index spectrum_id peptide is_target run calcmass expmass retention_time charge mokapot score mokapot q-value mokapot PEP protein_list 49014 7843 KFIDTTSKF True NCI_RA007_Epitope_Rep4 1085.57571087973 1085.57460993586 36.868 2 0.5420044727557871 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 40674 5121 HTLNQIDSVK True NCI_RA007_Epitope_Rep2 1153.6091362663299 1153.60802993586 24.543 2 0.5226127520158448 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 53921 6544 KYINTDAKF True NCI_RA007_Epitope_Rep4 1098.5709598524597 1098.5698699358602 31.784 2 0.45115327134346767 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 54445 16059 KYTKIFNDF True PC9_epitope_Rep5 1174.60225998074 1174.60116993586 66.76 2 0.42246470842749634 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 52664 8570 KQFEKQVEL True PC9_epitope_Rep5 1147.6237237013097 1147.62262993586 37.906 2 0.4214179248634437 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 53592 5774 KVVEGSFVYK True NCI_RA007_Epitope_Rep3 1154.6335601090198 1154.6324699358602 29.693 2 0.4145113253375675 0.00036105427849320016 0.9438714419765777 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 53293 4748 KTLDAEVVEK True NCI_RA007_Epitope_Rep4 1130.6183039676998 1130.61720993586 24.696 2 0.40434280882932244 0.00036105427849320016 0.9438714419765777 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 53607 6857 KVVNPLFEK True NCI_RA007_Epitope_Rep5 1072.6280808057597 1072.6269899358601 33.059 2 0.4032694053922472 0.00036105427849320016 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 28790 17435 FTDEEVDELYR True PC9_epitope_Rep3 1414.6252398229399 1414.62414993586 72.237 2 0.3924802293789651 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 42102 12751 IEELQLIVNDK True NCI_RA007_Epitope_Rep2 1312.7238316654 1312.7227299358601 54.217 2 0.3918211234373181 0.00036105427849320016 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5'] 28924 8252 FTELAEDKENY True H1975_Epitope_Rep2 1357.60377610237 1357.6026699358601 36.695 2 0.38996079196639927 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 53604 6569 KVVNPLFEK True NCI_RA007_Epitope_Rep3 1072.6280808057597 1072.6269899358601 32.891 2 0.38968827805679945 0.00036105427849320016 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 49017 7418 KFIDTTSKF True NCI_RA007_Epitope_Rep5 1085.57571087973 1085.57460993586 35.211 2 0.38801864292899574 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 42100 12310 IEELQLIVNDK True H1975_Epitope_Rep1 1312.7238316654 1312.7227299358601 52.378 2 0.38549771438172037 0.00036105427849320016 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5'] 40879 6364 HVLVTLGEK True PC9_epitope_Rep6 994.58113061334 994.58002993586 33.058 2 0.3838207690803562 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 11310 7958 DETNYGIPQR True NCI_RA007_Epitope_Rep1 1191.5520153130299 1191.55090993586 34.948 2 0.38328259304417184 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 28784 11826 FTDEEVDELYR True NCI_RA007_Epitope_Rep1 1414.6252398229399 1414.62414993586 49.98 2 0.3817079759560089 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 21866 4788 ESEEYQERY True H1975_Epitope_Rep2 1231.49931103383 1231.4982099358601 23.505 2 0.37619273843168033 0.00036105427849320016 0.9438714419765777 ['ENST00000492316.5_1_6:30585621-30587787:+|nuORF', 'ENSG00000204568|ENST00000259873|MRPS18B'] 114866 5757 TTDNEISRTEY True H1975_Epitope_Rep2 1327.58918866739 1327.5880899358601 27.142 2 0.37573412671257267 0.00036105427849320016 0.9438714419765777 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF'] 38978 6881 HIYYITGETK True NCI_RA007_Epitope_Rep2 1223.6186383208699 1223.61754993586 31.383 2 0.3757261783459555 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 28785 11457 FTDEEVDELYR True NCI_RA007_Epitope_Rep2 1414.6252398229399 1414.62414993586 49.158 2 0.37492063677750476 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 83486 13167 QDGQFSVLFTK True NCI_RA007_Epitope_Rep1 1268.6401020414398 1268.63900993586 55.214 2 0.37483495997861366 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 73005 10043 NDEELNKLLGK True NCI_RA007_Epitope_Rep1 1271.6721304457099 1271.6710299358601 43.073 2 0.3747475273628247 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 53090 7290 KSDVEAIFSK True NCI_RA007_Epitope_Rep3 1122.5920892198599 1122.59098993586 35.785 2 0.37310735784231647 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 76872 7095 NVIGLQM[Oxidation]GTNR True NCI_RA007_Epitope_Rep2 1217.61865578465 1217.61754993586 32.221 2 0.3716192896373335 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 32961 6218 GISQEQM[Oxidation]QEFR True NCI_RA007_Epitope_Rep2 1367.6139643270296 1367.61286993586 28.794 2 0.3705957181820261 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 132355 14799 VYMDWYEKF True NCI_RA007_Epitope_Rep3 1279.5583465634297 1279.55724993586 65.634 2 0.3695603065578332 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 56137 11520 LDM[Oxidation]DSIIAEVK True NCI_RA007_Epitope_Rep1 1248.6271547796798 1248.62604993586 48.778 2 0.3672348525201158 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 12625 16621 DLEEFFSTVGK True H1975_Epitope_Rep3 1270.60813320682 1270.60702993586 69.437 2 0.3658437302563246 0.00036105427849320016 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 7447 6890 ASDKETYELRY True H1975_Epitope_Rep2 1373.64630962069 1373.64520993586 31.423 2 0.36435216236863227 0.00036105427849320016 0.9438714419765777 ['ENSG00000163584|ENST00000295830|RPL22L1'] 11382 6931 DFHVDEQTTVK True NCI_RA007_Epitope_Rep1 1317.62009487285 1317.61843490379 30.964 3 0.3640611139097973 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 49027 11626 KFIDTTSKF True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 49.734 2 0.36383054123217046 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 54439 14141 KYTKIFNDF True PC9_epitope_Rep2 1174.60225998074 1174.60116993586 59.664 2 0.3621165919730396 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 52148 13489 KLVIIESDLER True PC9_epitope_Rep2 1313.75546614685 1313.75383490379 57.171 3 0.3598547718894795 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 28792 17314 FTDEEVDELYR True PC9_epitope_Rep5 1414.6252398229399 1414.62414993586 71.6 2 0.3598389893340054 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 53596 5936 KVVEGSFVYK True NCI_RA007_Epitope_Rep5 1154.6335601090198 1154.6324699358602 29.518 2 0.3592542388507622 0.00036105427849320016 0.9438714419765777 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 49340 5064 KIDKYTEVLK True NCI_RA007_Epitope_Rep5 1235.7125387057101 1235.71090490379 26.18 3 0.35880067113432235 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF'] 94012 6846 RVQEAVESMVK True NCI_RA007_Epitope_Rep4 1274.66527124346 1274.66362490379 32.954 3 0.3585900199668694 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 83489 19452 QDGQFSVLFTK True PC9_epitope_Rep3 1268.6401020414398 1268.63900993586 80.049 2 0.35806164059236667 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 54368 10889 KYQIINEEF True NCI_RA007_Epitope_Rep3 1182.5920892198599 1182.59098993586 49.907 2 0.3568809427975716 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 45567 14207 ISGLIYEETR True PC9_epitope_Rep1 1179.6135529404298 1179.61244993586 59.47 2 0.3565579363589836 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 89703 4389 REYNWNVKNKA True NCI_RA007_Epitope_Rep4 1420.7211463267997 1420.71949490379 23.235 3 0.35542597685264793 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006712|Q8N7H5-3|PAF1', 'nc|ENSG00000006712|Q8N7H5-2|PAF1', 'ENSG00000006712|ENST00000221265|PAF1'] 43895 14604 ILDLISESPIK True NCI_RA007_Epitope_Rep2 1226.7122043525399 1226.7111099358601 61.471 2 0.35538127755725774 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 53573 5851 KVTEGSFVYK True NCI_RA007_Epitope_Rep4 1156.61282466444 1156.61172993586 29.129 2 0.3553233728823109 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 87454 4498 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 22.413 2 0.35483625587499606 0.00036105427849320016 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 11309 7343 DETNYGIPQR True H1975_Epitope_Rep3 1191.5520153130299 1191.55090993586 33.221 2 0.3546834836177715 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 112387 5685 TNEAQAIETAR True NCI_RA007_Epitope_Rep2 1202.58912909774 1202.58802993586 26.727 2 0.35467508553423993 0.00036105427849320016 0.9438714419765777 ['ENSG00000177889|ENST00000318066|UBE2N', 'nc|ENSG00000276380|Q5JXB2|UBE2NL'] 26401 4999 FIKVPQNQNGK True NCI_RA007_Epitope_Rep2 1271.6986199770697 1271.69698490379 24.069 3 0.3544401802476253 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 70957 11960 M[Oxidation]ENFVAFVDK True NCI_RA007_Epitope_Rep2 1214.5641606002998 1214.56306993586 51.124 2 0.3537789733720745 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 48393 3584 KEC[Carbamidomethyl]C[Carbamidomethyl]DKPLLEK True NCI_RA007_Epitope_Rep2 1418.6897722979995 1418.68813490379 18.59 3 0.35364857768843155 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 19970 5124 EM[Oxidation]EAELEDER True NCI_RA007_Epitope_Rep2 1265.5081618458098 1265.50706993586 24.554 2 0.35356729864653247 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 135118 11942 YAPELLYYANK True H1975_Epitope_Rep3 1343.6761531969898 1343.6750499358602 51.091 2 0.3525384794156302 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 53920 5942 KYINTDAKF True NCI_RA007_Epitope_Rep3 1098.5709598524597 1098.5698699358602 30.353 2 0.35232865403192903 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 823 8058 ADDADEFGYSR True NCI_RA007_Epitope_Rep1 1244.4945600065598 1244.49346993586 35.34 2 0.35198740473314577 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 53432 11520 KVIDDTNITRL True PC9_epitope_Rep4 1286.7194149913 1286.71777490379 52.074 3 0.3518249708999621 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 90431 14420 RIQLVEEELDR True PC9_epitope_Rep5 1398.7466923682998 1398.74503490379 60.466 3 0.35173523458587236 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 87710 13247 QVEEADDWLRY True H1975_Epitope_Rep2 1422.6415585934199 1422.6404699358602 56.083 2 0.351320018847941 0.00036105427849320016 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 56138 11743 LDM[Oxidation]DSIIAEVK True NCI_RA007_Epitope_Rep1 1248.6271547796798 1248.62604993586 49.655 2 0.3511560927086922 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 127643 5382 VREEEIEVDSR True NCI_RA007_Epitope_Rep1 1359.6630223139898 1359.66136490379 25.012 3 0.3510845098167902 0.00036105427849320016 0.9438714419765777 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENST00000477977.1_1_10:103920762-103923575:+|nuORF'] 48391 3167 KEC[Carbamidomethyl]C[Carbamidomethyl]DKPLLEK True NCI_RA007_Epitope_Rep2 1418.6897722979995 1418.68813490379 16.962 3 0.3505875709944326 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 53741 12265 KYELDFSHF True NCI_RA007_Epitope_Rep4 1184.55022440788 1184.54912993586 54.173 2 0.3504647421419779 0.00036105427849320016 0.9438714419765777 ['ENSG00000137462|ENST00000642700|TLR2'] 132353 15751 VYMDWYEKF True NCI_RA007_Epitope_Rep1 1279.5583465634297 1279.55724993586 65.364 2 0.35045637897166226 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 38979 6511 HIYYITGETK True NCI_RA007_Epitope_Rep4 1223.6186383208699 1223.61754993586 31.65 2 0.3497639998325849 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 40808 8129 HVIETLIGK True NCI_RA007_Epitope_Rep4 1008.5967806774798 1008.59568993586 38.059 2 0.34935392230507395 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 138912 7581 YSEDLSDM[Oxidation]HY True H1975_Epitope_Rep2 1274.47613344154 1274.4750299358602 34.113 2 0.3492527529912053 0.00036105427849320016 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 56980 11014 LEEDEEELFK True NCI_RA007_Epitope_Rep1 1279.58197802863 1279.5808899358601 46.837 2 0.34877080798151805 0.00036105427849320016 0.9438714419765777 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF', 'ENST00000435265.5_1_22:20106640-20110140:+|nuORF'] 53572 5763 KVTEGSFVYK True NCI_RA007_Epitope_Rep4 1156.61282466444 1156.61172993586 28.787 2 0.34826585432336704 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 93598 4860 RSYHLQIVTK True NCI_RA007_Epitope_Rep5 1243.7037053575098 1243.70206490379 25.385 3 0.3475761513856309 0.00036105427849320016 0.9438714419765777 ['ENSG00000131203|ENST00000518237|IDO1'] 67145 4980 LTDEEVEM[Oxidation]TR True H1975_Epitope_Rep3 1237.54963273497 1237.5485299358602 24.283 2 0.3474540264570858 0.00036105427849320016 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA'] 57436 12941 LEINFNTLQTK True NCI_RA007_Epitope_Rep1 1319.7085159544301 1319.7074099358601 54.329 2 0.3472316034273904 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 21868 5045 ESEEYQERY True H1975_Epitope_Rep2 1231.49931103383 1231.4982099358601 24.487 2 0.34706551445221484 0.00036105427849320016 0.9438714419765777 ['ENST00000492316.5_1_6:30585621-30587787:+|nuORF', 'ENSG00000204568|ENST00000259873|MRPS18B'] 139300 18840 YTDLLRLFEY True H1975_Epitope_Rep3 1331.67615319699 1331.6750499358602 79.021 2 0.3465711550247651 0.00036105427849320016 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB'] 113049 16308 TPVLFDIYEIK True H1975_Epitope_Rep1 1336.72785441668 1336.7267499358602 68.086 2 0.346222942112419 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 108744 13399 TENLLGSYFPK True H1975_Epitope_Rep3 1267.64485306871 1267.6437499358601 56.806 2 0.3459868820069358 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1', 'ENST00000561059.5_1_14:24606216-24606483:+|nuORF', 'ENST00000561142.5_1_14:24605441-24607359:+|nuORF'] 56061 16183 LDLDGIIAEVK True H1975_Epitope_Rep1 1184.66525416012 1184.66414993586 67.593 2 0.34598529310109494 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 7445 6883 ASDKETYELRY True H1975_Epitope_Rep2 1373.64630962069 1373.64466490379 31.396 3 0.3457262962420385 0.00036105427849320016 0.9438714419765777 ['ENSG00000163584|ENST00000295830|RPL22L1'] 48392 3251 KEC[Carbamidomethyl]C[Carbamidomethyl]DKPLLEK True NCI_RA007_Epitope_Rep2 1418.6897722979995 1418.68813490379 17.3 3 0.3457243674533222 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 53981 18279 KYLDEDTIYHL True PC9_epitope_Rep1 1408.68744615668 1408.68580490379 75.099 3 0.34562102181177035 0.00036105427849320016 0.9438714419765777 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 53430 12136 KVIDDTNITRL True PC9_epitope_Rep2 1286.7194149913 1286.71777490379 51.991 3 0.3456004393409435 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 94010 6296 RVQEAVESMVK True NCI_RA007_Epitope_Rep3 1274.66527124346 1274.66362490379 31.768 3 0.3455115232448047 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 51992 9686 KLDVQFSGLTK True NCI_RA007_Epitope_Rep2 1234.6921376142998 1234.69104993586 42.294 2 0.3454568896869076 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 90430 14494 RIQLVEEELDR True PC9_epitope_Rep1 1398.7466923682998 1398.74503490379 60.576 3 0.34512904420379925 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 53985 18162 KYLDEDTIYHL True PC9_epitope_Rep5 1408.68744615668 1408.68580490379 74.869 3 0.34509893247236373 0.00036105427849320016 0.9438714419765777 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 73006 9762 NDEELNKLLGK True NCI_RA007_Epitope_Rep2 1271.6721304457099 1271.6710299358601 42.592 2 0.34435298926266356 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 53108 5675 KSFDTSLIRK True NCI_RA007_Epitope_Rep4 1193.67682190333 1193.6751749037899 28.434 3 0.34414844185094834 0.00036105427849320016 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 83490 18302 QDGQFSVLFTK True PC9_epitope_Rep4 1268.6401020414398 1268.63900993586 78.467 2 0.34390352783751693 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 53123 7355 KSIDFPLTK True NCI_RA007_Epitope_Rep3 1047.59644632431 1047.5953499358602 36.055 2 0.34373508574310124 0.00036105427849320016 0.9438714419765777 ['ENSG00000084073|ENST00000372759|ZMPSTE24'] 43553 5844 IIEDQQESLNK True NCI_RA007_Epitope_Rep1 1315.6619596848298 1315.66086993586 26.784 2 0.3435280390457534 0.00036105427849320016 0.9438714419765777 ['ENSG00000138385|ENST00000260956|SSB'] 94016 6496 RVQEAVESMVK True NCI_RA007_Epitope_Rep5 1274.66527124346 1274.66362490379 31.653 3 0.343512765230655 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 53569 5260 KVTEGSFVYK True NCI_RA007_Epitope_Rep3 1156.61282466444 1156.61172993586 27.694 2 0.34324597517067296 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 16368 5078 EELEEEQRTEE True NCI_RA007_Epitope_Rep1 1419.6001472739097 1419.5990499358602 23.836 2 0.34311441430930756 0.00036105427849320016 0.9438714419765777 ['ENSG00000182534|ENST00000449428|MXRA7'] 134769 10727 WYDNEFGYSNR True H1975_Epitope_Rep3 1449.5949427541698 1449.5938499358601 46.339 2 0.34249600361405264 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 28787 17425 FTDEEVDELYR True PC9_epitope_Rep1 1414.6252398229399 1414.62414993586 71.821 2 0.34247213999189163 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 14099 5897 DSDSMEDTGHY True H1975_Epitope_Rep2 1255.42991114467 1255.42880993586 27.668 2 0.3421283997204899 0.00036105427849320016 0.9438714419765777 ['ENSG00000132716|ENST00000368074|DCAF8', 'nc|ENSG00000132716|Q5TAQ9-2|DCAF8'] 108376 8498 TEDQFIRTP True H1975_Epitope_Rep3 1105.54038800017 1105.53928993586 37.673 2 0.3420930899754954 0.00036105427849320016 0.9438714419765777 ['ENSG00000062822|ENST00000440232|POLD1'] 53765 10370 KYFDEHYEY True PC9_epitope_Rep6 1292.53496826656 1292.5338699358601 50.609 2 0.34204610058437174 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 89024 7506 REEEEDFIRAA True H1975_Epitope_Rep3 1363.6368075661499 1363.6351649037902 33.853 3 0.34167028067373456 0.00036105427849320016 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4'] 112592 13406 TPAQFDADELR True PC9_epitope_Rep1 1261.5938801250097 1261.59278993586 56.428 2 0.34146848874027164 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 20918 6592 EQVANSAFVER True NCI_RA007_Epitope_Rep5 1248.6098645423197 1248.6087699358602 32.016 2 0.3412439874017818 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 37533 20389 GYLPNQLFRTF True PC9_epitope_Rep4 1354.70337100434 1354.7022699358602 86.571 2 0.34117374963600555 0.00036105427849320016 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 41313 11513 IAIDTIINQK True NCI_RA007_Epitope_Rep1 1127.6550238295902 1127.65392993586 48.75 2 0.34111238107781156 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 138767 10451 YSDDGQKWTVY True H1975_Epitope_Rep2 1360.5935457718401 1360.59244993586 45.215 2 0.3409978184920778 0.00036105427849320016 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2'] 105978 8664 SVLIQKQIFK True NCI_RA007_Epitope_Rep4 1202.7386938838997 1202.7375899358601 40.111 2 0.3406965788971294 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000528833.1_1_11:9431619-9435997:+|nuORF'] 89469 9645 REQFNEFRDL True H1975_Epitope_Rep2 1352.6473126801998 1352.64565490379 42.078 3 0.34057929492127303 0.00036105427849320016 0.9438714419765777 ['ENSG00000049449|ENST00000054950|RCN1', 'nc|ENSG00000049449|Q15293-2|RCN1'] 45494 9352 ISEQTGKELLY True H1975_Epitope_Rep2 1279.66598243611 1279.6648899358602 40.933 2 0.3404990853375232 0.00036105427849320016 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 85398 6845 QLEEQLDNETK True NCI_RA007_Epitope_Rep1 1345.63613885981 1345.63504993586 30.63 2 0.3401927137822523 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 53283 6428 KTIVFVETK True NCI_RA007_Epitope_Rep4 1063.62774645259 1063.62664993586 31.326 2 0.34005396968872215 0.00036105427849320016 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 114802 15644 TTDDWKDFLY True H1975_Epitope_Rep2 1302.57683307854 1302.5757299358602 65.331 2 0.33962476634614525 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 7448 6995 ASDKETYELRY True H1975_Epitope_Rep2 1373.64630962069 1373.64520993586 31.829 2 0.33959443280728874 0.00036105427849320016 0.9438714419765777 ['ENSG00000163584|ENST00000295830|RPL22L1'] 19271 12800 ELLLQPVTISR True H1975_Epitope_Rep1 1267.74998684359 1267.74888993586 54.299 2 0.33953086681950934 0.00036105427849320016 0.9438714419765777 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'nc|ENSG00000241553|P59998-2|ARPC4'] 110733 6801 TKFETEQAL True NCI_RA007_Epitope_Rep3 1065.5342399905699 1065.5331499358601 33.857 2 0.33946466584045704 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'chr17:16843820-16844252|422|10.65|0.55|4.27|-|1|KRT17P1,KRT17P1|1', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 68368 15035 LTSMVDDMWHY True H1975_Epitope_Rep2 1396.579158661 1396.5780699358602 62.984 2 0.3394277641328113 0.00036105427849320016 0.9438714419765777 ['ENST00000569980.1_1_16:57492139-57494533:+|nuORF', 'ENSG00000088682|ENST00000262507|COQ9'] 2838 16586 [Acetylation]-AEVQVLVLDGR True H1975_Epitope_Rep1 1239.68230152289 1239.6812099358601 69.176 2 0.33918773231998955 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000479992.5_1_19:49990877-49993604:+|nuORF', 'ENST00000472481.5_1_19:49990877-49994169:+|nuORF'] 97123 11596 SFELFADKVPK True NCI_RA007_Epitope_Rep2 1279.68123857743 1279.68014993586 49.696 2 0.3391591712988647 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA'] 54436 10036 KYTKIFNDF True NCI_RA007_Epitope_Rep4 1174.60225998074 1174.60116993586 45.446 2 0.3383969881429531 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 116751 13131 TYLEKAIKI True PC9_epitope_Rep2 1077.6433965167298 1077.6422899358602 55.781 2 0.3383890992670133 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 89183 3352 REIEDPEDRKP True H1975_Epitope_Rep2 1382.6790067312995 1382.67736490379 17.611 3 0.33802147313849407 0.00036105427849320016 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'nc|ENSG00000127022|P27824-3|CANX'] 138913 7684 YSEDLSDM[Oxidation]HY True H1975_Epitope_Rep2 1274.47613344154 1274.4750299358602 34.508 2 0.33788391281407865 0.00036105427849320016 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 19685 16600 ELSDFISYLQR True H1975_Epitope_Rep1 1369.68778050985 1369.6866899358602 69.229 2 0.3378007162627324 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 32213 14712 GFGFVTFDDHD True H1975_Epitope_Rep1 1255.51456717515 1255.51346993586 61.808 2 0.3377280413689688 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 28782 11198 FTDEEVDELYR True H1975_Epitope_Rep1 1414.6252398229399 1414.62414993586 48.042 2 0.33760898824647506 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 93871 8040 RVFVVGVGMTK True NCI_RA007_Epitope_Rep3 1191.67979910879 1191.67816490379 38.714 3 0.3375590184501232 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 104342 9052 SSEVIKDANLY True H1975_Epitope_Rep2 1237.6190322436898 1237.61792993586 39.771 2 0.3374998424565241 0.00036105427849320016 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 74569 10786 NLDEEKQLLY True H1975_Epitope_Rep2 1263.63468230783 1263.63358993586 46.516 2 0.3372137394488585 0.00036105427849320016 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 16005 9153 EEAENTLQSFR True NCI_RA007_Epitope_Rep1 1322.61025846514 1322.60916993586 39.605 2 0.3371311937003992 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 12997 13337 DLQFVEVTDVK True NCI_RA007_Epitope_Rep2 1291.6659824361102 1291.6648899358602 56.516 2 0.336691104212903 0.00036105427849320016 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 7830 10585 [Acetylation]-ATAEVLNIGKK True NCI_RA007_Epitope_Rep1 1184.6764878664596 1184.67538993586 45.158 2 0.33511576589652153 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 21867 4906 ESEEYQERY True H1975_Epitope_Rep2 1231.49931103383 1231.4982099358601 23.954 2 0.33500465635087096 0.00036105427849320016 0.9438714419765777 ['ENST00000492316.5_1_6:30585621-30587787:+|nuORF', 'ENSG00000204568|ENST00000259873|MRPS18B'] 40785 7336 HVGDEDFVHLR True H1975_Epitope_Rep1 1322.6367479965 1322.63509490379 33.228 3 0.33487955432686506 0.00036105427849320016 0.9438714419765777 ['ENSG00000160213|ENST00000291568|CSTB'] 93934 4923 RVLEKDSVTLK True NCI_RA007_Epitope_Rep4 1286.7558005000199 1286.75416490379 25.397 3 0.3347139477111109 0.00036105427849320016 0.9438714419765777 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENST00000476031.1_1_1:161515507-161519517:-|nuORF'] 28783 11206 FTDEEVDELYR True H1975_Epitope_Rep3 1414.6252398229399 1414.62414993586 48.202 2 0.33452330868053254 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 55465 15010 LAVDAVIAELK True H1975_Epitope_Rep1 1140.675424921 1140.6743299358602 62.982 2 0.3343813855605547 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 54325 13088 KYQDILNEI True NCI_RA007_Epitope_Rep4 1134.5920892198599 1134.59098993586 57.443 2 0.33419021028766027 0.00036105427849320016 0.9438714419765777 ['ENSG00000145703|ENST00000274364|IQGAP2', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 37887 6713 HEAM[Oxidation]ITDLEER True NCI_RA007_Epitope_Rep2 1358.6136299738598 1358.61252993586 30.724 2 0.33348082659504485 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 14623 8693 DVLLQVDDERR True NCI_RA007_Epitope_Rep1 1356.69974217588 1356.69808490379 37.815 3 0.33318485768014966 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 53926 7575 KYINTDAKF True PC9_epitope_Rep4 1098.5709598524597 1098.5698699358602 36.515 2 0.3330915256158424 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 14041 11869 DSDFEYSTQSY True H1975_Epitope_Rep2 1340.50445598392 1340.5033499358601 50.732 2 0.3327042737192092 0.00036105427849320016 0.9438714419765777 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 13711 19891 DQIAKYWEL True PC9_epitope_Rep4 1164.5815245361598 1164.5804299358601 84.643 2 0.3322660777066717 0.00036105427849320016 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 32135 19496 GFAFVQYVNER True PC9_epitope_Rep2 1328.65133543148 1328.6502299358601 80.374 2 0.33161143998543174 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC'] 89021 7542 REEEEDFIRAA True H1975_Epitope_Rep2 1363.6368075661499 1363.6351649037902 33.961 3 0.33150065052175265 0.00036105427849320016 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4'] 7444 6853 ASDKETYELRY True H1975_Epitope_Rep1 1373.64630962069 1373.64466490379 31.404 3 0.33149404547122724 0.00036105427849320016 0.9438714419765777 ['ENSG00000163584|ENST00000295830|RPL22L1'] 42549 14324 IESLIAVFQK True H1975_Epitope_Rep3 1146.6648602373 1146.66376993586 60.444 2 0.33137022949237604 0.00036105427849320016 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 28445 8057 FSELAEDKENY True H1975_Epitope_Rep2 1343.5881260382298 1343.58702993586 35.94 2 0.33135159176053824 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 140431 19919 YYFEGIKQTF True PC9_epitope_Rep5 1294.6233893481397 1294.6222899358602 81.673 2 0.331340691595676 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 139264 9649 YTDFDGTRVY True H1975_Epitope_Rep1 1235.54586730343 1235.5447699358601 42.043 2 0.3306333828086314 0.00036105427849320016 0.9438714419765777 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 135248 12393 YAYDGKDYLAL True NCI_RA007_Epitope_Rep4 1290.6132185872598 1290.6121299358601 54.665 2 0.33060330355208173 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 67589 10067 LTETIYKNYY True H1975_Epitope_Rep2 1306.64451871554 1306.64342993586 43.715 2 0.3303052777598206 0.00036105427849320016 0.9438714419765777 ['ENSG00000146834|ENST00000310512|MEPCE', 'nc|ENSG00000289690|Q7L2J0-2|MEPCE'] 43893 14063 ILDLISESPIK True H1975_Epitope_Rep3 1226.7122043525399 1226.7111099358601 59.417 2 0.3301751364417704 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 135254 19004 YAYDGKDYLAL True PC9_epitope_Rep2 1290.6132185872598 1290.6121299358601 78.464 2 0.33010699194243476 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 2342 5404 AEQEEEVQRAV True H1975_Epitope_Rep2 1286.61025846514 1286.60916993586 25.819 2 0.32953958220396395 0.00036105427849320016 0.9438714419765777 ['ENST00000531121.5_1_11:65686926-65687405:+|nuORF'] 53986 18171 KYLDEDTIYHL True PC9_epitope_Rep5 1408.68744615668 1408.68634993586 74.904 2 0.3295011868760358 0.00036105427849320016 0.9438714419765777 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 60785 4669 LKGDDLQAIKK True NCI_RA007_Epitope_Rep2 1227.7186867153098 1227.71704490379 22.787 3 0.3294979451496136 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 139299 18761 YTDLLRLFEY True H1975_Epitope_Rep3 1331.67615319699 1331.6750499358602 78.682 2 0.3294293316680811 0.00036105427849320016 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB'] 18896 16177 ELENFFQELEK True H1975_Epitope_Rep3 1424.6823607762396 1424.6812699358602 67.681 2 0.32940612763378374 0.00036105427849320016 0.9438714419765777 ['ENSG00000172137|ENST00000302628|CALB2'] 14996 13162 DYTYEELLNR True NCI_RA007_Epitope_Rep2 1314.6091958359798 1314.60808993586 55.83 2 0.3293430283439649 0.00036105427849320016 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 89019 7360 REEEEDFIRAA True H1975_Epitope_Rep1 1363.6368075661499 1363.6351649037902 33.317 3 0.32927300871662357 0.00036105427849320016 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4'] 10057 8905 AYVHMVTHF True NCI_RA007_Epitope_Rep4 1103.52223583823 1103.52167496793 41.084 1 0.3290410444701311 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 18895 16172 ELENFFQELEK True H1975_Epitope_Rep1 1424.6823607762396 1424.6812699358602 67.552 2 0.328976911168818 0.00036105427849320016 0.9438714419765777 ['ENSG00000172137|ENST00000302628|CALB2'] 7450 6977 ASDKETYELRY True H1975_Epitope_Rep3 1373.64630962069 1373.64520993586 31.798 2 0.3289407431149816 0.00036105427849320016 0.9438714419765777 ['ENSG00000163584|ENST00000295830|RPL22L1'] 822 7349 ADDADEFGYSR True H1975_Epitope_Rep3 1244.4945600065598 1244.49346993586 33.246 2 0.3288356654626017 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 28789 16822 FTDEEVDELYR True PC9_epitope_Rep2 1414.6252398229399 1414.62414993586 69.954 2 0.3280332184867583 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 104268 11435 SSDTADFRDLY True H1975_Epitope_Rep2 1288.55716026312 1288.55606993586 49.037 2 0.3279721375582272 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 43554 5729 IIEDQQESLNK True NCI_RA007_Epitope_Rep2 1315.6619596848298 1315.66086993586 26.901 2 0.3279269796822717 0.00036105427849320016 0.9438714419765777 ['ENSG00000138385|ENST00000260956|SSB'] 71802 13971 M[Oxidation]NSFVNDIFER True NCI_RA007_Epitope_Rep2 1386.62380073474 1386.62270993586 59.001 2 0.3279122810465873 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 93596 4741 RSYHLQIVTK True NCI_RA007_Epitope_Rep3 1243.7037053575098 1243.70206490379 25.601 3 0.32758975716605127 0.00036105427849320016 0.9438714419765777 ['ENSG00000131203|ENST00000518237|IDO1'] 53481 8260 KVLDAIIQEK True NCI_RA007_Epitope_Rep4 1155.68632395787 1155.6852299358602 38.581 2 0.32746989347972727 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 46208 14159 ITDLPDHLLSY True H1975_Epitope_Rep2 1285.6554177524101 1285.65432993586 59.616 2 0.32722583068444044 0.00036105427849320016 0.9438714419765777 ['ENST00000406829.2_2_7:7812042-7917166:+|nuORF', 'ENSG00000219545|ENST00000682710|UMAD1'] 52168 7166 KLYDIDVAK True NCI_RA007_Epitope_Rep5 1063.5913609438699 1063.59026993586 34.239 2 0.3271958844277384 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 109291 9810 TGEAFVQFASK True H1975_Epitope_Rep1 1183.5873381925896 1183.58624993586 42.662 2 0.32713044364246885 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'ENST00000469172.5_1_10:70097616-70097877:+|nuORF'] 89020 7433 REEEEDFIRAA True H1975_Epitope_Rep2 1363.6368075661499 1363.6351649037902 33.536 3 0.32708308281390863 0.00036105427849320016 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4'] 48876 6475 KESYSVYVYK True NCI_RA007_Epitope_Rep3 1264.6339540318397 1264.63231490379 32.5 3 0.3270615680011664 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 94391 8595 RYFDPANGKF True NCI_RA007_Epitope_Rep5 1213.5880068989297 1213.58635490379 39.738 3 0.32705202170938424 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 138987 8386 YSEYPPFSHRY True H1975_Epitope_Rep2 1444.6411646706 1444.63951490379 37.21 3 0.3266874958198578 0.00036105427849320016 0.9438714419765777 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 139411 6934 YTEFTPTEKDE True H1975_Epitope_Rep3 1358.5877916850598 1358.58668993586 31.633 2 0.3263728212225397 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 139296 18947 YTDLLRLFEY True H1975_Epitope_Rep1 1331.67615319699 1331.6750499358602 79.001 2 0.32635540991827167 0.00036105427849320016 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB'] 35742 5484 GTTHNFLYK True NCI_RA007_Epitope_Rep4 1079.5399940773498 1079.5388899358602 27.679 2 0.3262127693217097 0.00036105427849320016 0.9438714419765777 ['ENST00000599239.5_1_19:48565437-48599986:-|nuORF', 'ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'PLA2G4C|p.I518Sfs*2|1|0.08|ENSG00000105499|chr19:48053015-48053024|TCTCTAAGGA/-|frameshift_variant', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C'] 13928 17066 DRFFSEYEKL True PC9_epitope_Rep4 1332.6350166609998 1332.6333749037901 73.643 3 0.32604879431364 0.00036105427849320016 0.9438714419765777 ['ENSG00000135932|ENST00000258418|CAB39'] 56072 12033 LDLEIATYR True NCI_RA007_Epitope_Rep2 1092.58152453616 1092.5804299358601 51.398 2 0.32593997894010496 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 117634 10384 VAIEHLDKI True PC9_epitope_Rep4 1036.59169529704 1036.5905899358602 47.643 2 0.3259376913330249 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 52722 14020 KQLDDLKVEL True PC9_epitope_Rep4 1199.6761531969898 1199.6750499358602 61.839 2 0.3258616509532874 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 39359 8631 HLVDEPQNLIK True NCI_RA007_Epitope_Rep1 1304.7088503076 1304.7072149037901 37.574 3 0.3257384165895967 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 68097 9036 LTPEEEEILNK True H1975_Epitope_Rep1 1313.6714617393698 1313.6703699358602 39.664 2 0.3256296140217684 0.00036105427849320016 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 112588 8794 TPAQFDADELR True H1975_Epitope_Rep1 1261.5938801250097 1261.59278993586 38.754 2 0.3253337608761594 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 17437 8291 EHFQDDVFNEK True NCI_RA007_Epitope_Rep1 1406.6102584651396 1406.6086049037901 36.251 3 0.3253249937388736 0.00036105427849320016 0.9438714419765777 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 53244 4319 KTFEGNLTTK True NCI_RA007_Epitope_Rep4 1137.6029882567298 1137.60133490379 22.957 3 0.325260760552876 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 70273 6517 LYNYYDDEKEK True NCI_RA007_Epitope_Rep1 1478.6565399512199 1478.6548949037901 29.364 3 0.32525235485384935 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 83487 13017 QDGQFSVLFTK True NCI_RA007_Epitope_Rep2 1268.6401020414398 1268.63900993586 55.258 2 0.3252412428713235 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 48880 6687 KESYSVYVYK True NCI_RA007_Epitope_Rep5 1264.6339540318397 1264.6328499358601 32.391 2 0.3252183223120601 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 67394 12867 LTDYFLKDEY True H1975_Epitope_Rep2 1305.61288423409 1305.61178993586 54.605 2 0.3250723154797735 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF'] 137142 14022 YLDLKSDEWEY True H1975_Epitope_Rep2 1459.6507262947903 1459.64962993586 59.085 2 0.3249524076767348 0.00036105427849320016 0.9438714419765777 ['ENSG00000166170|ENST00000299204|BAG5', 'nc|ENSG00000166170|Q9UL15-2|BAG5'] 131252 10161 VVQDGITLITK True NCI_RA007_Epitope_Rep4 1185.69688864157 1185.6957899358601 45.942 2 0.3249475402048059 0.00036105427849320016 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 24841 6626 FDDAVVQSDM[Oxidation]K True NCI_RA007_Epitope_Rep2 1269.55471811541 1269.55362993586 30.384 2 0.3249352877409429 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000533238.5_1_11:122929516-122932032:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 95844 4937 [Acetylation]-SDKPDM[Oxidation]AEIEK True NCI_RA007_Epitope_Rep2 1319.5914978632497 1319.59038993586 23.825 2 0.32489903931894193 0.00036105427849320016 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 76554 10862 NTDPWAGYRY True H1975_Epitope_Rep3 1241.5465360097699 1241.54542993586 46.863 2 0.3248408902457342 0.00036105427849320016 0.9438714419765777 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 85359 6533 QLDSAQKNLY True H1975_Epitope_Rep2 1178.59315184902 1178.5920499358601 30.04 2 0.32466841093255466 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000251192|Q2M3X9-2|ZNF674', 'ENSG00000251192|ENST00000683375|ZNF674', 'nc|ENSG00000251192|Q2M3X9|ZNF674', 'ENST00000521626.5_1_X:46382546-46401540:-|nuORF', 'nc|ENSG00000147121|Q5JUW0-2|KRBOX4', 'ENSG00000147121|ENST00000344302|KRBOX4', 'ENST00000453909.3_1_X:46387515-46388371:-|nuORF', 'ENST00000522017.5_1_X:46382546-46401540:-|nuORF', 'nc|ENSG00000147121|Q5JUW0-3|KRBOX4'] 52098 4789 KLNEVIVNK True NCI_RA007_Epitope_Rep4 1055.63389446219 1055.63278993586 24.856 2 0.3245551496366947 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6'] 48873 7271 KESYSVYVYK True NCI_RA007_Epitope_Rep1 1264.6339540318397 1264.6328499358601 32.273 2 0.3244720104093701 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 39343 9969 HLTDAYFK True PC9_epitope_Rep5 993.49198125577 993.49088993586 43.322 2 0.3243955346576518 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 40988 11510 HYDPTINKW True PC9_epitope_Rep5 1172.56145779792 1172.56036993586 49.27 2 0.3241506259146994 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 54355 16467 KYQEVTNNLEF True PC9_epitope_Rep1 1383.6670450652698 1383.66594993586 68.165 2 0.32404990913114157 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 73023 14168 NDEELNKLLGK True PC9_epitope_Rep5 1271.6721304457099 1271.6710299358601 59.508 2 0.32391900407355734 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 139344 3984 YTDSSYEEKKY True H1975_Epitope_Rep3 1411.61434078607 1411.61269490379 20.451 3 0.32385863616165295 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 28927 7254 FTENDKEYQEY True H1975_Epitope_Rep2 1464.6045043783597 1464.60340993586 32.837 2 0.32372179605261636 0.00036105427849320016 0.9438714419765777 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 49360 5907 KIFVGGIKEN True NCI_RA007_Epitope_Rep3 1103.6338944621898 1103.63278993586 30.21 2 0.3235468545937595 0.00036105427849320016 0.9438714419765777 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 93837 7461 RVFAAESIIKR True NCI_RA007_Epitope_Rep4 1288.7615545868 1288.7599049037901 35.344 3 0.3235208689340625 0.00036105427849320016 0.9438714419765777 ['ENST00000469420.1_1_22:39267340-39268216:-|nuORF', 'ENSG00000183741|ENST00000407418|CBX6'] 125628 12609 VM[Oxidation]ENFVAFVDK True NCI_RA007_Epitope_Rep1 1313.6325745132897 1313.6314699358602 53.027 2 0.3234437207890161 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 77255 16468 NYIPRFWTF True NCI_RA007_Epitope_Rep3 1242.6185787512197 1242.61748993586 72.554 2 0.32343757246025606 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 26587 6790 FKDLGEENFK True NCI_RA007_Epitope_Rep3 1225.5979028762897 1225.5962549037902 33.815 3 0.32330356268910027 0.00036105427849320016 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 40441 6551 HSDLLEDSKY True H1975_Epitope_Rep2 1205.55643198713 1205.55532993586 30.109 2 0.32325298796164037 0.00036105427849320016 0.9438714419765777 ['ENSG00000171428|ENST00000307719|NAT1'] 132130 6616 VYISEHEHF True NCI_RA007_Epitope_Rep3 1159.5298233164701 1159.5287299358602 33.084 2 0.32323091605291115 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 83483 12578 QDGQFSVLFTK True H1975_Epitope_Rep3 1268.6401020414398 1268.63900993586 53.583 2 0.3228955779210712 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 94009 6205 RVQEAVESMVK True NCI_RA007_Epitope_Rep3 1274.66527124346 1274.66362490379 31.414 3 0.3228656345320491 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 76324 6732 NSEEMKEAYY True H1975_Epitope_Rep3 1262.5125185698198 1262.5114299358602 30.849 2 0.32279044409499946 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 49037 9092 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 45.055 2 0.3227504476628202 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 117631 10940 VAIEHLDKI True PC9_epitope_Rep2 1036.59169529704 1036.5905899358602 47.4 2 0.32270510175481626 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 19973 8848 EMEAELEDER True PC9_epitope_Rep4 1249.5132468458098 1249.5121499358602 41.565 2 0.3225739415487681 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 43894 14480 ILDLISESPIK True NCI_RA007_Epitope_Rep1 1226.7122043525399 1226.7111099358601 60.369 2 0.32226073322354415 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 73929 16781 NHIEPLKIQL True PC9_epitope_Rep5 1203.6975573479099 1203.69646993586 69.554 2 0.32210567514450067 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 131993 20039 VYGNERFIQYL True PC9_epitope_Rep2 1400.7088503075997 1400.7077499358602 82.483 2 0.3219604520862704 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000528411.1_1_11:85734561-85780352:-|nuORF'] 94385 9174 RYFDPANGKF True NCI_RA007_Epitope_Rep2 1213.5880068989297 1213.5869099358601 40.293 2 0.32184092508233064 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 71801 14162 M[Oxidation]NSFVNDIFER True NCI_RA007_Epitope_Rep1 1386.62380073474 1386.62270993586 59.121 2 0.32169548931952335 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 89180 5203 REIDVRLDRNA True H1975_Epitope_Rep3 1355.7269599832298 1355.7253049037902 25.103 3 0.32159341584998796 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104177|Q9P2K5-3|MYEF2', 'nc|ENSG00000104177|Q9P2K5-2|MYEF2', 'nc|ENSG00000104177|Q9P2K5|MYEF2', 'ENSG00000104177|ENST00000324324|MYEF2'] 41317 22404 IAIYELLFK True PC9_epitope_Rep1 1108.6532329244399 1108.65212993586 90.996 2 0.3215735322976679 0.00036105427849320016 0.9438714419765777 ['ENSG00000124614|ENST00000648437|RPS10', 'chr6:34425221-34425583|502|33.66|0.0|21.68|-|ENST00000494077|RPS10-NUDT3,RPS10'] 9063 15095 AVIVLVENFYK True NCI_RA007_Epitope_Rep4 1293.7332741502898 1293.7321699358602 65.628 2 0.3215251103708191 0.00036105427849320016 0.9438714419765777 ['ENST00000474991.1_1_1:153580188-153585458:-|nuORF', 'ENSG00000188643|ENST00000368706|S100A16'] 104871 4662 STESLQANVQR True NCI_RA007_Epitope_Rep5 1231.6156781987497 1231.61458993586 24.616 2 0.3213981047714692 0.00036105427849320016 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 42103 8395 IEELQNVQRVT True H1975_Epitope_Rep2 1327.70957858359 1327.7084899358601 37.244 2 0.32135009942348974 0.00036105427849320016 0.9438714419765777 ['ENSG00000166920|ENST00000396650|C15orf48'] 44407 9459 INEVENQILTR True NCI_RA007_Epitope_Rep2 1327.7095785835897 1327.7084899358601 41.405 2 0.3212943567202554 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 6403 14798 APSDLYQIILK True H1975_Epitope_Rep1 1259.7125387057101 1259.7114499358602 62.146 2 0.32122546990135925 0.00036105427849320016 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000527897.1_1_11:64953662-64954841:+|nuORF'] 73003 9203 NDEELNKLLGK True H1975_Epitope_Rep1 1271.6721304457099 1271.6710299358601 40.306 2 0.321118972112816 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 48592 5771 KEIEEYIHKP True H1975_Epitope_Rep1 1284.6714021697198 1284.66976490379 27.268 3 0.321106244643497 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 46074 14960 ISYGPDWKDFY True H1975_Epitope_Rep2 1389.6241176241301 1389.6230299358601 62.695 2 0.3210767294966951 0.00036105427849320016 0.9438714419765777 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000566672.5_1_15:72638574-72647950:-|nuORF'] 14154 15512 DSLIFLVDASK True H1975_Epitope_Rep1 1206.6496040959798 1206.6485099358601 64.94 2 0.32087312982663757 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000464116.2_1_22:42018008-42024264:+|nuORF'] 54117 11351 KYMEDYHQF True PC9_epitope_Rep5 1259.52810906431 1259.5270099358602 48.658 2 0.3207452889482486 0.00036105427849320016 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 73922 14893 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69646993586 65.226 2 0.320654368248819 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 135727 5635 YEKEEDWRNAA True H1975_Epitope_Rep2 1409.62115750201 1409.61952490379 26.674 3 0.32057486660353285 0.00036105427849320016 0.9438714419765777 ['ENSG00000138663|ENST00000264389|COPS4', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENST00000506443.5_1_4:83956377-83978089:+|nuORF'] 16003 8397 EEAENTLQSFR True H1975_Epitope_Rep3 1322.61025846514 1322.60916993586 37.282 2 0.3205212353550732 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 76390 9832 NSLESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep2 1318.5863525968596 1318.58524993586 42.869 2 0.32046495680320536 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 40584 13131 HTDDPLTWDY True H1975_Epitope_Rep3 1261.52513185885 1261.5240299358602 55.756 2 0.32041681422673446 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 46209 14251 ITDLPDHLLSY True H1975_Epitope_Rep2 1285.6554177524101 1285.65432993586 59.967 2 0.3203959330999391 0.00036105427849320016 0.9438714419765777 ['ENST00000406829.2_2_7:7812042-7917166:+|nuORF', 'ENSG00000219545|ENST00000682710|UMAD1'] 16008 8697 EEAENTLQSFR True NCI_RA007_Epitope_Rep2 1322.61025846514 1322.60916993586 38.477 2 0.32031107051370555 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 136107 14520 YGEPGEVFINK True PC9_epitope_Rep5 1251.6135529404298 1251.61244993586 60.85 2 0.32028696540345947 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 85389 5235 QLEEAEEEAQR True PC9_epitope_Rep4 1330.60008770426 1330.5989899358601 26.835 2 0.3202721059303667 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 39377 13120 HLVDEPQNLIK True PC9_epitope_Rep5 1304.7088503076 1304.7072149037901 55.471 3 0.32010636331282405 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 39342 6445 HLTDAYFK True NCI_RA007_Epitope_Rep5 993.49198125577 993.49088993586 31.458 2 0.31988985155823646 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 129428 14179 VTEITDDLHFY True H1975_Epitope_Rep2 1351.6295969273901 1351.6284899358602 59.692 2 0.31987645754501004 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 12624 16630 DLEEFFSTVGK True H1975_Epitope_Rep1 1270.60813320682 1270.60702993586 69.347 2 0.31978236782381325 0.00036105427849320016 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 48280 9014 KDLEALLNSK True NCI_RA007_Epitope_Rep2 1129.63428838501 1129.6331899358602 39.663 2 0.3197638201156918 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 134816 18890 WYQTKFETL True PC9_epitope_Rep5 1214.5971746002997 1214.5960699358602 77.68 2 0.3197385607269764 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 2343 5561 AEQEEEVQRAV True H1975_Epitope_Rep2 1286.61025846514 1286.60916993586 26.398 2 0.3195430176951166 0.00036105427849320016 0.9438714419765777 ['ENST00000531121.5_1_11:65686926-65687405:+|nuORF'] 53593 6437 KVVEGSFVYK True NCI_RA007_Epitope_Rep4 1154.6335601090198 1154.6324699358602 31.36 2 0.319540547427471 0.00036105427849320016 0.9438714419765777 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 83491 19390 QDGQFSVLFTK True PC9_epitope_Rep5 1268.6401020414398 1268.63900993586 79.629 2 0.3194596637249778 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 89696 3604 REYDGNIRQA True NCI_RA007_Epitope_Rep4 1220.5897978040798 1220.5881449037902 19.919 3 0.319290878677473 0.00036105427849320016 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'LTBP1-BIRC6|4|fusion', 'LTBP1-BIRC6|5|fusion', 'BIRC6|p.S4724F|2|0.13|ENSG00000115760|chr2:32607555-32607555|C/T|missense_variant', 'LTBP1-BIRC6|2|fusion', 'LTBP1-BIRC6|3|fusion'] 101574 10156 SPDQLADLYK True H1975_Epitope_Rep1 1148.5713537752797 1148.5702499358601 44.004 2 0.3191226150675799 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 140695 8092 YYQDTPKQI True PC9_epitope_Rep4 1154.5607890915799 1154.5596899358602 38.576 2 0.31894405643899526 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 138894 8962 YSDVGRYIDHY True H1975_Epitope_Rep3 1386.62042922602 1386.6193299358602 39.467 2 0.3188286070767581 0.00036105427849320016 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 112363 12442 TNAENEFVTIK True PC9_epitope_Rep2 1264.6299312805597 1264.62882993586 53.164 2 0.31867548028419523 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 69625 12152 LVTYVPVTTFK True NCI_RA007_Epitope_Rep5 1266.72237511342 1266.7212699358602 53.397 2 0.3184698853641466 0.00036105427849320016 0.9438714419765777 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 74846 15818 NLQEAEEWYK True PC9_epitope_Rep5 1308.59863115228 1308.5975299358602 65.834 2 0.318338977928843 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 26308 11955 FIDVDDERWHY True H1975_Epitope_Rep2 1493.65754301073 1493.65644993586 51.064 2 0.31819514290588813 0.00036105427849320016 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 21854 9976 ESEDPNYYQY True H1975_Epitope_Rep2 1306.49897668066 1306.49786993586 43.361 2 0.3180730853315776 0.00036105427849320016 0.9438714419765777 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2'] 22367 6692 ETEREYFNRY True H1975_Epitope_Rep2 1405.6262428824498 1405.62460490379 30.65 3 0.31782943173648875 0.00036105427849320016 0.9438714419765777 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 112360 8793 TNAENEFVTIK True NCI_RA007_Epitope_Rep4 1264.6299312805597 1264.62882993586 40.633 2 0.3177502314508256 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 115827 14447 TVMELVKIIYK True NCI_RA007_Epitope_Rep4 1335.7835954709901 1335.7824899358602 62.922 2 0.31773081757707383 0.00036105427849320016 0.9438714419765777 ['ENST00000522558.1_1_8:71553109-71556351:-|nuORF', 'ENSG00000147592|ENST00000276590|LACTB2'] 18470 13682 EKLEATINELV True NCI_RA007_Epitope_Rep2 1257.68163250025 1257.68052993586 57.863 2 0.3175270194179271 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 42101 12825 IEELQLIVNDK True NCI_RA007_Epitope_Rep1 1312.7238316654 1312.7227299358601 53.875 2 0.3174574358199559 0.00036105427849320016 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5'] 56133 10911 LDM[Oxidation]DSIIAEVK True H1975_Epitope_Rep1 1248.6271547796798 1248.62604993586 46.931 2 0.317382837833678 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 53583 4860 KVVDSLYNK True NCI_RA007_Epitope_Rep4 1064.5866099165999 1064.58550993586 25.141 2 0.3173274876785387 0.00036105427849320016 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 38434 6619 HGTFEYEYSQR True NCI_RA007_Epitope_Rep2 1415.61059281831 1415.6089349037902 30.356 3 0.31731601139020305 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 39904 20118 HQLENLSNFI True PC9_epitope_Rep5 1213.6091362663299 1213.60802993586 82.431 2 0.3172308059132063 0.00036105427849320016 0.9438714419765777 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2', 'ENST00000443067.1_1_1:166765603-166766044:+|nuORF'] 107166 16394 SYNNFFRMF True NCI_RA007_Epitope_Rep4 1224.53861417836 1224.53750993586 71.062 2 0.31680558085903915 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 55970 10400 LDIDSPPITAR True NCI_RA007_Epitope_Rep2 1196.6401020414398 1196.63900993586 45.046 2 0.3167654645006465 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 96750 9376 SEQLDLPVRQA True H1975_Epitope_Rep2 1254.65681473474 1254.6557099358602 41.027 2 0.3166636194668811 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF'] 27613 14543 FPTQALNFAFK True H1975_Epitope_Rep1 1282.6710082468996 1282.66990993586 61.144 2 0.3166413585303044 0.00036105427849320016 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant', 'ENSG00000151475|ENST00000281154|SLC25A31', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 136006 15368 YFINRSWEW True NCI_RA007_Epitope_Rep5 1299.6036569630699 1299.60254993586 65.819 2 0.3165095882044254 0.00036105427849320016 0.9438714419765777 ['ENSG00000064763|ENST00000536681|FAR2', 'nc|ENSG00000064763|Q96K12-2|FAR2'] 7715 6376 ASREEILAQAK True PC9_epitope_Rep1 1214.66190011518 1214.66026490379 29.334 3 0.3163752364850577 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 38733 5628 HHTFYNELR True NCI_RA007_Epitope_Rep4 1215.57850484439 1215.57685490379 28.25 3 0.31626461783524606 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 40648 5357 HTIDWVREK True NCI_RA007_Epitope_Rep4 1182.6145559999397 1182.6129149037902 27.173 3 0.31624387217756594 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000109572|P51790-2|CLCN3', 'nc|ENSG00000109572|P51790-4|CLCN3', 'nc|ENSG00000109572|P51790-5|CLCN3', 'ENSG00000109572|ENST00000513761|CLCN3', 'ENST00000502998.1_1_4:170601253-170601544:+|nuORF'] 129383 9988 VTEFEDIKSGY True H1975_Epitope_Rep2 1286.6030478263797 1286.6019499358601 43.409 2 0.31612058570073925 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 114442 5068 TSEDISQTSKY True H1975_Epitope_Rep3 1257.5724759740901 1257.57136993586 24.612 2 0.3160919316395673 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 53087 4193 KSDSGKPYYY True H1975_Epitope_Rep3 1206.55570371114 1206.55460993586 21.246 2 0.31609051407869226 0.00036105427849320016 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000467114.2_1_2:153535806-153549567:-|nuORF'] 48879 6685 KESYSVYVYK True NCI_RA007_Epitope_Rep5 1264.6339540318397 1264.63231490379 32.383 3 0.3160561222167401 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 48489 4555 KEFEKEISA True H1975_Epitope_Rep2 1079.54989005471 1079.5487899358602 22.628 2 0.3160461485750692 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 114801 15521 TTDDWKDFLY True H1975_Epitope_Rep1 1302.57683307854 1302.5757299358602 64.977 2 0.3160354803295138 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 61209 12247 LLDPKYGMFRY True H1975_Epitope_Rep2 1401.7114931598899 1401.70984490379 52.19 3 0.31598089954059405 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000480158.1_1_10:69714333-69714887:-|nuORF'] 29115 7548 FTSDLQDKNEY True H1975_Epitope_Rep2 1358.5990250751001 1358.59792993586 33.984 2 0.3158518680934439 0.00036105427849320016 0.9438714419765777 ['ENST00000551200.5_1_12:102471044-102512308:-|nuORF', 'ENSG00000075188|ENST00000552283|NUP37'] 46221 9426 ITDPDPDIRY True H1975_Epitope_Rep2 1203.57716743171 1203.57606993586 41.224 2 0.3158317790465094 0.00036105427849320016 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 98043 15088 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep5 1277.7343370957499 1277.7332299358602 63.043 2 0.3155974598880834 0.00036105427849320016 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 135776 6371 YENEVALRQ True NCI_RA007_Epitope_Rep2 1120.5512870370399 1120.55018993586 29.389 2 0.3154354718856878 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 26309 11805 FIDVDDERWHY True H1975_Epitope_Rep3 1493.65754301073 1493.6558849037901 50.555 3 0.3154173613236729 0.00036105427849320016 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 139267 9623 YTDFDGTRVY True H1975_Epitope_Rep3 1235.54586730343 1235.5447699358601 42.03 2 0.3154058549220808 0.00036105427849320016 0.9438714419765777 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 116995 20859 TYQDIFRDF True PC9_epitope_Rep2 1203.5560380643099 1203.5549499358601 85.679 2 0.3151948636694762 0.00036105427849320016 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 38071 4279 HEMQIQHPTA True H1975_Epitope_Rep2 1190.55024149122 1190.5491499358602 21.573 2 0.3151478862163796 0.00036105427849320016 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 92235 6883 RQIPYTMMK True NCI_RA007_Epitope_Rep4 1166.5940208795 1166.5929299358602 33.092 2 0.31513044598747403 0.00036105427849320016 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3'] 109667 4904 THEAQIQEMR True PC9_epitope_Rep5 1241.58226989549 1241.5806149037899 23.903 3 0.3151089845532625 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 16004 9064 EEAENTLQSFR True NCI_RA007_Epitope_Rep1 1322.61025846514 1322.60916993586 39.261 2 0.31495789381355965 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 25817 6478 FGDPVVQSDM[Oxidation]K True H1975_Epitope_Rep3 1237.56488887629 1237.56378993586 29.886 2 0.31494932878640486 0.00036105427849320016 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 76315 5391 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 25.774 2 0.31493966691426617 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 135245 12802 YAYDGKDYLAL True NCI_RA007_Epitope_Rep2 1290.6132185872598 1290.6121299358601 54.414 2 0.3148901239317908 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 72339 12016 MTDKFAQFDEY True H1975_Epitope_Rep2 1393.5860178632497 1393.5849299358601 51.299 2 0.31488093017393276 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 52726 13145 KQLDDLKVEL True PC9_epitope_Rep6 1199.6761531969898 1199.6745149037902 62.204 3 0.3148489591832685 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 116551 11806 TYFEKNFNL True NCI_RA007_Epitope_Rep3 1174.56587447202 1174.56476993586 53.556 2 0.314774698100214 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 134819 16407 WYQTKFETL True PC9_epitope_Rep6 1214.5971746002997 1214.5960699358602 75.502 2 0.31455988873270263 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 83479 12452 QDGQFSVLFTK True H1975_Epitope_Rep1 1268.6401020414398 1268.63900993586 52.933 2 0.3143926630175737 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 140624 18536 YYNPHLLLNTL True PC9_epitope_Rep6 1359.7186867153098 1359.7175899358601 83.942 2 0.31438359103713526 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 71800 13484 M[Oxidation]NSFVNDIFER True H1975_Epitope_Rep3 1386.62380073474 1386.62270993586 57.142 2 0.3142062953913537 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 116748 14425 TYLEKAIKI True PC9_epitope_Rep1 1077.6433965167298 1077.6422899358602 60.309 2 0.31417935799687174 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 49035 8942 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 44.378 2 0.31410448095022925 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 2253 7559 AENYDIPSADR True NCI_RA007_Epitope_Rep1 1249.55749461629 1249.5563899358601 33.395 2 0.31408294822077926 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 63012 9045 LNGTDPEDVIR True NCI_RA007_Epitope_Rep1 1227.60953018915 1227.6084299358602 39.186 2 0.31406980790158 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 45482 10145 ISEQFTAM[Oxidation]FR True H1975_Epitope_Rep1 1244.58595867404 1244.58486993586 43.961 2 0.3140611167778019 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 47972 4921 KAFNQGKIFK True NCI_RA007_Epitope_Rep4 1179.67642798051 1179.67477490379 25.389 3 0.3139483178704324 0.00036105427849320016 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 61530 11442 LLGELLQDNAK True H1975_Epitope_Rep1 1212.67140216972 1212.6703099358601 48.991 2 0.31390511161701645 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 28375 5620 FSDNQLQEGK True NCI_RA007_Epitope_Rep2 1164.54111627616 1164.54000993586 26.475 2 0.3138304325709149 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 45560 9905 ISGLIYEETR True NCI_RA007_Epitope_Rep1 1179.6135529404298 1179.61244993586 42.532 2 0.31372692312666317 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 48874 7175 KESYSVYVYK True NCI_RA007_Epitope_Rep2 1264.6339540318397 1264.63231490379 32.53 3 0.31371390745345024 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 54442 16419 KYTKIFNDF True PC9_epitope_Rep3 1174.60225998074 1174.60116993586 68.292 2 0.31361808210533665 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 28776 11490 FTDEEGYGRYL True H1975_Epitope_Rep2 1348.59354577184 1348.59244993586 49.252 2 0.3135778511916596 0.00036105427849320016 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 53109 5185 KSFDTSLIRK True NCI_RA007_Epitope_Rep5 1193.67682190333 1193.6751749037899 26.638 3 0.3133564657213638 0.00036105427849320016 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 124273 7492 VLDEADEM[Oxidation]LSR True NCI_RA007_Epitope_Rep2 1292.59183190012 1292.59072993586 33.768 2 0.31331667134280616 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 4811 4759 ALEQQVEEM[Oxidation]K True H1975_Epitope_Rep3 1219.5754535599897 1219.57434993586 23.433 2 0.31331628560490105 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 74570 10687 NLDEEKQLLY True H1975_Epitope_Rep3 1263.63468230783 1263.63358993586 46.183 2 0.313272874298986 0.00036105427849320016 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 80911 9864 PM[Oxidation]FIVNTNVPR True H1975_Epitope_Rep1 1302.6754423847801 1302.6743499358602 42.876 2 0.31320310201328017 0.00036105427849320016 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 44403 8941 INEVENQILTR True H1975_Epitope_Rep1 1327.7095785835897 1327.7084899358601 39.295 2 0.31308426896005764 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 18572 6161 EKYIDQEELNK True NCI_RA007_Epitope_Rep1 1407.6881744326695 1407.68653490379 28.002 3 0.31303136646245033 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 53381 10133 KVADGFKVV True PC9_epitope_Rep1 961.5596668927699 961.55856993586 43.85 2 0.31297871166526414 0.00036105427849320016 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 2315 5739 AEQAERYDDMA True H1975_Epitope_Rep2 1297.52448023585 1297.5233899358602 27.073 2 0.31292561140362735 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 7449 6975 ASDKETYELRY True H1975_Epitope_Rep3 1373.64630962069 1373.64466490379 31.791 3 0.31286073142703485 0.00036105427849320016 0.9438714419765777 ['ENSG00000163584|ENST00000295830|RPL22L1'] 137199 8459 YLDYHMEKY True H1975_Epitope_Rep2 1260.5485101557201 1260.54740993586 37.49 2 0.3128603500111352 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 42231 3130 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 16.575 2 0.3128394930367651 0.00036105427849320016 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 73934 14204 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69646993586 66.522 2 0.31260728251449355 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 137153 9576 YLDPNQRDLY True H1975_Epitope_Rep2 1295.61461556959 1295.61350993586 41.808 2 0.31259176378191894 0.00036105427849320016 0.9438714419765777 ['ENSG00000189144|ENST00000536220|ZNF573'] 119003 5212 VEFM[Oxidation]DDTSR True NCI_RA007_Epitope_Rep5 1114.46008945458 1114.45898993586 26.744 2 0.3125858830144428 0.00036105427849320016 0.9438714419765777 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 132653 21279 VYQLRFQFL True PC9_epitope_Rep2 1212.6655289436396 1212.6644299358602 87.312 2 0.31249683630409086 0.00036105427849320016 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 34281 11425 GPLQSVQVFGR True NCI_RA007_Epitope_Rep5 1186.6458561282197 1186.64474993586 50.596 2 0.31237033577169804 0.00036105427849320016 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 14576 5827 DVFRDPALKR True NCI_RA007_Epitope_Rep5 1215.6724052292298 1215.67075490379 29.099 3 0.3123330776709365 0.00036105427849320016 0.9438714419765777 ['ENSG00000131469|ENST00000253788|RPL27'] 139385 14028 YTEAEEFFVKY True H1975_Epitope_Rep2 1424.6499980188 1424.64890993586 59.108 2 0.3123213021908106 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'CHD8|p.Y756Pfs*9|1|0.24|ENSG00000100888|chr14:21409949-21409950|-/GG|frameshift_variant'] 47812 10747 IYSEEIVEM[Oxidation]YK True NCI_RA007_Epitope_Rep2 1418.66393421122 1418.6628299358601 46.403 2 0.3122888327683697 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 24075 20867 EYQKVWNLF True PC9_epitope_Rep2 1225.6131590176099 1225.61206993586 85.71 2 0.31228601239594567 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 52833 20111 KQVEEIFNLKF True PC9_epitope_Rep5 1393.7605515272896 1393.7594499358602 82.404 2 0.31228252255908884 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 114857 13227 TTDLFGRDLSY True H1975_Epitope_Rep1 1286.6142812164198 1286.6131899358602 55.975 2 0.31226751871766484 0.00036105427849320016 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 27529 9844 FPGQLNADLR True H1975_Epitope_Rep3 1129.5880068989297 1129.5869099358601 42.894 2 0.31222597986865164 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'TUBB6|p.R241C|1|0.58|ENSG00000176014|chr18:12325510-12325510|C/T|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 93752 3299 RTSEIYVHR True NCI_RA007_Epitope_Rep4 1159.6098049726697 1159.60816490379 18.406 3 0.3121175915583024 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 48595 5875 KEIEEYIHKP True H1975_Epitope_Rep2 1284.6714021697198 1284.66976490379 27.584 3 0.3120694191622083 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 107175 18162 SYNNFFRM[Oxidation]F True PC9_epitope_Rep6 1240.5335291783597 1240.5324299358601 82.502 2 0.31198020917695796 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 69623 11714 LVTYVPVTTFK True NCI_RA007_Epitope_Rep3 1266.72237511342 1266.7212699358602 53.189 2 0.31171458571502336 0.00036105427849320016 0.9438714419765777 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 45449 5648 ISEEDELDTK True H1975_Epitope_Rep3 1177.53502783621 1177.5339299358602 26.755 2 0.31170868471917196 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 42671 10562 IEVIEIM[Oxidation]TDR True NCI_RA007_Epitope_Rep2 1233.62748913285 1233.62638993586 45.681 2 0.3115782807214937 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 63010 8380 LNGTDPEDVIR True H1975_Epitope_Rep1 1227.60953018915 1227.6084299358602 37.162 2 0.311509434134712 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 53373 6330 KTYGEIFEK True NCI_RA007_Epitope_Rep5 1113.57062549929 1113.5695299358601 31.025 2 0.311426723888821 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 61128 13554 LLDEAQRLLY True H1975_Epitope_Rep3 1232.67648755016 1232.67538993586 57.417 2 0.31138981255199855 0.00036105427849320016 0.9438714419765777 ['ENSG00000083817|ENST00000196489|ZNF416', 'ENSG00000197128|ENST00000356584|ZNF772', 'ENSG00000171649|ENST00000597850|ZIK1', 'nc|ENSG00000197128|Q68DY9|ZNF772', 'ENSG00000180884|ENST00000404801|ZNF792'] 54040 12487 KYLSVQGQLF True NCI_RA007_Epitope_Rep4 1181.64445914589 1181.6433699358602 55.044 2 0.3108708815414393 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 23852 11533 EYLTKVDKL True PC9_epitope_Rep5 1107.6175756917098 1107.61646993586 49.358 2 0.3108624564631093 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 39903 20193 HQLENLSNFI True PC9_epitope_Rep1 1213.6091362663299 1213.60802993586 82.501 2 0.3108152285845151 0.00036105427849320016 0.9438714419765777 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2', 'ENST00000443067.1_1_1:166765603-166766044:+|nuORF'] 99520 9624 SLESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep2 1204.5434251557197 1204.5423299358602 42.05 2 0.31080759533674945 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 55969 10498 LDIDSPPITAR True NCI_RA007_Epitope_Rep1 1196.6401020414398 1196.63900993586 44.818 2 0.3107735749445812 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 52834 17940 KQVEEIFNLKF True PC9_epitope_Rep6 1393.7605515272896 1393.7589149037901 81.633 3 0.31069976794024234 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 139666 11553 YTSYPMHDFY True H1975_Epitope_Rep3 1322.52777471114 1322.5266699358601 49.566 2 0.3106931913265655 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 52629 6885 KQEELEAALQR True NCI_RA007_Epitope_Rep1 1313.6939285194496 1313.6922749037901 30.785 3 0.31065632261060006 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 32216 15109 GFGFVTFDDHD True NCI_RA007_Epitope_Rep2 1255.51456717515 1255.51346993586 63.46 2 0.31064350311712824 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 53427 13214 KVIDDTNITRL True PC9_epitope_Rep1 1286.7194149913 1286.71777490379 55.691 3 0.31062040226223264 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 52728 13229 KQLDDLKVEL True PC9_epitope_Rep6 1199.6761531969898 1199.6750499358602 62.539 2 0.3105536327438025 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 5791 13056 APFDLFENK True H1975_Epitope_Rep1 1079.52876068731 1079.52766993586 55.306 2 0.3104016601109557 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 45495 9244 ISEQTGKELLY True H1975_Epitope_Rep3 1279.66598243611 1279.6648899358602 40.548 2 0.3103971171078093 0.00036105427849320016 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 40876 6846 HVLVTLGEK True PC9_epitope_Rep4 994.58113061334 994.58002993586 33.553 2 0.31030918241004835 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 40688 6323 HTLNQIDSVK True PC9_epitope_Rep5 1153.6091362663299 1153.60802993586 29.297 2 0.31029097764051844 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 112361 8862 TNAENEFVTIK True NCI_RA007_Epitope_Rep5 1264.6299312805597 1264.62882993586 40.753 2 0.3102871702443321 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 65155 5646 LSDSGVTQRY True H1975_Epitope_Rep3 1124.5462016566 1124.5451099358602 26.748 2 0.31019819990103503 0.00036105427849320016 0.9438714419765777 ['ENSG00000092094|ENST00000206542|OSGEP', 'ENST00000555656.5_1_14:20915401-20917107:-|nuORF'] 10865 11429 DALNIETAIK True NCI_RA007_Epitope_Rep2 1086.5920892198599 1086.59098993586 49.048 2 0.3101436753149008 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 53595 5931 KVVEGSFVYK True NCI_RA007_Epitope_Rep5 1154.6335601090198 1154.63191490379 29.5 3 0.30999761680668836 0.00036105427849320016 0.9438714419765777 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 4813 4955 ALEQQVEEM[Oxidation]K True H1975_Epitope_Rep3 1219.5754535599897 1219.57434993586 24.187 2 0.30996341734263344 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 140427 19942 YYFEGIKQTF True PC9_epitope_Rep3 1294.6233893481397 1294.6222899358602 81.951 2 0.309815292140396 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 12996 13470 DLQFVEVTDVK True NCI_RA007_Epitope_Rep1 1291.6659824361102 1291.6648899358602 56.398 2 0.30979841222594007 0.00036105427849320016 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 76261 8812 NSDLSEKLEY True H1975_Epitope_Rep3 1196.55609763396 1196.5550099358602 38.902 2 0.3097928361690933 0.00036105427849320016 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 25653 7192 FEYIEENKYSR True H1975_Epitope_Rep1 1476.68850878584 1476.6868649037901 32.685 3 0.30969542092635255 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF', 'ENST00000366525.8_2_1:245025904-245026177:-|nuORF'] 85392 6289 QLEEAEEEAQR True PC9_epitope_Rep5 1330.60008770426 1330.5989899358601 29.167 2 0.30962582010302064 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 52631 6847 KQEELEAALQR True NCI_RA007_Epitope_Rep2 1313.6939285194496 1313.6922749037901 31.249 3 0.30953836854404776 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 46220 9373 ITDPDPDIRY True H1975_Epitope_Rep1 1203.57716743171 1203.57606993586 40.962 2 0.3094127039134486 0.00036105427849320016 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 42674 14279 IEVIEIM[Oxidation]TDR True PC9_epitope_Rep4 1233.62748913285 1233.62638993586 62.826 2 0.30937531063290113 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 77056 6392 NVYYNEATGGK True NCI_RA007_Epitope_Rep1 1214.5567663402996 1214.5556699358601 28.888 2 0.30921663408147954 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF'] 91314 2637 RM[Oxidation]GESDDSILR True NCI_RA007_Epitope_Rep5 1293.59831426289 1293.59665490379 14.83 3 0.30920840183804943 0.00036105427849320016 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 52628 6324 KQEELEAALQR True H1975_Epitope_Rep3 1313.6939285194496 1313.6922749037901 29.319 3 0.3092073917035062 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 38561 18743 HHFEWIQKL True PC9_epitope_Rep1 1236.64037682496 1236.63874490379 76.884 3 0.3091177303623474 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 57435 12401 LEINFNTLQTK True H1975_Epitope_Rep1 1319.7085159544301 1319.7074099358601 52.734 2 0.30910636092774396 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 16866 7323 EFTESQLQEGK True NCI_RA007_Epitope_Rep1 1294.6041104555395 1294.6030099358602 32.477 2 0.3090964004840513 0.00036105427849320016 0.9438714419765777 ['ENSG00000149591|ENST00000392951|TAGLN'] 25457 11262 FEM[Oxidation]SDFIVDTR True H1975_Epitope_Rep3 1374.6125673446998 1374.6114699358602 48.422 2 0.30897859767414065 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 126317 12188 VPIYEGYALPH True H1975_Epitope_Rep3 1257.63937376545 1257.63826993586 52.053 2 0.3089488871824562 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 93753 2638 RTSEIYVHR True NCI_RA007_Epitope_Rep4 1159.6098049726697 1159.60816490379 14.769 3 0.3088953912572244 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 73921 17210 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69646993586 71.354 2 0.3088550948447418 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 118134 5957 VAVEEVDEEGK True NCI_RA007_Epitope_Rep1 1202.5666623176596 1202.5655699358601 27.218 2 0.30885284731539825 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 138915 10063 YSEDLSDMHY True H1975_Epitope_Rep1 1258.48121844154 1258.48012993586 43.648 2 0.3086791241260279 0.00036105427849320016 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 5770 14205 APELLFFAK True NCI_RA007_Epitope_Rep3 1034.5800679841798 1034.5789699358602 63.18 2 0.3086667784960771 0.00036105427849320016 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 53873 18408 KYIDFDHVF True PC9_epitope_Rep4 1182.57095985246 1182.5698699358602 78.872 2 0.3085833464173231 0.00036105427849320016 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 28928 7344 FTENDKEYQEY True H1975_Epitope_Rep2 1464.6045043783597 1464.60340993586 33.189 2 0.3084755354723734 0.00036105427849320016 0.9438714419765777 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 56975 7176 LEEANTELEVK True H1975_Epitope_Rep1 1273.64016161109 1273.63906993586 32.625 2 0.30841080913309826 0.00036105427849320016 0.9438714419765777 ['ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF'] 76363 13470 NSFVNDIFER True H1975_Epitope_Rep1 1239.5884008217497 1239.58730993586 56.929 2 0.3080403707205924 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 112461 6291 TNQELQEINR True NCI_RA007_Epitope_Rep1 1243.61567819875 1243.61458993586 28.499 2 0.3079282925758025 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 139785 12447 YVDDASWMRY True H1975_Epitope_Rep3 1304.54957278488 1304.54846993586 53.07 2 0.30787284712128743 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 42808 19450 IFIQNSKLYF True PC9_epitope_Rep4 1271.69140933831 1271.6903099358601 82.93 2 0.3077990814766377 0.00036105427849320016 0.9438714419765777 ['ENSG00000138459|ENST00000492406|SLC35A5'] 4698 12511 ALDLEIATYR True NCI_RA007_Epitope_Rep1 1163.6186383208699 1163.61754993586 52.644 2 0.3077501329769524 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 15042 7156 EAAENSLVAYK True H1975_Epitope_Rep3 1193.5928174958497 1193.59172993586 32.498 2 0.30772538208346084 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE'] 114864 13698 TTDLSFLDKY True H1975_Epitope_Rep3 1201.58666948625 1201.5855699358601 57.983 2 0.30770617629106534 0.00036105427849320016 0.9438714419765777 ['ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-4|UBA6', 'ENST00000429659.7_1_4:68529542-68566852:-|nuORF', 'nc|ENSG00000033178|A0AVT1-3|UBA6'] 57858 6878 LEQEIATYR True H1975_Epitope_Rep3 1121.57168812845 1121.5705899358602 31.415 2 0.30767824549391637 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16722254-16722455:-|nuORF', 'CON__P35900', 'KRT20|p.R372S|2|0.36|ENSG00000171431|chr17:40878170-40878170|G/T|missense_variant', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__Q61782', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312'] 53790 14635 KYFLKPEVL True PC9_epitope_Rep2 1135.6641319613097 1135.66302993586 61.562 2 0.3076664891545863 0.00036105427849320016 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 139784 12663 YVDDASWMRY True H1975_Epitope_Rep2 1304.54957278488 1304.54846993586 53.808 2 0.3076596796811499 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 114863 13823 TTDLSFLDKY True H1975_Epitope_Rep2 1201.58666948625 1201.5855699358601 58.318 2 0.30763526886406256 0.00036105427849320016 0.9438714419765777 ['ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-4|UBA6', 'ENST00000429659.7_1_4:68529542-68566852:-|nuORF', 'nc|ENSG00000033178|A0AVT1-3|UBA6'] 4451 5181 AIYKTPPGIQK True NCI_RA007_Epitope_Rep3 1214.7023083751799 1214.70067490379 27.371 3 0.3075732065248501 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'nc|ENSG00000183337|Q6W2J9-3|BCOR', 'ENST00000490976.5_1_X:39931586-39937182:-|nuORF'] 131255 10125 VVQDGITLITK True NCI_RA007_Epitope_Rep5 1185.69688864157 1185.6957899358601 45.58 2 0.30741842487952975 0.00036105427849320016 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 28773 7443 FTDEEGYGRY True H1975_Epitope_Rep2 1235.50948179471 1235.5083899358601 33.574 2 0.3074082077971035 0.00036105427849320016 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 29654 7179 FVM[Oxidation]EVEVDGQK True H1975_Epitope_Rep1 1295.60675368827 1295.6056499358601 32.635 2 0.3072371244032472 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 53983 18415 KYLDEDTIYHL True PC9_epitope_Rep3 1408.68744615668 1408.68580490379 76.04 3 0.3072366546478494 0.00036105427849320016 0.9438714419765777 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 117065 18127 TYQRWQFTL True PC9_epitope_Rep6 1241.61930702721 1241.61820993586 82.361 2 0.3072351347994323 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 3193 5972 AGELTEDEVER True NCI_RA007_Epitope_Rep5 1246.5677249468197 1246.5666299358602 29.655 2 0.30721290019479647 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 27614 14557 FPTQALNFAFK True H1975_Epitope_Rep3 1282.6710082468996 1282.66990993586 61.36 2 0.30717345992326656 0.00036105427849320016 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant', 'ENSG00000151475|ENST00000281154|SLC25A31', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 52749 18702 KQMEQISQFL True PC9_epitope_Rep2 1250.6329084860197 1250.63180993586 77.31 2 0.3071078826304173 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 2505 9989 AEQQALRLEV True H1975_Epitope_Rep2 1155.6247863304698 1155.62368993586 43.412 2 0.30704909966355104 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 10059 8779 AYVHMVTHF True NCI_RA007_Epitope_Rep5 1103.52223583823 1103.52112993586 40.436 2 0.307032841255991 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 65153 5554 LSDSGVTQRY True H1975_Epitope_Rep2 1124.5462016566 1124.5451099358602 26.371 2 0.30699196179612187 0.00036105427849320016 0.9438714419765777 ['ENSG00000092094|ENST00000206542|OSGEP', 'ENST00000555656.5_1_14:20915401-20917107:-|nuORF'] 47843 12671 IYSVFRNAASF True NCI_RA007_Epitope_Rep3 1273.6455217750497 1273.6444299358602 57.085 2 0.3069863191758441 0.00036105427849320016 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 61459 19813 LLFEGEKITI True PC9_epitope_Rep4 1161.6645258841297 1161.6634299358602 84.337 2 0.30695332722021523 0.00036105427849320016 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000168255|ENST00000513506|POLR2J3'] 23542 21115 EWSPYTKIFQF True PC9_epitope_Rep4 1444.7027022979998 1444.70160993586 89.381 2 0.3069504118246443 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 6777 12839 AQEYEALLNIK True NCI_RA007_Epitope_Rep2 1290.6819668534197 1290.68086993586 54.56 2 0.30693758462303555 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 9062 14516 AVIVLVENFYK True NCI_RA007_Epitope_Rep3 1293.7332741502898 1293.7321699358602 64.404 2 0.3069011596551216 0.00036105427849320016 0.9438714419765777 ['ENST00000474991.1_1_1:153580188-153585458:-|nuORF', 'ENSG00000188643|ENST00000368706|S100A16'] 23 16468 [Acetylation]-AAAAELSLLEK True H1975_Epitope_Rep3 1156.63395434814 1156.6328499358601 68.833 2 0.3068983078990559 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124802|O43324-2|EEF1E1', 'ENSG00000124802|ENST00000379715|EEF1E1'] 30142 20747 FYQRFPLSF True PC9_epitope_Rep2 1203.6076797143498 1203.60658993586 85.243 2 0.30686726556204813 0.00036105427849320016 0.9438714419765777 ['ENSG00000134109|ENST00000256497|EDEM1', 'ENST00000443790.1_1_3:5229490-5231099:+|nuORF'] 135581 6276 YEEIDNAPEER True NCI_RA007_Epitope_Rep2 1363.5891886673896 1363.5880899358601 29.018 2 0.30686237794013405 0.00036105427849320016 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 129430 14050 VTEITDDLHFY True H1975_Epitope_Rep3 1351.6295969273901 1351.6284899358602 59.366 2 0.30685141038847336 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 139782 12490 YVDDASWMRY True H1975_Epitope_Rep1 1304.54957278488 1304.54846993586 53.083 2 0.30684578437676024 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 17440 8086 EHFQDDVFNEK True NCI_RA007_Epitope_Rep2 1406.6102584651396 1406.6086049037901 36.085 3 0.30678276744403454 0.00036105427849320016 0.9438714419765777 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 54438 16171 KYTKIFNDF True PC9_epitope_Rep1 1174.60225998074 1174.60116993586 67.017 2 0.3066601575719877 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 9064 15078 AVIVLVENFYK True NCI_RA007_Epitope_Rep5 1293.7332741502898 1293.7321699358602 64.665 2 0.3065993809147635 0.00036105427849320016 0.9438714419765777 ['ENST00000474991.1_1_1:153580188-153585458:-|nuORF', 'ENSG00000188643|ENST00000368706|S100A16'] 101575 10124 SPDQLADLYK True H1975_Epitope_Rep3 1148.5713537752797 1148.5702499358601 43.985 2 0.3065780205107098 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 127125 20606 VQDELHSVLGL True PC9_epitope_Rep1 1208.64010204144 1208.63900993586 84.078 2 0.30657296536052714 0.00036105427849320016 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 116997 20146 TYQDIFRDF True PC9_epitope_Rep4 1203.5560380643099 1203.5549499358601 85.628 2 0.306547608490206 0.00036105427849320016 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 108391 16786 TEDYLSLILNR True H1975_Epitope_Rep1 1335.7034305739899 1335.70232993586 69.968 2 0.3065431217834986 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 136113 15147 YGEPSEVFINR True PC9_epitope_Rep5 1309.6302656337298 1309.62916993586 63.27 2 0.3065322579540994 0.00036105427849320016 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 136102 14582 YGEPGEVFINK True PC9_epitope_Rep3 1251.6135529404298 1251.61244993586 61.217 2 0.3064048207705077 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 29121 8534 FTSIGEDYDER True NCI_RA007_Epitope_Rep2 1330.5677249468197 1330.5666299358602 37.84 2 0.30638468865656254 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 69222 17643 LVNELTEFAK True PC9_epitope_Rep3 1162.6233893481399 1162.6222899358602 73.056 2 0.306350352812782 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 23957 19798 EYNSDLHQFF True PC9_epitope_Rep5 1298.5567663402996 1298.5556699358601 81.198 2 0.30634294744131146 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 52832 19075 KQVEEIFNLKF True PC9_epitope_Rep4 1393.7605515272896 1393.7589149037901 81.462 3 0.30632093167115443 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 75518 3952 NQKDPGVLDR True NCI_RA007_Epitope_Rep2 1140.58873517492 1140.5870849037901 20.01 3 0.30610742487855475 0.00036105427849320016 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 45558 9202 ISGLIYEETR True H1975_Epitope_Rep1 1179.6135529404298 1179.61244993586 40.302 2 0.3057571374330555 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 91287 20183 RLYDGLFKVI True PC9_epitope_Rep2 1222.70739375562 1222.70575490379 83.049 3 0.30569308935913286 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 76322 6620 NSEEMKEAYY True H1975_Epitope_Rep2 1262.5125185698198 1262.5114299358602 30.372 2 0.30562425458300274 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 73026 12030 NDEELNKLLGK True PC9_epitope_Rep6 1271.6721304457099 1271.6710299358601 57.568 2 0.30555507039968083 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 96751 9205 SEQLDLPVRQA True H1975_Epitope_Rep3 1254.65681473474 1254.6557099358602 40.4 2 0.30555444607777077 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF'] 56195 20829 LDPFLLFDEFK True H1975_Epitope_Rep1 1382.7122043525399 1382.7111099358601 86.559 2 0.3055392372708616 0.00036105427849320016 0.9438714419765777 ['ENSG00000087842|ENST00000380420|PIR', 'ENST00000471725.1_1_X:15496691-15511410:-|nuORF', 'ENST00000476381.5_1_X:15447791-15497935:-|nuORF'] 11419 11952 DFM[Oxidation]IQGGDFTR True NCI_RA007_Epitope_Rep1 1301.5710368858895 1301.56992993586 50.476 2 0.30552997399303233 0.00036105427849320016 0.9438714419765777 ['ENSG00000166794|ENST00000300026|PPIB', 'ENST00000561048.1_1_15:64452264-64455191:-|nuORF'] 138891 9068 YSDVGRYIDHY True H1975_Epitope_Rep2 1386.62042922602 1386.6193299358602 39.834 2 0.3054348920424254 0.00036105427849320016 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 55967 10121 LDIDSPPITAR True H1975_Epitope_Rep3 1196.6401020414398 1196.63900993586 43.974 2 0.30542470038127134 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 52719 13928 KQLDDLKVEL True PC9_epitope_Rep4 1199.6761531969898 1199.6745149037902 61.478 3 0.30537501602740513 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 43641 19827 IILEEGKEILV True PC9_epitope_Rep5 1254.7435044808199 1254.74240993586 81.31 2 0.3052627515457104 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 24839 6241 FDDAVVQSDM[Oxidation]K True H1975_Epitope_Rep3 1269.55471811541 1269.55362993586 29.018 2 0.30524461639795003 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000533238.5_1_11:122929516-122932032:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 57859 7490 LEQEIATYR True NCI_RA007_Epitope_Rep1 1121.57168812845 1121.5705899358602 33.126 2 0.30524289549516925 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16722254-16722455:-|nuORF', 'CON__P35900', 'KRT20|p.R372S|2|0.36|ENSG00000171431|chr17:40878170-40878170|G/T|missense_variant', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__Q61782', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312'] 132403 14012 VYNENLVHM[Oxidation]I True PC9_epitope_Rep2 1246.60160873818 1246.6005099358601 59.173 2 0.30522548021391044 0.00036105427849320016 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 90855 7722 RKWDTEIRL True NCI_RA007_Epitope_Rep3 1215.67240522923 1215.67075490379 37.497 3 0.3051935236802215 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 93833 5386 RVEIM[Oxidation]EEESEQ True NCI_RA007_Epitope_Rep2 1393.60312485981 1393.6020299358602 25.569 2 0.3051833287366208 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101557|P54578-2|USP14', 'nc|ENSG00000101557|P54578-3|USP14', 'ENSG00000101557|ENST00000261601|USP14', 'ENST00000578942.5_1_18:210315-211281:+|nuORF'] 19031 12939 ELGLPEELVSR True H1975_Epitope_Rep1 1240.66631678928 1240.66520993586 54.846 2 0.305136729918973 0.00036105427849320016 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 11308 7198 DETNYGIPQR True H1975_Epitope_Rep1 1191.5520153130299 1191.55090993586 32.701 2 0.3050920253373368 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 107173 19995 SYNNFFRM[Oxidation]F True PC9_epitope_Rep2 1240.5335291783597 1240.5324299358601 82.313 2 0.30508776551956324 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 67605 11653 LTEVDNYHFY True H1975_Epitope_Rep3 1299.5771674317102 1299.57606993586 49.959 2 0.3050779900137656 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 126316 12266 VPIYEGYALPH True H1975_Epitope_Rep1 1257.63937376545 1257.63826993586 52.205 2 0.3049612436622841 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 5795 13404 APFDLFENR True H1975_Epitope_Rep1 1107.53490869691 1107.53380993586 56.671 2 0.3049201519260683 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'HSP90AA1|p.R346H|1|0.5|ENSG00000080824|chr14:102084509-102084509|C/T|missense_variant'] 135578 5741 YEEIDNAPEER True H1975_Epitope_Rep1 1363.5891886673896 1363.5880899358601 27.151 2 0.30488911169977273 0.00036105427849320016 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 53578 5518 KVTEGSFVYK True NCI_RA007_Epitope_Rep5 1156.61282466444 1156.61172993586 27.912 2 0.30482535308647746 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 129076 6879 VTAQVVGTERY True H1975_Epitope_Rep3 1221.6353510141698 1221.63424993586 31.419 2 0.3047593612203821 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000574268.1_1_17:4710512-4711565:+|nuORF', 'PLD2|p.T76Qfs*77|1|0.12|ENSG00000129219|chr17:4808096-4808097|AT/-|frameshift_variant'] 135729 5597 YEKEEDWRNAA True H1975_Epitope_Rep3 1409.62115750201 1409.61952490379 26.569 3 0.30473233764496926 0.00036105427849320016 0.9438714419765777 ['ENSG00000138663|ENST00000264389|COPS4', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENST00000506443.5_1_4:83956377-83978089:+|nuORF'] 56945 6844 LEDTLAETEAR True H1975_Epitope_Rep1 1246.60411045554 1246.6030099358602 31.369 2 0.3046743491956674 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 14923 11899 DYLEKYYKF True NCI_RA007_Epitope_Rep4 1267.6124903112698 1267.6113899358602 52.77 2 0.30462301788419316 0.00036105427849320016 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 42676 13978 IEVIEIMTDR True NCI_RA007_Epitope_Rep1 1217.63257413285 1217.6314699358602 58.397 2 0.3046138756874883 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 120022 4360 VFDPQNDKPSK True NCI_RA007_Epitope_Rep2 1273.63026563373 1273.62862490379 21.595 3 0.30453211260708907 0.00036105427849320016 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000467622.2_1_12:110872962-110874052:-|nuORF', 'ENST00000397300.2_1_11:93921617-93921950:-|nuORF'] 71804 9237 M[Oxidation]NTFSVVPSPK True NCI_RA007_Epitope_Rep2 1221.60635976545 1221.6052699358602 40.541 2 0.304468612017117 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 139410 6841 YTEFTPTEKDE True H1975_Epitope_Rep2 1358.5877916850598 1358.58668993586 31.23 2 0.30446026106146656 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 87839 10685 QVISQAAVVHA True PC9_epitope_Rep5 1121.61930702721 1121.61820993586 46.091 2 0.30445028324969164 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 110156 9192 TIDDLEDKLK True NCI_RA007_Epitope_Rep1 1188.62378327096 1188.6221249037899 39.756 3 0.3044165428344039 0.00036105427849320016 0.9438714419765777 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF'] 135728 5529 YEKEEDWRNAA True H1975_Epitope_Rep2 1409.62115750201 1409.62006993586 26.275 2 0.3043229543892633 0.00036105427849320016 0.9438714419765777 ['ENSG00000138663|ENST00000264389|COPS4', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENST00000506443.5_1_4:83956377-83978089:+|nuORF'] 11418 11346 DFM[Oxidation]IQGGDFTR True H1975_Epitope_Rep3 1301.5710368858895 1301.56992993586 48.753 2 0.3042599674606236 0.00036105427849320016 0.9438714419765777 ['ENSG00000166794|ENST00000300026|PPIB', 'ENST00000561048.1_1_15:64452264-64455191:-|nuORF'] 16563 9352 EEQLQQIRAE True PC9_epitope_Rep3 1242.6204292260197 1242.6193299358602 40.91 2 0.30424968468368774 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 2488 6863 AEQPTRYETL True H1975_Epitope_Rep2 1206.5880664685799 1206.58696993586 31.318 2 0.3042395367637357 0.00036105427849320016 0.9438714419765777 ['ENSG00000085491|ENST00000565488|SLC25A24'] 76389 10178 NSLESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep1 1318.5863525968596 1318.58524993586 43.601 2 0.30420147012908166 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 105312 4610 STTTGHLIYK True NCI_RA007_Epitope_Rep4 1119.5924235730301 1119.5913299358601 24.144 2 0.3040894643379675 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2'] 108393 17396 TEDYLSLILNR True NCI_RA007_Epitope_Rep1 1335.7034305739899 1335.70232993586 71.8 2 0.3040664024352248 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 8137 9038 ATEVDSRWQEY True H1975_Epitope_Rep3 1382.6102584651399 1382.60916993586 39.752 2 0.30401385526894653 0.00036105427849320016 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000485063.1_1_1:39748843-39749872:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 89182 2755 REIEDPEDRKP True H1975_Epitope_Rep2 1382.6790067312995 1382.67736490379 14.625 3 0.3039642264476116 0.00036105427849320016 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'nc|ENSG00000127022|P27824-3|CANX'] 27336 8210 FMEKETPLRY True H1975_Epitope_Rep2 1312.6485585501598 1312.64692490379 36.533 3 0.3039181022988334 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1'] 53924 7883 KYINTDAKF True PC9_epitope_Rep2 1098.5709598524597 1098.5698699358602 35.688 2 0.30389776045438743 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 14237 7239 DSYSSSRSDLY True H1975_Epitope_Rep2 1278.5364248185401 1278.53532993586 32.779 2 0.30386537698066907 0.00036105427849320016 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 138944 6124 YSEGYPGQRY True H1975_Epitope_Rep2 1218.53055159246 1218.5294499358602 28.536 2 0.3038604996127007 0.00036105427849320016 0.9438714419765777 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 64078 9097 LQEAEEWYK True NCI_RA007_Epitope_Rep2 1194.55570371114 1194.55460993586 39.989 2 0.30379663084678876 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 53605 6675 KVVNPLFEK True NCI_RA007_Epitope_Rep5 1072.6280808057597 1072.6269899358601 32.344 2 0.3037828639920629 0.00036105427849320016 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 134413 9743 WTDILSHGRY True H1975_Epitope_Rep2 1246.6094706195 1246.60836993586 42.464 2 0.30377788474510287 0.00036105427849320016 0.9438714419765777 ['ENSG00000171316|ENST00000423902|CHD7'] 15598 7780 EATTEFSVDAR True NCI_RA007_Epitope_Rep2 1224.56224564356 1224.5611499358602 34.891 2 0.3036227386336391 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 93958 14812 RVLQALEGLK True PC9_epitope_Rep5 1125.6869926642098 1125.6853349037901 61.974 3 0.303612009418508 0.00036105427849320016 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 26003 19590 FHDDWISSI True PC9_epitope_Rep4 1118.5032742154601 1118.5021699358601 83.476 2 0.30361123195848355 0.00036105427849320016 0.9438714419765777 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 94402 13881 RYFDPANGKF True PC9_epitope_Rep3 1213.5880068989297 1213.58635490379 58.474 3 0.3033987854747393 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 105896 18775 SVLDDNKLLTL True PC9_epitope_Rep6 1229.68671788069 1229.68562993586 84.858 2 0.30338154250465876 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 72802 18955 NAIDRLVNI True PC9_epitope_Rep2 1026.5821932425 1026.58108993586 78.275 2 0.3033572522669199 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 39358 8401 HLVDEPQNLIK True H1975_Epitope_Rep3 1304.7088503076 1304.7072149037901 37.298 3 0.3032620032997034 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 139409 6776 YTEFTPTEKDE True H1975_Epitope_Rep1 1358.5877916850598 1358.58668993586 31.106 2 0.3032471262481805 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 80913 10032 PM[Oxidation]FIVNTNVPR True H1975_Epitope_Rep3 1302.6754423847801 1302.6743499358602 43.623 2 0.30324134995943075 0.00036105427849320016 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 70708 16622 [Acetylation]-M[Oxidation]DPNTIIEALR True H1975_Epitope_Rep1 1329.65985220659 1329.6587499358602 69.313 2 0.30313265828554586 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000527431.1_1_11:9406310-9430044:+|nuORF', 'IPO7-WEE1|1|fusion'] 40693 8623 HTMEFALVK True NCI_RA007_Epitope_Rep4 1074.55320161334 1074.55210993586 39.951 2 0.3030802991242588 0.00036105427849320016 0.9438714419765777 ['ENSG00000182636|ENST00000649030|NDN'] 137207 8503 YLEEIATQM[Oxidation]R True NCI_RA007_Epitope_Rep1 1268.60708804144 1268.6059899358602 37.074 2 0.303052004169286 0.00036105427849320016 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 101979 15065 SPNELVDDLFK True H1975_Epitope_Rep1 1275.63468230783 1275.63358993586 63.199 2 0.30297780416556386 0.00036105427849320016 0.9438714419765777 ['ENSG00000088833|ENST00000216879|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-5|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-4|NSFL1C'] 64043 9265 LQDGEFSM[Oxidation]DLR True NCI_RA007_Epitope_Rep2 1325.59216625329 1325.59106993586 40.649 2 0.3029716763225189 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 55964 9978 LDIDSPPITAR True H1975_Epitope_Rep1 1196.6401020414398 1196.63900993586 43.317 2 0.3029511786770399 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 24764 20502 FAYDGKDYLTL True PC9_epitope_Rep3 1304.6288686513997 1304.6277699358602 84.121 2 0.3029505605997773 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 33979 17815 GNFNYIEFTR True PC9_epitope_Rep4 1259.5934862021898 1259.5923899358602 76.559 2 0.30288484504858254 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 54793 10099 LAEYDLDKY True H1975_Epitope_Rep2 1128.5339056373998 1128.53280993586 43.84 2 0.30283093402450645 0.00036105427849320016 0.9438714419765777 ['ENSG00000136045|ENST00000412830|PWP1', 'nc|ENSG00000136045|Q13610-2|PWP1'] 63011 8542 LNGTDPEDVIR True H1975_Epitope_Rep3 1227.60953018915 1227.6084299358602 37.845 2 0.3028281856271945 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 56981 10662 LEEDEEELFK True NCI_RA007_Epitope_Rep2 1279.58197802863 1279.5808899358601 46.072 2 0.30275546232421385 0.00036105427849320016 0.9438714419765777 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF', 'ENST00000435265.5_1_22:20106640-20110140:+|nuORF'] 84267 12491 QEYEALLNIK True NCI_RA007_Epitope_Rep1 1219.6448530687096 1219.6437499358601 52.565 2 0.3027382189248994 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 69486 11238 LVSESSDVLPK True PC9_epitope_Rep1 1172.6288686514001 1172.6277699358602 48.106 2 0.3026603994837327 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 81769 4507 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 22.456 3 0.3026594945664753 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 3549 9012 AGNEDIITLR True H1975_Epitope_Rep1 1100.5825871653199 1100.5814899358602 39.569 2 0.3026326343162222 0.00036105427849320016 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA'] 137206 7854 YLEEIATQM[Oxidation]R True H1975_Epitope_Rep1 1268.60708804144 1268.6059899358602 35.162 2 0.3026172459185184 0.00036105427849320016 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 53549 5251 KVQEMNYIQK True NCI_RA007_Epitope_Rep4 1279.6594575870297 1279.65781490379 26.74 3 0.3025662832235753 0.00036105427849320016 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 14839 11000 DYETATLSDIK True NCI_RA007_Epitope_Rep1 1254.5979624459399 1254.59686993586 46.781 2 0.30254960015903043 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 139459 11032 YTFGTKEPLY True H1975_Epitope_Rep2 1217.5968402471299 1217.59574993586 47.464 2 0.3024173752095878 0.00036105427849320016 0.9438714419765777 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 42673 15461 IEVIEIM[Oxidation]TDR True PC9_epitope_Rep3 1233.62748913285 1233.62638993586 64.622 2 0.3023448417292395 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 940 5289 ADTQTYQPYNK True NCI_RA007_Epitope_Rep1 1327.6044448087098 1327.60334993586 24.655 2 0.30212237508744033 0.00036105427849320016 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'DCAF5-ERH|1|fusion'] 70083 19046 LYIGWDKHYGF True PC9_epitope_Rep4 1397.67682190333 1397.6751749037899 81.35 3 0.30206214008263405 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 94888 5287 RYPDNLKHL True NCI_RA007_Epitope_Rep4 1154.61964138038 1154.61799490379 26.887 3 0.30205577676930045 0.00036105427849320016 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 99372 6916 SLDVNQDSELK True H1975_Epitope_Rep3 1246.60411045554 1246.6030099358602 31.562 2 0.3020124498332668 0.00036105427849320016 0.9438714419765777 ['ENSG00000189171|ENST00000476133|S100A13'] 94650 18197 RYLDWIKKI True PC9_epitope_Rep2 1233.7233781729299 1233.7217249037901 75.301 3 0.3019015363720904 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 27526 9749 FPGQLNADLR True H1975_Epitope_Rep1 1129.5880068989297 1129.5869099358601 42.429 2 0.30182140676329894 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'TUBB6|p.R241C|1|0.58|ENSG00000176014|chr18:12325510-12325510|C/T|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 25064 12340 FDEESYSLLR True NCI_RA007_Epitope_Rep1 1257.5877321154098 1257.5866299358602 51.972 2 0.3017608315380242 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 73009 9356 NDEELNKLLGK True NCI_RA007_Epitope_Rep4 1271.6721304457099 1271.6710299358601 42.843 2 0.3016369181563986 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 119002 5117 VEFM[Oxidation]DDTSR True NCI_RA007_Epitope_Rep5 1114.46008945458 1114.45898993586 26.38 2 0.30162342551852533 0.00036105427849320016 0.9438714419765777 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 2173 5078 AEM[Oxidation]PQNYRP True H1975_Epitope_Rep2 1120.4971436696399 1120.4960499358601 24.614 2 0.3016094559932169 0.00036105427849320016 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 92234 6278 RQIPYTMMK True NCI_RA007_Epitope_Rep3 1166.5940208795 1166.5929299358602 31.697 2 0.30159968774398105 0.00036105427849320016 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3'] 47232 17641 IYDPNLAFLRF True NCI_RA007_Epitope_Rep5 1367.7237720957498 1367.72266993586 74.639 2 0.3015692461464399 0.00036105427849320016 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 125234 8493 VLQSFTVDSSK True NCI_RA007_Epitope_Rep2 1209.62411762413 1209.6230299358601 37.68 2 0.3015467113057927 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 63101 9649 LNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 1088.58998142532 1088.5888899358602 41.532 2 0.30153558534470826 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 47975 9751 KAFQQEISL True NCI_RA007_Epitope_Rep3 1062.57095985246 1062.5698699358602 45.423 2 0.3014264655047624 0.00036105427849320016 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF'] 7714 6277 ASREEILAQAK True PC9_epitope_Rep1 1214.66190011518 1214.66026490379 28.957 3 0.30139159518355174 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 72236 13246 MRYNEKELQAL True PC9_epitope_Rep5 1393.70238502817 1393.70074490379 55.961 3 0.301362199472106 0.00036105427849320016 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 88008 7636 QVSPEAGVQKV True PC9_epitope_Rep1 1140.6138872935999 1140.61278993586 34.195 2 0.301329195514351 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 93691 4888 RTLDLTYRK True NCI_RA007_Epitope_Rep4 1164.66150619236 1164.65986490379 25.252 3 0.3013207728770205 0.00036105427849320016 0.9438714419765777 ['ENST00000369183.8_1_10:120095785-120095896:-|nuORF'] 105892 20835 SVLDDNKLLTL True PC9_epitope_Rep3 1229.68671788069 1229.68562993586 85.413 2 0.30125885859414514 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 108298 12819 TEDDFQRELF True H1975_Epitope_Rep2 1298.5778957076998 1298.57678993586 54.417 2 0.30114000241295624 0.00036105427849320016 0.9438714419765777 ['ENSG00000125686|ENST00000300651|MED1'] 107133 17526 SYMLVNENRF True PC9_epitope_Rep5 1271.5968573304701 1271.59576993586 72.419 2 0.30103346690777844 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 110736 4741 TKFETEQALR True NCI_RA007_Epitope_Rep5 1221.6353510141698 1221.6337049037902 24.919 3 0.3010259246501304 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF'] 53492 11560 KVLEDQQNIRL True PC9_epitope_Rep5 1354.75686312918 1354.75522490379 49.461 3 0.3010110299808191 0.00036105427849320016 0.9438714419765777 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32'] 132654 20579 VYQLRFQFL True PC9_epitope_Rep4 1212.6655289436396 1212.6644299358602 87.31 2 0.300998382794757 0.00036105427849320016 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 9784 14773 AYLESFYKF True NCI_RA007_Epitope_Rep5 1166.5648118428599 1166.56370993586 63.496 2 0.3009933444200179 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 125626 12122 VM[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1313.6325745132897 1313.6314699358602 51.643 2 0.30084065985424235 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 65430 5244 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 25.237 2 0.3007753941982197 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 24077 20151 EYQKVWNLF True PC9_epitope_Rep4 1225.6131590176099 1225.61206993586 85.648 2 0.3007604149079002 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 53585 4339 KVVDSLYNK True NCI_RA007_Epitope_Rep5 1064.5866099165999 1064.58550993586 23.297 2 0.3007315778463659 0.00036105427849320016 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 53371 6611 KTYGEIFEK True NCI_RA007_Epitope_Rep4 1113.57062549929 1113.5695299358601 32.058 2 0.3006512918582362 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 22369 6766 ETEREYFNRY True H1975_Epitope_Rep3 1405.6262428824498 1405.62460490379 30.98 3 0.30063883557983423 0.00036105427849320016 0.9438714419765777 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 118373 9431 VDINAPDVDVR True H1975_Epitope_Rep3 1211.61461556959 1211.61350993586 41.279 2 0.30055615941262337 0.00036105427849320016 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 53570 5346 KVTEGSFVYK True NCI_RA007_Epitope_Rep3 1156.61282466444 1156.61172993586 28.036 2 0.3005298323029779 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 63100 9555 LNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 1088.58998142532 1088.5888899358602 41.164 2 0.3004837639918411 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 45022 15635 IQLVEEELDR True PC9_epitope_Rep2 1242.6455813446998 1242.64448993586 65.416 2 0.3004631266609754 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 10082 9350 AYVHM[Oxidation]VTHF True PC9_epitope_Rep1 1119.5171508382302 1119.51604993586 40.822 2 0.30041429273900133 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 19975 3627 EM[Oxidation]EAELEDERK True NCI_RA007_Epitope_Rep2 1393.60312485981 1393.60147490379 18.759 3 0.3002471712831514 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 12995 13009 DLQFVEVTDVK True H1975_Epitope_Rep3 1291.6659824361102 1291.6648899358602 55.273 2 0.30016054780087265 0.00036105427849320016 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 108373 8334 TEDQFIRTP True H1975_Epitope_Rep1 1105.54038800017 1105.53928993586 36.988 2 0.30008246557141843 0.00036105427849320016 0.9438714419765777 ['ENSG00000062822|ENST00000440232|POLD1'] 76871 7017 NVIGLQM[Oxidation]GTNR True NCI_RA007_Epitope_Rep1 1217.61865578465 1217.61754993586 31.292 2 0.3000691590533344 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 104872 4751 STESLQANVQR True NCI_RA007_Epitope_Rep5 1231.6156781987497 1231.61458993586 24.959 2 0.30005131569275184 0.00036105427849320016 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 53724 15073 KYEELFPAF True NCI_RA007_Epitope_Rep4 1142.5648118428596 1142.56370993586 65.52 2 0.29998813693959886 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 76319 5931 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 27.798 2 0.29993511625230185 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 135784 8249 YENEVALRQ True PC9_epitope_Rep3 1120.5512870370399 1120.55018993586 36.706 2 0.2999053332597891 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 69878 14547 LYAPYSTHF True PC9_epitope_Rep6 1097.51819600361 1097.5170899358602 67.849 2 0.29990301371390776 0.00036105427849320016 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 40877 6932 HVLVTLGEK True PC9_epitope_Rep4 994.58113061334 994.58002993586 33.895 2 0.29984621368304304 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 107126 16732 SYMLVNENRF True PC9_epitope_Rep2 1271.5968573304701 1271.59576993586 69.607 2 0.2998099236578044 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 114861 13210 TTDLFGRDLSY True H1975_Epitope_Rep3 1286.6142812164198 1286.6131899358602 56.066 2 0.2996894995851957 0.00036105427849320016 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 12858 16739 DLLEVADVLEK True H1975_Epitope_Rep3 1242.67073346338 1242.66962993586 69.913 2 0.29968783271663135 0.00036105427849320016 0.9438714419765777 ['ENST00000509696.5_1_4:7062591-7066009:-|nuORF', 'ENSG00000109519|ENST00000264954|GRPEL1'] 45508 13243 ISESIKELQFY True H1975_Epitope_Rep2 1355.6972825643898 1355.69618993586 56.068 2 0.2996569652930115 0.00036105427849320016 0.9438714419765777 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF', 'ENST00000544507.1_1_11:114319952-114320694:+|nuORF', 'ENST00000539788.5_1_11:114314891-114320694:+|nuORF', 'ENST00000543131.5_1_11:114310234-114320694:+|nuORF', 'ENST00000538403.5_1_11:114314877-114320694:+|nuORF', 'nc|ENSG00000076043|Q9Y3B8-2|REXO2', 'nc|ENSG00000076043|Q9Y3B8-3|REXO2', 'ENSG00000076043|ENST00000265881|REXO2'] 14838 10322 DYETATLSDIK True H1975_Epitope_Rep3 1254.5979624459399 1254.59686993586 44.755 2 0.2995006817015943 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 106283 5154 SVQSDQGYISR True NCI_RA007_Epitope_Rep3 1238.58912909774 1238.58802993586 27.266 2 0.2994936951953413 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 53597 4371 KVVENVIAK True NCI_RA007_Epitope_Rep4 998.6124307416198 998.61132993586 23.161 2 0.2994566560308699 0.00036105427849320016 0.9438714419765777 ['ENSG00000046889|ENST00000288368|PREX2', 'ENST00000517617.1_1_8:68864752-69023167:+|nuORF', 'nc|ENSG00000046889|Q70Z35-3|PREX2', 'ENST00000529398.5_1_8:68864629-69017594:+|nuORF', 'nc|ENSG00000046889|Q70Z35-4|PREX2'] 140622 19681 YYNPHLLLNTL True PC9_epitope_Rep4 1359.7186867153098 1359.7175899358601 83.823 2 0.2994307618866021 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 129188 12343 VTDGAILGKLY True H1975_Epitope_Rep1 1148.6441247927198 1148.64302993586 52.508 2 0.29941629900345323 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant'] 4563 6853 ALAAAGYDVEK True NCI_RA007_Epitope_Rep5 1106.56078909158 1106.5596899358602 33.044 2 0.2993920625033766 0.00036105427849320016 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6'] 65080 15319 LSDLLDWKY True H1975_Epitope_Rep3 1151.58627556343 1151.5851699358602 64.334 2 0.2993523631128463 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 94397 12134 RYFDPANGKF True PC9_epitope_Rep2 1213.5880068989297 1213.5869099358601 51.983 2 0.29931045909511494 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 72338 4202 M[Oxidation]TDIKNDSY True H1975_Epitope_Rep2 1101.46484048185 1101.46374993586 21.27 2 0.29925220892315363 0.00036105427849320016 0.9438714419765777 ['PAQR5|p.S81Y|1|0.07|ENSG00000137819|chr15:69384739-69384739|C/A|missense_variant', 'ENSG00000137819|ENST00000395407|PAQR5'] 84576 17926 QHDFTSQIF True PC9_epitope_Rep5 1121.51417325233 1121.5130699358601 73.969 2 0.2992419738815574 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 61428 14421 LLESLDQLELR True H1975_Epitope_Rep1 1327.7347307022699 1327.73362993586 60.667 2 0.29916792852248286 0.00036105427849320016 0.9438714419765777 ['ENSG00000112208|ENST00000370693|BAG2'] 42672 14964 IEVIEIM[Oxidation]TDR True PC9_epitope_Rep2 1233.62748913285 1233.62638993586 62.817 2 0.2991104482739544 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 24763 20276 FAYDGKDYLTL True PC9_epitope_Rep2 1304.6288686513997 1304.6277699358602 83.413 2 0.29910640842885633 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 52154 16111 KLVILEGELER True PC9_epitope_Rep5 1297.7605515272899 1297.7589149037901 66.961 3 0.29910368228144657 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 129523 9797 VTFNVTTVDTK True NCI_RA007_Epitope_Rep1 1223.63976768827 1223.6386699358602 42.11 2 0.29909290355972296 0.00036105427849320016 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 14221 6694 DSYDSYATHNE True NCI_RA007_Epitope_Rep1 1300.48438924568 1300.48328993586 30.048 2 0.2990659638265984 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'ENST00000591055.5_1_19:1271297-1272439:+|nuORF', 'ENST00000593128.5_1_19:1271297-1272439:+|nuORF'] 139341 4103 YTDSSYEEKKY True H1975_Epitope_Rep2 1411.61434078607 1411.61269490379 20.873 3 0.29903597712275565 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 9781 14211 AYLESFYKF True NCI_RA007_Epitope_Rep3 1166.5648118428599 1166.56370993586 63.205 2 0.29896729454857945 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 67191 11632 LTDIFQHDTY True H1975_Epitope_Rep1 1251.57716743171 1251.57606993586 49.733 2 0.29894616463701035 0.00036105427849320016 0.9438714419765777 ['ENSG00000164366|ENST00000296824|CCDC127'] 136664 8362 YIDQGRNPQLY True H1975_Epitope_Rep2 1365.66771377161 1365.6666099358602 37.117 2 0.29893824711033806 0.00036105427849320016 0.9438714419765777 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000503112.1_1_5:6372618-6374583:-|nuORF'] 4767 6965 ALEEPDDQNRI True NCI_RA007_Epitope_Rep5 1298.6102584651396 1298.60916993586 33.475 2 0.29865791348977555 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072694|P31994-5|FCGR2B', 'nc|ENSG00000072694|P31994-2|FCGR2B', 'nc|ENSG00000072694|P31994-3|FCGR2B', 'nc|ENSG00000072694|P31994-4|FCGR2B', 'ENSG00000072694|ENST00000358671|FCGR2B', 'ENST00000480308.5_1_1:161647083-161647340:+|nuORF'] 46219 9188 ITDPDPDIRY True H1975_Epitope_Rep1 1203.57716743171 1203.57606993586 40.248 2 0.2985690596468534 0.00036105427849320016 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 43892 14066 ILDLISESPIK True H1975_Epitope_Rep1 1226.7122043525399 1226.7111099358601 59.271 2 0.29855405961804465 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 5793 13039 APFDLFENK True H1975_Epitope_Rep3 1079.52876068731 1079.52766993586 55.394 2 0.29854437216474733 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 139321 7148 YTDQFSRNY True H1975_Epitope_Rep2 1192.51490152832 1192.51380993586 32.43 2 0.2985212799611182 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 107306 8046 SYRDSYESY True PC9_epitope_Rep4 1168.4672826295598 1168.46618993586 38.399 2 0.29847934587888436 0.00036105427849320016 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 134895 11396 YADNQVMHFY True H1975_Epitope_Rep3 1286.5390081011801 1286.5379099358602 48.948 2 0.2984509395005454 0.00036105427849320016 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 140737 12154 YYQNYFEKL True NCI_RA007_Epitope_Rep3 1266.5920892198599 1266.59098993586 54.928 2 0.2983434438856253 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 140471 22052 YYIDADLLREI True PC9_epitope_Rep5 1382.7081816012599 1382.70708993586 89.85 2 0.2983209927549209 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138750|Q7Z3B4-2|NUP54', 'nc|ENSG00000138750|Q7Z3B4-3|NUP54', 'ENSG00000138750|ENST00000264883|NUP54'] 52150 16214 KLVILEGELER True PC9_epitope_Rep1 1297.7605515272899 1297.7589149037901 67.184 3 0.29829568235877046 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 14710 9466 DVQM[Oxidation]LQDAISK True NCI_RA007_Epitope_Rep2 1262.6176527251398 1262.6165499358601 41.431 2 0.29827924799885425 0.00036105427849320016 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 9596 6555 AYEAELGDAR True NCI_RA007_Epitope_Rep2 1093.50400249145 1093.50290993586 30.111 2 0.29823397115591116 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 53576 5511 KVTEGSFVYK True NCI_RA007_Epitope_Rep5 1156.61282466444 1156.61116490379 27.886 3 0.2981926134741998 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 132078 6879 VYIKHPVSL True NCI_RA007_Epitope_Rep5 1054.61751612206 1054.61640993586 33.14 2 0.2981802999044078 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 89837 21305 RFLDDLGLKF True PC9_epitope_Rep1 1222.6710082468996 1222.66936490379 86.778 3 0.2981458754349686 0.00036105427849320016 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 54617 12737 LADIYRELY True H1975_Epitope_Rep3 1154.5971746003 1154.5960699358602 54.204 2 0.2981039009947059 0.00036105427849320016 0.9438714419765777 ['ENSG00000162227|ENST00000294168|TAF6L'] 106599 5569 SVYYNEATGGK True NCI_RA007_Epitope_Rep2 1187.5458673034298 1187.5447699358601 26.278 2 0.2979631187299246 0.00036105427849320016 0.9438714419765777 ['ENSG00000196230|ENST00000327892|TUBB'] 37243 6746 GVVEVTHDLQK True NCI_RA007_Epitope_Rep2 1223.6510010783097 1223.64990993586 30.854 2 0.29795453188793053 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 39373 11290 HLVDEPQNLIK True PC9_epitope_Rep4 1304.7088503076 1304.7072149037901 51.205 3 0.2978970293438906 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 45492 9093 ISEQTGKELLY True H1975_Epitope_Rep1 1279.66598243611 1279.6648899358602 39.88 2 0.2978726050041673 0.00036105427849320016 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 135774 5910 YENEVALRQ True H1975_Epitope_Rep2 1120.5512870370399 1120.55018993586 27.719 2 0.2978201981968076 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 140421 19996 YYFEGIKQTF True PC9_epitope_Rep1 1294.6233893481397 1294.6222899358602 81.742 2 0.29777290554061436 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 56065 16614 LDLDGIIAEVK True NCI_RA007_Epitope_Rep2 1184.66525416012 1184.66414993586 69.355 2 0.29775547325115287 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 104869 4674 STESLQANVQR True H1975_Epitope_Rep3 1231.6156781987497 1231.61458993586 23.102 2 0.29773740836482254 0.00036105427849320016 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 22238 8749 ETDNMFNRY True H1975_Epitope_Rep2 1188.48697252832 1188.4858699358601 38.615 2 0.2977083377229963 0.00036105427849320016 0.9438714419765777 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF'] 53883 13412 KYIDQKFVL True PC9_epitope_Rep4 1152.6542955536 1152.6531899358602 59.49 2 0.2976389992440141 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 108394 17217 TEDYLSLILNR True NCI_RA007_Epitope_Rep2 1335.7034305739899 1335.70232993586 71.708 2 0.2975478998309282 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 25824 10018 FGEENIEVYHS True H1975_Epitope_Rep3 1322.5778957077 1322.57678993586 43.572 2 0.29754399953385063 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 139121 7685 YSQADALKY True H1975_Epitope_Rep2 1057.50802524273 1057.5069299358602 34.512 2 0.29752459573240225 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108799|Q92800-5|EZH1', 'nc|ENSG00000108799|Q92800-4|EZH1', 'nc|ENSG00000106462|Q15910-5|EZH2', 'nc|ENSG00000108799|Q92800-3|EZH1', 'nc|ENSG00000106462|Q15910-3|EZH2', 'nc|ENSG00000106462|Q15910-4|EZH2', 'nc|ENSG00000106462|Q15910|EZH2', 'ENSG00000108799|ENST00000428826|EZH1', 'nc|ENSG00000108799|Q92800-2|EZH1', 'ENST00000586714.1_1_17:40854552-40854989:-|nuORF', 'ENST00000492143.5_1_7:148504740-148513906:-|nuORF', 'ENSG00000106462|ENST00000320356|EZH2', 'ENST00000431167.1_1_21:36972032-36972302:-|nuORF'] 47811 11049 IYSEEIVEM[Oxidation]YK True NCI_RA007_Epitope_Rep1 1418.66393421122 1418.6628299358601 46.973 2 0.29749724913323616 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 38396 7888 HGIPIPVTPK True NCI_RA007_Epitope_Rep2 1057.62841515893 1057.62730993586 35.314 2 0.29745490878920844 0.00036105427849320016 0.9438714419765777 ['ENSG00000130707|ENST00000352480|ASS1', 'ENST00000467695.5_1_9:133333919-133355188:+|nuORF'] 117038 8009 TYQEVAQKF True NCI_RA007_Epitope_Rep5 1112.5502244078798 1112.54912993586 37.499 2 0.29741149333447103 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 132357 15067 VYMDWYEKF True NCI_RA007_Epitope_Rep4 1279.5583465634297 1279.55724993586 65.492 2 0.2974042543473626 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 132344 19437 VYLQNWSHVL True PC9_epitope_Rep4 1257.65060715549 1257.6495099358601 82.877 2 0.2973895866546999 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 139665 11693 YTSYPMHDFY True H1975_Epitope_Rep2 1322.52777471114 1322.5266699358601 50.052 2 0.2973774310763707 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 76366 13921 NSFVNDIFER True NCI_RA007_Epitope_Rep2 1239.5884008217497 1239.58730993586 58.805 2 0.29725534829316747 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 112390 9164 TNEGVIEFR True NCI_RA007_Epitope_Rep1 1063.52982331647 1063.5287299358602 39.647 2 0.29723904312335403 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6'] 69189 12143 LVMEEAPESYK True PC9_epitope_Rep5 1294.6115043350999 1294.6104099358602 51.698 2 0.2971933106083724 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 132361 20711 VYMDWYEKF True PC9_epitope_Rep2 1279.5583465634297 1279.55724993586 85.101 2 0.29715868143716234 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 52826 20197 KQVEEIFNLKF True PC9_epitope_Rep1 1393.7605515272896 1393.7594499358602 82.517 2 0.2971469308480488 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 32143 20905 GFAFVTFDDHD True PC9_epitope_Rep5 1269.5302172392899 1269.52912993586 85.466 2 0.2971393849132816 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 19687 17209 ELSDFISYLQR True NCI_RA007_Epitope_Rep1 1369.68778050985 1369.6866899358602 71.071 2 0.297052399051537 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 79007 18239 PFLQASPHF True PC9_epitope_Rep3 1042.5236157372199 1042.5225099358602 75.367 2 0.2970485151925919 0.00036105427849320016 0.9438714419765777 ['ENSG00000147689|ENST00000690554|FAM83A'] 27756 11719 FQEAEEFLYR True H1975_Epitope_Rep3 1330.61936659686 1330.61826993586 50.218 2 0.29699159787482116 0.00036105427849320016 0.9438714419765777 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000560592.5_1_14:24614852-24615790:-|nuORF', 'ENST00000559493.5_1_14:24614434-24615772:-|nuORF'] 77363 16298 NYLNHWNHF True PC9_epitope_Rep5 1243.55229009655 1243.55118993586 67.684 2 0.2969721230784662 0.00036105427849320016 0.9438714419765777 ['ENSG00000167363|ENST00000300784|FN3K'] 106095 9527 SVMSTVEWNK True NCI_RA007_Epitope_Rep4 1179.5594091925898 1179.55830993586 43.497 2 0.2968404596150539 0.00036105427849320016 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 15162 7029 EAESSPFVER True NCI_RA007_Epitope_Rep1 1149.5302172392899 1149.52912993586 31.338 2 0.2968403836107134 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 53434 13151 KVIDDTNITRL True PC9_epitope_Rep5 1286.7194149913 1286.71777490379 55.589 3 0.2968321498756849 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 70267 15260 LYNPKITSEL True PC9_epitope_Rep2 1176.63903941228 1176.6379499358602 63.973 2 0.2967928204095693 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 52828 19790 KQVEEIFNLKF True PC9_epitope_Rep2 1393.7605515272896 1393.7594499358602 81.511 2 0.2967128434588543 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 110321 5701 TIIQNPTDQQK True H1975_Epitope_Rep3 1284.66737941844 1284.66628993586 26.96 2 0.29668694558249575 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000552528.1_1_12:56503657-56504297:+|nuORF'] 131992 20484 VYGNERFIQYL True PC9_epitope_Rep1 1400.7088503075997 1400.7077499358602 83.604 2 0.2965520542424339 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000528411.1_1_11:85734561-85780352:-|nuORF'] 114894 17220 TTEFLYNLY True H1975_Epitope_Rep2 1162.5546410819798 1162.55354993586 71.527 2 0.29650475730105474 0.00036105427849320016 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF', 'ENST00000474114.5_1_21:45744937-45745285:+|nuORF', 'ENST00000495274.1_1_21:45742848-45745285:+|nuORF'] 94395 13656 RYFDPANGKF True PC9_epitope_Rep1 1213.5880068989297 1213.5869099358601 57.383 2 0.2964059835211129 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 55966 10028 LDIDSPPITAR True H1975_Epitope_Rep3 1196.6401020414398 1196.63900993586 43.608 2 0.2963920943305779 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 101573 9964 SPDQLADLYK True H1975_Epitope_Rep1 1148.5713537752797 1148.5702499358601 43.263 2 0.296361325660735 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 133533 16459 WHHTFYNEL True PC9_epitope_Rep5 1245.55670677065 1245.55560993586 68.307 2 0.2963195103976198 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 43638 19576 IILEEGKEILV True PC9_epitope_Rep2 1254.7435044808199 1254.74240993586 80.68 2 0.2963172746515838 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 84936 20927 QHVQEWWEL True PC9_epitope_Rep1 1253.5829215184897 1253.58182993586 85.317 2 0.2962787493450058 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion'] 61337 9582 LLEELEEGQK True NCI_RA007_Epitope_Rep1 1186.60813320682 1186.60702993586 41.271 2 0.29623176804990353 0.00036105427849320016 0.9438714419765777 ['ENSG00000169139|ENST00000523111|UBE2V2', 'UBE2V2|p.R14L|1|0.27|ENSG00000169139|chr8:48043057-48043057|G/T|missense_variant', 'ENST00000470565.5_1_20:48713044-48729665:-|nuORF', 'ENST00000490289.5_1_20:48711880-48729665:-|nuORF', 'nc|ENSG00000244687|Q13404-8|UBE2V1', 'nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF'] 53960 13438 KYITQGQLLQF True NCI_RA007_Epitope_Rep4 1337.73433677945 1337.7332299358602 58.878 2 0.2962054444183658 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 45806 13253 ISPDQLADLYK True NCI_RA007_Epitope_Rep2 1261.6554177524097 1261.65432993586 56.185 2 0.2961892655296284 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 90061 13825 RGLDDIKDLKV True PC9_epitope_Rep2 1270.7245003717399 1270.72285490379 58.462 3 0.2960881308867627 0.00036105427849320016 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF'] 94409 13619 RYFDPANGKF True PC9_epitope_Rep5 1213.5880068989297 1213.5869099358601 57.408 2 0.2960698199696628 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 72597 4140 MVSAEISENRK True NCI_RA007_Epitope_Rep4 1262.6288857347397 1262.6272349037902 22.215 3 0.2960593119568192 0.00036105427849320016 0.9438714419765777 ['SDE2|p.A423Qfs*24|1|0.51|ENSG00000143751|chr1:225985391-225985391|C/-|frameshift_variant', 'SDE2|p.H292Lfs*32|1|0.26|ENSG00000143751|chr1:225988134-225988155|GCACATGAGTCTTCTAAAATAT/-|frameshift_variant', 'nc|ENSG00000143751|Q6IQ49-3|SDE2', 'nc|ENSG00000143751|Q6IQ49-2|SDE2', 'ENSG00000143751|ENST00000272091|SDE2'] 135787 6546 YENEVALRQ True PC9_epitope_Rep6 1120.5512870370399 1120.55018993586 33.859 2 0.29602619674377484 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 129387 9612 VTEGGEPYRLY True H1975_Epitope_Rep2 1282.61936659686 1282.61826993586 41.949 2 0.29582851704627633 0.00036105427849320016 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 14708 9818 DVQM[Oxidation]LQDAISK True NCI_RA007_Epitope_Rep1 1262.6176527251398 1262.6165499358601 42.193 2 0.2957764657932095 0.00036105427849320016 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 16765 8346 EFDELNPSAQR True H1975_Epitope_Rep1 1304.5996937814398 1304.5985899358602 37.034 2 0.29571262949169547 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2'] 41859 18759 IDTIEIITDR True PC9_epitope_Rep5 1187.63976768827 1187.6386699358602 77.167 2 0.29570556508494883 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 52827 19788 KQVEEIFNLKF True PC9_epitope_Rep2 1393.7605515272896 1393.7589149037901 81.503 3 0.29568195957191123 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 48314 11101 KDQIYDIFQK True NCI_RA007_Epitope_Rep2 1296.6714021697196 1296.6703099358601 47.762 2 0.29561733123607753 0.00036105427849320016 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 52149 12826 KLVIIESDLER True PC9_epitope_Rep4 1313.75546614685 1313.75383490379 57.198 3 0.2955749680206557 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 27670 16718 FQDENHLYL True PC9_epitope_Rep1 1177.54038800017 1177.53928993586 69.134 2 0.29553880157521634 0.00036105427849320016 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 25819 6932 FGDPVVQSDM[Oxidation]K True NCI_RA007_Epitope_Rep2 1237.56488887629 1237.56378993586 31.584 2 0.295522614346304 0.00036105427849320016 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 139298 19131 YTDLLRLFEY True H1975_Epitope_Rep2 1331.67615319699 1331.6750499358602 79.405 2 0.29551574236419587 0.00036105427849320016 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB'] 101998 7922 SPNSYFM[Oxidation]DVK True H1975_Epitope_Rep1 1202.52777509158 1202.5266699358601 35.423 2 0.2954381042017379 0.00036105427849320016 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 105890 20924 SVLDDNKLLTL True PC9_epitope_Rep1 1229.68671788069 1229.68562993586 85.305 2 0.29543780485249477 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 83603 4458 QDVDNASLAR True NCI_RA007_Epitope_Rep4 1087.52580056519 1087.52470993586 23.522 2 0.2954367660221659 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 52800 11826 KQTALVELLK True PC9_epitope_Rep6 1141.7070594024499 1141.7054249037901 56.694 3 0.29542197803470194 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 43640 18868 IILEEGKEILV True PC9_epitope_Rep4 1254.7435044808199 1254.74240993586 80.662 2 0.29537161989910793 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 89025 7604 REEEEKLLHLA True H1975_Epitope_Rep1 1365.7252286477299 1365.72358490379 34.239 3 0.29536954779161173 0.00036105427849320016 0.9438714419765777 ['ENSG00000096401|ENST00000371477|CDC5L'] 132143 10082 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5287299358602 43.651 2 0.2953484139873784 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 28930 7263 FTENDKEYQEY True H1975_Epitope_Rep3 1464.6045043783597 1464.60340993586 32.91 2 0.2953395134114166 0.00036105427849320016 0.9438714419765777 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 48877 6797 KESYSVYVYK True NCI_RA007_Epitope_Rep4 1264.6339540318397 1264.6328499358601 32.77 2 0.2953366899943591 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 112745 7453 TPKMPGQSV True PC9_epitope_Rep3 943.47970231991 943.47860993586 33.672 2 0.29532188876735244 0.00036105427849320016 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000420969.1_1_2:162357792-162360000:-|nuORF'] 69845 11763 LYADVGGKQF True PC9_epitope_Rep6 1096.55530978832 1096.5542099358602 56.408 2 0.2953134218533461 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 68174 4787 LTQDQDVDVK True NCI_RA007_Epitope_Rep2 1159.57208205127 1159.57098993586 23.25 2 0.29525119471347394 0.00036105427849320016 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 94720 11442 RYLEQLHQL True PC9_epitope_Rep4 1198.64585612822 1198.64422490379 51.78 3 0.2951943820652734 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 23465 10481 EVYELLDSPGK True H1975_Epitope_Rep1 1248.6237832709596 1248.62268993586 45.27 2 0.29518592685747014 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 72683 18081 MYINEVERL True PC9_epitope_Rep1 1165.58014463717 1165.5790499358602 74.341 2 0.29518496705934205 0.00036105427849320016 0.9438714419765777 ['ENSG00000152104|ENST00000366956|PTPN14', 'PTPN14|p.H1030Afs*47|1|0.17|ENSG00000152104|chr1:214369641-214369642|-/T|frameshift_variant', 'PTPN14|p.D213Y|1|0.54|ENSG00000152104|chr1:214401717-214401717|C/A|missense_variant'] 25818 7003 FGDPVVQSDM[Oxidation]K True NCI_RA007_Epitope_Rep1 1237.56488887629 1237.56378993586 31.238 2 0.29517762257123165 0.00036105427849320016 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 79540 5808 PGSEETQTLVR True NCI_RA007_Epitope_Rep2 1215.6095301891498 1215.6084299358602 27.21 2 0.29516599272287136 0.00036105427849320016 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 135726 5526 YEKEEDWRNAA True H1975_Epitope_Rep2 1409.62115750201 1409.61952490379 26.263 3 0.29505684491299744 0.00036105427849320016 0.9438714419765777 ['ENSG00000138663|ENST00000264389|COPS4', 'nc|ENSG00000138663|Q9BT78-2|COPS4', 'ENST00000506443.5_1_4:83956377-83978089:+|nuORF'] 48872 7259 KESYSVYVYK True NCI_RA007_Epitope_Rep1 1264.6339540318397 1264.63231490379 32.226 3 0.2949725740754229 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 137144 10721 YLDNVIGHSY True H1975_Epitope_Rep1 1179.55603806431 1179.5549499358601 46.2 2 0.29496668921275826 0.00036105427849320016 0.9438714419765777 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'TRMT6|p.L275Ffs*10|1|0.1|ENSG00000089195|chr20:5942625-5942629|AAGAT/-|frameshift_variant', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 136005 15238 YFINRSWEW True NCI_RA007_Epitope_Rep4 1299.6036569630699 1299.60254993586 66.246 2 0.29491511283624294 0.00036105427849320016 0.9438714419765777 ['ENSG00000064763|ENST00000536681|FAR2', 'nc|ENSG00000064763|Q96K12-2|FAR2'] 140620 20395 YYNPHLLLNTL True PC9_epitope_Rep2 1359.7186867153098 1359.7175899358601 83.875 2 0.294853655377519 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 118663 9495 VEAQLQELQVK True NCI_RA007_Epitope_Rep2 1283.7085159544297 1283.7074099358601 41.546 2 0.29480194974107116 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 128455 10260 VSERDVYLTY True H1975_Epitope_Rep2 1243.6084675599898 1243.60736993586 44.471 2 0.29479835581019576 0.00036105427849320016 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD', 'ENST00000472677.1_1_22:50636123-50636456:+|nuORF'] 112385 5167 TNEAQAIETAR True H1975_Epitope_Rep3 1202.58912909774 1202.58802993586 24.975 2 0.2947762225408536 0.00036105427849320016 0.9438714419765777 ['ENSG00000177889|ENST00000318066|UBE2N', 'nc|ENSG00000276380|Q5JXB2|UBE2NL'] 112590 8941 TPAQFDADELR True H1975_Epitope_Rep3 1261.5938801250097 1261.59278993586 39.388 2 0.29473918223471807 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 27335 8013 FMEKETPLRY True H1975_Epitope_Rep1 1312.6485585501598 1312.64692490379 35.766 3 0.2947184505835305 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1'] 104816 12845 STDVSDLLHQY True H1975_Epitope_Rep3 1276.5935457718401 1276.59244993586 54.63 2 0.29470477725523064 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 9867 14975 AYMPHTFFI True NCI_RA007_Epitope_Rep4 1125.53173789277 1125.53064993586 65.065 2 0.2946872431557834 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 73918 17118 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69592490379 70.998 3 0.29462092491227776 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 13713 18740 DQIAKYWEL True PC9_epitope_Rep6 1164.5815245361598 1164.5804299358601 84.723 2 0.2945913053742487 0.00036105427849320016 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 90906 5558 RLDTDHLRY True H1975_Epitope_Rep2 1187.60471959223 1187.60308490379 26.387 3 0.29456994746371423 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1'] 71729 3565 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1273.50672275761 1273.50562993586 18.686 2 0.29456592857239533 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 13924 18976 DRFFSEYEKL True PC9_epitope_Rep1 1332.6350166609998 1332.6333749037901 77.777 3 0.29454439080557343 0.00036105427849320016 0.9438714419765777 ['ENSG00000135932|ENST00000258418|CAB39'] 139813 19817 YVDDTQFVRF True PC9_epitope_Rep3 1288.60880191316 1288.6077099358602 81.459 2 0.29443738461057783 0.00036105427849320016 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 54333 6040 KYQEVTNNL True NCI_RA007_Epitope_Rep3 1107.5560380643099 1107.5549499358601 30.738 2 0.2944103413556982 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 76323 6721 NSEEMKEAYY True H1975_Epitope_Rep2 1262.5125185698198 1262.5114299358602 30.766 2 0.2944082846914327 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 132447 10463 VYNSEYYHF True NCI_RA007_Epitope_Rep4 1220.5138388991602 1220.51274993586 47.095 2 0.29439301127804496 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 23540 21819 EWSPYTKIFQF True PC9_epitope_Rep2 1444.7027022979998 1444.70160993586 89.4 2 0.2943572985480982 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 74842 15896 NLQEAEEWYK True PC9_epitope_Rep1 1308.59863115228 1308.5975299358602 65.954 2 0.29434257254268487 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 48656 8459 KELEEIVQP True NCI_RA007_Epitope_Rep3 1083.5811901829898 1083.58008993586 40.355 2 0.29433099203255425 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000509378.1_1_4:165110937-165111516:+|nuORF'] 97849 5680 SHITPSTQQHL True PC9_epitope_Rep1 1247.62584895963 1247.62420490379 26.671 3 0.2942787198063803 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 52754 19342 KQMEQISQFL True PC9_epitope_Rep5 1250.6329084860197 1250.63180993586 79.443 2 0.2942772160400335 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 53399 5204 KVFAGYYTK True NCI_RA007_Epitope_Rep3 1075.57023157647 1075.56912993586 27.468 2 0.29419933904565915 0.00036105427849320016 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 116994 21203 TYQDIFRDF True PC9_epitope_Rep1 1203.5560380643099 1203.5549499358601 86.388 2 0.29413925378025596 0.00036105427849320016 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 65425 4773 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 23.449 2 0.2940881782978733 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 105056 18755 STIRLLTSL True PC9_epitope_Rep4 1002.60734536118 1002.60624993586 80.223 2 0.2940371594157342 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 140428 18885 YYFEGIKQTF True PC9_epitope_Rep4 1294.6233893481397 1294.6222899358602 80.727 2 0.29397098245230663 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 25458 11593 FEM[Oxidation]SDFIVDTR True NCI_RA007_Epitope_Rep2 1374.6125673446998 1374.6114699358602 49.684 2 0.2939638949584857 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 2325 7627 AEQDELSQRLA True H1975_Epitope_Rep3 1258.61534384558 1258.61424993586 34.319 2 0.2939350156238373 0.00036105427849320016 0.9438714419765777 ['ENSG00000255112|ENST00000526991|CHMP1B'] 33985 17574 GNFNYVEFTR True PC9_epitope_Rep3 1245.5778361380499 1245.5767299358602 72.787 2 0.293927912229717 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 67391 13426 LTDYDIRFY True H1975_Epitope_Rep1 1204.57643915572 1204.57534993586 56.756 2 0.29391827147505045 0.00036105427849320016 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1'] 93754 3063 RTSEIYVHR True NCI_RA007_Epitope_Rep5 1159.6098049726697 1159.60816490379 16.972 3 0.2939166796843698 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 85385 4637 QLEEAEEEAQR True H1975_Epitope_Rep3 1330.60008770426 1330.5989899358601 22.957 2 0.29386021176799676 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 22318 12100 ETEEGIYWRY True H1975_Epitope_Rep2 1344.5986311522797 1344.5975299358602 51.626 2 0.293837930886164 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131650|Q8NCW0-6|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-4|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-3|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-5|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-2|KREMEN2', 'ENSG00000131650|ENST00000303746|KREMEN2'] 94015 6403 RVQEAVESMVK True NCI_RA007_Epitope_Rep5 1274.66527124346 1274.66362490379 31.301 3 0.2938374410166082 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 114921 7913 TTEVHPELY True H1975_Epitope_Rep3 1087.5185899264297 1087.51748993586 35.411 2 0.2937870281297506 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 131916 9409 VYERELQTF True NCI_RA007_Epitope_Rep4 1183.5873381925899 1183.58624993586 43.05 2 0.29378670691991815 0.00036105427849320016 0.9438714419765777 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 131995 20409 VYGNERFIQYL True PC9_epitope_Rep5 1400.7088503075997 1400.7077499358602 83.542 2 0.2937579139439694 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000528411.1_1_11:85734561-85780352:-|nuORF'] 120520 21391 VFYPYPQYF True PC9_epitope_Rep4 1222.5698972232997 1222.5688099358601 90.449 2 0.293754144467856 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 132404 13260 VYNENLVHM[Oxidation]I True PC9_epitope_Rep4 1246.60160873818 1246.6005099358601 58.903 2 0.29374443341322753 0.00036105427849320016 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 114376 9510 TSDHFETIMKY True H1975_Epitope_Rep2 1370.6176523446998 1370.61601490379 41.549 3 0.2937214767962604 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 70627 19075 M[Oxidation]ALDIEIATYR True PC9_epitope_Rep1 1310.6540382338599 1310.65294993586 78.161 2 0.29363167546457114 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 140746 19274 YYQNYFEKL True PC9_epitope_Rep5 1266.5920892198599 1266.59098993586 79.18 2 0.29360720366132903 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 77429 15610 NYNEKIYEL True PC9_epitope_Rep1 1184.5713537752797 1184.5702499358601 64.865 2 0.29360027852861 0.00036105427849320016 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 4812 4857 ALEQQVEEM[Oxidation]K True H1975_Epitope_Rep3 1219.5754535599897 1219.57434993586 23.808 2 0.2935494986011799 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 43639 19846 IILEEGKEILV True PC9_epitope_Rep3 1254.7435044808199 1254.74240993586 81.573 2 0.2935422885874068 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 48667 7815 KELEPLKEMTA True H1975_Epitope_Rep1 1287.67443894483 1287.6733499358602 35.015 2 0.29351934013559505 0.00036105427849320016 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A'] 135101 14486 YALYDATYETK True PC9_epitope_Rep5 1336.61869789052 1336.6176099358602 60.722 2 0.2934609424709597 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 20919 9381 EQVANSAFVER True PC9_epitope_Rep1 1248.6098645423197 1248.6087699358602 40.942 2 0.2934386434128973 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 28775 7525 FTDEEGYGRY True H1975_Epitope_Rep3 1235.50948179471 1235.5083899358601 33.925 2 0.29337553394660565 0.00036105427849320016 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 69221 16971 LVNELTEFAK True PC9_epitope_Rep2 1162.6233893481399 1162.6222899358602 70.525 2 0.29333138440688555 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 11839 18233 DHMRFISEL True PC9_epitope_Rep5 1146.54917886206 1146.5480899358602 75.146 2 0.29323635773819606 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 105891 20636 SVLDDNKLLTL True PC9_epitope_Rep2 1229.68671788069 1229.68562993586 84.811 2 0.29319913342042286 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 94140 21571 RWFQPAIPSW True PC9_epitope_Rep3 1286.6560268890996 1286.65492993586 88.267 2 0.2931438820365045 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 4814 5495 ALEQQVEEM[Oxidation]K True NCI_RA007_Epitope_Rep1 1219.5754535599897 1219.57434993586 25.445 2 0.29310545143198646 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 24840 6820 FDDAVVQSDM[Oxidation]K True NCI_RA007_Epitope_Rep1 1269.55471811541 1269.55362993586 30.535 2 0.2930192524895505 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000533238.5_1_11:122929516-122932032:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 126315 12173 VPIYEGYALPH True H1975_Epitope_Rep1 1257.63937376545 1257.63826993586 51.842 2 0.29301568188978977 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 129429 14271 VTEITDDLHFY True H1975_Epitope_Rep2 1351.6295969273901 1351.6284899358602 60.044 2 0.29297155234081057 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 112464 7729 TNQELQEINR True PC9_epitope_Rep1 1243.61567819875 1243.61458993586 34.55 2 0.29296737065604733 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 67035 20281 LTAPEDVFSKL True PC9_epitope_Rep2 1218.6496040959798 1218.6485099358601 83.432 2 0.29277727957736804 0.00036105427849320016 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 14664 22023 DVNFEFPEFQL True NCI_RA007_Epitope_Rep2 1383.63468230783 1383.63358993586 91.349 2 0.2927721843809749 0.00036105427849320016 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 53395 6239 KVEAFQTTISK True NCI_RA007_Epitope_Rep1 1250.6870522338602 1250.6854049037902 28.302 3 0.2927008329732911 0.00036105427849320016 0.9438714419765777 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000442824.1_1_5:97549420-97549822:+|nuORF', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000559359.1_1_14:24613399-24613677:-|nuORF', 'ENST00000453033.1_1_13:49345602-49345743:+|nuORF'] 71726 5751 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 27.148 2 0.2926939993302212 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 139466 11066 YTFSSIEREEY True H1975_Epitope_Rep2 1422.63032520338 1422.6292299358602 47.597 2 0.29269277236160796 0.00036105427849320016 0.9438714419765777 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 139266 9764 YTDFDGTRVY True H1975_Epitope_Rep2 1235.54586730343 1235.5447699358601 42.546 2 0.2926858888668507 0.00036105427849320016 0.9438714419765777 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 30143 20036 FYQRFPLSF True PC9_epitope_Rep4 1203.6076797143498 1203.60658993586 85.206 2 0.29266136905907836 0.00036105427849320016 0.9438714419765777 ['ENSG00000134109|ENST00000256497|EDEM1', 'ENST00000443790.1_1_3:5229490-5231099:+|nuORF'] 5777 10271 APELLYYANK True H1975_Epitope_Rep3 1180.61282466444 1180.61172993586 44.558 2 0.2926447339816743 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 48597 5898 KEIEEYIHKP True H1975_Epitope_Rep3 1284.6714021697198 1284.66976490379 27.698 3 0.292590307624749 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 56671 7130 LEAANGELEVK True H1975_Epitope_Rep3 1171.6084675599898 1171.60736993586 32.398 2 0.2925887029245778 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 132127 7377 VYISEHEHF True NCI_RA007_Epitope_Rep2 1159.5298233164701 1159.5287299358602 33.319 2 0.2925703647672581 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 45356 12477 ISDGKEYLFY True H1975_Epitope_Rep2 1233.5917548666898 1233.59064993586 53.083 2 0.292556144999613 0.00036105427849320016 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 77510 15329 NYQGHFHLF True PC9_epitope_Rep2 1161.5355774032498 1161.5344899358602 64.243 2 0.2925226948619818 0.00036105427849320016 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 48591 5677 KEIEEYIHKP True H1975_Epitope_Rep1 1284.6714021697198 1284.66976490379 26.903 3 0.292505989092435 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 10861 10900 DALNIETAIK True H1975_Epitope_Rep1 1086.5920892198599 1086.59098993586 46.889 2 0.2924988989608059 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 21971 5875 ESLQQM[Oxidation]AEVTR True H1975_Epitope_Rep3 1306.6187153542999 1306.6176099358602 27.609 2 0.2924864782562043 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 5744 13044 APDFVFYAPR True H1975_Epitope_Rep1 1181.5869442697697 1181.58584993586 55.259 2 0.292477980603988 0.00036105427849320016 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR', 'ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'RDX|p.E461Kfs*3|1|0.1|ENSG00000137710|chr11:110233447-110233447|G/-|frameshift_variant', 'ENSG00000147065|ENST00000360270|MSN'] 129427 14079 VTEITDDLHFY True H1975_Epitope_Rep1 1351.6295969273901 1351.6284899358602 59.321 2 0.29246554333087404 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 53615 5685 KVYNGILEK True NCI_RA007_Epitope_Rep4 1062.6073453611798 1062.6062499358602 28.476 2 0.29245649340539354 0.00036105427849320016 0.9438714419765777 ['ENSG00000109689|ENST00000467087|STIM2', 'ENST00000467011.5_1_4:27022655-27024615:+|nuORF', 'nc|ENSG00000109689|Q9P246-2|STIM2'] 23391 4911 EVVEEAENGR True PC9_epitope_Rep1 1130.5203808315798 1130.5192899358601 23.754 2 0.29244207890621815 0.00036105427849320016 0.9438714419765777 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 133692 20169 WLAEKLPTL True PC9_epitope_Rep2 1069.61718176889 1069.6160899358601 82.993 2 0.29240356258294037 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 135246 12133 YAYDGKDYLAL True NCI_RA007_Epitope_Rep3 1290.6132185872598 1290.6121299358601 54.839 2 0.2924032429501806 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 110155 8422 TIDDLEDKLK True H1975_Epitope_Rep1 1188.62378327096 1188.6221249037899 37.322 3 0.2923568270604042 0.00036105427849320016 0.9438714419765777 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF'] 21880 11171 ESENVVCHFY True H1975_Epitope_Rep2 1225.50737361973 1225.50626993586 48.006 2 0.2923419103567583 0.00036105427849320016 0.9438714419765777 ['ENST00000463385.5_1_2:99938416-99949470:-|nuORF', 'nc|ENSG00000115514|O14530-2|TXNDC9', 'ENSG00000115514|ENST00000264255|TXNDC9'] 94855 12554 RYMPQNPHII True PC9_epitope_Rep5 1267.6495616096697 1267.64791490379 53.288 3 0.29231930087557845 0.00036105427849320016 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 40581 13362 HTDDPLTWDY True H1975_Epitope_Rep2 1261.52513185885 1261.5240299358602 56.529 2 0.2922682585139746 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 28374 5115 FSDNQLQEGK True H1975_Epitope_Rep3 1164.54111627616 1164.54000993586 24.785 2 0.29226475661506696 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 139778 9927 YVDDASWM[Oxidation]RY True H1975_Epitope_Rep1 1320.54448778488 1320.5433899358602 43.121 2 0.29223503946762236 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 11384 6779 DFHVDEQTTVK True NCI_RA007_Epitope_Rep2 1317.62009487285 1317.61843490379 30.984 3 0.2921574953025176 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 47844 13229 IYSVFRNAASF True NCI_RA007_Epitope_Rep4 1273.6455217750497 1273.6444299358602 58.013 2 0.29214359988738814 0.00036105427849320016 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 73018 14406 NDEELNKLLGK True PC9_epitope_Rep3 1271.6721304457099 1271.67049490379 60.511 3 0.2920261725910139 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 87694 13097 QVDPLSALKY True H1975_Epitope_Rep3 1132.6128246644398 1132.61172993586 55.623 2 0.29201055570647044 0.00036105427849320016 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 94123 19098 RWFDKSFTF True PC9_epitope_Rep4 1232.59784330664 1232.59674993586 81.551 2 0.2920102436013952 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 32214 14696 GFGFVTFDDHD True H1975_Epitope_Rep3 1255.51456717515 1255.51346993586 61.9 2 0.29197586842431134 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 94005 6999 RVQEAVESMVK True NCI_RA007_Epitope_Rep1 1274.66527124346 1274.6641699358602 31.223 2 0.2919169735251349 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 95533 7622 SAQSFFENK True NCI_RA007_Epitope_Rep4 1056.48762415132 1056.48652993586 35.971 2 0.29190669757879945 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 52825 20191 KQVEEIFNLKF True PC9_epitope_Rep1 1393.7605515272896 1393.7589149037901 82.493 3 0.29187361880252427 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 119017 12642 VEFTRSLFVN True NCI_RA007_Epitope_Rep5 1210.6346227381798 1210.63352993586 55.281 2 0.29185340494869577 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 53869 19749 KYIDFDHVF True PC9_epitope_Rep1 1182.57095985246 1182.5693249037902 80.791 3 0.29183636115036077 0.00036105427849320016 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 85489 20957 QLIDKVWQL True PC9_epitope_Rep1 1141.64954452633 1141.64844993586 85.434 2 0.2917743775313607 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 68790 14683 LVDPWTPHLY True H1975_Epitope_Rep1 1239.62880908175 1239.6277099358601 61.693 2 0.2917008711374617 0.00036105427849320016 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 83480 12591 QDGQFSVLFTK True H1975_Epitope_Rep1 1268.6401020414398 1268.63900993586 53.48 2 0.291699933508274 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 83481 13167 QDGQFSVLFTK True H1975_Epitope_Rep1 1268.6401020414398 1268.63900993586 55.742 2 0.2916751042590522 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 140623 20692 YYNPHLLLNTL True PC9_epitope_Rep5 1359.7186867153098 1359.7175899358601 84.647 2 0.29167024522045637 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 65426 4864 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 23.797 2 0.2916637725552256 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 18294 9117 EITALAPSTMK True NCI_RA007_Epitope_Rep2 1160.61111041228 1160.61000993586 40.069 2 0.2915776954977611 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 90063 12454 RGLDDIKDLKV True PC9_epitope_Rep6 1270.7245003717399 1270.72285490379 59.331 3 0.2915297391231715 0.00036105427849320016 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF'] 87431 5018 QTEERVQPEY True H1975_Epitope_Rep2 1277.58879474457 1277.58768993586 24.385 2 0.2915212532951243 0.00036105427849320016 0.9438714419765777 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 52829 20142 KQVEEIFNLKF True PC9_epitope_Rep3 1393.7605515272896 1393.7589149037901 82.73 3 0.2914995521993981 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 137210 9635 YLEETSIRY True H1975_Epitope_Rep2 1172.57135377528 1172.5702499358601 42.039 2 0.2914732726040504 0.00036105427849320016 0.9438714419765777 ['ENSG00000158796|ENST00000368006|DEDD', 'nc|ENSG00000158796|O75618-2|DEDD'] 103910 14089 SRMDGEGQLTL True PC9_epitope_Rep5 1205.5710365054497 1205.56992993586 59.204 2 0.29141037148062016 0.00036105427849320016 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 105590 9771 SVEEISTLVQK True NCI_RA007_Epitope_Rep4 1231.6659824361097 1231.6648899358602 44.433 2 0.29137140590052074 0.00036105427849320016 0.9438714419765777 ['ENSG00000055950|ENST00000318364|MRPL43', 'nc|ENSG00000055950|Q8N983-3|MRPL43', 'nc|ENSG00000055950|Q8N983-2|MRPL43', 'nc|ENSG00000055950|Q8N983|MRPL43', 'nc|ENSG00000055950|Q8N983-6|MRPL43', 'nc|ENSG00000055950|Q8N983-7|MRPL43'] 72805 17161 NAIDRLVNI True PC9_epitope_Rep6 1026.5821932425 1026.58108993586 78.594 2 0.2913027854723075 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 104460 8577 SSLNLRETNLD True NCI_RA007_Epitope_Rep4 1260.63099390972 1260.62988993586 39.776 2 0.2912353080977043 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 73914 15689 NHIEPLKIQL True PC9_epitope_Rep2 1203.6975573479099 1203.69646993586 65.623 2 0.2911771904548922 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 135775 6515 YENEVALRQ True NCI_RA007_Epitope_Rep1 1120.5512870370399 1120.55018993586 29.357 2 0.29117339951773935 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 87455 4591 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 22.764 2 0.29116173999070316 0.00036105427849320016 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 2324 7648 AEQDELSQRLA True H1975_Epitope_Rep2 1258.61534384558 1258.61424993586 34.372 2 0.29112497666063886 0.00036105427849320016 0.9438714419765777 ['ENSG00000255112|ENST00000526991|CHMP1B'] 104936 13299 STGIYEALELR True NCI_RA007_Epitope_Rep2 1250.65066672514 1250.6495699358602 56.367 2 0.2911124515137613 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 113050 16327 TPVLFDIYEIK True H1975_Epitope_Rep3 1336.72785441668 1336.7267499358602 68.276 2 0.29105691851315907 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 135788 6625 YENEVALRQ True PC9_epitope_Rep6 1120.5512870370399 1120.55018993586 34.199 2 0.2909346605528386 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 107167 16680 SYNNFFRMF True NCI_RA007_Epitope_Rep5 1224.53861417836 1224.53750993586 70.926 2 0.290925273797155 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 137163 11415 YLDPVQRDLY True H1975_Epitope_Rep2 1280.64010204144 1280.63900993586 48.958 2 0.2908415409570793 0.00036105427849320016 0.9438714419765777 ['ENST00000467680.5_1_7:99159903-99161679:+|nuORF', 'nc|ENSG00000197343|Q8N720-2|ZNF655'] 18303 12759 EITALAPSTMK True PC9_epitope_Rep5 1160.61111041228 1160.61000993586 54.084 2 0.2908119586427674 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 11066 10269 DDSNLYINVK True NCI_RA007_Epitope_Rep1 1179.57716743171 1179.57606993586 43.954 2 0.2907022084590268 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 28010 12515 FQYDHEAFL True H1975_Epitope_Rep2 1168.5189242795998 1168.5178299358602 53.232 2 0.29070215095833835 0.00036105427849320016 0.9438714419765777 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF', 'ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF'] 54157 19416 KYNDTFWKEF True PC9_epitope_Rep5 1376.6401020414398 1376.63900993586 79.732 2 0.29067792966546796 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 94648 19647 RYLDWIKKI True PC9_epitope_Rep1 1233.7233781729299 1233.7217249037901 80.397 3 0.2905993978318702 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 114375 9232 TSDHFETIMKY True H1975_Epitope_Rep1 1370.6176523446998 1370.61601490379 40.42 3 0.29048709283785756 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 32141 15074 GFAFVTFDDHD True NCI_RA007_Epitope_Rep5 1269.5302172392899 1269.52912993586 64.651 2 0.29040545155005515 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 27561 7043 FPLTTESAM[Oxidation]K True NCI_RA007_Epitope_Rep5 1139.55326156343 1139.55216993586 33.769 2 0.29037478780625475 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 38732 6015 HHTFYNELR True NCI_RA007_Epitope_Rep2 1215.57850484439 1215.57685490379 28.006 3 0.2903327116506263 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 67606 11754 LTEVDNYHFY True H1975_Epitope_Rep3 1299.5771674317102 1299.57606993586 50.355 2 0.2902148618397512 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 47407 11941 IYIKHPHLF True PC9_epitope_Rep4 1166.66004964038 1166.6589499358602 53.72 2 0.2901847593376446 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 25318 13490 FEELNM[Oxidation]DLFR True NCI_RA007_Epitope_Rep1 1328.6070880414397 1328.6059899358602 56.477 2 0.2901569856310809 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 132680 10418 VYRQDCETF True PC9_epitope_Rep1 1159.4968089360298 1159.49570993586 44.958 2 0.2901271597721468 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1', 'PPHLN1|p.E302K|2|0.37|ENSG00000134283|chr12:42398989-42398989|G/A|missense_variant'] 35608 11673 GTLDYILQR True NCI_RA007_Epitope_Rep3 1077.5818588893299 1077.5807699358602 53.034 2 0.29012703552121033 0.00036105427849320016 0.9438714419765777 ['ENSG00000140718|ENST00000471389|FTO'] 94786 21800 RYLPTGSFPFL True PC9_epitope_Rep5 1296.6866583110398 1296.68556993586 88.885 2 0.2899922855295278 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 2349 7816 AEQEPQPERLV True H1975_Epitope_Rep2 1294.6517293542997 1294.65062993586 35.011 2 0.28998572531655814 0.00036105427849320016 0.9438714419765777 ['ENSG00000124217|ENST00000244051|MOCS3'] 25066 12625 FDEFGIIR True H1975_Epitope_Rep1 995.5076313199098 995.50652993586 53.612 2 0.28998352595581967 0.00036105427849320016 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 39365 8180 HLVDEPQNLIK True NCI_RA007_Epitope_Rep5 1304.7088503076 1304.7072149037901 38.145 3 0.28995683146616863 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 124276 10522 VLDEADLSRY True H1975_Epitope_Rep2 1179.57716743171 1179.57606993586 45.493 2 0.2899320036205599 0.00036105427849320016 0.9438714419765777 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1'] 43356 19204 IHLIDPNTL True PC9_epitope_Rep1 1034.5760452329 1034.57494993586 78.663 2 0.2899260401052843 0.00036105427849320016 0.9438714419765777 ['ENSG00000169251|ENST00000351193|NMD3', 'NMD3|p.E344Kfs*10|1|0.18|ENSG00000169251|chr3:161246345-161246345|G/-|frameshift_variant', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 135094 9606 YALYDATYETK True H1975_Epitope_Rep1 1336.61869789052 1336.6176099358602 41.876 2 0.28990662948110474 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 117063 19246 TYQRWQFTL True PC9_epitope_Rep4 1241.61930702721 1241.61820993586 82.132 2 0.2898547819421875 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 74898 9187 NLQYYDISAK True H1975_Epitope_Rep3 1213.5979028762902 1213.5968099358602 40.328 2 0.2896823992686923 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 139297 19043 YTDLLRLFEY True H1975_Epitope_Rep2 1331.67615319699 1331.6750499358602 79.054 2 0.2896108610908072 0.00036105427849320016 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB'] 53577 5428 KVTEGSFVYK True NCI_RA007_Epitope_Rep5 1156.61282466444 1156.61172993586 27.566 2 0.2895930291723677 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 131257 8191 VVQELQQAISK True H1975_Epitope_Rep1 1241.6979512707296 1241.6968499358602 36.447 2 0.2895644020363198 0.00036105427849320016 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF'] 15597 8035 EATTEFSVDAR True NCI_RA007_Epitope_Rep1 1224.56224564356 1224.5611499358602 35.252 2 0.28953279222589323 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 136411 11950 YHFEEVQKL True PC9_epitope_Rep2 1191.5924235730297 1191.5907749037901 51.288 3 0.28952678334800597 0.00036105427849320016 0.9438714419765777 ['ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant'] 17510 8240 EHINEGETAM[Oxidation]L True PC9_epitope_Rep4 1258.5499670881397 1258.54886993586 39.156 2 0.28951818823768594 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 140434 17750 YYFEGIKQTF True PC9_epitope_Rep6 1294.6233893481397 1294.6222899358602 80.91 2 0.2894792084001571 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 27338 8246 FMEKETPLRY True H1975_Epitope_Rep2 1312.6485585501598 1312.64746993586 36.671 2 0.28947574653978475 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1'] 108315 12559 TEDGDSFLHLA True H1975_Epitope_Rep3 1203.54078192299 1203.53968993586 53.508 2 0.2894643451030744 0.00036105427849320016 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'NFKBIA|p.L131Wfs*33|1|0.1|ENSG00000100906|chr14:35403306-35403306|G/-|frameshift_variant', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 53606 6764 KVVNPLFEK True NCI_RA007_Epitope_Rep5 1072.6280808057597 1072.6269899358601 32.693 2 0.28929419817447155 0.00036105427849320016 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 108375 8565 TEDQFIRTP True H1975_Epitope_Rep2 1105.54038800017 1105.53928993586 37.898 2 0.28926422148117986 0.00036105427849320016 0.9438714419765777 ['ENSG00000062822|ENST00000440232|POLD1'] 61125 13588 LLDEAQRLLY True H1975_Epitope_Rep1 1232.67648755016 1232.67538993586 57.395 2 0.28926195752964107 0.00036105427849320016 0.9438714419765777 ['ENSG00000083817|ENST00000196489|ZNF416', 'ENSG00000197128|ENST00000356584|ZNF772', 'ENSG00000171649|ENST00000597850|ZIK1', 'nc|ENSG00000197128|Q68DY9|ZNF772', 'ENSG00000180884|ENST00000404801|ZNF792'] 139811 19874 YVDDTQFVRF True PC9_epitope_Rep1 1288.60880191316 1288.6077099358602 81.263 2 0.28924833880237205 0.00036105427849320016 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 13769 6047 DQNTVETLQR True NCI_RA007_Epitope_Rep2 1202.58912909774 1202.58802993586 28.126 2 0.28920813466237094 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 125805 6485 VNLPINGNGKQ True NCI_RA007_Epitope_Rep3 1152.62512068364 1152.62402993586 32.54 2 0.28915526446986406 0.00036105427849320016 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 53594 6464 KVVEGSFVYK True NCI_RA007_Epitope_Rep4 1154.6335601090198 1154.63191490379 31.462 3 0.28908655557137264 0.00036105427849320016 0.9438714419765777 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 139277 4982 YTDHQNSSSYY True H1975_Epitope_Rep2 1363.5316737912701 1363.53056993586 24.246 2 0.2890732049699632 0.00036105427849320016 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 48590 5585 KEIEEYIHKP True H1975_Epitope_Rep1 1284.6714021697198 1284.66976490379 26.548 3 0.28906956817893487 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 132157 10538 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 45.474 3 0.2890399997893942 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 54615 12760 LADIYRELY True H1975_Epitope_Rep1 1154.5971746003 1154.5960699358602 54.142 2 0.2890129416038427 0.00036105427849320016 0.9438714419765777 ['ENSG00000162227|ENST00000294168|TAF6L'] 101804 13117 SPIENIQRVA True PC9_epitope_Rep3 1125.6142216467701 1125.6131299358601 55.476 2 0.2889734246697594 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 61336 8878 LLEELEEGQK True H1975_Epitope_Rep1 1186.60813320682 1186.60702993586 39.061 2 0.2889510003240356 0.00036105427849320016 0.9438714419765777 ['ENSG00000169139|ENST00000523111|UBE2V2', 'UBE2V2|p.R14L|1|0.27|ENSG00000169139|chr8:48043057-48043057|G/T|missense_variant', 'ENST00000470565.5_1_20:48713044-48729665:-|nuORF', 'ENST00000490289.5_1_20:48711880-48729665:-|nuORF', 'nc|ENSG00000244687|Q13404-8|UBE2V1', 'nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF'] 13914 4954 DREEALHQFR True NCI_RA007_Epitope_Rep4 1299.6319969692297 1299.63034490379 25.521 3 0.2889072470445068 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 22317 11998 ETEEGIYWRY True H1975_Epitope_Rep1 1344.5986311522797 1344.5975299358602 51.158 2 0.28885508204460314 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131650|Q8NCW0-6|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-4|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-3|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-5|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-2|KREMEN2', 'ENSG00000131650|ENST00000303746|KREMEN2'] 97363 13187 [Acetylation]-SGALDVLQM[Oxidation]K True H1975_Epitope_Rep1 1118.5641609165998 1118.56306993586 55.82 2 0.2888314506556358 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF', 'ENST00000489520.2_1_12:66152652-66152778:-|nuORF'] 139439 13158 YTEPNYWIRY True H1975_Epitope_Rep2 1403.65100107831 1403.64990993586 55.736 2 0.2888150078171753 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion'] 53245 4323 KTFEGNLTTK True NCI_RA007_Epitope_Rep4 1137.6029882567298 1137.60188993586 22.971 2 0.28877608532173826 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 54116 11336 KYMEDYHQF True PC9_epitope_Rep5 1259.52810906431 1259.5264649037902 48.6 3 0.2887103863252582 0.00036105427849320016 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 96852 4052 SESPKEPEQLR True NCI_RA007_Epitope_Rep2 1298.64664397386 1298.6449949037901 20.4 3 0.28866447953824903 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 125231 7872 VLQSFTVDSSK True H1975_Epitope_Rep1 1209.62411762413 1209.6230299358601 35.23 2 0.2886482273102154 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 53874 19661 KYIDFDHVF True PC9_epitope_Rep5 1182.57095985246 1182.5693249037902 80.683 3 0.28860441042657864 0.00036105427849320016 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 32217 14352 GFGFVTFDDHD True NCI_RA007_Epitope_Rep3 1255.51456717515 1255.51346993586 63.765 2 0.2885902343862256 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 114904 6058 TTESQELSRY True H1975_Epitope_Rep2 1212.56224564356 1212.5611499358602 28.279 2 0.288536183345109 0.00036105427849320016 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3'] 12446 17897 DKLNNLVLFDK True PC9_epitope_Rep5 1317.7292513990099 1317.72760490379 73.859 3 0.28845140259710916 0.00036105427849320016 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 53431 13372 KVIDDTNITRL True PC9_epitope_Rep3 1286.7194149913 1286.71777490379 56.468 3 0.28843598656159225 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 132144 10170 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5287299358602 43.995 2 0.2884109216165728 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 24053 19828 EYQELMNVKL True PC9_epitope_Rep5 1265.6325741328499 1265.6314699358602 81.314 2 0.28834725599900785 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 72425 5950 MTESYEQEKY True H1975_Epitope_Rep3 1306.5387333176598 1306.5376299358602 27.898 2 0.2883277312697954 0.00036105427849320016 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 21849 10385 ESEDPDYYQY True H1975_Epitope_Rep2 1307.48299226335 1307.4818899358602 44.957 2 0.2883023866221535 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 132152 9127 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5287299358602 40.445 2 0.2882913505836423 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 57279 6475 LEGFHTQISK True NCI_RA007_Epitope_Rep1 1158.6033226099 1158.60166490379 29.206 3 0.2881914595174053 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1', 'ENST00000560420.1_1_14:24606925-24607473:+|nuORF'] 20903 6591 EQSVQEIPVSR True H1975_Epitope_Rep1 1270.6517293542997 1270.65062993586 30.413 2 0.28816756578943986 0.00036105427849320016 0.9438714419765777 ['CON__P06868'] 65282 9744 LSEINKPNFY True H1975_Epitope_Rep3 1223.61863832087 1223.61754993586 42.503 2 0.2881408343478862 0.00036105427849320016 0.9438714419765777 ['ENSG00000067334|ENST00000436063|DNTTIP2', 'DNTTIP2|p.N616Tfs*33|1|0.3|ENSG00000067334|chr1:93873174-93873174|T/-|frameshift_variant'] 139440 12908 YTEPNYWIRY True H1975_Epitope_Rep3 1403.65100107831 1403.64990993586 54.878 2 0.28809588922785234 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion'] 26307 11934 FIDVDDERWHY True H1975_Epitope_Rep2 1493.65754301073 1493.6558849037901 50.982 3 0.2880825462585634 0.00036105427849320016 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 45576 14117 ISGLIYEETR True PC9_epitope_Rep5 1179.6135529404298 1179.61244993586 59.312 2 0.28807931243806795 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 49011 6985 KFIDTTSKF True NCI_RA007_Epitope_Rep3 1085.57571087973 1085.57460993586 34.584 2 0.2880019865944839 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 4773 11830 ALEEQLQQIR True PC9_epitope_Rep6 1226.6619001151798 1226.66080993586 56.71 2 0.2879618463923888 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 66062 12172 LSNIFVIGK True NCI_RA007_Epitope_Rep5 989.5909670210499 989.58986993586 53.474 2 0.2879351314331773 0.00036105427849320016 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 80912 10020 PM[Oxidation]FIVNTNVPR True H1975_Epitope_Rep1 1302.6754423847801 1302.6743499358602 43.478 2 0.28791819235270333 0.00036105427849320016 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 12299 7318 DISTNYYASQK True NCI_RA007_Epitope_Rep2 1288.59354577184 1288.59244993586 33.087 2 0.2879060874520998 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1'] 108719 4209 TEM[Oxidation]NGRIVAT True H1975_Epitope_Rep2 1106.5390084816197 1106.5379099358602 21.297 2 0.28790338358744966 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 94117 20511 RWFDKSFTF True PC9_epitope_Rep1 1232.59784330664 1232.59674993586 83.706 2 0.2878162045601181 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 28954 6100 FTERSKLIDHY True H1975_Epitope_Rep3 1407.71466396403 1407.71302490379 28.476 3 0.2877845228122456 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'nc|ENSG00000181220|Q6NUN9-3|ZNF746'] 121716 8595 VGLQVVAVK True H1975_Epitope_Rep3 911.5804023373498 911.57930993586 38.052 2 0.28775220321355943 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 22580 9308 ETNLFETEETR True NCI_RA007_Epitope_Rep2 1367.6204887956699 1367.61938993586 40.813 2 0.2877489256732311 0.00036105427849320016 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 7901 6981 ATATANQIILK True NCI_RA007_Epitope_Rep3 1142.66592286646 1142.66482993586 34.568 2 0.28768908217907796 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 88014 7630 QVSPEAGVQKV True PC9_epitope_Rep3 1140.6138872935999 1140.61278993586 34.345 2 0.2876691652120037 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 138819 8194 YSDKYFDEHY True H1975_Epitope_Rep2 1365.55134660669 1365.54970490379 36.471 3 0.28764556736727154 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 933 13278 [Acetylation]-ADSELQLVEQR True H1975_Epitope_Rep3 1328.65720897386 1328.65610993586 56.33 2 0.28751433940170557 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198931|P07741-2|APRT', 'ENST00000564858.1_1_16:88877682-88878307:-|nuORF', 'ENSG00000198931|ENST00000378364|APRT'] 102018 5234 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 24.442 2 0.2874116838793014 0.00036105427849320016 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 96746 9038 SEQLDLPVRQA True H1975_Epitope_Rep1 1254.65681473474 1254.6557099358602 39.671 2 0.2873824575905388 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF'] 53582 2624 KVVDSLYNK True NCI_RA007_Epitope_Rep3 1064.5866099165999 1064.58550993586 14.782 2 0.2873656506627412 0.00036105427849320016 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 72423 5878 MTESYEQEKY True H1975_Epitope_Rep2 1306.5387333176598 1306.5376299358602 27.595 2 0.28725836871572336 0.00036105427849320016 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 14354 5754 DTDYRSM[Oxidation]EY True H1975_Epitope_Rep2 1194.4499186936998 1194.4488299358602 27.13 2 0.28716956807095767 0.00036105427849320016 0.9438714419765777 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 88263 20601 QYFDSRGMFI True PC9_epitope_Rep3 1262.5753936098997 1262.5742899358602 84.51 2 0.2870860510154075 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18', 'ENST00000497508.1_1_2:669582-669891:-|nuORF'] 94658 5627 RYLEKNVKL True NCI_RA007_Epitope_Rep4 1161.6869926642098 1161.6853349037901 28.246 3 0.28706233434387884 0.00036105427849320016 0.9438714419765777 ['ENST00000523948.5_1_8:56686169-56737149:+|nuORF', 'ENSG00000137574|ENST00000260129|TGS1'] 10056 8433 AYVHMVTHF True NCI_RA007_Epitope_Rep3 1103.52223583823 1103.52112993586 40.257 2 0.2870592873170616 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 107122 10972 SYMLVNENRF True NCI_RA007_Epitope_Rep3 1271.5968573304701 1271.59576993586 50.247 2 0.28701903081677077 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 61329 14740 LLEEEIIAFSK True H1975_Epitope_Rep1 1290.7071189720998 1290.7060299358602 61.918 2 0.2869989451992954 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'ENST00000517342.1_1_8:57389388-57389772:-|nuORF'] 13803 7275 DQVANSAFVER True H1975_Epitope_Rep3 1234.59421447818 1234.5931099358602 32.958 2 0.286901613777192 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 107046 19835 SYLPISPTF True PC9_epitope_Rep6 1023.52769805815 1023.5266099358599 88.957 2 0.28689300869688056 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 2532 4627 AEQVQPPRSP True H1975_Epitope_Rep2 1107.5672714543498 1107.5661699358602 22.898 2 0.28688771984226275 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5', 'ENST00000454841.5_1_2:113343759-113346463:+|nuORF', 'ENSG00000125611|ENST00000324913|CHCHD5'] 39050 3455 HKSETDTSLIR True NCI_RA007_Epitope_Rep4 1285.66262839117 1285.66099490379 19.218 3 0.2868712645559377 0.00036105427849320016 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 88402 21731 QYPVYWDHLEF True PC9_epitope_Rep1 1495.67721582615 1495.67610993586 88.419 2 0.2868598438434423 0.00036105427849320016 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21'] 104812 12906 STDVSDLLHQY True H1975_Epitope_Rep1 1276.5935457718401 1276.59244993586 54.717 2 0.2868006574510322 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 66063 18677 LSNIFVIGK True PC9_epitope_Rep1 989.5909670210499 989.58986993586 76.631 2 0.28675230359176945 0.00036105427849320016 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 87366 12729 QTDIQGALSAY True H1975_Epitope_Rep2 1165.5615173675699 1165.5604299358602 54.065 2 0.2867257438205575 0.00036105427849320016 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 139664 11568 YTSYPMHDFY True H1975_Epitope_Rep1 1322.52777471114 1322.5266699358601 49.482 2 0.28672223616743897 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 37242 6565 GVVEVTHDLQK True NCI_RA007_Epitope_Rep1 1223.6510010783097 1223.64990993586 29.551 2 0.2867095199014671 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 138947 6282 YSEGYPGQRY True H1975_Epitope_Rep3 1218.53055159246 1218.5294499358602 29.17 2 0.286708766850555 0.00036105427849320016 0.9438714419765777 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 73920 17119 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69646993586 71.001 2 0.28666554903150215 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 117095 16249 TYRNVMEQF True PC9_epitope_Rep5 1186.54409348162 1186.54298993586 67.491 2 0.28664272491371967 0.00036105427849320016 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 39368 11919 HLVDEPQNLIK True PC9_epitope_Rep2 1304.7088503076 1304.7072149037901 51.17 3 0.28663267159084377 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 138919 10435 YSEDRIGLADY True H1975_Epitope_Rep1 1300.59354577184 1300.59244993586 45.092 2 0.2866198683488835 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 91627 10343 RPFEDQTSL True PC9_epitope_Rep4 1091.52473793603 1091.52364993586 47.478 2 0.28650475604784875 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 133119 14204 WAYPRQVFI True H1975_Epitope_Rep2 1178.6236641316598 1178.6225699358602 59.786 2 0.2864936561798989 0.00036105427849320016 0.9438714419765777 ['ENST00000505222.5_1_6:82901346-82950269:-|nuORF', 'nc|ENSG00000005700|Q9P2D0-2|IBTK', 'ENST00000369751.2_1_6:82901346-82950269:-|nuORF', 'ENSG00000005700|ENST00000306270|IBTK'] 73925 14911 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69592490379 65.297 3 0.2864905539164888 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 60786 4287 LKGDDLQAIKK True NCI_RA007_Epitope_Rep4 1227.7186867153098 1227.71704490379 22.824 3 0.28646576543515945 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 97121 11545 SFELFADKVPK True NCI_RA007_Epitope_Rep1 1279.68123857743 1279.67959490379 48.876 3 0.28646464564797897 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA'] 71974 15038 MPWGDPNYRSA True PC9_epitope_Rep5 1292.5608061749201 1292.5597099358602 62.848 2 0.28645697881415183 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 139345 4075 YTDSSYEEKKY True H1975_Epitope_Rep3 1411.61434078607 1411.61269490379 20.8 3 0.28645029632830515 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 53989 8095 KYLDNPNAL True NCI_RA007_Epitope_Rep4 1046.53965972418 1046.53856993586 37.924 2 0.28635393727716335 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 120229 21250 VFNDVRLLL True PC9_epitope_Rep5 1087.6389798426299 1087.6378899358601 86.788 2 0.2863300174630169 0.00036105427849320016 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 52153 14194 KLVILEGELER True PC9_epitope_Rep4 1297.7605515272899 1297.7589149037901 62.503 3 0.2862935086168132 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 36008 12315 GVDDAANFRTV True PC9_epitope_Rep2 1163.5571006934701 1163.5560099358602 52.682 2 0.28629161928839925 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 87053 14190 QSDPWQQELY True H1975_Epitope_Rep2 1292.5673310240002 1292.56622993586 59.733 2 0.2862830116229014 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 88867 5153 REAEHLYHTL True H1975_Epitope_Rep2 1267.6309343400699 1267.62928490379 24.898 3 0.286279454822414 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 116520 18301 TYDYNFHSF True PC9_epitope_Rep5 1192.48253877088 1192.4814499358602 75.409 2 0.2862773750608165 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 15163 6855 EAESSPFVER True NCI_RA007_Epitope_Rep2 1149.5302172392899 1149.52912993586 31.28 2 0.28625909410173045 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 53754 12973 KYFDEHYEY True PC9_epitope_Rep3 1292.53496826656 1292.53333490379 54.929 3 0.2862040368395798 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 22312 15750 ETEEDKFLLLY True H1975_Epitope_Rep3 1398.6918628307799 1398.69076993586 66.025 2 0.2861982991958776 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 77308 14829 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.6069699358602 61.859 2 0.2861627149406919 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 26917 15536 FLGSFLYEYSR True H1975_Epitope_Rep1 1380.6714021697198 1380.6703099358601 65.033 2 0.2861182128559479 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 26716 11717 FLDGIYVSEK True H1975_Epitope_Rep1 1169.59684024713 1169.59574993586 50.061 2 0.2860863151919137 0.00036105427849320016 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 132358 15393 VYMDWYEKF True NCI_RA007_Epitope_Rep5 1279.5583465634297 1279.55724993586 65.91 2 0.2860493901668843 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 95019 14924 RYQQWMERF True PC9_epitope_Rep2 1342.6240751378198 1342.62241490379 62.667 3 0.2860459405424015 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 45450 6067 ISEEDELDTK True NCI_RA007_Epitope_Rep2 1177.53502783621 1177.5339299358602 28.205 2 0.2860425476723266 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 20698 8716 EQISDIDDAVR True H1975_Epitope_Rep3 1259.59935942827 1259.5982699358601 38.527 2 0.286042546159825 0.00036105427849320016 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 61136 7467 LLDEHHISY True H1975_Epitope_Rep3 1125.54547338061 1125.54436993586 33.7 2 0.28604091044439345 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 3190 6609 AGELTEDEVER True NCI_RA007_Epitope_Rep1 1246.5677249468197 1246.5666299358602 29.721 2 0.2860219902252283 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 48875 7154 KESYSVYVYK True NCI_RA007_Epitope_Rep2 1264.6339540318397 1264.6328499358601 32.45 2 0.28599239878850113 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 135624 7088 YEEQHPELTP True H1975_Epitope_Rep2 1241.5564319871298 1241.55532993586 32.195 2 0.2859724045882389 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 124272 7172 VLDEADEM[Oxidation]LSR True H1975_Epitope_Rep3 1292.59183190012 1292.59072993586 32.561 2 0.2859621672462339 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 127401 16711 VQQTVQDLFGR True PC9_epitope_Rep5 1289.67279915205 1289.67170993586 69.285 2 0.2858926699849909 0.00036105427849320016 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 86755 19219 QRLINLVGESL True PC9_epitope_Rep4 1240.7139356880398 1240.71282993586 82.027 2 0.28585333602173146 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 70268 14570 LYNPKITSEL True PC9_epitope_Rep4 1176.63903941228 1176.6379499358602 63.961 2 0.28584842422296786 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 97122 11554 SFELFADKVPK True NCI_RA007_Epitope_Rep1 1279.68123857743 1279.68014993586 48.911 2 0.2858247470897141 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA'] 77057 6003 NVYYNEATGGK True NCI_RA007_Epitope_Rep2 1214.5567663402996 1214.5556699358601 27.96 2 0.28569212132190663 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF'] 124455 6955 VLETAEDIQER True NCI_RA007_Epitope_Rep5 1301.6463096206896 1301.64520993586 33.437 2 0.28566522409074435 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 138911 7517 YSEDLSDM[Oxidation]HY True H1975_Epitope_Rep1 1274.47613344154 1274.4750299358602 33.912 2 0.2856515222572501 0.00036105427849320016 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 113664 16364 TRDELEWKL True PC9_epitope_Rep3 1188.6138872935999 1188.61225490379 68.079 3 0.2856503261381942 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 48427 13141 KEEDVLKFLAA True H1975_Epitope_Rep2 1261.69180326113 1261.69070993586 55.67 2 0.2856363890020761 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 17901 15521 EIDMNDIKAFY True H1975_Epitope_Rep2 1357.62240337197 1357.6213099358602 64.856 2 0.2855884664212927 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 25312 13589 FEELNADLFR True H1975_Epitope_Rep1 1252.6088019131598 1252.6077099358602 57.398 2 0.28558406484945204 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 11561 13469 DGQFSVLFTK True H1975_Epitope_Rep1 1140.5815245361598 1140.5804299358601 56.925 2 0.2855536995012874 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 116024 20806 TVRELFEEL True PC9_epitope_Rep5 1134.5920892198599 1134.59098993586 85.079 2 0.2855049446734851 0.00036105427849320016 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 27333 6608 FM[Oxidation]EKETPLRY True H1975_Epitope_Rep1 1328.6434735501598 1328.6418149037902 30.474 3 0.28550324741971234 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1'] 72844 15986 NALRELETV True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 66.481 2 0.28550187675495825 0.00036105427849320016 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000489129.5_1_15:63032816-63046163:+|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 61419 4132 LLEQYKEESKK True NCI_RA007_Epitope_Rep2 1393.7452953859695 1393.74364490379 20.71 3 0.28549811737868663 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 41849 11794 IDTIEIITDR True NCI_RA007_Epitope_Rep3 1187.63976768827 1187.6386699358602 53.508 2 0.2854487807557926 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 110711 4881 TKDGVVEITGK True NCI_RA007_Epitope_Rep1 1145.62920300457 1145.6275649037902 23.066 3 0.2854383445827515 0.00036105427849320016 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 28449 6830 FSENEKNAAYY True H1975_Epitope_Rep2 1334.5778957077 1334.57678993586 31.191 2 0.2854346622788645 0.00036105427849320016 0.9438714419765777 ['ENSG00000081019|ENST00000261441|RSBN1', 'nc|ENSG00000081019|Q5VWQ0-4|RSBN1'] 3796 12508 AGVLAHLEEER True PC9_epitope_Rep1 1222.6305999868998 1222.6289549037901 52.98 3 0.2854294526508461 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 7110 5016 AQYEDIAQKS True NCI_RA007_Epitope_Rep3 1151.5458673034298 1151.5447699358601 26.726 2 0.2854206109725338 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 12142 11570 DIISDTSGDFR True NCI_RA007_Epitope_Rep2 1224.5622456435601 1224.5611499358602 49.595 2 0.2853883212874797 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 137060 9288 YLAEFATGNDR True NCI_RA007_Epitope_Rep2 1255.5833154413099 1255.5822099358602 40.738 2 0.28536559395052574 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000453697.1_1_7:63894611-63894797:+|nuORF'] 49022 9923 KFIDTTSKF True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 43.501 2 0.2853148730540527 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 42377 10194 IENGHIFTV True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 44.215 2 0.2853132924299251 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'SPAG16-CUL3|1|fusion'] 91626 12035 RPFEDQTSL True PC9_epitope_Rep3 1091.52473793603 1091.52364993586 51.327 2 0.2852921597265615 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 22824 9745 EVEDVVM[Oxidation]VNVR True NCI_RA007_Epitope_Rep1 1303.64420182615 1303.6431099358601 41.907 2 0.28524192189015235 0.00036105427849320016 0.9438714419765777 ['ENSG00000134001|ENST00000256383|EIF2S1', 'ENST00000556724.1_1_14:67827147-67841270:+|nuORF'] 12086 14515 DIFEAQIAGLR True H1975_Epitope_Rep3 1231.6560864587498 1231.6549899358602 61.194 2 0.285231381862247 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 131259 8830 VVQELQQAISK True NCI_RA007_Epitope_Rep1 1241.6979512707296 1241.6968499358602 38.348 2 0.28520365809717524 0.00036105427849320016 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF'] 127127 20545 VQDELHSVLGL True PC9_epitope_Rep5 1208.64010204144 1208.63900993586 84.07 2 0.2851839017966239 0.00036105427849320016 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 15296 7286 EAIEGTYIDK True NCI_RA007_Epitope_Rep5 1137.5553693579698 1137.55426993586 34.702 2 0.28517669596885836 0.00036105427849320016 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF'] 128452 10562 VSEQELLRY True H1975_Epitope_Rep2 1135.5873381925899 1135.58624993586 45.648 2 0.2851387696031085 0.00036105427849320016 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 24765 19564 FAYDGKDYLTL True PC9_epitope_Rep4 1304.6288686513997 1304.6277699358602 83.376 2 0.2850885115733986 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 132650 16356 VYQLRFQFL True NCI_RA007_Epitope_Rep4 1212.6655289436396 1212.6644299358602 70.914 2 0.28508785031133327 0.00036105427849320016 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 86752 20533 QRLINLVGESL True PC9_epitope_Rep1 1240.7139356880398 1240.71282993586 83.792 2 0.2850652533468036 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 37531 21103 GYLPNQLFRTF True PC9_epitope_Rep2 1354.70337100434 1354.7022699358602 86.631 2 0.28503667563793184 0.00036105427849320016 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 24762 20588 FAYDGKDYLTL True PC9_epitope_Rep1 1304.6288686513997 1304.6277699358602 84.006 2 0.28500763427710973 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 11061 6327 DDREDLVYQAK True H1975_Epitope_Rep1 1350.6415585934199 1350.6399149037902 29.402 3 0.28499362393792516 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENST00000498643.1_1_17:1302531-1303404:-|nuORF', 'ENST00000576854.1_1_17:1303083-1303470:-|nuORF'] 140699 7558 YYQDTPKQI True PC9_epitope_Rep6 1154.5607890915799 1154.5596899358602 38.345 2 0.28493592885354996 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 28373 11984 FSDNDKLYLY True H1975_Epitope_Rep3 1276.59756852312 1276.5964699358601 51.254 2 0.28493567998266117 0.00036105427849320016 0.9438714419765777 ['ENSG00000143390|ENST00000452671|RFX5', 'ENST00000479681.5_1_1:151317580-151318796:-|nuORF', 'nc|ENSG00000143390|P48382-2|RFX5'] 75947 20630 NRFNYPFEL True PC9_epitope_Rep5 1198.5771078620598 1198.5760099358602 84.404 2 0.284917091069024 0.00036105427849320016 0.9438714419765777 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 99401 11114 SLEDQVEM[Oxidation]LR True NCI_RA007_Epitope_Rep2 1234.58635259686 1234.58524993586 47.81 2 0.2849080653816563 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 137190 9244 YLDYDDTRY True H1975_Epitope_Rep1 1222.51423282198 1222.5131299358602 40.468 2 0.28486371347039374 0.00036105427849320016 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000535343.5_1_12:132632219-132636084:+|nuORF', 'NOC4L-STAB2|1|fusion'] 138985 8133 YSEYPPFSHRY True H1975_Epitope_Rep1 1444.6411646706 1444.63951490379 36.222 3 0.28485771747640654 0.00036105427849320016 0.9438714419765777 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 107170 20627 SYNNFFRMF True PC9_epitope_Rep4 1224.53861417836 1224.53750993586 87.498 2 0.28481139671463096 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 117635 11859 VAIEHLDKI True PC9_epitope_Rep5 1036.59169529704 1036.5905899358602 50.613 2 0.2847860417303027 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 114424 7470 TSDVDLDKY True H1975_Epitope_Rep3 1054.4818700645399 1054.48076993586 33.712 2 0.284782533827655 0.00036105427849320016 0.9438714419765777 ['ENST00000569380.5_1_16:1827941-1828049:-|nuORF', 'ENST00000564709.5_1_16:1827100-1828401:-|nuORF', 'ENSG00000162032|ENST00000566339|SPSB3'] 69474 7724 LVSESSDVLPK True H1975_Epitope_Rep3 1172.6288686514001 1172.6277699358602 34.693 2 0.28477037057854077 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 77108 12089 NYAQVLDKF True NCI_RA007_Epitope_Rep3 1096.5553097883198 1096.5542099358602 54.671 2 0.2847642347087189 0.00036105427849320016 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 4697 11973 ALDLEIATYR True H1975_Epitope_Rep3 1163.6186383208699 1163.61754993586 51.213 2 0.2847585267084447 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 7984 4681 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 23.102 2 0.2847000642557158 0.00036105427849320016 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 24201 14330 EYVEKFYRI True PC9_epitope_Rep2 1245.6393737654498 1245.63826993586 60.385 2 0.2846831561168298 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 108085 11481 TDLLLEPYNK True NCI_RA007_Epitope_Rep2 1204.6339540318397 1204.6328499358601 49.251 2 0.284682855582153 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 22825 9627 EVEDVVM[Oxidation]VNVR True NCI_RA007_Epitope_Rep2 1303.64420182615 1303.6431099358601 42.062 2 0.28467931466161617 0.00036105427849320016 0.9438714419765777 ['ENSG00000134001|ENST00000256383|EIF2S1', 'ENST00000556724.1_1_14:67827147-67841270:+|nuORF'] 20920 8602 EQVANSAFVER True PC9_epitope_Rep2 1248.6098645423197 1248.6087699358602 38.448 2 0.2846636477335659 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 89733 10137 REYQELMSV True NCI_RA007_Epitope_Rep5 1153.54375912845 1153.5426699358602 45.626 2 0.28465950064836615 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 2839 16562 [Acetylation]-AEVQVLVLDGR True H1975_Epitope_Rep3 1239.68230152289 1239.6812099358601 69.202 2 0.2846568077142383 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000479992.5_1_19:49990877-49993604:+|nuORF', 'ENST00000472481.5_1_19:49990877-49994169:+|nuORF'] 129264 13754 VTDPTGFLRM True H1975_Epitope_Rep2 1135.5695799534699 1135.56848993586 58.05 2 0.2846406208877867 0.00036105427849320016 0.9438714419765777 ['ENSG00000100154|ENST00000397906|TTC28'] 40869 6473 HVLVTLGEK True NCI_RA007_Epitope_Rep4 994.58113061334 994.58002993586 31.496 2 0.2846388516424351 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 93748 2969 RTSEIYVHR True NCI_RA007_Epitope_Rep2 1159.6098049726697 1159.60816490379 16.068 3 0.2846285534210204 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 71731 3801 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1273.50672275761 1273.50562993586 19.71 2 0.28455029206470583 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 65029 10402 LSDIVIEKY True H1975_Epitope_Rep2 1078.5910265907 1078.58992993586 45.025 2 0.28454123554371036 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'nc|ENSG00000184465|A2RRH5-3|WDR27', 'ENST00000546953.1_1_6:170072345-170089107:-|nuORF'] 64309 21603 LQMEPAAFQAL True PC9_epitope_Rep5 1217.61144476545 1217.61034993586 88.136 2 0.28449419203110665 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 53490 11607 KVLEDQQNIRL True PC9_epitope_Rep1 1354.75686312918 1354.75522490379 49.525 3 0.28448144602525444 0.00036105427849320016 0.9438714419765777 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32'] 54362 7619 KYQEYTNEL True NCI_RA007_Epitope_Rep4 1186.5506183307 1186.5495299358602 35.96 2 0.284471059642182 0.00036105427849320016 0.9438714419765777 ['ENSG00000183735|ENST00000331710|TBK1', 'ENST00000545392.1_1_12:64890804-64891535:+|nuORF'] 116534 21813 TYEKFFGLL True PC9_epitope_Rep1 1116.5855472874398 1116.5844499358602 88.714 2 0.2844375397020187 0.00036105427849320016 0.9438714419765777 ['ENSG00000163510|ENST00000410053|CWC22'] 26292 12549 FIDHDITSQLY True H1975_Epitope_Rep2 1350.6455813447 1350.64448993586 53.364 2 0.2844260256776329 0.00036105427849320016 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 28011 12354 FQYDHEAFL True H1975_Epitope_Rep3 1168.5189242795998 1168.5178299358602 52.705 2 0.28442523533706093 0.00036105427849320016 0.9438714419765777 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF', 'ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF'] 61143 16138 LLDEMQRLLY True H1975_Epitope_Rep2 1292.67985867844 1292.6787699358601 67.286 2 0.2844152134469637 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183647|Q6P9A1|ZNF530'] 118386 5975 VDKLDASESLR True NCI_RA007_Epitope_Rep1 1231.64083031743 1231.63918490379 27.287 3 0.28439459734123357 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 138920 10643 YSEDRIGLADY True H1975_Epitope_Rep2 1300.59354577184 1300.59244993586 45.962 2 0.2843920356182862 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 69187 5893 LVM[Oxidation]EEAPESYK True H1975_Epitope_Rep1 1310.6064193350996 1310.60532993586 27.737 2 0.2843882122370476 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 14810 16040 DYAYLREHF True PC9_epitope_Rep2 1212.5563724174797 1212.55526993586 66.954 2 0.2843842667522726 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 137198 8535 YLDYHMEKY True H1975_Epitope_Rep2 1260.5485101557201 1260.54685490379 37.785 3 0.2843630634920066 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 117094 16500 TYRNVMEQF True PC9_epitope_Rep3 1186.54409348162 1186.54298993586 68.604 2 0.284360332342324 0.00036105427849320016 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 20921 8698 EQVANSAFVER True PC9_epitope_Rep2 1248.6098645423197 1248.6087699358602 38.82 2 0.28434193484627435 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 94653 16513 RYLDWIKKI True PC9_epitope_Rep6 1233.7233781729299 1233.7217249037901 75.951 3 0.28426847293428453 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 108088 16962 TDLLLEPYNK True PC9_epitope_Rep3 1204.6339540318397 1204.6328499358601 70.406 2 0.284245224961997 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 52715 15634 KQLDDLKVEL True PC9_epitope_Rep3 1199.6761531969898 1199.6745149037902 65.282 3 0.2841858503348422 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 77639 10540 NYYEQWGK True PC9_epitope_Rep4 1086.47705946762 1086.4759699358601 48.271 2 0.28418158660824305 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 53451 9649 KVIDPATATSV True PC9_epitope_Rep4 1100.607739284 1100.60664993586 44.741 2 0.2841663072757084 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 74602 7555 NLDQATRVAY True H1975_Epitope_Rep1 1149.5778361380499 1149.5767299358602 34.052 2 0.28414745422899385 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 13677 17265 DQELYFFHEL True H1975_Epitope_Rep1 1339.6084675599898 1339.60736993586 71.871 2 0.28407381169503504 0.00036105427849320016 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 33975 18430 GNFNYIEFTR True PC9_epitope_Rep2 1259.5934862021898 1259.5923899358602 76.223 2 0.2840735533161712 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 61233 10598 LLDPTQKALY True H1975_Epitope_Rep2 1160.64412479272 1160.64302993586 45.788 2 0.2840598513632051 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A'] 53243 10761 KTFALPGIIK True NCI_RA007_Epitope_Rep4 1086.6801163786197 1086.6790099358602 48.238 2 0.2840193923555751 0.00036105427849320016 0.9438714419765777 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-2|FCHO2'] 45425 11400 ISDSVLVDIK True NCI_RA007_Epitope_Rep1 1087.6124903112698 1087.6113899358602 48.312 2 0.2839952042881466 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 106324 5558 SVSDEEM[Oxidation]M[Oxidation]ELR True H1975_Epitope_Rep3 1356.55373251968 1356.55262993586 26.424 2 0.283992779170188 0.00036105427849320016 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'ENST00000460190.1_1_13:46733728-46733797:-|nuORF', 'LCP1|p.L163Ffs*4|2|0.19|ENSG00000136167|chr13:46156442-46156442|G/-|frameshift_variant'] 53491 11810 KVLEDQQNIRL True PC9_epitope_Rep3 1354.75686312918 1354.75522490379 50.443 3 0.28398189567670734 0.00036105427849320016 0.9438714419765777 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32'] 112202 15016 TLVYHVVGV True PC9_epitope_Rep4 985.5596668927699 985.55856993586 65.696 2 0.28396835002947785 0.00036105427849320016 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 49468 22087 KIWEELSVLEV True PC9_epitope_Rep1 1343.73366807311 1343.73256993586 89.769 2 0.2839083667858384 0.00036105427849320016 0.9438714419765777 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|245|11.93|0.02|9.4|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3'] 73013 9532 NDEELNKLLGK True NCI_RA007_Epitope_Rep5 1271.6721304457099 1271.6710299358601 43.302 2 0.2838916834755034 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 97067 7509 SEYLRYEDT True H1975_Epitope_Rep3 1174.51423282198 1174.5131299358602 33.865 2 0.28384697035179496 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 76333 7691 NSELLNDRY True H1975_Epitope_Rep2 1122.53055159246 1122.5294499358602 34.535 2 0.28378712670065465 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14'] 69223 16154 LVNELTEFAK True PC9_epitope_Rep4 1162.6233893481399 1162.6222899358602 70.076 2 0.2837744069343917 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 72229 13317 MRYNEKELQAL True PC9_epitope_Rep1 1393.70238502817 1393.70074490379 56.085 3 0.2837695948834359 0.00036105427849320016 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 92159 12147 RQEDLIMKV True PC9_epitope_Rep1 1130.6117791186198 1130.61013490379 51.585 3 0.283762064160342 0.00036105427849320016 0.9438714419765777 ['ENSG00000178913|ENST00000313368|TAF7'] 10860 15076 DALNDEINFLR True H1975_Epitope_Rep3 1318.6517293543 1318.65062993586 63.385 2 0.28373897393224584 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF'] 28791 16110 FTDEEVDELYR True PC9_epitope_Rep4 1414.6252398229399 1414.62414993586 69.905 2 0.28371495371217176 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 13709 20598 DQIAKYWEL True PC9_epitope_Rep2 1164.5815245361598 1164.5804299358601 84.663 2 0.28370589242435745 0.00036105427849320016 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 53788 16459 KYFLKPEVL True PC9_epitope_Rep1 1135.6641319613097 1135.66302993586 68.134 2 0.2836311182331983 0.00036105427849320016 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 114803 15727 TTDDWKDFLY True H1975_Epitope_Rep2 1302.57683307854 1302.5757299358602 65.667 2 0.2835291466650413 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 56665 7399 LEAAIADAEQR True NCI_RA007_Epitope_Rep1 1185.59896550545 1185.5978699358602 32.776 2 0.28351867685321436 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 26362 13287 FIGNLNTLVVK True NCI_RA007_Epitope_Rep2 1216.71795843932 1216.7168699358601 56.318 2 0.28351153153349556 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 133313 5218 WEQQEPGERKL True H1975_Epitope_Rep3 1398.6891774921799 1398.68808993586 25.157 2 0.2834973690450422 0.00036105427849320016 0.9438714419765777 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 118135 5795 VAVEEVDEEGK True NCI_RA007_Epitope_Rep2 1202.5666623176596 1202.5655699358601 27.159 2 0.28348943412385874 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 69226 15212 LVNELTEFAK True PC9_epitope_Rep6 1162.6233893481399 1162.6222899358602 70.609 2 0.28342916329543055 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 25313 13580 FEELNADLFR True H1975_Epitope_Rep3 1252.6088019131598 1252.6077099358602 57.518 2 0.28341763758771304 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 106036 14816 SVLQLGNIVFK True NCI_RA007_Epitope_Rep3 1216.71795843932 1216.7168699358601 65.705 2 0.28336678670495347 0.00036105427849320016 0.9438714419765777 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 99518 9222 SLESYAFNM[Oxidation]K True H1975_Epitope_Rep3 1204.5434251557197 1204.5423299358602 40.465 2 0.28336622868351224 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 116514 17575 TYDYNFHSF True PC9_epitope_Rep2 1192.48253877088 1192.4814499358602 72.878 2 0.28335689495628275 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 49356 8735 KIFSGVFVK True NCI_RA007_Epitope_Rep5 1023.6117024656298 1023.61060993586 40.265 2 0.2833443037365758 0.00036105427849320016 0.9438714419765777 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 2337 4357 AEQDPDELNKA True H1975_Epitope_Rep3 1228.55716026312 1228.55606993586 21.877 2 0.2833337551201275 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 76388 9495 NSLESYAFNM[Oxidation]K True H1975_Epitope_Rep3 1318.5863525968596 1318.58524993586 41.528 2 0.28329869085713505 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 112458 5455 TNQELQEINR True H1975_Epitope_Rep1 1243.61567819875 1243.61458993586 26.043 2 0.28329588606504613 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 7123 5444 AQYEEIAQRS True H1975_Epitope_Rep2 1193.5676653771698 1193.5665699358601 25.967 2 0.2832241036461123 0.00036105427849320016 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6C|p.R349Q|1|0.16|ENSG00000170465|chr12:52471163-52471163|C/T|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 118133 5326 VAVEEVDEEGK True H1975_Epitope_Rep3 1202.5666623176596 1202.5655699358601 25.559 2 0.28321589306249606 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 30141 21119 FYQRFPLSF True PC9_epitope_Rep1 1203.6076797143498 1203.60658993586 86.064 2 0.2831981445397638 0.00036105427849320016 0.9438714419765777 ['ENSG00000134109|ENST00000256497|EDEM1', 'ENST00000443790.1_1_3:5229490-5231099:+|nuORF'] 52714 14713 KQLDDLKVEL True PC9_epitope_Rep2 1199.6761531969898 1199.6750499358602 61.861 2 0.28319481906922944 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 37886 6589 HEAM[Oxidation]ITDLEER True NCI_RA007_Epitope_Rep2 1358.6136299738598 1358.61252993586 30.242 2 0.28319210183158083 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 107174 19295 SYNNFFRM[Oxidation]F True PC9_epitope_Rep4 1240.5335291783597 1240.5324299358601 82.324 2 0.2831595237873091 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 124430 12262 VLELVSITANK True NCI_RA007_Epitope_Rep2 1185.69688864157 1185.6957899358601 52.297 2 0.28308762805964854 0.00036105427849320016 0.9438714419765777 ['ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000556798.1_1_12:57627435-57627797:+|nuORF', 'ENST00000554467.5_1_12:57627324-57627898:+|nuORF'] 57204 8998 LEEVTGKLQVA True H1975_Epitope_Rep2 1185.66050313285 1185.6594099358601 39.562 2 0.2830616889528125 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 135251 12654 YAYDGKDYLAL True NCI_RA007_Epitope_Rep5 1290.6132185872598 1290.6121299358601 55.328 2 0.2830283780266618 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 901 7777 [Acetylation]-ADM[Oxidation]QNLVER True H1975_Epitope_Rep3 1132.51827335334 1132.51716993586 34.899 2 0.28298982653991483 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1'] 120517 22090 VFYPYPQYF True PC9_epitope_Rep2 1222.5698972232997 1222.5688099358601 90.442 2 0.2829347045035499 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 61214 20663 LLDPNVKSIFV True PC9_epitope_Rep3 1243.71762408615 1243.71652993586 84.753 2 0.2829304583997793 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3', 'ENSG00000117419|ENST00000372257|ERI3'] 90196 18975 RHIEIFTDL True PC9_epitope_Rep3 1142.6084079903399 1142.60730993586 78.21 2 0.2828838690823114 0.00036105427849320016 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 107150 18662 SYNDELQFLEK True PC9_epitope_Rep4 1384.6510606479599 1384.64996993586 79.861 2 0.28287061177923284 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB', 'ENST00000487704.5_1_22:32797732-32808215:-|nuORF', 'ENST00000463455.1_1_22:32804140-32808230:-|nuORF'] 107149 19373 SYNDELQFLEK True PC9_epitope_Rep2 1384.6510606479599 1384.64996993586 79.894 2 0.28283300102240805 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB', 'ENST00000487704.5_1_22:32797732-32808215:-|nuORF', 'ENST00000463455.1_1_22:32804140-32808230:-|nuORF'] 132159 10412 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5287299358602 44.988 2 0.28278919834886446 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 136621 5583 YIDENQDRY True H1975_Epitope_Rep3 1214.52038083158 1214.5192899358601 26.515 2 0.28269017775100924 0.00036105427849320016 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2', 'CNDP2|p.W309Cfs*23|1|0.3|ENSG00000133313|chr18:74516250-74516250|G/-|frameshift_variant', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 69216 11384 LVNELTEFAK True NCI_RA007_Epitope_Rep4 1162.6233893481399 1162.6222899358602 50.702 2 0.2826251609215004 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 25526 8108 FEQEYTRVC True H1975_Epitope_Rep2 1173.5124590001699 1173.51136993586 36.137 2 0.2826030832434511 0.00036105427849320016 0.9438714419765777 ['ENSG00000126773|ENST00000406854|PCNX4', 'ENST00000483571.5_1_14:60582139-60592559:+|nuORF'] 134812 19057 WYQTKFETL True PC9_epitope_Rep3 1214.5971746002997 1214.5960699358602 78.525 2 0.28259338416177604 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 73926 15003 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69592490379 65.648 3 0.2825751400741596 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 27527 9850 FPGQLNADLR True H1975_Epitope_Rep1 1129.5880068989297 1129.5869099358601 42.821 2 0.2825681342177524 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'TUBB6|p.R241C|1|0.58|ENSG00000176014|chr18:12325510-12325510|C/T|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 26218 14449 FHVEPGLQRL True PC9_epitope_Rep5 1194.6509415086598 1194.6493049037902 60.579 3 0.28254483932712054 0.00036105427849320016 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 137152 9511 YLDPNQRDLY True H1975_Epitope_Rep1 1295.61461556959 1295.61350993586 41.505 2 0.2825010167550042 0.00036105427849320016 0.9438714419765777 ['ENSG00000189144|ENST00000536220|ZNF573'] 47184 17066 IYADNQVMHF True PC9_epitope_Rep2 1236.55974354576 1236.55864993586 70.895 2 0.28249403455593686 0.00036105427849320016 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 31260 6981 [Acetylation]-GDREQLLQR True NCI_RA007_Epitope_Rep2 1155.5996345280898 1155.5985299358601 31.777 2 0.2824611366688551 0.00036105427849320016 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH'] 54047 19410 KYLSVQGQLF True PC9_epitope_Rep3 1181.64445914589 1181.6433699358602 79.886 2 0.28244479934310346 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 33983 17474 GNFNYVEFTR True PC9_epitope_Rep1 1245.5778361380499 1245.5767299358602 72.01 2 0.2824325146400529 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 9789 20695 AYLESFYKF True PC9_epitope_Rep5 1166.5648118428599 1166.56370993586 84.66 2 0.2823903872064941 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 110962 12142 TLDAGKFQIY True H1975_Epitope_Rep2 1154.5971746003 1154.5960699358602 51.788 2 0.28237664897814674 0.00036105427849320016 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 45571 14261 ISGLIYEETR True PC9_epitope_Rep3 1179.6135529404298 1179.61244993586 59.94 2 0.2823652280958676 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 56069 11690 LDLEIATYR True H1975_Epitope_Rep1 1092.58152453616 1092.5804299358601 49.957 2 0.2823639287861527 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 94740 21585 RYLMDPDTFTF True PC9_epitope_Rep3 1404.6383877892797 1404.63728993586 88.322 2 0.28236065639517854 0.00036105427849320016 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 45228 13238 IRLENEIQTYR True PC9_epitope_Rep5 1433.76267678561 1433.76103490379 55.928 3 0.282335761386908 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 3474 9550 [Acetylation]-AGLNSLEAVKR True H1975_Epitope_Rep1 1198.66698581192 1198.6658899358602 41.659 2 0.282301189313979 0.00036105427849320016 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 48445 6792 KEEELQAALAR True NCI_RA007_Epitope_Rep2 1256.67246479888 1256.6708249037902 31.035 3 0.28226836298690244 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH11|p.K1088del|1|0.12|ENSG00000133392|chr16:15737478-15737480|CTT/-|inframe_deletion', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 76259 8669 NSDLSEKLEY True H1975_Epitope_Rep1 1196.55609763396 1196.5550099358602 38.275 2 0.2822503804157868 0.00036105427849320016 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 114917 8145 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 36.28 2 0.2822375292173319 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 101800 12944 SPIENIQRVA True PC9_epitope_Rep1 1125.6142216467701 1125.6131299358601 54.66 2 0.28221465039549853 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 132168 10258 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5281849037901 44.444 3 0.2822075870183959 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 81768 4410 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 22.085 3 0.2821828331608521 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 7857 9373 ATALEYVYK True NCI_RA007_Epitope_Rep5 1056.54916177872 1056.5480699358602 42.694 2 0.2821319167224691 0.00036105427849320016 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 17032 9621 EGLTSIEEVTK True H1975_Epitope_Rep3 1204.61869789052 1204.6176099358602 42.022 2 0.2821124541482048 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 54045 18598 KYLSVQGQLF True PC9_epitope_Rep2 1181.64445914589 1181.6433699358602 76.889 2 0.2819991273303918 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 28862 9366 FTDQQKLIY True H1975_Epitope_Rep2 1154.5971746002997 1154.5960699358602 40.988 2 0.2819451510711425 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 52711 14618 KQLDDLKVEL True PC9_epitope_Rep2 1199.6761531969898 1199.6745149037902 61.497 3 0.2818699052131867 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 22253 4645 ETDPDAQAKAY True H1975_Epitope_Rep2 1207.5356965425499 1207.5345899358601 22.966 2 0.2818475926162811 0.00036105427849320016 0.9438714419765777 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 140689 9231 YYQDTPKQI True PC9_epitope_Rep1 1154.5607890915799 1154.5596899358602 40.359 2 0.2818114392717575 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 14058 9499 DSDINNRLVY True H1975_Epitope_Rep3 1207.58331544131 1207.5822099358602 41.543 2 0.2817644009951133 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170291|Q8TE02-1|ELP5', 'nc|ENSG00000170291|Q8TE02-2|ELP5', 'ENSG00000170291|ENST00000396628|ELP5', 'nc|ENSG00000170291|Q8TE02-3|ELP5'] 112589 8983 TPAQFDADELR True H1975_Epitope_Rep1 1261.5938801250097 1261.59278993586 39.459 2 0.2816920858541782 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 11420 11620 DFM[Oxidation]IQGGDFTR True NCI_RA007_Epitope_Rep2 1301.5710368858895 1301.56992993586 49.79 2 0.28168624017867294 0.00036105427849320016 0.9438714419765777 ['ENSG00000166794|ENST00000300026|PPIB', 'ENST00000561048.1_1_15:64452264-64455191:-|nuORF'] 69225 17422 LVNELTEFAK True PC9_epitope_Rep5 1162.6233893481399 1162.6222899358602 72.014 2 0.2816522258851546 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 61173 14521 LLDLDEELRY True H1975_Epitope_Rep1 1277.6503323719699 1277.6492299358601 61.058 2 0.28156967904031793 0.00036105427849320016 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'nc|ENSG00000119650|Q96FT9-3|IFT43', 'ENST00000554026.5_1_14:76452129-76542971:+|nuORF', 'nc|ENSG00000119650|Q96FT9-4|IFT43'] 77166 16405 NYFLWTEKF True NCI_RA007_Epitope_Rep5 1246.60225998074 1246.60116993586 69.857 2 0.28156869715414173 0.00036105427849320016 0.9438714419765777 ['ENSG00000100351|ENST00000344138|GRAP2'] 139265 9675 YTDFDGTRVY True H1975_Epitope_Rep2 1235.54586730343 1235.5447699358601 42.196 2 0.2815563541878875 0.00036105427849320016 0.9438714419765777 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 119013 12199 VEFTRSLFVN True NCI_RA007_Epitope_Rep3 1210.6346227381798 1210.63352993586 55.118 2 0.2815357613981609 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 1366 4302 AEEEETSIKAA True H1975_Epitope_Rep2 1176.55101225352 1176.5499099358601 21.66 2 0.2815225894192246 0.00036105427849320016 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000481025.1_1_6:33255909-33256589:-|nuORF'] 2533 4730 AEQVQPPRSP True H1975_Epitope_Rep2 1107.5672714543498 1107.5661699358602 23.287 2 0.2814691192544917 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5', 'ENST00000454841.5_1_2:113343759-113346463:+|nuORF', 'ENSG00000125611|ENST00000324913|CHCHD5'] 9785 20765 AYLESFYKF True PC9_epitope_Rep1 1166.5648118428599 1166.56370993586 84.7 2 0.28140818202890966 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 89026 7755 REEEEKLLHLA True H1975_Epitope_Rep2 1365.7252286477299 1365.72358490379 34.783 3 0.28131726294043014 0.00036105427849320016 0.9438714419765777 ['ENSG00000096401|ENST00000371477|CDC5L'] 39370 13270 HLVDEPQNLIK True PC9_epitope_Rep3 1304.7088503076 1304.7072149037901 56.078 3 0.28130982410565214 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 11311 7573 DETNYGIPQR True NCI_RA007_Epitope_Rep2 1191.5520153130299 1191.55090993586 34.083 2 0.2812693883767235 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 124375 10902 VLDYDTSHIY True H1975_Epitope_Rep2 1224.56626839484 1224.56516993586 46.965 2 0.28123604074261765 0.00036105427849320016 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF'] 57245 13612 LEFLNRFEEA True H1975_Epitope_Rep2 1266.6244519773002 1266.62334993586 57.496 2 0.2812293135789524 0.00036105427849320016 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 53923 9354 KYINTDAKF True PC9_epitope_Rep1 1098.5709598524597 1098.5698699358602 40.838 2 0.2812277020552788 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 36022 6958 GVDGYETEGIR True H1975_Epitope_Rep1 1194.5516809598598 1194.5505899358602 31.804 2 0.2812177753194397 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 23970 19073 EYPDRIMNTF True PC9_epitope_Rep1 1284.5808729131597 1284.5797699358602 78.154 2 0.28120852290658754 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 89363 8609 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 38.071 2 0.2811917488476528 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 28372 12099 FSDNDKLYLY True H1975_Epitope_Rep2 1276.59756852312 1276.5964699358601 51.622 2 0.28118170544524573 0.00036105427849320016 0.9438714419765777 ['ENSG00000143390|ENST00000452671|RFX5', 'ENST00000479681.5_1_1:151317580-151318796:-|nuORF', 'nc|ENSG00000143390|P48382-2|RFX5'] 101805 11588 SPIENIQRVA True PC9_epitope_Rep4 1125.6142216467701 1125.6131299358601 52.333 2 0.28114906335511425 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 54616 12875 LADIYRELY True H1975_Epitope_Rep2 1154.5971746003 1154.5960699358602 54.635 2 0.2811459269256377 0.00036105427849320016 0.9438714419765777 ['ENSG00000162227|ENST00000294168|TAF6L'] 94509 5021 RYIAQVKHL True NCI_RA007_Epitope_Rep4 1126.66111226954 1126.65946490379 25.799 3 0.2811373562347025 0.00036105427849320016 0.9438714419765777 ['ENST00000267068.5_2_13:33110791-33110824:-|nuORF'] 56229 14019 LDPSIFESLQK True H1975_Epitope_Rep1 1275.6710678165498 1275.66996993586 59.085 2 0.2810821455798171 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 88314 9943 QYLEQSSKL True PC9_epitope_Rep5 1094.56078909158 1094.5596899358602 43.219 2 0.2810814854991152 0.00036105427849320016 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 73912 16981 NHIEPLKIQL True PC9_epitope_Rep1 1203.6975573479099 1203.69646993586 70.14 2 0.2810750342544701 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 48594 5768 KEIEEYIHKP True H1975_Epitope_Rep2 1284.6714021697198 1284.66976490379 27.181 3 0.2810123867991683 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 87458 4871 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 23.823 2 0.2809487604546455 0.00036105427849320016 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 119311 10236 VELQELNDR True PC9_epitope_Rep2 1114.5618517207397 1114.56074993586 44.708 2 0.2807826151993315 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 17439 8085 EHFQDDVFNEK True NCI_RA007_Epitope_Rep2 1406.6102584651396 1406.60916993586 36.081 2 0.28078220800719234 0.00036105427849320016 0.9438714419765777 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 106982 19134 SYLERHGLINF True PC9_epitope_Rep1 1347.6935345966297 1347.6924299358602 78.391 2 0.28074408007464685 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 114824 17390 TTDFIYQLY True H1975_Epitope_Rep2 1162.55464108198 1162.55354993586 72.183 2 0.28074260741263873 0.00036105427849320016 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 4815 5585 ALEQQVEEM[Oxidation]K True NCI_RA007_Epitope_Rep1 1219.5754535599897 1219.57434993586 25.792 2 0.2807116770953397 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 54336 6217 KYQEVTNNL True NCI_RA007_Epitope_Rep5 1107.5560380643099 1107.5549499358601 30.59 2 0.28070010020763136 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 88052 10165 QVVESAYEVIK True NCI_RA007_Epitope_Rep1 1263.6710678165498 1263.66996993586 43.551 2 0.2806512490221741 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 94125 20430 RWFDKSFTF True PC9_epitope_Rep5 1232.59784330664 1232.59674993586 83.621 2 0.2806222852792786 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 35440 8876 GTDWGEKGYY True H1975_Epitope_Rep2 1174.4931034545798 1174.49200993586 39.111 2 0.2806111996767683 0.00036105427849320016 0.9438714419765777 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000527141.5_1_11:66331406-66331633:-|nuORF'] 138822 8140 YSDKYFDEHY True H1975_Epitope_Rep3 1365.55134660669 1365.54970490379 36.287 3 0.28057009386773196 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 45570 14171 ISGLIYEETR True PC9_epitope_Rep3 1179.6135529404298 1179.61244993586 59.594 2 0.28056602023672167 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 105034 5590 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 28.98 3 0.2805523857419817 0.00036105427849320016 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 116753 12390 TYLEKAIKI True PC9_epitope_Rep4 1077.6433965167298 1077.6422899358602 55.464 2 0.2804710866583202 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 72408 15194 MTELPAPLSY True H1975_Epitope_Rep2 1120.5474475265598 1120.54634993586 63.6 2 0.2804623461479625 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 131258 8333 VVQELQQAISK True H1975_Epitope_Rep3 1241.6979512707296 1241.6968499358602 37.037 2 0.2804600539392544 0.00036105427849320016 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF'] 2096 10823 AELNEFLTR True H1975_Epitope_Rep3 1091.56112344475 1091.56002993586 46.711 2 0.28044993806625856 0.00036105427849320016 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 77137 14634 NYAWVYYHL True NCI_RA007_Epitope_Rep3 1227.57129420563 1227.57018993586 64.916 2 0.28043902008468446 0.00036105427849320016 0.9438714419765777 ['ENSG00000119917|ENST00000371818|IFIT3'] 89204 16602 REIFLSQPILL True H1975_Epitope_Rep2 1327.7863723523099 1327.78526993586 69.088 2 0.28042313997445123 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 70386 19391 LYQEVFGRL True PC9_epitope_Rep2 1123.6025943339098 1123.6014899358602 79.965 2 0.2803983216762113 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 11379 6330 DFHVDEQTTVK True H1975_Epitope_Rep1 1317.62009487285 1317.61843490379 29.412 3 0.280380244989698 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 65441 11166 LSEWQKELY True H1975_Epitope_Rep2 1194.5920892198599 1194.59098993586 47.987 2 0.2803413020274566 0.00036105427849320016 0.9438714419765777 ['ENSG00000196453|ENST00000247930|ZNF777'] 46246 8579 ITDSAGHILYS True H1975_Epitope_Rep2 1175.58225281215 1175.5811499358601 37.952 2 0.28032878166975234 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 45020 11131 IQLVEEELDR True NCI_RA007_Epitope_Rep1 1242.6455813446998 1242.64448993586 47.297 2 0.2803274853848691 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 72427 8462 MTEVLPNQRY True H1975_Epitope_Rep2 1249.6125073946098 1249.6114099358601 37.503 2 0.2803072195469434 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100003|O76054-5|SEC14L2', 'nc|ENSG00000100003|O76054-4|SEC14L2', 'ENSG00000100003|ENST00000615189|SEC14L2', 'ENST00000454552.5_3_22:30812232-30824714:+|nuORF'] 53752 11572 KYFDEHYEY True PC9_epitope_Rep2 1292.53496826656 1292.5338699358601 49.836 2 0.28027973640881904 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 56912 6897 LEDQVEM[Oxidation]LR True H1975_Epitope_Rep1 1147.55432419259 1147.5532299358601 31.569 2 0.28025204447145496 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH', 'ENST00000589990.1_1_19:11553236-11556289:+|nuORF'] 45842 4734 ISQEQM[Oxidation]QEFR True H1975_Epitope_Rep3 1310.59250060646 1310.5914099358602 23.335 2 0.28016608068191023 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 9787 20693 AYLESFYKF True PC9_epitope_Rep3 1166.5648118428599 1166.56370993586 84.869 2 0.2801469530722012 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 40870 8903 HVLVTLGEK True PC9_epitope_Rep1 994.58113061334 994.58002993586 39.084 2 0.2801354621190889 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 65432 5198 LSEVNRTGTQY True H1975_Epitope_Rep3 1266.62042922602 1266.6193299358602 25.084 2 0.2800992705408558 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 40577 13116 HTDDPLTWDY True H1975_Epitope_Rep1 1261.52513185885 1261.5240299358602 55.542 2 0.2800748966991237 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 129277 6681 VTDQNKIVTY True H1975_Epitope_Rep2 1179.6135529404298 1179.61244993586 30.608 2 0.28001944627577874 0.00036105427849320016 0.9438714419765777 ['ENSG00000077514|ENST00000263681|POLD3', 'ENST00000532497.5_1_11:74303703-74322559:+|nuORF', 'ENST00000532784.5_1_11:74303703-74306426:+|nuORF'] 53369 6144 KTYGEIFEK True NCI_RA007_Epitope_Rep3 1113.57062549929 1113.5695299358601 31.16 2 0.27997631498918213 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 83166 7757 PYTKVEESF True NCI_RA007_Epitope_Rep3 1098.5233409536997 1098.5222499358601 37.634 2 0.2798952930073407 0.00036105427849320016 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 131260 8742 VVQELQQAISK True NCI_RA007_Epitope_Rep2 1241.6979512707296 1241.6968499358602 38.651 2 0.27989434715295897 0.00036105427849320016 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF'] 101806 11683 SPIENIQRVA True PC9_epitope_Rep4 1125.6142216467701 1125.6131299358601 52.7 2 0.27986815833109785 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 28907 9357 FTEEKWSQY True H1975_Epitope_Rep2 1216.540053647 1216.53894993586 40.954 2 0.2798498901417734 0.00036105427849320016 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 125629 12499 VM[Oxidation]ENFVAFVDK True NCI_RA007_Epitope_Rep2 1313.6325745132897 1313.6314699358602 53.229 2 0.2798267371926986 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 94709 8284 RYLEQLHQL True NCI_RA007_Epitope_Rep5 1198.64585612822 1198.64422490379 38.542 3 0.27981403645024244 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 109783 5825 THISSQNSEL True PC9_epitope_Rep1 1114.52546621202 1114.52436993586 27.22 2 0.2798139522322685 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 12605 5706 DLEAHIDSANK True NCI_RA007_Epitope_Rep2 1211.57823006087 1211.57712993586 26.81 2 0.2798001272016748 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 132131 6698 VYISEHEHF True NCI_RA007_Epitope_Rep3 1159.5298233164701 1159.5287299358602 33.429 2 0.27966202776262167 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 134820 16488 WYQTKFETL True PC9_epitope_Rep6 1214.5971746002997 1214.5960699358602 75.846 2 0.27963486551640554 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 47236 18728 IYDSVKVYF True PC9_epitope_Rep4 1132.5804619069997 1132.57936993586 80.119 2 0.27962274372885726 0.00036105427849320016 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 131928 12194 VYEYVVERF True NCI_RA007_Epitope_Rep5 1202.5971746002995 1202.5960699358602 53.558 2 0.2796096120113822 0.00036105427849320016 0.9438714419765777 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 64041 8927 LQDGEFSM[Oxidation]DLR True H1975_Epitope_Rep3 1325.59216625329 1325.59106993586 39.335 2 0.27958393610079824 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 39113 9009 HLDEAQRLLY True H1975_Epitope_Rep2 1256.65133543148 1256.6502299358601 39.605 2 0.27958106530767174 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000256060|Q8IVP9-2|ZNF547', 'ENSG00000152433|ENST00000282282|ZNF547', 'ENST00000600421.1_1_19:57901368-57922291:+|nuORF', 'nc|ENSG00000188785|Q8NEK5|ZNF548', 'ENSG00000188785|ENST00000336128|ZNF548'] 85373 17734 QLEDELVSLQK True PC9_epitope_Rep1 1300.6874461566802 1300.68634993586 73.011 2 0.27957805811871145 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 54376 17841 KYQIINEEF True PC9_epitope_Rep3 1182.5920892198599 1182.59098993586 73.821 2 0.27955654474484765 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 52176 8901 KMDDLNLHY True H1975_Epitope_Rep2 1147.53319444475 1147.53208993586 39.205 2 0.2795115640414357 0.00036105427849320016 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF', 'SPRYD3|p.N13K|1|0.38|ENSG00000167778|chr12:53077246-53077246|G/T|missense_variant'] 48869 11714 KESYSIYVYK True PC9_epitope_Rep3 1278.6496040959798 1278.6479549037902 50.076 3 0.2794720137468493 0.00036105427849320016 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 101815 12214 SPIENIQRVAA True PC9_epitope_Rep4 1196.6513354314802 1196.6502299358601 54.8 2 0.27946493222398333 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 87475 13633 QTETGTPYMLY True H1975_Epitope_Rep3 1302.5802042068199 1302.57910993586 57.727 2 0.27944387153128675 0.00036105427849320016 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 132453 15468 VYNSEYYHF True PC9_epitope_Rep2 1220.5138388991602 1220.51274993586 64.774 2 0.27944001666829965 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 139732 20068 YTYEELLNRV True PC9_epitope_Rep2 1298.65066672514 1298.6495699358602 82.597 2 0.2794115028409682 0.00036105427849320016 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 101388 21331 SMVEDITGLRL True PC9_epitope_Rep3 1232.6434731697198 1232.6423699358602 87.346 2 0.27937847888557366 0.00036105427849320016 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 129159 5793 VTDDSPKYNY True H1975_Epitope_Rep2 1200.5298828861198 1200.52878993586 27.275 2 0.2793723266248623 0.00036105427849320016 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 29120 8229 FTSIGEDYDER True H1975_Epitope_Rep3 1330.5677249468197 1330.5666299358602 36.637 2 0.2793582696737137 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 16369 4857 EELEEEQRTEE True NCI_RA007_Epitope_Rep2 1419.6001472739097 1419.5990499358602 23.516 2 0.27935538095962154 0.00036105427849320016 0.9438714419765777 ['ENSG00000182534|ENST00000449428|MXRA7'] 9779 15124 AYLESFYKF True NCI_RA007_Epitope_Rep1 1166.5648118428599 1166.56370993586 62.898 2 0.27933741884509233 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 113673 16041 TRDELEWKL True PC9_epitope_Rep5 1188.6138872935999 1188.61225490379 66.69 3 0.2793352037315643 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 138946 6187 YSEGYPGQRY True H1975_Epitope_Rep3 1218.53055159246 1218.5294499358602 28.811 2 0.27933455807275825 0.00036105427849320016 0.9438714419765777 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 77635 11980 NYYEQWGK True PC9_epitope_Rep1 1086.47705946762 1086.4759699358601 50.943 2 0.2793221233519641 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 32138 17641 GFAFVQYVNER True PC9_epitope_Rep6 1328.65133543148 1328.6502299358601 80.495 2 0.2793195917202093 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC'] 110712 4998 TKDGVVEITGK True NCI_RA007_Epitope_Rep2 1145.62920300457 1145.6275649037902 24.065 3 0.2792785344768472 0.00036105427849320016 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 94651 19657 RYLDWIKKI True PC9_epitope_Rep3 1233.7233781729299 1233.7217249037901 80.846 3 0.2792132593377716 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 56466 10357 LDTDDLDEIEK True H1975_Epitope_Rep3 1304.5983563687598 1304.5972499358602 44.893 2 0.27921297617851715 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'ENST00000569319.5_1_16:70399881-70405886:+|nuORF', 'ENST00000569771.5_1_16:70395504-70405886:+|nuORF', 'nc|ENSG00000260537|Q9UMR2-3|DDX19B', 'nc|ENSG00000168872|Q9NUU7-2|DDX19A'] 139449 6424 YTETEPYHNY True H1975_Epitope_Rep2 1315.5356965425499 1315.5345899358601 29.63 2 0.27917073028206824 0.00036105427849320016 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 113009 7053 TPTLVEVSR True NCI_RA007_Epitope_Rep3 1000.55530978832 1000.55420993586 34.862 2 0.2790869771802082 0.00036105427849320016 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 138357 7844 YRDEFSHQV True PC9_epitope_Rep5 1179.53088594563 1179.52924490379 35.115 3 0.2790704888624409 0.00036105427849320016 0.9438714419765777 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.H813Ifs*24|1|0.36|ENSG00000109111|chr17:28684908-28684908|C/-|frameshift_variant'] 52720 14015 KQLDDLKVEL True PC9_epitope_Rep4 1199.6761531969898 1199.6745149037902 61.821 3 0.27906660730078026 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 53453 10958 KVIDPATATSV True PC9_epitope_Rep5 1100.607739284 1100.60664993586 47.139 2 0.2790370465550708 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 79539 5264 PGSEETQTLVR True H1975_Epitope_Rep3 1215.6095301891498 1215.6084299358602 25.33 2 0.27901975038869015 0.00036105427849320016 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 24066 15888 EYQKVWNLF True NCI_RA007_Epitope_Rep1 1225.6131590176099 1225.61206993586 65.899 2 0.27899791775404786 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 118387 5977 VDKLDASESLR True NCI_RA007_Epitope_Rep2 1231.64083031743 1231.63918490379 27.858 3 0.27896804698018146 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 86319 21296 QQHSILLLL True PC9_epitope_Rep1 1063.6389798426299 1063.6378899358601 86.743 2 0.27895621041073587 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 40585 13225 HTDDPLTWDY True H1975_Epitope_Rep3 1261.52513185885 1261.5240299358602 56.125 2 0.2789555723959948 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 135782 7396 YENEVALRQ True PC9_epitope_Rep2 1120.5512870370399 1120.55018993586 33.828 2 0.2788828853262954 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 85383 8268 QLEDGRTLSDY True H1975_Epitope_Rep3 1295.59935942827 1295.5982699358601 36.786 2 0.2788804648625961 0.00036105427849320016 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 17507 9582 EHINEGETAM[Oxidation]L True PC9_epitope_Rep1 1258.5499670881397 1258.54886993586 41.713 2 0.27885952165434447 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 139814 18818 YVDDTQFVRF True PC9_epitope_Rep4 1288.60880191316 1288.6077099358602 80.469 2 0.2788364617988559 0.00036105427849320016 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 6981 6261 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep2 935.4348606187698 935.43431496793 28.958 1 0.27882363881487054 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 116570 13892 TYGEIFEKF True NCI_RA007_Epitope_Rep2 1132.54407639828 1132.54357496793 58.69 1 0.2788040824634931 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 43288 9845 IHDPQLLTER True PC9_epitope_Rep5 1220.65133543148 1220.6496749037901 42.839 3 0.2787359877082835 0.00036105427849320016 0.9438714419765777 ['ENSG00000115866|ENST00000264161|DARS1', 'nc|ENSG00000115866|P14868-2|DARS1', 'ENST00000478212.5_1_2:136664888-136669084:-|nuORF', 'ENST00000491481.1_1_2:136668634-136670100:-|nuORF', 'ENST00000489964.5_1_2:136664888-136672125:-|nuORF'] 22218 9705 ETDKNGFLQY True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 42.314 2 0.2786812943979479 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 116538 14532 TYESIFSHF True NCI_RA007_Epitope_Rep4 1129.50802524273 1129.5069299358602 63.27 2 0.27863908398262227 0.00036105427849320016 0.9438714419765777 ['ENST00000530761.5_1_11:117857521-117870353:+|nuORF', 'ENSG00000110324|ENST00000227752|IL10RA'] 139322 7250 YTDQFSRNY True H1975_Epitope_Rep2 1192.51490152832 1192.51380993586 32.821 2 0.27856991963819355 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 43798 5218 IKIIAPPERK True NCI_RA007_Epitope_Rep4 1163.73902823707 1163.7373949037901 26.605 3 0.2785635670042383 0.00036105427849320016 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 16559 6526 EEQLQQIRAE True NCI_RA007_Epitope_Rep4 1242.6204292260197 1242.6193299358602 31.709 2 0.27855972939983287 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 48668 7990 KELEPLKEMTA True H1975_Epitope_Rep2 1287.67443894483 1287.6733499358602 35.682 2 0.2784849756658659 0.00036105427849320016 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A'] 7538 2635 ASFDKAKLK True NCI_RA007_Epitope_Rep4 1006.58113061334 1006.58002993586 14.757 2 0.2784779470270136 0.00036105427849320016 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 23539 22156 EWSPYTKIFQF True PC9_epitope_Rep1 1444.7027022979998 1444.70160993586 90.038 2 0.27847510946369114 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 135615 6176 YEENSHLTSV True H1975_Epitope_Rep2 1177.52513185885 1177.5240299358602 28.726 2 0.2784179536757207 0.00036105427849320016 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2'] 61272 8482 LLDSSQKNLY True H1975_Epitope_Rep2 1179.61355294043 1179.61244993586 37.578 2 0.2784152778556538 0.00036105427849320016 0.9438714419765777 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 44406 9669 INEVENQILTR True NCI_RA007_Epitope_Rep1 1327.7095785835897 1327.7084899358601 41.609 2 0.2783618126176663 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 104928 16391 STFVLDEFKR True PC9_epitope_Rep3 1240.6451874218799 1240.6435349037902 68.186 3 0.27834435909537986 0.00036105427849320016 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 88616 18218 RAPFDLFENR True PC9_epitope_Rep5 1263.63601972051 1263.6343649037901 75.088 3 0.2783384221500452 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 114859 13332 TTDLFGRDLSY True H1975_Epitope_Rep2 1286.6142812164198 1286.6131899358602 56.414 2 0.2782827333781995 0.00036105427849320016 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 89731 10048 REYQELMSV True NCI_RA007_Epitope_Rep4 1153.54375912845 1153.5426699358602 45.495 2 0.27826441480281816 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 106285 5238 SVQSDQGYISR True NCI_RA007_Epitope_Rep5 1238.58912909774 1238.58802993586 26.845 2 0.2782571950460504 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 42679 20051 IEVIEIMTDR True PC9_epitope_Rep5 1217.63257413285 1217.6314699358602 82.18 2 0.27825385741491754 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 94652 19559 RYLDWIKKI True PC9_epitope_Rep5 1233.7233781729299 1233.7217249037901 80.283 3 0.2782360438900401 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 69218 17524 LVNELTEFAK True PC9_epitope_Rep1 1162.6233893481399 1162.6222899358602 72.2 2 0.2782181733856028 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 27665 18944 FQDDRYLYM True PC9_epitope_Rep3 1249.54375912845 1249.5426699358602 78.093 2 0.27819102321287065 0.00036105427849320016 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000582445.1_1_18:18625251-18629157:-|nuORF', 'ENSG00000134318|ENST00000315872|ROCK2'] 117032 8308 TYQEVAQKF True NCI_RA007_Epitope_Rep2 1112.5502244078798 1112.54912993586 36.955 2 0.2781866446014844 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 24331 9821 FADLSEAANR True PC9_epitope_Rep2 1092.5199869087598 1092.5188899358602 43.112 2 0.2781526614384208 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 102634 15774 SQDARFYAL True PC9_epitope_Rep3 1069.51925863277 1069.5181699358602 65.833 2 0.2781302831645677 0.00036105427849320016 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 71970 15202 MPWGDPNYRSA True PC9_epitope_Rep3 1292.5608061749201 1292.5597099358602 63.619 2 0.2781294299617912 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 75944 20266 NRFNYPFEL True PC9_epitope_Rep2 1198.5771078620598 1198.5760099358602 83.373 2 0.2781198239846676 0.00036105427849320016 0.9438714419765777 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 88053 10100 QVVESAYEVIK True NCI_RA007_Epitope_Rep2 1263.6710678165498 1263.66996993586 43.875 2 0.27809538418594243 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 132140 10052 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5281849037901 43.533 3 0.27807860175995214 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 61370 14601 LLEKEILFY True H1975_Epitope_Rep1 1166.6587122276999 1166.6576099358601 61.371 2 0.27805242082861165 0.00036105427849320016 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5'] 84575 16548 QHDFTSQIF True PC9_epitope_Rep4 1121.51417325233 1121.5130699358601 71.626 2 0.2780406505178219 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 15091 8558 EADEYLDKY True H1975_Epitope_Rep2 1144.49243474824 1144.4913299358602 37.875 2 0.2780260566168372 0.00036105427849320016 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 73321 17798 NELESYAYSLK True PC9_epitope_Rep1 1315.62959692739 1315.6284899358602 73.255 2 0.27802323531179673 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 48966 15919 KEYWFVLTA True H1975_Epitope_Rep2 1155.59644632431 1155.5953499358602 66.433 2 0.2780215099489198 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 106457 10219 SVVDHFNRI True PC9_epitope_Rep4 1085.56179215109 1085.5606899358602 46.986 2 0.27801813160109784 0.00036105427849320016 0.9438714419765777 ['ENSG00000103035|ENST00000219313|PSMD7', 'ENST00000566015.1_1_16:74330767-74334139:+|nuORF', 'ENST00000422197.2_1_1:51837944-51838202:+|nuORF'] 11738 8075 DHHENKYLL True PC9_epitope_Rep5 1167.56727145435 1167.56563490379 35.999 3 0.2780149600370877 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 129902 4991 VTLTSEEEAR True NCI_RA007_Epitope_Rep3 1133.5564319871298 1133.55532993586 26.631 2 0.27791999799205913 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 23760 10422 EYIRSLNQF True NCI_RA007_Epitope_Rep3 1168.58767254576 1168.58656993586 48.064 2 0.27790941202406333 0.00036105427849320016 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 85374 17210 QLEDELVSLQK True PC9_epitope_Rep2 1300.6874461566802 1300.68634993586 71.455 2 0.27790479048081773 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 38069 7060 HEMFPAVHAA True H1975_Epitope_Rep3 1108.5123994305197 1108.51130993586 32.121 2 0.27787276352641 0.00036105427849320016 0.9438714419765777 ['ENSG00000113638|ENST00000337702|TTC33'] 23849 7822 EYLTKVDKL True NCI_RA007_Epitope_Rep4 1107.6175756917098 1107.61646993586 36.777 2 0.2778523808053115 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 137059 9448 YLAEFATGNDR True NCI_RA007_Epitope_Rep1 1255.5833154413099 1255.5822099358602 40.744 2 0.2778469330265127 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000453697.1_1_7:63894611-63894797:+|nuORF'] 77307 14734 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.6069699358602 61.493 2 0.27784390639405 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 12330 12214 DIVENYFM[Oxidation]R True H1975_Epitope_Rep1 1201.54375950889 1201.5426699358602 52.003 2 0.2778379539583503 0.00036105427849320016 0.9438714419765777 ['ENSG00000130726|ENST00000253024|TRIM28'] 135247 12213 YAYDGKDYLAL True NCI_RA007_Epitope_Rep3 1290.6132185872598 1290.6121299358601 55.177 2 0.27779425639118394 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 73318 11277 NELESYAYSLK True H1975_Epitope_Rep3 1315.62959692739 1315.6284899358602 48.482 2 0.2777609973618213 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 72230 11893 MRYNEKELQAL True PC9_epitope_Rep2 1393.70238502817 1393.70074490379 51.071 3 0.2777343947991737 0.00036105427849320016 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 107168 21745 SYNNFFRMF True PC9_epitope_Rep1 1224.53861417836 1224.53750993586 88.475 2 0.27773053745533643 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 139453 6569 YTETEPYHNY True H1975_Epitope_Rep3 1315.5356965425499 1315.5345899358601 30.225 2 0.2777173960091287 0.00036105427849320016 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 67123 11634 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 49.819 2 0.2777018589644036 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 27330 9592 FM[Oxidation]DPGPEGKLY True H1975_Epitope_Rep2 1268.574725284 1268.57362993586 41.87 2 0.2776819720744285 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 6404 14817 APSDLYQIILK True H1975_Epitope_Rep3 1259.7125387057101 1259.7114499358602 62.374 2 0.2775723057633901 0.00036105427849320016 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000527897.1_1_11:64953662-64954841:+|nuORF'] 73924 14905 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69592490379 65.273 3 0.2775355801913126 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 139783 12571 YVDDASWMRY True H1975_Epitope_Rep2 1304.54957278488 1304.54846993586 53.448 2 0.2774762177907266 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 93874 8297 RVFVVGVGMTK True NCI_RA007_Epitope_Rep5 1191.67979910879 1191.67816490379 38.591 3 0.27742413103544433 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 24222 17485 EYVNDFDLLKF True NCI_RA007_Epitope_Rep4 1401.6816325002499 1401.68052993586 75.701 2 0.27736552409164134 0.00036105427849320016 0.9438714419765777 ['ENSG00000204103|ENST00000373313|MAFB'] 107172 19491 SYNNFFRMF True PC9_epitope_Rep6 1224.53861417836 1224.53750993586 87.634 2 0.27734720323965556 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 86712 9496 QRIIQQETL True PC9_epitope_Rep4 1127.62987171091 1127.6287699358602 44.138 2 0.27732837224931617 0.00036105427849320016 0.9438714419765777 ['ENSG00000180182|ENST00000324817|MED14'] 28772 7372 FTDEEGYGRY True H1975_Epitope_Rep1 1235.50948179471 1235.5083899358601 33.362 2 0.2773202515981815 0.00036105427849320016 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 134894 11533 YADNQVMHFY True H1975_Epitope_Rep2 1286.5390081011801 1286.5379099358602 49.421 2 0.2773078738117134 0.00036105427849320016 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 22305 15759 ETEEDKFLLLY True H1975_Epitope_Rep1 1398.6918628307799 1398.69076993586 65.922 2 0.2773015445288003 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 136625 10027 YIDEQFERY True H1975_Epitope_Rep1 1261.5615173675699 1261.5604299358602 43.507 2 0.27727632583691875 0.00036105427849320016 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 125625 12027 VM[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1313.6325745132897 1313.6314699358602 51.272 2 0.2772689011706187 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 41583 8482 IDEPLEGSEDR True PC9_epitope_Rep2 1258.56772494682 1258.5666299358602 37.993 2 0.2772592772659222 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 131681 20269 VWMRSPLSTF True PC9_epitope_Rep2 1222.61686449906 1222.61576993586 83.386 2 0.27725329985498437 0.00036105427849320016 0.9438714419765777 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF', 'chr15:60364523-60370591|201|71.34|0.76|6.56|-|0|ANXA2,None|1', 'chr15:60364523-60366446|150|115.17|0.14|9.65|-|0|TE_info:SVA_E,SVA_E_dup534,SVA,Retroposon,donor,+,60366446,60366898|ANXA2,None|4'] 84571 17274 QHDFTSQIF True PC9_epitope_Rep2 1121.51417325233 1121.5130699358601 71.702 2 0.2772444072352155 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 7489 12566 ASEAEMRLFY True H1975_Epitope_Rep2 1215.55940919259 1215.55830993586 53.429 2 0.27720988136040753 0.00036105427849320016 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 132170 10170 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5287299358602 44.106 2 0.2771807805587628 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 70168 21769 LYLGLFNRL True PC9_epitope_Rep5 1107.6440652230701 1107.64296993586 88.763 2 0.2771638425745782 0.00036105427849320016 0.9438714419765777 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 13802 7180 DQVANSAFVER True H1975_Epitope_Rep3 1234.59421447818 1234.5931099358602 32.593 2 0.2771459507324343 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 135097 13920 YALYDATYETK True PC9_epitope_Rep2 1336.61869789052 1336.6176099358602 58.823 2 0.27711969073178955 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 54360 16370 KYQEVTNNLEF True PC9_epitope_Rep5 1383.6670450652698 1383.66594993586 67.963 2 0.2770709166367879 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 61532 11409 LLGELLQDNAK True H1975_Epitope_Rep3 1212.67140216972 1212.6703099358601 49.001 2 0.27703203983601093 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 15596 7292 EATTEFSVDAR True H1975_Epitope_Rep1 1224.56224564356 1224.5611499358602 33.059 2 0.2770275742692166 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 132905 12589 VYTTTVHWL True NCI_RA007_Epitope_Rep4 1118.5760452329 1118.57494993586 55.445 2 0.27702476082124283 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 53798 13607 KYFLWEEKF True NCI_RA007_Epitope_Rep2 1288.6492101731599 1288.64810993586 57.568 2 0.27697423189587544 0.00036105427849320016 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 24070 15329 EYQKVWNLF True NCI_RA007_Epitope_Rep4 1225.6131590176099 1225.61206993586 66.621 2 0.2769242111645255 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 35396 12892 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56476993586 54.66 2 0.27691657337339104 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 26785 10768 FLDSTGSRLDY True H1975_Epitope_Rep2 1272.59863115228 1272.5975299358602 46.449 2 0.2768802984828171 0.00036105427849320016 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 7540 3066 ASFDKAKLK True NCI_RA007_Epitope_Rep5 1006.58113061334 1006.58002993586 16.984 2 0.2768742570407309 0.00036105427849320016 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 44562 8118 IPEEEQM[Oxidation]GLLR True H1975_Epitope_Rep1 1329.6598518902897 1329.6587499358602 36.171 2 0.2768254497076866 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 69919 21373 LYDIILKNF True PC9_epitope_Rep3 1137.64339651673 1137.6422899358602 87.51 2 0.2767974082083745 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 116744 8790 TYLEKAIKI True NCI_RA007_Epitope_Rep3 1077.6433965167298 1077.6422899358602 41.664 2 0.2767693435077609 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 16014 12440 EEAENTLQSFR True PC9_epitope_Rep5 1322.61025846514 1322.60916993586 52.852 2 0.27676183980086244 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 16012 12549 EEAENTLQSFR True PC9_epitope_Rep3 1322.61025846514 1322.60916993586 53.291 2 0.2767477899828586 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 54792 9850 LAEYDLDKY True H1975_Epitope_Rep1 1128.5339056373998 1128.53280993586 42.821 2 0.276729047709236 0.00036105427849320016 0.9438714419765777 ['ENSG00000136045|ENST00000412830|PWP1', 'nc|ENSG00000136045|Q13610-2|PWP1'] 10801 16093 DAELVAQWNY True H1975_Epitope_Rep2 1207.5509526838698 1207.54984993586 67.111 2 0.27668679833841 0.00036105427849320016 0.9438714419765777 ['ENSG00000022277|ENST00000357348|RTF2'] 53750 11571 KYFDEHYEY True PC9_epitope_Rep2 1292.53496826656 1292.53333490379 49.832 3 0.27668459144395247 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 139680 6320 YTTDRVM[Oxidation]TV True PC9_epitope_Rep2 1100.5172104078802 1100.5161099358602 29.707 2 0.2766842562505114 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 64982 11774 LSDDRSNILIY True H1975_Epitope_Rep3 1307.67213044571 1307.6710299358601 50.433 2 0.27667561042657346 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142892|Q92643-2|PIGK', 'ENSG00000142892|ENST00000370812|PIGK', 'PIGK-TGFBR3|1|fusion', 'PIGK-TGFBR3|2|fusion'] 52151 14893 KLVILEGELER True PC9_epitope_Rep2 1297.7605515272899 1297.7589149037901 62.552 3 0.2765927065915813 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 77360 10205 NYLNHWNHF True NCI_RA007_Epitope_Rep4 1243.55229009655 1243.55118993586 46.108 2 0.2765875810332779 0.00036105427849320016 0.9438714419765777 ['ENSG00000167363|ENST00000300784|FN3K'] 33978 17725 GNFNYIEFTR True PC9_epitope_Rep4 1259.5934862021898 1259.5923899358602 76.203 2 0.2765833014816003 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 132128 6606 VYISEHEHF True NCI_RA007_Epitope_Rep3 1159.5298233164701 1159.5281849037901 33.044 3 0.27658114642014164 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 52710 15519 KQLDDLKVEL True PC9_epitope_Rep1 1199.6761531969898 1199.6750499358602 64.517 2 0.27653709300275153 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 129134 8723 VTDAVALRV True H1975_Epitope_Rep1 942.5498304850599 942.54872993586 38.481 2 0.2765174836397761 0.00036105427849320016 0.9438714419765777 ['ENST00000442885.2_1_11:65655295-65655958:-|nuORF', 'ENST00000528937.1_1_11:65654989-65655958:-|nuORF', 'ENST00000532679.5_1_11:65653270-65655931:-|nuORF', 'ENSG00000172500|ENST00000357519|FIBP', 'nc|ENSG00000172500|O43427|FIBP'] 55968 10408 LDIDSPPITAR True NCI_RA007_Epitope_Rep1 1196.6401020414398 1196.63900993586 44.469 2 0.2765022912139498 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 54423 20198 KYSPFVVSF True PC9_epitope_Rep2 1072.5593325396 1072.55822993586 83.107 2 0.27649274043232275 0.00036105427849320016 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 61239 8857 LLDQGQLNKY True H1975_Epitope_Rep3 1190.62953735774 1190.62844993586 39.074 2 0.27647242743531003 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 77140 20951 NYAWVYYHL True PC9_epitope_Rep5 1227.57129420563 1227.57018993586 85.647 2 0.2764526596625344 0.00036105427849320016 0.9438714419765777 ['ENSG00000119917|ENST00000371818|IFIT3'] 65279 9596 LSEINKPNFY True H1975_Epitope_Rep1 1223.61863832087 1223.61754993586 41.836 2 0.2764505296653598 0.00036105427849320016 0.9438714419765777 ['ENSG00000067334|ENST00000436063|DNTTIP2', 'DNTTIP2|p.N616Tfs*33|1|0.3|ENSG00000067334|chr1:93873174-93873174|T/-|frameshift_variant'] 11699 7315 DHFASVHSV True PC9_epitope_Rep3 997.46174375665 997.46064993586 33.143 2 0.276418842510458 0.00036105427849320016 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 93954 15121 RVLQALEGLK True PC9_epitope_Rep3 1125.6869926642098 1125.6853349037901 63.299 3 0.27638317725349615 0.00036105427849320016 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 138916 10220 YSEDLSDMHY True H1975_Epitope_Rep1 1258.48121844154 1258.48012993586 44.254 2 0.2763820328224898 0.00036105427849320016 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 4567 9799 ALAAAGYDVEK True PC9_epitope_Rep5 1106.56078909158 1106.5596899358602 42.661 2 0.2763318722579794 0.00036105427849320016 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6'] 135601 7122 YEELQVTAGR True H1975_Epitope_Rep1 1164.5775017848798 1164.57640993586 32.419 2 0.2763014954784401 0.00036105427849320016 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 135696 14544 YEIKQFLECA True H1975_Epitope_Rep2 1242.59546034814 1242.5943699358602 61.1 2 0.2762542426524733 0.00036105427849320016 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2'] 42159 11815 IEFASFEDAK True NCI_RA007_Epitope_Rep1 1155.5448046742697 1155.54370993586 49.937 2 0.27625193768425643 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 116699 20361 TYKDYVDLF True PC9_epitope_Rep2 1162.55464108198 1162.55354993586 83.741 2 0.27623542254857886 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 45509 13087 ISESIKELQFY True H1975_Epitope_Rep3 1355.6972825643898 1355.69618993586 55.582 2 0.27621853838486415 0.00036105427849320016 0.9438714419765777 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF', 'ENST00000544507.1_1_11:114319952-114320694:+|nuORF', 'ENST00000539788.5_1_11:114314891-114320694:+|nuORF', 'ENST00000543131.5_1_11:114310234-114320694:+|nuORF', 'ENST00000538403.5_1_11:114314877-114320694:+|nuORF', 'nc|ENSG00000076043|Q9Y3B8-2|REXO2', 'nc|ENSG00000076043|Q9Y3B8-3|REXO2', 'ENSG00000076043|ENST00000265881|REXO2'] 112462 6065 TNQELQEINR True NCI_RA007_Epitope_Rep2 1243.61567819875 1243.61458993586 28.197 2 0.27613607556286285 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 2796 8130 [Acetylation]-AEVEETLKR True H1975_Epitope_Rep1 1115.58225312845 1115.5811499358601 36.21 2 0.27612766259794874 0.00036105427849320016 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'nc|ENSG00000125971|Q9NP97-2|DYNLRB1', 'ENSG00000168589|ENST00000305904|DYNLRB2'] 13921 19483 DRFEFPEQL True PC9_epitope_Rep4 1179.5560380643099 1179.5549499358601 83.058 2 0.2761189287679609 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 136410 13166 YHFEEVQKL True PC9_epitope_Rep1 1191.5924235730297 1191.5907749037901 55.508 3 0.27611233859833606 0.00036105427849320016 0.9438714419765777 ['ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant'] 53899 20455 KYIENLDNITF True PC9_epitope_Rep1 1368.6925315371197 1368.69142993586 83.491 2 0.2760995412910131 0.00036105427849320016 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 133239 8025 WEEERNFGA True H1975_Epitope_Rep2 1136.4886867804798 1136.4875899358601 35.816 2 0.27608741288851907 0.00036105427849320016 0.9438714419765777 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000515226.5_1_5:71524027-71524234:-|nuORF', 'ENST00000522562.5_1_5:71523001-71533927:-|nuORF'] 26583 6485 FKDLGEEHFK True PC9_epitope_Rep4 1248.6138872935996 1248.61225490379 32.063 3 0.2760748805681211 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 101807 12877 SPIENIQRVA True PC9_epitope_Rep5 1125.6142216467701 1125.6131299358601 54.541 2 0.276062777329098 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 94393 13653 RYFDPANGKF True PC9_epitope_Rep1 1213.5880068989297 1213.58635490379 57.372 3 0.27605941985277327 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 56955 9360 LEDVRNGIYP True H1975_Epitope_Rep3 1174.59823722946 1174.5971499358602 41.003 2 0.27605444334179435 0.00036105427849320016 0.9438714419765777 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2', 'ENST00000486701.1_1_2:27663393-27664286:+|nuORF', 'nc|ENSG00000185189|Q9NSY0-2|NRBP2', 'ENST00000423469.6_1_8:144917834-144920143:-|nuORF', 'nc|ENSG00000185189|Q9NSY0-4|NRBP2', 'ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 101389 21343 SMVEDITGLRL True PC9_epitope_Rep5 1232.6434731697198 1232.6423699358602 87.154 2 0.2760495582186705 0.00036105427849320016 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 133277 9429 WEIENNPTVKA True H1975_Epitope_Rep2 1299.6459156978701 1299.6448099358602 41.236 2 0.27604215085910294 0.00036105427849320016 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 70444 19491 LYRLQFNEF True PC9_epitope_Rep4 1228.6240580544797 1228.62296993586 83.088 2 0.2760081278923559 0.00036105427849320016 0.9438714419765777 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 57693 7715 LENDQIESLR True H1975_Epitope_Rep1 1215.60953018915 1215.6084299358602 34.638 2 0.2759983333962195 0.00036105427849320016 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF'] 67621 5087 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 24.649 2 0.2759911290246303 0.00036105427849320016 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 117907 14840 VAQLEQVYIR True PC9_epitope_Rep1 1217.6768219033297 1217.67572993586 61.902 2 0.27598191317695897 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 74787 11186 NLNLEPFSEK True H1975_Epitope_Rep3 1189.5979028762897 1189.5968099358602 48.125 2 0.2759811917489285 0.00036105427849320016 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2'] 89860 18266 RFLNDPGHLLW True PC9_epitope_Rep6 1366.7146043943799 1366.71295490379 82.9 3 0.275957112905323 0.00036105427849320016 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 28440 14243 FSEFTGVWKY True H1975_Epitope_Rep2 1262.5971746002997 1262.5960699358602 59.935 2 0.2759398872009196 0.00036105427849320016 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 67588 9973 LTETIYKNYY True H1975_Epitope_Rep1 1306.64451871554 1306.64342993586 43.297 2 0.2759013983182518 0.00036105427849320016 0.9438714419765777 ['ENSG00000146834|ENST00000310512|MEPCE', 'nc|ENSG00000289690|Q7L2J0-2|MEPCE'] 11732 5977 DHHENKYLL True PC9_epitope_Rep2 1167.56727145435 1167.56563490379 28.377 3 0.275875478146929 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 67620 4991 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 24.283 2 0.2758657369686088 0.00036105427849320016 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 48883 3358 KETAEAYLGKK True NCI_RA007_Epitope_Rep2 1236.6714021697196 1236.66976490379 17.721 3 0.27586230179023874 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 22366 6638 ETEREYFNRY True H1975_Epitope_Rep1 1405.6262428824498 1405.62460490379 30.587 3 0.2757891799858743 0.00036105427849320016 0.9438714419765777 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 28864 9552 FTDQQKLIY True H1975_Epitope_Rep2 1154.5971746002997 1154.5960699358602 41.716 2 0.2756986962892604 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 113669 14362 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61225490379 63.15 3 0.27569703095091896 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 130956 17491 VVITEKGISDL True PC9_epitope_Rep5 1172.66525416012 1172.66414993586 72.282 2 0.27564602598229954 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 39357 8381 HLVDEPQNLIK True H1975_Epitope_Rep3 1304.7088503076 1304.7077499358602 37.221 2 0.2756310112695462 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 77260 21616 NYIPRFWTF True PC9_epitope_Rep2 1242.6185787512197 1242.61748993586 88.62 2 0.2756203673072943 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 33981 16705 GNFNYIEFTR True PC9_epitope_Rep6 1259.5934862021898 1259.5923899358602 76.731 2 0.2755705419860793 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 132717 19331 VYSFGFERL True PC9_epitope_Rep4 1116.56039516876 1116.55928993586 82.464 2 0.2754971789424638 0.00036105427849320016 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 63102 9586 LNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep2 1088.58998142532 1088.5888899358602 41.903 2 0.27549551917105586 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 140168 7377 YVTIIDAPGHR True H1975_Epitope_Rep1 1240.6564208119198 1240.65478490379 33.379 3 0.27548165873838937 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF'] 53568 6185 KVTEGSFVYK True NCI_RA007_Epitope_Rep2 1156.61282466444 1156.61172993586 28.665 2 0.27547226195517716 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 73892 5021 NHHLQETSF True PC9_epitope_Rep4 1111.50467119779 1111.50356993586 25.939 2 0.27543437006938803 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 87379 6165 QTDLHEHPLY True H1975_Epitope_Rep2 1251.58840082175 1251.58730993586 28.686 2 0.27542596915857287 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF', 'nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 65014 12688 LSDIGSGIRYL True H1975_Epitope_Rep2 1192.6451874218799 1192.6440899358602 53.905 2 0.27541814188610364 0.00036105427849320016 0.9438714419765777 ['ENSG00000213341|ENST00000370397|CHUK', 'CHUK|p.L222Ffs*11|1|0.17|ENSG00000213341|chr10:100219031-100219032|-/A|frameshift_variant'] 53781 21395 KYFGGVLEYF True PC9_epitope_Rep2 1221.6070110080097 1221.6059099358602 87.766 2 0.2754057921538697 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 77135 15559 NYAWVYYHL True NCI_RA007_Epitope_Rep1 1227.57129420563 1227.57018993586 64.607 2 0.2753617757068106 0.00036105427849320016 0.9438714419765777 ['ENSG00000119917|ENST00000371818|IFIT3'] 77351 20543 NYLHLDYNF True PC9_epitope_Rep5 1197.5454733806098 1197.54436993586 84.063 2 0.2753455340856289 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 63098 8940 LNNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1088.58998142532 1088.5888899358602 39.292 2 0.27534089352359353 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 114336 6532 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 30.036 2 0.2753386165056364 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 932 13296 [Acetylation]-ADSELQLVEQR True H1975_Epitope_Rep1 1328.65720897386 1328.65610993586 56.247 2 0.27532984285288864 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198931|P07741-2|APRT', 'ENST00000564858.1_1_16:88877682-88878307:-|nuORF', 'ENSG00000198931|ENST00000378364|APRT'] 70937 16651 MELQEIQLK True PC9_epitope_Rep5 1130.6005457285798 1130.59944993586 69.053 2 0.2753179101930479 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 136416 10765 YHFEEVQKL True PC9_epitope_Rep6 1191.5924235730297 1191.5907749037901 52.235 3 0.2753040138628134 0.00036105427849320016 0.9438714419765777 ['ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant'] 24181 18321 EYTPRSWNF True PC9_epitope_Rep3 1198.54072235334 1198.5396299358601 75.68 2 0.27528980597304636 0.00036105427849320016 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 44341 20172 IMLEALERV True PC9_epitope_Rep1 1072.59506642532 1072.59396993586 82.42 2 0.27528303896541256 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 135218 9345 YAYDGKDYL True NCI_RA007_Epitope_Rep4 1106.4920408254197 1106.49094993586 42.8 2 0.27528051695874833 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 12550 10081 DLDDAQRTLY True H1975_Epitope_Rep2 1208.5673310240002 1208.56622993586 43.769 2 0.2752752757507777 0.00036105427849320016 0.9438714419765777 ['ENSG00000227124|ENST00000652011|ZNF717', 'ENST00000491507.1_1_3:75765690-75790926:-|nuORF'] 57506 4516 LEKPAKYDDIK True NCI_RA007_Epitope_Rep2 1318.7132669817 1318.7116349037901 22.198 3 0.2752422166535027 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF', 'ENST00000432206.1_1_20:13373901-13374318:+|nuORF', 'ENST00000505218.1_1_5:159377718-159377781:-|nuORF', 'ENST00000424043.3_1_1:92580458-92580773:-|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 116484 7857 TYDKGYQF True NCI_RA007_Epitope_Rep5 1020.45526139388 1020.45416993586 36.918 2 0.2752067168026465 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 34280 11362 GPLQSVQVFGR True H1975_Epitope_Rep3 1186.6458561282197 1186.64474993586 48.815 2 0.27518431913813335 0.00036105427849320016 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 119119 6146 VEILANDQGNR True NCI_RA007_Epitope_Rep2 1227.6207635791898 1227.6196699358602 28.515 2 0.27517326521895363 0.00036105427849320016 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 89756 6647 REYWNEQSA True NCI_RA007_Epitope_Rep5 1181.51015050105 1181.50904993586 32.238 2 0.27517251287730043 0.00036105427849320016 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 48424 12787 KEEDVLKFLAA True H1975_Epitope_Rep1 1261.69180326113 1261.69070993586 54.248 2 0.27515702505779766 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 14322 10608 DTDHYFLRY True H1975_Epitope_Rep2 1228.5512870370399 1228.55018993586 45.827 2 0.27514430315587496 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 13926 17804 DRFFSEYEKL True PC9_epitope_Rep2 1332.6350166609998 1332.6333749037901 73.776 3 0.27512695903787615 0.00036105427849320016 0.9438714419765777 ['ENSG00000135932|ENST00000258418|CAB39'] 24069 15018 EYQKVWNLF True NCI_RA007_Epitope_Rep3 1225.6131590176099 1225.61206993586 66.537 2 0.2751178116753789 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 140424 19596 YYFEGIKQTF True PC9_epitope_Rep2 1294.6233893481397 1294.6222899358602 80.759 2 0.27510848705224156 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 105666 11161 SVFVETFVQK True NCI_RA007_Epitope_Rep3 1182.6284747285797 1182.62736993586 51.008 2 0.2750796032772703 0.00036105427849320016 0.9438714419765777 ['ENSG00000170786|ENST00000303749|SDR16C5', 'nc|ENSG00000170786|Q8N3Y7-2|SDR16C5', 'SDR16C5|p.E232Kfs*23|2|0.26|ENSG00000170786|chr8:56306692-56306692|C/-|frameshift_variant'] 30055 14698 FYLEGGFSKF True NCI_RA007_Epitope_Rep5 1193.57571087973 1193.57460993586 63.206 2 0.27506564041885195 0.00036105427849320016 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 139803 15365 YVDDIFLRV True H1975_Epitope_Rep2 1138.60225998074 1138.60116993586 64.26 2 0.27497627801929386 0.00036105427849320016 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF'] 87388 13890 QTDNIIYVY True H1975_Epitope_Rep3 1127.5498900547097 1127.5487899358602 58.737 2 0.27497607779957606 0.00036105427849320016 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF', 'IFT172|p.K94N|1|0.12|ENSG00000138002|chr2:27485032-27485032|C/G|missense_variant'] 84861 13875 QHQLIQEAL True PC9_epitope_Rep5 1078.5771078620598 1078.5760099358602 58.39 2 0.2749722783339283 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ACTN4|p.Q709H|1|0.35|ENSG00000130402|chr19:38725840-38725840|G/T|missense_variant'] 15567 6298 EATDAIGHLDR True NCI_RA007_Epitope_Rep2 1196.5785644140399 1196.57692490379 29.103 3 0.27496750926626545 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 138782 12959 YSDDNPYYNYY True H1975_Epitope_Rep1 1475.55174052951 1475.55064993586 54.922 2 0.2749584847969476 0.00036105427849320016 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 25527 8105 FEQEYTRVC True H1975_Epitope_Rep3 1173.5124590001699 1173.51136993586 36.152 2 0.2749579665378755 0.00036105427849320016 0.9438714419765777 ['ENSG00000126773|ENST00000406854|PCNX4', 'ENST00000483571.5_1_14:60582139-60592559:+|nuORF'] 23066 16991 EVLDSFLDLAR True H1975_Epitope_Rep1 1276.66631678928 1276.66520993586 70.779 2 0.2749164654022161 0.00036105427849320016 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 22225 13245 ETDLLDIRSEY True H1975_Epitope_Rep1 1352.64597526752 1352.64486993586 56.043 2 0.27490587050986415 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 53270 5014 KTIDMELVKRK True NCI_RA007_Epitope_Rep4 1359.7908061097498 1359.78916490379 25.77 3 0.27487065908462743 0.00036105427849320016 0.9438714419765777 ['ENSG00000105329|ENST00000221930|TGFB1'] 8641 16396 AVAQALEVIPR True PC9_epitope_Rep2 1165.68190728377 1165.68080993586 68.312 2 0.2748154726458975 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 67036 20487 LTAPEDVFSKL True PC9_epitope_Rep3 1218.6496040959798 1218.6485099358601 84.061 2 0.27478596013068624 0.00036105427849320016 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 42668 10173 IEVIEIM[Oxidation]TDR True H1975_Epitope_Rep1 1233.62748913285 1233.62638993586 44.07 2 0.2747697627061802 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 39356 8277 HLVDEPQNLIK True H1975_Epitope_Rep1 1304.7088503076 1304.7072149037901 36.771 3 0.2746821588873367 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 18595 6066 ELAEQELEK True H1975_Epitope_Rep3 1087.5397192938299 1087.5386299358602 28.343 2 0.27463656680380344 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 14837 10339 DYETATLSDIK True H1975_Epitope_Rep1 1254.5979624459399 1254.59686993586 44.716 2 0.2746269982944875 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 69478 8134 LVSESSDVLPK True NCI_RA007_Epitope_Rep2 1172.6288686514001 1172.6277699358602 36.273 2 0.2746050286339899 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 39114 9031 HLDEAQRLLY True H1975_Epitope_Rep2 1256.65133543148 1256.6496749037901 39.689 3 0.2745871305921436 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000256060|Q8IVP9-2|ZNF547', 'ENSG00000152433|ENST00000282282|ZNF547', 'ENST00000600421.1_1_19:57901368-57922291:+|nuORF', 'nc|ENSG00000188785|Q8NEK5|ZNF548', 'ENSG00000188785|ENST00000336128|ZNF548'] 22313 15837 ETEEDKFLLLY True H1975_Epitope_Rep3 1398.6918628307799 1398.69076993586 66.364 2 0.2745652160672283 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 59069 15002 LGDLYEEEMR True PC9_epitope_Rep3 1253.5598031154097 1253.5587099358602 62.832 2 0.27456509235126153 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 44530 18161 IPALDNFLDKL True H1975_Epitope_Rep1 1257.69688864157 1257.6957899358601 75.668 2 0.2745468194669805 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 41646 10139 IDIIPNPQER True H1975_Epitope_Rep3 1193.64043639461 1193.6393299358601 44.043 2 0.2745129903205958 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 94446 21489 RYFLPPYTF True PC9_epitope_Rep5 1202.6124307416196 1202.61132993586 87.691 2 0.2745069216688593 0.00036105427849320016 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 60744 4483 LKDDEVAQLKK True NCI_RA007_Epitope_Rep2 1285.7241660185698 1285.7225249037901 22.07 3 0.2744244315300367 0.00036105427849320016 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 93832 4816 RVEIM[Oxidation]EEESEQ True H1975_Epitope_Rep3 1393.60312485981 1393.6020299358602 23.651 2 0.2744073898479799 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101557|P54578-2|USP14', 'nc|ENSG00000101557|P54578-3|USP14', 'ENSG00000101557|ENST00000261601|USP14', 'ENST00000578942.5_1_18:210315-211281:+|nuORF'] 47230 17372 IYDPNLAFLRF True NCI_RA007_Epitope_Rep4 1367.7237720957498 1367.72266993586 75.231 2 0.27435608338087064 0.00036105427849320016 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 107130 16015 SYMLVNENRF True PC9_epitope_Rep4 1271.5968573304701 1271.59576993586 69.535 2 0.2743542443334982 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 73883 7125 NHHLQETSF True PC9_epitope_Rep1 1111.50467119779 1111.50356993586 32.216 2 0.2743537976252243 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 48554 6409 KEGKPPISVKF True H1975_Epitope_Rep2 1228.7179584393195 1228.7163149037901 29.576 3 0.27434543882393037 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 30054 14547 FYLEGGFSKF True NCI_RA007_Epitope_Rep4 1193.57571087973 1193.57460993586 63.332 2 0.2743201255474242 0.00036105427849320016 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 105893 19937 SVLDDNKLLTL True PC9_epitope_Rep4 1229.68671788069 1229.68562993586 84.823 2 0.2743140135432159 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 132409 19468 VYNEQIRDLL True PC9_epitope_Rep5 1261.6666511424498 1261.66554993586 79.936 2 0.2743017168998453 0.00036105427849320016 0.9438714419765777 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF', 'KIF18A|p.R666Kfs*29|1|0.22|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant'] 132835 19392 VYTLLTTHL True PC9_epitope_Rep2 1059.5964463243101 1059.5953499358602 79.969 2 0.2742765837097758 0.00036105427849320016 0.9438714419765777 ['KDM2A-C11orf80|3|fusion', 'KDM2A-C11orf80|2|fusion', 'KDM2A-C11orf80|1|fusion', 'nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 136004 14759 YFINRSWEW True NCI_RA007_Epitope_Rep3 1299.6036569630699 1299.60254993586 65.468 2 0.2742164691848488 0.00036105427849320016 0.9438714419765777 ['ENSG00000064763|ENST00000536681|FAR2', 'nc|ENSG00000064763|Q96K12-2|FAR2'] 104874 12723 STESMDFLKY True H1975_Epitope_Rep2 1219.5430904221098 1219.54198993586 54.041 2 0.27421430967854227 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 7124 5652 AQYEEIAQRS True NCI_RA007_Epitope_Rep5 1193.5676653771698 1193.5665699358601 28.428 2 0.2742117883586742 0.00036105427849320016 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6C|p.R349Q|1|0.16|ENSG00000170465|chr12:52471163-52471163|C/T|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 138917 10303 YSEDLSDMHY True H1975_Epitope_Rep2 1258.48121844154 1258.48012993586 44.637 2 0.2741909616778799 0.00036105427849320016 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 61416 5006 LLEQYKEESK True NCI_RA007_Epitope_Rep1 1265.6503323719696 1265.6486849037901 23.556 3 0.2741771125109306 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 2318 5589 AEQAERYDEM True H1975_Epitope_Rep2 1240.50301651528 1240.50190993586 26.5 2 0.2740800467278883 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 116206 20457 TVTSDLLQV True PC9_epitope_Rep3 974.5284263341399 974.5273299358599 83.943 2 0.27406652432654216 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 96856 3822 SESPKEPEQLR True NCI_RA007_Epitope_Rep4 1298.64664397386 1298.6449949037901 20.89 3 0.2740011598356509 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 110501 17061 TIQEEFYRV True PC9_epitope_Rep5 1183.5873381925899 1183.58624993586 70.644 2 0.2739915092702536 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 103875 8321 SRLEQEIATYR True NCI_RA007_Epitope_Rep5 1364.7048275563197 1364.70319490379 38.683 3 0.2739658097982503 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001'] 140691 8409 YYQDTPKQI True PC9_epitope_Rep2 1154.5607890915799 1154.5596899358602 37.716 2 0.2739066851603294 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 113010 7527 TPTLVEVSR True NCI_RA007_Epitope_Rep4 1000.55530978832 1000.55420993586 35.597 2 0.27386124380788024 0.00036105427849320016 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 22319 11967 ETEEGIYWRY True H1975_Epitope_Rep3 1344.5986311522797 1344.5975299358602 51.189 2 0.27385126775630647 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131650|Q8NCW0-6|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-4|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-3|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-5|KREMEN2', 'nc|ENSG00000131650|Q8NCW0-2|KREMEN2', 'ENSG00000131650|ENST00000303746|KREMEN2'] 137146 10691 YLDNVIGHSY True H1975_Epitope_Rep3 1179.55603806431 1179.5549499358601 46.198 2 0.27381372736920934 0.00036105427849320016 0.9438714419765777 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'TRMT6|p.L275Ffs*10|1|0.1|ENSG00000089195|chr20:5942625-5942629|AAGAT/-|frameshift_variant', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 47452 19401 IYISTLKTEF True PC9_epitope_Rep2 1213.6594405036901 1213.65834993586 80.004 2 0.27374886877531696 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 76365 14083 NSFVNDIFER True NCI_RA007_Epitope_Rep1 1239.5884008217497 1239.58730993586 58.809 2 0.2737420160490543 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 16935 9860 EGEFVAQFK True NCI_RA007_Epitope_Rep2 1053.5131106231697 1053.51200993586 42.979 2 0.2737123468510561 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 119121 5749 VEILANDQGNR True NCI_RA007_Epitope_Rep4 1227.6207635791898 1227.6196699358602 28.733 2 0.27364830207645585 0.00036105427849320016 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 59061 7617 LGDLYEEEM[Oxidation]R True H1975_Epitope_Rep1 1269.55471811541 1269.55362993586 34.287 2 0.2735657977215039 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 94389 8749 RYFDPANGKF True NCI_RA007_Epitope_Rep4 1213.5880068989297 1213.5869099358601 40.45 2 0.273554150746023 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 137195 8221 YLDYHMEKY True H1975_Epitope_Rep1 1260.5485101557201 1260.54685490379 36.565 3 0.27354054102113634 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 102941 20302 SQINKFLYL True PC9_epitope_Rep1 1124.62299542532 1124.62188993586 82.92 2 0.27352353058752604 0.00036105427849320016 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 85368 11116 QLDVAGRVMQY True H1975_Epitope_Rep2 1278.6390564956198 1278.6379499358602 47.793 2 0.27349652662785207 0.00036105427849320016 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 90920 13942 RLEIEPEWAY True H1975_Epitope_Rep2 1304.64010204144 1304.63900993586 58.776 2 0.2734740976756002 0.00036105427849320016 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 120367 21352 VFRLQFDEF True PC9_epitope_Rep3 1199.5975089534697 1199.59640993586 87.427 2 0.2734731932336312 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11', 'nc|ENSG00000166167|Q9Y297-2|BTRC', 'ENSG00000166167|ENST00000370187|BTRC'] 63213 5395 LNVTEQEKIDK True NCI_RA007_Epitope_Rep2 1315.69834519355 1315.69669490379 25.604 3 0.2734584894757931 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 14225 4979 DSYESYGNSR True NCI_RA007_Epitope_Rep2 1176.4683452587199 1176.46724993586 23.99 2 0.2734466973329138 0.00036105427849320016 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 27334 6660 FM[Oxidation]EKETPLRY True H1975_Epitope_Rep2 1328.6434735501598 1328.6418149037902 30.526 3 0.2734226846177323 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1'] 89008 11073 REEDFYYTEV True H1975_Epitope_Rep2 1349.5775613545297 1349.5764699358601 47.625 2 0.27341482681532747 0.00036105427849320016 0.9438714419765777 ['ENSG00000186918|ENST00000344423|ZNF395'] 32220 20903 GFGFVTFDDHD True PC9_epitope_Rep1 1255.51456717515 1255.51346993586 85.225 2 0.2733777230906272 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 139452 6467 YTETEPYHNY True H1975_Epitope_Rep3 1315.5356965425499 1315.5345899358601 29.847 2 0.2733744118349579 0.00036105427849320016 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 14198 16052 DSTLIM[Oxidation]QLLR True H1975_Epitope_Rep3 1204.6485589305998 1204.64746993586 67.201 2 0.27334476373133165 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 69842 13754 LYADVGGKQF True PC9_epitope_Rep5 1096.55530978832 1096.5542099358602 57.927 2 0.27333016302127194 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 22304 14809 ETEEDKFLLL True H1975_Epitope_Rep3 1235.6285342982299 1235.6274299358602 62.343 2 0.27329577414904727 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 9872 19816 AYMPHTFFI True PC9_epitope_Rep4 1125.53173789277 1125.53064993586 84.35 2 0.2732595214436224 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 134893 11421 YADNQVMHFY True H1975_Epitope_Rep1 1286.5390081011801 1286.5379099358602 48.911 2 0.27320271922793826 0.00036105427849320016 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 70060 16873 LYHDIFSRL True PC9_epitope_Rep4 1162.61349337078 1162.6118549037901 72.883 3 0.2731980331314405 0.00036105427849320016 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 72421 7723 MTERQDLVY True H1975_Epitope_Rep2 1153.5437591284497 1153.5426699358602 34.658 2 0.27318216672824813 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5'] 89729 9679 REYQELMSV True NCI_RA007_Epitope_Rep3 1153.54375912845 1153.5426699358602 45.149 2 0.2731190798209531 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 135786 8212 YENEVALRQ True PC9_epitope_Rep5 1120.5512870370399 1120.55018993586 36.527 2 0.27311817404573074 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 88231 14516 QYDPYTDSRF True PC9_epitope_Rep5 1290.55168095986 1290.5505899358602 60.835 2 0.27298919159679136 0.00036105427849320016 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 130675 10112 VVDEDHELIY True H1975_Epitope_Rep2 1230.5768330785402 1230.5757299358602 43.892 2 0.2729766099196331 0.00036105427849320016 0.9438714419765777 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 98036 10397 [Acetylation]-SHTILLVQPTK True NCI_RA007_Epitope_Rep1 1277.7343370957499 1277.7332299358602 44.424 2 0.27294994063157474 0.00036105427849320016 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 67407 7257 LTEAGDYTAKY True H1975_Epitope_Rep2 1230.57683307854 1230.5757299358602 32.848 2 0.27292791789251036 0.00036105427849320016 0.9438714419765777 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 56139 11319 LDM[Oxidation]DSIIAEVK True NCI_RA007_Epitope_Rep2 1248.6271547796798 1248.62604993586 48.618 2 0.27291385225509346 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 54434 9286 KYTKIFNDF True NCI_RA007_Epitope_Rep3 1174.60225998074 1174.60116993586 43.632 2 0.2729032601364567 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 41120 20421 HYNSDLNNLLF True PC9_epitope_Rep2 1348.6411646706 1348.64006993586 83.976 2 0.27289560130004137 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 89856 20697 RFLNDPGHLLW True PC9_epitope_Rep3 1366.7146043943799 1366.71295490379 84.885 3 0.2728730151695446 0.00036105427849320016 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 48669 7922 KELEPLKEMTA True H1975_Epitope_Rep3 1287.67443894483 1287.6733499358602 35.441 2 0.2728667614376053 0.00036105427849320016 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A'] 14952 10069 DYQALRTSI True NCI_RA007_Epitope_Rep5 1065.54547338061 1065.54436993586 45.367 2 0.2728653035178999 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 64107 10418 LQEEIDALESR True NCI_RA007_Epitope_Rep1 1301.6463096206899 1301.64520993586 44.507 2 0.2728652318505412 0.00036105427849320016 0.9438714419765777 ['ENSG00000101132|ENST00000371419|PFDN4', 'ENST00000487129.1_1_20:52825073-52835686:+|nuORF'] 69483 7649 LVSESSDVLPK True NCI_RA007_Epitope_Rep5 1172.6288686514001 1172.6277699358602 36.124 2 0.27285684900282964 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 106837 21904 SYIDLLQRF True PC9_epitope_Rep1 1153.6131590176099 1153.61206993586 89.068 2 0.27282179469589257 0.00036105427849320016 0.9438714419765777 ['ENSG00000127580|ENST00000293883|WDR24'] 64040 8766 LQDGEFSM[Oxidation]DLR True H1975_Epitope_Rep1 1325.59216625329 1325.59106993586 38.648 2 0.2728149986210037 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 53591 5767 KVVEGSFVYK True NCI_RA007_Epitope_Rep3 1154.6335601090198 1154.63191490379 29.666 3 0.2728145833048696 0.00036105427849320016 0.9438714419765777 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 14300 8627 DTDAQQAFKY True H1975_Epitope_Rep2 1185.5302172392899 1185.52912993586 38.14 2 0.2727813736429582 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 65030 10300 LSDIVIEKY True H1975_Epitope_Rep3 1078.5910265907 1078.58992993586 44.672 2 0.2727731404456306 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'nc|ENSG00000184465|A2RRH5-3|WDR27', 'ENST00000546953.1_1_6:170072345-170089107:-|nuORF'] 33916 8181 GM[Oxidation]DVELTVEER True NCI_RA007_Epitope_Rep2 1292.59183190012 1292.59072993586 36.458 2 0.2727533584116577 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 140727 14441 YYQHIVTTL True PC9_epitope_Rep2 1136.5866099166 1136.58550993586 60.816 2 0.27273245604634916 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 9587 20327 AYDTVRWEF True PC9_epitope_Rep1 1185.5454733806098 1185.54436993586 83.018 2 0.2726994141669735 0.00036105427849320016 0.9438714419765777 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 67194 11846 LTDIFQHDTY True H1975_Epitope_Rep2 1251.57716743171 1251.57606993586 50.644 2 0.27263243302764384 0.00036105427849320016 0.9438714419765777 ['ENSG00000164366|ENST00000296824|CCDC127'] 72286 4379 MSEDKPQDY True H1975_Epitope_Rep2 1111.44919003727 1111.44808993586 21.955 2 0.27261779359409866 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 84047 5756 QEQAQTTDWRA True H1975_Epitope_Rep2 1332.60584179104 1332.6047499358601 27.137 2 0.2725660115398422 0.00036105427849320016 0.9438714419765777 ['ENSG00000123739|ENST00000243501|PLA2G12A'] 107124 17642 SYMLVNENRF True PC9_epitope_Rep1 1271.5968573304701 1271.59576993586 72.653 2 0.2725443100572226 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 70714 9861 [Acetylation]-M[Oxidation]DSTLTASEIR True H1975_Epitope_Rep3 1280.59183221642 1280.59072993586 42.961 2 0.27253413849550495 0.00036105427849320016 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 61460 20773 LLFEGEKITI True PC9_epitope_Rep5 1161.6645258841297 1161.6634299358602 84.954 2 0.27251977277995826 0.00036105427849320016 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000168255|ENST00000513506|POLR2J3'] 129189 12486 VTDGAILGKLY True H1975_Epitope_Rep2 1148.6441247927198 1148.64302993586 53.118 2 0.27251341050659034 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant'] 137189 9374 YLDYDDTRY True H1975_Epitope_Rep1 1222.51423282198 1222.5131299358602 40.966 2 0.2724957822664751 0.00036105427849320016 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000535343.5_1_12:132632219-132636084:+|nuORF', 'NOC4L-STAB2|1|fusion'] 93597 5654 RSYHLQIVTK True NCI_RA007_Epitope_Rep4 1243.7037053575098 1243.70206490379 28.354 3 0.27246077532186924 0.00036105427849320016 0.9438714419765777 ['ENSG00000131203|ENST00000518237|IDO1'] 45027 16184 IQLVEEELDR True PC9_epitope_Rep5 1242.6455813446998 1242.64448993586 67.241 2 0.27246067651936284 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 32959 6247 GISQEQM[Oxidation]NEFR True NCI_RA007_Epitope_Rep2 1353.59831426289 1353.59720993586 28.904 2 0.27242942365485956 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 48881 10070 KESYSVYVYK True PC9_epitope_Rep3 1264.6339540318397 1264.63231490379 43.688 3 0.2724064328717923 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 119359 13043 VENIQVFDFK True H1975_Epitope_Rep1 1237.6342883850095 1237.6331899358602 55.255 2 0.2724005470271342 0.00036105427849320016 0.9438714419765777 ['ENSG00000198074|ENST00000359579|AKR1B10', 'nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000227471|ENST00000457545|AKR1B15'] 104818 7037 STDVSQPPHVY True H1975_Epitope_Rep2 1228.5724164044402 1228.5713099358602 31.992 2 0.2723996189154049 0.00036105427849320016 0.9438714419765777 ['KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion', 'ENSG00000086200|ENST00000325324|IPO11', 'nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENST00000502862.1_1_5:61811283-61822085:+|nuORF'] 15901 7268 EDQTEYLEER True NCI_RA007_Epitope_Rep2 1310.5626395663799 1310.56154993586 32.892 2 0.2723861261328464 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 94095 4127 RVYGGLTTK True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 22.16 2 0.27237493065156004 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 99398 10797 SLEDQVEM[Oxidation]LR True H1975_Epitope_Rep1 1234.58635259686 1234.58524993586 46.494 2 0.2723734183615858 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 28962 9101 FTETELKTTDY True H1975_Epitope_Rep2 1346.6241771937798 1346.6230899358602 39.959 2 0.27236599941441914 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 77315 12880 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.6069699358602 54.841 2 0.27236315026755725 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 22198 13646 ETDEKDFYLYY True H1975_Epitope_Rep3 1484.6347418774799 1484.6336499358601 57.78 2 0.27233724906192747 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 107123 17541 SYMLVNENRF True PC9_epitope_Rep1 1271.5968573304701 1271.59576993586 72.265 2 0.2723089946565935 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 49002 16247 KFIDPIYQVW True NCI_RA007_Epitope_Rep4 1307.69140933831 1307.6903099358601 70.461 2 0.2723002968730646 0.00036105427849320016 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 101713 6039 SPGLQKEAV True PC9_epitope_Rep5 927.5025459394699 927.50144993586 28.222 2 0.2722931478942174 0.00036105427849320016 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 116789 22687 TYLPREILNLI True PC9_epitope_Rep5 1343.7812869718698 1343.78018993586 92.269 2 0.2722896103054426 0.00036105427849320016 0.9438714419765777 ['ENSG00000163428|ENST00000295628|LRRC58'] 139450 6529 YTETEPYHNY True H1975_Epitope_Rep2 1315.5356965425499 1315.5345899358601 30.027 2 0.27228702125220083 0.00036105427849320016 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 94401 13880 RYFDPANGKF True PC9_epitope_Rep3 1213.5880068989297 1213.5869099358601 58.47 2 0.2722477740811799 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 4769 9308 ALEEQLQQIR True H1975_Epitope_Rep2 1226.6619001151798 1226.66080993586 40.762 2 0.2722289735050026 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 137565 5570 YLSEVASGDNK True NCI_RA007_Epitope_Rep2 1181.5564319871298 1181.55532993586 26.281 2 0.272204128654701 0.00036105427849320016 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF'] 96749 9284 SEQLDLPVRQA True H1975_Epitope_Rep2 1254.65681473474 1254.6557099358602 40.668 2 0.27219219591737165 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF'] 125456 6374 VLTVINQTQK True NCI_RA007_Epitope_Rep5 1142.66592286646 1142.66482993586 31.191 2 0.2721907169458374 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 109041 12445 TEYSFLKEV True NCI_RA007_Epitope_Rep5 1114.55464108198 1114.55354993586 54.527 2 0.2721806912655905 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 61224 9593 LLDPSQKNLY True H1975_Epitope_Rep3 1189.63428838501 1189.6331899358602 41.913 2 0.2721724346530701 0.00036105427849320016 0.9438714419765777 ['ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000277462|ENST00000366503|ZNF670'] 124278 10118 VLDEAFQRY True H1975_Epitope_Rep2 1139.56112344475 1139.56002993586 43.915 2 0.2721531271995746 0.00036105427849320016 0.9438714419765777 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000563908.1_1_15:72647792-72668286:-|nuORF', 'ENST00000569509.5_1_15:72643558-72668681:-|nuORF', 'HEXA-BBS4|1|fusion'] 61127 13751 LLDEAQRLLY True H1975_Epitope_Rep2 1232.67648755016 1232.67538993586 58.038 2 0.2721509032164371 0.00036105427849320016 0.9438714419765777 ['ENSG00000083817|ENST00000196489|ZNF416', 'ENSG00000197128|ENST00000356584|ZNF772', 'ENSG00000171649|ENST00000597850|ZIK1', 'nc|ENSG00000197128|Q68DY9|ZNF772', 'ENSG00000180884|ENST00000404801|ZNF792'] 135425 10285 YDSYLGDDYVR True H1975_Epitope_Rep1 1364.5884603913998 1364.5873699358601 44.506 2 0.2721350475338349 0.00036105427849320016 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 60269 9328 LIEEVM[Oxidation]IGEDK True H1975_Epitope_Rep1 1290.6377194633799 1290.6366299358601 40.787 2 0.27211190883357284 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2'] 76550 10717 NTDPWAGYRY True H1975_Epitope_Rep1 1241.5465360097699 1241.54542993586 46.184 2 0.27206125466188297 0.00036105427849320016 0.9438714419765777 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 75990 14227 NRIEELNQSL True PC9_epitope_Rep5 1214.62551460646 1214.62440993586 59.73 2 0.27204146506002064 0.00036105427849320016 0.9438714419765777 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L', 'ENST00000543152.5_1_16:19590306-19619547:+|nuORF'] 52748 19442 KQMEQISQFL True PC9_epitope_Rep1 1250.6329084860197 1250.63180993586 79.598 2 0.2720343428578885 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 116758 11805 TYLEKAIKI True PC9_epitope_Rep6 1077.6433965167298 1077.6422899358602 56.599 2 0.2719924166946358 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 57145 7582 LEEQSRLIAA True H1975_Epitope_Rep3 1128.6138872935999 1128.61278993586 34.145 2 0.27196622074271065 0.00036105427849320016 0.9438714419765777 ['ENSG00000157500|ENST00000288266|APPL1'] 131875 18820 VYDPSLKTLL True PC9_epitope_Rep4 1147.64887581999 1147.6477699358602 80.476 2 0.27194527550954084 0.00036105427849320016 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 53124 7948 KSIDFPLTK True NCI_RA007_Epitope_Rep4 1047.59644632431 1047.5953499358602 37.318 2 0.27193649563309735 0.00036105427849320016 0.9438714419765777 ['ENSG00000084073|ENST00000372759|ZMPSTE24'] 28443 12015 FSEIDLEKY True H1975_Epitope_Rep2 1142.54955570154 1142.5484499358602 51.295 2 0.2719089231407626 0.00036105427849320016 0.9438714419765777 ['ENSG00000178700|ENST00000314636|DHFR2'] 108718 3864 TEM[Oxidation]NGRIVAT True H1975_Epitope_Rep2 1106.5390084816197 1106.5379099358602 19.899 2 0.2718968309093098 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 73414 12583 NESFGFTADLR True NCI_RA007_Epitope_Rep1 1255.5833154413099 1255.5822099358602 52.925 2 0.27187336039450155 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 54446 12860 KYTKIFNDF True PC9_epitope_Rep6 1174.60225998074 1174.60116993586 60.982 2 0.27187155739550695 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 140744 17922 YYQNYFEKL True PC9_epitope_Rep4 1266.5920892198599 1266.59098993586 76.986 2 0.27185717208081644 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 91289 19466 RLYDGLFKVI True PC9_epitope_Rep4 1222.70739375562 1222.70575490379 82.993 3 0.2718442542639121 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 92282 18550 RQLEEEGITFV True PC9_epitope_Rep5 1319.6721304457096 1319.6710299358601 76.375 2 0.2718209394679189 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 132132 6998 VYISEHEHF True NCI_RA007_Epitope_Rep4 1159.5298233164701 1159.5281849037901 33.543 3 0.2718192774320881 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 114804 15492 TTDDWKDFLY True H1975_Epitope_Rep3 1302.57683307854 1302.5757299358602 65.007 2 0.2718063556837631 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 67490 12606 LTEKELLLY True H1975_Epitope_Rep3 1120.63797678312 1120.6368699358602 53.694 2 0.27175750760972633 0.00036105427849320016 0.9438714419765777 ['ENSG00000101400|ENST00000217381|SNTA1'] 48443 6805 KEEELQAALAR True NCI_RA007_Epitope_Rep1 1256.67246479888 1256.6708249037902 30.478 3 0.2717440834072654 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH11|p.K1088del|1|0.12|ENSG00000133392|chr16:15737478-15737480|CTT/-|inframe_deletion', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 135252 19406 YAYDGKDYLAL True PC9_epitope_Rep1 1290.6132185872598 1290.6121299358601 79.455 2 0.27174298395548935 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 12848 19142 DLLDLLVEAK True H1975_Epitope_Rep1 1127.64379043955 1127.64268993586 79.777 2 0.27174202911230944 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 12413 7263 DKGEYTLVVK True NCI_RA007_Epitope_Rep1 1150.6233893481399 1150.6217549037901 32.242 3 0.2717121176016987 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF', 'FLNA|p.W2632R|2|0.45|ENSG00000196924|chrX:154348899-154348899|A/T|missense_variant'] 28925 7196 FTENDKEYQEY True H1975_Epitope_Rep1 1464.6045043783597 1464.60340993586 32.696 2 0.2717011032948336 0.00036105427849320016 0.9438714419765777 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 125810 6719 VNLPINGNGKQ True NCI_RA007_Epitope_Rep5 1152.62512068364 1152.62402993586 32.517 2 0.27168200041700885 0.00036105427849320016 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 86479 18466 QQVQRLPFL True PC9_epitope_Rep4 1127.64512785223 1127.64402993586 79.099 2 0.27168097030847094 0.00036105427849320016 0.9438714419765777 ['ENSG00000132963|ENST00000380842|POMP'] 90907 5507 RLDTDHLRY True H1975_Epitope_Rep3 1187.60471959223 1187.60308490379 26.234 3 0.2716591244089296 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1'] 59067 10161 LGDLYEEEMR True NCI_RA007_Epitope_Rep2 1253.5598031154097 1253.5587099358602 44.112 2 0.27163831990481885 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 94388 8298 RYFDPANGKF True NCI_RA007_Epitope_Rep3 1213.5880068989297 1213.58635490379 39.76 3 0.2715978978039101 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 46223 9340 ITDPDPDIRY True H1975_Epitope_Rep3 1203.57716743171 1203.57606993586 40.926 2 0.27157924084841056 0.00036105427849320016 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 54319 19787 KYPSPFFVF True PC9_epitope_Rep6 1130.5800679841798 1130.5789699358602 88.766 2 0.27157679842919386 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 70277 19290 LYPDHFHLL True PC9_epitope_Rep1 1153.59202965021 1153.59092993586 79.002 2 0.2715717691806068 0.00036105427849320016 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 71707 5072 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 24.591 2 0.2715477760119172 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 4700 12408 ALDLEIATYR True NCI_RA007_Epitope_Rep2 1163.6186383208699 1163.61754993586 52.872 2 0.271485903892704 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 14308 11044 DTDEYVLKY True H1975_Epitope_Rep1 1144.52882025696 1144.5277299358602 47.443 2 0.27148456415665384 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1'] 101803 13023 SPIENIQRVA True PC9_epitope_Rep3 1125.6142216467701 1125.6131299358601 55.121 2 0.27148314564923376 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 132135 6833 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5281849037901 32.968 3 0.271456651599632 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 135194 16234 YAVEGRDLTL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 67.689 2 0.2714241354631512 0.00036105427849320016 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 117060 20412 TYQRWQFTL True PC9_epitope_Rep1 1241.61930702721 1241.61820993586 83.327 2 0.27142217376074357 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 97082 11458 SEYMRNGDFLP True H1975_Epitope_Rep3 1327.5866865695898 1327.58558993586 49.192 2 0.2714151157598417 0.00036105427849320016 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'ENST00000462970.5_1_1:151227258-151237442:+|nuORF', 'ENST00000461434.1_1_1:151227258-151234901:+|nuORF'] 95021 14176 RYQQWMERF True PC9_epitope_Rep4 1342.6240751378198 1342.62241490379 62.431 3 0.27139547545815085 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 52751 19443 KQMEQISQFL True PC9_epitope_Rep3 1250.6329084860197 1250.63180993586 80.013 2 0.27137510792111696 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 11835 16097 DHMRFISEL True PC9_epitope_Rep4 1146.54917886206 1146.5480899358602 69.853 2 0.27137153191300417 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 22195 13764 ETDEKDFYLYY True H1975_Epitope_Rep2 1484.6347418774799 1484.6336499358601 58.088 2 0.2713437207886383 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 94704 7944 RYLEQLHQL True NCI_RA007_Epitope_Rep3 1198.64585612822 1198.64422490379 38.355 3 0.2713175250105141 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 28455 15560 FSEPDFVAKFY True H1975_Epitope_Rep3 1348.63395403184 1348.6328499358601 65.269 2 0.27131419871911006 0.00036105427849320016 0.9438714419765777 ['ENSG00000179933|ENST00000319074|C14orf119'] 29803 11128 FVTNDAATILR True NCI_RA007_Epitope_Rep2 1219.65608645875 1219.6549899358602 47.866 2 0.2713138504655766 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 137148 12408 YLDPAQQNLY True H1975_Epitope_Rep2 1223.5822528121503 1223.5811499358601 52.813 2 0.27128845881321717 0.00036105427849320016 0.9438714419765777 ['ENST00000421406.1_1_1:247353282-247372753:-|nuORF'] 14266 5146 DSYVGDEAQSK True PC9_epitope_Rep3 1197.51496109797 1197.5138699358602 24.879 2 0.2712809833426588 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 72407 15099 MTELPAPLSY True H1975_Epitope_Rep2 1120.5474475265598 1120.54634993586 63.232 2 0.27126314737775503 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 24827 11103 FDAGELITQR True H1975_Epitope_Rep1 1148.5825871653199 1148.5814899358602 47.672 2 0.2712626338116803 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 107341 5142 SYRQSSATSSF True NCI_RA007_Epitope_Rep5 1219.5469299325898 1219.5458299358602 26.474 2 0.27124090772307446 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 118806 10920 VEEEHLWEC True H1975_Epitope_Rep2 1172.48082451872 1172.4797299358602 47.034 2 0.2712340155573836 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000147130|Q14202-2|ZMYM3', 'ENSG00000147130|ENST00000314425|ZMYM3'] 67122 11528 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 49.402 2 0.2712111311578778 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 65166 14337 LSDTKYLEMIY True H1975_Epitope_Rep1 1374.6741045916601 1374.6730099358601 60.337 2 0.27120982150922207 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 73911 16884 NHIEPLKIQL True PC9_epitope_Rep1 1203.6975573479099 1203.69646993586 69.768 2 0.2711960720857069 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 22061 5121 ESSAGGSFTVR True NCI_RA007_Epitope_Rep3 1096.51490152832 1096.51380993586 27.137 2 0.271189031668712 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000436135.1_1_1:158493653-158493989:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 134809 19056 WYQTKFETL True PC9_epitope_Rep1 1214.5971746002997 1214.5966749679299 78.09 1 0.27116894859459945 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 87689 13020 QVDPLSALKY True H1975_Epitope_Rep1 1132.6128246644398 1132.61172993586 55.164 2 0.2711351132657642 0.00036105427849320016 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 44395 10498 INEILSNALK True H1975_Epitope_Rep3 1113.63937376545 1113.63826993586 45.443 2 0.27111749351351216 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 113674 16135 TRDELEWKL True PC9_epitope_Rep5 1188.6138872935999 1188.61225490379 67.054 3 0.271112822133913 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 17775 5736 EHVKEVQQL True PC9_epitope_Rep5 1108.58767254576 1108.58656993586 27.057 2 0.27110143697005934 0.00036105427849320016 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 49029 9393 KFIDTTSKF True PC9_epitope_Rep4 1085.57571087973 1085.57460993586 43.738 2 0.2710719140812892 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 101818 11502 SPIENIQRVAA True PC9_epitope_Rep6 1196.6513354314802 1196.6502299358601 55.32 2 0.27105944930302567 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 54316 21947 KYPSPFFVF True PC9_epitope_Rep5 1130.5800679841798 1130.5789699358602 89.462 2 0.27105645130547223 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 53748 12829 KYFDEHYEY True PC9_epitope_Rep1 1292.53496826656 1292.53333490379 54.221 3 0.271023486418846 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 115401 5575 TVEVAEGEAVR True H1975_Epitope_Rep3 1158.5880664685799 1158.58696993586 26.486 2 0.27100702635569085 0.00036105427849320016 0.9438714419765777 ['ENSG00000147649|ENST00000336273|MTDH'] 140685 10760 YYPTEDVPR True PC9_epitope_Rep5 1138.5294889632999 1138.52838993586 46.381 2 0.2709942791085547 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 89027 7732 REEEEKLLHLA True H1975_Epitope_Rep3 1365.7252286477299 1365.72358490379 34.724 3 0.27096405905510035 0.00036105427849320016 0.9438714419765777 ['ENSG00000096401|ENST00000371477|CDC5L'] 53855 9191 KYGRIVEVL True NCI_RA007_Epitope_Rep4 1075.6389798426299 1075.6378899358601 42.197 2 0.2709182052937364 0.00036105427849320016 0.9438714419765777 ['RBMXL2|p.G376Efs*4|1|0.33|ENSG00000170748|chr11:7090246-7090246|G/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'RBMX|p.M40I|2|0.14|ENSG00000147274|chrX:136879113-136879113|C/T|missense_variant', 'ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'nc|ENSG00000147274|P38159-3|RBMX'] 56664 6846 LEAAIADAEQR True H1975_Epitope_Rep3 1185.59896550545 1185.5978699358602 31.291 2 0.2709145651229994 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 27525 9637 FPGQLNADLR True H1975_Epitope_Rep1 1129.5880068989297 1129.5869099358601 41.997 2 0.27089091277959026 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'TUBB6|p.R241C|1|0.58|ENSG00000176014|chr18:12325510-12325510|C/T|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 140688 9140 YYQDTPKQI True PC9_epitope_Rep1 1154.5607890915799 1154.5596899358602 40.007 2 0.2708643735451417 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 40873 7267 HVLVTLGEK True PC9_epitope_Rep2 994.58113061334 994.58002993586 33.34 2 0.2708464448942792 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 72424 5969 MTESYEQEKY True H1975_Epitope_Rep2 1306.5387333176598 1306.5376299358602 27.941 2 0.2708250569395688 0.00036105427849320016 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 23467 10637 EVYELLDSPGK True H1975_Epitope_Rep3 1248.6237832709596 1248.62268993586 45.988 2 0.27078694963621475 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 65079 15480 LSDLLDWKY True H1975_Epitope_Rep2 1151.58627556343 1151.5851699358602 64.7 2 0.27077889729523 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 71966 15115 MPWGDPNYRSA True PC9_epitope_Rep1 1292.5608061749201 1292.5597099358602 62.958 2 0.2707306755036865 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 72827 18992 NALDKVLSV True PC9_epitope_Rep3 957.54949613189 957.54838993586 78.275 2 0.27070943700161865 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8', 'NARS2-ALG8|2|fusion', 'NARS2-ALG8|1|fusion', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 13805 7555 DQVANSAFVER True NCI_RA007_Epitope_Rep2 1234.59421447818 1234.5931099358602 34.013 2 0.27066870450439207 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 107339 4986 SYRQSSATSSF True NCI_RA007_Epitope_Rep3 1219.5469299325898 1219.5458299358602 26.61 2 0.27062418939551547 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 135196 15530 YAVEGRDLTL True PC9_epitope_Rep4 1135.5873381925899 1135.58624993586 67.66 2 0.2705988134756078 0.00036105427849320016 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 11378 6226 DFHVDEQTTVK True H1975_Epitope_Rep1 1317.62009487285 1317.61843490379 29.016 3 0.27057082650734315 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 70445 20548 LYRLQFNEF True PC9_epitope_Rep5 1228.6240580544797 1228.62296993586 84.082 2 0.27055953662553933 0.00036105427849320016 0.9438714419765777 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 28662 15488 FSSPHLVQV True PC9_epitope_Rep5 1012.5341804209198 1012.53308993586 64.584 2 0.270525399017899 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 101612 9879 SPFEVYVDK True H1975_Epitope_Rep1 1082.5284263341398 1082.52732993586 42.934 2 0.2705115007637468 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 39927 16003 HQLTEVGTMNI True PC9_epitope_Rep1 1241.60742201417 1241.60632993586 66.366 2 0.2704973142744359 0.00036105427849320016 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 26306 11821 FIDVDDERWHY True H1975_Epitope_Rep1 1493.65754301073 1493.6558849037901 50.464 3 0.27042280120775175 0.00036105427849320016 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 117407 7604 VADKVHLMY True H1975_Epitope_Rep2 1074.55320161334 1074.55210993586 34.201 2 0.2704121855291224 0.00036105427849320016 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 89299 5248 RELQSQIQEA True NCI_RA007_Epitope_Rep3 1200.60986454232 1200.6087699358602 27.646 2 0.27040950033012934 0.00036105427849320016 0.9438714419765777 ['ENSG00000179085|ENST00000368400|DPM3', 'nc|ENSG00000179085|Q9P2X0-2|DPM3'] 28434 8318 FSEEQLNRY True H1975_Epitope_Rep2 1184.5462016565998 1184.5451099358602 36.948 2 0.27032742957407097 0.00036105427849320016 0.9438714419765777 ['ENSG00000064995|ENST00000361288|TAF11', 'nc|ENSG00000064995|Q15544-2|TAF11'] 138986 8117 YSEYPPFSHRY True H1975_Epitope_Rep1 1444.6411646706 1444.64006993586 36.166 2 0.2703152043719497 0.00036105427849320016 0.9438714419765777 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 53984 16636 KYLDEDTIYHL True PC9_epitope_Rep4 1408.68744615668 1408.68634993586 71.958 2 0.2703022880836239 0.00036105427849320016 0.9438714419765777 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 106455 10752 SVVDHFNRI True PC9_epitope_Rep2 1085.56179215109 1085.5606899358602 46.676 2 0.2702805620653544 0.00036105427849320016 0.9438714419765777 ['ENSG00000103035|ENST00000219313|PSMD7', 'ENST00000566015.1_1_16:74330767-74334139:+|nuORF', 'ENST00000422197.2_1_1:51837944-51838202:+|nuORF'] 94119 19821 RWFDKSFTF True PC9_epitope_Rep2 1232.59784330664 1232.59674993586 81.631 2 0.27027764835300844 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 130716 12161 VVDLLAPYAK True H1975_Epitope_Rep1 1087.62774645259 1087.62664993586 51.795 2 0.27025340233410106 0.00036105427849320016 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 53575 5416 KVTEGSFVYK True NCI_RA007_Epitope_Rep5 1156.61282466444 1156.61116490379 27.522 3 0.270231482922357 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 28931 7353 FTENDKEYQEY True H1975_Epitope_Rep3 1464.6045043783597 1464.60340993586 33.26 2 0.2702194885693873 0.00036105427849320016 0.9438714419765777 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 139263 9470 YTDFDGTRVY True H1975_Epitope_Rep1 1235.54586730343 1235.5447699358601 41.344 2 0.27021931556085893 0.00036105427849320016 0.9438714419765777 ['ENSG00000102096|ENST00000376509|PIM2', 'ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1', 'ENSG00000198355|ENST00000360612|PIM3'] 30012 17357 FYHKYFNYL True PC9_epitope_Rep2 1293.61824439805 1293.6166049037902 72.017 3 0.270198730307203 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 102693 7183 SQDPNRVEL True PC9_epitope_Rep4 1056.51998690876 1056.5188899358602 34.931 2 0.27013891817057495 0.00036105427849320016 0.9438714419765777 ['ENSG00000080200|ENST00000389622|CRYBG3'] 3194 8268 AGELTEDEVER True PC9_epitope_Rep1 1246.5677249468197 1246.5666299358602 36.636 2 0.27012798719468134 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 133304 12454 WEQDGGRWLP True H1975_Epitope_Rep2 1242.5781704912197 1242.5770699358602 52.994 2 0.2701114562790504 0.00036105427849320016 0.9438714419765777 ['ENSG00000166592|ENST00000299759|RRAD'] 37597 9262 GYSFTTTAER True PC9_epitope_Rep2 1131.51965255559 1131.5185499358602 40.964 2 0.27010173733560155 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 3783 8581 AGVEGSLIVEK True NCI_RA007_Epitope_Rep2 1100.607739284 1100.60664993586 38.022 2 0.27009652228819947 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 16002 8226 EEAENTLQSFR True H1975_Epitope_Rep1 1322.61025846514 1322.60916993586 36.585 2 0.2700955853035931 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 53766 10363 KYFDEHYEY True PC9_epitope_Rep6 1292.53496826656 1292.53333490379 50.582 3 0.2700756756457263 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 24134 7216 EYSKQMQRF True PC9_epitope_Rep5 1215.57064258263 1215.56954993586 32.72 2 0.2700638831214097 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 54049 17970 KYLSVQGQLF True PC9_epitope_Rep4 1181.64445914589 1181.6433699358602 77.175 2 0.2700522178120023 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 115402 6118 TVEVAEGEAVR True NCI_RA007_Epitope_Rep2 1158.5880664685799 1158.58696993586 28.403 2 0.26999808134720815 0.00036105427849320016 0.9438714419765777 ['ENSG00000147649|ENST00000336273|MTDH'] 8405 13273 ATQLAADLLKY True H1975_Epitope_Rep2 1205.66558851329 1205.66448993586 56.184 2 0.2699821509095371 0.00036105427849320016 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1'] 140742 18723 YYQNYFEKL True PC9_epitope_Rep2 1266.5920892198599 1266.59098993586 77.393 2 0.2699658957538501 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 54008 10994 KYLEHPLLL True NCI_RA007_Epitope_Rep4 1124.65938093404 1124.65828993586 49.155 2 0.26996470330195893 0.00036105427849320016 0.9438714419765777 ['ENSG00000114999|ENST00000233336|TTL'] 27681 12395 FQDEVAKAQQL True PC9_epitope_Rep1 1275.64591569787 1275.6448099358602 52.538 2 0.26994760873334306 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 54803 19915 LAFEEEFGRV True PC9_epitope_Rep3 1195.5873381925899 1195.58624993586 81.844 2 0.2699408251453364 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 52167 7439 KLYDIDVAK True NCI_RA007_Epitope_Rep4 1063.5913609438699 1063.59026993586 35.258 2 0.2699168840996758 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 7719 6296 ASREEILAQAK True PC9_epitope_Rep5 1214.66190011518 1214.66026490379 29.193 3 0.26991385012991265 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 33980 19017 GNFNYIEFTR True PC9_epitope_Rep5 1259.5934862021898 1259.5923899358602 78.174 2 0.26989254009181773 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 83198 20848 PYYSKFILI True PC9_epitope_Rep2 1142.6375828603 1142.63648993586 85.639 2 0.26979270792607707 0.00036105427849320016 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5'] 70990 7092 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep2 1282.5975859869 1282.59648993586 32.211 2 0.2697838164728342 0.00036105427849320016 0.9438714419765777 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 13712 20866 DQIAKYWEL True PC9_epitope_Rep5 1164.5815245361598 1164.5804299358601 85.313 2 0.2697684564380475 0.00036105427849320016 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 114889 8556 TTEESLRNYY True H1975_Epitope_Rep2 1274.5778957077 1274.57678993586 37.867 2 0.2697680647545252 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 94718 12160 RYLEQLHQL True PC9_epitope_Rep2 1198.64585612822 1198.64422490379 52.085 3 0.2697674843572847 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 25456 11268 FEM[Oxidation]SDFIVDTR True H1975_Epitope_Rep1 1374.6125673446998 1374.6114699358602 48.319 2 0.26976559406235645 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 40875 9067 HVLVTLGEK True PC9_epitope_Rep3 994.58113061334 994.58002993586 39.818 2 0.26976167494851955 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 12088 14885 DIFEAQIAGLR True NCI_RA007_Epitope_Rep2 1231.6560864587498 1231.6549899358602 62.575 2 0.26974725304748454 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 140604 19990 YYMEKELANF True PC9_epitope_Rep1 1306.5903749676997 1306.58926993586 81.717 2 0.2697399549892221 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105699|Q86X29-6|LSR', 'nc|ENSG00000105699|Q86X29-5|LSR', 'nc|ENSG00000105699|Q86X29-2|LSR', 'ENSG00000105699|ENST00000605618|LSR', 'nc|ENSG00000105699|Q86X29-3|LSR', 'nc|ENSG00000105699|Q86X29-4|LSR', 'nc|ENSG00000105699|Q86X29|LSR'] 106679 18942 SYANVKQWL True PC9_epitope_Rep1 1107.57129420563 1107.57018993586 77.644 2 0.26971562834518414 0.00036105427849320016 0.9438714419765777 ['ENSG00000174903|ENST00000311481|RAB1B', 'nc|ENSG00000233111|Q92928|RAB1C'] 89370 8250 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 36.719 2 0.2697073526637171 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 97080 11488 SEYMRNGDFLP True H1975_Epitope_Rep1 1327.5866865695898 1327.58558993586 49.171 2 0.26969878078292514 0.00036105427849320016 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'ENST00000462970.5_1_1:151227258-151237442:+|nuORF', 'ENST00000461434.1_1_1:151227258-151234901:+|nuORF'] 10864 11568 DALNIETAIK True NCI_RA007_Epitope_Rep1 1086.5920892198599 1086.59098993586 48.966 2 0.2696936505486876 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 84859 14071 QHQLIQEAL True PC9_epitope_Rep3 1078.5771078620598 1078.5760099358602 59.211 2 0.269691639463658 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ACTN4|p.Q709H|1|0.35|ENSG00000130402|chr19:38725840-38725840|G/T|missense_variant'] 23967 12237 EYPDRIMNTF True NCI_RA007_Epitope_Rep4 1284.5808729131597 1284.5797699358602 54.066 2 0.26965581426900487 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 94121 20480 RWFDKSFTF True PC9_epitope_Rep3 1232.59784330664 1232.59674993586 84.035 2 0.26965083467675943 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 33977 19130 GNFNYIEFTR True PC9_epitope_Rep3 1259.5934862021898 1259.5923899358602 78.805 2 0.2696343492497081 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 119308 8147 VELQELNDR True NCI_RA007_Epitope_Rep1 1114.5618517207397 1114.56074993586 35.689 2 0.26961745762376854 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 77516 17045 NYQGHFHLF True PC9_epitope_Rep5 1161.5355774032498 1161.5344899358602 70.582 2 0.2695973019615499 0.00036105427849320016 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 52712 14706 KQLDDLKVEL True PC9_epitope_Rep2 1199.6761531969898 1199.6745149037902 61.835 3 0.269567209279241 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 17903 12457 EIDM[Oxidation]NDIKAFY True H1975_Epitope_Rep2 1373.6173183719698 1373.61622993586 53.005 2 0.269529151366735 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 18749 15025 ELDPLTGEWHY True H1975_Epitope_Rep2 1358.61428121642 1358.6131899358602 62.943 2 0.2695128197028577 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 44394 10328 INEILSNALK True H1975_Epitope_Rep1 1113.63937376545 1113.63826993586 44.675 2 0.269511772160796 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 65427 4957 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 24.15 2 0.2694869736614138 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 104206 5770 SSDKGRLCYY True H1975_Epitope_Rep2 1190.53900810118 1190.5379099358602 27.188 2 0.26947795322698453 0.00036105427849320016 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 136666 8324 YIDQGRNPQLY True H1975_Epitope_Rep3 1365.66771377161 1365.6666099358602 37.001 2 0.26946647501980053 0.00036105427849320016 0.9438714419765777 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000503112.1_1_5:6372618-6374583:-|nuORF'] 10072 11154 AYVHMVTHF True PC9_epitope_Rep6 1103.52223583823 1103.52112993586 53.857 2 0.26943777224748194 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 114478 11755 TSETPDYLLKY True H1975_Epitope_Rep3 1328.6499980188 1328.64890993586 50.359 2 0.2694237655543428 0.00036105427849320016 0.9438714419765777 ['ENSG00000105656|ENST00000262809|ELL'] 138888 7494 YSDSLVQKGY True H1975_Epitope_Rep2 1158.5557037111398 1158.55460993586 33.775 2 0.26939391353423897 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 57421 8251 LEIIGNSKNVA True H1975_Epitope_Rep3 1156.64518742188 1156.6440899358602 36.723 2 0.2693599755769591 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 72612 9565 M[Oxidation]VVESAYEVIK True H1975_Epitope_Rep3 1282.64789022426 1282.6467899358602 41.8 2 0.26935881665708394 0.00036105427849320016 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB'] 79090 18996 PFVDHVFTF True PC9_epitope_Rep6 1107.53893144819 1107.5378299358601 85.711 2 0.26935351923082174 0.00036105427849320016 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 77598 18951 NYTDIKDYL True PC9_epitope_Rep4 1143.54480467427 1143.54370993586 80.983 2 0.2693084130826117 0.00036105427849320016 0.9438714419765777 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 62722 9237 LLYESPERY True H1975_Epitope_Rep2 1168.57643915572 1168.57534993586 40.486 2 0.2692956805734297 0.00036105427849320016 0.9438714419765777 ['ENSG00000168394|ENST00000354258|TAP1', 'nc|ENSG00000168394|Q03518-2|TAP1'] 49365 20888 KIIDEDGLLNL True PC9_epitope_Rep1 1241.68671788069 1241.68562993586 85.166 2 0.2692720967604143 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 113679 13649 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61225490379 64.277 3 0.2692685021981932 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 31259 7109 [Acetylation]-GDREQLLQR True NCI_RA007_Epitope_Rep1 1155.5996345280898 1155.5985299358601 31.643 2 0.26922962774474646 0.00036105427849320016 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH'] 42620 7635 IETIEVM[Oxidation]EDR True NCI_RA007_Epitope_Rep2 1249.58601824369 1249.5849299358601 34.323 2 0.26921032183808424 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 14998 20787 DYVEGLRVF True PC9_epitope_Rep1 1096.5553097883198 1096.5542099358602 84.787 2 0.2692059036407185 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 14661 21796 DVNFEFPEFQL True H1975_Epitope_Rep1 1383.63468230783 1383.63358993586 90.598 2 0.26919316037493285 0.00036105427849320016 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 94439 21552 RYFLPPYTF True PC9_epitope_Rep1 1202.6124307416196 1202.61132993586 87.721 2 0.2691673948603419 0.00036105427849320016 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 96333 6576 SEFEQNLSEK True NCI_RA007_Epitope_Rep2 1209.5513466066898 1209.5502499358602 30.193 2 0.26914877661109204 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 5796 13375 APFDLFENR True H1975_Epitope_Rep3 1107.53490869691 1107.53380993586 56.71 2 0.2691379692444962 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'HSP90AA1|p.R346H|1|0.5|ENSG00000080824|chr14:102084509-102084509|C/T|missense_variant'] 116571 13088 TYGEIFEKF True NCI_RA007_Epitope_Rep3 1132.54407639828 1132.5429699358601 58.763 2 0.26913232320601543 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 44340 20168 IMLEALERV True PC9_epitope_Rep1 1072.59506642532 1072.59396993586 82.406 2 0.2690935907701118 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 73928 16854 NHIEPLKIQL True PC9_epitope_Rep5 1203.6975573479099 1203.69592490379 69.839 3 0.26905525004991565 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 31289 7769 GDVENIEVVQK True NCI_RA007_Epitope_Rep2 1228.6299312805597 1228.62882993586 34.846 2 0.269025796393418 0.00036105427849320016 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 94399 12152 RYFDPANGKF True PC9_epitope_Rep2 1213.5880068989297 1213.58635490379 52.052 3 0.26898971943555233 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 94445 21378 RYFLPPYTF True PC9_epitope_Rep5 1202.6124307416196 1202.61132993586 87.292 2 0.26898933986017337 0.00036105427849320016 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 29653 7086 FVM[Oxidation]EVEVDGQK True H1975_Epitope_Rep1 1295.60675368827 1295.6056499358601 32.283 2 0.2689779902721202 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 92436 16020 RQVAFDFTKV True PC9_epitope_Rep5 1209.65060715549 1209.64897490379 66.611 3 0.268922914663558 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 23468 11216 EVYELLDSPGK True NCI_RA007_Epitope_Rep1 1248.6237832709596 1248.62268993586 47.627 2 0.26888656042797554 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 52795 12438 KQTALVELLK True PC9_epitope_Rep4 1141.7070594024499 1141.7054249037901 55.649 3 0.2688776556467041 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 64564 9416 LRDLEDSLAR True PC9_epitope_Rep4 1186.6305999868998 1186.6289549037901 43.829 3 0.2688513792399132 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 107302 9518 SYRDSYESY True PC9_epitope_Rep1 1168.4672826295598 1168.46618993586 41.466 2 0.2687805140679046 0.00036105427849320016 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 106911 20572 SYIRPEDIVNF True PC9_epitope_Rep3 1351.67721582615 1351.67610993586 84.396 2 0.2687663964243321 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 74604 7730 NLDQATRVAY True H1975_Epitope_Rep2 1149.5778361380499 1149.5767299358602 34.686 2 0.2687584649299912 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 135785 7134 YENEVALRQ True PC9_epitope_Rep4 1120.5512870370399 1120.55018993586 34.715 2 0.26875726707839054 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 22831 10951 EVEELILTESK True H1975_Epitope_Rep3 1288.67621276664 1288.67510993586 47.211 2 0.2687477431831376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 140124 20482 YVQDFLNHL True PC9_epitope_Rep5 1147.56620882519 1147.5651099358602 83.823 2 0.268743063547594 0.00036105427849320016 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 139734 19362 YTYEELLNRV True PC9_epitope_Rep4 1298.65066672514 1298.6495699358602 82.586 2 0.2686798841849968 0.00036105427849320016 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 54046 18687 KYLSVQGQLF True PC9_epitope_Rep2 1181.64445914589 1181.6433699358602 77.247 2 0.268672256610082 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 1364 14328 AEEEDFLRLP True H1975_Epitope_Rep2 1217.5928174958499 1217.59172993586 60.262 2 0.2686686480435749 0.00036105427849320016 0.9438714419765777 ['ENSG00000167487|ENST00000300976|KLHL26'] 114378 9377 TSDHFETIMKY True H1975_Epitope_Rep3 1370.6176523446998 1370.61601490379 41.068 3 0.2686597004049108 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 85387 5108 QLEEAEEEAQR True NCI_RA007_Epitope_Rep2 1330.60008770426 1330.5989899358601 24.492 2 0.2686491968609942 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 42670 10599 IEVIEIM[Oxidation]TDR True NCI_RA007_Epitope_Rep1 1233.62748913285 1233.62638993586 45.214 2 0.2686435108375324 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 114338 6722 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 30.77 2 0.2686358427540315 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 12857 16764 DLLEVADVLEK True H1975_Epitope_Rep1 1242.67073346338 1242.66962993586 69.883 2 0.2685451082569493 0.00036105427849320016 0.9438714419765777 ['ENST00000509696.5_1_4:7062591-7066009:-|nuORF', 'ENSG00000109519|ENST00000264954|GRPEL1'] 96855 3743 SESPKEPEQLR True NCI_RA007_Epitope_Rep4 1298.64664397386 1298.6449949037901 20.545 3 0.26851337821199583 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 102944 20230 SQINKFLYL True PC9_epitope_Rep5 1124.62299542532 1124.62188993586 82.861 2 0.2685078420874244 0.00036105427849320016 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 116822 19649 TYLVDMQRF True PC9_epitope_Rep5 1171.5695799534699 1171.56848993586 80.636 2 0.26848724942459273 0.00036105427849320016 0.9438714419765777 ['ENSG00000180340|ENST00000315323|FZD2'] 135704 16172 YEILTPNSIPK True PC9_epitope_Rep4 1273.69180326113 1273.69070993586 70.149 2 0.268448436501519 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 47845 13189 IYSVFRNAASF True NCI_RA007_Epitope_Rep5 1273.6455217750497 1273.6444299358602 57.409 2 0.2684483441193828 0.00036105427849320016 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 53730 21015 KYEELFPAF True PC9_epitope_Rep3 1142.5648118428596 1142.56370993586 86.112 2 0.2684367770875322 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 76551 10883 NTDPWAGYRY True H1975_Epitope_Rep1 1241.5465360097699 1241.54542993586 46.821 2 0.2683913152111811 0.00036105427849320016 0.9438714419765777 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 93660 9826 RTFTWLVGK True NCI_RA007_Epitope_Rep3 1106.6236641316598 1106.6225699358602 45.723 2 0.2683707607302793 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 140736 13055 YYQHIVTTL True PC9_epitope_Rep6 1136.5866099166 1136.58550993586 61.82 2 0.2683558640960924 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 106912 20587 SYIRPEDIVNF True PC9_epitope_Rep5 1351.67721582615 1351.67610993586 84.235 2 0.2683393331085793 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 77636 11123 NYYEQWGK True PC9_epitope_Rep2 1086.47705946762 1086.4759699358601 48.109 2 0.268291295157041 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 56135 11153 LDM[Oxidation]DSIIAEVK True H1975_Epitope_Rep1 1248.6271547796798 1248.62604993586 47.868 2 0.26828644450530026 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 99355 15203 SLDSQKFVTV True PC9_epitope_Rep1 1122.59208921986 1122.59098993586 63.298 2 0.26828434477659896 0.00036105427849320016 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'ENST00000558080.1_1_15:44865712-44867255:-|nuORF'] 61236 8684 LLDQGQLNKY True H1975_Epitope_Rep1 1190.62953735774 1190.62844993586 38.333 2 0.2682720819622157 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 10859 15093 DALNDEINFLR True H1975_Epitope_Rep1 1318.6517293543 1318.65062993586 63.308 2 0.2682669154916828 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF'] 91291 20693 RLYDGLFKVI True PC9_epitope_Rep5 1222.70739375562 1222.70575490379 84.651 3 0.26826122158077864 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 14870 22937 DYFFKPVLF True PC9_epitope_Rep1 1174.60628273202 1174.6051899358602 93.028 2 0.2682527470961558 0.00036105427849320016 0.9438714419765777 ['ENST00000369452.8_1_10:112723943-112724024:+|nuORF'] 117061 19950 TYQRWQFTL True PC9_epitope_Rep2 1241.61930702721 1241.61820993586 82.137 2 0.2682278685304747 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 70063 18950 LYHDIFSRL True PC9_epitope_Rep5 1162.61349337078 1162.6118549037901 77.915 3 0.26821202365074276 0.00036105427849320016 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 33974 19123 GNFNYIEFTR True PC9_epitope_Rep1 1259.5934862021898 1259.5923899358602 78.347 2 0.26820129307512275 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 15044 7537 EAAENSLVAYK True NCI_RA007_Epitope_Rep2 1193.5928174958497 1193.59172993586 33.943 2 0.2681287941339797 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE'] 92289 15548 RQLESMIRL True PC9_epitope_Rep5 1144.6386625727998 1144.63702490379 64.815 3 0.2680869231083632 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 94700 8775 RYLEQLHQL True NCI_RA007_Epitope_Rep1 1198.64585612822 1198.64422490379 38.133 3 0.26808324520231047 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 138796 12724 YSDFPFHEDY True H1975_Epitope_Rep3 1318.51423282198 1318.5131299358602 54.153 2 0.2680746105031908 0.00036105427849320016 0.9438714419765777 ['ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF'] 48885 3545 KETAEAYLGKK True NCI_RA007_Epitope_Rep2 1236.6714021697196 1236.66976490379 18.441 3 0.2680615874049706 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 131917 9492 VYERELQTF True NCI_RA007_Epitope_Rep5 1183.5873381925899 1183.58624993586 43.143 2 0.2680602222740841 0.00036105427849320016 0.9438714419765777 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 26956 22525 FLITILDHL True PC9_epitope_Rep2 1083.63283183303 1083.6317299358602 92.134 2 0.26802446651882017 0.00036105427849320016 0.9438714419765777 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2', 'nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1'] 22191 12230 ETDEKDFYLY True H1975_Epitope_Rep2 1321.5714133449299 1321.57030993586 52.127 2 0.2680169789771833 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 135250 12566 YAYDGKDYLAL True NCI_RA007_Epitope_Rep5 1290.6132185872598 1290.6121299358601 54.989 2 0.2680152514035149 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 16010 12493 EEAENTLQSFR True PC9_epitope_Rep1 1322.61025846514 1322.60916993586 52.922 2 0.2680096436550552 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 4799 16506 ALELDSNLYR True PC9_epitope_Rep5 1192.60880191316 1192.6077099358602 68.488 2 0.26800160500788417 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 35166 6613 GSDDTELRY True H1975_Epitope_Rep2 1054.45671794586 1054.45562993586 30.345 2 0.2679927821353435 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'ENST00000487284.2_1_7:101917466-101926379:+|nuORF'] 16566 7658 EEQLQQIRAE True PC9_epitope_Rep6 1242.6204292260197 1242.6193299358602 38.778 2 0.2679850091595555 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 132444 10853 VYNSEYYHF True NCI_RA007_Epitope_Rep2 1220.5138388991602 1220.51274993586 46.82 2 0.2679747033992263 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 34278 12732 GPLLEEQALTK True PC9_epitope_Rep4 1197.6605031328497 1197.6594099358601 56.828 2 0.26792629243781163 0.00036105427849320016 0.9438714419765777 ['ENSG00000171262|ENST00000397609|FAM98B', 'nc|ENSG00000171262|Q52LJ0-1|FAM98B'] 114423 7476 TSDVDLDKY True H1975_Epitope_Rep2 1054.4818700645399 1054.48076993586 33.704 2 0.2678702171960373 0.00036105427849320016 0.9438714419765777 ['ENST00000569380.5_1_16:1827941-1828049:-|nuORF', 'ENST00000564709.5_1_16:1827100-1828401:-|nuORF', 'ENSG00000162032|ENST00000566339|SPSB3'] 24207 13655 EYVEKFYRI True PC9_epitope_Rep4 1245.6393737654498 1245.63826993586 60.415 2 0.26785815965460547 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 46756 5335 IVAVTGAEAQK True NCI_RA007_Epitope_Rep2 1085.6080736371698 1085.6069699358602 25.372 2 0.26783013304687486 0.00036105427849320016 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'ENST00000569825.1_1_16:70287541-70292096:-|nuORF'] 94742 21605 RYLMDPDTFTF True PC9_epitope_Rep5 1404.6383877892797 1404.63728993586 88.143 2 0.2678063607220539 0.00036105427849320016 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 76387 9315 NSLESYAFNM[Oxidation]K True H1975_Epitope_Rep1 1318.5863525968596 1318.58524993586 40.737 2 0.26780053986326113 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 543 9711 [Acetylation]-AAQGEPQVQFK True H1975_Epitope_Rep3 1243.6197012663295 1243.6186099358601 42.373 2 0.2677825491981125 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 94408 13656 RYFDPANGKF True PC9_epitope_Rep5 1213.5880068989297 1213.58635490379 57.551 3 0.26775948927661347 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 109255 10162 TGAAPIIDVVR True H1975_Epitope_Rep1 1110.6397081186199 1110.6386099358601 44.027 2 0.2677400018467776 0.00036105427849320016 0.9438714419765777 ['ENSG00000166441|ENST00000314138|RPL27A'] 93658 3789 RTFSYIKNK True NCI_RA007_Epitope_Rep4 1155.6400424717897 1155.63838490379 20.751 3 0.2677336103704968 0.00036105427849320016 0.9438714419765777 ['ENSG00000170776|ENST00000394518|AKAP13', 'nc|ENSG00000170776|Q12802-4|AKAP13', 'nc|ENSG00000170776|Q12802-2|AKAP13', 'ENST00000560957.1_1_15:86225432-86228206:+|nuORF'] 140740 19364 YYQNYFEKL True PC9_epitope_Rep1 1266.5920892198599 1266.59098993586 79.291 2 0.2677327304929229 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 132311 11637 VYLPNINKI True NCI_RA007_Epitope_Rep3 1072.62808080576 1072.6269899358601 52.896 2 0.2677260543676495 0.00036105427849320016 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 19686 16587 ELSDFISYLQR True H1975_Epitope_Rep3 1369.68778050985 1369.6866899358602 69.298 2 0.2677181410365871 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 3196 7576 AGELTEDEVER True PC9_epitope_Rep2 1246.5677249468197 1246.5666299358602 34.51 2 0.2676782373627522 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 70084 20126 LYIGWDKHYGF True PC9_epitope_Rep5 1397.67682190333 1397.6751749037899 82.462 3 0.26767483845639284 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 28008 12259 FQYDHEAFL True H1975_Epitope_Rep1 1168.5189242795998 1168.5178299358602 52.177 2 0.2676536235605515 0.00036105427849320016 0.9438714419765777 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF', 'ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF'] 70956 12095 M[Oxidation]ENFVAFVDK True NCI_RA007_Epitope_Rep1 1214.5641606002998 1214.56306993586 51.035 2 0.26761578621683035 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 53614 4784 KVYNGILEK True NCI_RA007_Epitope_Rep3 1062.6073453611798 1062.6062499358602 25.781 2 0.2676054637640205 0.00036105427849320016 0.9438714419765777 ['ENSG00000109689|ENST00000467087|STIM2', 'ENST00000467011.5_1_4:27022655-27024615:+|nuORF', 'nc|ENSG00000109689|Q9P246-2|STIM2'] 136414 11392 YHFEEVQKL True PC9_epitope_Rep4 1191.5924235730297 1191.5907749037901 51.59 3 0.26758650414764484 0.00036105427849320016 0.9438714419765777 ['ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant'] 93860 7075 RVFSWSQAK True NCI_RA007_Epitope_Rep4 1107.58252759567 1107.5814299358601 33.837 2 0.26758356332891936 0.00036105427849320016 0.9438714419765777 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 10053 9299 AYVHMVTHF True NCI_RA007_Epitope_Rep2 1103.52223583823 1103.52112993586 40.778 2 0.2675831631329273 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 120524 20238 VFYPYPQYF True PC9_epitope_Rep6 1222.5698972232997 1222.5688099358601 90.529 2 0.26757970975432144 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 16565 7580 EEQLQQIRAE True PC9_epitope_Rep6 1242.6204292260197 1242.6193299358602 38.43 2 0.2675608514111496 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 116998 21137 TYQDIFRDF True PC9_epitope_Rep5 1203.5560380643099 1203.5549499358601 86.363 2 0.2675463476062308 0.00036105427849320016 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 22252 4552 ETDPDAQAKAY True H1975_Epitope_Rep2 1207.5356965425499 1207.5345899358601 22.617 2 0.26751121801265154 0.00036105427849320016 0.9438714419765777 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 132365 18857 VYMDWYEKF True PC9_epitope_Rep6 1279.5583465634297 1279.55724993586 85.181 2 0.2674951714732121 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 131918 14355 VYERELQTF True PC9_epitope_Rep1 1183.5873381925899 1183.58624993586 60.04 2 0.26748278022130856 0.00036105427849320016 0.9438714419765777 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 95017 17045 RYQQWMERF True PC9_epitope_Rep1 1342.6240751378198 1342.62241490379 70.389 3 0.26747771791846503 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 109789 5830 THISSQNSEL True PC9_epitope_Rep5 1114.52546621202 1114.52436993586 27.418 2 0.2674515708388726 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 30144 21043 FYQRFPLSF True PC9_epitope_Rep5 1203.6076797143498 1203.60658993586 86.001 2 0.26744350046711324 0.00036105427849320016 0.9438714419765777 ['ENSG00000134109|ENST00000256497|EDEM1', 'ENST00000443790.1_1_3:5229490-5231099:+|nuORF'] 47185 16340 IYADNQVMHF True PC9_epitope_Rep4 1236.55974354576 1236.55864993586 70.816 2 0.2674178592257497 0.00036105427849320016 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 85379 8164 QLEDGRTLSDY True H1975_Epitope_Rep2 1295.59935942827 1295.5982699358601 36.353 2 0.2674127627208589 0.00036105427849320016 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 89723 9978 REYQELMNV True NCI_RA007_Epitope_Rep5 1180.55465816532 1180.5535699358602 45.022 2 0.26737655087777634 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 138950 14332 YSEIKDFLSY True H1975_Epitope_Rep2 1263.60231955039 1263.6012299358601 60.277 2 0.26737649997860574 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-4|DCLRE1C', 'ENST00000492201.5_1_10:14962436-14970058:-|nuORF'] 68718 9298 LVDEPQNLIK True H1975_Epitope_Rep3 1167.6499384491499 1167.6488499358602 40.759 2 0.2673599128023821 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 70387 19784 LYQEVFGRL True PC9_epitope_Rep3 1123.6025943339098 1123.6014899358602 81.329 2 0.2673337874902025 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 94626 7624 RYLDKTEQW True NCI_RA007_Epitope_Rep1 1237.6091362663299 1237.60802993586 33.649 2 0.2672973058951373 0.00036105427849320016 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 42669 10158 IEVIEIM[Oxidation]TDR True H1975_Epitope_Rep3 1233.62748913285 1233.62638993586 44.115 2 0.26729708864490165 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 119014 12594 VEFTRSLFVN True NCI_RA007_Epitope_Rep4 1210.6346227381798 1210.63352993586 55.463 2 0.26726344289120674 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 4724 16093 ALDTM[Oxidation]NFDVIK True PC9_epitope_Rep4 1281.62748913285 1281.62638993586 69.838 2 0.2672402523812259 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 136099 14605 YGEPGEVFINK True PC9_epitope_Rep1 1251.6135529404298 1251.61244993586 61.002 2 0.26720503344515345 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 22341 4831 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56272993586 23.672 2 0.26720348908860364 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 42418 4608 IEQAYDNPHEA True H1975_Epitope_Rep3 1285.55749461629 1285.5563899358601 22.847 2 0.2672021971466459 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 119879 16643 VEVTEFEDIK True PC9_epitope_Rep1 1207.59723416995 1207.59612993586 68.846 2 0.26719025611394237 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 69477 8241 LVSESSDVLPK True NCI_RA007_Epitope_Rep1 1172.6288686514001 1172.6277699358602 36.055 2 0.2671740041480348 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 12604 5754 DLEAHIDSANK True NCI_RA007_Epitope_Rep1 1211.57823006087 1211.57712993586 26.438 2 0.26715755726029505 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 53095 11108 KSDVEAIFSK True PC9_epitope_Rep5 1122.5920892198599 1122.59044490379 47.715 3 0.2671555703840471 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 40595 4656 HTDILKEKY True H1975_Epitope_Rep2 1145.60807363717 1145.60641490379 23.007 3 0.26715242723467886 0.00036105427849320016 0.9438714419765777 ['DTWD1|p.R271S|1|0.23|ENSG00000104047|chr15:49643476-49643476|A/C|missense_variant', 'nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 139013 16478 YSHDGAFLAV True PC9_epitope_Rep1 1078.5083595959 1078.5072699358602 68.209 2 0.2671312877339722 0.00036105427849320016 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 6774 12426 AQEYEALLNIK True H1975_Epitope_Rep1 1290.6819668534197 1290.68086993586 52.833 2 0.2671114490558233 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 58550 20394 LFDQAFGLPR True PC9_epitope_Rep1 1162.6134933707797 1162.6123899358602 83.266 2 0.26710257680276067 0.00036105427849320016 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 16776 6121 EFFNGKEPSR True NCI_RA007_Epitope_Rep1 1209.5778361380496 1209.57619490379 27.846 3 0.2671009053490295 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 14311 11006 DTDEYVLKY True H1975_Epitope_Rep3 1144.52882025696 1144.5277299358602 47.423 2 0.26709342547579207 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1'] 17899 15306 EIDMNDIKAFY True H1975_Epitope_Rep1 1357.62240337197 1357.6213099358602 64.143 2 0.2670819562247981 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 52723 15405 KQLDDLKVEL True PC9_epitope_Rep5 1199.6761531969898 1199.6745149037902 64.264 3 0.26700842773305755 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 48390 3716 KEAYVNANQA True NCI_RA007_Epitope_Rep4 1106.5356369729 1106.53452993586 20.427 2 0.2669930397214517 0.00036105427849320016 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'ENST00000495407.1_1_10:121602688-121616909:-|nuORF'] 132162 8668 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5287299358602 40.831 2 0.2669688062392368 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 21306 14116 ERISLQQEL True PC9_epitope_Rep2 1114.59823722946 1114.5971499358602 59.569 2 0.26694432174288346 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 96268 10856 SEEQYNKIVIP True H1975_Epitope_Rep2 1318.6768814729799 1318.6757899358602 46.787 2 0.2669300921119331 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 57878 6854 LEQEYVHQV True H1975_Epitope_Rep2 1143.55603806431 1143.5549499358601 31.282 2 0.26690412184709483 0.00036105427849320016 0.9438714419765777 ['ENSG00000137760|ENST00000428149|ALKBH8', 'nc|ENSG00000137760|Q96BT7-4|ALKBH8'] 22254 4445 ETDPDAQAKAY True H1975_Epitope_Rep3 1207.5356965425499 1207.5345899358601 22.22 2 0.26690198933765347 0.00036105427849320016 0.9438714419765777 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 15899 7036 EDQTEYLEER True H1975_Epitope_Rep3 1310.5626395663799 1310.56154993586 32.029 2 0.26690182829340314 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 108392 16774 TEDYLSLILNR True H1975_Epitope_Rep3 1335.7034305739899 1335.70232993586 70.067 2 0.2668590114691382 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 22209 7694 ETDHINQIGY True H1975_Epitope_Rep2 1188.54111627616 1188.54000993586 34.548 2 0.2668207740508164 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 48426 13048 KEEDVLKFLAA True H1975_Epitope_Rep2 1261.69180326113 1261.69070993586 55.311 2 0.2668185742753658 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 14100 5983 DSDSMEDTGHY True H1975_Epitope_Rep3 1255.42991114467 1255.42880993586 28.025 2 0.2667943535038867 0.00036105427849320016 0.9438714419765777 ['ENSG00000132716|ENST00000368074|DCAF8', 'nc|ENSG00000132716|Q5TAQ9-2|DCAF8'] 140860 18816 YYTKGFALL True PC9_epitope_Rep4 1074.5749826037397 1074.57388993586 80.461 2 0.2667872632094046 0.00036105427849320016 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 132153 10176 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 44.094 3 0.2667789513423469 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 135268 19565 YAYFNFPEL True H1975_Epitope_Rep3 1162.5335117145798 1162.5324099358602 81.977 2 0.2667633147163306 0.00036105427849320016 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 94631 7435 RYLDKTEQW True NCI_RA007_Epitope_Rep4 1237.6091362663299 1237.60802993586 35.243 2 0.2667605654969335 0.00036105427849320016 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 129248 6677 VTDPEKLNNY True H1975_Epitope_Rep2 1191.57716743171 1191.57606993586 30.592 2 0.2667573361035651 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000104885|ENST00000398665|DOT1L'] 137191 9412 YLDYDDTRY True H1975_Epitope_Rep2 1222.51423282198 1222.5131299358602 41.17 2 0.26672436963418755 0.00036105427849320016 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000535343.5_1_12:132632219-132636084:+|nuORF', 'NOC4L-STAB2|1|fusion'] 56666 7293 LEAAIAEAEER True H1975_Epitope_Rep1 1200.59863115228 1200.5975299358602 33.063 2 0.26670393243942436 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF'] 94837 21457 RYMDQWVPVI True PC9_epitope_Rep1 1305.65397828377 1305.65288993586 87.375 2 0.26670084511965564 0.00036105427849320016 0.9438714419765777 ['ENSG00000116717|ENST00000370986|GADD45A', 'nc|ENSG00000116717|P24522-2|GADD45A'] 14325 12591 DTDISLIRY True H1975_Epitope_Rep3 1094.5607890915799 1094.5596899358602 53.634 2 0.26669184195674545 0.00036105427849320016 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 4456 10579 AKDIGFIKLD True NCI_RA007_Epitope_Rep4 1118.63356010902 1118.6324699358602 47.536 2 0.2666771921107883 0.00036105427849320016 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000401543.2_1_9:90140306-90140387:+|nuORF', 'ENST00000496507.1_1_4:25680486-25680639:+|nuORF', 'ENST00000557367.2_1_14:50050387-50052826:-|nuORF'] 32960 6399 GISQEQM[Oxidation]QEFR True NCI_RA007_Epitope_Rep1 1367.6139643270296 1367.61286993586 28.916 2 0.26666722172405005 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 83199 21198 PYYSKFILI True PC9_epitope_Rep3 1142.6375828603 1142.63648993586 86.828 2 0.2666508742525432 0.00036105427849320016 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5'] 36659 15538 GVLQLGNIVFK True NCI_RA007_Epitope_Rep4 1186.70739375562 1186.70628993586 67.485 2 0.2666453281642409 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 94744 12542 RYLNEFEEL True NCI_RA007_Epitope_Rep5 1211.5822528121498 1211.5811499358601 54.898 2 0.2665929298770143 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 74573 9526 NLDIERPTY True H1975_Epitope_Rep2 1119.5560380643099 1119.5549499358601 41.613 2 0.2665904164608588 0.00036105427849320016 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'TUBA1A|p.R214C|2|0.26|ENSG00000167552|chr12:49185726-49185726|G/A|missense_variant', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 49355 8332 KIFSGVFVK True NCI_RA007_Epitope_Rep3 1023.6117024656298 1023.61060993586 39.889 2 0.2665854853797346 0.00036105427849320016 0.9438714419765777 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 87693 13005 QVDPLSALKY True H1975_Epitope_Rep3 1132.6128246644398 1132.61172993586 55.258 2 0.2665685531403367 0.00036105427849320016 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 87052 14098 QSDPWQQELY True H1975_Epitope_Rep2 1292.5673310240002 1292.56622993586 59.383 2 0.2665588926136501 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 17902 15291 EIDMNDIKAFY True H1975_Epitope_Rep3 1357.62240337197 1357.6213099358602 64.225 2 0.2665505310289212 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 123017 20063 VGYDKDFLTI True PC9_epitope_Rep2 1169.5968402471299 1169.59574993586 82.578 2 0.26654267883305394 0.00036105427849320016 0.9438714419765777 ['ENSG00000123066|ENST00000281928|MED13L'] 53768 14749 KYFDKVVTL True PC9_epitope_Rep2 1111.62774645259 1111.62664993586 61.999 2 0.2665193882360419 0.00036105427849320016 0.9438714419765777 ['ENSG00000166813|ENST00000394412|KIF7'] 9790 18547 AYLESFYKF True PC9_epitope_Rep6 1166.5648118428599 1166.56370993586 83.981 2 0.2665171781468773 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 47233 17738 IYDPNLAFLRF True NCI_RA007_Epitope_Rep5 1367.7237720957498 1367.72266993586 75.009 2 0.2665113007283327 0.00036105427849320016 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 54048 17885 KYLSVQGQLF True PC9_epitope_Rep4 1181.64445914589 1181.6433699358602 76.834 2 0.26650772839713144 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 128872 5893 VSSTSEIGTRY True H1975_Epitope_Rep2 1198.5829810881398 1198.58188993586 27.653 2 0.2664810441923896 0.00036105427849320016 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 107542 11588 TADHNLLLYEA True H1975_Epitope_Rep2 1258.6193665968601 1258.61826993586 49.637 2 0.26646864222779737 0.00036105427849320016 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 105655 4722 SVFQTTDTK True NCI_RA007_Epitope_Rep3 1025.5029398622898 1025.50184993586 25.523 2 0.26645575496115825 0.00036105427849320016 0.9438714419765777 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 28268 11536 FRVKYETEL True PC9_epitope_Rep4 1183.62372370131 1183.62262993586 52.136 2 0.26643869669230813 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 24183 18120 EYTPRSWNF True PC9_epitope_Rep5 1198.54072235334 1198.5396299358601 74.709 2 0.2664090913795111 0.00036105427849320016 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 85376 16492 QLEDELVSLQK True PC9_epitope_Rep4 1300.6874461566802 1300.68634993586 71.406 2 0.26640675506191375 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 37532 21349 GYLPNQLFRTF True PC9_epitope_Rep3 1354.70337100434 1354.7022699358602 87.416 2 0.2664043921127224 0.00036105427849320016 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 106948 20980 SYLDQVKLQF True PC9_epitope_Rep5 1239.64993844915 1239.6488499358602 85.759 2 0.2663620409397123 0.00036105427849320016 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'SIN3A|p.P268Hfs*19|1|0.34|ENSG00000169375|chr15:75411697-75411697|G/-|frameshift_variant'] 86480 19579 QQVQRLPFL True PC9_epitope_Rep5 1127.64512785223 1127.64402993586 80.362 2 0.2663363155105176 0.00036105427849320016 0.9438714419765777 ['ENSG00000132963|ENST00000380842|POMP'] 33963 9817 GNEDIITLR True NCI_RA007_Epitope_Rep1 1029.54547338061 1029.54436993586 42.189 2 0.26631226817623277 0.00036105427849320016 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA'] 77254 17677 NYIPRFWTF True NCI_RA007_Epitope_Rep2 1242.6185787512197 1242.61748993586 73.5 2 0.2663080587142542 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 3475 9750 [Acetylation]-AGLNSLEAVKR True H1975_Epitope_Rep1 1198.66698581192 1198.6658899358602 42.434 2 0.2663034550131209 0.00036105427849320016 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 55965 10074 LDIDSPPITAR True H1975_Epitope_Rep1 1196.6401020414398 1196.63900993586 43.69 2 0.26629104056892644 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 15167 8957 EAESSPFVER True PC9_epitope_Rep3 1149.5302172392899 1149.52912993586 39.401 2 0.26628344598568665 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 72269 14346 MSDPYMPSYY True H1975_Epitope_Rep2 1252.4780476374 1252.4769499358601 60.331 2 0.2662293519448356 0.00036105427849320016 0.9438714419765777 ['YTHDF3|p.G256Afs*15|1|0.27|ENSG00000185728|chr8:63186776-63186776|G/-|frameshift_variant', 'ENSG00000185728|ENST00000539294|YTHDF3'] 48447 7919 KEEELQAALAR True PC9_epitope_Rep2 1256.67246479888 1256.6708249037902 35.826 3 0.26621657447455926 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH11|p.K1088del|1|0.12|ENSG00000133392|chr16:15737478-15737480|CTT/-|inframe_deletion', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 73923 14982 NHIEPLKIQL True PC9_epitope_Rep4 1203.6975573479099 1203.69646993586 65.566 2 0.2661965668554982 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 116518 16945 TYDYNFHSF True PC9_epitope_Rep4 1192.48253877088 1192.4814499358602 73.169 2 0.2661948989659211 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 110048 16893 THYDHVLIEL True PC9_epitope_Rep2 1238.6295373577398 1238.62844993586 70.224 2 0.26617570231344545 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 113293 14485 TQIDHYVGI True PC9_epitope_Rep2 1044.52400966004 1044.52290993586 60.987 2 0.2661740892194511 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 71973 13784 MPWGDPNYRSA True PC9_epitope_Rep4 1292.5608061749201 1292.5597099358602 60.916 2 0.26617165281733557 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 49076 9926 KFSPNTSQF True PC9_epitope_Rep2 1054.5083595959002 1054.5072699358602 43.512 2 0.2661559450995414 0.00036105427849320016 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 48882 4838 KETAEAYLGK True NCI_RA007_Epitope_Rep2 1108.5764391557198 1108.57534993586 23.442 2 0.266116585901535 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 139438 13063 YTEPNYWIRY True H1975_Epitope_Rep2 1403.65100107831 1403.64990993586 55.369 2 0.26608442041830627 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion'] 94783 21896 RYLPTGSFPFL True PC9_epitope_Rep1 1296.6866583110398 1296.68556993586 89.036 2 0.26607017281600576 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 65388 8889 LSERADWQY True H1975_Epitope_Rep3 1166.5356369729 1166.53452993586 39.192 2 0.26606888081295954 0.00036105427849320016 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 22167 6487 ETAMVTADSKY True H1975_Epitope_Rep2 1214.54890407854 1214.5478099358602 29.868 2 0.2660407398134275 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 21362 15302 ERLQIDEQL True PC9_epitope_Rep3 1142.5931518490197 1142.5920499358601 64.011 2 0.2660139409243207 0.00036105427849320016 0.9438714419765777 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF', 'ENST00000492846.1_1_X:147022154-147024854:+|nuORF', 'TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1'] 114870 10736 TTDPYLTNSY True H1975_Epitope_Rep2 1173.5189838492502 1173.51788993586 46.323 2 0.2659635970431378 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 137221 12163 YLEQLHQLY True H1975_Epitope_Rep2 1205.60807363717 1205.6069699358602 51.871 2 0.2659476656549412 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 74560 9186 NLDDGIDDER True PC9_epitope_Rep1 1160.49456000656 1160.49346993586 40.184 2 0.26594690164874196 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 7135 11649 AQYEHDLEV True PC9_epitope_Rep5 1102.4931034545798 1102.49200993586 49.803 2 0.26593915049380035 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 106598 7823 SVYVYKVLK True NCI_RA007_Epitope_Rep4 1097.6484818971696 1097.64738993586 36.781 2 0.2659226775403698 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 35417 6472 GTDGQGGTFRY True H1975_Epitope_Rep2 1157.5101505010498 1157.50904993586 29.811 2 0.26586447833132537 0.00036105427849320016 0.9438714419765777 ['ENST00000487931.1_1_1:78444877-78481928:+|nuORF', 'ENSG00000162616|ENST00000370763|DNAJB4'] 65460 10018 LSFETTDESLR True NCI_RA007_Epitope_Rep4 1296.61976051968 1296.61866993586 45.378 2 0.26585014938753243 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 2155 5483 AEMAEEAQQQA True H1975_Epitope_Rep2 1204.50301651528 1204.50190993586 26.105 2 0.26582425626297157 0.00036105427849320016 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 139816 17672 YVDDTQFVRF True PC9_epitope_Rep6 1288.60880191316 1288.6077099358602 80.613 2 0.2658210753717625 0.00036105427849320016 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 139230 9274 YTADGKEVLEY True H1975_Epitope_Rep1 1286.6030478263801 1286.6019499358601 40.584 2 0.26575640254641714 0.00036105427849320016 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 138795 12754 YSDFPFHEDY True H1975_Epitope_Rep1 1318.51423282198 1318.5131299358602 54.118 2 0.26575329463396585 0.00036105427849320016 0.9438714419765777 ['ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF'] 47938 19423 IYYVDVQKF True PC9_epitope_Rep1 1173.6070110080097 1173.6059099358602 79.522 2 0.26575269540378527 0.00036105427849320016 0.9438714419765777 ['ENSG00000160410|ENST00000291842|SHKBP1'] 68791 14834 LVDPWTPHLY True H1975_Epitope_Rep2 1239.62880908175 1239.6277099358601 62.215 2 0.2657486945942382 0.00036105427849320016 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 77164 15725 NYFLWTEKF True NCI_RA007_Epitope_Rep3 1246.60225998074 1246.60116993586 69.495 2 0.2657483297908924 0.00036105427849320016 0.9438714419765777 ['ENSG00000100351|ENST00000344138|GRAP2'] 67119 11244 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 48.294 2 0.26571329234154406 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 53905 12631 KYIESPVLF True NCI_RA007_Epitope_Rep3 1094.60119735158 1094.60010993586 56.928 2 0.26571079572741957 0.00036105427849320016 0.9438714419765777 ['ENSG00000100304|ENST00000216129|TTLL12'] 14705 9104 DVQM[Oxidation]LQDAISK True H1975_Epitope_Rep1 1262.6176527251398 1262.6165499358601 39.922 2 0.2657001057578439 0.00036105427849320016 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 96853 4143 SESPKEPEQLR True NCI_RA007_Epitope_Rep2 1298.64664397386 1298.6449949037901 20.754 3 0.2656894122803803 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 137145 10790 YLDNVIGHSY True H1975_Epitope_Rep2 1179.55603806431 1179.5549499358601 46.531 2 0.265675384452585 0.00036105427849320016 0.9438714419765777 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'TRMT6|p.L275Ffs*10|1|0.1|ENSG00000089195|chr20:5942625-5942629|AAGAT/-|frameshift_variant', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 10863 11052 DALNIETAIK True H1975_Epitope_Rep3 1086.5920892198599 1086.59098993586 47.601 2 0.265648206760895 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 30061 18518 FYLEGGFSKF True PC9_epitope_Rep6 1193.57571087973 1193.57460993586 83.871 2 0.2656481760310849 0.00036105427849320016 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 97133 7632 SFETTEESLR True NCI_RA007_Epitope_Rep4 1197.55134660669 1197.5502499358602 36.009 2 0.2656470449500299 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 119309 7905 VELQELNDR True NCI_RA007_Epitope_Rep2 1114.5618517207397 1114.56074993586 35.382 2 0.26564471320668287 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 73931 14203 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69592490379 66.519 3 0.26563305093308376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 18468 13260 EKLEATINELV True H1975_Epitope_Rep3 1257.68163250025 1257.68052993586 56.263 2 0.26562824874799984 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 105002 11040 STIFYYVQK True NCI_RA007_Epitope_Rep5 1147.5913609438696 1147.59026993586 49.1 2 0.26561917328603896 0.00036105427849320016 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 6890 16479 AQIKPFYTV True PC9_epitope_Rep3 1065.5858816406098 1065.58478993586 68.523 2 0.26561518399731693 0.00036105427849320016 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 77380 14092 NYLSHHLTI True PC9_epitope_Rep5 1096.5665431783602 1096.5654499358602 59.216 2 0.26561195684628824 0.00036105427849320016 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 48596 5797 KEIEEYIHKP True H1975_Epitope_Rep3 1284.6714021697198 1284.66976490379 27.322 3 0.26560284521527744 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 139295 18864 YTDLLRLFEY True H1975_Epitope_Rep1 1331.67615319699 1331.6750499358602 78.663 2 0.265602138842905 0.00036105427849320016 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB'] 45455 15705 ISEENFRVM True PC9_epitope_Rep1 1123.53319444475 1123.53208993586 65.232 2 0.26559894337455325 0.00036105427849320016 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 117196 19741 TYTDVTPRQFF True PC9_epitope_Rep1 1373.6615657620098 1373.6604699358602 80.761 2 0.26557793578763855 0.00036105427849320016 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 19877 4214 ELVSDANQHVK True NCI_RA007_Epitope_Rep2 1238.6255146064602 1238.62387490379 21.03 3 0.26555905502142435 0.00036105427849320016 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 53099 8319 KSDVHLNFY True H1975_Epitope_Rep3 1121.55055876105 1121.54946993586 36.982 2 0.26554608260844437 0.00036105427849320016 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 104813 12939 STDVSDLLHQY True H1975_Epitope_Rep2 1276.5935457718401 1276.59244993586 54.884 2 0.2655401356909536 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 84566 15237 QHDFQAPYL True PC9_epitope_Rep4 1117.5192586327698 1117.5181699358602 66.539 2 0.26552681749677143 0.00036105427849320016 0.9438714419765777 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 69489 10739 LVSESSDVLPK True PC9_epitope_Rep2 1172.6288686514001 1172.6277699358602 46.626 2 0.26551484509322654 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 3191 6337 AGELTEDEVER True NCI_RA007_Epitope_Rep2 1246.5677249468197 1246.5666299358602 29.256 2 0.2655096327048311 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 89858 20645 RFLNDPGHLLW True PC9_epitope_Rep5 1366.7146043943799 1366.71295490379 84.464 3 0.26547502246110494 0.00036105427849320016 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 107131 16103 SYMLVNENRF True PC9_epitope_Rep4 1271.5968573304701 1271.59576993586 69.878 2 0.2654627827684845 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 111603 10218 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1189.6376598937302 1189.63656993586 44.246 2 0.2654360409569995 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 71563 7671 M[Oxidation]LDSHEELY True H1975_Epitope_Rep2 1151.48049054599 1151.4793899358601 34.458 2 0.26543381741334154 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 93982 10460 RVPELLHRL True PC9_epitope_Rep4 1131.68766137055 1131.68602490379 47.945 3 0.2654174809202775 0.00036105427849320016 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 65306 8000 LSEKPTVTTVY True H1975_Epitope_Rep3 1236.6601687796801 1236.65906993586 35.742 2 0.26541199011571043 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105854|Q15165-3|PON2', 'nc|ENSG00000105854|Q15165-1|PON2', 'ENSG00000105854|ENST00000222572|PON2'] 30057 20359 FYLEGGFSKF True PC9_epitope_Rep2 1193.57571087973 1193.57460993586 83.733 2 0.26539929664119777 0.00036105427849320016 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 53988 7600 KYLDNPNAL True NCI_RA007_Epitope_Rep3 1046.53965972418 1046.53856993586 37.028 2 0.26538285255977007 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 57846 7239 LEQDEYALR True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 32.818 2 0.26536532178848876 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138029|P55084-2|HADHB', 'ENSG00000138029|ENST00000317799|HADHB'] 76870 6574 NVIGLQM[Oxidation]GTNR True H1975_Epitope_Rep3 1217.61865578465 1217.61754993586 30.242 2 0.26536142833696585 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 53313 5092 KTNAIISLK True NCI_RA007_Epitope_Rep3 986.61243074162 986.61132993586 27.021 2 0.26534131331532607 0.00036105427849320016 0.9438714419765777 ['ENST00000539028.1_1_12:10010098-10010200:-|nuORF'] 10912 11254 DASVNFSEFSK True NCI_RA007_Epitope_Rep2 1229.5564319871298 1229.55532993586 48.362 2 0.26532745239304106 0.00036105427849320016 0.9438714419765777 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000559968.1_1_14:68082236-68082464:+|nuORF'] 126683 17110 VPRPAVLDPAL True PC9_epitope_Rep2 1146.67609362734 1146.6749899358601 71.063 2 0.2653116654357333 0.00036105427849320016 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 135427 10939 YDSYLGDDYVR True NCI_RA007_Epitope_Rep1 1364.5884603913998 1364.5873699358601 46.543 2 0.2652834472730638 0.00036105427849320016 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 133013 16032 VYVQHPITF True PC9_epitope_Rep1 1102.5811306133398 1102.58002993586 66.479 2 0.26524444580910506 0.00036105427849320016 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 70954 11502 M[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1214.5641606002998 1214.56306993586 49.227 2 0.2651788905678877 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 104870 5309 STESLQANVQR True NCI_RA007_Epitope_Rep1 1231.6156781987497 1231.61458993586 24.732 2 0.2651602623117516 0.00036105427849320016 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 94741 20591 RYLMDPDTFTF True PC9_epitope_Rep4 1404.6383877892797 1404.63728993586 87.355 2 0.2651466889825978 0.00036105427849320016 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 135580 6605 YEEIDNAPEER True NCI_RA007_Epitope_Rep1 1363.5891886673896 1363.5880899358601 29.706 2 0.26511551279654766 0.00036105427849320016 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 89357 8634 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 38.14 2 0.26509989985987475 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 137211 9511 YLEETSIRY True H1975_Epitope_Rep3 1172.57135377528 1172.5702499358601 41.59 2 0.2650940172556396 0.00036105427849320016 0.9438714419765777 ['ENSG00000158796|ENST00000368006|DEDD', 'nc|ENSG00000158796|O75618-2|DEDD'] 9786 20405 AYLESFYKF True PC9_epitope_Rep2 1166.5648118428599 1166.56370993586 83.913 2 0.2650593005914233 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 96747 9130 SEQLDLPVRQA True H1975_Epitope_Rep1 1254.65681473474 1254.6557099358602 40.024 2 0.26505091917975143 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF'] 104742 7950 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58028490379 35.549 3 0.2650498816837524 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 91120 9589 RLNDFASTVR True PC9_epitope_Rep5 1177.62036965637 1177.61872490379 41.845 3 0.26503826020074217 0.00036105427849320016 0.9438714419765777 ['ENSG00000178741|ENST00000322347|COX5A'] 117254 20090 TYYRGFLTL True PC9_epitope_Rep2 1132.59169529704 1132.5905899358602 82.685 2 0.26500966842616597 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'ENST00000554761.5_1_14:90397883-90418750:-|nuORF', 'ENST00000553871.5_1_14:90263589-90418750:-|nuORF', 'nc|ENSG00000140025|Q9BUY7-6|EFCAB11', 'ENST00000556639.5_1_14:90302986-90416480:-|nuORF'] 90922 13787 RLEIEPEWAY True H1975_Epitope_Rep3 1304.64010204144 1304.63900993586 58.334 2 0.2649940711119537 0.00036105427849320016 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 32139 14512 GFAFVTFDDHD True NCI_RA007_Epitope_Rep3 1269.5302172392899 1269.52912993586 64.389 2 0.26493706814180173 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 16011 11831 EEAENTLQSFR True PC9_epitope_Rep2 1322.61025846514 1322.60916993586 50.839 2 0.26490794527657163 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 62720 8922 LLYESPERY True H1975_Epitope_Rep1 1168.57643915572 1168.57534993586 39.224 2 0.2648911806024715 0.00036105427849320016 0.9438714419765777 ['ENSG00000168394|ENST00000354258|TAP1', 'nc|ENSG00000168394|Q03518-2|TAP1'] 132482 9896 VYPDGIRHI True PC9_epitope_Rep5 1068.5716285587998 1068.5705299358601 43.035 2 0.2648781566055636 0.00036105427849320016 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 37418 18105 GWEQLLTTIAR True NCI_RA007_Epitope_Rep2 1286.6982856239001 1286.69718993586 75.176 2 0.2648752060876835 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 95911 10136 SDVEAIFSK True NCI_RA007_Epitope_Rep2 994.49712620586 994.49602993586 44.015 2 0.2648467364594996 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 77332 14805 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.6069699358602 61.947 2 0.26481381902303686 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 80255 9596 PLDHLKPLEY True H1975_Epitope_Rep2 1223.65502382959 1223.65392993586 41.886 2 0.26481023403821236 0.00036105427849320016 0.9438714419765777 ['ENSG00000135763|ENST00000258243|URB2'] 132359 21070 VYMDWYEKF True PC9_epitope_Rep1 1279.5583465634297 1279.55724993586 85.878 2 0.2647814249906339 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 12994 13003 DLQFVEVTDVK True H1975_Epitope_Rep1 1291.6659824361102 1291.6648899358602 55.098 2 0.26477328053905197 0.00036105427849320016 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 25640 12369 FEWENKVTV True NCI_RA007_Epitope_Rep1 1150.56587447202 1150.56476993586 52.086 2 0.2647399174180387 0.00036105427849320016 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 116805 19467 TYLPTSPLL True PC9_epitope_Rep6 1003.55899818643 1003.55790993586 87.543 2 0.2647233812745293 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 94404 11527 RYFDPANGKF True PC9_epitope_Rep4 1213.5880068989297 1213.5869099358601 52.1 2 0.2647187141381817 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 48431 12892 KEEDVLKFLAA True H1975_Epitope_Rep3 1261.69180326113 1261.69015490379 54.814 3 0.26471412070130995 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 75393 5730 NQELQEINR True NCI_RA007_Epitope_Rep2 1142.5679997303398 1142.5669099358602 26.904 2 0.26471098233525203 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 65016 17313 LSDILRFIY True H1975_Epitope_Rep2 1138.63864548946 1138.63754993586 71.887 2 0.26469647841267346 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 56697 8298 LEAEIATYR True NCI_RA007_Epitope_Rep2 1064.55022440788 1064.54912993586 36.916 2 0.2646736214367151 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 14197 15865 DSTLIM[Oxidation]QLLR True H1975_Epitope_Rep3 1204.6485589305998 1204.64746993586 66.473 2 0.2646328407852299 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 112511 5681 TNYNDRYDEIR True NCI_RA007_Epitope_Rep5 1457.6535202594498 1457.65186490379 28.541 3 0.26463131892129177 0.00036105427849320016 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000492798.1_1_9:136217794-136218218:+|nuORF', 'ENST00000463740.5_1_9:136217403-136218218:+|nuORF', 'ENST00000541658.2_1_14:35704472-35704841:-|nuORF'] 103338 21351 SQVEEELFSV True PC9_epitope_Rep3 1165.55028397753 1165.54918993586 87.424 2 0.26462004369025816 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 140765 17047 YYRGNYMTF True PC9_epitope_Rep5 1213.52262976105 1213.5215299358601 70.59 2 0.26461146005915415 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 135559 6804 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 31.089 2 0.26458277052401075 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 134815 17468 WYQTKFETL True PC9_epitope_Rep4 1214.5971746002997 1214.5960699358602 75.187 2 0.2645778051017837 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 118662 9641 VEAQLQELQVK True NCI_RA007_Epitope_Rep1 1283.7085159544297 1283.7074099358601 41.501 2 0.26456251172403505 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 117136 18357 TYSPALNKMF True PC9_epitope_Rep5 1170.5743309807401 1170.5732299358601 75.627 2 0.26456171516280125 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 119116 6132 VEILANDQGNR True NCI_RA007_Epitope_Rep1 1227.6207635791898 1227.6196699358602 27.889 2 0.26455536105358435 0.00036105427849320016 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 74568 10714 NLDEEKQLLY True H1975_Epitope_Rep1 1263.63468230783 1263.63358993586 46.173 2 0.26454790614001306 0.00036105427849320016 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 53454 11051 KVIDPATATSV True PC9_epitope_Rep5 1100.607739284 1100.60664993586 47.495 2 0.2645411743249404 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 106282 5066 SVQSDQGYISR True NCI_RA007_Epitope_Rep3 1238.58912909774 1238.58802993586 26.919 2 0.2645390881535426 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 54514 15537 LAAEFLKQV True PC9_epitope_Rep6 1017.5858816406097 1017.58478993586 71.944 2 0.2644945051883328 0.00036105427849320016 0.9438714419765777 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000406551.2_1_6:150201187-150201547:+|nuORF'] 69487 11334 LVSESSDVLPK True PC9_epitope_Rep1 1172.6288686514001 1172.6277699358602 48.476 2 0.2644682220414248 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 105895 20851 SVLDDNKLLTL True PC9_epitope_Rep5 1229.68671788069 1229.68562993586 85.253 2 0.26445542487801094 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 53368 6997 KTYGEIFEK True NCI_RA007_Epitope_Rep2 1113.57062549929 1113.5695299358601 31.838 2 0.2644211223392695 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 74576 13552 NLDIIQQEY True H1975_Epitope_Rep3 1134.55570371114 1134.55460993586 57.41 2 0.26440491112334014 0.00036105427849320016 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 40580 13270 HTDDPLTWDY True H1975_Epitope_Rep2 1261.52513185885 1261.5240299358602 56.172 2 0.26439080223097194 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 119790 7546 VEVEGDNRYIA True H1975_Epitope_Rep1 1263.6095301891498 1263.6084299358602 34.02 2 0.2643283847044354 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 134356 10579 WSDYSDNLKY True H1975_Epitope_Rep2 1289.55643198713 1289.55532993586 45.714 2 0.2643120233129962 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196150|P15622-2|ZNF250', 'ENSG00000196150|ENST00000417550|ZNF250', 'nc|ENSG00000196150|P15622|ZNF250'] 54375 17749 KYQIINEEF True PC9_epitope_Rep3 1182.5920892198599 1182.59098993586 73.467 2 0.2642909523075613 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 12141 12015 DIISDTSGDFR True NCI_RA007_Epitope_Rep1 1224.5622456435601 1224.5611499358602 50.723 2 0.26428726598767605 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 106841 21820 SYIDLLQRF True PC9_epitope_Rep5 1153.6131590176099 1153.61206993586 88.964 2 0.2642869564318424 0.00036105427849320016 0.9438714419765777 ['ENSG00000127580|ENST00000293883|WDR24'] 131980 19134 VYGFQWRHF True PC9_epitope_Rep5 1238.5985120129797 1238.59687490379 78.633 3 0.2642852391255734 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 135213 10180 YAYDGKDYL True NCI_RA007_Epitope_Rep1 1106.4920408254197 1106.49094993586 43.609 2 0.2642755642668829 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 85040 19557 QIIRELQVL True PC9_epitope_Rep5 1110.67609362734 1110.6749899358601 80.276 2 0.26427230118266143 0.00036105427849320016 0.9438714419765777 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'MAP2K1|p.R108Q|1|0.29|ENSG00000169032|chr15:66436777-66436777|G/A|missense_variant', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 77349 20535 NYLHLDYNF True PC9_epitope_Rep3 1197.5454733806098 1197.54436993586 84.251 2 0.264234911777527 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 93797 4844 RTYVGSMPGR True NCI_RA007_Epitope_Rep4 1122.5604122520997 1122.55876490379 25.071 3 0.2642139843178183 0.00036105427849320016 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 130368 10920 VTVEKVIKI True PC9_epitope_Rep4 1027.6641319613097 1027.66302993586 49.773 2 0.2641996133641838 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 16557 7143 EEQLQQIRAE True NCI_RA007_Epitope_Rep1 1242.6204292260197 1242.6193299358602 31.775 2 0.26418857606282464 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 129265 13847 VTDPTGFLRM True H1975_Epitope_Rep2 1135.5695799534699 1135.56848993586 58.408 2 0.26415973572955 0.00036105427849320016 0.9438714419765777 ['ENSG00000100154|ENST00000397906|TTC28'] 87399 11449 QTDPVTLQY True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 49.093 2 0.2641523365875405 0.00036105427849320016 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 134771 10998 WYDNEFGYSNR True NCI_RA007_Epitope_Rep2 1449.5949427541698 1449.5938499358601 47.389 2 0.26413622418500665 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 104119 19943 SRYLNEFEEL True PC9_epitope_Rep1 1298.61428121642 1298.6131899358602 81.532 2 0.2641355201265365 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 101802 12288 SPIENIQRVA True PC9_epitope_Rep2 1125.6142216467701 1125.6131299358601 52.575 2 0.2641040395794335 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 73556 5742 NFSDNQLQEGK True H1975_Epitope_Rep3 1278.5840437173 1278.5829499358601 27.112 2 0.2640989242599118 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 88009 6698 QVSPEAGVQKV True PC9_epitope_Rep2 1140.6138872935999 1140.61278993586 31.171 2 0.26407939614051573 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 23538 17572 EWSPYTKIFQF True NCI_RA007_Epitope_Rep5 1444.7027022979998 1444.70160993586 74.376 2 0.2640692279259744 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 41316 18002 IAIYELLFK True NCI_RA007_Epitope_Rep5 1108.6532329244399 1108.65212993586 76.039 2 0.264067306744961 0.00036105427849320016 0.9438714419765777 ['ENSG00000124614|ENST00000648437|RPS10', 'chr6:34425221-34425583|502|33.66|0.0|21.68|-|ENST00000494077|RPS10-NUDT3,RPS10'] 135527 9331 YEEDSYSHIMA True H1975_Epitope_Rep2 1343.53398229039 1343.53288993586 40.852 2 0.26405565396565134 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 65459 9775 LSFETTDESLR True NCI_RA007_Epitope_Rep3 1296.61976051968 1296.61866993586 45.516 2 0.26405004720892594 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 7829 10560 [Acetylation]-ATAEVLNIGKK True NCI_RA007_Epitope_Rep1 1184.6764878664596 1184.67538993586 45.061 2 0.2639929320842711 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 67158 5617 LTDEQYQAVR True H1975_Epitope_Rep3 1221.59896550545 1221.5978699358602 26.642 2 0.2639694412972763 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD', 'nc|ENSG00000103490|Q9ULZ3-3|PYCARD', 'ENST00000565022.1_1_16:31212908-31213633:-|nuORF'] 107141 15553 SYMPTVSHL True PC9_epitope_Rep1 1033.49026700361 1033.4891699358602 64.648 2 0.2639671762253133 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 58664 11029 LFHPEQLITGK True NCI_RA007_Epitope_Rep2 1281.7081220316097 1281.70648490379 47.501 3 0.2639545170525286 0.00036105427849320016 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 85810 4635 QLYWSHPRK True NCI_RA007_Epitope_Rep4 1213.6356257976897 1213.6345299358602 24.244 2 0.26395104989652246 0.00036105427849320016 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 77257 17006 NYIPRFWTF True NCI_RA007_Epitope_Rep4 1242.6185787512197 1242.61748993586 73.694 2 0.2639432413790835 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 24074 21245 EYQKVWNLF True PC9_epitope_Rep1 1225.6131590176099 1225.61206993586 86.543 2 0.263931557016729 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 96432 6696 SEIGAITRSA True H1975_Epitope_Rep2 1003.52982331647 1003.52872993586 30.666 2 0.26393141697240813 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'ENSG00000134775|ENST00000590592|FHOD3'] 69227 9104 LVNEVTEFAK True NCI_RA007_Epitope_Rep3 1148.607739284 1148.60664993586 42.895 2 0.2639285765678563 0.00036105427849320016 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB'] 136104 13200 YGEPGEVFINK True PC9_epitope_Rep4 1251.6135529404298 1251.61244993586 58.673 2 0.2639192131820228 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 124277 10445 VLDEADLSRY True H1975_Epitope_Rep3 1179.57716743171 1179.57606993586 45.236 2 0.26389511664725296 0.00036105427849320016 0.9438714419765777 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1'] 72420 7595 MTERQDLVY True H1975_Epitope_Rep2 1153.5437591284497 1153.5426699358602 34.166 2 0.263889336078525 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5'] 131835 18393 VYAQVARLF True PC9_epitope_Rep4 1065.5971150306498 1065.5960099358601 78.813 2 0.26388409156688025 0.00036105427849320016 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 2335 4549 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 22.606 2 0.2638831126608993 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 2317 5481 AEQAERYDEM True H1975_Epitope_Rep2 1240.50301651528 1240.50190993586 26.097 2 0.2638755833043846 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 104461 8555 SSLNLRETNLD True NCI_RA007_Epitope_Rep5 1260.63099390972 1260.62988993586 39.591 2 0.26384037463513715 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 43637 19907 IILEEGKEILV True PC9_epitope_Rep1 1254.7435044808199 1254.74240993586 81.39 2 0.2638375964202619 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 137562 4975 YLSEVASGDNK True H1975_Epitope_Rep3 1181.5564319871298 1181.55532993586 24.264 2 0.26382721069531984 0.00036105427849320016 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF'] 69356 16777 LVQAFQFTDK True PC9_epitope_Rep3 1195.62372370131 1195.62262993586 69.678 2 0.26382710232300105 0.00036105427849320016 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 93870 7945 RVFVVGVGMTK True NCI_RA007_Epitope_Rep3 1191.67979910879 1191.67816490379 38.359 3 0.2638184690702274 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 57419 8135 LEIIGNSKNVA True H1975_Epitope_Rep2 1156.64518742188 1156.6440899358602 36.241 2 0.26381750796403797 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 28656 14747 FSSPHLVQV True PC9_epitope_Rep2 1012.5341804209198 1012.53308993586 61.991 2 0.26381591780338565 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 93517 4353 RSMEAHNILSK True NCI_RA007_Epitope_Rep4 1284.66085456936 1284.65920490379 23.089 3 0.2638123203281786 0.00036105427849320016 0.9438714419765777 ['ENST00000378725.3_1_1:1480120-1509937:-|nuORF', 'ENSG00000160075|ENST00000291386|SSU72', 'nc|ENSG00000160075|Q9NP77-2|SSU72'] 105054 19472 STIRLLTSL True PC9_epitope_Rep2 1002.60734536118 1002.60624993586 80.279 2 0.2638101336970405 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 60745 4128 LKDDEVAQLKK True NCI_RA007_Epitope_Rep4 1285.7241660185698 1285.7225249037901 22.165 3 0.2637532561017652 0.00036105427849320016 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 69494 10229 LVSESSDVLPK True PC9_epitope_Rep4 1172.6288686514001 1172.6277699358602 47.024 2 0.26372314882053316 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 3550 9216 AGNEDIITLR True H1975_Epitope_Rep3 1100.5825871653199 1100.5814899358602 40.441 2 0.2637157142025872 0.00036105427849320016 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA'] 46238 9329 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 40.845 2 0.26370923351513864 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 24079 19003 EYQKVWNLF True PC9_epitope_Rep6 1225.6131590176099 1225.61206993586 85.738 2 0.26366594402385995 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 23541 22069 EWSPYTKIFQF True PC9_epitope_Rep3 1444.7027022979998 1444.70160993586 90.185 2 0.2636233728433175 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 36039 8323 GVDSSIFQNPK True NCI_RA007_Epitope_Rep3 1190.59315184902 1190.5920499358601 39.856 2 0.26361505413714337 0.00036105427849320016 0.9438714419765777 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 18297 12250 EITALAPSTMK True PC9_epitope_Rep2 1160.61111041228 1160.61000993586 52.43 2 0.26358462591854503 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77259 22054 NYIPRFWTF True PC9_epitope_Rep1 1242.6185787512197 1242.61748993586 89.643 2 0.26357898019230735 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 54443 13516 KYTKIFNDF True PC9_epitope_Rep4 1174.60225998074 1174.60116993586 59.885 2 0.2635766004028768 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 108829 4770 TEQQQRFHEI True H1975_Epitope_Rep2 1314.6316626160599 1314.63001490379 23.437 3 0.26355544019337396 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 135522 9940 YEEDAHITFA True H1975_Epitope_Rep2 1194.51931820242 1194.51822993586 43.223 2 0.2635537945821989 0.00036105427849320016 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'nc|ENSG00000183054|Q99666-2|RGPD5', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 105915 19690 SVLDQKILL True PC9_epitope_Rep2 1027.62774645259 1027.62664993586 81.124 2 0.2635229137563674 0.00036105427849320016 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 94436 5319 RYFKTPRKF True NCI_RA007_Epitope_Rep4 1241.7033114346898 1241.70166490379 27.021 3 0.26351876814484676 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 101705 5942 SPGLQKEAV True PC9_epitope_Rep1 927.5025459394699 927.50144993586 27.67 2 0.26350747692223325 0.00036105427849320016 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 5794 13219 APFDLFENR True H1975_Epitope_Rep1 1107.53490869691 1107.53380993586 55.944 2 0.2634910330391982 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'HSP90AA1|p.R346H|1|0.5|ENSG00000080824|chr14:102084509-102084509|C/T|missense_variant'] 52727 13233 KQLDDLKVEL True PC9_epitope_Rep6 1199.6761531969898 1199.6745149037902 62.554 3 0.26349093458896733 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 22306 15851 ETEEDKFLLLY True H1975_Epitope_Rep1 1398.6918628307799 1398.69076993586 66.278 2 0.2634788125067629 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 107307 9512 SYRDSYESY True PC9_epitope_Rep5 1168.4672826295598 1168.46618993586 41.546 2 0.2634551347766394 0.00036105427849320016 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 91622 11942 RPFEDQTSL True PC9_epitope_Rep1 1091.52473793603 1091.52364993586 50.8 2 0.2634439292459435 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 131915 9146 VYERELQTF True NCI_RA007_Epitope_Rep3 1183.5873381925899 1183.58624993586 43.062 2 0.263424676721471 0.00036105427849320016 0.9438714419765777 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 112460 5647 TNQELQEINR True H1975_Epitope_Rep3 1243.61567819875 1243.61458993586 26.751 2 0.2634129233957144 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 28435 8416 FSEEQLNRY True H1975_Epitope_Rep2 1184.5462016565998 1184.5451099358602 37.327 2 0.2634073354597522 0.00036105427849320016 0.9438714419765777 ['ENSG00000064995|ENST00000361288|TAF11', 'nc|ENSG00000064995|Q15544-2|TAF11'] 104285 12086 SSEELLSLKY True H1975_Epitope_Rep3 1167.60231955039 1167.6012299358601 51.654 2 0.2633504814270962 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 118217 15225 VAYEEFEKV True PC9_epitope_Rep5 1112.5389910178399 1112.5378899358602 63.572 2 0.2633337268034895 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 123508 10841 VIHDNFGIVEG True NCI_RA007_Epitope_Rep2 1198.59823722946 1198.5971499358602 46.773 2 0.26330989795757004 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 56572 9876 LDVTSVEDYK True H1975_Epitope_Rep1 1167.5659340416698 1167.5648299358602 42.921 2 0.26330573396855395 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000432974.1_1_13:79483649-79483910:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 33976 18517 GNFNYIEFTR True PC9_epitope_Rep2 1259.5934862021898 1259.5923899358602 76.57 2 0.2633054311972423 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 120514 17827 VFYPYPQYF True NCI_RA007_Epitope_Rep5 1222.5698972232997 1222.5688099358601 75.368 2 0.2632731994104896 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 74977 21442 NLVRELLAV True PC9_epitope_Rep1 1025.6233297784897 1025.62222993586 87.315 2 0.26326542533019615 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 63013 8852 LNGTDPEDVIR True NCI_RA007_Epitope_Rep2 1227.60953018915 1227.6084299358602 39.08 2 0.26325429048654914 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 14873 22862 DYFFKPVLF True PC9_epitope_Rep5 1174.60628273202 1174.6051899358602 92.936 2 0.2632172823555205 0.00036105427849320016 0.9438714419765777 ['ENST00000369452.8_1_10:112723943-112724024:+|nuORF'] 98947 12666 SIYYITGESK True PC9_epitope_Rep3 1159.57610480255 1159.5750099358602 53.745 2 0.2632139093096455 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 94396 13755 RYFDPANGKF True PC9_epitope_Rep1 1213.5880068989297 1213.5869099358601 57.754 2 0.2632106518347603 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 112459 5548 TNQELQEINR True H1975_Epitope_Rep3 1243.61567819875 1243.61458993586 26.386 2 0.26320728441912605 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 128418 5957 VSEEDVSSRY True H1975_Epitope_Rep2 1169.52004647841 1169.51894993586 27.895 2 0.2631995209733784 0.00036105427849320016 0.9438714419765777 ['ENSG00000177425|ENST00000328827|PAWR'] 53295 21664 KTLDWEIVEL True PC9_epitope_Rep1 1244.66525416012 1244.66414993586 88.159 2 0.2631992211483909 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1'] 136106 14431 YGEPGEVFINK True PC9_epitope_Rep5 1251.6135529404298 1251.61244993586 60.508 2 0.2631868879624316 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 24760 14371 FAYDGKDYLTL True H1975_Epitope_Rep2 1304.6288686513997 1304.6277699358602 60.427 2 0.26316759925897826 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 109705 19258 THFIQAGLLSA True PC9_epitope_Rep5 1156.62405805448 1156.62296993586 79.117 2 0.26316160361549673 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 73915 15615 NHIEPLKIQL True PC9_epitope_Rep2 1203.6975573479099 1203.69592490379 65.34 3 0.2630913598207307 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 31155 11071 GDEELDSLIK True H1975_Epitope_Rep3 1117.5502839775297 1117.54918993586 47.677 2 0.26308284552932804 0.00036105427849320016 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 135424 10163 YDSYLGDDYVR True H1975_Epitope_Rep1 1364.5884603913998 1364.5873699358601 44.031 2 0.26305799691108733 0.00036105427849320016 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 114914 8033 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51807496793 35.849 1 0.26303923001626056 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 7601 7634 ASIHEAWTDGK True PC9_epitope_Rep1 1213.57275075761 1213.57111490379 34.186 3 0.2630233686395233 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 22287 6150 ETDSSEEISRY True H1975_Epitope_Rep2 1314.5575541859398 1314.5564499358602 28.628 2 0.26301832941270104 0.00036105427849320016 0.9438714419765777 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129805634-129873545:-|nuORF'] 114339 6826 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 31.174 2 0.263016729670299 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 49471 22020 KIWEELSVLEV True PC9_epitope_Rep5 1343.73366807311 1343.73256993586 89.726 2 0.2629908724126963 0.00036105427849320016 0.9438714419765777 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|245|11.93|0.02|9.4|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3'] 25315 20179 FEELNADLFR True PC9_epitope_Rep3 1252.6088019131598 1252.6077099358602 82.875 2 0.2629833385004079 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 77262 20919 NYIPRFWTF True PC9_epitope_Rep4 1242.6185787512197 1242.61748993586 88.624 2 0.2629818526966862 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 64562 9913 LRDLEDSLAR True PC9_epitope_Rep2 1186.6305999868998 1186.6289549037901 43.463 3 0.2629810942556354 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 132368 19966 VYM[Oxidation]DWYEKF True PC9_epitope_Rep5 1295.55326156343 1295.55216993586 81.851 2 0.2629670854012266 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 89205 16332 REIFLSQPILL True H1975_Epitope_Rep3 1327.7863723523099 1327.78526993586 68.295 2 0.26295522762963397 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 56136 11242 LDM[Oxidation]DSIIAEVK True H1975_Epitope_Rep1 1248.6271547796798 1248.62604993586 48.218 2 0.2629392751709349 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 47469 12525 IYKAPSENW True PC9_epitope_Rep5 1106.53965972418 1106.53856993586 53.176 2 0.2629296065504745 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 70938 14763 MELQEMQLK True PC9_epitope_Rep5 1148.5569666644399 1148.55586993586 61.785 2 0.26290246276320334 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF'] 70443 20205 LYRLQFNEF True PC9_epitope_Rep2 1228.6240580544797 1228.62296993586 83.135 2 0.26287256155263344 0.00036105427849320016 0.9438714419765777 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 36042 8687 GVDSSIFQNPK True NCI_RA007_Epitope_Rep5 1190.59315184902 1190.5920499358601 40.079 2 0.2628433338626415 0.00036105427849320016 0.9438714419765777 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 73894 7132 NHHLQETSF True PC9_epitope_Rep5 1111.50467119779 1111.50356993586 32.403 2 0.26282572417684796 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 113660 15060 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61225490379 63.185 3 0.2628155588965783 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 116759 11885 TYLEKAIKI True PC9_epitope_Rep6 1077.6433965167298 1077.6422899358602 56.944 2 0.2627924737531329 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 104712 8550 STDGEVETQVY True H1975_Epitope_Rep2 1226.53027680894 1226.5291699358602 37.843 2 0.26276741434224304 0.00036105427849320016 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR'] 93674 13241 RTIFPLFMK True NCI_RA007_Epitope_Rep4 1151.6525217317899 1151.65142993586 58.063 2 0.26275319365361405 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1', 'ENST00000473857.5_1_20:36384780-36460672:+|nuORF', 'nc|ENSG00000132792|Q8WYA6-3|CTNNBL1', 'nc|ENSG00000132792|Q8WYA6-2|CTNNBL1'] 7855 9127 ATALEYVYK True NCI_RA007_Epitope_Rep3 1056.54916177872 1056.5480699358602 42.988 2 0.26274861474405403 0.00036105427849320016 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 132445 10344 VYNSEYYHF True NCI_RA007_Epitope_Rep3 1220.5138388991602 1220.51274993586 47.752 2 0.26274230520259 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 26215 14503 FHVEPGLQRL True PC9_epitope_Rep1 1194.6509415086598 1194.6493049037902 60.611 3 0.2627225739224727 0.00036105427849320016 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 97569 6202 SGVSLAALKK True NCI_RA007_Epitope_Rep4 972.59678067748 972.59568993586 30.466 2 0.26270256888360055 0.00036105427849320016 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 118590 8027 VEAFQTTISK True NCI_RA007_Epitope_Rep1 1122.5920892198599 1122.59098993586 35.219 2 0.2627016014122619 0.00036105427849320016 0.9438714419765777 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000442824.1_1_5:97549420-97549822:+|nuORF', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000559359.1_1_14:24613399-24613677:-|nuORF', 'ENST00000453033.1_1_13:49345602-49345743:+|nuORF'] 68727 8080 LVDEYSLNAGK True H1975_Epitope_Rep3 1207.6084675599898 1207.60736993586 36.054 2 0.26268996234685393 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 18684 7313 ELDAVQREY True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 33.069 2 0.26267990850995365 0.00036105427849320016 0.9438714419765777 ['ENSG00000080986|ENST00000261597|NDC80'] 87441 11483 QTELENQLEY True H1975_Epitope_Rep2 1265.5775613545297 1265.5764699358601 49.225 2 0.26267730045072196 0.00036105427849320016 0.9438714419765777 ['ENSG00000135090|ENST00000392533|TAOK3'] 116821 18587 TYLVDMQRF True PC9_epitope_Rep4 1171.5695799534699 1171.56848993586 79.57 2 0.26264815258502033 0.00036105427849320016 0.9438714419765777 ['ENSG00000180340|ENST00000315323|FZD2'] 47400 12719 IYIKHPHLF True PC9_epitope_Rep2 1166.66004964038 1166.6584049037901 54.23 3 0.26262273189577406 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 17712 17000 EHSLVIDTL True PC9_epitope_Rep2 1025.53932537101 1025.53822993586 70.641 2 0.2626186535769577 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 45218 17091 IRKPYIWEY True PC9_epitope_Rep5 1266.67609362734 1266.6749899358601 70.762 2 0.2626182206561681 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 106099 19875 SVNDIFERI True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 81.843 2 0.2625917710567404 0.00036105427849320016 0.9438714419765777 ['H2BC8|p.F66S|1|0.36|ENSG00000273802|chr6:26216447-26216447|A/G|missense_variant'] 87687 9173 QVDNSLITKY True H1975_Epitope_Rep2 1179.6135529404298 1179.61244993586 40.237 2 0.26259009288242807 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'PRR14L|p.P1996Qfs*42|1|0.37|ENSG00000183530|chr22:31703563-31703563|G/-|frameshift_variant', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 101811 13540 SPIENIQRVAA True PC9_epitope_Rep1 1196.6513354314802 1196.6502299358601 56.938 2 0.26258555151150925 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 28265 12179 FRVKYETEL True PC9_epitope_Rep2 1183.62372370131 1183.62262993586 52.158 2 0.26258424655033547 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 22228 13335 ETDLLDIRSEY True H1975_Epitope_Rep2 1352.64597526752 1352.64486993586 56.425 2 0.2625803460109235 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 42632 8482 IETLTQQLQAK True H1975_Epitope_Rep1 1271.7085159544301 1271.7074099358601 37.555 2 0.2625595507485536 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 99526 5618 SLETENAGLR True NCI_RA007_Epitope_Rep5 1088.5462016566 1088.5451099358602 28.298 2 0.26254350485683264 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 24197 9939 EYVEKFYRI True NCI_RA007_Epitope_Rep4 1245.6393737654498 1245.63826993586 45.074 2 0.2625361318591858 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 73916 15708 NHIEPLKIQL True PC9_epitope_Rep2 1203.6975573479099 1203.69592490379 65.695 3 0.26253405664347507 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 132145 8921 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 39.673 3 0.2625283123222884 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 41013 17482 HYGLPVVV True PC9_epitope_Rep2 882.49633836022 882.49524993586 72.5 2 0.26251267342014123 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 54306 22035 KYPSPFFVF True PC9_epitope_Rep1 1130.5800679841798 1130.5789699358602 89.572 2 0.26250883419375787 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 67154 13820 LTDEQIRFLY True H1975_Epitope_Rep2 1296.67140216972 1296.6703099358601 58.307 2 0.26250476328664274 0.00036105427849320016 0.9438714419765777 ['ENSG00000183808|ENST00000520560|RBM12B'] 130676 9954 VVDEDHELIY True H1975_Epitope_Rep3 1230.5768330785402 1230.5757299358602 43.321 2 0.262449087187977 0.00036105427849320016 0.9438714419765777 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 12087 15011 DIFEAQIAGLR True NCI_RA007_Epitope_Rep1 1231.6560864587498 1231.6549899358602 62.454 2 0.2624274547515444 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 58551 20070 LFDQAFGLPR True PC9_epitope_Rep2 1162.6134933707797 1162.6123899358602 82.605 2 0.2624254654847472 0.00036105427849320016 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 103876 11644 SRLEQEIATYR True PC9_epitope_Rep2 1364.7048275563197 1364.70319490379 50.115 3 0.26241764081645175 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001'] 26584 8391 FKDLGEEHFK True PC9_epitope_Rep5 1248.6138872935996 1248.61225490379 37.218 3 0.2624106328174289 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 3189 5886 AGELTEDEVER True H1975_Epitope_Rep3 1246.5677249468197 1246.5666299358602 27.65 2 0.26236162453486206 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 57016 10580 LEEELGRDWQA True H1975_Epitope_Rep2 1344.6309939097198 1344.62988993586 45.718 2 0.2623219024905868 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000123815|Q96D53-2|COQ8B', 'ENSG00000123815|ENST00000324464|COQ8B'] 53725 15150 KYEELFPAF True NCI_RA007_Epitope_Rep4 1142.5648118428596 1142.56370993586 65.858 2 0.26229477657687056 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 53571 5341 KVTEGSFVYK True NCI_RA007_Epitope_Rep3 1156.61282466444 1156.61116490379 28.017 3 0.2622896340842596 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 25182 11090 FDVSGYPTLK True NCI_RA007_Epitope_Rep2 1125.57062549929 1125.5695299358601 47.718 2 0.2622814463403212 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 14057 9571 DSDINNRLVY True H1975_Epitope_Rep2 1207.58331544131 1207.5822099358602 41.789 2 0.26227650545269326 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170291|Q8TE02-1|ELP5', 'nc|ENSG00000170291|Q8TE02-2|ELP5', 'ENSG00000170291|ENST00000396628|ELP5', 'nc|ENSG00000170291|Q8TE02-3|ELP5'] 103003 14307 SQITAIEAQHL True PC9_epitope_Rep2 1209.63535101417 1209.63424993586 60.296 2 0.2622279305865706 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 72122 12636 MRDVMQQQL True PC9_epitope_Rep5 1147.54779896307 1147.54670993586 53.607 2 0.26222416733333737 0.00036105427849320016 0.9438714419765777 ['ENSG00000176619|ENST00000325327|LMNB2'] 76362 13363 NSFVNDIFER True H1975_Epitope_Rep1 1239.5884008217497 1239.58730993586 56.51 2 0.2622239208993311 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 54305 21942 KYPSPFFVF True PC9_epitope_Rep1 1130.5800679841798 1130.5789699358602 89.218 2 0.2622185385109875 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 114907 7740 TTEVHPELY True H1975_Epitope_Rep1 1087.5185899264297 1087.51748993586 34.732 2 0.2622136682880323 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 93904 17578 RVIEGDVVSAL True PC9_epitope_Rep3 1156.6451874218799 1156.6440899358602 72.802 2 0.2622131475354428 0.00036105427849320016 0.9438714419765777 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 94891 7733 RYPDNLKHL True PC9_epitope_Rep3 1154.61964138038 1154.61799490379 34.739 3 0.26220785279203096 0.00036105427849320016 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 69354 11444 LVQAFQFTDK True NCI_RA007_Epitope_Rep1 1195.62372370131 1195.62262993586 48.479 2 0.26219955945377277 0.00036105427849320016 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 69922 19281 LYDIILKNF True PC9_epitope_Rep6 1137.64339651673 1137.6422899358602 86.811 2 0.26219560191083596 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 2333 4366 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 21.907 2 0.26217396887411465 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 49459 8594 KITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep5 1246.62273800457 1246.6216499358602 39.734 2 0.26216894160715004 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 82152 16839 PTDYADIMMGY True H1975_Epitope_Rep1 1275.51516142211 1275.51406993586 70.181 2 0.26216008102907384 0.00036105427849320016 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 108083 11044 TDLLLEPYNK True H1975_Epitope_Rep3 1204.6339540318397 1204.6328499358601 47.57 2 0.26214801084741013 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 127402 14525 VQQTVQDLFGR True PC9_epitope_Rep6 1289.67279915205 1289.67170993586 67.76 2 0.26214623529406744 0.00036105427849320016 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 76553 11086 NTDPWAGYRY True H1975_Epitope_Rep2 1241.5465360097699 1241.54542993586 47.677 2 0.2621433631652029 0.00036105427849320016 0.9438714419765777 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 14109 7949 DSDYHDENM[Oxidation]YY True H1975_Epitope_Rep2 1466.4932400576602 1466.4921499358602 35.525 2 0.26212835990536304 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 68663 16359 LVAVELEKV True PC9_epitope_Rep1 998.6011973515799 998.60010993586 67.745 2 0.26212079007623484 0.00036105427849320016 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 16558 6328 EEQLQQIRAE True NCI_RA007_Epitope_Rep3 1242.6204292260197 1242.6193299358602 31.896 2 0.26210609939041773 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 32136 19815 GFAFVQYVNER True PC9_epitope_Rep3 1328.65133543148 1328.6502299358601 81.451 2 0.26210351741233406 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC'] 89015 10248 REEDPYMDTTL True H1975_Epitope_Rep1 1368.5867461392397 1368.5856499358601 44.363 2 0.2621018908971644 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 47526 21303 IYLPYLHEW True PC9_epitope_Rep2 1232.62299542532 1232.62188993586 87.406 2 0.262093728147573 0.00036105427849320016 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 67117 11274 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.5811499358601 48.342 2 0.26208415981321426 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 59063 8465 LGDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep1 1269.55471811541 1269.55362993586 36.926 2 0.26202478659574285 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 108086 16328 TDLLLEPYNK True PC9_epitope_Rep2 1204.6339540318397 1204.6328499358601 68.052 2 0.2619721142480679 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 48380 2763 KEAPAPPKA True H1975_Epitope_Rep2 907.5127167003499 907.51160993586 14.656 2 0.26196760008129155 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000582736.1_1_17:27047023-27047984:+|nuORF', 'RPL23A|p.G31Efs*34|1|0.1|ENSG00000198242|chr17:28720770-28720792|AAGGTGTCCACAGCCACAAAAAG/-|frameshift_variant', 'ENST00000399247.6_1_6:29694709-29694913:-|nuORF', 'ENST00000606975.1_1_8:163470-182153:-|nuORF'] 48465 8635 KEELTLEGIR True NCI_RA007_Epitope_Rep1 1186.65575210558 1186.65409490379 37.59 3 0.26195659168599233 0.00036105427849320016 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 49361 6938 KIFVGGIKEN True NCI_RA007_Epitope_Rep4 1103.6338944621898 1103.63278993586 33.31 2 0.2618948158945548 0.00036105427849320016 0.9438714419765777 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 104993 8975 STIEYVIQR True NCI_RA007_Epitope_Rep5 1107.59242357303 1107.5913299358601 41.18 2 0.26187784285967514 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 25152 11281 FDQLLAEEK True PC9_epitope_Rep4 1091.5498900547097 1091.5487899358602 51.169 2 0.26185944680031353 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 74561 8457 NLDDGIDDER True PC9_epitope_Rep2 1160.49456000656 1160.49346993586 37.898 2 0.2618556187896989 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 131902 16685 VYEGPELNHAF True PC9_epitope_Rep5 1274.59315184902 1274.5920499358601 69.182 2 0.26184228904777274 0.00036105427849320016 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant'] 7718 4771 ASREEILAQAK True PC9_epitope_Rep4 1214.66190011518 1214.66026490379 24.923 3 0.26181603137960274 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 18751 14906 ELDPLTGEWHY True H1975_Epitope_Rep3 1358.61428121642 1358.6131899358602 62.723 2 0.2618034816586785 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 47593 21387 IYNGKLFDLL True PC9_epitope_Rep2 1194.6648602373 1194.66376993586 87.736 2 0.2617775142755514 0.00036105427849320016 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 67396 9656 LTDYLKNTY True H1975_Epitope_Rep2 1129.56554011885 1129.56444993586 42.122 2 0.26174487105940186 0.00036105427849320016 0.9438714419765777 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000461836.5_1_2:162903409-162929972:-|nuORF'] 71968 14367 MPWGDPNYRSA True PC9_epitope_Rep2 1292.5608061749201 1292.5597099358602 60.524 2 0.26172573544825434 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 26673 9438 FLDANVKESY True H1975_Epitope_Rep2 1184.57135377528 1184.5702499358601 41.272 2 0.2617130878150396 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000289758|Q92902-4|HPS1', 'ENSG00000107521|ENST00000361490|HPS1', 'nc|ENSG00000289758|Q92902-2|HPS1'] 46239 9432 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 41.247 2 0.26170429655842437 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 22288 6245 ETDSSEEISRY True H1975_Epitope_Rep3 1314.5575541859398 1314.5564499358602 29.033 2 0.26168159772603916 0.00036105427849320016 0.9438714419765777 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129805634-129873545:-|nuORF'] 48871 6720 KESYSVYVYK True H1975_Epitope_Rep3 1264.6339540318397 1264.63231490379 30.805 3 0.2616641115919335 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 56062 16172 LDLDGIIAEVK True H1975_Epitope_Rep3 1184.66525416012 1184.66414993586 67.663 2 0.2616640552463736 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 26786 10587 FLDSTGSRLDY True H1975_Epitope_Rep3 1272.59863115228 1272.5975299358602 45.792 2 0.2616516395743058 0.00036105427849320016 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 13804 7779 DQVANSAFVER True NCI_RA007_Epitope_Rep1 1234.59421447818 1234.5931099358602 34.249 2 0.2616200979690442 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 86477 19176 QQVQRLPFL True PC9_epitope_Rep2 1127.64512785223 1127.64402993586 79.133 2 0.2616152174862707 0.00036105427849320016 0.9438714419765777 ['ENSG00000132963|ENST00000380842|POMP'] 69217 11357 LVNELTEFAK True NCI_RA007_Epitope_Rep5 1162.6233893481399 1162.6222899358602 50.336 2 0.2616133769258608 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 61458 20518 LLFEGEKITI True PC9_epitope_Rep2 1161.6645258841297 1161.6634299358602 84.353 2 0.2616064979586019 0.00036105427849320016 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000168255|ENST00000513506|POLR2J3'] 68720 9745 LVDEPQNLIK True NCI_RA007_Epitope_Rep2 1167.6499384491499 1167.6488499358602 42.527 2 0.26160119664458487 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 124429 12150 VLELVSITANK True NCI_RA007_Epitope_Rep1 1185.69688864157 1185.6957899358601 51.235 2 0.2615846844038986 0.00036105427849320016 0.9438714419765777 ['ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000556798.1_1_12:57627435-57627797:+|nuORF', 'ENST00000554467.5_1_12:57627324-57627898:+|nuORF'] 133016 15307 VYVQHPITF True PC9_epitope_Rep2 1102.5811306133398 1102.58002993586 64.16 2 0.2615770861899374 0.00036105427849320016 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 8136 9094 ATEVDSRWQEY True H1975_Epitope_Rep2 1382.6102584651399 1382.60916993586 39.931 2 0.26157636094345194 0.00036105427849320016 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000485063.1_1_1:39748843-39749872:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 114341 6585 TSDDVKEQIY True H1975_Epitope_Rep3 1196.55609763396 1196.5550099358602 30.284 2 0.26155759796181927 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 15165 8938 EAESSPFVER True PC9_epitope_Rep1 1149.5302172392899 1149.52912993586 39.221 2 0.26154567783021004 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 22309 16000 ETEEDKFLLLY True H1975_Epitope_Rep2 1398.6918628307799 1398.69076993586 66.743 2 0.26151983172099924 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 94710 8373 RYLEQLHQL True NCI_RA007_Epitope_Rep5 1198.64585612822 1198.64422490379 38.88 3 0.26149482131898666 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 138080 8178 YQEFTDHLVK True NCI_RA007_Epitope_Rep1 1278.6244519772997 1278.6228149037902 35.808 3 0.2614443575418532 0.00036105427849320016 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF'] 54366 11746 KYQIINEEF True NCI_RA007_Epitope_Rep1 1182.5920892198599 1182.59098993586 49.666 2 0.26142760615420185 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 54279 8939 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 39.742 3 0.26139556998460317 0.00036105427849320016 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 67205 9496 LTDITKGVQY True H1975_Epitope_Rep2 1136.607739284 1136.60664993586 41.495 2 0.2613316236739363 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 54783 8225 LAEVEAALEK True H1975_Epitope_Rep1 1071.5811901829898 1071.58008993586 36.581 2 0.2613142114925981 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 106284 5230 SVQSDQGYISR True NCI_RA007_Epitope_Rep4 1238.58912909774 1238.58802993586 26.655 2 0.2613097046864012 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 27327 10516 FMDPEMETRY True H1975_Epitope_Rep3 1317.53695949585 1317.53586993586 45.513 2 0.261235616076536 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138031|O60266-2|ADCY3', 'ENSG00000138031|ENST00000679454|ADCY3', 'ADCY3|p.R614Q|1|0.27|ENSG00000138031|chr2:24834611-24834611|C/T|missense_variant'] 119016 12551 VEFTRSLFVN True NCI_RA007_Epitope_Rep5 1210.6346227381798 1210.63352993586 54.931 2 0.2612353065162158 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 137194 6594 YLDYHM[Oxidation]EKY True H1975_Epitope_Rep3 1276.5434251557201 1276.5417749037902 30.317 3 0.26117855287956226 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 138247 12308 YQTQLIQRV True PC9_epitope_Rep2 1147.6349570913499 1147.63386993586 52.656 2 0.261138419815104 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 22220 9954 ETDKNGFLQY True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 43.279 2 0.2611329425831532 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 29222 16727 FVDDYTVRV True PC9_epitope_Rep3 1112.55022440788 1112.54912993586 69.479 2 0.26113001787636125 0.00036105427849320016 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 94387 8307 RYFDPANGKF True NCI_RA007_Epitope_Rep3 1213.5880068989297 1213.5869099358601 39.794 2 0.2611135799594777 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 36009 12964 GVDDAANFRTV True PC9_epitope_Rep3 1163.5571006934701 1163.5560099358602 54.891 2 0.26110452514246923 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 74900 9523 NLQYYDISAK True NCI_RA007_Epitope_Rep2 1213.5979028762902 1213.5968099358602 41.656 2 0.2610474252151006 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 109666 4815 THEAQIQEMR True PC9_epitope_Rep1 1241.58226989549 1241.5806149037899 23.391 3 0.2610145557960054 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 49466 19833 KIVPVEITI True PC9_epitope_Rep5 1010.6375828603 1010.63648993586 81.335 2 0.26101349681696207 0.00036105427849320016 0.9438714419765777 ['ENST00000371870.3_1_1:47799617-47838812:+|nuORF', 'nc|ENSG00000162368|P30085|CMPK1', 'ENSG00000162368|ENST00000371873|CMPK1'] 5373 6945 ALTSELANAR True H1975_Epitope_Rep3 1044.55637241748 1044.55526993586 31.675 2 0.2609900912894064 0.00036105427849320016 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 4455 10028 AKDIGFIKLD True NCI_RA007_Epitope_Rep3 1118.63356010902 1118.6324699358602 46.537 2 0.26093125984593774 0.00036105427849320016 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000401543.2_1_9:90140306-90140387:+|nuORF', 'ENST00000496507.1_1_4:25680486-25680639:+|nuORF', 'ENST00000557367.2_1_14:50050387-50052826:-|nuORF'] 128414 10515 VSEDSSVTQIY True H1975_Epitope_Rep2 1226.56666231766 1226.5655699358601 45.466 2 0.26091146019211303 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 116552 12242 TYFEKNFNL True NCI_RA007_Epitope_Rep5 1174.56587447202 1174.56476993586 53.739 2 0.26089494752797676 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 57915 10516 LEQLFQDEVAK True H1975_Epitope_Rep3 1318.67688147298 1318.6757899358602 45.513 2 0.26088939231242064 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 103004 14873 SQITAIEAQHL True PC9_epitope_Rep5 1209.63535101417 1209.63424993586 62.211 2 0.26088770011280993 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 136770 10483 YIQENLELVEK True H1975_Epitope_Rep1 1376.71874628496 1376.7176499358602 45.278 2 0.2608504581466609 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 64971 6667 LSDDHGASWRY True H1975_Epitope_Rep1 1305.5738133867699 1305.57217490379 30.697 3 0.2608098522504456 0.00036105427849320016 0.9438714419765777 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 114902 10340 TTESFEDGLKY True H1975_Epitope_Rep2 1288.5823123818 1288.5812099358602 44.781 2 0.26080355845458186 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1'] 70953 11340 M[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1214.5641606002998 1214.56306993586 48.596 2 0.2607979586852372 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 7973 7766 ATDLTREVY True H1975_Epitope_Rep2 1066.5294889632999 1066.52838993586 34.819 2 0.26079086343187585 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 71705 4870 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 23.819 2 0.26078355322930324 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 139292 12887 YTDKIMTYL True H1975_Epitope_Rep2 1146.5630975907 1146.56200993586 54.683 2 0.26078276199726624 0.00036105427849320016 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 118295 6305 VDATAETDLAK True NCI_RA007_Epitope_Rep2 1132.5611830144 1132.56008993586 29.13 2 0.26076319880981014 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 8198 12995 ATGSWDSFLK True NCI_RA007_Epitope_Rep2 1110.53457434374 1110.53346993586 55.173 2 0.2607606653522306 0.00036105427849320016 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 131927 11754 VYEYVVERF True NCI_RA007_Epitope_Rep3 1202.5971746002995 1202.5960699358602 53.344 2 0.2607509768371227 0.00036105427849320016 0.9438714419765777 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 54092 20201 KYMDINFDF True PC9_epitope_Rep4 1191.52704643515 1191.5259499358601 85.841 2 0.26074684583626045 0.00036105427849320016 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 114805 15581 TTDDWKDFLY True H1975_Epitope_Rep3 1302.57683307854 1302.5757299358602 65.349 2 0.2607257806430709 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 61198 10596 LLDPAQRTLY True H1975_Epitope_Rep2 1188.65027280232 1188.64916993586 45.78 2 0.26070460767916015 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130544|Q8N988|ZNF557', 'ENSG00000130544|ENST00000252840|ZNF557', 'ENSG00000167785|ENST00000601372|ZNF558', 'ENST00000597304.5_1_19:8921959-8932201:-|nuORF'] 27343 6578 FM[Oxidation]ETATESLAK True H1975_Epitope_Rep3 1242.58020458726 1242.57910993586 30.258 2 0.2606841986576417 0.00036105427849320016 0.9438714419765777 ['CON__Q58D62'] 14199 16140 DSTLIM[Oxidation]QLLR True H1975_Epitope_Rep3 1204.6485589305998 1204.64746993586 67.539 2 0.26063338638050476 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 24073 15636 EYQKVWNLF True NCI_RA007_Epitope_Rep5 1225.6131590176099 1225.61206993586 66.851 2 0.26062996968188906 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 26717 11697 FLDGIYVSEK True H1975_Epitope_Rep3 1169.59684024713 1169.59574993586 50.132 2 0.26061708513194887 0.00036105427849320016 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 46075 14818 ISYGPDWKDFY True H1975_Epitope_Rep3 1389.6241176241301 1389.6230299358601 62.378 2 0.2606140526846142 0.00036105427849320016 0.9438714419765777 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000566672.5_1_15:72638574-72647950:-|nuORF'] 9765 16957 AYLEAIHNF True PC9_epitope_Rep4 1076.52909504048 1076.52857496793 73.217 1 0.2606124346164646 0.00036105427849320016 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 108400 9546 TEEAFNTQVTA True H1975_Epitope_Rep2 1209.55134660669 1209.5502499358602 41.69 2 0.26061066431135854 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 140701 17074 YYQEYPM[Oxidation]SI True PC9_epitope_Rep5 1208.5059770178398 1208.5048699358601 70.694 2 0.26060270597923463 0.00036105427849320016 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 86478 19674 QQVQRLPFL True PC9_epitope_Rep3 1127.64512785223 1127.64402993586 80.91 2 0.26059008903415354 0.00036105427849320016 0.9438714419765777 ['ENSG00000132963|ENST00000380842|POMP'] 48886 3715 KETAEAYLGKK True NCI_RA007_Epitope_Rep2 1236.6714021697196 1236.66976490379 19.096 3 0.26057700552201213 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 10060 13734 AYVHMVTHF True PC9_epitope_Rep1 1103.52223583823 1103.52112993586 57.674 2 0.26057165853136677 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 75517 3863 NQKDPGVLDR True NCI_RA007_Epitope_Rep2 1140.58873517492 1140.5870849037901 19.661 3 0.260565048640289 0.00036105427849320016 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 27701 15952 FQDKDQVFI True PC9_epitope_Rep5 1138.56587447202 1138.56476993586 66.348 2 0.2605544882437388 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 22232 13321 ETDLLDIRSEY True H1975_Epitope_Rep3 1352.64597526752 1352.64486993586 56.499 2 0.26053905060373994 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 136553 13275 YHSEVPVSL True PC9_epitope_Rep4 1029.51311062317 1029.51200993586 58.959 2 0.2605078983070111 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 89368 7411 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 33.484 2 0.2604845340918831 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 30084 20991 FYNLLTRTF True PC9_epitope_Rep5 1173.61824439805 1173.6171499358602 85.804 2 0.2604294310773506 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 138850 4927 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 24.034 2 0.26040875336454455 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 22362 11681 ETEQTKFWDY True H1975_Epitope_Rep2 1345.5826467349698 1345.58154993586 50.003 2 0.2604008862563449 0.00036105427849320016 0.9438714419765777 ['ENSG00000196968|ENST00000372841|FUT11'] 61133 7479 LLDEHHISY True H1975_Epitope_Rep2 1125.54547338061 1125.54436993586 33.715 2 0.2603836325915365 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 132450 16178 VYNSEYYHF True PC9_epitope_Rep1 1220.5138388991602 1220.51274993586 67.043 2 0.26036791886946775 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 90919 13805 RLEIEPEWAY True H1975_Epitope_Rep1 1304.64010204144 1304.63900993586 58.247 2 0.2603471381873094 0.00036105427849320016 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 138408 11797 YRDPTTVTTL True PC9_epitope_Rep4 1165.59790287629 1165.5968099358602 53.146 2 0.26032916800507566 0.00036105427849320016 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 68777 9542 LVDPASHTLY True H1975_Epitope_Rep2 1114.56587447202 1114.56476993586 41.675 2 0.2602941653055969 0.00036105427849320016 0.9438714419765777 ['SEMA4F|p.P563Lfs*9|1|0.13|ENSG00000135622|chr2:74679319-74679319|C/-|frameshift_variant', 'nc|ENSG00000135622|O95754-2|SEMA4F', 'ENSG00000135622|ENST00000357877|SEMA4F'] 86791 13742 QRNEVVVEL True PC9_epitope_Rep5 1084.58767254576 1084.58656993586 57.88 2 0.26027771960345636 0.00036105427849320016 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 106915 6498 SYISRTNQL True NCI_RA007_Epitope_Rep3 1080.5563724174801 1080.55526993586 32.596 2 0.26025752979066197 0.00036105427849320016 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 14113 9515 DSDYHDENMYY True H1975_Epitope_Rep3 1450.49832505766 1450.49722993586 41.605 2 0.26024922310982873 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 29699 12200 FVNVVPTFGK True NCI_RA007_Epitope_Rep5 1106.6124307416198 1106.61132993586 53.58 2 0.26024568685418814 0.00036105427849320016 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 74197 19694 NIANHFFTV True PC9_epitope_Rep1 1061.52942939365 1061.52832993586 80.578 2 0.26024467766159953 0.00036105427849320016 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 48448 7621 KEEELQAALAR True PC9_epitope_Rep4 1256.67246479888 1256.6708249037902 36.695 3 0.2602399992688957 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH11|p.K1088del|1|0.12|ENSG00000133392|chr16:15737478-15737480|CTT/-|inframe_deletion', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 10015 15215 AYTLLLHTW True NCI_RA007_Epitope_Rep5 1116.59678067748 1116.59568993586 65.209 2 0.26023814755670344 0.00036105427849320016 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 104341 8822 SSEVIKDANLY True H1975_Epitope_Rep1 1237.6190322436898 1237.61792993586 38.855 2 0.2602315328174681 0.00036105427849320016 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 24179 18240 EYTPRSWNF True PC9_epitope_Rep1 1198.54072235334 1198.5396299358601 74.952 2 0.26020938964819157 0.00036105427849320016 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 41000 21382 HYFDPQYFEF True PC9_epitope_Rep2 1391.58225281215 1391.5811499358601 87.716 2 0.26012700543163114 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I'] 991 7433 AEAEAWYQTK True H1975_Epitope_Rep3 1195.5509526838698 1195.54984993586 33.569 2 0.2601213119139 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF'] 56693 7756 LEAEIATYR True H1975_Epitope_Rep1 1064.55022440788 1064.54912993586 34.791 2 0.2601183128340883 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 22363 11568 ETEQTKFWDY True H1975_Epitope_Rep3 1345.5826467349698 1345.58154993586 49.624 2 0.2601141599566464 0.00036105427849320016 0.9438714419765777 ['ENSG00000196968|ENST00000372841|FUT11'] 87364 12660 QTDIQGALSAY True H1975_Epitope_Rep1 1165.5615173675699 1165.5604299358602 53.75 2 0.2601002763866963 0.00036105427849320016 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 117037 8002 TYQEVAQKF True NCI_RA007_Epitope_Rep4 1112.5502244078798 1112.54912993586 37.547 2 0.2600994701108239 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 97071 11022 SEYLRYEDTL True H1975_Epitope_Rep2 1287.59829679911 1287.5971899358601 47.426 2 0.260081191976658 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 74752 15924 NLLPKLHIV True PC9_epitope_Rep6 1045.66480066765 1045.6637099358602 73.539 2 0.26006653026909127 0.00036105427849320016 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 87406 12992 QTDQMVFNAY True H1975_Epitope_Rep2 1215.52302368387 1215.52192993586 55.091 2 0.26006596701577 0.00036105427849320016 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 64310 19553 LQMEPAAFQAL True PC9_epitope_Rep6 1217.61144476545 1217.61034993586 87.873 2 0.2600505331993575 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 69188 12183 LVMEEAPESYK True PC9_epitope_Rep1 1294.6115043350999 1294.6104099358602 51.72 2 0.2600083373625502 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 89009 10977 REEDFYYTEV True H1975_Epitope_Rep3 1349.5775613545297 1349.5764699358601 47.311 2 0.2600016577310589 0.00036105427849320016 0.9438714419765777 ['ENSG00000186918|ENST00000344423|ZNF395'] 135093 9423 YALYDATYETK True H1975_Epitope_Rep1 1336.61869789052 1336.6176099358602 41.158 2 0.2599943655886279 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 31947 11995 GESDDSILRLA True H1975_Epitope_Rep3 1174.58298108814 1174.58188993586 51.298 2 0.25996805399299117 0.00036105427849320016 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 61372 14586 LLEKEILFY True H1975_Epitope_Rep3 1166.6587122276999 1166.6576099358601 61.474 2 0.25993956365087795 0.00036105427849320016 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5'] 101810 10979 SPIENIQRVA True PC9_epitope_Rep6 1125.6142216467701 1125.6131299358601 53.123 2 0.25987098727102126 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 2097 11466 AELNEFLTR True NCI_RA007_Epitope_Rep1 1091.56112344475 1091.56002993586 48.566 2 0.25985513012160044 0.00036105427849320016 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 135614 6085 YEENSHLTSV True H1975_Epitope_Rep2 1177.52513185885 1177.5240299358602 28.381 2 0.2598167281675916 0.00036105427849320016 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2'] 56695 7931 LEAEIATYR True H1975_Epitope_Rep3 1064.55022440788 1064.54912993586 35.476 2 0.2598132770450267 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 42419 4706 IEQAYDNPHEA True H1975_Epitope_Rep3 1285.55749461629 1285.5563899358601 23.227 2 0.2598045812487595 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 45493 9270 ISEQTGKELLY True H1975_Epitope_Rep1 1279.66598243611 1279.6648899358602 40.568 2 0.2597885126404528 0.00036105427849320016 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 24039 15168 EYQDLLNVK True PC9_epitope_Rep2 1120.5764391557198 1120.57534993586 63.601 2 0.25978656483575185 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 140684 10876 YYPTEDVPR True PC9_epitope_Rep3 1138.5294889632999 1138.52838993586 46.814 2 0.2597745945888674 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 69481 7802 LVSESSDVLPK True NCI_RA007_Epitope_Rep4 1172.6288686514001 1172.6277699358602 36.695 2 0.25974830919247904 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 139340 4020 YTDSSYEEKKY True H1975_Epitope_Rep2 1411.61434078607 1411.61269490379 20.535 3 0.2597460640958102 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 140475 22089 YYIEGIENSVF True PC9_epitope_Rep2 1332.62378327096 1332.62268993586 90.438 2 0.25973581510973 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 71727 4442 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1273.50672275761 1273.50562993586 22.197 2 0.2597289396418134 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 117911 14746 VAQLEQVYIR True PC9_epitope_Rep5 1217.6768219033297 1217.67572993586 61.719 2 0.2596635398530135 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 83202 19004 PYYSKFILI True PC9_epitope_Rep6 1142.6375828603 1142.63648993586 85.742 2 0.25961759439566967 0.00036105427849320016 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5'] 55527 14112 LAWLDEHTL True NCI_RA007_Epitope_Rep5 1096.55530978832 1096.5542099358602 60.972 2 0.2596163920574305 0.00036105427849320016 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF'] 9589 20274 AYDTVRWEF True PC9_epitope_Rep3 1185.5454733806098 1185.54436993586 83.24 2 0.2596037475014356 0.00036105427849320016 0.9438714419765777 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 135699 11201 YEILTPNSIPK True H1975_Epitope_Rep3 1273.69180326113 1273.69070993586 48.182 2 0.25958924634377567 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 3130 6945 AGDLLEDSPK True H1975_Epitope_Rep3 1043.51350454599 1043.5124099358602 31.675 2 0.25956487253454535 0.00036105427849320016 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000477306.1_1_1:156713442-156714029:-|nuORF'] 104282 8660 SSEEIESAFR True NCI_RA007_Epitope_Rep2 1153.5251318588498 1153.5240299358602 38.332 2 0.2595635933274041 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 4686 9703 ALDGRETDFY True H1975_Epitope_Rep2 1185.5302172392899 1185.52912993586 42.306 2 0.25953277146446546 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 37451 21442 GWYDEEHPLVF True PC9_epitope_Rep3 1390.6193665968601 1390.61826993586 87.768 2 0.2595194872763613 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 60174 12149 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 54.549 2 0.25951426113350046 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 106140 17471 SVPDPELIKTV True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 71.998 2 0.25949373431423517 0.00036105427849320016 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 138837 12196 YSDLHAFYY True H1975_Epitope_Rep1 1177.5080252427301 1177.5069299358602 51.931 2 0.2594817458255915 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185090|Q5VSG8-3|MANEAL', 'ENSG00000185090|ENST00000373045|MANEAL'] 136871 19810 YIYDKDMEII True PC9_epitope_Rep2 1301.6213407428097 1301.62024993586 81.588 2 0.25945777021213795 0.00036105427849320016 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 132339 13978 VYLPTHTSL True PC9_epitope_Rep2 1029.54949613189 1029.54838993586 59.039 2 0.2594419475551804 0.00036105427849320016 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 69841 13626 LYADVGGKQF True PC9_epitope_Rep5 1096.55530978832 1096.5542099358602 57.435 2 0.25942953419115905 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 9268 6456 AVQTAAKELLK True NCI_RA007_Epitope_Rep4 1170.6972229947398 1170.69556490379 31.432 3 0.2594053156491417 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000123992|Q9ULA0-2|DNPEP', 'ENSG00000123992|ENST00000273075|DNPEP', 'ENST00000460963.5_1_2:220250088-220252486:-|nuORF', 'ENST00000430206.5_1_2:220251659-220252065:-|nuORF', 'ENST00000523527.5_1_2:220250965-220252516:-|nuORF'] 64980 11796 LSDDRSNILIY True H1975_Epitope_Rep1 1307.67213044571 1307.6710299358601 50.365 2 0.2593944385867402 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142892|Q92643-2|PIGK', 'ENSG00000142892|ENST00000370812|PIGK', 'PIGK-TGFBR3|1|fusion', 'PIGK-TGFBR3|2|fusion'] 119307 7550 VELQELNDR True H1975_Epitope_Rep3 1114.5618517207397 1114.56074993586 34.022 2 0.25937799769884107 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 115813 10368 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep5 1134.59546072858 1134.5943699358602 44.864 2 0.2593734553146315 0.00036105427849320016 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 23328 8788 EVTEFEDIK True H1975_Epitope_Rep3 1108.5288202569598 1108.5277299358602 38.808 2 0.25937102308096815 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 21881 10960 ESENVVCHFY True H1975_Epitope_Rep3 1225.50737361973 1225.50626993586 47.246 2 0.2593502255300554 0.00036105427849320016 0.9438714419765777 ['ENST00000463385.5_1_2:99938416-99949470:-|nuORF', 'nc|ENSG00000115514|O14530-2|TXNDC9', 'ENSG00000115514|ENST00000264255|TXNDC9'] 33984 16779 GNFNYVEFTR True PC9_epitope_Rep2 1245.5778361380499 1245.5767299358602 69.787 2 0.2593333058430755 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 64975 6799 LSDDHGASWRY True H1975_Epitope_Rep3 1305.5738133867699 1305.57217490379 31.105 3 0.2593238349119756 0.00036105427849320016 0.9438714419765777 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 140584 16595 YYLTDVDRI True PC9_epitope_Rep6 1156.5764391557198 1156.57534993586 76.287 2 0.25932186985719197 0.00036105427849320016 0.9438714419765777 ['ENSG00000088256|ENST00000078429|GNA11'] 56694 7850 LEAEIATYR True H1975_Epitope_Rep1 1064.55022440788 1064.54912993586 35.147 2 0.25931702275043056 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 45568 13356 ISGLIYEETR True PC9_epitope_Rep2 1179.6135529404298 1179.61244993586 56.648 2 0.25931054198700093 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 138848 4734 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 23.301 2 0.2593020940028031 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 7488 12403 ASEAEMRLFY True H1975_Epitope_Rep1 1215.55940919259 1215.55830993586 52.742 2 0.25928663561612547 0.00036105427849320016 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 67195 11618 LTDIFQHDTY True H1975_Epitope_Rep3 1251.57716743171 1251.57606993586 49.82 2 0.25925648495237164 0.00036105427849320016 0.9438714419765777 ['ENSG00000164366|ENST00000296824|CCDC127'] 17512 9567 EHINEGETAM[Oxidation]L True PC9_epitope_Rep5 1258.5499670881397 1258.54886993586 41.76 2 0.25923736602826136 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 41063 13716 HYKPTPLYF True PC9_epitope_Rep2 1164.59678067748 1164.59568993586 58.049 2 0.25923156158332256 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 52724 15501 KQLDDLKVEL True PC9_epitope_Rep5 1199.6761531969898 1199.6745149037902 64.634 3 0.25920112733305223 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 133030 16474 VYVQNVVKL True PC9_epitope_Rep1 1060.6280808057597 1060.6269899358601 68.193 2 0.25917892840262813 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 101706 6038 SPGLQKEAV True PC9_epitope_Rep1 927.5025459394699 927.50144993586 28.038 2 0.25917193016638174 0.00036105427849320016 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 138242 22119 YQTPRLWLF True PC9_epitope_Rep1 1222.6498788795 1222.6487899358601 89.893 2 0.2591626943540866 0.00036105427849320016 0.9438714419765777 ['ENST00000467275.1_1_3:112256557-112257010:-|nuORF', 'nc|ENSG00000144848|Q9NT62-2|ATG3', 'ENSG00000144848|ENST00000283290|ATG3', 'ENST00000495756.5_1_3:112255248-112280627:-|nuORF'] 73910 16980 NHIEPLKIQL True PC9_epitope_Rep1 1203.6975573479099 1203.69592490379 70.136 3 0.2591288673989435 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 24076 21158 EYQKVWNLF True PC9_epitope_Rep3 1225.6131590176099 1225.61206993586 86.67 2 0.25912481212276706 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 94692 8248 RYLENGKETL True PC9_epitope_Rep1 1221.6353510141698 1221.6337049037902 36.56 3 0.25910756470724033 0.00036105427849320016 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 85380 8265 QLEDGRTLSDY True H1975_Epitope_Rep2 1295.59935942827 1295.5982699358601 36.743 2 0.25910673311501403 0.00036105427849320016 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 136528 14181 YHQPAPIAQL True PC9_epitope_Rep1 1136.5978433066398 1136.59674993586 59.369 2 0.2590866026811583 0.00036105427849320016 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-4|KHDC4', 'ENST00000466713.1_1_1:155896424-155904164:-|nuORF', 'KIAA0907-UBQLN4|1|fusion', 'nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 23902 20901 EYMLEKSFYQF True PC9_epitope_Rep2 1483.6693535643901 1483.66824993586 85.841 2 0.2590511828180422 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 135195 16950 YAVEGRDLTL True PC9_epitope_Rep3 1135.5873381925899 1135.58624993586 70.356 2 0.25903444960819155 0.00036105427849320016 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 46833 14165 IVENIQVFDFK True H1975_Epitope_Rep3 1350.7183523621395 1350.71724993586 59.818 2 0.2589844209114751 0.00036105427849320016 0.9438714419765777 ['ENSG00000198074|ENST00000359579|AKR1B10', 'nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000227471|ENST00000457545|AKR1B15'] 129160 5819 VTDDSPKYNY True H1975_Epitope_Rep3 1200.5298828861198 1200.52878993586 27.405 2 0.25898352868529523 0.00036105427849320016 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 120366 21425 VFRLQFDEF True PC9_epitope_Rep1 1199.5975089534697 1199.59640993586 87.249 2 0.258958560218646 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11', 'nc|ENSG00000166167|Q9Y297-2|BTRC', 'ENSG00000166167|ENST00000370187|BTRC'] 64981 11898 LSDDRSNILIY True H1975_Epitope_Rep2 1307.67213044571 1307.6710299358601 50.845 2 0.25893664557418644 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142892|Q92643-2|PIGK', 'ENSG00000142892|ENST00000370812|PIGK', 'PIGK-TGFBR3|1|fusion', 'PIGK-TGFBR3|2|fusion'] 109200 16775 TFSWASVTSK True PC9_epitope_Rep1 1112.55022440788 1112.54912993586 69.349 2 0.2589199230065382 0.00036105427849320016 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 139181 7406 YSTDVSVDEVK True H1975_Epitope_Rep1 1240.5823123818002 1240.5812099358602 33.49 2 0.2589162674104562 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148672|P00367-3|GLUD1', 'GLUD2|p.P408Qfs*23|1|0.53|ENSG00000182890|chrX:121048903-121048903|G/-|frameshift_variant', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1', 'GLUD1|p.G331Vfs*49|1|0.33|ENSG00000148672|chr10:87060982-87060982|C/-|frameshift_variant'] 116537 14244 TYESIFSHF True NCI_RA007_Epitope_Rep3 1129.50802524273 1129.5069299358602 63.341 2 0.25890733444400227 0.00036105427849320016 0.9438714419765777 ['ENST00000530761.5_1_11:117857521-117870353:+|nuORF', 'ENSG00000110324|ENST00000227752|IL10RA'] 2828 12018 AEVIVDWRP True NCI_RA007_Epitope_Rep3 1083.57129420563 1083.57018993586 54.399 2 0.2588978833642739 0.00036105427849320016 0.9438714419765777 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15', 'ENST00000546932.5_1_12:72265915-72278641:+|nuORF'] 107404 12877 SYTRLFSNF True NCI_RA007_Epitope_Rep3 1133.5505587610498 1133.54946993586 57.908 2 0.2588847484352295 0.00036105427849320016 0.9438714419765777 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 139182 7524 YSTDVSVDEVK True H1975_Epitope_Rep3 1240.5823123818002 1240.5812099358602 33.921 2 0.25887790186836646 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148672|P00367-3|GLUD1', 'GLUD2|p.P408Qfs*23|1|0.53|ENSG00000182890|chrX:121048903-121048903|G/-|frameshift_variant', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1', 'GLUD1|p.G331Vfs*49|1|0.33|ENSG00000148672|chr10:87060982-87060982|C/-|frameshift_variant'] 92292 10783 RQLETLGQEKL True PC9_epitope_Rep5 1313.7303140281695 1313.72866490379 46.468 3 0.25886396675562656 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 77470 21063 NYPETLGRLLI True PC9_epitope_Rep3 1287.7186867153098 1287.7175899358601 86.3 2 0.25886370291067634 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 67129 15263 LTDDHVQFLIY True H1975_Epitope_Rep2 1362.6819668534201 1362.68086993586 63.868 2 0.25885587365222756 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112062|Q16539-5|MAPK14', 'nc|ENSG00000112062|Q16539-3|MAPK14', 'nc|ENSG00000112062|Q16539-4|MAPK14', 'nc|ENSG00000112062|Q16539-2|MAPK14', 'ENSG00000112062|ENST00000229794|MAPK14'] 17716 16194 EHSLVIDTL True PC9_epitope_Rep4 1025.53932537101 1025.53822993586 70.232 2 0.25882755588142936 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 107132 17426 SYMLVNENRF True PC9_epitope_Rep5 1271.5968573304701 1271.59576993586 72.029 2 0.25879434703520043 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 132770 18993 VYSPLGSAYKL True PC9_epitope_Rep5 1196.6441247927198 1196.64302993586 78.083 2 0.2587906154959975 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'ENST00000514806.5_1_5:54965038-54993786:-|nuORF'] 13708 20943 DQIAKYWEL True PC9_epitope_Rep1 1164.5815245361598 1164.5804299358601 85.378 2 0.2587634042126829 0.00036105427849320016 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 41419 10255 IASPEGQDYLK True PC9_epitope_Rep4 1219.6084675599898 1219.60736993586 47.127 2 0.2587614271493022 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 90062 13149 RGLDDIKDLKV True PC9_epitope_Rep4 1270.7245003717399 1270.72285490379 58.474 3 0.25875489754868414 0.00036105427849320016 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF'] 15196 6339 EAFNM[Oxidation]IDQNR True H1975_Epitope_Rep3 1252.5506357944798 1252.5495299358602 29.373 2 0.2587077142764047 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 65387 8797 LSERADWQY True H1975_Epitope_Rep3 1166.5356369729 1166.53452993586 38.844 2 0.25867637789342873 0.00036105427849320016 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 113659 14967 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61225490379 62.828 3 0.2586746468634209 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 135255 19362 YAYDGKDYLAL True PC9_epitope_Rep3 1290.6132185872598 1290.6121299358601 79.699 2 0.25865588721855265 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 54444 15967 KYTKIFNDF True PC9_epitope_Rep5 1174.60225998074 1174.60116993586 66.406 2 0.25865407331934376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 53792 13887 KYFLKPEVL True PC9_epitope_Rep4 1135.6641319613097 1135.66302993586 61.318 2 0.25864235894295096 0.00036105427849320016 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 72843 16058 NALRELETV True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 66.581 2 0.2586400868888232 0.00036105427849320016 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000489129.5_1_15:63032816-63046163:+|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 9847 17349 AYLPEWKENI True PC9_epitope_Rep6 1261.6342883850098 1261.6331899358602 79.347 2 0.2586168131294102 0.00036105427849320016 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 67116 11179 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.5811499358601 47.968 2 0.2586132737281604 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 37452 20485 GWYDEEHPLVF True PC9_epitope_Rep4 1390.6193665968601 1390.61826993586 86.944 2 0.258605817218444 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 49350 20525 KIFDEILVNA True PC9_epitope_Rep5 1160.64412479272 1160.64302993586 83.991 2 0.25859088705631716 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 89358 7397 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 33.395 2 0.25859056025326627 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 38770 14795 HHYEGAVVIL True PC9_epitope_Rep5 1136.5978433066398 1136.5961849037901 61.909 3 0.258580724753091 0.00036105427849320016 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 64260 19296 LQLDPAQIYRV True PC9_epitope_Rep4 1314.7295857521801 1314.7284899358601 82.327 2 0.25857453768648875 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000179750|ENST00000333467|APOBEC3B'] 82149 4867 PTDSLNNDNKY True H1975_Epitope_Rep2 1279.5680592999902 1279.56696993586 23.808 2 0.25856238427154365 0.00036105427849320016 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 47231 17456 IYDPNLAFLRF True NCI_RA007_Epitope_Rep4 1367.7237720957498 1367.72266993586 75.579 2 0.25855532158836436 0.00036105427849320016 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 37606 8281 GYSFTTTAER True PC9_epitope_Rep6 1131.51965255559 1131.5185499358602 41.463 2 0.2585264107776204 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 62721 9142 LLYESPERY True H1975_Epitope_Rep2 1168.57643915572 1168.57534993586 40.116 2 0.25851604356821745 0.00036105427849320016 0.9438714419765777 ['ENSG00000168394|ENST00000354258|TAP1', 'nc|ENSG00000168394|Q03518-2|TAP1'] 132125 7434 VYISEHEHF True NCI_RA007_Epitope_Rep1 1159.5298233164701 1159.5287299358602 32.914 2 0.258506691754587 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 104269 11255 SSDTADFRDLY True H1975_Epitope_Rep3 1288.55716026312 1288.55606993586 48.396 2 0.25850133260523545 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 42616 7101 IETIEVM[Oxidation]EDR True H1975_Epitope_Rep1 1249.58601824369 1249.5849299358601 32.339 2 0.2584990437200309 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 68769 10966 LVDNSIRELQY True H1975_Epitope_Rep2 1348.69867954672 1348.6975899358602 47.21 2 0.2584965706802264 0.00036105427849320016 0.9438714419765777 ['ENST00000517778.5_1_19:48737137-48744277:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-6|CARD8', 'ENST00000518596.5_1_19:48737658-48744277:-|nuORF', 'ENST00000522051.5_1_19:48737658-48744277:-|nuORF', 'CARD8|p.D114Afs*27|1|0.28|ENSG00000105483|chr19:48234412-48234412|T/-|frameshift_variant', 'nc|ENSG00000105483|Q9Y2G2-3|CARD8', 'ENSG00000105483|ENST00000651546|CARD8'] 21392 11251 ERMPEQIRL True PC9_epitope_Rep2 1170.61792712822 1170.61627490379 48.602 3 0.2584960196440683 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 52232 3770 KNGELENIKPK True NCI_RA007_Epitope_Rep2 1268.7088503076 1268.7072149037901 19.304 3 0.2584854719979754 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168092|P68402-3|PAFAH1B2', 'nc|ENSG00000168092|P68402-2|PAFAH1B2', 'ENST00000533206.1_1_11:117023163-117034692:+|nuORF', 'nc|ENSG00000168092|P68402-4|PAFAH1B2', 'ENSG00000168092|ENST00000527958|PAFAH1B2'] 42052 10266 IEEDIRDLAA True H1975_Epitope_Rep3 1143.57716743171 1143.57606993586 44.539 2 0.25847656390593393 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 47393 7836 IYIKHPHLF True NCI_RA007_Epitope_Rep3 1166.66004964038 1166.6584049037901 37.946 3 0.2584720927231306 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 76048 8570 NRLENDGATAL True PC9_epitope_Rep2 1172.5785644140399 1172.57746993586 38.326 2 0.25844360866051813 0.00036105427849320016 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 77319 15070 NYKKFYEQF True PC9_epitope_Rep3 1265.6080736371698 1265.6069699358602 63.101 2 0.2584304621895945 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 65281 9873 LSEINKPNFY True H1975_Epitope_Rep2 1223.61863832087 1223.61754993586 42.964 2 0.2584283000801006 0.00036105427849320016 0.9438714419765777 ['ENSG00000067334|ENST00000436063|DNTTIP2', 'DNTTIP2|p.N616Tfs*33|1|0.3|ENSG00000067334|chr1:93873174-93873174|T/-|frameshift_variant'] 77261 21967 NYIPRFWTF True PC9_epitope_Rep3 1242.6185787512197 1242.61748993586 89.796 2 0.2584119133908137 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 100325 9700 SLMHSFILK True NCI_RA007_Epitope_Rep3 1074.5895871220598 1074.58848993586 45.229 2 0.25839130844059627 0.00036105427849320016 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 76986 5073 NVSDAVAQSTR True NCI_RA007_Epitope_Rep2 1146.5629143499002 1146.56180993586 24.358 2 0.25838191451698445 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 94406 11543 RYFDPANGKF True PC9_epitope_Rep4 1213.5880068989297 1213.58635490379 52.162 3 0.25836717352579047 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 104284 12220 SSEELLSLKY True H1975_Epitope_Rep2 1167.60231955039 1167.6012299358601 52.087 2 0.25835846899844717 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 24221 17183 EYVNDFDLLKF True NCI_RA007_Epitope_Rep3 1401.6816325002499 1401.68052993586 75.483 2 0.25834311815751954 0.00036105427849320016 0.9438714419765777 ['ENSG00000204103|ENST00000373313|MAFB'] 75978 14306 NRHYYSITI True PC9_epitope_Rep3 1165.58800689893 1165.58635490379 60.114 3 0.25833525523505857 0.00036105427849320016 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 71732 5945 MMDPNSTQRY True H1975_Epitope_Rep2 1241.51689275761 1241.51578993586 27.849 2 0.25830971752678994 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 22884 5760 EVEVEVESM[Oxidation]DK True H1975_Epitope_Rep3 1308.5755131296398 1308.57440993586 27.182 2 0.2582901545543722 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 94787 19601 RYLPTGSFPFL True PC9_epitope_Rep6 1296.6866583110398 1296.68556993586 88.055 2 0.2582856345952359 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 67603 11760 LTEVDNYHFY True H1975_Epitope_Rep2 1299.5771674317102 1299.57606993586 50.31 2 0.25828197724675334 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 94142 21566 RWFQPAIPSW True PC9_epitope_Rep5 1286.6560268890996 1286.65492993586 87.993 2 0.25826964506449857 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 138838 12328 YSDLHAFYY True H1975_Epitope_Rep2 1177.5080252427301 1177.5069299358602 52.504 2 0.25826696051669534 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185090|Q5VSG8-3|MANEAL', 'ENSG00000185090|ENST00000373045|MANEAL'] 67193 11757 LTDIFQHDTY True H1975_Epitope_Rep2 1251.57716743171 1251.57606993586 50.299 2 0.258254490576171 0.00036105427849320016 0.9438714419765777 ['ENSG00000164366|ENST00000296824|CCDC127'] 108024 8180 TDEELSFRA True H1975_Epitope_Rep2 1066.49310345458 1066.49200993586 36.415 2 0.2582394464360165 0.00036105427849320016 0.9438714419765777 ['ENSG00000101213|ENST00000542869|PTK6', 'nc|ENSG00000101213|Q13882-2|PTK6'] 11472 7382 DGANIVIAAK True H1975_Epitope_Rep3 970.5447451046199 970.54364993586 33.374 2 0.2582263777836866 0.00036105427849320016 0.9438714419765777 ['HSDL2|p.K87Pfs*12|1|0.59|ENSG00000119471|chr9:112405699-112405702|AGAA/-|frameshift_variant', 'HSDL2|p.F238Lfs*12|1|0.48|ENSG00000119471|chr9:112438543-112438543|T/-|frameshift_variant', 'nc|ENSG00000119471|Q6YN16-2|HSDL2', 'ENSG00000119471|ENST00000398805|HSDL2'] 77316 12982 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.6069699358602 55.223 2 0.2582169853415135 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 35610 12103 GTLDYILQR True NCI_RA007_Epitope_Rep5 1077.5818588893299 1077.5807699358602 53.21 2 0.258210403119098 0.00036105427849320016 0.9438714419765777 ['ENSG00000140718|ENST00000471389|FTO'] 18467 13260 EKLEATINELV True H1975_Epitope_Rep1 1257.68163250025 1257.68052993586 56.103 2 0.2582045337495772 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 113678 13571 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61225490379 63.938 3 0.25820080815375884 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 94785 20731 RYLPTGSFPFL True PC9_epitope_Rep4 1296.6866583110398 1296.68556993586 87.906 2 0.25818220049332974 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 28362 11865 FSDIHDFEY True H1975_Epitope_Rep2 1171.48220441771 1171.48110993586 50.717 2 0.25818165205354315 0.00036105427849320016 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.E275*|1|0.26|ENSG00000196455|chr3:130735917-130735918|-/A|frameshift_variant'] 23901 21251 EYMLEKSFYQF True PC9_epitope_Rep1 1483.6693535643901 1483.66824993586 86.565 2 0.258158664551283 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 101350 7756 SM[Oxidation]DEKVELY True H1975_Epitope_Rep2 1128.5008916374 1128.49978993586 34.788 2 0.25815255344991944 0.00036105427849320016 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1'] 39886 21028 HQIPEFDNLYL True PC9_epitope_Rep3 1387.67721582615 1387.67610993586 86.162 2 0.2581392793030391 0.00036105427849320016 0.9438714419765777 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1'] 107169 21338 SYNNFFRMF True PC9_epitope_Rep2 1224.53861417836 1224.53750993586 87.543 2 0.25813784695874364 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 131922 14254 VYERELQTF True PC9_epitope_Rep5 1183.5873381925899 1183.58624993586 59.832 2 0.2581273315046857 0.00036105427849320016 0.9438714419765777 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 33218 15074 GLADNTVIAKV True PC9_epitope_Rep2 1099.62372370131 1099.62262993586 63.24 2 0.25812562602196293 0.00036105427849320016 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 10064 12400 AYVHMVTHF True PC9_epitope_Rep2 1103.52223583823 1103.52112993586 53.005 2 0.2581238961033611 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 89681 4567 REWEEAERQA True NCI_RA007_Epitope_Rep4 1302.59527710734 1302.59362490379 23.968 3 0.2581138939943054 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 21709 9411 ERYKEVAEL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 41.154 2 0.25810751857609 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 136663 8174 YIDQGRNPQLY True H1975_Epitope_Rep1 1365.66771377161 1365.6666099358602 36.381 2 0.2581021676984063 0.00036105427849320016 0.9438714419765777 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000503112.1_1_5:6372618-6374583:-|nuORF'] 69219 17614 LVNELTEFAK True PC9_epitope_Rep1 1162.6233893481399 1162.6222899358602 72.544 2 0.2580736212517094 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 45023 16316 IQLVEEELDR True PC9_epitope_Rep3 1242.6455813446998 1242.64448993586 67.895 2 0.2580705330009701 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 81765 4525 PSDPRYHEVHY True H1975_Epitope_Rep2 1398.63166261606 1398.63001490379 22.517 3 0.25804332970387445 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 32219 14906 GFGFVTFDDHD True NCI_RA007_Epitope_Rep5 1255.51456717515 1255.51346993586 64.004 2 0.2580419570569551 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 77378 11635 NYLSHHLTI True PC9_epitope_Rep4 1096.5665431783602 1096.5654499358602 52.51 2 0.2580334797029262 0.00036105427849320016 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 140609 12697 YYMKDLPTSF True NCI_RA007_Epitope_Rep3 1263.58456131127 1263.5834699358602 57.185 2 0.2579951910374381 0.00036105427849320016 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 8199 12351 ATGSWDSFLK True NCI_RA007_Epitope_Rep3 1110.53457434374 1110.53346993586 55.776 2 0.25799381926203274 0.00036105427849320016 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 14473 6996 DTSRPLGDSM[Oxidation]Y True H1975_Epitope_Rep3 1256.5343170239998 1256.5332099358602 31.872 2 0.2579822539925107 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 139663 11424 YTSYPMHDFY True H1975_Epitope_Rep1 1322.52777471114 1322.5266699358601 48.922 2 0.25797140622662473 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 42 13185 [Acetylation]-AAAAVVEFQR True H1975_Epitope_Rep1 1102.5771081783598 1102.5760099358602 55.812 2 0.2579603452937124 0.00036105427849320016 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 29041 12698 FTLSHITQL True H1975_Epitope_Rep3 1058.5760452329 1058.57494993586 54.054 2 0.2579495498729219 0.00036105427849320016 0.9438714419765777 ['ENSG00000148484|ENST00000345264|RSU1'] 23327 8623 EVTEFEDIK True H1975_Epitope_Rep1 1108.5288202569598 1108.5277299358602 38.095 2 0.25794927587958855 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 101103 20061 SLVDEFKEL True PC9_epitope_Rep4 1078.55464108198 1078.55354993586 85.301 2 0.2579442618210351 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 107005 18482 SYLKEFIHI True PC9_epitope_Rep4 1148.62299542532 1148.6213549037902 79.162 3 0.25793265770144175 0.00036105427849320016 0.9438714419765777 ['ENSG00000131966|ENST00000254286|ACTR10', 'ENST00000556312.5_1_14:58666935-58675849:+|nuORF', 'ENST00000556748.5_1_14:58666901-58681958:+|nuORF'] 135117 11954 YAPELLYYANK True H1975_Epitope_Rep1 1343.6761531969898 1343.6750499358602 50.985 2 0.2579029593934352 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 101783 10920 SPIENIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 47.326 2 0.2578957335801928 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 25251 12181 FEDENFILK True NCI_RA007_Epitope_Rep2 1153.5655401188499 1153.56444993586 51.979 2 0.2577923881082597 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 1494 5876 AEENIEVARAA True H1975_Epitope_Rep2 1171.5833154413099 1171.5822099358602 27.588 2 0.2577872251662638 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 27530 9950 FPGQLNADLR True H1975_Epitope_Rep3 1129.5880068989297 1129.5869099358601 43.306 2 0.2577396003507175 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'TUBB6|p.R241C|1|0.58|ENSG00000176014|chr18:12325510-12325510|C/T|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 87457 4780 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 23.475 2 0.25773688058068944 0.00036105427849320016 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 103410 4262 SQYEVM[Oxidation]AEQNR True H1975_Epitope_Rep3 1369.5932288824497 1369.5921299358602 21.511 2 0.25772118307863967 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 108378 10228 TEDQYSFIHEA True H1975_Epitope_Rep2 1338.5728103272597 1338.57170993586 44.347 2 0.2577153053369427 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 76797 16038 NVDSSYLESLY True H1975_Epitope_Rep2 1288.5823123818002 1288.5812099358602 66.889 2 0.25771156504400583 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1', 'nc|ENSG00000105939|Q7Z2W4-5|ZC3HAV1', 'nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1'] 36451 13618 GVIPYFPYSK True NCI_RA007_Epitope_Rep5 1169.6120963884498 1169.61098993586 59.067 2 0.257634951874498 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000161542|Q14558|PRPSAP1', 'ENSG00000161542|ENST00000446526|PRPSAP1', 'nc|ENSG00000141127|O60256-4|PRPSAP2', 'nc|ENSG00000141127|O60256-3|PRPSAP2', 'nc|ENSG00000141127|O60256-2|PRPSAP2', 'ENSG00000141127|ENST00000268835|PRPSAP2'] 124400 4969 VLEEGSVEAR True NCI_RA007_Epitope_Rep5 1087.5509526838698 1087.54984993586 25.815 2 0.2576343729091228 0.00036105427849320016 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 70081 20164 LYIGWDKHYGF True PC9_epitope_Rep3 1397.67682190333 1397.67572993586 82.815 2 0.25761420028403154 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 55493 16842 LAVNM[Oxidation]VPFPR True PC9_epitope_Rep1 1158.62195025994 1158.6208499358602 69.607 2 0.25759963120910545 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 15092 8739 EADEYLDKY True H1975_Epitope_Rep2 1144.49243474824 1144.4913299358602 38.576 2 0.2575945141395794 0.00036105427849320016 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 73015 14273 NDEELNKLLGK True PC9_epitope_Rep1 1271.6721304457099 1271.6710299358601 59.725 2 0.2575715447028561 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 72879 6315 NASTDYDLSDK True NCI_RA007_Epitope_Rep1 1227.52552578167 1227.52442993586 28.589 2 0.2575414426431358 0.00036105427849320016 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF', 'ENST00000474162.1_1_5:60686735-60687614:-|nuORF'] 54424 20542 KYSPFVVSF True PC9_epitope_Rep3 1072.5593325396 1072.55822993586 84.278 2 0.25753258066875084 0.00036105427849320016 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 41648 10517 IDIIPNPQER True NCI_RA007_Epitope_Rep2 1193.64043639461 1193.6393299358601 45.505 2 0.257496938511882 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 65384 8808 LSERADWQY True H1975_Epitope_Rep2 1166.5356369729 1166.53452993586 38.846 2 0.2574653197928491 0.00036105427849320016 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 139708 11913 YTVEDTHYV True PC9_epitope_Rep5 1125.49785448185 1125.4967499358602 50.821 2 0.25745995165524943 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 73913 15598 NHIEPLKIQL True PC9_epitope_Rep2 1203.6975573479099 1203.69646993586 65.275 2 0.25745566454476365 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 72697 13381 MYLKTVDKF True PC9_epitope_Rep5 1143.5998174525898 1143.59872993586 56.487 2 0.25742105909053864 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 119878 10910 VEVTEFEDIK True NCI_RA007_Epitope_Rep5 1207.59723416995 1207.59612993586 48.604 2 0.2573888225942564 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 56946 7017 LEDTLAETEAR True H1975_Epitope_Rep3 1246.60411045554 1246.6030099358602 31.955 2 0.2573678196209402 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 13801 7130 DQVANSAFVER True H1975_Epitope_Rep1 1234.59421447818 1234.5931099358602 32.45 2 0.2573305314781501 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 118525 11327 VDTFLEDVK True NCI_RA007_Epitope_Rep1 1064.5389910178399 1064.5378899358602 48.03 2 0.25729924125907355 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 62472 11557 LLSNDEVTIK True PC9_epitope_Rep2 1130.6183039677 1130.61720993586 49.779 2 0.25729383211383877 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 41002 20679 HYFDPQYFEF True PC9_epitope_Rep4 1391.58225281215 1391.5811499358601 87.701 2 0.2572837501852859 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I'] 105399 19913 SVADYFKQI True PC9_epitope_Rep2 1069.54441075145 1069.5433099358602 81.991 2 0.25728251524945317 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 22190 12126 ETDEKDFYLY True H1975_Epitope_Rep2 1321.5714133449299 1321.57030993586 51.726 2 0.2572652583809629 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 12594 12806 DLDSRVLYY True H1975_Epitope_Rep2 1142.5607890915799 1142.5596899358602 54.366 2 0.2572500704265376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 73028 15234 NDEELNKLLGR True PC9_epitope_Rep5 1299.67827845531 1299.67663490379 63.607 3 0.25724515850844476 0.00036105427849320016 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4'] 41032 19734 HYIDAGYLGF True PC9_epitope_Rep4 1154.53965972418 1154.53856993586 84.031 2 0.25723029774926826 0.00036105427849320016 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2', 'GTF3C2|p.A731Cfs*26|1|0.4|ENSG00000115207|chr2:27328533-27328534|-/A|frameshift_variant'] 17986 6504 EIGQSVDEVEK True NCI_RA007_Epitope_Rep2 1231.5932114186696 1231.5921099358602 29.908 2 0.2572073089974351 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 71728 3494 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1273.50672275761 1273.50562993586 18.347 2 0.257205668808383 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 21396 10679 ERMPEQIRL True PC9_epitope_Rep4 1170.61792712822 1170.61627490379 48.823 3 0.2571966016708936 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 8578 10820 AVAEEVNAILK True NCI_RA007_Epitope_Rep3 1155.6499384491499 1155.6488499358602 49.608 2 0.25719487143434416 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 22301 14759 ETEEDKFLLL True H1975_Epitope_Rep1 1235.6285342982299 1235.6274299358602 61.994 2 0.2571943438476175 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 73178 5182 NEEEIRANVA True H1975_Epitope_Rep2 1143.55201531303 1143.55090993586 25.005 2 0.257194284304352 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 132697 18504 VYSEAARVLQF True PC9_epitope_Rep4 1281.67173652289 1281.67062993586 79.248 2 0.2571908571663092 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 24166 16507 EYTDVLQKI True PC9_epitope_Rep6 1107.58119018299 1107.58008993586 75.926 2 0.257185935516376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 105053 20028 STIRLLTSL True PC9_epitope_Rep1 1002.60734536118 1002.60624993586 81.865 2 0.25715991228960583 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 11898 6645 DHQREITSL True PC9_epitope_Rep2 1097.54653600977 1097.54542993586 30.969 2 0.2571532315033189 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'CLIP1|p.E1185Gfs*24|1|0.23|ENSG00000130779|chr12:122309804-122309805|-/T|frameshift_variant'] 9920 8883 AYPHNLM[Oxidation]TF True NCI_RA007_Epitope_Rep3 1108.5011664209198 1108.5000699358602 42.03 2 0.25714133653559607 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 72411 14981 MTELPAPLSY True H1975_Epitope_Rep3 1120.5474475265598 1120.54634993586 63.012 2 0.25711087518363135 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 65168 14325 LSDTKYLEMIY True H1975_Epitope_Rep3 1374.6741045916601 1374.6730099358601 60.447 2 0.25710381979918184 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 75945 20640 NRFNYPFEL True PC9_epitope_Rep3 1198.5771078620598 1198.5760099358602 84.664 2 0.25709109853578327 0.00036105427849320016 0.9438714419765777 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 116568 13873 TYGEIFEKF True NCI_RA007_Epitope_Rep2 1132.54407639828 1132.5429699358601 58.615 2 0.2570908410342319 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 114905 6163 TTESQELSRY True H1975_Epitope_Rep3 1212.56224564356 1212.5611499358602 28.718 2 0.257088797373457 0.00036105427849320016 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3'] 49376 20942 KIIDIFTTL True PC9_epitope_Rep4 1062.6324974798601 1062.6314099358601 88.713 2 0.2570724274639708 0.00036105427849320016 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant', 'DNAH5|p.A481T|1|0.13|ENSG00000039139|chr5:13913838-13913838|C/T|missense_variant'] 105323 5745 STVGAGAYAYK True NCI_RA007_Epitope_Rep5 1086.53457434374 1086.53346993586 28.786 2 0.2570691783836965 0.00036105427849320016 0.9438714419765777 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 32134 19873 GFAFVQYVNER True PC9_epitope_Rep1 1328.65133543148 1328.6502299358601 81.259 2 0.2570346645415788 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC'] 2535 4610 AEQVQPPRSP True H1975_Epitope_Rep3 1107.5672714543498 1107.5661699358602 22.855 2 0.25702611856016094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5', 'ENST00000454841.5_1_2:113343759-113346463:+|nuORF', 'ENSG00000125611|ENST00000324913|CHCHD5'] 86711 11424 QRIIQQETL True PC9_epitope_Rep3 1127.62987171091 1127.6287699358602 48.942 2 0.25700062890666237 0.00036105427849320016 0.9438714419765777 ['ENSG00000180182|ENST00000324817|MED14'] 135399 7476 YDNEFGYSNR True NCI_RA007_Epitope_Rep2 1263.5156298043098 1263.51452993586 33.708 2 0.25699697462528437 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'chr12:6537216-6538101|251|78.77|0.54|7.19|+|1|GAPDH,GAPDH|1'] 27979 16440 FQTEGKLYL True PC9_epitope_Rep1 1097.5757108797297 1097.57460993586 68.061 2 0.25699167574583465 0.00036105427849320016 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENST00000474934.1_1_1:26877949-26879989:+|nuORF', 'ENST00000527264.5_1_1:26873736-26880810:+|nuORF', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 104811 12814 STDVSDLLHQY True H1975_Epitope_Rep1 1276.5935457718401 1276.59244993586 54.353 2 0.2569871394774756 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 31156 11714 GDEELDSLIK True NCI_RA007_Epitope_Rep1 1117.5502839775297 1117.54918993586 49.541 2 0.2569370016300899 0.00036105427849320016 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 101995 9162 SPNSILKAA True PC9_epitope_Rep3 899.5076313199099 899.50652993586 40.182 2 0.2569295382134816 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK', 'TTK|p.A401Ffs*17|1|0.11|ENSG00000112742|chr6:80022416-80022416|G/TT|frameshift_variant'] 2254 7226 AENYDIPSADR True NCI_RA007_Epitope_Rep2 1249.55749461629 1249.5563899358601 32.726 2 0.25691728502499184 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 102753 4755 SQEGRPVQV True PC9_epitope_Rep3 998.5145076054997 998.51340993586 23.381 2 0.25689945323230107 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 116716 9351 TYKVISNEF True NCI_RA007_Epitope_Rep3 1099.5549754351498 1099.5538699358601 43.874 2 0.25688744275169145 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 89838 20812 RFLDDLGLKF True PC9_epitope_Rep2 1222.6710082468996 1222.66936490379 85.495 3 0.25688510719252367 0.00036105427849320016 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 43941 6536 ILEQEEYQR True NCI_RA007_Epitope_Rep1 1206.5880664685799 1206.58696993586 29.437 2 0.25686616634931125 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 119384 6443 VENSSTAIGIR True NCI_RA007_Epitope_Rep1 1145.6040508858898 1145.6029499358601 29.083 2 0.2568593546436929 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000553665.5_1_14:58711638-58724717:+|nuORF'] 132718 20369 VYSFGFERL True PC9_epitope_Rep5 1116.56039516876 1116.55928993586 83.384 2 0.256857294435044 0.00036105427849320016 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 56140 11521 LDM[Oxidation]DSIIAEVK True NCI_RA007_Epitope_Rep2 1248.6271547796798 1248.62604993586 49.405 2 0.2568500900512015 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 55963 9884 LDIDSPPITAR True H1975_Epitope_Rep1 1196.6401020414398 1196.63900993586 42.952 2 0.25683398710845173 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 28453 15577 FSEPDFVAKFY True H1975_Epitope_Rep1 1348.63395403184 1348.6328499358601 65.198 2 0.25682456254042896 0.00036105427849320016 0.9438714419765777 ['ENSG00000179933|ENST00000319074|C14orf119'] 56070 11657 LDLEIATYR True H1975_Epitope_Rep3 1092.58152453616 1092.5804299358601 49.974 2 0.2568148982079309 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 39873 11562 HQIEAVDGEEL True PC9_epitope_Rep4 1238.5778957076998 1238.57678993586 52.233 2 0.2568071200920173 0.00036105427849320016 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 72470 12962 M[Oxidation]VADKFTEL True PC9_epitope_Rep4 1068.51614777872 1068.5150499358601 57.752 2 0.2567944527248568 0.00036105427849320016 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 138945 6221 YSEGYPGQRY True H1975_Epitope_Rep2 1218.53055159246 1218.5294499358602 28.895 2 0.25677659362671756 0.00036105427849320016 0.9438714419765777 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 138843 4278 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 21.569 2 0.256768458032108 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 88765 3718 RDHALLEEQSK True NCI_RA007_Epitope_Rep2 1324.6735274280397 1324.67188490379 19.108 3 0.25675007181678494 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 32218 14625 GFGFVTFDDHD True NCI_RA007_Epitope_Rep4 1255.51456717515 1255.51346993586 63.654 2 0.25673577298503836 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 136873 19101 YIYDKDMEII True PC9_epitope_Rep4 1301.6213407428097 1301.62024993586 81.564 2 0.2567199537236527 0.00036105427849320016 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 48658 5768 KELEGVITKA True NCI_RA007_Epitope_Rep4 1086.62847472858 1086.62736993586 28.806 2 0.2566986661023649 0.00036105427849320016 0.9438714419765777 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 65429 5149 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 24.883 2 0.2566934179823775 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 138004 8090 YQAVTATLEEK True NCI_RA007_Epitope_Rep1 1251.63468230783 1251.63358993586 35.466 2 0.2566689980176315 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 132823 11228 VYTGIDHHW True PC9_epitope_Rep5 1126.51959298594 1126.51795490379 48.178 3 0.2566662634598581 0.00036105427849320016 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766226-105766550:+|nuORF'] 35876 20881 GVAESIHLWEV True PC9_epitope_Rep5 1238.62953735774 1238.62844993586 85.371 2 0.25666277418509026 0.00036105427849320016 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 70372 15813 LYQDHMQYI True PC9_epitope_Rep1 1209.54884450889 1209.54774993586 65.638 2 0.2566290822862894 0.00036105427849320016 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 140808 14426 YYSPHGHILVL True PC9_epitope_Rep4 1297.68190728377 1297.68080993586 63.399 2 0.25662525235274525 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 99533 6863 SLEVENQSLR True H1975_Epitope_Rep3 1173.59896550545 1173.5978699358602 31.356 2 0.2566206023679283 0.00036105427849320016 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF', 'ENST00000527741.5_1_8:144663279-144663534:-|nuORF'] 38217 8203 HEVININLK True NCI_RA007_Epitope_Rep2 1078.61349337078 1078.6123899358602 36.544 2 0.2566090097693934 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148834|P78417-2|GSTO1', 'nc|ENSG00000148834|P78417-3|GSTO1', 'ENSG00000148834|ENST00000369713|GSTO1'] 137340 20524 YLKDLIEEV True PC9_epitope_Rep1 1120.6015912743999 1120.6004899358602 83.758 2 0.2566021154948125 0.00036105427849320016 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 26317 13694 FIEFASFEDAK True H1975_Epitope_Rep1 1302.61321858726 1302.6121299358601 57.81 2 0.25652195049970794 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 104761 13796 STDNFTRILEY True H1975_Epitope_Rep2 1357.65139500113 1357.6502899358602 58.213 2 0.2565201460001865 0.00036105427849320016 0.9438714419765777 ['ENSG00000161638|ENST00000293379|ITGA5', 'ITGA5|p.A504Pfs*12|1|0.15|ENSG00000161638|chr12:54404201-54404201|G/-|frameshift_variant'] 10009 14571 AYTLLLHTW True NCI_RA007_Epitope_Rep3 1116.59678067748 1116.59568993586 64.646 2 0.25650606496704015 0.00036105427849320016 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 53548 4730 KVQEMNYIQK True NCI_RA007_Epitope_Rep3 1279.6594575870297 1279.65781490379 25.555 3 0.25650010631089426 0.00036105427849320016 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 53908 19934 KYIESPVLF True PC9_epitope_Rep3 1094.60119735158 1094.60010993586 81.919 2 0.2564987123640995 0.00036105427849320016 0.9438714419765777 ['ENSG00000100304|ENST00000216129|TTLL12'] 119124 7700 VEILANDQGNR True PC9_epitope_Rep1 1227.6207635791898 1227.6196699358602 34.439 2 0.2564962430813798 0.00036105427849320016 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 128424 11849 VSEEIEDIIK True NCI_RA007_Epitope_Rep1 1173.6128842340897 1173.61178993586 50.072 2 0.2564697379509074 0.00036105427849320016 0.9438714419765777 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-3|GGCT'] 135602 7281 YEELQVTAGR True H1975_Epitope_Rep3 1164.5775017848798 1164.57640993586 32.981 2 0.2564608240778155 0.00036105427849320016 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 74899 9813 NLQYYDISAK True NCI_RA007_Epitope_Rep1 1213.5979028762902 1213.5968099358602 42.174 2 0.2564565582306263 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 535 4292 AAQDSTDLVAK True NCI_RA007_Epitope_Rep3 1117.5615173675699 1117.5604299358602 23.614 2 0.25644741825672474 0.00036105427849320016 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 135219 9435 YAYDGKDYL True NCI_RA007_Epitope_Rep4 1106.4920408254197 1106.49094993586 43.151 2 0.2564277440141782 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 131621 9040 VVYQYWNTK True NCI_RA007_Epitope_Rep3 1199.5975089534697 1199.59640993586 42.652 2 0.256406099024158 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 85360 6606 QLDSAQKNLY True H1975_Epitope_Rep3 1178.59315184902 1178.5920499358601 30.362 2 0.2563898904739495 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000251192|Q2M3X9-2|ZNF674', 'ENSG00000251192|ENST00000683375|ZNF674', 'nc|ENSG00000251192|Q2M3X9|ZNF674', 'ENST00000521626.5_1_X:46382546-46401540:-|nuORF', 'nc|ENSG00000147121|Q5JUW0-2|KRBOX4', 'ENSG00000147121|ENST00000344302|KRBOX4', 'ENST00000453909.3_1_X:46387515-46388371:-|nuORF', 'ENST00000522017.5_1_X:46382546-46401540:-|nuORF', 'nc|ENSG00000147121|Q5JUW0-3|KRBOX4'] 36038 9212 GVDSSIFQNPK True NCI_RA007_Epitope_Rep1 1190.59315184902 1190.5920499358601 39.833 2 0.25638762705696116 0.00036105427849320016 0.9438714419765777 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 40694 8250 HTMEFALVK True NCI_RA007_Epitope_Rep5 1074.55320161334 1074.55210993586 38.412 2 0.2563870558263198 0.00036105427849320016 0.9438714419765777 ['ENSG00000182636|ENST00000649030|NDN'] 18296 12717 EITALAPSTMK True PC9_epitope_Rep1 1160.61111041228 1160.61000993586 53.788 2 0.25634340473383127 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 108597 11557 TEIIILATR True NCI_RA007_Epitope_Rep1 1028.62299542532 1028.62188993586 48.923 2 0.2563160651573804 0.00036105427849320016 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 124452 6909 VLETAEDIQER True H1975_Epitope_Rep1 1301.6463096206896 1301.64520993586 31.617 2 0.25627001672264926 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 106838 21577 SYIDLLQRF True PC9_epitope_Rep2 1153.6131590176099 1153.61206993586 88.469 2 0.256261435224745 0.00036105427849320016 0.9438714419765777 ['ENSG00000127580|ENST00000293883|WDR24'] 113665 16460 TRDELEWKL True PC9_epitope_Rep3 1188.6138872935999 1188.61225490379 68.451 3 0.2562608238589728 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 61237 8898 LLDQGQLNKY True H1975_Epitope_Rep2 1190.62953735774 1190.62844993586 39.195 2 0.25625562492664283 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 26291 12495 FIDHDITSQLY True H1975_Epitope_Rep1 1350.6455813447 1350.64448993586 53.102 2 0.25623291249463803 0.00036105427849320016 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 97364 13152 [Acetylation]-SGALDVLQM[Oxidation]K True H1975_Epitope_Rep3 1118.5641609165998 1118.56306993586 55.837 2 0.256199901115216 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF', 'ENST00000489520.2_1_12:66152652-66152778:-|nuORF'] 117091 16339 TYRNVMEQF True PC9_epitope_Rep1 1186.54409348162 1186.54298993586 67.666 2 0.2561802187713763 0.00036105427849320016 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 89646 9066 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 39.826 3 0.2561509158557462 0.00036105427849320016 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 21104 8727 ERDPQSPEF True PC9_epitope_Rep5 1103.4883524273098 1103.48724993586 38.51 2 0.2561392613098504 0.00036105427849320016 0.9438714419765777 ['ENSG00000170903|ENST00000301919|MSANTD4'] 101584 10211 SPEELLLR True H1975_Epitope_Rep3 955.5338460677499 955.53274993586 44.322 2 0.2560993951272645 0.00036105427849320016 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'ENSG00000120756|ENST00000457734|PLS1'] 91621 11852 RPFEDQTSL True PC9_epitope_Rep1 1091.52473793603 1091.52364993586 50.454 2 0.2560983202067956 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 96936 5890 SEVATLTAAGK True H1975_Epitope_Rep3 1046.5607890915799 1046.5596899358602 27.665 2 0.2560949992114883 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 114915 7952 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 35.536 2 0.2560927200368521 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 94635 7045 RYLDKTEQW True NCI_RA007_Epitope_Rep5 1237.6091362663299 1237.60802993586 33.777 2 0.2560884975838908 0.00036105427849320016 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 93749 3039 RTSEIYVHR True NCI_RA007_Epitope_Rep2 1159.6098049726697 1159.60816490379 16.405 3 0.25608640933753724 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 14202 16370 DSTLIM[Oxidation]QLLR True NCI_RA007_Epitope_Rep2 1204.6485589305998 1204.64746993586 68.402 2 0.25608206051850546 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 48057 13764 KALSIFNEL True NCI_RA007_Epitope_Rep3 1033.58079626017 1033.5796899358602 61.468 2 0.25607111695715545 0.00036105427849320016 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 52831 19071 KQVEEIFNLKF True PC9_epitope_Rep4 1393.7605515272896 1393.7594499358602 81.447 2 0.2560691031029734 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 40598 4679 HTDILKEKY True H1975_Epitope_Rep3 1145.60807363717 1145.60641490379 23.122 3 0.256066497813875 0.00036105427849320016 0.9438714419765777 ['DTWD1|p.R271S|1|0.23|ENSG00000104047|chr15:49643476-49643476|A/C|missense_variant', 'nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 53770 16227 KYFEKQFEL True PC9_epitope_Rep1 1230.6284747285797 1230.62736993586 67.235 2 0.2560582269588504 0.00036105427849320016 0.9438714419765777 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 25178 10728 FDVSGYPTLK True H1975_Epitope_Rep1 1125.57062549929 1125.5695299358601 46.228 2 0.2560490641647989 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 41004 19534 HYFDPQYFEF True PC9_epitope_Rep6 1391.58225281215 1391.5811499358601 87.802 2 0.25603740486307486 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I'] 48604 6378 KEIENTYANVA True NCI_RA007_Epitope_Rep3 1250.61428121642 1250.6131899358602 32.09 2 0.2560004606527888 0.00036105427849320016 0.9438714419765777 ['ENSG00000155962|ENST00000369449|CLIC2'] 94007 6195 RVQEAVESMVK True NCI_RA007_Epitope_Rep3 1274.66527124346 1274.6641699358602 31.377 2 0.25598231305165337 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 118526 11106 VDTFLEDVK True NCI_RA007_Epitope_Rep2 1064.5389910178399 1064.5378899358602 47.78 2 0.2559714563959313 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 40807 6862 HVIETLIGK True NCI_RA007_Epitope_Rep3 1008.5967806774798 1008.59568993586 34.101 2 0.2559626631979642 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 49036 9017 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 44.718 2 0.2559619359865663 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 15084 13335 EAC[Carbamidomethyl]GVIVELIK True H1975_Epitope_Rep1 1229.6689599210001 1229.6678699358602 56.399 2 0.25593488314896334 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 116788 21654 TYLPREILNLI True PC9_epitope_Rep4 1343.7812869718698 1343.78018993586 91.484 2 0.2559317155463942 0.00036105427849320016 0.9438714419765777 ['ENSG00000163428|ENST00000295628|LRRC58'] 132904 12149 VYTTTVHWL True NCI_RA007_Epitope_Rep3 1118.5760452329 1118.57494993586 54.904 2 0.255929873790423 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 24212 15437 EYVEKFYRI True PC9_epitope_Rep5 1245.6393737654498 1245.63826993586 64.387 2 0.25592912046078237 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 135233 8812 YAYDGKDYLA True NCI_RA007_Epitope_Rep4 1177.5291546101298 1177.52804993586 40.705 2 0.25592485328625936 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 67602 11761 LTEVDNYHFY True H1975_Epitope_Rep1 1299.5771674317102 1299.57606993586 50.23 2 0.25587883582869325 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 118497 11942 VDSLLENLEK True H1975_Epitope_Rep1 1158.61321858726 1158.6121299358601 50.94 2 0.25579713876157384 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 104935 13422 STGIYEALELR True NCI_RA007_Epitope_Rep1 1250.65066672514 1250.6495699358602 56.213 2 0.2557850402804103 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 41651 14796 IDIIPNPQER True PC9_epitope_Rep2 1193.64043639461 1193.6393299358601 62.176 2 0.25577751285043016 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 56954 9422 LEDVRNGIYP True H1975_Epitope_Rep2 1174.59823722946 1174.5971499358602 41.21 2 0.2557765100194358 0.00036105427849320016 0.9438714419765777 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2', 'ENST00000486701.1_1_2:27663393-27664286:+|nuORF', 'nc|ENSG00000185189|Q9NSY0-2|NRBP2', 'ENST00000423469.6_1_8:144917834-144920143:-|nuORF', 'nc|ENSG00000185189|Q9NSY0-4|NRBP2', 'ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 54312 20840 KYPSPFFVF True PC9_epitope_Rep4 1130.5800679841798 1130.5789699358602 88.314 2 0.25575978982142983 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 54044 19410 KYLSVQGQLF True PC9_epitope_Rep1 1181.64445914589 1181.6433699358602 79.47 2 0.25575573099816307 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 8792 6742 AVFDGAQVTSK True NCI_RA007_Epitope_Rep5 1121.57168812845 1121.5705899358602 32.607 2 0.2557402777014403 0.00036105427849320016 0.9438714419765777 ['ENSG00000175274|ENST00000525680|TP53I11'] 75308 6842 NPTNTVFDAK True NCI_RA007_Epitope_Rep2 1105.5403880001697 1105.53928993586 31.23 2 0.25568388768343947 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000533238.5_1_11:122929516-122932032:-|nuORF', 'ENST00000443628.2_1_X:114011085-114011187:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 24767 18415 FAYDGKDYLTL True PC9_epitope_Rep6 1304.6288686513997 1304.6277699358602 83.479 2 0.255659276129882 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 119120 5366 VEILANDQGNR True NCI_RA007_Epitope_Rep3 1227.6207635791898 1227.6196699358602 28.115 2 0.2556576079169955 0.00036105427849320016 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 64989 11561 LSDFGLERY True H1975_Epitope_Rep2 1098.53457434374 1098.53346993586 49.532 2 0.25564581350540105 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165480|Q8IX90-3|SKA3', 'ENST00000298260.8_1_13:21729833-21750660:-|nuORF', 'ENSG00000165480|ENST00000314759|SKA3'] 49030 9481 KFIDTTSKF True PC9_epitope_Rep4 1085.57571087973 1085.57460993586 44.078 2 0.25564388815966144 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 47222 19142 IYDKFIAQL True PC9_epitope_Rep4 1109.6120963884498 1109.61098993586 81.725 2 0.2556084010676299 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 23905 21186 EYMLEKSFYQF True PC9_epitope_Rep5 1483.6693535643901 1483.66824993586 86.539 2 0.2555948472007404 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 77362 16291 NYLNHWNHF True PC9_epitope_Rep5 1243.55229009655 1243.55065490379 67.657 3 0.2555928452420637 0.00036105427849320016 0.9438714419765777 ['ENSG00000167363|ENST00000300784|FN3K'] 14677 6798 DVNQQEFVR True NCI_RA007_Epitope_Rep4 1133.5465360097699 1133.54542993586 32.774 2 0.2555904859952858 0.00036105427849320016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 69877 14457 LYAPYSTHF True PC9_epitope_Rep6 1097.51819600361 1097.5170899358602 67.497 2 0.25557970549209863 0.00036105427849320016 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 86981 19312 QRVWAEYAL True PC9_epitope_Rep1 1134.5821932425 1134.58108993586 79.088 2 0.25556835075589784 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 132978 18769 VYVDLGGSHVF True PC9_epitope_Rep4 1191.5924235730301 1191.5913299358601 80.278 2 0.2555635293586026 0.00036105427849320016 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 14303 7501 DTDDEIAKY True H1975_Epitope_Rep2 1068.46113461996 1068.4600299358601 33.803 2 0.2555630089762565 0.00036105427849320016 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'ENST00000503126.1_1_5:179133324-179137021:+|nuORF'] 33964 9663 GNEDIITLR True NCI_RA007_Epitope_Rep2 1029.54547338061 1029.54436993586 42.205 2 0.2555367697703616 0.00036105427849320016 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA'] 27685 12329 FQDEVAKAQQL True PC9_epitope_Rep5 1275.64591569787 1275.6448099358602 52.416 2 0.25550529031979236 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 88872 4605 REAEHLYHTL True NCI_RA007_Epitope_Rep5 1267.6309343400699 1267.62928490379 24.385 3 0.255494263108623 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 138006 7522 YQAVTATLEEK True NCI_RA007_Epitope_Rep5 1251.63468230783 1251.63358993586 35.617 2 0.25548806942969854 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 132992 13412 VYVERAEVL True PC9_epitope_Rep5 1076.5866099165999 1076.58550993586 56.606 2 0.25548733226850373 0.00036105427849320016 0.9438714419765777 ['ENSG00000089234|ENST00000419234|BRAP'] 84573 18190 QHDFTSQIF True PC9_epitope_Rep3 1121.51417325233 1121.5130699358601 75.176 2 0.2554611960903757 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 67619 4886 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 23.879 2 0.25543717515760433 0.00036105427849320016 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 62942 5715 LNDGSQITYEK True H1975_Epitope_Rep3 1266.60919583598 1266.60808993586 27.011 2 0.2554231427861656 0.00036105427849320016 0.9438714419765777 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-3|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 26589 7172 FKDLGEENFK True NCI_RA007_Epitope_Rep4 1225.5979028762897 1225.5968099358602 34.21 2 0.2553909071339331 0.00036105427849320016 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 14275 5380 DSYVGDEAQSK True PC9_epitope_Rep5 1197.51496109797 1197.5138699358602 25.708 2 0.255368283325188 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 59315 3507 LGIHEDSQNR True NCI_RA007_Epitope_Rep2 1167.56324870307 1167.56161490379 18.293 3 0.2553633471657587 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 135778 5936 YENEVALRQ True NCI_RA007_Epitope_Rep4 1120.5512870370399 1120.55018993586 29.452 2 0.25536313303227487 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 135257 18291 YAYDGKDYLAL True PC9_epitope_Rep4 1290.6132185872598 1290.6121299358601 78.426 2 0.2553629700382232 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 73058 9043 NDLAVVDVR True NCI_RA007_Epitope_Rep2 999.53490869691 999.53380993586 39.776 2 0.25534346092602517 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 26151 18119 FHNELLTQL True PC9_epitope_Rep4 1113.5818588893299 1113.5807699358602 77.759 2 0.2552973634286636 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 94014 6481 RVQEAVESMVK True NCI_RA007_Epitope_Rep5 1274.66527124346 1274.6641699358602 31.596 2 0.25529484848720585 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 67126 11241 LTDDGNKWLY True H1975_Epitope_Rep3 1223.58225281215 1223.5811499358601 48.341 2 0.2552938361207247 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 26001 20299 FHDDWISSI True PC9_epitope_Rep2 1118.5032742154601 1118.5021699358601 83.502 2 0.25526498735211045 0.00036105427849320016 0.9438714419765777 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 132081 9155 VYIKHPVSL True PC9_epitope_Rep2 1054.61751612206 1054.61640993586 40.553 2 0.25524527135678055 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 28793 17410 FTDEEVDELYR True PC9_epitope_Rep5 1414.6252398229399 1414.62414993586 71.969 2 0.2552402362845785 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 104744 7979 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58082993586 35.661 2 0.2552193654180823 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 18597 13138 ELAEQTLNNIK True PC9_epitope_Rep5 1271.6721304457099 1271.6710299358601 55.539 2 0.25521519517444863 0.00036105427849320016 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 14110 9381 DSDYHDENMYY True H1975_Epitope_Rep1 1450.49832505766 1450.49722993586 40.993 2 0.2552127003510423 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 24285 18941 FAAPEKDIFL True PC9_epitope_Rep4 1149.60701100801 1149.6059099358602 80.944 2 0.2551964169526222 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183826|Q96Q07-3|BTBD9', 'nc|ENSG00000183826|Q96Q07-2|BTBD9', 'ENSG00000183826|ENST00000481247|BTBD9'] 2304 5395 AEQAERYDDM True H1975_Epitope_Rep2 1226.48736645114 1226.48626993586 25.786 2 0.2551817723934563 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 48870 6708 KESYSVYVYK True H1975_Epitope_Rep3 1264.6339540318397 1264.6328499358601 30.756 2 0.25518084335880153 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 49400 17369 KILDLETQL True PC9_epitope_Rep6 1071.61757569171 1071.61646993586 79.425 2 0.25516571503324187 0.00036105427849320016 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 118211 15319 VAYEEFEKV True PC9_epitope_Rep1 1112.5389910178399 1112.5378899358602 63.744 2 0.2551601309429792 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 132694 19693 VYSEAARVLQF True PC9_epitope_Rep1 1281.67173652289 1281.67062993586 80.575 2 0.2551460097090351 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 21309 13439 ERISLQQEL True PC9_epitope_Rep4 1114.59823722946 1114.5971499358602 59.592 2 0.25514066584927697 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 49386 19411 KIIGIMEEV True PC9_epitope_Rep3 1030.5732683515798 1030.57216993586 79.89 2 0.25514041915801317 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 67281 14059 LTDPAIVKV True PC9_epitope_Rep5 954.57498260374 954.57388993586 59.092 2 0.25511824343017037 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 140541 13858 YYLNDLERI True NCI_RA007_Epitope_Rep1 1197.6029882567298 1197.60188993586 57.923 2 0.2550911715582985 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 88868 5071 REAEHLYHTL True H1975_Epitope_Rep3 1267.6309343400699 1267.62928490379 24.623 3 0.2550899315493078 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 97333 13713 SFVNDIFER True NCI_RA007_Epitope_Rep5 1125.5454733806098 1125.54436993586 59.434 2 0.25507047347631706 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 26773 9564 FLDQNLQKY True H1975_Epitope_Rep1 1167.59242357303 1167.5913299358601 41.711 2 0.2550563271841555 0.00036105427849320016 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 14471 6884 DTSRPLGDSM[Oxidation]Y True H1975_Epitope_Rep2 1256.5343170239998 1256.5332099358602 31.4 2 0.2550505881381879 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 34282 11517 GPLQSVQVFGR True NCI_RA007_Epitope_Rep5 1186.6458561282197 1186.64474993586 50.95 2 0.2550456901815506 0.00036105427849320016 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 127126 20524 VQDELHSVLGL True PC9_epitope_Rep3 1208.64010204144 1208.63900993586 84.206 2 0.2550450559081945 0.00036105427849320016 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 112591 9037 TPAQFDADELR True NCI_RA007_Epitope_Rep5 1261.5938801250097 1261.59278993586 41.418 2 0.25501957973807265 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 1817 4459 AEIDNIKNQRA True NCI_RA007_Epitope_Rep4 1270.6629627443401 1270.66132490379 23.525 3 0.2550011226341213 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 53945 5183 KYISKPENL True PC9_epitope_Rep6 1090.60225998074 1090.60116993586 27.683 2 0.2549967610585498 0.00036105427849320016 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 138404 12408 YRDPTTVTTL True PC9_epitope_Rep2 1165.59790287629 1165.5968099358602 53.035 2 0.2549724950690996 0.00036105427849320016 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 18703 19050 ELDETKIIL True PC9_epitope_Rep1 1072.6015912743999 1072.6004899358602 78.067 2 0.25496079469750205 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6', 'ENST00000463014.1_1_7:44246980-44247830:+|nuORF'] 73711 6913 NGTDPEDVIR True H1975_Epitope_Rep3 1114.5254662120199 1114.52436993586 31.551 2 0.2549519865643119 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 106461 18633 SVVELVNKL True PC9_epitope_Rep2 999.5964463243099 999.59534993586 77.037 2 0.2549143476861154 0.00036105427849320016 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 117197 19354 TYTDVTPRQFF True PC9_epitope_Rep2 1373.6615657620098 1373.6604699358602 79.821 2 0.2549135015325762 0.00036105427849320016 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 35748 6479 GTTM[Oxidation]YPGIADR True H1975_Epitope_Rep3 1196.5495731653198 1196.54846993586 29.889 2 0.2549098391990827 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 94139 21656 RWFQPAIPSW True PC9_epitope_Rep1 1286.6560268890996 1286.65492993586 88.129 2 0.2549011671912825 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 116142 12040 TVTDFPGFDER True NCI_RA007_Epitope_Rep1 1282.5829810881398 1282.58188993586 50.819 2 0.25489111550190124 0.00036105427849320016 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 83023 11172 PYKVTQDEL True PC9_epitope_Rep3 1091.54989005471 1091.5487899358602 47.976 2 0.25489092830348264 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 6705 5045 AQDEERQASL True PC9_epitope_Rep1 1145.53127986845 1145.53018993586 24.262 2 0.25489039503096583 0.00036105427849320016 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT'] 94791 10610 RYLQTLTTI True NCI_RA007_Epitope_Rep3 1107.62880908175 1107.6277099358601 48.785 2 0.2548841233339919 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 119011 12976 VEFTRSLFVN True NCI_RA007_Epitope_Rep1 1210.6346227381798 1210.63352993586 54.464 2 0.2548811363303425 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 824 7556 ADDADEFGYSR True NCI_RA007_Epitope_Rep2 1244.4945600065598 1244.49346993586 34.016 2 0.25486399519417474 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 14709 10104 DVQM[Oxidation]LQDAISK True NCI_RA007_Epitope_Rep1 1262.6176527251398 1262.6165499358601 43.313 2 0.25485948504868394 0.00036105427849320016 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 138706 16843 YRVFTTQEL True PC9_epitope_Rep5 1155.5924235730297 1155.5913299358601 69.796 2 0.25485250431718093 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 140817 10212 YYSPTKNEI True PC9_epitope_Rep3 1113.53423999057 1113.5331499358601 44.232 2 0.25484634009371726 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 17774 5711 EHVKEVQQL True PC9_epitope_Rep3 1108.58767254576 1108.58656993586 27.041 2 0.2548400884585419 0.00036105427849320016 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 10054 8246 AYVHMVTHF True NCI_RA007_Epitope_Rep3 1103.52223583823 1103.52112993586 39.569 2 0.25483761249161935 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 9923 9245 AYPHNLM[Oxidation]TF True NCI_RA007_Epitope_Rep5 1108.5011664209198 1108.5000699358602 42.211 2 0.25482222609382044 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 59065 8191 LGDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep2 1269.55471811541 1269.55362993586 36.497 2 0.2548222213237847 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 74845 14397 NLQEAEEWYK True PC9_epitope_Rep4 1308.59863115228 1308.5975299358602 63.287 2 0.2548199029849216 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 65314 10806 LSELEAALQR True NCI_RA007_Epitope_Rep1 1128.6138872935999 1128.61278993586 46.028 2 0.2547971631185464 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 48593 2760 KEIEEYIHKP True H1975_Epitope_Rep2 1284.6714021697198 1284.66976490379 14.644 3 0.25476395511143696 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 53769 16185 KYFDKVVTL True PC9_epitope_Rep5 1111.62774645259 1111.62664993586 67.244 2 0.25475300671790596 0.00036105427849320016 0.9438714419765777 ['ENSG00000166813|ENST00000394412|KIF7'] 109933 11799 THSDAFRVSL True PC9_epitope_Rep2 1131.56727145435 1131.56563490379 50.717 3 0.254736701906013 0.00036105427849320016 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 38072 4243 HEMQIQHPTA True H1975_Epitope_Rep3 1190.55024149122 1190.5491499358602 21.438 2 0.2547303070573936 0.00036105427849320016 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 8731 10199 AVDPTSGQLY True H1975_Epitope_Rep1 1049.50293986229 1049.5023749679299 44.171 1 0.2547256772839137 0.00036105427849320016 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 53106 4054 KSFDEQNVPK True NCI_RA007_Epitope_Rep4 1190.59315184902 1190.5920499358601 21.858 2 0.25472513042091616 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 11417 11365 DFM[Oxidation]IQGGDFTR True H1975_Epitope_Rep1 1301.5710368858895 1301.56992993586 48.692 2 0.25470883771712316 0.00036105427849320016 0.9438714419765777 ['ENSG00000166794|ENST00000300026|PPIB', 'ENST00000561048.1_1_15:64452264-64455191:-|nuORF'] 9697 11043 AYIERMNYI True NCI_RA007_Epitope_Rep5 1171.5695799534699 1171.56848993586 49.112 2 0.25469561184858225 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'ENSG00000176105|ENST00000314574|YES1'] 47529 21582 IYLPYLHEW True PC9_epitope_Rep5 1232.62299542532 1232.62188993586 88.055 2 0.2546920737476559 0.00036105427849320016 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 53959 12977 KYITQGQLLQF True NCI_RA007_Epitope_Rep3 1337.73433677945 1337.7332299358602 58.319 2 0.2546879359251982 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 139892 10443 YVEDPQGNTIY True H1975_Epitope_Rep2 1297.58264673497 1297.58154993586 45.185 2 0.254642865451507 0.00036105427849320016 0.9438714419765777 ['ENSG00000166557|ENST00000299705|TMED3', 'nc|ENSG00000166557|Q9Y3Q3-2|TMED3'] 1547 10104 AEEVLLGVHAA True H1975_Epitope_Rep2 1107.5924235730297 1107.5913299358601 43.859 2 0.2546336730715783 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163626|Q8N8Q8-2|COX18', 'nc|ENSG00000163626|Q8N8Q8-3|COX18', 'ENST00000421792.2_1_4:73934271-73935366:-|nuORF', 'nc|ENSG00000163626|Q8N8Q8-4|COX18', 'nc|ENSG00000163626|Q8N8Q8|COX18', 'ENSG00000163626|ENST00000507544|COX18'] 96607 5261 SEM[Oxidation]EVQDAELK True H1975_Epitope_Rep3 1293.5758474828096 1293.5747499358602 25.319 2 0.25462187631228694 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF', 'ENST00000418595.1_1_6:112937907-112938114:-|nuORF'] 104737 7874 STDKFKTDFY True H1975_Epitope_Rep2 1250.58191845898 1250.58082993586 35.233 2 0.2546193638355376 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 77323 12304 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.6069699358602 55.14 2 0.2545906132537334 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 132139 6929 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5287299358602 33.338 2 0.2545831371884813 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 137135 13493 YLDKEDTFFY True H1975_Epitope_Rep1 1339.5972341699498 1339.59612993586 57.02 2 0.25456913422503036 0.00036105427849320016 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 65433 5289 LSEVNRTGTQY True H1975_Epitope_Rep3 1266.62042922602 1266.6193299358602 25.426 2 0.25456445133287897 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 7469 13999 ASDPIHTFDLY True H1975_Epitope_Rep2 1277.59281749585 1277.59172993586 58.996 2 0.2545458544509101 0.00036105427849320016 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-2|WDR81', 'nc|ENSG00000167716|Q562E7-6|WDR81', 'nc|ENSG00000167716|Q562E7-5|WDR81', 'nc|ENSG00000167716|Q562E7-3|WDR81', 'ENST00000464528.5_1_17:1639209-1640976:+|nuORF'] 101128 12285 [Acetylation]-SLVIPEKFQH True H1975_Epitope_Rep3 1238.66592318276 1238.66482993586 52.432 2 0.2545270464375136 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 41040 17080 HYILHNSFF True PC9_epitope_Rep2 1176.5716285587998 1176.5705299358601 70.949 2 0.25452479586806287 0.00036105427849320016 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 110499 17160 TIQEEFYRV True PC9_epitope_Rep1 1183.5873381925899 1183.58624993586 70.827 2 0.25452371631251136 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 104999 10931 STIFYYVQK True NCI_RA007_Epitope_Rep4 1147.5913609438696 1147.59026993586 48.908 2 0.25452325453354124 0.00036105427849320016 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 70120 18271 LYIVHPTMF True PC9_epitope_Rep6 1119.57868808519 1119.57758993586 82.919 2 0.25446843789384144 0.00036105427849320016 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 89004 7013 REDWKIIRA True H1975_Epitope_Rep2 1185.66184054553 1185.66019490379 31.9 3 0.25444859330771114 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1', 'ENST00000498520.1_1_2:206992517-206997685:-|nuORF'] 87466 12659 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep2 1318.5751192068199 1318.5740299358602 53.79 2 0.25443322420080194 0.00036105427849320016 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 2348 7603 AEQEPQPERLV True H1975_Epitope_Rep1 1294.6517293542997 1294.65062993586 34.236 2 0.254424985149729 0.00036105427849320016 0.9438714419765777 ['ENSG00000124217|ENST00000244051|MOCS3'] 73537 21606 NFIVWLEDQK True PC9_epitope_Rep1 1290.66083748602 1290.6597499358602 87.931 2 0.25441822709407735 0.00036105427849320016 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF'] 69921 21390 LYDIILKNF True PC9_epitope_Rep5 1137.64339651673 1137.6422899358602 87.338 2 0.25441277011804175 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 87467 12763 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep2 1318.5751192068199 1318.5740299358602 54.196 2 0.25439968276202757 0.00036105427849320016 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 107128 17641 SYMLVNENRF True PC9_epitope_Rep3 1271.5968573304701 1271.59576993586 73.047 2 0.25438382768841555 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 107409 17723 SYTRLFSNF True PC9_epitope_Rep6 1133.5505587610498 1133.54946993586 80.805 2 0.25437912619840636 0.00036105427849320016 0.9438714419765777 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 115617 6608 TVIQSTQGMYK True NCI_RA007_Epitope_Rep3 1254.62782310558 1254.62672993586 33.052 2 0.2543585157634265 0.00036105427849320016 0.9438714419765777 ['PGM2L1|p.G354Rfs*3|1|0.29|ENSG00000165434|chr11:74345627-74345628|-/T|frameshift_variant', 'ENSG00000165434|ENST00000298198|PGM2L1'] 43668 20535 IIMLEALERV True PC9_epitope_Rep4 1185.67913040245 1185.6780299358602 87.138 2 0.2543469843226766 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 77077 20501 NWPSRPYLF True PC9_epitope_Rep5 1178.58727862294 1178.5861899358601 83.896 2 0.2543461247543495 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 106953 11537 SYLDRTEQL True PC9_epitope_Rep6 1123.55095268387 1123.54984993586 55.465 2 0.2543412876424213 0.00036105427849320016 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 2329 11601 AEQDLIREL True H1975_Epitope_Rep2 1085.57168812845 1085.5705899358602 49.69 2 0.2543109087758231 0.00036105427849320016 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 22302 14845 ETEEDKFLLL True H1975_Epitope_Rep1 1235.6285342982299 1235.6274299358602 62.333 2 0.2543103569555488 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 38013 8929 HEIESLYTKL True NCI_RA007_Epitope_Rep3 1231.6448530687098 1231.6437499358601 42.205 2 0.25429910937721545 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 74575 13630 NLDIIQQEY True H1975_Epitope_Rep2 1134.55570371114 1134.55460993586 57.566 2 0.2542933556955021 0.00036105427849320016 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 37511 11106 GYIERPQLI True NCI_RA007_Epitope_Rep4 1087.6025943339098 1087.6014899358602 49.596 2 0.2542922694474217 0.00036105427849320016 0.9438714419765777 ['ENSG00000164329|ENST00000453514|TENT2', 'nc|ENSG00000164329|Q6PIY7-2|TENT2'] 117039 8100 TYQEVAQKF True NCI_RA007_Epitope_Rep5 1112.5502244078798 1112.54912993586 37.845 2 0.2542766556605933 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 69210 11231 LVNELTEFAK True H1975_Epitope_Rep3 1162.6233893481399 1162.6222899358602 48.302 2 0.25425448969487735 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 52798 14404 KQTALVELLK True PC9_epitope_Rep5 1141.7070594024499 1141.7054249037901 60.404 3 0.2542458647764879 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 47722 14021 IYQGRLWAF True NCI_RA007_Epitope_Rep3 1152.60801406752 1152.6069099358601 62.458 2 0.254243272642084 0.00036105427849320016 0.9438714419765777 ['ENSG00000240247|ENST00000382689|DEFA1B', 'ENSG00000239839|ENST00000327857|DEFA3', 'ENSG00000206047|ENST00000382692|DEFA1'] 89743 5488 REYQLNDSAA True NCI_RA007_Epitope_Rep4 1165.53636524889 1165.53526993586 27.696 2 0.25422997197453634 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 32952 5141 GISEETTTGVH True NCI_RA007_Epitope_Rep2 1129.52513185885 1129.5240299358602 24.617 2 0.2542078795760688 0.00036105427849320016 0.9438714419765777 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 96403 9056 SEIDMNDIKA True NCI_RA007_Epitope_Rep3 1134.5226893307001 1134.5215899358602 42.713 2 0.25420687181394713 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 71971 15288 MPWGDPNYRSA True PC9_epitope_Rep3 1292.5608061749201 1292.5597099358602 63.956 2 0.2541948621393562 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 16013 11219 EEAENTLQSFR True PC9_epitope_Rep4 1322.61025846514 1322.60916993586 50.93 2 0.25417167948284514 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 114388 5213 TSDNGKDGLAY True H1975_Epitope_Rep1 1139.50948179471 1139.5083899358601 25.115 2 0.2541588696256109 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105325|Q9UM11-3|FZR1', 'ENSG00000105325|ENST00000441788|FZR1', 'nc|ENSG00000105325|Q9UM11|FZR1'] 18304 10879 EITALAPSTMK True PC9_epitope_Rep6 1160.61111041228 1160.61000993586 52.709 2 0.25412837781976105 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 106839 21798 SYIDLLQRF True PC9_epitope_Rep3 1153.6131590176099 1153.61206993586 89.144 2 0.254115546901188 0.00036105427849320016 0.9438714419765777 ['ENSG00000127580|ENST00000293883|WDR24'] 14302 8577 DTDAQQAFKY True H1975_Epitope_Rep3 1185.5302172392899 1185.52912993586 37.982 2 0.254089900854727 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 35439 8641 GTDWGEKGYY True H1975_Epitope_Rep1 1174.4931034545798 1174.49200993586 38.166 2 0.25408094667126424 0.00036105427849320016 0.9438714419765777 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000527141.5_1_11:66331406-66331633:-|nuORF'] 69917 21458 LYDIILKNF True PC9_epitope_Rep1 1137.64339651673 1137.6422899358602 87.379 2 0.25407625031249903 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 111180 22006 TLFEDSFQQI True PC9_epitope_Rep1 1226.58191845898 1226.58082993586 89.469 2 0.254074386607621 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'WWP1|p.K872Vfs*4|1|0.15|ENSG00000123124|chr8:86461789-86461790|AA/-|frameshift_variant', 'ENSG00000123124|ENST00000517970|WWP1', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'ITCH-NCOA6|2|fusion', 'nc|ENSG00000289720|Q96J02-3|ITCH'] 45805 12939 ISPDQLADLYK True H1975_Epitope_Rep3 1261.6554177524097 1261.65432993586 55.0 2 0.25407404864551436 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 67604 11862 LTEVDNYHFY True H1975_Epitope_Rep2 1299.5771674317102 1299.57606993586 50.705 2 0.25407231752664833 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 9760 17652 AYLEAIHNF True PC9_epitope_Rep2 1076.52909504048 1076.52857496793 73.177 1 0.2540636007888547 0.00036105427849320016 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 131943 19967 VYFPDQHINF True PC9_epitope_Rep3 1278.6033226099 1278.6022299358601 82.048 2 0.25406120705173096 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 67625 4967 LTEVSQKENY True H1975_Epitope_Rep3 1209.5877321154098 1209.5866299358602 24.234 2 0.25405789921740884 0.00036105427849320016 0.9438714419765777 ['ENSG00000146278|ENST00000336032|PNRC1', 'nc|ENSG00000146278|Q12796-2|PNRC1'] 61222 9667 LLDPSQKNLY True H1975_Epitope_Rep2 1189.63428838501 1189.6331899358602 42.165 2 0.2540493222867707 0.00036105427849320016 0.9438714419765777 ['ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000277462|ENST00000366503|ZNF670'] 28890 16241 FTDVPSIQIY True H1975_Epitope_Rep2 1181.5968402471299 1181.59574993586 67.679 2 0.25403594802662766 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163539|O75122-2|CLASP2', 'nc|ENSG00000163539|O75122|CLASP2', 'ENSG00000163539|ENST00000682230|CLASP2', 'nc|ENSG00000163539|O75122-3|CLASP2'] 16215 7659 EEFQFIKKA True NCI_RA007_Epitope_Rep3 1138.60225998074 1138.60116993586 37.25 2 0.25401475596161316 0.00036105427849320016 0.9438714419765777 ['ENSG00000140259|ENST00000267812|MFAP1'] 136098 14511 YGEPGEVFINK True PC9_epitope_Rep1 1251.6135529404298 1251.61244993586 60.641 2 0.2540112154932634 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 75586 12636 NQQEFVRAL True PC9_epitope_Rep2 1103.5723568347898 1103.5712499358601 53.914 2 0.2540077065347763 0.00036105427849320016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 72611 9406 M[Oxidation]VVESAYEVIK True H1975_Epitope_Rep1 1282.64789022426 1282.6467899358602 41.092 2 0.2540003198065811 0.00036105427849320016 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB'] 35403 12891 GTDELRLLY True H1975_Epitope_Rep3 1078.56587447202 1078.56476993586 54.81 2 0.25399952038016166 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 27758 6972 FQEALDAAGDK True NCI_RA007_Epitope_Rep2 1163.5458673034298 1163.5447699358601 31.741 2 0.25398736318185494 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN'] 135253 18914 YAYDGKDYLAL True PC9_epitope_Rep2 1290.6132185872598 1290.6121299358601 78.115 2 0.25398145862409616 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 64563 11260 LRDLEDSLAR True PC9_epitope_Rep3 1186.6305999868998 1186.6289549037901 48.319 3 0.25396833150239645 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 68717 9312 LVDEPQNLIK True H1975_Epitope_Rep1 1167.6499384491499 1167.6488499358602 40.725 2 0.25395878521374876 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 12557 8977 DLDHSIGTQY True H1975_Epitope_Rep1 1147.51456717515 1147.51346993586 39.435 2 0.2539261480322738 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4'] 138851 5027 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 24.416 2 0.25392108760576537 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 18300 11630 EITALAPSTMK True PC9_epitope_Rep4 1160.61111041228 1160.61000993586 52.492 2 0.2539147909819421 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 54440 14232 KYTKIFNDF True PC9_epitope_Rep2 1174.60225998074 1174.60116993586 60.01 2 0.25388563857996127 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 65428 5053 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 24.518 2 0.2538688748217062 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 133204 16319 WEALVSPVV True H1975_Epitope_Rep2 998.54368247546 998.54258993586 67.989 2 0.2538669395755483 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 125621 11303 VMEKSFLEY True H1975_Epitope_Rep1 1144.5474475265598 1144.54634993586 48.455 2 0.2538452885283624 0.00036105427849320016 0.9438714419765777 ['ENST00000513342.5_1_17:46990150-47004493:+|nuORF', 'nc|ENSG00000159202|Q9H832-2|UBE2Z', 'ENSG00000159202|ENST00000360943|UBE2Z'] 140816 9119 YYSPTKNEI True PC9_epitope_Rep2 1113.53423999057 1113.5331499358601 40.415 2 0.25384462558818804 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 8062 8708 ATEDPWKTNY True H1975_Epitope_Rep2 1223.54586730343 1223.5447699358601 38.456 2 0.2538344685475899 0.00036105427849320016 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 35498 6891 GTFSTVTSTVK True NCI_RA007_Epitope_Rep3 1126.5870038394198 1126.5859099358602 34.212 2 0.2538282757346483 0.00036105427849320016 0.9438714419765777 ['ENSG00000182934|ENST00000332118|SRPRA', 'nc|ENSG00000182934|P08240-2|SRPRA'] 3797 10807 AGVLAHLEEER True PC9_epitope_Rep2 1222.6305999868998 1222.6289549037901 46.885 3 0.2538267884675767 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 15867 8633 EDLYLKPIQR True NCI_RA007_Epitope_Rep1 1273.70303665117 1273.70140490379 37.582 3 0.2538153534243326 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 116755 14292 TYLEKAIKI True PC9_epitope_Rep5 1077.6433965167298 1077.6422899358602 59.977 2 0.25380406609029615 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 67615 5163 LTEVNKAGTQY True H1975_Epitope_Rep3 1222.61936659686 1222.61826993586 24.96 2 0.25379414884480456 0.00036105427849320016 0.9438714419765777 ['ENSG00000170542|ENST00000380698|SERPINB9'] 56064 16760 LDLDGIIAEVK True NCI_RA007_Epitope_Rep1 1184.66525416012 1184.66414993586 69.318 2 0.2537882785252425 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 77048 7017 NVYEVVNPK True NCI_RA007_Epitope_Rep4 1060.5553097883198 1060.5542099358602 33.619 2 0.2537601480691363 0.00036105427849320016 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 57857 6735 LEQEIATYR True H1975_Epitope_Rep1 1121.57168812845 1121.5705899358602 30.947 2 0.25375312660397065 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16722254-16722455:-|nuORF', 'CON__P35900', 'KRT20|p.R372S|2|0.36|ENSG00000171431|chr17:40878170-40878170|G/T|missense_variant', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__Q61782', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312'] 52830 20145 KQVEEIFNLKF True PC9_epitope_Rep3 1393.7605515272896 1393.7594499358602 82.741 2 0.253741502998142 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 57037 17648 LEEFITPIV True H1975_Epitope_Rep2 1059.58521293427 1059.5841099358602 73.203 2 0.2537347049753329 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'ENST00000491510.1_1_3:25668659-25671642:-|nuORF', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 95909 9737 SDVEAIFSK True H1975_Epitope_Rep3 994.49712620586 994.49602993586 42.476 2 0.25372438648917106 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 132454 16266 VYNSEYYHF True PC9_epitope_Rep3 1220.5138388991602 1220.51274993586 67.704 2 0.25371757937271416 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 49005 21594 KFIDPIYQVW True PC9_epitope_Rep3 1307.69140933831 1307.6903099358601 88.356 2 0.25370659447836863 0.00036105427849320016 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 53581 4261 KVVDSLYNK True NCI_RA007_Epitope_Rep3 1064.5866099165999 1064.58550993586 23.457 2 0.2536987778703998 0.00036105427849320016 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 132987 9034 VYVERAEVL True NCI_RA007_Epitope_Rep4 1076.5866099165999 1076.58550993586 41.582 2 0.25367680858739616 0.00036105427849320016 0.9438714419765777 ['ENSG00000089234|ENST00000419234|BRAP'] 77524 9070 NYQKRFQNL True PC9_epitope_Rep5 1209.6254550368096 1209.6243499358602 39.832 2 0.25366644311610037 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 4672 12694 ALDEGDIALLK True NCI_RA007_Epitope_Rep1 1156.6339540318397 1156.6328499358601 53.36 2 0.25366640731773504 0.00036105427849320016 0.9438714419765777 ['ENSG00000161057|ENST00000292644|PSMC2'] 77471 20066 NYPETLGRLLI True PC9_epitope_Rep4 1287.7186867153098 1287.7175899358601 85.32 2 0.25366079811631487 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 35473 11023 GTFATLSELH True NCI_RA007_Epitope_Rep5 1074.53457434374 1074.53346993586 49.034 2 0.25365684538509836 0.00036105427849320016 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 13151 13560 DLSSVQTLLTK True H1975_Epitope_Rep1 1203.6710678165498 1203.66996993586 57.283 2 0.25360637778867345 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 17438 8278 EHFQDDVFNEK True NCI_RA007_Epitope_Rep1 1406.6102584651396 1406.60916993586 36.199 2 0.2536010824279032 0.00036105427849320016 0.9438714419765777 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 8723 7299 AVDPEDDFQR True NCI_RA007_Epitope_Rep5 1190.5203808315798 1190.5192899358601 34.753 2 0.25359074556837063 0.00036105427849320016 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 23584 20788 EYDNFFQHL True PC9_epitope_Rep3 1211.5247379360299 1211.52364993586 85.232 2 0.2535885439057845 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 139067 20759 YSLEKVFGI True PC9_epitope_Rep2 1054.5698972233 1054.5688099358601 85.291 2 0.25358743772839937 0.00036105427849320016 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 45266 9222 IRYPDSHQL True PC9_epitope_Rep1 1127.57235683479 1127.57071490379 40.324 3 0.25358429582995085 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 13919 20195 DRFEFPEQL True PC9_epitope_Rep2 1179.5560380643099 1179.5549499358601 83.095 2 0.25356278656986897 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 24078 21165 EYQKVWNLF True PC9_epitope_Rep5 1225.6131590176099 1225.61206993586 86.462 2 0.2535590431691281 0.00036105427849320016 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 89362 8513 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 37.7 2 0.253545056351996 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 13920 20426 DRFEFPEQL True PC9_epitope_Rep3 1179.5560380643099 1179.5549499358601 83.822 2 0.2535450064819911 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 131262 7406 VVQEPGQVFK True NCI_RA007_Epitope_Rep4 1129.6131590176099 1129.61206993586 35.13 2 0.2535218547821887 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000570007.1_1_16:28117306-28117714:-|nuORF'] 107127 16828 SYMLVNENRF True PC9_epitope_Rep2 1271.5968573304701 1271.59576993586 69.978 2 0.25352115004916365 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 8258 7469 ATINNPNLLTK True NCI_RA007_Epitope_Rep3 1197.67173652289 1197.67062993586 36.499 2 0.2534958821545327 0.00036105427849320016 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 48878 6806 KESYSVYVYK True NCI_RA007_Epitope_Rep4 1264.6339540318397 1264.63231490379 32.804 3 0.25345288196698695 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 88356 19885 QYMERLQLL True PC9_epitope_Rep5 1192.62742918276 1192.6263299358602 81.54 2 0.25342171173174544 0.00036105427849320016 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 136870 20156 YIYDKDMEII True PC9_epitope_Rep1 1301.6213407428097 1301.62024993586 82.359 2 0.25342032235942213 0.00036105427849320016 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 47884 9018 IYTSSVNRL True PC9_epitope_Rep4 1051.56620882519 1051.5651099358602 42.259 2 0.2534043070037578 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 94136 16151 RWFQPAIPSW True NCI_RA007_Epitope_Rep4 1286.6560268890996 1286.65492993586 70.042 2 0.2533755357883349 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 117629 11903 VAIEHLDKI True PC9_epitope_Rep1 1036.59169529704 1036.5905899358602 50.651 2 0.25337548670495036 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 100133 22629 SLLDIIEKV True PC9_epitope_Rep3 1028.61176203528 1028.6106699358602 92.311 2 0.25335303363630335 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 77547 21799 NYSGAAEYLYF True PC9_epitope_Rep2 1296.56626839484 1296.56516993586 89.323 2 0.25333321208337334 0.00036105427849320016 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 73521 14109 NFGIGQDIQPK True PC9_epitope_Rep5 1215.62478633047 1215.62368993586 59.281 2 0.25331685231176077 0.00036105427849320016 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 119873 10758 VEVTEFEDIK True H1975_Epitope_Rep3 1207.59723416995 1207.59612993586 46.46 2 0.2533139979237413 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 132269 19487 VYLDHAGATLF True PC9_epitope_Rep2 1205.6080736371698 1205.6069699358602 80.339 2 0.2532948763345935 0.00036105427849320016 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 20827 15456 EQPETYYKW True PC9_epitope_Rep5 1242.5557037111398 1242.55460993586 64.462 2 0.2532792960977361 0.00036105427849320016 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1'] 21304 15039 ERISLQQEL True PC9_epitope_Rep1 1114.59823722946 1114.5971499358602 62.666 2 0.2532687661792919 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 23966 12148 EYPDRIMNTF True NCI_RA007_Epitope_Rep4 1284.5808729131597 1284.5797699358602 53.725 2 0.2532641761701597 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 106143 16922 SVPDPELIKTV True PC9_epitope_Rep2 1196.66525416012 1196.66414993586 70.334 2 0.253260410310885 0.00036105427849320016 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 129136 9045 VTDAVALRV True H1975_Epitope_Rep2 942.5498304850599 942.54872993586 39.744 2 0.25325647931175266 0.00036105427849320016 0.9438714419765777 ['ENST00000442885.2_1_11:65655295-65655958:-|nuORF', 'ENST00000528937.1_1_11:65654989-65655958:-|nuORF', 'ENST00000532679.5_1_11:65653270-65655931:-|nuORF', 'ENSG00000172500|ENST00000357519|FIBP', 'nc|ENSG00000172500|O43427|FIBP'] 116823 17470 TYLVDMQRF True PC9_epitope_Rep6 1171.5695799534699 1171.56848993586 79.821 2 0.25324540259932943 0.00036105427849320016 0.9438714419765777 ['ENSG00000180340|ENST00000315323|FZD2'] 139446 6383 YTETEPYHNY True H1975_Epitope_Rep1 1315.5356965425499 1315.5345899358601 29.612 2 0.25321374547902664 0.00036105427849320016 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 14243 4471 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 21.498 2 0.2532046498713748 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 139779 10086 YVDDASWM[Oxidation]RY True H1975_Epitope_Rep1 1320.54448778488 1320.5433899358602 43.732 2 0.2531971942258989 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 2139 11445 AELWGEQAEA True H1975_Epitope_Rep1 1102.49310345458 1102.4925749679298 49.003 1 0.2531755391646241 0.00036105427849320016 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 87395 11151 QTDPVTLQY True H1975_Epitope_Rep1 1063.51858992643 1063.51807496793 47.86 1 0.25316185322489143 0.00036105427849320016 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 106856 16363 SYIEHIFEI True NCI_RA007_Epitope_Rep1 1149.57062549929 1149.5695299358601 67.76 2 0.25315180972447443 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 45170 15080 IRDPFIHEI True PC9_epitope_Rep2 1138.6134933707801 1138.6118549037901 63.263 3 0.25314607653053595 0.00036105427849320016 0.9438714419765777 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 35658 8029 GTMTGMLYK True NCI_RA007_Epitope_Rep3 1000.47217441132 1000.4716749679301 38.674 1 0.2531329237023763 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 94717 12069 RYLEQLHQL True PC9_epitope_Rep2 1198.64585612822 1198.64422490379 51.736 3 0.25305257042253304 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 40594 4562 HTDILKEKY True H1975_Epitope_Rep2 1145.60807363717 1145.60641490379 22.655 3 0.2530376892567174 0.00036105427849320016 0.9438714419765777 ['DTWD1|p.R271S|1|0.23|ENSG00000104047|chr15:49643476-49643476|A/C|missense_variant', 'nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 94630 6805 RYLDKTEQW True NCI_RA007_Epitope_Rep3 1237.6091362663299 1237.60802993586 33.873 2 0.2530298851294658 0.00036105427849320016 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 94138 16157 RWFQPAIPSW True NCI_RA007_Epitope_Rep5 1286.6560268890996 1286.65492993586 68.886 2 0.2530191188491205 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 45217 14543 IRKPYIWEY True PC9_epitope_Rep4 1266.67609362734 1266.6749899358601 63.853 2 0.2530130126762594 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 833 7519 ADEGISFR True NCI_RA007_Epitope_Rep2 893.42429561877 893.42318993586 33.873 2 0.2529843101336323 0.00036105427849320016 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 1440 11196 AEEIAGKWLQA True H1975_Epitope_Rep2 1214.62953735774 1214.62844993586 48.104 2 0.2529782026849366 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 32072 12342 GEVYFADSFDR True NCI_RA007_Epitope_Rep1 1304.5673310239997 1304.56622993586 51.98 2 0.2529594180107728 0.00036105427849320016 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 123785 4807 VITEEEKNFK True NCI_RA007_Epitope_Rep4 1235.63976768827 1235.63812490379 24.925 3 0.25295662319853873 0.00036105427849320016 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000570149.1_1_16:89628679-89629447:+|nuORF'] 114441 5135 TSEDISQTSKY True H1975_Epitope_Rep2 1257.5724759740901 1257.57136993586 24.829 2 0.2529441435400678 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 49445 14732 KIQEILTQV True PC9_epitope_Rep4 1070.63356010902 1070.6324699358602 64.6 2 0.25294292590725936 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136231|O00425-2|IGF2BP3', 'PRKCA-IGF2BP3|1|fusion', 'ENSG00000136231|ENST00000258729|IGF2BP3', 'ENST00000454907.1_1_6:167114584-167114857:-|nuORF'] 77505 17260 NYQGHFHLF True PC9_epitope_Rep1 1161.5355774032498 1161.5344899358602 71.209 2 0.2529427391651387 0.00036105427849320016 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 135188 17996 YAVDAYFREA True PC9_epitope_Rep5 1203.55603806431 1203.5549499358601 74.238 2 0.2529297683442862 0.00036105427849320016 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 93595 4580 RSYHLQIVTK True NCI_RA007_Epitope_Rep3 1243.7037053575098 1243.70206490379 24.904 3 0.25292527944705756 0.00036105427849320016 0.9438714419765777 ['ENSG00000131203|ENST00000518237|IDO1'] 132885 19294 VYTSKSDVWSF True PC9_epitope_Rep5 1317.62411762413 1317.6230299358601 79.258 2 0.2529148761909517 0.00036105427849320016 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 47414 8498 IYIKQIKTF True NCI_RA007_Epitope_Rep3 1152.6906810623198 1152.68958993586 40.5 2 0.2529148309867858 0.00036105427849320016 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 129904 5140 VTLTSEEEAR True NCI_RA007_Epitope_Rep5 1133.5564319871298 1133.55532993586 26.466 2 0.25290772126584316 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 84829 10833 QHLQATGVSL True PC9_epitope_Rep2 1052.56145779792 1052.56036993586 46.988 2 0.2528712633923516 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 35167 6667 GSDDTELRY True H1975_Epitope_Rep3 1054.45671794586 1054.45562993586 30.599 2 0.2528518550546898 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'ENST00000487284.2_1_7:101917466-101926379:+|nuORF'] 18822 8700 ELEDSTLRY True H1975_Epitope_Rep3 1124.5349682665599 1124.5338699358601 38.463 2 0.2528503890766802 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 89174 10591 REIDDYIVQA True H1975_Epitope_Rep2 1220.6037165327198 1220.60260993586 45.761 2 0.2528503592132805 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 23872 20125 EYMEHVYLI True PC9_epitope_Rep5 1195.5583465634297 1195.55724993586 82.459 2 0.25283437072783294 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 53448 10241 KVIDPATATSV True PC9_epitope_Rep2 1100.607739284 1100.60664993586 44.726 2 0.2528265298052008 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 116781 19313 TYLPAPEGLKF True PC9_epitope_Rep4 1234.65977485686 1234.6586699358602 82.394 2 0.25281213578713363 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 123018 20336 VGYDKDFLTI True PC9_epitope_Rep3 1169.5968402471299 1169.59574993586 83.473 2 0.25280138989047063 0.00036105427849320016 0.9438714419765777 ['ENSG00000123066|ENST00000281928|MED13L'] 15900 7748 EDQTEYLEER True NCI_RA007_Epitope_Rep1 1310.5626395663799 1310.56154993586 34.13 2 0.252794100254427 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 132151 9037 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5287299358602 40.108 2 0.2527930722116167 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 40578 13210 HTDDPLTWDY True H1975_Epitope_Rep1 1261.52513185885 1261.5240299358602 55.909 2 0.2527796229850269 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 54784 8371 LAEVEAALEK True H1975_Epitope_Rep3 1071.5811901829898 1071.58008993586 37.182 2 0.2527654584985841 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 89177 10521 REIDDYIVQA True H1975_Epitope_Rep3 1220.6037165327198 1220.60260993586 45.535 2 0.25273212921201493 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 16560 6537 EEQLQQIRAE True NCI_RA007_Epitope_Rep5 1242.6204292260197 1242.6193299358602 31.807 2 0.25273212369277004 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 104996 11340 STIFYYVQK True NCI_RA007_Epitope_Rep2 1147.5913609438696 1147.59026993586 48.7 2 0.25271928033196484 0.00036105427849320016 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 138892 9107 YSDVGRYIDHY True H1975_Epitope_Rep2 1386.62042922602 1386.61879490379 39.982 3 0.2527123481289302 0.00036105427849320016 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 31579 10010 GEFSITYKP True NCI_RA007_Epitope_Rep3 1040.5178616504397 1040.51676993586 46.466 2 0.25269392971805965 0.00036105427849320016 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 77138 14970 NYAWVYYHL True NCI_RA007_Epitope_Rep4 1227.57129420563 1227.57018993586 65.047 2 0.25269005547885737 0.00036105427849320016 0.9438714419765777 ['ENSG00000119917|ENST00000371818|IFIT3'] 133327 16053 WESEPHPYVFF True H1975_Epitope_Rep2 1436.6401020414398 1436.63900993586 66.95 2 0.2526846143037185 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 46207 14044 ITDLPDHLLSY True H1975_Epitope_Rep1 1285.6554177524101 1285.65432993586 59.184 2 0.25267329677378336 0.00036105427849320016 0.9438714419765777 ['ENST00000406829.2_2_7:7812042-7917166:+|nuORF', 'ENSG00000219545|ENST00000682710|UMAD1'] 124427 11746 VLELVSITANK True H1975_Epitope_Rep1 1185.69688864157 1185.6957899358601 50.173 2 0.2526612872082191 0.00036105427849320016 0.9438714419765777 ['ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000556798.1_1_12:57627435-57627797:+|nuORF', 'ENST00000554467.5_1_12:57627324-57627898:+|nuORF'] 135607 6809 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep3 1078.5004977145798 1078.49940993586 31.144 2 0.2526556623220651 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 119012 12115 VEFTRSLFVN True NCI_RA007_Epitope_Rep3 1210.6346227381798 1210.63352993586 54.769 2 0.25265470006931084 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 10926 14224 DAVLLVFANK True H1975_Epitope_Rep1 1088.62299542532 1088.62188993586 59.891 2 0.252639718113583 0.00036105427849320016 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 25611 5922 FETLQAQAGK True H1975_Epitope_Rep3 1091.5611234447497 1091.56002993586 27.788 2 0.25263786566306334 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 140743 19378 YYQNYFEKL True PC9_epitope_Rep3 1266.5920892198599 1266.59098993586 79.761 2 0.25262733247020946 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 72362 9468 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 41.387 2 0.2526076498053498 0.00036105427849320016 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 88354 19439 QYMERLQLL True PC9_epitope_Rep2 1192.62742918276 1192.6263299358602 80.151 2 0.2525956360383141 0.00036105427849320016 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 24176 11452 EYTPRSWNF True NCI_RA007_Epitope_Rep3 1198.54072235334 1198.5396299358601 52.167 2 0.2525650117469622 0.00036105427849320016 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 17509 8672 EHINEGETAM[Oxidation]L True PC9_epitope_Rep2 1258.5499670881397 1258.54886993586 38.722 2 0.25254885927817505 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 138820 8289 YSDKYFDEHY True H1975_Epitope_Rep2 1365.55134660669 1365.54970490379 36.835 3 0.2525468346172741 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 13152 13557 DLSSVQTLLTK True H1975_Epitope_Rep3 1203.6710678165498 1203.66996993586 57.43 2 0.252539983883373 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 71569 9195 MLDSHEELY True H1975_Epitope_Rep2 1135.48557554599 1135.48446993586 40.321 2 0.2525364296946804 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 135822 9030 YEQELKDLAA True H1975_Epitope_Rep2 1178.5819184589798 1178.58082993586 39.686 2 0.25252636565249925 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 22226 13338 ETDLLDIRSEY True H1975_Epitope_Rep1 1352.64597526752 1352.64486993586 56.412 2 0.2525093722475599 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 88352 20382 QYMELFNKI True PC9_epitope_Rep5 1184.5899810448798 1184.5888899358602 83.435 2 0.25250404891023076 0.00036105427849320016 0.9438714419765777 ['ENSG00000124641|ENST00000265350|MED20'] 4822 6674 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep5 1219.5754535599897 1219.57434993586 30.643 2 0.2524754053312 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 119792 7664 VEVEGDNRYIA True H1975_Epitope_Rep2 1263.6095301891498 1263.6084299358602 34.434 2 0.2524647279008179 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 94505 14553 RYIANTVEL True PC9_epitope_Rep5 1077.58185888933 1077.5807699358602 60.978 2 0.25245125228097876 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 135395 7108 YDNEFGYSNR True H1975_Epitope_Rep3 1263.5156298043098 1263.51452993586 32.311 2 0.25244479666122394 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'chr12:6537216-6538101|251|78.77|0.54|7.19|+|1|GAPDH,GAPDH|1'] 135773 5801 YENEVALRQ True H1975_Epitope_Rep2 1120.5512870370399 1120.55018993586 27.302 2 0.2524267017744534 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 48573 9933 KEIDAYIVQA True H1975_Epitope_Rep1 1148.607739284 1148.60664993586 43.143 2 0.2524178697889873 0.00036105427849320016 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF'] 104873 4841 STESLQANVQR True NCI_RA007_Epitope_Rep5 1231.6156781987497 1231.61458993586 25.312 2 0.2524122120588467 0.00036105427849320016 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627907-89628201:+|nuORF'] 25148 9062 FDQLLAEEK True NCI_RA007_Epitope_Rep1 1091.5498900547097 1091.5487899358602 39.253 2 0.2523733474242907 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 45573 12780 ISGLIYEETR True PC9_epitope_Rep4 1179.6135529404298 1179.61244993586 57.02 2 0.2523573634061675 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 101790 10364 SPIENIQRV True PC9_epitope_Rep4 1054.57710786206 1054.5760099358602 47.565 2 0.25235429951603133 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 28264 13878 FRVKYETEL True PC9_epitope_Rep1 1183.62372370131 1183.62262993586 58.221 2 0.2523505708046282 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 70222 21313 LYLPTLTHF True PC9_epitope_Rep1 1103.6015317047502 1103.6004299358601 86.808 2 0.2523332597389435 0.00036105427849320016 0.9438714419765777 ['ENST00000537473.2_1_12:57058103-57058217:-|nuORF'] 49251 17536 KGVDEVTIVNI True PC9_epitope_Rep4 1185.66050313285 1185.6594099358601 75.465 2 0.252329240333376 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 32140 14805 GFAFVTFDDHD True NCI_RA007_Epitope_Rep4 1269.5302172392899 1269.52912993586 64.408 2 0.25232214562682964 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 22901 10099 EVFEDAAEIR True NCI_RA007_Epitope_Rep1 1177.5615173675699 1177.5604299358602 43.294 2 0.25231917544467203 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 54311 21858 KYPSPFFVF True PC9_epitope_Rep3 1130.5800679841798 1130.5789699358602 89.379 2 0.25231693533443184 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 69479 8223 LVSESSDVLPK True NCI_RA007_Epitope_Rep2 1172.6288686514001 1172.6277699358602 36.623 2 0.25229290470678034 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 77640 11939 NYYEQWGK True PC9_epitope_Rep5 1086.47705946762 1086.4759699358601 50.92 2 0.2522619204770156 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 136412 11976 YHFEEVQKL True PC9_epitope_Rep2 1191.5924235730297 1191.5913299358601 51.385 2 0.25224909165327813 0.00036105427849320016 0.9438714419765777 ['ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant'] 140375 16951 YYEKQFPEI True PC9_epitope_Rep5 1215.5811901829898 1215.58008993586 70.22 2 0.2522427697853315 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'nc|ENSG00000141027|O75376-3|NCOR1'] 65431 5348 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 25.618 2 0.2522368112934479 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 73848 13852 NHFMDNTTL True PC9_epitope_Rep1 1091.47059418819 1091.46948993586 58.123 2 0.2522179616158499 0.00036105427849320016 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 7976 12094 ATDLVVLDRY True H1975_Epitope_Rep2 1163.6186383208699 1163.61754993586 51.602 2 0.25220035734147045 0.00036105427849320016 0.9438714419765777 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'ENST00000529206.1_1_14:95595738-95599795:-|nuORF'] 85365 10959 QLDTRVSEFY True H1975_Epitope_Rep1 1256.60371653272 1256.60260993586 47.118 2 0.2521935482248794 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 132273 17635 VYLDHAGATLF True PC9_epitope_Rep6 1205.6080736371698 1205.6069699358602 80.473 2 0.25216956704028815 0.00036105427849320016 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 89367 9008 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 39.601 2 0.25215570183211955 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 3476 10216 [Acetylation]-AGLNSLEAVKR True NCI_RA007_Epitope_Rep1 1198.66698581192 1198.6658899358602 43.749 2 0.25214131948434854 0.00036105427849320016 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 105322 5768 STVGAGAYAYK True NCI_RA007_Epitope_Rep4 1086.53457434374 1086.53346993586 28.806 2 0.2521325574600917 0.00036105427849320016 0.9438714419765777 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 97081 11606 SEYMRNGDFLP True H1975_Epitope_Rep2 1327.5866865695898 1327.58558993586 49.709 2 0.2521180112919819 0.00036105427849320016 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'ENST00000462970.5_1_1:151227258-151237442:+|nuORF', 'ENST00000461434.1_1_1:151227258-151234901:+|nuORF'] 115197 15739 TVATENEVFRV True PC9_epitope_Rep1 1263.64591569787 1263.6448099358602 65.364 2 0.252117483897252 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16'] 35474 16908 GTFATLSELH True PC9_epitope_Rep1 1074.53457434374 1074.53346993586 69.861 2 0.2520870464446325 0.00036105427849320016 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 108089 15635 TDLLLEPYNK True PC9_epitope_Rep4 1204.6339540318397 1204.6328499358601 68.065 2 0.2520860251599255 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 14922 11689 DYLEKYYKF True NCI_RA007_Epitope_Rep3 1267.6124903112698 1267.6108349037902 53.094 3 0.2520635999355844 0.00036105427849320016 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 77263 21971 NYIPRFWTF True PC9_epitope_Rep5 1242.6185787512197 1242.61748993586 89.544 2 0.2520624947983673 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 11985 5336 DHVSIVEPK True NCI_RA007_Epitope_Rep2 1022.53965972418 1022.53856993586 25.375 2 0.2520546726462053 0.00036105427849320016 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF'] 137344 18246 YLKDLIEEV True PC9_epitope_Rep6 1120.6015912743999 1120.6004899358602 82.823 2 0.25202275543600255 0.00036105427849320016 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 21393 11343 ERMPEQIRL True PC9_epitope_Rep2 1170.61792712822 1170.61627490379 48.95 3 0.2520147866903332 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 26016 12282 FHDESTQVQL True PC9_epitope_Rep5 1202.5567663402999 1202.5556699358601 52.231 2 0.25201360602918005 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 25823 10031 FGEENIEVYHS True H1975_Epitope_Rep1 1322.5778957077 1322.57678993586 43.523 2 0.25196573009645173 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 23401 18766 EVVERLLSV True PC9_epitope_Rep2 1042.60225998074 1042.60116993586 77.554 2 0.25195319166840485 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 94895 7615 RYPDNLKHL True PC9_epitope_Rep5 1154.61964138038 1154.61799490379 34.239 3 0.25194672661358225 0.00036105427849320016 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 14112 9540 DSDYHDENMYY True H1975_Epitope_Rep2 1450.49832505766 1450.49722993586 41.667 2 0.25194571778390773 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 27344 7182 FM[Oxidation]ETATESLAK True NCI_RA007_Epitope_Rep1 1242.58020458726 1242.57910993586 31.926 2 0.2519365135045522 0.00036105427849320016 0.9438714419765777 ['CON__Q58D62'] 7974 7906 ATDLTREVY True H1975_Epitope_Rep2 1066.5294889632999 1066.52838993586 35.358 2 0.2519079390244203 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 128422 11269 VSEEIEDIIK True H1975_Epitope_Rep1 1173.6128842340897 1173.61178993586 48.322 2 0.2519019788739506 0.00036105427849320016 0.9438714419765777 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-3|GGCT'] 53902 19365 KYIENLDNITF True PC9_epitope_Rep4 1368.6925315371197 1368.69142993586 82.597 2 0.2518989198673971 0.00036105427849320016 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 129161 5914 VTDDSPKYNY True H1975_Epitope_Rep3 1200.5298828861198 1200.52878993586 27.758 2 0.25189289718166247 0.00036105427849320016 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 138031 8604 YQDPDATSLKY True H1975_Epitope_Rep3 1299.59829679911 1299.5971899358601 38.087 2 0.2518798120199349 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'nc|ENSG00000131778|Q86WJ1-5|CHD1L', 'nc|ENSG00000131778|Q86WJ1-3|CHD1L', 'nc|ENSG00000131778|Q86WJ1-2|CHD1L'] 8518 9639 [Acetylation]-ATVQQLEGR True H1975_Epitope_Rep3 1042.54072266964 1042.5396299358601 42.093 2 0.2518567838975955 0.00036105427849320016 0.9438714419765777 ['ENSG00000164687|ENST00000297258|FABP5'] 41349 11179 IALTDNALIAR True NCI_RA007_Epitope_Rep5 1169.67682190333 1169.67572993586 49.635 2 0.2518404473615225 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7'] 2506 9881 AEQQALRLEV True H1975_Epitope_Rep3 1155.6247863304698 1155.62368993586 43.038 2 0.25181839065098716 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 35344 3877 GSYSKAFAR True NCI_RA007_Epitope_Rep4 985.4981292653698 985.49702993586 21.121 2 0.2518164099149519 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000005175|Q9H6T3-3|RPAP3', 'nc|ENSG00000005175|Q9H6T3-2|RPAP3', 'ENSG00000005175|ENST00000005386|RPAP3'] 17848 12255 EIAQDFKTDLR True PC9_epitope_Rep5 1334.68302948258 1334.6819299358601 52.126 2 0.2518121944968921 0.00036105427849320016 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 53731 20000 KYEELFPAF True PC9_epitope_Rep4 1142.5648118428596 1142.56370993586 85.063 2 0.25180396027863783 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 54299 16395 KYPSPFFVF True NCI_RA007_Epitope_Rep3 1130.5800679841798 1130.5789699358602 72.221 2 0.25180164128223886 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 22231 13227 ETDLLDIRSEY True H1975_Epitope_Rep3 1352.64597526752 1352.64486993586 56.133 2 0.2517952240190105 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 41416 11404 IASPEGQDYLK True PC9_epitope_Rep1 1219.6084675599898 1219.60736993586 48.744 2 0.2517869146446361 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 38731 5128 HHTFYNELR True NCI_RA007_Epitope_Rep1 1215.57850484439 1215.57685490379 24.029 3 0.25177380772886815 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 49399 19641 KILDLETQL True PC9_epitope_Rep5 1071.61757569171 1071.61646993586 80.604 2 0.2517658124364379 0.00036105427849320016 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 90921 14033 RLEIEPEWAY True H1975_Epitope_Rep2 1304.64010204144 1304.63900993586 59.13 2 0.2517394479056458 0.00036105427849320016 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 73016 13424 NDEELNKLLGK True PC9_epitope_Rep2 1271.6721304457099 1271.67049490379 56.919 3 0.2517253022071869 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 87343 11384 QTDADFYQQY True H1975_Epitope_Rep2 1277.52004647841 1277.51894993586 48.839 2 0.2517146153866723 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116809|Q13105-3|ZBTB17', 'ENSG00000116809|ENST00000375743|ZBTB17', 'nc|ENSG00000116809|Q13105-2|ZBTB17'] 19272 12801 ELLLQPVTISR True H1975_Epitope_Rep3 1267.74998684359 1267.74888993586 54.456 2 0.25170995297140225 0.00036105427849320016 0.9438714419765777 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'nc|ENSG00000241553|P59998-2|ARPC4'] 37589 6834 GYSFTTTAER True NCI_RA007_Epitope_Rep3 1131.51965255559 1131.5185499358602 33.991 2 0.2517068258322896 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 26988 18687 FLLDPVKGERL True PC9_epitope_Rep1 1285.73942215989 1285.73776490379 76.67 3 0.25168676643343346 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 35609 12043 GTLDYILQR True NCI_RA007_Epitope_Rep4 1077.5818588893299 1077.5807699358602 53.323 2 0.2516754865325964 0.00036105427849320016 0.9438714419765777 ['ENSG00000140718|ENST00000471389|FTO'] 54274 11311 KYPNVFKKI True PC9_epitope_Rep1 1135.67536535135 1135.67371490379 48.388 3 0.2516717648365369 0.00036105427849320016 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 35338 10928 GSYDPQQIFK True NCI_RA007_Epitope_Rep1 1181.57168812845 1181.5705899358602 46.501 2 0.25166908819723444 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'ENSG00000131653|ENST00000326181|TRAF7'] 65154 5659 LSDSGVTQRY True H1975_Epitope_Rep2 1124.5462016566 1124.5451099358602 26.764 2 0.2516620308805 0.00036105427849320016 0.9438714419765777 ['ENSG00000092094|ENST00000206542|OSGEP', 'ENST00000555656.5_1_14:20915401-20917107:-|nuORF'] 107151 19663 SYNDELQFLEK True PC9_epitope_Rep5 1384.6510606479599 1384.64996993586 80.691 2 0.2516618590752343 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB', 'ENST00000487704.5_1_22:32797732-32808215:-|nuORF', 'ENST00000463455.1_1_22:32804140-32808230:-|nuORF'] 42791 19880 IFIDPGYQTF True PC9_epitope_Rep6 1199.58627556343 1199.5851699358602 89.125 2 0.2516237796686953 0.00036105427849320016 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 106100 20180 SVNDIFERI True PC9_epitope_Rep3 1091.56112344475 1091.56002993586 82.878 2 0.2516216305534562 0.00036105427849320016 0.9438714419765777 ['H2BC8|p.F66S|1|0.36|ENSG00000273802|chr6:26216447-26216447|A/G|missense_variant'] 71201 15675 M[Oxidation]FLSFPTTK True PC9_epitope_Rep6 1086.54196860374 1086.5408699358602 72.503 2 0.2515866651887061 0.00036105427849320016 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 107171 21663 SYNNFFRMF True PC9_epitope_Rep5 1224.53861417836 1224.53750993586 88.374 2 0.2515849171161026 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 59066 10424 LGDLYEEEMR True NCI_RA007_Epitope_Rep1 1253.5598031154097 1253.5587099358602 44.53 2 0.25157376294829364 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 52606 15673 KQALKYFNL True PC9_epitope_Rep1 1123.6389798426299 1123.6378899358601 65.108 2 0.2515706691464153 0.00036105427849320016 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L', 'SEL1L|p.D502H|1|0.09|ENSG00000071537|chr14:81487518-81487518|C/G|missense_variant'] 78912 18465 PFAKPLPTF True PC9_epitope_Rep1 1016.5695033004799 1016.56840993586 75.816 2 0.2515514386276945 0.00036105427849320016 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 49043 15148 KFLDGIYVSEK True PC9_epitope_Rep5 1297.69180326113 1297.69015490379 63.274 3 0.25154903246124166 0.00036105427849320016 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 42675 15335 IEVIEIM[Oxidation]TDR True PC9_epitope_Rep5 1233.62748913285 1233.62638993586 63.996 2 0.2515007548330231 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 30056 20719 FYLEGGFSKF True PC9_epitope_Rep1 1193.57571087973 1193.57460993586 84.52 2 0.25149462391724126 0.00036105427849320016 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 16371 14928 EELEEVIKDI True H1975_Epitope_Rep3 1215.6234489177898 1215.62234993586 62.808 2 0.2514712758778982 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143106|P28066-2|PSMA5', 'ENSG00000143106|ENST00000271308|PSMA5'] 99525 6162 SLETENAGLR True NCI_RA007_Epitope_Rep2 1088.5462016566 1088.5451099358602 28.577 2 0.2514680592242799 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 63099 9131 LNNDIM[Oxidation]LIK True H1975_Epitope_Rep3 1088.58998142532 1088.5888899358602 40.111 2 0.25146020169791317 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 14995 13527 DYTYEELLNR True NCI_RA007_Epitope_Rep1 1314.6091958359798 1314.60808993586 56.625 2 0.25145731768448987 0.00036105427849320016 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 71560 6780 MLDHQPPQY True H1975_Epitope_Rep3 1127.50697969691 1127.50588993586 31.033 2 0.2514232086327972 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 70595 9194 LYYYIQQDTK True H1975_Epitope_Rep1 1333.6554177524097 1333.65432993586 40.272 2 0.25136304122866276 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 32918 5313 GIPHLVTHDAR True NCI_RA007_Epitope_Rep4 1214.65200413782 1214.65036490379 26.996 3 0.25136072427682205 0.00036105427849320016 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENSG00000280969|ENST00000629237|RPS4Y2'] 5368 8850 ALTPDETYVPK True NCI_RA007_Epitope_Rep2 1232.6288686514001 1232.6277699358602 39.073 2 0.2513187860401936 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 140610 13017 YYMKDLPTSF True NCI_RA007_Epitope_Rep4 1263.58456131127 1263.5834699358602 57.172 2 0.25131440060471655 0.00036105427849320016 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 76057 11986 NRLLEATSY True PC9_epitope_Rep2 1065.54547338061 1065.54436993586 51.423 2 0.25130208925060105 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 47880 10326 IYTSSVNRL True PC9_epitope_Rep1 1051.56620882519 1051.5651099358602 44.602 2 0.25129763171515673 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 128392 8422 VSDSKQFTYY True H1975_Epitope_Rep2 1236.56626839484 1236.56516993586 37.347 2 0.2512901477954938 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 48985 11865 KFDQLLAEEK True PC9_epitope_Rep3 1219.6448530687096 1219.64320490379 50.656 3 0.2512867874746916 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 138885 7453 YSDSLVQKGY True H1975_Epitope_Rep1 1158.5557037111398 1158.55460993586 33.667 2 0.2512689766282435 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 76759 10554 NTVELLVEDK True NCI_RA007_Epitope_Rep1 1158.6132185872598 1158.6121299358601 45.036 2 0.2512606986939914 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 93526 5830 RSNPYYIVK True NCI_RA007_Epitope_Rep4 1138.61349337078 1138.6123899358602 29.049 2 0.2512563257761379 0.00036105427849320016 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.D681Mfs*9|1|0.2|ENSG00000108055|chr10:110596475-110596475|G/-|frameshift_variant'] 93617 5870 RTDDITSGY True H1975_Epitope_Rep2 1026.4618033263 1026.4607099358602 27.565 2 0.25124393623021807 0.00036105427849320016 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 86113 11708 QPQPQPYAV True PC9_epitope_Rep5 1026.5134449763398 1026.5123499358601 50.033 2 0.251237475080448 0.00036105427849320016 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 137200 8364 YLDYHMEKY True H1975_Epitope_Rep3 1260.5485101557201 1260.54685490379 37.155 3 0.2512301633723339 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 112369 11164 TNAENEFVTIK True PC9_epitope_Rep6 1264.6299312805597 1264.62882993586 53.894 2 0.25122819985215644 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 57048 10585 LEEGGFFEEK True NCI_RA007_Epitope_Rep1 1183.5397192938296 1183.5386299358602 45.158 2 0.2512237054919049 0.00036105427849320016 0.9438714419765777 ['ENST00000393551.5_1_5:176914951-176916539:-|nuORF', 'ENST00000486828.6_1_5:176910647-176917003:-|nuORF', 'nc|ENSG00000196923|Q9NR12-2|PDLIM7', 'ENSG00000196923|ENST00000355841|PDLIM7'] 89364 8705 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 38.445 2 0.2512167443161353 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 83241 11714 QADIARMLY True H1975_Epitope_Rep3 1079.54336520563 1079.54226993586 50.198 2 0.25121535469342116 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 140836 19687 YYTDIMHTL True PC9_epitope_Rep2 1155.5270464351497 1155.5259499358601 81.112 2 0.2512074597242563 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 47621 14212 IYPELQIERF True NCI_RA007_Epitope_Rep4 1306.6921376142998 1306.69104993586 61.946 2 0.25113516089122445 0.00036105427849320016 0.9438714419765777 ['ENSG00000077420|ENST00000376236|APBB1IP', 'APBB1IP|p.F234L|1|0.35|ENSG00000077420|chr10:26513549-26513549|T/G|missense_variant'] 116818 19728 TYLVDMQRF True PC9_epitope_Rep1 1171.5695799534699 1171.56848993586 80.711 2 0.25112884385416767 0.00036105427849320016 0.9438714419765777 ['ENSG00000180340|ENST00000315323|FZD2'] 24162 17558 EYTDVLQKI True PC9_epitope_Rep4 1107.58119018299 1107.58008993586 75.555 2 0.2510965866182427 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 139279 5179 YTDHQNSSSYY True H1975_Epitope_Rep2 1363.5316737912701 1363.53056993586 24.994 2 0.2510870937624144 0.00036105427849320016 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 131682 20654 VWMRSPLSTF True PC9_epitope_Rep3 1222.61686449906 1222.61576993586 84.717 2 0.2510793886277268 0.00036105427849320016 0.9438714419765777 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF', 'chr15:60364523-60370591|201|71.34|0.76|6.56|-|0|ANXA2,None|1', 'chr15:60364523-60366446|150|115.17|0.14|9.65|-|0|TE_info:SVA_E,SVA_E_dup534,SVA,Retroposon,donor,+,60366446,60366898|ANXA2,None|4'] 11578 10821 DGTGVVEFVR True NCI_RA007_Epitope_Rep2 1077.5454733806098 1077.54436993586 46.694 2 0.25106964709076657 0.00036105427849320016 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 35302 3928 GSSDVIIHR True NCI_RA007_Epitope_Rep5 982.5195929859399 982.51848993586 21.426 2 0.2510691655271233 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1', 'ENST00000532550.1_1_11:601671-606691:+|nuORF'] 94135 15514 RWFQPAIPSW True NCI_RA007_Epitope_Rep3 1286.6560268890996 1286.65492993586 68.584 2 0.25106252982627997 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 83054 16221 PYLFHVVTF True NCI_RA007_Epitope_Rep4 1121.59096702105 1121.5898699358602 70.343 2 0.25105316247336174 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 10045 9431 AYVEKVERL True PC9_epitope_Rep5 1105.6131590176099 1105.61206993586 41.231 2 0.2510518742902357 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 49025 11534 KFIDTTSKF True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 49.375 2 0.25105057442472273 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 48715 5265 KEMQPTHPIRL True H1975_Epitope_Rep3 1348.7285402063599 1348.72690490379 25.334 3 0.25103806176492927 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF'] 77055 5537 NVYYNEATGGK True H1975_Epitope_Rep3 1214.5567663402996 1214.5556699358601 26.346 2 0.2510307850054103 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF'] 67614 5058 LTEVNKAGTQY True H1975_Epitope_Rep2 1222.61936659686 1222.61826993586 24.537 2 0.2510251892031938 0.00036105427849320016 0.9438714419765777 ['ENSG00000170542|ENST00000380698|SERPINB9'] 106842 19712 SYIDLLQRF True PC9_epitope_Rep6 1153.6131590176099 1153.61206993586 88.479 2 0.2510238807816789 0.00036105427849320016 0.9438714419765777 ['ENSG00000127580|ENST00000293883|WDR24'] 139815 19806 YVDDTQFVRF True PC9_epitope_Rep5 1288.60880191316 1288.6077099358602 81.231 2 0.25102250365328876 0.00036105427849320016 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 47527 21572 IYLPYLHEW True PC9_epitope_Rep3 1232.62299542532 1232.62188993586 88.271 2 0.2510209184063484 0.00036105427849320016 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 84938 20853 QHVQEWWEL True PC9_epitope_Rep3 1253.5829215184897 1253.58182993586 85.484 2 0.25101143522768027 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion'] 24826 10948 FDAGELITQR True H1975_Epitope_Rep1 1148.5825871653199 1148.5814899358602 47.075 2 0.25100309872826265 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 139781 12397 YVDDASWMRY True H1975_Epitope_Rep1 1304.54957278488 1304.54846993586 52.718 2 0.2509990924225152 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 77646 19265 NYYKVNWTF True PC9_epitope_Rep4 1233.5818588893296 1233.5807699358602 82.206 2 0.2509817276906334 0.00036105427849320016 0.9438714419765777 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 89202 16336 REIFLSQPILL True H1975_Epitope_Rep1 1327.7863723523099 1327.78526993586 68.193 2 0.25097293945010624 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 12305 9227 DITEEIM[Oxidation]SGAR True H1975_Epitope_Rep1 1236.5656171522799 1236.56450993586 40.401 2 0.2509595093368492 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000493299.1_1_3:184038318-184039070:+|nuORF'] 135095 9580 YALYDATYETK True H1975_Epitope_Rep3 1336.61869789052 1336.6176099358602 41.86 2 0.2509494225121878 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 4215 7505 AIDTIINQK True H1975_Epitope_Rep3 1014.5709598524599 1014.56986993586 33.849 2 0.2509489505997316 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 2306 5402 AEQAERYDDM True H1975_Epitope_Rep3 1226.48736645114 1226.48626993586 25.844 2 0.250931704150047 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 140693 9314 YYQDTPKQI True PC9_epitope_Rep3 1154.5607890915799 1154.5596899358602 40.766 2 0.25093126399710614 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 77647 20329 NYYKVNWTF True PC9_epitope_Rep5 1233.5818588893296 1233.5807699358602 83.233 2 0.2509065658019114 0.00036105427849320016 0.9438714419765777 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 83607 4673 QDVDNASLAR True PC9_epitope_Rep4 1087.52580056519 1087.52470993586 24.504 2 0.25090526412477887 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 131910 17303 VYENVSHFL True PC9_epitope_Rep2 1106.53965972418 1106.53856993586 71.815 2 0.25089230621033354 0.00036105427849320016 0.9438714419765777 ['ENSG00000164933|ENST00000297578|SLC25A32'] 89573 6104 RESEGFEEHVP True H1975_Epitope_Rep2 1314.5840437173 1314.5824049037901 28.456 3 0.25086173526012434 0.00036105427849320016 0.9438714419765777 ['ENSG00000119801|ENST00000261353|YPEL5'] 42548 14324 IESLIAVFQK True H1975_Epitope_Rep1 1146.6648602373 1146.66376993586 60.287 2 0.2508455157003981 0.00036105427849320016 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 16671 4383 EETQPPVALKK True H1975_Epitope_Rep3 1238.6870522338597 1238.6854049037902 21.979 3 0.25083873694355263 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000510079.2_1_4:79102753-79102939:-|nuORF'] 2334 4455 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 22.25 2 0.2508374317401447 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 74738 22084 NLLKLIAEV True PC9_epitope_Rep1 1011.6328318330299 1011.63172993586 89.757 2 0.25082993261084785 0.00036105427849320016 0.9438714419765777 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 48884 3450 KETAEAYLGKK True NCI_RA007_Epitope_Rep2 1236.6714021697196 1236.66976490379 18.076 3 0.25082185067389084 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 39341 6354 HLTDAYFK True NCI_RA007_Epitope_Rep5 993.49198125577 993.49088993586 31.116 2 0.2508121240926288 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 129270 5121 VTDQASHIY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 24.773 2 0.25080047218881973 0.00036105427849320016 0.9438714419765777 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 93750 3549 RTSEIYVHR True NCI_RA007_Epitope_Rep2 1159.6098049726697 1159.60816490379 18.456 3 0.25078855790795107 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 21312 12663 ERISLQQEL True PC9_epitope_Rep6 1114.59823722946 1114.5971499358602 60.174 2 0.25078447739886744 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 9117 5535 AVLKPEAWSRK True NCI_RA007_Epitope_Rep4 1283.73500548579 1283.73334490379 27.885 3 0.2507772354663135 0.00036105427849320016 0.9438714419765777 ['ENST00000407997.3_1_22:39473245-39473314:+|nuORF'] 72388 7556 MTEGSTVNTEY True H1975_Epitope_Rep2 1230.50743318938 1230.50632993586 34.017 2 0.25077632328836374 0.00036105427849320016 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 8579 10901 AVAEEVNAILK True NCI_RA007_Epitope_Rep3 1155.6499384491499 1155.6488499358602 49.954 2 0.2507740116952691 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 29696 12099 FVNVVPTFGK True H1975_Epitope_Rep3 1106.6124307416198 1106.61132993586 51.703 2 0.25077328797011 0.00036105427849320016 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 136415 13108 YHFEEVQKL True PC9_epitope_Rep5 1191.5924235730297 1191.5907749037901 55.424 3 0.25077018421964115 0.00036105427849320016 0.9438714419765777 ['ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant'] 137065 6588 YLAEVATGDDK True H1975_Epitope_Rep3 1180.5611830144 1180.56008993586 30.294 2 0.25076165617201374 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 138353 7847 YRDEFSHQV True PC9_epitope_Rep1 1179.53088594563 1179.52924490379 35.009 3 0.2507234342309506 0.00036105427849320016 0.9438714419765777 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.H813Ifs*24|1|0.36|ENSG00000109111|chr17:28684908-28684908|C/-|frameshift_variant'] 136373 18290 YHDINVYSL True PC9_epitope_Rep1 1122.53457434374 1122.53346993586 75.141 2 0.2507119209897083 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 67196 11705 LTDIFQHDTY True H1975_Epitope_Rep3 1251.57716743171 1251.57606993586 50.163 2 0.25070171148386633 0.00036105427849320016 0.9438714419765777 ['ENSG00000164366|ENST00000296824|CCDC127'] 56071 12159 LDLEIATYR True NCI_RA007_Epitope_Rep1 1092.58152453616 1092.5804299358601 51.262 2 0.2506617578953572 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 56134 11020 LDM[Oxidation]DSIIAEVK True H1975_Epitope_Rep1 1248.6271547796798 1248.62604993586 47.349 2 0.25064523879451645 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000016045', 'CON__H-INV:HIT000292931'] 72422 5050 M[Oxidation]TESYEQEKY True H1975_Epitope_Rep2 1322.5336483176598 1322.53254993586 24.508 2 0.2506393145031372 0.00036105427849320016 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 107136 15186 SYMLVNENRF True PC9_epitope_Rep6 1271.5968573304701 1271.59576993586 70.493 2 0.25060074584339437 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 9774 17995 AYLEAYKEF True PC9_epitope_Rep3 1132.54407639828 1132.5429699358601 74.421 2 0.2505762684324131 0.00036105427849320016 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 85377 17640 QLEDELVSLQK True PC9_epitope_Rep5 1300.6874461566802 1300.68634993586 72.864 2 0.25055789394691547 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 128408 7994 VSDYLRQSY True H1975_Epitope_Rep2 1129.54038800017 1129.53928993586 35.698 2 0.2505496829377556 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant', 'ARID2|p.G803Afs*19|1|0.12|ENSG00000189079|chr12:45850530-45850530|G/-|frameshift_variant'] 48425 12879 KEEDVLKFLAA True H1975_Epitope_Rep1 1261.69180326113 1261.69070993586 54.61 2 0.25054957637778175 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 7837 6927 ATAGIIGVNR True NCI_RA007_Epitope_Rep4 970.5559784946599 970.55488993586 33.267 2 0.25054715800396904 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 21391 12458 ERMPEQIRL True PC9_epitope_Rep1 1170.61792712822 1170.61627490379 52.785 3 0.2505114982537073 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 38734 9427 HHTFYNELR True PC9_epitope_Rep5 1215.57850484439 1215.57685490379 41.216 3 0.2504726872950237 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 72536 11936 MVDPLLTKY True H1975_Epitope_Rep3 1078.57326835158 1078.57216993586 51.067 2 0.25037590025860434 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 71557 6697 MLDHQPPQY True H1975_Epitope_Rep2 1127.50697969691 1127.50588993586 30.669 2 0.25035923579178476 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 71967 15205 MPWGDPNYRSA True PC9_epitope_Rep1 1292.5608061749201 1292.5597099358602 63.307 2 0.25034444586151744 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 22210 7809 ETDHINQIGY True H1975_Epitope_Rep3 1188.54111627616 1188.54000993586 35.02 2 0.2503252392412706 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 116786 22762 TYLPREILNLI True PC9_epitope_Rep1 1343.7812869718698 1343.78018993586 92.363 2 0.25031617772023285 0.00036105427849320016 0.9438714419765777 ['ENSG00000163428|ENST00000295628|LRRC58'] 53907 19491 KYIESPVLF True PC9_epitope_Rep2 1094.60119735158 1094.60010993586 80.354 2 0.25029950274664975 0.00036105427849320016 0.9438714419765777 ['ENSG00000100304|ENST00000216129|TTLL12'] 52713 14623 KQLDDLKVEL True PC9_epitope_Rep2 1199.6761531969898 1199.6750499358602 61.516 2 0.25023063243357196 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 104819 7057 STDVSQPPHVY True H1975_Epitope_Rep3 1228.5724164044402 1228.5713099358602 32.11 2 0.25022967700103294 0.00036105427849320016 0.9438714419765777 ['KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion', 'ENSG00000086200|ENST00000325324|IPO11', 'nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENST00000502862.1_1_5:61811283-61822085:+|nuORF'] 132836 19774 VYTLLTTHL True PC9_epitope_Rep3 1059.5964463243101 1059.5953499358602 81.289 2 0.25022461017982306 0.00036105427849320016 0.9438714419765777 ['KDM2A-C11orf80|3|fusion', 'KDM2A-C11orf80|2|fusion', 'KDM2A-C11orf80|1|fusion', 'nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 14299 8403 DTDAQQAFKY True H1975_Epitope_Rep1 1185.5302172392899 1185.52912993586 37.25 2 0.2502049878859922 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 131806 9067 VYANGIRNI True PC9_epitope_Rep6 1018.5559784946599 1018.55488993586 44.939 2 0.2502016592748446 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 137193 6554 YLDYHM[Oxidation]EKY True H1975_Epitope_Rep2 1276.5434251557201 1276.5423299358602 30.121 2 0.2501947364688115 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 34804 11545 GQTLVVQFTVK True H1975_Epitope_Rep3 1218.6972229947398 1218.6961299358602 49.536 2 0.2501794431146208 0.00036105427849320016 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 105311 5001 STTTGHLIYK True NCI_RA007_Epitope_Rep2 1119.5924235730301 1119.5913299358601 24.076 2 0.2501747405403895 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2'] 14250 4501 DSYVGDEAQSK True NCI_RA007_Epitope_Rep2 1197.51496109797 1197.51437496793 22.139 1 0.2501731819549823 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 79008 17989 PFLQASPHF True PC9_epitope_Rep5 1042.5236157372199 1042.5225099358602 74.211 2 0.25015089090633946 0.00036105427849320016 0.9438714419765777 ['ENSG00000147689|ENST00000690554|FAM83A'] 107135 15103 SYMLVNENRF True PC9_epitope_Rep6 1271.5968573304701 1271.59576993586 70.152 2 0.2501500748837956 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 82155 16802 PTDYADIMMGY True H1975_Epitope_Rep3 1275.51516142211 1275.51406993586 70.181 2 0.25013112597881465 0.00036105427849320016 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 140725 15450 YYQHIVTTL True PC9_epitope_Rep1 1136.5866099166 1136.58550993586 64.249 2 0.25013022497592163 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 138914 7652 YSEDLSDM[Oxidation]HY True H1975_Epitope_Rep3 1274.47613344154 1274.4750299358602 34.415 2 0.2501114126491942 0.00036105427849320016 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 41854 18418 IDTIEIITDR True PC9_epitope_Rep2 1187.63976768827 1187.6386699358602 76.175 2 0.2501105336932093 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 2330 11501 AEQDLIREL True H1975_Epitope_Rep3 1085.57168812845 1085.5705899358602 49.363 2 0.2500877022311741 0.00036105427849320016 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 8079 13753 ATEFIMNEY True H1975_Epitope_Rep2 1116.47976188956 1116.4786699358601 58.046 2 0.2500836472822101 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 45486 14973 ISEQFTAM[Oxidation]FR True PC9_epitope_Rep2 1244.58595867404 1244.58486993586 62.851 2 0.2500820132236346 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 88224 18626 QYASYEFVQRL True PC9_epitope_Rep4 1402.6881148630198 1402.68700993586 79.722 2 0.2500709518052143 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 53760 10971 KYFDEHYEY True PC9_epitope_Rep4 1292.53496826656 1292.5338699358601 49.972 2 0.2500463948439344 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 41096 14046 HYM[Oxidation]PPPYASL True PC9_epitope_Rep2 1190.5430312328997 1190.54192993586 59.308 2 0.2500461925599036 0.00036105427849320016 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 77340 20735 NYLDQIAKF True PC9_epitope_Rep1 1110.5709598524597 1110.5698699358602 84.584 2 0.25003718593415597 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C'] 17715 17826 EHSLVIDTL True PC9_epitope_Rep3 1025.53932537101 1025.53822993586 73.765 2 0.25002964353605694 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 77331 14710 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.6069699358602 61.582 2 0.2500186779057215 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 138005 7971 YQAVTATLEEK True NCI_RA007_Epitope_Rep2 1251.63468230783 1251.63358993586 35.637 2 0.25001609016961923 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 107138 14458 SYM[Oxidation]LVNENRF True PC9_epitope_Rep2 1287.59177233047 1287.5906699358602 60.882 2 0.2500157055703267 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 1574 12525 AEFARIMSI True NCI_RA007_Epitope_Rep3 1036.5375515491999 1036.5364499358602 56.498 2 0.25001317236000453 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 24476 22481 FAIDPHLLLSV True PC9_epitope_Rep2 1223.69140933831 1223.6903099358601 91.963 2 0.25000485188046473 0.00036105427849320016 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 102961 20958 SQIPFPLSL True PC9_epitope_Rep6 1000.5593325396 1000.55822993586 93.405 2 0.24999826443242862 0.00036105427849320016 0.9438714419765777 ['ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 24158 18269 EYTDVLQKI True PC9_epitope_Rep2 1107.58119018299 1107.58008993586 75.593 2 0.24997114587704664 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 9839 19330 AYLLNLNHL True PC9_epitope_Rep4 1069.59202965021 1069.59092993586 82.46 2 0.24995959099620782 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 54435 9379 KYTKIFNDF True NCI_RA007_Epitope_Rep3 1174.60225998074 1174.60116993586 43.983 2 0.249939292330972 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 26681 11401 FLDASGAKLDY True H1975_Epitope_Rep3 1198.5870038394198 1198.5859099358602 48.97 2 0.24992719387460777 0.00036105427849320016 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 39988 5410 HQRITEEL True NCI_RA007_Epitope_Rep4 1024.53015766964 1024.5290699358602 27.38 2 0.24991285437211785 0.00036105427849320016 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 135777 5709 YENEVALRQ True NCI_RA007_Epitope_Rep3 1120.5512870370399 1120.55018993586 29.431 2 0.2499109646397608 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 70126 18973 LYKELGEYF True PC9_epitope_Rep4 1160.5753765265597 1160.57426993586 81.069 2 0.24989623649399867 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 56667 7455 LEAAIAEAEER True H1975_Epitope_Rep3 1200.59863115228 1200.5975299358602 33.654 2 0.24989454960341004 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF'] 140420 13361 YYFEGIKQTF True NCI_RA007_Epitope_Rep5 1294.6233893481397 1294.6222899358602 58.08 2 0.24988717439672783 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 23851 9847 EYLTKVDKL True PC9_epitope_Rep4 1107.6175756917098 1107.61646993586 45.527 2 0.24978904844771177 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 138841 4104 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 20.877 2 0.24978630060302626 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 77431 14781 NYNEKIYEL True PC9_epitope_Rep2 1184.5713537752797 1184.5702499358601 62.118 2 0.249783805019106 0.00036105427849320016 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 67487 13615 LTEITKGWLY True H1975_Epitope_Rep3 1222.65977485686 1222.6586699358602 57.658 2 0.2497818463464774 0.00036105427849320016 0.9438714419765777 ['ENSG00000139263|ENST00000320743|LRIG3', 'nc|ENSG00000139263|Q6UXM1-2|LRIG3'] 26783 10604 FLDSTGSRLDY True H1975_Epitope_Rep1 1272.59863115228 1272.5975299358602 45.742 2 0.24975998388716078 0.00036105427849320016 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 89011 6818 REEDLDAVEA True H1975_Epitope_Rep2 1145.52004647841 1145.51894993586 31.144 2 0.2497415941351567 0.00036105427849320016 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF'] 117033 7729 TYQEVAQKF True NCI_RA007_Epitope_Rep3 1112.5502244078798 1112.54912993586 37.526 2 0.24972708602329072 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 114475 11774 TSETPDYLLKY True H1975_Epitope_Rep1 1328.6499980188 1328.64890993586 50.28 2 0.24969290590977378 0.00036105427849320016 0.9438714419765777 ['ENSG00000105656|ENST00000262809|ELL'] 53699 14206 KYDEIFYNL True NCI_RA007_Epitope_Rep4 1203.5811901829898 1203.58008993586 61.924 2 0.2496846226238599 0.00036105427849320016 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 69213 11791 LVNELTEFAK True NCI_RA007_Epitope_Rep1 1162.6233893481399 1162.6222899358602 49.843 2 0.24968249978158505 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 118215 13972 VAYEEFEKV True PC9_epitope_Rep4 1112.5389910178399 1112.5378899358602 61.649 2 0.24967990314327174 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 14706 9371 DVQM[Oxidation]LQDAISK True H1975_Epitope_Rep1 1262.6176527251398 1262.6165499358601 40.955 2 0.24967028975398325 0.00036105427849320016 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 32497 9727 GGNFGFGDSR True PC9_epitope_Rep2 1012.4362572847999 1012.43516993586 42.757 2 0.2496406084874653 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 45564 9453 ISGLIYEETR True NCI_RA007_Epitope_Rep5 1179.6135529404298 1179.61244993586 42.997 2 0.24963875220806253 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 132165 8755 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5281849037901 41.184 3 0.24961484430092082 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 138788 16967 YSDEFGNLDF True H1975_Epitope_Rep2 1205.4876837209702 1205.4865899358601 70.51 2 0.2496043080427638 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 67392 13532 LTDYDIRFY True H1975_Epitope_Rep2 1204.57643915572 1204.57534993586 57.187 2 0.24959389323598535 0.00036105427849320016 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1'] 80915 15387 PM[Oxidation]FIVNTNVPR True PC9_epitope_Rep1 1302.6754423847801 1302.6743499358602 64.004 2 0.24958041853690704 0.00036105427849320016 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 101816 13453 SPIENIQRVAA True PC9_epitope_Rep5 1196.6513354314802 1196.6502299358601 56.763 2 0.24955535057596 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 23933 14330 EYNNNFHVL True PC9_epitope_Rep4 1148.5250722892001 1148.5239699358601 63.021 2 0.2495461380097618 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 87472 13735 QTETGTPYMLY True H1975_Epitope_Rep2 1302.5802042068199 1302.57910993586 57.977 2 0.2495112676148399 0.00036105427849320016 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 10862 11068 DALNIETAIK True H1975_Epitope_Rep1 1086.5920892198599 1086.59098993586 47.536 2 0.24942935688319728 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 140271 8937 YYAEVETRI True NCI_RA007_Epitope_Rep3 1142.5607890915799 1142.5596899358602 42.239 2 0.2494236905744201 0.00036105427849320016 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 60217 9184 LIDENDNKI True PC9_epitope_Rep1 1072.540053647 1072.53894993586 40.176 2 0.24941974207820086 0.00036105427849320016 0.9438714419765777 ['ENST00000482091.1_1_10:1089912-1094811:-|nuORF', 'nc|ENSG00000067064|Q13907|IDI1', 'ENSG00000067064|ENST00000381344|IDI1'] 140277 13815 YYAEVETRI True PC9_epitope_Rep5 1142.5607890915799 1142.5596899358602 58.158 2 0.24940946046240586 0.00036105427849320016 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 41578 6458 IDEPLEGSEDR True H1975_Epitope_Rep1 1258.56772494682 1258.5666299358602 29.902 2 0.2494074800398764 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 84564 15926 QHDFQAPYL True PC9_epitope_Rep2 1117.5192586327698 1117.5181699358602 66.509 2 0.24939937013751862 0.00036105427849320016 0.9438714419765777 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 96456 11370 SEIPKLPAV True NCI_RA007_Epitope_Rep4 952.5593325395998 952.55822993586 50.647 2 0.24939931957407246 0.00036105427849320016 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 79005 18110 PFLQASPHF True PC9_epitope_Rep1 1042.5236157372199 1042.5225099358602 74.452 2 0.24936423848813338 0.00036105427849320016 0.9438714419765777 ['ENSG00000147689|ENST00000690554|FAM83A'] 6795 18840 AQFEHTILL True PC9_epitope_Rep5 1070.5760452329 1070.57494993586 77.485 2 0.24933873768162723 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 113656 16138 TRDELEWKL True PC9_epitope_Rep1 1188.6138872935999 1188.61225490379 66.89 3 0.24933761496238313 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 62059 19142 LLMEHIQEI True PC9_epitope_Rep5 1124.58998104488 1124.5888899358602 78.664 2 0.24933267644494636 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 106159 15325 SVPDPELIKTV True PC9_epitope_Rep6 1196.66525416012 1196.66414993586 71.076 2 0.24932154633550652 0.00036105427849320016 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 132222 10095 VYKPAQNSW True PC9_epitope_Rep3 1091.5399940773498 1091.5388899358602 43.784 2 0.2493139737282843 0.00036105427849320016 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 53898 14009 KYIENLDNITF True NCI_RA007_Epitope_Rep5 1368.6925315371197 1368.69142993586 60.575 2 0.24929864730936765 0.00036105427849320016 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 38729 4453 HHTFSTEIAK True NCI_RA007_Epitope_Rep2 1169.5829215184901 1169.58127490379 21.954 3 0.24927867513898744 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 69832 13672 LYADVGGKQF True PC9_epitope_Rep1 1096.55530978832 1096.5542099358602 57.444 2 0.2492707980764956 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 104815 13029 STDVSDLLHQY True H1975_Epitope_Rep2 1276.5935457718401 1276.59244993586 55.236 2 0.24925114816868948 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 4357 12092 AIPQLQGYLR True NCI_RA007_Epitope_Rep5 1157.6556925359298 1157.65458993586 53.168 2 0.2492371047644574 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000431036.1_1_22:45298215-45298323:+|nuORF'] 125156 21410 VLPVRYFYL True PC9_epitope_Rep1 1168.6644663144798 1168.6633699358601 87.189 2 0.24923238244018997 0.00036105427849320016 0.9438714419765777 ['ENSG00000178202|ENST00000323468|POGLUT3'] 55495 17105 LAVNM[Oxidation]VPFPR True PC9_epitope_Rep3 1158.62195025994 1158.6208499358602 70.945 2 0.2492147004558645 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 124554 7495 VLGM[Oxidation]DPLPSK True H1975_Epitope_Rep3 1071.56343232431 1071.5623299358601 33.812 2 0.24921124664158942 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 21311 14958 ERISLQQEL True PC9_epitope_Rep5 1114.59823722946 1114.5971499358602 62.538 2 0.249207633222027 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 71708 5168 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 24.954 2 0.24920457548863287 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 75998 20091 NRIQDLLEL True PC9_epitope_Rep4 1112.61897267404 1112.6178699358602 85.412 2 0.24920295772985185 0.00036105427849320016 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 87350 8354 QTDDTWRTEY True H1975_Epitope_Rep3 1313.55240923585 1313.5513099358602 37.118 2 0.2491985967136336 0.00036105427849320016 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 26665 20191 FLASESLIKQI True PC9_epitope_Rep5 1247.71253870571 1247.7114499358602 82.711 2 0.2491940358929965 0.00036105427849320016 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 138918 10217 YSEDLSDMHY True H1975_Epitope_Rep3 1258.48121844154 1258.48012993586 44.347 2 0.24918944400901175 0.00036105427849320016 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 52794 14753 KQTALVELLK True PC9_epitope_Rep3 1141.7070594024499 1141.7054249037901 61.885 3 0.24917531084132616 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 86713 11246 QRIIQQETL True PC9_epitope_Rep5 1127.62987171091 1127.6287699358602 48.249 2 0.24917100664638658 0.00036105427849320016 0.9438714419765777 ['ENSG00000180182|ENST00000324817|MED14'] 61165 11811 LLDISQKNLY True H1975_Epitope_Rep3 1205.66558851329 1205.66448993586 50.578 2 0.24916183035937584 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171291|Q8NDP4|ZNF439', 'ENSG00000171291|ENST00000682736|ZNF439'] 114819 19512 TTDFIFNLY True H1975_Epitope_Rep3 1132.54407639828 1132.5429699358601 81.768 2 0.249159646775069 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 52608 15539 KQALKYFNL True PC9_epitope_Rep5 1123.6389798426299 1123.6378899358601 64.781 2 0.24915118356375743 0.00036105427849320016 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L', 'SEL1L|p.D502H|1|0.09|ENSG00000071537|chr14:81487518-81487518|C/G|missense_variant'] 65383 8812 LSERADWQY True H1975_Epitope_Rep1 1166.5356369729 1166.53452993586 38.819 2 0.2491482597761172 0.00036105427849320016 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 77427 11425 NYNDRYDEI True PC9_epitope_Rep1 1200.5047307674402 1200.50362993586 48.825 2 0.2491392128846849 0.00036105427849320016 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000492798.1_1_9:136217794-136218218:+|nuORF', 'ENST00000463740.5_1_9:136217403-136218218:+|nuORF', 'ENST00000429766.1_1_7:96830042-96830234:-|nuORF', 'ENST00000541658.2_1_14:35704472-35704841:-|nuORF', 'ENST00000482859.1_1_4:113709241-113709472:-|nuORF'] 131921 12828 VYERELQTF True PC9_epitope_Rep4 1183.5873381925899 1183.58624993586 57.205 2 0.24913042389687362 0.00036105427849320016 0.9438714419765777 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 99400 11370 SLEDQVEM[Oxidation]LR True NCI_RA007_Epitope_Rep1 1234.58635259686 1234.58524993586 48.201 2 0.24911277710620636 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 101784 11011 SPIENIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 47.675 2 0.2490713854382422 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 28923 11570 FTEKEVQQWY True H1975_Epitope_Rep2 1356.6350166609998 1356.6339099358602 49.568 2 0.24905200252133636 0.00036105427849320016 0.9438714419765777 ['ENSG00000107130|ENST00000372398|NCS1'] 87324 5911 QTALPGNDRY True H1975_Epitope_Rep2 1133.5465360097699 1133.54542993586 27.723 2 0.24903195476342344 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000155313|Q9UHP3|USP25', 'nc|ENSG00000155313|Q9UHP3-1|USP25', 'ENSG00000155313|ENST00000400183|USP25'] 108530 4967 TEFTPTEKDE True H1975_Epitope_Rep2 1195.52446315251 1195.52336993586 24.188 2 0.24901552745017444 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 116747 9146 TYLEKAIKI True NCI_RA007_Epitope_Rep5 1077.6433965167298 1077.6422899358602 41.83 2 0.2490082667982867 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 54612 10763 LADIQIEQLNR True H1975_Epitope_Rep1 1311.7146639640298 1311.71356993586 46.362 2 0.2490076910443766 0.00036105427849320016 0.9438714419765777 ['ENST00000514611.1_1_5:139625581-139680122:-|nuORF', 'ENST00000507185.1_1_5:139661015-139682658:-|nuORF', 'ENSG00000113068|ENST00000261813|PFDN1'] 24324 7828 FADLSEAANR True NCI_RA007_Epitope_Rep1 1092.5199869087598 1092.5188899358602 34.44 2 0.2489981342198824 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 114916 8049 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 35.909 2 0.24899288916442483 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 107480 10102 TAAENEFVVLK True H1975_Epitope_Rep1 1219.64485306871 1219.6437499358601 43.795 2 0.24898432098545142 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF', 'CON__Q6IME9'] 115602 21550 TVIKDLLGL True PC9_epitope_Rep1 970.6062827320198 970.60518993586 87.714 2 0.2489754519526873 0.00036105427849320016 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61705957-61719950:-|nuORF'] 33987 17371 GNFNYVEFTR True PC9_epitope_Rep5 1245.5778361380499 1245.5767299358602 71.819 2 0.24897070057043988 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 108828 4749 TEQQQRFHEI True H1975_Epitope_Rep2 1314.6316626160599 1314.6305699358602 23.357 2 0.24893999266887049 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 93615 8110 RTAVPSFLTK True NCI_RA007_Epitope_Rep4 1118.64479349906 1118.64368993586 37.982 2 0.24892572258637885 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 53875 17323 KYIDFDHVF True PC9_epitope_Rep6 1182.57095985246 1182.5693249037902 79.246 3 0.24892206948897314 0.00036105427849320016 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 88871 5447 REAEHLYHTL True NCI_RA007_Epitope_Rep4 1267.6309343400699 1267.62928490379 27.532 3 0.2489215707362109 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 4816 5324 ALEQQVEEM[Oxidation]K True NCI_RA007_Epitope_Rep2 1219.5754535599897 1219.57434993586 25.331 2 0.2489207422919092 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 137884 9883 YPNDNFFEGK True H1975_Epitope_Rep1 1229.5353026197297 1229.5342099358602 42.948 2 0.24891816223897914 0.00036105427849320016 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 137049 18398 YKVEYPIMY True PC9_epitope_Rep4 1204.58383303528 1204.58272993586 78.833 2 0.24891775195924215 0.00036105427849320016 0.9438714419765777 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 113783 15420 TRDQFLDTL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 71.469 2 0.24891422956892517 0.00036105427849320016 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 104262 8740 SSDSVGGFRY True H1975_Epitope_Rep2 1073.47778774361 1073.4766899358601 38.58 2 0.24886602660625304 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1'] 12060 12439 DIEDVFYK True H1975_Epitope_Rep1 1027.48622716899 1027.4851299358602 52.884 2 0.24885689111076154 0.00036105427849320016 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 6796 16392 AQFEHTILL True PC9_epitope_Rep6 1070.5760452329 1070.57494993586 75.442 2 0.24884040769159946 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 4823 11375 ALEQQVEEMK True PC9_epitope_Rep3 1203.58053855999 1203.57944993586 48.757 2 0.24882349202488316 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 23930 15828 EYNNNFHVL True PC9_epitope_Rep3 1148.5250722892001 1148.5239699358601 66.037 2 0.24881108656811912 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 44944 7457 IQEVADELQK True NCI_RA007_Epitope_Rep1 1171.6084675599898 1171.60736993586 33.002 2 0.24881066600526916 0.00036105427849320016 0.9438714419765777 ['ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 72804 18240 NAIDRLVNI True PC9_epitope_Rep4 1026.5821932425 1026.58108993586 78.229 2 0.24880744610901623 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 61148 14205 LLDEVFFSEK True H1975_Epitope_Rep3 1225.6230549949698 1225.6219499358601 59.977 2 0.24878604304556534 0.00036105427849320016 0.9438714419765777 ['ENST00000560033.5_1_15:78834730-78834988:+|nuORF', 'ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4'] 132882 19387 VYTSKSDVWSF True PC9_epitope_Rep3 1317.62411762413 1317.6230299358601 79.795 2 0.24876877189358662 0.00036105427849320016 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 105402 19205 SVADYFKQI True PC9_epitope_Rep4 1069.54441075145 1069.5433099358602 81.972 2 0.24875673721600572 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 88262 20305 QYFDSRGMFI True PC9_epitope_Rep2 1262.5753936098997 1262.5742899358602 83.527 2 0.24875173510051057 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18', 'ENST00000497508.1_1_2:669582-669891:-|nuORF'] 129972 7595 VTNWDDMEK True NCI_RA007_Epitope_Rep4 1136.4808245187198 1136.4797299358602 35.865 2 0.24874330716574583 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 140390 18907 YYEYNHDLF True PC9_epitope_Rep1 1262.5244035828598 1262.5233099358602 77.511 2 0.24873525880042174 0.00036105427849320016 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 139375 5546 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 26.34 2 0.24871995465964172 0.00036105427849320016 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 113099 12527 TQAENQNWHL True PC9_epitope_Rep5 1239.5632487030698 1239.5621499358601 53.184 2 0.24871849553532777 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135269|Q9UGI8-2|TES', 'ENSG00000135269|ENST00000358204|TES'] 31225 16424 GDLGIEIPAEK True PC9_epitope_Rep1 1140.60265390356 1140.60154993586 67.998 2 0.2487182300126953 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 77634 11820 NYYEQWGK True PC9_epitope_Rep1 1086.47705946762 1086.4759699358601 50.333 2 0.2486690662994181 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 63212 5455 LNVTEQEKIDK True NCI_RA007_Epitope_Rep1 1315.69834519355 1315.69669490379 25.292 3 0.24865096664938374 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 67248 17234 LTDLVDDNYFY True H1975_Epitope_Rep3 1376.6136125100802 1376.61250993586 71.933 2 0.2486442853996451 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 137111 15261 YLDDPTNSWY True H1975_Epitope_Rep2 1272.52988288612 1272.52878993586 63.86 2 0.24864351176697805 0.00036105427849320016 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 91285 20773 RLYDGLFKVI True PC9_epitope_Rep1 1222.70739375562 1222.70575490379 84.731 3 0.24863717035259827 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 139661 9477 YTSYPM[Oxidation]HDFY True H1975_Epitope_Rep2 1338.5226897111402 1338.5215899358602 41.422 2 0.24861925702481913 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 29000 18751 FTIFRTISV True PC9_epitope_Rep6 1082.6124307416198 1082.61132993586 84.766 2 0.24861882260999535 0.00036105427849320016 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 47507 15365 IYLEKLKTI True PC9_epitope_Rep5 1119.69034670915 1119.68924993586 64.111 2 0.24861453706822426 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 118218 13146 VAYEEFEKV True PC9_epitope_Rep6 1112.5389910178399 1112.5378899358602 62.208 2 0.2486134484419603 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 89721 9612 REYQELMNV True NCI_RA007_Epitope_Rep3 1180.55465816532 1180.5535699358602 44.891 2 0.24857498570950126 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 132647 15066 VYQHLFTRI True PC9_epitope_Rep5 1175.6451278522297 1175.64349490379 62.958 3 0.24857434373423143 0.00036105427849320016 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 140733 15363 YYQHIVTTL True PC9_epitope_Rep5 1136.5866099166 1136.58550993586 64.103 2 0.2485620168714781 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 84235 4891 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 23.897 2 0.24853747242399216 0.00036105427849320016 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 46822 14653 IVEDGDIIFFK True H1975_Epitope_Rep1 1294.6809042242596 1294.67980993586 61.576 2 0.24851585737008153 0.00036105427849320016 0.9438714419765777 ['ENSG00000138430|ENST00000284719|OLA1', 'ENST00000497760.1_1_2:174940156-174943911:-|nuORF', 'ENST00000396387.2_1_22:42503789-42504386:-|nuORF', 'ENST00000392560.6_1_2:174940156-174989039:-|nuORF', 'nc|ENSG00000138430|Q9NTK5-2|OLA1'] 125627 12031 VM[Oxidation]ENFVAFVDK True H1975_Epitope_Rep3 1313.6325745132897 1313.6314699358602 51.438 2 0.24851304176908356 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 93525 5281 RSNPYYIVK True NCI_RA007_Epitope_Rep3 1138.61349337078 1138.6123899358602 27.78 2 0.24850562347583866 0.00036105427849320016 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.D681Mfs*9|1|0.2|ENSG00000108055|chr10:110596475-110596475|G/-|frameshift_variant'] 135579 5888 YEEIDNAPEER True H1975_Epitope_Rep3 1363.5891886673896 1363.5880899358601 27.657 2 0.2485006556302046 0.00036105427849320016 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 132459 16211 VYNSEYYHF True PC9_epitope_Rep5 1220.5138388991602 1220.51274993586 67.348 2 0.24849957612454485 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 128450 15965 VSEPRYFQL True PC9_epitope_Rep6 1137.5818588893299 1137.5807699358602 73.709 2 0.2484992910588927 0.00036105427849320016 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF', 'ENST00000478389.5_1_20:57566845-57568278:+|nuORF'] 40442 6625 HSDLLEDSKY True H1975_Epitope_Rep3 1205.55643198713 1205.55532993586 30.435 2 0.2484978834867341 0.00036105427849320016 0.9438714419765777 ['ENSG00000171428|ENST00000307719|NAT1'] 68680 8886 LVDAFVEHRY True H1975_Epitope_Rep2 1247.62987171091 1247.62822490379 39.15 3 0.24848109635966087 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 47894 15742 IYVHDLLTF True NCI_RA007_Epitope_Rep5 1119.59644632431 1119.5953499358602 67.268 2 0.24847636001596796 0.00036105427849320016 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 88377 12209 QYNPKFQTL True PC9_epitope_Rep2 1137.58185888933 1137.5807699358602 52.273 2 0.24846806346693157 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 124428 11760 VLELVSITANK True H1975_Epitope_Rep3 1185.69688864157 1185.6957899358601 50.378 2 0.24845691928914934 0.00036105427849320016 0.9438714419765777 ['ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000556798.1_1_12:57627435-57627797:+|nuORF', 'ENST00000554467.5_1_12:57627324-57627898:+|nuORF'] 28193 17850 FRQEYLDTL True PC9_epitope_Rep1 1183.5873381925896 1183.58624993586 73.454 2 0.24843763238251637 0.00036105427849320016 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 52812 19873 KQVEDDIQQLL True PC9_epitope_Rep1 1327.6983451935498 1327.69724993586 81.259 2 0.24841387408467136 0.00036105427849320016 0.9438714419765777 ['ENSG00000161057|ENST00000292644|PSMC2', 'ENST00000460021.1_1_7:102994369-103002536:+|nuORF'] 132363 20003 VYMDWYEKF True PC9_epitope_Rep4 1279.5583465634297 1279.55724993586 85.074 2 0.24835248752504727 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 77514 14675 NYQGHFHLF True PC9_epitope_Rep4 1161.5355774032498 1161.5344899358602 64.383 2 0.24832112090271244 0.00036105427849320016 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 42417 4698 IEQAYDNPHEA True H1975_Epitope_Rep2 1285.55749461629 1285.5563899358601 23.164 2 0.24827369534209315 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 26002 20650 FHDDWISSI True PC9_epitope_Rep3 1118.5032742154601 1118.5021699358601 84.701 2 0.24827295583590223 0.00036105427849320016 0.9438714419765777 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 2350 7774 AEQEPQPERLV True H1975_Epitope_Rep3 1294.6517293542997 1294.65062993586 34.887 2 0.24825701406464767 0.00036105427849320016 0.9438714419765777 ['ENSG00000124217|ENST00000244051|MOCS3'] 89610 6067 RESYDAPPTP True H1975_Epitope_Rep2 1131.5196525555898 1131.5185499358602 28.314 2 0.24825399117760014 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124535|Q96S55-2|WRNIP1', 'ENSG00000124535|ENST00000380773|WRNIP1'] 129432 12107 VTEKDLLLY True H1975_Epitope_Rep1 1092.60667665484 1092.60556993586 51.583 2 0.24824768295473196 0.00036105427849320016 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 35639 11538 GTMDMSITRL True NCI_RA007_Epitope_Rep3 1123.53656557303 1123.5354699358602 52.513 2 0.2482067213505943 0.00036105427849320016 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 26687 12057 FLDDGHTFNY True H1975_Epitope_Rep2 1227.51965255559 1227.5185499358602 51.459 2 0.24818075358666045 0.00036105427849320016 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 127359 12000 VQPSKYHFL True PC9_epitope_Rep1 1117.5920296502102 1117.59092993586 51.02 2 0.24817115198024475 0.00036105427849320016 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 37585 6901 GYSFTTTAER True H1975_Epitope_Rep1 1131.51965255559 1131.5185499358602 31.584 2 0.24815953613727912 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 47740 14627 IYQKPFQTL True PC9_epitope_Rep1 1136.62299542532 1136.62188993586 61.085 2 0.24813424816536833 0.00036105427849320016 0.9438714419765777 ['ATL2|p.K282Nfs*32|1|0.35|ENSG00000119787|chr2:38310406-38310406|C/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'nc|ENSG00000119787|Q8NHH9-3|ATL2'] 21726 11359 ESAFRKLDELY True H1975_Epitope_Rep2 1369.6877805098497 1369.6866899358602 48.741 2 0.2481316787003231 0.00036105427849320016 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF', 'ENST00000567229.5_1_15:66791747-66793486:-|nuORF'] 2507 11270 AEQQERFFMP True H1975_Epitope_Rep1 1281.5812072663298 1281.58010993586 48.327 2 0.24812551859116383 0.00036105427849320016 0.9438714419765777 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF'] 116600 17960 TYGEIFEKF True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 81.711 2 0.24811762915541857 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 91628 10428 RPFEDQTSL True PC9_epitope_Rep4 1091.52473793603 1091.52364993586 47.821 2 0.248102095470326 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 37596 9171 GYSFTTTAER True PC9_epitope_Rep2 1131.51965255559 1131.5185499358602 40.614 2 0.24808172503211778 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 138858 4518 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 22.499 2 0.2480777515154257 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 74747 19119 NLLPKLHIV True PC9_epitope_Rep3 1045.66480066765 1045.6637099358602 78.764 2 0.2480744584330541 0.00036105427849320016 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 51842 6972 KKLADPVTL True NCI_RA007_Epitope_Rep4 983.60153170475 983.60042993586 33.444 2 0.24807276393338953 0.00036105427849320016 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 28888 13277 FTDVNSILRY True H1975_Epitope_Rep3 1226.62953735774 1226.62844993586 56.327 2 0.24805406889062226 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 16937 5626 EGELTVAQGR True NCI_RA007_Epitope_Rep2 1058.5356369728997 1058.53452993586 26.497 2 0.24805376608758112 0.00036105427849320016 0.9438714419765777 ['ENSG00000176619|ENST00000325327|LMNB2'] 135780 8222 YENEVALRQ True PC9_epitope_Rep1 1120.5512870370399 1120.55018993586 36.458 2 0.24801853728470397 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 125811 6807 VNLPINGNGKQ True NCI_RA007_Epitope_Rep5 1152.62512068364 1152.62402993586 32.869 2 0.248014876627449 0.00036105427849320016 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 48927 7341 KEYAVNEVVA True H1975_Epitope_Rep2 1120.57643915572 1120.57534993586 33.178 2 0.24800908495708035 0.00036105427849320016 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 131850 18543 VYAVIPAEKF True PC9_epitope_Rep3 1135.62774645259 1135.62664993586 76.545 2 0.24800767345670613 0.00036105427849320016 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 136381 15742 YHDINVYSL True PC9_epitope_Rep6 1122.53457434374 1122.53346993586 72.778 2 0.2479856939969785 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 32655 7510 GHLEKAVVL True PC9_epitope_Rep4 964.5705659296399 964.56946993586 36.254 2 0.24797647883306748 0.00036105427849320016 0.9438714419765777 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'ENSG00000134107|ENST00000256495|BHLHE40', 'ENSG00000123095|ENST00000242728|BHLHE41'] 89852 20737 RFLNDPGHLLW True PC9_epitope_Rep1 1366.7146043943799 1366.71295490379 84.591 3 0.24797207046831096 0.00036105427849320016 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 135597 11614 YEELQSLAGK True PC9_epitope_Rep2 1136.5713537752797 1136.5702499358601 50.0 2 0.24796520103592026 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 94598 15980 RYKLYQEMF True PC9_epitope_Rep2 1276.6274291827597 1276.6263299358602 66.72 2 0.2479480424425907 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 20697 8572 EQISDIDDAVR True H1975_Epitope_Rep1 1259.59935942827 1259.5982699358601 37.899 2 0.24792859633656714 0.00036105427849320016 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 77330 14614 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.6069699358602 61.213 2 0.24791969270359673 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 14652 9293 DVNAAIATIK True NCI_RA007_Epitope_Rep5 1014.57095985246 1014.56986993586 42.391 2 0.24791962463027473 0.00036105427849320016 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 72801 19585 NAIDRLVNI True PC9_epitope_Rep1 1026.5821932425 1026.58108993586 80.161 2 0.24791765574033747 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 23491 23107 EWASRFWLW True PC9_epitope_Rep5 1279.61382772395 1279.6127299358602 93.868 2 0.2479108695251874 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 14821 16941 DYDSVFHHL True PC9_epitope_Rep1 1131.4985231881901 1131.49742993586 69.986 2 0.2479107752705649 0.00036105427849320016 0.9438714419765777 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 56556 11718 LDVQFSGLTK True NCI_RA007_Epitope_Rep1 1106.5971746003 1106.5960699358602 49.556 2 0.2479045244625707 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 101788 11858 SPIENIQRV True PC9_epitope_Rep3 1054.57710786206 1054.5760099358602 50.63 2 0.24790351358268742 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 14662 21683 DVNFEFPEFQL True H1975_Epitope_Rep3 1383.63468230783 1383.63358993586 90.622 2 0.2479007645691952 0.00036105427849320016 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 139234 9305 YTADGKEVLEY True H1975_Epitope_Rep3 1286.6030478263801 1286.6019499358601 40.786 2 0.247869689517581 0.00036105427849320016 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 41715 15132 IDMNDIKAFY True H1975_Epitope_Rep2 1228.579810284 1228.5787099358602 63.361 2 0.24786723245540948 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 113565 18893 TQYPFDFRGA True PC9_epitope_Rep5 1200.5563724174797 1200.55526993586 77.691 2 0.24786558262952527 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 47634 19442 IYPHGLVLL True PC9_epitope_Rep4 1023.61170246563 1023.61060993586 82.897 2 0.24783731483676888 0.00036105427849320016 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 94980 12848 RYQDAIRVF True PC9_epitope_Rep4 1166.6196413803798 1166.61854993586 57.286 2 0.24783309941407358 0.00036105427849320016 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 31618 8858 GEGNFGQVIRA True NCI_RA007_Epitope_Rep4 1146.57817049122 1146.5770699358602 40.894 2 0.2478221305179791 0.00036105427849320016 0.9438714419765777 ['ENSG00000066056|ENST00000372476|TIE1', 'ENST00000473014.1_1_1:43779426-43783109:+|nuORF'] 140497 19158 YYIFIPSKF True PC9_epitope_Rep6 1176.6219327961599 1176.62082993586 86.342 2 0.24782125075834277 0.00036105427849320016 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 25845 14135 FGFVTFDDHD True NCI_RA007_Epitope_Rep4 1198.4931034545798 1198.49200993586 61.649 2 0.2478136563979569 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 16781 12179 EFGPVVIDYGK True H1975_Epitope_Rep1 1222.6233893481397 1222.6222899358602 51.865 2 0.24780484143405798 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 2165 14627 AEMLYGLIHA True H1975_Epitope_Rep2 1116.56376629704 1116.5626699358602 61.422 2 0.2478038737966322 0.00036105427849320016 0.9438714419765777 ['ENST00000468255.5_1_6:31633906-31636470:+|nuORF', 'ENST00000481269.1_1_6:31633906-31636957:+|nuORF', 'ENSG00000204435|ENST00000375882|CSNK2B', 'chr6:31669172-31669328|499|10.62|0.0|20.02|+|ENST00000677536|CSNK2B,CSNK2B'] 104267 11343 SSDTADFRDLY True H1975_Epitope_Rep2 1288.55716026312 1288.55606993586 48.679 2 0.24779260638129585 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 87325 6029 QTALPGNDRY True H1975_Epitope_Rep3 1133.5465360097699 1133.54542993586 28.205 2 0.24778214913257882 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000155313|Q9UHP3|USP25', 'nc|ENSG00000155313|Q9UHP3-1|USP25', 'ENSG00000155313|ENST00000400183|USP25'] 75458 20080 NQIEDNDDFQL True PC9_epitope_Rep5 1349.57353860325 1349.57244993586 82.287 2 0.24777854526772405 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 4569 8191 ALAAAGYDVEK True PC9_epitope_Rep6 1106.56078909158 1106.5596899358602 41.071 2 0.24773762276152694 0.00036105427849320016 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6'] 71293 16308 MHAETAFESL True PC9_epitope_Rep5 1134.5015599633 1134.50046993586 67.725 2 0.24771338253968145 0.00036105427849320016 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 19971 10000 EMEAELEDER True PC9_epitope_Rep1 1249.5132468458098 1249.5121499358602 43.331 2 0.2477128257277545 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 52718 15722 KQLDDLKVEL True PC9_epitope_Rep3 1199.6761531969898 1199.6750499358602 65.632 2 0.24769273108443665 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 104809 6045 STDSETLRY True H1975_Epitope_Rep3 1070.48801807414 1070.4869299358602 28.266 2 0.24767590067989403 0.00036105427849320016 0.9438714419765777 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 12797 12940 DLINNLGTIAK True H1975_Epitope_Rep3 1170.66083748602 1170.6597499358602 55.004 2 0.24765426747369232 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 7106 5314 AQYEDIAQK True NCI_RA007_Epitope_Rep2 1064.5138388991597 1064.51274993586 25.292 2 0.24764689520839475 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 21698 7751 ERYKEVAEL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 35.188 2 0.24764202365443702 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 57673 9333 LEMLTGQERVA True H1975_Epitope_Rep2 1245.6387221424502 1245.63762993586 40.86 2 0.24763956006870433 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 61145 10108 LLDENLKDEY True H1975_Epitope_Rep2 1250.60304782638 1250.6019499358601 43.876 2 0.24763527020724777 0.00036105427849320016 0.9438714419765777 ['ENSG00000116984|ENST00000366577|MTR', 'nc|ENSG00000116984|Q99707-2|MTR'] 13922 20465 DRFEFPEQL True PC9_epitope_Rep5 1179.5560380643099 1179.5549499358601 83.755 2 0.24763476698272638 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 96332 6133 SEFEQNLSEK True H1975_Epitope_Rep3 1209.5513466066898 1209.5502499358602 28.603 2 0.2476162141535982 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 71559 6886 MLDHQPPQY True H1975_Epitope_Rep2 1127.50697969691 1127.50588993586 31.408 2 0.24758742300274175 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 33378 10438 GLESDVAELR True NCI_RA007_Epitope_Rep2 1087.5509526838698 1087.54984993586 45.193 2 0.24758356078927468 0.00036105427849320016 0.9438714419765777 ['ENSG00000176619|ENST00000325327|LMNB2'] 16015 10525 EEAENTLQSFR True PC9_epitope_Rep6 1322.61025846514 1322.60916993586 51.273 2 0.24757540040666773 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 4696 11973 ALDLEIATYR True H1975_Epitope_Rep1 1163.6186383208699 1163.61754993586 51.059 2 0.247566128487531 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 113975 15134 TRLEFQQQL True PC9_epitope_Rep3 1161.61422164677 1161.6131299358601 63.352 2 0.24756364982649148 0.00036105427849320016 0.9438714419765777 ['ENSG00000171159|ENST00000372994|BBLN'] 73014 14256 NDEELNKLLGK True PC9_epitope_Rep1 1271.6721304457099 1271.67049490379 59.66 3 0.24755873993344668 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 54388 10287 KYQKGFSLW True NCI_RA007_Epitope_Rep5 1155.6076797143498 1155.60658993586 46.198 2 0.2475342311533833 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 89734 7190 REYQELM[Oxidation]SV True H1975_Epitope_Rep2 1169.5386741284499 1169.5375699358601 32.591 2 0.24752282221876054 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 17354 6806 EHDTTEYKL True PC9_epitope_Rep1 1134.51931820242 1134.51822993586 30.985 2 0.24750695688092675 0.00036105427849320016 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 91624 10994 RPFEDQTSL True PC9_epitope_Rep2 1091.52473793603 1091.52364993586 47.609 2 0.2475019924120549 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 132443 11225 VYNSEYYHF True NCI_RA007_Epitope_Rep1 1220.5138388991602 1220.51274993586 47.66 2 0.24749125937275238 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 32835 11036 GIGTDEFTLNR True NCI_RA007_Epitope_Rep1 1221.5989655054498 1221.5978699358602 46.924 2 0.24748606052418873 0.00036105427849320016 0.9438714419765777 ['ENST00000505805.1_1_4:79518453-79531266:+|nuORF', 'ENSG00000138772|ENST00000264908|ANXA3'] 125158 21331 VLPVRYFYL True PC9_epitope_Rep5 1168.6644663144798 1168.6633699358601 87.106 2 0.2474747811616064 0.00036105427849320016 0.9438714419765777 ['ENSG00000178202|ENST00000323468|POGLUT3'] 52630 6843 KQEELEAALQR True NCI_RA007_Epitope_Rep2 1313.6939285194496 1313.6928299358601 31.235 2 0.24743656611255613 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 101797 9734 SPIENIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 47.855 2 0.24742231606619797 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 73517 14214 NFGIGQDIQPK True PC9_epitope_Rep1 1215.62478633047 1215.62368993586 59.497 2 0.24741387601319262 0.00036105427849320016 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 87696 4067 QVDQLTNDK True NCI_RA007_Epitope_Rep2 1059.51965255559 1059.5185499358602 20.458 2 0.247401720825761 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'VIM|p.R170L|2|0.27|ENSG00000026025|chr10:17229931-17229931|G/T|missense_variant'] 17552 16373 EHIQNIMTL True PC9_epitope_Rep4 1097.55392988933 1097.55282993586 70.941 2 0.2473932452194027 0.00036105427849320016 0.9438714419765777 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 11700 7404 DHFASVHSV True PC9_epitope_Rep3 997.46174375665 997.46064993586 33.487 2 0.24737888895300167 0.00036105427849320016 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 4568 9806 ALAAAGYDVEK True PC9_epitope_Rep5 1106.56078909158 1106.5596899358602 42.686 2 0.24737473763864193 0.00036105427849320016 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6'] 109608 21562 THDELIQLVL True PC9_epitope_Rep5 1179.6499384491499 1179.6488499358602 87.977 2 0.2473653415998515 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1', 'ENST00000522774.1_1_8:37720415-37728147:-|nuORF', 'nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1'] 63209 4737 LNVTEQEKIDK True H1975_Epitope_Rep3 1315.69834519355 1315.69669490379 23.346 3 0.24736214587350483 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 104803 16488 STDPWIQMAY True H1975_Epitope_Rep2 1210.53286009158 1210.5317699358602 68.639 2 0.24734531685225838 0.00036105427849320016 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B', 'nc|ENSG00000165097|Q8NB78-4|KDM1B'] 47594 20683 IYNGKLFDLL True PC9_epitope_Rep4 1194.6648602373 1194.66376993586 87.717 2 0.24734183672417792 0.00036105427849320016 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 45017 10415 IQLVEEELDR True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 45.013 2 0.24732279640280166 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 12318 8321 DITSDTSGDFR True NCI_RA007_Epitope_Rep2 1212.5258601348398 1212.5247699358601 37.007 2 0.247321744731752 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 54194 16869 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 69.747 2 0.2473158913657232 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 39363 8156 HLVDEPQNLIK True NCI_RA007_Epitope_Rep5 1304.7088503076 1304.7077499358602 38.054 2 0.24731070554106854 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 54154 18357 KYNDNFFGL True PC9_epitope_Rep6 1116.5240096600398 1116.52290993586 83.254 2 0.24730406213293674 0.00036105427849320016 0.9438714419765777 ['ENSG00000012963|ENST00000013070|UBR7'] 132149 9286 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 41.06 3 0.24729269980974816 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 99690 10443 SLGEISALTSK True NCI_RA007_Epitope_Rep1 1104.60265390356 1104.60154993586 44.604 2 0.24725965748533024 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 54303 16996 KYPSPFFVF True NCI_RA007_Epitope_Rep5 1130.5800679841798 1130.5789699358602 72.135 2 0.24724180602435775 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 28822 12999 FTDHELQEWY True H1975_Epitope_Rep1 1366.58298108814 1366.58188993586 55.082 2 0.2472350999504095 0.00036105427849320016 0.9438714419765777 ['ENSG00000115756|ENST00000307845|HPCAL1'] 74741 20813 NLLKLIAEV True PC9_epitope_Rep4 1011.6328318330299 1011.63172993586 88.207 2 0.24722960076920894 0.00036105427849320016 0.9438714419765777 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 107142 14826 SYMPTVSHL True PC9_epitope_Rep2 1033.49026700361 1033.4891699358602 62.291 2 0.2472281132918176 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 7872 6412 ATANQIILK True NCI_RA007_Epitope_Rep5 970.58113061334 970.58002993586 31.335 2 0.24722751741983992 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 138250 13071 YQTQLIQRV True PC9_epitope_Rep5 1147.6349570913499 1147.63386993586 55.285 2 0.247225709617623 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 14261 2634 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 14.782 2 0.2472111832155648 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 136627 10095 YIDEQFERY True H1975_Epitope_Rep2 1261.5615173675699 1261.5604299358602 43.825 2 0.24718789187186355 0.00036105427849320016 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 104261 8536 SSDSVGGFRY True H1975_Epitope_Rep2 1073.47778774361 1073.4766899358601 37.788 2 0.24717747051865965 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1'] 35472 10655 GTFATLSELH True NCI_RA007_Epitope_Rep3 1074.53457434374 1074.53346993586 48.96 2 0.2471753941196405 0.00036105427849320016 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 120519 22295 VFYPYPQYF True PC9_epitope_Rep3 1222.5698972232997 1222.5688099358601 91.043 2 0.24717157096601522 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 112486 6024 TNRPPLSLSR True PC9_epitope_Rep4 1139.64110510095 1139.63944490379 30.151 3 0.24716823461538126 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 46945 8515 IVLQIDNAR True H1975_Epitope_Rep1 1040.5978433066398 1040.59674993586 37.683 2 0.24715431448446257 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001', 'CON__Q6IFX2', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000427733.1_1_13:90882929-90883235:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 52189 18367 KMIEDLQNEL True PC9_epitope_Rep1 1231.61183868827 1231.6107499358602 75.44 2 0.24714178262926745 0.00036105427849320016 0.9438714419765777 ['ENSG00000198887|ENST00000361138|SMC5'] 42622 14925 IETIEVMEDR True PC9_epitope_Rep5 1233.59110324369 1233.59000993586 62.413 2 0.24712667600371757 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 69856 19236 LYANMFERL True PC9_epitope_Rep4 1155.57466533391 1155.5735699358602 82.091 2 0.24711909711736105 0.00036105427849320016 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 1064 19569 AEALPLPLLP True H1975_Epitope_Rep1 1032.6219327961599 1032.62082993586 81.477 2 0.2471136269101101 0.00036105427849320016 0.9438714419765777 ['ENST00000256190.12_1_11:10315695-10315752:-|nuORF'] 97854 5725 SHITPSTQQHL True PC9_epitope_Rep5 1247.62584895963 1247.62420490379 27.014 3 0.24707737626814857 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 24745 17839 FAYDGKDYL True PC9_epitope_Rep3 1090.4971262058598 1090.4960299358602 73.814 2 0.24707594823221482 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 8744 10648 AVDSLVPIGR True NCI_RA007_Epitope_Rep2 1025.58694426977 1025.58584993586 46.018 2 0.24707486828632821 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 1495 5982 AEENIEVARAA True H1975_Epitope_Rep3 1171.5833154413099 1171.5822099358602 28.021 2 0.24703990272233703 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 70115 14063 LYIVHPTMF True NCI_RA007_Epitope_Rep5 1119.57868808519 1119.57758993586 60.783 2 0.2470385413962581 0.00036105427849320016 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 29655 7591 FVM[Oxidation]EVEVDGQK True NCI_RA007_Epitope_Rep2 1295.60675368827 1295.6056499358601 34.15 2 0.247033376466391 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 86388 21172 QQLPMFIRI True PC9_epitope_Rep1 1144.64268532408 1144.64158993586 86.271 2 0.24701415405942992 0.00036105427849320016 0.9438714419765777 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-3|VPS13B', 'VPS13B|p.N469Ifs*2|1|0.13|ENSG00000132549|chr8:99135117-99135117|A/-|frameshift_variant', 'nc|ENSG00000132549|Q7Z7G8-4|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-5|VPS13B'] 47875 6917 IYTSSVNRL True NCI_RA007_Epitope_Rep3 1051.56620882519 1051.5651099358602 34.31 2 0.24701081596367785 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 37244 6744 GVVEVTHDLQK True NCI_RA007_Epitope_Rep2 1223.6510010783097 1223.64934490379 30.846 3 0.24700490803138647 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 43360 19096 IHLIDPNTL True PC9_epitope_Rep5 1034.5760452329 1034.57494993586 78.482 2 0.24699939078136116 0.00036105427849320016 0.9438714419765777 ['ENSG00000169251|ENST00000351193|NMD3', 'NMD3|p.E344Kfs*10|1|0.18|ENSG00000169251|chr3:161246345-161246345|G/-|frameshift_variant', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 28660 14060 FSSPHLVQV True PC9_epitope_Rep4 1012.5341804209198 1012.53308993586 61.991 2 0.24698945725932098 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 138768 10368 YSDDGQKWTVY True H1975_Epitope_Rep3 1360.5935457718401 1360.59244993586 44.935 2 0.24697762353123281 0.00036105427849320016 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2'] 101712 5946 SPGLQKEAV True PC9_epitope_Rep5 927.5025459394699 927.50144993586 27.866 2 0.24696749444467306 0.00036105427849320016 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 17723 15336 EHSLVIDTL True PC9_epitope_Rep6 1025.53932537101 1025.53822993586 71.118 2 0.24694754775155606 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 132958 16647 VYTYIQSRF True PC9_epitope_Rep3 1175.5975089534697 1175.59640993586 69.169 2 0.2469469195818532 0.00036105427849320016 0.9438714419765777 ['DYRK4|p.R355Kfs*16|1|0.21|ENSG00000010219|chr12:4610195-4610196|-/A|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 9735 20598 AYKYIQELW True PC9_epitope_Rep1 1212.6179100448796 1212.6168099358601 84.046 2 0.24694491079855002 0.00036105427849320016 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 94443 20295 RYFLPPYTF True PC9_epitope_Rep4 1202.6124307416196 1202.61132993586 86.207 2 0.2469365924121576 0.00036105427849320016 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 41254 7253 IAEVDASVVR True H1975_Epitope_Rep1 1057.5767735088898 1057.57566993586 32.908 2 0.24691341860597332 0.00036105427849320016 0.9438714419765777 ['ENST00000415995.5_1_3:48636563-48647036:-|nuORF', 'ENSG00000010256|ENST00000203407|UQCRC1', 'ENST00000480561.5_1_3:48636882-48638270:-|nuORF', 'ENST00000471189.5_1_3:48636563-48638429:-|nuORF'] 133303 12365 WEQDGGRWLP True H1975_Epitope_Rep2 1242.5781704912197 1242.5770699358602 52.647 2 0.24690719082784288 0.00036105427849320016 0.9438714419765777 ['ENSG00000166592|ENST00000299759|RRAD'] 73559 6207 NFSDNQLQEGK True NCI_RA007_Epitope_Rep2 1278.5840437173 1278.5829499358601 28.751 2 0.24688821721659612 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 67190 11486 LTDIFQHDTY True H1975_Epitope_Rep1 1251.57716743171 1251.57606993586 49.164 2 0.2468823918833825 0.00036105427849320016 0.9438714419765777 ['ENSG00000164366|ENST00000296824|CCDC127'] 137048 19567 YKVEYPIMY True PC9_epitope_Rep3 1204.58383303528 1204.58272993586 80.5 2 0.2468733497465647 0.00036105427849320016 0.9438714419765777 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 71975 15129 MPWGDPNYRSA True PC9_epitope_Rep5 1292.5608061749201 1292.5597099358602 63.199 2 0.2468622016590994 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 135600 12204 YEELQSLAGK True PC9_epitope_Rep5 1136.5713537752797 1136.5702499358601 51.928 2 0.24685612908257087 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 114843 11835 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.4974899358601 50.67 2 0.24682688990961182 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 72803 19558 NAIDRLVNI True PC9_epitope_Rep3 1026.5821932425 1026.58108993586 80.464 2 0.24681911659536854 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 135258 19317 YAYDGKDYLAL True PC9_epitope_Rep5 1290.6132185872598 1290.6121299358601 79.347 2 0.24680550837255139 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 53459 15421 KVIEGLDTGL True PC9_epitope_Rep2 1043.5862755634298 1043.5851699358602 64.596 2 0.246797857780586 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 138777 11130 YSDDNPYYNY True H1975_Epitope_Rep2 1312.48841199696 1312.4873099358601 47.848 2 0.24679292929983218 0.00036105427849320016 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 35650 5966 GTMKAQGVLLK True NCI_RA007_Epitope_Rep4 1144.6638146914797 1144.6627099358602 29.567 2 0.24676020353953157 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166482|P55083-2|MFAP4'] 10007 15444 AYTLLLHTW True NCI_RA007_Epitope_Rep1 1116.59678067748 1116.59568993586 64.155 2 0.24675645055494919 0.00036105427849320016 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 10068 11773 AYVHMVTHF True PC9_epitope_Rep4 1103.52223583823 1103.52112993586 53.051 2 0.24674890628862778 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 136575 9054 YHTDTTVKF True PC9_epitope_Rep5 1110.53457434374 1110.53346993586 39.77 2 0.2467224221927549 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 117453 11724 VADTVARVL True PC9_epitope_Rep2 942.5498304850598 942.54872993586 50.43 2 0.24666016123785292 0.00036105427849320016 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 53994 10393 KYLDNPNAL True PC9_epitope_Rep4 1046.53965972418 1046.53856993586 47.678 2 0.24665372396765115 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 95026 7997 RYQTQPVTL True NCI_RA007_Epitope_Rep1 1104.5927579261997 1104.5916699358602 35.1 2 0.2466356326830892 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 120518 22105 VFYPYPQYF True PC9_epitope_Rep2 1222.5698972232997 1222.56937496793 90.5 1 0.2466035804463103 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 61175 14512 LLDLDEELRY True H1975_Epitope_Rep3 1277.6503323719699 1277.6492299358601 61.182 2 0.24659575423868346 0.00036105427849320016 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'nc|ENSG00000119650|Q96FT9-3|IFT43', 'ENST00000554026.5_1_14:76452129-76542971:+|nuORF', 'nc|ENSG00000119650|Q96FT9-4|IFT43'] 94852 12849 RYMPQNPHII True PC9_epitope_Rep3 1267.6495616096697 1267.64791490379 54.443 3 0.24658083377319798 0.00036105427849320016 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 132080 10850 VYIKHPVSL True PC9_epitope_Rep1 1054.61751612206 1054.61640993586 46.621 2 0.24658058604960345 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 53956 13765 KYITQGQLLQF True NCI_RA007_Epitope_Rep1 1337.73433677945 1337.7332299358602 57.56 2 0.24656226055149977 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 133050 10349 VYVVGTAHF True NCI_RA007_Epitope_Rep4 991.5127167003499 991.5121649679301 46.663 1 0.2465579754550278 0.00036105427849320016 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 138886 7603 YSDSLVQKGY True H1975_Epitope_Rep2 1158.5557037111398 1158.55460993586 34.197 2 0.24655275696056667 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 54363 11478 KYQEYTNEL True PC9_epitope_Rep1 1186.5506183307 1186.5495299358602 49.029 2 0.24653739053720178 0.00036105427849320016 0.9438714419765777 ['ENSG00000183735|ENST00000331710|TBK1', 'ENST00000545392.1_1_12:64890804-64891535:+|nuORF'] 21124 18598 ERDPVLWSL True PC9_epitope_Rep6 1113.58185888933 1113.5807699358602 84.181 2 0.24653391324780602 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 116567 13969 TYGEIFEKF True NCI_RA007_Epitope_Rep1 1132.54407639828 1132.5429699358601 58.361 2 0.2465273368993149 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 112994 9789 TPSQIGVILR True H1975_Epitope_Rep1 1082.64479349906 1082.64368993586 42.581 2 0.24652515040591894 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF'] 15238 5064 EAGEQGDIEPR True PC9_epitope_Rep1 1199.5418445521498 1199.54074993586 24.334 2 0.24650872365882037 0.00036105427849320016 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 65386 9000 LSERADWQY True H1975_Epitope_Rep2 1166.5356369729 1166.53452993586 39.569 2 0.2464957867360317 0.00036105427849320016 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 71558 6786 MLDHQPPQY True H1975_Epitope_Rep2 1127.50697969691 1127.50588993586 31.018 2 0.24649052899873 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 109712 21945 THFNFAIVF True PC9_epitope_Rep1 1094.5549158654999 1094.55380993586 89.229 2 0.24647794444235901 0.00036105427849320016 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18'] 54286 11295 KYPNVFKKI True PC9_epitope_Rep5 1135.67536535135 1135.67371490379 48.439 3 0.24645177113221656 0.00036105427849320016 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 38070 7164 HEMFPAVHAA True H1975_Epitope_Rep3 1108.5123994305197 1108.51130993586 32.531 2 0.24644999265471915 0.00036105427849320016 0.9438714419765777 ['ENSG00000113638|ENST00000337702|TTC33'] 119719 7745 VETFSGVYK True NCI_RA007_Epitope_Rep5 1028.5178616504397 1028.51676993586 36.489 2 0.24640989180987455 0.00036105427849320016 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF'] 136542 14489 YHSEVPVSL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 60.557 2 0.24638707754765263 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 104817 6944 STDVSQPPHVY True H1975_Epitope_Rep2 1228.5724164044402 1228.5713099358602 31.63 2 0.246371872466314 0.00036105427849320016 0.9438714419765777 ['KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion', 'ENSG00000086200|ENST00000325324|IPO11', 'nc|ENSG00000086200|Q9UI26-2|IPO11', 'ENST00000502862.1_1_5:61811283-61822085:+|nuORF'] 57420 8344 LEIIGNSKNVA True H1975_Epitope_Rep2 1156.64518742188 1156.6440899358602 37.047 2 0.24637157702563048 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 87369 12637 QTDIQGALSAY True H1975_Epitope_Rep3 1165.5615173675699 1165.5604299358602 53.813 2 0.24636173741875336 0.00036105427849320016 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 88353 19950 QYMERLQLL True PC9_epitope_Rep1 1192.62742918276 1192.6263299358602 81.56 2 0.24635579231443003 0.00036105427849320016 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 140686 5144 YYPTEDVPRK True NCI_RA007_Epitope_Rep5 1266.6244519772997 1266.6228149037902 26.482 3 0.2463557806236725 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 94889 7682 RYPDNLKHL True PC9_epitope_Rep1 1154.61964138038 1154.61799490379 34.372 3 0.2463509696654632 0.00036105427849320016 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 77047 6654 NVYEVVNPK True NCI_RA007_Epitope_Rep3 1060.5553097883198 1060.5542099358602 33.244 2 0.2463456848394791 0.00036105427849320016 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 89188 12414 REIEELLAEA True H1975_Epitope_Rep3 1171.6084675599898 1171.60736993586 52.94 2 0.2463091463796934 0.00036105427849320016 0.9438714419765777 ['ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF', 'nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10'] 27035 21832 FLMDFIHQV True PC9_epitope_Rep5 1148.56885167748 1148.56774993586 89.008 2 0.2463049363491082 0.00036105427849320016 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 89253 6594 RELAQQVQQVA True NCI_RA007_Epitope_Rep3 1268.68369818892 1268.68260993586 32.996 2 0.24628932879264384 0.00036105427849320016 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 48358 5116 KEAESSPFVER True NCI_RA007_Epitope_Rep1 1277.62518025329 1277.62354490379 23.984 3 0.2462871827243744 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 108531 5204 TEFTPTEKDE True H1975_Epitope_Rep3 1195.52446315251 1195.52336993586 25.107 2 0.24628353896924124 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 45484 10759 ISEQFTAM[Oxidation]FR True NCI_RA007_Epitope_Rep1 1244.58595867404 1244.58486993586 45.843 2 0.2462828422861515 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 129249 6770 VTDPEKLNNY True H1975_Epitope_Rep2 1191.57716743171 1191.57606993586 30.956 2 0.2462714810625372 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000104885|ENST00000398665|DOT1L'] 1351 5580 AEEEAATRIPA True H1975_Epitope_Rep2 1156.57241640444 1156.5713099358602 26.467 2 0.24626820375363095 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 70049 16344 LYGRNFNYL True PC9_epitope_Rep4 1158.5821932425 1158.58108993586 70.832 2 0.2462675506504895 0.00036105427849320016 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 101102 20776 SLVDEFKEL True PC9_epitope_Rep2 1078.55464108198 1078.55354993586 85.357 2 0.246262077047081 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 11583 15663 DGTGVVEFVR True PC9_epitope_Rep5 1077.5454733806098 1077.54436993586 65.259 2 0.2462589838697938 0.00036105427849320016 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 74786 10975 NLNLEPFSEK True H1975_Epitope_Rep1 1189.5979028762897 1189.5968099358602 47.18 2 0.24624591385586866 0.00036105427849320016 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2'] 131251 9684 VVQDGITLITK True NCI_RA007_Epitope_Rep3 1185.69688864157 1185.6957899358601 45.169 2 0.24624513773282242 0.00036105427849320016 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 26661 20272 FLASESLIKQI True PC9_epitope_Rep1 1247.71253870571 1247.7114499358602 82.803 2 0.24624370946780746 0.00036105427849320016 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 101786 11587 SPIENIQRV True PC9_epitope_Rep3 1054.57710786206 1054.5760099358602 49.584 2 0.24622620916421767 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 38127 11040 HEQFIPIAA True H1975_Epitope_Rep2 1024.5341804209197 1024.53308993586 47.495 2 0.24622049010747232 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 106907 12548 SYIQRLVQI True NCI_RA007_Epitope_Rep3 1118.64479349906 1118.64368993586 56.594 2 0.2462178010899089 0.00036105427849320016 0.9438714419765777 ['ENSG00000101347|ENST00000646673|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1'] 104739 8064 STDKFKTDFY True H1975_Epitope_Rep2 1250.58191845898 1250.58082993586 35.967 2 0.24621514592419655 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 47600 15139 IYNQVKQII True PC9_epitope_Rep1 1117.64954452633 1117.64844993586 63.054 2 0.24620574176050924 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 45575 14011 ISGLIYEETR True PC9_epitope_Rep5 1179.6135529404298 1179.61244993586 58.911 2 0.24619684137962225 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 43940 5904 ILEQEEYQR True H1975_Epitope_Rep3 1206.5880664685799 1206.58696993586 27.72 2 0.24618180979801052 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 69624 12309 LVTYVPVTTFK True NCI_RA007_Epitope_Rep4 1266.72237511342 1266.7212699358602 54.341 2 0.24617454355926033 0.00036105427849320016 0.9438714419765777 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 69964 18921 LYEKDIQLF True PC9_epitope_Rep4 1167.6175756917098 1167.61646993586 80.866 2 0.24614910767526166 0.00036105427849320016 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 14871 22641 DYFFKPVLF True PC9_epitope_Rep2 1174.60628273202 1174.6051899358602 92.583 2 0.24614697556058263 0.00036105427849320016 0.9438714419765777 ['ENST00000369452.8_1_10:112723943-112724024:+|nuORF'] 107145 15457 SYMPTVSHL True PC9_epitope_Rep5 1033.49026700361 1033.4891699358602 64.466 2 0.2461266364941898 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 53896 13495 KYIENLDNITF True NCI_RA007_Epitope_Rep3 1368.6925315371197 1368.69142993586 60.374 2 0.24612036782537966 0.00036105427849320016 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 23386 4305 EVVEEAENGR True NCI_RA007_Epitope_Rep2 1130.5203808315798 1130.5192899358601 21.385 2 0.24609292447083406 0.00036105427849320016 0.9438714419765777 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 32962 12555 GISQEQMQEFR True PC9_epitope_Rep1 1351.6190493270299 1351.61794993586 53.162 2 0.2460788856681145 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 11825 18460 DHMRFISEL True PC9_epitope_Rep1 1146.54917886206 1146.5480899358602 75.797 2 0.24607195859222383 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 77049 6812 NVYEVVNPK True NCI_RA007_Epitope_Rep5 1060.5553097883198 1060.5542099358602 32.887 2 0.24605673098867778 0.00036105427849320016 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 59062 8361 LGDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep1 1269.55471811541 1269.55362993586 36.523 2 0.2460294953779739 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 108724 5724 TEMNGRIVAT True H1975_Epitope_Rep3 1090.5440934816197 1090.54298993586 27.046 2 0.24602260550401106 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 21548 14496 ERSDLEYQL True PC9_epitope_Rep1 1151.54586730343 1151.5447699358601 60.583 2 0.24602033788454208 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 9591 20262 AYDTVRWEF True PC9_epitope_Rep5 1185.5454733806098 1185.54436993586 82.987 2 0.24601674431491882 0.00036105427849320016 0.9438714419765777 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 53208 13083 KTDDLTMVLY True H1975_Epitope_Rep1 1197.59512599497 1197.5940299358601 55.413 2 0.24600860850818587 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 130382 9133 VTVGVDGTLYK True NCI_RA007_Epitope_Rep5 1150.62338934814 1150.6222899358602 41.78 2 0.24600667627881714 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1', 'ENST00000447818.2_1_X:79827372-79827747:-|nuORF', 'ENSG00000159399|ENST00000290573|HK2'] 45565 13956 ISGLIYEETR True PC9_epitope_Rep1 1179.6135529404298 1179.61244993586 58.518 2 0.24598521162992731 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 118303 8635 VDDFLANEAK True H1975_Epitope_Rep3 1120.540053647 1120.53894993586 38.21 2 0.24598405404367427 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142657|P52209-2|PGD', 'ENSG00000142657|ENST00000270776|PGD'] 94398 12227 RYFDPANGKF True PC9_epitope_Rep2 1213.5880068989297 1213.5869099358601 52.343 2 0.24598360952287923 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 105055 19995 STIRLLTSL True PC9_epitope_Rep3 1002.60734536118 1002.60624993586 82.156 2 0.24598227706346565 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 102789 12690 SQESKVLYL True PC9_epitope_Rep4 1065.57062549929 1065.5695299358601 56.665 2 0.2459675577527692 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 83601 5061 QDVDNASLAR True NCI_RA007_Epitope_Rep1 1087.52580056519 1087.52470993586 23.771 2 0.24596173325819082 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 42086 16052 IEEIKDFLLTA True H1975_Epitope_Rep2 1290.7071189721 1290.7060299358602 66.946 2 0.24595709507431696 0.00036105427849320016 0.9438714419765777 ['ENSG00000172809|ENST00000311111|RPL38', 'ENST00000529123.2_1_17:72199871-72200367:+|nuORF', 'ENST00000530646.1_1_17:72199871-72200367:+|nuORF'] 57659 13377 LEMDLKDLEA True NCI_RA007_Epitope_Rep4 1175.57439055039 1175.5732899358602 58.622 2 0.2459485734539892 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 54079 12994 KYLYVDKNF True PC9_epitope_Rep5 1188.6179100448796 1188.61627490379 54.991 3 0.2459417895874487 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 88264 20605 QYFDSRGMFI True PC9_epitope_Rep5 1262.5753936098997 1262.5742899358602 84.306 2 0.24593493987356677 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18', 'ENST00000497508.1_1_2:669582-669891:-|nuORF'] 53392 10665 KVDSLLENLEK True NCI_RA007_Epitope_Rep2 1286.7081816012599 1286.70708993586 46.083 2 0.24593315382301287 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 53444 14385 KVIDEIYRV True PC9_epitope_Rep5 1133.64445914589 1133.64280490379 60.332 3 0.24592764124623243 0.00036105427849320016 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 87692 13221 QVDPLSALKY True H1975_Epitope_Rep2 1132.6128246644398 1132.61172993586 55.983 2 0.24590319814882833 0.00036105427849320016 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 139662 9380 YTSYPM[Oxidation]HDFY True H1975_Epitope_Rep3 1338.5226897111402 1338.5215899358602 41.08 2 0.24589853267789583 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 57694 7881 LENDQIESLR True H1975_Epitope_Rep3 1215.60953018915 1215.6084299358602 35.292 2 0.24589114826212502 0.00036105427849320016 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF'] 132328 21950 VYLPPEAFTF True PC9_epitope_Rep4 1182.5961119711399 1182.5950099358602 92.64 2 0.2458786343994134 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 116722 14735 TYKVISNEF True PC9_epitope_Rep5 1099.5549754351498 1099.5538699358601 61.677 2 0.24587796794244196 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 9788 19691 AYLESFYKF True PC9_epitope_Rep4 1166.5648118428599 1166.56370993586 83.862 2 0.24585149399180514 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 54414 7939 KYSLIKGNF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 37.226 2 0.2458334986753785 0.00036105427849320016 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 67038 18423 LTAPEDVFSKL True PC9_epitope_Rep6 1218.6496040959798 1218.6485099358601 83.509 2 0.24583242321388002 0.00036105427849320016 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 138243 22021 YQTPRLWLF True PC9_epitope_Rep3 1222.6498788795 1222.6487899358601 90.003 2 0.24583068493437446 0.00036105427849320016 0.9438714419765777 ['ENST00000467275.1_1_3:112256557-112257010:-|nuORF', 'nc|ENSG00000144848|Q9NT62-2|ATG3', 'ENSG00000144848|ENST00000283290|ATG3', 'ENST00000495756.5_1_3:112255248-112280627:-|nuORF'] 70935 16275 MELQEIQLK True PC9_epitope_Rep1 1130.6005457285798 1130.59944993586 67.422 2 0.24580724332386575 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 97070 10924 SEYLRYEDTL True H1975_Epitope_Rep2 1287.59829679911 1287.5971899358601 47.051 2 0.2458061830858751 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 119087 4836 VEHSDLSFSK True NCI_RA007_Epitope_Rep5 1147.5509526838698 1147.54984993586 25.293 2 0.24579879243736694 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 26676 11302 FLDASGAKLDY True H1975_Epitope_Rep1 1198.5870038394198 1198.5859099358602 48.45 2 0.24579171253489224 0.00036105427849320016 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 96624 4836 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 23.691 2 0.2457907027234055 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 132871 9123 VYTSGVYHI True NCI_RA007_Epitope_Rep4 1037.51819600361 1037.5170899358602 41.932 2 0.24577549213325725 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 89203 16516 REIFLSQPILL True H1975_Epitope_Rep2 1327.7863723523099 1327.78526993586 68.749 2 0.24576586491505187 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 43122 10429 IGNLNTLVVK True NCI_RA007_Epitope_Rep2 1069.64954452633 1069.64844993586 45.159 2 0.24574718057068526 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 37131 15108 GVTDLYYILK True NCI_RA007_Epitope_Rep4 1183.64887581999 1183.6477699358602 65.678 2 0.24572704858431574 0.00036105427849320016 0.9438714419765777 ['ENST00000508918.5_1_4:16504706-16675844:-|nuORF', 'nc|ENSG00000169744|O43679-2|LDB2', 'nc|ENSG00000169744|O43679-3|LDB2', 'ENSG00000169744|ENST00000304523|LDB2'] 1301 7260 AEDVLSGKVSA True H1975_Epitope_Rep3 1074.55570371114 1074.55460993586 32.898 2 0.24572463588583 0.00036105427849320016 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 140732 13846 YYQHIVTTL True PC9_epitope_Rep4 1136.5866099166 1136.58550993586 61.159 2 0.2456203702827256 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 47583 10622 IYNGDMEKI True PC9_epitope_Rep4 1081.51139637101 1081.51028993586 48.607 2 0.2456039285232756 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 29695 12113 FVNVVPTFGK True H1975_Epitope_Rep1 1106.6124307416198 1106.61132993586 51.606 2 0.24560331154882076 0.00036105427849320016 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 18469 13712 EKLEATINELV True NCI_RA007_Epitope_Rep1 1257.68163250025 1257.68052993586 57.352 2 0.24559222416456591 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 14320 10505 DTDHYFLRY True H1975_Epitope_Rep2 1228.5512870370399 1228.5496349037899 45.425 3 0.24558515158503236 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 109856 14600 THMELYSQL True PC9_epitope_Rep4 1120.52229540788 1120.52118993586 64.087 2 0.2455794956683191 0.00036105427849320016 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 16485 8421 EELYQNLTR True H1975_Epitope_Rep1 1164.57750178488 1164.57640993586 37.319 2 0.24557499841646147 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 104263 8652 SSDSVGGFRY True H1975_Epitope_Rep3 1073.47778774361 1073.4766899358601 38.276 2 0.24555425644080528 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1'] 120105 13174 VFIDKQTNL True PC9_epitope_Rep3 1076.5866099166 1076.58550993586 55.705 2 0.24555291599759416 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 39382 12922 HLVGIDIFTGK True NCI_RA007_Epitope_Rep2 1198.6710082469 1198.66990993586 54.885 2 0.2455489716914766 0.00036105427849320016 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 84567 14363 QHDFQAPYL True PC9_epitope_Rep6 1117.5192586327698 1117.5181699358602 67.143 2 0.24554656451254814 0.00036105427849320016 0.9438714419765777 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 73843 5159 NHEEEISTLR True NCI_RA007_Epitope_Rep2 1226.58912909774 1226.58802993586 24.686 2 0.24552933586390716 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 1477 13228 [Acetylation]-AEELVLER True H1975_Epitope_Rep3 999.5236756231699 999.52256993586 56.137 2 0.2455288587021619 0.00036105427849320016 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 23983 18984 EYPDRIMNTF True PC9_epitope_Rep5 1284.5808729131597 1284.5797699358602 78.048 2 0.2455286007863369 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 67172 11211 LTDFIREEY True H1975_Epitope_Rep3 1184.57135377528 1184.5702499358601 48.222 2 0.2455126867308445 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 137561 11331 YLSERYAELY True H1975_Epitope_Rep2 1305.62411762413 1305.6230299358601 48.633 2 0.24550766240938832 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 76552 10993 NTDPWAGYRY True H1975_Epitope_Rep2 1241.5465360097699 1241.54542993586 47.311 2 0.24550681458644696 0.00036105427849320016 0.9438714419765777 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 73008 9201 NDEELNKLLGK True NCI_RA007_Epitope_Rep3 1271.6721304457099 1271.6710299358601 43.286 2 0.2454920446971304 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 21307 15050 ERISLQQEL True PC9_epitope_Rep3 1114.59823722946 1114.5971499358602 63.02 2 0.24546895539003652 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 86623 7061 QREAEQSNVAL True PC9_epitope_Rep1 1243.61567819875 1243.61458993586 31.967 2 0.24543355001271527 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 70717 11077 M[Oxidation]DVAASEFFR True H1975_Epitope_Rep3 1187.5281094447498 1187.5270099358602 47.701 2 0.24542963973106505 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 108084 11591 TDLLLEPYNK True NCI_RA007_Epitope_Rep1 1204.6339540318397 1204.6328499358601 49.057 2 0.24542667424004092 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 83025 9617 PYKVTQDEL True PC9_epitope_Rep4 1091.54989005471 1091.5487899358602 44.617 2 0.24542388820516614 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 54059 21157 KYLTEGLLQF True PC9_epitope_Rep3 1210.65977485686 1210.6586699358602 86.666 2 0.24541687537375015 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 65808 6204 LSKDPNIVIAK True NCI_RA007_Epitope_Rep1 1196.71287305888 1196.71123490379 28.167 3 0.2454118387035481 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 83169 11985 PYTKVEESF True PC9_epitope_Rep1 1098.5233409536997 1098.5222499358601 50.963 2 0.24539485846173212 0.00036105427849320016 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 21394 12652 ERMPEQIRL True PC9_epitope_Rep3 1170.61792712822 1170.61627490379 53.69 3 0.24536970389361287 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 67114 11082 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.5811499358601 47.591 2 0.2453268329932982 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 140569 19262 YYLQGGFNKF True PC9_epitope_Rep5 1235.5975089534697 1235.59640993586 79.132 2 0.24530862181133384 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164086|Q16829-2|DUSP7', 'ENSG00000164086|ENST00000495880|DUSP7'] 140276 12551 YYAEVETRI True PC9_epitope_Rep4 1142.5607890915799 1142.5596899358602 56.099 2 0.245287700481257 0.00036105427849320016 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 132457 14771 VYNSEYYHF True PC9_epitope_Rep4 1220.5138388991602 1220.51274993586 64.749 2 0.24528080894538234 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 135779 5895 YENEVALRQ True NCI_RA007_Epitope_Rep5 1120.5512870370399 1120.55018993586 29.362 2 0.2452677271064549 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 135221 9647 YAYDGKDYL True NCI_RA007_Epitope_Rep5 1106.4920408254197 1106.49094993586 43.745 2 0.24526485875978804 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 45563 9356 ISGLIYEETR True NCI_RA007_Epitope_Rep5 1179.6135529404298 1179.61244993586 42.63 2 0.24525613501150179 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 139460 10884 YTFGTKEPLY True H1975_Epitope_Rep3 1217.5968402471299 1217.59574993586 46.948 2 0.24525149996111195 0.00036105427849320016 0.9438714419765777 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 54426 20526 KYSPFVVSF True PC9_epitope_Rep5 1072.5593325396 1072.55822993586 83.995 2 0.24524195336819019 0.00036105427849320016 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 70442 20625 LYRLQFNEF True PC9_epitope_Rep1 1228.6240580544797 1228.62296993586 84.153 2 0.2452281157238148 0.00036105427849320016 0.9438714419765777 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 130792 14898 VVEQLKDWLY True H1975_Epitope_Rep2 1291.68123857743 1291.68014993586 62.459 2 0.24522090779501754 0.00036105427849320016 0.9438714419765777 ['ENSG00000164109|ENST00000296509|MAD2L1'] 129046 6120 VTAKELSLVNK True NCI_RA007_Epitope_Rep3 1200.70778767844 1200.7061549037899 31.062 3 0.2452184746565428 0.00036105427849320016 0.9438714419765777 ['ENSG00000050405|ENST00000341247|LIMA1', 'nc|ENSG00000050405|Q9UHB6-4|LIMA1'] 139323 7257 YTDQFSRNY True H1975_Epitope_Rep3 1192.51490152832 1192.51380993586 32.887 2 0.24521265194308514 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 132138 6841 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5287299358602 32.999 2 0.24518696522331757 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 88410 19078 QYQKVPVLF True PC9_epitope_Rep5 1120.6280808057597 1120.6269899358601 78.413 2 0.24517790048478647 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 129074 6722 VTAQVVGTERY True H1975_Epitope_Rep1 1221.6353510141698 1221.63424993586 30.899 2 0.24517423106534536 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000574268.1_1_17:4710512-4711565:+|nuORF', 'PLD2|p.T76Qfs*77|1|0.12|ENSG00000129219|chr17:4808096-4808097|AT/-|frameshift_variant'] 106094 9206 SVMSTVEWNK True NCI_RA007_Epitope_Rep3 1179.5594091925898 1179.55830993586 43.306 2 0.2451727108556715 0.00036105427849320016 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 135701 11629 YEILTPNSIPK True NCI_RA007_Epitope_Rep2 1273.69180326113 1273.69070993586 49.826 2 0.24516980138285624 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 129971 7524 VTNWDDMEK True NCI_RA007_Epitope_Rep3 1136.4808245187198 1136.4797299358602 36.718 2 0.2451646565128136 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 129135 8781 VTDAVALRV True H1975_Epitope_Rep2 942.5498304850599 942.54872993586 38.741 2 0.2451281587600489 0.00036105427849320016 0.9438714419765777 ['ENST00000442885.2_1_11:65655295-65655958:-|nuORF', 'ENST00000528937.1_1_11:65654989-65655958:-|nuORF', 'ENST00000532679.5_1_11:65653270-65655931:-|nuORF', 'ENSG00000172500|ENST00000357519|FIBP', 'nc|ENSG00000172500|O43427|FIBP'] 139123 12010 YSQDYQQFY True H1975_Epitope_Rep1 1240.5036681382799 1240.50256993586 51.204 2 0.24512753936060339 0.00036105427849320016 0.9438714419765777 ['ENSG00000003756|ENST00000347869|RBM5', 'ENST00000441812.6_1_3:50144918-50150831:+|nuORF', 'ENST00000494360.5_1_3:50144211-50147205:+|nuORF', 'ENST00000489437.1_1_3:50144918-50148299:+|nuORF'] 41087 12343 HYLPDLHHL True PC9_epitope_Rep2 1143.5825275956702 1143.5808749037901 52.788 3 0.24510559519605438 0.00036105427849320016 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 67169 11228 LTDFIREEY True H1975_Epitope_Rep1 1184.57135377528 1184.5702499358601 48.162 2 0.2451015146608932 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 134770 11413 WYDNEFGYSNR True NCI_RA007_Epitope_Rep1 1449.5949427541698 1449.5938499358601 48.359 2 0.245075241161853 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF'] 98037 10590 [Acetylation]-SHTILLVQPTK True NCI_RA007_Epitope_Rep2 1277.7343370957499 1277.7332299358602 45.792 2 0.24507283004799205 0.00036105427849320016 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 88404 21651 QYPVYWDHLEF True PC9_epitope_Rep5 1495.67721582615 1495.67610993586 88.325 2 0.2450624505042532 0.00036105427849320016 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21'] 24157 18184 EYTDVLQKI True PC9_epitope_Rep2 1107.58119018299 1107.58008993586 75.253 2 0.24505180188172906 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 113246 17576 TQEDVRLIGL True PC9_epitope_Rep4 1142.62953735774 1142.62844993586 75.623 2 0.24504294571364477 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 109937 7702 THSDIQVKL True PC9_epitope_Rep2 1039.56620882519 1039.5651099358602 35.0 2 0.24503757905788986 0.00036105427849320016 0.9438714419765777 ['ENSG00000105223|ENST00000409735|PLD3', 'EGLN2-PLD3|1|fusion'] 73022 14144 NDEELNKLLGK True PC9_epitope_Rep5 1271.6721304457099 1271.67049490379 59.416 3 0.24502999304918438 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 117255 19385 TYYRGFLTL True PC9_epitope_Rep4 1132.59169529704 1132.5905899358602 82.675 2 0.24502412196407192 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'ENST00000554761.5_1_14:90397883-90418750:-|nuORF', 'ENST00000553871.5_1_14:90263589-90418750:-|nuORF', 'nc|ENSG00000140025|Q9BUY7-6|EFCAB11', 'ENST00000556639.5_1_14:90302986-90416480:-|nuORF'] 116696 12488 TYITSVSRL True PC9_epitope_Rep6 1038.57095985246 1038.5698699358602 59.454 2 0.24502065125274608 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 29297 15399 FVDPLVTNY True H1975_Epitope_Rep2 1066.53351171458 1066.5324099358602 64.391 2 0.24501758670499174 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 70167 21860 LYLGLFNRL True PC9_epitope_Rep1 1107.6440652230701 1107.64296993586 88.896 2 0.2450032915378357 0.00036105427849320016 0.9438714419765777 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 118522 10477 VDTFLEDVK True H1975_Epitope_Rep1 1064.5389910178399 1064.5378899358602 45.255 2 0.24500102499564852 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 26000 20723 FHDDWISSI True PC9_epitope_Rep1 1118.5032742154601 1118.5021699358601 84.536 2 0.24500100263614688 0.00036105427849320016 0.9438714419765777 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 4685 9466 ALDGRETDFY True H1975_Epitope_Rep1 1185.5302172392899 1185.52912993586 41.328 2 0.24499402023852382 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 113042 6152 TPVEPEVAIHR True NCI_RA007_Epitope_Rep5 1246.6669854956199 1246.6653449037901 30.343 3 0.24497546542237972 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000008988|P60866-2|RPS20', 'ENST00000521289.5_1_8:56986544-56986942:-|nuORF', 'ENSG00000008988|ENST00000009589|RPS20'] 131913 15638 VYENVSHFL True PC9_epitope_Rep6 1106.53965972418 1106.53856993586 72.354 2 0.24496310284377748 0.00036105427849320016 0.9438714419765777 ['ENSG00000164933|ENST00000297578|SLC25A32'] 84712 15767 QHFEFEYQT True PC9_epitope_Rep3 1227.5196525555898 1227.5185499358602 65.806 2 0.24495736950188382 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 44404 9109 INEVENQILTR True H1975_Epitope_Rep1 1327.7095785835897 1327.7084899358601 39.941 2 0.2449384565126914 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 35255 7454 GSLFLRTPK True NCI_RA007_Epitope_Rep4 1017.5971150306499 1017.59600993586 35.315 2 0.24492932903198592 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000437325.2_1_1:235901419-235901638:+|nuORF'] 108087 16418 TDLLLEPYNK True PC9_epitope_Rep2 1204.6339540318397 1204.6328499358601 68.396 2 0.2449225154727124 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 74345 9633 NIPYFETSAK True H1975_Epitope_Rep1 1168.57643915572 1168.57534993586 41.981 2 0.2449224767841567 0.00036105427849320016 0.9438714419765777 ['ENSG00000075785|ENST00000265062|RAB7A'] 116512 18303 TYDYNFHSF True PC9_epitope_Rep1 1192.48253877088 1192.4814499358602 75.191 2 0.24491609834041111 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 72426 8245 MTEVLPNQRY True H1975_Epitope_Rep1 1249.6125073946098 1249.6114099358601 36.656 2 0.24490873224371934 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100003|O76054-5|SEC14L2', 'nc|ENSG00000100003|O76054-4|SEC14L2', 'ENSG00000100003|ENST00000615189|SEC14L2', 'ENST00000454552.5_3_22:30812232-30824714:+|nuORF'] 140372 17049 YYEKQFPEI True PC9_epitope_Rep1 1215.5811901829898 1215.58008993586 70.404 2 0.24489987863972423 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'nc|ENSG00000141027|O75376-3|NCOR1'] 115879 7872 TVPAYFNDSQR True H1975_Epitope_Rep3 1296.6098645423199 1296.6087699358602 35.255 2 0.24487618902644656 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'HSPA2|p.D209Rfs*26|1|0.14|ENSG00000126803|chr14:64541469-64541470|-/T|frameshift_variant', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 105168 5243 STMSTNGIPR True NCI_RA007_Epitope_Rep3 1062.51279335334 1062.5116899358602 27.627 2 0.24486644508373745 0.00036105427849320016 0.9438714419765777 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 127357 21428 VQPRNWLLF True PC9_epitope_Rep5 1171.6502132326698 1171.64910993586 87.486 2 0.24486488223450645 0.00036105427849320016 0.9438714419765777 ['ENSG00000060762|ENST00000360961|MPC1'] 135697 14391 YEIKQFLECA True H1975_Epitope_Rep3 1242.59546034814 1242.5943699358602 60.707 2 0.24485998772110695 0.00036105427849320016 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2'] 35236 7072 GSHSMRYFYT True NCI_RA007_Epitope_Rep5 1247.5393424543497 1247.5382499358602 33.883 2 0.24485647897421425 0.00036105427849320016 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 98926 8605 SIYGEKFEDEN True NCI_RA007_Epitope_Rep1 1329.57247597409 1329.57136993586 37.472 2 0.2448327729911661 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID'] 49446 13879 KIQEILTQV True PC9_epitope_Rep6 1070.63356010902 1070.6324699358602 65.213 2 0.24483128035290558 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136231|O00425-2|IGF2BP3', 'PRKCA-IGF2BP3|1|fusion', 'ENSG00000136231|ENST00000258729|IGF2BP3', 'ENST00000454907.1_1_6:167114584-167114857:-|nuORF'] 104736 7862 STDKFKTDFY True H1975_Epitope_Rep2 1250.58191845898 1250.58028490379 35.187 3 0.24481491061393668 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 856 9353 ADIEM[Oxidation]PFDPSK True H1975_Epitope_Rep3 1264.5645545231198 1264.56344993586 40.976 2 0.24481101715995965 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 81797 11583 PSEYDTPLY True H1975_Epitope_Rep3 1083.47605640811 1083.4749499358602 49.683 2 0.24479698244359432 0.00036105427849320016 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3', 'SETD3|p.Y313Lfs*18|1|0.19|ENSG00000183576|chr14:99405358-99405359|-/A|frameshift_variant'] 115303 17228 TVDPASLWEY True H1975_Epitope_Rep3 1179.54480467427 1179.54370993586 71.91 2 0.24479279401898973 0.00036105427849320016 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 126715 7966 VPRQPTVTSV True PC9_epitope_Rep2 1082.60840799034 1082.60730993586 36.006 2 0.24478684179100144 0.00036105427849320016 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5'] 83602 4807 QDVDNASLAR True NCI_RA007_Epitope_Rep2 1087.52580056519 1087.52470993586 23.325 2 0.24477664087203224 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 24133 7121 EYSKQMQRF True PC9_epitope_Rep5 1215.57064258263 1215.56954993586 32.358 2 0.2447733800724625 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 80914 10510 PM[Oxidation]FIVNTNVPR True NCI_RA007_Epitope_Rep1 1302.6754423847801 1302.6743499358602 44.865 2 0.2447611603039552 0.00036105427849320016 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 136124 11974 YGFQNALIVR True H1975_Epitope_Rep1 1179.6400424717897 1179.6389499358602 51.064 2 0.24475863611691198 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 15161 6505 EAESSPFVER True H1975_Epitope_Rep3 1149.5302172392899 1149.52912993586 29.991 2 0.2447470545674462 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 133310 5246 WEQQEPGERKL True H1975_Epitope_Rep2 1398.6891774921799 1398.68752490379 25.245 3 0.2447306561082706 0.00036105427849320016 0.9438714419765777 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 136100 13865 YGEPGEVFINK True PC9_epitope_Rep2 1251.6135529404298 1251.61244993586 58.615 2 0.24472399345206178 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 40457 9967 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46506993586 43.329 2 0.24470382009185168 0.00036105427849320016 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 23904 20186 EYMLEKSFYQF True PC9_epitope_Rep4 1483.6693535643901 1483.66824993586 85.783 2 0.24468693177489864 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 22303 15013 ETEEDKFLLL True H1975_Epitope_Rep2 1235.6285342982299 1235.6274299358602 62.899 2 0.24467577730879575 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 22037 4231 ESQSPDTTIQR True NCI_RA007_Epitope_Rep2 1260.594608401 1260.59350993586 21.095 2 0.24467036485813243 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000513944.5_1_5:72144220-72147067:+|nuORF', 'ENST00000518279.5_1_5:72112751-72147067:+|nuORF'] 65006 12018 LSDIASALRY True H1975_Epitope_Rep2 1107.59242357303 1107.5913299358601 51.307 2 0.24464865697525823 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104365|O14920-4|IKBKB', 'nc|ENSG00000104365|O14920-2|IKBKB', 'ENSG00000104365|ENST00000520810|IKBKB', 'ENST00000518647.5_1_8:42129618-42174557:+|nuORF', 'ENST00000520201.5_1_8:42129679-42177019:+|nuORF', 'nc|ENSG00000104365|O14920-3|IKBKB'] 47774 12546 IYQRDPLKL True PC9_epitope_Rep3 1144.6604435631998 1144.65934993586 53.28 2 0.24463947173333514 0.00036105427849320016 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 69476 8146 LVSESSDVLPK True NCI_RA007_Epitope_Rep1 1172.6288686514001 1172.6277699358602 35.685 2 0.24463080188561484 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 112139 13301 TLVEAIKQV True PC9_epitope_Rep6 999.5964463243098 999.59534993586 62.818 2 0.24461606143945278 0.00036105427849320016 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'MOV10|p.V542A|1|0.11|ENSG00000155363|chr1:112695420-112695420|T/C|missense_variant', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 57533 17391 LEKSFYQF True PC9_epitope_Rep5 1060.5229470308798 1060.52184993586 71.896 2 0.24459555764070026 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 69928 17584 LYDPVISKL True PC9_epitope_Rep4 1046.6011973515801 1046.60010993586 75.652 2 0.24456180205216949 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 131944 18995 VYFPDQHINF True PC9_epitope_Rep4 1278.6033226099 1278.6022299358601 81.157 2 0.24454623709361453 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 18295 12564 EITALAPSTMK True PC9_epitope_Rep1 1160.61111041228 1160.61000993586 53.196 2 0.2445460233604653 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77098 12809 NYAFLHRTL True PC9_epitope_Rep2 1133.59817765981 1133.5970899358601 54.571 2 0.24451647027926693 0.00036105427849320016 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 32620 14723 GHFEKPLFL True PC9_epitope_Rep4 1086.58621599378 1086.5851099358601 64.566 2 0.24451570731184472 0.00036105427849320016 0.9438714419765777 ['PNPLA6|p.D881Tfs*24|1|0.35|ENSG00000032444|chr19:7554696-7554696|G/-|frameshift_variant', 'ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6', 'nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 54367 11696 KYQIINEEF True NCI_RA007_Epitope_Rep2 1182.5920892198599 1182.59098993586 50.09 2 0.24450210436461592 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 67203 9257 LTDITKGVQY True H1975_Epitope_Rep2 1136.607739284 1136.60664993586 40.563 2 0.24448285116447693 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 31324 12254 GEAELNWSRL True H1975_Epitope_Rep2 1173.57783613805 1173.5767299358602 52.217 2 0.24447942048864502 0.00036105427849320016 0.9438714419765777 ['ENSG00000163428|ENST00000295628|LRRC58'] 40871 7083 HVLVTLGEK True PC9_epitope_Rep2 994.58113061334 994.58002993586 32.641 2 0.244463811349785 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 132408 18294 VYNEQIRDLL True PC9_epitope_Rep4 1261.6666511424498 1261.66554993586 78.437 2 0.24444063815449196 0.00036105427849320016 0.9438714419765777 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF', 'KIF18A|p.R666Kfs*29|1|0.22|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant'] 8576 11725 AVAEEVNAILK True NCI_RA007_Epitope_Rep1 1155.6499384491499 1155.6488499358602 49.583 2 0.24442098237385537 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 35441 8800 GTDWGEKGYY True H1975_Epitope_Rep3 1174.4931034545798 1174.49200993586 38.855 2 0.2444189622702004 0.00036105427849320016 0.9438714419765777 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000527141.5_1_11:66331406-66331633:-|nuORF'] 139705 17523 YTVEDIQRL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 72.408 2 0.24440006976017792 0.00036105427849320016 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 28009 12376 FQYDHEAFL True H1975_Epitope_Rep1 1168.5189242795998 1168.5178299358602 52.636 2 0.24438290710317237 0.00036105427849320016 0.9438714419765777 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF', 'ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF'] 71287 16390 MHAETAFESL True PC9_epitope_Rep1 1134.5015599633 1134.50046993586 67.867 2 0.24437408500309105 0.00036105427849320016 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 11575 10270 DGTGVVEFVR True H1975_Epitope_Rep1 1077.5454733806098 1077.54436993586 44.448 2 0.24434653865219008 0.00036105427849320016 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 77109 12405 NYAQVLDKF True NCI_RA007_Epitope_Rep4 1096.5553097883198 1096.5542099358602 54.715 2 0.24434438807304418 0.00036105427849320016 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 118661 9117 VEAQLQELQVK True H1975_Epitope_Rep3 1283.7085159544297 1283.7074099358601 40.057 2 0.24432969551077852 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 14558 5874 DVEDESTGLEK True H1975_Epitope_Rep3 1220.5408414926399 1220.53974993586 27.605 2 0.24431606654192728 0.00036105427849320016 0.9438714419765777 ['ENSG00000206075|ENST00000382771|SERPINB5'] 116577 13637 TYGEIFEKF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.5429699358601 59.676 2 0.2443087016287423 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 136547 13926 YHSEVPVSL True PC9_epitope_Rep2 1029.51311062317 1029.51200993586 58.845 2 0.24430427432902702 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 15386 8145 EALQDVEDENQ True NCI_RA007_Epitope_Rep2 1288.5419041218 1288.5408099358601 36.317 2 0.24428106011247633 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000435487.1_1_7:56635601-56635700:-|nuORF'] 41579 6586 IDEPLEGSEDR True H1975_Epitope_Rep3 1258.56772494682 1258.5666299358602 30.287 2 0.24426714155502194 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 135595 8657 YEELQSLAGK True NCI_RA007_Epitope_Rep2 1136.5713537752797 1136.5702499358601 38.321 2 0.24426590050015434 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 131834 19101 VYAQVARLF True PC9_epitope_Rep2 1065.5971150306498 1065.5960099358601 78.843 2 0.24425964896930438 0.00036105427849320016 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 98775 14141 SISLYYTGEK True PC9_epitope_Rep3 1159.57610480255 1159.5750099358602 59.479 2 0.24424815389409557 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 12590 12587 DLDSRVLYY True H1975_Epitope_Rep1 1142.5607890915799 1142.5596899358602 53.465 2 0.24423468862056164 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 26250 7685 FIAIKPDGVQR True NCI_RA007_Epitope_Rep1 1242.7084563847798 1242.70681490379 33.886 3 0.2442210839818602 0.00036105427849320016 0.9438714419765777 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF', 'NMT1-NME1|1|fusion'] 77199 12088 NYGRVFSEW True NCI_RA007_Epitope_Rep3 1156.53015766964 1156.5290699358602 54.667 2 0.24421088770483798 0.00036105427849320016 0.9438714419765777 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 140078 8534 YVNGLTLGGQK True NCI_RA007_Epitope_Rep1 1148.6189726740397 1148.6178699358602 37.196 2 0.2441948556586513 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 77645 20330 NYYKVNWTF True PC9_epitope_Rep3 1233.5818588893296 1233.5807699358602 83.449 2 0.24419014179483334 0.00036105427849320016 0.9438714419765777 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 28997 20918 FTIFRTISV True PC9_epitope_Rep3 1082.6124307416198 1082.61132993586 85.738 2 0.2441572330768962 0.00036105427849320016 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 131942 19709 VYFPDQHINF True PC9_epitope_Rep2 1278.6033226099 1278.6022299358601 81.198 2 0.24411201841810753 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 137341 20456 YLKDLIEEV True PC9_epitope_Rep3 1120.6015912743999 1120.6004899358602 83.94 2 0.24407981325503392 0.00036105427849320016 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 75538 17074 NQLEAEIHL True PC9_epitope_Rep2 1065.54547338061 1065.54436993586 70.927 2 0.24407797716226456 0.00036105427849320016 0.9438714419765777 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'GOPC|p.R248C|1|0.66|ENSG00000047932|chr6:117573541-117573541|G/A|missense_variant', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 53445 10982 KVIDPATATSV True PC9_epitope_Rep1 1100.607739284 1100.60664993586 47.132 2 0.24406739994943658 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 93997 3814 RVPVEKPVYK True NCI_RA007_Epitope_Rep4 1213.7182927924898 1213.71664490379 20.855 3 0.24404811392951428 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184428|Q969P6-2|TOP1MT', 'ENSG00000184428|ENST00000329245|TOP1MT'] 16561 8496 EEQLQQIRAE True PC9_epitope_Rep2 1242.6204292260197 1242.6193299358602 38.045 2 0.24404295097948428 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 77336 11778 NYKKFYEQF True PC9_epitope_Rep6 1265.6080736371698 1265.6069699358602 56.473 2 0.24404117817943963 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 21040 10589 ERDDMIHQL True PC9_epitope_Rep1 1155.5342570739099 1155.5326049037901 45.623 3 0.24402052133910096 0.00036105427849320016 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 67463 9623 LTEEKMELY True H1975_Epitope_Rep2 1154.5529268298199 1154.55182993586 41.992 2 0.2440178447138099 0.00036105427849320016 0.9438714419765777 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant'] 56495 5418 LDTNADKQL True NCI_RA007_Epitope_Rep5 1016.51383889916 1016.51274993586 27.529 2 0.244012449962203 0.00036105427849320016 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 106908 13274 SYIQRLVQI True NCI_RA007_Epitope_Rep4 1118.64479349906 1118.64368993586 58.193 2 0.24398581184538995 0.00036105427849320016 0.9438714419765777 ['ENSG00000101347|ENST00000646673|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1'] 72406 14996 MTELPAPLSY True H1975_Epitope_Rep1 1120.5474475265598 1120.54634993586 62.927 2 0.24397847701419947 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 23850 11581 EYLTKVDKL True PC9_epitope_Rep1 1107.6175756917098 1107.61646993586 49.424 2 0.24396335426830748 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 84720 19536 QHFNGLLEI True PC9_epitope_Rep2 1069.55564414149 1069.5545499358602 80.529 2 0.24396215272546495 0.00036105427849320016 0.9438714419765777 ['TNPO3|p.V807*|1|0.18|ENSG00000064419|chr7:128972437-128972437|C/-|frameshift_variant', 'nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3'] 6880 15791 AQIKELEEL True PC9_epitope_Rep5 1071.58119018299 1071.58008993586 65.728 2 0.2439529677258818 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 7899 7814 ATATANQIILK True NCI_RA007_Epitope_Rep2 1142.66592286646 1142.66482993586 35.024 2 0.24395171901865662 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 47537 23311 IYLPYLQNW True PC9_epitope_Rep3 1208.6229954253201 1208.62188993586 94.945 2 0.2439241165503118 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 67489 12761 LTEKELLLY True H1975_Epitope_Rep2 1120.63797678312 1120.6368699358602 54.189 2 0.24391848723840265 0.00036105427849320016 0.9438714419765777 ['ENSG00000101400|ENST00000217381|SNTA1'] 48588 5808 KEIEELQSQA True NCI_RA007_Epitope_Rep4 1173.58773211541 1173.5866299358602 28.965 2 0.2439158064238943 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 61688 17623 LLIDDKGTIKL True PC9_epitope_Rep2 1227.74383883399 1227.74218490379 73.066 3 0.24390802067568051 0.00036105427849320016 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 68099 9186 LTPEEEEILNK True H1975_Epitope_Rep3 1313.6714617393698 1313.6703699358602 40.324 2 0.24390055713056935 0.00036105427849320016 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 89645 8936 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 39.332 3 0.2438976597346333 0.00036105427849320016 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 124270 6422 VLDEADEM[Oxidation]LNK True H1975_Epitope_Rep1 1291.5965829273898 1291.59548993586 29.762 2 0.24389613190638534 0.00036105427849320016 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3'] 115872 9178 TVNVVQFEPSK True H1975_Epitope_Rep1 1246.65575210558 1246.65464993586 40.21 2 0.24388453733699472 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 24200 15517 EYVEKFYRI True PC9_epitope_Rep1 1245.6393737654498 1245.63826993586 64.509 2 0.24386516235022937 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 136377 16616 YHDINVYSL True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 71.884 2 0.2438638181796703 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 75381 18167 NQDKNFAFL True PC9_epitope_Rep5 1095.53490869691 1095.53380993586 74.888 2 0.2438594897590346 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 52753 18074 KQMEQISQFL True PC9_epitope_Rep4 1250.6329084860197 1250.63180993586 77.582 2 0.24384120865188716 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 140821 10052 YYSPTKNEI True PC9_epitope_Rep5 1113.53423999057 1113.5331499358601 43.644 2 0.2438333174836381 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 71565 7905 M[Oxidation]LDSHEELY True H1975_Epitope_Rep2 1151.48049054599 1151.4793899358601 35.354 2 0.2438298688055051 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 68792 14677 LVDPWTPHLY True H1975_Epitope_Rep3 1239.62880908175 1239.6277099358601 61.825 2 0.24381191218669562 0.00036105427849320016 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 8012 11507 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.4858499358602 49.319 2 0.24381134152953152 0.00036105427849320016 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 53094 11339 KSDVEAIFSK True PC9_epitope_Rep3 1122.5920892198599 1122.59098993586 48.622 2 0.2438032808498114 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 23329 9160 EVTEFEDIK True NCI_RA007_Epitope_Rep2 1108.5288202569598 1108.5277299358602 40.237 2 0.24380224439805342 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 96733 10370 SEQGINEFLR True H1975_Epitope_Rep1 1191.58840082175 1191.58730993586 44.837 2 0.243800569210464 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 26845 11885 FLEQVHQLY True H1975_Epitope_Rep2 1175.59750895347 1175.59640993586 50.795 2 0.24378845094205737 0.00036105427849320016 0.9438714419765777 ['STAT1|p.D627Tfs*31|1|0.13|ENSG00000115415|chr2:190976999-190977020|AGGGTTCAACCGCATGGAAGTC/-|frameshift_variant', 'nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 6724 21124 AQDEHLITFF True PC9_epitope_Rep5 1219.58733819259 1219.58624993586 86.314 2 0.24377948959126744 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 20700 12999 EQISDIDDAVR True PC9_epitope_Rep1 1259.59935942827 1259.5982699358601 54.871 2 0.24375639530030255 0.00036105427849320016 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 69846 11841 LYADVGGKQF True PC9_epitope_Rep6 1096.55530978832 1096.5542099358602 56.753 2 0.2437485263987709 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 117045 17876 TYQLGFHSI True PC9_epitope_Rep5 1064.52909504048 1064.5279899358602 73.778 2 0.24374527991354433 0.00036105427849320016 0.9438714419765777 ['ENSG00000142507|ENST00000270586|PSMB6'] 64037 9637 LQDFFNGR True H1975_Epitope_Rep3 995.4824792012299 995.48138993586 42.086 2 0.24374163022212977 0.00036105427849320016 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 87051 14054 QSDPWQQELY True H1975_Epitope_Rep1 1292.5673310240002 1292.5667749679299 59.224 1 0.2437391010145532 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 22166 10171 ETALLVDRY True H1975_Epitope_Rep2 1078.56587447202 1078.56476993586 44.125 2 0.2437205182169305 0.00036105427849320016 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 139441 7332 YTERAVFRY True H1975_Epitope_Rep1 1203.6036569630699 1203.6020249037902 33.211 3 0.2437198337306633 0.00036105427849320016 0.9438714419765777 ['ENSG00000104142|ENST00000220509|VPS18'] 26530 19885 FIVEEIQRI True PC9_epitope_Rep2 1145.6444591458899 1145.6433699358602 81.88 2 0.24371427757607125 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 106950 13843 SYLDRTEQL True PC9_epitope_Rep1 1123.55095268387 1123.54984993586 58.091 2 0.24371328301274592 0.00036105427849320016 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 86117 10045 QPQPQPYAV True PC9_epitope_Rep6 1026.5134449763398 1026.5123499358601 49.219 2 0.24370468406666096 0.00036105427849320016 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 4821 6586 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep5 1219.5754535599897 1219.57434993586 30.304 2 0.24370311432097544 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 139447 6474 YTETEPYHNY True H1975_Epitope_Rep1 1315.5356965425499 1315.5345899358601 29.964 2 0.24369545227094194 0.00036105427849320016 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 54243 20916 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61098993586 88.612 2 0.2436893716766234 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 73060 8585 NDLAVVDVR True NCI_RA007_Epitope_Rep5 999.53490869691 999.53380993586 39.702 2 0.24368931190115928 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 56953 9217 LEDVRNGIYP True H1975_Epitope_Rep1 1174.59823722946 1174.5971499358602 40.362 2 0.2436882688554999 0.00036105427849320016 0.9438714419765777 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2', 'ENST00000486701.1_1_2:27663393-27664286:+|nuORF', 'nc|ENSG00000185189|Q9NSY0-2|NRBP2', 'ENST00000423469.6_1_8:144917834-144920143:-|nuORF', 'nc|ENSG00000185189|Q9NSY0-4|NRBP2', 'ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 29258 8934 FVDFNSEEDAK True NCI_RA007_Epitope_Rep1 1299.5619112903898 1299.56080993586 38.752 2 0.24368416660643888 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 120237 17502 VFNPYTEFK True PC9_epitope_Rep5 1143.5600608155898 1143.5589699358602 72.324 2 0.2436828458643937 0.00036105427849320016 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2'] 48432 6765 KEEDYIRYA True H1975_Epitope_Rep2 1185.56660274801 1185.56494490379 30.937 3 0.24367597980060873 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 6892 14820 AQIKPFYTV True PC9_epitope_Rep4 1065.5858816406098 1065.58478993586 64.942 2 0.24367594372388365 0.00036105427849320016 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 17709 17678 EHSLVIDTL True PC9_epitope_Rep1 1025.53932537101 1025.53822993586 72.793 2 0.2436717484221501 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 131911 16578 VYENVSHFL True PC9_epitope_Rep4 1106.53965972418 1106.53856993586 71.743 2 0.24366343697614823 0.00036105427849320016 0.9438714419765777 ['ENSG00000164933|ENST00000297578|SLC25A32'] 52709 15577 KQLDDLKVEL True PC9_epitope_Rep1 1199.6761531969898 1199.6745149037902 64.739 3 0.24366101915227711 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 33912 11385 GM[Oxidation]DVAASEFFR True NCI_RA007_Epitope_Rep2 1244.54957316532 1244.54846993586 48.873 2 0.24365482884532272 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 17548 17504 EHIPNSPFHVL True PC9_epitope_Rep5 1288.65642081192 1288.65478490379 72.332 3 0.24364465337142094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 48928 7452 KEYAVNEVVA True H1975_Epitope_Rep3 1120.57643915572 1120.57534993586 33.642 2 0.2436390150911841 0.00036105427849320016 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 41420 11358 IASPEGQDYLK True PC9_epitope_Rep5 1219.6084675599898 1219.60736993586 48.684 2 0.24363209408186787 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 17172 14426 EHAFAVQQL True PC9_epitope_Rep1 1041.5243440132099 1041.5232499358601 60.313 2 0.2436301300007594 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 95038 9045 RYQTQPVTL True PC9_epitope_Rep6 1104.5927579261997 1104.5916699358602 44.845 2 0.24360130497047108 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 108091 16873 TDLLLEPYNK True PC9_epitope_Rep5 1204.6339540318397 1204.6328499358601 69.912 2 0.2436008666747201 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 104697 14071 STATAFYRL True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 62.035 2 0.24359797039277967 0.00036105427849320016 0.9438714419765777 ['ENSG00000008394|ENST00000396210|MGST1', 'nc|ENSG00000008394|P10620-2|MGST1', 'ENST00000539708.5_1_12:16507186-16513330:+|nuORF', 'ENST00000539036.5_1_12:16500588-16536519:+|nuORF', 'ENST00000538857.1_1_12:16507186-16536519:+|nuORF', 'ENST00000537878.5_1_12:16500588-16507345:+|nuORF'] 106682 18824 SYANVKQWL True PC9_epitope_Rep5 1107.57129420563 1107.57018993586 77.421 2 0.24359516655273095 0.00036105427849320016 0.9438714419765777 ['ENSG00000174903|ENST00000311481|RAB1B', 'nc|ENSG00000233111|Q92928|RAB1C'] 74158 8468 NHYQKQLEI True PC9_epitope_Rep1 1171.5985715826298 1171.59746993586 37.407 2 0.2435901284318954 0.00036105427849320016 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 93843 19685 RVFIGNLNTL True PC9_epitope_Rep3 1145.65569253593 1145.65458993586 80.949 2 0.24358925954268704 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 12085 14511 DIFEAQIAGLR True H1975_Epitope_Rep1 1231.6560864587498 1231.6549899358602 61.019 2 0.24357628877896997 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 131919 13480 VYERELQTF True PC9_epitope_Rep2 1183.5873381925899 1183.58624993586 57.136 2 0.24357618958258287 0.00036105427849320016 0.9438714419765777 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 94797 18241 RYLQTLTTI True PC9_epitope_Rep1 1107.62880908175 1107.6277099358601 74.956 2 0.243567321466726 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 54178 14289 KYPDIISRI True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 62.863 2 0.24355032518734673 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 103566 14897 SRDEYYHLL True PC9_epitope_Rep1 1194.56693710118 1194.56530490379 62.121 3 0.24354771488746615 0.00036105427849320016 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 71007 7334 MEQQTLSIAKA True H1975_Epitope_Rep3 1218.62782310558 1218.62672993586 33.186 2 0.24354643992239136 0.00036105427849320016 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 132850 11398 VYTPVASRQSL True PC9_epitope_Rep5 1219.65608645875 1219.6549899358602 48.84 2 0.24354264712715312 0.00036105427849320016 0.9438714419765777 ['ENSG00000070950|ENST00000264926|RAD18', 'RAD18|p.D408Tfs*40|2|0.17|ENSG00000070950|chr3:8898994-8898994|C/-|frameshift_variant', 'RAD18|p.E392Kfs*4|1|0.11|ENSG00000070950|chr3:8899042-8899042|C/-|frameshift_variant'] 33786 14950 GLSTEGIYRV True PC9_epitope_Rep1 1093.57677350889 1093.57566993586 62.327 2 0.24353224105612106 0.00036105427849320016 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 25822 9906 FGEENIEVYHS True H1975_Epitope_Rep1 1322.5778957077 1322.57678993586 43.039 2 0.2435055418097834 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 26707 7824 FLDESRSTQY True H1975_Epitope_Rep2 1244.567331024 1244.56622993586 35.044 2 0.24350123485141348 0.00036105427849320016 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 83112 22328 PYNPLWAQL True PC9_epitope_Rep5 1100.5654805492 1100.5643899358602 90.894 2 0.24350020050395824 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 53254 4621 KTFTKWVNK True NCI_RA007_Epitope_Rep4 1150.6498788795 1150.6482449037899 24.19 3 0.24349844773451054 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant', 'ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion', 'ENST00000467673.5_1_1:39571193-39720158:+|nuORF'] 104734 7804 STDKFKTDFY True H1975_Epitope_Rep1 1250.58191845898 1250.58028490379 34.972 3 0.24349640554464105 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 61213 20444 LLDPNVKSIFV True PC9_epitope_Rep2 1243.71762408615 1243.71652993586 84.066 2 0.2434943758385998 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3', 'ENSG00000117419|ENST00000372257|ERI3'] 26400 4829 FIKVPQNQNGK True NCI_RA007_Epitope_Rep1 1271.6986199770697 1271.69698490379 22.864 3 0.24348470290916976 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 109989 20034 THSQFIVVSL True PC9_epitope_Rep1 1129.6131590176099 1129.61206993586 81.888 2 0.24348293588178288 0.00036105427849320016 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 19344 10333 ELNEFLTR True NCI_RA007_Epitope_Rep2 1020.52400966004 1020.52290993586 44.784 2 0.24347430666606062 0.00036105427849320016 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 130381 8805 VTVGVDGTLYK True NCI_RA007_Epitope_Rep3 1150.62338934814 1150.6222899358602 41.724 2 0.24347264265258975 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1', 'ENST00000447818.2_1_X:79827372-79827747:-|nuORF', 'ENSG00000159399|ENST00000290573|HK2'] 89373 8589 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 38.029 2 0.2434635725552865 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 30179 19638 FYTVIPHNF True PC9_epitope_Rep2 1136.5654805492 1136.5643899358602 80.922 2 0.2434459867794197 0.00036105427849320016 0.9438714419765777 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 105573 7779 SVDYGQTHYY True H1975_Epitope_Rep3 1231.51456717515 1231.51346993586 34.906 2 0.24343141632180865 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000020577|Q9UPU9-2|SAMD4A', 'nc|ENSG00000020577|Q9UPU9-3|SAMD4A', 'ENSG00000020577|ENST00000554335|SAMD4A', 'ENST00000557013.1_1_14:55168817-55201659:+|nuORF', 'ENST00000555112.1_1_14:55034634-55169324:+|nuORF'] 131653 21338 VWFRIPNQF True PC9_epitope_Rep3 1205.6345631685297 1205.6334699358601 87.372 2 0.24342566983992633 0.00036105427849320016 0.9438714419765777 ['ENSG00000013583|ENST00000014930|HEBP1'] 23883 6290 EYMKHTRLF True NCI_RA007_Epitope_Rep5 1223.6121134717898 1223.61046490379 30.874 3 0.24340412166576722 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 70375 20675 LYQDKFPFF True PC9_epitope_Rep4 1203.5964463243097 1203.5953499358602 87.684 2 0.24337556959373996 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 53466 19159 KVIEINPYL True PC9_epitope_Rep3 1087.62774645259 1087.62664993586 78.916 2 0.2433450672110239 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'PSMB8|p.G115V|1|0.5|ENSG00000204264|chr6:32842735-32842735|C/A|missense_variant', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 132225 7941 VYKPAQNSW True PC9_epitope_Rep6 1091.5399940773498 1091.5388899358602 39.987 2 0.2433319905160174 0.00036105427849320016 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 114337 6625 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 30.391 2 0.2433119552562885 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 140728 14533 YYQHIVTTL True PC9_epitope_Rep2 1136.5866099166 1136.58550993586 61.173 2 0.24329736016365347 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 20917 6644 EQVANSAFVER True H1975_Epitope_Rep3 1248.6098645423197 1248.6087699358602 30.51 2 0.24328446326526287 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 14939 12602 DYMKTTSNF True PC9_epitope_Rep5 1105.47501086229 1105.47390993586 53.474 2 0.2432788080918743 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 65787 14735 LSISETYDLK True PC9_epitope_Rep4 1167.6023195503901 1167.6012299358601 64.611 2 0.24326936075376354 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 82968 14558 PYAKPIPAQF True PC9_epitope_Rep1 1130.6124307416196 1130.61132993586 60.821 2 0.24326480482646878 0.00036105427849320016 0.9438714419765777 ['ENSG00000136709|ENST00000322313|WDR33'] 1816 4342 AEIDNIKNQRA True H1975_Epitope_Rep3 1270.6629627443401 1270.66186993586 21.819 2 0.2432561402863751 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 28263 13779 FRVKYETEL True PC9_epitope_Rep1 1183.62372370131 1183.62262993586 57.848 2 0.24325107790188616 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 60951 10513 LLADPTGAFGK True H1975_Epitope_Rep3 1088.5866099165999 1088.58550993586 45.502 2 0.2432349018947099 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 71811 13195 M[Oxidation]NVLADALK True PC9_epitope_Rep2 989.52156751233 989.52046993586 56.032 2 0.24321876541596357 0.00036105427849320016 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 139735 18209 YTYEELLNRV True PC9_epitope_Rep6 1298.65066672514 1298.6495699358602 82.682 2 0.24320147986704121 0.00036105427849320016 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 92148 4603 RQAPQPQSSL True NCI_RA007_Epitope_Rep4 1110.57817049122 1110.5770699358602 24.118 2 0.24319977082564487 0.00036105427849320016 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B'] 7858 9462 ATALEYVYK True NCI_RA007_Epitope_Rep5 1056.54916177872 1056.5480699358602 43.031 2 0.24319782245964663 0.00036105427849320016 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 91360 6497 RMQKEITAL True NCI_RA007_Epitope_Rep2 1088.60121443492 1088.60010993586 29.881 2 0.24318764428436299 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 48984 10350 KFDQLLAEEK True PC9_epitope_Rep2 1219.6448530687096 1219.64320490379 45.136 3 0.24318519847534117 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 94873 14341 RYNPNLNTW True PC9_epitope_Rep5 1176.5676058075198 1176.56650993586 60.164 2 0.2431736011819642 0.00036105427849320016 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 54415 8035 KYSLIKGNF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 37.597 2 0.24316978023465277 0.00036105427849320016 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 47885 10313 IYTSSVNRL True PC9_epitope_Rep5 1051.56620882519 1051.5651099358602 44.654 2 0.24316512656630984 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 14937 12707 DYMKTTSNF True PC9_epitope_Rep3 1105.47501086229 1105.47390993586 53.901 2 0.2431627295224898 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 26662 19915 FLASESLIKQI True PC9_epitope_Rep2 1247.71253870571 1247.7114499358602 81.998 2 0.24315321754954447 0.00036105427849320016 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 30016 19337 FYHKYFNYL True PC9_epitope_Rep3 1293.61824439805 1293.6166049037902 79.6 3 0.24312830608724853 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 71733 6048 MMDPNSTQRY True H1975_Epitope_Rep2 1241.51689275761 1241.51578993586 28.243 2 0.24311642523953875 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 139272 12478 YTDHLQSYVIY True H1975_Epitope_Rep2 1400.6612314088402 1400.6601299358601 53.087 2 0.24311129057577774 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENSG00000090989|ENST00000381295|EXOC1', 'ENST00000511971.5_1_4:56749994-56766742:+|nuORF'] 43180 8615 IGSLIDVNQSK True H1975_Epitope_Rep3 1172.6401020414398 1172.63900993586 38.13 2 0.24310729885079904 0.00036105427849320016 0.9438714419765777 ['ENST00000544850.5_1_12:10758876-10761762:-|nuORF', 'nc|ENSG00000162385|P61326-2|MAGOH', 'ENSG00000162385|ENST00000371470|MAGOH', 'ENSG00000111196|ENST00000320756|MAGOHB'] 113562 18338 TQYPFDFRGA True PC9_epitope_Rep2 1200.5563724174797 1200.55526993586 75.868 2 0.2431031553754454 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 139682 7260 YTTDRVM[Oxidation]TV True PC9_epitope_Rep5 1100.5172104078802 1100.5161099358602 32.888 2 0.24309616685473776 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 74160 6605 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59746993586 30.818 2 0.24308303684590776 0.00036105427849320016 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 29119 8083 FTSIGEDYDER True H1975_Epitope_Rep1 1330.5677249468197 1330.5666299358602 36.034 2 0.2430729914804039 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 138889 7589 YSDSLVQKGY True H1975_Epitope_Rep3 1158.5557037111398 1158.55460993586 34.172 2 0.24306027515728246 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 39138 6449 HLDTLTEHY True H1975_Epitope_Rep2 1127.52473793603 1127.52364993586 29.726 2 0.24304078274573582 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 132980 17629 VYVDLGGSHVF True PC9_epitope_Rep6 1191.5924235730301 1191.5913299358601 80.451 2 0.24302822854512363 0.00036105427849320016 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 4687 9612 ALDGRETDFY True H1975_Epitope_Rep3 1185.5302172392899 1185.52912993586 41.986 2 0.24297894105434825 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 5206 18549 ALPSKLPTF True PC9_epitope_Rep1 972.56441792004 972.56332993586 76.138 2 0.24296632028360826 0.00036105427849320016 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 94405 11620 RYFDPANGKF True PC9_epitope_Rep4 1213.5880068989297 1213.5869099358601 52.455 2 0.2429637654223116 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 41003 21739 HYFDPQYFEF True PC9_epitope_Rep5 1391.58225281215 1391.5811499358601 88.65 2 0.2429554825948018 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I'] 100328 10107 SLMHSFILK True NCI_RA007_Epitope_Rep5 1074.5895871220598 1074.58848993586 45.511 2 0.24294778122198415 0.00036105427849320016 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 1402 14502 AEEFPNLAV True H1975_Epitope_Rep3 988.4865615221598 988.48546993586 61.143 2 0.24294711866174307 0.00036105427849320016 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 25881 19613 FGIDLDTRV True PC9_epitope_Rep5 1034.53965972418 1034.53856993586 80.494 2 0.24294099675470054 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 52627 6308 KQEELEAALQR True H1975_Epitope_Rep3 1313.6939285194496 1313.6928299358601 29.268 2 0.24292710293392533 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 118292 5807 VDATAETDLAK True H1975_Epitope_Rep1 1132.5611830144 1132.56008993586 27.409 2 0.24292242314085122 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 106286 5333 SVQSDQGYISR True NCI_RA007_Epitope_Rep5 1238.58912909774 1238.58802993586 27.206 2 0.24292111870349029 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 132316 12181 VYLPNINKI True NCI_RA007_Epitope_Rep5 1072.62808080576 1072.6269899358601 53.507 2 0.24290644369924078 0.00036105427849320016 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 53787 10358 KYFLKPEVL True NCI_RA007_Epitope_Rep4 1135.6641319613097 1135.66302993586 46.698 2 0.24286956844574303 0.00036105427849320016 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 73316 11206 NELESYAYSLK True H1975_Epitope_Rep1 1315.62959692739 1315.6284899358602 48.074 2 0.24286838338244993 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 26004 20644 FHDDWISSI True PC9_epitope_Rep5 1118.5032742154601 1118.5021699358601 84.46 2 0.24286514469103695 0.00036105427849320016 0.9438714419765777 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 114872 10640 TTDPYLTNSY True H1975_Epitope_Rep3 1173.5189838492502 1173.51788993586 46.0 2 0.24285990998937443 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 40601 6283 HTDPDYSAAY True H1975_Epitope_Rep3 1138.45671794586 1138.45562993586 29.173 2 0.24285828987677346 0.00036105427849320016 0.9438714419765777 ['ENST00000579053.5_1_18:691132-706776:-|nuORF', 'ENST00000580605.5_1_18:693172-712587:-|nuORF', 'ENST00000578651.5_1_18:683014-712587:-|nuORF', 'ENSG00000132199|ENST00000647584|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-4|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-5|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-3|ENOSF1'] 9837 14046 AYLLNLNHL True NCI_RA007_Epitope_Rep5 1069.59202965021 1069.59092993586 60.718 2 0.24285558752241396 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 136379 18189 YHDINVYSL True PC9_epitope_Rep5 1122.53457434374 1122.53346993586 74.973 2 0.24285520612697553 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 140858 12824 YYTKGFALL True NCI_RA007_Epitope_Rep3 1074.5749826037397 1074.57388993586 57.685 2 0.24285352532910362 0.00036105427849320016 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 131652 21428 VWFRIPNQF True PC9_epitope_Rep1 1205.6345631685297 1205.6334699358601 87.261 2 0.2428361167377998 0.00036105427849320016 0.9438714419765777 ['ENSG00000013583|ENST00000014930|HEBP1'] 4389 11866 AIRLELQGPR True PC9_epitope_Rep5 1151.6774906096698 1151.67583490379 50.641 3 0.2428308900871841 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 35606 12480 GTLDYILQR True NCI_RA007_Epitope_Rep1 1077.5818588893299 1077.5807699358602 52.522 2 0.2428192012143225 0.00036105427849320016 0.9438714419765777 ['ENSG00000140718|ENST00000471389|FTO'] 137151 9362 YLDPNQRDLY True H1975_Epitope_Rep1 1295.61461556959 1295.61350993586 40.918 2 0.242817747802026 0.00036105427849320016 0.9438714419765777 ['ENSG00000189144|ENST00000536220|ZNF573'] 111328 20886 TLIDLPGITKV True PC9_epitope_Rep5 1168.70672504928 1168.70562993586 85.39 2 0.24280733721852693 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3'] 13808 7245 DQVANSAFVER True NCI_RA007_Epitope_Rep5 1234.59421447818 1234.5931099358602 34.545 2 0.24280540007922083 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 106398 19223 SVTDLAFKV True PC9_epitope_Rep3 978.5385970950199 978.53750993586 79.161 2 0.24280248434056229 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 90326 5914 RIFEPPPPK True NCI_RA007_Epitope_Rep4 1079.61276509479 1079.6116699358602 29.37 2 0.24280217736783982 0.00036105427849320016 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 14186 4083 DSSPDSAEDVR True NCI_RA007_Epitope_Rep2 1176.48947462612 1176.4883699358602 20.52 2 0.24279997055052308 0.00036105427849320016 0.9438714419765777 ['CON__P12763', 'ENST00000478441.1_1_3:186333572-186335301:+|nuORF', 'ENSG00000145192|ENST00000411641|AHSG'] 130674 10022 VVDEDHELIY True H1975_Epitope_Rep2 1230.5768330785402 1230.5757299358602 43.541 2 0.2427796689083831 0.00036105427849320016 0.9438714419765777 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 7975 7871 ATDLTREVY True H1975_Epitope_Rep3 1066.5294889632999 1066.52838993586 35.251 2 0.24276011473407258 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 37512 10829 GYIERPQLI True NCI_RA007_Epitope_Rep5 1087.6025943339098 1087.6014899358602 48.287 2 0.24275765997026433 0.00036105427849320016 0.9438714419765777 ['ENSG00000164329|ENST00000453514|TENT2', 'nc|ENSG00000164329|Q6PIY7-2|TENT2'] 52791 9191 KQTALVELLK True NCI_RA007_Epitope_Rep5 1141.7070594024499 1141.7054249037901 42.005 3 0.24275696241224404 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 17769 22163 EHVFWVVSL True PC9_epitope_Rep1 1114.5811306133398 1114.58002993586 90.067 2 0.24275511748380213 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 105033 5499 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 28.634 3 0.24275345276838378 0.00036105427849320016 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 97048 10970 SEYERIEIP True H1975_Epitope_Rep2 1134.5557037111398 1134.55460993586 47.225 2 0.24273237158626074 0.00036105427849320016 0.9438714419765777 ['ENST00000453705.1_3_X:154299864-154348422:+|nuORF', 'ENSG00000185515|ENST00000330045|BRCC3', 'nc|ENSG00000185515|P46736-3|BRCC3'] 105141 15691 STLTEEGVIKV True PC9_epitope_Rep1 1174.64451871554 1174.64342993586 65.177 2 0.24269902126435203 0.00036105427849320016 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 73919 17209 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69592490379 71.35 3 0.24269872352704203 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 1754 4787 AEHDSILAEKA True H1975_Epitope_Rep2 1182.5880664685799 1182.58642490379 23.502 3 0.24268959078396976 0.00036105427849320016 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 64440 17483 LQSDRVLYL True PC9_epitope_Rep5 1105.6131590176099 1105.61206993586 72.25 2 0.2426710667142172 0.00036105427849320016 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4'] 136544 14715 YHSEVPVSL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 61.423 2 0.24266560553802805 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 23949 10960 EYNSDLHQF True PC9_epitope_Rep4 1151.4883524273098 1151.48724993586 49.929 2 0.24264991049800425 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 59735 5396 LGVIEDHSNR True PC9_epitope_Rep5 1138.5730851107799 1138.57144490379 25.768 3 0.24264676717742817 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 89726 9971 REYQELMSV True H1975_Epitope_Rep3 1153.54375912845 1153.5426699358602 43.387 2 0.24264524709973911 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 94537 22733 RYILEPFFI True PC9_epitope_Rep3 1196.65938093404 1196.65828993586 92.708 2 0.24263835511990106 0.00036105427849320016 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 88012 6971 QVSPEAGVQKV True PC9_epitope_Rep2 1140.6138872935999 1140.61278993586 32.209 2 0.24263089714429406 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 42232 3199 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 16.921 2 0.24262951032079458 0.00036105427849320016 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 94011 6841 RVQEAVESMVK True NCI_RA007_Epitope_Rep4 1274.66527124346 1274.6641699358602 32.934 2 0.2426219495042128 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 22344 4754 ETEKMIEKY True H1975_Epitope_Rep3 1169.5638258666897 1169.56272993586 23.412 2 0.2426156734948119 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 40563 4355 HSSQDVHVVLK True NCI_RA007_Epitope_Rep2 1247.6622344683499 1247.66059490379 21.576 3 0.2426153204087127 0.00036105427849320016 0.9438714419765777 ['ENSG00000088833|ENST00000216879|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-5|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-6|NSFL1C'] 68830 12842 LVDTFLEDVK True H1975_Epitope_Rep1 1177.6230549949698 1177.6219499358601 54.465 2 0.24258430481308865 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 71719 4928 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 24.082 2 0.24254966991970386 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 116884 18317 TYNYPVHYF True PC9_epitope_Rep1 1202.53965972418 1202.53856993586 75.246 2 0.24254441193262488 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 94133 16710 RWFQPAIPSW True NCI_RA007_Epitope_Rep2 1286.6560268890996 1286.65492993586 69.731 2 0.2425244274880866 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 107165 15987 SYNNFFRMF True NCI_RA007_Epitope_Rep3 1224.53861417836 1224.53750993586 70.555 2 0.24251938465020323 0.00036105427849320016 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 95027 7148 RYQTQPVTL True NCI_RA007_Epitope_Rep3 1104.5927579261997 1104.5916699358602 35.234 2 0.2424930440271524 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 60646 8370 LITLEEEM[Oxidation]TK True NCI_RA007_Epitope_Rep2 1221.61625574281 1221.61514993586 37.198 2 0.24248754744631115 0.00036105427849320016 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 85366 11180 QLDTRVSEFY True H1975_Epitope_Rep2 1256.60371653272 1256.60260993586 48.042 2 0.2424849666519858 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 114443 5178 TSEDISQTSKY True H1975_Epitope_Rep3 1257.5724759740901 1257.57136993586 25.017 2 0.242470973554525 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 85431 4959 QLETLGQEK True NCI_RA007_Epitope_Rep5 1044.5451390274397 1044.5440499358601 25.776 2 0.2424620724753315 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 124453 7005 VLETAEDIQER True H1975_Epitope_Rep3 1301.6463096206896 1301.64520993586 31.908 2 0.24245455140900285 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 76820 10807 NVEQAFQTIAR True H1975_Epitope_Rep3 1275.65714908791 1275.6560499358602 46.649 2 0.24244917557027254 0.00036105427849320016 0.9438714419765777 ['ENSG00000075785|ENST00000265062|RAB7A'] 31153 10913 GDEELDSLIK True H1975_Epitope_Rep1 1117.5502839775297 1117.54918993586 46.939 2 0.24244585273520955 0.00036105427849320016 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 46210 14028 ITDLPDHLLSY True H1975_Epitope_Rep3 1285.6554177524101 1285.65432993586 59.28 2 0.24242833430228475 0.00036105427849320016 0.9438714419765777 ['ENST00000406829.2_2_7:7812042-7917166:+|nuORF', 'ENSG00000219545|ENST00000682710|UMAD1'] 94006 7221 RVQEAVESMVK True NCI_RA007_Epitope_Rep2 1274.66527124346 1274.6641699358602 32.707 2 0.24240226989856428 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 137134 11458 YLDIPNPRY True H1975_Epitope_Rep2 1149.58185888933 1149.5807699358602 49.128 2 0.2424006406945697 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 140373 16266 YYEKQFPEI True PC9_epitope_Rep2 1215.5811901829898 1215.58008993586 67.808 2 0.24238568457643567 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'nc|ENSG00000141027|O75376-3|NCOR1'] 112362 13054 TNAENEFVTIK True PC9_epitope_Rep1 1264.6299312805597 1264.62882993586 55.08 2 0.24238192326526573 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 28823 13118 FTDHELQEWY True H1975_Epitope_Rep2 1366.58298108814 1366.58188993586 55.579 2 0.2423366557318031 0.00036105427849320016 0.9438714419765777 ['ENSG00000115756|ENST00000307845|HPCAL1'] 94751 17060 RYLNEFEEL True PC9_epitope_Rep6 1211.5822528121498 1211.5811499358601 78.185 2 0.24233471986394112 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 37920 5657 HEDVRLYTA True H1975_Epitope_Rep2 1102.54072235334 1102.5396299358601 26.757 2 0.24232137624419703 0.00036105427849320016 0.9438714419765777 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENST00000590533.1_1_19:2807573-2808419:+|nuORF', 'ENST00000591149.5_1_19:2807001-2808381:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 8197 13242 ATGSWDSFLK True NCI_RA007_Epitope_Rep1 1110.53457434374 1110.53346993586 55.508 2 0.2422870377607309 0.00036105427849320016 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 40868 6817 HVLVTLGEK True NCI_RA007_Epitope_Rep2 994.58113061334 994.58002993586 31.132 2 0.2422685780664276 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 117130 17881 TYSPALNKMF True PC9_epitope_Rep2 1170.5743309807401 1170.5732299358601 74.081 2 0.24224116603413945 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 95910 10400 SDVEAIFSK True NCI_RA007_Epitope_Rep1 994.49712620586 994.49602993586 44.437 2 0.24223786833360186 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 4367 19015 AIQDKLFQV True PC9_epitope_Rep3 1060.59169529704 1060.5905899358602 78.363 2 0.24221954040357827 0.00036105427849320016 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 86743 20300 QRLETILSL True PC9_epitope_Rep3 1071.62880908175 1071.6277099358601 83.333 2 0.24220969314152282 0.00036105427849320016 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 52716 15718 KQLDDLKVEL True PC9_epitope_Rep3 1199.6761531969898 1199.6745149037902 65.618 3 0.242203176821099 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 117183 13413 TYTDVTPRQF True PC9_epitope_Rep1 1226.59315184902 1226.5920499358601 56.454 2 0.24218364586943483 0.00036105427849320016 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 133222 7963 WEDFKQNTP True H1975_Epitope_Rep2 1163.5247379360299 1163.52364993586 35.577 2 0.24216389699632931 0.00036105427849320016 0.9438714419765777 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 48931 4520 KEYDALKAA True NCI_RA007_Epitope_Rep4 1007.5287606873097 1007.52766993586 23.781 2 0.24216193330190303 0.00036105427849320016 0.9438714419765777 ['ENSG00000108829|ENST00000225972|LRRC59'] 48446 9061 KEEELQAALAR True PC9_epitope_Rep1 1256.67246479888 1256.6708249037902 39.704 3 0.24215027204228173 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH11|p.K1088del|1|0.12|ENSG00000133392|chr16:15737478-15737480|CTT/-|inframe_deletion', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 132452 15378 VYNSEYYHF True PC9_epitope_Rep2 1220.5138388991602 1220.51274993586 64.433 2 0.2421479690546886 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 24766 20511 FAYDGKDYLTL True PC9_epitope_Rep5 1304.6288686513997 1304.6277699358602 83.937 2 0.24214195792835858 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 127398 16129 VQQTVQDLFGR True PC9_epitope_Rep2 1289.67279915205 1289.67170993586 67.297 2 0.24213941338118677 0.00036105427849320016 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 29629 20789 FVLPELPSV True PC9_epitope_Rep6 999.56408356687 999.56298993586 92.733 2 0.24212076544443728 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 35701 8566 GTQSFVFQR True NCI_RA007_Epitope_Rep4 1068.5352430500798 1068.5341499358601 39.733 2 0.24211780720357404 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF'] 137149 12288 YLDPAQQNLY True H1975_Epitope_Rep3 1223.5822528121503 1223.5811499358601 52.444 2 0.24211758941289802 0.00036105427849320016 0.9438714419765777 ['ENST00000421406.1_1_1:247353282-247372753:-|nuORF'] 75149 8114 NNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 975.50591744819 975.50480993586 35.56 2 0.24211266158952258 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 96282 5011 SEETLDEGPPK True H1975_Epitope_Rep3 1200.55101225352 1200.5499099358601 24.4 2 0.24209600243863394 0.00036105427849320016 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 54058 20840 KYLTEGLLQF True PC9_epitope_Rep2 1210.65977485686 1210.6586699358602 85.607 2 0.242089029013309 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 93458 5152 RSDTPLIYK True NCI_RA007_Epitope_Rep5 1091.5975089534697 1091.59640993586 26.512 2 0.2420889120020869 0.00036105427849320016 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 44343 20125 IMLEALERV True PC9_epitope_Rep3 1072.59506642532 1072.59396993586 82.664 2 0.2420827899881832 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 65382 8638 LSERADWQY True H1975_Epitope_Rep1 1166.5356369729 1166.53452993586 38.155 2 0.24207210596207732 0.00036105427849320016 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 2419 5141 AEQLRDEEV True H1975_Epitope_Rep2 1087.51456717515 1087.51346993586 24.852 2 0.24206485899034902 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 14307 10909 DTDEYVLKY True H1975_Epitope_Rep1 1144.52882025696 1144.5277299358602 46.924 2 0.24205084375457375 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1'] 26718 12230 FLDGIYVSEK True NCI_RA007_Epitope_Rep1 1169.59684024713 1169.59574993586 51.541 2 0.2420250588113823 0.00036105427849320016 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 7112 6889 AQYEDIAQKS True PC9_epitope_Rep3 1151.5458673034298 1151.5447699358601 31.513 2 0.24201679170477167 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 6789 12333 AQFEHTILL True NCI_RA007_Epitope_Rep4 1070.5760452329 1070.57494993586 54.437 2 0.24200073587459647 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 28838 12519 FTDLNNYDEY True H1975_Epitope_Rep2 1292.51971212524 1292.51860993586 53.248 2 0.24199594852248874 0.00036105427849320016 0.9438714419765777 ['ENSG00000112902|ENST00000382496|SEMA5A'] 12654 12746 DLEKEAPWEY True H1975_Epitope_Rep2 1278.57683307854 1278.5757299358602 54.13 2 0.24197527035288593 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ABCC4|p.L1261Ffs*59|1|0.26|ENSG00000125257|chr13:95034692-95034693|-/AA|frameshift_variant', 'ENSG00000125257|ENST00000645237|ABCC4'] 69066 11904 LVILEGELER True H1975_Epitope_Rep1 1169.6655885132898 1169.66448993586 50.79 2 0.2419698943737442 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 117028 14057 TYQDIQNTI True PC9_epitope_Rep6 1094.52440358286 1094.5233099358602 65.944 2 0.24196333476078716 0.00036105427849320016 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 41122 19708 HYNSDLNNLLF True PC9_epitope_Rep4 1348.6411646706 1348.64006993586 83.93 2 0.2419488718875924 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 89574 6214 RESEGFEEHVP True H1975_Epitope_Rep2 1314.5840437173 1314.5824049037901 28.872 3 0.24193892464941805 0.00036105427849320016 0.9438714419765777 ['ENSG00000119801|ENST00000261353|YPEL5'] 76122 14677 NRPNLYYEV True PC9_epitope_Rep3 1166.57202248162 1166.57092993586 61.591 2 0.24191729371780626 0.00036105427849320016 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 77215 11624 NYIDKVRFL True NCI_RA007_Epitope_Rep5 1166.64479349906 1166.64313490379 51.363 3 0.24191297333990897 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 24325 7634 FADLSEAANR True NCI_RA007_Epitope_Rep2 1092.5199869087598 1092.5188899358602 34.319 2 0.2419086648251856 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 99689 9910 SLGEISALTSK True H1975_Epitope_Rep3 1104.60265390356 1104.60154993586 43.151 2 0.24190421680499094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 132462 13907 VYNSEYYHF True PC9_epitope_Rep6 1220.5138388991602 1220.51274993586 65.332 2 0.24189202578972532 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 85745 18136 QLVDIIEKV True PC9_epitope_Rep6 1055.62266107215 1055.6215699358602 82.397 2 0.24187874324776756 0.00036105427849320016 0.9438714419765777 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 119791 7485 VEVEGDNRYIA True H1975_Epitope_Rep2 1263.6095301891498 1263.6084299358602 33.74 2 0.24187614787902229 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 94701 8781 RYLEQLHQL True NCI_RA007_Epitope_Rep1 1198.64585612822 1198.64474993586 38.158 2 0.24186568921366422 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 135426 10277 YDSYLGDDYVR True H1975_Epitope_Rep3 1364.5884603913998 1364.5873699358601 44.582 2 0.24186203662127237 0.00036105427849320016 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 33222 15518 GLADNTVIAKV True PC9_epitope_Rep5 1099.62372370131 1099.62262993586 64.7 2 0.2418537587812989 0.00036105427849320016 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 138008 10966 YQAVTATLEEK True PC9_epitope_Rep1 1251.63468230783 1251.63358993586 47.069 2 0.24185160973770883 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 23989 16766 EYPDRIMNTF True PC9_epitope_Rep6 1284.5808729131597 1284.5797699358602 76.982 2 0.24184845863044882 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 68829 12751 LVDTFLEDVK True H1975_Epitope_Rep1 1177.6230549949698 1177.6219499358601 54.107 2 0.24183980923325152 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 30182 19947 FYTVIPHNF True PC9_epitope_Rep5 1136.5654805492 1136.5643899358602 81.781 2 0.24183250790892263 0.00036105427849320016 0.9438714419765777 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 54301 16862 KYPSPFFVF True NCI_RA007_Epitope_Rep4 1130.5800679841798 1130.5789699358602 73.069 2 0.24182643424462952 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 64307 21565 LQMEPAAFQAL True PC9_epitope_Rep3 1217.61144476545 1217.61034993586 88.245 2 0.2418189975064372 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 83035 16997 PYLDKFFTL True NCI_RA007_Epitope_Rep4 1142.6011973515801 1142.60010993586 73.657 2 0.24181601703585628 0.00036105427849320016 0.9438714419765777 ['ENSG00000130158|ENST00000294618|DOCK6'] 9780 15038 AYLESFYKF True NCI_RA007_Epitope_Rep2 1166.5648118428599 1166.56370993586 63.18 2 0.2417998419927791 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 87426 13934 QTEEDYTLTMY True H1975_Epitope_Rep2 1392.5755127492 1392.57440993586 58.746 2 0.24178993117508835 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166206|P28472-3|GABRB3'] 74850 8870 NLQEVLGEEK True H1975_Epitope_Rep1 1157.5928174958497 1157.59172993586 39.031 2 0.2417570008146322 0.00036105427849320016 0.9438714419765777 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF'] 70969 5279 M[Oxidation]EQELAHAV True H1975_Epitope_Rep2 1042.4753455958999 1042.4742499358601 25.366 2 0.24175683827289582 0.00036105427849320016 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 108722 5634 TEMNGRIVAT True H1975_Epitope_Rep2 1090.5440934816197 1090.54298993586 26.671 2 0.24175276595066114 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 112368 11081 TNAENEFVTIK True PC9_epitope_Rep6 1264.6299312805597 1264.62882993586 53.543 2 0.24174985264018742 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 74979 20140 NLVRELLAV True PC9_epitope_Rep4 1025.6233297784897 1025.62222993586 85.604 2 0.24173887435962235 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 67113 10991 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.5811499358601 47.241 2 0.24171362057173146 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 69702 18311 LVYPEELKPVL True PC9_epitope_Rep6 1298.74858986126 1298.7474899358601 83.076 2 0.24171251821792297 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 118212 14669 VAYEEFEKV True PC9_epitope_Rep2 1112.5389910178399 1112.5378899358602 61.69 2 0.24170209561515774 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 22192 12029 ETDEKDFYLY True H1975_Epitope_Rep3 1321.5714133449299 1321.57030993586 51.43 2 0.241667816430263 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 95028 7692 RYQTQPVTL True NCI_RA007_Epitope_Rep4 1104.5927579261997 1104.5916699358602 36.25 2 0.24166212749006483 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 31653 6597 GEHSYTGIIHA True H1975_Epitope_Rep2 1183.56218607391 1183.56055490379 30.286 3 0.24165573173304078 0.00036105427849320016 0.9438714419765777 ['ENSG00000122912|ENST00000609923|SLC25A16'] 109704 17696 THFIQAGLLSA True PC9_epitope_Rep4 1156.62405805448 1156.62296993586 76.093 2 0.24165416444568638 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 77264 19779 NYIPRFWTF True PC9_epitope_Rep6 1242.6185787512197 1242.61748993586 88.737 2 0.24162516504902753 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 40817 16316 HVLDDFVKV True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 68.005 2 0.24162171521013331 0.00036105427849320016 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 53723 14721 KYEELFPAF True NCI_RA007_Epitope_Rep3 1142.5648118428596 1142.56370993586 65.308 2 0.2416134826593819 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 119001 5551 VEFM[Oxidation]DDTSR True NCI_RA007_Epitope_Rep2 1114.46008945458 1114.45898993586 26.208 2 0.24160985335528787 0.00036105427849320016 0.9438714419765777 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 26152 18208 FHNELLTQL True PC9_epitope_Rep4 1113.5818588893299 1113.5807699358602 78.105 2 0.24159782557349269 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 9750 12339 AYLEAIHNF True NCI_RA007_Epitope_Rep1 1076.52909504048 1076.5279899358602 51.968 2 0.24156422645754577 0.00036105427849320016 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 84860 12196 QHQLIQEAL True PC9_epitope_Rep4 1078.5771078620598 1078.5760099358602 54.73 2 0.24154381476424433 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ACTN4|p.Q709H|1|0.35|ENSG00000130402|chr19:38725840-38725840|G/T|missense_variant'] 79086 20854 PFVDHVFTF True PC9_epitope_Rep2 1107.53893144819 1107.5378299358601 85.66 2 0.2415421067500636 0.00036105427849320016 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 27672 15932 FQDENHLYL True PC9_epitope_Rep2 1177.54038800017 1177.53928993586 66.531 2 0.24153202241641092 0.00036105427849320016 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 53870 19127 KYIDFDHVF True PC9_epitope_Rep2 1182.57095985246 1182.5693249037902 78.942 3 0.24151986489106855 0.00036105427849320016 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 135823 8877 YEQELKDLAA True H1975_Epitope_Rep3 1178.5819184589798 1178.58082993586 39.146 2 0.2415083419358636 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 83256 8772 QADTTRLEL True NCI_RA007_Epitope_Rep2 1045.54038800017 1045.53928993586 38.768 2 0.24150704412704765 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 28710 12119 FSVEGQLEFR True H1975_Epitope_Rep1 1210.5982372294598 1210.5971499358602 51.631 2 0.2414966746401794 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 42160 11574 IEFASFEDAK True NCI_RA007_Epitope_Rep2 1155.5448046742697 1155.54370993586 49.61 2 0.2414957927777273 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 136362 7347 YHDEADQSAL True PC9_epitope_Rep5 1147.47818166643 1147.47708993586 33.219 2 0.24149304545371084 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 105985 21018 SVLKELLQV True PC9_epitope_Rep3 1027.6277464525897 1027.62664993586 86.123 2 0.24147764512094555 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2'] 118224 14880 VAYKFPELL True H1975_Epitope_Rep2 1078.60628273202 1078.6051899358602 62.389 2 0.2414772839853739 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-3|UBR2'] 85381 8368 QLEDGRTLSDY True H1975_Epitope_Rep2 1295.59935942827 1295.5982699358601 37.141 2 0.2414570085637822 0.00036105427849320016 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 104985 8589 STIEYVIQR True NCI_RA007_Epitope_Rep3 1107.59242357303 1107.5913299358601 40.855 2 0.24145117090744625 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 9778 15446 AYLEAYKEF True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 71.569 2 0.24143557295043866 0.00036105427849320016 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 2305 5300 AEQAERYDDM True H1975_Epitope_Rep3 1226.48736645114 1226.48626993586 25.465 2 0.24142152530496172 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 129663 16314 VTIEDVQKL True PC9_epitope_Rep1 1043.58627556343 1043.5851699358602 67.57 2 0.24141192891757374 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 139016 14894 YSHDGAFLAV True PC9_epitope_Rep4 1078.5083595959 1078.5072699358602 65.23 2 0.24137636925372097 0.00036105427849320016 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 86733 9826 QRLAEPSQL True PC9_epitope_Rep5 1040.56145779792 1040.56036993586 42.763 2 0.24135291778568757 0.00036105427849320016 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 112527 8654 TPAEVGVLVGK True H1975_Epitope_Rep1 1068.6179100448796 1068.6168099358601 38.217 2 0.24132031887112237 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 92186 12934 RQFSTPFQL True NCI_RA007_Epitope_Rep5 1122.5821932425 1122.58108993586 56.432 2 0.24131761596899823 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 133276 9169 WEIENNPTVKA True H1975_Epitope_Rep1 1299.6459156978701 1299.6448099358602 40.173 2 0.24131036207881668 0.00036105427849320016 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 47341 14313 IYHDLEQSI True PC9_epitope_Rep5 1116.54513902744 1116.5440499358601 60.058 2 0.24130223126667916 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100266|Q9UNF0-2|PACSIN2', 'ENSG00000100266|ENST00000263246|PACSIN2'] 28184 18801 FRPEWQSVY True PC9_epitope_Rep3 1210.57710786206 1210.5760099358602 77.543 2 0.24129584091976775 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2', 'ENST00000512755.1_1_13:33101488-33110480:-|nuORF'] 137563 5066 YLSEVASGDNK True H1975_Epitope_Rep3 1181.5564319871298 1181.55532993586 24.608 2 0.24127513693326103 0.00036105427849320016 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF'] 61131 7330 LLDEHHISY True H1975_Epitope_Rep1 1125.54547338061 1125.54436993586 33.204 2 0.2412679344834079 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 72830 16373 NALDKVLSV True PC9_epitope_Rep6 957.54949613189 957.54838993586 75.365 2 0.24126691919360171 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8', 'NARS2-ALG8|2|fusion', 'NARS2-ALG8|1|fusion', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 17504 19663 EHIGIGLLSL True PC9_epitope_Rep6 1050.60734536118 1050.6062499358602 88.292 2 0.24126626797502823 0.00036105427849320016 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 2863 10756 AEYDRPNLLP True H1975_Epitope_Rep3 1186.59823722946 1186.5971499358602 46.451 2 0.2412473049431273 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 53206 11409 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep3 1213.59004099497 1213.58894993586 49.001 2 0.2412391210261687 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 70114 14238 LYIVHPTMF True NCI_RA007_Epitope_Rep4 1119.57868808519 1119.57758993586 62.048 2 0.2412302959621226 0.00036105427849320016 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 12796 12956 DLINNLGTIAK True H1975_Epitope_Rep1 1170.66083748602 1170.6597499358602 54.91 2 0.2412255980378663 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 27034 21914 FLMDFIHQV True PC9_epitope_Rep1 1148.56885167748 1148.56774993586 89.108 2 0.24121985054072906 0.00036105427849320016 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 70078 19754 LYIGWDKHYGF True PC9_epitope_Rep2 1397.67682190333 1397.6751749037899 81.371 3 0.24121349177483567 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 101781 11710 SPIENIQRV True PC9_epitope_Rep1 1054.57710786206 1054.5760099358602 49.917 2 0.24119761705860646 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 76314 4647 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 22.973 2 0.24119198760809207 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 89176 10427 REIDDYIVQA True H1975_Epitope_Rep3 1220.6037165327198 1220.60260993586 45.167 2 0.24118491188894917 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 53574 5776 KVTEGSFVYK True NCI_RA007_Epitope_Rep4 1156.61282466444 1156.61116490379 28.838 3 0.24118332602196785 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 43119 9692 IGNLNTLVVK True H1975_Epitope_Rep1 1069.64954452633 1069.64844993586 42.205 2 0.24118229940052932 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 73339 8036 NELTEFAK True H1975_Epitope_Rep3 950.4709114580199 950.46980993586 35.883 2 0.2411765640068674 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 94838 21375 RYMDQWVPVI True PC9_epitope_Rep5 1305.65397828377 1305.65288993586 87.28 2 0.24116661733120415 0.00036105427849320016 0.9438714419765777 ['ENSG00000116717|ENST00000370986|GADD45A', 'nc|ENSG00000116717|P24522-2|GADD45A'] 19974 9961 EMEAELEDER True PC9_epitope_Rep5 1249.5132468458098 1249.5121499358602 43.29 2 0.24114241324087685 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 108723 5732 TEMNGRIVAT True H1975_Epitope_Rep2 1090.5440934816197 1090.54298993586 27.046 2 0.2411347945969856 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 105182 3844 STNPFRPQK True NCI_RA007_Epitope_Rep4 1073.56179215109 1073.5606899358602 20.986 2 0.24112981557755478 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133136|A0A804HLA8|GNG5B', 'ENSG00000174021|ENST00000370645|GNG5'] 138286 13262 YQYPRPLLI True H1975_Epitope_Rep3 1161.6546299067697 1161.6535299358602 56.27 2 0.2411145263112183 0.00036105427849320016 0.9438714419765777 ['ENSG00000160991|ENST00000495936|ORAI2'] 48576 10076 KEIDAYIVQA True H1975_Epitope_Rep3 1148.607739284 1148.60664993586 43.796 2 0.2411120662075059 0.00036105427849320016 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF'] 132956 16508 VYTYIQSRF True PC9_epitope_Rep1 1175.5975089534697 1175.59640993586 68.322 2 0.24110836489044168 0.00036105427849320016 0.9438714419765777 ['DYRK4|p.R355Kfs*16|1|0.21|ENSG00000010219|chr12:4610195-4610196|-/A|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 114842 12135 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.4974899358601 51.761 2 0.24109493440740465 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 77529 7185 NYQNVVHKL True PC9_epitope_Rep2 1113.59309227937 1113.59198993586 33.027 2 0.24107188119429895 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4', 'ZMYM4|p.P896Lfs*7|1|0.34|ENSG00000146463|chr1:35392308-35392308|C/-|frameshift_variant'] 116698 20739 TYKDYVDLF True PC9_epitope_Rep1 1162.55464108198 1162.55354993586 84.599 2 0.24106901493067934 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 112367 12998 TNAENEFVTIK True PC9_epitope_Rep5 1264.6299312805597 1264.62882993586 55.006 2 0.24105933508056626 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 61287 9323 LLDTPVKTQY True H1975_Epitope_Rep2 1176.63903941228 1176.6379499358602 40.821 2 0.24105816303276684 0.00036105427849320016 0.9438714419765777 ['ENSG00000168769|ENST00000380013|TET2', 'nc|ENSG00000168769|Q6N021-2|TET2', 'nc|ENSG00000168769|Q6N021-3|TET2'] 59157 6309 LGEYEDVSR True NCI_RA007_Epitope_Rep2 1066.49310345458 1066.49200993586 29.146 2 0.24105031967246393 0.00036105427849320016 0.9438714419765777 ['ENST00000589308.1_1_19:36606815-36612715:+|nuORF', 'nc|ENSG00000105254|Q99426-2|TBCB', 'ENST00000392178.8_1_19:36606435-36612715:+|nuORF', 'ENSG00000105254|ENST00000221855|TBCB'] 106966 18193 SYLEKQVVTF True PC9_epitope_Rep1 1212.6390394122798 1212.6379499358602 74.77 2 0.2410440224051046 0.00036105427849320016 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 14274 5286 DSYVGDEAQSK True PC9_epitope_Rep5 1197.51496109797 1197.5138699358602 25.348 2 0.24101674287566127 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 132362 20992 VYMDWYEKF True PC9_epitope_Rep3 1279.5583465634297 1279.55724993586 86.023 2 0.24101408585930148 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 109938 7791 THSDIQVKL True PC9_epitope_Rep2 1039.56620882519 1039.5651099358602 35.34 2 0.24099290654660366 0.00036105427849320016 0.9438714419765777 ['ENSG00000105223|ENST00000409735|PLD3', 'EGLN2-PLD3|1|fusion'] 102455 10358 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep3 1225.56488887629 1225.56378993586 44.897 2 0.24098839476732808 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 22240 10588 ETDNNIVVY True H1975_Epitope_Rep1 1065.4978544818498 1065.4967499358602 45.68 2 0.24098119234234036 0.00036105427849320016 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 69211 11321 LVNELTEFAK True H1975_Epitope_Rep3 1162.6233893481399 1162.6222899358602 48.654 2 0.24094612996559472 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 109651 6007 THDQAVQAL True PC9_epitope_Rep2 981.4879585044899 981.48686993586 28.494 2 0.24093735424843116 0.00036105427849320016 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 27663 18910 FQDDRYLYM True PC9_epitope_Rep1 1249.54375912845 1249.5426699358602 77.523 2 0.24093537457753333 0.00036105427849320016 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000582445.1_1_18:18625251-18629157:-|nuORF', 'ENSG00000134318|ENST00000315872|ROCK2'] 39157 4101 HLENNPALEK True NCI_RA007_Epitope_Rep2 1163.5934862021898 1163.5923899358602 20.591 2 0.24092770252172885 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 23585 19823 EYDNFFQHL True PC9_epitope_Rep4 1211.5247379360299 1211.52364993586 84.377 2 0.24092097722440084 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 61534 17088 LLGELLQDNAK True PC9_epitope_Rep2 1212.67140216972 1212.6703099358601 70.979 2 0.2409067764182314 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 47536 23153 IYLPYLQNW True PC9_epitope_Rep2 1208.6229954253201 1208.62188993586 94.543 2 0.24090530909777957 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 114845 12027 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.4974899358601 51.422 2 0.24090403663511836 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 65121 9803 LSDPQERAWY True H1975_Epitope_Rep2 1263.58840082175 1263.58730993586 42.693 2 0.2408976461156395 0.00036105427849320016 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 63314 8672 LPDGYEFK True H1975_Epitope_Rep1 967.4650978015899 967.46400993586 38.286 2 0.24089164768645946 0.00036105427849320016 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF', 'LGALS1|p.K100R|1|0.22|ENSG00000100097|chr22:37679640-37679640|A/G|missense_variant'] 67089 7300 LTDADAMKY True H1975_Epitope_Rep2 1026.46919720586 1026.46808993586 33.017 2 0.24086052711148434 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A'] 183 9800 AAENEFVVLK True H1975_Epitope_Rep1 1118.5971746003 1118.5960699358602 42.624 2 0.2408499501999093 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF', 'CON__Q6IME9'] 117062 20373 TYQRWQFTL True PC9_epitope_Rep3 1241.61930702721 1241.61820993586 83.615 2 0.24084753546147938 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 140297 13648 YYDKHFTEF True PC9_epitope_Rep5 1248.54513902744 1248.5440499358601 57.521 2 0.24083405162010157 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 133021 15953 VYVQHPITF True PC9_epitope_Rep5 1102.5811306133398 1102.58002993586 66.352 2 0.24083107190535055 0.00036105427849320016 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 72233 11278 MRYNEKELQAL True PC9_epitope_Rep4 1393.70238502817 1393.70074490379 51.158 3 0.2408299453898425 0.00036105427849320016 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 101812 12840 SPIENIQRVAA True PC9_epitope_Rep2 1196.6513354314802 1196.6502299358601 54.69 2 0.2408251407440751 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 12795 12863 DLINNLGTIAK True H1975_Epitope_Rep1 1170.66083748602 1170.6597499358602 54.546 2 0.24080617117129963 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 138861 4940 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 24.129 2 0.24079913702721054 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 8306 17512 ATLKELTSL True PC9_epitope_Rep5 974.56481184286 974.56370993586 72.365 2 0.24078913513574535 0.00036105427849320016 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 87747 20628 QVFPGLLERV True PC9_epitope_Rep1 1156.6604435631998 1156.65934993586 84.164 2 0.2407845128919553 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 21846 10388 ESEDPDYYQY True H1975_Epitope_Rep1 1307.48299226335 1307.4818899358602 44.906 2 0.2407640334748318 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 14624 8599 DVLLQVDDERR True NCI_RA007_Epitope_Rep2 1356.69974217588 1356.69808490379 38.093 3 0.24075697145387331 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 22779 6827 EVDEDFDSK True PC9_epitope_Rep5 1082.44039917538 1082.4393099358601 31.232 2 0.2407444860507634 0.00036105427849320016 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2'] 139273 12343 YTDHLQSYVIY True H1975_Epitope_Rep3 1400.6612314088402 1400.6601299358601 52.662 2 0.2407239950109835 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENSG00000090989|ENST00000381295|EXOC1', 'ENST00000511971.5_1_4:56749994-56766742:+|nuORF'] 89408 11625 RENEITGALLP True NCI_RA007_Epitope_Rep5 1211.6510010783097 1211.64990993586 51.367 2 0.24071450642120318 0.00036105427849320016 0.9438714419765777 ['ENSG00000101347|ENST00000646673|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1'] 14752 8306 DVVQAYPEVR True H1975_Epitope_Rep1 1174.5982372294598 1174.5971499358602 36.881 2 0.24071426602706866 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant'] 111089 13127 TLEEDEEELFK True NCI_RA007_Epitope_Rep2 1380.6296564970396 1380.62854993586 55.692 2 0.24070749406257927 0.00036105427849320016 0.9438714419765777 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF'] 77368 18970 NYLPQISHL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 77.751 2 0.24070718028764734 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ADCK1|p.N489Gfs*12|1|0.28|ENSG00000063761|chr14:77933283-77933289|CAACTTA/-|frameshift_variant', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 67498 13084 LTELMFEHY True H1975_Epitope_Rep1 1181.54269649929 1181.5415899358602 55.416 2 0.24067440718303584 0.00036105427849320016 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 2323 7485 AEQDELSQRLA True H1975_Epitope_Rep1 1258.61534384558 1258.61424993586 33.787 2 0.24065844665186947 0.00036105427849320016 0.9438714419765777 ['ENSG00000255112|ENST00000526991|CHMP1B'] 81767 4316 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 21.718 3 0.2406240713410159 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 29626 21959 FVLPELPSV True PC9_epitope_Rep4 999.56408356687 999.56298993586 92.679 2 0.2406062937680554 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 28944 12957 FTEQWTDGY True H1975_Epitope_Rep3 1145.4665543535698 1145.46544993586 55.07 2 0.2406005974790007 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 132280 19657 VYLDKFIRL True PC9_epitope_Rep2 1165.68593003505 1165.68482993586 80.995 2 0.24059173627669772 0.00036105427849320016 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 138846 4550 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 22.61 2 0.2405876707939176 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 84864 10784 QHQSGIVQL True PC9_epitope_Rep1 1008.5352430500798 1008.53414993586 46.369 2 0.24057032863757946 0.00036105427849320016 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 89854 20106 RFLNDPGHLLW True PC9_epitope_Rep2 1366.7146043943799 1366.71295490379 82.747 3 0.24056956186733552 0.00036105427849320016 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 88313 8593 QYLEQSSKL True PC9_epitope_Rep4 1094.56078909158 1094.5596899358602 40.533 2 0.24056323980911168 0.00036105427849320016 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 45021 10983 IQLVEEELDR True NCI_RA007_Epitope_Rep2 1242.6455813446998 1242.64448993586 47.329 2 0.24055172898875082 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 98034 10127 [Acetylation]-SHTILLVQPTK True H1975_Epitope_Rep1 1277.7343370957499 1277.7332299358602 43.89 2 0.24052761640415432 0.00036105427849320016 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 76069 15695 NRLTEMETL True PC9_epitope_Rep5 1105.5437591284501 1105.5426699358602 65.379 2 0.24050489266764222 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 35189 9366 GSDQAIITLR True NCI_RA007_Epitope_Rep2 1072.58767254576 1072.58656993586 41.041 2 0.24050480741044017 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 23871 19073 EYMEHVYLI True PC9_epitope_Rep4 1195.5583465634297 1195.55724993586 81.455 2 0.24049956005261539 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 84062 9382 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 41.05 2 0.24047900208962456 0.00036105427849320016 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 113668 14275 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61225490379 62.811 3 0.24047479965005125 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 123620 9527 VILEGELER True NCI_RA007_Epitope_Rep1 1056.5815245361598 1056.5804299358601 41.054 2 0.24047281900432968 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'TPM2|p.E180K|1|0.36|ENSG00000198467|chr9:35685294-35685294|C/T|missense_variant', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 8046 10593 ATDWGDTQAY True H1975_Epitope_Rep2 1126.4567179458597 1126.45562993586 45.768 2 0.24047118270522005 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 91138 16047 RLPDIPLRQV True PC9_epitope_Rep1 1205.72444080209 1205.72278490379 66.539 3 0.24046365442813308 0.00036105427849320016 0.9438714419765777 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF'] 39965 12557 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5439899358599 53.607 2 0.24045232965103108 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 106165 11128 SVPEFPLSPPK True NCI_RA007_Epitope_Rep3 1196.6441247927198 1196.64302993586 50.875 2 0.24044686687394662 0.00036105427849320016 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 10052 9174 AYVHMVTHF True NCI_RA007_Epitope_Rep1 1103.52223583823 1103.52112993586 39.685 2 0.24043599763440665 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 83080 20079 PYMDSPQSIGF True PC9_epitope_Rep4 1240.5434247752798 1240.5423299358602 85.366 2 0.2404278573674808 0.00036105427849320016 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 108374 8380 TEDQFIRTP True H1975_Epitope_Rep2 1105.54038800017 1105.53928993586 37.186 2 0.24042409490342867 0.00036105427849320016 0.9438714419765777 ['ENSG00000062822|ENST00000440232|POLD1'] 136378 16709 YHDINVYSL True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 72.24 2 0.24042358593103788 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 21361 14489 ERLQIDEQL True PC9_epitope_Rep2 1142.5931518490197 1142.5920499358601 61.002 2 0.24041680209037258 0.00036105427849320016 0.9438714419765777 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF', 'ENST00000492846.1_1_X:147022154-147024854:+|nuORF', 'TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1'] 91290 20687 RLYDGLFKVI True PC9_epitope_Rep5 1222.70739375562 1222.70628993586 84.628 2 0.24041565200066228 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 40499 7832 HSEYHTLLY True H1975_Epitope_Rep1 1161.54547338061 1161.54436993586 35.077 2 0.24041155429761923 0.00036105427849320016 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5'] 132979 19757 VYVDLGGSHVF True PC9_epitope_Rep5 1191.5924235730301 1191.5913299358601 81.038 2 0.2404011203138187 0.00036105427849320016 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 140472 20470 YYIDKLEYL True PC9_epitope_Rep3 1218.6172413385398 1218.6161499358602 83.996 2 0.2403987143939222 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000484741.1_1_10:5496419-5498268:+|nuORF'] 96730 9014 SEQFTAM[Oxidation]FR True NCI_RA007_Epitope_Rep1 1131.5018946969099 1131.5007899358602 39.064 2 0.2403815326654522 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 137154 9488 YLDPNQRDLY True H1975_Epitope_Rep3 1295.61461556959 1295.61350993586 41.5 2 0.24036193150172286 0.00036105427849320016 0.9438714419765777 ['ENSG00000189144|ENST00000536220|ZNF573'] 8621 15831 AVALERTFVGA True PC9_epitope_Rep5 1132.62405805448 1132.62296993586 65.885 2 0.2403505437520842 0.00036105427849320016 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN'] 7119 5223 AQYEEIAQR True NCI_RA007_Epitope_Rep3 1106.5356369728997 1106.53452993586 27.546 2 0.2403386649961379 0.00036105427849320016 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6C|p.R349Q|1|0.16|ENSG00000170465|chr12:52471163-52471163|C/T|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 107153 17379 SYNDYVREF True PC9_epitope_Rep5 1191.51965255559 1191.5185499358602 71.849 2 0.2403351878545905 0.00036105427849320016 0.9438714419765777 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1'] 14351 8381 DTDYRSMEY True H1975_Epitope_Rep2 1178.4550036936998 1178.45390993586 37.191 2 0.2403330884592915 0.00036105427849320016 0.9438714419765777 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 135560 6903 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 31.472 2 0.24032625275269195 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 103006 21018 SQITPHAIIFL True PC9_epitope_Rep1 1238.7023083751799 1238.70120993586 85.674 2 0.24032050715825012 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 36660 15482 GVLQLGNIVFK True NCI_RA007_Epitope_Rep5 1186.70739375562 1186.70628993586 66.247 2 0.24031048161684343 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 48562 6559 KEHEEFQITA True H1975_Epitope_Rep2 1230.5880664685799 1230.58642490379 30.141 3 0.24029803651023843 0.00036105427849320016 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 104713 9973 STDGKHWWEY True H1975_Epitope_Rep1 1307.5571006934701 1307.5560099358602 43.297 2 0.2402840947952142 0.00036105427849320016 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1', 'RAB3GAP1-CCNT2|2|fusion', 'nc|ENSG00000082258|O60583-2|CCNT2'] 113760 6321 TRDPQFQKL True PC9_epitope_Rep2 1131.6036569630699 1131.6020249037902 29.711 3 0.24028379682948425 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 7983 4488 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 22.376 2 0.2402836983386367 0.00036105427849320016 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 14326 17194 DTDIVDEAIYY True H1975_Epitope_Rep1 1315.58197802863 1315.5808899358601 71.592 2 0.24027541888735654 0.00036105427849320016 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 109957 8057 THSLETQEL True PC9_epitope_Rep2 1056.5087535187201 1056.5076499358602 36.351 2 0.24027201908506396 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 137196 8227 YLDYHMEKY True H1975_Epitope_Rep1 1260.5485101557201 1260.54740993586 36.588 2 0.2402667373964255 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 132743 18537 VYSKDNPNLLF True PC9_epitope_Rep3 1308.67140216972 1308.6703099358601 76.523 2 0.2402667140007933 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 132038 6525 VYHHLVETL True NCI_RA007_Epitope_Rep3 1109.58694426977 1109.58584993586 32.707 2 0.24023707217402815 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000099998|P36269-2|GGT5', 'ENSG00000099998|ENST00000327365|GGT5', 'nc|ENSG00000099998|P36269-3|GGT5'] 46484 19122 ITPDEFHFV True PC9_epitope_Rep4 1103.5287606873098 1103.52766993586 81.646 2 0.24023112103562186 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF', 'nc|ENSG00000153827|Q14669-4|TRIP12'] 47620 13760 IYPELQIERF True NCI_RA007_Epitope_Rep3 1306.6921376142998 1306.69104993586 61.45 2 0.24022139579957622 0.00036105427849320016 0.9438714419765777 ['ENSG00000077420|ENST00000376236|APBB1IP', 'APBB1IP|p.F234L|1|0.35|ENSG00000077420|chr10:26513549-26513549|T/G|missense_variant'] 9936 20624 AYQHLFYLL True PC9_epitope_Rep4 1166.6124307416198 1166.61132993586 87.486 2 0.24021230353914313 0.00036105427849320016 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 140619 20772 YYNPHLLLNTL True PC9_epitope_Rep1 1359.7186867153098 1359.7175899358601 84.727 2 0.2402063721317979 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 39115 8917 HLDEAQRLLY True H1975_Epitope_Rep3 1256.65133543148 1256.6502299358601 39.299 2 0.24018367077062658 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000256060|Q8IVP9-2|ZNF547', 'ENSG00000152433|ENST00000282282|ZNF547', 'ENST00000600421.1_1_19:57901368-57922291:+|nuORF', 'nc|ENSG00000188785|Q8NEK5|ZNF548', 'ENSG00000188785|ENST00000336128|ZNF548'] 47820 15010 IYSIDFTRF True NCI_RA007_Epitope_Rep3 1160.5866099165999 1160.58550993586 66.505 2 0.2401822470642059 0.00036105427849320016 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B'] 54304 17085 KYPSPFFVF True NCI_RA007_Epitope_Rep5 1130.5800679841798 1130.5789699358602 72.485 2 0.240178429546836 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 93673 12409 RTIFPLFMK True NCI_RA007_Epitope_Rep3 1151.6525217317899 1151.65142993586 56.019 2 0.24016613317801314 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1', 'ENST00000473857.5_1_20:36384780-36460672:+|nuORF', 'nc|ENSG00000132792|Q8WYA6-3|CTNNBL1', 'nc|ENSG00000132792|Q8WYA6-2|CTNNBL1'] 45118 17749 IQTAVRLLL True PC9_epitope_Rep6 1025.6597152872098 1025.65860993586 80.906 2 0.24015720548295005 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC4|p.R93G|1|0.26|ENSG00000278588|chr6:26123628-26123628|T/C|missense_variant', 'H2BC4|p.E94D|1|0.3|ENSG00000278588|chr6:26123623-26123623|C/A|missense_variant', 'H2BC7|p.E94D|1|0.38|ENSG00000277224|chr6:26199840-26199840|G/C|missense_variant', 'H2BC21|p.P104L|1|0.5|ENSG00000184678|chr1:149886330-149886330|G/A|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 97718 4649 SHEGETAYIR True PC9_epitope_Rep5 1161.54145062933 1161.5398049037901 22.939 3 0.2401516511817129 0.00036105427849320016 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.R181G|1|0.17|ENSG00000136450|chr17:58005812-58005812|T/C|missense_variant'] 59734 5505 LGVIEDHSNR True PC9_epitope_Rep3 1138.5730851107799 1138.57144490379 26.25 3 0.24014852412114296 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 113754 7677 TRDPQFQKL True PC9_epitope_Rep1 1131.6036569630699 1131.6020249037902 34.351 3 0.24014562536280293 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 17550 18079 EHIQNIMTL True PC9_epitope_Rep1 1097.55392988933 1097.55282993586 74.334 2 0.24012765448503587 0.00036105427849320016 0.9438714419765777 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 133014 16124 VYVQHPITF True PC9_epitope_Rep1 1102.5811306133398 1102.58002993586 66.836 2 0.24012253984533383 0.00036105427849320016 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 24479 22658 FAIDPHLLLSV True PC9_epitope_Rep5 1223.69140933831 1223.6903099358601 92.155 2 0.24010402986722923 0.00036105427849320016 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 94890 5820 RYPDNLKHL True PC9_epitope_Rep2 1154.61964138038 1154.61799490379 27.78 3 0.24010104629193776 0.00036105427849320016 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 94695 8333 RYLENGKETL True PC9_epitope_Rep3 1221.6353510141698 1221.6337049037902 37.025 3 0.24009789857138483 0.00036105427849320016 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 58385 11690 LEVNEAELLR True NCI_RA007_Epitope_Rep1 1184.6401020414398 1184.63900993586 49.447 2 0.24009704940716078 0.00036105427849320016 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1'] 135096 9688 YALYDATYETK True NCI_RA007_Epitope_Rep5 1336.61869789052 1336.6176099358602 43.901 2 0.24005128185167182 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 95840 4586 [Acetylation]-SDKPDM[Oxidation]AEIEK True H1975_Epitope_Rep3 1319.5914978632497 1319.59038993586 22.761 2 0.24004474263936862 0.00036105427849320016 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 9736 20519 AYKYIQELW True PC9_epitope_Rep5 1212.6179100448796 1212.6168099358601 83.969 2 0.24000313834566597 0.00036105427849320016 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 67121 11434 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 49.033 2 0.24000088537100803 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 47754 7519 IYQRDPLKL True NCI_RA007_Epitope_Rep3 1144.6604435631998 1144.65934993586 36.699 2 0.23999441667311952 0.00036105427849320016 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 821 7206 ADDADEFGYSR True H1975_Epitope_Rep1 1244.4945600065598 1244.49346993586 32.73 2 0.23997850561753128 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 36437 13025 GVIGQDGLLFK True NCI_RA007_Epitope_Rep4 1145.6444591458899 1145.6433699358602 57.204 2 0.23997087163540268 0.00036105427849320016 0.9438714419765777 ['ENSG00000107371|ENST00000327304|EXOSC3', 'ENST00000465860.5_1_9:37781981-37784738:-|nuORF'] 100324 9592 SLMHSFILK True NCI_RA007_Epitope_Rep3 1074.5895871220598 1074.58848993586 44.816 2 0.23995980055834074 0.00036105427849320016 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 11052 7740 DDNM[Oxidation]FQIGK True H1975_Epitope_Rep3 1082.47026021546 1082.46916993586 34.754 2 0.23995624971291826 0.00036105427849320016 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 73019 14341 NDEELNKLLGK True PC9_epitope_Rep3 1271.6721304457099 1271.6710299358601 60.248 2 0.2399512917240291 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 18129 6485 EIM[Oxidation]DAAEDYAK True H1975_Epitope_Rep1 1270.5387336981 1270.5376299358602 30.006 2 0.2399494469161194 0.00036105427849320016 0.9438714419765777 ['ENSG00000115866|ENST00000264161|DARS1'] 48905 7323 KEVEQFTQVA True H1975_Epitope_Rep2 1177.5979028762902 1177.5968099358602 33.108 2 0.23993049756900148 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 132698 19615 VYSEAARVLQF True PC9_epitope_Rep5 1281.67173652289 1281.67062993586 80.501 2 0.2399222388392449 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 101782 10742 SPIENIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 46.637 2 0.2399174857164346 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 14813 15350 DYAYLREHF True PC9_epitope_Rep4 1212.5563724174797 1212.55526993586 66.976 2 0.23990742479565946 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 45019 10556 IQLVEEELDR True H1975_Epitope_Rep3 1242.6455813446998 1242.64448993586 45.67 2 0.2399069908484227 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 48846 8936 KESDIYIVA True NCI_RA007_Epitope_Rep3 1036.54407639828 1036.5429699358601 42.235 2 0.2399069719288164 0.00036105427849320016 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 83600 4908 QDVDNASLAR True NCI_RA007_Epitope_Rep1 1087.52580056519 1087.52470993586 23.17 2 0.23990694422605233 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 84234 4793 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 23.526 2 0.2398936417674277 0.00036105427849320016 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 112386 5950 TNEAQAIETAR True NCI_RA007_Epitope_Rep1 1202.58912909774 1202.58802993586 27.191 2 0.2398931663640733 0.00036105427849320016 0.9438714419765777 ['ENSG00000177889|ENST00000318066|UBE2N', 'nc|ENSG00000276380|Q5JXB2|UBE2NL'] 21310 14865 ERISLQQEL True PC9_epitope_Rep5 1114.59823722946 1114.5971499358602 62.181 2 0.2398917004592056 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 22579 9652 ETNLFETEETR True NCI_RA007_Epitope_Rep1 1367.6204887956699 1367.61938993586 41.542 2 0.23989044515594285 0.00036105427849320016 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 116513 18394 TYDYNFHSF True PC9_epitope_Rep1 1192.48253877088 1192.4814499358602 75.543 2 0.23988439847376627 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 47898 21294 IYVHDLLTF True PC9_epitope_Rep5 1119.59644632431 1119.5953499358602 86.959 2 0.23988358274809854 0.00036105427849320016 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 13727 13569 DQIYDIFQK True H1975_Epitope_Rep1 1168.5764391557198 1168.57534993586 57.319 2 0.23987862530677653 0.00036105427849320016 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 24253 21221 EYYRGFTLF True PC9_epitope_Rep3 1194.5709598524597 1194.5698699358602 86.915 2 0.2398730902783536 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 37450 21186 GWYDEEHPLVF True PC9_epitope_Rep2 1390.6193665968601 1390.61826993586 86.947 2 0.23986455330837278 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 131710 22711 VWSDVTPLTF True PC9_epitope_Rep5 1163.58627556343 1163.5851699358602 92.363 2 0.2398631953741309 0.00036105427849320016 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 138922 5309 YSEEECRQY True H1975_Epitope_Rep2 1205.46590273057 1205.46480993586 25.472 2 0.2398503017465619 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 138453 12797 YRFETVQKL True PC9_epitope_Rep5 1182.6397081186199 1182.63805490379 54.234 3 0.23984935363992083 0.00036105427849320016 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 38479 11823 HHALPITDL True PC9_epitope_Rep4 1015.54507945779 1015.5439899358599 53.245 2 0.2398424970723882 0.00036105427849320016 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 87459 4976 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 24.223 2 0.23983885644812208 0.00036105427849320016 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 109992 18924 THSQFIVVSL True PC9_epitope_Rep4 1129.6131590176099 1129.61206993586 80.877 2 0.23983694730146615 0.00036105427849320016 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 71720 5037 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 24.495 2 0.23983651614348464 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 52110 20281 KLQEFLQTL True PC9_epitope_Rep5 1118.63356010902 1118.6324699358602 83.063 2 0.2398345247206227 0.00036105427849320016 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI', 'nc|ENSG00000140525|Q9NVI1-4|FANCI', 'ENST00000568670.5_1_15:89790878-89801939:+|nuORF', 'ENST00000570110.1_1_15:89790878-89802018:+|nuORF'] 53455 9093 KVIDPATATSV True PC9_epitope_Rep6 1100.607739284 1100.60664993586 45.06 2 0.23981215925212657 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 1622 6219 AEFVEVTK True NCI_RA007_Epitope_Rep3 921.4807478657299 921.47964993586 31.468 2 0.23980887865760195 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 53098 8449 KSDVHLNFY True H1975_Epitope_Rep2 1121.55055876105 1121.54946993586 37.452 2 0.23980357221351087 0.00036105427849320016 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 94778 19598 RYLPTGSFPF True PC9_epitope_Rep4 1183.6025943339098 1183.6014899358602 83.508 2 0.23978814784102748 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 54060 20129 KYLTEGLLQF True PC9_epitope_Rep4 1210.65977485686 1210.6586699358602 85.561 2 0.23976873160187087 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 35401 13262 GTDELRLLY True H1975_Epitope_Rep2 1078.56587447202 1078.56476993586 56.141 2 0.23976145311528704 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 59064 8102 LGDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep2 1269.55471811541 1269.55362993586 36.147 2 0.2397511937627982 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 24333 10569 FADLSEAANR True PC9_epitope_Rep3 1092.5199869087598 1092.5188899358602 45.599 2 0.23973794498484863 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 14678 6821 DVNQQEFVR True NCI_RA007_Epitope_Rep5 1133.5465360097699 1133.54542993586 32.923 2 0.23972114477405881 0.00036105427849320016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 101791 10454 SPIENIQRV True PC9_epitope_Rep4 1054.57710786206 1054.5760099358602 47.921 2 0.23971790842715934 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 77223 18828 NYIEFTRIL True PC9_epitope_Rep6 1167.62880908175 1167.6277099358601 85.066 2 0.23971111648907542 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 105887 20872 SVLDDKLVFV True PC9_epitope_Rep2 1133.63322575585 1133.6321299358601 85.727 2 0.23970514221192188 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 89360 7601 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 34.19 2 0.23970177190195133 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 123390 15770 VIDEIRDLLY True H1975_Epitope_Rep2 1247.67615319699 1247.6750499358602 65.839 2 0.23968516628873585 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 6725 19020 AQDEHLITFF True PC9_epitope_Rep6 1219.58733819259 1219.58624993586 85.804 2 0.23968016515563237 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 4565 9902 ALAAAGYDVEK True PC9_epitope_Rep3 1106.56078909158 1106.5596899358602 43.045 2 0.2396613714997809 0.00036105427849320016 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6'] 94766 19949 RYLPKGFLNQF True PC9_epitope_Rep3 1381.7506555499297 1381.7490149037899 81.977 3 0.2396526145973409 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 132656 4472 VYQNHVQHL True NCI_RA007_Epitope_Rep2 1136.57269118796 1136.5710449037902 22.028 3 0.2396451607951846 0.00036105427849320016 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 61118 13548 LLDDAQRLLY True H1975_Epitope_Rep3 1218.66083748602 1218.6597499358602 57.394 2 0.23960997753391966 0.00036105427849320016 0.9438714419765777 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000523439.1_1_19:57999318-58003198:+|nuORF', 'nc|ENSG00000152439|Q6PK81-2|ZNF773', 'ENSG00000152439|ENST00000282292|ZNF773', 'nc|ENSG00000105136|Q96HQ0-6|ZNF419', 'nc|ENSG00000105136|Q96HQ0-2|ZNF419', 'nc|ENSG00000105136|Q96HQ0-3|ZNF419', 'nc|ENSG00000105136|Q96HQ0-4|ZNF419', 'ENSG00000105136|ENST00000221735|ZNF419', 'nc|ENSG00000105136|Q96HQ0-5|ZNF419', 'ENSG00000083814|ENST00000317398|ZNF671'] 41001 21730 HYFDPQYFEF True PC9_epitope_Rep3 1391.58225281215 1391.5811499358601 88.878 2 0.23960274895873285 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I'] 54039 11968 KYLSVQGQLF True NCI_RA007_Epitope_Rep3 1181.64445914589 1181.6433699358602 54.197 2 0.23959309834547385 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 129075 6780 VTAQVVGTERY True H1975_Epitope_Rep2 1221.6353510141698 1221.63424993586 30.994 2 0.2395871174441633 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000574268.1_1_17:4710512-4711565:+|nuORF', 'PLD2|p.T76Qfs*77|1|0.12|ENSG00000129219|chr17:4808096-4808097|AT/-|frameshift_variant'] 47411 11518 IYIKHPHLF True PC9_epitope_Rep6 1166.66004964038 1166.6584049037901 55.387 3 0.23956370832737353 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 54151 20575 KYNDNFFGL True PC9_epitope_Rep3 1116.5240096600398 1116.52290993586 84.408 2 0.2395636691155024 0.00036105427849320016 0.9438714419765777 ['ENSG00000012963|ENST00000013070|UBR7'] 13811 10417 DQVANSAFVER True PC9_epitope_Rep3 1234.59421447818 1234.5931099358602 45.008 2 0.2395565497164734 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 109665 13409 THDYPYSL True PC9_epitope_Rep5 994.43961132974 994.43850993586 56.594 2 0.2395526305333625 0.00036105427849320016 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214'] 23816 21645 EYLIVFPKL True PC9_epitope_Rep2 1120.6532329244399 1120.65212993586 88.732 2 0.23955202554469304 0.00036105427849320016 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 48357 7468 KEAEPIPETV True H1975_Epitope_Rep3 1111.57610480255 1111.5750099358602 33.704 2 0.23953853699978184 0.00036105427849320016 0.9438714419765777 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6'] 12733 11715 DLGIEIPAEK True H1975_Epitope_Rep1 1083.58119018299 1083.58008993586 50.053 2 0.23953246390650548 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 132079 10750 VYIKHPVSL True PC9_epitope_Rep1 1054.61751612206 1054.61640993586 46.238 2 0.23951015650402996 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 69067 12359 LVILEGELER True NCI_RA007_Epitope_Rep1 1169.6655885132898 1169.66448993586 52.047 2 0.2395008014155506 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 62539 6481 LLTEPPM[Oxidation]NPTK True H1975_Epitope_Rep1 1255.6482245774298 1255.6471299358602 29.99 2 0.2394976897935415 0.00036105427849320016 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083141-25083279:+|nuORF'] 95839 4489 [Acetylation]-SDKPDM[Oxidation]AEIEK True H1975_Epitope_Rep3 1319.5914978632497 1319.59038993586 22.386 2 0.23948836066840556 0.00036105427849320016 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 26393 12254 FIIYDTHSL True NCI_RA007_Epitope_Rep3 1107.56006081559 1107.5589699358602 55.349 2 0.23947274552687112 0.00036105427849320016 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'ENST00000539652.1_1_12:66522892-66539669:-|nuORF'] 53946 5443 KYISKPENL True PC9_epitope_Rep6 1090.60225998074 1090.60116993586 28.856 2 0.23945708518409578 0.00036105427849320016 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 61126 13665 LLDEAQRLLY True H1975_Epitope_Rep2 1232.67648755016 1232.67538993586 57.701 2 0.23943255695322624 0.00036105427849320016 0.9438714419765777 ['ENSG00000083817|ENST00000196489|ZNF416', 'ENSG00000197128|ENST00000356584|ZNF772', 'ENSG00000171649|ENST00000597850|ZIK1', 'nc|ENSG00000197128|Q68DY9|ZNF772', 'ENSG00000180884|ENST00000404801|ZNF792'] 47771 10999 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65934993586 47.627 2 0.23942880927135915 0.00036105427849320016 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 73057 9091 NDLAVVDVR True NCI_RA007_Epitope_Rep1 999.53490869691 999.53380993586 39.363 2 0.23941110015800163 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 113749 12671 TRDPFSSSL True PC9_epitope_Rep4 1008.48762415132 1008.48652993586 56.584 2 0.23939417240686178 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132153|Q7L2E3-3|DHX30', 'ENSG00000132153|ENST00000445061|DHX30', 'nc|ENSG00000132153|Q7L2E3-2|DHX30'] 7902 7427 ATATANQIILK True NCI_RA007_Epitope_Rep4 1142.66592286646 1142.66482993586 35.213 2 0.23937893798379647 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 90006 15603 RGDLPFVVPR True PC9_epitope_Rep3 1154.6560268890998 1154.65438490379 65.167 3 0.23936537366347224 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 14321 10607 DTDHYFLRY True H1975_Epitope_Rep2 1228.5512870370399 1228.5496349037899 45.823 3 0.23936117436516235 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 40409 18958 HRWQQIEIL True PC9_epitope_Rep5 1221.66184054553 1221.66019490379 77.946 3 0.23935823655020566 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167323|Q13586-2|STIM1', 'nc|ENSG00000167323|Q13586|STIM1', 'ENSG00000167323|ENST00000526596|STIM1', 'STIM1|p.G438A|1|0.31|ENSG00000167323|chr11:4083337-4083337|G/C|missense_variant', 'ENST00000533343.1_1_11:4103494-4104733:+|nuORF'] 73971 5688 NHNKITQSL True PC9_epitope_Rep5 1053.55670677065 1053.55560993586 26.875 2 0.2393532578382736 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 22229 13428 ETDLLDIRSEY True H1975_Epitope_Rep2 1352.64597526752 1352.64486993586 56.786 2 0.23932552012602512 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 93848 4614 RVFQDVAQK True NCI_RA007_Epitope_Rep4 1089.5930922793698 1089.59198993586 24.161 2 0.23931824392358236 0.00036105427849320016 0.9438714419765777 ['AGAP1-DIS3L2|1|fusion', 'AGAP1|p.A337Gfs*13|1|0.1|ENSG00000157985|chr2:235807289-235807290|-/G|frameshift_variant', 'nc|ENSG00000157985|Q9UPQ3-3|AGAP1', 'nc|ENSG00000157985|Q9UPQ3-2|AGAP1', 'ENSG00000157985|ENST00000304032|AGAP1', 'nc|ENSG00000133612|Q96P47-3|AGAP3', 'nc|ENSG00000133612|Q96P47-6|AGAP3', 'AGAP3|p.S273Wfs*103|1|0.37|ENSG00000133612|chr7:151118589-151118589|C/-|frameshift_variant', 'nc|ENSG00000133612|Q96P47-5|AGAP3', 'nc|ENSG00000133612|Q96P47|AGAP3', 'nc|ENSG00000133612|Q96P47-2|AGAP3', 'ENSG00000133612|ENST00000397238|AGAP3'] 45487 15671 ISEQFTAM[Oxidation]FR True PC9_epitope_Rep3 1244.58595867404 1244.58486993586 65.422 2 0.23929745656305212 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 84873 10743 QHQSGIVQL True PC9_epitope_Rep5 1008.5352430500798 1008.53414993586 46.314 2 0.23928814774052726 0.00036105427849320016 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 24753 17680 FAYDGKDYL True PC9_epitope_Rep5 1090.4971262058598 1090.4960299358602 73.02 2 0.23928238118981546 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 89509 4816 REQVTATPRIA True H1975_Epitope_Rep2 1240.6887835693599 1240.68712490379 23.614 3 0.23925268719648446 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169607|Q8IYA6-2|CKAP2L', 'nc|ENSG00000169607|Q8IYA6-3|CKAP2L', 'ENSG00000169607|ENST00000302450|CKAP2L'] 97708 20069 SHEEALSFVSL True PC9_epitope_Rep2 1217.5928174958499 1217.59172993586 82.601 2 0.23925003897113567 0.00036105427849320016 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 7438 11445 ASDFITKMDY True H1975_Epitope_Rep2 1189.53252573841 1189.5314299358602 49.075 2 0.23924947183873518 0.00036105427849320016 0.9438714419765777 ['ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'ENST00000373807.5_1_9:124074589-124093809:+|nuORF'] 40461 9834 HSDPSILGY True H1975_Epitope_Rep3 987.46616043075 987.46506993586 42.855 2 0.23924821271157992 0.00036105427849320016 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 137651 19467 YLYDLNHTL True PC9_epitope_Rep5 1150.5658744720201 1150.56476993586 79.932 2 0.23922438801259518 0.00036105427849320016 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1'] 114440 2753 TSEDISQTSKY True H1975_Epitope_Rep2 1257.5724759740901 1257.57136993586 14.618 2 0.2392126291717178 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3'] 72428 8404 MTEVLPNQRY True H1975_Epitope_Rep3 1249.6125073946098 1249.6114099358601 37.309 2 0.23920117872754462 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100003|O76054-5|SEC14L2', 'nc|ENSG00000100003|O76054-4|SEC14L2', 'ENSG00000100003|ENST00000615189|SEC14L2', 'ENST00000454552.5_3_22:30812232-30824714:+|nuORF'] 76082 8551 NRMLAQQAV True PC9_epitope_Rep1 1029.53894853153 1029.53784993586 37.728 2 0.23919363809611918 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 104845 7980 STELNHLGY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 35.665 2 0.2391876393377063 0.00036105427849320016 0.9438714419765777 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 105101 19076 STLHLVLRL True PC9_epitope_Rep5 1050.65496425994 1050.65386993586 78.405 2 0.23916950477077145 0.00036105427849320016 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 106971 15643 SYLEKQVVTF True PC9_epitope_Rep6 1212.6390394122798 1212.6379499358602 72.375 2 0.23916763873068989 0.00036105427849320016 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 19990 6967 EM[Oxidation]FEDTVEER True H1975_Epitope_Rep3 1299.5288972903898 1299.52778993586 31.761 2 0.23916544992210603 0.00036105427849320016 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7'] 82157 13666 PTDYADIM[Oxidation]MGY True H1975_Epitope_Rep2 1291.51007642211 1291.50896993586 57.705 2 0.23916406424783695 0.00036105427849320016 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 94137 16071 RWFQPAIPSW True NCI_RA007_Epitope_Rep5 1286.6560268890996 1286.65492993586 68.548 2 0.23915921070727128 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 35775 5783 GTVIHFNNPK True NCI_RA007_Epitope_Rep4 1125.59309227937 1125.59198993586 28.866 2 0.2391554981128461 0.00036105427849320016 0.9438714419765777 ['RGNEF-BTF3|1|fusion', 'nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 106257 6679 SVQEYFVRK True NCI_RA007_Epitope_Rep5 1154.6084079903396 1154.6067749037902 32.359 3 0.23912594473281235 0.00036105427849320016 0.9438714419765777 ['ENSG00000163781|ENST00000260810|TOPBP1'] 35786 10189 GTVYEDLRY True H1975_Epitope_Rep2 1114.5294889632999 1114.52838993586 44.195 2 0.23912591468799402 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|494|14.5|0.62|4.54|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C'] 16477 10621 EELTLEGIR True H1975_Epitope_Rep3 1058.5607890915799 1058.5596899358602 45.924 2 0.23912520077249239 0.00036105427849320016 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 128903 10383 VSTEVDARL True PC9_epitope_Rep5 988.5189242795998 988.51782993586 44.922 2 0.239119165768158 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 26581 5398 FKDLGEEHFK True NCI_RA007_Epitope_Rep5 1248.6138872935996 1248.61225490379 27.452 3 0.23911901549692888 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 57144 7607 LEEQSRLIAA True H1975_Epitope_Rep2 1128.6138872935999 1128.61278993586 34.213 2 0.23910475055609715 0.00036105427849320016 0.9438714419765777 ['ENSG00000157500|ENST00000288266|APPL1'] 85038 18962 QIIRELQVL True PC9_epitope_Rep2 1110.67609362734 1110.6749899358601 78.3 2 0.2390875366591437 0.00036105427849320016 0.9438714419765777 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'MAP2K1|p.R108Q|1|0.29|ENSG00000169032|chr15:66436777-66436777|G/A|missense_variant', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 15767 9366 EDENFILK True H1975_Epitope_Rep3 1006.4971262058599 1006.49602993586 41.027 2 0.2390755216018862 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 94765 19945 RYLPKGFLNQF True PC9_epitope_Rep3 1381.7506555499297 1381.7495499358602 81.962 2 0.23907040488432524 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 40365 6792 HRTELETKL True PC9_epitope_Rep3 1125.61422164677 1125.61258490379 31.145 3 0.2390595248481392 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 110688 18290 TIYKDFVYI True PC9_epitope_Rep6 1160.6117620352798 1160.6106699358602 82.995 2 0.23905698136095124 0.00036105427849320016 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 43865 17774 ILDEAIYKV True PC9_epitope_Rep3 1062.5961119711399 1062.5950099358602 73.568 2 0.23904718944455808 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 2276 18965 AEPLEIILHLP True H1975_Epitope_Rep2 1243.71762408615 1243.71652993586 78.723 2 0.23904437117793298 0.00036105427849320016 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 106909 20663 SYIRPEDIVNF True PC9_epitope_Rep1 1351.67721582615 1351.67610993586 84.303 2 0.2390442045711268 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 14310 11179 DTDEYVLKY True H1975_Epitope_Rep2 1144.52882025696 1144.5277299358602 48.038 2 0.23904191881769096 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1'] 84046 5643 QEQAQTTDWRA True H1975_Epitope_Rep2 1332.60584179104 1332.6047499358601 26.705 2 0.2390397449103707 0.00036105427849320016 0.9438714419765777 ['ENSG00000123739|ENST00000243501|PLA2G12A'] 94705 8039 RYLEQLHQL True NCI_RA007_Epitope_Rep3 1198.64585612822 1198.64422490379 38.71 3 0.23902912884377864 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 87750 20474 QVFPGLLERV True PC9_epitope_Rep3 1156.6604435631998 1156.65934993586 84.011 2 0.23902862576587539 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 109664 13473 THDYPYSL True PC9_epitope_Rep1 994.43961132974 994.43850993586 56.681 2 0.2390012494031313 0.00036105427849320016 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214'] 17501 21771 EHIGIGLLSL True PC9_epitope_Rep3 1050.60734536118 1050.6062499358602 89.039 2 0.23899304248678443 0.00036105427849320016 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 28874 5446 FTDTSYEEKRY True H1975_Epitope_Rep2 1437.6412242402498 1437.6395849037901 25.975 3 0.2389782992619045 0.00036105427849320016 0.9438714419765777 ['ENST00000488824.1_1_1:110279695-110282569:-|nuORF', 'ENSG00000134202|ENST00000361066|GSTM3'] 136557 14644 YHSEVPVSL True PC9_epitope_Rep5 1029.51311062317 1029.51200993586 61.331 2 0.2389695813963823 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 22900 9501 EVFEDAAEIR True H1975_Epitope_Rep3 1177.5615173675699 1177.5604299358602 41.55 2 0.2389643073198515 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 139780 10123 YVDDASWM[Oxidation]RY True H1975_Epitope_Rep2 1320.54448778488 1320.5433899358602 43.936 2 0.23896009438928248 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 68098 9208 LTPEEEEILNK True H1975_Epitope_Rep1 1313.6714617393698 1313.6703699358602 40.326 2 0.2389566658188869 0.00036105427849320016 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 54175 15067 KYPDIISRI True PC9_epitope_Rep2 1103.63389446219 1103.63278993586 63.212 2 0.23894648665456278 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 79088 20136 PFVDHVFTF True PC9_epitope_Rep4 1107.53893144819 1107.5378299358601 85.588 2 0.2389402366434509 0.00036105427849320016 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 94689 13076 RYLEKPMEI True PC9_epitope_Rep5 1177.6165301458898 1177.6154299358602 55.303 2 0.23893038335578629 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 118754 12242 VEDLSSYLHTA True H1975_Epitope_Rep2 1233.58773211541 1233.5866299358602 52.171 2 0.2389199081143141 0.00036105427849320016 0.9438714419765777 ['ENSG00000065618|ENST00000648076|COL17A1'] 101795 11690 SPIENIQRV True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 49.962 2 0.23891883531369984 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 51993 7158 KLEAEIATYR True NCI_RA007_Epitope_Rep1 1192.6451874218799 1192.6435349037902 31.832 3 0.23889614188436553 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 85041 17196 QIIRELQVL True PC9_epitope_Rep6 1110.67609362734 1110.6749899358601 78.733 2 0.2388560995211922 0.00036105427849320016 0.9438714419765777 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'MAP2K1|p.R108Q|1|0.29|ENSG00000169032|chr15:66436777-66436777|G/A|missense_variant', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 93647 17498 RTFDETVSTYV True PC9_epitope_Rep2 1316.62484590012 1316.6237499358601 72.563 2 0.23885318527605703 0.00036105427849320016 0.9438714419765777 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 71718 4822 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 23.675 2 0.23885177761365084 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 108617 6920 TEISEMNRNIS True H1975_Epitope_Rep2 1292.60306490972 1292.60196993586 31.539 2 0.23885040048128048 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF'] 105016 7046 STIGVDGSVYK True NCI_RA007_Epitope_Rep3 1124.5713537752797 1124.5702499358601 34.834 2 0.2388489919614515 0.00036105427849320016 0.9438714419765777 ['ENSG00000159399|ENST00000290573|HK2', 'HK2|p.L795Rfs*10|1|0.41|ENSG00000159399|chr2:74889253-74889262|TGGCCCTGCT/-|frameshift_variant', 'ENST00000447818.2_1_X:79828255-79829731:-|nuORF'] 101798 9810 SPIENIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 48.193 2 0.23884788745875232 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 46678 10182 ITVTSEVPFSK True NCI_RA007_Epitope_Rep5 1206.6496040959798 1206.6485099358601 45.799 2 0.23882776214187137 0.00036105427849320016 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22'] 45025 14939 IQLVEEELDR True PC9_epitope_Rep4 1242.6455813446998 1242.64448993586 65.403 2 0.23882738102564718 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 106264 9959 SVQGIILYR True NCI_RA007_Epitope_Rep5 1047.6076797143498 1047.60658993586 44.949 2 0.23882128877350822 0.00036105427849320016 0.9438714419765777 ['SLC25A4|p.I186L|1|0.58|ENSG00000151729|chr4:185145208-185145208|A/C|missense_variant'] 137220 12046 YLEQLHQLY True H1975_Epitope_Rep1 1205.60807363717 1205.6069699358602 51.345 2 0.23881340255267974 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 93905 17390 RVIEGDVVSAL True PC9_epitope_Rep5 1156.6451874218799 1156.6440899358602 71.892 2 0.2388049357699803 0.00036105427849320016 0.9438714419765777 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 112365 13216 TNAENEFVTIK True PC9_epitope_Rep3 1264.6299312805597 1264.62882993586 55.87 2 0.23879765225765978 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 27677 16541 FQDENHLYL True PC9_epitope_Rep5 1177.54038800017 1177.53928993586 68.627 2 0.23879111553823545 0.00036105427849320016 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 38560 18648 HHFEWIQKL True PC9_epitope_Rep1 1236.64037682496 1236.63874490379 76.518 3 0.23876676644607867 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 53205 12476 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep2 1213.59004099497 1213.58894993586 53.078 2 0.23875782799199544 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 40872 7173 HVLVTLGEK True PC9_epitope_Rep2 994.58113061334 994.58002993586 32.983 2 0.23875734274384727 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 43277 15736 IHDGMNLEL True PC9_epitope_Rep4 1040.49608066004 1040.49498993586 68.453 2 0.2387496424352693 0.00036105427849320016 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 29624 22777 FVLPELPSV True PC9_epitope_Rep3 999.56408356687 999.56298993586 92.881 2 0.23874953176172806 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 28865 9324 FTDQQKLIY True H1975_Epitope_Rep3 1154.5971746002997 1154.5960699358602 40.862 2 0.2387391231799649 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 48657 8841 KELEEIVQP True NCI_RA007_Epitope_Rep4 1083.5811901829898 1083.58008993586 40.817 2 0.2387294760855924 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000509378.1_1_4:165110937-165111516:+|nuORF'] 120521 21402 VFYPYPQYF True PC9_epitope_Rep4 1222.5698972232997 1222.56937496793 90.493 1 0.23872899055706343 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 54052 16947 KYLSVQGQLF True PC9_epitope_Rep6 1181.64445914589 1181.6433699358602 77.73 2 0.23870659239542696 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 96954 10480 SEVEVIHVP True H1975_Epitope_Rep2 1007.52876068731 1007.52766993586 45.329 2 0.23870647822072624 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 38124 5116 HEQEILHRDL True H1975_Epitope_Rep3 1288.6523980606398 1288.65076490379 24.789 3 0.23870643400774627 0.00036105427849320016 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2', 'ENST00000515415.5_1_5:57754112-57754961:-|nuORF'] 117632 12112 VAIEHLDKI True PC9_epitope_Rep3 1036.59169529704 1036.5905899358602 51.633 2 0.23868248386109517 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 132652 21653 VYQLRFQFL True PC9_epitope_Rep1 1212.6655289436396 1212.6644299358602 88.116 2 0.23867854345876827 0.00036105427849320016 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 140157 19548 YVTDVLYRV True PC9_epitope_Rep5 1126.60225998074 1126.60116993586 80.244 2 0.2386708590201156 0.00036105427849320016 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1'] 138982 10043 YSEVYPGQQY True H1975_Epitope_Rep3 1232.5349682665599 1232.5338699358601 43.666 2 0.23865963027012313 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 139071 12269 YSLEPVAVELK True H1975_Epitope_Rep3 1246.68090422426 1246.67980993586 52.37 2 0.23865526334554546 0.00036105427849320016 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 132556 19136 VYPHPGTWESF True PC9_epitope_Rep5 1318.59823722946 1318.5971499358602 78.642 2 0.2386452651369226 0.00036105427849320016 0.9438714419765777 ['ENSG00000197165|ENST00000335715|SULT1A2'] 17900 15432 EIDMNDIKAFY True H1975_Epitope_Rep2 1357.62240337197 1357.6213099358602 64.517 2 0.23862648634311728 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 119117 6225 VEILANDQGNR True NCI_RA007_Epitope_Rep1 1227.6207635791898 1227.6196699358602 28.249 2 0.2386206289804423 0.00036105427849320016 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 75651 21503 NQSELAVLL True PC9_epitope_Rep5 985.5444107514498 985.54330993586 87.746 2 0.23861724233309176 0.00036105427849320016 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 22261 5083 ETDRGMSAEY True H1975_Epitope_Rep2 1157.46590273057 1157.46480993586 24.635 2 0.2386171485137739 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 94394 13746 RYFDPANGKF True PC9_epitope_Rep1 1213.5880068989297 1213.58635490379 57.718 3 0.23861178323253013 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 52256 5162 KNLQTVNVDEN True NCI_RA007_Epitope_Rep4 1272.6309939097198 1272.62988993586 26.38 2 0.23860717630845474 0.00036105427849320016 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 105768 7120 SVIDTSTIVRK True NCI_RA007_Epitope_Rep4 1217.69795127073 1217.69629490379 34.007 3 0.23858512245517616 0.00036105427849320016 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 96729 8382 SEQFTAM[Oxidation]FR True H1975_Epitope_Rep3 1131.5018946969099 1131.5007899358602 37.224 2 0.2385725164235789 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 14259 5376 DSYVGDEAQSK True PC9_epitope_Rep1 1197.51496109797 1197.5138699358602 25.513 2 0.23855273936880814 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 85367 11028 QLDVAGRVMQY True H1975_Epitope_Rep1 1278.6390564956198 1278.6379499358602 47.38 2 0.23855007410113546 0.00036105427849320016 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 88367 6279 QYNPHVHQL True PC9_epitope_Rep1 1134.55704112382 1134.55594993586 28.965 2 0.23853353050543732 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 105589 10212 SVEEISTLVQK True NCI_RA007_Epitope_Rep2 1231.6659824361097 1231.6648899358602 44.312 2 0.23853328853576095 0.00036105427849320016 0.9438714419765777 ['ENSG00000055950|ENST00000318364|MRPL43', 'nc|ENSG00000055950|Q8N983-3|MRPL43', 'nc|ENSG00000055950|Q8N983-2|MRPL43', 'nc|ENSG00000055950|Q8N983|MRPL43', 'nc|ENSG00000055950|Q8N983-6|MRPL43', 'nc|ENSG00000055950|Q8N983-7|MRPL43'] 22196 13859 ETDEKDFYLYY True H1975_Epitope_Rep2 1484.6347418774799 1484.6336499358601 58.454 2 0.23853297702131435 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 23586 20798 EYDNFFQHL True PC9_epitope_Rep5 1211.5247379360299 1211.52364993586 85.048 2 0.23852193971174787 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 135267 19805 YAYFNFPEL True H1975_Epitope_Rep2 1162.5335117145798 1162.5324099358602 82.158 2 0.23849393877201672 0.00036105427849320016 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 97710 19359 SHEEALSFVSL True PC9_epitope_Rep4 1217.5928174958499 1217.59172993586 82.574 2 0.23849082872154653 0.00036105427849320016 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 116756 14384 TYLEKAIKI True PC9_epitope_Rep5 1077.6433965167298 1077.6422899358602 60.328 2 0.23846014976423133 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 94392 8620 RYFDPANGKF True NCI_RA007_Epitope_Rep5 1213.5880068989297 1213.5869099358601 39.832 2 0.2384383109858306 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 69207 11194 LVNELTEFAK True H1975_Epitope_Rep1 1162.6233893481399 1162.6222899358602 48.026 2 0.23843014721666062 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 7134 10420 AQYEHDLEV True PC9_epitope_Rep4 1102.4931034545798 1102.49200993586 47.789 2 0.2384265217062881 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 138862 5233 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 25.214 2 0.23842190801862842 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 138451 11453 YRFETVQKL True PC9_epitope_Rep2 1182.6397081186199 1182.63805490379 49.373 3 0.2384163149463707 0.00036105427849320016 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 121422 12306 VGIDIFTGK True H1975_Epitope_Rep1 948.52803241132 948.52692993586 52.362 2 0.23841492532035413 0.00036105427849320016 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 133267 15085 WEHWGGILP True H1975_Epitope_Rep2 1093.5345147740898 1093.5334099358602 63.176 2 0.23840591918758952 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130731|Q96S19-6|METTL26', 'ENSG00000130731|ENST00000301686|METTL26', 'nc|ENSG00000130731|Q96S19-4|METTL26', 'ENST00000448973.6_1_16:685482-685995:-|nuORF'] 53105 4053 KSFDEQNVPK True NCI_RA007_Epitope_Rep4 1190.59315184902 1190.59150490379 21.854 3 0.23840547286936603 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 70044 18273 LYGRNFNYL True PC9_epitope_Rep1 1158.5821932425 1158.58108993586 75.076 2 0.23840048798620567 0.00036105427849320016 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 129210 4624 VTDKSMVDKY True H1975_Epitope_Rep2 1184.5747249035599 1184.57308490379 22.887 3 0.23839963661784397 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 133010 10632 VYVQHPITF True NCI_RA007_Epitope_Rep4 1102.5811306133398 1102.58002993586 47.743 2 0.23838887608362316 0.00036105427849320016 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 132837 18683 VYTLLTTHL True PC9_epitope_Rep4 1059.5964463243101 1059.5953499358602 79.944 2 0.23837799379252445 0.00036105427849320016 0.9438714419765777 ['KDM2A-C11orf80|3|fusion', 'KDM2A-C11orf80|2|fusion', 'KDM2A-C11orf80|1|fusion', 'nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 94738 18009 RYLMDPDTF True PC9_epitope_Rep4 1156.52229540788 1156.52118993586 77.33 2 0.23835854350801136 0.00036105427849320016 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 104265 11292 SSDTADFRDLY True H1975_Epitope_Rep1 1288.55716026312 1288.55606993586 48.412 2 0.23834877910662539 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 49012 7070 KFIDTTSKF True NCI_RA007_Epitope_Rep3 1085.57571087973 1085.57460993586 34.927 2 0.23834139119350775 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 67448 7453 LTEDKETLQY True H1975_Epitope_Rep2 1238.60304782638 1238.6019499358601 33.614 2 0.23833294706067962 0.00036105427849320016 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'TUBGCP2|p.S354Vfs*53|1|0.11|ENSG00000130640|chr10:133292653-133292654|-/C|frameshift_variant'] 127399 16853 VQQTVQDLFGR True PC9_epitope_Rep3 1289.67279915205 1289.67170993586 69.978 2 0.2383201269362243 0.00036105427849320016 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 67600 11570 LTEVDNYHFY True H1975_Epitope_Rep1 1299.5771674317102 1299.57606993586 49.49 2 0.23831730437854443 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 119000 5658 VEFM[Oxidation]DDTSR True NCI_RA007_Epitope_Rep1 1114.46008945458 1114.45898993586 26.068 2 0.23831318595535714 0.00036105427849320016 0.9438714419765777 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 72287 4502 MSEDKPQDY True H1975_Epitope_Rep2 1111.44919003727 1111.44808993586 22.428 2 0.23830094897847773 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 35449 7401 GTEFGGSIYQK True NCI_RA007_Epitope_Rep3 1185.56660274801 1185.56550993586 36.238 2 0.23828740755066355 0.00036105427849320016 0.9438714419765777 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000489906.5_1_5:133308464-133311792:-|nuORF', 'nc|ENSG00000165637|P45880-2|VDAC2', 'ENSG00000078668|ENST00000022615|VDAC3', 'nc|ENSG00000078668|Q9Y277-2|VDAC3', 'ENSG00000165637|ENST00000332211|VDAC2', 'nc|ENSG00000165637|P45880-1|VDAC2'] 26675 11202 FLDASGAKLDY True H1975_Epitope_Rep1 1198.5870038394198 1198.5859099358602 48.057 2 0.23827513464997854 0.00036105427849320016 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 21122 19739 ERDPVLWSL True PC9_epitope_Rep4 1113.58185888933 1113.5807699358602 84.05 2 0.23827473494841203 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 65241 10775 LSEERVWEY True H1975_Epitope_Rep2 1209.56660274801 1209.56550993586 46.476 2 0.23827058376345084 0.00036105427849320016 0.9438714419765777 ['ENSG00000104142|ENST00000220509|VPS18'] 113755 7785 TRDPQFQKL True PC9_epitope_Rep1 1131.6036569630699 1131.6020249037902 34.768 3 0.238269674392459 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 2049 12491 AELENLVNQAA True H1975_Epitope_Rep3 1170.58806646858 1170.58696993586 53.242 2 0.23826896140500267 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 135523 9850 YEEDAHITFA True H1975_Epitope_Rep3 1194.51931820242 1194.51822993586 42.917 2 0.23826694667635467 0.00036105427849320016 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'nc|ENSG00000183054|Q99666-2|RGPD5', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 42055 6707 IEEDKWRVA True H1975_Epitope_Rep2 1144.5876725457601 1144.58656993586 30.71 2 0.23826393137224644 0.00036105427849320016 0.9438714419765777 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'STARD4|p.K141Rfs*29|1|0.29|ENSG00000164211|chr5:111500082-111500082|T/-|frameshift_variant', 'ENSG00000164211|ENST00000296632|STARD4'] 135856 5545 YEQSAQAAQQV True H1975_Epitope_Rep2 1221.56257999673 1221.5614899358602 26.336 2 0.2382464493381995 0.00036105427849320016 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 76088 8568 NRMLAQQAV True PC9_epitope_Rep5 1029.53894853153 1029.53784993586 37.898 2 0.23823272609342178 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 89727 10544 REYQELMSV True NCI_RA007_Epitope_Rep1 1153.54375912845 1153.5426699358602 44.998 2 0.2382208890855213 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 35260 10271 GSLNWVPVTK True NCI_RA007_Epitope_Rep3 1099.6025943339098 1099.6014899358602 47.474 2 0.2381973184828911 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE'] 140814 10045 YYSPTKNEI True PC9_epitope_Rep1 1113.53423999057 1113.5331499358601 43.506 2 0.238194971182316 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 75753 14077 NRAEYYHLL True PC9_epitope_Rep5 1177.58800689893 1177.58635490379 59.161 3 0.23817539738160604 0.00036105427849320016 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 14824 16826 DYDSVFHHL True PC9_epitope_Rep5 1131.4985231881901 1131.49742993586 69.731 2 0.23816309745496878 0.00036105427849320016 0.9438714419765777 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 37410 10639 GVYSFQFNK True NCI_RA007_Epitope_Rep5 1088.52909504048 1088.5279899358602 47.56 2 0.2381622308156651 0.00036105427849320016 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000525031.2_1_12:94817522-94817669:-|nuORF'] 14594 13099 DVIEEYFK True H1975_Epitope_Rep3 1041.50187723313 1041.5007899358602 55.63 2 0.23814277847570509 0.00036105427849320016 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12'] 15297 5270 EAIEGTYIDKK True NCI_RA007_Epitope_Rep5 1265.6503323719696 1265.6486849037901 26.967 3 0.23814040369695083 0.00036105427849320016 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF'] 132655 21591 VYQLRFQFL True PC9_epitope_Rep5 1212.6655289436396 1212.6644299358602 88.09 2 0.23813640708236922 0.00036105427849320016 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 117051 12828 TYQQVQQTL True PC9_epitope_Rep3 1107.55603806431 1107.5549499358601 54.363 2 0.23810757614200367 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 102630 15425 SQDARFYAL True PC9_epitope_Rep1 1069.51925863277 1069.5181699358602 64.151 2 0.2381005281800922 0.00036105427849320016 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 81484 21106 PQPDVFPLF True PC9_epitope_Rep6 1058.54368247546 1058.5425899358602 94.019 2 0.23809564953974027 0.00036105427849320016 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 116508 11552 TYDSVTDKF True PC9_epitope_Rep4 1074.48695544498 1074.4858499358602 52.195 2 0.23809386421101877 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 14472 6990 DTSRPLGDSM[Oxidation]Y True H1975_Epitope_Rep2 1256.5343170239998 1256.5332099358602 31.81 2 0.23808290808314547 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 74154 15858 NHYNNIMAL True PC9_epitope_Rep5 1088.50731405008 1088.5062099358602 65.989 2 0.23808073555349804 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 73873 13597 NHHLFTTTI True PC9_epitope_Rep1 1082.5508931142201 1082.5497899358602 57.157 2 0.238075379043822 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 94368 14806 RYALQMEQL True PC9_epitope_Rep6 1150.5804789903398 1150.57938993586 68.921 2 0.2380716767609081 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 57992 4653 LEQVESGLHRA True H1975_Epitope_Rep2 1237.64149902377 1237.6398449037902 22.996 3 0.23805089412941013 0.00036105427849320016 0.9438714419765777 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40', 'ENST00000555232.5_1_14:21538555-21549271:+|nuORF', 'ENST00000554514.1_1_14:21549058-21555515:+|nuORF'] 47225 18018 IYDPNLAFLRF True NCI_RA007_Epitope_Rep1 1367.7237720957498 1367.72266993586 74.224 2 0.23804846473241864 0.00036105427849320016 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 102957 22854 SQIPFPLSL True PC9_epitope_Rep2 1000.5593325396 1000.55822993586 93.397 2 0.23804801240868886 0.00036105427849320016 0.9438714419765777 ['ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 28456 12132 FSEPRAIFY True H1975_Epitope_Rep3 1128.56039516876 1128.55928993586 51.833 2 0.23804789642932814 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000123143|Q16512-2|PKN1', 'ENSG00000123143|ENST00000242783|PKN1', 'TECR-PKN1|1|fusion'] 130793 14726 VVEQLKDWLY True H1975_Epitope_Rep3 1291.68123857743 1291.68014993586 62.018 2 0.238026530099003 0.00036105427849320016 0.9438714419765777 ['ENSG00000164109|ENST00000296509|MAD2L1'] 64042 9541 LQDGEFSM[Oxidation]DLR True NCI_RA007_Epitope_Rep1 1325.59216625329 1325.59106993586 41.11 2 0.23801263507817283 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 67163 15669 LTDFDIRFY True H1975_Epitope_Rep2 1188.5815245361598 1188.5804299358601 65.428 2 0.23800579926695728 0.00036105427849320016 0.9438714419765777 ['ENSG00000070770|ENST00000262506|CSNK2A2', 'ENST00000562367.1_1_16:58208309-58230657:-|nuORF'] 39885 21094 HQIPEFDNLYL True PC9_epitope_Rep1 1387.67721582615 1387.67610993586 85.968 2 0.23800213143262383 0.00036105427849320016 0.9438714419765777 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1'] 131654 21335 VWFRIPNQF True PC9_epitope_Rep5 1205.6345631685297 1205.6334699358601 87.123 2 0.23800054582647812 0.00036105427849320016 0.9438714419765777 ['ENSG00000013583|ENST00000014930|HEBP1'] 131867 22506 VYDPLFSQL True PC9_epitope_Rep1 1080.54916177872 1080.5480699358602 91.37 2 0.23798691343686237 0.00036105427849320016 0.9438714419765777 ['ENSG00000100104|ENST00000215917|SRRD'] 31946 12183 GESDDSILRLA True H1975_Epitope_Rep2 1174.58298108814 1174.58188993586 51.943 2 0.23796632399727274 0.00036105427849320016 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 132056 7221 VYIHHFDRI True NCI_RA007_Epitope_Rep4 1198.6247267608198 1198.62307490379 34.409 3 0.23796066708087885 0.00036105427849320016 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A'] 30019 16644 FYHKYFNYL True PC9_epitope_Rep4 1293.61824439805 1293.6171499358602 71.986 2 0.23795790809754508 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 140874 15831 YYTPITPHL True PC9_epitope_Rep6 1103.56514619603 1103.56404993586 73.159 2 0.23794849712486948 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 93751 3060 RTSEIYVHR True NCI_RA007_Epitope_Rep3 1159.6098049726697 1159.60816490379 17.123 3 0.23794792865227937 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 48713 4738 KEMPVKVEA True NCI_RA007_Epitope_Rep4 1029.5528672601697 1029.5517699358602 24.659 2 0.23793191529922258 0.00036105427849320016 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant', 'nc|ENSG00000133704|O15397-2|IPO8'] 26680 11306 FLDASGAKLDY True H1975_Epitope_Rep3 1198.5870038394198 1198.5859099358602 48.594 2 0.2379244293075618 0.00036105427849320016 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 75634 16425 NQSEKIFSL True PC9_epitope_Rep1 1064.55022440788 1064.54912993586 68.002 2 0.23792028865357073 0.00036105427849320016 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426'] 13925 18978 DRFFSEYEKL True PC9_epitope_Rep1 1332.6350166609998 1332.6339099358602 77.784 2 0.23788305745055385 0.00036105427849320016 0.9438714419765777 ['ENSG00000135932|ENST00000258418|CAB39'] 24198 15465 EYVEKFYRI True PC9_epitope_Rep1 1245.6393737654498 1245.63772490379 64.307 3 0.23787083875433146 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 92278 18657 RQLEEEGITFV True PC9_epitope_Rep1 1319.6721304457096 1319.6710299358601 76.552 2 0.23786940242647428 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 94795 11007 RYLQTLTTI True NCI_RA007_Epitope_Rep5 1107.62880908175 1107.6277099358601 48.972 2 0.2378664141453684 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 9084 19575 AVLDDKLYVV True PC9_epitope_Rep5 1133.63322575585 1133.6321299358601 80.347 2 0.23783887478140536 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 2373 11150 AEQFRLEQI True H1975_Epitope_Rep2 1132.5876725457597 1132.58656993586 47.925 2 0.23781806117472923 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185104|Q9UNN5-2|FAF1', 'ENSG00000185104|ENST00000396153|FAF1'] 38761 14912 HHYEGAVVIL True PC9_epitope_Rep1 1136.5978433066398 1136.5961849037901 62.181 3 0.2378017256531458 0.00036105427849320016 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 38126 10930 HEQFIPIAA True H1975_Epitope_Rep1 1024.5341804209197 1024.53308993586 47.005 2 0.237791255801707 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 135184 18100 YAVDAYFREA True PC9_epitope_Rep1 1203.55603806431 1203.5549499358601 74.414 2 0.23778893687743383 0.00036105427849320016 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 132989 13523 VYVERAEVL True PC9_epitope_Rep1 1076.5866099165999 1076.58550993586 56.872 2 0.23778563821703216 0.00036105427849320016 0.9438714419765777 ['ENSG00000089234|ENST00000419234|BRAP'] 40465 8560 HSDQQVFEY True H1975_Epitope_Rep2 1151.4883524273098 1151.48724993586 37.882 2 0.23777695881122116 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'SNTB2-CIRH1A|1|fusion'] 136833 21381 YIVDLLTHL True PC9_epitope_Rep4 1085.61209638845 1085.61098993586 90.41 2 0.2377703723082052 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2', 'GFOD2|p.V233Cfs*3|1|0.17|ENSG00000141098|chr16:67675617-67675618|-/C|frameshift_variant'] 134817 18979 WYQTKFETL True PC9_epitope_Rep5 1214.5971746002997 1214.5960699358602 78.028 2 0.23776866542582328 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 89365 8805 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 38.834 2 0.2377551095198201 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 113908 14127 TRIGLETSL True PC9_epitope_Rep2 988.55530978832 988.55420993586 59.611 2 0.23774079122001898 0.00036105427849320016 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 43724 10960 IISIAEDEDLR True NCI_RA007_Epitope_Rep1 1272.6561460284 1272.65504993586 46.627 2 0.2377321608034263 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 110638 6646 TIVEEVQDGK True H1975_Epitope_Rep3 1116.5662683948397 1116.56516993586 30.519 2 0.23772612004201654 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2'] 53698 13843 KYDEIFYNL True NCI_RA007_Epitope_Rep3 1203.5811901829898 1203.58008993586 61.781 2 0.2377243687938807 0.00036105427849320016 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 132376 14195 VYMELSQKL True PC9_epitope_Rep6 1109.57908200801 1109.5779899358602 66.485 2 0.23771542638654442 0.00036105427849320016 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 30079 19005 FYMDTSHLF True PC9_epitope_Rep6 1159.5008316873098 1159.4997299358602 85.746 2 0.23770870415769332 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 83488 19497 QDGQFSVLFTK True PC9_epitope_Rep1 1268.6401020414398 1268.63900993586 79.814 2 0.23770767174310284 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 105916 18971 SVLDQKILL True PC9_epitope_Rep4 1027.62774645259 1027.62664993586 81.062 2 0.2376993998754672 0.00036105427849320016 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 57246 13457 LEFLNRFEEA True H1975_Epitope_Rep3 1266.6244519773002 1266.62334993586 57.035 2 0.23769810961189952 0.00036105427849320016 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 4198 21044 AIDPHLLLSV True PC9_epitope_Rep3 1076.6229954253201 1076.62188993586 86.225 2 0.2376960526417546 0.00036105427849320016 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 132872 9062 VYTSGVYHI True NCI_RA007_Epitope_Rep4 1037.51819600361 1037.51767496793 41.69 1 0.23769091325043187 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 9870 20519 AYMPHTFFI True PC9_epitope_Rep2 1125.53173789277 1125.53064993586 84.357 2 0.23766812256911468 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 23582 20861 EYDNFFQHL True PC9_epitope_Rep1 1211.5247379360299 1211.52364993586 85.067 2 0.23765900622302882 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 65304 8023 LSEKPTVTTVY True H1975_Epitope_Rep2 1236.6601687796801 1236.65906993586 35.808 2 0.23764439540319762 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105854|Q15165-3|PON2', 'nc|ENSG00000105854|Q15165-1|PON2', 'ENSG00000105854|ENST00000222572|PON2'] 42807 20156 IFIQNSKLYF True PC9_epitope_Rep2 1271.69140933831 1271.6903099358601 82.942 2 0.23761419794412958 0.00036105427849320016 0.9438714419765777 ['ENSG00000138459|ENST00000492406|SLC35A5'] 43685 7089 IINNTENLVR True H1975_Epitope_Rep3 1184.65133543148 1184.6502299358601 32.235 2 0.23761303139565632 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 73895 7225 NHHLQETSF True PC9_epitope_Rep5 1111.50467119779 1111.50356993586 32.755 2 0.2376123608454257 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 24831 17126 FDAGELITQR True PC9_epitope_Rep3 1148.5825871653199 1148.5814899358602 71.03 2 0.23760898094621033 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 59612 12181 LGSFLYEYSR True H1975_Epitope_Rep1 1233.6029882567298 1233.60188993586 51.873 2 0.23759954180647722 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 137050 19510 YKVEYPIMY True PC9_epitope_Rep5 1204.58383303528 1204.58272993586 80.098 2 0.23758616733948318 0.00036105427849320016 0.9438714419765777 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 7717 6333 ASREEILAQAK True PC9_epitope_Rep3 1214.66190011518 1214.66026490379 29.389 3 0.23756925053884456 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 28308 16478 FRYPTTEEL True PC9_epitope_Rep3 1154.5607890915799 1154.5596899358602 68.52 2 0.23756228680075034 0.00036105427849320016 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 40837 8719 HVLEAQDLIAK True NCI_RA007_Epitope_Rep4 1235.68738658703 1235.68628993586 40.33 2 0.23755008948431022 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 83357 11810 QAQEVFFLK True NCI_RA007_Epitope_Rep4 1108.59169529704 1108.5905899358602 52.404 2 0.23754581120819282 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 28527 8661 FSHEEIAM[Oxidation]ATV True NCI_RA007_Epitope_Rep2 1249.5648888762898 1249.56378993586 38.336 2 0.23754509117745212 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 30060 20656 FYLEGGFSKF True PC9_epitope_Rep5 1193.57571087973 1193.57460993586 84.506 2 0.23753445210953797 0.00036105427849320016 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 132158 10321 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5287299358602 44.645 2 0.23752437145486366 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 54805 17757 LAFEEEFGRV True PC9_epitope_Rep6 1195.5873381925899 1195.58624993586 80.936 2 0.2375001117909872 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 97488 6898 SGM[Oxidation]NVAGVSLK True NCI_RA007_Epitope_Rep1 1077.54884488933 1077.54774993586 30.835 2 0.2374518623934117 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 1441 11060 AEEIAGKWLQA True H1975_Epitope_Rep3 1214.62953735774 1214.62844993586 47.632 2 0.2374479658629934 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 69838 13990 LYADVGGKQF True PC9_epitope_Rep3 1096.55530978832 1096.5542099358602 58.884 2 0.23744796253832684 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 97131 7482 SFETTEESLR True H1975_Epitope_Rep1 1197.55134660669 1197.5502499358602 33.778 2 0.23742424252428415 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 76120 14635 NRPNLYYEV True PC9_epitope_Rep1 1166.57202248162 1166.57092993586 61.117 2 0.23741999392176666 0.00036105427849320016 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 72387 7464 MTEGSTVNTEY True H1975_Epitope_Rep2 1230.50743318938 1230.50632993586 33.657 2 0.23741666630774658 0.00036105427849320016 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 70079 19757 LYIGWDKHYGF True PC9_epitope_Rep2 1397.67682190333 1397.67572993586 81.383 2 0.2373915034089102 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 40880 6439 HVLVTLGEK True PC9_epitope_Rep6 994.58113061334 994.58002993586 33.395 2 0.23739136633884786 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 6881 13549 AQIKELEEL True PC9_epitope_Rep6 1071.58119018299 1071.58008993586 63.847 2 0.23738386886294865 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 26234 14976 FHYEADGANVL True PC9_epitope_Rep4 1234.5618517207397 1234.56074993586 65.543 2 0.2373770525182006 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 53396 6443 KVEAFQTTISK True NCI_RA007_Epitope_Rep2 1250.6870522338602 1250.6859499358602 29.67 2 0.23737021501572622 0.00036105427849320016 0.9438714419765777 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000442824.1_1_5:97549420-97549822:+|nuORF', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000559359.1_1_14:24613399-24613677:-|nuORF', 'ENST00000453033.1_1_13:49345602-49345743:+|nuORF'] 23963 12556 EYPDRIMNTF True NCI_RA007_Epitope_Rep2 1284.5808729131597 1284.5797699358602 53.454 2 0.23735691048165802 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 6775 12396 AQEYEALLNIK True H1975_Epitope_Rep3 1290.6819668534197 1290.68086993586 52.87 2 0.23734015319330895 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 53403 18700 KVFDPVPVGV True PC9_epitope_Rep1 1055.60153170475 1055.6004299358601 76.719 2 0.23733826379889925 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 71799 13488 M[Oxidation]NSFVNDIFER True H1975_Epitope_Rep1 1386.62380073474 1386.62270993586 57.0 2 0.23733640936776995 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 14679 6912 DVNQQEFVR True NCI_RA007_Epitope_Rep5 1133.5465360097699 1133.54542993586 33.273 2 0.23730791354712222 0.00036105427849320016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 73684 8653 NGQDLGVAFK True NCI_RA007_Epitope_Rep2 1047.5349086969097 1047.53380993586 38.305 2 0.23730660177417773 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 140864 11762 YYTPITPHL True NCI_RA007_Epitope_Rep4 1103.56514619603 1103.56404993586 52.214 2 0.2372750221900904 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 71725 5569 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 26.462 2 0.2372558570194146 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 94644 22312 RYLDLFTSF True PC9_epitope_Rep1 1160.5866099165999 1160.58550993586 90.635 2 0.23723388704837886 0.00036105427849320016 0.9438714419765777 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 140697 9239 YYQDTPKQI True PC9_epitope_Rep5 1154.5607890915799 1154.5596899358602 40.485 2 0.2372333772344151 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 70955 11492 M[Oxidation]ENFVAFVDK True H1975_Epitope_Rep3 1214.5641606002998 1214.56306993586 49.326 2 0.23722491081612668 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 47862 21293 IYTKIMDLI True PC9_epitope_Rep1 1108.620218544 1108.6191299358602 86.731 2 0.23719791282383246 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1', 'DPY19L1-CDKAL1|1|fusion'] 39870 12980 HQIEAVDGEEL True PC9_epitope_Rep3 1238.5778957076998 1238.57678993586 54.955 2 0.23719040343185438 0.00036105427849320016 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 94784 21813 RYLPTGSFPFL True PC9_epitope_Rep3 1296.6866583110398 1296.68556993586 89.202 2 0.23714483003898573 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 116783 18177 TYLPAPEGLKF True PC9_epitope_Rep6 1234.65977485686 1234.6586699358602 82.559 2 0.23713856586846227 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 130283 12159 VTTDIQVKV True PC9_epitope_Rep2 1001.5757108797299 1001.5746099358599 52.081 2 0.23713239608689468 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 140368 15197 YYEKLHTYF True PC9_epitope_Rep5 1262.5971746003 1262.5960699358602 63.462 2 0.23711320153031132 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 108090 15727 TDLLLEPYNK True PC9_epitope_Rep4 1204.6339540318397 1204.6328499358601 68.419 2 0.23711092220694038 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 37409 10477 GVYSFQFNK True NCI_RA007_Epitope_Rep4 1088.52909504048 1088.5279899358602 47.149 2 0.23709881402219193 0.00036105427849320016 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000525031.2_1_12:94817522-94817669:-|nuORF'] 93844 18274 RVFIGNLNTL True PC9_epitope_Rep4 1145.65569253593 1145.65458993586 78.362 2 0.23709465619952771 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 27700 14538 FQDKDQVFI True PC9_epitope_Rep4 1138.56587447202 1138.56476993586 63.835 2 0.23709406622034984 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 24223 7167 EYVRNQQTI True PC9_epitope_Rep1 1149.57783613805 1149.5767299358602 32.378 2 0.23708964857694298 0.00036105427849320016 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 85493 20878 QLIDKVWQL True PC9_epitope_Rep5 1141.64954452633 1141.64844993586 85.359 2 0.23708931907737918 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 9696 10646 AYIERMNYI True NCI_RA007_Epitope_Rep3 1171.5695799534699 1171.56848993586 48.924 2 0.23707769584502641 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'ENSG00000176105|ENST00000314574|YES1'] 2504 9839 AEQQALRLEV True H1975_Epitope_Rep2 1155.6247863304698 1155.62368993586 42.832 2 0.23706692599307932 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 26109 20001 FHFQDQQILTL True PC9_epitope_Rep4 1388.7088503075997 1388.7077499358602 85.066 2 0.23706364925713325 0.00036105427849320016 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 69926 18281 LYDPVISKL True PC9_epitope_Rep2 1046.6011973515801 1046.60010993586 75.639 2 0.23705784164608523 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 116539 14813 TYESIFSHF True NCI_RA007_Epitope_Rep5 1129.50802524273 1129.5069299358602 63.65 2 0.2370329795213761 0.00036105427849320016 0.9438714419765777 ['ENST00000530761.5_1_11:117857521-117870353:+|nuORF', 'ENSG00000110324|ENST00000227752|IL10RA'] 67164 15536 LTDFDIRFY True H1975_Epitope_Rep3 1188.5815245361598 1188.5804299358601 65.178 2 0.23703144569295903 0.00036105427849320016 0.9438714419765777 ['ENSG00000070770|ENST00000262506|CSNK2A2', 'ENST00000562367.1_1_16:58208309-58230657:-|nuORF'] 131890 20609 VYDVVELKF True PC9_epitope_Rep5 1110.5961119711399 1110.5950099358602 84.321 2 0.23701649551726658 0.00036105427849320016 0.9438714419765777 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 113767 7800 TRDPQFQKL True PC9_epitope_Rep5 1131.6036569630699 1131.6020249037902 34.946 3 0.23700980835802676 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 29387 7855 FVETESVRY True H1975_Epitope_Rep1 1128.54513902744 1128.5440499358601 35.166 2 0.2370078168311235 0.00036105427849320016 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1'] 54386 10541 KYQKGFSLW True NCI_RA007_Epitope_Rep4 1155.6076797143498 1155.60658993586 47.393 2 0.23700613517242933 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 61263 15025 LLDSDEPLVY True H1975_Epitope_Rep3 1162.57577044938 1162.5746699358601 63.184 2 0.23699245452925993 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 105754 17495 SVIDHIHLI True PC9_epitope_Rep4 1045.59202965021 1045.59092993586 75.297 2 0.23696941063862287 0.00036105427849320016 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 42950 5794 IGAEVYHNLK True H1975_Epitope_Rep3 1142.60840799034 1142.6067749037902 27.31 3 0.23696312912878892 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 56573 9857 LDVTSVEDYK True H1975_Epitope_Rep3 1167.5659340416698 1167.5648299358602 42.944 2 0.2369505551971532 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000432974.1_1_13:79483649-79483910:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 112596 8945 TPAQYDASELK True PC9_epitope_Rep1 1221.58773211541 1221.5866299358602 39.249 2 0.23694286141698653 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 132278 20157 VYLDKFIRL True PC9_epitope_Rep1 1165.68593003505 1165.68482993586 82.363 2 0.2369423316635443 0.00036105427849320016 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 69963 19627 LYEKDIQLF True PC9_epitope_Rep2 1167.6175756917098 1167.61646993586 80.88 2 0.23694167504309852 0.00036105427849320016 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 42619 7769 IETIEVM[Oxidation]EDR True NCI_RA007_Epitope_Rep1 1249.58601824369 1249.5849299358601 34.209 2 0.23693771756702156 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 39376 13106 HLVDEPQNLIK True PC9_epitope_Rep5 1304.7088503076 1304.7077499358602 55.416 2 0.2369348729437944 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 18766 9171 ELDPSNTKALY True H1975_Epitope_Rep3 1249.61903224369 1249.61792993586 40.266 2 0.23692733090549492 0.00036105427849320016 0.9438714419765777 ['ENSG00000171497|ENST00000307720|PPID'] 131794 10991 VYANGIRNI True PC9_epitope_Rep1 1018.5559784946599 1018.55488993586 47.166 2 0.23692663182896276 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 138980 10113 YSEVYPGQQY True H1975_Epitope_Rep2 1232.5349682665599 1232.5338699358601 43.896 2 0.23689617124938298 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 9265 3967 AVQRTLLEK True NCI_RA007_Epitope_Rep5 1056.6291434349198 1056.6280499358602 21.618 2 0.23688958624824022 0.00036105427849320016 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 11597 7413 DGYNYTLSK True H1975_Epitope_Rep3 1059.48728979815 1059.48618993586 33.491 2 0.23688266510623768 0.00036105427849320016 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 73004 10041 NDEELNKLLGK True NCI_RA007_Epitope_Rep1 1271.6721304457099 1271.67049490379 43.065 3 0.2368816662766368 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 138259 13597 YQVDSRTYL True PC9_epitope_Rep5 1143.5560380643099 1143.5549499358601 57.326 2 0.23687679045686236 0.00036105427849320016 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000513152.1_1_5:40764586-40764871:-|nuORF'] 12321 11948 DITSDTSGDFR True PC9_epitope_Rep1 1212.5258601348398 1212.5247699358601 50.824 2 0.23687126558547852 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 128873 5918 VSSTSEIGTRY True H1975_Epitope_Rep3 1198.5829810881398 1198.58188993586 27.772 2 0.2368399088135653 0.00036105427849320016 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 9754 11948 AYLEAIHNF True NCI_RA007_Epitope_Rep5 1076.52909504048 1076.5279899358602 52.615 2 0.236822234051625 0.00036105427849320016 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 70055 19106 LYHDIFSRL True PC9_epitope_Rep1 1162.61349337078 1162.6118549037901 78.28 3 0.2368090909704637 0.00036105427849320016 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 137137 13477 YLDKEDTFFY True H1975_Epitope_Rep3 1339.5972341699498 1339.59612993586 57.114 2 0.23680862589514806 0.00036105427849320016 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 134953 14393 YAFNMKATV True PC9_epitope_Rep4 1043.5110024481899 1043.5099099358602 63.272 2 0.23679395727621325 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 16556 6456 EEQLQQIRAE True H1975_Epitope_Rep2 1242.6204292260197 1242.6193299358602 29.75 2 0.23679300600319697 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 89359 7506 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 33.822 2 0.23676562575177945 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 54649 8241 LADSDARALY True H1975_Epitope_Rep2 1093.54038800017 1093.53928993586 36.652 2 0.23675892483932495 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 89377 9163 REMEENFAVEA True H1975_Epitope_Rep2 1323.57651580871 1323.57540993586 40.197 2 0.23674921103040084 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 110407 14271 TIM[Oxidation]PKDIQL True PC9_epitope_Rep2 1073.57908238845 1073.5779899358602 60.16 2 0.23671706399687015 0.00036105427849320016 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'H3-5|p.R128H|1|0.5|ENSG00000188375|chr12:31791784-31791784|C/T|missense_variant', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 47489 20329 IYKPVTDFF True PC9_epitope_Rep3 1128.5855472874398 1128.5844499358602 83.445 2 0.23670331996113594 0.00036105427849320016 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF', 'ENST00000472420.5_1_2:44123526-44126707:-|nuORF'] 37971 7648 HEFLHEVPAA True NCI_RA007_Epitope_Rep4 1148.56145779792 1148.56036993586 36.073 2 0.23669994342329875 0.00036105427849320016 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 48987 11634 KFDQLLAEEK True PC9_epitope_Rep5 1219.6448530687096 1219.64320490379 49.745 3 0.23669748918612374 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 40692 7987 HTMEFALVK True NCI_RA007_Epitope_Rep3 1074.55320161334 1074.55210993586 38.516 2 0.2366962560399736 0.00036105427849320016 0.9438714419765777 ['ENSG00000182636|ENST00000649030|NDN'] 72829 18859 NALDKVLSV True PC9_epitope_Rep5 957.54949613189 957.54838993586 77.558 2 0.23668526663608427 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8', 'NARS2-ALG8|2|fusion', 'NARS2-ALG8|1|fusion', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 89755 6419 REYWNEQSA True NCI_RA007_Epitope_Rep3 1181.51015050105 1181.50904993586 32.263 2 0.23666324777263484 0.00036105427849320016 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 60446 22330 LILEPSLYTV True PC9_epitope_Rep5 1146.65362684726 1146.65252993586 90.902 2 0.236661069331379 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'ENST00000553009.5_1_12:54718935-54736154:+|nuORF'] 23895 11411 EYMKHTRLF True PC9_epitope_Rep5 1223.6121134717898 1223.61046490379 48.892 3 0.23665965442846493 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 22270 3676 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 19.19 2 0.23665583077945515 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 14707 9238 DVQM[Oxidation]LQDAISK True H1975_Epitope_Rep3 1262.6176527251398 1262.6165499358601 40.526 2 0.2366509553100741 0.00036105427849320016 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 22008 3977 ESPKEPEQLR True NCI_RA007_Epitope_Rep2 1211.61461556959 1211.6129849037902 20.105 3 0.2366300130769557 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 9773 17103 AYLEAYKEF True PC9_epitope_Rep2 1132.54407639828 1132.5429699358601 71.035 2 0.23662849762833438 0.00036105427849320016 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 105143 14482 STLTEEGVIKV True PC9_epitope_Rep4 1174.64451871554 1174.64342993586 63.615 2 0.23662727598661545 0.00036105427849320016 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 134808 19114 WYQTKFETL True PC9_epitope_Rep1 1214.5971746002997 1214.5960699358602 78.312 2 0.23661918461624432 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 104741 7855 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58082993586 35.19 2 0.2366067906688241 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 47633 20541 IYPHGLVLL True PC9_epitope_Rep3 1023.61170246563 1023.61060993586 84.274 2 0.23660360158051563 0.00036105427849320016 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 9023 8698 AVIGADSVTLK True NCI_RA007_Epitope_Rep5 1072.61282466444 1072.61172993586 40.123 2 0.23659313885384967 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 67266 13106 LTDMTLLHY True H1975_Epitope_Rep2 1105.54778187973 1105.54668993586 55.538 2 0.2365887702396892 0.00036105427849320016 0.9438714419765777 ['CLIP4|p.A344Hfs*6|1|0.23|ENSG00000115295|chr2:29152693-29152693|G/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'ENST00000491701.1_1_2:29355008-29355161:+|nuORF', 'ENSG00000105270|ENST00000360535|CLIP3'] 38624 19132 HHIYLEGTLL True PC9_epitope_Rep3 1194.6397081186199 1194.6386099358601 78.813 2 0.23657825380537004 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 91300 20625 RLYPWGVVEV True PC9_epitope_Rep2 1216.6604435631998 1216.65934993586 84.767 2 0.2365636226740303 0.00036105427849320016 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 75456 20062 NQIEDNDDFQL True PC9_epitope_Rep3 1349.57353860325 1349.57244993586 82.418 2 0.23655997825900665 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 75587 12000 NQQEFVRAL True PC9_epitope_Rep4 1103.5723568347898 1103.5712499358601 53.954 2 0.23655819145232895 0.00036105427849320016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 52074 4029 KLLEGEESR True NCI_RA007_Epitope_Rep2 1059.5560380643099 1059.5549499358601 20.311 2 0.23655071290647744 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 135568 6265 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 29.109 2 0.2365411381725935 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 135705 17286 YEILTPNSIPK True PC9_epitope_Rep5 1273.69180326113 1273.69070993586 71.498 2 0.23653627784008485 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 43357 18413 IHLIDPNTL True PC9_epitope_Rep2 1034.5760452329 1034.57494993586 76.156 2 0.23652374505345466 0.00036105427849320016 0.9438714419765777 ['ENSG00000169251|ENST00000351193|NMD3', 'NMD3|p.E344Kfs*10|1|0.18|ENSG00000169251|chr3:161246345-161246345|G/-|frameshift_variant', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 138989 8262 YSEYPPFSHRY True H1975_Epitope_Rep3 1444.6411646706 1444.64006993586 36.766 2 0.23651853660186276 0.00036105427849320016 0.9438714419765777 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 114477 11990 TSETPDYLLKY True H1975_Epitope_Rep2 1328.6499980188 1328.64890993586 51.201 2 0.23648535741504087 0.00036105427849320016 0.9438714419765777 ['ENSG00000105656|ENST00000262809|ELL'] 123020 20333 VGYDKDFLTI True PC9_epitope_Rep5 1169.5968402471299 1169.59574993586 83.246 2 0.23646915707875524 0.00036105427849320016 0.9438714419765777 ['ENSG00000123066|ENST00000281928|MED13L'] 22060 5083 ESSAGGSFTVR True H1975_Epitope_Rep1 1096.51490152832 1096.51380993586 24.623 2 0.23646313766470892 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000436135.1_1_1:158493653-158493989:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 72290 4129 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 20.976 2 0.236459489108862 0.00036105427849320016 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 109784 5945 THISSQNSEL True PC9_epitope_Rep1 1114.52546621202 1114.52436993586 27.681 2 0.23645215366280956 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 84698 17743 QHFDTIYSI True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 73.531 2 0.23644487450470864 0.00036105427849320016 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 119877 10792 VEVTEFEDIK True NCI_RA007_Epitope_Rep4 1207.59723416995 1207.59612993586 48.36 2 0.2364189411318551 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 42326 10225 IELAYEQVAKA True H1975_Epitope_Rep2 1233.6605031328497 1233.6594099358601 44.335 2 0.23641784425325754 0.00036105427849320016 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 116745 9423 TYLEKAIKI True NCI_RA007_Epitope_Rep4 1077.6433965167298 1077.6422899358602 43.105 2 0.2364162362106196 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 89263 4680 RELEDATETA True H1975_Epitope_Rep2 1133.52004647841 1133.51894993586 23.098 2 0.23640900521648744 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 125901 4658 VNTLIRPDGEK True NCI_RA007_Epitope_Rep5 1240.6775501793197 1240.67590490379 24.602 3 0.236407012492754 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF'] 94798 18358 RYLQTLTTI True PC9_epitope_Rep3 1107.62880908175 1107.6277099358601 75.826 2 0.23638312837206676 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 104215 5339 SSDNATLTHY True H1975_Epitope_Rep2 1107.4832670468702 1107.4821699358602 25.587 2 0.23636137900727608 0.00036105427849320016 0.9438714419765777 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 91630 11881 RPFEDQTSL True PC9_epitope_Rep5 1091.52473793603 1091.52364993586 50.699 2 0.23636029598082947 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 138766 10242 YSDDGQKWTVY True H1975_Epitope_Rep1 1360.5935457718401 1360.59244993586 44.339 2 0.23634606042770132 0.00036105427849320016 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2'] 44345 20096 IMLEALERV True PC9_epitope_Rep5 1072.59506642532 1072.59396993586 82.346 2 0.2363449564525512 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 135599 11012 YEELQSLAGK True PC9_epitope_Rep4 1136.5713537752797 1136.5702499358601 50.134 2 0.2363422290763502 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 137046 19598 YKVEYPIMY True PC9_epitope_Rep1 1204.58383303528 1204.58272993586 80.211 2 0.236313456319583 0.00036105427849320016 0.9438714419765777 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 136652 5690 YIDQEELNK True NCI_RA007_Epitope_Rep3 1150.5506183307 1150.5495299358602 29.362 2 0.2362912080824334 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 47781 12280 IYQRDPLKL True PC9_epitope_Rep5 1144.6604435631998 1144.65934993586 52.223 2 0.23625476756602934 0.00036105427849320016 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 132169 10074 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5287299358602 43.73 2 0.23624650795043106 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 70770 10779 MEEDSIRLP True H1975_Epitope_Rep2 1088.51721002744 1088.5161099358602 46.492 2 0.23624582596056423 0.00036105427849320016 0.9438714419765777 ['ENST00000541426.1_1_12:11803061-11978588:+|nuORF', 'ETV6-LOH12CR1|1|fusion', 'ETV6|p.E361Rfs*10|1|0.26|ENSG00000139083|chr12:11884514-11884514|G/-|frameshift_variant', 'ENSG00000139083|ENST00000396373|ETV6', 'ENST00000544715.1_1_12:11869674-11905524:+|nuORF'] 23578 17564 EYDLIVHQL True PC9_epitope_Rep6 1128.58152453616 1128.5804299358601 80.2 2 0.23623917036027847 0.00036105427849320016 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 92346 7920 RQPDSGISSI True PC9_epitope_Rep4 1058.5356369729 1058.53452993586 37.894 2 0.23623055214377175 0.00036105427849320016 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 24131 7105 EYSKQMQRF True PC9_epitope_Rep5 1215.57064258263 1215.56899490379 32.297 3 0.23622512134582016 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 116685 19264 TYISWKEEL True PC9_epitope_Rep1 1167.58119018299 1167.58008993586 78.901 2 0.23622077799807017 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 74563 8081 NLDDGIDDER True PC9_epitope_Rep4 1160.49456000656 1160.49346993586 38.536 2 0.23621820254506468 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 29388 7999 FVETESVRY True H1975_Epitope_Rep3 1128.54513902744 1128.5440499358601 35.738 2 0.23621191733304434 0.00036105427849320016 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1'] 77342 20668 NYLDQIAKF True PC9_epitope_Rep5 1110.5709598524597 1110.5698699358602 84.554 2 0.23620206376611014 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C'] 91366 5248 RMQKEITAL True NCI_RA007_Epitope_Rep5 1088.60121443492 1088.60010993586 26.883 2 0.2361918286439004 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 101387 21085 SMVEDITGLRL True PC9_epitope_Rep2 1232.6434731697198 1232.6423699358602 86.56 2 0.23618881542774425 0.00036105427849320016 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 116779 20016 TYLPAPEGLKF True PC9_epitope_Rep2 1234.65977485686 1234.6586699358602 82.395 2 0.23618525869297094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 21401 7532 ERM[Oxidation]PEQIRL True PC9_epitope_Rep2 1186.6128421282199 1186.61119490379 34.339 3 0.23616504192398008 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 76038 19365 NRLEEPGNFVL True PC9_epitope_Rep1 1286.6619001151798 1286.66080993586 79.294 2 0.23615971229205832 0.00036105427849320016 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 132695 19220 VYSEAARVLQF True PC9_epitope_Rep2 1281.67173652289 1281.67062993586 79.302 2 0.2361517637928664 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 23387 4399 EVVEEAENGR True NCI_RA007_Epitope_Rep2 1130.5203808315798 1130.5192899358601 21.748 2 0.23613562381723638 0.00036105427849320016 0.9438714419765777 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 137101 10473 YLDDPDLKY True H1975_Epitope_Rep2 1140.5339056374 1140.53280993586 45.302 2 0.23612778886629468 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 75506 19953 NQITQLESL True PC9_epitope_Rep2 1044.54513902744 1044.54457496793 82.148 1 0.23609272183207283 0.00036105427849320016 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 73179 5278 NEEEIRANVA True H1975_Epitope_Rep2 1143.55201531303 1143.55090993586 25.362 2 0.23607849176633144 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 53232 12186 KTEDPDLPAFY True H1975_Epitope_Rep3 1294.6081332068197 1294.60702993586 52.045 2 0.2360763515779449 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 32215 15288 GFGFVTFDDHD True NCI_RA007_Epitope_Rep1 1255.51456717515 1255.51346993586 63.541 2 0.2360754669340039 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 130728 18637 VVDPLNGWMY True H1975_Epitope_Rep2 1192.5586809166 1192.55758993586 77.347 2 0.23607349515255588 0.00036105427849320016 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant'] 107293 13710 SYQRAFNEF True PC9_epitope_Rep2 1160.5250722892 1160.5239699358601 58.025 2 0.23607128744137845 0.00036105427849320016 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 138856 4168 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 21.15 2 0.2360679645382685 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 47453 18704 IYISTLKTEF True PC9_epitope_Rep4 1213.6594405036901 1213.65834993586 80.025 2 0.2360621458788201 0.00036105427849320016 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 109717 16680 THFQLAYRL True PC9_epitope_Rep1 1147.6138277239497 1147.61218490379 68.988 3 0.2360596719399315 0.00036105427849320016 0.9438714419765777 ['ENSG00000106144|ENST00000310447|CASP2', 'nc|ENSG00000106144|P42575-2|CASP2', 'ENST00000493642.5_1_7:142986735-143000877:+|nuORF'] 21850 10479 ESEDPDYYQY True H1975_Epitope_Rep2 1307.48299226335 1307.4818899358602 45.325 2 0.23604461860546566 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 15164 6248 EAESSPFVER True NCI_RA007_Epitope_Rep3 1149.5302172392899 1149.52912993586 31.581 2 0.2360407070243882 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 47534 23427 IYLPYLQNW True PC9_epitope_Rep1 1208.6229954253201 1208.62188993586 94.896 2 0.23602152462435458 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 30059 19646 FYLEGGFSKF True PC9_epitope_Rep4 1193.57571087973 1193.57460993586 83.686 2 0.2360183083494164 0.00036105427849320016 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 139062 7932 YSLDPENPTK True NCI_RA007_Epitope_Rep5 1162.5506183307 1162.5495299358602 37.201 2 0.23601585395773686 0.00036105427849320016 0.9438714419765777 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'ENST00000581091.1_1_18:47017762-47017941:-|nuORF'] 70893 14645 MEIDPSLGV True H1975_Epitope_Rep2 959.46338354943 959.46283496793 61.492 1 0.2360132387244214 0.00036105427849320016 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 37818 14244 HDDYLVMLK True PC9_epitope_Rep4 1132.5586809166 1132.55758993586 62.695 2 0.23601078793729294 0.00036105427849320016 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 132405 19528 VYNEQIRDLL True PC9_epitope_Rep1 1261.6666511424498 1261.66554993586 79.936 2 0.23599395263503595 0.00036105427849320016 0.9438714419765777 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF', 'KIF18A|p.R666Kfs*29|1|0.22|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant'] 28834 5054 FTDKSAEDY True H1975_Epitope_Rep2 1074.4505699362599 1074.4494699358602 24.522 2 0.23599209213756164 0.00036105427849320016 0.9438714419765777 ['ENST00000533568.5_1_11:77069900-77103583:-|nuORF', 'ENSG00000149269|ENST00000356341|PAK1', 'nc|ENSG00000149269|Q13153-2|PAK1'] 7873 6503 ATANQIILK True NCI_RA007_Epitope_Rep5 970.58113061334 970.58002993586 31.679 2 0.235991562977984 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 25404 13839 FEITPPVVLR True H1975_Epitope_Rep3 1169.68084465461 1169.6797499358602 58.54 2 0.2359648117651262 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000434232.1_1_7:36858782-36858980:+|nuORF', 'ENST00000412580.1_1_2:122466160-122466664:-|nuORF'] 91629 11789 RPFEDQTSL True PC9_epitope_Rep5 1091.52473793603 1091.52364993586 50.343 2 0.235955720404229 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 139703 17653 YTVEDIQRL True PC9_epitope_Rep3 1135.5873381925899 1135.58624993586 73.094 2 0.23595549545239397 0.00036105427849320016 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 135292 10256 YCAEIAHNV True PC9_epitope_Rep5 1018.4542158480599 1018.45310993586 44.436 2 0.23594606553712943 0.00036105427849320016 0.9438714419765777 ['ENSG00000144713|ENST00000429711|RPL32', 'ENST00000458542.1_1_3:25791186-25791384:+|nuORF'] 21806 12350 ESDLYSLAHSY True H1975_Epitope_Rep2 1283.5669966708301 1283.56588993586 52.589 2 0.23594241023381887 0.00036105427849320016 0.9438714419765777 ['ENSG00000176046|ENST00000324873|NUPR1', 'nc|ENSG00000176046|O60356-2|NUPR1'] 41857 17621 IDTIEIITDR True PC9_epitope_Rep4 1187.63976768827 1187.6386699358602 75.8 2 0.23593327209449688 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 40878 8825 HVLVTLGEK True PC9_epitope_Rep5 994.58113061334 994.58002993586 38.89 2 0.23593150532335988 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 84715 15547 QHFEFEYQT True PC9_epitope_Rep5 1227.5196525555898 1227.5185499358602 64.812 2 0.23593042274534373 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 133302 12247 WEQDGGRWLP True H1975_Epitope_Rep1 1242.5781704912197 1242.5770699358602 52.131 2 0.23592818279941988 0.00036105427849320016 0.9438714419765777 ['ENSG00000166592|ENST00000299759|RRAD'] 111181 21720 TLFEDSFQQI True PC9_epitope_Rep2 1226.58191845898 1226.58082993586 89.024 2 0.23592070462615547 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'WWP1|p.K872Vfs*4|1|0.15|ENSG00000123124|chr8:86461789-86461790|AA/-|frameshift_variant', 'ENSG00000123124|ENST00000517970|WWP1', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'ITCH-NCOA6|2|fusion', 'nc|ENSG00000289720|Q96J02-3|ITCH'] 72825 18962 NALDKVLSV True PC9_epitope_Rep1 957.54949613189 957.54838993586 77.721 2 0.2359194991773407 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8', 'NARS2-ALG8|2|fusion', 'NARS2-ALG8|1|fusion', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 9775 16383 AYLEAYKEF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 70.978 2 0.2359180844595065 0.00036105427849320016 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 128901 10189 VSTEVDARL True PC9_epitope_Rep5 988.5189242795998 988.51782993586 44.179 2 0.23591702691537708 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 61238 8993 LLDQGQLNKY True H1975_Epitope_Rep2 1190.62953735774 1190.62844993586 39.545 2 0.23591560570360892 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 21121 20772 ERDPVLWSL True PC9_epitope_Rep3 1113.58185888933 1113.5807699358602 85.171 2 0.23591238548779928 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 52654 6137 KQFEKQVEL True NCI_RA007_Epitope_Rep1 1147.6237237013097 1147.62208490379 27.908 3 0.2358995030236255 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 135821 8920 YEQELKDLAA True H1975_Epitope_Rep2 1178.5819184589798 1178.58082993586 39.272 2 0.23589894722892402 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 117199 18639 TYTDVTPRQFF True PC9_epitope_Rep4 1373.6615657620098 1373.6604699358602 79.772 2 0.23589698827843772 0.00036105427849320016 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 23711 19354 EYIKFLRSI True PC9_epitope_Rep3 1167.6651945904698 1167.6640899358601 79.667 2 0.23589412319598593 0.00036105427849320016 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 73936 19574 NHIPVFSPAL True PC9_epitope_Rep3 1093.59202965021 1093.59092993586 80.526 2 0.23588565858444138 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000595844.5_1_19:12787852-12790977:-|nuORF', 'nc|ENSG00000095059|P49366-2|DHPS'] 129191 5953 VTDGPGNYKY True H1975_Epitope_Rep2 1112.51383889916 1112.51274993586 27.881 2 0.23586654506398064 0.00036105427849320016 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 23390 4821 EVVEEAENGR True PC9_epitope_Rep1 1130.5203808315798 1130.5192899358601 23.414 2 0.2358646872135391 0.00036105427849320016 0.9438714419765777 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 101467 5749 SNPALNDNLEK True H1975_Epitope_Rep3 1213.5938801250097 1213.59278993586 27.139 2 0.23586297163407366 0.00036105427849320016 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 52478 9513 KPLEPVSTV True PC9_epitope_Rep5 968.55424715916 968.55314993586 41.55 2 0.2358551448599565 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 69482 7565 LVSESSDVLPK True NCI_RA007_Epitope_Rep5 1172.6288686514001 1172.6277699358602 35.784 2 0.23584989035687845 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 47585 12024 IYNGDMEKI True PC9_epitope_Rep5 1081.51139637101 1081.51028993586 51.244 2 0.23583529153431063 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 124280 10514 VLDELTLAR True H1975_Epitope_Rep1 1028.5866099165999 1028.58550993586 45.394 2 0.23582856050636714 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16723272-16723344:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 67624 5130 LTEVNKTGTQY True H1975_Epitope_Rep3 1252.62993128056 1252.62882993586 24.84 2 0.23579613690014545 0.00036105427849320016 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 76586 5915 NTEEEGLKY True H1975_Epitope_Rep3 1081.4927691014097 1081.49166993586 27.761 2 0.23579117019064322 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 61418 5194 LLEQYKEESK True NCI_RA007_Epitope_Rep2 1265.6503323719696 1265.6486849037901 24.823 3 0.23577476195250058 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 116750 13038 TYLEKAIKI True PC9_epitope_Rep2 1077.6433965167298 1077.6422899358602 55.431 2 0.2357712528074373 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 54103 20630 KYMDVQFDF True PC9_epitope_Rep3 1191.52704643515 1191.5259499358601 84.624 2 0.23576163003016282 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 41067 13018 HYKPTPLYF True PC9_epitope_Rep4 1164.59678067748 1164.59568993586 57.97 2 0.23572504442180883 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 49398 18474 KILDLETQL True PC9_epitope_Rep4 1071.61757569171 1071.61646993586 79.131 2 0.23569107144864831 0.00036105427849320016 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 114851 9115 TTDGKLPEV True PC9_epitope_Rep2 958.4971262058599 958.49602993586 40.401 2 0.23569005962852596 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 138133 21012 YQLDPKFITSI True PC9_epitope_Rep5 1323.7074533252699 1323.70634993586 85.88 2 0.2356763903228498 0.00036105427849320016 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM'] 135606 6715 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep3 1078.5004977145798 1078.49940993586 30.785 2 0.2356522542687939 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 114272 14243 [Acetylation]-TSALENYINR True H1975_Epitope_Rep3 1221.59896582175 1221.5978699358602 60.127 2 0.23564638525483042 0.00036105427849320016 0.9438714419765777 ['ENSG00000128534|ENST00000249299|LSM8'] 53400 5981 KVFAGYYTK True NCI_RA007_Epitope_Rep4 1075.57023157647 1075.56912993586 29.626 2 0.23562434440336294 0.00036105427849320016 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 106860 15381 SYIEHIFEI True NCI_RA007_Epitope_Rep3 1149.57062549929 1149.5695299358601 68.06 2 0.23561778310721437 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 46904 15377 IVIRGLNTI True PC9_epitope_Rep6 997.62841515893 997.62730993586 71.294 2 0.23561479670388794 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 11900 6279 DHQREITSL True PC9_epitope_Rep4 1097.54653600977 1097.54542993586 31.207 2 0.23558104556197396 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'CLIP1|p.E1185Gfs*24|1|0.23|ENSG00000130779|chr12:122309804-122309805|-/T|frameshift_variant'] 48631 11748 KEIQGFLDCAA True H1975_Epitope_Rep2 1193.5750592567301 1193.57396993586 50.264 2 0.2355748931990315 0.00036105427849320016 0.9438714419765777 ['ENSG00000172586|ENST00000372833|CHCHD1'] 41852 18950 IDTIEIITDR True PC9_epitope_Rep1 1187.63976768827 1187.6386699358602 77.674 2 0.23555620115637227 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 94531 19473 RYIFAKNLF True PC9_epitope_Rep5 1170.6549642599398 1170.65332490379 79.956 3 0.2355528553003817 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 4443 14527 AIYDHINEGV True PC9_epitope_Rep5 1129.54038800017 1129.53928993586 60.876 2 0.23554968348569089 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184076|Q9UDW1-2|UQCR10'] 53428 13236 KVIDDTNITRL True PC9_epitope_Rep1 1286.7194149913 1286.7183099358601 55.778 2 0.2355448528733833 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 77320 15155 NYKKFYEQF True PC9_epitope_Rep3 1265.6080736371698 1265.6069699358602 63.436 2 0.2355423864379444 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 138778 11227 YSDDNPYYNY True H1975_Epitope_Rep2 1312.48841199696 1312.4873099358601 48.226 2 0.23554189419113628 0.00036105427849320016 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 48487 5161 KEFEGKTLV True NCI_RA007_Epitope_Rep3 1049.57571087973 1049.57460993586 27.294 2 0.2355299440332078 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 106597 15041 SVYVQLEKV True PC9_epitope_Rep5 1063.5913609438699 1063.59026993586 62.859 2 0.23552592315878948 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 89341 8132 REM[Oxidation]EENFAV True H1975_Epitope_Rep2 1139.49172393603 1139.4906299358602 36.229 2 0.23551309051395417 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 105057 19950 STIRLLTSL True PC9_epitope_Rep5 1002.60734536118 1002.60624993586 81.79 2 0.23550632081457226 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 9595 6806 AYEAELGDAR True NCI_RA007_Epitope_Rep1 1093.50400249145 1093.50290993586 30.482 2 0.23550085861799439 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 72303 9448 MSEERTLLY True H1975_Epitope_Rep2 1140.54851015572 1140.54740993586 41.309 2 0.23549086286273932 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-5|ARHGEF28', 'ENST00000510312.6_1_5:73178320-73193923:+|nuORF'] 133693 20460 WLAEKLPTL True PC9_epitope_Rep3 1069.61718176889 1069.6160899358601 83.955 2 0.23548328737320443 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 87887 9010 QVLSAATIVAK True NCI_RA007_Epitope_Rep4 1099.6601092100298 1099.65900993586 41.491 2 0.2354698188584686 0.00036105427849320016 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 96638 7096 SENEYIMKA True H1975_Epitope_Rep2 1083.4906609264299 1083.4895699358601 32.226 2 0.23545755792686654 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 95472 3857 SALTDKAIVKK True NCI_RA007_Epitope_Rep4 1172.71287305888 1172.71123490379 21.04 3 0.23545254448817562 0.00036105427849320016 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 25847 20266 FGFVTFDDHD True PC9_epitope_Rep2 1198.4931034545798 1198.49200993586 83.373 2 0.23544429139581288 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 88361 19811 QYMKIISSF True PC9_epitope_Rep1 1115.5685173243098 1115.56740993586 81.018 2 0.2354393675710384 0.00036105427849320016 0.9438714419765777 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 125232 7903 VLQSFTVDSSK True H1975_Epitope_Rep1 1209.62411762413 1209.6230299358601 35.35 2 0.2354114786501295 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 96120 9316 SEDSRFITV True H1975_Epitope_Rep3 1052.51383889916 1052.51274993586 40.829 2 0.23541050897046942 0.00036105427849320016 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG'] 53452 9738 KVIDPATATSV True PC9_epitope_Rep4 1100.607739284 1100.60664993586 45.094 2 0.23540420894671177 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 43561 17206 IIEPSLRQL True PC9_epitope_Rep1 1067.6338944621898 1067.63278993586 71.002 2 0.23540414957189373 0.00036105427849320016 0.9438714419765777 ['ENSG00000221983|ENST00000442744|UBA52'] 84653 12535 QHEEFVTSL True PC9_epitope_Rep6 1088.51383889916 1088.51274993586 59.65 2 0.2353884003982821 0.00036105427849320016 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 67470 9975 LTEGPHLYY True H1975_Epitope_Rep2 1091.52876068731 1091.52766993586 43.357 2 0.23538797148842366 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 69836 13249 LYADVGGKQF True PC9_epitope_Rep2 1096.55530978832 1096.5542099358602 56.238 2 0.23538213433420713 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 46387 10530 ITIFEKQEY True H1975_Epitope_Rep2 1169.5968402471299 1169.59574993586 45.525 2 0.23537187051957298 0.00036105427849320016 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 116528 19437 TYEGIFKTL True PC9_epitope_Rep2 1070.56481184286 1070.56370993586 80.144 2 0.23532983355561332 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 76335 7795 NSELLNDRY True H1975_Epitope_Rep3 1122.53055159246 1122.5294499358602 34.966 2 0.23532444999622765 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14'] 23490 23093 EWASRFWLW True PC9_epitope_Rep3 1279.61382772395 1279.6127299358602 94.095 2 0.23531935629684303 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 76758 10014 NTVELLVEDK True H1975_Epitope_Rep3 1158.6132185872598 1158.6121299358601 43.557 2 0.23531635484201444 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 94712 8396 RYLEQLHQL True NCI_RA007_Epitope_Rep5 1198.64585612822 1198.64474993586 38.97 2 0.235299238289248 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 1370 4804 AEEEPNRIPS True H1975_Epitope_Rep2 1140.54111627616 1140.54000993586 23.567 2 0.23529371778222932 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 9835 13518 AYLLNLNHL True NCI_RA007_Epitope_Rep3 1069.59202965021 1069.59092993586 60.462 2 0.23528715909547734 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 131895 18690 VYEEILHQI True PC9_epitope_Rep2 1142.5971746003 1142.5960699358602 77.258 2 0.2352853271633743 0.00036105427849320016 0.9438714419765777 ['ENSG00000135842|ENST00000367511|NIBAN1'] 22188 11916 ETDEKDFYLY True H1975_Epitope_Rep1 1321.5714133449299 1321.57030993586 50.836 2 0.23527766676044432 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 68831 12789 LVDTFLEDVK True H1975_Epitope_Rep3 1177.6230549949698 1177.6219499358601 54.41 2 0.23525227663720905 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 67623 5028 LTEVNKTGTQY True H1975_Epitope_Rep3 1252.62993128056 1252.62882993586 24.461 2 0.23525182480512585 0.00036105427849320016 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 101801 12195 SPIENIQRVA True PC9_epitope_Rep2 1125.6142216467701 1125.6131299358601 52.221 2 0.23524866657624074 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 22151 12638 ESYSVYVYK True PC9_epitope_Rep2 1136.5389910178399 1136.5378899358602 53.922 2 0.23523827051949048 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 104363 21347 SSFPRFYFV True PC9_epitope_Rep1 1148.5654805492 1148.5643899358602 86.942 2 0.23523461790102618 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 30196 20962 FYVPAEPKLAF True PC9_epitope_Rep1 1280.68051030144 1280.6794099358601 85.453 2 0.23522086826192953 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 70149 14577 LYLDEAHSI True PC9_epitope_Rep4 1059.52367530687 1059.52256993586 63.989 2 0.2352187813680281 0.00036105427849320016 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'SPTLC2|p.A351S|1|0.2|ENSG00000100596|chr14:77555425-77555425|C/A|missense_variant'] 89500 4523 REQPPTGGNLA True H1975_Epitope_Rep3 1138.57308511078 1138.57198993586 22.519 2 0.2352108509211725 0.00036105427849320016 0.9438714419765777 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 9452 5610 AVVVPSGEEQR True NCI_RA007_Epitope_Rep1 1169.6040508858898 1169.6029499358601 25.885 2 0.23520607418671083 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000463348.5_1_6:30229165-30231201:+|nuORF', 'ENST00000482052.5_1_6:30229165-30260340:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 105591 9806 SVEEISTLVQK True NCI_RA007_Epitope_Rep5 1231.6659824361097 1231.6648899358602 44.366 2 0.23520144243949284 0.00036105427849320016 0.9438714419765777 ['ENSG00000055950|ENST00000318364|MRPL43', 'nc|ENSG00000055950|Q8N983-3|MRPL43', 'nc|ENSG00000055950|Q8N983-2|MRPL43', 'nc|ENSG00000055950|Q8N983|MRPL43', 'nc|ENSG00000055950|Q8N983-6|MRPL43', 'nc|ENSG00000055950|Q8N983-7|MRPL43'] 7446 6984 ASDKETYELRY True H1975_Epitope_Rep2 1373.64630962069 1373.64466490379 31.787 3 0.2351994836586462 0.00036105427849320016 0.9438714419765777 ['ENSG00000163584|ENST00000295830|RPL22L1'] 69480 7341 LVSESSDVLPK True NCI_RA007_Epitope_Rep3 1172.6288686514001 1172.6277699358602 36.0 2 0.23518958648088892 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 132375 16381 VYMELSQKL True PC9_epitope_Rep5 1109.57908200801 1109.5779899358602 68.006 2 0.23518800527539224 0.00036105427849320016 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 54354 7201 KYQEVTNNL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 36.786 2 0.23518621284264318 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 127119 19104 VQDEFLEKL True PC9_epitope_Rep1 1119.5811901829898 1119.58008993586 78.273 2 0.23516134838956185 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 25613 6340 FETLQAQAGK True NCI_RA007_Epitope_Rep2 1091.5611234447497 1091.56002993586 29.267 2 0.2351579764810115 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 84570 17182 QHDFTSQIF True PC9_epitope_Rep2 1121.51417325233 1121.5130699358601 71.349 2 0.23515486226715543 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 26930 19006 FLHDNMVEI True PC9_epitope_Rep1 1116.52738078832 1116.5262899358602 77.895 2 0.23515271521742784 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3', 'LIG3|p.R614W|1|0.1|ENSG00000005156|chr17:34997754-34997754|C/T|missense_variant', 'ENST00000593099.5_1_17:33324760-33324883:+|nuORF'] 45010 19881 IQLPSEKAIFL True PC9_epitope_Rep4 1257.7332741502898 1257.7321699358602 84.605 2 0.23513229062265245 0.00036105427849320016 0.9438714419765777 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 94122 20481 RWFDKSFTF True PC9_epitope_Rep3 1232.59784330664 1232.5961849037901 84.039 3 0.2351239952500936 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 42954 6465 IGAEVYHNLK True NCI_RA007_Epitope_Rep2 1142.60840799034 1142.6067749037902 29.756 3 0.2351234484306352 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 24236 18050 EYVVMTTHF True PC9_epitope_Rep5 1125.5164817514499 1125.5153899358602 74.444 2 0.23511829329491088 0.00036105427849320016 0.9438714419765777 ['GABRA3|p.A368Lfs*13|2|0.2|ENSG00000011677|chrX:152189771-152189771|C/-|frameshift_variant', 'ENSG00000022355|ENST00000393943|GABRA1', 'ENSG00000011677|ENST00000370314|GABRA3'] 136111 14620 YGEPSEVFINR True PC9_epitope_Rep2 1309.6302656337298 1309.62916993586 61.504 2 0.2351118430917559 0.00036105427849320016 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 104459 8227 SSLNLRETNLD True NCI_RA007_Epitope_Rep3 1260.63099390972 1260.62988993586 39.497 2 0.23510631164051968 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 88463 8943 QYVTQINRL True NCI_RA007_Epitope_Rep4 1133.61930702721 1133.61820993586 41.233 2 0.2350970949066711 0.00036105427849320016 0.9438714419765777 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 96353 10423 SEFTKIITP True NCI_RA007_Epitope_Rep3 1034.5648118428599 1034.56370993586 48.068 2 0.23507940555373893 0.00036105427849320016 0.9438714419765777 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 19983 12650 EMEEKYYRF True PC9_epitope_Rep5 1293.5699738762899 1293.56833490379 53.661 3 0.23507390134431103 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 86476 19671 QQVQRLPFL True PC9_epitope_Rep1 1127.64512785223 1127.64402993586 80.488 2 0.23505364473836232 0.00036105427849320016 0.9438714419765777 ['ENSG00000132963|ENST00000380842|POMP'] 3395 10242 [Acetylation]-AGITTIEAVKR True NCI_RA007_Epitope_Rep2 1199.68738690333 1199.68628993586 44.432 2 0.2350516082790965 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 129198 11230 VTDHLGVVYY True H1975_Epitope_Rep2 1164.58152453616 1164.5804299358601 48.238 2 0.23504319995262335 0.00036105427849320016 0.9438714419765777 ['ENST00000473051.1_1_10:74095570-74096546:-|nuORF', 'ENSG00000148719|ENST00000444643|DNAJB12', 'nc|ENSG00000148719|Q9NXW2-2|DNAJB12'] 140309 13881 YYDPKHVIF True PC9_epitope_Rep4 1180.59169529704 1180.5905899358602 61.293 2 0.23503049896400754 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 40999 21829 HYFDPQYFEF True PC9_epitope_Rep1 1391.58225281215 1391.5811499358601 88.775 2 0.2350174317568511 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I'] 45426 10892 ISDSYFPRY True H1975_Epitope_Rep3 1146.53457434374 1146.53346993586 46.981 2 0.23498657424989297 0.00036105427849320016 0.9438714419765777 ['ENSG00000135862|ENST00000258341|LAMC1'] 12316 8123 DITSDTSGDFR True H1975_Epitope_Rep3 1212.5258601348398 1212.5247699358601 36.222 2 0.2349654684480417 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 69991 19926 LYFHINQTL True PC9_epitope_Rep5 1147.60259433391 1147.6014899358602 81.7 2 0.23495223984812308 0.00036105427849320016 0.9438714419765777 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 83185 14973 PYVNNVPHL True PC9_epitope_Rep1 1051.54507945779 1051.54398993586 62.414 2 0.2349463574170703 0.00036105427849320016 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 53401 5346 KVFAGYYTK True NCI_RA007_Epitope_Rep5 1075.57023157647 1075.56912993586 27.255 2 0.23492936014581065 0.00036105427849320016 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 57412 8839 LEIESQTEEQP True H1975_Epitope_Rep2 1301.5986907219299 1301.59758993586 38.966 2 0.2349290248062639 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 90384 21209 RILDIDIPLSV True PC9_epitope_Rep4 1252.7390878067201 1252.73798993586 89.744 2 0.2349223189679367 0.00036105427849320016 0.9438714419765777 ['ENSG00000115112|ENST00000263707|TFCP2L1'] 53362 4124 KTVPVEAVTSK True NCI_RA007_Epitope_Rep4 1157.6655885132898 1157.66448993586 22.15 2 0.2349140392716543 0.00036105427849320016 0.9438714419765777 ['ERBB2-CTTN|3|fusion', 'ERBB2-CTTN|1|fusion', 'ERBB2-CTTN|4|fusion', 'ERBB2-CTTN|2|fusion', 'ENST00000393747.3_1_11:70269077-70281851:+|nuORF', 'nc|ENSG00000085733|Q14247-3|CTTN', 'ENSG00000085733|ENST00000301843|CTTN', 'nc|ENSG00000085733|Q14247-2|CTTN'] 14309 11089 DTDEYVLKY True H1975_Epitope_Rep2 1144.52882025696 1144.5277299358602 47.688 2 0.23491391907448683 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1'] 7904 7254 ATATANQIILK True NCI_RA007_Epitope_Rep5 1142.66592286646 1142.66482993586 34.58 2 0.23490834103651595 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 96269 10743 SEEQYNKIVIP True H1975_Epitope_Rep3 1318.6768814729799 1318.6757899358602 46.402 2 0.2349041797781729 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 64324 9136 LQNEPLPERL True NCI_RA007_Epitope_Rep3 1207.6560864587498 1207.6549899358602 43.022 2 0.234901347076695 0.00036105427849320016 0.9438714419765777 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 1302 7357 AEDVLSGKVSA True H1975_Epitope_Rep3 1074.55570371114 1074.55460993586 33.274 2 0.23490017745096614 0.00036105427849320016 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 53225 9117 KTDSDSDLQLY True H1975_Epitope_Rep3 1283.58812603823 1283.58702993586 40.057 2 0.23489415753380105 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 22400 15348 ETEVYEGALLY True H1975_Epitope_Rep2 1285.6077988536497 1285.6067099358602 64.194 2 0.23489327761373038 0.00036105427849320016 0.9438714419765777 ['ENSG00000099910|ENST00000328879|KLHL22', 'nc|ENSG00000099910|Q53GT1-3|KLHL22'] 114005 6751 TRLQQAQAL True PC9_epitope_Rep2 1027.5774422152297 1027.5763499358602 31.374 2 0.23486264606567037 0.00036105427849320016 0.9438714419765777 ['ENSG00000267368|ENST00000340457|UPK3BL1'] 53446 11076 KVIDPATATSV True PC9_epitope_Rep1 1100.607739284 1100.60664993586 47.492 2 0.23485502584219245 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 23978 19169 EYPDRIMNTF True PC9_epitope_Rep3 1284.5808729131597 1284.5797699358602 78.952 2 0.23483360954774607 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 69833 13845 LYADVGGKQF True PC9_epitope_Rep1 1096.55530978832 1096.5542099358602 58.096 2 0.2348331285226836 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 7866 7176 ATANQIILK True NCI_RA007_Epitope_Rep2 970.58113061334 970.58002993586 32.534 2 0.23482390686784077 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 18785 8557 ELDRQELTY True H1975_Epitope_Rep2 1165.56151736757 1165.5604299358602 37.871 2 0.23482355071052263 0.00036105427849320016 0.9438714419765777 ['ENSG00000154945|ENST00000285243|ANKRD40'] 94739 21297 RYLMDPDTFTF True PC9_epitope_Rep2 1404.6383877892797 1404.63728993586 87.382 2 0.2348073454547562 0.00036105427849320016 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 107380 17424 SYSPLLREF True PC9_epitope_Rep6 1110.57095985246 1110.5698699358602 79.637 2 0.23480555516786078 0.00036105427849320016 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion', 'ENST00000370677.4_1_20:60920618-60942301:-|nuORF', 'nc|ENSG00000130702|O15230-2|LAMA5'] 28774 7538 FTDEEGYGRY True H1975_Epitope_Rep2 1235.50948179471 1235.5083899358601 33.946 2 0.2348014169324999 0.00036105427849320016 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 47727 13253 IYQKAFDLI True NCI_RA007_Epitope_Rep5 1109.6120963884498 1109.61098993586 57.657 2 0.23479738839502098 0.00036105427849320016 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 92422 10240 RQSGEAFVEL True NCI_RA007_Epitope_Rep4 1134.5669371011797 1134.5658499358601 46.244 2 0.23478991241298272 0.00036105427849320016 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 138839 12181 YSDLHAFYY True H1975_Epitope_Rep3 1177.5080252427301 1177.5069299358602 52.026 2 0.234785333661157 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185090|Q5VSG8-3|MANEAL', 'ENSG00000185090|ENST00000373045|MANEAL'] 52559 13263 KPTETLLNTV True PC9_epitope_Rep2 1114.62338934814 1114.6222899358602 56.29 2 0.23478001879282284 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000407982.6_1_9:125930502-125941310:-|nuORF'] 76971 13825 NVQGIIEILK True H1975_Epitope_Rep3 1125.6757592741699 1125.67466993586 58.483 2 0.23477999333344682 0.00036105427849320016 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC'] 134520 15797 WVDSDQLLY True H1975_Epitope_Rep2 1137.53423999057 1137.5331499358601 65.949 2 0.23477099951724495 0.00036105427849320016 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 129294 5081 VTDRSDARLQY True H1975_Epitope_Rep3 1322.6578773638998 1322.6562449037901 24.661 3 0.23476798917953987 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 107291 9688 SYQRAFNEF True NCI_RA007_Epitope_Rep4 1160.5250722892 1160.5239699358601 44.114 2 0.23476022850928505 0.00036105427849320016 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 132822 10026 VYTGIDHHW True PC9_epitope_Rep2 1126.51959298594 1126.51795490379 43.891 3 0.23475536801537722 0.00036105427849320016 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766226-105766550:+|nuORF'] 23647 20958 EYGKFFVTL True PC9_epitope_Rep1 1102.5698972233 1102.5688099358601 85.438 2 0.23475494428739713 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 14976 14703 DYSSILQKF True NCI_RA007_Epitope_Rep3 1099.55497543515 1099.5538699358601 65.231 2 0.23474921735514015 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 9259 3930 AVQRTLLEK True NCI_RA007_Epitope_Rep3 1056.6291434349198 1056.6280499358602 21.792 2 0.2347453306636733 0.00036105427849320016 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 113078 6575 TPYKQEINA True PC9_epitope_Rep1 1062.53457434374 1062.53346993586 30.094 2 0.2347340053220486 0.00036105427849320016 0.9438714419765777 ['ENSG00000138356|ENST00000374700|AOX1'] 113566 16638 TQYPFDFRGA True PC9_epitope_Rep6 1200.5563724174797 1200.55526993586 76.465 2 0.2347303537101072 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 48967 15725 KEYWFVLTA True NCI_RA007_Epitope_Rep4 1155.59644632431 1155.5953499358602 68.29 2 0.23472455379659884 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 47763 12332 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65934993586 52.292 2 0.23472253865574313 0.00036105427849320016 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 138818 8005 YSDKYFDEHY True H1975_Epitope_Rep1 1365.55134660669 1365.5502499358602 35.735 2 0.2347110454203849 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 91641 6386 RPFQGTM[Oxidation]GV True PC9_epitope_Rep4 1007.4858507099498 1007.48474993586 31.652 2 0.23469219510809594 0.00036105427849320016 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 28442 11937 FSEIDLEKY True H1975_Epitope_Rep1 1142.54955570154 1142.5484499358602 50.919 2 0.23469122728388736 0.00036105427849320016 0.9438714419765777 ['ENSG00000178700|ENST00000314636|DHFR2'] 21802 16606 ESDLPDELLY True H1975_Epitope_Rep2 1192.54994962436 1192.54884993586 69.105 2 0.23468533614666748 0.00036105427849320016 0.9438714419765777 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 13728 13534 DQIYDIFQK True H1975_Epitope_Rep3 1168.5764391557198 1168.57534993586 57.338 2 0.23467972097137169 0.00036105427849320016 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 32224 18732 GFGFVTFDDHD True PC9_epitope_Rep6 1255.51456717515 1255.51346993586 84.694 2 0.23467362110245765 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 69874 15341 LYAPYSTHF True PC9_epitope_Rep4 1097.51819600361 1097.5170899358602 66.941 2 0.23466222867865946 0.00036105427849320016 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 23544 19969 EWSPYTKIFQF True PC9_epitope_Rep6 1444.7027022979998 1444.70160993586 89.473 2 0.23466001980098664 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 101785 11099 SPIENIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 48.016 2 0.23464448665514206 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 54264 13804 KYPLLLQSI True NCI_RA007_Epitope_Rep3 1073.6484818971699 1073.64738993586 61.625 2 0.23464125559494795 0.00036105427849320016 0.9438714419765777 ['ENST00000600274.5_1_19:42396347-42410935:+|nuORF', 'nc|ENSG00000076928|Q92888-2|ARHGEF1', 'ENSG00000076928|ENST00000354532|ARHGEF1', 'nc|ENSG00000076928|Q92888-3|ARHGEF1', 'nc|ENSG00000076928|Q92888-4|ARHGEF1', 'ENST00000595897.5_1_19:42402462-42407822:+|nuORF'] 112307 5977 TM[Oxidation]DNPTTTQY True H1975_Epitope_Rep2 1186.48121882198 1186.48012993586 27.969 2 0.23463684941449858 0.00036105427849320016 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 21103 8637 ERDPQSPEF True PC9_epitope_Rep5 1103.4883524273098 1103.48724993586 38.165 2 0.234635825096023 0.00036105427849320016 0.9438714419765777 ['ENSG00000170903|ENST00000301919|MSANTD4'] 115812 10273 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep5 1134.59546072858 1134.5943699358602 44.502 2 0.23463146803096188 0.00036105427849320016 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 42324 10126 IELAYEQVAKA True H1975_Epitope_Rep1 1233.6605031328497 1233.6594099358601 43.886 2 0.23462451466458475 0.00036105427849320016 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 43120 9873 IGNLNTLVVK True H1975_Epitope_Rep3 1069.64954452633 1069.64844993586 43.005 2 0.23462175258366746 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 83060 21535 PYLFHVVTF True PC9_epitope_Rep5 1121.59096702105 1121.5898699358602 87.87 2 0.2346189820651787 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 140491 20293 YYIFIPSKF True PC9_epitope_Rep4 1176.6219327961599 1176.62082993586 86.2 2 0.23461733829406306 0.00036105427849320016 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 77224 12036 NYIEKVVAI True NCI_RA007_Epitope_Rep4 1047.59644632431 1047.5953499358602 53.297 2 0.2345995492165504 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 40374 6726 HRTELETKL True PC9_epitope_Rep5 1125.61422164677 1125.61258490379 30.842 3 0.23458036005677044 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 40682 4527 HTLNQIDSVK True PC9_epitope_Rep4 1153.6091362663299 1153.60802993586 23.902 2 0.234546851932947 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 72687 15241 MYKLSSEQF True PC9_epitope_Rep1 1131.52704643515 1131.5259499358601 63.444 2 0.23454156744597143 0.00036105427849320016 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 4725 17203 ALDTM[Oxidation]NFDVIK True PC9_epitope_Rep5 1281.62748913285 1281.62638993586 71.191 2 0.2345224000532741 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 65423 2727 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 14.57 2 0.2345080744095188 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 132274 12820 VYLDKFIRL True NCI_RA007_Epitope_Rep3 1165.68593003505 1165.68427490379 57.67 3 0.23450580943995367 0.00036105427849320016 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 7120 5390 AQYEEIAQR True NCI_RA007_Epitope_Rep4 1106.5356369728997 1106.53452993586 27.301 2 0.23449825655302167 0.00036105427849320016 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6C|p.R349Q|1|0.16|ENSG00000170465|chr12:52471163-52471163|C/T|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 5438 7531 ALYDATYETK True H1975_Epitope_Rep3 1173.5553693579702 1173.55426993586 33.95 2 0.2344942084291495 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 89169 5336 REIAQDFKT True NCI_RA007_Epitope_Rep4 1106.5720224816198 1106.57092993586 27.089 2 0.23448945566164603 0.00036105427849320016 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'H3C11|p.D82N|1|0.1|ENSG00000275379|chr6:27872072-27872072|C/T|missense_variant', 'H3C11|p.D82H|1|0.28|ENSG00000275379|chr6:27872072-27872072|C/G|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 47255 16524 IYENRIYSL True PC9_epitope_Rep5 1169.6080736371698 1169.6069699358602 68.56 2 0.2344717499469725 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF', 'ENST00000430836.1_1_20:3342707-3342845:-|nuORF', 'ENST00000397758.2_1_3:175436135-175436456:-|nuORF'] 108082 11099 TDLLLEPYNK True H1975_Epitope_Rep1 1204.6339540318397 1204.6328499358601 47.656 2 0.2344709569563559 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 22193 12121 ETDEKDFYLY True H1975_Epitope_Rep3 1321.5714133449299 1321.57030993586 51.791 2 0.2344685020648528 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 106864 15934 SYIEHIFEI True NCI_RA007_Epitope_Rep4 1149.57062549929 1149.5695299358601 69.158 2 0.23443387038742813 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 115128 11210 TTYLVLDEADR True NCI_RA007_Epitope_Rep2 1294.6404959642598 1294.6393899358602 48.188 2 0.2344296194467405 0.00036105427849320016 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 92268 8869 RQLDTETNL True PC9_epitope_Rep1 1088.5462016566 1088.5451099358602 38.954 2 0.23442675392278794 0.00036105427849320016 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant'] 79085 21229 PFVDHVFTF True PC9_epitope_Rep1 1107.53893144819 1107.5378299358601 86.481 2 0.2344236488325317 0.00036105427849320016 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 107779 18678 TAM[Oxidation]DVVYAL True PC9_epitope_Rep4 997.4790339940099 997.47792993586 79.925 2 0.23442340917229276 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 94143 19325 RWFQPAIPSW True PC9_epitope_Rep6 1286.6560268890996 1286.65492993586 86.983 2 0.2344112636518767 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 97068 10688 SEYLRYEDTL True H1975_Epitope_Rep1 1287.59829679911 1287.5971899358601 46.07 2 0.23438962586979675 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 139280 5274 YTDHQNSSSYY True H1975_Epitope_Rep2 1363.5316737912701 1363.53056993586 25.354 2 0.23438053131821032 0.00036105427849320016 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 129026 7229 VTADVINAAEK True NCI_RA007_Epitope_Rep2 1129.59790287629 1129.5968099358602 32.739 2 0.23437233332775442 0.00036105427849320016 0.9438714419765777 ['PHGDH-HMGCS2|1|fusion', 'ENST00000496756.1_1_1:120254528-120263945:+|nuORF', 'ENSG00000092621|ENST00000641023|PHGDH'] 22330 11007 ETEGPHVLLY True H1975_Epitope_Rep3 1156.5764391557198 1156.57534993586 47.427 2 0.23436769464350724 0.00036105427849320016 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'ENST00000485263.5_1_6:31998272-32000090:+|nuORF', 'ENST00000468936.5_1_6:31999682-32002424:+|nuORF', 'CON__P01030'] 71723 5369 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 25.718 2 0.23436529017821142 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 116175 6157 TVTISQVSDNK True NCI_RA007_Epitope_Rep1 1190.61428121642 1190.6131899358602 27.987 2 0.2343633308004657 0.00036105427849320016 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 41846 12114 IDTIEIITDR True H1975_Epitope_Rep3 1187.63976768827 1187.6386699358602 51.761 2 0.23434933332263383 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 83174 10514 PYTKVEESF True PC9_epitope_Rep4 1098.5233409536997 1098.5222499358601 48.164 2 0.23433513105742365 0.00036105427849320016 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 95841 4915 [Acetylation]-SDKPDM[Oxidation]AEIEK True NCI_RA007_Epitope_Rep1 1319.5914978632497 1319.59038993586 23.199 2 0.23433366915197512 0.00036105427849320016 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 9910 11657 AYPHNLMTF True NCI_RA007_Epitope_Rep3 1092.50625142092 1092.5051499358601 52.972 2 0.23433300917427413 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 41847 12655 IDTIEIITDR True NCI_RA007_Epitope_Rep1 1187.63976768827 1187.6386699358602 53.207 2 0.2343103606592492 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 61274 9048 LLDTAQKNLY True H1975_Epitope_Rep2 1177.63428838501 1177.6331899358602 39.756 2 0.23430721434928684 0.00036105427849320016 0.9438714419765777 ['ENSG00000142556|ENST00000270649|ZNF614', 'nc|ENSG00000142556|Q8N883-2|ZNF614', 'ZNF614|p.H205Mfs*46|1|0.32|ENSG00000142556|chr19:52016985-52016985|G/-|frameshift_variant'] 35607 12439 GTLDYILQR True NCI_RA007_Epitope_Rep2 1077.5818588893299 1077.5807699358602 52.994 2 0.23429232391346763 0.00036105427849320016 0.9438714419765777 ['ENSG00000140718|ENST00000471389|FTO'] 110975 8615 TLDDESLKY True H1975_Epitope_Rep2 1082.5131701928199 1082.5120699358602 38.094 2 0.23428285922348038 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 118665 13180 VEAQLQELQVK True PC9_epitope_Rep2 1283.7085159544297 1283.7074099358601 55.971 2 0.234278535272229 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 88418 12369 QYSDINNRW True PC9_epitope_Rep1 1194.5417849825 1194.5406899358602 52.436 2 0.23427794656045853 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 114332 15511 TSDDPWLTAY True H1975_Epitope_Rep2 1167.5084191655499 1167.50732993586 64.819 2 0.23427787201926809 0.00036105427849320016 0.9438714419765777 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 137188 12769 YLDWAYRSGGY True H1975_Epitope_Rep2 1349.6040508858898 1349.6029499358601 54.219 2 0.23427105284955838 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 104218 9269 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 40.608 2 0.234234577412155 0.00036105427849320016 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 7972 7741 ATDLTREVY True H1975_Epitope_Rep1 1066.5294889632999 1066.52838993586 34.735 2 0.23423226244963863 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 73909 16882 NHIEPLKIQL True PC9_epitope_Rep1 1203.6975573479099 1203.69592490379 69.76 3 0.23422213726499597 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 119813 7035 VEVILQHSA True NCI_RA007_Epitope_Rep5 994.5447451046201 994.54364993586 33.738 2 0.23418471132477542 0.00036105427849320016 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'ENST00000472714.1_1_7:107569804-107570089:-|nuORF'] 105001 10946 STIFYYVQK True NCI_RA007_Epitope_Rep5 1147.5913609438696 1147.59026993586 48.742 2 0.23417998196541476 0.00036105427849320016 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 25832 19615 FGFEITHEV True PC9_epitope_Rep1 1077.51311062317 1077.51200993586 80.276 2 0.23417947439599926 0.00036105427849320016 0.9438714419765777 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 119360 13050 VENIQVFDFK True H1975_Epitope_Rep3 1237.6342883850095 1237.6331899358602 55.437 2 0.2341760255473689 0.00036105427849320016 0.9438714419765777 ['ENSG00000198074|ENST00000359579|AKR1B10', 'nc|ENSG00000227471|C9JRZ8|AKR1B15', 'ENSG00000227471|ENST00000457545|AKR1B15'] 65385 8899 LSERADWQY True H1975_Epitope_Rep2 1166.5356369729 1166.53452993586 39.197 2 0.23417418689847058 0.00036105427849320016 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 24832 14894 FDAGELITQR True PC9_epitope_Rep6 1148.5825871653199 1148.5814899358602 69.282 2 0.23417363168602406 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 111081 8401 TLEDPDLNVR True H1975_Epitope_Rep1 1170.5880664685799 1170.58696993586 37.242 2 0.23415599319514185 0.00036105427849320016 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1', 'ENST00000540319.5_1_12:67701199-67704144:+|nuORF'] 52334 22303 KPFDLVIPFA True PC9_epitope_Rep1 1145.64848189717 1145.64738993586 90.6 2 0.23415201545271094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 107305 9612 SYRDSYESY True PC9_epitope_Rep3 1168.4672826295598 1168.46618993586 41.923 2 0.23414495162956228 0.00036105427849320016 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 127366 11944 VQPSKYHFL True PC9_epitope_Rep5 1117.5920296502102 1117.59092993586 50.941 2 0.23412903031404741 0.00036105427849320016 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 37959 7313 HEFGRLLST True NCI_RA007_Epitope_Rep3 1058.55089311422 1058.5497899358602 35.883 2 0.23412899273974458 0.00036105427849320016 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'ENST00000478436.1_1_3:145794517-145794673:-|nuORF', 'nc|ENSG00000152952|O00469-3|PLOD2'] 14091 13077 DSDSDLQLY True H1975_Epitope_Rep3 1054.44548455582 1054.44497496793 55.544 1 0.23412714192394884 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 129901 5857 VTLTSEEEAR True NCI_RA007_Epitope_Rep1 1133.5564319871298 1133.55532993586 26.835 2 0.2341240088608302 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 53749 11481 KYFDEHYEY True PC9_epitope_Rep2 1292.53496826656 1292.53333490379 49.481 3 0.23412197741058574 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 135700 11678 YEILTPNSIPK True NCI_RA007_Epitope_Rep1 1273.69180326113 1273.69070993586 49.399 2 0.23411109454753232 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 137327 22138 YLIPDIDLKL True PC9_epitope_Rep1 1201.69582601241 1201.69472993586 89.967 2 0.23410012451722104 0.00036105427849320016 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 93527 5341 RSNPYYIVK True NCI_RA007_Epitope_Rep5 1138.61349337078 1138.6123899358602 27.235 2 0.23409578746359977 0.00036105427849320016 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.D681Mfs*9|1|0.2|ENSG00000108055|chr10:110596475-110596475|G/-|frameshift_variant'] 70913 19005 [Acetylation]-M[Oxidation]ELITILEK True H1975_Epitope_Rep1 1146.62061316356 1146.6195099358602 79.232 2 0.2340942003396639 0.00036105427849320016 0.9438714419765777 ['ENSG00000108424|ENST00000290158|KPNB1'] 107279 19230 SYQKVIELF True PC9_epitope_Rep4 1125.6070110080097 1125.6059099358602 82.068 2 0.23409341131505973 0.00036105427849320016 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 77348 20233 NYLHLDYNF True PC9_epitope_Rep2 1197.5454733806098 1197.54436993586 83.244 2 0.2340913687155866 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 24741 17087 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.4960299358602 70.975 2 0.23408670508160168 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 39361 8945 HLVDEPQNLIK True NCI_RA007_Epitope_Rep2 1304.7088503076 1304.7077499358602 39.416 2 0.2340791999080107 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 71571 9196 MLDSHEELY True H1975_Epitope_Rep3 1135.48557554599 1135.48446993586 40.364 2 0.23405923953944555 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 71753 14336 [Acetylation]-M[Oxidation]M[Oxidation]PTPVILLK True H1975_Epitope_Rep3 1215.66070453417 1215.65960993586 60.491 2 0.2340557546044354 0.00036105427849320016 0.9438714419765777 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'ENST00000464397.1_1_2:73461506-73466971:+|nuORF'] 76482 10620 NTDFYQTSY True H1975_Epitope_Rep1 1137.46146897313 1137.4603699358602 45.806 2 0.23405569906218202 0.00036105427849320016 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 71702 4593 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 22.772 2 0.2340552006836062 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 64470 12666 LQTSIREEI True PC9_epitope_Rep1 1087.5873381925899 1087.58624993586 53.591 2 0.23404102670365906 0.00036105427849320016 0.9438714419765777 ['PMF1|p.Q83H|1|0.2|ENSG00000160783|chr1:156232407-156232407|G/T|missense_variant', 'nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 26030 21280 FHDHALMIIF True PC9_epitope_Rep1 1242.6219498795 1242.62029490379 86.679 3 0.23404064613739023 0.00036105427849320016 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 4200 21057 AIDPHLLLSV True PC9_epitope_Rep5 1076.6229954253201 1076.62188993586 86.055 2 0.2340341268944951 0.00036105427849320016 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 24245 12075 EYYEALPELK True NCI_RA007_Epitope_Rep2 1253.6179696145298 1253.6168699358602 51.561 2 0.23402285127156092 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000532107.2_1_14:51374946-51378571:-|nuORF'] 118307 12211 VDDGLISLQVK True NCI_RA007_Epitope_Rep2 1185.6605031328502 1185.6594099358601 52.097 2 0.2340212304117003 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 47728 19948 IYQKAFDLI True PC9_epitope_Rep5 1109.6120963884498 1109.61098993586 81.785 2 0.2340140433197172 0.00036105427849320016 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 23166 6305 EVPAVPETLKK True H1975_Epitope_Rep1 1209.69688864157 1209.6952349037902 29.319 3 0.23401243060835727 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7'] 11745 13537 DHHENKYLLL True PC9_epitope_Rep5 1280.65133543148 1280.6496749037901 57.092 3 0.23401064708980412 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 89510 4691 REQVTATPRIA True H1975_Epitope_Rep3 1240.6887835693599 1240.68712490379 23.167 3 0.23399762003682578 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169607|Q8IYA6-2|CKAP2L', 'nc|ENSG00000169607|Q8IYA6-3|CKAP2L', 'ENSG00000169607|ENST00000302450|CKAP2L'] 3195 7487 AGELTEDEVER True PC9_epitope_Rep2 1246.5677249468197 1246.5666299358602 34.17 2 0.23399585730061387 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 23981 17814 EYPDRIMNTF True PC9_epitope_Rep4 1284.5808729131597 1284.5797699358602 76.555 2 0.23398911230598565 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 83606 5585 QDVDNASLAR True PC9_epitope_Rep3 1087.52580056519 1087.52470993586 26.561 2 0.23398572187703293 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 34735 4774 GQNPTNAEVLK True NCI_RA007_Epitope_Rep3 1169.6040508858898 1169.6029499358601 25.741 2 0.2339818165302345 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 47826 21131 IYSIDFTRF True PC9_epitope_Rep5 1160.5866099165999 1160.58550993586 86.342 2 0.23397543804535184 0.00036105427849320016 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B'] 131851 17076 VYAVIPAEKF True PC9_epitope_Rep4 1135.62774645259 1135.62664993586 73.679 2 0.2339708589973994 0.00036105427849320016 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 47829 16797 IYSPQFSRL True PC9_epitope_Rep5 1109.5869442697701 1109.58584993586 69.618 2 0.23396881129214908 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000071909|Q8WXR4-6|MYO3B', 'ENST00000409940.6_1_2:171034716-171376051:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-3|MYO3B', 'nc|ENSG00000071909|Q8WXR4-5|MYO3B', 'nc|ENSG00000071909|Q8WXR4-2|MYO3B', 'ENST00000438642.6_1_2:171034716-171400468:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-4|MYO3B', 'ENSG00000071909|ENST00000408978|MYO3B', 'nc|ENSG00000071909|Q8WXR4-7|MYO3B', 'ENST00000602629.1_1_2:171225816-171400468:+|nuORF'] 53745 12729 KYFDEHYEY True PC9_epitope_Rep1 1292.53496826656 1292.5338699358601 53.836 2 0.23395555392362882 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 64305 21662 LQMEPAAFQAL True PC9_epitope_Rep1 1217.61144476545 1217.61034993586 88.152 2 0.23394191067396428 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 73639 16128 NGISDLVKV True PC9_epitope_Rep6 943.53384606775 943.53274993586 74.379 2 0.23392418739555906 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 104762 13663 STDNFTRILEY True H1975_Epitope_Rep3 1357.65139500113 1357.6502899358602 57.846 2 0.23392272625174756 0.00036105427849320016 0.9438714419765777 ['ENSG00000161638|ENST00000293379|ITGA5', 'ITGA5|p.A504Pfs*12|1|0.15|ENSG00000161638|chr12:54404201-54404201|G/-|frameshift_variant'] 14054 11805 DSDHLTIYNAY True H1975_Epitope_Rep2 1310.5778957077 1310.57678993586 50.484 2 0.23391957699134666 0.00036105427849320016 0.9438714419765777 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 57870 8126 LEQERILNP True H1975_Epitope_Rep2 1110.6033226099 1110.6022299358601 36.207 2 0.23391668467804114 0.00036105427849320016 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 69671 14966 LVVYPWTQRF True NCI_RA007_Epitope_Rep4 1307.7026427283497 1307.7015499358602 65.032 2 0.23390528652607107 0.00036105427849320016 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070', 'ENSG00000213934|ENST00000330597|HBG1', 'ENSG00000213931|ENST00000396895|HBE1', 'ENSG00000196565|ENST00000336906|HBG2', 'CON__Q3SX09'] 23805 12639 EYLENALKL True NCI_RA007_Epitope_Rep3 1091.58627556343 1091.5851699358602 56.96 2 0.23389976407804072 0.00036105427849320016 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7', 'ENSG00000183347|ENST00000370456|GBP6'] 96102 6878 SEDPTDDSRLP True H1975_Epitope_Rep2 1230.53642481854 1230.53532993586 31.376 2 0.23389440894812677 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 73893 5104 NHHLQETSF True PC9_epitope_Rep4 1111.50467119779 1111.50356993586 26.287 2 0.23386672596112837 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 33982 16786 GNFNYIEFTR True PC9_epitope_Rep6 1259.5934862021898 1259.5923899358602 77.069 2 0.23386366941045073 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 39954 9175 HQQSIPAVL True NCI_RA007_Epitope_Rep4 991.5450794577898 991.5439899358599 42.131 2 0.23386173002771565 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 84565 16881 QHDFQAPYL True PC9_epitope_Rep3 1117.5192586327698 1117.5181699358602 70.089 2 0.23385777338213887 0.00036105427849320016 0.9438714419765777 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 73927 16763 NHIEPLKIQL True PC9_epitope_Rep5 1203.6975573479099 1203.69592490379 69.483 3 0.23385731375126578 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 76331 5445 NSELGSETRY True H1975_Epitope_Rep2 1154.52038083158 1154.5192899358601 25.971 2 0.23382646691193934 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-7|YY1AP1', 'ENST00000442834.6_1_1:155629450-155640310:-|nuORF'] 123293 14579 VHSEQVFAL True PC9_epitope_Rep4 1028.5290950404797 1028.5279899358602 63.996 2 0.2338241303806263 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 53900 20073 KYIENLDNITF True PC9_epitope_Rep2 1368.6925315371197 1368.69142993586 82.616 2 0.23381610322439372 0.00036105427849320016 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 28260 21300 FRVDYILSV True PC9_epitope_Rep5 1110.60734536118 1110.6062499358602 86.982 2 0.2337998329757554 0.00036105427849320016 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 92086 13188 RPTEVLAGTQL True PC9_epitope_Rep2 1183.6560864587498 1183.6549899358602 56.003 2 0.23379408858899284 0.00036105427849320016 0.9438714419765777 ['ENSG00000101255|ENST00000217233|TRIB3'] 85037 19646 QIIRELQVL True PC9_epitope_Rep1 1110.67609362734 1110.6749899358601 80.393 2 0.23379364730966556 0.00036105427849320016 0.9438714419765777 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'MAP2K1|p.R108Q|1|0.29|ENSG00000169032|chr15:66436777-66436777|G/A|missense_variant', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 67450 7563 LTEDKETLQY True H1975_Epitope_Rep3 1238.60304782638 1238.6019499358601 34.072 2 0.23378658041156986 0.00036105427849320016 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'TUBGCP2|p.S354Vfs*53|1|0.11|ENSG00000130640|chr10:133292653-133292654|-/C|frameshift_variant'] 104738 8048 STDKFKTDFY True H1975_Epitope_Rep2 1250.58191845898 1250.58028490379 35.907 3 0.23377641466446764 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 138403 13245 YRDPTTVTTL True PC9_epitope_Rep1 1165.59790287629 1165.5968099358602 55.812 2 0.2337687005837871 0.00036105427849320016 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 24064 8931 EYQKVGQSF True PC9_epitope_Rep5 1084.5189242795998 1084.5178299358602 39.297 2 0.2337533267711211 0.00036105427849320016 0.9438714419765777 ['ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0-3|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 29623 22670 FVLPELPSV True PC9_epitope_Rep2 999.56408356687 999.56298993586 92.695 2 0.23375059506116336 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 108476 18622 TEESFIPLTI True H1975_Epitope_Rep2 1148.5965058939598 1148.59540993586 77.289 2 0.23374251722126205 0.00036105427849320016 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 2352 7804 AEQEPTAEQLA True H1975_Epitope_Rep2 1185.55134660669 1185.5502499358602 34.965 2 0.23371884608459373 0.00036105427849320016 0.9438714419765777 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'nc|ENSG00000141522|P52565-2|ARHGDIA'] 36041 8606 GVDSSIFQNPK True NCI_RA007_Epitope_Rep4 1190.59315184902 1190.5920499358601 39.886 2 0.23371238321269014 0.00036105427849320016 0.9438714419765777 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 126687 17758 VPRPAVLDPAL True PC9_epitope_Rep5 1146.67609362734 1146.6749899358601 73.325 2 0.23369575671035828 0.00036105427849320016 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 27842 21376 FQLEHIMDL True PC9_epitope_Rep1 1144.5586809166 1144.55758993586 87.055 2 0.23369290960107117 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 996 8038 AEAEFYRQV True H1975_Epitope_Rep2 1111.5298233164701 1111.5287299358602 35.868 2 0.23368776964459792 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENST00000442018.5_2_X:39911364-39913101:-|nuORF'] 53772 14559 KYFEKQFEL True PC9_epitope_Rep2 1230.6284747285797 1230.62683490379 61.272 3 0.23366893526287558 0.00036105427849320016 0.9438714419765777 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 65462 16216 LSFETTEESLR True PC9_epitope_Rep1 1310.63541058382 1310.63430993586 67.192 2 0.23364546097514063 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 111606 10692 TLNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 1189.6376598937302 1189.63656993586 45.58 2 0.23362841929738185 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 83598 4740 QDVDNASLAR True NCI_RA007_Epitope_Rep1 1087.52580056519 1087.52470993586 22.518 2 0.2336156764576609 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 109940 7450 THSDIQVKL True PC9_epitope_Rep4 1039.56620882519 1039.5651099358602 36.009 2 0.23361331744609143 0.00036105427849320016 0.9438714419765777 ['ENSG00000105223|ENST00000409735|PLD3', 'EGLN2-PLD3|1|fusion'] 77201 12531 NYGRVFSEW True NCI_RA007_Epitope_Rep5 1156.53015766964 1156.5290699358602 54.854 2 0.2335814375952989 0.00036105427849320016 0.9438714419765777 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 116752 14608 TYLEKAIKI True PC9_epitope_Rep3 1077.6433965167298 1077.6422899358602 61.321 2 0.23357731454089878 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 10936 3794 DAVTYTEHAK True NCI_RA007_Epitope_Rep2 1133.53530261973 1133.5342099358602 19.394 2 0.23357376224047532 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 14316 10238 DTDHYFLRY True H1975_Epitope_Rep1 1228.5512870370399 1228.5496349037899 44.324 3 0.2335722873424755 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 92364 8202 RQPYAVSEL True NCI_RA007_Epitope_Rep3 1061.5505587610498 1061.54946993586 39.395 2 0.23356783049437158 0.00036105427849320016 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 53231 12083 KTEDPDLPAFY True H1975_Epitope_Rep3 1294.6081332068197 1294.60702993586 51.641 2 0.23356297658658742 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 88261 20673 QYFDSRGMFI True PC9_epitope_Rep1 1262.5753936098997 1262.5742899358602 84.342 2 0.23353100684876774 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18', 'ENST00000497508.1_1_2:669582-669891:-|nuORF'] 40491 5613 HSERHVLLY True H1975_Epitope_Rep2 1152.60399131624 1152.60235490379 26.593 3 0.23352759089132064 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 40582 13489 HTDDPLTWDY True H1975_Epitope_Rep2 1261.52513185885 1261.5240299358602 57.019 2 0.233508994796898 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 125674 9953 VMSQALKATF True NCI_RA007_Epitope_Rep4 1094.5794163611797 1094.57830993586 45.128 2 0.2335018563996099 0.00036105427849320016 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2'] 116667 15868 TYIPVPAKI True PC9_epitope_Rep4 1000.5957180483199 1000.59462993586 68.966 2 0.23350009860862825 0.00036105427849320016 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 96850 3702 SESPKEPEQLR True H1975_Epitope_Rep3 1298.64664397386 1298.6449949037901 19.299 3 0.23348840728230594 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 92286 15032 RQLESLIRL True PC9_epitope_Rep4 1126.6822416369398 1126.68058490379 65.753 3 0.23348595836641872 0.00036105427849320016 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4', 'nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 70112 19084 LYIVEPLKF True PC9_epitope_Rep6 1120.6532329244399 1120.65212993586 86.051 2 0.23348316038487768 0.00036105427849320016 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 52804 13037 KQTDVLQQL True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 55.427 2 0.23347341703060126 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 96634 5699 SENEYIM[Oxidation]KA True H1975_Epitope_Rep3 1099.4855759264299 1099.48446993586 26.951 2 0.23346929835456656 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 90007 13543 RGDLPFVVPR True PC9_epitope_Rep4 1154.6560268890998 1154.65438490379 59.989 3 0.23346807360063881 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 40537 14617 HSQFLGYPITL True H1975_Epitope_Rep1 1274.6659228664598 1274.66482993586 61.435 2 0.2334581406385794 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 138411 13164 YRDPTTVTTL True PC9_epitope_Rep5 1165.59790287629 1165.5968099358602 55.64 2 0.23345594166388356 0.00036105427849320016 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 131887 20688 VYDVVELKF True PC9_epitope_Rep1 1110.5961119711399 1110.5950099358602 84.4 2 0.2334529456718834 0.00036105427849320016 0.9438714419765777 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 87397 11330 QTDPVTLQY True H1975_Epitope_Rep1 1063.51858992643 1063.51748993586 48.559 2 0.23342398352976718 0.00036105427849320016 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 124692 19725 VLITTDLLAR True PC9_epitope_Rep1 1113.6757592741699 1113.67466993586 80.7 2 0.2334129314021835 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000494445.1_1_3:186505247-186506105:+|nuORF', 'ENST00000461021.1_1_3:186505247-186505672:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1'] 109502 16773 THAAEDIVYTL True PC9_epitope_Rep4 1231.6084675599898 1231.60736993586 72.484 2 0.23341141830604037 0.00036105427849320016 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 123019 19347 VGYDKDFLTI True PC9_epitope_Rep4 1169.5968402471299 1169.59574993586 82.528 2 0.23340253800688004 0.00036105427849320016 0.9438714419765777 ['ENSG00000123066|ENST00000281928|MED13L'] 118372 9427 VDINAPDVDVR True H1975_Epitope_Rep1 1211.61461556959 1211.61350993586 41.173 2 0.2334003324588233 0.00036105427849320016 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 40599 9185 HTDMADIEQY True H1975_Epitope_Rep3 1221.49720285885 1221.4961099358602 40.32 2 0.23338831892008063 0.00036105427849320016 0.9438714419765777 ['ENSG00000185818|ENST00000423729|NAT8L', 'NAT8L|p.H202Tfs*77|1|0.12|ENSG00000185818|chr4:2063820-2063820|C/-|frameshift_variant'] 70999 14181 M[Oxidation]EQPLDLTHIV True H1975_Epitope_Rep2 1310.65403823386 1310.65294993586 59.699 2 0.23336526575524366 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 22981 16456 EVIKELAQI True PC9_epitope_Rep4 1041.6070110080097 1041.6059099358602 71.266 2 0.23335301531936856 0.00036105427849320016 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 138775 11133 YSDDNPYYNY True H1975_Epitope_Rep1 1312.48841199696 1312.4873099358601 47.79 2 0.23335167758420677 0.00036105427849320016 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 131873 19534 VYDPSLKTLL True PC9_epitope_Rep2 1147.64887581999 1147.6477699358602 80.521 2 0.2333344954187488 0.00036105427849320016 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 114835 12026 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.4974899358601 51.268 2 0.2333315492176183 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 89372 8459 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 37.522 2 0.2333193466150184 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 105183 3925 STNPFRPQK True NCI_RA007_Epitope_Rep4 1073.56179215109 1073.5606899358602 21.329 2 0.23331830446413113 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133136|A0A804HLA8|GNG5B', 'ENSG00000174021|ENST00000370645|GNG5'] 39374 11385 HLVDEPQNLIK True PC9_epitope_Rep4 1304.7088503076 1304.7072149037901 51.565 3 0.23327238574742412 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 135883 11662 YESEWTNEV True H1975_Epitope_Rep2 1155.47203365683 1155.47092993586 49.93 2 0.23326041869629022 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.K581N|1|0.19|ENSG00000151348|chr11:44232433-44232433|G/T|missense_variant'] 135589 4917 YEELQQTAGR True H1975_Epitope_Rep3 1193.5676653771698 1193.5665699358601 24.042 2 0.23324330927786455 0.00036105427849320016 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q922U2'] 40686 6325 HTLNQIDSVK True PC9_epitope_Rep5 1153.6091362663299 1153.60750490379 29.304 3 0.233237973077624 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 6802 5982 AQFKGTQSL True NCI_RA007_Epitope_Rep4 978.51344497634 978.51234993586 29.63 2 0.23323711769153846 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR'] 69012 7481 LVHELDEAEYR True NCI_RA007_Epitope_Rep1 1372.6622940379998 1372.6606349037902 33.091 3 0.2332293254921785 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1'] 104989 8977 STIEYVIQR True NCI_RA007_Epitope_Rep4 1107.59242357303 1107.5913299358601 41.365 2 0.23322837729058243 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 137222 12044 YLEQLHQLY True H1975_Epitope_Rep3 1205.60807363717 1205.6069699358602 51.488 2 0.23321831659495593 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 132909 19363 VYTTTVHWL True PC9_epitope_Rep3 1118.5760452329 1118.57494993586 79.703 2 0.23321804316070768 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 65167 14488 LSDTKYLEMIY True H1975_Epitope_Rep2 1374.6741045916601 1374.6730099358601 60.885 2 0.2332147169571823 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 132478 9994 VYPDGIRHI True PC9_epitope_Rep1 1068.5716285587998 1068.5705299358601 43.308 2 0.23321129122359843 0.00036105427849320016 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 29261 19315 FVDGLTFKV True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 82.402 2 0.23320507298012264 0.00036105427849320016 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 30083 19948 FYNLLTRTF True PC9_epitope_Rep4 1173.61824439805 1173.6171499358602 84.865 2 0.23319503707416292 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 6704 4956 AQDEERQASL True PC9_epitope_Rep1 1145.53127986845 1145.53018993586 23.923 2 0.23318476514048117 0.00036105427849320016 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT'] 106400 16967 SVTDLAFKV True PC9_epitope_Rep6 978.5385970950199 978.53750993586 77.809 2 0.23318450316136605 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 132449 10741 VYNSEYYHF True NCI_RA007_Epitope_Rep5 1220.5138388991602 1220.51274993586 47.952 2 0.23317999621622137 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 53877 9995 KYIDQKFVL True NCI_RA007_Epitope_Rep4 1152.6542955536 1152.6531899358602 45.291 2 0.2331786932903583 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 29352 17832 FVEEEEHFL True PC9_epitope_Rep5 1177.52915461013 1177.52804993586 73.61 2 0.23317837529958219 0.00036105427849320016 0.9438714419765777 ['ENSG00000168159|ENST00000305943|RNF187'] 94407 13562 RYFDPANGKF True PC9_epitope_Rep5 1213.5880068989297 1213.58635490379 57.188 3 0.23316245226701793 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 112528 8806 TPAEVGVLVGK True H1975_Epitope_Rep3 1068.6179100448796 1068.6168099358601 38.879 2 0.23314895946341094 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 37449 21529 GWYDEEHPLVF True PC9_epitope_Rep1 1390.6193665968601 1390.61826993586 87.64 2 0.23314470825923392 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 24410 13799 FAFQAEVNR True PC9_epitope_Rep3 1080.53524305008 1080.5341499358601 58.155 2 0.23314181839883746 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000559111.1_1_15:99797871-99798159:+|nuORF'] 2965 17968 AFIEKHWTF True PC9_epitope_Rep5 1177.59202965021 1177.59092993586 74.131 2 0.2331412337289865 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 93643 7358 RTEPFQDGY True H1975_Epitope_Rep3 1111.4934378077498 1111.4923499358601 33.278 2 0.23314099819901601 0.00036105427849320016 0.9438714419765777 ['ENSG00000164543|ENST00000319357|STK17A'] 106121 8138 SVNNSIFYR True NCI_RA007_Epitope_Rep3 1098.54580773378 1098.54470993586 39.119 2 0.2331185179319654 0.00036105427849320016 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 137564 5593 YLSEVASGDNK True NCI_RA007_Epitope_Rep1 1181.5564319871298 1181.55532993586 25.82 2 0.23310759240360235 0.00036105427849320016 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF'] 89748 5581 REYQVKLQA True NCI_RA007_Epitope_Rep5 1133.61930702721 1133.61820993586 28.154 2 0.2331038366601111 0.00036105427849320016 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 140483 15272 YYIFIPSKF True NCI_RA007_Epitope_Rep3 1176.6219327961599 1176.62082993586 67.621 2 0.23309447482070528 0.00036105427849320016 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 135781 7489 YENEVALRQ True PC9_epitope_Rep2 1120.5512870370399 1120.55018993586 34.178 2 0.23309098209277426 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 89012 6820 REEDLDAVEA True H1975_Epitope_Rep3 1145.52004647841 1145.51894993586 31.186 2 0.23308891806783177 0.00036105427849320016 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF'] 81795 11668 PSEYDTPLY True H1975_Epitope_Rep2 1083.47605640811 1083.47547496793 49.953 1 0.23308764526705458 0.00036105427849320016 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3', 'SETD3|p.Y313Lfs*18|1|0.19|ENSG00000183576|chr14:99405358-99405359|-/A|frameshift_variant'] 2095 10641 AELNEFLTR True H1975_Epitope_Rep1 1091.56112344475 1091.56002993586 45.887 2 0.2330871583081518 0.00036105427849320016 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 87349 8396 QTDDTWRTEY True H1975_Epitope_Rep2 1313.55240923585 1313.5513099358602 37.249 2 0.2330866151576763 0.00036105427849320016 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 54089 21283 KYMDINFDF True PC9_epitope_Rep1 1191.52704643515 1191.5259499358601 86.69 2 0.23308571113244583 0.00036105427849320016 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 140449 17941 YYFPVKNVI True PC9_epitope_Rep6 1141.6171817688898 1141.6160899358601 81.637 2 0.23308285020731148 0.00036105427849320016 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 130953 17604 VVITEKGISDL True PC9_epitope_Rep1 1172.66525416012 1172.66414993586 72.507 2 0.23307870655650675 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 134807 19021 WYQTKFETL True PC9_epitope_Rep1 1214.5971746002997 1214.5960699358602 77.955 2 0.23306509232142503 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 54278 8848 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 39.386 3 0.23305290229956235 0.00036105427849320016 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 75976 14014 NRHYYSITI True PC9_epitope_Rep1 1165.58800689893 1165.58635490379 58.743 3 0.23304433103253747 0.00036105427849320016 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 8743 10557 AVDSLVPIGR True NCI_RA007_Epitope_Rep1 1025.58694426977 1025.58584993586 45.048 2 0.23303697039671867 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 136872 20107 YIYDKDMEII True PC9_epitope_Rep3 1301.6213407428097 1301.62024993586 82.593 2 0.23302191851410645 0.00036105427849320016 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 7853 9755 ATALEYVYK True NCI_RA007_Epitope_Rep2 1056.54916177872 1056.5480699358602 42.566 2 0.2330157089793022 0.00036105427849320016 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 29183 7770 FVAEPDNKNVY True H1975_Epitope_Rep2 1294.61936659686 1294.61826993586 34.835 2 0.23300342936207247 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 71315 11963 MHFESGSTL True PC9_epitope_Rep5 1007.43823143075 1007.43712993586 51.012 2 0.23299294470195867 0.00036105427849320016 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 89442 10483 REPYELTVPA True H1975_Epitope_Rep2 1173.60298825673 1173.60188993586 45.341 2 0.2329914234065483 0.00036105427849320016 0.9438714419765777 ['ENSG00000157110|ENST00000397323|RBPMS', 'nc|ENSG00000157110|Q93062-2|RBPMS', 'nc|ENSG00000157110|Q93062-3|RBPMS'] 106151 16276 SVPDPELIKTV True PC9_epitope_Rep4 1196.66525416012 1196.66414993586 70.561 2 0.2329718887150914 0.00036105427849320016 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 135594 8920 YEELQSLAGK True NCI_RA007_Epitope_Rep1 1136.5713537752797 1136.5702499358601 38.698 2 0.23297050526760157 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 129213 4535 VTDKSMVDKY True H1975_Epitope_Rep3 1184.5747249035599 1184.57308490379 22.566 3 0.23296846862884918 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 114890 8656 TTEESLRNYY True H1975_Epitope_Rep2 1274.5778957077 1274.57678993586 38.254 2 0.23296402732407906 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 135225 14529 YAYDGKDYL True PC9_epitope_Rep3 1106.4920408254197 1106.49094993586 61.007 2 0.232955224061443 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 35776 5213 GTVIHFNNPK True NCI_RA007_Epitope_Rep5 1125.59309227937 1125.59143490379 26.748 3 0.23295483238195605 0.00036105427849320016 0.9438714419765777 ['RGNEF-BTF3|1|fusion', 'nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 72356 8663 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 38.281 2 0.23294923491471764 0.00036105427849320016 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 22272 3837 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 19.867 2 0.2329426601104213 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 17879 9170 EIDGGLETLR True H1975_Epitope_Rep1 1101.56660274801 1101.56550993586 40.177 2 0.2329377593486732 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105379|P38117-2|ETFB', 'ENSG00000105379|ENST00000309244|ETFB', 'ENST00000594361.1_1_19:51849976-51850294:-|nuORF'] 73415 12378 NESFGFTADLR True NCI_RA007_Epitope_Rep2 1255.5833154413099 1255.5822099358602 52.753 2 0.23292784958998064 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 38562 18979 HHFEWIQKL True PC9_epitope_Rep3 1236.64037682496 1236.63874490379 78.225 3 0.23292243431924625 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 83059 20492 PYLFHVVTF True PC9_epitope_Rep4 1121.59096702105 1121.5898699358602 86.971 2 0.2329184011400419 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 22401 15242 ETEVYEGALLY True H1975_Epitope_Rep3 1285.6077988536497 1285.6067099358602 64.036 2 0.23291537424209569 0.00036105427849320016 0.9438714419765777 ['ENSG00000099910|ENST00000328879|KLHL22', 'nc|ENSG00000099910|Q53GT1-3|KLHL22'] 84136 5879 QEQRLQGEVVA True H1975_Epitope_Rep2 1255.65206370747 1255.65096993586 27.599 2 0.23291262987236597 0.00036105427849320016 0.9438714419765777 ['ENSG00000161654|ENST00000293406|LSM12', 'nc|ENSG00000161654|Q3MHD2-2|LSM12'] 140707 18341 YYQEYPMSI True PC9_epitope_Rep6 1192.5110620178398 1192.50996993586 83.192 2 0.23291183836461443 0.00036105427849320016 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 89356 8544 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 37.79 2 0.23290619119561304 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 2354 7923 AEQEPTAEQLA True H1975_Epitope_Rep3 1185.55134660669 1185.5502499358602 35.445 2 0.23289868165058303 0.00036105427849320016 0.9438714419765777 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'nc|ENSG00000141522|P52565-2|ARHGDIA'] 117912 12791 VAQLEQVYIR True PC9_epitope_Rep6 1217.6768219033297 1217.67572993586 60.698 2 0.23288303938847793 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 108651 5895 TELDAKTVTA True H1975_Epitope_Rep2 1047.54480467427 1047.54370993586 27.661 2 0.23287059333083418 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43212370-43220777:-|nuORF'] 8517 9485 [Acetylation]-ATVQQLEGR True H1975_Epitope_Rep1 1042.54072266964 1042.5396299358601 41.404 2 0.23286506225947923 0.00036105427849320016 0.9438714419765777 ['ENSG00000164687|ENST00000297258|FABP5'] 6552 5692 APVNVTTEVK True H1975_Epitope_Rep3 1056.58152453616 1056.5804299358601 26.925 2 0.23286503561473765 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 53239 14781 KTETEPVFWYY True H1975_Epitope_Rep1 1461.6816325002499 1461.68052993586 62.08 2 0.2328635597660821 0.00036105427849320016 0.9438714419765777 ['ENST00000564111.5_1_16:12070663-12146080:+|nuORF', 'nc|ENSG00000048471|Q8TEQ0-2|SNX29', 'ENSG00000048471|ENST00000566228|SNX29'] 45566 14101 ISGLIYEETR True PC9_epitope_Rep1 1179.6135529404298 1179.61244993586 59.068 2 0.23284190215219355 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 45113 13242 IQTAVRLLL True NCI_RA007_Epitope_Rep5 1025.6597152872098 1025.65860993586 57.616 2 0.23281566172360033 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC4|p.R93G|1|0.26|ENSG00000278588|chr6:26123628-26123628|T/C|missense_variant', 'H2BC4|p.E94D|1|0.3|ENSG00000278588|chr6:26123623-26123623|C/A|missense_variant', 'H2BC7|p.E94D|1|0.38|ENSG00000277224|chr6:26199840-26199840|G/C|missense_variant', 'H2BC21|p.P104L|1|0.5|ENSG00000184678|chr1:149886330-149886330|G/A|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 48898 9461 KEVDLIPKV True NCI_RA007_Epitope_Rep4 1039.62774645259 1039.62664993586 43.25 2 0.23280454794917133 0.00036105427849320016 0.9438714419765777 ['FAM21A-LURAP1L|1|fusion', 'nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A', 'ENST00000492914.1_1_10:51829372-51845265:+|nuORF', 'FAM21C-LURAP1L|1|fusion', 'FAM21C-LURAP1L|2|fusion', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C'] 7436 9271 ASDDFDQASY True H1975_Epitope_Rep3 1117.4199980839699 1117.41890993586 40.654 2 0.23279728331277916 0.00036105427849320016 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 119015 12677 VEFTRSLFVN True NCI_RA007_Epitope_Rep4 1210.6346227381798 1210.63352993586 55.802 2 0.23278145679518292 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 129266 13645 VTDPTGFLRM True H1975_Epitope_Rep3 1135.5695799534699 1135.56848993586 57.776 2 0.2327622386621596 0.00036105427849320016 0.9438714419765777 ['ENSG00000100154|ENST00000397906|TTC28'] 132451 16279 VYNSEYYHF True PC9_epitope_Rep1 1220.5138388991602 1220.51274993586 67.438 2 0.23276031212650522 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 72353 8408 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 37.294 2 0.23274624935633076 0.00036105427849320016 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 72716 19748 MYPYIFHVL True PC9_epitope_Rep6 1181.59433814933 1181.59324993586 88.621 2 0.23274334919645612 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 22250 2766 ETDPDAQAKAY True H1975_Epitope_Rep2 1207.5356965425499 1207.5345899358601 14.668 2 0.23274130289459635 0.00036105427849320016 0.9438714419765777 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 43863 17713 ILDEAIYKV True PC9_epitope_Rep1 1062.5961119711399 1062.5950099358602 72.928 2 0.2327376735555676 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 89256 6926 RELAQQVQQVA True NCI_RA007_Epitope_Rep5 1268.68369818892 1268.68260993586 33.327 2 0.23272555123999702 0.00036105427849320016 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 107129 17731 SYMLVNENRF True PC9_epitope_Rep3 1271.5968573304701 1271.59576993586 73.399 2 0.232716526295702 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 25827 8528 FGESDELIGQK True H1975_Epitope_Rep1 1221.5877321154096 1221.5866299358602 37.731 2 0.23271504197806908 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 18301 12533 EITALAPSTMK True PC9_epitope_Rep5 1160.61111041228 1160.61000993586 53.207 2 0.2327106133346655 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 132715 20032 VYSFGFERL True PC9_epitope_Rep2 1116.56039516876 1116.55928993586 82.457 2 0.23270227091525778 0.00036105427849320016 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 29674 19855 FVNDIFERI True PC9_epitope_Rep4 1151.59750895347 1151.59640993586 84.502 2 0.2326959444780114 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 77248 19700 NYINDLRNF True PC9_epitope_Rep1 1167.56727145435 1167.5661699358602 80.601 2 0.23269413051657437 0.00036105427849320016 0.9438714419765777 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 38536 12990 HHEFLQQSL True PC9_epitope_Rep1 1137.55670677065 1137.55560993586 54.837 2 0.23268153279238188 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 140486 21319 YYIFIPSKF True PC9_epitope_Rep1 1176.6219327961599 1176.62082993586 86.831 2 0.23267627115975295 0.00036105427849320016 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 23534 17929 EWSPYTKIFQF True NCI_RA007_Epitope_Rep2 1444.7027022979998 1444.70160993586 74.476 2 0.232675805581518 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 75351 13150 NQAKYIPEL True PC9_epitope_Rep6 1074.57095985246 1074.5698699358602 62.223 2 0.23267431819941684 0.00036105427849320016 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 140522 12197 YYITTRVQF True NCI_RA007_Epitope_Rep4 1189.6131590176099 1189.61206993586 53.91 2 0.23267220447251505 0.00036105427849320016 0.9438714419765777 ['ENSG00000000938|ENST00000374005|FGR'] 138551 15964 YRNDYATML True PC9_epitope_Rep5 1145.51754438061 1145.51644993586 66.395 2 0.23266839421499388 0.00036105427849320016 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2', 'ENST00000460886.1_1_21:47532344-47532792:+|nuORF'] 96881 6629 SESWTSHTV True H1975_Epitope_Rep3 1032.4512386426 1032.45014993586 30.452 2 0.2326649012603858 0.00036105427849320016 0.9438714419765777 ['ATG4C|p.D145N|2|0.36|ENSG00000125703|chr1:62819043-62819043|G/A|missense_variant', 'ENSG00000125703|ENST00000317868|ATG4C'] 436 15294 AALQELLSK True PC9_epitope_Rep2 971.5651461960299 971.56404993586 64.107 2 0.23265923387817014 0.00036105427849320016 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 35741 4818 GTTHNFLYK True NCI_RA007_Epitope_Rep3 1079.5399940773498 1079.5388899358602 25.92 2 0.23264828631697185 0.00036105427849320016 0.9438714419765777 ['ENST00000599239.5_1_19:48565437-48599986:-|nuORF', 'ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'PLA2G4C|p.I518Sfs*2|1|0.08|ENSG00000105499|chr19:48053015-48053024|TCTCTAAGGA/-|frameshift_variant', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C'] 69220 16881 LVNELTEFAK True PC9_epitope_Rep2 1162.6233893481399 1162.6222899358602 70.179 2 0.23262565263482363 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 76492 12582 NTDGFLLPKY True H1975_Epitope_Rep3 1166.5971746003 1166.5960699358602 53.6 2 0.23261559966246384 0.00036105427849320016 0.9438714419765777 ['ENST00000536234.1_1_11:63991488-63991698:-|nuORF', 'ENST00000541928.1_1_11:63991350-63991698:-|nuORF', 'nc|ENSG00000149743|Q86TN4-2|TRPT1', 'ENSG00000149743|ENST00000317459|TRPT1', 'nc|ENSG00000149743|Q86TN4-4|TRPT1'] 4206 11803 AIDQLHLEY True H1975_Epitope_Rep2 1100.5502244078798 1100.54912993586 50.476 2 0.23260869437130438 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 94627 7817 RYLDKTEQW True NCI_RA007_Epitope_Rep2 1237.6091362663299 1237.60802993586 35.035 2 0.23260646774228297 0.00036105427849320016 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 94637 22169 RYLDLFTNF True PC9_epitope_Rep1 1187.59750895347 1187.59640993586 90.09 2 0.23258569162224924 0.00036105427849320016 0.9438714419765777 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'KDELR3|p.F122Lfs*15|1|0.31|ENSG00000100196|chr22:38481225-38481228|TCTC/-|frameshift_variant'] 76332 5407 NSELGSETRY True H1975_Epitope_Rep3 1154.52038083158 1154.5192899358601 25.86 2 0.23257496795025526 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-7|YY1AP1', 'ENST00000442834.6_1_1:155629450-155640310:-|nuORF'] 69861 16934 LYANM[Oxidation]FERL True PC9_epitope_Rep5 1171.56958033391 1171.56848993586 70.152 2 0.23257416503908868 0.00036105427849320016 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 11702 5818 DHFASVHSV True PC9_epitope_Rep4 997.46174375665 997.46064993586 29.238 2 0.23257201547584913 0.00036105427849320016 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 42822 17762 IFKPPDPDNTF True PC9_epitope_Rep5 1289.62920300457 1289.62810993586 73.34 2 0.23257158356895574 0.00036105427849320016 0.9438714419765777 ['ENSG00000165943|ENST00000298894|MOAP1'] 109895 5417 THNPTNATL True PC9_epitope_Rep1 967.47230844035 967.47120993586 25.67 2 0.23256777475208829 0.00036105427849320016 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 45578 12015 ISGLIYEETR True PC9_epitope_Rep6 1179.6135529404298 1179.61244993586 57.502 2 0.2325546200706203 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 35814 4649 GTYHGMTLK True NCI_RA007_Epitope_Rep4 1006.49060135678 1006.48950993586 24.299 2 0.23255290752929647 0.00036105427849320016 0.9438714419765777 ['ENSG00000134371|ENST00000367435|CDC73'] 131836 19581 VYAQVARLF True PC9_epitope_Rep5 1065.5971150306498 1065.5960099358601 80.37 2 0.23254789557122396 0.00036105427849320016 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 44043 20632 ILLDLTDNRL True PC9_epitope_Rep5 1184.6764875501601 1184.67538993586 84.413 2 0.23253707800485407 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 139377 5385 YTDVSTRY True H1975_Epitope_Rep3 1003.46107505031 1003.45996993586 25.78 2 0.2325357235453166 0.00036105427849320016 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 1809 5469 AEIDEEPVSKA True H1975_Epitope_Rep2 1186.5717476981001 1186.57064993586 26.064 2 0.2325182667275388 0.00036105427849320016 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000550343.1_1_12:57108115-57108487:-|nuORF', 'ENST00000419462.1_1_8:102381113-102381542:+|nuORF'] 21398 12390 ERMPEQIRL True PC9_epitope_Rep5 1170.61792712822 1170.61627490379 52.655 3 0.2325169706610645 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 116955 15574 TYPIKTPTF True PC9_epitope_Rep4 1066.5698972233001 1066.5688099358601 67.825 2 0.23249838144985788 0.00036105427849320016 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 76595 9096 NTERTVWQY True H1975_Epitope_Rep2 1195.56218607391 1195.56108993586 39.938 2 0.23249127593261784 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000179295|Q06124-3|PTPN11', 'ENSG00000179295|ENST00000351677|PTPN11', 'nc|ENSG00000179295|Q06124-1|PTPN11'] 87427 13870 QTEEDYTLTMY True H1975_Epitope_Rep3 1392.5755127492 1392.57440993586 58.66 2 0.23248757504196588 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166206|P28472-3|GABRB3'] 15043 7731 EAAENSLVAYK True NCI_RA007_Epitope_Rep1 1193.5928174958497 1193.59172993586 34.065 2 0.23248604644926033 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE'] 92465 12683 RQYFQEIGL True NCI_RA007_Epitope_Rep4 1152.5927579262 1152.5916699358602 55.83 2 0.23248344798935286 0.00036105427849320016 0.9438714419765777 ['ENSG00000110328|ENST00000227756|GALNT18'] 132458 16108 VYNSEYYHF True PC9_epitope_Rep5 1220.5138388991602 1220.51274993586 66.949 2 0.23248313411866633 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 132374 15033 VYMELSQKL True PC9_epitope_Rep4 1109.57908200801 1109.5779899358602 65.757 2 0.23246473291319683 0.00036105427849320016 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 114873 10674 TTDPYLTNSY True H1975_Epitope_Rep3 1173.5189838492502 1173.51847496793 46.131 1 0.23246175816226172 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 52756 15245 KQM[Oxidation]EQISQFL True PC9_epitope_Rep4 1266.62782348602 1266.62672993586 66.568 2 0.2324530265177694 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 54318 19698 KYPSPFFVF True PC9_epitope_Rep6 1130.5800679841798 1130.5789699358602 88.425 2 0.2324318187478863 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 57660 13601 LEMDLKDLEA True NCI_RA007_Epitope_Rep5 1175.57439055039 1175.5732899358602 59.003 2 0.23242251830015603 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 89355 8411 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 37.28 2 0.23241949947010548 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 71712 5607 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 26.569 2 0.2324189042431163 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 27109 20907 FLQEQLVEL True PC9_epitope_Rep4 1117.60192562757 1117.60082993586 88.578 2 0.23241056047635494 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant'] 91492 4884 RNVSTGDVNVE True NCI_RA007_Epitope_Rep5 1188.5734790335998 1188.5723899358602 25.48 2 0.23240674662004893 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 53230 12276 KTEDPDLPAFY True H1975_Epitope_Rep2 1294.6081332068197 1294.60702993586 52.303 2 0.23239441363065716 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 771 6947 AAYEAELGDAR True H1975_Epitope_Rep3 1164.54111627616 1164.54000993586 31.683 2 0.23239330360450142 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 4201 19026 AIDPHLLLSV True PC9_epitope_Rep6 1076.6229954253201 1076.62188993586 85.826 2 0.232390770721759 0.00036105427849320016 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 84693 17679 QHFDSVMQL True PC9_epitope_Rep5 1103.5069796969099 1103.50588993586 73.016 2 0.23234964059211435 0.00036105427849320016 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 71370 8733 MIDETRNSLY True H1975_Epitope_Rep2 1240.5757875327201 1240.57468993586 38.553 2 0.232346600858636 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 57205 8914 LEEVTGKLQVA True H1975_Epitope_Rep3 1185.66050313285 1185.6594099358601 39.287 2 0.23234469101117064 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 135472 7810 YEDATKITV True H1975_Epitope_Rep2 1038.5233409537 1038.5222499358601 34.988 2 0.23233399825661213 0.00036105427849320016 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 104986 8672 STIEYVIQR True NCI_RA007_Epitope_Rep3 1107.59242357303 1107.5913299358601 41.192 2 0.2323331914743107 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 92366 8489 RQPYAVSEL True NCI_RA007_Epitope_Rep5 1061.5505587610498 1061.54946993586 39.337 2 0.23232996198183983 0.00036105427849320016 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 96639 7049 SENEYIMKA True H1975_Epitope_Rep3 1083.4906609264299 1083.4895699358601 32.079 2 0.2323241140280187 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 89017 10207 REEDPYMDTTL True H1975_Epitope_Rep3 1368.5867461392397 1368.5856499358601 44.306 2 0.23231347194118615 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 140590 16903 YYLTPDGQRF True PC9_epitope_Rep1 1258.59823722946 1258.5971499358602 69.842 2 0.2323124332207763 0.00036105427849320016 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 70039 13217 LYGRHFNYL True PC9_epitope_Rep2 1181.59817765981 1181.5970899358601 56.117 2 0.23230910609383434 0.00036105427849320016 0.9438714419765777 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 16919 6595 EGDLIAAQAR True NCI_RA007_Epitope_Rep1 1042.54072235334 1042.5396299358601 29.667 2 0.23229768290064642 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 138955 9711 YSELASHVVSY True H1975_Epitope_Rep2 1253.59281749585 1253.59172993586 42.338 2 0.23228974820871376 0.00036105427849320016 0.9438714419765777 ['ENSG00000065618|ENST00000648076|COL17A1', 'nc|ENSG00000065618|Q9UMD9-2|COL17A1'] 135185 17426 YAVDAYFREA True PC9_epitope_Rep2 1203.55603806431 1203.5549499358601 72.283 2 0.2322802965686546 0.00036105427849320016 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 135371 10048 YDGIILPGK True NCI_RA007_Epitope_Rep5 974.54368247546 974.54258993586 45.289 2 0.23228017063982292 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 132360 21093 VYMDWYEKF True PC9_epitope_Rep1 1279.5583465634297 1279.5577749679298 85.964 1 0.23224159835146113 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 119764 6701 VETTEDLVAK True NCI_RA007_Epitope_Rep1 1103.5710194221099 1103.56992993586 30.076 2 0.2322357319891311 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105379|P38117-2|ETFB', 'ENSG00000105379|ENST00000309244|ETFB'] 61115 13567 LLDDAQRLLY True H1975_Epitope_Rep1 1218.66083748602 1218.6597499358602 57.311 2 0.23222191104060427 0.00036105427849320016 0.9438714419765777 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000523439.1_1_19:57999318-58003198:+|nuORF', 'nc|ENSG00000152439|Q6PK81-2|ZNF773', 'ENSG00000152439|ENST00000282292|ZNF773', 'nc|ENSG00000105136|Q96HQ0-6|ZNF419', 'nc|ENSG00000105136|Q96HQ0-2|ZNF419', 'nc|ENSG00000105136|Q96HQ0-3|ZNF419', 'nc|ENSG00000105136|Q96HQ0-4|ZNF419', 'ENSG00000105136|ENST00000221735|ZNF419', 'nc|ENSG00000105136|Q96HQ0-5|ZNF419', 'ENSG00000083814|ENST00000317398|ZNF671'] 15298 5360 EAIEGTYIDKK True NCI_RA007_Epitope_Rep5 1265.6503323719696 1265.6486849037901 27.307 3 0.23222009534142427 0.00036105427849320016 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF'] 116692 14938 TYITSVSRL True PC9_epitope_Rep3 1038.57095985246 1038.5698699358602 62.592 2 0.23219321157041112 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 96455 11286 SEIPKLPAV True NCI_RA007_Epitope_Rep4 952.5593325395998 952.55822993586 50.307 2 0.23218513395301324 0.00036105427849320016 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 34731 4907 GQNPTNAEVLK True H1975_Epitope_Rep3 1169.6040508858898 1169.6029499358601 24.002 2 0.2321726351031323 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 94861 14043 RYNESLTNF True PC9_epitope_Rep5 1142.5356369729 1142.53452993586 59.031 2 0.23216980718440844 0.00036105427849320016 0.9438714419765777 ['ENSG00000113300|ENST00000261951|CNOT6'] 54277 8756 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 39.037 3 0.23216092389713278 0.00036105427849320016 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 71722 5273 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 25.365 2 0.23214388710851358 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 8101 5516 ATELTHEDY True H1975_Epitope_Rep3 1077.46146897313 1077.4603699358602 26.265 2 0.23212187489867034 0.00036105427849320016 0.9438714419765777 ['ENSG00000165916|ENST00000298852|PSMC3'] 108600 16927 TEIIILATR True PC9_epitope_Rep5 1028.62299542532 1028.62188993586 70.126 2 0.2321184432334823 0.00036105427849320016 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 24038 15730 EYQDLLNVK True PC9_epitope_Rep1 1120.5764391557198 1120.57534993586 65.328 2 0.23211629586129792 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 27641 23237 FQAEIAQLMSL True PC9_epitope_Rep5 1249.63765951329 1249.63656993586 94.365 2 0.23210049518879652 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 88358 17473 QYM[Oxidation]ERLQLL True PC9_epitope_Rep5 1208.62234418276 1208.62124993586 72.212 2 0.23209967099987916 0.00036105427849320016 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 81794 11651 PSEYDTPLY True H1975_Epitope_Rep1 1083.47605640811 1083.4749499358602 49.806 2 0.23209743214851344 0.00036105427849320016 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3', 'SETD3|p.Y313Lfs*18|1|0.19|ENSG00000183576|chr14:99405358-99405359|-/A|frameshift_variant'] 86984 19190 QRVWAEYAL True PC9_epitope_Rep5 1134.5821932425 1134.58108993586 78.853 2 0.23209668574325096 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 58707 20400 LFKNDPLFF True PC9_epitope_Rep4 1139.6015317047497 1139.6004299358601 86.616 2 0.23207665729299262 0.00036105427849320016 0.9438714419765777 ['ENSG00000103642|ENST00000261893|LACTB', 'nc|ENSG00000103642|P83111-2|LACTB'] 72417 10213 MTEPRMLQY True H1975_Epitope_Rep2 1167.54165095347 1167.54054993586 44.289 2 0.23206728940961183 0.00036105427849320016 0.9438714419765777 ['ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 27329 11037 FMDPGPEGKLY True H1975_Epitope_Rep3 1252.579810284 1252.5787099358602 47.543 2 0.23205702516226406 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 123530 21145 VIIDQLPDL True PC9_epitope_Rep4 1024.580461907 1024.57936993586 89.497 2 0.23204171753232755 0.00036105427849320016 0.9438714419765777 ['ENSG00000162337|ENST00000294304|LRP5', 'PPP6R3-LRP5|6|fusion', 'PPP6R3-LRP5|5|fusion', 'ENST00000529993.5_1_11:68154039-68171824:+|nuORF', 'nc|ENSG00000290796|A4QPB2-2|LRP5L', 'nc|ENSG00000290796|A4QPB2|LRP5L', 'ENSG00000070018|ENST00000261349|LRP6', 'LRP6|p.L805Ffs*10|2|0.2|ENSG00000070018|chr12:12159831-12159831|G/-|frameshift_variant', 'PPP6R3-LRP5|3|fusion', 'PPP6R3-LRP5|1|fusion', 'PPP6R3-LRP5|4|fusion', 'PPP6R3-LRP5|2|fusion'] 133000 11060 VYVKDLSSF True NCI_RA007_Epitope_Rep5 1056.54916177872 1056.5480699358602 49.177 2 0.23203919659012207 0.00036105427849320016 0.9438714419765777 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 28454 15728 FSEPDFVAKFY True H1975_Epitope_Rep2 1348.63395403184 1348.6328499358601 65.67 2 0.23201499731562983 0.00036105427849320016 0.9438714419765777 ['ENSG00000179933|ENST00000319074|C14orf119'] 40464 8290 HSDQQVFEY True H1975_Epitope_Rep2 1151.4883524273098 1151.48724993586 36.838 2 0.23201049470985977 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'SNTB2-CIRH1A|1|fusion'] 87835 10691 QVISQAAVVHA True PC9_epitope_Rep1 1121.61930702721 1121.61820993586 46.014 2 0.23200867196485875 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 61426 7253 LLESGTLGTK True NCI_RA007_Epitope_Rep2 1017.5706254992899 1017.56952993586 32.832 2 0.2319901461060374 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1', 'ENST00000490869.1_1_X:47063082-47065999:+|nuORF'] 132879 19386 VYTSKSDVWSF True PC9_epitope_Rep1 1317.62411762413 1317.6230299358601 79.378 2 0.2319747069850064 0.00036105427849320016 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 14651 9241 DVNAAIATIK True NCI_RA007_Epitope_Rep4 1014.57095985246 1014.56986993586 42.399 2 0.2319719475108228 0.00036105427849320016 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 8099 5524 ATELTHEDY True H1975_Epitope_Rep2 1077.46146897313 1077.4603699358602 26.256 2 0.23196411034619982 0.00036105427849320016 0.9438714419765777 ['ENSG00000165916|ENST00000298852|PSMC3'] 89644 8825 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 38.912 3 0.2319566822566162 0.00036105427849320016 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 12554 14073 DLDGIIAEVK True H1975_Epitope_Rep1 1071.58119018299 1071.58008993586 59.299 2 0.23195609896939592 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 24286 17816 FAAPEKDIFL True PC9_epitope_Rep6 1149.60701100801 1149.6059099358602 81.16 2 0.23193800874388834 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183826|Q96Q07-3|BTBD9', 'nc|ENSG00000183826|Q96Q07-2|BTBD9', 'ENSG00000183826|ENST00000481247|BTBD9'] 135214 9764 YAYDGKDYL True NCI_RA007_Epitope_Rep2 1106.4920408254197 1106.49094993586 42.6 2 0.23192582071257492 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 37559 20202 GYPLWKVTF True PC9_epitope_Rep4 1109.59096702105 1109.5898699358602 85.844 2 0.23191809038570366 0.00036105427849320016 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 31154 11104 GDEELDSLIK True H1975_Epitope_Rep1 1117.5502839775297 1117.54918993586 47.676 2 0.2318998584103857 0.00036105427849320016 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 124265 17197 VLDDKLYVV True PC9_epitope_Rep4 1062.5961119711399 1062.5950099358602 74.154 2 0.23189585208815838 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 86754 20475 QRLINLVGESL True PC9_epitope_Rep3 1240.7139356880398 1240.71282993586 84.015 2 0.23188858415015876 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 67613 4951 LTEVNKAGTQY True H1975_Epitope_Rep2 1222.61936659686 1222.61826993586 24.127 2 0.23188849701589462 0.00036105427849320016 0.9438714419765777 ['ENSG00000170542|ENST00000380698|SERPINB9'] 7151 13426 AQYLINVRL True NCI_RA007_Epitope_Rep5 1088.63422881536 1088.63312993586 58.329 2 0.23188815247286218 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 93456 4987 RSDTPLIYK True NCI_RA007_Epitope_Rep3 1091.5975089534697 1091.59640993586 26.614 2 0.2318848169366124 0.00036105427849320016 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 87176 20118 QSLEYLEQV True PC9_epitope_Rep1 1107.54480467427 1107.54427496793 82.215 1 0.23188157778619817 0.00036105427849320016 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 85494 18730 QLIDKVWQL True PC9_epitope_Rep6 1141.64954452633 1141.64844993586 84.686 2 0.23188014016293762 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 101746 16343 SPHGLVMVGV True PC9_epitope_Rep5 994.5269868654999 994.52588993586 67.86 2 0.23186691396787296 0.00036105427849320016 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 117064 20336 TYQRWQFTL True PC9_epitope_Rep5 1241.61930702721 1241.61820993586 83.258 2 0.23184970363610852 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 45740 21878 ISMPDFDLHL True PC9_epitope_Rep5 1186.5692456003 1186.5681499358602 89.191 2 0.23184880094781973 0.00036105427849320016 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 140729 15591 YYQHIVTTL True PC9_epitope_Rep3 1136.5866099166 1136.58550993586 65.118 2 0.23183785786651 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 13243 14398 DLVFPSEIVGK True H1975_Epitope_Rep1 1202.65468947642 1202.65358993586 60.578 2 0.23182636845940924 0.00036105427849320016 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 53995 11948 KYLDNPNAL True PC9_epitope_Rep5 1046.53965972418 1046.53856993586 50.955 2 0.23180945836230718 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 60645 8435 LITLEEEM[Oxidation]TK True NCI_RA007_Epitope_Rep1 1221.61625574281 1221.61514993586 36.809 2 0.23179944585452888 0.00036105427849320016 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 52841 9776 KQVSELSQL True PC9_epitope_Rep4 1030.56587447202 1030.56476993586 45.244 2 0.23179807815482711 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 94987 9239 RYQDIIHSI True NCI_RA007_Epitope_Rep3 1143.6036569630699 1143.60254993586 43.441 2 0.23179623629293933 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 96854 4085 SESPKEPEQLR True NCI_RA007_Epitope_Rep2 1298.64664397386 1298.6455499358601 20.528 2 0.23178501830256742 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 114342 6681 TSDDVKEQIY True H1975_Epitope_Rep3 1196.55609763396 1196.5550099358602 30.653 2 0.23177696691834546 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 89361 8417 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 37.331 2 0.23177327520420943 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 84937 20483 QHVQEWWEL True PC9_epitope_Rep2 1253.5829215184897 1253.58182993586 84.218 2 0.23177265828157548 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion'] 64976 6839 LSDDHGASWRY True H1975_Epitope_Rep3 1305.5738133867699 1305.57270993586 31.262 2 0.23177137845658563 0.00036105427849320016 0.9438714419765777 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 22271 3756 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 19.527 2 0.23175430489864726 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 6620 18588 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 76.523 2 0.23175268201722285 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 132251 20562 VYKVPPFTF True PC9_epitope_Rep1 1096.59571804832 1096.5946299358602 83.904 2 0.23174541968012566 0.00036105427849320016 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 105451 7584 SVAQVVLSR True NCI_RA007_Epitope_Rep3 957.5607295219299 957.55962993586 36.963 2 0.2317412361056028 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3', 'ENST00000493581.1_1_9:33443725-33447528:-|nuORF', 'ENST00000463983.5_1_9:33443205-33447528:-|nuORF'] 15383 7869 EALQDVEDENQ True H1975_Epitope_Rep1 1288.5419041218 1288.5408099358601 35.218 2 0.23173985300051322 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000435487.1_1_7:56635601-56635700:-|nuORF'] 55430 5709 LATNTSAPDLK True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 26.988 2 0.23172940137653247 0.00036105427849320016 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 35181 10322 GSDFYSMHY True H1975_Epitope_Rep1 1105.41749598617 1105.41638993586 44.651 2 0.2317276691482092 0.00036105427849320016 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 138817 7998 YSDKYFDEHY True H1975_Epitope_Rep1 1365.55134660669 1365.54970490379 35.71 3 0.2317189296908025 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 54043 12426 KYLSVQGQLF True NCI_RA007_Epitope_Rep5 1181.64445914589 1181.6433699358602 54.453 2 0.2317138893494522 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 119934 5709 VEYETYKEA True H1975_Epitope_Rep3 1130.5131701928199 1130.5120699358602 26.988 2 0.23170954686939088 0.00036105427849320016 0.9438714419765777 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 118293 5945 VDATAETDLAK True H1975_Epitope_Rep3 1132.5611830144 1132.56008993586 27.878 2 0.2316987913258862 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 115600 5513 TVIHFNNPK True NCI_RA007_Epitope_Rep4 1068.5716285587998 1068.5705299358601 27.799 2 0.23168828728513866 0.00036105427849320016 0.9438714419765777 ['RGNEF-BTF3|1|fusion', 'nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4', 'ENST00000418879.1_1_6:137865036-137865375:-|nuORF'] 107100 13909 SYMGHFDLL True NCI_RA007_Epitope_Rep3 1081.49026700361 1081.4891699358602 62.026 2 0.2316816762583963 0.00036105427849320016 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 132367 19979 VYM[Oxidation]DWYEKF True PC9_epitope_Rep3 1295.55326156343 1295.55216993586 82.094 2 0.2316503400103243 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 54308 21538 KYPSPFFVF True PC9_epitope_Rep2 1130.5800679841798 1130.5789699358602 88.313 2 0.2316469793159382 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 85337 12427 QLDAELLRY True H1975_Epitope_Rep2 1119.59242357303 1119.5913299358601 52.886 2 0.23164695366791885 0.00036105427849320016 0.9438714419765777 ['ENSG00000105849|ENST00000222567|POLR1F', 'POLR1F|p.S83F|1|0.34|ENSG00000105849|chr7:19708769-19708769|G/A|missense_variant'] 105815 4012 SVINKVTEK True NCI_RA007_Epitope_Rep4 1016.5866099166 1016.58550993586 21.688 2 0.23162931150966562 0.00036105427849320016 0.9438714419765777 ['ENSG00000124784|ENST00000379834|RIOK1'] 138854 5530 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 26.279 2 0.231626676053675 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 129407 5760 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 27.153 2 0.23162623178333708 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 95068 21773 RYSIAFPLL True PC9_epitope_Rep3 1078.61751612206 1078.61640993586 89.047 2 0.23161875858110154 0.00036105427849320016 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 42236 3484 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 18.297 2 0.2316171311296445 0.00036105427849320016 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 60303 5990 LIEVDDER True NCI_RA007_Epitope_Rep3 987.4872897981498 987.48618993586 30.541 2 0.23161684898085166 0.00036105427849320016 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6'] 14271 4404 DSYVGDEAQSK True PC9_epitope_Rep4 1197.51496109797 1197.5138699358602 23.386 2 0.2316134444752538 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 46311 4966 ITESEEVVSR True NCI_RA007_Epitope_Rep5 1147.57208205127 1147.57098993586 25.804 2 0.2316039256485962 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 56668 7858 LEAAIAEAEER True NCI_RA007_Epitope_Rep2 1200.59863115228 1200.5975299358602 35.196 2 0.2315994913244002 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF'] 110683 20557 TIYKDFVYI True PC9_epitope_Rep1 1160.6117620352798 1160.6106699358602 83.885 2 0.23159082296641564 0.00036105427849320016 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 43300 11469 IHEPEPHIL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 48.996 2 0.23158320983926506 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 138783 12998 YSDDNPYYNYY True H1975_Epitope_Rep2 1475.55174052951 1475.55064993586 55.114 2 0.23157927922598248 0.00036105427849320016 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 24103 18271 EYSDVLAKL True PC9_epitope_Rep4 1036.54407639828 1036.5429699358601 78.35 2 0.23157852832141082 0.00036105427849320016 0.9438714419765777 ['ENSG00000126705|ENST00000673934|AHDC1'] 139282 5257 YTDHQNSSSYY True H1975_Epitope_Rep3 1363.5316737912701 1363.53056993586 25.305 2 0.23157644966266208 0.00036105427849320016 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 89300 5431 RELQSQIQEA True NCI_RA007_Epitope_Rep5 1200.60986454232 1200.6087699358602 27.578 2 0.23157438866575625 0.00036105427849320016 0.9438714419765777 ['ENSG00000179085|ENST00000368400|DPM3', 'nc|ENSG00000179085|Q9P2X0-2|DPM3'] 53060 18579 KSADEVLFTGV True PC9_epitope_Rep5 1164.6026539035602 1164.60154993586 76.488 2 0.23155447131507334 0.00036105427849320016 0.9438714419765777 ['ENSG00000089006|ENST00000377759|SNX5', 'ENST00000490175.5_1_20:17923003-17949420:-|nuORF'] 132073 6482 VYIKHPVSL True NCI_RA007_Epitope_Rep3 1054.61751612206 1054.61640993586 32.529 2 0.2315532258663131 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 85390 5391 QLEEAEEEAQR True PC9_epitope_Rep4 1330.60008770426 1330.5989899358601 27.465 2 0.23155155255404516 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 116545 16287 TYFDKNYNL True PC9_epitope_Rep1 1176.5451390274397 1176.5440499358601 67.466 2 0.2315513076116638 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 5439 7879 ALYDATYETK True NCI_RA007_Epitope_Rep2 1173.5553693579702 1173.55426993586 35.279 2 0.2315374080244092 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 61223 9500 LLDPSQKNLY True H1975_Epitope_Rep3 1189.63428838501 1189.6331899358602 41.547 2 0.2315207061659305 0.00036105427849320016 0.9438714419765777 ['ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000277462|ENST00000366503|ZNF670'] 89353 7554 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 34.049 2 0.2315085313563111 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 116725 22860 TYLDIFRDF True PC9_epitope_Rep1 1188.5815245361598 1188.5804299358601 92.725 2 0.23149879661944722 0.00036105427849320016 0.9438714419765777 ['ENSG00000072818|ENST00000158762|ACAP1'] 102020 5311 SPPGQVTEAVK True NCI_RA007_Epitope_Rep2 1111.5873381925899 1111.58624993586 25.281 2 0.23148217517736847 0.00036105427849320016 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 45574 13897 ISGLIYEETR True PC9_epitope_Rep5 1179.6135529404298 1179.61244993586 58.475 2 0.23146455497869511 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 28079 9418 FRDQNPEQL True PC9_epitope_Rep5 1145.5465360097699 1145.54542993586 41.181 2 0.23145711120708376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 89725 10083 REYQELMSV True H1975_Epitope_Rep2 1153.54375912845 1153.5426699358602 43.777 2 0.23145703883392338 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 77642 18351 NYYGKYIAL True PC9_epitope_Rep1 1103.56514619603 1103.56404993586 75.376 2 0.23144887754548885 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 89741 5271 REYQLNDSAA True NCI_RA007_Epitope_Rep3 1165.53636524889 1165.53526993586 27.738 2 0.2314414951837541 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 87806 8165 QVIGVVLQK True NCI_RA007_Epitope_Rep3 982.6175161220598 982.61640993586 39.236 2 0.23143335915279573 0.00036105427849320016 0.9438714419765777 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 84692 16176 QHFDSVMQL True PC9_epitope_Rep4 1103.5069796969099 1103.50588993586 70.165 2 0.23143284885523646 0.00036105427849320016 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 91623 10902 RPFEDQTSL True PC9_epitope_Rep2 1091.52473793603 1091.52364993586 47.254 2 0.2314284511125382 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 35182 10567 GSDFYSMHY True H1975_Epitope_Rep2 1105.41749598617 1105.41638993586 45.668 2 0.23140974133758083 0.00036105427849320016 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 70974 6895 MEQELAHAV True H1975_Epitope_Rep3 1026.4804305958999 1026.47932993586 31.481 2 0.23138717844102 0.00036105427849320016 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 24214 12911 EYVEKFYRI True PC9_epitope_Rep6 1245.6393737654498 1245.63772490379 61.196 3 0.23138560282168086 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 81367 5722 PPSPPPPPP True NCI_RA007_Epitope_Rep3 881.4647038787699 881.46360993586 29.484 2 0.23136932999116575 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant', 'ENST00000230859.7_2_5:6713434-6713641:+|nuORF', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000100312|ENST00000216139|ACR', 'ENST00000395348.7_1_10:61444064-61469743:-|nuORF'] 138855 4076 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 20.804 2 0.23136474224021025 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 136874 20091 YIYDKDMEII True PC9_epitope_Rep5 1301.6213407428097 1301.62024993586 82.33 2 0.23136225545737454 0.00036105427849320016 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 117636 11949 VAIEHLDKI True PC9_epitope_Rep5 1036.59169529704 1036.5905899358602 50.959 2 0.2313565207432598 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 105770 6787 SVIDTSTIVRK True NCI_RA007_Epitope_Rep5 1217.69795127073 1217.69629490379 32.793 3 0.2313510573793783 0.00036105427849320016 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 90684 7575 RKLLQQIRL True NCI_RA007_Epitope_Rep1 1166.7611606639798 1166.75950490379 33.458 3 0.2313305575650308 0.00036105427849320016 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 85762 19876 QLVRDLLEV True PC9_epitope_Rep2 1083.62880908175 1083.6277099358601 81.847 2 0.23131915828328545 0.00036105427849320016 0.9438714419765777 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 73842 4451 NHEEEISTLR True H1975_Epitope_Rep3 1226.58912909774 1226.58748490379 22.243 3 0.23128908668542947 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 138003 7539 YQAVTATLEEK True H1975_Epitope_Rep3 1251.63468230783 1251.63358993586 33.981 2 0.23128190237526178 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 135394 7052 YDNEFGYSNR True H1975_Epitope_Rep1 1263.5156298043098 1263.51452993586 32.158 2 0.23127480282530438 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'chr12:6537216-6538101|251|78.77|0.54|7.19|+|1|GAPDH,GAPDH|1'] 14593 13117 DVIEEYFK True H1975_Epitope_Rep1 1041.50187723313 1041.5007899358602 55.546 2 0.2312653721697735 0.00036105427849320016 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12'] 102892 11147 SQIDPSSIERA True PC9_epitope_Rep2 1201.5938801250102 1201.59278993586 48.204 2 0.23126447896834554 0.00036105427849320016 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 43610 18729 IIIPEIQKV True PC9_epitope_Rep2 1051.66413196131 1051.66302993586 77.42 2 0.23126258035768546 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 28996 20606 FTIFRTISV True PC9_epitope_Rep2 1082.6124307416198 1082.61132993586 84.695 2 0.23125934608056511 0.00036105427849320016 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 3479 14179 [Acetylation]-AGLNSLEAVKR True PC9_epitope_Rep2 1198.66698581192 1198.6658899358602 59.807 2 0.23124584950362095 0.00036105427849320016 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 73678 11445 NGNPITIFQER True H1975_Epitope_Rep3 1287.6571490879098 1287.6560499358602 49.143 2 0.23123320496505712 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH'] 93659 9738 RTFTWLVGK True NCI_RA007_Epitope_Rep3 1106.6236641316598 1106.6225699358602 45.372 2 0.23122836878391986 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 75457 19127 NQIEDNDDFQL True PC9_epitope_Rep4 1349.57353860325 1349.57244993586 81.665 2 0.2312270785656104 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 71387 9391 MIEPRTLQY True H1975_Epitope_Rep1 1149.58523001761 1149.5841299358601 41.034 2 0.23121798947307912 0.00036105427849320016 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 53801 12676 KYFLWEEKF True NCI_RA007_Epitope_Rep3 1288.6492101731599 1288.64810993586 57.105 2 0.23121730951843514 0.00036105427849320016 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 112364 13127 TNAENEFVTIK True PC9_epitope_Rep3 1264.6299312805597 1264.62882993586 55.516 2 0.23121264648627413 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 103756 15765 SRFLANEVL True PC9_epitope_Rep4 1047.57129420563 1047.57018993586 68.562 2 0.23120927161245836 0.00036105427849320016 0.9438714419765777 ['IPO7-WEE1|1|fusion', 'nc|ENSG00000166483|P30291-2|WEE1', 'ENSG00000166483|ENST00000450114|WEE1'] 21688 17547 ERYFISHVL True PC9_epitope_Rep3 1162.61349337078 1162.6118549037901 72.681 3 0.2312003252855753 0.00036105427849320016 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 35394 12748 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56476993586 54.095 2 0.23117889356004695 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 7890 3862 ATAQAVAPPR True NCI_RA007_Epitope_Rep4 980.5403284305198 980.53922993586 21.06 2 0.2311616262969344 0.00036105427849320016 0.9438714419765777 ['ENST00000609438.1_1_4:90171359-90228902:-|nuORF'] 107536 10866 TADHNLLLY True H1975_Epitope_Rep3 1058.53965972418 1058.53856993586 46.878 2 0.23115349614229677 0.00036105427849320016 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 132628 10901 VYPTKTFPNL True NCI_RA007_Epitope_Rep5 1178.6335601090198 1178.6324699358602 48.57 2 0.23115092592600886 0.00036105427849320016 0.9438714419765777 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 73520 12905 NFGIGQDIQPK True PC9_epitope_Rep4 1215.62478633047 1215.62368993586 57.519 2 0.23114241739694472 0.00036105427849320016 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 67091 7407 LTDADAMKY True H1975_Epitope_Rep3 1026.46919720586 1026.46808993586 33.468 2 0.23113473383733815 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A'] 38643 15816 HHLVIPSVL True PC9_epitope_Rep4 1013.6022004110899 1013.60110993586 68.761 2 0.2311171524428959 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 1603 13534 AEFQSIPRVF True NCI_RA007_Epitope_Rep4 1192.6240580544797 1192.62296993586 59.266 2 0.2311133074883719 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 14932 8451 DYMKTTSNF True NCI_RA007_Epitope_Rep4 1105.47501086229 1105.47390993586 39.323 2 0.23110233337051447 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 54338 9099 KYQEVTNNL True PC9_epitope_Rep1 1107.5560380643099 1107.5549499358601 39.85 2 0.23109649082965678 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 20922 9449 EQVANSAFVER True PC9_epitope_Rep3 1248.6098645423197 1248.6087699358602 41.287 2 0.23108966603987854 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 139328 5107 YTDSEPRATY True H1975_Epitope_Rep2 1201.52513185885 1201.5240299358602 24.724 2 0.23108656873051187 0.00036105427849320016 0.9438714419765777 ['ENSG00000158480|ENST00000289431|SPATA2'] 35227 9561 GSHSMRYFFT True H1975_Epitope_Rep2 1231.5444278347898 1231.5433299358601 41.75 2 0.23107946760208142 0.00036105427849320016 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 43739 8037 IITEGFEAAK True H1975_Epitope_Rep3 1077.57062549929 1077.5695299358601 35.888 2 0.23107211114957935 0.00036105427849320016 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 125624 11935 VM[Oxidation]ENFVAFVDK True H1975_Epitope_Rep1 1313.6325745132897 1313.6314699358602 50.911 2 0.2310686979249073 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 18273 7091 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1176.6060254122801 1176.6049299358601 31.576 2 0.2310604722418152 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 136771 10894 YIQENLELVEK True NCI_RA007_Epitope_Rep2 1376.71874628496 1376.7176499358602 46.982 2 0.2310565236876488 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 73203 6739 NEFGEIQGDK True H1975_Epitope_Rep3 1135.51456717515 1135.51346993586 30.876 2 0.23105483630006285 0.00036105427849320016 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF'] 31222 11154 GDLGIEIPAEK True NCI_RA007_Epitope_Rep2 1140.60265390356 1140.60154993586 47.969 2 0.23105340400799837 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 94711 8302 RYLEQLHQL True NCI_RA007_Epitope_Rep5 1198.64585612822 1198.64474993586 38.611 2 0.2310442475504258 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 47696 19750 IYPVDLGDKF True PC9_epitope_Rep2 1165.6019256275697 1165.60082993586 81.357 2 0.23102984007681562 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-3|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H'] 15868 8649 EDLYLKPIQR True NCI_RA007_Epitope_Rep2 1273.70303665117 1273.70140490379 38.288 3 0.2310165238951153 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 87473 13829 QTETGTPYMLY True H1975_Epitope_Rep2 1302.5802042068199 1302.57910993586 58.34 2 0.23101596289052606 0.00036105427849320016 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 73059 8659 NDLAVVDVR True NCI_RA007_Epitope_Rep4 999.53490869691 999.53380993586 40.089 2 0.23099216235939024 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 53457 4315 KVIDPVTGK True NCI_RA007_Epitope_Rep4 955.57023157647 955.56912993586 22.941 2 0.2309856064448204 0.00036105427849320016 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 137201 8374 YLDYHMEKY True H1975_Epitope_Rep3 1260.5485101557201 1260.54740993586 37.195 2 0.23097409532285945 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 67298 11587 LTDPIQGTEY True H1975_Epitope_Rep1 1135.53971929383 1135.5386299358602 49.556 2 0.23097019453872208 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 139806 7591 YVDDPYQKY True H1975_Epitope_Rep3 1189.5291546101298 1189.52804993586 34.181 2 0.23095531902344638 0.00036105427849320016 0.9438714419765777 ['ENSG00000132313|ENST00000337109|MRPL35'] 21352 7814 ERLKEAYSV True PC9_epitope_Rep5 1093.57677350889 1093.57566993586 35.001 2 0.2309486927714239 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 27669 16622 FQDENHLYL True PC9_epitope_Rep1 1177.54038800017 1177.53928993586 68.764 2 0.23093954290548346 0.00036105427849320016 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 115403 11833 TVEVDLFTSK True NCI_RA007_Epitope_Rep1 1137.59175486669 1137.59064993586 50.008 2 0.23093476456306677 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF'] 96627 5486 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 26.116 2 0.23092950875702736 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 113235 8159 TQDTQPHYI True PC9_epitope_Rep3 1101.50908787189 1101.50798993586 36.361 2 0.2309291067433962 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 84694 17773 QHFDSVMQL True PC9_epitope_Rep5 1103.5069796969099 1103.50588993586 73.383 2 0.23090748329499042 0.00036105427849320016 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 74056 10058 NHSNQFTQL True PC9_epitope_Rep3 1087.50467119779 1087.50356993586 43.644 2 0.23089118371490006 0.00036105427849320016 0.9438714419765777 ['ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENSG00000132024|ENST00000318003|CC2D1A'] 22380 6593 ETERLTDDY True H1975_Epitope_Rep3 1140.4934973773998 1140.49240993586 30.313 2 0.23088985250486463 0.00036105427849320016 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000505306.5_1_17:48154319-48165696:+|nuORF'] 94400 12246 RYFDPANGKF True PC9_epitope_Rep2 1213.5880068989297 1213.58635490379 52.416 3 0.23088903867221316 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 89576 6226 RESEGFEEHVP True H1975_Epitope_Rep3 1314.5840437173 1314.5824049037901 28.961 3 0.23088578706124668 0.00036105427849320016 0.9438714419765777 ['ENSG00000119801|ENST00000261353|YPEL5'] 112484 5131 TNRPPLSLSR True NCI_RA007_Epitope_Rep5 1139.64110510095 1139.63944490379 26.431 3 0.23088569265816153 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 87061 11396 QSDYYASYY True H1975_Epitope_Rep2 1158.4505699362599 1158.4494699358602 48.884 2 0.23087800664348831 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 90490 4570 RKAALEQDL True NCI_RA007_Epitope_Rep5 1042.5771078620598 1042.5760099358602 24.238 2 0.23084959992869805 0.00036105427849320016 0.9438714419765777 ['ENSG00000100292|ENST00000216117|HMOX1'] 72271 14265 MSDPYMPSYY True H1975_Epitope_Rep3 1252.4780476374 1252.4769499358601 60.212 2 0.2308444156810675 0.00036105427849320016 0.9438714419765777 ['YTHDF3|p.G256Afs*15|1|0.27|ENSG00000185728|chr8:63186776-63186776|G/-|frameshift_variant', 'ENSG00000185728|ENST00000539294|YTHDF3'] 47822 15614 IYSIDFTRF True NCI_RA007_Epitope_Rep5 1160.5866099165999 1160.58550993586 66.767 2 0.23082880319412719 0.00036105427849320016 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B'] 94124 19109 RWFDKSFTF True PC9_epitope_Rep4 1232.59784330664 1232.5961849037901 81.594 3 0.23082311653573992 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 140842 17828 YYTDIMHTL True PC9_epitope_Rep6 1155.5270464351497 1155.5259499358601 81.207 2 0.23081167407820305 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 117637 9744 VAIEHLDKI True PC9_epitope_Rep6 1036.59169529704 1036.5905899358602 47.902 2 0.23077630440499597 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 104790 8598 STDPREALQY True H1975_Epitope_Rep3 1178.5567663402999 1178.5556699358601 38.064 2 0.2307705015448342 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 52084 17269 KLLPGDLTQV True PC9_epitope_Rep4 1082.6335601090202 1082.6324699358602 74.43 2 0.23076196447546354 0.00036105427849320016 0.9438714419765777 ['ENSG00000147459|ENST00000276440|DOCK5'] 68834 13292 LVDTFLEDVK True NCI_RA007_Epitope_Rep2 1177.6230549949698 1177.6219499358601 56.339 2 0.23075295884920696 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 4795 11179 ALELDSNLYR True NCI_RA007_Epitope_Rep2 1192.60880191316 1192.6077099358602 48.064 2 0.2307458448376434 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 43323 9411 IHEPEPHIL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 46.417 2 0.23074564001055017 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 116519 18210 TYDYNFHSF True PC9_epitope_Rep5 1192.48253877088 1192.4814499358602 75.056 2 0.23074467488168385 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 45569 13446 ISGLIYEETR True PC9_epitope_Rep2 1179.6135529404298 1179.61244993586 57.0 2 0.23073695700783764 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 115383 6139 TVEPQLEAR True NCI_RA007_Epitope_Rep2 1041.5454733806098 1041.54436993586 28.487 2 0.2307231638014865 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 111039 15710 TLDPQTGLFY True H1975_Epitope_Rep2 1153.5655401188499 1153.56444993586 65.596 2 0.2307143827730686 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 91286 20181 RLYDGLFKVI True PC9_epitope_Rep2 1222.70739375562 1222.70628993586 83.041 2 0.2307035922559583 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 42678 19115 IEVIEIMTDR True PC9_epitope_Rep4 1217.63257413285 1217.6314699358602 81.618 2 0.23070249437088958 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 94750 19611 RYLNEFEEL True PC9_epitope_Rep5 1211.5822528121498 1211.5811499358601 80.486 2 0.23069530808279115 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 52668 19991 KQFEPNDFYL True PC9_epitope_Rep5 1299.6135529404298 1299.61244993586 81.95 2 0.23067277713087542 0.00036105427849320016 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 67553 8942 LTEQRALLY True H1975_Epitope_Rep1 1105.6131590176099 1105.61206993586 39.299 2 0.2306719277504135 0.00036105427849320016 0.9438714419765777 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2'] 102042 5908 SPPPPPPPP True NCI_RA007_Epitope_Rep5 881.4647038787699 881.46360993586 29.411 2 0.2306646105201479 0.00036105427849320016 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 135224 13790 YAYDGKDYL True PC9_epitope_Rep2 1106.4920408254197 1106.49094993586 58.328 2 0.23066079871849338 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 53961 13406 KYITQGQLLQF True NCI_RA007_Epitope_Rep5 1337.73433677945 1337.7332299358602 58.252 2 0.23065212431421248 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 101999 8102 SPNSYFM[Oxidation]DVK True H1975_Epitope_Rep3 1202.52777509158 1202.5266699358601 36.139 2 0.23064703734352204 0.00036105427849320016 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 41052 20152 HYINMPVQF True PC9_epitope_Rep1 1147.5484505860697 1147.5473499358602 82.345 2 0.23063472223701828 0.00036105427849320016 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF', 'ENST00000513183.1_1_18:13124610-13124766:+|nuORF', 'ENST00000510237.5_1_18:13103579-13124766:+|nuORF'] 134814 17375 WYQTKFETL True PC9_epitope_Rep4 1214.5971746002997 1214.5960699358602 74.836 2 0.23063271679234115 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 6734 18605 AQDFRVLYV True PC9_epitope_Rep4 1109.58694426977 1109.58584993586 79.64 2 0.23062013441089754 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF'] 41008 13821 HYGKVYLL True PC9_epitope_Rep5 991.5491022090698 991.54800993586 58.181 2 0.23061455976103226 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 131941 20030 VYFPDQHINF True PC9_epitope_Rep1 1278.6033226099 1278.6022299358601 81.873 2 0.23060305878338389 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 106144 17012 SVPDPELIKTV True PC9_epitope_Rep2 1196.66525416012 1196.66414993586 70.688 2 0.2306006424605097 0.00036105427849320016 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 18298 12792 EITALAPSTMK True PC9_epitope_Rep3 1160.61111041228 1160.61000993586 54.226 2 0.2305910516081758 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 41071 12382 HYKPTPLYF True PC9_epitope_Rep6 1164.59678067748 1164.59568993586 59.036 2 0.23056010739833308 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 24213 12906 EYVEKFYRI True PC9_epitope_Rep6 1245.6393737654498 1245.63826993586 61.175 2 0.23055600525756592 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 4271 22254 AIIPYIPTL True PC9_epitope_Rep4 999.60046907559 999.59936993586 93.839 2 0.23054530685835953 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 46173 5786 ITDEQRQYY True H1975_Epitope_Rep2 1214.5567663403 1214.5556699358601 27.25 2 0.230542367949591 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135597|Q96D71-2|REPS1', 'nc|ENSG00000135597|Q96D71-4|REPS1', 'nc|ENSG00000135597|Q96D71-3|REPS1', 'ENSG00000135597|ENST00000450536|REPS1'] 92271 8862 RQLDTETNL True PC9_epitope_Rep5 1088.5462016566 1088.5451099358602 39.031 2 0.23053900441972447 0.00036105427849320016 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant'] 71713 2753 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 14.618 2 0.23052814789314463 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 71554 5958 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep2 1143.50189469691 1143.5007899358602 27.899 2 0.2305232127542091 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 107528 4765 TADGIVSHLKK True NCI_RA007_Epitope_Rep4 1167.66117183919 1167.65953490379 24.761 3 0.2305199632246943 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 87624 20529 QTVAWFPLYY True H1975_Epitope_Rep1 1286.6335601090198 1286.6324699358602 85.377 2 0.23051278423336904 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 113290 15199 TQIDHYVGI True PC9_epitope_Rep1 1044.52400966004 1044.52290993586 63.283 2 0.2305064692296008 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 77272 16949 NYIRITSEI True PC9_epitope_Rep5 1107.59242357303 1107.5913299358601 70.212 2 0.2305023011532136 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 61199 10496 LLDPAQRTLY True H1975_Epitope_Rep3 1188.65027280232 1188.64916993586 45.436 2 0.23050029045916623 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130544|Q8N988|ZNF557', 'ENSG00000130544|ENST00000252840|ZNF557', 'ENSG00000167785|ENST00000601372|ZNF558', 'ENST00000597304.5_1_19:8921959-8932201:-|nuORF'] 71564 7812 M[Oxidation]LDSHEELY True H1975_Epitope_Rep2 1151.48049054599 1151.4793899358601 34.996 2 0.2304722716586237 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 115809 9707 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep2 1134.59546072858 1134.5943699358602 42.676 2 0.23044925766854255 0.00036105427849320016 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 53882 13403 KYIDQKFVL True PC9_epitope_Rep4 1152.6542955536 1152.65263490379 59.455 3 0.23044382165119914 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 108428 6893 TEEFLDQNKA True H1975_Epitope_Rep3 1193.5564319871298 1193.55532993586 31.473 2 0.23043327919271717 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000488973.6_1_19:3574329-3578516:+|nuORF', 'nc|ENSG00000064961|Q9P0W2-2|HMG20B'] 53447 10150 KVIDPATATSV True PC9_epitope_Rep2 1100.607739284 1100.60664993586 44.379 2 0.23043244988113962 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 8029 10210 ATDRWYDEY True H1975_Epitope_Rep2 1217.49891711101 1217.4978299358602 44.277 2 0.23042796089778372 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 42677 20054 IEVIEIMTDR True PC9_epitope_Rep3 1217.63257413285 1217.6314699358602 82.387 2 0.23041726899835532 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 12591 12682 DLDSRVLYY True H1975_Epitope_Rep1 1142.5607890915799 1142.5596899358602 53.837 2 0.23041407782822346 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 89732 10047 REYQELMSV True NCI_RA007_Epitope_Rep5 1153.54375912845 1153.5426699358602 45.285 2 0.2304122527013809 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 53727 15318 KYEELFPAF True NCI_RA007_Epitope_Rep5 1142.5648118428596 1142.56370993586 65.62 2 0.230410208654072 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 118670 9750 VEAQVYILSK True H1975_Epitope_Rep3 1148.6441247927198 1148.64302993586 42.527 2 0.23039339616743834 0.00036105427849320016 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM', 'ENST00000569217.1_1_16:28854298-28855510:-|nuORF'] 86103 11822 QPQPQPYAV True PC9_epitope_Rep1 1026.5134449763398 1026.5123499358601 50.34 2 0.23039228236709067 0.00036105427849320016 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 44943 6096 IQETQAELPR True H1975_Epitope_Rep1 1183.6197009500297 1183.6186099358601 28.517 2 0.23038787584023881 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 12799 13362 DLINNLGTIAK True NCI_RA007_Epitope_Rep2 1170.66083748602 1170.6597499358602 56.615 2 0.23037960192440102 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 38619 18990 HHIYLEGTLL True PC9_epitope_Rep1 1194.6397081186199 1194.63805490379 77.831 3 0.23037674953068304 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 17280 19529 EHDDFFISL True PC9_epitope_Rep6 1121.50293986229 1121.50184993586 87.781 2 0.23037258410211198 0.00036105427849320016 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.E233D|1|0.61|ENSG00000125676|chrX:123686617-123686617|T/G|missense_variant'] 4273 21071 AIIPYIPTL True PC9_epitope_Rep6 999.60046907559 999.59936993586 93.874 2 0.23036661241307319 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 137209 9522 YLEETSIRY True H1975_Epitope_Rep1 1172.57135377528 1172.5702499358601 41.549 2 0.23035643468301356 0.00036105427849320016 0.9438714419765777 ['ENSG00000158796|ENST00000368006|DEDD', 'nc|ENSG00000158796|O75618-2|DEDD'] 116743 8701 TYLEKAIKI True NCI_RA007_Epitope_Rep3 1077.6433965167298 1077.6422899358602 41.308 2 0.2303428063642001 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 73558 6499 NFSDNQLQEGK True NCI_RA007_Epitope_Rep1 1278.5840437173 1278.5829499358601 29.298 2 0.23034183167329939 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 94426 13542 RYFENPQVI True PC9_epitope_Rep6 1164.5927579262 1164.5916699358602 63.822 2 0.2303374635702127 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 87808 8831 QVIGVVLQK True NCI_RA007_Epitope_Rep4 982.6175161220598 982.61640993586 40.778 2 0.23032709000865062 0.00036105427849320016 0.9438714419765777 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 18271 6841 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1176.6060254122801 1176.6049299358601 31.271 2 0.23032564469838632 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 138909 9650 YSEDHIIGAY True H1975_Epitope_Rep3 1166.5244035828598 1166.5233099358602 42.135 2 0.230317985963578 0.00036105427849320016 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 52083 17979 KLLPGDLTQV True PC9_epitope_Rep2 1082.6335601090202 1082.6324699358602 74.46 2 0.23031564638481103 0.00036105427849320016 0.9438714419765777 ['ENSG00000147459|ENST00000276440|DOCK5'] 14339 4357 DTDSEEEIR True NCI_RA007_Epitope_Rep2 1092.45711186868 1092.45600993586 21.584 2 0.23031498173966536 0.00036105427849320016 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 38128 10870 HEQFIPIAA True H1975_Epitope_Rep3 1024.5341804209197 1024.53308993586 46.894 2 0.2303138403772302 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 93702 16896 RTLNETELTEL True PC9_epitope_Rep5 1317.6776097489699 1317.6765099358602 70.002 2 0.2303034872071082 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF'] 42376 10055 IENGHIFTV True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 43.668 2 0.23029386266217122 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'SPAG16-CUL3|1|fusion'] 76555 10954 NTDPWAGYRY True H1975_Epitope_Rep3 1241.5465360097699 1241.54542993586 47.223 2 0.23028721069253838 0.00036105427849320016 0.9438714419765777 ['ENSG00000164024|ENST00000296411|METAP1', 'ENST00000513199.5_1_4:99943548-99960531:+|nuORF', 'ENST00000510209.5_1_4:99916904-99957225:+|nuORF'] 138030 8647 YQDPDATSLKY True H1975_Epitope_Rep2 1299.59829679911 1299.5971899358601 38.219 2 0.23026373810781106 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'nc|ENSG00000131778|Q86WJ1-5|CHD1L', 'nc|ENSG00000131778|Q86WJ1-3|CHD1L', 'nc|ENSG00000131778|Q86WJ1-2|CHD1L'] 77369 19003 NYLPQISHL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 78.316 2 0.23026014379473467 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ADCK1|p.N489Gfs*12|1|0.28|ENSG00000063761|chr14:77933283-77933289|CAACTTA/-|frameshift_variant', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 132074 6566 VYIKHPVSL True NCI_RA007_Epitope_Rep3 1054.61751612206 1054.61640993586 32.879 2 0.2302568402267801 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 70086 17913 LYIGWDKHYGF True PC9_epitope_Rep6 1397.67682190333 1397.6751749037899 81.527 3 0.23024449098174918 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 47235 19455 IYDSVKVYF True PC9_epitope_Rep2 1132.5804619069997 1132.57936993586 80.215 2 0.2302359010149553 0.00036105427849320016 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 77428 10543 NYNDRYDEI True PC9_epitope_Rep2 1200.5047307674402 1200.50362993586 45.874 2 0.23022165261384997 0.00036105427849320016 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000492798.1_1_9:136217794-136218218:+|nuORF', 'ENST00000463740.5_1_9:136217403-136218218:+|nuORF', 'ENST00000429766.1_1_7:96830042-96830234:-|nuORF', 'ENST00000541658.2_1_14:35704472-35704841:-|nuORF', 'ENST00000482859.1_1_4:113709241-113709472:-|nuORF'] 2400 8698 AEQKSNYFEV True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 38.418 2 0.23021248391438529 0.00036105427849320016 0.9438714419765777 ['ENSG00000163840|ENST00000296161|DTX3L', 'DTX3L|p.R260Ifs*6|1|0.13|ENSG00000163840|chr3:122568867-122568868|AG/-|frameshift_variant'] 94618 20972 RYLDEINLL True PC9_epitope_Rep1 1147.62372370131 1147.62262993586 85.494 2 0.23019613357506227 0.00036105427849320016 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 24128 5446 EYSKQMQRF True PC9_epitope_Rep4 1215.57064258263 1215.56954993586 27.685 2 0.23019504376479608 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 85369 10997 QLDVAGRVMQY True H1975_Epitope_Rep3 1278.6390564956198 1278.6379499358602 47.389 2 0.2301886794567044 0.00036105427849320016 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 60658 11065 LITPAVVSER True PC9_epitope_Rep6 1083.62880908175 1083.6277099358601 53.48 2 0.23017692843799656 0.00036105427849320016 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 22152 12729 ESYSVYVYK True PC9_epitope_Rep2 1136.5389910178399 1136.5378899358602 54.267 2 0.23017477294393146 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 110872 20603 TLADVLYHV True PC9_epitope_Rep3 1029.54949613189 1029.54838993586 84.518 2 0.23017393767186847 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ENST00000520079.1_1_8:37996261-37996586:+|nuORF'] 40540 15170 HSQFLGYPITL True NCI_RA007_Epitope_Rep2 1274.6659228664598 1274.66482993586 63.7 2 0.23016165050444223 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 35811 9326 GTYDILVTK True NCI_RA007_Epitope_Rep3 1008.54916177872 1008.54806993586 43.781 2 0.23015145763746772 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114302|P13861-2|PRKAR2A', 'ENSG00000114302|ENST00000265563|PRKAR2A'] 97069 10832 SEYLRYEDTL True H1975_Epitope_Rep1 1287.59829679911 1287.5971899358601 46.627 2 0.23014278282440082 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 9852 18808 AYLPKILQI True PC9_epitope_Rep6 1057.65356727761 1057.6524699358602 84.987 2 0.230133791375585 0.00036105427849320016 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 103595 11608 SRDKTIIM[Oxidation]W True PC9_epitope_Rep4 1164.59612943492 1164.59502993586 52.41 2 0.23012425066230344 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 70616 7282 MADKNIQYY True H1975_Epitope_Rep2 1144.52229540788 1144.52118993586 32.948 2 0.230122779205805 0.00036105427849320016 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30', 'ENST00000604751.1_1_9:115618996-115637523:+|nuORF'] 114852 9666 TTDGKLPEV True PC9_epitope_Rep5 958.4971262058599 958.49602993586 42.147 2 0.23011886013287933 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 54421 13763 KYSPFVVSF True NCI_RA007_Epitope_Rep3 1072.5593325396 1072.55822993586 61.464 2 0.2301173991408011 0.00036105427849320016 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 61218 9358 LLDPSQKNLY True H1975_Epitope_Rep1 1189.63428838501 1189.6331899358602 40.903 2 0.23011199337861601 0.00036105427849320016 0.9438714419765777 ['ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000277462|ENST00000366503|ZNF670'] 138662 20998 YRSEGWWTL True PC9_epitope_Rep1 1196.5614577979197 1196.56036993586 85.596 2 0.23010717443171033 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 102452 10224 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep1 1225.56488887629 1225.56378993586 44.269 2 0.23010292320653317 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 21845 10239 ESEDPDYYQY True H1975_Epitope_Rep1 1307.48299226335 1307.4818899358602 44.327 2 0.2300997808477973 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 25179 11076 FDVSGYPTLK True H1975_Epitope_Rep1 1125.57062549929 1125.5695299358601 47.567 2 0.23009620361833502 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 41586 8131 IDEPLEGSEDR True PC9_epitope_Rep4 1258.56772494682 1258.5666299358602 38.731 2 0.23009016310821465 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 17847 12434 EIAQDFKTDLR True PC9_epitope_Rep3 1334.68302948258 1334.6819299358601 52.853 2 0.23008619805323716 0.00036105427849320016 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 135368 10064 YDGIILPGK True H1975_Epitope_Rep3 974.54368247546 974.54258993586 43.749 2 0.23008402383128082 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 27122 12092 FLQQNPVTEY True H1975_Epitope_Rep2 1237.59790287629 1237.5968099358602 51.594 2 0.23008090428388134 0.00036105427849320016 0.9438714419765777 ['ENSG00000055130|ENST00000325222|CUL1'] 36410 21628 GVIDLIFEKA True PC9_epitope_Rep2 1103.62266107215 1103.6215699358602 88.667 2 0.2300426763428457 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 40874 8975 HVLVTLGEK True PC9_epitope_Rep3 994.58113061334 994.58002993586 39.469 2 0.23003659517648034 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 24004 13535 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep4 1300.57578791316 1300.57468993586 59.959 2 0.23003630800129957 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 35047 6028 GRDENSVEL True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 31.532 2 0.23003134040682435 0.00036105427849320016 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 21303 14941 ERISLQQEL True PC9_epitope_Rep1 1114.59823722946 1114.5971499358602 62.293 2 0.2300311127083733 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 24349 11815 FADQEVRSL True PC9_epitope_Rep2 1063.52982331647 1063.5287299358602 50.777 2 0.2300259206810618 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 71730 3720 M[Oxidation]M[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1273.50672275761 1273.50562993586 19.371 2 0.2300036924018769 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 65399 9437 LSERYAELY True H1975_Epitope_Rep1 1142.5607890915799 1142.5596899358602 41.214 2 0.22999917321077476 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 67278 14145 LTDPAIVKV True PC9_epitope_Rep1 954.57498260374 954.57388993586 59.231 2 0.22999106521996288 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 76133 10112 NRPVEVYQY True PC9_epitope_Rep2 1166.57202248162 1166.57092993586 44.232 2 0.2299905125387023 0.00036105427849320016 0.9438714419765777 ['ENST00000484499.5_1_X:48791963-48792283:-|nuORF', 'nc|ENSG00000068308|Q96G74-4|OTUD5', 'nc|ENSG00000068308|Q96G74-2|OTUD5', 'nc|ENSG00000068308|Q96G74-3|OTUD5', 'ENSG00000068308|ENST00000376488|OTUD5', 'nc|ENSG00000068308|Q96G74|OTUD5'] 117176 20730 TYTDRVFFL True PC9_epitope_Rep2 1160.5866099165999 1160.58550993586 85.175 2 0.22998728920186942 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 28768 9538 FTDAGFEHY True H1975_Epitope_Rep2 1085.4454249861699 1085.4443299358602 41.66 2 0.22998661991498887 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A'] 31591 7915 GEFTIETEGK True NCI_RA007_Epitope_Rep2 1109.52406922969 1109.5229699358601 35.421 2 0.22998045757807636 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1'] 109654 5553 THDQAVQAL True PC9_epitope_Rep4 981.4879585044899 981.48686993586 28.126 2 0.22996847814026888 0.00036105427849320016 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 93455 6055 RSDTPLIYK True NCI_RA007_Epitope_Rep2 1091.5975089534697 1091.59640993586 28.157 2 0.2299609996290422 0.00036105427849320016 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 46837 6742 IVEPPENIQEK True H1975_Epitope_Rep1 1294.6768814729796 1294.6757899358602 30.974 2 0.22995423527395498 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 26776 9904 FLDQNLQKY True H1975_Epitope_Rep2 1167.59242357303 1167.5913299358601 43.084 2 0.22995387024354919 0.00036105427849320016 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 44344 19089 IMLEALERV True PC9_epitope_Rep4 1072.59506642532 1072.59396993586 81.517 2 0.2299393499201644 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 138906 9677 YSEDHIIGAY True H1975_Epitope_Rep1 1166.5244035828598 1166.5233099358602 42.147 2 0.22992514250748927 0.00036105427849320016 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 22274 4011 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 20.553 2 0.2299057525447031 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 24036 10714 EYQDLLNVK True NCI_RA007_Epitope_Rep2 1120.5764391557198 1120.5758749679298 46.273 1 0.22990265266311805 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 135531 7620 YEEDSYSHIM[Oxidation]A True H1975_Epitope_Rep3 1359.52889729039 1359.52778993586 34.291 2 0.2298964325886851 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 107292 14784 SYQRAFNEF True PC9_epitope_Rep1 1160.5250722892 1160.5239699358601 61.686 2 0.22988483937767315 0.00036105427849320016 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 114883 10901 TTDWRCYGY True H1975_Epitope_Rep2 1163.47059418819 1163.46948993586 46.961 2 0.22987642493424149 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 86840 13938 QRQDIAFAY True PC9_epitope_Rep2 1110.5458077337798 1110.54470993586 58.892 2 0.22986109947901584 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 23815 21944 EYLIVFPKL True PC9_epitope_Rep1 1120.6532329244399 1120.65212993586 89.225 2 0.22985232890016746 0.00036105427849320016 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 107746 17587 TALVELLK True PC9_epitope_Rep2 885.5535188831699 885.55242993586 72.926 2 0.22984913534266552 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 70991 6196 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep3 1282.5975859869 1282.59648993586 28.845 2 0.22984106838160384 0.00036105427849320016 0.9438714419765777 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 113758 6137 TRDPQFQKL True PC9_epitope_Rep2 1131.6036569630699 1131.6020249037902 29.0 3 0.22982855864355117 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 102904 17073 SQIEADFRL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 73.668 2 0.22981954997318085 0.00036105427849320016 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 73780 19417 NHDFTPLEI True PC9_epitope_Rep1 1084.5189242796 1084.5178299358602 79.498 2 0.22981476670510126 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 107040 22828 SYLPFTEAF True PC9_epitope_Rep5 1073.5069626135698 1073.5058699358601 92.803 2 0.22980622912278292 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 21804 16443 ESDLPDELLY True H1975_Epitope_Rep3 1192.54994962436 1192.54884993586 68.731 2 0.2297962471909145 0.00036105427849320016 0.9438714419765777 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 116832 11095 TYM[Oxidation]GHTGAVW True PC9_epitope_Rep5 1137.49133001321 1137.49022993586 47.666 2 0.22979119514937701 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 48575 10164 KEIDAYIVQA True H1975_Epitope_Rep2 1148.607739284 1148.60664993586 44.097 2 0.2297902963495747 0.00036105427849320016 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF'] 6943 21862 AQLQDFDWQV True PC9_epitope_Rep5 1248.57750178488 1248.57640993586 89.128 2 0.22978584800823873 0.00036105427849320016 0.9438714419765777 ['ENSG00000169019|ENST00000381571|COMMD8'] 117200 19664 TYTDVTPRQFF True PC9_epitope_Rep5 1373.6615657620098 1373.6604699358602 80.695 2 0.22978569218277103 0.00036105427849320016 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 107102 14465 SYMGHFDLL True NCI_RA007_Epitope_Rep4 1081.49026700361 1081.4891699358602 62.993 2 0.2297415104059115 0.00036105427849320016 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 125476 7483 VLVDQTTGLSR True H1975_Epitope_Rep1 1187.65100107831 1187.64990993586 33.781 2 0.22973799263358258 0.00036105427849320016 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 102854 18517 SQHEEFLEL True PC9_epitope_Rep1 1130.5244035828598 1130.5233099358602 76.015 2 0.22970204029619656 0.00036105427849320016 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 96454 11270 SEIPKLPAV True NCI_RA007_Epitope_Rep4 952.5593325395998 952.55822993586 50.243 2 0.22970154415830565 0.00036105427849320016 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 94982 14908 RYQDAIRVF True PC9_epitope_Rep5 1166.6196413803798 1166.61799490379 62.348 3 0.22969476216086512 0.00036105427849320016 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 107024 13253 SYLNSVQRL True PC9_epitope_Rep4 1078.5771078620598 1078.5760099358602 58.876 2 0.22969366021654694 0.00036105427849320016 0.9438714419765777 ['ENSG00000136243|ENST00000258742|NUP42', 'nc|ENSG00000136243|O15504-2|NUP42'] 70082 20158 LYIGWDKHYGF True PC9_epitope_Rep3 1397.67682190333 1397.6751749037899 82.792 3 0.22968433782715236 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 29771 16506 FVSISDLLVPK True H1975_Epitope_Rep3 1216.7067250492798 1216.70562993586 68.988 2 0.2296780177037382 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 24129 5528 EYSKQMQRF True PC9_epitope_Rep4 1215.57064258263 1215.56954993586 28.028 2 0.2296765325851208 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 2328 11527 AEQDLIREL True H1975_Epitope_Rep1 1085.57168812845 1085.5705899358602 49.325 2 0.22967424912035758 0.00036105427849320016 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 94743 12077 RYLNEFEEL True NCI_RA007_Epitope_Rep3 1211.5822528121498 1211.5811499358601 54.625 2 0.22966853945317756 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 133234 7107 WEEEAGRYAA True H1975_Epitope_Rep2 1180.5149015283198 1180.51380993586 32.267 2 0.22966769849979882 0.00036105427849320016 0.9438714419765777 ['ENST00000529712.5_1_11:47736424-47736610:-|nuORF'] 14265 4901 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 24.217 2 0.22966443338685052 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 129295 5012 VTDRSDARLQY True H1975_Epitope_Rep3 1322.6578773638998 1322.6567899358602 24.404 2 0.22966030581383742 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 27339 8143 FMEKETPLRY True H1975_Epitope_Rep3 1312.6485585501598 1312.64692490379 36.299 3 0.22965874212765014 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1'] 14273 4570 DSYVGDEAQSK True PC9_epitope_Rep4 1197.51496109797 1197.5138699358602 24.075 2 0.22965384186487756 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 73773 17143 NHDFQALAL True PC9_epitope_Rep2 1027.50869394907 1027.50758993586 71.19 2 0.22962810674972445 0.00036105427849320016 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 14352 8533 DTDYRSMEY True H1975_Epitope_Rep2 1178.4550036936998 1178.45390993586 37.777 2 0.22961394696831278 0.00036105427849320016 0.9438714419765777 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 129293 4987 VTDRSDARLQY True H1975_Epitope_Rep3 1322.6578773638998 1322.6562449037901 24.311 3 0.22957081967628498 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 117034 7817 TYQEVAQKF True NCI_RA007_Epitope_Rep3 1112.5502244078798 1112.54912993586 37.866 2 0.22956196026339643 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 136560 12516 YHSEVPVSL True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 59.573 2 0.22954729889607547 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 101809 10895 SPIENIQRVA True PC9_epitope_Rep6 1125.6142216467701 1125.6131299358601 52.77 2 0.22954689494967262 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 132337 9790 VYLPTHTSL True NCI_RA007_Epitope_Rep4 1029.54949613189 1029.54838993586 44.505 2 0.22954556000510842 0.00036105427849320016 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 48904 7430 KEVEQFTQVA True H1975_Epitope_Rep2 1177.5979028762902 1177.5968099358602 33.524 2 0.22953518747120322 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 22333 4748 ETEKDFSRY True H1975_Epitope_Rep2 1173.5302172392899 1173.52858490379 23.353 3 0.2295091319871675 0.00036105427849320016 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 105321 5556 STVGAGAYAYK True NCI_RA007_Epitope_Rep3 1086.53457434374 1086.53346993586 28.848 2 0.22950566624962704 0.00036105427849320016 0.9438714419765777 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 42789 21034 IFIDPGYQTF True PC9_epitope_Rep4 1199.58627556343 1199.5851699358602 89.07 2 0.22949969057605188 0.00036105427849320016 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 112052 15271 TLTEEGVIKV True PC9_epitope_Rep3 1087.6124903112698 1087.6113899358602 63.89 2 0.22949440494743836 0.00036105427849320016 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 138905 9500 YSEDHIIGAY True H1975_Epitope_Rep1 1166.5244035828598 1166.5233099358602 41.462 2 0.22948445450549534 0.00036105427849320016 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 94699 8249 RYLENGKETL True PC9_epitope_Rep5 1221.6353510141698 1221.6337049037902 36.671 3 0.22948311398568552 0.00036105427849320016 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 89844 18966 RFLDDLGLKF True PC9_epitope_Rep6 1222.6710082468996 1222.66936490379 85.598 3 0.22948206410016458 0.00036105427849320016 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 136656 7245 YIDQEELNK True PC9_epitope_Rep2 1150.5506183307 1150.5495299358602 33.256 2 0.22947892541207304 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 94499 14636 RYIANTVEL True PC9_epitope_Rep1 1077.58185888933 1077.5807699358602 61.121 2 0.2294711103425807 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 107408 18838 SYTRLFSNF True PC9_epitope_Rep4 1133.5505587610498 1133.54946993586 80.547 2 0.2294591248305612 0.00036105427849320016 0.9438714419765777 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 28014 19556 FQYESKVFYL True PC9_epitope_Rep4 1322.6546894764197 1322.65358993586 83.344 2 0.22945787292437247 0.00036105427849320016 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 69843 13857 LYADVGGKQF True PC9_epitope_Rep5 1096.55530978832 1096.5542099358602 58.321 2 0.22944894646596153 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 113056 8818 TPVPSDIDISR True H1975_Epitope_Rep1 1198.61936659686 1198.61826993586 38.841 2 0.22944844927480032 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000413059.1_1_X:57420873-57421110:-|nuORF'] 28883 13165 FTDVNSILRY True H1975_Epitope_Rep1 1226.62953735774 1226.62844993586 55.734 2 0.22942813977602444 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 4771 9247 ALEEQLQQIR True NCI_RA007_Epitope_Rep5 1226.6619001151798 1226.66080993586 42.219 2 0.22942685036081192 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 67297 11454 LTDPIQGTEY True H1975_Epitope_Rep1 1135.53971929383 1135.5386299358602 49.038 2 0.22942188544368702 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 29218 16649 FVDDYTVRV True PC9_epitope_Rep1 1112.55022440788 1112.54912993586 68.87 2 0.22941012134756283 0.00036105427849320016 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 91362 5128 RMQKEITAL True NCI_RA007_Epitope_Rep3 1088.60121443492 1088.60010993586 27.165 2 0.22940581598013668 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 47974 9353 KAFQKIVVL True NCI_RA007_Epitope_Rep4 1044.6695516949198 1044.66844993586 42.832 2 0.22939212852797647 0.00036105427849320016 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 90142 7219 RGYLLKQAL True NCI_RA007_Epitope_Rep3 1060.6393141958 1060.63820993586 35.507 2 0.22939019142289474 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000127483|Q5SSJ5-3|HP1BP3', 'nc|ENSG00000127483|Q5SSJ5-2|HP1BP3', 'ENSG00000127483|ENST00000438032|HP1BP3'] 110192 15986 TIDQLYLEY True H1975_Epitope_Rep2 1156.5652057656798 1156.5641099358602 66.688 2 0.22938971126479518 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 16564 8142 EEQLQQIRAE True PC9_epitope_Rep4 1242.6204292260197 1242.6193299358602 38.773 2 0.22938019350145022 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 69214 11745 LVNELTEFAK True NCI_RA007_Epitope_Rep2 1162.6233893481399 1162.6222899358602 50.282 2 0.22937868760666835 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 53955 18785 KYITDWQNVF True PC9_epitope_Rep6 1312.6451874218799 1312.6440899358602 84.898 2 0.22937645551131294 0.00036105427849320016 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 73518 13556 NFGIGQDIQPK True PC9_epitope_Rep2 1215.62478633047 1215.62368993586 57.435 2 0.22935473000786658 0.00036105427849320016 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 89714 11924 REYQDLLNV True NCI_RA007_Epitope_Rep2 1148.5825871653199 1148.5814899358602 50.986 2 0.22935312771930763 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 131945 19953 VYFPDQHINF True PC9_epitope_Rep5 1278.6033226099 1278.6022299358601 81.802 2 0.22934150022417857 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 73547 21639 NFLSRSFYW True PC9_epitope_Rep1 1218.5821932425 1218.58108993586 88.062 2 0.22933858678179816 0.00036105427849320016 0.9438714419765777 ['ENSG00000104442|ENST00000276569|ARMC1', 'nc|ENSG00000104442|Q9NVT9-2|ARMC1'] 48430 12871 KEEDVLKFLAA True H1975_Epitope_Rep3 1261.69180326113 1261.69070993586 54.732 2 0.229334861065032 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 107340 5310 SYRQSSATSSF True NCI_RA007_Epitope_Rep4 1219.5469299325898 1219.5458299358602 26.983 2 0.2293337116747144 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 110031 20471 THVFVIAEL True PC9_epitope_Rep5 1027.5702315764697 1027.56912993586 83.778 2 0.22933110669397658 0.00036105427849320016 0.9438714419765777 ['ENSG00000272047|ENST00000607778|GTF2H5'] 102635 14116 SQDARFYAL True PC9_epitope_Rep4 1069.51925863277 1069.5181699358602 62.203 2 0.2293303226112463 0.00036105427849320016 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 107295 15000 SYQRAFNEF True PC9_epitope_Rep3 1160.5250722892 1160.5239699358601 62.824 2 0.22932107243975425 0.00036105427849320016 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 37602 8798 GYSFTTTAER True PC9_epitope_Rep4 1131.51965255559 1131.5185499358602 41.36 2 0.22930591152948102 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 48734 11263 KEPEYVPWTA True H1975_Epitope_Rep2 1218.5920892198596 1218.59098993586 48.367 2 0.2293046588194551 0.00036105427849320016 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 35397 12986 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56476993586 55.031 2 0.22930093237652474 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 77291 19369 NYIVPDKQIF True PC9_epitope_Rep1 1235.6550238295897 1235.65392993586 79.311 2 0.2292929865175039 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 49353 9936 KIFSGVFVK True NCI_RA007_Epitope_Rep2 1023.6117024656298 1023.61060993586 43.276 2 0.22928930277464724 0.00036105427849320016 0.9438714419765777 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 17689 17600 EHSLPTLGL True PC9_epitope_Rep2 965.51819600361 965.51708993586 72.976 2 0.22928815443801984 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 47800 10751 IYQYIQSRF True NCI_RA007_Epitope_Rep3 1216.6240580544797 1216.62296993586 49.335 2 0.22928782188039498 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105204|Q9Y463-2|DYRK1B', 'nc|ENSG00000105204|Q9Y463-3|DYRK1B', 'ENSG00000105204|ENST00000323039|DYRK1B', 'nc|ENSG00000157540|Q13627-4|DYRK1A', 'nc|ENSG00000157540|Q13627-3|DYRK1A', 'nc|ENSG00000157540|Q13627-5|DYRK1A', 'ENSG00000157540|ENST00000647188|DYRK1A', 'nc|ENSG00000157540|Q13627|DYRK1A'] 118659 8972 VEAQLQELQVK True H1975_Epitope_Rep1 1283.7085159544297 1283.7074099358601 39.416 2 0.22928630921745446 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 43309 11703 IHEPEPHIL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 50.035 2 0.2292780819964026 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 48455 6518 KEEFQQYAA True H1975_Epitope_Rep3 1112.5138388991602 1112.51274993586 30.042 2 0.22926441278205362 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 118660 9157 VEAQLQELQVK True H1975_Epitope_Rep1 1283.7085159544297 1283.7074099358601 40.128 2 0.22926229858882974 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 89720 11695 REYQDLLNV True NCI_RA007_Epitope_Rep5 1148.5825871653199 1148.5814899358602 51.639 2 0.22925132148471467 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 2840 17034 [Acetylation]-AEVQVLVLDGR True NCI_RA007_Epitope_Rep1 1239.68230152289 1239.6812099358601 70.387 2 0.22924803987504397 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000479992.5_1_19:49990877-49993604:+|nuORF', 'ENST00000472481.5_1_19:49990877-49994169:+|nuORF'] 47934 14344 IYYTGKYQSL True PC9_epitope_Rep1 1234.6233893481399 1234.6222899358602 59.998 2 0.22923522024557955 0.00036105427849320016 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 5367 8533 ALTPDETYVPK True H1975_Epitope_Rep3 1232.6288686514001 1232.6277699358602 37.809 2 0.22923460039985868 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 93620 10365 RTDDYLDQPCY True H1975_Epitope_Rep2 1387.5714304282699 1387.5703299358602 44.878 2 0.22923003506726772 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 38757 10151 HHYEGAVVI True PC9_epitope_Rep5 1023.5137793295098 1023.5126899358601 44.032 2 0.22921838495646726 0.00036105427849320016 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 61694 15959 LLIDDKGTIKL True PC9_epitope_Rep6 1227.74383883399 1227.74218490379 73.684 3 0.22920611133177812 0.00036105427849320016 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 1810 5576 AEIDEEPVSKA True H1975_Epitope_Rep2 1186.5717476981001 1186.57064993586 26.452 2 0.22920601504905858 0.00036105427849320016 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000550343.1_1_12:57108115-57108487:-|nuORF', 'ENST00000419462.1_1_8:102381113-102381542:+|nuORF'] 132011 15627 VYGPMKNYL True PC9_epitope_Rep2 1083.5423025764699 1083.54120993586 65.386 2 0.2292043941975261 0.00036105427849320016 0.9438714419765777 ['ENSG00000166825|ENST00000300060|ANPEP'] 43642 17727 IILEEGKEILV True PC9_epitope_Rep6 1254.7435044808199 1254.74240993586 80.82 2 0.2292029529534374 0.00036105427849320016 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 93875 8394 RVFVVGVGMTK True NCI_RA007_Epitope_Rep5 1191.67979910879 1191.67816490379 38.963 3 0.22918835868960483 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 53386 3689 KVAPAPAVVK True NCI_RA007_Epitope_Rep4 978.6226015024998 978.62150993586 20.302 2 0.2291880399059788 0.00036105427849320016 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF'] 132077 6784 VYIKHPVSL True NCI_RA007_Epitope_Rep5 1054.61751612206 1054.61640993586 32.781 2 0.22918601948589487 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 106900 23549 SYIPLFPQL True PC9_epitope_Rep1 1076.5906326678798 1076.5895299358601 95.372 2 0.22918517762391888 0.00036105427849320016 0.9438714419765777 ['ENSG00000165996|ENST00000361271|HACD1'] 48906 7424 KEVEQFTQVA True H1975_Epitope_Rep3 1177.5979028762902 1177.5968099358602 33.534 2 0.22918237684571557 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 83019 10969 PYKVTQDEL True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 47.081 2 0.22917287845511208 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 11687 22426 DHEDFLSAIQL True PC9_epitope_Rep1 1286.61428121642 1286.6131899358602 91.081 2 0.22916846148062592 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000284753|P0DPD7|EEF1AKMT4'] 43038 8427 IGGIGTVPVGR True NCI_RA007_Epitope_Rep5 1024.6029286870798 1024.60182993586 39.093 2 0.2291506713030791 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 117124 11981 TYSPALNKMF True NCI_RA007_Epitope_Rep4 1170.5743309807401 1170.5732299358601 53.089 2 0.2291457012785139 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 95908 9530 SDVEAIFSK True H1975_Epitope_Rep1 994.49712620586 994.49602993586 41.58 2 0.22910973940490367 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 9783 14583 AYLESFYKF True NCI_RA007_Epitope_Rep4 1166.5648118428599 1166.56370993586 63.474 2 0.2290875013660023 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 65461 10288 LSFETTEESLR True NCI_RA007_Epitope_Rep3 1310.63541058382 1310.63430993586 47.539 2 0.22908453491936284 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 7900 6896 ATATANQIILK True NCI_RA007_Epitope_Rep3 1142.66592286646 1142.66482993586 34.23 2 0.22907384050383062 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 51995 7328 KLEAEIATYR True NCI_RA007_Epitope_Rep2 1192.6451874218799 1192.6435349037902 33.127 3 0.22906665827600559 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 32499 10674 GGNFGFGDSR True PC9_epitope_Rep3 1012.4362572847999 1012.43516993586 46.003 2 0.229062009717501 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 90912 20543 RLEEAFEFV True PC9_epitope_Rep3 1138.56587447202 1138.56476993586 84.283 2 0.22906174718248626 0.00036105427849320016 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4', 'nc|ENSG00000120875|Q13115-2|DUSP4'] 56300 15268 LDQTLLDLNEM-[Oxidation] True NCI_RA007_Epitope_Rep1 1319.6278830556698 1319.6273749679299 63.463 1 0.2290607864023564 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 140397 18715 YYEYNHDLF True PC9_epitope_Rep5 1262.5244035828598 1262.5233099358602 77.006 2 0.2290473576389616 0.00036105427849320016 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 94115 13751 RWFDKSFTF True NCI_RA007_Epitope_Rep4 1232.59784330664 1232.59674993586 60.12 2 0.2290415898563145 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 109669 6446 THEDAVAAM True PC9_epitope_Rep5 943.40693130247 943.40582993586 29.768 2 0.2290386234797905 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'nc|ENSG00000096746|P31942-6|HNRNPH3', 'ENST00000478698.1_1_10:70098871-70101119:+|nuORF', 'nc|ENSG00000096746|P31942-5|HNRNPH3', 'ENST00000490442.5_1_10:70098233-70101119:+|nuORF', 'nc|ENSG00000096746|P31942-4|HNRNPH3', 'ENST00000469172.5_1_10:70098233-70101808:+|nuORF', 'ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF', 'nc|ENSG00000132463|Q12849-5|GRSF1', 'ENSG00000132463|ENST00000254799|GRSF1'] 60644 7924 LITLEEEM[Oxidation]TK True H1975_Epitope_Rep3 1221.61625574281 1221.61514993586 35.449 2 0.22902953414797406 0.00036105427849320016 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 110725 10460 TKEVNSGFFY True H1975_Epitope_Rep1 1190.5607890915799 1190.5596899358602 45.189 2 0.2290268864914856 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 136413 13362 YHFEEVQKL True PC9_epitope_Rep3 1191.5924235730297 1191.5907749037901 56.43 3 0.22902555260563262 0.00036105427849320016 0.9438714419765777 ['ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant'] 22986 15421 EVIKELAQI True PC9_epitope_Rep6 1041.6070110080097 1041.6059099358602 71.473 2 0.2290247919378306 0.00036105427849320016 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 41124 18580 HYNSDLNNLLF True PC9_epitope_Rep6 1348.6411646706 1348.64006993586 84.109 2 0.22902050431703685 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 18748 14915 ELDPLTGEWHY True H1975_Epitope_Rep1 1358.61428121642 1358.6131899358602 62.608 2 0.22901847464189945 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 76321 5876 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep3 1278.5074335698198 1278.50632993586 27.613 2 0.22901026171550398 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 44905 8215 IQDNHDGTYTV True PC9_epitope_Rep5 1261.55749461629 1261.5563899358601 36.538 2 0.22899929038458294 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 47539 23362 IYLPYLQNW True PC9_epitope_Rep5 1208.6229954253201 1208.62188993586 94.846 2 0.22899041059301237 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 18821 8786 ELEDSTLRY True H1975_Epitope_Rep2 1124.5349682665599 1124.5338699358601 38.759 2 0.22898611174265526 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 108267 10668 TEAPVPVSV True H1975_Epitope_Rep2 897.4807478657299 897.4801949679301 46.06 1 0.22898472837083678 0.00036105427849320016 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 24828 11085 FDAGELITQR True H1975_Epitope_Rep3 1148.5825871653199 1148.5814899358602 47.731 2 0.22898439423636724 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 42018 4914 IEDSPTKRLP True H1975_Epitope_Rep3 1154.62953735774 1154.62789490379 24.029 3 0.2289746686998966 0.00036105427849320016 0.9438714419765777 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000325117.8_1_X:101802327-101802774:-|nuORF'] 91361 5041 RMQKEITAL True NCI_RA007_Epitope_Rep3 1088.60121443492 1088.60010993586 26.824 2 0.2289741727713932 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 113267 13539 TQFELTGHSV True PC9_epitope_Rep5 1117.54038800017 1117.53928993586 57.1 2 0.22897164206123075 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 14223 7258 DSYDSYATHNE True PC9_epitope_Rep4 1300.48438924568 1300.48328993586 35.227 2 0.22896878360737014 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'ENST00000591055.5_1_19:1271297-1272439:+|nuORF', 'ENST00000593128.5_1_19:1271297-1272439:+|nuORF'] 103904 14263 SRMDGEGQLTL True PC9_epitope_Rep1 1205.5710365054497 1205.56992993586 59.686 2 0.22896698579835548 0.00036105427849320016 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 24323 7279 FADLSEAANR True H1975_Epitope_Rep3 1092.5199869087598 1092.5188899358602 32.973 2 0.22896034330745146 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 93645 18979 RTFDEFQEL True PC9_epitope_Rep1 1183.5509526838698 1183.54984993586 77.788 2 0.22892449140061055 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 26710 7725 FLDESRSTQY True H1975_Epitope_Rep3 1244.567331024 1244.56622993586 34.697 2 0.22892374662949827 0.00036105427849320016 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 23868 20194 EYMEHVYLI True PC9_epitope_Rep1 1195.5583465634297 1195.55724993586 82.505 2 0.22892321391555742 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 88376 13022 QYNPKFQTL True PC9_epitope_Rep1 1137.58185888933 1137.5807699358602 54.959 2 0.22890820355700486 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 2258 5747 AEPAKIEAFR True NCI_RA007_Epitope_Rep5 1130.6084079903399 1130.6067749037902 28.794 3 0.22889238020849195 0.00036105427849320016 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 51939 5498 KKVAAIEAL True NCI_RA007_Epitope_Rep5 941.5909670210499 941.58986993586 27.836 2 0.22889214677176592 0.00036105427849320016 0.9438714419765777 ['ENSG00000100380|ENST00000216218|ST13', 'nc|ENSG00000232150|Q8IZP2|ST13P4'] 43030 8524 IGGIGTVPVGR True H1975_Epitope_Rep3 1024.6029286870798 1024.60182993586 37.773 2 0.22887511357875323 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 121714 8420 VGLQVVAVK True H1975_Epitope_Rep1 911.5804023373498 911.57930993586 37.315 2 0.22886972716656212 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 47882 9521 IYTSSVNRL True PC9_epitope_Rep2 1051.56620882519 1051.5651099358602 41.971 2 0.22886626231668372 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 132010 16687 VYGPMKNYL True PC9_epitope_Rep1 1083.5423025764699 1083.54120993586 69.014 2 0.22885303135958168 0.00036105427849320016 0.9438714419765777 ['ENSG00000166825|ENST00000300060|ANPEP'] 61690 18446 LLIDDKGTIKL True PC9_epitope_Rep3 1227.74383883399 1227.74218490379 76.157 3 0.2288508433041656 0.00036105427849320016 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 40479 6248 HSEAFEALQQK True NCI_RA007_Epitope_Rep1 1286.6255146064598 1286.62387490379 28.337 3 0.22884411240137573 0.00036105427849320016 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 92288 15631 RQLESMIRL True PC9_epitope_Rep1 1144.6386625727998 1144.63702490379 64.944 3 0.22884107702229609 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 16216 8140 EEFQFIKKA True NCI_RA007_Epitope_Rep4 1138.60225998074 1138.60116993586 38.101 2 0.2288276964470591 0.00036105427849320016 0.9438714419765777 ['ENSG00000140259|ENST00000267812|MFAP1'] 434 10653 AALQELLSK True NCI_RA007_Epitope_Rep5 971.5651461960299 971.56404993586 47.613 2 0.2288197714720745 0.00036105427849320016 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 129263 13653 VTDPTGFLRM True H1975_Epitope_Rep1 1135.5695799534699 1135.56848993586 57.649 2 0.22881743571767474 0.00036105427849320016 0.9438714419765777 ['ENSG00000100154|ENST00000397906|TTC28'] 109993 19954 THSQFIVVSL True PC9_epitope_Rep5 1129.6131590176099 1129.61206993586 81.805 2 0.22881290758094414 0.00036105427849320016 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 11587 7120 DGVVEITGK True NCI_RA007_Epitope_Rep2 916.48656152216 916.48601496793 32.316 1 0.22878873657801102 0.00036105427849320016 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 111957 6510 TLSDYNIQK True H1975_Epitope_Rep3 1080.54513902744 1080.5440499358601 30.01 2 0.22877021089613384 0.00036105427849320016 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000392399.3_1_2:137087013-137087097:-|nuORF', 'ENST00000597285.1_1_19:7730614-7730836:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 89044 5827 REEFLERAA True H1975_Epitope_Rep3 1119.5672714543498 1119.5661699358602 27.434 2 0.22876405118869042 0.00036105427849320016 0.9438714419765777 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1'] 7763 11188 ASVFGTMPLK True NCI_RA007_Epitope_Rep5 1049.5579526406098 1049.55684993586 49.67 2 0.2287598588205757 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 96364 9105 SEGFAVIKEA True H1975_Epitope_Rep3 1049.53932537101 1049.53822993586 40.01 2 0.22873909568794806 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 28446 13915 FSELDENLEY True H1975_Epitope_Rep2 1257.5401132166498 1257.5390099358601 58.672 2 0.22873161708461265 0.00036105427849320016 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 42965 8499 IGAEVYHNLK True PC9_epitope_Rep5 1142.60840799034 1142.6067749037902 37.633 3 0.22872441456908932 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 26531 19179 FIVEEIQRI True PC9_epitope_Rep4 1145.6444591458899 1145.6433699358602 81.869 2 0.22872197709829376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 28422 11623 FSEDPNEQELY True H1975_Epitope_Rep2 1369.56739059365 1369.5662899358601 49.776 2 0.22871182837200996 0.00036105427849320016 0.9438714419765777 ['ENSG00000109436|ENST00000442267|TBC1D9'] 8109 14739 ATEQAPLWAY True H1975_Epitope_Rep2 1148.5502244078798 1148.54912993586 61.854 2 0.22871145552112704 0.00036105427849320016 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000480324.5_1_1:111690336-111702181:+|nuORF'] 68801 6894 LVDQRVAEY True H1975_Epitope_Rep1 1091.56112344475 1091.56002993586 31.558 2 0.22871019240356963 0.00036105427849320016 0.9438714419765777 ['ENSG00000143157|ENST00000367876|POGK'] 16672 4918 EETQPPVALKK True NCI_RA007_Epitope_Rep2 1238.6870522338597 1238.6854049037902 23.75 3 0.22871016630417548 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000510079.2_1_4:79102753-79102939:-|nuORF'] 20823 15580 EQPETYYKW True PC9_epitope_Rep1 1242.5557037111398 1242.55460993586 64.75 2 0.22870354551710695 0.00036105427849320016 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1'] 22308 15909 ETEEDKFLLLY True H1975_Epitope_Rep2 1398.6918628307799 1398.69076993586 66.395 2 0.22869422973546702 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 132084 11074 VYIKHPVSL True PC9_epitope_Rep3 1054.61751612206 1054.61640993586 47.595 2 0.22869251303550078 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 93824 11423 RVDPIGPLSY True H1975_Epitope_Rep1 1115.59750895347 1115.59640993586 48.919 2 0.22868553796877727 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 69859 17149 LYANM[Oxidation]FERL True PC9_epitope_Rep1 1171.56958033391 1171.56848993586 70.786 2 0.22867023118341964 0.00036105427849320016 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 139294 9661 YTDKVVIGM True H1975_Epitope_Rep3 1024.52631815916 1024.5252299358601 42.18 2 0.2286691837886131 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 2303 5291 AEQAERYDDM True H1975_Epitope_Rep2 1226.48736645114 1226.48626993586 25.41 2 0.22866526244701046 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 108655 5410 TELDKIRQA True NCI_RA007_Epitope_Rep5 1072.58767254576 1072.58656993586 27.498 2 0.22864520225875531 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 113598 9259 TRAQIEDTL True PC9_epitope_Rep2 1045.54038800017 1045.53928993586 40.953 2 0.22863384991556648 0.00036105427849320016 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 114389 5342 TSDNGKDGLAY True H1975_Epitope_Rep2 1139.50948179471 1139.5083899358601 25.597 2 0.228619332258569 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105325|Q9UM11-3|FZR1', 'ENSG00000105325|ENST00000441788|FZR1', 'nc|ENSG00000105325|Q9UM11|FZR1'] 128448 16894 VSEPRYFQL True PC9_epitope_Rep4 1137.5818588893299 1137.5807699358602 72.968 2 0.22861605969095633 0.00036105427849320016 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF', 'ENST00000478389.5_1_20:57566845-57568278:+|nuORF'] 11836 16184 DHMRFISEL True PC9_epitope_Rep4 1146.54917886206 1146.5480899358602 70.195 2 0.22861090635215386 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 116141 11440 TVTDFPGFDER True H1975_Epitope_Rep1 1282.5829810881398 1282.58188993586 48.983 2 0.22860498061485116 0.00036105427849320016 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 16777 6059 EFFNGKEPSR True NCI_RA007_Epitope_Rep2 1209.5778361380496 1209.57619490379 28.173 3 0.22860371246228503 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 46830 10054 IVEIPFNSTNK True H1975_Epitope_Rep1 1260.67140216972 1260.6703099358601 43.613 2 0.22860023167486304 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 95445 21311 SALPDIKVLTL True PC9_epitope_Rep1 1168.7067250492798 1168.70562993586 86.801 2 0.22859592466724601 0.00036105427849320016 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 11637 10757 DHASIQMNV True PC9_epitope_Rep4 1013.46002950449 1013.4589299358599 49.134 2 0.22859475021416256 0.00036105427849320016 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 113409 21586 TQLNMFQTL True PC9_epitope_Rep5 1094.54303085246 1094.54192993586 88.071 2 0.22859031436748511 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 87754 20552 QVFPGLLERV True PC9_epitope_Rep5 1156.6604435631998 1156.65934993586 84.099 2 0.22858690122865957 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 8304 17743 ATLKELTSL True PC9_epitope_Rep3 974.56481184286 974.56370993586 73.445 2 0.2285781397862682 0.00036105427849320016 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 95838 4386 [Acetylation]-SDKPDM[Oxidation]AEIEK True H1975_Epitope_Rep3 1319.5914978632497 1319.59038993586 21.991 2 0.2285759366992866 0.00036105427849320016 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 24736 17788 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.4960299358602 73.218 2 0.22857576161030704 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 133305 12224 WEQDGGRWLP True H1975_Epitope_Rep3 1242.5781704912197 1242.5770699358602 52.192 2 0.22856585111668526 0.00036105427849320016 0.9438714419765777 ['ENSG00000166592|ENST00000299759|RRAD'] 47895 21375 IYVHDLLTF True PC9_epitope_Rep1 1119.59644632431 1119.5953499358602 87.051 2 0.22856577963966104 0.00036105427849320016 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 98288 4851 SIFKQPVTK True NCI_RA007_Epitope_Rep5 1046.61243074162 1046.61132993586 25.351 2 0.2285641663625538 0.00036105427849320016 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 111608 10801 TLNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep2 1189.6376598937302 1189.63656993586 46.617 2 0.22856340536273576 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 2316 5687 AEQAERYDDMA True H1975_Epitope_Rep3 1297.52448023585 1297.5233899358602 26.904 2 0.22855751543517722 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 88237 20721 QYEEQFVTL True PC9_epitope_Rep3 1155.5448046742697 1155.54370993586 84.978 2 0.22853255721248408 0.00036105427849320016 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 71549 5532 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 26.343 2 0.22852959584655214 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 129334 5766 VTDTDETELAR True NCI_RA007_Epitope_Rep2 1248.58337501096 1248.58226993586 27.045 2 0.22852856206356234 0.00036105427849320016 0.9438714419765777 ['ENSG00000134001|ENST00000256383|EIF2S1'] 23938 13486 EYNNNFHVL True PC9_epitope_Rep6 1148.5250722892001 1148.5239699358601 63.574 2 0.22851558550482476 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 14892 15451 DYKESFNTI True PC9_epitope_Rep1 1115.5135045459901 1115.5124099358602 64.253 2 0.22850637729584636 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 86675 17784 QRIDEFEAL True PC9_epitope_Rep1 1119.5560380643099 1119.5549499358601 73.203 2 0.22849891432213326 0.00036105427849320016 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 49348 20167 KIFDEILVNA True PC9_epitope_Rep2 1160.64412479272 1160.64302993586 82.985 2 0.22849301475715533 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 96398 13781 SEIDLLDIR True H1975_Epitope_Rep3 1072.57643915572 1072.57534993586 58.312 2 0.22849273019322236 0.00036105427849320016 0.9438714419765777 ['ENST00000505805.1_1_4:79518453-79531266:+|nuORF', 'ENSG00000138772|ENST00000264908|ANXA3'] 96430 8178 SEIESVKISA True H1975_Epitope_Rep3 1061.56045473841 1061.5593499358602 36.436 2 0.22849271100141083 0.00036105427849320016 0.9438714419765777 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU'] 135544 6298 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 29.292 2 0.2284824412023743 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 88602 13565 RALNQEQVIAV True PC9_epitope_Rep5 1239.6935345966301 1239.6924299358602 57.2 2 0.22848102717665839 0.00036105427849320016 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 23789 21196 EYLADLYHF True PC9_epitope_Rep5 1169.5393253710101 1169.53822993586 86.578 2 0.22847763977406899 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 11380 6237 DFHVDEQTTVK True H1975_Epitope_Rep1 1317.62009487285 1317.61898993586 29.058 2 0.2284655025318926 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 116888 18211 TYNYPVHYF True PC9_epitope_Rep5 1202.53965972418 1202.53856993586 75.06 2 0.22846187117443995 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 28367 14047 FSDLYNEVY True H1975_Epitope_Rep1 1148.50260550912 1148.5015099358602 59.196 2 0.22845765268534207 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 106595 15236 SVYVQLEKV True PC9_epitope_Rep3 1063.5913609438699 1063.59026993586 63.754 2 0.2284521699289156 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 124266 16170 VLDDKLYVV True PC9_epitope_Rep6 1062.5961119711399 1062.5950099358602 74.552 2 0.22841704263033863 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 27560 6953 FPLTTESAM[Oxidation]K True NCI_RA007_Epitope_Rep5 1139.55326156343 1139.55216993586 33.429 2 0.2284074522083596 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 23543 22079 EWSPYTKIFQF True PC9_epitope_Rep5 1444.7027022979998 1444.70160993586 89.957 2 0.2284040244706526 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 22883 5696 EVEVEVESM[Oxidation]DK True H1975_Epitope_Rep1 1308.5755131296398 1308.57440993586 26.976 2 0.22839996132352194 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 77139 15224 NYAWVYYHL True NCI_RA007_Epitope_Rep5 1227.57129420563 1227.57018993586 65.243 2 0.22837557956935103 0.00036105427849320016 0.9438714419765777 ['ENSG00000119917|ENST00000371818|IFIT3'] 111601 10029 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1189.6376598937302 1189.63656993586 43.515 2 0.2283694960299812 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 108311 12432 TEDGDSFLHLA True H1975_Epitope_Rep1 1203.54078192299 1203.53968993586 52.856 2 0.22836678005722902 0.00036105427849320016 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'NFKBIA|p.L131Wfs*33|1|0.1|ENSG00000100906|chr14:35403306-35403306|G/-|frameshift_variant', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 93936 21067 RVLELIPQI True PC9_epitope_Rep1 1079.6702799709099 1079.66918993586 85.867 2 0.22835575362910054 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000491987.1_1_22:35723272-35729230:+|nuORF', 'nc|ENSG00000100284|O60784-4|TOM1', 'nc|ENSG00000100284|O60784-2|TOM1', 'ENST00000404284.6_1_22:35717823-35727385:+|nuORF'] 24048 6090 EYQELM[Oxidation]NVK True H1975_Epitope_Rep3 1168.5434251557197 1168.5423299358602 28.437 2 0.22835165712112698 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 42048 10194 IEEDIRDLAA True H1975_Epitope_Rep1 1143.57716743171 1143.57606993586 44.151 2 0.22834674823316078 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 53780 21882 KYFGGVLEYF True PC9_epitope_Rep1 1221.6070110080097 1221.6059099358602 88.982 2 0.22833904098137647 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 116580 13700 TYGEIFEKF True NCI_RA007_Epitope_Rep5 1132.54407639828 1132.5429699358601 59.383 2 0.22833087071144895 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 112242 17195 TLYERGFENI True PC9_epitope_Rep5 1240.6088019131598 1240.6077099358602 71.161 2 0.22832067144389212 0.00036105427849320016 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 137136 13595 YLDKEDTFFY True H1975_Epitope_Rep2 1339.5972341699498 1339.59612993586 57.429 2 0.22830697790104654 0.00036105427849320016 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 56670 6973 LEAANGELEVK True H1975_Epitope_Rep1 1171.6084675599898 1171.60736993586 31.862 2 0.22829724934982756 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 138028 16384 YQDLLQLQY True H1975_Epitope_Rep2 1182.5920892198599 1182.59098993586 68.242 2 0.22828259985441718 0.00036105427849320016 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENST00000561086.1_1_15:91040446-91043337:+|nuORF', 'ENSG00000140575|ENST00000268182|IQGAP1'] 23758 12279 EYIQKNVQL True PC9_epitope_Rep5 1133.6080736371698 1133.6069699358602 52.219 2 0.2282739698728999 0.00036105427849320016 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 44060 21734 ILLKDILSV True PC9_epitope_Rep1 1012.65323292444 1012.65212993586 88.431 2 0.22827137830747998 0.00036105427849320016 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant', 'ATM|p.Q1116Sfs*10|1|0.39|ENSG00000149311|chr11:108279550-108279550|T/-|frameshift_variant'] 33772 7985 GLSQSALPYR True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 37.401 2 0.22826939496364668 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 106910 20330 SYIRPEDIVNF True PC9_epitope_Rep2 1351.67721582615 1351.67610993586 83.622 2 0.22826835680105206 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 6887 16334 AQIKPFYTV True PC9_epitope_Rep1 1065.5858816406098 1065.58478993586 67.647 2 0.22826646064075018 0.00036105427849320016 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 138113 15898 YQHGIFQSI True PC9_epitope_Rep2 1091.53999407735 1091.5388899358602 66.405 2 0.22826094602164035 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1'] 136552 13185 YHSEVPVSL True PC9_epitope_Rep4 1029.51311062317 1029.51200993586 58.613 2 0.22823954376835576 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 72279 13514 M[Oxidation]SDSYLPSYY True H1975_Epitope_Rep2 1240.4958062569601 1240.49470993586 57.117 2 0.22823592441362492 0.00036105427849320016 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 36096 8162 GVEGSLIVEK True NCI_RA007_Epitope_Rep1 1029.57062549929 1029.5695299358601 35.747 2 0.22823285421160386 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 63383 13774 LPFPIIDDR True H1975_Epitope_Rep3 1084.59169529704 1084.5905899358602 58.284 2 0.2282288300684461 0.00036105427849320016 0.9438714419765777 ['ENSG00000117592|ENST00000340385|PRDX6'] 133338 9211 WEVDVTGKEA True NCI_RA007_Epitope_Rep4 1132.540053647 1132.53894993586 42.277 2 0.2282194266873093 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 67601 11663 LTEVDNYHFY True H1975_Epitope_Rep1 1299.5771674317102 1299.57606993586 49.851 2 0.22821881695571733 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 103002 14944 SQITAIEAQHL True PC9_epitope_Rep1 1209.63535101417 1209.63424993586 62.304 2 0.2282184838868478 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 44248 14308 ILTERGYSF True PC9_epitope_Rep4 1084.55530978832 1084.5542099358602 62.935 2 0.22821758137607762 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 42374 9869 IENGHIFTV True H1975_Epitope_Rep1 1028.52909504048 1028.5279899358602 42.894 2 0.22821543092432187 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'SPAG16-CUL3|1|fusion'] 28306 15429 FRYPTTEEL True PC9_epitope_Rep2 1154.5607890915799 1154.5596899358602 64.625 2 0.22821269174564437 0.00036105427849320016 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 104797 8257 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.5331499358601 36.712 2 0.22820913781005014 0.00036105427849320016 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 134101 11680 WQYRQLSAL True NCI_RA007_Epitope_Rep3 1163.60874234351 1163.60764993586 53.06 2 0.22819595852906507 0.00036105427849320016 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 107309 13248 SYREDPIVY True PC9_epitope_Rep1 1140.5451390274397 1140.5440499358601 55.824 2 0.22819580981165366 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 110525 4062 TIQSGEQPYK True NCI_RA007_Epitope_Rep5 1149.56660274801 1149.56550993586 22.069 2 0.2281916338015014 0.00036105427849320016 0.9438714419765777 ['ENSG00000168653|ENST00000372969|NDUFS5'] 27337 8305 FMEKETPLRY True H1975_Epitope_Rep2 1312.6485585501598 1312.64692490379 36.897 3 0.22817946668594588 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1'] 8809 22061 AVFPDDMPTL True PC9_epitope_Rep5 1104.51614739828 1104.5150499358601 89.885 2 0.2281776858370251 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 113302 15220 TQIDHYVGI True PC9_epitope_Rep5 1044.52400966004 1044.52290993586 63.552 2 0.2281602919728844 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 21120 20833 ERDPVLWSL True PC9_epitope_Rep1 1113.58185888933 1113.5807699358602 84.961 2 0.2281481631100029 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 94780 18463 RYLPTGSFPF True PC9_epitope_Rep6 1183.6025943339098 1183.6014899358602 83.658 2 0.22813720032231216 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 21375 6916 ERMAGNEAL True PC9_epitope_Rep1 989.4600295044899 989.4589299358599 31.408 2 0.2281158782774549 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 104740 7844 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58028490379 35.148 3 0.22811197648207548 0.00036105427849320016 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 10041 8074 AYVEKVERL True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 36.416 2 0.22810894538376703 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 33268 13448 GLAPPQHLIRV True PC9_epitope_Rep2 1199.71387611839 1199.71222490379 57.007 3 0.22810517325400373 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53'] 71715 4401 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 22.049 2 0.2281010652012728 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 136101 13960 YGEPGEVFINK True PC9_epitope_Rep2 1251.6135529404298 1251.61244993586 58.972 2 0.22809763980117553 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 135227 13119 YAYDGKDYL True PC9_epitope_Rep4 1106.4920408254197 1106.49094993586 58.356 2 0.2280848400101544 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 97073 10905 SEYLRYEDTL True H1975_Epitope_Rep3 1287.59829679911 1287.5971899358601 47.033 2 0.2280808433771569 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 84569 18123 QHDFTSQIF True PC9_epitope_Rep1 1121.51417325233 1121.5130699358601 74.501 2 0.2280350120995061 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 54387 10628 KYQKGFSLW True NCI_RA007_Epitope_Rep4 1155.6076797143498 1155.60658993586 47.728 2 0.22803108549797324 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 117135 17172 TYSPALNKMF True PC9_epitope_Rep4 1170.5743309807401 1170.5732299358601 74.058 2 0.22802727375279866 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 47237 19768 IYDSVKVYF True PC9_epitope_Rep5 1132.5804619069997 1132.57936993586 81.082 2 0.22797979021646064 0.00036105427849320016 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 47399 12628 IYIKHPHLF True PC9_epitope_Rep2 1166.66004964038 1166.6584049037901 53.883 3 0.22797865010844484 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 114901 6797 TTESEVMKY True H1975_Epitope_Rep3 1086.4903265732598 1086.48922993586 31.098 2 0.2279717652431202 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 32223 20833 GFGFVTFDDHD True PC9_epitope_Rep5 1255.51456717515 1255.51346993586 85.183 2 0.22797160525474106 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 27808 10585 FQESSVKEL True PC9_epitope_Rep5 1065.5342399905699 1065.5331499358601 45.703 2 0.22796487031138118 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 4680 9658 ALDFIASK True NCI_RA007_Epitope_Rep2 863.47526856247 863.47416993586 42.184 2 0.22795715066147834 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 8098 5426 ATELTHEDY True H1975_Epitope_Rep2 1077.46146897313 1077.4603699358602 25.897 2 0.22795337360703813 0.00036105427849320016 0.9438714419765777 ['ENSG00000165916|ENST00000298852|PSMC3'] 132907 19311 VYTTTVHWL True PC9_epitope_Rep1 1118.5760452329 1118.57494993586 79.085 2 0.22794910142252175 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 77114 19176 NYAQVLDKF True PC9_epitope_Rep5 1096.5553097883198 1096.5542099358602 78.797 2 0.22794850804889635 0.00036105427849320016 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 138923 5388 YSEEECRQY True H1975_Epitope_Rep3 1205.46590273057 1205.46480993586 25.79 2 0.22794385758786878 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 23977 19075 EYPDRIMNTF True PC9_epitope_Rep3 1284.5808729131597 1284.5797699358602 78.595 2 0.22794183318628122 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 16934 10058 EGEFVAQFK True NCI_RA007_Epitope_Rep1 1053.5131106231697 1053.51200993586 43.131 2 0.22793964444605846 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 119789 7452 VEVEGDNRYIA True H1975_Epitope_Rep1 1263.6095301891498 1263.6084299358602 33.665 2 0.2279339495557128 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 28860 9164 FTDQQKLIY True H1975_Epitope_Rep1 1154.5971746002997 1154.5960699358602 40.154 2 0.2279315233042944 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 31575 10732 GEFSITYKP True NCI_RA007_Epitope_Rep1 1040.5178616504397 1040.51676993586 45.736 2 0.22792363389753625 0.00036105427849320016 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 116774 21996 TYLNWLVRM True PC9_epitope_Rep1 1194.6219498795 1194.6208499358602 89.429 2 0.22791772593823528 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 113041 6147 TPVEPEVAIHR True H1975_Epitope_Rep1 1246.6669854956199 1246.6653449037901 28.714 3 0.2279174471052971 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000008988|P60866-2|RPS20', 'ENST00000521289.5_1_8:56986544-56986942:-|nuORF', 'ENSG00000008988|ENST00000009589|RPS20'] 4770 9151 ALEEQLQQIR True NCI_RA007_Epitope_Rep4 1226.6619001151798 1226.66080993586 42.04 2 0.22791254781033035 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 37590 7045 GYSFTTTAER True NCI_RA007_Epitope_Rep4 1131.51965255559 1131.5185499358602 33.725 2 0.2279103621800672 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 113057 8964 TPVPSDIDISR True H1975_Epitope_Rep3 1198.61936659686 1198.61826993586 39.475 2 0.2278932458587901 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000413059.1_1_X:57420873-57421110:-|nuORF'] 79087 21151 PFVDHVFTF True PC9_epitope_Rep3 1107.53893144819 1107.5378299358601 86.643 2 0.22789278161633242 0.00036105427849320016 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 54298 16316 KYPSPFFVF True NCI_RA007_Epitope_Rep3 1130.5800679841798 1130.5789699358602 71.879 2 0.22788174281436735 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 14108 7844 DSDYHDENM[Oxidation]YY True H1975_Epitope_Rep1 1466.4932400576602 1466.4921499358602 35.122 2 0.2278760899676622 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 6709 5011 AQDEERQASL True PC9_epitope_Rep5 1145.53127986845 1145.53018993586 24.307 2 0.22786576233325181 0.00036105427849320016 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT'] 23931 15925 EYNNNFHVL True PC9_epitope_Rep3 1148.5250722892001 1148.5239699358601 66.403 2 0.22786368236676147 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 139320 7100 YTDQFSRNY True H1975_Epitope_Rep1 1192.51490152832 1192.51380993586 32.335 2 0.22785807668764566 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 39990 5920 HQRLEPATL True NCI_RA007_Epitope_Rep4 1063.57744221523 1063.5763499358602 29.393 2 0.2278567741556847 0.00036105427849320016 0.9438714419765777 ['ENSG00000121542|ENST00000492595|SEC22A'] 110976 8704 TLDDESLKY True H1975_Epitope_Rep2 1082.5131701928199 1082.5120699358602 38.441 2 0.22785500284104468 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 94619 20544 RYLDEINLL True PC9_epitope_Rep2 1147.62372370131 1147.62262993586 84.455 2 0.22785260882733901 0.00036105427849320016 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 9083 19609 AVLDDKLYVV True PC9_epitope_Rep3 1133.63322575585 1133.6321299358601 80.663 2 0.22784620430697336 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 24413 14312 FAFVTFDDHD True NCI_RA007_Epitope_Rep4 1212.50875351872 1212.5076499358602 62.355 2 0.2278436482100571 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 137405 21217 YLLPAIVHI True PC9_epitope_Rep2 1037.62735252977 1037.62677496793 87.069 1 0.2278130971261066 0.00036105427849320016 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 133515 18311 WHEDITQDL True PC9_epitope_Rep5 1155.5196525555898 1155.5185499358602 75.448 2 0.22780966903616817 0.00036105427849320016 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 135563 7642 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 34.346 2 0.22780125118583439 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 135838 15028 YEQLMQLYSA True H1975_Epitope_Rep3 1244.57472490356 1244.57362993586 63.196 2 0.22780114361784526 0.00036105427849320016 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15'] 8420 7043 ATQTQFFHVK True NCI_RA007_Epitope_Rep4 1205.61930702721 1205.61766490379 33.717 3 0.22779919657793465 0.00036105427849320016 0.9438714419765777 ['KIRREL-PYHIN1|2|fusion', 'KIRREL-PYHIN1|1|fusion', 'ENST00000485134.1_1_1:158911778-158914889:+|nuORF', 'nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16', 'nc|ENSG00000163564|Q6K0P9-4|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-2|PYHIN1', 'ENSG00000163564|ENST00000368140|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-3|PYHIN1'] 64977 7531 LSDDLHVERY True H1975_Epitope_Rep2 1245.59896550545 1245.59731490379 33.919 3 0.22779556440284096 0.00036105427849320016 0.9438714419765777 ['ENSG00000162910|ENST00000336520|MRPL55', 'nc|ENSG00000162910|Q7Z7F7-2|MRPL55'] 7868 6302 ATANQIILK True NCI_RA007_Epitope_Rep3 970.58113061334 970.58002993586 31.79 2 0.2277814708927475 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 23920 18950 EYNNIFHTF True PC9_epitope_Rep4 1183.52982331647 1183.5287299358602 80.979 2 0.2277534995566021 0.00036105427849320016 0.9438714419765777 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 138422 11691 YRDPYTGQSV True PC9_epitope_Rep5 1184.5462016566 1184.5451099358602 49.966 2 0.22774045622712635 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 102908 16874 SQIEADFRL True PC9_epitope_Rep5 1077.54547338061 1077.54436993586 69.916 2 0.22773789838380554 0.00036105427849320016 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 11870 19127 DHNLLLYEA True PC9_epitope_Rep5 1086.53457434374 1086.53346993586 78.606 2 0.2277365942229687 0.00036105427849320016 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 106038 15438 SVLQLGNIVFK True NCI_RA007_Epitope_Rep5 1216.71795843932 1216.7168699358601 66.084 2 0.22772789418682424 0.00036105427849320016 0.9438714419765777 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 127570 21475 VQWENSFVSV True PC9_epitope_Rep1 1193.57168812845 1193.5705899358602 87.445 2 0.2277273260735246 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 6891 16567 AQIKPFYTV True PC9_epitope_Rep3 1065.5858816406098 1065.58478993586 68.864 2 0.2277262852455457 0.00036105427849320016 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 54050 19318 KYLSVQGQLF True PC9_epitope_Rep5 1181.64445914589 1181.6433699358602 79.351 2 0.22771851508988547 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 70389 19752 LYQEVFGRL True PC9_epitope_Rep5 1123.6025943339098 1123.6014899358602 81.022 2 0.22770746496330754 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 97408 21979 [Acetylation]-SGFLEELLGEK True H1975_Epitope_Rep1 1262.6394336513997 1262.6383299358602 91.427 2 0.22769680372451462 0.00036105427849320016 0.9438714419765777 ['ENSG00000167693|ENST00000336868|NXN'] 94996 13948 RYQDIIHSI True PC9_epitope_Rep2 1143.6036569630699 1143.6020249037902 58.928 3 0.2276665419741003 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 30181 18919 FYTVIPHNF True PC9_epitope_Rep4 1136.5654805492 1136.5643899358602 80.858 2 0.2276659429940429 0.00036105427849320016 0.9438714419765777 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 1576 13025 AEFARIMSI True NCI_RA007_Epitope_Rep5 1036.5375515491999 1036.5364499358602 56.778 2 0.2276360842225405 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 14886 22137 DYILNVMKF True PC9_epitope_Rep1 1141.58416738845 1141.58306993586 89.963 2 0.2276346315161708 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 24161 17474 EYTDVLQKI True PC9_epitope_Rep4 1107.58119018299 1107.58008993586 75.213 2 0.22762918963780948 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 40914 17615 HVVDFFNRV True PC9_epitope_Rep1 1131.58252759567 1131.5814299358601 72.548 2 0.22762188248653017 0.00036105427849320016 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A'] 23962 12720 EYPDRIMNTF True NCI_RA007_Epitope_Rep1 1284.5808729131597 1284.5797699358602 53.463 2 0.227595735655198 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 21 16470 [Acetylation]-AAAAELSLLEK True H1975_Epitope_Rep1 1156.63395434814 1156.6328499358601 68.72 2 0.22758933008673365 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124802|O43324-2|EEF1E1', 'ENSG00000124802|ENST00000379715|EEF1E1'] 23841 22240 EYLPIGGLAEF True PC9_epitope_Rep4 1207.6124903112698 1207.6113899358602 93.783 2 0.22758519262853405 0.00036105427849320016 0.9438714419765777 ['CNOT1-GOT2|1|fusion', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2'] 56205 19347 LDPHLVLDQLR True PC9_epitope_Rep2 1317.7404847890498 1317.7393899358601 79.793 2 0.22758512453618596 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 53435 13155 KVIDDTNITRL True PC9_epitope_Rep5 1286.7194149913 1286.7183099358601 55.605 2 0.22757136757243063 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 87456 4683 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 23.109 2 0.22756231657138035 0.00036105427849320016 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 48603 10652 KEIEIDIEP True NCI_RA007_Epitope_Rep3 1084.5652057656798 1084.5641099358602 48.947 2 0.22754627588734413 0.00036105427849320016 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 41034 10712 HYILHNSFF True NCI_RA007_Epitope_Rep3 1176.5716285587998 1176.5705299358601 49.182 2 0.22752778474380145 0.00036105427849320016 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 2157 9744 AEMDERFQQI True H1975_Epitope_Rep2 1265.57103650545 1265.56992993586 42.468 2 0.2275238655677578 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148356|Q6UWE0-2|LRSAM1', 'ENSG00000148356|ENST00000300417|LRSAM1', 'nc|ENSG00000148356|Q6UWE0-3|LRSAM1', 'ENST00000483302.5_1_9:130248105-130265175:+|nuORF'] 70388 18654 LYQEVFGRL True PC9_epitope_Rep4 1123.6025943339098 1123.6014899358602 79.829 2 0.2275232216353236 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 2344 5568 AEQEEEVQRAV True H1975_Epitope_Rep3 1286.61025846514 1286.60916993586 26.458 2 0.22750374204123114 0.00036105427849320016 0.9438714419765777 ['ENST00000531121.5_1_11:65686926-65687405:+|nuORF'] 39866 12890 HQIEAVDGEEL True PC9_epitope_Rep1 1238.5778957076998 1238.57678993586 54.455 2 0.22749677358057852 0.00036105427849320016 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 14088 6174 DSDRGLQEGY True H1975_Epitope_Rep3 1138.4890807032998 1138.48798993586 28.759 2 0.2274916182713854 0.00036105427849320016 0.9438714419765777 ['ENSG00000175931|ENST00000319380|UBE2O'] 48466 6425 KEENPEIAVSA True H1975_Epitope_Rep2 1185.5877321154098 1185.5866299358602 29.634 2 0.22748835130447084 0.00036105427849320016 0.9438714419765777 ['ENST00000487143.5_1_2:168812008-168969496:-|nuORF', 'nc|ENSG00000198648|Q9UEW8-2|STK39', 'ENSG00000198648|ENST00000355999|STK39'] 84696 15254 QHFDSVMQL True PC9_epitope_Rep6 1103.5069796969099 1103.50588993586 70.783 2 0.22748031850200365 0.00036105427849320016 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 108533 5263 TEFTPTEKDE True NCI_RA007_Epitope_Rep4 1195.52446315251 1195.52336993586 26.79 2 0.2274796425885227 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 113291 15290 TQIDHYVGI True PC9_epitope_Rep1 1044.52400966004 1044.52290993586 63.634 2 0.22747182984236827 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 54347 7582 KYQEVTNNL True PC9_epitope_Rep4 1107.5560380643099 1107.5549499358601 36.544 2 0.22743745732340348 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 773 7269 AAYEAELGDAR True NCI_RA007_Epitope_Rep2 1164.54111627616 1164.54000993586 32.895 2 0.2274372643045107 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 8790 6805 AVFDGAQVTSK True NCI_RA007_Epitope_Rep4 1121.57168812845 1121.5705899358602 32.8 2 0.2274363449372921 0.00036105427849320016 0.9438714419765777 ['ENSG00000175274|ENST00000525680|TP53I11'] 107428 7220 SYTSVKENF True NCI_RA007_Epitope_Rep4 1073.5029398622898 1073.50184993586 34.405 2 0.22743307224201118 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 86709 11291 QRIIQQETL True PC9_epitope_Rep1 1127.62987171091 1127.6287699358602 48.311 2 0.22742849781826718 0.00036105427849320016 0.9438714419765777 ['ENSG00000180182|ENST00000324817|MED14'] 138821 8202 YSDKYFDEHY True H1975_Epitope_Rep2 1365.55134660669 1365.5502499358602 36.502 2 0.22742425043960016 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 106970 18080 SYLEKQVVTF True PC9_epitope_Rep5 1212.6390394122798 1212.6379499358602 74.558 2 0.22742294423257106 0.00036105427849320016 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 96734 11234 SEQGINEFLR True NCI_RA007_Epitope_Rep1 1191.58840082175 1191.58730993586 47.697 2 0.22741030176377153 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 53703 19534 KYDEIFYNL True PC9_epitope_Rep4 1203.5811901829898 1203.58008993586 83.259 2 0.22740858588529855 0.00036105427849320016 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 44963 19922 IQHDLIFSL True PC9_epitope_Rep4 1084.5916952970401 1084.5905899358602 84.764 2 0.22740594092528046 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 72294 4490 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 22.384 2 0.22740163081515574 0.00036105427849320016 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 71977 12953 MPWGDPNYRSA True PC9_epitope_Rep6 1292.5608061749201 1292.5597099358602 61.375 2 0.2273979078180298 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 47284 19891 IYFEYSHAF True PC9_epitope_Rep5 1175.52876068731 1175.52766993586 81.563 2 0.2273854543116135 0.00036105427849320016 0.9438714419765777 ['ENSG00000113318|ENST00000265081|MSH3'] 73319 12020 NELESYAYSLK True NCI_RA007_Epitope_Rep1 1315.62959692739 1315.6284899358602 50.742 2 0.22737684745440961 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 41588 9240 IDEPLEGSEDR True PC9_epitope_Rep5 1258.56772494682 1258.5666299358602 40.489 2 0.22736271636043723 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 135228 14350 YAYDGKDYL True PC9_epitope_Rep5 1106.4920408254197 1106.49094993586 60.198 2 0.22736237573379953 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 90337 9945 RIIDLVLQK True NCI_RA007_Epitope_Rep3 1096.6968290719199 1096.69572993586 46.2 2 0.22735550742011437 0.00036105427849320016 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 77357 21600 NYLLYVSNF True PC9_epitope_Rep4 1131.5600608155898 1131.5589699358602 91.269 2 0.22735389101216683 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 104789 8768 STDPREALQY True H1975_Epitope_Rep2 1178.5567663402999 1178.5556699358601 38.69 2 0.22733332603328144 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 88282 19034 QYGGDLTNTF True PC9_epitope_Rep5 1114.49310345458 1114.49200993586 78.242 2 0.22733292806235386 0.00036105427849320016 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 132270 19861 VYLDHAGATLF True PC9_epitope_Rep3 1205.6080736371698 1205.6069699358602 81.632 2 0.2273252047517208 0.00036105427849320016 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 17710 17771 EHSLVIDTL True PC9_epitope_Rep1 1025.53932537101 1025.53822993586 73.152 2 0.22731989937353286 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 15041 7004 EAAENSLVAYK True H1975_Epitope_Rep1 1193.5928174958497 1193.59172993586 31.976 2 0.22731977450166016 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE'] 91620 11720 RPFEDQTSL True PC9_epitope_Rep1 1091.52473793603 1091.52364993586 49.956 2 0.22731748651900172 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 29640 21818 FVLPVATQI True PC9_epitope_Rep2 986.58006798418 986.57896993586 89.396 2 0.22731422885588293 0.00036105427849320016 0.9438714419765777 ['ENSG00000111678|ENST00000229281|C12orf57'] 86745 20259 QRLETILSL True PC9_epitope_Rep5 1071.62880908175 1071.6277099358601 82.975 2 0.2273092290247126 0.00036105427849320016 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 134811 18176 WYQTKFETL True PC9_epitope_Rep2 1214.5971746002997 1214.5960699358602 75.219 2 0.22730818939214442 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 77390 20207 NYLSIFRKF True PC9_epitope_Rep3 1186.6498788795 1186.6482449037899 82.984 3 0.2273040813108558 0.00036105427849320016 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 95034 11368 RYQTQPVTL True PC9_epitope_Rep3 1104.5927579261997 1104.5916699358602 48.731 2 0.2273024345944033 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 127122 17734 VQDEFLEKL True PC9_epitope_Rep4 1119.5811901829898 1119.58008993586 76.236 2 0.2272938959189043 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 17353 6852 EHDTTEYKL True PC9_epitope_Rep1 1134.51931820242 1134.51766490379 31.163 3 0.22728544609310763 0.00036105427849320016 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 45562 9087 ISGLIYEETR True NCI_RA007_Epitope_Rep3 1179.6135529404298 1179.61244993586 42.832 2 0.22728352758073037 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 71717 4700 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 23.204 2 0.2272742563768203 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 96953 10383 SEVEVIHVP True H1975_Epitope_Rep2 1007.52876068731 1007.52766993586 44.949 2 0.22727184283516305 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 89497 4616 REQPPTGGNLA True H1975_Epitope_Rep2 1138.57308511078 1138.57198993586 22.857 2 0.22726563311224848 0.00036105427849320016 0.9438714419765777 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 64027 4404 LQDEIQNM[Oxidation]K True NCI_RA007_Epitope_Rep2 1133.5386741284499 1133.5375699358601 21.766 2 0.22725798113582765 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 87886 18006 QVLPHLLEV True PC9_epitope_Rep6 1046.6124307416198 1046.61132993586 81.888 2 0.2272302268272852 0.00036105427849320016 0.9438714419765777 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 135528 9250 YEEDSYSHIMA True H1975_Epitope_Rep3 1343.53398229039 1343.53288993586 40.572 2 0.22722450894557145 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 24118 7109 EYSKQMQRF True PC9_epitope_Rep1 1215.57064258263 1215.56954993586 32.154 2 0.22721442110526083 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 24165 16424 EYTDVLQKI True PC9_epitope_Rep6 1107.58119018299 1107.58008993586 75.579 2 0.22721302257951886 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 17717 16280 EHSLVIDTL True PC9_epitope_Rep4 1025.53932537101 1025.53822993586 70.578 2 0.22721104000354225 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 67360 7686 LTDRGVMSY True H1975_Epitope_Rep2 1040.49608066004 1040.49498993586 34.516 2 0.22720423472327744 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 54108 7159 KYMEDYHQF True NCI_RA007_Epitope_Rep3 1259.52810906431 1259.5264649037902 35.277 3 0.22720315049947531 0.00036105427849320016 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 131683 19568 VWMRSPLSTF True PC9_epitope_Rep4 1222.61686449906 1222.61576993586 83.391 2 0.22718744758967835 0.00036105427849320016 0.9438714419765777 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF', 'chr15:60364523-60370591|201|71.34|0.76|6.56|-|0|ANXA2,None|1', 'chr15:60364523-60366446|150|115.17|0.14|9.65|-|0|TE_info:SVA_E,SVA_E_dup534,SVA,Retroposon,donor,+,60366446,60366898|ANXA2,None|4'] 49378 19800 KIIDIFTTL True PC9_epitope_Rep6 1062.6324974798601 1062.6314099358601 88.82 2 0.22718440827208586 0.00036105427849320016 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant', 'DNAH5|p.A481T|1|0.13|ENSG00000039139|chr5:13913838-13913838|C/T|missense_variant'] 96284 5513 SEETLDEGPPK True NCI_RA007_Epitope_Rep2 1200.55101225352 1200.5499099358601 26.059 2 0.22717572588764456 0.00036105427849320016 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 38033 4506 HEISEGNVATA True H1975_Epitope_Rep2 1126.52546621202 1126.52436993586 22.444 2 0.2271374926223884 0.00036105427849320016 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1'] 8242 14789 ATIIDILTK True NCI_RA007_Epitope_Rep5 986.60119735158 986.6006449679301 63.558 1 0.2271214557419903 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 48490 7661 KEFENPEVP True H1975_Epitope_Rep2 1087.51858992643 1087.51748993586 34.423 2 0.2271172665014273 0.00036105427849320016 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'RAD21-EIF3H|4|fusion'] 9988 10663 AYSSYVHQY True PC9_epitope_Rep1 1116.48762415132 1116.48652993586 45.905 2 0.22711268669517667 0.00036105427849320016 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 23999 16858 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 70.092 2 0.22710567825081804 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 42050 10335 IEEDIRDLAA True H1975_Epitope_Rep2 1143.57716743171 1143.57606993586 44.762 2 0.22708524176151762 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 93953 12759 RVLQALEGLK True PC9_epitope_Rep2 1125.6869926642098 1125.6853349037901 54.382 3 0.22708424035506228 0.00036105427849320016 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 114871 10728 TTDPYLTNSY True H1975_Epitope_Rep2 1173.5189838492502 1173.51847496793 46.292 1 0.22707368026285876 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 69473 7643 LVSESSDVLPK True H1975_Epitope_Rep1 1172.6288686514001 1172.6277699358602 34.381 2 0.22707103371438608 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 132082 9249 VYIKHPVSL True PC9_epitope_Rep2 1054.61751612206 1054.61640993586 40.916 2 0.22706331086947149 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 31945 12088 GESDDSILRLA True H1975_Epitope_Rep2 1174.58298108814 1174.58188993586 51.579 2 0.22705769677298845 0.00036105427849320016 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 114476 11891 TSETPDYLLKY True H1975_Epitope_Rep2 1328.6499980188 1328.64890993586 50.82 2 0.2270496210804679 0.00036105427849320016 0.9438714419765777 ['ENSG00000105656|ENST00000262809|ELL'] 23898 8200 EYMKHTRLF True PC9_epitope_Rep6 1223.6121134717898 1223.61046490379 41.113 3 0.2270438085876104 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 84233 4695 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 23.153 2 0.22703659686932726 0.00036105427849320016 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 131680 20724 VWMRSPLSTF True PC9_epitope_Rep1 1222.61686449906 1222.61576993586 84.54 2 0.2270333614955849 0.00036105427849320016 0.9438714419765777 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF', 'chr15:60364523-60370591|201|71.34|0.76|6.56|-|0|ANXA2,None|1', 'chr15:60364523-60366446|150|115.17|0.14|9.65|-|0|TE_info:SVA_E,SVA_E_dup534,SVA,Retroposon,donor,+,60366446,60366898|ANXA2,None|4'] 37453 19333 GWYDEEHPLVF True PC9_epitope_Rep6 1390.6193665968601 1390.61826993586 87.013 2 0.22702816459773595 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 107152 17475 SYNDYVREF True PC9_epitope_Rep1 1191.51965255559 1191.5185499358602 72.014 2 0.22702411388766464 0.00036105427849320016 0.9438714419765777 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1'] 113914 15018 TRIGLETSL True PC9_epitope_Rep5 988.55530978832 988.55420993586 62.769 2 0.22702338755831694 0.00036105427849320016 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 116456 5100 TYAEKLHRL True NCI_RA007_Epitope_Rep4 1129.62439240765 1129.6227449037901 26.123 3 0.2270113949846943 0.00036105427849320016 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 124454 7549 VLETAEDIQER True NCI_RA007_Epitope_Rep1 1301.6463096206896 1301.64520993586 33.358 2 0.22701085148101072 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 109990 19629 THSQFIVVSL True PC9_epitope_Rep2 1129.6131590176099 1129.61206993586 80.887 2 0.22700145308674763 0.00036105427849320016 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 77463 14870 NYPETLGRLLI True NCI_RA007_Epitope_Rep3 1287.7186867153098 1287.7175899358601 65.924 2 0.2269875750440545 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 93625 6116 RTDTGEITSY True H1975_Epitope_Rep2 1141.5251318588498 1141.5240299358602 28.504 2 0.22697004691513498 0.00036105427849320016 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF', 'RERE|p.D360Gfs*12|1|0.28|ENSG00000142599|chr1:8495088-8495089|-/C|frameshift_variant'] 38079 2947 HENESVYKA True H1975_Epitope_Rep2 1075.4934378077498 1075.4923499358601 15.576 2 0.22695174273579652 0.00036105427849320016 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000578492.5_1_17:62746826-62750158:-|nuORF'] 38045 6613 HELEETTVP True H1975_Epitope_Rep2 1053.49785448185 1053.4967499358602 30.345 2 0.22695115278517358 0.00036105427849320016 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 4796 16602 ALELDSNLYR True PC9_epitope_Rep1 1192.60880191316 1192.6077099358602 68.684 2 0.22694680123285743 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 129132 5441 VTDALNATR True PC9_epitope_Rep3 959.50360856863 959.50250993586 26.002 2 0.22693876788160963 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 133240 8006 WEEERNFGA True H1975_Epitope_Rep3 1136.4886867804798 1136.4875899358601 35.766 2 0.22691620295562343 0.00036105427849320016 0.9438714419765777 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000515226.5_1_5:71524027-71524234:-|nuORF', 'ENST00000522562.5_1_5:71523001-71533927:-|nuORF'] 73317 11306 NELESYAYSLK True H1975_Epitope_Rep1 1315.62959692739 1315.6284899358602 48.466 2 0.22691409110512686 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 28377 13408 FSDPGQPMSF True H1975_Epitope_Rep2 1111.46444617859 1111.4633499358602 56.71 2 0.2269130442961091 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000205531|Q99733-2|NAP1L4', 'ENSG00000205531|ENST00000380542|NAP1L4', 'ENST00000528363.5_1_11:2975753-2985939:-|nuORF'] 53732 21008 KYEELFPAF True PC9_epitope_Rep5 1142.5648118428596 1142.56370993586 85.864 2 0.22691242884899043 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 72291 4214 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 21.318 2 0.22690654641322297 0.00036105427849320016 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 87442 11423 QTELENQLEY True H1975_Epitope_Rep3 1265.5775613545297 1265.5764699358601 49.055 2 0.22689356081734854 0.00036105427849320016 0.9438714419765777 ['ENSG00000135090|ENST00000392533|TAOK3'] 54389 10376 KYQKGFSLW True NCI_RA007_Epitope_Rep5 1155.6076797143498 1155.60658993586 46.539 2 0.22689258397194595 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 116664 16581 TYIPVPAKI True PC9_epitope_Rep2 1000.5957180483199 1000.59462993586 69.016 2 0.22689153243896606 0.00036105427849320016 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 128758 5112 VSQEPFPNK True NCI_RA007_Epitope_Rep4 1044.5240096600398 1044.52290993586 26.175 2 0.22688816024430067 0.00036105427849320016 0.9438714419765777 ['ENSG00000134986|ENST00000257435|NREP', 'ENST00000507742.5_1_5:111066620-111092910:-|nuORF', 'nc|ENSG00000134986|Q16612-2|NREP'] 17719 17591 EHSLVIDTL True PC9_epitope_Rep5 1025.53932537101 1025.53822993586 72.672 2 0.22686928883119475 0.00036105427849320016 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 93842 18999 RVFIGNLNTL True PC9_epitope_Rep2 1145.65569253593 1145.65458993586 78.446 2 0.22686819491346122 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 102712 17347 SQDSFYRVL True PC9_epitope_Rep5 1113.54547338061 1113.54436993586 71.723 2 0.22686210511223664 0.00036105427849320016 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 114807 14296 TTDELEKLLY True H1975_Epitope_Rep2 1223.62853429823 1223.6274299358602 60.14 2 0.22685330329393366 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1'] 47861 15550 IYTKIMDLI True NCI_RA007_Epitope_Rep5 1108.620218544 1108.6191299358602 66.512 2 0.22683793862528476 0.00036105427849320016 0.9438714419765777 ['ENSG00000173852|ENST00000638088|DPY19L1', 'nc|ENSG00000173852|Q2PZI1|DPY19L1', 'DPY19L1-CDKAL1|1|fusion'] 101867 19930 SPLDMKDGFLA True PC9_epitope_Rep2 1192.579810284 1192.5787099358602 82.058 2 0.2268375607870602 0.00036105427849320016 0.9438714419765777 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 139685 10429 YTTDRVMTV True PC9_epitope_Rep2 1084.5222954078802 1084.52118993586 45.435 2 0.2268261653000946 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 66066 17382 LSNIFVIGK True PC9_epitope_Rep4 989.5909670210499 989.58986993586 74.861 2 0.22681090963350756 0.00036105427849320016 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 65785 10384 LSISETYDLK True H1975_Epitope_Rep1 1167.6023195503901 1167.6012299358601 44.891 2 0.22680002281496595 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 58386 6964 LEVNLQAM[Oxidation]K True H1975_Epitope_Rep1 1060.5586812970398 1060.55758993586 31.827 2 0.2267933951294626 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 131627 11062 VWAAVPGKTF True NCI_RA007_Epitope_Rep5 1074.58621599378 1074.5851099358601 49.185 2 0.226793115352123 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 27843 21300 FQLEHIMDL True PC9_epitope_Rep3 1144.5586809166 1144.55758993586 87.226 2 0.22678908338897596 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 38130 6866 HEQFKATLP True H1975_Epitope_Rep2 1069.55564414149 1069.5545499358602 31.329 2 0.22674851688091432 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 29378 13006 FVEPSRQFV True PC9_epitope_Rep4 1107.5712942056298 1107.57018993586 57.922 2 0.22674753372765494 0.00036105427849320016 0.9438714419765777 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 74074 13721 NHTVLPEAL True PC9_epitope_Rep2 992.5290950404799 992.52798993586 58.068 2 0.2267410246838684 0.00036105427849320016 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 42667 10013 IEVIEIM[Oxidation]TDR True H1975_Epitope_Rep1 1233.62748913285 1233.62638993586 43.451 2 0.22674077230514564 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 138405 12500 YRDPTTVTTL True PC9_epitope_Rep2 1165.59790287629 1165.5968099358602 53.391 2 0.2267178256278781 0.00036105427849320016 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 34739 4918 GQNPTNAEVLK True NCI_RA007_Epitope_Rep5 1169.6040508858898 1169.6029499358601 25.612 2 0.22671092434894688 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 70524 15962 LYTEKFEEF True PC9_epitope_Rep6 1204.5652057656796 1204.5641099358602 73.695 2 0.22670831290165855 0.00036105427849320016 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 71716 4599 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 22.812 2 0.22670427289060596 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 125478 10411 VLVDQTTGLSR True PC9_epitope_Rep2 1187.65100107831 1187.64990993586 45.368 2 0.2266949349369697 0.00036105427849320016 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 44901 8224 IQDNHDGTYTV True PC9_epitope_Rep1 1261.55749461629 1261.5563899358601 36.466 2 0.22668408092800685 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 104229 11334 SSDNIMVQY True H1975_Epitope_Rep1 1055.45936079815 1055.45826993586 48.575 2 0.22667541787441636 0.00036105427849320016 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 116954 15480 TYPIKTPTF True PC9_epitope_Rep4 1066.5698972233001 1066.5688099358601 67.471 2 0.22665877069292265 0.00036105427849320016 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 116582 13650 TYGEIFEKF True NCI_RA007_Epitope_Rep5 1132.54407639828 1132.54357496793 59.188 1 0.226652402768702 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 74758 20670 NLLQVLEKV True PC9_epitope_Rep4 1054.63864548946 1054.63754993586 87.665 2 0.22665235872984152 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 22964 17681 EVIEKFDYV True PC9_epitope_Rep5 1140.5702911461199 1140.56918993586 73.024 2 0.22664800945693117 0.00036105427849320016 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 97129 6742 SFETTDESLR True NCI_RA007_Epitope_Rep3 1183.5356965425499 1183.5345899358601 33.61 2 0.2266418579379665 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000484852.1_1_3:147884522-147885023:-|nuORF', 'ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 45485 15671 ISEQFTAM[Oxidation]FR True PC9_epitope_Rep1 1244.58595867404 1244.58486993586 65.1 2 0.22663851560574658 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 72328 9649 MTDDKITEV True PC9_epitope_Rep5 1050.49032657326 1050.48922993586 42.081 2 0.22663481423727558 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67'] 138844 4370 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 21.922 2 0.22662883591255803 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 107146 13330 SYMPTVSHL True PC9_epitope_Rep6 1033.49026700361 1033.4891699358602 62.931 2 0.22662550006494672 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 89005 7045 REDWKIIRA True H1975_Epitope_Rep3 1185.66184054553 1185.66019490379 32.064 3 0.22662179000697535 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1', 'ENST00000498520.1_1_2:206992517-206997685:-|nuORF'] 95619 8059 SATTSPFFK True NCI_RA007_Epitope_Rep3 984.4916469025999 984.49054993586 38.787 2 0.22662050888586602 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB'] 81780 5982 PSEKPSSTLQY True H1975_Epitope_Rep2 1235.60338217955 1235.6022899358602 27.989 2 0.2266175973790828 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L'] 24829 11667 FDAGELITQR True NCI_RA007_Epitope_Rep1 1148.5825871653199 1148.5814899358602 49.355 2 0.22660969708165452 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 129211 4602 VTDKSMVDKY True H1975_Epitope_Rep2 1184.5747249035599 1184.57362993586 22.806 2 0.22660807764996355 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 136110 15224 YGEPSEVFINR True PC9_epitope_Rep1 1309.6302656337298 1309.62916993586 63.379 2 0.22660715743805526 0.00036105427849320016 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 8727 12114 AVDPRFLAY True H1975_Epitope_Rep1 1050.5498304850598 1050.5487299358601 51.61 2 0.22659352386125847 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 83056 21616 PYLFHVVTF True PC9_epitope_Rep1 1121.59096702105 1121.5898699358602 87.972 2 0.2265873806093909 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 15242 4176 EAGEQGDIEPR True PC9_epitope_Rep4 1199.5418445521498 1199.54074993586 22.417 2 0.22658457562041176 0.00036105427849320016 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 125808 6962 VNLPINGNGKQ True NCI_RA007_Epitope_Rep4 1152.62512068364 1152.62402993586 33.405 2 0.22655580674002568 0.00036105427849320016 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 106179 9093 SVPEGPWWRK True NCI_RA007_Epitope_Rep4 1240.63529144452 1240.6336349037902 41.812 3 0.22654834011814087 0.00036105427849320016 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 54261 10972 KYPKVWEGF True NCI_RA007_Epitope_Rep4 1152.59678067748 1152.59568993586 49.071 2 0.22654486071169005 0.00036105427849320016 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 941 5071 ADTQTYQPYNK True NCI_RA007_Epitope_Rep2 1327.6044448087098 1327.60334993586 24.35 2 0.22653186509784207 0.00036105427849320016 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'DCAF5-ERH|1|fusion'] 9256 4817 AVQRTLLEK True NCI_RA007_Epitope_Rep2 1056.6291434349198 1056.6280499358602 23.362 2 0.22652967179455952 0.00036105427849320016 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 74147 9362 NHYNNIM[Oxidation]AL True PC9_epitope_Rep4 1104.50222905008 1104.50112993586 43.621 2 0.2265232486757586 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 25499 4606 FEQAGEPRQP True H1975_Epitope_Rep3 1157.5465360097699 1157.54542993586 22.839 2 0.22651793060452594 0.00036105427849320016 0.9438714419765777 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 86517 6526 QRAITGASL True PC9_epitope_Rep6 915.5137793295099 915.51268993586 33.775 2 0.22651071683415483 0.00036105427849320016 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 39362 8570 HLVDEPQNLIK True NCI_RA007_Epitope_Rep4 1304.7088503076 1304.7077499358602 39.749 2 0.22650830737373537 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 1909 10741 AEIMKTLEV True H1975_Epitope_Rep3 1032.5525329069999 1032.5514299358601 46.395 2 0.22650259533118924 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 37882 7381 HEAFLGREVA True H1975_Epitope_Rep2 1127.57235683479 1127.5712499358601 33.331 2 0.22649396811206035 0.00036105427849320016 0.9438714419765777 ['ENSG00000142552|ENST00000270645|RCN3', 'ENST00000593644.1_1_19:50031828-50040290:+|nuORF'] 61687 18360 LLIDDKGTIKL True PC9_epitope_Rep1 1227.74383883399 1227.74218490379 75.413 3 0.226492028370291 0.00036105427849320016 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 54111 11384 KYMEDYHQF True PC9_epitope_Rep1 1259.52810906431 1259.5270099358602 48.669 2 0.22646264971089522 0.00036105427849320016 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 128757 4798 VSQEPFPNK True NCI_RA007_Epitope_Rep3 1044.5240096600398 1044.52290993586 25.839 2 0.22645396928508554 0.00036105427849320016 0.9438714419765777 ['ENSG00000134986|ENST00000257435|NREP', 'ENST00000507742.5_1_5:111066620-111092910:-|nuORF', 'nc|ENSG00000134986|Q16612-2|NREP'] 77643 20391 NYYKVNWTF True PC9_epitope_Rep1 1233.5818588893296 1233.5807699358602 83.256 2 0.2264424436349451 0.00036105427849320016 0.9438714419765777 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 21033 11392 ERDAYVQAL True PC9_epitope_Rep2 1063.52982331647 1063.5287299358602 49.142 2 0.22644168745175597 0.00036105427849320016 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 119933 5749 VEYETYKEA True H1975_Epitope_Rep2 1130.5131701928199 1130.5120699358602 27.111 2 0.22642747747007108 0.00036105427849320016 0.9438714419765777 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 138295 19783 YQYPVIIHL True PC9_epitope_Rep4 1144.6280808057597 1144.6269899358601 84.222 2 0.2263786588077906 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 89658 9741 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 42.455 3 0.2263582362098775 0.00036105427849320016 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 71526 12429 MKTILSNQTVD True PC9_epitope_Rep1 1248.63838778928 1248.63728993586 52.671 2 0.22633470555593801 0.00036105427849320016 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000514842.5_1_4:39459094-39460113:-|nuORF'] 1354 5678 AEEEAATRIPA True H1975_Epitope_Rep3 1156.57241640444 1156.5713099358602 26.869 2 0.2263258969987939 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 54385 9968 KYQKGFSLW True NCI_RA007_Epitope_Rep3 1155.6076797143498 1155.60658993586 46.293 2 0.22632203620630567 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 2326 12193 AEQDFWRAV True H1975_Epitope_Rep3 1120.53015766964 1120.5290699358602 52.072 2 0.2263208170420484 0.00036105427849320016 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 12798 13448 DLINNLGTIAK True NCI_RA007_Epitope_Rep1 1170.66083748602 1170.6597499358602 56.313 2 0.22631332845318447 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 89485 7288 REQLVDVQA True H1975_Epitope_Rep2 1056.55637241748 1056.55526993586 32.971 2 0.2263114678882373 0.00036105427849320016 0.9438714419765777 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000488706.1_1_10:71007290-71008567:+|nuORF', 'nc|ENSG00000156510|Q2TB90-3|HKDC1'] 89186 4061 REIEEGQPEA True H1975_Epitope_Rep2 1156.53603089572 1156.5349299358602 20.707 2 0.22630879605240697 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'SCRIB|p.P592S|1|0.4|ENSG00000180900|chr8:143808950-143808950|G/A|missense_variant'] 139832 5697 YVDGVEVHN True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 28.528 2 0.2263058305805443 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 140726 15549 YYQHIVTTL True PC9_epitope_Rep1 1136.5866099166 1136.58550993586 64.634 2 0.2263039155276482 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 10077 6459 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep4 1119.5171508382302 1119.51604993586 31.443 2 0.22629326954855378 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 8064 8912 ATEDPWKTNY True H1975_Epitope_Rep2 1223.54586730343 1223.5447699358601 39.247 2 0.22629250823432928 0.00036105427849320016 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 77341 20653 NYLDQIAKF True PC9_epitope_Rep3 1110.5709598524597 1110.5698699358602 84.713 2 0.22628863306592562 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C'] 137047 19103 YKVEYPIMY True PC9_epitope_Rep2 1204.58383303528 1204.58272993586 78.851 2 0.22628487333064154 0.00036105427849320016 0.9438714419765777 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 42962 8530 IGAEVYHNLK True PC9_epitope_Rep3 1142.60840799034 1142.6067749037902 37.766 3 0.2262801710693783 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 48852 7220 KESEMNVIAA True H1975_Epitope_Rep2 1090.5328600915798 1090.5317699358602 32.705 2 0.2262791885282028 0.00036105427849320016 0.9438714419765777 ['ENSG00000148411|ENST00000277554|NACC2'] 14251 4179 DSYVGDEAQSK True NCI_RA007_Epitope_Rep4 1197.51496109797 1197.5138699358602 22.376 2 0.22626817306737043 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 70146 10505 LYLDEAHSI True NCI_RA007_Epitope_Rep5 1059.52367530687 1059.52256993586 47.04 2 0.22626270766964296 0.00036105427849320016 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'SPTLC2|p.A351S|1|0.2|ENSG00000100596|chr14:77555425-77555425|C/A|missense_variant'] 28856 7171 FTDPRTM[Oxidation]GY True H1975_Epitope_Rep1 1102.4753455958999 1102.4742499358601 32.604 2 0.22625443813739526 0.00036105427849320016 0.9438714419765777 ['ENSG00000140650|ENST00000268261|PMM2', 'ENST00000567697.1_1_16:8904837-8941679:+|nuORF'] 106949 9029 SYLDRTEQL True NCI_RA007_Epitope_Rep4 1123.55095268387 1123.54984993586 41.562 2 0.22623431472349564 0.00036105427849320016 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 39668 10820 HPTEDLVVSA True PC9_epitope_Rep1 1066.5294889632999 1066.52838993586 46.506 2 0.22622438050714053 0.00036105427849320016 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 132068 18421 VYIKDLSSF True PC9_epitope_Rep2 1070.56481184286 1070.56370993586 76.186 2 0.2262236149920124 0.00036105427849320016 0.9438714419765777 ['ENSG00000084731|ENST00000264712|KIF3C'] 54335 6401 KYQEVTNNL True NCI_RA007_Epitope_Rep4 1107.5560380643099 1107.5549499358601 31.223 2 0.2262211243258252 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 7113 6981 AQYEDIAQKS True PC9_epitope_Rep3 1151.5458673034298 1151.5447699358601 31.864 2 0.2262094370387117 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 7419 5781 ASATVAIPK True NCI_RA007_Epitope_Rep4 856.50181766348 856.50072993586 28.859 2 0.22620695027452722 0.00036105427849320016 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 132372 15739 VYMELSQKL True PC9_epitope_Rep2 1109.57908200801 1109.5779899358602 65.811 2 0.22620386603302836 0.00036105427849320016 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 135116 11819 YAPELLYYANK True H1975_Epitope_Rep1 1343.6761531969898 1343.6750499358602 50.457 2 0.2261987197520628 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 53587 11915 KVVDVDVKL True PC9_epitope_Rep2 1013.6120963884499 1013.61098993586 51.156 2 0.22619404128870643 0.00036105427849320016 0.9438714419765777 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 89730 9772 REYQELMSV True NCI_RA007_Epitope_Rep3 1153.54375912845 1153.5426699358602 45.504 2 0.2261929878341941 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 53763 12671 KYFDEHYEY True PC9_epitope_Rep5 1292.53496826656 1292.5338699358601 53.743 2 0.22619181633320143 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 77573 20124 NYSPYVNYF True PC9_epitope_Rep4 1165.50802524273 1165.5069299358602 85.542 2 0.22618098687948981 0.00036105427849320016 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 110091 19325 TIAEIKNLF True PC9_epitope_Rep4 1047.59644632431 1047.5953499358602 82.441 2 0.22618032076882766 0.00036105427849320016 0.9438714419765777 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000601652.5_1_19:14640444-14674077:+|nuORF'] 44094 12110 ILMEHIHKL True PC9_epitope_Rep3 1132.64268532408 1132.64104490379 51.625 3 0.22617491412983334 0.00036105427849320016 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 70061 16961 LYHDIFSRL True PC9_epitope_Rep4 1162.61349337078 1162.6118549037901 73.232 3 0.22616945543998604 0.00036105427849320016 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 107265 19167 SYPTFFPRF True PC9_epitope_Rep6 1160.5654805491997 1160.5643899358602 86.376 2 0.22616505955528668 0.00036105427849320016 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'ENST00000481663.1_1_3:148801501-148804285:-|nuORF'] 105406 18060 SVADYFKQI True PC9_epitope_Rep6 1069.54441075145 1069.5433099358602 82.098 2 0.22616272264040777 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 20987 13960 ERALQQYTL True PC9_epitope_Rep1 1120.5876725457601 1120.58656993586 58.533 2 0.22615480274094285 0.00036105427849320016 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 72274 14399 MSDSYLPSYY True H1975_Epitope_Rep2 1224.5008912569601 1224.49978993586 60.535 2 0.22615115726126941 0.00036105427849320016 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 97072 10811 SEYLRYEDTL True H1975_Epitope_Rep3 1287.59829679911 1287.5971899358601 46.663 2 0.2261498042800542 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 74152 16207 NHYNNIMAL True PC9_epitope_Rep3 1088.50731405008 1088.5062099358602 67.477 2 0.22614670626216313 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 69524 6047 LVSSDPEINTK True NCI_RA007_Epitope_Rep2 1201.6190322436898 1201.61792993586 28.126 2 0.22612537078698736 0.00036105427849320016 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF', 'ENST00000484772.1_1_1:27271823-27272075:+|nuORF'] 110639 7276 TIVEEVQDGK True NCI_RA007_Epitope_Rep1 1116.5662683948397 1116.56516993586 32.292 2 0.2261147168525536 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2'] 140229 18671 YWMHVQNTF True PC9_epitope_Rep2 1224.53861417836 1224.53750993586 77.185 2 0.22610664816723128 0.00036105427849320016 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 21305 14023 ERISLQQEL True PC9_epitope_Rep2 1114.59823722946 1114.5971499358602 59.218 2 0.22610605406136083 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 47778 10448 IYQRDPLKL True PC9_epitope_Rep4 1144.6604435631998 1144.65934993586 47.899 2 0.2260669288578234 0.00036105427849320016 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 40501 8034 HSEYHTLLY True H1975_Epitope_Rep2 1161.54547338061 1161.54436993586 35.853 2 0.2260639930603637 0.00036105427849320016 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5'] 132069 19146 VYIKDLSSF True PC9_epitope_Rep3 1070.56481184286 1070.56370993586 78.865 2 0.22604258719962383 0.00036105427849320016 0.9438714419765777 ['ENSG00000084731|ENST00000264712|KIF3C'] 135820 8748 YEQELKDLAA True H1975_Epitope_Rep1 1178.5819184589798 1178.58082993586 38.579 2 0.22603375270399054 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 9022 8813 AVIGADSVTLK True NCI_RA007_Epitope_Rep4 1072.61282466444 1072.61172993586 40.709 2 0.22601651147599383 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 26684 12302 FLDDFESKY True H1975_Epitope_Rep3 1162.51825557326 1162.51714993586 52.5 2 0.22601423557184205 0.00036105427849320016 0.9438714419765777 ['ENST00000494757.5_1_17:38375603-38434474:+|nuORF', 'ENSG00000171475|ENST00000323571|WIPF2', 'nc|ENSG00000171475|Q8TF74-2|WIPF2'] 37230 19794 GVVDPRAISVL True PC9_epitope_Rep5 1124.65535818276 1124.6542699358602 81.183 2 0.2260043080276027 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 138244 22031 YQTPRLWLF True PC9_epitope_Rep5 1222.6498788795 1222.6487899358601 89.769 2 0.22600253850895163 0.00036105427849320016 0.9438714419765777 ['ENST00000467275.1_1_3:112256557-112257010:-|nuORF', 'nc|ENSG00000144848|Q9NT62-2|ATG3', 'ENSG00000144848|ENST00000283290|ATG3', 'ENST00000495756.5_1_3:112255248-112280627:-|nuORF'] 30197 20670 FYVPAEPKLAF True PC9_epitope_Rep2 1280.68051030144 1280.6794099358601 84.944 2 0.22596034572836216 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 53566 6022 KVTEGSFVYK True NCI_RA007_Epitope_Rep1 1156.61282466444 1156.61116490379 27.466 3 0.22592970925019384 0.00036105427849320016 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 93981 11085 RVPELLHRL True PC9_epitope_Rep2 1131.68766137055 1131.68602490379 47.962 3 0.225923215662465 0.00036105427849320016 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 138887 7697 YSDSLVQKGY True H1975_Epitope_Rep2 1158.5557037111398 1158.55460993586 34.561 2 0.22591608995273474 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 45008 20583 IQLPSEKAIFL True PC9_epitope_Rep2 1257.7332741502898 1257.7321699358602 84.605 2 0.22591368040526558 0.00036105427849320016 0.9438714419765777 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 35391 9836 GTDDGRLLEY True H1975_Epitope_Rep2 1137.5302172392899 1137.52912993586 42.82 2 0.2259116157492895 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 131804 10998 VYANGIRNI True PC9_epitope_Rep5 1018.5559784946599 1018.55488993586 47.292 2 0.22589750999728225 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 108312 12577 TEDGDSFLHLA True H1975_Epitope_Rep1 1203.54078192299 1203.53968993586 53.424 2 0.2258958135058646 0.00036105427849320016 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'NFKBIA|p.L131Wfs*33|1|0.1|ENSG00000100906|chr14:35403306-35403306|G/-|frameshift_variant', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 11297 11182 DETEFYLGK True NCI_RA007_Epitope_Rep1 1100.50260550912 1100.5015099358602 47.495 2 0.22588913197304508 0.00036105427849320016 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 16920 6561 EGDLIAAQAR True NCI_RA007_Epitope_Rep2 1042.54072235334 1042.5396299358601 30.133 2 0.22588654390227325 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 132642 13104 VYQHLFTRI True PC9_epitope_Rep2 1175.6451278522297 1175.64349490379 55.681 3 0.22588567704943946 0.00036105427849320016 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 772 7561 AAYEAELGDAR True NCI_RA007_Epitope_Rep1 1164.54111627616 1164.54000993586 33.402 2 0.22588281227314017 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 67202 9258 LTDITKGVQY True H1975_Epitope_Rep1 1136.607739284 1136.60664993586 40.522 2 0.2258775106003433 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 138741 6397 YSAPQHDYY True H1975_Epitope_Rep1 1142.46688870674 1142.4657899358601 29.665 2 0.22587290249844635 0.00036105427849320016 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 87751 20564 QVFPGLLERV True PC9_epitope_Rep3 1156.6604435631998 1156.65934993586 84.365 2 0.22587237592641088 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 104991 8793 STIEYVIQR True NCI_RA007_Epitope_Rep5 1107.59242357303 1107.5913299358601 40.488 2 0.22585550936636462 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 131748 17988 VYAALQRQLL True PC9_epitope_Rep3 1173.6869926642098 1173.6858899358601 74.395 2 0.2258247669491614 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 114419 18846 TSDTQWGWFY True H1975_Epitope_Rep1 1289.53530261973 1289.5342099358602 78.589 2 0.22581483498745192 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'nc|ENSG00000111224|Q9NR21-5|PARP11'] 76119 14541 NRPNLYYEV True PC9_epitope_Rep1 1166.57202248162 1166.57092993586 60.756 2 0.22579853613694012 0.00036105427849320016 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 27714 20888 FQDPVPLTV True PC9_epitope_Rep2 1014.5385970950199 1014.53807496793 85.789 1 0.2257930838684841 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 116548 16201 TYFDKNYNL True PC9_epitope_Rep5 1176.5451390274397 1176.5440499358601 67.308 2 0.22579183671650319 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 57418 8102 LEIIGNSKNVA True H1975_Epitope_Rep1 1156.64518742188 1156.6440899358602 36.111 2 0.22579008708432127 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 35700 8242 GTQSFVFQR True NCI_RA007_Epitope_Rep3 1068.5352430500798 1068.5341499358601 39.553 2 0.2257799176489456 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF'] 113874 11769 TRFEVQSAV True PC9_epitope_Rep5 1035.5349086969097 1035.53380993586 50.267 2 0.22575593020758566 0.00036105427849320016 0.9438714419765777 ['ENSG00000166016|ENST00000435224|ABTB2'] 76893 5996 NVKVDPEIQ True NCI_RA007_Epitope_Rep3 1040.5502244078798 1040.54912993586 30.563 2 0.22575028318956852 0.00036105427849320016 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.L163P|1|0.23|ENSG00000172867|chr12:52651655-52651655|A/G|missense_variant'] 12298 7753 DISTNYYASQK True NCI_RA007_Epitope_Rep1 1288.59354577184 1288.59244993586 34.149 2 0.22574660005206765 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1'] 49347 20590 KIFDEILVNA True PC9_epitope_Rep1 1160.64412479272 1160.64302993586 84.014 2 0.2257450350000898 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 54513 17883 LAAEFLKQV True PC9_epitope_Rep5 1017.5858816406097 1017.58478993586 73.804 2 0.22574477983516172 0.00036105427849320016 0.9438714419765777 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000406551.2_1_6:150201187-150201547:+|nuORF'] 25496 4631 FEQAGEPRQP True H1975_Epitope_Rep2 1157.5465360097699 1157.54542993586 22.913 2 0.2257352164838961 0.00036105427849320016 0.9438714419765777 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 14327 17217 DTDIVDEAIYY True H1975_Epitope_Rep2 1315.58197802863 1315.5808899358601 71.515 2 0.22571218717910535 0.00036105427849320016 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 19982 11033 EMEEKYYRF True PC9_epitope_Rep4 1293.5699738762899 1293.56833490379 50.215 3 0.22571024357610947 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 68666 16274 LVAVELEKV True PC9_epitope_Rep5 998.6011973515799 998.60010993586 67.591 2 0.22570937623323412 0.00036105427849320016 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 87678 10433 QVDEDALTY True H1975_Epitope_Rep3 1052.4662200004 1052.4651299358602 45.19 2 0.22569940669393657 0.00036105427849320016 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'GBE1-ZNF385D|1|fusion'] 104909 12072 STFQQMWISK True NCI_RA007_Epitope_Rep5 1254.60669373818 1254.60558993586 53.092 2 0.22569330791520115 0.00036105427849320016 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 89839 20816 RFLDDLGLKF True PC9_epitope_Rep2 1222.6710082468996 1222.66990993586 85.511 2 0.22569111114843643 0.00036105427849320016 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 14686 8036 DVNQQEFVR True PC9_epitope_Rep6 1133.5465360097699 1133.54542993586 40.396 2 0.22568760073435573 0.00036105427849320016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 139688 11450 YTTDRVMTV True PC9_epitope_Rep3 1084.5222954078802 1084.52118993586 49.04 2 0.2256852149784378 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 90908 14587 RLDTPLYFSY True H1975_Epitope_Rep2 1273.6342883850098 1273.6331899358602 61.265 2 0.22567685907291213 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'P3H1|p.F627Lfs*4|1|0.68|ENSG00000117385|chr1:42747755-42747756|AA/-|frameshift_variant', 'ENST00000460031.5_1_1:43212370-43220777:-|nuORF', 'ENST00000481465.3_1_1:43215737-43220567:-|nuORF'] 76500 7995 NTDHQTQLLY True H1975_Epitope_Rep3 1231.5833154413099 1231.5822099358602 35.723 2 0.22567618804207148 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 47732 11923 IYQKAFEHL True PC9_epitope_Rep1 1147.6025943339098 1147.60093490379 50.727 3 0.22566016192118915 0.00036105427849320016 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 129283 4742 VTDRDIDRY True H1975_Epitope_Rep3 1151.55710069347 1151.5560099358602 23.366 2 0.22563936764825027 0.00036105427849320016 0.9438714419765777 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 29202 7132 FVAVTGAEEDR True NCI_RA007_Epitope_Rep2 1192.5724164044398 1192.5713099358602 32.364 2 0.225636693097635 0.00036105427849320016 0.9438714419765777 ['ENSG00000088833|ENST00000216879|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-5|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-4|NSFL1C', 'ENST00000478168.1_1_20:1444972-1447445:-|nuORF', 'ENST00000487086.1_1_20:1438843-1447469:-|nuORF'] 94796 11096 RYLQTLTTI True NCI_RA007_Epitope_Rep5 1107.62880908175 1107.6277099358601 49.317 2 0.2256357108616094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 87384 13926 QTDNIIYVY True H1975_Epitope_Rep1 1127.5498900547097 1127.5487899358602 58.72 2 0.22563311132192207 0.00036105427849320016 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF', 'IFT172|p.K94N|1|0.12|ENSG00000138002|chr2:27485032-27485032|C/G|missense_variant'] 87401 11292 QTDPVTLQY True H1975_Epitope_Rep3 1063.51858992643 1063.51748993586 48.54 2 0.22562319864227373 0.00036105427849320016 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 47220 19857 IYDKFIAQL True PC9_epitope_Rep2 1109.6120963884498 1109.61098993586 81.771 2 0.2256152310034786 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 9782 14293 AYLESFYKF True NCI_RA007_Epitope_Rep3 1166.5648118428599 1166.56370993586 63.543 2 0.22560822388607787 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 8277 5026 ATITKVLQK True NCI_RA007_Epitope_Rep4 1000.6280808057599 1000.62698993586 25.82 2 0.2255977918384824 0.00036105427849320016 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 23928 15585 EYNNNFHVL True PC9_epitope_Rep1 1148.5250722892001 1148.5239699358601 64.77 2 0.225591489345667 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 92363 8123 RQPYAVSEL True NCI_RA007_Epitope_Rep3 1061.5505587610498 1061.54946993586 39.057 2 0.2255904126234111 0.00036105427849320016 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 23842 23123 EYLPIGGLAEF True PC9_epitope_Rep5 1207.6124903112698 1207.6113899358602 93.93 2 0.2255829233487472 0.00036105427849320016 0.9438714419765777 ['CNOT1-GOT2|1|fusion', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2'] 124263 17899 VLDDKLYVV True PC9_epitope_Rep2 1062.5961119711399 1062.5950099358602 74.152 2 0.22557369762835014 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 14238 7333 DSYSSSRSDLY True H1975_Epitope_Rep2 1278.5364248185401 1278.53532993586 33.147 2 0.2255730933662293 0.00036105427849320016 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 4566 8709 ALAAAGYDVEK True PC9_epitope_Rep4 1106.56078909158 1106.5596899358602 40.996 2 0.2255727705698372 0.00036105427849320016 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6'] 125900 4576 VNTLIRPDGEK True NCI_RA007_Epitope_Rep5 1240.6775501793197 1240.67590490379 24.261 3 0.22555701469986023 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF'] 30022 19083 FYHKYFNYL True PC9_epitope_Rep5 1293.61824439805 1293.6166049037902 78.432 3 0.22555551756078954 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 138787 16876 YSDEFGNLDF True H1975_Epitope_Rep2 1205.4876837209702 1205.4865899358601 70.159 2 0.22555116074254794 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 116883 11342 TYNSSGAYRF True PC9_epitope_Rep5 1164.5199869087598 1164.5188899358602 48.623 2 0.2255505893527854 0.00036105427849320016 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 98107 18467 SIAGIFKEV True PC9_epitope_Rep4 962.54368247546 962.54258993586 79.103 2 0.22554728854742903 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 76491 10779 NTDFYQTSY True H1975_Epitope_Rep3 1137.46146897313 1137.4603699358602 46.541 2 0.22554648199002722 0.00036105427849320016 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 47234 19854 IYDSVKVYF True PC9_epitope_Rep1 1132.5804619069997 1132.57936993586 81.184 2 0.22553690445721597 0.00036105427849320016 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 44096 8969 ILMEHIHKL True PC9_epitope_Rep4 1132.64268532408 1132.64104490379 42.05 3 0.2255358575214867 0.00036105427849320016 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 4766 6699 ALEEPDDQNRI True NCI_RA007_Epitope_Rep3 1298.6102584651396 1298.60916993586 33.433 2 0.22552283857182956 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072694|P31994-5|FCGR2B', 'nc|ENSG00000072694|P31994-2|FCGR2B', 'nc|ENSG00000072694|P31994-3|FCGR2B', 'nc|ENSG00000072694|P31994-4|FCGR2B', 'ENSG00000072694|ENST00000358671|FCGR2B', 'ENST00000480308.5_1_1:161647083-161647340:+|nuORF'] 25525 7959 FEQEYTRVC True H1975_Epitope_Rep1 1173.5124590001699 1173.51136993586 35.563 2 0.2255185749339137 0.00036105427849320016 0.9438714419765777 ['ENSG00000126773|ENST00000406854|PCNX4', 'ENST00000483571.5_1_14:60582139-60592559:+|nuORF'] 7096 6468 AQYEDIANR True PC9_epitope_Rep2 1078.5043368446197 1078.5032299358602 30.293 2 0.22550703928564156 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 76334 7844 NSELLNDRY True H1975_Epitope_Rep2 1122.53055159246 1122.5294499358602 35.121 2 0.22550196581932147 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14'] 94975 15041 RYQDAIRVF True PC9_epitope_Rep1 1166.6196413803798 1166.61799490379 62.674 3 0.22549801377124243 0.00036105427849320016 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 84579 15590 QHDFTSQIF True PC9_epitope_Rep6 1121.51417325233 1121.5130699358601 72.176 2 0.22548358280361921 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 84697 18653 QHFDTIYSI True PC9_epitope_Rep1 1122.53457434374 1122.53346993586 76.537 2 0.22547448238217813 0.00036105427849320016 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 106877 20411 SYIEHIFEI True PC9_epitope_Rep4 1149.57062549929 1149.5695299358601 86.657 2 0.2254559529266229 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 40114 9311 HRDIYVSTV True PC9_epitope_Rep5 1088.5614577979202 1088.56036993586 40.767 2 0.22545187188425883 0.00036105427849320016 0.9438714419765777 ['ENSG00000132017|ENST00000254337|DCAF15'] 25834 19603 FGFEITHEV True PC9_epitope_Rep3 1077.51311062317 1077.51200993586 80.64 2 0.2254217214617971 0.00036105427849320016 0.9438714419765777 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 12589 12499 DLDSRVLYY True H1975_Epitope_Rep1 1142.5607890915799 1142.5596899358602 53.118 2 0.22542038320906943 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 53897 13913 KYIENLDNITF True NCI_RA007_Epitope_Rep4 1368.6925315371197 1368.69142993586 60.791 2 0.22541815757504619 0.00036105427849320016 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 117910 13538 VAQLEQVYIR True PC9_epitope_Rep4 1217.6768219033297 1217.67572993586 59.97 2 0.22541757037886942 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 77318 14984 NYKKFYEQF True PC9_epitope_Rep3 1265.6080736371698 1265.6069699358602 62.764 2 0.22541361991312164 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 27640 22316 FQAEIAQLMSL True PC9_epitope_Rep4 1249.63765951329 1249.63656993586 94.078 2 0.22540517178626238 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 119083 5447 VEHSDLSFSK True NCI_RA007_Epitope_Rep1 1147.5509526838698 1147.54930490379 25.26 3 0.22539292548953982 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 8544 4862 ATYSVGMQK True NCI_RA007_Epitope_Rep3 983.4746169394699 983.47350993586 26.11 2 0.2253923078363292 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'nc|ENSG00000258628|A8MT19|RHPN2P1', 'ENST00000592247.1_1_19:33470904-33481620:-|nuORF'] 54422 14283 KYSPFVVSF True NCI_RA007_Epitope_Rep5 1072.5593325396 1072.55822993586 61.633 2 0.22536923338656928 0.00036105427849320016 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 26679 11497 FLDASGAKLDY True H1975_Epitope_Rep2 1198.5870038394198 1198.5859099358602 49.281 2 0.2253622176491841 0.00036105427849320016 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 135574 6842 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 31.275 2 0.2253546786806226 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 89722 9947 REYQELMNV True NCI_RA007_Epitope_Rep4 1180.55465816532 1180.5535699358602 45.106 2 0.2253531602401427 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 36480 8068 GVIVHIIEK True NCI_RA007_Epitope_Rep4 1006.61751612206 1006.61640993586 37.811 2 0.22534234029879657 0.00036105427849320016 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 77111 18529 NYAQVLDKF True PC9_epitope_Rep2 1096.5553097883198 1096.5542099358602 76.62 2 0.22533979996232045 0.00036105427849320016 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 112593 12829 TPAQFDADELR True PC9_epitope_Rep2 1261.5938801250097 1261.59278993586 54.649 2 0.22532841333486472 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 140738 12394 YYQNYFEKL True NCI_RA007_Epitope_Rep4 1266.5920892198599 1266.59098993586 54.669 2 0.22532569143495526 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 43669 21516 IIMLEALERV True PC9_epitope_Rep5 1185.67913040245 1185.6780299358602 87.797 2 0.22532516290672652 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 23838 23188 EYLPIGGLAEF True PC9_epitope_Rep1 1207.6124903112698 1207.6113899358602 93.987 2 0.22531085228214184 0.00036105427849320016 0.9438714419765777 ['CNOT1-GOT2|1|fusion', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2'] 25149 12525 FDQLLAEEK True PC9_epitope_Rep1 1091.5498900547097 1091.5487899358602 53.047 2 0.22528021670512016 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 133194 4540 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 22.572 2 0.2252710982816237 0.00036105427849320016 0.9438714419765777 ['AluSp_dup17171|chr6:42956085-42956345:+|4.405465577973595|0.2092895351215914|4.4|502.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.0483672628645049|0.0949023208327711|3.47|501.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 123619 9025 VILEGELER True H1975_Epitope_Rep1 1056.5815245361598 1056.5804299358601 39.621 2 0.22526752458391436 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'TPM2|p.E180K|1|0.36|ENSG00000198467|chr9:35685294-35685294|C/T|missense_variant', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 65322 15516 LSELEAALQR True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 64.692 2 0.2252666648443856 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 2273 18679 AEPLEIILHLP True H1975_Epitope_Rep1 1243.71762408615 1243.71652993586 77.896 2 0.2252607060596163 0.00036105427849320016 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 65313 10149 LSELEAALQR True H1975_Epitope_Rep3 1128.6138872935999 1128.61278993586 44.083 2 0.2252540448603033 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 26580 5800 FKDLGEEHFK True NCI_RA007_Epitope_Rep4 1248.6138872935996 1248.61225490379 28.935 3 0.22524762068619475 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 94714 13938 RYLEQLHQL True PC9_epitope_Rep1 1198.64585612822 1198.64422490379 58.448 3 0.22523752147614487 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 93955 12066 RVLQALEGLK True PC9_epitope_Rep4 1125.6869926642098 1125.6858899358601 54.219 2 0.2252353511120514 0.00036105427849320016 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 97620 19257 SHAINVLVL True PC9_epitope_Rep5 964.57056592964 964.56946993586 79.113 2 0.22522743746335183 0.00036105427849320016 0.9438714419765777 ['ENST00000274242.9_2_5:40832528-40832603:-|nuORF'] 70279 18196 LYPDHFHLL True PC9_epitope_Rep2 1153.59202965021 1153.5903749037902 75.297 3 0.225211821976369 0.00036105427849320016 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 106263 10135 SVQGIILYR True NCI_RA007_Epitope_Rep4 1047.6076797143498 1047.60658993586 45.842 2 0.22518983803491913 0.00036105427849320016 0.9438714419765777 ['SLC25A4|p.I186L|1|0.58|ENSG00000151729|chr4:185145208-185145208|A/C|missense_variant'] 85725 6088 QLSSGVSEIR True NCI_RA007_Epitope_Rep5 1074.56693710118 1074.5658499358601 30.098 2 0.2251824314024215 0.00036105427849320016 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 39527 19845 HPFDLGLYNEA True PC9_epitope_Rep5 1274.59315184902 1274.5920499358601 81.381 2 0.2251770393912868 0.00036105427849320016 0.9438714419765777 ['ENSG00000106399|ENST00000223129|RPA3'] 23945 11562 EYNSDLHQF True PC9_epitope_Rep2 1151.4883524273098 1151.48724993586 49.798 2 0.22517401116606484 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 72292 4307 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 21.678 2 0.22516953453782904 0.00036105427849320016 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 70376 21661 LYQDKFPFF True PC9_epitope_Rep5 1203.5964463243097 1203.5953499358602 88.366 2 0.22516117660614585 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 48444 6811 KEEELQAALAR True NCI_RA007_Epitope_Rep1 1256.67246479888 1256.6713699358602 30.501 2 0.22516010563527486 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'MYH11|p.K1088del|1|0.12|ENSG00000133392|chr16:15737478-15737480|CTT/-|inframe_deletion', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 94134 15427 RWFQPAIPSW True NCI_RA007_Epitope_Rep3 1286.6560268890996 1286.65492993586 68.237 2 0.22515517467827828 0.00036105427849320016 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 61195 9752 LLDPAQKNLY True H1975_Epitope_Rep2 1173.63937376545 1173.63826993586 42.499 2 0.22515170036570722 0.00036105427849320016 0.9438714419765777 ['ENST00000593242.7_1_19:9488987-9489811:+|nuORF', 'ENST00000605093.5_1_19:9488987-9490339:+|nuORF', 'nc|ENSG00000188629|Q13360-3|ZNF177', 'ENSG00000270011|ENST00000541595|ZNF559-ZNF177', 'ENSG00000188629|ENST00000683217|ZNF177'] 2487 6761 AEQPTRYETL True H1975_Epitope_Rep2 1206.5880664685799 1206.58696993586 30.921 2 0.2251453240570226 0.00036105427849320016 0.9438714419765777 ['ENSG00000085491|ENST00000565488|SLC25A24'] 22329 11113 ETEGPHVLLY True H1975_Epitope_Rep2 1156.5764391557198 1156.57534993586 47.781 2 0.2251281757233546 0.00036105427849320016 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'ENST00000485263.5_1_6:31998272-32000090:+|nuORF', 'ENST00000468936.5_1_6:31999682-32002424:+|nuORF', 'CON__P01030'] 8065 8770 ATEDPWKTNY True H1975_Epitope_Rep3 1223.54586730343 1223.5447699358601 38.74 2 0.22512203825695662 0.00036105427849320016 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 53502 17795 KVLNELTQL True PC9_epitope_Rep3 1056.6179100448799 1056.6168099358601 73.648 2 0.2251099904827575 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 138958 11456 YSELGHPFGY True H1975_Epitope_Rep3 1168.5189242795998 1168.5178299358602 49.185 2 0.2251001696901127 0.00036105427849320016 0.9438714419765777 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6', 'ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 116819 19298 TYLVDMQRF True PC9_epitope_Rep2 1171.5695799534699 1171.56848993586 79.605 2 0.2250853532726827 0.00036105427849320016 0.9438714419765777 ['ENSG00000180340|ENST00000315323|FZD2'] 53590 5144 KVVDVIGTK True NCI_RA007_Epitope_Rep4 957.58588164061 957.58478993586 26.31 2 0.22508418184192056 0.00036105427849320016 0.9438714419765777 ['ENSG00000005249|ENST00000265717|PRKAR2B'] 21852 10364 ESEDPDYYQY True H1975_Epitope_Rep3 1307.48299226335 1307.4818899358602 44.919 2 0.22508381799528943 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 17403 7124 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.5352099358602 32.212 2 0.22506254405254658 0.00036105427849320016 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 67204 9360 LTDITKGVQY True H1975_Epitope_Rep2 1136.607739284 1136.60664993586 40.965 2 0.22506199006939834 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 68664 16462 LVAVELEKV True PC9_epitope_Rep3 998.6011973515799 998.60010993586 68.458 2 0.2250590819421553 0.00036105427849320016 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 89745 6175 REYQVKLQA True NCI_RA007_Epitope_Rep1 1133.61930702721 1133.61766490379 28.056 3 0.22504155618038701 0.00036105427849320016 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 21295 17216 ERIQDYDVSL True PC9_epitope_Rep5 1236.5986311522797 1236.5975299358602 71.242 2 0.22502769937619888 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 104120 19857 SRYLNEFEEL True PC9_epitope_Rep5 1298.61428121642 1298.6131899358602 81.429 2 0.2250059893623037 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 9142 12526 AVLYQPLFDK True NCI_RA007_Epitope_Rep4 1192.6492101731599 1192.64810993586 55.198 2 0.2249841094941063 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 17880 9335 EIDGGLETLR True H1975_Epitope_Rep3 1101.56660274801 1101.56550993586 40.905 2 0.22498093044787176 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105379|P38117-2|ETFB', 'ENSG00000105379|ENST00000309244|ETFB', 'ENST00000594361.1_1_19:51849976-51850294:-|nuORF'] 113762 7834 TRDPQFQKL True PC9_epitope_Rep3 1131.6036569630699 1131.6020249037902 35.123 3 0.2249675044570545 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 137105 10473 YLDDPDLKY True H1975_Epitope_Rep3 1140.5339056374 1140.53280993586 45.347 2 0.22496303520042285 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 83240 11828 QADIARMLY True H1975_Epitope_Rep2 1079.54336520563 1079.54226993586 50.574 2 0.2249581142805458 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 49127 4619 KGGEIQPVSVK True NCI_RA007_Epitope_Rep2 1140.65027280232 1140.64916993586 22.592 2 0.224941168855654 0.00036105427849320016 0.9438714419765777 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF'] 9261 4504 AVQRTLLEK True NCI_RA007_Epitope_Rep4 1056.6291434349198 1056.6280499358602 23.715 2 0.2249378702512178 0.00036105427849320016 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 102893 11175 SQIDPSSIERA True PC9_epitope_Rep2 1201.5938801250102 1201.59278993586 48.312 2 0.22491930703548488 0.00036105427849320016 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 93547 5775 RSQLVLVTK True NCI_RA007_Epitope_Rep4 1042.6498788795 1042.6487899358601 28.834 2 0.22491498260122475 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138496|Q8IXQ6-3|PARP9', 'ENSG00000138496|ENST00000682323|PARP9', 'nc|ENSG00000138496|Q8IXQ6|PARP9'] 114868 10488 TTDPYLTNSY True H1975_Epitope_Rep1 1173.5189838492502 1173.51847496793 45.298 1 0.22491298459971265 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 17613 7595 EHNDLQYAA True PC9_epitope_Rep1 1059.46213767947 1059.46104993586 34.036 2 0.2248994707984426 0.00036105427849320016 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 64306 21410 LQMEPAAFQAL True PC9_epitope_Rep2 1217.61144476545 1217.61034993586 87.825 2 0.22489606724540956 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 132072 7733 VYIKHPVSL True NCI_RA007_Epitope_Rep2 1054.61751612206 1054.61640993586 34.706 2 0.2248939340009019 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 17553 15459 EHIQNIMTL True PC9_epitope_Rep6 1097.55392988933 1097.55282993586 71.621 2 0.2248840675284176 0.00036105427849320016 0.9438714419765777 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 53943 7642 KYISKPENL True PC9_epitope_Rep5 1090.60225998074 1090.60116993586 34.341 2 0.2248828120928218 0.00036105427849320016 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 76507 11690 NTDIAENLY True H1975_Epitope_Rep3 1051.48220441771 1051.4816749679298 50.105 1 0.22486996365945722 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 24752 16931 FAYDGKDYL True PC9_epitope_Rep5 1090.4971262058598 1090.4960299358602 70.141 2 0.2248664787911169 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 43898 14602 ILDNADVLSQY True H1975_Epitope_Rep2 1249.61903224369 1249.61792993586 61.325 2 0.22486281693151908 0.00036105427849320016 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 85361 8284 QLDSPQRALY True H1975_Epitope_Rep2 1189.6091362663299 1189.60802993586 36.815 2 0.22486129979509042 0.00036105427849320016 0.9438714419765777 ['ENST00000476678.1_1_22:20754858-20755110:+|nuORF', 'nc|ENSG00000185252|Q16587-3|ZNF74', 'ENSG00000185252|ENST00000400451|ZNF74', 'ENST00000403682.7_1_22:20748811-20761255:+|nuORF'] 93841 19697 RVFIGNLNTL True PC9_epitope_Rep1 1145.65569253593 1145.65458993586 80.59 2 0.22484102861578456 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 139283 5217 YTDHQNSSSYY True H1975_Epitope_Rep3 1363.5316737912701 1363.53117496793 25.153 1 0.2248408497254241 0.00036105427849320016 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 94609 14518 RYKLYQEMF True PC9_epitope_Rep6 1276.6274291827597 1276.6263299358602 67.729 2 0.22482671474347038 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 23577 19678 EYDLIVHQL True PC9_epitope_Rep5 1128.58152453616 1128.5804299358601 80.745 2 0.22481384372222926 0.00036105427849320016 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 93839 7115 RVFDVPIRR True NCI_RA007_Epitope_Rep4 1156.68291034328 1156.68127490379 33.989 3 0.2248094773572745 0.00036105427849320016 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3'] 38616 9578 HHIVSIEV True PC9_epitope_Rep4 932.50796567308 932.50686993586 44.463 2 0.22480722644291495 0.00036105427849320016 0.9438714419765777 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 70283 17449 LYPDHFHLL True PC9_epitope_Rep4 1153.59202965021 1153.5903749037902 75.114 3 0.22480323583757358 0.00036105427849320016 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 12139 11373 DIISDTSGDFR True H1975_Epitope_Rep1 1224.5622456435601 1224.5611499358602 48.725 2 0.22479410030102542 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 87425 13903 QTEEDYTLTMY True H1975_Epitope_Rep1 1392.5755127492 1392.57440993586 58.63 2 0.2247918767374313 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166206|P28472-3|GABRB3'] 54251 19477 KYPENFFLL True PC9_epitope_Rep6 1169.61209638845 1169.61098993586 87.581 2 0.22478386392740332 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 86512 8558 QRAITGASL True PC9_epitope_Rep3 915.5137793295099 915.51268993586 37.871 2 0.22477298782075078 0.00036105427849320016 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 131934 16417 VYEYVVERF True PC9_epitope_Rep6 1202.5971746002995 1202.5960699358602 75.552 2 0.22477237579471573 0.00036105427849320016 0.9438714419765777 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 82990 16407 PYFNAPVYL True NCI_RA007_Epitope_Rep3 1082.5436824754597 1082.5425899358602 72.272 2 0.22476578492551158 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 69523 5522 LVSSDPEINTK True H1975_Epitope_Rep3 1201.6190322436898 1201.61792993586 26.288 2 0.22476184235646607 0.00036105427849320016 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF', 'ENST00000484772.1_1_1:27271823-27272075:+|nuORF'] 5328 13906 ALSKEGIVAL True PC9_epitope_Rep4 999.5964463243098 999.59534993586 61.393 2 0.22475731647274114 0.00036105427849320016 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 22237 6189 ETDNM[Oxidation]FNRY True H1975_Epitope_Rep3 1204.48188752832 1204.48078993586 28.818 2 0.22475146830687825 0.00036105427849320016 0.9438714419765777 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF'] 125459 9118 VLTVINQTQK True PC9_epitope_Rep3 1142.66592286646 1142.66482993586 40.01 2 0.22474980933107372 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 96952 10292 SEVEVIHVP True H1975_Epitope_Rep2 1007.52876068731 1007.52766993586 44.594 2 0.22474746422187916 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 116535 21414 TYEKFFGLL True PC9_epitope_Rep2 1116.5855472874398 1116.5844499358602 87.84 2 0.2247390096814115 0.00036105427849320016 0.9438714419765777 ['ENSG00000163510|ENST00000410053|CWC22'] 110194 15997 TIDQLYLEY True H1975_Epitope_Rep2 1156.5652057656798 1156.56467496793 66.732 1 0.22473769231473978 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 44945 7282 IQEVADELQK True NCI_RA007_Epitope_Rep2 1171.6084675599898 1171.60736993586 32.946 2 0.22473064628550157 0.00036105427849320016 0.9438714419765777 ['ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 68665 15054 LVAVELEKV True PC9_epitope_Rep4 998.6011973515799 998.60010993586 65.837 2 0.22472942990857347 0.00036105427849320016 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 40614 17786 HTDWLLDLY True H1975_Epitope_Rep2 1174.56587447202 1174.56476993586 73.735 2 0.22472906964029807 0.00036105427849320016 0.9438714419765777 ['ENSG00000133302|ENST00000265140|SLF1'] 1479 6162 AEEMETGNVA True H1975_Epitope_Rep2 1049.4335399731299 1049.4324499358602 28.674 2 0.22472843972430248 0.00036105427849320016 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 102037 5897 SPPPPPPPP True NCI_RA007_Epitope_Rep3 881.4647038787699 881.46360993586 30.171 2 0.22472115846413632 0.00036105427849320016 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 136242 15004 YGQISEVVVVK True PC9_epitope_Rep1 1219.68123857743 1219.68014993586 62.533 2 0.22471392697878886 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 46247 8529 ITDSAGHILYS True H1975_Epitope_Rep3 1175.58225281215 1175.5811499358601 37.792 2 0.22470992960536706 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 138902 15628 YSDVSGLLANY True H1975_Epitope_Rep2 1200.5662683948399 1200.56516993586 65.267 2 0.2247070195335554 0.00036105427849320016 0.9438714419765777 ['ENSG00000153391|ENST00000334598|INO80C', 'nc|ENSG00000153391|Q6PI98-4|INO80C'] 86741 20336 QRLETILSL True PC9_epitope_Rep1 1071.62880908175 1071.6277099358601 83.053 2 0.2246912853663428 0.00036105427849320016 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 44583 19387 IPFWRNTAV True PC9_epitope_Rep5 1102.59236400338 1102.59126993586 79.618 2 0.22468459699762391 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3'] 89172 10474 REIDDYIVQA True H1975_Epitope_Rep1 1220.6037165327198 1220.60260993586 45.243 2 0.2246845603225263 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 92087 12543 RPTEVLAGTQL True PC9_epitope_Rep4 1183.6560864587498 1183.6549899358602 56.066 2 0.224674450326818 0.00036105427849320016 0.9438714419765777 ['ENSG00000101255|ENST00000217233|TRIB3'] 113510 11299 TQTAVITRI True PC9_epitope_Rep1 1001.5869442697699 1001.58584993586 48.341 2 0.22466532933460764 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 71552 5819 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 27.455 2 0.22466289025565447 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 87352 5902 QTDERLAQY True H1975_Epitope_Rep3 1122.53055159246 1122.5294499358602 27.712 2 0.22465220790269697 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 2338 4457 AEQDPDELNKA True H1975_Epitope_Rep3 1228.55716026312 1228.55606993586 22.266 2 0.22464595809987592 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 1589 16859 AEFLKVFLP True H1975_Epitope_Rep2 1062.6113681124598 1062.61026993586 70.094 2 0.22464087005743183 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3'] 54033 14999 KYLSGIAHF True PC9_epitope_Rep3 1034.5549158654999 1034.55380993586 62.821 2 0.2246402481164152 0.00036105427849320016 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 105757 16432 SVIDHIHLI True PC9_epitope_Rep6 1045.59202965021 1045.59092993586 75.61 2 0.22463310087296084 0.00036105427849320016 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 29281 10236 FVDKNNDLLY True H1975_Epitope_Rep1 1239.61355294043 1239.61244993586 44.316 2 0.22463089923668697 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 139228 9070 YTADGKEVLEY True H1975_Epitope_Rep1 1286.6030478263801 1286.6019499358601 39.792 2 0.22462974764868565 0.00036105427849320016 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 118499 12568 VDSLLENLEK True NCI_RA007_Epitope_Rep1 1158.61321858726 1158.6121299358601 52.865 2 0.22462371518459923 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 69620 15812 LVTYVPVTTF True NCI_RA007_Epitope_Rep3 1138.62741209942 1138.62630993586 69.831 2 0.22461809619177345 0.00036105427849320016 0.9438714419765777 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 134514 18204 WVDPNSPVL True PC9_epitope_Rep6 1025.51819600361 1025.5170899358602 82.662 2 0.22461252710544335 0.00036105427849320016 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 53963 20133 KYITQGQLLQF True PC9_epitope_Rep1 1337.73433677945 1337.7332299358602 82.271 2 0.224600166763113 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 129273 5248 VTDQASHIY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 25.271 2 0.22459855661564446 0.00036105427849320016 0.9438714419765777 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 138877 7009 YSDRETQLY True H1975_Epitope_Rep3 1173.53021723929 1173.52912993586 31.924 2 0.22459584235925242 0.00036105427849320016 0.9438714419765777 ['ENSG00000198909|ENST00000361733|MAP3K3', 'nc|ENSG00000198909|Q99759-2|MAP3K3', 'ENST00000577784.1_1_17:61765908-61766726:+|nuORF', 'ENST00000577839.1_1_17:61766126-61767181:+|nuORF'] 102890 11637 SQIDPSSIERA True PC9_epitope_Rep1 1201.5938801250102 1201.59278993586 49.641 2 0.2245952549728559 0.00036105427849320016 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 104910 9377 STFQQM[Oxidation]WISK True NCI_RA007_Epitope_Rep3 1270.6016087381797 1270.6005099358601 43.975 2 0.22459092325253277 0.00036105427849320016 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 133691 20527 WLAEKLPTL True PC9_epitope_Rep1 1069.61718176889 1069.6160899358601 83.769 2 0.22458462580669591 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 104861 15151 STEQIPILY True H1975_Epitope_Rep2 1062.5597264624198 1062.5586299358602 63.434 2 0.22456640977527567 0.00036105427849320016 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 113693 7667 TRDETNYGI True PC9_epitope_Rep4 1067.4883524273098 1067.48724993586 36.872 2 0.22456280539603282 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 19393 8060 ELPDPQESIQR True H1975_Epitope_Rep1 1310.64664397386 1310.6455499358601 35.946 2 0.22455857732042137 0.00036105427849320016 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 94872 12608 RYNPNLNTW True PC9_epitope_Rep4 1176.5676058075198 1176.56650993586 56.336 2 0.22454636811304582 0.00036105427849320016 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 108430 6970 TEEGPTLSYGR True H1975_Epitope_Rep3 1208.567331024 1208.56622993586 31.772 2 0.22453505447832064 0.00036105427849320016 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 34672 10174 GQLDTPGVHNV True PC9_epitope_Rep1 1135.56218607391 1135.56108993586 44.01 2 0.2245199094206196 0.00036105427849320016 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 98109 17414 SIAGIFKEV True PC9_epitope_Rep6 962.54368247546 962.54258993586 79.599 2 0.22449986257783291 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 64012 4669 LQDAEIAR True NCI_RA007_Epitope_Rep4 914.4821448480599 914.48104993586 24.381 2 0.22448959439341581 0.00036105427849320016 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 30180 19965 FYTVIPHNF True PC9_epitope_Rep3 1136.5654805492 1136.5643899358602 82.041 2 0.22448923101679974 0.00036105427849320016 0.9438714419765777 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 94892 7825 RYPDNLKHL True PC9_epitope_Rep3 1154.61964138038 1154.61799490379 35.088 3 0.2244880309543302 0.00036105427849320016 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 53992 10969 KYLDNPNAL True PC9_epitope_Rep2 1046.53965972418 1046.53856993586 47.515 2 0.2244739801625019 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 90876 15646 RLAQEGIYTL True PC9_epitope_Rep2 1162.6346227381798 1162.63352993586 65.457 2 0.22446289289156404 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2', 'ENST00000513888.5_1_5:6600041-6604993:-|nuORF'] 55181 6679 LAPEYEAAATR True NCI_RA007_Epitope_Rep2 1190.59315184902 1190.5920499358601 30.591 2 0.22444848853083624 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 96958 10366 SEVEVIHVP True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 44.927 2 0.22444575738277997 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 74581 5882 NLDKNTVGY True H1975_Epitope_Rep3 1022.5032742154599 1022.50216993586 27.634 2 0.22444216382883062 0.00036105427849320016 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion'] 124282 10669 VLDELTLAR True H1975_Epitope_Rep3 1028.5866099165999 1028.58550993586 46.111 2 0.22443868425365265 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16723272-16723344:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 132696 19661 VYSEAARVLQF True PC9_epitope_Rep3 1281.67173652289 1281.67062993586 80.861 2 0.2244287893452195 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 44034 17059 ILLAEVDKV True PC9_epitope_Rep2 998.6011973515799 998.60010993586 70.869 2 0.22442834131507172 0.00036105427849320016 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 112136 14818 TLVEAIKQV True PC9_epitope_Rep2 999.5964463243098 999.59534993586 62.261 2 0.22442568947066702 0.00036105427849320016 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'MOV10|p.V542A|1|0.11|ENSG00000155363|chr1:112695420-112695420|T/C|missense_variant', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 54069 22799 KYLVIGDLLF True PC9_epitope_Rep3 1179.69034670915 1179.68924993586 92.967 2 0.22442165049547713 0.00036105427849320016 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 116841 12529 TYMKDLYQL True NCI_RA007_Epitope_Rep5 1173.5739966275698 1173.57288993586 54.847 2 0.2244093129673002 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 53194 5943 KTAEDAKDFFK True NCI_RA007_Epitope_Rep4 1298.65066672514 1298.64901490379 29.479 3 0.22440736788056578 0.00036105427849320016 0.9438714419765777 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5'] 61288 9248 LLDTPVKTQY True H1975_Epitope_Rep3 1176.63903941228 1176.6379499358602 40.564 2 0.22439222982382848 0.00036105427849320016 0.9438714419765777 ['ENSG00000168769|ENST00000380013|TET2', 'nc|ENSG00000168769|Q6N021-2|TET2', 'nc|ENSG00000168769|Q6N021-3|TET2'] 31597 7085 GEFVTTVQQR True NCI_RA007_Epitope_Rep1 1163.59348620219 1163.5923899358602 31.552 2 0.2243902485959628 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000014641|P40925-2|MDH1', 'ENSG00000014641|ENST00000233114|MDH1', 'nc|ENSG00000014641|P40925-3|MDH1'] 72398 13980 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54126993586 58.921 2 0.22438835076317803 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 14319 10429 DTDHYFLRY True H1975_Epitope_Rep1 1228.5512870370399 1228.5496349037899 45.069 3 0.22438744275868033 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 106744 19877 SYDPTIENTF True PC9_epitope_Rep5 1185.51898384925 1185.51788993586 81.509 2 0.22436681310462736 0.00036105427849320016 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB'] 13710 20868 DQIAKYWEL True PC9_epitope_Rep3 1164.5815245361598 1164.5804299358601 85.541 2 0.22435468705320066 0.00036105427849320016 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 11831 18546 DHMRFISEL True PC9_epitope_Rep3 1146.54917886206 1146.5480899358602 76.557 2 0.2243497448756334 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 11563 13452 DGQFSVLFTK True H1975_Epitope_Rep3 1140.5815245361598 1140.5804299358601 57.016 2 0.224330283472553 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 135815 6601 YEQAARVAIE True H1975_Epitope_Rep2 1148.5825871653199 1148.5814899358602 30.301 2 0.22432404320035743 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 135592 8175 YEELQSLAGK True H1975_Epitope_Rep3 1136.5713537752797 1136.5702499358601 36.425 2 0.2243211862733455 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 7097 6560 AQYEDIANR True PC9_epitope_Rep2 1078.5043368446197 1078.5032299358602 30.645 2 0.22431433186415264 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 108817 9710 TEQPPSPLP True H1975_Epitope_Rep2 964.48656152216 964.48546993586 42.333 2 0.22430571576283093 0.00036105427849320016 0.9438714419765777 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 29802 11078 FVTNDAATILR True NCI_RA007_Epitope_Rep1 1219.65608645875 1219.6549899358602 47.088 2 0.22430359807172018 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 24284 19970 FAAPEKDIFL True PC9_epitope_Rep3 1149.60701100801 1149.6059099358602 82.06 2 0.2242984249744761 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183826|Q96Q07-3|BTBD9', 'nc|ENSG00000183826|Q96Q07-2|BTBD9', 'ENSG00000183826|ENST00000481247|BTBD9'] 10076 5855 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep3 1119.5171508382302 1119.51604993586 30.009 2 0.22429437426697973 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 132366 20047 VYM[Oxidation]DWYEKF True PC9_epitope_Rep1 1295.55326156343 1295.55216993586 81.936 2 0.22429407116908287 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 27645 6482 FQDDDQTRV True PC9_epitope_Rep1 1122.4941660837399 1122.4930699358601 29.738 2 0.22428408486978704 0.00036105427849320016 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 53756 12978 KYFDEHYEY True PC9_epitope_Rep3 1292.53496826656 1292.5338699358601 54.947 2 0.22428020975715135 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 27637 23305 FQAEIAQLMSL True PC9_epitope_Rep1 1249.63765951329 1249.63656993586 94.431 2 0.22427836031523163 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 28863 9456 FTDQQKLIY True H1975_Epitope_Rep2 1154.5971746002997 1154.5960699358602 41.34 2 0.2242771822533617 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 102896 10594 SQIDPSSIERA True PC9_epitope_Rep4 1201.5938801250102 1201.59278993586 48.491 2 0.22427664933958325 0.00036105427849320016 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 127637 7574 VRDQTELRL True PC9_epitope_Rep4 1128.62512068364 1128.6234749037899 36.512 3 0.22427506431808816 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1', 'IRAK1|p.P308Hfs*45|1|0.26|ENSG00000184216|chrX:154017054-154017054|G/-|frameshift_variant'] 115198 15650 TVATENEVFRV True PC9_epitope_Rep5 1263.64591569787 1263.6448099358602 65.209 2 0.22427003438269288 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16'] 71006 7213 MEQQTLSIAKA True H1975_Epitope_Rep2 1218.62782310558 1218.62672993586 32.679 2 0.2242228992095217 0.00036105427849320016 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 18299 12886 EITALAPSTMK True PC9_epitope_Rep3 1160.61111041228 1160.61000993586 54.582 2 0.22419523984240983 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 137102 10575 YLDDPDLKY True H1975_Epitope_Rep2 1140.5339056374 1140.53280993586 45.699 2 0.22419475711556464 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 133290 12090 WELVTREVP True H1975_Epitope_Rep2 1127.59750895347 1127.59640993586 51.587 2 0.22418971589346678 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 53463 13825 KVIEGLDTGL True PC9_epitope_Rep6 1043.5862755634298 1043.5851699358602 64.984 2 0.224187508874195 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 41848 12543 IDTIEIITDR True NCI_RA007_Epitope_Rep2 1187.63976768827 1187.6386699358602 53.403 2 0.22418557846614232 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 105010 3153 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 17.62 3 0.2241807558874937 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 14901 15377 DYKESFNTI True PC9_epitope_Rep5 1115.5135045459901 1115.5124099358602 64.156 2 0.2241621881329594 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 136550 14833 YHSEVPVSL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 62.191 2 0.2241546773539999 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 7831 10500 [Acetylation]-ATAEVLNIGKK True NCI_RA007_Epitope_Rep2 1184.6764878664596 1184.67538993586 45.437 2 0.2241385770282557 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 120997 5827 VGEVIVTK True NCI_RA007_Epitope_Rep2 843.50656869075 843.50546993586 27.284 2 0.2241089828134789 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 23636 12702 EYGFQNALIVR True H1975_Epitope_Rep3 1308.68263555976 1308.68152993586 54.069 2 0.2241086408556157 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 117024 16320 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 67.771 2 0.22410019572374223 0.00036105427849320016 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 125848 12475 VNQIGSVTESL True NCI_RA007_Epitope_Rep1 1145.59281749585 1145.59172993586 52.503 2 0.2240953444916843 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 3843 12835 AGYTDNLVRV True PC9_epitope_Rep6 1106.57202248162 1106.57092993586 60.88 2 0.22408985868739217 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 60114 9410 LHVDPENFR True PC9_epitope_Rep4 1125.55670677065 1125.5550749037902 43.804 3 0.22408656003382277 0.00036105427849320016 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__Q3SX09'] 116874 5473 TYNQKHSLF True NCI_RA007_Epitope_Rep3 1136.5614577979202 1136.55982490379 28.536 3 0.22406736568267113 0.00036105427849320016 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 86982 19336 QRVWAEYAL True PC9_epitope_Rep3 1134.5821932425 1134.58108993586 79.596 2 0.22405352452935764 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 129207 4372 VTDKNPAGDY True H1975_Epitope_Rep2 1078.4931034545798 1078.49200993586 21.929 2 0.22403498493446802 0.00036105427849320016 0.9438714419765777 ['ENSG00000196663|ENST00000359520|TECPR2', 'ENST00000559124.1_1_14:102963896-102964591:+|nuORF'] 23839 22956 EYLPIGGLAEF True PC9_epitope_Rep2 1207.6124903112698 1207.6113899358602 93.793 2 0.22402554931864563 0.00036105427849320016 0.9438714419765777 ['CNOT1-GOT2|1|fusion', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2'] 43318 11543 IHEPEPHIL True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 49.397 2 0.2240139228162869 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 9135 9015 AVLSWKLAK True NCI_RA007_Epitope_Rep4 1014.6226015024998 1014.62150993586 41.509 2 0.2240105081617766 0.00036105427849320016 0.9438714419765777 ['ENSG00000188725|ENST00000339020|SMIM15'] 77131 16514 NYATRIVTL True PC9_epitope_Rep1 1049.58694426977 1049.58584993586 68.344 2 0.22400120666506684 0.00036105427849320016 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 86613 12811 QRDPNSPLYSV True PC9_epitope_Rep5 1274.62551460646 1274.62440993586 54.288 2 0.22400118092229132 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF'] 77638 12166 NYYEQWGK True PC9_epitope_Rep3 1086.47705946762 1086.4759699358601 51.834 2 0.22399094423930957 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 2353 7926 AEQEPTAEQLA True H1975_Epitope_Rep2 1185.55134660669 1185.5502499358602 35.433 2 0.22398478348878237 0.00036105427849320016 0.9438714419765777 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'nc|ENSG00000141522|P52565-2|ARHGDIA'] 73061 12713 NDLAVVDVR True PC9_epitope_Rep3 999.53490869691 999.53380993586 53.923 2 0.22398103022211774 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 76582 5842 NTEEEGLKY True H1975_Epitope_Rep2 1081.4927691014097 1081.49166993586 27.459 2 0.2239793387406492 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 105756 16429 SVIDHIHLI True PC9_epitope_Rep6 1045.59202965021 1045.59092993586 75.597 2 0.2239725832997214 0.00036105427849320016 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 89254 7036 RELAQQVQQVA True NCI_RA007_Epitope_Rep4 1268.68369818892 1268.68260993586 33.691 2 0.2239686354057703 0.00036105427849320016 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 93852 20733 RVFSDIIYTV True PC9_epitope_Rep1 1211.65502382959 1211.65392993586 84.576 2 0.22396319888599206 0.00036105427849320016 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 89718 11610 REYQDLLNV True NCI_RA007_Epitope_Rep4 1148.5825871653199 1148.5814899358602 51.612 2 0.22395855414322766 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 114238 15292 TRYDLYHTF True PC9_epitope_Rep5 1214.5720224816198 1214.57038490379 63.83 3 0.22395159557890604 0.00036105427849320016 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 68719 9782 LVDEPQNLIK True NCI_RA007_Epitope_Rep1 1167.6499384491499 1167.6488499358602 42.052 2 0.2239335344773648 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 22275 4099 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 20.892 2 0.22392934070538406 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 116775 21898 TYLNWLVRM True PC9_epitope_Rep5 1194.6219498795 1194.6208499358602 89.268 2 0.22392788839601682 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 138859 4620 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 22.893 2 0.2239266103744972 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 40158 5275 HRDYETATL True PC9_epitope_Rep6 1104.51998690876 1104.5188899358602 28.081 2 0.22392393600926333 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 36402 15406 GVIDLIFEK True NCI_RA007_Epitope_Rep3 1032.58554728744 1032.5844499358602 68.154 2 0.22391580620888804 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 117102 13926 TYSEKTTLF True PC9_epitope_Rep1 1088.5389910178399 1088.5378899358602 58.402 2 0.2239121129670156 0.00036105427849320016 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 44987 12996 IQIM[Oxidation]KVEEI True PC9_epitope_Rep4 1117.60529713629 1117.6041899358602 57.883 2 0.2239091845828041 0.00036105427849320016 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 47893 15664 IYVHDLLTF True NCI_RA007_Epitope_Rep4 1119.59644632431 1119.5953499358602 68.038 2 0.2239047129512493 0.00036105427849320016 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 97775 9208 SHHENLVSF True PC9_epitope_Rep2 1068.49885754136 1068.49776993586 40.758 2 0.22390244650713026 0.00036105427849320016 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 4801 6521 ALELEQER True NCI_RA007_Epitope_Rep2 986.50327421546 986.50216993586 29.975 2 0.22389997490551095 0.00036105427849320016 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 117140 16122 TYSPALNKMF True PC9_epitope_Rep6 1170.5743309807401 1170.5732299358601 74.355 2 0.22389951480748563 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 105362 20983 STYKFFEVI True PC9_epitope_Rep3 1132.580461907 1132.57936993586 85.987 2 0.2238990653679205 0.00036105427849320016 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 94860 14133 RYNESLTNF True PC9_epitope_Rep1 1142.5356369729 1142.53452993586 59.188 2 0.22389386550305268 0.00036105427849320016 0.9438714419765777 ['ENSG00000113300|ENST00000261951|CNOT6'] 17502 20807 EHIGIGLLSL True PC9_epitope_Rep4 1050.60734536118 1050.6062499358602 88.184 2 0.22389244413976786 0.00036105427849320016 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 1300 7456 AEDVLSGKVSA True H1975_Epitope_Rep2 1074.55570371114 1074.55460993586 33.627 2 0.22388888586964298 0.00036105427849320016 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 129212 4413 VTDKSMVDKY True H1975_Epitope_Rep3 1184.5747249035599 1184.57308490379 22.097 3 0.2238835462416244 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 18274 7185 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1176.6060254122801 1176.6049299358601 31.938 2 0.22387915029898828 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 99817 7153 SLGTADVHFER True NCI_RA007_Epitope_Rep5 1230.59929985862 1230.59764490379 34.19 3 0.22387202751009522 0.00036105427849320016 0.9438714419765777 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 13911 18922 DRDSTFNVF True PC9_epitope_Rep2 1099.4934378077498 1099.4923499358601 78.148 2 0.22386937344400118 0.00036105427849320016 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'FKBP9|p.N129Ifs*10|1|0.39|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 136328 10279 YHADIYDKV True PC9_epitope_Rep3 1122.53457434374 1122.5329349037902 44.486 3 0.22385906163448643 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 123385 5547 VIDDTNITR True NCI_RA007_Epitope_Rep5 1045.5403880001702 1045.53928993586 28.022 2 0.22385294751398863 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 108830 4627 TEQQQRFHEI True H1975_Epitope_Rep3 1314.6316626160599 1314.63001490379 22.92 3 0.22382388590760374 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 17904 12350 EIDM[Oxidation]NDIKAFY True H1975_Epitope_Rep3 1373.6173183719698 1373.61622993586 52.69 2 0.22381018278137566 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 37555 15571 GYPLWKVTF True NCI_RA007_Epitope_Rep4 1109.59096702105 1109.5898699358602 67.643 2 0.22380303798734028 0.00036105427849320016 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 112702 4384 TPGPGAQSALR True H1975_Epitope_Rep3 1053.55670677065 1053.55560993586 21.983 2 0.22380193521971734 0.00036105427849320016 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14'] 116763 18654 TYLEKFQNL True PC9_epitope_Rep3 1154.5971746002997 1154.5960699358602 76.972 2 0.22379513788772668 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 126827 4801 VPSYPSKSA True PC9_epitope_Rep1 934.47599683846 934.47488993586 23.336 2 0.22378913179093593 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 117213 18254 TYTSYLDKF True PC9_epitope_Rep2 1136.5389910178399 1136.5378899358602 75.533 2 0.22378567595366827 0.00036105427849320016 0.9438714419765777 ['ENSG00000069956|ENST00000261845|MAPK6'] 138402 13156 YRDPTTVTTL True PC9_epitope_Rep1 1165.59790287629 1165.5968099358602 55.469 2 0.22378156750970454 0.00036105427849320016 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 24830 11445 FDAGELITQR True NCI_RA007_Epitope_Rep2 1148.5825871653199 1148.5814899358602 49.11 2 0.22376459511371474 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'ENST00000355202.8_1_19:38187835-38188303:-|nuORF'] 77347 22159 NYLDRFLSL True PC9_epitope_Rep5 1139.59750895347 1139.59640993586 90.272 2 0.22376393688313728 0.00036105427849320016 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 64308 20717 LQMEPAAFQAL True PC9_epitope_Rep4 1217.61144476545 1217.61034993586 87.851 2 0.22376236891060763 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 137133 11267 YLDIPNPRY True H1975_Epitope_Rep1 1149.58185888933 1149.5807699358602 48.315 2 0.22375976977163617 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 88351 20392 QYMELFNKI True PC9_epitope_Rep3 1184.5899810448798 1184.5888899358602 83.688 2 0.22375616781123028 0.00036105427849320016 0.9438714419765777 ['ENSG00000124641|ENST00000265350|MED20'] 54172 16167 KYPDIISRI True PC9_epitope_Rep1 1103.63389446219 1103.63278993586 67.0 2 0.22375222097619124 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 108801 6398 TEQGGAHFSV True H1975_Epitope_Rep2 1031.4672230599099 1031.4661299358602 29.535 2 0.2237470393910919 0.00036105427849320016 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 98927 8292 SIYGEKFEDEN True NCI_RA007_Epitope_Rep2 1329.57247597409 1329.57136993586 36.893 2 0.22371863396276495 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID'] 116710 22096 TYKNFFYLI True PC9_epitope_Rep1 1207.62774645259 1207.62664993586 89.805 2 0.22370102162270952 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 4208 11675 AIDQLHLEY True H1975_Epitope_Rep3 1100.5502244078798 1100.54912993586 50.045 2 0.22370044481121612 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 28584 19445 FSPAGPILSIR True PC9_epitope_Rep1 1156.6604435632 1156.65934993586 79.609 2 0.2236934969758149 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 138847 4644 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 22.962 2 0.2236923692659907 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 2418 4993 AEQLRDEEV True H1975_Epitope_Rep2 1087.51456717515 1087.51346993586 24.291 2 0.22369210932128772 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 106851 22135 SYIDVLPEF True PC9_epitope_Rep4 1081.53317736141 1081.53208993586 93.358 2 0.22368849333298502 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 88018 7540 QVSPEAGVQKV True PC9_epitope_Rep5 1140.6138872935999 1140.61278993586 33.95 2 0.22368426394805568 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 114909 7743 TTEVHPELY True H1975_Epitope_Rep1 1087.5185899264297 1087.51807496793 34.743 1 0.22367045823452514 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 106680 18985 SYANVKQWL True PC9_epitope_Rep3 1107.57129420563 1107.57018993586 78.249 2 0.22365880242391314 0.00036105427849320016 0.9438714419765777 ['ENSG00000174903|ENST00000311481|RAB1B', 'nc|ENSG00000233111|Q92928|RAB1C'] 139879 9133 YVDQAELEKY True H1975_Epitope_Rep2 1256.5924831426798 1256.5913899358602 40.083 2 0.223653013945547 0.00036105427849320016 0.9438714419765777 ['ENSG00000112972|ENST00000325110|HMGCS1', 'ENST00000507004.1_1_5:43298575-43313480:-|nuORF', 'ENST00000507293.1_1_5:43298575-43313499:-|nuORF'] 130717 12131 VVDLLAPYAK True H1975_Epitope_Rep3 1087.62774645259 1087.62664993586 51.829 2 0.2236484294140494 0.00036105427849320016 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 108313 12669 TEDGDSFLHLA True H1975_Epitope_Rep2 1203.54078192299 1203.53968993586 53.831 2 0.22364823972144543 0.00036105427849320016 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'NFKBIA|p.L131Wfs*33|1|0.1|ENSG00000100906|chr14:35403306-35403306|G/-|frameshift_variant', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 61943 19006 LLLNNDNLLR True PC9_epitope_Rep3 1196.6877209401998 1196.68662993586 78.328 2 0.22364349064624947 0.00036105427849320016 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 18288 8418 EITALAPSTM[Oxidation]K True PC9_epitope_Rep4 1176.6060254122801 1176.6049299358601 39.845 2 0.22363998165137616 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 61277 10031 LLDTAQRALY True H1975_Epitope_Rep3 1162.6346227381798 1162.63352993586 43.619 2 0.22363577090116257 0.00036105427849320016 0.9438714419765777 ['ENSG00000249471|ENST00000336614|ZNF324B', 'ENSG00000083812|ENST00000196482|ZNF324'] 116754 12482 TYLEKAIKI True PC9_epitope_Rep4 1077.6433965167298 1077.6422899358602 55.818 2 0.22361356432491997 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 81368 7653 PPSPPPPPP True PC9_epitope_Rep4 881.4647038787699 881.46360993586 36.819 2 0.22360727956127813 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant', 'ENST00000230859.7_2_5:6713434-6713641:+|nuORF', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000100312|ENST00000216139|ACR', 'ENST00000395348.7_1_10:61444064-61469743:-|nuORF'] 94923 7603 RYPDSHQLF True NCI_RA007_Epitope_Rep3 1161.55670677065 1161.55560993586 37.039 2 0.22360602502273974 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 103606 14270 SRDKTIIMW True PC9_epitope_Rep2 1148.60121443492 1148.59957490379 60.156 3 0.22360558130523522 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 140338 19187 YYEHEFVEL True PC9_epitope_Rep1 1227.5448046742697 1227.54370993586 78.597 2 0.22360217477599192 0.00036105427849320016 0.9438714419765777 ['ATP9B|p.T1064Rfs*5|1|0.1|ENSG00000166377|chr18:79374017-79374017|A/-|frameshift_variant', 'nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 69663 16320 LVVTNLDKL True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 70.737 2 0.2235959477573258 0.00036105427849320016 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 76043 19260 NRLEEPGNFVL True PC9_epitope_Rep5 1286.6619001151798 1286.66080993586 79.124 2 0.22359084636227278 0.00036105427849320016 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 118106 9882 VATWFNQPAR True NCI_RA007_Epitope_Rep5 1188.6039913162397 1188.60288993586 44.655 2 0.2235895225379215 0.00036105427849320016 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 43566 16673 IIEPSLRQLAQ True PC9_epitope_Rep2 1266.72958575218 1266.7284899358601 69.375 2 0.22358728849283696 0.00036105427849320016 0.9438714419765777 ['ENSG00000221983|ENST00000442744|UBA52'] 35176 15105 GSDEPAFMYY True H1975_Epitope_Rep3 1178.45902644498 1178.4579299358602 63.5 2 0.22358608021666296 0.00036105427849320016 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 47506 13414 IYLEKLKTI True PC9_epitope_Rep4 1119.69034670915 1119.68924993586 59.498 2 0.2235751752704236 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 136330 10007 YHADIYDKV True PC9_epitope_Rep5 1122.53457434374 1122.5329349037902 43.469 3 0.22357435227042743 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 10055 8337 AYVHMVTHF True NCI_RA007_Epitope_Rep3 1103.52223583823 1103.52112993586 39.909 2 0.22356886190665926 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 16365 7703 EELEAALQR True H1975_Epitope_Rep1 1057.5403880001697 1057.53928993586 34.592 2 0.2235478856428466 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 53084 4391 KSDSGKPYYY True H1975_Epitope_Rep1 1206.55570371114 1206.55460993586 21.894 2 0.22354722507858746 0.00036105427849320016 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000467114.2_1_2:153535806-153549567:-|nuORF'] 28922 9514 FTEHEVQIY True H1975_Epitope_Rep2 1164.54513902744 1164.5440499358601 41.565 2 0.2235451558817286 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'nc|ENSG00000100784|O75582-3|RPS6KA5'] 7133 10337 AQYEHDLEV True PC9_epitope_Rep4 1102.4931034545798 1102.49200993586 47.453 2 0.22353669072655258 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 92113 10608 RPYQPLPEA True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 45.749 2 0.22351910551794993 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 94008 6285 RVQEAVESMVK True NCI_RA007_Epitope_Rep3 1274.66527124346 1274.6641699358602 31.725 2 0.2235178378317693 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 105642 20946 SVFKDFYEL True PC9_epitope_Rep3 1146.55972646242 1146.5586299358602 85.847 2 0.22351599431613553 0.00036105427849320016 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB'] 116529 19834 TYEGIFKTL True PC9_epitope_Rep3 1070.56481184286 1070.56370993586 81.526 2 0.2235144476178414 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 40422 9675 HRYGDSEFTV True PC9_epitope_Rep2 1209.54145062933 1209.5398049037901 42.552 3 0.22351440092408836 0.00036105427849320016 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 98105 19180 SIAGIFKEV True PC9_epitope_Rep2 962.54368247546 962.54258993586 79.149 2 0.22351313193312708 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 17690 17688 EHSLPTLGL True PC9_epitope_Rep2 965.51819600361 965.51708993586 73.318 2 0.22350968655739165 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 45507 13087 ISESIKELQFY True H1975_Epitope_Rep1 1355.6972825643898 1355.69618993586 55.428 2 0.22350174877027992 0.00036105427849320016 0.9438714419765777 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF', 'ENST00000544507.1_1_11:114319952-114320694:+|nuORF', 'ENST00000539788.5_1_11:114314891-114320694:+|nuORF', 'ENST00000543131.5_1_11:114310234-114320694:+|nuORF', 'ENST00000538403.5_1_11:114314877-114320694:+|nuORF', 'nc|ENSG00000076043|Q9Y3B8-2|REXO2', 'nc|ENSG00000076043|Q9Y3B8-3|REXO2', 'ENSG00000076043|ENST00000265881|REXO2'] 7144 11541 AQYLINARL True NCI_RA007_Epitope_Rep1 1060.60292868708 1060.60182993586 48.859 2 0.22348502087257652 0.00036105427849320016 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 67148 10604 LTDEGYEHFY True H1975_Epitope_Rep1 1272.52988288612 1272.52878993586 45.742 2 0.22348226719298794 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 93971 5701 RVMQDIVYK True NCI_RA007_Epitope_Rep3 1150.6168644990596 1150.61576993586 29.401 2 0.2234685760298573 0.00036105427849320016 0.9438714419765777 ['ENST00000496911.1_1_2:74733844-74734286:-|nuORF', 'ENST00000480844.2_1_2:74732736-74734502:-|nuORF', 'nc|ENSG00000115289|Q9BSM1-3|PCGF1', 'ENST00000475863.5_1_2:74732272-74734286:-|nuORF', 'ENSG00000115289|ENST00000233630|PCGF1'] 87434 5249 QTEERVQPEY True H1975_Epitope_Rep3 1277.58879474457 1277.58768993586 25.275 2 0.2234658576052862 0.00036105427849320016 0.9438714419765777 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 105346 6921 STWEGIQAGK True NCI_RA007_Epitope_Rep3 1075.5298233164697 1075.5287299358602 34.326 2 0.22346056319047805 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 104214 5302 SSDNATLTHY True H1975_Epitope_Rep1 1107.4832670468702 1107.4821699358602 25.454 2 0.22345518152466629 0.00036105427849320016 0.9438714419765777 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 135545 6394 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 29.654 2 0.22345215882973718 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 40460 9733 HSDPSILGY True H1975_Epitope_Rep3 987.46616043075 987.46506993586 42.459 2 0.22344443068577344 0.00036105427849320016 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 139679 7220 YTTDRVM[Oxidation]TV True PC9_epitope_Rep1 1100.5172104078802 1100.5161099358602 32.586 2 0.22342587335144715 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 37956 6269 HEFDEQVAA True H1975_Epitope_Rep3 1044.4512386426 1044.45014993586 29.121 2 0.22342321015095376 0.00036105427849320016 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF', 'HERC2|p.R4650W|2|0.28|ENSG00000128731|chr15:28113644-28113644|G/A|missense_variant'] 1298 7266 AEDVLSGKVSA True H1975_Epitope_Rep2 1074.55570371114 1074.55460993586 32.884 2 0.2234225168422835 0.00036105427849320016 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 4564 9832 ALAAAGYDVEK True PC9_epitope_Rep1 1106.56078909158 1106.5596899358602 42.68 2 0.22339862335934405 0.00036105427849320016 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6'] 132943 22322 VYTVVDEMFL True PC9_epitope_Rep4 1214.5893123385397 1214.58820993586 94.1 2 0.22338727673302627 0.00036105427849320016 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 124327 13474 VLDPYLLKY True H1975_Epitope_Rep3 1122.63249747986 1122.6314099358601 57.101 2 0.22338660134765706 0.00036105427849320016 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 67616 5259 LTEVNKAGTQY True H1975_Epitope_Rep3 1222.61936659686 1222.61826993586 25.311 2 0.22338575801577495 0.00036105427849320016 0.9438714419765777 ['ENSG00000170542|ENST00000380698|SERPINB9'] 61701 19054 LLIDELNKL True PC9_epitope_Rep6 1069.63831113629 1069.63720993586 85.935 2 0.2233759140615073 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 26107 21094 FHFQDQQILTL True PC9_epitope_Rep1 1388.7088503075997 1388.7077499358602 85.968 2 0.2233755112846359 0.00036105427849320016 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 40356 6612 HRTELETKL True PC9_epitope_Rep1 1125.61422164677 1125.61258490379 30.235 3 0.22337502064530246 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 81482 22304 PQPDVFPLF True PC9_epitope_Rep4 1058.54368247546 1058.5431749679299 94.031 1 0.22337250645777945 0.00036105427849320016 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 62058 19253 LLMEHIQEI True PC9_epitope_Rep1 1124.58998104488 1124.5888899358602 78.856 2 0.2233606841028224 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 119128 7046 VEILANDQGNR True PC9_epitope_Rep2 1227.6207635791898 1227.6196699358602 32.501 2 0.22335968103314685 0.00036105427849320016 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 54124 15700 KYMVYPQTF True PC9_epitope_Rep4 1175.5685173243098 1175.56740993586 68.315 2 0.22335680480184353 0.00036105427849320016 0.9438714419765777 ['ENSG00000112996|ENST00000507110|MRPS30', 'MRPS30|p.V185Sfs*19|1|0.08|ENSG00000112996|chr5:44809514-44809515|-/A|frameshift_variant'] 15244 5196 EAGEQGDIEPR True PC9_epitope_Rep5 1199.5418445521498 1199.54074993586 25.003 2 0.22335677014277566 0.00036105427849320016 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 104371 7330 SSFSGLLRK True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 34.834 2 0.22333817097567368 0.00036105427849320016 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 107284 18107 SYQKVIELF True PC9_epitope_Rep6 1125.6070110080097 1125.6059099358602 82.285 2 0.22333369242054663 0.00036105427849320016 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 8788 6428 AVFDGAQVTSK True NCI_RA007_Epitope_Rep3 1121.57168812845 1121.5705899358602 32.299 2 0.22332905810044523 0.00036105427849320016 0.9438714419765777 ['ENSG00000175274|ENST00000525680|TP53I11'] 47823 21194 IYSIDFTRF True PC9_epitope_Rep1 1160.5866099165999 1160.58550993586 86.357 2 0.22332295072558334 0.00036105427849320016 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B'] 107296 13023 SYQRAFNEF True PC9_epitope_Rep4 1160.5250722892 1160.5239699358601 57.987 2 0.22331951518978235 0.00036105427849320016 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 89647 9245 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 40.518 3 0.22331639131109327 0.00036105427849320016 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 20703 11877 EQISDIDDAVR True PC9_epitope_Rep4 1259.59935942827 1259.5982699358601 53.46 2 0.2233143597893355 0.00036105427849320016 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 129312 14369 VTDSGPTFNYL True H1975_Epitope_Rep2 1212.56626839484 1212.56516993586 60.42 2 0.22330504649809432 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 73458 7581 NEVENQILTR True H1975_Epitope_Rep1 1214.6255146064598 1214.62440993586 34.153 2 0.2232993203175553 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 32087 6902 GEYEWVHKP True H1975_Epitope_Rep2 1143.53490869691 1143.53326490379 31.468 3 0.22329827934814803 0.00036105427849320016 0.9438714419765777 ['ENSG00000117133|ENST00000370654|RPF1'] 11385 6785 DFHVDEQTTVK True NCI_RA007_Epitope_Rep2 1317.62009487285 1317.61898993586 31.008 2 0.22328909402633826 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 70064 15996 LYHDIFSRL True PC9_epitope_Rep6 1162.61349337078 1162.6118549037901 73.84 3 0.22327911752819368 0.00036105427849320016 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 24132 7195 EYSKQMQRF True PC9_epitope_Rep5 1215.57064258263 1215.56899490379 32.641 3 0.2232784126258369 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 116776 21222 TYLPAGQSVLL True PC9_epitope_Rep1 1160.64412479272 1160.64302993586 86.454 2 0.22326910673208805 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'nc|ENSG00000167085|P35232-2|PHB1'] 71700 4404 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 22.049 2 0.2232673367594211 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 136626 10002 YIDEQFERY True H1975_Epitope_Rep2 1261.5615173675699 1261.5604299358602 43.462 2 0.22324613345943728 0.00036105427849320016 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 30102 19629 FYPPHPDYTW True PC9_epitope_Rep5 1321.5767735088898 1321.57566993586 80.555 2 0.22324474767064237 0.00036105427849320016 0.9438714419765777 ['ENSG00000130309|ENST00000252599|COLGALT1'] 16782 12161 EFGPVVIDYGK True H1975_Epitope_Rep3 1222.6233893481397 1222.6222899358602 51.948 2 0.22322520111676122 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 67564 8053 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.5131299358602 35.924 2 0.22322345626569043 0.00036105427849320016 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 47223 20172 IYDKFIAQL True PC9_epitope_Rep5 1109.6120963884498 1109.61098993586 82.64 2 0.22321941434419515 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 97850 5784 SHITPSTQQHL True PC9_epitope_Rep1 1247.62584895963 1247.62420490379 27.064 3 0.22321516334708866 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 12596 12610 DLDSRVLYY True H1975_Epitope_Rep3 1142.5607890915799 1142.5596899358602 53.709 2 0.22320371374788722 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 23984 19075 EYPDRIMNTF True PC9_epitope_Rep5 1284.5808729131597 1284.5797699358602 78.402 2 0.22320278010327207 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 116507 12163 TYDSVTDKF True PC9_epitope_Rep2 1074.48695544498 1074.4858499358602 52.097 2 0.22318999482922833 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 24409 13744 FAFQAEVNR True PC9_epitope_Rep1 1080.53524305008 1080.5341499358601 57.711 2 0.2231886033295336 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000559111.1_1_15:99797871-99798159:+|nuORF'] 53733 18865 KYEELFPAF True PC9_epitope_Rep6 1142.5648118428596 1142.56370993586 85.213 2 0.22318709788052973 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 71949 19213 MPTLPPPSV True PC9_epitope_Rep5 937.49428975489 937.49318993586 78.942 2 0.22318079551645953 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 28658 15675 FSSPHLVQV True PC9_epitope_Rep3 1012.5341804209198 1012.53308993586 65.437 2 0.2231745759202907 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 70989 6797 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep2 1282.5975859869 1282.59648993586 31.061 2 0.2231513552527165 0.00036105427849320016 0.9438714419765777 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 87050 14045 QSDPWQQELY True H1975_Epitope_Rep1 1292.5673310240002 1292.56622993586 59.188 2 0.22315025762597235 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 92219 19997 RQIDQFLVV True PC9_epitope_Rep5 1116.62914343492 1116.6280499358602 81.972 2 0.22314921668860227 0.00036105427849320016 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 27678 16630 FQDENHLYL True PC9_epitope_Rep5 1177.54038800017 1177.53928993586 68.973 2 0.22314580278567006 0.00036105427849320016 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 83110 22392 PYNPLWAQL True PC9_epitope_Rep1 1100.5654805492 1100.5643899358602 90.949 2 0.22312953875759614 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 53223 8983 KTDSDSDLQLY True H1975_Epitope_Rep2 1283.58812603823 1283.58702993586 39.507 2 0.22312033454784813 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 34612 12326 GQIDADELQRC True PC9_epitope_Rep1 1246.5612000977399 1246.56010993586 52.268 2 0.22311789738695526 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000489079.1_1_7:87840172-87856229:-|nuORF', 'ENST00000488015.5_1_7:87840172-87849341:-|nuORF'] 37896 5928 HEDFEKSLSA True H1975_Epitope_Rep2 1161.53021723929 1161.52912993586 27.786 2 0.22311696996386057 0.00036105427849320016 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 132254 19474 VYKVPPFTF True PC9_epitope_Rep4 1096.59571804832 1096.5946299358602 83.023 2 0.22311119203607352 0.00036105427849320016 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 123135 9455 VHDPAGALQAA True PC9_epitope_Rep5 1048.5301576696397 1048.5290699358602 41.325 2 0.22311057236773132 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 70716 10916 M[Oxidation]DVAASEFFR True H1975_Epitope_Rep1 1187.5281094447498 1187.5270099358602 46.95 2 0.2231098871328129 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 27763 21066 FQEEDFPAL True PC9_epitope_Rep2 1094.4920408254197 1094.49094993586 86.487 2 0.22310872269484144 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 135223 13699 YAYDGKDYL True PC9_epitope_Rep2 1106.4920408254197 1106.49094993586 57.984 2 0.22310522186196438 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 76495 7969 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.5822099358602 35.601 2 0.22310412666312376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 107101 13999 SYMGHFDLL True NCI_RA007_Epitope_Rep3 1081.49026700361 1081.4891699358602 62.372 2 0.22309354176298254 0.00036105427849320016 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 114841 12039 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.4974899358601 51.387 2 0.22307942478486997 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 114160 8407 TRSTFSTNY True PC9_epitope_Rep1 1075.49343780775 1075.4923499358601 37.174 2 0.2230766498331486 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 11844 12911 DHM[Oxidation]RFISEL True PC9_epitope_Rep2 1162.54409386206 1162.54298993586 54.958 2 0.22307285235271027 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 25070 15607 FDEISFVNFAR True H1975_Epitope_Rep1 1343.65100107831 1343.64990993586 65.316 2 0.22307190423773898 0.00036105427849320016 0.9438714419765777 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 21485 5651 ERQPGAASL True PC9_epitope_Rep5 927.4773938207899 927.47628993586 26.735 2 0.22305691650416398 0.00036105427849320016 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 41062 13620 HYKPTPLYF True PC9_epitope_Rep2 1164.59678067748 1164.59568993586 57.681 2 0.2230485263203045 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 77469 20790 NYPETLGRLLI True PC9_epitope_Rep2 1287.7186867153098 1287.7175899358601 85.41 2 0.22304325830545096 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 2428 3953 AEQLRM[Oxidation]EET True H1975_Epitope_Rep2 1121.5022886197298 1121.50118993586 20.27 2 0.22303453099318138 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 70981 16469 MEQISQFLQAA True H1975_Epitope_Rep2 1264.61217304144 1264.61106993586 68.566 2 0.22302080265223745 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 139805 7578 YVDDPYQKY True H1975_Epitope_Rep2 1189.5291546101298 1189.52804993586 34.1 2 0.22300576051415386 0.00036105427849320016 0.9438714419765777 ['ENSG00000132313|ENST00000337109|MRPL35'] 68811 8767 LVDSKGFDEY True H1975_Epitope_Rep1 1171.5397192938299 1171.5386299358602 38.652 2 0.22300542586177283 0.00036105427849320016 0.9438714419765777 ['ENSG00000164687|ENST00000297258|FABP5'] 14201 16651 DSTLIM[Oxidation]QLLR True NCI_RA007_Epitope_Rep1 1204.6485589305998 1204.64746993586 68.888 2 0.22299738265754074 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 119473 12192 VEQDFHLEIA True H1975_Epitope_Rep2 1199.58225281215 1199.5811499358601 51.978 2 0.22299684936015401 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000239732|Q9NR96-4|TLR9', 'ENSG00000247596|ENST00000305533|TWF2'] 68778 9456 LVDPASHTLY True H1975_Epitope_Rep3 1114.56587447202 1114.56476993586 41.376 2 0.2229896295282183 0.00036105427849320016 0.9438714419765777 ['SEMA4F|p.P563Lfs*9|1|0.13|ENSG00000135622|chr2:74679319-74679319|C/-|frameshift_variant', 'nc|ENSG00000135622|O95754-2|SEMA4F', 'ENSG00000135622|ENST00000357877|SEMA4F'] 47605 15052 IYNQVKQII True PC9_epitope_Rep5 1117.64954452633 1117.64844993586 62.904 2 0.22298877595390115 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 21221 19344 ERFNVPVSL True PC9_epitope_Rep3 1059.5712942056298 1059.57018993586 79.628 2 0.22298814600390535 0.00036105427849320016 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 53968 17852 KYITQGQLLQF True PC9_epitope_Rep6 1337.73433677945 1337.7332299358602 81.296 2 0.22298797622397004 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 8619 15160 AVALERTFVGA True PC9_epitope_Rep2 1132.62405805448 1132.62296993586 63.571 2 0.22298547572295008 0.00036105427849320016 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN'] 128257 8357 VSAEEALKY True H1975_Epitope_Rep2 1008.5127762699999 1008.51166993586 37.097 2 0.2229852038112399 0.00036105427849320016 0.9438714419765777 ['ENSG00000070061|ENST00000374647|ELP1'] 12665 5972 DLEPGTM[Oxidation]DSVR True H1975_Epitope_Rep3 1234.54996708814 1234.54886993586 27.982 2 0.22297071954915806 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 94645 21838 RYLDLFTSF True PC9_epitope_Rep2 1160.5866099165999 1160.58550993586 89.475 2 0.22295966323578803 0.00036105427849320016 0.9438714419765777 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 48971 19934 KFAEEFYSF True PC9_epitope_Rep2 1166.5284263341398 1166.52732993586 82.073 2 0.22295430471690522 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 105641 20573 SVFKDFYEL True PC9_epitope_Rep2 1146.55972646242 1146.5586299358602 84.566 2 0.2229542569353433 0.00036105427849320016 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB'] 44928 7022 IQEENVIPR True H1975_Epitope_Rep1 1096.58767254576 1096.58656993586 32.045 2 0.2229374445798807 0.00036105427849320016 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC'] 46901 16210 IVIRGLNTI True PC9_epitope_Rep4 997.62841515893 997.62730993586 70.296 2 0.22293670628488074 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 65047 6702 LSDKNIEQY True H1975_Epitope_Rep2 1108.540053647 1108.53947496793 30.69 1 0.22293473580434428 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 116501 9276 TYDNVHQQF True PC9_epitope_Rep5 1150.5043368446202 1150.5032299358602 40.629 2 0.22292637242329 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 774 6982 AAYEAELGDAR True NCI_RA007_Epitope_Rep5 1164.54111627616 1164.54000993586 33.538 2 0.22292630690363516 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 25990 12643 FHAIIQERL True PC9_epitope_Rep2 1125.62947778809 1125.62782490379 53.941 3 0.2229246880605899 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 47219 20243 IYDKFIAQL True PC9_epitope_Rep1 1109.6120963884498 1109.61098993586 82.691 2 0.2229170665000555 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 6854 3534 AQIENSAAVQK True NCI_RA007_Epitope_Rep4 1157.6040508858898 1157.6029499358601 19.596 2 0.22288659006066708 0.00036105427849320016 0.9438714419765777 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 103548 11391 SRDDTTLNAL True PC9_epitope_Rep1 1104.54111627616 1104.54000993586 48.695 2 0.22288488212456514 0.00036105427849320016 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 106741 22557 SYDPLRIYLF True PC9_epitope_Rep1 1285.6706738937298 1285.6695699358602 91.57 2 0.22286726171321847 0.00036105427849320016 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000480929.1_1_2:219612227-219612548:+|nuORF'] 57235 5503 LEFEHQRAP True NCI_RA007_Epitope_Rep5 1125.55670677065 1125.5550749037902 27.856 3 0.22286462405562785 0.00036105427849320016 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 24478 21778 FAIDPHLLLSV True PC9_epitope_Rep4 1223.69140933831 1223.6903099358601 91.963 2 0.22286223038172398 0.00036105427849320016 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 63675 7158 LPPNVVEESAR True H1975_Epitope_Rep1 1209.63535101417 1209.63424993586 32.558 2 0.22286117823221777 0.00036105427849320016 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000024146', 'ENST00000462568.1_1_12:9232657-9243123:-|nuORF', 'ENSG00000175899|ENST00000318602|A2M'] 35390 9638 GTDDGRLLEY True H1975_Epitope_Rep2 1137.5302172392899 1137.52912993586 42.051 2 0.22285832419575283 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 22239 8876 ETDNMFNRY True H1975_Epitope_Rep3 1188.48697252832 1188.4858699358601 39.142 2 0.22285676449037273 0.00036105427849320016 0.9438714419765777 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF'] 7894 6689 ATAQVNPLYK True NCI_RA007_Epitope_Rep4 1103.5975089534697 1103.59640993586 32.354 2 0.22285516058579358 0.00036105427849320016 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENST00000425115.1_1_3:44751367-44751973:-|nuORF'] 40149 5729 HRDYETATL True PC9_epitope_Rep2 1104.51998690876 1104.5188899358602 27.428 2 0.22285422334454857 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 140875 15914 YYTPITPHL True PC9_epitope_Rep6 1103.56514619603 1103.56404993586 73.498 2 0.22285161589849617 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 19338 9217 ELNEALELK True H1975_Epitope_Rep3 1057.5655401188499 1057.56444993586 40.445 2 0.2228429157141325 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-7|TP53'] 22131 10567 ESYSIYVYK True NCI_RA007_Epitope_Rep1 1150.55464108198 1150.55354993586 45.087 2 0.22283652009757227 0.00036105427849320016 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 54419 17102 KYSNMEQSLF True PC9_epitope_Rep5 1245.5699738762899 1245.5688699358602 70.804 2 0.22283496659786697 0.00036105427849320016 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 73459 7734 NEVENQILTR True H1975_Epitope_Rep3 1214.6255146064598 1214.62440993586 34.733 2 0.22283487262499183 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 27562 7187 FPLTTESAM[Oxidation]K True NCI_RA007_Epitope_Rep5 1139.55326156343 1139.55216993586 34.323 2 0.22282519811612575 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 104234 11293 SSDNIMVQY True H1975_Epitope_Rep3 1055.45936079815 1055.45826993586 48.544 2 0.22281904764840804 0.00036105427849320016 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 29038 12683 FTLSHITQL True H1975_Epitope_Rep1 1058.5760452329 1058.57494993586 53.841 2 0.22281156605304547 0.00036105427849320016 0.9438714419765777 ['ENSG00000148484|ENST00000345264|RSU1'] 73631 7720 NGHVGISFVPK True NCI_RA007_Epitope_Rep1 1153.62439240765 1153.6227449037901 34.021 3 0.22279561977394668 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000466325.1_1_X:153581267-153581814:-|nuORF'] 112054 15021 TLTEEGVIKV True PC9_epitope_Rep5 1087.6124903112698 1087.6113899358602 62.782 2 0.2227872595258574 0.00036105427849320016 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 21333 16309 ERLGQFM[Oxidation]TL True PC9_epitope_Rep3 1109.55393026977 1109.55282993586 67.867 2 0.2227813699299983 0.00036105427849320016 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 89010 6724 REEDLDAVEA True H1975_Epitope_Rep2 1145.52004647841 1145.51894993586 30.778 2 0.22277396123462323 0.00036105427849320016 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF'] 24747 15622 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.4960299358602 68.014 2 0.22276038211435178 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 139437 12908 YTEPNYWIRY True H1975_Epitope_Rep1 1403.65100107831 1403.64990993586 54.724 2 0.2227568141881942 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion'] 135557 6610 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 30.333 2 0.22275573742097804 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 72116 14849 MRDPTFVRL True PC9_epitope_Rep5 1133.60154878809 1133.59990490379 62.118 3 0.2227551448615185 0.00036105427849320016 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 113751 19000 TRDPLVIEL True PC9_epitope_Rep4 1054.60225998074 1054.60116993586 81.174 2 0.22275208265875238 0.00036105427849320016 0.9438714419765777 ['ENSG00000134285|ENST00000550765|FKBP11', 'ENST00000551694.5_1_12:49318004-49319277:-|nuORF', 'nc|ENSG00000134285|Q9NYL4-2|FKBP11', 'ENST00000553027.1_1_12:49318338-49318461:-|nuORF', 'ENST00000546671.5_1_12:49317517-49318461:-|nuORF'] 73204 7402 NEFGEIQGDK True NCI_RA007_Epitope_Rep1 1135.51456717515 1135.51346993586 32.787 2 0.22275080160263813 0.00036105427849320016 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF'] 94013 6391 RVQEAVESMVK True NCI_RA007_Epitope_Rep5 1274.66527124346 1274.6641699358602 31.254 2 0.22274614801578127 0.00036105427849320016 0.9438714419765777 ['ENST00000498665.1_1_2:70527944-70529143:-|nuORF', 'ENST00000460307.1_1_2:70528513-70529143:-|nuORF', 'nc|ENSG00000035141|Q96C01|FAM136A', 'ENSG00000035141|ENST00000430566|FAM136A'] 116595 20061 TYGEIFEKF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 82.218 2 0.22274603090854217 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 47528 20606 IYLPYLHEW True PC9_epitope_Rep4 1232.62299542532 1232.62188993586 87.415 2 0.22273783982821851 0.00036105427849320016 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 77110 12550 NYAQVLDKF True NCI_RA007_Epitope_Rep5 1096.5553097883198 1096.5542099358602 54.927 2 0.2227367333051254 0.00036105427849320016 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 86514 6967 QRAITGASL True PC9_epitope_Rep4 915.5137793295099 915.51268993586 34.038 2 0.2227348953411276 0.00036105427849320016 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 132315 12084 VYLPNINKI True NCI_RA007_Epitope_Rep5 1072.62808080576 1072.6269899358601 53.139 2 0.22272896666336184 0.00036105427849320016 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 117129 17794 TYSPALNKMF True PC9_epitope_Rep2 1170.5743309807401 1170.5732299358601 73.735 2 0.22271896663490798 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 17890 4799 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 23.549 2 0.22271445405290924 0.00036105427849320016 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 77542 19561 NYRDTFFNL True PC9_epitope_Rep4 1188.55637241748 1188.55526993586 83.365 2 0.22271004512796175 0.00036105427849320016 0.9438714419765777 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 47345 10510 IYHNPTANSF True PC9_epitope_Rep1 1162.54072235334 1162.5396299358601 45.316 2 0.22269884747801666 0.00036105427849320016 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 63014 12653 LNGTDPEDVIR True PC9_epitope_Rep1 1227.60953018915 1227.6084299358602 53.539 2 0.22269727276339996 0.00036105427849320016 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 135966 14247 YFDEFGIIR True H1975_Epitope_Rep3 1158.5709598524597 1158.5698699358602 60.142 2 0.2226856223374525 0.00036105427849320016 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 24739 16332 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.4960299358602 68.068 2 0.22267772057873447 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 69670 14515 LVVYPWTQRF True NCI_RA007_Epitope_Rep3 1307.7026427283497 1307.7015499358602 64.4 2 0.22267655872145165 0.00036105427849320016 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070', 'ENSG00000213934|ENST00000330597|HBG1', 'ENSG00000213931|ENST00000396895|HBE1', 'ENSG00000196565|ENST00000336906|HBG2', 'CON__Q3SX09'] 52502 12787 KPNPNQIISV True PC9_epitope_Rep3 1108.62405805448 1108.62296993586 54.206 2 0.22267070289163568 0.00036105427849320016 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 35759 15122 GTVEIFPIFK True NCI_RA007_Epitope_Rep3 1149.6433965167298 1149.6422899358602 66.983 2 0.22266911824899174 0.00036105427849320016 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 138863 5755 YSDMREANY True H1975_Epitope_Rep2 1147.46042342731 1147.45932993586 27.133 2 0.2226675371299115 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 23786 21262 EYLADLYHF True PC9_epitope_Rep1 1169.5393253710101 1169.53822993586 86.609 2 0.22264747962297432 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 27730 14538 FQDPYTRSL True PC9_epitope_Rep5 1125.54547338061 1125.54436993586 60.919 2 0.22264704271370434 0.00036105427849320016 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 31523 4913 GEFEKKYVA True NCI_RA007_Epitope_Rep4 1069.5444107514497 1069.5433099358602 25.357 2 0.22264454044334606 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 54315 21850 KYPSPFFVF True PC9_epitope_Rep5 1130.5800679841798 1130.5789699358602 89.08 2 0.2226383150312943 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 53460 14717 KVIEGLDTGL True PC9_epitope_Rep4 1043.5862755634298 1043.5851699358602 64.544 2 0.2226376425947387 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 11630 6442 DHASIQM[Oxidation]NV True PC9_epitope_Rep5 1029.45494450449 1029.45384993586 29.753 2 0.2226312027737772 0.00036105427849320016 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 73062 10793 NDLAVVDVR True PC9_epitope_Rep6 999.53490869691 999.53380993586 52.354 2 0.2226277296495326 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 54094 14874 KYMDVQFDF True NCI_RA007_Epitope_Rep1 1191.52704643515 1191.5259499358601 61.915 2 0.22261948884419322 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 135546 6490 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 30.025 2 0.22261320257895967 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 15566 6351 EATDAIGHLDR True NCI_RA007_Epitope_Rep1 1196.5785644140399 1196.57692490379 28.73 3 0.22260755889090494 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 27983 7262 FQTEIQTVNK True NCI_RA007_Epitope_Rep1 1206.6244519772997 1206.62334993586 32.238 2 0.2226042617321989 0.00036105427849320016 0.9438714419765777 ['ENSG00000115866|ENST00000264161|DARS1', 'nc|ENSG00000115866|P14868-2|DARS1'] 96453 10904 SEIPKLPAV True NCI_RA007_Epitope_Rep3 952.5593325395998 952.55822993586 49.965 2 0.22259886593873188 0.00036105427849320016 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 43241 15393 IHDDLPTEL True PC9_epitope_Rep2 1051.5185899264302 1051.51748993586 64.491 2 0.2225925206331604 0.00036105427849320016 0.9438714419765777 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'ARHGEF40|p.A737Pfs*3|1|0.38|ENSG00000165801|chr14:21078445-21078445|G/-|frameshift_variant', 'ENST00000555232.5_1_14:21538555-21549271:+|nuORF'] 102006 4479 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 22.346 2 0.2225919342074427 0.00036105427849320016 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 94127 17993 RWFDKSFTF True PC9_epitope_Rep6 1232.59784330664 1232.59674993586 81.837 2 0.2225891309727801 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 8249 6746 ATILAGDVKVK True NCI_RA007_Epitope_Rep4 1113.6757592741699 1113.67466993586 32.569 2 0.22258446486665356 0.00036105427849320016 0.9438714419765777 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2'] 33376 10006 GLESDVAELR True H1975_Epitope_Rep1 1087.5509526838698 1087.54984993586 43.425 2 0.22256878196021082 0.00036105427849320016 0.9438714419765777 ['ENSG00000176619|ENST00000325327|LMNB2'] 8043 10358 ATDWGDTQAY True H1975_Epitope_Rep2 1126.4567179458597 1126.45562993586 44.85 2 0.22256232858012992 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 124290 19822 VLDFEHFLPM[Oxidation]L True H1975_Epitope_Rep1 1375.68461008615 1375.68350993586 82.49 2 0.22253180955937235 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 83599 4836 QDVDNASLAR True NCI_RA007_Epitope_Rep1 1087.52580056519 1087.52470993586 22.89 2 0.22253021950949337 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 138734 7202 YSADREDLY True H1975_Epitope_Rep3 1130.48801807414 1130.4869299358602 32.677 2 0.2225238659247041 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 107140 15173 SYM[Oxidation]LVNENRF True PC9_epitope_Rep5 1287.59177233047 1287.5906699358602 63.371 2 0.22251862584283189 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 86594 19823 QRDFNMIDL True PC9_epitope_Rep5 1150.54409348162 1150.54298993586 81.295 2 0.22251037349136393 0.00036105427849320016 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 136496 17914 YHISLEHEIL True PC9_epitope_Rep5 1252.64518742188 1252.6435349037902 73.924 3 0.22250107279667444 0.00036105427849320016 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant'] 39823 18227 HQFESSFEL True PC9_epitope_Rep3 1122.4981888350198 1122.49708993586 75.323 2 0.22249323090792292 0.00036105427849320016 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 138153 19903 YQLPEILRT True PC9_epitope_Rep3 1131.6288090817498 1131.6277099358601 81.798 2 0.2224875077390942 0.00036105427849320016 0.9438714419765777 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 39871 13069 HQIEAVDGEEL True PC9_epitope_Rep3 1238.5778957076998 1238.57678993586 55.296 2 0.22248674421435927 0.00036105427849320016 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 67556 9123 LTEQRALLY True H1975_Epitope_Rep3 1105.6131590176099 1105.61206993586 40.08 2 0.22248586068987003 0.00036105427849320016 0.9438714419765777 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2'] 64204 20345 LQIEDFEARI True PC9_epitope_Rep2 1232.6401020414398 1232.63900993586 83.679 2 0.22247867502597796 0.00036105427849320016 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 126681 17875 VPRPAVLDPAL True PC9_epitope_Rep1 1146.67609362734 1146.6749899358601 73.549 2 0.2224613795595093 0.00036105427849320016 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 83133 19740 PYRLIFEKF True PC9_epitope_Rep1 1211.6702799709099 1211.66863490379 80.757 3 0.22245908527087765 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 70907 10439 MELERIVSA True H1975_Epitope_Rep1 1046.5430308524599 1046.54192993586 45.109 2 0.22245826661244897 0.00036105427849320016 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 73775 18225 NHDFQALAL True PC9_epitope_Rep3 1027.50869394907 1027.50758993586 75.315 2 0.222429637447816 0.00036105427849320016 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 75350 15427 NQAKYIPEL True PC9_epitope_Rep5 1074.57095985246 1074.5698699358602 64.349 2 0.2224295204929402 0.00036105427849320016 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 119871 10621 VEVTEFEDIK True H1975_Epitope_Rep1 1207.59723416995 1207.59612993586 45.81 2 0.22242911583029112 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 67261 12781 LTDLYSPEY True H1975_Epitope_Rep2 1099.50735653639 1099.50624993586 54.266 2 0.22242807089251568 0.00036105427849320016 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 53370 6232 KTYGEIFEK True NCI_RA007_Epitope_Rep3 1113.57062549929 1113.5695299358601 31.518 2 0.22241485201590264 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 22122 8435 ESYDDVSSFR True H1975_Epitope_Rep1 1203.5043964142699 1203.50328993586 37.371 2 0.22241226717478504 0.00036105427849320016 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000463906.1_1_1:43630116-43636618:-|nuORF'] 101793 11506 SPIENIQRV True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 49.254 2 0.22239455881946155 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 41121 20777 HYNSDLNNLLF True PC9_epitope_Rep3 1348.6411646706 1348.64006993586 85.19 2 0.22237863769211577 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 47758 8201 IYQRDPLKL True NCI_RA007_Epitope_Rep4 1144.6604435631998 1144.65934993586 38.332 2 0.22237430535428845 0.00036105427849320016 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 132085 8745 VYIKHPVSL True PC9_epitope_Rep4 1054.61751612206 1054.61640993586 41.145 2 0.22236872035344868 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 21483 5467 ERQPGAASL True PC9_epitope_Rep5 927.4773938207899 927.47628993586 26.04 2 0.22236308584966233 0.00036105427849320016 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 129665 16405 VTIEDVQKL True PC9_epitope_Rep3 1043.58627556343 1043.5851699358602 68.239 2 0.22235412039753352 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 54309 21626 KYPSPFFVF True PC9_epitope_Rep2 1130.5800679841798 1130.5789699358602 88.66 2 0.22234024221784196 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 39958 13229 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5439899358599 55.751 2 0.2223357506038278 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 91363 6095 RMQKEITAL True NCI_RA007_Epitope_Rep4 1088.60121443492 1088.60010993586 30.059 2 0.22233421919123578 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 2275 18879 AEPLEIILHLP True H1975_Epitope_Rep2 1243.71762408615 1243.71652993586 78.377 2 0.22230942619370025 0.00036105427849320016 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 41350 16700 IALTDNALIAR True PC9_epitope_Rep2 1169.67682190333 1169.67572993586 69.485 2 0.22230021987514637 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7'] 45049 5978 IQNPTMINK True NCI_RA007_Epitope_Rep4 1057.55901526977 1057.5579099358602 29.615 2 0.22228509674943298 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 116831 14519 TYMGHTGAVW True PC9_epitope_Rep5 1121.4964150132098 1121.4953099358602 60.846 2 0.22228200983115884 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 87638 6107 QTYVGITEK True NCI_RA007_Epitope_Rep4 1037.5393253710097 1037.53822993586 30.104 2 0.22228043691713203 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 74156 13392 NHYNNIMAL True PC9_epitope_Rep6 1088.50731405008 1088.5062099358602 63.183 2 0.22227614445486418 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 37227 19606 GVVDPRAISVL True PC9_epitope_Rep2 1124.65535818276 1124.6542699358602 80.799 2 0.22226582915499557 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 35259 10179 GSLNWVPVTK True NCI_RA007_Epitope_Rep3 1099.6025943339098 1099.6014899358602 47.126 2 0.22226456407292125 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE'] 7698 9456 ASQELWLNH True NCI_RA007_Epitope_Rep4 1096.53015766964 1096.5290699358602 43.23 2 0.22225060850334158 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574', 'ZNF574|p.Q224Sfs*144|1|0.3|ENSG00000105732|chr19:42079275-42079275|C/-|frameshift_variant'] 88387 16965 QYNTYPIKL True PC9_epitope_Rep5 1138.60225998074 1138.60116993586 70.275 2 0.22224964965958968 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1'] 104252 11136 SSDPEEESVLY True H1975_Epitope_Rep3 1253.52994245577 1253.52884993586 47.93 2 0.22224518352411404 0.00036105427849320016 0.9438714419765777 ['ENSG00000025772|ENST00000372813|TOMM34'] 70992 7750 MEQLLSQGHQP True H1975_Epitope_Rep2 1266.6026709869 1266.6015699358602 34.764 2 0.2222369304457291 0.00036105427849320016 0.9438714419765777 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 47931 8426 IYYITGETK True NCI_RA007_Epitope_Rep2 1086.55972646242 1086.5586299358602 37.416 2 0.22221514061211134 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 64474 19128 LQVEDLDRL True PC9_epitope_Rep5 1099.5873381925899 1099.58624993586 78.61 2 0.222212096793434 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF', 'ENST00000479375.6_1_9:130556974-130569527:+|nuORF', 'ENST00000460181.5_1_9:130565203-130569527:+|nuORF'] 113245 18261 TQEDVRLIGL True PC9_epitope_Rep2 1142.62953735774 1142.62844993586 75.561 2 0.22220396288804295 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 136353 7281 YHDEADQSAL True PC9_epitope_Rep1 1147.47818166643 1147.47708993586 32.818 2 0.22218757847545806 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 119085 5517 VEHSDLSFSK True NCI_RA007_Epitope_Rep2 1147.5509526838698 1147.54930490379 26.075 3 0.22218619435015666 0.00036105427849320016 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 35451 7683 GTEFGGSIYQK True NCI_RA007_Epitope_Rep5 1185.56660274801 1185.56550993586 36.256 2 0.22217699508474864 0.00036105427849320016 0.9438714419765777 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000489906.5_1_5:133308464-133311792:-|nuORF', 'nc|ENSG00000165637|P45880-2|VDAC2', 'ENSG00000078668|ENST00000022615|VDAC3', 'nc|ENSG00000078668|Q9Y277-2|VDAC3', 'ENSG00000165637|ENST00000332211|VDAC2', 'nc|ENSG00000165637|P45880-1|VDAC2'] 48581 10769 KEIDYILST True H1975_Epitope_Rep2 1080.5702911461199 1080.56918993586 46.453 2 0.22217327860678673 0.00036105427849320016 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 29621 22897 FVLPELPSV True PC9_epitope_Rep1 999.56408356687 999.56298993586 92.871 2 0.2221660307230067 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 117126 18556 TYSPALNKMF True PC9_epitope_Rep1 1170.5743309807401 1170.5732299358601 76.165 2 0.22215434543213367 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 24160 18769 EYTDVLQKI True PC9_epitope_Rep3 1107.58119018299 1107.58008993586 77.416 2 0.2221508155421512 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 104246 9529 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4603699358602 41.661 2 0.22215018310393678 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 70119 20415 LYIVHPTMF True PC9_epitope_Rep5 1119.57868808519 1119.57758993586 83.561 2 0.22213182580554747 0.00036105427849320016 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 8303 16649 ATLKELTSL True PC9_epitope_Rep2 974.56481184286 974.56370993586 69.284 2 0.22212980599632667 0.00036105427849320016 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 110055 16233 THYDHVLIEL True PC9_epitope_Rep4 1238.6295373577398 1238.62844993586 70.381 2 0.22212686261202375 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 118664 13673 VEAQLQELQVK True PC9_epitope_Rep1 1283.7085159544297 1283.7074099358601 57.447 2 0.22211764338276177 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 40154 5631 HRDYETATL True PC9_epitope_Rep4 1104.51998690876 1104.5188899358602 28.457 2 0.22211693759794804 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 116996 21121 TYQDIFRDF True PC9_epitope_Rep3 1203.5560380643099 1203.5549499358601 86.525 2 0.22211663073791738 0.00036105427849320016 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000472860.1_1_3:195000059-195000408:-|nuORF'] 114885 5538 TTEERTQLY True H1975_Epitope_Rep2 1139.54586730343 1139.5447699358601 26.31 2 0.22211206625025193 0.00036105427849320016 0.9438714419765777 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13', 'ENST00000471302.2_1_1:231047214-231057243:-|nuORF'] 106374 6800 SVSQPIMVQR True NCI_RA007_Epitope_Rep4 1143.60702809135 1143.60592993586 32.781 2 0.2221088048458788 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1'] 71709 5281 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 25.374 2 0.22209709457542318 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 62470 12060 LLSNDEVTIK True PC9_epitope_Rep1 1130.6183039677 1130.61720993586 51.247 2 0.22206807376101845 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 73055 8451 NDLAVVDVR True H1975_Epitope_Rep1 999.53490869691 999.53380993586 37.435 2 0.22205752804742934 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 70105 15639 LYIVEPLKF True NCI_RA007_Epitope_Rep4 1120.6532329244399 1120.65212993586 67.931 2 0.22205618761916107 0.00036105427849320016 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 37943 7656 HEEMNYITA True H1975_Epitope_Rep2 1106.47025983502 1106.46916993586 34.402 2 0.22203717382948393 0.00036105427849320016 0.9438714419765777 ['ENST00000524546.5_1_8:42911603-42924800:+|nuORF', 'FNTA|p.Y166Sfs*6|1|0.25|ENSG00000168522|chr8:43069649-43069650|TA/-|frameshift_variant', 'ENST00000526755.5_1_8:42911676-42932640:+|nuORF', 'nc|ENSG00000168522|P49354-2|FNTA', 'ENSG00000168522|ENST00000302279|FNTA'] 54204 15966 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 70.475 2 0.22203456607949784 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 106020 12573 SVLNLVIVK True NCI_RA007_Epitope_Rep3 983.6379172134699 983.63682993586 56.695 2 0.22203029002380184 0.00036105427849320016 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 49250 18263 KGVDEVTIVNI True PC9_epitope_Rep2 1185.66050313285 1185.6594099358601 75.57 2 0.2220293805740776 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 14366 12799 DTEFPNFKY True H1975_Epitope_Rep3 1159.51858992643 1159.51748993586 54.448 2 0.2220239421024501 0.00036105427849320016 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1', 'RPA1|p.C503R|1|0.38|ENSG00000132383|chr17:1888807-1888807|T/C|missense_variant'] 41581 6876 IDEPLEGSEDR True NCI_RA007_Epitope_Rep2 1258.56772494682 1258.5666299358602 31.362 2 0.22201070604974452 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 117185 12766 TYTDVTPRQF True PC9_epitope_Rep2 1226.59315184902 1226.5920499358601 54.41 2 0.22200983209831177 0.00036105427849320016 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 136422 16294 YHFPDQQEL True PC9_epitope_Rep5 1175.52473793603 1175.52364993586 67.668 2 0.22199861559391862 0.00036105427849320016 0.9438714419765777 ['ENSG00000165490|ENST00000533655|DDIAS'] 30020 16633 FYHKYFNYL True PC9_epitope_Rep4 1293.61824439805 1293.6166049037902 71.946 3 0.22198825436056624 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 131920 14467 VYERELQTF True PC9_epitope_Rep3 1183.5873381925899 1183.58624993586 60.754 2 0.22198489188992274 0.00036105427849320016 0.9438714419765777 ['ENSG00000203791|ENST00000368836|EEF1AKMT2'] 116469 11044 TYAPAIHQI True PC9_epitope_Rep4 1012.5341804209202 1012.53308993586 50.256 2 0.2219794556195087 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant'] 43666 21253 IIMLEALERV True PC9_epitope_Rep2 1185.67913040245 1185.6780299358602 87.211 2 0.2219777907147561 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 67170 11325 LTDFIREEY True H1975_Epitope_Rep2 1184.57135377528 1184.5702499358601 48.61 2 0.2219628054678347 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 94447 21581 RYFLPPYTF True PC9_epitope_Rep5 1202.6124307416196 1202.61132993586 88.051 2 0.22196234203869677 0.00036105427849320016 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 94649 18107 RYLDWIKKI True PC9_epitope_Rep2 1233.7233781729299 1233.7217249037901 74.951 3 0.2219544113255658 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 14946 4273 DYNVTANSK True NCI_RA007_Epitope_Rep2 1010.4668887067401 1010.46578993586 21.26 2 0.22195170611597806 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA'] 60632 5376 LITEDVQGK True NCI_RA007_Epitope_Rep5 1001.5393253710098 1001.53822993586 27.368 2 0.2219511553178157 0.00036105427849320016 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF'] 54009 9678 KYLGQLHYL True NCI_RA007_Epitope_Rep4 1133.62332977849 1133.62222993586 44.075 2 0.2219502253084253 0.00036105427849320016 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 53991 11999 KYLDNPNAL True PC9_epitope_Rep1 1046.53965972418 1046.53856993586 51.016 2 0.22194547102444254 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 17359 6752 EHDTTEYKL True PC9_epitope_Rep3 1134.51931820242 1134.51766490379 30.994 3 0.2219358460760038 0.00036105427849320016 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 137192 6463 YLDYHM[Oxidation]EKY True H1975_Epitope_Rep1 1276.5434251557201 1276.5417749037902 29.922 3 0.22193225246486287 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 5745 13059 APDFVFYAPR True H1975_Epitope_Rep3 1181.5869442697697 1181.58584993586 55.471 2 0.22192795034536317 0.00036105427849320016 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR', 'ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'RDX|p.E461Kfs*3|1|0.1|ENSG00000137710|chr11:110233447-110233447|G/-|frameshift_variant', 'ENSG00000147065|ENST00000360270|MSN'] 91364 6184 RMQKEITAL True NCI_RA007_Epitope_Rep4 1088.60121443492 1088.60010993586 30.397 2 0.22192071800667382 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 104242 9320 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4608749679298 40.81 1 0.22191791404347613 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 26028 7827 FHDGSVHIV True PC9_epitope_Rep4 1009.49812926537 1009.49702993586 37.514 2 0.22191533851553577 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 43520 5852 IIDEVVNK True H1975_Epitope_Rep3 928.52294703088 928.52184993586 27.523 2 0.22191307925468715 0.00036105427849320016 0.9438714419765777 ['ENSG00000112208|ENST00000370693|BAG2', 'nc|ENSG00000112208|O95816-2|BAG2'] 1724 7262 AEGQRLFSA True H1975_Epitope_Rep3 977.4930438849299 977.49194993586 32.906 2 0.22191121776622028 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'ENST00000569800.5_1_16:69167425-69171817:+|nuORF'] 14994 12918 DYTYEELLNR True H1975_Epitope_Rep1 1314.6091958359798 1314.60808993586 54.764 2 0.22190964822104464 0.00036105427849320016 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 39980 11259 HQQSIPAVL True PC9_epitope_Rep6 991.5450794577898 991.5439899358599 54.316 2 0.22190619088587504 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 87468 11808 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep3 1318.5751192068199 1318.5740299358602 50.566 2 0.22188744187991405 0.00036105427849320016 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 135367 9887 YDGIILPGK True H1975_Epitope_Rep1 974.54368247546 974.54258993586 42.964 2 0.22187939151282401 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 53215 9364 KTDKTLVLL True NCI_RA007_Epitope_Rep2 1029.6433965167298 1029.6422899358602 41.033 2 0.22187907351958505 0.00036105427849320016 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 73976 6095 NHNSQVWRV True PC9_epitope_Rep4 1138.5631891334199 1138.56154490379 30.453 3 0.22187844463817574 0.00036105427849320016 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 91299 21083 RLYPWGVVEV True PC9_epitope_Rep1 1216.6604435631998 1216.65934993586 85.928 2 0.22186529085055257 0.00036105427849320016 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 26184 22038 FHSEIEDFLL True PC9_epitope_Rep5 1248.60265390356 1248.60154993586 89.796 2 0.22185592554837508 0.00036105427849320016 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 88248 16632 QYEQVKQLF True PC9_epitope_Rep5 1181.6080736371698 1181.6069699358602 68.981 2 0.22185290825743564 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1', 'CNOT1-GOT2|1|fusion'] 26784 10676 FLDSTGSRLDY True H1975_Epitope_Rep2 1272.59863115228 1272.5975299358602 46.089 2 0.2218459322483367 0.00036105427849320016 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 52174 8624 KMDDLNLHY True H1975_Epitope_Rep1 1147.53319444475 1147.53208993586 38.099 2 0.22183154742144312 0.00036105427849320016 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF', 'SPRYD3|p.N13K|1|0.38|ENSG00000167778|chr12:53077246-53077246|G/T|missense_variant'] 139374 5440 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 25.952 2 0.22183131938392686 0.00036105427849320016 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 35785 9924 GTVYEDLRY True H1975_Epitope_Rep1 1114.5294889632999 1114.52838993586 43.108 2 0.22182957462370254 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|494|14.5|0.62|4.54|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C'] 310 19377 AAIDWFDGK True PC9_epitope_Rep1 1021.4868958753299 1021.48578993586 79.343 2 0.22181296639014364 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 46245 8356 ITDSAGHILYS True H1975_Epitope_Rep1 1175.58225281215 1175.5811499358601 37.071 2 0.2218071658542296 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 89378 9264 REMEENFAVEA True H1975_Epitope_Rep2 1323.57651580871 1323.57540993586 40.591 2 0.22180563909806703 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 67361 7842 LTDRGVMSY True H1975_Epitope_Rep2 1040.49608066004 1040.49498993586 35.114 2 0.22179762943118372 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 26991 16859 FLLDPVKGERL True PC9_epitope_Rep4 1285.73942215989 1285.73776490379 72.828 3 0.22179366727802377 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 77293 19262 NYIVPDKQIF True PC9_epitope_Rep5 1235.6550238295897 1235.65392993586 79.132 2 0.22179016002107294 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 140544 13276 YYLNDLERI True NCI_RA007_Epitope_Rep4 1197.6029882567298 1197.60188993586 58.201 2 0.22178985254063058 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 114911 7859 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 35.175 2 0.2217894481814677 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 117050 12792 TYQQVQQTL True PC9_epitope_Rep1 1107.55603806431 1107.5549499358601 54.079 2 0.2217791194442587 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 39966 12645 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5439899358599 53.948 2 0.22177100884442333 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 112137 14135 TLVEAIKQV True PC9_epitope_Rep4 999.5964463243098 999.59534993586 62.273 2 0.22176250499070502 0.00036105427849320016 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'MOV10|p.V542A|1|0.11|ENSG00000155363|chr1:112695420-112695420|T/C|missense_variant', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 83084 18519 PYM[Oxidation]DSPQSIGF True PC9_epitope_Rep4 1256.53833977528 1256.53724993586 79.306 2 0.22175915927529538 0.00036105427849320016 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 84710 15643 QHFEFEYQT True PC9_epitope_Rep1 1227.5196525555898 1227.5185499358602 64.992 2 0.2217441405702419 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 23573 19762 EYDLIVHQL True PC9_epitope_Rep1 1128.58152453616 1128.5804299358601 80.841 2 0.22174185277655545 0.00036105427849320016 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 48855 11931 KESEVFYELA True H1975_Epitope_Rep2 1213.58666948625 1213.5855699358601 50.971 2 0.22174041643454345 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 53374 6425 KTYGEIFEK True NCI_RA007_Epitope_Rep5 1113.57062549929 1113.5695299358601 31.383 2 0.22173733770960774 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 86753 19928 QRLINLVGESL True PC9_epitope_Rep2 1240.7139356880398 1240.71282993586 82.051 2 0.2217298819334493 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 74146 9963 NHYNNIM[Oxidation]AL True PC9_epitope_Rep2 1104.50222905008 1104.50112993586 43.653 2 0.2217288823813514 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 23574 19405 EYDLIVHQL True PC9_epitope_Rep2 1128.58152453616 1128.5804299358601 80.019 2 0.22172565361813432 0.00036105427849320016 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 21354 20611 ERLLGNFSL True PC9_epitope_Rep1 1047.57129420563 1047.57018993586 84.097 2 0.2217214671268579 0.00036105427849320016 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 54802 19608 LAFEEEFGRV True PC9_epitope_Rep2 1195.5873381925899 1195.58624993586 80.807 2 0.2217212977491536 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 39674 10984 HPTEDLVVSA True PC9_epitope_Rep3 1066.5294889632999 1066.52838993586 47.235 2 0.22171826841327258 0.00036105427849320016 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 116827 14604 TYMGHTGAVW True PC9_epitope_Rep1 1121.4964150132098 1121.4953099358602 60.998 2 0.22171786491365716 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 8102 5623 ATELTHEDY True H1975_Epitope_Rep3 1077.46146897313 1077.4603699358602 26.666 2 0.22171770673064176 0.00036105427849320016 0.9438714419765777 ['ENSG00000165916|ENST00000298852|PSMC3'] 53449 11117 KVIDPATATSV True PC9_epitope_Rep3 1100.607739284 1100.60664993586 47.759 2 0.22171421079700043 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 70144 10135 LYLDEAHSI True NCI_RA007_Epitope_Rep3 1059.52367530687 1059.52256993586 46.955 2 0.22171125828146362 0.00036105427849320016 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'SPTLC2|p.A351S|1|0.2|ENSG00000100596|chr14:77555425-77555425|C/A|missense_variant'] 65074 10165 LSDLGRLSY True H1975_Epitope_Rep2 1022.53965972418 1022.53856993586 44.101 2 0.22169404984999175 0.00036105427849320016 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 114227 7800 TRVSQINTL True PC9_epitope_Rep6 1030.5771078620598 1030.5760099358602 39.39 2 0.22169177210004898 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 105171 5429 STMSTNGIPR True NCI_RA007_Epitope_Rep5 1062.51279335334 1062.5116899358602 27.57 2 0.22169096466847676 0.00036105427849320016 0.9438714419765777 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 30024 19093 FYHKYFNYL True PC9_epitope_Rep5 1293.61824439805 1293.6171499358602 78.471 2 0.22166592960636117 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 87804 9028 QVIGVVLQK True NCI_RA007_Epitope_Rep1 982.6175161220598 982.61640993586 39.12 2 0.22166161566456213 0.00036105427849320016 0.9438714419765777 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 77103 17932 NYAQVFNKL True PC9_epitope_Rep3 1095.57129420563 1095.57018993586 74.179 2 0.22164070923247672 0.00036105427849320016 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 91632 9804 RPFEDQTSL True PC9_epitope_Rep6 1091.52473793603 1091.52364993586 48.165 2 0.22163575926277804 0.00036105427849320016 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 93956 12080 RVLQALEGLK True PC9_epitope_Rep4 1125.6869926642098 1125.6853349037901 54.27 3 0.22162005666747614 0.00036105427849320016 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 77468 21139 NYPETLGRLLI True PC9_epitope_Rep1 1287.7186867153098 1287.7175899358601 86.141 2 0.2216183985238815 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 120516 22401 VFYPYPQYF True PC9_epitope_Rep1 1222.5698972232997 1222.5688099358601 90.985 2 0.22161487521172776 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 22199 13737 ETDEKDFYLYY True H1975_Epitope_Rep3 1484.6347418774799 1484.6336499358601 58.137 2 0.22160792445666933 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 106155 17374 SVPDPELIKTV True PC9_epitope_Rep5 1196.66525416012 1196.66414993586 71.829 2 0.2216023580198293 0.00036105427849320016 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 40456 9872 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46506993586 42.96 2 0.22159811263627816 0.00036105427849320016 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 57531 16640 LEKSFYQF True PC9_epitope_Rep2 1060.5229470308798 1060.52184993586 69.251 2 0.22159612247939606 0.00036105427849320016 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 43039 12607 IGGIGTVPVGR True PC9_epitope_Rep1 1024.6029286870798 1024.60182993586 53.361 2 0.2215705246240953 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 96608 5958 SEM[Oxidation]EVQDAELK True NCI_RA007_Epitope_Rep1 1293.5758474828096 1293.5747499358602 27.222 2 0.22156331992750242 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF', 'ENST00000418595.1_1_6:112937907-112938114:-|nuORF'] 10058 8671 AYVHMVTHF True NCI_RA007_Epitope_Rep5 1103.52223583823 1103.52112993586 40.023 2 0.2215593712024045 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 27531 10041 FPGQLNADLR True H1975_Epitope_Rep3 1129.5880068989297 1129.5869099358601 43.658 2 0.22155892532543933 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'TUBB6|p.R241C|1|0.58|ENSG00000176014|chr18:12325510-12325510|C/T|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 35754 5400 GTVDPQELQK True NCI_RA007_Epitope_Rep4 1113.56660274801 1113.56550993586 27.341 2 0.22155285516524403 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000472930.6_1_7:87835795-87839460:-|nuORF'] 86672 11507 QRIAEENIM True PC9_epitope_Rep1 1102.54409348162 1102.54298993586 49.142 2 0.2215259903049689 0.00036105427849320016 0.9438714419765777 ['ENSG00000071859|ENST00000393600|FAM50A', 'ENST00000481619.5_1_X:153672624-153677371:+|nuORF'] 33537 18754 GLIEILKKV True PC9_epitope_Rep4 1011.6692173417499 1011.66812993586 80.219 2 0.22150452154287673 0.00036105427849320016 0.9438714419765777 ['ENSG00000105185|ENST00000590247|PDCD5'] 140225 12047 YWMHVQNTF True NCI_RA007_Epitope_Rep3 1224.53861417836 1224.53750993586 54.509 2 0.22150285194159156 0.00036105427849320016 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 54020 14265 KYLNSVQYI True PC9_epitope_Rep4 1126.60225998074 1126.60116993586 62.774 2 0.22150230244871066 0.00036105427849320016 0.9438714419765777 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 61700 21136 LLIDELNKL True PC9_epitope_Rep5 1069.63831113629 1069.63720993586 86.359 2 0.22149866198188994 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 69206 11101 LVNELTEFAK True H1975_Epitope_Rep1 1162.6233893481399 1162.6222899358602 47.664 2 0.22149768194842648 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 58390 14298 LEVNLQAMK True PC9_epitope_Rep2 1044.5637662970398 1044.5626699358602 60.262 2 0.22149462844760126 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 100326 10659 SLMHSFILK True NCI_RA007_Epitope_Rep4 1074.5895871220598 1074.58848993586 47.848 2 0.22148958748654224 0.00036105427849320016 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 137096 10346 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.53280993586 44.744 2 0.22148923858570208 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 39372 11362 HLVDEPQNLIK True PC9_epitope_Rep4 1304.7088503076 1304.7077499358602 51.477 2 0.22148811279002575 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 2958 18114 AFIEKHWTF True PC9_epitope_Rep1 1177.59202965021 1177.59092993586 74.468 2 0.2214861061012997 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 140543 12968 YYLNDLERI True NCI_RA007_Epitope_Rep3 1197.6029882567298 1197.60188993586 58.283 2 0.2214820769142359 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 135473 7970 YEDATKITV True H1975_Epitope_Rep2 1038.5233409537 1038.5222499358601 35.603 2 0.22148059804992237 0.00036105427849320016 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 25147 8526 FDQLLAEEK True H1975_Epitope_Rep3 1091.5498900547097 1091.5487899358602 37.781 2 0.22147811415615964 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 14386 17056 DTEPPPLLVY True H1975_Epitope_Rep3 1142.5859412102598 1142.5848499358601 71.209 2 0.22147494135361112 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 106468 18118 SVVESVFKL True PC9_epitope_Rep6 1006.5698972232999 1006.56880993586 82.326 2 0.22147492665132265 0.00036105427849320016 0.9438714419765777 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 77100 12117 NYAFLHRTL True PC9_epitope_Rep4 1133.59817765981 1133.59654490379 54.416 3 0.22147460974142663 0.00036105427849320016 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 105644 18720 SVFKDFYEL True PC9_epitope_Rep6 1146.55972646242 1146.5586299358602 84.648 2 0.22145559572485257 0.00036105427849320016 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB'] 91292 18340 RLYDGLFKVI True PC9_epitope_Rep6 1222.70739375562 1222.70628993586 83.187 2 0.22145177209264655 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 112595 6347 TPAQYDASELK True NCI_RA007_Epitope_Rep5 1221.58773211541 1221.5866299358602 31.088 2 0.22145049290773525 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 120522 22325 VFYPYPQYF True PC9_epitope_Rep5 1222.5698972232997 1222.5688099358601 90.882 2 0.22144928930877894 0.00036105427849320016 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 88010 6787 QVSPEAGVQKV True PC9_epitope_Rep2 1140.6138872935999 1140.61278993586 31.513 2 0.2214422250744508 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 119115 5705 VEILANDQGNR True H1975_Epitope_Rep3 1227.6207635791898 1227.6196699358602 26.975 2 0.22143949308409 0.00036105427849320016 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 96101 6843 SEDPTDDSRLP True H1975_Epitope_Rep1 1230.53642481854 1230.53532993586 31.366 2 0.2214346935573063 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 17985 6031 EIGQSVDEVEK True H1975_Epitope_Rep3 1231.5932114186696 1231.5921099358602 28.213 2 0.22143297111293145 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 51911 7066 KKSDFQVNL True NCI_RA007_Epitope_Rep3 1077.5818588893299 1077.5807699358602 34.91 2 0.22142942627246398 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 93957 14796 RVLQALEGLK True PC9_epitope_Rep5 1125.6869926642098 1125.6858899358601 61.913 2 0.2214192204736758 0.00036105427849320016 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 96961 9920 SEVEVIHVP True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52766993586 46.103 2 0.22141325016824528 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 89374 8973 REMEENFAVEA True H1975_Epitope_Rep1 1323.57651580871 1323.57540993586 39.419 2 0.2214062381523458 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 40915 15861 HVVDFFNRV True PC9_epitope_Rep2 1131.58252759567 1131.5814299358601 66.268 2 0.2213999230680215 0.00036105427849320016 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A'] 94539 22737 RYILEPFFI True PC9_epitope_Rep5 1196.65938093404 1196.65828993586 92.463 2 0.22139852384872982 0.00036105427849320016 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 116764 16856 TYLEKFQNL True PC9_epitope_Rep4 1154.5971746002997 1154.5960699358602 72.817 2 0.22139574060416944 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 29872 12698 FVYDEPGHAV True PC9_epitope_Rep1 1132.5189242795998 1132.5178299358602 53.715 2 0.22138466085981684 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 56287 7352 LDQPM[Oxidation]TEIVSR True NCI_RA007_Epitope_Rep2 1303.64420182615 1303.6431099358601 33.22 2 0.22138240059333844 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 10013 15133 AYTLLLHTW True NCI_RA007_Epitope_Rep4 1116.59678067748 1116.59627496793 65.781 1 0.22137836564484253 0.00036105427849320016 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 31850 6155 GEPPKDYRIP True H1975_Epitope_Rep2 1170.6033226098998 1170.60166490379 28.647 3 0.22137359412302832 0.00036105427849320016 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 77528 8881 NYQNVVHKL True PC9_epitope_Rep1 1113.59309227937 1113.59198993586 38.999 2 0.22137245977104328 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4', 'ZMYM4|p.P896Lfs*7|1|0.34|ENSG00000146463|chr1:35392308-35392308|C/-|frameshift_variant'] 106173 11806 SVPEFPLSPPK True NCI_RA007_Epitope_Rep5 1196.6441247927198 1196.64302993586 52.069 2 0.221328662380575 0.00036105427849320016 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 27928 19460 FQNPFRSEL True PC9_epitope_Rep5 1136.56145779792 1136.56036993586 79.906 2 0.2213208170082472 0.00036105427849320016 0.9438714419765777 ['ENSG00000073050|ENST00000262887|XRCC1', 'XRCC1|p.D487Tfs*6|2|0.14|ENSG00000073050|chr19:43546074-43546074|C/-|frameshift_variant'] 53964 19689 KYITQGQLLQF True PC9_epitope_Rep2 1337.73433677945 1337.7332299358602 81.12 2 0.22130706438034006 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 98033 9902 [Acetylation]-SHTILLVQPTK True H1975_Epitope_Rep1 1277.7343370957499 1277.7332299358602 43.024 2 0.22130282835158033 0.00036105427849320016 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 17770 22061 EHVFWVVSL True PC9_epitope_Rep3 1114.5811306133398 1114.58002993586 90.155 2 0.22129475467460333 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 3798 12712 AGVLAHLEEER True PC9_epitope_Rep3 1222.6305999868998 1222.6289549037901 53.919 3 0.22129381607908297 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 94977 13528 RYQDAIRVF True PC9_epitope_Rep2 1166.6196413803798 1166.61854993586 57.327 2 0.221287430728006 0.00036105427849320016 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 102019 5219 SPPGQVTEAVK True NCI_RA007_Epitope_Rep2 1111.5873381925899 1111.58624993586 24.921 2 0.2212685874267252 0.00036105427849320016 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 8808 21140 AVFPDDMPTL True PC9_epitope_Rep4 1104.51614739828 1104.5150499358601 89.478 2 0.22126437345544414 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 47676 19086 IYPSKWIARL True PC9_epitope_Rep5 1245.7233781729299 1245.7217249037901 78.444 3 0.22126195893684653 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'ENST00000569930.1_1_16:2133412-2138608:+|nuORF'] 15129 5771 EAEIATYR True NCI_RA007_Epitope_Rep2 951.46616043075 951.46506993586 27.065 2 0.22125007890371048 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENST00000513396.1_1_4:136292387-136292531:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 1886 5240 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5971499358602 25.224 2 0.22124833429361113 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 54429 18569 KYTEITATYF True PC9_epitope_Rep1 1235.6074049308297 1235.60630993586 76.214 2 0.22124318767484802 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 3394 10276 [Acetylation]-AGITTIEAVKR True NCI_RA007_Epitope_Rep1 1199.68738690333 1199.68628993586 43.979 2 0.2212418525017519 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 8074 8738 ATEESDLAQQY True H1975_Epitope_Rep2 1253.54117584581 1253.5400699358602 38.572 2 0.22123116357275338 0.00036105427849320016 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 60654 12470 LITPAVVSER True PC9_epitope_Rep2 1083.62880908175 1083.6277099358601 53.276 2 0.22122825562922538 0.00036105427849320016 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 61197 10088 LLDPAQRNLY True H1975_Epitope_Rep2 1201.64552177505 1201.6444299358602 43.796 2 0.22122825143214722 0.00036105427849320016 0.9438714419765777 ['ENSG00000198028|ENST00000301480|ZNF560', 'ENSG00000178150|ENST00000595607|ZNF114'] 85492 19876 QLIDKVWQL True PC9_epitope_Rep4 1141.64954452633 1141.64844993586 84.585 2 0.22122004673236756 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 25316 12902 FEELNM[Oxidation]DLFR True H1975_Epitope_Rep1 1328.6070880414397 1328.6059899358602 54.7 2 0.221217223990648 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 97479 20312 SGLLKVWQV True PC9_epitope_Rep3 1028.6018660579198 1028.6007699358602 83.378 2 0.2212145199775968 0.00036105427849320016 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 131719 22355 VWVPFIYSF True NCI_RA007_Epitope_Rep5 1156.59571804832 1156.5946299358602 93.149 2 0.2212135400001549 0.00036105427849320016 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 37534 21359 GYLPNQLFRTF True PC9_epitope_Rep5 1354.70337100434 1354.7022699358602 87.216 2 0.22119691365029293 0.00036105427849320016 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 53903 20383 KYIENLDNITF True PC9_epitope_Rep5 1368.6925315371197 1368.69142993586 83.438 2 0.22119512196630975 0.00036105427849320016 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 4794 10787 ALELDSNLYR True H1975_Epitope_Rep3 1192.60880191316 1192.6077099358602 46.572 2 0.2211854432476757 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 65402 9595 LSERYAELY True H1975_Epitope_Rep3 1142.5607890915799 1142.5596899358602 41.92 2 0.22117171103653596 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 47697 19989 IYPVDLGDKF True PC9_epitope_Rep3 1165.6019256275697 1165.60082993586 82.134 2 0.22116642527766284 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-3|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H'] 53407 18585 KVFDPVPVGV True PC9_epitope_Rep5 1055.60153170475 1055.6004299358601 76.512 2 0.22116607496754706 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 83082 20990 PYMDSPQSIGF True PC9_epitope_Rep5 1240.5434247752798 1240.5423299358602 85.8 2 0.2211640759034421 0.00036105427849320016 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 7132 11787 AQYEHDLEV True PC9_epitope_Rep3 1102.4931034545798 1102.49200993586 50.356 2 0.22116238542838715 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 76083 8558 NRMLAQQAV True PC9_epitope_Rep1 1029.53894853153 1029.53784993586 37.756 2 0.2211612349178588 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 77545 22116 NYSGAAEYLYF True PC9_epitope_Rep1 1296.56626839484 1296.56516993586 89.881 2 0.2211538782446054 0.00036105427849320016 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 95874 7333 SDQDYILK True H1975_Epitope_Rep3 980.4814761417199 980.48036993586 33.182 2 0.22115077934126778 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000550166.1_1_12:56500490-56500880:+|nuORF'] 63211 3612 LNVTEQEKIDK True NCI_RA007_Epitope_Rep1 1315.69834519355 1315.69669490379 17.993 3 0.2211467671752147 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 109941 9053 THSDIQVKL True PC9_epitope_Rep5 1039.56620882519 1039.5651099358602 39.767 2 0.22113426095113892 0.00036105427849320016 0.9438714419765777 ['ENSG00000105223|ENST00000409735|PLD3', 'EGLN2-PLD3|1|fusion'] 65262 8730 LSEGVTISYK True NCI_RA007_Epitope_Rep1 1095.58119018299 1095.58008993586 37.959 2 0.22112496272917062 0.00036105427849320016 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 116666 15779 TYIPVPAKI True PC9_epitope_Rep4 1000.5957180483199 1000.59462993586 68.619 2 0.22112394848081884 0.00036105427849320016 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 11359 11024 DFEQPLAISR True H1975_Epitope_Rep1 1174.59823722946 1174.5971499358602 47.364 2 0.2211223556667983 0.00036105427849320016 0.9438714419765777 ['ENST00000477757.5_1_10:97028616-97050708:-|nuORF', 'PDLIM1|p.V196Ffs*11|1|0.25|ENSG00000107438|chr10:95247314-95247314|C/-|frameshift_variant', 'ENSG00000107438|ENST00000329399|PDLIM1'] 12233 14021 DIQLTQSPSF True NCI_RA007_Epitope_Rep4 1134.55570371114 1134.55460993586 61.213 2 0.22111732520904534 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000241755|A0A0C4DH69|IGKV1-9'] 24044 15646 EYQDLLNVK True PC9_epitope_Rep5 1120.5764391557198 1120.57534993586 65.194 2 0.22110529127662182 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 89016 10297 REEDPYMDTTL True H1975_Epitope_Rep2 1368.5867461392397 1368.5856499358601 44.613 2 0.2211042769695357 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 115288 13868 TVDNVQPLLY True H1975_Epitope_Rep3 1160.607739284 1160.60664993586 58.652 2 0.2210782426611915 0.00036105427849320016 0.9438714419765777 ['ENSG00000145332|ENST00000273963|KLHL8'] 95095 18475 RYSVFFQSL True PC9_epitope_Rep6 1145.58694426977 1145.58584993586 83.705 2 0.22107704349232124 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6', 'ENST00000497315.5_1_3:64004227-64005057:-|nuORF'] 34940 8422 GQWKKGFVL True NCI_RA007_Epitope_Rep3 1061.6022004110898 1061.6011099358602 40.217 2 0.22106808717849333 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 2366 10097 AEQFKLIQA True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 43.832 2 0.22106490072268284 0.00036105427849320016 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 109718 16542 THFQLAYRL True PC9_epitope_Rep5 1147.6138277239497 1147.61218490379 68.63 3 0.2210631140089686 0.00036105427849320016 0.9438714419765777 ['ENSG00000106144|ENST00000310447|CASP2', 'nc|ENSG00000106144|P42575-2|CASP2', 'ENST00000493642.5_1_7:142986735-143000877:+|nuORF'] 130771 4870 VVEASEAAYK True NCI_RA007_Epitope_Rep2 1065.53423999057 1065.5331499358601 23.566 2 0.22105986696758828 0.00036105427849320016 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 94737 18718 RYLMDPDTF True PC9_epitope_Rep2 1156.52229540788 1156.52118993586 77.373 2 0.22104017987167326 0.00036105427849320016 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 102454 10564 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep3 1225.56488887629 1225.56378993586 45.701 2 0.2210333711840315 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 35389 9599 GTDDGRLLEY True H1975_Epitope_Rep1 1137.5302172392899 1137.52912993586 41.848 2 0.22102691009675215 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 131704 17983 VWSDVTPLTF True NCI_RA007_Epitope_Rep4 1163.58627556343 1163.5851699358602 77.812 2 0.22102534398886622 0.00036105427849320016 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 26148 18834 FHNELLTQL True PC9_epitope_Rep2 1113.5818588893299 1113.5807699358602 77.813 2 0.22102206331528684 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 15093 8674 EADEYLDKY True H1975_Epitope_Rep3 1144.49243474824 1144.4913299358602 38.363 2 0.22101989881555825 0.00036105427849320016 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 26236 16428 FHYEADGANVL True PC9_epitope_Rep5 1234.5618517207397 1234.56074993586 68.19 2 0.22100470461610916 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 10061 13826 AYVHMVTHF True PC9_epitope_Rep1 1103.52223583823 1103.52112993586 58.024 2 0.22099956268110998 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 135553 6220 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 28.893 2 0.22098960999794418 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 14934 12665 DYMKTTSNF True PC9_epitope_Rep1 1105.47501086229 1105.47390993586 53.587 2 0.22098949839663362 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 86569 16358 QRAWTVEQL True PC9_epitope_Rep5 1129.5880068989297 1129.5869099358601 67.918 2 0.22095949675495488 0.00036105427849320016 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 3388 12833 [Acetylation]-AGITTIEAVK True NCI_RA007_Epitope_Rep1 1043.58627587973 1043.5851699358602 53.907 2 0.22095081839031558 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 34934 18940 GQWIAETGV True PC9_epitope_Rep5 959.4712458111899 959.4706949679301 77.876 1 0.22094975785238516 0.00036105427849320016 0.9438714419765777 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 51957 7991 KKVYASFAL True NCI_RA007_Epitope_Rep3 1025.5909670210497 1025.5898699358602 38.53 2 0.22094554967532218 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 28998 19892 FTIFRTISV True PC9_epitope_Rep4 1082.6124307416198 1082.61132993586 84.647 2 0.2209410254684045 0.00036105427849320016 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 74140 13560 NHYNMQYAL True PC9_epitope_Rep2 1152.50222866964 1152.50112993586 57.45 2 0.22094091989989353 0.00036105427849320016 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2'] 83034 16515 PYLDKFFTL True NCI_RA007_Epitope_Rep3 1142.6011973515801 1142.60010993586 72.76 2 0.2209336010707909 0.00036105427849320016 0.9438714419765777 ['ENSG00000130158|ENST00000294618|DOCK6'] 7147 11123 AQYLINARL True NCI_RA007_Epitope_Rep5 1060.60292868708 1060.60182993586 49.421 2 0.22092710277588357 0.00036105427849320016 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 45024 16407 IQLVEEELDR True PC9_epitope_Rep3 1242.6455813446998 1242.64448993586 68.247 2 0.22092472901197766 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 135569 6361 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 29.458 2 0.22091104247171142 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 89728 10450 REYQELMSV True NCI_RA007_Epitope_Rep2 1153.54375912845 1153.5426699358602 45.242 2 0.22086955725778806 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 76709 12789 NTPEYMEKI True PC9_epitope_Rep1 1123.52196105471 1123.5208699358602 54.067 2 0.2208548921386502 0.00036105427849320016 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 96048 9449 SEAPKSWMV True H1975_Epitope_Rep3 1033.49026700361 1033.4891699358602 41.349 2 0.22084759614899147 0.00036105427849320016 0.9438714419765777 ['ENSG00000154760|ENST00000285013|SLFN13'] 139202 18462 YSVDRLYEL True PC9_epitope_Rep4 1156.5764391557198 1156.57534993586 79.084 2 0.220841398346774 0.00036105427849320016 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 28887 13179 FTDVNSILRY True H1975_Epitope_Rep3 1226.62953735774 1226.62844993586 55.944 2 0.22083290474430575 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 24049 6468 EYQELM[Oxidation]NVK True NCI_RA007_Epitope_Rep2 1168.5434251557197 1168.5423299358602 29.767 2 0.2208298156466931 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 124271 7019 VLDEADEM[Oxidation]LSR True H1975_Epitope_Rep1 1292.59183190012 1292.59072993586 32.034 2 0.2208218170611271 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 73771 18032 NHDFQALAL True PC9_epitope_Rep1 1027.50869394907 1027.50758993586 74.152 2 0.2208133969109908 0.00036105427849320016 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 41845 12140 IDTIEIITDR True H1975_Epitope_Rep1 1187.63976768827 1187.6386699358602 51.713 2 0.22081055847331155 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 86682 17593 QRIDEFEAL True PC9_epitope_Rep5 1119.5560380643099 1119.5549499358601 72.68 2 0.2208015837280259 0.00036105427849320016 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 109790 5925 THISSQNSEL True PC9_epitope_Rep5 1114.52546621202 1114.52436993586 27.785 2 0.2207996647889157 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 3644 6674 AGQDGSVVQFK True H1975_Epitope_Rep3 1134.56693710118 1134.5658499358601 30.626 2 0.22079687401164916 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2', 'ENSG00000177688|ENST00000326669|SUMO4', 'ENSG00000184900|ENST00000332859|SUMO3', 'nc|ENSG00000184900|P55854-2|SUMO3', 'ENST00000466861.1_1_21:46233737-46238015:-|nuORF'] 114887 8384 TTEESLRNYY True H1975_Epitope_Rep1 1274.5778957077 1274.57678993586 37.177 2 0.22079599467068986 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 79009 15661 PFLQASPHF True PC9_epitope_Rep6 1042.5236157372199 1042.5225099358602 72.446 2 0.22079342756431913 0.00036105427849320016 0.9438714419765777 ['ENSG00000147689|ENST00000690554|FAM83A'] 38242 14142 HEYPWILSA True H1975_Epitope_Rep1 1114.54474510462 1114.54364993586 59.569 2 0.22078693848214154 0.00036105427849320016 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 60234 10033 LIDQDARDLY True H1975_Epitope_Rep2 1220.60371653272 1220.60260993586 43.583 2 0.2207678116658642 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion'] 17503 21780 EHIGIGLLSL True PC9_epitope_Rep5 1050.60734536118 1050.6062499358602 88.808 2 0.22076287053663612 0.00036105427849320016 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 23969 12346 EYPDRIMNTF True NCI_RA007_Epitope_Rep5 1284.5808729131597 1284.5797699358602 54.136 2 0.22075510726894715 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 97065 7388 SEYLRYEDT True H1975_Epitope_Rep2 1174.51423282198 1174.5131299358602 33.359 2 0.22074986206044153 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 31261 6512 [Acetylation]-GDREQLLQR True NCI_RA007_Epitope_Rep5 1155.5996345280898 1155.5985299358601 31.714 2 0.22074485677904515 0.00036105427849320016 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH'] 54346 9327 KYQEVTNNL True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 40.816 2 0.22074357621154994 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 53906 19968 KYIESPVLF True PC9_epitope_Rep1 1094.60119735158 1094.60010993586 81.631 2 0.2207404983942973 0.00036105427849320016 0.9438714419765777 ['ENSG00000100304|ENST00000216129|TTLL12'] 76299 11038 NSDVVEQIY True H1975_Epitope_Rep1 1065.49785448185 1065.4967499358602 47.42 2 0.22073660147351792 0.00036105427849320016 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 24191 21341 EYTRALFLL True PC9_epitope_Rep5 1124.62299542532 1124.62188993586 87.147 2 0.22073658518739872 0.00036105427849320016 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2'] 72297 4321 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep3 1081.43862573401 1081.43752993586 21.737 2 0.2207259856747614 0.00036105427849320016 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 75943 20707 NRFNYPFEL True PC9_epitope_Rep1 1198.5771078620598 1198.5760099358602 84.476 2 0.2207141571784361 0.00036105427849320016 0.9438714419765777 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 96637 7003 SENEYIMKA True H1975_Epitope_Rep2 1083.4906609264299 1083.4895699358601 31.86 2 0.2207113118165569 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 140345 8000 YYEHVKARF True PC9_epitope_Rep1 1211.60874234351 1211.60710490379 35.593 3 0.22070600518407738 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 61552 15094 LLGINVTDFTR True H1975_Epitope_Rep1 1247.68738658703 1247.68628993586 63.312 2 0.2207059772947752 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 59372 11969 LGLDYEER True PC9_epitope_Rep3 993.4767251144499 993.47562993586 51.062 2 0.22070417246752272 0.00036105427849320016 0.9438714419765777 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2', 'ENST00000544888.5_1_12:7077022-7079603:-|nuORF'] 8580 11198 AVAEEVNAILK True NCI_RA007_Epitope_Rep4 1155.6499384491499 1155.6488499358602 49.96 2 0.22070319392951898 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 75207 9339 NPDIFSPGVR True H1975_Epitope_Rep1 1100.5614577979197 1100.56036993586 40.83 2 0.22070309547388708 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 114153 6192 TRSQEQEVL True PC9_epitope_Rep5 1088.5462016565998 1088.5451099358602 28.801 2 0.22069714975365415 0.00036105427849320016 0.9438714419765777 ['ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1'] 24202 14421 EYVEKFYRI True PC9_epitope_Rep2 1245.6393737654498 1245.63826993586 60.74 2 0.2206928846658418 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 71311 12001 MHFESGSTL True PC9_epitope_Rep1 1007.43823143075 1007.43712993586 51.024 2 0.22069123564526325 0.00036105427849320016 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 11383 6947 DFHVDEQTTVK True NCI_RA007_Epitope_Rep1 1317.62009487285 1317.61898993586 31.026 2 0.22068257955217221 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 28951 9017 FTEQYNEQY True H1975_Epitope_Rep2 1220.4985827578398 1220.49807496793 39.635 1 0.22066383170195772 0.00036105427849320016 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 35248 4406 GSLASVYHK True NCI_RA007_Epitope_Rep4 960.50288029264 960.50178993586 23.303 2 0.22066185303259753 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000588116.1_1_17:33977635-33977996:+|nuORF'] 32315 10250 GFVTFDDHD True NCI_RA007_Epitope_Rep4 1051.42468954159 1051.42358993586 46.281 2 0.22065783587820328 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 40980 7430 HYAHLIKTF True NCI_RA007_Epitope_Rep4 1128.6080140675201 1128.60637490379 35.224 3 0.2206563738536317 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1', 'ENST00000495574.1_1_10:129046289-129055694:+|nuORF', 'ENST00000484400.5_1_10:129046280-129142589:+|nuORF'] 116686 18503 TYISWKEEL True PC9_epitope_Rep2 1167.58119018299 1167.58008993586 76.508 2 0.2206497808378 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 83356 11411 QAQEVFFLK True NCI_RA007_Epitope_Rep3 1108.59169529704 1108.5905899358602 52.011 2 0.22063201879770866 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 26663 20197 FLASESLIKQI True PC9_epitope_Rep3 1247.71253870571 1247.7114499358602 82.946 2 0.22063013319664038 0.00036105427849320016 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 24750 16465 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.4960299358602 71.301 2 0.22062792582091387 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 11933 10225 DHSNLIRSL True PC9_epitope_Rep4 1053.5567067706502 1053.55560993586 47.008 2 0.22061983701995655 0.00036105427849320016 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2'] 28266 12360 FRVKYETEL True PC9_epitope_Rep2 1183.62372370131 1183.62262993586 52.852 2 0.22060891339013472 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 95370 15409 SAIDRIFTL True H1975_Epitope_Rep2 1034.5760452329 1034.57494993586 64.429 2 0.2206049999535586 0.00036105427849320016 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3'] 27565 9275 FPM[Oxidation]PGFDEH True H1975_Epitope_Rep1 1091.43823181119 1091.4371299358602 40.588 2 0.22059739790856775 0.00036105427849320016 0.9438714419765777 ['ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF', 'ENST00000557433.5_1_12:57625333-57628141:+|nuORF', 'nc|ENSG00000182199|P34897-3|SHMT2', 'nc|ENSG00000182199|P34897-2|SHMT2', 'ENSG00000182199|ENST00000328923|SHMT2', 'ENST00000556825.5_1_12:57623475-57628141:+|nuORF', 'ENST00000557348.5_1_12:57623887-57628141:+|nuORF', 'ENST00000554467.5_1_12:57627991-57628141:+|nuORF'] 28269 11626 FRVKYETEL True PC9_epitope_Rep4 1183.62372370131 1183.62262993586 52.477 2 0.2205899465126878 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 129197 10965 VTDHLGVVYY True H1975_Epitope_Rep1 1164.58152453616 1164.5804299358601 47.141 2 0.22058557484903743 0.00036105427849320016 0.9438714419765777 ['ENST00000473051.1_1_10:74095570-74096546:-|nuORF', 'ENSG00000148719|ENST00000444643|DNAJB12', 'nc|ENSG00000148719|Q9NXW2-2|DNAJB12'] 114850 9784 TTDGKLPEV True PC9_epitope_Rep1 958.4971262058599 958.49602993586 42.496 2 0.22058208362290097 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 40917 15159 HVVDFFNRV True PC9_epitope_Rep4 1131.58252759567 1131.5814299358601 66.236 2 0.22057043738604704 0.00036105427849320016 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A'] 65401 9795 LSERYAELY True H1975_Epitope_Rep2 1142.5607890915799 1142.5596899358602 42.665 2 0.22056795401240195 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 89379 9084 REMEENFAVEA True H1975_Epitope_Rep3 1323.57651580871 1323.57540993586 39.929 2 0.22055282102920704 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 53082 15686 KSDPFLVFY True H1975_Epitope_Rep2 1114.5698972233 1114.5688099358601 65.503 2 0.22054727410488387 0.00036105427849320016 0.9438714419765777 ['ENSG00000124772|ENST00000244751|CPNE5', 'ENST00000551855.1_1_12:39120300-39161507:-|nuORF', 'ENSG00000139117|ENST00000331366|CPNE8', 'ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000144550|Q8IYJ1-2|CPNE9'] 135703 16883 YEILTPNSIPK True PC9_epitope_Rep2 1273.69180326113 1273.69070993586 70.187 2 0.22054681933261702 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 73121 13062 NDYIFSFDK True H1975_Epitope_Rep3 1147.51858992643 1147.51748993586 55.484 2 0.2205462117117909 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113643|P54136-2|RARS1', 'ENSG00000113643|ENST00000231572|RARS1', 'MAT2B-RARS|1|fusion', 'MAT2B-RARS|2|fusion'] 104879 8442 STETHEELLY True H1975_Epitope_Rep2 1220.55609763396 1220.5550099358602 37.422 2 0.22052740449347577 0.00036105427849320016 0.9438714419765777 ['ENSG00000110717|ENST00000313468|NDUFS8'] 89173 10499 REIDDYIVQA True H1975_Epitope_Rep2 1220.6037165327198 1220.60260993586 45.402 2 0.2205242305852322 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 93642 7394 RTEPFQDGY True H1975_Epitope_Rep2 1111.4934378077498 1111.4923499358601 33.383 2 0.22052048509155833 0.00036105427849320016 0.9438714419765777 ['ENSG00000164543|ENST00000319357|STK17A'] 75390 5191 NQELQEINR True H1975_Epitope_Rep3 1142.5679997303398 1142.5669099358602 25.064 2 0.22050723120903823 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 99399 10639 SLEDQVEM[Oxidation]LR True H1975_Epitope_Rep1 1234.58635259686 1234.58524993586 45.88 2 0.22049148856576717 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 103742 15340 SRFEFNQSL True PC9_epitope_Rep2 1126.54072235334 1126.5396299358601 64.285 2 0.22047682525192486 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.D632Efs*4|1|0.14|ENSG00000048028|chr11:113812336-113812352|TCAGGCCTCCATAGGAA/-|frameshift_variant', 'ENST00000545608.5_2_11:113688400-113704155:-|nuORF', 'ENST00000540438.5_1_11:113691037-113702685:-|nuORF'] 75588 13403 NQQEFVRAL True PC9_epitope_Rep5 1103.5723568347898 1103.5712499358601 56.571 2 0.22046770712220895 0.00036105427849320016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 67449 7572 LTEDKETLQY True H1975_Epitope_Rep2 1238.60304782638 1238.6019499358601 34.077 2 0.2204662385913187 0.00036105427849320016 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'TUBGCP2|p.S354Vfs*53|1|0.11|ENSG00000130640|chr10:133292653-133292654|-/C|frameshift_variant'] 900 7632 [Acetylation]-ADM[Oxidation]QNLVER True H1975_Epitope_Rep1 1132.51827335334 1132.51716993586 34.342 2 0.22044310511655707 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1'] 117463 10721 VADTVARVL True PC9_epitope_Rep6 942.5498304850598 942.54872993586 52.05 2 0.22043961637408746 0.00036105427849320016 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 33973 12417 GNFNYIEFTR True NCI_RA007_Epitope_Rep5 1259.5934862021898 1259.5923899358602 54.419 2 0.2204385557606303 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 69918 21125 LYDIILKNF True PC9_epitope_Rep2 1137.64339651673 1137.6422899358602 86.716 2 0.22042596574296097 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 128473 9906 VSEVSSLNY True H1975_Epitope_Rep2 996.4763907612801 996.47584496793 43.092 1 0.22041574611652104 0.00036105427849320016 0.9438714419765777 ['ENSG00000117000|ENST00000372771|RLF'] 85006 10684 QIFNGTFVK True NCI_RA007_Epitope_Rep2 1052.5654805492 1052.5643899358602 46.16 2 0.2204090681427485 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 29324 10605 FVDPYPVNKY True H1975_Epitope_Rep2 1240.6128246644398 1240.61172993586 45.816 2 0.22040764756639034 0.00036105427849320016 0.9438714419765777 ['ENSG00000174010|ENST00000328046|KLHL15'] 102906 17253 SQIEADFRL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 74.371 2 0.22040104550065817 0.00036105427849320016 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 41653 15379 IDIIPNPQER True PC9_epitope_Rep3 1193.64043639461 1193.6393299358601 64.311 2 0.22039990587016112 0.00036105427849320016 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 39933 7938 HQNEIVQSL True NCI_RA007_Epitope_Rep4 1066.54072235334 1066.5396299358601 37.275 2 0.22038868470699707 0.00036105427849320016 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.Q1049Lfs*8|1|0.14|ENSG00000120800|chr12:101327183-101327186|CCAA/-|frameshift_variant', 'ENST00000551825.1_1_12:101673946-101684681:+|nuORF'] 89513 11576 REQYLELVSA True H1975_Epitope_Rep2 1206.6244519773 1206.62334993586 49.592 2 0.22038600531107005 0.00036105427849320016 0.9438714419765777 ['ENSG00000084092|ENST00000264230|NOA1'] 137125 8857 YLDESKQLY True H1975_Epitope_Rep2 1157.56045473841 1157.5593499358602 39.035 2 0.22038050763514816 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-7|PRXL2B'] 17551 18172 EHIQNIMTL True PC9_epitope_Rep3 1097.55392988933 1097.55282993586 75.102 2 0.2203799913716878 0.00036105427849320016 0.9438714419765777 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 116682 11963 TYISWKEEL True NCI_RA007_Epitope_Rep3 1167.58119018299 1167.58008993586 54.178 2 0.22037641606920913 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 41417 10793 IASPEGQDYLK True PC9_epitope_Rep2 1219.6084675599898 1219.60736993586 46.833 2 0.2203713981562562 0.00036105427849320016 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 53456 9173 KVIDPATATSV True PC9_epitope_Rep6 1100.607739284 1100.60664993586 45.41 2 0.2203702710693492 0.00036105427849320016 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 39694 8020 HPTWALKEA True PC9_epitope_Rep2 1051.5450794577898 1051.54398993586 36.209 2 0.22036733284205265 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 47499 22301 IYLDLPQNF True PC9_epitope_Rep5 1121.57571087973 1121.57460993586 90.788 2 0.2203658765586121 0.00036105427849320016 0.9438714419765777 ['ENSG00000013561|ENST00000394520|RNF14', 'ENST00000502341.5_1_5:141348723-141357950:+|nuORF'] 90547 9812 RKFLETVEL True NCI_RA007_Epitope_Rep3 1133.6444591458899 1133.6433699358602 45.661 2 0.22036309158715853 0.00036105427849320016 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 105517 12820 SVDGVIKEV True PC9_epitope_Rep1 944.51786165044 944.51676993586 54.186 2 0.22035809494269715 0.00036105427849320016 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 101779 11527 SPIENIQRV True PC9_epitope_Rep1 1054.57710786206 1054.5760099358602 49.218 2 0.22034272477970268 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 111607 10713 TLNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep2 1189.6376598937302 1189.63656993586 46.27 2 0.22033614405007473 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 77222 20961 NYIEFTRIL True PC9_epitope_Rep5 1167.62880908175 1167.6277099358601 85.686 2 0.22033227605009417 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 47474 12201 IYKDSSTFL True PC9_epitope_Rep6 1072.5440763982801 1072.5429699358601 58.298 2 0.22031716663425055 0.00036105427849320016 0.9438714419765777 ['ENSG00000145388|ENST00000388822|METTL14'] 108026 5323 TDEGIAYR True NCI_RA007_Epitope_Rep2 923.4348603024698 923.43376993586 25.327 2 0.22031342048686423 0.00036105427849320016 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF'] 29039 12811 FTLSHITQL True H1975_Epitope_Rep2 1058.5760452329 1058.57494993586 54.386 2 0.2203067322935524 0.00036105427849320016 0.9438714419765777 ['ENSG00000148484|ENST00000345264|RSU1'] 4728 19863 ALDVANKIGII True PC9_epitope_Rep3 1125.6757592741699 1125.67466993586 81.64 2 0.22028791539571904 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 2314 5611 AEQAERYDDMA True H1975_Epitope_Rep2 1297.52448023585 1297.5233899358602 26.584 2 0.22028414754636383 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 140542 13698 YYLNDLERI True NCI_RA007_Epitope_Rep2 1197.6029882567298 1197.60188993586 57.927 2 0.22028342114459687 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 9849 20667 AYLPKILQI True PC9_epitope_Rep2 1057.65356727761 1057.6524699358602 84.932 2 0.22027197914481417 0.00036105427849320016 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 22277 4297 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 21.643 2 0.22027158645905676 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 44691 17909 IPNPAQTSVVV True PC9_epitope_Rep1 1123.62372370131 1123.62262993586 73.678 2 0.22026919959170654 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 29701 18766 FVNVVPTFGK True PC9_epitope_Rep5 1106.6124307416198 1106.61132993586 77.194 2 0.22026699087375912 0.00036105427849320016 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 17703 15917 EHSLPTLGL True PC9_epitope_Rep6 965.51819600361 965.51708993586 73.511 2 0.2202595220604614 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 29476 20676 FVIDLQTRL True PC9_epitope_Rep1 1103.63389446219 1103.63278993586 84.354 2 0.22025448972947329 0.00036105427849320016 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'ITGB4-RBM39|1|fusion', 'ENST00000471635.5_1_20:34297104-34301010:-|nuORF'] 91312 13010 RMDNIYFEY True H1975_Epitope_Rep2 1249.54375912845 1249.5426699358602 55.161 2 0.22025427676489703 0.00036105427849320016 0.9438714419765777 ['ENSG00000113318|ENST00000265081|MSH3'] 85741 19994 QLVDIIEKV True PC9_epitope_Rep2 1055.62266107215 1055.6215699358602 82.309 2 0.22024718355384457 0.00036105427849320016 0.9438714419765777 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 132257 18368 VYKVVGNLL True PC9_epitope_Rep1 1003.6066170851898 1003.60552993586 75.443 2 0.22024249033750376 0.00036105427849320016 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.E1166K|1|0.16|ENSG00000183856|chr1:156535174-156535174|C/T|missense_variant'] 28661 15392 FSSPHLVQV True PC9_epitope_Rep5 1012.5341804209198 1012.53308993586 64.213 2 0.22024128629008238 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 104760 13680 STDNFTRILEY True H1975_Epitope_Rep1 1357.65139500113 1357.6502899358602 57.756 2 0.22023940316690332 0.00036105427849320016 0.9438714419765777 ['ENSG00000161638|ENST00000293379|ITGA5', 'ITGA5|p.A504Pfs*12|1|0.15|ENSG00000161638|chr12:54404201-54404201|G/-|frameshift_variant'] 123016 20401 VGYDKDFLTI True PC9_epitope_Rep1 1169.5968402471299 1169.59574993586 83.285 2 0.22023621610111377 0.00036105427849320016 0.9438714419765777 ['ENSG00000123066|ENST00000281928|MED13L'] 899 7365 ADMGHLKY True H1975_Epitope_Rep3 933.43783750793 933.43674993586 33.305 2 0.2202288663588311 0.00036105427849320016 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA'] 114186 19742 TRTNMLLEL True PC9_epitope_Rep3 1089.58523001761 1089.5841299358601 81.165 2 0.220224785737219 0.00036105427849320016 0.9438714419765777 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181', 'RNF181|p.L40Gfs*20|1|0.22|ENSG00000168894|chr2:85596550-85596551|TT/-|frameshift_variant'] 72284 8028 MSDVNLKY True H1975_Epitope_Rep3 968.4637179025999 968.46262993586 35.852 2 0.2202237282659078 0.00036105427849320016 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1-LYPLA1|1|fusion', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 53498 17564 KVLNELTQL True PC9_epitope_Rep1 1056.6179100448799 1056.6168099358601 72.353 2 0.22022226961651092 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 26394 12722 FIIYDTHSL True NCI_RA007_Epitope_Rep4 1107.56006081559 1107.5589699358602 55.99 2 0.22022200736398265 0.00036105427849320016 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'ENST00000539652.1_1_12:66522892-66539669:-|nuORF'] 67554 9116 LTEQRALLY True H1975_Epitope_Rep2 1105.6131590176099 1105.61206993586 40.018 2 0.2202174270109321 0.00036105427849320016 0.9438714419765777 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2'] 89659 9865 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 42.932 3 0.2202083576752482 0.00036105427849320016 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 61120 10441 LLDDMNHCY True H1975_Epitope_Rep2 1122.4474162154602 1122.4463099358602 45.176 2 0.22020598262490962 0.00036105427849320016 0.9438714419765777 ['ENSG00000117318|ENST00000374561|ID3'] 24727 11762 FAYDGKDYL True NCI_RA007_Epitope_Rep2 1090.4971262058598 1090.4960299358602 50.35 2 0.22020565235555337 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 97331 13440 SFVNDIFER True H1975_Epitope_Rep1 1125.5454733806098 1125.54436993586 56.811 2 0.22020214738916377 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 88019 7637 QVSPEAGVQKV True PC9_epitope_Rep5 1140.6138872935999 1140.61278993586 34.323 2 0.22020166357441306 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 53697 14758 KYDEIFYNL True NCI_RA007_Epitope_Rep1 1203.5811901829898 1203.58008993586 61.462 2 0.22019163190070734 0.00036105427849320016 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 75370 12211 NQDDSILKV True PC9_epitope_Rep4 1030.5294889632999 1030.52897496793 54.789 1 0.2201813810814299 0.00036105427849320016 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 17499 21861 EHIGIGLLSL True PC9_epitope_Rep1 1050.60734536118 1050.6062499358602 88.9 2 0.22017650675491407 0.00036105427849320016 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 28767 9265 FTDAGFEHY True H1975_Epitope_Rep1 1085.4454249861699 1085.4443299358602 40.549 2 0.22017625071783975 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A'] 28533 9111 FSHYMEENL True NCI_RA007_Epitope_Rep3 1168.4859098991599 1168.48480993586 42.924 2 0.2201760635427753 0.00036105427849320016 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 137197 8437 YLDYHMEKY True H1975_Epitope_Rep2 1260.5485101557201 1260.54685490379 37.403 3 0.2201743168797661 0.00036105427849320016 0.9438714419765777 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT'] 55494 16528 LAVNM[Oxidation]VPFPR True PC9_epitope_Rep2 1158.62195025994 1158.6208499358602 68.815 2 0.22015644336736898 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 71710 5383 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 25.742 2 0.2201345357050505 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 26952 21361 FLIQHLPLV True PC9_epitope_Rep5 1078.65390163078 1078.6528099358602 87.224 2 0.22010715020476343 0.00036105427849320016 0.9438714419765777 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 87651 17456 QVAFDFTKV True PC9_epitope_Rep6 1053.54949613189 1053.54838993586 79.765 2 0.2201010587258532 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 6650 9965 AQAEVYKEL True PC9_epitope_Rep2 1049.53932537101 1049.53822993586 43.661 2 0.22008476620992076 0.00036105427849320016 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 77233 19486 NYIGLINRI True PC9_epitope_Rep2 1074.61857875122 1074.61748993586 80.335 2 0.22008463244983345 0.00036105427849320016 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 56230 13991 LDPSIFESLQK True H1975_Epitope_Rep3 1275.6710678165498 1275.66996993586 59.135 2 0.22008076690915088 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 94667 8349 RYLEKPMEI True NCI_RA007_Epitope_Rep4 1177.6165301458898 1177.6154299358602 38.929 2 0.22007702988128747 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 107541 10927 TADHNLLLYE True H1975_Epitope_Rep3 1187.58225281215 1187.5811499358601 47.117 2 0.22006172983338826 0.00036105427849320016 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 57863 9884 LEQEIATYR True PC9_epitope_Rep5 1121.57168812845 1121.5705899358602 42.989 2 0.22004683940932201 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16722254-16722455:-|nuORF', 'CON__P35900', 'KRT20|p.R372S|2|0.36|ENSG00000171431|chr17:40878170-40878170|G/T|missense_variant', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__Q61782', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312'] 53227 12005 KTEDPDLPAFY True H1975_Epitope_Rep1 1294.6081332068197 1294.60702993586 51.185 2 0.220029824697437 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 18683 7215 ELDAVQREY True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 32.687 2 0.22000241791209596 0.00036105427849320016 0.9438714419765777 ['ENSG00000080986|ENST00000261597|NDC80'] 129291 5120 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 24.77 3 0.2200023034116302 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 7426 9063 ASDAAPLQY True H1975_Epitope_Rep2 934.43961132974 934.4390649679301 39.814 1 0.21999821588777776 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 37226 19867 GVVDPRAISVL True PC9_epitope_Rep1 1124.65535818276 1124.6542699358602 81.237 2 0.21999367344392706 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 65078 15328 LSDLLDWKY True H1975_Epitope_Rep1 1151.58627556343 1151.5851699358602 64.227 2 0.21998347583113712 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 4960 20897 ALIEKLVEL True PC9_epitope_Rep5 1026.63249747986 1026.6314099358601 85.435 2 0.21998211229517464 0.00036105427849320016 0.9438714419765777 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 76343 12412 NSELSCQLY True H1975_Epitope_Rep2 1055.4593607981499 1055.45826993586 52.828 2 0.21997862613134514 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 118340 5716 VDFNSEEDAK True NCI_RA007_Epitope_Rep2 1152.4934973774 1152.49240993586 26.85 2 0.21997841250744807 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 107324 18416 SYRELFEFF True NCI_RA007_Epitope_Rep5 1236.5815245361598 1236.5804299358601 77.652 2 0.21997525481379568 0.00036105427849320016 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 27689 18963 FQDGDTIVNV True PC9_epitope_Rep3 1106.52440358286 1106.5233099358602 78.165 2 0.21997433022612226 0.00036105427849320016 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 47200 16489 IYAPKLQEF True PC9_epitope_Rep4 1107.59644632431 1107.5953499358602 71.395 2 0.21994023263992266 0.00036105427849320016 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 135843 11226 YEQLSSEALEA True H1975_Epitope_Rep2 1238.56666231766 1238.5655699358601 48.222 2 0.219935454501687 0.00036105427849320016 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 9649 15316 AYGKDFHLI True PC9_epitope_Rep3 1062.5498304850598 1062.5487299358601 64.064 2 0.21992611816188523 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 38768 12340 HHYEGAVVIL True PC9_epitope_Rep4 1136.5978433066398 1136.59674993586 55.274 2 0.21992239681840264 0.00036105427849320016 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 138430 20388 YRDWFSSQL True PC9_epitope_Rep3 1200.55637241748 1200.55526993586 83.673 2 0.21992098078448044 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2', 'ENST00000522359.2_1_11:61630757-61632750:+|nuORF'] 136484 17417 YHIDVGTQTF True PC9_epitope_Rep5 1179.5560380643099 1179.5549499358601 71.995 2 0.21991033565894968 0.00036105427849320016 0.9438714419765777 ['ENSG00000118496|ENST00000237281|FBXO30'] 96714 12974 SEQEHFLIVP True H1975_Epitope_Rep2 1197.6029882567298 1197.60188993586 55.019 2 0.2199050522302928 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ADD1-FAM193A|4|fusion', 'ADD1-FAM193A|3|fusion', 'ADD1-FAM193A|1|fusion', 'ADD1-FAM193A|2|fusion', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 88928 6369 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 29.426 2 0.21989994896601003 0.00036105427849320016 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 43546 12184 IIDYLTDHY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 51.947 2 0.21989557415365565 0.00036105427849320016 0.9438714419765777 ['ENSG00000105865|ENST00000265720|DUS4L', 'nc|ENSG00000288558|O95620-2|DUS4L', 'ENST00000485825.1_1_7:107215546-107218002:+|nuORF'] 8307 15051 ATLKELTSL True PC9_epitope_Rep6 974.56481184286 974.56370993586 69.936 2 0.2198926479317537 0.00036105427849320016 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 106760 13802 SYFPEITHI True H1975_Epitope_Rep2 1105.54441075145 1105.5433099358602 58.236 2 0.21987872753817791 0.00036105427849320016 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 118671 10186 VEAQVYILSK True NCI_RA007_Epitope_Rep2 1148.6441247927198 1148.64302993586 44.209 2 0.21987864518441458 0.00036105427849320016 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM', 'ENST00000569217.1_1_16:28854298-28855510:-|nuORF'] 87347 8195 QTDDTWRTEY True H1975_Epitope_Rep1 1313.55240923585 1313.5513099358602 36.462 2 0.21987077837238936 0.00036105427849320016 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 129900 5758 VTLTSEEEAR True NCI_RA007_Epitope_Rep1 1133.5564319871298 1133.55532993586 26.454 2 0.21986332749620535 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 131841 6782 VYASDRATF True NCI_RA007_Epitope_Rep4 1028.4927095317598 1028.4916099358602 32.708 2 0.2198572452715777 0.00036105427849320016 0.9438714419765777 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 53224 9189 KTDSDSDLQLY True H1975_Epitope_Rep2 1283.58812603823 1283.58702993586 40.298 2 0.21985616958775303 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 60216 12369 LIDADPYLKY True H1975_Epitope_Rep3 1209.62814037541 1209.6270499358602 52.763 2 0.2198386474625361 0.00036105427849320016 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2'] 25326 6971 FEERSGVVP True H1975_Epitope_Rep3 1018.5083595958997 1018.50726993586 31.775 2 0.21983196367934182 0.00036105427849320016 0.9438714419765777 ['ENSG00000170584|ENST00000302764|NUDCD2', 'NUDCD2|p.G57Afs*15|2|0.32|ENSG00000170584|chr5:163459881-163459881|C/-|frameshift_variant'] 64207 18481 LQIEDFEARI True PC9_epitope_Rep6 1232.6401020414398 1232.63900993586 83.727 2 0.21980180112577002 0.00036105427849320016 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 52025 7613 KLFVGGIKED True NCI_RA007_Epitope_Rep4 1104.6179100448799 1104.6168099358601 35.936 2 0.21979362564741461 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 115298 17273 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54370993586 71.732 2 0.21978609386883996 0.00036105427849320016 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 74171 8492 NHYQKQLEI True PC9_epitope_Rep5 1171.5985715826298 1171.59746993586 37.605 2 0.21978591551182194 0.00036105427849320016 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 127634 9406 VRDQTELRL True PC9_epitope_Rep1 1128.62512068364 1128.6234749037899 41.039 3 0.21977910482827692 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1', 'IRAK1|p.P308Hfs*45|1|0.26|ENSG00000184216|chrX:154017054-154017054|G/-|frameshift_variant'] 22898 9359 EVFEDAAEIR True H1975_Epitope_Rep1 1177.5615173675699 1177.5604299358602 40.906 2 0.21977862410153473 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 131802 9605 VYANGIRNI True PC9_epitope_Rep4 1018.5559784946599 1018.55488993586 44.57 2 0.21975563853637725 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 85348 11183 QLDLAQRTLY True H1975_Epitope_Rep2 1219.6560864587502 1219.6549899358602 48.054 2 0.2197527857653181 0.00036105427849320016 0.9438714419765777 ['ZNF544|p.L412Tfs*29|1|0.22|ENSG00000198131|chr19:58261839-58261840|-/A|frameshift_variant', 'ENSG00000198131|ENST00000687789|ZNF544', 'ENST00000595560.1_1_19:58067392-58071050:-|nuORF', 'nc|ENSG00000251369|Q7Z398-2|ZNF550', 'ENSG00000251369|ENST00000699333|ZNF550', 'ENSG00000204524|ENST00000414468|ZNF805', 'ZNF264|p.E487Rfs*21|1|0.32|ENSG00000083844|chr19:57212551-57212552|-/CGTA|frameshift_variant', 'ENSG00000083844|ENST00000263095|ZNF264', 'ENST00000596597.5_1_19:58757693-58758161:+|nuORF'] 60164 12680 LHYPSTTAL True PC9_epitope_Rep2 1001.51819600361 1001.51708993586 54.081 2 0.21975032943837197 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 98284 4725 SIFKQPVTK True NCI_RA007_Epitope_Rep3 1046.61243074162 1046.61132993586 25.533 2 0.21974217166758103 0.00036105427849320016 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 53701 20244 KYDEIFYNL True PC9_epitope_Rep2 1203.5811901829898 1203.58008993586 83.288 2 0.21974169978929176 0.00036105427849320016 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 96628 5591 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 26.507 2 0.21973509501419727 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 67532 12536 LTEMQVESSYY True H1975_Epitope_Rep2 1348.58568351008 1348.58458993586 53.314 2 0.21973409622985432 0.00036105427849320016 0.9438714419765777 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-3|VPS13B', 'VPS13B|p.N469Ifs*2|1|0.13|ENSG00000132549|chr8:99135117-99135117|A/-|frameshift_variant', 'nc|ENSG00000132549|Q7Z7G8-4|VPS13B'] 56969 3938 LEEAEEEAQR True NCI_RA007_Epitope_Rep2 1202.5415101989797 1202.54040993586 19.954 2 0.21973308092616817 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 40834 16104 HVLDVIHEV True PC9_epitope_Rep5 1059.57129420563 1059.57018993586 66.934 2 0.21972638012601073 0.00036105427849320016 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 114335 6524 TSDDVKEQIY True H1975_Epitope_Rep1 1196.55609763396 1196.5550099358602 30.154 2 0.21972177574695204 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 69914 15422 LYDIILKNF True NCI_RA007_Epitope_Rep3 1137.64339651673 1137.6422899358602 68.216 2 0.2197202790820004 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 129431 12015 VTEKDLLLY True H1975_Epitope_Rep1 1092.60667665484 1092.60556993586 51.223 2 0.21970416187107872 0.00036105427849320016 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 61117 13745 LLDDAQRLLY True H1975_Epitope_Rep2 1218.66083748602 1218.6597499358602 58.016 2 0.2196981523284545 0.00036105427849320016 0.9438714419765777 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000523439.1_1_19:57999318-58003198:+|nuORF', 'nc|ENSG00000152439|Q6PK81-2|ZNF773', 'ENSG00000152439|ENST00000282292|ZNF773', 'nc|ENSG00000105136|Q96HQ0-6|ZNF419', 'nc|ENSG00000105136|Q96HQ0-2|ZNF419', 'nc|ENSG00000105136|Q96HQ0-3|ZNF419', 'nc|ENSG00000105136|Q96HQ0-4|ZNF419', 'ENSG00000105136|ENST00000221735|ZNF419', 'nc|ENSG00000105136|Q96HQ0-5|ZNF419', 'ENSG00000083814|ENST00000317398|ZNF671'] 63975 11631 LQAEVKQVL True PC9_epitope_Rep2 1026.6073453611798 1026.6062499358602 50.066 2 0.21969723588161744 0.00036105427849320016 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 71706 4974 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 24.217 2 0.21968628045618738 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 129315 14261 VTDSGPTFNYL True H1975_Epitope_Rep3 1212.56626839484 1212.56516993586 60.197 2 0.21968365313594143 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 69496 11266 LVSESSDVLPK True PC9_epitope_Rep5 1172.6288686514001 1172.6277699358602 48.327 2 0.21968151481882847 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 104880 8573 STETHEELLY True H1975_Epitope_Rep3 1220.55609763396 1220.5550099358602 37.967 2 0.2196811808986638 0.00036105427849320016 0.9438714419765777 ['ENSG00000110717|ENST00000313468|NDUFS8'] 26686 11979 FLDDGHTFNY True H1975_Epitope_Rep1 1227.51965255559 1227.5185499358602 51.084 2 0.2196764526006565 0.00036105427849320016 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 24206 15682 EYVEKFYRI True PC9_epitope_Rep3 1245.6393737654498 1245.63826993586 65.463 2 0.2196749129278623 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 77548 21097 NYSGAAEYLYF True PC9_epitope_Rep4 1296.56626839484 1296.56516993586 89.312 2 0.21967314595352141 0.00036105427849320016 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 22135 13836 ESYSIYVYK True PC9_epitope_Rep4 1150.55464108198 1150.55354993586 61.119 2 0.21966667717008287 0.00036105427849320016 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 132076 6699 VYIKHPVSL True NCI_RA007_Epitope_Rep5 1054.61751612206 1054.61640993586 32.441 2 0.21966643151034135 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 14318 10428 DTDHYFLRY True H1975_Epitope_Rep1 1228.5512870370399 1228.55018993586 45.065 2 0.21966573261148598 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 9871 20866 AYMPHTFFI True PC9_epitope_Rep3 1125.53173789277 1125.53064993586 85.533 2 0.21965946659475777 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 54082 15937 KYMDIEFDF True NCI_RA007_Epitope_Rep4 1206.5267120819797 1206.52560993586 69.17 2 0.2196557252649029 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000471904.1_1_2:192128111-192215016:+|nuORF', 'MYO1A|p.T562Dfs*32|1|0.09|ENSG00000166866|chr12:57038489-57038490|-/G|frameshift_variant', 'ENSG00000166866|ENST00000300119|MYO1A'] 53637 11781 KWNPTAGVAF True NCI_RA007_Epitope_Rep5 1089.56072952193 1089.5596299358601 51.976 2 0.21965028584584306 0.00036105427849320016 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 47662 10379 IYPPKLHQF True PC9_epitope_Rep6 1141.62841515893 1141.62676490379 50.646 3 0.21963763470608694 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 113297 15329 TQIDHYVGI True PC9_epitope_Rep3 1044.52400966004 1044.52290993586 64.118 2 0.21963655085734804 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 87402 11298 QTDPVTLQY True H1975_Epitope_Rep3 1063.51858992643 1063.51807496793 48.563 1 0.21963235367144499 0.00036105427849320016 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 76086 8706 NRMLAQQAV True PC9_epitope_Rep3 1029.53894853153 1029.53784993586 38.438 2 0.2196146694670386 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 117125 18454 TYSPALNKMF True PC9_epitope_Rep1 1170.5743309807401 1170.5732299358601 75.775 2 0.2196105366231778 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 5204 11597 ALPSKLPTF True NCI_RA007_Epitope_Rep3 972.56441792004 972.56332993586 52.743 2 0.21960269330285928 0.00036105427849320016 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 47587 7971 IYNGDM[Oxidation]EKI True PC9_epitope_Rep1 1097.50631137101 1097.5052099358602 35.482 2 0.21960209601671002 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 69475 7821 LVSESSDVLPK True H1975_Epitope_Rep3 1172.6288686514001 1172.6277699358602 35.062 2 0.21959963082187012 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 27913 20147 FQLRSFDQL True PC9_epitope_Rep5 1152.5927579261997 1152.5916699358602 82.543 2 0.21959865870739007 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 140834 20029 YYTDIMHTL True PC9_epitope_Rep1 1155.5270464351497 1155.5259499358601 81.869 2 0.2195941874856646 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 77046 6573 NVYEVVNPK True NCI_RA007_Epitope_Rep3 1060.5553097883198 1060.5542099358602 32.906 2 0.21959320235151714 0.00036105427849320016 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 86513 6884 QRAITGASL True PC9_epitope_Rep4 915.5137793295099 915.51268993586 33.7 2 0.2195843693803063 0.00036105427849320016 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 140361 15309 YYEKLHTYF True PC9_epitope_Rep1 1262.5971746003 1262.5960699358602 63.707 2 0.21957712656153347 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 135256 18197 YAYDGKDYLAL True PC9_epitope_Rep4 1290.6132185872598 1290.6121299358601 78.064 2 0.21957692282842228 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 140859 19519 YYTKGFALL True PC9_epitope_Rep2 1074.5749826037397 1074.57388993586 80.464 2 0.21957510340844588 0.00036105427849320016 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 129309 14269 VTDSGPTFNYL True H1975_Epitope_Rep1 1212.56626839484 1212.56516993586 60.07 2 0.21956876866397818 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 126686 17668 VPRPAVLDPAL True PC9_epitope_Rep5 1146.67609362734 1146.6749899358601 72.974 2 0.21956513658817423 0.00036105427849320016 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 77235 19869 NYIGLINRI True PC9_epitope_Rep5 1074.61857875122 1074.61748993586 81.478 2 0.21956438718209442 0.00036105427849320016 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 94866 10679 RYNPENNTW True PC9_epitope_Rep1 1192.52613491836 1192.5250299358602 45.967 2 0.2195561344365115 0.00036105427849320016 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion', 'ENST00000494880.5_1_1:185268818-185270317:-|nuORF'] 104984 8500 STIEYVIQR True NCI_RA007_Epitope_Rep3 1107.59242357303 1107.5913299358601 40.508 2 0.21955338918553344 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 137648 19544 YLYDLNHTL True PC9_epitope_Rep1 1150.5658744720201 1150.56476993586 80.0 2 0.21954802001990475 0.00036105427849320016 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1'] 104862 15249 STEQIPILY True H1975_Epitope_Rep2 1062.5597264624198 1062.5586299358602 63.813 2 0.21954158705800828 0.00036105427849320016 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 71972 13695 MPWGDPNYRSA True PC9_epitope_Rep4 1292.5608061749201 1292.5597099358602 60.567 2 0.2195405027338707 0.00036105427849320016 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 38708 18146 HHSNILLTF True PC9_epitope_Rep5 1080.5716285588 1080.5705299358601 74.808 2 0.21953445679058917 0.00036105427849320016 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 115613 21922 TVIQFLERI True PC9_epitope_Rep5 1117.64954452633 1117.64844993586 89.365 2 0.2195308814089283 0.00036105427849320016 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 65181 15457 LSDVFPGVQY True H1975_Epitope_Rep2 1123.5549754351498 1123.5538699358601 64.613 2 0.219528727432182 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 71388 9575 MIEPRTLQY True H1975_Epitope_Rep1 1149.58523001761 1149.5841299358601 41.754 2 0.2194971707852429 0.00036105427849320016 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 94725 10856 RYLEQLHQL True PC9_epitope_Rep6 1198.64585612822 1198.64474993586 52.617 2 0.21948423735181696 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 3969 13724 AHELVTSKIAL True PC9_epitope_Rep3 1180.6815729306 1180.67992490379 57.871 3 0.2194771334964534 0.00036105427849320016 0.9438714419765777 ['ENSG00000011454|ENST00000373647|RABGAP1', 'nc|ENSG00000152061|Q5R372-7|RABGAP1L', 'nc|ENSG00000152061|Q5R372-6|RABGAP1L', 'nc|ENSG00000152061|Q5R372-5|RABGAP1L', 'CACYBP-RABGAP1L|7|fusion', 'nc|ENSG00000152061|B7ZAP0|RABGAP1L', 'ENST00000469553.6_1_1:174927262-174959135:+|nuORF', 'CACYBP-RABGAP1L|6|fusion', 'nc|ENSG00000152061|Q5R372-8|RABGAP1L', 'ENSG00000152061|ENST00000681986|RABGAP1L'] 70886 11848 MEHPYFYTV True H1975_Epitope_Rep2 1185.5164817514499 1185.5153899358602 50.651 2 0.21947166901444817 0.00036105427849320016 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 90146 12400 RHADLEIRL True PC9_epitope_Rep5 1121.63054041725 1121.62944993586 52.694 2 0.21946337625773826 0.00036105427849320016 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP', 'ENST00000565830.5_1_16:29841852-29843003:+|nuORF'] 87469 13502 QTETGTPYMLY True H1975_Epitope_Rep1 1302.5802042068199 1302.57910993586 57.055 2 0.219461343184581 0.00036105427849320016 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 116951 16265 TYPIKTPTF True PC9_epitope_Rep2 1066.5698972233001 1066.5688099358601 67.804 2 0.21945990787436948 0.00036105427849320016 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 53192 10067 KTAAEDAIRNL True PC9_epitope_Rep2 1200.6462500510397 1200.64459490379 44.053 3 0.21945318797027627 0.00036105427849320016 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000173933|Q9BWF3-3|RBM4', 'nc|ENSG00000173933|Q9BWF3-4|RBM4', 'nc|ENSG00000173933|Q9BWF3-2|RBM4', 'ENSG00000173914|ENST00000310046|RBM4B'] 114840 11944 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.4974899358601 51.021 2 0.21940890579727684 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 95157 8317 [Acetylation]-SAAEAGGVFHR True NCI_RA007_Epitope_Rep2 1142.5468706792399 1142.54576993586 36.991 2 0.21940556801045974 0.00036105427849320016 0.9438714419765777 ['ENSG00000103381|ENST00000381774|CPPED1', 'ENST00000539677.1_1_16:12874994-12897657:-|nuORF', 'nc|ENSG00000103381|Q9BRF8-3|CPPED1', 'nc|ENSG00000103381|Q9BRF8-2|CPPED1'] 92345 7834 RQPDSGISSI True PC9_epitope_Rep4 1058.5356369729 1058.53452993586 37.543 2 0.21939964986311444 0.00036105427849320016 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 77102 17862 NYAQVFNKL True PC9_epitope_Rep1 1095.57129420563 1095.57018993586 73.499 2 0.21939881219894725 0.00036105427849320016 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 64978 7540 LSDDLHVERY True H1975_Epitope_Rep3 1245.59896550545 1245.59731490379 33.985 3 0.2193926061443705 0.00036105427849320016 0.9438714419765777 ['ENSG00000162910|ENST00000336520|MRPL55', 'nc|ENSG00000162910|Q7Z7F7-2|MRPL55'] 43547 12066 IIDYLTDHY True H1975_Epitope_Rep3 1151.54989005471 1151.5487899358602 51.574 2 0.21938677879755794 0.00036105427849320016 0.9438714419765777 ['ENSG00000105865|ENST00000265720|DUS4L', 'nc|ENSG00000288558|O95620-2|DUS4L', 'ENST00000485825.1_1_7:107215546-107218002:+|nuORF'] 24337 8673 FADLSEAANR True PC9_epitope_Rep6 1092.5199869087598 1092.5188899358602 43.207 2 0.219381769166251 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 47282 19970 IYFEYSHAF True PC9_epitope_Rep1 1175.52876068731 1175.52766993586 81.639 2 0.21937759975034501 0.00036105427849320016 0.9438714419765777 ['ENSG00000113318|ENST00000265081|MSH3'] 87654 7173 QVASTLKQV True PC9_epitope_Rep1 972.5603951687598 972.55928993586 32.402 2 0.2193732888111393 0.00036105427849320016 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 9698 17239 AYIERMNYI True PC9_epitope_Rep1 1171.5695799534699 1171.56848993586 71.128 2 0.21935479165549812 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'ENSG00000176105|ENST00000314574|YES1'] 104224 9405 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep3 1071.45427579815 1071.4531699358602 41.177 2 0.2193519221578853 0.00036105427849320016 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 119880 16111 VEVTEFEDIK True PC9_epitope_Rep2 1207.59723416995 1207.59612993586 67.23 2 0.21934788557307366 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 43405 8530 IHSEPLGV True PC9_epitope_Rep4 850.45486747106 850.45376993586 40.288 2 0.21934231368664014 0.00036105427849320016 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 98194 14008 SIDSLQLGY True H1975_Epitope_Rep2 994.49712620586 994.49602993586 59.03 2 0.21934038102143594 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 113672 14367 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61278993586 63.171 2 0.21932799720589413 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 42379 10046 IENGHIFTV True H1975_Epitope_Rep3 1028.52909504048 1028.5279899358602 43.678 2 0.21932399580880474 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'SPAG16-CUL3|1|fusion'] 101796 9499 SPIENIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 46.793 2 0.21931963078274572 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 41174 7978 HYVEKPSTF True PC9_epitope_Rep5 1106.53965972418 1106.53856993586 35.627 2 0.21931874529653042 0.00036105427849320016 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220366576-220368936:+|nuORF'] 53958 12893 KYITQGQLLQF True NCI_RA007_Epitope_Rep3 1337.73433677945 1337.7332299358602 57.977 2 0.21931711715151117 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 16473 9414 EELSNVLAAM[Oxidation]R True H1975_Epitope_Rep1 1247.6179870783099 1247.6168899358602 41.124 2 0.21931333361164912 0.00036105427849320016 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 125747 12804 VNFTVDQIR True PC9_epitope_Rep6 1090.5771078620598 1090.5760099358602 60.751 2 0.2193024353403658 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000594885.1_1_19:3984132-3985378:-|nuORF'] 73538 21538 NFIVWLEDQK True PC9_epitope_Rep5 1290.66083748602 1290.6597499358602 87.882 2 0.21930010767291272 0.00036105427849320016 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF'] 74562 9219 NLDDGIDDER True PC9_epitope_Rep3 1160.49456000656 1160.49346993586 40.4 2 0.21929758879062902 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 9848 21054 AYLPKILQI True PC9_epitope_Rep1 1057.65356727761 1057.6524699358602 85.815 2 0.2192968596056242 0.00036105427849320016 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 138087 18914 YQELMSVKL True PC9_epitope_Rep5 1109.57908200801 1109.5779899358602 77.774 2 0.2192935823894822 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 28526 8724 FSHEEIAM[Oxidation]ATV True NCI_RA007_Epitope_Rep1 1249.5648888762898 1249.56378993586 37.936 2 0.21928896157419744 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 113098 6846 TQADWQHRV True PC9_epitope_Rep5 1139.5472047161102 1139.54554490379 31.304 3 0.21928677584967615 0.00036105427849320016 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'HSD17B12-ALKBH3|1|fusion'] 52708 15479 KQLDDLKVEL True PC9_epitope_Rep1 1199.6761531969898 1199.6745149037902 64.361 3 0.21927756297074952 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 100166 18771 SLLENLEKI True PC9_epitope_Rep6 1057.60192562757 1057.60082993586 84.843 2 0.21926491779554524 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 114049 15971 TRNDYVMMY True PC9_epitope_Rep3 1191.50526544475 1191.50416993586 66.579 2 0.21926199094641044 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 53722 14643 KYEELFPAF True NCI_RA007_Epitope_Rep3 1142.5648118428596 1142.56370993586 64.965 2 0.2192612778120428 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 76606 8966 NTFSVVPSPK True NCI_RA007_Epitope_Rep1 1074.5709598524597 1074.5698699358602 38.877 2 0.21925752442924515 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 136908 13102 YKDGTELEL True PC9_epitope_Rep2 1066.51825557326 1066.51714993586 55.673 2 0.21924987998330753 0.00036105427849320016 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 87755 18332 QVFPGLLERV True PC9_epitope_Rep6 1156.6604435631998 1156.65934993586 83.156 2 0.21924439076720578 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 95298 8559 SAELIEEEVAK True H1975_Epitope_Rep1 1216.61869789052 1216.6176099358602 37.848 2 0.21923683104316719 0.00036105427849320016 0.9438714419765777 ['ENST00000502888.1_1_5:140062654-140070871:-|nuORF', 'ENST00000518126.5_1_5:140059363-140070889:-|nuORF', 'ENST00000506579.5_1_5:140058520-140070889:-|nuORF', 'nc|ENSG00000170445|P12081-3|HARS1', 'nc|ENSG00000170445|P12081-2|HARS1', 'nc|ENSG00000170445|P12081-4|HARS1', 'ENSG00000170445|ENST00000504156|HARS1'] 9342 8306 AVTEAEIQQLK True NCI_RA007_Epitope_Rep4 1228.66631678928 1228.66520993586 38.761 2 0.2192354831044529 0.00036105427849320016 0.9438714419765777 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 47578 12079 IYNGDMEKI True PC9_epitope_Rep1 1081.51139637101 1081.51028993586 51.322 2 0.21923035781554007 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 24119 7202 EYSKQMQRF True PC9_epitope_Rep1 1215.57064258263 1215.56954993586 32.518 2 0.21923027902975217 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 41858 17711 IDTIEIITDR True PC9_epitope_Rep4 1187.63976768827 1187.6386699358602 76.151 2 0.21922697585057394 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 84867 9915 QHQSGIVQL True PC9_epitope_Rep2 1008.5352430500798 1008.53414993586 43.471 2 0.21921473485987109 0.00036105427849320016 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 66065 18759 LSNIFVIGK True PC9_epitope_Rep3 989.5909670210499 989.58986993586 77.376 2 0.21919795577354148 0.00036105427849320016 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 140548 18967 YYLNDLERI True PC9_epitope_Rep4 1197.6029882567298 1197.60188993586 81.046 2 0.21919393956429353 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 140485 15922 YYIFIPSKF True NCI_RA007_Epitope_Rep5 1176.6219327961599 1176.62082993586 67.971 2 0.21919141078141313 0.00036105427849320016 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 95468 11736 SALSGHLETV True PC9_epitope_Rep5 1012.5189242796 1012.51782993586 50.144 2 0.21918968373531056 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 7971 15300 ATDLDVANFY True H1975_Epitope_Rep3 1127.51350454599 1127.5124099358602 64.262 2 0.21918726987167184 0.00036105427849320016 0.9438714419765777 ['ENSG00000142252|ENST00000270257|GEMIN7'] 8696 9574 AVDEAADALLK True H1975_Epitope_Rep1 1114.5870038394198 1114.5859099358602 41.749 2 0.21918617723590203 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF', 'ENST00000490238.5_1_2:86389097-86393741:-|nuORF'] 86017 13824 QPITPGPSI True PC9_epitope_Rep4 908.4967322830399 908.49562993586 61.071 2 0.21918552567752608 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 27729 13164 FQDPYTRSL True PC9_epitope_Rep4 1125.54547338061 1125.54436993586 58.532 2 0.21917246513633085 0.00036105427849320016 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 84626 13588 QHDPYITSI True PC9_epitope_Rep1 1072.5189242796 1072.5178299358602 57.121 2 0.21917165196801733 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 4105 11329 AHSVQPLSL True PC9_epitope_Rep4 950.51853035678 950.51742993586 51.356 2 0.2191706511687638 0.00036105427849320016 0.9438714419765777 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 112996 9997 TPSQIGVILR True H1975_Epitope_Rep3 1082.64479349906 1082.64368993586 43.489 2 0.21915581162758774 0.00036105427849320016 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF'] 14925 16183 DYLEVAKHF True PC9_epitope_Rep2 1120.55530978832 1120.5542099358602 67.5 2 0.21912257998007262 0.00036105427849320016 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 107312 12431 SYREDPIVY True PC9_epitope_Rep2 1140.5451390274397 1140.5440499358601 53.123 2 0.21912119706094974 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 69472 7549 LVSESSDVLPK True H1975_Epitope_Rep1 1172.6288686514001 1172.6277699358602 34.03 2 0.21911924807645639 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 2044 4648 AELEGREQVA True H1975_Epitope_Rep2 1100.5462016565998 1100.5451099358602 22.977 2 0.21910262453635365 0.00036105427849320016 0.9438714419765777 ['TRIM56|p.F497Sfs*35|1|0.12|ENSG00000169871|chr7:101088800-101088800|T/-|frameshift_variant', 'ENSG00000169871|ENST00000306085|TRIM56'] 84061 9280 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 40.653 2 0.21910001161417234 0.00036105427849320016 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 9921 8969 AYPHNLM[Oxidation]TF True NCI_RA007_Epitope_Rep3 1108.5011664209198 1108.5000699358602 42.375 2 0.21909516932401735 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 134129 16275 WRDPDEPVL True PC9_epitope_Rep5 1125.5454733806098 1125.54436993586 67.595 2 0.21909395503166504 0.00036105427849320016 0.9438714419765777 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000487654.5_1_1:46033819-46034819:+|nuORF'] 113770 9389 TRDPQVNAF True PC9_epitope_Rep1 1046.5145076054998 1046.5134099358602 40.973 2 0.21907980440306127 0.00036105427849320016 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 37558 21199 GYPLWKVTF True PC9_epitope_Rep3 1109.59096702105 1109.5898699358602 86.832 2 0.2190728516441273 0.00036105427849320016 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 52813 19496 KQVEDDIQQLL True PC9_epitope_Rep2 1327.6983451935498 1327.69724993586 80.374 2 0.21906944751012628 0.00036105427849320016 0.9438714419765777 ['ENSG00000161057|ENST00000292644|PSMC2', 'ENST00000460021.1_1_7:102994369-103002536:+|nuORF'] 118294 6483 VDATAETDLAK True NCI_RA007_Epitope_Rep1 1132.5611830144 1132.56008993586 29.237 2 0.21906837035914098 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 25844 13813 FGFVTFDDHD True NCI_RA007_Epitope_Rep3 1198.4931034545798 1198.49200993586 61.662 2 0.21906252977537127 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 23705 19294 EYIKFLRSI True PC9_epitope_Rep1 1167.6651945904698 1167.6640899358601 79.019 2 0.21905673038821796 0.00036105427849320016 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 70118 20425 LYIVHPTMF True PC9_epitope_Rep3 1119.57868808519 1119.57758993586 83.818 2 0.21905284239788902 0.00036105427849320016 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 48750 10153 KEQDHIIIIP True H1975_Epitope_Rep2 1204.6815729306 1204.67992490379 44.053 3 0.21904986460317002 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 10069 13632 AYVHMVTHF True PC9_epitope_Rep5 1103.52223583823 1103.52167496793 57.459 1 0.2190456807306443 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 43179 8456 IGSLIDVNQSK True H1975_Epitope_Rep1 1172.6401020414398 1172.63900993586 37.455 2 0.21904545675771148 0.00036105427849320016 0.9438714419765777 ['ENST00000544850.5_1_12:10758876-10761762:-|nuORF', 'nc|ENSG00000162385|P61326-2|MAGOH', 'ENSG00000162385|ENST00000371470|MAGOH', 'ENSG00000111196|ENST00000320756|MAGOHB'] 21139 11546 ERDSALETL True PC9_epitope_Rep5 1032.50875351872 1032.5076499358602 49.408 2 0.21901234346704906 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 132178 8184 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5287299358602 41.04 2 0.21900625058483997 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 40596 4689 HTDILKEKY True H1975_Epitope_Rep2 1145.60807363717 1145.6069699358602 23.131 2 0.2190021928343016 0.00036105427849320016 0.9438714419765777 ['DTWD1|p.R271S|1|0.23|ENSG00000104047|chr15:49643476-49643476|A/C|missense_variant', 'nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 76320 6044 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 28.226 2 0.21899818839178328 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 36408 16112 GVIDLIFEK True NCI_RA007_Epitope_Rep5 1032.58554728744 1032.5844499358602 68.704 2 0.21899431753076834 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 68468 18675 LTVEERNLLSV True PC9_epitope_Rep2 1271.7085159544301 1271.7074099358601 77.2 2 0.21899257075257536 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 114910 7762 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 34.806 2 0.21899051116549068 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 41095 15029 HYM[Oxidation]PPPYASL True PC9_epitope_Rep1 1190.5430312328997 1190.54192993586 62.629 2 0.2189779783732146 0.00036105427849320016 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 135706 15252 YEILTPNSIPK True PC9_epitope_Rep6 1273.69180326113 1273.69070993586 70.776 2 0.2189580615149063 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 67207 9227 LTDITKGVQY True H1975_Epitope_Rep3 1136.607739284 1136.60664993586 40.483 2 0.21895117392496666 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 11677 15085 DHDPVDKIVL True PC9_epitope_Rep5 1149.60298825673 1149.60133490379 63.031 3 0.21894215585385698 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 53783 21796 KYFGGVLEYF True PC9_epitope_Rep5 1221.6070110080097 1221.6059099358602 88.87 2 0.2189403269095517 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 72734 19401 MYSFVNDKF True PC9_epitope_Rep1 1149.5164817514499 1149.5153899358602 79.438 2 0.2189276927534375 0.00036105427849320016 0.9438714419765777 ['ENSG00000163874|ENST00000373087|ZC3H12A', 'nc|ENSG00000102053|Q5HYM0-2|ZC3H12B', 'ENSG00000102053|ENST00000338957|ZC3H12B', 'ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 23738 18938 EYIPKWEQF True PC9_epitope_Rep4 1238.5971746003 1238.5960699358602 80.932 2 0.21890832200176663 0.00036105427849320016 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 140272 13920 YYAEVETRI True PC9_epitope_Rep1 1142.5607890915799 1142.5596899358602 58.379 2 0.21889836438899668 0.00036105427849320016 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 130955 16332 VVITEKGISDL True PC9_epitope_Rep4 1172.66525416012 1172.66414993586 70.784 2 0.21889340468271093 0.00036105427849320016 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 53091 7306 KSDVEAIFSK True NCI_RA007_Epitope_Rep3 1122.5920892198599 1122.59044490379 35.849 3 0.21889280889645443 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 106868 16102 SYIEHIFEI True NCI_RA007_Epitope_Rep5 1149.57062549929 1149.5695299358601 68.665 2 0.21886725186349984 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 108387 10387 TEDWDQPVA True H1975_Epitope_Rep2 1059.45090428943 1059.45037496793 44.965 1 0.21885182750570192 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 74897 9020 NLQYYDISAK True H1975_Epitope_Rep1 1213.5979028762902 1213.5968099358602 39.602 2 0.21884526475478916 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 23877 6878 EYMKHTRLF True NCI_RA007_Epitope_Rep1 1223.6121134717898 1223.61046490379 30.758 3 0.21884055380224046 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 12228 9199 DIQIEQLNR True H1975_Epitope_Rep1 1127.5934862021902 1127.5923899358602 40.291 2 0.2188269483280237 0.00036105427849320016 0.9438714419765777 ['ENST00000514611.1_1_5:139625581-139680122:-|nuORF', 'ENST00000507185.1_1_5:139661015-139682658:-|nuORF', 'ENSG00000113068|ENST00000261813|PFDN1'] 40454 9662 HSDPSILGY True H1975_Epitope_Rep1 987.46616043075 987.46506993586 42.09 2 0.21882629663198663 0.00036105427849320016 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 101646 19123 SPFPDIPKV True PC9_epitope_Rep2 998.54368247546 998.54258993586 78.928 2 0.2188260090900257 0.00036105427849320016 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF', 'ENST00000446672.2_1_13:19955792-19968894:+|nuORF'] 43307 10309 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 44.983 2 0.2188202929783202 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 32027 9037 GEVFKTYNV True H1975_Epitope_Rep3 1055.5287606873098 1055.52766993586 39.748 2 0.2188192088585867 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 11834 16164 DHMRFISEL True PC9_epitope_Rep4 1146.54917886206 1146.54754490379 70.116 3 0.218795842644016 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 95477 20567 SAMEVVPAL True PC9_epitope_Rep1 915.4735543103099 915.47244993586 83.924 2 0.21878545132623858 0.00036105427849320016 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 36404 16017 GVIDLIFEK True NCI_RA007_Epitope_Rep4 1032.58554728744 1032.5844499358602 69.48 2 0.21878349381719545 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 104226 11135 SSDNIMVQY True H1975_Epitope_Rep1 1055.45936079815 1055.45826993586 47.798 2 0.21877842870271338 0.00036105427849320016 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 124322 13424 VLDPYLLKY True H1975_Epitope_Rep1 1122.63249747986 1122.6314099358601 56.748 2 0.21877353881332795 0.00036105427849320016 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 107052 21394 SYLPLAHMF True PC9_epitope_Rep1 1077.53173789277 1077.53064993586 87.125 2 0.2187672590435427 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 34764 10866 GQSELASRLTL True NCI_RA007_Epitope_Rep5 1173.6353510141698 1173.63424993586 48.431 2 0.2187666273256138 0.00036105427849320016 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 14267 5237 DSYVGDEAQSK True PC9_epitope_Rep3 1197.51496109797 1197.5138699358602 25.224 2 0.21874581841052113 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 134126 16362 WRDPDEPVL True PC9_epitope_Rep1 1125.5454733806098 1125.54436993586 67.756 2 0.2187306174009912 0.00036105427849320016 0.9438714419765777 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000487654.5_1_1:46033819-46034819:+|nuORF'] 25468 12287 FENGNRSWFY True H1975_Epitope_Rep2 1318.57308511078 1318.57198993586 52.345 2 0.21871065030247863 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5', 'AGBL5|p.E255Dfs*4|1|0.21|ENSG00000084693|chr2:27055105-27055106|GG/-|frameshift_variant', 'ENST00000477136.5_1_2:27275826-27278122:+|nuORF', 'ENST00000489683.5_1_2:27275826-27279072:+|nuORF', 'nc|ENSG00000084693|Q8NDL9-3|AGBL5'] 24352 12496 FADQEVRSL True PC9_epitope_Rep5 1063.52982331647 1063.5287299358602 53.064 2 0.2187013966158544 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 93950 9465 RVLQALEGLK True NCI_RA007_Epitope_Rep4 1125.6869926642098 1125.6858899358601 43.264 2 0.21868881975470678 0.00036105427849320016 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 48359 5133 KEAESSPFVER True NCI_RA007_Epitope_Rep2 1277.62518025329 1277.62354490379 24.59 3 0.21868742564296448 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 54407 8785 KYSLIKGNF True NCI_RA007_Epitope_Rep2 1068.59678067748 1068.59568993586 38.818 2 0.21868734943387977 0.00036105427849320016 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 106858 16491 SYIEHIFEI True NCI_RA007_Epitope_Rep2 1149.57062549929 1149.5695299358601 68.874 2 0.21867621424964098 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 54227 21987 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 89.394 2 0.21867348959412428 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 7865 6997 ATANQIILK True NCI_RA007_Epitope_Rep1 970.58113061334 970.58002993586 31.215 2 0.218672152784506 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 23925 10441 EYNNNFHVL True NCI_RA007_Epitope_Rep4 1148.5250722892001 1148.5239699358601 47.012 2 0.21866669180881512 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 72736 19308 MYSFVNDKF True PC9_epitope_Rep5 1149.5164817514499 1149.5153899358602 79.313 2 0.21866156237790746 0.00036105427849320016 0.9438714419765777 ['ENSG00000163874|ENST00000373087|ZC3H12A', 'nc|ENSG00000102053|Q5HYM0-2|ZC3H12B', 'ENSG00000102053|ENST00000338957|ZC3H12B', 'ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 28408 11201 FSDVNMQEY True H1975_Epitope_Rep2 1131.4542754177098 1131.45377496793 48.124 1 0.21865936252831109 0.00036105427849320016 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 9700 15549 AYIERMNYI True PC9_epitope_Rep4 1171.5695799534699 1171.56848993586 67.732 2 0.2186578997527715 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'ENSG00000176105|ENST00000314574|YES1'] 14926 15466 DYLEVAKHF True PC9_epitope_Rep4 1120.55530978832 1120.5542099358602 67.419 2 0.21865698530612032 0.00036105427849320016 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 54161 14397 KYNLINEYF True NCI_RA007_Epitope_Rep5 1202.5971746003 1202.5960699358602 62.061 2 0.2186529745934875 0.00036105427849320016 0.9438714419765777 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 104860 15132 STEQIPILY True H1975_Epitope_Rep1 1062.5597264624198 1062.5586299358602 63.462 2 0.21864955445654607 0.00036105427849320016 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 255 13295 AAGGVGSIVRV True PC9_epitope_Rep5 984.5716285588 984.57052993586 56.151 2 0.2186431464040983 0.00036105427849320016 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 109256 10212 TGAAPIIDVVR True NCI_RA007_Epitope_Rep5 1110.6397081186199 1110.6386099358601 45.912 2 0.21864141399674716 0.00036105427849320016 0.9438714419765777 ['ENSG00000166441|ENST00000314138|RPL27A'] 115245 13796 TVDEHVWFY True H1975_Epitope_Rep1 1194.53457434374 1194.53346993586 58.209 2 0.21863865576985717 0.00036105427849320016 0.9438714419765777 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 104795 8066 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.5331499358601 35.973 2 0.218620515783239 0.00036105427849320016 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 6649 10758 AQAEVYKEL True PC9_epitope_Rep1 1049.53932537101 1049.53822993586 46.268 2 0.2186128798399575 0.00036105427849320016 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 75345 14695 NQAKYIPEL True PC9_epitope_Rep2 1074.57095985246 1074.5698699358602 61.789 2 0.2186062221119667 0.00036105427849320016 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 98283 4643 SIFKQPVTK True NCI_RA007_Epitope_Rep3 1046.61243074162 1046.61132993586 25.186 2 0.2185898404893669 0.00036105427849320016 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 45370 9778 ISDLIRDSY True H1975_Epitope_Rep3 1080.54513902744 1080.5440499358601 42.634 2 0.21858031741256548 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 42375 9957 IENGHIFTV True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 43.29 2 0.2185797743121517 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'SPAG16-CUL3|1|fusion'] 140123 19507 YVQDFLNHL True PC9_epitope_Rep4 1147.56620882519 1147.5651099358602 83.152 2 0.21857835767092765 0.00036105427849320016 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 14953 15152 DYQALRTSI True PC9_epitope_Rep1 1065.54547338061 1065.54436993586 63.103 2 0.21857714202867706 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 52592 16927 KPYNVYITV True PC9_epitope_Rep3 1095.59644632431 1095.5953499358602 70.266 2 0.2185740070858454 0.00036105427849320016 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 6844 18633 AQIEDLQVKL True PC9_epitope_Rep5 1155.6499384491499 1155.6488499358602 76.697 2 0.21857391926739692 0.00036105427849320016 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 115152 22088 TVADVVLWSV True PC9_epitope_Rep4 1087.59136094387 1087.59026993586 93.178 2 0.21856444973179118 0.00036105427849320016 0.9438714419765777 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 98519 17695 SILHDVVEV True PC9_epitope_Rep2 1009.54441075145 1009.54330993586 73.344 2 0.21855822073634318 0.00036105427849320016 0.9438714419765777 ['ENST00000572148.1_1_17:4863453-4863890:-|nuORF', 'ENSG00000091640|ENST00000206020|SPAG7'] 37569 11631 GYSEHFVEF True NCI_RA007_Epitope_Rep3 1113.47672511445 1113.47562993586 52.872 2 0.218552400042306 0.00036105427849320016 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 108720 4484 TEM[Oxidation]NGRIVAT True H1975_Epitope_Rep2 1106.5390084816197 1106.5379099358602 22.361 2 0.21855031338522415 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 54382 10703 KYQKGFSLW True NCI_RA007_Epitope_Rep1 1155.6076797143498 1155.60658993586 45.623 2 0.21853401129820613 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 53914 5035 KYIHSANVL True NCI_RA007_Epitope_Rep3 1043.57637958607 1043.5752899358602 26.799 2 0.2185329458929036 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 8103 8427 ATELVKPGVY True H1975_Epitope_Rep2 1075.5913609438699 1075.59026993586 37.366 2 0.21852812966813465 0.00036105427849320016 0.9438714419765777 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'RALGAPA1|p.C1295Lfs*2|1|0.4|ENSG00000174373|chr14:35655901-35655902|-/A|frameshift_variant'] 127400 15443 VQQTVQDLFGR True PC9_epitope_Rep4 1289.67279915205 1289.67170993586 67.334 2 0.21852801878752004 0.00036105427849320016 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 103911 14182 SRMDGEGQLTL True PC9_epitope_Rep5 1205.5710365054497 1205.56992993586 59.559 2 0.2185175121569973 0.00036105427849320016 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 26360 12763 FIGNLNTLVVK True H1975_Epitope_Rep3 1216.71795843932 1216.7168699358601 54.307 2 0.21851486719801397 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 131054 21553 VVLPLELKL True PC9_epitope_Rep1 1022.6739683690199 1022.6728699358599 87.725 2 0.21851239485694682 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 80267 15880 PLDQTPLFY True H1975_Epitope_Rep3 1092.54916177872 1092.5480699358602 66.531 2 0.2185099607145289 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000514312.1_1_5:10415712-10417549:+|nuORF', 'ENST00000505253.1_1_5:10413496-10422048:+|nuORF'] 89503 7403 REQQLAEIEA True H1975_Epitope_Rep2 1185.5989655054498 1185.5978699358602 33.418 2 0.2184981590249899 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2'] 75507 20201 NQITQLESL True PC9_epitope_Rep3 1044.54513902744 1044.5440499358601 82.963 2 0.21849286531095208 0.00036105427849320016 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 71704 4781 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 23.479 2 0.2184864986779085 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 96089 10035 SEDLPLNISR True H1975_Epitope_Rep3 1142.59315184902 1142.5920499358601 43.635 2 0.21848333890850571 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 18302 12653 EITALAPSTMK True PC9_epitope_Rep5 1160.61111041228 1160.61000993586 53.672 2 0.21848296912945092 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77270 17205 NYIRITSEI True PC9_epitope_Rep3 1107.59242357303 1107.5913299358601 71.335 2 0.21848209817330996 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 105365 18801 STYKFFEVI True PC9_epitope_Rep6 1132.580461907 1132.57936993586 84.958 2 0.21847850126507076 0.00036105427849320016 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 83179 21666 PYTPFLTEL True PC9_epitope_Rep4 1079.55391280599 1079.55280993586 91.533 2 0.21847773322913414 0.00036105427849320016 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 13678 17911 DQELYFFHEL True NCI_RA007_Epitope_Rep1 1339.6084675599898 1339.60736993586 73.808 2 0.21847739134256872 0.00036105427849320016 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 113764 5972 TRDPQFQKL True PC9_epitope_Rep4 1131.6036569630699 1131.6020249037902 29.917 3 0.21847422603659503 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 41017 16772 HYGLPVVV True PC9_epitope_Rep4 882.49633836022 882.49524993586 72.48 2 0.2184601591268225 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 107955 13510 TAYWKELSL True H1975_Epitope_Rep3 1109.57571087973 1109.57460993586 57.244 2 0.21845710727692563 0.00036105427849320016 0.9438714419765777 ['ENST00000579880.5_1_17:8339285-8348278:+|nuORF', 'ENST00000580738.5_1_17:8339285-8349209:+|nuORF', 'nc|ENSG00000166579|Q9GZM8-3|NDEL1', 'ENSG00000166579|ENST00000334527|NDEL1', 'nc|ENSG00000166579|Q9GZM8-2|NDEL1'] 96948 9985 SEVEVIHVP True H1975_Epitope_Rep1 1007.52876068731 1007.52766993586 43.342 2 0.21844323689818917 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 109984 13134 THSNTIVVSL True PC9_epitope_Rep4 1069.57677350889 1069.57566993586 58.414 2 0.21842799199585786 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 68879 9059 LVEIADTVPK True H1975_Epitope_Rep1 1083.6175756917098 1083.61646993586 39.754 2 0.21842792903467467 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENSG00000137040|ENST00000259569|RANBP6'] 64076 9101 LQDYFDGNLKR True NCI_RA007_Epitope_Rep1 1367.68336383575 1367.68171490379 39.403 3 0.2184272709587734 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 54313 20929 KYPSPFFVF True PC9_epitope_Rep4 1130.5800679841798 1130.5789699358602 88.663 2 0.21842506097907513 0.00036105427849320016 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 53075 10141 KSDLFFHDY True H1975_Epitope_Rep2 1170.53457434374 1170.53346993586 44.007 2 0.2184219475536871 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 47515 14044 IYLLIHNNF True NCI_RA007_Epitope_Rep5 1145.62332977849 1145.62222993586 60.711 2 0.21841651531938003 0.00036105427849320016 0.9438714419765777 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 114891 8539 TTEESLRNYY True H1975_Epitope_Rep3 1274.5778957077 1274.57678993586 37.833 2 0.21841409110748855 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 127219 9379 VQIEEVRQV True PC9_epitope_Rep6 1098.6033226098998 1098.6022299358601 46.272 2 0.21841290170559707 0.00036105427849320016 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 4817 5423 ALEQQVEEM[Oxidation]K True NCI_RA007_Epitope_Rep2 1219.5754535599897 1219.57434993586 25.714 2 0.21838849103794714 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 17756 6252 EHTQTVSQL True PC9_epitope_Rep1 1041.50908787189 1041.50798993586 28.861 2 0.218384022901618 0.00036105427849320016 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 29217 16558 FVDDYTVRV True PC9_epitope_Rep1 1112.55022440788 1112.54912993586 68.513 2 0.2183833784505166 0.00036105427849320016 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 40675 4729 HTLNQIDSVK True NCI_RA007_Epitope_Rep4 1153.6091362663299 1153.60802993586 24.62 2 0.21837582928514968 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 138742 6538 YSAPQHDYY True H1975_Epitope_Rep2 1142.46688870674 1142.4657899358601 30.059 2 0.21836496226895222 0.00036105427849320016 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 54138 18053 KYNANFVTF True PC9_epitope_Rep3 1102.54474510462 1102.54364993586 74.64 2 0.2183624650452735 0.00036105427849320016 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 61461 18666 LLFEGEKITI True PC9_epitope_Rep6 1161.6645258841297 1161.6634299358602 84.442 2 0.21835046516684709 0.00036105427849320016 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000168255|ENST00000513506|POLR2J3'] 106926 7858 SYISRTNQL True PC9_epitope_Rep6 1080.5563724174801 1080.55526993586 39.628 2 0.2183462150926472 0.00036105427849320016 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 84687 17838 QHFDSVMQL True PC9_epitope_Rep1 1103.5069796969099 1103.50588993586 73.408 2 0.2183343896192077 0.00036105427849320016 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 132429 12560 VYNPTRNEW True PC9_epitope_Rep5 1177.55162139021 1177.5505299358601 53.311 2 0.21833332165087566 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 29282 10305 FVDKNNDLLY True H1975_Epitope_Rep2 1239.61355294043 1239.61244993586 44.644 2 0.21833048594871324 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 131685 18434 VWMRSPLSTF True PC9_epitope_Rep6 1222.61686449906 1222.61576993586 83.549 2 0.2183276935094484 0.00036105427849320016 0.9438714419765777 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF', 'chr15:60364523-60370591|201|71.34|0.76|6.56|-|0|ANXA2,None|1', 'chr15:60364523-60366446|150|115.17|0.14|9.65|-|0|TE_info:SVA_E,SVA_E_dup534,SVA,Retroposon,donor,+,60366446,60366898|ANXA2,None|4'] 38819 7347 HIDSANALY True H1975_Epitope_Rep3 1002.4770594676199 1002.47596993586 33.237 2 0.21831890875756974 0.00036105427849320016 0.9438714419765777 ['ENSG00000105186|ENST00000306065|ANKRD27'] 115760 14399 TVLQKMNEI True PC9_epitope_Rep3 1074.57433098074 1074.5732299358601 60.483 2 0.21831352626046666 0.00036105427849320016 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 84066 8832 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 38.979 2 0.21829823388033912 0.00036105427849320016 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 54130 11588 KYNANFVTF True NCI_RA007_Epitope_Rep4 1102.54474510462 1102.54364993586 51.521 2 0.21829486300576173 0.00036105427849320016 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 135840 11090 YEQLSSEALEA True H1975_Epitope_Rep1 1238.56666231766 1238.5655699358601 47.621 2 0.2182940817593401 0.00036105427849320016 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 130505 6115 VTVVDVNESR True NCI_RA007_Epitope_Rep5 1116.5775017848798 1116.57640993586 30.201 2 0.21829386258969374 0.00036105427849320016 0.9438714419765777 ['ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-2|UGDH'] 107139 13788 SYM[Oxidation]LVNENRF True PC9_epitope_Rep4 1287.59177233047 1287.5906699358602 60.931 2 0.21829066389549837 0.00036105427849320016 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 7824 8283 ATAEDFNKV True PC9_epitope_Rep5 993.47672511445 993.47562993586 36.799 2 0.21828571845826467 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 25500 4702 FEQAGEPRQP True H1975_Epitope_Rep3 1157.5465360097699 1157.54542993586 23.211 2 0.21828027354439306 0.00036105427849320016 0.9438714419765777 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 131833 19663 VYAQVARLF True PC9_epitope_Rep1 1065.5971150306498 1065.5960099358601 80.458 2 0.21827920378104834 0.00036105427849320016 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 68716 9133 LVDEPQNLIK True H1975_Epitope_Rep1 1167.6499384491499 1167.6488499358602 40.036 2 0.21825050451525602 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 63709 13619 LPQLPITNFSR True H1975_Epitope_Rep3 1284.71902106848 1284.7179299358602 57.673 2 0.21823481034283587 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 106995 19440 SYLESFYHM True PC9_epitope_Rep4 1175.49574630687 1175.49464993586 82.889 2 0.21823015621853617 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 116515 17663 TYDYNFHSF True PC9_epitope_Rep2 1192.48253877088 1192.4814499358602 73.221 2 0.21822922825395338 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 109577 10159 THDDSHLVSL True PC9_epitope_Rep1 1122.5305515924601 1122.5289149037899 43.952 3 0.2182287618070934 0.00036105427849320016 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 45736 21963 ISMPDFDLHL True PC9_epitope_Rep1 1186.5692456003 1186.5681499358602 89.299 2 0.21822504367582596 0.00036105427849320016 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 42278 14681 IEILSDVQLIK True H1975_Epitope_Rep1 1269.75440351769 1269.7533099358602 61.686 2 0.2182245277541902 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0'] 76104 17789 NRPEFITEF True PC9_epitope_Rep4 1151.56112344475 1151.56002993586 76.453 2 0.21822136839524126 0.00036105427849320016 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 125807 6872 VNLPINGNGKQ True NCI_RA007_Epitope_Rep4 1152.62512068364 1152.62402993586 33.051 2 0.21821984595035157 0.00036105427849320016 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 86621 18934 QRDVLLTEL True PC9_epitope_Rep5 1085.60807363717 1085.6069699358602 77.853 2 0.21821560966256798 0.00036105427849320016 0.9438714419765777 ['ENSG00000124659|ENST00000372876|TBCC'] 94504 12788 RYIANTVEL True PC9_epitope_Rep4 1077.58185888933 1077.5807699358602 57.052 2 0.21821299116921 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 45380 19073 ISDPFYGPWY True H1975_Epitope_Rep2 1243.55497543515 1243.5538699358601 79.175 2 0.21820021997546427 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000157600|Q5U3C3-2|TMEM164', 'ENSG00000157600|ENST00000372068|TMEM164'] 73777 17927 NHDFQALAL True PC9_epitope_Rep5 1027.50869394907 1027.50758993586 73.973 2 0.21818549508800783 0.00036105427849320016 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 53879 14090 KYIDQKFVL True PC9_epitope_Rep2 1152.6542955536 1152.65263490379 59.471 3 0.21818113207970108 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 76487 10910 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4603699358602 46.996 2 0.21817845851868042 0.00036105427849320016 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 27715 20885 FQDPVPLTV True PC9_epitope_Rep2 1014.5385970950199 1014.53750993586 85.777 2 0.21816462600496678 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 120236 17612 VFNPYTEFK True PC9_epitope_Rep1 1143.5600608155898 1143.5589699358602 72.537 2 0.21816362734334785 0.00036105427849320016 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2'] 56574 10507 LDVTSVEDYK True NCI_RA007_Epitope_Rep1 1167.5659340416698 1167.5648299358602 44.852 2 0.21816224649886504 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000432974.1_1_13:79483649-79483910:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 11360 11662 DFEQPLAISR True NCI_RA007_Epitope_Rep1 1174.59823722946 1174.5971499358602 49.336 2 0.2181616935607504 0.00036105427849320016 0.9438714419765777 ['ENST00000477757.5_1_10:97028616-97050708:-|nuORF', 'PDLIM1|p.V196Ffs*11|1|0.25|ENSG00000107438|chr10:95247314-95247314|C/-|frameshift_variant', 'ENSG00000107438|ENST00000329399|PDLIM1'] 26955 22905 FLITILDHL True PC9_epitope_Rep1 1083.63283183303 1083.6317299358602 92.902 2 0.21816155255604827 0.00036105427849320016 0.9438714419765777 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2', 'nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1'] 136531 14094 YHQPAPIAQL True PC9_epitope_Rep5 1136.5978433066398 1136.59674993586 59.223 2 0.21815068901320567 0.00036105427849320016 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-4|KHDC4', 'ENST00000466713.1_1_1:155896424-155904164:-|nuORF', 'KIAA0907-UBQLN4|1|fusion', 'nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 133024 13799 VYVQHPITF True PC9_epitope_Rep6 1102.5811306133398 1102.58002993586 64.879 2 0.21814833675128067 0.00036105427849320016 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 43358 19226 IHLIDPNTL True PC9_epitope_Rep3 1034.5760452329 1034.57494993586 79.173 2 0.21814431415071917 0.00036105427849320016 0.9438714419765777 ['ENSG00000169251|ENST00000351193|NMD3', 'NMD3|p.E344Kfs*10|1|0.18|ENSG00000169251|chr3:161246345-161246345|G/-|frameshift_variant', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 7505 6084 ASEIAVGHQY True H1975_Epitope_Rep2 1073.51417325233 1073.5130699358601 28.377 2 0.21814072527354947 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 9141 12048 AVLYQPLFDK True NCI_RA007_Epitope_Rep3 1192.6492101731599 1192.64810993586 54.513 2 0.21813451810490103 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 25177 10587 FDVSGYPTLK True H1975_Epitope_Rep1 1125.57062549929 1125.5695299358601 45.676 2 0.21813154693057132 0.00036105427849320016 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 6585 18266 APWKPTWPA True PC9_epitope_Rep1 1052.5443511817998 1052.54324993586 75.05 2 0.2181309564510599 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150687|O95084-2|PRSS23', 'ENSG00000150687|ENST00000280258|PRSS23'] 132479 8728 VYPDGIRHI True PC9_epitope_Rep2 1068.5716285587998 1068.5705299358601 38.933 2 0.21811629487548626 0.00036105427849320016 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 96630 5843 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 27.463 2 0.218107756270715 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 116701 19651 TYKDYVDLF True PC9_epitope_Rep4 1162.55464108198 1162.55354993586 83.705 2 0.218106200655018 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 123086 19095 VHAPPMQLGF True PC9_epitope_Rep1 1095.5535359665098 1095.5524299358601 78.239 2 0.21810494502778027 0.00036105427849320016 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 76081 15301 NRMDYYNAL True PC9_epitope_Rep5 1158.51279335334 1158.5116899358602 63.865 2 0.2181034132010252 0.00036105427849320016 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 138494 20176 YRIESYWTY True PC9_epitope_Rep1 1279.5873381925899 1279.58624993586 82.436 2 0.21809897458724561 0.00036105427849320016 0.9438714419765777 ['ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 91491 4701 RNVSTGDVNVE True NCI_RA007_Epitope_Rep5 1188.5734790335998 1188.5723899358602 24.769 2 0.2180952568015934 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 38563 19067 HHFEWIQKL True PC9_epitope_Rep3 1236.64037682496 1236.63874490379 78.564 3 0.21809496581621296 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 39977 13398 HQQSIPAVL True PC9_epitope_Rep5 991.5450794577898 991.5439899358599 56.552 2 0.2180911936306528 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 88097 5796 QVVSPGVYK True NCI_RA007_Epitope_Rep4 975.5389314481898 975.53782993586 28.918 2 0.21808218871035903 0.00036105427849320016 0.9438714419765777 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF', 'ENST00000405135.5_1_22:50968911-50969740:-|nuORF', 'ENSG00000177989|ENST00000329363|ODF3B'] 94545 19304 RYINNPLLI True PC9_epitope_Rep2 1114.6498788795 1114.6487899358601 79.627 2 0.2180808564973338 0.00036105427849320016 0.9438714419765777 ['TTLL5-RGS6|2|fusion', 'TTLL5-RGS6|5|fusion', 'TTLL5-RGS6|1|fusion', 'TTLL5-RGS6|8|fusion', 'TTLL5-RGS6|4|fusion', 'TTLL5-RGS6|6|fusion', 'TTLL5-RGS6|7|fusion', 'TTLL5-RGS6|3|fusion', 'ENSG00000119685|ENST00000298832|TTLL5', 'TTLL5|p.I678Sfs*12|1|0.11|ENSG00000119685|chr14:75771750-75771756|ATAGCAT/-|frameshift_variant', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 102633 15678 SQDARFYAL True PC9_epitope_Rep3 1069.51925863277 1069.5181699358602 65.448 2 0.21807614946554366 0.00036105427849320016 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 47846 20167 IYTDMGRFTI True PC9_epitope_Rep1 1215.5957947013098 1215.59468993586 82.402 2 0.21807242794696052 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA', 'NAPB|p.A120S|2|0.22|ENSG00000125814|chr20:23394984-23394984|C/A|missense_variant', 'ENST00000602082.5_1_19:47996374-48018112:-|nuORF', 'ENST00000596892.5_1_19:47996374-48000675:-|nuORF', 'ENST00000602174.5_1_19:47996374-48018112:-|nuORF', 'ENST00000601927.1_1_19:47996374-47999001:-|nuORF', 'ENST00000594288.5_1_19:47996374-48015977:-|nuORF', 'ENST00000597778.5_1_19:47996282-47999001:-|nuORF', 'ENSG00000125814|ENST00000377026|NAPB', 'nc|ENSG00000125814|Q9H115-2|NAPB'] 91167 19204 RLPPDTLLQQV True PC9_epitope_Rep5 1278.7295857521801 1278.7284899358601 78.908 2 0.21806763343347313 0.00036105427849320016 0.9438714419765777 ['ENSG00000169733|ENST00000310496|RFNG', 'ENST00000582478.5_1_17:80006905-80007747:-|nuORF', 'ENST00000580953.5_1_17:80006604-80007747:-|nuORF'] 40147 7732 HRDYETATL True PC9_epitope_Rep1 1104.51998690876 1104.5188899358602 34.562 2 0.218064214417685 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 11593 10787 DGYEFKFPNR True NCI_RA007_Epitope_Rep1 1271.5934862021898 1271.5918349037902 45.953 3 0.2180578499150931 0.00036105427849320016 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 70503 12315 LYTEKFEEF True NCI_RA007_Epitope_Rep1 1204.5652057656796 1204.5641099358602 51.874 2 0.2180545956398979 0.00036105427849320016 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 25976 15632 FGYPDPTYL True H1975_Epitope_Rep2 1071.49131254943 1071.4907749679298 65.282 1 0.2180379922489372 0.00036105427849320016 0.9438714419765777 ['ENSG00000178498|ENST00000337737|DTX3', 'nc|ENSG00000178498|Q8N9I9-2|DTX3'] 134861 14138 YAAELIERV True PC9_epitope_Rep6 1062.57095985246 1062.5698699358602 66.252 2 0.21803264327381824 0.00036105427849320016 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 470 17565 AAMNPDAVLRV True PC9_epitope_Rep1 1155.60702809135 1155.60592993586 72.357 2 0.2180310714849363 0.00036105427849320016 0.9438714419765777 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-3|BPNT1', 'nc|ENSG00000162813|O95861-4|BPNT1'] 105404 20205 SVADYFKQI True PC9_epitope_Rep5 1069.54441075145 1069.5433099358602 82.765 2 0.21802886953262718 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 55180 6804 LAPEYEAAATR True NCI_RA007_Epitope_Rep1 1190.59315184902 1190.5920499358601 30.474 2 0.21801763334836696 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 75147 7579 NNDIM[Oxidation]LIK True H1975_Epitope_Rep3 975.50591744819 975.50480993586 34.133 2 0.21801447961812212 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 48574 10109 KEIDAYIVQA True H1975_Epitope_Rep1 1148.607739284 1148.60664993586 43.821 2 0.21800712762506588 0.00036105427849320016 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF'] 105364 20974 STYKFFEVI True PC9_epitope_Rep5 1132.580461907 1132.57936993586 85.736 2 0.21800297342471295 0.00036105427849320016 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 22310 16087 ETEEDKFLLLY True H1975_Epitope_Rep2 1398.6918628307799 1398.69076993586 67.085 2 0.21800030756351232 0.00036105427849320016 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 140547 19699 YYLNDLERI True PC9_epitope_Rep2 1197.6029882567298 1197.60188993586 81.16 2 0.2179999840938242 0.00036105427849320016 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 89288 5224 RELHLMRNEA True NCI_RA007_Epitope_Rep4 1267.6455388583897 1267.6438949037902 26.631 3 0.2179931961665836 0.00036105427849320016 0.9438714419765777 ['ENSG00000117614|ENST00000236273|SYF2'] 9267 5756 AVQTAAKELLK True NCI_RA007_Epitope_Rep3 1170.6972229947398 1170.69556490379 29.622 3 0.21799092402805414 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000123992|Q9ULA0-2|DNPEP', 'ENSG00000123992|ENST00000273075|DNPEP', 'ENST00000460963.5_1_2:220250088-220252486:-|nuORF', 'ENST00000430206.5_1_2:220251659-220252065:-|nuORF', 'ENST00000523527.5_1_2:220250965-220252516:-|nuORF'] 104787 8554 STDPREALQY True H1975_Epitope_Rep1 1178.5567663402999 1178.5556699358601 37.829 2 0.21798605801945883 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 116661 16971 TYIPVPAKI True PC9_epitope_Rep1 1000.5957180483199 1000.59462993586 70.103 2 0.2179731459968554 0.00036105427849320016 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 40150 5987 HRDYETATL True PC9_epitope_Rep2 1104.51998690876 1104.5188899358602 28.416 2 0.2179665853888078 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 67481 7346 LTEIIASR True NCI_RA007_Epitope_Rep2 901.5232813840499 901.52218993586 33.197 2 0.21795789392942622 0.00036105427849320016 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 136488 15047 YHILGNEM True PC9_epitope_Rep5 975.44840219163 975.44730993586 62.883 2 0.21795144302721572 0.00036105427849320016 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 11996 10377 DHYLGKEMV True PC9_epitope_Rep1 1090.5117307241799 1090.5106299358602 44.799 2 0.21794319185163152 0.00036105427849320016 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 23929 15015 EYNNNFHVL True PC9_epitope_Rep2 1148.5250722892001 1148.5239699358601 63.009 2 0.21794225904612155 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 91283 7971 RLYDAYELK True NCI_RA007_Epitope_Rep4 1169.6080736371698 1169.6069699358602 37.415 2 0.2179395281102384 0.00036105427849320016 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 22189 12056 ETDEKDFYLY True H1975_Epitope_Rep1 1321.5714133449299 1321.57030993586 51.385 2 0.2179318158050642 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 89736 6979 REYQELM[Oxidation]SV True NCI_RA007_Epitope_Rep3 1169.5386741284499 1169.5375699358601 34.561 2 0.2179236521554309 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 139232 9377 YTADGKEVLEY True H1975_Epitope_Rep2 1286.6030478263801 1286.6019499358601 41.031 2 0.21792320595595976 0.00036105427849320016 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 114469 5196 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 25.058 3 0.21791922419591991 0.00036105427849320016 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 96950 10181 SEVEVIHVP True H1975_Epitope_Rep1 1007.52876068731 1007.52766993586 44.101 2 0.21790990449937894 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 48659 4895 KELEKQLVA True NCI_RA007_Epitope_Rep4 1056.6179100448799 1056.6168099358601 25.28 2 0.21790464953081495 0.00036105427849320016 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17', 'ENST00000530469.1_1_11:43400830-43413141:+|nuORF'] 60656 11777 LITPAVVSER True PC9_epitope_Rep4 1083.62880908175 1083.6277099358601 53.067 2 0.21790454500228082 0.00036105427849320016 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 84643 13977 QHEEFVTSL True PC9_epitope_Rep2 1088.51383889916 1088.51274993586 59.035 2 0.21790363463415638 0.00036105427849320016 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 77220 20954 NYIEFTRIL True PC9_epitope_Rep3 1167.62880908175 1167.6277099358601 85.877 2 0.21790309591355758 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 28911 12562 FTEEQAVLY True H1975_Epitope_Rep2 1098.5233409536997 1098.5222499358601 53.414 2 0.2179024707743036 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 14239 7342 DSYSSSRSDLY True H1975_Epitope_Rep3 1278.5364248185401 1278.53532993586 33.218 2 0.21789757370801288 0.00036105427849320016 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 117009 16374 TYQDIQNTI True PC9_epitope_Rep1 1094.52440358286 1094.5233099358602 67.805 2 0.21789676651102 0.00036105427849320016 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 75374 11402 NQDDSILKV True PC9_epitope_Rep6 1030.5294889632999 1030.52838993586 54.916 2 0.21788819250860766 0.00036105427849320016 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 26706 7731 FLDESRSTQY True H1975_Epitope_Rep2 1244.567331024 1244.56622993586 34.689 2 0.21787874000499985 0.00036105427849320016 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 124325 13643 VLDPYLLKY True H1975_Epitope_Rep2 1122.63249747986 1122.6314099358601 57.618 2 0.21787467501091579 0.00036105427849320016 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 52078 21719 KLLEPVLLL True PC9_epitope_Rep3 1036.68961843316 1036.68852993586 88.836 2 0.2178742745706004 0.00036105427849320016 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16'] 46222 9520 ITDPDPDIRY True H1975_Epitope_Rep2 1203.57716743171 1203.57606993586 41.59 2 0.2178725213883449 0.00036105427849320016 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 115259 11387 TVDGVVFHY True H1975_Epitope_Rep2 1035.50254593947 1035.5014499358601 48.85 2 0.21785741636194783 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'VCAN-CNTNAP3B|1|fusion'] 136375 17423 YHDINVYSL True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 72.271 2 0.2178480533417094 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 95110 11281 RYVEIVSQF True NCI_RA007_Epitope_Rep3 1139.5975089534697 1139.59640993586 51.485 2 0.2178443262362637 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 87691 13132 QVDPLSALKY True H1975_Epitope_Rep2 1132.6128246644398 1132.61172993586 55.634 2 0.21783615895218048 0.00036105427849320016 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 120106 11606 VFIDKQTNL True PC9_epitope_Rep4 1076.5866099166 1076.58550993586 52.403 2 0.217825642539482 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 85375 17738 QLEDELVSLQK True PC9_epitope_Rep3 1300.6874461566802 1300.68634993586 73.426 2 0.2178214580326568 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 44342 19786 IMLEALERV True PC9_epitope_Rep2 1072.59506642532 1072.59396993586 81.496 2 0.2178206999219953 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 66157 13734 LSPEELLLR True H1975_Epitope_Rep1 1068.6179100448799 1068.6168099358601 57.968 2 0.21781757735225946 0.00036105427849320016 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'ENSG00000120756|ENST00000457734|PLS1'] 105581 6483 SVEAAAELSAK True NCI_RA007_Epitope_Rep2 1074.55570371114 1074.55460993586 29.827 2 0.21781503683533374 0.00036105427849320016 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 127012 8197 VPYEIQKGQA True PC9_epitope_Rep5 1131.59242357303 1131.5913299358601 36.469 2 0.2178107072767192 0.00036105427849320016 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 88462 8574 QYVTQINRL True NCI_RA007_Epitope_Rep3 1133.61930702721 1133.61820993586 40.797 2 0.21780981045730513 0.00036105427849320016 0.9438714419765777 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 35445 7041 GTEDELDKY True H1975_Epitope_Rep2 1068.46113461996 1068.4600299358601 32.008 2 0.21777185602903698 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 40357 6709 HRTELETKL True PC9_epitope_Rep1 1125.61422164677 1125.61258490379 30.609 3 0.2177708542441493 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 94116 13565 RWFDKSFTF True NCI_RA007_Epitope_Rep5 1232.59784330664 1232.59674993586 58.865 2 0.21776724637777173 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 22269 3599 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 18.853 2 0.2177597657030783 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 114177 6624 TRSTFSTNY True PC9_epitope_Rep6 1075.49343780775 1075.4923499358601 34.195 2 0.21775302556321322 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 64208 20175 LQIEDFEARIA True PC9_epitope_Rep2 1303.67721582615 1303.67610993586 83.017 2 0.2177529895578712 0.00036105427849320016 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 115829 20678 TVMKDILQAV True PC9_epitope_Rep1 1116.6212811731598 1116.62018993586 84.362 2 0.21774329745391538 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 106193 13820 SVPIDLQKV True PC9_epitope_Rep4 997.58079626017 997.57968993586 61.055 2 0.2177360058941978 0.00036105427849320016 0.9438714419765777 ['ENSG00000198056|ENST00000338193|PRIM1'] 67186 12971 LTDHTVTFLQY True H1975_Epitope_Rep2 1336.66631678928 1336.66520993586 55.008 2 0.21771625980466053 0.00036105427849320016 0.9438714419765777 ['ENSG00000182173|ENST00000333213|TSEN54', 'nc|ENSG00000182173|Q7Z6J9-2|TSEN54'] 55634 8138 LDADPSLQR True PC9_epitope_Rep1 1013.51417325233 1013.51306993586 36.133 2 0.21770426168840526 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 54087 15407 KYMDINFDF True NCI_RA007_Epitope_Rep4 1191.52704643515 1191.5259499358601 66.934 2 0.21770068505632187 0.00036105427849320016 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 104907 11626 STFQQMWISK True NCI_RA007_Epitope_Rep3 1254.60669373818 1254.60558993586 52.851 2 0.21770012248634443 0.00036105427849320016 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 67356 7163 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 32.486 2 0.21768167920904483 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 125809 6717 VNLPINGNGKQ True NCI_RA007_Epitope_Rep5 1152.62512068364 1152.62402993586 32.509 2 0.21768162842953184 0.00036105427849320016 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 11613 14732 DHARLQLQL True PC9_epitope_Rep5 1092.60399131624 1092.60288993586 61.665 2 0.21768138365499315 0.00036105427849320016 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 23927 15808 EYNNNFHVL True PC9_epitope_Rep1 1148.5250722892001 1148.5239699358601 65.618 2 0.21766740053098632 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 31581 10155 GEFSITYKP True NCI_RA007_Epitope_Rep4 1040.5178616504397 1040.51676993586 45.919 2 0.2176664503423644 0.00036105427849320016 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 23583 20522 EYDNFFQHL True PC9_epitope_Rep2 1211.5247379360299 1211.52364993586 84.369 2 0.21765712967685927 0.00036105427849320016 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 73056 8622 NDLAVVDVR True H1975_Epitope_Rep3 999.53490869691 999.53380993586 38.158 2 0.217638930686165 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 132555 19255 VYPHPGTWESF True PC9_epitope_Rep1 1318.59823722946 1318.5971499358602 78.864 2 0.21763825273655849 0.00036105427849320016 0.9438714419765777 ['ENSG00000197165|ENST00000335715|SULT1A2'] 17694 18523 EHSLPTLGL True PC9_epitope_Rep3 965.51819600361 965.51708993586 76.466 2 0.2176241253566075 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 24755 17723 FAYDGKDYL True PC9_epitope_Rep5 1090.4971262058598 1090.49657496793 73.188 1 0.21762214814846356 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 18764 9030 ELDPSNTKALY True H1975_Epitope_Rep1 1249.61903224369 1249.61792993586 39.641 2 0.2176040057521566 0.00036105427849320016 0.9438714419765777 ['ENSG00000171497|ENST00000307720|PPID'] 58384 11140 LEVNEAELLR True H1975_Epitope_Rep3 1184.6401020414398 1184.63900993586 47.946 2 0.2175966326020432 0.00036105427849320016 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1'] 536 4663 AAQDSTDLVAK True NCI_RA007_Epitope_Rep4 1117.5615173675699 1117.5604299358602 24.359 2 0.21759163588522 0.00036105427849320016 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 7870 6871 ATANQIILK True NCI_RA007_Epitope_Rep4 970.58113061334 970.58002993586 33.047 2 0.21758890365428168 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 138407 13303 YRDPTTVTTL True PC9_epitope_Rep3 1165.59790287629 1165.5968099358602 56.203 2 0.2175748133330793 0.00036105427849320016 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 107326 22263 SYRELFEFF True PC9_epitope_Rep2 1236.5815245361598 1236.5804299358601 91.114 2 0.21756979804488133 0.00036105427849320016 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 89255 6826 RELAQQVQQVA True NCI_RA007_Epitope_Rep5 1268.68369818892 1268.68260993586 32.941 2 0.21756928478750098 0.00036105427849320016 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 109936 9028 THSDIQVKL True PC9_epitope_Rep1 1039.56620882519 1039.5651099358602 39.576 2 0.21756905978282542 0.00036105427849320016 0.9438714419765777 ['ENSG00000105223|ENST00000409735|PLD3', 'EGLN2-PLD3|1|fusion'] 48612 8389 KEIEYVETVTS True H1975_Epitope_Rep1 1296.6449126383598 1296.6438099358602 37.196 2 0.2175687497309072 0.00036105427849320016 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 53211 13182 KTDDLTMVLY True H1975_Epitope_Rep3 1197.59512599497 1197.5940299358601 55.956 2 0.21756577447261727 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 70504 12145 LYTEKFEEF True NCI_RA007_Epitope_Rep2 1204.5652057656796 1204.5641099358602 51.836 2 0.21756108101322344 0.00036105427849320016 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 118503 9278 VDSLVPIGR True H1975_Epitope_Rep1 954.5498304850599 954.54872993586 40.6 2 0.2175593013038521 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 61531 11299 LLGELLQDNAK True H1975_Epitope_Rep1 1212.67140216972 1212.6703099358601 48.439 2 0.21755793583467437 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 131254 10033 VVQDGITLITK True NCI_RA007_Epitope_Rep5 1185.69688864157 1185.6957899358601 45.231 2 0.21754489277994352 0.00036105427849320016 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 67149 10587 LTDEGYEHFY True H1975_Epitope_Rep3 1272.52988288612 1272.52878993586 45.792 2 0.21753733427316466 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 69701 19463 LVYPEELKPVL True PC9_epitope_Rep4 1298.74858986126 1298.7474899358601 82.981 2 0.2175344406740447 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 25641 11510 FEWENKVTV True NCI_RA007_Epitope_Rep3 1150.56587447202 1150.56476993586 52.39 2 0.2175153239125996 0.00036105427849320016 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 138067 5213 YQDTHPERL True PC9_epitope_Rep5 1157.5465360097699 1157.54542993586 25.069 2 0.21751461919394058 0.00036105427849320016 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 133554 12321 WHSDDEPSL True PC9_epitope_Rep1 1084.44615326216 1084.4450499358602 52.248 2 0.21751153657777364 0.00036105427849320016 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 53779 19208 KYFGGVLEY True PC9_epitope_Rep5 1074.53859709502 1074.53750993586 78.923 2 0.21750225274916515 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 140120 20561 YVQDFLNHL True PC9_epitope_Rep1 1147.56620882519 1147.5651099358602 83.9 2 0.2174957674877042 0.00036105427849320016 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 120092 19146 VFHPSQDLVF True PC9_epitope_Rep2 1187.5975089534697 1187.59640993586 79.016 2 0.2174899449988163 0.00036105427849320016 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 106951 13821 SYLDRTEQL True PC9_epitope_Rep3 1123.55095268387 1123.54984993586 58.242 2 0.21748659644302337 0.00036105427849320016 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 61371 14740 LLEKEILFY True H1975_Epitope_Rep2 1166.6587122276999 1166.6576099358601 61.858 2 0.21748359304625994 0.00036105427849320016 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5'] 23489 23184 EWASRFWLW True PC9_epitope_Rep1 1279.61382772395 1279.6127299358602 93.972 2 0.21747939348004805 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 8746 15324 AVDSLVPIGR True PC9_epitope_Rep3 1025.58694426977 1025.58584993586 64.099 2 0.21746851633656275 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 74879 10613 NLQTDLSDGLR True H1975_Epitope_Rep1 1230.62042922602 1230.6193299358602 45.777 2 0.21746780600902255 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 53922 6121 KYINTDAKF True NCI_RA007_Epitope_Rep5 1098.5709598524597 1098.5698699358602 30.225 2 0.21745597002249806 0.00036105427849320016 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 132271 18786 VYLDHAGATLF True PC9_epitope_Rep4 1205.6080736371698 1205.6069699358602 80.345 2 0.2174519610787938 0.00036105427849320016 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 38976 6565 HIYYITGETK True NCI_RA007_Epitope_Rep1 1223.6186383208699 1223.61754993586 29.551 2 0.21744843390380064 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 37955 6181 HEFDEQVAA True H1975_Epitope_Rep2 1044.4512386426 1044.45014993586 28.745 2 0.21744381058305007 0.00036105427849320016 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF', 'HERC2|p.R4650W|2|0.28|ENSG00000128731|chr15:28113644-28113644|G/A|missense_variant'] 54036 12719 KYLSVQGQLF True NCI_RA007_Epitope_Rep1 1181.64445914589 1181.6433699358602 53.459 2 0.21740323328235575 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 44791 18957 IPTPIVGV True PC9_epitope_Rep4 794.49019035062 794.4896449679301 81.006 1 0.21738660253166642 0.00036105427849320016 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 41054 20075 HYINMPVQF True PC9_epitope_Rep5 1147.5484505860697 1147.5473499358602 82.271 2 0.2173850926009587 0.00036105427849320016 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF', 'ENST00000513183.1_1_18:13124610-13124766:+|nuORF', 'ENST00000510237.5_1_18:13103579-13124766:+|nuORF'] 24348 12523 FADQEVRSL True PC9_epitope_Rep1 1063.52982331647 1063.5287299358602 53.04 2 0.21738397938870022 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 106968 18246 SYLEKQVVTF True PC9_epitope_Rep3 1212.6390394122798 1212.6379499358602 75.394 2 0.2173767155663423 0.00036105427849320016 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 102568 17306 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51289496793 71.827 1 0.2173714301185393 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 91298 19478 RLYPEGLAQL True PC9_epitope_Rep5 1158.6397081186199 1158.6386099358601 79.975 2 0.21736281378452024 0.00036105427849320016 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 113774 9380 TRDPQVNAF True PC9_epitope_Rep5 1046.5145076054998 1046.5134099358602 41.035 2 0.21736205390114058 0.00036105427849320016 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 67192 11723 LTDIFQHDTY True H1975_Epitope_Rep1 1251.57716743171 1251.57606993586 50.084 2 0.21735733201149723 0.00036105427849320016 0.9438714419765777 ['ENSG00000164366|ENST00000296824|CCDC127'] 1653 5752 AEGDVAALNR True NCI_RA007_Epitope_Rep1 1014.5094222250599 1014.50832993586 26.43 2 0.2173360378287295 0.00036105427849320016 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 95035 9570 RYQTQPVTL True PC9_epitope_Rep4 1104.5927579261997 1104.5916699358602 44.431 2 0.21733539219297232 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 22147 8658 ESYSVYVYK True NCI_RA007_Epitope_Rep3 1136.5389910178399 1136.5378899358602 41.136 2 0.21732750741240958 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 35271 5179 GSNGYILNK True NCI_RA007_Epitope_Rep3 964.4977949122 964.49668993586 27.363 2 0.21731649284426446 0.00036105427849320016 0.9438714419765777 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1', 'nc|ENSG00000181090|Q9H9B1-4|EHMT1', 'ENST00000371394.6_1_9:140611085-140686569:+|nuORF'] 47580 11284 IYNGDMEKI True PC9_epitope_Rep2 1081.51139637101 1081.51028993586 48.729 2 0.21731172607145668 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 71344 14822 MHSDMIYNV True PC9_epitope_Rep5 1108.4681516600401 1108.4670499358601 62.012 2 0.21730763906955344 0.00036105427849320016 0.9438714419765777 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 108504 6396 TEFPAKAVA True H1975_Epitope_Rep2 932.4967322830398 932.49562993586 29.526 2 0.21729339304035866 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137203|P05549-5|TFAP2A', 'nc|ENSG00000137203|P05549-6|TFAP2A', 'nc|ENSG00000137203|P05549|TFAP2A', 'ENSG00000137203|ENST00000379613|TFAP2A'] 77253 19617 NYINDLRNF True PC9_epitope_Rep5 1167.56727145435 1167.5661699358602 80.51 2 0.21728977247394038 0.00036105427849320016 0.9438714419765777 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 86843 13187 QRQDIAFAY True PC9_epitope_Rep4 1110.5458077337798 1110.54470993586 58.621 2 0.21728655228055205 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 42790 21923 IFIDPGYQTF True PC9_epitope_Rep5 1199.58627556343 1199.5851699358602 89.369 2 0.21728516959140737 0.00036105427849320016 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 132086 8829 VYIKHPVSL True PC9_epitope_Rep4 1054.61751612206 1054.61640993586 41.493 2 0.2172781296948316 0.00036105427849320016 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 41580 7140 IDEPLEGSEDR True NCI_RA007_Epitope_Rep1 1258.56772494682 1258.5666299358602 31.763 2 0.21727275581575758 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 125804 7258 VNLPINGNGKQ True NCI_RA007_Epitope_Rep1 1152.62512068364 1152.62402993586 32.222 2 0.2172641584475792 0.00036105427849320016 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 105572 7814 SVDYGQTHYY True H1975_Epitope_Rep2 1231.51456717515 1231.51346993586 35.004 2 0.2172638423071772 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000020577|Q9UPU9-2|SAMD4A', 'nc|ENSG00000020577|Q9UPU9-3|SAMD4A', 'ENSG00000020577|ENST00000554335|SAMD4A', 'ENST00000557013.1_1_14:55168817-55201659:+|nuORF', 'ENST00000555112.1_1_14:55034634-55169324:+|nuORF'] 17687 18440 EHSLPTLGL True PC9_epitope_Rep1 965.51819600361 965.51708993586 75.72 2 0.21725747752189614 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 42958 5628 IGAEVYHNLK True NCI_RA007_Epitope_Rep5 1142.60840799034 1142.6067749037902 28.336 3 0.21725546155334569 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 27674 16810 FQDENHLYL True PC9_epitope_Rep3 1177.54038800017 1177.53928993586 69.81 2 0.21724327664672385 0.00036105427849320016 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 31684 6201 GEIESKFNQA True H1975_Epitope_Rep3 1121.53530261973 1121.5342099358602 28.865 2 0.21722677396507822 0.00036105427849320016 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 132747 22599 VYSLQQFGF True PC9_epitope_Rep1 1087.53384606775 1087.53274993586 91.736 2 0.2172231848176732 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 125601 11101 VMAPRTVLL True NCI_RA007_Epitope_Rep4 998.5946725024999 998.59356993586 49.576 2 0.21721690180451092 0.00036105427849320016 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 112366 11824 TNAENEFVTIK True PC9_epitope_Rep4 1264.6299312805597 1264.62882993586 53.249 2 0.21721371648130672 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 112359 8553 TNAENEFVTIK True NCI_RA007_Epitope_Rep3 1264.6299312805597 1264.62882993586 40.715 2 0.21719605039006964 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 35253 9205 GSLFLQTPK True NCI_RA007_Epitope_Rep3 989.5545815123298 989.55348993586 43.302 2 0.21719083798044006 0.00036105427849320016 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 68776 9303 LVDPASHTLY True H1975_Epitope_Rep1 1114.56587447202 1114.56476993586 40.693 2 0.2171877173384679 0.00036105427849320016 0.9438714419765777 ['SEMA4F|p.P563Lfs*9|1|0.13|ENSG00000135622|chr2:74679319-74679319|C/-|frameshift_variant', 'nc|ENSG00000135622|O95754-2|SEMA4F', 'ENSG00000135622|ENST00000357877|SEMA4F'] 89283 4150 RELEVQHPAA True H1975_Epitope_Rep2 1148.59382055536 1148.59216490379 21.061 3 0.2171803134040999 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 106872 21118 SYIEHIFEI True PC9_epitope_Rep2 1149.57062549929 1149.5695299358601 86.689 2 0.21716530902964554 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 29445 21863 FVHDLVLYL True PC9_epitope_Rep1 1117.6171817688898 1117.6160899358601 88.908 2 0.2171652410781228 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 61271 8311 LLDSSQKNLY True H1975_Epitope_Rep2 1179.61355294043 1179.61244993586 36.92 2 0.21716321434364438 0.00036105427849320016 0.9438714419765777 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 116757 11727 TYLEKAIKI True PC9_epitope_Rep6 1077.6433965167298 1077.6422899358602 56.256 2 0.21715779924685172 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 138866 5867 YSDMREANY True H1975_Epitope_Rep3 1147.46042342731 1147.45932993586 27.578 2 0.2171564760798045 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 139367 5116 YTDVSTRY True H1975_Epitope_Rep1 1003.46107505031 1003.45996993586 24.748 2 0.21714588781513278 0.00036105427849320016 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 83083 18919 PYMDSPQSIGF True PC9_epitope_Rep6 1240.5434247752798 1240.5423299358602 85.416 2 0.21714254654575085 0.00036105427849320016 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 79089 21149 PFVDHVFTF True PC9_epitope_Rep5 1107.53893144819 1107.5378299358601 86.406 2 0.21711892233158117 0.00036105427849320016 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 139184 7836 YSTDVSVDEVK True NCI_RA007_Epitope_Rep2 1240.5823123818002 1240.5812099358602 35.11 2 0.21711793016832004 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148672|P00367-3|GLUD1', 'GLUD2|p.P408Qfs*23|1|0.53|ENSG00000182890|chrX:121048903-121048903|G/-|frameshift_variant', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1', 'GLUD1|p.G331Vfs*49|1|0.33|ENSG00000148672|chr10:87060982-87060982|C/-|frameshift_variant'] 117458 11407 VADTVARVL True PC9_epitope_Rep4 942.5498304850598 942.54872993586 51.647 2 0.2171159533467088 0.00036105427849320016 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 131821 21956 VYAPPVGGFSF True PC9_epitope_Rep3 1139.56514619603 1139.56404993586 89.753 2 0.21711334986698447 0.00036105427849320016 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 31902 12884 GEQLTLPPPP True H1975_Epitope_Rep2 1047.5600608155898 1047.5589699358602 54.671 2 0.21711272463312511 0.00036105427849320016 0.9438714419765777 ['ENSG00000196313|ENST00000434423|POM121', 'nc|ENSG00000205578|A6NF01|POM121B', 'nc|ENSG00000196313|Q96HA1-2|POM121', 'ENSG00000272391|ENST00000615331|POM121C', 'nc|ENSG00000196313|Q96HA1-3|POM121', 'nc|ENSG00000272391|A8CG34|POM121C'] 93869 8034 RVFVVGVGMTK True NCI_RA007_Epitope_Rep3 1191.67979910879 1191.67870993586 38.692 2 0.2171066569782596 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 47577 11976 IYNGDMEKI True PC9_epitope_Rep1 1081.51139637101 1081.51028993586 50.928 2 0.2171011233167923 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 9228 9266 AVQEFGLARFK True NCI_RA007_Epitope_Rep3 1264.6928063206399 1264.69117490379 43.556 3 0.21709335779222783 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 139880 9026 YVDQAELEKY True H1975_Epitope_Rep3 1256.5924831426798 1256.5913899358602 39.713 2 0.2170879743845394 0.00036105427849320016 0.9438714419765777 ['ENSG00000112972|ENST00000325110|HMGCS1', 'ENST00000507004.1_1_5:43298575-43313480:-|nuORF', 'ENST00000507293.1_1_5:43298575-43313499:-|nuORF'] 109986 12451 THSNTIVVSL True PC9_epitope_Rep6 1069.57677350889 1069.57566993586 59.319 2 0.21708594122623773 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 107064 13438 SYLSRLQYF True NCI_RA007_Epitope_Rep3 1175.5975089534702 1175.59640993586 60.135 2 0.21708500973067993 0.00036105427849320016 0.9438714419765777 ['ENSG00000145703|ENST00000274364|IQGAP2', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 14222 7565 DSYDSYATHNE True PC9_epitope_Rep2 1300.48438924568 1300.48328993586 34.469 2 0.21708118371106994 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'ENST00000591055.5_1_19:1271297-1272439:+|nuORF', 'ENST00000593128.5_1_19:1271297-1272439:+|nuORF'] 27821 21041 FQIIQSIRMGM True PC9_epitope_Rep1 1322.6838985130598 1322.6828099358602 85.764 2 0.21707943170392968 0.00036105427849320016 0.9438714419765777 ['ENSG00000120742|ENST00000239944|SERP1', 'ENSG00000151778|ENST00000379179|SERP2'] 40916 17821 HVVDFFNRV True PC9_epitope_Rep3 1131.58252759567 1131.5814299358601 73.746 2 0.21707900366874996 0.00036105427849320016 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A'] 29639 22033 FVLPVATQI True PC9_epitope_Rep1 986.58006798418 986.57896993586 89.565 2 0.21706674396287268 0.00036105427849320016 0.9438714419765777 ['ENSG00000111678|ENST00000229281|C12orf57'] 97075 13479 SEYLRYEDTLL True H1975_Epitope_Rep2 1400.6823607762399 1400.6812699358602 56.979 2 0.21706612188623628 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 67363 7803 LTDRGVMSY True H1975_Epitope_Rep3 1040.49608066004 1040.49498993586 34.997 2 0.21706489776161544 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 53702 20581 KYDEIFYNL True PC9_epitope_Rep3 1203.5811901829898 1203.58008993586 84.431 2 0.21705160557617567 0.00036105427849320016 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 21225 19219 ERFNVPVSL True PC9_epitope_Rep5 1059.5712942056298 1059.57018993586 78.966 2 0.21704761071121384 0.00036105427849320016 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 67125 11147 LTDDGNKWLY True H1975_Epitope_Rep3 1223.58225281215 1223.5811499358601 47.972 2 0.2170458753727699 0.00036105427849320016 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 4959 20905 ALIEKLVEL True PC9_epitope_Rep3 1026.63249747986 1026.6314099358601 85.686 2 0.21703292716500408 0.00036105427849320016 0.9438714419765777 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 32044 7985 GEVLKTYNV True H1975_Epitope_Rep3 1021.54441075145 1021.54330993586 35.684 2 0.2170194925390436 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 13013 14817 DLQNVNITLR True PC9_epitope_Rep6 1184.65133543148 1184.6502299358601 68.965 2 0.2170177343352934 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1', 'ENST00000420550.1_1_1:224044699-224045026:-|nuORF'] 32221 20596 GFGFVTFDDHD True PC9_epitope_Rep2 1255.51456717515 1255.51346993586 84.654 2 0.21701164439256804 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 94894 5472 RYPDNLKHL True PC9_epitope_Rep4 1154.61964138038 1154.61799490379 27.797 3 0.2169965864428042 0.00036105427849320016 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 43968 7123 ILGATIENSR True H1975_Epitope_Rep3 1072.58767254576 1072.58656993586 32.369 2 0.21699156124416263 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 22832 11322 EVEELILTESK True NCI_RA007_Epitope_Rep2 1288.67621276664 1288.67510993586 48.629 2 0.21698773183827763 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 136205 18380 YGLPVVVKL True PC9_epitope_Rep6 986.6164534929 986.61534993586 83.343 2 0.2169874633167654 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 40671 2789 HTLNQIDSVK True NCI_RA007_Epitope_Rep1 1153.6091362663299 1153.60802993586 14.729 2 0.21698632442607765 0.00036105427849320016 0.9438714419765777 ['CON__P12763'] 1903 8018 AEILNGKEISA True H1975_Epitope_Rep2 1143.61355294043 1143.61244993586 35.789 2 0.2169818972515006 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 14382 17123 DTEPPPLLVY True H1975_Epitope_Rep2 1142.5859412102598 1142.5848499358601 71.138 2 0.21697458313755674 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 48355 7329 KEAEPIPETV True H1975_Epitope_Rep1 1111.57610480255 1111.5750099358602 33.2 2 0.21696977403612833 0.00036105427849320016 0.9438714419765777 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6'] 7420 5477 ASATVAIPK True NCI_RA007_Epitope_Rep5 856.50181766348 856.50072993586 27.754 2 0.21696327939566096 0.00036105427849320016 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 8702 6029 AVDFAERHGY True H1975_Epitope_Rep2 1163.53597132607 1163.53432490379 28.17 3 0.2169619670513137 0.00036105427849320016 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000528296.5_1_8:146015816-146017457:-|nuORF', 'ENST00000525232.5_1_8:146017155-146017514:-|nuORF', 'RPL8|p.G91Afs*58|1|0.17|ENSG00000161016|chr8:144791781-144791781|C/-|frameshift_variant', 'ENST00000531767.1_1_8:146017155-146017514:-|nuORF'] 115693 17598 TVLEEIGNRV True PC9_epitope_Rep3 1128.6138872935999 1128.61278993586 72.878 2 0.21694801741101477 0.00036105427849320016 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 139281 5164 YTDHQNSSSYY True H1975_Epitope_Rep3 1363.5316737912701 1363.53056993586 24.964 2 0.21694584259817323 0.00036105427849320016 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 70047 18385 LYGRNFNYL True PC9_epitope_Rep3 1158.5821932425 1158.58108993586 75.925 2 0.2169435906221613 0.00036105427849320016 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 53409 21682 KVFELDLVTL True PC9_epitope_Rep2 1175.6801759482698 1175.67906993586 88.876 2 0.21693620099905456 0.00036105427849320016 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 132455 16355 VYNSEYYHF True PC9_epitope_Rep3 1220.5138388991602 1220.51274993586 68.044 2 0.21693582165737987 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 67382 5297 LTDTPKATSY True H1975_Epitope_Rep2 1095.54480467427 1095.54370993586 25.43 2 0.21693414863924368 0.00036105427849320016 0.9438714419765777 ['ENST00000466854.5_1_3:122081873-122084420:-|nuORF', 'ENST00000460810.1_1_3:122081873-122084409:-|nuORF'] 9061 15408 AVIVLVENFYK True NCI_RA007_Epitope_Rep1 1293.7332741502898 1293.7321699358602 64.013 2 0.21691830049714714 0.00036105427849320016 0.9438714419765777 ['ENST00000474991.1_1_1:153580188-153585458:-|nuORF', 'ENSG00000188643|ENST00000368706|S100A16'] 131930 18211 VYEYVVERF True PC9_epitope_Rep2 1202.5971746002995 1202.5960699358602 75.363 2 0.21691525575903184 0.00036105427849320016 0.9438714419765777 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 49396 19713 KILDLETQL True PC9_epitope_Rep1 1071.61757569171 1071.61646993586 80.652 2 0.21691063336258973 0.00036105427849320016 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 47228 17022 IYDPNLAFLRF True NCI_RA007_Epitope_Rep3 1367.7237720957498 1367.72266993586 74.817 2 0.2169090810225369 0.00036105427849320016 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 46243 8955 ITDSAGHILY True H1975_Epitope_Rep3 1088.55022440788 1088.54912993586 39.441 2 0.2169040240061616 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 9739 9148 AYLDKSPQF True NCI_RA007_Epitope_Rep4 1067.52876068731 1067.52766993586 42.028 2 0.21689477296290546 0.00036105427849320016 0.9438714419765777 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000513447.1_1_5:54569247-54572159:-|nuORF', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 107427 6963 SYTSVKENF True NCI_RA007_Epitope_Rep3 1073.5029398622898 1073.50184993586 34.496 2 0.2168858299573488 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 63752 13505 LPRPQGITV True PC9_epitope_Rep5 979.5814649665099 979.58036993586 56.967 2 0.21688582531393205 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 132638 9994 VYQHLFTRI True NCI_RA007_Epitope_Rep2 1175.6451278522297 1175.64349490379 43.496 3 0.21688416655192863 0.00036105427849320016 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 47625 20228 IYPEVVHMF True PC9_epitope_Rep2 1133.5579526406098 1133.55684993586 83.225 2 0.2168798350656006 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 87177 19809 QSLEYLEQV True PC9_epitope_Rep2 1107.54480467427 1107.54370993586 81.584 2 0.21687874258947262 0.00036105427849320016 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 116584 20234 TYGEIFEKF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 82.659 2 0.21687692601337935 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 89499 4425 REQPPTGGNLA True H1975_Epitope_Rep3 1138.57308511078 1138.57198993586 22.143 2 0.21687433838023162 0.00036105427849320016 0.9438714419765777 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 2509 9374 AEQQERFFM[Oxidation]P True H1975_Epitope_Rep2 1297.5761222663298 1297.5750299358601 41.02 2 0.21686965627795649 0.00036105427849320016 0.9438714419765777 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF'] 132797 17741 VYSQIPAAVKL True PC9_epitope_Rep5 1187.6914093383098 1187.6903099358601 73.258 2 0.21686942491164082 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 132977 19767 VYVDLGGSHVF True PC9_epitope_Rep3 1191.5924235730301 1191.5913299358601 81.262 2 0.21685910829086155 0.00036105427849320016 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 14087 6027 DSDRGLQEGY True H1975_Epitope_Rep2 1138.4890807032998 1138.48798993586 28.161 2 0.21685295505776447 0.00036105427849320016 0.9438714419765777 ['ENSG00000175931|ENST00000319380|UBE2O'] 34942 9178 GQWKKGFVL True NCI_RA007_Epitope_Rep4 1061.6022004110898 1061.6011099358602 42.144 2 0.2168507226427369 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 27807 10809 FQESSVKEL True PC9_epitope_Rep3 1065.5342399905699 1065.5331499358601 46.545 2 0.21684861207277 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 9992 10958 AYSSYVHQY True PC9_epitope_Rep3 1116.48762415132 1116.48652993586 47.132 2 0.21683620550100163 0.00036105427849320016 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 85744 20241 QLVDIIEKV True PC9_epitope_Rep5 1055.62266107215 1055.6215699358602 82.906 2 0.21682580659847744 0.00036105427849320016 0.9438714419765777 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 139293 9772 YTDKVVIGM True H1975_Epitope_Rep2 1024.52631815916 1024.5252299358601 42.574 2 0.21682083842574057 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 108582 14591 TEIDPINALQA True H1975_Epitope_Rep2 1183.60846755999 1183.60736993586 61.28 2 0.2168190115628466 0.00036105427849320016 0.9438714419765777 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY', 'ENST00000331585.6_1_2:196447906-196448179:-|nuORF'] 70374 15726 LYQDHMQYI True PC9_epitope_Rep5 1209.54884450889 1209.54774993586 65.486 2 0.21681200151109056 0.00036105427849320016 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 132195 19218 VYKAFVMETF True PC9_epitope_Rep4 1233.6103821362897 1233.60928993586 82.023 2 0.21680162145823598 0.00036105427849320016 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 92348 9341 RQPDSGISSI True PC9_epitope_Rep5 1058.5356369729 1058.53452993586 40.883 2 0.2167986684023647 0.00036105427849320016 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 94668 8441 RYLEKPMEI True NCI_RA007_Epitope_Rep4 1177.6165301458898 1177.6154299358602 39.284 2 0.21678822058381808 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 91284 20771 RLYDGLFKVI True PC9_epitope_Rep1 1222.70739375562 1222.70628993586 84.723 2 0.21678625043944608 0.00036105427849320016 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 138957 11628 YSELGHPFGY True H1975_Epitope_Rep2 1168.5189242795998 1168.5178299358602 49.796 2 0.21677535952620897 0.00036105427849320016 0.9438714419765777 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6', 'ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 113266 13616 TQFELTGHSV True PC9_epitope_Rep1 1117.54038800017 1117.53928993586 57.229 2 0.21676849484193725 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 68469 17957 LTVEERNLLSV True PC9_epitope_Rep4 1271.7085159544301 1271.7074099358601 77.126 2 0.2167654641546557 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 102059 7753 SPPPPPPPP True PC9_epitope_Rep4 881.4647038787699 881.46360993586 37.214 2 0.21676483389486637 0.00036105427849320016 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 46682 15511 ITVTSEVPFSK True PC9_epitope_Rep5 1206.6496040959798 1206.6485099358601 64.672 2 0.21676220103154004 0.00036105427849320016 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22'] 86972 16818 QRVPLSVQL True PC9_epitope_Rep3 1038.61857875122 1038.61748993586 69.842 2 0.21676088966194906 0.00036105427849320016 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 94726 15261 RYLETILEI True NCI_RA007_Epitope_Rep5 1148.6441247927198 1148.64302993586 65.393 2 0.21675962273675872 0.00036105427849320016 0.9438714419765777 ['ENST00000512908.2_1_5:70398727-70422449:-|nuORF', 'ENST00000315147.8_1_5:70265933-70281744:-|nuORF', 'ENST00000511830.2_1_5:69390488-69422514:-|nuORF', 'nc|ENSG00000249437|Q13075-2|NAIP', 'ENSG00000249437|ENST00000517649|NAIP'] 107009 17138 SYLKQLPHF True PC9_epitope_Rep3 1131.6076797143498 1131.60604490379 71.079 3 0.21675442732523129 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 87718 9825 QVEEELTHLQK True PC9_epitope_Rep1 1352.6935941662798 1352.69194490379 42.653 3 0.21674821677712464 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167460|P67936-2|TPM4'] 47941 18212 IYYVDVQKF True PC9_epitope_Rep4 1173.6070110080097 1173.6059099358602 78.121 2 0.21674129769971218 0.00036105427849320016 0.9438714419765777 ['ENSG00000160410|ENST00000291842|SHKBP1'] 6990 19183 AQQELKLLL True PC9_epitope_Rep2 1054.6386454894598 1054.63754993586 79.161 2 0.21673654678364115 0.00036105427849320016 0.9438714419765777 ['ENSG00000119041|ENST00000263956|GTF3C3'] 10079 5962 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep5 1119.5171508382302 1119.51604993586 29.616 2 0.21672717457320112 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 67512 16104 LTELPDWSY True H1975_Epitope_Rep3 1122.5233409537 1122.5222499358601 67.402 2 0.21672266635798637 0.00036105427849320016 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 76285 15521 NSDPNLHLL True PC9_epitope_Rep1 1021.5192586327701 1021.51816993586 64.524 2 0.21668852419211532 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 77512 17541 NYQGHFHLF True PC9_epitope_Rep3 1161.5355774032498 1161.5344899358602 72.656 2 0.216686693088591 0.00036105427849320016 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 54132 17917 KYNANFVTF True PC9_epitope_Rep1 1102.54474510462 1102.54364993586 73.71 2 0.2166777011982232 0.00036105427849320016 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 8028 10098 ATDRWYDEY True H1975_Epitope_Rep2 1217.49891711101 1217.4978299358602 43.836 2 0.2166758684881017 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 88535 3679 RAFDSAVAK True NCI_RA007_Epitope_Rep4 963.5137793295098 963.51268993586 20.261 2 0.21666681192880297 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.E441K|1|0.13|ENSG00000132305|chr2:86151377-86151377|C/T|missense_variant'] 105571 7640 SVDYGQTHYY True H1975_Epitope_Rep1 1231.51456717515 1231.51346993586 34.373 2 0.21666489297316255 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000020577|Q9UPU9-2|SAMD4A', 'nc|ENSG00000020577|Q9UPU9-3|SAMD4A', 'ENSG00000020577|ENST00000554335|SAMD4A', 'ENST00000557013.1_1_14:55168817-55201659:+|nuORF', 'ENST00000555112.1_1_14:55034634-55169324:+|nuORF'] 84051 8993 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57746993586 39.497 2 0.21665753944033758 0.00036105427849320016 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 60438 21528 LILDPIFKV True PC9_epitope_Rep2 1056.65831830488 1056.6572299358602 88.275 2 0.21665701077906724 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 42051 10171 IEEDIRDLAA True H1975_Epitope_Rep3 1143.57716743171 1143.57606993586 44.167 2 0.21665548583739896 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 47437 12045 IYIKQIKTF True PC9_epitope_Rep4 1152.6906810623198 1152.68958993586 54.137 2 0.2166338706008471 0.00036105427849320016 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 39987 4497 HQRITEEL True NCI_RA007_Epitope_Rep3 1024.53015766964 1024.5290699358602 24.526 2 0.2166318313788887 0.00036105427849320016 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 1397 14702 AEEFPNLAV True H1975_Epitope_Rep2 988.4865615221598 988.48546993586 61.713 2 0.2166317432789896 0.00036105427849320016 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 5773 20713 APELLFFAK True PC9_epitope_Rep5 1034.5800679841798 1034.5789699358602 84.731 2 0.21662940584089285 0.00036105427849320016 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 88385 17091 QYNTYPIKL True PC9_epitope_Rep1 1138.60225998074 1138.60116993586 70.567 2 0.21662693687565923 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1'] 131888 20394 VYDVVELKF True PC9_epitope_Rep2 1110.5961119711399 1110.5950099358602 83.87 2 0.2166213449651195 0.00036105427849320016 0.9438714419765777 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 94422 14358 RYFENPQVI True PC9_epitope_Rep4 1164.5927579262 1164.5916699358602 63.135 2 0.216620511714481 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 77472 21061 NYPETLGRLLI True PC9_epitope_Rep5 1287.7186867153098 1287.7175899358601 86.071 2 0.21661987431583324 0.00036105427849320016 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 23936 15725 EYNNNFHVL True PC9_epitope_Rep5 1148.5250722892001 1148.5239699358601 65.481 2 0.21661825697303297 0.00036105427849320016 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 69662 17814 LVVTNLDKL True PC9_epitope_Rep3 1013.6120963884499 1013.61098993586 73.718 2 0.21661715971700968 0.00036105427849320016 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 105401 20199 SVADYFKQI True PC9_epitope_Rep3 1069.54441075145 1069.5433099358602 82.955 2 0.21661344088214046 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 54174 14975 KYPDIISRI True PC9_epitope_Rep2 1103.63389446219 1103.63278993586 62.858 2 0.21661221127028613 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 136665 8465 YIDQGRNPQLY True H1975_Epitope_Rep2 1365.66771377161 1365.6666099358602 37.514 2 0.21661203413298333 0.00036105427849320016 0.9438714419765777 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000503112.1_1_5:6372618-6374583:-|nuORF'] 113564 17634 TQYPFDFRGA True PC9_epitope_Rep4 1200.5563724174797 1200.55526993586 75.852 2 0.21661196736160673 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 114164 7389 TRSTFSTNY True PC9_epitope_Rep2 1075.49343780775 1075.4923499358601 33.801 2 0.21660802947566063 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 106582 8579 SVYDSVLQK True NCI_RA007_Epitope_Rep5 1037.5393253710097 1037.53822993586 39.679 2 0.2166025959193982 0.00036105427849320016 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 75379 18423 NQDKNFAFL True PC9_epitope_Rep3 1095.53490869691 1095.53380993586 76.069 2 0.21658902397109453 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 40703 7566 HTQGPVDGSLY True H1975_Epitope_Rep2 1172.5462016565998 1172.5451099358602 34.057 2 0.21658846218643923 0.00036105427849320016 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 139686 10518 YTTDRVMTV True PC9_epitope_Rep2 1084.5222954078802 1084.52118993586 45.779 2 0.21658770571447203 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 91303 20999 RLYPWGVVEV True PC9_epitope_Rep5 1216.6604435631998 1216.65934993586 85.836 2 0.21658246833858247 0.00036105427849320016 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 117169 15585 TYTDRVFFL True NCI_RA007_Epitope_Rep1 1160.5866099165999 1160.58550993586 64.71 2 0.2165821950598485 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 67199 9068 LTDITKGVQY True H1975_Epitope_Rep1 1136.607739284 1136.60664993586 39.787 2 0.21657849460310644 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 87087 12583 QSELVGQLY True H1975_Epitope_Rep1 1035.52367530687 1035.52256993586 53.449 2 0.21657672715811874 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 48655 8147 KELDYGSMTEA True H1975_Epitope_Rep3 1242.5438186980998 1242.54272993586 36.314 2 0.21656684649290875 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 67307 12869 LTDPLESSTDY True H1975_Epitope_Rep2 1239.5506779003501 1239.54958993586 54.613 2 0.21656378150294966 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000079156|Q9BZF3-6|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6'] 130284 11501 VTTDIQVKV True PC9_epitope_Rep4 1001.5757108797299 1001.5746099358599 52.001 2 0.21656335381806444 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 114856 12046 TTDLELIKY True H1975_Epitope_Rep2 1094.58594121026 1094.5848499358601 51.414 2 0.21655963498386607 0.00036105427849320016 0.9438714419765777 ['ENSG00000164109|ENST00000296509|MAD2L1', 'nc|ENSG00000164109|Q13257-2|MAD2L1', 'ENST00000511295.1_1_4:120986776-120987958:-|nuORF'] 40597 4529 HTDILKEKY True H1975_Epitope_Rep3 1145.60807363717 1145.60641490379 22.542 3 0.21655477073491208 0.00036105427849320016 0.9438714419765777 ['DTWD1|p.R271S|1|0.23|ENSG00000104047|chr15:49643476-49643476|A/C|missense_variant', 'nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 133556 11460 WHSDDEPSL True PC9_epitope_Rep2 1084.44615326216 1084.4450499358602 49.4 2 0.21655419959703084 0.00036105427849320016 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 131749 17787 VYAALQRQLL True PC9_epitope_Rep5 1173.6869926642098 1173.6858899358601 73.435 2 0.21654877178538753 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 23827 18692 EYLLKVNEI True PC9_epitope_Rep2 1119.61757569171 1119.61646993586 77.265 2 0.21652283623568883 0.00036105427849320016 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 47636 18324 IYPHGLVLL True PC9_epitope_Rep6 1023.61170246563 1023.61060993586 83.126 2 0.21652222763585827 0.00036105427849320016 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 96937 6429 SEVATLTAAGK True NCI_RA007_Epitope_Rep1 1046.5607890915799 1046.5596899358602 29.032 2 0.21651549684844942 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 102453 10609 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep1 1225.56488887629 1225.56378993586 45.762 2 0.21649873281324425 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 113236 8251 TQDTQPHYI True PC9_epitope_Rep3 1101.50908787189 1101.50798993586 36.713 2 0.2164951703353293 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 67130 6870 LTDDKLSQY True H1975_Epitope_Rep2 1081.52915461013 1081.52804993586 31.344 2 0.21649257743081013 0.00036105427849320016 0.9438714419765777 ['ENSG00000121879|ENST00000263967|PIK3CA'] 132815 14619 VYTDFAFRI True NCI_RA007_Epitope_Rep3 1130.5760452328998 1130.57494993586 64.85 2 0.21649099971355806 0.00036105427849320016 0.9438714419765777 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000462798.1_1_1:6592521-6593409:-|nuORF'] 132480 10164 VYPDGIRHI True PC9_epitope_Rep3 1068.5716285587998 1068.5705299358601 44.049 2 0.21648980366133855 0.00036105427849320016 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 87749 20273 QVFPGLLERV True PC9_epitope_Rep2 1156.6604435631998 1156.65934993586 83.403 2 0.21648737286156064 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 139332 12582 YTDSSSILNY True H1975_Epitope_Rep1 1161.51898384925 1161.51788993586 53.445 2 0.21648002508489073 0.00036105427849320016 0.9438714419765777 ['ENSG00000111647|ENST00000279907|BLTP3B'] 74067 12914 NHTIYINNL True PC9_epitope_Rep4 1100.5614577979202 1100.56036993586 57.559 2 0.21647031799910582 0.00036105427849320016 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 47538 22438 IYLPYLQNW True PC9_epitope_Rep4 1208.6229954253201 1208.62188993586 94.54 2 0.21646524287987523 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 48433 6781 KEEDYIRYA True H1975_Epitope_Rep2 1185.56660274801 1185.56550993586 30.998 2 0.21646271080555748 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 89634 11488 RETNLDSLPL True NCI_RA007_Epitope_Rep4 1156.6088019131598 1156.6077099358602 51.121 2 0.2164519177032383 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 26225 13929 FHWSGNEQM True PC9_epitope_Rep5 1134.45527847722 1134.45418993586 58.598 2 0.21644860500456142 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B'] 120091 19711 VFHPSQDLVF True PC9_epitope_Rep1 1187.5975089534697 1187.59640993586 80.644 2 0.21644766665291224 0.00036105427849320016 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 12315 7980 DITSDTSGDFR True H1975_Epitope_Rep1 1212.5258601348398 1212.5247699358601 35.645 2 0.2164476291738363 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 87809 8916 QVIGVVLQK True NCI_RA007_Epitope_Rep4 982.6175161220598 982.61640993586 41.127 2 0.2164403694060717 0.00036105427849320016 0.9438714419765777 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 14378 8762 DTENQTLNY True H1975_Epitope_Rep2 1096.46728262956 1096.46618993586 38.666 2 0.21643278872763566 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217'] 116579 13603 TYGEIFEKF True NCI_RA007_Epitope_Rep5 1132.54407639828 1132.5429699358601 59.011 2 0.21642280351969073 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 94508 12134 RYIANTVEL True PC9_epitope_Rep6 1077.58185888933 1077.5807699358602 58.023 2 0.2164222807285461 0.00036105427849320016 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 92154 6842 RQAVPLFSK True NCI_RA007_Epitope_Rep4 1044.60801406752 1044.6069099358601 32.938 2 0.2164182688223047 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 61860 22741 LLLEILHEI True PC9_epitope_Rep5 1091.6590465808702 1091.6579499358602 92.478 2 0.21641285272896288 0.00036105427849320016 0.9438714419765777 ['ENSG00000197930|ENST00000395686|ERO1A', 'ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 28363 11959 FSDIHDFEY True H1975_Epitope_Rep2 1171.48220441771 1171.48110993586 51.079 2 0.21639905324099615 0.00036105427849320016 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.E275*|1|0.26|ENSG00000196455|chr3:130735917-130735918|-/A|frameshift_variant'] 109965 18562 THSLPVVVI True PC9_epitope_Rep3 963.5753169569099 963.57420993586 76.619 2 0.21639635567881582 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 69170 7804 LVLVGDGGTGK True NCI_RA007_Epitope_Rep1 1014.57095985246 1014.56986993586 34.346 2 0.2163938961327526 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 45373 15663 ISDLSINSLY True H1975_Epitope_Rep2 1123.57610480255 1123.5750099358602 65.405 2 0.2163870323247398 0.00036105427849320016 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 72361 9303 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 40.742 2 0.2163691382394591 0.00036105427849320016 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 129668 16256 VTIEDVQKL True PC9_epitope_Rep5 1043.58627556343 1043.5851699358602 67.52 2 0.21636808535695176 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 95372 6785 SAIDTREEL True NCI_RA007_Epitope_Rep3 1032.50875351872 1032.5076499358602 33.793 2 0.21636153960091928 0.00036105427849320016 0.9438714419765777 ['ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-3|CEP170'] 23811 15145 EYLERAPEL True PC9_epitope_Rep5 1118.5607890915799 1118.5596899358602 63.263 2 0.21635996692311962 0.00036105427849320016 0.9438714419765777 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 49475 11474 KIYEGQVEV True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 49.015 2 0.2163589088391051 0.00036105427849320016 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 123384 5550 VIDDTNITR True H1975_Epitope_Rep3 1045.5403880001702 1045.53928993586 26.393 2 0.21634329735170268 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 92347 9186 RQPDSGISSI True PC9_epitope_Rep5 1058.5356369729 1058.53452993586 40.278 2 0.21633819736473348 0.00036105427849320016 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 44405 9121 INEVENQILTR True H1975_Epitope_Rep3 1327.7095785835897 1327.7084899358601 40.072 2 0.21632978207470838 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 61228 20373 LLDPSVFHV True PC9_epitope_Rep2 1025.5545815123298 1025.5534899358602 83.787 2 0.21630975668945043 0.00036105427849320016 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 140676 15034 YYPSTPGRYSI True PC9_epitope_Rep5 1302.6244519773 1302.62334993586 62.832 2 0.21630705980352927 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 54293 11257 KYPSDLPYM True NCI_RA007_Epitope_Rep4 1112.5212327787199 1112.52012993586 50.193 2 0.2162969134076631 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG', 'ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG'] 53310 15261 KTMEDTLMTV True PC9_epitope_Rep6 1167.55154693083 1167.5504499358601 70.811 2 0.21629164583416718 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 44961 20623 IQHDLIFSL True PC9_epitope_Rep2 1084.5916952970401 1084.5905899358602 84.76 2 0.21629162232583632 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 86678 16913 QRIDEFEAL True PC9_epitope_Rep2 1119.5560380643099 1119.5549499358601 70.3 2 0.21629073290552395 0.00036105427849320016 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 9339 7533 AVTDAIMSR True NCI_RA007_Epitope_Rep4 962.48551597634 962.48440993586 35.621 2 0.21628953070376442 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64897669-64899838:-|nuORF'] 131847 17791 VYAVIPAEKF True PC9_epitope_Rep2 1135.62774645259 1135.62664993586 73.724 2 0.2162844270989646 0.00036105427849320016 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 112130 21761 TLVDEVFRI True PC9_epitope_Rep1 1090.60225998074 1090.60116993586 88.537 2 0.2162822145523895 0.00036105427849320016 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2', 'RPA2|p.G67W|1|0.2|ENSG00000117748|chr1:27907201-27907201|C/A|missense_variant'] 114844 11929 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.4974899358601 51.04 2 0.21627324639790943 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 129253 10065 VTDPSTLEQY True H1975_Epitope_Rep1 1151.53463391339 1151.53352993586 43.655 2 0.21626872357553908 0.00036105427849320016 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 106060 5217 SVLTDPAKLKK True NCI_RA007_Epitope_Rep4 1198.7285231230196 1198.72687490379 26.601 3 0.21625267743578708 0.00036105427849320016 0.9438714419765777 ['ENSG00000115548|ENST00000312912|KDM3A'] 136319 13892 YGYPDPSYL True H1975_Epitope_Rep2 1073.47057710485 1073.47007496793 58.58 1 0.2162459587655557 0.00036105427849320016 0.9438714419765777 ['ENSG00000163840|ENST00000296161|DTX3L', 'nc|ENSG00000163840|Q8TDB6-2|DTX3L'] 116590 18999 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 81.171 2 0.21623747694462847 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 133522 16588 WHHTFYNEL True PC9_epitope_Rep1 1245.55670677065 1245.55560993586 68.631 2 0.21623684523255152 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 129250 6795 VTDPEKLNNY True H1975_Epitope_Rep3 1191.57716743171 1191.57606993586 31.09 2 0.21623479214631955 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000104885|ENST00000398665|DOT1L'] 106496 19747 SVVKVLTEL True PC9_epitope_Rep5 986.6011973515799 986.60010993586 81.002 2 0.21622983308855986 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 11641 10098 DHASIQMNV True PC9_epitope_Rep6 1013.46002950449 1013.4589299358599 49.447 2 0.2162203982981831 0.00036105427849320016 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 38245 14310 HEYPWILSA True H1975_Epitope_Rep2 1114.54474510462 1114.54364993586 60.192 2 0.21622021425999535 0.00036105427849320016 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 7910 7486 ATAVM[Oxidation]PDGQFK True PC9_epitope_Rep1 1179.5594095730296 1179.55830993586 33.613 2 0.2162129161705873 0.00036105427849320016 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 31084 11904 GAYGKVFLV True H1975_Epitope_Rep2 952.5382031721999 952.53710993586 50.868 2 0.21620878616103167 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 137104 10381 YLDDPDLKY True H1975_Epitope_Rep3 1140.5339056374 1140.53280993586 44.987 2 0.21620381418783824 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 3929 6815 AHDQNSNLL True PC9_epitope_Rep3 1010.47812209678 1010.47702993586 31.231 2 0.21620016930180228 0.00036105427849320016 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF'] 128191 12572 VRTPYTMSY True PC9_epitope_Rep2 1116.52738078832 1116.5262899358602 53.666 2 0.21619276231179524 0.00036105427849320016 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 91148 21084 RLPEIYIQL True PC9_epitope_Rep5 1143.66519459047 1143.6640899358601 86.162 2 0.2161866541426909 0.00036105427849320016 0.9438714419765777 ['EHD4|p.I335M|1|0.07|ENSG00000103966|chr15:41909783-41909783|G/C|missense_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 138495 20119 YRIESYWTY True PC9_epitope_Rep3 1279.5873381925899 1279.58624993586 82.64 2 0.21617022324018992 0.00036105427849320016 0.9438714419765777 ['ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 139851 15407 YVDPQFLTY True H1975_Epitope_Rep1 1144.54407639828 1144.54357496793 64.534 1 0.21615609554081577 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 49375 21993 KIIDIFTTL True PC9_epitope_Rep3 1062.6324974798601 1062.6314099358601 89.895 2 0.2161292798636254 0.00036105427849320016 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant', 'DNAH5|p.A481T|1|0.13|ENSG00000039139|chr5:13913838-13913838|C/T|missense_variant'] 37570 11948 GYSEHFVEF True NCI_RA007_Epitope_Rep4 1113.47672511445 1113.47562993586 52.958 2 0.21612434720619889 0.00036105427849320016 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 76584 5848 NTEEEGLKY True H1975_Epitope_Rep2 1081.4927691014097 1081.49217496793 27.482 1 0.21612046702599827 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 106145 17108 SVPDPELIKTV True PC9_epitope_Rep2 1196.66525416012 1196.66414993586 71.056 2 0.2161094938029805 0.00036105427849320016 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 140478 22309 YYIEGIENSVF True PC9_epitope_Rep5 1332.62378327096 1332.62268993586 90.818 2 0.21610946865945388 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 39340 12596 HLSVNDLPVGR True PC9_epitope_Rep5 1205.65166978465 1205.6500349037901 53.451 3 0.21610519939549094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 93845 19621 RVFIGNLNTL True PC9_epitope_Rep5 1145.65569253593 1145.65458993586 80.525 2 0.21610117971035392 0.00036105427849320016 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 87748 20179 QVFPGLLERV True PC9_epitope_Rep2 1156.6604435631998 1156.65934993586 83.033 2 0.2160967798456104 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 17704 15999 EHSLPTLGL True PC9_epitope_Rep6 965.51819600361 965.51708993586 73.853 2 0.21609461808921657 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 135562 7900 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 35.333 2 0.2160901994410111 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 140621 20699 YYNPHLLLNTL True PC9_epitope_Rep3 1359.7186867153098 1359.7175899358601 84.892 2 0.21607779394870294 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 47855 7290 IYTGKENYEY True H1975_Epitope_Rep2 1278.57683307854 1278.5757299358602 32.979 2 0.21607738730083859 0.00036105427849320016 0.9438714419765777 ['ENSG00000163638|ENST00000498707|ADAMTS9', 'nc|ENSG00000163638|Q9P2N4-4|ADAMTS9'] 118524 10653 VDTFLEDVK True H1975_Epitope_Rep3 1064.5389910178399 1064.5378899358602 46.05 2 0.21607192159867195 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 70818 12289 MEENPGIFA True H1975_Epitope_Rep2 1006.4429824580199 1006.44247496793 52.354 1 0.21606102073090536 0.00036105427849320016 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1'] 140838 19963 YYTDIMHTL True PC9_epitope_Rep3 1155.5270464351497 1155.5259499358601 82.033 2 0.21605607555514658 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 49008 19410 KFIDPIYQVW True PC9_epitope_Rep6 1307.69140933831 1307.6903099358601 87.317 2 0.2160356701281924 0.00036105427849320016 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 22278 4395 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 22.026 2 0.21601448046769423 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 41059 15579 HYKPTPLYF True PC9_epitope_Rep1 1164.59678067748 1164.59568993586 64.747 2 0.21600938873312184 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 10042 8165 AYVEKVERL True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 36.763 2 0.21600055292519776 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 9543 10500 AYAIIKEEL True NCI_RA007_Epitope_Rep3 1048.580461907 1048.57936993586 48.363 2 0.21599954041867356 0.00036105427849320016 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 91586 14268 RPAQPTLWTA True PC9_epitope_Rep5 1139.60874234351 1139.60764993586 59.885 2 0.21598507584385265 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 28433 8151 FSEEQLNRY True H1975_Epitope_Rep1 1184.5462016565998 1184.5451099358602 36.293 2 0.2159833003327296 0.00036105427849320016 0.9438714419765777 ['ENSG00000064995|ENST00000361288|TAF11', 'nc|ENSG00000064995|Q15544-2|TAF11'] 138409 11887 YRDPTTVTTL True PC9_epitope_Rep4 1165.59790287629 1165.5968099358602 53.499 2 0.215980091978715 0.00036105427849320016 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 116966 16200 TYPKIWVKV True PC9_epitope_Rep5 1132.66446631448 1132.66282490379 67.304 3 0.21596992130850332 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 72109 14949 MRDPTFVRL True PC9_epitope_Rep1 1133.60154878809 1133.59990490379 62.323 3 0.2159602658765399 0.00036105427849320016 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 106873 21214 SYIEHIFEI True PC9_epitope_Rep2 1149.57062549929 1149.5695299358601 87.058 2 0.2159587015275995 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 6841 18731 AQIEDLQVKL True PC9_epitope_Rep1 1155.6499384491499 1155.6488499358602 76.837 2 0.21593822219338493 0.00036105427849320016 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 117908 14208 VAQLEQVYIR True PC9_epitope_Rep2 1217.6768219033297 1217.67572993586 59.918 2 0.21593751338038347 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 108238 8471 TEAGM[Oxidation]FAIRA True H1975_Epitope_Rep2 1081.5226301414898 1081.5215299358601 37.535 2 0.21593676715946755 0.00036105427849320016 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000470499.1_1_3:131895323-131895440:+|nuORF', 'ENSG00000161057|ENST00000292644|PSMC2', 'nc|ENSG00000161057|P35998-2|PSMC2'] 1896 13545 AEILELAGNAA True H1975_Epitope_Rep2 1070.5607890915799 1070.5596899358602 57.238 2 0.21593083648897765 0.00036105427849320016 0.9438714419765777 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 10070 13667 AYVHMVTHF True PC9_epitope_Rep5 1103.52223583823 1103.52112993586 57.595 2 0.21592526951811947 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 74596 13499 NLDPLTETY True H1975_Epitope_Rep3 1064.50260550912 1064.5015099358602 57.2 2 0.21592499775925242 0.00036105427849320016 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 113905 14995 TRIGLETSL True PC9_epitope_Rep1 988.55530978832 988.55420993586 62.498 2 0.21589370463725044 0.00036105427849320016 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 117178 20025 TYTDRVFFL True PC9_epitope_Rep4 1160.5866099165999 1160.58550993586 85.162 2 0.21589205733508168 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 21102 7468 ERDPQSPEF True PC9_epitope_Rep4 1103.4883524273098 1103.48724993586 36.08 2 0.21589007336090896 0.00036105427849320016 0.9438714419765777 ['ENSG00000170903|ENST00000301919|MSANTD4'] 97692 11327 SHDSTSQLYTV True PC9_epitope_Rep5 1236.5622456435601 1236.5611499358602 48.563 2 0.21588926964456068 0.00036105427849320016 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 7111 5272 AQYEDIAQKS True NCI_RA007_Epitope_Rep5 1151.5458673034298 1151.5447699358601 26.975 2 0.21586417216814316 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 66525 7786 LSSETEVALAR True NCI_RA007_Epitope_Rep1 1174.6193665968597 1174.61826993586 34.276 2 0.21586355353349296 0.00036105427849320016 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 118304 11793 VDDGLISLQVK True H1975_Epitope_Rep1 1185.6605031328502 1185.6594099358601 50.354 2 0.21585658530220553 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 25314 14194 FEELNADLFR True NCI_RA007_Epitope_Rep1 1252.6088019131598 1252.6077099358602 59.247 2 0.2158560413820855 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 140734 15454 YYQHIVTTL True PC9_epitope_Rep5 1136.5866099166 1136.58550993586 64.454 2 0.2158528300611116 0.00036105427849320016 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 13923 18333 DRFEFPEQL True PC9_epitope_Rep6 1179.5560380643099 1179.5549499358601 83.16 2 0.21584453966818926 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 17527 10578 EHINEGETAML True PC9_epitope_Rep6 1242.55505208814 1242.5539499358601 51.498 2 0.21584355875672906 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 39960 13456 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5439899358599 56.616 2 0.21584167001489563 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 31220 10715 GDLGIEIPAEK True H1975_Epitope_Rep3 1140.60265390356 1140.60154993586 46.291 2 0.21583985965229932 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 24209 13672 EYVEKFYRI True PC9_epitope_Rep4 1245.6393737654498 1245.63772490379 60.48 3 0.2158393436640334 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 75504 20274 NQITQLESL True PC9_epitope_Rep1 1044.54513902744 1044.5440499358601 82.811 2 0.21583920109875787 0.00036105427849320016 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 9650 14990 AYGKDFHLI True PC9_epitope_Rep5 1062.5498304850598 1062.5487299358601 62.662 2 0.21583175767329638 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 45804 12924 ISPDQLADLYK True H1975_Epitope_Rep1 1261.6554177524097 1261.65432993586 54.786 2 0.21582861795960773 0.00036105427849320016 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 70051 18148 LYGRNFNYL True PC9_epitope_Rep5 1158.5821932425 1158.58108993586 74.815 2 0.21582219815920342 0.00036105427849320016 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 73981 19622 NHQDVAGVFAL True PC9_epitope_Rep3 1169.58292151849 1169.58182993586 80.713 2 0.21580856071563972 0.00036105427849320016 0.9438714419765777 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 71982 17293 MQAERIFSEV True PC9_epitope_Rep2 1208.5859582936 1208.58486993586 71.776 2 0.2158024876279666 0.00036105427849320016 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 94640 22087 RYLDLFTNF True PC9_epitope_Rep5 1187.59750895347 1187.59640993586 89.987 2 0.21579235781036868 0.00036105427849320016 0.9438714419765777 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'KDELR3|p.F122Lfs*15|1|0.31|ENSG00000100196|chr22:38481225-38481228|TCTC/-|frameshift_variant'] 129247 6636 VTDPEKLNNY True H1975_Epitope_Rep1 1191.57716743171 1191.57606993586 30.58 2 0.21579130030584842 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000104885|ENST00000398665|DOT1L'] 2339 4553 AEQDPDELNKA True H1975_Epitope_Rep3 1228.55716026312 1228.55606993586 22.633 2 0.2157851582917597 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 7105 5508 AQYEDIAQK True NCI_RA007_Epitope_Rep1 1064.5138388991597 1064.51274993586 25.495 2 0.21577207286423247 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 70554 18254 LYVVDLKKF True PC9_epitope_Rep1 1123.6641319613097 1123.66249490379 75.003 3 0.21576264506262008 0.00036105427849320016 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 10879 4944 DAPQDFHPDR True NCI_RA007_Epitope_Rep1 1196.52104953792 1196.51941490379 23.314 3 0.21574914404832818 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'FLNA|p.R664L|1|0.13|ENSG00000196924|chrX:154364557-154364557|C/A|missense_variant'] 14365 12910 DTEFPNFKY True H1975_Epitope_Rep2 1159.51858992643 1159.51748993586 54.771 2 0.21574627954582046 0.00036105427849320016 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1', 'RPA1|p.C503R|1|0.38|ENSG00000132383|chr17:1888807-1888807|T/C|missense_variant'] 45018 10575 IQLVEEELDR True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 45.63 2 0.21573286317527496 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 75637 15695 NQSEKIFSL True PC9_epitope_Rep2 1064.55022440788 1064.54912993586 65.647 2 0.2157296584225365 0.00036105427849320016 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426'] 49370 18669 KIIDEDGLLNL True PC9_epitope_Rep6 1241.68671788069 1241.68562993586 84.455 2 0.2157295781741797 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 6712 16517 AQDEHLITF True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 68.773 2 0.21572915080622804 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 53204 11596 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep2 1213.59004099497 1213.58894993586 49.671 2 0.21572407884351574 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 89463 5515 REQEITAVQA True H1975_Epitope_Rep3 1143.58840082175 1143.58730993586 26.262 2 0.21571950604112083 0.00036105427849320016 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 3799 12455 AGVLAHLEEER True PC9_epitope_Rep5 1222.6305999868998 1222.6289549037901 52.908 3 0.215717353510833 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 94604 15316 RYKLYQEMF True PC9_epitope_Rep4 1276.6274291827597 1276.6263299358602 66.845 2 0.21571543045790728 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 44242 14211 ILTDITKGV True PC9_epitope_Rep4 958.5698972233 958.56880993586 62.571 2 0.21571055668625821 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 94968 13632 RYPTSIASLAF True NCI_RA007_Epitope_Rep3 1224.65027280232 1224.64916993586 60.923 2 0.21570499705041096 0.00036105427849320016 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 54349 9113 KYQEVTNNL True PC9_epitope_Rep5 1107.5560380643099 1107.5549499358601 39.998 2 0.2156983842019648 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 84129 6447 QEQMNEFRA True H1975_Epitope_Rep2 1151.5029569456299 1151.50184993586 29.719 2 0.21569586022773043 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 24724 11389 FAYDGKDYL True H1975_Epitope_Rep3 1090.4971262058598 1090.4960299358602 48.921 2 0.2156948625589535 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 132866 9581 VYTSGVYHI True NCI_RA007_Epitope_Rep1 1037.51819600361 1037.5170899358602 41.267 2 0.21569195735619412 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 99517 9060 SLESYAFNM[Oxidation]K True H1975_Epitope_Rep1 1204.5434251557197 1204.5423299358602 39.758 2 0.21569123721419892 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 49311 10214 KHTEMITTL True PC9_epitope_Rep5 1072.5586809166 1072.55758993586 44.276 2 0.21568790092978926 0.00036105427849320016 0.9438714419765777 ['ENSG00000164985|ENST00000380733|PSIP1'] 117179 21030 TYTDRVFFL True PC9_epitope_Rep5 1160.5866099165999 1160.58550993586 85.949 2 0.21567985766827114 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 118999 5104 VEFM[Oxidation]DDTSR True H1975_Epitope_Rep3 1114.46008945458 1114.45898993586 24.744 2 0.2156710510597257 0.00036105427849320016 0.9438714419765777 ['ENST00000442562.1_1_17:18476116-18476272:+|nuORF', 'ENSG00000233927|ENST00000600659|RPS28'] 69011 6853 LVHELDEAEYR True H1975_Epitope_Rep1 1372.6622940379998 1372.6606349037902 31.404 3 0.21566902210416286 0.00036105427849320016 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1'] 104998 10654 STIFYYVQK True NCI_RA007_Epitope_Rep3 1147.5913609438696 1147.59026993586 48.956 2 0.21566275212957114 0.00036105427849320016 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 14658 11874 DVNAAIATIK True PC9_epitope_Rep6 1014.57095985246 1014.56986993586 56.892 2 0.21565222100731282 0.00036105427849320016 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 75347 15647 NQAKYIPEL True PC9_epitope_Rep3 1074.57095985246 1074.5698699358602 65.332 2 0.2156446526180659 0.00036105427849320016 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 132134 7002 VYISEHEHF True NCI_RA007_Epitope_Rep4 1159.5298233164701 1159.5287299358602 33.558 2 0.2156361665722621 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 95102 9374 RYTLQASTF True NCI_RA007_Epitope_Rep5 1085.5505587610498 1085.54946993586 42.698 2 0.21562536449818007 0.00036105427849320016 0.9438714419765777 ['ENSG00000055130|ENST00000325222|CUL1'] 33212 14272 GLADASLLKKV True PC9_epitope_Rep2 1113.6757592741699 1113.67466993586 60.164 2 0.21561279744911774 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10'] 83087 18789 PYNDYFEYF True NCI_RA007_Epitope_Rep5 1256.50260550912 1256.5015099358602 79.109 2 0.21560626182574733 0.00036105427849320016 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 35249 6047 GSLDQVLKK True NCI_RA007_Epitope_Rep4 986.5760452328999 986.57494993586 29.877 2 0.21559585083117985 0.00036105427849320016 0.9438714419765777 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1'] 135396 7210 YDNEFGYSNR True H1975_Epitope_Rep3 1263.5156298043098 1263.51452993586 32.707 2 0.21559031807302328 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'chr12:6537216-6538101|251|78.77|0.54|7.19|+|1|GAPDH,GAPDH|1'] 24377 7570 FAEHNDLQY True H1975_Epitope_Rep2 1135.4934378077498 1135.4923499358601 34.07 2 0.2155900644923559 0.00036105427849320016 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 103726 7327 SREPSQMEM True PC9_epitope_Rep5 1093.4532298718898 1093.45212993586 33.143 2 0.21558905971378675 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 40364 6699 HRTELETKL True PC9_epitope_Rep3 1125.61422164677 1125.61258490379 30.791 3 0.21557506967853798 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 24372 7484 FAEHNDLQY True H1975_Epitope_Rep1 1135.4934378077498 1135.4923499358601 33.784 2 0.21557427533014323 0.00036105427849320016 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 28814 7819 FTDGITRTY True H1975_Epitope_Rep2 1072.5189242796 1072.5178299358602 35.023 2 0.21556648426325273 0.00036105427849320016 0.9438714419765777 ['ENST00000294309.7_2_11:68821527-68822650:+|nuORF'] 85339 18448 QLDDLKVEL True PC9_epitope_Rep4 1071.58119018299 1071.58008993586 79.031 2 0.21555654785918835 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 49003 16316 KFIDPIYQVW True NCI_RA007_Epitope_Rep5 1307.69140933831 1307.6903099358601 69.515 2 0.21555465824894307 0.00036105427849320016 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 855 9155 ADIEM[Oxidation]PFDPSK True H1975_Epitope_Rep1 1264.5645545231198 1264.56344993586 40.121 2 0.21554770227052245 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 75950 13143 NRFPAVNSL True PC9_epitope_Rep4 1016.5403284305199 1016.53922993586 58.449 2 0.21554711662596837 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108587|O95249-2|GOSR1', 'ENSG00000108587|ENST00000451249|GOSR1', 'nc|ENSG00000108587|O95249|GOSR1'] 6773 12334 AQEYEALLNIK True H1975_Epitope_Rep1 1290.6819668534197 1290.68086993586 52.472 2 0.21554233854135216 0.00036105427849320016 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 6718 17150 AQDEHLITF True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 70.989 2 0.21554221883973698 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 30058 20647 FYLEGGFSKF True PC9_epitope_Rep3 1193.57571087973 1193.57460993586 84.69 2 0.21553681954423232 0.00036105427849320016 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 7826 7808 ATAELIMSR True NCI_RA007_Epitope_Rep4 990.51681610462 990.51570993586 36.717 2 0.21552948437251673 0.00036105427849320016 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000595467.1_1_19:36037522-36037810:+|nuORF'] 22990 17467 EVIRELAGI True PC9_epitope_Rep2 998.5760452328998 998.57494993586 72.439 2 0.2155257179169815 0.00036105427849320016 0.9438714419765777 ['ENSG00000066654|ENST00000396083|THUMPD1'] 70148 15264 LYLDEAHSI True PC9_epitope_Rep2 1059.52367530687 1059.52256993586 63.99 2 0.21551343394951653 0.00036105427849320016 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'SPTLC2|p.A351S|1|0.2|ENSG00000100596|chr14:77555425-77555425|C/A|missense_variant'] 9021 8381 AVIGADSVTLK True NCI_RA007_Epitope_Rep3 1072.61282466444 1072.61172993586 40.065 2 0.21551321285123998 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 69209 11290 LVNELTEFAK True H1975_Epitope_Rep1 1162.6233893481399 1162.6222899358602 48.404 2 0.2155125342451311 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 132875 13559 VYTSGVYHI True PC9_epitope_Rep1 1037.51819600361 1037.5170899358602 57.009 2 0.21550931896303194 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 9020 9234 AVIGADSVTLK True NCI_RA007_Epitope_Rep2 1072.61282466444 1072.61172993586 40.529 2 0.21550839077475703 0.00036105427849320016 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 8694 7161 AVDDGVNTFK True NCI_RA007_Epitope_Rep1 1064.5138388991602 1064.51274993586 31.844 2 0.2155041352185971 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000413611.2_1_1:146675128-146675437:-|nuORF'] 97076 13342 SEYLRYEDTLL True H1975_Epitope_Rep3 1400.6823607762399 1400.6812699358602 56.582 2 0.21549217775838403 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 109978 14547 THSNTIVVSL True PC9_epitope_Rep1 1069.57677350889 1069.57566993586 60.78 2 0.21548678181797976 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 28091 19431 FRDYFPIQL True PC9_epitope_Rep6 1197.6182443980497 1197.6171499358602 87.402 2 0.21548604315823924 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 71392 8364 M[Oxidation]IEPRTLQY True H1975_Epitope_Rep2 1165.58014501761 1165.5790499358602 37.125 2 0.21547672068605306 0.00036105427849320016 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 47632 20242 IYPHGLVLL True PC9_epitope_Rep2 1023.61170246563 1023.61060993586 83.281 2 0.21547222448947248 0.00036105427849320016 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 67460 11310 LTEEETQFY True H1975_Epitope_Rep2 1158.5080848123798 1158.50698993586 48.551 2 0.2154641879509401 0.00036105427849320016 0.9438714419765777 ['ENSG00000211455|ENST00000389032|STK38L', 'nc|ENSG00000211455|Q9Y2H1-2|STK38L', 'ENSG00000112079|ENST00000229812|STK38'] 7104 5825 AQYEDIANR True PC9_epitope_Rep6 1078.5043368446197 1078.5032299358602 30.621 2 0.215452019684225 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 45216 14628 IRKPYIWEY True PC9_epitope_Rep4 1266.67609362734 1266.6744449037901 64.196 3 0.21544718068158492 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 11780 7877 DHIKDSFHSL True PC9_epitope_Rep4 1197.57783613805 1197.57619490379 37.726 3 0.21540727495240233 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 82134 10751 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.4705499358602 46.383 2 0.21539976816632986 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 47579 11194 IYNGDMEKI True PC9_epitope_Rep2 1081.51139637101 1081.51028993586 48.383 2 0.21539888427181264 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 31219 10749 GDLGIEIPAEK True H1975_Epitope_Rep1 1140.60265390356 1140.60154993586 46.308 2 0.21539232958028381 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 135850 5522 YEQNDRLTP True H1975_Epitope_Rep2 1134.53055159246 1134.5294499358602 26.248 2 0.21538218347344631 0.00036105427849320016 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 20687 20174 EQIKDIFYI True PC9_epitope_Rep4 1167.6175756917098 1167.61646993586 85.736 2 0.21537107375855238 0.00036105427849320016 0.9438714419765777 ['ENSG00000164902|ENST00000297540|PHAX'] 20904 9526 EQSVQEIPVSR True PC9_epitope_Rep3 1270.6517293542997 1270.65062993586 41.589 2 0.21536806759569938 0.00036105427849320016 0.9438714419765777 ['CON__P06868'] 135536 9126 YEEFDEKIA True H1975_Epitope_Rep2 1142.5131701928199 1142.5120699358602 40.055 2 0.21536592364396642 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 26958 22833 FLITILDHL True PC9_epitope_Rep5 1083.63283183303 1083.6317299358602 92.823 2 0.2153594342453394 0.00036105427849320016 0.9438714419765777 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2', 'nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1'] 69851 13946 LYANMFERL True NCI_RA007_Epitope_Rep4 1155.57466533391 1155.5735699358602 60.919 2 0.21535683167435907 0.00036105427849320016 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 115476 19853 TVFTDHMLTV True PC9_epitope_Rep5 1162.5692456002998 1162.5681499358602 81.414 2 0.21535501206694246 0.00036105427849320016 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 24475 22739 FAIDPHLLLSV True PC9_epitope_Rep1 1223.69140933831 1223.6903099358601 92.27 2 0.21535235614594117 0.00036105427849320016 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 42823 17859 IFKPPDPDNTF True PC9_epitope_Rep5 1289.62920300457 1289.62810993586 73.713 2 0.21535235310158637 0.00036105427849320016 0.9438714419765777 ['ENSG00000165943|ENST00000298894|MOAP1'] 30010 19201 FYHKYFNYL True PC9_epitope_Rep1 1293.61824439805 1293.6171499358602 78.652 2 0.2153502324775063 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 24463 21371 FAIDEVLEKV True PC9_epitope_Rep3 1161.62814037541 1161.6270499358602 87.502 2 0.21534446843609048 0.00036105427849320016 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 106172 11718 SVPEFPLSPPK True NCI_RA007_Epitope_Rep5 1196.6441247927198 1196.64302993586 51.727 2 0.21534446192799403 0.00036105427849320016 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 23953 19880 EYNSDLHQFF True PC9_epitope_Rep1 1298.5567663402996 1298.5556699358601 81.287 2 0.2153398847288552 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 126685 16399 VPRPAVLDPAL True PC9_epitope_Rep4 1146.67609362734 1146.6749899358601 71.039 2 0.21533171511203453 0.00036105427849320016 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 61220 9548 LLDPSQKNLY True H1975_Epitope_Rep1 1189.63428838501 1189.6331899358602 41.651 2 0.21530723722204467 0.00036105427849320016 0.9438714419765777 ['ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000277462|ENST00000366503|ZNF670'] 110523 4040 TIQSGEQPYK True NCI_RA007_Epitope_Rep4 1149.56660274801 1149.56550993586 21.798 2 0.2153037368019661 0.00036105427849320016 0.9438714419765777 ['ENSG00000168653|ENST00000372969|NDUFS5'] 61321 7478 LLEDKHFQSY True H1975_Epitope_Rep1 1278.6244519773 1278.6228149037902 33.763 3 0.21529912462585282 0.00036105427849320016 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 135198 14628 YAVEGRDLTL True PC9_epitope_Rep6 1135.5873381925899 1135.58624993586 68.184 2 0.21529766915337467 0.00036105427849320016 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 48903 7280 KEVEQFTQVA True H1975_Epitope_Rep1 1177.5979028762902 1177.5968099358602 33.014 2 0.2152911009456241 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 85823 17259 QMISRIEYI True PC9_epitope_Rep2 1151.60088008175 1151.5997899358601 71.647 2 0.21528369044996037 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E'] 87448 11394 QTELTNQLEY True H1975_Epitope_Rep2 1237.5826467349698 1237.58154993586 48.876 2 0.21527893384359587 0.00036105427849320016 0.9438714419765777 ['TAOK1|p.G928Vfs*42|1|0.31|ENSG00000160551|chr17:29542799-29542801|GCC/TT|frameshift_variant', 'ENSG00000160551|ENST00000261716|TAOK1', 'ENST00000578653.1_1_17:27849339-27857712:+|nuORF'] 63749 12739 LPRPQGITV True PC9_epitope_Rep2 979.5814649665099 979.58036993586 54.305 2 0.21527410503994923 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 136103 14670 YGEPGEVFINK True PC9_epitope_Rep3 1251.6135529404298 1251.61244993586 61.564 2 0.21526819097453237 0.00036105427849320016 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 54179 14380 KYPDIISRI True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 63.221 2 0.21526353409518137 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 107320 11108 SYREDPIVY True PC9_epitope_Rep6 1140.5451390274397 1140.5440499358601 53.663 2 0.21526225258578802 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 24060 11664 EYQIKTNQL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 49.861 2 0.21526088685485448 0.00036105427849320016 0.9438714419765777 ['ENST00000602574.5_1_10:22607528-22607842:+|nuORF', 'ENST00000602395.1_1_10:22607528-22615407:+|nuORF', 'ENST00000496071.5_1_10:22607528-22608924:+|nuORF', 'ENST00000463409.6_1_10:22605382-22615407:+|nuORF', 'ENSG00000148444|ENST00000376836|COMMD3'] 81777 7245 PSEESQDYY True H1975_Epitope_Rep2 1116.42474911124 1116.42364993586 32.802 2 0.2152589066836389 0.00036105427849320016 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 71551 5724 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 27.086 2 0.21525605256648678 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 94898 15505 RYPDNLKHLYL True PC9_epitope_Rep5 1430.76703389006 1430.7653849037902 64.649 3 0.21524231795281157 0.00036105427849320016 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59'] 70077 20204 LYIGWDKHYGF True PC9_epitope_Rep1 1397.67682190333 1397.6751749037899 82.543 3 0.21524154115930189 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 47630 20581 IYPHGLVLL True PC9_epitope_Rep1 1023.61170246563 1023.61060993586 83.979 2 0.2152404001461264 0.00036105427849320016 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 113231 8097 TQDTQPHYI True PC9_epitope_Rep1 1101.50908787189 1101.50798993586 35.971 2 0.21523720886698328 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 127035 20664 VPYLVGQVV True PC9_epitope_Rep2 972.5644179200399 972.56332993586 84.921 2 0.215231156676029 0.00036105427849320016 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 140696 9143 YYQDTPKQI True PC9_epitope_Rep5 1154.5607890915799 1154.5596899358602 40.114 2 0.21521806190861054 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 40152 7813 HRDYETATL True PC9_epitope_Rep3 1104.51998690876 1104.5188899358602 35.043 2 0.2152122157355872 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 67304 11658 LTDPIQGTEY True H1975_Epitope_Rep3 1135.53971929383 1135.5386299358602 49.977 2 0.2152087687950949 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 52087 20760 KLLPQLTYL True PC9_epitope_Rep5 1087.66413196131 1087.66302993586 84.905 2 0.2152002488987555 0.00036105427849320016 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000486769.1_1_9:100760930-100767440:+|nuORF', 'nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B'] 49435 18786 KILSELFTV True PC9_epitope_Rep6 1048.61684741572 1048.61574993586 84.902 2 0.2151959785820111 0.00036105427849320016 0.9438714419765777 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF'] 45561 9804 ISGLIYEETR True NCI_RA007_Epitope_Rep2 1179.6135529404298 1179.61244993586 42.76 2 0.2151958814567264 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 57862 9907 LEQEIATYR True PC9_epitope_Rep1 1121.57168812845 1121.5705899358602 42.965 2 0.21519419038852142 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16722254-16722455:-|nuORF', 'CON__P35900', 'KRT20|p.R372S|2|0.36|ENSG00000171431|chr17:40878170-40878170|G/T|missense_variant', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__Q61782', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312'] 15784 8274 EDFSETLTR True H1975_Epitope_Rep1 1096.50366813828 1096.50256993586 36.759 2 0.21519408365164305 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 104997 10562 STIFYYVQK True NCI_RA007_Epitope_Rep3 1147.5913609438696 1147.59026993586 48.599 2 0.21519141048381138 0.00036105427849320016 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 105926 19168 SVLDVDGMKV True PC9_epitope_Rep1 1061.54269649929 1061.5415899358602 78.524 2 0.2151835784222209 0.00036105427849320016 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 58675 17058 LFIATSQKF True PC9_epitope_Rep3 1053.58588164061 1053.58478993586 70.766 2 0.21517595017909705 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 106875 21458 SYIEHIFEI True PC9_epitope_Rep3 1149.57062549929 1149.5695299358601 87.83 2 0.21517397393155904 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 48601 7729 KEIEGIFHA True H1975_Epitope_Rep3 1042.54474510462 1042.54364993586 34.712 2 0.2151716237984584 0.00036105427849320016 0.9438714419765777 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1'] 101808 12969 SPIENIQRVA True PC9_epitope_Rep5 1125.6142216467701 1125.6131299358601 54.895 2 0.21517135317055275 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 87676 10482 QVDEDALTY True H1975_Epitope_Rep2 1052.4662200004 1052.4651299358602 45.337 2 0.2151703942336312 0.00036105427849320016 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'GBE1-ZNF385D|1|fusion'] 44244 13354 ILTDITKGV True PC9_epitope_Rep6 958.5698972233 958.56880993586 63.028 2 0.21517023479601038 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 24189 21343 EYTRALFLL True PC9_epitope_Rep3 1124.62299542532 1124.62188993586 87.393 2 0.21515867925927346 0.00036105427849320016 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2'] 118973 5654 VEFATHEEA True H1975_Epitope_Rep3 1031.4559896698697 1031.4548899358601 26.778 2 0.21515680196797504 0.00036105427849320016 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 112704 4581 TPGPGAQSALR True H1975_Epitope_Rep3 1053.55670677065 1053.55560993586 22.743 2 0.215153288321519 0.00036105427849320016 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14'] 137328 21877 YLIPDIDLKL True PC9_epitope_Rep2 1201.69582601241 1201.69472993586 89.625 2 0.21515041683263403 0.00036105427849320016 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 20764 20204 EQLNGILLHL True PC9_epitope_Rep4 1148.65535818276 1148.6542699358602 85.852 2 0.21513707209083546 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 89338 7351 REM[Oxidation]EENFAV True H1975_Epitope_Rep1 1139.49172393603 1139.4906299358602 33.286 2 0.21512791916116145 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 49382 19108 KIIGAVDQIQL True PC9_epitope_Rep2 1196.71287305888 1196.71176993586 78.87 2 0.21511419797157436 0.00036105427849320016 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 72685 17978 MYINEVERL True PC9_epitope_Rep5 1165.58014463717 1165.5790499358602 74.17 2 0.21510875072990226 0.00036105427849320016 0.9438714419765777 ['ENSG00000152104|ENST00000366956|PTPN14', 'PTPN14|p.H1030Afs*47|1|0.17|ENSG00000152104|chr1:214369641-214369642|-/T|frameshift_variant', 'PTPN14|p.D213Y|1|0.54|ENSG00000152104|chr1:214401717-214401717|C/A|missense_variant'] 89383 11171 REMENIIATV True NCI_RA007_Epitope_Rep4 1174.60160835774 1174.6005099358601 49.843 2 0.2150944866772954 0.00036105427849320016 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3'] 11808 19102 DHLLSVSL True PC9_epitope_Rep2 882.4810822189 882.48053496793 78.847 1 0.21508816481880527 0.00036105427849320016 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 89335 7502 REMDYETEV True H1975_Epitope_Rep2 1170.48630382198 1170.4852099358602 33.807 2 0.21508805354584495 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 105667 11651 SVFVETFVQK True NCI_RA007_Epitope_Rep4 1182.6284747285797 1182.62736993586 51.772 2 0.21508224313322297 0.00036105427849320016 0.9438714419765777 ['ENSG00000170786|ENST00000303749|SDR16C5', 'nc|ENSG00000170786|Q8N3Y7-2|SDR16C5', 'SDR16C5|p.E232Kfs*23|2|0.26|ENSG00000170786|chr8:56306692-56306692|C/-|frameshift_variant'] 47874 6825 IYTSSVNRL True NCI_RA007_Epitope_Rep3 1051.56620882519 1051.5651099358602 33.954 2 0.21507800464595378 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 37156 6722 GVTIKPTVDDD True H1975_Epitope_Rep3 1158.57683307854 1158.5757299358602 30.812 2 0.21507279949570138 0.00036105427849320016 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B'] 53872 18407 KYIDFDHVF True PC9_epitope_Rep4 1182.57095985246 1182.5693249037902 78.868 3 0.21506632387349764 0.00036105427849320016 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 95022 16878 RYQQWMERF True PC9_epitope_Rep5 1342.6240751378198 1342.62296993586 69.932 2 0.21506229190070186 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 85382 8167 QLEDGRTLSDY True H1975_Epitope_Rep3 1295.59935942827 1295.5982699358601 36.394 2 0.21503837108549748 0.00036105427849320016 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 10911 11634 DASVNFSEFSK True NCI_RA007_Epitope_Rep1 1229.5564319871298 1229.55532993586 49.225 2 0.21503647661641545 0.00036105427849320016 0.9438714419765777 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000559968.1_1_14:68082236-68082464:+|nuORF'] 54425 19484 KYSPFVVSF True PC9_epitope_Rep4 1072.5593325396 1072.55822993586 83.061 2 0.21503208685779399 0.00036105427849320016 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 37560 21198 GYPLWKVTF True PC9_epitope_Rep5 1109.59096702105 1109.5898699358602 86.585 2 0.21501443614437285 0.00036105427849320016 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 98286 4671 SIFKQPVTK True NCI_RA007_Epitope_Rep5 1046.61243074162 1046.61132993586 24.65 2 0.215004324892217 0.00036105427849320016 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 96727 8205 SEQFTAM[Oxidation]FR True H1975_Epitope_Rep1 1131.5018946969099 1131.5007899358602 36.503 2 0.21499660946358032 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 24749 16376 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.4960299358602 70.952 2 0.21499560438383086 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 39976 13308 HQQSIPAVL True PC9_epitope_Rep5 991.5450794577898 991.5439899358599 56.201 2 0.21499380492890843 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 22882 5597 EVEVEVESM[Oxidation]DK True H1975_Epitope_Rep1 1308.5755131296398 1308.57440993586 26.596 2 0.21498930366584662 0.00036105427849320016 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 70347 21330 LYPQFM[Oxidation]FHL True PC9_epitope_Rep5 1210.5845021220598 1210.5834099358601 87.102 2 0.21498157456561762 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 14683 9681 DVNQQEFVR True PC9_epitope_Rep3 1133.5465360097699 1133.54542993586 42.186 2 0.21497972251458983 0.00036105427849320016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 52667 18944 KQFEPNDFYL True PC9_epitope_Rep4 1299.6135529404298 1299.61244993586 80.955 2 0.21497649528729088 0.00036105427849320016 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 103667 12865 SRDPNYLNL True PC9_epitope_Rep6 1090.54072235334 1090.5396299358601 61.003 2 0.21496536281163128 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 87446 10789 QTELSQLLK True H1975_Epitope_Rep2 1058.5971746003 1058.5960699358602 46.527 2 0.2149650887900423 0.00036105427849320016 0.9438714419765777 ['ENST00000380591.7_1_5:72801034-72801127:+|nuORF'] 21218 18763 ERFNVPVSL True PC9_epitope_Rep2 1059.5712942056298 1059.57018993586 77.544 2 0.21495769212788501 0.00036105427849320016 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 96632 6037 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 28.199 2 0.21494574468196875 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 94777 20694 RYLPTGSFPF True PC9_epitope_Rep3 1183.6025943339098 1183.6014899358602 84.873 2 0.21494179839133287 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 87837 10799 QVISQAAVVHA True PC9_epitope_Rep3 1121.61930702721 1121.61820993586 46.504 2 0.21493722580689176 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 2046 12522 AELENLVNQAA True H1975_Epitope_Rep1 1170.58806646858 1170.58696993586 53.209 2 0.21493463036274787 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 125737 8114 VNFAM[Oxidation]NVGK True PC9_epitope_Rep1 994.4906017372199 994.48950993586 36.037 2 0.2149224710213123 0.00036105427849320016 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 46188 7363 ITDHLDTQY True H1975_Epitope_Rep1 1104.5087535187201 1104.5076499358602 33.328 2 0.2149198341916067 0.00036105427849320016 0.9438714419765777 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 94793 11528 RYLQTLTTI True NCI_RA007_Epitope_Rep4 1107.62880908175 1107.6277099358601 51.29 2 0.21491237896905982 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 42327 10110 IELAYEQVAKA True H1975_Epitope_Rep3 1233.6605031328497 1233.6594099358601 43.929 2 0.2149074568783098 0.00036105427849320016 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 28163 19596 FRMDIEQSL True PC9_epitope_Rep5 1137.54884450889 1137.54774993586 80.428 2 0.21490406794731606 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 138002 7390 YQAVTATLEEK True H1975_Epitope_Rep1 1251.63468230783 1251.63358993586 33.429 2 0.21489116146389817 0.00036105427849320016 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 5315 13061 ALSGHLETVIL True NCI_RA007_Epitope_Rep1 1151.65502382959 1151.65392993586 54.796 2 0.21487830193802585 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 52649 17732 KQFDKILEL True PC9_epitope_Rep1 1132.6492101731599 1132.64810993586 73.004 2 0.21487740144343218 0.00036105427849320016 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 113834 11807 TREEGTPLTL True PC9_epitope_Rep2 1115.5822528121498 1115.5811499358601 50.747 2 0.21486920917921237 0.00036105427849320016 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 43317 11450 IHEPEPHIL True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 49.04 2 0.21486662952932378 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 86844 13280 QRQDIAFAY True PC9_epitope_Rep4 1110.5458077337798 1110.54470993586 58.977 2 0.21485605628416932 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 124349 19651 VLDSEGYLLFY True H1975_Epitope_Rep3 1317.6492697428098 1317.64816993586 82.319 2 0.21485041536331773 0.00036105427849320016 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 93646 18349 RTFDETVSTYV True PC9_epitope_Rep1 1316.62484590012 1316.6237499358601 75.368 2 0.21484902459002317 0.00036105427849320016 0.9438714419765777 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 95029 7477 RYQTQPVTL True NCI_RA007_Epitope_Rep5 1104.5927579261997 1104.5916699358602 35.441 2 0.21484836327203552 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 69224 16244 LVNELTEFAK True PC9_epitope_Rep4 1162.6233893481399 1162.6222899358602 70.425 2 0.21484800773865678 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 45483 10144 ISEQFTAM[Oxidation]FR True H1975_Epitope_Rep3 1244.58595867404 1244.58486993586 44.063 2 0.21484593772336366 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 106196 13076 SVPIDLQKV True PC9_epitope_Rep6 997.58079626017 997.57968993586 61.902 2 0.21484113153824505 0.00036105427849320016 0.9438714419765777 ['ENSG00000198056|ENST00000338193|PRIM1'] 61221 9574 LLDPSQKNLY True H1975_Epitope_Rep2 1189.63428838501 1189.6331899358602 41.801 2 0.21484090815593263 0.00036105427849320016 0.9438714419765777 ['ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000277462|ENST00000366503|ZNF670'] 2856 13324 AEWLGVLKA True NCI_RA007_Epitope_Rep5 985.5596668927699 985.55856993586 57.932 2 0.21483922042837425 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 104197 16059 SSDGAISLLTY True H1975_Epitope_Rep2 1125.55536935797 1125.55426993586 66.974 2 0.21483450325599993 0.00036105427849320016 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 99534 7272 SLEVENQSLR True NCI_RA007_Epitope_Rep2 1173.59896550545 1173.5978699358602 32.907 2 0.21482391300668757 0.00036105427849320016 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF', 'ENST00000527741.5_1_8:144663279-144663534:-|nuORF'] 7551 17952 ASFNDTFVHV True PC9_epitope_Rep2 1135.5298233164701 1135.52927496793 74.358 1 0.2148212110179712 0.00036105427849320016 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 75342 15424 NQAKYIPEL True PC9_epitope_Rep1 1074.57095985246 1074.5698699358602 64.147 2 0.2148204646669604 0.00036105427849320016 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 49407 18388 KILPDLNTV True PC9_epitope_Rep3 1011.59644632431 1011.59534993586 75.937 2 0.21481491682624093 0.00036105427849320016 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 16775 6008 EFFNGKEPSR True NCI_RA007_Epitope_Rep1 1209.5778361380496 1209.57619490379 27.415 3 0.21480717058122517 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 47227 16929 IYDPNLAFLRF True NCI_RA007_Epitope_Rep3 1367.7237720957498 1367.72266993586 74.456 2 0.21480663677461775 0.00036105427849320016 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 19337 9025 ELNEALELK True H1975_Epitope_Rep1 1057.5655401188499 1057.56444993586 39.621 2 0.2148065692405231 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-7|TP53'] 89354 8203 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 36.495 2 0.2148015504242673 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 39523 19928 HPFDLGLYNEA True PC9_epitope_Rep1 1274.59315184902 1274.5920499358601 81.472 2 0.21479642361615356 0.00036105427849320016 0.9438714419765777 ['ENSG00000106399|ENST00000223129|RPA3'] 21123 20763 ERDPVLWSL True PC9_epitope_Rep5 1113.58185888933 1113.5807699358602 84.917 2 0.21477873021246924 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 74564 9164 NLDDGIDDER True PC9_epitope_Rep5 1160.49456000656 1160.49346993586 40.196 2 0.21477711331383748 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 131956 19289 VYFVAPAKF True PC9_epitope_Rep3 1040.5695033004797 1040.56840993586 79.416 2 0.2147652994495719 0.00036105427849320016 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 28943 13062 FTEQWTDGY True H1975_Epitope_Rep2 1145.4665543535698 1145.46597496793 55.365 1 0.21474802888510494 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 135848 5314 YEQNDRLTP True H1975_Epitope_Rep2 1134.53055159246 1134.5294499358602 25.491 2 0.21474562841611383 0.00036105427849320016 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 9990 9837 AYSSYVHQY True PC9_epitope_Rep2 1116.48762415132 1116.48652993586 43.173 2 0.21474457310719033 0.00036105427849320016 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 24732 11363 FAYDGKDYL True NCI_RA007_Epitope_Rep4 1090.4971262058598 1090.4960299358602 50.622 2 0.21472617009039893 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 71371 8675 MIDETRNSLY True H1975_Epitope_Rep3 1240.5757875327201 1240.57468993586 38.366 2 0.2147188304246595 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 28417 10665 FSDYLHPQY True H1975_Epitope_Rep3 1168.5189242796 1168.5178299358602 46.097 2 0.21471703726435035 0.00036105427849320016 0.9438714419765777 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion'] 135243 12552 YAYDGKDYLAL True H1975_Epitope_Rep2 1290.6132185872598 1290.6121299358601 53.375 2 0.2147151303075694 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 25643 11816 FEWENKVTV True NCI_RA007_Epitope_Rep4 1150.56587447202 1150.56476993586 52.431 2 0.21471066548174905 0.00036105427849320016 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 132838 19720 VYTLLTTHL True PC9_epitope_Rep5 1059.5964463243101 1059.5953499358602 80.898 2 0.21470660785095597 0.00036105427849320016 0.9438714419765777 ['KDM2A-C11orf80|3|fusion', 'KDM2A-C11orf80|2|fusion', 'KDM2A-C11orf80|1|fusion', 'nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 116598 20079 TYGEIFEKF True PC9_epitope_Rep5 1132.54407639828 1132.54357496793 82.283 1 0.21470479839175727 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 22899 9517 EVFEDAAEIR True H1975_Epitope_Rep1 1177.5615173675699 1177.5604299358602 41.529 2 0.21470320097971585 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 98744 4681 [Acetylation]-SIRVTQKSYK True NCI_RA007_Epitope_Rep4 1250.6982859401999 1250.69665490379 24.426 3 0.2147009368165397 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 67381 5108 LTDTPKATSY True H1975_Epitope_Rep2 1095.54480467427 1095.54370993586 24.727 2 0.21468069946694776 0.00036105427849320016 0.9438714419765777 ['ENST00000466854.5_1_3:122081873-122084420:-|nuORF', 'ENST00000460810.1_1_3:122081873-122084409:-|nuORF'] 43027 8365 IGGIGTVPVGR True H1975_Epitope_Rep1 1024.6029286870798 1024.60182993586 37.104 2 0.21467801967372616 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 101789 10168 SPIENIQRV True PC9_epitope_Rep4 1054.57710786206 1054.5760099358602 46.787 2 0.21467401704817027 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 77611 16083 NYVEKGFQI True PC9_epitope_Rep1 1096.5553097883198 1096.5542099358602 66.677 2 0.21465918514230886 0.00036105427849320016 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 93895 22437 RVIDYILDL True PC9_epitope_Rep1 1118.63356010902 1118.6324699358602 91.126 2 0.21465798119554821 0.00036105427849320016 0.9438714419765777 ['ID3|p.Q71K|1|0.16|ENSG00000117318|chr1:23559216-23559216|G/T|missense_variant', 'ENSG00000117318|ENST00000374561|ID3'] 9557 21567 AYALLSHFL True PC9_epitope_Rep5 1033.5596668927699 1033.55856993586 87.997 2 0.21465457211413094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 73020 12766 NDEELNKLLGK True PC9_epitope_Rep4 1271.6721304457099 1271.67049490379 56.968 3 0.21465197908639594 0.00036105427849320016 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 30116 16909 FYPYGLQTF True NCI_RA007_Epitope_Rep4 1134.53859709502 1134.53750993586 73.269 2 0.21464696359391805 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 54214 16676 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 72.309 2 0.2146364387206996 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 104807 6032 STDSETLRY True H1975_Epitope_Rep2 1070.48801807414 1070.4869299358602 28.18 2 0.21463066418167454 0.00036105427849320016 0.9438714419765777 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 93593 20920 RSYDFEFMQV True PC9_epitope_Rep1 1320.58087291316 1320.5797699358602 85.291 2 0.21462957816814396 0.00036105427849320016 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 41035 11638 HYILHNSFF True NCI_RA007_Epitope_Rep4 1176.5716285587998 1176.5705299358601 51.719 2 0.21462331988493719 0.00036105427849320016 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 34616 20473 GQIDLLERL True PC9_epitope_Rep3 1055.59750895347 1055.59640993586 84.007 2 0.21460883293391447 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 113913 14927 TRIGLETSL True PC9_epitope_Rep5 988.55530978832 988.55420993586 62.422 2 0.21460181111002066 0.00036105427849320016 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 136376 18370 YHDINVYSL True PC9_epitope_Rep3 1122.53457434374 1122.53346993586 75.87 2 0.21459993342147626 0.00036105427849320016 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 129408 5857 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 27.516 2 0.21459950429877034 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 32492 7410 GGNFGFGDSR True H1975_Epitope_Rep3 1012.4362572847999 1012.43516993586 33.48 2 0.2145985631414668 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 27528 9946 FPGQLNADLR True H1975_Epitope_Rep1 1129.5880068989297 1129.5869099358601 43.194 2 0.21459396387063018 0.00036105427849320016 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'TUBB6|p.R241C|1|0.58|ENSG00000176014|chr18:12325510-12325510|C/T|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 26765 15742 FLDPITGTFRY True H1975_Epitope_Rep2 1328.67648755016 1328.67538993586 65.723 2 0.214574483033701 0.00036105427849320016 0.9438714419765777 ['ENSG00000138592|ENST00000307179|USP8', 'nc|ENSG00000138592|P40818-2|USP8'] 132834 19813 VYTLLTTHL True PC9_epitope_Rep1 1059.5964463243101 1059.5953499358602 81.026 2 0.21456478459857353 0.00036105427849320016 0.9438714419765777 ['KDM2A-C11orf80|3|fusion', 'KDM2A-C11orf80|2|fusion', 'KDM2A-C11orf80|1|fusion', 'nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 128419 6053 VSEEDVSSRY True H1975_Epitope_Rep2 1169.52004647841 1169.51894993586 28.26 2 0.2145628060692915 0.00036105427849320016 0.9438714419765777 ['ENSG00000177425|ENST00000328827|PAWR'] 31854 6139 GEPTNFVHTA True NCI_RA007_Epitope_Rep3 1071.49852318819 1071.49742993586 31.137 2 0.21455285333984994 0.00036105427849320016 0.9438714419765777 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 103594 11516 SRDKTIIM[Oxidation]W True PC9_epitope_Rep4 1164.59612943492 1164.59502993586 52.059 2 0.2145497417027821 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 86976 16583 QRVPLSVQL True PC9_epitope_Rep5 1038.61857875122 1038.61748993586 68.792 2 0.21454099935009788 0.00036105427849320016 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 34521 5764 GQEDHYNNL True PC9_epitope_Rep2 1088.45230127176 1088.45120993586 27.564 2 0.21452967836616726 0.00036105427849320016 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 22137 13005 ESYSIYVYK True PC9_epitope_Rep6 1150.55464108198 1150.55354993586 61.605 2 0.21452871161609816 0.00036105427849320016 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 7150 13415 AQYLINVRL True NCI_RA007_Epitope_Rep4 1088.63422881536 1088.63312993586 58.781 2 0.2145282014215657 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 113680 13513 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61278993586 63.699 2 0.2145223464012873 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 98520 16972 SILHDVVEV True PC9_epitope_Rep4 1009.54441075145 1009.54330993586 73.273 2 0.21451758994482623 0.00036105427849320016 0.9438714419765777 ['ENST00000572148.1_1_17:4863453-4863890:-|nuORF', 'ENSG00000091640|ENST00000206020|SPAG7'] 36407 16023 GVIDLIFEK True NCI_RA007_Epitope_Rep5 1032.58554728744 1032.5844499358602 68.357 2 0.21451697284477195 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 42193 6860 IEGEGSVLQAK True NCI_RA007_Epitope_Rep1 1129.59790287629 1129.5968099358602 30.688 2 0.21450731655649283 0.00036105427849320016 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 43035 8065 IGGIGTVPVGR True NCI_RA007_Epitope_Rep3 1024.6029286870798 1024.60182993586 38.809 2 0.21449861390414826 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 53207 13202 KTDDLTMVLY True H1975_Epitope_Rep1 1197.59512599497 1197.5940299358601 55.878 2 0.21448244457693247 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 53728 21086 KYEELFPAF True PC9_epitope_Rep1 1142.5648118428596 1142.56370993586 85.937 2 0.21447672664389358 0.00036105427849320016 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 26232 16597 FHYEADGANVL True PC9_epitope_Rep3 1234.5618517207397 1234.56074993586 68.978 2 0.21446783261384758 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 81480 23148 PQPDVFPLF True PC9_epitope_Rep3 1058.54368247546 1058.5425899358602 94.308 2 0.21445335490628178 0.00036105427849320016 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 113766 7705 TRDPQFQKL True PC9_epitope_Rep5 1131.6036569630699 1131.6020249037902 34.58 3 0.21444022529903264 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 102889 11547 SQIDPSSIERA True PC9_epitope_Rep1 1201.5938801250102 1201.59278993586 49.294 2 0.21442535157022236 0.00036105427849320016 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 43670 19394 IIMLEALERV True PC9_epitope_Rep6 1185.67913040245 1185.6780299358602 87.251 2 0.21441522116911285 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 17176 14303 EHAFAVQQL True PC9_epitope_Rep5 1041.5243440132099 1041.5232499358601 60.019 2 0.21441499305689965 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 136444 14447 YHGEVPVSL True PC9_epitope_Rep5 999.5025459394699 999.50144993586 60.572 2 0.21441138695267278 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 116587 20091 TYGEIFEKF True PC9_epitope_Rep3 1132.54407639828 1132.5429699358601 82.532 2 0.2144112032680729 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 54031 14702 KYLSGIAHF True PC9_epitope_Rep1 1034.5549158654999 1034.55380993586 61.371 2 0.21440949554318034 0.00036105427849320016 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 102707 9473 SQDPYHETL True PC9_epitope_Rep5 1088.4774533904401 1088.47634993586 41.395 2 0.21439874032152373 0.00036105427849320016 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 11626 5584 DHASIQM[Oxidation]NV True PC9_epitope_Rep2 1029.45494450449 1029.45384993586 26.868 2 0.2143942650777282 0.00036105427849320016 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 33220 15643 GLADNTVIAKV True PC9_epitope_Rep3 1099.62372370131 1099.62262993586 65.318 2 0.21438532120650178 0.00036105427849320016 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 76303 11158 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.49727496793 47.957 1 0.21438347797003862 0.00036105427849320016 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 4197 20875 AIDPHLLLSV True PC9_epitope_Rep2 1076.6229954253201 1076.62188993586 85.738 2 0.21437848908687346 0.00036105427849320016 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 17040 5100 EGM[Oxidation]NIVEAM[Oxidation]ER True H1975_Epitope_Rep3 1309.5642376337298 1309.5631299358602 24.729 2 0.2143671022167109 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 53878 15445 KYIDQKFVL True PC9_epitope_Rep1 1152.6542955536 1152.65263490379 64.23 3 0.21436282158038786 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 138790 16767 YSDEFGNLDF True H1975_Epitope_Rep3 1205.4876837209702 1205.4865899358601 70.037 2 0.21435566666637193 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 53097 8245 KSDVHLNFY True H1975_Epitope_Rep2 1121.55055876105 1121.54946993586 36.667 2 0.21434823698404792 0.00036105427849320016 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 132006 19596 VYGPLPQSF True PC9_epitope_Rep4 1006.5123823471798 1006.51128993586 83.5 2 0.21434185284881566 0.00036105427849320016 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 22273 3921 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 20.205 2 0.214331706533305 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 89295 5622 RELPFTKSA True H1975_Epitope_Rep2 1047.57129420563 1047.57018993586 26.624 2 0.21432897558719932 0.00036105427849320016 0.9438714419765777 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENST00000506175.1_1_4:69188417-69195784:-|nuORF'] 9462 17825 AVWKESFQV True PC9_epitope_Rep5 1092.56039516876 1092.55928993586 73.583 2 0.21432310210701835 0.00036105427849320016 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 6889 15605 AQIKPFYTV True PC9_epitope_Rep2 1065.5858816406098 1065.58478993586 65.303 2 0.21431901449026675 0.00036105427849320016 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 98094 14190 SHYQSIGVSL True PC9_epitope_Rep2 1089.54547338061 1089.54436993586 59.85 2 0.21429490152872036 0.00036105427849320016 0.9438714419765777 ['ENST00000314471.10_1_19:39842996-39844702:+|nuORF'] 138990 11654 YSFDNLPEKY True H1975_Epitope_Rep2 1274.58191845898 1274.58082993586 49.897 2 0.2142909073878452 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142731|O00444-2|PLK4', 'ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-3|PLK4', 'ENST00000507454.1_1_4:128812246-128813710:+|nuORF'] 4184 10852 AIDEDVLRY True H1975_Epitope_Rep1 1092.54513902744 1092.5440499358601 46.701 2 0.21426781892071653 0.00036105427849320016 0.9438714419765777 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 138664 20913 YRSEGWWTL True PC9_epitope_Rep5 1196.5614577979197 1196.56036993586 85.497 2 0.21426473600664195 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 105626 9571 SVFEDPVISK True NCI_RA007_Epitope_Rep3 1119.58119018299 1119.58008993586 44.733 2 0.2142613904973788 0.00036105427849320016 0.9438714419765777 ['ENSG00000125445|ENST00000245539|MRPS7'] 114008 8231 TRLQQAQAL True PC9_epitope_Rep5 1027.5774422152297 1027.5763499358602 36.6 2 0.21425635663005665 0.00036105427849320016 0.9438714419765777 ['ENSG00000267368|ENST00000340457|UPK3BL1'] 127479 6819 VQTEVNREL True PC9_epitope_Rep4 1086.56693710118 1086.5658499358601 33.445 2 0.21424714715341073 0.00036105427849320016 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 63708 13603 LPQLPITNFSR True H1975_Epitope_Rep1 1284.71902106848 1284.7179299358602 57.453 2 0.21424672901988734 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 60263 11750 LIEEGGLQHLY True H1975_Epitope_Rep2 1270.65575210558 1270.65464993586 50.271 2 0.21424569027875165 0.00036105427849320016 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 41574 5098 IDEM[Oxidation]PEAAVK True H1975_Epitope_Rep3 1117.5325261188498 1117.5314299358602 24.723 2 0.21424532016426517 0.00036105427849320016 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'chr1:156745373-156749864|136|12.4|0.54|4.51|-|0|HDGF,None|3', 'chr1:156745373-156750390|167|12.17|0.49|4.62|-|0|HDGF,None|2', 'chr1:156745373-156751791|144|11.51|0.39|4.87|-|0|HDGF,None|1', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 54231 21318 KYPENFFLL True PC9_epitope_Rep2 1169.61209638845 1169.61098993586 87.464 2 0.21423156163104923 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 104067 9310 SRTSIQSEL True PC9_epitope_Rep1 1019.52473793603 1019.52364993586 40.667 2 0.21422092183927643 0.00036105427849320016 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 137099 10442 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.53280993586 45.119 2 0.21421266011799478 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 94999 13167 RYQDIIHSI True PC9_epitope_Rep4 1143.6036569630699 1143.60254993586 58.544 2 0.21419213409925084 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 117106 13843 TYSEKTTLF True PC9_epitope_Rep5 1088.5389910178399 1088.5378899358602 58.267 2 0.2141906555070432 0.00036105427849320016 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 21198 17523 ERFEIPIKV True PC9_epitope_Rep2 1129.6495445263297 1129.64788490379 72.665 3 0.21418426449965966 0.00036105427849320016 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 10011 15093 AYTLLLHTW True NCI_RA007_Epitope_Rep4 1116.59678067748 1116.59568993586 65.62 2 0.21418211578840995 0.00036105427849320016 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 81478 23003 PQPDVFPLF True PC9_epitope_Rep2 1058.54368247546 1058.5425899358602 93.974 2 0.21418003895888346 0.00036105427849320016 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 104821 10454 STDWHVVNY True H1975_Epitope_Rep2 1119.49852318819 1119.49742993586 45.226 2 0.21417940489363443 0.00036105427849320016 0.9438714419765777 ['ENSG00000147251|ENST00000276202|DOCK11'] 54220 16927 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 71.869 2 0.21417861763559168 0.00036105427849320016 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 83055 16224 PYLFHVVTF True NCI_RA007_Epitope_Rep5 1121.59096702105 1121.5898699358602 69.15 2 0.21416910734501912 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 87836 10048 QVISQAAVVHA True PC9_epitope_Rep2 1121.61930702721 1121.61820993586 43.975 2 0.21416421965437474 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 852 6522 ADGYVLEGK True NCI_RA007_Epitope_Rep2 950.4709114580198 950.46980993586 29.979 2 0.2141576449758276 0.00036105427849320016 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 14194 5762 DSTANEVEAVK True NCI_RA007_Epitope_Rep2 1161.5513466066898 1161.5502499358602 27.03 2 0.21415617687641372 0.00036105427849320016 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 117633 10299 VAIEHLDKI True PC9_epitope_Rep4 1036.59169529704 1036.5905899358602 47.303 2 0.21415126429373416 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 44794 17839 IPTPIVGV True PC9_epitope_Rep6 794.49019035062 794.48908993586 81.246 2 0.2141498433354918 0.00036105427849320016 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 105360 21052 STYKFFEVI True PC9_epitope_Rep1 1132.580461907 1132.57936993586 85.807 2 0.2141365645414544 0.00036105427849320016 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 101386 21424 SMVEDITGLRL True PC9_epitope_Rep1 1232.6434731697198 1232.6423699358602 87.245 2 0.21413505858548593 0.00036105427849320016 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 53982 18295 KYLDEDTIYHL True PC9_epitope_Rep1 1408.68744615668 1408.68634993586 75.161 2 0.21413466728213998 0.00036105427849320016 0.9438714419765777 ['ENSG00000168906|ENST00000306434|MAT2A', 'nc|ENSG00000168906|P31153-2|MAT2A'] 77219 20675 NYIEFTRIL True PC9_epitope_Rep2 1167.62880908175 1167.6277099358601 84.962 2 0.21413404688180077 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 116572 13178 TYGEIFEKF True NCI_RA007_Epitope_Rep3 1132.54407639828 1132.5429699358601 59.108 2 0.21413058615532177 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 87182 20041 QSLEYLEQV True PC9_epitope_Rep5 1107.54480467427 1107.54427496793 82.14 1 0.21411377087596306 0.00036105427849320016 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 86622 16403 QRDVLLTEL True PC9_epitope_Rep6 1085.60807363717 1085.6069699358602 75.488 2 0.21410453189149484 0.00036105427849320016 0.9438714419765777 ['ENSG00000124659|ENST00000372876|TBCC'] 83058 21538 PYLFHVVTF True PC9_epitope_Rep3 1121.59096702105 1121.5898699358602 88.142 2 0.21409077195364562 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 90198 16025 RHIEIFTDL True PC9_epitope_Rep4 1142.6084079903399 1142.60730993586 69.572 2 0.214088609554384 0.00036105427849320016 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 99996 20508 SLITLIEKV True PC9_epitope_Rep4 1014.6324974798599 1014.63140993586 87.033 2 0.21408683218158356 0.00036105427849320016 0.9438714419765777 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 31241 6214 GDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep1 1156.47065413828 1156.4695499358602 28.207 2 0.21408461481510696 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 54511 17955 LAAEFLKQV True PC9_epitope_Rep1 1017.5858816406097 1017.58478993586 73.855 2 0.214079793836433 0.00036105427849320016 0.9438714419765777 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000406551.2_1_6:150201187-150201547:+|nuORF'] 27718 20175 FQDPVPLTV True PC9_epitope_Rep4 1014.5385970950199 1014.53807496793 85.74 1 0.2140784951007661 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 65046 6737 LSDKNIEQY True H1975_Epitope_Rep2 1108.540053647 1108.53894993586 30.829 2 0.21407205307556024 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 140171 8034 YVTIIDAPGHR True NCI_RA007_Epitope_Rep2 1240.6564208119198 1240.65478490379 35.883 3 0.21406624487315667 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF'] 133694 19459 WLAEKLPTL True PC9_epitope_Rep4 1069.61718176889 1069.6160899358601 82.964 2 0.21406264989318896 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 104788 8672 STDPREALQY True H1975_Epitope_Rep2 1178.5567663402999 1178.5556699358601 38.318 2 0.214059615126345 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 115300 17454 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54370993586 72.427 2 0.21403486085104115 0.00036105427849320016 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 17351 11698 EHDSQIVQI True PC9_epitope_Rep2 1067.5247379360299 1067.52364993586 50.329 2 0.21403465378035355 0.00036105427849320016 0.9438714419765777 ['RC3H1|p.P1010Tfs*14|1|0.12|ENSG00000135870|chr1:173943550-173943551|-/G|frameshift_variant', 'nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 41156 19892 HYSENMFSF True PC9_epitope_Rep1 1160.4596951513201 1160.4585899358601 81.333 2 0.21402975347023903 0.00036105427849320016 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 93692 16971 RTLDPLWKV True PC9_epitope_Rep5 1126.6498788795 1126.6487899358601 70.298 2 0.2140287226160809 0.00036105427849320016 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 54433 10407 KYTKIFNDF True NCI_RA007_Epitope_Rep2 1174.60225998074 1174.60116993586 45.073 2 0.21402452330602273 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 40060 16357 HQYDGLVEL True PC9_epitope_Rep4 1072.5189242795998 1072.5178299358602 70.881 2 0.214024401494311 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 97074 13350 SEYLRYEDTLL True H1975_Epitope_Rep1 1400.6823607762399 1400.6812699358602 56.459 2 0.21400702873195757 0.00036105427849320016 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 36423 19902 GVIEKLLTS True PC9_epitope_Rep5 958.5698972233 958.56880993586 81.607 2 0.21400240844692958 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 106694 20417 SYANYFIRL True PC9_epitope_Rep2 1145.58694426977 1145.58584993586 83.961 2 0.21400147014754833 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 24740 16423 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.4960299358602 68.414 2 0.21399315712198191 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 93491 4138 RSIQVDGKTIK True NCI_RA007_Epitope_Rep4 1243.72483472491 1243.72318490379 22.207 3 0.21397975081457674 0.00036105427849320016 0.9438714419765777 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B', 'ENST00000598706.1_1_19:8455252-8465174:+|nuORF'] 76547 12858 NTDPSIVMTY True H1975_Epitope_Rep2 1139.51687567427 1139.51637496793 54.568 1 0.21397529744911287 0.00036105427849320016 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 140910 14497 YYVWLQHTL True NCI_RA007_Epitope_Rep4 1221.61824439805 1221.6171499358602 63.121 2 0.21397355305125643 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000003402|O15519-4|CFLAR', 'nc|ENSG00000003402|O15519-15|CFLAR', 'nc|ENSG00000003402|O15519-8|CFLAR', 'ENSG00000003402|ENST00000309955|CFLAR'] 83168 11892 PYTKVEESF True PC9_epitope_Rep1 1098.5233409536997 1098.5222499358601 50.609 2 0.21396376358607114 0.00036105427849320016 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 5074 20477 ALLPHLYTL True PC9_epitope_Rep2 1039.60661708519 1039.6055299358602 84.195 2 0.21396250125252747 0.00036105427849320016 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 102509 9008 SPYSGPKFNSA True PC9_epitope_Rep2 1153.54038800017 1153.53928993586 40.0 2 0.21395697404071334 0.00036105427849320016 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 67555 9244 LTEQRALLY True H1975_Epitope_Rep2 1105.6131590176099 1105.61206993586 40.514 2 0.21394090704113347 0.00036105427849320016 0.9438714419765777 ['ENSG00000196663|ENST00000359520|TECPR2', 'nc|ENSG00000196663|O15040-2|TECPR2'] 131849 18456 VYAVIPAEKF True PC9_epitope_Rep3 1135.62774645259 1135.62664993586 76.195 2 0.21393251000627825 0.00036105427849320016 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 117224 19888 TYVENLRLL True PC9_epitope_Rep3 1119.62880908175 1119.6277099358601 81.738 2 0.2139223754838581 0.00036105427849320016 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 29677 20875 FVNDIFERI True PC9_epitope_Rep5 1151.59750895347 1151.59640993586 85.348 2 0.21391860086573924 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 52589 16828 KPYNVYITV True PC9_epitope_Rep1 1095.59644632431 1095.5953499358602 69.553 2 0.2139143375586252 0.00036105427849320016 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 61417 5247 LLEQYKEESK True NCI_RA007_Epitope_Rep1 1265.6503323719696 1265.6486849037901 24.493 3 0.21390741190941576 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 53249 14672 KTFSEILNRV True PC9_epitope_Rep2 1205.67682190333 1205.6751749037899 61.701 3 0.21390524794452787 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 42787 21993 IFIDPGYQTF True PC9_epitope_Rep1 1199.58627556343 1199.5851699358602 89.417 2 0.2139013950004549 0.00036105427849320016 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 17278 21601 EHDDFFISL True PC9_epitope_Rep3 1121.50293986229 1121.50184993586 88.383 2 0.2138948697914895 0.00036105427849320016 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.E233D|1|0.61|ENSG00000125676|chrX:123686617-123686617|T/G|missense_variant'] 24734 17016 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.4960299358602 70.276 2 0.21389061436020243 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 2302 5198 AEQAERYDDM True H1975_Epitope_Rep2 1226.48736645114 1226.48626993586 25.065 2 0.2138816639992035 0.00036105427849320016 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 997 8200 AEAEFYRQV True H1975_Epitope_Rep2 1111.5298233164701 1111.5287299358602 36.494 2 0.21387297211789402 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENST00000442018.5_2_X:39911364-39913101:-|nuORF'] 60682 16433 LIVKEWNSV True PC9_epitope_Rep5 1086.60734536118 1086.6062499358602 68.208 2 0.21386632044539008 0.00036105427849320016 0.9438714419765777 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 113847 15463 TREGETIIEL True PC9_epitope_Rep4 1159.6084675599898 1159.60736993586 67.407 2 0.2138425556641931 0.00036105427849320016 0.9438714419765777 ['CD47|p.V146Cfs*18|1|0.19|ENSG00000196776|chr3:108071147-108071148|-/A|frameshift_variant', 'nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47'] 2430 5543 AEQLRMEET True H1975_Epitope_Rep3 1105.5073736197298 1105.50626993586 26.37 2 0.21383902419513362 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 96394 15669 SEHWLVLVP True NCI_RA007_Epitope_Rep5 1078.5811306133398 1078.58002993586 66.987 2 0.2138381260762962 0.00036105427849320016 0.9438714419765777 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 65424 4671 LSEVNRTGTQY True H1975_Epitope_Rep2 1266.62042922602 1266.6193299358602 23.063 2 0.21381440545707855 0.00036105427849320016 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8'] 8041 10338 ATDWGDTQAY True H1975_Epitope_Rep1 1126.4567179458597 1126.45562993586 44.712 2 0.21380741371378548 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 83863 8149 QEHITTVVV True H1975_Epitope_Rep2 1024.5553097883198 1024.5542099358602 36.295 2 0.21380379599735191 0.00036105427849320016 0.9438714419765777 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000479285.5_1_1:114438859-114442862:-|nuORF'] 30200 20884 FYVPAEPKLAF True PC9_epitope_Rep5 1280.68051030144 1280.6794099358601 85.382 2 0.21380039480597077 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 94707 8718 RYLEQLHQL True NCI_RA007_Epitope_Rep4 1198.64585612822 1198.64474993586 40.326 2 0.21379717106663595 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 132320 18842 VYLPNINKI True PC9_epitope_Rep3 1072.62808080576 1072.6269899358601 77.698 2 0.21379440112632378 0.00036105427849320016 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 54093 21199 KYMDINFDF True PC9_epitope_Rep5 1191.52704643515 1191.5259499358601 86.589 2 0.21379265644939732 0.00036105427849320016 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 106836 22186 SYIALPLTL True PC9_epitope_Rep4 989.57973363101 989.57918496793 93.585 1 0.21378477162046025 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 12327 19396 DIVAINDPFI True H1975_Epitope_Rep1 1115.58627556343 1115.5851699358602 80.788 2 0.21377565445448046 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF', 'ENST00000438477.2_1_1:120039232-120039448:-|nuORF', 'ENST00000423411.2_1_6:135941072-135941228:-|nuORF'] 77575 21071 NYSPYVNYF True PC9_epitope_Rep5 1165.50802524273 1165.5069299358602 86.11 2 0.21377520542924378 0.00036105427849320016 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 96753 9018 SEQLDQPISA True H1975_Epitope_Rep2 1086.51931820242 1086.5187749679299 39.639 1 0.21376121007504884 0.00036105427849320016 0.9438714419765777 ['ENST00000462438.1_1_20:55948707-55953152:+|nuORF', 'ENSG00000101146|ENST00000395841|RAE1'] 76757 10037 NTVELLVEDK True H1975_Epitope_Rep1 1158.6132185872598 1158.6121299358601 43.546 2 0.213757679208482 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 67160 15105 LTDEYDTVLAY True H1975_Epitope_Rep2 1301.60271347321 1301.60160993586 63.256 2 0.2137565474263226 0.00036105427849320016 0.9438714419765777 ['ENSG00000012963|ENST00000013070|UBR7'] 71567 9037 MLDSHEELY True H1975_Epitope_Rep1 1135.48557554599 1135.48446993586 39.668 2 0.21375625779689963 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 23752 21633 EYIQFVPLL True PC9_epitope_Rep6 1120.6168474157198 1120.61574993586 96.096 2 0.2137466467712975 0.00036105427849320016 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 137103 10502 YLDDPDLKY True H1975_Epitope_Rep2 1140.5339056374 1140.5333749679298 45.414 1 0.2137419885910493 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 138089 17813 YQEVEIASV True PC9_epitope_Rep1 1036.5076908895599 1036.5065899358601 73.313 2 0.21373715681383035 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 17445 16551 EHGDQDYIW True PC9_epitope_Rep3 1161.47270236317 1161.4716099358602 68.803 2 0.213734074581165 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 132016 14630 VYGSFASKL True PC9_epitope_Rep1 970.5123823471799 970.51128993586 61.098 2 0.21373276787950374 0.00036105427849320016 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 38617 9667 HHIVSIEV True PC9_epitope_Rep4 932.50796567308 932.50686993586 44.811 2 0.213727834719394 0.00036105427849320016 0.9438714419765777 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 3839 14968 AGYTDNLVRV True PC9_epitope_Rep1 1106.57202248162 1106.57092993586 62.395 2 0.21372709446908647 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 67344 8266 LTDRELEEY True H1975_Epitope_Rep3 1166.54553295026 1166.54442993586 36.781 2 0.21372517404484584 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 61870 11182 LLLEPYNKY True H1975_Epitope_Rep3 1151.62266107215 1151.6215699358602 48.109 2 0.2137176142351584 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 109795 6270 THITAQTAV True PC9_epitope_Rep5 940.4977949122 940.49668993586 29.094 2 0.21371335239952227 0.00036105427849320016 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 47635 20513 IYPHGLVLL True PC9_epitope_Rep5 1023.61170246563 1023.61060993586 83.945 2 0.21371242739470925 0.00036105427849320016 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 3045 9991 AFVTFDDHD True NCI_RA007_Epitope_Rep3 1065.4403396057298 1065.43924993586 46.388 2 0.2137121659497791 0.00036105427849320016 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 98495 10809 SILEDYANYK True NCI_RA007_Epitope_Rep3 1214.5819184589798 1214.58082993586 49.565 2 0.21369473533052782 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 25642 11594 FEWENKVTV True NCI_RA007_Epitope_Rep3 1150.56587447202 1150.56476993586 52.732 2 0.21368961277197446 0.00036105427849320016 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 67208 9322 LTDITKGVQY True H1975_Epitope_Rep3 1136.607739284 1136.60664993586 40.854 2 0.21368846345638307 0.00036105427849320016 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 98093 15791 SHYFQSLEV True PC9_epitope_Rep4 1108.5189242796 1108.5178299358602 68.666 2 0.2136878993941649 0.00036105427849320016 0.9438714419765777 ['ENSG00000168612|ENST00000372523|ZSWIM1'] 116602 17889 TYGEIFEKF True PC9_epitope_Rep6 1132.54407639828 1132.54357496793 81.436 1 0.21368344766303968 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 28891 16142 FTDVPSIQIY True H1975_Epitope_Rep3 1181.5968402471299 1181.59574993586 67.547 2 0.21367976927540827 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163539|O75122-2|CLASP2', 'nc|ENSG00000163539|O75122|CLASP2', 'ENSG00000163539|ENST00000682230|CLASP2', 'nc|ENSG00000163539|O75122-3|CLASP2'] 9772 18003 AYLEAYKEF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 74.042 2 0.21367397135847946 0.00036105427849320016 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 22262 5178 ETDRGMSAEY True H1975_Epitope_Rep2 1157.46590273057 1157.46480993586 24.992 2 0.21366871464511403 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 139376 5292 YTDVSTRY True H1975_Epitope_Rep3 1003.46107505031 1003.45996993586 25.435 2 0.21366790137846953 0.00036105427849320016 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 116714 21996 TYKNFFYLI True PC9_epitope_Rep5 1207.62774645259 1207.62664993586 89.634 2 0.21366214767628072 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 94716 12170 RYLEQLHQL True PC9_epitope_Rep2 1198.64585612822 1198.64474993586 52.123 2 0.2136540303542616 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 72770 12964 NAENEFVTIK True PC9_epitope_Rep3 1163.58225281215 1163.5811499358601 54.891 2 0.21364734459356635 0.00036105427849320016 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 7823 13030 ATADYICKV True PC9_epitope_Rep5 982.4793679667399 982.47826993586 55.124 2 0.21364193027366515 0.00036105427849320016 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 10063 12309 AYVHMVTHF True PC9_epitope_Rep2 1103.52223583823 1103.52112993586 52.66 2 0.2136385252122053 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 72232 13522 MRYNEKELQAL True PC9_epitope_Rep3 1393.70238502817 1393.70074490379 57.063 3 0.21363687698690167 0.00036105427849320016 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 7839 4839 ATAGIIGVNRK True NCI_RA007_Epitope_Rep4 1098.65094150866 1098.6498499358602 25.05 2 0.21363296853062608 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 29782 7944 FVTATDVVR True H1975_Epitope_Rep1 1006.5447451046199 1006.54364993586 35.507 2 0.21363160733747905 0.00036105427849320016 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1'] 31816 5617 GEMMVEQRAA True NCI_RA007_Epitope_Rep4 1120.50051441748 1120.49940993586 28.207 2 0.21362815922882533 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'ENST00000569319.5_1_16:70399881-70405886:+|nuORF', 'ENST00000569771.5_1_16:70395504-70405886:+|nuORF', 'nc|ENSG00000260537|Q9UMR2-3|DDX19B', 'nc|ENSG00000168872|Q9NUU7-2|DDX19A', 'ENST00000562140.2_1_16:70398455-70404584:+|nuORF'] 16562 9260 EEQLQQIRAE True PC9_epitope_Rep3 1242.6204292260197 1242.6193299358602 40.563 2 0.21362178123253378 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 119103 9028 VEIEDINDHTP True H1975_Epitope_Rep2 1280.5884603913998 1280.5873699358601 39.678 2 0.2136217562124055 0.00036105427849320016 0.9438714419765777 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB4|p.A557Gfs*30|1|0.19|ENSG00000253953|chr5:141389554-141389554|C/-|frameshift_variant', 'PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 132773 15097 VYSQFITQL True NCI_RA007_Epitope_Rep3 1097.5757108797297 1097.57460993586 66.87 2 0.21361409136778256 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 69834 13936 LYADVGGKQF True PC9_epitope_Rep1 1096.55530978832 1096.5542099358602 58.441 2 0.21361404164203 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 138943 6142 YSEGYPGQRY True H1975_Epitope_Rep1 1218.53055159246 1218.5294499358602 28.695 2 0.21360187903045535 0.00036105427849320016 0.9438714419765777 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF', 'ENST00000419974.2_1_1:44317163-44317268:-|nuORF', 'ENST00000395682.3_1_17:18256945-18259295:-|nuORF'] 73769 15908 NHASLISAL True PC9_epitope_Rep5 924.50288029264 924.50178993586 66.183 2 0.21359359271632092 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 70987 6519 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep1 1282.5975859869 1282.59648993586 30.136 2 0.2135811584490477 0.00036105427849320016 0.9438714419765777 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 28436 8303 FSEEQLNRY True H1975_Epitope_Rep3 1184.5462016565998 1184.5451099358602 36.921 2 0.21357173456839113 0.00036105427849320016 0.9438714419765777 ['ENSG00000064995|ENST00000361288|TAF11', 'nc|ENSG00000064995|Q15544-2|TAF11'] 132022 12867 VYGSFASKL True PC9_epitope_Rep4 970.5123823471799 970.51128993586 57.366 2 0.21355461510537224 0.00036105427849320016 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 135556 6513 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 29.968 2 0.21355134013681834 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 75989 14307 NRIEELNQSL True PC9_epitope_Rep1 1214.62551460646 1214.62440993586 59.857 2 0.21354651700176167 0.00036105427849320016 0.9438714419765777 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L', 'ENST00000543152.5_1_16:19590306-19619547:+|nuORF'] 10096 20963 AYVLNIVRF True PC9_epitope_Rep5 1093.62841515893 1093.62730993586 85.694 2 0.2135348622774281 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 49309 10214 KHTEMITTL True PC9_epitope_Rep1 1072.5586809166 1072.55758993586 44.168 2 0.21353400153996718 0.00036105427849320016 0.9438714419765777 ['ENSG00000164985|ENST00000380733|PSIP1'] 3478 14690 [Acetylation]-AGLNSLEAVKR True PC9_epitope_Rep1 1198.66698581192 1198.6658899358602 61.326 2 0.21353232057644195 0.00036105427849320016 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 116787 22353 TYLPREILNLI True PC9_epitope_Rep2 1343.7812869718698 1343.78018993586 91.47 2 0.21352643409502328 0.00036105427849320016 0.9438714419765777 ['ENSG00000163428|ENST00000295628|LRRC58'] 27698 16031 FQDKDQVFI True PC9_epitope_Rep1 1138.56587447202 1138.56476993586 66.475 2 0.21352102774659817 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 4204 11548 AIDQLHLEY True H1975_Epitope_Rep1 1100.5502244078798 1100.54912993586 49.405 2 0.21352061344993817 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 113294 14573 TQIDHYVGI True PC9_epitope_Rep2 1044.52400966004 1044.52290993586 61.325 2 0.2135139104873172 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 85007 9707 QIFNGTFVK True NCI_RA007_Epitope_Rep3 1052.5654805492 1052.5643899358602 45.256 2 0.2135116808838721 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 14644 9385 DVNAAIATIK True H1975_Epitope_Rep3 1014.57095985246 1014.56986993586 41.1 2 0.21351149064965302 0.00036105427849320016 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 40822 14801 HVLDDFVKV True PC9_epitope_Rep6 1070.5760452329 1070.57494993586 68.902 2 0.21350839165118962 0.00036105427849320016 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 140683 10790 YYPTEDVPR True PC9_epitope_Rep1 1138.5294889632999 1138.52838993586 46.392 2 0.2135069588306114 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 70884 11537 MEHPYFYTV True H1975_Epitope_Rep1 1185.5164817514499 1185.5153899358602 49.361 2 0.21349944548209715 0.00036105427849320016 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 89683 8701 REWGEELQA True NCI_RA007_Epitope_Rep4 1116.5199869087598 1116.5188899358602 40.258 2 0.21349309187485413 0.00036105427849320016 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 131894 19262 VYEEILHQI True PC9_epitope_Rep1 1142.5971746003 1142.5960699358602 78.893 2 0.21348726124499381 0.00036105427849320016 0.9438714419765777 ['ENSG00000135842|ENST00000367511|NIBAN1'] 71721 5180 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 25.021 2 0.21348582139895392 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 123802 5430 VITIM[Oxidation]QNPR True NCI_RA007_Epitope_Rep5 1086.58556475122 1086.5844699358602 27.574 2 0.2134855457037979 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 26228 16493 FHYEADGANVL True PC9_epitope_Rep1 1234.5618517207397 1234.56074993586 68.265 2 0.21348494862044087 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 53588 11312 KVVDVDVKL True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 51.289 2 0.21347393789287122 0.00036105427849320016 0.9438714419765777 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 105888 20156 SVLDDKLVFV True PC9_epitope_Rep4 1133.63322575585 1133.6321299358601 85.667 2 0.2134711704312418 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 40355 6517 HRTELETKL True PC9_epitope_Rep1 1125.61422164677 1125.61258490379 29.871 3 0.21345347333844888 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 140273 14026 YYAEVETRI True PC9_epitope_Rep1 1142.5607890915799 1142.5596899358602 58.79 2 0.21343295599862613 0.00036105427849320016 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 32316 10380 GFVTFDDHD True NCI_RA007_Epitope_Rep5 1051.42468954159 1051.42358993586 46.555 2 0.21342342627032768 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 43994 12805 ILHENFTTV True PC9_epitope_Rep4 1072.55530978832 1072.5542099358602 57.115 2 0.2134152848334484 0.00036105427849320016 0.9438714419765777 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 44331 8477 IM[Oxidation]ELINNVAK True NCI_RA007_Epitope_Rep1 1159.6270952100301 1159.6259899358602 36.973 2 0.21339800950105797 0.00036105427849320016 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 118511 8059 VDSRWQEY True H1975_Epitope_Rep2 1081.4828731240498 1081.48176993586 35.947 2 0.21337858446341074 0.00036105427849320016 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000485063.1_1_1:39748843-39749872:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 24187 21419 EYTRALFLL True PC9_epitope_Rep1 1124.62299542532 1124.62188993586 87.225 2 0.21337326832386144 0.00036105427849320016 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2'] 72878 5591 NASTDYDLSDK True H1975_Epitope_Rep3 1227.52552578167 1227.52442993586 26.547 2 0.21337100161122666 0.00036105427849320016 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF', 'ENST00000474162.1_1_5:60686735-60687614:-|nuORF'] 94839 11039 RYMEVSGNL True PC9_epitope_Rep4 1067.5069796969099 1067.50588993586 50.237 2 0.2133659441764545 0.00036105427849320016 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3'] 112131 21441 TLVDEVFRI True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 87.946 2 0.2133622781937461 0.00036105427849320016 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2', 'RPA2|p.G67W|1|0.2|ENSG00000117748|chr1:27907201-27907201|C/A|missense_variant'] 54023 11207 KYLPESNTL True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 48.434 2 0.21335854570592533 0.00036105427849320016 0.9438714419765777 ['ENST00000324677.11_1_17:28011643-28088245:-|nuORF', 'ENST00000269033.7_1_17:28011643-28257046:-|nuORF'] 109887 12268 THNIIVNQL True PC9_epitope_Rep4 1050.5821932425 1050.58108993586 55.006 2 0.21335788871766875 0.00036105427849320016 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 93962 6461 RVLTSVFTK True NCI_RA007_Epitope_Rep3 1049.62332977849 1049.62222993586 32.444 2 0.21335252966750815 0.00036105427849320016 0.9438714419765777 ['ENSG00000178573|ENST00000326043|MAF'] 13011 11157 DLQM[Oxidation]VNISLR True H1975_Epitope_Rep3 1203.62815783919 1203.6270699358602 48.01 2 0.21334808882359513 0.00036105427849320016 0.9438714419765777 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2'] 89483 7094 REQLPPTTV True H1975_Epitope_Rep3 1039.5662088251897 1039.5651099358602 32.256 2 0.21334515162652112 0.00036105427849320016 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 19980 11635 EMEEKYYRF True PC9_epitope_Rep2 1293.5699738762899 1293.56833490379 50.081 3 0.213317535378486 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 71553 5915 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 27.823 2 0.21331734152531442 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 77504 17168 NYQGHFHLF True PC9_epitope_Rep1 1161.5355774032498 1161.5344899358602 70.857 2 0.21331698897863907 0.00036105427849320016 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 4171 5895 AIAQAESLRYK True NCI_RA007_Epitope_Rep4 1248.6826355597598 1248.68152993586 29.298 2 0.21330599455871574 0.00036105427849320016 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 94850 10879 RYMPQNPHII True PC9_epitope_Rep2 1267.6495616096697 1267.64791490379 47.163 3 0.2133026932532113 0.00036105427849320016 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 39671 10072 HPTEDLVVSA True PC9_epitope_Rep2 1066.5294889632999 1066.52838993586 44.071 2 0.21329967764587499 0.00036105427849320016 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 139291 8379 YTDKIMTY True H1975_Epitope_Rep3 1033.47903361357 1033.4779299358602 37.213 2 0.21329499621944822 0.00036105427849320016 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 90156 19183 RHDDYLVML True PC9_epitope_Rep3 1160.5648289262 1160.56318490379 79.005 3 0.21329163489153893 0.00036105427849320016 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 52665 19665 KQFEPNDFYL True PC9_epitope_Rep2 1299.6135529404298 1299.61244993586 81.026 2 0.21329105937103138 0.00036105427849320016 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 41856 18941 IDTIEIITDR True PC9_epitope_Rep3 1187.63976768827 1187.6386699358602 78.082 2 0.2132762252920374 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 110996 7384 TLDENPGVRY True H1975_Epitope_Rep2 1162.56185172074 1162.56074993586 33.343 2 0.21327413054502128 0.00036105427849320016 0.9438714419765777 ['ENSG00000116266|ENST00000370008|STXBP3'] 100327 9992 SLMHSFILK True NCI_RA007_Epitope_Rep5 1074.5895871220598 1074.58848993586 45.076 2 0.2132740090574807 0.00036105427849320016 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 44063 21653 ILLKDILSV True PC9_epitope_Rep5 1012.65323292444 1012.65212993586 88.333 2 0.2132727508714305 0.00036105427849320016 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant', 'ATM|p.Q1116Sfs*10|1|0.39|ENSG00000149311|chr11:108279550-108279550|T/-|frameshift_variant'] 70160 22104 LYLEPQGTLF True PC9_epitope_Rep2 1179.6175756917098 1179.61646993586 90.496 2 0.21327008514512694 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 17748 8123 EHTNAIGTL True PC9_epitope_Rep2 954.4770594676199 954.47596993586 36.603 2 0.21325468300185402 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 70110 20220 LYIVEPLKF True PC9_epitope_Rep4 1120.6532329244399 1120.65212993586 85.915 2 0.21325051217761914 0.00036105427849320016 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 89260 4816 RELDVEEAHAA True H1975_Epitope_Rep2 1238.58912909774 1238.58748490379 23.614 3 0.21324717527484202 0.00036105427849320016 0.9438714419765777 ['ENSG00000110063|ENST00000263579|DCPS'] 124553 7326 VLGM[Oxidation]DPLPSK True H1975_Epitope_Rep1 1071.56343232431 1071.5623299358601 33.188 2 0.2132451824628818 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 77569 20838 NYSPYVNYF True PC9_epitope_Rep2 1165.50802524273 1165.5069299358602 85.599 2 0.2132426502149359 0.00036105427849320016 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 109857 16290 THMELYSQL True PC9_epitope_Rep5 1120.52229540788 1120.52118993586 67.653 2 0.21324221103301755 0.00036105427849320016 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 68802 6986 LVDQRVAEY True H1975_Epitope_Rep2 1091.56112344475 1091.56002993586 31.795 2 0.21323752536421053 0.00036105427849320016 0.9438714419765777 ['ENSG00000143157|ENST00000367876|POGK'] 30134 16652 FYQPKIQQF True PC9_epitope_Rep2 1197.61824439805 1197.6171499358602 69.295 2 0.21323440492837745 0.00036105427849320016 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 104625 9914 SSVPGVRLLQ True NCI_RA007_Epitope_Rep3 1054.61349337078 1054.6123899358602 46.081 2 0.21323347449372185 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 68733 9188 LVDGYNVHY True H1975_Epitope_Rep3 1078.5083595959002 1078.5072699358602 40.332 2 0.21322524911828464 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB', 'ENST00000538021.5_2_11:72004413-72018253:-|nuORF'] 54061 21156 KYLTEGLLQF True PC9_epitope_Rep5 1210.65977485686 1210.6586699358602 86.429 2 0.21322227834965374 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 123820 20652 VIVELIYKV True PC9_epitope_Rep5 1074.6688829885798 1074.6677899358601 84.491 2 0.21321909706161915 0.00036105427849320016 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 37557 20909 GYPLWKVTF True PC9_epitope_Rep2 1109.59096702105 1109.5898699358602 85.872 2 0.21320423923767556 0.00036105427849320016 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 132685 15894 VYRTVIEYY True PC9_epitope_Rep2 1204.6128246644398 1204.61172993586 66.389 2 0.21319906152767126 0.00036105427849320016 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20'] 128352 13068 VSDPLIGGTY True H1975_Epitope_Rep2 1020.5127762699999 1020.51227496793 55.388 1 0.21319699027126598 0.00036105427849320016 0.9438714419765777 ['ENSG00000169359|ENST00000643144|SLC33A1'] 747 7415 [Acetylation]-AAVQAAEVK True H1975_Epitope_Rep3 927.5025462557699 927.50144993586 33.5 2 0.21319564690732185 0.00036105427849320016 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'ENST00000568682.5_2_16:75676732-75681537:-|nuORF'] 87091 12558 QSELVGQLY True H1975_Epitope_Rep3 1035.52367530687 1035.52317496793 53.504 1 0.21319461206624382 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 128337 9177 VSDLLHQY True H1975_Epitope_Rep2 973.4868958753302 973.48578993586 40.252 2 0.21319063584620668 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'PSMB8|p.D263Y|1|0.52|ENSG00000204264|chr6:32841003-32841003|C/A|missense_variant'] 46963 9917 IVNDFAYMK True NCI_RA007_Epitope_Rep4 1099.53721719603 1099.5361099358602 44.992 2 0.21318408409270345 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10', 'ENST00000534816.1_1_8:146220430-146220868:+|nuORF', 'ENST00000555873.1_1_14:75601590-75605782:-|nuORF', 'ENST00000555036.1_1_14:75602424-75614456:-|nuORF', 'ENST00000556969.5_1_14:75601590-75614465:-|nuORF'] 107325 22732 SYRELFEFF True PC9_epitope_Rep1 1236.5815245361598 1236.5804299358601 92.243 2 0.21318042568715373 0.00036105427849320016 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 129193 6026 VTDGPGNYKY True H1975_Epitope_Rep3 1112.51383889916 1112.51274993586 28.194 2 0.21316449758227263 0.00036105427849320016 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 135783 8153 YENEVALRQ True PC9_epitope_Rep3 1120.5512870370399 1120.55018993586 36.339 2 0.2131553801479865 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 135543 6202 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 28.925 2 0.21315426072112956 0.00036105427849320016 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 90153 19087 RHDDYLVML True PC9_epitope_Rep1 1160.5648289262 1160.56318490379 78.209 3 0.21314640255850997 0.00036105427849320016 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 44962 20945 IQHDLIFSL True PC9_epitope_Rep3 1084.5916952970401 1084.5905899358602 85.843 2 0.21314599051555091 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 4356 12000 AIPQLQGYLR True NCI_RA007_Epitope_Rep5 1157.6556925359298 1157.65458993586 52.819 2 0.2131377310673759 0.00036105427849320016 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000431036.1_1_22:45298215-45298323:+|nuORF'] 76316 5515 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 26.225 2 0.21312388282165934 0.00036105427849320016 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 89171 10378 REIDDYIVQA True H1975_Epitope_Rep1 1220.6037165327198 1220.60260993586 44.868 2 0.21312321561010109 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 112051 15183 TLTEEGVIKV True PC9_epitope_Rep3 1087.6124903112698 1087.6113899358602 63.546 2 0.21312117364284158 0.00036105427849320016 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 103408 19839 SQYEEQFVTL True PC9_epitope_Rep4 1242.5768330785397 1242.5757299358602 84.441 2 0.2131203967510396 0.00036105427849320016 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 114185 5849 TRTNHIETL True PC9_epitope_Rep5 1083.56727145435 1083.5661699358602 27.491 2 0.21311877573794252 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 69840 12592 LYADVGGKQF True PC9_epitope_Rep4 1096.55530978832 1096.5542099358602 56.264 2 0.2131126940335918 0.00036105427849320016 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 44092 9455 ILMEHIHKL True PC9_epitope_Rep2 1132.64268532408 1132.64104490379 41.707 3 0.21309967361501475 0.00036105427849320016 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 76644 23267 NTIEHLLPLFL True PC9_epitope_Rep1 1308.7441731871597 1308.7430699358601 94.282 2 0.21309946007504357 0.00036105427849320016 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF'] 105400 19942 SVADYFKQI True PC9_epitope_Rep2 1069.54441075145 1069.54387496793 82.104 1 0.21308471713946756 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 77076 20513 NWPSRPYLF True PC9_epitope_Rep3 1178.58727862294 1178.5861899358601 84.165 2 0.2130813079793696 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 3840 14334 AGYTDNLVRV True PC9_epitope_Rep2 1106.57202248162 1106.57092993586 60.4 2 0.21307800812880037 0.00036105427849320016 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 28802 16836 FTDESYLELY True H1975_Epitope_Rep2 1278.5655996885 1278.56450993586 70.007 2 0.213071752815793 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 138732 7281 YSADREDLY True H1975_Epitope_Rep2 1130.48801807414 1130.4869299358602 32.944 2 0.21306694811971336 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 29670 20954 FVNDIFERI True PC9_epitope_Rep1 1151.59750895347 1151.59640993586 85.423 2 0.21306503268114513 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 106579 8254 SVYDSVLQK True NCI_RA007_Epitope_Rep3 1037.5393253710097 1037.53822993586 39.596 2 0.21304841805877273 0.00036105427849320016 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 1230 7477 AEDGSRVYVV True H1975_Epitope_Rep2 1093.54038800017 1093.53928993586 33.708 2 0.2130442463268837 0.00036105427849320016 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF'] 52793 13121 KQTALVELLK True PC9_epitope_Rep2 1141.7070594024499 1141.7054249037901 55.744 3 0.213036861532878 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 41850 12147 IDTIEIITDR True NCI_RA007_Epitope_Rep4 1187.63976768827 1187.6386699358602 53.721 2 0.21303522130023597 0.00036105427849320016 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 67567 8059 LTEQYNEQY True H1975_Epitope_Rep3 1186.51423282198 1186.5131299358602 35.973 2 0.21302777533196426 0.00036105427849320016 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 21550 14563 ERSDLEYQL True PC9_epitope_Rep3 1151.54586730343 1151.5447699358601 61.145 2 0.21302007496082032 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 67171 11418 LTDFIREEY True H1975_Epitope_Rep2 1184.57135377528 1184.5702499358601 48.971 2 0.21301942901606988 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 7752 11374 ASVAWAVLK True NCI_RA007_Epitope_Rep4 943.5491022090699 943.54800993586 50.663 2 0.21301238982512746 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3', 'ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B'] 115761 14177 TVLQKMNEI True PC9_epitope_Rep5 1074.57433098074 1074.5732299358601 59.541 2 0.21300841519400923 0.00036105427849320016 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 102709 17466 SQDSFYRVL True PC9_epitope_Rep1 1113.54547338061 1113.54436993586 71.98 2 0.21299749767009213 0.00036105427849320016 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 65582 12385 LSGHLETVIL True NCI_RA007_Epitope_Rep1 1080.61791004488 1080.6168099358601 52.15 2 0.21299601011345967 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 60172 11975 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 53.853 2 0.2129946731492225 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 10071 11075 AYVHMVTHF True PC9_epitope_Rep6 1103.52223583823 1103.52112993586 53.518 2 0.2129863848589774 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 9913 12131 AYPHNLMTF True NCI_RA007_Epitope_Rep4 1092.50625142092 1092.5051499358601 53.657 2 0.21297386320694237 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 114853 9766 TTDGKLPEV True PC9_epitope_Rep5 958.4971262058599 958.49602993586 42.537 2 0.2129728793733519 0.00036105427849320016 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 83015 14064 PYITEHTGF True PC9_epitope_Rep5 1063.49746055903 1063.49636993586 59.111 2 0.21296419316606605 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104299|Q9NV88-3|INTS9', 'ENSG00000104299|ENST00000521022|INTS9', 'ENST00000520983.5_1_8:28651295-28747426:-|nuORF', 'nc|ENSG00000104299|Q9NV88-2|INTS9'] 7502 7305 ASEFPGAQHY True H1975_Epitope_Rep3 1105.48287312405 1105.48176993586 33.073 2 0.21296252797856535 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 117132 18661 TYSPALNKMF True PC9_epitope_Rep3 1170.5743309807401 1170.5732299358601 76.997 2 0.2129620829750281 0.00036105427849320016 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 95996 11300 SEAFSINFR True H1975_Epitope_Rep1 1069.51925863277 1069.5181699358602 48.442 2 0.21295610145076405 0.00036105427849320016 0.9438714419765777 ['CON__P34955'] 9911 11750 AYPHNLMTF True NCI_RA007_Epitope_Rep3 1092.50625142092 1092.5051499358601 53.329 2 0.2129411063116539 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 28939 6837 FTEPNRHFY True H1975_Epitope_Rep3 1209.5567067706497 1209.5550749037902 31.255 3 0.21293814368344988 0.00036105427849320016 0.9438714419765777 ['ENSG00000165355|ENST00000298097|FBXO33'] 37599 9986 GYSFTTTAER True PC9_epitope_Rep3 1131.51965255559 1131.5185499358602 43.366 2 0.21293642356793016 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 87752 19468 QVFPGLLERV True PC9_epitope_Rep4 1156.6604435631998 1156.65934993586 83.0 2 0.21293641305666536 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 131823 21099 VYAPPVGGFSF True PC9_epitope_Rep4 1139.56514619603 1139.56404993586 89.32 2 0.21293374005292273 0.00036105427849320016 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 2374 10989 AEQFRLEQI True H1975_Epitope_Rep3 1132.5876725457597 1132.58656993586 47.357 2 0.21292518110792744 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185104|Q9UNN5-2|FAF1', 'ENSG00000185104|ENST00000396153|FAF1'] 54181 16139 KYPDIISRI True PC9_epitope_Rep5 1103.63389446219 1103.63278993586 67.067 2 0.2129163735318561 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 88461 14678 QYVSAFSKL True PC9_epitope_Rep4 1041.54949613189 1041.54838993586 64.395 2 0.2129051224527342 0.00036105427849320016 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 47576 11809 IYNGDMEKI True PC9_epitope_Rep1 1081.51139637101 1081.51028993586 50.291 2 0.21290407870578912 0.00036105427849320016 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 2297 7433 AEPVEVVAPR True NCI_RA007_Epitope_Rep2 1065.5818588893299 1065.5807699358602 33.539 2 0.21290383380407815 0.00036105427849320016 0.9438714419765777 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000413631.1_1_13:111590511-111591024:+|nuORF'] 38003 6670 HEIDRYTAIA True H1975_Epitope_Rep2 1187.59348620219 1187.5923899358602 30.565 2 0.21290043546847015 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32916643-32917850:-|nuORF'] 59730 4841 LGVIEDHSNR True NCI_RA007_Epitope_Rep2 1138.5730851107799 1138.57144490379 23.453 3 0.21289735796872808 0.00036105427849320016 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 100280 19486 SLLSHVEQL True PC9_epitope_Rep5 1024.55530978832 1024.5542099358602 80.006 2 0.2128960197371853 0.00036105427849320016 0.9438714419765777 ['ENSG00000116670|ENST00000376692|MAD2L2', 'ENST00000376664.10_1_1:11735929-11741152:-|nuORF'] 105398 20273 SVADYFKQI True PC9_epitope_Rep1 1069.54441075145 1069.5433099358602 82.807 2 0.21288344410771837 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 8244 23344 ATIIQLFQV True PC9_epitope_Rep3 1031.6015317047497 1031.6004299358601 95.072 2 0.21287884915570382 0.00036105427849320016 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 53778 19328 KYFGGVLEY True PC9_epitope_Rep1 1074.53859709502 1074.53750993586 79.151 2 0.21287683935824653 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 100151 22725 SLLDRFLATV True PC9_epitope_Rep2 1133.6444591458899 1133.6433699358602 92.909 2 0.21287614223770804 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 104248 9545 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4608749679298 41.723 1 0.21287439401980585 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 114359 13051 TSDELQFGY True H1975_Epitope_Rep3 1058.4556553167 1058.45454993586 55.44 2 0.21284366579034028 0.00036105427849320016 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 94363 16376 RYALQMEQL True PC9_epitope_Rep2 1150.5804789903398 1150.57938993586 68.235 2 0.21284036952650887 0.00036105427849320016 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 86728 9878 QRLAEPSQL True PC9_epitope_Rep1 1040.56145779792 1040.56036993586 42.853 2 0.21283962219092062 0.00036105427849320016 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 94776 20756 RYLPTGSFPF True PC9_epitope_Rep1 1183.6025943339098 1183.6014899358602 84.665 2 0.21283252313572154 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 67131 6970 LTDDKLSQY True H1975_Epitope_Rep2 1081.52915461013 1081.52804993586 31.731 2 0.2128310523215105 0.00036105427849320016 0.9438714419765777 ['ENSG00000121879|ENST00000263967|PIK3CA'] 2336 4640 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 22.947 2 0.2128303587718696 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 102511 8547 SPYSGPKFNSA True PC9_epitope_Rep4 1153.54038800017 1153.53928993586 40.355 2 0.2128285548774808 0.00036105427849320016 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 69854 19949 LYANMFERL True PC9_epitope_Rep2 1155.57466533391 1155.5735699358602 82.133 2 0.2128257622612023 0.00036105427849320016 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 89029 7950 REEEMTVVEEA True H1975_Epitope_Rep2 1320.5867461392397 1320.5856499358601 35.529 2 0.2128171733372611 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1'] 35386 7002 GTDDGKVGLY True H1975_Epitope_Rep2 1023.48728979815 1023.4861899358599 31.856 2 0.21281526218971897 0.00036105427849320016 0.9438714419765777 ['ENSG00000082516|ENST00000285873|GEMIN5', 'GEMIN5|p.E1125Sfs*36|1|0.24|ENSG00000082516|chr5:154896316-154896316|C/-|frameshift_variant', 'GEMIN5|p.P480Hfs*63|1|0.14|ENSG00000082516|chr5:154921368-154921368|C/-|frameshift_variant'] 89715 11182 REYQDLLNV True NCI_RA007_Epitope_Rep3 1148.5825871653199 1148.5814899358602 51.093 2 0.21281479285114 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 95316 10419 SAFGVIIEK True NCI_RA007_Epitope_Rep4 962.54368247546 962.54258993586 46.93 2 0.2128120008020317 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 60173 12061 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 54.199 2 0.2128110869224422 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 106031 18330 SVLNVLHSL True PC9_epitope_Rep6 980.5654805492 980.56438993586 83.148 2 0.21281042155939345 0.00036105427849320016 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 112284 12272 TLYVGNLSR True PC9_epitope_Rep3 1021.5556441414899 1021.55454993586 52.231 2 0.21280623051141148 0.00036105427849320016 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000496452.5_1_2:70456348-70475673:-|nuORF', 'ENST00000481650.1_1_2:70456348-70475673:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1'] 92216 19605 RQIDQFLVV True PC9_epitope_Rep2 1116.62914343492 1116.6280499358602 80.795 2 0.21280537850196604 0.00036105427849320016 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 72389 7568 MTEGSTVNTEY True H1975_Epitope_Rep3 1230.50743318938 1230.50632993586 34.091 2 0.21280099172508055 0.00036105427849320016 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 133531 16454 WHHTFYNEL True PC9_epitope_Rep5 1245.55670677065 1245.5550749037902 68.288 3 0.21279586301012052 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 86944 14335 QRTDVLTGL True PC9_epitope_Rep5 1001.55055876105 1001.54946993586 60.141 2 0.21278962772575738 0.00036105427849320016 0.9438714419765777 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 94676 13189 RYLEKPMEI True PC9_epitope_Rep1 1177.6165301458898 1177.6154299358602 55.595 2 0.21278466322916756 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 138550 14348 YRNDYATML True PC9_epitope_Rep4 1145.51754438061 1145.51644993586 63.096 2 0.2127676233048602 0.00036105427849320016 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2', 'ENST00000460886.1_1_21:47532344-47532792:+|nuORF'] 26689 11947 FLDDGHTFNY True H1975_Epitope_Rep3 1227.51965255559 1227.5185499358602 51.11 2 0.212763414873192 0.00036105427849320016 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 24728 10775 FAYDGKDYL True NCI_RA007_Epitope_Rep3 1090.4971262058598 1090.4960299358602 49.426 2 0.2127575246569523 0.00036105427849320016 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 94417 16288 RYFENPQVI True PC9_epitope_Rep1 1164.5927579262 1164.5916699358602 67.47 2 0.2127492058902042 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 106967 17314 SYLEKQVVTF True PC9_epitope_Rep2 1212.6390394122798 1212.6379499358602 71.857 2 0.2127412013356319 0.00036105427849320016 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 2595 5146 AESIQDNAHMA True H1975_Epitope_Rep2 1185.5084362488901 1185.50732993586 24.872 2 0.2127409794065481 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32875160-32883832:+|nuORF'] 9693 20673 AYIDYLSHL True PC9_epitope_Rep2 1093.54441075145 1093.5433099358602 84.955 2 0.21272594093636468 0.00036105427849320016 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 74655 8609 NLGGGVVTIER True H1975_Epitope_Rep3 1113.61422164677 1113.6131299358601 38.106 2 0.2126994241261629 0.00036105427849320016 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 95036 9658 RYQTQPVTL True PC9_epitope_Rep4 1104.5927579261997 1104.5916699358602 44.774 2 0.21269810543195974 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 21789 6636 ESDINSVRY True H1975_Epitope_Rep3 1081.50400249145 1081.50290993586 30.48 2 0.21269714936131118 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000559541.1_1_15:52416976-52428016:-|nuORF'] 52595 15279 KPYNVYITV True PC9_epitope_Rep4 1095.59644632431 1095.5953499358602 66.699 2 0.21269378871981995 0.00036105427849320016 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 116767 15894 TYLEKFQNL True PC9_epitope_Rep6 1154.5971746002997 1154.5960699358602 73.416 2 0.21269339055315317 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 15243 5103 EAGEQGDIEPR True PC9_epitope_Rep5 1199.5418445521498 1199.54074993586 24.655 2 0.21268743981294425 0.00036105427849320016 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 26025 20143 FHDGFLLEV True PC9_epitope_Rep4 1075.53384606775 1075.53274993586 85.615 2 0.2126859615270543 0.00036105427849320016 0.9438714419765777 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'ENST00000586887.1_1_18:12698966-12699161:-|nuORF', 'ENST00000593250.5_1_18:12691430-12699161:-|nuORF'] 30183 17786 FYTVIPHNF True PC9_epitope_Rep6 1136.5654805492 1136.5643899358602 81.048 2 0.21268221207278235 0.00036105427849320016 0.9438714419765777 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 29671 20572 FVNDIFERI True PC9_epitope_Rep2 1151.59750895347 1151.59640993586 84.562 2 0.21268000030952355 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 138524 14893 YRLLPGPSA True PC9_epitope_Rep1 972.5392658013599 972.53816993586 62.106 2 0.21267549128151436 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 28098 13574 FREDQIYRI True PC9_epitope_Rep2 1238.64077074778 1238.6391149037902 57.505 3 0.21267498948615707 0.00036105427849320016 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 86021 14860 QPITPGPSI True PC9_epitope_Rep5 908.4967322830399 908.49562993586 62.162 2 0.21266981505679122 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 113778 17159 TRDQFLDTL True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 71.259 2 0.21266805412840492 0.00036105427849320016 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 87884 19124 QVLPHLLEV True PC9_epitope_Rep4 1046.6124307416198 1046.61132993586 81.653 2 0.2126623788863412 0.00036105427849320016 0.9438714419765777 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 7131 10978 AQYEHDLEV True PC9_epitope_Rep2 1102.4931034545798 1102.49200993586 47.549 2 0.21265107790644525 0.00036105427849320016 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 70052 15363 LYGRNFNYL True PC9_epitope_Rep6 1158.5821932425 1158.58108993586 71.24 2 0.21265107415669487 0.00036105427849320016 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 116536 21730 TYEKFFGLL True PC9_epitope_Rep5 1116.5855472874398 1116.5844499358602 88.617 2 0.21265085816459975 0.00036105427849320016 0.9438714419765777 ['ENSG00000163510|ENST00000410053|CWC22'] 74288 20205 NIIPRFVQV True PC9_epitope_Rep1 1084.6393141958001 1084.63820993586 82.547 2 0.21263354048748834 0.00036105427849320016 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C'] 21588 5763 ERSGVNSEL True PC9_epitope_Rep5 989.47778774361 989.47668993586 27.16 2 0.212619708371494 0.00036105427849320016 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 123088 18274 VHAPPMQLGF True PC9_epitope_Rep2 1095.5535359665098 1095.5524299358601 75.612 2 0.21260812275096103 0.00036105427849320016 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 31233 12303 GDLPFVVPR True H1975_Epitope_Rep1 998.5549158654999 998.55380993586 52.35 2 0.21259414177908229 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 116871 14563 TYNPAFSRL True PC9_epitope_Rep5 1067.53999407735 1067.5388899358602 61.015 2 0.2125893643426159 0.00036105427849320016 0.9438714419765777 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 67504 16128 LTELPDWSY True H1975_Epitope_Rep1 1122.5233409537 1122.5222499358601 67.381 2 0.21258277769763087 0.00036105427849320016 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 132990 13608 VYVERAEVL True PC9_epitope_Rep3 1076.5866099165999 1076.58550993586 57.407 2 0.21258082217997443 0.00036105427849320016 0.9438714419765777 ['ENSG00000089234|ENST00000419234|BRAP'] 126682 17019 VPRPAVLDPAL True PC9_epitope_Rep2 1146.67609362734 1146.6749899358601 70.713 2 0.21257868675895167 0.00036105427849320016 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 87643 21251 QVADILFQTA True PC9_epitope_Rep2 1104.5815245361598 1104.5804299358601 87.203 2 0.21257044351759216 0.00036105427849320016 0.9438714419765777 ['ENSG00000114491|ENST00000232607|UMPS'] 93630 11058 RTDYGQVFTY True H1975_Epitope_Rep2 1248.5775017848798 1248.57640993586 47.565 2 0.2125701788317747 0.00036105427849320016 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 77230 13524 NYIGLINRI True NCI_RA007_Epitope_Rep1 1074.61857875122 1074.61748993586 56.613 2 0.21256689275634388 0.00036105427849320016 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 6836 16581 AQIDHYLGL True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 76.226 2 0.212566041636541 0.00036105427849320016 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 117906 9815 VAQLEQVYIR True NCI_RA007_Epitope_Rep5 1217.6768219033297 1217.67572993586 44.399 2 0.21256587273326633 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 89702 4761 REYNWNVKNKA True NCI_RA007_Epitope_Rep2 1420.7211463267997 1420.71949490379 23.148 3 0.2125638922608 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000006712|Q8N7H5-3|PAF1', 'nc|ENSG00000006712|Q8N7H5-2|PAF1', 'ENSG00000006712|ENST00000221265|PAF1'] 43306 10217 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 44.635 2 0.21256285442517245 0.00036105427849320016 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 73779 15554 NHDFQALAL True PC9_epitope_Rep6 1027.50869394907 1027.50758993586 72.029 2 0.2125544544656794 0.00036105427849320016 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 75886 20455 NRDQIIFMV True PC9_epitope_Rep5 1134.5855643707798 1134.5844699358602 83.717 2 0.2125393550463191 0.00036105427849320016 0.9438714419765777 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'ENST00000445336.2_1_X:74804463-74804925:+|nuORF', 'ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 109842 11874 THLLNQDTL True PC9_epitope_Rep2 1053.54547338061 1053.54436993586 50.998 2 0.2125352507646168 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 8171 9241 ATGDMSGLLK True NCI_RA007_Epitope_Rep2 991.5008316873099 991.49972993586 40.556 2 0.21253153436406388 0.00036105427849320016 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 104992 8885 STIEYVIQR True NCI_RA007_Epitope_Rep5 1107.59242357303 1107.5913299358601 40.839 2 0.21252984110406686 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 131957 18008 VYFVAPAKF True PC9_epitope_Rep4 1040.5695033004797 1040.56840993586 77.326 2 0.21252924541006113 0.00036105427849320016 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 135526 9123 YEEDSYSHIMA True H1975_Epitope_Rep1 1343.53398229039 1343.53288993586 39.995 2 0.21251803699287905 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 24495 19637 FAIPLIEKL True PC9_epitope_Rep6 1042.64266824074 1042.6415699358602 88.193 2 0.21251603016877316 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 106976 17865 SYLENVDHF True PC9_epitope_Rep1 1122.49818883502 1122.49708993586 73.51 2 0.21251570690186283 0.00036105427849320016 0.9438714419765777 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-5|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF'] 24330 9731 FADLSEAANR True PC9_epitope_Rep2 1092.5199869087598 1092.5188899358602 42.772 2 0.21250831031911338 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 48664 3305 KELEKTYSA True NCI_RA007_Epitope_Rep4 1067.54989005471 1067.5487899358602 18.438 2 0.21250158908246491 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 41582 9152 IDEPLEGSEDR True PC9_epitope_Rep1 1258.56772494682 1258.5666299358602 40.054 2 0.21249917138591454 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 107314 13448 SYREDPIVY True PC9_epitope_Rep3 1140.5451390274397 1140.5440499358601 56.773 2 0.21249729339456244 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 124275 10466 VLDEADLSRY True H1975_Epitope_Rep1 1179.57716743171 1179.57606993586 45.212 2 0.21249497831849956 0.00036105427849320016 0.9438714419765777 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1'] 18780 10837 ELDRFMHYY True H1975_Epitope_Rep3 1272.55974354576 1272.55864993586 46.765 2 0.21249427371229948 0.00036105427849320016 0.9438714419765777 ['ENSG00000001629|ENST00000265742|ANKIB1', 'ENST00000422095.1_3_7:92000906-92025787:+|nuORF'] 30982 7174 GATEITTTITK True NCI_RA007_Epitope_Rep2 1134.61321858726 1134.6121299358601 32.526 2 0.21249268627706558 0.00036105427849320016 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000024146'] 89843 21216 RFLDDLGLKF True PC9_epitope_Rep5 1222.6710082468996 1222.66990993586 86.655 2 0.2124835023064717 0.00036105427849320016 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 105405 20215 SVADYFKQI True PC9_epitope_Rep5 1069.54441075145 1069.54387496793 82.803 1 0.21247911571292438 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 60952 4566 LLADQAEAR True NCI_RA007_Epitope_Rep5 985.51925863277 985.51816993586 24.223 2 0.2124783570366402 0.00036105427849320016 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000424919.1_1_X:150162237-150162561:+|nuORF'] 86616 9898 QRDQQLEAL True PC9_epitope_Rep5 1099.5621860739097 1099.56108993586 43.043 2 0.2124740226342911 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000090615|Q08378-2|GOLGA3', 'nc|ENSG00000090615|Q08378-4|GOLGA3', 'ENSG00000090615|ENST00000450791|GOLGA3'] 101129 12724 [Acetylation]-SLVIPEKFQH True NCI_RA007_Epitope_Rep1 1238.66592318276 1238.66482993586 53.478 2 0.21247251628937738 0.00036105427849320016 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 87394 11149 QTDPVTLQY True H1975_Epitope_Rep1 1063.51858992643 1063.51748993586 47.852 2 0.2124706616815038 0.00036105427849320016 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 70952 6740 MENEMAHYA True H1975_Epitope_Rep2 1094.41611608718 1094.41500993586 30.84 2 0.21246247307000335 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 131799 11134 VYANGIRNI True PC9_epitope_Rep3 1018.5559784946599 1018.55488993586 47.827 2 0.21244791015446846 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 105769 7135 SVIDTSTIVRK True NCI_RA007_Epitope_Rep4 1217.69795127073 1217.6968499358602 34.063 2 0.21243447294295645 0.00036105427849320016 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 32077 10349 GEWPDQPRI True NCI_RA007_Epitope_Rep5 1096.53015766964 1096.5290699358602 46.437 2 0.2124334469477687 0.00036105427849320016 0.9438714419765777 ['ENSG00000187257|ENST00000334955|RSBN1L', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L'] 22194 13738 ETDEKDFYLYY True H1975_Epitope_Rep1 1484.6347418774799 1484.6336499358601 57.983 2 0.21242791399339606 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 14561 7387 DVEEGDEKFE True NCI_RA007_Epitope_Rep1 1195.4880776437897 1195.48698993586 32.727 2 0.212421543651983 0.00036105427849320016 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS'] 140396 17368 YYEYNHDLF True PC9_epitope_Rep4 1262.5244035828598 1262.5233099358602 74.81 2 0.21240333178936485 0.00036105427849320016 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 94748 18084 RYLNEFEEL True PC9_epitope_Rep4 1211.5822528121498 1211.5811499358601 77.623 2 0.21238360145341378 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 254 11983 AAGGVGSIVRV True PC9_epitope_Rep4 984.5716285588 984.57052993586 53.886 2 0.21235033799524164 0.00036105427849320016 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 67092 4923 LTDADAM[Oxidation]KY True H1975_Epitope_Rep3 1042.46411220586 1042.46300993586 24.062 2 0.21234954441431794 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A'] 102515 13901 SQADAFFKA True PC9_epitope_Rep3 983.47124581119 983.47014993586 58.552 2 0.21233977665147907 0.00036105427849320016 0.9438714419765777 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L'] 105361 20639 STYKFFEVI True PC9_epitope_Rep2 1132.580461907 1132.57936993586 84.822 2 0.21233254420321584 0.00036105427849320016 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 14280 5797 DSYVGDEAQTK True NCI_RA007_Epitope_Rep1 1211.5306111621096 1211.52950993586 26.602 2 0.21232857427044374 0.00036105427849320016 0.9438714419765777 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 26230 15682 FHYEADGANVL True PC9_epitope_Rep2 1234.5618517207397 1234.56074993586 65.597 2 0.212315211879725 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 38099 8999 HENPDIIIA True H1975_Epitope_Rep2 1020.52400966004 1020.52290993586 39.566 2 0.21230014613045303 0.00036105427849320016 0.9438714419765777 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENST00000546869.1_1_12:113614643-113615134:-|nuORF'] 133047 9887 VYVVGTAHF True NCI_RA007_Epitope_Rep3 991.5127167003499 991.51160993586 45.968 2 0.21229948654696137 0.00036105427849320016 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 76895 6177 NVKVDPEIQ True NCI_RA007_Epitope_Rep5 1040.5502244078798 1040.54912993586 30.439 2 0.21229434409403497 0.00036105427849320016 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.L163P|1|0.23|ENSG00000172867|chr12:52651655-52651655|A/G|missense_variant'] 69492 11411 LVSESSDVLPK True PC9_epitope_Rep3 1172.6288686514001 1172.6277699358602 48.894 2 0.21229209982234382 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 135193 16843 YAVEGRDLTL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 69.611 2 0.21228743851334225 0.00036105427849320016 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 48587 5555 KEIEELQSQA True NCI_RA007_Epitope_Rep3 1173.58773211541 1173.5866299358602 28.844 2 0.2122764475350665 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 94993 13842 RYQDIIHSI True PC9_epitope_Rep2 1143.6036569630699 1143.60254993586 58.526 2 0.2122680849507862 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 54176 15157 KYPDIISRI True PC9_epitope_Rep2 1103.63389446219 1103.63278993586 63.56 2 0.21226351629208573 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 92290 10788 RQLETLGQEKL True PC9_epitope_Rep1 1313.7303140281695 1313.72866490379 46.384 3 0.2122533264143304 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 75934 12759 NRESYEVSL True PC9_epitope_Rep3 1095.51965255559 1095.5185499358602 54.097 2 0.2122513376782163 0.00036105427849320016 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000502972.1_1_4:48859213-48862776:+|nuORF'] 22342 4748 ETEKMIEKY True H1975_Epitope_Rep3 1169.5638258666897 1169.56219490379 23.389 3 0.2122503057788422 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 9841 18197 AYLLNLNHL True PC9_epitope_Rep6 1069.59202965021 1069.59092993586 82.635 2 0.21224285045324723 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 127067 18444 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 75.966 2 0.21224215528174636 0.00036105427849320016 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 72114 12709 MRDPTFVRL True PC9_epitope_Rep4 1133.60154878809 1133.59990490379 56.74 3 0.21223819115449383 0.00036105427849320016 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 75733 6770 NQWDGTQHGV True PC9_epitope_Rep6 1140.49483479008 1140.49372993586 34.858 2 0.21223603062818888 0.00036105427849320016 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 45479 7717 ISENKFLKY True H1975_Epitope_Rep2 1140.6179100448799 1140.61627490379 34.635 3 0.21223233954200602 0.00036105427849320016 0.9438714419765777 ['ENST00000488290.5_1_10:30602540-30654262:-|nuORF', 'nc|ENSG00000107951|Q9NVV4-2|MTPAP', 'ENSG00000107951|ENST00000263063|MTPAP'] 140840 19957 YYTDIMHTL True PC9_epitope_Rep5 1155.5270464351497 1155.5259499358601 81.817 2 0.21222982368520593 0.00036105427849320016 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 136341 13070 YHAQMPDSL True PC9_epitope_Rep5 1060.46478053176 1060.4636899358602 55.281 2 0.2122209907124238 0.00036105427849320016 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 63785 12662 LPSITTEILK True H1975_Epitope_Rep3 1113.66452588413 1113.6634299358602 53.913 2 0.21221645188875848 0.00036105427849320016 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 68828 7975 LVDTAGQDEY True H1975_Epitope_Rep3 1109.48768372097 1109.4865899358601 35.648 2 0.21221621030900564 0.00036105427849320016 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 65057 15198 LSDLFSDDY True H1975_Epitope_Rep2 1073.45532096353 1073.45477496793 63.615 1 0.21221437622337455 0.00036105427849320016 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 37591 7096 GYSFTTTAER True NCI_RA007_Epitope_Rep5 1131.51965255559 1131.5185499358602 33.975 2 0.2122123076041132 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 29673 20880 FVNDIFERI True PC9_epitope_Rep3 1151.59750895347 1151.59640993586 85.589 2 0.2122085894702773 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 109411 19361 TGPTRFFLF True PC9_epitope_Rep6 1084.5705659296398 1084.56946993586 87.121 2 0.21220470175613668 0.00036105427849320016 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 24098 17281 EYRPEFSNF True PC9_epitope_Rep5 1187.5247379360299 1187.52364993586 71.479 2 0.2122013433849065 0.00036105427849320016 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 77557 12812 NYSNIRFQF True NCI_RA007_Epitope_Rep4 1187.57235683479 1187.5712499358601 56.36 2 0.2121981000844284 0.00036105427849320016 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 1023 5526 AEAESM[Oxidation]YQIK True NCI_RA007_Epitope_Rep2 1184.53833977528 1184.53724993586 26.11 2 0.21219567159536754 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 74714 20089 NLLAHFINA True PC9_epitope_Rep2 1011.55016483823 1011.54906993586 82.68 2 0.21219245699680167 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 136619 5482 YIDENQDRY True H1975_Epitope_Rep2 1214.52038083158 1214.5192899358601 26.101 2 0.2121831003345712 0.00036105427849320016 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2', 'CNDP2|p.W309Cfs*23|1|0.3|ENSG00000133313|chr18:74516250-74516250|G/-|frameshift_variant', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 57674 9236 LEMLTGQERVA True H1975_Epitope_Rep3 1245.6387221424502 1245.63762993586 40.517 2 0.21218063982713162 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 4378 6377 AIQNPTMINK True NCI_RA007_Epitope_Rep4 1128.59612905448 1128.59502993586 31.133 2 0.212174961725981 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 78913 17657 PFAKPLPTF True PC9_epitope_Rep2 1016.5695033004799 1016.56840993586 73.199 2 0.21217318571622482 0.00036105427849320016 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 14049 8727 DSDFRKDDFY True H1975_Epitope_Rep2 1306.5465955794198 1306.5454899358601 38.529 2 0.2121709899183621 0.00036105427849320016 0.9438714419765777 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 137388 21783 YLLDLHSYL True PC9_epitope_Rep5 1135.59136094387 1135.59026993586 88.82 2 0.21216007637104195 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'MARCHF6|p.A560T|1|0.21|ENSG00000145495|chr5:10410263-10410263|G/A|missense_variant'] 52819 18369 KQVEEIFNL True PC9_epitope_Rep4 1118.5971746003 1118.5960699358602 78.722 2 0.21215662782936578 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 46903 17624 IVIRGLNTI True PC9_epitope_Rep5 997.62841515893 997.62730993586 72.802 2 0.21215444054524446 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 8027 10143 ATDRWYDEY True H1975_Epitope_Rep1 1217.49891711101 1217.4978299358602 43.953 2 0.21213590112134836 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 17700 18239 EHSLPTLGL True PC9_epitope_Rep5 965.51819600361 965.51708993586 75.17 2 0.2121292101295889 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 76192 15048 NRTFSYTL True PC9_epitope_Rep3 1000.4977949122 1000.49668993586 63.013 2 0.212127454315122 0.00036105427849320016 0.9438714419765777 ['KEAP1|p.N469Kfs*11|1|0.54|ENSG00000079999|chr19:10489772-10489773|-/T|frameshift_variant', 'KEAP1|p.R596Efs*2|1|0.17|ENSG00000079999|chr19:10486741-10486741|G/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.C319Afs*9|1|0.35|ENSG00000079999|chr19:10491948-10491948|G/-|frameshift_variant', 'KEAP1|p.H59R|1|0.44|ENSG00000079999|chr19:10499858-10499858|T/C|missense_variant'] 22340 4878 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56219490379 23.849 3 0.21212619093980703 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 9764 17021 AYLEAIHNF True PC9_epitope_Rep4 1076.52909504048 1076.5279899358602 73.464 2 0.21212027940322986 0.00036105427849320016 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 20672 10289 EQIEAGTPGRL True PC9_epitope_Rep5 1169.6040508858898 1169.6029499358601 44.564 2 0.21211558202728506 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 44697 17884 IPNPAQTSVVV True PC9_epitope_Rep5 1123.62372370131 1123.62262993586 73.808 2 0.21211526837125871 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 107156 16650 SYNEHWNYL True PC9_epitope_Rep2 1224.5199869087598 1224.5188899358602 69.288 2 0.21210373167801908 0.00036105427849320016 0.9438714419765777 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 138297 18668 YQYPVIIHL True PC9_epitope_Rep6 1144.6280808057597 1144.6269899358601 84.451 2 0.21210213980524398 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 29284 10203 FVDKNNDLLY True H1975_Epitope_Rep3 1239.61355294043 1239.61244993586 44.291 2 0.21209109332312712 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 88011 6878 QVSPEAGVQKV True PC9_epitope_Rep2 1140.6138872935999 1140.61278993586 31.857 2 0.2120807780514095 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 38125 10732 HEQFIPIAA True H1975_Epitope_Rep1 1024.5341804209197 1024.53308993586 46.243 2 0.21207475386345379 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 9928 21318 AYPPAPFMHIL True PC9_epitope_Rep5 1255.64235097091 1255.64124993586 87.054 2 0.21206775720874252 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 114374 6783 TSDHFETIM[Oxidation]KY True H1975_Epitope_Rep2 1386.6125673447 1386.6114699358602 31.007 2 0.21205927585377365 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 137408 20498 YLLPAIVHI True PC9_epitope_Rep4 1037.62735252977 1037.62677496793 86.996 1 0.2120581732095649 0.00036105427849320016 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 135598 12333 YEELQSLAGK True PC9_epitope_Rep3 1136.5713537752797 1136.5702499358601 52.466 2 0.21205061004949832 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 119253 10291 VELDNM[Oxidation]PLR True PC9_epitope_Rep5 1101.54884488933 1101.54774993586 44.571 2 0.21204860684914953 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 49349 19453 KIFDEILVNA True PC9_epitope_Rep4 1160.64412479272 1160.64302993586 82.941 2 0.21203844396568924 0.00036105427849320016 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 117052 12726 TYQQVQQTL True PC9_epitope_Rep5 1107.55603806431 1107.5549499358601 53.958 2 0.21203639147759903 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 94602 18827 RYKLYQEMF True PC9_epitope_Rep3 1276.6274291827597 1276.6263299358602 77.642 2 0.2120341268517425 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 17772 22063 EHVFWVVSL True PC9_epitope_Rep5 1114.5811306133398 1114.58002993586 89.893 2 0.21202916704153102 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 104337 6062 SSETEVALAR True NCI_RA007_Epitope_Rep1 1061.5353026197297 1061.5342099358602 27.619 2 0.2120171685679693 0.00036105427849320016 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 52085 20381 KLLPQLTYL True PC9_epitope_Rep2 1087.66413196131 1087.66302993586 83.819 2 0.2120169830456938 0.00036105427849320016 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000486769.1_1_9:100760930-100767440:+|nuORF', 'nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B'] 138988 8221 YSEYPPFSHRY True H1975_Epitope_Rep3 1444.6411646706 1444.63951490379 36.605 3 0.21201627409072785 0.00036105427849320016 0.9438714419765777 ['ENSG00000133872|ENST00000256255|SARAF', 'nc|ENSG00000133872|Q96BY9-2|SARAF'] 101787 11765 SPIENIQRV True PC9_epitope_Rep3 1054.57710786206 1054.5760099358602 50.273 2 0.21201475312576432 0.00036105427849320016 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 61942 18243 LLLNNDNLLR True PC9_epitope_Rep2 1196.6877209401998 1196.68662993586 75.491 2 0.21201245611729094 0.00036105427849320016 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 113889 13010 TRHPFLTAL True PC9_epitope_Rep2 1054.59236400338 1054.59126993586 55.327 2 0.2120120628000302 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 75811 19004 NRDELELEL True PC9_epitope_Rep1 1129.5615173675699 1129.5604299358602 77.887 2 0.21199515572561495 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 137649 19084 YLYDLNHTL True PC9_epitope_Rep2 1150.5658744720201 1150.56476993586 78.771 2 0.21199508686029905 0.00036105427849320016 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1'] 23165 8503 EVPAVPETLK True NCI_RA007_Epitope_Rep5 1081.60192562757 1081.60082993586 39.389 2 0.21199397432506228 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7'] 140884 19400 YYTTPIYRF True PC9_epitope_Rep3 1222.60225998074 1222.60116993586 79.845 2 0.21198082402647742 0.00036105427849320016 0.9438714419765777 ['ENSG00000104957|ENST00000221554|YJU2B'] 132481 8355 VYPDGIRHI True PC9_epitope_Rep4 1068.5716285587998 1068.5705299358601 39.595 2 0.2119739559667076 0.00036105427849320016 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 140645 20497 YYPEHFTLL True PC9_epitope_Rep1 1181.57571087973 1181.57460993586 83.654 2 0.21196833404980564 0.00036105427849320016 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10'] 123621 15217 VILEGELERA True PC9_epitope_Rep1 1127.6186383208699 1127.61754993586 63.353 2 0.2119668923106669 0.00036105427849320016 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 88357 17614 QYMERLQLL True PC9_epitope_Rep6 1192.62742918276 1192.6263299358602 80.393 2 0.21195782996980386 0.00036105427849320016 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 72112 15181 MRDPTFVRL True PC9_epitope_Rep3 1133.60154878809 1133.59990490379 63.538 3 0.2119549558970577 0.00036105427849320016 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 124363 16416 VLDSVDVRL True PC9_epitope_Rep4 1014.57095985246 1014.56986993586 71.107 2 0.21194732403147806 0.00036105427849320016 0.9438714419765777 ['ENSG00000169105|ENST00000306243|CHST14'] 5078 18621 ALLPHLYTL True PC9_epitope_Rep6 1039.60661708519 1039.6055299358602 84.269 2 0.2119456951724872 0.00036105427849320016 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 46191 7516 ITDHLDTQY True H1975_Epitope_Rep3 1104.5087535187201 1104.5076499358602 33.89 2 0.21194052539259212 0.00036105427849320016 0.9438714419765777 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 136355 6328 YHDEADQSAL True PC9_epitope_Rep2 1147.47818166643 1147.47708993586 29.739 2 0.21193964910401156 0.00036105427849320016 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 123506 10371 VIHDNFGIVEG True H1975_Epitope_Rep3 1198.59823722946 1198.5971499358602 44.946 2 0.21193336312076513 0.00036105427849320016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 138680 17453 YRTDMIQAL True PC9_epitope_Rep3 1109.55392988933 1109.55282993586 72.308 2 0.21192291071986583 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 7987 5779 ATDMPVKNQY True H1975_Epitope_Rep3 1165.54375912845 1165.5426699358602 27.254 2 0.2119176638711633 0.00036105427849320016 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 140871 16876 YYTPITPHL True PC9_epitope_Rep4 1103.56514619603 1103.56404993586 72.894 2 0.21191663520426632 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 22976 17191 EVIKELAQI True PC9_epitope_Rep2 1041.6070110080097 1041.6059099358602 71.384 2 0.2119155061035573 0.00036105427849320016 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 24204 15649 EYVEKFYRI True PC9_epitope_Rep3 1245.6393737654498 1245.63772490379 65.34 3 0.21191233246236021 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 139373 5337 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 25.581 2 0.2119057793903232 0.00036105427849320016 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 1904 7860 AEILNGKEISA True H1975_Epitope_Rep3 1143.61355294043 1143.61244993586 35.209 2 0.2118919702533957 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 43742 19852 IITKDLFQV True PC9_epitope_Rep1 1075.62774645259 1075.62664993586 81.177 2 0.211890206323624 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 9845 18460 AYLPEWKENI True PC9_epitope_Rep4 1261.6342883850098 1261.6331899358602 79.076 2 0.21187836183555234 0.00036105427849320016 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 72110 13365 MRDPTFVRL True PC9_epitope_Rep2 1133.60154878809 1133.59990490379 56.684 3 0.21187357327661682 0.00036105427849320016 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 125738 20553 VNFEFPEFQL True H1975_Epitope_Rep1 1268.6077392839998 1268.60664993586 85.469 2 0.21187280406264347 0.00036105427849320016 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 35422 13192 GTDLSIFKY True H1975_Epitope_Rep2 1042.53351171458 1042.5324099358602 55.868 2 0.21186883782987545 0.00036105427849320016 0.9438714419765777 ['ENSG00000004766|ENST00000305866|VPS50', 'VPS50|p.S583Vfs*7|1|0.23|ENSG00000004766|chr7:93308938-93308938|A/-|frameshift_variant', 'VPS50|p.K778Nfs*7|1|0.13|ENSG00000004766|chr7:93349900-93349900|G/-|frameshift_variant', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 25948 4652 FGSDQSENVDR True NCI_RA007_Epitope_Rep2 1252.53200814444 1252.53090993586 22.722 2 0.21186408145342367 0.00036105427849320016 0.9438714419765777 ['ENSG00000130770|ENST00000335514|ATP5IF1', 'nc|ENSG00000130770|Q9UII2-3|ATP5IF1', 'nc|ENSG00000130770|Q9UII2-2|ATP5IF1'] 87408 12924 QTDQMVFNAY True H1975_Epitope_Rep3 1215.52302368387 1215.52192993586 54.94 2 0.21186141927679988 0.00036105427849320016 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 110500 15702 TIQEEFYRV True PC9_epitope_Rep4 1183.5873381925899 1183.58624993586 68.323 2 0.211859715089261 0.00036105427849320016 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 96429 8018 SEIESVKISA True H1975_Epitope_Rep1 1061.56045473841 1061.5593499358602 35.785 2 0.21185844044786495 0.00036105427849320016 0.9438714419765777 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU'] 108449 10147 TEELAYLK True PC9_epitope_Rep6 965.50696261357 965.50586993586 49.652 2 0.2118524477748432 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 88366 6366 QYNPHVHQL True PC9_epitope_Rep1 1134.55704112382 1134.55540490379 29.296 3 0.2118344094091211 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 37921 5766 HEDVRLYTA True H1975_Epitope_Rep2 1102.54072235334 1102.5396299358601 27.173 2 0.21183333860857245 0.00036105427849320016 0.9438714419765777 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENST00000590533.1_1_19:2807573-2808419:+|nuORF', 'ENST00000591149.5_1_19:2807001-2808381:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 28999 20915 FTIFRTISV True PC9_epitope_Rep5 1082.6124307416198 1082.61132993586 85.504 2 0.21183031785682513 0.00036105427849320016 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 103066 18161 SQLELGVHL True PC9_epitope_Rep2 994.54474510462 994.54364993586 75.16 2 0.2118240477214815 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 123565 17478 VIIKGLEEI True PC9_epitope_Rep4 1012.6168474157199 1012.61574993586 75.228 2 0.21181741001188656 0.00036105427849320016 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 92111 9515 RPYQPLPEA True PC9_epitope_Rep2 1069.55564414149 1069.5545499358602 41.947 2 0.21180278085377854 0.00036105427849320016 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 113547 18759 TQVTALIKL True PC9_epitope_Rep2 985.61718176889 985.61608993586 77.531 2 0.21180163009673306 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 35353 4405 GTADVHFER True NCI_RA007_Epitope_Rep4 1030.48320747722 1030.48210993586 23.3 2 0.2117977059448255 0.00036105427849320016 0.9438714419765777 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 39118 9985 HLDGQPFLRY True H1975_Epitope_Rep2 1244.63020606408 1244.62910993586 43.397 2 0.21179436379602087 0.00036105427849320016 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'ENSG00000204520|ENST00000449934|MICA'] 22267 3457 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 18.176 2 0.21179079954348343 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 54390 10375 KYQKGFSLW True NCI_RA007_Epitope_Rep5 1155.6076797143498 1155.60604490379 46.536 3 0.21179059721490476 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 53993 12111 KYLDNPNAL True PC9_epitope_Rep3 1046.53965972418 1046.53856993586 51.629 2 0.21178651121212802 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 136913 12458 YKDGTELEL True PC9_epitope_Rep4 1066.51825557326 1066.51714993586 55.726 2 0.21178175552663273 0.00036105427849320016 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 8866 12160 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6965849037902 54.59 3 0.2117798869429573 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 64471 11242 LQTSIREEI True PC9_epitope_Rep4 1087.5873381925899 1087.58624993586 51.017 2 0.21177713912436216 0.00036105427849320016 0.9438714419765777 ['PMF1|p.Q83H|1|0.2|ENSG00000160783|chr1:156232407-156232407|G/T|missense_variant', 'nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 94885 19929 RYPAIIYNI True PC9_epitope_Rep5 1121.62332977849 1121.62222993586 81.712 2 0.2117735771666464 0.00036105427849320016 0.9438714419765777 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000507477.1_1_17:47780142-47780651:-|nuORF', 'ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1', 'SPOP-SLC35B1|1|fusion'] 12027 13706 DIDEVSSLLR True H1975_Epitope_Rep3 1145.59281749585 1145.59172993586 58.016 2 0.2117719425918661 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 89643 8716 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 38.487 3 0.21176511767374193 0.00036105427849320016 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 103270 9638 SQTFVNPHV True PC9_epitope_Rep4 1027.5086939490698 1027.50758993586 44.697 2 0.21176357597564202 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000602029.1_1_19:50519188-50519419:-|nuORF'] 138260 11593 YQVDSRTYL True PC9_epitope_Rep6 1143.5560380643099 1143.5549499358601 55.708 2 0.21174569903918147 0.00036105427849320016 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000513152.1_1_5:40764586-40764871:-|nuORF'] 128409 8093 VSDYLRQSY True H1975_Epitope_Rep3 1129.54038800017 1129.53928993586 36.104 2 0.21173919326601215 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant', 'ARID2|p.G803Afs*19|1|0.12|ENSG00000189079|chr12:45850530-45850530|G/-|frameshift_variant'] 87889 10761 QVLSEVSRV True PC9_epitope_Rep2 1015.56620882519 1015.56510993586 46.711 2 0.2117381948020948 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000284753|P0DPD7|EEF1AKMT4'] 73784 19322 NHDFTPLEI True PC9_epitope_Rep5 1084.5189242796 1084.5178299358602 79.366 2 0.21173556438481966 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 136125 11970 YGFQNALIVR True H1975_Epitope_Rep3 1179.6400424717897 1179.6389499358602 51.201 2 0.2117315733706979 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 107748 13584 TALVELVK True PC9_epitope_Rep2 871.5378688190299 871.53676993586 57.542 2 0.2117156292412634 0.00036105427849320016 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 47627 19517 IYPEVVHMF True PC9_epitope_Rep4 1133.5579526406098 1133.55684993586 83.191 2 0.2117146663536929 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 22279 4512 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 22.475 2 0.2117020103788044 0.00036105427849320016 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 107317 13187 SYREDPIVY True PC9_epitope_Rep5 1140.5451390274397 1140.5440499358601 55.728 2 0.21169498945186413 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 29814 20666 FVVDEVHLI True PC9_epitope_Rep3 1069.5807962601698 1069.5796899358602 84.765 2 0.21168488984339703 0.00036105427849320016 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 109884 12910 THNIIVNQL True PC9_epitope_Rep2 1050.5821932425 1050.58108993586 54.955 2 0.21168129697627278 0.00036105427849320016 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 89397 4965 REMPVKVEA True H1975_Epitope_Rep2 1057.5590152697698 1057.5579099358602 24.181 2 0.2116698385989882 0.00036105427849320016 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 138383 12598 YRDNDSDLAL True PC9_epitope_Rep1 1180.53603089572 1180.5349299358602 53.327 2 0.21166743090195778 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2'] 9247 6949 AVQQPFINK True NCI_RA007_Epitope_Rep2 1043.5763795860698 1043.5752899358602 31.649 2 0.21166118016103777 0.00036105427849320016 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 139060 16225 YSLDHISSL True PC9_epitope_Rep4 1033.5080252427301 1033.5069299358602 70.352 2 0.21165245241086697 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 104185 5175 SSDDIKETGY True H1975_Epitope_Rep2 1113.4825983405299 1113.48150993586 24.981 2 0.21165115049877475 0.00036105427849320016 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000575116.1_1_17:1555319-1557183:-|nuORF', 'ENST00000576585.1_1_17:1556769-1557303:-|nuORF', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 28964 7739 FTETSKLQY True H1975_Epitope_Rep2 1115.54989005471 1115.5487899358602 34.72 2 0.21164751384927014 0.00036105427849320016 0.9438714419765777 ['ENSG00000100490|ENST00000395834|CDKL1'] 115692 16754 TVLEEIGNRV True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 69.692 2 0.21164033861863826 0.00036105427849320016 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 132371 16442 VYMELSQKL True PC9_epitope_Rep1 1109.57908200801 1109.5779899358602 68.069 2 0.21163622234129076 0.00036105427849320016 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 115155 20918 TVADVVLWSV True PC9_epitope_Rep6 1087.59136094387 1087.59026993586 93.236 2 0.21163270277396704 0.00036105427849320016 0.9438714419765777 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 107043 21684 SYLPISPTF True PC9_epitope_Rep2 1023.52769805815 1023.5266099358599 88.884 2 0.21162332324482677 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 64115 5000 LQEEM[Oxidation]LQR True NCI_RA007_Epitope_Rep2 1061.51754476105 1061.51644993586 24.072 2 0.21162005789104998 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'VIM|p.E187G|1|0.33|ENSG00000026025|chr10:17229982-17229982|A/G|missense_variant'] 38710 11487 HHSNIPMSL True PC9_epitope_Rep5 1034.49674936638 1034.49564993586 49.182 2 0.21161629487647876 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant', 'ENST00000463046.5_1_2:61417336-61434009:-|nuORF'] 31815 5313 GEMMVEQRAA True NCI_RA007_Epitope_Rep3 1120.50051441748 1120.49940993586 27.909 2 0.21161264332873642 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'ENST00000569319.5_1_16:70399881-70405886:+|nuORF', 'ENST00000569771.5_1_16:70395504-70405886:+|nuORF', 'nc|ENSG00000260537|Q9UMR2-3|DDX19B', 'nc|ENSG00000168872|Q9NUU7-2|DDX19A', 'ENST00000562140.2_1_16:70398455-70404584:+|nuORF'] 116711 21652 TYKNFFYLI True PC9_epitope_Rep2 1207.62774645259 1207.62664993586 88.76 2 0.2115997520231058 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 109981 13812 THSNTIVVSL True PC9_epitope_Rep2 1069.57677350889 1069.57566993586 58.411 2 0.21158699824157945 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 93888 19234 RVIDDSLVVGV True PC9_epitope_Rep1 1170.66083748602 1170.6597499358602 78.783 2 0.21158351701804312 0.00036105427849320016 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 135226 13031 YAYDGKDYL True PC9_epitope_Rep4 1106.4920408254197 1106.49094993586 58.017 2 0.21158031493931537 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 71339 16800 MHNEEPFAL True PC9_epitope_Rep3 1086.4804305958999 1086.47932993586 69.768 2 0.21157956336424869 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 93608 4210 RSYSSVIEK True NCI_RA007_Epitope_Rep4 1067.56112344475 1067.56002993586 22.505 2 0.21157058939562676 0.00036105427849320016 0.9438714419765777 ['ENSG00000142197|ENST00000691173|DOP1B', 'nc|ENSG00000142197|Q9Y3R5-2|DOP1B'] 88482 12945 RAAEEFVNV True PC9_epitope_Rep3 1033.5192586327698 1033.5181699358602 54.815 2 0.21156719006264327 0.00036105427849320016 0.9438714419765777 ['ENSG00000132661|ENST00000254998|NXT1'] 84628 12730 QHDPYITSI True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 54.271 2 0.21156607899621807 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 21032 11299 ERDAYVQAL True PC9_epitope_Rep2 1063.52982331647 1063.5287299358602 48.785 2 0.21156514441310206 0.00036105427849320016 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 113298 13808 TQIDHYVGI True PC9_epitope_Rep4 1044.52400966004 1044.52290993586 61.009 2 0.21155805999381927 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 27666 18814 FQDDRYLYM True PC9_epitope_Rep5 1249.54375912845 1249.5426699358602 77.381 2 0.21155728283034664 0.00036105427849320016 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000582445.1_1_18:18625251-18629157:-|nuORF', 'ENSG00000134318|ENST00000315872|ROCK2'] 114047 14839 TRNDYVMMY True PC9_epitope_Rep2 1191.50526544475 1191.50416993586 62.343 2 0.2115353315956935 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 92265 19397 RQLDMELVSV True PC9_epitope_Rep5 1188.61725842188 1188.6161699358602 79.656 2 0.2115175897145158 0.00036105427849320016 0.9438714419765777 ['ENSG00000089902|ENST00000262241|RCOR1'] 23960 7830 EYNTVASKF True NCI_RA007_Epitope_Rep4 1057.50802524273 1057.5069299358602 36.812 2 0.21151242357047545 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'ENST00000475640.1_1_3:122437249-122439770:+|nuORF'] 138951 14173 YSEIKDFLSY True H1975_Epitope_Rep3 1263.60231955039 1263.6012299358601 59.851 2 0.21150940701981025 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-4|DCLRE1C', 'ENST00000492201.5_1_10:14962436-14970058:-|nuORF'] 33915 8426 GM[Oxidation]DVELTVEER True NCI_RA007_Epitope_Rep1 1292.59183190012 1292.59072993586 36.777 2 0.21150651524870254 0.00036105427849320016 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 105981 13592 SVLISLKQA True PC9_epitope_Rep2 957.58588164061 957.58478993586 57.571 2 0.2114958381498073 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000122705|P09496-5|CLTA', 'ENSG00000122705|ENST00000345519|CLTA', 'nc|ENSG00000122705|P09496-4|CLTA', 'nc|ENSG00000122705|P09496-3|CLTA', 'nc|ENSG00000122705|P09496|CLTA'] 22316 6102 ETEEGAHDLY True H1975_Epitope_Rep3 1162.4778473132599 1162.4767499358602 28.484 2 0.21149229136027387 0.00036105427849320016 0.9438714419765777 ['ENST00000431534.5_1_22:41925289-41928713:-|nuORF', 'nc|ENSG00000100413|Q9Y535-2|POLR3H', 'ENSG00000100413|ENST00000355209|POLR3H'] 28015 20565 FQYESKVFYL True PC9_epitope_Rep5 1322.6546894764197 1322.65358993586 84.148 2 0.2114825053768574 0.00036105427849320016 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 22804 6346 EVDSGRQIEY True H1975_Epitope_Rep2 1194.5516809598598 1194.5505899358602 29.339 2 0.2114527448855003 0.00036105427849320016 0.9438714419765777 ['ENSG00000113368|ENST00000261366|LMNB1', 'ENST00000504788.5_1_5:126112928-126171953:+|nuORF', 'LMNB1|p.P510Qfs*18|1|0.23|ENSG00000113368|chr5:126826020-126826020|C/-|frameshift_variant'] 85338 19149 QLDDLKVEL True PC9_epitope_Rep2 1071.58119018299 1071.58008993586 79.028 2 0.21144291978121604 0.00036105427849320016 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 11832 18635 DHMRFISEL True PC9_epitope_Rep3 1146.54917886206 1146.5480899358602 76.9 2 0.2114295939051969 0.00036105427849320016 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 87085 12419 QSELVGQLY True H1975_Epitope_Rep1 1035.52367530687 1035.52317496793 52.804 1 0.2114293057019493 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 2279 18675 AEPLEIILHLP True H1975_Epitope_Rep3 1243.71762408615 1243.71652993586 78.306 2 0.21141799011932247 0.00036105427849320016 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 8239 14685 ATIIDILTK True NCI_RA007_Epitope_Rep4 986.60119735158 986.6006449679301 63.901 1 0.21141034513180124 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 25245 11588 FEDENFILK True H1975_Epitope_Rep1 1153.5655401188499 1153.56444993586 49.56 2 0.21140822688672936 0.00036105427849320016 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 38629 18843 HHIYLEGTLL True PC9_epitope_Rep5 1194.6397081186199 1194.6386099358601 77.496 2 0.21139806876085618 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 8486 8863 ATVAVPLVGK True NCI_RA007_Epitope_Rep5 953.5909670210499 953.58986993586 40.757 2 0.2113897591827985 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 14244 4561 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 21.838 2 0.2113878185582007 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 71123 19118 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 79.355 2 0.2113810805803275 0.00036105427849320016 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 37880 8282 HEAFESDLAA True H1975_Epitope_Rep2 1088.47745339044 1088.47634993586 36.807 2 0.21136316394896457 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 76540 4798 NTDPHSQEYV True H1975_Epitope_Rep2 1188.5047307674402 1188.50362993586 23.545 2 0.21136298126003805 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 104731 9569 STDKAEYTFY True H1975_Epitope_Rep2 1223.53463391339 1223.53352993586 41.781 2 0.21135999645142786 0.00036105427849320016 0.9438714419765777 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 89633 11035 RETNLDSLPL True NCI_RA007_Epitope_Rep3 1156.6088019131598 1156.6077099358602 50.504 2 0.2113414132564575 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 70615 7182 MADKNIQYY True H1975_Epitope_Rep2 1144.52229540788 1144.52118993586 32.559 2 0.21133034589116012 0.00036105427849320016 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30', 'ENST00000604751.1_1_9:115618996-115637523:+|nuORF'] 107183 20237 SYNPLWLRI True PC9_epitope_Rep4 1160.6342288153598 1160.63312993586 85.983 2 0.21132771950380602 0.00036105427849320016 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 107155 17651 SYNEHWNYL True PC9_epitope_Rep1 1224.5199869087598 1224.5188899358602 72.687 2 0.21132265410302087 0.00036105427849320016 0.9438714419765777 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 138144 18471 YQLGELVKV True PC9_epitope_Rep4 1047.59644632431 1047.5953499358602 79.12 2 0.21132129683173206 0.00036105427849320016 0.9438714419765777 ['ENSG00000130227|ENST00000252512|XPO7'] 132640 15140 VYQHLFTRI True PC9_epitope_Rep1 1175.6451278522297 1175.64349490379 63.058 3 0.2113190096713623 0.00036105427849320016 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 42238 3627 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 18.971 2 0.2113145063503958 0.00036105427849320016 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 86600 14521 QRDGIITQL True PC9_epitope_Rep1 1042.5771078620598 1042.5760099358602 60.68 2 0.21131168131343658 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF'] 25320 8029 FEEM[Oxidation]IQQIK True NCI_RA007_Epitope_Rep2 1180.57981066444 1180.5787099358602 35.863 2 0.21130904588621416 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 460 17033 AAMEDLTRL True PC9_epitope_Rep1 1018.5117307241799 1018.51062993586 70.341 2 0.211303668232597 0.00036105427849320016 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000523646.1_1_8:109240494-109241379:-|nuORF'] 18278 7199 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep2 1176.6060254122801 1176.6049299358601 32.622 2 0.21130265374923 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 28937 6788 FTEPNRHFY True H1975_Epitope_Rep2 1209.5567067706497 1209.5550749037902 31.026 3 0.2112956008563196 0.00036105427849320016 0.9438714419765777 ['ENSG00000165355|ENST00000298097|FBXO33'] 17516 12708 EHINEGETAML True PC9_epitope_Rep1 1242.55505208814 1242.5539499358601 53.753 2 0.21129521060578726 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 75749 14198 NRAEYYHLL True PC9_epitope_Rep1 1177.58800689893 1177.58635490379 59.435 3 0.21128964894542532 0.00036105427849320016 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 105348 7188 STWEGIQAGK True NCI_RA007_Epitope_Rep5 1075.5298233164697 1075.5287299358602 34.327 2 0.21128452173822695 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 60215 12517 LIDADPYLKY True H1975_Epitope_Rep2 1209.62814037541 1209.6270499358602 53.24 2 0.21128166575717036 0.00036105427849320016 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2'] 8075 8862 ATEESDLAQQY True H1975_Epitope_Rep2 1253.54117584581 1253.5400699358602 39.055 2 0.21128079442999692 0.00036105427849320016 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 77207 11961 NYIDKVRFL True NCI_RA007_Epitope_Rep1 1166.64479349906 1166.64368993586 50.512 2 0.211280743805214 0.00036105427849320016 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 8421 5792 ATQVAVSVPK True NCI_RA007_Epitope_Rep3 998.5760452328999 998.57494993586 29.76 2 0.21127758387459608 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 43 13171 [Acetylation]-AAAAVVEFQR True H1975_Epitope_Rep3 1102.5771081783598 1102.5760099358602 55.913 2 0.21126961380562725 0.00036105427849320016 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 113548 18055 TQVTALIKL True PC9_epitope_Rep4 985.61718176889 985.61608993586 77.512 2 0.2112686275318739 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 110685 20501 TIYKDFVYI True PC9_epitope_Rep3 1160.6117620352798 1160.6106699358602 84.117 2 0.2112663000992622 0.00036105427849320016 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 26147 19584 FHNELLTQL True PC9_epitope_Rep1 1113.5818588893299 1113.5807699358602 80.157 2 0.21126357155462117 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 138842 4190 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 21.224 2 0.2112618046562644 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 74748 19217 NLLPKLHIV True PC9_epitope_Rep3 1045.66480066765 1045.6637099358602 79.137 2 0.2112542628210179 0.00036105427849320016 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 53771 16250 KYFEKQFEL True PC9_epitope_Rep1 1230.6284747285797 1230.62683490379 67.323 3 0.21125310032141148 0.00036105427849320016 0.9438714419765777 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 138120 15054 YQITQINHGL True PC9_epitope_Rep1 1185.61422164677 1185.6131299358601 62.723 2 0.21124152469926713 0.00036105427849320016 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 93825 11549 RVDPIGPLSY True H1975_Epitope_Rep2 1115.59750895347 1115.59640993586 49.485 2 0.21123881661165306 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 37601 10233 GYSFTTTAER True PC9_epitope_Rep3 1131.51965255559 1131.5185499358602 44.312 2 0.21123841457809395 0.00036105427849320016 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 109889 13936 THNIIVNQL True PC9_epitope_Rep5 1050.5821932425 1050.58108993586 58.626 2 0.21123474984210158 0.00036105427849320016 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 96116 9260 SEDSRFITV True H1975_Epitope_Rep1 1052.51383889916 1052.51274993586 40.53 2 0.21122874054754104 0.00036105427849320016 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG'] 107159 17530 SYNEHWNYL True PC9_epitope_Rep5 1224.5199869087598 1224.5188899358602 72.434 2 0.21122685962729856 0.00036105427849320016 0.9438714419765777 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 24644 8559 FASHVSPEV True PC9_epitope_Rep2 971.47124581119 971.47014993586 38.283 2 0.21122599847517123 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 116746 9046 TYLEKAIKI True NCI_RA007_Epitope_Rep5 1077.6433965167298 1077.6422899358602 41.454 2 0.21122597132088966 0.00036105427849320016 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 9915 12117 AYPHNLMTF True NCI_RA007_Epitope_Rep5 1092.50625142092 1092.5051499358601 53.262 2 0.21122291610611418 0.00036105427849320016 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 123291 16362 VHSEQVFAL True PC9_epitope_Rep3 1028.5290950404797 1028.5279899358602 68.071 2 0.21119538728940987 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 91301 21016 RLYPWGVVEV True PC9_epitope_Rep3 1216.6604435631998 1216.65934993586 86.116 2 0.2111775531658304 0.00036105427849320016 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 18820 8542 ELEDSTLRY True H1975_Epitope_Rep1 1124.5349682665599 1124.5338699358601 37.783 2 0.2111768136090324 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 77075 20579 NWPSRPYLF True PC9_epitope_Rep1 1178.58727862294 1178.5861899358601 83.971 2 0.211166931402663 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 26113 19560 FHFTTPAL True PC9_epitope_Rep1 932.4756029156399 932.4745099358599 80.063 2 0.21116667197342226 0.00036105427849320016 0.9438714419765777 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 23807 13143 EYLENALKL True NCI_RA007_Epitope_Rep5 1091.58627556343 1091.5851699358602 57.232 2 0.21116345798057382 0.00036105427849320016 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7', 'ENSG00000183347|ENST00000370456|GBP6'] 84832 10279 QHLQATGVSL True PC9_epitope_Rep4 1052.56145779792 1052.56036993586 47.225 2 0.21115398732924698 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 87005 10283 QRYSEDRIGL True PC9_epitope_Rep5 1235.6258489596298 1235.62420490379 44.541 3 0.2111292453357875 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 113305 13071 TQIDHYVGI True PC9_epitope_Rep6 1044.52400966004 1044.52290993586 61.884 2 0.21112514807755567 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 22213 8485 ETDIVVDHY True H1975_Epitope_Rep2 1089.49785448185 1089.4967499358602 37.589 2 0.21112064274804068 0.00036105427849320016 0.9438714419765777 ['CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 86602 14409 QRDGIITQL True PC9_epitope_Rep5 1042.5771078620598 1042.5760099358602 60.423 2 0.21111646695585928 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF'] 75892 8292 NRDQYSHLL True PC9_epitope_Rep4 1144.56252042708 1144.56088490379 39.355 3 0.21111500748963213 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 74406 6547 NIVEAAAVR True H1975_Epitope_Rep3 941.5294293936498 941.52832993586 30.15 2 0.21111053753896222 0.00036105427849320016 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'RPS26|p.I41M|1|0.12|ENSG00000197728|chr12:56042544-56042544|T/G|missense_variant', 'ENST00000475510.1_1_3:124452395-124452491:-|nuORF', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 34368 3678 GPSSVEDIKAK True NCI_RA007_Epitope_Rep5 1129.5979028762897 1129.5962549037902 20.182 3 0.21110427824097705 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 57008 7255 LEEEGEQFVK True H1975_Epitope_Rep1 1206.5768330785397 1206.5757299358602 32.917 2 0.21110338920365296 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'nc|ENSG00000116171|P22307-6|SCP2', 'nc|ENSG00000116171|P22307-2|SCP2', 'nc|ENSG00000116171|P22307-4|SCP2'] 134810 18090 WYQTKFETL True PC9_epitope_Rep2 1214.5971746002997 1214.5960699358602 74.885 2 0.2110930786335771 0.00036105427849320016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 107055 21312 SYLPLAHMF True PC9_epitope_Rep5 1077.53173789277 1077.53064993586 87.031 2 0.21109109050104063 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 49010 8129 KFIDTTSKF True NCI_RA007_Epitope_Rep2 1085.57571087973 1085.57460993586 36.253 2 0.2110879848588061 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 133437 16705 WGEEWGMGGY True H1975_Epitope_Rep2 1170.4440450871798 1170.44294993586 69.492 2 0.2110748207868452 0.00036105427849320016 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'nc|ENSG00000135047|P07711-3|CTSL'] 84700 17031 QHFDTIYSI True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 73.502 2 0.21107465128772704 0.00036105427849320016 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 21704 7438 ERYKEVAEL True PC9_epitope_Rep4 1135.5873381925899 1135.58624993586 35.961 2 0.21107238297900396 0.00036105427849320016 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 2484 4167 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 21.146 2 0.2110625726329036 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 48356 7491 KEAEPIPETV True H1975_Epitope_Rep2 1111.57610480255 1111.5750099358602 33.764 2 0.2110577797788099 0.00036105427849320016 0.9438714419765777 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6'] 110467 20480 TIPEILPKL True PC9_epitope_Rep1 1022.6375828602999 1022.6364899358599 83.589 2 0.2110573081328923 0.00036105427849320016 0.9438714419765777 ['ENSG00000121879|ENST00000263967|PIK3CA'] 88409 17681 QYQKVPVLF True PC9_epitope_Rep4 1120.6280808057597 1120.6269899358601 76.034 2 0.21105575455550754 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 48976 20356 KFAEEFYSF True PC9_epitope_Rep5 1166.5284263341398 1166.5278749679298 83.334 1 0.21103289946560289 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 114922 8009 TTEVHPELY True H1975_Epitope_Rep3 1087.5185899264297 1087.51748993586 35.779 2 0.21102811965130683 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 136483 16140 YHIDVGTQTF True PC9_epitope_Rep4 1179.5560380643099 1179.5549499358601 70.022 2 0.21102237304033764 0.00036105427849320016 0.9438714419765777 ['ENSG00000118496|ENST00000237281|FBXO30'] 138805 7036 YSDGYGRVY True H1975_Epitope_Rep2 1078.47197408718 1078.47086993586 31.988 2 0.21100216174498418 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 94884 18720 RYPAIIYNI True PC9_epitope_Rep4 1121.62332977849 1121.62222993586 80.087 2 0.21099245454784343 0.00036105427849320016 0.9438714419765777 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000507477.1_1_17:47780142-47780651:-|nuORF', 'ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1', 'SPOP-SLC35B1|1|fusion'] 30082 20986 FYNLLTRTF True PC9_epitope_Rep3 1173.61824439805 1173.6171499358602 85.999 2 0.2109872111725593 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 21363 13789 ERLQIDEQL True PC9_epitope_Rep4 1142.5931518490197 1142.5920499358601 60.935 2 0.2109759803187975 0.00036105427849320016 0.9438714419765777 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF', 'ENST00000492846.1_1_X:147022154-147024854:+|nuORF', 'TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1'] 8369 8862 [Acetylation]-ATNFLAHEK True H1975_Epitope_Rep3 1071.53490901321 1071.53380993586 39.09 2 0.2109716774849433 0.00036105427849320016 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000534232.5_1_8:144663861-144679543:-|nuORF'] 69912 12982 LYDIDVAK True PC9_epitope_Rep5 935.49639792987 935.49530993586 54.944 2 0.21097143502709773 0.00036105427849320016 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 106994 20467 SYLESFYHM True PC9_epitope_Rep3 1175.49574630687 1175.49464993586 83.984 2 0.21097072527516358 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 83037 21696 PYLDKFFTL True PC9_epitope_Rep2 1142.6011973515801 1142.60010993586 88.931 2 0.2109642291145645 0.00036105427849320016 0.9438714419765777 ['ENSG00000130158|ENST00000294618|DOCK6'] 84236 4990 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 24.279 2 0.21095647153247574 0.00036105427849320016 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 71418 4928 M[Oxidation]INTDLSR True NCI_RA007_Epitope_Rep5 964.4647809122 964.46368993586 25.657 2 0.2109517850784363 0.00036105427849320016 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000567229.5_1_15:66791747-66793486:-|nuORF', 'ENST00000438116.2_1_22:40983088-40983169:-|nuORF'] 125399 9294 VLTEIIASR True H1975_Epitope_Rep3 1000.5916952970399 1000.59058993586 40.744 2 0.21094723874032553 0.00036105427849320016 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 113757 6046 TRDPQFQKL True PC9_epitope_Rep2 1131.6036569630699 1131.6020249037902 28.648 3 0.2109365330298883 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 94094 4045 RVYGGLTTK True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 21.819 2 0.21093229541952818 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 108472 10633 TEEQPMEVSV True H1975_Epitope_Rep2 1147.50670491339 1147.50560993586 45.923 2 0.2109259576745285 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-5|NCAPH2'] 114849 12042 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.49807496793 51.481 1 0.2109247120350904 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 114484 8335 TSFDGSLIQK True NCI_RA007_Epitope_Rep3 1094.56078909158 1094.5596899358602 39.9 2 0.21092409381812943 0.00036105427849320016 0.9438714419765777 ['ZBTB33|p.H573Sfs*2|1|0.19|ENSG00000177485|chrX:120255129-120255130|-/T|frameshift_variant', 'ENSG00000177485|ENST00000557385|ZBTB33'] 26005 18464 FHDDWISSI True PC9_epitope_Rep6 1118.5032742154601 1118.5021699358601 83.662 2 0.2109155490278055 0.00036105427849320016 0.9438714419765777 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 12614 12954 DLEALLNSK True H1975_Epitope_Rep3 1001.53932537101 1001.53822993586 55.058 2 0.21090700322605627 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 36097 8194 GVEGSLIVEK True NCI_RA007_Epitope_Rep2 1029.57062549929 1029.5695299358601 36.508 2 0.2109054123955049 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 86850 12526 QRQDIAFAY True PC9_epitope_Rep6 1110.5458077337798 1110.54470993586 59.615 2 0.21087435731826062 0.00036105427849320016 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 30002 18356 FYGPQVNNI True PC9_epitope_Rep2 1050.51344497634 1050.5123499358601 75.937 2 0.21087091143871609 0.00036105427849320016 0.9438714419765777 ['ENSG00000106299|ENST00000223023|WASL'] 6736 17499 AQDFRVLYV True PC9_epitope_Rep6 1109.58694426977 1109.58584993586 79.939 2 0.2108611645848376 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF'] 85012 20506 QIFNGTFVKL True PC9_epitope_Rep1 1165.64954452633 1165.64844993586 83.688 2 0.21084715796038683 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 64987 11027 LSDFESGLKY True H1975_Epitope_Rep2 1157.5604547384098 1157.5593499358602 47.445 2 0.21084531159712405 0.00036105427849320016 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 36605 22319 GVLKVFLENV True PC9_epitope_Rep1 1116.6542955536 1116.6531899358602 90.662 2 0.21084092492859016 0.00036105427849320016 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 46260 9763 ITDVDNGYY True H1975_Epitope_Rep3 1058.4556553167 1058.45507496793 42.576 1 0.21083635988328714 0.00036105427849320016 0.9438714419765777 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 53612 19241 KVYLEDGFAYV True PC9_epitope_Rep4 1302.6496040959798 1302.6485099358601 82.112 2 0.2108285814784172 0.00036105427849320016 0.9438714419765777 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 23918 19660 EYNNIFHTF True PC9_epitope_Rep2 1183.52982331647 1183.5287299358602 81.007 2 0.210823232971285 0.00036105427849320016 0.9438714419765777 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 89583 4004 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 21.656 2 0.2108164568679919 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 91486 4802 RNVSTGDVNVE True H1975_Epitope_Rep3 1188.5734790335998 1188.5723899358602 23.598 2 0.21081456177211017 0.00036105427849320016 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 73874 13697 NHHLFTTTI True PC9_epitope_Rep1 1082.5508931142201 1082.5497899358602 57.537 2 0.2107965643230049 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 130673 9792 VVDEDHELIY True H1975_Epitope_Rep1 1230.5768330785402 1230.5757299358602 42.592 2 0.21079001309884712 0.00036105427849320016 0.9438714419765777 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 24164 18729 EYTDVLQKI True PC9_epitope_Rep5 1107.58119018299 1107.58008993586 77.056 2 0.21078810021264782 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 10095 20965 AYVLNIVRF True PC9_epitope_Rep3 1093.62841515893 1093.62730993586 85.922 2 0.21076268289340572 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 22187 10937 ETDEKDFYL True H1975_Epitope_Rep2 1158.5080848123798 1158.50698993586 47.102 2 0.21075457377707882 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 7398 4831 ASAIPAYSK True NCI_RA007_Epitope_Rep3 906.4810822189 906.47998993586 25.98 2 0.21073235684962227 0.00036105427849320016 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1'] 131507 17101 VVVDPIQSV True PC9_epitope_Rep6 954.53859709502 954.53750993586 78.354 2 0.21073182470196253 0.00036105427849320016 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 77218 21040 NYIEFTRIL True PC9_epitope_Rep1 1167.62880908175 1167.6277099358601 85.76 2 0.21072345370390305 0.00036105427849320016 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 8069 13918 ATEEAPYWTY True H1975_Epitope_Rep2 1229.5240692296898 1229.5229699358601 58.683 2 0.21071227175213483 0.00036105427849320016 0.9438714419765777 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'CHPT1|p.C163Lfs*31|1|0.31|ENSG00000111666|chr12:101714559-101714560|-/T|frameshift_variant', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 70336 16822 LYPQFMFHL True NCI_RA007_Epitope_Rep3 1194.5895871220598 1194.58848993586 74.042 2 0.2106970276598716 0.00036105427849320016 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 34765 15830 GQSELASRLTL True PC9_epitope_Rep2 1173.6353510141698 1173.63424993586 66.149 2 0.21069673004138498 0.00036105427849320016 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 24494 20795 FAIPLIEKL True PC9_epitope_Rep4 1042.64266824074 1042.6415699358602 88.136 2 0.21069601133590235 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 38223 5592 HEVKDNYIP True H1975_Epitope_Rep2 1113.5454733806098 1113.54436993586 26.511 2 0.21069349928799766 0.00036105427849320016 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 140328 11499 YYEEQHPEL True PC9_epitope_Rep3 1206.5193182024198 1206.51822993586 49.232 2 0.21069123448940374 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 77241 19173 NYIKDLNIL True PC9_epitope_Rep4 1104.61791004488 1104.6168099358601 81.846 2 0.21068990890575381 0.00036105427849320016 0.9438714419765777 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 54804 18888 LAFEEEFGRV True PC9_epitope_Rep4 1195.5873381925899 1195.58624993586 80.738 2 0.21068091349171944 0.00036105427849320016 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 138074 6474 YQDTPKQI True PC9_epitope_Rep5 991.4974605590298 991.49636993586 29.875 2 0.21067445915794653 0.00036105427849320016 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 95315 9851 SAFGVIIEK True NCI_RA007_Epitope_Rep3 962.54368247546 962.54258993586 45.822 2 0.21067045303628232 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 71555 6055 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep2 1143.50189469691 1143.5007899358602 28.268 2 0.21066938854512665 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 52646 22042 KQFDDVLIYL True PC9_epitope_Rep1 1252.6703395405598 1252.66924993586 89.598 2 0.21066751196103292 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105948|A0AVF1-2|IFT56', 'nc|ENSG00000105948|A0AVF1-3|IFT56', 'ENSG00000105948|ENST00000464848|TTC26'] 20704 12931 EQISDIDDAVR True PC9_epitope_Rep5 1259.59935942827 1259.5982699358601 54.751 2 0.21066233952431965 0.00036105427849320016 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 100257 18183 SLLQTLYKV True PC9_epitope_Rep6 1063.62774645259 1063.62664993586 82.581 2 0.21066150390173427 0.00036105427849320016 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 22959 7928 EVIEIM[Oxidation]TDR True NCI_RA007_Epitope_Rep1 1120.54342515572 1120.5423299358602 34.831 2 0.2106573667951133 0.00036105427849320016 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 89042 6318 REEEYYTEP True H1975_Epitope_Rep3 1214.5091474415399 1214.50804993586 29.296 2 0.2106543180773989 0.00036105427849320016 0.9438714419765777 ['ENSG00000113621|ENST00000358387|TXNDC15', 'nc|ENSG00000113621|Q96J42-2|TXNDC15'] 137331 22463 YLIPLLERL True PC9_epitope_Rep1 1128.69068106232 1128.68958993586 91.211 2 0.21065249017983304 0.00036105427849320016 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 42030 7165 IEDVQKLAA True H1975_Epitope_Rep3 985.5444107514498 985.54330993586 32.534 2 0.21065190998079772 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 69228 14364 LVNEVTEFAK True PC9_epitope_Rep3 1148.607739284 1148.60664993586 60.343 2 0.2106514346094822 0.00036105427849320016 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB'] 49004 21262 KFIDPIYQVW True PC9_epitope_Rep2 1307.69140933831 1307.6903099358601 87.244 2 0.2106421133547182 0.00036105427849320016 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 85805 5010 QLYWSHPRK True NCI_RA007_Epitope_Rep2 1213.6356257976897 1213.63399490379 24.111 3 0.21062576958591117 0.00036105427849320016 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 70085 20146 LYIGWDKHYGF True PC9_epitope_Rep5 1397.67682190333 1397.67572993586 82.539 2 0.21062390129178463 0.00036105427849320016 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 52669 17817 KQFEPNDFYL True PC9_epitope_Rep6 1299.6135529404298 1299.61244993586 81.164 2 0.21061146334731806 0.00036105427849320016 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 138029 8462 YQDPDATSLKY True H1975_Epitope_Rep1 1299.59829679911 1299.5971899358601 37.478 2 0.21059930846086916 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'nc|ENSG00000131778|Q86WJ1-5|CHD1L', 'nc|ENSG00000131778|Q86WJ1-3|CHD1L', 'nc|ENSG00000131778|Q86WJ1-2|CHD1L'] 75148 8026 NNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep1 975.50591744819 975.50480993586 35.215 2 0.2105926383564694 0.00036105427849320016 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 86509 7202 QRAITGASL True PC9_epitope_Rep2 915.5137793295099 915.51268993586 33.093 2 0.21059206932221372 0.00036105427849320016 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 107379 19645 SYSPLLREF True PC9_epitope_Rep5 1110.57095985246 1110.5698699358602 80.619 2 0.21059186061782095 0.00036105427849320016 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion', 'ENST00000370677.4_1_20:60920618-60942301:-|nuORF', 'nc|ENSG00000130702|O15230-2|LAMA5'] 89149 8853 REGPYSISV True H1975_Epitope_Rep2 1006.5083595959 1006.50726993586 39.02 2 0.21058728595313625 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 49443 16538 KIQEILTQV True PC9_epitope_Rep1 1070.63356010902 1070.6324699358602 68.436 2 0.2105742076927564 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136231|O00425-2|IGF2BP3', 'PRKCA-IGF2BP3|1|fusion', 'ENSG00000136231|ENST00000258729|IGF2BP3', 'ENST00000454907.1_1_6:167114584-167114857:-|nuORF'] 114884 5367 TTEERTQLY True H1975_Epitope_Rep2 1139.54586730343 1139.5447699358601 25.684 2 0.21056619533999227 0.00036105427849320016 0.9438714419765777 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13', 'ENST00000471302.2_1_1:231047214-231057243:-|nuORF'] 17452 19621 EHGIVVFSL True PC9_epitope_Rep4 999.5389314481899 999.53782993586 83.589 2 0.2105543498781155 0.00036105427849320016 0.9438714419765777 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 54266 15527 KYPLNLYLL True NCI_RA007_Epitope_Rep3 1135.66413196131 1135.66302993586 68.636 2 0.21051675675268525 0.00036105427849320016 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 84975 10344 QIDPTIQRV True PC9_epitope_Rep2 1068.5927579262 1068.5916699358602 45.114 2 0.21051646591214473 0.00036105427849320016 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q922U2'] 116398 22091 TWFPKTPMLF True PC9_epitope_Rep5 1266.6471019981798 1266.64600993586 90.004 2 0.21050123807087998 0.00036105427849320016 0.9438714419765777 ['ENSG00000170852|ENST00000304056|KBTBD2'] 138867 16740 YSDPNQIWIY True H1975_Epitope_Rep2 1297.59790287629 1297.5968099358602 69.625 2 0.21049091666996153 0.00036105427849320016 0.9438714419765777 ['ENSG00000178234|ENST00000430044|GALNT11'] 95030 11122 RYQTQPVTL True PC9_epitope_Rep1 1104.5927579261997 1104.5916699358602 47.666 2 0.21048933083506655 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 84137 5970 QEQRLQGEVVA True H1975_Epitope_Rep3 1255.65206370747 1255.65096993586 27.975 2 0.2104857838649764 0.00036105427849320016 0.9438714419765777 ['ENSG00000161654|ENST00000293406|LSM12', 'nc|ENSG00000161654|Q3MHD2-2|LSM12'] 46237 9233 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 40.471 2 0.21048413835476623 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 43401 9932 IHSEPLGV True PC9_epitope_Rep1 850.45486747106 850.45376993586 43.065 2 0.21047233500851684 0.00036105427849320016 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 22148 8792 ESYSVYVYK True NCI_RA007_Epitope_Rep4 1136.5389910178399 1136.5378899358602 40.629 2 0.2104714209808718 0.00036105427849320016 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 47734 10252 IYQKAFEHL True PC9_epitope_Rep2 1147.6025943339098 1147.60093490379 44.767 3 0.21045651954657607 0.00036105427849320016 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 130493 12284 VTVSDLQHV True PC9_epitope_Rep4 996.5240096600402 996.52290993586 55.067 2 0.21044962927713984 0.00036105427849320016 0.9438714419765777 ['ENSG00000068489|ENST00000262293|PRR11'] 111729 9877 TLQALQIPAAK True H1975_Epitope_Rep1 1152.6866583110398 1152.68556993586 42.925 2 0.21044608851332006 0.00036105427849320016 0.9438714419765777 ['ENSG00000140575|ENST00000268182|IQGAP1', 'IQGAP1|p.P711Qfs*22|1|0.49|ENSG00000140575|chr15:90467544-90467544|T/-|frameshift_variant'] 133048 9972 VYVVGTAHF True NCI_RA007_Epitope_Rep3 991.5127167003499 991.51160993586 46.308 2 0.21044569040442837 0.00036105427849320016 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 77558 12977 NYSNIRFQF True NCI_RA007_Epitope_Rep5 1187.57235683479 1187.5712499358601 56.595 2 0.21043682034028122 0.00036105427849320016 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 19688 16994 ELSDFISYLQR True NCI_RA007_Epitope_Rep2 1369.68778050985 1369.6866899358602 70.839 2 0.21043547547363206 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 28411 11121 FSDVNMQEY True H1975_Epitope_Rep3 1131.4542754177098 1131.45377496793 47.872 1 0.21041670677192023 0.00036105427849320016 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 102008 4665 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 23.067 2 0.210414828420574 0.00036105427849320016 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 31512 10294 GEEWKGYVV True H1975_Epitope_Rep1 1065.5131106231697 1065.51200993586 44.54 2 0.21040471058498172 0.00036105427849320016 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000497406.2_1_12:59414000-59414099:+|nuORF', 'ENST00000397390.3_1_9:19200870-19200993:-|nuORF'] 102530 5719 SQADVSQKL True PC9_epitope_Rep1 974.50327421546 974.50216993586 26.817 2 0.21040088095702053 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000088899|O60299-2|LZTS3', 'ENSG00000088899|ENST00000337576|LZTS3'] 103336 11790 SQVEDLERV True PC9_epitope_Rep5 1073.53530261973 1073.5342099358602 50.347 2 0.21039488411320686 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000079616|Q14807-2|KIF22', 'ENSG00000079616|ENST00000160827|KIF22', 'ENST00000568312.1_1_16:29815990-29816628:+|nuORF'] 92277 13428 RQLEDTVAL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 56.666 2 0.21039464926675802 0.00036105427849320016 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 40469 8427 HSDQQVFEY True H1975_Epitope_Rep3 1151.4883524273098 1151.48724993586 37.398 2 0.2103912684201207 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'SNTB2-CIRH1A|1|fusion'] 131261 6923 VVQEPGQVFK True NCI_RA007_Epitope_Rep3 1129.6131590176099 1129.61206993586 34.333 2 0.21039116925933887 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000570007.1_1_16:28117306-28117714:-|nuORF'] 98884 12733 SIWDETLYK True NCI_RA007_Epitope_Rep3 1153.5655401188499 1153.56444993586 57.32 2 0.2103769160249233 0.00036105427849320016 0.9438714419765777 ['ENSG00000155876|ENST00000380527|RRAGA', 'ENSG00000083750|ENST00000374941|RRAGB', 'nc|ENSG00000083750|Q5VZM2|RRAGB', 'ENST00000474757.1_1_X:55757854-55777647:+|nuORF'] 64259 19998 LQLDPAQIYRV True PC9_epitope_Rep2 1314.7295857521801 1314.7284899358601 82.325 2 0.21037663474509208 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000179750|ENST00000333467|APOBEC3B'] 120434 14699 VFTPVVQRI True PC9_epitope_Rep4 1057.6284151589298 1057.62730993586 64.475 2 0.21037508264909882 0.00036105427849320016 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 135923 11057 YEVKELYVP True NCI_RA007_Epitope_Rep3 1138.5910265906998 1138.58992993586 50.595 2 0.21036742160677835 0.00036105427849320016 0.9438714419765777 ['ENSG00000138801|ENST00000265174|PAPSS1'] 63911 18430 LPVWLENHTA True PC9_epitope_Rep5 1178.60840799034 1178.60730993586 75.911 2 0.21036446077439122 0.00036105427849320016 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 89650 9613 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 41.953 3 0.21036415323591506 0.00036105427849320016 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 133009 10163 VYVQHPITF True NCI_RA007_Epitope_Rep3 1102.5811306133398 1102.58002993586 47.063 2 0.2103633119155293 0.00036105427849320016 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 52053 20701 KLILLITQV True PC9_epitope_Rep2 1039.7005174700298 1039.69942993586 85.063 2 0.21035778723805132 0.00036105427849320016 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 38247 14156 HEYPWILSA True H1975_Epitope_Rep3 1114.54474510462 1114.54364993586 59.783 2 0.2103549921492461 0.00036105427849320016 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 38475 12466 HHALPITDL True PC9_epitope_Rep2 1015.54507945779 1015.5439899358599 53.261 2 0.2103545928065529 0.00036105427849320016 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 29147 18381 FTVAELKQL True PC9_epitope_Rep4 1047.59644632431 1047.5953499358602 78.769 2 0.2103545115550083 0.00036105427849320016 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 94723 13856 RYLEQLHQL True PC9_epitope_Rep5 1198.64585612822 1198.64422490379 58.318 3 0.21035083268066931 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 61260 15112 LLDSDEPLVY True H1975_Epitope_Rep2 1162.57577044938 1162.5746699358601 63.282 2 0.2103482777548051 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 88215 20350 QYASAFHFL True PC9_epitope_Rep5 1082.51853035678 1082.51742993586 83.311 2 0.21034674227548725 0.00036105427849320016 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 47650 12854 IYPPKLHQF True PC9_epitope_Rep3 1141.62841515893 1141.62676490379 54.461 3 0.2103452193902436 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 137882 6434 YPM[Oxidation]AVGLNK True NCI_RA007_Epitope_Rep5 1007.5110028286299 1007.50990993586 31.416 2 0.21034373615419022 0.00036105427849320016 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 70581 22242 LYYDAIWHF True PC9_epitope_Rep5 1226.5760452328998 1226.57494993586 90.561 2 0.21033038956243696 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 116531 19790 TYEGIFKTL True PC9_epitope_Rep5 1070.56481184286 1070.56370993586 81.167 2 0.21032913273786322 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 89841 20098 RFLDDLGLKF True PC9_epitope_Rep4 1222.6710082468996 1222.66936490379 85.439 3 0.2103285336980214 0.00036105427849320016 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 4388 10345 AIRLELQGPR True PC9_epitope_Rep4 1151.6774906096698 1151.67583490379 47.485 3 0.21032176636107525 0.00036105427849320016 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 29283 10399 FVDKNNDLLY True H1975_Epitope_Rep2 1239.61355294043 1239.61244993586 45.013 2 0.21031883137618432 0.00036105427849320016 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 10012 15173 AYTLLLHTW True NCI_RA007_Epitope_Rep4 1116.59678067748 1116.59568993586 65.958 2 0.21030905402902142 0.00036105427849320016 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 106743 19955 SYDPTIENTF True PC9_epitope_Rep1 1185.51898384925 1185.51788993586 81.579 2 0.21030563002366423 0.00036105427849320016 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB'] 127553 18119 VQVPVPVTV True PC9_epitope_Rep6 936.5644179200399 936.56386496793 82.33 1 0.21030552299055244 0.00036105427849320016 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 113658 16248 TRDELEWKL True PC9_epitope_Rep1 1188.6138872935999 1188.61278993586 67.316 2 0.21030470369866858 0.00036105427849320016 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 89195 11263 REIFFPETA True H1975_Epitope_Rep1 1108.5553097883198 1108.5542099358602 48.299 2 0.21029684671604779 0.00036105427849320016 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 18792 7191 ELDSNLYR True H1975_Epitope_Rep3 1008.48762415132 1008.48652993586 32.636 2 0.21029289779994084 0.00036105427849320016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 47904 13677 IYVNPANTHQF True PC9_epitope_Rep1 1302.6356853673399 1302.63458993586 57.462 2 0.2102901185033404 0.00036105427849320016 0.9438714419765777 ['ENSG00000132716|ENST00000368074|DCAF8'] 89294 5506 RELPFTKSA True H1975_Epitope_Rep2 1047.57129420563 1047.57018993586 26.191 2 0.21027970467232246 0.00036105427849320016 0.9438714419765777 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENST00000506175.1_1_4:69188417-69195784:-|nuORF'] 29193 7012 FVALSTNTTK True NCI_RA007_Epitope_Rep1 1080.58152453616 1080.5804299358601 31.273 2 0.21027764061504303 0.00036105427849320016 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI'] 89859 20660 RFLNDPGHLLW True PC9_epitope_Rep5 1366.7146043943799 1366.7135099358602 84.522 2 0.21027483352815254 0.00036105427849320016 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 314 19293 AAIDWFDGK True PC9_epitope_Rep5 1021.4868958753299 1021.48578993586 79.254 2 0.21027469733435067 0.00036105427849320016 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 64209 19460 LQIEDFEARIA True PC9_epitope_Rep4 1303.67721582615 1303.67610993586 82.968 2 0.2102696524110625 0.00036105427849320016 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 71734 6013 MMDPNSTQRY True H1975_Epitope_Rep3 1241.51689275761 1241.51578993586 28.142 2 0.2102658653168571 0.00036105427849320016 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 84755 18693 QHIDFVTAI True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 77.27 2 0.21026432910524448 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44', 'nc|ENSG00000131725|Q5JSH3-3|WDR44'] 14955 15180 DYQALRTSI True PC9_epitope_Rep3 1065.54547338061 1065.54436993586 63.534 2 0.21026202204204106 0.00036105427849320016 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 107144 14139 SYMPTVSHL True PC9_epitope_Rep4 1033.49026700361 1033.4891699358602 62.288 2 0.21025886959350357 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 136305 9516 YGVSGYPTLK True NCI_RA007_Epitope_Rep1 1083.5600608155898 1083.5589699358602 41.009 2 0.21024943027419038 0.00036105427849320016 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 45204 17324 IRKPYIWEY True PC9_epitope_Rep1 1266.67609362734 1266.6749899358601 71.451 2 0.210226103718378 0.00036105427849320016 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 24155 18745 EYTDVLQKI True PC9_epitope_Rep1 1107.58119018299 1107.58008993586 76.89 2 0.21022402099702445 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 130799 8550 VVESAYEVIK True H1975_Epitope_Rep3 1135.6124903112698 1135.6113899358602 37.877 2 0.21022199760876 0.00036105427849320016 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 138154 19859 YQLPEILRT True PC9_epitope_Rep5 1131.6288090817498 1131.6277099358601 81.437 2 0.21022053348439806 0.00036105427849320016 0.9438714419765777 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 116597 20251 TYGEIFEKF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 82.945 2 0.21021187063336935 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 127353 15371 VQPRNWLLF True NCI_RA007_Epitope_Rep3 1171.6502132326698 1171.64910993586 68.021 2 0.2101943318091514 0.00036105427849320016 0.9438714419765777 ['ENSG00000060762|ENST00000360961|MPC1'] 109713 21545 THFNFAIVF True PC9_epitope_Rep2 1094.5549158654999 1094.55380993586 88.341 2 0.21018962185274867 0.00036105427849320016 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18'] 65303 7856 LSEKPTVTTVY True H1975_Epitope_Rep1 1236.6601687796801 1236.65906993586 35.17 2 0.21018406206481519 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105854|Q15165-3|PON2', 'nc|ENSG00000105854|Q15165-1|PON2', 'ENSG00000105854|ENST00000222572|PON2'] 111422 10203 TLKIPAM[Oxidation]TIAK True PC9_epitope_Rep3 1201.7104309111699 1201.70878490379 44.197 3 0.21016293504335898 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 140474 22379 YYIEGIENSVF True PC9_epitope_Rep1 1332.62378327096 1332.62268993586 90.896 2 0.2101619051007001 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 89324 8972 RELVKNWVP True NCI_RA007_Epitope_Rep4 1139.64512785223 1139.64402993586 41.347 2 0.21015597357280102 0.00036105427849320016 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 39972 11951 HQQSIPAVL True PC9_epitope_Rep4 991.5450794577898 991.5439899358599 53.759 2 0.21014529042306268 0.00036105427849320016 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 53957 13868 KYITQGQLLQF True NCI_RA007_Epitope_Rep2 1337.73433677945 1337.7332299358602 58.596 2 0.21014471020640332 0.00036105427849320016 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 10089 7539 AYVHM[Oxidation]VTHF True PC9_epitope_Rep4 1119.5171508382302 1119.51604993586 36.367 2 0.21014310887874807 0.00036105427849320016 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 131971 13260 VYGFLRNGF True NCI_RA007_Epitope_Rep5 1071.5501648382299 1071.5490699358602 57.684 2 0.21014245739968546 0.00036105427849320016 0.9438714419765777 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 139556 14038 YTMKEVLFY True H1975_Epitope_Rep2 1192.58383303528 1192.58272993586 59.149 2 0.21013870080792418 0.00036105427849320016 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'MDM2|p.H134Qfs*73|1|0.37|ENSG00000135679|chr12:68824406-68824409|CCTT/-|frameshift_variant', 'MDM2-NUP107|3|fusion', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2', 'nc|ENSG00000135679|Q00987-7|MDM2', 'ENST00000493419.1_1_12:69202221-69210726:+|nuORF'] 21685 17284 ERYFISHVL True PC9_epitope_Rep1 1162.61349337078 1162.6118549037901 71.3 3 0.21013531301721522 0.00036105427849320016 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 7603 7631 ASIHEAWTDGK True PC9_epitope_Rep5 1213.57275075761 1213.57111490379 34.299 3 0.21013356086488064 0.00036105427849320016 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 87432 5122 QTEERVQPEY True H1975_Epitope_Rep2 1277.58879474457 1277.58768993586 24.777 2 0.21013120719897962 0.00036105427849320016 0.9438714419765777 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 138496 20099 YRIESYWTY True PC9_epitope_Rep5 1279.5873381925899 1279.58624993586 82.357 2 0.21013004251966372 0.00036105427849320016 0.9438714419765777 ['ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 10916 8256 DATLTALDR True H1975_Epitope_Rep3 974.5032742154599 974.50216993586 36.742 2 0.2101278309283549 0.00036105427849320016 0.9438714419765777 ['ENSG00000084754|ENST00000380649|HADHA'] 99519 9933 SLESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep1 1204.5434251557197 1204.5423299358602 42.641 2 0.2101191069856259 0.00036105427849320016 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 84689 16887 QHFDSVMQL True PC9_epitope_Rep2 1103.5069796969099 1103.50588993586 70.202 2 0.2101178906320168 0.00036105427849320016 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 117408 7593 VADKVHLMY True H1975_Epitope_Rep3 1074.55320161334 1074.55210993586 34.188 2 0.21011361157388453 0.00036105427849320016 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 109606 16767 THDEDFVEL True PC9_epitope_Rep5 1103.4771190372699 1103.4760299358602 69.499 2 0.21011227909128177 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 117456 12858 VADTVARVL True PC9_epitope_Rep3 942.5498304850598 942.54872993586 54.476 2 0.2101048440208991 0.00036105427849320016 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 87090 12546 QSELVGQLY True H1975_Epitope_Rep3 1035.52367530687 1035.52256993586 53.457 2 0.2101016171198572 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 131800 11224 VYANGIRNI True PC9_epitope_Rep3 1018.5559784946599 1018.55488993586 48.181 2 0.21010146413520836 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 37515 14360 GYIESVQHI True PC9_epitope_Rep1 1044.52400966004 1044.52290993586 60.059 2 0.2100993882583352 0.00036105427849320016 0.9438714419765777 ['ENSG00000125871|ENST00000377710|MGME1'] 70042 12521 LYGRHFNYL True PC9_epitope_Rep4 1181.59817765981 1181.5970899358601 55.982 2 0.21009453150866536 0.00036105427849320016 0.9438714419765777 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 102790 14134 SQESKVLYL True PC9_epitope_Rep5 1065.57062549929 1065.5695299358601 59.378 2 0.21009165087662415 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 97712 18226 SHEEALSFVSL True PC9_epitope_Rep6 1217.5928174958499 1217.59172993586 82.748 2 0.21008656275208004 0.00036105427849320016 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 17031 9456 EGLTSIEEVTK True H1975_Epitope_Rep1 1204.61869789052 1204.6176099358602 41.289 2 0.2100862166696592 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 129131 4404 VTDALNATR True NCI_RA007_Epitope_Rep5 959.50360856863 959.50250993586 23.57 2 0.21008522866537668 0.00036105427849320016 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 98496 11015 SILEDYANYK True NCI_RA007_Epitope_Rep4 1214.5819184589798 1214.58082993586 49.237 2 0.2100819116995877 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 98111 11984 SIAIDTIINQK True NCI_RA007_Epitope_Rep1 1214.6870522338602 1214.6859499358602 50.601 2 0.2100812924390081 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 5962 16615 APIWLEHAA True PC9_epitope_Rep1 1006.5236157372199 1006.52250993586 68.736 2 0.21007880337464338 0.00036105427849320016 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 47525 16595 IYLPYLHEW True NCI_RA007_Epitope_Rep5 1232.62299542532 1232.62188993586 70.594 2 0.21007467881557929 0.00036105427849320016 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 109920 13217 THQTIVVQL True PC9_epitope_Rep4 1037.58694426977 1037.58584993586 58.736 2 0.21007352868687043 0.00036105427849320016 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 94643 17411 RYLDLFTSF True NCI_RA007_Epitope_Rep5 1160.5866099165999 1160.58550993586 73.754 2 0.21007108852713072 0.00036105427849320016 0.9438714419765777 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 48941 6402 KEYDVAVQA True NCI_RA007_Epitope_Rep4 1021.5080252427298 1021.50692993586 31.227 2 0.21007102179178047 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant'] 28364 11757 FSDIHDFEY True H1975_Epitope_Rep3 1171.48220441771 1171.48110993586 50.367 2 0.2100686245061292 0.00036105427849320016 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.E275*|1|0.26|ENSG00000196455|chr3:130735917-130735918|-/A|frameshift_variant'] 83057 21206 PYLFHVVTF True PC9_epitope_Rep2 1121.59096702105 1121.5898699358602 87.027 2 0.2100624247877071 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 106865 16024 SYIEHIFEI True NCI_RA007_Epitope_Rep4 1149.57062549929 1149.5695299358601 69.506 2 0.2100587607610696 0.00036105427849320016 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 1297 7212 AEDVLSGKVSA True H1975_Epitope_Rep1 1074.55570371114 1074.55460993586 32.754 2 0.21004622485084862 0.00036105427849320016 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 22208 7676 ETDHINQIGY True H1975_Epitope_Rep1 1188.54111627616 1188.54000993586 34.493 2 0.21004477082889186 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 132999 11003 VYVKDLSSF True NCI_RA007_Epitope_Rep4 1056.54916177872 1056.5480699358602 49.191 2 0.2100440824732152 0.00036105427849320016 0.9438714419765777 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 40467 8520 HSDQQVFEY True H1975_Epitope_Rep2 1151.4883524273098 1151.48777496793 37.727 1 0.2100390566173356 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'SNTB2-CIRH1A|1|fusion'] 136324 10004 YHADIYDKV True PC9_epitope_Rep1 1122.53457434374 1122.5329349037902 43.346 3 0.21003821697860156 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 110684 20132 TIYKDFVYI True PC9_epitope_Rep2 1160.6117620352798 1160.6106699358602 82.848 2 0.21003459509880967 0.00036105427849320016 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 28655 14656 FSSPHLVQV True PC9_epitope_Rep2 1012.5341804209198 1012.53308993586 61.64 2 0.2100213574545421 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 75459 17962 NQIEDNDDFQL True PC9_epitope_Rep6 1349.57353860325 1349.57244993586 81.72 2 0.21001294901361808 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 37944 7760 HEEMNYITA True H1975_Epitope_Rep3 1106.47025983502 1106.46916993586 34.833 2 0.2100060618574791 0.00036105427849320016 0.9438714419765777 ['ENST00000524546.5_1_8:42911603-42924800:+|nuORF', 'FNTA|p.Y166Sfs*6|1|0.25|ENSG00000168522|chr8:43069649-43069650|TA/-|frameshift_variant', 'ENST00000526755.5_1_8:42911676-42932640:+|nuORF', 'nc|ENSG00000168522|P49354-2|FNTA', 'ENSG00000168522|ENST00000302279|FNTA'] 114908 7834 TTEVHPELY True H1975_Epitope_Rep1 1087.5185899264297 1087.51748993586 35.086 2 0.21000421629614946 0.00036105427849320016 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 35244 5713 GSIEINIKK True NCI_RA007_Epitope_Rep4 1000.5916952970399 1000.59058993586 28.589 2 0.21000253716180964 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 109514 10271 THAAQQILL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 50.189 2 0.20999959891695527 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 114130 6426 TRSITNTTV True PC9_epitope_Rep1 991.52982331647 991.52872993586 29.523 2 0.20999751827722377 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 134398 14359 WTAELGIRHV True PC9_epitope_Rep1 1180.63529144452 1180.6336349037902 60.056 3 0.2099968260811498 0.00036105427849320016 0.9438714419765777 ['ENSG00000108106|ENST00000264552|UBE2S'] 31323 10414 GEAEKWAIP True H1975_Epitope_Rep3 999.5025459394698 999.50144993586 45.116 2 0.20999192207204515 0.00036105427849320016 0.9438714419765777 ['ENSG00000188636|ENST00000341255|RTL6'] 101104 21023 SLVDEFKEL True PC9_epitope_Rep5 1078.55464108198 1078.55354993586 85.922 2 0.20999058831960118 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 99532 6737 SLEVENQSLR True H1975_Epitope_Rep1 1173.59896550545 1173.5978699358602 30.954 2 0.20998648255727895 0.00036105427849320016 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000446006.1_1_7:64323382-64323847:+|nuORF', 'ENST00000527741.5_1_8:144663279-144663534:-|nuORF'] 75361 13431 NQDDSILKV True PC9_epitope_Rep1 1030.5294889632999 1030.52897496793 56.523 1 0.20998629376650677 0.00036105427849320016 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 5578 6561 [Acetylation]-ANRGPAYGLSR True NCI_RA007_Epitope_Rep5 1202.6156189453998 1202.6145299358602 31.899 2 0.2099860617361556 0.00036105427849320016 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 53107 4006 KSFDEQNVPK True NCI_RA007_Epitope_Rep5 1190.59315184902 1190.59150490379 21.803 3 0.20997792382060915 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 91304 18773 RLYPWGVVEV True PC9_epitope_Rep6 1216.6604435631998 1216.65934993586 84.851 2 0.20997748996619006 0.00036105427849320016 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 39701 9736 HPTWALKEA True PC9_epitope_Rep5 1051.5450794577898 1051.54398993586 42.42 2 0.20997653498065094 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 103348 13876 SQVEILQRV True PC9_epitope_Rep2 1070.6084079903399 1070.60730993586 58.656 2 0.2099747443563162 0.00036105427849320016 0.9438714419765777 ['ENSG00000117318|ENST00000374561|ID3'] 995 8004 AEAEFYRQV True H1975_Epitope_Rep1 1111.5298233164701 1111.5287299358602 35.731 2 0.2099715835119777 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENST00000442018.5_2_X:39911364-39913101:-|nuORF'] 44102 8714 ILMEHIHKL True PC9_epitope_Rep6 1132.64268532408 1132.64104490379 43.374 3 0.20996958063179444 0.00036105427849320016 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 24347 8419 FADQEVRSL True H1975_Epitope_Rep3 1063.52982331647 1063.5287299358602 37.367 2 0.209945062435188 0.00036105427849320016 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 47408 14908 IYIKHPHLF True PC9_epitope_Rep5 1166.66004964038 1166.6584049037901 62.348 3 0.2099449372458695 0.00036105427849320016 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 72695 12096 MYLKTVDKF True PC9_epitope_Rep2 1143.5998174525898 1143.59818490379 51.836 3 0.20993531424695858 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 6653 10728 AQAEVYKEL True PC9_epitope_Rep5 1049.53932537101 1049.53822993586 46.258 2 0.20993085470753786 0.00036105427849320016 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 8236 14248 ATIIDILTK True NCI_RA007_Epitope_Rep3 986.60119735158 986.6006449679301 63.356 1 0.20990581544392248 0.00036105427849320016 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 132418 5958 VYNNNSSRF True PC9_epitope_Rep5 1099.50467119779 1099.50356993586 27.912 2 0.2098931608029761 0.00036105427849320016 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant'] 73181 5355 NEEEIRANVA True H1975_Epitope_Rep3 1143.55201531303 1143.55090993586 25.666 2 0.20987912770126263 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 116522 15955 TYDYNFHSF True PC9_epitope_Rep6 1192.48253877088 1192.4814499358602 73.665 2 0.2098759960506624 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 140798 11830 YYSHLEGARF True PC9_epitope_Rep5 1241.5829215184897 1241.58127490379 50.501 3 0.20987251918852412 0.00036105427849320016 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 109587 10211 THDDSHLVSL True PC9_epitope_Rep5 1122.5305515924601 1122.5294499358602 44.264 2 0.20986048524077813 0.00036105427849320016 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 25317 12916 FEELNM[Oxidation]DLFR True H1975_Epitope_Rep3 1328.6070880414397 1328.6059899358602 54.909 2 0.20985727607854984 0.00036105427849320016 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 77432 15659 NYNEKIYEL True PC9_epitope_Rep3 1184.5713537752797 1184.5702499358601 65.377 2 0.20985663370558327 0.00036105427849320016 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 105531 11210 SVDPHGFISY True H1975_Epitope_Rep3 1120.5189242796 1120.5178299358602 48.219 2 0.2098550275515789 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 39900 17976 HQLALISQL True PC9_epitope_Rep4 1021.59202965021 1021.59092993586 77.197 2 0.20985261411585282 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 44983 18445 IQIMKVEEI True PC9_epitope_Rep5 1101.61038213629 1101.60928993586 75.97 2 0.20984790370813763 0.00036105427849320016 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 126688 15458 VPRPAVLDPAL True PC9_epitope_Rep6 1146.67609362734 1146.6749899358601 71.617 2 0.20984714625265646 0.00036105427849320016 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 49009 7797 KFIDTTSKF True NCI_RA007_Epitope_Rep1 1085.57571087973 1085.57460993586 34.319 2 0.20984169966847124 0.00036105427849320016 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 93963 7657 RVLTSVFTK True NCI_RA007_Epitope_Rep4 1049.62332977849 1049.62222993586 36.108 2 0.20983493054258537 0.00036105427849320016 0.9438714419765777 ['ENSG00000178573|ENST00000326043|MAF'] 85748 17996 QLVEDLDRI True PC9_epitope_Rep4 1099.5873381925899 1099.58624993586 77.279 2 0.2098345053482648 0.00036105427849320016 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-23|FGFR2', 'nc|ENSG00000066468|P21802-15|FGFR2', 'ENST00000604236.5_1_10:123239373-123278228:-|nuORF', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'BAG4-FGFR1|1|fusion', 'BAG4-FGFR1|2|fusion', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-3|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'ENST00000531196.5_1_8:38271148-38271684:-|nuORF', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion'] 47801 11124 IYQYIQSRF True NCI_RA007_Epitope_Rep4 1216.6240580544797 1216.62296993586 49.663 2 0.20982660644037343 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000105204|Q9Y463-2|DYRK1B', 'nc|ENSG00000105204|Q9Y463-3|DYRK1B', 'ENSG00000105204|ENST00000323039|DYRK1B', 'nc|ENSG00000157540|Q13627-4|DYRK1A', 'nc|ENSG00000157540|Q13627-3|DYRK1A', 'nc|ENSG00000157540|Q13627-5|DYRK1A', 'ENSG00000157540|ENST00000647188|DYRK1A', 'nc|ENSG00000157540|Q13627|DYRK1A'] 43047 10788 IGGIGTVPVGR True PC9_epitope_Rep6 1024.6029286870798 1024.60182993586 52.331 2 0.20980994368863665 0.00036105427849320016 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 68092 8110 LTPDETYVPK True NCI_RA007_Epitope_Rep1 1161.5917548666898 1161.59064993586 35.546 2 0.20980816783421616 0.00036105427849320016 0.9438714419765777 ['CON__P02769'] 115291 17258 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54370993586 71.844 2 0.2097963611532702 0.00036105427849320016 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 33213 13593 GLADASLLKKV True PC9_epitope_Rep4 1113.6757592741699 1113.67466993586 60.178 2 0.2097958340362416 0.00036105427849320016 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10'] 85008 9797 QIFNGTFVK True NCI_RA007_Epitope_Rep3 1052.5654805492 1052.5643899358602 45.599 2 0.20979294871068402 0.00036105427849320016 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 131830 12360 VYAQVARLF True NCI_RA007_Epitope_Rep3 1065.5971150306498 1065.5960099358601 55.813 2 0.20978781513913877 0.00036105427849320016 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 103411 19887 SQYGEIVNI True PC9_epitope_Rep1 1021.5080252427299 1021.50692993586 81.314 2 0.20978547629141311 0.00036105427849320016 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 140700 17169 YYQEYPM[Oxidation]SI True PC9_epitope_Rep1 1208.5059770178398 1208.5048699358601 70.861 2 0.2097839800394216 0.00036105427849320016 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 130060 5207 VTQFEATDAR True H1975_Epitope_Rep3 1136.5462016565998 1136.5451099358602 25.12 2 0.20978088509129078 0.00036105427849320016 0.9438714419765777 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000274487|A6NEC2|NPEPPSL1'] 46241 8827 ITDSAGHILY True H1975_Epitope_Rep3 1088.55022440788 1088.54912993586 38.96 2 0.20977764453497402 0.00036105427849320016 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 73519 14266 NFGIGQDIQPK True PC9_epitope_Rep3 1215.62478633047 1215.62368993586 59.958 2 0.20977009898514845 0.00036105427849320016 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 54150 20184 KYNDNFFGL True PC9_epitope_Rep2 1116.5240096600398 1116.52290993586 83.052 2 0.20976864304391116 0.00036105427849320016 0.9438714419765777 ['ENSG00000012963|ENST00000013070|UBR7'] 93697 18151 RTLETLIRL True PC9_epitope_Rep5 1113.6869926642098 1113.6858899358601 74.826 2 0.20976621418467944 0.00036105427849320016 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 115759 14282 TVLQKMNEI True PC9_epitope_Rep1 1074.57433098074 1074.5732299358601 59.761 2 0.209739678897115 0.00036105427849320016 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 132848 10662 VYTPVASRQSL True PC9_epitope_Rep2 1219.65608645875 1219.6549899358602 46.324 2 0.20973790023575808 0.00036105427849320016 0.9438714419765777 ['ENSG00000070950|ENST00000264926|RAD18', 'RAD18|p.D408Tfs*40|2|0.17|ENSG00000070950|chr3:8898994-8898994|C/-|frameshift_variant', 'RAD18|p.E392Kfs*4|1|0.11|ENSG00000070950|chr3:8899042-8899042|C/-|frameshift_variant'] 104072 7760 SRTSIQSEL True PC9_epitope_Rep4 1019.52473793603 1019.52364993586 37.24 2 0.20973631946102844 0.00036105427849320016 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 77356 22503 NYLLYVSNF True PC9_epitope_Rep3 1131.5600608155898 1131.5589699358602 91.833 2 0.2097231729771344 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 84071 9145 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 40.166 2 0.20972316109233044 0.00036105427849320016 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 77310 14741 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.6075749679298 61.52 1 0.20972011069372135 0.00036105427849320016 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 94702 9113 RYLEQLHQL True NCI_RA007_Epitope_Rep2 1198.64585612822 1198.64474993586 40.053 2 0.2097184463486791 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 48973 19229 KFAEEFYSF True PC9_epitope_Rep4 1166.5284263341398 1166.52732993586 82.064 2 0.20971676884153087 0.00036105427849320016 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 82153 16919 PTDYADIMMGY True H1975_Epitope_Rep2 1275.51516142211 1275.51406993586 70.326 2 0.20971464375756332 0.00036105427849320016 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 82363 6678 PTTLTDEEINR True H1975_Epitope_Rep3 1287.6306595565497 1287.6295699358602 30.642 2 0.20970769539638875 0.00036105427849320016 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 107002 9816 SYLIQHQRF True PC9_epitope_Rep2 1190.6196413803802 1190.61799490379 43.093 3 0.20969400392646553 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000197951|Q9NQZ8|ZNF71', 'ENSG00000197951|ENST00000599599|ZNF71'] 17893 5093 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 24.672 2 0.20968680750744956 0.0004555289830315454 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 96562 18466 SELPSPLITF True H1975_Epitope_Rep2 1102.5910265906998 1102.58992993586 76.631 2 0.20968415775421329 0.0004555289830315454 0.9438714419765777 ['ZNF280B|p.H460Qfs*8|1|0.36|ENSG00000275004|chr22:22488010-22488019|GGAACACTGG/-|frameshift_variant', 'ENSG00000275004|ENST00000626650|ZNF280B'] 125477 10960 VLVDQTTGLSR True PC9_epitope_Rep1 1187.65100107831 1187.64990993586 47.045 2 0.20968336801597204 0.0004555289830315454 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 17591 17475 EHLQVITTL True PC9_epitope_Rep3 1052.5866099166 1052.58550993586 72.396 2 0.20968246607282948 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 2537 13023 AEQWNVNYV True H1975_Epitope_Rep2 1121.51417325233 1121.5130699358601 55.212 2 0.2096817204860342 0.0004555289830315454 0.9438714419765777 ['ENSG00000006451|ENST00000005257|RALA'] 26774 9724 FLDQNLQKY True H1975_Epitope_Rep1 1167.59242357303 1167.5913299358601 42.33 2 0.20967906119697904 0.0004555289830315454 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 17520 12780 EHINEGETAML True PC9_epitope_Rep3 1242.55505208814 1242.5539499358601 54.18 2 0.20967169842325317 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 37575 17852 GYSEHFVEF True PC9_epitope_Rep2 1113.47672511445 1113.47562993586 73.968 2 0.2096711803081076 0.0004555289830315454 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 21932 7270 ESIEIINK True H1975_Epitope_Rep3 944.51786165044 944.51676993586 32.938 2 0.2096689222611079 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000065154|P04181-2|OAT', 'ENSG00000065154|ENST00000368845|OAT'] 75338 7870 NQADKAINTAV True PC9_epitope_Rep1 1143.5884008217502 1143.58730993586 35.097 2 0.20966752009640122 0.0004555289830315454 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 89375 9072 REMEENFAVEA True H1975_Epitope_Rep1 1323.57651580871 1323.57540993586 39.8 2 0.2096499360633649 0.0004555289830315454 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 69835 13158 LYADVGGKQF True PC9_epitope_Rep2 1096.55530978832 1096.5542099358602 55.883 2 0.2096478307378984 0.0004555289830315454 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 117462 10632 VADTVARVL True PC9_epitope_Rep6 942.5498304850598 942.54872993586 51.713 2 0.20964487731836173 0.0004555289830315454 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 98830 11318 SITSVFITK True NCI_RA007_Epitope_Rep2 994.5698972233 994.56880993586 48.614 2 0.20964428851029632 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 49369 20819 KIIDEDGLLNL True PC9_epitope_Rep5 1241.68671788069 1241.68562993586 85.129 2 0.20964399080682966 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 117214 19077 TYTSYLDKF True PC9_epitope_Rep3 1136.5389910178399 1136.5378899358602 78.602 2 0.20964076963791464 0.0004555289830315454 0.9438714419765777 ['ENSG00000069956|ENST00000261845|MAPK6'] 14247 4919 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 23.214 2 0.2096284097942245 0.0004555289830315454 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 70046 17068 LYGRNFNYL True PC9_epitope_Rep2 1158.5821932425 1158.58108993586 70.904 2 0.20962702620639506 0.0004555289830315454 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 43744 17591 IITKDLFQV True PC9_epitope_Rep6 1075.62774645259 1075.62664993586 80.306 2 0.20962144876969732 0.0004555289830315454 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 37968 7472 HEFLHEVPAA True H1975_Epitope_Rep2 1148.56145779792 1148.56036993586 33.688 2 0.20961694871952735 0.0004555289830315454 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 78914 16952 PFAKPLPTF True PC9_epitope_Rep4 1016.5695033004799 1016.56840993586 73.196 2 0.20961434420237868 0.0004555289830315454 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 116992 15764 TYPYLQHEI True PC9_epitope_Rep5 1162.5658744720201 1162.56476993586 65.63 2 0.20961380427683646 0.0004555289830315454 0.9438714419765777 ['PMEPA1|p.S209Qfs*3|1|0.15|ENSG00000124225|chr20:57652292-57652293|-/G|frameshift_variant', 'nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 96754 8961 SEQLDQPISA True H1975_Epitope_Rep3 1086.51931820242 1086.5187749679299 39.464 1 0.20961246454101484 0.0004555289830315454 0.9438714419765777 ['ENST00000462438.1_1_20:55948707-55953152:+|nuORF', 'ENSG00000101146|ENST00000395841|RAE1'] 47463 23676 IYIWDLNNF True PC9_epitope_Rep1 1196.5866099165999 1196.58550993586 95.861 2 0.20961232255866355 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 103945 18707 SRPPLLGF True PC9_epitope_Rep5 885.50723739709 885.50614993586 76.975 2 0.20961045657013738 0.0004555289830315454 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 40657 10972 HTILIVEKV True PC9_epitope_Rep4 1050.6437308699 1050.6426299358602 49.976 2 0.2096053413102812 0.0004555289830315454 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF'] 135608 8715 YEEMGIKPP True H1975_Epitope_Rep1 1062.5055827145798 1062.5044899358602 38.45 2 0.20960228247197732 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 67128 15173 LTDDHVQFLIY True H1975_Epitope_Rep2 1362.6819668534201 1362.68086993586 63.519 2 0.20959468182558846 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000112062|Q16539-5|MAPK14', 'nc|ENSG00000112062|Q16539-3|MAPK14', 'nc|ENSG00000112062|Q16539-4|MAPK14', 'nc|ENSG00000112062|Q16539-2|MAPK14', 'ENSG00000112062|ENST00000229794|MAPK14'] 48589 5731 KEIEELQSQA True NCI_RA007_Epitope_Rep5 1173.58773211541 1173.5866299358602 28.731 2 0.2095882257804563 0.0004555289830315454 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 23744 23777 EYIQFVPLL True PC9_epitope_Rep1 1120.6168474157198 1120.61574993586 96.254 2 0.20958519770796843 0.0004555289830315454 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 106696 20726 SYANYFIRL True PC9_epitope_Rep5 1145.58694426977 1145.58584993586 84.78 2 0.209583432403673 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 23651 20877 EYGKFFVTL True PC9_epitope_Rep5 1102.5698972233 1102.5688099358601 85.356 2 0.20958255456597477 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 94620 20898 RYLDEINLL True PC9_epitope_Rep3 1147.62372370131 1147.62262993586 85.659 2 0.20958250070189152 0.0004555289830315454 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 21472 5542 ERQPGAASL True PC9_epitope_Rep1 927.4773938207899 927.47628993586 26.147 2 0.20958015926298665 0.0004555289830315454 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 134906 11898 YADPTKRLEL True PC9_epitope_Rep4 1204.6451874218799 1204.6435349037902 53.541 3 0.20957861996740662 0.0004555289830315454 0.9438714419765777 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'GTF3C5|p.P179Rfs*26|1|0.09|ENSG00000148308|chr9:133043887-133043887|C/-|frameshift_variant'] 108492 4634 TEEYPNKPP True H1975_Epitope_Rep3 1073.5029398622898 1073.50184993586 22.946 2 0.209577926988747 0.0004555289830315454 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A'] 7208 15223 ARDFTVSAL True PC9_epitope_Rep5 978.5134449763399 978.51234993586 63.564 2 0.2095771631292952 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 53505 14650 KVLNELTQL True PC9_epitope_Rep6 1056.6179100448799 1056.6168099358601 68.272 2 0.20957685587452618 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 104988 8890 STIEYVIQR True NCI_RA007_Epitope_Rep4 1107.59242357303 1107.5913299358601 41.021 2 0.20957570290847555 0.0004555289830315454 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 24211 15453 EYVEKFYRI True PC9_epitope_Rep5 1245.6393737654498 1245.63772490379 64.451 3 0.20957332629829434 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 53235 10600 KTEIMSPLY True H1975_Epitope_Rep2 1080.5525329069999 1080.5514299358601 45.795 2 0.2095492197997941 0.0004555289830315454 0.9438714419765777 ['ENSG00000108592|ENST00000427159|FTSJ3', 'ENST00000583202.5_1_17:61898213-61899202:-|nuORF'] 87414 7659 QTDTLQNDY True H1975_Epitope_Rep2 1096.4672826295598 1096.46618993586 34.414 2 0.20954809602592603 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 140750 19423 YYQRGSSMVLF True PC9_epitope_Rep5 1349.64380752289 1349.64270993586 79.76 2 0.2095365951041231 0.0004555289830315454 0.9438714419765777 ['ENSG00000171867|ENST00000379440|PRNP'] 105889 21086 SVLDDKLVFV True PC9_epitope_Rep5 1133.63322575585 1133.6321299358601 86.17 2 0.2095355788714989 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 36412 20931 GVIDLIFEKA True PC9_epitope_Rep4 1103.62266107215 1103.6215699358602 88.671 2 0.20953416565331678 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 8618 15912 AVALERTFVGA True PC9_epitope_Rep1 1132.62405805448 1132.62296993586 66.016 2 0.20953240343394466 0.0004555289830315454 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN'] 11628 5421 DHASIQM[Oxidation]NV True PC9_epitope_Rep4 1029.45494450449 1029.45384993586 27.584 2 0.2095269798756293 0.0004555289830315454 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 132071 7255 VYIKHPVSL True NCI_RA007_Epitope_Rep1 1054.61751612206 1054.61640993586 32.211 2 0.20952080480511429 0.0004555289830315454 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 111329 18823 TLIDLPGITKV True PC9_epitope_Rep6 1168.70672504928 1168.70562993586 85.045 2 0.20951729576895992 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3'] 61594 19619 LLGPRLVLA True PC9_epitope_Rep5 950.6276868829399 950.62658993586 80.517 2 0.2095166002986729 0.0004555289830315454 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 9143 12481 AVLYQPLFDK True NCI_RA007_Epitope_Rep5 1192.6492101731599 1192.64810993586 54.665 2 0.2095137831195348 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 77226 18848 NYIEKVVAI True PC9_epitope_Rep1 1047.59644632431 1047.5953499358602 77.284 2 0.20951149772024463 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 8200 12595 ATGSWDSFLK True NCI_RA007_Epitope_Rep4 1110.53457434374 1110.53346993586 55.467 2 0.209508105559045 0.0004555289830315454 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 7213 12921 ARDFTVSAM True PC9_epitope_Rep3 996.4698659121999 996.46876993586 54.723 2 0.2095013697182515 0.0004555289830315454 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 76981 4510 NVSDAVAQSTR True H1975_Epitope_Rep3 1146.5629143499002 1146.56180993586 22.467 2 0.20949758340485095 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 25983 14582 FGYQFTQQGPR True PC9_epitope_Rep1 1327.6309343400699 1327.62982993586 60.913 2 0.20949054287883356 0.0004555289830315454 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 61246 20925 LLDRFLATV True PC9_epitope_Rep1 1046.61243074162 1046.61132993586 85.309 2 0.2094875855625219 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 25248 11728 FEDENFILK True H1975_Epitope_Rep3 1153.5655401188499 1153.56444993586 50.252 2 0.20947822499229496 0.0004555289830315454 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 139848 21728 YVDPLDPSF True PC9_epitope_Rep1 1051.48622716899 1051.4851299358602 88.408 2 0.20947816909283926 0.0004555289830315454 0.9438714419765777 ['ENST00000472446.1_1_17:17412858-17494940:-|nuORF', 'nc|ENSG00000133027|Q9UBM1|PEMT', 'nc|ENSG00000133027|Q9UBM1-3|PEMT', 'ENSG00000133027|ENST00000255389|PEMT'] 4426 21572 AIVDLIHDI True PC9_epitope_Rep5 1007.5651461960299 1007.56404993586 88.016 2 0.20947611676805988 0.0004555289830315454 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 124368 10598 VLDVETGNEY True H1975_Epitope_Rep3 1137.51898384925 1137.51847496793 45.836 1 0.20947035662737049 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12'] 73889 7180 NHHLQETSF True PC9_epitope_Rep3 1111.50467119779 1111.50356993586 32.63 2 0.20946430831473675 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 72273 14311 MSDSYLPSYY True H1975_Epitope_Rep1 1224.5008912569601 1224.49978993586 60.234 2 0.2094541655554509 0.0004555289830315454 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 137223 15016 YLEQLILKY True H1975_Epitope_Rep2 1181.6696112645698 1181.6685099358601 62.91 2 0.20945102774781096 0.0004555289830315454 0.9438714419765777 ['ENSG00000169251|ENST00000351193|NMD3', 'NMD3|p.E344Kfs*10|1|0.18|ENSG00000169251|chr3:161246345-161246345|G/-|frameshift_variant', 'ENST00000478160.1_1_3:160945095-160953023:+|nuORF', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 91288 19457 RLYDGLFKVI True PC9_epitope_Rep4 1222.70739375562 1222.70628993586 82.956 2 0.20943623288188018 0.0004555289830315454 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 14981 20020 DYSSILQKF True PC9_epitope_Rep4 1099.55497543515 1099.5538699358601 85.142 2 0.20943607817704785 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 23954 19482 EYNSDLHQFF True PC9_epitope_Rep2 1298.5567663402996 1298.5556699358601 80.318 2 0.20943584022514566 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 95343 7737 SAGPAIKL True H1975_Epitope_Rep2 755.45413919507 755.45304993586 34.712 2 0.20943515858157727 0.0004555289830315454 0.9438714419765777 ['ENSG00000166897|ENST00000402918|ELFN2'] 108266 10430 TEAPVPVSV True H1975_Epitope_Rep1 897.4807478657299 897.4801949679301 45.073 1 0.20943183094040482 0.0004555289830315454 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 53096 8190 KSDVHLNFY True H1975_Epitope_Rep1 1121.55055876105 1121.54946993586 36.443 2 0.20942753446227128 0.0004555289830315454 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 85743 19280 QLVDIIEKV True PC9_epitope_Rep4 1055.62266107215 1055.6215699358602 82.266 2 0.2094262399148167 0.0004555289830315454 0.9438714419765777 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 116984 14216 TYPQLEGFKF True NCI_RA007_Epitope_Rep3 1228.6128246644396 1228.61172993586 63.226 2 0.20942152187780938 0.0004555289830315454 0.9438714419765777 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 38151 6314 HERAIDFSP True NCI_RA007_Epitope_Rep3 1070.5145076055 1070.5134099358602 31.838 2 0.20941697950150942 0.0004555289830315454 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 5026 9136 ALLEVVQSGGK True H1975_Epitope_Rep3 1099.62372370131 1099.62262993586 40.131 2 0.20941409278930992 0.0004555289830315454 0.9438714419765777 ['ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000101182|O14818-2|PSMA7', 'nc|ENSG00000154611|Q8TAA3-2|PSMA8', 'ENSG00000154611|ENST00000415576|PSMA8', 'nc|ENSG00000154611|Q8TAA3|PSMA8', 'ENST00000484488.5_1_20:60711915-60714832:-|nuORF'] 72355 8564 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 37.894 2 0.20941371869604306 0.0004555289830315454 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 29325 10703 FVDPYPVNKY True H1975_Epitope_Rep2 1240.6128246644398 1240.61172993586 46.193 2 0.20940992599296002 0.0004555289830315454 0.9438714419765777 ['ENSG00000174010|ENST00000328046|KLHL15'] 70396 22738 LYQFNPAFF True PC9_epitope_Rep2 1145.5545815123298 1145.5534899358602 92.958 2 0.20940980120032557 0.0004555289830315454 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 136744 10357 YINPDLALEEK True H1975_Epitope_Rep3 1303.6659824361097 1303.6648899358602 44.893 2 0.20940029543069225 0.0004555289830315454 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1', 'ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 53705 18397 KYDEIFYNL True PC9_epitope_Rep6 1203.5811901829898 1203.58008993586 83.41 2 0.20939615254031843 0.0004555289830315454 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 30495 4797 GAGTDDHTLIR True NCI_RA007_Epitope_Rep2 1154.5679997303398 1154.56636490379 23.29 3 0.2093815779033191 0.0004555289830315454 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 134525 17625 WVDVAHLVLY True H1975_Epitope_Rep2 1213.6495445263301 1213.64844993586 73.111 2 0.20938083309548638 0.0004555289830315454 0.9438714419765777 ['ENSG00000112511|ENST00000374516|PHF1', 'nc|ENSG00000112511|O43189-2|PHF1'] 92110 10544 RPYQPLPEA True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 45.448 2 0.20937383378089708 0.0004555289830315454 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 117461 10377 VADTVARVL True PC9_epitope_Rep6 942.5498304850598 942.54872993586 50.639 2 0.20937184124081598 0.0004555289830315454 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 8745 15320 AVDSLVPIGR True PC9_epitope_Rep1 1025.58694426977 1025.58584993586 63.748 2 0.2093708498848516 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 76486 10816 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4603699358602 46.633 2 0.20937074273371772 0.0004555289830315454 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 33787 15056 GLSTEGIYRV True PC9_epitope_Rep3 1093.57677350889 1093.57566993586 63.043 2 0.20936217537350166 0.0004555289830315454 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 60373 19230 LIIDENGVHEL True PC9_epitope_Rep5 1250.65066672514 1250.6495699358602 79.008 2 0.20935977371191528 0.0004555289830315454 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 118996 16557 VEFLEPLEA True H1975_Epitope_Rep2 1045.5331773614098 1045.53267496793 68.912 1 0.20935939224494798 0.0004555289830315454 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 94126 20435 RWFDKSFTF True PC9_epitope_Rep5 1232.59784330664 1232.5961849037901 83.64 3 0.20934541109351304 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 75388 16606 NQEDFFQRV True PC9_epitope_Rep1 1181.5465360097699 1181.54542993586 68.7 2 0.2093312137006956 0.0004555289830315454 0.9438714419765777 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF'] 117036 7908 TYQEVAQKF True NCI_RA007_Epitope_Rep4 1112.5502244078798 1112.54912993586 37.156 2 0.2093266933265034 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 87331 19498 QTAPEEAFIKL True PC9_epitope_Rep3 1245.6605031328497 1245.6594099358601 80.23 2 0.2093246073108162 0.0004555289830315454 0.9438714419765777 ['TTC30B|p.A478Cfs*6|1|0.11|ENSG00000196659|chr2:177551332-177551333|-/A|frameshift_variant', 'TTC30A|p.A478Cfs*6|1|0.12|ENSG00000197557|chr2:177617270-177617271|-/A|frameshift_variant', 'ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 139275 5079 YTDHQNSSSYY True H1975_Epitope_Rep1 1363.5316737912701 1363.53056993586 24.608 2 0.2093164974474414 0.0004555289830315454 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 128516 9767 VSGGLEVLAEK True NCI_RA007_Epitope_Rep1 1100.607739284 1100.60664993586 41.994 2 0.20930762539525025 0.0004555289830315454 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF', 'nc|ENSG00000248546|O43423|ANP32CP'] 24203 14352 EYVEKFYRI True PC9_epitope_Rep2 1245.6393737654498 1245.63772490379 60.466 3 0.20929911934760267 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 102750 2615 SQEGRPVQV True PC9_epitope_Rep2 998.5145076054997 998.51340993586 14.715 2 0.2092964114482055 0.0004555289830315454 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 86742 19845 QRLETILSL True PC9_epitope_Rep2 1071.62880908175 1071.6277099358601 81.725 2 0.20929622619630284 0.0004555289830315454 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 2536 5286 AEQVVQGMKEA True H1975_Epitope_Rep2 1188.58087291316 1188.5797699358602 25.393 2 0.20929602285402613 0.0004555289830315454 0.9438714419765777 ['ENSG00000117862|ENST00000371626|TXNDC12'] 140730 15688 YYQHIVTTL True PC9_epitope_Rep3 1136.5866099166 1136.58550993586 65.487 2 0.20929048528312755 0.0004555289830315454 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 77465 15429 NYPETLGRLLI True NCI_RA007_Epitope_Rep4 1287.7186867153098 1287.7175899358601 67.016 2 0.20928047095032212 0.0004555289830315454 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 41064 15888 HYKPTPLYF True PC9_epitope_Rep3 1164.59678067748 1164.59568993586 66.262 2 0.2092717714773297 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 46235 9041 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 39.729 2 0.2092676576516062 0.0004555289830315454 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 113198 8031 TQDPTVTRL True PC9_epitope_Rep2 1029.5454733806098 1029.54436993586 36.253 2 0.2092635528759176 0.0004555289830315454 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 73852 13768 NHFMDNTTL True PC9_epitope_Rep5 1091.47059418819 1091.46948993586 57.98 2 0.20925158837934146 0.0004555289830315454 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 11779 8282 DHIKDSFHSL True PC9_epitope_Rep2 1197.57783613805 1197.57619490379 37.217 3 0.20924886540658766 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 131872 19890 VYDPSLKTLL True PC9_epitope_Rep1 1147.64887581999 1147.6477699358602 81.325 2 0.20923862737818177 0.0004555289830315454 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 35135 7647 GRYAGEESL True PC9_epitope_Rep3 980.4563240230399 980.45522993586 34.414 2 0.20921787798545138 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 48843 9140 KESDIYIVA True H1975_Epitope_Rep2 1036.54407639828 1036.5429699358601 40.108 2 0.20921669682347294 0.0004555289830315454 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 104841 7975 STELNHLGY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 35.622 2 0.20921629262881997 0.0004555289830315454 0.9438714419765777 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 106993 13753 SYLESFYHM True NCI_RA007_Epitope_Rep3 1175.49574630687 1175.49464993586 61.422 2 0.20921601615271454 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 30076 21168 FYMDTSHLF True PC9_epitope_Rep1 1159.5008316873098 1159.4997299358602 86.256 2 0.20921588593135332 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 140598 16719 YYLTPDGQRF True PC9_epitope_Rep5 1258.59823722946 1258.5971499358602 69.317 2 0.20919797393254955 0.0004555289830315454 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 24190 20321 EYTRALFLL True PC9_epitope_Rep4 1124.62299542532 1124.62188993586 86.307 2 0.20919641294588856 0.0004555289830315454 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2'] 117909 14936 VAQLEQVYIR True PC9_epitope_Rep3 1217.6768219033297 1217.67572993586 62.585 2 0.2091953558390217 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 132784 19186 VYSQFITQL True PC9_epitope_Rep6 1097.5757108797297 1097.57460993586 86.451 2 0.20919416827077714 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 108502 17220 TEFLSFM[Oxidation]NTEL True H1975_Epitope_Rep1 1346.6064193350996 1346.60532993586 71.696 2 0.20918604974433838 0.0004555289830315454 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 28183 18708 FRPEWQSVY True PC9_epitope_Rep1 1210.57710786206 1210.5760099358602 76.749 2 0.20918100794098515 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2', 'ENST00000512755.1_1_13:33101488-33110480:-|nuORF'] 15000 20707 DYVEGLRVF True PC9_epitope_Rep5 1096.5553097883198 1096.5542099358602 84.707 2 0.20917515620054225 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 114218 9767 TRVSQINTL True PC9_epitope_Rep1 1030.5771078620598 1030.5760099358602 42.43 2 0.20916575365493384 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 105173 3680 STM[Oxidation]STNGIPR True NCI_RA007_Epitope_Rep4 1078.50770835334 1078.50660993586 20.265 2 0.209161817234458 0.0004555289830315454 0.9438714419765777 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 127635 7908 VRDQTELRL True PC9_epitope_Rep2 1128.62512068364 1128.6234749037899 35.784 3 0.20915980161630926 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1', 'IRAK1|p.P308Hfs*45|1|0.26|ENSG00000184216|chrX:154017054-154017054|G/-|frameshift_variant'] 70822 4179 MEEQVTKAEA True H1975_Epitope_Rep2 1134.5226893307 1134.5215899358602 21.183 2 0.20915451210582311 0.0004555289830315454 0.9438714419765777 ['ENSG00000186222|ENST00000320776|BLOC1S4'] 87396 11319 QTDPVTLQY True H1975_Epitope_Rep1 1063.51858992643 1063.51807496793 48.517 1 0.20914454031590876 0.0004555289830315454 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 119793 7673 VEVEGDNRYIA True H1975_Epitope_Rep3 1263.6095301891498 1263.6084299358602 34.498 2 0.20913820907209418 0.0004555289830315454 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 59736 5487 LGVIEDHSNR True PC9_epitope_Rep5 1138.5730851107799 1138.57144490379 26.116 3 0.20912684777179305 0.0004555289830315454 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 70116 20493 LYIVHPTMF True PC9_epitope_Rep1 1119.57868808519 1119.57758993586 83.638 2 0.20912267315717495 0.0004555289830315454 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 49367 20807 KIIDEDGLLNL True PC9_epitope_Rep3 1241.68671788069 1241.68562993586 85.306 2 0.20910266067600847 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 113876 13834 TRGQIQVIL True PC9_epitope_Rep4 1026.6185787512197 1026.61748993586 61.11 2 0.20907520530276688 0.0004555289830315454 0.9438714419765777 ['chr17:78182682-78183754|494|18.45|0.73|4.66|-|ENST00000586613|TK1,TK1', 'ENSG00000167900|ENST00000301634|TK1'] 42800 13851 IFIKDSNSL True PC9_epitope_Rep1 1035.56006081559 1035.5589699358602 58.119 2 0.2090751623334806 0.0004555289830315454 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 132083 10989 VYIKHPVSL True PC9_epitope_Rep3 1054.61751612206 1054.61640993586 47.254 2 0.2090746674577348 0.0004555289830315454 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 32950 5177 GISEETTTGVH True NCI_RA007_Epitope_Rep1 1129.52513185885 1129.5240299358602 24.219 2 0.20907434388286833 0.0004555289830315454 0.9438714419765777 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 94883 19443 RYPAIIYNI True PC9_epitope_Rep2 1121.62332977849 1121.62222993586 80.167 2 0.20905883477581272 0.0004555289830315454 0.9438714419765777 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000507477.1_1_17:47780142-47780651:-|nuORF', 'ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1', 'SPOP-SLC35B1|1|fusion'] 90332 7766 RIGEPLVLK True NCI_RA007_Epitope_Rep4 1023.6440652230699 1023.6429699358599 36.553 2 0.20904851813837358 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000204305|Q15109-3|AGER', 'nc|ENSG00000204305|Q15109-4|AGER', 'nc|ENSG00000204305|Q15109-10|AGER', 'nc|ENSG00000204305|Q15109-7|AGER', 'ENSG00000204305|ENST00000375076|AGER', 'nc|ENSG00000204305|Q15109-6|AGER', 'nc|ENSG00000204305|Q15109-5|AGER', 'nc|ENSG00000204305|Q15109-8|AGER', 'nc|ENSG00000204305|Q15109-2|AGER', 'nc|ENSG00000204305|Q15109-9|AGER'] 30081 21056 FYNLLTRTF True PC9_epitope_Rep1 1173.61824439805 1173.6171499358602 85.822 2 0.20904533114330578 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 72399 14078 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54126993586 59.305 2 0.20904370840429337 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 96956 10175 SEVEVIHVP True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 44.183 2 0.20904036252911493 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 40378 18478 HRTEMDWVL True PC9_epitope_Rep1 1185.5600778989299 1185.55843490379 75.867 3 0.20903655537215968 0.0004555289830315454 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 41649 15238 IDIIPNPQER True PC9_epitope_Rep1 1193.64043639461 1193.6393299358601 63.432 2 0.20903380143659794 0.0004555289830315454 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 34827 8242 GQVEIKTDL True NCI_RA007_Epitope_Rep4 1001.5393253710099 1001.53822993586 38.498 2 0.20903132786435308 0.0004555289830315454 0.9438714419765777 ['ENSG00000123838|ENST00000367070|C4BPA'] 89262 4588 RELEDATETA True H1975_Epitope_Rep2 1133.52004647841 1133.51894993586 22.752 2 0.20902857693036797 0.0004555289830315454 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 103067 17454 SQLELGVHL True PC9_epitope_Rep4 994.54474510462 994.54364993586 75.133 2 0.20902534643510481 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 76493 10186 NTDHLTTVLY True H1975_Epitope_Rep3 1175.58225281215 1175.5811499358601 44.225 2 0.20901857541524807 0.0004555289830315454 0.9438714419765777 ['nc|nan|Q96EF9|ZHX1-C8orf76', 'ENSG00000189376|ENST00000276704|C8orf76'] 23893 8623 EYMKHTRLF True PC9_epitope_Rep4 1223.6121134717898 1223.61046490379 40.65 3 0.2090139239401844 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 48256 4832 KDGVVEITGK True NCI_RA007_Epitope_Rep2 1044.5815245361598 1044.5804299358601 23.419 2 0.20901306191856056 0.0004555289830315454 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 76541 10117 NTDPSIVM[Oxidation]TY True H1975_Epitope_Rep1 1155.51179067427 1155.51068993586 43.851 2 0.2090117865519976 0.0004555289830315454 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 37947 10919 HEENPAWLP True H1975_Epitope_Rep3 1091.50360856863 1091.5025099358602 47.088 2 0.20900734508870175 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000114993|Q9BST9-3|RTKN', 'nc|ENSG00000114993|Q9BST9-2|RTKN', 'ENSG00000114993|ENST00000272430|RTKN'] 22960 17791 EVIEKFDYV True PC9_epitope_Rep1 1140.5702911461199 1140.56918993586 73.229 2 0.20900667881103843 0.0004555289830315454 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 133249 10115 WEEETVPTTA True H1975_Epitope_Rep2 1161.51898384925 1161.51788993586 43.904 2 0.2090063728703661 0.0004555289830315454 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 9995 8802 AYSSYVHQY True PC9_epitope_Rep6 1116.48762415132 1116.48652993586 43.76 2 0.20899810883773895 0.0004555289830315454 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 95371 15232 SAIDRIFTL True H1975_Epitope_Rep3 1034.5760452329 1034.57494993586 63.996 2 0.2089922222734831 0.0004555289830315454 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3'] 2156 5421 AEMAEEAQQQA True H1975_Epitope_Rep3 1204.50301651528 1204.50190993586 25.911 2 0.20898578544755336 0.0004555289830315454 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 74064 14568 NHTIYINNL True PC9_epitope_Rep1 1100.5614577979202 1100.56036993586 60.86 2 0.208980753457372 0.0004555289830315454 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 70384 21063 LYQEIIHYF True PC9_epitope_Rep5 1224.61791004488 1224.6168099358601 86.078 2 0.20897500270233665 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 48702 7894 KEMLPHVGV True H1975_Epitope_Rep2 1008.5426369296399 1008.54152993586 35.31 2 0.20897338151976164 0.0004555289830315454 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 114919 7817 TTEVHPELY True H1975_Epitope_Rep3 1087.5185899264297 1087.51748993586 35.051 2 0.20897248545742023 0.0004555289830315454 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 17364 6751 EHDTTEYKL True PC9_epitope_Rep5 1134.51931820242 1134.51766490379 30.939 3 0.20896380219170024 0.0004555289830315454 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 89484 7189 REQLVDVQA True H1975_Epitope_Rep2 1056.55637241748 1056.55526993586 32.587 2 0.20893221385769076 0.0004555289830315454 0.9438714419765777 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000488706.1_1_10:71007290-71008567:+|nuORF', 'nc|ENSG00000156510|Q2TB90-3|HKDC1'] 22983 17802 EVIKELAQI True PC9_epitope_Rep5 1041.6070110080097 1041.6059099358602 73.495 2 0.2089319163575594 0.0004555289830315454 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 39346 4647 HLTGEFEK True NCI_RA007_Epitope_Rep2 959.47124581119 959.47014993586 22.702 2 0.2089126448052533 0.0004555289830315454 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000541630.5_1_12:131357386-131357560:+|nuORF', 'ENST00000464211.6_1_12:131357386-131359105:+|nuORF', 'ENST00000537745.5_1_12:131357386-131357560:+|nuORF'] 69485 11139 LVSESSDVLPK True PC9_epitope_Rep1 1172.6288686514001 1172.6277699358602 47.731 2 0.2089090199062567 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 11489 8223 DGETLEELM[Oxidation]K True H1975_Epitope_Rep1 1179.5329200416697 1179.53182993586 36.573 2 0.20890840000626548 0.0004555289830315454 0.9438714419765777 ['ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 138061 5168 YQDTHPERL True PC9_epitope_Rep1 1157.5465360097699 1157.54542993586 24.732 2 0.20890791246642754 0.0004555289830315454 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 28305 16380 FRYPTTEEL True PC9_epitope_Rep1 1154.5607890915799 1154.5596899358602 67.828 2 0.2089038692230098 0.0004555289830315454 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 48605 6662 KEIENTYANVA True NCI_RA007_Epitope_Rep4 1250.61428121642 1250.6131899358602 32.248 2 0.20887624545670586 0.0004555289830315454 0.9438714419765777 ['ENSG00000155962|ENST00000369449|CLIC2'] 8620 14454 AVALERTFVGA True PC9_epitope_Rep4 1132.62405805448 1132.62296993586 63.506 2 0.20887340966046467 0.0004555289830315454 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN'] 60177 13487 LHYPSTTAL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 56.897 2 0.20887251325568507 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 22399 15269 ETEVYEGALLY True H1975_Epitope_Rep1 1285.6077988536497 1285.6067099358602 64.0 2 0.20886652447244988 0.0004555289830315454 0.9438714419765777 ['ENSG00000099910|ENST00000328879|KLHL22', 'nc|ENSG00000099910|Q53GT1-3|KLHL22'] 1372 4800 AEEEPNRIPS True H1975_Epitope_Rep3 1140.54111627616 1140.54000993586 23.591 2 0.20886264961722928 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 10881 5162 DAPQDFHPDR True NCI_RA007_Epitope_Rep1 1196.52104953792 1196.51941490379 24.162 3 0.2088604571504335 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'FLNA|p.R664L|1|0.13|ENSG00000196924|chrX:154364557-154364557|C/A|missense_variant'] 53504 17458 KVLNELTQL True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 72.152 2 0.20885519325565174 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 33398 18357 GLFIIDDK True PC9_epitope_Rep2 919.5014833103099 919.50038993586 75.94 2 0.20885344334594436 0.0004555289830315454 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 128189 13464 VRTPYTMSY True PC9_epitope_Rep1 1116.52738078832 1116.5262899358602 56.646 2 0.20885185525380187 0.0004555289830315454 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 72828 17414 NALDKVLSV True PC9_epitope_Rep4 957.54949613189 957.54838993586 74.976 2 0.20885031882174956 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8', 'NARS2-ALG8|2|fusion', 'NARS2-ALG8|1|fusion', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 47777 10361 IYQRDPLKL True PC9_epitope_Rep4 1144.6604435631998 1144.65934993586 47.551 2 0.20884904231347154 0.0004555289830315454 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 90385 22162 RILDIDIPLSV True PC9_epitope_Rep5 1252.7390878067201 1252.73798993586 90.283 2 0.20884562174670435 0.0004555289830315454 0.9438714419765777 ['ENSG00000115112|ENST00000263707|TFCP2L1'] 89717 11523 REYQDLLNV True NCI_RA007_Epitope_Rep4 1148.5825871653199 1148.5814899358602 51.27 2 0.2088435574865124 0.0004555289830315454 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 14383 17210 DTEPPPLLVY True H1975_Epitope_Rep2 1142.5859412102598 1142.5848499358601 71.488 2 0.20883085116214864 0.0004555289830315454 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 53795 13191 KYFLKPEVL True PC9_epitope_Rep6 1135.6641319613097 1135.66302993586 62.384 2 0.20882731861732154 0.0004555289830315454 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 41053 20082 HYINMPVQF True PC9_epitope_Rep3 1147.5484505860697 1147.5473499358602 82.497 2 0.20881491680440803 0.0004555289830315454 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF', 'ENST00000513183.1_1_18:13124610-13124766:+|nuORF', 'ENST00000510237.5_1_18:13103579-13124766:+|nuORF'] 24300 10756 FADDGVKYL True H1975_Epitope_Rep2 1026.5022115863 1026.50110993586 46.402 2 0.20879578180276673 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000168803|Q6DHV7-3|ADAL', 'ENSG00000168803|ENST00000562188|ADAL', 'nc|ENSG00000168803|Q6DHV7-2|ADAL'] 47454 17552 IYISTLKTEF True PC9_epitope_Rep6 1213.6594405036901 1213.65834993586 80.153 2 0.20879462380144426 0.0004555289830315454 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 53404 17900 KVFDPVPVGV True PC9_epitope_Rep2 1055.60153170475 1055.6004299358601 74.156 2 0.2087942915028313 0.0004555289830315454 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 27345 21164 FMFDEKLVTV True PC9_epitope_Rep1 1227.62094681999 1227.6198499358602 86.24 2 0.20879181267929697 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 7434 9312 ASDDFDQASY True H1975_Epitope_Rep2 1117.4199980839699 1117.41890993586 40.779 2 0.20879138209641174 0.0004555289830315454 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 72410 15211 MTELPAPLSY True H1975_Epitope_Rep2 1120.5474475265598 1120.5468749679299 63.665 1 0.208790631458061 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 33223 13506 GLADNTVIAKV True PC9_epitope_Rep6 1099.62372370131 1099.62262993586 63.662 2 0.20878716532366384 0.0004555289830315454 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 1550 9258 AEEVWARVA True H1975_Epitope_Rep2 1029.5243440132097 1029.5232499358601 40.567 2 0.20878069677983366 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 139122 7679 YSQADALKY True H1975_Epitope_Rep3 1057.50802524273 1057.5069299358602 34.52 2 0.20877540343121748 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000108799|Q92800-5|EZH1', 'nc|ENSG00000108799|Q92800-4|EZH1', 'nc|ENSG00000106462|Q15910-5|EZH2', 'nc|ENSG00000108799|Q92800-3|EZH1', 'nc|ENSG00000106462|Q15910-3|EZH2', 'nc|ENSG00000106462|Q15910-4|EZH2', 'nc|ENSG00000106462|Q15910|EZH2', 'ENSG00000108799|ENST00000428826|EZH1', 'nc|ENSG00000108799|Q92800-2|EZH1', 'ENST00000586714.1_1_17:40854552-40854989:-|nuORF', 'ENST00000492143.5_1_7:148504740-148513906:-|nuORF', 'ENSG00000106462|ENST00000320356|EZH2', 'ENST00000431167.1_1_21:36972032-36972302:-|nuORF'] 52172 19934 KMDASLGNLFA True PC9_epitope_Rep2 1165.58014463717 1165.5790499358602 82.073 2 0.2087718565910808 0.0004555289830315454 0.9438714419765777 ['ENSG00000196937|ENST00000359943|FAM3C'] 70466 18524 LYSEVSHLL True PC9_epitope_Rep2 1059.56006081559 1059.5589699358602 76.596 2 0.20876990849055066 0.0004555289830315454 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 18268 6618 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep1 1176.6060254122801 1176.6049299358601 30.512 2 0.20876228661269702 0.0004555289830315454 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 87470 13656 QTETGTPYMLY True H1975_Epitope_Rep1 1302.5802042068199 1302.57910993586 57.661 2 0.20875827294399807 0.0004555289830315454 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 97066 7509 SEYLRYEDT True H1975_Epitope_Rep2 1174.51423282198 1174.5131299358602 33.833 2 0.20875604965436767 0.0004555289830315454 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant'] 87038 5802 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 27.306 2 0.20875517288634846 0.0004555289830315454 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 48690 4477 KEMELPAKEA True H1975_Epitope_Rep2 1144.5798102839997 1144.5787099358602 22.333 2 0.20874899394813237 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 40361 4607 HRTELETKL True PC9_epitope_Rep2 1125.61422164677 1125.61258490379 23.09 3 0.20874114842798355 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 106168 11647 SVPEFPLSPPK True NCI_RA007_Epitope_Rep4 1196.6441247927198 1196.64302993586 51.757 2 0.20874043949455076 0.0004555289830315454 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 28861 9363 FTDQQKLIY True H1975_Epitope_Rep1 1154.5971746002997 1154.5960699358602 40.922 2 0.20873230784162392 0.0004555289830315454 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 84841 13444 QHNDLEFKL True PC9_epitope_Rep2 1142.57202248162 1142.57038490379 56.993 3 0.20873176913833627 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 52663 8561 KQFEKQVEL True PC9_epitope_Rep5 1147.6237237013097 1147.62208490379 37.872 3 0.20872651706503673 0.0004555289830315454 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 91145 14763 RLPEIYIQL True NCI_RA007_Epitope_Rep3 1143.66519459047 1143.6640899358601 65.486 2 0.20872041498296726 0.0004555289830315454 0.9438714419765777 ['EHD4|p.I335M|1|0.07|ENSG00000103966|chr15:41909783-41909783|G/C|missense_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 97057 5988 SEYIHAQVA True NCI_RA007_Epitope_Rep3 1016.4927095317598 1016.49217496793 30.533 1 0.20871463163245002 0.0004555289830315454 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 19958 12956 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep3 1154.4801561928198 1154.47904993586 55.066 2 0.2087080988096658 0.0004555289830315454 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 71792 15510 [Acetylation]-M[Oxidation]NPEYDYLFK True H1975_Epitope_Rep1 1376.5958549677 1376.5947499358601 64.932 2 0.20870575843569508 0.0004555289830315454 0.9438714419765777 ['ENSG00000174903|ENST00000311481|RAB1B', 'ENST00000494188.1_1_2:65298326-65357199:-|nuORF', 'nc|ENSG00000138069|P62820-3|RAB1A', 'nc|ENSG00000138069|P62820-2|RAB1A', 'ENSG00000138069|ENST00000409784|RAB1A'] 32102 11191 GEYGKFFVT True NCI_RA007_Epitope_Rep4 1046.50729696674 1046.5061899358602 49.933 2 0.20870473156318395 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 12597 12703 DLDSRVLYY True H1975_Epitope_Rep3 1142.5607890915799 1142.5596899358602 54.073 2 0.2086947530427404 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 89404 5285 REMPVKVEA True NCI_RA007_Epitope_Rep4 1057.5590152697698 1057.5579099358602 26.88 2 0.20868685027429354 0.0004555289830315454 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 25880 19698 FGIDLDTRV True PC9_epitope_Rep1 1034.53965972418 1034.53856993586 80.594 2 0.2086854460824064 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 39861 20687 HQIDLIVQL True PC9_epitope_Rep1 1077.61824439805 1077.6171499358602 84.396 2 0.20867919872176965 0.0004555289830315454 0.9438714419765777 ['ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 46178 8586 ITDHGSLIY True H1975_Epitope_Rep1 1017.51311062317 1017.51200993586 37.954 2 0.20867790481666 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 89030 11860 REEENYSFLP True H1975_Epitope_Rep2 1282.5829810881396 1282.58188993586 50.699 2 0.2086757961891175 0.0004555289830315454 0.9438714419765777 ['ENST00000585041.1_1_17:17380355-17380580:+|nuORF', 'ENSG00000141026|ENST00000268711|MED9'] 132288 17813 VYLDKFIRL True PC9_epitope_Rep6 1165.68593003505 1165.68482993586 81.149 2 0.20867136348071066 0.0004555289830315454 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 113301 15122 TQIDHYVGI True PC9_epitope_Rep5 1044.52400966004 1044.52290993586 63.173 2 0.2086682252487127 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 4958 20980 ALIEKLVEL True PC9_epitope_Rep1 1026.63249747986 1026.6314099358601 85.525 2 0.20865515108107294 0.0004555289830315454 0.9438714419765777 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 76033 14968 NRLDAELQL True PC9_epitope_Rep6 1070.57202248162 1070.57092993586 69.584 2 0.2086538214693074 0.0004555289830315454 0.9438714419765777 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'KIF13A-CCHCR1|1|fusion', 'ENST00000467553.2_1_6:31112829-31113051:-|nuORF'] 39959 13365 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5439899358599 56.269 2 0.2086529462573558 0.0004555289830315454 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 87054 14013 QSDPWQQELY True H1975_Epitope_Rep3 1292.5673310240002 1292.56622993586 59.222 2 0.20865241519938585 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 107098 14786 SYMGHFDLL True NCI_RA007_Epitope_Rep1 1081.49026700361 1081.4891699358602 61.573 2 0.20864775714230818 0.0004555289830315454 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 46898 16926 IVIRGLNTI True PC9_epitope_Rep2 997.62841515893 997.62730993586 70.349 2 0.20864695173663358 0.0004555289830315454 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 115149 23067 TVADVVLWSV True PC9_epitope_Rep1 1087.59136094387 1087.59026993586 93.527 2 0.20863972690606677 0.0004555289830315454 0.9438714419765777 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 37380 8160 GVYGDVQRV True PC9_epitope_Rep6 991.5086939490699 991.50758993586 40.933 2 0.20861717347028302 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'PTBP2|p.A484Rfs*2|2|0.3|ENSG00000117569|chr1:96813062-96813063|-/T|frameshift_variant', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 75643 21567 NQSELAVLL True PC9_epitope_Rep1 985.5444107514498 985.54330993586 87.778 2 0.2086171192782315 0.0004555289830315454 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 89649 9499 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 41.506 3 0.20861397257987674 0.0004555289830315454 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 86274 9545 QQDPQQYNV True PC9_epitope_Rep1 1118.49925146418 1118.49814993586 41.572 2 0.20861176884717222 0.0004555289830315454 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 62488 19434 LLSPRFVDV True PC9_epitope_Rep1 1044.59678067748 1044.59568993586 79.566 2 0.2086047602332534 0.0004555289830315454 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant', 'ENST00000470300.5_1_1:247027247-247061635:-|nuORF'] 70181 20871 LYLKALEGF True PC9_epitope_Rep5 1052.5906326678798 1052.5895299358601 85.333 2 0.2086014626795401 0.0004555289830315454 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 136914 13730 YKDGTELEL True PC9_epitope_Rep5 1066.51825557326 1066.51714993586 57.835 2 0.20860077415938702 0.0004555289830315454 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 127575 21406 VQWENSFVSV True PC9_epitope_Rep5 1193.57168812845 1193.5705899358602 87.402 2 0.208600462358165 0.0004555289830315454 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 106581 8483 SVYDSVLQK True NCI_RA007_Epitope_Rep5 1037.5393253710097 1037.53822993586 39.313 2 0.20859655166198937 0.0004555289830315454 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 18883 12235 ELEKSVYWDY True H1975_Epitope_Rep3 1330.60813320682 1330.60702993586 52.237 2 0.2085922244098728 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'ENSG00000141258|ENST00000268989|SGSM2'] 9067 14783 AVIVWSFMK True NCI_RA007_Epitope_Rep3 1079.58377346563 1079.5826699358602 65.569 2 0.20859143564868923 0.0004555289830315454 0.9438714419765777 ['ENST00000514133.1_1_4:52895917-52895998:-|nuORF'] 65045 6636 LSDKNIEQY True H1975_Epitope_Rep2 1108.540053647 1108.53894993586 30.433 2 0.208566220120718 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 5426 17550 ALWERIEGV True PC9_epitope_Rep6 1071.5712942056298 1071.57018993586 80.145 2 0.20855947634011784 0.0004555289830315454 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10'] 48375 8962 KEAIETIVAA True H1975_Epitope_Rep2 1043.5862755634298 1043.5851699358602 39.426 2 0.20854494735736723 0.0004555289830315454 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 119102 8851 VEIEDINDHTP True H1975_Epitope_Rep1 1280.5884603913998 1280.5873699358601 38.967 2 0.20853565526049983 0.0004555289830315454 0.9438714419765777 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB4|p.A557Gfs*30|1|0.19|ENSG00000253953|chr5:141389554-141389554|C/-|frameshift_variant', 'PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 107038 21919 SYLPFTEAF True PC9_epitope_Rep4 1073.5069626135698 1073.5058699358601 92.52 2 0.20851729402867805 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 72433 19846 MTISEFDRL True PC9_epitope_Rep1 1110.53794547202 1110.5368499358601 81.155 2 0.20851301935691907 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-4|ABLIM3'] 94361 17451 RYALQMEQL True PC9_epitope_Rep1 1150.5804789903398 1150.57938993586 71.923 2 0.20851236281720067 0.0004555289830315454 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 89252 7321 RELADDITA True H1975_Epitope_Rep2 1002.49818883502 1002.49708993586 33.1 2 0.20851236096098644 0.0004555289830315454 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 67408 7351 LTEAGDYTAKY True H1975_Epitope_Rep2 1230.57683307854 1230.5757299358602 33.216 2 0.2085051366269804 0.0004555289830315454 0.9438714419765777 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 11054 11183 DDPHAC[Carbamidomethyl]YSTVF True H1975_Epitope_Rep1 1310.5237522392902 1310.52264993586 47.984 2 0.2085014601774064 0.0004555289830315454 0.9438714419765777 ['CON__P02769'] 67037 20497 LTAPEDVFSKL True PC9_epitope_Rep5 1218.6496040959798 1218.6485099358601 83.881 2 0.2084974745158546 0.0004555289830315454 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 47672 12105 IYPQVLHSL True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 53.559 2 0.20849414354892257 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 7911 6862 ATAVVDGAFK True H1975_Epitope_Rep3 977.5181960036098 977.51708993586 31.353 2 0.20849363910660884 0.0004555289830315454 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF', 'nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 40235 12957 HRIEEVPEL True PC9_epitope_Rep1 1120.58767254576 1120.58656993586 54.711 2 0.2084921103481134 0.0004555289830315454 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 115145 4965 TVADKIHSV True PC9_epitope_Rep4 968.52909504048 968.52798993586 25.704 2 0.20848434047736394 0.0004555289830315454 0.9438714419765777 ['ENSG00000276023|ENST00000617516|DUSP14'] 14156 15920 DSLIFLVDASK True NCI_RA007_Epitope_Rep2 1206.6496040959798 1206.6485099358601 66.643 2 0.20848240408469643 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000464116.2_1_22:42018008-42024264:+|nuORF'] 113241 6586 TQDTQPHYI True PC9_epitope_Rep6 1101.50908787189 1101.50798993586 34.037 2 0.2084658439841854 0.0004555289830315454 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 39968 13528 HQQSIPAVL True PC9_epitope_Rep3 991.5450794577898 991.5439899358599 57.087 2 0.20846284458577585 0.0004555289830315454 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 21484 5559 ERQPGAASL True PC9_epitope_Rep5 927.4773938207899 927.47628993586 26.388 2 0.20846076199647945 0.0004555289830315454 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 109258 15078 TGAAPIIDVVR True PC9_epitope_Rep2 1110.6397081186199 1110.6386099358601 63.256 2 0.20845585599833336 0.0004555289830315454 0.9438714419765777 ['ENSG00000166441|ENST00000314138|RPL27A'] 138830 8816 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 38.877 2 0.2084526058037649 0.0004555289830315454 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 76040 18670 NRLEEPGNFVL True PC9_epitope_Rep2 1286.6619001151798 1286.66080993586 77.181 2 0.20844736837078112 0.0004555289830315454 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 76065 20957 NRLQYLIDL True PC9_epitope_Rep5 1146.6397081186199 1146.6386099358601 85.671 2 0.20842883614731064 0.0004555289830315454 0.9438714419765777 ['ENSG00000137547|ENST00000260102|MRPL15'] 92365 8555 RQPYAVSEL True NCI_RA007_Epitope_Rep4 1061.5505587610498 1061.54946993586 39.694 2 0.20842179657312207 0.0004555289830315454 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 48710 5049 KEMPTVAQA True NCI_RA007_Epitope_Rep4 973.4902670036098 973.48916993586 25.918 2 0.2084176359282662 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 38762 13016 HHYEGAVVIL True PC9_epitope_Rep2 1136.5978433066398 1136.5961849037901 55.35 3 0.20841041370749191 0.0004555289830315454 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 8302 17616 ATLKELTSL True PC9_epitope_Rep1 974.56481184286 974.56370993586 72.552 2 0.20840583010530814 0.0004555289830315454 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 75722 7582 NQWDGTQHGV True PC9_epitope_Rep2 1140.49483479008 1140.49372993586 34.533 2 0.20840160311745864 0.0004555289830315454 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 102570 17313 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51234993586 71.853 2 0.20839686456933534 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 116989 15926 TYPYLQHEI True PC9_epitope_Rep1 1162.5658744720201 1162.56476993586 66.069 2 0.20839462088847097 0.0004555289830315454 0.9438714419765777 ['PMEPA1|p.S209Qfs*3|1|0.15|ENSG00000124225|chr20:57652292-57652293|-/G|frameshift_variant', 'nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 38623 16943 HHIYLEGTLL True PC9_epitope_Rep2 1194.6397081186199 1194.63805490379 70.412 3 0.20838736347901535 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 40025 4302 HQVEQTEL True NCI_RA007_Epitope_Rep5 982.4719740871799 982.47086993586 23.134 2 0.2083789966582382 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 129392 6956 VTEGSFVYK True NCI_RA007_Epitope_Rep3 1028.5178616504397 1028.51676993586 34.467 2 0.20837732256509559 0.0004555289830315454 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 101868 18077 SPLDMKDGFLA True PC9_epitope_Rep6 1192.579810284 1192.5787099358602 82.165 2 0.2083694045340999 0.0004555289830315454 0.9438714419765777 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 71609 20576 MLLDVMHTV True PC9_epitope_Rep3 1057.5300236406101 1057.52892993586 84.412 2 0.20835580109386795 0.0004555289830315454 0.9438714419765777 ['PARN|p.F419Lfs*7|1|0.37|ENSG00000140694|chr16:14580879-14580879|A/-|frameshift_variant', 'nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN'] 29659 6794 FVM[Oxidation]QEEFSR True H1975_Epitope_Rep1 1187.5281094447498 1187.5270099358602 31.176 2 0.20835206514821916 0.0004555289830315454 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 106946 20701 SYLDNFIKI True PC9_epitope_Rep4 1111.59136094387 1111.59026993586 87.787 2 0.20834575462777605 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 24127 7238 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56954993586 32.852 2 0.20834002753208877 0.0004555289830315454 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 136468 6515 YHGNTNPEL True PC9_epitope_Rep5 1043.46722305991 1043.4661299358602 30.032 2 0.20833370639556162 0.0004555289830315454 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 52180 7134 KM[Oxidation]DDLNLHY True H1975_Epitope_Rep2 1163.52810944475 1163.5270099358602 32.373 2 0.2083259960937128 0.0004555289830315454 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF', 'SPRYD3|p.N13K|1|0.38|ENSG00000167778|chr12:53077246-53077246|G/T|missense_variant'] 114899 6695 TTESEVMKY True H1975_Epitope_Rep2 1086.4903265732598 1086.48922993586 30.662 2 0.20832157916140345 0.0004555289830315454 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 116594 19018 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.54357496793 81.243 1 0.20831892416648123 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 138853 5252 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 25.268 2 0.20831219332074508 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 28063 14630 FRDIAQQL True PC9_epitope_Rep3 989.5294293936499 989.52832993586 61.407 2 0.2083103497218235 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 8976 10551 AVHDSFVAV True PC9_epitope_Rep6 943.4763311916299 943.4752299358599 51.382 2 0.20830386926198208 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 133555 12420 WHSDDEPSL True PC9_epitope_Rep1 1084.44615326216 1084.4450499358602 52.636 2 0.20829981939256376 0.0004555289830315454 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 1588 16497 AEFLKVFLP True H1975_Epitope_Rep2 1062.6113681124598 1062.61026993586 68.675 2 0.20828070174456892 0.0004555289830315454 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3'] 23466 10666 EVYELLDSPGK True H1975_Epitope_Rep1 1248.6237832709596 1248.62268993586 45.985 2 0.2082723888862032 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 40453 9567 HSDPSILGY True H1975_Epitope_Rep1 987.46616043075 987.46506993586 41.722 2 0.20827160420007584 0.0004555289830315454 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 40678 6326 HTLNQIDSVK True PC9_epitope_Rep1 1153.6091362663299 1153.60802993586 29.145 2 0.20827094979052813 0.0004555289830315454 0.9438714419765777 ['CON__P12763'] 40373 6633 HRTELETKL True PC9_epitope_Rep5 1125.61422164677 1125.61258490379 30.487 3 0.20827046971196286 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 56206 19634 LDPHLVLDQLR True PC9_epitope_Rep3 1317.7404847890498 1317.73882490379 80.759 3 0.20826404431096654 0.0004555289830315454 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 8581 11216 AVAEEVNAILK True NCI_RA007_Epitope_Rep5 1155.6499384491499 1155.6488499358602 49.779 2 0.20825458314909562 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 140336 9463 YYEEQHPEL True PC9_epitope_Rep6 1206.5193182024198 1206.51822993586 46.638 2 0.20825180151072828 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 75412 15773 NQFPGFKEV True PC9_epitope_Rep3 1064.52909504048 1064.5279899358602 65.829 2 0.20824960856193292 0.0004555289830315454 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 9594 6170 AYEAELGDAR True H1975_Epitope_Rep3 1093.50400249145 1093.50290993586 28.745 2 0.20824832212077096 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 132847 11461 VYTPVASRQSL True PC9_epitope_Rep1 1219.65608645875 1219.6549899358602 48.964 2 0.20823878344156832 0.0004555289830315454 0.9438714419765777 ['ENSG00000070950|ENST00000264926|RAD18', 'RAD18|p.D408Tfs*40|2|0.17|ENSG00000070950|chr3:8898994-8898994|C/-|frameshift_variant', 'RAD18|p.E392Kfs*4|1|0.11|ENSG00000070950|chr3:8899042-8899042|C/-|frameshift_variant'] 27728 14834 FQDPYTRSL True PC9_epitope_Rep3 1125.54547338061 1125.54436993586 62.195 2 0.20822481080435745 0.0004555289830315454 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 72249 17794 MRYVASYLL True PC9_epitope_Rep6 1114.5845017416198 1114.5834099358601 81.079 2 0.208220696984182 0.0004555289830315454 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 41860 18855 IDTIEIITDR True PC9_epitope_Rep5 1187.63976768827 1187.6386699358602 77.543 2 0.20821734104251133 0.0004555289830315454 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 103903 14164 SRMDGEGQLTL True PC9_epitope_Rep1 1205.5710365054497 1205.56992993586 59.304 2 0.208210005223049 0.0004555289830315454 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 91260 7367 RLVESKVEL True NCI_RA007_Epitope_Rep4 1071.62880908175 1071.6277099358601 34.977 2 0.2082092567484661 0.0004555289830315454 0.9438714419765777 ['ENST00000452767.1_1_10:71914847-71917573:-|nuORF', 'nc|ENSG00000079332|Q9NR31-2|SAR1A', 'ENSG00000079332|ENST00000373241|SAR1A'] 26110 21010 FHFQDQQILTL True PC9_epitope_Rep5 1388.7088503075997 1388.7077499358602 85.872 2 0.20820876290200685 0.0004555289830315454 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 29321 20593 FVDPVLNQL True PC9_epitope_Rep4 1043.56514619603 1043.56404993586 87.363 2 0.20820781396123855 0.0004555289830315454 0.9438714419765777 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C'] 132817 15186 VYTDFAFRI True NCI_RA007_Epitope_Rep5 1130.5760452328998 1130.57494993586 65.096 2 0.2081959776562949 0.0004555289830315454 0.9438714419765777 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000462798.1_1_1:6592521-6593409:-|nuORF'] 17352 6757 EHDTTEYKL True PC9_epitope_Rep1 1134.51931820242 1134.51766490379 30.796 3 0.20818858663248205 0.0004555289830315454 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 132023 12952 VYGSFASKL True PC9_epitope_Rep4 970.5123823471799 970.51128993586 57.709 2 0.2081878165891573 0.0004555289830315454 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 136108 12432 YGEPGEVFINK True PC9_epitope_Rep6 1251.6135529404298 1251.61244993586 59.248 2 0.2081864499225265 0.0004555289830315454 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 87342 11383 QTDADFYQQY True H1975_Epitope_Rep1 1277.52004647841 1277.51894993586 48.764 2 0.20818208882772932 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000116809|Q13105-3|ZBTB17', 'ENSG00000116809|ENST00000375743|ZBTB17', 'nc|ENSG00000116809|Q13105-2|ZBTB17'] 51871 5202 KKPQVVQAL True NCI_RA007_Epitope_Rep4 1009.6284151589299 1009.62730993586 26.541 2 0.2081762062647582 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant'] 22276 4199 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 21.269 2 0.20817510388660598 0.0004555289830315454 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 111604 10187 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep3 1189.6376598937302 1189.63656993586 44.229 2 0.20816183995004187 0.0004555289830315454 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 105909 17156 SVLDLSHNQL True PC9_epitope_Rep2 1124.58258716532 1124.5814899358602 71.248 2 0.20814972879587648 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 35530 3762 GTIEKSKLITK True NCI_RA007_Epitope_Rep4 1216.7390878067197 1216.73743490379 20.633 3 0.20814684787438179 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1-MLLT3|1|fusion', 'NBEAL1|p.R1792Gfs*10|1|0.22|ENSG00000144426|chr2:203149143-203149143|T/-|frameshift_variant'] 131952 12572 VYFSKSEQL True PC9_epitope_Rep5 1099.5549754351498 1099.5538699358601 53.358 2 0.20814269530381857 0.0004555289830315454 0.9438714419765777 ['ENSG00000142627|ENST00000358432|EPHA2'] 75712 16909 NQVLNLIKA True PC9_epitope_Rep5 1011.6076797143498 1011.60658993586 70.055 2 0.20813879660351442 0.0004555289830315454 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 64533 6435 LRDEHNYTL True PC9_epitope_Rep4 1159.56218607391 1159.56055490379 31.848 3 0.20813815905797642 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 77227 18913 NYIEKVVAI True PC9_epitope_Rep3 1047.59644632431 1047.5953499358602 77.97 2 0.20813700606283167 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 67397 9569 LTDYLKNTY True H1975_Epitope_Rep3 1129.56554011885 1129.56444993586 41.816 2 0.20813547936246846 0.0004555289830315454 0.9438714419765777 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000461836.5_1_2:162903409-162929972:-|nuORF'] 5014 20839 ALLDVFREA True PC9_epitope_Rep5 1032.56039516876 1032.55928993586 85.207 2 0.20812647234942952 0.0004555289830315454 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 94378 11622 RYDPQTNEW True PC9_epitope_Rep5 1207.5258005651901 1207.52470993586 49.699 2 0.20812373258893765 0.0004555289830315454 0.9438714419765777 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 138450 12875 YRFETVQKL True PC9_epitope_Rep1 1182.6397081186199 1182.63805490379 54.398 3 0.20811599333420475 0.0004555289830315454 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 89648 9386 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 41.066 3 0.20811538705323848 0.0004555289830315454 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 140170 7947 YVTIIDAPGHR True NCI_RA007_Epitope_Rep1 1240.6564208119198 1240.65478490379 34.904 3 0.20811295403355132 0.0004555289830315454 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF'] 38034 4596 HEISEGNVATA True H1975_Epitope_Rep2 1126.52546621202 1126.52436993586 22.783 2 0.20810256649427103 0.0004555289830315454 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1'] 15197 6219 EAFNM[Oxidation]IDQNR True NCI_RA007_Epitope_Rep5 1252.5506357944798 1252.5495299358602 30.598 2 0.20810170157241245 0.0004555289830315454 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 26153 19494 FHNELLTQL True PC9_epitope_Rep5 1113.5818588893299 1113.5807699358602 80.036 2 0.20809914981147698 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 42890 19160 IFTDLSSRF True PC9_epitope_Rep2 1084.55530978832 1084.5542099358602 79.072 2 0.2080867666061413 0.0004555289830315454 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 17809 14281 EHYYNAISV True PC9_epitope_Rep1 1094.50327421546 1094.5021699358601 59.757 2 0.20808442281054068 0.0004555289830315454 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 106697 18585 SYANYFIRL True PC9_epitope_Rep6 1145.58694426977 1145.58584993586 84.129 2 0.20808130546176806 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 27727 14733 FQDPYTRSL True PC9_epitope_Rep3 1125.54547338061 1125.54436993586 61.808 2 0.20807924239708098 0.0004555289830315454 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 93632 10971 RTDYGQVFTY True H1975_Epitope_Rep3 1248.5775017848798 1248.57640993586 47.288 2 0.20806996457921373 0.0004555289830315454 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 73840 9762 NHEEEISTL True PC9_epitope_Rep3 1070.48801807414 1070.4869299358602 42.502 2 0.2080644253717986 0.0004555289830315454 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 116589 20102 TYGEIFEKF True PC9_epitope_Rep3 1132.54407639828 1132.54357496793 82.574 1 0.20805601133662974 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 28949 8981 FTEQYNEQY True H1975_Epitope_Rep2 1220.4985827578398 1220.4974899358601 39.5 2 0.20804512829992883 0.0004555289830315454 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 132335 9267 VYLPTHTSL True NCI_RA007_Epitope_Rep3 1029.54949613189 1029.54838993586 43.56 2 0.20804393817783565 0.0004555289830315454 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 40500 7890 HSEYHTLLY True H1975_Epitope_Rep2 1161.54547338061 1161.54436993586 35.295 2 0.2080381843297948 0.0004555289830315454 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5'] 108433 5420 TEEKFIVKA True H1975_Epitope_Rep1 1063.5913609438699 1063.59026993586 25.905 2 0.20802825352781446 0.0004555289830315454 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 52674 20599 KQFGNILIL True PC9_epitope_Rep3 1044.6331661861998 1044.63206993586 84.502 2 0.20801652023734196 0.0004555289830315454 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'SMS|p.G166W|1|0.32|ENSG00000102172|chrX:21977227-21977227|G/T|missense_variant', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 52822 19550 KQVEEIFNL True PC9_epitope_Rep5 1118.5971746003 1118.5966749679299 80.252 1 0.20801313172823452 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 89572 6165 RESEGFEEHVP True H1975_Epitope_Rep1 1314.5840437173 1314.5824049037901 28.783 3 0.2080124738645892 0.0004555289830315454 0.9438714419765777 ['ENSG00000119801|ENST00000261353|YPEL5'] 61554 15565 LLGINVTDFTR True NCI_RA007_Epitope_Rep1 1247.68738658703 1247.68628993586 64.631 2 0.20801002901478935 0.0004555289830315454 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 60653 12378 LITPAVVSER True PC9_epitope_Rep2 1083.62880908175 1083.6277099358601 52.922 2 0.20800768877853612 0.0004555289830315454 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 29090 12305 FTQGHIVEV True PC9_epitope_Rep5 1028.52909504048 1028.5279899358602 52.323 2 0.20800740633802173 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 5488 12249 AMLDTVVFK True NCI_RA007_Epitope_Rep4 1022.54705360374 1022.54594993586 54.114 2 0.20799404753162054 0.0004555289830315454 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 17356 5625 EHDTTEYKL True PC9_epitope_Rep2 1134.51931820242 1134.51766490379 27.021 3 0.20799331560814194 0.0004555289830315454 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 11629 6314 DHASIQM[Oxidation]NV True PC9_epitope_Rep5 1029.45494450449 1029.45384993586 29.261 2 0.20798461154474857 0.0004555289830315454 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 47847 12200 IYTFPHSAF True NCI_RA007_Epitope_Rep3 1081.5232813840498 1081.52218993586 55.122 2 0.2079805096189303 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 70945 5894 MELQRAPPA True H1975_Epitope_Rep2 1011.5171504577897 1011.51604993586 27.657 2 0.20797989136325265 0.0004555289830315454 0.9438714419765777 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 114912 7780 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51807496793 34.872 1 0.20796750544778922 0.0004555289830315454 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 28885 13318 FTDVNSILRY True H1975_Epitope_Rep2 1226.62953735774 1226.62844993586 56.358 2 0.20795932882072354 0.0004555289830315454 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 105096 17759 STLHLVLRL True PC9_epitope_Rep2 1050.65496425994 1050.65386993586 73.593 2 0.20795687334684013 0.0004555289830315454 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 8850 8826 AVFPSIVGRPR True NCI_RA007_Epitope_Rep5 1197.69822605425 1197.6965849037902 40.615 3 0.20795493834702114 0.0004555289830315454 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 7499 7205 ASEFPGAQHY True H1975_Epitope_Rep2 1105.48287312405 1105.48176993586 32.649 2 0.20795130867924916 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 44679 20974 IPMELVNEV True PC9_epitope_Rep1 1042.53688284286 1042.53578993586 85.502 2 0.2079504389669604 0.0004555289830315454 0.9438714419765777 ['ENSG00000108773|ENST00000225916|KAT2A', 'nc|ENSG00000108773|Q92830-2|KAT2A'] 137113 15075 YLDDPTNSWY True H1975_Epitope_Rep3 1272.52988288612 1272.52878993586 63.381 2 0.20794194078260395 0.0004555289830315454 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 96047 9584 SEAPKSWMV True H1975_Epitope_Rep2 1033.49026700361 1033.4891699358602 41.841 2 0.20791781331655793 0.0004555289830315454 0.9438714419765777 ['ENSG00000154760|ENST00000285013|SLFN13'] 77563 19582 NYSNIRFQF True PC9_epitope_Rep5 1187.57235683479 1187.5712499358601 80.374 2 0.20791626545206182 0.0004555289830315454 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 114834 11930 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.4974899358601 50.892 2 0.2079048873016202 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 55178 6113 LAPEYEAAATR True H1975_Epitope_Rep1 1190.59315184902 1190.5920499358601 28.582 2 0.20789763858300583 0.0004555289830315454 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 93979 15218 RVPDGMVGL True PC9_epitope_Rep5 942.4956867372199 942.49458993586 63.546 2 0.20789361421730188 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP', 'KHSRP|p.V337Sfs*8|2|0.12|ENSG00000088247|chr19:6417811-6417811|C/-|frameshift_variant'] 118498 11922 VDSLLENLEK True H1975_Epitope_Rep3 1158.61321858726 1158.6121299358601 51.011 2 0.2078898961023157 0.0004555289830315454 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 76786 5548 NVDISAPK True NCI_RA007_Epitope_Rep1 842.4497820906199 842.44868993586 25.65 2 0.20788222354797697 0.0004555289830315454 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant'] 1022 5705 AEAESM[Oxidation]YQIK True NCI_RA007_Epitope_Rep1 1184.53833977528 1184.53724993586 26.249 2 0.20787961412669748 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 138246 13151 YQTQLIQRV True PC9_epitope_Rep1 1147.6349570913499 1147.63386993586 55.45 2 0.20787864375184914 0.0004555289830315454 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 106373 6317 SVSQPIMVQR True NCI_RA007_Epitope_Rep3 1143.60702809135 1143.60592993586 31.851 2 0.20787762747346386 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1'] 41164 19698 HYSPIYLSF True PC9_epitope_Rep4 1125.5494961318898 1125.54838993586 83.889 2 0.20787635009978747 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 117104 12460 TYSEKTTLF True PC9_epitope_Rep4 1088.5389910178399 1088.5378899358602 55.735 2 0.20787174065086947 0.0004555289830315454 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 8627 8028 AVALPLQTK True NCI_RA007_Epitope_Rep5 939.57531695691 939.57420993586 37.571 2 0.2078689476706199 0.0004555289830315454 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 54076 11690 KYLYVDKNF True PC9_epitope_Rep2 1188.6179100448796 1188.61627490379 50.295 3 0.20786569713481828 0.0004555289830315454 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 26532 20145 FIVEEIQRI True PC9_epitope_Rep5 1145.6444591458899 1145.6433699358602 82.535 2 0.2078563179317916 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 70390 17547 LYQEVFGRL True PC9_epitope_Rep6 1123.6025943339098 1123.6014899358602 80.135 2 0.20785285845780607 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 75938 18945 NRFEDILSL True PC9_epitope_Rep6 1105.5767735088898 1105.57566993586 85.517 2 0.2078483531471354 0.0004555289830315454 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 139368 5211 YTDVSTRY True H1975_Epitope_Rep1 1003.46107505031 1003.45996993586 25.107 2 0.20783623630990508 0.0004555289830315454 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 102036 5808 SPPPPPPPP True NCI_RA007_Epitope_Rep3 881.4647038787699 881.46360993586 29.821 2 0.20783061651099305 0.0004555289830315454 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 83257 8045 QADTTRLEL True NCI_RA007_Epitope_Rep3 1045.54038800017 1045.53928993586 38.732 2 0.2078286759138088 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 110979 8625 TLDDESLKY True H1975_Epitope_Rep3 1082.5131701928199 1082.5120699358602 38.169 2 0.2078175986669816 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 21383 16263 ERMEQMYTL True PC9_epitope_Rep5 1199.53148019259 1199.53038993586 67.547 2 0.20781548157238391 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000130762|Q5VV41-2|ARHGEF16', 'ENSG00000130762|ENST00000378378|ARHGEF16', 'ENST00000485984.1_1_1:3389348-3394597:+|nuORF'] 29220 16058 FVDDYTVRV True PC9_epitope_Rep2 1112.55022440788 1112.54912993586 67.023 2 0.20780897913340313 0.0004555289830315454 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 7816 6404 ATADLALGR True NCI_RA007_Epitope_Rep5 886.4872302284999 886.48612993586 31.305 2 0.20780365020687622 0.0004555289830315454 0.9438714419765777 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160056-49160527:-|nuORF'] 103517 12866 SRDDNM[Oxidation]FQI True PC9_epitope_Rep1 1140.48697290876 1140.4858699358601 54.364 2 0.20780091811812362 0.0004555289830315454 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 54125 17261 KYMVYPQTF True PC9_epitope_Rep5 1175.5685173243098 1175.56740993586 71.405 2 0.20779533041419773 0.0004555289830315454 0.9438714419765777 ['ENSG00000112996|ENST00000507110|MRPS30', 'MRPS30|p.V185Sfs*19|1|0.08|ENSG00000112996|chr5:44809514-44809515|-/A|frameshift_variant'] 132305 12238 VYLPLTSHI True NCI_RA007_Epitope_Rep3 1041.58588164061 1041.58478993586 55.285 2 0.20779445081890532 0.0004555289830315454 0.9438714419765777 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 34736 5105 GQNPTNAEVLK True NCI_RA007_Epitope_Rep4 1169.6040508858898 1169.6029499358601 26.146 2 0.20778371206387533 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 130806 5225 VVEVTHDLQK True NCI_RA007_Epitope_Rep2 1166.6295373577398 1166.62844993586 24.944 2 0.20778175004149663 0.0004555289830315454 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 55544 16213 LAYSGKLEEL True PC9_epitope_Rep5 1121.5968402471299 1121.59574993586 67.355 2 0.20777972519139085 0.0004555289830315454 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10', 'nc|ENSG00000101843|O75832-2|PSMD10', 'ENST00000338548.4_1_X:107331957-107334750:-|nuORF', 'ENST00000553388.1_1_X:107330914-107334750:-|nuORF'] 45559 9483 ISGLIYEETR True H1975_Epitope_Rep2 1179.6135529404298 1179.61244993586 41.445 2 0.20777751608218967 0.0004555289830315454 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 113405 21652 TQLNMFQTL True PC9_epitope_Rep1 1094.54303085246 1094.54192993586 88.113 2 0.20776807006418305 0.0004555289830315454 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 40490 5468 HSERHVLLY True H1975_Epitope_Rep2 1152.60399131624 1152.60235490379 26.06 3 0.207761839289262 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 7532 8326 ASEYDQIRY True H1975_Epitope_Rep2 1143.51965255559 1143.5185499358602 36.976 2 0.2077607810739787 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000064393|Q9H2X6-2|HIPK2', 'nc|ENSG00000064393|Q9H2X6-3|HIPK2', 'ENSG00000064393|ENST00000406875|HIPK2'] 103777 10539 SRFPQGAQL True PC9_epitope_Rep2 1002.5246783663797 1002.52358993586 45.859 2 0.20775153239725544 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 2367 10245 AEQFKLIQA True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 44.413 2 0.2077456449433227 0.0004555289830315454 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 85158 21277 QIYDIFQKL True PC9_epitope_Rep5 1166.6335601090198 1166.6324699358602 86.895 2 0.20773986258684532 0.0004555289830315454 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 104071 9442 SRTSIQSEL True PC9_epitope_Rep3 1019.52473793603 1019.52364993586 41.258 2 0.2077372353621418 0.0004555289830315454 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 94498 9341 RYIANTVEL True NCI_RA007_Epitope_Rep5 1077.58185888933 1077.5807699358602 42.571 2 0.20773128674006316 0.0004555289830315454 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 4305 19457 AILELDEHL True PC9_epitope_Rep2 1051.55497543515 1051.5538699358601 80.223 2 0.20772966481416472 0.0004555289830315454 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 108454 14213 TEELPQLINA True H1975_Epitope_Rep2 1126.5870038394198 1126.5859099358602 59.821 2 0.20772420745303508 0.0004555289830315454 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 113196 8859 TQDPTVTRL True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 38.916 2 0.20771845511368683 0.0004555289830315454 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 23563 18975 EYALLYHTL True PC9_epitope_Rep4 1121.5757108797302 1121.57460993586 81.077 2 0.20771425414270378 0.0004555289830315454 0.9438714419765777 ['AOC1|p.L708Wfs*7|1|0.34|ENSG00000002726|chr7:150861073-150861073|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 38754 10190 HHYEGAVVI True PC9_epitope_Rep1 1023.5137793295098 1023.5126899358601 44.074 2 0.20770680931114793 0.0004555289830315454 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 89857 19395 RFLNDPGHLLW True PC9_epitope_Rep4 1366.7146043943799 1366.71295490379 82.713 3 0.20770536977480256 0.0004555289830315454 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 63991 19524 LQAPPLTSL True PC9_epitope_Rep4 938.5436824754601 938.54258993586 83.218 2 0.20769331658866128 0.0004555289830315454 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 84664 6261 QHEGGVQEL True PC9_epitope_Rep5 995.46722305991 995.46612993586 29.06 2 0.2076888383357463 0.0004555289830315454 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 38023 9245 HEIKSELL True PC9_epitope_Rep2 967.5338460677499 967.53274993586 40.899 2 0.20768421034652565 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000123415|Q53HV7-2|SMUG1'] 89478 6973 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 31.743 2 0.2076786950710849 0.0004555289830315454 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 138562 19269 YRPETGSWVF True PC9_epitope_Rep2 1240.58767254576 1240.58656993586 79.491 2 0.20767032829139967 0.0004555289830315454 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 71608 20644 MLLDVMHTV True PC9_epitope_Rep1 1057.5300236406101 1057.52892993586 84.228 2 0.20765613270218797 0.0004555289830315454 0.9438714419765777 ['PARN|p.F419Lfs*7|1|0.37|ENSG00000140694|chr16:14580879-14580879|A/-|frameshift_variant', 'nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN'] 53229 12203 KTEDPDLPAFY True H1975_Epitope_Rep1 1294.6081332068197 1294.60702993586 51.959 2 0.2076501556423815 0.0004555289830315454 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 4800 14399 ALELDSNLYR True PC9_epitope_Rep6 1192.60880191316 1192.6077099358602 67.284 2 0.20764789814634 0.0004555289830315454 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 69272 16420 LVPEFVHNV True PC9_epitope_Rep2 1052.5654805492 1052.5643899358602 68.404 2 0.20764708948380034 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.M758Sfs*26|1|0.14|ENSG00000170921|chr17:63355299-63355303|GACAT/-|frameshift_variant'] 104260 8478 SSDSVGGFRY True H1975_Epitope_Rep1 1073.47778774361 1073.4766899358601 37.54 2 0.2076225126969028 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1'] 109585 8765 THDDSHLVSL True PC9_epitope_Rep4 1122.5305515924601 1122.5289149037899 41.222 3 0.2076200612681138 0.0004555289830315454 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 106952 12275 SYLDRTEQL True PC9_epitope_Rep4 1123.55095268387 1123.54984993586 55.032 2 0.20761861634173048 0.0004555289830315454 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 73860 17845 NHFPGSFQI True PC9_epitope_Rep2 1045.49812926537 1045.4970299358602 73.941 2 0.20761426056031732 0.0004555289830315454 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 51976 16840 KLADDVDLEQV True PC9_epitope_Rep3 1243.62959692739 1243.6284899358602 69.928 2 0.20760561404925024 0.0004555289830315454 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF', 'ENST00000480327.1_1_9:35060776-35061606:-|nuORF'] 12644 6712 DLEGSDIDTR True NCI_RA007_Epitope_Rep2 1119.5043964142699 1119.50328993586 30.72 2 0.20759136281290966 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 97570 5777 SGVSLAALKK True NCI_RA007_Epitope_Rep5 972.59678067748 972.59568993586 28.908 2 0.20758723922849714 0.0004555289830315454 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 117134 17081 TYSPALNKMF True PC9_epitope_Rep4 1170.5743309807401 1170.5732299358601 73.698 2 0.2075855699003113 0.0004555289830315454 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 27675 15143 FQDENHLYL True PC9_epitope_Rep4 1177.54038800017 1177.53928993586 66.175 2 0.20758410273988914 0.0004555289830315454 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 116532 17624 TYEGIFKTL True PC9_epitope_Rep6 1070.56481184286 1070.56370993586 80.43 2 0.20758335901641115 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 29326 10484 FVDPYPVNKY True H1975_Epitope_Rep3 1240.6128246644398 1240.61172993586 45.389 2 0.2075763528993456 0.0004555289830315454 0.9438714419765777 ['ENSG00000174010|ENST00000328046|KLHL15'] 27980 15610 FQTEGKLYL True PC9_epitope_Rep2 1097.5757108797297 1097.57460993586 65.322 2 0.20757097335074232 0.0004555289830315454 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENST00000474934.1_1_1:26877949-26879989:+|nuORF', 'ENST00000527264.5_1_1:26873736-26880810:+|nuORF', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 41572 4900 IDEM[Oxidation]PEAAVK True H1975_Epitope_Rep3 1117.5325261188498 1117.5314299358602 23.975 2 0.20756994357657257 0.0004555289830315454 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'chr1:156745373-156749864|136|12.4|0.54|4.51|-|0|HDGF,None|3', 'chr1:156745373-156750390|167|12.17|0.49|4.62|-|0|HDGF,None|2', 'chr1:156745373-156751791|144|11.51|0.39|4.87|-|0|HDGF,None|1', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 116663 16488 TYIPVPAKI True PC9_epitope_Rep2 1000.5957180483199 1000.59462993586 68.663 2 0.20756927077452245 0.0004555289830315454 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 48909 8270 KEVEYDELSAA True H1975_Epitope_Rep2 1252.5823123818 1252.5812099358602 36.763 2 0.20756920792373076 0.0004555289830315454 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 106974 11168 SYLENVDHF True NCI_RA007_Epitope_Rep3 1122.49818883502 1122.49708993586 51.034 2 0.2075691357735781 0.0004555289830315454 0.9438714419765777 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-5|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF'] 73208 7082 NEFNLESK True NCI_RA007_Epitope_Rep2 979.46107505031 979.45996993586 32.171 2 0.2075687344333702 0.0004555289830315454 0.9438714419765777 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B', 'ENST00000598706.1_1_19:8455252-8465174:+|nuORF'] 47449 23703 IYIPSYFDF True PC9_epitope_Rep1 1163.55391280599 1163.55280993586 95.969 2 0.20755830798603703 0.0004555289830315454 0.9438714419765777 ['ENSG00000117597|ENST00000491415|UTP25', 'ENST00000457820.1_2_1:210016778-210017042:+|nuORF'] 21216 19324 ERFNVPVSL True PC9_epitope_Rep1 1059.5712942056298 1059.57018993586 79.136 2 0.20755619314020304 0.0004555289830315454 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 26238 14107 FHYEADGANVL True PC9_epitope_Rep6 1234.5618517207397 1234.56074993586 66.134 2 0.2075514999312619 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 30023 19172 FYHKYFNYL True PC9_epitope_Rep5 1293.61824439805 1293.6166049037902 78.782 3 0.20754857059836399 0.0004555289830315454 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 43737 18663 IITDLLRSV True PC9_epitope_Rep6 1028.62299542532 1028.62188993586 84.43 2 0.20754732723320704 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000162613|Q96AE4-2|FUBP1', 'ENSG00000162613|ENST00000370768|FUBP1', 'FUBP1|p.Q546Hfs*15|1|0.43|ENSG00000162613|chr1:77956623-77956639|GTGGCTGTGCTTGCTGT/-|frameshift_variant'] 138292 14753 YQYPVIIHL True H1975_Epitope_Rep3 1144.6280808057597 1144.6269899358601 62.125 2 0.20754235208674976 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 139762 8368 YVAFTPEGER True NCI_RA007_Epitope_Rep2 1167.5560380643099 1167.5549499358601 37.19 2 0.20753872900874606 0.0004555289830315454 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 118288 7830 VDAQFGGIDQR True H1975_Epitope_Rep1 1204.5836497944797 1204.58254993586 35.068 2 0.20753637754965532 0.0004555289830315454 0.9438714419765777 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF', 'ENST00000466052.1_1_1:33256818-33263474:-|nuORF', 'ENST00000470377.1_1_1:33256708-33272178:-|nuORF'] 106349 5391 SVSGYIYHK True NCI_RA007_Epitope_Rep4 1052.52909504048 1052.5279899358602 27.305 2 0.20753349508111288 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 54198 17247 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 71.217 2 0.207530701454935 0.0004555289830315454 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 58912 8198 LFVGGIKED True NCI_RA007_Epitope_Rep3 976.5229470308799 976.52184993586 39.378 2 0.20752542570563404 0.0004555289830315454 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 117025 16417 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 68.149 2 0.207520049906372 0.0004555289830315454 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 73778 18023 NHDFQALAL True PC9_epitope_Rep5 1027.50869394907 1027.50758993586 74.342 2 0.20751919354070486 0.0004555289830315454 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 127120 18428 VQDEFLEKL True PC9_epitope_Rep2 1119.5811901829898 1119.58008993586 76.215 2 0.20751474651394775 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 73774 18138 NHDFQALAL True PC9_epitope_Rep3 1027.50869394907 1027.50758993586 74.968 2 0.20751371665934265 0.0004555289830315454 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 28089 20575 FRDYFPIQL True PC9_epitope_Rep4 1197.6182443980497 1197.6171499358602 87.295 2 0.20751177588906863 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 98774 9431 SISLYYTGEK True NCI_RA007_Epitope_Rep5 1159.57610480255 1159.5750099358602 42.913 2 0.20751110396434025 0.0004555289830315454 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 132570 19236 VYPNSFFRY True PC9_epitope_Rep2 1191.5712942056298 1191.57018993586 79.365 2 0.20750861973788826 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 116691 13887 TYITSVSRL True PC9_epitope_Rep2 1038.57095985246 1038.5698699358602 58.697 2 0.20748194492713629 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 75373 13380 NQDDSILKV True PC9_epitope_Rep5 1030.5294889632999 1030.52897496793 56.483 1 0.20747949064893484 0.0004555289830315454 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 41731 18824 IDNNIEQISSY True PC9_epitope_Rep3 1294.60411045554 1294.6030099358602 77.629 2 0.2074790446748019 0.0004555289830315454 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 105363 19939 STYKFFEVI True PC9_epitope_Rep4 1132.580461907 1132.57936993586 84.831 2 0.20747556859509597 0.0004555289830315454 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 77268 17003 NYIRITSEI True PC9_epitope_Rep1 1107.59242357303 1107.5913299358601 70.225 2 0.20747517907641014 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 47631 20154 IYPHGLVLL True PC9_epitope_Rep2 1023.61170246563 1023.61060993586 82.934 2 0.20747207414968613 0.0004555289830315454 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'ENST00000454078.1_1_6:71318605-71318935:-|nuORF'] 133052 10337 VYVVGTAHF True NCI_RA007_Epitope_Rep5 991.5127167003499 991.51160993586 46.391 2 0.2074715789201568 0.0004555289830315454 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 47624 20566 IYPEVVHMF True PC9_epitope_Rep1 1133.5579526406098 1133.55684993586 83.921 2 0.20746821090294523 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 116887 16799 TYNYPVHYF True PC9_epitope_Rep4 1202.53965972418 1202.53856993586 72.588 2 0.20745186098028415 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 132276 13334 VYLDKFIRL True NCI_RA007_Epitope_Rep5 1165.68593003505 1165.68427490379 57.975 3 0.20744748052673884 0.0004555289830315454 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 13747 15056 DQLIYNLLK True H1975_Epitope_Rep1 1118.63356010902 1118.6324699358602 63.163 2 0.20744529704741813 0.0004555289830315454 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000469976.2_1_11:18418389-18418551:+|nuORF'] 116588 20187 TYGEIFEKF True PC9_epitope_Rep3 1132.54407639828 1132.5429699358601 82.908 2 0.20743911235458384 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 61698 21122 LLIDELNKL True PC9_epitope_Rep3 1069.63831113629 1069.63720993586 86.529 2 0.20743843516446228 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 43933 7711 ILELAGNAAR True H1975_Epitope_Rep1 1026.5821932425 1026.58108993586 34.623 2 0.20743804693403894 0.0004555289830315454 0.9438714419765777 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'MACROH2A2|p.D70N|1|0.06|ENSG00000099284|chr10:70090095-70090095|G/A|missense_variant', 'H2AC16|p.E62V|1|0.1|ENSG00000276903|chr6:27865539-27865539|A/T|missense_variant', 'H2AC13|p.E62D|1|0.13|ENSG00000196747|chr6:27808395-27808395|G/C|missense_variant', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 84650 14818 QHEEFVTSL True PC9_epitope_Rep5 1088.51383889916 1088.51274993586 61.997 2 0.2074252018203228 0.0004555289830315454 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 7867 6209 ATANQIILK True NCI_RA007_Epitope_Rep3 970.58113061334 970.58002993586 31.431 2 0.2074244954673861 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 105986 21001 SVLKELLQV True PC9_epitope_Rep5 1027.6277464525897 1027.62664993586 85.843 2 0.20742438134322033 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2'] 94713 13912 RYLEQLHQL True PC9_epitope_Rep1 1198.64585612822 1198.64474993586 58.348 2 0.20741977352861204 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 54341 7890 KYQEVTNNL True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 35.714 2 0.2074133919596211 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 136374 17335 YHDINVYSL True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 71.934 2 0.20741331074408784 0.0004555289830315454 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 134515 18206 WVDPNSPVL True PC9_epitope_Rep6 1025.51819600361 1025.51767496793 82.669 1 0.20741253105656096 0.0004555289830315454 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 135655 15732 YEFLTPVEEAP True H1975_Epitope_Rep2 1293.61288423409 1293.61178993586 65.686 2 0.2073948608823111 0.0004555289830315454 0.9438714419765777 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'ENSG00000111348|ENST00000228945|ARHGDIB', 'chr12:14950724-14951006|170|13.59|0.37|5.18|-|ENST00000541644|ARHGDIB,ARHGDIB'] 103664 15183 SRDPNYLNL True PC9_epitope_Rep1 1090.54072235334 1090.5396299358601 63.223 2 0.20738861884358237 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 61194 11182 LLDPAQKCLY True H1975_Epitope_Rep2 1162.60563110902 1162.60452993586 48.05 2 0.2073801934282918 0.0004555289830315454 0.9438714419765777 ['ENSG00000090612|ENST00000536435|ZNF268', 'ENST00000585488.1_1_12:133768044-133768326:+|nuORF', 'nc|ENSG00000090612|Q14587-8|ZNF268'] 11562 13505 DGQFSVLFTK True H1975_Epitope_Rep1 1140.5815245361598 1140.58097496793 57.066 1 0.20737667611066857 0.0004555289830315454 0.9438714419765777 ['CON__P12763'] 86111 10730 QPQPQPYAV True PC9_epitope_Rep4 1026.5134449763398 1026.5123499358601 49.029 2 0.20736621673658545 0.0004555289830315454 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 23587 18670 EYDNFFQHL True PC9_epitope_Rep6 1211.5247379360299 1211.52364993586 84.458 2 0.20736352149580892 0.0004555289830315454 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'ENST00000491646.1_1_2:122217554-122217677:-|nuORF', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 94364 16468 RYALQMEQL True PC9_epitope_Rep2 1150.5804789903398 1150.57938993586 68.584 2 0.20736169740025365 0.0004555289830315454 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 130605 18643 VVAELLRTV True PC9_epitope_Rep1 998.61243074162 998.61132993586 76.499 2 0.20736021391119003 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 38248 13706 HEYPWILSA True NCI_RA007_Epitope_Rep3 1114.54474510462 1114.54364993586 61.229 2 0.2073598813012597 0.0004555289830315454 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 76310 11195 NSDVVEQIY True H1975_Epitope_Rep3 1065.49785448185 1065.4967499358602 48.159 2 0.2073520038312846 0.0004555289830315454 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 89187 4114 REIEEGQPEA True NCI_RA007_Epitope_Rep4 1156.53603089572 1156.5349299358602 22.107 2 0.20734273509869666 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'SCRIB|p.P592S|1|0.4|ENSG00000180900|chr8:143808950-143808950|G/A|missense_variant'] 93719 6731 RTQGLMIMK True NCI_RA007_Epitope_Rep4 1076.5834561957997 1076.58234993586 32.513 2 0.20733866302065224 0.0004555289830315454 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1', 'nc|ENSG00000137275|Q13546-2|RIPK1'] 48940 6077 KEYDVAVQA True NCI_RA007_Epitope_Rep3 1021.5080252427298 1021.50692993586 30.888 2 0.2073369965029156 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant'] 26763 9965 FLDKSGLQGY True H1975_Epitope_Rep3 1126.56587447202 1126.56476993586 43.364 2 0.20733501791888898 0.0004555289830315454 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant'] 107540 11057 TADHNLLLYE True H1975_Epitope_Rep2 1187.58225281215 1187.5811499358601 47.561 2 0.20731500051950172 0.0005366534292154127 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 137343 20450 YLKDLIEEV True PC9_epitope_Rep5 1120.6015912743999 1120.6004899358602 83.697 2 0.20731478598444947 0.0005366534292154127 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 132161 8582 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5287299358602 40.491 2 0.2073039977714053 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 106261 9611 SVQGIILYR True NCI_RA007_Epitope_Rep3 1047.6076797143498 1047.60658993586 44.887 2 0.2073015154816295 0.0005366534292154127 0.9438714419765777 ['SLC25A4|p.I186L|1|0.58|ENSG00000151729|chr4:185145208-185145208|A/C|missense_variant'] 39969 13616 HQQSIPAVL True PC9_epitope_Rep3 991.5450794577898 991.5439899358599 57.437 2 0.20729636348179659 0.0005366534292154127 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 17686 18347 EHSLPTLGL True PC9_epitope_Rep1 965.51819600361 965.51708993586 75.361 2 0.20729204835662896 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 37603 8884 GYSFTTTAER True PC9_epitope_Rep4 1131.51965255559 1131.5185499358602 41.704 2 0.2072911329089545 0.0005366534292154127 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 22236 6045 ETDNM[Oxidation]FNRY True H1975_Epitope_Rep2 1204.48188752832 1204.48078993586 28.231 2 0.20729081204801844 0.0005366534292154127 0.9438714419765777 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF'] 133314 6997 WEQRTATVV True H1975_Epitope_Rep3 1088.56145779792 1088.56036993586 31.876 2 0.20729048254505328 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 61869 11439 LLLEPYNKY True H1975_Epitope_Rep2 1151.62266107215 1151.6215699358602 49.052 2 0.20728667507128518 0.0005366534292154127 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 113691 9071 TRDETNYGI True PC9_epitope_Rep3 1067.4883524273098 1067.48724993586 39.832 2 0.20728520988346702 0.0005366534292154127 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 91248 13602 RLTEEFQNV True PC9_epitope_Rep1 1134.56693710118 1134.5658499358601 57.176 2 0.20728270601492682 0.0005366534292154127 0.9438714419765777 ['ENST00000486040.1_1_7:2274759-2277695:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000467199.5_1_7:2274759-2281791:-|nuORF'] 21551 13078 ERSDLEYQL True PC9_epitope_Rep4 1151.54586730343 1151.5447699358601 58.196 2 0.20727489205495617 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 71197 17989 M[Oxidation]FLSFPTTK True PC9_epitope_Rep3 1086.54196860374 1086.5408699358602 74.399 2 0.20727166061989077 0.0005366534292154127 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 84942 13053 QHVTTQLVL True PC9_epitope_Rep2 1037.58694426977 1037.58584993586 55.488 2 0.20726821555290872 0.0005366534292154127 0.9438714419765777 ['ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000590168.5_1_17:74469085-74473795:-|nuORF', 'ENST00000589582.5_1_17:74470614-74477615:-|nuORF'] 48454 6406 KEEFQQYAA True H1975_Epitope_Rep2 1112.5138388991602 1112.51274993586 29.564 2 0.20726626201139423 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 14921 20199 DYLEHITSI True PC9_epitope_Rep1 1089.53423999057 1089.5331499358601 82.525 2 0.20726044561123974 0.0005366534292154127 0.9438714419765777 ['ENSG00000099219|ENST00000339450|ERMP1', 'ENST00000475005.1_1_9:5812814-5833063:-|nuORF', 'ENST00000214893.9_1_9:5823966-5832826:-|nuORF'] 87060 12401 QSDYFRALY True H1975_Epitope_Rep2 1161.5454733806098 1161.54436993586 52.787 2 0.20725977007233806 0.0005366534292154127 0.9438714419765777 ['ENSG00000087448|ENST00000381271|KLHL42'] 40676 4307 HTLNQIDSVK True NCI_RA007_Epitope_Rep5 1153.6091362663299 1153.60802993586 23.158 2 0.20725976717454134 0.0005366534292154127 0.9438714419765777 ['CON__P12763'] 108302 5425 TEDDPQEVSA True H1975_Epitope_Rep2 1089.44621283181 1089.44510993586 25.893 2 0.20724348558571384 0.0005366534292154127 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 128390 6291 VSDSKQFTY True H1975_Epitope_Rep2 1073.50293986229 1073.50184993586 29.138 2 0.2072431399849687 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 27757 12326 FQEAEEFLYR True NCI_RA007_Epitope_Rep1 1330.61936659686 1330.61826993586 51.916 2 0.20724173265536716 0.0005366534292154127 0.9438714419765777 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000471700.6_1_14:24612807-24615772:-|nuORF', 'ENST00000560592.5_1_14:24614852-24615790:-|nuORF', 'ENST00000559493.5_1_14:24614434-24615772:-|nuORF'] 96088 9871 SEDLPLNISR True H1975_Epitope_Rep1 1142.59315184902 1142.5920499358601 42.902 2 0.207234254258139 0.0005366534292154127 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 107026 12542 SYLNSVQRL True PC9_epitope_Rep6 1078.5771078620598 1078.5760099358602 59.678 2 0.2072255188217756 0.0005366534292154127 0.9438714419765777 ['ENSG00000136243|ENST00000258742|NUP42', 'nc|ENSG00000136243|O15504-2|NUP42'] 29187 11582 FVAESHIIL True H1975_Epitope_Rep3 1027.57023157647 1027.56912993586 49.679 2 0.20722526850058867 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 11624 6323 DHASIQM[Oxidation]NV True PC9_epitope_Rep1 1029.45494450449 1029.45384993586 29.134 2 0.20721628929925995 0.0005366534292154127 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 113233 7207 TQDTQPHYI True PC9_epitope_Rep2 1101.50908787189 1101.50798993586 33.111 2 0.20720818092981702 0.0005366534292154127 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 113207 7339 TQDPTVTRL True PC9_epitope_Rep6 1029.5454733806098 1029.54436993586 37.402 2 0.20719847720819795 0.0005366534292154127 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 6350 4797 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 25.921 2 0.20719830157231708 0.0005366534292154127 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 95373 7102 SAIDTREEL True NCI_RA007_Epitope_Rep4 1032.50875351872 1032.5076499358602 33.938 2 0.20719702924608757 0.0005366534292154127 0.9438714419765777 ['ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-3|CEP170'] 84711 14838 QHFEFEYQT True PC9_epitope_Rep2 1227.5196525555898 1227.5185499358602 62.339 2 0.2071891643011624 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 93892 19113 RVIDDSLVVGV True PC9_epitope_Rep5 1170.66083748602 1170.6597499358602 78.55 2 0.2071875933338547 0.0005366534292154127 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 51966 7538 KKWTSVIRL True NCI_RA007_Epitope_Rep3 1129.69716342509 1129.69552490379 36.772 3 0.2071844355399497 0.0005366534292154127 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 6791 18868 AQFEHTILL True PC9_epitope_Rep1 1070.5760452329 1070.57494993586 77.361 2 0.2071829934468681 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 41544 4759 IDDPTDSKPED True NCI_RA007_Epitope_Rep2 1230.5251914285 1230.52408993586 23.141 2 0.20716930632978883 0.0005366534292154127 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR'] 69931 16594 LYDPVISKL True PC9_epitope_Rep6 1046.6011973515801 1046.60010993586 76.282 2 0.20716847386005346 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 103053 18245 SQLDVPFKV True PC9_epitope_Rep4 1031.56514619603 1031.56404993586 78.248 2 0.207166050574254 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 104846 8092 STELNHLGY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 36.1 2 0.20716456472347097 0.0005366534292154127 0.9438714419765777 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 138849 4828 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 23.661 2 0.20716355765633074 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 14200 16443 DSTLIM[Oxidation]QLLR True NCI_RA007_Epitope_Rep1 1204.6485589305998 1204.64746993586 68.073 2 0.20715222467199532 0.0005366534292154127 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 116804 21502 TYLPTSPLL True PC9_epitope_Rep5 1003.55899818643 1003.55790993586 87.743 2 0.20714325756298282 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 71568 9091 MLDSHEELY True H1975_Epitope_Rep2 1135.48557554599 1135.48446993586 39.919 2 0.20713845970579228 0.0005366534292154127 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 69870 16848 LYAPYSTHF True PC9_epitope_Rep1 1097.51819600361 1097.5170899358602 69.63 2 0.20712628961422483 0.0005366534292154127 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 109912 9878 THQDVHLGETL True PC9_epitope_Rep5 1248.6098645423199 1248.60820490379 42.966 3 0.20712096436763616 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 111325 20965 TLIDLPGITKV True PC9_epitope_Rep1 1168.70672504928 1168.70562993586 85.465 2 0.2071197599901071 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3'] 77637 12072 NYYEQWGK True PC9_epitope_Rep3 1086.47705946762 1086.4759699358601 51.477 2 0.20711960094886772 0.0005366534292154127 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 94424 16198 RYFENPQVI True PC9_epitope_Rep5 1164.5927579262 1164.5916699358602 67.296 2 0.20711392535402448 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 24327 7250 FADLSEAANR True NCI_RA007_Epitope_Rep5 1092.5199869087598 1092.5188899358602 34.563 2 0.2071122301280201 0.0005366534292154127 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 49470 20926 KIWEELSVLEV True PC9_epitope_Rep4 1343.73366807311 1343.73256993586 88.651 2 0.2071044945444522 0.0005366534292154127 0.9438714419765777 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|245|11.93|0.02|9.4|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3'] 65125 5025 LSDPSGPKSY True H1975_Epitope_Rep2 1049.50293986229 1049.50184993586 24.409 2 0.20709471192578846 0.0005366534292154127 0.9438714419765777 ['RPS6KC1|p.K880Ffs*6|1|0.26|ENSG00000136643|chr1:213242113-213242120|CAAGGAAA/TTT|frameshift_variant', 'nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 53937 7638 KYISKPENL True PC9_epitope_Rep1 1090.60225998074 1090.60116993586 34.203 2 0.20709270285607626 0.0005366534292154127 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 104068 7967 SRTSIQSEL True PC9_epitope_Rep2 1019.52473793603 1019.52364993586 36.009 2 0.20708196688752245 0.0005366534292154127 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 115071 13204 TTSHLMGMFY True H1975_Epitope_Rep3 1186.51510185246 1186.51400993586 56.043 2 0.20707728110675672 0.0005366534292154127 0.9438714419765777 ['ENSG00000168496|ENST00000305885|FEN1'] 96119 9435 SEDSRFITV True H1975_Epitope_Rep3 1052.51383889916 1052.51274993586 41.293 2 0.20707268084880748 0.0005366534292154127 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG'] 94683 10640 RYLEKPMEI True PC9_epitope_Rep4 1177.6165301458898 1177.6154299358602 48.676 2 0.20707016160938008 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 67339 8258 LTDRELEEY True H1975_Epitope_Rep2 1166.54553295026 1166.54442993586 36.716 2 0.20706982513798353 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 41575 5484 IDEM[Oxidation]PEAAVK True NCI_RA007_Epitope_Rep1 1117.5325261188498 1117.5314299358602 25.402 2 0.20706722452547716 0.0005366534292154127 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'chr1:156745373-156749864|136|12.4|0.54|4.51|-|0|HDGF,None|3', 'chr1:156745373-156750390|167|12.17|0.49|4.62|-|0|HDGF,None|2', 'chr1:156745373-156751791|144|11.51|0.39|4.87|-|0|HDGF,None|1', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 61378 7691 LLEKEREDLY True H1975_Epitope_Rep3 1306.6768814729799 1306.6757899358602 34.565 2 0.20706552171437978 0.0005366534292154127 0.9438714419765777 ['ENSG00000102189|ENST00000322349|EEA1'] 74413 11896 NIVEKLREV True PC9_epitope_Rep4 1098.6397081186199 1098.6386099358601 53.534 2 0.20705773889198417 0.0005366534292154127 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 10065 13916 AYVHMVTHF True PC9_epitope_Rep3 1103.52223583823 1103.52112993586 58.609 2 0.20704762267141869 0.0005366534292154127 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 37881 8245 HEAFESDLAA True H1975_Epitope_Rep3 1088.47745339044 1088.47634993586 36.697 2 0.20704618821060922 0.0005366534292154127 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 73890 7271 NHHLQETSF True PC9_epitope_Rep3 1111.50467119779 1111.50356993586 32.977 2 0.207039419052916 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 8061 8682 ATEDPWKTNY True H1975_Epitope_Rep1 1223.54586730343 1223.5447699358601 38.327 2 0.20703815228270311 0.0005366534292154127 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 47545 12930 IYLSKPTHW True PC9_epitope_Rep5 1143.60767971435 1143.60604490379 54.747 3 0.2070352659950513 0.0005366534292154127 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 138455 13416 YRFGDSQQL True PC9_epitope_Rep3 1112.5250722892 1112.5239699358601 56.645 2 0.20703467200234996 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 89614 9114 RETETVFVP True H1975_Epitope_Rep1 1076.5502244078798 1076.54912993586 39.961 2 0.20702911897885262 0.0005366534292154127 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 102943 19149 SQINKFLYL True PC9_epitope_Rep4 1124.62299542532 1124.62188993586 81.753 2 0.2070263366554813 0.0005366534292154127 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 76794 5676 NVDPVQHTY True H1975_Epitope_Rep2 1071.4985231881901 1071.4979749679298 26.83 1 0.2070251421716593 0.0005366534292154127 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 71143 8280 MEVAVEKAVAA True H1975_Epitope_Rep2 1116.58489566444 1116.58378993586 36.799 2 0.2070159142276265 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 90979 21990 RLIESLFTI True PC9_epitope_Rep1 1090.63864548946 1090.63754993586 89.405 2 0.20701505282608115 0.0005366534292154127 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 137325 19848 YLINEIDRI True PC9_epitope_Rep2 1147.62372370131 1147.62262993586 81.737 2 0.20700822056484913 0.0005366534292154127 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 89369 7513 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 33.88 2 0.20700685622357987 0.0005366534292154127 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 106262 9704 SVQGIILYR True NCI_RA007_Epitope_Rep3 1047.6076797143498 1047.60658993586 45.245 2 0.20700616740508934 0.0005366534292154127 0.9438714419765777 ['SLC25A4|p.I186L|1|0.58|ENSG00000151729|chr4:185145208-185145208|A/C|missense_variant'] 135585 16524 YEELNVWQV True H1975_Epitope_Rep1 1178.5607890915799 1178.5596899358602 68.932 2 0.2069984142440077 0.0005366534292154127 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 14680 9648 DVNQQEFVR True PC9_epitope_Rep1 1133.5465360097699 1133.54542993586 41.966 2 0.2069907089856868 0.0005366534292154127 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 42267 11621 IEIDNGDELTA True H1975_Epitope_Rep2 1188.55101225352 1188.5499099358601 49.767 2 0.20699013743361605 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000151239|Q12792-4|TWF1', 'ENSG00000151239|ENST00000395510|TWF1', 'nc|ENSG00000151239|Q12792-3|TWF1'] 22328 10837 ETEGPHVLLY True H1975_Epitope_Rep1 1156.5764391557198 1156.57534993586 46.646 2 0.20697172358124735 0.0005366534292154127 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'ENST00000485263.5_1_6:31998272-32000090:+|nuORF', 'ENST00000468936.5_1_6:31999682-32002424:+|nuORF', 'CON__P01030'] 113517 9841 TQTAVITRI True PC9_epitope_Rep4 1001.5869442697699 1001.58584993586 45.502 2 0.20696613570965908 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 41576 5603 IDEM[Oxidation]PEAAVK True NCI_RA007_Epitope_Rep2 1117.5325261188498 1117.5314299358602 26.411 2 0.20696360781727566 0.0005366534292154127 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'chr1:156745373-156749864|136|12.4|0.54|4.51|-|0|HDGF,None|3', 'chr1:156745373-156750390|167|12.17|0.49|4.62|-|0|HDGF,None|2', 'chr1:156745373-156751791|144|11.51|0.39|4.87|-|0|HDGF,None|1', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 135529 7460 YEEDSYSHIM[Oxidation]A True H1975_Epitope_Rep1 1359.52889729039 1359.52778993586 33.692 2 0.2069631916275657 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 119811 6769 VEVILQHSA True NCI_RA007_Epitope_Rep3 994.5447451046201 994.54364993586 33.724 2 0.2069563301834723 0.0005366534292154127 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'ENST00000472714.1_1_7:107569804-107570089:-|nuORF'] 136918 11713 YKDGTELEL True PC9_epitope_Rep6 1066.51825557326 1066.51714993586 56.199 2 0.20694601549034142 0.0005366534292154127 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 48929 7928 KEYAVNEVVA True NCI_RA007_Epitope_Rep1 1120.57643915572 1120.57534993586 34.831 2 0.20694397128145886 0.0005366534292154127 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 66064 18034 LSNIFVIGK True PC9_epitope_Rep2 989.5909670210499 989.58986993586 74.673 2 0.20693548804653092 0.0005366534292154127 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 114280 8851 TSALPIIQK True NCI_RA007_Epitope_Rep2 969.58588164061 969.58478993586 39.076 2 0.2069354525678407 0.0005366534292154127 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 52792 14534 KQTALVELLK True PC9_epitope_Rep1 1141.7070594024499 1141.7054249037901 60.729 3 0.20693059304536068 0.0005366534292154127 0.9438714419765777 ['CON__P02769'] 29299 15411 FVDPLVTNY True H1975_Epitope_Rep2 1066.53351171458 1066.53297496793 64.437 1 0.2069245731942609 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 69954 16411 LYEEKFESI True PC9_epitope_Rep3 1156.5652057656798 1156.5641099358602 68.262 2 0.20692273965999444 0.0005366534292154127 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'nc|ENSG00000181555|Q9BYW2-2|SETD2'] 138432 20368 YRDWFSSQL True PC9_epitope_Rep5 1200.55637241748 1200.55526993586 83.38 2 0.20692041119426174 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2', 'ENST00000522359.2_1_11:61630757-61632750:+|nuORF'] 12612 7109 DLEAHIDSANK True PC9_epitope_Rep5 1211.57823006087 1211.57712993586 32.313 2 0.20691799362381383 0.0005366534292154127 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 74746 19035 NLLPKLHIV True PC9_epitope_Rep1 1045.66480066765 1045.6637099358602 78.009 2 0.2069113126922435 0.0005366534292154127 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 9824 21363 AYLKAIVLF True PC9_epitope_Rep5 1036.6321035570397 1036.6310099358602 87.232 2 0.20690543066819525 0.0005366534292154127 0.9438714419765777 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 74656 9051 NLGGGVVTIER True NCI_RA007_Epitope_Rep1 1113.61422164677 1113.6131299358601 39.209 2 0.2068964138152924 0.0005366534292154127 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 48847 9304 KESDIYIVA True NCI_RA007_Epitope_Rep4 1036.54407639828 1036.5429699358601 42.643 2 0.20689261673873197 0.0005366534292154127 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 53462 16156 KVIEGLDTGL True PC9_epitope_Rep5 1043.5862755634298 1043.5851699358602 67.131 2 0.20689222251595288 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 135369 10575 YDGIILPGK True NCI_RA007_Epitope_Rep1 974.54368247546 974.54258993586 45.119 2 0.20688364440017598 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 74403 19710 NIVDKFVIV True PC9_epitope_Rep4 1045.61718176889 1045.6160899358601 83.937 2 0.20687601770600295 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 47249 21152 IYEIIDNSQGF True PC9_epitope_Rep5 1297.6190322436898 1297.61792993586 86.414 2 0.20687415078235363 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 251 13358 AAGGVGSIVRV True PC9_epitope_Rep1 984.5716285588 984.57052993586 56.241 2 0.2068724874607908 0.0005366534292154127 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 104216 9236 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep1 1071.45427579815 1071.4531699358602 40.436 2 0.20686071910924791 0.0005366534292154127 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 31524 2621 GEFEKKYVA True NCI_RA007_Epitope_Rep5 1069.5444107514497 1069.5433099358602 14.77 2 0.20686041315030648 0.0005366534292154127 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 8018 11578 ATDPVTGDLY True H1975_Epitope_Rep3 1050.48695544498 1050.4858499358602 49.663 2 0.20685453775960885 0.0005366534292154127 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 28728 20729 FSWEGAFQHV True PC9_epitope_Rep3 1206.54580773378 1206.54470993586 85.002 2 0.20685443231842482 0.0005366534292154127 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 102787 13335 SQESKVLYL True PC9_epitope_Rep2 1065.57062549929 1065.5695299358601 56.566 2 0.20685409907104535 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 114225 8308 TRVSQINTL True PC9_epitope_Rep4 1030.5771078620598 1030.5760099358602 39.414 2 0.20684800027421943 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 106259 10462 SVQGIILYR True NCI_RA007_Epitope_Rep1 1047.6076797143498 1047.60658993586 44.677 2 0.20684594818398508 0.0005366534292154127 0.9438714419765777 ['SLC25A4|p.I186L|1|0.58|ENSG00000151729|chr4:185145208-185145208|A/C|missense_variant'] 132039 7687 VYHHLVETL True NCI_RA007_Epitope_Rep4 1109.58694426977 1109.58584993586 36.231 2 0.2068330972969018 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000099998|P36269-2|GGT5', 'ENSG00000099998|ENST00000327365|GGT5', 'nc|ENSG00000099998|P36269-3|GGT5'] 44978 18575 IQIMKVEEI True PC9_epitope_Rep1 1101.61038213629 1101.60928993586 76.236 2 0.20681701086765783 0.0005366534292154127 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 53228 12106 KTEDPDLPAFY True H1975_Epitope_Rep1 1294.6081332068197 1294.60702993586 51.579 2 0.20680208164638234 0.0005366534292154127 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000574728.1_1_17:1583983-1584260:-|nuORF'] 106194 14909 SVPIDLQKV True PC9_epitope_Rep5 997.58079626017 997.57968993586 62.352 2 0.2067987065498775 0.0005366534292154127 0.9438714419765777 ['ENSG00000198056|ENST00000338193|PRIM1'] 12008 9525 DIAVDGEPLGR True H1975_Epitope_Rep3 1140.5775017848798 1140.57640993586 41.644 2 0.20679471085078563 0.0005366534292154127 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'ENST00000355968.10_1_7:44836323-44838373:+|nuORF'] 61945 18841 LLLNNDNLLR True PC9_epitope_Rep5 1196.6877209401998 1196.68662993586 77.489 2 0.20678513965944842 0.0005366534292154127 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 64154 13701 LQFDKAINA True PC9_epitope_Rep1 1018.5447451046199 1018.54364993586 57.552 2 0.2067846102844467 0.0005366534292154127 0.9438714419765777 ['ENSG00000140307|ENST00000396060|GTF2A2'] 140234 19400 YWMHVQNTF True PC9_epitope_Rep5 1224.53861417836 1224.53750993586 79.668 2 0.20678244244399122 0.0005366534292154127 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 92109 10451 RPYQPLPEA True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 45.087 2 0.20678175911427096 0.0005366534292154127 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 69872 16038 LYAPYSTHF True PC9_epitope_Rep2 1097.51819600361 1097.5170899358602 66.946 2 0.2067692016333715 0.0005366534292154127 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 38068 5457 HEM[Oxidation]FPAVHAA True H1975_Epitope_Rep2 1124.50731443052 1124.5062099358602 26.017 2 0.20676569529020294 0.0005366534292154127 0.9438714419765777 ['ENSG00000113638|ENST00000337702|TTC33'] 61225 11718 LLDPSRGTDFV True H1975_Epitope_Rep2 1218.6244519773 1218.62334993586 50.148 2 0.20676539930139337 0.0005366534292154127 0.9438714419765777 ['ENST00000470731.5_1_7:2598728-2641152:+|nuORF', 'nc|ENSG00000106012|Q6IPM2-2|IQCE', 'nc|ENSG00000106012|Q6IPM2-3|IQCE', 'nc|ENSG00000106012|Q6IPM2-4|IQCE', 'ENSG00000106012|ENST00000402050|IQCE'] 96955 10578 SEVEVIHVP True H1975_Epitope_Rep2 1007.52876068731 1007.52766993586 45.71 2 0.206764547839859 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 108610 5017 TEINSQRIAA True H1975_Epitope_Rep2 1101.5778361380499 1101.5767299358602 24.38 2 0.20675675277242642 0.0005366534292154127 0.9438714419765777 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 70983 16346 MEQISQFLQAA True H1975_Epitope_Rep3 1264.61217304144 1264.61106993586 68.349 2 0.20675142589610832 0.0005366534292154127 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 132272 19822 VYLDHAGATLF True PC9_epitope_Rep5 1205.6080736371698 1205.6069699358602 81.291 2 0.20674285100132836 0.0005366534292154127 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 125806 6567 VNLPINGNGKQ True NCI_RA007_Epitope_Rep3 1152.62512068364 1152.62402993586 32.883 2 0.20674193840336405 0.0005366534292154127 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF', 'ENST00000494593.1_1_11:67353853-67354045:+|nuORF'] 61147 14208 LLDEVFFSEK True H1975_Epitope_Rep1 1225.6230549949698 1225.6219499358601 59.829 2 0.20673708587175307 0.0005366534292154127 0.9438714419765777 ['ENST00000560033.5_1_15:78834730-78834988:+|nuORF', 'ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4'] 77644 19967 NYYKVNWTF True PC9_epitope_Rep2 1233.5818588893296 1233.5807699358602 82.203 2 0.2067357066796744 0.0005366534292154127 0.9438714419765777 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 71341 14910 MHSDMIYNV True PC9_epitope_Rep1 1108.4681516600401 1108.4670499358601 62.173 2 0.2067340389770577 0.0005366534292154127 0.9438714419765777 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 89938 20160 RFVNVVPTF True PC9_epitope_Rep5 1077.5971150306498 1077.5960099358601 82.594 2 0.20672380578012362 0.0005366534292154127 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 31162 16912 GDEELDSLIK True PC9_epitope_Rep5 1117.5502839775297 1117.54918993586 70.066 2 0.20672288704569333 0.0005366534292154127 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 23746 23563 EYIQFVPLL True PC9_epitope_Rep2 1120.6168474157198 1120.61574993586 96.11 2 0.20672153892788625 0.0005366534292154127 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 8872 13755 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6971299358602 57.931 2 0.20671191312464787 0.0005366534292154127 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 84083 9907 QEQEWQTVA True H1975_Epitope_Rep2 1117.50400249145 1117.50290993586 43.096 2 0.20670834389115383 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF'] 67269 4720 LTDNGRHITY True H1975_Epitope_Rep2 1188.58873517492 1188.5870849037901 23.248 3 0.20670749659760143 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 88233 5114 QYEDIANR True NCI_RA007_Epitope_Rep2 1007.4672230599099 1007.46612993586 24.515 2 0.20670634661105394 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 132683 10402 VYRQDCETF True PC9_epitope_Rep5 1159.4968089360298 1159.49570993586 44.997 2 0.2066929105576039 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1', 'PPHLN1|p.E302K|2|0.37|ENSG00000134283|chr12:42398989-42398989|G/A|missense_variant'] 83175 11857 PYTKVEESF True PC9_epitope_Rep5 1098.5233409536997 1098.5222499358601 50.606 2 0.20668666886781306 0.0005366534292154127 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 14808 16975 DYAYLREHF True PC9_epitope_Rep1 1212.5563724174797 1212.55526993586 70.118 2 0.2066732514854147 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 8804 21844 AVFPDDMPTL True PC9_epitope_Rep2 1104.51614739828 1104.5150499358601 89.497 2 0.20664451717558935 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 113563 19017 TQYPFDFRGA True PC9_epitope_Rep3 1200.5563724174797 1200.55526993586 78.371 2 0.2066347386654879 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 70161 22272 LYLEPQGTLF True PC9_epitope_Rep3 1179.6175756917098 1179.61646993586 90.954 2 0.206619084717394 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 112661 4502 TPFQGQGHGA True PC9_epitope_Rep1 998.4569927293797 998.45588993586 22.199 2 0.20661862591233293 0.0005366534292154127 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 54192 10928 KYPDRVPVI True PC9_epitope_Rep4 1085.62332977849 1085.62222993586 49.803 2 0.20661462235070405 0.0005366534292154127 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 109647 6915 THDQAVQAL True PC9_epitope_Rep1 981.4879585044899 981.48686993586 31.404 2 0.20661379438903618 0.0005366534292154127 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 24254 19077 EYYRGFTLF True PC9_epitope_Rep6 1194.5709598524597 1194.5698699358602 86.025 2 0.20660679837009802 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 84707 21209 QHFDTIYSIL True PC9_epitope_Rep3 1235.6186383208699 1235.61754993586 86.87 2 0.20659561297279375 0.0005366534292154127 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 23997 16582 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 69.019 2 0.20658936698564354 0.0005366534292154127 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 136360 6131 YHDEADQSAL True PC9_epitope_Rep4 1147.47818166643 1147.47708993586 30.598 2 0.20658131751958234 0.0005366534292154127 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 140228 19486 YWMHVQNTF True PC9_epitope_Rep1 1224.53861417836 1224.53750993586 79.771 2 0.20657726114418662 0.0005366534292154127 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 87695 11027 QVDPNYAYAY True H1975_Epitope_Rep3 1202.5244035828598 1202.5233099358602 47.504 2 0.20657099930226053 0.0005366534292154127 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF', 'ENST00000425026.1_1_Y:10028050-10028227:-|nuORF'] 36438 12906 GVIGQDGLLFK True NCI_RA007_Epitope_Rep5 1145.6444591458899 1145.6433699358602 56.325 2 0.20656972968933 0.0005366534292154127 0.9438714419765777 ['ENSG00000107371|ENST00000327304|EXOSC3', 'ENST00000465860.5_1_9:37781981-37784738:-|nuORF'] 113910 15206 TRIGLETSL True PC9_epitope_Rep3 988.55530978832 988.55420993586 63.636 2 0.20656637947060238 0.0005366534292154127 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 69862 14732 LYANM[Oxidation]FERL True PC9_epitope_Rep6 1171.56958033391 1171.56848993586 68.616 2 0.20656212540416008 0.0005366534292154127 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 4772 13955 ALEEQLQQIR True PC9_epitope_Rep3 1226.6619001151798 1226.66080993586 58.754 2 0.20656023771647575 0.0005366534292154127 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 34485 14344 GQDGQLKGFAV True PC9_epitope_Rep3 1118.5720224816198 1118.57092993586 60.259 2 0.2065497498957574 0.0005366534292154127 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 93815 15167 RVAQLEQVYI True PC9_epitope_Rep6 1217.6768219033297 1217.67572993586 70.415 2 0.20654787407996855 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 86597 15352 QRDFNSELL True PC9_epitope_Rep3 1120.5512870370399 1120.55018993586 64.207 2 0.2065452901876704 0.0005366534292154127 0.9438714419765777 ['ENSG00000042429|ENST00000251871|MED17'] 73884 7213 NHHLQETSF True PC9_epitope_Rep1 1111.50467119779 1111.50356993586 32.559 2 0.2065302479169376 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 67517 15402 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.5746699358601 64.403 2 0.20652902777107268 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 63988 20229 LQAPPLTSL True PC9_epitope_Rep2 938.5436824754601 938.54258993586 83.228 2 0.20652825213885684 0.0005366534292154127 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 86595 15255 QRDFNSELL True PC9_epitope_Rep1 1120.5512870370399 1120.55018993586 63.498 2 0.2065244566654913 0.0005366534292154127 0.9438714419765777 ['ENSG00000042429|ENST00000251871|MED17'] 104786 8464 STDPREALQY True H1975_Epitope_Rep1 1178.5567663402999 1178.5556699358601 37.486 2 0.20652281734307482 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 39862 20341 HQIDLIVQL True PC9_epitope_Rep2 1077.61824439805 1077.6171499358602 83.664 2 0.20652128849115864 0.0005366534292154127 0.9438714419765777 ['ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 117223 13268 TYVENLRLL True NCI_RA007_Epitope_Rep5 1119.62880908175 1119.6277099358601 57.715 2 0.20651685176866927 0.0005366534292154127 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 103109 20780 SQLPPLREIIL True PC9_epitope_Rep2 1277.77072228817 1277.7696299358602 85.372 2 0.20651636770838902 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 132714 20431 VYSFGFERL True PC9_epitope_Rep1 1116.56039516876 1116.55928993586 83.4 2 0.20650717002290475 0.0005366534292154127 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 3975 14676 AHESAVTGLSL True PC9_epitope_Rep3 1083.55603806431 1083.5549499358601 61.588 2 0.2065005789586492 0.0005366534292154127 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 5772 19753 APELLFFAK True PC9_epitope_Rep4 1034.5800679841798 1034.5789699358602 84.104 2 0.20648273622110733 0.0005366534292154127 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 113323 20993 TQINVGNLEL True PC9_epitope_Rep5 1099.5873381925899 1099.58624993586 85.811 2 0.20647186928662542 0.0005366534292154127 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF'] 84701 17116 QHFDTIYSI True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 73.84 2 0.2064692255865625 0.0005366534292154127 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 138093 18148 YQFGEIRTI True PC9_epitope_Rep2 1125.5818588893299 1125.5807699358602 75.108 2 0.2064671571085458 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 86508 7109 QRAITGASL True PC9_epitope_Rep2 915.5137793295099 915.51268993586 32.741 2 0.20644893213640444 0.0005366534292154127 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 138452 10853 YRFETVQKL True PC9_epitope_Rep4 1182.6397081186199 1182.63805490379 49.504 3 0.2064371969688036 0.0005366534292154127 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483359.5_1_20:34220178-34252711:-|nuORF'] 121425 12759 VGIDIFTGK True NCI_RA007_Epitope_Rep2 948.52803241132 948.52692993586 54.248 2 0.20643568092886924 0.0005366534292154127 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 109911 8654 THQDVHLGETL True PC9_epitope_Rep2 1248.6098645423199 1248.60820490379 38.654 3 0.20643379407618792 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 25150 11913 FDQLLAEEK True PC9_epitope_Rep2 1091.5498900547097 1091.5487899358602 51.148 2 0.2064324996687773 0.0005366534292154127 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 37942 7878 HEEMNYITA True H1975_Epitope_Rep2 1106.47025983502 1106.46916993586 35.249 2 0.20643038323535445 0.0005366534292154127 0.9438714419765777 ['ENST00000524546.5_1_8:42911603-42924800:+|nuORF', 'FNTA|p.Y166Sfs*6|1|0.25|ENSG00000168522|chr8:43069649-43069650|TA/-|frameshift_variant', 'ENST00000526755.5_1_8:42911676-42932640:+|nuORF', 'nc|ENSG00000168522|P49354-2|FNTA', 'ENSG00000168522|ENST00000302279|FNTA'] 77301 15067 NYKDLNGNVF True PC9_epitope_Rep5 1182.5669371011797 1182.5658499358601 62.962 2 0.20642799772759532 0.0005366534292154127 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 98414 22721 SIINFFERL True PC9_epitope_Rep1 1137.61824439805 1137.6171499358602 92.2 2 0.20642466159229753 0.0005366534292154127 0.9438714419765777 ['ENSG00000116793|ENST00000369604|PHTF1', 'PHTF1|p.S622Ffs*15|1|0.3|ENSG00000116793|chr1:113704106-113704107|-/A|frameshift_variant', 'nc|ENSG00000116793|Q9UMS5-2|PHTF1', 'ENST00000481652.1_1_1:114242829-114248598:-|nuORF'] 4112 8686 AHTAEVNCL True PC9_epitope_Rep3 956.43856578392 956.43746993586 38.359 2 0.20642015050033397 0.0005366534292154127 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 129368 12123 VTEEFQPVY True H1975_Epitope_Rep3 1110.5233409536997 1110.5222499358601 51.798 2 0.2064183757001794 0.0005366534292154127 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 99433 10014 SLEIDLDSM[Oxidation]R True H1975_Epitope_Rep1 1193.55980349585 1193.5587099358602 43.455 2 0.20641440248779755 0.0005366534292154127 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000534205.1_1_11:35881882-35882566:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'CON__H-INV:HIT000015463', 'ENST00000452408.1_1_6:28937132-28937360:-|nuORF'] 105607 10125 SVELPIVGK True NCI_RA007_Epitope_Rep3 940.5593325395998 940.55822993586 46.915 2 0.2064133587384791 0.0005366534292154127 0.9438714419765777 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 49397 19189 KILDLETQL True PC9_epitope_Rep2 1071.61757569171 1071.61646993586 79.183 2 0.20641020515038894 0.0005366534292154127 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'ENST00000488909.1_1_9:131260677-131262531:+|nuORF'] 67345 5765 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep1 1056.49099566004 1056.4898899358602 27.245 2 0.2064050272342705 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 104831 6751 STEERTFQY True H1975_Epitope_Rep2 1159.51456717515 1159.51346993586 30.883 2 0.20639719458788178 0.0005366534292154127 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT', 'nc|ENSG00000005469|Q9UKG9-2|CROT'] 15766 9192 EDENFILK True H1975_Epitope_Rep1 1006.4971262058599 1006.49602993586 40.265 2 0.20639160688351232 0.0005366534292154127 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 89223 7765 REIQEAIAVA True NCI_RA007_Epitope_Rep3 1098.6033226098998 1098.6022299358601 37.666 2 0.2063816284829382 0.0005366534292154127 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 104477 8593 SSMSAQLLYK True NCI_RA007_Epitope_Rep3 1126.5692456003 1126.5681499358602 40.871 2 0.20637653249078164 0.0005366534292154127 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000570934.5_1_17:4098183-4145738:-|nuORF'] 6716 15813 AQDEHLITF True PC9_epitope_Rep4 1072.5189242796 1072.5178299358602 68.749 2 0.20636692590980887 0.0005366534292154127 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 102710 17551 SQDSFYRVL True PC9_epitope_Rep3 1113.54547338061 1113.54436993586 72.695 2 0.20635381172725453 0.0005366534292154127 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 93862 6426 RVFSWSQAK True NCI_RA007_Epitope_Rep5 1107.58252759567 1107.5814299358601 31.387 2 0.20635290234454057 0.0005366534292154127 0.9438714419765777 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 13120 12469 DLSLDDFK True H1975_Epitope_Rep3 951.45492704071 951.45382993586 53.156 2 0.20635116122952724 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 52055 21070 KLILLITQV True PC9_epitope_Rep5 1039.7005174700298 1039.69942993586 86.106 2 0.20635046948163197 0.0005366534292154127 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 44787 19673 IPTPIVGV True PC9_epitope_Rep2 794.49019035062 794.48908993586 81.059 2 0.20634987712839278 0.0005366534292154127 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 61273 8418 LLDSSQKNLY True H1975_Epitope_Rep3 1179.61355294043 1179.61244993586 37.363 2 0.20634753423218385 0.0005366534292154127 0.9438714419765777 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 104780 12605 STDPLDAGVDY True H1975_Epitope_Rep2 1151.4982484046698 1151.49714993586 53.582 2 0.20634722821323775 0.0005366534292154127 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 53640 17462 KWNPTAGVAF True PC9_epitope_Rep2 1089.56072952193 1089.5596299358601 72.418 2 0.20634585615393547 0.0005366534292154127 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 136912 12369 YKDGTELEL True PC9_epitope_Rep4 1066.51825557326 1066.51714993586 55.384 2 0.20634474018703564 0.0005366534292154127 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 94367 17345 RYALQMEQL True PC9_epitope_Rep5 1150.5804789903398 1150.57938993586 71.716 2 0.2063279287833108 0.0005366534292154127 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 113203 7837 TQDPTVTRL True PC9_epitope_Rep4 1029.5454733806098 1029.54436993586 37.556 2 0.2063247696095099 0.0005366534292154127 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 57025 4972 LEEEPRGPP True H1975_Epitope_Rep3 1022.5032742154598 1022.50216993586 24.252 2 0.20631805578535015 0.0005366534292154127 0.9438714419765777 ['ENSG00000213015|ENST00000325333|ZNF580'] 36414 19776 GVIDLIFEKA True PC9_epitope_Rep6 1103.62266107215 1103.6215699358602 88.726 2 0.2063173758376166 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 27796 12133 FQEHLQLQNL True NCI_RA007_Epitope_Rep2 1268.6513354314798 1268.6502299358601 51.789 2 0.206309990342726 0.0005366534292154127 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'CLTC-VMP1|2|fusion', 'CLTC-VMP1|25|fusion', 'CLTC-VMP1|23|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 90383 21912 RILDIDIPLSV True PC9_epitope_Rep2 1252.7390878067201 1252.73798993586 89.761 2 0.20629576935257457 0.0005366534292154127 0.9438714419765777 ['ENSG00000115112|ENST00000263707|TFCP2L1'] 104396 3804 SSGVPNPPK True NCI_RA007_Epitope_Rep4 881.4606811274899 881.45958993586 20.813 2 0.20628199237583555 0.0005366534292154127 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2'] 62723 9081 LLYESPERY True H1975_Epitope_Rep3 1168.57643915572 1168.57534993586 39.917 2 0.20627858879935157 0.0005366534292154127 0.9438714419765777 ['ENSG00000168394|ENST00000354258|TAP1', 'nc|ENSG00000168394|Q03518-2|TAP1'] 96118 9306 SEDSRFITV True H1975_Epitope_Rep2 1052.51383889916 1052.51274993586 40.753 2 0.20627648241251673 0.0005366534292154127 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG'] 103349 14763 SQVEILQRV True PC9_epitope_Rep3 1070.6084079903399 1070.60730993586 61.922 2 0.20627348255479763 0.0005366534292154127 0.9438714419765777 ['ENSG00000117318|ENST00000374561|ID3'] 113622 15464 TRDAGYGGLSL True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 64.634 2 0.20627336900202978 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 135235 13515 YAYDGKDYLA True PC9_epitope_Rep1 1177.5291546101298 1177.52804993586 56.842 2 0.20625257616209192 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 103592 13725 SRDKTIIM[Oxidation]W True PC9_epitope_Rep1 1164.59612943492 1164.59502993586 57.641 2 0.20624266489881504 0.0005366534292154127 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 38065 7426 HEMFPAVHA True H1975_Epitope_Rep3 1037.4752856458097 1037.47418993586 33.542 2 0.2062424382856666 0.0005366534292154127 0.9438714419765777 ['ENSG00000113638|ENST00000337702|TTC33'] 132874 9148 VYTSGVYHI True NCI_RA007_Epitope_Rep5 1037.51819600361 1037.5170899358602 41.837 2 0.2062357936707154 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 53367 6932 KTYGEIFEK True NCI_RA007_Epitope_Rep1 1113.57062549929 1113.5695299358601 30.967 2 0.20623348978386313 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 32320 15367 GFVTFDDHD True PC9_epitope_Rep5 1051.42468954159 1051.42358993586 64.119 2 0.20623098698426412 0.0005366534292154127 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 57732 9112 LENLVNQAA True H1975_Epitope_Rep2 970.5083595959 970.50781496793 40.001 1 0.20622821259350937 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 26150 19579 FHNELLTQL True PC9_epitope_Rep3 1113.5818588893299 1113.5807699358602 80.545 2 0.20622356484867724 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 17675 20117 EHSIATLLL True PC9_epitope_Rep2 995.56514619603 995.56404993586 82.788 2 0.20622253283979922 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 89041 6263 REEEYYTEP True H1975_Epitope_Rep2 1214.5091474415399 1214.50804993586 29.037 2 0.20621962879375624 0.0005366534292154127 0.9438714419765777 ['ENSG00000113621|ENST00000358387|TXNDC15', 'nc|ENSG00000113621|Q96J42-2|TXNDC15'] 94282 18618 RWSPVRPLVF True PC9_epitope_Rep4 1255.71896149883 1255.71786993586 79.691 2 0.20621825494800317 0.0005366534292154127 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 53967 20067 KYITQGQLLQF True PC9_epitope_Rep5 1337.73433677945 1337.7332299358602 82.24 2 0.20620986851377615 0.0005366534292154127 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 139229 9174 YTADGKEVLEY True H1975_Epitope_Rep1 1286.6030478263801 1286.6019499358601 40.192 2 0.2062064255320184 0.0005366534292154127 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 117411 14469 VADLHLYLY True H1975_Epitope_Rep2 1105.58079626017 1105.5796899358602 60.811 2 0.20619843559750856 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 22992 16745 EVIRELAGI True PC9_epitope_Rep4 998.5760452328998 998.57494993586 72.378 2 0.2061945969258202 0.0005366534292154127 0.9438714419765777 ['ENSG00000066654|ENST00000396083|THUMPD1'] 11381 6385 DFHVDEQTTVK True H1975_Epitope_Rep3 1317.62009487285 1317.61898993586 29.537 2 0.20617090511580854 0.0005366534292154127 0.9438714419765777 ['CON__P34955'] 48610 8342 KEIEYVETV True H1975_Epitope_Rep2 1108.5652057656798 1108.5641099358602 37.039 2 0.20616215258487622 0.0005366534292154127 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 92445 9143 RQVGVTEML True NCI_RA007_Epitope_Rep3 1031.54336520563 1031.54226993586 43.048 2 0.20616081455872506 0.0005366534292154127 0.9438714419765777 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 21643 10544 ERTNIQVTV True PC9_epitope_Rep5 1058.57202248162 1058.57092993586 45.547 2 0.20615955866526567 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 14622 15269 DVLLQVDDER True PC9_epitope_Rep5 1200.59863115228 1200.5975299358602 63.742 2 0.20614957224898925 0.0005366534292154127 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 52725 15425 KQLDDLKVEL True PC9_epitope_Rep5 1199.6761531969898 1199.6750499358602 64.341 2 0.20614898326002432 0.0005366534292154127 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 99642 12099 SLFTDVVAEK True H1975_Epitope_Rep3 1107.58119018299 1107.58008993586 51.703 2 0.2061447104809188 0.0005366534292154127 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000024146'] 71701 4496 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 22.406 2 0.206139559117884 0.0005366534292154127 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 26548 17343 FIVHTIEEI True PC9_epitope_Rep6 1099.5913609438699 1099.59026993586 79.324 2 0.20613639743931417 0.0005366534292154127 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 107036 22774 SYLPFTEAF True PC9_epitope_Rep3 1073.5069626135698 1073.5058699358601 92.87 2 0.2061334675077459 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 124974 16599 VLNEYFHNV True PC9_epitope_Rep1 1133.5505587610498 1133.54946993586 68.672 2 0.20613088396545487 0.0005366534292154127 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 18287 9475 EITALAPSTM[Oxidation]K True PC9_epitope_Rep3 1176.6060254122801 1176.6049299358601 41.395 2 0.20613079927155242 0.0005366534292154127 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 23625 22028 EYFSYPVSL True PC9_epitope_Rep1 1103.51752729727 1103.51642993586 89.545 2 0.20612916509178514 0.0005366534292154127 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 117131 18570 TYSPALNKMF True PC9_epitope_Rep3 1170.5743309807401 1170.5732299358601 76.654 2 0.20611703724834726 0.0005366534292154127 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 61697 20917 LLIDELNKL True PC9_epitope_Rep2 1069.63831113629 1069.63720993586 85.903 2 0.20610509532128385 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 102891 11728 SQIDPSSIERA True PC9_epitope_Rep1 1201.5938801250102 1201.59278993586 49.986 2 0.2060969321641293 0.0005366534292154127 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 54358 14851 KYQEVTNNLEF True PC9_epitope_Rep4 1383.6670450652698 1383.66594993586 65.063 2 0.20609488831587736 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 95812 12919 SDGIYIINLK True H1975_Epitope_Rep1 1134.62847472858 1134.62736993586 54.768 2 0.20609109501739822 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 70541 21287 LYTPVLIRF True PC9_epitope_Rep5 1120.66446631448 1120.6633699358601 86.935 2 0.2060795813549798 0.0005366534292154127 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 88240 20735 QYEEQFVTL True PC9_epitope_Rep5 1155.5448046742697 1155.54370993586 84.816 2 0.20607921013576247 0.0005366534292154127 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 91368 5123 RM[Oxidation]QKEITAL True NCI_RA007_Epitope_Rep2 1104.59612943492 1104.59502993586 24.55 2 0.20607795498059772 0.0005366534292154127 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 34277 13382 GPLLEEQALTK True PC9_epitope_Rep2 1197.6605031328497 1197.6594099358601 56.755 2 0.20607559163675998 0.0005366534292154127 0.9438714419765777 ['ENSG00000171262|ENST00000397609|FAM98B', 'nc|ENSG00000171262|Q52LJ0-1|FAM98B'] 110058 18098 THYDHVLIEL True PC9_epitope_Rep5 1238.6295373577398 1238.62844993586 74.625 2 0.20607439928888832 0.0005366534292154127 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 113976 12643 TRLEFQQQL True PC9_epitope_Rep6 1161.61422164677 1161.6131299358601 60.097 2 0.20607364011314583 0.0005366534292154127 0.9438714419765777 ['ENSG00000171159|ENST00000372994|BBLN'] 36187 20823 GVFPDNFVKL True PC9_epitope_Rep2 1134.60734536118 1134.6062499358602 85.539 2 0.20607319431910762 0.0005366534292154127 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 88020 6035 QVSPEAGVQKV True PC9_epitope_Rep6 1140.6138872935999 1140.61278993586 31.566 2 0.2060719849480622 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 49408 16724 KILPDLNTV True PC9_epitope_Rep4 1011.59644632431 1011.59534993586 72.297 2 0.20606703148240957 0.0005366534292154127 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 37408 10235 GVYSFQFNK True NCI_RA007_Epitope_Rep3 1088.52909504048 1088.5279899358602 47.336 2 0.20606389022196975 0.0005366534292154127 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000525031.2_1_12:94817522-94817669:-|nuORF'] 24671 6278 FATHAAALSVR True NCI_RA007_Epitope_Rep4 1142.6196413803798 1142.61799490379 30.751 3 0.20605947177006467 0.0005366534292154127 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 94547 18592 RYINNPLLI True PC9_epitope_Rep4 1114.6498788795 1114.6487899358601 79.591 2 0.20605773402565397 0.0005366534292154127 0.9438714419765777 ['TTLL5-RGS6|2|fusion', 'TTLL5-RGS6|5|fusion', 'TTLL5-RGS6|1|fusion', 'TTLL5-RGS6|8|fusion', 'TTLL5-RGS6|4|fusion', 'TTLL5-RGS6|6|fusion', 'TTLL5-RGS6|7|fusion', 'TTLL5-RGS6|3|fusion', 'ENSG00000119685|ENST00000298832|TTLL5', 'TTLL5|p.I678Sfs*12|1|0.11|ENSG00000119685|chr14:75771750-75771756|ATAGCAT/-|frameshift_variant', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 114422 18748 TSDTQWGWFY True H1975_Epitope_Rep3 1289.53530261973 1289.5342099358602 78.622 2 0.20605624054936314 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'nc|ENSG00000111224|Q9NR21-5|PARP11'] 90481 18661 RIYGKFLGL True PC9_epitope_Rep5 1065.6335005393698 1065.63240993586 76.802 2 0.20605508673912765 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'ENST00000556218.5_1_14:102349680-102375988:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 102562 17744 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51289496793 73.05 1 0.20605052998795476 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 73781 18849 NHDFTPLEI True PC9_epitope_Rep2 1084.5189242796 1084.5178299358602 77.871 2 0.20605013865133895 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 138907 9720 YSEDHIIGAY True H1975_Epitope_Rep2 1166.5244035828598 1166.5233099358602 42.374 2 0.20604225849261754 0.0005366534292154127 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 53966 18976 KYITQGQLLQF True PC9_epitope_Rep4 1337.73433677945 1337.7332299358602 81.082 2 0.20604179872366457 0.0005366534292154127 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 61196 9667 LLDPAQKNLY True H1975_Epitope_Rep3 1173.63937376545 1173.63826993586 42.203 2 0.2060403389325379 0.0005366534292154127 0.9438714419765777 ['ENST00000593242.7_1_19:9488987-9489811:+|nuORF', 'ENST00000605093.5_1_19:9488987-9490339:+|nuORF', 'nc|ENSG00000188629|Q13360-3|ZNF177', 'ENSG00000270011|ENST00000541595|ZNF559-ZNF177', 'ENSG00000188629|ENST00000683217|ZNF177'] 29678 18710 FVNDIFERI True PC9_epitope_Rep6 1151.59750895347 1151.59640993586 84.61 2 0.20603941683244759 0.0005366534292154127 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 64117 9176 LQEEMLQR True PC9_epitope_Rep5 1045.52262976105 1045.5215299358601 40.241 2 0.20603502147806232 0.0005366534292154127 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'VIM|p.E187G|1|0.33|ENSG00000026025|chr10:17229982-17229982|A/G|missense_variant'] 95037 11145 RYQTQPVTL True PC9_epitope_Rep5 1104.5927579261997 1104.5916699358602 47.854 2 0.20601690343498022 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 125455 6284 VLTVINQTQK True NCI_RA007_Epitope_Rep5 1142.66592286646 1142.66482993586 30.849 2 0.2060143760318248 0.0005366534292154127 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 21549 13766 ERSDLEYQL True PC9_epitope_Rep2 1151.54586730343 1151.5447699358601 58.237 2 0.20600005171548047 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 85010 10086 QIFNGTFVK True NCI_RA007_Epitope_Rep5 1052.5654805492 1052.5643899358602 45.431 2 0.20597667274829015 0.0005366534292154127 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 85146 15306 QITVNDLPVGR True PC9_epitope_Rep5 1210.6669854956199 1210.6658899358602 63.884 2 0.20597393385202079 0.0005366534292154127 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 61174 14651 LLDLDEELRY True H1975_Epitope_Rep2 1277.6503323719699 1277.6492299358601 61.513 2 0.2059703585280557 0.0005366534292154127 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'nc|ENSG00000119650|Q96FT9-3|IFT43', 'ENST00000554026.5_1_14:76452129-76542971:+|nuORF', 'nc|ENSG00000119650|Q96FT9-4|IFT43'] 91252 13523 RLTEEFQNV True PC9_epitope_Rep5 1134.56693710118 1134.5658499358601 57.038 2 0.20596885180979277 0.0005366534292154127 0.9438714419765777 ['ENST00000486040.1_1_7:2274759-2277695:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000467199.5_1_7:2274759-2281791:-|nuORF'] 135824 6105 YEQETEPVA True H1975_Epitope_Rep2 1064.4662200003997 1064.4651299358602 28.46 2 0.2059667465291389 0.0005366534292154127 0.9438714419765777 ['ENSG00000198042|ENST00000360128|MAK16'] 42283 11678 IEIQKAFAV True H1975_Epitope_Rep2 1017.5858816406098 1017.58478993586 49.992 2 0.20596558215608687 0.0005366534292154127 0.9438714419765777 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD'] 76607 9064 NTFSVVPSPK True NCI_RA007_Epitope_Rep2 1074.5709598524597 1074.5698699358602 39.859 2 0.20596077710715802 0.0005366534292154127 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 107065 21991 SYLSSILRF True PC9_epitope_Rep1 1084.59169529704 1084.5905899358602 89.409 2 0.20596005655731844 0.0005366534292154127 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 107297 14700 SYQRAFNEF True PC9_epitope_Rep5 1160.5250722892 1160.5239699358601 61.546 2 0.2059597108676872 0.0005366534292154127 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 53382 8690 KVADGFKVV True PC9_epitope_Rep2 961.5596668927699 961.55856993586 38.789 2 0.2059570348911966 0.0005366534292154127 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 119122 5553 VEILANDQGNR True NCI_RA007_Epitope_Rep5 1227.6207635791898 1227.6196699358602 28.045 2 0.20594601474671378 0.0005366534292154127 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 14332 14728 DTDLFSQPTY True H1975_Epitope_Rep2 1185.51898384925 1185.51788993586 61.813 2 0.20594190006945132 0.0005366534292154127 0.9438714419765777 ['DGKE|p.S555Ffs*10|1|0.2|ENSG00000153933|chr17:56862749-56862756|CTCTAGTA/-|frameshift_variant', 'ENSG00000153933|ENST00000284061|DGKE', 'nc|ENSG00000153933|P52429-2|DGKE', 'ENST00000576869.5_1_17:54912147-54924989:+|nuORF'] 124365 10648 VLDVETGNEY True H1975_Epitope_Rep2 1137.51898384925 1137.51847496793 45.981 1 0.20594090338264423 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12'] 70558 18128 LYVVDLKKF True PC9_epitope_Rep5 1123.6641319613097 1123.66249490379 74.739 3 0.20593743997742658 0.0005366534292154127 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 61211 9981 LLDPNPHMY True H1975_Epitope_Rep2 1098.5168161046201 1098.51570993586 43.382 2 0.20593574686897054 0.0005366534292154127 0.9438714419765777 ['ENSG00000091844|ENST00000206262|RGS17'] 62471 11469 LLSNDEVTIK True PC9_epitope_Rep2 1130.6183039677 1130.61720993586 49.434 2 0.2059352763907147 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 23840 23076 EYLPIGGLAEF True PC9_epitope_Rep3 1207.6124903112698 1207.6113899358602 94.031 2 0.2059223529817535 0.0005366534292154127 0.9438714419765777 ['CNOT1-GOT2|1|fusion', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2'] 95032 10084 RYQTQPVTL True PC9_epitope_Rep2 1104.5927579261997 1104.5916699358602 44.118 2 0.20592111100519403 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 85490 20589 QLIDKVWQL True PC9_epitope_Rep2 1141.64954452633 1141.64844993586 84.627 2 0.20591824812131224 0.0005366534292154127 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 74592 13685 NLDPLTETY True H1975_Epitope_Rep2 1064.50260550912 1064.5015099358602 57.782 2 0.20591122532473763 0.0005366534292154127 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 139233 9211 YTADGKEVLEY True H1975_Epitope_Rep3 1286.6030478263801 1286.6019499358601 40.422 2 0.20590854928674787 0.0005366534292154127 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 16442 11268 EELNADLFR True H1975_Epitope_Rep3 1105.5403880001697 1105.53928993586 48.445 2 0.20589170138840268 0.0005366534292154127 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 90429 7018 RIQDGLGELK True NCI_RA007_Epitope_Rep4 1127.6298717109098 1127.6287699358602 33.622 2 0.20588227567839548 0.0005366534292154127 0.9438714419765777 ['ENSG00000055130|ENST00000325222|CUL1'] 116820 19691 TYLVDMQRF True PC9_epitope_Rep3 1171.5695799534699 1171.56848993586 80.971 2 0.2058792251722961 0.0005366534292154127 0.9438714419765777 ['ENSG00000180340|ENST00000315323|FZD2'] 40267 7920 HRNEVTVEL True PC9_epitope_Rep2 1095.56727145435 1095.5661699358602 35.83 2 0.20587010207813394 0.0005366534292154127 0.9438714419765777 ['KPNA3|p.N437Kfs*8|1|0.2|ENSG00000102753|chr13:49705682-49705683|-/T|frameshift_variant', 'ENSG00000102753|ENST00000261667|KPNA3'] 125918 8349 VNWATTPSSQK True PC9_epitope_Rep5 1217.6040508858898 1217.6029499358601 37.055 2 0.20586707437630106 0.0005366534292154127 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000496452.5_1_2:70456348-70475673:-|nuORF', 'ENST00000481650.1_1_2:70456348-70475673:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1'] 110083 20891 TIAEGLTLAQV True PC9_epitope_Rep3 1114.62338934814 1114.6222899358602 85.632 2 0.20585812771030376 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 104766 4574 STDPAAPNLK True NCI_RA007_Epitope_Rep3 1012.5189242796 1012.51782993586 24.878 2 0.20585728590583932 0.0005366534292154127 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 135534 6759 YEEEISKVA True H1975_Epitope_Rep3 1066.51825557326 1066.51714993586 30.952 2 0.20585268012632413 0.0005366534292154127 0.9438714419765777 ['ENSG00000163961|ENST00000318037|RNF168'] 48930 7874 KEYAVNEVVA True NCI_RA007_Epitope_Rep2 1120.57643915572 1120.57534993586 35.26 2 0.20583460697246211 0.0005366534292154127 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 75987 21190 NRIDILDSALL True PC9_epitope_Rep2 1241.69795127073 1241.6968499358602 86.963 2 0.20582846928737528 0.0005366534292154127 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 91494 6563 RNVSTGDVNVE True PC9_epitope_Rep3 1188.5734790335998 1188.5723899358602 30.269 2 0.20581763846042467 0.0005366534292154127 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 8323 4355 ATLNVSTTR True NCI_RA007_Epitope_Rep3 961.5192586327701 961.51816993586 23.885 2 0.20581631908531117 0.0005366534292154127 0.9438714419765777 ['ENST00000460846.1_1_13:111557570-111567134:-|nuORF', 'nc|ENSG00000088448|Q9NXR5-2|ANKRD10', 'ENSG00000088448|ENST00000267339|ANKRD10'] 98282 4567 SIFKQPVTK True NCI_RA007_Epitope_Rep3 1046.61243074162 1046.61132993586 24.846 2 0.20581579997005708 0.0005366534292154127 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 36608 22217 GVLKVFLENV True PC9_epitope_Rep5 1116.6542955536 1116.6531899358602 90.466 2 0.20580149498601072 0.0005366534292154127 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 9768 15951 AYLEAIHNF True PC9_epitope_Rep6 1076.52909504048 1076.5279899358602 73.651 2 0.20579721384980304 0.0005366534292154127 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 70286 19198 LYPDHFHLL True PC9_epitope_Rep5 1153.59202965021 1153.59092993586 78.884 2 0.20579701641277617 0.0005366534292154127 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 68461 4556 LTVAENEAETK True H1975_Epitope_Rep3 1203.5982967991097 1203.5971899358601 22.645 2 0.20579128321877674 0.0005366534292154127 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 48203 16743 KAYTSQFVSL True PC9_epitope_Rep1 1142.5971746003 1142.5960699358602 69.23 2 0.20579126263239525 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 22134 15188 ESYSIYVYK True PC9_epitope_Rep3 1150.55464108198 1150.55354993586 63.566 2 0.20578784091150418 0.0005366534292154127 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 8789 6510 AVFDGAQVTSK True NCI_RA007_Epitope_Rep3 1121.57168812845 1121.5705899358602 32.645 2 0.20578337962023116 0.0005366534292154127 0.9438714419765777 ['ENSG00000175274|ENST00000525680|TP53I11'] 23712 17244 EYIKFLRSI True PC9_epitope_Rep4 1167.6651945904698 1167.6640899358601 74.337 2 0.20578202396652964 0.0005366534292154127 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 94622 20893 RYLDEINLL True PC9_epitope_Rep5 1147.62372370131 1147.62262993586 85.419 2 0.20578201759446274 0.0005366534292154127 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 74153 14098 NHYNNIMAL True PC9_epitope_Rep4 1088.50731405008 1088.5062099358602 62.136 2 0.2057810241298808 0.0005366534292154127 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 72535 12120 MVDPLLTKY True H1975_Epitope_Rep2 1078.57326835158 1078.57216993586 51.703 2 0.20577686275767704 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 133227 11603 WEDGRSTLLP True H1975_Epitope_Rep2 1172.58258716532 1172.5814899358602 49.697 2 0.20576977132644853 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000157613|Q96BA8-2|CREB3L1', 'ENSG00000157613|ENST00000621158|CREB3L1'] 30184 22182 FYVDSDMVNEF True PC9_epitope_Rep1 1364.5594687622395 1364.5583699358601 90.143 2 0.2057634413070314 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 61212 20744 LLDPNVKSIFV True PC9_epitope_Rep1 1243.71762408615 1243.71652993586 84.62 2 0.20576171654988354 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3', 'ENSG00000117419|ENST00000372257|ERI3'] 35818 16463 GTYTGFIKV True PC9_epitope_Rep2 984.5280324113198 984.52692993586 68.566 2 0.20576060260151652 0.0005366534292154127 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 104264 8528 SSDSVGGFRY True H1975_Epitope_Rep3 1073.47778774361 1073.4766899358601 37.789 2 0.20574921972061233 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1'] 76583 5936 NTEEEGLKY True H1975_Epitope_Rep2 1081.4927691014097 1081.49166993586 27.817 2 0.20574381266820116 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 43408 8059 IHSEPLGV True PC9_epitope_Rep6 850.45486747106 850.45376993586 40.492 2 0.20574336268874174 0.0005366534292154127 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 14203 16558 DSTLIM[Oxidation]QLLR True NCI_RA007_Epitope_Rep2 1204.6485589305998 1204.64746993586 69.135 2 0.20573367209829677 0.0005366534292154127 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 42723 5176 IFAQDGEGQR True NCI_RA007_Epitope_Rep2 1119.5308859456297 1119.5297899358602 24.753 2 0.20571246947181734 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 83197 21266 PYYSKFILI True PC9_epitope_Rep1 1142.6375828603 1142.63648993586 86.625 2 0.20571111671262526 0.0005366534292154127 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5'] 23748 22839 EYIQFVPLL True PC9_epitope_Rep4 1120.6168474157198 1120.61574993586 96.073 2 0.20570221127589053 0.0005366534292154127 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 129405 5666 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 26.791 2 0.2056980564890648 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 13193 13797 DLTDYLMK True H1975_Epitope_Rep3 997.47903361357 997.47792993586 58.374 2 0.20569152477709954 0.0005366534292154127 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 113322 14339 TQILSVPKV True PC9_epitope_Rep6 983.6015317047498 983.60042993586 67.052 2 0.20568595611932067 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 6794 19035 AQFEHTILL True PC9_epitope_Rep3 1070.5760452329 1070.57494993586 78.439 2 0.20567357325681834 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 2369 9967 AEQFKLIQA True H1975_Epitope_Rep3 1046.5760452329 1046.57494993586 43.372 2 0.2056698992471185 0.0005366534292154127 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 94749 18174 RYLNEFEEL True PC9_epitope_Rep4 1211.5822528121498 1211.5811499358601 77.972 2 0.20566934732514192 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 40293 10148 HRQEIQVVL True PC9_epitope_Rep4 1120.63529144452 1120.6341899358601 46.711 2 0.20566888333570357 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 74757 21380 NLLQVLEKV True PC9_epitope_Rep2 1054.63864548946 1054.63754993586 87.708 2 0.20566694173261194 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 71196 17956 M[Oxidation]FLSFPTTK True PC9_epitope_Rep1 1086.54196860374 1086.5408699358602 73.859 2 0.2056396430301311 0.0005366534292154127 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 31944 12028 GESDDSILRLA True H1975_Epitope_Rep1 1174.58298108814 1174.58188993586 51.275 2 0.20562751025396253 0.0005366534292154127 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 36413 21896 GVIDLIFEKA True PC9_epitope_Rep5 1103.62266107215 1103.6215699358602 89.26 2 0.20562648462813043 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 94608 18406 RYKLYQEMF True PC9_epitope_Rep5 1276.6274291827597 1276.6263299358602 75.819 2 0.20562529617322903 0.0005366534292154127 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 72534 11959 MVDPLLTKY True H1975_Epitope_Rep1 1078.57326835158 1078.57216993586 51.005 2 0.2056229217351989 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 86387 12932 QQLPEIQRV True PC9_epitope_Rep5 1109.61930702721 1109.61820993586 54.755 2 0.2056212555467964 0.0005366534292154127 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57'] 126649 7572 VPQQALVIR True H1975_Epitope_Rep1 1022.6236641316598 1022.62256993586 34.116 2 0.20561778579631113 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant'] 114223 10080 TRVSQINTL True PC9_epitope_Rep3 1030.5771078620598 1030.5760099358602 43.727 2 0.2056145372066548 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 33027 19950 GIYTGFIKV True PC9_epitope_Rep3 996.5644179200399 996.56332993586 81.981 2 0.2056099368974244 0.0005366534292154127 0.9438714419765777 ['ENSG00000153179|ENST00000542104|RASSF3'] 113621 15293 TRDAGYGGLSL True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 63.977 2 0.20559991580302298 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 70401 22965 LYQFNPAFF True PC9_epitope_Rep5 1145.5545815123298 1145.5534899358602 93.325 2 0.20559934670934393 0.0005366534292154127 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 14353 8494 DTDYRSMEY True H1975_Epitope_Rep3 1178.4550036936998 1178.45390993586 37.657 2 0.2055967401363087 0.0005366534292154127 0.9438714419765777 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 37913 6521 HEDVEALAA True H1975_Epitope_Rep2 953.4454249861699 953.44432993586 29.996 2 0.20558745794195757 0.0005366534292154127 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 8415 6986 ATQSFSTFR True NCI_RA007_Epitope_Rep5 1043.50360856863 1043.5025099358602 33.553 2 0.20558479153847042 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7'] 23952 10294 EYNSDLHQF True PC9_epitope_Rep6 1151.4883524273098 1151.48724993586 50.283 2 0.20558357433610056 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 51994 7317 KLEAEIATYR True NCI_RA007_Epitope_Rep2 1192.6451874218799 1192.6440899358602 33.083 2 0.20557689202436624 0.0005366534292154127 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 1551 9490 AEEVWARVA True H1975_Epitope_Rep2 1029.5243440132097 1029.5232499358601 41.472 2 0.20557039806166263 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 140122 20488 YVQDFLNHL True PC9_epitope_Rep3 1147.56620882519 1147.5651099358602 84.065 2 0.20556971871967197 0.0005366534292154127 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 73977 8331 NHNSQVWRV True PC9_epitope_Rep5 1138.5631891334199 1138.56154490379 36.985 3 0.20556840235394166 0.0005366534292154127 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 94365 15673 RYALQMEQL True PC9_epitope_Rep4 1150.5804789903398 1150.57938993586 68.213 2 0.2055654048424583 0.0005366534292154127 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 70058 17646 LYHDIFSRL True PC9_epitope_Rep2 1162.61349337078 1162.6123899358602 73.155 2 0.20556170466851312 0.0005366534292154127 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 26361 13107 FIGNLNTLVVK True NCI_RA007_Epitope_Rep1 1216.71795843932 1216.7168699358601 54.978 2 0.2055603784781807 0.0005366534292154127 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 40146 7642 HRDYETATL True PC9_epitope_Rep1 1104.51998690876 1104.5188899358602 34.218 2 0.20554969067641385 0.0005366534292154127 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 38152 6977 HERAIDFSP True NCI_RA007_Epitope_Rep4 1070.5145076055 1070.5134099358602 33.463 2 0.2055448240780545 0.0005366534292154127 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 138454 12330 YRFGDSQQL True PC9_epitope_Rep2 1112.5250722892 1112.5239699358601 52.74 2 0.2055414207466015 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 41587 9141 IDEPLEGSEDR True PC9_epitope_Rep5 1258.56772494682 1258.5666299358602 40.106 2 0.20552848684920183 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 107179 12710 SYNPITHQL True PC9_epitope_Rep5 1071.5349086969102 1071.53380993586 53.894 2 0.2055086673357429 0.0005366534292154127 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122'] 102703 9540 SQDPYHETL True PC9_epitope_Rep1 1088.4774533904401 1088.47634993586 41.553 2 0.20550754940397978 0.0005366534292154127 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 103510 18263 SRDAAWYQL True PC9_epitope_Rep3 1108.53015766964 1108.5290699358602 75.457 2 0.2055038486152018 0.0005366534292154127 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 133020 14627 VYVQHPITF True PC9_epitope_Rep4 1102.5811306133398 1102.58002993586 64.192 2 0.20550369662941814 0.0005366534292154127 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 77105 17742 NYAQVFNKL True PC9_epitope_Rep5 1095.57129420563 1095.57018993586 73.263 2 0.20549427713203985 0.0005366534292154127 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 12234 14286 DIQLTQSPSF True NCI_RA007_Epitope_Rep5 1134.55570371114 1134.55460993586 61.644 2 0.2054890282805365 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000241755|A0A0C4DH69|IGKV1-9'] 94413 19237 RYFDVGLHNF True PC9_epitope_Rep1 1266.6145559999397 1266.6134499358602 78.795 2 0.2054796238408001 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000054392|Q5VTY9-6|HHAT', 'nc|ENSG00000054392|Q5VTY9-5|HHAT', 'nc|ENSG00000054392|Q5VTY9-2|HHAT', 'ENSG00000054392|ENST00000261458|HHAT', 'nc|ENSG00000054392|Q5VTY9-7|HHAT', 'nc|ENSG00000054392|Q5VTY9-3|HHAT'] 106175 8688 SVPEGPWWRK True NCI_RA007_Epitope_Rep3 1240.63529144452 1240.6336349037902 41.254 3 0.20547758327325794 0.0005366534292154127 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 45026 15036 IQLVEEELDR True PC9_epitope_Rep4 1242.6455813446998 1242.64448993586 65.767 2 0.20547390400198512 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 47473 14457 IYKDSSTFL True PC9_epitope_Rep5 1072.5440763982801 1072.5429699358601 60.609 2 0.20547062679428127 0.0005366534292154127 0.9438714419765777 ['ENSG00000145388|ENST00000388822|METTL14'] 94496 8984 RYIANTVEL True NCI_RA007_Epitope_Rep3 1077.58185888933 1077.5807699358602 42.436 2 0.20546702983242815 0.0005366534292154127 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 22263 5275 ETDRGMSAEY True H1975_Epitope_Rep2 1157.46590273057 1157.46480993586 25.356 2 0.20546244912613948 0.0005366534292154127 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 75406 15718 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.52857496793 65.282 1 0.2054569510214506 0.0005366534292154127 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 54051 16865 KYLSVQGQLF True PC9_epitope_Rep6 1181.64445914589 1181.6433699358602 77.39 2 0.20544795000355198 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 81477 23255 PQPDVFPLF True PC9_epitope_Rep1 1058.54368247546 1058.5425899358602 94.236 2 0.20544684040129166 0.0005366534292154127 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 105850 4372 SVITTSAPNK True NCI_RA007_Epitope_Rep4 1016.55022440788 1016.54912993586 23.165 2 0.20544392438083564 0.0005366534292154127 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 2327 11354 AEQDLIREL True H1975_Epitope_Rep1 1085.57168812845 1085.5705899358602 48.65 2 0.2054408384946679 0.0005366534292154127 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 87810 8505 QVIGVVLQK True NCI_RA007_Epitope_Rep5 982.6175161220598 982.61640993586 39.397 2 0.20543859377664933 0.0005366534292154127 0.9438714419765777 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 53439 13064 KVIDEIYRV True PC9_epitope_Rep2 1133.64445914589 1133.64280490379 55.529 3 0.20543773799766246 0.0005366534292154127 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 138565 19759 YRPETGSWVF True PC9_epitope_Rep5 1240.58767254576 1240.58656993586 81.046 2 0.205429658105177 0.0005366534292154127 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 135596 12272 YEELQSLAGK True PC9_epitope_Rep1 1136.5713537752797 1136.5702499358601 52.06 2 0.20542639178358896 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 35643 13973 GTMEWIMIK True NCI_RA007_Epitope_Rep4 1107.54567370475 1107.5445699358602 61.02 2 0.20542505134642514 0.0005366534292154127 0.9438714419765777 ['ENSG00000168273|ENST00000477703|UQCC5'] 6879 15092 AQIKELEEL True PC9_epitope_Rep2 1071.58119018299 1071.58008993586 63.309 2 0.2054197968679382 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 1723 7337 AEGQRLFSA True H1975_Epitope_Rep2 977.4930438849299 977.49194993586 33.162 2 0.20541217850301038 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'ENST00000569800.5_1_16:69167425-69171817:+|nuORF'] 7822 12940 ATADYICKV True PC9_epitope_Rep5 982.4793679667399 982.47826993586 54.785 2 0.20541171117278575 0.0005366534292154127 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 39354 8254 HLVDEPQNLIK True H1975_Epitope_Rep1 1304.7088503076 1304.7077499358602 36.687 2 0.2054064678643038 0.0005366534292154127 0.9438714419765777 ['CON__P02769'] 128377 9372 VSDRVTVLY True H1975_Epitope_Rep1 1050.57095985246 1050.5698699358602 40.959 2 0.20539932728174143 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 24188 21051 EYTRALFLL True PC9_epitope_Rep2 1124.62299542532 1124.62188993586 86.427 2 0.20539637422410806 0.0005366534292154127 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2'] 105918 16005 SVLDSFLKY True NCI_RA007_Epitope_Rep4 1070.5648118428599 1070.56370993586 69.433 2 0.2053843179760642 0.0005366534292154127 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 89735 7289 REYQELM[Oxidation]SV True H1975_Epitope_Rep2 1169.5386741284499 1169.5375699358601 32.975 2 0.2053708451928883 0.0005366534292154127 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 89501 4617 REQPPTGGNLA True H1975_Epitope_Rep3 1138.57308511078 1138.57198993586 22.882 2 0.20536882713918184 0.0005366534292154127 0.9438714419765777 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 7501 7214 ASEFPGAQHY True H1975_Epitope_Rep3 1105.48287312405 1105.48176993586 32.72 2 0.2053660976914597 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 6939 18618 AQLPALWKA True PC9_epitope_Rep5 996.5756513100799 996.57454993586 76.641 2 0.2053617533378018 0.0005366534292154127 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2', 'ENST00000588777.1_1_19:12986806-12989487:-|nuORF'] 38129 6771 HEQFKATLP True H1975_Epitope_Rep2 1069.55564414149 1069.5545499358602 30.96 2 0.20535594424332376 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 95309 17123 SAFDHFASV True PC9_epitope_Rep1 979.43994568291 979.43884993586 70.687 2 0.20535439052280846 0.0005366534292154127 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 53100 8409 KSDVHLNFY True H1975_Epitope_Rep3 1121.55055876105 1121.54946993586 37.329 2 0.2053528772143113 0.0005366534292154127 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 87781 3094 QVHPDTGISSK True NCI_RA007_Epitope_Rep5 1167.5884008217502 1167.58675490379 17.128 3 0.20535234783005993 0.0005366534292154127 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26', 'ENSG00000146047|ENST00000274764|H2BC1'] 2599 8377 AESLGQYAA True H1975_Epitope_Rep2 908.4239612655999 908.4234149679301 37.175 1 0.2053476247910808 0.0005366534292154127 0.9438714419765777 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 6702 8170 AQATISFPK True NCI_RA007_Epitope_Rep5 961.5232813840499 961.52218993586 38.109 2 0.20533903149771748 0.0005366534292154127 0.9438714419765777 ['ENSG00000094804|ENST00000209728|CDC6'] 68011 16948 LTMEVIRQV True PC9_epitope_Rep5 1087.60596546219 1087.60486993586 70.208 2 0.20529904097641655 0.0005366534292154127 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'NFKBIA|p.L131Wfs*33|1|0.1|ENSG00000100906|chr14:35403306-35403306|G/-|frameshift_variant', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 111038 15621 TLDPQTGLFY True H1975_Epitope_Rep2 1153.5655401188499 1153.56444993586 65.242 2 0.20528310043854794 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 75728 7314 NQWDGTQHGV True PC9_epitope_Rep4 1140.49483479008 1140.49372993586 35.462 2 0.20528006049159284 0.0005366534292154127 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 109040 11999 TEYSFLKEV True NCI_RA007_Epitope_Rep3 1114.55464108198 1114.55354993586 54.323 2 0.20527918140129878 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 53747 12740 KYFDEHYEY True PC9_epitope_Rep1 1292.53496826656 1292.53333490379 53.88 3 0.20527850160422553 0.0005366534292154127 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 114816 19838 TTDFIFNLY True H1975_Epitope_Rep2 1132.54407639828 1132.5429699358601 82.291 2 0.20527623705815326 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 54062 18998 KYLTEGLLQF True PC9_epitope_Rep6 1210.65977485686 1210.6586699358602 85.719 2 0.20527363154075498 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 17701 18332 EHSLPTLGL True PC9_epitope_Rep5 965.51819600361 965.51708993586 75.529 2 0.20527331958141337 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 132025 14546 VYGSFASKL True PC9_epitope_Rep5 970.5123823471799 970.51128993586 60.952 2 0.20527189849454316 0.0005366534292154127 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 52590 15893 KPYNVYITV True PC9_epitope_Rep2 1095.59644632431 1095.5953499358602 66.385 2 0.20523913691696943 0.0005366534292154127 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 172 6200 AAEAEVELSAR True H1975_Epitope_Rep1 1144.5724164044398 1144.5713099358602 28.918 2 0.20523355230251472 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000161618|Q8IZ83-3|ALDH16A1', 'ENSG00000161618|ENST00000293350|ALDH16A1', 'ENST00000599652.5_1_19:49969097-49972327:+|nuORF'] 92337 6082 RQNVAVNEL True NCI_RA007_Epitope_Rep3 1041.55670677065 1041.55560993586 30.906 2 0.2052304608737061 0.0005366534292154127 0.9438714419765777 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX'] 21355 20170 ERLLGNFSL True PC9_epitope_Rep2 1047.57129420563 1047.57018993586 82.996 2 0.20522864826921675 0.0005366534292154127 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 132806 14099 VYSRTFTWL True NCI_RA007_Epitope_Rep4 1171.6025943339098 1171.6014899358602 61.513 2 0.20522776313832805 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 61270 8272 LLDSSQKNLY True H1975_Epitope_Rep1 1179.61355294043 1179.61244993586 36.752 2 0.20522508102635106 0.0005366534292154127 0.9438714419765777 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 30137 15929 FYQPKIQQF True PC9_epitope_Rep4 1197.61824439805 1197.6171499358602 69.198 2 0.2052236705984668 0.0005366534292154127 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 52653 12992 KQFEGTVEI True PC9_epitope_Rep5 1049.53932537101 1049.53822993586 54.983 2 0.20522273907237995 0.0005366534292154127 0.9438714419765777 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant', 'BRCA2|p.L1390Ffs*13|1|0.17|ENSG00000139618|chr13:32338518-32338519|-/T|frameshift_variant'] 4364 18960 AIPVFLEKL True PC9_epitope_Rep6 1028.6270181766 1028.62592993586 85.575 2 0.20521938430132858 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF', 'nc|ENSG00000153827|Q14669-4|TRIP12'] 140869 18261 YYTPITPHL True PC9_epitope_Rep3 1103.56514619603 1103.56404993586 75.449 2 0.20521838670010992 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 47873 7652 IYTSSVNRL True NCI_RA007_Epitope_Rep1 1051.56620882519 1051.5651099358602 33.758 2 0.20521596703785241 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 106467 20272 SVVESVFKL True PC9_epitope_Rep5 1006.5698972232999 1006.56880993586 83.027 2 0.20521397585027293 0.0005366534292154127 0.9438714419765777 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 47247 21109 IYEIIDNSQGF True PC9_epitope_Rep3 1297.6190322436898 1297.61792993586 86.477 2 0.20521168065626427 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 54233 21521 KYPENFFLL True PC9_epitope_Rep2 1169.61209638845 1169.61098993586 88.248 2 0.20520552548776907 0.0005366534292154127 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 15836 4736 EDKYEEEIK True NCI_RA007_Epitope_Rep2 1181.5451985970901 1181.54356490379 23.052 3 0.20520541084197622 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 72623 9336 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep5 1074.57433136118 1074.5732299358601 40.864 2 0.20518858442198767 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 40156 7749 HRDYETATL True PC9_epitope_Rep5 1104.51998690876 1104.5188899358602 34.748 2 0.20518653292745512 0.0005366534292154127 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 91151 18190 RLPETLPSL True PC9_epitope_Rep2 1024.59169529704 1024.5905899358602 75.275 2 0.20518206241683312 0.0005366534292154127 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 86744 19135 QRLETILSL True PC9_epitope_Rep4 1071.62880908175 1071.6277099358601 81.697 2 0.20518191255901239 0.0005366534292154127 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 86835 14564 QRQDIAFAY True PC9_epitope_Rep1 1110.5458077337798 1110.54470993586 60.845 2 0.20515510127061862 0.0005366534292154127 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 41123 20768 HYNSDLNNLLF True PC9_epitope_Rep5 1348.6411646706 1348.64006993586 84.935 2 0.20515253776697018 0.0005366534292154127 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 27824 20962 FQIIQSIRMGM True PC9_epitope_Rep5 1322.6838985130598 1322.6828099358602 85.69 2 0.20515133005200692 0.0005366534292154127 0.9438714419765777 ['ENSG00000120742|ENST00000239944|SERP1', 'ENSG00000151778|ENST00000379179|SERP2'] 115247 13783 TVDEHVWFY True H1975_Epitope_Rep3 1194.53457434374 1194.53346993586 58.32 2 0.20514970453813433 0.0005366534292154127 0.9438714419765777 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 67343 8458 LTDRELEEY True H1975_Epitope_Rep3 1166.54553295026 1166.54442993586 37.518 2 0.20514950881781369 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 97332 13428 SFVNDIFER True H1975_Epitope_Rep3 1125.5454733806098 1125.54436993586 56.921 2 0.20514743766216156 0.0005366534292154127 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 77389 19612 NYLSIFRKF True PC9_epitope_Rep2 1186.6498788795 1186.6487899358601 80.822 2 0.20514648254897344 0.0005366534292154127 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 76484 10813 NTDFYQTSY True H1975_Epitope_Rep1 1137.46146897313 1137.4603699358602 46.556 2 0.20513645283012696 0.0005366534292154127 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 46679 10280 ITVTSEVPFSK True NCI_RA007_Epitope_Rep5 1206.6496040959798 1206.6485099358601 46.172 2 0.20513458026986112 0.0005366534292154127 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22'] 32024 8888 GEVFKTYNV True H1975_Epitope_Rep2 1055.5287606873098 1055.52766993586 39.158 2 0.20513224848382627 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 32323 7814 GGAEGELQALR True H1975_Epitope_Rep1 1099.56218607391 1099.56108993586 35.01 2 0.20512715630210362 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 11938 16122 DHSPDLYSL True PC9_epitope_Rep4 1045.47163973401 1045.4705499358602 69.953 2 0.2051235159271886 0.0005366534292154127 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ENST00000417716.1_1_1:197191903-197192119:+|nuORF'] 133196 4728 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 23.279 2 0.205121454422506 0.0005366534292154127 0.9438714419765777 ['AluSp_dup17171|chr6:42956085-42956345:+|4.405465577973595|0.2092895351215914|4.4|502.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.0483672628645049|0.0949023208327711|3.47|501.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 97013 9196 SEVQYIQEA True H1975_Epitope_Rep1 1065.4978544818498 1065.4967499358602 40.279 2 0.205100427158403 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 22146 9217 ESYSVYVYK True NCI_RA007_Epitope_Rep2 1136.5389910178399 1136.5378899358602 40.462 2 0.20509603200748697 0.0005366534292154127 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 113752 20048 TRDPLVIEL True PC9_epitope_Rep5 1054.60225998074 1054.60116993586 82.168 2 0.20508339181959764 0.0005366534292154127 0.9438714419765777 ['ENSG00000134285|ENST00000550765|FKBP11', 'ENST00000551694.5_1_12:49318004-49319277:-|nuORF', 'nc|ENSG00000134285|Q9NYL4-2|FKBP11', 'ENST00000553027.1_1_12:49318338-49318461:-|nuORF', 'ENST00000546671.5_1_12:49317517-49318461:-|nuORF'] 76656 22842 NTIPLFVQL True PC9_epitope_Rep2 1043.60153170475 1043.6004299358601 93.352 2 0.20507925463781881 0.0005366534292154127 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'JUP|p.R582Q|1|0.15|ENSG00000173801|chr17:41758427-41758427|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 48598 7708 KEIEGIFHA True H1975_Epitope_Rep1 1042.54474510462 1042.54364993586 34.611 2 0.2050610822374604 0.0005366534292154127 0.9438714419765777 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1'] 83200 20137 PYYSKFILI True PC9_epitope_Rep4 1142.6375828603 1142.63648993586 85.592 2 0.2050591595989245 0.0005366534292154127 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5'] 49338 9168 KIDENQLMY True H1975_Epitope_Rep3 1152.54851015572 1152.54740993586 40.254 2 0.20505496252978456 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN', 'ERBIN|p.D635Mfs*50|1|0.47|ENSG00000112851|chr5:66048775-66048775|A/-|frameshift_variant', 'ERBIN|p.G1049Afs*21|1|0.18|ENSG00000112851|chr5:66054463-66054463|G/-|frameshift_variant'] 28013 20642 FQYESKVFYL True PC9_epitope_Rep1 1322.6546894764197 1322.65358993586 84.221 2 0.2050549603590739 0.0005366534292154127 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 136629 10009 YIDEQFERY True H1975_Epitope_Rep3 1261.5615173675699 1261.5604299358602 43.538 2 0.2050444746625958 0.0005366534292154127 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 114015 14717 TRMPDGPVAL True PC9_epitope_Rep1 1055.54336520563 1055.54226993586 61.431 2 0.20504227186368287 0.0005366534292154127 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 53951 20648 KYITDWQNVF True PC9_epitope_Rep2 1312.6451874218799 1312.6440899358602 84.859 2 0.20502685613041494 0.0005366534292154127 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 53450 11203 KVIDPATATSV True PC9_epitope_Rep3 1100.607739284 1100.60664993586 48.098 2 0.20502622368158538 0.0005366534292154127 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 91293 18345 RLYDGLFKVI True PC9_epitope_Rep6 1222.70739375562 1222.70575490379 83.206 3 0.20502320226963738 0.0005366534292154127 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 140488 21003 YYIFIPSKF True PC9_epitope_Rep2 1176.6219327961599 1176.62082993586 86.241 2 0.20502266924887408 0.0005366534292154127 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 137670 16297 YM[Oxidation]DDYIFTY True H1975_Epitope_Rep2 1245.48999260053 1245.48888993586 67.906 2 0.2050134871624337 0.0005366534292154127 0.9438714419765777 ['ENSG00000157483|ENST00000288235|MYO1E'] 54236 21712 KYPENFFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 88.809 2 0.20501133923643902 0.0005366534292154127 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 52335 22226 KPFDLVIPFA True PC9_epitope_Rep5 1145.64848189717 1145.64738993586 90.498 2 0.2049973459174596 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 23736 19990 EYIPKWEQF True PC9_epitope_Rep3 1238.5971746003 1238.5960699358602 82.138 2 0.20499522040498083 0.0005366534292154127 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 47246 21216 IYEIIDNSQGF True PC9_epitope_Rep1 1297.6190322436898 1297.61792993586 86.432 2 0.20499495343598487 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 120389 12113 VFSEPRAVFY True H1975_Epitope_Rep2 1213.6131590176099 1213.61206993586 51.676 2 0.20499402579871015 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 72714 20891 MYPYIFHVL True PC9_epitope_Rep4 1181.59433814933 1181.59324993586 88.515 2 0.20499276764197763 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 70305 20253 LYPEVFEKF True PC9_epitope_Rep2 1170.5961119711399 1170.5950099358602 83.324 2 0.20499112135435874 0.0005366534292154127 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 127147 14284 VQDRFEVNV True PC9_epitope_Rep1 1104.55637241748 1104.55526993586 59.769 2 0.20498039003085364 0.0005366534292154127 0.9438714419765777 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14519750-14520297:-|nuORF'] 70579 22315 LYYDAIWHF True PC9_epitope_Rep1 1226.5760452328998 1226.57494993586 90.646 2 0.20497916741432556 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 61867 11199 LLLEPYNKY True H1975_Epitope_Rep1 1151.62266107215 1151.6215699358602 48.046 2 0.20497063896578954 0.0005366534292154127 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 43320 9168 IHEPEPHIL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 45.392 2 0.20496734136385156 0.0005366534292154127 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 21593 4350 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 23.815 2 0.20496557214074224 0.0005366534292154127 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 23992 9777 EYPDRIM[Oxidation]NTF True NCI_RA007_Epitope_Rep5 1300.57578791316 1300.57468993586 44.254 2 0.2049516554414229 0.0005366534292154127 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 135474 7918 YEDATKITV True H1975_Epitope_Rep3 1038.5233409537 1038.5222499358601 35.426 2 0.20495113731142042 0.0005366534292154127 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 77317 13080 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.6069699358602 55.589 2 0.2049500288729562 0.0005366534292154127 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 23756 12331 EYIQKNVQL True PC9_epitope_Rep1 1133.6080736371698 1133.6069699358602 52.288 2 0.204947832962964 0.0005366534292154127 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 137178 12767 YLDSIPPGQY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 54.212 2 0.20494014240514552 0.0005366534292154127 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 116988 15831 TYPYLQHEI True PC9_epitope_Rep1 1162.5658744720201 1162.56476993586 65.71 2 0.2049383357598142 0.0005366534292154127 0.9438714419765777 ['PMEPA1|p.S209Qfs*3|1|0.15|ENSG00000124225|chr20:57652292-57652293|-/G|frameshift_variant', 'nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 96414 6651 SEIDPNPDQSA True H1975_Epitope_Rep2 1171.49931103383 1171.4982099358601 30.491 2 0.20493767642072266 0.0005366534292154127 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 140374 15569 YYEKQFPEI True PC9_epitope_Rep4 1215.5811901829898 1215.58008993586 67.807 2 0.20493434373746924 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'nc|ENSG00000141027|O75376-3|NCOR1'] 60334 19535 LIGEFLEKV True PC9_epitope_Rep4 1046.60119735158 1046.60010993586 83.263 2 0.2049328339202187 0.0005366534292154127 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 28654 15566 FSSPHLVQV True PC9_epitope_Rep1 1012.5341804209198 1012.53308993586 64.698 2 0.20492534233544696 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 6942 21818 AQLQDFDWQV True PC9_epitope_Rep3 1248.57750178488 1248.57640993586 89.221 2 0.2049249193937052 0.0005366534292154127 0.9438714419765777 ['ENSG00000169019|ENST00000381571|COMMD8'] 104244 9504 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4603699358602 41.526 2 0.20491981203169138 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 36409 21974 GVIDLIFEKA True PC9_epitope_Rep1 1103.62266107215 1103.6215699358602 89.344 2 0.20491459524751696 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 93506 8523 RSLDNFFAK True NCI_RA007_Epitope_Rep3 1096.5665431783598 1096.5654499358602 40.596 2 0.20491080494519473 0.0005366534292154127 0.9438714419765777 ['ENSG00000091527|ENST00000264993|CDV3', 'nc|ENSG00000091527|Q9UKY7-2|CDV3'] 23819 19798 EYLIVFPKL True PC9_epitope_Rep6 1120.6532329244399 1120.65212993586 88.811 2 0.20489801010961625 0.0005366534292154127 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 76639 7403 NTIDPSHPM True PC9_epitope_Rep6 1010.4491304676201 1010.44802993586 37.695 2 0.2048965193528227 0.0005366534292154127 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 29279 10030 FVDKNNDLLY True H1975_Epitope_Rep1 1239.61355294043 1239.61244993586 43.519 2 0.2048951645769072 0.0005366534292154127 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 31288 7256 GDVENIEVVQK True H1975_Epitope_Rep1 1228.6299312805597 1228.62882993586 32.921 2 0.20489043093900994 0.0005366534292154127 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 26708 7920 FLDESRSTQY True H1975_Epitope_Rep2 1244.567331024 1244.56622993586 35.412 2 0.20488897750918292 0.0005366534292154127 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 74347 6454 NIQGITKPAIR True NCI_RA007_Epitope_Rep1 1209.7193554216499 1209.71770490379 29.127 3 0.20487406301396507 0.0005366534292154127 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 75817 18889 NRDELELEL True PC9_epitope_Rep5 1129.5615173675699 1129.5604299358602 77.676 2 0.20486816311770717 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 77410 19171 NYLVRINEI True PC9_epitope_Rep1 1132.62405805448 1132.62296993586 78.535 2 0.20486517549686184 0.0005366534292154127 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant'] 83484 16523 QDGQFSVLFTK True H1975_Epitope_Rep3 1268.6401020414398 1268.63900993586 69.052 2 0.20485448585044294 0.0005366534292154127 0.9438714419765777 ['CON__P12763'] 26577 5456 FKDDYPSSPPK True NCI_RA007_Epitope_Rep2 1279.6084675599898 1279.60681490379 25.842 3 0.20484235624651284 0.0005366534292154127 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000568209.5_1_16:1359737-1370175:+|nuORF', 'ENST00000568288.5_1_16:1359654-1370175:+|nuORF', 'ENST00000566159.1_1_16:1365264-1365732:+|nuORF'] 138663 20936 YRSEGWWTL True PC9_epitope_Rep3 1196.5614577979197 1196.56036993586 85.808 2 0.20484054668748178 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 23562 19693 EYALLYHTL True PC9_epitope_Rep2 1121.5757108797302 1121.57460993586 81.135 2 0.20483201593449257 0.0005366534292154127 0.9438714419765777 ['AOC1|p.L708Wfs*7|1|0.34|ENSG00000002726|chr7:150861073-150861073|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 90544 7922 RKFLDGNEL True NCI_RA007_Epitope_Rep4 1090.5771078620598 1090.5760099358602 37.216 2 0.20483188605241848 0.0005366534292154127 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 67393 13420 LTDYDIRFY True H1975_Epitope_Rep3 1204.57643915572 1204.57534993586 56.89 2 0.2048242864689303 0.0005366534292154127 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1'] 26149 18927 FHNELLTQL True PC9_epitope_Rep2 1113.5818588893299 1113.5807699358602 78.167 2 0.20481965957093928 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 18779 10998 ELDRFMHYY True H1975_Epitope_Rep2 1272.55974354576 1272.55864993586 47.33 2 0.20481203737640802 0.0005366534292154127 0.9438714419765777 ['ENSG00000001629|ENST00000265742|ANKIB1', 'ENST00000422095.1_3_7:92000906-92025787:+|nuORF'] 84827 11797 QHLQATGVSL True PC9_epitope_Rep1 1052.56145779792 1052.56036993586 50.246 2 0.20480939972329873 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 100651 5960 SLQSVAEER True NCI_RA007_Epitope_Rep2 1017.5090878718898 1017.50798993586 27.792 2 0.20480209349381903 0.0005366534292154127 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 116985 14513 TYPQLEGFKF True NCI_RA007_Epitope_Rep4 1228.6128246644396 1228.61172993586 63.188 2 0.20480206858830668 0.0005366534292154127 0.9438714419765777 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 94856 9826 RYMPQNPHII True PC9_epitope_Rep6 1267.6495616096697 1267.64791490379 48.259 3 0.20480090914076923 0.0005366534292154127 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 39809 14126 HQELFPHSL True PC9_epitope_Rep5 1106.55089311422 1106.5497899358602 59.346 2 0.2047928491637566 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 136354 7379 YHDEADQSAL True PC9_epitope_Rep1 1147.47818166643 1147.47708993586 33.196 2 0.20479093829179618 0.0005366534292154127 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 76494 7865 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.5822099358602 35.198 2 0.2047674904176993 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 94500 14731 RYIANTVEL True PC9_epitope_Rep1 1077.58185888933 1077.5807699358602 61.485 2 0.2047557446294344 0.0005366534292154127 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 138763 13518 YSDAFLNDSY True H1975_Epitope_Rep3 1193.48768372097 1193.4871749679298 57.276 1 0.20475259641284063 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 137980 12136 YQAEHLLQT True PC9_epitope_Rep1 1101.5454733806098 1101.54436993586 51.543 2 0.2047525103557508 0.0005366534292154127 0.9438714419765777 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 28175 19847 FRNIPGITL True PC9_epitope_Rep3 1029.5971150306498 1029.5960099358601 81.577 2 0.20474707740437045 0.0005366534292154127 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 23971 19165 EYPDRIMNTF True PC9_epitope_Rep1 1284.5808729131597 1284.5797699358602 78.512 2 0.20472587231898515 0.0005366534292154127 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 36420 19070 GVIEKLLTS True PC9_epitope_Rep2 958.5698972233 958.56880993586 78.717 2 0.20471876740983233 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 84595 18042 QHDPETSVLVL True PC9_epitope_Rep3 1236.635016661 1236.6339099358602 74.599 2 0.2047122961323921 0.0005366534292154127 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 53078 8566 KSDLQPPNYY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 37.902 2 0.2047064638965384 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1'] 108309 6779 TEDFSNPSA True H1975_Epitope_Rep2 966.3930550601399 966.3925049679301 30.991 1 0.20470147962730317 0.0005366534292154127 0.9438714419765777 ['ENSG00000166024|ENST00000298999|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2|R3HCC1L'] 119354 4844 VENIQRVAA True NCI_RA007_Epitope_Rep3 998.5508931142198 998.54978993586 26.039 2 0.20469852709714395 0.0005366534292154127 0.9438714419765777 ['ENSG00000173801|ENST00000393931|JUP'] 9125 7453 AVLPTPVTK True NCI_RA007_Epitope_Rep4 924.56441792004 924.56332993586 35.311 2 0.20469848926730336 0.0005366534292154127 0.9438714419765777 ['ENSG00000197724|ENST00000359246|PHF2'] 9066 14701 AVIVWSFMK True NCI_RA007_Epitope_Rep3 1079.58377346563 1079.5826699358602 65.224 2 0.2046939694763201 0.0005366534292154127 0.9438714419765777 ['ENST00000514133.1_1_4:52895917-52895998:-|nuORF'] 10075 5764 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep3 1119.5171508382302 1119.51604993586 29.655 2 0.20469274814748242 0.0005366534292154127 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 81796 11677 PSEYDTPLY True H1975_Epitope_Rep2 1083.47605640811 1083.4749499358602 49.988 2 0.2046800537358788 0.0005366534292154127 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3', 'SETD3|p.Y313Lfs*18|1|0.19|ENSG00000183576|chr14:99405358-99405359|-/A|frameshift_variant'] 31648 7970 GEHGLIIRV True NCI_RA007_Epitope_Rep5 992.57671393924 992.57560993586 37.344 2 0.20467808358012143 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 94628 7820 RYLDKTEQW True NCI_RA007_Epitope_Rep2 1237.6091362663299 1237.60750490379 35.048 3 0.20467127520399922 0.0005366534292154127 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 116782 20240 TYLPAPEGLKF True PC9_epitope_Rep5 1234.65977485686 1234.6586699358602 82.902 2 0.20466694194309568 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 103335 13328 SQVDVAVKI True PC9_epitope_Rep5 957.5494961318899 957.54838993586 56.279 2 0.20466652148002698 0.0005366534292154127 0.9438714419765777 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000486256.5_1_7:6777360-6777438:+|nuORF'] 39806 12526 HQELFPHSL True PC9_epitope_Rep2 1106.55089311422 1106.5497899358602 53.488 2 0.20466643211707627 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 14972 12326 DYSLDEFEANK True NCI_RA007_Epitope_Rep1 1329.57247597409 1329.57136993586 51.916 2 0.20466350984039888 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'ENST00000485212.1_1_10:95084294-95089482:-|nuORF'] 59109 9964 LGEHNIDVLE True NCI_RA007_Epitope_Rep4 1137.56660274801 1137.56550993586 45.171 2 0.20465950089537402 0.0005366534292154127 0.9438714419765777 ['CON__P00761'] 64579 14034 LRDSFQQVV True PC9_epitope_Rep1 1090.57710786206 1090.5760099358602 58.82 2 0.20463780732011563 0.0005366534292154127 0.9438714419765777 ['ARNT|p.R595Pfs*9|1|0.14|ENSG00000143437|chr1:150816806-150816807|-/G|frameshift_variant', 'nc|ENSG00000143437|P27540-2|ARNT', 'nc|ENSG00000143437|P27540-3|ARNT', 'nc|ENSG00000143437|P27540-4|ARNT', 'ENSG00000143437|ENST00000358595|ARNT'] 22230 13393 ETDLLDIRSEY True H1975_Epitope_Rep2 1352.64597526752 1352.6454749679299 56.651 1 0.20463475467090642 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 9874 18680 AYMPHTFFI True PC9_epitope_Rep6 1125.53173789277 1125.53064993586 84.496 2 0.20463071044701242 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 106762 13741 SYFPEITHI True NCI_RA007_Epitope_Rep4 1105.54441075145 1105.5433099358602 60.081 2 0.2046254014392743 0.0005366534292154127 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 88016 6540 QVSPEAGVQKV True PC9_epitope_Rep4 1140.6138872935999 1140.61278993586 32.283 2 0.20462511044054169 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 4187 10987 AIDEDVLRY True H1975_Epitope_Rep3 1092.54513902744 1092.5440499358601 47.35 2 0.20462396020450768 0.0005366534292154127 0.9438714419765777 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 128344 13896 VSDMVEDLY True H1975_Epitope_Rep2 1069.4637774722498 1069.46327496793 58.596 1 0.20462168950478943 0.0005366534292154127 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 21342 20047 ERLGQFMTL True PC9_epitope_Rep5 1093.55901526977 1093.5579099358602 82.164 2 0.20461633275332772 0.0005366534292154127 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 47887 8519 IYTSSVNRL True PC9_epitope_Rep6 1051.56620882519 1051.5651099358602 42.513 2 0.20460433281484663 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 26527 20669 FIVDPVSNL True PC9_epitope_Rep4 1002.53859709502 1002.53750993586 87.661 2 0.20458631305857533 0.0005366534292154127 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 129199 11114 VTDHLGVVYY True H1975_Epitope_Rep3 1164.58152453616 1164.5804299358601 47.845 2 0.20457454668206174 0.0005366534292154127 0.9438714419765777 ['ENST00000473051.1_1_10:74095570-74096546:-|nuORF', 'ENSG00000148719|ENST00000444643|DNAJB12', 'nc|ENSG00000148719|Q9NXW2-2|DNAJB12'] 84691 17977 QHFDSVMQL True PC9_epitope_Rep3 1103.5069796969099 1103.50588993586 74.352 2 0.20457239126062 0.0005366534292154127 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 23817 21849 EYLIVFPKL True PC9_epitope_Rep3 1120.6532329244399 1120.65212993586 89.344 2 0.20455632135970628 0.0005366534292154127 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 7103 7412 AQYEDIANR True PC9_epitope_Rep5 1078.5043368446197 1078.5032299358602 33.465 2 0.2045359935161668 0.0005366534292154127 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 140484 15758 YYIFIPSKF True NCI_RA007_Epitope_Rep4 1176.6219327961599 1176.62082993586 68.436 2 0.20452614248734224 0.0005366534292154127 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 13748 15057 DQLIYNLLK True H1975_Epitope_Rep3 1118.63356010902 1118.6324699358602 63.31 2 0.20451661291544207 0.0005366534292154127 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000469976.2_1_11:18418389-18418551:+|nuORF'] 88256 18665 QYESKVFYL True PC9_epitope_Rep5 1175.5862755634298 1175.5851699358602 76.818 2 0.20449417905947279 0.0006279434850863422 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 89753 6467 REYWNEQSA True H1975_Epitope_Rep2 1181.51015050105 1181.50904993586 29.792 2 0.2044823710991426 0.0006279434850863422 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 74106 16491 NHVSSPFEL True PC9_epitope_Rep5 1028.4927095317598 1028.4916099358602 68.432 2 0.20448163111405612 0.0006279434850863422 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 67351 5299 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 25.438 2 0.2044812389639114 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 140540 19459 YYLNDLDRI True PC9_epitope_Rep2 1183.5873381925899 1183.58624993586 80.23 2 0.20448112670487928 0.0006279434850863422 0.9438714419765777 ['ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1', 'ENSG00000065135|ENST00000369851|GNAI3', 'ENSG00000214415|ENST00000398291|GNAT3'] 45117 19932 IQTAVRLLL True PC9_epitope_Rep5 1025.6597152872098 1025.65860993586 81.725 2 0.2044775134322827 0.0006279434850863422 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC4|p.R93G|1|0.26|ENSG00000278588|chr6:26123628-26123628|T/C|missense_variant', 'H2BC4|p.E94D|1|0.3|ENSG00000278588|chr6:26123623-26123623|C/A|missense_variant', 'H2BC7|p.E94D|1|0.38|ENSG00000277224|chr6:26199840-26199840|G/C|missense_variant', 'H2BC21|p.P104L|1|0.5|ENSG00000184678|chr1:149886330-149886330|G/A|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 56672 7546 LEAANGELEVK True NCI_RA007_Epitope_Rep2 1171.6084675599898 1171.60736993586 33.978 2 0.20446865120004634 0.0006279434850863422 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 48841 9630 KESDIVLYA True H1975_Epitope_Rep3 1036.5440763982797 1036.5429699358601 42.058 2 0.2044613020714492 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 73759 15977 NHASLISAL True PC9_epitope_Rep1 924.50288029264 924.50178993586 66.265 2 0.20445993719291838 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 93634 9774 RTEFNLNQY True H1975_Epitope_Rep2 1183.56218607391 1183.56108993586 42.582 2 0.20444902275710253 0.0006279434850863422 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'COL12A1|p.D221Gfs*4|1|0.16|ENSG00000111799|chr6:75189378-75189379|-/C|frameshift_variant'] 88270 16798 QYFPKAPEF True PC9_epitope_Rep4 1125.5494961318898 1125.54838993586 72.585 2 0.2044457900441077 0.0006279434850863422 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 43396 11059 IHSENFQTL True PC9_epitope_Rep2 1087.5298233164701 1087.5287299358602 47.856 2 0.20443564276931536 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 133523 16679 WHHTFYNEL True PC9_epitope_Rep1 1245.55670677065 1245.55560993586 68.985 2 0.20442436056256444 0.0006279434850863422 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 88917 7960 REDDLNVSV True H1975_Epitope_Rep1 1045.50400249145 1045.50290993586 35.567 2 0.20441275934327072 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'BBS9|p.V734*|1|0.27|ENSG00000122507|chr7:33505546-33505546|G/-|frameshift_variant', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9'] 103400 13555 SQWSLQHEI True PC9_epitope_Rep6 1126.54072235334 1126.5396299358601 63.871 2 0.20440944085688137 0.0006279434850863422 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L'] 134509 20269 WVDPNSPVL True PC9_epitope_Rep3 1025.51819600361 1025.5170899358602 83.221 2 0.20439437887280795 0.0006279434850863422 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 14224 5444 DSYESYGNSR True NCI_RA007_Epitope_Rep1 1176.4683452587199 1176.46724993586 25.248 2 0.20439153558951773 0.0006279434850863422 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 6711 16426 AQDEHLITF True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 68.426 2 0.2043886637281443 0.0006279434850863422 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 11828 16905 DHMRFISEL True PC9_epitope_Rep2 1146.54917886206 1146.54754490379 70.269 3 0.2043852130112553 0.0006279434850863422 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 74252 15350 NIDYPVLY True H1975_Epitope_Rep2 995.49639792987 995.49530993586 64.202 2 0.20438415488290043 0.0006279434850863422 0.9438714419765777 ['ENST00000593518.1_1_19:4007758-4017708:+|nuORF', 'ENST00000599999.5_1_19:4007758-4028181:+|nuORF', 'ENSG00000105229|ENST00000262971|PIAS4'] 127477 7972 VQTEVNREL True PC9_epitope_Rep3 1086.56693710118 1086.5658499358601 35.642 2 0.20436992835841378 0.0006279434850863422 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 39698 10066 HPTWALKEA True PC9_epitope_Rep3 1051.5450794577898 1051.54398993586 43.673 2 0.20436718228118408 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 31088 10594 GAYKYIQEL True H1975_Epitope_Rep1 1083.56006081559 1083.5589699358602 45.703 2 0.20436431852732212 0.0006279434850863422 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 86727 9787 QRLAEPSQL True PC9_epitope_Rep1 1040.56145779792 1040.56036993586 42.507 2 0.20435111679165516 0.0006279434850863422 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 98106 19766 SIAGIFKEV True PC9_epitope_Rep3 962.54368247546 962.54258993586 81.258 2 0.20435090216340243 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 114165 8436 TRSTFSTNY True PC9_epitope_Rep3 1075.49343780775 1075.4923499358601 37.413 2 0.20431812017612971 0.0006279434850863422 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 77401 12245 NYLVLPNRI True NCI_RA007_Epitope_Rep3 1100.63422881536 1100.63312993586 55.313 2 0.20430934075828433 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 95700 11625 SAYEFYHAL True NCI_RA007_Epitope_Rep3 1099.49746055903 1099.49636993586 52.847 2 0.20430155338103892 0.0006279434850863422 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 76317 5625 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 26.636 2 0.20429602083386064 0.0006279434850863422 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 29042 19657 FTLSHITQL True PC9_epitope_Rep1 1058.5760452329 1058.57494993586 80.436 2 0.2042927271438803 0.0006279434850863422 0.9438714419765777 ['ENSG00000148484|ENST00000345264|RSU1'] 90885 13622 RLASYLDKV True PC9_epitope_Rep5 1063.60259433391 1063.6014899358602 57.42 2 0.20429139382321237 0.0006279434850863422 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P05784', 'ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 93804 19703 RVADILTQL True PC9_epitope_Rep2 1027.60259433391 1027.6014899358602 81.175 2 0.2042895709306961 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 88427 22428 QYSPLLAAF True PC9_epitope_Rep3 1008.5280324113198 1008.52692993586 91.546 2 0.20427511406500326 0.0006279434850863422 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 72261 19657 MSDLLSPLLY True H1975_Epitope_Rep1 1150.59439771898 1150.5933099358601 81.824 2 0.2042471363048272 0.0006279434850863422 0.9438714419765777 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 9838 20031 AYLLNLNHL True PC9_epitope_Rep2 1069.59202965021 1069.59092993586 82.453 2 0.2042456592582221 0.0006279434850863422 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 67238 16337 LTDLVDDNYF True H1975_Epitope_Rep1 1213.5502839775302 1213.54977496793 68.197 1 0.20423631644313192 0.0006279434850863422 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 61866 11051 LLLEPYNKY True H1975_Epitope_Rep1 1151.62266107215 1151.6215699358602 47.469 2 0.2042310524378367 0.0006279434850863422 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 40731 13120 HTVEDLVKV True PC9_epitope_Rep3 1038.5709598524597 1038.5698699358602 55.487 2 0.20422877762584665 0.0006279434850863422 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 136326 8811 YHADIYDKV True PC9_epitope_Rep2 1122.53457434374 1122.5329349037902 39.245 3 0.20422119227196098 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 45226 10196 IRLENEIQTY True NCI_RA007_Epitope_Rep5 1277.66156576201 1277.6604699358602 45.85 2 0.20421732851691118 0.0006279434850863422 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 140589 16813 YYLTPDGQRF True PC9_epitope_Rep1 1258.59823722946 1258.5971499358602 69.497 2 0.20421109616632965 0.0006279434850863422 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 16320 20276 EEIVQFFQGL True H1975_Epitope_Rep3 1208.6077392839998 1208.60664993586 84.792 2 0.2042035293424302 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3'] 12140 11307 DIISDTSGDFR True H1975_Epitope_Rep3 1224.5622456435601 1224.5611499358602 48.598 2 0.20419858606237243 0.0006279434850863422 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 138758 13537 YSDAFLNDSY True H1975_Epitope_Rep1 1193.48768372097 1193.4871749679298 57.191 1 0.2041887645434982 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 138921 5467 YSEEECRQY True H1975_Epitope_Rep2 1205.46590273057 1205.46480993586 26.055 2 0.20418568911447452 0.0006279434850863422 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 89007 11023 REEDFYYTEV True H1975_Epitope_Rep1 1349.5775613545297 1349.5764699358601 47.361 2 0.2041665623049295 0.0006279434850863422 0.9438714419765777 ['ENSG00000186918|ENST00000344423|ZNF395'] 74742 22000 NLLKLIAEV True PC9_epitope_Rep5 1011.6328318330299 1011.63172993586 89.648 2 0.20415721123828806 0.0006279434850863422 0.9438714419765777 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 20989 13878 ERALQQYTL True PC9_epitope_Rep5 1120.5876725457601 1120.58656993586 58.401 2 0.20415586769034147 0.0006279434850863422 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 25325 6971 FEERSGVVP True H1975_Epitope_Rep2 1018.5083595958997 1018.50726993586 31.735 2 0.20415076623467435 0.0006279434850863422 0.9438714419765777 ['ENSG00000170584|ENST00000302764|NUDCD2', 'NUDCD2|p.G57Afs*15|2|0.32|ENSG00000170584|chr5:163459881-163459881|C/-|frameshift_variant'] 7496 10322 ASEFGNHYLY True H1975_Epitope_Rep2 1199.52473793603 1199.52364993586 44.712 2 0.20414971867433476 0.0006279434850863422 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3'] 98934 15052 SIYNGDMEKI True PC9_epitope_Rep1 1168.5434247752798 1168.5423299358602 62.715 2 0.20413515677958471 0.0006279434850863422 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 106913 18462 SYIRPEDIVNF True PC9_epitope_Rep6 1351.67721582615 1351.67610993586 83.654 2 0.20411799972547007 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A', 'ENST00000463015.1_1_1:202977868-202984294:+|nuORF'] 133017 16158 VYVQHPITF True PC9_epitope_Rep3 1102.5811306133398 1102.58002993586 67.297 2 0.20411001263162198 0.0006279434850863422 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 114019 14896 TRMPDGPVAL True PC9_epitope_Rep3 1055.54336520563 1055.54226993586 62.433 2 0.20410776787168672 0.0006279434850863422 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 47352 10567 IYHNPTANSF True PC9_epitope_Rep5 1162.54072235334 1162.5396299358601 45.635 2 0.2041014322226063 0.0006279434850863422 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 120109 13010 VFIDKQTNL True PC9_epitope_Rep5 1076.5866099166 1076.58550993586 55.05 2 0.20409062410051343 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 76364 13421 NSFVNDIFER True H1975_Epitope_Rep3 1239.5884008217497 1239.58730993586 56.894 2 0.204082015941448 0.0006279434850863422 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 18919 12038 ELERLTSLY True H1975_Epitope_Rep2 1122.5920892198599 1122.59098993586 51.385 2 0.2040753124210084 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000164031|Q8TBM8-2|DNAJB14', 'ENSG00000164031|ENST00000442697|DNAJB14'] 53700 20653 KYDEIFYNL True PC9_epitope_Rep1 1203.5811901829898 1203.58008993586 84.263 2 0.20406966637903526 0.0006279434850863422 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 67347 6082 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep1 1056.49099566004 1056.4898899358602 28.461 2 0.20406811274299302 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 117146 16211 TYSPALNKM[Oxidation]F True PC9_epitope_Rep2 1186.5692459807399 1186.5681499358602 67.603 2 0.2040671773859817 0.0006279434850863422 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 26588 7160 FKDLGEENFK True NCI_RA007_Epitope_Rep4 1225.5979028762897 1225.5962549037902 34.164 3 0.20405890745992827 0.0006279434850863422 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 52322 12061 KPANVFITA True PC9_epitope_Rep5 959.54401682863 959.54290993586 51.388 2 0.20405648659528583 0.0006279434850863422 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 138285 13495 YQYPRPLLI True H1975_Epitope_Rep2 1161.6546299067697 1161.6535299358602 57.041 2 0.2040486341355278 0.0006279434850863422 0.9438714419765777 ['ENSG00000160991|ENST00000495936|ORAI2'] 71906 11389 MPQSGTGVSV True PC9_epitope_Rep3 961.45388149489 961.45278993586 48.81 2 0.20404604754808994 0.0006279434850863422 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 113726 7814 TRDEVDATL True PC9_epitope_Rep4 1018.4931034545799 1018.49200993586 37.46 2 0.20404343040315734 0.0006279434850863422 0.9438714419765777 ['ENST00000521795.1_1_8:120865268-120868035:-|nuORF', 'ENSG00000136982|ENST00000313655|DSCC1'] 23576 18694 EYDLIVHQL True PC9_epitope_Rep4 1128.58152453616 1128.5804299358601 79.987 2 0.20403891954585385 0.0006279434850863422 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 9157 3978 AVNAHSNILK True NCI_RA007_Epitope_Rep4 1065.59309227937 1065.59198993586 21.546 2 0.2040376160257479 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF', 'ENST00000490238.5_1_2:86389097-86393741:-|nuORF', 'ENST00000435590.1_1_21:46097057-46097849:-|nuORF'] 133199 5006 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 24.339 2 0.20402489118487652 0.0006279434850863422 0.9438714419765777 ['AluSp_dup17171|chr6:42956085-42956345:+|4.405465577973595|0.2092895351215914|4.4|502.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.0483672628645049|0.0949023208327711|3.47|501.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 54072 22813 KYLVIGDLLF True PC9_epitope_Rep5 1179.69034670915 1179.68924993586 92.743 2 0.2040231597651641 0.0006279434850863422 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 2598 8237 AESLGQYAA True H1975_Epitope_Rep2 908.4239612655999 908.4234149679301 36.636 1 0.2040186571491526 0.0006279434850863422 0.9438714419765777 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 27533 6160 FPGYDSESK True H1975_Epitope_Rep3 1028.4450906329998 1028.4439899358601 28.707 2 0.20401476331277157 0.0006279434850863422 0.9438714419765777 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF', 'ENST00000444235.1_1_2:174736655-174736751:-|nuORF', 'ENST00000494197.1_1_5:31847735-31848014:+|nuORF', 'ENSG00000122406|ENST00000370321|RPL5'] 96731 8787 SEQFTAM[Oxidation]FR True NCI_RA007_Epitope_Rep2 1131.5018946969099 1131.5007899358602 38.826 2 0.20400599147124898 0.0006279434850863422 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 31224 10773 GDLGIEIPAEK True NCI_RA007_Epitope_Rep5 1140.60265390356 1140.60154993586 48.073 2 0.2040057115071099 0.0006279434850863422 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 64210 18303 LQIEDFEARIA True PC9_epitope_Rep6 1303.67721582615 1303.67610993586 83.046 2 0.2039981120999681 0.0006279434850863422 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 45222 13903 IRKPYIWEY True PC9_epitope_Rep6 1266.67609362734 1266.6744449037901 65.316 3 0.20399662167852395 0.0006279434850863422 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 48977 18102 KFAEEFYSF True PC9_epitope_Rep6 1166.5284263341398 1166.52732993586 82.266 2 0.20399338028271036 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 140416 20479 YYFDSYAHF True PC9_epitope_Rep5 1211.4923751785898 1211.4912699358601 83.811 2 0.20399306347052554 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.E343Kfs*18|1|0.21|ENSG00000111218|chr12:3592277-3592277|G/-|frameshift_variant', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8'] 13940 14233 DRIDENYSL True PC9_epitope_Rep5 1123.51456717515 1123.51346993586 59.752 2 0.20397733958138442 0.0006279434850863422 0.9438714419765777 ['ENSG00000107651|ENST00000369075|SEC23IP', 'nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP', 'ENST00000475542.1_1_10:121689169-121691647:+|nuORF'] 32636 7837 GHFQGEIKL True NCI_RA007_Epitope_Rep4 1027.5450794577898 1027.54398993586 36.844 2 0.20397614380485343 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D', 'nc|ENSG00000168918|Q92835-3|INPP5D'] 11719 17721 DHFRLGSVL True PC9_epitope_Rep5 1042.55597849466 1042.55488993586 73.18 2 0.20397361393451663 0.0006279434850863422 0.9438714419765777 ['ENSG00000158435|ENST00000289382|CNOT11'] 54450 19697 KYVENFGLI True PC9_epitope_Rep5 1081.5807962601698 1081.5796899358602 80.816 2 0.20396972815946085 0.0006279434850863422 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2', 'ENST00000561636.2_1_15:43423309-43423531:+|nuORF'] 44099 11855 ILMEHIHKL True PC9_epitope_Rep5 1132.64268532408 1132.64104490379 50.598 3 0.2039615455658459 0.0006279434850863422 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 135275 12620 YAYRDAVFL True H1975_Epitope_Rep2 1116.56039516876 1116.55928993586 53.641 2 0.20395982949090113 0.0006279434850863422 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000525495.6_2_17:45219385-45266538:-|nuORF', 'ENST00000528147.1_1_17:45258889-45266538:-|nuORF'] 25835 18449 FGFEITHEV True PC9_epitope_Rep4 1077.51311062317 1077.51200993586 79.034 2 0.20395608923013772 0.0006279434850863422 0.9438714419765777 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 94079 15590 RVVDYLTKL True PC9_epitope_Rep4 1105.64954452633 1105.64844993586 67.887 2 0.20395311704719332 0.0006279434850863422 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 54057 21235 KYLTEGLLQF True PC9_epitope_Rep1 1210.65977485686 1210.6586699358602 86.504 2 0.20394580909451304 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 52314 12340 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54290993586 52.495 2 0.20392961821065328 0.0006279434850863422 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 95031 11213 RYQTQPVTL True PC9_epitope_Rep1 1104.5927579261997 1104.5916699358602 48.011 2 0.20392341312252626 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 24742 17173 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.4960299358602 71.316 2 0.20392330017684066 0.0006279434850863422 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 88869 2627 REAEHLYHTL True NCI_RA007_Epitope_Rep3 1267.6309343400699 1267.62928490379 14.794 3 0.20391790669494825 0.0006279434850863422 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 63993 20398 LQAPPLTSL True PC9_epitope_Rep5 938.5436824754601 938.54258993586 83.498 2 0.20391141870708857 0.0006279434850863422 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 108081 10867 TDLLLEPYNK True H1975_Epitope_Rep1 1204.6339540318397 1204.6328499358601 46.759 2 0.20390577371383137 0.0006279434850863422 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 99801 6357 SLGSALRPSTS True NCI_RA007_Epitope_Rep5 1074.56693710118 1074.5658499358601 31.128 2 0.20390188032230164 0.0006279434850863422 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 17279 21616 EHDDFFISL True PC9_epitope_Rep5 1121.50293986229 1121.50184993586 88.186 2 0.20389218659466063 0.0006279434850863422 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.E233D|1|0.61|ENSG00000125676|chrX:123686617-123686617|T/G|missense_variant'] 107346 19080 SYRQVAFDF True PC9_epitope_Rep5 1131.5349086969097 1131.53380993586 78.421 2 0.2038898592301957 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 96631 5940 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 27.83 2 0.20388646927209483 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 33217 15604 GLADNTVIAKV True PC9_epitope_Rep1 1099.62372370131 1099.62262993586 64.84 2 0.2038798300273714 0.0006279434850863422 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 137471 22279 YLPELLQTV True PC9_epitope_Rep1 1074.5961119711399 1074.5950099358602 90.51 2 0.20387757745001273 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 43667 21505 IIMLEALERV True PC9_epitope_Rep3 1185.67913040245 1185.6780299358602 88.013 2 0.20387678131898865 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 312 19366 AAIDWFDGK True PC9_epitope_Rep3 1021.4868958753299 1021.48578993586 79.715 2 0.20387198386022576 0.0006279434850863422 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 8749 7067 AVDSQILPK True NCI_RA007_Epitope_Rep5 969.5494961318899 969.54838993586 33.865 2 0.2038709633678568 0.0006279434850863422 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF'] 23975 18442 EYPDRIMNTF True PC9_epitope_Rep2 1284.5808729131597 1284.5797699358602 76.269 2 0.20386754814077415 0.0006279434850863422 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 24156 18847 EYTDVLQKI True PC9_epitope_Rep1 1107.58119018299 1107.58008993586 77.28 2 0.20386140552614881 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 23887 8948 EYMKHTRLF True PC9_epitope_Rep2 1223.6121134717898 1223.61046490379 39.775 3 0.20385941307408342 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 69622 16436 LVTYVPVTTF True NCI_RA007_Epitope_Rep5 1138.62741209942 1138.62630993586 69.976 2 0.2038524466424828 0.0006279434850863422 0.9438714419765777 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 39875 12919 HQIEAVDGEEL True PC9_epitope_Rep5 1238.5778957076998 1238.57678993586 54.704 2 0.20385002927093168 0.0006279434850863422 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 97660 7980 SHDDGNIDL True PC9_epitope_Rep4 984.41485313388 984.41374993586 38.14 2 0.20384136011317142 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 76562 17533 NTDSLDWALY True H1975_Epitope_Rep2 1196.5349682665599 1196.5338699358601 72.743 2 0.20382985387353697 0.0006279434850863422 0.9438714419765777 ['ENSG00000108561|ENST00000225698|C1QBP'] 75359 13377 NQDDSILKV True PC9_epitope_Rep1 1030.5294889632999 1030.52838993586 56.314 2 0.2038273733314243 0.0006279434850863422 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 18829 10617 ELEEDFIK True NCI_RA007_Epitope_Rep1 1021.4967918526899 1021.49568993586 45.286 2 0.20381996372628805 0.0006279434850863422 0.9438714419765777 ['ENSG00000103187|ENST00000262428|COTL1', 'ENST00000567278.1_1_16:84600453-84600705:-|nuORF'] 68881 8407 LVEIAQVPK True H1975_Epitope_Rep1 995.60153170475 995.60042993586 37.266 2 0.2038180489087997 0.0006279434850863422 0.9438714419765777 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 98388 12822 SIIDDRVIL True NCI_RA007_Epitope_Rep3 1042.60225998074 1042.60116993586 57.678 2 0.20381566484966118 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'ENSG00000165475|ENST00000298248|CRYL1'] 7430 9139 ASDDFDQASY True H1975_Epitope_Rep1 1117.4199980839699 1117.41890993586 40.059 2 0.2038146525628383 0.0006279434850863422 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 69966 17778 LYEKDIQLF True PC9_epitope_Rep6 1167.6175756917098 1167.61646993586 81.018 2 0.20381419340748658 0.0006279434850863422 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 103597 13652 SRDKTIIM[Oxidation]W True PC9_epitope_Rep5 1164.59612943492 1164.59502993586 57.535 2 0.20381379750126505 0.0006279434850863422 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 77101 14428 NYAFLHRTL True PC9_epitope_Rep5 1133.59817765981 1133.59654490379 60.496 3 0.2038130753417278 0.0006279434850863422 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 97247 16888 SFMPNSPRF True PC9_epitope_Rep5 1081.5015003936498 1081.50040993586 69.972 2 0.20381068144801784 0.0006279434850863422 0.9438714419765777 ['ENSG00000160326|ENST00000371899|SLC2A6', 'nc|ENSG00000160326|Q9UGQ3-2|SLC2A6', 'ENST00000485978.1_1_9:136338979-136343630:-|nuORF'] 105772 16544 SVIEEHANWSV True PC9_epitope_Rep5 1269.59896550545 1269.5978699358602 68.639 2 0.20381036582519615 0.0006279434850863422 0.9438714419765777 ['ENSG00000121879|ENST00000263967|PIK3CA'] 28393 11725 FSDVDSPYY True H1975_Epitope_Rep2 1091.44475627983 1091.44364993586 50.173 2 0.20380596829074124 0.0006279434850863422 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 43314 9645 IHEPEPHIL True PC9_epitope_Rep4 1083.57129420563 1083.57018993586 44.723 2 0.20380153399729983 0.0006279434850863422 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 114048 15880 TRNDYVMMY True PC9_epitope_Rep3 1191.50526544475 1191.50416993586 66.231 2 0.2038014352752991 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 20685 20886 EQIKDIFYI True PC9_epitope_Rep2 1167.6175756917098 1167.61646993586 85.781 2 0.20379968854377298 0.0006279434850863422 0.9438714419765777 ['ENSG00000164902|ENST00000297540|PHAX'] 70972 6819 MEQELAHAV True H1975_Epitope_Rep2 1026.4804305958999 1026.47932993586 31.148 2 0.2037924837099121 0.0006279434850863422 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 95450 19206 SALPDIKVLTL True PC9_epitope_Rep6 1168.7067250492798 1168.70562993586 86.528 2 0.20378711457193163 0.0006279434850863422 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 23763 16626 EYIRSLNQF True PC9_epitope_Rep1 1168.58767254576 1168.58656993586 68.78 2 0.20378385988314443 0.0006279434850863422 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 40358 6602 HRTELETKL True PC9_epitope_Rep1 1125.61422164677 1125.6131299358601 30.197 2 0.20378316561257248 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 106341 4948 SVSEVVVNR True NCI_RA007_Epitope_Rep3 987.53490869691 987.53380993586 26.458 2 0.20377232264131834 0.0006279434850863422 0.9438714419765777 ['ENST00000578759.1_1_17:60217316-60217976:-|nuORF', 'ENSG00000099821|ENST00000588649|POLRMT'] 131852 17166 VYAVIPAEKF True PC9_epitope_Rep4 1135.62774645259 1135.62664993586 74.036 2 0.20376960930957638 0.0006279434850863422 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 94444 20396 RYFLPPYTF True PC9_epitope_Rep4 1202.6124307416196 1202.61132993586 86.601 2 0.2037609962922762 0.0006279434850863422 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 91140 14297 RLPDIPLRQV True PC9_epitope_Rep4 1205.72444080209 1205.72278490379 62.894 3 0.2037603890638677 0.0006279434850863422 0.9438714419765777 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF'] 74756 21818 NLLQVLEKV True PC9_epitope_Rep1 1054.63864548946 1054.63754993586 88.732 2 0.20375681982906255 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 18704 18554 ELDETKIIL True PC9_epitope_Rep2 1072.6015912743999 1072.6004899358602 76.718 2 0.2037554693317539 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6', 'ENST00000463014.1_1_7:44246980-44247830:+|nuORF'] 81479 23021 PQPDVFPLF True PC9_epitope_Rep2 1058.54368247546 1058.5431749679299 94.043 1 0.2037519501781538 0.0006279434850863422 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 21417 9741 ERNLQSDVL True PC9_epitope_Rep4 1072.55128703704 1072.55018993586 45.106 2 0.20375192817708704 0.0006279434850863422 0.9438714419765777 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 24342 21670 FADPDDFTL True PC9_epitope_Rep5 1039.4498416602698 1039.4487499358602 88.4 2 0.2037478944046877 0.0006279434850863422 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 109673 14899 THEDGVLEL True PC9_epitope_Rep5 1011.48728979815 1011.48618993586 62.312 2 0.20374360895809934 0.0006279434850863422 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 114888 8563 TTEESLRNYY True H1975_Epitope_Rep1 1274.5778957077 1274.57678993586 37.864 2 0.2037341992665291 0.0006279434850863422 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 94722 13844 RYLEQLHQL True PC9_epitope_Rep5 1198.64585612822 1198.64474993586 58.271 2 0.20373412270542735 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 77345 22154 NYLDRFLSL True PC9_epitope_Rep3 1139.59750895347 1139.59640993586 90.5 2 0.20372351268241487 0.0006279434850863422 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 47589 7974 IYNGDM[Oxidation]EKI True PC9_epitope_Rep5 1097.50631137101 1097.5052099358602 35.611 2 0.20371821379659694 0.0006279434850863422 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 20670 9671 EQIEAGTPGRL True PC9_epitope_Rep2 1169.6040508858898 1169.6029499358601 42.537 2 0.20371481171150907 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 108263 16249 TEAPPIIFATP True H1975_Epitope_Rep2 1155.6175756917098 1155.61646993586 67.711 2 0.20371427957370555 0.0006279434850863422 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 135845 11068 YEQLSSEALEA True H1975_Epitope_Rep3 1238.56666231766 1238.5655699358601 47.665 2 0.20371293142894814 0.0006279434850863422 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 6788 11737 AQFEHTILL True NCI_RA007_Epitope_Rep3 1070.5760452329 1070.57494993586 53.279 2 0.20369855597023545 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 106695 20758 SYANYFIRL True PC9_epitope_Rep3 1145.58694426977 1145.58584993586 85.115 2 0.20369169893294722 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 114189 7193 TRTSQMQEL True PC9_epitope_Rep1 1092.52335803704 1092.52226993586 32.481 2 0.20369138927782718 0.0006279434850863422 0.9438714419765777 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 96076 7977 SEDEWTSQA True H1975_Epitope_Rep2 1051.40943340027 1051.4083299358601 35.63 2 0.203690740712377 0.0006279434850863422 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 40468 8293 HSDQQVFEY True H1975_Epitope_Rep3 1151.4883524273098 1151.48724993586 36.884 2 0.20367476433565398 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'SNTB2-CIRH1A|1|fusion'] 28194 17733 FRQEYLDTL True PC9_epitope_Rep5 1183.5873381925896 1183.58624993586 73.229 2 0.20367265487412498 0.0006279434850863422 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 35634 9278 GTLSSWNLK True NCI_RA007_Epitope_Rep3 1004.52909504048 1004.52798993586 43.604 2 0.20366510599626111 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 11598 8068 DGYNYTLSK True NCI_RA007_Epitope_Rep1 1059.48728979815 1059.48618993586 35.381 2 0.2036593611734413 0.0006279434850863422 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 94284 20065 RWSPVRPLVF True PC9_epitope_Rep5 1255.71896149883 1255.71786993586 82.233 2 0.2036543983648286 0.0006279434850863422 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 132810 19286 VYSRTFTWL True PC9_epitope_Rep4 1171.6025943339098 1171.6014899358602 82.289 2 0.20365332193335253 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 39864 20606 HQIDLIVQL True PC9_epitope_Rep5 1077.61824439805 1077.6171499358602 84.31 2 0.2036530527166452 0.0006279434850863422 0.9438714419765777 ['ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 132779 21233 VYSQFITQL True PC9_epitope_Rep3 1097.5757108797297 1097.57460993586 86.964 2 0.2036431541609819 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 23555 21719 EYAHLFEVF True PC9_epitope_Rep1 1153.5444107514497 1153.5433099358602 88.376 2 0.20363631072403518 0.0006279434850863422 0.9438714419765777 ['ENST00000590152.1_1_19:9267931-9272106:+|nuORF', 'nc|ENSG00000130803|Q96PQ6-2|ZNF317', 'ENSG00000130803|ENST00000247956|ZNF317', 'nc|ENSG00000130803|Q96PQ6-3|ZNF317', 'nc|ENSG00000130803|Q96PQ6-4|ZNF317', 'ENST00000591278.5_1_19:9268612-9272106:+|nuORF', 'ZNF317|p.G176C|1|0.09|ENSG00000130803|chr19:9160171-9160171|G/T|missense_variant'] 117173 15151 TYTDRVFFL True NCI_RA007_Epitope_Rep4 1160.5866099165999 1160.58550993586 65.862 2 0.2036248203339136 0.0006279434850863422 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 47513 13594 IYLLIHNNF True NCI_RA007_Epitope_Rep3 1145.62332977849 1145.62222993586 60.768 2 0.20361742568505004 0.0006279434850863422 0.9438714419765777 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 20617 9841 EQEVNILK True PC9_epitope_Rep3 971.5287606873098 971.52766993586 42.815 2 0.20361525451675794 0.0006279434850863422 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 129214 4485 VTDKSMVDKY True H1975_Epitope_Rep3 1184.5747249035599 1184.57362993586 22.369 2 0.20361344656671446 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 2031 6576 AELDEKISA True H1975_Epitope_Rep3 974.49204082542 974.49094993586 30.25 2 0.20361325921099052 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000151332|Q9NS73-5|MBIP', 'ENSG00000151332|ENST00000416007|MBIP'] 6731 19776 AQDFRVLYV True PC9_epitope_Rep1 1109.58694426977 1109.58584993586 80.892 2 0.2036115342021616 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF'] 85820 15871 QMEPAAFQALY True H1975_Epitope_Rep2 1267.59070932087 1267.5896099358602 66.248 2 0.20360547301381965 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'nc|ENSG00000215845|Q8NFU3-2|TSTD1'] 89787 14530 RFEEAHFTF True PC9_epitope_Rep4 1182.5458077337796 1182.54415490379 63.805 3 0.20359444131658117 0.0006279434850863422 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 116872 12366 TYNPAFSRL True PC9_epitope_Rep6 1067.53999407735 1067.5388899358602 58.971 2 0.20359302611365884 0.0006279434850863422 0.9438714419765777 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 138845 4458 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 22.262 2 0.20358623645981036 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 46681 15657 ITVTSEVPFSK True PC9_epitope_Rep3 1206.6496040959798 1206.6485099358601 65.369 2 0.2035831622806515 0.0006279434850863422 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22'] 84415 15642 QGFQLTHSL True PC9_epitope_Rep5 1029.5243440132099 1029.5232499358601 65.179 2 0.20357703899912793 0.0006279434850863422 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 124326 13733 VLDPYLLKY True H1975_Epitope_Rep2 1122.63249747986 1122.6314099358601 57.969 2 0.20357129312029046 0.0006279434850863422 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 110997 7429 TLDENPGVRY True H1975_Epitope_Rep3 1162.56185172074 1162.56074993586 33.554 2 0.20356739651002947 0.0006279434850863422 0.9438714419765777 ['ENSG00000116266|ENST00000370008|STXBP3'] 52657 8585 KQFEKQVEL True PC9_epitope_Rep1 1147.6237237013097 1147.62208490379 37.858 3 0.20356693562268768 0.0006279434850863422 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 27719 20183 FQDPVPLTV True PC9_epitope_Rep4 1014.5385970950199 1014.53750993586 85.771 2 0.20354550403522548 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 20721 15896 EQLAIAEFAR True PC9_epitope_Rep6 1146.6033226098998 1146.6022299358601 73.424 2 0.20353638166282215 0.0006279434850863422 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 17594 15899 EHLQVITTL True PC9_epitope_Rep4 1052.5866099166 1052.58550993586 69.085 2 0.20353232044433694 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 85818 11818 QMDESEQYLY True H1975_Epitope_Rep2 1304.5230832535199 1304.5219899358601 50.534 2 0.20352128018002585 0.0006279434850863422 0.9438714419765777 ['SCYL3-KIFAP3|1|fusion', 'nc|ENSG00000075945|Q92845-4|KIFAP3', 'nc|ENSG00000075945|Q92845-2|KIFAP3', 'nc|ENSG00000075945|Q92845-3|KIFAP3', 'ENSG00000075945|ENST00000361580|KIFAP3'] 4308 17615 AILELDEHL True PC9_epitope_Rep6 1051.55497543515 1051.5538699358601 80.396 2 0.20351834773141295 0.0006279434850863422 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 136813 18164 YITERIIAV True PC9_epitope_Rep3 1076.62299542532 1076.62188993586 75.07 2 0.20350501322939207 0.0006279434850863422 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 117171 14665 TYTDRVFFL True NCI_RA007_Epitope_Rep3 1160.5866099165999 1160.58550993586 65.062 2 0.2035010049840888 0.0006279434850863422 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 30178 20026 FYTVIPHNF True PC9_epitope_Rep1 1136.5654805492 1136.5643899358602 81.857 2 0.20350083933540594 0.0006279434850863422 0.9438714419765777 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 58241 7807 LESYAFNM[Oxidation]K True NCI_RA007_Epitope_Rep1 1117.51139675145 1117.51028993586 34.358 2 0.20349748513572563 0.0006279434850863422 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 21338 20119 ERLGQFMTL True PC9_epitope_Rep1 1093.55901526977 1093.5579099358602 82.218 2 0.20349316800678305 0.0006279434850863422 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 10066 14004 AYVHMVTHF True PC9_epitope_Rep3 1103.52223583823 1103.52112993586 58.946 2 0.20349284996060524 0.0006279434850863422 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 89371 8346 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1339.5714308087101 1339.5703299358602 37.087 2 0.20348044584811298 0.0006279434850863422 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 898 7390 ADMGHLKY True H1975_Epitope_Rep2 933.43783750793 933.43674993586 33.367 2 0.20347989099033864 0.0006279434850863422 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA'] 70973 6907 MEQELAHAV True H1975_Epitope_Rep2 1026.4804305958999 1026.47932993586 31.488 2 0.2034786984721027 0.0006279434850863422 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 41086 12253 HYLPDLHHL True PC9_epitope_Rep2 1143.5825275956702 1143.5808749037901 52.442 3 0.20347795576128178 0.0006279434850863422 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 77543 18422 NYRDTFFNL True PC9_epitope_Rep6 1188.55637241748 1188.55526993586 83.505 2 0.20347715982643017 0.0006279434850863422 0.9438714419765777 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 135573 6750 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 30.916 2 0.20347653759730988 0.0006279434850863422 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 43665 21582 IIMLEALERV True PC9_epitope_Rep1 1185.67913040245 1185.6780299358602 87.838 2 0.2034713325905571 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 104238 9387 SSDPASQLSY True H1975_Epitope_Rep1 1053.46146897313 1053.4608749679298 41.019 1 0.203470327936178 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 43735 20749 IITDLLRSV True PC9_epitope_Rep3 1028.62299542532 1028.62188993586 85.079 2 0.20346935796502183 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000162613|Q96AE4-2|FUBP1', 'ENSG00000162613|ENST00000370768|FUBP1', 'FUBP1|p.Q546Hfs*15|1|0.43|ENSG00000162613|chr1:77956623-77956639|GTGGCTGTGCTTGCTGT/-|frameshift_variant'] 42029 7146 IEDVQKLAA True H1975_Epitope_Rep2 985.5444107514498 985.54330993586 32.422 2 0.2034657914399381 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 11386 9061 DFHVDEQTTVK True PC9_epitope_Rep5 1317.62009487285 1317.61843490379 39.797 3 0.20346555491726231 0.0006279434850863422 0.9438714419765777 ['CON__P34955'] 136800 6964 YISSDGSY True H1975_Epitope_Rep2 890.3657776831401 890.3652249679301 31.707 1 0.20346466211704617 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12', 'nc|ENSG00000164631|P17014-4|ZNF12', 'nc|ENSG00000164631|P17014-5|ZNF12'] 129317 6292 VTDSIRDEY True H1975_Epitope_Rep2 1096.5036681382799 1096.50256993586 29.139 2 0.20346281459705431 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'DNM1L|p.G587Efs*12|1|0.19|ENSG00000087470|chr12:32740116-32740117|GC/-|frameshift_variant', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 123531 22018 VIIDQLPDL True PC9_epitope_Rep5 1024.580461907 1024.57936993586 89.719 2 0.20345747850999227 0.0006279434850863422 0.9438714419765777 ['ENSG00000162337|ENST00000294304|LRP5', 'PPP6R3-LRP5|6|fusion', 'PPP6R3-LRP5|5|fusion', 'ENST00000529993.5_1_11:68154039-68171824:+|nuORF', 'nc|ENSG00000290796|A4QPB2-2|LRP5L', 'nc|ENSG00000290796|A4QPB2|LRP5L', 'ENSG00000070018|ENST00000261349|LRP6', 'LRP6|p.L805Ffs*10|2|0.2|ENSG00000070018|chr12:12159831-12159831|G/-|frameshift_variant', 'PPP6R3-LRP5|3|fusion', 'PPP6R3-LRP5|1|fusion', 'PPP6R3-LRP5|4|fusion', 'PPP6R3-LRP5|2|fusion'] 91625 11948 RPFEDQTSL True PC9_epitope_Rep3 1091.52473793603 1091.52364993586 50.981 2 0.20344654066438983 0.0006279434850863422 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 11695 5944 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 28.254 2 0.20343592369435182 0.0006279434850863422 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 70127 20092 LYKELGEYF True PC9_epitope_Rep5 1160.5753765265597 1160.57426993586 82.333 2 0.2034302951427287 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 95981 12171 SEAEIFYNA True H1975_Epitope_Rep2 1042.46074069714 1042.4596499358602 51.899 2 0.20342580423089196 0.0006279434850863422 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 133025 11147 VYVQNVVKL True NCI_RA007_Epitope_Rep1 1060.6280808057597 1060.6269899358601 47.358 2 0.20341993327911476 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 39824 16412 HQFESSFEL True PC9_epitope_Rep4 1122.4981888350198 1122.49708993586 71.091 2 0.2034160029465445 0.0006279434850863422 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 7465 8476 ASDPFFRHY True H1975_Epitope_Rep2 1138.5195929859399 1138.51795490379 37.554 3 0.20341431911945987 0.0006279434850863422 0.9438714419765777 ['ENST00000477418.2_1_1:27206170-27212721:-|nuORF', 'ENSG00000142751|ENST00000374135|GPN2'] 107044 21852 SYLPISPTF True PC9_epitope_Rep5 1023.52769805815 1023.5266099358599 89.089 2 0.20341225464204873 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 105357 16141 STYEGKPIFL True PC9_epitope_Rep4 1153.60192562757 1153.60082993586 70.026 2 0.2034086430739784 0.0006279434850863422 0.9438714419765777 ['ENSG00000132623|ENST00000378392|ANKEF1'] 17020 13182 EGLPVALDK True PC9_epitope_Rep5 940.5229470308799 940.52184993586 55.709 2 0.20340777702700713 0.0006279434850863422 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000427559.1_1_2:112698001-112698598:-|nuORF'] 117019 15095 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.5233099358602 65.994 2 0.2033941792847635 0.0006279434850863422 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 14656 13809 DVNAAIATIK True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 58.194 2 0.2033851407162325 0.0006279434850863422 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 125600 12286 VMAPRTLLL True H1975_Epitope_Rep3 1012.6103225666399 1012.60922993586 52.436 2 0.20338494504707721 0.0006279434850863422 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'HLA-A|p.A2P|1|0.42|ENSG00000206503|chr6:29942557-29942557|G/C|missense_variant', 'ENST00000463348.5_1_6:30227401-30227711:+|nuORF'] 89319 8229 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64402993586 39.504 2 0.20337556072962654 0.0006279434850863422 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 98266 5154 SIFEPAKGGEK True NCI_RA007_Epitope_Rep4 1161.6029882567298 1161.60188993586 26.348 2 0.20336970509391575 0.0006279434850863422 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 86715 12522 QRISEAYESL True PC9_epitope_Rep2 1194.5880664685797 1194.58696993586 53.473 2 0.20336552140363626 0.0006279434850863422 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 113781 17925 TRDQFLDTL True PC9_epitope_Rep5 1107.5560380643099 1107.5549499358601 73.965 2 0.20335634738646619 0.0006279434850863422 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 7558 18459 ASFNDTFVHV True PC9_epitope_Rep5 1135.5298233164701 1135.52927496793 76.024 1 0.20335403274040745 0.0006279434850863422 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 105090 10987 STLDIVLANK True NCI_RA007_Epitope_Rep4 1072.61282466444 1072.61172993586 49.13 2 0.2033513446522946 0.0006279434850863422 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 21308 13349 ERISLQQEL True PC9_epitope_Rep4 1114.59823722946 1114.5971499358602 59.248 2 0.20335015307819448 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant', 'ENST00000435830.6_1_3:37354991-37360805:+|nuORF'] 132559 13875 VYPLMKEYF True NCI_RA007_Epitope_Rep3 1188.5889184157197 1188.58782993586 61.901 2 0.2033359443578657 0.0006279434850863422 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 41645 9981 IDIIPNPQER True H1975_Epitope_Rep1 1193.64043639461 1193.6393299358601 43.326 2 0.20333318282638085 0.0006279434850863422 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 76042 17966 NRLEEPGNFVL True PC9_epitope_Rep4 1286.6619001151798 1286.66080993586 77.16 2 0.20332532786059537 0.0006279434850863422 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 101814 13632 SPIENIQRVAA True PC9_epitope_Rep3 1196.6513354314802 1196.6502299358601 57.501 2 0.20332214852096528 0.0006279434850863422 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 56854 6799 LEDGSRLVSA True H1975_Epitope_Rep2 1045.54038800017 1045.53928993586 31.069 2 0.20331898230056228 0.0006279434850863422 0.9438714419765777 ['HEATR5A-HECTD1|1|fusion', 'nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A'] 42240 3793 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 19.676 2 0.20331847998045757 0.0006279434850863422 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 76085 8616 NRMLAQQAV True PC9_epitope_Rep3 1029.53894853153 1029.53784993586 38.091 2 0.20331710335911335 0.0006279434850863422 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 73634 18413 NGISDLVKV True PC9_epitope_Rep1 943.53384606775 943.53274993586 75.616 2 0.20331372382255533 0.0006279434850863422 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 24124 7212 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56899490379 32.753 3 0.20330588381504333 0.0006279434850863422 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 62608 19686 LLVKELQSL True PC9_epitope_Rep1 1041.64339651673 1041.6422899358602 80.546 2 0.20330464152712793 0.0006279434850863422 0.9438714419765777 ['ENST00000586271.1_1_17:76120592-76121921:-|nuORF', 'ENST00000589553.5_1_17:76120816-76124832:-|nuORF', 'nc|ENSG00000141524|Q7Z403-2|TMC6', 'ENST00000588087.5_1_17:76116732-76122925:-|nuORF', 'ENSG00000141524|ENST00000590602|TMC6'] 129369 12217 VTEEFQPVY True H1975_Epitope_Rep3 1110.5233409536997 1110.5222499358601 52.165 2 0.20329861709691593 0.0006279434850863422 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 54222 17102 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 72.552 2 0.20329148260248348 0.0006279434850863422 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 130791 14740 VVEQLKDWLY True H1975_Epitope_Rep1 1291.68123857743 1291.68014993586 61.918 2 0.2032750560619354 0.0006279434850863422 0.9438714419765777 ['ENSG00000164109|ENST00000296509|MAD2L1'] 107745 11863 TALVELLK True H1975_Epitope_Rep3 885.5535188831699 885.55242993586 50.78 2 0.20327484319327518 0.0006279434850863422 0.9438714419765777 ['CON__P02769'] 24252 21303 EYYRGFTLF True PC9_epitope_Rep1 1194.5709598524597 1194.5698699358602 86.769 2 0.2032736551827956 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 31424 5775 GEDLANINR True H1975_Epitope_Rep3 1000.49377216092 1000.49266993586 27.239 2 0.20327220566944304 0.0006279434850863422 0.9438714419765777 ['CON__P28800'] 17175 12818 EHAFAVQQL True PC9_epitope_Rep4 1041.5243440132099 1041.5232499358601 57.167 2 0.20326761145155417 0.0006279434850863422 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 11590 10657 DGYDYDGYR True PC9_epitope_Rep2 1122.42541781758 1122.4243299358602 46.304 2 0.2032648623587697 0.0006279434850863422 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 76306 11197 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.4967499358602 48.108 2 0.20325894710786357 0.0006279434850863422 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 70885 11694 MEHPYFYTV True H1975_Epitope_Rep1 1185.5164817514499 1185.5153899358602 49.972 2 0.20325726165334693 0.0006279434850863422 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 127481 7986 VQTEVNREL True PC9_epitope_Rep5 1086.56693710118 1086.5658499358601 35.657 2 0.20325501456639739 0.0006279434850863422 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 4574 6485 ALAAGGYDVEK True NCI_RA007_Epitope_Rep5 1092.54513902744 1092.5440499358601 31.611 2 0.2032380406463298 0.0006647042066280505 0.9438714419765777 ['ENSG00000184357|ENST00000331442|H1-5'] 102714 13531 SQDSKLVYI True PC9_epitope_Rep2 1051.5549754351498 1051.5538699358601 57.338 2 0.20322701584606412 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 42384 5916 IENIQRVAA True NCI_RA007_Epitope_Rep5 1012.5665431783599 1012.56544993586 29.442 2 0.2032257272547171 0.0006647042066280505 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 94869 14522 RYNPNLNTW True PC9_epitope_Rep1 1176.5676058075198 1176.56650993586 60.684 2 0.20321290674680229 0.0006647042066280505 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 14859 13219 DYFEQYGK True PC9_epitope_Rep1 1048.4501760134401 1048.44906993586 55.71 2 0.2032121044736588 0.0006647042066280505 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 54212 16526 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 71.631 2 0.20320773118579327 0.0006647042066280505 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 92145 8464 RQAPIPAEL True NCI_RA007_Epitope_Rep5 993.5607295219298 993.55962993586 39.239 2 0.203205532326548 0.0006647042066280505 0.9438714419765777 ['ENSG00000169583|ENST00000494426|CLIC3'] 126719 8843 VPRQPTVTSV True PC9_epitope_Rep5 1082.60840799034 1082.60730993586 38.958 2 0.20320359305310648 0.0006647042066280505 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5'] 108653 5261 TELDKIRQA True H1975_Epitope_Rep2 1072.58767254576 1072.58656993586 25.304 2 0.20320324772936674 0.0006647042066280505 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 89622 9075 RETETVFVP True H1975_Epitope_Rep3 1076.5502244078798 1076.54912993586 39.892 2 0.2032003554798668 0.0006647042066280505 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 61403 19029 LLEPFVHQV True PC9_epitope_Rep1 1080.59678067748 1080.59568993586 77.985 2 0.20318527356726876 0.0006647042066280505 0.9438714419765777 ['ENSG00000068745|ENST00000328631|IP6K2', 'nc|ENSG00000068745|Q9UHH9-3|IP6K2', 'nc|ENSG00000068745|Q9UHH9-6|IP6K2', 'nc|ENSG00000068745|Q9UHH9-2|IP6K2', 'nc|ENSG00000068745|Q9UHH9-4|IP6K2', 'nc|ENSG00000068745|Q9UHH9-5|IP6K2'] 49437 5295 KIMKDILEKK True NCI_RA007_Epitope_Rep4 1244.7526296958797 1244.7509849037901 26.919 3 0.2031852549221289 0.0006647042066280505 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 119310 10881 VELQELNDR True PC9_epitope_Rep1 1114.5618517207397 1114.56074993586 46.738 2 0.2031851748785989 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 34941 9090 GQWKKGFVL True NCI_RA007_Epitope_Rep4 1061.6022004110898 1061.6011099358602 41.797 2 0.20318031137455966 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 72358 9013 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 39.62 2 0.20317303853729649 0.0006647042066280505 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 92274 9020 RQLEDTVAL True NCI_RA007_Epitope_Rep4 1043.56112344475 1043.56002993586 41.528 2 0.20316796684307686 0.0006647042066280505 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 47661 10299 IYPPKLHQF True PC9_epitope_Rep6 1141.62841515893 1141.62676490379 50.304 3 0.20316587538046307 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 9757 18476 AYLEAIHNF True PC9_epitope_Rep1 1076.52909504048 1076.52857496793 75.86 1 0.20316436076666564 0.0006647042066280505 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 14324 10395 DTDHYFLRY True H1975_Epitope_Rep3 1228.5512870370399 1228.55018993586 45.041 2 0.2031601758304333 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 1147 4574 AEAPSQKVTV True H1975_Epitope_Rep3 1028.55022440788 1028.54912993586 22.715 2 0.20314995315449336 0.0006647042066280505 0.9438714419765777 ['ENSG00000073050|ENST00000262887|XRCC1', 'XRCC1|p.D487Tfs*6|2|0.14|ENSG00000073050|chr19:43546074-43546074|C/-|frameshift_variant', 'ENST00000595789.5_1_19:44056953-44079610:-|nuORF'] 87807 8248 QVIGVVLQK True NCI_RA007_Epitope_Rep3 982.6175161220598 982.61640993586 39.576 2 0.2031427772804798 0.0006647042066280505 0.9438714419765777 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 21164 13718 ERDYTYEEL True PC9_epitope_Rep5 1216.5247975056798 1216.52370993586 57.793 2 0.20314177369331113 0.0006647042066280505 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 51848 7781 KKLLEATEL True NCI_RA007_Epitope_Rep4 1043.62266107215 1043.6215699358602 36.61 2 0.20313128423911597 0.0006647042066280505 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 14924 16933 DYLEVAKHF True PC9_epitope_Rep1 1120.55530978832 1120.5542099358602 69.956 2 0.20312762905665885 0.0006647042066280505 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 109700 11698 THFHELTAL True PC9_epitope_Rep2 1067.53999407735 1067.5388899358602 50.329 2 0.20312696668747218 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 93826 11412 RVDPIGPLSY True H1975_Epitope_Rep3 1115.59750895347 1115.59640993586 49.012 2 0.20312221623541005 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 126699 8375 VPRPPDTVST True PC9_epitope_Rep1 1067.56112344475 1067.56002993586 37.05 2 0.203121243384093 0.0006647042066280505 0.9438714419765777 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 73783 18136 NHDFTPLEI True PC9_epitope_Rep4 1084.5189242796 1084.5178299358602 77.825 2 0.20311960059494533 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 53241 14777 KTETEPVFWYY True H1975_Epitope_Rep3 1461.6816325002499 1461.68052993586 62.218 2 0.20311334914230322 0.0006647042066280505 0.9438714419765777 ['ENST00000564111.5_1_16:12070663-12146080:+|nuORF', 'nc|ENSG00000048471|Q8TEQ0-2|SNX29', 'ENSG00000048471|ENST00000566228|SNX29'] 5763 12910 APEEHPVLL True PC9_epitope_Rep5 1003.5338460677498 1003.53274993586 54.67 2 0.2030996789774346 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 87627 20429 QTVAWFPLYY True H1975_Epitope_Rep3 1286.6335601090198 1286.6324699358602 85.413 2 0.2030954974059261 0.0006647042066280505 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 37938 8680 HEEIAMATVTA True H1975_Epitope_Rep2 1171.55432381215 1171.5532299358601 38.348 2 0.20309333002562233 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 113888 15778 TRHPFLTAL True PC9_epitope_Rep1 1054.59236400338 1054.59126993586 65.509 2 0.20307838388164823 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 133049 10334 VYVVGTAHF True NCI_RA007_Epitope_Rep4 991.5127167003499 991.51160993586 46.607 2 0.20307673479994337 0.0006647042066280505 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 21222 17967 ERFNVPVSL True PC9_epitope_Rep4 1059.5712942056298 1059.57018993586 77.164 2 0.20307647782716456 0.0006647042066280505 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 40470 8522 HSDQQVFEY True H1975_Epitope_Rep3 1151.4883524273098 1151.48724993586 37.766 2 0.20307078861231093 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'SNTB2-CIRH1A|1|fusion'] 41065 15978 HYKPTPLYF True PC9_epitope_Rep3 1164.59678067748 1164.59568993586 66.605 2 0.2030617984023449 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 131793 10898 VYANGIRNI True PC9_epitope_Rep1 1018.5559784946599 1018.55488993586 46.804 2 0.2030601563282324 0.0006647042066280505 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 132307 12704 VYLPLTSHI True NCI_RA007_Epitope_Rep5 1041.58588164061 1041.58478993586 55.53 2 0.20305675901806342 0.0006647042066280505 0.9438714419765777 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 129434 12202 VTEKDLLLY True H1975_Epitope_Rep1 1092.60667665484 1092.60556993586 51.955 2 0.20305403691462395 0.0006647042066280505 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 94660 8312 RYLEKPMEI True NCI_RA007_Epitope_Rep1 1177.6165301458898 1177.6154299358602 36.332 2 0.20305127344834634 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 84412 15729 QGFQLTHSL True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 65.325 2 0.2030492318885198 0.0006647042066280505 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 129318 6385 VTDSIRDEY True H1975_Epitope_Rep2 1096.5036681382799 1096.50256993586 29.485 2 0.20304602047869738 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'DNM1L|p.G587Efs*12|1|0.19|ENSG00000087470|chr12:32740116-32740117|GC/-|frameshift_variant', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 117452 12007 VADTVARVL True PC9_epitope_Rep2 942.5498304850598 942.54872993586 51.503 2 0.20303541011519943 0.0006647042066280505 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 76608 19554 NTFTKLITV True PC9_epitope_Rep1 1035.59644632431 1035.5953499358602 80.039 2 0.20302800265864682 0.0006647042066280505 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB'] 53437 14413 KVIDEIYRV True PC9_epitope_Rep1 1133.64445914589 1133.64280490379 60.262 3 0.20301376748920533 0.0006647042066280505 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 108235 10405 TEAGMFAIRA True H1975_Epitope_Rep1 1065.5277151414898 1065.52660993586 44.972 2 0.20300796971505047 0.0006647042066280505 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000470499.1_1_3:131895323-131895440:+|nuORF', 'ENSG00000161057|ENST00000292644|PSMC2', 'nc|ENSG00000161057|P35998-2|PSMC2'] 48654 8172 KELDYGSMTEA True H1975_Epitope_Rep2 1242.5438186980998 1242.54272993586 36.385 2 0.20300277968353173 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 3487 10052 AGLQFPVGR True H1975_Epitope_Rep2 943.5239500903898 943.52284993586 43.657 2 0.20299769566552195 0.0006647042066280505 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 89170 10289 REIDDYIVQA True H1975_Epitope_Rep1 1220.6037165327198 1220.60260993586 44.521 2 0.20299698189685306 0.0006647042066280505 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 70887 11678 MEHPYFYTV True H1975_Epitope_Rep3 1185.5164817514499 1185.5153899358602 50.057 2 0.2029965954731712 0.0006647042066280505 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 90981 20703 RLIESLFTI True PC9_epitope_Rep4 1090.63864548946 1090.63754993586 87.795 2 0.20299347193942302 0.0006647042066280505 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 64552 17578 LRDGQILEL True PC9_epitope_Rep2 1055.59750895347 1055.59640993586 72.891 2 0.2029863651436048 0.0006647042066280505 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 72106 10021 MRDPQTEEF True PC9_epitope_Rep1 1151.49172355559 1151.4906299358602 43.412 2 0.20298534356867945 0.0006647042066280505 0.9438714419765777 ['ENSG00000102241|ENST00000218364|HTATSF1', 'HTATSF1|p.N703Rfs*5|1|0.52|ENSG00000102241|chrX:136511853-136511854|AT/-|frameshift_variant'] 22377 7085 ETERIVTTY True H1975_Epitope_Rep3 1110.5557037111398 1110.55460993586 32.22 2 0.20296255992415696 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000587329.1_1_19:10909095-10913035:+|nuORF'] 38614 10148 HHIVSIEV True PC9_epitope_Rep2 932.50796567308 932.50686993586 44.371 2 0.20295630463357237 0.0006647042066280505 0.9438714419765777 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 132419 16802 VYNPELDKW True PC9_epitope_Rep1 1162.5658744720197 1162.56476993586 69.453 2 0.2029540685616482 0.0006647042066280505 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 108455 14304 TEELPQLINA True H1975_Epitope_Rep2 1126.5870038394198 1126.5859099358602 60.17 2 0.20294812918690286 0.0006647042066280505 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 75800 9228 NRAQIQTVI True PC9_epitope_Rep6 1041.59309227937 1041.59198993586 45.641 2 0.20294345480340736 0.0006647042066280505 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 27912 19080 FQLRSFDQL True PC9_epitope_Rep4 1152.5927579261997 1152.5916699358602 81.482 2 0.20294200582095565 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 136097 9659 YGEPGEVFINK True NCI_RA007_Epitope_Rep5 1251.6135529404298 1251.61244993586 43.79 2 0.20293865643921408 0.0006647042066280505 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 9694 18813 AYIDYLSHL True PC9_epitope_Rep6 1093.54441075145 1093.5433099358602 85.007 2 0.20293777364536897 0.0006647042066280505 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 43311 11884 IHEPEPHIL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 50.728 2 0.2029304075398987 0.0006647042066280505 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 4269 23201 AIIPYIPTL True PC9_epitope_Rep1 999.60046907559 999.59936993586 94.039 2 0.20292827324726978 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 99998 19375 SLITLIEKV True PC9_epitope_Rep6 1014.6324974798599 1014.63140993586 87.176 2 0.20292208155047542 0.0006647042066280505 0.9438714419765777 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 140147 10946 YVSGELEHV True PC9_epitope_Rep5 1031.4923751785898 1031.4912699358601 47.094 2 0.20291825767370353 0.0006647042066280505 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 52805 12401 KQTDVLQQL True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 55.505 2 0.2029173188081091 0.0006647042066280505 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 76039 18585 NRLEEPGNFVL True PC9_epitope_Rep2 1286.6619001151798 1286.66080993586 76.839 2 0.20291382629721888 0.0006647042066280505 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 35812 9674 GTYDILVTK True NCI_RA007_Epitope_Rep5 1008.54916177872 1008.54806993586 43.847 2 0.202910283007282 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000114302|P13861-2|PRKAR2A', 'ENSG00000114302|ENST00000265563|PRKAR2A'] 129669 14153 VTIEDVQKL True PC9_epitope_Rep6 1043.58627556343 1043.5851699358602 66.309 2 0.20289653759392676 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 21227 17026 ERFNVPVSL True PC9_epitope_Rep6 1059.5712942056298 1059.57018993586 78.043 2 0.20289570793951248 0.0006647042066280505 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 87036 5038 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 24.46 2 0.20289284458193615 0.0006647042066280505 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 76068 13804 NRLTEMETL True PC9_epitope_Rep4 1105.5437591284501 1105.5426699358602 60.993 2 0.2028903383910161 0.0006647042066280505 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 140344 5266 YYEHVKARF True NCI_RA007_Epitope_Rep4 1211.60874234351 1211.60710490379 26.803 3 0.2028883880195932 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 110081 20726 TIAEGLTLAQV True PC9_epitope_Rep2 1114.62338934814 1114.6222899358602 85.16 2 0.20288476008175943 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 138730 7132 YSADREDLY True H1975_Epitope_Rep1 1130.48801807414 1130.4869299358602 32.458 2 0.202883696831204 0.0006647042066280505 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 106260 10550 SVQGIILYR True NCI_RA007_Epitope_Rep2 1047.6076797143498 1047.60658993586 45.634 2 0.20288242853566943 0.0006647042066280505 0.9438714419765777 ['SLC25A4|p.I186L|1|0.58|ENSG00000151729|chr4:185145208-185145208|A/C|missense_variant'] 137309 11881 YLHSQVVSV True PC9_epitope_Rep1 1030.5447451046198 1030.54364993586 50.566 2 0.20287945844342162 0.0006647042066280505 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 28866 9417 FTDQQKLIY True H1975_Epitope_Rep3 1154.5971746002997 1154.5960699358602 41.225 2 0.2028786770412653 0.0006647042066280505 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 113852 13727 TREGGSIPVTL True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 58.09 2 0.2028708808660635 0.0006647042066280505 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 54177 16519 KYPDIISRI True PC9_epitope_Rep3 1103.63389446219 1103.63278993586 68.676 2 0.2028690375296579 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 1439 11098 AEEIAGKWLQA True H1975_Epitope_Rep1 1214.62953735774 1214.62844993586 47.653 2 0.20286236571356323 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 132224 9877 VYKPAQNSW True PC9_epitope_Rep5 1091.5399940773498 1091.5388899358602 42.962 2 0.20285687547492473 0.0006647042066280505 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 86259 17021 QQADVRLML True PC9_epitope_Rep5 1072.56991430664 1072.5688099358601 70.489 2 0.2028495159184694 0.0006647042066280505 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI', 'ENST00000564350.1_1_15:89826403-89833569:+|nuORF'] 67352 6590 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 30.26 2 0.20284881785494652 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 140861 17708 YYTKGFALL True PC9_epitope_Rep6 1074.5749826037397 1074.57388993586 80.747 2 0.2028399454545956 0.0006647042066280505 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 31658 9856 GEHTLLVTV True NCI_RA007_Epitope_Rep3 967.5338460677499 967.53274993586 45.841 2 0.202839439945701 0.0006647042066280505 0.9438714419765777 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 56663 6689 LEAAIADAEQR True H1975_Epitope_Rep1 1185.59896550545 1185.5978699358602 30.778 2 0.20283785284206063 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 84877 8848 QHQSGIVQL True PC9_epitope_Rep6 1008.5352430500798 1008.53414993586 43.966 2 0.2028223580582015 0.0006647042066280505 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 53191 11284 KTAAEDAIRNL True PC9_epitope_Rep1 1200.6462500510397 1200.64459490379 48.283 3 0.20282030344480412 0.0006647042066280505 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000173933|Q9BWF3-3|RBM4', 'nc|ENSG00000173933|Q9BWF3-4|RBM4', 'nc|ENSG00000173933|Q9BWF3-2|RBM4', 'ENSG00000173914|ENST00000310046|RBM4B'] 113687 9027 TRDETNYGI True PC9_epitope_Rep1 1067.4883524273098 1067.48724993586 39.572 2 0.20281751802613554 0.0006647042066280505 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 132008 20494 VYGPLPQSF True PC9_epitope_Rep5 1006.5123823471798 1006.51128993586 83.869 2 0.2028156603535677 0.0006647042066280505 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 110728 10746 TKEVNSGFFY True H1975_Epitope_Rep2 1190.5607890915799 1190.5596899358602 46.361 2 0.20281199111515508 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 7978 3943 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 20.227 2 0.20280514754407278 0.0006647042066280505 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 85347 9664 QLDHVNVYY True H1975_Epitope_Rep3 1149.54547338061 1149.54436993586 42.191 2 0.20280398403369834 0.0006647042066280505 0.9438714419765777 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 14807 16949 DYAYLREHF True PC9_epitope_Rep1 1212.5563724174797 1212.55471490379 70.018 3 0.2028001221441926 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 22268 3527 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 18.517 2 0.20278652321331422 0.0006647042066280505 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 140447 19079 YYFPVKNVI True PC9_epitope_Rep4 1141.6171817688898 1141.6160899358601 81.478 2 0.20278271966410974 0.0006647042066280505 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 106742 22486 SYDPLRIYLF True PC9_epitope_Rep5 1285.6706738937298 1285.6695699358602 91.494 2 0.20278167341720466 0.0006647042066280505 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000480929.1_1_2:219612227-219612548:+|nuORF'] 69068 12403 LVILEGELER True NCI_RA007_Epitope_Rep2 1169.6655885132898 1169.66448993586 52.853 2 0.20277161606794175 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 128477 9723 VSEYISSDGSY True H1975_Epitope_Rep2 1205.5088130883698 1205.50770993586 42.385 2 0.20277076974200847 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12'] 88363 19727 QYMKIISSF True PC9_epitope_Rep5 1115.5685173243098 1115.56740993586 80.926 2 0.20276335688413033 0.0006647042066280505 0.9438714419765777 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 107316 11817 SYREDPIVY True PC9_epitope_Rep4 1140.5451390274397 1140.5440499358601 53.221 2 0.20274894056673243 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 99818 7241 SLGTADVHFER True NCI_RA007_Epitope_Rep5 1230.59929985862 1230.59764490379 34.529 3 0.2027483757538741 0.0006647042066280505 0.9438714419765777 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 52450 12529 KPHAPIISI True PC9_epitope_Rep5 974.5913013742199 974.59020993586 53.192 2 0.20274732915334487 0.0006647042066280505 0.9438714419765777 ['ENSG00000137962|ENST00000260526|ARHGAP29'] 761 11868 AAVTSLFAK True PC9_epitope_Rep6 906.5174677276199 906.51636993586 56.867 2 0.20273817471859146 0.0006647042066280505 0.9438714419765777 ['CON__Q3SX09'] 17771 21057 EHVFWVVSL True PC9_epitope_Rep4 1114.5811306133398 1114.58002993586 89.156 2 0.20273544444338984 0.0006647042066280505 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 28953 8979 FTEQYNEQY True H1975_Epitope_Rep3 1220.4985827578398 1220.49807496793 39.533 1 0.2027304020397933 0.0006647042066280505 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 4193 13761 AIDLFTDAIK True H1975_Epitope_Rep3 1105.60192562757 1105.60082993586 58.232 2 0.20272781408884563 0.0006647042066280505 0.9438714419765777 ['ENSG00000100380|ENST00000216218|ST13', 'nc|ENSG00000232150|Q8IZP2|ST13P4', 'ENST00000456632.1_1_X:92543289-92543514:-|nuORF', 'nc|ENSG00000212789|Q8NFI4|ST13P5'] 40735 12902 HTVEDLVKV True PC9_epitope_Rep5 1038.5709598524597 1038.5698699358602 54.64 2 0.20272769772565138 0.0006647042066280505 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 24163 18638 EYTDVLQKI True PC9_epitope_Rep5 1107.58119018299 1107.58008993586 76.716 2 0.20272753800682705 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 43890 17586 ILDIPNQLYY True H1975_Epitope_Rep2 1250.6546894764201 1250.65358993586 72.957 2 0.20271399721943711 0.0006647042066280505 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF', 'ENST00000482545.5_1_1:113239451-113241292:+|nuORF', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 44033 18591 ILLAELEQLK True PC9_epitope_Rep6 1168.7067250492798 1168.70562993586 84.152 2 0.20270889861347452 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 14991 18654 DYTIGFGKF True PC9_epitope_Rep6 1046.50729696674 1046.5061899358602 84.396 2 0.2027064625457831 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 94981 12793 RYQDAIRVF True PC9_epitope_Rep4 1166.6196413803798 1166.61799490379 57.071 3 0.20270319372906354 0.0006647042066280505 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 21812 7638 ESDPAYQQY True H1975_Epitope_Rep3 1099.44581890899 1099.44527496793 34.363 1 0.20270011301529095 0.0006647042066280505 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 9846 19513 AYLPEWKENI True PC9_epitope_Rep5 1261.6342883850098 1261.6331899358602 80.11 2 0.20269855748101215 0.0006647042066280505 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 107107 20282 SYMGHFDLL True PC9_epitope_Rep2 1081.49026700361 1081.4891699358602 83.436 2 0.20269734906467696 0.0006647042066280505 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 2278 18588 AEPLEIILHLP True H1975_Epitope_Rep3 1243.71762408615 1243.71652993586 77.956 2 0.2026946540146958 0.0006647042066280505 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 62648 21949 LLVSLLEHL True PC9_epitope_Rep2 1035.63283183303 1035.6317299358602 89.902 2 0.20269323099963008 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1', 'ENST00000461493.1_1_7:6089476-6098783:-|nuORF'] 71338 16654 MHNEEPFAL True PC9_epitope_Rep1 1086.4804305958999 1086.47932993586 68.889 2 0.20268999921495337 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 85491 20873 QLIDKVWQL True PC9_epitope_Rep3 1141.64954452633 1141.64844993586 85.56 2 0.20268406566241845 0.0006647042066280505 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF'] 23565 12790 EYAVSVLLR True NCI_RA007_Epitope_Rep1 1048.59169529704 1048.5905899358602 53.737 2 0.2026835145941829 0.0006647042066280505 0.9438714419765777 ['CON__P02769'] 88234 20807 QYEEQFVTL True PC9_epitope_Rep1 1155.5448046742697 1155.54370993586 84.861 2 0.2026810447376347 0.0006647042066280505 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 96117 9586 SEDSRFITV True H1975_Epitope_Rep2 1052.51383889916 1052.51274993586 41.847 2 0.20267868867332955 0.0006647042066280505 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG'] 139464 9024 YTFPNGAKY True H1975_Epitope_Rep3 1059.5025459394699 1059.5014499358601 39.705 2 0.2026690784070686 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000188010|Q502X0|MORN2', 'ENSG00000188010|ENST00000644631|MORN2'] 104219 9446 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 41.301 2 0.2026637332236712 0.0006647042066280505 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 140582 17626 YYLTDVDRI True PC9_epitope_Rep4 1156.5764391557198 1156.57534993586 75.819 2 0.2026496761981468 0.0006647042066280505 0.9438714419765777 ['ENSG00000088256|ENST00000078429|GNA11'] 25497 4726 FEQAGEPRQP True H1975_Epitope_Rep2 1157.5465360097699 1157.54542993586 23.272 2 0.20264260054172858 0.0006647042066280505 0.9438714419765777 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 4080 10691 AHSIQIMKV True PC9_epitope_Rep5 1025.56918603065 1025.5680899358601 46.114 2 0.2026425035244868 0.0006647042066280505 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A'] 53486 19271 KVLDILQHI True PC9_epitope_Rep2 1077.65462990677 1077.6535299358602 79.499 2 0.2026358124923735 0.0006647042066280505 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 85822 18246 QMISRIEYI True PC9_epitope_Rep1 1151.60088008175 1151.5997899358601 74.974 2 0.20263524373837039 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E'] 74739 21509 NLLKLIAEV True PC9_epitope_Rep2 1011.6328318330299 1011.63172993586 88.202 2 0.20263233878041745 0.0006647042066280505 0.9438714419765777 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 74565 4937 NLDDNAQRY True H1975_Epitope_Rep2 1107.49450043691 1107.4934099358602 24.073 2 0.20262795727678004 0.0006647042066280505 0.9438714419765777 ['ENSG00000198113|ENST00000357503|TOR4A'] 42551 14910 IESLIAVFQK True NCI_RA007_Epitope_Rep2 1146.6648602373 1146.66376993586 62.673 2 0.20262673987496313 0.0006647042066280505 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 76103 18495 NRPEFITEF True PC9_epitope_Rep2 1151.56112344475 1151.56002993586 76.476 2 0.20262585734254315 0.0006647042066280505 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 76059 13185 NRLLEATSY True PC9_epitope_Rep5 1065.54547338061 1065.54436993586 55.721 2 0.20262366383290334 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 140666 14207 YYPSTPGRYSI True PC9_epitope_Rep2 1302.6244519773 1302.62334993586 59.915 2 0.20262296876908617 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 42110 12936 IEEMPLNVA True H1975_Epitope_Rep2 1014.5055827145799 1014.50448993586 54.872 2 0.20262170673458235 0.0006647042066280505 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000581621.1_1_17:7481648-7481801:+|nuORF'] 9104 20212 AVLERLVDI True PC9_epitope_Rep3 1026.6073453611798 1026.6062499358602 83.004 2 0.20261955506780052 0.0006647042066280505 0.9438714419765777 ['ENSG00000160714|ENST00000292211|UBE2Q1', 'ENST00000497453.1_1_1:154524878-154531400:-|nuORF'] 11586 7092 DGVVEITGK True NCI_RA007_Epitope_Rep2 916.48656152216 916.48546993586 32.209 2 0.20260920208717684 0.0006647042066280505 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 25246 11740 FEDENFILK True H1975_Epitope_Rep1 1153.5655401188499 1153.56444993586 50.15 2 0.2026085114643879 0.0006647042066280505 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 39086 13589 HLAIKLEQV True PC9_epitope_Rep1 1049.62332977849 1049.62222993586 57.125 2 0.20259799430971712 0.0006647042066280505 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 94874 14444 RYNPNLNTW True PC9_epitope_Rep5 1176.5676058075198 1176.56650993586 60.56 2 0.20259500821322798 0.0006647042066280505 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 21865 4459 ESEELTAER True NCI_RA007_Epitope_Rep2 1062.4829326937 1062.48182993586 21.978 2 0.20259254943405638 0.0006647042066280505 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 22376 7144 ETERIVTTY True H1975_Epitope_Rep2 1110.5557037111398 1110.55460993586 32.414 2 0.20258510557030304 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000587329.1_1_19:10909095-10913035:+|nuORF'] 89716 11274 REYQDLLNV True NCI_RA007_Epitope_Rep3 1148.5825871653199 1148.5814899358602 51.459 2 0.20256311893605455 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 96177 13435 SEEFPSFGA True H1975_Epitope_Rep3 969.4079768482899 969.40686993586 56.948 2 0.2025525725575018 0.0006647042066280505 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 11693 7320 DHFASVHSV True PC9_epitope_Rep1 997.46174375665 997.46064993586 32.969 2 0.20254564560130128 0.0006647042066280505 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 87746 20530 QVFPGLLERV True PC9_epitope_Rep1 1156.6604435631998 1156.65934993586 83.781 2 0.2025453909738447 0.0006647042066280505 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 17344 10495 EHDPVGQMV True PC9_epitope_Rep3 1010.44913046762 1010.44802993586 45.308 2 0.2025419664420418 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 57233 5810 LEFEHQRAP True NCI_RA007_Epitope_Rep4 1125.55670677065 1125.5550749037902 28.972 3 0.20253503490158145 0.0006647042066280505 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 83725 6682 QEARPPLVSA True H1975_Epitope_Rep3 1066.5771078620598 1066.5760099358602 30.657 2 0.20253156880202672 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 42049 10244 IEEDIRDLAA True H1975_Epitope_Rep2 1143.57716743171 1143.57606993586 44.409 2 0.20252835657030677 0.0006647042066280505 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 28858 9548 FTDPRTMGY True H1975_Epitope_Rep3 1086.4804305958999 1086.47932993586 41.735 2 0.2025258240657508 0.0006647042066280505 0.9438714419765777 ['ENSG00000140650|ENST00000268261|PMM2', 'ENST00000567697.1_1_16:8904837-8941679:+|nuORF'] 23575 19710 EYDLIVHQL True PC9_epitope_Rep3 1128.58152453616 1128.5804299358601 81.044 2 0.20251491767145338 0.0006647042066280505 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 140371 10751 YYEKQFPEI True NCI_RA007_Epitope_Rep3 1215.5811901829898 1215.58008993586 49.335 2 0.20251334141145594 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'nc|ENSG00000141027|O75376-3|NCOR1'] 4369 18961 AIQDKLFQV True PC9_epitope_Rep5 1060.59169529704 1060.5905899358602 77.958 2 0.20251303066872933 0.0006647042066280505 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 110183 15880 TIDPSNPMV True PC9_epitope_Rep1 972.45863252216 972.4580849679301 65.891 1 0.20250843419435197 0.0006647042066280505 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 135572 6650 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 30.532 2 0.2025069213968 0.0006647042066280505 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 32500 9154 GGNFGFGDSR True PC9_epitope_Rep4 1012.4362572847999 1012.43516993586 42.804 2 0.2025061603686952 0.0006647042066280505 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 134955 16620 YAFPKAVSV True PC9_epitope_Rep1 980.5331177917599 980.53202993586 68.755 2 0.20250584021900214 0.0006647042066280505 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 107328 21559 SYRELFEFF True PC9_epitope_Rep4 1236.5815245361598 1236.5804299358601 91.107 2 0.202504119108005 0.0006647042066280505 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 47530 19460 IYLPYLHEW True PC9_epitope_Rep6 1232.62299542532 1232.62188993586 87.515 2 0.20250353846880717 0.0006647042066280505 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 6893 14909 AQIKPFYTV True PC9_epitope_Rep4 1065.5858816406098 1065.58478993586 65.29 2 0.20250195502718696 0.0006647042066280505 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 23988 16683 EYPDRIMNTF True PC9_epitope_Rep6 1284.5808729131597 1284.5797699358602 76.641 2 0.20250183741658306 0.0006647042066280505 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 54131 11588 KYNANFVTF True NCI_RA007_Epitope_Rep5 1102.54474510462 1102.54364993586 51.22 2 0.2025015058337898 0.0006647042066280505 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 136199 20214 YGLPVVVKL True PC9_epitope_Rep2 986.6164534929 986.61534993586 83.17 2 0.20250096862794248 0.0006647042066280505 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 6983 5840 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep3 935.4348606187698 935.43431496793 29.952 1 0.20249999033561988 0.0006647042066280505 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 85039 18241 QIIRELQVL True PC9_epitope_Rep4 1110.67609362734 1110.6749899358601 78.233 2 0.2024995222860996 0.0006647042066280505 0.9438714419765777 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1', 'MAP2K1|p.R108Q|1|0.29|ENSG00000169032|chr15:66436777-66436777|G/A|missense_variant', 'ENST00000519737.1_1_8:29885475-29885718:+|nuORF', 'ENST00000599345.1_1_19:4101110-4123872:-|nuORF', 'nc|ENSG00000169032|Q02750-2|MAP2K1', 'ENSG00000126934|ENST00000262948|MAP2K2'] 8060 8592 ATEDPWKTNY True H1975_Epitope_Rep1 1223.54586730343 1223.5447699358601 37.977 2 0.20247971034045045 0.0006647042066280505 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 9699 16239 AYIERMNYI True PC9_epitope_Rep2 1171.5695799534699 1171.56848993586 67.708 2 0.20247945584963195 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENST00000471959.2_1_6:111995672-112015899:-|nuORF', 'ENSG00000176105|ENST00000314574|YES1'] 90338 21121 RIIDSLFNTV True PC9_epitope_Rep1 1176.6502728023202 1176.64916993586 86.072 2 0.20247244675760662 0.0006647042066280505 0.9438714419765777 ['ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-3|UGDH', 'nc|ENSG00000109814|O60701-2|UGDH'] 115696 15092 TVLEEIGNRV True PC9_epitope_Rep6 1128.6138872935999 1128.61278993586 70.11 2 0.20246921926945496 0.0006647042066280505 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 52052 21149 KLILLITQV True PC9_epitope_Rep1 1039.7005174700298 1039.69942993586 86.182 2 0.20246304677753904 0.0006647042066280505 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 137177 12410 YLDSIPPGQY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 52.821 2 0.20246107944690192 0.0006647042066280505 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 53500 16230 KVLNELTQL True PC9_epitope_Rep2 1056.6179100448799 1056.6168099358601 67.674 2 0.20245726695919922 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 94078 16407 RVVDYLTKL True PC9_epitope_Rep2 1105.64954452633 1105.64844993586 68.353 2 0.20245406945675154 0.0006647042066280505 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 133018 16264 VYVQHPITF True PC9_epitope_Rep3 1102.5811306133398 1102.58002993586 67.697 2 0.2024521560713716 0.0006647042066280505 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 140680 7252 YYPTEDVPR True H1975_Epitope_Rep1 1138.5294889632999 1138.52838993586 32.904 2 0.2024310577224904 0.0006647042066280505 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 94536 22355 RYILEPFFI True PC9_epitope_Rep2 1196.65938093404 1196.65828993586 91.478 2 0.20242951533485956 0.0006647042066280505 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 72293 4399 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 22.03 2 0.20241906353365383 0.0006647042066280505 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 139706 11966 YTVEDTHYV True PC9_epitope_Rep1 1125.49785448185 1125.4967499358602 50.892 2 0.20241515301039248 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 24646 9776 FASHVSPEV True PC9_epitope_Rep3 971.47124581119 971.47014993586 42.557 2 0.20241316825237407 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 102762 3963 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 21.463 2 0.20240188862092537 0.0006647042066280505 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 44681 20890 IPMELVNEV True PC9_epitope_Rep3 1042.53688284286 1042.53578993586 85.628 2 0.2024001683602165 0.0006647042066280505 0.9438714419765777 ['ENSG00000108773|ENST00000225916|KAT2A', 'nc|ENSG00000108773|Q92830-2|KAT2A'] 87942 4617 QVQAAQFAK True NCI_RA007_Epitope_Rep3 989.5294293936498 989.52832993586 25.075 2 0.2023981270164256 0.0006647042066280505 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1'] 94708 8725 RYLEQLHQL True NCI_RA007_Epitope_Rep4 1198.64585612822 1198.64422490379 40.352 3 0.2023969283543951 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 54408 7583 KYSLIKGNF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 36.959 2 0.2023958721314556 0.0006647042066280505 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 25631 9768 FEVTGQETVA True H1975_Epitope_Rep1 1079.51350454599 1079.51297496793 42.504 1 0.20239215849647335 0.0006647042066280505 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 88796 8972 RDQIVTVSV True H1975_Epitope_Rep3 1015.56620882519 1015.56510993586 39.506 2 0.20238705439298363 0.0006647042066280505 0.9438714419765777 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 132070 17709 VYIKDLSSF True PC9_epitope_Rep4 1070.56481184286 1070.56370993586 76.142 2 0.20238399796973425 0.0006647042066280505 0.9438714419765777 ['ENSG00000084731|ENST00000264712|KIF3C'] 47770 10908 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65934993586 47.279 2 0.2023822247933281 0.0006647042066280505 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 104077 10467 SRVAVVNQI True PC9_epitope_Rep1 984.5716285588001 984.57052993586 45.151 2 0.20237954292237031 0.0006647042066280505 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'SPTBN1|p.A912V|1|0.12|ENSG00000115306|chr2:54629957-54629957|C/T|missense_variant', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 77541 20265 NYRDTFFNL True PC9_epitope_Rep2 1188.55637241748 1188.55526993586 83.369 2 0.20237362142130533 0.0006647042066280505 0.9438714419765777 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 98925 7840 SIYGEKFEDEN True H1975_Epitope_Rep1 1329.57247597409 1329.57136993586 35.107 2 0.20236731666388216 0.0006647042066280505 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID'] 22985 17839 EVIKELAQI True PC9_epitope_Rep5 1041.6070110080097 1041.60647496793 73.635 1 0.20236197010456344 0.0006647042066280505 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 75511 20213 NQITQLESL True PC9_epitope_Rep5 1044.54513902744 1044.54457496793 82.795 1 0.2023604625794128 0.0006647042066280505 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 94416 9875 RYFENPQVI True NCI_RA007_Epitope_Rep3 1164.5927579262 1164.5916699358602 45.919 2 0.20236020354524764 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 106280 9124 SVQRSFTQV True PC9_epitope_Rep5 1050.54580773378 1050.54470993586 40.042 2 0.20235768719856312 0.0006647042066280505 0.9438714419765777 ['ENSG00000198911|ENST00000361204|SREBF2', 'nc|ENSG00000198911|Q12772-2|SREBF2'] 27774 8367 FQEENTEKL True PC9_epitope_Rep5 1136.5349682665599 1136.5338699358601 37.127 2 0.2023570904560974 0.0006647042066280505 0.9438714419765777 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 14347 6356 DTDSQRLAY True H1975_Epitope_Rep2 1067.4883524273098 1067.48724993586 29.376 2 0.20235368254308603 0.0006647042066280505 0.9438714419765777 ['ENSG00000101412|ENST00000343380|E2F1'] 140886 19306 YYTTPIYRF True PC9_epitope_Rep5 1222.60225998074 1222.60116993586 79.306 2 0.20235001903282843 0.0006647042066280505 0.9438714419765777 ['ENSG00000104957|ENST00000221554|YJU2B'] 77173 22561 NYGDYFNVF True PC9_epitope_Rep2 1137.47672511445 1137.47562993586 92.273 2 0.20234901074002123 0.0006647042066280505 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 11361 17112 DFEQPLAISR True PC9_epitope_Rep1 1174.59823722946 1174.5971499358602 70.647 2 0.2023463380292016 0.0006647042066280505 0.9438714419765777 ['ENST00000477757.5_1_10:97028616-97050708:-|nuORF', 'PDLIM1|p.V196Ffs*11|1|0.25|ENSG00000107438|chr10:95247314-95247314|C/-|frameshift_variant', 'ENSG00000107438|ENST00000329399|PDLIM1'] 22902 9873 EVFEDAAEIR True NCI_RA007_Epitope_Rep2 1177.5615173675699 1177.5604299358602 43.03 2 0.2023344632682881 0.0006647042066280505 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 119106 15958 VEIFPIFKA True H1975_Epitope_Rep2 1062.6113681124598 1062.61026993586 66.58 2 0.20233317860666572 0.0006647042066280505 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 22141 8846 ESYSVYVYK True H1975_Epitope_Rep3 1136.5389910178399 1136.5378899358602 39.032 2 0.20231894623651595 0.0006647042066280505 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 97864 19260 SHLDYDITL True PC9_epitope_Rep1 1075.5185899264302 1075.51748993586 78.886 2 0.20230832693178255 0.0006647042066280505 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 38759 14908 HHYEGAVVIL True PC9_epitope_Rep1 1136.5978433066398 1136.59674993586 62.166 2 0.2023080686557788 0.0006647042066280505 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 138249 11705 YQTQLIQRV True PC9_epitope_Rep4 1147.6349570913499 1147.63386993586 52.785 2 0.20230739431253425 0.0006647042066280505 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 131932 17416 VYEYVVERF True PC9_epitope_Rep4 1202.5971746002995 1202.5960699358602 74.984 2 0.20230070219361695 0.0006647042066280505 0.9438714419765777 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 24142 14911 EYSRFVNQI True PC9_epitope_Rep1 1154.5720224816198 1154.57092993586 62.177 2 0.2022988621798827 0.0006647042066280505 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'ENST00000483237.1_1_1:155891178-155891799:-|nuORF', 'ENST00000478002.5_1_1:155885750-155895538:-|nuORF', 'nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 77455 20004 NYNQHAMVFF True PC9_epitope_Rep3 1269.5600778989299 1269.5589899358602 82.192 2 0.20229845815650024 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130912815-130915395:+|nuORF', 'ENST00000488391.5_1_9:130913785-130915395:+|nuORF'] 41526 6906 IDASQTEFEK True NCI_RA007_Epitope_Rep1 1166.54553295026 1166.54442993586 30.865 2 0.20229071304234714 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-7|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 72245 19621 MRYVASYLL True PC9_epitope_Rep2 1114.5845017416198 1114.5834099358601 80.857 2 0.20228299525174726 0.0006647042066280505 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 64053 14002 LQDPNHLTL True PC9_epitope_Rep5 1049.55055876105 1049.54946993586 58.878 2 0.20227942601979876 0.0006647042066280505 0.9438714419765777 ['KCTD21|p.H177R|1|0.41|ENSG00000188997|chr11:78174025-78174025|T/C|missense_variant', 'ENSG00000188997|ENST00000340067|KCTD21'] 115811 9209 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep4 1134.59546072858 1134.5943699358602 43.021 2 0.20227691084028532 0.0006647042066280505 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 70328 22164 LYPLTNYTF True PC9_epitope_Rep1 1130.56481184286 1130.56370993586 90.071 2 0.2022754857432597 0.0006647042066280505 0.9438714419765777 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 14193 6023 DSTANEVEAVK True NCI_RA007_Epitope_Rep1 1161.5513466066898 1161.5502499358602 27.47 2 0.20227308168565417 0.0006647042066280505 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 108599 16457 TEIIILATR True PC9_epitope_Rep2 1028.62299542532 1028.62188993586 68.542 2 0.20226306833455157 0.0006647042066280505 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 76648 11921 NTIESLKDV True PC9_epitope_Rep2 1017.5342399905699 1017.53314993586 51.177 2 0.20225307561006467 0.0006647042066280505 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 95075 13528 RYSPVLSRF True PC9_epitope_Rep5 1123.61382772395 1123.61218490379 57.057 3 0.2022449399287128 0.0006647042066280505 0.9438714419765777 ['ENSG00000166685|ENST00000299886|COG1'] 25146 8351 FDQLLAEEK True H1975_Epitope_Rep1 1091.5498900547097 1091.5487899358602 37.052 2 0.20224342936517112 0.0006647042066280505 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 76124 14523 NRPNLYYEV True PC9_epitope_Rep5 1166.57202248162 1166.57092993586 60.861 2 0.2022415145549467 0.0006647042066280505 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 127048 18560 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 76.178 2 0.20223513100610732 0.0006647042066280505 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 15962 7419 EDVFVHQTAIK True NCI_RA007_Epitope_Rep1 1285.6666511424498 1285.66501490379 32.854 3 0.20223237557665316 0.0006647042066280505 0.9438714419765777 ['ENSG00000065978|ENST00000321358|YBX1', 'ENSG00000006047|ENST00000007699|YBX2', 'nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3', 'nc|ENSG00000060138|P16989-2|YBX3'] 54268 16145 KYPLNLYLL True NCI_RA007_Epitope_Rep4 1135.66413196131 1135.66302993586 70.014 2 0.20221958934886058 0.0006647042066280505 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 16916 2681 EGDKHTLSKK True NCI_RA007_Epitope_Rep2 1141.6091362663299 1141.60750490379 14.651 3 0.20221456880202646 0.0006647042066280505 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6', 'ENST00000462951.2_1_1:153507620-153508442:-|nuORF'] 13875 13441 DRDGTIIHL True PC9_epitope_Rep1 1038.54580773378 1038.54470993586 56.56 2 0.2022145672389451 0.0006647042066280505 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF', 'ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7061038-7061341:+|nuORF'] 24210 15364 EYVEKFYRI True PC9_epitope_Rep5 1245.6393737654498 1245.63772490379 64.107 3 0.2022074547331482 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 54171 10261 KYPDAVATW True NCI_RA007_Epitope_Rep5 1049.51819600361 1049.5170899358602 46.099 2 0.20220575624652679 0.0006647042066280505 0.9438714419765777 ['CON__P31096', 'ENST00000505146.1_1_4:88898047-88901296:+|nuORF', 'ENST00000508002.5_1_4:88896921-88901631:+|nuORF', 'nc|ENSG00000118785|P10451-4|SPP1', 'nc|ENSG00000118785|P10451-5|SPP1', 'ENSG00000118785|ENST00000395080|SPP1', 'ENST00000509659.5_1_4:88898870-88904045:+|nuORF'] 43620 16996 IIIPEIQKV True PC9_epitope_Rep6 1051.66413196131 1051.66302993586 77.926 2 0.20220402371996962 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 47197 17207 IYAPKLQEF True PC9_epitope_Rep2 1107.59644632431 1107.5953499358602 71.444 2 0.20219665562951897 0.0006647042066280505 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 31877 5223 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.4390649679301 25.158 1 0.20219566159819785 0.0006647042066280505 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 41862 16653 IDTIEIITDR True PC9_epitope_Rep6 1187.63976768827 1187.6386699358602 76.526 2 0.20218730648425176 0.0006647042066280505 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 38510 6202 HHDDPEVL True PC9_epitope_Rep5 960.4301092752 960.42900993586 28.839 2 0.2021863460218751 0.0006647042066280505 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 4764 4869 ALEENNNFSK True NCI_RA007_Epitope_Rep2 1164.54111627616 1164.54000993586 23.562 2 0.20218118225978993 0.0006647042066280505 0.9438714419765777 ['ENSG00000104435|ENST00000220876|STMN2', 'nc|ENSG00000104435|Q93045-2|STMN2'] 131899 16771 VYEGPELNHAF True PC9_epitope_Rep1 1274.59315184902 1274.5920499358601 69.333 2 0.2021658333305843 0.0006647042066280505 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant'] 90485 4338 RKAALEQDL True NCI_RA007_Epitope_Rep3 1042.5771078620598 1042.5760099358602 23.811 2 0.20216422947625293 0.0006647042066280505 0.9438714419765777 ['ENSG00000100292|ENST00000216117|HMOX1'] 47644 12739 IYPPKLHQF True PC9_epitope_Rep1 1141.62841515893 1141.62676490379 53.876 3 0.20215369272872213 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 89228 10666 REISNLLVAT True NCI_RA007_Epitope_Rep4 1114.6346227381798 1114.63352993586 47.874 2 0.20215289604234665 0.0006647042066280505 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 8078 13682 ATEFIMNEY True H1975_Epitope_Rep1 1116.47976188956 1116.4786699358601 57.763 2 0.2021473170070904 0.0006647042066280505 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 124281 10689 VLDELTLAR True H1975_Epitope_Rep1 1028.5866099165999 1028.58550993586 46.074 2 0.2021415928705994 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16723272-16723344:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 119356 5279 VENIQRVAA True NCI_RA007_Epitope_Rep4 998.5508931142198 998.54978993586 26.857 2 0.20213297080963993 0.0006647042066280505 0.9438714419765777 ['ENSG00000173801|ENST00000393931|JUP'] 28400 16119 FSDVMEDLY True H1975_Epitope_Rep2 1117.4637774722498 1117.46268993586 67.215 2 0.20212708379399535 0.0006647042066280505 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 127480 7889 VQTEVNREL True PC9_epitope_Rep5 1086.56693710118 1086.5658499358601 35.288 2 0.2021030094702171 0.0006647042066280505 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 113932 14810 TRISNDLEL True PC9_epitope_Rep3 1059.5560380643099 1059.5549499358601 62.101 2 0.20210193751141947 0.0006647042066280505 0.9438714419765777 ['ENSG00000007047|ENST00000262891|MARK4'] 24735 17105 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.4960299358602 70.619 2 0.2020987165571099 0.0006647042066280505 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 34613 12250 GQIDADELQRC True PC9_epitope_Rep5 1246.5612000977399 1246.56010993586 52.107 2 0.20209859099586677 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000489079.1_1_7:87840172-87856229:-|nuORF', 'ENST00000488015.5_1_7:87840172-87849341:-|nuORF'] 64972 6709 LSDDHGASWRY True H1975_Epitope_Rep2 1305.5738133867699 1305.57217490379 30.718 3 0.2020916576521731 0.0006647042066280505 0.9438714419765777 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 17454 18504 EHGIVVFSL True PC9_epitope_Rep6 999.5389314481899 999.53782993586 83.817 2 0.20208827453021685 0.0006647042066280505 0.9438714419765777 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 25893 8889 FGIGQDIQPK True NCI_RA007_Epitope_Rep5 1101.58185888933 1101.5807699358602 40.854 2 0.20208581795357508 0.0006647042066280505 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 8468 4251 ATTAIAIHR True NCI_RA007_Epitope_Rep4 952.5454138109599 952.54430993586 22.676 2 0.20208390915187366 0.0006647042066280505 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF'] 33789 14930 GLSTEGIYRV True PC9_epitope_Rep5 1093.57677350889 1093.57566993586 62.433 2 0.20208145266778493 0.0006647042066280505 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 84647 13298 QHEEFVTSL True PC9_epitope_Rep4 1088.51383889916 1088.51274993586 59.048 2 0.20207951899220608 0.0006647042066280505 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 140583 18932 YYLTDVDRI True PC9_epitope_Rep5 1156.5764391557198 1156.57534993586 77.845 2 0.20207872063412785 0.0006647042066280505 0.9438714419765777 ['ENSG00000088256|ENST00000078429|GNA11'] 76710 12043 NTPEYMEKI True PC9_epitope_Rep2 1123.52196105471 1123.5208699358602 51.64 2 0.20207699342979857 0.0006647042066280505 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 99995 21215 SLITLIEKV True PC9_epitope_Rep2 1014.6324974798599 1014.63140993586 87.062 2 0.202076026160002 0.0006647042066280505 0.9438714419765777 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 55438 15410 LATRALPEL True PC9_epitope_Rep5 982.5811306133398 982.58002993586 64.283 2 0.20207039270615876 0.0006647042066280505 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 24457 7690 FAHTNVESL True NCI_RA007_Epitope_Rep4 1016.4927095317599 1016.49160993586 36.242 2 0.2020699218967479 0.0006647042066280505 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 89498 4322 REQPPTGGNLA True H1975_Epitope_Rep3 1138.57308511078 1138.57198993586 21.741 2 0.202061011485333 0.0006647042066280505 0.9438714419765777 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 72347 7108 MTDTYRLKY True H1975_Epitope_Rep2 1189.5801446371697 1189.5784949037902 32.271 3 0.20205577504818217 0.0006647042066280505 0.9438714419765777 ['ENSG00000145390|ENST00000692078|USP53'] 106150 16191 SVPDPELIKTV True PC9_epitope_Rep4 1196.66525416012 1196.66414993586 70.221 2 0.20203331645734876 0.0006647042066280505 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 69855 20333 LYANMFERL True PC9_epitope_Rep3 1155.57466533391 1155.5735699358602 83.46 2 0.20202708307916167 0.0006647042066280505 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 135884 11685 YESEWTNEV True H1975_Epitope_Rep2 1155.47203365683 1155.47147496793 50.019 1 0.20202636666677545 0.0006647042066280505 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.K581N|1|0.19|ENSG00000151348|chr11:44232433-44232433|G/T|missense_variant'] 125594 19527 VMAPRALLL True PC9_epitope_Rep3 982.5997578829398 982.59866993586 80.342 2 0.20202613767175856 0.0006647042066280505 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 91654 12850 RPFQSLIHA True PC9_epitope_Rep1 1067.58761297611 1067.58650993586 54.302 2 0.2020254254474238 0.0006647042066280505 0.9438714419765777 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 17618 7574 EHNDLQYAA True PC9_epitope_Rep5 1059.46213767947 1059.46104993586 34.082 2 0.20202483626001558 0.0006647042066280505 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 103789 17951 SRFPYYNSL True PC9_epitope_Rep5 1145.55055876105 1145.54946993586 74.064 2 0.20202152069674736 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-4|DENND3', 'ENST00000518198.1_1_8:142138775-142151424:+|nuORF'] 106147 17492 SVPDPELIKTV True PC9_epitope_Rep3 1196.66525416012 1196.66414993586 72.46 2 0.2020193494158981 0.0006647042066280505 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 84097 9040 QEQFNSIAA True H1975_Epitope_Rep3 1006.4719740871798 1006.47086993586 39.76 2 0.20201672607244567 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 33040 7318 GKAKTIIQL True NCI_RA007_Epitope_Rep4 970.6175161220599 970.61640993586 34.787 2 0.2020069759871933 0.0006647042066280505 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 93853 20245 RVFSDIIYTV True PC9_epitope_Rep2 1211.65502382959 1211.65392993586 83.292 2 0.20200409699720795 0.0006647042066280505 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 112326 19133 TMLGKFYHF True PC9_epitope_Rep1 1142.55828699378 1142.5566449037901 78.387 3 0.2020020508223361 0.0006647042066280505 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 27638 23037 FQAEIAQLMSL True PC9_epitope_Rep2 1249.63765951329 1249.63656993586 94.105 2 0.20199589504207335 0.0006647042066280505 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 86756 20467 QRLINLVGESL True PC9_epitope_Rep5 1240.7139356880398 1240.71282993586 83.763 2 0.20199550908685737 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 39863 19628 HQIDLIVQL True PC9_epitope_Rep4 1077.61824439805 1077.6171499358602 83.615 2 0.20198091500379967 0.0006647042066280505 0.9438714419765777 ['ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 129365 12394 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.5222499358601 52.759 2 0.2019763843476063 0.0006647042066280505 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 20599 11996 EQEPEPHLL True PC9_epitope_Rep4 1090.5294889632999 1090.52838993586 53.937 2 0.20196756106323807 0.0006647042066280505 0.9438714419765777 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1'] 84895 16205 QHSITPLAL True PC9_epitope_Rep1 978.5498304850599 978.54872993586 67.149 2 0.201964466582327 0.0006647042066280505 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 18276 7127 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1176.6060254122801 1176.60547496793 31.712 1 0.2019635574103955 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 115285 13908 TVDNVQPLLY True H1975_Epitope_Rep1 1160.607739284 1160.60664993586 58.649 2 0.20196309311326832 0.0006647042066280505 0.9438714419765777 ['ENSG00000145332|ENST00000273963|KLHL8'] 107304 8448 SYRDSYESY True PC9_epitope_Rep2 1168.4672826295598 1168.46618993586 37.863 2 0.20196032185914664 0.0006647042066280505 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 49001 15669 KFIDPIYQVW True NCI_RA007_Epitope_Rep3 1307.69140933831 1307.6903099358601 69.254 2 0.2019457679722572 0.0006647042066280505 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 81481 22290 PQPDVFPLF True PC9_epitope_Rep4 1058.54368247546 1058.5425899358602 93.978 2 0.20191876140409157 0.0006647042066280505 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 72306 16375 MSELPEEVLEY True H1975_Epitope_Rep2 1337.6060846014898 1337.6049899358602 68.207 2 0.20191334628898974 0.0006647042066280505 0.9438714419765777 ['ENSG00000037637|ENST00000375592|FBXO42', 'ENST00000478089.1_1_1:16621266-16641853:-|nuORF'] 17597 14984 EHLQVITTL True PC9_epitope_Rep6 1052.5866099166 1052.58550993586 69.649 2 0.2019095998415151 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 17447 16372 EHGDQDYIW True PC9_epitope_Rep5 1161.47270236317 1161.4716099358602 67.971 2 0.2019068947583897 0.0006647042066280505 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 36189 20107 GVFPDNFVKL True PC9_epitope_Rep4 1134.60734536118 1134.6062499358602 85.476 2 0.20190656767950688 0.0006647042066280505 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 60950 10351 LLADPTGAFGK True H1975_Epitope_Rep1 1088.5866099165999 1088.58550993586 44.762 2 0.20190267843343257 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 62665 20556 LLVVYPWTQR True PC9_epitope_Rep3 1273.7182927924898 1273.71718993586 84.332 2 0.20189747025990473 0.0006647042066280505 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070', 'ENSG00000213934|ENST00000330597|HBG1', 'ENSG00000213931|ENST00000396895|HBE1', 'ENSG00000196565|ENST00000336906|HBG2', 'CON__Q3SX09'] 84891 21399 QHSIPVFIF True PC9_epitope_Rep5 1086.58621599378 1086.5851099358601 87.374 2 0.20189706608965646 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496255-118496735:-|nuORF'] 6675 8911 AQAPDLQRV True PC9_epitope_Rep3 996.5352430500799 996.53414993586 39.228 2 0.2018946212913484 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 77096 14527 NYAFLHRTL True PC9_epitope_Rep1 1133.59817765981 1133.59654490379 60.703 3 0.20188609084424872 0.0006647042066280505 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 93961 4090 RVLSSIEQK True NCI_RA007_Epitope_Rep4 1058.60840799034 1058.60730993586 22.01 2 0.20186434721924326 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 107559 9044 TADVHGLYY True H1975_Epitope_Rep2 1037.48181049489 1037.4807099358602 39.741 2 0.20186155145123638 0.0006647042066280505 0.9438714419765777 ['ENST00000476493.5_1_1:33099602-33116090:-|nuORF'] 73024 11998 NDEELNKLLGK True PC9_epitope_Rep6 1271.6721304457099 1271.67049490379 57.43 3 0.20185739751855453 0.0006647042066280505 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 124176 18149 VLADALKSI True PC9_epitope_Rep5 928.5593325396001 928.55822993586 74.818 2 0.20185547499258577 0.0006647042066280505 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 11580 15218 DGTGVVEFVR True PC9_epitope_Rep2 1077.5454733806098 1077.54436993586 63.8 2 0.20184994324414998 0.0006647042066280505 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 36411 21872 GVIDLIFEKA True PC9_epitope_Rep3 1103.62266107215 1103.6215699358602 89.434 2 0.20184449631387358 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 72129 17696 MRENQITISL True PC9_epitope_Rep5 1203.6281574587497 1203.6270699358602 73.083 2 0.2018369981204138 0.0006647042066280505 0.9438714419765777 ['ENST00000264779.6_1_5:56531811-56531844:+|nuORF'] 114046 15856 TRNDYVMMY True PC9_epitope_Rep1 1191.50526544475 1191.50416993586 65.802 2 0.2018369743649753 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 41608 11464 IDFVGELNDK True H1975_Epitope_Rep1 1148.5713537752797 1148.5702499358601 49.078 2 0.20183333026644193 0.0006647042066280505 0.9438714419765777 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'nc|ENSG00000274487|A6NEC2|NPEPPSL1', 'nc|ENSG00000274487|A6NEC2-3|NPEPPSL1'] 28941 13026 FTEQWTDGY True H1975_Epitope_Rep1 1145.4665543535698 1145.46544993586 55.187 2 0.201832041737431 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 41119 20863 HYNSDLNNLLF True PC9_epitope_Rep1 1348.6411646706 1348.64006993586 85.074 2 0.2018199272003294 0.0006647042066280505 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 113188 9269 TQDGTWRTV True PC9_epitope_Rep5 1062.50942222506 1062.50832993586 40.603 2 0.2018194050758649 0.0006647042066280505 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 107364 20328 SYSHIMALI True PC9_epitope_Rep3 1033.52665251233 1033.52554993586 83.441 2 0.20181448304238825 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 84561 8678 QHDDQQPVVL True PC9_epitope_Rep6 1177.5727507576098 1177.57164993586 43.225 2 0.2018114232376896 0.0006647042066280505 0.9438714419765777 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 83171 11088 PYTKVEESF True PC9_epitope_Rep2 1098.5233409536997 1098.5222499358601 47.976 2 0.20180761912028602 0.0006647042066280505 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 67301 11707 LTDPIQGTEY True H1975_Epitope_Rep2 1135.53971929383 1135.5386299358602 50.106 2 0.20180509035760555 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 77404 19505 NYLVLPNRI True PC9_epitope_Rep1 1100.63422881536 1100.63312993586 79.844 2 0.201803973804245 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 4407 13145 AIVDKVPSV True PC9_epitope_Rep1 926.54368247546 926.54258993586 55.427 2 0.2018036353911924 0.0006647042066280505 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 94834 13222 RYLVISEKL True PC9_epitope_Rep2 1119.66519459047 1119.6640899358601 56.135 2 0.2018001553862852 0.0006647042066280505 0.9438714419765777 ['ENSG00000116212|ENST00000371370|LRRC42'] 47394 9074 IYIKHPHLF True NCI_RA007_Epitope_Rep4 1166.66004964038 1166.6584049037901 41.737 3 0.20178549213896932 0.0006647042066280505 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 46205 8654 ITDLNSDQY True H1975_Epitope_Rep1 1067.47711903727 1067.4760299358602 38.217 2 0.2017697540822904 0.0006647042066280505 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8', 'nc|ENSG00000156671|Q96LT4-2|SAMD8'] 129404 5660 VTEIDQDKY True H1975_Epitope_Rep1 1109.5240692296898 1109.5229699358601 26.841 2 0.2017652986647407 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 75411 15008 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.52857496793 62.983 1 0.2017609436721685 0.0006647042066280505 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 17892 4989 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 24.275 2 0.20176089464503133 0.0006647042066280505 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 104908 11890 STFQQMWISK True NCI_RA007_Epitope_Rep4 1254.60669373818 1254.60558993586 52.731 2 0.2017555532932515 0.0006647042066280505 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 94849 9310 RYMPQNPHI True PC9_epitope_Rep5 1154.5654976325397 1154.5638449037901 40.763 3 0.20174918729019867 0.0006647042066280505 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 105804 14850 SVINEINKI True PC9_epitope_Rep4 1028.5866099165999 1028.58550993586 65.059 2 0.20174733328193575 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 28945 12965 FTEQWTDGY True H1975_Epitope_Rep3 1145.4665543535698 1145.46597496793 55.102 1 0.2017318394455557 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 77251 18464 NYINDLRNF True PC9_epitope_Rep4 1167.56727145435 1167.5661699358602 79.091 2 0.20172538655813155 0.0006647042066280505 0.9438714419765777 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 48845 9252 KESDIYIVA True H1975_Epitope_Rep3 1036.54407639828 1036.5429699358601 40.579 2 0.20171320515382674 0.0006647042066280505 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 123093 17549 VHAPPMQLGF True PC9_epitope_Rep4 1095.5535359665098 1095.5524299358601 75.517 2 0.2016905426304794 0.0006647042066280505 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 54140 16220 KYNANFVTF True PC9_epitope_Rep4 1102.54474510462 1102.54364993586 70.333 2 0.20168689147984922 0.0006647042066280505 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 47467 11699 IYKAPSENW True PC9_epitope_Rep2 1106.53965972418 1106.53856993586 50.333 2 0.20168655675325486 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 25656 12190 FEYILSHVA True H1975_Epitope_Rep3 1077.5494961318898 1077.54838993586 52.06 2 0.20168120834129663 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8'] 132976 19478 VYVDLGGSHVF True PC9_epitope_Rep2 1191.5924235730301 1191.5913299358601 80.302 2 0.20167759671597818 0.0006647042066280505 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 9013 14186 AVIDVGINRV True PC9_epitope_Rep6 1054.61349337078 1054.6123899358602 66.448 2 0.2016741415312391 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 21226 16939 ERFNVPVSL True PC9_epitope_Rep6 1059.5712942056298 1059.57018993586 77.7 2 0.20167284686796594 0.0006647042066280505 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 114134 5000 TRSITNTTV True PC9_epitope_Rep4 991.52982331647 991.52872993586 25.85 2 0.2016695686823658 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 67242 17272 LTDLVDDNYFY True H1975_Epitope_Rep1 1376.6136125100802 1376.61250993586 71.899 2 0.20165977959578624 0.0006647042066280505 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 54328 15817 KYQDVYVEL True PC9_epitope_Rep4 1155.5811901829898 1155.58008993586 68.765 2 0.20165086322405307 0.0006647042066280505 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 126717 7593 VPRQPTVTSV True PC9_epitope_Rep4 1082.60840799034 1082.60730993586 36.588 2 0.201648098618702 0.0006647042066280505 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5'] 90550 10179 RKFLETVEL True NCI_RA007_Epitope_Rep5 1133.6444591458899 1133.6433699358602 45.787 2 0.20164451081072127 0.0006647042066280505 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 14674 6847 DVNQQEFVR True H1975_Epitope_Rep3 1133.5465360097699 1133.54542993586 31.294 2 0.20163880119020422 0.0006647042066280505 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 24493 21714 FAIPLIEKL True PC9_epitope_Rep3 1042.64266824074 1042.6415699358602 88.816 2 0.2016295273260539 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 89040 6251 REEEYVAPP True H1975_Epitope_Rep3 1088.5138388991597 1088.51274993586 29.056 2 0.20162669556066912 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000056972|O43734-4|TRAF3IP2', 'nc|ENSG00000056972|O43734-3|TRAF3IP2', 'nc|ENSG00000056972|O43734-5|TRAF3IP2', 'ENSG00000056972|ENST00000368761|TRAF3IP2', 'nc|ENSG00000056972|O43734|TRAF3IP2'] 135561 7774 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 34.85 2 0.2016137141920626 0.0006647042066280505 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 26711 7835 FLDESRSTQY True H1975_Epitope_Rep3 1244.567331024 1244.56622993586 35.114 2 0.20160978376082234 0.0006647042066280505 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 54242 20821 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61098993586 88.239 2 0.20160832187872135 0.0006647042066280505 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 138337 7676 YRAQPSASL True PC9_epitope_Rep5 991.5086939490699 991.50758993586 34.469 2 0.20160733219232627 0.0006647042066280505 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 107313 13359 SYREDPIVY True PC9_epitope_Rep3 1140.5451390274397 1140.5440499358601 56.419 2 0.20160384645460108 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 21071 9486 ERDMSNVSL True PC9_epitope_Rep4 1049.48115887189 1049.48006993586 44.101 2 0.2015988540575292 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 25836 19533 FGFEITHEV True PC9_epitope_Rep5 1077.51311062317 1077.51200993586 80.186 2 0.2015949560661517 0.0006647042066280505 0.9438714419765777 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 2099 10995 AELNEFLTR True NCI_RA007_Epitope_Rep5 1091.56112344475 1091.56002993586 48.928 2 0.201585794566872 0.0006647042066280505 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 39676 9550 HPTEDLVVSA True PC9_epitope_Rep4 1066.5294889632999 1066.52838993586 44.348 2 0.20158050029420682 0.0006647042066280505 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 60606 7361 LISNASDALDK True NCI_RA007_Epitope_Rep2 1145.5928174958499 1145.59172993586 33.257 2 0.20157713016571216 0.0006647042066280505 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 76318 5734 NSEEM[Oxidation]KEAYY True H1975_Epitope_Rep2 1278.5074335698198 1278.50632993586 27.054 2 0.2015750854239641 0.0006647042066280505 0.9438714419765777 ['ENST00000581339.1_1_18:21053400-21057068:+|nuORF', 'ENST00000581302.5_1_18:21033283-21057068:+|nuORF', 'nc|ENSG00000101782|O14730-2|RIOK3', 'ENSG00000101782|ENST00000339486|RIOK3'] 102558 11771 SQANIAQVL True NCI_RA007_Epitope_Rep4 942.5134449763399 942.51289496793 52.251 1 0.2015716436020249 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 15205 13294 EAFNMIDQNR True PC9_epitope_Rep3 1236.5557207944798 1236.55462993586 56.169 2 0.2015663201073728 0.0006647042066280505 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 109578 10251 THDDSHLVSL True PC9_epitope_Rep1 1122.5305515924601 1122.5289149037899 44.313 3 0.20156021826372975 0.0006647042066280505 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 64528 8266 LRDEHNYTL True PC9_epitope_Rep1 1159.56218607391 1159.56055490379 36.628 3 0.20155295485119493 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 78915 18341 PFAKPLPTF True PC9_epitope_Rep5 1016.5695033004799 1016.56840993586 75.563 2 0.2015487963243769 0.0006647042066280505 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 85156 21263 QIYDIFQKL True PC9_epitope_Rep3 1166.6335601090198 1166.6324699358602 87.081 2 0.20154750189326653 0.0006647042066280505 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 95072 18068 RYSNLILNLF True NCI_RA007_Epitope_Rep4 1251.69755734791 1251.69646993586 78.186 2 0.2015360956383025 0.0006647042066280505 0.9438714419765777 ['ENSG00000078142|ENST00000262039|PIK3C3', 'ENST00000587328.2_1_18:39644671-39661098:+|nuORF'] 140593 16139 YYLTPDGQRF True PC9_epitope_Rep2 1258.59823722946 1258.5971499358602 67.336 2 0.20152534501883504 0.0006647042066280505 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 26644 20734 FLAEDALNTV True PC9_epitope_Rep2 1091.54989005471 1091.5487899358602 85.191 2 0.20152300664075895 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 2508 11581 AEQQERFFMP True H1975_Epitope_Rep2 1281.5812072663298 1281.58010993586 49.611 2 0.20151450746613203 0.0006647042066280505 0.9438714419765777 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF'] 140675 14942 YYPSTPGRYSI True PC9_epitope_Rep5 1302.6244519773 1302.62334993586 62.478 2 0.20150229405023215 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 116811 20708 TYLSIIHSL True PC9_epitope_Rep3 1045.58079626017 1045.5796899358602 84.929 2 0.20149579139426538 0.0006647042066280505 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 113686 8936 TRDETNYGI True PC9_epitope_Rep1 1067.4883524273098 1067.48724993586 39.213 2 0.20149139923072704 0.0006647042066280505 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 14521 11776 DVAASEFFR True H1975_Epitope_Rep1 1040.4927095317598 1040.4916099358602 50.288 2 0.20149116707638204 0.0006647042066280505 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 51991 9611 KLDVQFSGLTK True NCI_RA007_Epitope_Rep1 1234.6921376142998 1234.69048490379 41.382 3 0.20148931813600476 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 93952 12754 RVLQALEGLK True PC9_epitope_Rep2 1125.6869926642098 1125.6858899358601 54.363 2 0.20147725160148433 0.0006647042066280505 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 70988 6108 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep2 1282.5975859869 1282.59648993586 28.472 2 0.20147684318931855 0.0006647042066280505 0.9438714419765777 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 44093 9546 ILMEHIHKL True PC9_epitope_Rep2 1132.64268532408 1132.64104490379 42.065 3 0.20147666506162115 0.0006647042066280505 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 29598 20101 FVLDHEDGLNL True PC9_epitope_Rep2 1270.61936659686 1270.61826993586 82.727 2 0.20147642886108216 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 114221 8709 TRVSQINTL True PC9_epitope_Rep2 1030.5771078620598 1030.5760099358602 38.861 2 0.20147502081442756 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 96362 8912 SEGFAVIKEA True H1975_Epitope_Rep1 1049.53932537101 1049.53822993586 39.183 2 0.20147067090565965 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 40418 19329 HRYEFLETL True PC9_epitope_Rep5 1206.6033226098998 1206.6022299358601 79.394 2 0.20146987963999544 0.0006647042066280505 0.9438714419765777 ['ENSG00000163545|ENST00000367157|NUAK2'] 47397 15041 IYIKHPHLF True PC9_epitope_Rep1 1166.66004964038 1166.6584049037901 62.674 3 0.20146979861914577 0.0006647042066280505 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 27699 16138 FQDKDQVFI True PC9_epitope_Rep3 1138.56587447202 1138.56476993586 67.223 2 0.20146898762868293 0.0006647042066280505 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 70398 22923 LYQFNPAFF True PC9_epitope_Rep3 1145.5545815123298 1145.5534899358602 93.441 2 0.2014631582455138 0.0006647042066280505 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 54427 18356 KYSPFVVSF True PC9_epitope_Rep6 1072.5593325396 1072.55822993586 83.25 2 0.20145896117698453 0.0006647042066280505 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 26992 18544 FLLDPVKGERL True PC9_epitope_Rep5 1285.73942215989 1285.73776490379 76.353 3 0.20145102069430673 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 123624 15137 VILEGELERA True PC9_epitope_Rep5 1127.6186383208699 1127.61754993586 63.23 2 0.20144161590327864 0.0006647042066280505 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 103254 11904 SQSTVKVLI True PC9_epitope_Rep2 973.5807962601699 973.57968993586 51.113 2 0.20143992053449727 0.0006647042066280505 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 61285 18387 LLDTPAQLWY True H1975_Epitope_Rep2 1218.62847472858 1218.62736993586 76.273 2 0.20143824958053097 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF', 'ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 72684 17338 MYINEVERL True PC9_epitope_Rep2 1165.58014463717 1165.5790499358602 71.945 2 0.2014375832498467 0.0006647042066280505 0.9438714419765777 ['ENSG00000152104|ENST00000366956|PTPN14', 'PTPN14|p.H1030Afs*47|1|0.17|ENSG00000152104|chr1:214369641-214369642|-/T|frameshift_variant', 'PTPN14|p.D213Y|1|0.54|ENSG00000152104|chr1:214401717-214401717|C/A|missense_variant'] 31569 10188 GEFSITYKP True H1975_Epitope_Rep2 1040.5178616504397 1040.51676993586 44.191 2 0.2014341853812801 0.0006647042066280505 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 31919 12971 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.4912699358601 54.97 2 0.20143224537000012 0.0006647042066280505 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 47937 14257 IYYTGKYQSL True PC9_epitope_Rep5 1234.6233893481399 1234.6222899358602 59.844 2 0.20142804221998573 0.0006647042066280505 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 87941 4509 QVQAAQFAK True NCI_RA007_Epitope_Rep3 989.5294293936498 989.52832993586 24.589 2 0.2014267870026691 0.0006647042066280505 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1'] 117454 12501 VADTVARVL True PC9_epitope_Rep3 942.5498304850598 942.54872993586 53.111 2 0.2014216597225852 0.0006647042066280505 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 106105 9162 SVNFSEFSK True NCI_RA007_Epitope_Rep4 1043.4923751785898 1043.4912699358601 42.081 2 0.2014203747691903 0.0006647042066280505 0.9438714419765777 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000559968.1_1_14:68082236-68082464:+|nuORF'] 28603 12670 FSQPENQNLLY True H1975_Epitope_Rep2 1351.64083031743 1351.63972993586 53.835 2 0.20141609052322546 0.0006647042066280505 0.9438714419765777 ['ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-3|FANCD2'] 71320 19963 MHFLENISL True PC9_epitope_Rep4 1102.5481162329 1102.5470099358602 84.921 2 0.2014125535563156 0.0006647042066280505 0.9438714419765777 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 124979 16501 VLNEYFHNV True PC9_epitope_Rep5 1133.5505587610498 1133.54946993586 68.469 2 0.20141158688118918 0.0006647042066280505 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 67090 7404 LTDADAMKY True H1975_Epitope_Rep2 1026.46919720586 1026.46808993586 33.423 2 0.20140057859421892 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A'] 135216 9386 YAYDGKDYL True NCI_RA007_Epitope_Rep3 1106.4920408254197 1106.49094993586 44.009 2 0.2013951810494181 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 60223 12322 LIDFLESGK True H1975_Epitope_Rep3 1020.54916177872 1020.54806993586 52.579 2 0.20138257452787361 0.0006647042066280505 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF'] 22375 7049 ETERIVTTY True H1975_Epitope_Rep2 1110.5557037111398 1110.55460993586 32.041 2 0.20138092946437744 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000587329.1_1_19:10909095-10913035:+|nuORF'] 27673 16721 FQDENHLYL True PC9_epitope_Rep3 1177.54038800017 1177.53928993586 69.456 2 0.20137659172705966 0.0006647042066280505 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 46938 22043 IVLPEDLQL True PC9_epitope_Rep2 1038.5961119711399 1038.5950099358602 90.26 2 0.20137159983305256 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 61284 18269 LLDTPAQLWY True H1975_Epitope_Rep1 1218.62847472858 1218.62736993586 76.135 2 0.2013699186091232 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF', 'ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 3974 14554 AHESAVTGLSL True PC9_epitope_Rep1 1083.55603806431 1083.5549499358601 60.806 2 0.20135690125563746 0.0006647042066280505 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 139849 21628 YVDPLDPSF True PC9_epitope_Rep3 1051.48622716899 1051.4851299358602 88.491 2 0.20135051082688527 0.0006647042066280505 0.9438714419765777 ['ENST00000472446.1_1_17:17412858-17494940:-|nuORF', 'nc|ENSG00000133027|Q9UBM1|PEMT', 'nc|ENSG00000133027|Q9UBM1-3|PEMT', 'ENSG00000133027|ENST00000255389|PEMT'] 114920 7901 TTEVHPELY True H1975_Epitope_Rep3 1087.5185899264297 1087.51807496793 35.365 1 0.20134379327285673 0.0006647042066280505 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 139632 5937 YTSDSPGSY True H1975_Epitope_Rep2 975.38215602327 975.38160496793 27.821 1 0.20134254769652418 0.0006647042066280505 0.9438714419765777 ['ENSG00000160877|ENST00000292431|NACC1'] 89099 6480 REFDNMAKV True NCI_RA007_Epitope_Rep4 1108.5335287979199 1108.5324299358601 31.522 2 0.20133461308503264 0.0006647042066280505 0.9438714419765777 ['ENSG00000133142|ENST00000472484|TCEAL4', 'nc|ENSG00000133142|Q96EI5-2|TCEAL4'] 111162 8271 TLETVPLER True H1975_Epitope_Rep3 1056.5815245361598 1056.5804299358601 36.796 2 0.2013287752142399 0.0006647042066280505 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1'] 48844 9363 KESDIYIVA True H1975_Epitope_Rep2 1036.54407639828 1036.5429699358601 40.976 2 0.20131970977281716 0.0006647042066280505 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 104322 11248 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45284993586 48.309 2 0.20130954771668866 0.0006647042066280505 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 135698 11077 YEILTPNSIPK True H1975_Epitope_Rep1 1273.69180326113 1273.69070993586 47.571 2 0.20130593047015718 0.0006647042066280505 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 65298 5317 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6222899358602 25.503 2 0.20130107566178151 0.0006647042066280505 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 13405 8897 DNLAEDIM[Oxidation]R True NCI_RA007_Epitope_Rep1 1091.49172393603 1091.4906299358602 38.608 2 0.20130011320982422 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 10097 18855 AYVLNIVRF True PC9_epitope_Rep6 1093.62841515893 1093.62730993586 85.174 2 0.2012950764424552 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 54437 16080 KYTKIFNDF True PC9_epitope_Rep1 1174.60225998074 1174.60116993586 66.666 2 0.20129221375264925 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 113831 12625 TREEGTPLTL True PC9_epitope_Rep1 1115.5822528121498 1115.5811499358601 53.432 2 0.20129048233339422 0.0006647042066280505 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 73776 16427 NHDFQALAL True PC9_epitope_Rep4 1027.50869394907 1027.50758993586 71.147 2 0.20127541591513096 0.0006647042066280505 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 32502 10566 GGNFGFGDSR True PC9_epitope_Rep5 1012.4362572847999 1012.43516993586 45.631 2 0.20127203792250717 0.0006647042066280505 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 27721 21025 FQDPVPLTV True PC9_epitope_Rep5 1014.5385970950199 1014.53807496793 85.93 1 0.2012713386988702 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 103527 10781 SRDDNM[Oxidation]FQI True PC9_epitope_Rep6 1140.48697290876 1140.4858699358601 52.3 2 0.20126972005241148 0.0006647042066280505 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 69973 22659 LYEQAFQLL True PC9_epitope_Rep5 1123.5913609438699 1123.59026993586 92.159 2 0.2012641804557634 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 108834 4947 TEQRNVYKDL True H1975_Epitope_Rep2 1264.6411646706 1264.63951490379 24.111 3 0.20126269214953965 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF'] 76330 5340 NSELGSETRY True H1975_Epitope_Rep2 1154.52038083158 1154.5192899358601 25.59 2 0.20124036868122355 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-7|YY1AP1', 'ENST00000442834.6_1_1:155629450-155640310:-|nuORF'] 33815 7446 GLTSVINQK True NCI_RA007_Epitope_Rep2 958.5447451046199 958.54364993586 33.589 2 0.20123753501494773 0.0006647042066280505 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 67106 11869 LTDDDLLRY True H1975_Epitope_Rep1 1122.55570371114 1122.55460993586 50.652 2 0.2012347103980691 0.0006647042066280505 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 21844 6504 ESEAVEWQQK True NCI_RA007_Epitope_Rep2 1232.5673310239997 1232.56622993586 29.908 2 0.2012271370478684 0.0006647042066280505 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'MSN|p.K438M|1|0.12|ENSG00000147065|chrX:65738586-65738586|A/T|missense_variant'] 72396 8842 MTEKQLNLY True H1975_Epitope_Rep3 1138.5692456002998 1138.5681499358602 39.017 2 0.2012243948718962 0.0006647042066280505 0.9438714419765777 ['ENSG00000167985|ENST00000301761|SDHAF2', 'ENST00000536250.1_1_11:61204372-61205638:+|nuORF', 'ENSG00000256591|ENST00000541135|unknown'] 135616 6146 YEENSHLTSV True H1975_Epitope_Rep3 1177.52513185885 1177.5240299358602 28.651 2 0.20122397970708275 0.0006647042066280505 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2'] 9771 17913 AYLEAYKEF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 73.694 2 0.20121835746680983 0.0006647042066280505 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 37819 10673 HDDYLVM[Oxidation]LK True PC9_epitope_Rep4 1148.5535959166 1148.5524899358602 48.8 2 0.20120845781225022 0.0006647042066280505 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 113016 15357 TPTPVPVV True PC9_epitope_Rep2 808.4694549060399 808.46890496793 64.353 1 0.2011976290925559 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 54030 9380 KYLSGIAHF True NCI_RA007_Epitope_Rep4 1034.5549158654999 1034.55380993586 42.935 2 0.20118318933590318 0.0006647042066280505 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 106098 20251 SVNDIFERI True PC9_epitope_Rep1 1091.56112344475 1091.56002993586 82.724 2 0.20118212611096836 0.0006647042066280505 0.9438714419765777 ['H2BC8|p.F66S|1|0.36|ENSG00000273802|chr6:26216447-26216447|A/G|missense_variant'] 29652 21486 FVMETFVHL True PC9_epitope_Rep1 1121.55795264061 1121.55684993586 87.489 2 0.20117245517215757 0.0006647042066280505 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 10085 7927 AYVHM[Oxidation]VTHF True PC9_epitope_Rep2 1119.5171508382302 1119.51604993586 35.856 2 0.20117127972966478 0.0006647042066280505 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 111380 16583 TLITDGMRSV True PC9_epitope_Rep1 1091.56449457303 1091.5633899358602 68.611 2 0.2011673906295675 0.0006647042066280505 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000397477.2_1_22:32665833-32665884:+|nuORF'] 29442 15792 FVHDLVLYL True NCI_RA007_Epitope_Rep3 1117.6171817688898 1117.6160899358601 69.755 2 0.20116536281590164 0.0006647042066280505 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 1575 13121 AEFARIMSI True NCI_RA007_Epitope_Rep4 1036.5375515491999 1036.5364499358602 57.568 2 0.20116120083031835 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 89189 12116 REIEELLAEA True NCI_RA007_Epitope_Rep3 1171.6084675599898 1171.60736993586 54.772 2 0.20115815964034717 0.0006647042066280505 0.9438714419765777 ['ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF', 'nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10'] 17451 20645 EHGIVVFSL True PC9_epitope_Rep3 999.5389314481899 999.53782993586 84.682 2 0.20115448452128834 0.0006647042066280505 0.9438714419765777 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 49335 9027 KIDENQLMY True H1975_Epitope_Rep1 1152.54851015572 1152.54740993586 39.629 2 0.20114554779937766 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN', 'ERBIN|p.D635Mfs*50|1|0.47|ENSG00000112851|chr5:66048775-66048775|A/-|frameshift_variant', 'ERBIN|p.G1049Afs*21|1|0.18|ENSG00000112851|chr5:66054463-66054463|G/-|frameshift_variant'] 53071 11376 KSDEMELLY True H1975_Epitope_Rep3 1126.5216267015398 1126.5205299358602 48.869 2 0.20114067450627185 0.0006647042066280505 0.9438714419765777 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000493082.5_1_5:850626-880074:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-2|BRD9', 'ENST00000495794.5_1_5:864585-881375:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-3|BRD9', 'nc|ENSG00000028310|Q9H8M2-1|BRD9', 'ENST00000495265.5_1_5:864585-889814:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-6|BRD9'] 89057 8823 REEGPYEVEV True H1975_Epitope_Rep2 1205.55643198713 1205.55532993586 38.904 2 0.20113460696263152 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 21589 4058 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 22.458 2 0.20112103955686636 0.0006647042066280505 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 71250 6154 M[Oxidation]GESDDSILR True NCI_RA007_Epitope_Rep5 1137.49720323929 1137.4961099358602 30.351 2 0.201119479309194 0.0006647042066280505 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 1897 13642 AEILELAGNAA True H1975_Epitope_Rep2 1070.5607890915799 1070.5596899358602 57.614 2 0.20111260506907783 0.0006647042066280505 0.9438714419765777 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 107330 20414 SYRELFEFF True PC9_epitope_Rep6 1236.5815245361598 1236.5804299358601 91.226 2 0.20111013700806743 0.0006647042066280505 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 127474 7055 VQTEVNREL True PC9_epitope_Rep2 1086.56693710118 1086.5658499358601 32.535 2 0.20110222556388385 0.0006647042066280505 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 6722 20860 AQDEHLITFF True PC9_epitope_Rep2 1219.58733819259 1219.58624993586 85.683 2 0.20108797510424758 0.0006647042066280505 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 42621 15059 IETIEVMEDR True PC9_epitope_Rep3 1233.59110324369 1233.59000993586 63.055 2 0.2010808724112375 0.0006647042066280505 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 109919 14938 THQTIVVQL True PC9_epitope_Rep3 1037.58694426977 1037.58584993586 62.592 2 0.20107245212989588 0.0006647042066280505 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 139068 20044 YSLEKVFGI True PC9_epitope_Rep4 1054.5698972233 1054.5688099358601 85.236 2 0.20106467616990586 0.0006647042066280505 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 34968 5247 GQYGNPLNK True NCI_RA007_Epitope_Rep3 989.4930438849299 989.49194993586 27.642 2 0.20106376217552827 0.0006647042066280505 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 47410 11435 IYIKHPHLF True PC9_epitope_Rep6 1166.66004964038 1166.6584049037901 55.047 3 0.20106255584220695 0.0006647042066280505 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 103891 13043 SRLPEQVEL True PC9_epitope_Rep4 1069.57677350889 1069.57566993586 58.063 2 0.20103746615347257 0.0006647042066280505 0.9438714419765777 ['ENSG00000177666|ENST00000336615|PNPLA2', 'nc|ENSG00000177666|Q96AD5-2|PNPLA2'] 104896 8078 STFNQVVLK True NCI_RA007_Epitope_Rep3 1034.5760452328998 1034.57494993586 38.865 2 0.2010314248856175 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 23869 19776 EYMEHVYLI True PC9_epitope_Rep2 1195.5583465634297 1195.55724993586 81.455 2 0.2010297265205615 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 94998 15426 RYQDIIHSI True PC9_epitope_Rep3 1143.6036569630699 1143.6020249037902 64.491 3 0.20101932757866933 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 14732 11685 DVTGAEALLER True H1975_Epitope_Rep3 1172.60371653272 1172.60260993586 50.085 2 0.20101488022045663 0.0006647042066280505 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 127362 12192 VQPSKYHFL True PC9_epitope_Rep3 1117.5920296502102 1117.59092993586 51.929 2 0.20101206907130229 0.0006647042066280505 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 56496 4814 LDTNADKQLS True NCI_RA007_Epitope_Rep4 1103.54586730343 1103.5447699358601 24.951 2 0.20101040619757896 0.0006647042066280505 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 7909 5520 ATAVM[Oxidation]PDGQFK True H1975_Epitope_Rep3 1179.5594095730296 1179.55830993586 26.28 2 0.20100697430208095 0.0006647042066280505 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 75409 15101 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.5279899358602 63.343 2 0.20099495130249276 0.0006647042066280505 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 27768 19207 FQEEDFPAL True PC9_epitope_Rep6 1094.4920408254197 1094.49094993586 86.532 2 0.20098645982668098 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 105721 12298 SVHKGFAFV True PC9_epitope_Rep5 990.5287011176598 990.52760993586 52.295 2 0.20098615566342184 0.0006647042066280505 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 106861 15469 SYIEHIFEI True NCI_RA007_Epitope_Rep3 1149.57062549929 1149.5695299358601 68.404 2 0.2009792324015712 0.0006647042066280505 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 115032 5161 TTNDIVISK True NCI_RA007_Epitope_Rep5 989.53932537101 989.53822993586 26.547 2 0.20097866957910002 0.0006647042066280505 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 14985 18866 DYSSILQKF True PC9_epitope_Rep6 1099.55497543515 1099.5538699358601 85.217 2 0.20097689709747338 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 28824 12989 FTDHELQEWY True H1975_Epitope_Rep3 1366.58298108814 1366.58188993586 55.196 2 0.20096660323976304 0.0006647042066280505 0.9438714419765777 ['ENSG00000115756|ENST00000307845|HPCAL1'] 94581 11241 RYISQPPLL True NCI_RA007_Epitope_Rep4 1085.6233297784897 1085.62222993586 50.131 2 0.2009638128790456 0.0006647042066280505 0.9438714419765777 ['ENSG00000116406|ENST00000318130|EDEM3', 'nc|ENSG00000116406|Q9BZQ6-2|EDEM3'] 102875 13618 SQHGVIIQL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 64.145 2 0.20095875328979382 0.0006647042066280505 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 138058 20903 YQDPVTLQL True PC9_epitope_Rep5 1075.55497543515 1075.5538699358601 85.459 2 0.20095723936599091 0.0006647042066280505 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 104289 14747 SSEELPLYY True H1975_Epitope_Rep2 1099.5073565363898 1099.50624993586 61.885 2 0.20095587509047938 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 96149 16443 SEEEAFGILP True H1975_Epitope_Rep2 1090.51825557326 1090.51714993586 68.467 2 0.2009508514563644 0.0006647042066280505 0.9438714419765777 ['ENST00000520503.1_1_8:33318275-33319160:-|nuORF', 'ENST00000327671.9_1_8:33311020-33319160:-|nuORF'] 73888 5435 NHHLQETSF True PC9_epitope_Rep2 1111.50467119779 1111.50356993586 26.297 2 0.20094613403559863 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 114858 13242 TTDLFGRDLSY True H1975_Epitope_Rep2 1286.6142812164198 1286.6131899358602 56.064 2 0.2009457209773308 0.0006647042066280505 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 11733 6065 DHHENKYLL True PC9_epitope_Rep2 1167.56727145435 1167.56563490379 28.724 3 0.20093996713850165 0.0006647042066280505 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 127356 16010 VQPRNWLLF True NCI_RA007_Epitope_Rep5 1171.6502132326698 1171.64910993586 68.309 2 0.20093757867870046 0.0006647042066280505 0.9438714419765777 ['ENSG00000060762|ENST00000360961|MPC1'] 106456 12277 SVVDHFNRI True PC9_epitope_Rep3 1085.56179215109 1085.5606899358602 52.249 2 0.20092899462756722 0.0006647042066280505 0.9438714419765777 ['ENSG00000103035|ENST00000219313|PSMD7', 'ENST00000566015.1_1_16:74330767-74334139:+|nuORF', 'ENST00000422197.2_1_1:51837944-51838202:+|nuORF'] 4196 21124 AIDPHLLLSV True PC9_epitope_Rep1 1076.6229954253201 1076.62188993586 86.083 2 0.20092609698761282 0.0006647042066280505 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 24051 12749 EYQELMNVK True PC9_epitope_Rep5 1152.54851015572 1152.54740993586 54.047 2 0.20092077258932914 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 138705 16753 YRVFTTQEL True PC9_epitope_Rep5 1155.5924235730297 1155.5913299358601 69.446 2 0.20091230523270565 0.0006647042066280505 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 108997 9677 TEVLKTHGLLV True NCI_RA007_Epitope_Rep4 1208.71287305888 1208.71176993586 44.071 2 0.20090662516894872 0.0006647042066280505 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A'] 25181 11272 FDVSGYPTLK True NCI_RA007_Epitope_Rep1 1125.57062549929 1125.5695299358601 47.827 2 0.20090592507223676 0.0006647042066280505 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 70108 20934 LYIVEPLKF True PC9_epitope_Rep2 1120.6532329244399 1120.65212993586 85.97 2 0.20089134519901292 0.0006647042066280505 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 38709 11554 HHSNIPMSL True PC9_epitope_Rep1 1034.49674936638 1034.49564993586 49.322 2 0.2008894760466997 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant', 'ENST00000463046.5_1_2:61417336-61434009:-|nuORF'] 138367 15213 YRDGLVEQL True PC9_epitope_Rep5 1091.56112344475 1091.56002993586 63.525 2 0.20088787388211773 0.0006647042066280505 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF'] 106870 21538 SYIEHIFEI True PC9_epitope_Rep1 1149.57062549929 1149.5695299358601 87.671 2 0.20087602303279967 0.0006647042066280505 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 48972 20357 KFAEEFYSF True PC9_epitope_Rep3 1166.5284263341398 1166.52732993586 83.552 2 0.20087516420855303 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 81239 8629 PPPAPPPPP True PC9_epitope_Rep3 865.46978925921 865.46868993586 38.143 2 0.20087382380709765 0.0006647042066280505 0.9438714419765777 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'BOD1L1|p.V1300*|1|0.17|ENSG00000038219|chr4:13603002-13603002|C/-|frameshift_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'ENST00000480400.1_1_2:175446032-175450310:-|nuORF', 'nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'nc|ENSG00000162105|Q9UPX8-1|SHANK2', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000038219|ENST00000040738|BOD1L1', 'ENSG00000162105|ENST00000601538|SHANK2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENSG00000271601|ENST00000604000|LIX1L'] 72633 10386 MVVQDGIVKA True PC9_epitope_Rep6 1058.57941636118 1058.57830993586 50.679 2 0.20087023988912214 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 9843 19594 AYLPEWKENI True PC9_epitope_Rep1 1261.6342883850098 1261.6331899358602 80.196 2 0.20085921356974276 0.0006647042066280505 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 44241 14902 ILTDITKGV True PC9_epitope_Rep2 958.5698972233 958.56880993586 62.585 2 0.2008570921824862 0.0006647042066280505 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 66585 5438 LSSPATLNSR True NCI_RA007_Epitope_Rep5 1044.5563724174801 1044.55526993586 27.606 2 0.2008544111268703 0.0006647042066280505 0.9438714419765777 ['CON__P00761'] 54342 7981 KYQEVTNNL True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 36.063 2 0.20084604714814344 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 48060 19050 KAMDDTFYL True PC9_epitope_Rep5 1102.50049733414 1102.49940993586 78.304 2 0.2008436488041483 0.0006647042066280505 0.9438714419765777 ['ENSG00000167136|ENST00000372642|ENDOG'] 67590 9955 LTETIYKNYY True H1975_Epitope_Rep3 1306.64451871554 1306.64342993586 43.325 2 0.2008421877226157 0.0006647042066280505 0.9438714419765777 ['ENSG00000146834|ENST00000310512|MEPCE', 'nc|ENSG00000289690|Q7L2J0-2|MEPCE'] 53726 15233 KYEELFPAF True NCI_RA007_Epitope_Rep5 1142.5648118428596 1142.56370993586 65.277 2 0.20083870359607947 0.0006647042066280505 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 67482 7508 LTEIKGSVY True H1975_Epitope_Rep2 1008.54916177872 1008.54806993586 33.829 2 0.20083585577715088 0.0006647042066280505 0.9438714419765777 ['ENSG00000153975|ENST00000368576|ZUP1', 'ENST00000471919.1_1_6:116981518-116989864:-|nuORF'] 88447 12747 QYTQALEKF True PC9_epitope_Rep4 1126.5658744720197 1126.56476993586 56.892 2 0.20083272831778365 0.0006647042066280505 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 38244 14218 HEYPWILSA True H1975_Epitope_Rep2 1114.54474510462 1114.54364993586 59.839 2 0.20082918028261573 0.0006647042066280505 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 53729 20714 KYEELFPAF True PC9_epitope_Rep2 1142.5648118428596 1142.56370993586 85.112 2 0.20082766766606813 0.0006647042066280505 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 106039 14926 SVLQQNPSL True PC9_epitope_Rep1 984.52400966004 984.52290993586 62.235 2 0.20082204340016688 0.0006647042066280505 0.9438714419765777 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 96161 8376 SEEEISFRA True H1975_Epitope_Rep2 1066.49310345458 1066.49200993586 37.171 2 0.20080681293676444 0.0006647042066280505 0.9438714419765777 ['ENSG00000162928|ENST00000295030|PEX13'] 130937 21883 VVINFDFPKL True PC9_epitope_Rep1 1190.6699456177398 1190.6688499358602 88.985 2 0.2008060744965117 0.0006647042066280505 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 29219 15965 FVDDYTVRV True PC9_epitope_Rep2 1112.55022440788 1112.54912993586 66.663 2 0.20080297317792115 0.0006647042066280505 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 106977 17042 SYLENVDHF True PC9_epitope_Rep2 1122.49818883502 1122.49708993586 70.803 2 0.2007956030470502 0.0006647042066280505 0.9438714419765777 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-5|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF'] 115030 5051 TTNDIVISK True NCI_RA007_Epitope_Rep3 989.53932537101 989.53822993586 26.864 2 0.20079544144388722 0.0006647042066280505 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 64074 18572 LQDVPLSSV True PC9_epitope_Rep5 956.51786165044 956.51676993586 76.461 2 0.20079088788330865 0.0006647042066280505 0.9438714419765777 ['ENST00000524576.5_1_11:66203480-66233392:-|nuORF', 'nc|ENSG00000174547|Q9Y3B7-2|MRPL11', 'nc|ENSG00000174547|Q9Y3B7-3|MRPL11', 'ENSG00000174547|ENST00000310999|MRPL11'] 54216 16558 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 70.451 2 0.20079011888629753 0.0006647042066280505 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 29323 10495 FVDPYPVNKY True H1975_Epitope_Rep1 1240.6128246644398 1240.61172993586 45.323 2 0.2007900520770438 0.0006647042066280505 0.9438714419765777 ['ENSG00000174010|ENST00000328046|KLHL15'] 34375 13407 GPSVFLFPPK True H1975_Epitope_Rep2 1087.6066170851898 1087.6055299358602 56.705 2 0.200786337622643 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 14192 5365 DSTANEVEAVK True H1975_Epitope_Rep3 1161.5513466066898 1161.5502499358602 25.701 2 0.2007779531949272 0.0006647042066280505 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 136909 13906 YKDGTELEL True PC9_epitope_Rep3 1066.51825557326 1066.51714993586 58.571 2 0.20077285282692808 0.0006647042066280505 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 22256 9252 ETDPQTISAY True H1975_Epitope_Rep2 1123.50333378511 1123.5022299358602 40.544 2 0.2007698146209453 0.0006647042066280505 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 13406 8450 DNLAEDIM[Oxidation]R True NCI_RA007_Epitope_Rep2 1091.49172393603 1091.4906299358602 37.511 2 0.20076740282016944 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 106154 17282 SVPDPELIKTV True PC9_epitope_Rep5 1196.66525416012 1196.66414993586 71.483 2 0.2007613924860756 0.0006647042066280505 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 40352 8035 HRTDSEIAL True PC9_epitope_Rep5 1040.5250722892 1040.5239699358601 35.844 2 0.2007582764305236 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 29184 7748 FVAEPDNKNVY True H1975_Epitope_Rep3 1294.61936659686 1294.61826993586 34.785 2 0.20075609927626042 0.0006647042066280505 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 53761 12665 KYFDEHYEY True PC9_epitope_Rep5 1292.53496826656 1292.53333490379 53.72 3 0.20075426727651277 0.0006647042066280505 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 115428 20225 TVFDEAIRAV True PC9_epitope_Rep3 1119.59242357303 1119.5913299358601 83.055 2 0.200752388949793 0.0006647042066280505 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 53916 5149 KYIHSANVL True NCI_RA007_Epitope_Rep5 1043.57637958607 1043.5752899358602 26.5 2 0.2007488348607926 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 11730 8050 DHHENKYLL True PC9_epitope_Rep1 1167.56727145435 1167.56563490379 35.786 3 0.20073754399804813 0.0006647042066280505 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 95447 21215 SALPDIKVLTL True PC9_epitope_Rep3 1168.7067250492798 1168.70562993586 86.892 2 0.2007367230100186 0.0006647042066280505 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 123109 18425 VHAYIISSL True PC9_epitope_Rep5 1001.55458151233 1001.55348993586 75.892 2 0.2007337654150665 0.0006647042066280505 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 102942 19859 SQINKFLYL True PC9_epitope_Rep2 1124.62299542532 1124.62188993586 81.779 2 0.2007330594073736 0.0006647042066280505 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 125140 13366 VLPSITTEILK True H1975_Epitope_Rep1 1212.73293979712 1212.73184993586 56.523 2 0.2007319449589451 0.0006647042066280505 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 31221 11253 GDLGIEIPAEK True NCI_RA007_Epitope_Rep1 1140.60265390356 1140.60154993586 47.766 2 0.20073098809772785 0.0006647042066280505 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 77234 19912 NYIGLINRI True PC9_epitope_Rep3 1074.61857875122 1074.61748993586 81.832 2 0.20072591205663076 0.0006647042066280505 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 116796 21569 TYLPTSPLL True PC9_epitope_Rep1 1003.55899818643 1003.55790993586 87.786 2 0.2007239075373139 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 76462 6501 NTDDTIGDLK True H1975_Epitope_Rep2 1090.51423282198 1090.5131299358602 29.922 2 0.20071766212044512 0.0006647042066280505 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5', 'ENST00000589372.1_1_19:9939013-9939570:+|nuORF'] 133028 10909 VYVQNVVKL True NCI_RA007_Epitope_Rep4 1060.6280808057597 1060.6269899358601 48.822 2 0.20071215512293358 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 36188 21031 GVFPDNFVKL True PC9_epitope_Rep3 1134.60734536118 1134.6062499358602 86.174 2 0.20071170730383994 0.0006647042066280505 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 135260 17195 YAYDGKDYLAL True PC9_epitope_Rep6 1290.6132185872598 1290.6121299358601 78.728 2 0.20071107752731449 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 76983 5124 NVSDAVAQSTR True NCI_RA007_Epitope_Rep1 1146.5629143499002 1146.56180993586 24.014 2 0.20070556171181753 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 28099 12904 FREDQIYRI True PC9_epitope_Rep4 1238.64077074778 1238.6391149037902 57.515 3 0.20070325756361818 0.0006647042066280505 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 53416 13215 KVFNDYTAV True PC9_epitope_Rep5 1055.52876068731 1055.52766993586 55.839 2 0.2006991478140277 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 26205 8484 FHTTPNTSL True PC9_epitope_Rep2 1016.49270953176 1016.49160993586 38.0 2 0.20069473449317182 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 125000 5617 VLNTNIDGR True NCI_RA007_Epitope_Rep5 1000.53015766964 1000.52906993586 28.294 2 0.20069297527746216 0.0006647042066280505 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 84872 9382 QHQSGIVQL True PC9_epitope_Rep4 1008.5352430500798 1008.53414993586 43.697 2 0.20068944518486184 0.0006647042066280505 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 108206 8210 TEADIFHQA True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 38.366 2 0.2006857173208194 0.0006647042066280505 0.9438714419765777 ['ENSG00000147251|ENST00000276202|DOCK11'] 53965 20079 KYITQGQLLQF True PC9_epitope_Rep3 1337.73433677945 1337.7332299358602 82.485 2 0.20068548940301387 0.0006647042066280505 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 86860 17119 QRQQLLVSL True PC9_epitope_Rep5 1083.64004247179 1083.6389499358602 70.869 2 0.20068454376787528 0.0006647042066280505 0.9438714419765777 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 24378 7532 FAEHNDLQY True H1975_Epitope_Rep3 1135.4934378077498 1135.4923499358601 33.954 2 0.20067269778147348 0.0006647042066280505 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 75719 8540 NQWDGTQHGV True PC9_epitope_Rep1 1140.49483479008 1140.49372993586 37.687 2 0.20067169061948875 0.0006647042066280505 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 139059 17722 YSLDHISSL True PC9_epitope_Rep3 1033.5080252427301 1033.5069299358602 73.364 2 0.20066984091137385 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 52758 11729 KQMEQVAQFL True NCI_RA007_Epitope_Rep4 1220.6223438023196 1220.62124993586 52.086 2 0.20066829051299664 0.0006647042066280505 0.9438714419765777 ['ENSG00000149591|ENST00000392951|TAGLN', 'ENST00000533863.1_2_11:117074025-117074655:+|nuORF'] 89267 6954 RELEDDARVIA True H1975_Epitope_Rep1 1285.6626283911698 1285.66099490379 31.789 3 0.20066169963954242 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 91631 9726 RPFEDQTSL True PC9_epitope_Rep6 1091.52473793603 1091.52364993586 47.817 2 0.20064753917146227 0.0006647042066280505 0.9438714419765777 ['ENSG00000197498|ENST00000441448|RPF2', 'ENST00000424137.2_1_20:34340744-34341539:+|nuORF'] 26087 17993 FHEGDVITL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 74.414 2 0.20064567971153408 0.0006647042066280505 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 77209 11111 NYIDKVRFL True NCI_RA007_Epitope_Rep3 1166.64479349906 1166.64313490379 50.806 3 0.20064141989698983 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 14600 19850 DVIEEYFK True PC9_epitope_Rep3 1041.50187723313 1041.5007899358602 81.588 2 0.200635013747878 0.0006647042066280505 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12'] 109567 13009 THASQIELL True PC9_epitope_Rep4 1010.5396597241798 1010.53856993586 57.934 2 0.20063239590920104 0.0006647042066280505 0.9438714419765777 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 10882 4941 DAPQDFHPDR True NCI_RA007_Epitope_Rep2 1196.52104953792 1196.51941490379 23.841 3 0.2006277002875661 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'FLNA|p.R664L|1|0.13|ENSG00000196924|chrX:154364557-154364557|C/A|missense_variant'] 2691 9548 AETEEGPDVLR True PC9_epitope_Rep5 1214.5778957076998 1214.57678993586 41.684 2 0.20062108354969058 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 61854 23458 LLLDVTPLSL True PC9_epitope_Rep2 1082.6587122277 1082.6576099358601 95.702 2 0.20062064413816788 0.0006647042066280505 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 47392 7750 IYIKHPHLF True NCI_RA007_Epitope_Rep3 1166.66004964038 1166.6584049037901 37.608 3 0.20061206320573308 0.0006647042066280505 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 87453 4408 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 22.063 2 0.20061077704653735 0.0006647042066280505 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 18063 18777 EIITIIHQV True PC9_epitope_Rep5 1064.6229954253201 1064.62188993586 77.238 2 0.20058745456539848 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 106593 15134 SVYVQLEKV True PC9_epitope_Rep1 1063.5913609438699 1063.59026993586 63.034 2 0.20058484333113463 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 124260 19405 VLDDKLVFV True PC9_epitope_Rep4 1046.60119735158 1046.60010993586 82.752 2 0.2005778255765471 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 68732 9300 LVDGYNVHY True H1975_Epitope_Rep2 1078.5083595959002 1078.5072699358602 40.73 2 0.20056720312552515 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB', 'ENST00000538021.5_2_11:72004413-72018253:-|nuORF'] 6721 14905 AQDEHLITF True PC9_epitope_Rep6 1072.5189242796 1072.5178299358602 69.323 2 0.20056265524903438 0.0006647042066280505 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 17178 8084 EHAGGEVEL True PC9_epitope_Rep1 939.42977492203 939.42866993586 35.919 2 0.20055332219423833 0.0006647042066280505 0.9438714419765777 ['ENSG00000218891|ENST00000325421|ZNF579'] 108427 6856 TEEFLDQNKA True H1975_Epitope_Rep2 1193.5564319871298 1193.55532993586 31.29 2 0.20054675147238693 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000488973.6_1_19:3574329-3578516:+|nuORF', 'nc|ENSG00000064961|Q9P0W2-2|HMG20B'] 132716 20378 VYSFGFERL True PC9_epitope_Rep3 1116.56039516876 1116.55928993586 83.635 2 0.20054230121135963 0.0006647042066280505 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 71390 9748 MIEPRTLQY True H1975_Epitope_Rep2 1149.58523001761 1149.5841299358601 42.484 2 0.20053709170343043 0.0006647042066280505 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 82148 4775 PTDSLNNDNKY True H1975_Epitope_Rep2 1279.5680592999902 1279.56696993586 23.456 2 0.2005363452414706 0.0006647042066280505 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 135471 7764 YEDATKITV True H1975_Epitope_Rep1 1038.5233409537 1038.5222499358601 34.822 2 0.20053611971398197 0.0006647042066280505 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 44592 4229 IPGSPPESM[Oxidation]GR True H1975_Epitope_Rep3 1142.53900848162 1142.5379099358602 21.385 2 0.20052878892376105 0.0006647042066280505 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 74405 18566 NIVDKFVIV True PC9_epitope_Rep6 1045.61718176889 1045.6160899358601 84.054 2 0.20052579354836916 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 26678 11409 FLDASGAKLDY True H1975_Epitope_Rep2 1198.5870038394198 1198.5859099358602 48.934 2 0.20051760686675033 0.0006647042066280505 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 133031 15855 VYVQNVVKL True PC9_epitope_Rep2 1060.6280808057597 1060.6269899358601 66.245 2 0.20051692650340178 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 54021 16127 KYLNSVQYI True PC9_epitope_Rep5 1126.60225998074 1126.60116993586 67.023 2 0.20051128655083295 0.0006647042066280505 0.9438714419765777 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 113159 19156 TQDAVPLTL True PC9_epitope_Rep4 956.51786165044 956.51676993586 81.781 2 0.200508890196178 0.0006647042066280505 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 39785 19694 HQDNNFLYL True PC9_epitope_Rep5 1162.54072235334 1162.5396299358601 80.803 2 0.20049439650198428 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 132422 15389 VYNPELDKW True PC9_epitope_Rep4 1162.5658744720197 1162.56476993586 67.127 2 0.2004926162642199 0.0006647042066280505 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 126705 8366 VPRPPDTVST True PC9_epitope_Rep5 1067.56112344475 1067.56002993586 37.123 2 0.20049220069351245 0.0006647042066280505 0.9438714419765777 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 88380 12956 QYNPKFQTL True PC9_epitope_Rep5 1137.58185888933 1137.5807699358602 54.845 2 0.20049052965291442 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 26767 12076 FLDPRPLTV True H1975_Epitope_Rep1 1056.59678067748 1056.59568993586 51.463 2 0.2004901662310539 0.0006647042066280505 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 5076 19763 ALLPHLYTL True PC9_epitope_Rep4 1039.60661708519 1039.6055299358602 84.142 2 0.20048800847505782 0.0006647042066280505 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 87464 11848 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep1 1318.5751192068199 1318.5740299358602 50.572 2 0.2004870306504273 0.0006647042066280505 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 109983 14763 THSNTIVVSL True PC9_epitope_Rep3 1069.57677350889 1069.57566993586 61.922 2 0.2004778979974898 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 89479 7064 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 32.101 2 0.2004761689643449 0.0006647042066280505 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 63284 7836 LPASNLAGKEA True PC9_epitope_Rep3 1069.57677350889 1069.57566993586 35.13 2 0.20047067187035508 0.0006647042066280505 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 88349 20451 QYMELFNKI True PC9_epitope_Rep1 1184.5899810448798 1184.5888899358602 83.474 2 0.2004685408130737 0.0006647042066280505 0.9438714419765777 ['ENSG00000124641|ENST00000265350|MED20'] 96329 4426 SEEYPNKPP True H1975_Epitope_Rep3 1059.48728979815 1059.48618993586 22.146 2 0.20046392230362114 0.0006647042066280505 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B'] 54827 12276 LAFNGDLAKA True PC9_epitope_Rep6 1018.5447451046199 1018.54364993586 58.604 2 0.20046310578983126 0.0006647042066280505 0.9438714419765777 ['TNKS1BP1|p.S1554Vfs*72|1|0.21|ENSG00000149115|chr11:57302483-57302483|G/-|frameshift_variant', 'ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000528882.5_1_11:57067274-57087552:-|nuORF'] 32656 9811 GHLEKAVVL True PC9_epitope_Rep5 964.5705659296399 964.56946993586 42.705 2 0.20045886560849116 0.0006647042066280505 0.9438714419765777 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'ENSG00000134107|ENST00000256495|BHLHE40', 'ENSG00000123095|ENST00000242728|BHLHE41'] 132950 20809 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep4 1230.58422733854 1230.5831299358601 88.192 2 0.20045854437624233 0.0006647042066280505 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 4440 21999 AIWKELISL True PC9_epitope_Rep1 1071.63283183303 1071.6317299358602 89.441 2 0.20045675718186293 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 113202 7754 TQDPTVTRL True PC9_epitope_Rep4 1029.5454733806098 1029.54436993586 37.218 2 0.20044524181646275 0.0006647042066280505 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 40109 9408 HRDGEFQEL True PC9_epitope_Rep5 1129.51523588149 1129.5141299358602 41.143 2 0.20044153783062207 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000136146|Q9NPJ6-2|MED4', 'ENSG00000136146|ENST00000258648|MED4'] 17245 17250 EHALLAYTL True PC9_epitope_Rep6 1029.5494961318898 1029.54838993586 78.951 2 0.20042277706065095 0.0006647042066280505 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 91302 19903 RLYPWGVVEV True PC9_epitope_Rep4 1216.6604435631998 1216.65934993586 84.691 2 0.20042255887808136 0.0006647042066280505 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 89712 12049 REYQDLLNV True NCI_RA007_Epitope_Rep1 1148.5825871653199 1148.5814899358602 50.856 2 0.2004222182759175 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 60741 5630 LKDDEVAQLK True NCI_RA007_Epitope_Rep1 1157.62920300457 1157.6275649037902 25.963 3 0.20041566317697007 0.0006647042066280505 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 26012 11523 FHDESTQVQL True PC9_epitope_Rep2 1202.5567663402999 1202.5556699358601 49.651 2 0.20041292205407174 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 74068 14477 NHTIYINNL True PC9_epitope_Rep5 1100.5614577979202 1100.56036993586 60.686 2 0.20040230937428682 0.0006647042066280505 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 85345 9506 QLDHVNVYY True H1975_Epitope_Rep1 1149.54547338061 1149.54436993586 41.485 2 0.2003974902351441 0.0006647042066280505 0.9438714419765777 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 51933 7973 KKTEVVITL True NCI_RA007_Epitope_Rep4 1029.6433965167298 1029.6422899358602 37.422 2 0.2003968281452443 0.0006647042066280505 0.9438714419765777 ['ENSG00000183735|ENST00000331710|TBK1'] 31158 11227 GDEELDSLIK True NCI_RA007_Epitope_Rep5 1117.5502839775297 1117.54918993586 49.822 2 0.20038439196348998 0.0006647042066280505 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 103907 14239 SRMDGEGQLTL True PC9_epitope_Rep3 1205.5710365054497 1205.56992993586 59.855 2 0.2003539667916428 0.0006647042066280505 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 13809 10348 DQVANSAFVER True PC9_epitope_Rep1 1234.59421447818 1234.5931099358602 44.685 2 0.20035389259221972 0.0006647042066280505 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 136481 16854 YHIDVGTQTF True PC9_epitope_Rep2 1179.5560380643099 1179.5549499358601 70.077 2 0.20035374775113135 0.0006647042066280505 0.9438714419765777 ['ENSG00000118496|ENST00000237281|FBXO30'] 47738 11863 IYQKAFEHL True PC9_epitope_Rep5 1147.6025943339098 1147.60093490379 50.63 3 0.20035219279302813 0.0006647042066280505 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 14983 20947 DYSSILQKF True PC9_epitope_Rep5 1099.55497543515 1099.5538699358601 85.63 2 0.20034966644059063 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 135924 11483 YEVKELYVP True NCI_RA007_Epitope_Rep5 1138.5910265906998 1138.58992993586 50.817 2 0.2003486065142802 0.0006647042066280505 0.9438714419765777 ['ENSG00000138801|ENST00000265174|PAPSS1'] 113750 20124 TRDPLVIEL True PC9_epitope_Rep1 1054.60225998074 1054.60116993586 82.237 2 0.20034429710786228 0.0006647042066280505 0.9438714419765777 ['ENSG00000134285|ENST00000550765|FKBP11', 'ENST00000551694.5_1_12:49318004-49319277:-|nuORF', 'nc|ENSG00000134285|Q9NYL4-2|FKBP11', 'ENST00000553027.1_1_12:49318338-49318461:-|nuORF', 'ENST00000546671.5_1_12:49317517-49318461:-|nuORF'] 41585 9220 IDEPLEGSEDR True PC9_epitope_Rep3 1258.56772494682 1258.5666299358602 40.404 2 0.20034340406370862 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 136380 15658 YHDINVYSL True PC9_epitope_Rep6 1122.53457434374 1122.53346993586 72.434 2 0.20033785335086204 0.0006647042066280505 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 70111 21153 LYIVEPLKF True PC9_epitope_Rep5 1120.6532329244399 1120.65212993586 86.418 2 0.20033754476804208 0.0006647042066280505 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 30422 10822 GAFVHFHGV True PC9_epitope_Rep4 969.4820852784097 969.48098993586 49.388 2 0.20033351110998923 0.0006647042066280505 0.9438714419765777 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 94897 12933 RYPDNLKHLYL True PC9_epitope_Rep4 1430.76703389006 1430.7653849037902 57.632 3 0.20033228011875232 0.0006647042066280505 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59'] 47377 20301 IYIDRFEDL True PC9_epitope_Rep1 1182.5920892198599 1182.59098993586 82.916 2 0.2003289900968483 0.0006647042066280505 0.9438714419765777 ['ENSG00000152219|ENST00000282032|ARL14EP'] 68833 13362 LVDTFLEDVK True NCI_RA007_Epitope_Rep1 1177.6230549949698 1177.6219499358601 55.979 2 0.20032712593899768 0.0006647042066280505 0.9438714419765777 ['CON__P34955'] 104891 4739 STFDTQITKK True NCI_RA007_Epitope_Rep4 1167.6135529404298 1167.61244993586 24.662 2 0.20032476037682348 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 109639 11401 THDLEGPPL True PC9_epitope_Rep2 977.4818104948899 977.48070993586 49.176 2 0.20031956817472213 0.0006647042066280505 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 114139 4651 TRSITNTTV True PC9_epitope_Rep6 991.52982331647 991.52872993586 25.21 2 0.2003056610263237 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 43286 15475 IHDNGEFYL True PC9_epitope_Rep4 1106.50327421546 1106.5021699358601 67.452 2 0.20029790325757538 0.0006647042066280505 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 16635 5051 EESNYELEGK True NCI_RA007_Epitope_Rep5 1196.5197121252397 1196.51860993586 26.128 2 0.20028866418196106 0.0006647042066280505 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 52021 20341 KLFPGFEIETV True PC9_epitope_Rep4 1278.6859896047 1278.6848899358602 86.386 2 0.20028478592799479 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 29288 20750 FVDPAQITM True PC9_epitope_Rep1 1020.49501803088 1020.49392993586 84.642 2 0.20028280146663555 0.0006647042066280505 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 7482 15408 ASDYFDQLY True H1975_Epitope_Rep1 1120.47130538084 1120.47020993586 64.537 2 0.20028235326654378 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 9438 5811 AVVTQVNKV True PC9_epitope_Rep2 956.5654805492 956.56438993586 27.747 2 0.20028200282787412 0.0006647042066280505 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 18290 9363 EITALAPSTM[Oxidation]K True PC9_epitope_Rep5 1176.6060254122801 1176.6049299358601 40.969 2 0.2002818548858476 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 103007 20668 SQITPHAIIFL True PC9_epitope_Rep2 1238.7023083751799 1238.70120993586 84.936 2 0.20026522777981998 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 88345 16504 QYLRVETQF True PC9_epitope_Rep5 1182.6033226099 1182.6022299358601 68.481 2 0.20026122640707594 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 47897 20304 IYVHDLLTF True PC9_epitope_Rep4 1119.59644632431 1119.5953499358602 86.242 2 0.20025233969231718 0.0006647042066280505 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 8582 11305 AVAEEVNAILK True NCI_RA007_Epitope_Rep5 1155.6499384491499 1155.6488499358602 50.13 2 0.20025104689843032 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 139396 7232 YTEEDAASY True H1975_Epitope_Rep3 1047.40328539067 1047.4021899358602 32.789 2 0.20023854509602707 0.0006647042066280505 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 98061 16413 SHVDLVVM[Oxidation]V True PC9_epitope_Rep1 1013.52156751233 1013.52046993586 67.955 2 0.20023762613980106 0.0006647042066280505 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 93856 20658 RVFSDIIYTV True PC9_epitope_Rep5 1211.65502382959 1211.65392993586 84.514 2 0.20023469174732278 0.0006647042066280505 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 46309 5028 ITESEEVVSR True H1975_Epitope_Rep1 1147.57208205127 1147.57098993586 24.411 2 0.20022971409545984 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 9762 18601 AYLEAIHNF True PC9_epitope_Rep3 1076.52909504048 1076.5279899358602 76.771 2 0.20022938607437465 0.0006647042066280505 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 138865 5822 YSDMREANY True H1975_Epitope_Rep2 1147.46042342731 1147.4598749679299 27.386 1 0.20022887681974802 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 70285 19168 LYPDHFHLL True PC9_epitope_Rep5 1153.59202965021 1153.5903749037902 78.768 3 0.20022832524827688 0.0006647042066280505 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 71556 6645 MLDHQPPQY True H1975_Epitope_Rep1 1127.50697969691 1127.50588993586 30.613 2 0.2002173913414963 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 72270 14444 MSDPYMPSYY True H1975_Epitope_Rep2 1252.4780476374 1252.4769499358601 60.714 2 0.20021479518687563 0.0006647042066280505 0.9438714419765777 ['YTHDF3|p.G256Afs*15|1|0.27|ENSG00000185728|chr8:63186776-63186776|G/-|frameshift_variant', 'ENSG00000185728|ENST00000539294|YTHDF3'] 85378 8113 QLEDGRTLSDY True H1975_Epitope_Rep1 1295.59935942827 1295.5982699358601 36.151 2 0.20021474293033845 0.0006647042066280505 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000399822.2_1_9:22012279-22012411:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 132735 21480 VYSIVPQSW True PC9_epitope_Rep3 1077.54949613189 1077.54838993586 87.914 2 0.2002104480562378 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 2363 9919 AEQFKLIQA True H1975_Epitope_Rep1 1046.5760452329 1046.57494993586 43.089 2 0.20020866677906637 0.0006647042066280505 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 132733 21299 VYSIVPQSW True PC9_epitope_Rep2 1077.54949613189 1077.54838993586 87.389 2 0.20020440042599202 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 114370 16651 TSDEVNFLVY True H1975_Epitope_Rep2 1185.55536935797 1185.55426993586 69.278 2 0.2001902676777327 0.0006647042066280505 0.9438714419765777 ['TBL1Y|p.R14W|1|0.59|ENSG00000092377|chrY:7025124-7025124|C/T|missense_variant', 'ENSG00000092377|ENST00000383032|TBL1Y', 'nc|ENSG00000101849|O60907-2|TBL1X', 'ENSG00000101849|ENST00000645353|TBL1X'] 67168 11088 LTDFIREEY True H1975_Epitope_Rep1 1184.57135377528 1184.5702499358601 47.614 2 0.20018475474342692 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3'] 26529 20228 FIVEEIQRI True PC9_epitope_Rep1 1145.6444591458899 1145.6433699358602 82.636 2 0.2001832130534534 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 90710 5021 RKNQGDFSL True NCI_RA007_Epitope_Rep3 1063.5410567065098 1063.53994993586 26.745 2 0.2001786111510577 0.0006647042066280505 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF'] 138342 11083 YRAQPSVSL True PC9_epitope_Rep5 1019.5399940773499 1019.53888993586 47.619 2 0.2001635768182596 0.0006647042066280505 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 73782 19418 NHDFTPLEI True PC9_epitope_Rep3 1084.5189242796 1084.5178299358602 79.917 2 0.20015742092596406 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 91055 23500 RLLDVLAPLVL True PC9_epitope_Rep1 1220.7856440763198 1220.78454993586 95.179 2 0.20015606012285111 0.0006647042066280505 0.9438714419765777 ['ENSG00000182871|ENST00000651438|COL18A1'] 27775 10173 FQEETGVRV True PC9_epitope_Rep1 1063.52982331647 1063.5287299358602 44.007 2 0.20014313283767649 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 98949 5171 SKAEAESLYQS True H1975_Epitope_Rep2 1211.5669966708301 1211.56588993586 24.966 2 0.2001418979823104 0.0006647042066280505 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 47724 14603 IYQGRLWAF True NCI_RA007_Epitope_Rep5 1152.60801406752 1152.6069099358601 62.838 2 0.2001382957091475 0.0006647042066280505 0.9438714419765777 ['ENSG00000240247|ENST00000382689|DEFA1B', 'ENSG00000239839|ENST00000327857|DEFA3', 'ENSG00000206047|ENST00000382692|DEFA1'] 113788 15712 TRDSLPVSL True PC9_epitope_Rep1 986.53965972418 986.53856993586 65.259 2 0.2001235586766118 0.0006647042066280505 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 70150 15834 LYLDEAHSI True PC9_epitope_Rep5 1059.52367530687 1059.52256993586 65.898 2 0.20012081336984933 0.0006647042066280505 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'SPTLC2|p.A351S|1|0.2|ENSG00000100596|chr14:77555425-77555425|C/A|missense_variant'] 108708 3649 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 18.988 2 0.2001103200262676 0.0006647042066280505 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 77236 17656 NYIGLINRI True PC9_epitope_Rep6 1074.61857875122 1074.61748993586 80.553 2 0.20010374624232347 0.0006647042066280505 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 35347 8576 GSYTFDPVTK True NCI_RA007_Epitope_Rep4 1113.5342399905699 1113.5331499358601 39.772 2 0.20009869604639213 0.0006647042066280505 0.9438714419765777 ['ENSG00000185009|ENST00000355264|AP3M1'] 67280 14308 LTDPAIVKV True PC9_epitope_Rep3 954.57498260374 954.57388993586 60.122 2 0.2000968638697178 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 76036 16966 NRLDSIDPAL True PC9_epitope_Rep1 1112.5825871653199 1112.5814899358602 70.082 2 0.20009488156659955 0.0006647042066280505 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124359502-124368686:-|nuORF', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 106812 17325 SYGSVFKAI True PC9_epitope_Rep1 970.5123823471799 970.51128993586 71.454 2 0.2000923300857189 0.0006647042066280505 0.9438714419765777 ['STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion', 'ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 14268 5326 DSYVGDEAQSK True PC9_epitope_Rep3 1197.51496109797 1197.5138699358602 25.564 2 0.2000921239438384 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 72113 15269 MRDPTFVRL True PC9_epitope_Rep3 1133.60154878809 1133.59990490379 63.883 3 0.20009034849043156 0.0006647042066280505 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 17365 6843 EHDTTEYKL True PC9_epitope_Rep5 1134.51931820242 1134.51766490379 31.292 3 0.20008931063922863 0.0006647042066280505 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 49444 16684 KIQEILTQV True PC9_epitope_Rep3 1070.63356010902 1070.6324699358602 69.31 2 0.200087910571746 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000136231|O00425-2|IGF2BP3', 'PRKCA-IGF2BP3|1|fusion', 'ENSG00000136231|ENST00000258729|IGF2BP3', 'ENST00000454907.1_1_6:167114584-167114857:-|nuORF'] 47116 17751 IVWQEDPRL True PC9_epitope_Rep5 1154.6084079903396 1154.60730993586 73.298 2 0.20008362246150982 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 39937 15153 HQNQLLSSL True PC9_epitope_Rep1 1038.5458077337798 1038.54470993586 63.107 2 0.20007977878644784 0.0006647042066280505 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 98112 11992 SIAIDTIINQK True NCI_RA007_Epitope_Rep2 1214.6870522338602 1214.6859499358602 51.238 2 0.20006750369083492 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 103052 19363 SQLDVPFKV True PC9_epitope_Rep1 1031.56514619603 1031.56404993586 79.287 2 0.20006254973538745 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 38605 9044 HHINDTDTIL True PC9_epitope_Rep2 1177.57275075761 1177.57111490379 40.134 3 0.20005875017717634 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 97015 9236 SEVQYIQEA True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 40.482 2 0.20005589057569872 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 109904 5230 THNPTNATL True PC9_epitope_Rep5 967.47230844035 967.47120993586 25.132 2 0.20005497689886365 0.0006647042066280505 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 108505 6433 TEFPAKAVA True H1975_Epitope_Rep3 932.4967322830398 932.49562993586 29.721 2 0.20004532286081225 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000137203|P05549-5|TFAP2A', 'nc|ENSG00000137203|P05549-6|TFAP2A', 'nc|ENSG00000137203|P05549|TFAP2A', 'ENSG00000137203|ENST00000379613|TFAP2A'] 77407 18322 NYLVLPNRI True PC9_epitope_Rep4 1100.63422881536 1100.63312993586 78.544 2 0.2000342350910649 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 67495 7975 LTELETAVR True NCI_RA007_Epitope_Rep1 1030.56587447202 1030.56476993586 35.014 2 0.2000223103293162 0.0006647042066280505 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF'] 77324 12400 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.6069699358602 55.501 2 0.20002209512444988 0.0006647042066280505 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 16918 6125 EGDLIAAQAR True H1975_Epitope_Rep3 1042.54072235334 1042.5396299358601 28.572 2 0.20002147226711847 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 118326 7500 VDEPQNLIK True H1975_Epitope_Rep1 1054.56587447202 1054.56476993586 33.847 2 0.2000093327511165 0.0006647042066280505 0.9438714419765777 ['CON__P02769'] 132816 15018 VYTDFAFRI True NCI_RA007_Epitope_Rep4 1130.5760452328998 1130.57494993586 65.278 2 0.20000357306671218 0.0006647042066280505 0.9438714419765777 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000462798.1_1_1:6592521-6593409:-|nuORF'] 135849 5414 YEQNDRLTP True H1975_Epitope_Rep2 1134.53055159246 1134.5294499358602 25.852 2 0.19999919466653707 0.0006647042066280505 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 114163 7300 TRSTFSTNY True PC9_epitope_Rep2 1075.49343780775 1075.4923499358601 33.464 2 0.1999989263882444 0.0006647042066280505 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 106391 8753 SVSTVLTSKY True NCI_RA007_Epitope_Rep4 1083.58119018299 1083.58008993586 40.465 2 0.19998841234582637 0.0006647042066280505 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 94867 10616 RYNPENNTW True PC9_epitope_Rep5 1192.52613491836 1192.5250299358602 45.822 2 0.19998362527628866 0.0006647042066280505 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion', 'ENST00000494880.5_1_1:185268818-185270317:-|nuORF'] 75260 8219 NPNGPYPYTLK True H1975_Epitope_Rep1 1262.6295373577402 1262.62844993586 36.558 2 0.199977805347402 0.0006647042066280505 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000595804.5_1_19:39327364-39328165:-|nuORF'] 5758 8858 APEEHPVLL True H1975_Epitope_Rep3 1003.5338460677498 1003.53274993586 39.078 2 0.1999777996550298 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 45219 17182 IRKPYIWEY True PC9_epitope_Rep5 1266.67609362734 1266.6749899358601 71.112 2 0.19996599279749347 0.0006647042066280505 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 69876 16663 LYAPYSTHF True PC9_epitope_Rep5 1097.51819600361 1097.5170899358602 69.099 2 0.1999524377260684 0.0006647042066280505 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 94442 21379 RYFLPPYTF True PC9_epitope_Rep3 1202.6124307416196 1202.61132993586 87.534 2 0.19995160693411632 0.0006647042066280505 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 104735 7820 STDKFKTDFY True H1975_Epitope_Rep1 1250.58191845898 1250.58082993586 35.031 2 0.19995104568238678 0.0006647042066280505 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 83710 5735 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 27.058 1 0.19995019907133763 0.0006647042066280505 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 99997 21585 SLITLIEKV True PC9_epitope_Rep5 1014.6324974798599 1014.63140993586 88.067 2 0.19994598293160626 0.0006647042066280505 0.9438714419765777 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 1619 7023 AEFVEVTK True NCI_RA007_Epitope_Rep1 921.4807478657299 921.4801949679301 31.316 1 0.1999450917940973 0.0006647042066280505 0.9438714419765777 ['CON__P02769'] 118334 9026 VDEVGGEALGR True PC9_epitope_Rep3 1100.5462016565998 1100.5451099358602 39.661 2 0.19994343148131388 0.0006647042066280505 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'CON__P02070', 'CON__Q3SX09'] 138114 17058 YQHGIFQSI True PC9_epitope_Rep5 1091.53999407735 1091.5388899358602 70.632 2 0.1999407405655207 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1'] 70177 20950 LYLKALEGF True PC9_epitope_Rep1 1052.5906326678798 1052.5895299358601 85.406 2 0.1999214443598347 0.0006647042066280505 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 97480 19140 SGLLKVWQV True PC9_epitope_Rep4 1028.6018660579198 1028.6007699358602 81.717 2 0.19991992457420246 0.0006647042066280505 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 85437 15664 QLEWDDSTLSY True H1975_Epitope_Rep3 1355.58812603823 1355.58702993586 65.669 2 0.1999068690912376 0.0006647042066280505 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 26683 12401 FLDDFESKY True H1975_Epitope_Rep2 1162.51825557326 1162.51714993586 52.787 2 0.1999062012476198 0.0006647042066280505 0.9438714419765777 ['ENST00000494757.5_1_17:38375603-38434474:+|nuORF', 'ENSG00000171475|ENST00000323571|WIPF2', 'nc|ENSG00000171475|Q8TF74-2|WIPF2'] 27452 10236 FNPFVTSDR True NCI_RA007_Epitope_Rep5 1081.51925863277 1081.5181699358602 46.004 2 0.19990563675640788 0.0006647042066280505 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 56696 8451 LEAEIATYR True NCI_RA007_Epitope_Rep1 1064.55022440788 1064.54912993586 36.872 2 0.1999008799422798 0.0006647042066280505 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 14927 16840 DYLEVAKHF True PC9_epitope_Rep5 1120.55530978832 1120.5542099358602 69.785 2 0.1999007682393552 0.0006647042066280505 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 138287 14664 YQYPVIIHL True H1975_Epitope_Rep1 1144.6280808057597 1144.6269899358601 61.62 2 0.19989182089908333 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 105657 5164 SVFQTTDTK True NCI_RA007_Epitope_Rep4 1025.5029398622898 1025.50184993586 26.388 2 0.19989138473194037 0.0006647042066280505 0.9438714419765777 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 39973 12035 HQQSIPAVL True PC9_epitope_Rep4 991.5450794577898 991.5439899358599 54.097 2 0.19988754909781323 0.0006647042066280505 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 23629 21958 EYFSYPVSL True PC9_epitope_Rep5 1103.51752729727 1103.51642993586 89.497 2 0.19988503101768149 0.0006647042066280505 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 128193 13636 VRTPYTMSY True PC9_epitope_Rep3 1116.52738078832 1116.5262899358602 57.516 2 0.1998843656760787 0.0006647042066280505 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 132561 14321 VYPLMKEYF True NCI_RA007_Epitope_Rep4 1188.5889184157197 1188.58782993586 62.392 2 0.19988348870567485 0.0006647042066280505 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 86730 8894 QRLAEPSQL True PC9_epitope_Rep2 1040.56145779792 1040.56036993586 39.567 2 0.19988250630403626 0.0006647042066280505 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 4370 16603 AIQDKLFQV True PC9_epitope_Rep6 1060.59169529704 1060.5905899358602 76.321 2 0.19988045139550972 0.0006647042066280505 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 23880 6134 EYMKHTRLF True NCI_RA007_Epitope_Rep3 1223.6121134717898 1223.61100993586 31.117 2 0.19987993986059727 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 120513 17386 VFYPYPQYF True NCI_RA007_Epitope_Rep4 1222.5698972232997 1222.5688099358601 75.289 2 0.199876178467731 0.0006647042066280505 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 140391 17990 YYEYNHDLF True PC9_epitope_Rep2 1262.5244035828598 1262.5233099358602 74.5 2 0.19987323047698308 0.0006647042066280505 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 54205 16049 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 70.814 2 0.19986537696876167 0.0006647042066280505 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 44779 8593 IPTISTQLK True H1975_Epitope_Rep1 999.59644632431 999.59534993586 37.981 2 0.19985951492937798 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 91365 5160 RMQKEITAL True NCI_RA007_Epitope_Rep5 1088.60121443492 1088.60010993586 26.543 2 0.19985909415498382 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 87088 12654 QSELVGQLY True H1975_Epitope_Rep2 1035.52367530687 1035.52317496793 53.771 1 0.19985879946045518 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 4152 12458 AHWQFETAL True NCI_RA007_Epitope_Rep3 1101.5243440132099 1101.5232499358601 56.223 2 0.19985776891034548 0.0006647042066280505 0.9438714419765777 ['ENSG00000185262|ENST00000327490|UBALD2', 'ENSG00000153443|ENST00000283474|UBALD1'] 73767 14067 NHASLISAL True PC9_epitope_Rep4 924.50288029264 924.50178993586 62.019 2 0.1998560087475045 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 108367 8938 TEDPNQLTV True H1975_Epitope_Rep2 1015.4822044177099 1015.4816749679301 39.339 1 0.19985151276063684 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2', 'NFE2L2|p.S270L|1|0.31|ENSG00000116044|chr2:177231794-177231794|G/A|missense_variant'] 123091 19153 VHAPPMQLGF True PC9_epitope_Rep3 1095.5535359665098 1095.5524299358601 78.894 2 0.19985031094196318 0.0006647042066280505 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 130608 16098 VVAELLRTV True PC9_epitope_Rep6 998.61243074162 998.61132993586 74.256 2 0.19984777164134604 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 81755 14370 PSDLTVGQFY True H1975_Epitope_Rep2 1125.5342399905699 1125.53367496793 60.424 1 0.19983774671742874 0.0006647042066280505 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 53704 20575 KYDEIFYNL True PC9_epitope_Rep5 1203.5811901829898 1203.58008993586 84.189 2 0.19983473195564022 0.0006647042066280505 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 119876 10553 VEVTEFEDIK True NCI_RA007_Epitope_Rep3 1207.59723416995 1207.59612993586 48.565 2 0.19983406328862996 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 14684 8555 DVNQQEFVR True PC9_epitope_Rep4 1133.5465360097699 1133.54542993586 40.385 2 0.19983361563593838 0.0006647042066280505 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 89586 4357 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 23.104 2 0.19982804514399674 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 7668 5039 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep3 990.4618036426001 990.46070993586 24.471 2 0.1998214851042238 0.0006647042066280505 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 29180 19162 FVADEELVHL True PC9_epitope_Rep4 1170.5920892198599 1170.59098993586 81.804 2 0.19981695933183324 0.0006647042066280505 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51', 'ENST00000530673.1_2_11:64878667-64879056:+|nuORF', 'ENST00000533827.5_1_11:64876997-64879056:+|nuORF'] 6885 16205 AQIKEMVEL True PC9_epitope_Rep3 1059.56343194387 1059.5623299358601 67.47 2 0.19981586378882116 0.0006647042066280505 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 94081 17913 RVVDYLTKL True PC9_epitope_Rep5 1105.64954452633 1105.64844993586 73.92 2 0.19981097671974776 0.0006647042066280505 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 114291 8445 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.58478993586 39.3 2 0.19981082034514636 0.0006647042066280505 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 22984 17891 EVIKELAQI True PC9_epitope_Rep5 1041.6070110080097 1041.6059099358602 73.836 2 0.19980757739079255 0.0006647042066280505 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 115253 6752 TVDGPSGKLWR True NCI_RA007_Epitope_Rep5 1214.64077074778 1214.6391149037902 32.647 3 0.19979804342300983 0.0006647042066280505 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 31567 10202 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51676993586 44.182 2 0.19979216793125587 0.0006647042066280505 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 87811 8601 QVIGVVLQK True NCI_RA007_Epitope_Rep5 982.6175161220598 982.61640993586 39.761 2 0.19978737420429135 0.0006647042066280505 0.9438714419765777 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 96457 11263 SEIPKLPAV True NCI_RA007_Epitope_Rep5 952.5593325395998 952.55822993586 49.967 2 0.19977120530416345 0.0006647042066280505 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 90352 9150 RIIEETLALK True NCI_RA007_Epitope_Rep4 1184.71287305888 1184.71176993586 42.036 2 0.1997680620042712 0.0006647042066280505 0.9438714419765777 ['ENSG00000163466|ENST00000315717|ARPC2', 'ENST00000489598.5_1_2:219082193-219099125:+|nuORF', 'ENST00000491780.5_1_2:219082193-219100082:+|nuORF', 'ENST00000465395.5_1_2:219082193-219103574:+|nuORF'] 43322 9331 IHEPEPHIL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 46.074 2 0.1997667456114047 0.0006647042066280505 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 107319 11028 SYREDPIVY True PC9_epitope_Rep6 1140.5451390274397 1140.5440499358601 53.323 2 0.19975919201838194 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 28947 8839 FTEQYNEQY True H1975_Epitope_Rep1 1220.4985827578398 1220.49807496793 38.923 1 0.19975892620146654 0.0006647042066280505 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 89747 5579 REYQVKLQA True NCI_RA007_Epitope_Rep5 1133.61930702721 1133.61766490379 28.146 3 0.19975535970491567 0.0006647042066280505 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 114924 11809 TTEVVNELY True H1975_Epitope_Rep2 1066.51825557326 1066.51767496793 50.499 1 0.19975042637672935 0.0006647042066280505 0.9438714419765777 ['ENSG00000113719|ENST00000393784|ERGIC1', 'ERGIC1-RANBP17|1|fusion', 'ERGIC1-RANBP17|2|fusion'] 42021 9447 IEDTRYTLP True H1975_Epitope_Rep2 1106.56078909158 1106.5596899358602 41.305 2 0.19974263793118252 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant'] 53797 13493 KYFLWEEKF True NCI_RA007_Epitope_Rep1 1288.6492101731599 1288.64810993586 56.489 2 0.19973760549116215 0.0006647042066280505 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 95389 6083 SAINEVVTR True NCI_RA007_Epitope_Rep5 987.53490869691 987.53380993586 30.08 2 0.19973701981608 0.0006647042066280505 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 2503 9634 AEQQALRLEV True H1975_Epitope_Rep1 1155.6247863304698 1155.62368993586 41.985 2 0.19972948279080793 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 85155 21031 QIYDIFQKL True PC9_epitope_Rep2 1166.6335601090198 1166.6324699358602 86.348 2 0.1997277316388782 0.0006647042066280505 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 29604 21125 FVLDKVPFL True PC9_epitope_Rep4 1076.6270181766 1076.62592993586 89.42 2 0.19972319773230637 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 132327 22812 VYLPPEAFTF True PC9_epitope_Rep3 1182.5961119711399 1182.5950099358602 93.017 2 0.19971294926659053 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 8414 7069 ATQSFSTFR True NCI_RA007_Epitope_Rep4 1043.50360856863 1043.5025099358602 33.815 2 0.19970872906434772 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7'] 42192 6274 IEGEGSVLQAK True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 29.14 2 0.19969554784302723 0.0006647042066280505 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 10024 17214 AYTPFHAVL True PC9_epitope_Rep4 1017.5283667644899 1017.52726993586 74.222 2 0.19969159299402867 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 106110 2981 SVNGKVLSK True NCI_RA007_Epitope_Rep4 930.5498304850599 930.54872993586 16.687 2 0.1996903940102282 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 69850 13477 LYANMFERL True NCI_RA007_Epitope_Rep3 1155.57466533391 1155.5735699358602 60.301 2 0.19968992649113984 0.0006647042066280505 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 14272 4488 DSYVGDEAQSK True PC9_epitope_Rep4 1197.51496109797 1197.5138699358602 23.734 2 0.19968858375923285 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 67340 8418 LTDRELEEY True H1975_Epitope_Rep2 1166.54553295026 1166.54442993586 37.333 2 0.199687981356952 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 135397 7909 YDNEFGYSNR True NCI_RA007_Epitope_Rep1 1263.5156298043098 1263.51452993586 34.758 2 0.19967915728093386 0.0006647042066280505 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'chr12:6537216-6538101|251|78.77|0.54|7.19|+|1|GAPDH,GAPDH|1'] 21473 5642 ERQPGAASL True PC9_epitope_Rep1 927.4773938207899 927.47628993586 26.527 2 0.19967309393669125 0.0006647042066280505 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 76307 11290 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.4967499358602 48.474 2 0.19966147917525826 0.0006647042066280505 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 2452 5743 AEQMASVQNA True H1975_Epitope_Rep3 1047.46550880775 1047.4644099358602 27.116 2 0.19966106717996018 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 107537 11009 TADHNLLLY True H1975_Epitope_Rep3 1058.53965972418 1058.53856993586 47.435 2 0.19965567804479276 0.0006647042066280505 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 37553 15111 GYPLWKVTF True NCI_RA007_Epitope_Rep3 1109.59096702105 1109.5898699358602 66.937 2 0.19965431234375267 0.0006647042066280505 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 132019 13616 VYGSFASKL True PC9_epitope_Rep2 970.5123823471799 970.51128993586 57.665 2 0.19965122331456328 0.0006647042066280505 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 124342 13233 VLDRLTFDY True H1975_Epitope_Rep2 1140.58152453616 1140.5804299358601 56.029 2 0.19964327363097412 0.0006647042066280505 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000338427.10_1_7:44425612-44442312:-|nuORF'] 2401 8924 AEQKSNYFEV True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 39.288 2 0.19963833280906682 0.0006647042066280505 0.9438714419765777 ['ENSG00000163840|ENST00000296161|DTX3L', 'DTX3L|p.R260Ifs*6|1|0.13|ENSG00000163840|chr3:122568867-122568868|AG/-|frameshift_variant'] 107116 12045 SYM[Oxidation]GHFDLL True NCI_RA007_Epitope_Rep3 1097.48518200361 1097.48408993586 54.501 2 0.1996294321635161 0.0006647042066280505 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 47892 15129 IYVHDLLTF True NCI_RA007_Epitope_Rep3 1119.59644632431 1119.5953499358602 67.012 2 0.1996247042312365 0.0006647042066280505 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 17773 19930 EHVFWVVSL True PC9_epitope_Rep6 1114.5811306133398 1114.58002993586 89.32 2 0.19962276578771596 0.0006647042066280505 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 70043 18182 LYGRNFNYL True PC9_epitope_Rep1 1158.5821932425 1158.58108993586 74.727 2 0.19961398304499559 0.0006647042066280505 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 71948 19110 MPTLPPPSV True PC9_epitope_Rep5 937.49428975489 937.49318993586 78.539 2 0.19961330231995666 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 95912 10160 SDVEAIFSK True NCI_RA007_Epitope_Rep2 994.49712620586 994.4965749679301 44.108 1 0.19961146119839987 0.0006647042066280505 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 43310 11793 IHEPEPHIL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 50.377 2 0.1996037687932422 0.0006647042066280505 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 139448 6437 YTETEPYHNY True H1975_Epitope_Rep1 1315.5356965425499 1315.5351749679298 29.82 1 0.19960161861719772 0.0006647042066280505 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 2277 19046 AEPLEIILHLP True H1975_Epitope_Rep2 1243.71762408615 1243.71652993586 79.065 2 0.19960131623725624 0.0006647042066280505 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 52696 15441 KQIETGPFL True PC9_epitope_Rep5 1031.5651461960297 1031.56404993586 64.403 2 0.19959658746921013 0.0006647042066280505 0.9438714419765777 ['ENSG00000139433|ENST00000318348|GLTP'] 125398 9134 VLTEIIASR True H1975_Epitope_Rep1 1000.5916952970399 1000.59058993586 40.04 2 0.19959204640220882 0.0006647042066280505 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 52139 21590 KLVEFDFLGA True PC9_epitope_Rep5 1137.60701100801 1137.6059099358602 88.086 2 0.19958506505359336 0.0006647042066280505 0.9438714419765777 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|9|fusion', 'ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 22221 10048 ETDKNGFLQY True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 43.641 2 0.1995819829054996 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 29446 21424 FVHDLVLYL True PC9_epitope_Rep2 1117.6171817688898 1117.6160899358601 87.88 2 0.19957879516326502 0.0006647042066280505 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 47203 15550 IYAPKLQEF True PC9_epitope_Rep6 1107.59644632431 1107.5953499358602 72.013 2 0.19957302294899468 0.0006647042066280505 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 25380 10714 FEIGGTIHP True H1975_Epitope_Rep3 969.49198125577 969.49088993586 46.288 2 0.19956893734171552 0.0006647042066280505 0.9438714419765777 ['ENSG00000138678|ENST00000264409|GPAT3'] 76202 17793 NRVPAGNWVL True PC9_epitope_Rep5 1124.60907669668 1124.6079699358602 73.458 2 0.1995681691260241 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000590367.5_1_17:42931463-42950195:-|nuORF', 'ENST00000586276.5_1_17:42937766-42940268:-|nuORF'] 135650 9099 YEFGESDLR True H1975_Epitope_Rep1 1114.4931034545798 1114.49200993586 39.903 2 0.19955654474941725 0.0006647042066280505 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 90154 17610 RHDDYLVML True PC9_epitope_Rep2 1160.5648289262 1160.56318490379 73.014 3 0.1995496261833685 0.0006647042066280505 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 54152 19470 KYNDNFFGL True PC9_epitope_Rep4 1116.5240096600398 1116.52290993586 83.007 2 0.19954775414640227 0.0006647042066280505 0.9438714419765777 ['ENSG00000012963|ENST00000013070|UBR7'] 70394 23032 LYQFNPAFF True PC9_epitope_Rep1 1145.5545815123298 1145.5534899358602 93.392 2 0.19953878599606764 0.0006647042066280505 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 136445 12341 YHGEVPVSL True PC9_epitope_Rep6 999.5025459394699 999.50144993586 58.871 2 0.19953800446571782 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 21156 14584 ERDVSLTSL True PC9_epitope_Rep3 1018.5294889633 1018.52838993586 61.225 2 0.19952506686913854 0.0006647042066280505 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 133243 9579 WEEETVPTT True H1975_Epitope_Rep2 1090.4818700645399 1090.48076993586 41.82 2 0.1995198701655227 0.0006647042066280505 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 116669 14864 TYIPVPAKI True PC9_epitope_Rep6 1000.5957180483199 1000.59462993586 69.151 2 0.19951782037945398 0.0006647042066280505 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 108707 3571 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 18.637 2 0.19951296000601043 0.0006647042066280505 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 77097 12771 NYAFLHRTL True PC9_epitope_Rep2 1133.59817765981 1133.59654490379 54.428 3 0.1995105221101304 0.0006647042066280505 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 6593 19270 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 78.924 2 0.19949857193308287 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 115139 5922 TVADHIQKV True PC9_epitope_Rep3 1009.5556441414899 1009.55454993586 27.84 2 0.19948906085251508 0.0006647042066280505 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 106596 13687 SVYVQLEKV True PC9_epitope_Rep4 1063.5913609438699 1063.59026993586 60.537 2 0.19947863596961027 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 56625 5280 LDYQESPPGK True H1975_Epitope_Rep3 1132.540053647 1132.53894993586 25.392 2 0.1994780452196499 0.0006647042066280505 0.9438714419765777 ['CON__Q3T052'] 37945 5726 HEEM[Oxidation]NYITA True H1975_Epitope_Rep3 1122.46517483502 1122.4640699358602 27.054 2 0.19947464994134845 0.0006647042066280505 0.9438714419765777 ['ENST00000524546.5_1_8:42911603-42924800:+|nuORF', 'FNTA|p.Y166Sfs*6|1|0.25|ENSG00000168522|chr8:43069649-43069650|TA/-|frameshift_variant', 'ENST00000526755.5_1_8:42911676-42932640:+|nuORF', 'nc|ENSG00000168522|P49354-2|FNTA', 'ENSG00000168522|ENST00000302279|FNTA'] 49032 11410 KFIDTTSKF True PC9_epitope_Rep5 1085.57571087973 1085.57460993586 48.888 2 0.19947377212241302 0.0006647042066280505 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 22797 6941 EVDPNIQAVR True H1975_Epitope_Rep3 1139.5934862021898 1139.5923899358602 31.66 2 0.19946801833086097 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 27724 14617 FQDPYTRSL True PC9_epitope_Rep1 1125.54547338061 1125.54436993586 61.047 2 0.19946490956697224 0.0006647042066280505 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 109656 6802 THDQAVQAL True PC9_epitope_Rep5 981.4879585044899 981.48686993586 31.135 2 0.19945759126589505 0.0006647042066280505 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 44976 10791 IQHSEFEEV True PC9_epitope_Rep5 1116.50875351872 1116.5076499358602 46.497 2 0.1994548763450077 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1', 'ENSG00000108175|ENST00000334512|ZMIZ1'] 60165 12769 LHYPSTTAL True PC9_epitope_Rep2 1001.51819600361 1001.51708993586 54.421 2 0.19945228856679034 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 2812 5707 AEVETRIEA True H1975_Epitope_Rep3 1016.5138388991599 1016.51274993586 26.981 2 0.19943939641500733 0.0006647042066280505 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 54156 19422 KYNDTFWKEF True PC9_epitope_Rep5 1376.6401020414398 1376.63845490379 79.755 3 0.19943804942434643 0.0006647042066280505 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 102965 7772 SQIQEFKEA True PC9_epitope_Rep2 1078.5294889632999 1078.52838993586 35.268 2 0.1994278630888963 0.0006647042066280505 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 40126 13663 HRDSGILGL True PC9_epitope_Rep1 966.5246783663799 966.52358993586 57.41 2 0.19942403978162657 0.0006647042066280505 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 120104 13089 VFIDKQTNL True PC9_epitope_Rep3 1076.5866099166 1076.58550993586 55.37 2 0.19942347872453497 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 40125 13574 HRDSGILGL True PC9_epitope_Rep1 966.5246783663799 966.52358993586 57.068 2 0.19941941545281758 0.0006647042066280505 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 87045 7158 QSDPTQSGMY True H1975_Epitope_Rep2 1112.44443901 1112.4433499358602 32.467 2 0.1994150451392073 0.0006647042066280505 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 91487 5375 RNVSTGDVNVE True NCI_RA007_Epitope_Rep1 1188.5734790335998 1188.5723899358602 24.987 2 0.19941236253905467 0.0006647042066280505 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 98946 12564 SIYYITGESK True PC9_epitope_Rep1 1159.57610480255 1159.5750099358602 53.196 2 0.19940610027068187 0.0006647042066280505 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 107109 20646 SYMGHFDLL True PC9_epitope_Rep3 1081.49026700361 1081.4891699358602 84.686 2 0.19939177836274002 0.0006647042066280505 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 67354 6947 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 31.641 2 0.19938530017654482 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 132456 14682 VYNSEYYHF True PC9_epitope_Rep4 1220.5138388991602 1220.51274993586 64.409 2 0.19938435716539463 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 133008 10073 VYVQHPITF True NCI_RA007_Epitope_Rep3 1102.5811306133398 1102.58002993586 46.715 2 0.19937240874731244 0.0006647042066280505 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 65315 10610 LSELEAALQR True NCI_RA007_Epitope_Rep2 1128.6138872935999 1128.61278993586 45.869 2 0.1993640825725402 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 41255 7378 IAEVDASVVR True H1975_Epitope_Rep3 1057.5767735088898 1057.57566993586 33.357 2 0.1993626604990447 0.0006647042066280505 0.9438714419765777 ['ENST00000415995.5_1_3:48636563-48647036:-|nuORF', 'ENSG00000010256|ENST00000203407|UQCRC1', 'ENST00000480561.5_1_3:48636882-48638270:-|nuORF', 'ENST00000471189.5_1_3:48636563-48638429:-|nuORF'] 77435 15471 NYNEKIYEL True PC9_epitope_Rep5 1184.5713537752797 1184.5702499358601 64.52 2 0.1993587378216524 0.0006647042066280505 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 9763 16933 AYLEAIHNF True PC9_epitope_Rep4 1076.52909504048 1076.5279899358602 73.119 2 0.19935682688099915 0.0006647042066280505 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 21364 15134 ERLQIDEQL True PC9_epitope_Rep5 1142.5931518490197 1142.5920499358601 63.218 2 0.19935467117424432 0.0006647042066280505 0.9438714419765777 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF', 'ENST00000492846.1_1_X:147022154-147024854:+|nuORF', 'TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1'] 14681 8996 DVNQQEFVR True PC9_epitope_Rep2 1133.5465360097699 1133.54542993586 39.955 2 0.19935285853050397 0.0006647042066280505 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 14248 4482 DSYVGDEAQSK True NCI_RA007_Epitope_Rep2 1197.51496109797 1197.5138699358602 22.066 2 0.19934444586720532 0.0006647042066280505 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 27316 13349 FM[Oxidation]DPASALY True H1975_Epitope_Rep2 1029.44773386573 1029.44662993586 56.479 2 0.19934371567283973 0.0006647042066280505 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 87329 19514 QTAPEEAFIKL True PC9_epitope_Rep1 1245.6605031328497 1245.6594099358601 79.88 2 0.1993342455750718 0.0006647042066280505 0.9438714419765777 ['TTC30B|p.A478Cfs*6|1|0.11|ENSG00000196659|chr2:177551332-177551333|-/A|frameshift_variant', 'TTC30A|p.A478Cfs*6|1|0.12|ENSG00000197557|chr2:177617270-177617271|-/A|frameshift_variant', 'ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 140608 11716 YYMIGEQKF True NCI_RA007_Epitope_Rep5 1177.5477818797299 1177.54668993586 51.72 2 0.19932650190698403 0.0006647042066280505 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT'] 138431 19208 YRDWFSSQL True PC9_epitope_Rep4 1200.55637241748 1200.55526993586 81.983 2 0.19931741497840996 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2', 'ENST00000522359.2_1_11:61630757-61632750:+|nuORF'] 138122 14951 YQITQINHGL True PC9_epitope_Rep5 1185.61422164677 1185.6131299358601 62.511 2 0.19931362876348913 0.0006647042066280505 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 70985 14806 M[Oxidation]EQISQFLQAA True H1975_Epitope_Rep3 1280.60708804144 1280.6059899358602 62.331 2 0.19930402118334234 0.0006647042066280505 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 132027 12233 VYGSFASKL True PC9_epitope_Rep6 970.5123823471799 970.51128993586 58.429 2 0.19930172356194725 0.0006647042066280505 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 46229 8858 ITDSAGHILY True H1975_Epitope_Rep1 1088.55022440788 1088.54912993586 38.993 2 0.1992841716163122 0.0006647042066280505 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 137658 14289 YLYPDITRL True H1975_Epitope_Rep2 1152.6179100448799 1152.6168099358601 60.112 2 0.19928323705997747 0.0006647042066280505 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 83750 12216 QEDKPSPLLF True H1975_Epitope_Rep2 1172.607739284 1172.60664993586 52.071 2 0.19928246603975275 0.0006647042066280505 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1'] 72247 18902 MRYVASYLL True PC9_epitope_Rep4 1114.5845017416198 1114.5834099358601 80.793 2 0.19928224375307213 0.0006647042066280505 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 135588 12138 YEELQITAGR True PC9_epitope_Rep2 1178.5931518490197 1178.5920499358601 51.998 2 0.19927275574346728 0.0006647042066280505 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 127215 10480 VQIEEVRQV True PC9_epitope_Rep2 1098.6033226098998 1098.6022299358601 45.629 2 0.19926406278339742 0.0006647042066280505 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 92217 20016 RQIDQFLVV True PC9_epitope_Rep3 1116.62914343492 1116.6280499358602 82.239 2 0.1992588104513766 0.0006647042066280505 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 73841 9663 NHEEEISTL True PC9_epitope_Rep5 1070.48801807414 1070.4869299358602 42.135 2 0.1992575965742422 0.0006647042066280505 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 139942 19807 YVIDPIKGLKL True PC9_epitope_Rep2 1257.7696596590097 1257.7680149037901 81.577 3 0.19925076691161955 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 29444 16452 FVHDLVLYL True NCI_RA007_Epitope_Rep5 1117.6171817688898 1117.6160899358601 70.041 2 0.19924667442121088 0.0006647042066280505 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 54595 10501 LADDSVRSL True PC9_epitope_Rep3 974.50327421546 974.50216993586 45.331 2 0.1992451509968283 0.0006647042066280505 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 140400 16367 YYEYNHDLF True PC9_epitope_Rep6 1262.5244035828598 1262.5233099358602 75.34 2 0.199242862356515 0.0006647042066280505 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 114833 11836 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.4974899358601 50.524 2 0.19923283943198158 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 9684 11281 AYHELAQVY True PC9_epitope_Rep4 1092.5240096600398 1092.52290993586 51.169 2 0.19923229696398784 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENSG00000141030|ENST00000268717|COPS3'] 7889 3778 ATAQAVAPPR True NCI_RA007_Epitope_Rep4 980.5403284305198 980.53922993586 20.703 2 0.19922865494639788 0.0006647042066280505 0.9438714419765777 ['ENST00000609438.1_1_4:90171359-90228902:-|nuORF'] 44120 8206 ILNPEEIEK True H1975_Epitope_Rep1 1083.58119018299 1083.58008993586 36.506 2 0.19922647816342948 0.0006647042066280505 0.9438714419765777 ['ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000101182|O14818-2|PSMA7', 'ENST00000484488.5_1_20:60711915-60714832:-|nuORF'] 107327 22637 SYRELFEFF True PC9_epitope_Rep3 1236.5815245361598 1236.5804299358601 92.341 2 0.1992212313817001 0.0006647042066280505 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 132639 9654 VYQHLFTRI True NCI_RA007_Epitope_Rep4 1175.6451278522297 1175.64349490379 43.985 3 0.1992206301261582 0.0006647042066280505 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 23806 13052 EYLENALKL True NCI_RA007_Epitope_Rep4 1091.58627556343 1091.5851699358602 57.305 2 0.19921977879693456 0.0006647042066280505 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7', 'ENSG00000183347|ENST00000370456|GBP6'] 23965 11909 EYPDRIMNTF True NCI_RA007_Epitope_Rep3 1284.5808729131597 1284.5797699358602 53.977 2 0.1992185299127627 0.0006647042066280505 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 70107 21231 LYIVEPLKF True PC9_epitope_Rep1 1120.6532329244399 1120.65212993586 86.489 2 0.1992180048747216 0.0006647042066280505 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 14840 11510 DYETATLSEIK True NCI_RA007_Epitope_Rep1 1268.61361251008 1268.61250993586 48.737 2 0.19920799216187565 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 35301 4150 GSSDVIIHR True NCI_RA007_Epitope_Rep4 982.5195929859399 982.51848993586 22.256 2 0.19920571353532396 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1', 'ENST00000532550.1_1_11:601671-606691:+|nuORF'] 94995 13857 RYQDIIHSI True PC9_epitope_Rep2 1143.6036569630699 1143.6020249037902 58.585 3 0.19920076255259253 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 132087 10741 VYIKHPVSL True PC9_epitope_Rep5 1054.61751612206 1054.61640993586 46.307 2 0.19919695105238477 0.0006647042066280505 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 136463 5639 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 27.074 2 0.19919685675262266 0.0006647042066280505 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 139551 16458 YTLSKTEFL True PC9_epitope_Rep4 1100.5753765265601 1100.57426993586 71.275 2 0.19919463026904863 0.0006647042066280505 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 13431 5456 DNQLSEVANK True H1975_Epitope_Rep3 1116.54111627616 1116.54000993586 26.042 2 0.19919158519061894 0.0006647042066280505 0.9438714419765777 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENST00000476468.5_2_10:103912191-103916993:+|nuORF'] 140489 21238 YYIFIPSKF True PC9_epitope_Rep3 1176.6219327961599 1176.62082993586 86.983 2 0.19919037243423524 0.0006647042066280505 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 89366 8903 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1339.5714308087101 1339.5703299358602 39.212 2 0.19918879382120636 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 7091 6102 AQYEDIANR True NCI_RA007_Epitope_Rep1 1078.5043368446197 1078.5032299358602 27.773 2 0.19918827948618384 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 8071 13730 ATEEAPYWTY True H1975_Epitope_Rep3 1229.5240692296898 1229.5229699358601 58.109 2 0.1991853533136379 0.0006647042066280505 0.9438714419765777 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'CHPT1|p.C163Lfs*31|1|0.31|ENSG00000111666|chr12:101714559-101714560|-/T|frameshift_variant', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 60235 9964 LIDQDARDLY True H1975_Epitope_Rep3 1220.60371653272 1220.60260993586 43.36 2 0.19918320012641227 0.0006647042066280505 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion'] 10025 18663 AYTPFHAVL True PC9_epitope_Rep5 1017.5283667644899 1017.52726993586 76.81 2 0.19917764836973975 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 46244 9251 ITDSAGHILY True H1975_Epitope_Rep3 1088.55022440788 1088.54912993586 40.575 2 0.19917202329016934 0.0006647042066280505 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 102561 17548 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51289496793 72.291 1 0.1991713017025707 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 9994 10712 AYSSYVHQY True PC9_epitope_Rep5 1116.48762415132 1116.48652993586 46.194 2 0.19916060037277242 0.0006647042066280505 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 38788 7272 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.5406899358602 33.359 2 0.19915920816120775 0.0006647042066280505 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 135244 13007 YAYDGKDYLAL True NCI_RA007_Epitope_Rep1 1290.6132185872598 1290.6121299358601 54.586 2 0.19914213241741915 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 29694 11957 FVNVVPTFGK True H1975_Epitope_Rep1 1106.6124307416198 1106.61132993586 50.997 2 0.1991417748908719 0.0006647042066280505 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 76115 4705 NRPGTVSSL True PC9_epitope_Rep6 929.49304388493 929.49194993586 25.49 2 0.19913656572045454 0.0006647042066280505 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 133312 5197 WEQQEPGERKL True H1975_Epitope_Rep3 1398.6891774921799 1398.68752490379 25.08 3 0.19913445047637146 0.0006647042066280505 0.9438714419765777 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 20690 19688 EQIKFFEEV True PC9_epitope_Rep2 1167.5811901829898 1167.58008993586 81.116 2 0.1991328818207842 0.0006647042066280505 0.9438714419765777 ['ENSG00000143155|ENST00000367833|TIPRL', 'nc|ENSG00000143155|O75663-2|TIPRL'] 110687 20495 TIYKDFVYI True PC9_epitope_Rep5 1160.6117620352798 1160.6106699358602 83.873 2 0.19912101207347077 0.0006647042066280505 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 104711 8526 STDGEVETQVY True H1975_Epitope_Rep1 1226.53027680894 1226.5291699358602 37.723 2 0.1991155744789095 0.0006647042066280505 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR'] 134857 16537 YAAELIERV True PC9_epitope_Rep1 1062.57095985246 1062.5698699358602 68.432 2 0.19910125950720822 0.0006647042066280505 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 24643 9586 FASHVSPEV True PC9_epitope_Rep1 971.47124581119 971.47014993586 41.729 2 0.19910123995383852 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 139254 8156 YTDATPLRV True H1975_Epitope_Rep1 1034.53965972418 1034.53856993586 36.313 2 0.19910108379617647 0.0006647042066280505 0.9438714419765777 ['ENSG00000185163|ENST00000397333|DDX51', 'ENST00000545991.1_1_12:132626393-132626546:-|nuORF', 'ENST00000546058.1_1_12:132626393-132626917:-|nuORF', 'ENST00000329073.8_1_12:132625785-132627411:-|nuORF'] 76543 10289 NTDPSIVM[Oxidation]TY True H1975_Epitope_Rep3 1155.51179067427 1155.51068993586 44.628 2 0.19910092357651973 0.0006647042066280505 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 132911 19206 VYTTTVHWL True PC9_epitope_Rep5 1118.5760452329 1118.57494993586 78.915 2 0.19909969533994384 0.0006647042066280505 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 138239 7844 YQTEKGITV True PC9_epitope_Rep4 1037.5393253710097 1037.53822993586 37.585 2 0.19909161345639695 0.0006647042066280505 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 7869 6781 ATANQIILK True NCI_RA007_Epitope_Rep4 970.58113061334 970.58002993586 32.704 2 0.1990777682797118 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 69471 11838 LVSESSDILPK True PC9_epitope_Rep2 1186.6445187155398 1186.64342993586 50.864 2 0.19907292756557363 0.0006647042066280505 0.9438714419765777 ['CON__H-INV:HIT000292931'] 25908 20194 FGLARAFGV True PC9_epitope_Rep5 936.5181364339599 936.51702993586 82.722 2 0.1990588716753516 0.0006647042066280505 0.9438714419765777 ['ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'ENST00000554619.5_1_12:56361683-56363594:+|nuORF', 'ENST00000556656.5_1_12:56361683-56365109:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2'] 76071 14535 NRLTFASTL True PC9_epitope_Rep4 1021.55564414149 1021.55454993586 63.823 2 0.19905642893993225 0.0006647042066280505 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 29448 20716 FVHDLVLYL True PC9_epitope_Rep4 1117.6171817688898 1117.6160899358601 87.847 2 0.19905628561632738 0.0006647042066280505 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 47896 21016 IYVHDLLTF True PC9_epitope_Rep2 1119.59644632431 1119.5953499358602 86.291 2 0.19904409765864084 0.0006647042066280505 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 132947 21145 VYTVVDEMFL True PC9_epitope_Rep6 1214.5893123385397 1214.58820993586 94.18 2 0.19904015718647253 0.0006647042066280505 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 109670 14168 THEDGVLEL True PC9_epitope_Rep2 1011.48728979815 1011.48618993586 59.766 2 0.199038437535039 0.0006647042066280505 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 4797 16004 ALELDSNLYR True PC9_epitope_Rep2 1192.60880191316 1192.6077099358602 66.815 2 0.19903625556983934 0.0006647042066280505 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 104121 20907 SRYLYTLVI True PC9_epitope_Rep5 1126.6386454894598 1126.63754993586 85.474 2 0.1990249851269479 0.0006647042066280505 0.9438714419765777 ['ENSG00000172809|ENST00000311111|RPL38'] 25453 11191 FEMDEKDFAA True H1975_Epitope_Rep2 1201.4961402296901 1201.4950499358602 48.086 2 0.19902238407476022 0.0006647042066280505 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ARHGEF2|p.P672Qfs*7|2|0.14|ENSG00000116584|chr1:155952207-155952207|C/-|frameshift_variant'] 27767 21280 FQEEDFPAL True PC9_epitope_Rep5 1094.4920408254197 1094.49094993586 86.906 2 0.1990217448326943 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 17270 21535 EHDAFIFAL True PC9_epitope_Rep2 1061.51819600361 1061.5170899358602 88.301 2 0.19902094565184414 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 49384 19567 KIIGAVDQIQL True PC9_epitope_Rep5 1196.71287305888 1196.71176993586 80.314 2 0.1990174351103373 0.0006647042066280505 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 24035 10692 EYQDLLNVK True NCI_RA007_Epitope_Rep2 1120.5764391557198 1120.57534993586 46.19 2 0.19899082473751348 0.0006647042066280505 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 70569 7390 LYWSHPRKF True NCI_RA007_Epitope_Rep4 1232.6454622053996 1232.6438249037901 35.068 3 0.19898226650885648 0.0006647042066280505 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 72835 9155 NALLSLAK True H1975_Epitope_Rep3 828.50690304392 828.50580993586 40.204 2 0.1989821780037949 0.0006647042066280505 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 132373 16573 VYMELSQKL True PC9_epitope_Rep3 1109.57908200801 1109.5779899358602 68.887 2 0.19897700433529286 0.0006647042066280505 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 76179 18632 NRSQIYFTL True PC9_epitope_Rep2 1140.5927579262 1140.5916699358602 77.033 2 0.19897012752016116 0.0006647042066280505 0.9438714419765777 ['ENST00000472173.5_1_X:118112321-118146861:+|nuORF', 'nc|ENSG00000175556|Q496Y0-3|LONRF3', 'ENSG00000175556|ENST00000371628|LONRF3', 'nc|ENSG00000175556|Q496Y0-2|LONRF3'] 9451 5030 AVVVPSGEEQR True H1975_Epitope_Rep3 1169.6040508858898 1169.6029499358601 24.469 2 0.19896802470382297 0.0006647042066280505 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'ENST00000463348.5_1_6:30229165-30231201:+|nuORF', 'ENST00000482052.5_1_6:30229165-30260340:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 83061 19356 PYLFHVVTF True PC9_epitope_Rep6 1121.59096702105 1121.5898699358602 87.101 2 0.1989656494843712 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 76713 12724 NTPEYMEKI True PC9_epitope_Rep5 1123.52196105471 1123.5208699358602 53.95 2 0.1989630023768484 0.0006647042066280505 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 138864 5858 YSDMREANY True H1975_Epitope_Rep2 1147.46042342731 1147.45932993586 27.518 2 0.19896197049328487 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 116499 8467 TYDNVHQQF True PC9_epitope_Rep2 1150.5043368446202 1150.5032299358602 37.935 2 0.1989602129057981 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 140334 11348 YYEEQHPEL True PC9_epitope_Rep5 1206.5193182024198 1206.51822993586 48.647 2 0.19895152983152445 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 82135 10848 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.4705499358602 46.756 2 0.19895107156097228 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 129908 6299 VTLTSEEEAR True PC9_epitope_Rep2 1133.5564319871298 1133.55532993586 29.626 2 0.1989426760753262 0.0006647042066280505 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 8047 10481 ATDWGDTQAY True H1975_Epitope_Rep3 1126.4567179458597 1126.45562993586 45.378 2 0.19893736510624335 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 82159 15078 PTDYADIMM[Oxidation]GY True H1975_Epitope_Rep2 1291.51007642211 1291.50896993586 63.149 2 0.1989289901225892 0.0006647042066280505 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 34484 14241 GQDGQLKGFAV True PC9_epitope_Rep1 1118.5720224816198 1118.57092993586 59.603 2 0.19892811777794311 0.0006647042066280505 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 21402 8863 ERM[Oxidation]PEQIRL True PC9_epitope_Rep5 1186.6128421282199 1186.61119490379 39.035 3 0.1989252538863704 0.0006647042066280505 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 38369 19260 HGFAGYFETV True PC9_epitope_Rep2 1126.5083595959 1126.5072699358602 79.458 2 0.19892060258470817 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5', 'ENST00000557758.1_1_14:23391634-23392032:-|nuORF'] 103941 17929 SRPPLLGF True PC9_epitope_Rep2 885.50723739709 885.50614993586 74.27 2 0.19891814899948942 0.0006647042066280505 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 14648 9633 DVNAAIATIK True NCI_RA007_Epitope_Rep2 1014.57095985246 1014.56986993586 42.086 2 0.19891233047691786 0.0006647042066280505 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 21357 19461 ERLLGNFSL True PC9_epitope_Rep4 1047.57129420563 1047.57018993586 82.973 2 0.19890597982751443 0.0006647042066280505 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 40447 7809 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.4134299358602 34.984 2 0.19889634741819276 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 106927 7937 SYISRTNQL True PC9_epitope_Rep6 1080.5563724174801 1080.55526993586 39.972 2 0.19888202603660315 0.0006647042066280505 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 107451 19924 SYVRSLPFF True PC9_epitope_Rep4 1114.5811306133398 1114.58002993586 84.772 2 0.19888139930293877 0.0006647042066280505 0.9438714419765777 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 5234 12300 ALQEMVHQV True PC9_epitope_Rep5 1053.52771514149 1053.52660993586 52.302 2 0.19887915779202492 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 32964 13071 GISRQGIIAV True PC9_epitope_Rep2 1012.6029286870798 1012.60182993586 55.556 2 0.19887820562323677 0.0006647042066280505 0.9438714419765777 ['ENSG00000005100|ENST00000225296|DHX33'] 12317 8803 DITSDTSGDFR True NCI_RA007_Epitope_Rep1 1212.5258601348398 1212.5247699358601 38.243 2 0.19887205946342792 0.0006647042066280505 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 67341 8512 LTDRELEEY True H1975_Epitope_Rep2 1166.54553295026 1166.54442993586 37.696 2 0.19886224698257618 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 1254 7713 AEDPETQVV True H1975_Epitope_Rep2 986.4556553166999 986.45454993586 34.621 2 0.19885832919643195 0.0006647042066280505 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 131889 19684 VYDVVELKF True PC9_epitope_Rep4 1110.5961119711399 1110.5950099358602 83.836 2 0.19885829034388222 0.0006647042066280505 0.9438714419765777 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 95694 10460 SAYDGKDYIA True PC9_epitope_Rep5 1101.49785448185 1101.4967499358602 45.221 2 0.1988573795780481 0.0006647042066280505 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 84057 8992 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 39.542 2 0.19885441118451064 0.0006647042066280505 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 70348 19232 LYPQFM[Oxidation]FHL True PC9_epitope_Rep6 1210.5845021220598 1210.5834099358601 86.628 2 0.19884972997486886 0.0006647042066280505 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 93889 18474 RVIDDSLVVGV True PC9_epitope_Rep2 1170.66083748602 1170.6597499358602 76.394 2 0.1988448561223762 0.0006647042066280505 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 102175 5520 SPRVPNSSV True PC9_epitope_Rep1 941.49304388493 941.49194993586 26.063 2 0.19883934660468008 0.0006647042066280505 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'LTBP1-BIRC6|4|fusion', 'LTBP1-BIRC6|5|fusion', 'ENST00000471232.5_1_2:32750532-32815924:+|nuORF'] 39985 5824 HQRITEEL True NCI_RA007_Epitope_Rep2 1024.53015766964 1024.5290699358602 27.272 2 0.19883487083803286 0.0006647042066280505 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 92120 8603 RPYQPLPEA True PC9_epitope_Rep6 1069.55564414149 1069.5545499358602 42.901 2 0.19883369094106887 0.0006647042066280505 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 92117 10508 RPYQPLPEA True PC9_epitope_Rep5 1069.55564414149 1069.5545499358602 45.406 2 0.19883201043666127 0.0006647042066280505 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 94441 21114 RYFLPPYTF True PC9_epitope_Rep2 1202.6124307416196 1202.61132993586 86.674 2 0.1988200529923387 0.0006647042066280505 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 65048 6654 LSDKNIEQY True H1975_Epitope_Rep3 1108.540053647 1108.53894993586 30.547 2 0.19881281331107806 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 66583 5234 LSSPATLNSR True NCI_RA007_Epitope_Rep5 1044.5563724174801 1044.55526993586 26.83 2 0.19881145386384672 0.0006647042066280505 0.9438714419765777 ['CON__P00761'] 29252 17874 FVDEYDPTI True PC9_epitope_Rep6 1097.49170647225 1097.4906099358602 81.379 2 0.19880755308755613 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 46943 20180 IVLPEDLQL True PC9_epitope_Rep6 1038.5961119711399 1038.5950099358602 90.295 2 0.19880747804099802 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 74605 7694 NLDQATRVAY True H1975_Epitope_Rep3 1149.5778361380499 1149.5767299358602 34.576 2 0.19880244571096745 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 47490 20311 IYKPVTDFF True PC9_epitope_Rep5 1128.5855472874398 1128.5844499358602 83.17 2 0.19879851824888964 0.0006647042066280505 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF', 'ENST00000472420.5_1_2:44123526-44126707:-|nuORF'] 61689 17713 LLIDDKGTIKL True PC9_epitope_Rep2 1227.74383883399 1227.74218490379 73.415 3 0.198797518830031 0.0006647042066280505 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 35185 8008 GSDFYSM[Oxidation]HY True H1975_Epitope_Rep2 1121.41241098617 1121.4113099358601 35.75 2 0.19879338100286612 0.0006647042066280505 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 31218 10562 GDLGIEIPAEK True H1975_Epitope_Rep1 1140.60265390356 1140.60154993586 45.578 2 0.19878353959087258 0.0006647042066280505 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 93814 17727 RVAQLEQVYI True PC9_epitope_Rep5 1217.6768219033297 1217.67572993586 73.203 2 0.19878275403416285 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 133032 16591 VYVQNVVKL True PC9_epitope_Rep3 1060.6280808057597 1060.6269899358601 68.954 2 0.1987709616540999 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 20673 8658 EQIEAGTPGRL True PC9_epitope_Rep6 1169.6040508858898 1169.6029499358601 43.138 2 0.19876907690509182 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 27639 23188 FQAEIAQLMSL True PC9_epitope_Rep3 1249.63765951329 1249.63656993586 94.463 2 0.19875883140026465 0.0006647042066280505 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 71161 5810 MEVKPSSVTA True H1975_Epitope_Rep2 1047.52704643515 1047.5259499358601 27.339 2 0.198758085895924 0.0006647042066280505 0.9438714419765777 ['BTG3|p.P193Afs*29|1|0.14|ENSG00000154640|chr21:17594276-17594277|-/T|frameshift_variant', 'ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 86788 13077 QRNEVVVEL True PC9_epitope_Rep2 1084.58767254576 1084.58656993586 55.579 2 0.198756734900754 0.0006647042066280505 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 77192 15407 NYGLRTFLF True NCI_RA007_Epitope_Rep3 1129.59202965021 1129.59092993586 68.158 2 0.19875338896013034 0.0006647042066280505 0.9438714419765777 ['ENSG00000130158|ENST00000294618|DOCK6', 'ENST00000586702.1_1_19:11310175-11313198:-|nuORF'] 27328 11060 FMDPGPEGKLY True H1975_Epitope_Rep1 1252.579810284 1252.5787099358602 47.503 2 0.19875255165314487 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 74603 7606 NLDQATRVAY True H1975_Epitope_Rep2 1149.5778361380499 1149.5767299358602 34.209 2 0.19874310171957082 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 33913 7816 GM[Oxidation]DVELTVEER True H1975_Epitope_Rep1 1292.59183190012 1292.59072993586 35.019 2 0.19873727608810568 0.0006647042066280505 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 104866 15111 STEQIPILY True H1975_Epitope_Rep3 1062.5597264624198 1062.5586299358602 63.522 2 0.19873403772272022 0.0006647042066280505 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 109706 20792 THFLQPIYL True PC9_epitope_Rep1 1130.6124307416198 1130.61132993586 84.807 2 0.19872945586178078 0.0006647042066280505 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 21824 8674 ESDSRQIFY True H1975_Epitope_Rep2 1143.5196525555898 1143.5185499358602 38.325 2 0.1987235776720259 0.0006647042066280505 0.9438714419765777 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF', 'SLC30A5|p.E412K|1|0.15|ENSG00000145740|chr5:69116555-69116555|G/A|missense_variant'] 64327 9524 LQNEPLPERL True NCI_RA007_Epitope_Rep5 1207.6560864587498 1207.6549899358602 43.27 2 0.19872097855409024 0.0006647042066280505 0.9438714419765777 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 135617 6249 YEENSHLTSV True H1975_Epitope_Rep3 1177.52513185885 1177.5240299358602 29.048 2 0.19870993145101593 0.0006647042066280505 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2'] 24757 14778 FAYDGKDYL True PC9_epitope_Rep6 1090.4971262058598 1090.4960299358602 68.804 2 0.19870690142161246 0.0006647042066280505 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 25371 7404 FEIATKEDP True H1975_Epitope_Rep3 1048.5076908895599 1048.5065899358601 33.457 2 0.1987059659798016 0.0006647042066280505 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 94538 21653 RYILEPFFI True PC9_epitope_Rep4 1196.65938093404 1196.65828993586 91.48 2 0.19869644978029816 0.0006647042066280505 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 117138 18548 TYSPALNKMF True PC9_epitope_Rep5 1170.5743309807401 1170.5732299358601 76.368 2 0.1986949727889914 0.0006647042066280505 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 53503 15548 KVLNELTQL True PC9_epitope_Rep4 1056.6179100448799 1056.6168099358601 67.728 2 0.19869329892991724 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 138780 11089 YSDDNPYYNY True H1975_Epitope_Rep3 1312.48841199696 1312.4873099358601 47.746 2 0.19868619490551365 0.0006647042066280505 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 119355 4931 VENIQRVAA True NCI_RA007_Epitope_Rep3 998.5508931142198 998.54978993586 26.388 2 0.19868521896017075 0.0006647042066280505 0.9438714419765777 ['ENSG00000173801|ENST00000393931|JUP'] 75723 7670 NQWDGTQHGV True PC9_epitope_Rep2 1140.49483479008 1140.49372993586 34.871 2 0.19867530138897083 0.0006647042066280505 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 105528 11213 SVDPHGFISY True H1975_Epitope_Rep2 1120.5189242796 1120.5178299358602 48.172 2 0.19867317350916347 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 70979 15773 MEQISQFLQA True H1975_Epitope_Rep2 1193.57505925673 1193.57396993586 65.85 2 0.19866867812293393 0.0006647042066280505 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 73930 14116 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69592490379 66.166 3 0.19866044949140452 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 104394 3649 SSGVPNPPK True NCI_RA007_Epitope_Rep4 881.4606811274899 881.45958993586 20.125 2 0.19865944983681974 0.0006647042066280505 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2'] 129361 12170 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.5222499358601 51.83 2 0.19865893770473828 0.0006647042066280505 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 40394 18333 HRTEMDWVL True PC9_epitope_Rep5 1185.5600778989299 1185.55843490379 75.533 3 0.19865588455325764 0.0006647042066280505 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 115257 11197 TVDGVVFHY True H1975_Epitope_Rep1 1035.50254593947 1035.5014499358601 48.038 2 0.19865317638093827 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'VCAN-CNTNAP3B|1|fusion'] 37556 15735 GYPLWKVTF True NCI_RA007_Epitope_Rep5 1109.59096702105 1109.5898699358602 67.242 2 0.1986515783545116 0.0006647042066280505 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 75523 19953 NQLDGIHLL True PC9_epitope_Rep1 1021.5556441414899 1021.55454993586 81.572 2 0.1986374123408237 0.0006647042066280505 0.9438714419765777 ['DHRS1-METTL3|1|fusion', 'ENSG00000165819|ENST00000298717|METTL3'] 38736 7800 HHTTQQTFL True PC9_epitope_Rep1 1111.54105670651 1111.53994993586 34.826 2 0.19863589742355192 0.0006647042066280505 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 96283 5644 SEETLDEGPPK True NCI_RA007_Epitope_Rep1 1200.55101225352 1200.5499099358601 26.014 2 0.19862951161354953 0.0006647042066280505 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 119114 5606 VEILANDQGNR True H1975_Epitope_Rep3 1227.6207635791898 1227.6196699358602 26.604 2 0.19862748572286165 0.0006647042066280505 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 11837 18229 DHMRFISEL True PC9_epitope_Rep5 1146.54917886206 1146.54754490379 75.13 3 0.19862737899210683 0.0006647042066280505 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 21038 12135 ERDAYVQAL True PC9_epitope_Rep5 1063.52982331647 1063.5287299358602 51.667 2 0.19862597665799364 0.0006647042066280505 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 15384 7996 EALQDVEDENQ True H1975_Epitope_Rep3 1288.5419041218 1288.5408099358601 35.727 2 0.1986220182431254 0.0006801564359802754 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000435487.1_1_7:56635601-56635700:-|nuORF'] 61392 14021 LLENDVSTLGY True H1975_Epitope_Rep2 1222.60813320682 1222.60702993586 59.081 2 0.19860896156072633 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 73808 10416 NHDTGEYVL True PC9_epitope_Rep2 1046.46688870674 1046.4657899358601 45.387 2 0.19860725826764963 0.0006801564359802754 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 76813 16543 NVELDPEIQ True PC9_epitope_Rep5 1055.51350454599 1055.51297496793 68.634 1 0.1986054103269307 0.0006801564359802754 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 43736 20758 IITDLLRSV True PC9_epitope_Rep5 1028.62299542532 1028.62188993586 84.898 2 0.19859881110258445 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162613|Q96AE4-2|FUBP1', 'ENSG00000162613|ENST00000370768|FUBP1', 'FUBP1|p.Q546Hfs*15|1|0.43|ENSG00000162613|chr1:77956623-77956639|GTGGCTGTGCTTGCTGT/-|frameshift_variant'] 132869 8810 VYTSGVYHI True NCI_RA007_Epitope_Rep3 1037.51819600361 1037.5170899358602 41.745 2 0.1985938766921205 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 132416 5962 VYNNNSSRF True PC9_epitope_Rep1 1099.50467119779 1099.50356993586 27.747 2 0.19858033903146682 0.0006801564359802754 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant'] 29225 16574 FVDDYTVRV True PC9_epitope_Rep5 1112.55022440788 1112.54912993586 68.756 2 0.19857074036165115 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 65320 15619 LSELEAALQR True PC9_epitope_Rep3 1128.6138872935999 1128.61278993586 65.227 2 0.19857018404653254 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 104791 8697 STDPREALQY True H1975_Epitope_Rep3 1178.5567663402999 1178.5556699358601 38.452 2 0.1985683997005567 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 104338 6026 SSETEVALAR True NCI_RA007_Epitope_Rep2 1061.5353026197297 1061.5342099358602 28.048 2 0.19856192051480936 0.0006801564359802754 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 132423 16696 VYNPELDKW True PC9_epitope_Rep5 1162.5658744720197 1162.56476993586 69.225 2 0.1985597680665667 0.0006801564359802754 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 39669 10923 HPTEDLVVSA True PC9_epitope_Rep1 1066.5294889632999 1066.52838993586 46.901 2 0.1985578720977496 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 94526 14274 RYIEFHSQSGF True PC9_epitope_Rep5 1369.6414990237697 1369.6398449037902 59.908 3 0.19854843364455124 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10'] 112049 15138 TLTEEGVIKV True PC9_epitope_Rep1 1087.6124903112698 1087.6113899358602 63.051 2 0.19854828396000648 0.0006801564359802754 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 124289 6290 VLDETRTAY True H1975_Epitope_Rep3 1066.5294889632999 1066.52838993586 29.199 2 0.19854359167033814 0.0006801564359802754 0.9438714419765777 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-2|ASCC2', 'ENST00000458594.5_1_22:30197094-30223519:-|nuORF', 'nc|ENSG00000100325|Q9H1I8-3|ASCC2'] 63015 12181 LNGTDPEDVIR True PC9_epitope_Rep2 1227.60953018915 1227.6084299358602 52.166 2 0.19853521891406758 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 91143 13533 RLPDIPLRQV True PC9_epitope_Rep6 1205.72444080209 1205.72278490379 63.786 3 0.1985329134796749 0.0006801564359802754 0.9438714419765777 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF'] 12642 9246 DLEGLSQR True PC9_epitope_Rep5 916.46140940348 916.46030993586 40.511 2 0.19852025605378884 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 124779 20178 VLKVFLENV True PC9_epitope_Rep5 1059.63283183303 1059.6317299358602 82.663 2 0.19851746326098763 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 75708 16996 NQVLNLIKA True PC9_epitope_Rep1 1011.6076797143498 1011.60658993586 70.198 2 0.19851528714098657 0.0006801564359802754 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 34943 8494 GQWKKGFVL True NCI_RA007_Epitope_Rep5 1061.6022004110898 1061.6011099358602 39.356 2 0.1985057054449079 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 17891 4890 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 23.893 2 0.19850035331561908 0.0006801564359802754 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 54153 20561 KYNDNFFGL True PC9_epitope_Rep5 1116.5240096600398 1116.52290993586 84.132 2 0.19849886134936442 0.0006801564359802754 0.9438714419765777 ['ENSG00000012963|ENST00000013070|UBR7'] 25261 9496 FEDETIRNI True H1975_Epitope_Rep2 1135.55095268387 1135.54984993586 41.495 2 0.19849015661989622 0.0006801564359802754 0.9438714419765777 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 54210 16362 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 70.94 2 0.19848583831124808 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 84875 10931 QHQSGIVQL True PC9_epitope_Rep5 1008.5352430500798 1008.53414993586 47.036 2 0.19848094036725364 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 92343 8365 RQPDSGISSI True PC9_epitope_Rep2 1058.5356369729 1058.53452993586 37.547 2 0.1984767470134236 0.0006801564359802754 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 109653 6880 THDQAVQAL True PC9_epitope_Rep3 981.4879585044899 981.48686993586 31.479 2 0.1984751642833267 0.0006801564359802754 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 127354 15459 VQPRNWLLF True NCI_RA007_Epitope_Rep3 1171.6502132326698 1171.64910993586 68.364 2 0.19846869178214013 0.0006801564359802754 0.9438714419765777 ['ENSG00000060762|ENST00000360961|MPC1'] 91634 16708 RPFGGLIRDV True PC9_epitope_Rep1 1128.64037682496 1128.63874490379 69.095 3 0.19846854937797528 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 54238 21908 KYPENFFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 89.573 2 0.19846727412031367 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 24208 13747 EYVEKFYRI True PC9_epitope_Rep4 1245.6393737654498 1245.63826993586 60.774 2 0.19846457244433188 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 138105 13460 YQGVNLYVK True PC9_epitope_Rep3 1082.5760452328998 1082.57494993586 56.822 2 0.19846079342359835 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENST00000490798.5_1_20:43550276-43564067:+|nuORF', 'ENST00000476056.5_1_20:43550276-43561823:+|nuORF'] 89496 4524 REQPPTGGNLA True H1975_Epitope_Rep2 1138.57308511078 1138.57198993586 22.513 2 0.19845888499091668 0.0006801564359802754 0.9438714419765777 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 54269 16123 KYPLNLYLL True NCI_RA007_Epitope_Rep5 1135.66413196131 1135.66302993586 68.749 2 0.19845645674707899 0.0006801564359802754 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 130715 11992 VVDLLAPYAK True H1975_Epitope_Rep1 1087.62774645259 1087.62664993586 51.135 2 0.19844122284123938 0.0006801564359802754 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 96633 6128 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 28.55 2 0.19844017269204622 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 103342 5012 SQVEGEHQL True PC9_epitope_Rep3 1025.47778774361 1025.4766899358601 24.37 2 0.19843795783449428 0.0006801564359802754 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 136327 10185 YHADIYDKV True PC9_epitope_Rep3 1122.53457434374 1122.5329349037902 44.129 3 0.1984368895074439 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 22991 18440 EVIRELAGI True PC9_epitope_Rep3 998.5760452328998 998.57494993586 76.133 2 0.1984365788516851 0.0006801564359802754 0.9438714419765777 ['ENSG00000066654|ENST00000396083|THUMPD1'] 132777 21327 VYSQFITQL True PC9_epitope_Rep1 1097.5757108797297 1097.57460993586 86.864 2 0.1984361649237667 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 89351 7356 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 33.302 2 0.19843112398323542 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 17693 18437 EHSLPTLGL True PC9_epitope_Rep3 965.51819600361 965.51708993586 76.121 2 0.19841544049302454 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 68010 16380 LTMEVIRQV True PC9_epitope_Rep2 1087.60596546219 1087.60486993586 68.252 2 0.19840097056853084 0.0006801564359802754 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'NFKBIA|p.L131Wfs*33|1|0.1|ENSG00000100906|chr14:35403306-35403306|G/-|frameshift_variant', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 111088 13619 TLEEDEEELFK True NCI_RA007_Epitope_Rep1 1380.6296564970396 1380.62854993586 56.986 2 0.19840027460074033 0.0006801564359802754 0.9438714419765777 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF'] 26359 12768 FIGNLNTLVVK True H1975_Epitope_Rep1 1216.71795843932 1216.7168699358601 54.173 2 0.19839559382895108 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 2453 5767 AEQMASVQNA True H1975_Epitope_Rep3 1047.46550880775 1047.46497496793 27.21 1 0.19839548941906504 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 34737 5188 GQNPTNAEVLK True NCI_RA007_Epitope_Rep4 1169.6040508858898 1169.6029499358601 26.486 2 0.1983932397644884 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 74151 16114 NHYNNIMAL True PC9_epitope_Rep3 1088.50731405008 1088.5062099358602 67.134 2 0.19838211096328331 0.0006801564359802754 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 23638 13164 EYGFQNALIVR True NCI_RA007_Epitope_Rep2 1308.68263555976 1308.68152993586 55.838 2 0.19836567494334711 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 75946 19557 NRFNYPFEL True PC9_epitope_Rep4 1198.5771078620598 1198.5760099358602 83.349 2 0.1983647731454676 0.0006801564359802754 0.9438714419765777 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF'] 106763 13812 SYFPEITHI True NCI_RA007_Epitope_Rep5 1105.54441075145 1105.5433099358602 59.803 2 0.19836407009888005 0.0006801564359802754 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 53767 16295 KYFDKVVTL True PC9_epitope_Rep1 1111.62774645259 1111.62664993586 67.498 2 0.19836361910205297 0.0006801564359802754 0.9438714419765777 ['ENSG00000166813|ENST00000394412|KIF7'] 117182 13321 TYTDVTPRQF True PC9_epitope_Rep1 1226.59315184902 1226.5920499358601 56.099 2 0.19835302054957643 0.0006801564359802754 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 54410 7764 KYSLIKGNF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 37.662 2 0.19835244042391884 0.0006801564359802754 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 8406 13142 ATQLAADLLKY True H1975_Epitope_Rep3 1205.66558851329 1205.66448993586 55.8 2 0.1983515949485208 0.0006801564359802754 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1'] 40593 2745 HTDILKEKY True H1975_Epitope_Rep2 1145.60807363717 1145.60641490379 14.597 3 0.19835037637153966 0.0006801564359802754 0.9438714419765777 ['DTWD1|p.R271S|1|0.23|ENSG00000104047|chr15:49643476-49643476|A/C|missense_variant', 'nc|ENSG00000104047|Q8N5C7-2|DTWD1', 'ENSG00000104047|ENST00000403028|DTWD1'] 86839 13846 QRQDIAFAY True PC9_epitope_Rep2 1110.5458077337798 1110.54470993586 58.542 2 0.19834985694688964 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 123289 15259 VHSEQVFAL True PC9_epitope_Rep2 1028.5290950404797 1028.5279899358602 63.969 2 0.1983484236136966 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 74843 15097 NLQEAEEWYK True PC9_epitope_Rep2 1308.59863115228 1308.5975299358602 63.329 2 0.19834467313999637 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 69069 17922 LVILEGELER True PC9_epitope_Rep2 1169.6655885132898 1169.66448993586 74.243 2 0.19834211935348936 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 94118 20513 RWFDKSFTF True PC9_epitope_Rep1 1232.59784330664 1232.5961849037901 83.713 3 0.19833894478679984 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 86778 16134 QRMTTQLLL True PC9_epitope_Rep2 1102.6168644990598 1102.61576993586 67.317 2 0.1983386818067845 0.0006801564359802754 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 110524 4122 TIQSGEQPYK True NCI_RA007_Epitope_Rep4 1149.56660274801 1149.56550993586 22.142 2 0.19833678525217263 0.0006801564359802754 0.9438714419765777 ['ENSG00000168653|ENST00000372969|NDUFS5'] 55182 6195 LAPEYEAAATR True NCI_RA007_Epitope_Rep5 1190.59315184902 1190.5920499358601 30.508 2 0.1983236521108039 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 87823 20049 QVIPQFQTV True PC9_epitope_Rep5 1058.5760452328998 1058.57494993586 82.172 2 0.19831142217326753 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 52607 15883 KQALKYFNL True PC9_epitope_Rep3 1123.6389798426299 1123.6378899358601 66.244 2 0.19830436604572335 0.0006801564359802754 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L', 'SEL1L|p.D502H|1|0.09|ENSG00000071537|chr14:81487518-81487518|C/G|missense_variant'] 77335 11700 NYKKFYEQF True PC9_epitope_Rep6 1265.6080736371698 1265.6069699358602 56.138 2 0.1982993857644826 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 59156 5924 LGEYEDVSR True H1975_Epitope_Rep3 1066.49310345458 1066.49200993586 27.795 2 0.19829563739644798 0.0006801564359802754 0.9438714419765777 ['ENST00000589308.1_1_19:36606815-36612715:+|nuORF', 'nc|ENSG00000105254|Q99426-2|TBCB', 'ENST00000392178.8_1_19:36606435-36612715:+|nuORF', 'ENSG00000105254|ENST00000221855|TBCB'] 87344 11351 QTDADFYQQY True H1975_Epitope_Rep3 1277.52004647841 1277.51894993586 48.773 2 0.19829343736801364 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116809|Q13105-3|ZBTB17', 'ENSG00000116809|ENST00000375743|ZBTB17', 'nc|ENSG00000116809|Q13105-2|ZBTB17'] 34938 8230 GQWKKGFVL True NCI_RA007_Epitope_Rep3 1061.6022004110898 1061.6011099358602 39.509 2 0.1982929641369504 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 106171 11627 SVPEFPLSPPK True NCI_RA007_Epitope_Rep5 1196.6441247927198 1196.64302993586 51.374 2 0.19828931111606696 0.0006801564359802754 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 53342 8699 KTQTIFLKY True NCI_RA007_Epitope_Rep4 1140.6542955536 1140.6531899358602 40.251 2 0.19828910594103252 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant'] 53408 16210 KVFDPVPVGV True PC9_epitope_Rep6 1055.60153170475 1055.6004299358601 74.706 2 0.19828389842810512 0.0006801564359802754 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 47940 19379 IYYVDVQKF True PC9_epitope_Rep3 1173.6070110080097 1173.6059099358602 79.765 2 0.19828261124648583 0.0006801564359802754 0.9438714419765777 ['ENSG00000160410|ENST00000291842|SHKBP1'] 133053 15642 VYVVGTAHF True PC9_epitope_Rep1 991.5127167003499 991.51160993586 64.988 2 0.19828154369993978 0.0006801564359802754 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 3842 14894 AGYTDNLVRV True PC9_epitope_Rep5 1106.57202248162 1106.57092993586 62.293 2 0.19828116136084548 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 70159 22377 LYLEPQGTLF True PC9_epitope_Rep1 1179.6175756917098 1179.61646993586 90.889 2 0.19828088517998077 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 33029 19917 GIYTGFIKV True PC9_epitope_Rep5 996.5644179200399 996.56332993586 81.665 2 0.19827794943288513 0.0006801564359802754 0.9438714419765777 ['ENSG00000153179|ENST00000542104|RASSF3'] 55851 18288 LDFEHFLPM[Oxidation]LQ True H1975_Epitope_Rep3 1404.6747736784398 1404.67366993586 76.649 2 0.19827719090695184 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 34674 10274 GQLDTPGVHNV True PC9_epitope_Rep3 1135.56218607391 1135.56108993586 44.468 2 0.19825366035360634 0.0006801564359802754 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 108721 4583 TEM[Oxidation]NGRIVAT True H1975_Epitope_Rep2 1106.5390084816197 1106.5379099358602 22.733 2 0.19825272620360784 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 61116 13656 LLDDAQRLLY True H1975_Epitope_Rep2 1218.66083748602 1218.6597499358602 57.667 2 0.1982344054937937 0.0006801564359802754 0.9438714419765777 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000523439.1_1_19:57999318-58003198:+|nuORF', 'nc|ENSG00000152439|Q6PK81-2|ZNF773', 'ENSG00000152439|ENST00000282292|ZNF773', 'nc|ENSG00000105136|Q96HQ0-6|ZNF419', 'nc|ENSG00000105136|Q96HQ0-2|ZNF419', 'nc|ENSG00000105136|Q96HQ0-3|ZNF419', 'nc|ENSG00000105136|Q96HQ0-4|ZNF419', 'ENSG00000105136|ENST00000221735|ZNF419', 'nc|ENSG00000105136|Q96HQ0-5|ZNF419', 'ENSG00000083814|ENST00000317398|ZNF671'] 67355 7058 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 32.075 2 0.19823399711652473 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 26159 9560 FHNTEVEAM True PC9_epitope_Rep5 1076.45969515132 1076.4585899358601 41.731 2 0.19822336166448046 0.0006801564359802754 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 76506 11673 NTDIAENLY True H1975_Epitope_Rep3 1051.48220441771 1051.48110993586 50.037 2 0.1982198902843913 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 133045 10744 VYVVGTAHF True NCI_RA007_Epitope_Rep1 991.5127167003499 991.51160993586 45.785 2 0.1982142560315099 0.0006801564359802754 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 40342 6113 HRTDSEIAL True PC9_epitope_Rep2 1040.5250722892 1040.5239699358601 28.907 2 0.19821158378101447 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 137326 19134 YLINEIDRI True PC9_epitope_Rep4 1147.62372370131 1147.62262993586 81.693 2 0.19820834194143788 0.0006801564359802754 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 134121 20310 WRDEFLIQA True PC9_epitope_Rep5 1176.5927579262 1176.5916699358602 83.167 2 0.19820191388163497 0.0006801564359802754 0.9438714419765777 ['ENSG00000075785|ENST00000265062|RAB7A', 'RAB7A|p.S101I|2|0.09|ENSG00000075785|chr3:128806493-128806493|G/T|missense_variant'] 14536 10255 DVAYQYVK True PC9_epitope_Rep3 984.4916469026 984.49054993586 44.396 2 0.19819584326082132 0.0006801564359802754 0.9438714419765777 ['ENSG00000106028|ENST00000265304|SSBP1', 'ENST00000489378.5_1_7:141438966-141445458:+|nuORF'] 108452 4724 TEELNREVATN True NCI_RA007_Epitope_Rep5 1274.6102584651396 1274.60916993586 24.855 2 0.19819256819791417 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2'] 113840 11379 TREEGTPLTL True PC9_epitope_Rep4 1115.5822528121498 1115.5811499358601 51.542 2 0.19819235093082546 0.0006801564359802754 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 106109 2634 SVNGKVLSK True NCI_RA007_Epitope_Rep4 930.5498304850599 930.54872993586 14.754 2 0.19818983302854318 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 28853 11870 FTDPRAYLKY True H1975_Epitope_Rep2 1272.6502728023197 1272.64916993586 50.736 2 0.19818560911414887 0.0006801564359802754 0.9438714419765777 ['ENSG00000026652|ENST00000320285|AGPAT4'] 138415 11730 YRDPYTGQSV True PC9_epitope_Rep1 1184.5462016566 1184.5451099358602 49.994 2 0.19818389753315924 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 137100 10538 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.53280993586 45.488 2 0.19817737863652649 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 113593 7722 TRAGPGTLSV True PC9_epitope_Rep4 957.52434401321 957.52324993586 37.089 2 0.19817395017961087 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 9550 20316 AYALLLQHL True PC9_epitope_Rep2 1040.60186605792 1040.6007699358602 83.569 2 0.19817221448937483 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6'] 28087 21277 FRDYFPIQL True PC9_epitope_Rep2 1197.6182443980497 1197.6171499358602 87.304 2 0.1981523018800571 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 106878 20501 SYIEHIFEI True PC9_epitope_Rep4 1149.57062549929 1149.5695299358601 87.006 2 0.19815135468185993 0.0006801564359802754 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 132407 19518 VYNEQIRDLL True PC9_epitope_Rep3 1261.6666511424498 1261.66554993586 80.308 2 0.19812403066196527 0.0006801564359802754 0.9438714419765777 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF', 'KIF18A|p.R666Kfs*29|1|0.22|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant'] 85370 8814 QLDVAGRVM[Oxidation]QY True H1975_Epitope_Rep2 1294.6339714956198 1294.63286993586 38.87 2 0.19811411241629284 0.0006801564359802754 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 37571 12071 GYSEHFVEF True NCI_RA007_Epitope_Rep5 1113.47672511445 1113.47562993586 53.088 2 0.19810814406408417 0.0006801564359802754 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 43034 8978 IGGIGTVPVGR True NCI_RA007_Epitope_Rep2 1024.6029286870798 1024.60182993586 39.535 2 0.19810293834682158 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 14621 10206 DVLLQVDDER True H1975_Epitope_Rep3 1200.59863115228 1200.5975299358602 44.302 2 0.1980917511569697 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 14323 10391 DTDHYFLRY True H1975_Epitope_Rep3 1228.5512870370399 1228.5496349037899 45.026 3 0.198090081933057 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 76661 20952 NTIPLFVQL True PC9_epitope_Rep6 1043.60153170475 1043.6004299358601 93.381 2 0.19808583654709327 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'JUP|p.R582Q|1|0.15|ENSG00000173801|chr17:41758427-41758427|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 84645 14983 QHEEFVTSL True PC9_epitope_Rep3 1088.51383889916 1088.51274993586 62.76 2 0.19808291293246588 0.0006801564359802754 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 94623 18692 RYLDEINLL True PC9_epitope_Rep6 1147.62372370131 1147.62262993586 84.542 2 0.19807874835358477 0.0006801564359802754 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 115612 22008 TVIQFLERI True PC9_epitope_Rep1 1117.64954452633 1117.64844993586 89.477 2 0.1980776693735487 0.0006801564359802754 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 30077 20868 FYMDTSHLF True PC9_epitope_Rep2 1159.5008316873098 1159.4997299358602 85.714 2 0.1980600958999322 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 120108 12920 VFIDKQTNL True PC9_epitope_Rep5 1076.5866099166 1076.58550993586 54.707 2 0.19804564247524892 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 65028 10320 LSDIVIEKY True H1975_Epitope_Rep1 1078.5910265907 1078.58992993586 44.643 2 0.1980425549829403 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'nc|ENSG00000184465|A2RRH5-3|WDR27', 'ENST00000546953.1_1_6:170072345-170089107:-|nuORF'] 132268 19901 VYLDHAGATLF True PC9_epitope_Rep1 1205.6080736371698 1205.6069699358602 81.367 2 0.19803986961559764 0.0006801564359802754 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 104767 4822 STDPAAPNLK True NCI_RA007_Epitope_Rep4 1012.5189242796 1012.51782993586 24.983 2 0.1980385519376709 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 29149 18582 FTVDKDITL True PC9_epitope_Rep3 1050.55972646242 1050.5586299358602 76.702 2 0.198030136477974 0.0006801564359802754 0.9438714419765777 ['ENSG00000170759|ENST00000302418|KIF5B'] 40343 6202 HRTDSEIAL True PC9_epitope_Rep2 1040.5250722892 1040.5239699358601 29.25 2 0.19802408929986917 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 56939 9855 LEDSRLFTA True H1975_Epitope_Rep2 1050.5345743437401 1050.53346993586 42.893 2 0.19802329423659068 0.0006801564359802754 0.9438714419765777 ['ENST00000551157.6_1_12:53896788-53897526:+|nuORF'] 112205 16598 TLVYHVVGV True PC9_epitope_Rep5 985.5596668927699 985.55856993586 68.849 2 0.1980215356556833 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 17427 13683 EHFPQAYSV True PC9_epitope_Rep1 1076.49270953176 1076.4916099358602 57.485 2 0.19802148711249243 0.0006801564359802754 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 19474 8767 ELQEIQLK True NCI_RA007_Epitope_Rep1 999.56006081559 999.55896993586 38.104 2 0.19801587808954804 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 8362 16494 ATMKDFTSL True PC9_epitope_Rep5 1012.48993265044 1012.4888299358599 68.443 2 0.19800938484238007 0.0006801564359802754 0.9438714419765777 ['ENSG00000162063|ENST00000397066|CCNF'] 116596 20155 TYGEIFEKF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 82.575 2 0.19799362962561506 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 114826 17419 TTDFIYQLY True H1975_Epitope_Rep2 1162.55464108198 1162.5540749679299 72.294 1 0.19799150901450355 0.0006801564359802754 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 40539 15015 HSQFLGYPITL True NCI_RA007_Epitope_Rep1 1274.6659228664598 1274.66482993586 62.47 2 0.19798997656878348 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 87786 15252 QVIAGFNRL True PC9_epitope_Rep2 1016.57671393924 1016.57560993586 63.941 2 0.19798410404331443 0.0006801564359802754 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 102903 17962 SQIEADFRL True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 74.395 2 0.197982772007356 0.0006801564359802754 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 140550 17850 YYLNDLERI True PC9_epitope_Rep6 1197.6029882567298 1197.60188993586 81.288 2 0.19797630326892912 0.0006801564359802754 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 41076 19116 HYLDTTTLI True PC9_epitope_Rep1 1075.55497543515 1075.5538699358601 78.32 2 0.1979743497426381 0.0006801564359802754 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 135240 13437 YAYDGKDYLA True PC9_epitope_Rep5 1177.5291546101298 1177.52804993586 56.702 2 0.19796861973045302 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 109949 10006 THSFGNPSI True PC9_epitope_Rep5 958.45084471978 958.44974993586 43.465 2 0.1979587530551651 0.0006801564359802754 0.9438714419765777 ['ENSG00000145012|ENST00000617246|LPP', 'LPP|p.V101Dfs*24|1|0.13|ENSG00000145012|chr3:188484700-188484700|T/-|frameshift_variant'] 94684 10731 RYLEKPMEI True PC9_epitope_Rep4 1177.6165301458898 1177.6154299358602 49.032 2 0.19795059674813925 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 136530 12646 YHQPAPIAQL True PC9_epitope_Rep4 1136.5978433066398 1136.59674993586 56.483 2 0.19794096771387518 0.0006801564359802754 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-4|KHDC4', 'ENST00000466713.1_1_1:155896424-155904164:-|nuORF', 'KIAA0907-UBQLN4|1|fusion', 'nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 52647 21961 KQFDDVLIYL True PC9_epitope_Rep5 1252.6703395405598 1252.66924993586 89.508 2 0.1979293427963296 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105948|A0AVF1-2|IFT56', 'nc|ENSG00000105948|A0AVF1-3|IFT56', 'ENSG00000105948|ENST00000464848|TTC26'] 69873 16851 LYAPYSTHF True PC9_epitope_Rep3 1097.51819600361 1097.5170899358602 69.97 2 0.19792846790065624 0.0006801564359802754 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 76587 6009 NTEEEGLKY True H1975_Epitope_Rep3 1081.4927691014097 1081.49166993586 28.126 2 0.197922104060513 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 46282 6957 ITEDKTELY True H1975_Epitope_Rep3 1110.5444703210999 1110.54336993586 31.722 2 0.19791500184155336 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 75738 12179 NRAAAQYYL True PC9_epitope_Rep3 1068.53524305008 1068.5341499358601 51.882 2 0.1979128628105303 0.0006801564359802754 0.9438714419765777 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4', 'ENST00000427137.1_1_7:46039864-46040332:-|nuORF'] 113205 8912 TQDPTVTRL True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 39.224 2 0.19790930362267065 0.0006801564359802754 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 21358 20532 ERLLGNFSL True PC9_epitope_Rep5 1047.57129420563 1047.57018993586 84.018 2 0.19790306968140767 0.0006801564359802754 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 10921 16551 DAVEDLESVGK True PC9_epitope_Rep3 1160.55609763396 1160.5550099358602 68.803 2 0.19789641407061412 0.0006801564359802754 0.9438714419765777 ['ENSG00000161634|ENST00000293371|DCD', 'nc|ENSG00000161634|P81605-2|DCD'] 44789 19831 IPTPIVGV True PC9_epitope_Rep3 794.49019035062 794.48908993586 81.515 2 0.19789547968282545 0.0006801564359802754 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 9229 9713 AVQEFGLARFK True NCI_RA007_Epitope_Rep4 1264.6928063206399 1264.69117490379 44.207 3 0.19789479901909607 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 18282 9342 EITALAPSTM[Oxidation]K True PC9_epitope_Rep1 1176.6060254122801 1176.6049299358601 40.791 2 0.19789123412516293 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 52013 12720 KLFDDKLQNC True PC9_epitope_Rep1 1222.60160835774 1222.59997490379 53.8 3 0.19788675386815896 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'ENST00000524620.1_1_1:52211285-52225200:+|nuORF', 'ENST00000484890.5_1_1:52211210-52222042:+|nuORF', 'ENST00000473207.6_1_1:52195646-52226369:+|nuORF'] 125352 3925 VLSPADKTNVK True NCI_RA007_Epitope_Rep2 1170.66083748602 1170.65920490379 19.903 3 0.19788575085165994 0.0006801564359802754 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000472694.1_1_16:226715-226811:+|nuORF', 'ENST00000397797.1_1_16:226715-226977:+|nuORF'] 105914 20031 SVLDQKILL True PC9_epitope_Rep1 1027.62774645259 1027.62664993586 81.877 2 0.197878859783405 0.0006801564359802754 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 103332 12938 SQVDVAVKI True PC9_epitope_Rep2 957.5494961318899 957.54838993586 55.061 2 0.1978748605612469 0.0006801564359802754 0.9438714419765777 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000486256.5_1_7:6777360-6777438:+|nuORF'] 16377 10090 EELFIVSK True H1975_Epitope_Rep1 963.5276980581499 963.52660993586 43.747 2 0.19787381849399685 0.0006801564359802754 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 105095 19156 STLHLVLRL True PC9_epitope_Rep1 1050.65496425994 1050.65386993586 78.477 2 0.19787312107496133 0.0006801564359802754 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 104480 7791 SSNIFTVAK True NCI_RA007_Epitope_Rep3 965.51819600361 965.51708993586 37.771 2 0.19786987775910453 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'ENST00000482818.1_1_22:29726183-29727937:-|nuORF'] 120249 10717 VFPDKGYSF True NCI_RA007_Epitope_Rep3 1058.5072969667401 1058.5061899358602 49.202 2 0.19786260983467344 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 6834 18998 AQIDHYLGL True PC9_epitope_Rep5 1028.52909504048 1028.5279899358602 78.103 2 0.19786147030676832 0.0006801564359802754 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 123563 18160 VIIKGLEEI True PC9_epitope_Rep2 1012.6168474157199 1012.61574993586 75.157 2 0.19785470341280062 0.0006801564359802754 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 132312 11727 VYLPNINKI True NCI_RA007_Epitope_Rep3 1072.62808080576 1072.6269899358601 53.239 2 0.19785141099873746 0.0006801564359802754 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 102560 11830 SQANIAQVL True NCI_RA007_Epitope_Rep5 942.5134449763399 942.51289496793 52.16 1 0.19784941235808112 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 77169 7675 NYGDQVQHF True NCI_RA007_Epitope_Rep5 1106.47812209678 1106.4770299358602 36.224 2 0.19784502836756485 0.0006801564359802754 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 45739 20988 ISMPDFDLHL True PC9_epitope_Rep4 1186.5692456003 1186.5681499358602 88.891 2 0.19783218836943592 0.0006801564359802754 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 86731 9953 QRLAEPSQL True PC9_epitope_Rep3 1040.56145779792 1040.56036993586 43.239 2 0.19783084091279898 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 17366 6779 EHDTTEYKL True PC9_epitope_Rep5 1134.51931820242 1134.51822993586 31.046 2 0.19782962797518822 0.0006801564359802754 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 106253 9360 SVQETVLPIK True NCI_RA007_Epitope_Rep4 1112.6441247927198 1112.64302993586 42.858 2 0.19782892306667985 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169057|P51608|MECP2', 'ENSG00000169057|ENST00000453960|MECP2'] 17696 16886 EHSLPTLGL True PC9_epitope_Rep4 965.51819600361 965.51708993586 72.936 2 0.19782892288239198 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 54182 13646 KYPDIISRI True PC9_epitope_Rep6 1103.63389446219 1103.63278993586 64.264 2 0.1978282505748594 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 21825 8603 ESDSRQIFY True H1975_Epitope_Rep3 1143.5196525555898 1143.5185499358602 38.083 2 0.1978225110606427 0.0006801564359802754 0.9438714419765777 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF', 'SLC30A5|p.E412K|1|0.15|ENSG00000145740|chr5:69116555-69116555|G/A|missense_variant'] 53829 15022 KYGALVNNF True PC9_epitope_Rep5 1024.53418042092 1024.53308993586 62.786 2 0.19781639752164953 0.0006801564359802754 0.9438714419765777 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 134507 20064 WVDPNSPVL True PC9_epitope_Rep2 1025.51819600361 1025.5170899358602 82.582 2 0.1978114511077712 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 114138 6419 TRSITNTTV True PC9_epitope_Rep5 991.52982331647 991.52872993586 29.667 2 0.1978098329271248 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 135885 11596 YESEWTNEV True H1975_Epitope_Rep3 1155.47203365683 1155.47092993586 49.735 2 0.1978094358963179 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.K581N|1|0.19|ENSG00000151348|chr11:44232433-44232433|G/T|missense_variant'] 132474 6426 VYPDGIRHI True NCI_RA007_Epitope_Rep3 1068.5716285587998 1068.5705299358601 32.291 2 0.19780603235444064 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 37922 5729 HEDVRLYTA True H1975_Epitope_Rep3 1102.54072235334 1102.5396299358601 27.065 2 0.1977957740346728 0.0006801564359802754 0.9438714419765777 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENST00000590533.1_1_19:2807573-2808419:+|nuORF', 'ENST00000591149.5_1_19:2807001-2808381:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 136371 12875 YHDIAQQAF True PC9_epitope_Rep5 1091.50360856863 1091.5025099358602 54.533 2 0.197793530472251 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 140906 15031 YYVNGTYRL True PC9_epitope_Rep1 1147.56620882519 1147.5651099358602 62.636 2 0.1977878740034963 0.0006801564359802754 0.9438714419765777 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'ENST00000518062.1_1_5:158588183-158590023:-|nuORF'] 55435 14595 LATRALPEL True PC9_epitope_Rep2 982.5811306133398 982.58002993586 61.409 2 0.19778362517960882 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 71724 5470 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 26.093 2 0.1977786744402383 0.0006801564359802754 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 9552 20608 AYALLLQHL True PC9_epitope_Rep5 1040.60186605792 1040.6007699358602 84.317 2 0.19776949410590575 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6'] 21382 16368 ERMEQMYTL True PC9_epitope_Rep1 1199.53148019259 1199.53038993586 67.779 2 0.19775832019698775 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130762|Q5VV41-2|ARHGEF16', 'ENSG00000130762|ENST00000378378|ARHGEF16', 'ENST00000485984.1_1_1:3389348-3394597:+|nuORF'] 89642 8614 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 38.09 3 0.1977528445766955 0.0006801564359802754 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 74292 20131 NIIPRFVQV True PC9_epitope_Rep5 1084.6393141958001 1084.63820993586 82.481 2 0.19775079225278852 0.0006801564359802754 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C'] 73983 19543 NHQDVAGVFAL True PC9_epitope_Rep5 1169.58292151849 1169.58182993586 80.225 2 0.1977422206142412 0.0006801564359802754 0.9438714419765777 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 139290 8466 YTDKIMTY True H1975_Epitope_Rep2 1033.47903361357 1033.4779299358602 37.516 2 0.19773942258593222 0.0006801564359802754 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 36421 19971 GVIEKLLTS True PC9_epitope_Rep3 958.5698972233 958.56880993586 82.064 2 0.19772989470712388 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 138456 11727 YRFGDSQQL True PC9_epitope_Rep4 1112.5250722892 1112.5239699358601 52.868 2 0.19772817382474442 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 70266 16059 LYNPKITSEL True PC9_epitope_Rep1 1176.63903941228 1176.6379499358602 66.584 2 0.19769984756487965 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 126680 17781 VPRPAVLDPAL True PC9_epitope_Rep1 1146.67609362734 1146.6749899358601 73.192 2 0.19767140209146014 0.0006801564359802754 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 24186 15765 EYTRALFLL True NCI_RA007_Epitope_Rep4 1124.62299542532 1124.62188993586 68.464 2 0.1976695924000513 0.0006801564359802754 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2'] 105866 16621 SVKNGFLTI True PC9_epitope_Rep2 977.55458151233 977.55348993586 69.178 2 0.19766695463257636 0.0006801564359802754 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 117201 17510 TYTDVTPRQFF True PC9_epitope_Rep6 1373.6615657620098 1373.6604699358602 79.982 2 0.1976621875303742 0.0006801564359802754 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 13930 18833 DRFFSEYEKL True PC9_epitope_Rep5 1332.6350166609998 1332.6339099358602 77.456 2 0.19766057966000491 0.0006801564359802754 0.9438714419765777 ['ENSG00000135932|ENST00000258418|CAB39'] 76588 5967 NTEEEGLKY True H1975_Epitope_Rep3 1081.4927691014097 1081.49217496793 27.963 1 0.19765493548917956 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 8092 10581 ATELQSMM[Oxidation]Y True H1975_Epitope_Rep2 1088.45183327 1088.4507299358602 45.722 2 0.19765004395777147 0.0006801564359802754 0.9438714419765777 ['ENSG00000196284|ENST00000371459|SUPT3H'] 116098 18106 TVSIIDRF True PC9_epitope_Rep3 949.5232813840499 949.52218993586 74.84 2 0.1976479959379594 0.0006801564359802754 0.9438714419765777 ['ENSG00000134057|ENST00000256442|CCNB1', 'nc|ENSG00000134057|P14635-2|CCNB1'] 3392 9664 [Acetylation]-AGITTIEAVKR True H1975_Epitope_Rep1 1199.68738690333 1199.68628993586 42.098 2 0.19764776990359997 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 77346 21136 NYLDRFLSL True PC9_epitope_Rep4 1139.59750895347 1139.59640993586 89.461 2 0.19764494826045234 0.0006801564359802754 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 138459 21467 YRFLIQNVL True PC9_epitope_Rep1 1164.6655289436399 1164.6644299358602 87.415 2 0.19764172613974373 0.0006801564359802754 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000472894.1_1_9:95018893-95021273:-|nuORF'] 139278 5085 YTDHQNSSSYY True H1975_Epitope_Rep2 1363.5316737912701 1363.53056993586 24.641 2 0.1976261200305971 0.0006801564359802754 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 61142 17596 LLDELPM[Oxidation]IY True H1975_Epitope_Rep2 1121.56784899841 1121.5667499358601 72.997 2 0.19762368003142247 0.0006801564359802754 0.9438714419765777 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 86590 19904 QRDFNMIDL True PC9_epitope_Rep1 1150.54409348162 1150.54298993586 81.378 2 0.1976233410072636 0.0006801564359802754 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 26026 21180 FHDGFLLEV True PC9_epitope_Rep5 1075.53384606775 1075.53274993586 86.52 2 0.19761457592605677 0.0006801564359802754 0.9438714419765777 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'ENST00000586887.1_1_18:12698966-12699161:-|nuORF', 'ENST00000593250.5_1_18:12691430-12699161:-|nuORF'] 21416 10267 ERNLQSDVL True PC9_epitope_Rep2 1072.55128703704 1072.55018993586 44.825 2 0.1976131218598986 0.0006801564359802754 0.9438714419765777 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 102039 6197 SPPPPPPPP True NCI_RA007_Epitope_Rep4 881.4647038787699 881.46360993586 30.446 2 0.19759754087180553 0.0006801564359802754 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 114297 8146 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 38.017 2 0.1975972926020814 0.0006801564359802754 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 125480 9884 VLVDQTTGLSR True PC9_epitope_Rep4 1187.65100107831 1187.64990993586 45.67 2 0.19759330258924931 0.0006801564359802754 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 45572 12694 ISGLIYEETR True PC9_epitope_Rep4 1179.6135529404298 1179.61244993586 56.681 2 0.19758345064291893 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 30078 21104 FYMDTSHLF True PC9_epitope_Rep5 1159.5008316873098 1159.4997299358602 86.241 2 0.19758266745486594 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 87788 14572 QVIAGFNRL True PC9_epitope_Rep4 1016.57671393924 1016.57560993586 63.969 2 0.19758122555028476 0.0006801564359802754 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 29449 21779 FVHDLVLYL True PC9_epitope_Rep5 1117.6171817688898 1117.6160899358601 88.804 2 0.1975806635635554 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 138395 11804 YRDPNTIETL True PC9_epitope_Rep4 1220.60371653272 1220.60260993586 53.172 2 0.1975780735940451 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 44921 3202 IQEAGTEVVK True NCI_RA007_Epitope_Rep1 1072.5764391557198 1072.57534993586 16.349 2 0.1975731700255486 0.0006801564359802754 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 48599 7747 KEIEGIFHA True H1975_Epitope_Rep2 1042.54474510462 1042.54364993586 34.752 2 0.1975697911016656 0.0006801564359802754 0.9438714419765777 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1'] 40893 16898 HVQPYIPSI True PC9_epitope_Rep2 1052.5654805492 1052.5643899358602 70.243 2 0.197561510469832 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'ENST00000465154.1_1_9:130272232-130272589:-|nuORF'] 40372 6544 HRTELETKL True PC9_epitope_Rep5 1125.61422164677 1125.61258490379 30.145 3 0.19755721824705905 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 103660 19499 SRDPIIFSV True PC9_epitope_Rep5 1032.56039516876 1032.55928993586 80.056 2 0.1975545786582647 0.0006801564359802754 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000565049.1_1_16:33499109-33500962:-|nuORF', 'ENST00000554269.1_1_15:20362738-20365460:+|nuORF'] 49021 9832 KFIDTTSKF True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 43.155 2 0.1975523698060053 0.0006801564359802754 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 89068 9424 REELSNVLAA True H1975_Epitope_Rep2 1100.5825871653199 1100.5814899358602 41.217 2 0.19754655516698552 0.0006801564359802754 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 95112 11700 RYVEIVSQF True NCI_RA007_Epitope_Rep5 1139.5975089534697 1139.59640993586 51.657 2 0.1975458950300833 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 91050 20462 RLLDLENIQI True PC9_epitope_Rep4 1225.70303665117 1225.70192993586 86.851 2 0.19754459165108407 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'AOAH-ELMO1|1|fusion', 'AOAH-ELMO1|2|fusion', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ENST00000487843.1_1_7:36895158-37025590:-|nuORF', 'nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 89447 8270 REQDLPLAEA True H1975_Epitope_Rep1 1140.5775017848798 1140.57640993586 36.745 2 0.1975315394431352 0.0006801564359802754 0.9438714419765777 ['ENSG00000169895|ENST00000380155|SYAP1'] 53800 12741 KYFLWEEKF True NCI_RA007_Epitope_Rep3 1288.6492101731599 1288.64755490379 57.349 3 0.197531418134502 0.0006801564359802754 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 46899 17013 IVIRGLNTI True PC9_epitope_Rep2 997.62841515893 997.62730993586 70.692 2 0.19753134507107187 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 70308 20523 LYPEVFEKF True PC9_epitope_Rep5 1170.5961119711399 1170.5950099358602 83.984 2 0.1975279784122937 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 47876 7325 IYTSSVNRL True NCI_RA007_Epitope_Rep4 1051.56620882519 1051.5651099358602 34.813 2 0.19752775272127035 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 70513 17619 LYTEKFEEF True PC9_epitope_Rep2 1204.5652057656796 1204.56467496793 73.05 1 0.1975250736571288 0.0006801564359802754 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 120037 8441 VFEDAAEIR True NCI_RA007_Epitope_Rep2 1048.5189242795998 1048.5178299358602 37.474 2 0.19752240162976603 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 9546 16829 AYAIIKEEL True PC9_epitope_Rep1 1048.580461907 1048.57936993586 69.557 2 0.19751332024719095 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 21217 18676 ERFNVPVSL True PC9_epitope_Rep2 1059.5712942056298 1059.57018993586 77.204 2 0.19751135037859974 0.0006801564359802754 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 113771 8445 TRDPQVNAF True PC9_epitope_Rep2 1046.5145076054998 1046.5134099358602 37.852 2 0.1975098953942206 0.0006801564359802754 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 9225 8056 AVQEFGLAR True NCI_RA007_Epitope_Rep5 989.5294293936498 989.52832993586 37.678 2 0.19750939663914718 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 16378 10278 EELFIVSK True H1975_Epitope_Rep3 963.5276980581499 963.52660993586 44.586 2 0.19750021202445753 0.0006801564359802754 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 93986 12311 RVPKTLVLV True PC9_epitope_Rep2 1023.6804507317898 1023.6793499358599 52.667 2 0.19749757154612266 0.0006801564359802754 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 53307 17734 KTMEDTLMTV True PC9_epitope_Rep3 1167.55154693083 1167.5504499358601 73.411 2 0.1974958320448175 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 53384 8293 KVADGFKVV True PC9_epitope_Rep4 961.5596668927699 961.55856993586 39.359 2 0.19749067952529323 0.0006801564359802754 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 47083 12953 IVVGRITEV True PC9_epitope_Rep4 984.5967806774798 984.59568993586 57.713 2 0.19748542119092294 0.0006801564359802754 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 135554 6322 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 29.252 2 0.19748185478314417 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 77409 17248 NYLVLPNRI True PC9_epitope_Rep6 1100.63422881536 1100.63312993586 78.944 2 0.197466021147476 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 67569 8070 LTEQYNEQY True H1975_Epitope_Rep3 1186.51423282198 1186.51367496793 36.016 1 0.1974620200214441 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 56941 6645 LEDSVIRQA True H1975_Epitope_Rep3 1029.5454733806098 1029.54436993586 30.515 2 0.1974583345260937 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174227|Q5H8A4-4|PIGG', 'nc|ENSG00000174227|Q5H8A4-2|PIGG', 'ENSG00000174227|ENST00000453061|PIGG', 'nc|ENSG00000174227|Q5H8A4-5|PIGG', 'nc|ENSG00000174227|Q5H8A4-6|PIGG'] 53849 12560 KYGPVFSF True NCI_RA007_Epitope_Rep3 943.4803539429099 943.47924993586 56.643 2 0.19745413205559217 0.0006801564359802754 0.9438714419765777 ['ENSG00000001630|ENST00000003100|CYP51A1'] 23844 21053 EYLPIGGLAEF True PC9_epitope_Rep6 1207.6124903112698 1207.6113899358602 93.802 2 0.19745039407214046 0.0006801564359802754 0.9438714419765777 ['CNOT1-GOT2|1|fusion', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2'] 101780 11615 SPIENIQRV True PC9_epitope_Rep1 1054.57710786206 1054.5760099358602 49.555 2 0.1974491321160203 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 37598 9352 GYSFTTTAER True PC9_epitope_Rep2 1131.51965255559 1131.5185499358602 41.309 2 0.19744407398749866 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 54383 10903 KYQKGFSLW True NCI_RA007_Epitope_Rep2 1155.6076797143498 1155.60658993586 47.017 2 0.19743578060367847 0.0006801564359802754 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 47733 10160 IYQKAFEHL True PC9_epitope_Rep2 1147.6025943339098 1147.60093490379 44.418 3 0.19742907541234467 0.0006801564359802754 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 85154 21361 QIYDIFQKL True PC9_epitope_Rep1 1166.6335601090198 1166.6324699358602 86.997 2 0.19742616618438336 0.0006801564359802754 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 25498 4508 FEQAGEPRQP True H1975_Epitope_Rep3 1157.5465360097699 1157.54542993586 22.459 2 0.19742330761247276 0.0006801564359802754 0.9438714419765777 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 76868 7378 NVIGEPIDER True H1975_Epitope_Rep1 1140.5775017848798 1140.57640993586 33.383 2 0.1974217673180313 0.0006801564359802754 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000548647.1_1_12:57037677-57039699:-|nuORF'] 67346 5875 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep1 1056.49099566004 1056.4898899358602 27.666 2 0.19739538139773916 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 131874 19849 VYDPSLKTLL True PC9_epitope_Rep3 1147.64887581999 1147.6477699358602 81.584 2 0.19739088820483738 0.0006801564359802754 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 85326 15880 QLAQFVHEV True PC9_epitope_Rep5 1069.55564414149 1069.5545499358602 66.072 2 0.19738819704157828 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'ENST00000539757.1_1_12:9440801-9462940:+|nuORF', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'ENST00000542244.5_1_12:31237807-31242486:+|nuORF', 'ENST00000535158.5_1_12:31227017-31242187:+|nuORF', 'ENST00000536265.5_1_12:31227017-31242486:+|nuORF', 'ENST00000543026.5_1_12:31240692-31242187:+|nuORF', 'ENST00000542242.1_1_12:31240692-31242486:+|nuORF'] 128365 13438 VSDPTSGLDF True H1975_Epitope_Rep2 1036.4713053808398 1036.4707749679299 56.823 1 0.19738165352258877 0.0006801564359802754 0.9438714419765777 ['ENSG00000213047|ENST00000620048|DENND1B', 'DENND1B|p.E705Kfs*3|1|0.3|ENSG00000213047|chr1:197510675-197510675|C/-|frameshift_variant'] 77232 19948 NYIGLINRI True PC9_epitope_Rep1 1074.61857875122 1074.61748993586 81.552 2 0.19738090680850068 0.0006801564359802754 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 1481 6255 AEEMETGNVA True H1975_Epitope_Rep3 1049.4335399731299 1049.43297496793 29.071 1 0.197378862845526 0.0006801564359802754 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 104451 5829 SSLNLRET True NCI_RA007_Epitope_Rep1 918.47705946762 918.47596993586 26.727 2 0.1973764156103018 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'VIM|p.D429Y|1|0.25|ENSG00000026025|chr10:17236305-17236305|G/T|missense_variant'] 83277 8722 QAFAQVFNK True NCI_RA007_Epitope_Rep3 1051.5450794577898 1051.54398993586 41.395 2 0.1973709087477521 0.0006801564359802754 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 101663 21190 SPFQFTVGP True PC9_epitope_Rep5 978.4810822188999 978.48053496793 86.555 1 0.19737089911459524 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 54373 16690 KYQIINEEF True PC9_epitope_Rep2 1182.5920892198599 1182.59098993586 69.446 2 0.19736306504391765 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 39360 8643 HLVDEPQNLIK True NCI_RA007_Epitope_Rep1 1304.7088503076 1304.7077499358602 37.621 2 0.19735816462254424 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 100132 22417 SLLDIIEKV True PC9_epitope_Rep2 1028.61176203528 1028.6106699358602 91.72 2 0.1973559927243298 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 84070 9051 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 39.8 2 0.19735407694106114 0.0006801564359802754 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 91243 20709 RLSEFIPAVF True PC9_epitope_Rep4 1177.6495445263297 1177.64844993586 87.819 2 0.19734682116367308 0.0006801564359802754 0.9438714419765777 ['ENSG00000164961|ENST00000318410|WASHC5', 'WASHC5|p.Y1056Tfs*28|1|0.3|ENSG00000164961|chr8:125037249-125037252|TGTA/-|frameshift_variant', 'ENST00000523397.1_1_8:126095350-126096053:-|nuORF'] 21552 14412 ERSDLEYQL True PC9_epitope_Rep5 1151.54586730343 1151.5447699358601 60.435 2 0.1973444469635034 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 140818 8654 YYSPTKNEI True PC9_epitope_Rep4 1113.53423999057 1113.5331499358601 40.779 2 0.19733587704918876 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 113667 16467 TRDELEWKL True PC9_epitope_Rep3 1188.6138872935999 1188.61278993586 68.479 2 0.19733107257895713 0.0006801564359802754 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 97785 19001 SHIFEVQAL True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 78.114 2 0.19732942079663954 0.0006801564359802754 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1'] 87333 19438 QTAPEEAFIKL True PC9_epitope_Rep5 1245.6605031328497 1245.6594099358601 79.818 2 0.1973124284572325 0.0006801564359802754 0.9438714419765777 ['TTC30B|p.A478Cfs*6|1|0.11|ENSG00000196659|chr2:177551332-177551333|-/A|frameshift_variant', 'TTC30A|p.A478Cfs*6|1|0.12|ENSG00000197557|chr2:177617270-177617271|-/A|frameshift_variant', 'ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 116809 20767 TYLSIIHSL True PC9_epitope_Rep1 1045.58079626017 1045.5796899358602 84.708 2 0.19729528817961947 0.0006801564359802754 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 139418 7529 YTEKNGQLIY True H1975_Epitope_Rep2 1227.6135529404298 1227.61244993586 33.911 2 0.19729509606033951 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 116960 16317 TYPKIWVKV True PC9_epitope_Rep1 1132.66446631448 1132.66282490379 67.582 3 0.19729083717354526 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 126831 4972 VPSYPSKSA True PC9_epitope_Rep3 934.47599683846 934.47488993586 24.218 2 0.19728819425858496 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 26792 11921 FLDTNETPY True H1975_Epitope_Rep1 1098.48695544498 1098.4858499358602 50.855 2 0.19728569602776166 0.0006801564359802754 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 109649 5824 THDQAVQAL True PC9_epitope_Rep2 981.4879585044899 981.48686993586 27.795 2 0.19728550818681298 0.0006801564359802754 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 82132 10567 PTDGPPNSFY True H1975_Epitope_Rep1 1093.47163973401 1093.4705499358602 45.598 2 0.19728424419871884 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 54034 14596 KYLSGIAHF True PC9_epitope_Rep5 1034.5549158654999 1034.55380993586 61.145 2 0.19727197270524982 0.0006801564359802754 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 53856 14755 KYGRIVEVL True PC9_epitope_Rep1 1075.6389798426299 1075.6378899358601 61.574 2 0.19727094650947738 0.0006801564359802754 0.9438714419765777 ['RBMXL2|p.G376Efs*4|1|0.33|ENSG00000170748|chr11:7090246-7090246|G/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'RBMX|p.M40I|2|0.14|ENSG00000147274|chrX:136879113-136879113|C/T|missense_variant', 'ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'nc|ENSG00000147274|P38159-3|RBMX'] 76000 18943 NRIQDLLEL True PC9_epitope_Rep6 1112.61897267404 1112.6178699358602 85.51 2 0.1972696643697462 0.0006801564359802754 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 252 12606 AAGGVGSIVRV True PC9_epitope_Rep2 984.5716285588 984.57052993586 53.798 2 0.19726667851146024 0.0006801564359802754 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 23767 16524 EYIRSLNQF True PC9_epitope_Rep5 1168.58767254576 1168.58656993586 68.56 2 0.19726432052437723 0.0006801564359802754 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 5776 10310 APELLYYANK True H1975_Epitope_Rep1 1180.61282466444 1180.61172993586 44.603 2 0.19726424309985416 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 89317 9397 RELVKNWVP True NCI_RA007_Epitope_Rep2 1139.64512785223 1139.64402993586 41.161 2 0.19725254963315933 0.0006801564359802754 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 88896 7128 REAQSFISA True NCI_RA007_Epitope_Rep4 1007.5036085686298 1007.50250993586 34.037 2 0.19724973566030382 0.0006801564359802754 0.9438714419765777 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 77571 21059 NYSPYVNYF True PC9_epitope_Rep3 1165.50802524273 1165.5069299358602 86.285 2 0.1972485412472561 0.0006801564359802754 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 109875 14751 THMTAIVGM True PC9_epitope_Rep1 959.4568587003499 959.45576993586 61.558 2 0.1972483962796629 0.0006801564359802754 0.9438714419765777 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 39940 15070 HQNQLLSSL True PC9_epitope_Rep5 1038.5458077337798 1038.54470993586 62.973 2 0.19724161834093887 0.0006801564359802754 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 77211 11694 NYIDKVRFL True NCI_RA007_Epitope_Rep4 1166.64479349906 1166.64313490379 51.942 3 0.19721739326670965 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 138466 15381 YRFNGQYSSL True PC9_epitope_Rep5 1233.5778361380499 1233.5767299358602 64.172 2 0.19721182601476878 0.0006801564359802754 0.9438714419765777 ['ENSG00000182087|ENST00000356663|TMEM259'] 35761 15747 GTVEIFPIFK True NCI_RA007_Epitope_Rep5 1149.6433965167298 1149.6422899358602 67.287 2 0.1972088650371121 0.0006801564359802754 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 47465 23614 IYIWDLNNF True PC9_epitope_Rep5 1196.5866099165999 1196.58550993586 95.81 2 0.19720854672863616 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 70057 17615 LYHDIFSRL True PC9_epitope_Rep2 1162.61349337078 1162.6118549037901 73.035 3 0.19720735285136334 0.0006801564359802754 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 11829 16824 DHMRFISEL True PC9_epitope_Rep2 1146.54917886206 1146.5480899358602 69.962 2 0.19719466616761774 0.0006801564359802754 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 75467 18113 NQIIKLENL True PC9_epitope_Rep1 1083.62880908175 1083.6277099358601 74.464 2 0.19719103567958443 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF', 'CEP97|p.V352Lfs*3|1|0.33|ENSG00000182504|chr3:101757658-101757658|G/-|frameshift_variant'] 65025 12523 LSDISVVSNY True H1975_Epitope_Rep3 1095.54480467427 1095.54370993586 53.366 2 0.1971853727763903 0.0006801564359802754 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.S393F|1|0.37|ENSG00000137965|chr1:78662768-78662768|C/T|missense_variant', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 35340 10231 GSYDPQQIFK True NCI_RA007_Epitope_Rep4 1181.57168812845 1181.5705899358602 46.21 2 0.19717671168994508 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'ENSG00000131653|ENST00000326181|TRAF7'] 93823 9606 RVDPAKGLFY True H1975_Epitope_Rep3 1164.6291434349198 1164.6274949037902 41.964 3 0.1971746249826597 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 138954 9632 YSELASHVVSY True H1975_Epitope_Rep1 1253.59281749585 1253.59172993586 41.977 2 0.19716945560328475 0.0006801564359802754 0.9438714419765777 ['ENSG00000065618|ENST00000648076|COL17A1', 'nc|ENSG00000065618|Q9UMD9-2|COL17A1'] 95988 8561 SEAEKVYIV True H1975_Epitope_Rep2 1036.5440763982797 1036.5429699358601 37.883 2 0.197169416749235 0.0006801564359802754 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7'] 83051 19699 PYLDSFYEY True PC9_epitope_Rep6 1195.5073565363898 1195.50624993586 88.428 2 0.1971691678533483 0.0006801564359802754 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 18024 10525 EIIDPVLDR True H1975_Epitope_Rep1 1068.5815245361598 1068.5804299358601 45.438 2 0.19716840610122116 0.0006801564359802754 0.9438714419765777 ['ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF'] 113075 22491 TPYGYFLISA True PC9_epitope_Rep1 1130.5648118428599 1130.56370993586 91.311 2 0.19716814949500064 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 84585 8788 QHDPETSVL True PC9_epitope_Rep1 1024.48253877088 1024.4814499358602 38.644 2 0.19716092735915433 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 14990 20740 DYTIGFGKF True PC9_epitope_Rep5 1046.50729696674 1046.5061899358602 84.835 2 0.19715790754407655 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 54379 17528 KYQIINEEF True PC9_epitope_Rep5 1182.5920892198599 1182.59098993586 72.427 2 0.1971545147761652 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 104798 8352 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.5331499358601 37.078 2 0.19715348774059155 0.0006801564359802754 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 42960 8484 IGAEVYHNLK True PC9_epitope_Rep1 1142.60840799034 1142.6067749037902 37.469 3 0.19714755108600668 0.0006801564359802754 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 139271 12357 YTDHLQSYVIY True H1975_Epitope_Rep1 1400.6612314088402 1400.6601299358601 52.561 2 0.19714512977139678 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENSG00000090989|ENST00000381295|EXOC1', 'ENST00000511971.5_1_4:56749994-56766742:+|nuORF'] 83201 21197 PYYSKFILI True PC9_epitope_Rep5 1142.6375828603 1142.63648993586 86.582 2 0.1971307969655699 0.0006801564359802754 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5'] 88355 18729 QYMERLQLL True PC9_epitope_Rep4 1192.62742918276 1192.6263299358602 80.122 2 0.19712961357957287 0.0006801564359802754 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 21349 7904 ERLKEAYSV True PC9_epitope_Rep3 1093.57677350889 1093.57566993586 35.384 2 0.19712438625045572 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 74749 18828 NLLPKLHIV True PC9_epitope_Rep5 1045.66480066765 1045.6637099358602 77.437 2 0.19711496420424252 0.0006801564359802754 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 128898 10497 VSTEVDARL True PC9_epitope_Rep3 988.5189242795998 988.51782993586 45.316 2 0.19711282943955336 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 139767 12551 YVAPKAVWL True H1975_Epitope_Rep2 1045.59605240149 1045.59494993586 53.372 2 0.1970915744434665 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000472057.1_1_22:29727525-29736761:-|nuORF', 'ENST00000441188.2_1_X:92477682-92478501:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1'] 132112 18400 VYINTAQEF True PC9_epitope_Rep5 1083.5236753068698 1083.52256993586 75.794 2 0.19708492186591645 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 77381 11095 NYLSHHLTI True PC9_epitope_Rep6 1096.5665431783602 1096.5654499358602 53.603 2 0.19708049767301183 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 73269 5434 NEIKDSVVA True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 25.961 2 0.19707905087630662 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 84833 10366 QHLQATGVSL True PC9_epitope_Rep4 1052.56145779792 1052.56036993586 47.572 2 0.19706991415659175 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 116627 17086 TYHPGVPVF True PC9_epitope_Rep3 1015.5127167003499 1015.51160993586 70.873 2 0.19705999977676844 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1', 'ENST00000533739.1_1_11:89951170-89956122:-|nuORF', 'ENST00000533724.5_1_11:89947115-89956122:-|nuORF', 'ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 106182 9087 SVPEGPWWRK True NCI_RA007_Epitope_Rep5 1240.63529144452 1240.6336349037902 41.608 3 0.19705618161464677 0.0006801564359802754 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 106883 17996 SYIELPAYL True NCI_RA007_Epitope_Rep4 1067.55391280599 1067.55280993586 77.868 2 0.1970345828697225 0.0006801564359802754 0.9438714419765777 ['ENSG00000162511|ENST00000294507|LAPTM5'] 140546 20061 YYLNDLERI True PC9_epitope_Rep1 1197.6029882567298 1197.60188993586 81.991 2 0.1970299321022545 0.0006801564359802754 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 8030 10094 ATDRWYDEY True H1975_Epitope_Rep3 1217.49891711101 1217.4978299358602 43.867 2 0.19702606903232195 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 77221 19964 NYIEFTRIL True PC9_epitope_Rep4 1167.62880908175 1167.6277099358601 84.925 2 0.19701772917413493 0.0006801564359802754 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 132945 23251 VYTVVDEMFL True PC9_epitope_Rep5 1214.5893123385397 1214.58820993586 94.421 2 0.19700839671600662 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 40449 7586 HSDPESDFY True H1975_Epitope_Rep3 1095.41451878071 1095.4134299358602 34.16 2 0.19700647592077467 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 84702 18507 QHFDTIYSI True PC9_epitope_Rep5 1122.53457434374 1122.53346993586 76.211 2 0.19700212819955826 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 48902 7374 KEVEQFTQV True H1975_Epitope_Rep3 1106.56078909158 1106.5596899358602 33.342 2 0.19700039537836017 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 19395 8459 ELPDPQESIQR True NCI_RA007_Epitope_Rep2 1310.64664397386 1310.6455499358601 37.547 2 0.19699992103092231 0.0006801564359802754 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 18628 15123 ELALVDVLEDK True H1975_Epitope_Rep3 1242.67073346338 1242.66962993586 63.57 2 0.19699162309959334 0.0006801564359802754 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 49483 10144 KIYEGQVEV True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 46.696 2 0.19699087953268635 0.0006801564359802754 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 53775 16183 KYFEKQFEL True PC9_epitope_Rep5 1230.6284747285797 1230.62683490379 67.237 3 0.19698843243661668 0.0006801564359802754 0.9438714419765777 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 67499 13240 LTELMFEHY True H1975_Epitope_Rep2 1181.54269649929 1181.5415899358602 56.056 2 0.19698432622335896 0.0006801564359802754 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 91881 12311 RPNSLVGITSA True PC9_epitope_Rep5 1113.61422164677 1113.6131299358601 52.345 2 0.19697095094728734 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 117041 17990 TYQLGFHSI True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 73.991 2 0.19697094861286538 0.0006801564359802754 0.9438714419765777 ['ENSG00000142507|ENST00000270586|PSMB6'] 47398 15141 IYIKHPHLF True PC9_epitope_Rep1 1166.66004964038 1166.6584049037901 63.062 3 0.1969704463517819 0.0006801564359802754 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 83727 10462 QEASEAYLV True H1975_Epitope_Rep1 1008.4763907612797 1008.47528993586 45.197 2 0.19697029690434226 0.0006801564359802754 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'H3C13|p.G103R|1|0.12|ENSG00000183598|chr1:149813375-149813375|C/G|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 68093 7928 LTPDETYVPK True NCI_RA007_Epitope_Rep2 1161.5917548666898 1161.59064993586 35.469 2 0.19696621329834466 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 88920 8500 REDDVPFTA True H1975_Epitope_Rep2 1048.48253877088 1048.4814499358602 37.649 2 0.19696357169895046 0.0006801564359802754 0.9438714419765777 ['ENSG00000103148|ENST00000611875|NPRL3'] 100653 5514 SLQSVAEER True NCI_RA007_Epitope_Rep5 1017.5090878718898 1017.50798993586 27.897 2 0.19696089155882246 0.0006801564359802754 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 105221 5079 STQSLSLQR True NCI_RA007_Epitope_Rep3 1018.54072235334 1018.53962993586 26.97 2 0.19694805983025115 0.0006801564359802754 0.9438714419765777 ['ENSG00000187479|ENST00000617612|C11orf96', 'nc|nan|Q7Z7L8|C11orf96'] 17286 16315 EHDGSLFQAV True PC9_epitope_Rep1 1101.50908787189 1101.50798993586 67.574 2 0.19693956912843918 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 136624 9932 YIDEQFERY True H1975_Epitope_Rep1 1261.5615173675699 1261.5604299358602 43.139 2 0.19693848799962657 0.0006801564359802754 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 89719 11604 REYQDLLNV True NCI_RA007_Epitope_Rep5 1148.5825871653199 1148.5814899358602 51.283 2 0.19693757620388214 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 28522 8137 FSHAQTVVL True NCI_RA007_Epitope_Rep5 1000.5341804209199 1000.53308993586 37.982 2 0.19693576106521452 0.0006801564359802754 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 49406 18329 KILPDLNTV True PC9_epitope_Rep1 1011.59644632431 1011.59534993586 75.291 2 0.1969355501608318 0.0006801564359802754 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 13812 10339 DQVANSAFVER True PC9_epitope_Rep5 1234.59421447818 1234.5931099358602 44.753 2 0.19693342958668433 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 137312 10332 YLHSQVVSV True PC9_epitope_Rep4 1030.5447451046198 1030.54364993586 47.434 2 0.19693004788437962 0.0006801564359802754 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 54593 10465 LADDSVRSL True PC9_epitope_Rep1 974.50327421546 974.50216993586 45.143 2 0.19692850275716728 0.0006801564359802754 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 113911 13361 TRIGLETSL True PC9_epitope_Rep4 988.55530978832 988.55420993586 59.296 2 0.19692280031210818 0.0006801564359802754 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 40894 16177 HVQPYIPSI True PC9_epitope_Rep4 1052.5654805492 1052.5643899358602 70.169 2 0.19691844533393887 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'ENST00000465154.1_1_9:130272232-130272589:-|nuORF'] 12379 10301 DKDDTQQIL True PC9_epitope_Rep1 1074.51931820242 1074.51822993586 44.507 2 0.19691808415655773 0.0006801564359802754 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 21083 10406 ERDPATYNI True PC9_epitope_Rep3 1077.5090878718902 1077.50798993586 44.966 2 0.19691802094592753 0.0006801564359802754 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 60634 6616 LITEDVQGK True PC9_epitope_Rep2 1001.5393253710098 1001.53822993586 30.859 2 0.19690484738269975 0.0006801564359802754 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF'] 139201 19611 YSVDRLYEL True PC9_epitope_Rep3 1156.5764391557198 1156.57534993586 80.67 2 0.19689491294352685 0.0006801564359802754 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 31639 6588 GEHANDYAEIA True H1975_Epitope_Rep2 1188.50473076744 1188.50362993586 30.251 2 0.19688372705508558 0.0006801564359802754 0.9438714419765777 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 29480 16176 FVIETARQL True PC9_epitope_Rep1 1075.6025943339098 1075.6014899358602 67.035 2 0.1968795567960887 0.0006801564359802754 0.9438714419765777 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2'] 42274 9807 IEIETPEQA True H1975_Epitope_Rep3 1028.5026055091198 1028.5015099358602 42.749 2 0.19685704353843156 0.0006801564359802754 0.9438714419765777 ['ENSG00000154767|ENST00000285021|XPC', 'ENST00000455144.6_1_3:14206267-14209863:-|nuORF'] 41169 21756 HYTYILEVF True PC9_epitope_Rep1 1183.5913609438696 1183.59026993586 88.518 2 0.19685390558083035 0.0006801564359802754 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 76611 19462 NTFTKLITV True PC9_epitope_Rep5 1035.59644632431 1035.5953499358602 79.913 2 0.19685159731855184 0.0006801564359802754 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB'] 110164 8982 TIDEHDAII True H1975_Epitope_Rep1 1025.5029398622898 1025.50184993586 39.454 2 0.1968476801246886 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152558|Q8N131-2|TMEM123', 'ENSG00000152558|ENST00000398136|TMEM123'] 89451 8428 REQDLPLAEA True H1975_Epitope_Rep3 1140.5775017848798 1140.57640993586 37.402 2 0.19684208180286616 0.0006801564359802754 0.9438714419765777 ['ENSG00000169895|ENST00000380155|SYAP1'] 113012 8876 TPTLVEVSR True PC9_epitope_Rep6 1000.55530978832 1000.55420993586 44.08 2 0.19683999942536012 0.0006801564359802754 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 135276 12462 YAYRDAVFL True H1975_Epitope_Rep3 1116.56039516876 1116.55928993586 53.128 2 0.19683938840099194 0.0006801564359802754 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000525495.6_2_17:45219385-45266538:-|nuORF', 'ENST00000528147.1_1_17:45258889-45266538:-|nuORF'] 132306 12844 VYLPLTSHI True NCI_RA007_Epitope_Rep4 1041.58588164061 1041.58478993586 56.486 2 0.19683840203111688 0.0006801564359802754 0.9438714419765777 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 120423 22555 VFTEVANLF True PC9_epitope_Rep5 1038.53859709502 1038.53750993586 91.761 2 0.19683228756993604 0.0006801564359802754 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 91636 16577 RPFGGLIRDV True PC9_epitope_Rep5 1128.64037682496 1128.63874490379 68.769 3 0.19683209205228067 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 21069 10879 ERDMSNVSL True PC9_epitope_Rep3 1049.48115887189 1049.48006993586 46.827 2 0.19682658999454616 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 75681 15644 NQTPVTLQV True PC9_epitope_Rep4 998.5396597241801 998.53911496793 68.102 1 0.1968220197542746 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 14950 9715 DYQALRTSI True NCI_RA007_Epitope_Rep3 1065.54547338061 1065.54436993586 45.286 2 0.19681728699846127 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 129129 4900 VTDALNATR True NCI_RA007_Epitope_Rep2 959.50360856863 959.50250993586 23.682 2 0.19681506331940252 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 30538 18545 GAIPRLVQL True PC9_epitope_Rep2 965.6022004110898 965.60110993586 76.685 2 0.196812606541903 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 1444 13527 AEEIPLKILA True H1975_Epitope_Rep2 1095.6539612004299 1095.65286993586 57.168 2 0.19680868752028993 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'ENST00000435000.2_1_1:146523151-146523364:+|nuORF', 'ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 69055 11187 LVIIEGDLER True H1975_Epitope_Rep1 1155.6499384491499 1155.6488499358602 47.999 2 0.1968045238806604 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF'] 89344 8853 REMEENFAV True H1975_Epitope_Rep1 1123.49680893603 1123.49570993586 38.975 2 0.19679978836501635 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 24379 7628 FAEHNDLQY True H1975_Epitope_Rep3 1135.4934378077498 1135.4923499358601 34.323 2 0.19679478651060214 0.0006801564359802754 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 74041 20716 NHSFMPIVL True PC9_epitope_Rep3 1056.54263692964 1056.5415299358601 84.958 2 0.1967893641091576 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 53365 15782 KTYEAALETI True PC9_epitope_Rep5 1137.5917548666898 1137.59064993586 65.699 2 0.19678866905673995 0.0006801564359802754 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 77355 22308 NYLLYVSNF True PC9_epitope_Rep2 1131.5600608155898 1131.5589699358602 91.286 2 0.19678157462514845 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 6987 6053 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep5 935.4348606187698 935.43431496793 29.965 1 0.19678079348221536 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 64549 18462 LRDGQILEL True PC9_epitope_Rep1 1055.59750895347 1055.59640993586 75.805 2 0.19677287139461203 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 133236 12358 WEEEFIERC True H1975_Epitope_Rep1 1239.5230236838697 1239.52192993586 52.566 2 0.19676781209919414 0.0006801564359802754 0.9438714419765777 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 2371 10834 AEQFRLEQI True H1975_Epitope_Rep1 1132.5876725457597 1132.58656993586 46.634 2 0.19676582002412404 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185104|Q9UNN5-2|FAF1', 'ENSG00000185104|ENST00000396153|FAF1'] 109855 16486 THMELYSQL True PC9_epitope_Rep3 1120.52229540788 1120.52118993586 68.55 2 0.19676039134804477 0.0006801564359802754 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 21477 5407 ERQPGAASL True PC9_epitope_Rep3 927.4773938207899 927.47628993586 25.871 2 0.19675984324072157 0.0006801564359802754 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 85005 10559 QIFNGTFVK True NCI_RA007_Epitope_Rep1 1052.5654805492 1052.5643899358602 45.057 2 0.1967561293894981 0.0006801564359802754 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 23737 19998 EYIPKWEQF True PC9_epitope_Rep3 1238.5971746003 1238.5960699358602 82.168 2 0.1967540339734277 0.0006801564359802754 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 83251 9265 QADPTKLEL True NCI_RA007_Epitope_Rep3 1013.5393253710099 1013.53822993586 43.552 2 0.1967538231562398 0.0006801564359802754 0.9438714419765777 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000523219.1_1_5:159833399-159834623:-|nuORF', 'ENST00000520841.1_1_5:159833399-159835410:-|nuORF'] 14898 15557 DYKESFNTI True PC9_epitope_Rep3 1115.5135045459901 1115.5124099358602 64.988 2 0.19674475706024994 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 29642 19962 FVLPVATQI True PC9_epitope_Rep6 986.58006798418 986.57896993586 89.447 2 0.19674288757686387 0.0006801564359802754 0.9438714419765777 ['ENSG00000111678|ENST00000229281|C12orf57'] 71566 7807 M[Oxidation]LDSHEELY True H1975_Epitope_Rep3 1151.48049054599 1151.4793899358601 35.012 2 0.1967398062830641 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 8324 4788 ATLNVSTTR True NCI_RA007_Epitope_Rep4 961.5192586327701 961.51816993586 24.852 2 0.1967371771488403 0.0006801564359802754 0.9438714419765777 ['ENST00000460846.1_1_13:111557570-111567134:-|nuORF', 'nc|ENSG00000088448|Q9NXR5-2|ANKRD10', 'ENSG00000088448|ENST00000267339|ANKRD10'] 2365 10007 AEQFKLIQA True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 43.481 2 0.19673655230404932 0.0006801564359802754 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 71295 12900 M[Oxidation]HAETAFESL True PC9_epitope_Rep2 1150.4964749633 1150.49536993586 54.918 2 0.1967360753037967 0.0006801564359802754 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 84577 18022 QHDFTSQIF True PC9_epitope_Rep5 1121.51417325233 1121.5130699358601 74.339 2 0.19673319504471054 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 28729 19725 FSWEGAFQHV True PC9_epitope_Rep4 1206.54580773378 1206.54470993586 83.995 2 0.19673213690146846 0.0006801564359802754 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 25655 12382 FEYILSHVA True H1975_Epitope_Rep2 1077.5494961318898 1077.54838993586 52.714 2 0.1967289075324473 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8'] 87885 20226 QVLPHLLEV True PC9_epitope_Rep5 1046.6124307416198 1046.61132993586 82.846 2 0.19672841165024438 0.0006801564359802754 0.9438714419765777 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 136831 22084 YIVDLLTHL True PC9_epitope_Rep2 1085.61209638845 1085.61098993586 90.418 2 0.19671803512076474 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2', 'GFOD2|p.V233Cfs*3|1|0.17|ENSG00000141098|chr16:67675617-67675618|-/C|frameshift_variant'] 35399 13016 GTDELRLLY True H1975_Epitope_Rep2 1078.56587447202 1078.56476993586 55.185 2 0.19670374817288175 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 34515 6612 GQDVGRYQV True PC9_epitope_Rep6 1020.49885754136 1020.49776993586 34.145 2 0.1966988626651244 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 138132 20097 YQLDPKFITSI True PC9_epitope_Rep4 1323.7074533252699 1323.70634993586 85.435 2 0.19669549609977416 0.0006801564359802754 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM'] 86630 7042 QREAEQSNVAL True PC9_epitope_Rep5 1243.61567819875 1243.61458993586 32.054 2 0.19669287449728706 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 42785 16580 IFIDPGYQTF True NCI_RA007_Epitope_Rep4 1199.58627556343 1199.5851699358602 71.875 2 0.19668641982204857 0.0006801564359802754 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 116599 17868 TYGEIFEKF True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 81.357 2 0.19668098940061504 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 107315 11730 SYREDPIVY True PC9_epitope_Rep4 1140.5451390274397 1140.5440499358601 52.881 2 0.19667993723586943 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 124778 19035 VLKVFLENV True PC9_epitope_Rep4 1059.63283183303 1059.6317299358602 81.307 2 0.19667804694957594 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 1475 13266 [Acetylation]-AEELVLER True H1975_Epitope_Rep1 999.5236756231699 999.52256993586 56.126 2 0.19667337620360648 0.0006801564359802754 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 23980 17723 EYPDRIMNTF True PC9_epitope_Rep4 1284.5808729131597 1284.5797699358602 76.195 2 0.19667253899582696 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 94113 13002 RWFDKSFTF True NCI_RA007_Epitope_Rep3 1232.59784330664 1232.59674993586 58.416 2 0.19667195364080978 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 94502 14776 RYIANTVEL True PC9_epitope_Rep3 1077.58185888933 1077.5807699358602 61.972 2 0.19667125132802363 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 21584 4554 ERSGVNSEL True PC9_epitope_Rep4 989.47778774361 989.47668993586 24.014 2 0.19667119710453768 0.0006801564359802754 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 93650 18242 RTFDETVSTYV True PC9_epitope_Rep5 1316.62484590012 1316.6237499358601 75.182 2 0.19666996196036876 0.0006801564359802754 0.9438714419765777 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 88347 19526 QYLTFKPQTF True PC9_epitope_Rep1 1271.6550238295897 1271.65392993586 79.927 2 0.19665993877029228 0.0006801564359802754 0.9438714419765777 ['ENSG00000109586|ENST00000265000|GALNT7'] 119129 7583 VEILANDQGNR True PC9_epitope_Rep3 1227.6207635791898 1227.6196699358602 34.167 2 0.19665807843855557 0.0006801564359802754 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 25848 19557 FGFVTFDDHD True PC9_epitope_Rep4 1198.4931034545798 1198.49200993586 83.349 2 0.19665622306867844 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 116662 17059 TYIPVPAKI True PC9_epitope_Rep1 1000.5957180483199 1000.59462993586 70.443 2 0.19664154970578474 0.0006801564359802754 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 136538 14298 YHSDIVQSL True PC9_epitope_Rep1 1060.5189242796 1060.5178299358602 59.821 2 0.19664087275891431 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31'] 84414 14162 QGFQLTHSL True PC9_epitope_Rep4 1029.5243440132099 1029.5232499358601 62.379 2 0.19663852742539234 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 101708 5906 SPGLQKEAV True PC9_epitope_Rep3 927.5025459394699 927.50144993586 27.779 2 0.19663192734643967 0.0006801564359802754 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 104843 8224 STELNHLGY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 36.587 2 0.1966282149488019 0.0006801564359802754 0.9438714419765777 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 88293 18443 QYILFPLRF True NCI_RA007_Epitope_Rep5 1195.67536535135 1195.6742699358601 77.764 2 0.19662805576526532 0.0006801564359802754 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 72289 4043 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 20.631 2 0.19662589580741752 0.0006801564359802754 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 7108 4906 AQYEDIAQK True NCI_RA007_Epitope_Rep4 1064.5138388991597 1064.51274993586 25.329 2 0.1966232552922409 0.0006801564359802754 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 22351 11607 ETELISTTANY True H1975_Epitope_Rep2 1240.5823123818 1240.5812099358602 49.714 2 0.1966229297297445 0.0006801564359802754 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 117630 10851 VAIEHLDKI True PC9_epitope_Rep2 1036.59169529704 1036.5905899358602 47.055 2 0.19662050761183786 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 57220 10357 LEEYGPELHVA True H1975_Epitope_Rep2 1255.60846755999 1255.60736993586 44.846 2 0.19661561013902198 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 68806 6026 LVDQTTGLSR True NCI_RA007_Epitope_Rep1 1088.5825871653199 1088.5814899358602 27.481 2 0.19661395926424477 0.0006801564359802754 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 89850 13380 RFLNDPGHLLW True NCI_RA007_Epitope_Rep3 1366.7146043943799 1366.71295490379 59.901 3 0.19661093847401964 0.0006801564359802754 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 86674 17695 QRIDEFEAL True PC9_epitope_Rep1 1119.5560380643099 1119.5549499358601 72.859 2 0.1966080948181795 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 140595 16991 YYLTPDGQRF True PC9_epitope_Rep3 1258.59823722946 1258.5971499358602 70.516 2 0.1965942749423507 0.0006801564359802754 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 112305 7939 TMDNPTTTQY True H1975_Epitope_Rep2 1170.48630382198 1170.4852099358602 35.485 2 0.19659165502226983 0.0006801564359802754 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 5120 23430 ALMDLLLRL True PC9_epitope_Rep1 1056.63653731448 1056.6354299358602 94.908 2 0.19658315019963243 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2'] 107023 15046 SYLNSVQRL True PC9_epitope_Rep3 1078.5771078620598 1078.5760099358602 63.005 2 0.19657748173154946 0.0006801564359802754 0.9438714419765777 ['ENSG00000136243|ENST00000258742|NUP42', 'nc|ENSG00000136243|O15504-2|NUP42'] 107344 19222 SYRQVAFDF True PC9_epitope_Rep3 1131.5349086969097 1131.53380993586 79.157 2 0.19656916444454411 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 53296 15039 KTLEGEFSV True PC9_epitope_Rep3 1008.5127762699999 1008.51166993586 62.976 2 0.19656466827106614 0.0006801564359802754 0.9438714419765777 ['ENSG00000100811|ENST00000262238|YY1', 'ENSG00000230797|ENST00000429584|YY2'] 64075 11162 LQDYFDGNLK True NCI_RA007_Epitope_Rep1 1211.58225281215 1211.5811499358601 47.415 2 0.19656321603361085 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 9922 9258 AYPHNLM[Oxidation]TF True NCI_RA007_Epitope_Rep4 1108.5011664209198 1108.5000699358602 42.462 2 0.19656235065853753 0.0006801564359802754 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 48608 5358 KEIESIVKA True H1975_Epitope_Rep3 1015.5913609438699 1015.59026993586 25.674 2 0.19656028678724113 0.0006801564359802754 0.9438714419765777 ['ENSG00000100209|ENST00000216027|HSCB'] 103658 19589 SRDPIIFSV True PC9_epitope_Rep1 1032.56039516876 1032.55928993586 80.176 2 0.19655990678574922 0.0006801564359802754 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000565049.1_1_16:33499109-33500962:-|nuORF', 'ENST00000554269.1_1_15:20362738-20365460:+|nuORF'] 55976 13285 LDIDSPPITAR True PC9_epitope_Rep6 1196.6401020414398 1196.63900993586 62.753 2 0.19655868956725409 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 133278 9325 WEIENNPTVKA True H1975_Epitope_Rep3 1299.6459156978701 1299.6448099358602 40.865 2 0.1965559384084012 0.0006801564359802754 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 88794 8869 RDQIVTVSV True H1975_Epitope_Rep2 1015.56620882519 1015.56510993586 39.083 2 0.1965508732580506 0.0006801564359802754 0.9438714419765777 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 35351 2608 GTADVHFER True NCI_RA007_Epitope_Rep3 1030.48320747722 1030.48210993586 14.729 2 0.19653617274893054 0.0006801564359802754 0.9438714419765777 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 42087 15924 IEEIKDFLLTA True H1975_Epitope_Rep3 1290.7071189721 1290.7060299358602 66.702 2 0.19653171546287576 0.0006801564359802754 0.9438714419765777 ['ENSG00000172809|ENST00000311111|RPL38', 'ENST00000529123.2_1_17:72199871-72200367:+|nuORF', 'ENST00000530646.1_1_17:72199871-72200367:+|nuORF'] 8146 6443 ATFGTQVVEK True NCI_RA007_Epitope_Rep5 1078.56587447202 1078.56476993586 31.451 2 0.19651429958529104 0.0006801564359802754 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'C3|p.K263Rfs*40|2|0.22|ENSG00000125730|chr19:6713497-6713497|C/-|frameshift_variant'] 28169 13674 FRMTDQEAI True PC9_epitope_Rep5 1109.5175443806097 1109.51644993586 57.622 2 0.19651328286634034 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 61275 10049 LLDTAQRALY True H1975_Epitope_Rep1 1162.6346227381798 1162.63352993586 43.593 2 0.19651050460677774 0.0006801564359802754 0.9438714419765777 ['ENSG00000249471|ENST00000336614|ZNF324B', 'ENSG00000083812|ENST00000196482|ZNF324'] 130996 19797 VVLEEIPKL True PC9_epitope_Rep5 1038.6324974798597 1038.6314099358601 81.194 2 0.19650251974900915 0.0006801564359802754 0.9438714419765777 ['ENSG00000116266|ENST00000370008|STXBP3'] 2895 7349 AEYVVQQEGA True H1975_Epitope_Rep2 1092.50875351872 1092.5076499358602 33.208 2 0.1965004602969285 0.0006801564359802754 0.9438714419765777 ['ENSG00000197601|ENST00000354817|FAR1', 'ENST00000524933.1_1_11:13716477-13732426:+|nuORF'] 138219 16328 YQTEIGQTL True PC9_epitope_Rep1 1051.51858992643 1051.51807496793 67.624 1 0.19649580313192933 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 17337 4761 EHDPVGQM[Oxidation]V True PC9_epitope_Rep4 1026.4440454676198 1026.44294993586 24.881 2 0.19649543637271996 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 94141 20453 RWFQPAIPSW True PC9_epitope_Rep4 1286.6560268890996 1286.65492993586 86.817 2 0.1964942764941355 0.0006801564359802754 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 76346 6561 NSEPEEVIPSR True H1975_Epitope_Rep1 1255.6044448087098 1255.60334993586 30.294 2 0.19649372143935098 0.0006801564359802754 0.9438714419765777 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000469100.5_1_1:33241584-33246798:-|nuORF', 'ENST00000487404.5_1_1:33241584-33248146:-|nuORF'] 87400 11365 QTDPVTLQY True H1975_Epitope_Rep2 1063.51858992643 1063.51807496793 48.764 1 0.19649064883863462 0.0006801564359802754 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 81764 2756 PSDPRYHEVHY True H1975_Epitope_Rep2 1398.63166261606 1398.63001490379 14.629 3 0.19648038693285183 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 33448 11431 GLGLDDALEPR True H1975_Epitope_Rep3 1154.59315184902 1154.5920499358601 49.087 2 0.19647946212952286 0.0006801564359802754 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'ENST00000594017.5_1_19:49497156-49513425:+|nuORF'] 72731 19614 MYSDVWKQL True PC9_epitope_Rep2 1168.5586809166 1168.55758993586 80.83 2 0.19647874349408312 0.0006801564359802754 0.9438714419765777 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 4798 15307 ALELDSNLYR True PC9_epitope_Rep4 1192.60880191316 1192.6077099358602 66.812 2 0.19647649080267163 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 9103 4345 AVLEKQDISDK True NCI_RA007_Epitope_Rep4 1244.66123140884 1244.65957490379 23.06 3 0.19647625259157395 0.0006801564359802754 0.9438714419765777 ['ENSG00000135932|ENST00000258418|CAB39'] 22154 12094 ESYSVYVYK True PC9_epitope_Rep4 1136.5389910178399 1136.5378899358602 54.324 2 0.19647453045413457 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 103399 14371 SQWSLQHEI True PC9_epitope_Rep4 1126.54072235334 1126.5396299358601 63.186 2 0.19646861226786086 0.0006801564359802754 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L'] 139289 8220 YTDKIMTY True H1975_Epitope_Rep1 1033.47903361357 1033.4779299358602 36.562 2 0.19646559609192585 0.0006801564359802754 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 53940 6080 KYISKPENL True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 28.78 2 0.1964637635785939 0.0006801564359802754 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 83028 9049 PYKVTQDEL True PC9_epitope_Rep6 1091.54989005471 1091.5487899358602 44.862 2 0.1964609354251033 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 48853 7201 KESEMNVIAA True H1975_Epitope_Rep3 1090.5328600915798 1090.5317699358602 32.674 2 0.1964583107851767 0.0006801564359802754 0.9438714419765777 ['ENSG00000148411|ENST00000277554|NACC2'] 41157 19869 HYSENMFSF True PC9_epitope_Rep3 1160.4596951513201 1160.4585899358601 81.663 2 0.19645670384426425 0.0006801564359802754 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 137984 12066 YQAEHLLQT True PC9_epitope_Rep5 1101.5454733806098 1101.54436993586 51.407 2 0.1964541946286756 0.0006801564359802754 0.9438714419765777 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 105150 4952 STLTYRMTK True NCI_RA007_Epitope_Rep4 1099.5695799534699 1099.56848993586 25.513 2 0.19645116585062367 0.0006801564359802754 0.9438714419765777 ['ENST00000446662.5_1_16:22466144-22470768:+|nuORF', 'ENST00000522841.6_1_16:21490806-21495758:-|nuORF'] 43442 11270 IHSSETLTL True PC9_epitope_Rep2 999.52367530687 999.52256993586 48.676 2 0.19645100307596952 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 68825 7978 LVDTAGQDEY True H1975_Epitope_Rep2 1109.48768372097 1109.4865899358601 35.634 2 0.19644977779770165 0.0006801564359802754 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 17677 19409 EHSIATLLL True PC9_epitope_Rep4 995.56514619603 995.56404993586 82.767 2 0.19644719074007225 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 74277 4044 NIIHGSDSVK True NCI_RA007_Epitope_Rep2 1068.5563724174801 1068.55526993586 20.369 2 0.19644023296274268 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF'] 29394 12613 FVEWIPNNVK True NCI_RA007_Epitope_Rep2 1244.65535818276 1244.6542699358602 53.675 2 0.1964382500541523 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 123639 19701 VILPKFTAV True PC9_epitope_Rep1 986.6164534929 986.61534993586 80.605 2 0.19643543405998984 0.0006801564359802754 0.9438714419765777 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 47929 8009 IYYITGETK True H1975_Epitope_Rep3 1086.55972646242 1086.5586299358602 35.779 2 0.19643420872932066 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 77350 19536 NYLHLDYNF True PC9_epitope_Rep4 1197.5454733806098 1197.54436993586 83.266 2 0.19643051028846992 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 89043 5742 REEFLERAA True H1975_Epitope_Rep2 1119.5672714543498 1119.5661699358602 27.086 2 0.19642521702206928 0.0006801564359802754 0.9438714419765777 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1'] 77256 16551 NYIPRFWTF True NCI_RA007_Epitope_Rep3 1242.6185787512197 1242.61748993586 72.893 2 0.1964203157482307 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 90345 17084 RIIDVVYNA True PC9_epitope_Rep3 1061.58694426977 1061.58584993586 70.865 2 0.1964157516059952 0.0006801564359802754 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 72376 9572 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4684899358601 41.793 2 0.19641551777022997 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 109946 10047 THSFGNPSI True PC9_epitope_Rep1 958.45084471978 958.44974993586 43.514 2 0.19641532856968894 0.0006801564359802754 0.9438714419765777 ['ENSG00000145012|ENST00000617246|LPP', 'LPP|p.V101Dfs*24|1|0.13|ENSG00000145012|chr3:188484700-188484700|T/-|frameshift_variant'] 40095 17968 HRDFISVTL True PC9_epitope_Rep3 1086.5821932425 1086.58108993586 74.319 2 0.196414269622089 0.0006801564359802754 0.9438714419765777 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000545096.1_1_9:139981559-139982655:+|nuORF', 'MAN1B1|p.K129Nfs*49|1|0.31|ENSG00000177239|chr9:137088924-137088924|A/-|frameshift_variant'] 52677 6237 KQFQSPSTL True NCI_RA007_Epitope_Rep3 1034.5396597241797 1034.53856993586 31.538 2 0.1964126955480143 0.0006801564359802754 0.9438714419765777 ['ENSG00000177311|ENST00000321464|ZBTB38'] 24340 21737 FADPDDFTL True PC9_epitope_Rep1 1039.4498416602698 1039.4487499358602 88.443 2 0.19641139361702054 0.0006801564359802754 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 77228 17163 NYIEKVVAI True PC9_epitope_Rep4 1047.59644632431 1047.5953499358602 74.023 2 0.1964039441452517 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 72275 14485 MSDSYLPSYY True H1975_Epitope_Rep2 1224.5008912569601 1224.49978993586 60.876 2 0.19639382067877093 0.0006801564359802754 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 65809 7219 LSKDPNIVIAK True PC9_epitope_Rep2 1196.71287305888 1196.71123490379 33.156 3 0.19638300197784242 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 58226 13992 LESTPSPVVF True H1975_Epitope_Rep2 1074.55972646242 1074.5586299358602 58.969 2 0.19638187913179142 0.0006801564359802754 0.9438714419765777 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 83053 15557 PYLFHVVTF True NCI_RA007_Epitope_Rep3 1121.59096702105 1121.5898699358602 68.759 2 0.1963735323835742 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 118667 13594 VEAQLQELQVK True PC9_epitope_Rep5 1283.7085159544297 1283.7074099358601 57.314 2 0.19636745413219686 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 83038 20999 PYLDKFFTL True PC9_epitope_Rep4 1142.6011973515801 1142.60010993586 88.934 2 0.19636642588239228 0.0006801564359802754 0.9438714419765777 ['ENSG00000130158|ENST00000294618|DOCK6'] 97016 9380 SEVQYIQEA True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 41.043 2 0.19636584382941535 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 26183 22107 FHSEIEDFLL True PC9_epitope_Rep1 1248.60265390356 1248.60154993586 89.846 2 0.19636368194329445 0.0006801564359802754 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 132615 18636 VYPQYVIEY True PC9_epitope_Rep6 1172.57537652656 1172.57426993586 84.326 2 0.19636170843975428 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 77617 13696 NYVEKGFQI True PC9_epitope_Rep6 1096.5553097883198 1096.5542099358602 64.468 2 0.19635748599361827 0.0006801564359802754 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 137095 10252 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.53280993586 44.376 2 0.1963568297036125 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 21117 14490 ERDPSPWAV True PC9_epitope_Rep5 1055.50360856863 1055.5025099358602 60.736 2 0.19635575788383466 0.0006801564359802754 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 14748 16727 DVVLTQTPLSL True NCI_RA007_Epitope_Rep3 1184.6652541601197 1184.66414993586 73.631 2 0.19635158789089946 0.0006801564359802754 0.9438714419765777 ['CON__Q05B55'] 94871 14579 RYNPNLNTW True PC9_epitope_Rep3 1176.5676058075198 1176.56650993586 61.205 2 0.19634153267726867 0.0006801564359802754 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 105527 11132 SVDPHGFISY True H1975_Epitope_Rep1 1120.5189242796 1120.5178299358602 47.786 2 0.1963367533026733 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 109364 12600 TGISDVFAK True PC9_epitope_Rep6 936.4916469026 936.49054993586 59.919 2 0.19633603251848117 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 103602 16039 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.59957490379 66.508 3 0.196332805803816 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 53209 13319 KTDDLTMVLY True H1975_Epitope_Rep2 1197.59512599497 1197.5940299358601 56.362 2 0.19633051061347684 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 17652 10843 EHQSNGGALVL True PC9_epitope_Rep1 1123.5621860739097 1123.56108993586 46.594 2 0.19633005261137448 0.0006801564359802754 0.9438714419765777 ['ENSG00000081019|ENST00000261441|RSBN1', 'nc|ENSG00000081019|Q5VWQ0-4|RSBN1'] 135187 16714 YAVDAYFREA True PC9_epitope_Rep4 1203.55603806431 1203.5549499358601 72.26 2 0.19632588051734878 0.0006801564359802754 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 43400 9887 IHSENFQTL True PC9_epitope_Rep6 1087.5298233164701 1087.5287299358602 48.531 2 0.19632191240678679 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 71391 9564 MIEPRTLQY True H1975_Epitope_Rep3 1149.58523001761 1149.5841299358601 41.796 2 0.19631458042661187 0.0006801564359802754 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 84237 5183 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 25.009 2 0.19631372961250687 0.0006801564359802754 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 67349 5088 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 24.653 2 0.19630805861939485 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 23899 8279 EYMKHTRLF True PC9_epitope_Rep6 1223.6121134717898 1223.61046490379 41.455 3 0.1962907358288732 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 10927 14222 DAVLLVFANK True H1975_Epitope_Rep3 1088.62299542532 1088.62188993586 60.045 2 0.19628979926712892 0.0006801564359802754 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 65321 14155 LSELEAALQR True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 62.349 2 0.19627500564125186 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 22979 18082 EVIKELAQI True PC9_epitope_Rep3 1041.6070110080097 1041.6059099358602 74.75 2 0.19627321019192914 0.0006801564359802754 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 65049 6746 LSDKNIEQY True H1975_Epitope_Rep3 1108.540053647 1108.53894993586 30.901 2 0.19627227690455953 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 46797 7555 IVDKSGVVRV True PC9_epitope_Rep1 1070.64479349906 1070.64368993586 33.878 2 0.19627084992688149 0.0006801564359802754 0.9438714419765777 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000571079.1_1_17:7497531-7497639:-|nuORF', 'TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1'] 21692 17153 ERYFISHVL True PC9_epitope_Rep5 1162.61349337078 1162.6123899358602 71.001 2 0.19627073366245928 0.0006801564359802754 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 22150 9040 ESYSVYVYK True NCI_RA007_Epitope_Rep5 1136.5389910178399 1136.5378899358602 41.429 2 0.19626795125874905 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 41066 12932 HYKPTPLYF True PC9_epitope_Rep4 1164.59678067748 1164.59568993586 57.628 2 0.19626517188069728 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 106693 20804 SYANYFIRL True PC9_epitope_Rep1 1145.58694426977 1145.58584993586 84.848 2 0.1962651699729576 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 107531 11071 TADHNLLLY True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 47.548 2 0.19626263174668934 0.0006801564359802754 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 125597 17076 VMAPRALLL True PC9_epitope_Rep6 982.5997578829398 982.59866993586 78.251 2 0.1962608285768956 0.0006801564359802754 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 88297 22531 QYILFPLRF True PC9_epitope_Rep5 1195.67536535135 1195.6742699358601 91.67 2 0.19625964773566693 0.0006801564359802754 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 105658 4859 SVFQTTDTK True NCI_RA007_Epitope_Rep5 1025.5029398622898 1025.50184993586 25.381 2 0.19625868497360086 0.0006801564359802754 0.9438714419765777 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 28407 11156 FSDVNMQEY True H1975_Epitope_Rep1 1131.4542754177098 1131.45377496793 47.879 1 0.19624718481119705 0.0006801564359802754 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 40848 9840 HVLEEVQQV True PC9_epitope_Rep6 1079.56112344475 1079.56002993586 48.321 2 0.1962448499742354 0.0006801564359802754 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 21696 9347 ERYKEVAEL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 40.81 2 0.19624085607255237 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 31713 9081 GEIQEKLLSA True NCI_RA007_Epitope_Rep3 1086.5920892198599 1086.59098993586 42.807 2 0.19623834082991432 0.0006801564359802754 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 23400 19471 EVVERLLSV True PC9_epitope_Rep1 1042.60225998074 1042.60116993586 79.712 2 0.19623736148203616 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 40987 11557 HYDPTINKW True PC9_epitope_Rep1 1172.56145779792 1172.56036993586 49.333 2 0.19623202244276058 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 112594 6394 TPAQYDASELK True H1975_Epitope_Rep3 1221.58773211541 1221.5866299358602 29.573 2 0.1962186817711099 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 24244 15409 EYYDKHFTEF True PC9_epitope_Rep5 1377.5877321154096 1377.5866299358602 64.28 2 0.1962163645763077 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 89061 8693 REELFIVSK True NCI_RA007_Epitope_Rep2 1119.62880908175 1119.6277099358601 38.461 2 0.19621106449189984 0.0006801564359802754 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 10018 18850 AYTPFHAVL True PC9_epitope_Rep1 1017.5283667644899 1017.52726993586 77.29 2 0.19619032894572044 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 55179 6224 LAPEYEAAATR True H1975_Epitope_Rep3 1190.59315184902 1190.5920499358601 28.953 2 0.19618818589472475 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 116718 14832 TYKVISNEF True PC9_epitope_Rep1 1099.5549754351498 1099.5538699358601 61.87 2 0.1961872314811233 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 103110 18916 SQLPPLREIIL True PC9_epitope_Rep6 1277.77072228817 1277.7696299358602 85.405 2 0.1961872070759522 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 139178 5447 YSSSRSDLY True H1975_Epitope_Rep3 1076.47745339044 1076.47634993586 26.012 2 0.19618702409102065 0.0006801564359802754 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 84624 4832 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 26.094 2 0.19618639947301958 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 114485 8616 TSFDGSLIQK True NCI_RA007_Epitope_Rep4 1094.56078909158 1094.5596899358602 39.924 2 0.19618609968430734 0.0006801564359802754 0.9438714419765777 ['ZBTB33|p.H573Sfs*2|1|0.19|ENSG00000177485|chrX:120255129-120255130|-/T|frameshift_variant', 'ENSG00000177485|ENST00000557385|ZBTB33'] 103388 12759 SQVVQVVL True NCI_RA007_Epitope_Rep5 870.5174677276198 870.51636993586 55.749 2 0.19618576383395786 0.0006801564359802754 0.9438714419765777 ['KPNA3|p.N437Kfs*8|1|0.2|ENSG00000102753|chr13:49705682-49705683|-/T|frameshift_variant', 'ENSG00000102753|ENST00000261667|KPNA3'] 119528 6456 VEQVPDRAMEA True H1975_Epitope_Rep2 1243.58668656959 1243.58558993586 29.75 2 0.19617834409228527 0.0006801564359802754 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 114300 8423 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 39.078 2 0.19617138728581887 0.0006801564359802754 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 107042 21935 SYLPISPTF True PC9_epitope_Rep1 1023.52769805815 1023.5266099358599 89.19 2 0.19616073206761084 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 45050 5757 IQNPTMINK True NCI_RA007_Epitope_Rep5 1057.55901526977 1057.5579099358602 28.831 2 0.1961581410356461 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 35627 12554 GTLSGWILSK True NCI_RA007_Epitope_Rep3 1060.59169529704 1060.5905899358602 56.621 2 0.19615647858050406 0.0006801564359802754 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 41941 8208 IEAQLGDVRA True NCI_RA007_Epitope_Rep4 1070.5720224816198 1070.57092993586 38.358 2 0.19615348672030733 0.0006801564359802754 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'ENST00000405746.1_1_6:72295335-72295494:+|nuORF'] 87684 8373 QVDLNQQQY True H1975_Epitope_Rep2 1134.5305515924601 1134.5294499358602 37.159 2 0.19614963567338436 0.0006801564359802754 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 4729 18869 ALDVANKIGII True PC9_epitope_Rep4 1125.6757592741699 1125.67466993586 80.665 2 0.19614148052011618 0.0006801564359802754 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 106055 11306 SVLSPLLNK True NCI_RA007_Epitope_Rep1 969.5858816406101 969.58478993586 47.957 2 0.19613978855623312 0.0006801564359802754 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 42889 19633 IFTDLSSRF True PC9_epitope_Rep1 1084.55530978832 1084.5542099358602 80.343 2 0.19613683825186712 0.0006801564359802754 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 103337 21447 SQVEEELFSV True PC9_epitope_Rep1 1165.55028397753 1165.54918993586 87.334 2 0.19613465769380228 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 40103 8329 HRDGALTQL True PC9_epitope_Rep3 1009.53049202281 1009.52938993586 37.009 2 0.19610910293103928 0.0006801564359802754 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 75363 12786 NQDDSILKV True PC9_epitope_Rep2 1030.5294889632999 1030.52838993586 54.484 2 0.19609833729099735 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 83136 19647 PYRLIFEKF True PC9_epitope_Rep5 1211.6702799709099 1211.66863490379 80.628 3 0.19609526658638943 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 139120 7536 YSQADALKY True H1975_Epitope_Rep1 1057.50802524273 1057.5069299358602 33.981 2 0.1960932210775248 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108799|Q92800-5|EZH1', 'nc|ENSG00000108799|Q92800-4|EZH1', 'nc|ENSG00000106462|Q15910-5|EZH2', 'nc|ENSG00000108799|Q92800-3|EZH1', 'nc|ENSG00000106462|Q15910-3|EZH2', 'nc|ENSG00000106462|Q15910-4|EZH2', 'nc|ENSG00000106462|Q15910|EZH2', 'ENSG00000108799|ENST00000428826|EZH1', 'nc|ENSG00000108799|Q92800-2|EZH1', 'ENST00000586714.1_1_17:40854552-40854989:-|nuORF', 'ENST00000492143.5_1_7:148504740-148513906:-|nuORF', 'ENSG00000106462|ENST00000320356|EZH2', 'ENST00000431167.1_1_21:36972032-36972302:-|nuORF'] 45114 20008 IQTAVRLLL True PC9_epitope_Rep1 1025.6597152872098 1025.65860993586 81.789 2 0.1960827905351734 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC4|p.R93G|1|0.26|ENSG00000278588|chr6:26123628-26123628|T/C|missense_variant', 'H2BC4|p.E94D|1|0.3|ENSG00000278588|chr6:26123623-26123623|C/A|missense_variant', 'H2BC7|p.E94D|1|0.38|ENSG00000277224|chr6:26199840-26199840|G/C|missense_variant', 'H2BC21|p.P104L|1|0.5|ENSG00000184678|chr1:149886330-149886330|G/A|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 74121 11454 NHVTPPNVSL True PC9_epitope_Rep4 1076.56145779792 1076.56036993586 51.822 2 0.1960761509464319 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 127397 16803 VQQTVQDLFGR True PC9_epitope_Rep1 1289.67279915205 1289.67170993586 69.457 2 0.1960751358980306 0.0006801564359802754 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 70540 21279 LYTPVLIRF True PC9_epitope_Rep3 1120.66446631448 1120.6633699358601 87.145 2 0.19607137744761347 0.0006801564359802754 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 136623 9774 YIDEQFERY True H1975_Epitope_Rep1 1261.5615173675699 1261.5604299358602 42.524 2 0.19606830858059177 0.0006801564359802754 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 54006 11452 KYLEETNSL True PC9_epitope_Rep5 1095.5448046742702 1095.54370993586 49.048 2 0.19606348136750568 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 133526 16916 WHHTFYNEL True PC9_epitope_Rep3 1245.55670677065 1245.5550749037902 70.224 3 0.19606014367342667 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 72118 12091 MRDPTFVRL True PC9_epitope_Rep6 1133.60154878809 1133.59990490379 57.835 3 0.1960547631071601 0.0006801564359802754 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 71938 19268 MPTLPPPSV True PC9_epitope_Rep1 937.49428975489 937.49318993586 78.916 2 0.19605082666452725 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 26762 10057 FLDKSGLQGY True H1975_Epitope_Rep2 1126.56587447202 1126.56476993586 43.676 2 0.19605051960470551 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant'] 73268 5343 NEIKDSVVA True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 25.613 2 0.19605005441481899 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 28727 20436 FSWEGAFQHV True PC9_epitope_Rep2 1206.54580773378 1206.54470993586 84.034 2 0.19603717910309346 0.0006801564359802754 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 94080 15683 RVVDYLTKL True PC9_epitope_Rep4 1105.64954452633 1105.64844993586 68.252 2 0.19603348398363704 0.0006801564359802754 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 87398 11356 QTDPVTLQY True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 48.73 2 0.19603041359469994 0.0006801564359802754 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 109910 9902 THQDVHLGETL True PC9_epitope_Rep1 1248.6098645423199 1248.60820490379 42.945 3 0.19602646660843054 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 138413 12379 YRDPYTEQTI True PC9_epitope_Rep2 1284.59863115228 1284.5975299358602 52.926 2 0.19602082562692813 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 73970 14015 NHNIYITEV True PC9_epitope_Rep5 1101.54547338061 1101.54436993586 58.926 2 0.19602061719382363 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'AMBRA1|p.W132Cfs*22|1|0.22|ENSG00000110497|chr11:46545759-46545759|C/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 48947 13474 KEYFGIVSV True NCI_RA007_Epitope_Rep4 1040.5542471591598 1040.5531499358601 59.033 2 0.1960113349233002 0.0006801564359802754 0.9438714419765777 ['ENSG00000055211|ENST00000367419|GINM1'] 94548 19938 RYINNPLLI True PC9_epitope_Rep5 1114.6498788795 1114.6487899358601 81.746 2 0.19600837075589753 0.0006801564359802754 0.9438714419765777 ['TTLL5-RGS6|2|fusion', 'TTLL5-RGS6|5|fusion', 'TTLL5-RGS6|1|fusion', 'TTLL5-RGS6|8|fusion', 'TTLL5-RGS6|4|fusion', 'TTLL5-RGS6|6|fusion', 'TTLL5-RGS6|7|fusion', 'TTLL5-RGS6|3|fusion', 'ENSG00000119685|ENST00000298832|TTLL5', 'TTLL5|p.I678Sfs*12|1|0.11|ENSG00000119685|chr14:75771750-75771756|ATAGCAT/-|frameshift_variant', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 9472 15170 AVYDFFIGR True NCI_RA007_Epitope_Rep5 1086.5498304850598 1086.5487299358601 65.035 2 0.1960074115366062 0.0006801564359802754 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 138762 13516 YSDAFLNDSY True H1975_Epitope_Rep3 1193.48768372097 1193.4865899358601 57.268 2 0.19599842992228936 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 113239 8162 TQDTQPHYI True PC9_epitope_Rep5 1101.50908787189 1101.50798993586 36.336 2 0.1959923725354058 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 9740 9226 AYLDKSPQF True NCI_RA007_Epitope_Rep5 1067.52876068731 1067.52766993586 42.138 2 0.19599137981935436 0.0006801564359802754 0.9438714419765777 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000513447.1_1_5:54569247-54572159:-|nuORF', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 92141 8145 RQAPIPAEL True NCI_RA007_Epitope_Rep3 993.5607295219298 993.55962993586 39.151 2 0.19599055931589493 0.0006801564359802754 0.9438714419765777 ['ENSG00000169583|ENST00000494426|CLIC3'] 49015 7228 KFIDTTSKF True NCI_RA007_Epitope_Rep5 1085.57571087973 1085.57460993586 34.48 2 0.19598943459733392 0.0006801564359802754 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 135881 6504 YESERVYVA True H1975_Epitope_Rep2 1114.5294889633 1114.52838993586 29.934 2 0.195982319536867 0.0006801564359802754 0.9438714419765777 ['ENSG00000145391|ENST00000274031|SETD7'] 27762 21345 FQEEDFPAL True PC9_epitope_Rep1 1094.4920408254197 1094.49094993586 86.934 2 0.19597686467106293 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 125598 12299 VMAPRTLLL True H1975_Epitope_Rep1 1012.6103225666399 1012.60922993586 52.335 2 0.1959727718141965 0.0006801564359802754 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'HLA-A|p.A2P|1|0.42|ENSG00000206503|chr6:29942557-29942557|G/C|missense_variant', 'ENST00000463348.5_1_6:30227401-30227711:+|nuORF'] 37514 15351 GYIERPQLI True PC9_epitope_Rep4 1087.6025943339098 1087.6014899358602 66.98 2 0.1959718744311255 0.0006801564359802754 0.9438714419765777 ['ENSG00000164329|ENST00000453514|TENT2', 'nc|ENSG00000164329|Q6PIY7-2|TENT2'] 28815 7974 FTDGITRTY True H1975_Epitope_Rep2 1072.5189242796 1072.5178299358602 35.619 2 0.195970932542749 0.0006801564359802754 0.9438714419765777 ['ENST00000294309.7_2_11:68821527-68822650:+|nuORF'] 117416 10134 VADLVENSY True H1975_Epitope_Rep2 1008.4763907612801 1008.47587496793 43.979 1 0.19595947649108036 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 135222 14441 YAYDGKDYL True PC9_epitope_Rep1 1106.4920408254197 1106.49094993586 60.371 2 0.19595622804771595 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 14093 14197 DSDSDQLFY True H1975_Epitope_Rep2 1088.42983449168 1088.42872993586 59.76 2 0.19595488623898388 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 117217 16563 TYTSYLDKF True PC9_epitope_Rep6 1136.5389910178399 1136.5378899358602 76.148 2 0.19595409176815137 0.0006801564359802754 0.9438714419765777 ['ENSG00000069956|ENST00000261845|MAPK6'] 9869 20935 AYMPHTFFI True PC9_epitope_Rep1 1125.53173789277 1125.53064993586 85.348 2 0.19595054148156882 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 114007 6536 TRLQQAQAL True PC9_epitope_Rep4 1027.5774422152297 1027.5763499358602 32.268 2 0.19594798965512136 0.0006801564359802754 0.9438714419765777 ['ENSG00000267368|ENST00000340457|UPK3BL1'] 105175 11601 STMYPGLPSRL True NCI_RA007_Epitope_Rep3 1220.6223438023198 1220.62124993586 52.757 2 0.1959476954247473 0.0006801564359802754 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 10094 21038 AYVLNIVRF True PC9_epitope_Rep1 1093.62841515893 1093.62730993586 85.753 2 0.19594334452741313 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 101799 9890 SPIENIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 48.542 2 0.19594154315527604 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 1874 6904 AEIHVPEEQA True H1975_Epitope_Rep1 1121.53530261973 1121.5342099358602 31.597 2 0.19593489855586388 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C'] 17639 12217 EHQAVLQSL True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 51.98 2 0.19593168610111794 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'nc|ENSG00000137171|Q9NSK0-2|KLC4'] 103780 10079 SRFPQGAQL True PC9_epitope_Rep4 1002.5246783663797 1002.52358993586 46.438 2 0.195924633049471 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 28884 13258 FTDVNSILRY True H1975_Epitope_Rep1 1226.62953735774 1226.62844993586 56.096 2 0.1959181890153459 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 60371 19278 LIIDENGVHEL True PC9_epitope_Rep3 1250.65066672514 1250.6495699358602 79.374 2 0.19591771836897476 0.0006801564359802754 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 6616 19348 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 79.468 2 0.19591438271603503 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 23649 20886 EYGKFFVTL True PC9_epitope_Rep3 1102.5698972233 1102.5688099358601 85.612 2 0.19591186065788554 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 129410 5804 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.52347496793 27.314 1 0.1959100369582417 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 40839 12438 HVLEEVQQV True PC9_epitope_Rep1 1079.56112344475 1079.56002993586 52.707 2 0.19590723991471354 0.0006801564359802754 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 75676 16459 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53856993586 68.551 2 0.19589970752670224 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 84096 9098 QEQFNSIAA True H1975_Epitope_Rep2 1006.4719740871798 1006.47147496793 39.946 1 0.19589871197755945 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 40053 11112 HQYDGLVEL True NCI_RA007_Epitope_Rep3 1072.5189242795998 1072.5178299358602 50.81 2 0.19589153775229529 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 49409 18262 KILPDLNTV True PC9_epitope_Rep5 1011.59644632431 1011.59534993586 75.259 2 0.19588762414023367 0.0006801564359802754 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 116668 16885 TYIPVPAKI True PC9_epitope_Rep5 1000.5957180483199 1000.59462993586 69.96 2 0.19588175553869488 0.0006801564359802754 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 14675 7439 DVNQQEFVR True NCI_RA007_Epitope_Rep1 1133.5465360097699 1133.54542993586 32.934 2 0.1958807137114593 0.0006801564359802754 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 46485 20083 ITPDEFHFV True PC9_epitope_Rep5 1103.5287606873098 1103.52766993586 82.299 2 0.19587887605799284 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF', 'nc|ENSG00000153827|Q14669-4|TRIP12'] 107275 19943 SYQKVIELF True PC9_epitope_Rep2 1125.6070110080097 1125.6059099358602 82.108 2 0.19587765555741654 0.0006801564359802754 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 72413 11237 MTELYDYPKY True H1975_Epitope_Rep2 1321.5900406145297 1321.58894993586 48.265 2 0.19587444354958153 0.0006801564359802754 0.9438714419765777 ['ENSG00000085377|ENST00000652536|PREP', 'PREP-SIM1|1|fusion'] 75446 9429 NQIDHEVTV True PC9_epitope_Rep1 1053.50908787189 1053.50798993586 41.126 2 0.1958707930777172 0.0006801564359802754 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 83170 11001 PYTKVEESF True PC9_epitope_Rep2 1098.5233409536997 1098.5222499358601 47.636 2 0.19586321427623085 0.0006801564359802754 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 10044 7732 AYVEKVERL True PC9_epitope_Rep4 1105.6131590176099 1105.61206993586 37.131 2 0.19584814550448199 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 38549 12727 HHFEGAQIL True PC9_epitope_Rep1 1050.5246783663797 1050.5235899358602 53.828 2 0.19584667767090058 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 20688 21138 EQIKDIFYI True PC9_epitope_Rep5 1167.6175756917098 1167.61646993586 86.366 2 0.19583906077161442 0.0006801564359802754 0.9438714419765777 ['ENSG00000164902|ENST00000297540|PHAX'] 39681 8983 HPTEDLVVSA True PC9_epitope_Rep6 1066.5294889632999 1066.52838993586 44.575 2 0.19583748083945188 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 23870 20141 EYMEHVYLI True PC9_epitope_Rep3 1195.5583465634297 1195.55724993586 82.726 2 0.19583280529293187 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 65439 11056 LSEWQKELY True H1975_Epitope_Rep1 1194.5920892198599 1194.59098993586 47.488 2 0.19582386453337988 0.0006801564359802754 0.9438714419765777 ['ENSG00000196453|ENST00000247930|ZNF777'] 90135 12969 RGVDLDQLLD True NCI_RA007_Epitope_Rep3 1142.59315184902 1142.5920499358601 58.287 2 0.19581627411828223 0.0006801564359802754 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000586686.6_1_19:1438424-1438889:+|nuORF', 'ENST00000591032.1_1_19:1438424-1439963:+|nuORF'] 73762 14735 NHASLISAL True PC9_epitope_Rep2 924.50288029264 924.50178993586 61.944 2 0.1958126995277542 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 14841 11094 DYETATLSEIK True NCI_RA007_Epitope_Rep2 1268.61361251008 1268.61250993586 47.734 2 0.1958092152826093 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 11869 17894 DHNLLLYEA True PC9_epitope_Rep4 1086.53457434374 1086.53346993586 76.867 2 0.1957990539488802 0.0006801564359802754 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 75635 16597 NQSEKIFSL True PC9_epitope_Rep1 1064.55022440788 1064.54912993586 68.664 2 0.19578617351029676 0.0006801564359802754 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426'] 52615 6469 KQDGTIQNL True PC9_epitope_Rep2 1015.52982331647 1015.52872993586 30.297 2 0.19578233946451096 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'PDE4DIP|p.R930Sfs*80|1|0.35|ENSG00000178104|chr1:148981371-148981371|G/-|frameshift_variant', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 107407 19560 SYTRLFSNF True PC9_epitope_Rep2 1133.5505587610498 1133.54946993586 80.619 2 0.1957792891305045 0.0006801564359802754 0.9438714419765777 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 52648 19834 KQFDDVLIYL True PC9_epitope_Rep6 1252.6703395405598 1252.66924993586 88.953 2 0.19577854452293794 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105948|A0AVF1-2|IFT56', 'nc|ENSG00000105948|A0AVF1-3|IFT56', 'ENSG00000105948|ENST00000464848|TTC26'] 71943 19214 MPTLPPPSV True PC9_epitope_Rep3 937.49428975489 937.49318993586 79.126 2 0.19576474481646425 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 74590 13548 NLDPLTETY True H1975_Epitope_Rep1 1064.50260550912 1064.5015099358602 57.236 2 0.195763391385063 0.0006801564359802754 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 39822 17137 HQFESSFEL True PC9_epitope_Rep2 1122.4981888350198 1122.49708993586 71.166 2 0.19576012011520588 0.0006801564359802754 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 14731 11700 DVTGAEALLER True H1975_Epitope_Rep1 1172.60371653272 1172.60260993586 49.995 2 0.19575812033726467 0.0006801564359802754 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 21059 5727 ERDM[Oxidation]SNVSL True PC9_epitope_Rep4 1065.47607387189 1065.4749699358601 28.853 2 0.19575623978549878 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 54329 17274 KYQDVYVEL True PC9_epitope_Rep5 1155.5811901829898 1155.58008993586 71.452 2 0.19574935015904235 0.0006801564359802754 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 82094 8826 PTAEDNLEY True H1975_Epitope_Rep2 1050.4505699362599 1050.4494699358602 38.916 2 0.19574747711391055 0.0006801564359802754 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL'] 54384 9964 KYQKGFSLW True NCI_RA007_Epitope_Rep3 1155.6076797143498 1155.60604490379 46.278 3 0.19573962605430792 0.0006801564359802754 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 54135 16937 KYNANFVTF True PC9_epitope_Rep2 1102.54474510462 1102.54364993586 70.39 2 0.19573782690279165 0.0006801564359802754 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 129910 6977 VTLTSEEEAR True PC9_epitope_Rep3 1133.5564319871298 1133.55532993586 31.849 2 0.195723324821347 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 136657 7350 YIDQEELNK True PC9_epitope_Rep2 1150.5506183307 1150.5495299358602 33.652 2 0.1957232170009473 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 83719 5799 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.4648849679301 27.331 1 0.19572250416358003 0.0006801564359802754 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 93695 16817 RTLETLIRL True PC9_epitope_Rep2 1113.6869926642098 1113.6858899358601 69.935 2 0.19571956513895333 0.0006801564359802754 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 89754 6508 REYWNEQSA True H1975_Epitope_Rep3 1181.51015050105 1181.50904993586 30.003 2 0.19571052779258036 0.0006801564359802754 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 114208 20269 TRVDTILEF True PC9_epitope_Rep5 1092.5815245361598 1092.5804299358601 83.016 2 0.19570997015854733 0.0006801564359802754 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 72248 20151 MRYVASYLL True PC9_epitope_Rep5 1114.5845017416198 1114.5834099358601 82.559 2 0.1957071108928683 0.0006801564359802754 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 4170 5869 AIAQAESLRYK True NCI_RA007_Epitope_Rep4 1248.6826355597598 1248.68098490379 29.196 3 0.1957053626415669 0.0006801564359802754 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 54208 16346 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 72.005 2 0.19570337095846396 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 129290 5028 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 24.42 3 0.1957023275307651 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 9989 10757 AYSSYVHQY True PC9_epitope_Rep1 1116.48762415132 1116.48652993586 46.264 2 0.19570230982624173 0.0006801564359802754 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 123507 10885 VIHDNFGIVEG True NCI_RA007_Epitope_Rep1 1198.59823722946 1198.5971499358602 46.332 2 0.19569756720311515 0.0006801564359802754 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 24647 9586 FASHVSPEV True PC9_epitope_Rep5 971.47124581119 971.47014993586 41.833 2 0.19569562002554852 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 28409 11212 FSDVNMQEY True H1975_Epitope_Rep2 1131.4542754177098 1131.4531699358602 48.168 2 0.1956777517494166 0.0006801564359802754 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 67206 9316 LTDITKGVQY True H1975_Epitope_Rep2 1136.607739284 1136.60717496793 40.794 1 0.1956760084500143 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 92262 19491 RQLDMELVSV True PC9_epitope_Rep1 1188.61725842188 1188.6161699358602 79.79 2 0.19565875500786872 0.0006801564359802754 0.9438714419765777 ['ENSG00000089902|ENST00000262241|RCOR1'] 40829 16189 HVLDVIHEV True PC9_epitope_Rep1 1059.57129420563 1059.57018993586 67.088 2 0.1956554620777266 0.0006801564359802754 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 14376 8639 DTENQTLNY True H1975_Epitope_Rep1 1096.46728262956 1096.46618993586 38.159 2 0.1956503884009046 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217'] 69490 10829 LVSESSDVLPK True PC9_epitope_Rep2 1172.6288686514001 1172.6277699358602 46.971 2 0.1956472903127461 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 114167 8615 TRSTFSTNY True PC9_epitope_Rep3 1075.49343780775 1075.4923499358601 38.087 2 0.19564351167912913 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 17815 11926 EHYYNAISV True PC9_epitope_Rep6 1094.50327421546 1094.5021699358601 57.115 2 0.19563917916658707 0.0006801564359802754 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 65209 8325 LSEAFHEEY True H1975_Epitope_Rep2 1123.4822044177101 1123.48110993586 36.972 2 0.19561509612413663 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'ENST00000540438.5_1_11:113669964-113691034:-|nuORF'] 17697 16974 EHSLPTLGL True PC9_epitope_Rep4 965.51819600361 965.51708993586 73.28 2 0.19561223048842905 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 106978 17896 SYLENVDHF True PC9_epitope_Rep3 1122.49818883502 1122.49708993586 74.038 2 0.19560882224419188 0.0006801564359802754 0.9438714419765777 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-5|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF'] 41016 16681 HYGLPVVV True PC9_epitope_Rep4 882.49633836022 882.49524993586 72.139 2 0.19560840951235056 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 131868 22403 VYDPLFSQL True PC9_epitope_Rep3 1080.54916177872 1080.5480699358602 91.452 2 0.19559405825958387 0.0006801564359802754 0.9438714419765777 ['ENSG00000100104|ENST00000215917|SRRD'] 11610 14825 DHARLQLQL True PC9_epitope_Rep1 1092.60399131624 1092.60288993586 61.846 2 0.1955932111247715 0.0006801564359802754 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 25537 8683 FEQKGFRLV True H1975_Epitope_Rep1 1122.6185787512197 1122.61693490379 38.331 3 0.19559260174217 0.0006801564359802754 0.9438714419765777 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF', 'NMT1-NME1|1|fusion'] 42801 12402 IFIKDSNSL True PC9_epitope_Rep4 1035.56006081559 1035.5589699358602 55.508 2 0.19559114014207088 0.0006801564359802754 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 30980 6688 GATEITTTITK True H1975_Epitope_Rep3 1134.61321858726 1134.6121299358601 30.68 2 0.1955897216156258 0.0006801564359802754 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000024146'] 24071 15415 EYQKVWNLF True NCI_RA007_Epitope_Rep4 1225.6131590176099 1225.61206993586 66.964 2 0.19558865055394153 0.0006801564359802754 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 97774 10983 SHHENLVSF True PC9_epitope_Rep1 1068.49885754136 1068.49776993586 47.136 2 0.19558539028430197 0.0006801564359802754 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 136433 12851 YHGAEIVSL True PC9_epitope_Rep6 987.50254593947 987.50144993586 60.944 2 0.19558495286938232 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 14987 20802 DYTIGFGKF True PC9_epitope_Rep1 1046.50729696674 1046.5061899358602 84.841 2 0.1955843249052575 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 17468 19091 EHGNFLITV True PC9_epitope_Rep5 1028.52909504048 1028.5279899358602 78.463 2 0.19558063550544139 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 87089 12679 QSELVGQLY True H1975_Epitope_Rep2 1035.52367530687 1035.52256993586 53.871 2 0.1955716528056785 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 59803 7410 LHAQGDPAL True PC9_epitope_Rep5 920.4715801643599 920.47048993586 33.458 2 0.19556959536300966 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000257365|P49356-2|FNTB', 'ENSG00000257365|ENST00000246166|FNTB'] 71342 15010 MHSDMIYNV True PC9_epitope_Rep3 1108.4681516600401 1108.4670499358601 62.862 2 0.19556912886936162 0.0006801564359802754 0.9438714419765777 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 86106 11327 QPQPQPYAV True PC9_epitope_Rep2 1026.5134449763398 1026.5123499358601 48.891 2 0.19556808562919006 0.0006801564359802754 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 74159 6515 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59746993586 30.475 2 0.19556605396274562 0.0006801564359802754 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 73815 9734 NHDTGEYVL True PC9_epitope_Rep4 1046.46688870674 1046.46637496793 45.08 1 0.19556222786686187 0.0006801564359802754 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 71011 5980 [Acetylation]-M[Oxidation]EQVNELKEK True H1975_Epitope_Rep1 1304.6282177251398 1304.62710993586 28.073 2 0.19554946285758176 0.0006801564359802754 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'ENST00000540736.1_1_11:63953733-63960840:+|nuORF'] 130708 15303 VVDIQGVGDLY True H1975_Epitope_Rep2 1176.6026539035597 1176.60154993586 64.022 2 0.19554666561340314 0.0006801564359802754 0.9438714419765777 ['ENSG00000103319|ENST00000263026|EEF2K'] 34676 10136 GQLDTPGVHNV True PC9_epitope_Rep5 1135.56218607391 1135.56108993586 43.973 2 0.19553964437509638 0.0006801564359802754 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 91159 18872 RLPETLPSL True PC9_epitope_Rep5 1024.59169529704 1024.5905899358602 77.61 2 0.19553783038438782 0.0006801564359802754 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 53079 8658 KSDLQPPNYY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 38.262 2 0.1955344801543042 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1'] 40828 18953 HVLDTLIQL True PC9_epitope_Rep6 1050.60734536118 1050.6062499358602 85.549 2 0.19552589864029574 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 40615 17597 HTDWLLDLY True H1975_Epitope_Rep3 1174.56587447202 1174.56476993586 73.51 2 0.19551511727046228 0.0006801564359802754 0.9438714419765777 ['ENSG00000133302|ENST00000265140|SLF1'] 7871 6830 ATANQIILK True NCI_RA007_Epitope_Rep4 970.58113061334 970.58058496793 32.893 1 0.19550876515466403 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 20699 9331 EQISDIDDAVR True NCI_RA007_Epitope_Rep1 1259.59935942827 1259.5982699358601 40.289 2 0.19550291965155228 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 132075 7382 VYIKHPVSL True NCI_RA007_Epitope_Rep4 1054.61751612206 1054.61640993586 35.037 2 0.19550196082907018 0.0006801564359802754 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 17799 19696 EHVQLLQVI True PC9_epitope_Rep2 1077.61824439805 1077.6171499358602 81.148 2 0.195495947991979 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 31458 6200 GEEEALQSQA True H1975_Epitope_Rep2 1060.46728262956 1060.46618993586 28.82 2 0.19547692294712038 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 93947 14714 RVLPPSALQSV True PC9_epitope_Rep2 1165.68190728377 1165.68080993586 61.865 2 0.19547561985728326 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178999|Q96GD4-4|AURKB', 'ENSG00000178999|ENST00000585124|AURKB', 'nc|ENSG00000178999|Q96GD4-5|AURKB', 'nc|ENSG00000178999|Q96GD4-2|AURKB'] 131701 17672 VWSDVTPLTF True NCI_RA007_Epitope_Rep3 1163.58627556343 1163.5851699358602 77.488 2 0.19547540076131767 0.0006801564359802754 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 48625 13511 KEINISFIP True H1975_Epitope_Rep3 1059.59644632431 1059.5953499358602 57.248 2 0.19545999714788423 0.0006801564359802754 0.9438714419765777 ['ENSG00000116266|ENST00000370008|STXBP3'] 45713 18532 ISLPKGVVEV True PC9_epitope_Rep5 1039.62774645259 1039.62664993586 76.306 2 0.19544945799103258 0.0006801564359802754 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 40128 11774 HRDSGILGL True PC9_epitope_Rep2 966.5246783663799 966.52358993586 50.62 2 0.1954483761144841 0.0006801564359802754 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 76123 12871 NRPNLYYEV True PC9_epitope_Rep4 1166.57202248162 1166.57092993586 57.383 2 0.19544750633931682 0.0006801564359802754 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 71711 5499 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 26.164 2 0.19544726723886335 0.0006801564359802754 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 35446 7104 GTEDELDKY True H1975_Epitope_Rep3 1068.46113461996 1068.4600299358601 32.295 2 0.19544036436565282 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENSG00000140416|ENST00000403994|TPM1'] 130097 7963 VTQSNFAVGYK True NCI_RA007_Epitope_Rep1 1212.6138872935996 1212.61278993586 34.967 2 0.19542873147918027 0.0006801564359802754 0.9438714419765777 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000603132.1_1_12:55196819-55197167:-|nuORF'] 24756 14696 FAYDGKDYL True PC9_epitope_Rep6 1090.4971262058598 1090.4960299358602 68.462 2 0.19542563486775993 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 60332 20246 LIGEFLEKV True PC9_epitope_Rep2 1046.60119735158 1046.60010993586 83.296 2 0.19542391820027782 0.0006801564359802754 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 18770 12075 ELDPTNMTY True H1975_Epitope_Rep2 1082.45902644498 1082.4579299358602 51.529 2 0.19541702429575525 0.0006801564359802754 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 86507 8428 QRAITGASL True PC9_epitope_Rep1 915.5137793295099 915.51268993586 37.254 2 0.19541442449538018 0.0006801564359802754 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 114129 6333 TRSITNTTV True PC9_epitope_Rep1 991.52982331647 991.52872993586 29.171 2 0.1954029076086027 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 40482 12879 HSEFTTLLY True H1975_Epitope_Rep2 1109.53932537101 1109.53822993586 54.651 2 0.19539927851167385 0.0006801564359802754 0.9438714419765777 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-6|GTF2IRD2'] 7474 8706 ASDRNIVLY True H1975_Epitope_Rep2 1049.5505587610498 1049.54946993586 38.449 2 0.1953943211514885 0.0006801564359802754 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13'] 21351 5904 ERLKEAYSV True PC9_epitope_Rep4 1093.57677350889 1093.57566993586 29.616 2 0.19539413556919763 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 89475 6350 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 29.355 2 0.1953914834167056 0.0006801564359802754 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 17114 15008 EGSPIKVTL True PC9_epitope_Rep5 942.53859709502 942.53750993586 62.731 2 0.19538239166885257 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF'] 35354 4274 GTADVHFER True NCI_RA007_Epitope_Rep5 1030.48320747722 1030.48210993586 23.017 2 0.1953660420647112 0.0006801564359802754 0.9438714419765777 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 52796 12523 KQTALVELLK True PC9_epitope_Rep4 1141.7070594024499 1141.7054249037901 55.989 3 0.19535828287554022 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 91156 17486 RLPETLPSL True PC9_epitope_Rep4 1024.59169529704 1024.5905899358602 75.262 2 0.19535034342932556 0.0006801564359802754 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 117184 12677 TYTDVTPRQF True PC9_epitope_Rep2 1226.59315184902 1226.5920499358601 54.07 2 0.1953457371175064 0.0006801564359802754 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 72363 9162 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46397496793 40.193 1 0.19534403153704558 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 138564 18565 YRPETGSWVF True PC9_epitope_Rep4 1240.58767254576 1240.58656993586 79.487 2 0.19533427584592036 0.0006801564359802754 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 123387 6838 VIDDTNITR True PC9_epitope_Rep2 1045.5403880001702 1045.53928993586 31.707 2 0.19533166717798073 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 53210 13413 KTDDLTMVLY True H1975_Epitope_Rep2 1197.59512599497 1197.5940299358601 56.728 2 0.19532895640850917 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 73096 4983 NDPSVQQDIK True NCI_RA007_Epitope_Rep2 1142.5567663403 1142.5556699358601 24.005 2 0.19532502892148468 0.0006801564359802754 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 67300 11619 LTDPIQGTEY True H1975_Epitope_Rep2 1135.53971929383 1135.5386299358602 49.759 2 0.19532414048858515 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 8241 14836 ATIIDILTK True NCI_RA007_Epitope_Rep5 986.60119735158 986.60010993586 63.737 2 0.19532034249638888 0.0006801564359802754 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 118523 10693 VDTFLEDVK True H1975_Epitope_Rep1 1064.5389910178399 1064.5378899358602 46.089 2 0.1953198262480067 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 74139 14615 NHYNMQYAL True PC9_epitope_Rep1 1152.50222866964 1152.50112993586 61.04 2 0.1953168604503738 0.0006801564359802754 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2'] 102010 4866 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 23.843 2 0.19531231191469134 0.0006801564359802754 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 48509 11890 KEFPGFLEN True NCI_RA007_Epitope_Rep1 1079.5287606873098 1079.52766993586 50.232 2 0.1953019896408037 0.0006801564359802754 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 38241 14051 HEYPWILSA True H1975_Epitope_Rep1 1114.54474510462 1114.54364993586 59.211 2 0.19529515004399373 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 100131 22733 SLLDIIEKV True PC9_epitope_Rep1 1028.61176203528 1028.6106699358602 92.247 2 0.19528413962319985 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 109974 17653 THSMDLVAL True PC9_epitope_Rep1 985.4902670036099 985.48916993586 72.695 2 0.19527449011654455 0.0006801564359802754 0.9438714419765777 ['ENST00000368535.2_1_10:135193041-135204956:+|nuORF', 'ENSG00000148832|ENST00000278060|PAOX', 'nc|ENSG00000254536|Q6QHF9-5|PAOX', 'nc|ENSG00000254536|Q6QHF9-4|PAOX'] 76298 13481 NSDVSLLNY True H1975_Epitope_Rep3 1023.48728979815 1023.4861899358599 57.131 2 0.19526403133483589 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 67523 15389 LTELPPLDDY True H1975_Epitope_Rep3 1174.57577044938 1174.5746699358601 64.604 2 0.19525865016989108 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 34733 5524 GQNPTNAEVLK True NCI_RA007_Epitope_Rep2 1169.6040508858898 1169.6029499358601 26.103 2 0.19525736085189455 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 4199 20168 AIDPHLLLSV True PC9_epitope_Rep4 1076.6229954253201 1076.62188993586 85.713 2 0.19525702576630602 0.0006801564359802754 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 117198 19700 TYTDVTPRQFF True PC9_epitope_Rep3 1373.6615657620098 1373.6604699358602 81.006 2 0.19525155605510316 0.0006801564359802754 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 74169 6338 NHYQKQLEI True PC9_epitope_Rep4 1171.5985715826298 1171.59691490379 31.454 3 0.1952498499375221 0.0006801564359802754 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 71130 19600 METVWTILP True H1975_Epitope_Rep1 1088.55761828744 1088.55652993586 81.6 2 0.19524969874478193 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 132024 14452 VYGSFASKL True PC9_epitope_Rep5 970.5123823471799 970.51128993586 60.59 2 0.1952472514136662 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 75579 19606 NQPGVLIQV True PC9_epitope_Rep5 966.5498304850599 966.54872993586 80.467 2 0.19524016004062536 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 6792 18085 AQFEHTILL True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 74.866 2 0.19522552745732707 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 14330 17164 DTDIVDEAIYY True H1975_Epitope_Rep3 1315.58197802863 1315.5808899358601 71.655 2 0.19522302732148178 0.0006801564359802754 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 96499 8199 SELEAALQR True NCI_RA007_Epitope_Rep2 1015.5298233164699 1015.52872993586 36.528 2 0.1952216551813431 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 109586 8682 THDDSHLVSL True PC9_epitope_Rep4 1122.5305515924601 1122.5294499358602 40.887 2 0.19521526806786443 0.0006801564359802754 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 133029 10738 VYVQNVVKL True NCI_RA007_Epitope_Rep5 1060.6280808057597 1060.6269899358601 47.941 2 0.19520237363549794 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 79261 8750 PGGYGYGYGR True PC9_epitope_Rep5 1045.4617437566499 1045.4606499358601 38.599 2 0.19520180742613732 0.0006801564359802754 0.9438714419765777 ['ENSG00000102317|ENST00000376759|RBM3', 'ENST00000489344.5_1_X:48433563-48435471:+|nuORF', 'ENST00000466764.5_1_X:48434327-48435471:+|nuORF'] 119932 5653 VEYETYKEA True H1975_Epitope_Rep2 1130.5131701928199 1130.5120699358602 26.741 2 0.19520149223781724 0.0006801564359802754 0.9438714419765777 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 98536 13986 SILPAIFQK True NCI_RA007_Epitope_Rep4 1015.6066170851899 1015.60552993586 61.068 2 0.1952004168758859 0.0006801564359802754 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 26252 19622 FIAKSFYDL True PC9_epitope_Rep2 1102.5698972233 1102.5688099358601 80.861 2 0.19519670829994362 0.0006801564359802754 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 109894 5323 THNPTNATL True PC9_epitope_Rep1 967.47230844035 967.47120993586 25.316 2 0.19519324568429205 0.0006801564359802754 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 53070 11563 KSDEMELLY True H1975_Epitope_Rep2 1126.5216267015398 1126.5205299358602 49.541 2 0.19519191346002482 0.0006801564359802754 0.9438714419765777 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000493082.5_1_5:850626-880074:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-2|BRD9', 'ENST00000495794.5_1_5:864585-881375:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-3|BRD9', 'nc|ENSG00000028310|Q9H8M2-1|BRD9', 'ENST00000495265.5_1_5:864585-889814:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-6|BRD9'] 116802 20622 TYLPTSPLL True PC9_epitope_Rep4 1003.55899818643 1003.55790993586 87.478 2 0.19519121179156032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 97059 6131 SEYIHAQVA True NCI_RA007_Epitope_Rep5 1016.4927095317598 1016.49160993586 30.263 2 0.19519112979405898 0.0006801564359802754 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 7893 6264 ATAQVNPLYK True NCI_RA007_Epitope_Rep3 1103.5975089534697 1103.59640993586 31.641 2 0.19518783002815462 0.0006801564359802754 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENST00000425115.1_1_3:44751367-44751973:-|nuORF'] 5230 12451 ALQEMVHQV True PC9_epitope_Rep3 1053.52771514149 1053.52660993586 52.917 2 0.19518155447850807 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 103715 6221 SREESAGPAL True PC9_epitope_Rep1 1015.4934378077497 1015.49234993586 28.743 2 0.1951674445732038 0.0006801564359802754 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 87002 14764 QRYPGQVIL True PC9_epitope_Rep5 1072.6029286870798 1072.60182993586 61.789 2 0.19516434362740717 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 16208 13506 EEFPSFGA True H1975_Epitope_Rep2 882.3759484440199 882.3753949679301 57.085 1 0.1951637409684093 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 41652 15290 IDIIPNPQER True PC9_epitope_Rep3 1193.64043639461 1193.6393299358601 63.964 2 0.19516232700375355 0.0006801564359802754 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 107954 13695 TAYWKELSL True H1975_Epitope_Rep2 1109.57571087973 1109.57460993586 57.82 2 0.19515729443605942 0.0006801564359802754 0.9438714419765777 ['ENST00000579880.5_1_17:8339285-8348278:+|nuORF', 'ENST00000580738.5_1_17:8339285-8349209:+|nuORF', 'nc|ENSG00000166579|Q9GZM8-3|NDEL1', 'ENSG00000166579|ENST00000334527|NDEL1', 'nc|ENSG00000166579|Q9GZM8-2|NDEL1'] 10880 5046 DAPQDFHPDR True NCI_RA007_Epitope_Rep1 1196.52104953792 1196.51941490379 23.712 3 0.19515032408206384 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'FLNA|p.R664L|1|0.13|ENSG00000196924|chrX:154364557-154364557|C/A|missense_variant'] 99485 9736 SLEPVAVELK True NCI_RA007_Epitope_Rep3 1083.6175756917098 1083.61646993586 45.365 2 0.19514838296204684 0.0006801564359802754 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 104801 8233 STDPSVLGKY True H1975_Epitope_Rep3 1065.5342399905699 1065.5331499358601 36.651 2 0.1951413028155671 0.0006801564359802754 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 35624 5101 GTLNQPLTK True NCI_RA007_Epitope_Rep4 970.54474510462 970.54364993586 26.127 2 0.19513633284210466 0.0006801564359802754 0.9438714419765777 ['ENSG00000103671|ENST00000261884|TRIP4'] 17751 9052 EHTNAIGTL True PC9_epitope_Rep5 954.4770594676199 954.47596993586 39.763 2 0.1951345077095051 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 32369 6166 GGEIQPVSVK True NCI_RA007_Epitope_Rep2 1012.5553097883198 1012.55420993586 28.592 2 0.19513157776566317 0.0006801564359802754 0.9438714419765777 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF', 'ENST00000465573.1_1_2:198365552-198367980:+|nuORF'] 1352 5681 AEEEAATRIPA True H1975_Epitope_Rep2 1156.57241640444 1156.5713099358602 26.85 2 0.19512985847943376 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 5679 7048 APAM[Oxidation]FNIR True NCI_RA007_Epitope_Rep5 934.46947236982 934.46836993586 33.788 2 0.19512621484332338 0.0006801564359802754 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000493479.1_1_4:153472952-153473506:-|nuORF', 'ENST00000507485.1_1_4:152020792-152024033:+|nuORF'] 106854 20954 SYIDVLPEF True PC9_epitope_Rep6 1081.53317736141 1081.53267496793 93.389 1 0.19512089068890254 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 64529 6544 LRDEHNYTL True PC9_epitope_Rep2 1159.56218607391 1159.56055490379 30.585 3 0.19512072307356612 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 113939 19746 TRIWQDVQL True PC9_epitope_Rep5 1157.6193070272097 1157.61820993586 80.998 2 0.1951207134402939 0.0006801564359802754 0.9438714419765777 ['ENSG00000004766|ENST00000305866|VPS50', 'VPS50|p.S583Vfs*7|1|0.23|ENSG00000004766|chr7:93308938-93308938|A/-|frameshift_variant', 'VPS50|p.K778Nfs*7|1|0.13|ENSG00000004766|chr7:93349900-93349900|G/-|frameshift_variant', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 67282 12216 LTDPAIVKV True PC9_epitope_Rep6 954.57498260374 954.57388993586 58.359 2 0.19511877854926105 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 29226 14364 FVDDYTVRV True PC9_epitope_Rep6 1112.55022440788 1112.54912993586 67.147 2 0.19511639633811004 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 8289 8853 ATLAAVLQR True NCI_RA007_Epitope_Rep3 941.56581490237 941.56470993586 41.915 2 0.19510947560880962 0.0006801564359802754 0.9438714419765777 ['ENSG00000159399|ENST00000290573|HK2', 'HK2|p.L795Rfs*10|1|0.41|ENSG00000159399|chr2:74889253-74889262|TGGCCCTGCT/-|frameshift_variant'] 49433 20626 KILSELFTV True PC9_epitope_Rep2 1048.61684741572 1048.61574993586 84.771 2 0.1951063257713597 0.0006801564359802754 0.9438714419765777 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF'] 380 19015 AALDVLTHV True PC9_epitope_Rep5 937.5232813840499 937.52218993586 78.167 2 0.19510293970565856 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31'] 48840 9733 KESDIVLYA True H1975_Epitope_Rep2 1036.5440763982797 1036.5429699358601 42.424 2 0.19509835979500106 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 106923 10154 SYISRTNQL True PC9_epitope_Rep3 1080.5563724174801 1080.55526993586 44.011 2 0.19509794548273895 0.0006801564359802754 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 84856 7878 QHQETINTL True PC9_epitope_Rep5 1082.5356369729 1082.53452993586 35.244 2 0.19509741627244387 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 108844 9675 TEQYPQGLGP True H1975_Epitope_Rep3 1088.5138388991597 1088.51274993586 42.234 2 0.19509654338923935 0.0006801564359802754 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'ENST00000591718.1_1_19:55966993-55972941:-|nuORF'] 118335 7384 VDEVGGEALGR True PC9_epitope_Rep6 1100.5462016565998 1100.5451099358602 37.612 2 0.19509084840638766 0.0006801564359802754 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'CON__P02070', 'CON__Q3SX09'] 2693 8194 AETEFFSKA True H1975_Epitope_Rep3 1028.48147614172 1028.4803699358602 36.498 2 0.19507645688326636 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 129395 7297 VTEGSFVYK True NCI_RA007_Epitope_Rep5 1028.5178616504397 1028.51676993586 34.745 2 0.19507632275337786 0.0006801564359802754 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 28938 6882 FTEPNRHFY True H1975_Epitope_Rep2 1209.5567067706497 1209.5550749037902 31.392 3 0.19507295251433224 0.0006801564359802754 0.9438714419765777 ['ENSG00000165355|ENST00000298097|FBXO33'] 116870 13170 TYNPAFSRL True PC9_epitope_Rep4 1067.53999407735 1067.5388899358602 58.556 2 0.19506469462990114 0.0006801564359802754 0.9438714419765777 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 48699 7491 KEMENFEAP True NCI_RA007_Epitope_Rep4 1093.4750108622898 1093.47390993586 35.46 2 0.1950514415633134 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 42469 4230 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 21.389 2 0.19504946369226725 0.0006801564359802754 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 123821 15001 VIVEPLEQL True NCI_RA007_Epitope_Rep3 1038.5961119711399 1038.5950099358602 66.469 2 0.19504213726907338 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 14676 7185 DVNQQEFVR True NCI_RA007_Epitope_Rep2 1133.5465360097699 1133.54542993586 32.568 2 0.19504061248539648 0.0006801564359802754 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 46942 22218 IVLPEDLQL True PC9_epitope_Rep5 1038.5961119711399 1038.5950099358602 90.468 2 0.195035927650254 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 54162 20200 KYNLINEYF True PC9_epitope_Rep2 1202.5971746003 1202.5960699358602 83.114 2 0.19503439790824012 0.0006801564359802754 0.9438714419765777 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 138296 20726 YQYPVIIHL True PC9_epitope_Rep5 1144.6280808057597 1144.6269899358601 84.78 2 0.19503244536348538 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 13810 9778 DQVANSAFVER True PC9_epitope_Rep2 1234.59421447818 1234.5931099358602 42.949 2 0.19503087805773653 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 109885 13014 THNIIVNQL True PC9_epitope_Rep2 1050.5821932425 1050.58108993586 55.342 2 0.1950204873983082 0.0006801564359802754 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 54232 21419 KYPENFFLL True PC9_epitope_Rep2 1169.61209638845 1169.61098993586 87.861 2 0.19501758815752354 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 54217 16649 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 70.806 2 0.19500986889699237 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 57574 10629 LELEQTYQA True H1975_Epitope_Rep2 1093.52915461013 1093.52804993586 45.908 2 0.19500773464848978 0.0006801564359802754 0.9438714419765777 ['ENSG00000176619|ENST00000325327|LMNB2'] 1887 2742 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5971499358602 14.592 2 0.19500710359200027 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 107298 12281 SYQRAFNEF True PC9_epitope_Rep6 1160.5250722892 1160.5239699358601 58.625 2 0.19499724380335334 0.0006801564359802754 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 113784 15503 TRDQFLDTL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 71.811 2 0.19499484893973662 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 51998 12306 KLEATINELV True NCI_RA007_Epitope_Rep1 1128.63903941228 1128.6379499358602 51.838 2 0.19497909010181116 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 29345 5916 FVEAGAM[Oxidation]AVR True NCI_RA007_Epitope_Rep1 1065.5277155219298 1065.52660993586 27.063 2 0.19497592423133195 0.0006801564359802754 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000414406.2_1_12:20095069-20095366:+|nuORF'] 101537 15537 SPAPPLLHV True PC9_epitope_Rep5 929.53345214493 929.53234993586 64.773 2 0.19497111502672773 0.0006801564359802754 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 17812 12663 EHYYNAISV True PC9_epitope_Rep4 1094.50327421546 1094.5021699358601 56.552 2 0.19496674908372794 0.0006801564359802754 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 17810 13401 EHYYNAISV True PC9_epitope_Rep2 1094.50327421546 1094.5021699358601 56.827 2 0.19496436806765927 0.0006801564359802754 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 76499 7868 NTDHQTQLLY True H1975_Epitope_Rep3 1231.5833154413099 1231.5822099358602 35.24 2 0.1949611112905274 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 1562 5447 AEFAERSVA True NCI_RA007_Epitope_Rep5 978.4770594676199 978.47596993586 27.639 2 0.19496038578969663 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM3|p.K249N|1|0.07|ENSG00000143549|chr1:154170428-154170428|C/G|missense_variant', 'ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 44044 22876 ILLDRLLYL True PC9_epitope_Rep1 1130.7063311264599 1130.7052299358602 92.787 2 0.19495667398459984 0.0006801564359802754 0.9438714419765777 ['ENSG00000143303|ENST00000368216|METTL25B'] 115107 14172 TTVSELVKV True PC9_epitope_Rep4 974.5648118428599 974.56370993586 62.417 2 0.19494743945866946 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008838|O75448-2|MED24', 'ENSG00000008838|ENST00000394128|MED24', 'ENST00000491466.5_1_17:38175784-38176226:-|nuORF'] 47390 11894 IYIINVHSM True NCI_RA007_Epitope_Rep3 1088.56885167748 1088.56774993586 53.918 2 0.19494632102187598 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'ENST00000520571.1_1_8:142199090-142200632:+|nuORF', 'nc|ENSG00000105339|A2RUS2-3|DENND3'] 93457 5626 RSDTPLIYK True NCI_RA007_Epitope_Rep4 1091.5975089534697 1091.59640993586 28.243 2 0.1949440230542955 0.0006801564359802754 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 49381 19652 KIIGAVDQIQL True PC9_epitope_Rep1 1196.71287305888 1196.71176993586 80.416 2 0.19494282447362585 0.0006801564359802754 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 29291 20655 FVDPAQITM True PC9_epitope_Rep3 1020.49501803088 1020.49392993586 84.722 2 0.19494220982692156 0.0006801564359802754 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 26057 11090 FHDNSGDVF True PC9_epitope_Rep2 1036.4250238947598 1036.42392993586 47.983 2 0.19494067081834437 0.0006801564359802754 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 88339 20544 QYLQDAYSF True PC9_epitope_Rep5 1133.5029398622898 1133.50184993586 84.067 2 0.19493963035044312 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 85742 20254 QLVDIIEKV True PC9_epitope_Rep3 1055.62266107215 1055.6215699358602 83.167 2 0.1949387105504637 0.0006801564359802754 0.9438714419765777 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 61163 11832 LLDISQKNLY True H1975_Epitope_Rep1 1205.66558851329 1205.66448993586 50.508 2 0.19493508458941872 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171291|Q8NDP4|ZNF439', 'ENSG00000171291|ENST00000682736|ZNF439'] 34785 19756 GQTEVFQAL True PC9_epitope_Rep3 991.4974605590297 991.49636993586 81.219 2 0.19493469519477366 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'ENST00000574957.1_1_16:3074279-3075849:+|nuORF', 'ENST00000576143.5_1_16:3074279-3076060:+|nuORF', 'ENST00000571046.1_1_16:3074279-3076290:+|nuORF', 'ENST00000574498.5_1_16:3074279-3076221:+|nuORF'] 130549 19846 VTYGFPIML True H1975_Epitope_Rep3 1039.5412399473098 1039.54067496793 83.09 1 0.1949299436101364 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF'] 109408 21523 TGPTRFFLF True PC9_epitope_Rep3 1084.5705659296398 1084.56946993586 88.082 2 0.19492968714657527 0.0006801564359802754 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 42952 6198 IGAEVYHNLK True NCI_RA007_Epitope_Rep1 1142.60840799034 1142.6067749037902 28.144 3 0.19492389848054628 0.0006801564359802754 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 127952 11852 VRPPVQVY True PC9_epitope_Rep3 956.5443511817998 956.54324993586 50.607 2 0.19492318652507468 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 103905 13290 SRMDGEGQLTL True PC9_epitope_Rep2 1205.5710365054497 1205.56992993586 56.398 2 0.19490772829742872 0.0006801564359802754 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 27118 20002 FLQPELVKL True PC9_epitope_Rep2 1085.6484818971699 1085.64738993586 82.34 2 0.19490574004863043 0.0006801564359802754 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4'] 107696 5712 TALIHDGLAR True NCI_RA007_Epitope_Rep5 1065.5930922793698 1065.59198993586 28.659 2 0.1949024275386766 0.0006801564359802754 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12', 'ENST00000484616.2_1_6:133135907-133136327:+|nuORF'] 138812 6196 YSDISGGGHPY True H1975_Epitope_Rep2 1151.48835242731 1151.48724993586 28.805 2 0.19489903943470646 0.0006801564359802754 0.9438714419765777 ['ENSG00000106771|ENST00000374586|TMEM245', 'nc|ENSG00000106771|Q9H330-3|TMEM245'] 31780 4853 GELPRQPTT True NCI_RA007_Epitope_Rep4 997.5192586327701 997.51816993586 25.109 2 0.19488777179359013 0.0006801564359802754 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5', 'HDAC5|p.L646Sfs*24|1|0.2|ENSG00000108840|chr17:44086686-44086686|G/-|frameshift_variant'] 76466 5751 NTDEM[Oxidation]VELR True NCI_RA007_Epitope_Rep1 1121.5022886197298 1121.50118993586 26.426 2 0.19488524192626916 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000483135.1_1_9:86591819-86593167:-|nuORF'] 107318 13276 SYREDPIVY True PC9_epitope_Rep5 1140.5451390274397 1140.5440499358601 56.076 2 0.19488328469985639 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 36422 18334 GVIEKLLTS True PC9_epitope_Rep4 958.5698972233 958.56880993586 78.589 2 0.1948797530118145 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 75981 13919 NRHYYSITI True PC9_epitope_Rep5 1165.58800689893 1165.58635490379 58.56 3 0.19487724191820457 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 47647 11413 IYPPKLHQF True PC9_epitope_Rep2 1141.62841515893 1141.62676490379 49.223 3 0.19487175570381207 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 132196 20290 VYKAFVMETF True PC9_epitope_Rep5 1233.6103821362897 1233.60928993586 83.095 2 0.194868496234018 0.0006801564359802754 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 32501 9245 GGNFGFGDSR True PC9_epitope_Rep4 1012.4362572847999 1012.43516993586 43.158 2 0.19486369337874837 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 4109 8655 AHTAEVNCL True PC9_epitope_Rep1 956.43856578392 956.43746993586 38.13 2 0.1948607271960624 0.0006801564359802754 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 134952 15085 YAFNMKATV True PC9_epitope_Rep2 1043.5110024481899 1043.5099099358602 63.281 2 0.19485802897509794 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 34730 7532 GQNPTEAEL True NCI_RA007_Epitope_Rep5 957.44033960573 957.43924993586 35.658 2 0.19484878638665362 0.0006801564359802754 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 4207 11894 AIDQLHLEY True H1975_Epitope_Rep2 1100.5502244078798 1100.54912993586 50.83 2 0.1948486229166429 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 59114 15487 LGEHNIDVLEG True PC9_epitope_Rep5 1194.5880664685799 1194.58696993586 64.58 2 0.194830177949578 0.0006801564359802754 0.9438714419765777 ['CON__P00761'] 159 13107 AADPVSPLL True NCI_RA007_Epitope_Rep3 881.4858332461699 881.48528496793 58.838 1 0.1948291521860612 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 107294 14908 SYQRAFNEF True PC9_epitope_Rep3 1160.5250722892 1160.5239699358601 62.479 2 0.19482765403588168 0.0006801564359802754 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 35631 10075 GTLSSWNLK True NCI_RA007_Epitope_Rep1 1004.52909504048 1004.52798993586 43.199 2 0.19481462850960918 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 76612 17137 NTFTKLITV True PC9_epitope_Rep6 1035.59644632431 1035.5953499358602 78.503 2 0.1948119076566782 0.0006801564359802754 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB'] 28311 16307 FRYPTTEEL True PC9_epitope_Rep5 1154.5607890915799 1154.5596899358602 67.721 2 0.19480947620397374 0.0006801564359802754 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 31925 12917 GEQWTPIEP True H1975_Epitope_Rep3 1055.4923751785898 1055.4912699358601 54.914 2 0.1948065296704276 0.0006801564359802754 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 139812 19520 YVDDTQFVRF True PC9_epitope_Rep2 1288.60880191316 1288.6077099358602 80.468 2 0.19480483131048787 0.0006801564359802754 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000487245.5_1_6:31239370-31239763:-|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 23894 11314 EYMKHTRLF True PC9_epitope_Rep5 1223.6121134717898 1223.61046490379 48.511 3 0.19480069770651307 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 46423 7425 ITLDNAYM[Oxidation]EK True H1975_Epitope_Rep1 1212.5696399035598 1212.5685499358601 33.564 2 0.1947667579533675 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 125233 8052 VLQSFTVDSSK True H1975_Epitope_Rep3 1209.62411762413 1209.6230299358601 35.945 2 0.1947661086728237 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 22299 10705 ETEDVNLAY True H1975_Epitope_Rep2 1052.4662200004 1052.4651299358602 46.201 2 0.19476576086984776 0.0006801564359802754 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000153767|ENST00000283875|GTF2E1'] 47879 10237 IYTSSVNRL True PC9_epitope_Rep1 1051.56620882519 1051.5651099358602 44.258 2 0.19476337766198734 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 40354 5609 HRTDSEIAL True PC9_epitope_Rep6 1040.5250722892 1040.5239699358601 29.646 2 0.1947632868270434 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 111602 10122 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1189.6376598937302 1189.63656993586 43.871 2 0.19476297267859 0.0006801564359802754 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 24332 10479 FADLSEAANR True PC9_epitope_Rep3 1092.5199869087598 1092.5188899358602 45.245 2 0.1947546912251934 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 108237 10588 TEAGMFAIRA True H1975_Epitope_Rep3 1065.5277151414898 1065.52660993586 45.796 2 0.19475338130351044 0.0006801564359802754 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000470499.1_1_3:131895323-131895440:+|nuORF', 'ENSG00000161057|ENST00000292644|PSMC2', 'nc|ENSG00000161057|P35998-2|PSMC2'] 44722 10470 IPQLNSKAV True PC9_epitope_Rep1 968.5654805492 968.56438993586 45.162 2 0.19474390689422888 0.0006801564359802754 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 117662 9301 VAITRVANL True H1975_Epitope_Rep2 955.5814649665099 955.58036993586 40.734 2 0.19474164678767777 0.0006801564359802754 0.9438714419765777 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'nc|ENSG00000116586|Q9Y2Q5-2|LAMTOR2'] 102506 9835 SPYSGPKFNSA True PC9_epitope_Rep1 1153.54038800017 1153.53928993586 42.692 2 0.19474089151956164 0.0006801564359802754 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 105942 14646 SVLEPPLFLK True NCI_RA007_Epitope_Rep5 1141.6746966450098 1141.67358993586 63.004 2 0.19473906005359912 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 43028 8458 IGGIGTVPVGR True H1975_Epitope_Rep1 1024.6029286870798 1024.60182993586 37.464 2 0.19473164210603724 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 77165 16099 NYFLWTEKF True NCI_RA007_Epitope_Rep4 1246.60225998074 1246.60116993586 69.821 2 0.19472939559359903 0.0006801564359802754 0.9438714419765777 ['ENSG00000100351|ENST00000344138|GRAP2'] 5119 5375 ALM[Oxidation]DEVVK True H1975_Epitope_Rep3 919.4684693103098 919.46736993586 25.741 2 0.19472427912931034 0.0006801564359802754 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 14956 13868 DYQALRTSI True PC9_epitope_Rep4 1065.54547338061 1065.54436993586 61.245 2 0.19472350319006837 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 127638 9399 VRDQTELRL True PC9_epitope_Rep5 1128.62512068364 1128.6234749037899 41.108 3 0.1947213901904089 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1', 'IRAK1|p.P308Hfs*45|1|0.26|ENSG00000184216|chrX:154017054-154017054|G/-|frameshift_variant'] 138425 9786 YRDPYTGQSV True PC9_epitope_Rep6 1184.5462016566 1184.5451099358602 48.092 2 0.19471736721404145 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 140442 13063 YYFPVKNVI True NCI_RA007_Epitope_Rep3 1141.6171817688898 1141.6160899358601 58.663 2 0.1947118570446121 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 49007 21598 KFIDPIYQVW True PC9_epitope_Rep5 1307.69140933831 1307.6903099358601 88.116 2 0.1947095795715995 0.0006801564359802754 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 35352 4183 GTADVHFER True NCI_RA007_Epitope_Rep3 1030.48320747722 1030.48210993586 23.082 2 0.19469742923519895 0.0006801564359802754 0.9438714419765777 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 94779 20686 RYLPTGSFPF True PC9_epitope_Rep5 1183.6025943339098 1183.6014899358602 84.624 2 0.19469418726568197 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 132965 22023 VYVDDIYVI True PC9_epitope_Rep2 1097.56447748969 1097.5633899358602 90.183 2 0.1946934121604424 0.0006801564359802754 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 4862 22804 ALFVRLLALA True PC9_epitope_Rep5 1085.6961007959299 1085.69500993586 92.706 2 0.1946930805556316 0.0006801564359802754 0.9438714419765777 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000504185.5_1_5:135364744-135380547:+|nuORF'] 105628 9933 SVFEDPVISK True NCI_RA007_Epitope_Rep5 1119.58119018299 1119.58008993586 44.85 2 0.19469235930211679 0.0006801564359802754 0.9438714419765777 ['ENSG00000125445|ENST00000245539|MRPS7'] 94836 14870 RYLVISEKL True PC9_epitope_Rep5 1119.66519459047 1119.6640899358601 62.2 2 0.19468798065270368 0.0006801564359802754 0.9438714419765777 ['ENSG00000116212|ENST00000371370|LRRC42'] 44097 9052 ILMEHIHKL True PC9_epitope_Rep4 1132.64268532408 1132.64104490379 42.393 3 0.19468646310013735 0.0006801564359802754 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 133022 16047 VYVQHPITF True PC9_epitope_Rep5 1102.5811306133398 1102.58002993586 66.713 2 0.19468558957934937 0.0006801564359802754 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 69169 7375 LVLVGDGGTGK True H1975_Epitope_Rep3 1014.57095985246 1014.56986993586 33.345 2 0.1946823415186283 0.0006801564359802754 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 6798 17591 AQFHPTEDLVV True PC9_epitope_Rep3 1254.6244519773002 1254.62334993586 72.852 2 0.1946800312776557 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 36387 22109 GVIAEILRGV True PC9_epitope_Rep5 1025.6233297784897 1025.62222993586 90.076 2 0.1946769897399744 0.0006801564359802754 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 83085 18021 PYNDYFEYF True NCI_RA007_Epitope_Rep3 1256.50260550912 1256.5015099358602 78.969 2 0.19466660410615522 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 107303 8357 SYRDSYESY True PC9_epitope_Rep2 1168.4672826295598 1168.46618993586 37.518 2 0.19466653806883139 0.0006801564359802754 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 138549 17405 YRNAYTMVL True PC9_epitope_Rep5 1129.55901526977 1129.5579099358602 71.948 2 0.1946663147152751 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant'] 45111 12729 IQTAVRLLL True NCI_RA007_Epitope_Rep3 1025.6597152872098 1025.65860993586 57.304 2 0.19466411084470822 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC4|p.R93G|1|0.26|ENSG00000278588|chr6:26123628-26123628|T/C|missense_variant', 'H2BC4|p.E94D|1|0.3|ENSG00000278588|chr6:26123623-26123623|C/A|missense_variant', 'H2BC7|p.E94D|1|0.38|ENSG00000277224|chr6:26199840-26199840|G/C|missense_variant', 'H2BC21|p.P104L|1|0.5|ENSG00000184678|chr1:149886330-149886330|G/A|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 4723 17296 ALDTM[Oxidation]NFDVIK True PC9_epitope_Rep1 1281.62748913285 1281.62638993586 71.345 2 0.19466280784674417 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 61203 16091 LLDPASFEY True H1975_Epitope_Rep2 1053.50187723313 1053.50137496793 67.103 1 0.1946573236001738 0.0006801564359802754 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 70346 20370 LYPQFM[Oxidation]FHL True PC9_epitope_Rep4 1210.5845021220598 1210.5834099358601 86.498 2 0.19465663665946897 0.0006801564359802754 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 54215 16759 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 72.646 2 0.19465478932758218 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 29661 9951 FVM[Oxidation]QEEFSR True PC9_epitope_Rep1 1187.5281094447498 1187.5270099358602 43.138 2 0.1946534626545478 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 47402 15425 IYIKHPHLF True PC9_epitope_Rep3 1166.66004964038 1166.6584049037901 64.487 3 0.19464618793681202 0.0006801564359802754 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 21476 4895 ERQPGAASL True PC9_epitope_Rep2 927.4773938207899 927.47628993586 24.194 2 0.19464466970472227 0.0006801564359802754 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 38240 13953 HEYPWILSA True H1975_Epitope_Rep1 1114.54474510462 1114.54364993586 58.826 2 0.19463553806933204 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 14928 14612 DYLEVAKHF True PC9_epitope_Rep6 1120.55530978832 1120.5542099358602 68.115 2 0.19463395914847098 0.0006801564359802754 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 24192 19200 EYTRALFLL True PC9_epitope_Rep6 1124.62299542532 1124.62188993586 86.506 2 0.1946313603203188 0.0006801564359802754 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2'] 42239 3707 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 19.318 2 0.1946311997012758 0.0006801564359802754 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 1844 10896 AEIEELTASA True H1975_Epitope_Rep1 1032.4975201286798 1032.49642993586 46.873 2 0.19462618603610243 0.0006801564359802754 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B'] 131791 18448 VYAILTHGI True PC9_epitope_Rep5 985.5596668927699 985.55856993586 75.981 2 0.194619945717693 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 48602 7851 KEIEGIFHA True H1975_Epitope_Rep3 1042.54474510462 1042.54364993586 35.175 2 0.19461657095481058 0.0006801564359802754 0.9438714419765777 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1'] 116800 21475 TYLPTSPLL True PC9_epitope_Rep3 1003.55899818643 1003.55790993586 87.895 2 0.19460768239526222 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 119694 10536 VETDFSTPTP True H1975_Epitope_Rep2 1092.49752012868 1092.49642993586 45.548 2 0.19460707998553958 0.0006801564359802754 0.9438714419765777 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 89836 21301 RFLDDLGLKF True PC9_epitope_Rep1 1222.6710082468996 1222.66990993586 86.762 2 0.1946055668036023 0.0006801564359802754 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 86966 9052 QRVGQAVNL True PC9_epitope_Rep1 983.5512274673898 983.55012993586 39.67 2 0.19460044805944973 0.0006801564359802754 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 130753 12474 VVDPNQVNV True PC9_epitope_Rep1 982.5083595959001 982.50726993586 52.849 2 0.1945956605503831 0.0006801564359802754 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 95816 5127 SDGVAVLK True H1975_Epitope_Rep1 787.44396843419 787.44286993586 24.79 2 0.19459303041700265 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 140839 18972 YYTDIMHTL True PC9_epitope_Rep4 1155.5270464351497 1155.5259499358601 81.065 2 0.19459088589982715 0.0006801564359802754 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 74834 10125 NLPLPPPPPPR True NCI_RA007_Epitope_Rep2 1193.6920780446499 1193.6909899358602 43.972 2 0.19457507993395537 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 89395 9672 REMPGVWGA True H1975_Epitope_Rep2 1001.4752856458098 1001.47418993586 42.184 2 0.1945729392479408 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 22679 10682 ETTFLVDKY True H1975_Epitope_Rep3 1114.5546410819798 1114.55354993586 46.164 2 0.19456059938106002 0.0006801564359802754 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 47508 12763 IYLEKLKTI True PC9_epitope_Rep6 1119.69034670915 1119.68924993586 60.586 2 0.1945449588215271 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 139018 9641 YSHFQHLLY True H1975_Epitope_Rep2 1206.5821932425001 1206.58054490379 42.062 3 0.1945412028440735 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 29628 22830 FVLPELPSV True PC9_epitope_Rep5 999.56408356687 999.56298993586 92.811 2 0.19454010232188704 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 94691 8242 RYLENGKETL True PC9_epitope_Rep1 1221.6353510141698 1221.63424993586 36.537 2 0.19452345396501394 0.0006801564359802754 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 6958 14837 AQMDYYGTRL True PC9_epitope_Rep5 1216.55465816532 1216.5535699358602 62.072 2 0.1945228030824083 0.0006801564359802754 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000397102.5_1_3:10355120-10362775:-|nuORF', 'ENST00000397099.1_1_3:10357003-10360966:-|nuORF'] 29179 19871 FVADEELVHL True PC9_epitope_Rep2 1170.5920892198599 1170.59098993586 81.827 2 0.19452055501767396 0.0006801564359802754 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51', 'ENST00000530673.1_2_11:64878667-64879056:+|nuORF', 'ENST00000533827.5_1_11:64876997-64879056:+|nuORF'] 7084 9035 AQYDGAYKV True PC9_epitope_Rep1 1013.4818104948899 1013.48070993586 39.603 2 0.19451943745558975 0.0006801564359802754 0.9438714419765777 ['ENST00000469827.1_1_3:58417358-58419536:-|nuORF', 'ENST00000480626.5_1_3:58417333-58419536:-|nuORF', 'ENST00000482894.5_1_3:58417133-58419536:-|nuORF', 'nc|ENSG00000168291|P11177-3|PDHB', 'nc|ENSG00000168291|P11177-2|PDHB', 'ENSG00000168291|ENST00000302746|PDHB'] 24730 11327 FAYDGKDYL True NCI_RA007_Epitope_Rep3 1090.4971262058598 1090.4960299358602 51.668 2 0.19451306277431 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 94423 14446 RYFENPQVI True PC9_epitope_Rep4 1164.5927579262 1164.5916699358602 63.475 2 0.19450722818350663 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 9934 15802 AYQHLFYLL True NCI_RA007_Epitope_Rep3 1166.6124307416198 1166.61132993586 69.795 2 0.19450653661753706 0.0006801564359802754 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 39825 15480 HQFESSFEL True PC9_epitope_Rep6 1122.4981888350198 1122.49708993586 71.715 2 0.19450001133997158 0.0006801564359802754 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 48600 7922 KEIEGIFHA True H1975_Epitope_Rep2 1042.54474510462 1042.54364993586 35.418 2 0.19449194226076302 0.0006801564359802754 0.9438714419765777 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1'] 94468 9354 RYGLVTNEI True NCI_RA007_Epitope_Rep3 1063.56620882519 1063.5651099358602 43.885 2 0.19449106728146612 0.0006801564359802754 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 96397 14085 SEIDLFNIR True H1975_Epitope_Rep3 1105.57677350889 1105.57566993586 59.504 2 0.19449024516938596 0.0006801564359802754 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 63990 20389 LQAPPLTSL True PC9_epitope_Rep3 938.5436824754601 938.54258993586 83.677 2 0.1944877892630487 0.0006801564359802754 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 88229 14660 QYDPYTDSRF True PC9_epitope_Rep3 1290.55168095986 1290.5505899358602 61.525 2 0.19448444241203833 0.0006801564359802754 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 35400 13110 GTDELRLLY True H1975_Epitope_Rep2 1078.56587447202 1078.56476993586 55.55 2 0.19448432441333421 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 119872 10779 VEVTEFEDIK True H1975_Epitope_Rep1 1207.59723416995 1207.59612993586 46.423 2 0.19447503111985423 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 139633 6028 YTSDSPGSY True H1975_Epitope_Rep3 975.38215602327 975.38160496793 28.201 1 0.19447036260310355 0.0006801564359802754 0.9438714419765777 ['ENSG00000160877|ENST00000292431|NACC1'] 23888 9042 EYMKHTRLF True PC9_epitope_Rep2 1223.6121134717898 1223.61046490379 40.126 3 0.19446848813242593 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 75524 19884 NQLDGIHLL True PC9_epitope_Rep5 1021.5556441414899 1021.55454993586 81.536 2 0.1944653068227387 0.0006801564359802754 0.9438714419765777 ['DHRS1-METTL3|1|fusion', 'ENSG00000165819|ENST00000298717|METTL3'] 74880 10581 NLQTDLSDGLR True H1975_Epitope_Rep3 1230.62042922602 1230.6193299358602 45.77 2 0.19446118660925582 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 126684 17898 VPRPAVLDPAL True PC9_epitope_Rep3 1146.67609362734 1146.6749899358601 74.045 2 0.19445941628945165 0.0006801564359802754 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 127244 20691 VQIPFFAKL True PC9_epitope_Rep4 1061.62735252977 1061.6262499358602 87.748 2 0.19444828034844056 0.0006801564359802754 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD'] 103743 14652 SRFEFNQSL True PC9_epitope_Rep4 1126.54072235334 1126.5396299358601 64.291 2 0.194447778852183 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.D632Efs*4|1|0.14|ENSG00000048028|chr11:113812336-113812352|TCAGGCCTCCATAGGAA/-|frameshift_variant', 'ENST00000545608.5_2_11:113688400-113704155:-|nuORF', 'ENST00000540438.5_1_11:113691037-113702685:-|nuORF'] 26782 10492 FLDSTGSRLDY True H1975_Epitope_Rep1 1272.59863115228 1272.5975299358602 45.312 2 0.19444266547428726 0.0006801564359802754 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 54099 14345 KYMDVQFDF True NCI_RA007_Epitope_Rep4 1191.52704643515 1191.5259499358601 62.485 2 0.19443512950164996 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 132898 13469 VYTTMAEHF True PC9_epitope_Rep2 1097.48518162317 1097.48408993586 57.088 2 0.19443115070314887 0.0006801564359802754 0.9438714419765777 ['ENSG00000117472|ENST00000372003|TSPAN1'] 106917 6720 SYISRTNQL True NCI_RA007_Epitope_Rep5 1080.5563724174801 1080.55526993586 32.521 2 0.19442594619691672 0.0006801564359802754 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 114277 8849 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.58478993586 38.421 2 0.19442365163420208 0.0006801564359802754 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 28835 5230 FTDKSAEDY True H1975_Epitope_Rep2 1074.4505699362599 1074.4494699358602 25.185 2 0.19442086444223766 0.0006801564359802754 0.9438714419765777 ['ENST00000533568.5_1_11:77069900-77103583:-|nuORF', 'ENSG00000149269|ENST00000356341|PAK1', 'nc|ENSG00000149269|Q13153-2|PAK1'] 53438 14428 KVIDEIYRV True PC9_epitope_Rep1 1133.64445914589 1133.6433699358602 60.321 2 0.19441607130368838 0.0006801564359802754 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 23903 21161 EYMLEKSFYQF True PC9_epitope_Rep3 1483.6693535643901 1483.66824993586 86.682 2 0.1944093631241351 0.0006801564359802754 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 65318 14844 LSELEAALQR True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 62.362 2 0.1944038800078503 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 83907 9282 QEISHLIEP True NCI_RA007_Epitope_Rep3 1064.55022440788 1064.54912993586 43.618 2 0.19439539177474538 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 28185 18606 FRPEWQSVY True PC9_epitope_Rep5 1210.57710786206 1210.5760099358602 76.592 2 0.1943914441574676 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2', 'ENST00000512755.1_1_13:33101488-33110480:-|nuORF'] 116946 11007 TYPIKTPTF True NCI_RA007_Epitope_Rep4 1066.5698972233001 1066.5688099358601 49.206 2 0.1943907900341544 0.0006801564359802754 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 92151 6331 RQAQEYEAL True NCI_RA007_Epitope_Rep4 1106.5356369728997 1106.53452993586 30.956 2 0.1943862819803326 0.0006801564359802754 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 132226 19052 VYKPVSIYL True PC9_epitope_Rep1 1080.6219327961599 1080.62082993586 78.074 2 0.1943804177722257 0.0006801564359802754 0.9438714419765777 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 68974 14433 LVGIDIFTGK True H1975_Epitope_Rep1 1061.61209638845 1061.61098993586 60.712 2 0.1943790879923457 0.0006801564359802754 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 4668 6071 ALDDYEHHY True H1975_Epitope_Rep2 1161.4727023631701 1161.4710449037902 28.329 3 0.19437647319728038 0.0006801564359802754 0.9438714419765777 ['ENST00000482153.1_1_10:135122453-135123793:+|nuORF', 'ENSG00000198546|ENST00000361518|ZNF511', 'nc|ENSG00000198546|Q8NB15-1|ZNF511'] 74401 20419 NIVDKFVIV True PC9_epitope_Rep2 1045.61718176889 1045.6160899358601 83.969 2 0.19436915373685765 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 29088 12467 FTQGHIVEV True PC9_epitope_Rep3 1028.52909504048 1028.5279899358602 52.978 2 0.1943644422115688 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 86690 13944 QRIDEFEAM True PC9_epitope_Rep4 1137.5124590001699 1137.51136993586 61.54 2 0.19436382498361118 0.0006801564359802754 0.9438714419765777 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 75462 19812 NQIGAKFWEV True PC9_epitope_Rep1 1190.60840799034 1190.60730993586 81.022 2 0.19435954686953574 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 26253 20043 FIAKSFYDL True PC9_epitope_Rep3 1102.5698972233 1102.5688099358601 82.345 2 0.1943570559641381 0.0006801564359802754 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 26168 18489 FHQESAVWL True PC9_epitope_Rep1 1115.5399940773498 1115.5388899358602 75.908 2 0.1943568914770821 0.0006801564359802754 0.9438714419765777 ['ENST00000314423.11_1_16:69166475-69170710:+|nuORF'] 98281 5286 SIFKQPVTK True NCI_RA007_Epitope_Rep1 1046.61243074162 1046.61132993586 24.644 2 0.1943547138925833 0.0006801564359802754 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 117459 12601 VADTVARVL True PC9_epitope_Rep5 942.5498304850598 942.54872993586 53.47 2 0.19435170804656837 0.0006801564359802754 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 139348 8779 YTDSYTDTY True H1975_Epitope_Rep1 1127.42950013851 1127.42897496793 38.699 1 0.1943516241533945 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 38222 5493 HEVKDNYIP True H1975_Epitope_Rep2 1113.5454733806098 1113.54436993586 26.141 2 0.19434786577932261 0.0006801564359802754 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 89505 13536 REQQLISAVFP True H1975_Epitope_Rep1 1286.6982856238997 1286.69718993586 57.187 2 0.19434254748021418 0.0006801564359802754 0.9438714419765777 ['ENST00000577961.5_1_18:756649-756733:-|nuORF', 'ENST00000418510.1_1_22:26043331-26044389:+|nuORF'] 42276 8670 IEIGKVPPP True H1975_Epitope_Rep2 948.5644179200399 948.56332993586 38.309 2 0.19434241711386308 0.0006801564359802754 0.9438714419765777 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B'] 75410 14916 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.52857496793 62.637 1 0.19434165842845794 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 93861 6331 RVFSWSQAK True NCI_RA007_Epitope_Rep5 1107.58252759567 1107.5814299358601 31.029 2 0.1943311802448173 0.0006801564359802754 0.9438714419765777 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 28427 13099 FSEEHYIFY True H1975_Epitope_Rep2 1233.5342399905699 1233.5331499358601 55.51 2 0.19432368706758787 0.0006801564359802754 0.9438714419765777 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'nc|ENSG00000145715|P20936-2|RASA1', 'nc|ENSG00000145715|P20936-4|RASA1'] 8067 13759 ATEEAPYWTY True H1975_Epitope_Rep1 1229.5240692296898 1229.5229699358601 58.066 2 0.19431599461540536 0.0006801564359802754 0.9438714419765777 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'CHPT1|p.C163Lfs*31|1|0.31|ENSG00000111666|chr12:101714559-101714560|-/T|frameshift_variant', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 94475 19984 RYGNTPFLF True PC9_epitope_Rep2 1113.56072952193 1113.5596299358601 82.27 2 0.1943158603452898 0.0006801564359802754 0.9438714419765777 ['ENSG00000188419|ENST00000357749|CHM'] 114172 8405 TRSTFSTNY True PC9_epitope_Rep5 1075.49343780775 1075.4923499358601 37.27 2 0.1943130299564745 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 85159 9544 QIYGVFDEK True NCI_RA007_Epitope_Rep3 1097.53932537101 1097.53822993586 44.628 2 0.19430961213119524 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12', 'nc|ENSG00000150712|Q9C0I1-3|MTMR12', 'MTMR12|p.A373Sfs*99|1|0.31|ENSG00000150712|chr5:32242111-32242112|-/T|frameshift_variant'] 125593 18782 VMAPRALLL True PC9_epitope_Rep2 982.5997578829398 982.59866993586 77.616 2 0.19430939234225 0.0006801564359802754 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 89345 8692 REMEENFAV True H1975_Epitope_Rep2 1123.49680893603 1123.49570993586 38.395 2 0.1943065311843682 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 103520 12897 SRDDNM[Oxidation]FQI True PC9_epitope_Rep3 1140.48697290876 1140.4858699358601 54.627 2 0.1943024151588646 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 87410 10691 QTDQM[Oxidation]VFNAY True H1975_Epitope_Rep2 1231.51793868387 1231.5168499358601 46.147 2 0.1942909358105871 0.0006801564359802754 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 86677 16821 QRIDEFEAL True PC9_epitope_Rep2 1119.5560380643099 1119.5549499358601 69.95 2 0.19428741743566777 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 101813 12935 SPIENIQRVAA True PC9_epitope_Rep2 1196.6513354314802 1196.6502299358601 55.049 2 0.19428371237754577 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 77133 16449 NYATRIVTL True PC9_epitope_Rep5 1049.58694426977 1049.58584993586 68.269 2 0.1942814206826595 0.0006801564359802754 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 113304 12986 TQIDHYVGI True PC9_epitope_Rep6 1044.52400966004 1044.52290993586 61.526 2 0.19427991695273453 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 107054 20284 SYLPLAHMF True PC9_epitope_Rep4 1077.53173789277 1077.53064993586 86.166 2 0.19427933168378436 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 64077 9428 LQEAEEWYK True NCI_RA007_Epitope_Rep1 1194.55570371114 1194.55460993586 40.667 2 0.19427907340254016 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 45083 6341 IQRTPKIQVY True NCI_RA007_Epitope_Rep3 1244.7241064489199 1244.72245490379 31.948 3 0.1942753444258031 0.0006801564359802754 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 77107 15378 NYAQVFNKL True PC9_epitope_Rep6 1095.57129420563 1095.57018993586 71.297 2 0.1942728278609211 0.0006801564359802754 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 70469 17825 LYSEVSHLL True PC9_epitope_Rep4 1059.56006081559 1059.5589699358602 76.596 2 0.19427137318187312 0.0006801564359802754 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 42057 6772 IEEDKWRVA True H1975_Epitope_Rep3 1144.5876725457601 1144.58656993586 31.003 2 0.19427090725347565 0.0006801564359802754 0.9438714419765777 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'STARD4|p.K141Rfs*29|1|0.29|ENSG00000164211|chr5:111500082-111500082|T/-|frameshift_variant', 'ENSG00000164211|ENST00000296632|STARD4'] 67380 5010 LTDTPKATSY True H1975_Epitope_Rep2 1095.54480467427 1095.54370993586 24.354 2 0.1942634616731791 0.0006801564359802754 0.9438714419765777 ['ENST00000466854.5_1_3:122081873-122084420:-|nuORF', 'ENST00000460810.1_1_3:122081873-122084409:-|nuORF'] 1722 8133 AEGQLRLPA True H1975_Epitope_Rep2 953.5294293936498 953.52832993586 36.233 2 0.19426189644344308 0.0006801564359802754 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1'] 113753 17882 TRDPLVIEL True PC9_epitope_Rep6 1054.60225998074 1054.60116993586 81.409 2 0.1942539869440337 0.0006801564359802754 0.9438714419765777 ['ENSG00000134285|ENST00000550765|FKBP11', 'ENST00000551694.5_1_12:49318004-49319277:-|nuORF', 'nc|ENSG00000134285|Q9NYL4-2|FKBP11', 'ENST00000553027.1_1_12:49318338-49318461:-|nuORF', 'ENST00000546671.5_1_12:49317517-49318461:-|nuORF'] 29393 12646 FVEWIPNNVK True NCI_RA007_Epitope_Rep1 1244.65535818276 1244.6542699358602 53.17 2 0.19425387724861548 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 33120 7568 GKMERQVFL True NCI_RA007_Epitope_Rep4 1106.5906497512199 1106.58954993586 35.759 2 0.19425250161909746 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 132739 19436 VYSIVPQSW True PC9_epitope_Rep6 1077.54949613189 1077.54838993586 87.421 2 0.1942496690081204 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 104240 9306 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4603699358602 40.753 2 0.19424945321742257 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 75455 19837 NQIEDNDDFQL True PC9_epitope_Rep2 1349.57353860325 1349.57244993586 81.694 2 0.19424912854992968 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 89796 9430 RFEEKHAYF True PC9_epitope_Rep1 1225.5880068989297 1225.58635490379 41.13 3 0.19424201492681858 0.0006801564359802754 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 135297 15017 YCDPVVLTY True H1975_Epitope_Rep2 1071.4946836777099 1071.49417496793 62.914 1 0.19423747765447147 0.0006801564359802754 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 17467 17758 EHGNFLITV True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 76.328 2 0.19423723211954302 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 104721 12079 STDHIPILY True H1975_Epitope_Rep2 1057.54441075145 1057.5433099358602 51.544 2 0.19422749636681516 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 94752 17147 RYLNEFEEL True PC9_epitope_Rep6 1211.5822528121498 1211.5811499358601 78.542 2 0.19422427322051372 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 64258 19144 LQLDKEFQL True PC9_epitope_Rep4 1132.61282466444 1132.61172993586 81.732 2 0.19421854651736106 0.0006801564359802754 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'nc|ENSG00000068438|Q9UET6-2|FTSJ1', 'ENST00000487353.5_1_X:48336396-48336561:+|nuORF'] 116127 6592 TVSSLQESGLK True NCI_RA007_Epitope_Rep2 1147.60846755999 1147.60736993586 30.252 2 0.19421118692116163 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 138010 11089 YQAVTATLEEK True PC9_epitope_Rep3 1251.63468230783 1251.63358993586 47.651 2 0.19420227800173015 0.0006801564359802754 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 140324 10595 YYEEQHPEL True PC9_epitope_Rep2 1206.5193182024198 1206.51822993586 46.069 2 0.1941889126660322 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 17541 14923 EHIPESPYL True PC9_epitope_Rep2 1083.52367530687 1083.52256993586 62.663 2 0.19418707034646657 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 106855 20955 SYIDVLPEF True PC9_epitope_Rep6 1081.53317736141 1081.53208993586 93.393 2 0.19418589649870757 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 114021 13357 TRMPDGPVAL True PC9_epitope_Rep4 1055.54336520563 1055.54226993586 59.282 2 0.19418567073347615 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 89935 20238 RFVNVVPTF True PC9_epitope_Rep1 1077.5971150306498 1077.5960099358601 82.672 2 0.19418476968914894 0.0006801564359802754 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 4752 6869 ALEEAMEQK True PC9_epitope_Rep1 1047.4906609264297 1047.4895699358601 31.226 2 0.1941772755938904 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 98393 23239 SIIDEFLHI True PC9_epitope_Rep5 1085.57571087973 1085.57460993586 94.372 2 0.19416348625432456 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 26231 16503 FHYEADGANVL True PC9_epitope_Rep3 1234.5618517207397 1234.56074993586 68.615 2 0.19416282365501605 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 83086 18067 PYNDYFEYF True NCI_RA007_Epitope_Rep4 1256.50260550912 1256.5015099358602 78.182 2 0.19415241498337465 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 105089 10596 STLDIVLANK True NCI_RA007_Epitope_Rep3 1072.61282466444 1072.61172993586 48.728 2 0.19413679537306494 0.0006801564359802754 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 84671 20151 QHFDAAYIF True PC9_epitope_Rep1 1110.5134449763398 1110.5123499358601 82.341 2 0.1941318867723703 0.0006801564359802754 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 93820 9459 RVDPAKGLFY True H1975_Epitope_Rep1 1164.6291434349198 1164.6280499358602 41.301 2 0.19413137010086873 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 87403 12958 QTDQMVFNAY True H1975_Epitope_Rep1 1215.52302368387 1215.52192993586 54.918 2 0.1941239890484636 0.0006801564359802754 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 132477 9904 VYPDGIRHI True PC9_epitope_Rep1 1068.5716285587998 1068.5705299358601 42.953 2 0.19411182361131984 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 28460 13381 FSEQGINEFLR True NCI_RA007_Epitope_Rep2 1338.6568147347398 1338.6557099358602 56.689 2 0.19410412049532316 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 140705 20443 YYQEYPMSI True PC9_epitope_Rep5 1192.5110620178398 1192.50996993586 83.671 2 0.19410221823954488 0.0006801564359802754 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 132173 8153 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 40.904 3 0.1941016937926722 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 74083 10262 NHVASDISL True PC9_epitope_Rep2 954.47705946762 954.47596993586 44.806 2 0.19410072035712084 0.0006801564359802754 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 2090 11926 AELNAQIITA True H1975_Epitope_Rep1 1042.56587447202 1042.56476993586 50.876 2 0.1940920603149462 0.0006801564359802754 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 88336 20503 QYLQDAYSF True PC9_epitope_Rep3 1133.5029398622898 1133.50184993586 84.125 2 0.19408646320455963 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 119088 4908 VEHSDLSFSK True NCI_RA007_Epitope_Rep5 1147.5509526838698 1147.54930490379 25.571 3 0.19408337410728865 0.0006801564359802754 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 31833 16500 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53274993586 68.686 2 0.1940802567346446 0.0006801564359802754 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 43522 20247 IIDGKIFCV True PC9_epitope_Rep1 1006.5521389841799 1006.55104993586 82.708 2 0.19407869328171945 0.0006801564359802754 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 40148 5644 HRDYETATL True PC9_epitope_Rep2 1104.51998690876 1104.5188899358602 27.093 2 0.19407027882633576 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 129903 5222 VTLTSEEEAR True NCI_RA007_Epitope_Rep4 1133.5564319871298 1133.55532993586 26.622 2 0.19406976049151278 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 17811 14382 EHYYNAISV True PC9_epitope_Rep3 1094.50327421546 1094.5021699358601 60.413 2 0.19406283363654814 0.0006801564359802754 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 135555 6417 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 29.606 2 0.19405828505541137 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 76242 12576 NSDELQELY True H1975_Epitope_Rep1 1109.48768372097 1109.4865899358601 53.42 2 0.19405505255143007 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160209|O00764-2|PDXK', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 117013 16222 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.5233099358602 67.535 2 0.19405462421896 0.0006801564359802754 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 37561 19064 GYPLWKVTF True PC9_epitope_Rep6 1109.59096702105 1109.5898699358602 85.974 2 0.19405416029222178 0.0006801564359802754 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 29723 18237 FVPIKVEQI True PC9_epitope_Rep5 1071.63283183303 1071.6317299358602 75.163 2 0.1940511502504597 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 9266 4037 AVQRTLLEK True NCI_RA007_Epitope_Rep5 1056.6291434349198 1056.6280499358602 21.953 2 0.19404113686775937 0.0006801564359802754 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 71815 15868 MPAFLSRASA True PC9_epitope_Rep1 1049.53280052193 1049.5317099358601 65.845 2 0.19403649027325032 0.0006801564359802754 0.9438714419765777 ['ENST00000603524.5_1_19:35610107-35610293:+|nuORF'] 116869 14806 TYNPAFSRL True PC9_epitope_Rep3 1067.53999407735 1067.5388899358602 62.085 2 0.1940346505148924 0.0006801564359802754 0.9438714419765777 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 70338 17458 LYPQFMFHL True NCI_RA007_Epitope_Rep5 1194.5895871220598 1194.58848993586 73.938 2 0.1940329103299239 0.0006801564359802754 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 27360 10774 FM[Oxidation]NTELAAFTK True H1975_Epitope_Rep3 1287.6169244491496 1287.6158299358601 46.524 2 0.19402563294812009 0.0006801564359802754 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 85009 10305 QIFNGTFVK True NCI_RA007_Epitope_Rep4 1052.5654805492 1052.5643899358602 46.494 2 0.19401967782759702 0.0006801564359802754 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF', 'ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 6720 14820 AQDEHLITF True PC9_epitope_Rep6 1072.5189242796 1072.5178299358602 68.976 2 0.19401939338770452 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 61696 21213 LLIDELNKL True PC9_epitope_Rep1 1069.63831113629 1069.63720993586 86.423 2 0.19401556107541312 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 37240 13169 GVVEVTHDL True PC9_epitope_Rep5 967.4974605590298 967.49636993586 55.659 2 0.19401190098129764 0.0006801564359802754 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 8203 12898 ATGSWDSFLK True NCI_RA007_Epitope_Rep5 1110.53457434374 1110.53346993586 56.295 2 0.19401096996482553 0.0006801564359802754 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 86943 14543 QRTDVLTGL True PC9_epitope_Rep3 1001.55055876105 1001.54946993586 61.06 2 0.193998479960079 0.0006801564359802754 0.9438714419765777 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 132255 20480 VYKVPPFTF True PC9_epitope_Rep5 1096.59571804832 1096.5946299358602 83.815 2 0.1939935292502309 0.0006801564359802754 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 135587 16514 YEELNVWQV True H1975_Epitope_Rep3 1178.5607890915799 1178.5596899358602 69.018 2 0.19399302985196626 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 32653 7846 GHLEKAVVL True PC9_epitope_Rep2 964.5705659296399 964.56946993586 35.549 2 0.19399098950196708 0.0006801564359802754 0.9438714419765777 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'ENSG00000134107|ENST00000256495|BHLHE40', 'ENSG00000123095|ENST00000242728|BHLHE41'] 138699 16953 YRVFTTQEL True PC9_epitope_Rep1 1155.5924235730297 1155.5913299358601 70.033 2 0.19398944993667674 0.0006801564359802754 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 74130 10832 NHVTPPNVSL True PC9_epitope_Rep6 1076.56145779792 1076.56036993586 52.519 2 0.1939868268205984 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 18283 9437 EITALAPSTM[Oxidation]K True PC9_epitope_Rep1 1176.6060254122801 1176.6049299358601 41.156 2 0.19398090364175602 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 132566 20534 VYPLMKEYF True PC9_epitope_Rep5 1188.5889184157197 1188.58782993586 84.026 2 0.19397789853279745 0.0006801564359802754 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 42618 7261 IETIEVM[Oxidation]EDR True H1975_Epitope_Rep3 1249.58601824369 1249.5849299358601 32.902 2 0.19397710103729648 0.0006801564359802754 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 104922 8999 STFSEIFKK True NCI_RA007_Epitope_Rep5 1085.57571087973 1085.57460993586 41.272 2 0.19394505927951425 0.0006801564359802754 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 28078 8061 FRDQNPEQL True PC9_epitope_Rep4 1145.5465360097699 1145.54542993586 38.458 2 0.19394265162498642 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 135171 6342 YASSANLHLPK True H1975_Epitope_Rep1 1199.62987171091 1199.62822490379 29.459 3 0.1939422024659446 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 53487 18552 KVLDILQHI True PC9_epitope_Rep4 1077.65462990677 1077.6535299358602 79.435 2 0.19394075608633443 0.0006801564359802754 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 140494 21245 YYIFIPSKF True PC9_epitope_Rep5 1176.6219327961599 1176.62082993586 86.769 2 0.19392861061151037 0.0006801564359802754 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 61227 20659 LLDPSVFHV True PC9_epitope_Rep1 1025.5545815123298 1025.5534899358602 84.286 2 0.19392832319584563 0.0006801564359802754 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 71562 7677 M[Oxidation]LDSHEELY True H1975_Epitope_Rep1 1151.48049054599 1151.4793899358601 34.497 2 0.19392144110817472 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 76283 10307 NSDPNLHLL True NCI_RA007_Epitope_Rep5 1021.5192586327701 1021.51816993586 46.276 2 0.19390606731364032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 135593 8283 YEELQSLAGK True H1975_Epitope_Rep3 1136.5713537752797 1136.5702499358601 36.844 2 0.1939056961244555 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 106847 22846 SYIDVLPEF True PC9_epitope_Rep2 1081.53317736141 1081.53208993586 93.367 2 0.1938920645291531 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 38611 17347 HHIPDVITYL True PC9_epitope_Rep6 1206.63970811862 1206.6386099358601 79.339 2 0.1938900793384713 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 15385 8681 EALQDVEDENQ True NCI_RA007_Epitope_Rep1 1288.5419041218 1288.5408099358601 37.769 2 0.19388480456927973 0.0006801564359802754 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000435487.1_1_7:56635601-56635700:-|nuORF'] 93854 20661 RVFSDIIYTV True PC9_epitope_Rep3 1211.65502382959 1211.65392993586 84.746 2 0.19388283919351 0.0006801564359802754 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 31956 5545 GESNRLLSA True NCI_RA007_Epitope_Rep3 945.4879585044899 945.48686993586 28.807 2 0.19386883003141098 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'nc|ENSG00000138698|P52306-6|RAP1GDS1'] 31242 5767 GDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep2 1156.47065413828 1156.4695499358602 27.049 2 0.19386692388054855 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 17714 17737 EHSLVIDTL True PC9_epitope_Rep3 1025.53932537101 1025.53822993586 73.423 2 0.19385755317329065 0.0006801564359802754 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 108429 6803 TEEGPTLSYGR True H1975_Epitope_Rep1 1208.567331024 1208.56622993586 31.21 2 0.19385333581309241 0.0006801564359802754 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 126701 7662 VPRPPDTVST True PC9_epitope_Rep2 1067.56112344475 1067.56002993586 34.842 2 0.1938522530863856 0.0006801564359802754 0.9438714419765777 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 67362 7703 LTDRGVMSY True H1975_Epitope_Rep3 1040.49608066004 1040.49498993586 34.612 2 0.19384839002947274 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 64556 18350 LRDGQILEL True PC9_epitope_Rep5 1055.59750895347 1055.59640993586 75.6 2 0.19384804199073755 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 104628 10281 SSVPGVRLLQ True NCI_RA007_Epitope_Rep5 1054.61349337078 1054.6123899358602 46.175 2 0.1938406673714901 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 27831 18086 FQIVNPHLL True PC9_epitope_Rep6 1079.61276509479 1079.6116699358602 82.205 2 0.19383770022381808 0.0006801564359802754 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 113745 6789 TRDPAQRVVL True PC9_epitope_Rep2 1153.6567551650899 1153.65511490379 31.521 3 0.1938342901057713 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 84843 14482 QHNDLEFKL True PC9_epitope_Rep5 1142.57202248162 1142.57038490379 60.706 3 0.1938273357377421 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 7827 9886 [Acetylation]-ATAEVLNIGKK True H1975_Epitope_Rep1 1184.6764878664596 1184.67538993586 42.96 2 0.19382311694258503 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 117092 16438 TYRNVMEQF True PC9_epitope_Rep1 1186.54409348162 1186.54298993586 68.052 2 0.19382111392427287 0.0006801564359802754 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 58573 3739 LFEGQETGKK True NCI_RA007_Epitope_Rep2 1135.5873381925899 1135.58569490379 19.187 3 0.19381811165430524 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1'] 112298 13684 TMAKESSIIGV True PC9_epitope_Rep5 1134.59546034814 1134.5943699358602 57.662 2 0.1938127627233346 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 102909 16101 SQIEADFRL True PC9_epitope_Rep6 1077.54547338061 1077.54436993586 74.268 2 0.1938046869038301 0.0006801564359802754 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 113882 8539 TRHPENWTL True PC9_epitope_Rep2 1152.56760580752 1152.56650993586 38.207 2 0.19379554765752363 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 113616 15371 TRDAGYGGLSL True PC9_epitope_Rep1 1108.5512870370399 1108.55018993586 63.942 2 0.19379337485206505 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 89775 10567 RFEEAHFTF True NCI_RA007_Epitope_Rep4 1182.5458077337796 1182.54470993586 47.491 2 0.19379109986984577 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 77406 19477 NYLVLPNRI True PC9_epitope_Rep3 1100.63422881536 1100.63312993586 80.148 2 0.19378979371720081 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 26038 21168 FHDHALMIIF True PC9_epitope_Rep5 1242.6219498795 1242.62029490379 86.472 3 0.19378894861601717 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 102007 4570 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 22.699 2 0.19378767429508137 0.0006801564359802754 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 102765 4191 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 22.487 2 0.1937860269736579 0.0006801564359802754 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 32076 10254 GEWPDQPRI True NCI_RA007_Epitope_Rep4 1096.53015766964 1096.5290699358602 46.297 2 0.19378156292487034 0.0006801564359802754 0.9438714419765777 ['ENSG00000187257|ENST00000334955|RSBN1L', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L'] 106901 23288 SYIPLFPQL True PC9_epitope_Rep5 1076.5906326678798 1076.5895299358601 94.561 2 0.1937805668660069 0.0006801564359802754 0.9438714419765777 ['ENSG00000165996|ENST00000361271|HACD1'] 136243 14897 YGQISEVVVVK True PC9_epitope_Rep5 1219.68123857743 1219.68014993586 62.304 2 0.19377596235411115 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 110727 10672 TKEVNSGFFY True H1975_Epitope_Rep1 1190.5607890915799 1190.5596899358602 46.008 2 0.19377540679394792 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 24225 7136 EYVRNQQTI True PC9_epitope_Rep5 1149.57783613805 1149.5767299358602 32.418 2 0.19376946083647514 0.0006801564359802754 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 104626 10473 SSVPGVRLLQ True NCI_RA007_Epitope_Rep4 1054.61349337078 1054.6123899358602 47.134 2 0.19376351857739205 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 139017 16404 YSHDGAFLAV True PC9_epitope_Rep5 1078.5083595959 1078.5072699358602 68.096 2 0.19375222867465305 0.0006801564359802754 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 131959 17002 VYFVAPAKF True PC9_epitope_Rep6 1040.5695033004797 1040.56840993586 77.95 2 0.193747518798673 0.0006801564359802754 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 123108 18651 VHAYIISSL True PC9_epitope_Rep3 1001.55458151233 1001.55348993586 76.959 2 0.19374243827324023 0.0006801564359802754 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 4306 19754 AILELDEHL True PC9_epitope_Rep3 1051.55497543515 1051.5538699358601 81.212 2 0.19373893695522718 0.0006801564359802754 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 116574 13114 TYGEIFEKF True NCI_RA007_Epitope_Rep3 1132.54407639828 1132.54357496793 58.864 1 0.1937319630618921 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 125699 9309 VNDGDMRLAD True PC9_epitope_Rep5 1104.48697252832 1104.4858699358601 40.76 2 0.19372982277786835 0.0006801564359802754 0.9438714419765777 ['ENSG00000108679|ENST00000262776|LGALS3BP'] 25151 12605 FDQLLAEEK True PC9_epitope_Rep3 1091.5498900547097 1091.5487899358602 53.507 2 0.1937296227527958 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 40727 12966 HTVEDLVKV True PC9_epitope_Rep1 1038.5709598524597 1038.5698699358602 54.745 2 0.19372671279156897 0.0006801564359802754 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 54662 8565 LADVNNIGKY True H1975_Epitope_Rep2 1105.57677350889 1105.57566993586 37.898 2 0.1937213812472344 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 75760 17529 NRALPLEL True PC9_epitope_Rep5 924.53926580136 924.53816993586 72.431 2 0.19371582479212374 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'PRR14L|p.P1996Qfs*42|1|0.37|ENSG00000183530|chr22:31703563-31703563|G/-|frameshift_variant', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 105144 15596 STLTEEGVIKV True PC9_epitope_Rep5 1174.64451871554 1174.64342993586 64.999 2 0.1937080409026704 0.0006801564359802754 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 131896 17990 VYEEILHQI True PC9_epitope_Rep4 1142.5971746003 1142.5960699358602 77.254 2 0.1937058620370251 0.0006801564359802754 0.9438714419765777 ['ENSG00000135842|ENST00000367511|NIBAN1'] 86323 21214 QQHSILLLL True PC9_epitope_Rep5 1063.6389798426299 1063.6378899358601 86.647 2 0.19370294635623825 0.0006801564359802754 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 96712 12186 SEQEHFLIV True H1975_Epitope_Rep2 1100.5502244078798 1100.54912993586 51.955 2 0.1937003823860009 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ADD1-FAM193A|4|fusion', 'ADD1-FAM193A|3|fusion', 'ADD1-FAM193A|1|fusion', 'ADD1-FAM193A|2|fusion', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 61226 14563 LLDPSVFHV True H1975_Epitope_Rep2 1025.5545815123298 1025.5534899358602 61.173 2 0.1936964612577791 0.0006801564359802754 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 91109 13993 RLMNDMTAV True PC9_epitope_Rep3 1049.49978614149 1049.49868993586 58.895 2 0.19369107266477242 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 91147 20783 RLPEIYIQL True PC9_epitope_Rep2 1143.66519459047 1143.6640899358601 85.385 2 0.19368741463067216 0.0006801564359802754 0.9438714419765777 ['EHD4|p.I335M|1|0.07|ENSG00000103966|chr15:41909783-41909783|G/C|missense_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 52177 8931 KMDDLNLHY True H1975_Epitope_Rep2 1147.53319444475 1147.53154490379 39.312 3 0.19368068413208425 0.0006801564359802754 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF', 'SPRYD3|p.N13K|1|0.38|ENSG00000167778|chr12:53077246-53077246|G/T|missense_variant'] 140581 19026 YYLTDVDRI True PC9_epitope_Rep3 1156.5764391557198 1156.57534993586 78.405 2 0.1936693196977779 0.0006801564359802754 0.9438714419765777 ['ENSG00000088256|ENST00000078429|GNA11'] 118306 12243 VDDGLISLQVK True NCI_RA007_Epitope_Rep1 1185.6605031328502 1185.6594099358601 51.591 2 0.19365669077967448 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 44959 15062 IQHDLIFSL True NCI_RA007_Epitope_Rep5 1084.5916952970401 1084.5905899358602 64.603 2 0.1936563068179454 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 136638 16656 YIDKDLEYV True PC9_epitope_Rep5 1156.56520576568 1156.5641099358602 69.073 2 0.19365235807971903 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'ENST00000509067.1_1_5:31409161-31409425:-|nuORF'] 4185 11012 AIDEDVLRY True H1975_Epitope_Rep1 1092.54513902744 1092.5440499358601 47.318 2 0.19364720585107537 0.0006801564359802754 0.9438714419765777 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 105984 21089 SVLKELLQV True PC9_epitope_Rep1 1027.6277464525897 1027.62664993586 85.948 2 0.19364684391824355 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2'] 104981 9379 STIEYVIQR True NCI_RA007_Epitope_Rep1 1107.59242357303 1107.5913299358601 40.475 2 0.19363671047608072 0.0006801564359802754 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 103445 12541 SRAEDYEVL True PC9_epitope_Rep5 1080.50875351872 1080.5076499358602 53.238 2 0.19363584927945054 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 126720 7087 VPRQPTVTSV True PC9_epitope_Rep6 1082.60840799034 1082.60730993586 36.297 2 0.19362637589499773 0.0006801564359802754 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5'] 47563 23236 IYMDTLNIF True PC9_epitope_Rep5 1128.5525329069999 1128.5514299358601 94.361 2 0.19361623812986764 0.0006801564359802754 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 63609 8998 LPLQDVYK True H1975_Epitope_Rep1 974.5436824754598 974.54258993586 39.517 2 0.19361440279585565 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000514975.1_1_4:106406529-106406643:+|nuORF', 'ENST00000359165.5_1_12:19609713-19609968:-|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 115472 19932 TVFTDHMLTV True PC9_epitope_Rep1 1162.5692456002998 1162.5681499358602 81.489 2 0.19361212928094745 0.0006801564359802754 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 104898 8267 STFNQVVLK True NCI_RA007_Epitope_Rep5 1034.5760452328998 1034.57494993586 38.477 2 0.19360704487459934 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 9873 20852 AYMPHTFFI True PC9_epitope_Rep5 1125.53173789277 1125.53064993586 85.257 2 0.19360669987609191 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 128462 5650 VSESHGQLSY True H1975_Epitope_Rep3 1105.50400249145 1105.50290993586 26.763 2 0.19360649058552878 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164164|Q01804-5|OTUD4', 'nc|ENSG00000164164|Q01804-3|OTUD4', 'ENSG00000164164|ENST00000447906|OTUD4', 'ENST00000237841.5_1_12:3950645-3951302:+|nuORF'] 47909 20566 IYVPDIRNVF True PC9_epitope_Rep4 1234.6710082469 1234.66990993586 87.258 2 0.1936049074202715 0.0006801564359802754 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6'] 11588 8508 DGYDYDGYR True NCI_RA007_Epitope_Rep1 1122.42541781758 1122.4243299358602 37.094 2 0.19360334962911704 0.0006801564359802754 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 47908 21268 IYVPDIRNVF True PC9_epitope_Rep2 1234.6710082469 1234.66990993586 87.267 2 0.1936011013087347 0.0006801564359802754 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6'] 101126 12160 [Acetylation]-SLVIPEKFQH True H1975_Epitope_Rep1 1238.66592318276 1238.66482993586 51.791 2 0.193593491183169 0.0006801564359802754 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 37960 8274 HEFGRLLST True NCI_RA007_Epitope_Rep4 1058.55089311422 1058.5497899358602 38.635 2 0.19359158124450807 0.0006801564359802754 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'ENST00000478436.1_1_3:145794517-145794673:-|nuORF', 'nc|ENSG00000152952|O00469-3|PLOD2'] 81483 23203 PQPDVFPLF True PC9_epitope_Rep5 1058.54368247546 1058.5425899358602 94.231 2 0.19358996809947232 0.0006801564359802754 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 120162 11909 VFLENVIR True NCI_RA007_Epitope_Rep5 988.5705659296399 988.56946993586 52.466 2 0.19358578679323415 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 105663 9929 SVFSKYFER True NCI_RA007_Epitope_Rep3 1161.5818588893299 1161.58021490379 46.138 3 0.19358103035126506 0.0006801564359802754 0.9438714419765777 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 59613 12677 LGSFLYEYSR True NCI_RA007_Epitope_Rep2 1233.6029882567298 1233.60188993586 53.925 2 0.19357919659225778 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 53584 2623 KVVDSLYNK True NCI_RA007_Epitope_Rep5 1064.5866099165999 1064.58550993586 14.776 2 0.19357876916209607 0.0006801564359802754 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'ENST00000585265.1_1_17:30807457-30807646:+|nuORF'] 42022 9334 IEDTRYTLP True H1975_Epitope_Rep3 1106.56078909158 1106.5596899358602 40.901 2 0.19357697933728837 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant'] 49368 19824 KIIDEDGLLNL True PC9_epitope_Rep4 1241.68671788069 1241.68562993586 84.381 2 0.1935763059241436 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 28086 21683 FRDYFPIQL True PC9_epitope_Rep1 1197.6182443980497 1197.6171499358602 88.231 2 0.19357566261422207 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 94494 9807 RYIANTVEL True NCI_RA007_Epitope_Rep1 1077.58185888933 1077.5807699358602 42.15 2 0.19357201677824232 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 67519 15595 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.5746699358601 65.142 2 0.19357151938880462 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 114814 19630 TTDFIFNLY True H1975_Epitope_Rep1 1132.54407639828 1132.54357496793 81.719 1 0.19356116381981653 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 34367 4509 GPSSVEDIK True NCI_RA007_Epitope_Rep5 930.4658260775799 930.46472993586 23.995 2 0.1935602600137001 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 118219 8754 VAYGKGTYF True H1975_Epitope_Rep2 1004.4967322830399 1004.49562993586 38.636 2 0.19355921208414933 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 125157 21335 VLPVRYFYL True PC9_epitope_Rep3 1168.6644663144798 1168.6633699358601 87.36 2 0.1935575873405972 0.0006801564359802754 0.9438714419765777 ['ENSG00000178202|ENST00000323468|POGLUT3'] 700 11185 AAVGFPTHL True H1975_Epitope_Rep2 911.48650195251 911.48540993586 48.061 2 0.19355198619973563 0.0006801564359802754 0.9438714419765777 ['ENSG00000177352|ENST00000321895|CCDC71'] 52506 12568 KPNPNQIISV True PC9_epitope_Rep5 1108.62405805448 1108.62296993586 53.342 2 0.19355189348621477 0.0006801564359802754 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 41971 9836 IEDFEARIA True H1975_Epitope_Rep1 1062.53457434374 1062.53346993586 42.765 2 0.19355102625612572 0.0006801564359802754 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 55973 14897 LDIDSPPITAR True PC9_epitope_Rep2 1196.6401020414398 1196.63900993586 62.567 2 0.19354356700024125 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 31340 8599 GEALASISHVA True H1975_Epitope_Rep3 1053.54547338061 1053.54436993586 38.068 2 0.19354153450253198 0.0006801564359802754 0.9438714419765777 ['ENSG00000076242|ENST00000231790|MLH1', 'ENST00000539477.5_1_3:37035370-37053334:+|nuORF', 'ENST00000466900.5_1_3:37035370-37047454:+|nuORF'] 86841 14837 QRQDIAFAY True PC9_epitope_Rep3 1110.5458077337798 1110.54470993586 62.207 2 0.19353939875862086 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 107022 13931 SYLNSVQRL True PC9_epitope_Rep2 1078.5771078620598 1078.5760099358602 58.864 2 0.1935357465086498 0.0006801564359802754 0.9438714419765777 ['ENSG00000136243|ENST00000258742|NUP42', 'nc|ENSG00000136243|O15504-2|NUP42'] 116948 16831 TYPIKTPTF True PC9_epitope_Rep1 1066.5698972233001 1066.5688099358601 69.565 2 0.19352853387437632 0.0006801564359802754 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 18286 8883 EITALAPSTM[Oxidation]K True PC9_epitope_Rep2 1176.6060254122801 1176.6049299358601 39.521 2 0.19352742328963818 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 52755 16986 KQMEQISQFL True PC9_epitope_Rep6 1250.6329084860197 1250.63180993586 77.886 2 0.19352600347037985 0.0006801564359802754 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 84593 17963 QHDPETSVLVL True PC9_epitope_Rep1 1236.635016661 1236.6339099358602 73.888 2 0.19351156597131267 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 89670 4912 REVEHFLKA True H1975_Epitope_Rep3 1127.60874234351 1127.60710490379 24.021 3 0.19351003993934618 0.0006801564359802754 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 28356 5915 FSDGTHGGLRY True H1975_Epitope_Rep2 1208.55743504664 1208.55632993586 27.738 2 0.1935081447285328 0.0006801564359802754 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 10040 9441 AYVEKVERL True PC9_epitope_Rep1 1105.6131590176099 1105.61206993586 41.172 2 0.19350558436757048 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 4297 14871 AIKEILTQV True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 65.14 2 0.19350407189549623 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1'] 7814 6199 ATADLALGR True NCI_RA007_Epitope_Rep3 886.4872302284999 886.48612993586 31.391 2 0.1935035434843769 0.0006801564359802754 0.9438714419765777 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160056-49160527:-|nuORF'] 105403 19235 SVADYFKQI True PC9_epitope_Rep4 1069.54441075145 1069.54387496793 82.087 1 0.19349478369065537 0.0006801564359802754 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 37510 10435 GYIERPQLI True NCI_RA007_Epitope_Rep3 1087.6025943339098 1087.6014899358602 48.111 2 0.19348511712945407 0.0006801564359802754 0.9438714419765777 ['ENSG00000164329|ENST00000453514|TENT2', 'nc|ENSG00000164329|Q6PIY7-2|TENT2'] 113483 9924 TQSEKQLVL True PC9_epitope_Rep1 1044.58152453616 1044.5804299358601 43.032 2 0.19347998343915165 0.0006801564359802754 0.9438714419765777 ['ENSG00000128567|ENST00000378555|PODXL', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENST00000446198.5_1_7:131189072-131193853:-|nuORF'] 31732 9094 GEIVRLTTP True NCI_RA007_Epitope_Rep4 984.56039516876 984.55928993586 41.816 2 0.19347383384439515 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000597253.5_1_19:4688763-4694742:-|nuORF'] 138765 10628 YSDASGFGY True H1975_Epitope_Rep3 965.37667672001 965.3761249679301 45.951 1 0.19346862994119116 0.0006801564359802754 0.9438714419765777 ['ENSG00000090006|ENST00000396819|LTBP4', 'nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4'] 99980 17593 SLIRNLEQL True PC9_epitope_Rep6 1084.62405805448 1084.62296993586 80.313 2 0.1934646216357346 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 14016 21237 DRYQYPFVL True PC9_epitope_Rep1 1199.5975089534697 1199.59640993586 86.512 2 0.19346287632729722 0.0006801564359802754 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2', 'SGPP2|p.M182I|1|0.33|ENSG00000163082|chr2:222521934-222521934|G/A|missense_variant'] 64530 6639 LRDEHNYTL True PC9_epitope_Rep2 1159.56218607391 1159.56055490379 30.946 3 0.19345312112118423 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 24731 10929 FAYDGKDYL True NCI_RA007_Epitope_Rep4 1090.4971262058598 1090.4960299358602 48.9 2 0.19344547878043308 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 114133 6409 TRSITNTTV True PC9_epitope_Rep3 991.52982331647 991.52872993586 29.677 2 0.1934453464279679 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 39796 20313 HQDSTWIVL True PC9_epitope_Rep3 1097.55055876105 1097.54946993586 83.382 2 0.19344302860626558 0.0006801564359802754 0.9438714419765777 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 74832 9416 NLPLPPPPPPR True H1975_Epitope_Rep1 1193.6920780446499 1193.6909899358602 41.132 2 0.19342604073831537 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 109646 6821 THDQAVQAL True PC9_epitope_Rep1 981.4879585044899 981.48686993586 31.043 2 0.19341699158955122 0.0006801564359802754 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 52752 17987 KQMEQISQFL True PC9_epitope_Rep4 1250.6329084860197 1250.63180993586 77.241 2 0.19341533815070047 0.0006801564359802754 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 72127 16278 MRENQITISL True PC9_epitope_Rep4 1203.6281574587497 1203.6270699358602 70.57 2 0.1934120990476152 0.0006801564359802754 0.9438714419765777 ['ENST00000264779.6_1_5:56531811-56531844:+|nuORF'] 21157 14424 ERDVSLTSL True PC9_epitope_Rep5 1018.5294889633 1018.52838993586 60.481 2 0.19340777338574885 0.0006801564359802754 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 43121 10283 IGNLNTLVVK True NCI_RA007_Epitope_Rep1 1069.64954452633 1069.64844993586 44.006 2 0.1934070554251891 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1'] 116986 14781 TYPQLEGFKF True NCI_RA007_Epitope_Rep5 1228.6128246644396 1228.61172993586 63.528 2 0.19340495063129104 0.0006801564359802754 0.9438714419765777 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 36598 19419 GVLKEGFLV True PC9_epitope_Rep5 960.5644179200399 960.56332993586 79.743 2 0.19340270623259376 0.0006801564359802754 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2', 'ENST00000557388.1_1_14:67864733-67878776:-|nuORF'] 104842 8131 STELNHLGY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 36.225 2 0.193399388001476 0.0006801564359802754 0.9438714419765777 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 105513 13452 SVDEYQVGQLY True H1975_Epitope_Rep2 1299.59829679911 1299.5971899358601 56.877 2 0.19338899907414636 0.0006801564359802754 0.9438714419765777 ['PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion', 'ENSG00000174238|ENST00000313486|PITPNA'] 106192 15071 SVPIDLQKV True PC9_epitope_Rep3 997.58079626017 997.57968993586 63.105 2 0.1933876684002122 0.0006801564359802754 0.9438714419765777 ['ENSG00000198056|ENST00000338193|PRIM1'] 5209 18486 ALPSKLPTF True PC9_epitope_Rep5 972.56441792004 972.56332993586 76.13 2 0.193381953404027 0.0006801564359802754 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 111161 8112 TLETVPLER True H1975_Epitope_Rep1 1056.5815245361598 1056.5804299358601 36.147 2 0.19338061064755854 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1'] 40705 7670 HTQGPVDGSLY True H1975_Epitope_Rep3 1172.5462016565998 1172.5451099358602 34.485 2 0.19338012044184996 0.0006801564359802754 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 98160 6238 SIDDQSQQSY True H1975_Epitope_Rep2 1169.4836609696902 1169.48256993586 28.953 2 0.19337850944233315 0.0006801564359802754 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 72302 5132 MSEEHTAVY True H1975_Epitope_Rep3 1065.44371073401 1065.4426099358602 24.844 2 0.19337594178690984 0.0006801564359802754 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 45078 8032 IQRQETISL True NCI_RA007_Epitope_Rep4 1086.6033226099 1086.6022299358601 37.661 2 0.1933736082690159 0.0006801564359802754 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1', 'MX1|p.V216L|1|0.36|ENSG00000157601|chr21:41440941-41440941|G/T|missense_variant'] 47824 20892 IYSIDFTRF True PC9_epitope_Rep2 1160.5866099165999 1160.58550993586 85.804 2 0.19336085825262542 0.0006801564359802754 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B'] 75360 13470 NQDDSILKV True PC9_epitope_Rep1 1030.5294889632999 1030.52838993586 56.67 2 0.19336082838943805 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 17450 20332 EHGIVVFSL True PC9_epitope_Rep2 999.5389314481899 999.53782993586 83.629 2 0.1933488384109521 0.0006801564359802754 0.9438714419765777 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 14367 11795 DTEKELQALY True H1975_Epitope_Rep1 1208.59248314268 1208.5913899358602 50.361 2 0.19334696691529019 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 6776 13041 AQEYEALLNIK True NCI_RA007_Epitope_Rep1 1290.6819668534197 1290.68086993586 54.718 2 0.1933328178205625 0.0006801564359802754 0.9438714419765777 ['CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 107329 22643 SYRELFEFF True PC9_epitope_Rep5 1236.5815245361598 1236.5804299358601 92.097 2 0.1933185384538912 0.0006801564359802754 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 104865 15021 STEQIPILY True H1975_Epitope_Rep3 1062.5597264624198 1062.5586299358602 63.169 2 0.19331440818224785 0.0006801564359802754 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 29406 21751 FVFPGELLL True H1975_Epitope_Rep2 1033.5848190114498 1033.5837299358602 89.972 2 0.19330688766874538 0.0006801564359802754 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 33863 23592 GLVPFLVSV True PC9_epitope_Rep1 929.5586042636099 929.55750993586 95.535 2 0.1933066393141394 0.0006801564359802754 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 72409 15117 MTELPAPLSY True H1975_Epitope_Rep2 1120.5474475265598 1120.5468749679299 63.301 1 0.19330511805740058 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 74110 12738 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 53.872 2 0.19329112794251493 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 54262 17729 KYPKVWEGF True PC9_epitope_Rep1 1152.59678067748 1152.59568993586 72.992 2 0.19328895629456358 0.0006801564359802754 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 5366 8371 ALTPDETYVPK True H1975_Epitope_Rep1 1232.6288686514001 1232.6277699358602 37.126 2 0.19328317295211145 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 8541 7521 ATYILEAGK True NCI_RA007_Epitope_Rep4 964.5229470308799 964.52184993586 35.574 2 0.1932823980587398 0.0006801564359802754 0.9438714419765777 ['ENST00000463409.6_1_10:22605382-22615407:+|nuORF', 'ENSG00000148444|ENST00000376836|COMMD3', 'ENST00000472673.5_1_10:22606461-22607284:+|nuORF', 'ENST00000483684.1_1_10:22606823-22607748:+|nuORF', 'ENST00000496071.5_1_10:22605382-22607284:+|nuORF', 'ENST00000479958.6_1_10:22605346-22607121:+|nuORF', 'ENST00000602574.5_1_10:22605346-22607236:+|nuORF', 'ENST00000470045.1_1_10:22605346-22607030:+|nuORF'] 44960 21020 IQHDLIFSL True PC9_epitope_Rep1 1084.5916952970401 1084.5905899358602 85.681 2 0.1932795117049527 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 106922 10054 SYISRTNQL True PC9_epitope_Rep3 1080.5563724174801 1080.55526993586 43.629 2 0.19327313257151807 0.0006801564359802754 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 103614 12538 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.60010993586 56.047 2 0.19327295791294455 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 40377 18380 HRTEMDWVL True PC9_epitope_Rep1 1185.5600778989299 1185.55843490379 75.489 3 0.1932721950250821 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 86110 10642 QPQPQPYAV True PC9_epitope_Rep4 1026.5134449763398 1026.5123499358601 48.684 2 0.19326644773096868 0.0006801564359802754 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 89058 8739 REEGPYEVEV True H1975_Epitope_Rep3 1205.55643198713 1205.55532993586 38.618 2 0.19324716871952208 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 105592 9940 SVEERITQV True PC9_epitope_Rep2 1059.5560380643099 1059.5549499358601 43.564 2 0.19324566179122218 0.0006801564359802754 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 135603 6610 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep1 1078.5004977145798 1078.49940993586 30.481 2 0.19324197718552533 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 129209 4530 VTDKSMVDKY True H1975_Epitope_Rep2 1184.5747249035599 1184.57308490379 22.535 3 0.19323895568935914 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 8577 11606 AVAEEVNAILK True NCI_RA007_Epitope_Rep2 1155.6499384491499 1155.6488499358602 49.736 2 0.19323082388184037 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2', 'nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 28074 8383 FRDQNPEQL True PC9_epitope_Rep2 1145.5465360097699 1145.54542993586 37.617 2 0.1932285063773166 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 71289 16494 MHAETAFESL True PC9_epitope_Rep3 1134.5015599633 1134.50046993586 68.581 2 0.19322434792690135 0.0006801564359802754 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 52602 16201 KQADPFASL True PC9_epitope_Rep3 975.5025459394699 975.50144993586 67.456 2 0.19322163722168453 0.0006801564359802754 0.9438714419765777 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 84722 18823 QHFNGLLEI True PC9_epitope_Rep4 1069.55564414149 1069.5545499358602 80.488 2 0.19322119050730288 0.0006801564359802754 0.9438714419765777 ['TNPO3|p.V807*|1|0.18|ENSG00000064419|chr7:128972437-128972437|C/-|frameshift_variant', 'nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3'] 88918 8182 REDDLNVSV True H1975_Epitope_Rep2 1045.50400249145 1045.50290993586 36.423 2 0.19322110502336012 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'BBS9|p.V734*|1|0.27|ENSG00000122507|chr7:33505546-33505546|G/-|frameshift_variant', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9'] 131782 5239 VYAHIYHQHF True NCI_RA007_Epitope_Rep3 1313.6305404172501 1313.62888490379 27.613 3 0.1932157699766518 0.0006801564359802754 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A', 'ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 65075 10048 LSDLGRLSY True H1975_Epitope_Rep3 1022.53965972418 1022.53856993586 43.685 2 0.1932063578031313 0.0006801564359802754 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 28430 4989 FSEENHEPLR True NCI_RA007_Epitope_Rep2 1256.5785644140399 1256.57692490379 24.029 3 0.19320585154504707 0.0006801564359802754 0.9438714419765777 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF'] 8791 6654 AVFDGAQVTSK True NCI_RA007_Epitope_Rep5 1121.57168812845 1121.5705899358602 32.264 2 0.19320237515123034 0.0006801564359802754 0.9438714419765777 ['ENSG00000175274|ENST00000525680|TP53I11'] 4366 18330 AIQDKLFQV True PC9_epitope_Rep2 1060.59169529704 1060.5905899358602 75.835 2 0.19319821926047073 0.0006801564359802754 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 4205 11693 AIDQLHLEY True H1975_Epitope_Rep1 1100.5502244078798 1100.54912993586 49.968 2 0.19319710538870252 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 116583 20140 TYGEIFEKF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 82.298 2 0.19318173131736657 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 14825 16833 DYDSVFHHL True PC9_epitope_Rep5 1131.4985231881901 1131.49687490379 69.757 3 0.19318075280899916 0.0006801564359802754 0.9438714419765777 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 45877 10658 ISQSGDFLRY True H1975_Epitope_Rep2 1184.5825871653199 1184.5814899358602 46.02 2 0.19317935507974454 0.0006801564359802754 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000489038.5_1_7:33016023-33032371:+|nuORF', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 38041 5840 HEKQVYDIAA True H1975_Epitope_Rep3 1172.5825871653199 1172.5814899358602 27.478 2 0.193178580612451 0.0006801564359802754 0.9438714419765777 ['ENSG00000018510|ENST00000264167|AGPS'] 104175 4264 SSDAHTSYY True H1975_Epitope_Rep3 1029.40395409701 1029.40284993586 21.519 2 0.19317533147557103 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 32662 6893 GHLKVVQSL True NCI_RA007_Epitope_Rep4 979.5814649665099 979.58036993586 33.132 2 0.19316847694079325 0.0006801564359802754 0.9438714419765777 ['ENSG00000145780|ENST00000274457|FEM1C'] 92215 20063 RQIDQFLVV True PC9_epitope_Rep1 1116.62914343492 1116.6280499358602 81.998 2 0.19316765912864234 0.0006801564359802754 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 103309 10070 SQTTVYEKL True PC9_epitope_Rep5 1067.54989005471 1067.5487899358602 43.715 2 0.19316322136360514 0.0006801564359802754 0.9438714419765777 ['ENSG00000118193|ENST00000367350|KIF14'] 35641 13481 GTMEWIMIK True NCI_RA007_Epitope_Rep3 1107.54567370475 1107.5445699358602 60.318 2 0.19316127922824866 0.0006801564359802754 0.9438714419765777 ['ENSG00000168273|ENST00000477703|UQCC5'] 54228 22082 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 89.75 2 0.19315794442012027 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 84092 8869 QEQFNSIAA True H1975_Epitope_Rep1 1006.4719740871798 1006.47147496793 39.027 1 0.19314277353412704 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 7497 10206 ASEFGNHYLY True H1975_Epitope_Rep3 1199.52473793603 1199.52364993586 44.302 2 0.19313607665425736 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3'] 117141 16209 TYSPALNKMF True PC9_epitope_Rep6 1170.5743309807401 1170.5732299358601 74.701 2 0.19313427975219272 0.0006801564359802754 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 137342 19375 YLKDLIEEV True PC9_epitope_Rep4 1120.6015912743999 1120.6004899358602 82.636 2 0.19313044293608864 0.0006801564359802754 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 138561 19845 YRPETGSWVF True PC9_epitope_Rep1 1240.58767254576 1240.58656993586 81.15 2 0.19312634389886188 0.0006801564359802754 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 47910 19408 IYVPDIRNVF True PC9_epitope_Rep6 1234.6710082469 1234.66990993586 87.309 2 0.19312627861050105 0.0006801564359802754 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6'] 75418 14414 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.5279899358602 63.352 2 0.19312359050955719 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 31160 16469 GDEELDSLIK True PC9_epitope_Rep2 1117.5502839775297 1117.54918993586 68.588 2 0.1931217042612711 0.0006801564359802754 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 6733 19750 AQDFRVLYV True PC9_epitope_Rep3 1109.58694426977 1109.58584993586 81.196 2 0.19311697619772478 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF'] 32906 10734 GINVTDFTR True NCI_RA007_Epitope_Rep1 1021.51925863277 1021.51816993586 45.745 2 0.19311010256984754 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'MYH9|p.L377F|1|0.27|ENSG00000100345|chr22:36318305-36318305|G/A|missense_variant', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 47629 18385 IYPEVVHMF True PC9_epitope_Rep6 1133.5579526406098 1133.55684993586 83.362 2 0.19310346699681663 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 129256 10268 VTDPSTLEQY True H1975_Epitope_Rep1 1151.53463391339 1151.53352993586 44.44 2 0.19310205048080298 0.0006801564359802754 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 132649 15839 VYQLRFQFL True NCI_RA007_Epitope_Rep3 1212.6655289436396 1212.6644299358602 69.933 2 0.19309835051405477 0.0006801564359802754 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 25877 7564 FGHYQQAEL True NCI_RA007_Epitope_Rep3 1091.50360856863 1091.5025099358602 36.877 2 0.19309322964421533 0.0006801564359802754 0.9438714419765777 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000535641.5_1_12:121766117-121773388:-|nuORF', 'ENST00000535472.5_1_12:121764442-121775147:-|nuORF', 'ENST00000545218.5_1_12:121756099-121775126:-|nuORF'] 9231 9586 AVQEFGLARFK True NCI_RA007_Epitope_Rep5 1264.6928063206399 1264.69117490379 43.517 3 0.19308922333842526 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 113789 15038 TRDSLPVSL True PC9_epitope_Rep2 986.53965972418 986.53856993586 63.099 2 0.19308579032855833 0.0006801564359802754 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 105994 12429 SVLKSIQEV True PC9_epitope_Rep4 1001.57571087973 1001.5746099358599 55.611 2 0.19308154223243376 0.0006801564359802754 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 17515 12610 EHINEGETAML True PC9_epitope_Rep1 1242.55505208814 1242.5539499358601 53.372 2 0.19307860091739668 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 83485 13090 QDGQFSVLFTK True H1975_Epitope_Rep3 1268.6401020414398 1268.63900993586 55.593 2 0.19307790541583547 0.0006801564359802754 0.9438714419765777 ['CON__P12763'] 54833 9446 LAFSRPSQL True H1975_Epitope_Rep1 1017.5607295219299 1017.55962993586 41.25 2 0.1930775214481648 0.0006801564359802754 0.9438714419765777 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 54369 11307 KYQIINEEF True NCI_RA007_Epitope_Rep4 1182.5920892198599 1182.59098993586 50.388 2 0.19307480235297902 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 39139 6557 HLDTLTEHY True H1975_Epitope_Rep2 1127.52473793603 1127.52364993586 30.133 2 0.19307352068162031 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 104764 4409 STDPAAPNLK True NCI_RA007_Epitope_Rep3 1012.5189242796 1012.51782993586 24.123 2 0.19307198109840532 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 89636 6217 RETQNLQVP True NCI_RA007_Epitope_Rep3 1083.5672714543498 1083.5661699358602 31.461 2 0.1930705818524214 0.0006801564359802754 0.9438714419765777 ['ENSG00000170464|ENST00000302060|DNAJC18'] 106577 9065 SVYDSVLQK True NCI_RA007_Epitope_Rep1 1037.5393253710097 1037.53822993586 39.264 2 0.1930685291202433 0.0006801564359802754 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 40346 8124 HRTDSEIAL True PC9_epitope_Rep3 1040.5250722892 1040.5239699358601 36.225 2 0.19306823270972479 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 100254 20012 SLLQTLYKV True PC9_epitope_Rep2 1063.62774645259 1063.62664993586 82.38 2 0.19305393904287735 0.0006801564359802754 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 29092 10281 FTQGHIVEV True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 50.235 2 0.19303844484106783 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 116530 18710 TYEGIFKTL True PC9_epitope_Rep4 1070.56481184286 1070.56370993586 80.047 2 0.19303391478638068 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 21339 19591 ERLGQFMTL True PC9_epitope_Rep2 1093.55901526977 1093.5579099358602 80.739 2 0.19302232548594334 0.0006801564359802754 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 140227 12496 YWMHVQNTF True NCI_RA007_Epitope_Rep5 1224.53861417836 1224.53750993586 54.723 2 0.19302225150863292 0.0006801564359802754 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 127241 21718 VQIPFFAKL True PC9_epitope_Rep1 1061.62735252977 1061.6262499358602 88.371 2 0.19302011132362415 0.0006801564359802754 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD'] 132129 6688 VYISEHEHF True NCI_RA007_Epitope_Rep3 1159.5298233164701 1159.5281849037901 33.388 3 0.1930190592802405 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 128465 6363 VSESSDVLPK True NCI_RA007_Epitope_Rep1 1059.54480467427 1059.54370993586 28.777 2 0.1930116567494103 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 96924 4098 SETSGIARP True NCI_RA007_Epitope_Rep4 916.4614094034799 916.46030993586 22.039 2 0.19300942112321384 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 139237 11126 YTAEPVTL True H1975_Epitope_Rep2 892.45419876472 892.4536549679301 47.831 1 0.19300790033409768 0.0006801564359802754 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENST00000482611.5_1_10:103552686-103559078:-|nuORF', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 47648 11501 IYPPKLHQF True PC9_epitope_Rep2 1141.62841515893 1141.62676490379 49.562 3 0.19300432673663556 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 104098 21230 SRVPLLLPL True PC9_epitope_Rep5 1006.65390163078 1006.65280993586 86.711 2 0.19299658992273436 0.0006801564359802754 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 129313 14459 VTDSGPTFNYL True H1975_Epitope_Rep2 1212.56626839484 1212.56516993586 60.772 2 0.19299599614312185 0.0006801564359802754 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 110088 18862 TIAEGLTLAQV True PC9_epitope_Rep6 1114.62338934814 1114.6222899358602 85.202 2 0.19299314716744967 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 132495 12379 VYPEKLATKF True PC9_epitope_Rep5 1194.6648602372995 1194.66322490379 52.612 3 0.19299295359616678 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 54332 6791 KYQEVTNNL True NCI_RA007_Epitope_Rep2 1107.5560380643099 1107.5549499358601 31.032 2 0.1929922966785272 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 7093 5451 AQYEDIANR True NCI_RA007_Epitope_Rep5 1078.5043368446197 1078.5032299358602 27.654 2 0.19299196259408694 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 72875 9673 NASEHIVYL True H1975_Epitope_Rep2 1044.5240096600398 1044.52290993586 42.188 2 0.19297844573229203 0.0006801564359802754 0.9438714419765777 ['ENSG00000117000|ENST00000372771|RLF'] 94523 20472 RYIDRIHIFF True PC9_epitope_Rep3 1378.7509899031 1378.74934490379 84.003 3 0.1929712586318396 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 132808 20516 VYSRTFTWL True PC9_epitope_Rep1 1171.6025943339098 1171.6014899358602 83.725 2 0.19296703894660383 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 132899 14368 VYTTMAEHF True PC9_epitope_Rep3 1097.48518162317 1097.48408993586 60.359 2 0.19296435971868078 0.0006801564359802754 0.9438714419765777 ['ENSG00000117472|ENST00000372003|TSPAN1'] 103539 16286 SRDDNMFQI True PC9_epitope_Rep4 1124.49205790876 1124.4909699358602 70.6 2 0.19296289166903752 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 47072 17643 IVVDNVPQV True PC9_epitope_Rep2 981.5494961318899 981.54838993586 73.144 2 0.19295996546317395 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 107532 10912 TADHNLLLY True H1975_Epitope_Rep2 1058.53965972418 1058.53856993586 47.004 2 0.19295726412925457 0.0006801564359802754 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 103628 12972 SRDKTIIMW True PC9_epitope_Rep6 1148.60121443492 1148.60010993586 61.464 2 0.1929535290814172 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 90350 16993 RIIDVVYNA True PC9_epitope_Rep5 1061.58694426977 1061.58584993586 70.383 2 0.19295173649488917 0.0006801564359802754 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 85122 7110 QISEVVVVK True NCI_RA007_Epitope_Rep3 999.5964463243099 999.59534993586 35.085 2 0.19294844569321024 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 96609 5747 SEM[Oxidation]EVQDAELK True NCI_RA007_Epitope_Rep2 1293.5758474828096 1293.5747499358602 26.972 2 0.19294133044117345 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF', 'ENST00000418595.1_1_6:112937907-112938114:-|nuORF'] 85157 20319 QIYDIFQKL True PC9_epitope_Rep4 1166.6335601090198 1166.6324699358602 86.299 2 0.1929356665943916 0.0006801564359802754 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 61215 19747 LLDPNVKSIFV True PC9_epitope_Rep4 1243.71762408615 1243.71652993586 84.08 2 0.19293382111278093 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3', 'ENSG00000117419|ENST00000372257|ERI3'] 9682 11913 AYHELAQVY True PC9_epitope_Rep2 1092.5240096600398 1092.52290993586 51.148 2 0.19293270353484698 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENSG00000141030|ENST00000268717|COPS3'] 35717 4927 GTSITVPQK True NCI_RA007_Epitope_Rep4 929.5181960036099 929.51708993586 25.414 2 0.1929285737991812 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134851|Q9HC07-2|TMEM165', 'ENST00000508404.5_1_4:56269487-56291616:+|nuORF', 'ENSG00000134851|ENST00000381334|TMEM165'] 115153 23004 TVADVVLWSV True PC9_epitope_Rep5 1087.59136094387 1087.59026993586 93.475 2 0.19291736241482146 0.0006801564359802754 0.9438714419765777 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 14969 21881 DYSDIVTTL True PC9_epitope_Rep5 1025.49170647225 1025.4906099358602 89.203 2 0.19291241149327792 0.0006801564359802754 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF', 'RAD21-EIF3H|4|fusion'] 140087 14223 YVPETVYRV True PC9_epitope_Rep1 1124.5866099165999 1124.58550993586 59.534 2 0.19290746800012554 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 60366 20980 LIIDEIHLL True PC9_epitope_Rep4 1077.64339651673 1077.6422899358602 88.861 2 0.19290111146320194 0.0006801564359802754 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3'] 38249 13793 HEYPWILSA True NCI_RA007_Epitope_Rep3 1114.54474510462 1114.54364993586 61.583 2 0.19289973885450007 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 135613 6094 YEENSHLTSV True H1975_Epitope_Rep1 1177.52513185885 1177.5240299358602 28.509 2 0.1928934181078272 0.0006801564359802754 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2'] 5229 11669 ALQEMVHQV True PC9_epitope_Rep2 1053.52771514149 1053.52660993586 50.215 2 0.19289050486202544 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 34805 12074 GQTLVVQFTVK True NCI_RA007_Epitope_Rep2 1218.6972229947398 1218.6961299358602 51.558 2 0.19287728023483 0.0006801564359802754 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 140718 15257 YYQGGKFQF True PC9_epitope_Rep2 1136.52909504048 1136.5279899358602 63.96 2 0.19286557316133135 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 31647 7877 GEHGLIIRV True NCI_RA007_Epitope_Rep5 992.57671393924 992.57560993586 36.993 2 0.19285992572015384 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 48451 6796 KEEEPSVKLP True H1975_Epitope_Rep2 1154.6183039676998 1154.61720993586 31.056 2 0.19284956223389504 0.0006801564359802754 0.9438714419765777 ['ENSG00000254505|ENST00000347519|CHMP4A', 'nc|ENSG00000254505|Q9BY43-2|CHMP4A'] 3192 5796 AGELTEDEVER True NCI_RA007_Epitope_Rep3 1246.5677249468197 1246.5666299358602 29.777 2 0.19284838948181288 0.0006801564359802754 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 8865 12070 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6965849037902 54.233 3 0.19284460917875604 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 59839 20427 LHEDFVVEL True PC9_epitope_Rep1 1099.55497543515 1099.5538699358601 83.387 2 0.1928437488602653 0.0006801564359802754 0.9438714419765777 ['ENSG00000116830|ENST00000369466|TTF2', 'nc|ENSG00000116830|Q9UNY4-2|TTF2'] 96078 7978 SEDEWTSQA True H1975_Epitope_Rep3 1051.40943340027 1051.40887496793 35.659 1 0.1928385375546493 0.0006801564359802754 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 135558 6705 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52838993586 30.703 2 0.19282382269478238 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 114293 8633 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.58478993586 39.99 2 0.1928218955164976 0.0006801564359802754 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 133521 16673 WHHTFYNEL True PC9_epitope_Rep1 1245.55670677065 1245.5550749037902 68.962 3 0.19282076962944872 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 112050 14532 TLTEEGVIKV True PC9_epitope_Rep2 1087.6124903112698 1087.6113899358602 61.169 2 0.19280578163587508 0.0006801564359802754 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 95980 12149 SEAEIFYNA True H1975_Epitope_Rep1 1042.46074069714 1042.4596499358602 51.748 2 0.1928053614597 0.0006801564359802754 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 29698 12109 FVNVVPTFGK True NCI_RA007_Epitope_Rep5 1106.6124307416198 1106.61132993586 53.232 2 0.1927996516678499 0.0006801564359802754 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 140169 7935 YVTIIDAPGHR True NCI_RA007_Epitope_Rep1 1240.6564208119198 1240.6553299358602 34.859 2 0.19279472401863101 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF'] 46386 10232 ITIFEKQEY True H1975_Epitope_Rep1 1169.5968402471299 1169.59574993586 44.301 2 0.19279005121419282 0.0006801564359802754 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 114023 14725 TRMPDGPVAL True PC9_epitope_Rep5 1055.54336520563 1055.54226993586 61.638 2 0.19278950792184457 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 116689 9869 TYITSVSRL True NCI_RA007_Epitope_Rep4 1038.57095985246 1038.5698699358602 44.808 2 0.19278806710934343 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 17321 16657 EHDPQYAVIL True PC9_epitope_Rep4 1183.5873381925899 1183.58624993586 72.037 2 0.19277953221761376 0.0006801564359802754 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 1929 5949 AEIPAGPGREP True H1975_Epitope_Rep1 1092.55637241748 1092.55526993586 27.954 2 0.1927765791654918 0.0006801564359802754 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF', 'ENST00000486701.1_1_2:27663271-27663376:+|nuORF'] 124312 13633 VLDNPSPFY True H1975_Epitope_Rep2 1050.5022115863 1050.5016749679298 57.578 1 0.19277266787098857 0.0006801564359802754 0.9438714419765777 ['ENST00000511766.2_1_6:119215493-119222091:+|nuORF', 'ENSG00000111875|ENST00000229595|ASF1A'] 60181 11358 LHYPSTTAL True PC9_epitope_Rep6 1001.51819600361 1001.51708993586 54.731 2 0.1927722001669551 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 29636 22167 FVLPILQKL True PC9_epitope_Rep5 1069.68995278633 1069.6888499358602 90.302 2 0.1927627171032151 0.0006801564359802754 0.9438714419765777 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 35928 9438 GVAPFTIAR True NCI_RA007_Epitope_Rep5 930.5287011176599 930.52760993586 42.942 2 0.19276270058915987 0.0006801564359802754 0.9438714419765777 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 132329 22850 VYLPPEAFTF True PC9_epitope_Rep5 1182.5961119711399 1182.5950099358602 92.888 2 0.19276020253741188 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 93937 20996 RVLELIPQI True PC9_epitope_Rep3 1079.6702799709099 1079.66918993586 86.037 2 0.19275694963261555 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000491987.1_1_22:35723272-35729230:+|nuORF', 'nc|ENSG00000100284|O60784-4|TOM1', 'nc|ENSG00000100284|O60784-2|TOM1', 'ENST00000404284.6_1_22:35717823-35727385:+|nuORF'] 138112 17140 YQHGIFQSI True PC9_epitope_Rep1 1091.53999407735 1091.5388899358602 70.752 2 0.19275500769043236 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1'] 137332 22370 YLIPLLERL True PC9_epitope_Rep5 1128.69068106232 1128.68958993586 91.057 2 0.1927535534010664 0.0006801564359802754 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 75348 13988 NQAKYIPEL True PC9_epitope_Rep4 1074.57095985246 1074.5698699358602 61.71 2 0.19275350474200317 0.0006801564359802754 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 138396 13245 YRDPNTIETL True PC9_epitope_Rep5 1220.60371653272 1220.60260993586 55.957 2 0.19275342220402525 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 113666 16373 TRDELEWKL True PC9_epitope_Rep3 1188.6138872935999 1188.61278993586 68.115 2 0.19274603942950524 0.0006801564359802754 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 107997 9990 [Acetylation]-TDAAVSFAK True H1975_Epitope_Rep1 950.47091177432 950.4703649679301 43.361 1 0.19274160498918597 0.0006801564359802754 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant'] 139681 6085 YTTDRVM[Oxidation]TV True PC9_epitope_Rep4 1100.5172104078802 1100.5161099358602 30.413 2 0.1927412822800017 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 114474 11631 TSETPDYLLKY True H1975_Epitope_Rep1 1328.6499980188 1328.64890993586 49.729 2 0.19273979072798758 0.0006801564359802754 0.9438714419765777 ['ENSG00000105656|ENST00000262809|ELL'] 55545 13991 LAYSGKLEEL True PC9_epitope_Rep6 1121.5968402471299 1121.59574993586 65.673 2 0.19273665160263515 0.0006801564359802754 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10', 'nc|ENSG00000101843|O75832-2|PSMD10', 'ENST00000338548.4_1_X:107331957-107334750:-|nuORF', 'ENST00000553388.1_1_X:107330914-107334750:-|nuORF'] 13407 8543 DNLAEDIM[Oxidation]R True NCI_RA007_Epitope_Rep2 1091.49172393603 1091.4906299358602 37.874 2 0.19273100128561566 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 97711 20359 SHEEALSFVSL True PC9_epitope_Rep5 1217.5928174958499 1217.59172993586 83.345 2 0.1927213445893308 0.0006801564359802754 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 40480 9756 HSEAFSINFR True NCI_RA007_Epitope_Rep2 1206.57817049122 1206.5770699358602 42.57 2 0.19271921834102604 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 40619 5538 HTEVPARNLY True H1975_Epitope_Rep3 1198.6094706195 1198.60836993586 26.35 2 0.19271748864284852 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 35044 7592 GRDENSVEL True PC9_epitope_Rep5 1017.4727023631699 1017.47160993586 34.153 2 0.19271683967474165 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 132873 9058 VYTSGVYHI True NCI_RA007_Epitope_Rep5 1037.51819600361 1037.5170899358602 41.498 2 0.1927164508163445 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 88485 10599 RAAEEFVNV True PC9_epitope_Rep6 1033.5192586327698 1033.5181699358602 51.588 2 0.19271124009741925 0.0006801564359802754 0.9438714419765777 ['ENSG00000132661|ENST00000254998|NXT1'] 44098 11758 ILMEHIHKL True PC9_epitope_Rep5 1132.64268532408 1132.64104490379 50.225 3 0.19270890783009417 0.0006801564359802754 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 84714 14184 QHFEFEYQT True PC9_epitope_Rep4 1227.5196525555898 1227.5185499358602 62.462 2 0.1927079123096752 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 31848 5949 GEPPKDYRIP True H1975_Epitope_Rep2 1170.6033226098998 1170.60166490379 27.865 3 0.1927074636192912 0.0006801564359802754 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 32503 8632 GGNFGFGDSR True PC9_epitope_Rep6 1012.4362572847999 1012.43516993586 43.021 2 0.19270519944124334 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 40741 16272 HTVGELIEV True PC9_epitope_Rep2 995.5287606873098 995.52766993586 67.832 2 0.19269706698638264 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 116290 20735 TVVNFLIRV True PC9_epitope_Rep2 1059.64406522307 1059.64296993586 85.196 2 0.19269687111650752 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 23831 17985 EYLLKVNEI True PC9_epitope_Rep4 1119.61757569171 1119.61646993586 77.233 2 0.1926909361127804 0.0006801564359802754 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 43263 11124 IHDGLTVHL True PC9_epitope_Rep4 1003.54507945779 1003.5439899358599 50.565 2 0.19268872365192405 0.0006801564359802754 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 70542 19220 LYTPVLIRF True PC9_epitope_Rep6 1120.66446631448 1120.6633699358601 86.582 2 0.19268839987997846 0.0006801564359802754 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 83746 11437 QEDFFQRVP True H1975_Epitope_Rep2 1164.55637241748 1164.55526993586 49.045 2 0.1926776546936283 0.0006801564359802754 0.9438714419765777 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF'] 106190 14984 SVPIDLQKV True PC9_epitope_Rep1 997.58079626017 997.57968993586 62.457 2 0.19267606323317205 0.0006801564359802754 0.9438714419765777 ['ENSG00000198056|ENST00000338193|PRIM1'] 38141 9040 HEQLSVAEI True H1975_Epitope_Rep1 1024.5189242795998 1024.5178299358602 39.679 2 0.19267332984377258 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'TUBA3D|p.A281V|2|0.56|ENSG00000075886|chr2:131480535-131480535|C/T|missense_variant', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant', 'ENST00000442868.1_1_1:202822165-202825009:-|nuORF'] 94501 13534 RYIANTVEL True PC9_epitope_Rep2 1077.58185888933 1077.5807699358602 57.352 2 0.19267313529198513 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 44964 20941 IQHDLIFSL True PC9_epitope_Rep5 1084.5916952970401 1084.5905899358602 85.607 2 0.1926612421439628 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 94781 16019 RYLPTGSFPFL True NCI_RA007_Epitope_Rep3 1296.6866583110398 1296.68556993586 70.69 2 0.19264827294436332 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 32222 19890 GFGFVTFDDHD True PC9_epitope_Rep4 1255.51456717515 1255.51346993586 84.639 2 0.19263672789383307 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 40349 5961 HRTDSEIAL True PC9_epitope_Rep4 1040.5250722892 1040.5239699358601 29.866 2 0.19263598350144417 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 26108 20716 FHFQDQQILTL True PC9_epitope_Rep2 1388.7088503075997 1388.7077499358602 85.12 2 0.19263554320103796 0.0006801564359802754 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 106681 17141 SYANVKQWL True PC9_epitope_Rep4 1107.57129420563 1107.57018993586 73.938 2 0.19263341136075673 0.0006801564359802754 0.9438714419765777 ['ENSG00000174903|ENST00000311481|RAB1B', 'nc|ENSG00000233111|Q92928|RAB1C'] 97910 5717 SHMEGVASV True PC9_epitope_Rep6 915.4120166829099 915.41090993586 30.138 2 0.1926309813040476 0.0006801564359802754 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 75150 8067 NNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep2 975.50591744819 975.50480993586 36.012 2 0.19262842213288228 0.0006801564359802754 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477', 'ENST00000290968.4_7:142478839-142482361:+|nuORF'] 31641 8380 GEHGLIIRV True NCI_RA007_Epitope_Rep1 992.57671393924 992.57560993586 36.598 2 0.19262512720930156 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 88792 8801 RDQIVTVSV True H1975_Epitope_Rep1 1015.56620882519 1015.56510993586 38.779 2 0.19261420429073858 0.0006801564359802754 0.9438714419765777 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 61130 7324 LLDEHHISY True H1975_Epitope_Rep1 1125.54547338061 1125.54382490379 33.181 3 0.19261198453473177 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 22214 8659 ETDIVVDHY True H1975_Epitope_Rep2 1089.49785448185 1089.4967499358602 38.266 2 0.1926097106536137 0.0006801564359802754 0.9438714419765777 ['CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 100135 22671 SLLDIIEKV True PC9_epitope_Rep5 1028.61176203528 1028.6106699358602 92.207 2 0.19260027683359382 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 22136 15026 ESYSIYVYK True PC9_epitope_Rep5 1150.55464108198 1150.55354993586 62.801 2 0.1925989326435683 0.0006801564359802754 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 24464 20478 FAIDEVLEKV True PC9_epitope_Rep4 1161.62814037541 1161.6270499358602 86.915 2 0.19259573702437793 0.0006801564359802754 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 10074 6904 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep2 1119.5171508382302 1119.51604993586 31.473 2 0.1925946724380683 0.0006801564359802754 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 89482 6982 REQLPPTTV True H1975_Epitope_Rep3 1039.5662088251897 1039.5651099358602 31.819 2 0.1925897720114072 0.0006801564359802754 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 140549 19984 YYLNDLERI True PC9_epitope_Rep5 1197.6029882567298 1197.60188993586 81.922 2 0.1925891594235017 0.0006801564359802754 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 47825 20173 IYSIDFTRF True PC9_epitope_Rep4 1160.5866099165999 1160.58550993586 85.732 2 0.19258847634013307 0.0006801564359802754 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B'] 129080 9699 VTARIALQY True H1975_Epitope_Rep3 1033.59202965021 1033.59092993586 42.328 2 0.1925793360980651 0.0006801564359802754 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH'] 85740 20317 QLVDIIEKV True PC9_epitope_Rep1 1055.62266107215 1055.6215699358602 82.978 2 0.19257824231749224 0.0006801564359802754 0.9438714419765777 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 24180 17400 EYTPRSWNF True PC9_epitope_Rep2 1198.54072235334 1198.5396299358601 72.188 2 0.19256869252315373 0.0006801564359802754 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 84568 18031 QHDFTSQIF True PC9_epitope_Rep1 1121.51417325233 1121.5130699358601 74.148 2 0.19256308566518338 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 21346 7799 ERLKEAYSV True PC9_epitope_Rep1 1093.57677350889 1093.57566993586 34.823 2 0.19255596480290113 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 88007 7541 QVSPEAGVQKV True PC9_epitope_Rep1 1140.6138872935999 1140.61278993586 33.824 2 0.19255533136841402 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 117012 15864 TYQDIQNTI True PC9_epitope_Rep2 1094.52440358286 1094.5233099358602 66.278 2 0.1925508954719559 0.0006801564359802754 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 25249 11817 FEDENFILK True H1975_Epitope_Rep3 1153.5655401188499 1153.56444993586 50.601 2 0.19255004512839574 0.0006801564359802754 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 104070 9353 SRTSIQSEL True PC9_epitope_Rep3 1019.52473793603 1019.52364993586 40.915 2 0.19253442582728983 0.0006801564359802754 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 31896 7338 GEQKFSSLP True H1975_Epitope_Rep2 991.4974605590298 991.49636993586 33.166 2 0.1925289903891412 0.0006801564359802754 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT'] 103525 12845 SRDDNM[Oxidation]FQI True PC9_epitope_Rep5 1140.48697290876 1140.4858699358601 54.417 2 0.1925285701027658 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 17360 6842 EHDTTEYKL True PC9_epitope_Rep3 1134.51931820242 1134.51766490379 31.334 3 0.19251627009817587 0.0006801564359802754 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 34459 14160 GQDEPLIHV True PC9_epitope_Rep1 1006.5083595958998 1006.50726993586 59.289 2 0.19251221618866973 0.0006801564359802754 0.9438714419765777 ['ENSG00000157778|ENST00000288607|PSMG3'] 70045 16977 LYGRNFNYL True PC9_epitope_Rep2 1158.5821932425 1158.58108993586 70.549 2 0.192509043986387 0.0006801564359802754 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 114413 9091 TSDTLNNVGY True H1975_Epitope_Rep1 1082.48801807414 1082.4869299358602 39.872 2 0.1925026234966125 0.0006801564359802754 0.9438714419765777 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 39869 12175 HQIEAVDGEEL True PC9_epitope_Rep2 1238.5778957076998 1238.57678993586 52.143 2 0.19249536518781166 0.0006801564359802754 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 43315 9732 IHEPEPHIL True PC9_epitope_Rep4 1083.57129420563 1083.57018993586 45.072 2 0.19249493445711383 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 127549 19269 VQVPVPVTV True PC9_epitope_Rep4 936.5644179200399 936.56386496793 82.221 1 0.19249090308959152 0.0006801564359802754 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 14943 23709 DYNFVFTSF True PC9_epitope_Rep2 1138.49712620586 1138.4960299358602 96.666 2 0.19248366766785377 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000123505|P17707-2|AMD1', 'ENSG00000123505|ENST00000368885|AMD1'] 102925 17369 SQIHDIVLV True PC9_epitope_Rep5 1022.5760452328999 1022.57494993586 71.81 2 0.19248032303000512 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 13942 14375 DRIKDEFQL True PC9_epitope_Rep2 1162.59823722946 1162.5971499358602 60.554 2 0.19247703314982254 0.0006801564359802754 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 42366 5026 IEMDSKRVP True H1975_Epitope_Rep3 1073.55392988933 1073.55282993586 24.453 2 0.19247445303632438 0.0006801564359802754 0.9438714419765777 ['ENSG00000154710|ENST00000284957|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-4|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-3|RABGEF1', 'ENST00000461017.1_1_7:66262359-66272860:+|nuORF'] 37579 17134 GYSEHFVEF True PC9_epitope_Rep4 1113.47672511445 1113.47562993586 73.912 2 0.19247299231421977 0.0006801564359802754 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 108654 5242 TELDKIRQA True NCI_RA007_Epitope_Rep3 1072.58767254576 1072.58656993586 27.623 2 0.19246541483963173 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 94924 8022 RYPDSHQLF True NCI_RA007_Epitope_Rep4 1161.55670677065 1161.55560993586 37.622 2 0.1924624389246733 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 138761 13628 YSDAFLNDSY True H1975_Epitope_Rep2 1193.48768372097 1193.4871749679298 57.558 1 0.19245896172283602 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 74114 12049 NHVTPPNVSL True PC9_epitope_Rep2 1076.56145779792 1076.56036993586 51.662 2 0.19244040061075532 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 47551 23223 IYLTFPVAM True PC9_epitope_Rep5 1053.55689001145 1053.55578993586 94.31 2 0.19243984668999875 0.0006801564359802754 0.9438714419765777 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 38149 5243 HEQSRIITV True H1975_Epitope_Rep2 1081.58800689893 1081.5869099358601 25.234 2 0.19243351441363774 0.0006801564359802754 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 11576 10444 DGTGVVEFVR True H1975_Epitope_Rep3 1077.5454733806098 1077.54436993586 45.232 2 0.19242309212798722 0.0006801564359802754 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 7203 14409 ARDFTVSAL True PC9_epitope_Rep2 978.5134449763399 978.51234993586 60.691 2 0.19242293183297318 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 135571 6553 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 30.173 2 0.19241401802166047 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 21585 4636 ERSGVNSEL True PC9_epitope_Rep4 989.47778774361 989.47668993586 24.351 2 0.19239830465538774 0.0006801564359802754 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 70909 10561 MELERIVSA True H1975_Epitope_Rep3 1046.5430308524599 1046.54192993586 45.689 2 0.19239564333930706 0.0006801564359802754 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 114463 4756 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 23.383 3 0.19239362686610673 0.0006801564359802754 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 76498 8122 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.58277496793 36.19 1 0.19239253129286824 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 138294 20735 YQYPVIIHL True PC9_epitope_Rep3 1144.6280808057597 1144.6269899358601 85.025 2 0.19238611773379208 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 132309 12486 VYLPNINKI True NCI_RA007_Epitope_Rep1 1072.62808080576 1072.6269899358601 52.545 2 0.1923792619727436 0.0006801564359802754 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 40502 7961 HSEYHTLLY True H1975_Epitope_Rep3 1161.54547338061 1161.54436993586 35.594 2 0.19237409860647556 0.0006801564359802754 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5'] 107773 19731 TAM[Oxidation]DVVYAL True PC9_epitope_Rep1 997.4790339940099 997.47792993586 80.723 2 0.19237320599503796 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 34819 17489 GQVDMDIKL True PC9_epitope_Rep3 1017.51648175145 1017.51538993586 72.448 2 0.19237274684399347 0.0006801564359802754 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 24326 7256 FADLSEAANR True NCI_RA007_Epitope_Rep4 1092.5199869087598 1092.5188899358602 34.547 2 0.19236930932939364 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 54202 17258 KYPENFFLL True NCI_RA007_Epitope_Rep2 1169.61209638845 1169.61098993586 71.866 2 0.19236487574164285 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 113413 15531 TQLPESTSLRL True PC9_epitope_Rep4 1243.67721582615 1243.67610993586 67.664 2 0.1923590158223698 0.0006801564359802754 0.9438714419765777 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000567743.5_1_16:66851261-66857485:-|nuORF'] 140393 18872 YYEYNHDLF True PC9_epitope_Rep3 1262.5244035828598 1262.5233099358602 77.813 2 0.19235295704407968 0.0006801564359802754 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 89062 8307 REELFIVSK True NCI_RA007_Epitope_Rep4 1119.62880908175 1119.6277099358601 38.765 2 0.19234913237555537 0.0006801564359802754 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 8608 3996 AVAIKAMAK True NCI_RA007_Epitope_Rep4 901.5419086536499 901.54080993586 21.624 2 0.19234857732440785 0.0006801564359802754 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'EIF5A|p.A145E|1|0.45|ENSG00000132507|chr17:7311609-7311609|C/A|missense_variant'] 139070 18900 YSLEKVFGI True PC9_epitope_Rep6 1054.5698972233 1054.5688099358601 85.345 2 0.19234525792291668 0.0006801564359802754 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 116798 21324 TYLPTSPLL True PC9_epitope_Rep2 1003.55899818643 1003.55790993586 87.487 2 0.19234242492174447 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 73503 8839 NFEDVAFDEKK True NCI_RA007_Epitope_Rep1 1340.6248459001197 1340.62321490379 38.381 3 0.192340187019617 0.0006801564359802754 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 105634 22090 SVFGFSFKL True PC9_epitope_Rep5 1030.5487678558998 1030.54766993586 90.0 2 0.1923370237094846 0.0006801564359802754 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000509410.1_1_5:33461160-33466106:+|nuORF'] 94956 10097 RYPTSIASL True NCI_RA007_Epitope_Rep4 1006.5447451046199 1006.54364993586 45.69 2 0.19233476293736787 0.0006801564359802754 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 138428 20440 YRDWFSSQL True PC9_epitope_Rep1 1200.55637241748 1200.55526993586 83.436 2 0.19233315152918656 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2', 'ENST00000522359.2_1_11:61630757-61632750:+|nuORF'] 128891 10204 VSTEVDARL True PC9_epitope_Rep1 988.5189242795998 988.51782993586 44.128 2 0.19232271831163178 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 59071 14852 LGDLYEEEMR True PC9_epitope_Rep5 1253.5598031154097 1253.5587099358602 62.129 2 0.19232057177300094 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 140519 21490 YYITGNLETF True PC9_epitope_Rep5 1219.57610480255 1219.5750099358602 87.695 2 0.19231888774158687 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 53271 14743 KTIEDDLVSA True PC9_epitope_Rep1 1089.55536935797 1089.55426993586 61.528 2 0.19231635190383836 0.0006801564359802754 0.9438714419765777 ['ENST00000544662.1_1_12:132414461-132416977:+|nuORF', 'nc|ENSG00000177192|Q9Y606-2|PUS1', 'ENSG00000177192|ENST00000376649|PUS1'] 83079 20967 PYMDSPQSIGF True PC9_epitope_Rep3 1240.5434247752798 1240.5423299358602 85.929 2 0.19231545848061107 0.0006801564359802754 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 95620 8403 SATTSPFFK True NCI_RA007_Epitope_Rep4 984.4916469025999 984.49054993586 39.138 2 0.19231383402504587 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB'] 72435 19781 MTISEFDRL True PC9_epitope_Rep5 1110.53794547202 1110.5368499358601 81.133 2 0.19231252986389186 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-4|ABLIM3'] 23873 17934 EYMEHVYLI True PC9_epitope_Rep6 1195.5583465634297 1195.55724993586 81.61 2 0.19231017008768223 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 102571 17407 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51234993586 72.215 2 0.19230423237714592 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 102733 21111 SQDYPTLAF True PC9_epitope_Rep3 1040.48147614172 1040.4803699358602 86.485 2 0.19230171163450982 0.0006801564359802754 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 72368 9210 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46340993586 40.419 2 0.19230094751275464 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 72126 17927 MRENQITISL True PC9_epitope_Rep3 1203.6281574587497 1203.6270699358602 74.161 2 0.1922994872498623 0.0006801564359802754 0.9438714419765777 ['ENST00000264779.6_1_5:56531811-56531844:+|nuORF'] 93938 20983 RVLELIPQI True PC9_epitope_Rep5 1079.6702799709099 1079.66918993586 85.772 2 0.19229596037730354 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000491987.1_1_22:35723272-35729230:+|nuORF', 'nc|ENSG00000100284|O60784-4|TOM1', 'nc|ENSG00000100284|O60784-2|TOM1', 'ENST00000404284.6_1_22:35717823-35727385:+|nuORF'] 131000 18458 VVLGEFGVRNV True PC9_epitope_Rep2 1187.6662572196299 1187.6651699358601 76.332 2 0.19227883104770066 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 12034 11103 DIDISSPEFK True H1975_Epitope_Rep1 1149.55536935797 1149.55426993586 47.672 2 0.19227480428405194 0.0006801564359802754 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 77258 17180 NYIPRFWTF True NCI_RA007_Epitope_Rep5 1242.6185787512197 1242.61748993586 72.856 2 0.19227056451028154 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 54248 21903 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 89.29 2 0.1922539362121137 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 25295 5721 FEEEM[Oxidation]KGIAA True H1975_Epitope_Rep2 1139.5168760547099 1139.5157699358601 27.004 2 0.1922516255087118 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104763|Q13510-3|ASAH1', 'ENST00000523744.2_2_8:17924585-17924894:-|nuORF', 'ENSG00000104763|ENST00000637790|ASAH1', 'nc|ENSG00000104763|Q13510-2|ASAH1'] 134521 15730 WVDSDQLLY True H1975_Epitope_Rep2 1137.53423999057 1137.53367496793 65.678 1 0.19225133648500958 0.0006801564359802754 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 105802 15463 SVINEINKI True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 64.756 2 0.1922495309920609 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 100148 21432 SLLDPVPEV True PC9_epitope_Rep5 967.52261267771 967.52150993586 87.502 2 0.19224659085994736 0.0006801564359802754 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 107181 20953 SYNPLWLRI True PC9_epitope_Rep2 1160.6342288153598 1160.63312993586 86.044 2 0.19223808768705403 0.0006801564359802754 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 38246 14065 HEYPWILSA True H1975_Epitope_Rep3 1114.54474510462 1114.54364993586 59.424 2 0.19223624422111132 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 40133 11237 HRDSGILGL True PC9_epitope_Rep4 966.5246783663799 966.52358993586 50.998 2 0.19223510348236975 0.0006801564359802754 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 75702 16536 NQVEALNNL True PC9_epitope_Rep5 1013.5141732523299 1013.51306993586 68.607 2 0.19223453469011154 0.0006801564359802754 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'BIRC6|p.C777*|1|0.3|ENSG00000115760|chr2:32415620-32415621|TG/-|frameshift_variant'] 21379 6826 ERMAGNEAL True PC9_epitope_Rep5 989.4600295044899 989.4589299358599 31.228 2 0.19223019966081592 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 113091 19455 TPYNYPVPV True PC9_epitope_Rep5 1048.5229470308798 1048.52184993586 79.885 2 0.1922264075506579 0.0006801564359802754 0.9438714419765777 ['ENSG00000170906|ENST00000485876|NDUFA3'] 4413 13361 AIVDKVPSV True PC9_epitope_Rep3 926.54368247546 926.54258993586 56.426 2 0.19222545668586144 0.0006801564359802754 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 131892 12118 VYEDQVGKF True PC9_epitope_Rep5 1083.5236753068698 1083.52256993586 51.603 2 0.19221647573938666 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 14032 15228 DSDAPLFY True H1975_Epitope_Rep2 926.4021631918599 926.4016149679301 63.732 1 0.19220887739854559 0.0006801564359802754 0.9438714419765777 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 86975 15255 QRVPLSVQL True PC9_epitope_Rep4 1038.61857875122 1038.61748993586 66.608 2 0.19220641070698777 0.0006801564359802754 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 1480 6237 AEEMETGNVA True H1975_Epitope_Rep3 1049.4335399731299 1049.4324499358602 29.002 2 0.19220428056655264 0.0006801564359802754 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 46228 8765 ITDSAGHILY True H1975_Epitope_Rep1 1088.55022440788 1088.54912993586 38.645 2 0.19220195889217126 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 123107 18546 VHAYIISSL True PC9_epitope_Rep1 1001.55458151233 1001.55348993586 76.127 2 0.19219486973446298 0.0006801564359802754 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 123823 15578 VIVEPLEQL True NCI_RA007_Epitope_Rep5 1038.5961119711399 1038.5950099358602 66.629 2 0.19219481774755656 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 27720 21024 FQDPVPLTV True PC9_epitope_Rep5 1014.5385970950199 1014.53750993586 85.926 2 0.19217985631442794 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 43402 8964 IHSEPLGV True PC9_epitope_Rep2 850.45486747106 850.45376993586 39.836 2 0.19217934862095115 0.0006801564359802754 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 138065 5198 YQDTHPERL True PC9_epitope_Rep3 1157.5465360097699 1157.54488490379 25.076 3 0.19217697026627728 0.0006801564359802754 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 115094 20264 TTVDHFWGL True PC9_epitope_Rep2 1074.51344497634 1074.5123499358601 83.366 2 0.19216822504372888 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.P444Afs*17|1|0.44|ENSG00000164828|chr7:853570-853571|-/G|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 92098 10073 RPWSGPSSV True PC9_epitope_Rep5 971.4824792012299 971.48138993586 43.727 2 0.19216046172815116 0.0006801564359802754 0.9438714419765777 ['ENST00000479540.5_1_20:62204085-62204322:-|nuORF'] 23996 14122 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 59.592 2 0.1921585182670553 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 106880 19275 SYIEHIFEI True PC9_epitope_Rep6 1149.57062549929 1149.5695299358601 86.788 2 0.19213994475665822 0.0006801564359802754 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 52799 14411 KQTALVELLK True PC9_epitope_Rep5 1141.7070594024499 1141.7059699358601 60.431 2 0.19213034164210877 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 75366 13449 NQDDSILKV True PC9_epitope_Rep3 1030.5294889632999 1030.52838993586 56.777 2 0.19212925870784836 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 23968 12254 EYPDRIMNTF True NCI_RA007_Epitope_Rep5 1284.5808729131597 1284.5797699358602 53.786 2 0.1921212490792659 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 77132 16664 NYATRIVTL True PC9_epitope_Rep3 1049.58694426977 1049.58584993586 69.234 2 0.1921146923759014 0.0006801564359802754 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 22155 11277 ESYSVYVYK True PC9_epitope_Rep6 1136.5389910178399 1136.5378899358602 54.39 2 0.1921128419253842 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 22133 15118 ESYSIYVYK True PC9_epitope_Rep1 1150.55464108198 1150.55354993586 62.969 2 0.1921077654336116 0.0006801564359802754 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 14342 4347 DTDSEEEIR True PC9_epitope_Rep4 1092.45711186868 1092.45600993586 23.161 2 0.19210628930007526 0.0006801564359802754 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 70515 18520 LYTEKFEEF True PC9_epitope_Rep3 1204.5652057656796 1204.5641099358602 76.455 2 0.1921047767464283 0.0006801564359802754 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 2897 7386 AEYVVQQEGA True H1975_Epitope_Rep3 1092.50875351872 1092.50817496793 33.388 1 0.19210456778771998 0.0006801564359802754 0.9438714419765777 ['ENSG00000197601|ENST00000354817|FAR1', 'ENST00000524933.1_1_11:13716477-13732426:+|nuORF'] 52498 12537 KPNPNQIISV True PC9_epitope_Rep1 1108.62405805448 1108.62296993586 53.094 2 0.19209679121112236 0.0006801564359802754 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 136027 21965 YFQNTQGLIF True PC9_epitope_Rep1 1229.6080736371698 1229.6069699358602 89.307 2 0.19209507387605562 0.0006801564359802754 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 26243 21562 FHYIFNVQL True PC9_epitope_Rep5 1179.6076797143498 1179.60658993586 87.977 2 0.19209071013113396 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3', 'ENST00000488104.1_1_10:111879082-111879346:+|nuORF'] 23942 12034 EYNSDLHQF True PC9_epitope_Rep1 1151.4883524273098 1151.48724993586 51.149 2 0.1920883481386049 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 54170 10199 KYPDAVATW True NCI_RA007_Epitope_Rep4 1049.51819600361 1049.5170899358602 46.085 2 0.19208643356742552 0.0006801564359802754 0.9438714419765777 ['CON__P31096', 'ENST00000505146.1_1_4:88898047-88901296:+|nuORF', 'ENST00000508002.5_1_4:88896921-88901631:+|nuORF', 'nc|ENSG00000118785|P10451-4|SPP1', 'nc|ENSG00000118785|P10451-5|SPP1', 'ENSG00000118785|ENST00000395080|SPP1', 'ENST00000509659.5_1_4:88898870-88904045:+|nuORF'] 75124 19888 NMVDIIHSV True PC9_epitope_Rep5 1026.51681610462 1026.51570993586 81.551 2 0.19208636618145405 0.0006801564359802754 0.9438714419765777 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 21031 12189 ERDAYVQAL True PC9_epitope_Rep1 1063.52982331647 1063.5287299358602 51.743 2 0.19208059420234955 0.0006801564359802754 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 109581 9213 THDDSHLVSL True PC9_epitope_Rep2 1122.5305515924601 1122.5294499358602 40.777 2 0.19207978945360757 0.0006801564359802754 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 104290 14683 SSEELPLYY True H1975_Epitope_Rep2 1099.5073565363898 1099.50677496793 61.64 1 0.1920791890418555 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 41573 5002 IDEM[Oxidation]PEAAVK True H1975_Epitope_Rep3 1117.5325261188498 1117.5314299358602 24.369 2 0.19207860116274195 0.0006801564359802754 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'chr1:156745373-156749864|136|12.4|0.54|4.51|-|0|HDGF,None|3', 'chr1:156745373-156750390|167|12.17|0.49|4.62|-|0|HDGF,None|2', 'chr1:156745373-156751791|144|11.51|0.39|4.87|-|0|HDGF,None|1', 'ENST00000495212.1_1_1:156715087-156721275:-|nuORF'] 24009 12717 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep6 1300.57578791316 1300.57468993586 60.396 2 0.19207829137620072 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 28088 21597 FRDYFPIQL True PC9_epitope_Rep3 1197.6182443980497 1197.6171499358602 88.368 2 0.19207780114182768 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 14933 12492 DYMKTTSNF True PC9_epitope_Rep1 1105.47501086229 1105.47390993586 52.918 2 0.1920709817487256 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 14663 22320 DVNFEFPEFQL True NCI_RA007_Epitope_Rep1 1383.63468230783 1383.63358993586 91.439 2 0.19206867014574755 0.0006801564359802754 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 133237 12469 WEEEFIERC True H1975_Epitope_Rep2 1239.5230236838697 1239.52192993586 53.051 2 0.19206690201339682 0.0006801564359802754 0.9438714419765777 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 93633 9559 RTEEALQLY True H1975_Epitope_Rep3 1121.5716881284498 1121.5705899358602 41.778 2 0.19206153826704647 0.0006801564359802754 0.9438714419765777 ['ENSG00000174780|ENST00000642900|SRP72'] 39141 6473 HLDTLTEHY True H1975_Epitope_Rep3 1127.52473793603 1127.52364993586 29.87 2 0.19205681689176574 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 28664 13280 FSSPHLVQV True PC9_epitope_Rep6 1012.5341804209198 1012.53308993586 62.735 2 0.19205675388166696 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 136596 20038 YHYIFVTGV True PC9_epitope_Rep5 1097.5545815123298 1097.5534899358602 82.128 2 0.1920535476311664 0.0006801564359802754 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3', 'ENST00000515070.1_1_17:48741105-48741487:+|nuORF', 'ENST00000571855.1_1_17:48740997-48741507:+|nuORF'] 138401 13055 YRDPTTVTTL True PC9_epitope_Rep1 1165.59790287629 1165.5968099358602 55.084 2 0.1920432357229999 0.0006801564359802754 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 95033 11275 RYQTQPVTL True PC9_epitope_Rep3 1104.5927579261997 1104.5916699358602 48.378 2 0.19204029360631175 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 132941 23041 VYTVVDEMFL True PC9_epitope_Rep2 1214.5893123385397 1214.58820993586 94.12 2 0.19201650476125706 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 43308 10402 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 45.334 2 0.19201480286379424 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 89350 8936 REMEENFAV True NCI_RA007_Epitope_Rep5 1123.49680893603 1123.49570993586 41.033 2 0.1920141636817773 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 11493 14667 DGFIDLM[Oxidation]ELK True H1975_Epitope_Rep1 1195.5794763112701 1195.57836993586 61.631 2 0.19201148893925327 0.0006801564359802754 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2', 'nc|ENSG00000115468|Q9BUP0-2|EFHD1', 'GIGYF2-EFHD1|2|fusion', 'ENSG00000115468|ENST00000264059|EFHD1'] 7184 16519 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.5233099358602 68.781 2 0.19200519120649634 0.0006801564359802754 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 38224 5629 HEVKDNYIP True H1975_Epitope_Rep3 1113.5454733806098 1113.54436993586 26.689 2 0.19200119875749602 0.0006801564359802754 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 23879 6203 EYMKHTRLF True NCI_RA007_Epitope_Rep3 1223.6121134717898 1223.61046490379 31.406 3 0.19199419344044433 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 9761 18514 AYLEAIHNF True PC9_epitope_Rep3 1076.52909504048 1076.5279899358602 76.433 2 0.19199267133599468 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 3232 4843 AGFAGDDAPR True NCI_RA007_Epitope_Rep4 975.4410083120698 975.43990993586 25.067 2 0.19199102350437788 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 17638 12420 EHQAVLQSL True PC9_epitope_Rep3 1023.53490869691 1023.53380993586 52.802 2 0.19198685882905667 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'nc|ENSG00000137171|Q9NSK0-2|KLC4'] 43615 18026 IIIPEIQKV True PC9_epitope_Rep4 1051.66413196131 1051.66302993586 77.402 2 0.19197854715083343 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 74713 20643 NLLAHFINA True PC9_epitope_Rep1 1011.55016483823 1011.54906993586 84.224 2 0.1919698805496503 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 95256 6177 SADPDNLKY True H1975_Epitope_Rep2 1021.4716397340101 1021.47054993586 28.73 2 0.191956402149996 0.0006801564359802754 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1'] 6790 12184 AQFEHTILL True NCI_RA007_Epitope_Rep5 1070.5760452329 1070.57494993586 53.519 2 0.1919529193196269 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 5075 20838 ALLPHLYTL True PC9_epitope_Rep3 1039.60661708519 1039.6055299358602 85.425 2 0.19194871939019975 0.0006801564359802754 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 125596 19402 VMAPRALLL True PC9_epitope_Rep5 982.5997578829398 982.59866993586 79.676 2 0.19193942234775013 0.0006801564359802754 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 54203 15884 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 70.137 2 0.19193040427527547 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 109680 7271 THEEAVTAL True PC9_epitope_Rep4 969.4767251144499 969.47562993586 35.282 2 0.19192422022040354 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 86681 16198 QRIDEFEAL True PC9_epitope_Rep4 1119.5560380643099 1119.5549499358601 70.249 2 0.19192383212906283 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 101351 9478 SMDEKVELY True H1975_Epitope_Rep2 1112.5059766374 1112.5048699358601 41.425 2 0.19190698357804278 0.0006801564359802754 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1'] 117215 17542 TYTSYLDKF True PC9_epitope_Rep4 1136.5389910178399 1136.5378899358602 75.489 2 0.1918935296452243 0.0006801564359802754 0.9438714419765777 ['ENSG00000069956|ENST00000261845|MAPK6'] 101354 6736 SM[Oxidation]DNNRSLDL True NCI_RA007_Epitope_Rep4 1179.51900131303 1179.5179099358602 32.532 2 0.19189287032579666 0.0006801564359802754 0.9438714419765777 ['CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'CON__P50446', 'CON__Q922U2'] 87661 5917 QVASTLKQV True PC9_epitope_Rep4 972.5603951687598 972.55928993586 29.668 2 0.19189250037235053 0.0006801564359802754 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 2806 6004 AEVEPTPEA True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 28.073 1 0.1918835312146368 0.0006801564359802754 0.9438714419765777 ['ENSG00000186834|ENST00000332499|HEXIM1'] 35725 10348 GTSSLFIYK True NCI_RA007_Epitope_Rep4 1014.53859709502 1014.53750993586 46.659 2 0.19188050665967768 0.0006801564359802754 0.9438714419765777 ['ENSG00000179941|ENST00000650064|BBS10'] 24346 8484 FADQEVRSL True H1975_Epitope_Rep2 1063.52982331647 1063.5287299358602 37.586 2 0.1918749755301863 0.0006801564359802754 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 7143 17072 AQYKFVYQV True PC9_epitope_Rep5 1144.59169529704 1144.5905899358602 70.686 2 0.19187442381999217 0.0006801564359802754 0.9438714419765777 ['ENSG00000152104|ENST00000366956|PTPN14'] 54055 20700 KYLTAEAFGF True PC9_epitope_Rep3 1145.5757108797297 1145.57460993586 84.896 2 0.19187395113794306 0.0006801564359802754 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 97852 5639 SHITPSTQQHL True PC9_epitope_Rep3 1247.62584895963 1247.62420490379 26.767 3 0.19186817244044582 0.0006801564359802754 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 95532 7409 SAQSFFENK True NCI_RA007_Epitope_Rep3 1056.48762415132 1056.48652993586 36.268 2 0.1918671951872658 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 106918 9871 SYISRTNQL True PC9_epitope_Rep1 1080.5563724174801 1080.55526993586 42.828 2 0.1918658272687185 0.0006801564359802754 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 71291 14624 MHAETAFESL True PC9_epitope_Rep4 1134.5015599633 1134.50046993586 64.181 2 0.19186408852112274 0.0006801564359802754 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 104771 7233 STDPEALHY True H1975_Epitope_Rep2 1031.45598966987 1031.4548899358601 32.758 2 0.19186343421259625 0.0006801564359802754 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 9648 15081 AYGKDFHLI True PC9_epitope_Rep1 1062.5498304850598 1062.5487299358601 62.827 2 0.19186039116970807 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 29876 12649 FVYDEPGHAV True PC9_epitope_Rep5 1132.5189242795998 1132.5178299358602 53.657 2 0.19185234889036648 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 47582 12152 IYNGDMEKI True PC9_epitope_Rep3 1081.51139637101 1081.51028993586 51.782 2 0.19185180849019445 0.0006801564359802754 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 38372 17450 HGFAGYFETV True PC9_epitope_Rep6 1126.5083595959 1126.5072699358602 79.74 2 0.19184871291614963 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5', 'ENST00000557758.1_1_14:23391634-23392032:-|nuORF'] 64823 20024 LSAFPFLQEY True H1975_Epitope_Rep2 1213.60192562757 1213.60082993586 83.0 2 0.19184479054406153 0.0006801564359802754 0.9438714419765777 ['ENSG00000170899|ENST00000370963|GSTA4', 'nc|ENSG00000170899|O15217-2|GSTA4'] 124259 20367 VLDDKLVFV True PC9_epitope_Rep3 1046.60119735158 1046.60010993586 83.59 2 0.19184339080351995 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 92296 10602 RQLGLPTAL True NCI_RA007_Epitope_Rep3 967.5814649665099 967.58036993586 48.753 2 0.19183539564052113 0.0006801564359802754 0.9438714419765777 ['ENSG00000053372|ENST00000330263|MRTO4'] 104255 5436 SSDRTITEY True H1975_Epitope_Rep2 1070.48801807414 1070.4869299358602 25.935 2 0.19183241353858654 0.0006801564359802754 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 86846 14650 QRQDIAFAY True PC9_epitope_Rep5 1110.5458077337798 1110.54470993586 61.354 2 0.19182338955260694 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 2115 8340 AELQRLVAA True H1975_Epitope_Rep2 969.5607295219298 969.55962993586 37.032 2 0.19181708743477413 0.0006801564359802754 0.9438714419765777 ['ENSG00000150779|ENST00000504148|TIMM8B'] 9068 15227 AVIVWSFMK True NCI_RA007_Epitope_Rep4 1079.58377346563 1079.5826699358602 66.198 2 0.19181383106872507 0.0006801564359802754 0.9438714419765777 ['ENST00000514133.1_1_4:52895917-52895998:-|nuORF'] 27009 21459 FLLGPRLVLA True PC9_epitope_Rep5 1097.6961007959299 1097.69500993586 87.584 2 0.19181316672738172 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 92114 10697 RPYQPLPEA True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 46.093 2 0.19181272915982814 0.0006801564359802754 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 94989 9795 RYQDIIHSI True NCI_RA007_Epitope_Rep4 1143.6036569630699 1143.60254993586 44.526 2 0.19180882693036286 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 139354 8727 YTDSYTDTY True H1975_Epitope_Rep3 1127.42950013851 1127.42897496793 38.571 1 0.19180703649249545 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 6991 19565 AQQELKLLL True PC9_epitope_Rep5 1054.6386454894598 1054.63754993586 80.306 2 0.19180354067904157 0.0006801564359802754 0.9438714419765777 ['ENSG00000119041|ENST00000263956|GTF3C3'] 91594 7648 RPASYQSVSV True PC9_epitope_Rep2 1092.55637241748 1092.55526993586 34.788 2 0.19179831031221656 0.0006801564359802754 0.9438714419765777 ['ENSG00000167720|ENST00000344595|SRR'] 24729 11241 FAYDGKDYL True NCI_RA007_Epitope_Rep3 1090.4971262058598 1090.4960299358602 51.325 2 0.19179368258441074 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 102901 17783 SQIEADFRL True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 73.692 2 0.19178791283239072 0.0006801564359802754 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 110464 13142 TIPEAFRGV True PC9_epitope_Rep6 988.5341804209198 988.53308993586 62.191 2 0.19178277895871074 0.0006801564359802754 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 61699 20200 LLIDELNKL True PC9_epitope_Rep4 1069.63831113629 1069.63720993586 85.837 2 0.19178245961822266 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 89936 19696 RFVNVVPTF True PC9_epitope_Rep2 1077.5971150306498 1077.5960099358601 81.148 2 0.19177612268876842 0.0006801564359802754 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 47546 23289 IYLTFPVAM True PC9_epitope_Rep1 1053.55689001145 1053.55578993586 94.369 2 0.1917564707567156 0.0006801564359802754 0.9438714419765777 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 15166 8182 EAESSPFVER True PC9_epitope_Rep2 1149.5302172392899 1149.52912993586 36.829 2 0.19175264080875806 0.0006801564359802754 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 89740 5936 REYQLNDSAA True NCI_RA007_Epitope_Rep2 1165.53636524889 1165.53526993586 27.699 2 0.19175150650999648 0.0006801564359802754 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 4167 6239 AIAQAESLRYK True NCI_RA007_Epitope_Rep1 1248.6826355597598 1248.68098490379 28.302 3 0.1917506225451528 0.0006801564359802754 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 38088 6962 HENKFYINP True H1975_Epitope_Rep2 1160.5614577979197 1160.56036993586 31.699 2 0.19174840810908855 0.0006801564359802754 0.9438714419765777 ['ENST00000548259.1_1_12:110930799-110939856:-|nuORF', 'ENSG00000111237|ENST00000549578|VPS29', 'nc|ENSG00000111237|Q9UBQ0-2|VPS29'] 53277 18454 KTIEDTLMTV True PC9_epitope_Rep4 1149.59512599497 1149.5940299358601 79.053 2 0.1917430332557708 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 2377 11189 AEQFSSLTP True H1975_Epitope_Rep2 978.4658260775799 978.4652749679301 48.077 1 0.1917423483716466 0.0006801564359802754 0.9438714419765777 ['ENST00000366535.3_1_1:244615028-244615205:-|nuORF'] 135610 9057 YEEMGIKPP True H1975_Epitope_Rep2 1062.5055827145798 1062.5044899358602 39.791 2 0.1917388427840482 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 39784 18508 HQDNNFLYL True PC9_epitope_Rep4 1162.54072235334 1162.5396299358601 79.263 2 0.19173780511668104 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 138426 20185 YRDQQLLLL True PC9_epitope_Rep3 1160.6553581827598 1160.6542699358602 82.899 2 0.19173711596131535 0.0006801564359802754 0.9438714419765777 ['ENSG00000123684|ENST00000366997|LPGAT1'] 468 10285 AAM[Oxidation]LDTVVFK True NCI_RA007_Epitope_Rep5 1109.57908238845 1109.5779899358602 46.191 2 0.19173683483894075 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 86612 11476 QRDPNSPLYSV True PC9_epitope_Rep4 1274.62551460646 1274.62440993586 51.904 2 0.19173019314102277 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF'] 76355 9536 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.4600299358601 41.652 2 0.19172553617955232 0.0006801564359802754 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 77136 15426 NYAWVYYHL True NCI_RA007_Epitope_Rep2 1227.57129420563 1227.57018993586 64.705 2 0.19172478120730926 0.0006801564359802754 0.9438714419765777 ['ENSG00000119917|ENST00000371818|IFIT3'] 96363 9222 SEGFAVIKEA True H1975_Epitope_Rep2 1049.53932537101 1049.53822993586 40.426 2 0.19171765401486854 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 7498 7115 ASEFPGAQHY True H1975_Epitope_Rep2 1105.48287312405 1105.48176993586 32.3 2 0.19170993143333767 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 32142 20983 GFAFVTFDDHD True PC9_epitope_Rep1 1269.5302172392899 1269.52912993586 85.537 2 0.1917011522492804 0.0006801564359802754 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 88296 21558 QYILFPLRF True PC9_epitope_Rep4 1195.67536535135 1195.6742699358601 91.103 2 0.19169441988974306 0.0006801564359802754 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 131796 10023 VYANGIRNI True PC9_epitope_Rep2 1018.5559784946599 1018.55488993586 43.879 2 0.19169286160872992 0.0006801564359802754 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 133054 14966 VYVVGTAHF True PC9_epitope_Rep2 991.5127167003499 991.51160993586 62.824 2 0.19169201254685417 0.0006801564359802754 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 107452 20960 SYVRSLPFF True PC9_epitope_Rep5 1114.5811306133398 1114.58002993586 85.682 2 0.19167966292929284 0.0006801564359802754 0.9438714419765777 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 132809 20004 VYSRTFTWL True PC9_epitope_Rep2 1171.6025943339098 1171.6014899358602 82.349 2 0.19167678176048983 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 47434 14118 IYIKQIKTF True PC9_epitope_Rep3 1152.6906810623198 1152.68958993586 59.39 2 0.1916710040191726 0.0006801564359802754 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 113511 10226 TQTAVITRI True PC9_epitope_Rep2 1001.5869442697699 1001.58584993586 44.67 2 0.19166612853261328 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 107137 15088 SYM[Oxidation]LVNENRF True PC9_epitope_Rep1 1287.59177233047 1287.5906699358602 62.854 2 0.1916636065486401 0.0006801564359802754 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 140611 13205 YYMKDLPTSF True NCI_RA007_Epitope_Rep5 1263.58456131127 1263.5834699358602 57.474 2 0.19165587475892407 0.0006801564359802754 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 52178 8783 KMDDLNLHY True H1975_Epitope_Rep3 1147.53319444475 1147.53208993586 38.789 2 0.1916541434474903 0.0006801564359802754 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF', 'SPRYD3|p.N13K|1|0.38|ENSG00000167778|chr12:53077246-53077246|G/T|missense_variant'] 40371 4295 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 22.932 3 0.19165191240295604 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 71152 5602 MEVEAPSKPA True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 26.55 2 0.19165083724069978 0.0006801564359802754 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 22315 5991 ETEEGAHDLY True H1975_Epitope_Rep2 1162.4778473132599 1162.4767499358602 28.023 2 0.19164784192439144 0.0006801564359802754 0.9438714419765777 ['ENST00000431534.5_1_22:41925289-41928713:-|nuORF', 'nc|ENSG00000100413|Q9Y535-2|POLR3H', 'ENSG00000100413|ENST00000355209|POLR3H'] 14249 4575 DSYVGDEAQSK True NCI_RA007_Epitope_Rep2 1197.51496109797 1197.5138699358602 22.422 2 0.19163512524341214 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 97130 6965 SFETTDESLR True NCI_RA007_Epitope_Rep4 1183.5356965425499 1183.5345899358601 33.416 2 0.19163180921224904 0.0006801564359802754 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000484852.1_1_3:147884522-147885023:-|nuORF', 'ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 94433 16406 RYFKGPELL True PC9_epitope_Rep5 1121.6233297784897 1121.62222993586 68.104 2 0.19163028112981906 0.0006801564359802754 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'CSNK2A1|p.D205H|1|0.1|ENSG00000101266|chr20:492262-492262|C/G|missense_variant', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 131361 11954 VVSEGVPRI True PC9_epitope_Rep5 954.5498304850599 954.54872993586 50.978 2 0.19161755953103538 0.0006801564359802754 0.9438714419765777 ['ENSG00000186222|ENST00000320776|BLOC1S4'] 138852 5126 YSDM[Oxidation]REANY True H1975_Epitope_Rep2 1163.45533842731 1163.4542499358602 24.793 2 0.1916172711514088 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 135464 8106 YEAQDPEIA True H1975_Epitope_Rep2 1034.4556553166997 1034.45507496793 36.128 1 0.19161680601180922 0.0006801564359802754 0.9438714419765777 ['ENSG00000111678|ENST00000229281|C12orf57'] 40341 8018 HRTDSEIAL True PC9_epitope_Rep1 1040.5250722892 1040.5239699358601 35.662 2 0.19161517406928077 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 140274 13255 YYAEVETRI True PC9_epitope_Rep2 1142.5607890915799 1142.5596899358602 56.26 2 0.19161474406324028 0.0006801564359802754 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 86276 9124 QQDPQQYNV True PC9_epitope_Rep2 1118.49925146418 1118.49814993586 40.434 2 0.19161003479356908 0.0006801564359802754 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 54412 8456 KYSLIKGNF True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 39.342 2 0.19160118299203954 0.0006801564359802754 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 116687 17788 TYISWKEEL True PC9_epitope_Rep4 1167.58119018299 1167.58008993586 76.45 2 0.1915998970754916 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 135575 7010 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 31.928 2 0.19159471516444954 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 116813 20691 TYLSIIHSL True PC9_epitope_Rep5 1045.58079626017 1045.5796899358602 84.643 2 0.19159119008939657 0.0006801564359802754 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 62475 12008 LLSNDEVTIK True PC9_epitope_Rep5 1130.6183039677 1130.61720993586 51.183 2 0.1915878182652337 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 6707 4935 AQDEERQASL True PC9_epitope_Rep3 1145.53127986845 1145.53018993586 24.075 2 0.19158567688160838 0.0006801564359802754 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT'] 22975 17102 EVIKELAQI True PC9_epitope_Rep2 1041.6070110080097 1041.6059099358602 71.032 2 0.1915851204217144 0.0006801564359802754 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 67511 16014 LTELPDWSY True H1975_Epitope_Rep3 1122.5233409537 1122.5222499358601 67.055 2 0.19158249670585134 0.0006801564359802754 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 135283 16031 YAYTGVLQL True H1975_Epitope_Rep2 1026.53859709502 1026.53807496793 66.861 1 0.19158245877288468 0.0006801564359802754 0.9438714419765777 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4', 'KLHL4|p.Q238H|1|0.86|ENSG00000102271|chrX:87614557-87614557|G/T|missense_variant'] 1409 10077 AEEFVIVKA True H1975_Epitope_Rep3 1004.5542471591598 1004.55314993586 43.8 2 0.19158119683324162 0.0006801564359802754 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.L636V|1|0.18|ENSG00000196455|chr3:130723489-130723489|G/C|missense_variant'] 140867 17509 YYTPITPHL True PC9_epitope_Rep2 1103.56514619603 1103.56404993586 72.606 2 0.19157973252453522 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 77112 19296 NYAQVLDKF True PC9_epitope_Rep3 1096.5553097883198 1096.5542099358602 79.443 2 0.191578738061205 0.0006801564359802754 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 138899 13214 YSDVMLENY True H1975_Epitope_Rep2 1132.47467650912 1132.47417496793 55.955 1 0.19157792455220593 0.0006801564359802754 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426', 'ZNF426|p.N172Tfs*37|1|0.12|ENSG00000130818|chr19:9529532-9529532|C/-|frameshift_variant', 'ENSG00000198028|ENST00000301480|ZNF560'] 33788 13542 GLSTEGIYRV True PC9_epitope_Rep4 1093.57677350889 1093.57566993586 59.985 2 0.1915743618431507 0.0006801564359802754 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 115029 6428 TTM[Oxidation]YPGIADR True H1975_Epitope_Rep3 1139.5281094447498 1139.5270099358602 29.701 2 0.19156256658905352 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 16319 20378 EEIVQFFQGL True H1975_Epitope_Rep1 1208.6077392839998 1208.60664993586 84.752 2 0.1915613256685284 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3'] 106153 17174 SVPDPELIKTV True PC9_epitope_Rep5 1196.66525416012 1196.66414993586 71.082 2 0.19154480991462836 0.0006801564359802754 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 35612 11263 GTLEQWIEK True NCI_RA007_Epitope_Rep3 1102.56587447202 1102.56476993586 51.418 2 0.19154464944960464 0.0006801564359802754 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 77491 12155 NYPQSVPRL True PC9_epitope_Rep4 1072.56654317836 1072.5654499358602 54.572 2 0.19154377080899057 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 105939 14710 SVLEPPLFLK True NCI_RA007_Epitope_Rep4 1141.6746966450098 1141.67358993586 64.004 2 0.19153316980030807 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 71981 18302 MQAERIFSEV True PC9_epitope_Rep1 1208.5859582936 1208.58486993586 75.187 2 0.191533046390557 0.0006801564359802754 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 67500 13070 LTELMFEHY True H1975_Epitope_Rep3 1181.54269649929 1181.5415899358602 55.516 2 0.1915229990846015 0.0006801564359802754 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 17238 8235 EHALGTPEV True PC9_epitope_Rep4 951.4661604307499 951.46506993586 39.138 2 0.19150526243256408 0.0006801564359802754 0.9438714419765777 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX', 'nc|ENSG00000114439|Q8WY36-3|BBX'] 43359 17703 IHLIDPNTL True PC9_epitope_Rep4 1034.5760452329 1034.57494993586 76.119 2 0.1914981614015467 0.0006801564359802754 0.9438714419765777 ['ENSG00000169251|ENST00000351193|NMD3', 'NMD3|p.E344Kfs*10|1|0.18|ENSG00000169251|chr3:161246345-161246345|G/-|frameshift_variant', 'ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 89458 5486 REQEITAVQA True H1975_Epitope_Rep1 1143.58840082175 1143.58730993586 26.163 2 0.19149402384949993 0.0006801564359802754 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 106698 15135 SYAQYVHNL True PC9_epitope_Rep1 1093.51925863277 1093.5181699358602 63.038 2 0.19149217938905383 0.0006801564359802754 0.9438714419765777 ['ENST00000544140.5_1_11:73555872-73571072:+|nuORF', 'nc|ENSG00000175581|Q96GC5-3|MRPL48', 'ENSG00000175581|ENST00000310614|MRPL48', 'ENST00000543374.1_1_11:73555872-73556061:+|nuORF'] 2379 10618 AEQIARWIA True H1975_Epitope_Rep1 1056.5716285587998 1056.5705299358601 45.799 2 0.19148700452914705 0.0006801564359802754 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 77559 19662 NYSNIRFQF True PC9_epitope_Rep1 1187.57235683479 1187.5712499358601 80.454 2 0.19148601238719992 0.0006801564359802754 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 104897 8499 STFNQVVLK True NCI_RA007_Epitope_Rep4 1034.5760452328998 1034.57494993586 39.493 2 0.19147786537286282 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 21647 7629 ERTQENVTL True PC9_epitope_Rep5 1088.5462016565998 1088.5451099358602 34.291 2 0.19147451433133178 0.0006801564359802754 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 138529 13221 YRLLPGPSA True PC9_epitope_Rep4 972.5392658013599 972.53816993586 58.751 2 0.19147097978341063 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 24505 23003 FAISILQQL True PC9_epitope_Rep5 1031.60153170475 1031.6004299358601 93.471 2 0.19146822068346728 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 4755 6897 ALEEAMEQK True PC9_epitope_Rep3 1047.4906609264297 1047.4895699358601 31.544 2 0.19146705091149474 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 119123 7608 VEILANDQGNR True PC9_epitope_Rep1 1227.6207635791898 1227.6196699358602 34.084 2 0.19146417320570655 0.0006801564359802754 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 49377 22001 KIIDIFTTL True PC9_epitope_Rep5 1062.6324974798601 1062.6314099358601 89.652 2 0.19146168128558136 0.0006801564359802754 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant', 'DNAH5|p.A481T|1|0.13|ENSG00000039139|chr5:13913838-13913838|C/T|missense_variant'] 113163 18014 TQDAVPLTL True PC9_epitope_Rep6 956.51786165044 956.51676993586 81.918 2 0.19146157853505794 0.0006801564359802754 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 132748 22285 VYSLQQFGF True PC9_epitope_Rep2 1087.53384606775 1087.53274993586 91.197 2 0.1914611609947229 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 87649 19285 QVAFDFTKV True PC9_epitope_Rep2 1053.54949613189 1053.54838993586 79.554 2 0.1914536110350156 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 65184 15334 LSDVFPGVQY True H1975_Epitope_Rep3 1123.5549754351498 1123.5538699358601 64.393 2 0.191434170837826 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 10010 14648 AYTLLLHTW True NCI_RA007_Epitope_Rep3 1116.59678067748 1116.59568993586 64.987 2 0.19143349242236343 0.0006801564359802754 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 87840 9003 QVISQAAVVHA True PC9_epitope_Rep6 1121.61930702721 1121.61820993586 44.657 2 0.19142897976727566 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 103516 12770 SRDDNM[Oxidation]FQI True PC9_epitope_Rep1 1140.48697290876 1140.4858699358601 53.994 2 0.191423526453293 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 75454 20149 NQIEDNDDFQL True PC9_epitope_Rep1 1349.57353860325 1349.57244993586 82.332 2 0.19142274703026257 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 38480 11910 HHALPITDL True PC9_epitope_Rep4 1015.54507945779 1015.5439899358599 53.59 2 0.19141504438149076 0.0006801564359802754 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 53214 10643 KTDHFIFTY True H1975_Epitope_Rep3 1170.57095985246 1170.5693249037902 46.011 3 0.1914046263173967 0.0006801564359802754 0.9438714419765777 ['ENSG00000116212|ENST00000371370|LRRC42'] 54001 12169 KYLEERAMRQF True PC9_epitope_Rep5 1469.74491854649 1469.74327490379 51.797 3 0.19139426794523406 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 13898 15400 DRDPEFYKF True PC9_epitope_Rep3 1215.5560380643099 1215.55438490379 64.392 3 0.19139380841542522 0.0006801564359802754 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 5480 20790 AMIELVERL True PC9_epitope_Rep1 1072.59506642532 1072.59396993586 84.799 2 0.19139288097772142 0.0006801564359802754 0.9438714419765777 ['ENSG00000166326|ENST00000299413|TRIM44'] 56208 19612 LDPHLVLDQLR True PC9_epitope_Rep5 1317.7404847890498 1317.73882490379 80.49 3 0.19138799593348674 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 102864 15110 SQHGVIIQL True PC9_epitope_Rep2 993.5607295219299 993.55962993586 63.377 2 0.19138571739400745 0.0006801564359802754 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 24001 17124 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 71.115 2 0.1913844386570402 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 9019 9243 AVIGADSVTLK True NCI_RA007_Epitope_Rep1 1072.61282466444 1072.61172993586 39.951 2 0.19138304626529246 0.0006801564359802754 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000477860.1_1_17:30200326-30200766:-|nuORF'] 103347 14640 SQVEILQRV True PC9_epitope_Rep1 1070.6084079903399 1070.60730993586 61.135 2 0.19138077695389513 0.0006801564359802754 0.9438714419765777 ['ENSG00000117318|ENST00000374561|ID3'] 75734 6844 NQWDGTQHGV True PC9_epitope_Rep6 1140.49483479008 1140.49372993586 35.197 2 0.19137611595098386 0.0006801564359802754 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 116470 12314 TYAPAIHQI True PC9_epitope_Rep5 1012.5341804209202 1012.53308993586 52.357 2 0.1913570868121094 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant'] 92076 6781 RPSPPVQSV True PC9_epitope_Rep5 965.52942939365 965.52832993586 31.054 2 0.19134564977107746 0.0006801564359802754 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 129670 14236 VTIEDVQKL True PC9_epitope_Rep6 1043.58627556343 1043.5851699358602 66.65 2 0.19133884893039158 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 48467 15950 KEENSPPWIVF True H1975_Epitope_Rep2 1344.67140216972 1344.6703099358601 66.55 2 0.19132212716656824 0.0006801564359802754 0.9438714419765777 ['HCN3|p.E193Sfs*24|1|0.17|ENSG00000143630|chr1:155282708-155282708|G/-|frameshift_variant', 'ENST00000496230.5_1_1:155247534-155253965:+|nuORF', 'ENSG00000143630|ENST00000368358|HCN3'] 87037 5137 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 24.836 2 0.19131791143017385 0.0006801564359802754 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 132942 23196 VYTVVDEMFL True PC9_epitope_Rep3 1214.5893123385397 1214.58820993586 94.493 2 0.19131234378693382 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 24744 17080 FAYDGKDYL True PC9_epitope_Rep3 1090.4971262058598 1090.4960299358602 70.85 2 0.19130551808129737 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 75809 12693 NRDDSNLYI True PC9_epitope_Rep3 1108.51490152832 1108.51380993586 53.848 2 0.1913044897232222 0.0006801564359802754 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 128442 4025 VSELKEELKK True NCI_RA007_Epitope_Rep2 1201.69180326113 1201.69015490379 20.294 3 0.19130264320687926 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF'] 127128 18447 VQDELHSVLGL True PC9_epitope_Rep6 1208.64010204144 1208.63900993586 83.6 2 0.19130215359263292 0.0006801564359802754 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 77239 19880 NYIKDLNIL True PC9_epitope_Rep2 1104.61791004488 1104.6168099358601 81.861 2 0.19130082600242926 0.0006801564359802754 0.9438714419765777 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 39971 11867 HQQSIPAVL True PC9_epitope_Rep4 991.5450794577898 991.5439899358599 53.422 2 0.19129763745393627 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 87042 6022 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep3 1128.43935401 1128.43824993586 28.177 2 0.19129640258302222 0.0006801564359802754 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 40288 12724 HRQEIQVVL True PC9_epitope_Rep1 1120.63529144452 1120.6341899358601 53.817 2 0.19129445191324193 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 74750 18933 NLLPKLHIV True PC9_epitope_Rep5 1045.66480066765 1045.6637099358602 77.849 2 0.1912906142968136 0.0006801564359802754 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 93594 6076 RSYHLQIVTK True NCI_RA007_Epitope_Rep2 1243.7037053575098 1243.70206490379 28.241 3 0.1912892528666121 0.0006801564359802754 0.9438714419765777 ['ENSG00000131203|ENST00000518237|IDO1'] 103689 9094 SRDQSTPII True PC9_epitope_Rep5 1015.5298233164699 1015.52872993586 39.926 2 0.19128798744872588 0.0006801564359802754 0.9438714419765777 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 31558 9401 GEFRQGLISA True NCI_RA007_Epitope_Rep1 1076.56145779792 1076.56036993586 40.56 2 0.1912831784884123 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 111958 7128 TLSDYNIQK True NCI_RA007_Epitope_Rep1 1080.54513902744 1080.5440499358601 31.716 2 0.19126615050033494 0.0006801564359802754 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000392399.3_1_2:137087013-137087097:-|nuORF', 'ENST00000597285.1_1_19:7730614-7730836:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 99176 20216 SLAQYLINV True PC9_epitope_Rep6 1019.5651461960299 1019.56404993586 90.438 2 0.19125716267010343 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 113855 14240 TREGGSIPVTL True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 59.778 2 0.19125599216727823 0.0006801564359802754 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 16366 7861 EELEAALQR True H1975_Epitope_Rep3 1057.5403880001697 1057.53928993586 35.213 2 0.1912471589021912 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF'] 114420 18982 TSDTQWGWFY True H1975_Epitope_Rep2 1289.53530261973 1289.5342099358602 78.796 2 0.19124662037052162 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'nc|ENSG00000111224|Q9NR21-5|PARP11'] 31797 15184 GEMDPNFISV True H1975_Epitope_Rep2 1107.49066092643 1107.4895699358601 63.562 2 0.19124450717496036 0.0006801564359802754 0.9438714419765777 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 98006 9918 SHSSFQASL True PC9_epitope_Rep1 962.44575933934 962.44466993586 43.009 2 0.1912412446168522 0.0006801564359802754 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 67568 8153 LTEQYNEQY True H1975_Epitope_Rep3 1186.51423282198 1186.5131299358602 36.34 2 0.19123793158710495 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 103716 5006 SREESAGPAL True PC9_epitope_Rep2 1015.4934378077497 1015.49234993586 24.626 2 0.19122732150116276 0.0006801564359802754 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 9937 19495 AYQHLFYLL True PC9_epitope_Rep6 1166.6124307416198 1166.61132993586 87.649 2 0.19122421614994825 0.0006801564359802754 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 106466 19249 SVVESVFKL True PC9_epitope_Rep4 1006.5698972232999 1006.56880993586 82.144 2 0.19122325424466013 0.0006801564359802754 0.9438714419765777 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 132108 12138 VYINTAQEF True NCI_RA007_Epitope_Rep5 1083.5236753068698 1083.52256993586 53.343 2 0.19119297692578693 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 75918 9754 NRDTQETLL True PC9_epitope_Rep5 1088.5462016566 1088.5451099358602 42.489 2 0.19118599777386952 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197905|Q15561-2|TEAD4', 'nc|ENSG00000187079|P28347-2|TEAD1', 'nc|ENSG00000197905|Q15561-3|TEAD4', 'ENSG00000187079|ENST00000527636|TEAD1', 'ENSG00000197905|ENST00000359864|TEAD4'] 53962 13498 KYITQGQLLQF True NCI_RA007_Epitope_Rep5 1337.73433677945 1337.7332299358602 58.603 2 0.1911844149076004 0.0006801564359802754 0.9438714419765777 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5'] 992 10597 AEAEAWYQTK True PC9_epitope_Rep5 1195.5509526838698 1195.54984993586 45.749 2 0.1911800084366988 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF'] 28914 12379 FTEEQAVLY True H1975_Epitope_Rep3 1098.5233409536997 1098.5222499358601 52.802 2 0.19117763472775678 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 72658 20838 MWSPTHPALF True PC9_epitope_Rep1 1185.5641006502099 1185.56300993586 84.982 2 0.19117460033386258 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 103607 14363 SRDKTIIMW True PC9_epitope_Rep2 1148.60121443492 1148.59957490379 60.509 3 0.191172042766563 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 7834 7293 ATAGIIGVNR True NCI_RA007_Epitope_Rep2 970.5559784946599 970.55488993586 32.989 2 0.19117119850858702 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 77029 21664 NVVEQFLQA True PC9_epitope_Rep5 1046.53965972418 1046.53856993586 88.377 2 0.1911639902999475 0.0006801564359802754 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25'] 24329 10466 FADLSEAANR True PC9_epitope_Rep1 1092.5199869087598 1092.5188899358602 45.147 2 0.19116113943132323 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 39673 10896 HPTEDLVVSA True PC9_epitope_Rep3 1066.5294889632999 1066.52838993586 46.894 2 0.1911528159360573 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 45209 15247 IRKPYIWEY True PC9_epitope_Rep2 1266.67609362734 1266.6749899358601 63.92 2 0.19114445369619903 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 36843 14698 GVPTGFILPIR True H1975_Epitope_Rep3 1168.6968290719199 1168.69572993586 61.908 2 0.19111802264789693 0.0006801564359802754 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 30131 17310 FYQPKIQQF True PC9_epitope_Rep1 1197.61824439805 1197.6171499358602 71.399 2 0.19111641313629107 0.0006801564359802754 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 64531 8255 LRDEHNYTL True PC9_epitope_Rep3 1159.56218607391 1159.56055490379 36.729 3 0.19111550083821682 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 52503 11119 KPNPNQIISV True PC9_epitope_Rep4 1108.62405805448 1108.62296993586 50.547 2 0.19110791399924776 0.0006801564359802754 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 88863 5360 REAEFTKSIA True NCI_RA007_Epitope_Rep4 1150.59823722946 1150.5971499358602 27.185 2 0.19109049372718367 0.0006801564359802754 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 54254 19781 KYPENFFLL True PC9_epitope_Rep6 1169.61209638845 1169.61098993586 88.744 2 0.19108876019151239 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 34937 9489 GQWKKGFVL True NCI_RA007_Epitope_Rep2 1061.6022004110898 1061.6011099358602 41.523 2 0.19108571109270714 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 71969 14453 MPWGDPNYRSA True PC9_epitope_Rep2 1292.5608061749201 1292.5597099358602 60.863 2 0.19108550578599065 0.0006801564359802754 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 87465 11882 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep2 1318.5751192068199 1318.5740299358602 50.784 2 0.19107710919124826 0.0006801564359802754 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 18632 6418 ELAM[Oxidation]PGEDLK True H1975_Epitope_Rep3 1117.5325261188498 1117.5314299358602 29.663 2 0.19107320015301016 0.0006801564359802754 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM', 'ENST00000569217.1_1_16:28854298-28855510:-|nuORF'] 53405 18757 KVFDPVPVGV True PC9_epitope_Rep3 1055.60153170475 1055.6004299358601 77.369 2 0.19107138494980272 0.0006801564359802754 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 25296 5205 FEEESKEPVA True H1975_Epitope_Rep2 1163.53463391339 1163.53352993586 25.092 2 0.19106759951015015 0.0006801564359802754 0.9438714419765777 ['ENSG00000074201|ENST00000525428|CLNS1A'] 138932 13907 YSEEIVEMY True H1975_Epitope_Rep2 1161.4899922200898 1161.48888993586 58.64 2 0.1910586637485306 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 18020 15335 EIIDLVLDR True NCI_RA007_Epitope_Rep2 1084.61282466444 1084.61172993586 64.346 2 0.1910522529468504 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 107310 13339 SYREDPIVY True PC9_epitope_Rep1 1140.5451390274397 1140.5440499358601 56.168 2 0.19103588239409863 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 76247 12544 NSDELQELY True H1975_Epitope_Rep3 1109.48768372097 1109.4871749679298 53.45 1 0.19103073712074603 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160209|O00764-2|PDXK', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 119478 5695 VEQENHLMAA True H1975_Epitope_Rep3 1140.52335803704 1140.52226993586 26.936 2 0.19103050874385819 0.0006801564359802754 0.9438714419765777 ['ENSG00000185246|ENST00000355765|PRPF39'] 28022 18507 FRADDTFEAL True PC9_epitope_Rep2 1183.55095268387 1183.54984993586 76.525 2 0.19102968478626373 0.0006801564359802754 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 102038 6103 SPPPPPPPP True NCI_RA007_Epitope_Rep4 881.4647038787699 881.46360993586 30.09 2 0.19102658827511243 0.0006801564359802754 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 108211 5812 TEADSGYTP True H1975_Epitope_Rep2 939.3821560232699 939.38160496793 27.347 1 0.19102428021009857 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000064490|O14593-2|RFXANK', 'nc|ENSG00000064490|O14593-3|RFXANK', 'ENSG00000064490|ENST00000303088|RFXANK'] 83319 14027 QALLDLHAL True NCI_RA007_Epitope_Rep4 992.5654805492001 992.56438993586 61.238 2 0.19102127773097197 0.0006801564359802754 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 40590 8253 HTDGNNIYV True PC9_epitope_Rep5 1031.4672230599099 1031.4661299358602 36.686 2 0.19101780992045075 0.0006801564359802754 0.9438714419765777 ['ENSG00000048405|ENST00000265827|ZNF800'] 140741 18637 YYQNYFEKL True PC9_epitope_Rep2 1266.5920892198599 1266.59098993586 77.052 2 0.19100785073757923 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 47221 20194 IYDKFIAQL True PC9_epitope_Rep3 1109.6120963884498 1109.61098993586 82.935 2 0.19100295519747473 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 14050 8654 DSDFRKDDFY True H1975_Epitope_Rep3 1306.5465955794198 1306.5454899358601 38.284 2 0.19100205911201076 0.0006801564359802754 0.9438714419765777 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 13404 8799 DNLAEDIM[Oxidation]R True NCI_RA007_Epitope_Rep1 1091.49172393603 1091.4906299358602 38.229 2 0.19099974728065774 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 107342 19184 SYRQVAFDF True PC9_epitope_Rep1 1131.5349086969097 1131.53380993586 78.586 2 0.19099426023315139 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 94733 17316 RYLGKVLEL True PC9_epitope_Rep3 1089.65462990677 1089.6535299358602 71.781 2 0.19098779625630175 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000573641.1_1_17:2598433-2598937:-|nuORF'] 53425 6090 KVHVIFNYK True NCI_RA007_Epitope_Rep1 1146.65496425994 1146.65332490379 27.725 3 0.19098387049460352 0.0006801564359802754 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 64114 4882 LQEEM[Oxidation]LQR True NCI_RA007_Epitope_Rep2 1061.51754476105 1061.51644993586 23.612 2 0.19097476299920949 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'VIM|p.E187G|1|0.33|ENSG00000026025|chr10:17229982-17229982|A/G|missense_variant'] 124323 13514 VLDPYLLKY True H1975_Epitope_Rep1 1122.63249747986 1122.6314099358601 57.102 2 0.19097397519928497 0.0006801564359802754 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 27653 19191 FQDDNNLYL True PC9_epitope_Rep4 1140.50875351872 1140.5076499358602 81.917 2 0.19097354476588246 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 43398 10483 IHSENFQTL True PC9_epitope_Rep4 1087.5298233164701 1087.5287299358602 48.039 2 0.19097018620374623 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 140677 12801 YYPSTPGRYSI True PC9_epitope_Rep6 1302.6244519773 1302.62334993586 60.738 2 0.19096388296161304 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 138289 14860 YQYPVIIHL True H1975_Epitope_Rep2 1144.6280808057597 1144.6269899358601 62.312 2 0.19094315247284618 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 77612 15191 NYVEKGFQI True PC9_epitope_Rep2 1096.5553097883198 1096.5542099358602 63.693 2 0.19094076021995968 0.0006801564359802754 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 74657 9107 NLGGGVVTIER True NCI_RA007_Epitope_Rep2 1113.61422164677 1113.6131299358601 40.03 2 0.1909392189549331 0.0006801564359802754 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 5011 20189 ALLDRIVSV True PC9_epitope_Rep3 984.59678067748 984.59568993586 82.915 2 0.1909344374141051 0.0006801564359802754 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 113912 13455 TRIGLETSL True PC9_epitope_Rep4 988.55530978832 988.55420993586 59.652 2 0.19093228433973652 0.0006801564359802754 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 26011 12333 FHDESTQVQL True PC9_epitope_Rep1 1202.5567663402999 1202.5556699358601 52.296 2 0.19092799498799481 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 27702 13688 FQDKDQVFI True PC9_epitope_Rep6 1138.56587447202 1138.56476993586 64.436 2 0.19092754737577552 0.0006801564359802754 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 139231 9282 YTADGKEVLEY True H1975_Epitope_Rep2 1286.6030478263801 1286.6019499358601 40.661 2 0.19091997995819 0.0006801564359802754 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 45860 11764 ISQIVSSITAS True NCI_RA007_Epitope_Rep2 1104.60265390356 1104.60154993586 50.357 2 0.19091725528716608 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 7098 6659 AQYEDIANR True PC9_epitope_Rep2 1078.5043368446197 1078.5032299358602 31.02 2 0.19091616025220184 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 32057 8731 GEVREDLRLP True H1975_Epitope_Rep2 1182.6356853673399 1182.63403490379 38.545 3 0.19091530736676618 0.0006801564359802754 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A'] 115603 21131 TVIKDLLGL True PC9_epitope_Rep2 970.6062827320198 970.60518993586 86.74 2 0.19091300529276795 0.0006801564359802754 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61705957-61719950:-|nuORF'] 109579 9147 THDDSHLVSL True PC9_epitope_Rep2 1122.5305515924601 1122.5289149037899 40.524 3 0.1909097118587779 0.0006801564359802754 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 102507 9935 SPYSGPKFNSA True PC9_epitope_Rep1 1153.54038800017 1153.53928993586 43.077 2 0.19090787671890114 0.0006801564359802754 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 73515 9384 NFGIGQDIQPK True NCI_RA007_Epitope_Rep5 1215.62478633047 1215.62368993586 42.735 2 0.19090446303478256 0.0006801564359802754 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 99965 22008 SLINVGLISV True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 92.874 2 0.19090134031796874 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 53251 13976 KTFSEILNRV True PC9_epitope_Rep4 1205.67682190333 1205.67572993586 61.664 2 0.1909011987093801 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 113538 11298 TQVEASEESAL True PC9_epitope_Rep2 1162.5353621893798 1162.53426993586 48.781 2 0.19089885681074373 0.0006801564359802754 0.9438714419765777 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 106195 12995 SVPIDLQKV True PC9_epitope_Rep6 997.58079626017 997.57968993586 61.561 2 0.1908952664380373 0.0006801564359802754 0.9438714419765777 ['ENSG00000198056|ENST00000338193|PRIM1'] 116867 14651 TYNPAFSRL True PC9_epitope_Rep1 1067.53999407735 1067.5388899358602 61.177 2 0.19089421150809913 0.0006801564359802754 0.9438714419765777 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 94772 12170 RYLPQCSYF True NCI_RA007_Epitope_Rep3 1175.5433652056302 1175.54226993586 54.994 2 0.19089373857893757 0.0006801564359802754 0.9438714419765777 ['ENSG00000118971|ENST00000261254|CCND2', 'CCND2|p.A120Rfs*28|2|0.44|ENSG00000118971|chr12:4276165-4276165|C/-|frameshift_variant', 'nc|ENSG00000118971|P30279-2|CCND2'] 26083 17915 FHEGDVITL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 73.703 2 0.19089039746930483 0.0006801564359802754 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 90597 6925 RKINQDGTFL True NCI_RA007_Epitope_Rep4 1190.64077074778 1190.6396699358602 33.258 2 0.19089010480753962 0.0006801564359802754 0.9438714419765777 ['ENSG00000043462|ENST00000046794|LCP2'] 127529 14028 VQVGETFKV True PC9_epitope_Rep5 1005.5494961318899 1005.54838993586 58.975 2 0.19088726627664318 0.0006801564359802754 0.9438714419765777 ['ENSG00000141646|ENST00000342988|SMAD4', 'SMAD4|p.D415Efs*20|1|0.15|ENSG00000141646|chr18:51067121-51067124|AGAC/-|frameshift_variant'] 140663 15025 YYPSTPGRYSI True PC9_epitope_Rep1 1302.6244519773 1302.62334993586 62.614 2 0.19088289279172377 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 77550 22037 NYSGAAEYLYF True PC9_epitope_Rep5 1296.56626839484 1296.56516993586 89.792 2 0.1908756803977738 0.0006801564359802754 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 123396 17742 VIDIMENLY True H1975_Epitope_Rep2 1108.54744752656 1108.54634993586 73.566 2 0.1908682697568822 0.0006801564359802754 0.9438714419765777 ['ENSG00000107968|ENST00000263056|MAP3K8'] 136356 6416 YHDEADQSAL True PC9_epitope_Rep2 1147.47818166643 1147.47708993586 30.087 2 0.19086118922967119 0.0006801564359802754 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 94976 13442 RYQDAIRVF True PC9_epitope_Rep2 1166.6196413803798 1166.61854993586 56.985 2 0.1908570885718122 0.0006801564359802754 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 65182 15552 LSDVFPGVQY True H1975_Epitope_Rep2 1123.5549754351498 1123.5538699358601 64.976 2 0.19085299086577254 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 113777 18107 TRDQFLDTL True PC9_epitope_Rep1 1107.5560380643099 1107.5549499358601 74.441 2 0.19084903244639645 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 34816 14448 GQVAYLEKL True PC9_epitope_Rep4 1019.5651461960299 1019.56404993586 63.483 2 0.19084667304874658 0.0006801564359802754 0.9438714419765777 ['ENSG00000167306|ENST00000285039|MYO5B', 'ENSG00000128833|ENST00000261839|MYO5C', 'ENST00000560809.5_1_15:52532054-52548856:-|nuORF', 'ENST00000558902.5_1_15:52529812-52548856:-|nuORF', 'nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 28653 15476 FSSPHLVQV True PC9_epitope_Rep1 1012.5341804209198 1012.53308993586 64.349 2 0.19084059691620933 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 2408 10148 AEQLIQEAC True H1975_Epitope_Rep2 1003.4644461785899 1003.46334993586 44.033 2 0.19083594134735715 0.0006801564359802754 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 23796 12842 EYLDDRNTF True PC9_epitope_Rep4 1171.51456717515 1171.51346993586 57.262 2 0.19082138900958986 0.0006801564359802754 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.H214R|4|0.56|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant', 'TP53|p.R213G|1|0.52|ENSG00000141510|chr17:7674894-7674894|G/C|missense_variant', 'TP53|p.R213L|1|0.15|ENSG00000141510|chr17:7674893-7674893|C/A|missense_variant'] 21801 16521 ESDLPDELLY True H1975_Epitope_Rep2 1192.54994962436 1192.54884993586 68.769 2 0.1908184907104041 0.0006801564359802754 0.9438714419765777 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 70178 20535 LYLKALEGF True PC9_epitope_Rep2 1052.5906326678798 1052.5895299358601 84.42 2 0.1908156483300795 0.0006801564359802754 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 89777 16630 RFEEAHFTF True PC9_epitope_Rep1 1182.5458077337796 1182.54415490379 68.796 3 0.19081553980600896 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 38476 12559 HHALPITDL True PC9_epitope_Rep2 1015.54507945779 1015.5439899358599 53.615 2 0.19081463858533418 0.0006801564359802754 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 14260 5467 DSYVGDEAQSK True PC9_epitope_Rep1 1197.51496109797 1197.5138699358602 25.859 2 0.1908078062638544 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 62219 17562 LLPSRQFGF True PC9_epitope_Rep4 1063.5814649665099 1063.58036993586 75.57 2 0.19080280056283086 0.0006801564359802754 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 23164 8461 EVPAVPETLK True H1975_Epitope_Rep1 1081.60192562757 1081.60082993586 37.474 2 0.19080228628296 0.0006801564359802754 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7'] 72023 18381 MQLEDLKQQL True PC9_epitope_Rep5 1244.64347316972 1244.6423699358602 75.721 2 0.19079434164409095 0.0006801564359802754 0.9438714419765777 ['ENSG00000269335|ENST00000594239|IKBKG', 'nc|ENSG00000269335|Q9Y6K9-2|IKBKG'] 115426 20292 TVFDEAIRAV True PC9_epitope_Rep1 1119.59242357303 1119.5913299358601 82.88 2 0.19079313588734112 0.0006801564359802754 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 53314 5979 KTNAIISLK True NCI_RA007_Epitope_Rep4 986.61243074162 986.61132993586 29.618 2 0.19079223265341377 0.0006801564359802754 0.9438714419765777 ['ENST00000539028.1_1_12:10010098-10010200:-|nuORF'] 36436 12430 GVIGQDGLLFK True NCI_RA007_Epitope_Rep3 1145.6444591458899 1145.6433699358602 56.107 2 0.19079086575048707 0.0006801564359802754 0.9438714419765777 ['ENSG00000107371|ENST00000327304|EXOSC3', 'ENST00000465860.5_1_9:37781981-37784738:-|nuORF'] 127091 12439 VQANSGAIVKL True PC9_epitope_Rep5 1098.6397081186199 1098.6386099358601 52.848 2 0.19079064843572047 0.0006801564359802754 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 20686 21140 EQIKDIFYI True PC9_epitope_Rep3 1167.6175756917098 1167.61646993586 86.6 2 0.19079038221516978 0.0006801564359802754 0.9438714419765777 ['ENSG00000164902|ENST00000297540|PHAX'] 36610 19645 GVLKVFLENV True PC9_epitope_Rep6 1116.6542955536 1116.6531899358602 88.223 2 0.19078968744565877 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 95071 17462 RYSNLILNLF True NCI_RA007_Epitope_Rep3 1251.69755734791 1251.69646993586 76.615 2 0.1907855216525714 0.0006801564359802754 0.9438714419765777 ['ENSG00000078142|ENST00000262039|PIK3C3', 'ENST00000587328.2_1_18:39644671-39661098:+|nuORF'] 38221 11104 HEVIVSFTP True H1975_Epitope_Rep2 1027.53384606775 1027.53274993586 47.746 2 0.190780483576219 0.0006801564359802754 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF'] 86596 14305 QRDFNSELL True PC9_epitope_Rep2 1120.5512870370399 1120.55018993586 60.288 2 0.19077885479463655 0.0006801564359802754 0.9438714419765777 ['ENSG00000042429|ENST00000251871|MED17'] 88921 8454 REDDVPFTA True H1975_Epitope_Rep3 1048.48253877088 1048.4814499358602 37.503 2 0.1907722364760205 0.0006801564359802754 0.9438714419765777 ['ENSG00000103148|ENST00000611875|NPRL3'] 53990 7887 KYLDNPNAL True NCI_RA007_Epitope_Rep5 1046.53965972418 1046.53856993586 37.031 2 0.19077201789557433 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 48709 4651 KEMPTVAQA True NCI_RA007_Epitope_Rep3 973.4902670036098 973.48916993586 25.217 2 0.19076608893446803 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 35760 15642 GTVEIFPIFK True NCI_RA007_Epitope_Rep4 1149.6433965167298 1149.6422899358602 67.944 2 0.19076597955077856 0.0006801564359802754 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 22217 9676 ETDKNGFLQY True H1975_Epitope_Rep1 1213.5615173675699 1213.5604299358602 42.143 2 0.1907659532237448 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 64050 13461 LQDPNHLTL True PC9_epitope_Rep2 1049.55055876105 1049.54946993586 57.056 2 0.19076579744934782 0.0006801564359802754 0.9438714419765777 ['KCTD21|p.H177R|1|0.41|ENSG00000188997|chr11:78174025-78174025|T/C|missense_variant', 'ENSG00000188997|ENST00000340067|KCTD21'] 34497 7190 GQDVGRYQV True PC9_epitope_Rep2 1020.49885754136 1020.49776993586 33.048 2 0.19075994294533144 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 2022 7145 AELATRALP True NCI_RA007_Epitope_Rep3 940.5341804209199 940.53308993586 35.224 2 0.19075693092094198 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 75633 11363 NQSEATFRL True PC9_epitope_Rep4 1064.5250722892 1064.5239699358601 51.481 2 0.1907548138093079 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 55466 14999 LAVDAVIAELK True H1975_Epitope_Rep3 1140.675424921 1140.6743299358602 63.083 2 0.1907541993262963 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 132259 18249 VYKVVGNLL True PC9_epitope_Rep5 1003.6066170851898 1003.60552993586 75.21 2 0.19075373118783512 0.0006801564359802754 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.E1166K|1|0.16|ENSG00000183856|chr1:156535174-156535174|C/T|missense_variant'] 385 5452 AALEDKNSL True NCI_RA007_Epitope_Rep4 959.49237517859 959.49126993586 27.55 2 0.19074093282395638 0.0006801564359802754 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA1-ALDH3B1|1|fusion'] 69491 11314 LVSESSDVLPK True PC9_epitope_Rep3 1172.6288686514001 1172.6277699358602 48.525 2 0.19074032922919879 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 2147 8462 AELWKNPTA True H1975_Epitope_Rep3 1028.52909504048 1028.5279899358602 37.533 2 0.19074019999454883 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|494|14.5|0.62|4.54|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C', 'chr20:45815540-45815854|495|17.2|0.56|4.94|+|ENST00000617055|UBE2C,UBE2C', 'nc|ENSG00000175063|O00762-3|UBE2C', 'nc|ENSG00000175063|O00762-4|UBE2C', 'chr20:45814470-45815390|498|22.16|0.65|5.09|+|ENST00000335046|UBE2C,UBE2C'] 128305 11366 VSCRITDLY True H1975_Epitope_Rep2 1068.52738078832 1068.5262899358602 48.768 2 0.190740085344975 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 132097 21569 VYILQPEVI True PC9_epitope_Rep2 1072.6168474157198 1072.61574993586 88.437 2 0.19073942158517299 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 109407 21201 TGPTRFFLF True PC9_epitope_Rep2 1084.5705659296398 1084.56946993586 87.007 2 0.19073126196224455 0.0006801564359802754 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 77354 22618 NYLLYVSNF True PC9_epitope_Rep1 1131.5600608155898 1131.5589699358602 91.809 2 0.19073057252927056 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 56992 11098 LEEDVIYHV True H1975_Epitope_Rep2 1115.5498900547102 1115.5487899358602 47.724 2 0.1907237543679314 0.0006801564359802754 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 28580 11169 FSNPRALYL True H1975_Epitope_Rep2 1079.5763795860698 1079.5752899358602 47.998 2 0.19072354833407693 0.0006801564359802754 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.Q1049Lfs*8|1|0.14|ENSG00000120800|chr12:101327183-101327186|CCAA/-|frameshift_variant'] 43733 20830 IITDLLRSV True PC9_epitope_Rep1 1028.62299542532 1028.62188993586 84.95 2 0.19071691587204065 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162613|Q96AE4-2|FUBP1', 'ENSG00000162613|ENST00000370768|FUBP1', 'FUBP1|p.Q546Hfs*15|1|0.43|ENSG00000162613|chr1:77956623-77956639|GTGGCTGTGCTTGCTGT/-|frameshift_variant'] 69853 20383 LYANMFERL True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 83.226 2 0.1907109604603936 0.0006801564359802754 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 35507 6831 GTGIVSAPVPK True NCI_RA007_Epitope_Rep5 1024.59169529704 1024.5905899358602 32.96 2 0.19070842082448966 0.0006801564359802754 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 126499 13732 VPNKFLVTA True PC9_epitope_Rep1 987.5753169569099 987.57420993586 57.667 2 0.19070467248516149 0.0006801564359802754 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 64553 18571 LRDGQILEL True PC9_epitope_Rep3 1055.59750895347 1055.59640993586 76.658 2 0.19070369629064318 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 27628 21439 FQAEIAQLM True PC9_epitope_Rep1 1049.52156713189 1049.52046993586 87.304 2 0.19070005584617122 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 47404 11924 IYIKHPHLF True PC9_epitope_Rep4 1166.66004964038 1166.6584049037901 53.65 3 0.19069524474647334 0.0006801564359802754 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 60652 12926 LITPAVVSER True PC9_epitope_Rep1 1083.62880908175 1083.6277099358601 54.592 2 0.19069143126469004 0.0006801564359802754 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 1632 7875 AEFVEVTK True PC9_epitope_Rep4 921.4807478657299 921.47964993586 37.718 2 0.19068626840695826 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 14583 6077 DVGKDQEFTVK True NCI_RA007_Epitope_Rep2 1264.6299312805597 1264.62829490379 28.244 3 0.19068610966855712 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 9004 16330 AVIDVGINRV True PC9_epitope_Rep1 1054.61349337078 1054.6123899358602 67.632 2 0.19068590772110514 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 14649 9635 DVNAAIATIK True NCI_RA007_Epitope_Rep2 1014.57095985246 1014.5703749679301 42.093 1 0.19068179532145177 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 9252 6429 AVQQPFINK True NCI_RA007_Epitope_Rep5 1043.5763795860698 1043.5752899358602 31.398 2 0.19067954659473987 0.0006801564359802754 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 138393 12425 YRDPNTIETL True PC9_epitope_Rep2 1220.60371653272 1220.60260993586 53.1 2 0.19066996566756308 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 45990 10762 ISTEVNPKL True PC9_epitope_Rep1 999.56006081559 999.55896993586 46.283 2 0.1906675348422918 0.0006801564359802754 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 96075 7227 SEDEKQQYLP True H1975_Epitope_Rep2 1235.56699667083 1235.56588993586 32.732 2 0.19065584600189445 0.0006801564359802754 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 75472 16855 NQIKEFIYA True PC9_epitope_Rep3 1124.5866099165999 1124.58550993586 69.987 2 0.19064566889714496 0.0006801564359802754 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 61234 10518 LLDPTQKALY True H1975_Epitope_Rep3 1160.64412479272 1160.64302993586 45.522 2 0.19064443607129686 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A'] 53917 9001 KYIHSANVL True PC9_epitope_Rep1 1043.57637958607 1043.5752899358602 39.47 2 0.19064070139987643 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 131955 18717 VYFVAPAKF True PC9_epitope_Rep2 1040.5695033004797 1040.56840993586 77.369 2 0.19063968913262094 0.0006801564359802754 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 3782 8166 AGVEGSLIVEK True H1975_Epitope_Rep3 1100.607739284 1100.60664993586 36.391 2 0.19063941697654777 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 93890 19231 RVIDDSLVVGV True PC9_epitope_Rep3 1170.66083748602 1170.6597499358602 79.192 2 0.19063449333911006 0.0006801564359802754 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 123292 14492 VHSEQVFAL True PC9_epitope_Rep4 1028.5290950404797 1028.5279899358602 63.655 2 0.190634307477083 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 108299 5854 TEDDGRPIYA True H1975_Epitope_Rep2 1135.51456717515 1135.51346993586 27.506 2 0.19062914214783402 0.0006801564359802754 0.9438714419765777 ['ENSG00000169189|ENST00000361439|NSMCE1', 'ENST00000569236.5_1_16:27236480-27252833:-|nuORF', 'ENST00000565070.5_1_16:27237776-27268891:-|nuORF'] 54246 21708 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 88.544 2 0.19062606087951514 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 57946 11890 LEQNIQLPAA True H1975_Epitope_Rep2 1095.59242357303 1095.59187496793 50.816 1 0.1906225563747362 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 102992 18329 SQISDTSVVL True PC9_epitope_Rep3 1047.5448046742702 1047.54370993586 75.711 2 0.1906146762340255 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 35635 9554 GTLSSWNLK True NCI_RA007_Epitope_Rep5 1004.52909504048 1004.52798993586 43.387 2 0.19061442354846708 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 53644 16741 KWNPTAGVAF True PC9_epitope_Rep4 1089.56072952193 1089.5596299358601 72.361 2 0.1906095819193933 0.0006801564359802754 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 11581 15776 DGTGVVEFVR True PC9_epitope_Rep3 1077.5454733806098 1077.54436993586 65.84 2 0.19060507284330067 0.0006801564359802754 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 9087 8229 AVLDFVKQK True NCI_RA007_Epitope_Rep4 1046.61243074162 1046.61132993586 38.444 2 0.19060362895098493 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 75414 15959 NQFPGFKEV True PC9_epitope_Rep3 1064.52909504048 1064.5279899358602 66.532 2 0.19059581846919996 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 14655 13344 DVNAAIATIK True PC9_epitope_Rep2 1014.57095985246 1014.56986993586 56.601 2 0.19059564818928135 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 70048 16259 LYGRNFNYL True PC9_epitope_Rep4 1158.5821932425 1158.58108993586 70.492 2 0.19059446422290874 0.0006801564359802754 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 136551 14780 YHSEVPVSL True PC9_epitope_Rep3 1029.51311062317 1029.51257496793 61.987 1 0.19059424856940943 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 31563 7363 GEFSEAIKA True NCI_RA007_Epitope_Rep3 950.4709114580198 950.46980993586 36.087 2 0.19058591262691735 0.0006801564359802754 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 38740 7905 HHTTQQTFL True PC9_epitope_Rep3 1111.54105670651 1111.53994993586 35.388 2 0.19057899308529003 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 54113 10011 KYMEDYHQF True PC9_epitope_Rep2 1259.52810906431 1259.5264649037902 43.835 3 0.19057038755114616 0.0006801564359802754 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 5327 15507 ALSKEGIVAL True PC9_epitope_Rep3 999.5964463243098 999.59534993586 64.799 2 0.19055833704605896 0.0006801564359802754 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 133056 15562 VYVVGTAHF True PC9_epitope_Rep5 991.5127167003499 991.51160993586 64.869 2 0.19055484912199866 0.0006801564359802754 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 9548 16736 AYAIIKEEL True PC9_epitope_Rep5 1048.580461907 1048.57936993586 69.382 2 0.1905531951287492 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 87538 19918 QTIQDIVTV True PC9_epitope_Rep2 1015.5549754351499 1015.55386993586 82.01 2 0.19054715342655826 0.0006801564359802754 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF'] 69353 10860 LVQAFQFTDK True H1975_Epitope_Rep3 1195.62372370131 1195.62262993586 46.855 2 0.19054143653871272 0.0006801564359802754 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 113936 19210 TRIWQDVQL True PC9_epitope_Rep2 1157.6193070272097 1157.61820993586 79.264 2 0.19053279933768022 0.0006801564359802754 0.9438714419765777 ['ENSG00000004766|ENST00000305866|VPS50', 'VPS50|p.S583Vfs*7|1|0.23|ENSG00000004766|chr7:93308938-93308938|A/-|frameshift_variant', 'VPS50|p.K778Nfs*7|1|0.13|ENSG00000004766|chr7:93349900-93349900|G/-|frameshift_variant', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 93857 18405 RVFSDIIYTV True PC9_epitope_Rep6 1211.65502382959 1211.65392993586 83.44 2 0.1905291796305831 0.0006801564359802754 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 137158 21278 YLDPSVLSGV True PC9_epitope_Rep3 1048.54407639828 1048.5429699358601 87.141 2 0.1905282976886445 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 40134 11324 HRDSGILGL True PC9_epitope_Rep4 966.5246783663799 966.52358993586 51.338 2 0.19052550012568018 0.0006801564359802754 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 61955 23548 LLLPDYYLVTV True PC9_epitope_Rep2 1307.73769082439 1307.7365899358601 96.052 2 0.19052276796229697 0.0006801564359802754 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 44975 9890 IQHSEFEEV True PC9_epitope_Rep2 1116.50875351872 1116.5076499358602 43.375 2 0.19051924233630152 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1', 'ENSG00000108175|ENST00000334512|ZMIZ1'] 106869 16067 SYIEHIFEI True NCI_RA007_Epitope_Rep5 1149.57062549929 1149.57007496793 68.532 1 0.19050033933803243 0.0006801564359802754 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 10878 4564 DAPQDFHPDR True H1975_Epitope_Rep3 1196.52104953792 1196.51941490379 22.675 3 0.19049510971110079 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'FLNA|p.R664L|1|0.13|ENSG00000196924|chrX:154364557-154364557|C/A|missense_variant'] 89264 4575 RELEDATETA True H1975_Epitope_Rep3 1133.52004647841 1133.51894993586 22.719 2 0.19049418039904803 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 34763 10872 GQSELASRLTL True NCI_RA007_Epitope_Rep4 1173.6353510141698 1173.63424993586 48.668 2 0.19049185149189604 0.0006801564359802754 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 63748 13554 LPRPQGITV True PC9_epitope_Rep1 979.5814649665099 979.58036993586 56.99 2 0.19049098998794659 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 112321 19145 TMIKGLYGI True PC9_epitope_Rep5 994.5521389841799 994.55104993586 78.676 2 0.1904907840181124 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 75891 10473 NRDQYSHLL True PC9_epitope_Rep3 1144.56252042708 1144.56088490379 45.222 3 0.19048887683165558 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 22974 17953 EVIKELAQI True PC9_epitope_Rep1 1041.6070110080097 1041.60647496793 73.847 1 0.19047741861725534 0.0006801564359802754 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 54234 21612 KYPENFFLL True PC9_epitope_Rep2 1169.61209638845 1169.61098993586 88.605 2 0.1904770755383219 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 88424 22521 QYSPLLAAF True PC9_epitope_Rep1 1008.5280324113198 1008.52692993586 91.429 2 0.19046882893885964 0.0006801564359802754 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 37607 8358 GYSFTTTAER True PC9_epitope_Rep6 1131.51965255559 1131.5185499358602 41.803 2 0.19046827437076158 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 84055 8806 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 38.838 2 0.19046447870066094 0.0006801564359802754 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 133051 10247 VYVVGTAHF True NCI_RA007_Epitope_Rep5 991.5127167003499 991.51160993586 46.046 2 0.19046141487863788 0.0006801564359802754 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 27984 10169 FQTEVGKQL True PC9_epitope_Rep2 1048.5553097883198 1048.5542099358602 44.452 2 0.19045171833529317 0.0006801564359802754 0.9438714419765777 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 14643 9293 DVNAAIATIK True H1975_Epitope_Rep3 1014.57095985246 1014.56986993586 40.74 2 0.1904438097043152 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 107277 20341 SYQKVIELF True PC9_epitope_Rep3 1125.6070110080097 1125.6059099358602 83.49 2 0.19043645190159658 0.0006801564359802754 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 90194 16776 RHIEIFTDL True PC9_epitope_Rep2 1142.6084079903399 1142.60730993586 69.776 2 0.1904360563986923 0.0006801564359802754 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 11582 14549 DGTGVVEFVR True PC9_epitope_Rep4 1077.5454733806098 1077.54436993586 63.876 2 0.19042388250304984 0.0006801564359802754 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 9885 22814 AYNDNWFITF True PC9_epitope_Rep4 1289.57168812845 1289.5705899358602 95.975 2 0.19041907500858835 0.0006801564359802754 0.9438714419765777 ['ENSG00000107929|ENST00000316157|LARP4B', 'LARP4B|p.S572Lfs*24|1|0.11|ENSG00000107929|chr10:815015-815052|GGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCT/-|frameshift_variant'] 102732 20982 SQDYPTLAF True PC9_epitope_Rep2 1040.48147614172 1040.4803699358602 86.158 2 0.19041194848811618 0.0006801564359802754 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 37229 18869 GVVDPRAISVL True PC9_epitope_Rep4 1124.65535818276 1124.6542699358602 80.665 2 0.19041193499951 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 41116 16411 HYMSINDSF True PC9_epitope_Rep5 1112.45969515132 1112.4585899358601 68.123 2 0.190411853828236 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 104069 8062 SRTSIQSEL True PC9_epitope_Rep2 1019.52473793603 1019.52364993586 36.369 2 0.190408043382191 0.0006801564359802754 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 8487 8953 ATVAVPLVGK True NCI_RA007_Epitope_Rep5 953.5909670210499 953.58986993586 41.097 2 0.19039340886777453 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 20924 7746 EQVANSAFVER True PC9_epitope_Rep6 1248.6098645423197 1248.6087699358602 39.154 2 0.19038785821729376 0.0006801564359802754 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 17463 19271 EHGNFLITV True PC9_epitope_Rep3 1028.52909504048 1028.5279899358602 79.347 2 0.1903802476376597 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 76795 5764 NVDPVQHTY True H1975_Epitope_Rep3 1071.4985231881901 1071.4979749679298 27.197 1 0.19037911573907687 0.0006801564359802754 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 94421 16508 RYFENPQVI True PC9_epitope_Rep3 1164.5927579262 1164.5916699358602 68.634 2 0.1903785758820262 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 131096 15721 VVMQEGLAHI True PC9_epitope_Rep1 1095.5746653339097 1095.5735699358602 65.293 2 0.19037437510053234 0.0006801564359802754 0.9438714419765777 ['ENSG00000152684|ENST00000274311|PELO'] 34486 14149 GQDGQLKGFAV True PC9_epitope_Rep5 1118.5720224816198 1118.57092993586 59.435 2 0.19037207193837988 0.0006801564359802754 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 112705 2644 TPGPGAQSALR True NCI_RA007_Epitope_Rep5 1053.55670677065 1053.55560993586 14.857 2 0.1903711838651435 0.0006801564359802754 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14'] 41209 4592 IADGYEQAAR True H1975_Epitope_Rep3 1092.5199869087598 1092.5188899358602 22.784 2 0.19036862532247412 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 61323 7606 LLEDKHFQSY True H1975_Epitope_Rep3 1278.6244519773 1278.6228149037902 34.238 3 0.19035573712274126 0.0006801564359802754 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 96766 8504 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48036993586 37.665 2 0.1903452842135824 0.0006801564359802754 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 39979 11182 HQQSIPAVL True PC9_epitope_Rep6 991.5450794577898 991.5439899358599 53.977 2 0.1903403935744586 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 105542 7444 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4494699358602 33.578 2 0.1903381332065116 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 77333 14634 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.6075749679298 61.29 1 0.1903363576624046 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 138585 17578 YRPPELLL True PC9_epitope_Rep6 999.5753169569099 999.57420993586 80.253 2 0.19032459379596756 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 47886 8443 IYTSSVNRL True PC9_epitope_Rep6 1051.56620882519 1051.5651099358602 42.171 2 0.19032353879357952 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 2172 4744 AEM[Oxidation]PQNYRP True H1975_Epitope_Rep2 1120.4971436696399 1120.4960499358601 23.339 2 0.1903157180461157 0.0006801564359802754 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 32319 14119 GFVTFDDHD True PC9_epitope_Rep4 1051.42468954159 1051.42358993586 62.214 2 0.19031540924240598 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 49383 18384 KIIGAVDQIQL True PC9_epitope_Rep4 1196.71287305888 1196.71176993586 78.78 2 0.19030081237872337 0.0006801564359802754 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 25241 6028 FEDDYTHSA True H1975_Epitope_Rep2 1083.41451878071 1083.4134299358602 28.165 2 0.19029612463074888 0.0006801564359802754 0.9438714419765777 ['ENSG00000162664|ENST00000340281|ZNF326', 'nc|ENSG00000162664|Q5BKZ1-2|ZNF326'] 48934 9266 KEYDGVVVV True H1975_Epitope_Rep2 1006.5335117145797 1006.53240993586 40.597 2 0.19026686887372776 0.0006801564359802754 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 76502 8038 NTDHQTQLLY True H1975_Epitope_Rep3 1231.5833154413099 1231.58277496793 35.892 1 0.1902601682677835 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 137671 18033 YMDDYIFTY True H1975_Epitope_Rep2 1229.49507760053 1229.49398993586 74.706 2 0.1902497034671264 0.0006801564359802754 0.9438714419765777 ['ENSG00000157483|ENST00000288235|MYO1E'] 11827 16814 DHMRFISEL True PC9_epitope_Rep2 1146.54917886206 1146.54754490379 69.924 3 0.1902467024928343 0.0006801564359802754 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 40151 7721 HRDYETATL True PC9_epitope_Rep3 1104.51998690876 1104.5188899358602 34.694 2 0.19023425256315446 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 113498 6983 TQSPSVKSL True PC9_epitope_Rep3 945.51311062317 945.51200993586 31.871 2 0.19023274696101264 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A'] 8173 8820 ATGDMSGLLK True NCI_RA007_Epitope_Rep4 991.5008316873099 991.49972993586 40.738 2 0.1902317894465028 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 37957 6019 HEFDEQVAA True NCI_RA007_Epitope_Rep3 1044.4512386426 1044.45014993586 30.655 2 0.1902289150943562 0.0006801564359802754 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF', 'HERC2|p.R4650W|2|0.28|ENSG00000128731|chr15:28113644-28113644|G/A|missense_variant'] 18281 9250 EITALAPSTM[Oxidation]K True PC9_epitope_Rep1 1176.6060254122801 1176.6049299358601 40.432 2 0.19021800661153504 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 75391 5295 NQELQEINR True H1975_Epitope_Rep3 1142.5679997303398 1142.5669099358602 25.446 2 0.19021431980555026 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 123505 10389 VIHDNFGIVEG True H1975_Epitope_Rep1 1198.59823722946 1198.5971499358602 44.91 2 0.19021285827876327 0.0006801564359802754 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 88935 6463 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 29.832 2 0.1902053515831598 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 24055 6743 EYQELM[Oxidation]SVK True NCI_RA007_Epitope_Rep1 1141.5325261188498 1141.5314299358602 30.238 2 0.19019202248935083 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 83322 14017 QALLDLHAL True NCI_RA007_Epitope_Rep5 992.5654805492001 992.56438993586 60.608 2 0.19018534449028207 0.0006801564359802754 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 11893 5593 DHQQNSPTL True PC9_epitope_Rep1 1038.47303671634 1038.47192993586 26.341 2 0.1901809013473965 0.0006801564359802754 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1'] 69867 10940 LYAPYSTHF True NCI_RA007_Epitope_Rep4 1097.51819600361 1097.5170899358602 48.944 2 0.1901694812183655 0.0006801564359802754 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 77488 13538 NYPQSVPRL True PC9_epitope_Rep1 1072.56654317836 1072.5654499358602 56.93 2 0.1901636534445076 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 1765 10838 AEHGIFLPP True H1975_Epitope_Rep2 979.51271670035 979.51160993586 46.717 2 0.1901575942070681 0.0006801564359802754 0.9438714419765777 ['ENSG00000159079|ENST00000290155|CFAP298'] 10043 9613 AYVEKVERL True PC9_epitope_Rep3 1105.6131590176099 1105.61206993586 41.927 2 0.19014935485260284 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 85830 14477 QMISRIEYV True PC9_epitope_Rep4 1137.58523001761 1137.5841299358601 63.596 2 0.19014687120028387 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 15201 8876 EAFNM[Oxidation]IDQNR True PC9_epitope_Rep5 1252.5506357944798 1252.5495299358602 39.085 2 0.1901380562124755 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 92340 9189 RQPDSGISSI True PC9_epitope_Rep1 1058.5356369729 1058.53452993586 40.195 2 0.19013782611937027 0.0006801564359802754 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 23708 17994 EYIKFLRSI True PC9_epitope_Rep2 1167.6651945904698 1167.66355490379 74.517 3 0.19013763609770473 0.0006801564359802754 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 71141 19591 METVWTILP True H1975_Epitope_Rep3 1088.55761828744 1088.55707496793 82.083 1 0.1901252111023997 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 116848 9986 TYM[Oxidation]KDLYQL True NCI_RA007_Epitope_Rep5 1189.5689116275698 1189.5678099358602 45.053 2 0.19010953269621653 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 127453 11481 VQSNRILGV True PC9_epitope_Rep1 984.5716285587998 984.57052993586 49.041 2 0.19010670133419394 0.0006801564359802754 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 4818 6592 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep1 1219.5754535599897 1219.57434993586 30.162 2 0.19010215514130274 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 27651 19898 FQDDNNLYL True PC9_epitope_Rep2 1140.50875351872 1140.5076499358602 81.933 2 0.1900979899464843 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 135604 7334 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep1 1078.5004977145798 1078.49940993586 33.22 2 0.19009251550056513 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 89142 13859 REGDLLFTVA True NCI_RA007_Epitope_Rep1 1119.5924235730301 1119.5913299358601 57.927 2 0.19008918797555346 0.0006801564359802754 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 24375 7768 FAEHNDLQY True H1975_Epitope_Rep2 1135.4934378077498 1135.4923499358601 34.827 2 0.190088516972266 0.0006801564359802754 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 100134 21711 SLLDIIEKV True PC9_epitope_Rep4 1028.61176203528 1028.6106699358602 91.71 2 0.1900878913937075 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 61217 18592 LLDPNVKSIFV True PC9_epitope_Rep6 1243.71762408615 1243.71652993586 84.157 2 0.1900875488556126 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3', 'ENSG00000117419|ENST00000372257|ERI3'] 8766 7682 AVEEYVYEM[Oxidation]R True H1975_Epitope_Rep1 1303.5754535599897 1303.57434993586 34.515 2 0.19008406715290227 0.0006801564359802754 0.9438714419765777 ['ENSG00000170606|ENST00000304858|HSPA4'] 73176 5092 NEEEIRANVA True H1975_Epitope_Rep1 1143.55201531303 1143.55090993586 24.657 2 0.19008280888062093 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 44138 19154 ILPKELQTW True PC9_epitope_Rep1 1126.6386454894598 1126.63754993586 78.47 2 0.19008052453698132 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 106001 19983 SVLKSLVEI True PC9_epitope_Rep5 986.6011973515799 986.60010993586 81.918 2 0.19007833271092006 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 123095 18999 VHAPPMQLGF True PC9_epitope_Rep5 1095.5535359665098 1095.5524299358601 78.107 2 0.1900648489711009 0.0006801564359802754 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 4579 9202 ALAAGGYDVEK True PC9_epitope_Rep5 1092.54513902744 1092.5440499358601 40.342 2 0.1900645651907029 0.0006801564359802754 0.9438714419765777 ['ENSG00000184357|ENST00000331442|H1-5'] 108435 5611 TEEKFIVKA True H1975_Epitope_Rep1 1063.5913609438699 1063.59026993586 26.649 2 0.1900617601166875 0.0006801564359802754 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 31827 5115 GENPIYKSA True NCI_RA007_Epitope_Rep4 977.4818104948899 977.48070993586 26.188 2 0.19006164773874837 0.0006801564359802754 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1'] 31832 16402 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53274993586 68.31 2 0.1900593378242129 0.0006801564359802754 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 38370 19881 HGFAGYFETV True PC9_epitope_Rep3 1126.5083595959 1126.5072699358602 81.711 2 0.19005074521056772 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5', 'ENST00000557758.1_1_14:23391634-23392032:-|nuORF'] 22265 5305 ETDRGMSAEY True H1975_Epitope_Rep3 1157.46590273057 1157.46480993586 25.485 2 0.19004987135667356 0.0006801564359802754 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 135612 8970 YEEMGIKPP True H1975_Epitope_Rep3 1062.5055827145798 1062.5044899358602 39.498 2 0.190041691633655 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 53281 19606 KTIQDLVSL True PC9_epitope_Rep1 1015.5913609438699 1015.59026993586 80.242 2 0.19003870900551964 0.0006801564359802754 0.9438714419765777 ['ENSG00000025796|ENST00000369002|SEC63'] 96046 9287 SEAPKSWMV True H1975_Epitope_Rep2 1033.49026700361 1033.4891699358602 40.68 2 0.1900355683514482 0.0006801564359802754 0.9438714419765777 ['ENSG00000154760|ENST00000285013|SLFN13'] 21699 7844 ERYKEVAEL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 35.542 2 0.1900314793634588 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 120891 7659 VGDVTGAQAY True H1975_Epitope_Rep3 979.4610750503098 979.45996993586 34.442 2 0.1900295179694559 0.0006801564359802754 0.9438714419765777 ['ENSG00000185201|ENST00000616316|IFITM2', 'ENST00000527146.1_2_11:308871-309162:+|nuORF', 'ENSG00000185885|ENST00000408968|IFITM1', 'ENSG00000142089|ENST00000399808|IFITM3'] 39950 9357 HQQSIPAVL True NCI_RA007_Epitope_Rep1 991.5450794577898 991.5439899358599 40.389 2 0.1900251057275432 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 29668 11700 FVNDIFER True NCI_RA007_Epitope_Rep1 1038.5134449763398 1038.5123499358601 49.484 2 0.19002268917630505 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 57192 7387 LEESSPKLP True H1975_Epitope_Rep3 998.5284263341399 998.5273299358599 33.392 2 0.19002078679413473 0.0006801564359802754 0.9438714419765777 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000544007.5_1_14:31028384-31077115:+|nuORF'] 88350 20088 QYMELFNKI True PC9_epitope_Rep2 1184.5899810448798 1184.5888899358602 82.676 2 0.19001403344728812 0.0006801564359802754 0.9438714419765777 ['ENSG00000124641|ENST00000265350|MED20'] 23886 11436 EYMKHTRLF True PC9_epitope_Rep1 1223.6121134717898 1223.61046490379 48.866 3 0.190003575487786 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 4849 22171 ALFPHLLQPVL True PC9_epitope_Rep5 1246.74377926434 1246.7426899358602 90.319 2 0.1900027440521771 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 23921 19986 EYNNIFHTF True PC9_epitope_Rep5 1183.52982331647 1183.5287299358602 81.93 2 0.19000121968516992 0.0006801564359802754 0.9438714419765777 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 88874 7323 REAEIYQTV True H1975_Epitope_Rep3 1107.5560380643099 1107.5549499358601 33.142 2 0.1899940719109442 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant'] 8305 15940 ATLKELTSL True PC9_epitope_Rep4 974.56481184286 974.56370993586 69.239 2 0.18999278477402032 0.0006801564359802754 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18', 'ENST00000434334.1_1_2:182559249-182559624:+|nuORF'] 64555 16853 LRDGQILEL True PC9_epitope_Rep4 1055.59750895347 1055.59640993586 72.806 2 0.18999272388123226 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 67531 8628 LTEMQTEQY True H1975_Epitope_Rep2 1141.49614022969 1141.4950499358602 38.144 2 0.18998444446240206 0.0006801564359802754 0.9438714419765777 ['ENSG00000135537|ENST00000368977|AFG1L', 'ENST00000486863.1_1_6:108843484-108843625:+|nuORF'] 27676 15231 FQDENHLYL True PC9_epitope_Rep4 1177.54038800017 1177.53928993586 66.515 2 0.18998315213623176 0.0006801564359802754 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 21223 18053 ERFNVPVSL True PC9_epitope_Rep4 1059.5712942056298 1059.57018993586 77.504 2 0.18997730052043194 0.0006801564359802754 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 2521 14053 AEQTGRWWIV True H1975_Epitope_Rep3 1244.6302060640799 1244.62910993586 59.378 2 0.18997011078692952 0.0006801564359802754 0.9438714419765777 ['ENSG00000146909|ENST00000275820|NOM1', 'ENST00000475176.1_1_7:156754853-156755974:+|nuORF', 'ENST00000472491.1_1_7:156754865-156756721:+|nuORF'] 3198 6661 AGELTEDEVER True PC9_epitope_Rep6 1246.5677249468197 1246.5666299358602 34.362 2 0.18995872407681488 0.0006801564359802754 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 40350 6036 HRTDSEIAL True PC9_epitope_Rep4 1040.5250722892 1040.5239699358601 30.202 2 0.18995550253901328 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 89502 7275 REQQLAEIEA True H1975_Epitope_Rep2 1185.5989655054498 1185.5978699358602 32.919 2 0.18995532925100425 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2'] 53987 8454 KYLDNPNAL True NCI_RA007_Epitope_Rep1 1046.53965972418 1046.53856993586 36.883 2 0.18995123486250276 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 87688 9073 QVDNSLITKY True H1975_Epitope_Rep3 1179.6135529404298 1179.61244993586 39.885 2 0.18993981566487383 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'PRR14L|p.P1996Qfs*42|1|0.37|ENSG00000183530|chr22:31703563-31703563|G/-|frameshift_variant', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 83095 21868 PYNDYFEYF True PC9_epitope_Rep4 1256.50260550912 1256.5015099358602 92.324 2 0.18993766059423256 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 136471 7619 YHHEAGVTAL True PC9_epitope_Rep5 1096.53015766964 1096.5290699358602 34.254 2 0.1899313346111063 0.0006801564359802754 0.9438714419765777 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 114331 15529 TSDDPWLTAY True H1975_Epitope_Rep2 1167.5084191655499 1167.5078749679299 64.887 1 0.18993049455985794 0.0006801564359802754 0.9438714419765777 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 53072 8641 KSDGSFIGY True H1975_Epitope_Rep3 972.4552613938799 972.45416993586 38.233 2 0.18992537577877303 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2', 'ENST00000537834.5_1_19:40745726-40771198:-|nuORF'] 120422 21634 VFTEVANLF True PC9_epitope_Rep4 1038.53859709502 1038.53750993586 91.407 2 0.18991787604631524 0.0006801564359802754 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 47198 18000 IYAPKLQEF True PC9_epitope_Rep3 1107.59644632431 1107.5953499358602 74.44 2 0.18990591394382908 0.0006801564359802754 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 40672 4853 HTLNQIDSVK True NCI_RA007_Epitope_Rep1 1153.6091362663299 1153.60802993586 22.958 2 0.18990202688642518 0.0006801564359802754 0.9438714419765777 ['CON__P12763'] 117406 7429 VADKVHLMY True H1975_Epitope_Rep1 1074.55320161334 1074.55210993586 33.579 2 0.18990048411141527 0.0006801564359802754 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 16370 14928 EELEEVIKDI True H1975_Epitope_Rep1 1215.6234489177898 1215.62234993586 62.66 2 0.18989688695572518 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143106|P28066-2|PSMA5', 'ENSG00000143106|ENST00000271308|PSMA5'] 71310 10533 MHEENVYTV True PC9_epitope_Rep5 1120.4859098991599 1120.48480993586 45.503 2 0.18988649505354804 0.0006801564359802754 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000565298.5_1_16:1576517-1634259:-|nuORF'] 40381 16658 HRTEMDWVL True PC9_epitope_Rep2 1185.5600778989299 1185.55843490379 69.319 3 0.18988559198455532 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 75957 20772 NRGDFFMTL True PC9_epitope_Rep5 1099.51206507735 1099.5109699358602 84.95 2 0.18988509484781693 0.0006801564359802754 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000380393.7_1_20:2844875-2903853:+|nuORF'] 102956 23076 SQIPFPLSL True PC9_epitope_Rep1 1000.5593325396 1000.55877496793 93.563 1 0.18988223249159036 0.0006801564359802754 0.9438714419765777 ['ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 124299 17631 VLDINSIDNLY True H1975_Epitope_Rep2 1277.65033237197 1277.6492299358601 73.134 2 0.1898817510087691 0.0006801564359802754 0.9438714419765777 ['ENST00000486882.5_1_1:79094613-79107491:+|nuORF', 'ENSG00000137959|ENST00000370751|IFI44L'] 113561 18994 TQYPFDFRGA True PC9_epitope_Rep1 1200.5563724174797 1200.55526993586 77.846 2 0.18987029120675597 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000054179|Q9Y5L3-3|ENTPD2', 'nc|ENSG00000054179|Q9Y5L3-2|ENTPD2', 'ENSG00000054179|ENST00000355097|ENTPD2'] 52666 20006 KQFEPNDFYL True PC9_epitope_Rep3 1299.6135529404298 1299.61244993586 82.199 2 0.1898687804032296 0.0006801564359802754 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 26554 9396 FIVNTNVPR True NCI_RA007_Epitope_Rep1 1058.58727862294 1058.5861899358601 40.54 2 0.18986861386047607 0.0006801564359802754 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 86515 8404 QRAITGASL True PC9_epitope_Rep5 915.5137793295099 915.51268993586 37.267 2 0.18986518247377088 0.0006801564359802754 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 55971 10035 LDIDSPPITAR True NCI_RA007_Epitope_Rep4 1196.6401020414398 1196.63900993586 45.442 2 0.18986426171887885 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 117175 21103 TYTDRVFFL True PC9_epitope_Rep1 1160.5866099165999 1160.58550993586 86.0 2 0.18984949780896426 0.0006801564359802754 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 132736 20614 VYSIVPQSW True PC9_epitope_Rep4 1077.54949613189 1077.54897496793 87.445 1 0.1898455783487522 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 31411 19201 GEDFLSWNDL True H1975_Epitope_Rep1 1194.51931820242 1194.51822993586 80.012 2 0.1898440711364007 0.0006801564359802754 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.R772Pfs*13|1|0.15|ENSG00000183856|chr1:156544452-156544462|CCTATAACCCC/-|frameshift_variant'] 91359 5748 RMQKEITAL True NCI_RA007_Epitope_Rep1 1088.60121443492 1088.60010993586 26.415 2 0.18983676391642154 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 101110 23275 SLVELLNQI True PC9_epitope_Rep3 1027.5913609438699 1027.59026993586 94.804 2 0.18982776029212292 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 41224 17037 IADSNYNWFY True H1975_Epitope_Rep1 1291.55095268387 1291.54984993586 70.957 2 0.18982188339901035 0.0006801564359802754 0.9438714419765777 ['ENSG00000171451|ENST00000310045|DSEL', 'DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 46234 8946 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 39.366 2 0.1898189061660336 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 96673 6295 SENWRVDSA True H1975_Epitope_Rep2 1062.47303671634 1062.47192993586 29.151 2 0.18980885652689194 0.0006801564359802754 0.9438714419765777 ['ENST00000480874.5_1_2:264964-275202:+|nuORF', 'nc|ENSG00000143727|P24666-4|ACP1', 'ENSG00000143727|ENST00000272065|ACP1', 'ENST00000484464.5_1_2:265208-277301:+|nuORF', 'ENST00000405364.2_1_2:269313-272255:+|nuORF'] 21330 16206 ERLGQFM[Oxidation]TL True PC9_epitope_Rep1 1109.55393026977 1109.55282993586 67.153 2 0.18980246603985396 0.0006801564359802754 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 67223 13790 LTDLPGQELY True H1975_Epitope_Rep2 1147.57610480255 1147.5750099358602 58.188 2 0.1898012203091073 0.0006801564359802754 0.9438714419765777 ['ENSG00000083817|ENST00000196489|ZNF416'] 138258 12311 YQVDSRTYL True PC9_epitope_Rep4 1143.5560380643099 1143.5549499358601 55.166 2 0.1897959029485601 0.0006801564359802754 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000513152.1_1_5:40764586-40764871:-|nuORF'] 100149 19400 SLLDPVPEV True PC9_epitope_Rep6 967.52261267771 967.52150993586 87.277 2 0.18979358386927384 0.0006801564359802754 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 29040 12909 FTLSHITQL True H1975_Epitope_Rep2 1058.5760452329 1058.57494993586 54.768 2 0.1897632209923031 0.0006801564359802754 0.9438714419765777 ['ENSG00000148484|ENST00000345264|RSU1'] 76467 5634 NTDEM[Oxidation]VELR True NCI_RA007_Epitope_Rep2 1121.5022886197298 1121.50118993586 26.528 2 0.18976123559876878 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000483135.1_1_9:86591819-86593167:-|nuORF'] 116873 20297 TYNPEIYVI True PC9_epitope_Rep4 1110.55972646242 1110.5586299358602 86.215 2 0.18975783388430986 0.0006801564359802754 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 29438 16407 FVHDLVLYL True H1975_Epitope_Rep3 1117.6171817688898 1117.6160899358601 68.584 2 0.18975781145612317 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 37228 19808 GVVDPRAISVL True PC9_epitope_Rep3 1124.65535818276 1124.6542699358602 81.425 2 0.18975710294768336 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 106043 14838 SVLQQNPSL True PC9_epitope_Rep5 984.52400966004 984.52290993586 62.076 2 0.18975295261096975 0.0006801564359802754 0.9438714419765777 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 29645 16950 FVLSQAKDEL True PC9_epitope_Rep1 1148.607739284 1148.60664993586 70.022 2 0.18975243455442908 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 114161 8510 TRSTFSTNY True PC9_epitope_Rep1 1075.49343780775 1075.4923499358601 37.571 2 0.18975159392272511 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 44953 9604 IQGALSAY True H1975_Epitope_Rep2 821.42831837005 821.4277649679301 41.917 1 0.18974250983436097 0.0006801564359802754 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 138601 10718 YRQKQVVIL True PC9_epitope_Rep5 1145.6920780446499 1145.6909899358602 46.217 2 0.18974088691638 0.0006801564359802754 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 18795 12080 ELDTPINY True H1975_Epitope_Rep2 963.4549270407099 963.4543749679301 51.548 1 0.18973887702092734 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 41844 12004 IDTIEIITDR True H1975_Epitope_Rep1 1187.63976768827 1187.6386699358602 51.181 2 0.189732910372609 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 12227 6967 DIQEESTFSSR True H1975_Epitope_Rep1 1297.57862398369 1297.5775299358602 31.839 2 0.1897125716962101 0.0006801564359802754 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC'] 1469 14801 AEELRLLLP True H1975_Epitope_Rep3 1052.62299542532 1052.62188993586 62.31 2 0.1896975341339704 0.0006801564359802754 0.9438714419765777 ['ENST00000566833.1_1_15:43477651-43481519:+|nuORF', 'ENST00000564630.5_1_15:43477651-43478217:+|nuORF', 'nc|ENSG00000166946|O95273-2|CCNDBP1', 'ENSG00000166946|ENST00000300213|CCNDBP1'] 8234 14202 ATIIDILTK True NCI_RA007_Epitope_Rep3 986.60119735158 986.60010993586 63.168 2 0.18969363311455537 0.0006801564359802754 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 4678 9153 ALDFIASK True H1975_Epitope_Rep3 863.47526856247 863.47416993586 40.196 2 0.1896922707308357 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 104239 9308 SSDPASQLSY True H1975_Epitope_Rep1 1053.46146897313 1053.4603699358602 40.71 2 0.18969053206300893 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 105714 12240 SVHKGFAFV True PC9_epitope_Rep3 990.5287011176598 990.52760993586 52.112 2 0.18968335620822016 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 101794 11601 SPIENIQRV True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 49.62 2 0.18968214340335304 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 94411 10926 RYFDPANGKF True PC9_epitope_Rep6 1213.5880068989297 1213.5869099358601 52.896 2 0.18967271639506003 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 114222 9982 TRVSQINTL True PC9_epitope_Rep3 1030.5771078620598 1030.5760099358602 43.351 2 0.18967111423149166 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 97397 5599 SGEGEVSGLM[Oxidation]R True NCI_RA007_Epitope_Rep1 1136.5131876566 1136.51208993586 25.844 2 0.18966990310118262 0.0006801564359802754 0.9438714419765777 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 113549 19195 TQVTALIKL True PC9_epitope_Rep5 985.61718176889 985.61608993586 78.873 2 0.18966271176568575 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 23790 19086 EYLADLYHF True PC9_epitope_Rep6 1169.5393253710101 1169.53822993586 86.058 2 0.1896603933292761 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 106004 9246 SVLLFVTKK True NCI_RA007_Epitope_Rep4 1033.65356727761 1033.6524699358602 42.418 2 0.18965852776971004 0.0006801564359802754 0.9438714419765777 ['ENSG00000198231|ENST00000389924|DDX42', 'nc|ENSG00000198231|Q86XP3-2|DDX42', 'ENST00000578593.1_1_17:61889231-61895755:+|nuORF'] 77113 17829 NYAQVLDKF True PC9_epitope_Rep4 1096.5553097883198 1096.5542099358602 76.613 2 0.18964894186406964 0.0006801564359802754 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 37879 6742 HEAEYYVAA True H1975_Epitope_Rep3 1051.46107505031 1051.45996993586 30.888 2 0.1896450432611903 0.0006801564359802754 0.9438714419765777 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD', 'ENST00000482824.1_1_3:15676934-15683645:+|nuORF'] 24199 15565 EYVEKFYRI True PC9_epitope_Rep1 1245.6393737654498 1245.63772490379 64.694 3 0.18963944908464336 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 105012 3278 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 18.298 3 0.18963810470693046 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 92140 8064 RQAPIPAEL True NCI_RA007_Epitope_Rep3 993.5607295219298 993.55962993586 38.806 2 0.1896375170969777 0.0006801564359802754 0.9438714419765777 ['ENSG00000169583|ENST00000494426|CLIC3'] 98155 7753 SIDDLEEK True PC9_epitope_Rep1 947.44475627983 947.44364993586 34.643 2 0.18963183352535307 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 10020 17916 AYTPFHAVL True PC9_epitope_Rep2 1017.5283667644899 1017.52726993586 74.218 2 0.189631265471106 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 30423 13110 GAFVHFHGV True PC9_epitope_Rep5 969.4820852784097 969.48098993586 55.432 2 0.1896288155158637 0.0006801564359802754 0.9438714419765777 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 11650 15129 DHDGNIVEL True PC9_epitope_Rep1 1010.46688870674 1010.46578993586 63.014 2 0.18962257571376245 0.0006801564359802754 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 64558 15905 LRDGQILEL True PC9_epitope_Rep6 1055.59750895347 1055.59640993586 73.46 2 0.18961757149737812 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 103523 11488 SRDDNM[Oxidation]FQI True PC9_epitope_Rep4 1140.48697290876 1140.4858699358601 51.95 2 0.1896128628097208 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 39692 9831 HPTWALKEA True PC9_epitope_Rep1 1051.5450794577898 1051.54398993586 42.676 2 0.18960933873781546 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 47264 21434 IYEPNFIFF True NCI_RA007_Epitope_Rep5 1188.5855472874398 1188.5844499358602 89.508 2 0.18960341765969588 0.0006801564359802754 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 5774 18617 APELLFFAK True PC9_epitope_Rep6 1034.5800679841798 1034.5789699358602 84.253 2 0.18960340536874049 0.0006801564359802754 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 124346 19885 VLDSEGYLLFY True H1975_Epitope_Rep2 1317.6492697428098 1317.64816993586 82.471 2 0.1896020476639779 0.0006801564359802754 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 24458 10117 FAHTNVESL True PC9_epitope_Rep2 1016.4927095317599 1016.49160993586 44.253 2 0.1895979854589119 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 114334 15401 TSDDPWLTAY True H1975_Epitope_Rep3 1167.5084191655499 1167.50732993586 64.651 2 0.18959438217182153 0.0006801564359802754 0.9438714419765777 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 106176 8772 SVPEGPWWRK True NCI_RA007_Epitope_Rep3 1240.63529144452 1240.6336349037902 41.593 3 0.18959164459441524 0.0006801564359802754 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 89855 20687 RFLNDPGHLLW True PC9_epitope_Rep3 1366.7146043943799 1366.7135099358602 84.847 2 0.1895891530288354 0.0006801564359802754 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 65058 15090 LSDLFSDDY True H1975_Epitope_Rep3 1073.45532096353 1073.45477496793 63.44 1 0.18957127135116525 0.0006801564359802754 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 83021 10094 PYKVTQDEL True PC9_epitope_Rep2 1091.54989005471 1091.5487899358602 44.16 2 0.18957115353630147 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 47828 17043 IYSPQFSRL True PC9_epitope_Rep3 1109.5869442697701 1109.58584993586 70.71 2 0.18956981338633397 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000071909|Q8WXR4-6|MYO3B', 'ENST00000409940.6_1_2:171034716-171376051:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-3|MYO3B', 'nc|ENSG00000071909|Q8WXR4-5|MYO3B', 'nc|ENSG00000071909|Q8WXR4-2|MYO3B', 'ENST00000438642.6_1_2:171034716-171400468:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-4|MYO3B', 'ENSG00000071909|ENST00000408978|MYO3B', 'nc|ENSG00000071909|Q8WXR4-7|MYO3B', 'ENST00000602629.1_1_2:171225816-171400468:+|nuORF'] 77376 14450 NYLSHHLTI True PC9_epitope_Rep3 1096.5665431783602 1096.5654499358602 60.687 2 0.18956379426035563 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 18292 7891 EITALAPSTM[Oxidation]K True PC9_epitope_Rep6 1176.6060254122801 1176.6049299358601 39.778 2 0.1895483114984656 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 62129 20001 LLPDLIQKV True PC9_epitope_Rep5 1037.6484818971699 1037.64738993586 81.987 2 0.18954811138236488 0.0006801564359802754 0.9438714419765777 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF'] 113519 11034 TQTAVITRI True PC9_epitope_Rep5 1001.5869442697699 1001.58584993586 47.432 2 0.1895464012904336 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 21972 6437 ESLQQM[Oxidation]AEVTR True NCI_RA007_Epitope_Rep2 1306.6187153542999 1306.6176099358602 29.646 2 0.18954280570624388 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130175|P14314-2|PRKCSH', 'nc|ENSG00000130175|P14314|PRKCSH', 'ENSG00000130175|ENST00000677123|PRKCSH'] 39951 9520 HQQSIPAVL True NCI_RA007_Epitope_Rep2 991.5450794577898 991.5439899358599 41.645 2 0.18953597890341262 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 46196 16730 ITDIQIPLDY True H1975_Epitope_Rep3 1189.6230549949698 1189.6219499358601 69.878 2 0.1895338301569087 0.0006801564359802754 0.9438714419765777 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 75675 16362 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53856993586 68.181 2 0.18952948808200867 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 113232 8185 TQDTQPHYI True PC9_epitope_Rep1 1101.50908787189 1101.50798993586 36.318 2 0.1895243286244748 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 52173 20274 KMDASLGNLFA True PC9_epitope_Rep5 1165.58014463717 1165.5790499358602 83.035 2 0.18951575208861698 0.0006801564359802754 0.9438714419765777 ['ENSG00000196937|ENST00000359943|FAM3C'] 28076 9641 FRDQNPEQL True PC9_epitope_Rep3 1145.5465360097699 1145.54542993586 42.032 2 0.18951416465357623 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 26688 12160 FLDDGHTFNY True H1975_Epitope_Rep2 1227.51965255559 1227.5185499358602 51.858 2 0.1895115380001241 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 6801 5603 AQFKGTQSL True NCI_RA007_Epitope_Rep3 978.51344497634 978.51234993586 29.034 2 0.18951030189167095 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR'] 127046 18334 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 75.309 2 0.18949715755564173 0.0006801564359802754 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 58229 13888 LESTPSPVVF True H1975_Epitope_Rep3 1074.55972646242 1074.5586299358602 58.73 2 0.1894833937061833 0.0006801564359802754 0.9438714419765777 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 35136 6145 GRYAGEESL True PC9_epitope_Rep4 980.4563240230399 980.45522993586 30.655 2 0.18947553224103666 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 75402 15595 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 64.806 2 0.18946804797512376 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 102786 14240 SQESKVLYL True PC9_epitope_Rep1 1065.57062549929 1065.5695299358601 59.599 2 0.18945850318254318 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 74087 11223 NHVASDISL True PC9_epitope_Rep5 954.47705946762 954.47596993586 48.159 2 0.18945751460254753 0.0006801564359802754 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 69716 20896 LWAPRPFNL True PC9_epitope_Rep5 1112.61309944796 1112.6120099358602 85.431 2 0.18945677310522144 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 70538 15273 LYTPVLIRF True NCI_RA007_Epitope_Rep3 1120.66446631448 1120.6633699358601 67.624 2 0.18945506287052907 0.0006801564359802754 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 54219 16840 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 71.524 2 0.18945032804839815 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 29443 16475 FVHDLVLYL True NCI_RA007_Epitope_Rep4 1117.6171817688898 1117.6160899358601 71.418 2 0.1894451282652939 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 98157 7071 SIDDLEEK True PC9_epitope_Rep2 947.44475627983 947.44364993586 32.596 2 0.18944412802099125 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 113798 10719 TRDSNIIRL True PC9_epitope_Rep5 1086.61455599994 1086.6134499358602 46.221 2 0.18944252808085382 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS'] 22145 9205 ESYSVYVYK True NCI_RA007_Epitope_Rep2 1136.5389910178399 1136.53847496793 40.415 1 0.1894416933686176 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 75690 14769 NQTPVTLQV True PC9_epitope_Rep6 998.5396597241801 998.53911496793 68.766 1 0.18943406375784372 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 110731 10667 TKEVNSGFFY True H1975_Epitope_Rep3 1190.5607890915799 1190.5596899358602 46.104 2 0.18942981014689864 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 92466 12717 RQYFQEIGL True NCI_RA007_Epitope_Rep5 1152.5927579262 1152.5916699358602 55.582 2 0.18942451735256952 0.0006801564359802754 0.9438714419765777 ['ENSG00000110328|ENST00000227756|GALNT18'] 132646 12510 VYQHLFTRI True PC9_epitope_Rep4 1175.6451278522297 1175.64349490379 55.938 3 0.1894179774285449 0.0006801564359802754 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 75512 18092 NQITQLESL True PC9_epitope_Rep6 1044.54513902744 1044.5440499358601 82.227 2 0.18941757407597026 0.0006801564359802754 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 57943 11845 LEQNIQLPAA True H1975_Epitope_Rep1 1095.59242357303 1095.59187496793 50.559 1 0.18941681049813772 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 70109 21155 LYIVEPLKF True PC9_epitope_Rep3 1120.6532329244399 1120.65212993586 86.658 2 0.18941483121973576 0.0006801564359802754 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 114806 14195 TTDELEKLLY True H1975_Epitope_Rep2 1223.62853429823 1223.6274299358602 59.752 2 0.18941239543668556 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1'] 6113 9485 APNLQNQQV True PC9_epitope_Rep1 1010.5145076055 1010.51340993586 41.341 2 0.189407863241443 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 88421 7044 QYSDVNNRW True NCI_RA007_Epitope_Rep3 1180.52613491836 1180.5250299358602 34.826 2 0.1894071737741188 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'ENST00000602898.1_1_2:54753540-54753741:+|nuORF'] 70204 20216 LYLPSFFTY True NCI_RA007_Epitope_Rep3 1149.57464825057 1149.57354993586 88.08 2 0.1894006141827559 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 17448 20703 EHGIVVFSL True PC9_epitope_Rep1 999.5389314481899 999.53782993586 84.46 2 0.18939806446678936 0.0006801564359802754 0.9438714419765777 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 8238 14744 ATIIDILTK True NCI_RA007_Epitope_Rep4 986.60119735158 986.60010993586 64.164 2 0.189396892438286 0.0006801564359802754 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 139428 16234 YTELEAIMY True H1975_Epitope_Rep2 1131.5158130451098 1131.51470993586 67.653 2 0.18939602221317328 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 33986 16069 GNFNYVEFTR True PC9_epitope_Rep4 1245.5778361380499 1245.5767299358602 69.743 2 0.18939010804388579 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 132851 22352 VYTPVDSLVF True PC9_epitope_Rep2 1138.5910265906998 1138.58992993586 91.466 2 0.18938346536929748 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'KDM2B|p.I399Mfs*82|1|0.34|ENSG00000089094|chr12:121510014-121510017|GTCT/-|frameshift_variant', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 40143 5248 HRDTTVQTL True PC9_epitope_Rep5 1069.5516213902101 1069.5505299358601 25.204 2 0.18938197506729107 0.0006801564359802754 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 93846 17227 RVFIGNLNTL True PC9_epitope_Rep6 1145.65569253593 1145.65458993586 78.857 2 0.18938040450953808 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 27844 21310 FQLEHIMDL True PC9_epitope_Rep5 1144.5586809166 1144.55758993586 87.023 2 0.18937829134840425 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 109589 8199 THDDSHLVSL True PC9_epitope_Rep6 1122.5305515924601 1122.5289149037899 41.109 3 0.1893742111388086 0.0006801564359802754 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 106476 15183 SVVGQIAKL True PC9_epitope_Rep2 913.5596668927699 913.55856993586 63.66 2 0.18937402727901134 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 72344 19449 M[Oxidation]TDPIRILV True PC9_epitope_Rep3 1072.5950668057599 1072.59396993586 80.036 2 0.18937178264637997 0.0006801564359802754 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78112818-78113115:-|nuORF'] 9551 19600 AYALLLQHL True PC9_epitope_Rep4 1040.60186605792 1040.6007699358602 83.516 2 0.18936986596566288 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6'] 44696 16966 IPNPAQTSVVV True PC9_epitope_Rep4 1123.62372370131 1123.62262993586 73.25 2 0.18936364654833965 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 76778 15455 NVDFDAPLGY True H1975_Epitope_Rep1 1109.5029398622898 1109.5023749679299 64.718 1 0.1893547211418074 0.0006801564359802754 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 136458 6598 YHGNTNPEL True PC9_epitope_Rep1 1043.46722305991 1043.4661299358602 30.182 2 0.18935059279124838 0.0006801564359802754 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 89477 6868 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 31.336 2 0.18934060196371091 0.0006801564359802754 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 94790 11917 RYLQTLTTI True NCI_RA007_Epitope_Rep2 1107.62880908175 1107.6277099358601 50.959 2 0.18933988171719546 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 48939 6347 KEYDVAVQA True H1975_Epitope_Rep3 1021.5080252427298 1021.50692993586 29.405 2 0.1893280594317591 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant'] 40923 4987 HVVFIAQR True NCI_RA007_Epitope_Rep5 968.55558457184 968.55448993586 25.887 2 0.18932326612914332 0.0006801564359802754 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 76548 12779 NTDPSIVMTY True H1975_Epitope_Rep3 1139.51687567427 1139.51637496793 54.371 1 0.18931724302388178 0.0006801564359802754 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 75973 13414 NRHEIAVML True PC9_epitope_Rep1 1081.57024865981 1081.5691499358602 56.458 2 0.18930091200729635 0.0006801564359802754 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10', 'nc|ENSG00000101843|O75832-2|PSMD10'] 21039 10146 ERDAYVQAL True PC9_epitope_Rep6 1063.52982331647 1063.5287299358602 49.647 2 0.18929080576002497 0.0006801564359802754 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 110974 8514 TLDDESLKY True H1975_Epitope_Rep2 1082.5131701928199 1082.5120699358602 37.704 2 0.18927874783228543 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 131750 15413 VYAALQRQLL True PC9_epitope_Rep6 1173.6869926642098 1173.6858899358601 71.443 2 0.18927784860563232 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 71389 9655 MIEPRTLQY True H1975_Epitope_Rep2 1149.58523001761 1149.5841299358601 42.118 2 0.18927274221543186 0.0006801564359802754 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 94964 13736 RYPTSIASL True PC9_epitope_Rep4 1006.5447451046199 1006.54364993586 60.733 2 0.1892572942772298 0.0006801564359802754 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 67505 16125 LTELPDWSY True H1975_Epitope_Rep2 1122.5233409537 1122.5222499358601 67.238 2 0.1892540620705227 0.0006801564359802754 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 113525 9431 TQTAVITRI True PC9_epitope_Rep6 1001.5869442697699 1001.58584993586 46.501 2 0.18925164981306605 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 43040 12032 IGGIGTVPVGR True PC9_epitope_Rep2 1024.6029286870798 1024.60182993586 51.598 2 0.1892474059993466 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 31838 16393 GENPLQVLV True H1975_Epitope_Rep3 967.5338460677499 967.53274993586 68.529 2 0.1892468403546592 0.0006801564359802754 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 51977 15346 KLADDVDLEQV True PC9_epitope_Rep4 1243.62959692739 1243.6284899358602 66.961 2 0.18923925086597132 0.0006801564359802754 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF', 'ENST00000480327.1_1_9:35060776-35061606:-|nuORF'] 24336 10373 FADLSEAANR True PC9_epitope_Rep5 1092.5199869087598 1092.5188899358602 44.884 2 0.18923694512919131 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 46603 4621 ITSPVVTQK True NCI_RA007_Epitope_Rep5 971.56514619603 971.56404993586 24.45 2 0.1892332879175518 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR', 'ENST00000504466.1_1_5:74645886-74647190:+|nuORF'] 25236 15326 FEDDAIQLV True H1975_Epitope_Rep3 1048.50769088956 1048.5065899358601 64.361 2 0.1892328280860712 0.0006801564359802754 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 27007 21474 FLLGPRLVLA True PC9_epitope_Rep3 1097.6961007959299 1097.69500993586 87.891 2 0.18922684516840552 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 10937 3888 DAVTYTEHAK True NCI_RA007_Epitope_Rep2 1133.53530261973 1133.5342099358602 19.759 2 0.1892024464378836 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 114166 8526 TRSTFSTNY True PC9_epitope_Rep3 1075.49343780775 1075.4923499358601 37.751 2 0.18919741280166522 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 107397 13254 SYTHIQYLF True NCI_RA007_Epitope_Rep3 1170.5709598524602 1170.5698699358602 59.409 2 0.18919151503681922 0.0006801564359802754 0.9438714419765777 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 115756 22611 TVLQELINV True PC9_epitope_Rep3 1027.5913609438699 1027.59026993586 92.241 2 0.18918820149784132 0.0006801564359802754 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 9250 6537 AVQQPFINK True NCI_RA007_Epitope_Rep4 1043.5763795860698 1043.5752899358602 31.755 2 0.18918322295839668 0.0006801564359802754 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 107290 9376 SYQRAFNEF True NCI_RA007_Epitope_Rep3 1160.5250722892 1160.5239699358601 43.971 2 0.18918217325461273 0.0006801564359802754 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 36190 21038 GVFPDNFVKL True PC9_epitope_Rep5 1134.60734536118 1134.6062499358602 85.982 2 0.18918210286893644 0.0006801564359802754 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 31962 5844 GESPVDYDGGR True NCI_RA007_Epitope_Rep2 1150.4890807032998 1150.48798993586 27.349 2 0.1891735257626383 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 140545 13471 YYLNDLERI True NCI_RA007_Epitope_Rep5 1197.6029882567298 1197.60188993586 58.501 2 0.18917295673017312 0.0006801564359802754 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000128266|ENST00000615612|GNAZ'] 114855 7589 TTDGYLLR True NCI_RA007_Epitope_Rep5 937.48689587533 937.48578993586 35.882 2 0.18917051882647049 0.0006801564359802754 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000472161.1_1_18:57817108-57817555:+|nuORF'] 96433 6785 SEIGAITRSA True H1975_Epitope_Rep3 1003.52982331647 1003.52872993586 31.053 2 0.1891690885089296 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'ENSG00000134775|ENST00000590592|FHOD3'] 127545 19979 VQVPVPVTV True PC9_epitope_Rep2 936.5644179200399 936.56386496793 82.251 1 0.18916327570940802 0.0006801564359802754 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 31669 6946 GEIASFDKA True NCI_RA007_Epitope_Rep5 936.4552613938799 936.45416993586 33.403 2 0.18915203121739688 0.0006801564359802754 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 103649 15833 SRDMTMFVT True PC9_epitope_Rep3 1086.48380172418 1086.4827099358602 66.056 2 0.18914871537724426 0.0006801564359802754 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 107448 18212 SYVQVTSNF True PC9_epitope_Rep5 1043.49237517859 1043.4912699358601 75.064 2 0.1891422126143703 0.0006801564359802754 0.9438714419765777 ['ENSG00000072364|ENST00000265343|AFF4'] 37595 10139 GYSFTTTAER True PC9_epitope_Rep1 1131.51965255559 1131.5185499358602 43.875 2 0.1891353814107089 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 74725 24621 NLLDLLTEV True PC9_epitope_Rep5 1028.57537652656 1028.57426993586 99.83 2 0.18913336082953922 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 1431 11820 AEEGTAKLIEF True H1975_Epitope_Rep2 1206.6132185872596 1206.6121299358601 50.542 2 0.18912636338449768 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000561014.1_1_15:49531438-49610381:+|nuORF', 'ENST00000560119.5_1_15:49527865-49611209:+|nuORF'] 113414 8417 TQLQTTQSV True PC9_epitope_Rep1 1004.5138388991599 1004.51274993586 37.212 2 0.18912058035791565 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.E636Q|2|0.14|ENSG00000143569|chr1:154254887-154254887|G/C|missense_variant'] 132340 13299 VYLPTHTSL True PC9_epitope_Rep4 1029.54949613189 1029.54838993586 59.052 2 0.18911933419069546 0.0006801564359802754 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 41861 16569 IDTIEIITDR True PC9_epitope_Rep6 1187.63976768827 1187.6386699358602 76.173 2 0.18911711173974063 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 75683 15747 NQTPVTLQV True PC9_epitope_Rep4 998.5396597241801 998.53856993586 68.495 2 0.18911697865506727 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 87445 10464 QTELSQLLK True H1975_Epitope_Rep1 1058.5971746003 1058.5960699358602 45.204 2 0.18911417187140273 0.0006801564359802754 0.9438714419765777 ['ENST00000380591.7_1_5:72801034-72801127:+|nuORF'] 114356 13237 TSDELQFGY True H1975_Epitope_Rep2 1058.4556553167 1058.45454993586 56.045 2 0.1891125210061908 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 5329 15288 ALSKEGIVAL True PC9_epitope_Rep5 999.5964463243098 999.59534993586 63.814 2 0.18911143137995415 0.0006801564359802754 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 90412 18684 RIPAYFVTV True PC9_epitope_Rep4 1064.60186605792 1064.6007699358602 79.949 2 0.18910790018638587 0.0006801564359802754 0.9438714419765777 ['ENSG00000204394|ENST00000375663|VARS1', 'ENST00000461874.1_1_6:31749609-31749932:-|nuORF', 'ENST00000483275.1_1_6:31749724-31750195:-|nuORF'] 109584 8681 THDDSHLVSL True PC9_epitope_Rep4 1122.5305515924601 1122.5289149037899 40.883 3 0.1891063765019912 0.0006801564359802754 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 76180 19321 NRSQIYFTL True PC9_epitope_Rep5 1140.5927579262 1140.5916699358602 79.362 2 0.1891044274697909 0.0006801564359802754 0.9438714419765777 ['ENST00000472173.5_1_X:118112321-118146861:+|nuORF', 'nc|ENSG00000175556|Q496Y0-3|LONRF3', 'ENSG00000175556|ENST00000371628|LONRF3', 'nc|ENSG00000175556|Q496Y0-2|LONRF3'] 54037 12866 KYLSVQGQLF True NCI_RA007_Epitope_Rep2 1181.64445914589 1181.6433699358602 54.665 2 0.18910378497066482 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 39765 12669 HQADIGEYV True PC9_epitope_Rep1 1030.47197408718 1030.47086993586 53.602 2 0.18909819138585943 0.0006801564359802754 0.9438714419765777 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7', 'ENST00000562523.1_1_16:69375146-69375552:+|nuORF'] 75679 16731 NQTPVTLQV True PC9_epitope_Rep3 998.5396597241801 998.53856993586 69.494 2 0.18909133404923145 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 7099 7336 AQYEDIANR True PC9_epitope_Rep3 1078.5043368446197 1078.5032299358602 33.228 2 0.18908968346676536 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 14246 4749 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 22.553 2 0.18908331028119182 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 37600 10135 GYSFTTTAER True PC9_epitope_Rep3 1131.51965255559 1131.5185499358602 43.936 2 0.189082859171224 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 93448 5798 RSDPNSESLY True H1975_Epitope_Rep2 1166.52038083158 1166.5192899358601 27.291 2 0.18908026627982158 0.0006801564359802754 0.9438714419765777 ['SECISBP2L|p.A823Qfs*12|1|0.13|ENSG00000138593|chr15:48996524-48996524|A/-|frameshift_variant', 'ENSG00000138593|ENST00000559471|SECISBP2L', 'SECISBP2L|p.P614Hfs*12|1|0.22|ENSG00000138593|chr15:49011754-49011754|G/-|frameshift_variant'] 40099 5873 HRDGALTQL True PC9_epitope_Rep2 1009.53049202281 1009.52938993586 27.986 2 0.1890785981331662 0.0006801564359802754 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 41159 19817 HYSENMFSF True PC9_epitope_Rep5 1160.4596951513201 1160.4585899358601 81.275 2 0.18907230908563902 0.0006801564359802754 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 10091 9364 AYVHM[Oxidation]VTHF True PC9_epitope_Rep5 1119.5171508382302 1119.51604993586 40.973 2 0.18906744548003204 0.0006801564359802754 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 68735 14422 LVDHFMELY True H1975_Epitope_Rep2 1165.5477818797299 1165.54668993586 60.627 2 0.18906604843696842 0.0006801564359802754 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 6613 19033 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 78.238 2 0.18906379799546819 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 69915 15893 LYDIILKNF True NCI_RA007_Epitope_Rep4 1137.64339651673 1137.6422899358602 69.004 2 0.18905260479218164 0.0006801564359802754 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 23919 20012 EYNNIFHTF True PC9_epitope_Rep3 1183.52982331647 1183.5287299358602 82.224 2 0.18905237756762994 0.0006801564359802754 0.9438714419765777 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 7431 9143 ASDDFDQASY True H1975_Epitope_Rep2 1117.4199980839699 1117.41890993586 40.12 2 0.18905168420867197 0.0006801564359802754 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 23750 23719 EYIQFVPLL True PC9_epitope_Rep5 1120.6168474157198 1120.61574993586 96.216 2 0.1890433239471158 0.0006801564359802754 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 7836 6454 ATAGIIGVNR True NCI_RA007_Epitope_Rep3 970.5559784946599 970.55488993586 32.412 2 0.18903945757746224 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 67565 8144 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.5131299358602 36.276 2 0.18903802226125208 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 87815 20112 QVIPQFQTV True PC9_epitope_Rep1 1058.5760452328998 1058.57494993586 82.191 2 0.18903353387768992 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 29437 16583 FVHDLVLYL True H1975_Epitope_Rep2 1117.6171817688898 1117.6160899358601 69.012 2 0.18903189209164623 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 113938 18481 TRIWQDVQL True PC9_epitope_Rep4 1157.6193070272097 1157.61820993586 79.158 2 0.1890291170692507 0.0006801564359802754 0.9438714419765777 ['ENSG00000004766|ENST00000305866|VPS50', 'VPS50|p.S583Vfs*7|1|0.23|ENSG00000004766|chr7:93308938-93308938|A/-|frameshift_variant', 'VPS50|p.K778Nfs*7|1|0.13|ENSG00000004766|chr7:93349900-93349900|G/-|frameshift_variant', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 73025 12075 NDEELNKLLGK True PC9_epitope_Rep6 1271.6721304457099 1271.67049490379 57.767 3 0.18902618604472504 0.0006801564359802754 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 124680 19838 VLIPKLPQL True PC9_epitope_Rep4 1019.6743027221899 1019.67320993586 84.437 2 0.1890211451047042 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 41196 10244 IAAPFTSKL True H1975_Epitope_Rep1 946.5487678559 946.54766993586 44.347 2 0.18901890890005227 0.0006801564359802754 0.9438714419765777 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19758004-19758388:-|nuORF'] 116688 19174 TYISWKEEL True PC9_epitope_Rep5 1167.58119018299 1167.58008993586 78.79 2 0.18901211881720215 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 1245 4667 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 23.048 2 0.1889993757237459 0.0006801564359802754 0.9438714419765777 ['ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7', 'nc|ENSG00000243414|Q86XR7-2|TICAM2'] 90325 5508 RIFAPNHVVAK True NCI_RA007_Epitope_Rep4 1250.7247751552602 1250.72311490379 27.778 3 0.18899451353894994 0.0006801564359802754 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000600238.1_1_19:17972170-17973061:+|nuORF', 'ENST00000602216.1_1_19:17970765-17972392:+|nuORF'] 87857 21806 QVLEDFPTI True PC9_epitope_Rep1 1060.54407639828 1060.5429699358601 88.692 2 0.18899227106440875 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 96951 10288 SEVEVIHVP True H1975_Epitope_Rep1 1007.52876068731 1007.52766993586 44.517 2 0.18897830030937865 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 70767 9680 MEDQNIIQA True H1975_Epitope_Rep2 1060.4859098991599 1060.48480993586 42.216 2 0.18897417131242572 0.0006801564359802754 0.9438714419765777 ['FAM21A-LURAP1L|1|fusion', 'nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A', 'ENST00000374359.1_1_10:46274511-46281094:+|nuORF', 'FAM21C-LURAP1L|1|fusion', 'FAM21C-LURAP1L|2|fusion', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C'] 94606 18390 RYKLYQEMF True PC9_epitope_Rep5 1276.6274291827597 1276.62577490379 75.756 3 0.1889737522432243 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 132742 17665 VYSKDNPNLLF True PC9_epitope_Rep2 1308.67140216972 1308.6703099358601 73.229 2 0.18897243804727265 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 94544 20018 RYINNPLLI True PC9_epitope_Rep1 1114.6498788795 1114.6487899358601 81.825 2 0.18896412318603983 0.0006801564359802754 0.9438714419765777 ['TTLL5-RGS6|2|fusion', 'TTLL5-RGS6|5|fusion', 'TTLL5-RGS6|1|fusion', 'TTLL5-RGS6|8|fusion', 'TTLL5-RGS6|4|fusion', 'TTLL5-RGS6|6|fusion', 'TTLL5-RGS6|7|fusion', 'TTLL5-RGS6|3|fusion', 'ENSG00000119685|ENST00000298832|TTLL5', 'TTLL5|p.I678Sfs*12|1|0.11|ENSG00000119685|chr14:75771750-75771756|ATAGCAT/-|frameshift_variant', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 139370 5242 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 25.23 2 0.18896205529243326 0.0006801564359802754 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 74312 23050 NILEDLETLRL True PC9_epitope_Rep2 1327.7347307022699 1327.73362993586 94.154 2 0.18895824304093709 0.0006801564359802754 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1'] 128376 9168 VSDRVTVLY True H1975_Epitope_Rep1 1050.57095985246 1050.5698699358602 40.169 2 0.18895372298461968 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 115122 20109 TTYEGIFKTL True PC9_epitope_Rep5 1171.6124903112698 1171.6113899358602 82.396 2 0.18894303969634407 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 75403 15685 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 65.154 2 0.18893991797372908 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 18269 6651 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1176.6060254122801 1176.6049299358601 30.535 2 0.18893958550159698 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 136509 18592 YHLDSSGSYVF True PC9_epitope_Rep5 1273.5615173675699 1273.5604299358602 76.539 2 0.1889362450874582 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 116468 12528 TYAPAIHQI True PC9_epitope_Rep3 1012.5341804209202 1012.53308993586 53.213 2 0.18893616600765878 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant'] 137138 8900 YLDKGILKY True H1975_Epitope_Rep1 1111.62774645259 1111.62664993586 39.138 2 0.1889260623036131 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000070882|Q9H4L5-8|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-7|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-6|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-5|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-4|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-3|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-2|OSBPL3', 'ENSG00000070882|ENST00000313367|OSBPL3'] 70467 19255 LYSEVSHLL True PC9_epitope_Rep3 1059.56006081559 1059.5589699358602 79.286 2 0.18891758502845007 0.0006801564359802754 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 17749 9135 EHTNAIGTL True PC9_epitope_Rep3 954.4770594676199 954.47596993586 40.076 2 0.18891738919146336 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 114162 7208 TRSTFSTNY True PC9_epitope_Rep2 1075.49343780775 1075.4923499358601 33.115 2 0.18891617224328958 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 110710 2840 TKDGVVEITGK True NCI_RA007_Epitope_Rep1 1145.62920300457 1145.6275649037902 14.871 3 0.18891371122765663 0.0006801564359802754 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 123115 18236 VHDEGVWAL True PC9_epitope_Rep1 1024.4977949121999 1024.49668993586 74.936 2 0.18890933111717037 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 48450 6748 KEEEPSVKLP True H1975_Epitope_Rep2 1154.6183039676998 1154.61664490379 30.871 3 0.18890555466540399 0.0006801564359802754 0.9438714419765777 ['ENSG00000254505|ENST00000347519|CHMP4A', 'nc|ENSG00000254505|Q9BY43-2|CHMP4A'] 103631 19063 SRDLFTYTV True PC9_epitope_Rep3 1100.55022440788 1100.54912993586 78.549 2 0.18890551584976817 0.0006801564359802754 0.9438714419765777 ['ENSG00000121281|ENST00000673801|ADCY7'] 71133 19694 METVWTILP True H1975_Epitope_Rep1 1088.55761828744 1088.55707496793 81.977 1 0.18888966538235527 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 3641 8790 AGQAVDDFIEK True H1975_Epitope_Rep3 1191.57716743171 1191.57606993586 38.817 2 0.1888892858618091 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142657|P52209-2|PGD', 'ENSG00000142657|ENST00000270776|PGD'] 88372 6302 QYNPHVHQL True PC9_epitope_Rep5 1134.55704112382 1134.55540490379 29.216 3 0.18888636434056436 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 43255 21301 IHDGFGFML True PC9_epitope_Rep3 1035.48478770035 1035.4836899358602 87.23 2 0.18887983084606857 0.0006801564359802754 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 38608 19134 HHIPDVITYL True PC9_epitope_Rep2 1206.63970811862 1206.6386099358601 78.969 2 0.18887892813589488 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 123416 11554 VIDSAELQAY True H1975_Epitope_Rep1 1107.54480467427 1107.54370993586 49.428 2 0.1888760020907425 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 89032 10024 REEEQAFLV True H1975_Epitope_Rep2 1119.5560380643099 1119.5549499358601 43.548 2 0.18887458247260405 0.0006801564359802754 0.9438714419765777 ['ENSG00000196843|ENST00000357485|ARID5A'] 26125 11747 FHGISPGL True PC9_epitope_Rep6 826.43373810366 826.43264993586 56.343 2 0.18887214836395763 0.0006801564359802754 0.9438714419765777 ['ENSG00000174282|ENST00000380599|ZBTB4'] 91658 12802 RPFQSLIHA True PC9_epitope_Rep5 1067.58761297611 1067.58650993586 54.254 2 0.18886863904126006 0.0006801564359802754 0.9438714419765777 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 135842 11123 YEQLSSEALEA True H1975_Epitope_Rep2 1238.56666231766 1238.5655699358601 47.82 2 0.18885726917752382 0.0006801564359802754 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 54090 20906 KYMDINFDF True PC9_epitope_Rep2 1191.52704643515 1191.5259499358601 85.86 2 0.18885666711888244 0.0006801564359802754 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 8748 6980 AVDSQILPK True NCI_RA007_Epitope_Rep5 969.5494961318899 969.54838993586 33.53 2 0.18885106722305586 0.0006801564359802754 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF'] 132821 11269 VYTGIDHHW True PC9_epitope_Rep1 1126.51959298594 1126.51795490379 48.226 3 0.1888430603847828 0.0006801564359802754 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766226-105766550:+|nuORF'] 25403 13830 FEITPPVVLR True H1975_Epitope_Rep1 1169.68084465461 1169.6797499358602 58.344 2 0.18884233151346555 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000434232.1_1_7:36858782-36858980:+|nuORF', 'ENST00000412580.1_1_2:122466160-122466664:-|nuORF'] 35529 3685 GTIEKSKLITK True NCI_RA007_Epitope_Rep4 1216.7390878067197 1216.73743490379 20.284 3 0.18883866301649976 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1-MLLT3|1|fusion', 'NBEAL1|p.R1792Gfs*10|1|0.22|ENSG00000144426|chr2:203149143-203149143|T/-|frameshift_variant'] 129642 9867 VTHLLQQEL True NCI_RA007_Epitope_Rep4 1079.5975089534702 1079.59640993586 44.8 2 0.18883527915140122 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130303|Q10589-2|BST2', 'ENSG00000130303|ENST00000252593|BST2'] 16295 6084 EEIQETQTP True H1975_Epitope_Rep2 1073.48768372097 1073.4865899358601 28.377 2 0.18882442493585622 0.0006801564359802754 0.9438714419765777 ['ENSG00000155438|ENST00000285814|NIFK'] 86564 11605 QRATIDPEL True PC9_epitope_Rep5 1041.5454733806098 1041.54436993586 49.635 2 0.1888236775924788 0.0006801564359802754 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1'] 7561 3964 ASFQSTSVK True NCI_RA007_Epitope_Rep4 953.4818104948899 953.48070993586 21.486 2 0.18882206224898637 0.0006801564359802754 0.9438714419765777 ['ENSG00000050405|ENST00000341247|LIMA1', 'nc|ENSG00000050405|Q9UHB6-4|LIMA1', 'nc|ENSG00000050405|Q9UHB6-3|LIMA1', 'nc|ENSG00000050405|Q9UHB6-2|LIMA1', 'nc|ENSG00000050405|Q9UHB6-5|LIMA1'] 140915 19229 YYWQTSAKW True PC9_epitope_Rep5 1231.5662088251897 1231.5651099358602 79.004 2 0.18882200682202013 0.0006801564359802754 0.9438714419765777 ['ENSG00000142687|ENST00000325722|KIAA0319L', 'nc|ENSG00000142687|Q8IZA0-2|KIAA0319L', 'ENST00000476329.1_1_1:35998986-36020116:-|nuORF'] 32493 7796 GGNFGFGDSR True NCI_RA007_Epitope_Rep2 1012.4362572847999 1012.43516993586 34.952 2 0.18881718127842262 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 134920 7753 YADYSGQQSTY True H1975_Epitope_Rep2 1281.51496109797 1281.5138699358602 34.775 2 0.18881190423306857 0.0006801564359802754 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL'] 25991 11985 FHAIIQERL True PC9_epitope_Rep4 1125.62947778809 1125.62782490379 53.893 3 0.18881028326015653 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 31644 7667 GEHGLIIRV True NCI_RA007_Epitope_Rep3 992.57671393924 992.57560993586 37.279 2 0.18880674985398518 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 41060 15668 HYKPTPLYF True PC9_epitope_Rep1 1164.59678067748 1164.59568993586 65.089 2 0.18879163855059108 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 14090 13126 DSDSDLQLY True H1975_Epitope_Rep1 1054.44548455582 1054.44497496793 55.582 1 0.1887828643016668 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 26023 21268 FHDGFLLEV True PC9_epitope_Rep1 1075.53384606775 1075.53274993586 86.632 2 0.18878233285112114 0.0006801564359802754 0.9438714419765777 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'ENST00000586887.1_1_18:12698966-12699161:-|nuORF', 'ENST00000593250.5_1_18:12691430-12699161:-|nuORF'] 22961 17113 EVIEKFDYV True PC9_epitope_Rep2 1140.5702911461199 1140.56918993586 71.074 2 0.1887783930791393 0.0006801564359802754 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 104231 11402 SSDNIMVQY True H1975_Epitope_Rep2 1055.45936079815 1055.45826993586 48.908 2 0.18877679479169313 0.0006801564359802754 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 63875 21280 LPVEFTIDA True PC9_epitope_Rep2 1003.52261267771 1003.52207496793 87.316 1 0.188771047950474 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 6735 19701 AQDFRVLYV True PC9_epitope_Rep5 1109.58694426977 1109.58584993586 80.829 2 0.18875821697912018 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF'] 9222 7766 AVQEFGLAR True NCI_RA007_Epitope_Rep3 989.5294293936498 989.52832993586 37.669 2 0.18875599327436865 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 27764 20365 FQEEDFPAL True PC9_epitope_Rep4 1094.4920408254197 1094.49094993586 86.479 2 0.1887540642751035 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 105856 9107 SVIVQPFSK True NCI_RA007_Epitope_Rep4 1003.57023157647 1003.56912993586 41.87 2 0.18874450315724328 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000285253|Q6N043-2|ZNF280D', 'ENSG00000137871|ENST00000267807|ZNF280D', 'nc|ENSG00000285253|Q6N043-3|ZNF280D', 'nc|ENSG00000285253|Q6N043-6|ZNF280D'] 31596 6562 GEFVTTVQQR True H1975_Epitope_Rep3 1163.59348620219 1163.5923899358602 30.2 2 0.1887406623455079 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000014641|P40925-2|MDH1', 'ENSG00000014641|ENST00000233114|MDH1', 'nc|ENSG00000014641|P40925-3|MDH1'] 42020 9159 IEDTRYTLP True H1975_Epitope_Rep1 1106.56078909158 1106.5596899358602 40.137 2 0.18873115922534928 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant'] 96635 5968 SENEYIM[Oxidation]KA True H1975_Epitope_Rep3 1099.4855759264299 1099.48446993586 27.967 2 0.18872527720611587 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 132017 14407 VYGSFASKL True PC9_epitope_Rep1 970.5123823471799 970.51128993586 60.24 2 0.18872491167634298 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 134510 19357 WVDPNSPVL True PC9_epitope_Rep4 1025.51819600361 1025.51767496793 82.567 1 0.18870962985359543 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 47723 14561 IYQGRLWAF True NCI_RA007_Epitope_Rep4 1152.60801406752 1152.6069099358601 63.384 2 0.1887040066732732 0.0006801564359802754 0.9438714419765777 ['ENSG00000240247|ENST00000382689|DEFA1B', 'ENSG00000239839|ENST00000327857|DEFA3', 'ENSG00000206047|ENST00000382692|DEFA1'] 123650 15994 VILPTVHEV True PC9_epitope_Rep5 1005.5858816406101 1005.58478993586 66.511 2 0.18870141381052583 0.0006801564359802754 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 113909 15119 TRIGLETSL True PC9_epitope_Rep3 988.55530978832 988.55420993586 63.292 2 0.18869915752808636 0.0006801564359802754 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 14954 14550 DYQALRTSI True PC9_epitope_Rep2 1065.54547338061 1065.54436993586 61.239 2 0.18869275509474748 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 41650 15326 IDIIPNPQER True PC9_epitope_Rep1 1193.64043639461 1193.6393299358601 63.772 2 0.18868948977560324 0.0006801564359802754 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 6894 16244 AQIKPFYTV True PC9_epitope_Rep5 1065.5858816406098 1065.58478993586 67.472 2 0.188689140738649 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 1880 9301 AEIISEIRA True H1975_Epitope_Rep1 1000.55530978832 1000.55420993586 40.684 2 0.18868632159755871 0.0006801564359802754 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 113886 10501 TRHPENWTL True PC9_epitope_Rep5 1152.56760580752 1152.56596490379 45.378 3 0.18868345727422645 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 48206 16647 KAYTSQFVSL True PC9_epitope_Rep5 1142.5971746003 1142.5960699358602 69.038 2 0.1886806755333304 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 89613 9021 RETETVFVP True H1975_Epitope_Rep1 1076.5502244078798 1076.54912993586 39.606 2 0.18867608804408464 0.0006801564359802754 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 835 7116 ADEGISFR True NCI_RA007_Epitope_Rep4 893.42429561877 893.42318993586 33.993 2 0.1886738541020536 0.0006801564359802754 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 31654 6690 GEHSYTGIIHA True H1975_Epitope_Rep2 1183.56218607391 1183.56055490379 30.643 3 0.18867092033861116 0.0006801564359802754 0.9438714419765777 ['ENSG00000122912|ENST00000609923|SLC25A16'] 3393 9823 [Acetylation]-AGITTIEAVKR True H1975_Epitope_Rep3 1199.68738690333 1199.68628993586 42.811 2 0.18866866103224425 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 138410 13064 YRDPTTVTTL True PC9_epitope_Rep5 1165.59790287629 1165.5968099358602 55.257 2 0.1886586745747181 0.0006801564359802754 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 83011 22395 PYISNIYLI True PC9_epitope_Rep2 1094.60119735158 1094.60010993586 91.637 2 0.18865849543629842 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 57410 12949 LEIEKSLLV True H1975_Epitope_Rep2 1042.62741209942 1042.62630993586 54.923 2 0.18863551754350116 0.0006801564359802754 0.9438714419765777 ['ENSG00000164366|ENST00000296824|CCDC127'] 72913 10599 NAYQRAILL True H1975_Epitope_Rep2 1060.6029286870798 1060.60182993586 45.791 2 0.18863442244683656 0.0006801564359802754 0.9438714419765777 ['ENSG00000198677|ENST00000358746|SKIC3'] 42207 7483 IEGQGVFREA True NCI_RA007_Epitope_Rep3 1104.55637241748 1104.55526993586 36.556 2 0.1886266311301064 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 18098 4198 EILANDQGNR True NCI_RA007_Epitope_Rep2 1128.5523496662001 1128.5512499358601 20.969 2 0.18861801504541215 0.0006801564359802754 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 134915 9573 YADVGGKQF True PC9_epitope_Rep1 983.47124581119 983.47014993586 41.68 2 0.1886161159391979 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 46936 22292 IVLPEDLQL True PC9_epitope_Rep1 1038.5961119711399 1038.5950099358602 90.557 2 0.1886112068902294 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 72696 11475 MYLKTVDKF True PC9_epitope_Rep4 1143.5998174525898 1143.59818490379 51.9 3 0.18860255486538108 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 9047 19685 AVIPRLVQL True PC9_epitope_Rep2 1007.64915060351 1007.64804993586 81.104 2 0.18860123213451843 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 110085 20019 TIAEGLTLAQV True PC9_epitope_Rep4 1114.62338934814 1114.6222899358602 85.138 2 0.18859998591045363 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 67483 7482 LTEIKGSVY True H1975_Epitope_Rep3 1008.54916177872 1008.54806993586 33.76 2 0.1885994227059443 0.0006801564359802754 0.9438714419765777 ['ENSG00000153975|ENST00000368576|ZUP1', 'ENST00000471919.1_1_6:116981518-116989864:-|nuORF'] 48665 2633 KELEKTYSA True NCI_RA007_Epitope_Rep4 1067.54989005471 1067.5487899358602 14.75 2 0.18858493451798375 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 103524 12752 SRDDNM[Oxidation]FQI True PC9_epitope_Rep5 1140.48697290876 1140.4858699358601 54.057 2 0.18858328054501014 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 41927 6637 IEANEALVK True NCI_RA007_Epitope_Rep2 985.5444107514498 985.54330993586 30.428 2 0.18857389439512182 0.0006801564359802754 0.9438714419765777 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF'] 21063 10675 ERDMSNVSL True PC9_epitope_Rep1 1049.48115887189 1049.48006993586 45.952 2 0.18856879749843047 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 97019 9357 SEVQYIQEA True H1975_Epitope_Rep3 1065.4978544818498 1065.4967499358602 40.992 2 0.18856802072354717 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 31322 10595 GEAEKWAIP True H1975_Epitope_Rep2 999.5025459394698 999.50144993586 45.776 2 0.1885665563367946 0.0006801564359802754 0.9438714419765777 ['ENSG00000188636|ENST00000341255|RTL6'] 129807 19219 VTLDNGIIRV True PC9_epitope_Rep1 1098.6397081186199 1098.6386099358601 78.723 2 0.18856368317833758 0.0006801564359802754 0.9438714419765777 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75651254-75651557:-|nuORF', 'ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 125603 17087 VMAPRTVLL True PC9_epitope_Rep1 998.5946725024999 998.59356993586 70.55 2 0.18856257560889028 0.0006801564359802754 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 8419 6477 ATQTQFFHVK True NCI_RA007_Epitope_Rep3 1205.61930702721 1205.61766490379 32.509 3 0.1885489468041747 0.0006801564359802754 0.9438714419765777 ['KIRREL-PYHIN1|2|fusion', 'KIRREL-PYHIN1|1|fusion', 'ENST00000485134.1_1_1:158911778-158914889:+|nuORF', 'nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16', 'nc|ENSG00000163564|Q6K0P9-4|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-2|PYHIN1', 'ENSG00000163564|ENST00000368140|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-3|PYHIN1'] 96949 10077 SEVEVIHVP True H1975_Epitope_Rep1 1007.52876068731 1007.52766993586 43.697 2 0.18854857682445963 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 4508 10344 AKLRLEVNL True NCI_RA007_Epitope_Rep2 1054.6498788795 1054.6487899358601 44.825 2 0.18854575119484618 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 18800 12331 ELDTVTLEDIK True NCI_RA007_Epitope_Rep1 1274.6605627024999 1274.6594699358602 51.936 2 0.18854394831598645 0.0006801564359802754 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 39962 12251 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5439899358599 52.434 2 0.18854381361829056 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 138366 13601 YRDGLVEQL True PC9_epitope_Rep4 1091.56112344475 1091.56002993586 60.208 2 0.18854185951850572 0.0006801564359802754 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF'] 35506 6739 GTGIVSAPVPK True NCI_RA007_Epitope_Rep5 1024.59169529704 1024.5905899358602 32.596 2 0.1885398431077556 0.0006801564359802754 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 88456 15535 QYVDFHNQL True PC9_epitope_Rep5 1162.54072235334 1162.5396299358601 64.765 2 0.1885387965353029 0.0006801564359802754 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5', 'nc|ENSG00000134899|P28715-2|ERCC5'] 124288 6224 VLDETRTAY True H1975_Epitope_Rep2 1066.5294889632999 1066.52838993586 28.903 2 0.1885319335291976 0.0006801564359802754 0.9438714419765777 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-2|ASCC2', 'ENST00000458594.5_1_22:30197094-30223519:-|nuORF', 'nc|ENSG00000100325|Q9H1I8-3|ASCC2'] 104368 21265 SSFPRFYFV True PC9_epitope_Rep5 1148.5654805492 1148.5643899358602 86.846 2 0.18852805581598006 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 127033 20931 VPYLVGQVV True PC9_epitope_Rep1 972.5644179200399 972.56332993586 85.332 2 0.18852385586750847 0.0006801564359802754 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 131745 11618 VYAALQRQLL True NCI_RA007_Epitope_Rep4 1173.6869926642098 1173.6858899358601 51.642 2 0.1885221530265804 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 70440 13849 LYRLQFNEF True NCI_RA007_Epitope_Rep3 1228.6240580544797 1228.62296993586 61.805 2 0.18851984742728797 0.0006801564359802754 0.9438714419765777 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 47488 20388 IYKPVTDFF True PC9_epitope_Rep1 1128.5855472874398 1128.5844499358602 83.245 2 0.18851797588088087 0.0006801564359802754 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF', 'ENST00000472420.5_1_2:44123526-44126707:-|nuORF'] 127956 10389 VRPPVQVY True PC9_epitope_Rep4 956.5443511817998 956.54324993586 47.662 2 0.1885117061706772 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 21065 10896 ERDMSNVSL True PC9_epitope_Rep1 1049.48115887189 1049.48006993586 46.796 2 0.1885046231830485 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 107112 19584 SYMGHFDLL True PC9_epitope_Rep4 1081.49026700361 1081.48967496793 83.452 1 0.18849976435235963 0.0006801564359802754 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 65066 9900 LSDLGKLSY True H1975_Epitope_Rep3 994.5335117145801 994.53240993586 43.112 2 0.18848868852273087 0.0006801564359802754 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 140872 18046 YYTPITPHL True PC9_epitope_Rep5 1103.56514619603 1103.56404993586 74.428 2 0.18848715008902947 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 74402 20730 NIVDKFVIV True PC9_epitope_Rep3 1045.61718176889 1045.6160899358601 85.006 2 0.1884844028805914 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 40136 13602 HRDSGILGL True PC9_epitope_Rep5 966.5246783663799 966.52358993586 57.344 2 0.18848369382036748 0.0006801564359802754 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 111166 10880 TLETVPLER True PC9_epitope_Rep4 1056.5815245361598 1056.5804299358601 49.615 2 0.18847825613601732 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1'] 129287 2749 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 14.605 3 0.18847710172985468 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 108025 5501 TDEGIAYR True NCI_RA007_Epitope_Rep1 923.4348603024698 923.43376993586 25.469 2 0.18847456569070525 0.0006801564359802754 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF'] 45087 6404 IQRTPKIQVYS True H1975_Epitope_Rep1 1331.75613485319 1331.7550299358602 29.692 2 0.18847417626779592 0.0006801564359802754 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 45267 7894 IRYPDSHQL True PC9_epitope_Rep2 1127.57235683479 1127.57071490379 35.729 3 0.1884691302197757 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 77127 17523 NYATGQWTRF True PC9_epitope_Rep1 1242.57817049122 1242.5770699358602 72.197 2 0.188467300385601 0.0006801564359802754 0.9438714419765777 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 93900 10092 RVIEGDVVSA True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 43.691 2 0.1884611837611412 0.0006801564359802754 0.9438714419765777 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 113164 18019 TQDAVPLTL True PC9_epitope_Rep6 956.51786165044 956.51731496793 81.938 1 0.18845975133663417 0.0006801564359802754 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 107560 8957 TADVHGLYY True H1975_Epitope_Rep3 1037.48181049489 1037.4807099358602 39.448 2 0.18845025489353778 0.0006801564359802754 0.9438714419765777 ['ENST00000476493.5_1_1:33099602-33116090:-|nuORF'] 117638 9843 VAIEHLDKI True PC9_epitope_Rep6 1036.59169529704 1036.5905899358602 48.334 2 0.18844828992839055 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 71248 6775 M[Oxidation]GESDDSILR True NCI_RA007_Epitope_Rep1 1137.49720323929 1137.4961099358602 30.361 2 0.18844764632518304 0.0006801564359802754 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 106265 10054 SVQGIILYR True NCI_RA007_Epitope_Rep5 1047.6076797143498 1047.60658993586 45.311 2 0.18844342998206565 0.0006801564359802754 0.9438714419765777 ['SLC25A4|p.I186L|1|0.58|ENSG00000151729|chr4:185145208-185145208|A/C|missense_variant'] 60333 20568 LIGEFLEKV True PC9_epitope_Rep3 1046.60119735158 1046.60010993586 84.38 2 0.18843811137247946 0.0006801564359802754 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 3239 4966 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 24.469 2 0.18843558950358127 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 17271 21782 EHDAFIFAL True PC9_epitope_Rep3 1061.51819600361 1061.5170899358602 89.083 2 0.18843154245726249 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 138525 13814 YRLLPGPSA True PC9_epitope_Rep2 972.5392658013599 972.53816993586 58.419 2 0.18842488311640326 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 14980 20930 DYSSILQKF True PC9_epitope_Rep3 1099.55497543515 1099.5538699358601 85.785 2 0.1884246731988304 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 89421 4381 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 21.972 3 0.18842081403304678 0.0006801564359802754 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 131950 12722 VYFSKSEQL True PC9_epitope_Rep3 1099.5549754351498 1099.5538699358601 53.957 2 0.18841313446031485 0.0006801564359802754 0.9438714419765777 ['ENSG00000142627|ENST00000358432|EPHA2'] 101112 23330 SLVELLNQI True PC9_epitope_Rep5 1027.5913609438699 1027.59026993586 94.72 2 0.18840485068279372 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 28465 11666 FSEQVAMGY True H1975_Epitope_Rep1 1030.4429824580197 1030.4418899358602 49.862 2 0.18840200239070123 0.0006801564359802754 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 135278 11123 YAYTGRLEL True H1975_Epitope_Rep3 1084.5553097883198 1084.5542099358602 47.88 2 0.18839371306072647 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 94675 13099 RYLEKPMEI True PC9_epitope_Rep1 1177.6165301458898 1177.6154299358602 55.254 2 0.18838817800971994 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 88139 20116 QWPPDPPLHF True PC9_epitope_Rep4 1232.59784330664 1232.59674993586 85.512 2 0.1883832136176451 0.0006801564359802754 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 18752 11879 ELDPMAMTQKY True H1975_Epitope_Rep1 1325.5995597524102 1325.59846993586 50.692 2 0.18838297860844475 0.0006801564359802754 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 67378 15828 LTDTGYLQLY True H1975_Epitope_Rep2 1185.59175486669 1185.59064993586 66.075 2 0.1883818069174802 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 12137 8103 DIIPNPQER True H1975_Epitope_Rep1 1080.5563724174801 1080.55526993586 36.114 2 0.18837244617981588 0.0006801564359802754 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 34365 4342 GPSSVEDIK True NCI_RA007_Epitope_Rep5 930.4658260775799 930.46472993586 23.31 2 0.18837164423598057 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 44570 10644 IPEVFLTK True H1975_Epitope_Rep1 945.5535188831699 945.55242993586 45.899 2 0.18836752046105903 0.0006801564359802754 0.9438714419765777 ['CON__Q3MHN5', 'CON__ENSEMBL:ENSBTAP00000018229'] 119874 11385 VEVTEFEDIK True NCI_RA007_Epitope_Rep1 1207.59723416995 1207.59612993586 48.258 2 0.18835951386415625 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 27635 21372 FQAEIAQLM True PC9_epitope_Rep5 1049.52156713189 1049.52046993586 87.269 2 0.18835048882364372 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 92269 7784 RQLDTETNL True PC9_epitope_Rep2 1088.5462016566 1088.5451099358602 35.314 2 0.1883469750116138 0.0006801564359802754 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant'] 131817 22068 VYAPPVGGFSF True PC9_epitope_Rep1 1139.56514619603 1139.56404993586 89.694 2 0.18834525817584585 0.0006801564359802754 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 94521 20479 RYIDRIHIFF True PC9_epitope_Rep1 1378.7509899031 1378.74934490379 83.585 3 0.18834336712251046 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 136491 18048 YHISLEHEIL True PC9_epitope_Rep1 1252.64518742188 1252.6435349037902 74.214 3 0.18831087306454283 0.0006801564359802754 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant'] 28585 19030 FSPAGPILSIR True PC9_epitope_Rep2 1156.6604435632 1156.65934993586 78.563 2 0.1883094573475884 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 28942 13035 FTEQWTDGY True H1975_Epitope_Rep2 1145.4665543535698 1145.46544993586 55.259 2 0.1883091950177982 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 2116 8530 AELQRLVAA True H1975_Epitope_Rep2 969.5607295219298 969.55962993586 37.765 2 0.18830799656813085 0.0006801564359802754 0.9438714419765777 ['ENSG00000150779|ENST00000504148|TIMM8B'] 64113 4971 LQEEM[Oxidation]LQR True NCI_RA007_Epitope_Rep1 1061.51754476105 1061.51644993586 23.418 2 0.1882982432135088 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'VIM|p.E187G|1|0.33|ENSG00000026025|chr10:17229982-17229982|A/G|missense_variant'] 104732 9215 STDKAEYTFY True H1975_Epitope_Rep3 1223.53463391339 1223.53352993586 40.437 2 0.1882781158141302 0.0006801564359802754 0.9438714419765777 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 107034 22610 SYLPFTEAF True PC9_epitope_Rep2 1073.5069626135698 1073.5058699358601 92.468 2 0.18827384154930002 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 2030 6399 AELDEKISA True H1975_Epitope_Rep1 974.49204082542 974.49094993586 29.673 2 0.18827253668540578 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151332|Q9NS73-5|MBIP', 'ENSG00000151332|ENST00000416007|MBIP'] 139061 17545 YSLDHISSL True PC9_epitope_Rep5 1033.5080252427301 1033.5069299358602 72.494 2 0.18825099859976233 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 43032 8883 IGGIGTVPVGR True NCI_RA007_Epitope_Rep1 1024.6029286870798 1024.60182993586 38.554 2 0.1882444236904752 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 70994 14254 MEQLRLLVC True H1975_Epitope_Rep2 1103.58312184263 1103.5820299358602 59.978 2 0.18823673667331525 0.0006801564359802754 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1', 'ENST00000460721.1_1_X:140270590-140271194:-|nuORF'] 76454 17264 NTATIFHEL True PC9_epitope_Rep1 1044.52400966004 1044.52290993586 71.225 2 0.18823065424413077 0.0006801564359802754 0.9438714419765777 ['ENSG00000183735|ENST00000331710|TBK1'] 23643 18495 EYGIFNQKI True PC9_epitope_Rep3 1110.57095985246 1110.5698699358602 76.357 2 0.18822979047896385 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 14905 13352 DYKESFNTI True PC9_epitope_Rep6 1115.5135045459901 1115.5124099358602 63.021 2 0.18822839084448478 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 21264 8010 ERIMKAQAL True PC9_epitope_Rep1 1058.5906497512199 1058.58954993586 35.63 2 0.18822812451240709 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 94371 14758 RYAVEILTW True NCI_RA007_Epitope_Rep3 1149.61824439805 1149.6171499358602 65.465 2 0.18822323362635135 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 138263 15843 YQVGVHYEL True PC9_epitope_Rep2 1106.5396597241802 1106.53856993586 66.198 2 0.18821824216126293 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 103782 11465 SRFPQGAQL True PC9_epitope_Rep5 1002.5246783663797 1002.52358993586 49.098 2 0.18821785604117308 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 90980 21417 RLIESLFTI True PC9_epitope_Rep2 1090.63864548946 1090.63754993586 87.853 2 0.1882137465923092 0.0006801564359802754 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 102043 5997 SPPPPPPPP True NCI_RA007_Epitope_Rep5 881.4647038787699 881.46360993586 29.751 2 0.18820614151296305 0.0006801564359802754 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 54068 22899 KYLVIGDLLF True PC9_epitope_Rep1 1179.69034670915 1179.68924993586 92.879 2 0.18820215819758926 0.0006801564359802754 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 125141 14487 VLPSIVNEVLK True H1975_Epitope_Rep1 1209.7332741502898 1209.7321699358602 60.924 2 0.18819632557185556 0.0006801564359802754 0.9438714419765777 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2', 'ENST00000544888.5_1_12:7077022-7079603:-|nuORF'] 75996 20794 NRIQDLLEL True PC9_epitope_Rep2 1112.61897267404 1112.6178699358602 85.425 2 0.1881915880563471 0.0006801564359802754 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 39922 8670 HQLSQLQAL True NCI_RA007_Epitope_Rep3 1036.5665431783598 1036.5654499358602 41.185 2 0.18818311003586444 0.0006801564359802754 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 31646 8464 GEHGLIIRV True NCI_RA007_Epitope_Rep4 992.57671393924 992.57560993586 39.365 2 0.18818084296176157 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 136834 22331 YIVDLLTHL True PC9_epitope_Rep5 1085.61209638845 1085.61098993586 90.905 2 0.18816235670776182 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2', 'GFOD2|p.V233Cfs*3|1|0.17|ENSG00000141098|chr16:67675617-67675618|-/C|frameshift_variant'] 138676 17278 YRTDMIQAL True PC9_epitope_Rep1 1109.55392988933 1109.55282993586 71.278 2 0.18816192736514517 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 4952 20179 ALIDRMVNL True PC9_epitope_Rep1 1043.57975071435 1043.57864993586 82.447 2 0.18815335669817942 0.0006801564359802754 0.9438714419765777 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 28174 19352 FRNIPGITL True PC9_epitope_Rep2 1029.5971150306498 1029.5960099358601 79.813 2 0.18815235953009626 0.0006801564359802754 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 113618 14425 TRDAGYGGLSL True PC9_epitope_Rep2 1108.5512870370399 1108.55018993586 60.755 2 0.18814287024096857 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 139976 21110 YVITDLTQL True PC9_epitope_Rep4 1064.57537652656 1064.57426993586 89.362 2 0.18814272348762592 0.0006801564359802754 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 28419 14370 FSEDGEYFAY True H1975_Epitope_Rep1 1226.4767846840998 1226.4762749679298 60.467 1 0.18812943264272813 0.0006801564359802754 0.9438714419765777 ['ENSG00000085377|ENST00000652536|PREP', 'PREP-SIM1|1|fusion'] 88090 20213 QVVPVLVHL True PC9_epitope_Rep1 1002.6226015025 1002.62150993586 82.578 2 0.1881287673860759 0.0006801564359802754 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 117139 16038 TYSPALNKMF True PC9_epitope_Rep6 1170.5743309807401 1170.5732299358601 74.014 2 0.1881283827043128 0.0006801564359802754 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 76111 5043 NRPGTVSSL True PC9_epitope_Rep4 929.49304388493 929.49194993586 26.028 2 0.18812630435903754 0.0006801564359802754 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 32494 7408 GGNFGFGDSR True NCI_RA007_Epitope_Rep4 1012.4362572847999 1012.43516993586 35.137 2 0.18812257448456549 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 75405 15872 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 65.86 2 0.18810992766019527 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 88861 4619 REAEFTKSIA True NCI_RA007_Epitope_Rep3 1150.59823722946 1150.5971499358602 25.083 2 0.1881079754493845 0.0006801564359802754 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 111086 12750 TLEEDEEELFK True H1975_Epitope_Rep1 1380.6296564970396 1380.62854993586 54.103 2 0.18809515818031466 0.0006801564359802754 0.9438714419765777 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF'] 114470 5133 TSERTVLRY True H1975_Epitope_Rep3 1123.5985715826298 1123.59746993586 24.848 2 0.18809350033612265 0.0006801564359802754 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 46402 4255 ITITNDQNR True NCI_RA007_Epitope_Rep4 1073.5465360097699 1073.54542993586 22.693 2 0.18809025397127138 0.0006801564359802754 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 130623 16242 VVAGRFIEV True PC9_epitope_Rep5 988.5705659296399 988.56946993586 67.464 2 0.18808897013213352 0.0006801564359802754 0.9438714419765777 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 54173 16270 KYPDIISRI True PC9_epitope_Rep1 1103.63389446219 1103.63278993586 67.401 2 0.1880833843895899 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 114465 4942 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 24.092 3 0.18808330833615083 0.0006801564359802754 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 83906 9199 QEISHLIEP True NCI_RA007_Epitope_Rep3 1064.55022440788 1064.54912993586 43.278 2 0.18808069912561298 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 105538 7421 SVDPTQTEY True H1975_Epitope_Rep1 1038.45056993626 1038.4494699358602 33.548 2 0.18807485778348518 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 1678 12538 AEGNEFWSA True H1975_Epitope_Rep2 1009.41412485789 1009.41357496793 53.321 1 0.18806878294933568 0.0006801564359802754 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000527897.1_1_11:64953408-64953522:+|nuORF'] 113873 11789 TRFEVQSAV True PC9_epitope_Rep1 1035.5349086969097 1035.53380993586 50.217 2 0.18806331551023361 0.0006801564359802754 0.9438714419765777 ['ENSG00000166016|ENST00000435224|ABTB2'] 116592 19202 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 81.96 2 0.18805416712972087 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 7418 5299 ASATVAIPK True NCI_RA007_Epitope_Rep3 856.50181766348 856.50072993586 27.855 2 0.18804031101745095 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 105927 19163 SVLDVDGMKV True PC9_epitope_Rep3 1061.54269649929 1061.5415899358602 78.93 2 0.18804012756001148 0.0006801564359802754 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 14977 15274 DYSSILQKF True NCI_RA007_Epitope_Rep5 1099.55497543515 1099.5538699358601 65.444 2 0.18803969575347976 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 113369 12125 TQLEQKVEL True PC9_epitope_Rep5 1086.5920892198599 1086.59098993586 51.627 2 0.18803898994980256 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 115235 7700 TVDARVYSY True H1975_Epitope_Rep2 1072.5189242796 1072.5178299358602 34.572 2 0.18803042456222202 0.0006801564359802754 0.9438714419765777 ['ENST00000378952.7_1_10:12209703-12222485:-|nuORF', 'ENSG00000165609|ENST00000491614|NUDT5'] 28470 9365 FSEQVAM[Oxidation]GY True H1975_Epitope_Rep2 1046.4378974580197 1046.4367899358601 40.984 2 0.18802477312350555 0.0006801564359802754 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 47588 6887 IYNGDM[Oxidation]EKI True PC9_epitope_Rep4 1097.50631137101 1097.5052099358602 33.711 2 0.1880177758369703 0.0006801564359802754 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 139102 10361 YSNKEIFL True H1975_Epitope_Rep3 1012.5229470308799 1012.52184993586 44.908 2 0.18801663332796895 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 108385 10191 TEDWDQPVA True H1975_Epitope_Rep2 1059.45090428943 1059.45037496793 44.204 1 0.1880161154828266 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 60182 11444 LHYPSTTAL True PC9_epitope_Rep6 1001.51819600361 1001.51708993586 55.08 2 0.1880157474639739 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 113199 8181 TQDPTVTRL True PC9_epitope_Rep2 1029.5454733806098 1029.54436993586 36.824 2 0.18800865355701077 0.0006801564359802754 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 8216 5489 ATIEEAYSR True NCI_RA007_Epitope_Rep3 1038.4981888350198 1038.49708993586 28.595 2 0.18800369728040872 0.0006801564359802754 0.9438714419765777 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-2|FCHO2'] 31749 7806 GELERALSA True H1975_Epitope_Rep1 944.4927095317598 944.49160993586 34.98 2 0.18800329645549138 0.0006801564359802754 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G'] 6732 19313 AQDFRVLYV True PC9_epitope_Rep2 1109.58694426977 1109.58584993586 79.661 2 0.18800211834295727 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF', 'ENST00000572819.6_1_17:1939773-1940251:+|nuORF'] 75346 15552 NQAKYIPEL True PC9_epitope_Rep3 1074.57095985246 1074.5698699358602 64.968 2 0.18799596428780205 0.0006801564359802754 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 29379 14281 FVEPSRQFV True PC9_epitope_Rep5 1107.5712942056298 1107.57018993586 59.935 2 0.1879934759915395 0.0006801564359802754 0.9438714419765777 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 28361 11789 FSDIHDFEY True H1975_Epitope_Rep1 1171.48220441771 1171.48110993586 50.338 2 0.1879919081335735 0.0006801564359802754 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.E275*|1|0.26|ENSG00000196455|chr3:130735917-130735918|-/A|frameshift_variant'] 7986 5798 ATDMPVKNQY True H1975_Epitope_Rep2 1165.54375912845 1165.5426699358602 27.291 2 0.1879917282156973 0.0006801564359802754 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 72111 13453 MRDPTFVRL True PC9_epitope_Rep2 1133.60154878809 1133.59990490379 57.026 3 0.18798744443928844 0.0006801564359802754 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 3249 6325 AGFAGDDAPR True PC9_epitope_Rep3 975.4410083120698 975.43990993586 29.36 2 0.1879852968908105 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77210 11196 NYIDKVRFL True NCI_RA007_Epitope_Rep3 1166.64479349906 1166.64313490379 51.145 3 0.18797987010155565 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 106761 13280 SYFPEITHI True NCI_RA007_Epitope_Rep3 1105.54441075145 1105.5433099358602 59.507 2 0.1879727100748405 0.0006801564359802754 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 134903 13511 YADPTKRLEL True PC9_epitope_Rep1 1204.6451874218799 1204.6435349037902 56.825 3 0.18797262723253996 0.0006801564359802754 0.9438714419765777 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'GTF3C5|p.P179Rfs*26|1|0.09|ENSG00000148308|chr9:133043887-133043887|C/-|frameshift_variant'] 40478 9970 HSDVTEAMLY True H1975_Epitope_Rep3 1164.512124647 1164.51102993586 43.383 2 0.18797170062038543 0.0006801564359802754 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 64623 13634 LREPLPATL True PC9_epitope_Rep6 1008.59678067748 1008.59568993586 64.211 2 0.18796732697971766 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 102915 16508 SQIHDIVLV True PC9_epitope_Rep2 1022.5760452328999 1022.57494993586 68.74 2 0.18795931961669063 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 40450 7690 HSDPESDFY True H1975_Epitope_Rep3 1095.41451878071 1095.4134299358602 34.561 2 0.18795829405977613 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 77395 17774 NYLSIFRKF True PC9_epitope_Rep6 1186.6498788795 1186.6482449037899 81.002 3 0.18795811015663647 0.0006801564359802754 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 136030 21897 YFQNTQGLIF True PC9_epitope_Rep5 1229.6080736371698 1229.6069699358602 89.264 2 0.18795448258979433 0.0006801564359802754 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 130710 8474 VVDKIDYY True H1975_Epitope_Rep2 1013.5069626135701 1013.50586993586 37.547 2 0.18795209049924877 0.0006801564359802754 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant'] 87882 19840 QVLPHLLEV True PC9_epitope_Rep2 1046.6124307416198 1046.61132993586 81.706 2 0.18794474054730778 0.0006801564359802754 0.9438714419765777 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 14258 5285 DSYVGDEAQSK True PC9_epitope_Rep1 1197.51496109797 1197.5138699358602 25.171 2 0.18793644911336713 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 47405 12008 IYIKHPHLF True PC9_epitope_Rep4 1166.66004964038 1166.6584049037901 53.987 3 0.18793561558673072 0.0006801564359802754 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 3984 21411 AHFDGLIFV True PC9_epitope_Rep5 1017.5283667644899 1017.52726993586 87.421 2 0.18793258989575645 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 82123 11092 PTDAYQLNY True H1975_Epitope_Rep2 1083.48728979815 1083.48618993586 47.7 2 0.18792641723769202 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 8852 8832 AVFPSIVGRPR True NCI_RA007_Epitope_Rep5 1197.69822605425 1197.6971299358602 40.637 2 0.18792583875596766 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 88929 6471 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 29.807 2 0.18792556760994664 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 91249 12356 RLTEEFQNV True PC9_epitope_Rep2 1134.56693710118 1134.5658499358601 52.837 2 0.1879189987084341 0.0006801564359802754 0.9438714419765777 ['ENST00000486040.1_1_7:2274759-2277695:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000467199.5_1_7:2274759-2281791:-|nuORF'] 118890 8553 VEEPGELEA True H1975_Epitope_Rep2 971.4447562798299 971.4442049679301 37.854 1 0.1879139236460685 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000275183|Q96B70|LENG9', 'ENSG00000275183|ENST00000611161|LENG9'] 86599 15174 QRDFNSELL True PC9_epitope_Rep5 1120.5512870370399 1120.55018993586 63.375 2 0.18790327863118725 0.0006801564359802754 0.9438714419765777 ['ENSG00000042429|ENST00000251871|MED17'] 32619 15458 GHFEKPLFL True PC9_epitope_Rep2 1086.58621599378 1086.5851099358601 64.737 2 0.18789214922151282 0.0006801564359802754 0.9438714419765777 ['PNPLA6|p.D881Tfs*24|1|0.35|ENSG00000032444|chr19:7554696-7554696|G/-|frameshift_variant', 'ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6', 'nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 104094 21312 SRVPLLLPL True PC9_epitope_Rep1 1006.65390163078 1006.65280993586 86.804 2 0.18788903544511223 0.0006801564359802754 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 94773 10075 RYLPQTYVV True NCI_RA007_Epitope_Rep3 1137.61824439805 1137.6171499358602 46.723 2 0.18787771628819708 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078596|O43736-2|ITM2A', 'ENST00000469541.5_1_X:78616588-78622401:-|nuORF', 'ENSG00000078596|ENST00000373298|ITM2A'] 103449 14668 SRAFLAQAL True PC9_epitope_Rep4 975.5501648382298 975.54906993586 64.355 2 0.1878771381607665 0.0006801564359802754 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 21478 5497 ERQPGAASL True PC9_epitope_Rep3 927.4773938207899 927.47628993586 26.219 2 0.18786830132480348 0.0006801564359802754 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 49354 8237 KIFSGVFVK True NCI_RA007_Epitope_Rep3 1023.6117024656298 1023.61060993586 39.535 2 0.18786660823942838 0.0006801564359802754 0.9438714419765777 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 119875 11158 VEVTEFEDIK True NCI_RA007_Epitope_Rep2 1207.59723416995 1207.59612993586 47.984 2 0.18786635320417294 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 28798 12791 FTDEEVDEMY True H1975_Epitope_Rep3 1276.4805497352 1276.4794499358602 54.418 2 0.18786294793851316 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 92105 13178 RPYEPINSI True PC9_epitope_Rep5 1087.56620882519 1087.5651099358602 55.695 2 0.18786273890343366 0.0006801564359802754 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2', 'GTF3C2|p.A731Cfs*26|1|0.4|ENSG00000115207|chr2:27328533-27328534|-/A|frameshift_variant'] 140597 15437 YYLTPDGQRF True PC9_epitope_Rep4 1258.59823722946 1258.5971499358602 67.312 2 0.18785809695330055 0.0006801564359802754 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 130934 13354 VVINFDFPK True NCI_RA007_Epitope_Rep3 1077.5858816406098 1077.58478993586 59.792 2 0.1878576664274769 0.0006801564359802754 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 36403 15491 GVIDLIFEK True NCI_RA007_Epitope_Rep3 1032.58554728744 1032.5844499358602 68.494 2 0.18785744815494504 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 7778 5178 ASVNTLVNK True NCI_RA007_Epitope_Rep4 944.52909504048 944.52798993586 26.443 2 0.1878495432646928 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 93897 21204 RVIDYILDL True PC9_epitope_Rep4 1118.63356010902 1118.6324699358602 89.726 2 0.1878412062473929 0.0006801564359802754 0.9438714419765777 ['ID3|p.Q71K|1|0.16|ENSG00000117318|chr1:23559216-23559216|G/T|missense_variant', 'ENSG00000117318|ENST00000374561|ID3'] 47865 11536 IYTNLNQKI True PC9_epitope_Rep2 1105.61315901761 1105.61206993586 49.699 2 0.187836856871805 0.0006801564359802754 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 18332 21052 EIVTTIPTI True PC9_epitope_Rep3 985.56956287013 985.56846993586 86.257 2 0.18783010101513145 0.0006801564359802754 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 21254 11581 ERIGETPEL True PC9_epitope_Rep2 1042.5294889632999 1042.52838993586 49.872 2 0.18782736729996088 0.0006801564359802754 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 49332 7181 KIDEHHFVAV True PC9_epitope_Rep6 1193.6193070272102 1193.61766490379 36.703 3 0.18782691272447208 0.0006801564359802754 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 35636 9646 GTLSSWNLK True NCI_RA007_Epitope_Rep5 1004.52909504048 1004.52798993586 43.741 2 0.18782417598549783 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 67342 8363 LTDRELEEY True H1975_Epitope_Rep3 1166.54553295026 1166.54442993586 37.151 2 0.1878187587774409 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 6819 11756 AQHDPLLTGV True PC9_epitope_Rep6 1049.55055876105 1049.54946993586 56.38 2 0.18781575487820631 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133136|A0A804HLA8|GNG5B', 'ENSG00000174021|ENST00000370645|GNG5'] 67108 12038 LTDDDLLRY True H1975_Epitope_Rep2 1122.55570371114 1122.55460993586 51.385 2 0.1878116479139944 0.0006801564359802754 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 6617 19443 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 79.838 2 0.1878041443821135 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 9226 8151 AVQEFGLAR True NCI_RA007_Epitope_Rep5 989.5294293936498 989.52832993586 38.035 2 0.18780353914650805 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 136318 13798 YGYPDPSYL True H1975_Epitope_Rep1 1073.47057710485 1073.47007496793 58.218 1 0.18779556150496923 0.0006801564359802754 0.9438714419765777 ['ENSG00000163840|ENST00000296161|DTX3L', 'nc|ENSG00000163840|Q8TDB6-2|DTX3L'] 36674 19445 GVLSDLTKV True PC9_epitope_Rep3 930.53859709502 930.53750993586 80.021 2 0.18779236108902625 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 126702 8438 VPRPPDTVST True PC9_epitope_Rep3 1067.56112344475 1067.56002993586 37.42 2 0.18778619696967053 0.0006801564359802754 0.9438714419765777 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 9996 8879 AYSSYVHQY True PC9_epitope_Rep6 1116.48762415132 1116.48652993586 44.096 2 0.18777749066005486 0.0006801564359802754 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 17711 16909 EHSLVIDTL True PC9_epitope_Rep2 1025.53932537101 1025.53822993586 70.284 2 0.18777183914588172 0.0006801564359802754 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 77604 19935 NYTLVSHLI True PC9_epitope_Rep1 1058.5760452329 1058.57494993586 81.5 2 0.1877689306318275 0.0006801564359802754 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 65061 12668 LSDLGISSY True H1975_Epitope_Rep2 953.47057710485 953.47002496793 53.827 1 0.18776136231156984 0.0006801564359802754 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1'] 37576 18770 GYSEHFVEF True PC9_epitope_Rep3 1113.47672511445 1113.47562993586 77.419 2 0.1877427089042321 0.0006801564359802754 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 89790 16535 RFEEAHFTF True PC9_epitope_Rep5 1182.5458077337796 1182.54470993586 68.604 2 0.18773981225617856 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 105775 15868 SVIEQGGIQTV True PC9_epitope_Rep5 1129.59790287629 1129.5968099358602 66.028 2 0.18772590260045313 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'ENST00000566321.5_1_15:29046634-29050027:+|nuORF', 'ENST00000562423.5_1_15:29046609-29050027:+|nuORF'] 43319 11641 IHEPEPHIL True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 49.773 2 0.18771391616930272 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 46592 5598 ITSDTSGDFR True NCI_RA007_Epitope_Rep1 1097.4989171110099 1097.4978299358602 25.84 2 0.18770176087697102 0.0006801564359802754 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 67200 9163 LTDITKGVQY True H1975_Epitope_Rep1 1136.607739284 1136.60664993586 40.152 2 0.18770171629140364 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 207 7790 AAFHQIEAV True NCI_RA007_Epitope_Rep3 984.5028802926398 984.50178993586 37.767 2 0.18769879096925027 0.0006801564359802754 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 23723 23195 EYINFLENL True PC9_epitope_Rep2 1153.5655401188499 1153.56444993586 94.701 2 0.18769470645767175 0.0006801564359802754 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 27667 20445 FQDEINWRL True PC9_epitope_Rep1 1219.5985715826298 1219.59746993586 83.451 2 0.18768929104584287 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF'] 135857 5678 YEQSAQAAQQV True H1975_Epitope_Rep2 1221.56257999673 1221.5614899358602 26.838 2 0.1876876342879745 0.0006801564359802754 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 103199 10423 SQQKQLLEV True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 45.413 2 0.18768542657470366 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 33028 18870 GIYTGFIKV True PC9_epitope_Rep4 996.5644179200399 996.56332993586 80.669 2 0.18768334415519405 0.0006801564359802754 0.9438714419765777 ['ENSG00000153179|ENST00000542104|RASSF3'] 103725 7236 SREPSQMEM True PC9_epitope_Rep5 1093.4532298718898 1093.45212993586 32.796 2 0.1876607920768836 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 88855 5056 REAEFTKSIA True H1975_Epitope_Rep2 1150.59823722946 1150.5971499358602 24.53 2 0.18765737956023976 0.0006801564359802754 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 12635 6699 DLEGLSQR True H1975_Epitope_Rep3 916.46140940348 916.46030993586 30.722 2 0.1876485257822528 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 54377 15977 KYQIINEEF True PC9_epitope_Rep4 1182.5920892198599 1182.59098993586 69.386 2 0.1876460306369343 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 76391 13739 NSLESYAFNM[Oxidation]K True PC9_epitope_Rep2 1318.5863525968596 1318.58524993586 58.135 2 0.18764388357001174 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 34566 9588 GQFQGRPVSV True PC9_epitope_Rep5 1073.5617921510898 1073.5606899358602 41.841 2 0.18763668260969402 0.0006801564359802754 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 23814 16481 EYLIVFPKL True NCI_RA007_Epitope_Rep3 1120.6532329244399 1120.65212993586 72.615 2 0.187636483954678 0.0006801564359802754 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 109124 19596 TFITSGMRF True PC9_epitope_Rep3 1058.5219014850597 1058.5208099358601 80.613 2 0.18763448499082772 0.0006801564359802754 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 75378 17458 NQDKNFAFL True PC9_epitope_Rep2 1095.53490869691 1095.53380993586 72.404 2 0.18763227197313892 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 76468 5727 NTDEM[Oxidation]VELR True NCI_RA007_Epitope_Rep2 1121.5022886197298 1121.50118993586 26.893 2 0.1876268564719863 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000483135.1_1_9:86591819-86593167:-|nuORF'] 134128 16464 WRDPDEPVL True PC9_epitope_Rep3 1125.5454733806098 1125.54436993586 68.466 2 0.1876264753296158 0.0006801564359802754 0.9438714419765777 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000487654.5_1_1:46033819-46034819:+|nuORF'] 27063 21182 FLPDPSALQNL True PC9_epitope_Rep4 1213.6342883850098 1213.6331899358602 89.639 2 0.1876259315738536 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 104832 6850 STEERTFQY True H1975_Epitope_Rep2 1159.51456717515 1159.51346993586 31.267 2 0.18762332157728107 0.0006801564359802754 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT', 'nc|ENSG00000005469|Q9UKG9-2|CROT'] 75022 14672 NMDNMFESY True H1975_Epitope_Rep2 1149.41069635357 1149.4095899358601 61.596 2 0.18759060741680714 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 21356 20547 ERLLGNFSL True PC9_epitope_Rep3 1047.57129420563 1047.57018993586 84.298 2 0.18758585170543648 0.0006801564359802754 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 103702 9665 SRDTTMYAV True PC9_epitope_Rep5 1042.47534521546 1042.4742499358601 42.143 2 0.1875826401636272 0.0006801564359802754 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA'] 86196 7693 QPTSVLDKATA True PC9_epitope_Rep4 1129.59790287629 1129.5968099358602 36.973 2 0.18757688185369387 0.0006801564359802754 0.9438714419765777 ['DEPP1|p.R149Kfs*6|1|0.44|ENSG00000165507|chr10:44977585-44977586|-/T|frameshift_variant', 'ENSG00000165507|ENST00000298295|DEPP1'] 107398 13691 SYTHIQYLF True NCI_RA007_Epitope_Rep4 1170.5709598524602 1170.5698699358602 59.888 2 0.18757602936061454 0.0006801564359802754 0.9438714419765777 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 104247 9446 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4608749679298 41.337 1 0.18757225510665052 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 23882 7267 EYMKHTRLF True NCI_RA007_Epitope_Rep4 1223.6121134717898 1223.61100993586 34.588 2 0.18756557602241108 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 34564 9611 GQFQGRPVSV True PC9_epitope_Rep1 1073.5617921510898 1073.5606899358602 41.825 2 0.18755927940392544 0.0006801564359802754 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 6615 19255 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 79.105 2 0.18755868154882854 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 86523 14617 QRALLANAL True PC9_epitope_Rep5 968.5767139392399 968.57560993586 61.225 2 0.18755154072178987 0.0006801564359802754 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 22379 6437 ETERLTDDY True H1975_Epitope_Rep2 1140.4934973773998 1140.49240993586 29.68 2 0.1875508377152669 0.0006801564359802754 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000505306.5_1_17:48154319-48165696:+|nuORF'] 124258 20112 VLDDKLVFV True PC9_epitope_Rep2 1046.60119735158 1046.60010993586 82.769 2 0.18755048619126752 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 117216 18962 TYTSYLDKF True PC9_epitope_Rep5 1136.5389910178399 1136.5378899358602 77.961 2 0.18754863764571544 0.0006801564359802754 0.9438714419765777 ['ENSG00000069956|ENST00000261845|MAPK6'] 113499 7005 TQSPSVKSL True PC9_epitope_Rep5 945.51311062317 945.51200993586 31.912 2 0.18752975225076315 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A'] 102959 22146 SQIPFPLSL True PC9_epitope_Rep4 1000.5593325396 1000.55822993586 93.402 2 0.18752887699327353 0.0006801564359802754 0.9438714419765777 ['ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 97911 5840 SHMEGVASV True PC9_epitope_Rep6 915.4120166829099 915.41090993586 30.681 2 0.18752734053127518 0.0006801564359802754 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 26216 13098 FHVEPGLQRL True PC9_epitope_Rep2 1194.6509415086598 1194.6493049037902 55.658 3 0.18752348191189117 0.0006801564359802754 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 42665 8361 IEVFPTKSA True H1975_Epitope_Rep2 990.5385970950199 990.53750993586 37.113 2 0.1875215544761878 0.0006801564359802754 0.9438714419765777 ['ENST00000458502.2_1_17:20744565-20744838:+|nuORF', 'nc|ENSG00000129968|Q96GS6-4|ABHD17A', 'ENST00000588598.5_1_19:1879918-1881565:-|nuORF', 'nc|ENSG00000129968|Q96GS6-3|ABHD17A', 'ENSG00000129968|ENST00000292577|ABHD17A', 'nc|ENSG00000129968|Q96GS6-2|ABHD17A'] 17500 21505 EHIGIGLLSL True PC9_epitope_Rep2 1050.60734536118 1050.6062499358602 88.187 2 0.18752054985223107 0.0006801564359802754 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 126361 12218 VPLAIVNKA True PC9_epitope_Rep3 923.58040233735 923.57930993586 52.027 2 0.18751485952539712 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 113523 9271 TQTAVITRI True PC9_epitope_Rep6 1001.5869442697699 1001.58584993586 45.815 2 0.1875089829236941 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 8494 4689 ATVETTIAR True NCI_RA007_Epitope_Rep5 960.52400966004 960.52290993586 24.723 2 0.18750740700542745 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 62217 18273 LLPSRQFGF True PC9_epitope_Rep2 1063.5814649665099 1063.58036993586 75.608 2 0.18750029024682557 0.0006801564359802754 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 60151 19674 LHYGLPVVV True PC9_epitope_Rep2 995.5804023373499 995.57930993586 81.063 2 0.18749233885153022 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 14885 20604 DYIKFLRSI True PC9_epitope_Rep5 1153.64954452633 1153.64788490379 84.302 3 0.18749081517493105 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 120103 12318 VFIDKQTNL True PC9_epitope_Rep2 1076.5866099166 1076.58550993586 52.693 2 0.18748567895776172 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 94991 15228 RYQDIIHSI True PC9_epitope_Rep1 1143.6036569630699 1143.6020249037902 63.395 3 0.18748345542849149 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 113999 17837 TRLPIDVQL True PC9_epitope_Rep6 1053.61824439805 1053.6171499358602 81.239 2 0.18748068371570736 0.0006801564359802754 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 62756 13845 LMAEMGVHSV True PC9_epitope_Rep5 1072.50453716876 1072.5034299358601 58.275 2 0.18747779595127156 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'ENST00000358711.7_1_20:62571331-62572425:-|nuORF'] 67359 7661 LTDRGVMSY True H1975_Epitope_Rep1 1040.49608066004 1040.49498993586 34.443 2 0.18747152546577617 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 11911 19838 DHSFSLEL True PC9_epitope_Rep2 946.4396113297399 946.43850993586 81.698 2 0.1874663063987811 0.0006801564359802754 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 105246 5427 STSNSFNLK True NCI_RA007_Epitope_Rep5 996.48762415132 996.48652993586 27.562 2 0.18746584614981301 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 62128 19074 LLPDLIQKV True PC9_epitope_Rep4 1037.6484818971699 1037.64738993586 81.459 2 0.18746276956439495 0.0006801564359802754 0.9438714419765777 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF'] 126627 6417 VPQEAQKIQA True PC9_epitope_Rep5 1110.6033226098998 1110.6022299358601 29.66 2 0.1874620646598959 0.0006801564359802754 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN'] 82127 13216 PTDEITVYY True H1975_Epitope_Rep2 1099.50735653639 1099.50677496793 55.963 1 0.18746065962740088 0.0006801564359802754 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000474340.1_1_9:95003027-95004705:-|nuORF'] 73261 7116 NEIDTTPPP True H1975_Epitope_Rep3 982.46074069714 982.4596499358599 32.342 2 0.18745775147136942 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 88365 6272 QYNPHVHQL True PC9_epitope_Rep1 1134.55704112382 1134.55540490379 28.939 3 0.18745565840666556 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 74654 8449 NLGGGVVTIER True H1975_Epitope_Rep1 1113.61422164677 1113.6131299358601 37.427 2 0.1874465912789651 0.0006801564359802754 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 42273 9875 IEIETPEQA True H1975_Epitope_Rep2 1028.5026055091198 1028.5015099358602 42.972 2 0.18743483985858483 0.0006801564359802754 0.9438714419765777 ['ENSG00000154767|ENST00000285021|XPC', 'ENST00000455144.6_1_3:14206267-14209863:-|nuORF'] 1899 13455 AEILELAGNAA True H1975_Epitope_Rep3 1070.5607890915799 1070.5596899358602 57.028 2 0.18743067829099322 0.0006801564359802754 0.9438714419765777 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 89507 13508 REQQLISAVFP True H1975_Epitope_Rep3 1286.6982856238997 1286.69718993586 57.235 2 0.18742835615112446 0.0006801564359802754 0.9438714419765777 ['ENST00000577961.5_1_18:756649-756733:-|nuORF', 'ENST00000418510.1_1_22:26043331-26044389:+|nuORF'] 139660 9221 YTSYPM[Oxidation]HDFY True H1975_Epitope_Rep1 1338.5226897111402 1338.5215899358602 40.378 2 0.18742365208065698 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 39781 19753 HQDNNFLYL True PC9_epitope_Rep1 1162.54072235334 1162.5396299358601 80.807 2 0.18742201693485458 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 115093 20656 TTVDHFWGL True PC9_epitope_Rep1 1074.51344497634 1074.5123499358601 84.275 2 0.18741389439839246 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.P444Afs*17|1|0.44|ENSG00000164828|chr7:853570-853571|-/G|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 75417 14317 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.5279899358602 62.973 2 0.18740652443666606 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 91877 11368 RPNSLVGITSA True PC9_epitope_Rep2 1113.61422164677 1113.6131299358601 49.048 2 0.18740219048851453 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 23809 14488 EYLERAPEL True PC9_epitope_Rep2 1118.5607890915799 1118.5596899358602 60.998 2 0.18739598535804028 0.0006801564359802754 0.9438714419765777 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 137330 22069 YLIPDIDLKL True PC9_epitope_Rep5 1201.69582601241 1201.69472993586 89.916 2 0.18739058776962336 0.0006801564359802754 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 139355 8831 YTDSYTDTY True H1975_Epitope_Rep3 1127.42950013851 1127.42897496793 38.975 1 0.1873884278962484 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 102589 18565 SQANRLFYL True PC9_epitope_Rep2 1110.5821932425 1110.58108993586 76.762 2 0.1873822155534498 0.0006801564359802754 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 120157 11982 VFLENVIR True H1975_Epitope_Rep2 988.5705659296399 988.56946993586 51.169 2 0.18738011035576627 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 120706 7452 VGARIYHTI True PC9_epitope_Rep2 1028.5767139392399 1028.57560993586 34.039 2 0.18736909984556527 0.0006801564359802754 0.9438714419765777 ['ENSG00000008394|ENST00000396210|MGST1', 'ENST00000539708.5_1_12:16513351-16516972:+|nuORF'] 96315 5867 SEEVPGTSP True H1975_Epitope_Rep2 901.4028914678499 901.40234496793 27.553 1 0.18736607844799716 0.0006801564359802754 0.9438714419765777 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 96356 10800 SEFTKIITP True NCI_RA007_Epitope_Rep5 1034.5648118428599 1034.56370993586 48.176 2 0.18736272774994686 0.0006801564359802754 0.9438714419765777 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 53443 14327 KVIDEIYRV True PC9_epitope_Rep5 1133.64445914589 1133.6433699358602 60.11 2 0.18736237235390868 0.0006801564359802754 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 44981 17084 IQIMKVEEI True PC9_epitope_Rep4 1101.61038213629 1101.60928993586 73.71 2 0.18735353359350393 0.0006801564359802754 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 15945 8250 EDTEEYNLR True PC9_epitope_Rep5 1167.5043964142699 1167.50328993586 36.675 2 0.18734969554242675 0.0006801564359802754 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 65311 9983 LSELEAALQR True H1975_Epitope_Rep1 1128.6138872935999 1128.61278993586 43.334 2 0.18734632897659906 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 133109 11680 WAVPQPTRL True H1975_Epitope_Rep2 1066.59236400338 1066.59126993586 49.999 2 0.18733759077043619 0.0006801564359802754 0.9438714419765777 ['ITSN2|p.G507Afs*55|1|0.21|ENSG00000198399|chr2:24295779-24295779|C/-|frameshift_variant', 'nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2'] 131094 4858 VVMENVGQQK True NCI_RA007_Epitope_Rep4 1130.5753936098997 1130.5742899358602 25.133 2 0.18733082137993295 0.0006801564359802754 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 21251 6594 ERIDTRNEL True PC9_epitope_Rep5 1144.58364979448 1144.5820049037902 30.334 3 0.18732997761624684 0.0006801564359802754 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 69891 20373 LYCGKTLLF True PC9_epitope_Rep5 1056.56778904832 1056.56668993586 83.399 2 0.1873234445581369 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP'] 104901 10739 STFNVFVGK True NCI_RA007_Epitope_Rep5 997.5232813840498 997.52218993586 47.945 2 0.1873143177885619 0.0006801564359802754 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'FKBP9|p.N129Ifs*10|1|0.39|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 73804 11167 NHDTGEYVL True PC9_epitope_Rep1 1046.46688870674 1046.46637496793 47.839 1 0.18731226306242613 0.0006801564359802754 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 114038 10314 TRMSTVSEL True PC9_epitope_Rep5 1022.5066453437399 1022.5055499358599 44.658 2 0.18730978022125783 0.0006801564359802754 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 29815 19762 FVVDEVHLI True PC9_epitope_Rep4 1069.5807962601698 1069.5796899358602 84.138 2 0.18730289347085327 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 137974 6542 YQAEAREAL True PC9_epitope_Rep4 1049.5141732523298 1049.5130699358601 32.291 2 0.18730047274141232 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 44974 10811 IQHSEFEEV True PC9_epitope_Rep1 1116.50875351872 1116.5076499358602 46.472 2 0.18729965681052232 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1', 'ENSG00000108175|ENST00000334512|ZMIZ1'] 44704 23106 IPNSIMTILEA True PC9_epitope_Rep5 1200.6424105405601 1200.6413099358601 93.864 2 0.18729958012627262 0.0006801564359802754 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 60271 7173 LIEGSINSVR True H1975_Epitope_Rep1 1086.6033226099 1086.6022299358601 32.612 2 0.187299535561846 0.0006801564359802754 0.9438714419765777 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'nc|ENSG00000241553|P59998-2|ARPC4'] 71941 19037 MPTLPPPSV True PC9_epitope_Rep2 937.49428975489 937.49318993586 78.591 2 0.187293901682142 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 132439 16535 VYNPVRAEW True PC9_epitope_Rep1 1132.5665431783598 1132.5654499358602 68.424 2 0.18729312903881912 0.0006801564359802754 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6'] 89401 5697 REMPVKVEA True NCI_RA007_Epitope_Rep2 1057.5590152697698 1057.5579099358602 26.775 2 0.18729059987286187 0.0006801564359802754 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 35594 10640 GTITTFEHA True PC9_epitope_Rep3 975.4661604307499 975.46506993586 45.875 2 0.1872896386738306 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 40421 9659 HRYGDSEFTV True PC9_epitope_Rep2 1209.54145062933 1209.5403499358601 42.492 2 0.1872867882582562 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 63104 6765 LNNELLAK True NCI_RA007_Epitope_Rep1 913.5232813840499 913.52218993586 30.323 2 0.18728090845793 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 96748 9266 SEQLDLPVRQA True H1975_Epitope_Rep1 1254.65681473474 1254.6557099358602 40.553 2 0.18727806654538323 0.0006801564359802754 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF'] 113512 10360 TQTAVITRI True PC9_epitope_Rep2 1001.5869442697699 1001.58584993586 45.175 2 0.18726791375796245 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 103064 11911 SQLEEGKPGYL True PC9_epitope_Rep5 1219.6084675599898 1219.60736993586 50.813 2 0.18726567476659814 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 9903 21360 AYPEYLITY True PC9_epitope_Rep3 1131.54882742555 1131.5477299358602 87.459 2 0.1872624338715191 0.0006801564359802754 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 75880 18863 NRDPILVSL True PC9_epitope_Rep3 1025.58694426977 1025.58584993586 77.78 2 0.1872564598768251 0.0006801564359802754 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 76657 22959 NTIPLFVQL True PC9_epitope_Rep3 1043.60153170475 1043.6004299358601 93.576 2 0.187254908071403 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'JUP|p.R582Q|1|0.15|ENSG00000173801|chr17:41758427-41758427|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 32073 7149 GEWERAAAV True NCI_RA007_Epitope_Rep3 987.4773938207898 987.47628993586 35.238 2 0.18724461037907547 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS', 'ENST00000493227.1_1_7:7622738-7646720:+|nuORF'] 87637 5791 QTYVGITEK True NCI_RA007_Epitope_Rep3 1037.5393253710097 1037.53822993586 29.756 2 0.18724090603070132 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 127958 11602 VRPPVQVY True PC9_epitope_Rep5 956.5443511817998 956.54324993586 49.624 2 0.18723964186715183 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 116795 16083 TYLPTSPLL True NCI_RA007_Epitope_Rep5 1003.55899818643 1003.55847496793 68.593 1 0.1872376889183295 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 32892 21488 GIMDRFLQV True PC9_epitope_Rep1 1077.5641006502099 1077.56300993586 87.497 2 0.18723246520356124 0.0006801564359802754 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 83078 20784 PYMDSPQSIGF True PC9_epitope_Rep2 1240.5434247752798 1240.5423299358602 85.389 2 0.18723024850171915 0.0006801564359802754 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 25180 10720 FDVSGYPTLK True H1975_Epitope_Rep3 1125.57062549929 1125.5695299358601 46.311 2 0.18722900275816917 0.0006801564359802754 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 131825 21988 VYAPPVGGFSF True PC9_epitope_Rep5 1139.56514619603 1139.56404993586 89.605 2 0.18722722161924354 0.0006801564359802754 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 99908 23169 SLIADLEQL True PC9_epitope_Rep1 1000.5440763982799 1000.54357496793 93.914 1 0.18722686373557465 0.0006801564359802754 0.9438714419765777 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 49482 10084 KIYEGQVEV True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 46.46 2 0.18722423643016614 0.0006801564359802754 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 71288 15324 MHAETAFESL True PC9_epitope_Rep2 1134.5015599633 1134.50046993586 64.225 2 0.1872233792527407 0.0006801564359802754 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 6748 21604 AQEDYLFSV True PC9_epitope_Rep1 1070.49204082542 1070.49094993586 87.923 2 0.18722222503508504 0.0006801564359802754 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 113677 13492 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61225490379 63.6 3 0.18721660761764788 0.0006801564359802754 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 125721 9192 VNELTEFAK True NCI_RA007_Epitope_Rep2 1049.53932537101 1049.53822993586 40.362 2 0.18721657376460826 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 94732 14685 RYLGKVLEL True PC9_epitope_Rep2 1089.65462990677 1089.6535299358602 61.749 2 0.1872162205257692 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000573641.1_1_17:2598433-2598937:-|nuORF'] 78967 15455 PFHTSTEMF True PC9_epitope_Rep1 1095.46953155903 1095.46842993586 64.269 2 0.1872153841400193 0.0006801564359802754 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'CAMTA1-DHRS3|1|fusion'] 8974 12553 AVHDSFVAV True PC9_epitope_Rep5 943.4763311916299 943.4752299358599 53.285 2 0.18720845331502137 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 43399 12026 IHSENFQTL True PC9_epitope_Rep5 1087.5298233164701 1087.5287299358602 51.252 2 0.18719943455833124 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 45101 17446 IQSDKFLNL True PC9_epitope_Rep2 1076.5866099166 1076.58550993586 72.359 2 0.1871985409952212 0.0006801564359802754 0.9438714419765777 ['ENSG00000136052|ENST00000258538|SLC41A2'] 29290 20493 FVDPAQITM True PC9_epitope_Rep2 1020.49501803088 1020.49392993586 84.257 2 0.1871903355169615 0.0006801564359802754 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 27806 9888 FQESSVKEL True PC9_epitope_Rep2 1065.5342399905699 1065.5331499358601 43.367 2 0.18718586401205597 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 21592 4278 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 23.477 2 0.1871824231784518 0.0006801564359802754 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 116665 17108 TYIPVPAKI True PC9_epitope_Rep3 1000.5957180483199 1000.59462993586 70.958 2 0.187181938223174 0.0006801564359802754 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 113850 14415 TREGGSIPVTL True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 60.271 2 0.18717180494771532 0.0006801564359802754 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 24350 12621 FADQEVRSL True PC9_epitope_Rep3 1063.52982331647 1063.5287299358602 53.57 2 0.18716935330993398 0.0006801564359802754 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 40538 14604 HSQFLGYPITL True H1975_Epitope_Rep3 1274.6659228664598 1274.66482993586 61.543 2 0.1871613283001136 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 84865 10876 QHQSGIVQL True PC9_epitope_Rep1 1008.5352430500798 1008.53414993586 46.719 2 0.18716125715900653 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 8726 11958 AVDPRFLAY True H1975_Epitope_Rep1 1050.5498304850598 1050.5487299358601 51.002 2 0.18715130639450828 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 24645 9688 FASHVSPEV True PC9_epitope_Rep3 971.47124581119 971.47014993586 42.212 2 0.18714853103876067 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 93940 12574 RVLGENAIAV True PC9_epitope_Rep4 1040.5978433066398 1040.59674993586 56.191 2 0.18714259272695544 0.0006801564359802754 0.9438714419765777 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 107011 16800 SYLKQLPHF True PC9_epitope_Rep5 1131.6076797143498 1131.60604490379 69.629 3 0.1871266772580921 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 86615 8429 QRDQQLEAL True PC9_epitope_Rep4 1099.5621860739097 1099.56108993586 39.886 2 0.1871259441550364 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000090615|Q08378-2|GOLGA3', 'nc|ENSG00000090615|Q08378-4|GOLGA3', 'ENSG00000090615|ENST00000450791|GOLGA3'] 136361 7257 YHDEADQSAL True PC9_epitope_Rep5 1147.47818166643 1147.47708993586 32.878 2 0.18711639004571307 0.0006801564359802754 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 70509 18467 LYTEKFEEF True PC9_epitope_Rep1 1204.5652057656796 1204.5641099358602 75.825 2 0.1871151350561843 0.0006801564359802754 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 11544 10007 DGNASGTTLLE True H1975_Epitope_Rep1 1076.49858275784 1076.4974899358601 43.429 2 0.18710975954582296 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5'] 89310 8945 RELVKNWVP True H1975_Epitope_Rep2 1139.64512785223 1139.64402993586 39.365 2 0.18710921581503306 0.0006801564359802754 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 99993 22170 SLITGQDLLSV True PC9_epitope_Rep1 1144.63395403184 1144.6328499358601 90.094 2 0.18709690560504705 0.0006801564359802754 0.9438714419765777 ['ENSG00000100625|ENST00000216513|SIX4'] 94356 16179 RYALQLQQI True PC9_epitope_Rep4 1131.64004247179 1131.6389499358602 70.177 2 0.18709337445833302 0.0006801564359802754 0.9438714419765777 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant'] 17272 20829 EHDAFIFAL True PC9_epitope_Rep4 1061.51819600361 1061.5170899358602 88.269 2 0.18709259579401763 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 83864 8081 QEHITTVVV True H1975_Epitope_Rep3 1024.5553097883198 1024.5542099358602 36.057 2 0.18709128434584024 0.0006801564359802754 0.9438714419765777 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000479285.5_1_1:114438859-114442862:-|nuORF'] 139200 19178 YSVDRLYEL True PC9_epitope_Rep2 1156.5764391557198 1156.57534993586 79.142 2 0.18708980075049242 0.0006801564359802754 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 72253 20126 MRYVASYLLA True PC9_epitope_Rep3 1185.6216155263298 1185.6205099358601 82.668 2 0.1870895848144181 0.0006801564359802754 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 92119 8531 RPYQPLPEA True PC9_epitope_Rep6 1069.55564414149 1069.5545499358602 42.561 2 0.18708394618700688 0.0006801564359802754 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 52623 20578 KQDLVELYL True PC9_epitope_Rep5 1119.6175756917098 1119.61646993586 84.2 2 0.18707612261921314 0.0006801564359802754 0.9438714419765777 ['ENSG00000160445|ENST00000291900|ZER1'] 47403 15515 IYIKHPHLF True PC9_epitope_Rep3 1166.66004964038 1166.6584049037901 64.83 3 0.18706868220100076 0.0006801564359802754 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 40616 10727 HTEPLDELY True H1975_Epitope_Rep2 1115.51350454599 1115.5124099358602 46.288 2 0.18706398614165912 0.0006801564359802754 0.9438714419765777 ['ENST00000522601.5_1_8:8086126-8093767:+|nuORF', 'ENST00000528684.5_1_11:67565540-67568567:-|nuORF', 'ENST00000478302.1_1_7:6976193-6979213:-|nuORF', 'ENST00000585436.5_1_16:5139172-5145393:-|nuORF', 'ENST00000526393.5_1_11:71502805-71507278:+|nuORF', 'ENST00000585975.5_1_16:5140431-5147740:-|nuORF', 'nc|ENSG00000290994|A6NEL3|FAM86C2P', 'nc|ENSG00000158483|Q9NVL1|FAM86C1P', 'ENST00000510506.5_1_4:3945015-3952874:-|nuORF', 'ENST00000340703.5_1_4:9694764-9704575:+|nuORF', 'ENSG00000118894|ENST00000427587|EEF2KMT'] 88793 9013 RDQIVTVSV True H1975_Epitope_Rep1 1015.56620882519 1015.56510993586 39.573 2 0.18706361372946406 0.0006801564359802754 0.9438714419765777 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 125151 18301 VLPSVLNKF True PC9_epitope_Rep4 1015.60661708519 1015.60552993586 78.463 2 0.18706236037032326 0.0006801564359802754 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 34789 11991 GQTGKLMYV True PC9_epitope_Rep5 995.51100244819 995.50990993586 51.119 2 0.18706162077659524 0.0006801564359802754 0.9438714419765777 ['ENSG00000124641|ENST00000265350|MED20', 'nc|ENSG00000288721|Q9H944-2|MED20'] 45711 18645 ISLPKGVVEV True PC9_epitope_Rep1 1039.62774645259 1039.62664993586 76.507 2 0.18705796318847062 0.0006801564359802754 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 135851 5618 YEQNDRLTP True H1975_Epitope_Rep2 1134.53055159246 1134.5294499358602 26.609 2 0.18705753681669332 0.0006801564359802754 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 103148 13336 SQMSPGDLAKV True PC9_epitope_Rep5 1131.5594091925898 1131.55830993586 56.31 2 0.18705358891066728 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148356|Q6UWE0-2|LRSAM1', 'ENSG00000148356|ENST00000300417|LRSAM1', 'nc|ENSG00000148356|Q6UWE0-3|LRSAM1', 'ENST00000483302.5_1_9:130248105-130265175:+|nuORF'] 96431 13841 SEIEVTPSVL True H1975_Epitope_Rep2 1072.56520576568 1072.5641099358602 58.386 2 0.18705270727721535 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3', 'PARD3|p.D968Ifs*11|1|0.15|ENSG00000148498|chr10:34317279-34317279|C/-|frameshift_variant', 'nc|ENSG00000148498|Q8TEW0-9|PARD3', 'nc|ENSG00000148498|Q8TEW0-10|PARD3', 'nc|ENSG00000148498|Q8TEW0-8|PARD3', 'PARD3|p.G1039Vfs*3|1|0.31|ENSG00000148498|chr10:34284204-34284204|C/-|frameshift_variant', 'PARD3|p.I1043Nfs*29|1|0.13|ENSG00000148498|chr10:34284192-34284193|-/T|frameshift_variant', 'PARD3|p.A498Gfs*9|1|0.56|ENSG00000148498|chr10:34378013-34378014|-/C|frameshift_variant'] 61851 21696 LLLDVPTAAV True PC9_epitope_Rep5 1010.6011973515799 1010.60010993586 88.501 2 0.18704315229087035 0.0006801564359802754 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 3477 10114 [Acetylation]-AGLNSLEAVKR True NCI_RA007_Epitope_Rep2 1198.66698581192 1198.6658899358602 43.929 2 0.18703278893366473 0.0006801564359802754 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 75392 5946 NQELQEINR True NCI_RA007_Epitope_Rep1 1142.5679997303398 1142.5669099358602 27.175 2 0.18703239565557625 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 61859 21714 LLLEILHEI True PC9_epitope_Rep4 1091.6590465808702 1091.6579499358602 91.72 2 0.18703117087113094 0.0006801564359802754 0.9438714419765777 ['ENSG00000197930|ENST00000395686|ERO1A', 'ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 136438 14533 YHGEVPVSL True PC9_epitope_Rep1 999.5025459394699 999.50144993586 60.726 2 0.18702932726111887 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 136418 16382 YHFPDQQEL True PC9_epitope_Rep1 1175.52473793603 1175.52364993586 67.835 2 0.1870292371294587 0.0006801564359802754 0.9438714419765777 ['ENSG00000165490|ENST00000533655|DDIAS'] 20701 12485 EQISDIDDAVR True PC9_epitope_Rep2 1259.59935942827 1259.5982699358601 53.333 2 0.18702833987282627 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 103429 23188 SQYPEIIFL True PC9_epitope_Rep5 1108.580461907 1108.57987496793 94.174 1 0.18702089852057588 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 26169 18340 FHQESAVWL True PC9_epitope_Rep5 1115.5399940773498 1115.5388899358602 75.559 2 0.18699473339518188 0.0006801564359802754 0.9438714419765777 ['ENST00000314423.11_1_16:69166475-69170710:+|nuORF'] 75450 9414 NQIDHEVTV True PC9_epitope_Rep5 1053.50908787189 1053.50798993586 41.166 2 0.18698118533705158 0.0006801564359802754 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 115258 11293 TVDGVVFHY True H1975_Epitope_Rep2 1035.50254593947 1035.5014499358601 48.485 2 0.18697867476106664 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'VCAN-CNTNAP3B|1|fusion'] 113628 15040 TRDAGYGGLSL True PC9_epitope_Rep5 1108.5512870370399 1108.55018993586 62.855 2 0.1869765647335781 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 3555 4851 AGNISDPGLQK True H1975_Epitope_Rep3 1098.5669371011797 1098.5658499358601 23.785 2 0.1869600057428236 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion'] 31655 6686 GEHSYTGIIHA True H1975_Epitope_Rep3 1183.56218607391 1183.56055490379 30.672 3 0.186957613723746 0.0006801564359802754 0.9438714419765777 ['ENSG00000122912|ENST00000609923|SLC25A16'] 64973 6801 LSDDHGASWRY True H1975_Epitope_Rep2 1305.5738133867699 1305.57217490379 31.078 3 0.18695694566389856 0.0006801564359802754 0.9438714419765777 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 49024 11341 KFIDTTSKF True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 48.628 2 0.1869549030592981 0.0006801564359802754 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 74546 10745 NLAENISRV True PC9_epitope_Rep6 1014.54580773378 1014.5447099358599 52.156 2 0.18695247848916446 0.0006801564359802754 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 39106 17976 HLDATKLLL True PC9_epitope_Rep1 1022.61243074162 1022.61132993586 73.937 2 0.1869500870194111 0.0006801564359802754 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 2015 7540 AELATRALP True H1975_Epitope_Rep2 940.5341804209199 940.53308993586 33.954 2 0.1869497162135629 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 72124 18243 MREDVAEGLTL True PC9_epitope_Rep3 1232.6070876609997 1232.6059899358602 75.383 2 0.18694963096393752 0.0006801564359802754 0.9438714419765777 ['ENST00000579248.5_2_18:47017953-47018809:-|nuORF'] 136595 15150 YHYDMNTASL True PC9_epitope_Rep5 1213.5073736197298 1213.50626993586 63.282 2 0.18694674772629125 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-15|NR3C1', 'nc|ENSG00000113580|P04150-14|NR3C1', 'nc|ENSG00000113580|P04150-5|NR3C1', 'nc|ENSG00000113580|P04150-13|NR3C1', 'nc|ENSG00000113580|P04150-12|NR3C1', 'nc|ENSG00000113580|P04150-11|NR3C1', 'nc|ENSG00000113580|P04150-8|NR3C1'] 73256 7113 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 32.292 2 0.18693140374270925 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 123787 6303 VITEEEKNFK True PC9_epitope_Rep5 1235.63976768827 1235.63812490379 29.219 3 0.18692832750766236 0.0006801564359802754 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000570149.1_1_16:89628679-89629447:+|nuORF'] 7094 5544 AQYEDIANR True NCI_RA007_Epitope_Rep5 1078.5043368446197 1078.5032299358602 28.012 2 0.1869224273003713 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 47389 12616 IYIGGQEHF True PC9_epitope_Rep6 1062.5134449763398 1062.5123499358601 59.985 2 0.18692141393765996 0.0006801564359802754 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 26674 9383 FLDANVKESY True H1975_Epitope_Rep3 1184.57135377528 1184.5702499358601 41.093 2 0.18692114577310856 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000289758|Q92902-4|HPS1', 'ENSG00000107521|ENST00000361490|HPS1', 'nc|ENSG00000289758|Q92902-2|HPS1'] 28024 19239 FRADDTFEAL True PC9_epitope_Rep3 1183.55095268387 1183.54984993586 79.223 2 0.18691842132456574 0.0006801564359802754 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 28371 14029 FSDLYNEVY True H1975_Epitope_Rep3 1148.50260550912 1148.50207496793 59.284 1 0.18690152864159038 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 131933 17506 VYEYVVERF True PC9_epitope_Rep4 1202.5971746002995 1202.5960699358602 75.341 2 0.18690111477517352 0.0006801564359802754 0.9438714419765777 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 28459 13574 FSEQGINEFLR True NCI_RA007_Epitope_Rep1 1338.6568147347398 1338.6557099358602 56.809 2 0.18690039453036789 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 1045 5611 AEAIHSPQV True H1975_Epitope_Rep3 950.4821448480601 950.48104993586 26.619 2 0.1868949217242512 0.0006801564359802754 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.G2160D|1|0.36|ENSG00000047410|chr1:186320401-186320401|C/T|missense_variant'] 140398 18811 YYEYNHDLF True PC9_epitope_Rep5 1262.5244035828598 1262.5233099358602 77.369 2 0.18689309445628083 0.0006801564359802754 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 127476 7879 VQTEVNREL True PC9_epitope_Rep3 1086.56693710118 1086.5658499358601 35.291 2 0.18688600593124588 0.0006801564359802754 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 129413 5833 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.5229699358601 27.457 2 0.18688379367147503 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 35171 15138 GSDEPAFMYY True H1975_Epitope_Rep1 1178.45902644498 1178.4579299358602 63.485 2 0.18687995595393142 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 85502 19843 QLIKELPEL True PC9_epitope_Rep5 1081.63831113629 1081.63720993586 81.373 2 0.18687250248875006 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 19394 8173 ELPDPQESIQR True H1975_Epitope_Rep3 1310.64664397386 1310.6455499358601 36.417 2 0.18687211235614964 0.0006801564359802754 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 138973 10420 YSETATAIAY True H1975_Epitope_Rep2 1088.5026055091198 1088.5015099358602 45.093 2 0.18686935253694417 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 83318 13588 QALLDLHAL True NCI_RA007_Epitope_Rep3 992.5654805492001 992.56438993586 60.746 2 0.18686401768261743 0.0006801564359802754 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 87416 7665 QTDTLQNDY True H1975_Epitope_Rep3 1096.4672826295598 1096.46618993586 34.465 2 0.18686040400984413 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 13338 8353 DM[Oxidation]GFEPQIR True H1975_Epitope_Rep1 1107.5018946969099 1107.5007899358602 37.059 2 0.18685964429566107 0.0006801564359802754 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 21471 5452 ERQPGAASL True PC9_epitope_Rep1 927.4773938207899 927.47628993586 25.805 2 0.18685925011193877 0.0006801564359802754 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 113625 13755 TRDAGYGGLSL True PC9_epitope_Rep4 1108.5512870370399 1108.55018993586 60.804 2 0.18685878611494214 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 76037 16847 NRLDSIDPAL True PC9_epitope_Rep5 1112.5825871653199 1112.5814899358602 69.811 2 0.18683148743869504 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124359502-124368686:-|nuORF', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 53950 21039 KYITDWQNVF True PC9_epitope_Rep1 1312.6451874218799 1312.6440899358602 85.756 2 0.1868221865085677 0.0006801564359802754 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 1468 14996 AEELRLLLP True H1975_Epitope_Rep2 1052.62299542532 1052.62188993586 62.834 2 0.18681897180333806 0.0006801564359802754 0.9438714419765777 ['ENST00000566833.1_1_15:43477651-43481519:+|nuORF', 'ENST00000564630.5_1_15:43477651-43478217:+|nuORF', 'nc|ENSG00000166946|O95273-2|CCNDBP1', 'ENSG00000166946|ENST00000300213|CCNDBP1'] 69910 13034 LYDIDVAK True PC9_epitope_Rep1 935.49639792987 935.49530993586 55.004 2 0.18681864272400517 0.0006801564359802754 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 7281 21550 ARPPWMWVL True PC9_epitope_Rep4 1154.60590589254 1154.6048099358602 91.073 2 0.1868167558546947 0.0006801564359802754 0.9438714419765777 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 75980 13896 NRHYYSITI True PC9_epitope_Rep5 1165.58800689893 1165.5869099358601 58.471 2 0.18681463839515816 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 27412 15390 FNDTFVHV True PC9_epitope_Rep4 977.4606811274899 977.45958993586 67.13 2 0.18681380550029408 0.0006801564359802754 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 75819 16553 NRDELELEL True PC9_epitope_Rep6 1129.5615173675699 1129.5604299358602 76.111 2 0.18680485352173112 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 40481 5864 HSEAHTLLY True H1975_Epitope_Rep2 1069.51925863277 1069.5181699358602 27.541 2 0.1868038532576418 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Cfs*12|1|0.2|ENSG00000068024|chr2:239053582-239053591|CAGGCAGCGC/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF', 'ENST00000460235.1_1_2:240024358-240029778:-|nuORF', 'ENST00000535493.5_1_2:240016681-240219867:-|nuORF', 'ENST00000493582.5_1_2:240016681-240274403:-|nuORF', 'ENST00000463007.5_1_2:240011659-240219867:-|nuORF'] 41970 9818 IEDFEARIA True H1975_Epitope_Rep1 1062.53457434374 1062.53346993586 42.693 2 0.18679695391277326 0.0006801564359802754 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 12640 9301 DLEGLSQR True PC9_epitope_Rep3 916.46140940348 916.46030993586 40.716 2 0.18677084439939023 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 16917 2686 EGDKHTLSKK True NCI_RA007_Epitope_Rep2 1141.6091362663299 1141.60802993586 14.672 2 0.18676671888992682 0.0006801564359802754 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6', 'ENST00000462951.2_1_1:153507620-153508442:-|nuORF'] 113848 15561 TREGETIIEL True PC9_epitope_Rep4 1159.6084675599898 1159.60736993586 67.777 2 0.18676518766276684 0.0006801564359802754 0.9438714419765777 ['CD47|p.V146Cfs*18|1|0.19|ENSG00000196776|chr3:108071147-108071148|-/A|frameshift_variant', 'nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47'] 73967 14122 NHNIYITEV True PC9_epitope_Rep1 1101.54547338061 1101.54436993586 59.147 2 0.18676111011154972 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'AMBRA1|p.W132Cfs*22|1|0.22|ENSG00000110497|chr11:46545759-46545759|C/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 105579 6529 SVEAAAELSAK True NCI_RA007_Epitope_Rep1 1074.55570371114 1074.55460993586 29.41 2 0.18675980130372338 0.0006801564359802754 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 106057 10450 SVLSPLLNK True NCI_RA007_Epitope_Rep3 969.5858816406101 969.58478993586 48.168 2 0.18674980881053765 0.0006801564359802754 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 108310 6804 TEDFSNPSA True H1975_Epitope_Rep3 966.3930550601399 966.3925049679301 31.124 1 0.18674624007196994 0.0006801564359802754 0.9438714419765777 ['ENSG00000166024|ENST00000298999|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2|R3HCC1L'] 74118 12881 NHVTPPNVSL True PC9_epitope_Rep3 1076.56145779792 1076.56036993586 54.563 2 0.18674166995551586 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 54148 13858 KYNDNFFGL True NCI_RA007_Epitope_Rep3 1116.5240096600398 1116.52290993586 61.837 2 0.18674062856645673 0.0006801564359802754 0.9438714419765777 ['ENSG00000012963|ENST00000013070|UBR7'] 74759 21737 NLLQVLEKV True PC9_epitope_Rep5 1054.63864548946 1054.63754993586 88.643 2 0.18673104714323238 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 25365 7495 FEHITAETP True H1975_Epitope_Rep2 1043.49237517859 1043.4912699358601 33.779 2 0.1867284472319758 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000128487|Q5M775-5|SPECC1', 'nc|ENSG00000128487|Q5M775-3|SPECC1', 'nc|ENSG00000128487|Q5M775-2|SPECC1', 'nc|ENSG00000128487|Q5M775-4|SPECC1', 'ENSG00000128487|ENST00000395527|SPECC1'] 109211 18726 TFTFSHATF True PC9_epitope_Rep1 1057.4868958753298 1057.48578993586 76.819 2 0.18672621681561077 0.0006801564359802754 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 116026 13288 TVRETVNVI True PC9_epitope_Rep5 1029.5818588893299 1029.5807699358602 56.123 2 0.18671573139108633 0.0006801564359802754 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101'] 28778 13948 FTDEEVDELY True H1975_Epitope_Rep1 1258.52412879934 1258.5230299358602 58.806 2 0.18670482338064026 0.0006801564359802754 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 21058 6806 ERDM[Oxidation]SNVSL True PC9_epitope_Rep3 1065.47607387189 1065.4749699358601 31.196 2 0.1867043735758392 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 37231 17722 GVVDPRAISVL True PC9_epitope_Rep6 1124.65535818276 1124.6542699358602 80.802 2 0.18670333542636977 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1'] 77556 12480 NYSNIRFQF True NCI_RA007_Epitope_Rep3 1187.57235683479 1187.5712499358601 56.315 2 0.1867001036342297 0.0006801564359802754 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 45130 10357 IQVTKVTQV True PC9_epitope_Rep1 1014.6073453611799 1014.60624993586 44.72 2 0.18669962829906003 0.0006801564359802754 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 114039 10411 TRMSTVSEL True PC9_epitope_Rep5 1022.5066453437399 1022.5055499358599 45.031 2 0.18669158012298556 0.0006801564359802754 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 85056 12743 QILEKDAVIKV True PC9_epitope_Rep2 1254.75473787086 1254.7531049037902 54.32 3 0.18669150234646908 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 43881 14503 ILDEVIM[Oxidation]GY True H1975_Epitope_Rep2 1067.5208988059899 1067.5198099358602 60.943 2 0.18667523739356073 0.0006801564359802754 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 76529 12812 NTDNLLTEY True H1975_Epitope_Rep3 1081.49276910141 1081.49166993586 54.5 2 0.18667166319265135 0.0006801564359802754 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF'] 89352 7451 REM[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1339.5714308087101 1339.5703299358602 33.663 2 0.1866639861897228 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 24374 7665 FAEHNDLQY True H1975_Epitope_Rep2 1135.4934378077498 1135.4923499358601 34.435 2 0.18664474905714037 0.0006801564359802754 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 18706 18949 ELDETKIIL True PC9_epitope_Rep5 1072.6015912743999 1072.6004899358602 77.911 2 0.1866441127482892 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6', 'ENST00000463014.1_1_7:44246980-44247830:+|nuORF'] 52500 11834 KPNPNQIISV True PC9_epitope_Rep2 1108.62405805448 1108.62296993586 50.849 2 0.18664270484956996 0.0006801564359802754 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 76504 11732 NTDIAENLY True H1975_Epitope_Rep2 1051.48220441771 1051.4816749679298 50.2 1 0.18663996347010567 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 140096 12057 YVPETVYRV True PC9_epitope_Rep6 1124.5866099165999 1124.58550993586 57.69 2 0.18663492467569387 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 95365 19728 [Acetylation]-SAHLQWMVVR True PC9_epitope_Rep5 1267.64956192597 1267.64846993586 80.93 2 0.1866323528359381 0.0006801564359802754 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 71118 18477 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 76.672 2 0.18663162404641798 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 4577 9268 ALAAGGYDVEK True PC9_epitope_Rep3 1092.54513902744 1092.5440499358601 40.593 2 0.186625798540612 0.0006801564359802754 0.9438714419765777 ['ENSG00000184357|ENST00000331442|H1-5'] 71939 19356 MPTLPPPSV True PC9_epitope_Rep1 937.49428975489 937.49318993586 79.26 2 0.18662574569214646 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 93855 19532 RVFSDIIYTV True PC9_epitope_Rep4 1211.65502382959 1211.65392993586 83.251 2 0.186625243576701 0.0006801564359802754 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 129363 12203 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.5222499358601 52.021 2 0.18661471965900991 0.0006801564359802754 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 127360 10149 VQPSKYHFL True PC9_epitope_Rep2 1117.5920296502102 1117.59092993586 44.375 2 0.18661035552610078 0.0006801564359802754 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 77595 20013 NYTDIKDYL True PC9_epitope_Rep1 1143.54480467427 1143.54370993586 81.805 2 0.1866055173391058 0.0006801564359802754 0.9438714419765777 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 34971 5445 GQYGNPLNK True NCI_RA007_Epitope_Rep5 989.4930438849299 989.49194993586 27.632 2 0.18660353031795007 0.0006801564359802754 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 131900 16104 VYEGPELNHAF True PC9_epitope_Rep2 1274.59315184902 1274.5920499358601 67.201 2 0.1865986769159144 0.0006801564359802754 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant'] 138823 8145 YSDKYFDEHY True H1975_Epitope_Rep3 1365.55134660669 1365.5502499358602 36.307 2 0.18659280378570783 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 114216 7957 TRVQEEPEL True PC9_epitope_Rep4 1099.5509526838698 1099.54984993586 38.05 2 0.18656599450804304 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8'] 105097 17846 STLHLVLRL True PC9_epitope_Rep2 1050.65496425994 1050.65386993586 73.945 2 0.18656032747100337 0.0006801564359802754 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 116025 11859 TVRETVNVI True PC9_epitope_Rep4 1029.5818588893299 1029.5807699358602 53.392 2 0.18655913372042546 0.0006801564359802754 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101'] 13807 7198 DQVANSAFVER True NCI_RA007_Epitope_Rep4 1234.59421447818 1234.5931099358602 34.314 2 0.18655083100970357 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 43033 8977 IGGIGTVPVGR True NCI_RA007_Epitope_Rep1 1024.6029286870798 1024.60182993586 38.92 2 0.18654875983736383 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 130478 15132 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 70.27 2 0.18654540100991754 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 127036 20847 VPYLVGQVV True PC9_epitope_Rep3 972.5644179200399 972.56332993586 85.461 2 0.18654112702994208 0.0006801564359802754 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 140412 20558 YYFDSYAHF True PC9_epitope_Rep1 1211.4923751785898 1211.4912699358601 83.889 2 0.18653763433994966 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.E343Kfs*18|1|0.21|ENSG00000111218|chr12:3592277-3592277|G/-|frameshift_variant', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8'] 95066 18199 RYSGVNQSMLF True PC9_epitope_Rep1 1300.6234064314801 1300.6223099358601 74.792 2 0.18653167269908416 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'ENST00000519124.5_1_8:124382257-124392860:-|nuORF'] 83910 9743 QEISHLIEP True NCI_RA007_Epitope_Rep4 1064.55022440788 1064.54912993586 44.322 2 0.1865298112842374 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 117043 18097 TYQLGFHSI True PC9_epitope_Rep3 1064.52909504048 1064.5279899358602 74.807 2 0.18652816869953728 0.0006801564359802754 0.9438714419765777 ['ENSG00000142507|ENST00000270586|PSMB6'] 92138 8904 RQAPIPAEL True NCI_RA007_Epitope_Rep1 993.5607295219298 993.55962993586 38.634 2 0.18652769491756996 0.0006801564359802754 0.9438714419765777 ['ENSG00000169583|ENST00000494426|CLIC3'] 93718 5804 RTQGLMIMK True NCI_RA007_Epitope_Rep3 1076.5834561957997 1076.58234993586 29.807 2 0.1865073724912977 0.0006801564359802754 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1', 'nc|ENSG00000137275|Q13546-2|RIPK1'] 82158 14985 PTDYADIMM[Oxidation]GY True H1975_Epitope_Rep2 1291.51007642211 1291.50896993586 62.79 2 0.18650695135179565 0.0006801564359802754 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 33447 11428 GLGLDDALEPR True H1975_Epitope_Rep1 1154.59315184902 1154.5920499358601 48.938 2 0.18650630473313554 0.0006801564359802754 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'ENST00000594017.5_1_19:49497156-49513425:+|nuORF'] 6855 3608 AQIENSAAVQK True NCI_RA007_Epitope_Rep4 1157.6040508858898 1157.6029499358601 19.937 2 0.18649992361700798 0.0006801564359802754 0.9438714419765777 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 14815 16894 DYAYLREHF True PC9_epitope_Rep5 1212.5563724174797 1212.55526993586 69.995 2 0.18649897249661046 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 116693 15031 TYITSVSRL True PC9_epitope_Rep3 1038.57095985246 1038.5698699358602 62.944 2 0.18649660501196189 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 105158 7156 STMGYMMAK True NCI_RA007_Epitope_Rep3 1018.4285953471799 1018.42748993586 35.266 2 0.18649166800667638 0.0006801564359802754 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 21068 10719 ERDMSNVSL True PC9_epitope_Rep3 1049.48115887189 1049.48006993586 46.185 2 0.18648691676068924 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 103417 19810 SQYGEIVNI True PC9_epitope_Rep5 1021.5080252427299 1021.50692993586 81.247 2 0.18648008769256624 0.0006801564359802754 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 9555 21564 AYALLSHFL True PC9_epitope_Rep3 1033.5596668927699 1033.55856993586 88.241 2 0.18647355831961773 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 139391 7084 YTEEDAASY True H1975_Epitope_Rep1 1047.40328539067 1047.4021899358602 32.275 2 0.186473372874648 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 6645 10195 AQAAALYKV True PC9_epitope_Rep1 933.5283667644899 933.52726993586 44.093 2 0.1864682473505262 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'ENST00000483659.5_1_2:85622736-85628768:-|nuORF'] 107268 12206 SYQGKGFVM True PC9_epitope_Rep1 1015.4797023199098 1015.47860993586 51.808 2 0.18646753784933456 0.0006801564359802754 0.9438714419765777 ['ENSG00000130202|ENST00000252483|NECTIN2'] 74591 13592 NLDPLTETY True H1975_Epitope_Rep2 1064.50260550912 1064.5015099358602 57.418 2 0.18646435371682982 0.0006801564359802754 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 17433 12250 EHFPQAYSV True PC9_epitope_Rep4 1076.49270953176 1076.4916099358602 54.936 2 0.1864635509000662 0.0006801564359802754 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 88603 11538 RALPELTKL True PC9_epitope_Rep4 1039.6389798426299 1039.6378899358601 52.144 2 0.18646281124570244 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 74058 9909 NHSNQFTQL True PC9_epitope_Rep5 1087.50467119779 1087.50356993586 43.087 2 0.1864589330281398 0.0006801564359802754 0.9438714419765777 ['ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENSG00000132024|ENST00000318003|CC2D1A'] 52171 20340 KMDASLGNLFA True PC9_epitope_Rep1 1165.58014463717 1165.5790499358602 83.068 2 0.1864576791497117 0.0006801564359802754 0.9438714419765777 ['ENSG00000196937|ENST00000359943|FAM3C'] 102672 4813 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44466993586 23.383 2 0.18645232018251598 0.0006801564359802754 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 130468 17026 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 70.508 2 0.18645109148486408 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 96137 11514 SEDYPAALP True H1975_Epitope_Rep2 961.4392769765699 961.43816993586 49.346 2 0.18645043194253214 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 139330 5277 YTDSEPRATY True H1975_Epitope_Rep3 1201.52513185885 1201.5240299358602 25.38 2 0.18644496330666338 0.0006801564359802754 0.9438714419765777 ['ENSG00000158480|ENST00000289431|SPATA2'] 40673 4896 HTLNQIDSVK True NCI_RA007_Epitope_Rep1 1153.6091362663299 1153.60750490379 23.125 3 0.18643786177939695 0.0006801564359802754 0.9438714419765777 ['CON__P12763'] 113935 19820 TRIWQDVQL True PC9_epitope_Rep1 1157.6193070272097 1157.61820993586 81.052 2 0.18643455670999393 0.0006801564359802754 0.9438714419765777 ['ENSG00000004766|ENST00000305866|VPS50', 'VPS50|p.S583Vfs*7|1|0.23|ENSG00000004766|chr7:93308938-93308938|A/-|frameshift_variant', 'VPS50|p.K778Nfs*7|1|0.13|ENSG00000004766|chr7:93349900-93349900|G/-|frameshift_variant', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 94905 9847 RYPDRITLI True NCI_RA007_Epitope_Rep5 1145.65569253593 1145.65458993586 44.521 2 0.1864333006837915 0.0006801564359802754 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 48938 6244 KEYDVAVQA True H1975_Epitope_Rep2 1021.5080252427298 1021.50692993586 28.973 2 0.18643107884780685 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant'] 99914 23105 SLIADLEQL True PC9_epitope_Rep5 1000.5440763982799 1000.54357496793 93.86 1 0.18643028819251534 0.0006801564359802754 0.9438714419765777 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 135034 21242 YAIEVDPVL True PC9_epitope_Rep2 1017.5382627418498 1017.53767496793 87.166 1 0.18642986910250206 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF'] 26229 15592 FHYEADGANVL True PC9_epitope_Rep2 1234.5618517207397 1234.56074993586 65.25 2 0.18642442777702548 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 40390 15906 HRTEMDWVL True PC9_epitope_Rep4 1185.5600778989299 1185.55843490379 69.11 3 0.18641751297464898 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 19972 10043 EMEAELEDER True PC9_epitope_Rep3 1249.5132468458098 1249.5121499358602 43.586 2 0.18641438277961006 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 132286 20078 VYLDKFIRL True PC9_epitope_Rep5 1165.68593003505 1165.68482993586 82.28 2 0.18641212731416906 0.0006801564359802754 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 138934 13805 YSEEIVEMY True H1975_Epitope_Rep3 1161.4899922200898 1161.48947496793 58.406 1 0.18641078213855738 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 110079 20989 TIAEGLTLAQV True PC9_epitope_Rep1 1114.62338934814 1114.6222899358602 85.56 2 0.18640942133388147 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 75453 14038 NQIECHPYL True PC9_epitope_Rep5 1115.50697969691 1115.50588993586 59.012 2 0.1864034694672083 0.0006801564359802754 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'nc|ENSG00000165568|Q96JD6-4|AKR1E2', 'ENSG00000165568|ENST00000298375|AKR1E2'] 109886 14166 THNIIVNQL True PC9_epitope_Rep3 1050.5821932425 1050.58108993586 59.575 2 0.18639605542830678 0.0006801564359802754 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 127473 7883 VQTEVNREL True PC9_epitope_Rep1 1086.56693710118 1086.5658499358601 35.15 2 0.18639467848226732 0.0006801564359802754 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 33533 10765 GLIDHQTYL True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 46.369 2 0.18638655146337613 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 93618 8009 RTDDTPVVL True NCI_RA007_Epitope_Rep3 1014.5345743437399 1014.53346993586 38.599 2 0.1863858797109113 0.0006801564359802754 0.9438714419765777 ['ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1', 'nc|ENSG00000143622|Q92963-2|RIT1'] 1371 4685 AEEEPNRIPS True H1975_Epitope_Rep3 1140.54111627616 1140.54000993586 23.144 2 0.18638470924665712 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 57940 11735 LEQNIQLPAA True H1975_Epitope_Rep1 1095.59242357303 1095.59187496793 50.132 1 0.1863801057503059 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 86790 12423 QRNEVVVEL True PC9_epitope_Rep4 1084.58767254576 1084.58656993586 55.589 2 0.18637899855460474 0.0006801564359802754 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 34507 6979 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 34.088 2 0.18637718025732444 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 140231 19493 YWMHVQNTF True PC9_epitope_Rep3 1224.53861417836 1224.53750993586 80.211 2 0.18637099535234153 0.0006801564359802754 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 85144 14905 QITVNDLPVGR True PC9_epitope_Rep2 1210.6669854956199 1210.6658899358602 62.597 2 0.18636609642344884 0.0006801564359802754 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 96160 8320 SEEEISFRA True H1975_Epitope_Rep1 1066.49310345458 1066.49200993586 36.934 2 0.18636472759305675 0.0006801564359802754 0.9438714419765777 ['ENSG00000162928|ENST00000295030|PEX13'] 61858 22419 LLLEILHEI True PC9_epitope_Rep2 1091.6590465808702 1091.6579499358602 91.727 2 0.18636374255351512 0.0006801564359802754 0.9438714419765777 ['ENSG00000197930|ENST00000395686|ERO1A', 'ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 110734 7215 TKFETEQAL True NCI_RA007_Epitope_Rep4 1065.5342399905699 1065.5331499358601 34.386 2 0.18635432860790052 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'chr17:16843820-16844252|422|10.65|0.55|4.27|-|1|KRT17P1,KRT17P1|1', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 24723 11505 FAYDGKDYL True H1975_Epitope_Rep2 1090.4971262058598 1090.4960299358602 49.311 2 0.18635428352502056 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 18794 7552 ELDSNLYR True NCI_RA007_Epitope_Rep2 1008.48762415132 1008.48652993586 34.001 2 0.1863504053456281 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 72621 8166 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep4 1074.57433136118 1074.5732299358601 38.866 2 0.18634655447020226 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 29770 16515 FVSISDLLVPK True H1975_Epitope_Rep1 1216.7067250492798 1216.70562993586 68.898 2 0.1863391490131115 0.0006801564359802754 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 47622 14292 IYPELQIERF True NCI_RA007_Epitope_Rep5 1306.6921376142998 1306.69104993586 61.667 2 0.18633585758925886 0.0006801564359802754 0.9438714419765777 ['ENSG00000077420|ENST00000376236|APBB1IP', 'APBB1IP|p.F234L|1|0.35|ENSG00000077420|chr10:26513549-26513549|T/G|missense_variant'] 17556 14145 EHISSLIKL True PC9_epitope_Rep4 1038.6073453611798 1038.6062499358602 62.312 2 0.18632285667616053 0.0006801564359802754 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'chr17:32474824-32479851|119|15.35|0.28|5.76|+|0|PSMD11,PSMD11|1'] 90882 13715 RLASYLDKV True PC9_epitope_Rep1 1063.60259433391 1063.6014899358602 57.604 2 0.1863205336167411 0.0006801564359802754 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P05784', 'ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 104864 15270 STEQIPILY True H1975_Epitope_Rep2 1062.5597264624198 1062.55917496793 63.894 1 0.1863200303502887 0.0006801564359802754 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 7137 9791 AQYEHDLEV True PC9_epitope_Rep6 1102.4931034545798 1102.49200993586 48.11 2 0.18631757563474893 0.0006801564359802754 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 132826 17092 VYTHNLYYL True PC9_epitope_Rep2 1184.5866099165999 1184.58550993586 70.994 2 0.18631638835994316 0.0006801564359802754 0.9438714419765777 ['ENSG00000198954|ENST00000361983|KIFBP'] 132878 9821 VYTSKSDVW True PC9_epitope_Rep4 1083.52367530687 1083.52256993586 45.42 2 0.1863129461645035 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENSG00000153208|ENST00000295408|MERTK', 'TMEM87B-MERTK|2|fusion', 'TMEM87B-MERTK|3|fusion', 'TMEM87B-MERTK|1|fusion'] 2807 6017 AEVEPTPEA True H1975_Epitope_Rep3 941.4341915961298 941.43364496793 28.157 1 0.18631193234080504 0.0006801564359802754 0.9438714419765777 ['ENSG00000186834|ENST00000332499|HEXIM1'] 130997 17733 VVLEEIPKL True PC9_epitope_Rep6 1038.6324974798597 1038.6314099358601 80.843 2 0.1863104872938931 0.0006801564359802754 0.9438714419765777 ['ENSG00000116266|ENST00000370008|STXBP3'] 132209 9356 VYKDHQTITI True PC9_epitope_Rep5 1216.6451874218799 1216.6440899358602 40.943 2 0.18630908615628705 0.0006801564359802754 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 139257 8318 YTDATPLRV True H1975_Epitope_Rep3 1034.53965972418 1034.53856993586 36.978 2 0.1863075832985189 0.0006801564359802754 0.9438714419765777 ['ENSG00000185163|ENST00000397333|DDX51', 'ENST00000545991.1_1_12:132626393-132626546:-|nuORF', 'ENST00000546058.1_1_12:132626393-132626917:-|nuORF', 'ENST00000329073.8_1_12:132625785-132627411:-|nuORF'] 88877 6896 REAELLTSA True H1975_Epitope_Rep2 988.5189242795999 988.51782993586 31.445 2 0.18629065352713914 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156970|O60566-3|BUB1B', 'nc|ENSG00000156970|O60566-2|BUB1B', 'MARK2-BUB1B|1|fusion', 'ENSG00000156970|ENST00000287598|BUB1B'] 47584 11933 IYNGDMEKI True PC9_epitope_Rep5 1081.51139637101 1081.51028993586 50.897 2 0.186279572953363 0.0006801564359802754 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 113546 19301 TQVTALIKL True PC9_epitope_Rep1 985.61718176889 985.61608993586 79.046 2 0.18627362274032247 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 55434 15449 LATRALPEL True PC9_epitope_Rep1 982.5811306133398 982.58002993586 64.245 2 0.18627113972243553 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 29300 15264 FVDPLVTNY True H1975_Epitope_Rep3 1066.53351171458 1066.5324099358602 64.121 2 0.1862578934774215 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 46940 21339 IVLPEDLQL True PC9_epitope_Rep4 1038.5961119711399 1038.5950099358602 90.248 2 0.18625626613798885 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 46253 5614 ITDTTRDVY True H1975_Epitope_Rep2 1082.52440358286 1082.5233099358602 26.597 2 0.18625014178410543 0.0006801564359802754 0.9438714419765777 ['ENSG00000161904|ENST00000293760|LEMD2'] 129133 5517 VTDALNATR True PC9_epitope_Rep5 959.50360856863 959.50250993586 26.229 2 0.18624536342735531 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 11881 18231 DHNYQSYIL True PC9_epitope_Rep3 1151.52473793603 1151.52364993586 75.338 2 0.18624349568087922 0.0006801564359802754 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 56787 14401 LEATINELV True H1975_Epitope_Rep3 1000.5440763982799 1000.54296993586 60.747 2 0.1862414647402815 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 27005 21541 FLLGPRLVLA True PC9_epitope_Rep1 1097.6961007959299 1097.69500993586 87.68 2 0.1862240855700267 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 105519 12215 SVDGVIKEV True PC9_epitope_Rep2 944.51786165044 944.51676993586 52.298 2 0.1862213210044884 0.0006801564359802754 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 95907 9544 SDVEAIFSK True H1975_Epitope_Rep1 994.49712620586 994.4965749679301 41.635 1 0.18621445394427932 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 133057 13364 VYVVGTAHF True PC9_epitope_Rep6 991.5127167003499 991.51160993586 63.068 2 0.186204457474998 0.0006801564359802754 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 135929 9317 YEVRLTQTV True H1975_Epitope_Rep1 1107.59242357303 1107.5913299358601 40.744 2 0.18620134777711966 0.0006801564359802754 0.9438714419765777 ['ENSG00000187608|ENST00000649529|ISG15'] 69713 20971 LWAPRPFNL True PC9_epitope_Rep1 1112.61309944796 1112.6120099358602 85.49 2 0.18619990943881373 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 106594 14374 SVYVQLEKV True PC9_epitope_Rep2 1063.5913609438699 1063.59026993586 60.55 2 0.1861892332515159 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141934|O43688-3|PLPP2', 'ENSG00000141934|ENST00000434325|PLPP2', 'nc|ENSG00000141934|O43688-2|PLPP2'] 125903 6678 VNTLIRPDGEK True PC9_epitope_Rep5 1240.6775501793197 1240.67590490379 30.658 3 0.1861829224934568 0.0006801564359802754 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF'] 86857 16195 QRQQLLVSL True PC9_epitope_Rep2 1083.64004247179 1083.6389499358602 67.544 2 0.1861798284189952 0.0006801564359802754 0.9438714419765777 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 36415 13929 GVIDLVFEK True NCI_RA007_Epitope_Rep3 1018.5698972233 1018.56880993586 62.102 2 0.1861775071406456 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 11912 19126 DHSFSLEL True PC9_epitope_Rep4 946.4396113297399 946.43850993586 81.661 2 0.18617336232773204 0.0006801564359802754 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 21672 14800 ERVPINDVL True PC9_epitope_Rep4 1053.58185888933 1053.5807699358602 64.867 2 0.1861678949526063 0.0006801564359802754 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 100163 20938 SLLENLEKI True PC9_epitope_Rep3 1057.60192562757 1057.60082993586 85.815 2 0.1861670030231115 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 39783 19736 HQDNNFLYL True PC9_epitope_Rep3 1162.54072235334 1162.5396299358601 81.142 2 0.18616374885202894 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 31891 5696 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 26.94 1 0.18615819702325587 0.0006801564359802754 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 103942 18968 SRPPLLGF True PC9_epitope_Rep3 885.50723739709 885.50614993586 78.184 2 0.18615677657517227 0.0006801564359802754 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 129272 5345 VTDQASHIY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 25.607 2 0.18614596619741544 0.0006801564359802754 0.9438714419765777 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 108383 10160 TEDWDQPVA True H1975_Epitope_Rep1 1059.45090428943 1059.45037496793 44.019 1 0.1861448039687033 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 107703 17631 TALLKIEGV True PC9_epitope_Rep1 942.57498260374 942.5744349679301 72.61 1 0.18614119857640615 0.0006801564359802754 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 38772 14892 HHYEGAVVIL True PC9_epitope_Rep5 1136.5978433066398 1136.59674993586 62.285 2 0.18613809668241132 0.0006801564359802754 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 140655 21391 YYPNPPLVL True PC9_epitope_Rep2 1074.57498260374 1074.57388993586 87.751 2 0.18613764966762464 0.0006801564359802754 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 26682 12320 FLDDFESKY True H1975_Epitope_Rep1 1162.51825557326 1162.51714993586 52.416 2 0.1861325850604006 0.0006801564359802754 0.9438714419765777 ['ENST00000494757.5_1_17:38375603-38434474:+|nuORF', 'ENSG00000171475|ENST00000323571|WIPF2', 'nc|ENSG00000171475|Q8TF74-2|WIPF2'] 114286 8133 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 39.096 2 0.18613188518834 0.0006801564359802754 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 115141 4370 TVADHIQKV True PC9_epitope_Rep4 1009.5556441414899 1009.55454993586 23.251 2 0.18612732042194594 0.0006801564359802754 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 77560 19188 NYSNIRFQF True PC9_epitope_Rep2 1187.57235683479 1187.5712499358601 79.179 2 0.18612589955427367 0.0006801564359802754 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 132321 18933 VYLPNINKI True PC9_epitope_Rep3 1072.62808080576 1072.6269899358601 78.05 2 0.1861220450608254 0.0006801564359802754 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 86581 10464 QRDEKVLEL True PC9_epitope_Rep5 1128.6138872935999 1128.61225490379 45.235 3 0.1861204762067246 0.0006801564359802754 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 48582 10700 KEIDYILST True H1975_Epitope_Rep3 1080.5702911461199 1080.56918993586 46.233 2 0.18612026347328497 0.0006801564359802754 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 40679 6240 HTLNQIDSVK True PC9_epitope_Rep1 1153.6091362663299 1153.60750490379 28.815 3 0.18611959850150256 0.0006801564359802754 0.9438714419765777 ['CON__P12763'] 73897 4639 NHHLQETSF True PC9_epitope_Rep6 1111.50467119779 1111.50356993586 25.156 2 0.1861177925353376 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 105659 4950 SVFQTTDTK True NCI_RA007_Epitope_Rep5 1025.5029398622898 1025.50184993586 25.74 2 0.18611661540721589 0.0006801564359802754 0.9438714419765777 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 23878 6116 EYMKHTRLF True NCI_RA007_Epitope_Rep3 1223.6121134717898 1223.61046490379 31.048 3 0.1861162647209776 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 28259 20297 FRVDYILSV True PC9_epitope_Rep4 1110.60734536118 1110.6062499358602 86.215 2 0.18611514168178023 0.0006801564359802754 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 71985 18209 MQAERIFSEV True PC9_epitope_Rep5 1208.5859582936 1208.58486993586 75.053 2 0.18611091681970493 0.0006801564359802754 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 39874 12828 HQIEAVDGEEL True PC9_epitope_Rep5 1238.5778957076998 1238.57678993586 54.353 2 0.18610966339871152 0.0006801564359802754 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 104073 9243 SRTSIQSEL True PC9_epitope_Rep5 1019.52473793603 1019.52364993586 40.5 2 0.18610746980777287 0.0006801564359802754 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 75465 19730 NQIGAKFWEV True PC9_epitope_Rep5 1190.60840799034 1190.60730993586 80.938 2 0.1861069718077806 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 76815 14590 NVELDPEIQ True PC9_epitope_Rep6 1055.51350454599 1055.5124099358602 68.018 2 0.18610040100787295 0.0006801564359802754 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 94951 12857 RYPSNLQLF True NCI_RA007_Epitope_Rep4 1136.59784330664 1136.59674993586 56.537 2 0.18609864515789312 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 124328 13561 VLDPYLLKY True H1975_Epitope_Rep3 1122.63249747986 1122.6314099358601 57.445 2 0.18609335169807442 0.0006801564359802754 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 120996 5589 VGEVIVTK True NCI_RA007_Epitope_Rep1 843.50656869075 843.50546993586 25.805 2 0.186072103208647 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 100162 20622 SLLENLEKI True PC9_epitope_Rep2 1057.60192562757 1057.60082993586 84.756 2 0.18607009602340854 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 75487 19380 NQINGSFAL True PC9_epitope_Rep3 962.48214484806 962.48159496793 79.769 1 0.18606878563118984 0.0006801564359802754 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 135930 9389 YEVRLTQTV True H1975_Epitope_Rep2 1107.59242357303 1107.5913299358601 41.078 2 0.1860640993354053 0.0006801564359802754 0.9438714419765777 ['ENSG00000187608|ENST00000649529|ISG15'] 115533 3943 TVGVEPAADGK True NCI_RA007_Epitope_Rep5 1042.5294889632999 1042.52838993586 21.497 2 0.1860544455432789 0.0006801564359802754 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 24470 22010 FAIDPHLLL True PC9_epitope_Rep1 1037.59096702105 1037.5898699358602 89.485 2 0.18605328189004672 0.0006801564359802754 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 114900 6787 TTESEVMKY True H1975_Epitope_Rep2 1086.4903265732598 1086.48922993586 31.022 2 0.18604173059874612 0.0006801564359802754 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 17173 13474 EHAFAVQQL True PC9_epitope_Rep2 1041.5243440132099 1041.5232499358601 57.109 2 0.1860398138799473 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 92116 10413 RPYQPLPEA True PC9_epitope_Rep5 1069.55564414149 1069.5545499358602 45.038 2 0.1860377314911928 0.0006801564359802754 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 26239 19476 FHYEDVAVL True PC9_epitope_Rep5 1091.5287606873098 1091.52766993586 79.967 2 0.186034127415416 0.0006801564359802754 0.9438714419765777 ['ENSG00000146700|ENST00000275560|SSC4D', 'nc|ENSG00000146700|Q8WTU2-2|SSC4D'] 44346 17938 IMLEALERV True PC9_epitope_Rep6 1072.59506642532 1072.59396993586 81.625 2 0.18601100469412057 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 43562 16523 IIEPSLRQL True PC9_epitope_Rep2 1067.6338944621898 1067.63278993586 68.796 2 0.1860020190525112 0.0006801564359802754 0.9438714419765777 ['ENSG00000221983|ENST00000442744|UBA52'] 9223 7853 AVQEFGLAR True NCI_RA007_Epitope_Rep3 989.5294293936498 989.52832993586 38.01 2 0.18600201122323765 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 75480 8729 NQIKKIENL True PC9_epitope_Rep5 1098.6397081186199 1098.6386099358601 38.518 2 0.18599754567967397 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115685|Q15435-2|PPP1R7', 'ENSG00000115685|ENST00000234038|PPP1R7', 'nc|ENSG00000115685|Q15435-5|PPP1R7', 'nc|ENSG00000115685|Q15435-4|PPP1R7', 'nc|ENSG00000115685|Q15435-3|PPP1R7'] 132765 16219 VYSPHVLNL True PC9_epitope_Rep4 1040.5654805492 1040.5643899358602 70.329 2 0.1859965275742202 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 104781 12696 STDPLDAGVDY True H1975_Epitope_Rep2 1151.4982484046698 1151.49714993586 53.938 2 0.18599470472722385 0.0006801564359802754 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 102926 14893 SQIHDIVLV True PC9_epitope_Rep6 1022.5760452328999 1022.57494993586 69.278 2 0.18599363567277719 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 48402 4426 KEDKPPLAP True H1975_Epitope_Rep1 993.5494961318898 993.54838993586 22.035 2 0.1859911710372107 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 94988 9250 RYQDIIHSI True NCI_RA007_Epitope_Rep3 1143.6036569630699 1143.6020249037902 43.489 3 0.18597599043088178 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 56709 5271 LEAERSTNIAA True H1975_Epitope_Rep3 1173.5989655054502 1173.5978699358602 25.358 2 0.18596691469018242 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'ENST00000609021.1_1_6:125597294-125597426:-|nuORF'] 86272 9660 QQDPQQYNV True PC9_epitope_Rep1 1118.49925146418 1118.49814993586 42.013 2 0.18596379836215052 0.0006801564359802754 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 130430 17106 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 70.623 2 0.18596372946671047 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 140748 19523 YYQRGSSMVLF True PC9_epitope_Rep1 1349.64380752289 1349.64270993586 79.916 2 0.18595393022670167 0.0006801564359802754 0.9438714419765777 ['ENSG00000171867|ENST00000379440|PRNP'] 4675 15021 ALDENGNLWY True H1975_Epitope_Rep2 1193.53530261973 1193.5342099358602 62.928 2 0.18595175353562493 0.0006801564359802754 0.9438714419765777 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1'] 77408 19415 NYLVLPNRI True PC9_epitope_Rep5 1100.63422881536 1100.63312993586 79.728 2 0.1859467090535107 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 23932 14235 EYNNNFHVL True PC9_epitope_Rep4 1148.5250722892001 1148.5239699358601 62.662 2 0.18594635945012195 0.0006801564359802754 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 76304 11260 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.49727496793 48.356 1 0.185941966270462 0.0006801564359802754 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 83009 22685 PYISNIYLI True PC9_epitope_Rep1 1094.60119735158 1094.60010993586 92.062 2 0.1859399972191238 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 131854 16107 VYAVIPAEKF True PC9_epitope_Rep6 1135.62774645259 1135.62664993586 74.295 2 0.18593392197370615 0.0006801564359802754 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 98011 9893 SHSSFQASL True PC9_epitope_Rep5 962.44575933934 962.44466993586 43.023 2 0.1859264889363264 0.0006801564359802754 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 86584 11993 QRDETALQL True PC9_epitope_Rep1 1072.5512870370399 1072.55018993586 50.994 2 0.18592400258358247 0.0006801564359802754 0.9438714419765777 ['TRIP11|p.S1808Afs*25|2|0.16|ENSG00000100815|chr14:91975208-91975208|C/-|frameshift_variant', 'nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 75795 10298 NRAQIQTVI True PC9_epitope_Rep2 1041.59309227937 1041.59198993586 44.94 2 0.18592326239179932 0.0006801564359802754 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 89277 6412 RELEQRVSL True NCI_RA007_Epitope_Rep4 1128.62512068364 1128.62402993586 31.264 2 0.18590731127539387 0.0006801564359802754 0.9438714419765777 ['TAOK1|p.G928Vfs*42|1|0.31|ENSG00000160551|chr17:29542799-29542801|GCC/TT|frameshift_variant', 'ENSG00000160551|ENST00000261716|TAOK1', 'TAOK1|p.R841Q|1|0.16|ENSG00000160551|chr17:29534278-29534278|G/A|missense_variant', 'nc|ENSG00000160551|Q7L7X3-3|TAOK1'] 115123 17952 TTYEGIFKTL True PC9_epitope_Rep6 1171.6124903112698 1171.6113899358602 81.68 2 0.18590317185620767 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 41090 14113 HYLPDLHHL True PC9_epitope_Rep5 1143.5825275956702 1143.5808749037901 59.297 3 0.18590061473175845 0.0006801564359802754 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 47358 15428 IYHTGTFAQI True PC9_epitope_Rep5 1149.5818588893299 1149.5807699358602 64.353 2 0.18589948215271954 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'ENST00000587552.5_1_19:5708410-5719801:-|nuORF'] 24003 13444 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep4 1300.57578791316 1300.57468993586 59.609 2 0.18589262358248787 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 65127 5020 LSDPSGPKSY True H1975_Epitope_Rep3 1049.50293986229 1049.50184993586 24.431 2 0.18589001119444679 0.0006801564359802754 0.9438714419765777 ['RPS6KC1|p.K880Ffs*6|1|0.26|ENSG00000136643|chr1:213242113-213242120|CAAGGAAA/TTT|frameshift_variant', 'nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 46905 17976 IVISKLTQI True PC9_epitope_Rep5 1013.6484818971699 1013.64738993586 74.163 2 0.18588573783077628 0.0006801564359802754 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 47248 20236 IYEIIDNSQGF True PC9_epitope_Rep4 1297.6190322436898 1297.61792993586 85.979 2 0.18588002951439406 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 86977 14322 QRVPLSVQL True PC9_epitope_Rep6 1038.61857875122 1038.61748993586 66.988 2 0.18587849430022255 0.0006801564359802754 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 43490 19161 IHYYEQITL True PC9_epitope_Rep1 1178.5971746002997 1178.5960699358602 78.498 2 0.18585583492680605 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110080|Q11206-7|ST3GAL4', 'nc|ENSG00000110080|Q11206-3|ST3GAL4', 'nc|ENSG00000110080|Q11206-6|ST3GAL4', 'nc|ENSG00000110080|Q11206-5|ST3GAL4', 'nc|ENSG00000110080|Q11206-2|ST3GAL4', 'ENSG00000110080|ENST00000444328|ST3GAL4', 'nc|ENSG00000110080|Q11206-4|ST3GAL4'] 88214 19264 QYASAFHFL True PC9_epitope_Rep4 1082.51853035678 1082.51742993586 82.202 2 0.1858535538901231 0.0006801564359802754 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 2372 11029 AEQFRLEQI True H1975_Epitope_Rep1 1132.5876725457597 1132.58656993586 47.384 2 0.18584108266935834 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185104|Q9UNN5-2|FAF1', 'ENSG00000185104|ENST00000396153|FAF1'] 90845 3974 RKVQTQVRL True NCI_RA007_Epitope_Rep4 1126.69347502698 1126.69183490379 21.529 3 0.18583572686497282 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1', 'ENST00000490041.1_1_7:8198147-8258054:-|nuORF'] 117415 10120 VADLVENSY True H1975_Epitope_Rep2 1008.4763907612801 1008.47528993586 43.923 2 0.1858307747668658 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 89774 10034 RFEEAHFTF True NCI_RA007_Epitope_Rep3 1182.5458077337796 1182.54470993586 46.559 2 0.18582435746390785 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 23900 5755 EYM[Oxidation]KHTRLF True PC9_epitope_Rep2 1239.60702847179 1239.6053849037899 27.529 3 0.18582120630815765 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 140095 14143 YVPETVYRV True PC9_epitope_Rep5 1124.5866099165999 1124.58550993586 59.412 2 0.18581887776579 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 64473 19219 LQVEDLDRL True PC9_epitope_Rep1 1099.5873381925899 1099.58624993586 78.723 2 0.18580949853434237 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF', 'ENST00000479375.6_1_9:130556974-130569527:+|nuORF', 'ENST00000460181.5_1_9:130565203-130569527:+|nuORF'] 102631 15596 SQDARFYAL True PC9_epitope_Rep1 1069.51925863277 1069.5181699358602 64.81 2 0.1857915700211593 0.0006801564359802754 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 54225 21787 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 88.632 2 0.1857885283591168 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 102873 15913 SQHGVIIQL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 66.201 2 0.1857828086587096 0.0006801564359802754 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 125152 19417 VLPSVLNKF True PC9_epitope_Rep5 1015.60661708519 1015.60552993586 79.736 2 0.18577791963073131 0.0006801564359802754 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 70163 22315 LYLEPQGTLF True PC9_epitope_Rep5 1179.6175756917098 1179.61646993586 90.842 2 0.1857778576266264 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 25099 7348 FDKDGNGYISA True H1975_Epitope_Rep1 1185.53021723929 1185.52912993586 33.273 2 0.1857766555312515 0.0006801564359802754 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000585658.1_1_17:68237680-68237866:+|nuORF'] 104074 7275 SRTSIQSEL True PC9_epitope_Rep6 1019.52473793603 1019.52364993586 37.119 2 0.18576969246284902 0.0006801564359802754 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 10877 4438 DAPQDFHPDR True H1975_Epitope_Rep3 1196.52104953792 1196.51941490379 22.194 3 0.1857686873791362 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'FLNA|p.R664L|1|0.13|ENSG00000196924|chrX:154364557-154364557|C/A|missense_variant'] 1768 10742 AEHGIFLPP True H1975_Epitope_Rep3 979.51271670035 979.51160993586 46.399 2 0.18576489728686785 0.0006801564359802754 0.9438714419765777 ['ENSG00000159079|ENST00000290155|CFAP298'] 97781 8381 SHHENLVSF True PC9_epitope_Rep6 1068.49885754136 1068.49776993586 41.901 2 0.18576281546430043 0.0006801564359802754 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 4186 11091 AIDEDVLRY True H1975_Epitope_Rep2 1092.54513902744 1092.5440499358601 47.696 2 0.18575713855057946 0.0006801564359802754 0.9438714419765777 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2'] 115098 18418 TTVDHFWGL True PC9_epitope_Rep6 1074.51344497634 1074.5123499358601 83.49 2 0.185752210358997 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.P444Afs*17|1|0.44|ENSG00000164828|chr7:853570-853571|-/G|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 29447 21785 FVHDLVLYL True PC9_epitope_Rep3 1117.6171817688898 1117.6160899358601 89.095 2 0.18574904156190247 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 2167 8594 AEMPADSGYPA True H1975_Epitope_Rep2 1107.45427541771 1107.4531699358602 38.011 2 0.1857478852329872 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 69852 14010 LYANMFERL True NCI_RA007_Epitope_Rep5 1155.57466533391 1155.5735699358602 60.579 2 0.18574097674618312 0.0006801564359802754 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 140681 7372 YYPTEDVPR True NCI_RA007_Epitope_Rep5 1138.5294889632999 1138.52838993586 35.036 2 0.1857360537599765 0.0006801564359802754 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 134511 19373 WVDPNSPVL True PC9_epitope_Rep4 1025.51819600361 1025.5170899358602 82.628 2 0.1857353452337314 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 76488 10759 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4608749679298 46.414 1 0.1857331765291799 0.0006801564359802754 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 40945 5992 HWGGNVLGPK True NCI_RA007_Epitope_Rep5 1063.55631284783 1063.5552099358601 29.732 2 0.18573042696300557 0.0006801564359802754 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000492798.1_1_9:136217794-136218218:+|nuORF', 'ENST00000463740.5_1_9:136217403-136218218:+|nuORF', 'ENST00000429766.1_1_7:96830042-96830234:-|nuORF', 'ENST00000574864.1_1_6:137221518-137222013:-|nuORF'] 94354 18003 RYALQLQQI True PC9_epitope_Rep1 1131.64004247179 1131.6389499358602 74.042 2 0.18572777205044877 0.0006801564359802754 0.9438714419765777 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant'] 137314 9755 YLHSQVVSV True PC9_epitope_Rep6 1030.5447451046198 1030.54364993586 47.952 2 0.1857174110410738 0.0006801564359802754 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 107053 21006 SYLPLAHMF True PC9_epitope_Rep2 1077.53173789277 1077.53064993586 86.253 2 0.1857122269205879 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 117448 12446 VADTVARVL True PC9_epitope_Rep1 942.5498304850598 942.54872993586 52.739 2 0.1857096375515947 0.0006801564359802754 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 87890 10203 QVLSEVSRV True PC9_epitope_Rep4 1015.56620882519 1015.56510993586 46.922 2 0.18570545835444824 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000284753|P0DPD7|EEF1AKMT4'] 134508 20065 WVDPNSPVL True PC9_epitope_Rep2 1025.51819600361 1025.51767496793 82.586 1 0.18570266322013443 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 137066 5244 YLAEVATGEKR True NCI_RA007_Epitope_Rep1 1235.6510010783097 1235.64934490379 24.481 3 0.18570121884146798 0.0006801564359802754 0.9438714419765777 ['ENSG00000170027|ENST00000307630|YWHAG'] 54343 8073 KYQEVTNNL True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 36.412 2 0.18569297356182202 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 17453 20621 EHGIVVFSL True PC9_epitope_Rep5 999.5389314481899 999.53782993586 84.369 2 0.18568244161987404 0.0006801564359802754 0.9438714419765777 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 132737 21520 VYSIVPQSW True PC9_epitope_Rep5 1077.54949613189 1077.54838993586 87.812 2 0.18568105892068165 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 6908 9160 AQLAHIQAL True NCI_RA007_Epitope_Rep4 963.55016483823 963.54906993586 42.073 2 0.18568081798164002 0.0006801564359802754 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 73180 5396 NEEEIRANVA True H1975_Epitope_Rep2 1143.55201531303 1143.55090993586 25.789 2 0.1856732970954078 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 90346 17175 RIIDVVYNA True PC9_epitope_Rep3 1061.58694426977 1061.58584993586 71.222 2 0.18565689180906303 0.0006801564359802754 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 116516 18355 TYDYNFHSF True PC9_epitope_Rep3 1192.48253877088 1192.4814499358602 75.814 2 0.1856513160796393 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 49272 16937 KHGEIIIVL True PC9_epitope_Rep5 1020.6331661861999 1020.63206993586 70.164 2 0.18564406921030296 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115145|O75886-2|STAM2', 'ENST00000463854.5_1_2:152988626-153032156:-|nuORF', 'ENST00000482997.5_1_2:152982712-153032156:-|nuORF', 'ENSG00000115145|ENST00000263904|STAM2'] 68975 14437 LVGIDIFTGK True H1975_Epitope_Rep3 1061.61209638845 1061.61098993586 60.886 2 0.18564405348942808 0.0006801564359802754 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 76792 5696 NVDPVQHTY True H1975_Epitope_Rep2 1071.4985231881901 1071.49742993586 26.908 2 0.18563556367122178 0.0006801564359802754 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 26664 19207 FLASESLIKQI True PC9_epitope_Rep4 1247.71253870571 1247.7114499358602 81.979 2 0.1856292667806091 0.0006801564359802754 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 128379 9339 VSDRVTVLY True H1975_Epitope_Rep3 1050.57095985246 1050.5698699358602 40.922 2 0.1856221373596365 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 6656 15117 AQAEVYKELRL True PC9_epitope_Rep3 1318.7245003717399 1318.72285490379 63.284 3 0.18561858991188662 0.0006801564359802754 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 83320 14122 QALLDLHAL True NCI_RA007_Epitope_Rep4 992.5654805492001 992.56438993586 61.601 2 0.1856156029139412 0.0006801564359802754 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 133250 10083 WEEETVPTTA True H1975_Epitope_Rep3 1161.51898384925 1161.51788993586 43.823 2 0.18561290124201232 0.0006801564359802754 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 92232 7466 RQINVGNAL True NCI_RA007_Epitope_Rep4 983.5512274673898 983.55012993586 35.363 2 0.18561118455567194 0.0006801564359802754 0.9438714419765777 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 104317 13926 SSENPWMTEY True H1975_Epitope_Rep2 1242.48630382198 1242.4852099358602 58.714 2 0.18560850826440217 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000154429|Q6IQ19-2|CCSAP', 'ENST00000483092.1_1_1:229460984-229462796:-|nuORF', 'ENSG00000154429|ENST00000284617|CCSAP'] 21253 12461 ERIGETPEL True PC9_epitope_Rep1 1042.5294889632999 1042.52838993586 52.797 2 0.18560515600526714 0.0006801564359802754 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 45515 6917 ISETYDLK True NCI_RA007_Epitope_Rep2 967.48622716899 967.48512993586 31.526 2 0.18560501955248868 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 64257 19856 LQLDKEFQL True PC9_epitope_Rep2 1132.61282466444 1132.61172993586 81.768 2 0.1856047082193452 0.0006801564359802754 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'nc|ENSG00000068438|Q9UET6-2|FTSJ1', 'ENST00000487353.5_1_X:48336396-48336561:+|nuORF'] 52621 20257 KQDLVELYL True PC9_epitope_Rep2 1119.6175756917098 1119.61646993586 83.339 2 0.18560405275381173 0.0006801564359802754 0.9438714419765777 ['ENSG00000160445|ENST00000291900|ZER1'] 97687 8458 SHDPVSGTQGL True PC9_epitope_Rep5 1096.51490152832 1096.51380993586 37.476 2 0.1856031964917365 0.0006801564359802754 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138771|ENST00000296043|SHROOM3'] 76497 8160 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.5822099358602 36.338 2 0.1856018541597856 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 131684 20633 VWMRSPLSTF True PC9_epitope_Rep5 1222.61686449906 1222.61576993586 84.417 2 0.18560143551534253 0.0006801564359802754 0.9438714419765777 ['ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF', 'chr15:60364523-60370591|201|71.34|0.76|6.56|-|0|ANXA2,None|1', 'chr15:60364523-60366446|150|115.17|0.14|9.65|-|0|TE_info:SVA_E,SVA_E_dup534,SVA,Retroposon,donor,+,60366446,60366898|ANXA2,None|4'] 114812 19626 TTDFIFNLY True H1975_Epitope_Rep1 1132.54407639828 1132.5429699358601 81.701 2 0.1856011403119144 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 28410 11116 FSDVNMQEY True H1975_Epitope_Rep3 1131.4542754177098 1131.4531699358602 47.853 2 0.18560074703445523 0.0006801564359802754 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 40803 19258 HVIDMDTIDV True PC9_epitope_Rep5 1156.54342477528 1156.5423299358602 79.117 2 0.1855951123133018 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000144744|Q8TBC4-2|UBA3', 'ENSG00000144744|ENST00000361055|UBA3', 'ENST00000465108.5_1_3:69120684-69129504:-|nuORF'] 126944 7505 VPVLAENYK True H1975_Epitope_Rep1 1031.56514619603 1031.56404993586 33.866 2 0.18557732078726416 0.0006801564359802754 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2', 'nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 139334 12611 YTDSSSILNY True H1975_Epitope_Rep2 1161.51898384925 1161.51788993586 53.605 2 0.1855649858676382 0.0006801564359802754 0.9438714419765777 ['ENSG00000111647|ENST00000279907|BLTP3B'] 28753 6836 FTAERSSYY True H1975_Epitope_Rep2 1122.49818883502 1122.49708993586 31.211 2 0.1855624955478763 0.0006801564359802754 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 41033 11493 HYILHNSFF True NCI_RA007_Epitope_Rep1 1176.5716285587998 1176.5705299358601 48.67 2 0.18556013853241526 0.0006801564359802754 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 54294 11365 KYPSDLPYM True NCI_RA007_Epitope_Rep5 1112.5212327787199 1112.52012993586 50.366 2 0.18555221921419324 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG', 'ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG'] 94939 12083 RYPDSHQLF True PC9_epitope_Rep5 1161.55670677065 1161.55560993586 51.471 2 0.18555142950192743 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 71330 21819 MHHWLLFEM True PC9_epitope_Rep5 1242.5678061316598 1242.5667099358602 88.959 2 0.18554708740814296 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74'] 8787 7215 AVFDGAQVTSK True NCI_RA007_Epitope_Rep2 1121.57168812845 1121.5705899358602 32.684 2 0.18554011929564573 0.0006801564359802754 0.9438714419765777 ['ENSG00000175274|ENST00000525680|TP53I11'] 7905 5807 ATATGTEILK True NCI_RA007_Epitope_Rep4 1003.5549754351499 1003.55386993586 28.961 2 0.18553850406328778 0.0006801564359802754 0.9438714419765777 ['ENST00000562757.5_1_16:66857380-66864856:-|nuORF', 'ENST00000563419.5_1_16:66858748-66864862:-|nuORF', 'ENST00000569963.1_1_16:66860370-66864856:-|nuORF', 'ENST00000564040.6_1_16:66857135-66864856:-|nuORF', 'ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1'] 64360 19584 LQPERYELW True PC9_epitope_Rep5 1232.61897267404 1232.6178699358602 80.383 2 0.18553616936142117 0.0006801564359802754 0.9438714419765777 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'nc|ENSG00000127663|O94953-2|KDM4B'] 125001 7681 VLNTNIDGR True PC9_epitope_Rep1 1000.53015766964 1000.52906993586 34.368 2 0.18553521189624095 0.0006801564359802754 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 132167 10163 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5281849037901 44.079 3 0.1855344977439879 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 61333 6962 LLEEHTEEY True H1975_Epitope_Rep2 1161.51898384925 1161.51788993586 31.699 2 0.18553276902827237 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENSG00000048342|ENST00000424120|CC2D2A', 'ENST00000513811.5_1_4:15471657-15545375:+|nuORF'] 75670 16678 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53911496793 68.981 1 0.18553104490416297 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 118752 10249 VEDLRLINT True H1975_Epitope_Rep3 1071.59242357303 1071.5913299358601 44.471 2 0.1855293935065278 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000595844.5_1_19:12787852-12790977:-|nuORF'] 7079 16999 AQWHEQILV True PC9_epitope_Rep5 1122.5821932425 1122.58108993586 70.405 2 0.1855281606312091 0.0006801564359802754 0.9438714419765777 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF', 'ARRDC1|p.R234Q|1|0.08|ENSG00000197070|chr9:137614381-137614381|G/A|missense_variant'] 73685 11305 NGQDLGVAFK True PC9_epitope_Rep2 1047.5349086969097 1047.53380993586 48.807 2 0.18552486443011584 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 127090 11240 VQANSGAIVKL True PC9_epitope_Rep4 1098.6397081186199 1098.6386099358601 51.009 2 0.18552436379793108 0.0006801564359802754 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 127364 9754 VQPSKYHFL True PC9_epitope_Rep4 1117.5920296502102 1117.59092993586 45.156 2 0.18552368152659998 0.0006801564359802754 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 136427 14306 YHGAEIVSL True PC9_epitope_Rep2 987.50254593947 987.50144993586 60.292 2 0.18551180130769873 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 138394 13428 YRDPNTIETL True PC9_epitope_Rep3 1220.60371653272 1220.60260993586 56.692 2 0.18549853806470334 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 138970 11563 YSESSQLLY True H1975_Epitope_Rep3 1088.50260550912 1088.5015099358602 49.605 2 0.18549665278743172 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 29700 18874 FVNVVPTFGK True PC9_epitope_Rep3 1106.6124307416198 1106.61132993586 77.821 2 0.18548156123905302 0.0006801564359802754 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 67308 13366 LTDPMFRGIY True H1975_Epitope_Rep1 1211.6008800817501 1211.5997899358601 56.523 2 0.18547354559611223 0.0006801564359802754 0.9438714419765777 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000522280.1_1_8:125534346-125551287:-|nuORF'] 140909 14039 YYVWLQHTL True NCI_RA007_Epitope_Rep3 1221.61824439805 1221.6171499358602 62.529 2 0.18546770188436718 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000003402|O15519-4|CFLAR', 'nc|ENSG00000003402|O15519-15|CFLAR', 'nc|ENSG00000003402|O15519-8|CFLAR', 'ENSG00000003402|ENST00000309955|CFLAR'] 45387 8641 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.43850993586 38.196 2 0.18546317360947645 0.0006801564359802754 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 15207 13145 EAFNMIDQNR True PC9_epitope_Rep5 1236.5557207944798 1236.55462993586 55.567 2 0.18545874662699688 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 104245 9435 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4603699358602 41.293 2 0.18545867956763235 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 75121 19586 NMVDIIHSV True PC9_epitope_Rep2 1026.51681610462 1026.51570993586 80.72 2 0.18545715491237036 0.0006801564359802754 0.9438714419765777 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 8624 7753 AVALPLQTK True NCI_RA007_Epitope_Rep3 939.57531695691 939.57420993586 37.619 2 0.18545509425200102 0.0006801564359802754 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 89737 7256 REYQELM[Oxidation]SV True NCI_RA007_Epitope_Rep5 1169.5386741284499 1169.5375699358601 34.587 2 0.1854547368829286 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 47595 19527 IYNGKLFDLL True PC9_epitope_Rep6 1194.6648602373 1194.66376993586 87.774 2 0.18544380524845394 0.0006801564359802754 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 102009 4761 SPPGQVTEAVK True H1975_Epitope_Rep3 1111.5873381925899 1111.58624993586 23.44 2 0.1854410612872866 0.0006801564359802754 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 8217 5622 ATIEEAYSR True NCI_RA007_Epitope_Rep4 1038.4981888350198 1038.49708993586 28.225 2 0.185438799643297 0.0006801564359802754 0.9438714419765777 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-2|FCHO2'] 93891 17772 RVIDDSLVVGV True PC9_epitope_Rep4 1170.66083748602 1170.6597499358602 76.388 2 0.18543590066427088 0.0006801564359802754 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 11683 17897 DHDRFWVL True PC9_epitope_Rep6 1086.52467836638 1086.5235899358602 81.466 2 0.18543513978694626 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 53308 16202 KTMEDTLMTV True PC9_epitope_Rep4 1167.55154693083 1167.5504499358601 70.266 2 0.18543496561268982 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 65021 12550 LSDISVVSNY True H1975_Epitope_Rep1 1095.54480467427 1095.54370993586 53.319 2 0.1854335327850188 0.0006801564359802754 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.S393F|1|0.37|ENSG00000137965|chr1:78662768-78662768|C/T|missense_variant', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 49401 20068 KILDYEVTL True PC9_epitope_Rep1 1092.6066766548402 1092.60556993586 82.018 2 0.18542567553330475 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'ENST00000503773.6_1_5:55236912-55256289:-|nuORF', 'ENST00000506241.1_1_5:55251841-55256299:-|nuORF'] 107069 21909 SYLSSILRF True PC9_epitope_Rep5 1084.59169529704 1084.5905899358602 89.313 2 0.1854240032917289 0.0006801564359802754 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 40345 6376 HRTDSEIAL True PC9_epitope_Rep2 1040.5250722892 1040.5239699358601 29.928 2 0.1854172027479034 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 132021 14764 VYGSFASKL True PC9_epitope_Rep3 970.5123823471799 970.51128993586 61.926 2 0.18540144038133807 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 26646 18868 FLAEDALNTV True PC9_epitope_Rep6 1091.54989005471 1091.5487899358602 85.224 2 0.1853986299678692 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 23830 19332 EYLLKVNEI True PC9_epitope_Rep3 1119.61757569171 1119.61646993586 79.581 2 0.18539859381303794 0.0006801564359802754 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 28769 9438 FTDAGFEHY True H1975_Epitope_Rep3 1085.4454249861699 1085.4443299358602 41.305 2 0.18539787950708742 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A'] 136812 17291 YITERIIAV True PC9_epitope_Rep2 1076.62299542532 1076.62188993586 71.768 2 0.1853916629201094 0.0006801564359802754 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 85143 15376 QITVNDLPVGR True PC9_epitope_Rep1 1210.6669854956199 1210.6658899358602 63.961 2 0.18539098907493456 0.0006801564359802754 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 11715 15286 DHFNAMTSL True PC9_epitope_Rep4 1034.4491304676199 1034.4480299358602 66.727 2 0.1853889750847511 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 77433 14017 NYNEKIYEL True PC9_epitope_Rep4 1184.5713537752797 1184.5702499358601 61.829 2 0.18538701363327278 0.0006801564359802754 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 7149 12897 AQYLINVRL True NCI_RA007_Epitope_Rep3 1088.63422881536 1088.63312993586 57.995 2 0.18538525469792824 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 45215 14536 IRKPYIWEY True PC9_epitope_Rep4 1266.67609362734 1266.6744449037901 63.827 3 0.18537799165524593 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 114004 19608 TRLPTPVLL True PC9_epitope_Rep5 1008.6331661861999 1008.63206993586 80.474 2 0.18537616111193086 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 52816 19185 KQVEEIFNL True PC9_epitope_Rep2 1118.5971746003 1118.5960699358602 79.168 2 0.1853735749421789 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 115695 17431 TVLEEIGNRV True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 72.05 2 0.1853687493413203 0.0006801564359802754 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 3875 10245 AHDDGRWSL True PC9_epitope_Rep1 1055.47845644995 1055.47734993586 44.289 2 0.18536713074349676 0.0006801564359802754 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 84870 11055 QHQSGIVQL True PC9_epitope_Rep3 1008.5352430500798 1008.53414993586 47.52 2 0.18536579471195713 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 89724 9845 REYQELMSV True H1975_Epitope_Rep1 1153.54375912845 1153.5426699358602 42.799 2 0.18536362802233755 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 99935 21491 SLIFKLEEL True PC9_epitope_Rep5 1090.6274120994199 1090.62630993586 87.699 2 0.18535762668616798 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2'] 27717 21029 FQDPVPLTV True PC9_epitope_Rep3 1014.5385970950199 1014.53807496793 86.166 1 0.18535615625001026 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 130798 8558 VVESAYEVIK True H1975_Epitope_Rep1 1135.6124903112698 1135.6113899358602 37.844 2 0.18535287167133901 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 43867 17602 ILDEAIYKV True PC9_epitope_Rep5 1062.5961119711399 1062.5950099358602 72.714 2 0.18533824302454835 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 1524 15219 AEEQFILSQVA True H1975_Epitope_Rep2 1233.6241176241301 1233.6230299358601 63.696 2 0.18533664719471643 0.0006801564359802754 0.9438714419765777 ['ENSG00000137100|ENST00000259632|DCTN3', 'nc|ENSG00000137100|O75935-2|DCTN3'] 12035 10948 DIDISSPEFK True H1975_Epitope_Rep1 1149.55536935797 1149.55426993586 47.075 2 0.18533335718679753 0.0006801564359802754 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 140354 8068 YYEHVKARF True PC9_epitope_Rep5 1211.60874234351 1211.60764993586 35.971 2 0.18533129648494137 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 11663 10575 DHDIPQQL True PC9_epitope_Rep4 964.46140940348 964.46030993586 48.416 2 0.18533093723285315 0.0006801564359802754 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 20693 11078 EQILEEFSK True NCI_RA007_Epitope_Rep2 1121.5604547384098 1121.5593499358602 47.679 2 0.18533040486264551 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 24145 13287 EYSRFVNQI True PC9_epitope_Rep4 1154.5720224816198 1154.57092993586 59.004 2 0.18531940219674337 0.0006801564359802754 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'ENST00000483237.1_1_1:155891178-155891799:-|nuORF', 'ENST00000478002.5_1_1:155885750-155895538:-|nuORF', 'nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 40100 5967 HRDGALTQL True PC9_epitope_Rep2 1009.53049202281 1009.52938993586 28.34 2 0.18531577598129578 0.0006801564359802754 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 102962 8624 SQIQEFKEA True PC9_epitope_Rep1 1078.5294889632999 1078.52838993586 38.01 2 0.18531471852434211 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 53083 15408 KSDPFLVFY True H1975_Epitope_Rep3 1114.5698972233 1114.5688099358601 64.678 2 0.18531454957559923 0.0006801564359802754 0.9438714419765777 ['ENSG00000124772|ENST00000244751|CPNE5', 'ENST00000551855.1_1_12:39120300-39161507:-|nuORF', 'ENSG00000139117|ENST00000331366|CPNE8', 'ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000144550|Q8IYJ1-2|CPNE9'] 86964 19340 QRVEDAFYTL True PC9_epitope_Rep3 1240.6088019131596 1240.6077099358602 79.612 2 0.18531293314799688 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS'] 139945 20113 YVIDPIKGLKL True PC9_epitope_Rep5 1257.7696596590097 1257.7680149037901 82.412 3 0.1853117780055084 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 115467 16259 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep2 1178.5641606002998 1178.56306993586 67.782 2 0.18530546395248945 0.0006801564359802754 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 61141 17510 LLDELPM[Oxidation]IY True H1975_Epitope_Rep2 1121.56784899841 1121.5667499358601 72.648 2 0.18530102045550648 0.0006801564359802754 0.9438714419765777 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 86239 14986 QPYMPTVSA True PC9_epitope_Rep4 992.4637179025999 992.4631649679301 65.583 1 0.18529976343697777 0.0006801564359802754 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 138928 11265 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep3 1177.4849072200898 1177.48380993586 48.434 2 0.18529865621564734 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 132194 20330 VYKAFVMETF True PC9_epitope_Rep3 1233.6103821362897 1233.60928993586 83.449 2 0.1852951508931848 0.0006801564359802754 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 1299 7361 AEDVLSGKVSA True H1975_Epitope_Rep2 1074.55570371114 1074.55460993586 33.254 2 0.1852943971379167 0.0006801564359802754 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 97979 7790 SHSEAGSRIVL True PC9_epitope_Rep1 1154.6043852390599 1154.6027249037902 34.788 3 0.18528567487273354 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'nc|ENSG00000159322|Q9BRR6-4|ADPGK', 'nc|ENSG00000159322|Q9BRR6-3|ADPGK', 'ENST00000562621.1_1_15:73044684-73048205:-|nuORF', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF', 'ENST00000569534.5_1_15:73044684-73076051:-|nuORF'] 111027 4888 TLDNAYM[Oxidation]EK True NCI_RA007_Epitope_Rep2 1099.4855759264299 1099.48446993586 23.635 2 0.1852829741964792 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 129704 17427 VTITGIVKV True PC9_epitope_Rep5 928.59571804832 928.59462993586 72.033 2 0.18527963578910037 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 18881 12256 ELEKSVYWDY True H1975_Epitope_Rep1 1330.60813320682 1330.60702993586 52.166 2 0.18527847861294847 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'ENSG00000141258|ENST00000268989|SGSM2'] 113020 15522 TPTPVPVV True PC9_epitope_Rep5 808.4694549060399 808.46890496793 64.715 1 0.18527809090099745 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 126713 8818 VPRQPTVTSV True PC9_epitope_Rep1 1082.60840799034 1082.60730993586 38.761 2 0.18527784134947636 0.0006801564359802754 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5'] 69927 18367 LYDPVISKL True PC9_epitope_Rep2 1046.6011973515801 1046.60010993586 75.979 2 0.18527779788950918 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 41365 4631 IANPVEGSSGR True H1975_Epitope_Rep3 1085.5465360097699 1085.54542993586 22.936 2 0.18527327478742153 0.0006801564359802754 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1'] 35392 9756 GTDDGRLLEY True H1975_Epitope_Rep3 1137.5302172392899 1137.52912993586 42.549 2 0.1852704867714235 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 6787 12542 AQFEHTILL True NCI_RA007_Epitope_Rep1 1070.5760452329 1070.57494993586 52.765 2 0.18526719435414396 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 2486 4361 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 21.894 2 0.18526706074557425 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 45270 9154 IRYPDSHQL True PC9_epitope_Rep5 1127.57235683479 1127.57071490379 40.157 3 0.18526279391469047 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 42235 3412 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 17.959 2 0.18526024999618868 0.0006801564359802754 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 18756 12084 ELDPNNAVYY True H1975_Epitope_Rep2 1196.53496826656 1196.5338699358601 51.564 2 0.1852600157803437 0.0006801564359802754 0.9438714419765777 ['ENSG00000197860|ENST00000381007|SGTB'] 89268 6994 RELEDDARVIA True H1975_Epitope_Rep2 1285.6626283911698 1285.66099490379 31.825 3 0.18525536532095999 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 48848 10001 KESDVGFIP True H1975_Epitope_Rep2 990.5022115862998 990.50110993586 43.458 2 0.18525453772062178 0.0006801564359802754 0.9438714419765777 ['ENSG00000112339|ENST00000367837|HBS1L', 'nc|ENSG00000112339|Q9Y450-4|HBS1L'] 27723 19036 FQDPVPLTV True PC9_epitope_Rep6 1014.5385970950199 1014.53807496793 85.864 1 0.1852495246377053 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 129394 7208 VTEGSFVYK True NCI_RA007_Epitope_Rep5 1028.5178616504397 1028.51676993586 34.403 2 0.1852480110293507 0.0006801564359802754 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 101144 6638 SLVNLGGSK True NCI_RA007_Epitope_Rep3 873.4919812557699 873.49088993586 33.179 2 0.18524548812383956 0.0006801564359802754 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 125481 10935 VLVDQTTGLSR True PC9_epitope_Rep5 1187.65100107831 1187.64990993586 47.051 2 0.1852436723528195 0.0006801564359802754 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 105609 10326 SVELPIVGK True NCI_RA007_Epitope_Rep5 940.5593325395998 940.55822993586 46.35 2 0.18523674105371157 0.0006801564359802754 0.9438714419765777 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 24451 16362 FAHPYQYEL True PC9_epitope_Rep5 1166.53965972418 1166.53856993586 67.934 2 0.18523478059504986 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 87753 20451 QVFPGLLERV True PC9_epitope_Rep5 1156.6604435631998 1156.65934993586 83.701 2 0.18523233119861945 0.0006801564359802754 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 14646 9843 DVNAAIATIK True NCI_RA007_Epitope_Rep1 1014.57095985246 1014.56986993586 42.288 2 0.18523200162001244 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 1969 5745 AEIRHVLVT True H1975_Epitope_Rep3 1036.6029286870798 1036.60182993586 27.124 2 0.18522557011493984 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 52190 18393 KMIEDLQNEL True PC9_epitope_Rep3 1231.61183868827 1231.6107499358602 75.956 2 0.18521790290121906 0.0006801564359802754 0.9438714419765777 ['ENSG00000198887|ENST00000361138|SMC5'] 27713 21095 FQDPVPLTV True PC9_epitope_Rep1 1014.5385970950199 1014.53807496793 85.973 1 0.18521579796367416 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 54160 13814 KYNLINEYF True NCI_RA007_Epitope_Rep3 1202.5971746003 1202.5960699358602 61.666 2 0.18521209607772385 0.0006801564359802754 0.9438714419765777 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 8100 5624 ATELTHEDY True H1975_Epitope_Rep2 1077.46146897313 1077.4603699358602 26.632 2 0.18520602165811312 0.0006801564359802754 0.9438714419765777 ['ENSG00000165916|ENST00000298852|PSMC3'] 91049 21485 RLLDLENIQI True PC9_epitope_Rep3 1225.70303665117 1225.70192993586 87.935 2 0.18520467191094678 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'AOAH-ELMO1|1|fusion', 'AOAH-ELMO1|2|fusion', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ENST00000487843.1_1_7:36895158-37025590:-|nuORF', 'nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 77394 20159 NYLSIFRKF True PC9_epitope_Rep5 1186.6498788795 1186.6487899358601 82.59 2 0.18519502306627636 0.0006801564359802754 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 106342 5111 SVSEVVVNR True NCI_RA007_Epitope_Rep5 987.53490869691 987.53380993586 26.357 2 0.1851854541030265 0.0006801564359802754 0.9438714419765777 ['ENST00000578759.1_1_17:60217316-60217976:-|nuORF', 'ENSG00000099821|ENST00000588649|POLRMT'] 77309 14922 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.6069699358602 62.22 2 0.18517790477871002 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 91656 13137 RPFQSLIHA True PC9_epitope_Rep3 1067.58761297611 1067.58650993586 55.558 2 0.18517620889602204 0.0006801564359802754 0.9438714419765777 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 72246 20203 MRYVASYLL True PC9_epitope_Rep3 1114.5845017416198 1114.5834099358601 82.969 2 0.18516937426678873 0.0006801564359802754 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 129208 2757 VTDKSMVDKY True H1975_Epitope_Rep2 1184.5747249035599 1184.57308490379 14.633 3 0.18516377629240036 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 91153 19076 RLPETLPSL True PC9_epitope_Rep3 1024.59169529704 1024.5905899358602 78.599 2 0.1851608619007863 0.0006801564359802754 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 44535 13347 IPAPPLSKV True PC9_epitope_Rep1 920.56950330048 920.56840993586 56.198 2 0.18515973724376694 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF'] 102912 17245 SQIHDIVLV True PC9_epitope_Rep1 1022.5760452328999 1022.57494993586 71.151 2 0.18515531467601226 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 86692 13102 QRIDEFEAM True PC9_epitope_Rep6 1137.5124590001699 1137.51136993586 62.01 2 0.18515381264158612 0.0006801564359802754 0.9438714419765777 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 135586 16619 YEELNVWQV True H1975_Epitope_Rep2 1178.5607890915799 1178.5596899358602 69.158 2 0.18515242404474244 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 113997 18968 TRLPIDVQL True PC9_epitope_Rep4 1053.61824439805 1053.6171499358602 81.05 2 0.18514594947433707 0.0006801564359802754 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 16712 6242 EEVSSM[Oxidation]VLTK True NCI_RA007_Epitope_Rep2 1137.55874086669 1137.5576499358601 28.885 2 0.1851444527728107 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 73973 8286 NHNSQVWRV True PC9_epitope_Rep1 1138.5631891334199 1138.56154490379 36.705 3 0.18514089972628922 0.0006801564359802754 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 129130 4531 VTDALNATR True NCI_RA007_Epitope_Rep4 959.50360856863 959.50250993586 23.824 2 0.1851344441413185 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30259979-30260078:-|nuORF'] 70124 17710 LYKDVRDLL True PC9_epitope_Rep5 1133.6444591458899 1133.64280490379 73.139 3 0.18513207842701 0.0006801564359802754 0.9438714419765777 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1', 'ANKZF1|p.T270S|1|0.12|ENSG00000163516|chr2:219233422-219233422|A/T|missense_variant'] 138527 15003 YRLLPGPSA True PC9_epitope_Rep3 972.5392658013599 972.53816993586 62.836 2 0.18512570060322384 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 21780 13269 ESDFSNPLY True H1975_Epitope_Rep2 1070.4556553167 1070.45507496793 56.168 1 0.1851223348968394 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 98389 13416 SIIDDRVIL True NCI_RA007_Epitope_Rep4 1042.60225998074 1042.60116993586 58.785 2 0.18512184560484746 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'ENSG00000165475|ENST00000298248|CRYL1'] 97699 17186 SHDYSLYSL True PC9_epitope_Rep2 1083.48728979815 1083.48618993586 71.364 2 0.1851201661353223 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136'] 68012 14792 LTMEVIRQV True PC9_epitope_Rep6 1087.60596546219 1087.60486993586 68.866 2 0.1851178113683089 0.0006801564359802754 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'NFKBIA|p.L131Wfs*33|1|0.1|ENSG00000100906|chr14:35403306-35403306|G/-|frameshift_variant', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 127070 15943 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 73.621 2 0.18510561662982772 0.0006801564359802754 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 73637 17147 NGISDLVKV True PC9_epitope_Rep4 943.53384606775 943.53274993586 73.963 2 0.18510258516065925 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 130951 21031 VVISSDGQFAL True PC9_epitope_Rep1 1134.5920892198599 1134.59098993586 85.724 2 0.1851018182255482 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 38776 16682 HHYELPAIL True PC9_epitope_Rep4 1091.5763795860698 1091.5752899358602 72.142 2 0.18510116609687613 0.0006801564359802754 0.9438714419765777 ['ENSG00000182087|ENST00000356663|TMEM259'] 2423 6910 AEQLRGFNA True H1975_Epitope_Rep2 1004.5039429217999 1004.50284993586 31.5 2 0.1850848264551998 0.0006801564359802754 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 136830 22402 YIVDLLTHL True PC9_epitope_Rep1 1085.61209638845 1085.61098993586 90.989 2 0.1850816679582544 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2', 'GFOD2|p.V233Cfs*3|1|0.17|ENSG00000141098|chr16:67675617-67675618|-/C|frameshift_variant'] 123296 13755 VHSEQVFAL True PC9_epitope_Rep6 1028.5290950404797 1028.5279899358602 64.706 2 0.18507990249582448 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 94362 17544 RYALQMEQL True PC9_epitope_Rep1 1150.5804789903398 1150.57938993586 72.276 2 0.18507928982932256 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 103422 23248 SQYPEIIFL True PC9_epitope_Rep1 1108.580461907 1108.57987496793 94.211 1 0.18507872771934733 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 16441 11121 EELNADLFR True H1975_Epitope_Rep1 1105.5403880001697 1105.53928993586 47.742 2 0.18507855052966243 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 137657 14147 YLYPDITRL True H1975_Epitope_Rep1 1152.6179100448799 1152.6168099358601 59.589 2 0.1850749842945068 0.0006801564359802754 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 132164 8670 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5281849037901 40.838 3 0.18507248885562566 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 22143 9492 ESYSVYVYK True NCI_RA007_Epitope_Rep1 1136.5389910178399 1136.5378899358602 40.916 2 0.1850665096007581 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 26269 12760 FIDASRLVY True H1975_Epitope_Rep2 1082.5760452329 1082.57494993586 54.185 2 0.1850660833207134 0.0006801564359802754 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'CTNNA1|p.L776Pfs*102|1|0.11|ENSG00000044115|chr5:138932603-138932604|-/C|frameshift_variant', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 136443 13169 YHGEVPVSL True PC9_epitope_Rep4 999.5025459394699 999.50144993586 58.552 2 0.18506495209016313 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 52505 12473 KPNPNQIISV True PC9_epitope_Rep5 1108.62405805448 1108.62296993586 52.976 2 0.18506175505076347 0.0006801564359802754 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 110978 8508 TLDDESLKY True H1975_Epitope_Rep3 1082.5131701928199 1082.5120699358602 37.711 2 0.18505903416885772 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 114045 15764 TRNDYVMMY True PC9_epitope_Rep1 1191.50526544475 1191.50416993586 65.459 2 0.18505846816588142 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 139337 12547 YTDSSSILNY True H1975_Epitope_Rep3 1161.51898384925 1161.51788993586 53.461 2 0.18505824720796488 0.0006801564359802754 0.9438714419765777 ['ENSG00000111647|ENST00000279907|BLTP3B'] 117828 13476 VANVSLLALYK True NCI_RA007_Epitope_Rep5 1189.7070594024497 1189.7059699358601 58.52 2 0.1850534833315068 0.0006801564359802754 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 71160 5714 MEVKPSSVTA True H1975_Epitope_Rep2 1047.52704643515 1047.5259499358601 26.977 2 0.18504515589920825 0.0006801564359802754 0.9438714419765777 ['BTG3|p.P193Afs*29|1|0.14|ENSG00000154640|chr21:17594276-17594277|-/T|frameshift_variant', 'ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 35647 5162 GTMKAQGVLLK True NCI_RA007_Epitope_Rep3 1144.6638146914797 1144.66216490379 27.298 3 0.18503708224149487 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166482|P55083-2|MFAP4'] 139852 15496 YVDPQFLTY True H1975_Epitope_Rep1 1144.54407639828 1144.54357496793 64.88 1 0.18503472651385988 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 43444 10675 IHSSETLTL True PC9_epitope_Rep4 999.52367530687 999.52256993586 48.808 2 0.18503421317263832 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 21795 13889 ESDLDYIQY True H1975_Epitope_Rep2 1144.4924347482402 1144.4913299358602 58.569 2 0.18503023098628762 0.0006801564359802754 0.9438714419765777 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 110082 20740 TIAEGLTLAQV True PC9_epitope_Rep2 1114.62338934814 1114.6228749679299 85.216 1 0.1850253353402492 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 48719 6740 KENEGFTVTA True H1975_Epitope_Rep2 1094.52440358286 1094.5233099358602 30.84 2 0.18501703000959283 0.0006801564359802754 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3'] 132470 5788 VYPARTQTL True NCI_RA007_Epitope_Rep5 1047.57129420563 1047.57018993586 28.95 2 0.1850162622755691 0.0006801564359802754 0.9438714419765777 ['ENSG00000198502|ENST00000374975|HLA-DRB5'] 91544 17119 RPADVIFATV True PC9_epitope_Rep6 1087.60259433391 1087.6014899358602 78.427 2 0.18501375561581232 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 124389 16599 VLEDTENWLY True H1975_Epitope_Rep2 1280.59248314268 1280.5913899358602 69.074 2 0.1850097920677791 0.0006801564359802754 0.9438714419765777 ['ENSG00000164070|ENST00000296464|HSPA4L'] 75988 20482 NRIDILDSALL True PC9_epitope_Rep4 1241.69795127073 1241.6968499358602 86.932 2 0.1850055123962352 0.0006801564359802754 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 20825 15597 EQPETYYKW True PC9_epitope_Rep3 1242.5557037111398 1242.55460993586 65.142 2 0.18500488284663932 0.0006801564359802754 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1'] 124366 10657 VLDVETGNEY True H1975_Epitope_Rep2 1137.51898384925 1137.51788993586 46.016 2 0.18500084289864122 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12'] 37958 6318 HEFDEQVAA True NCI_RA007_Epitope_Rep4 1044.4512386426 1044.45014993586 30.907 2 0.1849979078138945 0.0006801564359802754 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF', 'HERC2|p.R4650W|2|0.28|ENSG00000128731|chr15:28113644-28113644|G/A|missense_variant'] 35798 5710 GTYAPAEVPK True NCI_RA007_Epitope_Rep5 1031.5287606873098 1031.52766993586 28.651 2 0.18499613515047486 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENST00000460124.5_1_10:5042672-5046051:-|nuORF', 'ENSG00000187134|ENST00000380872|AKR1C1', 'ENST00000477661.1_1_10:5005492-5009304:+|nuORF', 'nc|ENSG00000151632|P52895-2|AKR1C2'] 21151 20805 ERDTYMLLL True PC9_epitope_Rep2 1152.58489566444 1152.58378993586 85.468 2 0.1849907347004224 0.0006801564359802754 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 135605 8155 YEEM[Oxidation]GIKPP True H1975_Epitope_Rep2 1078.5004977145798 1078.49940993586 36.318 2 0.1849893981951527 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 104088 15881 SRVDLSNVL True PC9_epitope_Rep4 1001.5505587610501 1001.54946993586 69.017 2 0.18498724696184704 0.0006801564359802754 0.9438714419765777 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000196873|Q5JTY5-2|ZNG1C', 'ENST00000382436.3_9:42674366-42714533:+|nuORF', 'ENST00000456188.5_1_2:114214762-114253317:+|nuORF'] 35261 10661 GSLNWVPVTK True NCI_RA007_Epitope_Rep4 1099.6025943339098 1099.6014899358602 47.856 2 0.18498211953857216 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE'] 7280 22630 ARPPWMWVL True PC9_epitope_Rep3 1154.60590589254 1154.6048099358602 92.315 2 0.18497402729857848 0.0006801564359802754 0.9438714419765777 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 87348 8262 QTDDTWRTEY True H1975_Epitope_Rep2 1313.55240923585 1313.5513099358602 36.731 2 0.1849725628694109 0.0006801564359802754 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 90453 14756 RISLPLPNF True NCI_RA007_Epitope_Rep3 1055.61276509479 1055.6116699358602 65.457 2 0.18497130986583685 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 139944 19094 YVIDPIKGLKL True PC9_epitope_Rep4 1257.7696596590097 1257.7680149037901 81.536 3 0.18496741371585781 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 132796 17651 VYSQIPAAVKL True PC9_epitope_Rep5 1187.6914093383098 1187.6903099358601 72.907 2 0.18496563364787363 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 14944 22989 DYNFVFTSF True PC9_epitope_Rep4 1138.49712620586 1138.4960299358602 96.646 2 0.18496550560168445 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000123505|P17707-2|AMD1', 'ENSG00000123505|ENST00000368885|AMD1'] 138583 19758 YRPPELLL True PC9_epitope_Rep5 999.5753169569099 999.57420993586 81.042 2 0.1849630665542403 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 136884 15351 YIYKDTIQV True PC9_epitope_Rep5 1141.60192562757 1141.60082993586 64.057 2 0.1849489012279246 0.0006801564359802754 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 54350 9210 KYQEVTNNL True PC9_epitope_Rep5 1107.5560380643099 1107.5549499358601 40.372 2 0.18494833622898418 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 32023 8833 GEVFKTYNV True H1975_Epitope_Rep1 1055.5287606873098 1055.52766993586 38.898 2 0.18493442178231895 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 7697 9285 ASQELWLNH True NCI_RA007_Epitope_Rep3 1096.53015766964 1096.5290699358602 43.628 2 0.18492895749433455 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574', 'ZNF574|p.Q224Sfs*144|1|0.3|ENSG00000105732|chr19:42079275-42079275|C/-|frameshift_variant'] 129222 8934 VTDLAGNEY True H1975_Epitope_Rep2 980.4450906330001 980.44454496793 39.324 1 0.18492781262395022 0.0006801564359802754 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 77213 11709 NYIDKVRFL True NCI_RA007_Epitope_Rep4 1166.64479349906 1166.64368993586 52.007 2 0.18490402918434468 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 11824 18363 DHMRFISEL True PC9_epitope_Rep1 1146.54917886206 1146.5480899358602 75.424 2 0.18489989527601502 0.0006801564359802754 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 59732 5313 LGVIEDHSNR True PC9_epitope_Rep3 1138.5730851107799 1138.57144490379 25.513 3 0.18488045340738588 0.0006801564359802754 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 40677 6223 HTLNQIDSVK True PC9_epitope_Rep1 1153.6091362663299 1153.60802993586 28.751 2 0.1848795827927732 0.0006801564359802754 0.9438714419765777 ['CON__P12763'] 83765 15440 QEEDFVLQV True H1975_Epitope_Rep2 1105.5291546101298 1105.52804993586 64.547 2 0.18487504697264795 0.0006801564359802754 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 53216 8172 KTDKTLVLL True NCI_RA007_Epitope_Rep3 1029.6433965167298 1029.6422899358602 39.265 2 0.18486477612805355 0.0006801564359802754 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 69277 19457 LVPEFVHSI True PC9_epitope_Rep3 1039.57023157647 1039.56912993586 80.069 2 0.18486470576563863 0.0006801564359802754 0.9438714419765777 ['ENSG00000115183|ENST00000263635|TANC1', 'nc|ENSG00000115183|Q9C0D5-2|TANC1'] 63876 20576 LPVEFTIDA True PC9_epitope_Rep4 1003.52261267771 1003.52207496793 87.298 1 0.18484136592832218 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 17678 20486 EHSIATLLL True PC9_epitope_Rep5 995.56514619603 995.56404993586 83.838 2 0.1848367416156772 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 138860 4714 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 23.258 2 0.18483641783928992 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 107345 17498 SYRQVAFDF True PC9_epitope_Rep4 1131.5349086969097 1131.53380993586 75.307 2 0.1848284253327092 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 110049 16982 THYDHVLIEL True PC9_epitope_Rep2 1238.6295373577398 1238.62844993586 70.567 2 0.18482633901542303 0.0006801564359802754 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 97132 7496 SFETTEESLR True NCI_RA007_Epitope_Rep3 1197.55134660669 1197.5502499358602 36.609 2 0.1848258311108114 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 88324 15804 QYLNKNALTTL True PC9_epitope_Rep2 1277.6979512707298 1277.6968499358602 66.05 2 0.18482559899406234 0.0006801564359802754 0.9438714419765777 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant'] 104478 5330 SSNDWNVEK True NCI_RA007_Epitope_Rep4 1077.47270236317 1077.4716099358602 27.067 2 0.18482202457402816 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 110224 7937 TIEIITDR True NCI_RA007_Epitope_Rep3 959.52876068731 959.52766993586 38.329 2 0.18482090911816437 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 107032 22888 SYLPFTEAF True PC9_epitope_Rep1 1073.5069626135698 1073.5058699358601 92.834 2 0.18481164403544703 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 23747 23654 EYIQFVPLL True PC9_epitope_Rep3 1120.6168474157198 1120.61574993586 96.271 2 0.18481043040546566 0.0006801564359802754 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 14915 16244 DYKNTFPKW True PC9_epitope_Rep1 1197.5818588893299 1197.5807699358602 67.3 2 0.18480360641944948 0.0006801564359802754 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1'] 88873 7346 REAEIYQTV True H1975_Epitope_Rep2 1107.5560380643099 1107.5549499358601 33.197 2 0.18480146368148956 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant'] 38477 14651 HHALPITDL True PC9_epitope_Rep3 1015.54507945779 1015.5439899358599 61.489 2 0.18480064126085374 0.0006801564359802754 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 73975 8598 NHNSQVWRV True PC9_epitope_Rep3 1138.5631891334199 1138.56154490379 38.022 3 0.18479921641270436 0.0006801564359802754 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 115445 11298 TVFLSTWNK True NCI_RA007_Epitope_Rep4 1094.5760452329 1094.57494993586 50.354 2 0.18479807853224725 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF'] 39981 11340 HQQSIPAVL True PC9_epitope_Rep6 991.5450794577898 991.5439899358599 54.656 2 0.18479399939733535 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 4762 4809 ALEENNNFSK True NCI_RA007_Epitope_Rep1 1164.54111627616 1164.54000993586 22.787 2 0.18478793009530325 0.0006801564359802754 0.9438714419765777 ['ENSG00000104435|ENST00000220876|STMN2', 'nc|ENSG00000104435|Q93045-2|STMN2'] 26555 9489 FIVNTNVPR True NCI_RA007_Epitope_Rep1 1058.58727862294 1058.5861899358601 40.905 2 0.18478232930003444 0.0006801564359802754 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 3795 8281 AGVLAHLEEER True NCI_RA007_Epitope_Rep1 1222.6305999868998 1222.6289549037901 36.211 3 0.18477832610758152 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 26058 10499 FHDNSGDVF True PC9_epitope_Rep4 1036.4250238947598 1036.42392993586 48.105 2 0.1847723695006421 0.0006801564359802754 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 73979 19635 NHQDVAGVFAL True PC9_epitope_Rep1 1169.58292151849 1169.58182993586 80.351 2 0.1847709846113316 0.0006801564359802754 0.9438714419765777 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 84056 8896 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 39.189 2 0.18476869179030508 0.0006801564359802754 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 8642 17141 AVAQALEVIPR True PC9_epitope_Rep3 1165.68190728377 1165.68080993586 71.089 2 0.18476725919122336 0.0006801564359802754 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 1413 8506 AEEGFTQVT True H1975_Epitope_Rep3 980.4450906329998 980.44398993586 37.704 2 0.1847663875381332 0.0006801564359802754 0.9438714419765777 ['ENSG00000115946|ENST00000263657|PNO1'] 23892 8533 EYMKHTRLF True PC9_epitope_Rep4 1223.6121134717898 1223.61046490379 40.299 3 0.18476214709174282 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 1894 13486 AEILELAGNAA True H1975_Epitope_Rep1 1070.5607890915799 1070.5596899358602 56.993 2 0.1847544746609219 0.0006801564359802754 0.9438714419765777 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 93805 20165 RVADILTQL True PC9_epitope_Rep3 1027.60259433391 1027.6014899358602 82.819 2 0.18474724708782184 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 89342 7084 REM[Oxidation]EENFAV True H1975_Epitope_Rep3 1139.49172393603 1139.4906299358602 32.216 2 0.18473724715517778 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 39679 10835 HPTEDLVVSA True PC9_epitope_Rep5 1066.5294889632999 1066.52838993586 46.664 2 0.18473702940301506 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 28886 13412 FTDVNSILRY True H1975_Epitope_Rep2 1226.62953735774 1226.62844993586 56.724 2 0.18471976785484717 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 104854 11360 STEQFQEYY True H1975_Epitope_Rep2 1193.48768372097 1193.4865899358601 48.745 2 0.18471352872102148 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 75816 17643 NRDELELEL True PC9_epitope_Rep4 1129.5615173675699 1129.5604299358602 75.885 2 0.1846962969356809 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 138828 8720 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 38.502 2 0.18469365606219923 0.0006801564359802754 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 33169 5976 GKSTISTEL True NCI_RA007_Epitope_Rep5 934.49712620586 934.49602993586 29.67 2 0.18469113965933934 0.0006801564359802754 0.9438714419765777 ['ENSG00000095906|ENST00000262302|NUBP2', 'ENST00000566447.5_1_16:1832991-1836957:+|nuORF', 'ENST00000566090.5_1_16:1832991-1836988:+|nuORF', 'NUBP2|p.K115Sfs*31|1|0.24|ENSG00000095906|chr16:1787684-1787684|A/-|frameshift_variant', 'NUBP2|p.L37V|1|0.22|ENSG00000095906|chr16:1786629-1786629|C/G|missense_variant', 'ENST00000568706.1_1_16:1834024-1837680:+|nuORF'] 54380 17622 KYQIINEEF True PC9_epitope_Rep5 1182.5920892198599 1182.59098993586 72.794 2 0.18468960220688208 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 97872 19098 SHLDYDITL True PC9_epitope_Rep5 1075.5185899264302 1075.51807496793 78.49 1 0.1846890370399392 0.0006801564359802754 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 67561 7930 LTEQYNEQY True H1975_Epitope_Rep1 1186.51423282198 1186.51367496793 35.454 1 0.184687112707153 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 88242 18658 QYEEQFVTL True PC9_epitope_Rep6 1155.5448046742697 1155.54370993586 84.411 2 0.18468237650057284 0.0006801564359802754 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 2340 4432 AEQDPDELNKA True H1975_Epitope_Rep3 1228.55716026312 1228.55657496793 22.17 1 0.184679209844646 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 109672 13506 THEDGVLEL True PC9_epitope_Rep4 1011.48728979815 1011.48618993586 59.847 2 0.1846745945934213 0.0006801564359802754 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 65305 8113 LSEKPTVTTVY True H1975_Epitope_Rep2 1236.6601687796801 1236.65906993586 36.156 2 0.18467212424158988 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105854|Q15165-3|PON2', 'nc|ENSG00000105854|Q15165-1|PON2', 'ENSG00000105854|ENST00000222572|PON2'] 17508 8584 EHINEGETAM[Oxidation]L True PC9_epitope_Rep2 1258.5499670881397 1258.54886993586 38.379 2 0.18466839930458065 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 83978 5524 QELQLKEA True NCI_RA007_Epitope_Rep3 957.5131106231698 957.51200993586 28.727 2 0.184664949048597 0.0006801564359802754 0.9438714419765777 ['ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 37309 13097 GVVPTIQKV True PC9_epitope_Rep3 939.5753169569098 939.57420993586 55.402 2 0.18466482205967516 0.0006801564359802754 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 7961 17048 ATDLAYYLV True H1975_Epitope_Rep2 1027.52261267771 1027.5215099358602 70.833 2 0.18466284645583395 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL', 'ASL|p.R379L|1|0.21|ENSG00000126522|chr7:66092079-66092079|G/T|missense_variant'] 75641 14233 NQSEKIFSL True PC9_epitope_Rep6 1064.55022440788 1064.54912993586 66.636 2 0.18466256693146973 0.0006801564359802754 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426'] 116742 9784 TYLEKAIKI True NCI_RA007_Epitope_Rep2 1077.6433965167298 1077.6422899358602 42.679 2 0.18466151365943964 0.0006801564359802754 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 29996 3628 FYGDEEKDK True NCI_RA007_Epitope_Rep2 1129.4927691014097 1129.49113490379 18.763 3 0.18466126781327302 0.0006801564359802754 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 83903 10089 QEISHLIEP True NCI_RA007_Epitope_Rep1 1064.55022440788 1064.54912993586 43.253 2 0.18465720868666172 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 140703 20424 YYQEYPMSI True PC9_epitope_Rep3 1192.5110620178398 1192.50996993586 83.814 2 0.1846533390704734 0.0006801564359802754 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 106528 14107 SVVSDILFK True NCI_RA007_Epitope_Rep5 1006.5698972233 1006.56880993586 60.953 2 0.18464935014321085 0.0006801564359802754 0.9438714419765777 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-3|TBC1D2B', 'ENST00000472786.1_1_15:78295640-78309087:-|nuORF'] 22132 10270 ESYSIYVYK True NCI_RA007_Epitope_Rep2 1150.55464108198 1150.55354993586 44.541 2 0.18464833503256278 0.0006801564359802754 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 96211 7084 SEELQSVQA True H1975_Epitope_Rep2 989.4665543535699 989.46544993586 32.18 2 0.18464617236211378 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF', 'ENST00000486527.6_1_2:25016788-25037388:+|nuORF', 'ENST00000498362.1_1_2:25016366-25039516:+|nuORF'] 89347 8795 REMEENFAV True H1975_Epitope_Rep3 1123.49680893603 1123.49570993586 38.836 2 0.184641848463354 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 140856 22066 YYTEFPTVL True PC9_epitope_Rep5 1131.54882742555 1131.5477299358602 89.904 2 0.18464053859432353 0.0006801564359802754 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 30003 18847 FYGPQVNNI True PC9_epitope_Rep3 1050.51344497634 1050.5123499358601 77.717 2 0.18463974014720363 0.0006801564359802754 0.9438714419765777 ['ENSG00000106299|ENST00000223023|WASL'] 90340 17098 RIIDVVYNA True PC9_epitope_Rep1 1061.58694426977 1061.58584993586 70.593 2 0.18463915987212656 0.0006801564359802754 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 20995 5631 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 27.044 2 0.18463612028804668 0.0006801564359802754 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 38015 9508 HEIESLYTKL True NCI_RA007_Epitope_Rep4 1231.6448530687098 1231.6437499358601 43.424 2 0.1846354982795444 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 4427 19497 AIVDLIHDI True PC9_epitope_Rep6 1007.5651461960299 1007.56404993586 87.657 2 0.18463143838376786 0.0006801564359802754 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 96846 21341 SESPIVVVL True PC9_epitope_Rep2 941.5433481222899 941.54279496793 87.554 1 0.18462780932458991 0.0006801564359802754 0.9438714419765777 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 135860 12160 YEQVREWFA True H1975_Epitope_Rep2 1226.5720224816198 1226.57092993586 51.858 2 0.1846277984712337 0.0006801564359802754 0.9438714419765777 ['ENSG00000165156|ENST00000395571|ZHX1'] 48377 9265 KEAIETIVAA True H1975_Epitope_Rep2 1043.5862755634298 1043.5851699358602 40.593 2 0.18462700972900897 0.0006801564359802754 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 39957 13125 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5439899358599 55.353 2 0.18462664488866062 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 17554 12091 EHIQNIM[Oxidation]TL True PC9_epitope_Rep5 1113.54884488933 1113.54774993586 51.503 2 0.18462317354020102 0.0006801564359802754 0.9438714419765777 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 114217 8902 TRVQSVEQI True PC9_epitope_Rep5 1058.5720224816198 1058.57092993586 39.185 2 0.18461994520097658 0.0006801564359802754 0.9438714419765777 ['ENSG00000175029|ENST00000309035|CTBP2', 'CTBP2|p.Y212Lfs*38|1|0.35|ENSG00000175029|chr10:124994615-124994616|-/G|frameshift_variant', 'nc|ENSG00000175029|P56545|CTBP2', 'nc|ENSG00000175029|P56545-3|CTBP2', 'ENST00000486955.2_1_10:126686512-126691658:-|nuORF', 'nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1'] 8290 9336 ATLAAVLQR True NCI_RA007_Epitope_Rep4 941.56581490237 941.56470993586 42.767 2 0.1846186413046209 0.0006801564359802754 0.9438714419765777 ['ENSG00000159399|ENST00000290573|HK2', 'HK2|p.L795Rfs*10|1|0.41|ENSG00000159399|chr2:74889253-74889262|TGGCCCTGCT/-|frameshift_variant'] 140844 14430 YYTDIM[Oxidation]HTL True PC9_epitope_Rep2 1171.5219614351497 1171.5208699358602 60.773 2 0.18461668342328144 0.0006801564359802754 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 132960 16420 VYTYIQSRF True PC9_epitope_Rep5 1175.5975089534697 1175.59640993586 68.16 2 0.1846082118934876 0.0006801564359802754 0.9438714419765777 ['DYRK4|p.R355Kfs*16|1|0.21|ENSG00000010219|chr12:4610195-4610196|-/A|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 93707 18054 RTMENLVEL True PC9_epitope_Rep1 1103.5644945730298 1103.5633899358602 74.239 2 0.1846066820961778 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 81798 11589 PSEYDTPLY True H1975_Epitope_Rep3 1083.47605640811 1083.47547496793 49.707 1 0.18460477763384614 0.0006801564359802754 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3', 'SETD3|p.Y313Lfs*18|1|0.19|ENSG00000183576|chr14:99405358-99405359|-/A|frameshift_variant'] 504 6661 AAPGAEFAPNK True PC9_epitope_Rep4 1071.5349086969097 1071.53380993586 32.795 2 0.18460273448235032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 49359 18597 KIFSGVFVKV True PC9_epitope_Rep5 1122.68011637862 1122.6790099358602 76.558 2 0.1846005774506497 0.0006801564359802754 0.9438714419765777 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 136523 18316 YHQDAFMQL True PC9_epitope_Rep1 1151.5069796969099 1151.50588993586 75.242 2 0.1845970652284477 0.0006801564359802754 0.9438714419765777 ['ENSG00000170852|ENST00000304056|KBTBD2'] 24099 14963 EYRPEFSNF True PC9_epitope_Rep6 1187.5247379360299 1187.52364993586 69.566 2 0.18459359814698292 0.0006801564359802754 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 104863 15174 STEQIPILY True H1975_Epitope_Rep2 1062.5597264624198 1062.55917496793 63.522 1 0.1845912153617902 0.0006801564359802754 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 117069 12996 TYQSITERI True PC9_epitope_Rep5 1109.57168812845 1109.5705899358602 54.998 2 0.18458877776130952 0.0006801564359802754 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.E327Gfs*21|1|0.11|ENSG00000131558|chr7:133356539-133356540|-/G|frameshift_variant'] 1898 13559 AEILELAGNAA True H1975_Epitope_Rep2 1070.5607890915799 1070.56027496793 57.292 1 0.1845835443288675 0.0006801564359802754 0.9438714419765777 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 83173 10430 PYTKVEESF True PC9_epitope_Rep4 1098.5233409536997 1098.5222499358601 47.829 2 0.1845825268344788 0.0006801564359802754 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 12028 14259 DIDEVSSLLR True NCI_RA007_Epitope_Rep1 1145.59281749585 1145.59172993586 59.5 2 0.18458122711973224 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 70223 21231 LYLPTLTHF True PC9_epitope_Rep3 1103.6015317047502 1103.6004299358601 86.956 2 0.1845804152332751 0.0006801564359802754 0.9438714419765777 ['ENST00000537473.2_1_12:57058103-57058217:-|nuORF'] 131746 17897 VYAALQRQLL True PC9_epitope_Rep1 1173.6869926642098 1173.6858899358601 73.633 2 0.18458017557503528 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 85016 20433 QIFNGTFVKL True PC9_epitope_Rep5 1165.64954452633 1165.64844993586 83.632 2 0.18458015374619816 0.0006801564359802754 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 66482 6659 LSRSVLFTK True NCI_RA007_Epitope_Rep5 1049.62332977849 1049.62222993586 32.283 2 0.18457110953037195 0.0006801564359802754 0.9438714419765777 ['ENSG00000142556|ENST00000270649|ZNF614'] 7075 18098 AQWDIGIAHA True PC9_epitope_Rep3 1080.53524305008 1080.5341499358601 74.81 2 0.18456684280943966 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'WHSC1L1-DDHD2|2|fusion', 'nc|ENSG00000147548|Q9BZ95-2|NSD3', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion', 'WHSC1L1-C15orf55|1|fusion', 'WHSC1L1-DDHD2|1|fusion'] 134919 7726 YADYSGQQSTY True H1975_Epitope_Rep1 1281.51496109797 1281.5138699358602 34.679 2 0.1845658325710813 0.0006801564359802754 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL'] 29633 22236 FVLPILQKL True PC9_epitope_Rep1 1069.68995278633 1069.6888499358602 90.353 2 0.1845543041578916 0.0006801564359802754 0.9438714419765777 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 77402 12757 NYLVLPNRI True NCI_RA007_Epitope_Rep4 1100.63422881536 1100.63312993586 56.128 2 0.18455303630978387 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 24759 15486 FAYDGKDYL True PC9_epitope_Rep6 1090.4971262058598 1090.4960299358602 71.738 2 0.18455213720314104 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 21778 13253 ESDFSNPLY True H1975_Epitope_Rep2 1070.4556553167 1070.45454993586 56.107 2 0.18455184637986424 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 6134 14593 APNPIHLTV True PC9_epitope_Rep2 960.53926580136 960.53816993586 61.401 2 0.18454859436688392 0.0006801564359802754 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F', 'ENST00000530219.1_1_11:8014470-8016722:+|nuORF'] 113480 8439 TQSEKQFVV True PC9_epitope_Rep2 1064.55022440788 1064.54912993586 37.83 2 0.18454602502289652 0.0006801564359802754 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 84676 18539 QHFDPVIQL True PC9_epitope_Rep4 1095.5712942056298 1095.57018993586 79.385 2 0.18454581496367325 0.0006801564359802754 0.9438714419765777 ['ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 105656 4805 SVFQTTDTK True NCI_RA007_Epitope_Rep3 1025.5029398622898 1025.50184993586 25.866 2 0.18454499476157157 0.0006801564359802754 0.9438714419765777 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC', 'nc|ENSG00000153130|Q9UIL1-4|SCOC'] 115474 19880 TVFTDHMLTV True PC9_epitope_Rep3 1162.5692456002998 1162.5681499358602 81.707 2 0.18454477718519371 0.0006801564359802754 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 132163 8584 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5281849037901 40.498 3 0.1845392009262839 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 17018 12802 EGLPVALDK True PC9_epitope_Rep2 940.5229470308799 940.52184993586 54.544 2 0.18453430026682324 0.0006801564359802754 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000427559.1_1_2:112698001-112698598:-|nuORF'] 88340 18417 QYLQDAYSF True PC9_epitope_Rep6 1133.5029398622898 1133.50184993586 83.486 2 0.18453007079751368 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 26538 7823 FIVGADNVGSK True H1975_Epitope_Rep3 1105.57677350889 1105.57566993586 35.07 2 0.18452524439588147 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 5374 7471 ALTSELANAR True NCI_RA007_Epitope_Rep2 1044.55637241748 1044.55526993586 33.689 2 0.18452415799473681 0.0006801564359802754 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 118883 5640 VEEPENPAA True H1975_Epitope_Rep2 954.4294405688598 954.4288949679301 26.694 1 0.18452318151702024 0.0006801564359802754 0.9438714419765777 ['ENSG00000171316|ENST00000423902|CHD7'] 48164 12351 KASDLYITL True NCI_RA007_Epitope_Rep4 1022.56481184286 1022.56370993586 54.504 2 0.18451952518280754 0.0006801564359802754 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2'] 1066 19454 AEALPLPLLP True H1975_Epitope_Rep3 1032.6219327961599 1032.62082993586 81.534 2 0.18451888424476767 0.0006801564359802754 0.9438714419765777 ['ENST00000256190.12_1_11:10315695-10315752:-|nuORF'] 200 10215 AAFEKALEV True NCI_RA007_Epitope_Rep4 976.5229470308798 976.52184993586 46.148 2 0.18451798095175848 0.0006801564359802754 0.9438714419765777 ['ENSG00000152778|ENST00000371795|IFIT5'] 120034 7894 VFEDAAEIR True H1975_Epitope_Rep1 1048.5189242795998 1048.5178299358602 35.317 2 0.18451718129765224 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 45208 15326 IRKPYIWEY True PC9_epitope_Rep2 1266.67609362734 1266.6744449037901 64.232 3 0.18451704424541143 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 116591 19103 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 81.571 2 0.1845168179718857 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 91645 10400 RPFQGTMGV True PC9_epitope_Rep4 991.4909357099498 991.48982993586 47.706 2 0.18450711772100614 0.0006801564359802754 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 17043 5705 EGM[Oxidation]NIVEAM[Oxidation]ER True NCI_RA007_Epitope_Rep2 1309.5642376337298 1309.5631299358602 26.806 2 0.1845054847324473 0.0006801564359802754 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 94073 14406 RVVDLLNQA True PC9_epitope_Rep2 1026.5821932425 1026.58108993586 60.678 2 0.18449381136091383 0.0006801564359802754 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 2093 11902 AELNAQIITA True H1975_Epitope_Rep3 1042.56587447202 1042.56476993586 50.933 2 0.18449177905998276 0.0006801564359802754 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 1815 4290 AEIDNIKNQRA True H1975_Epitope_Rep3 1270.6629627443401 1270.66132490379 21.617 3 0.18448912809265905 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 76286 15426 NSDPNLHLL True PC9_epitope_Rep5 1021.5192586327701 1021.51816993586 64.345 2 0.1844790353190856 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 77379 11724 NYLSHHLTI True PC9_epitope_Rep4 1096.5665431783602 1096.5654499358602 52.857 2 0.1844781749996664 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 94358 17811 RYALQLQQI True PC9_epitope_Rep5 1131.64004247179 1131.6389499358602 73.529 2 0.18447628360113685 0.0006801564359802754 0.9438714419765777 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant'] 69900 9569 LYDAYELK True NCI_RA007_Epitope_Rep1 1013.50696261357 1013.50586993586 41.22 2 0.18447553204674536 0.0006801564359802754 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 40458 9915 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46561496793 43.126 1 0.1844711226788235 0.0006801564359802754 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 109883 14028 THNIIVNQL True PC9_epitope_Rep1 1050.5821932425 1050.58108993586 58.797 2 0.18446784968801383 0.0006801564359802754 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 94671 7935 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.6154299358602 37.212 2 0.18446700603164204 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 21036 10705 ERDAYVQAL True PC9_epitope_Rep4 1063.52982331647 1063.5287299358602 48.928 2 0.18446118828490463 0.0006801564359802754 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 95995 11487 SEAFSINFR True H1975_Epitope_Rep1 1069.51925863277 1069.5181699358602 49.168 2 0.18445224574635705 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 75505 19937 NQITQLESL True PC9_epitope_Rep2 1044.54513902744 1044.5440499358601 82.084 2 0.18445087642937114 0.0006801564359802754 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 40683 4613 HTLNQIDSVK True PC9_epitope_Rep4 1153.6091362663299 1153.60802993586 24.254 2 0.18443685182336794 0.0006801564359802754 0.9438714419765777 ['CON__P12763'] 41166 18565 HYSPIYLSF True PC9_epitope_Rep6 1125.5494961318898 1125.54838993586 84.05 2 0.1844360681050775 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 23739 19967 EYIPKWEQF True PC9_epitope_Rep5 1238.5971746003 1238.5960699358602 81.854 2 0.18443408613739698 0.0006801564359802754 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 94357 16265 RYALQLQQI True PC9_epitope_Rep4 1131.64004247179 1131.6389499358602 70.516 2 0.18443264081328808 0.0006801564359802754 0.9438714419765777 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant'] 77343 22248 NYLDRFLSL True PC9_epitope_Rep1 1139.59750895347 1139.59640993586 90.394 2 0.18442750985120807 0.0006801564359802754 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 89224 8298 REIQEAIAVA True NCI_RA007_Epitope_Rep4 1098.6033226098998 1098.6022299358601 38.728 2 0.18441936910609036 0.0006801564359802754 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 129306 10817 VTDSGPTFNY True H1975_Epitope_Rep3 1099.4822044177101 1099.48110993586 46.686 2 0.18441709136567783 0.0006801564359802754 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 103642 14254 SRDLSSQLL True PC9_epitope_Rep3 1017.54547338061 1017.54436993586 59.914 2 0.18441367732173705 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 86518 14678 QRALLANAL True PC9_epitope_Rep1 968.5767139392399 968.57560993586 61.281 2 0.18440930866101007 0.0006801564359802754 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 47378 20225 IYIDRFEDL True PC9_epitope_Rep5 1182.5920892198599 1182.59098993586 82.842 2 0.18440771515192528 0.0006801564359802754 0.9438714419765777 ['ENSG00000152219|ENST00000282032|ARL14EP'] 106291 9458 SVQVPEFTPK True NCI_RA007_Epitope_Rep4 1130.5971746003 1130.5960699358602 43.238 2 0.18440341158723442 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 129183 10771 VTDFPGFDER True H1975_Epitope_Rep1 1181.5353026197297 1181.5342099358602 46.392 2 0.18440163039606755 0.0006801564359802754 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 129079 9834 VTARIALQY True H1975_Epitope_Rep2 1033.59202965021 1033.59092993586 42.812 2 0.18440036375766924 0.0006801564359802754 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH'] 22149 8951 ESYSVYVYK True NCI_RA007_Epitope_Rep5 1136.5389910178399 1136.5378899358602 41.09 2 0.18439805637857226 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 9825 19534 AYLKGTVLF True PC9_epitope_Rep1 1010.5800679841799 1010.57896993586 79.96 2 0.18439221564082708 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 11739 8094 DHHENKYLL True PC9_epitope_Rep5 1167.56727145435 1167.5661699358602 36.072 2 0.1843835657993559 0.0006801564359802754 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 28370 14016 FSDLYNEVY True H1975_Epitope_Rep3 1148.50260550912 1148.5015099358602 59.233 2 0.18438160304774934 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 117455 12764 VADTVARVL True PC9_epitope_Rep3 942.5498304850598 942.54872993586 54.116 2 0.18438151152327784 0.0006801564359802754 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 69965 19935 LYEKDIQLF True PC9_epitope_Rep5 1167.6175756917098 1167.61646993586 81.734 2 0.184369716407583 0.0006801564359802754 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 120512 17116 VFYPYPQYF True NCI_RA007_Epitope_Rep3 1222.5698972232997 1222.5688099358601 75.196 2 0.18435704568073 0.0006801564359802754 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 104974 21529 STIANVWLV True PC9_epitope_Rep4 1001.55458151233 1001.55348993586 90.991 2 0.18435300846918573 0.0006801564359802754 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 40483 11091 HSELLEDYY True H1975_Epitope_Rep1 1167.50841916555 1167.50732993586 47.625 2 0.18434496427863892 0.0006801564359802754 0.9438714419765777 ['ENSG00000117528|ENST00000370214|ABCD3'] 43312 11972 IHEPEPHIL True PC9_epitope_Rep3 1083.57129420563 1083.57018993586 51.073 2 0.18434046280754351 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 38730 2834 HHTFYNELR True NCI_RA007_Epitope_Rep1 1215.57850484439 1215.57685490379 14.848 3 0.1843369559764327 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 132136 6922 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5281849037901 33.31 3 0.18432345497650415 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 124264 18572 VLDDKLYVV True PC9_epitope_Rep3 1062.5961119711399 1062.5950099358602 76.662 2 0.1843206785354532 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 75859 8877 NRDMTTAEI True PC9_epitope_Rep3 1049.48115887189 1049.48006993586 39.095 2 0.18431684991350208 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'nc|ENSG00000068885|Q9P2H3-2|IFT80', 'ENSG00000068885|ENST00000326448|IFT80'] 91541 19557 RPADVIFATV True PC9_epitope_Rep3 1087.60259433391 1087.6014899358602 80.46 2 0.18431660513566475 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 67503 16039 LTELPDWSY True H1975_Epitope_Rep1 1122.5233409537 1122.5222499358601 67.032 2 0.18431175639202077 0.0006801564359802754 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 35646 5075 GTMKAQGVLLK True NCI_RA007_Epitope_Rep3 1144.6638146914797 1144.66216490379 26.955 3 0.18430909394634706 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166482|P55083-2|MFAP4'] 88454 15692 QYVDFHNQL True PC9_epitope_Rep3 1162.54072235334 1162.5396299358601 65.501 2 0.18429557717068681 0.0006801564359802754 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5', 'nc|ENSG00000134899|P28715-2|ERCC5'] 109846 10601 THLLNQDTL True PC9_epitope_Rep6 1053.54547338061 1053.54436993586 51.595 2 0.1842867252401491 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 37588 7413 GYSFTTTAER True NCI_RA007_Epitope_Rep2 1131.51965255559 1131.5185499358602 33.46 2 0.18428417128574487 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 94132 16396 RWFQPAIPSW True NCI_RA007_Epitope_Rep1 1286.6560268890996 1286.65492993586 67.889 2 0.18427967689068678 0.0006801564359802754 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 68827 7991 LVDTAGQDEY True H1975_Epitope_Rep3 1109.48768372097 1109.4871749679298 35.708 1 0.1842792787457566 0.0006801564359802754 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 74108 12538 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 53.098 2 0.18427927259685414 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 131931 18939 VYEYVVERF True PC9_epitope_Rep3 1202.5971746002995 1202.5960699358602 78.075 2 0.18427232892337722 0.0006801564359802754 0.9438714419765777 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 22251 4456 ETDPDAQAKAY True H1975_Epitope_Rep2 1207.5356965425499 1207.5345899358601 22.253 2 0.1842720057091304 0.0006801564359802754 0.9438714419765777 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 18362 20529 EIYKEFFEV True PC9_epitope_Rep2 1202.58594121026 1202.5848499358601 84.397 2 0.18427167927326565 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 88407 19167 QYQKVPVLF True PC9_epitope_Rep1 1120.6280808057597 1120.6269899358601 78.52 2 0.18426902778158852 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 45210 15334 IRKPYIWEY True PC9_epitope_Rep2 1266.67609362734 1266.6749899358601 64.262 2 0.1842575133795126 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 137476 22209 YLPELLQTV True PC9_epitope_Rep5 1074.5961119711399 1074.5950099358602 90.438 2 0.1842562255640545 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 103616 13675 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.59957490379 60.491 3 0.1842468397588558 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 127142 9967 VQDNPRALV True PC9_epitope_Rep1 1010.5508931142199 1010.54978993586 43.202 2 0.18424644878430896 0.0006801564359802754 0.9438714419765777 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89', 'KLHL24-CEP89|1|fusion'] 40180 9682 HRFPTVAV True PC9_epitope_Rep2 925.5133854066898 925.5122899358599 42.582 2 0.18424560064621615 0.0006801564359802754 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 119312 10856 VELQELNDR True PC9_epitope_Rep5 1114.5618517207397 1114.56074993586 46.745 2 0.18423441014152178 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 65105 8509 LSDPAAGAY True H1975_Epitope_Rep2 863.40249754503 863.40194496793 37.685 1 0.1842257479174072 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000557589.1_1_12:56815505-56817595:-|nuORF'] 64206 20573 LQIEDFEARI True PC9_epitope_Rep5 1232.6401020414398 1232.63900993586 84.181 2 0.1842248763241061 0.0006801564359802754 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 86516 6447 QRAITGASL True PC9_epitope_Rep6 915.5137793295099 915.51268993586 33.428 2 0.1842240605287859 0.0006801564359802754 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 127361 10239 VQPSKYHFL True PC9_epitope_Rep2 1117.5920296502102 1117.59092993586 44.719 2 0.18422323827247805 0.0006801564359802754 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 34727 7385 GQNPTEAEL True NCI_RA007_Epitope_Rep4 957.44033960573 957.43924993586 35.049 2 0.18422302695655296 0.0006801564359802754 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 87367 12829 QTDIQGALSAY True H1975_Epitope_Rep2 1165.5615173675699 1165.5604299358602 54.455 2 0.18421732896285892 0.0006801564359802754 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 85049 19137 QILDGVHYL True PC9_epitope_Rep2 1056.5603951687601 1056.55928993586 78.98 2 0.18421002437574446 0.0006801564359802754 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 70821 12208 MEENPGIFA True H1975_Epitope_Rep3 1006.4429824580199 1006.44247496793 52.13 1 0.18420697419169202 0.0006801564359802754 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1'] 128345 13790 VSDMVEDLY True H1975_Epitope_Rep3 1069.4637774722498 1069.46268993586 58.346 2 0.18420259641376097 0.0006801564359802754 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 102968 8759 SQIQEFKEA True PC9_epitope_Rep3 1078.5294889632999 1078.52838993586 38.645 2 0.1842025726080516 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 113624 13666 TRDAGYGGLSL True PC9_epitope_Rep4 1108.5512870370399 1108.55018993586 60.458 2 0.18420195203883888 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 138141 21431 YQLEIPENFTT True PC9_epitope_Rep5 1353.6452469915296 1353.64414993586 87.497 2 0.1841993917133589 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 104454 5482 SSLNLRET True NCI_RA007_Epitope_Rep4 918.47705946762 918.47596993586 27.671 2 0.18419760814710262 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'VIM|p.D429Y|1|0.25|ENSG00000026025|chr10:17236305-17236305|G/T|missense_variant'] 41126 21197 HYPDFLVQI True PC9_epitope_Rep3 1130.5760452328998 1130.57494993586 86.825 2 0.18419246237257897 0.0006801564359802754 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 103392 15345 SQWDSPMRV True PC9_epitope_Rep1 1104.5022286696399 1104.50112993586 63.843 2 0.18418480578670163 0.0006801564359802754 0.9438714419765777 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 54190 12713 KYPDRVPVI True PC9_epitope_Rep1 1085.62332977849 1085.62222993586 53.773 2 0.18418207682380994 0.0006801564359802754 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 91882 12405 RPNSLVGITSA True PC9_epitope_Rep5 1113.61422164677 1113.6131299358601 52.715 2 0.1841801239787667 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 94625 7614 RYLDKTEQW True NCI_RA007_Epitope_Rep1 1237.6091362663299 1237.60750490379 33.609 3 0.1841775998400937 0.0006801564359802754 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 32269 9762 GFQNALIVR True H1975_Epitope_Rep1 1016.5767139392399 1016.57560993586 42.479 2 0.18417486196318986 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 113780 16429 TRDQFLDTL True PC9_epitope_Rep4 1107.5560380643099 1107.5549499358601 71.155 2 0.18416547359982105 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 7762 10769 ASVFGTMPLK True NCI_RA007_Epitope_Rep3 1049.5579526406098 1049.55684993586 49.404 2 0.18416465989088354 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 38532 5815 HHEAGVTAL True PC9_epitope_Rep1 933.4668291370899 933.4657299358599 27.184 2 0.18416295501970484 0.0006801564359802754 0.9438714419765777 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 2274 18765 AEPLEIILHLP True H1975_Epitope_Rep1 1243.71762408615 1243.71652993586 78.242 2 0.1841627533355891 0.0006801564359802754 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 6832 19085 AQIDHYLGL True PC9_epitope_Rep1 1028.52909504048 1028.5279899358602 78.201 2 0.18416235805692444 0.0006801564359802754 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 93654 10089 RTFEKIEEV True PC9_epitope_Rep5 1149.60298825673 1149.60188993586 43.79 2 0.184159782148414 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 40057 16993 HQYDGLVEL True PC9_epitope_Rep2 1072.5189242795998 1072.5178299358602 70.612 2 0.18415971944863033 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 32074 7562 GEWERAAAV True NCI_RA007_Epitope_Rep4 987.4773938207898 987.47628993586 35.734 2 0.18415906765867915 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS', 'ENST00000493227.1_1_7:7622738-7646720:+|nuORF'] 34820 17361 GQVDMDIKL True PC9_epitope_Rep5 1017.51648175145 1017.51538993586 71.779 2 0.18415686856931332 0.0006801564359802754 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 13749 15555 DQLIYNLLK True NCI_RA007_Epitope_Rep1 1118.63356010902 1118.6324699358602 64.591 2 0.18415640173608355 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000469976.2_1_11:18418389-18418551:+|nuORF'] 26392 13132 FIIYDTHSL True NCI_RA007_Epitope_Rep2 1107.56006081559 1107.5589699358602 55.713 2 0.18415416901980766 0.0006801564359802754 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'ENST00000539652.1_1_12:66522892-66539669:-|nuORF'] 33911 11617 GM[Oxidation]DVAASEFFR True NCI_RA007_Epitope_Rep1 1244.54957316532 1244.54846993586 49.159 2 0.18415223905315162 0.0006801564359802754 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 21002 6620 ERAPGETAL True PC9_epitope_Rep5 942.4770594676199 942.47596993586 30.437 2 0.1841284853007666 0.0006801564359802754 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 70618 12547 MADPNIRFL True H1975_Epitope_Rep1 1075.54845058607 1075.5473499358602 53.306 2 0.18412780899989095 0.0006801564359802754 0.9438714419765777 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 81766 4222 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 21.357 3 0.18412703180730128 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 120254 11082 VFPDKGYSF True NCI_RA007_Epitope_Rep5 1058.5072969667401 1058.5061899358602 49.261 2 0.1841240676437842 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 2787 7527 AEVDRQVIP True H1975_Epitope_Rep2 1025.5505587610498 1025.54946993586 33.903 2 0.18412351550410394 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 123645 16092 VILPTVHEV True PC9_epitope_Rep1 1005.5858816406101 1005.58478993586 66.714 2 0.18412297969339786 0.0006801564359802754 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 24725 11653 FAYDGKDYL True NCI_RA007_Epitope_Rep1 1090.4971262058598 1090.4960299358602 49.3 2 0.18412190573320622 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 116376 8906 TVYSGEEKL True PC9_epitope_Rep1 1024.5076908895599 1024.5065899358601 39.096 2 0.18411622497440544 0.0006801564359802754 0.9438714419765777 ['ENSG00000166224|ENST00000373202|SGPL1'] 15200 7504 EAFNM[Oxidation]IDQNR True PC9_epitope_Rep4 1252.5506357944798 1252.5495299358602 36.229 2 0.1841146578560803 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 21161 12971 ERDYTYEEL True PC9_epitope_Rep2 1216.5247975056798 1216.52370993586 55.185 2 0.18410977382446925 0.0006801564359802754 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 77242 20221 NYIKDLNIL True PC9_epitope_Rep5 1104.61791004488 1104.6168099358601 82.827 2 0.184096214541064 0.0006801564359802754 0.9438714419765777 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 28877 9925 FTDVIGHY True H1975_Epitope_Rep2 950.4497820906199 950.44868993586 43.165 2 0.18408771629139487 0.0006801564359802754 0.9438714419765777 ['ENSG00000090432|ENST00000264198|MUL1'] 103513 16890 SRDAFGYATL True PC9_epitope_Rep5 1099.52982331647 1099.5287299358602 69.979 2 0.18406281239824396 0.0006801564359802754 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 59068 14928 LGDLYEEEMR True PC9_epitope_Rep1 1253.5598031154097 1253.5587099358602 62.243 2 0.18405780706134703 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 104222 10352 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 44.827 2 0.18403922141992857 0.0006801564359802754 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 28829 11868 FTDIDGQVY True H1975_Epitope_Rep2 1056.4763907612798 1056.47587496793 50.728 1 0.18403839949401973 0.0006801564359802754 0.9438714419765777 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 206 14311 AAFGRDLFL True H1975_Epitope_Rep2 1008.5392658013599 1008.53816993586 60.196 2 0.18403464835234667 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134759|Q6IA86-4|ELP2', 'nc|ENSG00000134759|Q6IA86-2|ELP2', 'nc|ENSG00000134759|Q6IA86-3|ELP2', 'nc|ENSG00000134759|Q6IA86-5|ELP2', 'ENSG00000134759|ENST00000358232|ELP2', 'nc|ENSG00000134759|Q6IA86-6|ELP2', 'ENST00000536373.5_1_18:33718798-33725056:+|nuORF'] 113299 13895 TQIDHYVGI True PC9_epitope_Rep4 1044.52400966004 1044.52290993586 61.348 2 0.1840198901861339 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 24094 17373 EYRPEFSNF True PC9_epitope_Rep1 1187.5247379360299 1187.52364993586 71.633 2 0.18401944204485365 0.0006801564359802754 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 31566 10106 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51676993586 43.811 2 0.18401742711163202 0.0006801564359802754 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 35850 17501 GVAANDVIVHI True PC9_epitope_Rep1 1106.6084079903399 1106.60730993586 72.112 2 0.18401702740238984 0.0006801564359802754 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 4291 5501 AIITPPPAK True NCI_RA007_Epitope_Rep5 906.5538532363399 906.55274993586 27.847 2 0.18400907369399408 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 21179 19284 EREPLIIAM True PC9_epitope_Rep5 1070.5794163611797 1070.57830993586 79.219 2 0.1840061357464029 0.0006801564359802754 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant'] 28581 11002 FSNPRALYL True H1975_Epitope_Rep3 1079.5763795860698 1079.5752899358602 47.408 2 0.18400172319348837 0.0006801564359802754 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.Q1049Lfs*8|1|0.14|ENSG00000120800|chr12:101327183-101327186|CCAA/-|frameshift_variant'] 4192 13780 AIDLFTDAIK True H1975_Epitope_Rep1 1105.60192562757 1105.60082993586 58.147 2 0.18400114090340558 0.0006801564359802754 0.9438714419765777 ['ENSG00000100380|ENST00000216218|ST13', 'nc|ENSG00000232150|Q8IZP2|ST13P4', 'ENST00000456632.1_1_X:92543289-92543514:-|nuORF', 'nc|ENSG00000212789|Q8NFI4|ST13P5'] 14040 9451 DSDEESLGY True H1975_Epitope_Rep2 1013.38254994609 1013.38144993586 41.32 2 0.1839921284006118 0.0006801564359802754 0.9438714419765777 ['ENSG00000119906|ENST00000238961|SLF2', 'nc|ENSG00000119906|Q8IX21-2|SLF2'] 49486 9545 KIYEGQVEV True PC9_epitope_Rep6 1063.55497543515 1063.5538699358601 47.0 2 0.18398964353237174 0.0006801564359802754 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 47074 16923 IVVDNVPQV True PC9_epitope_Rep4 981.5494961318899 981.54838993586 73.082 2 0.18398335524991208 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 9553 18472 AYALLLQHL True PC9_epitope_Rep6 1040.60186605792 1040.6007699358602 83.693 2 0.18398108086996465 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6'] 83764 15361 QEEDFVLQV True H1975_Epitope_Rep1 1105.5291546101298 1105.52804993586 64.355 2 0.18397335039686757 0.0006801564359802754 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 17327 8904 EHDPRVITV True PC9_epitope_Rep5 1064.56145779792 1064.56036993586 39.193 2 0.18397113583123864 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000102796|A0PJE2-2|DHRS12', 'ENSG00000102796|ENST00000444610|DHRS12', 'nc|ENSG00000102796|A0PJE2-3|DHRS12', 'nc|ENSG00000102796|A0PJE2|DHRS12'] 26254 18903 FIAKSFYDL True PC9_epitope_Rep4 1102.5698972233 1102.5688099358601 80.797 2 0.18397028145943017 0.0006801564359802754 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 132090 8428 VYIKHPVSL True PC9_epitope_Rep6 1054.61751612206 1054.61640993586 42.106 2 0.18396560927019928 0.0006801564359802754 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 35184 10477 GSDFYSMHY True H1975_Epitope_Rep3 1105.41749598617 1105.41638993586 45.362 2 0.18396396870881065 0.0006801564359802754 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 103443 12710 SRAEDYEVL True PC9_epitope_Rep3 1080.50875351872 1080.5076499358602 53.911 2 0.18396049620689645 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 42617 7194 IETIEVM[Oxidation]EDR True H1975_Epitope_Rep1 1249.58601824369 1249.5849299358601 32.691 2 0.18395953152590885 0.0006801564359802754 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 119358 5091 VENIQRVAA True NCI_RA007_Epitope_Rep5 998.5508931142198 998.54978993586 26.281 2 0.18395067522301883 0.0006801564359802754 0.9438714419765777 ['ENSG00000173801|ENST00000393931|JUP'] 35782 3867 GTVRIGVAK True NCI_RA007_Epitope_Rep4 899.5552502186698 899.55414993586 21.079 2 0.18394861036074442 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'MPDZ|p.S1510Efs*25|1|0.23|ENSG00000107186|chr9:13126713-13126714|-/A|frameshift_variant', 'ENST00000539508.5_1_9:13136054-13190160:-|nuORF'] 71129 18880 M[Oxidation]ETVWTILP True H1975_Epitope_Rep3 1104.55253328744 1104.5514299358601 79.19 2 0.1839419359823308 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 114377 9532 TSDHFETIMKY True H1975_Epitope_Rep2 1370.6176523446998 1370.6165499358601 41.637 2 0.18394167692005467 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 7979 4029 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 20.572 2 0.1839393173695618 0.0006801564359802754 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 136743 10353 YINPDLALEEK True H1975_Epitope_Rep1 1303.6659824361097 1303.6648899358602 44.77 2 0.18393832611177074 0.0006801564359802754 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1', 'ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 140592 16050 YYLTPDGQRF True PC9_epitope_Rep2 1258.59823722946 1258.5971499358602 66.993 2 0.1839376894107434 0.0006801564359802754 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 117417 10310 VADLVENSY True H1975_Epitope_Rep2 1008.4763907612801 1008.47587496793 44.663 1 0.18393619385946489 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 54139 18143 KYNANFVTF True PC9_epitope_Rep3 1102.54474510462 1102.54364993586 74.988 2 0.18393616550514283 0.0006801564359802754 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 8594 6694 AVAEPLPSPR True NCI_RA007_Epitope_Rep4 1035.5712942056298 1035.57018993586 32.372 2 0.1839357947520059 0.0006801564359802754 0.9438714419765777 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 52304 12140 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54290993586 51.558 2 0.18393088433222432 0.0006801564359802754 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 73638 18307 NGISDLVKV True PC9_epitope_Rep5 943.53384606775 943.53274993586 75.432 2 0.18391744274154423 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 113614 15158 TRDAGYGGLSL True PC9_epitope_Rep1 1108.5512870370399 1108.55018993586 63.127 2 0.18391612469259513 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 28936 6719 FTEPNRHFY True H1975_Epitope_Rep1 1209.5567067706497 1209.5550749037902 30.888 3 0.1839156659912918 0.0006801564359802754 0.9438714419765777 ['ENSG00000165355|ENST00000298097|FBXO33'] 11840 15228 DHMRFISEL True PC9_epitope_Rep6 1146.54917886206 1146.54754490379 70.672 3 0.1839156430263937 0.0006801564359802754 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 93631 11147 RTDYGQVFTY True H1975_Epitope_Rep2 1248.5775017848798 1248.57640993586 47.914 2 0.18391010077869735 0.0006801564359802754 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 140819 8740 YYSPTKNEI True PC9_epitope_Rep4 1113.53423999057 1113.5331499358601 41.123 2 0.18390732542888552 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 105159 7524 STMGYMMAK True NCI_RA007_Epitope_Rep4 1018.4285953471799 1018.42748993586 35.586 2 0.18390562193501422 0.0006801564359802754 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 104615 7575 SSVENIQRV True PC9_epitope_Rep3 1030.5407223533398 1030.5396299358601 34.137 2 0.18390435369963393 0.0006801564359802754 0.9438714419765777 ['ENSG00000173801|ENST00000393931|JUP'] 110977 8730 TLDDESLKY True H1975_Epitope_Rep2 1082.5131701928199 1082.51257496793 38.541 1 0.18389026070658349 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 43302 11650 IHEPEPHIL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 49.69 2 0.18388979601237276 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 88141 21205 QWPPDPPLHF True PC9_epitope_Rep5 1232.59784330664 1232.59674993586 86.612 2 0.1838667735208749 0.0006801564359802754 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 41214 7410 IADMGHLKY True H1975_Epitope_Rep2 1046.52190148506 1046.5208099358601 33.445 2 0.18385539424441305 0.0006801564359802754 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA'] 131827 19943 VYAPPVGGFSF True PC9_epitope_Rep6 1139.56514619603 1139.56404993586 89.371 2 0.18385407337877166 0.0006801564359802754 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 86729 8806 QRLAEPSQL True PC9_epitope_Rep2 1040.56145779792 1040.56036993586 39.226 2 0.1838539511290732 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 29248 19027 FVDEYDPTI True PC9_epitope_Rep4 1097.49170647225 1097.4906099358602 81.277 2 0.18384715839465643 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 104321 11094 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45284993586 47.707 2 0.18384203775055843 0.0006801564359802754 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 48698 7250 KEMENFEAP True NCI_RA007_Epitope_Rep3 1093.4750108622898 1093.47390993586 35.627 2 0.18384194147667926 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 44538 13583 IPAPPLSKV True PC9_epitope_Rep3 920.56950330048 920.56840993586 57.303 2 0.18383911724894433 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF'] 5905 18647 APHEILIQI True PC9_epitope_Rep2 1032.59678067748 1032.59568993586 77.091 2 0.1838369252930968 0.0006801564359802754 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 1407 9888 AEEFVIVKA True H1975_Epitope_Rep1 1004.5542471591598 1004.55314993586 42.967 2 0.18382409264730504 0.0006801564359802754 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.L636V|1|0.18|ENSG00000196455|chr3:130723489-130723489|G/C|missense_variant'] 132137 7012 VYISEHEHF True NCI_RA007_Epitope_Rep5 1159.5298233164701 1159.5281849037901 33.652 3 0.1838222723224552 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 24408 22466 FAFQAEIAQL True PC9_epitope_Rep5 1136.5866099165999 1136.58550993586 91.418 2 0.1838210305836309 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 1052 11900 AEAIPEPVV True H1975_Epitope_Rep2 923.49639792987 923.4958449679301 50.853 1 0.18381498207615005 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000043143|Q9NQC1-2|JADE2', 'nc|ENSG00000043143|Q9NQC1|JADE2', 'ENSG00000043143|ENST00000681547|JADE2', 'nc|ENSG00000043143|Q9NQC1-3|JADE2'] 6921 19763 AQLELISRL True PC9_epitope_Rep1 1041.61824439805 1041.6171499358602 80.844 2 0.18381310070953275 0.0006801564359802754 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 23716 19175 EYIKFLRSI True PC9_epitope_Rep5 1167.6651945904698 1167.66355490379 78.794 3 0.18380984872753872 0.0006801564359802754 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 23650 19861 EYGKFFVTL True PC9_epitope_Rep4 1102.5698972233 1102.5688099358601 84.525 2 0.18380140971736722 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 36642 20243 GVLPNIQAV True PC9_epitope_Rep2 909.5283667644899 909.52726993586 83.285 2 0.1837925186614056 0.0006801564359802754 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 35738 6613 GTTAVFINK True NCI_RA007_Epitope_Rep4 949.5232813840499 949.52218993586 32.065 2 0.18379023968711486 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 113725 9133 TRDEVDATL True PC9_epitope_Rep3 1018.4931034545799 1018.49200993586 40.068 2 0.18378859262324598 0.0006801564359802754 0.9438714419765777 ['ENST00000521795.1_1_8:120865268-120868035:-|nuORF', 'ENSG00000136982|ENST00000313655|DSCC1'] 120433 15413 VFTPVVQRI True PC9_epitope_Rep2 1057.6284151589298 1057.62730993586 64.566 2 0.18378662429004433 0.0006801564359802754 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 135037 12460 YAIGNAPEL True H1975_Epitope_Rep2 946.4759968384599 946.47488993586 53.017 2 0.1837855802675215 0.0006801564359802754 0.9438714419765777 ['BAP1|p.V386Efs*45|1|0.21|ENSG00000163930|chr3:52404546-52404547|-/CT|frameshift_variant', 'ENSG00000163930|ENST00000460680|BAP1'] 9769 16032 AYLEAIHNF True PC9_epitope_Rep6 1076.52909504048 1076.5279899358602 73.991 2 0.18377958370663597 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 31828 4929 GENPIYKSA True NCI_RA007_Epitope_Rep5 977.4818104948899 977.48070993586 25.661 2 0.18376070401785807 0.0006801564359802754 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1'] 40054 11536 HQYDGLVEL True NCI_RA007_Epitope_Rep4 1072.5189242795998 1072.5178299358602 51.321 2 0.18375259331389762 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 21336 16120 ERLGQFM[Oxidation]TL True PC9_epitope_Rep5 1109.55393026977 1109.55282993586 66.996 2 0.18375160509523766 0.0006801564359802754 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 47381 18577 IYIDRGVVF True PC9_epitope_Rep4 1080.59678067748 1080.59568993586 79.533 2 0.1837410228448238 0.0006801564359802754 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11', 'nc|ENSG00000100109|Q9UBB9-2|TFIP11'] 84840 14548 QHNDLEFKL True PC9_epitope_Rep1 1142.57202248162 1142.57038490379 60.784 3 0.18372748560794847 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 2534 4465 AEQVQPPRSP True H1975_Epitope_Rep3 1107.5672714543498 1107.5661699358602 22.294 2 0.18371757175474426 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5', 'ENST00000454841.5_1_2:113343759-113346463:+|nuORF', 'ENSG00000125611|ENST00000324913|CHCHD5'] 58000 6271 LEQYPTRPHIA True H1975_Epitope_Rep1 1323.69353459663 1323.69187490379 29.189 3 0.18371480768360524 0.0006801564359802754 0.9438714419765777 ['ENSG00000138382|ENST00000260953|METTL5', 'ENST00000471560.1_1_2:170680960-170681107:-|nuORF'] 105755 19062 SVIDHIHLI True PC9_epitope_Rep5 1045.59202965021 1045.59092993586 78.351 2 0.1837136527883478 0.0006801564359802754 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 103943 17137 SRPPLLGF True PC9_epitope_Rep4 885.50723739709 885.50614993586 73.923 2 0.18371282842707676 0.0006801564359802754 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 11685 14564 DHDSSEYLL True PC9_epitope_Rep4 1077.46146897313 1077.4603699358602 63.937 2 0.1837110289944491 0.0006801564359802754 0.9438714419765777 ['ENSG00000075461|ENST00000262138|CACNG4'] 105005 3458 STIGPEGVHQK True NCI_RA007_Epitope_Rep2 1151.5934862021898 1151.5918349037902 18.107 3 0.18370928196169856 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 21034 12282 ERDAYVQAL True PC9_epitope_Rep3 1063.52982331647 1063.5287299358602 52.27 2 0.183697571274771 0.0006801564359802754 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 8066 8874 ATEDPWKTNY True H1975_Epitope_Rep3 1223.54586730343 1223.5447699358601 39.136 2 0.18369467749694907 0.0006801564359802754 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 26156 17169 FHNELLTQL True PC9_epitope_Rep6 1113.5818588893299 1113.5807699358602 78.626 2 0.18369413884117458 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 60502 8564 LINNLGTIAK True H1975_Epitope_Rep1 1055.63389446219 1055.63278993586 37.867 2 0.1836929710934358 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 7195 16952 ARDETEFYL True PC9_epitope_Rep5 1142.5244035828598 1142.5233099358602 70.224 2 0.1836886499437548 0.0006801564359802754 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 136465 6589 YHGNTNPEL True PC9_epitope_Rep3 1043.46722305991 1043.4661299358602 30.37 2 0.18368569211338004 0.0006801564359802754 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 17614 6651 EHNDLQYAA True PC9_epitope_Rep2 1059.46213767947 1059.46104993586 30.99 2 0.18368522309060045 0.0006801564359802754 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 67480 6881 LTEIIASR True H1975_Epitope_Rep3 901.5232813840499 901.52218993586 31.426 2 0.18367897585667872 0.0006801564359802754 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 87834 16067 QVISELDKL True PC9_epitope_Rep4 1043.58627556343 1043.5851699358602 69.735 2 0.183675711528896 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5'] 27708 8422 FQDNHGVTV True PC9_epitope_Rep5 1015.4723084403499 1015.47120993586 37.336 2 0.1836658375050278 0.0006801564359802754 0.9438714419765777 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2'] 104806 5938 STDSETLRY True H1975_Epitope_Rep2 1070.48801807414 1070.4869299358602 27.823 2 0.18365320221345224 0.0006801564359802754 0.9438714419765777 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 11926 16807 DHSIIETL True PC9_epitope_Rep2 926.47091145802 926.46980993586 69.895 2 0.18364047873783707 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 28090 21600 FRDYFPIQL True PC9_epitope_Rep5 1197.6182443980497 1197.6171499358602 88.124 2 0.18363955478996913 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2'] 64523 12631 LRDAVPATL True PC9_epitope_Rep5 954.5498304850599 954.54872993586 53.588 2 0.1836386322462977 0.0006801564359802754 0.9438714419765777 ['ENSG00000172922|ENST00000308418|RNASEH2C', 'ENST00000528220.1_1_11:65487749-65488268:-|nuORF'] 11604 18920 DHAEFSYVL True PC9_epitope_Rep4 1079.49237517859 1079.4912699358601 80.862 2 0.1836324858747572 0.0006801564359802754 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 70414 16810 LYQKDFLRI True PC9_epitope_Rep5 1194.6760936273397 1194.6744449037901 69.667 3 0.18362005307924256 0.0006801564359802754 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6', 'nc|ENSG00000139926|Q96NE9-3|FRMD6'] 38564 18335 HHFEWIQKL True PC9_epitope_Rep5 1236.64037682496 1236.63874490379 75.54 3 0.18360491960267164 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 84939 19776 QHVQEWWEL True PC9_epitope_Rep4 1253.5829215184897 1253.58182993586 84.194 2 0.1835944826525459 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion'] 70915 18924 [Acetylation]-M[Oxidation]ELITILEK True H1975_Epitope_Rep3 1146.62061316356 1146.6195099358602 79.36 2 0.18358976731102297 0.0006801564359802754 0.9438714419765777 ['ENSG00000108424|ENST00000290158|KPNB1'] 102913 17432 SQIHDIVLV True PC9_epitope_Rep1 1022.5760452328999 1022.57494993586 71.85 2 0.18358656865648004 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 70996 15073 MEQPLDLTHIV True H1975_Epitope_Rep1 1294.65912323386 1294.6580299358602 63.229 2 0.1835620027762206 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 63275 20865 LPAQPLPLSV True PC9_epitope_Rep2 1033.6171817688898 1033.6160899358601 85.703 2 0.18355734531397044 0.0006801564359802754 0.9438714419765777 ['ENSG00000074181|ENST00000263388|NOTCH3'] 115070 13384 TTSHLMGMFY True H1975_Epitope_Rep2 1186.51510185246 1186.51400993586 56.616 2 0.18355619243903204 0.0006801564359802754 0.9438714419765777 ['ENSG00000168496|ENST00000305885|FEN1'] 40730 12102 HTVEDLVKV True PC9_epitope_Rep2 1038.5709598524597 1038.5698699358602 51.86 2 0.18354852146638623 0.0006801564359802754 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 88933 6266 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 29.111 2 0.18353969191149797 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 107453 18796 SYVRSLPFF True PC9_epitope_Rep6 1114.5811306133398 1114.58002993586 84.939 2 0.1835352392727367 0.0006801564359802754 0.9438714419765777 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 87656 6084 QVASTLKQV True PC9_epitope_Rep2 972.5603951687598 972.55928993586 28.794 2 0.18353428079782116 0.0006801564359802754 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 132870 9035 VYTSGVYHI True NCI_RA007_Epitope_Rep4 1037.51819600361 1037.5170899358602 41.586 2 0.1835326263176829 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 97737 8425 SHGDVIRPL True PC9_epitope_Rep5 992.5403284305199 992.53922993586 37.347 2 0.18351901016645017 0.0006801564359802754 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 113768 7723 TRDPQFQKL True PC9_epitope_Rep5 1131.6036569630699 1131.60254993586 34.648 2 0.18351605783976535 0.0006801564359802754 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 109677 8607 THEEAVTAL True PC9_epitope_Rep1 969.4767251144499 969.47562993586 37.943 2 0.18350382599714524 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 132446 10433 VYNSEYYHF True NCI_RA007_Epitope_Rep3 1220.5138388991602 1220.51274993586 48.104 2 0.18349397873804377 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 112663 4494 TPFQGQGHGA True PC9_epitope_Rep3 998.4569927293797 998.45588993586 22.38 2 0.18348122148576101 0.0006801564359802754 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 37593 9952 GYSFTTTAER True PC9_epitope_Rep1 1131.51965255559 1131.5185499358602 43.142 2 0.18347585851473908 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 89444 12640 REQDIYLPIA True H1975_Epitope_Rep2 1216.6451874218799 1216.6440899358602 53.719 2 0.18347078987457743 0.0006801564359802754 0.9438714419765777 ['ENSG00000120837|ENST00000240055|NFYB'] 104453 5139 SSLNLRET True NCI_RA007_Epitope_Rep3 918.47705946762 918.47596993586 27.208 2 0.1834697012506744 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'VIM|p.D429Y|1|0.25|ENSG00000026025|chr10:17236305-17236305|G/T|missense_variant'] 24733 11648 FAYDGKDYL True NCI_RA007_Epitope_Rep5 1090.4971262058598 1090.4960299358602 51.457 2 0.18346740087650612 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 45028 14068 IQLVEEELDR True PC9_epitope_Rep6 1242.6455813446998 1242.64448993586 65.984 2 0.18346224886234289 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 52593 17016 KPYNVYITV True PC9_epitope_Rep3 1095.59644632431 1095.5953499358602 70.608 2 0.18346041439186828 0.0006801564359802754 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 31903 12708 GEQLTLPPPP True H1975_Epitope_Rep3 1047.5600608155898 1047.5589699358602 54.092 2 0.18345923408006576 0.0006801564359802754 0.9438714419765777 ['ENSG00000196313|ENST00000434423|POM121', 'nc|ENSG00000205578|A6NF01|POM121B', 'nc|ENSG00000196313|Q96HA1-2|POM121', 'ENSG00000272391|ENST00000615331|POM121C', 'nc|ENSG00000196313|Q96HA1-3|POM121', 'nc|ENSG00000272391|A8CG34|POM121C'] 85652 14515 QLQGYLRSV True PC9_epitope_Rep5 1062.5821932425 1062.58108993586 60.831 2 0.18345394110305904 0.0006801564359802754 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000431036.1_1_22:45298215-45298323:+|nuORF'] 3908 13831 AHDDSVMYL True PC9_epitope_Rep4 1049.44879611445 1049.4476899358601 61.099 2 0.1834505798264017 0.0006801564359802754 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 47681 20448 IYPSPTGVLI True PC9_epitope_Rep4 1058.60119735158 1058.60010993586 86.798 2 0.183449949607268 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 111183 21933 TLFEDSFQQI True PC9_epitope_Rep5 1226.58191845898 1226.58082993586 89.406 2 0.183448389253674 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'WWP1|p.K872Vfs*4|1|0.15|ENSG00000123124|chr8:86461789-86461790|AA/-|frameshift_variant', 'ENSG00000123124|ENST00000517970|WWP1', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'ITCH-NCOA6|2|fusion', 'nc|ENSG00000289720|Q96J02-3|ITCH'] 76546 12853 NTDPSIVMTY True H1975_Epitope_Rep2 1139.51687567427 1139.5157699358601 54.549 2 0.18344281436388968 0.0006801564359802754 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 114062 8032 TRNPVSEEL True PC9_epitope_Rep6 1043.52473793603 1043.52364993586 40.378 2 0.18344229310528667 0.0006801564359802754 0.9438714419765777 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.C424Afs*36|1|0.25|ENSG00000168411|chr16:74636502-74636502|A/-|frameshift_variant'] 105163 3359 STMPHTSGMNR True NCI_RA007_Epitope_Rep4 1217.52812614765 1217.5264649037902 18.733 3 0.1834416728687132 0.0006801564359802754 0.9438714419765777 ['ENSG00000150907|ENST00000379561|FOXO1'] 103629 19036 SRDLFTYTV True PC9_epitope_Rep1 1100.55022440788 1100.54912993586 78.013 2 0.18343752585558543 0.0006801564359802754 0.9438714419765777 ['ENSG00000121281|ENST00000673801|ADCY7'] 27649 6434 FQDDDQTRV True PC9_epitope_Rep5 1122.4941660837399 1122.4930699358601 29.723 2 0.18343460610007267 0.0006801564359802754 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 86842 14928 QRQDIAFAY True PC9_epitope_Rep3 1110.5458077337798 1110.54470993586 62.555 2 0.18343349420394486 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 83716 5484 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.4648849679301 26.147 1 0.18343078314960676 0.0006801564359802754 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 137472 22006 YLPELLQTV True PC9_epitope_Rep2 1074.5961119711399 1074.5950099358602 90.119 2 0.18342056998970802 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 23388 4328 EVVEEAENGR True NCI_RA007_Epitope_Rep2 1130.5203808315798 1130.51987496793 21.472 1 0.18341657472895423 0.0006801564359802754 0.9438714419765777 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 140487 21332 YYIFIPSKF True PC9_epitope_Rep1 1176.6219327961599 1176.62137496793 86.884 1 0.18340908385794544 0.0006801564359802754 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 96626 5368 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 25.688 2 0.1834054310930982 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 17457 19277 EHGNFLITV True PC9_epitope_Rep1 1028.52909504048 1028.5279899358602 78.951 2 0.18340318389631896 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 20074 11117 ENFVAFVDK True H1975_Epitope_Rep1 1067.5287606873098 1067.52766993586 47.726 2 0.18340046872814703 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 84591 8792 QHDPETSVL True PC9_epitope_Rep5 1024.48253877088 1024.4814499358602 38.761 2 0.18339134227545154 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 40105 8148 HRDGALTQL True PC9_epitope_Rep5 1009.53049202281 1009.52938993586 36.28 2 0.18338948646887485 0.0006801564359802754 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 103320 14758 SQVDRLVAL True PC9_epitope_Rep4 999.5712942056298 999.57018993586 64.699 2 0.1833809416958054 0.0006801564359802754 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 106684 10426 SYANVQDGF True NCI_RA007_Epitope_Rep4 999.4297749220299 999.42927496793 46.956 1 0.18337539733202085 0.0006801564359802754 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 9686 10623 AYHELAQVY True PC9_epitope_Rep6 1092.5240096600398 1092.52290993586 51.679 2 0.18337088987157457 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENSG00000141030|ENST00000268717|COPS3'] 47718 18563 IYQDVTLKW True PC9_epitope_Rep4 1164.6179100448799 1164.6168099358601 79.48 2 0.1833658457813237 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'BBS9|p.V734*|1|0.27|ENSG00000122507|chr7:33505546-33505546|G/-|frameshift_variant', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9', 'nc|ENSG00000122507|Q3SYG4-5|BBS9'] 136339 13246 YHAQMPDSL True PC9_epitope_Rep3 1060.46478053176 1060.4636899358602 55.984 2 0.18334845654525428 0.0006801564359802754 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 17402 7033 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.5352099358602 31.859 2 0.18334526878010643 0.0006801564359802754 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 96640 11863 SENFEELLK True H1975_Epitope_Rep1 1107.54480467427 1107.54370993586 50.63 2 0.18334387589039589 0.0006801564359802754 0.9438714419765777 ['CRABP2|p.R12Q|1|0.27|ENSG00000143320|chr1:156705412-156705412|C/T|missense_variant', 'ENSG00000143320|ENST00000368222|CRABP2'] 65319 14942 LSELEAALQR True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 62.735 2 0.18333986590859683 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 37876 8067 HEAESVLAV True H1975_Epitope_Rep2 953.4818104948898 953.48070993586 35.977 2 0.18333871358399303 0.0006801564359802754 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 103533 16904 SRDDNMFQI True PC9_epitope_Rep2 1124.49205790876 1124.4909699358602 70.265 2 0.18333733271412428 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 92182 4367 RQFSGARNQL True NCI_RA007_Epitope_Rep4 1175.6159529822698 1175.61430490379 23.147 3 0.18333537298318178 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3'] 98285 5547 SIFKQPVTK True NCI_RA007_Epitope_Rep4 1046.61243074162 1046.61132993586 27.934 2 0.1833337974812508 0.0006801564359802754 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 11826 18442 DHMRFISEL True PC9_epitope_Rep1 1146.54917886206 1146.54754490379 75.728 3 0.18331820775605576 0.0006801564359802754 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 140321 11373 YYEEQHPEL True PC9_epitope_Rep1 1206.5193182024198 1206.51822993586 48.627 2 0.1833153540077066 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 53304 7736 KTLTGKTITL True PC9_epitope_Rep4 1074.6648602373 1074.66376993586 37.147 2 0.18331086430895865 0.0006801564359802754 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 94497 9646 RYIANTVEL True NCI_RA007_Epitope_Rep4 1077.58185888933 1077.5807699358602 43.955 2 0.18330877087913805 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 93898 22369 RVIDYILDL True PC9_epitope_Rep5 1118.63356010902 1118.6324699358602 91.054 2 0.18330803337425397 0.0006801564359802754 0.9438714419765777 ['ID3|p.Q71K|1|0.16|ENSG00000117318|chr1:23559216-23559216|G/T|missense_variant', 'ENSG00000117318|ENST00000374561|ID3'] 105529 11306 SVDPHGFISY True H1975_Epitope_Rep2 1120.5189242796 1120.5178299358602 48.535 2 0.18329017145756393 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 86697 14744 QRIDEFESM True PC9_epitope_Rep5 1153.5073736197298 1153.50626993586 61.712 2 0.18328858476339968 0.0006801564359802754 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 94646 22241 RYLDLFTSF True PC9_epitope_Rep5 1160.5866099165999 1160.58550993586 90.557 2 0.18328765910734618 0.0006801564359802754 0.9438714419765777 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 115143 5436 TVADKIHSV True PC9_epitope_Rep2 968.52909504048 968.52798993586 26.301 2 0.18327883883696822 0.0006801564359802754 0.9438714419765777 ['ENSG00000276023|ENST00000617516|DUSP14'] 83012 22588 PYISNIYLI True PC9_epitope_Rep3 1094.60119735158 1094.60010993586 92.155 2 0.18327547386667442 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 124343 19771 VLDSEGYLLFY True H1975_Epitope_Rep1 1317.6492697428098 1317.64816993586 82.282 2 0.18327011236576493 0.0006801564359802754 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 104369 19092 SSFPRFYFV True PC9_epitope_Rep6 1148.5654805492 1148.5643899358602 86.084 2 0.183267820729064 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 1901 7836 AEILNGKEISA True H1975_Epitope_Rep1 1143.61355294043 1143.61244993586 35.091 2 0.18326489792681386 0.0006801564359802754 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 6604 18954 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 78.13 2 0.1832548494134158 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 133560 12363 WHSDDEPSL True PC9_epitope_Rep5 1084.44615326216 1084.4450499358602 52.55 2 0.18324966610217366 0.0006801564359802754 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 40649 20411 HTIGFGIYEV True PC9_epitope_Rep5 1134.57095985246 1134.5698699358602 83.549 2 0.18324821916820885 0.0006801564359802754 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000480581.1_1_1:223939741-223945196:+|nuORF'] 93641 7249 RTEPFQDGY True H1975_Epitope_Rep2 1111.4934378077498 1111.4923499358601 32.817 2 0.18324591964933462 0.0006801564359802754 0.9438714419765777 ['ENSG00000164543|ENST00000319357|STK17A'] 8140 6095 ATFDAISK True NCI_RA007_Epitope_Rep5 851.43888305375 851.43778993586 30.126 2 0.1832348175694888 0.0006801564359802754 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF', 'ENST00000475555.1_1_4:144270430-144270667:-|nuORF', 'ENST00000488906.1_1_17:45236559-45237015:-|nuORF'] 73476 10753 NEVTDYAIA True H1975_Epitope_Rep1 994.46074069714 994.4596499358599 46.323 2 0.18323199216151573 0.0006801564359802754 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 76566 6419 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 29.611 2 0.18323152490809994 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 21578 4862 ERSGVNSEL True PC9_epitope_Rep2 989.47778774361 989.47668993586 24.07 2 0.1832300351321986 0.0006801564359802754 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 87463 11684 QTETGTPYM[Oxidation]LY True H1975_Epitope_Rep1 1318.5751192068199 1318.5740299358602 49.932 2 0.18322982205500626 0.0006801564359802754 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 28156 15168 FRLKYENEL True PC9_epitope_Rep5 1210.6346227381798 1210.63297490379 63.351 3 0.18322553545416426 0.0006801564359802754 0.9438714419765777 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant', 'nc|ENSG00000171401|P13646-2|KRT13', 'ENSG00000167916|ENST00000264651|KRT24', 'CON__Q2M2I5', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000186393|ENST00000335552|KRT26', 'CON__Q7Z3Y9'] 119079 6094 VEHNYYVSA True H1975_Epitope_Rep3 1080.48762415132 1080.48652993586 28.453 2 0.1832241509910638 0.0006801564359802754 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2'] 88467 22194 QYVYWLHML True PC9_epitope_Rep1 1251.61105084263 1251.6099499358602 90.189 2 0.18322329971621026 0.0006801564359802754 0.9438714419765777 ['ENSG00000135926|ENST00000258412|TMBIM1'] 53372 6702 KTYGEIFEK True NCI_RA007_Epitope_Rep4 1113.57062549929 1113.5695299358601 32.402 2 0.1832150944929385 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 74407 6342 NIVEAAAVR True NCI_RA007_Epitope_Rep5 941.5294293936498 941.52832993586 31.069 2 0.18321499661121915 0.0006801564359802754 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'RPS26|p.I41M|1|0.12|ENSG00000197728|chr12:56042544-56042544|T/G|missense_variant', 'ENST00000475510.1_1_3:124452395-124452491:-|nuORF', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 74400 20802 NIVDKFVIV True PC9_epitope_Rep1 1045.61718176889 1045.6160899358601 84.841 2 0.18321490188115439 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 23884 6389 EYMKHTRLF True NCI_RA007_Epitope_Rep5 1223.6121134717898 1223.61046490379 31.247 3 0.1832141971321354 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 134922 7856 YADYSGQQSTY True H1975_Epitope_Rep3 1281.51496109797 1281.5138699358602 35.194 2 0.18321207484863655 0.0006801564359802754 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL'] 114011 20864 TRLSNIFVI True PC9_epitope_Rep5 1061.62332977849 1061.62222993586 85.305 2 0.1832099359903661 0.0006801564359802754 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF'] 55972 15194 LDIDSPPITAR True PC9_epitope_Rep1 1196.6401020414398 1196.63900993586 63.265 2 0.18320315489795144 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 61956 23655 LLLPDYYLVTV True PC9_epitope_Rep3 1307.73769082439 1307.7365899358601 96.275 2 0.1832005079091527 0.0006801564359802754 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 33536 19474 GLIEILKKV True PC9_epitope_Rep2 1011.6692173417499 1011.66812993586 80.286 2 0.18319992048055928 0.0006801564359802754 0.9438714419765777 ['ENSG00000105185|ENST00000590247|PDCD5'] 17269 21877 EHDAFIFAL True PC9_epitope_Rep1 1061.51819600361 1061.5170899358602 88.962 2 0.18319636485983942 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 82177 13899 PTEISQSLLY True H1975_Epitope_Rep2 1149.59175486669 1149.59064993586 58.608 2 0.1831961583157632 0.0006801564359802754 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 110193 16073 TIDQLYLEY True H1975_Epitope_Rep2 1156.5652057656798 1156.5641099358602 67.029 2 0.1831911236690939 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 39926 11471 HQLSQLQAL True PC9_epitope_Rep6 1036.5665431783598 1036.5654499358602 55.191 2 0.18319008425178127 0.0006801564359802754 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 14304 12234 DTDDVTYQVY True H1975_Epitope_Rep2 1217.5088130883703 1217.50770993586 52.14 2 0.1831803342708011 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198363|Q12797-10|ASPH', 'ENSG00000198363|ENST00000379454|ASPH', 'ENST00000523897.5_1_8:62496079-62555960:-|nuORF', 'nc|ENSG00000198363|Q12797-9|ASPH', 'nc|ENSG00000198363|Q12797-6|ASPH', 'nc|ENSG00000198363|Q12797-11|ASPH', 'nc|ENSG00000198363|Q12797-5|ASPH', 'nc|ENSG00000198363|Q12797-8|ASPH', 'nc|ENSG00000198363|Q12797-2|ASPH'] 107399 13783 SYTHIQYLF True NCI_RA007_Epitope_Rep5 1170.5709598524602 1170.5698699358602 59.693 2 0.18317519408942168 0.0006801564359802754 0.9438714419765777 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 53862 18974 KYGVTFYNF True PC9_epitope_Rep4 1137.54949613189 1137.54838993586 81.073 2 0.1831654662794746 0.0006801564359802754 0.9438714419765777 ['ENST00000510737.1_1_4:120160395-120160458:+|nuORF'] 8640 3943 AVAPPTPASK True NCI_RA007_Epitope_Rep4 937.5232813840499 937.52218993586 21.404 2 0.18316271326845282 0.0006801564359802754 0.9438714419765777 ['ENSG00000173894|ENST00000310942|CBX2'] 127243 21632 VQIPFFAKL True PC9_epitope_Rep3 1061.62735252977 1061.6262499358602 88.506 2 0.18315963657005901 0.0006801564359802754 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD'] 113906 15096 TRIGLETSL True PC9_epitope_Rep1 988.55530978832 988.55420993586 62.886 2 0.18315880815286847 0.0006801564359802754 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 38251 14253 HEYPWILSA True NCI_RA007_Epitope_Rep5 1114.54474510462 1114.54364993586 61.517 2 0.18315440857094453 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 62216 18186 LLPSRQFGF True PC9_epitope_Rep2 1063.5814649665099 1063.58036993586 75.26 2 0.18315038644611253 0.0006801564359802754 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 32101 10814 GEYGKFFVT True NCI_RA007_Epitope_Rep3 1046.50729696674 1046.5061899358602 49.584 2 0.1831475297248725 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 86579 10702 QRDEKVLEL True PC9_epitope_Rep3 1128.6138872935999 1128.61225490379 46.117 3 0.18314751231415832 0.0006801564359802754 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 11894 5542 DHQQNSPTL True PC9_epitope_Rep3 1038.47303671634 1038.47192993586 26.397 2 0.18314701807407777 0.0006801564359802754 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1'] 7109 4938 AQYEDIAQK True NCI_RA007_Epitope_Rep5 1064.5138388991597 1064.51274993586 25.694 2 0.18313710772001407 0.0006801564359802754 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 74082 11324 NHVASDISL True PC9_epitope_Rep1 954.47705946762 954.47596993586 48.436 2 0.18312086607052644 0.0006801564359802754 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 29601 22151 FVLDKVPFL True PC9_epitope_Rep1 1076.6270181766 1076.62592993586 90.019 2 0.1831183205192312 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 102921 15806 SQIHDIVLV True PC9_epitope_Rep4 1022.5760452328999 1022.57494993586 68.721 2 0.18311724486956424 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 14856 9192 DYFEQYGK True NCI_RA007_Epitope_Rep2 1048.4501760134401 1048.44906993586 40.362 2 0.1831028753666303 0.0006801564359802754 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 21024 11300 ERATNIEVL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 51.242 2 0.1830995084774431 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 32785 10157 GIDSSSPEV True PC9_epitope_Rep1 889.4028914678499 889.40234496793 43.945 1 0.1830991588650846 0.0006801564359802754 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 34815 7925 GQVALRTSL True NCI_RA007_Epitope_Rep5 943.54507945779 943.5439899358599 37.175 2 0.18309257736471216 0.0006801564359802754 0.9438714419765777 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 105870 15010 SVKNGFLTI True PC9_epitope_Rep6 977.55458151233 977.55348993586 69.763 2 0.1830897833866981 0.0006801564359802754 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 56848 10644 LEDFRVDPP True H1975_Epitope_Rep2 1086.53457434374 1086.53346993586 45.966 2 0.18308974383761528 0.0006801564359802754 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129121771-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-8|LARP1B', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B'] 53212 10824 KTDHFIFTY True H1975_Epitope_Rep2 1170.57095985246 1170.5698699358602 46.663 2 0.18308493520031852 0.0006801564359802754 0.9438714419765777 ['ENSG00000116212|ENST00000371370|LRRC42'] 114173 8496 TRSTFSTNY True PC9_epitope_Rep5 1075.49343780775 1075.4923499358601 37.622 2 0.1830832515136829 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 117177 21032 TYTDRVFFL True PC9_epitope_Rep3 1160.5866099165999 1160.58550993586 86.178 2 0.1830814209856288 0.0006801564359802754 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 81754 14360 PSDLTVGQFY True H1975_Epitope_Rep2 1125.5342399905699 1125.5331499358601 60.386 2 0.18307857437476424 0.0006801564359802754 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 134918 9569 YADVGGKQF True PC9_epitope_Rep5 983.47124581119 983.47014993586 41.768 2 0.18307232391507436 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 98532 14182 SILPAIFQK True NCI_RA007_Epitope_Rep1 1015.6066170851899 1015.60552993586 59.199 2 0.1830689977921168 0.0006801564359802754 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 119398 8437 VENYLIQM[Oxidation]AR True H1975_Epitope_Rep1 1251.62815783919 1251.6270699358602 37.379 2 0.1830661255362968 0.0006801564359802754 0.9438714419765777 ['ENSG00000105185|ENST00000590247|PDCD5', 'nc|ENSG00000105185|O14737-2|PDCD5'] 38371 18550 HGFAGYFETV True PC9_epitope_Rep4 1126.5083595959 1126.5072699358602 79.427 2 0.18305997312411806 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5', 'ENST00000557758.1_1_14:23391634-23392032:-|nuORF'] 65356 12437 LSEPEEAAALY True H1975_Epitope_Rep1 1191.5659340416698 1191.5648299358602 52.875 2 0.18305784222151106 0.0006801564359802754 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant'] 54409 7676 KYSLIKGNF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 37.312 2 0.1830574725110838 0.0006801564359802754 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 411 12626 AALNGLYRV True PC9_epitope_Rep6 975.55016483823 975.54906993586 60.028 2 0.1830523856717157 0.0006801564359802754 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 89198 11643 REIFFPETA True H1975_Epitope_Rep2 1108.5553097883198 1108.5542099358602 49.854 2 0.18305146537241881 0.0006801564359802754 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 28057 21828 FRDFIPVVL True PC9_epitope_Rep5 1104.6331661861998 1104.63206993586 88.993 2 0.18305068189731835 0.0006801564359802754 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 102516 12375 SQADAFFKA True PC9_epitope_Rep4 983.47124581119 983.47014993586 55.407 2 0.1830487584490336 0.0006801564359802754 0.9438714419765777 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L'] 91575 6759 RPAPPPPTV True PC9_epitope_Rep5 930.5287011176599 930.52760993586 30.969 2 0.18304841206873548 0.0006801564359802754 0.9438714419765777 ['ENST00000464824.2_1_1:155034702-155034975:+|nuORF', 'nc|ENSG00000143537|Q13444-11|ADAM15', 'nc|ENSG00000143537|Q13444-2|ADAM15', 'nc|ENSG00000143537|Q13444-12|ADAM15', 'nc|ENSG00000143537|Q13444-5|ADAM15', 'nc|ENSG00000143537|Q13444-4|ADAM15', 'ENST00000527418.5_1_1:155025082-155034975:+|nuORF', 'nc|ENSG00000143537|Q13444-3|ADAM15', 'ENSG00000143537|ENST00000356955|ADAM15'] 126773 6669 VPSLQGEKA True PC9_epitope_Rep5 927.5025459394699 927.50144993586 30.625 2 0.18303863258103056 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 139678 20212 YTTDFIYQL True PC9_epitope_Rep6 1162.55464108198 1162.55354993586 90.421 2 0.18303838791417978 0.0006801564359802754 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 53776 20072 KYFEVPSVL True PC9_epitope_Rep2 1080.5855472874398 1080.5844499358602 82.612 2 0.18303074404966055 0.0006801564359802754 0.9438714419765777 ['ENSG00000131966|ENST00000254286|ACTR10'] 29341 17067 FVDVLGLEEE True H1975_Epitope_Rep1 1148.5601203852398 1148.5595749679298 71.074 1 0.1830263189035624 0.0006801564359802754 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 103522 11388 SRDDNM[Oxidation]FQI True PC9_epitope_Rep4 1140.48697290876 1140.4858699358601 51.575 2 0.183026055832545 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 8529 4431 ATWATKELRK True NCI_RA007_Epitope_Rep4 1202.6771562564998 1202.67550490379 23.407 3 0.1830227959967382 0.0006801564359802754 0.9438714419765777 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1'] 139095 10162 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 44.089 2 0.18301075137441278 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 42227 3514 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep2 1056.52738116876 1056.5262899358602 18.368 2 0.1830074462227808 0.0006801564359802754 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 37516 14270 GYIESVQHI True PC9_epitope_Rep5 1044.52400966004 1044.52290993586 59.893 2 0.18300566712361527 0.0006801564359802754 0.9438714419765777 ['ENSG00000125871|ENST00000377710|MGME1'] 94082 14753 RVVDYLTKL True PC9_epitope_Rep6 1105.64954452633 1105.64844993586 68.697 2 0.1830050940787747 0.0006801564359802754 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1', 'ENST00000417846.2_1_6:116432031-116439170:+|nuORF'] 107067 21901 SYLSSILRF True PC9_epitope_Rep3 1084.59169529704 1084.5905899358602 89.547 2 0.18299009263149624 0.0006801564359802754 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 110980 8713 TLDDESLKY True H1975_Epitope_Rep3 1082.5131701928199 1082.5120699358602 38.516 2 0.18298942989324105 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 136653 5880 YIDQEELNK True NCI_RA007_Epitope_Rep5 1150.5506183307 1150.5495299358602 29.304 2 0.18298824764472352 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 31564 9907 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51676993586 43.043 2 0.1829767332581452 0.0006801564359802754 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 24117 7187 EYSKQMQRF True PC9_epitope_Rep1 1215.57064258263 1215.56899490379 32.458 3 0.1829760773671983 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 53904 18214 KYIENLDNITF True PC9_epitope_Rep6 1368.6925315371197 1368.69142993586 82.703 2 0.1829753712909416 0.0006801564359802754 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 53947 14596 KYITDWQNVF True NCI_RA007_Epitope_Rep3 1312.6451874218799 1312.6440899358602 64.755 2 0.1829743718535756 0.0006801564359802754 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 23943 12220 EYNSDLHQF True PC9_epitope_Rep1 1151.4883524273098 1151.48724993586 51.864 2 0.18297188112214655 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 54297 16232 KYPSPFFVF True NCI_RA007_Epitope_Rep3 1130.5800679841798 1130.5789699358602 71.536 2 0.18297149609979155 0.0006801564359802754 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 23635 12703 EYGFQNALIVR True H1975_Epitope_Rep1 1308.68263555976 1308.68152993586 53.919 2 0.18296245879279452 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 89620 9440 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.54912993586 41.279 2 0.1829525653069348 0.0006801564359802754 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 36405 16098 GVIDLIFEK True NCI_RA007_Epitope_Rep4 1032.58554728744 1032.5844499358602 69.816 2 0.18295020382872088 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 89461 5616 REQEITAVQA True H1975_Epitope_Rep2 1143.58840082175 1143.58730993586 26.604 2 0.18294964203461983 0.0006801564359802754 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 1461 5229 AEELGNNVKP True H1975_Epitope_Rep3 1069.54038800017 1069.53928993586 25.198 2 0.1829369848564477 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000131373|Q9UJ83-3|HACL1', 'nc|ENSG00000131373|Q9UJ83-4|HACL1', 'nc|ENSG00000131373|Q9UJ83-2|HACL1', 'ENSG00000131373|ENST00000321169|HACL1'] 88432 22462 QYSPLLAAF True PC9_epitope_Rep5 1008.5280324113198 1008.52692993586 91.403 2 0.182927891743295 0.0006801564359802754 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 40298 9743 HRQEIQVVL True PC9_epitope_Rep6 1120.63529144452 1120.6341899358601 47.899 2 0.18292375914980782 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 1353 5777 AEEEAATRIPA True H1975_Epitope_Rep2 1156.57241640444 1156.5713099358602 27.215 2 0.18291415810745973 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 109576 10236 THDDSHLVSL True PC9_epitope_Rep1 1122.5305515924601 1122.5294499358602 44.254 2 0.18290456708235805 0.0006801564359802754 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 84858 12811 QHQLIQEAL True PC9_epitope_Rep2 1078.5771078620598 1078.5760099358602 54.579 2 0.18290436145256253 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ACTN4|p.Q709H|1|0.35|ENSG00000130402|chr19:38725840-38725840|G/T|missense_variant'] 139256 8403 YTDATPLRV True H1975_Epitope_Rep2 1034.53965972418 1034.53856993586 37.275 2 0.18289643919763918 0.0006801564359802754 0.9438714419765777 ['ENSG00000185163|ENST00000397333|DDX51', 'ENST00000545991.1_1_12:132626393-132626546:-|nuORF', 'ENST00000546058.1_1_12:132626393-132626917:-|nuORF', 'ENST00000329073.8_1_12:132625785-132627411:-|nuORF'] 75423 15687 NQFPGFKEV True PC9_epitope_Rep5 1064.52909504048 1064.5279899358602 65.351 2 0.1828922786241014 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 52582 11395 KPYESYIGA True PC9_epitope_Rep3 1026.5022115862998 1026.50110993586 48.834 2 0.18289176193415282 0.0006801564359802754 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 134505 20332 WVDPNSPVL True PC9_epitope_Rep1 1025.51819600361 1025.5170899358602 83.037 2 0.18288642551864098 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 48586 5739 KEIEELQSQA True H1975_Epitope_Rep3 1173.58773211541 1173.5866299358602 27.102 2 0.18287978455462262 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 67513 16114 LTELPDWSYA True H1975_Epitope_Rep2 1193.56045473841 1193.5593499358602 67.194 2 0.18287790746357546 0.0006801564359802754 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 106025 13187 SVLNLVIVK True NCI_RA007_Epitope_Rep5 983.6379172134699 983.63682993586 57.401 2 0.18286227115244835 0.0006801564359802754 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 24182 16669 EYTPRSWNF True PC9_epitope_Rep4 1198.54072235334 1198.5396299358601 72.091 2 0.1828609071781195 0.0006801564359802754 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 40417 19475 HRYEFLETL True PC9_epitope_Rep1 1206.6033226098998 1206.6022299358601 79.727 2 0.1828590465095795 0.0006801564359802754 0.9438714419765777 ['ENSG00000163545|ENST00000367157|NUAK2'] 30135 17405 FYQPKIQQF True PC9_epitope_Rep3 1197.61824439805 1197.6171499358602 72.117 2 0.18284911378346128 0.0006801564359802754 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 110023 9952 THTTPVLL True PC9_epitope_Rep6 880.5018176634799 880.50072993586 48.81 2 0.18284653105306828 0.0006801564359802754 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 109596 13161 THDEAINVL True PC9_epitope_Rep3 1010.5032742154599 1010.50216993586 55.655 2 0.18283583406296466 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 135618 12461 YEEPLSPISA True H1975_Epitope_Rep2 1104.5339056373998 1104.53280993586 53.021 2 0.1828333148469522 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000467894.5_1_1:33790468-33797238:-|nuORF', 'nc|ENSG00000134686|Q8IXK0-2|PHC2', 'nc|ENSG00000134686|Q8IXK0-3|PHC2', 'ENST00000485928.5_1_1:33791428-33799821:-|nuORF'] 21048 7421 ERDISQDSL True PC9_epitope_Rep4 1061.4989171110099 1061.4978299358602 35.893 2 0.18283280525355497 0.0006801564359802754 0.9438714419765777 ['ENSG00000166233|ENST00000379887|ARIH1'] 74040 20766 NHSFMPIVL True PC9_epitope_Rep1 1056.54263692964 1056.5415299358601 84.704 2 0.1828292368443422 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 48452 9558 KEEEQPLWAA True H1975_Epitope_Rep2 1199.58225281215 1199.5811499358601 41.739 2 0.18281626660142872 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF'] 136628 9915 YIDEQFERY True H1975_Epitope_Rep3 1261.5615173675699 1261.5604299358602 43.17 2 0.18281571762433516 0.0006801564359802754 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 89343 8631 REMEENFAV True H1975_Epitope_Rep1 1123.49680893603 1123.49570993586 38.127 2 0.1828083726089491 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 63780 5391 LPSEELNR True H1975_Epitope_Rep3 956.4927095317599 956.49160993586 25.801 2 0.1827782584599624 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 115260 11179 TVDGVVFHY True H1975_Epitope_Rep3 1035.50254593947 1035.5014499358601 48.098 2 0.18277653238437838 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'VCAN-CNTNAP3B|1|fusion'] 21114 14662 ERDPSPWAV True PC9_epitope_Rep3 1055.50360856863 1055.5025099358602 61.532 2 0.18277291629868883 0.0006801564359802754 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 35262 10567 GSLNWVPVTK True NCI_RA007_Epitope_Rep5 1099.6025943339098 1099.6014899358602 47.281 2 0.18277166126334726 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE'] 14895 14832 DYKESFNTI True PC9_epitope_Rep2 1115.5135045459901 1115.5124099358602 62.314 2 0.18276099484199143 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 31914 12780 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.4912699358601 54.221 2 0.18275883825719041 0.0006801564359802754 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 132573 17432 VYPNSFFRY True PC9_epitope_Rep6 1191.5712942056298 1191.57018993586 79.666 2 0.18275619047690542 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 74751 15839 NLLPKLHIV True PC9_epitope_Rep6 1045.66480066765 1045.6637099358602 73.194 2 0.18275559812438932 0.0006801564359802754 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1', 'ENSG00000169504|ENST00000374379|CLIC4'] 136457 6504 YHGNTNPEL True PC9_epitope_Rep1 1043.46722305991 1043.4661299358602 29.821 2 0.1827464001365017 0.0006801564359802754 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 74833 9703 NLPLPPPPPPR True H1975_Epitope_Rep3 1193.6920780446499 1193.6909899358602 42.345 2 0.18274036219975123 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 70357 20351 LYPSIIQEF True PC9_epitope_Rep6 1108.580461907 1108.57936993586 90.98 2 0.1827369841352571 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 107180 21343 SYNPLWLRI True PC9_epitope_Rep1 1160.6342288153598 1160.63312993586 86.927 2 0.18272673004419068 0.0006801564359802754 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 68784 13067 LVDPSVYGY True H1975_Epitope_Rep2 1011.49131254943 1011.4907749679301 55.385 1 0.18271661436253295 0.0006801564359802754 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 24106 21088 EYSIVIQQL True PC9_epitope_Rep2 1091.58627556343 1091.5851699358602 86.572 2 0.18271062541199368 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000244038|P39656-2|DDOST', 'nc|ENSG00000244038|P39656-3|DDOST', 'ENSG00000244038|ENST00000602624|DDOST', 'nc|ENSG00000244038|P39656|DDOST'] 133034 16386 VYVQNVVKL True PC9_epitope_Rep5 1060.6280808057597 1060.6269899358601 68.027 2 0.18270905480050642 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 138683 14779 YRTDMIQAL True PC9_epitope_Rep6 1109.55392988933 1109.55282993586 68.808 2 0.18270649819648013 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 48549 4358 KEGKPPISV True H1975_Epitope_Rep2 953.5545815123298 953.55348993586 21.878 2 0.18269776840083482 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 92115 9037 RPYQPLPEA True PC9_epitope_Rep4 1069.55564414149 1069.5545499358602 42.333 2 0.18269472994175173 0.0006801564359802754 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 75887 10269 NRDQYSHLL True PC9_epitope_Rep1 1144.56252042708 1144.56088490379 44.385 3 0.1826824207773587 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 87769 8858 QVGPEAGMQKV True PC9_epitope_Rep5 1142.5753936099 1142.5742899358602 39.017 2 0.18266719860136546 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 8851 8917 AVFPSIVGRPR True NCI_RA007_Epitope_Rep5 1197.69822605425 1197.6965849037902 40.961 3 0.18266473985056592 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 105445 14356 SVAQDIPKL True PC9_epitope_Rep4 969.5494961318899 969.54838993586 63.128 2 0.18266268435096003 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 105848 19344 SVITQVFHV True PC9_epitope_Rep4 1028.5654805492 1028.5643899358602 82.516 2 0.18265938531378245 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 10935 3779 DAVTYTEHAK True NCI_RA007_Epitope_Rep2 1133.53530261973 1133.53366490379 19.339 3 0.18265337487989955 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 84662 5070 QHEGGVQEL True PC9_epitope_Rep4 995.46722305991 995.46612993586 26.147 2 0.1826492564705453 0.0006801564359802754 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 6584 18172 APWKPTWPA True PC9_epitope_Rep1 1052.5443511817998 1052.54324993586 74.688 2 0.18264485727651011 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150687|O95084-2|PRSS23', 'ENSG00000150687|ENST00000280258|PRSS23'] 1082 4794 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.39082993586 23.53 2 0.18264310521901364 0.0006801564359802754 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 96504 9184 SELEGTPEV True H1975_Epitope_Rep3 959.4447562798299 959.4442049679301 40.316 1 0.18264063215938323 0.0006801564359802754 0.9438714419765777 ['ENSG00000124787|ENST00000380051|RPP40', 'nc|ENSG00000124787|O75818-2|RPP40'] 96308 7924 SEETPLTAA True H1975_Epitope_Rep2 917.4341915961298 917.43308993586 35.425 2 0.18264050447464422 0.0006801564359802754 0.9438714419765777 ['ENSG00000182154|ENST00000371443|MRPL41'] 130945 9945 VVINYSIVK True NCI_RA007_Epitope_Rep5 1033.6171817688898 1033.6160899358601 44.894 2 0.18263557417145915 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 17380 17433 EHFAALQSL True PC9_epitope_Rep5 1014.51344497634 1014.51234993586 72.057 2 0.1826342666585515 0.0006801564359802754 0.9438714419765777 ['ENST00000526789.1_1_11:36300025-36310962:-|nuORF', 'ENST00000528608.5_1_11:36298627-36310962:-|nuORF', 'nc|ENSG00000110442|Q9P000-2|COMMD9', 'ENSG00000110442|ENST00000263401|COMMD9'] 117730 18905 VALDKVIEI True PC9_epitope_Rep4 998.6011973515799 998.60010993586 80.804 2 0.18263365826991493 0.0006801564359802754 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 54085 15040 KYMDINFDF True NCI_RA007_Epitope_Rep3 1191.52704643515 1191.5259499358601 66.62 2 0.18262919189538468 0.0006801564359802754 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 94638 21698 RYLDLFTNF True PC9_epitope_Rep2 1187.59750895347 1187.59640993586 88.939 2 0.18262518698660732 0.0006801564359802754 0.9438714419765777 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'KDELR3|p.F122Lfs*15|1|0.31|ENSG00000100196|chr22:38481225-38481228|TCTC/-|frameshift_variant'] 54249 21999 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 89.645 2 0.18261673822524133 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 76603 8427 NTFSVVPSPK True H1975_Epitope_Rep1 1074.5709598524597 1074.5698699358602 37.34 2 0.1826140107096147 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 41528 7714 IDAVNAETIR True NCI_RA007_Epitope_Rep1 1100.5825871653199 1100.5814899358602 33.998 2 0.18260547077116765 0.0006801564359802754 0.9438714419765777 ['ENST00000453466.1_1_7:102939135-102952715:+|nuORF', 'ENST00000444457.5_1_7:102938385-102969496:+|nuORF', 'ENSG00000105819|ENST00000249269|PMPCB'] 28519 7879 FSHAQTVVL True NCI_RA007_Epitope_Rep3 1000.5341804209199 1000.53308993586 38.109 2 0.18260163056523485 0.0006801564359802754 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 14340 4141 DTDSEEEIR True PC9_epitope_Rep4 1092.45711186868 1092.45600993586 22.255 2 0.18259156340739513 0.0006801564359802754 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 87780 2613 QVHPDTGISSK True NCI_RA007_Epitope_Rep5 1167.5884008217502 1167.58675490379 14.745 3 0.18258903719055622 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26', 'ENSG00000146047|ENST00000274764|H2BC1'] 98104 19791 SIAGIFKEV True PC9_epitope_Rep1 962.54368247546 962.54258993586 80.947 2 0.18258558008566245 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 86109 11843 QPQPQPYAV True PC9_epitope_Rep3 1026.5134449763398 1026.5123499358601 50.573 2 0.18258381600451526 0.0006801564359802754 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 9977 13542 AYSRVQYQF True PC9_epitope_Rep1 1160.5614577979202 1160.56036993586 56.945 2 0.18258103402695444 0.0006801564359802754 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 128423 11263 VSEEIEDIIK True H1975_Epitope_Rep3 1173.6128842340897 1173.61178993586 48.426 2 0.18257922923631564 0.0006801564359802754 0.9438714419765777 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-3|GGCT'] 8011 11534 ATDPVTGDLY True H1975_Epitope_Rep1 1050.48695544498 1050.4858499358602 49.349 2 0.18257039621263668 0.0006801564359802754 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 49366 20524 KIIDEDGLLNL True PC9_epitope_Rep2 1241.68671788069 1241.68562993586 84.377 2 0.18255962905901 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 77382 11175 NYLSHHLTI True PC9_epitope_Rep6 1096.5665431783602 1096.5654499358602 53.944 2 0.18255353825867865 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 124803 19142 VLLGKVYVV True PC9_epitope_Rep1 988.63210355704 988.63100993586 78.423 2 0.18254927359132336 0.0006801564359802754 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24|p.G413S|1|0.3|ENSG00000114796|chr3:183671046-183671046|G/A|missense_variant'] 42053 6676 IEEDKWRVA True H1975_Epitope_Rep2 1144.5876725457601 1144.58602490379 30.588 3 0.18254836038166755 0.0006801564359802754 0.9438714419765777 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'STARD4|p.K141Rfs*29|1|0.29|ENSG00000164211|chr5:111500082-111500082|T/-|frameshift_variant', 'ENSG00000164211|ENST00000296632|STARD4'] 23556 21642 EYAHLFEVF True PC9_epitope_Rep5 1153.5444107514497 1153.5433099358602 88.29 2 0.1825383193097825 0.0006801564359802754 0.9438714419765777 ['ENST00000590152.1_1_19:9267931-9272106:+|nuORF', 'nc|ENSG00000130803|Q96PQ6-2|ZNF317', 'ENSG00000130803|ENST00000247956|ZNF317', 'nc|ENSG00000130803|Q96PQ6-3|ZNF317', 'nc|ENSG00000130803|Q96PQ6-4|ZNF317', 'ENST00000591278.5_1_19:9268612-9272106:+|nuORF', 'ZNF317|p.G176C|1|0.09|ENSG00000130803|chr19:9160171-9160171|G/T|missense_variant'] 132247 18364 VYKTIMEQF True PC9_epitope_Rep5 1157.57908200801 1157.5779899358602 75.656 2 0.18252947772534184 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 99510 4369 SLESINSR True NCI_RA007_Epitope_Rep5 904.46140940348 904.46030993586 23.422 2 0.1825255869445904 0.0006801564359802754 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 40423 11621 HRYGDSEFTV True PC9_epitope_Rep3 1209.54145062933 1209.5403499358601 49.716 2 0.18251821358314782 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 43653 22718 IILPEDIEL True PC9_epitope_Rep1 1053.59577761797 1053.59468993586 92.189 2 0.18251022121477312 0.0006801564359802754 0.9438714419765777 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 72164 21812 MRLGSIFGL True PC9_epitope_Rep5 992.5477223100798 992.54662993586 88.932 2 0.18250956594168802 0.0006801564359802754 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000451892.1_1_1:240307039-240307453:-|nuORF'] 106733 19637 SYDPDFNQL True PC9_epitope_Rep3 1097.46655435357 1097.46544993586 80.771 2 0.18250215250479418 0.0006801564359802754 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 94792 10700 RYLQTLTTI True NCI_RA007_Epitope_Rep3 1107.62880908175 1107.6277099358601 49.134 2 0.1824934734973957 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 103526 10697 SRDDNM[Oxidation]FQI True PC9_epitope_Rep6 1140.48697290876 1140.4858699358601 51.958 2 0.18249125528870896 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 48712 4469 KEMPVKVEA True H1975_Epitope_Rep2 1029.5528672601697 1029.5517699358602 22.303 2 0.18248833267471568 0.0006801564359802754 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant', 'nc|ENSG00000133704|O15397-2|IPO8'] 99977 20073 SLIRNLEQL True PC9_epitope_Rep3 1084.62405805448 1084.62296993586 82.461 2 0.18248188919607145 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 128333 10243 VSDKTLSFY True H1975_Epitope_Rep2 1058.52842633414 1058.52732993586 44.405 2 0.18246863016360731 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 87055 14052 QSDPWQQELY True H1975_Epitope_Rep3 1292.5673310240002 1292.5667749679299 59.374 1 0.18246402077827872 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000578711.1_1_17:7128236-7128413:+|nuORF', 'ENST00000578033.1_1_17:7127960-7128413:+|nuORF', 'ENST00000578319.5_1_17:7127738-7128413:+|nuORF'] 94870 13252 RYNPNLNTW True PC9_epitope_Rep2 1176.5676058075198 1176.56650993586 56.249 2 0.1824640056422713 0.0006801564359802754 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 116810 20370 TYLSIIHSL True PC9_epitope_Rep2 1045.58079626017 1045.5796899358602 83.776 2 0.18246305066343607 0.0006801564359802754 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 138956 9628 YSELASHVVSY True H1975_Epitope_Rep3 1253.59281749585 1253.59172993586 42.05 2 0.1824585697874904 0.0006801564359802754 0.9438714419765777 ['ENSG00000065618|ENST00000648076|COL17A1', 'nc|ENSG00000065618|Q9UMD9-2|COL17A1'] 28950 9072 FTEQYNEQY True H1975_Epitope_Rep2 1220.4985827578398 1220.4974899358601 39.849 2 0.18245586199949515 0.0006801564359802754 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 25383 7308 FEIIDDHRA True H1975_Epitope_Rep3 1114.54072235334 1114.5396299358601 33.083 2 0.1824510449750153 0.0006801564359802754 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000492525.1_1_8:29974982-29975219:-|nuORF', 'ENST00000406202.2_1_6:157297523-157298164:+|nuORF'] 136200 20437 YGLPVVVKL True PC9_epitope_Rep3 986.6164534929 986.61534993586 83.866 2 0.1824459486525162 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 127123 19023 VQDEFLEKL True PC9_epitope_Rep5 1119.5811901829898 1119.58008993586 78.199 2 0.18243391581252705 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 5121 23364 ALMDLLLRL True PC9_epitope_Rep5 1056.63653731448 1056.6354299358602 94.854 2 0.1824301330626495 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2'] 113324 18954 TQINVGNLEL True PC9_epitope_Rep6 1099.5873381925899 1099.58624993586 85.553 2 0.18242337220463975 0.0006801564359802754 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF'] 94706 8026 RYLEQLHQL True NCI_RA007_Epitope_Rep3 1198.64585612822 1198.64474993586 38.663 2 0.1824222406174501 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 89221 8218 REIQEAIAVA True H1975_Epitope_Rep1 1098.6033226098998 1098.6022299358601 36.554 2 0.1824199046841743 0.0006801564359802754 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 138255 10974 YQVAAAESHPL True PC9_epitope_Rep5 1184.5825871653199 1184.5814899358602 47.2 2 0.18241782841337298 0.0006801564359802754 0.9438714419765777 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 99933 21129 SLIFKLEEL True PC9_epitope_Rep2 1090.6274120994199 1090.62630993586 86.731 2 0.18241283341240794 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2'] 40589 6968 HTDGNNIYV True PC9_epitope_Rep4 1031.4672230599099 1031.4661299358602 34.042 2 0.18241029731287978 0.0006801564359802754 0.9438714419765777 ['ENSG00000048405|ENST00000265827|ZNF800'] 106984 17471 SYLERHGLINF True PC9_epitope_Rep2 1347.6935345966297 1347.6924299358602 72.454 2 0.18240162064722945 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 1930 6042 AEIPAGPGREP True H1975_Epitope_Rep1 1092.55637241748 1092.55526993586 28.314 2 0.18239654891470106 0.0006801564359802754 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF', 'ENST00000486701.1_1_2:27663271-27663376:+|nuORF'] 9258 3865 AVQRTLLEK True NCI_RA007_Epitope_Rep3 1056.6291434349198 1056.6280499358602 21.454 2 0.1823964655577387 0.0006801564359802754 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 93621 6772 RTDPVVADY True H1975_Epitope_Rep2 1034.50327421546 1034.5021699358601 30.964 2 0.18239590752437787 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 28421 9833 FSEDGYRTV True PC9_epitope_Rep2 1072.48253877088 1072.4814499358602 43.159 2 0.182389868647686 0.0006801564359802754 0.9438714419765777 ['ENSG00000180340|ENST00000315323|FZD2'] 2117 8443 AELQRLVAA True H1975_Epitope_Rep3 969.5607295219298 969.55962993586 37.461 2 0.1823873590081738 0.0006801564359802754 0.9438714419765777 ['ENSG00000150779|ENST00000504148|TIMM8B'] 41577 6363 IDEPLEGSEDR True H1975_Epitope_Rep1 1258.56772494682 1258.5666299358602 29.537 2 0.18238448309761524 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 28832 11827 FTDIDGQVY True H1975_Epitope_Rep3 1056.4763907612798 1056.47528993586 50.637 2 0.18238168422452614 0.0006801564359802754 0.9438714419765777 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 87944 4604 QVQAAQFAK True NCI_RA007_Epitope_Rep5 989.5294293936498 989.52832993586 24.381 2 0.18237428498520236 0.0006801564359802754 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1'] 48044 5805 KALPLTKV True NCI_RA007_Epitope_Rep4 868.57458868092 868.57348993586 28.953 2 0.18237342073808085 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100227|Q9BY77-2|POLDIP3', 'ENSG00000100227|ENST00000252115|POLDIP3'] 23881 7251 EYMKHTRLF True NCI_RA007_Epitope_Rep4 1223.6121134717898 1223.61046490379 34.526 3 0.1823721934142818 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 42468 4133 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 21.02 2 0.1823713418951659 0.0006801564359802754 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 83104 20674 PYNPILGETF True PC9_epitope_Rep4 1149.57062549929 1149.5695299358601 87.68 2 0.18237008511125058 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 110089 20026 TIAEIKNLF True PC9_epitope_Rep2 1047.59644632431 1047.5953499358602 82.434 2 0.1823674152041901 0.0006801564359802754 0.9438714419765777 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000601652.5_1_19:14640444-14674077:+|nuORF'] 38795 6913 HHYSGNNIEL True PC9_epitope_Rep4 1182.5417849825 1182.5406899358602 33.815 2 0.1823632114333864 0.0006801564359802754 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 140658 20677 YYPNPPLVL True PC9_epitope_Rep4 1074.57498260374 1074.57388993586 87.693 2 0.18235376324460575 0.0006801564359802754 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 47512 13509 IYLLIHNNF True NCI_RA007_Epitope_Rep3 1145.62332977849 1145.62222993586 60.427 2 0.18235083146804112 0.0006801564359802754 0.9438714419765777 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 64999 7929 LSDGVAVLK True NCI_RA007_Epitope_Rep1 900.5280324113199 900.52692993586 34.835 2 0.1823456357597979 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 48975 20349 KFAEEFYSF True PC9_epitope_Rep5 1166.5284263341398 1166.52732993586 83.307 2 0.18233777638767656 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 95369 15237 SAIDRIFTL True H1975_Epitope_Rep1 1034.5760452329 1034.57494993586 63.873 2 0.1823356806726865 0.0006801564359802754 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3'] 25352 14340 FEGIVTDLIR True H1975_Epitope_Rep1 1161.63937376545 1161.63826993586 60.349 2 0.18233519998120212 0.0006801564359802754 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 40576 13186 HTDAVWGLAY True H1975_Epitope_Rep3 1131.53490869691 1131.53380993586 55.971 2 0.18233275910163288 0.0006801564359802754 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'nc|ENSG00000196792|Q13033-2|STRN3', 'ENSG00000196792|ENST00000357479|STRN3'] 92342 8279 RQPDSGISSI True PC9_epitope_Rep2 1058.5356369729 1058.53452993586 37.203 2 0.18233076990412536 0.0006801564359802754 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 76163 6573 NRSEVQANL True PC9_epitope_Rep1 1029.52032126193 1029.51922993586 30.086 2 0.18232889989345916 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7', 'SMG7|p.V670Pfs*161|1|0.17|ENSG00000116698|chr1:183544947-183544951|TATGT/-|frameshift_variant'] 17340 5833 EHDPVGQM[Oxidation]V True PC9_epitope_Rep5 1026.4440454676198 1026.44294993586 27.429 2 0.1823285042177336 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 37645 6370 HADVSNQLY True H1975_Epitope_Rep3 1045.48287312405 1045.48176993586 29.486 2 0.18231558322194902 0.0006801564359802754 0.9438714419765777 ['ENSG00000147416|ENST00000276390|ATP6V1B2'] 64035 9654 LQDFFNGK True NCI_RA007_Epitope_Rep2 967.4763311916299 967.4752299358599 42.169 2 0.1823084621261768 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 98287 4763 SIFKQPVTK True NCI_RA007_Epitope_Rep5 1046.61243074162 1046.61132993586 25.004 2 0.18230707625154438 0.0006801564359802754 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF', 'ENSG00000134046|ENST00000256429|MBD2'] 40451 7705 HSDPESDFY True H1975_Epitope_Rep3 1095.41451878071 1095.41397496793 34.621 1 0.18230413179123053 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 90687 12979 RKLMMILAM True NCI_RA007_Epitope_Rep4 1105.6173991763699 1105.61630993586 57.024 2 0.1822878448459733 0.0006801564359802754 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 19954 13013 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep1 1154.4801561928198 1154.47904993586 55.137 2 0.18228378425335948 0.0006801564359802754 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 54252 19591 KYPENFFLL True PC9_epitope_Rep6 1169.61209638845 1169.61098993586 88.02 2 0.18228283379210308 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 34825 19623 GQVEDVVGNL True PC9_epitope_Rep5 1028.5138388991597 1028.51274993586 80.532 2 0.18228179721251372 0.0006801564359802754 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 23644 16964 EYGIFNQKI True PC9_epitope_Rep4 1110.57095985246 1110.5698699358602 73.243 2 0.1822761172761373 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 68130 11384 LTPKLFHEV True PC9_epitope_Rep4 1082.6124307416198 1082.61132993586 51.561 2 0.1822759158001338 0.0006801564359802754 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 93951 8598 RVLQALEGLK True NCI_RA007_Epitope_Rep5 1125.6869926642098 1125.6858899358601 39.749 2 0.18227350329631947 0.0006801564359802754 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19'] 34463 14340 GQDEPLIHV True PC9_epitope_Rep3 1006.5083595958998 1006.50726993586 60.244 2 0.1822721495874517 0.0006801564359802754 0.9438714419765777 ['ENSG00000157778|ENST00000288607|PSMG3'] 101316 20520 SLYKSFLQL True PC9_epitope_Rep2 1097.6120963884498 1097.61098993586 84.361 2 0.1822631212293278 0.0006801564359802754 0.9438714419765777 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 75955 20791 NRGDFFMTL True PC9_epitope_Rep3 1099.51206507735 1099.5109699358602 85.244 2 0.18225654050402995 0.0006801564359802754 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000380393.7_1_20:2844875-2903853:+|nuORF'] 70908 10679 MELERIVSA True H1975_Epitope_Rep2 1046.5430308524599 1046.54192993586 46.1 2 0.18225648782930737 0.0006801564359802754 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 17273 21795 EHDAFIFAL True PC9_epitope_Rep5 1061.51819600361 1061.5170899358602 88.866 2 0.18225099542019235 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 21374 6825 ERMAGNEAL True PC9_epitope_Rep1 989.4600295044899 989.4589299358599 31.058 2 0.18224746570408618 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 10928 14649 DAVLLVFANK True NCI_RA007_Epitope_Rep1 1088.62299542532 1088.62188993586 61.035 2 0.1822460210315097 0.0006801564359802754 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 54164 18355 KYNLINEYF True PC9_epitope_Rep6 1202.5971746003 1202.5960699358602 83.245 2 0.18224501744058488 0.0006801564359802754 0.9438714419765777 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 105928 19077 SVLDVDGMKV True PC9_epitope_Rep5 1061.54269649929 1061.5415899358602 78.409 2 0.18223034840696214 0.0006801564359802754 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 130718 12630 VVDLLAPYAK True NCI_RA007_Epitope_Rep1 1087.62774645259 1087.62664993586 53.108 2 0.18222993051086608 0.0006801564359802754 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 34970 5351 GQYGNPLNK True NCI_RA007_Epitope_Rep5 989.4930438849299 989.49194993586 27.274 2 0.1822250799164056 0.0006801564359802754 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 15057 8067 EAALSTALSEK True NCI_RA007_Epitope_Rep1 1118.58191845898 1118.58082993586 35.377 2 0.18221970509534718 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 105938 14093 SVLEPPLFLK True NCI_RA007_Epitope_Rep3 1141.6746966450098 1141.67358993586 62.73 2 0.18221161836647887 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 91539 18890 RPADVIFATV True PC9_epitope_Rep2 1087.60259433391 1087.6014899358602 78.025 2 0.18220596954333448 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 106045 19225 SVLQSIEKI True PC9_epitope_Rep3 1015.5913609438699 1015.59026993586 79.169 2 0.18219796892592502 0.0006801564359802754 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 77216 18550 NYIDKVRFL True PC9_epitope_Rep1 1166.64479349906 1166.64313490379 76.142 3 0.18219539494129308 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 40629 6803 HTFYNELR True NCI_RA007_Epitope_Rep2 1078.5195929859399 1078.51848993586 31.078 2 0.18219536271176165 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'POTEF|p.H787N|1|0.21|ENSG00000196604|chr2:130075113-130075113|G/T|missense_variant', 'ACTB|p.P98S|1|0.15|ENSG00000075624|chr7:5529232-5529232|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 75814 19043 NRDELELEL True PC9_epitope_Rep3 1129.5615173675699 1129.5604299358602 78.469 2 0.18219379562439664 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 47877 7069 IYTSSVNRL True NCI_RA007_Epitope_Rep5 1051.56620882519 1051.5651099358602 33.872 2 0.182192540878155 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 4373 8703 AIQLPISSK True NCI_RA007_Epitope_Rep3 955.5702315764701 955.56912993586 41.316 2 0.18219216360509788 0.0006801564359802754 0.9438714419765777 ['ENST00000518468.1_3_8:53599460-53658116:-|nuORF'] 115097 20577 TTVDHFWGL True PC9_epitope_Rep5 1074.51344497634 1074.5123499358601 84.196 2 0.18218377608273745 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.P444Afs*17|1|0.44|ENSG00000164828|chr7:853570-853571|-/G|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 18589 8819 ELAEDDSILK True H1975_Epitope_Rep1 1131.5659340416698 1131.5648299358602 38.844 2 0.1821824688770309 0.0006801564359802754 0.9438714419765777 ['ENST00000515116.1_1_4:666291-667257:-|nuORF', 'ENSG00000169020|ENST00000304312|ATP5ME', 'ENST00000505852.1_1_4:666291-668103:-|nuORF'] 140444 13592 YYFPVKNVI True NCI_RA007_Epitope_Rep5 1141.6171817688898 1141.6160899358601 58.968 2 0.18218159225499336 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 24405 22541 FAFQAEIAQL True PC9_epitope_Rep1 1136.5866099165999 1136.58550993586 91.506 2 0.18217615406657536 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 137990 20699 YQAPDIDVQL True PC9_epitope_Rep2 1160.57135377528 1160.5702499358601 85.055 2 0.18215911936348528 0.0006801564359802754 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 40443 7562 HSDPESDFY True H1975_Epitope_Rep1 1095.41451878071 1095.4134299358602 34.081 2 0.1821572673743176 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 42233 3268 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 17.259 2 0.18214692711980796 0.0006801564359802754 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 60649 8787 LITPAVVSER True H1975_Epitope_Rep3 1083.62880908175 1083.6277099358601 38.805 2 0.1821439722258216 0.0006801564359802754 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 40096 17592 HRDFISVTL True PC9_epitope_Rep5 1086.5821932425 1086.58108993586 72.676 2 0.18213942417172244 0.0006801564359802754 0.9438714419765777 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000545096.1_1_9:139981559-139982655:+|nuORF', 'MAN1B1|p.K129Nfs*49|1|0.31|ENSG00000177239|chr9:137088924-137088924|A/-|frameshift_variant'] 11988 7409 DHVTATQL True PC9_epitope_Rep3 883.4399456829101 883.43884993586 33.505 2 0.18213559885960387 0.0006801564359802754 0.9438714419765777 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant'] 40363 6607 HRTELETKL True PC9_epitope_Rep3 1125.61422164677 1125.61258490379 30.439 3 0.1821349175931963 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 89376 9162 REMEENFAVEA True H1975_Epitope_Rep1 1323.57651580871 1323.57540993586 40.148 2 0.18213256817346696 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 21641 9304 ERTNIQVTV True PC9_epitope_Rep4 1058.57202248162 1058.57092993586 43.396 2 0.18213036264544152 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 109845 11333 THLLNQDTL True PC9_epitope_Rep4 1053.54547338061 1053.54436993586 51.371 2 0.1821301324847987 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 9836 14062 AYLLNLNHL True NCI_RA007_Epitope_Rep4 1069.59202965021 1069.59092993586 61.372 2 0.18212263478072085 0.0006801564359802754 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 8126 9396 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51227496793 41.106 1 0.18212049963441077 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 67105 11725 LTDDDLLRY True H1975_Epitope_Rep1 1122.55570371114 1122.55460993586 50.092 2 0.1821118971451753 0.0006801564359802754 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 43395 12080 IHSENFQTL True PC9_epitope_Rep1 1087.5298233164701 1087.5287299358602 51.326 2 0.18209654270350473 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 115878 7727 TVPAYFNDSQR True H1975_Epitope_Rep1 1296.6098645423199 1296.6087699358602 34.683 2 0.18209287617548925 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'HSPA2|p.D209Rfs*26|1|0.14|ENSG00000126803|chr14:64541469-64541470|-/T|frameshift_variant', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 39967 13441 HQQSIPAVL True PC9_epitope_Rep3 991.5450794577898 991.5439899358599 56.747 2 0.1820870236311994 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 90464 17633 RITNQVIYL True PC9_epitope_Rep1 1118.64479349906 1118.64368993586 72.618 2 0.18208677737441364 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 116993 15865 TYPYLQHEI True PC9_epitope_Rep5 1162.5658744720201 1162.56476993586 66.017 2 0.1820840214522104 0.0006801564359802754 0.9438714419765777 ['PMEPA1|p.S209Qfs*3|1|0.15|ENSG00000124225|chr20:57652292-57652293|-/G|frameshift_variant', 'nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 85145 15411 QITVNDLPVGR True PC9_epitope_Rep3 1210.6669854956199 1210.6658899358602 64.433 2 0.1820761522688573 0.0006801564359802754 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 67293 5961 LTDPEAAKY True H1975_Epitope_Rep3 1006.4971262058598 1006.49602993586 27.94 2 0.1820747063524843 0.0006801564359802754 0.9438714419765777 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1', 'nc|ENSG00000177628|P04062-3|GBA1', 'ENST00000566701.5_1_1:155184905-155187601:-|nuORF', 'ENST00000486197.5_1_1:155184905-155187358:-|nuORF', 'ENST00000459805.5_1_1:155184905-155186549:-|nuORF', 'chr1:155236469-155237344|103|12.02|0.59|4.35|-|0|GBA1,None|1'] 53952 20962 KYITDWQNVF True PC9_epitope_Rep3 1312.6451874218799 1312.6440899358602 85.91 2 0.18207090063080508 0.0006801564359802754 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 53093 11292 KSDVEAIFSK True PC9_epitope_Rep3 1122.5920892198599 1122.59044490379 48.44 3 0.1820644833728768 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 49525 6108 KKFGGVQEL True NCI_RA007_Epitope_Rep4 1004.5654805491998 1004.56438993586 30.108 2 0.18206168463818134 0.0006801564359802754 0.9438714419765777 ['ENSG00000124596|ENST00000424266|OARD1', 'ENST00000465893.1_1_6:41037763-41039373:-|nuORF'] 6121 9582 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 41.809 2 0.18206156290776768 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 139833 5203 YVDGVEVHN True NCI_RA007_Epitope_Rep5 1030.47197408718 1030.47086993586 26.71 2 0.1820600977892743 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 138228 15039 YQTEIGQTL True PC9_epitope_Rep4 1051.51858992643 1051.51807496793 65.779 1 0.18205545949915777 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 114821 19514 TTDFIFNLY True H1975_Epitope_Rep3 1132.54407639828 1132.54357496793 81.776 1 0.18205137467328875 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 89280 3922 RELEVQHPA True NCI_RA007_Epitope_Rep4 1077.55670677065 1077.55560993586 21.318 2 0.1820507627076664 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 60367 21908 LIIDEIHLL True PC9_epitope_Rep5 1077.64339651673 1077.6422899358602 89.309 2 0.18204701435090828 0.0006801564359802754 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3'] 94535 22822 RYILEPFFI True PC9_epitope_Rep1 1196.65938093404 1196.65828993586 92.588 2 0.18204688201993394 0.0006801564359802754 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 28032 16308 FRAPQVMTY True PC9_epitope_Rep1 1111.54845058607 1111.5473499358602 67.548 2 0.1820434788703491 0.0006801564359802754 0.9438714419765777 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263'] 112843 5538 TPMPSRPSTTP True NCI_RA007_Epitope_Rep5 1170.57030822946 1170.56920993586 27.988 2 0.18204332013818827 0.0006801564359802754 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 75775 6049 NRAPNTAEL True PC9_epitope_Rep5 984.4988575413599 984.49776993586 28.259 2 0.18204021598217576 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 113830 12442 TREEGTPLTL True PC9_epitope_Rep1 1115.5822528121498 1115.5811499358601 52.723 2 0.18201872009208545 0.0006801564359802754 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 134357 11888 WSEEASGITY True H1975_Epitope_Rep2 1141.49276910141 1141.49166993586 50.807 2 0.1820180215048166 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'ENST00000506241.1_1_5:55251841-55256299:-|nuORF', 'nc|ENSG00000134352|P40189-2|IL6ST'] 14904 13266 DYKESFNTI True PC9_epitope_Rep6 1115.5135045459901 1115.5124099358602 62.679 2 0.1820158852029086 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 14004 9251 DRTGTGTLSV True PC9_epitope_Rep5 1005.50908787189 1005.50798993586 40.532 2 0.18200148502826427 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 139101 10269 YSNKEIFL True H1975_Epitope_Rep3 1012.5229470308799 1012.52184993586 44.55 2 0.18200102885037825 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 68882 8580 LVEIAQVPK True H1975_Epitope_Rep3 995.60153170475 995.60042993586 37.993 2 0.1820002189799725 0.0006801564359802754 0.9438714419765777 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 88537 12509 RAFPALTSL True NCI_RA007_Epitope_Rep5 974.5549158655 974.55380993586 54.771 2 0.18199456652680152 0.0006801564359802754 0.9438714419765777 ['ENSG00000170458|ENST00000302014|CD14'] 87332 18413 QTAPEEAFIKL True PC9_epitope_Rep4 1245.6605031328497 1245.6594099358601 78.893 2 0.1819944214851174 0.0006801564359802754 0.9438714419765777 ['TTC30B|p.A478Cfs*6|1|0.11|ENSG00000196659|chr2:177551332-177551333|-/A|frameshift_variant', 'TTC30A|p.A478Cfs*6|1|0.12|ENSG00000197557|chr2:177617270-177617271|-/A|frameshift_variant', 'ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 105468 6873 SVASPFTSK True NCI_RA007_Epitope_Rep2 922.4759968384601 922.47488993586 31.35 2 0.1819903958838915 0.0006801564359802754 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4', 'ENSG00000187527|ENST00000342358|ATP13A5'] 114479 11849 TSETPDYLLKY True H1975_Epitope_Rep3 1328.6499980188 1328.64890993586 50.725 2 0.18198978337893487 0.0006801564359802754 0.9438714419765777 ['ENSG00000105656|ENST00000262809|ELL'] 1908 10866 AEIMKTLEV True H1975_Epitope_Rep2 1032.5525329069999 1032.5514299358601 46.826 2 0.18198776573949352 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 138340 11269 YRAQPSVSL True PC9_epitope_Rep3 1019.5399940773499 1019.53888993586 48.353 2 0.18198549678821135 0.0006801564359802754 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 97661 9182 SHDDGNIDL True PC9_epitope_Rep5 984.41485313388 984.41374993586 40.264 2 0.18198425643822821 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 138358 15464 YRDENLVTI True PC9_epitope_Rep1 1121.57168812845 1121.5705899358602 64.303 2 0.18198068908387588 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5', 'ENST00000502747.1_1_5:79454657-79462329:-|nuORF'] 31303 8373 GDYPLEAVR True H1975_Epitope_Rep1 1018.5083595959 1018.50726993586 37.134 2 0.18197983032054282 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 113206 7262 TQDPTVTRL True PC9_epitope_Rep6 1029.5454733806098 1029.54436993586 37.061 2 0.1819789028423485 0.0006801564359802754 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 75070 21093 NMLPQIFRV True PC9_epitope_Rep5 1116.6113851958 1116.61028993586 86.197 2 0.18197018146944371 0.0006801564359802754 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 132018 13527 VYGSFASKL True PC9_epitope_Rep2 970.5123823471799 970.51128993586 57.324 2 0.1819666209546996 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 116799 21325 TYLPTSPLL True PC9_epitope_Rep2 1003.55899818643 1003.55847496793 87.491 1 0.1819597634200741 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 124313 13533 VLDNPSPFY True H1975_Epitope_Rep3 1050.5022115863 1050.5016749679298 57.334 1 0.18195102569983942 0.0006801564359802754 0.9438714419765777 ['ENST00000511766.2_1_6:119215493-119222091:+|nuORF', 'ENSG00000111875|ENST00000229595|ASF1A'] 67241 16290 LTDLVDDNYF True H1975_Epitope_Rep3 1213.5502839775302 1213.54977496793 68.131 1 0.18194817704252947 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 92220 17756 RQIDQFLVV True PC9_epitope_Rep6 1116.62914343492 1116.6280499358602 80.932 2 0.18193642548177869 0.0006801564359802754 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 33814 6851 GLTSVINQK True H1975_Epitope_Rep3 958.5447451046199 958.54364993586 31.31 2 0.1819263964312873 0.0006801564359802754 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 131953 10453 VYFSKSEQL True PC9_epitope_Rep6 1099.5549754351498 1099.5538699358601 50.959 2 0.18191959840767533 0.0006801564359802754 0.9438714419765777 ['ENSG00000142627|ENST00000358432|EPHA2'] 106146 17321 SVPDPELIKTV True PC9_epitope_Rep3 1196.66525416012 1196.66414993586 71.799 2 0.1819173365169705 0.0006801564359802754 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 75820 19685 NRDEMLVVL True PC9_epitope_Rep1 1087.5695799534699 1087.56848993586 80.542 2 0.18191277871357678 0.0006801564359802754 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 77424 17691 NYM[Oxidation]PGQLTI True PC9_epitope_Rep4 1051.50083206775 1051.4997299358602 76.073 2 0.18190895423409448 0.0006801564359802754 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 28173 19885 FRNIPGITL True PC9_epitope_Rep1 1029.5971150306498 1029.5960099358601 81.306 2 0.18190741785283432 0.0006801564359802754 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 57668 6968 LEM[Oxidation]ILNKPGLK True H1975_Epitope_Rep1 1270.7318946317398 1270.73023490379 31.843 3 0.18190047899385625 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|317|31.41|0.67|5.55|+|ENST00000380859|AKR1C1,AKR1C1', 'chr10:4963893-4965914|317|27.99|0.97|4.85|+|ENST00000380859|AKR1C1,AKR1C1'] 130709 15197 VVDIQGVGDLY True H1975_Epitope_Rep3 1176.6026539035597 1176.60154993586 63.858 2 0.18189827928032104 0.0006801564359802754 0.9438714419765777 ['ENSG00000103319|ENST00000263026|EEF2K'] 4410 13513 AIVDKVPSV True PC9_epitope_Rep1 926.54368247546 926.54258993586 56.834 2 0.18188213225573316 0.0006801564359802754 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 109643 13341 THDLVGPEL True PC9_epitope_Rep2 979.49746055903 979.49636993586 56.589 2 0.18187811679642935 0.0006801564359802754 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 137620 10031 YLVLDEADR True NCI_RA007_Epitope_Rep1 1092.54513902744 1092.5440499358601 43.026 2 0.18187572510011712 0.0006801564359802754 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'ENST00000418231.2_1_X:73350641-73351442:+|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF', 'nc|ENSG00000152670|Q9NQI0-3|DDX4', 'nc|ENSG00000152670|Q9NQI0-2|DDX4', 'nc|ENSG00000152670|Q9NQI0-4|DDX4', 'ENSG00000152670|ENST00000505374|DDX4'] 72628 12373 MVVQDGIVKA True PC9_epitope_Rep3 1058.57941636118 1058.57830993586 52.622 2 0.18187462733145532 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 49402 19992 KILDYEVTL True PC9_epitope_Rep5 1092.6066766548402 1092.60556993586 81.954 2 0.1818725517342606 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'ENST00000503773.6_1_5:55236912-55256289:-|nuORF', 'ENST00000506241.1_1_5:55251841-55256299:-|nuORF'] 94957 10056 RYPTSIASL True NCI_RA007_Epitope_Rep5 1006.5447451046199 1006.54364993586 45.319 2 0.18187143911770512 0.0006801564359802754 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 53077 10074 KSDLFFHDY True H1975_Epitope_Rep3 1170.53457434374 1170.53346993586 43.788 2 0.1818670264045833 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 132174 8232 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 41.247 3 0.1818641700323717 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 72265 19535 MSDLLSPLLY True H1975_Epitope_Rep3 1150.59439771898 1150.5933099358601 81.855 2 0.18186189939742775 0.0006801564359802754 0.9438714419765777 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 129237 8410 VTDMSDAEQY True H1975_Epitope_Rep2 1157.45466934053 1157.45356993586 37.302 2 0.18185780502277307 0.0006801564359802754 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 97883 13850 SHLQQPLMV True PC9_epitope_Rep1 1051.54845058607 1051.5473499358602 58.116 2 0.18185499563562083 0.0006801564359802754 0.9438714419765777 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 33219 15163 GLADNTVIAKV True PC9_epitope_Rep2 1099.62372370131 1099.62262993586 63.582 2 0.18184842877113946 0.0006801564359802754 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 89184 2764 REIEDPEDRKP True H1975_Epitope_Rep3 1382.6790067312995 1382.67736490379 14.716 3 0.18184259474274567 0.0006801564359802754 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'nc|ENSG00000127022|P27824-3|CANX'] 92264 18198 RQLDMELVSV True PC9_epitope_Rep4 1188.61725842188 1188.6161699358602 78.067 2 0.18184227204489242 0.0006801564359802754 0.9438714419765777 ['ENSG00000089902|ENST00000262241|RCOR1'] 104929 13888 STFVLDEFKR True PC9_epitope_Rep6 1240.6451874218799 1240.6435349037902 65.256 3 0.1818378475991886 0.0006801564359802754 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 108365 8924 TEDPNQLTV True H1975_Epitope_Rep1 1015.4822044177099 1015.48110993586 39.231 2 0.1818333188241557 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2', 'NFE2L2|p.S270L|1|0.31|ENSG00000116044|chr2:177231794-177231794|G/A|missense_variant'] 109707 20295 THFLQPIYL True PC9_epitope_Rep2 1130.6124307416198 1130.61132993586 83.486 2 0.18182898832095168 0.0006801564359802754 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 73156 9073 NEDLRSWTA True H1975_Epitope_Rep1 1090.50433684462 1090.5032299358602 39.804 2 0.18182595577969624 0.0006801564359802754 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 94844 17734 RYMPQNPCII True PC9_epitope_Rep5 1233.5998345359299 1233.59872993586 73.232 2 0.18182334954081064 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000398588.2_1_6:58446590-58447106:-|nuORF'] 94467 10363 RYGLVTNEI True NCI_RA007_Epitope_Rep2 1063.56620882519 1063.5651099358602 44.901 2 0.18182303542568273 0.0006801564359802754 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 132880 18684 VYTSKSDVWSF True PC9_epitope_Rep2 1317.62411762413 1317.6230299358601 77.236 2 0.18182217936815112 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 70353 22232 LYPSIIQEF True PC9_epitope_Rep2 1108.580461907 1108.57987496793 90.992 1 0.1818207293430445 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 128322 8507 VSDFRKEFY True H1975_Epitope_Rep2 1189.5767735088898 1189.57513490379 37.676 3 0.18181580509222275 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000093009|O75419-2|CDC45', 'ENSG00000093009|ENST00000263201|CDC45', 'nc|ENSG00000093009|O75419-3|CDC45', 'ENST00000491520.5_1_22:19467485-19467677:+|nuORF'] 53735 8650 KYEELQIT True NCI_RA007_Epitope_Rep1 1022.5284263341399 1022.5273299358599 37.647 2 0.18181548584753998 0.0006801564359802754 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 54149 20639 KYNDNFFGL True PC9_epitope_Rep1 1116.5240096600398 1116.52290993586 84.209 2 0.1818011209082963 0.0006801564359802754 0.9438714419765777 ['ENSG00000012963|ENST00000013070|UBR7'] 71126 18244 M[Oxidation]ETVWTILP True H1975_Epitope_Rep3 1104.55253328744 1104.5514299358601 76.461 2 0.1817980048255281 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 112283 12181 TLYVGNLSR True PC9_epitope_Rep1 1021.5556441414899 1021.55454993586 51.712 2 0.1817945725082837 0.0006801564359802754 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000496452.5_1_2:70456348-70475673:-|nuORF', 'ENST00000481650.1_1_2:70456348-70475673:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1'] 104512 7262 SSQSLSFPK True NCI_RA007_Epitope_Rep4 979.49746055903 979.49636993586 34.57 2 0.18178922918386364 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110756|Q9UPZ3-2|HPS5', 'ENSG00000110756|ENST00000349215|HPS5'] 124809 19029 VLLGKVYVV True PC9_epitope_Rep5 988.63210355704 988.63100993586 78.223 2 0.1817862606913998 0.0006801564359802754 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24|p.G413S|1|0.3|ENSG00000114796|chr3:183671046-183671046|G/A|missense_variant'] 132951 21698 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep5 1230.58422733854 1230.5831299358601 88.509 2 0.18178582262116807 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 88294 22609 QYILFPLRF True PC9_epitope_Rep1 1195.67536535135 1195.6742699358601 91.775 2 0.18177549583319927 0.0006801564359802754 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 130602 16914 VVAEELENV True PC9_epitope_Rep3 1000.50769088956 1000.50658993586 70.216 2 0.18176845581187437 0.0006801564359802754 0.9438714419765777 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.R96H|1|0.24|ENSG00000167196|chr15:75913210-75913210|G/A|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 131503 18123 VVVDPIQSV True PC9_epitope_Rep4 954.53859709502 954.53750993586 77.774 2 0.18176402042866313 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 61302 7350 LLDVRDRDSY True H1975_Epitope_Rep3 1250.62551460646 1250.62440993586 33.249 2 0.18175458290307017 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 35133 7646 GRYAGEESL True PC9_epitope_Rep1 980.4563240230399 980.45522993586 34.233 2 0.18174424688392146 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 74719 24696 NLLDLLTEV True PC9_epitope_Rep1 1028.57537652656 1028.5748749679299 99.881 1 0.1817441120931152 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 139024 12077 YSHPGVVFL True H1975_Epitope_Rep2 1017.5283667644899 1017.52726993586 51.536 2 0.1817423023951629 0.0006801564359802754 0.9438714419765777 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 72108 9983 MRDPQTEEF True PC9_epitope_Rep5 1151.49172355559 1151.4906299358602 43.375 2 0.18173983790373702 0.0006801564359802754 0.9438714419765777 ['ENSG00000102241|ENST00000218364|HTATSF1', 'HTATSF1|p.N703Rfs*5|1|0.52|ENSG00000102241|chrX:136511853-136511854|AT/-|frameshift_variant'] 81473 19056 PQPDVFPLF True NCI_RA007_Epitope_Rep4 1058.54368247546 1058.5425899358602 82.427 2 0.1817359925784148 0.0006801564359802754 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 89781 15139 RFEEAHFTF True PC9_epitope_Rep2 1182.5458077337796 1182.54415490379 63.491 3 0.18173550481913836 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 101911 11267 SPLLLQAKA True PC9_epitope_Rep4 939.5753169569099 939.57420993586 51.115 2 0.1817126144572328 0.0006801564359802754 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 69920 20430 LYDIILKNF True PC9_epitope_Rep4 1137.64339651673 1137.6422899358602 86.731 2 0.18171145568971903 0.0006801564359802754 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 89627 8840 RETETVFVP True NCI_RA007_Epitope_Rep3 1076.5502244078798 1076.54912993586 41.864 2 0.18170599558511527 0.0006801564359802754 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 105640 21023 SVFKDFYEL True PC9_epitope_Rep1 1146.55972646242 1146.5586299358602 85.693 2 0.18170510261411796 0.0006801564359802754 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB'] 71550 5627 M[Oxidation]LDHQPPQY True H1975_Epitope_Rep1 1143.50189469691 1143.5007899358602 26.712 2 0.18170397070463556 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108604|Q92925-3|SMARCD2', 'nc|ENSG00000108604|Q92925-2|SMARCD2', 'ENSG00000108604|ENST00000448276|SMARCD2'] 53944 7734 KYISKPENL True PC9_epitope_Rep5 1090.60225998074 1090.60116993586 34.69 2 0.1817033274320131 0.0006801564359802754 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 23818 20945 EYLIVFPKL True PC9_epitope_Rep4 1120.6532329244399 1120.65212993586 88.724 2 0.1816933505886311 0.0006801564359802754 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 89034 7559 REEEVTGPVIA True H1975_Epitope_Rep2 1198.61936659686 1198.61826993586 34.029 2 0.1816879892023955 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 25153 12467 FDQLLAEEK True PC9_epitope_Rep5 1091.5498900547097 1091.5487899358602 52.953 2 0.1816786509297462 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 55437 13937 LATRALPEL True PC9_epitope_Rep4 982.5811306133398 982.58002993586 61.512 2 0.18167778133767998 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 110409 18454 TIMPKDIQL True PC9_epitope_Rep3 1057.58416738845 1057.58306993586 76.187 2 0.18167585393464267 0.0006801564359802754 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'H3-5|p.R128H|1|0.5|ENSG00000188375|chr12:31791784-31791784|C/T|missense_variant', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 94360 10790 RYALQMEQL True NCI_RA007_Epitope_Rep3 1150.5804789903398 1150.57938993586 49.486 2 0.18166660693890851 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 4365 19059 AIQDKLFQV True PC9_epitope_Rep1 1060.59169529704 1060.5905899358602 78.101 2 0.1816639321000778 0.0006801564359802754 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 17277 21388 EHDDFFISL True PC9_epitope_Rep2 1121.50293986229 1121.50184993586 87.74 2 0.18166291949553381 0.0006801564359802754 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.E233D|1|0.61|ENSG00000125676|chrX:123686617-123686617|T/G|missense_variant'] 5502 17999 AMSSKFFLV True PC9_epitope_Rep6 1028.5364889200398 1028.5353899358602 81.861 2 0.18166196051346103 0.0006801564359802754 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 133238 12357 WEEEFIERC True H1975_Epitope_Rep3 1239.5230236838697 1239.52192993586 52.718 2 0.1816550502260315 0.0006801564359802754 0.9438714419765777 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 114149 7454 TRSPVKVTL True PC9_epitope_Rep2 999.60767971435 999.60658993586 34.046 2 0.181652510162815 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 98087 13041 SHYEEAMGL True PC9_epitope_Rep1 1035.43314605031 1035.43204993586 55.031 2 0.18165250435677727 0.0006801564359802754 0.9438714419765777 ['ENSG00000176953|ENST00000320805|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-3|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-2|NFATC2IP'] 6923 19740 AQLELISRL True PC9_epitope_Rep3 1041.61824439805 1041.6171499358602 81.158 2 0.18163819810585125 0.0006801564359802754 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 21616 19053 ERSPLLFTL True PC9_epitope_Rep6 1074.60734536118 1074.6062499358602 85.931 2 0.1816364437135464 0.0006801564359802754 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 5006 20291 ALLDKLYAL True PC9_epitope_Rep4 1018.6062827320198 1018.60518993586 86.192 2 0.18162755522984897 0.0006801564359802754 0.9438714419765777 ['ENSG00000177971|ENST00000403490|IMP3'] 137659 14378 YLYPDITRL True H1975_Epitope_Rep2 1152.6179100448799 1152.6168099358601 60.455 2 0.18162021406035153 0.0006801564359802754 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 93903 16481 RVIEGDVVSAL True PC9_epitope_Rep2 1156.6451874218799 1156.6440899358602 68.635 2 0.18161945961826778 0.0006801564359802754 0.9438714419765777 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 93626 6213 RTDTGEITSY True H1975_Epitope_Rep2 1141.5251318588498 1141.5240299358602 28.868 2 0.18161068323876076 0.0006801564359802754 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF', 'RERE|p.D360Gfs*12|1|0.28|ENSG00000142599|chr1:8495088-8495089|-/C|frameshift_variant'] 54428 5733 KYSSGFRNI True NCI_RA007_Epitope_Rep4 1070.55089311422 1070.5497899358602 28.669 2 0.18161042280244877 0.0006801564359802754 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant', 'ATM|p.Q1116Sfs*10|1|0.39|ENSG00000149311|chr11:108279550-108279550|T/-|frameshift_variant'] 128364 3870 VSDPSSPQYGK True NCI_RA007_Epitope_Rep4 1163.5458673034298 1163.5447699358601 21.093 2 0.1816098199064607 0.0006801564359802754 0.9438714419765777 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1'] 74057 8310 NHSNQFTQL True PC9_epitope_Rep4 1087.50467119779 1087.50356993586 39.421 2 0.1816079161580141 0.0006801564359802754 0.9438714419765777 ['ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENSG00000132024|ENST00000318003|CC2D1A'] 32122 5821 GEYRGSDFTA True NCI_RA007_Epitope_Rep3 1101.47270236317 1101.4716099358602 29.877 2 0.1816048680228808 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 84642 13877 QHEEFVTSL True PC9_epitope_Rep2 1088.51383889916 1088.51274993586 58.66 2 0.18159960579961132 0.0006801564359802754 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 76087 6879 NRMLAQQAV True PC9_epitope_Rep4 1029.53894853153 1029.53784993586 33.68 2 0.1815949026424838 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 4754 6803 ALEEAMEQK True PC9_epitope_Rep3 1047.4906609264297 1047.4895699358601 31.185 2 0.18158789582578191 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 5073 20898 ALLPHLYTL True PC9_epitope_Rep1 1039.60661708519 1039.6055299358602 85.205 2 0.18158500215953866 0.0006801564359802754 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 58674 16148 LFIATSQKF True PC9_epitope_Rep2 1053.58588164061 1053.58478993586 67.369 2 0.18158394450091167 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 23717 19174 EYIKFLRSI True PC9_epitope_Rep5 1167.6651945904698 1167.6640899358601 78.79 2 0.18157171502445096 0.0006801564359802754 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 91489 4723 RNVSTGDVNVE True NCI_RA007_Epitope_Rep3 1188.5734790335998 1188.5723899358602 25.526 2 0.1815648983289559 0.0006801564359802754 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 115096 19552 TTVDHFWGL True PC9_epitope_Rep4 1074.51344497634 1074.5123499358601 83.328 2 0.18156338325716673 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.P444Afs*17|1|0.44|ENSG00000164828|chr7:853570-853571|-/G|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 138700 15669 YRVFTTQEL True PC9_epitope_Rep2 1155.5924235730297 1155.5913299358601 65.548 2 0.18156237155248894 0.0006801564359802754 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 18718 9180 ELDHTVSMQY True H1975_Epitope_Rep2 1221.53358836757 1221.5324899358602 40.265 2 0.18155978124465155 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182541|P53671-2|LIMK2', 'ENSG00000182541|ENST00000331728|LIMK2'] 24047 5995 EYQELM[Oxidation]NVK True H1975_Epitope_Rep3 1168.5434251557197 1168.5423299358602 28.072 2 0.18155273244461242 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 134513 20260 WVDPNSPVL True PC9_epitope_Rep5 1025.51819600361 1025.51767496793 82.979 1 0.18154332245363367 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 132719 18193 VYSFGFERL True PC9_epitope_Rep6 1116.56039516876 1116.55928993586 82.62 2 0.18153596279488618 0.0006801564359802754 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 136651 6268 YIDQEELNK True NCI_RA007_Epitope_Rep2 1150.5506183307 1150.55007496793 28.987 1 0.18153379452728874 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 63995 18383 LQAPPLTSL True PC9_epitope_Rep6 938.5436824754601 938.54258993586 83.354 2 0.1815292556644563 0.0006801564359802754 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 85324 15947 QLAQFVHEV True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 66.15 2 0.1815258838281916 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'ENST00000539757.1_1_12:9440801-9462940:+|nuORF', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'ENST00000542244.5_1_12:31237807-31242486:+|nuORF', 'ENST00000535158.5_1_12:31227017-31242187:+|nuORF', 'ENST00000536265.5_1_12:31227017-31242486:+|nuORF', 'ENST00000543026.5_1_12:31240692-31242187:+|nuORF', 'ENST00000542242.1_1_12:31240692-31242486:+|nuORF'] 75774 5960 NRAPNTAEL True PC9_epitope_Rep5 984.4988575413599 984.49776993586 27.92 2 0.18152493039646675 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 104283 12103 SSEELLSLKY True H1975_Epitope_Rep1 1167.60231955039 1167.6012299358601 51.569 2 0.18151925529805918 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 114410 8658 TSDSTVYDY True H1975_Epitope_Rep3 1049.41893545481 1049.41782993586 38.299 2 0.1815163929569605 0.0006801564359802754 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 26181 15110 FHSDPQHWL True PC9_epitope_Rep5 1165.53049202281 1165.52884490379 63.126 3 0.18151566301721203 0.0006801564359802754 0.9438714419765777 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 89106 5639 REFDRRFSP True NCI_RA007_Epitope_Rep4 1208.6050539453997 1208.60341490379 28.29 3 0.18151495993943456 0.0006801564359802754 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 29600 18248 FVLDHEDGLNL True PC9_epitope_Rep6 1270.61936659686 1270.61826993586 82.831 2 0.18150983043313385 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 73785 17052 NHDFTPLEI True PC9_epitope_Rep6 1084.5189242796 1084.5178299358602 78.155 2 0.18149822116024522 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 25332 8169 FEFDTKTSA True NCI_RA007_Epitope_Rep4 1044.47639076128 1044.47528993586 38.211 2 0.18149445831173822 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 75688 16689 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53911496793 69.199 1 0.1814855100437119 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 94386 8211 RYFDPANGKF True NCI_RA007_Epitope_Rep3 1213.5880068989297 1213.5869099358601 39.433 2 0.1814810402823123 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 94431 16609 RYFKGPELL True PC9_epitope_Rep1 1121.6233297784897 1121.62222993586 68.713 2 0.1814660909609622 0.0006801564359802754 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'CSNK2A1|p.D205H|1|0.1|ENSG00000101266|chr20:492262-492262|C/G|missense_variant', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 115261 11218 TVDGVVFHY True H1975_Epitope_Rep3 1035.50254593947 1035.50197496793 48.249 1 0.18146545424341773 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'VCAN-CNTNAP3B|1|fusion'] 21072 9574 ERDMSNVSL True PC9_epitope_Rep4 1049.48115887189 1049.48006993586 44.445 2 0.18146477387693086 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 138563 19821 YRPETGSWVF True PC9_epitope_Rep3 1240.58767254576 1240.58656993586 81.474 2 0.18145848849533452 0.0006801564359802754 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 93698 15221 RTLETLIRL True PC9_epitope_Rep6 1113.6869926642098 1113.6858899358601 70.645 2 0.18145337801016378 0.0006801564359802754 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 89197 11550 REIFFPETA True H1975_Epitope_Rep2 1108.5553097883198 1108.5542099358602 49.489 2 0.18144712129596335 0.0006801564359802754 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 103843 20584 SRILVLTEL True PC9_epitope_Rep1 1042.63864548946 1042.63754993586 83.991 2 0.18143804230901187 0.0006801564359802754 0.9438714419765777 ['ENSG00000148331|ENST00000277458|ASB6', 'nc|ENSG00000148331|Q9NWX5-2|ASB6'] 77106 15293 NYAQVFNKL True PC9_epitope_Rep6 1095.57129420563 1095.57018993586 70.943 2 0.1814375169674037 0.0006801564359802754 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 140088 13459 YVPETVYRV True PC9_epitope_Rep2 1124.5866099165999 1124.58550993586 57.048 2 0.18142998985809006 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 70868 16010 [Acetylation]-M[Oxidation]EGPLSVFGDR True H1975_Epitope_Rep3 1264.57578822946 1264.57468993586 67.039 2 0.1814286611688177 0.0006801564359802754 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant', 'ENST00000544255.5_1_6:160208889-160210626:-|nuORF', 'ENST00000537390.5_3_6:160209690-160210626:-|nuORF', 'ENST00000546023.1_1_6:160210218-160210626:-|nuORF', 'ENST00000536607.1_1_6:160208906-160210500:-|nuORF', 'ENST00000543532.5_1_6:160205081-160210626:-|nuORF'] 17636 12287 EHQAVLQSL True PC9_epitope_Rep1 1023.53490869691 1023.53380993586 52.115 2 0.18142438159379976 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'nc|ENSG00000137171|Q9NSK0-2|KLC4'] 71134 19747 METVWTILP True H1975_Epitope_Rep2 1088.55761828744 1088.55652993586 81.931 2 0.18141618567609225 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 128475 9829 VSEVSSLNY True H1975_Epitope_Rep3 996.4763907612801 996.47584496793 42.835 1 0.1814072326739874 0.0006801564359802754 0.9438714419765777 ['ENSG00000117000|ENST00000372771|RLF'] 93822 9597 RVDPAKGLFY True H1975_Epitope_Rep3 1164.6291434349198 1164.6280499358602 41.928 2 0.18139776346181877 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 54594 9746 LADDSVRSL True PC9_epitope_Rep2 974.50327421546 974.50216993586 42.827 2 0.18139639834326501 0.0006801564359802754 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 108488 4561 TEEYPNKPP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 22.651 2 0.18139278979067652 0.0006801564359802754 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A'] 97917 19373 SHNPLANIL True PC9_epitope_Rep1 977.52942939365 977.52832993586 79.327 2 0.18138699779085266 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 106058 10830 SVLSPLLNK True NCI_RA007_Epitope_Rep5 969.5858816406101 969.58478993586 48.291 2 0.1813866449767728 0.0006801564359802754 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 135197 16815 YAVEGRDLTL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 69.686 2 0.18138651297531766 0.0006801564359802754 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 106428 8095 SVTSEGIKAV True PC9_epitope_Rep2 989.5393253710098 989.53822993586 36.496 2 0.18137876730895366 0.0006801564359802754 0.9438714419765777 ['AMN1|p.A111T|1|0.11|ENSG00000151743|chr12:31697943-31697943|C/T|missense_variant', 'nc|ENSG00000151743|Q8IY45-2|AMN1', 'ENSG00000151743|ENST00000281471|AMN1'] 45089 6421 IQRTPKIQVYS True H1975_Epitope_Rep2 1331.75613485319 1331.7544949037901 29.618 3 0.1813759900248101 0.0006801564359802754 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 130691 10578 VVDGAFKEV True PC9_epitope_Rep2 962.50729696674 962.50618993586 46.005 2 0.18137580485695412 0.0006801564359802754 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF', 'nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 42144 6939 IEESGEHIIA True H1975_Epitope_Rep2 1096.540053647 1096.53894993586 31.612 2 0.18137126670969606 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 21687 15399 ERYFISHVL True PC9_epitope_Rep2 1162.61349337078 1162.6118549037901 64.513 3 0.1813700129086526 0.0006801564359802754 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 107363 20370 SYSHIMALI True PC9_epitope_Rep1 1033.52665251233 1033.52554993586 83.178 2 0.18136854050895848 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 91540 18980 RPADVIFATV True PC9_epitope_Rep2 1087.60259433391 1087.6014899358602 78.372 2 0.18135716236546345 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 113937 19785 TRIWQDVQL True PC9_epitope_Rep3 1157.6193070272097 1157.61820993586 81.333 2 0.18135647460678903 0.0006801564359802754 0.9438714419765777 ['ENSG00000004766|ENST00000305866|VPS50', 'VPS50|p.S583Vfs*7|1|0.23|ENSG00000004766|chr7:93308938-93308938|A/-|frameshift_variant', 'VPS50|p.K778Nfs*7|1|0.13|ENSG00000004766|chr7:93349900-93349900|G/-|frameshift_variant', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 131853 18263 VYAVIPAEKF True PC9_epitope_Rep5 1135.62774645259 1135.62664993586 75.263 2 0.18135235612697684 0.0006801564359802754 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 27986 10966 FQTEVGKQL True PC9_epitope_Rep5 1048.5553097883198 1048.5542099358602 47.169 2 0.1813478165540394 0.0006801564359802754 0.9438714419765777 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 116712 21999 TYKNFFYLI True PC9_epitope_Rep3 1207.62774645259 1207.62664993586 89.918 2 0.18133951399555007 0.0006801564359802754 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 52651 13063 KQFEGTVEI True PC9_epitope_Rep1 1049.53932537101 1049.53822993586 55.115 2 0.18133357974600578 0.0006801564359802754 0.9438714419765777 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant', 'BRCA2|p.L1390Ffs*13|1|0.17|ENSG00000139618|chr13:32338518-32338519|-/T|frameshift_variant'] 84674 20084 QHFDAAYIF True PC9_epitope_Rep5 1110.5134449763398 1110.5123499358601 82.303 2 0.18133294673051076 0.0006801564359802754 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 1244 4573 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 22.695 2 0.1813316478316789 0.0006801564359802754 0.9438714419765777 ['ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7', 'nc|ENSG00000243414|Q86XR7-2|TICAM2'] 132745 18326 VYSKDNPNLLF True PC9_epitope_Rep5 1308.67140216972 1308.6703099358601 75.505 2 0.18132882869573216 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 109791 6275 THITAQTAV True PC9_epitope_Rep1 940.4977949122 940.49668993586 28.949 2 0.1813251795297605 0.0006801564359802754 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 49271 12686 KHGDIILVV True PC9_epitope_Rep4 992.6018660579199 992.60076993586 56.645 2 0.1813210831709035 0.0006801564359802754 0.9438714419765777 ['ENSG00000116761|ENST00000370938|CTH', 'nc|ENSG00000116761|P32929-3|CTH'] 75416 14224 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.5279899358602 62.622 2 0.18130594979118814 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 43603 17004 IIIFVPVPQLK True NCI_RA007_Epitope_Rep1 1265.81113054817 1265.81002993586 70.268 2 0.18130416519191675 0.0006801564359802754 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 40745 15658 HTVGELIEV True PC9_epitope_Rep4 995.5287606873098 995.52766993586 68.155 2 0.18130054502784074 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 94882 20024 RYPAIIYNI True PC9_epitope_Rep1 1121.62332977849 1121.62222993586 81.849 2 0.18129927654813643 0.0006801564359802754 0.9438714419765777 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000507477.1_1_17:47780142-47780651:-|nuORF', 'ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1', 'SPOP-SLC35B1|1|fusion'] 1217 12490 AEDFTIFKA True H1975_Epitope_Rep2 1040.5178616504397 1040.51676993586 53.134 2 0.181297935635918 0.0006801564359802754 0.9438714419765777 ['CFAP36|p.M284Cfs*3|1|0.11|ENSG00000163001|chr2:55544291-55544291|G/-|frameshift_variant', 'ENSG00000163001|ENST00000349456|CFAP36', 'nc|ENSG00000163001|Q96G28-2|CFAP36'] 84871 9294 QHQSGIVQL True PC9_epitope_Rep4 1008.5352430500798 1008.53414993586 43.356 2 0.18129698761377036 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 61132 7475 LLDEHHISY True H1975_Epitope_Rep2 1125.54547338061 1125.54382490379 33.7 3 0.18129381822291915 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 128196 13408 VRTPYTMSY True PC9_epitope_Rep5 1116.52738078832 1116.5262899358602 56.59 2 0.18128543626396584 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 52086 19654 KLLPQLTYL True PC9_epitope_Rep4 1087.66413196131 1087.66302993586 83.718 2 0.18128534439549152 0.0006801564359802754 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000486769.1_1_9:100760930-100767440:+|nuORF', 'nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B'] 133559 12266 WHSDDEPSL True PC9_epitope_Rep5 1084.44615326216 1084.4450499358602 52.169 2 0.18128487274613841 0.0006801564359802754 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 76050 9758 NRLENDGATAL True PC9_epitope_Rep5 1172.5785644140399 1172.57746993586 42.504 2 0.18127681713799765 0.0006801564359802754 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 112132 21654 TLVDEVFRI True PC9_epitope_Rep3 1090.60225998074 1090.60116993586 88.592 2 0.18127674308352085 0.0006801564359802754 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2', 'RPA2|p.G67W|1|0.2|ENSG00000117748|chr1:27907201-27907201|C/A|missense_variant'] 135186 18128 YAVDAYFREA True PC9_epitope_Rep3 1203.55603806431 1203.5549499358601 74.93 2 0.18127431772848077 0.0006801564359802754 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 29441 15783 FVHDLVLYL True NCI_RA007_Epitope_Rep3 1117.6171817688898 1117.6160899358601 69.718 2 0.1812722034620982 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 140557 21341 YYLNEIQSF True PC9_epitope_Rep3 1175.5498900547097 1175.5487899358602 87.385 2 0.181270950415431 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 102035 6528 SPPPPPPPP True NCI_RA007_Epitope_Rep2 881.4647038787699 881.46360993586 30.004 2 0.18126825096053387 0.0006801564359802754 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 77386 20237 NYLSIFRKF True PC9_epitope_Rep1 1186.6498788795 1186.6482449037899 82.668 3 0.1812674267601434 0.0006801564359802754 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 132240 18472 VYKTIMEQF True PC9_epitope_Rep1 1157.57908200801 1157.5779899358602 75.844 2 0.18126377681008513 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 49031 11322 KFIDTTSKF True PC9_epitope_Rep5 1085.57571087973 1085.57460993586 48.544 2 0.18125644578344763 0.0006801564359802754 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 28159 19682 FRMDIEQSL True PC9_epitope_Rep1 1137.54884450889 1137.54774993586 80.531 2 0.18125358620052395 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 136437 12047 YHGDSDLQL True PC9_epitope_Rep5 1046.4668887067398 1046.4657899358601 51.332 2 0.18124745758471306 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF'] 82994 21084 PYFNAPVYL True PC9_epitope_Rep4 1082.5436824754597 1082.5425899358602 89.261 2 0.18123527323274338 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 77243 18037 NYIKDLNIL True PC9_epitope_Rep6 1104.61791004488 1104.6168099358601 82.01 2 0.18123064400266528 0.0006801564359802754 0.9438714419765777 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 93858 6132 RVFSWSQAK True NCI_RA007_Epitope_Rep3 1107.58252759567 1107.5814299358601 31.109 2 0.18122664491049742 0.0006801564359802754 0.9438714419765777 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 120035 8055 VFEDAAEIR True H1975_Epitope_Rep3 1048.5189242795998 1048.5178299358602 35.958 2 0.18122649022946427 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 54097 13963 KYMDVQFDF True NCI_RA007_Epitope_Rep3 1191.52704643515 1191.5259499358601 62.237 2 0.18122498445220941 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 103414 19819 SQYGEIVNI True PC9_epitope_Rep3 1021.5080252427299 1021.50692993586 81.466 2 0.18121897385149596 0.0006801564359802754 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 105549 7564 SVDPTQTEY True H1975_Epitope_Rep3 1038.45056993626 1038.4494699358602 34.076 2 0.18121732429420068 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 23713 17333 EYIKFLRSI True PC9_epitope_Rep4 1167.6651945904698 1167.6640899358601 74.677 2 0.18120231703629677 0.0006801564359802754 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 83604 5580 QDVDNASLAR True PC9_epitope_Rep1 1087.52580056519 1087.52470993586 26.293 2 0.18119899671520887 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 94909 14457 RYPDRITLI True PC9_epitope_Rep2 1145.65569253593 1145.65458993586 60.878 2 0.18119408844064744 0.0006801564359802754 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 137155 21387 YLDPSVLSGV True PC9_epitope_Rep1 1048.54407639828 1048.5429699358601 87.098 2 0.18118670410611118 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 53058 18693 KSADEVLFTGV True PC9_epitope_Rep1 1164.6026539035602 1164.60154993586 76.694 2 0.18118463740880683 0.0006801564359802754 0.9438714419765777 ['ENSG00000089006|ENST00000377759|SNX5', 'ENST00000490175.5_1_20:17923003-17949420:-|nuORF'] 91595 8830 RPASYQSVSV True PC9_epitope_Rep5 1092.55637241748 1092.55526993586 38.91 2 0.18118309190965476 0.0006801564359802754 0.9438714419765777 ['ENSG00000167720|ENST00000344595|SRR'] 99610 20377 SLFPGKLEVV True PC9_epitope_Rep3 1087.62774645259 1087.62664993586 83.631 2 0.1811781255714951 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 95105 14309 RYTLQASTF True PC9_epitope_Rep5 1085.5505587610498 1085.54946993586 60.043 2 0.181152194690684 0.0006801564359802754 0.9438714419765777 ['ENSG00000055130|ENST00000325222|CUL1'] 2479 4360 AEQPSQPSSTP True H1975_Epitope_Rep2 1127.5094817947102 1127.5083899358601 21.885 2 0.18115186701352215 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 76164 5275 NRSEVQANL True PC9_epitope_Rep2 1029.52032126193 1029.51922993586 25.679 2 0.18114815497814393 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7', 'SMG7|p.V670Pfs*161|1|0.17|ENSG00000116698|chr1:183544947-183544951|TATGT/-|frameshift_variant'] 116056 6778 TVRSSTSSI True PC9_epitope_Rep3 936.48762415132 936.48652993586 31.092 2 0.1811371554835062 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 108489 4655 TEEYPNKPP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 23.003 2 0.18113152353496795 0.0006801564359802754 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A'] 139866 19840 YVDPVITSI True PC9_epitope_Rep4 1005.53826274185 1005.53716993586 84.445 2 0.1811311000889951 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 35134 6393 GRYAGEESL True PC9_epitope_Rep2 980.4563240230399 980.45522993586 29.997 2 0.18112935587669463 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 24351 11200 FADQEVRSL True PC9_epitope_Rep4 1063.52982331647 1063.5287299358602 50.858 2 0.18112913460870347 0.0006801564359802754 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 86009 14939 QPITPGPSI True PC9_epitope_Rep1 908.4967322830399 908.49562993586 62.285 2 0.18112847547050473 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 115286 13990 TVDNVQPLLY True H1975_Epitope_Rep2 1160.607739284 1160.60664993586 58.962 2 0.18112685530153028 0.0006801564359802754 0.9438714419765777 ['ENSG00000145332|ENST00000273963|KLHL8'] 17589 16598 EHLQVITTL True PC9_epitope_Rep2 1052.5866099166 1052.58550993586 69.086 2 0.1811142054882915 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 109678 7534 THEEAVTAL True PC9_epitope_Rep2 969.4767251144499 969.47562993586 34.346 2 0.1811120953403022 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 116547 14772 TYFDKNYNL True PC9_epitope_Rep4 1176.5451390274397 1176.5440499358601 64.753 2 0.181110541995812 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 20893 15523 EQSRIITVL True PC9_epitope_Rep2 1057.6131590176099 1057.61206993586 64.983 2 0.18110817323896453 0.0006801564359802754 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 21777 13162 ESDFSNPLY True H1975_Epitope_Rep2 1070.4556553167 1070.45454993586 55.752 2 0.18110777312846682 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 86973 16907 QRVPLSVQL True PC9_epitope_Rep3 1038.61857875122 1038.61748993586 70.191 2 0.18108966848151828 0.0006801564359802754 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 95060 14071 RYSEYAEEF True PC9_epitope_Rep5 1192.5036681382796 1192.50256993586 59.138 2 0.18108235278720575 0.0006801564359802754 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 22062 5420 ESSAGGSFTVR True NCI_RA007_Epitope_Rep4 1096.51490152832 1096.51380993586 27.423 2 0.1810785199747957 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000436135.1_1_1:158493653-158493989:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 96357 10889 SEFTKIITP True NCI_RA007_Epitope_Rep5 1034.5648118428599 1034.56370993586 48.524 2 0.18107805763006393 0.0006801564359802754 0.9438714419765777 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 6852 3859 AQIENSAAVQK True NCI_RA007_Epitope_Rep2 1157.6040508858898 1157.6029499358601 19.645 2 0.1810738682620089 0.0006801564359802754 0.9438714419765777 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 56204 19330 LDPHLVLDQLR True PC9_epitope_Rep2 1317.7404847890498 1317.73882490379 79.727 3 0.18107312229073202 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 64203 20638 LQIEDFEARI True PC9_epitope_Rep1 1232.6401020414398 1232.63900993586 84.205 2 0.1810727764613705 0.0006801564359802754 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 75972 10590 NRHEGVFKF True PC9_epitope_Rep5 1132.5777765684 1132.57612490379 45.723 3 0.18106943442521423 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000475698.1_1_1:201982922-201984448:+|nuORF'] 89313 8750 RELVKNWVP True H1975_Epitope_Rep3 1139.64512785223 1139.64402993586 38.661 2 0.18106920167263002 0.0006801564359802754 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 86650 17942 QRGEFVVSL True PC9_epitope_Rep1 1033.55564414149 1033.5545499358602 73.806 2 0.18106809219204503 0.0006801564359802754 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57'] 115706 22268 TVLEQVLPI True PC9_epitope_Rep5 1010.6011973515798 1010.6006749679301 90.661 1 0.18106699115556507 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 21809 7629 ESDPAYQQY True H1975_Epitope_Rep2 1099.44581890899 1099.44527496793 34.299 1 0.18106277057007997 0.0006801564359802754 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 65330 9150 LSELKPMSY True H1975_Epitope_Rep1 1066.53688284286 1066.53578993586 40.102 2 0.18105616165097452 0.0006801564359802754 0.9438714419765777 ['ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 132963 22302 VYVDDIYVI True PC9_epitope_Rep1 1097.56447748969 1097.5633899358602 90.596 2 0.18105357121497279 0.0006801564359802754 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 20669 10359 EQIEAGTPGRL True PC9_epitope_Rep1 1169.6040508858898 1169.6029499358601 44.728 2 0.18105316708971672 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 73606 21903 NGFPVFATV True PC9_epitope_Rep1 950.48616759934 950.48506993586 89.063 2 0.18104631507703053 0.0006801564359802754 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 76166 6576 NRSEVQANL True PC9_epitope_Rep5 1029.52032126193 1029.51922993586 30.265 2 0.1810312046476267 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7', 'SMG7|p.V670Pfs*161|1|0.17|ENSG00000116698|chr1:183544947-183544951|TATGT/-|frameshift_variant'] 49023 10015 KFIDTTSKF True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 43.849 2 0.18102888030250225 0.0006801564359802754 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 139255 8243 YTDATPLRV True H1975_Epitope_Rep2 1034.53965972418 1034.53856993586 36.66 2 0.18102859119601855 0.0006801564359802754 0.9438714419765777 ['ENSG00000185163|ENST00000397333|DDX51', 'ENST00000545991.1_1_12:132626393-132626546:-|nuORF', 'ENST00000546058.1_1_12:132626393-132626917:-|nuORF', 'ENST00000329073.8_1_12:132625785-132627411:-|nuORF'] 9568 19253 AYANIISQF True PC9_epitope_Rep6 1025.5181960036098 1025.5170899358602 86.706 2 0.18102195586193856 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 21073 10686 ERDMSNVSL True PC9_epitope_Rep5 1049.48115887189 1049.48006993586 46.095 2 0.18101974931462897 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 91581 14448 RPAQPTLWTA True PC9_epitope_Rep1 1139.60874234351 1139.60764993586 60.397 2 0.18101956709250852 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 72244 20236 MRYVASYLL True PC9_epitope_Rep1 1114.5845017416198 1114.5834099358601 82.665 2 0.18101393185030465 0.0006801564359802754 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 8073 8725 ATEESDLAQQY True H1975_Epitope_Rep1 1253.54117584581 1253.54067496793 38.488 1 0.18101165638866457 0.0006801564359802754 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 123134 8186 VHDPAGALQAA True PC9_epitope_Rep4 1048.5301576696397 1048.5290699358602 38.947 2 0.1809942689078903 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 15058 7961 EAALSTALSEK True NCI_RA007_Epitope_Rep2 1118.58191845898 1118.58082993586 35.598 2 0.18099423477490278 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 89101 4826 REFDNPDTA True NCI_RA007_Epitope_Rep4 1063.45705229903 1063.4559499358602 24.998 2 0.18098763302130164 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136161|O95199-2|RCBTB2', 'ENSG00000136161|ENST00000344532|RCBTB2'] 84054 9083 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57746993586 39.842 2 0.1809870786720341 0.0006801564359802754 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 67302 11652 LTDPIQGTEY True H1975_Epitope_Rep2 1135.53971929383 1135.53917496793 49.889 1 0.18098229882855646 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 77015 19021 NVVDVFHAV True PC9_epitope_Rep2 998.51853035678 998.51742993586 78.529 2 0.18098168182865956 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 15568 7322 EATDVIIIHSK True NCI_RA007_Epitope_Rep1 1224.67140216972 1224.66976490379 32.473 3 0.1809782818685446 0.0006801564359802754 0.9438714419765777 ['ENSG00000166825|ENST00000300060|ANPEP'] 86684 15160 QRIDEFEAL True PC9_epitope_Rep6 1119.5560380643099 1119.5549499358601 70.389 2 0.18097408579865443 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 31161 17022 GDEELDSLIK True PC9_epitope_Rep3 1117.5502839775297 1117.54918993586 70.63 2 0.18096702838314652 0.0006801564359802754 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 29025 17373 FTLDHVQEI True PC9_epitope_Rep2 1100.55022440788 1100.54912993586 72.083 2 0.1809619347086557 0.0006801564359802754 0.9438714419765777 ['ENST00000371317.9_1_X:119737922-119739264:+|nuORF'] 91297 19541 RLYPEGLAQL True PC9_epitope_Rep3 1158.6397081186199 1158.6386099358601 80.397 2 0.18095995412627758 0.0006801564359802754 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 46881 21937 IVHSVFEFL True PC9_epitope_Rep5 1089.58588164061 1089.58478993586 89.422 2 0.18095811152447364 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 112311 17262 TMDVDLFSQY True H1975_Epitope_Rep2 1217.52744035797 1217.52634993586 71.69 2 0.18095723750157078 0.0006801564359802754 0.9438714419765777 ['ENSG00000005100|ENST00000225296|DHX33', 'nc|ENSG00000005100|Q9H6R0-2|DHX33', 'ENST00000575153.5_1_17:5347527-5364435:-|nuORF'] 65073 9908 LSDLGRLSY True H1975_Epitope_Rep1 1022.53965972418 1022.53856993586 43.047 2 0.18095500427761832 0.0006801564359802754 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 94448 19236 RYFLPPYTF True PC9_epitope_Rep6 1202.6124307416196 1202.61132993586 86.642 2 0.1809542958972337 0.0006801564359802754 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 116963 16605 TYPKIWVKV True PC9_epitope_Rep3 1132.66446631448 1132.66282490379 69.008 3 0.18094994878036405 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 77415 20605 NYMPGQLTI True PC9_epitope_Rep1 1035.5059170677498 1035.50480993586 84.074 2 0.18094603828316433 0.0006801564359802754 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 71995 13235 MQDKSSYLL True PC9_epitope_Rep1 1083.52704643515 1083.5259499358601 55.774 2 0.18094116032097998 0.0006801564359802754 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 77189 10885 NYGHVYAVF True NCI_RA007_Epitope_Rep3 1068.5028802926397 1068.5017899358602 49.889 2 0.1809375251693448 0.0006801564359802754 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 9547 16937 AYAIIKEEL True PC9_epitope_Rep3 1048.580461907 1048.57936993586 70.304 2 0.18093729265577235 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 114886 5469 TTEERTQLY True H1975_Epitope_Rep3 1139.54586730343 1139.5447699358601 26.09 2 0.1809295331678955 0.0006801564359802754 0.9438714419765777 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13', 'ENST00000471302.2_1_1:231047214-231057243:-|nuORF'] 104782 12621 STDPLDAGVDY True H1975_Epitope_Rep2 1151.4982484046698 1151.49767496793 53.644 1 0.18092318337372948 0.0006801564359802754 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 70512 17668 LYTEKFEEF True PC9_epitope_Rep2 1204.5652057656796 1204.5641099358602 73.24 2 0.1809000355515602 0.0006801564359802754 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 23704 19279 EYIKFLRSI True PC9_epitope_Rep1 1167.6651945904698 1167.66355490379 78.959 3 0.1808977427659638 0.0006801564359802754 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 45009 20811 IQLPSEKAIFL True PC9_epitope_Rep3 1257.7332741502898 1257.7321699358602 85.321 2 0.18089537169965503 0.0006801564359802754 0.9438714419765777 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 49018 11205 KFIDTTSKF True PC9_epitope_Rep1 1085.57571087973 1085.57460993586 47.981 2 0.18088090721241668 0.0006801564359802754 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 25464 5331 FENERAVTP True H1975_Epitope_Rep2 1061.51417325233 1061.5130699358601 25.558 2 0.18087365970149671 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1'] 10078 6546 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep4 1119.5171508382302 1119.51604993586 31.791 2 0.1808729080337594 0.0006801564359802754 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 113515 11315 TQTAVITRI True PC9_epitope_Rep3 1001.5869442697699 1001.58584993586 48.529 2 0.1808713117593576 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 137994 19989 YQAPDIDVQL True PC9_epitope_Rep4 1160.57135377528 1160.5702499358601 85.021 2 0.18086197312366115 0.0006801564359802754 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 40153 5547 HRDYETATL True PC9_epitope_Rep4 1104.51998690876 1104.5188899358602 28.103 2 0.18086082765888303 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 21576 5748 ERSGVNSEL True PC9_epitope_Rep1 989.47778774361 989.47668993586 26.927 2 0.18085956087322233 0.0006801564359802754 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 132180 16836 VYISNGQVL True PC9_epitope_Rep2 991.5338460677498 991.53274993586 70.008 2 0.18085777028146133 0.0006801564359802754 0.9438714419765777 ['ENST00000487571.1_1_3:53922418-53925815:-|nuORF', 'ENSG00000113811|ENST00000495461|SELENOK'] 6925 17545 AQLELISRL True PC9_epitope_Rep6 1041.61824439805 1041.6171499358602 80.127 2 0.1808521541264622 0.0006801564359802754 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 72104 15192 MRDPIRILV True PC9_epitope_Rep6 1111.65358436095 1111.65248993586 70.518 2 0.18084094837944956 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 128362 4152 VSDPSSPQYGK True NCI_RA007_Epitope_Rep2 1163.5458673034298 1163.5447699358601 20.789 2 0.1808370688515979 0.0006801564359802754 0.9438714419765777 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1'] 8248 6083 ATILAGDVKVK True NCI_RA007_Epitope_Rep3 1113.6757592741699 1113.67466993586 30.91 2 0.18082740122532281 0.0006801564359802754 0.9438714419765777 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2'] 9776 17811 AYLEAYKEF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 73.529 2 0.18082204454606898 0.0006801564359802754 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 44139 19192 ILPKELQTW True PC9_epitope_Rep3 1126.6386454894598 1126.63754993586 79.039 2 0.1808216207074948 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 72674 20116 MYGDYKYTYW True PC9_epitope_Rep5 1388.5747249035599 1388.57362993586 82.423 2 0.18081944697235067 0.0006801564359802754 0.9438714419765777 ['ENSG00000155380|ENST00000369626|SLC16A1'] 114825 17480 TTDFIYQLY True H1975_Epitope_Rep2 1162.55464108198 1162.55354993586 72.526 2 0.1808180332704117 0.0006801564359802754 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 89056 8594 REEGPYEVEV True H1975_Epitope_Rep1 1205.55643198713 1205.55532993586 37.985 2 0.18081559973875497 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 34462 14250 GQDEPLIHV True PC9_epitope_Rep3 1006.5083595958998 1006.50726993586 59.899 2 0.18081373322538913 0.0006801564359802754 0.9438714419765777 ['ENSG00000157778|ENST00000288607|PSMG3'] 10014 15132 AYTLLLHTW True NCI_RA007_Epitope_Rep5 1116.59678067748 1116.59568993586 64.872 2 0.18080997856171768 0.0006801564359802754 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 127523 3485 VQVEYKGETK True NCI_RA007_Epitope_Rep5 1179.6135529404298 1179.61189490379 19.212 3 0.18079811991319322 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA2|p.D209Rfs*26|1|0.14|ENSG00000126803|chr14:64541469-64541470|-/T|frameshift_variant', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 9405 6226 AVVIVDDR True NCI_RA007_Epitope_Rep4 885.4919812557699 885.49088993586 30.555 2 0.18079278258116308 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 97033 15318 SEWDGIVTV True NCI_RA007_Epitope_Rep4 1004.4814761417199 1004.48036993586 66.575 2 0.18079177586177253 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 9445 6823 AVVTQVNKV True PC9_epitope_Rep5 956.5654805492 956.56438993586 31.217 2 0.18079123977571526 0.0006801564359802754 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 43738 7884 IITEGFEAAK True H1975_Epitope_Rep1 1077.57062549929 1077.5695299358601 35.278 2 0.18078943674984202 0.0006801564359802754 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 53827 13905 KYGALVNNF True PC9_epitope_Rep2 1024.53418042092 1024.53308993586 58.765 2 0.18078114921323502 0.0006801564359802754 0.9438714419765777 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 26154 19517 FHNELLTQL True PC9_epitope_Rep5 1113.5818588893299 1113.5812749679299 80.125 1 0.18077645978854637 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 26503 20163 FISPFGHGL True PC9_epitope_Rep1 973.5021520166499 973.50104993586 82.386 2 0.1807757200779985 0.0006801564359802754 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000577440.5_1_17:56598198-56609324:-|nuORF', 'ENST00000584488.5_1_17:56598198-56606616:-|nuORF', 'ENSG00000184702|ENST00000455784|SEPTIN5', 'nc|ENSG00000284874|Q99719-2|SEPTIN5'] 139837 5937 YVDGVEVHNA True NCI_RA007_Epitope_Rep5 1101.50908787189 1101.50798993586 29.522 2 0.18077374924589765 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 114344 6677 TSDDVKEQIY True H1975_Epitope_Rep3 1196.55609763396 1196.55557496793 30.638 1 0.18076172335363958 0.0006801564359802754 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 36040 8420 GVDSSIFQNPK True NCI_RA007_Epitope_Rep3 1190.59315184902 1190.5920499358601 40.209 2 0.18075681395092974 0.0006801564359802754 0.9438714419765777 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 40924 5007 HVVFIAQR True NCI_RA007_Epitope_Rep5 968.55558457184 968.55448993586 25.964 2 0.18075672003686785 0.0006801564359802754 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 133033 15140 VYVQNVVKL True PC9_epitope_Rep4 1060.6280808057597 1060.6269899358601 66.163 2 0.1807497563929636 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 14642 9159 DVNAAIATIK True H1975_Epitope_Rep3 1014.57095985246 1014.56986993586 40.221 2 0.18074677729547056 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 75365 12843 NQDDSILKV True PC9_epitope_Rep2 1030.5294889632999 1030.52897496793 54.701 1 0.18074382965298366 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 81238 6176 PPPAPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 31.299 2 0.18074369726947115 0.0006801564359802754 0.9438714419765777 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'BOD1L1|p.V1300*|1|0.17|ENSG00000038219|chr4:13603002-13603002|C/-|frameshift_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'ENST00000480400.1_1_2:175446032-175450310:-|nuORF', 'nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'nc|ENSG00000162105|Q9UPX8-1|SHANK2', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000038219|ENST00000040738|BOD1L1', 'ENSG00000162105|ENST00000601538|SHANK2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENSG00000271601|ENST00000604000|LIX1L'] 3197 7194 AGELTEDEVER True PC9_epitope_Rep4 1246.5677249468197 1246.5666299358602 34.975 2 0.18074254518369265 0.0006801564359802754 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 70123 16068 LYKDVRDLL True PC9_epitope_Rep4 1133.6444591458899 1133.6433699358602 69.739 2 0.18074033957700203 0.0006801564359802754 0.9438714419765777 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1', 'ANKZF1|p.T270S|1|0.12|ENSG00000163516|chr2:219233422-219233422|A/T|missense_variant'] 67124 11295 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.58167496793 48.493 1 0.18073532714224044 0.0006801564359802754 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 109710 20721 THFLQPIYL True PC9_epitope_Rep5 1130.6124307416198 1130.61132993586 84.761 2 0.1807334248089884 0.0006801564359802754 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 13200 18087 DLTEYLSR True PC9_epitope_Rep1 995.49237517859 995.49126993586 74.366 2 0.1807247525199575 0.0006801564359802754 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 126706 6799 VPRPPDTVST True PC9_epitope_Rep6 1067.56112344475 1067.56002993586 34.986 2 0.1807172733158333 0.0006801564359802754 0.9438714419765777 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 139363 9369 YTDTYTEAY True H1975_Epitope_Rep2 1125.4502355830898 1125.4491299358601 40.999 2 0.1807156172162216 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 40687 6231 HTLNQIDSVK True PC9_epitope_Rep5 1153.6091362663299 1153.60802993586 28.946 2 0.18070961679040615 0.0006801564359802754 0.9438714419765777 ['CON__P12763'] 6995 6471 AQQLAEVEVK True H1975_Epitope_Rep3 1113.6029882567298 1113.60188993586 29.863 2 0.18070840311515995 0.0006801564359802754 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 69869 16746 LYAPYSTHF True PC9_epitope_Rep1 1097.51819600361 1097.5170899358602 69.242 2 0.18069961571205057 0.0006801564359802754 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 110686 19421 TIYKDFVYI True PC9_epitope_Rep4 1160.6117620352798 1160.6106699358602 82.815 2 0.18069703465825174 0.0006801564359802754 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 83027 11019 PYKVTQDEL True PC9_epitope_Rep5 1091.54989005471 1091.5487899358602 47.373 2 0.180693183336191 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 137117 7631 YLDDPTVPR True H1975_Epitope_Rep3 1074.53457434374 1074.53346993586 34.335 2 0.18069306241877683 0.0006801564359802754 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153761151-153761283:-|nuORF'] 7484 15354 ASDYFDQLY True H1975_Epitope_Rep3 1120.47130538084 1120.4707749679299 64.469 1 0.18069294748241638 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 89339 6927 REM[Oxidation]EENFAV True H1975_Epitope_Rep2 1139.49172393603 1139.4906299358602 31.566 2 0.18068838708800888 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 29318 21558 FVDPVLNQL True PC9_epitope_Rep1 1043.56514619603 1043.56404993586 87.744 2 0.18068728371629306 0.0006801564359802754 0.9438714419765777 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C'] 129444 10402 VTELHVISY True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 44.96 2 0.18068612890183874 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 105803 16488 SVINEINKI True PC9_epitope_Rep3 1028.5866099165999 1028.58550993586 68.557 2 0.1806832375075757 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 133557 12393 WHSDDEPSL True PC9_epitope_Rep3 1084.44615326216 1084.4450499358602 52.699 2 0.18067998788796047 0.0006801564359802754 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 90951 8317 RLFVGSIPK True NCI_RA007_Epitope_Rep4 1015.6178504752298 1015.61674993586 38.806 2 0.18067654337547676 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 94641 16704 RYLDLFTSF True NCI_RA007_Epitope_Rep3 1160.5866099165999 1160.58550993586 73.521 2 0.18067576446004166 0.0006801564359802754 0.9438714419765777 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 30828 9084 GAPTFNVTVTK True NCI_RA007_Epitope_Rep2 1133.6080736371698 1133.6069699358602 39.94 2 0.18067531784312305 0.0006801564359802754 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 88879 5770 REAFEAIKAA True NCI_RA007_Epitope_Rep3 1104.5927579261997 1104.5916699358602 29.678 2 0.18067328562973872 0.0006801564359802754 0.9438714419765777 ['ENSG00000173141|ENST00000309594|MRPL57'] 439 13778 AALQELLSK True PC9_epitope_Rep6 971.5651461960299 971.56404993586 64.798 2 0.1806699676206242 0.0006801564359802754 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 54127 11987 KYNANFVTF True NCI_RA007_Epitope_Rep1 1102.54474510462 1102.54364993586 50.613 2 0.18063422812103405 0.0006801564359802754 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 47313 9562 IYGEKTYAF True NCI_RA007_Epitope_Rep3 1090.5335117145798 1090.5324099358602 44.697 2 0.18063285266625928 0.0006801564359802754 0.9438714419765777 ['ENSG00000242550|ENST00000238508|SERPINB10'] 136670 9868 YIDSKFEDY True H1975_Epitope_Rep2 1178.5131701928199 1178.5120699358602 42.944 2 0.18062946618151704 0.0006801564359802754 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF', 'ENST00000428867.1_1_7:45797631-45798728:-|nuORF', 'ENST00000429741.5_1_7:45796578-45798731:-|nuORF', 'ENST00000449219.2_1_1:224190265-224197055:+|nuORF', 'ENST00000489259.5_1_10:38674311-38691690:-|nuORF'] 116694 13217 TYITSVSRL True PC9_epitope_Rep4 1038.57095985246 1038.5698699358602 58.736 2 0.1806289674716517 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 5437 7376 ALYDATYETK True H1975_Epitope_Rep1 1173.5553693579702 1173.55426993586 33.376 2 0.18062421413597465 0.0006801564359802754 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 108699 4827 TEMDAKTVTA True H1975_Epitope_Rep3 1065.50122561013 1065.50012993586 23.692 2 0.18061436177127224 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion', 'ENST00000463171.5_1_3:189681716-189688667:-|nuORF'] 114234 21991 TRWPGFYIL True PC9_epitope_Rep3 1151.6127650947897 1151.6116699358602 89.888 2 0.18061246939498168 0.0006801564359802754 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF', 'ENST00000588721.1_1_17:75208810-75210102:+|nuORF'] 22339 4782 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56219490379 23.482 3 0.18061161955727276 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 77352 18388 NYLHLDYNF True PC9_epitope_Rep6 1197.5454733806098 1197.54436993586 83.373 2 0.1806115831704032 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 68742 16545 LVDLAPLGY True H1975_Epitope_Rep2 959.5327834385898 959.53168993586 68.865 2 0.18060909878823667 0.0006801564359802754 0.9438714419765777 ['DTX2|p.H232Tfs*122|1|0.12|ENSG00000091073|chr7:76482925-76482926|-/C|frameshift_variant', 'nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 113826 9727 TREDAGSYTL True PC9_epitope_Rep5 1111.51456717515 1111.51346993586 42.383 2 0.18060530533760977 0.0006801564359802754 0.9438714419765777 ['ENSG00000204941|ENST00000342951|PSG5', 'ENST00000401992.1_1_19:43687564-43690557:-|nuORF', 'ENST00000600817.5_1_19:43679971-43690557:-|nuORF', 'nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11', 'ENST00000599245.1_1_19:43528837-43530575:-|nuORF', 'ENSG00000242221|ENST00000406487|PSG2', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 103652 13307 SRDMTMFVT True PC9_epitope_Rep6 1086.48380172418 1086.4827099358602 62.84 2 0.18060389344786273 0.0006801564359802754 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 83948 9687 QELDGELEA True H1975_Epitope_Rep2 1002.4505699362599 1002.4499749679301 42.242 1 0.18059711489579797 0.0006801564359802754 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 37592 8749 GYSFTTTAER True PC9_epitope_Rep1 1131.51965255559 1131.5185499358602 38.491 2 0.1805882159793449 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 23829 19238 EYLLKVNEI True PC9_epitope_Rep3 1119.61757569171 1119.61646993586 79.219 2 0.18058689028766636 0.0006801564359802754 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 28836 5169 FTDKSAEDY True H1975_Epitope_Rep3 1074.4505699362599 1074.4494699358602 24.983 2 0.18058224228434303 0.0006801564359802754 0.9438714419765777 ['ENST00000533568.5_1_11:77069900-77103583:-|nuORF', 'ENSG00000149269|ENST00000356341|PAK1', 'nc|ENSG00000149269|Q13153-2|PAK1'] 128466 6324 VSESSDVLPK True NCI_RA007_Epitope_Rep2 1059.54480467427 1059.54370993586 29.206 2 0.18057463906298227 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 6318 6630 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 30.525 2 0.18057449165568387 0.0006801564359802754 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 94495 10058 RYIANTVEL True NCI_RA007_Epitope_Rep2 1077.58185888933 1077.5807699358602 43.721 2 0.1805724123836626 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 46202 6105 ITDKNSLAY True H1975_Epitope_Rep3 1023.52367530687 1023.5225699358599 28.496 2 0.18057022049136381 0.0006801564359802754 0.9438714419765777 ['ENSG00000163510|ENST00000410053|CWC22'] 23972 19261 EYPDRIMNTF True PC9_epitope_Rep1 1284.5808729131597 1284.5797699358602 78.89 2 0.18057012326546268 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 38482 14366 HHALPITDL True PC9_epitope_Rep5 1015.54507945779 1015.5439899358599 60.259 2 0.18056368829826094 0.0006801564359802754 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 115820 14231 TVMDSKIVQV True PC9_epitope_Rep2 1118.60054572858 1118.59944993586 60.006 2 0.18056083589806096 0.0006801564359802754 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 35599 4556 GTLASVYHK True NCI_RA007_Epitope_Rep4 974.5185303567802 974.51742993586 23.928 2 0.18055456124696392 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 7157 8961 ARADSYYEY True PC9_epitope_Rep4 1136.47745339044 1136.47634993586 42.015 2 0.18055081686256635 0.0006801564359802754 0.9438714419765777 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000480100.3_1_9:140000303-140000768:+|nuORF', 'ENST00000535028.5_1_9:140000303-140001810:+|nuORF'] 64513 11288 LRAPASSCESL True PC9_epitope_Rep5 1132.55465816532 1132.5535699358602 48.412 2 0.18054893371890982 0.0006801564359802754 0.9438714419765777 ['ENST00000336273.7_1_8:98656420-98656720:+|nuORF'] 125400 9673 VLTEIIASR True NCI_RA007_Epitope_Rep1 1000.5916952970399 1000.59058993586 41.625 2 0.18054789741706326 0.0006801564359802754 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 110971 8461 TLDDESLKY True H1975_Epitope_Rep1 1082.5131701928199 1082.5120699358602 37.474 2 0.180540570965141 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 138026 19313 YQDEVFGGF True PC9_epitope_Rep6 1060.4501760134397 1060.44967496793 86.936 1 0.18054024099491384 0.0006801564359802754 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 19989 6804 EM[Oxidation]FEDTVEER True H1975_Epitope_Rep1 1299.5288972903898 1299.52778993586 31.214 2 0.18053935819857117 0.0006801564359802754 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7'] 17426 13580 EHFPQAYSV True PC9_epitope_Rep1 1076.49270953176 1076.4916099358602 57.091 2 0.18053741497416606 0.0006801564359802754 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 71735 6106 MMDPNSTQRY True H1975_Epitope_Rep3 1241.51689275761 1241.51578993586 28.499 2 0.180527863928226 0.0006801564359802754 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 8312 19282 ATLNDGVVVQV True PC9_epitope_Rep1 1113.60298825673 1113.60188993586 78.97 2 0.18052081760173855 0.0006801564359802754 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000413279.1_1_2:136269117-136269381:-|nuORF'] 9675 21603 AYGSLFNTI True PC9_epitope_Rep1 984.4916469026 984.49054993586 87.919 2 0.18052045302408104 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 99435 9998 SLEIDLDSM[Oxidation]R True H1975_Epitope_Rep3 1193.55980349585 1193.5587099358602 43.493 2 0.18051711278189672 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000534205.1_1_11:35881882-35882566:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'CON__H-INV:HIT000015463', 'ENST00000452408.1_1_6:28937132-28937360:-|nuORF'] 108351 5259 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 25.297 2 0.18051692130535735 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 139124 12041 YSQDYQQFY True H1975_Epitope_Rep2 1240.5036681382799 1240.50256993586 51.395 2 0.18051581158885308 0.0006801564359802754 0.9438714419765777 ['ENSG00000003756|ENST00000347869|RBM5', 'ENST00000441812.6_1_3:50144918-50150831:+|nuORF', 'ENST00000494360.5_1_3:50144211-50147205:+|nuORF', 'ENST00000489437.1_1_3:50144918-50148299:+|nuORF'] 104241 9409 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4603699358602 41.159 2 0.180505443236172 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 15443 5842 EANM[Oxidation]PLPGYK True H1975_Epitope_Rep3 1134.5379458524596 1134.5368499358601 27.486 2 0.18049813522244257 0.0006801564359802754 0.9438714419765777 ['ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3'] 104802 8224 STDPSVLGKY True H1975_Epitope_Rep3 1065.5342399905699 1065.53367496793 36.616 1 0.18049169216044683 0.0006801564359802754 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 9756 18542 AYLEAIHNF True PC9_epitope_Rep1 1076.52909504048 1076.5279899358602 76.112 2 0.18048176474432429 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 107718 17531 TALLKIEGV True PC9_epitope_Rep5 942.57498260374 942.5744349679301 72.438 1 0.18047363376079778 0.0006801564359802754 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 75357 6622 NQDDLTHKL True PC9_epitope_Rep5 1082.5356369729002 1082.53452993586 30.445 2 0.1804716906530578 0.0006801564359802754 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 17241 19029 EHALLAYTL True PC9_epitope_Rep2 1029.5494961318898 1029.54838993586 78.56 2 0.18046753749183603 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 139850 21656 YVDPLDPSF True PC9_epitope_Rep5 1051.48622716899 1051.4851299358602 88.346 2 0.1804518690786001 0.0006801564359802754 0.9438714419765777 ['ENST00000472446.1_1_17:17412858-17494940:-|nuORF', 'nc|ENSG00000133027|Q9UBM1|PEMT', 'nc|ENSG00000133027|Q9UBM1-3|PEMT', 'ENSG00000133027|ENST00000255389|PEMT'] 54042 12328 KYLSVQGQLF True NCI_RA007_Epitope_Rep5 1181.64445914589 1181.6433699358602 54.07 2 0.18044365282223815 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 88795 9065 RDQIVTVSV True H1975_Epitope_Rep2 1015.56620882519 1015.56510993586 39.822 2 0.18043205665949066 0.0006801564359802754 0.9438714419765777 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG840|P61565|ERVK-21_env'] 54700 6682 LAEFATGNDR True NCI_RA007_Epitope_Rep2 1092.5199869087598 1092.5188899358602 30.602 2 0.18042977221377107 0.0006801564359802754 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000453697.1_1_7:63894611-63894797:+|nuORF'] 95449 21233 SALPDIKVLTL True PC9_epitope_Rep5 1168.7067250492798 1168.70562993586 86.723 2 0.18041839413885863 0.0006801564359802754 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 57930 8339 LEQLTGQTP True H1975_Epitope_Rep2 985.50802524273 985.50692993586 37.028 2 0.18041463584478465 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 70350 22493 LYPSIIQEF True PC9_epitope_Rep1 1108.580461907 1108.57936993586 91.319 2 0.18040808509188955 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 89380 9177 REMEENFAVEA True H1975_Epitope_Rep3 1323.57651580871 1323.57540993586 40.289 2 0.18040720509038818 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 76811 16643 NVELDPEIQ True PC9_epitope_Rep3 1055.51350454599 1055.5124099358602 69.154 2 0.18040316818256485 0.0006801564359802754 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 59886 7825 LHHDDPEVL True PC9_epitope_Rep5 1073.51417325233 1073.5130699358601 35.043 2 0.18040250718430037 0.0006801564359802754 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 132147 9108 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 40.375 3 0.18040227496980102 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 41926 6103 IEANEALVK True H1975_Epitope_Rep3 985.5444107514498 985.54330993586 28.488 2 0.1803931560527144 0.0006801564359802754 0.9438714419765777 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF'] 105576 5932 SVEAAAELSAK True H1975_Epitope_Rep1 1074.55570371114 1074.55460993586 27.888 2 0.18039291941489907 0.0006801564359802754 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 129298 10655 VTDSGPTFNY True H1975_Epitope_Rep1 1099.4822044177101 1099.48110993586 45.941 2 0.1803875105530283 0.0006801564359802754 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 86787 13925 QRNEVVVEL True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 58.398 2 0.18038630478867815 0.0006801564359802754 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 52614 7532 KQDGTIQNL True PC9_epitope_Rep1 1015.52982331647 1015.52872993586 33.789 2 0.18038479609871075 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'PDE4DIP|p.R930Sfs*80|1|0.35|ENSG00000178104|chr1:148981371-148981371|G/-|frameshift_variant', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 113204 8812 TQDPTVTRL True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 38.84 2 0.1803839913240514 0.0006801564359802754 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 114848 11946 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.49807496793 51.106 1 0.18038284300420002 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 134909 7251 YADPVNAHY True H1975_Epitope_Rep2 1048.46140940348 1048.46030993586 32.825 2 0.18037999986461853 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 98071 16428 SHVIQDIAL True PC9_epitope_Rep1 994.5447451046199 994.54364993586 68.013 2 0.18037611805053078 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10'] 12341 13321 DIVMTQSPDSL True NCI_RA007_Epitope_Rep5 1204.56455414268 1204.56344993586 57.921 2 0.1803706858881515 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000211598|P06312|IGKV4-1'] 109709 19580 THFLQPIYL True PC9_epitope_Rep4 1130.6124307416198 1130.61132993586 83.437 2 0.1803640196723764 0.0006801564359802754 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 103376 17883 SQVPHLPVLV True PC9_epitope_Rep6 1087.6389798426299 1087.6378899358601 81.413 2 0.18035686313564708 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 27117 20319 FLQPELVKL True PC9_epitope_Rep1 1085.6484818971699 1085.64738993586 82.986 2 0.18035545154485236 0.0006801564359802754 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4'] 35138 7650 GRYAGEESL True PC9_epitope_Rep5 980.4563240230399 980.45522993586 34.371 2 0.1803482561295293 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 11495 21005 DGFLSELTQQL True H1975_Epitope_Rep1 1249.6190322436898 1249.61792993586 87.241 2 0.18034324756186326 0.0006801564359802754 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 52807 11683 KQTDVLQQL True PC9_epitope_Rep6 1071.59242357303 1071.5913299358601 56.07 2 0.18034193221982353 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 40452 9015 HSDPMFSSY True H1975_Epitope_Rep2 1069.41749598617 1069.41638993586 39.627 2 0.18033558971120608 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'NSD3|p.Y887C|1|0.83|ENSG00000147548|chr8:38299542-38299542|T/C|missense_variant'] 31227 16439 GDLGIEIPAEK True PC9_epitope_Rep3 1140.60265390356 1140.60154993586 68.37 2 0.18033364902465643 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 95703 12061 SAYEFYHAL True NCI_RA007_Epitope_Rep5 1099.49746055903 1099.49636993586 53.05 2 0.1803330996204915 0.0006801564359802754 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 4072 18962 AHSDTLFTI True PC9_epitope_Rep3 1003.4974605590301 1003.49636993586 78.162 2 0.18032833188939143 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 18061 18946 EIITIIHQV True PC9_epitope_Rep3 1064.6229954253201 1064.62188993586 78.101 2 0.18032130914558336 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 24411 13649 FAFQAEVNR True PC9_epitope_Rep5 1080.53524305008 1080.5341499358601 57.525 2 0.18031767884442448 0.0006801564359802754 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000559111.1_1_15:99797871-99798159:+|nuORF'] 137164 4711 YLDQEKEDGKY True H1975_Epitope_Rep3 1386.63032520338 1386.62866490379 23.247 3 0.1803042181153522 0.0006801564359802754 0.9438714419765777 ['ENSG00000158411|ENST00000289359|MITD1'] 21405 21568 ERNDLIVFL True PC9_epitope_Rep3 1117.6131590176099 1117.61206993586 88.256 2 0.18029352074858476 0.0006801564359802754 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1'] 90312 18409 RIADSFQVI True PC9_epitope_Rep5 1047.57129420563 1047.57018993586 75.831 2 0.18028666904402962 0.0006801564359802754 0.9438714419765777 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 84721 20034 QHFNGLLEI True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 82.31 2 0.18028207302998156 0.0006801564359802754 0.9438714419765777 ['TNPO3|p.V807*|1|0.18|ENSG00000064419|chr7:128972437-128972437|C/-|frameshift_variant', 'nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3'] 6351 4871 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 26.264 2 0.1802772800626358 0.0006801564359802754 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 72277 14295 MSDSYLPSYY True H1975_Epitope_Rep3 1224.5008912569601 1224.49978993586 60.329 2 0.18027305382666692 0.0006801564359802754 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 47560 23174 IYMDTLNIF True PC9_epitope_Rep3 1128.5525329069999 1128.5514299358601 94.409 2 0.1802703710023258 0.0006801564359802754 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 99978 18691 SLIRNLEQL True PC9_epitope_Rep4 1084.62405805448 1084.62296993586 79.975 2 0.18025958294916986 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 43474 20946 IHVDFPVIL True PC9_epitope_Rep4 1051.60661708519 1051.6055299358602 88.728 2 0.1802561039546322 0.0006801564359802754 0.9438714419765777 ['ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 7221 9140 ARDPQRYLV True PC9_epitope_Rep5 1116.6039913162401 1116.60288993586 40.102 2 0.18024929646767893 0.0006801564359802754 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR', 'ENST00000485503.1_1_7:55266411-55268235:+|nuORF', 'nc|ENSG00000178568|Q15303-4|ERBB4', 'nc|ENSG00000178568|Q15303-3|ERBB4', 'nc|ENSG00000178568|Q15303-2|ERBB4', 'ENSG00000178568|ENST00000342788|ERBB4'] 9840 20339 AYLLNLNHL True PC9_epitope_Rep5 1069.59202965021 1069.59092993586 83.269 2 0.1802486876599957 0.0006801564359802754 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 49006 20560 KFIDPIYQVW True PC9_epitope_Rep4 1307.69140933831 1307.6903099358601 87.235 2 0.18024447103787988 0.0006801564359802754 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 39355 8346 HLVDEPQNLIK True H1975_Epitope_Rep1 1304.7088503076 1304.7077499358602 37.034 2 0.1802427890967801 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 75645 21308 NQSELAVLL True PC9_epitope_Rep2 985.5444107514498 985.54330993586 87.425 2 0.18024211972131587 0.0006801564359802754 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 94507 12056 RYIANTVEL True PC9_epitope_Rep6 1077.58185888933 1077.5807699358602 57.685 2 0.18023778003751348 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 26032 20604 FHDHALMIIF True PC9_epitope_Rep2 1242.6219498795 1242.62029490379 84.687 3 0.18023432207880405 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 124298 18313 VLDILLEQY True H1975_Epitope_Rep2 1104.60667665484 1104.60556993586 75.941 2 0.18023360740946107 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 72175 14502 MRMLAEDEL True PC9_epitope_Rep6 1106.51001647202 1106.5089099358602 67.664 2 0.18020653767251177 0.0006801564359802754 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 48543 8211 KEGEFTLSA True H1975_Epitope_Rep2 980.4814761417199 980.48036993586 36.536 2 0.1802033623313403 0.0006801564359802754 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 119126 6866 VEILANDQGNR True PC9_epitope_Rep2 1227.6207635791898 1227.6196699358602 31.812 2 0.18020111219738286 0.0006801564359802754 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 90351 14223 RIIDVVYNA True PC9_epitope_Rep6 1061.58694426977 1061.58584993586 66.596 2 0.18019437930525667 0.0006801564359802754 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 115475 18851 TVFTDHMLTV True PC9_epitope_Rep4 1162.5692456002998 1162.5681499358602 80.596 2 0.18019286054768915 0.0006801564359802754 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 72107 10149 MRDPQTEEF True PC9_epitope_Rep3 1151.49172355559 1151.4906299358602 43.991 2 0.18018761861013416 0.0006801564359802754 0.9438714419765777 ['ENSG00000102241|ENST00000218364|HTATSF1', 'HTATSF1|p.N703Rfs*5|1|0.52|ENSG00000102241|chrX:136511853-136511854|AT/-|frameshift_variant'] 105600 9012 SVEGQLEFR True NCI_RA007_Epitope_Rep2 1063.52982331647 1063.5287299358602 39.655 2 0.18018602329946098 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 72304 6846 MSEIEAKVRY True H1975_Epitope_Rep2 1224.6172584218798 1224.6156149037902 31.25 3 0.1801822400378368 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 28517 8705 FSHAQTVVL True NCI_RA007_Epitope_Rep1 1000.5341804209199 1000.53308993586 37.863 2 0.18017358226777547 0.0006801564359802754 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 34821 19704 GQVEDVVGNL True PC9_epitope_Rep1 1028.5138388991597 1028.51274993586 80.618 2 0.18017245498019455 0.0006801564359802754 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 2142 11406 AELWGEQAEA True H1975_Epitope_Rep3 1102.49310345458 1102.4925749679298 48.989 1 0.18017113796822629 0.0006801564359802754 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 45005 18099 IQLNGRYYL True PC9_epitope_Rep5 1138.61349337078 1138.6123899358602 74.629 2 0.1801687383696084 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6'] 131869 22448 VYDPLFSQL True PC9_epitope_Rep5 1080.54916177872 1080.5480699358602 91.347 2 0.18016752997840094 0.0006801564359802754 0.9438714419765777 ['ENSG00000100104|ENST00000215917|SRRD'] 105618 5557 SVETLKEM[Oxidation]IK True NCI_RA007_Epitope_Rep5 1192.63732554056 1192.63567490379 28.061 3 0.18016589009930714 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 28271 13771 FRVKYETEL True PC9_epitope_Rep5 1183.62372370131 1183.62262993586 57.991 2 0.18016106126093775 0.0006801564359802754 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 38652 9121 HHMGGMAGL True PC9_epitope_Rep5 909.3949271501299 909.39382993586 40.03 2 0.18015916567135276 0.0006801564359802754 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 88934 6362 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 29.46 2 0.18015288392143106 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 138433 18075 YRDWFSSQL True PC9_epitope_Rep6 1200.55637241748 1200.55526993586 82.158 2 0.18015274956786706 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2', 'ENST00000522359.2_1_11:61630757-61632750:+|nuORF'] 32966 13937 GISRQGIIAV True PC9_epitope_Rep5 1012.6029286870798 1012.60182993586 58.63 2 0.1801510698858634 0.0006801564359802754 0.9438714419765777 ['ENSG00000005100|ENST00000225296|DHX33'] 96136 11414 SEDYPAALP True H1975_Epitope_Rep2 961.4392769765699 961.43816993586 48.953 2 0.18014809528964637 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 77597 19936 NYTDIKDYL True PC9_epitope_Rep3 1143.54480467427 1143.54370993586 81.927 2 0.18014630072026228 0.0006801564359802754 0.9438714419765777 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 53059 18771 KSADEVLFTGV True PC9_epitope_Rep3 1164.6026539035602 1164.60154993586 77.423 2 0.1801448349124202 0.0006801564359802754 0.9438714419765777 ['ENSG00000089006|ENST00000377759|SNX5', 'ENST00000490175.5_1_20:17923003-17949420:-|nuORF'] 21690 17141 ERYFISHVL True PC9_epitope_Rep5 1162.61349337078 1162.6118549037901 70.954 3 0.1801421033931191 0.0006801564359802754 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 5326 14584 ALSKEGIVAL True PC9_epitope_Rep2 999.5964463243098 999.59534993586 61.366 2 0.18012798348284545 0.0006801564359802754 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 17542 14251 EHIPESPYL True PC9_epitope_Rep4 1083.52367530687 1083.52256993586 62.721 2 0.1801260601886115 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 76485 10722 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4603699358602 46.269 2 0.1801238773091619 0.0006801564359802754 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 43386 9134 IHQENMGQAL True PC9_epitope_Rep1 1139.53934245435 1139.5382499358602 39.986 2 0.18011039452365116 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 127947 11763 VRPPVQVY True PC9_epitope_Rep1 956.5443511817998 956.54324993586 50.12 2 0.1801027548658737 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 7114 6928 AQYEDIAQKS True PC9_epitope_Rep5 1151.5458673034298 1151.5447699358601 31.618 2 0.1801004482145694 0.0006801564359802754 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 102788 14345 SQESKVLYL True PC9_epitope_Rep3 1065.57062549929 1065.5695299358601 60.263 2 0.18009165286676299 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 54209 16422 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 72.344 2 0.18009003686670452 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 12339 12865 DIVMTQSPDSL True NCI_RA007_Epitope_Rep3 1204.56455414268 1204.56344993586 57.862 2 0.18008866025337475 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000211598|P06312|IGKV4-1'] 24477 22631 FAIDPHLLLSV True PC9_epitope_Rep3 1223.69140933831 1223.6903099358601 92.319 2 0.18008718864938753 0.0006801564359802754 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 43609 19341 IIIPEIQKV True PC9_epitope_Rep1 1051.66413196131 1051.66302993586 79.201 2 0.18008615942958728 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 20075 11898 ENFVAFVDK True NCI_RA007_Epitope_Rep1 1067.5287606873098 1067.52766993586 50.264 2 0.18008334391253267 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 106254 9165 SVQETVLPIK True NCI_RA007_Epitope_Rep5 1112.6441247927198 1112.64302993586 41.902 2 0.180078709526888 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169057|P51608|MECP2', 'ENSG00000169057|ENST00000453960|MECP2'] 35037 6731 GRDENSVEL True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 31.3 2 0.18007231728444695 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 24219 10654 EYVKQTWNL True NCI_RA007_Epitope_Rep4 1179.59242357303 1179.5913299358601 47.83 2 0.1800723163718935 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 76631 8832 NTIDPSHPM True PC9_epitope_Rep3 1010.4491304676201 1010.44802993586 38.922 2 0.18006226184805202 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 65400 9701 LSERYAELY True H1975_Epitope_Rep2 1142.5607890915799 1142.5596899358602 42.299 2 0.18005687195461728 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 31513 10584 GEEWKGYVV True H1975_Epitope_Rep2 1065.5131106231697 1065.51200993586 45.733 2 0.18005372662916794 0.0006801564359802754 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000497406.2_1_12:59414000-59414099:+|nuORF', 'ENST00000397390.3_1_9:19200870-19200993:-|nuORF'] 29224 16476 FVDDYTVRV True PC9_epitope_Rep5 1112.55022440788 1112.54912993586 68.373 2 0.18005159581046873 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 107162 17980 SYNGKLYVF True PC9_epitope_Rep5 1089.54949613189 1089.54838993586 74.178 2 0.18004917936681075 0.0006801564359802754 0.9438714419765777 ['ENSG00000174010|ENST00000328046|KLHL15'] 40391 18224 HRTEMDWVL True PC9_epitope_Rep5 1185.5600778989299 1185.5589899358602 75.111 2 0.18004729603226358 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 86796 13638 QRNPQGFVL True PC9_epitope_Rep1 1057.5668775315298 1057.56578993586 57.313 2 0.18004485758235356 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 137124 8656 YLDESKQLY True H1975_Epitope_Rep1 1157.56045473841 1157.5593499358602 38.224 2 0.18003918549838963 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-7|PRXL2B'] 71343 13311 MHSDMIYNV True PC9_epitope_Rep4 1108.4681516600401 1108.4670499358601 59.096 2 0.18002763357099755 0.0006801564359802754 0.9438714419765777 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 75372 13407 NQDDSILKV True PC9_epitope_Rep5 1030.5294889632999 1030.52838993586 56.587 2 0.18001611413969926 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 1325 7121 AEEAEILHSA True H1975_Epitope_Rep2 1068.5087535187201 1068.5076499358602 32.323 2 0.1800031057510128 0.0006801564359802754 0.9438714419765777 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 135767 5708 YENEVALR True NCI_RA007_Epitope_Rep3 992.4927095317598 992.49160993586 29.427 2 0.18000068065675778 0.0006801564359802754 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 11812 19463 DHLLSVSL True PC9_epitope_Rep5 882.4810822189 882.47998993586 79.917 2 0.17999777388647822 0.0006801564359802754 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 96629 5710 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 26.961 2 0.17998727829418745 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 116291 20016 TVVNFLIRV True PC9_epitope_Rep4 1059.64406522307 1059.64296993586 85.125 2 0.17998143108313436 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 47841 12388 IYSTKLYRF True PC9_epitope_Rep4 1189.6495445263297 1189.64788490379 55.456 3 0.17998135601364407 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENSG00000148925|ENST00000278174|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 61157 13657 LLDIEQDTY True H1975_Epitope_Rep2 1108.52882025696 1108.5277299358602 57.671 2 0.17997888404268392 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 29346 6054 FVEAGAM[Oxidation]AVR True NCI_RA007_Epitope_Rep2 1065.5277155219298 1065.52660993586 28.153 2 0.17997504818067445 0.0006801564359802754 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000414406.2_1_12:20095069-20095366:+|nuORF'] 63741 19372 LPRLPVPAV True PC9_epitope_Rep2 960.6120368187999 960.61092993586 79.89 2 0.17997467985751078 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 140667 14300 YYPSTPGRYSI True PC9_epitope_Rep2 1302.6244519773 1302.62334993586 60.27 2 0.17997407086292525 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 38765 15252 HHYEGAVVIL True PC9_epitope_Rep3 1136.5978433066398 1136.59674993586 63.815 2 0.17996989788306642 0.0006801564359802754 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 40382 16639 HRTEMDWVL True PC9_epitope_Rep2 1185.5600778989299 1185.5589899358602 69.247 2 0.17996817229494494 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 53758 10970 KYFDEHYEY True PC9_epitope_Rep4 1292.53496826656 1292.53333490379 49.968 3 0.17996509680909917 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 28952 8956 FTEQYNEQY True H1975_Epitope_Rep3 1220.4985827578398 1220.4974899358601 39.444 2 0.17995109551386704 0.0006801564359802754 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 17546 16483 EHIPNSPFHVL True PC9_epitope_Rep2 1288.65642081192 1288.65478490379 68.643 3 0.17994999665285583 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 4954 19049 ALIDRMVNL True PC9_epitope_Rep4 1043.57975071435 1043.57864993586 81.361 2 0.17994653184854129 0.0006801564359802754 0.9438714419765777 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 74201 18270 NIANHFFTV True PC9_epitope_Rep4 1061.52942939365 1061.52832993586 78.347 2 0.1799462866949258 0.0006801564359802754 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 30421 11427 GAFVHFHGV True PC9_epitope_Rep2 969.4820852784097 969.48098993586 49.274 2 0.17993731571683855 0.0006801564359802754 0.9438714419765777 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 76569 6706 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 30.706 2 0.17993145481306858 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 83090 22540 PYNDYFEYF True PC9_epitope_Rep2 1256.50260550912 1256.5015099358602 92.193 2 0.17993018639102665 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 7955 17216 ATDIQVLALTY True H1975_Epitope_Rep2 1206.6496040959798 1206.6485099358601 71.512 2 0.1799294087410223 0.0006801564359802754 0.9438714419765777 ['ENSG00000141101|ENST00000268802|NOB1', 'ENST00000502915.1_1_4:139481866-139482694:+|nuORF'] 8068 13815 ATEEAPYWTY True H1975_Epitope_Rep2 1229.5240692296898 1229.5229699358601 58.286 2 0.1799279552834073 0.0006801564359802754 0.9438714419765777 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'CHPT1|p.C163Lfs*31|1|0.31|ENSG00000111666|chr12:101714559-101714560|-/T|frameshift_variant', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 129251 14720 VTDPRVVDLLV True H1975_Epitope_Rep2 1224.70778767844 1224.7066899358601 61.781 2 0.1799267029385781 0.0006801564359802754 0.9438714419765777 ['ENSG00000184983|ENST00000498737|NDUFA6'] 27275 22292 FLYPFPLAL True H1975_Epitope_Rep2 1079.60555445603 1079.6044499358602 92.125 2 0.179918729417669 0.0006801564359802754 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 114219 9866 TRVSQINTL True PC9_epitope_Rep1 1030.5771078620598 1030.5760099358602 42.809 2 0.1799157440114645 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 137311 11984 YLHSQVVSV True PC9_epitope_Rep3 1030.5447451046198 1030.54364993586 51.124 2 0.1799132467472968 0.0006801564359802754 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 120102 12229 VFIDKQTNL True PC9_epitope_Rep2 1076.5866099166 1076.58550993586 52.35 2 0.17990086662994093 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 109566 12970 THASQIELL True PC9_epitope_Rep4 1010.5396597241798 1010.53856993586 57.782 2 0.17989717369037392 0.0006801564359802754 0.9438714419765777 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 9545 10887 AYAIIKEEL True NCI_RA007_Epitope_Rep5 1048.580461907 1048.57936993586 48.517 2 0.17988200582787942 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 84866 9825 QHQSGIVQL True PC9_epitope_Rep2 1008.5352430500798 1008.53414993586 43.127 2 0.17988112531149622 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 67286 5888 LTDPDGALAK True H1975_Epitope_Rep2 999.5236753068699 999.52256993586 27.634 2 0.179878944150522 0.0006801564359802754 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 17459 18369 EHGNFLITV True PC9_epitope_Rep2 1028.52909504048 1028.52857496793 75.986 1 0.17987845620130138 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 75877 17798 NRDPILVSL True PC9_epitope_Rep2 1025.58694426977 1025.58584993586 73.752 2 0.17987793606752991 0.0006801564359802754 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 115299 17362 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54370993586 72.076 2 0.17986643225967833 0.0006801564359802754 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 48970 20428 KFAEEFYSF True PC9_epitope_Rep1 1166.5284263341398 1166.52732993586 83.389 2 0.17985941426958796 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 76525 12848 NTDNLLTEY True H1975_Epitope_Rep1 1081.49276910141 1081.49166993586 54.488 2 0.17985580279342986 0.0006801564359802754 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF'] 106465 19961 SVVESVFKL True PC9_epitope_Rep2 1006.5698972232999 1006.56880993586 82.18 2 0.17985202066589237 0.0006801564359802754 0.9438714419765777 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 7278 22719 ARPPWMWVL True PC9_epitope_Rep1 1154.60590589254 1154.6048099358602 92.193 2 0.1798492981810566 0.0006801564359802754 0.9438714419765777 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 22139 8700 ESYSVYVYK True H1975_Epitope_Rep1 1136.5389910178399 1136.5378899358602 38.393 2 0.1798464630871149 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 87175 20113 QSLEYLEQV True PC9_epitope_Rep1 1107.54480467427 1107.54370993586 82.194 2 0.17983965137852004 0.0006801564359802754 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 95310 14761 SAFDHFASV True PC9_epitope_Rep6 979.43994568291 979.43884993586 68.731 2 0.17983488053260724 0.0006801564359802754 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 81791 11437 PSEYDTPLY True H1975_Epitope_Rep1 1083.47605640811 1083.4749499358602 48.972 2 0.17982298062851512 0.0006801564359802754 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3', 'SETD3|p.Y313Lfs*18|1|0.19|ENSG00000183576|chr14:99405358-99405359|-/A|frameshift_variant'] 11654 15142 DHDGNIVEL True PC9_epitope_Rep3 1010.46688870674 1010.46578993586 63.383 2 0.17981353871845612 0.0006801564359802754 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 1396 14614 AEEFPNLAV True H1975_Epitope_Rep2 988.4865615221598 988.48546993586 61.373 2 0.17981130292883057 0.0006801564359802754 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 106336 10236 SVSDLFNTK True NCI_RA007_Epitope_Rep2 1009.50802524273 1009.50692993586 44.407 2 0.17980472829953545 0.0006801564359802754 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 70339 22122 LYPQFMFHL True PC9_epitope_Rep1 1194.5895871220598 1194.58848993586 89.904 2 0.17980341147168283 0.0006801564359802754 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 70147 15905 LYLDEAHSI True PC9_epitope_Rep1 1059.52367530687 1059.52256993586 65.989 2 0.17980310123986268 0.0006801564359802754 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'SPTLC2|p.A351S|1|0.2|ENSG00000100596|chr14:77555425-77555425|C/A|missense_variant'] 27920 8733 FQNALLVR True NCI_RA007_Epitope_Rep3 959.5552502186699 959.55414993586 41.442 2 0.17980176351950547 0.0006801564359802754 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 131948 11652 VYFSKSEQL True PC9_epitope_Rep2 1099.5549754351498 1099.5538699358601 50.149 2 0.17979852666750273 0.0006801564359802754 0.9438714419765777 ['ENSG00000142627|ENST00000358432|EPHA2'] 41851 18857 IDTIEIITDR True PC9_epitope_Rep1 1187.63976768827 1187.6386699358602 77.317 2 0.17979723582190385 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 104756 13062 STDLQDYTYY True H1975_Epitope_Rep1 1267.52446315251 1267.52387496793 55.33 1 0.17979620477929306 0.0006801564359802754 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 70224 21235 LYLPTLTHF True PC9_epitope_Rep5 1103.6015317047502 1103.6004299358601 86.73 2 0.1797946380995105 0.0006801564359802754 0.9438714419765777 ['ENST00000537473.2_1_12:57058103-57058217:-|nuORF'] 21061 6735 ERDM[Oxidation]SNVSL True PC9_epitope_Rep5 1065.47607387189 1065.4749699358601 30.877 2 0.1797914795641628 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 71131 19683 METVWTILP True H1975_Epitope_Rep1 1088.55761828744 1088.55652993586 81.936 2 0.1797720977965288 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 19689 4778 ELSDIAHR True NCI_RA007_Epitope_Rep2 939.47739382079 939.47628993586 23.216 2 0.17976727458013855 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 87374 6276 QTDKLKELY True H1975_Epitope_Rep2 1136.6077392839998 1136.60664993586 29.084 2 0.1797670409669585 0.0006801564359802754 0.9438714419765777 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 14550 12455 DVDPETLSY True H1975_Epitope_Rep3 1037.45532096353 1037.45477496793 53.102 1 0.17975967105305696 0.0006801564359802754 0.9438714419765777 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 22264 5212 ETDRGMSAEY True H1975_Epitope_Rep3 1157.46590273057 1157.46480993586 25.134 2 0.17975623299377064 0.0006801564359802754 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 17619 7667 EHNDLQYAA True PC9_epitope_Rep5 1059.46213767947 1059.46104993586 34.435 2 0.17974951062120495 0.0006801564359802754 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 103532 16810 SRDDNMFQI True PC9_epitope_Rep2 1124.49205790876 1124.4909699358602 69.909 2 0.17974851197805378 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 6886 14502 AQIKEMVEL True PC9_epitope_Rep4 1059.56343194387 1059.5623299358601 63.695 2 0.17974778026821395 0.0006801564359802754 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 32049 14145 GEVLMVQV True NCI_RA007_Epitope_Rep5 873.4629896266098 873.4624449679301 61.097 1 0.17974692415968266 0.0006801564359802754 0.9438714419765777 ['ENSG00000120948|ENST00000240185|TARDBP'] 88604 13581 RALPELTKL True PC9_epitope_Rep5 1039.6389798426299 1039.6378899358601 57.262 2 0.17974691812357305 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 76780 15534 NVDFDAPLGY True H1975_Epitope_Rep2 1109.5029398622898 1109.50184993586 64.906 2 0.17974629232553363 0.0006801564359802754 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 17346 9107 EHDPVGQMV True PC9_epitope_Rep4 1010.44913046762 1010.44802993586 42.617 2 0.17974227421614875 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 70307 19553 LYPEVFEKF True PC9_epitope_Rep4 1170.5961119711399 1170.5950099358602 83.332 2 0.17974003976842245 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 7076 15750 AQWDIGIAHA True PC9_epitope_Rep6 1080.53524305008 1080.5341499358601 72.813 2 0.17973181950007436 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'WHSC1L1-DDHD2|2|fusion', 'nc|ENSG00000147548|Q9BZ95-2|NSD3', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion', 'WHSC1L1-C15orf55|1|fusion', 'WHSC1L1-DDHD2|1|fusion'] 58393 14766 LEVNLQAMK True PC9_epitope_Rep5 1044.5637662970398 1044.5626699358602 61.796 2 0.17972855616065533 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 17676 20510 EHSIATLLL True PC9_epitope_Rep3 995.56514619603 995.56404993586 84.152 2 0.1797263167221554 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 16546 5658 EEQHPELTP True H1975_Epitope_Rep2 1078.4931034545798 1078.49200993586 26.761 2 0.17972482533259954 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 139395 7228 YTEEDAASY True H1975_Epitope_Rep3 1047.40328539067 1047.4027749679299 32.774 1 0.17972246194212307 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 132420 16077 VYNPELDKW True PC9_epitope_Rep2 1162.5658744720197 1162.56476993586 67.097 2 0.17972065724089945 0.0006801564359802754 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 132969 22230 VYVDDIYVI True PC9_epitope_Rep5 1097.56447748969 1097.5633899358602 90.513 2 0.17971912285105973 0.0006801564359802754 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 85685 16489 QLREAFEQL True PC9_epitope_Rep5 1132.5876725457597 1132.58656993586 68.424 2 0.17971474984462435 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ENSG00000122952|ENST00000373944|ZWINT'] 54283 8350 KYPNVFKKI True PC9_epitope_Rep4 1135.67536535135 1135.67371490379 39.576 3 0.17971177526542306 0.0006801564359802754 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 88321 13144 QYLGQIQHI True PC9_epitope_Rep4 1098.5821932425 1098.58108993586 58.453 2 0.17971080266989234 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 98039 15163 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep1 1277.7343370957499 1277.7332299358602 63.146 2 0.17970532577049872 0.0006801564359802754 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 40805 17822 HVIDSIVGDGI True PC9_epitope_Rep4 1123.5873381925899 1123.58624993586 76.585 2 0.17970271747289704 0.0006801564359802754 0.9438714419765777 ['ENSG00000166801|ENST00000675163|FAM111A'] 102894 11740 SQIDPSSIERA True PC9_epitope_Rep3 1201.5938801250102 1201.59278993586 50.176 2 0.17970129139463378 0.0006801564359802754 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 113630 15300 TRDAGYGGLSL True PC9_epitope_Rep5 1108.5512870370399 1108.55018993586 63.861 2 0.17969489853107967 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 2402 8835 AEQKSNYFEV True H1975_Epitope_Rep3 1213.5615173675699 1213.5604299358602 38.99 2 0.17969236597906 0.0006801564359802754 0.9438714419765777 ['ENSG00000163840|ENST00000296161|DTX3L', 'DTX3L|p.R260Ifs*6|1|0.13|ENSG00000163840|chr3:122568867-122568868|AG/-|frameshift_variant'] 125623 10329 VM[Oxidation]EKSFLEY True H1975_Epitope_Rep2 1160.5423625265598 1160.54126993586 44.739 2 0.17968922430148537 0.0006801564359802754 0.9438714419765777 ['ENST00000513342.5_1_17:46990150-47004493:+|nuORF', 'nc|ENSG00000159202|Q9H832-2|UBE2Z', 'ENSG00000159202|ENST00000360943|UBE2Z'] 90348 15140 RIIDVVYNA True PC9_epitope_Rep4 1061.58694426977 1061.58584993586 66.163 2 0.17968759529583594 0.0006801564359802754 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 89779 15138 RFEEAHFTF True PC9_epitope_Rep2 1182.5458077337796 1182.54470993586 63.488 2 0.17968657271944294 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 25560 13151 FESEFVHIV True H1975_Epitope_Rep3 1105.54441075145 1105.5433099358602 55.834 2 0.17968238631128053 0.0006801564359802754 0.9438714419765777 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 70232 20315 LYMDKFEEF True PC9_epitope_Rep3 1220.5423621461198 1220.54126993586 83.389 2 0.1796707354810106 0.0006801564359802754 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG', 'ENST00000445715.5_1_Y:21755293-21766003:+|nuORF'] 24123 7124 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56899490379 32.411 3 0.17966789504995484 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 115150 22799 TVADVVLWSV True PC9_epitope_Rep2 1087.59136094387 1087.59026993586 93.184 2 0.17966748759015477 0.0006801564359802754 0.9438714419765777 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 27643 10210 FQAPRNPTL True PC9_epitope_Rep6 1042.55597849466 1042.55488993586 49.919 2 0.17966119278714793 0.0006801564359802754 0.9438714419765777 ['TNS4-CCR7|1|fusion', 'ENSG00000131746|ENST00000254051|TNS4'] 9861 16412 AYLSKAMEI True PC9_epitope_Rep3 1024.52631815916 1024.5252299358601 68.266 2 0.17965740762375235 0.0006801564359802754 0.9438714419765777 ['ENSG00000124784|ENST00000379834|RIOK1'] 2174 4497 AEM[Oxidation]PQNYRP True H1975_Epitope_Rep3 1120.4971436696399 1120.4960499358601 22.417 2 0.1796539224230235 0.0006801564359802754 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 116266 11177 TVVERLVKV True PC9_epitope_Rep2 1041.65462990677 1041.6535299358602 48.319 2 0.1796518609581479 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000562408.1_1_16:28128533-28137161:-|nuORF'] 33449 8997 GLGLDESGLAK True H1975_Epitope_Rep1 1058.5607890915799 1058.5596899358602 39.513 2 0.1796507266071031 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 8871 13856 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6965849037902 58.318 3 0.17964822471778025 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 14867 13313 DYFEQYGK True PC9_epitope_Rep5 1048.4501760134401 1048.44906993586 56.221 2 0.17964765123644674 0.0006801564359802754 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 83358 11853 QAQEVFFLK True NCI_RA007_Epitope_Rep5 1108.59169529704 1108.5905899358602 52.25 2 0.17963925812302825 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 37583 16165 GYSEHFVEF True PC9_epitope_Rep6 1113.47672511445 1113.47562993586 74.531 2 0.17963572940865888 0.0006801564359802754 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 128334 10102 VSDKTLSFY True H1975_Epitope_Rep3 1058.52842633414 1058.52732993586 43.899 2 0.17963050205751072 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 127214 11155 VQIEEVRQV True PC9_epitope_Rep1 1098.6033226098998 1098.6022299358601 47.791 2 0.1796290359910898 0.0006801564359802754 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 14843 9247 DYFEEYGK True H1975_Epitope_Rep1 1049.4341915961297 1049.4330899358602 40.48 2 0.17962521282554883 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 20668 10258 EQIEAGTPGRL True PC9_epitope_Rep1 1169.6040508858898 1169.6029499358601 44.34 2 0.1796100261566123 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 43303 11746 IHEPEPHIL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 50.054 2 0.17960580573849044 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 104719 12074 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.5433099358602 51.455 2 0.1796050402962823 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 53074 9921 KSDLFFHDY True H1975_Epitope_Rep1 1170.53457434374 1170.53346993586 43.096 2 0.17959419261659773 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 140415 19504 YYFDSYAHF True PC9_epitope_Rep4 1211.4923751785898 1211.4912699358601 83.141 2 0.1795905357122373 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.E343Kfs*18|1|0.21|ENSG00000111218|chr12:3592277-3592277|G/-|frameshift_variant', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8'] 108710 3815 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 19.693 2 0.1795834167073619 0.0006801564359802754 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 24670 5544 FATHAAALSVR True NCI_RA007_Epitope_Rep3 1142.6196413803798 1142.61799490379 28.803 3 0.17958144185946787 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 53884 15348 KYIDQKFVL True PC9_epitope_Rep5 1152.6542955536 1152.65263490379 64.045 3 0.1795798651743563 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 49337 9253 KIDENQLMY True H1975_Epitope_Rep2 1152.54851015572 1152.54740993586 40.548 2 0.17956955070466696 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN', 'ERBIN|p.D635Mfs*50|1|0.47|ENSG00000112851|chr5:66048775-66048775|A/-|frameshift_variant', 'ERBIN|p.G1049Afs*21|1|0.18|ENSG00000112851|chr5:66054463-66054463|G/-|frameshift_variant'] 138290 14953 YQYPVIIHL True H1975_Epitope_Rep2 1144.6280808057597 1144.6269899358601 62.668 2 0.17956932010959833 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 94632 7445 RYLDKTEQW True NCI_RA007_Epitope_Rep4 1237.6091362663299 1237.60750490379 35.28 3 0.17955872825662245 0.0006801564359802754 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 54106 18471 KYMDVQFDF True PC9_epitope_Rep6 1191.52704643515 1191.5259499358601 83.689 2 0.17955678264840993 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 140352 8017 YYEHVKARF True PC9_epitope_Rep5 1211.60874234351 1211.60710490379 35.775 3 0.1795552372987193 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 95111 11888 RYVEIVSQF True NCI_RA007_Epitope_Rep4 1139.5975089534697 1139.59640993586 52.723 2 0.1795442375275695 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 86114 11809 QPQPQPYAV True PC9_epitope_Rep5 1026.5134449763398 1026.5123499358601 50.419 2 0.17954266083449763 0.0006801564359802754 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 104717 11882 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.5433099358602 50.704 2 0.17952708444697296 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 89271 7072 RELEDDARVIA True H1975_Epitope_Rep3 1285.6626283911698 1285.66099490379 32.17 3 0.17952063040715535 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 61591 18272 LLGPRLVLA True PC9_epitope_Rep4 950.6276868829399 950.62658993586 78.354 2 0.17951960834899633 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 21109 14484 ERDPSPWAV True PC9_epitope_Rep1 1055.50360856863 1055.5025099358602 60.538 2 0.17951148957439397 0.0006801564359802754 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 136440 14642 YHGEVPVSL True PC9_epitope_Rep3 999.5025459394699 999.50144993586 61.454 2 0.1795043560344292 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 132002 20292 VYGPLPQSF True PC9_epitope_Rep2 1006.5123823471798 1006.51128993586 83.475 2 0.17950039288018615 0.0006801564359802754 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 93840 12918 RVFIGNLNTA True PC9_epitope_Rep4 1103.60874234351 1103.60764993586 57.574 2 0.17949823098811654 0.0006801564359802754 0.9438714419765777 ['ENSG00000184672|ENST00000521268|RALYL', 'nc|ENSG00000184672|Q86SE5-3|RALYL'] 7077 17093 AQWHEQILV True PC9_epitope_Rep1 1122.5821932425 1122.58108993586 70.575 2 0.17949552347325354 0.0006801564359802754 0.9438714419765777 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF', 'ARRDC1|p.R234Q|1|0.08|ENSG00000197070|chr9:137614381-137614381|G/A|missense_variant'] 31856 6343 GEPTNFVHTA True NCI_RA007_Epitope_Rep5 1071.49852318819 1071.49742993586 31.073 2 0.179492547497106 0.0006801564359802754 0.9438714419765777 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 56494 5483 LDTNADKQL True NCI_RA007_Epitope_Rep4 1016.51383889916 1016.51274993586 27.675 2 0.17949027440059223 0.0006801564359802754 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 9449 5500 AVVTQVNKV True PC9_epitope_Rep6 956.5654805492 956.56438993586 29.133 2 0.17948107195957497 0.0006801564359802754 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 31690 7258 GEIFSEHSC True H1975_Epitope_Rep2 1007.4018459220299 1007.40074993586 32.852 2 0.17947422250942022 0.0006801564359802754 0.9438714419765777 ['ENSG00000197961|ENST00000320451|ZNF121'] 37378 8635 GVYGDVQRV True PC9_epitope_Rep4 991.5086939490699 991.50758993586 40.702 2 0.179472073698081 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'PTBP2|p.A484Rfs*2|2|0.3|ENSG00000117569|chr1:96813062-96813063|-/T|frameshift_variant', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 103307 10213 SQTTVYEKL True PC9_epitope_Rep3 1067.54989005471 1067.5487899358602 44.236 2 0.17946805913268138 0.0006801564359802754 0.9438714419765777 ['ENSG00000118193|ENST00000367350|KIF14'] 72084 13300 M[Oxidation]RDPIRILV True PC9_epitope_Rep4 1127.64849936095 1127.6474099358602 59.056 2 0.17946734808013914 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 134951 15832 YAFNMKATV True PC9_epitope_Rep1 1043.5110024481899 1043.5099099358602 65.713 2 0.1794658413653594 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 109603 10724 THDEAVQVL True PC9_epitope_Rep3 1010.5032742154598 1010.50216993586 46.204 2 0.17946400241413457 0.0006801564359802754 0.9438714419765777 ['ENSG00000101400|ENST00000217381|SNTA1', 'SNTA1|p.G203Afs*15|1|0.32|ENSG00000101400|chr20:33417812-33417812|C/-|frameshift_variant', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 38822 7097 HIDVGGHMY True H1975_Epitope_Rep3 1027.45455020123 1027.4534499358601 32.268 2 0.1794630796845541 0.0006801564359802754 0.9438714419765777 ['ENSG00000134504|ENST00000580059|KCTD1', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15'] 129274 5353 VTDQASHIY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 25.66 2 0.17946066739274122 0.0006801564359802754 0.9438714419765777 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 11651 15043 DHDGNIVEL True PC9_epitope_Rep1 1010.46688870674 1010.46637496793 62.681 1 0.17945885143510157 0.0006801564359802754 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 125605 16452 VMAPRTVLL True PC9_epitope_Rep5 998.5946725024999 998.59356993586 68.28 2 0.1794484724939402 0.0006801564359802754 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 107041 20740 SYLPFTEAF True PC9_epitope_Rep6 1073.5069626135698 1073.5058699358601 92.535 2 0.17944453747968891 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 114349 12930 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45454993586 54.809 2 0.17944364713820962 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 35640 14360 GTMEWIMIK True NCI_RA007_Epitope_Rep1 1107.54567370475 1107.5445699358602 59.897 2 0.17943455971377184 0.0006801564359802754 0.9438714419765777 ['ENSG00000168273|ENST00000477703|UQCC5'] 54826 13026 LAFNGDLAKA True PC9_epitope_Rep4 1018.5447451046199 1018.54364993586 57.999 2 0.17943077522500717 0.0006801564359802754 0.9438714419765777 ['TNKS1BP1|p.S1554Vfs*72|1|0.21|ENSG00000149115|chr11:57302483-57302483|G/-|frameshift_variant', 'ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000528882.5_1_11:57067274-57087552:-|nuORF'] 104196 15971 SSDGAISLLTY True H1975_Epitope_Rep2 1125.55536935797 1125.55426993586 66.632 2 0.17942868577069118 0.0006801564359802754 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 1813 4339 AEIDNIKNQRA True H1975_Epitope_Rep2 1270.6629627443401 1270.66132490379 21.805 3 0.1794202977824719 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 140346 8096 YYEHVKARF True PC9_epitope_Rep1 1211.60874234351 1211.60710490379 35.967 3 0.17941667867690306 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 42229 3743 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep2 1056.52738116876 1056.5262899358602 19.392 2 0.17941367987637585 0.0006801564359802754 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 8179 7836 ATGDVALLR True NCI_RA007_Epitope_Rep4 914.5185303567799 914.51742993586 36.84 2 0.17940931826436446 0.0006801564359802754 0.9438714419765777 ['ENSG00000100605|ENST00000267615|ITPK1'] 10102 16969 AYVPGFAHI True PC9_epitope_Rep4 973.5021520166499 973.50104993586 73.262 2 0.17940335955123105 0.0006801564359802754 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 103334 12285 SQVDVAVKI True PC9_epitope_Rep4 957.5494961318899 957.54838993586 55.07 2 0.17940112020100346 0.0006801564359802754 0.9438714419765777 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000486256.5_1_7:6777360-6777438:+|nuORF'] 33221 14389 GLADNTVIAKV True PC9_epitope_Rep4 1099.62372370131 1099.62262993586 63.257 2 0.17939905474612758 0.0006801564359802754 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 110325 22554 TIITTLENL True PC9_epitope_Rep5 1016.57537652656 1016.57426993586 91.757 2 0.17939770955161308 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 75669 16755 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53856993586 69.275 2 0.17939338834063462 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 40557 5240 HSSNVKVVL True NCI_RA007_Epitope_Rep4 981.5607295219299 981.55962993586 26.694 2 0.17938692235570627 0.0006801564359802754 0.9438714419765777 ['ENSG00000055483|ENST00000449938|USP36', 'USP36|p.K1086Nfs*25|1|0.3|ENSG00000055483|chr17:78798534-78798534|T/-|frameshift_variant', 'USP36|p.Q806Rfs*91|1|0.52|ENSG00000055483|chr17:78803778-78803778|T/-|frameshift_variant'] 40237 12869 HRIEEVPEL True PC9_epitope_Rep5 1120.58767254576 1120.58656993586 54.509 2 0.17938567710440628 0.0006801564359802754 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 95090 18460 RYSTGLAGNLL True PC9_epitope_Rep3 1163.6298717109098 1163.6287699358602 76.209 2 0.1793839871109768 0.0006801564359802754 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 97410 12238 SGFSGVIRL True H1975_Epitope_Rep3 934.52361573722 934.52250993586 52.248 2 0.17938068286972866 0.0006801564359802754 0.9438714419765777 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 93696 16091 RTLETLIRL True PC9_epitope_Rep4 1113.6869926642098 1113.6858899358601 69.831 2 0.1793806244220876 0.0006801564359802754 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 31213 18638 GDLENAFLNL True H1975_Epitope_Rep3 1104.54513902744 1104.5440499358601 78.155 2 0.17937955866853275 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 41171 20609 HYTYILEVF True PC9_epitope_Rep4 1183.5913609438696 1183.59026993586 87.426 2 0.17937937780428204 0.0006801564359802754 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 130268 8316 VTSTFIIEK True NCI_RA007_Epitope_Rep3 1036.5804619069997 1036.57936993586 39.83 2 0.1793793378968184 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 123786 2645 VITEEEKNFK True NCI_RA007_Epitope_Rep5 1235.63976768827 1235.63812490379 14.861 3 0.17937652428197406 0.0006801564359802754 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000484610.5_1_16:89627907-89629447:+|nuORF', 'ENST00000570149.1_1_16:89628679-89629447:+|nuORF'] 9448 5428 AVVTQVNKV True PC9_epitope_Rep6 956.5654805492 956.56438993586 28.791 2 0.17937174702389677 0.0006801564359802754 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 7966 15309 ATDLDVANFY True H1975_Epitope_Rep1 1127.51350454599 1127.5124099358602 64.154 2 0.17937152396016331 0.0006801564359802754 0.9438714419765777 ['ENSG00000142252|ENST00000270257|GEMIN7'] 2854 12812 AEWLGVLKA True NCI_RA007_Epitope_Rep3 985.5596668927699 985.55856993586 57.638 2 0.17937148480210346 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 39697 9975 HPTWALKEA True PC9_epitope_Rep3 1051.5450794577898 1051.54398993586 43.324 2 0.17937029049815728 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 17540 15648 EHIPESPYL True PC9_epitope_Rep1 1083.52367530687 1083.52256993586 65.011 2 0.17936992757512604 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 133197 4819 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 23.627 2 0.17936756579493165 0.0006801564359802754 0.9438714419765777 ['AluSp_dup17171|chr6:42956085-42956345:+|4.405465577973595|0.2092895351215914|4.4|502.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.0483672628645049|0.0949023208327711|3.47|501.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 37817 15912 HDDYLVMLK True PC9_epitope_Rep1 1132.5586809166 1132.55758993586 66.016 2 0.17935953356036044 0.0006801564359802754 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 20671 9186 EQIEAGTPGRL True PC9_epitope_Rep4 1169.6040508858898 1169.6029499358601 42.927 2 0.17935503148881807 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 92077 6874 RPSPPVQSV True PC9_epitope_Rep5 965.52942939365 965.52832993586 31.411 2 0.17934623955504084 0.0006801564359802754 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 128904 8639 VSTEVDARL True PC9_epitope_Rep6 988.5189242795998 988.51782993586 43.049 2 0.17934600355364178 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 106867 16009 SYIEHIFEI True NCI_RA007_Epitope_Rep5 1149.57062549929 1149.5695299358601 68.305 2 0.17933591835213541 0.0006801564359802754 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 133272 12298 WEIENNPTV True H1975_Epitope_Rep1 1100.51383889916 1100.5132749679299 52.331 1 0.1793350392514128 0.0006801564359802754 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 127950 10926 VRPPVQVY True PC9_epitope_Rep2 956.5443511817998 956.54324993586 47.348 2 0.17933386100960216 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 91048 21176 RLLDLENIQI True PC9_epitope_Rep2 1225.70303665117 1225.70192993586 86.908 2 0.17933192298464223 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'AOAH-ELMO1|1|fusion', 'AOAH-ELMO1|2|fusion', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ENST00000487843.1_1_7:36895158-37025590:-|nuORF', 'nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 90483 5621 RKAALEQDL True NCI_RA007_Epitope_Rep2 1042.5771078620598 1042.5760099358602 26.478 2 0.17933012115526886 0.0006801564359802754 0.9438714419765777 ['ENSG00000100292|ENST00000216117|HMOX1'] 112053 13858 TLTEEGVIKV True PC9_epitope_Rep4 1087.6124903112698 1087.6113899358602 61.207 2 0.17932395326730743 0.0006801564359802754 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 76629 8278 NTIDPSHPM True PC9_epitope_Rep2 1010.4491304676201 1010.44802993586 37.199 2 0.17931682153717654 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 2145 8354 AELWKNPTA True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 37.086 2 0.17931501447712989 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|494|14.5|0.62|4.54|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C', 'chr20:45815540-45815854|495|17.2|0.56|4.94|+|ENST00000617055|UBE2C,UBE2C', 'nc|ENSG00000175063|O00762-3|UBE2C', 'nc|ENSG00000175063|O00762-4|UBE2C', 'chr20:45814470-45815390|498|22.16|0.65|5.09|+|ENST00000335046|UBE2C,UBE2C'] 43321 9251 IHEPEPHIL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 45.735 2 0.17930909201804532 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 77403 12728 NYLVLPNRI True NCI_RA007_Epitope_Rep5 1100.63422881536 1100.63312993586 55.623 2 0.17930837575817732 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 112703 4477 TPGPGAQSALR True H1975_Epitope_Rep3 1053.55670677065 1053.55560993586 22.339 2 0.17930770507605154 0.0006801564359802754 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14'] 102034 6522 SPPPPPPPP True NCI_RA007_Epitope_Rep1 881.4647038787699 881.46360993586 29.384 2 0.17930640852615704 0.0006801564359802754 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 28731 18583 FSWEGAFQHV True PC9_epitope_Rep6 1206.54580773378 1206.54470993586 84.121 2 0.17929906955410982 0.0006801564359802754 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 70984 14893 M[Oxidation]EQISQFLQAA True H1975_Epitope_Rep2 1280.60708804144 1280.6059899358602 62.44 2 0.17929559618589178 0.0006801564359802754 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 64156 13787 LQFDKAINA True PC9_epitope_Rep3 1018.5447451046199 1018.54364993586 58.11 2 0.17929367212853148 0.0006801564359802754 0.9438714419765777 ['ENSG00000140307|ENST00000396060|GTF2A2'] 89001 11064 REDPNWWQA True H1975_Epitope_Rep2 1200.5312202988 1200.53012993586 47.588 2 0.17929157619748146 0.0006801564359802754 0.9438714419765777 ['ENSG00000105926|ENST00000222644|PALS2', 'MPP6|p.K307Efs*14|1|0.21|ENSG00000105926|chr7:24666046-24666047|-/A|frameshift_variant'] 130739 10908 VVDPNDPQM True PC9_epitope_Rep1 1013.44879611445 1013.44768993586 46.843 2 0.17928784956721308 0.0006801564359802754 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 86683 17690 QRIDEFEAL True PC9_epitope_Rep5 1119.5560380643099 1119.5549499358601 73.06 2 0.17928410043703336 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 28168 12169 FRMTDQEAI True PC9_epitope_Rep4 1109.5175443806097 1109.51644993586 54.624 2 0.1792826739077218 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 52656 8545 KQFEKQVEL True PC9_epitope_Rep1 1147.6237237013097 1147.62262993586 37.705 2 0.17927830216935683 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 77375 12365 NYLSHHLTI True PC9_epitope_Rep2 1096.5665431783602 1096.5654499358602 52.871 2 0.17927707839370738 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 75572 19695 NQPGVLIQV True PC9_epitope_Rep1 966.5498304850599 966.54872993586 80.582 2 0.1792726159173237 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 86680 16106 QRIDEFEAL True PC9_epitope_Rep4 1119.5560380643099 1119.5549499358601 69.889 2 0.1792679158276311 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 102929 14959 SQIHDIVLV True PC9_epitope_Rep6 1022.5760452328999 1022.5754749679301 69.55 1 0.17925786432864185 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 4674 14948 ALDENGNLWY True H1975_Epitope_Rep1 1193.53530261973 1193.5342099358602 62.736 2 0.1792546917562282 0.0006801564359802754 0.9438714419765777 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1'] 53406 17189 KVFDPVPVGV True PC9_epitope_Rep4 1055.60153170475 1055.6004299358601 74.122 2 0.1792541428673224 0.0006801564359802754 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000490519.1_1_1:182845328-182845691:+|nuORF'] 72625 12375 MVVQDGIVKA True PC9_epitope_Rep1 1058.57941636118 1058.57830993586 52.459 2 0.1792495245885105 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 54054 20344 KYLTAEAFGF True PC9_epitope_Rep2 1145.5757108797297 1145.57460993586 83.675 2 0.1792329757042334 0.0006801564359802754 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 32603 10099 GHDASQITL True PC9_epitope_Rep5 940.46140940348 940.46030993586 43.83 2 0.17922894537269804 0.0006801564359802754 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 25603 10865 FETEFNTQP True H1975_Epitope_Rep2 1111.48220441771 1111.48110993586 46.822 2 0.17922642471973943 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 81756 14262 PSDLTVGQFY True H1975_Epitope_Rep3 1125.5342399905699 1125.53367496793 60.201 1 0.17922582466220527 0.0006801564359802754 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 101743 16428 SPHGLVMVGV True PC9_epitope_Rep1 994.5269868654999 994.52588993586 68.013 2 0.1792253383750946 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 32025 9123 GEVFKTYNV True H1975_Epitope_Rep2 1055.5287606873098 1055.52766993586 40.044 2 0.17921901313643526 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 36384 22228 GVIAEILRGV True PC9_epitope_Rep1 1025.6233297784897 1025.62222993586 90.322 2 0.17921478403430835 0.0006801564359802754 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 28072 9509 FRDQNPEQL True PC9_epitope_Rep1 1145.5465360097699 1145.54542993586 41.431 2 0.17920772620667197 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 93806 20158 RVADILTQL True PC9_epitope_Rep5 1027.60259433391 1027.6014899358602 82.586 2 0.17920337228472027 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 21614 21189 ERSPLLFTL True PC9_epitope_Rep3 1074.60734536118 1074.6062499358602 86.791 2 0.17920017335537786 0.0006801564359802754 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 59867 16902 LHGNIITSL True PC9_epitope_Rep3 966.54983048506 966.54872993586 70.172 2 0.17919577547420942 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF', 'CEP97|p.V352Lfs*3|1|0.33|ENSG00000182504|chr3:101757658-101757658|G/-|frameshift_variant'] 48759 8809 KEQEWTPIT True H1975_Epitope_Rep2 1130.5607890915799 1130.5596899358602 38.85 2 0.17918866986715598 0.0006801564359802754 0.9438714419765777 ['ENST00000471757.5_1_2:96691131-96693504:-|nuORF', 'nc|ENSG00000186281|Q6NUI2-3|GPAT2', 'ENST00000486463.5_1_2:96687909-96693504:-|nuORF', 'ENST00000484440.5_1_2:96688852-96698107:-|nuORF', 'nc|ENSG00000186281|Q6NUI2|GPAT2', 'ENSG00000186281|ENST00000434632|GPAT2', 'nc|ENSG00000186281|Q6NUI2-5|GPAT2'] 132282 20114 VYLDKFIRL True PC9_epitope_Rep3 1165.68593003505 1165.68482993586 82.62 2 0.17918554039096377 0.0006801564359802754 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 103333 13562 SQVDVAVKI True PC9_epitope_Rep3 957.5494961318899 957.54838993586 57.22 2 0.1791830981880366 0.0006801564359802754 0.9438714419765777 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000486256.5_1_7:6777360-6777438:+|nuORF'] 74052 10255 NHSLVTSDL True PC9_epitope_Rep2 984.4876241513201 984.48652993586 44.778 2 0.17918117315163734 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4'] 113238 7028 TQDTQPHYI True PC9_epitope_Rep4 1101.50908787189 1101.50798993586 34.284 2 0.17918068254662264 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 131810 19544 VYAPPVGGF True PC9_epitope_Rep2 905.4647038787698 905.46360993586 80.559 2 0.17917250477954305 0.0006801564359802754 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 52734 20776 KQLEDILVL True PC9_epitope_Rep1 1069.63831113629 1069.63720993586 84.743 2 0.17916818077225546 0.0006801564359802754 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 34567 12061 GQFSGFPFEK True NCI_RA007_Epitope_Rep3 1142.53965972418 1142.53856993586 54.563 2 0.17916105015923503 0.0006801564359802754 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 75860 8797 NRDMTTAEI True PC9_epitope_Rep5 1049.48115887189 1049.48006993586 38.78 2 0.17914963553305366 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'nc|ENSG00000068885|Q9P2H3-2|IFT80', 'ENSG00000068885|ENST00000326448|IFT80'] 39956 8956 HQQSIPAVL True NCI_RA007_Epitope_Rep5 991.5450794577898 991.5439899358599 41.108 2 0.17913995200340072 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 7990 3890 ATDPDDTHAY True H1975_Epitope_Rep3 1104.43598250128 1104.4348899358602 20.085 2 0.17913816039272853 0.0006801564359802754 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 39975 13186 HQQSIPAVL True PC9_epitope_Rep5 991.5450794577898 991.5439899358599 55.725 2 0.17913330446070688 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 9979 12575 AYSRVQYQF True PC9_epitope_Rep2 1160.5614577979202 1160.56036993586 53.678 2 0.17913329634060948 0.0006801564359802754 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 14682 9089 DVNQQEFVR True PC9_epitope_Rep2 1133.5465360097699 1133.54542993586 40.302 2 0.1791323937626615 0.0006801564359802754 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 98427 20625 SIIQRLLEV True PC9_epitope_Rep4 1069.64954452633 1069.64844993586 87.49 2 0.17912843709104617 0.0006801564359802754 0.9438714419765777 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 28344 13052 FSDDSDLQL True NCI_RA007_Epitope_Rep5 1038.4505699362599 1038.4494699358602 56.881 2 0.1791281623908863 0.0006801564359802754 0.9438714419765777 ['ENSG00000025800|ENST00000373625|KPNA6'] 97729 16206 SHFSEEVLL True PC9_epitope_Rep4 1059.52367530687 1059.52256993586 70.281 2 0.179120600319569 0.0006801564359802754 0.9438714419765777 ['ENSG00000110628|ENST00000649076|SLC22A18'] 103720 5025 SREESAGPAL True PC9_epitope_Rep4 1015.4934378077497 1015.49234993586 25.956 2 0.17911216819231104 0.0006801564359802754 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 45398 11988 ISDRLIGIY True H1975_Epitope_Rep1 1048.59169529704 1048.5905899358602 51.119 2 0.1791093557065011 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'SMC4|p.E1257Q|1|0.11|ENSG00000113810|chr3:160433711-160433711|G/C|missense_variant'] 132564 20193 VYPLMKEYF True PC9_epitope_Rep2 1188.5889184157197 1188.58782993586 83.087 2 0.1791056043981485 0.0006801564359802754 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 37379 10134 GVYGDVQRV True PC9_epitope_Rep5 991.5086939490699 991.50758993586 43.965 2 0.17910443080660365 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'PTBP2|p.A484Rfs*2|2|0.3|ENSG00000117569|chr1:96813062-96813063|-/T|frameshift_variant', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 115290 17167 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54370993586 71.484 2 0.1791038085643182 0.0006801564359802754 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 114913 7943 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51807496793 35.5 1 0.17909964836670147 0.0006801564359802754 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 3488 9908 AGLQFPVGR True H1975_Epitope_Rep3 943.5239500903898 943.52284993586 43.142 2 0.1790993377417475 0.0006801564359802754 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 39924 13954 HQLSQLQAL True PC9_epitope_Rep3 1036.5665431783598 1036.5654499358602 58.751 2 0.17909502193152993 0.0006801564359802754 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 6833 19172 AQIDHYLGL True PC9_epitope_Rep3 1028.52909504048 1028.5279899358602 78.964 2 0.17909129427562995 0.0006801564359802754 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 131001 19161 VVLGEFGVRNV True PC9_epitope_Rep3 1187.6662572196299 1187.6651699358601 78.922 2 0.17908094809187972 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 115427 19964 TVFDEAIRAV True PC9_epitope_Rep2 1119.59242357303 1119.5913299358601 82.191 2 0.17907598653426798 0.0006801564359802754 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 134506 20333 WVDPNSPVL True PC9_epitope_Rep1 1025.51819600361 1025.51767496793 83.041 1 0.17907380673537213 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 137971 7784 YQAEAREAL True PC9_epitope_Rep1 1049.5141732523298 1049.5130699358601 34.765 2 0.1790656971106696 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 123646 15442 VILPTVHEV True PC9_epitope_Rep2 1005.5858816406101 1005.58478993586 64.675 2 0.17906494529087583 0.0006801564359802754 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 89423 4613 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 22.867 3 0.17906357859037855 0.0006801564359802754 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 107278 20364 SYQKVIELF True PC9_epitope_Rep3 1125.6070110080097 1125.60647496793 83.579 1 0.17906329042378902 0.0006801564359802754 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 132250 13183 VYKTIM[Oxidation]EQF True PC9_epitope_Rep5 1173.5739970080097 1173.57288993586 55.713 2 0.17906258043679307 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 72378 9763 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4684899358601 42.542 2 0.17906257092028377 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 75823 19593 NRDEMLVVL True PC9_epitope_Rep5 1087.5695799534699 1087.56848993586 80.416 2 0.1790604468051505 0.0006801564359802754 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 108436 5427 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 25.901 2 0.17905909776447457 0.0006801564359802754 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 46790 12304 IVDGDVVHGFY True H1975_Epitope_Rep2 1219.5873381925899 1219.58624993586 52.411 2 0.17905535530493732 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 6701 8155 AQATISFPK True NCI_RA007_Epitope_Rep4 961.5232813840499 961.52218993586 38.158 2 0.17905050786261273 0.0006801564359802754 0.9438714419765777 ['ENSG00000094804|ENST00000209728|CDC6'] 59731 4452 LGVIEDHSNR True NCI_RA007_Epitope_Rep4 1138.5730851107799 1138.57144490379 23.499 3 0.17904838399311904 0.0006801564359802754 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 43301 11560 IHEPEPHIL True PC9_epitope_Rep1 1083.57129420563 1083.57018993586 49.344 2 0.1790421273046745 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 106729 19712 SYDPDFNQL True PC9_epitope_Rep1 1097.46655435357 1097.46544993586 80.648 2 0.17903128096374984 0.0006801564359802754 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 100255 19305 SLLQTLYKV True PC9_epitope_Rep4 1063.62774645259 1063.62664993586 82.363 2 0.17901614757432502 0.0006801564359802754 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 11934 11966 DHSNLIRSL True PC9_epitope_Rep5 1053.5567067706502 1053.55560993586 51.023 2 0.17901577112147585 0.0006801564359802754 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2'] 8868 12120 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6971299358602 54.427 2 0.1789979867667922 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 49082 7529 KFVETHPEF True NCI_RA007_Epitope_Rep4 1132.5553097883198 1132.5542099358602 35.604 2 0.1789954462839781 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 2699 10099 AETHYTYFP True H1975_Epitope_Rep2 1127.49237517859 1127.4912699358601 43.84 2 0.17899269387799996 0.0006801564359802754 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF', 'nc|ENSG00000158773|P22415-2|USF1'] 9588 19932 AYDTVRWEF True PC9_epitope_Rep2 1185.5454733806098 1185.54436993586 82.065 2 0.17898919140634623 0.0006801564359802754 0.9438714419765777 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 39872 11467 HQIEAVDGEEL True PC9_epitope_Rep4 1238.5778957076998 1238.57678993586 51.871 2 0.17898851060027346 0.0006801564359802754 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 31348 9135 GEALPHVVP True H1975_Epitope_Rep3 917.49706663621 917.49596993586 40.127 2 0.1789836204793679 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 114668 5194 TSREVQTAV True PC9_epitope_Rep5 989.5141732523299 989.51306993586 24.996 2 0.17898149566532098 0.0006801564359802754 0.9438714419765777 ['ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1'] 18279 6324 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep3 1176.6060254122801 1176.6049299358601 31.879 2 0.17898094210684726 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 102895 10509 SQIDPSSIERA True PC9_epitope_Rep4 1201.5938801250102 1201.59278993586 48.146 2 0.17898058280840679 0.0006801564359802754 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 103630 18146 SRDLFTYTV True PC9_epitope_Rep2 1100.55022440788 1100.54912993586 75.101 2 0.17897776144041527 0.0006801564359802754 0.9438714419765777 ['ENSG00000121281|ENST00000673801|ADCY7'] 7813 7011 ATADLALGR True NCI_RA007_Epitope_Rep2 886.4872302284999 886.48612993586 31.894 2 0.1789744756523973 0.0006801564359802754 0.9438714419765777 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160056-49160527:-|nuORF'] 97977 18497 SHSDYLLTI True PC9_epitope_Rep2 1047.52367530687 1047.52256993586 76.484 2 0.17897345996346628 0.0006801564359802754 0.9438714419765777 ['ENSG00000120833|ENST00000551556|SOCS2'] 45147 9479 IRAPSGTSL True PC9_epitope_Rep5 900.50288029264 900.50178993586 41.417 2 0.17896802771205142 0.0006801564359802754 0.9438714419765777 ['ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4'] 21855 9955 ESEDPNYYQY True H1975_Epitope_Rep3 1306.49897668066 1306.49786993586 43.325 2 0.17896283733619137 0.0006801564359802754 0.9438714419765777 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2'] 137997 18831 YQAPDIDVQL True PC9_epitope_Rep6 1160.57135377528 1160.5702499358601 85.077 2 0.17895737531471093 0.0006801564359802754 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 21057 6112 ERDM[Oxidation]SNVSL True PC9_epitope_Rep2 1065.47607387189 1065.4749699358601 28.903 2 0.17895666570410848 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 28926 7291 FTENDKEYQEY True H1975_Epitope_Rep1 1464.6045043783597 1464.60340993586 33.056 2 0.17895627659246569 0.0006801564359802754 0.9438714419765777 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 45205 17240 IRKPYIWEY True PC9_epitope_Rep1 1266.67609362734 1266.6744449037901 71.132 3 0.17895533274077927 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 49329 7704 KIDEHHFVAV True PC9_epitope_Rep4 1193.6193070272102 1193.61766490379 37.019 3 0.17895286867481108 0.0006801564359802754 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 127039 20862 VPYLVGQVV True PC9_epitope_Rep5 972.5644179200399 972.56332993586 85.297 2 0.1789516574509888 0.0006801564359802754 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 84804 21499 QHIPTPLFVL True PC9_epitope_Rep1 1163.6702799709099 1163.66918993586 87.54 2 0.17895090577817824 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008838|O75448-2|MED24', 'ENSG00000008838|ENST00000394128|MED24'] 18270 6745 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1176.6060254122801 1176.6049299358601 30.899 2 0.17894529864212713 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 67383 5250 LTDTPKATSY True H1975_Epitope_Rep3 1095.54480467427 1095.54370993586 25.278 2 0.1789404096026316 0.0006801564359802754 0.9438714419765777 ['ENST00000466854.5_1_3:122081873-122084420:-|nuORF', 'ENST00000460810.1_1_3:122081873-122084409:-|nuORF'] 127373 17974 VQPSLFYHL True PC9_epitope_Rep6 1102.58113061334 1102.58002993586 81.764 2 0.17893785855055092 0.0006801564359802754 0.9438714419765777 ['MAP3K6|p.D642*|1|0.14|ENSG00000142733|chr1:27360835-27360836|-/A|frameshift_variant', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'ENSG00000142733|ENST00000357582|MAP3K6'] 116702 20678 TYKDYVDLF True PC9_epitope_Rep5 1162.55464108198 1162.55354993586 84.593 2 0.17893414695183582 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 47768 10956 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65880490379 47.461 3 0.1789267830241216 0.0006801564359802754 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 123415 11678 VIDSAELQAY True H1975_Epitope_Rep1 1107.54480467427 1107.54370993586 49.908 2 0.17892369239015854 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 7835 6373 ATAGIIGVNR True NCI_RA007_Epitope_Rep3 970.5559784946599 970.55488993586 32.07 2 0.17891510911914574 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 140325 10685 YYEEQHPEL True PC9_epitope_Rep2 1206.5193182024198 1206.51822993586 46.413 2 0.17891171342604265 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 94670 7844 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.6154299358602 36.87 2 0.17891032770344922 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 2451 5767 AEQMASVQNA True H1975_Epitope_Rep2 1047.46550880775 1047.4644099358602 27.177 2 0.17890774853397975 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 60659 11146 LITPAVVSER True PC9_epitope_Rep6 1083.62880908175 1083.6277099358601 53.824 2 0.17890538369376982 0.0006801564359802754 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 136429 15424 YHGAEIVSL True PC9_epitope_Rep3 987.50254593947 987.50144993586 64.483 2 0.17889589461732341 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 113626 13896 TRDAGYGGLSL True PC9_epitope_Rep4 1108.5512870370399 1108.55018993586 61.352 2 0.17889276517413324 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 25559 13274 FESEFVHIV True H1975_Epitope_Rep2 1105.54441075145 1105.5433099358602 56.188 2 0.17889047571680872 0.0006801564359802754 0.9438714419765777 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 102577 16599 SQANIAQVL True PC9_epitope_Rep4 942.5134449763399 942.51289496793 71.823 1 0.17888560462730152 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 48721 6752 KENEGFTVTA True H1975_Epitope_Rep3 1094.52440358286 1094.5233099358602 30.924 2 0.17888242997593268 0.0006801564359802754 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3'] 74293 17905 NIIPRFVQV True PC9_epitope_Rep6 1084.6393141958001 1084.63820993586 81.496 2 0.17887868106047256 0.0006801564359802754 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C'] 116382 8962 TVYSGEEKL True PC9_epitope_Rep5 1024.5076908895599 1024.5065899358601 39.415 2 0.1788767332222703 0.0006801564359802754 0.9438714419765777 ['ENSG00000166224|ENST00000373202|SGPL1'] 93899 20060 RVIDYILDL True PC9_epitope_Rep6 1118.63356010902 1118.6324699358602 89.827 2 0.17887085780920461 0.0006801564359802754 0.9438714419765777 ['ID3|p.Q71K|1|0.16|ENSG00000117318|chr1:23559216-23559216|G/T|missense_variant', 'ENSG00000117318|ENST00000374561|ID3'] 7258 9855 ARNTVTQVL True PC9_epitope_Rep5 1000.5665431783599 1000.56544993586 42.876 2 0.17886952765244032 0.0006801564359802754 0.9438714419765777 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000607039.1_1_1:112999611-113005178:+|nuORF'] 138978 10066 YSEVYPGQQY True H1975_Epitope_Rep1 1232.5349682665599 1232.5338699358601 43.659 2 0.178860135374925 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 109891 11662 THNIIVNQL True PC9_epitope_Rep6 1050.5821932425 1050.58108993586 55.985 2 0.1788589372402842 0.0006801564359802754 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 139823 5796 YVDGVEVH True NCI_RA007_Epitope_Rep5 916.42904664604 916.4279499358599 28.981 2 0.17885548444963797 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 35139 5755 GRYAGEESL True PC9_epitope_Rep6 980.4563240230399 980.45522993586 30.302 2 0.17884991714801768 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 113986 19484 TRLPEFSEL True PC9_epitope_Rep1 1090.56587447202 1090.56476993586 79.764 2 0.17884866672723365 0.0006801564359802754 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 57832 9224 LEPVAVELK True H1975_Epitope_Rep1 996.58554728744 996.58444993586 40.39 2 0.17884448378172751 0.0006801564359802754 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 118305 11777 VDDGLISLQVK True H1975_Epitope_Rep3 1185.6605031328502 1185.6594099358601 50.444 2 0.1788430157893174 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 84095 9077 QEQFNSIAA True H1975_Epitope_Rep2 1006.4719740871798 1006.47086993586 39.866 2 0.17883593468802292 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 15435 5851 EANEILQR True NCI_RA007_Epitope_Rep2 971.5036085686299 971.50250993586 27.377 2 0.1788351656427827 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF', 'ENST00000407347.2_1_6:18367150-18368330:-|nuORF', 'ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 140520 10206 YYITTRAQF True NCI_RA007_Epitope_Rep4 1161.58185888933 1161.5807699358602 46.112 2 0.1788315121748525 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 135890 5737 YESLTDPSK True NCI_RA007_Epitope_Rep2 1038.48695544498 1038.4858499358602 26.931 2 0.17882942162381635 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 67617 2723 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 14.565 2 0.1788247305046291 0.0006801564359802754 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 101308 19060 SLYGQFRVV True PC9_epitope_Rep1 1067.5763795860698 1067.5752899358602 78.105 2 0.17882056419590878 0.0006801564359802754 0.9438714419765777 ['BIRC6-YIPF4|1|fusion', 'ENSG00000119820|ENST00000238831|YIPF4'] 98108 19705 SIAGIFKEV True PC9_epitope_Rep5 962.54368247546 962.54258993586 80.842 2 0.17881966840119098 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2', 'ENST00000493599.1_1_20:44979343-44980935:-|nuORF', 'ENST00000480329.5_1_20:44979343-44983832:-|nuORF'] 40132 13947 HRDSGILGL True PC9_epitope_Rep3 966.5246783663799 966.52358993586 58.724 2 0.17881911744783657 0.0006801564359802754 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 103603 15963 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.60010993586 66.209 2 0.17881640946454547 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 47524 16374 IYLPYLHEW True NCI_RA007_Epitope_Rep4 1232.62299542532 1232.62188993586 70.985 2 0.17881268809513515 0.0006801564359802754 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 27406 6220 FNDPNAKEM True PC9_epitope_Rep4 1064.45969515132 1064.4585899358601 30.971 2 0.17881242638244496 0.0006801564359802754 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 109501 16679 THAAEDIVYTL True PC9_epitope_Rep4 1231.6084675599898 1231.60736993586 72.131 2 0.17879898598989794 0.0006801564359802754 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 17381 12318 EHFDASHVAL True PC9_epitope_Rep1 1124.5250722892 1124.52343490379 52.236 3 0.17879061453531647 0.0006801564359802754 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH'] 99171 22303 SLAQYLINV True PC9_epitope_Rep3 1019.5651461960299 1019.56404993586 91.073 2 0.17879030878441002 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 103546 15256 SRDDNMFQI True PC9_epitope_Rep6 1124.49205790876 1124.4909699358602 70.79 2 0.17878859375002162 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 23974 18350 EYPDRIMNTF True PC9_epitope_Rep2 1284.5808729131597 1284.5797699358602 75.914 2 0.17878762032460632 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 27191 17558 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55750993586 72.845 2 0.17878624129702303 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 20535 16745 EQAAWYHTL True PC9_epitope_Rep5 1117.51925863277 1117.5181699358602 69.416 2 0.1787793094789211 0.0006801564359802754 0.9438714419765777 ['ENSG00000170915|ENST00000442253|PAQR8'] 123566 16459 VIIKGLEEI True PC9_epitope_Rep6 1012.6168474157199 1012.61574993586 75.723 2 0.17877910410955802 0.0006801564359802754 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 71442 10471 M[Oxidation]ISDAIPELK True H1975_Epitope_Rep3 1131.58456169171 1131.5834699358602 45.34 2 0.17877603845251588 0.0006801564359802754 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2'] 40823 21233 HVLDTLIQL True PC9_epitope_Rep1 1050.60734536118 1050.6062499358602 86.497 2 0.17875848722336043 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 10026 18755 AYTPFHAVL True PC9_epitope_Rep5 1017.5283667644899 1017.52726993586 77.153 2 0.17875685020730303 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 76358 9389 NSEPETLEY True H1975_Epitope_Rep3 1080.46113461996 1080.4600299358601 41.115 2 0.17875661790592795 0.0006801564359802754 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 89480 6549 REQLPPTTV True H1975_Epitope_Rep3 1039.5662088251897 1039.5651099358602 30.159 2 0.17875590988879245 0.0006801564359802754 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 29375 13599 FVEPSRQFV True PC9_epitope_Rep2 1107.5712942056298 1107.57018993586 57.597 2 0.17875289631294297 0.0006801564359802754 0.9438714419765777 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 87449 13103 QTENLGVVYY True H1975_Epitope_Rep2 1184.57135377528 1184.5702499358601 55.526 2 0.17873674522659638 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164031|Q8TBM8-2|DNAJB14', 'ENSG00000164031|ENST00000442697|DNAJB14'] 7997 6773 ATDPNILGR True NCI_RA007_Epitope_Rep5 955.50869394907 955.50758993586 32.735 2 0.17872912542169864 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 104733 9371 STDKAEYTFY True H1975_Epitope_Rep3 1223.53463391339 1223.53352993586 41.045 2 0.17872707795971643 0.0006801564359802754 0.9438714419765777 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 52107 17078 KLPSNLPQL True PC9_epitope_Rep1 1008.59678067748 1008.59568993586 70.517 2 0.1787228000179798 0.0006801564359802754 0.9438714419765777 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000504975.1_1_4:76911880-76912009:-|nuORF'] 76545 12830 NTDPSIVMTY True H1975_Epitope_Rep1 1139.51687567427 1139.51637496793 54.417 1 0.17872176265769327 0.0006801564359802754 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 43882 14515 ILDEVIM[Oxidation]GY True H1975_Epitope_Rep2 1067.5208988059899 1067.52037496793 60.99 1 0.1787170101987156 0.0006801564359802754 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 65003 10938 LSDGVAVLK True PC9_epitope_Rep3 900.5280324113199 900.52692993586 47.056 2 0.1787165294613147 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 57931 8358 LEQLTGQTP True H1975_Epitope_Rep2 985.50802524273 985.5074749679301 37.101 1 0.17871268467489074 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 136357 6505 YHDEADQSAL True PC9_epitope_Rep2 1147.47818166643 1147.47708993586 30.435 2 0.17871091106917822 0.0006801564359802754 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 28520 7974 FSHAQTVVL True NCI_RA007_Epitope_Rep3 1000.5341804209199 1000.53308993586 38.467 2 0.1787065536147731 0.0006801564359802754 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 72346 19354 M[Oxidation]TDPIRILV True PC9_epitope_Rep5 1072.5950668057599 1072.59396993586 79.491 2 0.17870464096755995 0.0006801564359802754 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78112818-78113115:-|nuORF'] 37970 7449 HEFLHEVPAA True H1975_Epitope_Rep3 1148.56145779792 1148.56036993586 33.631 2 0.1787039933528224 0.0006801564359802754 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 61327 8436 LLEEDTPRY True H1975_Epitope_Rep2 1134.5557037111398 1134.55460993586 37.4 2 0.17869923712245692 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 3912 13015 AHDDSVMYL True PC9_epitope_Rep6 1049.44879611445 1049.4476899358601 61.643 2 0.17868878363987545 0.0006801564359802754 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 117423 5372 VADPETRTV True PC9_epitope_Rep1 986.50327421546 986.50216993586 25.499 2 0.1786848988987502 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000595792.1_1_19:50369586-50370764:-|nuORF', 'ENST00000594661.5_1_19:50367579-50369988:-|nuORF'] 109218 18620 TFTFSHATF True PC9_epitope_Rep5 1057.4868958753298 1057.48578993586 76.648 2 0.17868447818394098 0.0006801564359802754 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 53383 10318 KVADGFKVV True PC9_epitope_Rep3 961.5596668927699 961.55856993586 44.634 2 0.1786840431489144 0.0006801564359802754 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 138052 20976 YQDPVTLQL True PC9_epitope_Rep1 1075.55497543515 1075.5538699358601 85.509 2 0.1786813854127689 0.0006801564359802754 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 74715 19382 NLLAHFINA True PC9_epitope_Rep4 1011.55016483823 1011.54906993586 82.662 2 0.17868008358120416 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 21340 20069 ERLGQFMTL True PC9_epitope_Rep3 1093.55901526977 1093.5579099358602 82.445 2 0.17867199003936243 0.0006801564359802754 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 85323 15749 QLANEEIAQV True PC9_epitope_Rep5 1113.56660274801 1113.56550993586 65.577 2 0.17865645566323538 0.0006801564359802754 0.9438714419765777 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|5|fusion', 'FGFR3-TACC3|2|fusion', 'FGFR3-TACC3|9|fusion', 'FGFR3-TACC3|14|fusion', 'FGFR3-TACC3|6|fusion', 'FGFR3-TACC3|4|fusion', 'FGFR3-TACC3|1|fusion', 'FGFR3-TACC3|13|fusion', 'FGFR3-TACC3|3|fusion', 'FGFR3-TACC3|15|fusion', 'ENST00000484264.1_1_4:1746256-1746676:+|nuORF', 'ENSG00000013810|ENST00000313288|TACC3'] 65179 15344 LSDVFPGVQY True H1975_Epitope_Rep1 1123.5549754351498 1123.5538699358601 64.289 2 0.1786484539932589 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 84630 13765 QHDPYITSI True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 58.029 2 0.17864674310367065 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 54247 21807 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 88.913 2 0.1786439633439171 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 44920 3111 IQEAGTEVVK True NCI_RA007_Epitope_Rep1 1072.5764391557198 1072.57534993586 15.989 2 0.1786428692448583 0.0006801564359802754 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 27731 14629 FQDPYTRSL True PC9_epitope_Rep5 1125.54547338061 1125.54436993586 61.271 2 0.17864249829067103 0.0006801564359802754 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 2394 11645 AEQIVPLSA True H1975_Epitope_Rep3 926.5072969667399 926.50618993586 49.927 2 0.17864110888970894 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 116760 18574 TYLEKFQNL True PC9_epitope_Rep1 1154.5971746002997 1154.5960699358602 76.232 2 0.17863247027090737 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 38150 5357 HEQSRIITV True H1975_Epitope_Rep2 1081.58800689893 1081.5869099358601 25.651 2 0.17863168496474238 0.0006801564359802754 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 132283 18923 VYLDKFIRL True PC9_epitope_Rep4 1165.68593003505 1165.68427490379 80.874 3 0.1786305572379221 0.0006801564359802754 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 91110 11818 RLMNDMTAV True PC9_epitope_Rep4 1049.49978614149 1049.49868993586 53.226 2 0.17862837277778612 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 74611 7768 NLDSQRLQY True H1975_Epitope_Rep2 1135.56218607391 1135.56108993586 34.827 2 0.17862687157966023 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-7|UEVLD'] 71901 11300 MPQSGTGVSV True PC9_epitope_Rep1 961.45388149489 961.45333496793 48.344 1 0.17862440539737276 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 95001 13184 RYQDIIHSI True PC9_epitope_Rep4 1143.6036569630699 1143.6020249037902 58.609 3 0.17861484102735142 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 90005 14218 RGDLPFVVPR True PC9_epitope_Rep2 1154.6560268890998 1154.65438490379 59.956 3 0.1786141267858033 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 114009 20942 TRLSNIFVI True PC9_epitope_Rep1 1061.62332977849 1061.62222993586 85.374 2 0.17861211181129263 0.0006801564359802754 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF'] 132783 21251 VYSQFITQL True PC9_epitope_Rep5 1097.5757108797297 1097.57460993586 86.792 2 0.17860675266633722 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 29666 11178 FVNDIFER True H1975_Epitope_Rep1 1038.5134449763398 1038.5123499358601 47.966 2 0.17860381468725095 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 76092 13749 NRNAEEFEL True PC9_epitope_Rep1 1120.51490152832 1120.51380993586 57.73 2 0.17860058002745513 0.0006801564359802754 0.9438714419765777 ['ENSG00000138382|ENST00000260953|METTL5'] 22243 10817 ETDNNIVVY True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 46.637 2 0.1785860468243995 0.0006801564359802754 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 5587 12183 ANTFVAELK True PC9_epitope_Rep2 991.5338460677499 991.53274993586 52.174 2 0.17857915710792846 0.0006801564359802754 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 76635 7910 NTIDPSHPM True PC9_epitope_Rep4 1010.4491304676201 1010.44802993586 37.857 2 0.17857808496748767 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 120890 7651 VGDVTGAQAY True H1975_Epitope_Rep2 979.4610750503098 979.45996993586 34.383 2 0.17857155237375633 0.0006801564359802754 0.9438714419765777 ['ENSG00000185201|ENST00000616316|IFITM2', 'ENST00000527146.1_2_11:308871-309162:+|nuORF', 'ENSG00000185885|ENST00000408968|IFITM1', 'ENSG00000142089|ENST00000399808|IFITM3'] 99169 22078 SLAQYLINV True PC9_epitope_Rep2 1019.5651461960299 1019.56404993586 90.395 2 0.1785690306429332 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 40155 7652 HRDYETATL True PC9_epitope_Rep5 1104.51998690876 1104.5188899358602 34.379 2 0.17856450959095804 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 13224 4869 DLTQTASSTAR True H1975_Epitope_Rep3 1149.56257999673 1149.5614899358602 23.855 2 0.17855986727145853 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 12606 5668 DLEAHIDSANK True NCI_RA007_Epitope_Rep2 1211.57823006087 1211.57659490379 26.661 3 0.17854919188372476 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 67566 8083 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.51367496793 36.038 1 0.17854659309764348 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 21418 11181 ERNLQSDVL True PC9_epitope_Rep5 1072.55128703704 1072.55018993586 47.996 2 0.17853830159051054 0.0006801564359802754 0.9438714419765777 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 35656 8006 GTMTGMLYK True NCI_RA007_Epitope_Rep3 1000.47217441132 1000.47106993586 38.587 2 0.17853581536361463 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 39793 20354 HQDSTWIVL True PC9_epitope_Rep1 1097.55055876105 1097.54946993586 83.122 2 0.17853538156030035 0.0006801564359802754 0.9438714419765777 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 2351 7778 AEQEPTAEQLA True H1975_Epitope_Rep1 1185.55134660669 1185.5502499358602 34.872 2 0.17853236906802308 0.0006801564359802754 0.9438714419765777 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'nc|ENSG00000141522|P52565-2|ARHGDIA'] 9251 6307 AVQQPFINK True NCI_RA007_Epitope_Rep5 1043.5763795860698 1043.5752899358602 30.938 2 0.17853156506929904 0.0006801564359802754 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 31659 10466 GEHTLLVTV True NCI_RA007_Epitope_Rep4 967.5338460677499 967.53274993586 47.106 2 0.17852703206012685 0.0006801564359802754 0.9438714419765777 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 83047 20872 PYLDSFYEY True PC9_epitope_Rep4 1195.5073565363898 1195.50624993586 88.44 2 0.17852207745508164 0.0006801564359802754 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 72661 20770 MWSPTHPALF True PC9_epitope_Rep5 1185.5641006502099 1185.56300993586 84.943 2 0.17851567147584216 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 135695 14404 YEIKQFLECA True H1975_Epitope_Rep1 1242.59546034814 1242.5943699358602 60.601 2 0.17850294426785634 0.0006801564359802754 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2'] 37377 10254 GVYGDVQRV True PC9_epitope_Rep3 991.5086939490699 991.50758993586 44.392 2 0.17849759210084382 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'PTBP2|p.A484Rfs*2|2|0.3|ENSG00000117569|chr1:96813062-96813063|-/T|frameshift_variant', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 71912 11250 MPQSGTGVSV True PC9_epitope_Rep5 961.45388149489 961.45278993586 48.263 2 0.1784903622877609 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 54404 11797 KYSEVFEAI True NCI_RA007_Epitope_Rep5 1084.54407639828 1084.5429699358601 52.037 2 0.1784847099369296 0.0006801564359802754 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'ENST00000608490.1_1_20:485716-489204:-|nuORF', 'ENST00000460062.6_1_20:480238-524362:-|nuORF', 'ENST00000609606.5_1_20:480440-489246:-|nuORF', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 130491 12920 VTVSDLQHV True PC9_epitope_Rep2 996.5240096600402 996.52290993586 54.992 2 0.17848462476555546 0.0006801564359802754 0.9438714419765777 ['ENSG00000068489|ENST00000262293|PRR11'] 74084 11372 NHVASDISL True PC9_epitope_Rep3 954.47705946762 954.47596993586 48.745 2 0.1784802563796911 0.0006801564359802754 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 117026 16196 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.52387496793 67.289 1 0.17847339748091542 0.0006801564359802754 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 135814 7133 YEQAARVAI True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 32.37 2 0.17846492217196247 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 61846 21777 LLLDVPTAAV True PC9_epitope_Rep1 1010.6011973515799 1010.60010993586 88.594 2 0.17846489391115686 0.0006801564359802754 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 18021 14451 EIIDLVLDR True NCI_RA007_Epitope_Rep3 1084.61282466444 1084.61172993586 64.15 2 0.1784638969207001 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 54300 16781 KYPSPFFVF True NCI_RA007_Epitope_Rep4 1130.5800679841798 1130.5789699358602 72.732 2 0.17846089711111465 0.0006801564359802754 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 17306 12377 EHDPHVLLAV True PC9_epitope_Rep4 1128.5927579262 1128.59110490379 55.415 3 0.17846050709755437 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 92129 10896 RQADFVQVL True NCI_RA007_Epitope_Rep3 1074.5821932425 1074.58108993586 49.933 2 0.17845750984022976 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 109711 18452 THFLQPIYL True PC9_epitope_Rep6 1130.6124307416198 1130.61132993586 83.617 2 0.17845356491084655 0.0006801564359802754 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 130466 16779 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 69.546 2 0.1784476985014836 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 129897 5140 VTLTSEEEAR True H1975_Epitope_Rep1 1133.5564319871298 1133.55532993586 24.837 2 0.17844363261529245 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 64159 11620 LQFDKAINA True PC9_epitope_Rep6 1018.5447451046199 1018.54364993586 55.819 2 0.17843939239572953 0.0006801564359802754 0.9438714419765777 ['ENSG00000140307|ENST00000396060|GTF2A2'] 38620 18992 HHIYLEGTLL True PC9_epitope_Rep1 1194.6397081186199 1194.6386099358601 77.839 2 0.1784369163773388 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 2527 8286 [Acetylation]-AEQVALSR True H1975_Epitope_Rep1 914.4821451643598 914.48104993586 36.804 2 0.17842428117871575 0.0006801564359802754 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 137179 12972 YLDSIPPGQY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 55.012 2 0.1784231320413377 0.0006801564359802754 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 62218 17475 LLPSRQFGF True PC9_epitope_Rep4 1063.5814649665099 1063.58036993586 75.217 2 0.17841295926325076 0.0006801564359802754 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 86717 11890 QRISEAYESL True PC9_epitope_Rep4 1194.5880664685797 1194.58696993586 53.51 2 0.17841283237966285 0.0006801564359802754 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 108712 3761 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep3 1063.39504666987 1063.39394993586 19.549 2 0.17840778535537505 0.0006801564359802754 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 116777 21160 TYLPAGQSVLL True PC9_epitope_Rep5 1160.64412479272 1160.64302993586 86.445 2 0.17840729915223813 0.0006801564359802754 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'nc|ENSG00000167085|P35232-2|PHB1'] 17820 8060 EIAEAYLGK True H1975_Epitope_Rep3 992.5178616504398 992.51676993586 35.976 2 0.1784038460700458 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 43305 10126 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 44.287 2 0.17840326892402372 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 20667 10429 EQIAEFKEA True PC9_epitope_Rep5 1063.51858992643 1063.51748993586 45.102 2 0.1783981405291484 0.0006801564359802754 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALM1|p.T6I|2|0.38|ENSG00000198668|chr14:90400078-90400078|C/T|missense_variant'] 77238 20300 NYIKDLNIL True PC9_epitope_Rep1 1104.61791004488 1104.6168099358601 82.913 2 0.1783869458482252 0.0006801564359802754 0.9438714419765777 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 96173 13556 SEEFPSFGA True H1975_Epitope_Rep2 969.4079768482899 969.40686993586 57.28 2 0.17838380557457867 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 114233 22086 TRWPGFYIL True PC9_epitope_Rep1 1151.6127650947897 1151.6116699358602 89.765 2 0.17837808047735096 0.0006801564359802754 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'ENST00000587491.5_1_17:75207779-75210102:+|nuORF', 'ENST00000588721.1_1_17:75208810-75210102:+|nuORF'] 89346 8930 REMEENFAV True H1975_Epitope_Rep2 1123.49680893603 1123.49570993586 39.309 2 0.17837542859756614 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 76398 12987 NSLKQLYTV True PC9_epitope_Rep4 1064.5866099165999 1064.58550993586 57.847 2 0.17837467406063673 0.0006801564359802754 0.9438714419765777 ['ENSG00000135372|ENST00000257829|NAT10', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 69970 22728 LYEQAFQLL True PC9_epitope_Rep1 1123.5913609438699 1123.59026993586 92.228 2 0.17837305479455484 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 104855 11300 STEQFQEYY True H1975_Epitope_Rep3 1193.48768372097 1193.4865899358601 48.571 2 0.1783716401615928 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 53709 9514 KYDPNVYSI True NCI_RA007_Epitope_Rep5 1097.53932537101 1097.53822993586 43.23 2 0.17836947992545704 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 76609 18876 NTFTKLITV True PC9_epitope_Rep2 1035.59644632431 1035.5953499358602 77.971 2 0.17836456266063788 0.0006801564359802754 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB'] 139313 6405 YTDM[Oxidation]ESEDY True H1975_Epitope_Rep3 1167.39140075807 1167.3903099358602 29.613 2 0.17836336119696067 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 47628 20498 IYPEVVHMF True PC9_epitope_Rep5 1133.5579526406098 1133.55684993586 83.885 2 0.17835853485546319 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 32907 10552 GINVTDFTR True NCI_RA007_Epitope_Rep2 1021.51925863277 1021.51816993586 45.642 2 0.17835164838389633 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'MYH9|p.L377F|1|0.27|ENSG00000100345|chr22:36318305-36318305|G/A|missense_variant', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 102967 8671 SQIQEFKEA True PC9_epitope_Rep3 1078.5294889632999 1078.52838993586 38.304 2 0.17834665037689493 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 96316 5940 SEEVPGTSP True H1975_Epitope_Rep3 901.4028914678499 901.40234496793 27.857 1 0.17834058637071978 0.0006801564359802754 0.9438714419765777 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 113586 16890 TRAEWMIAA True PC9_epitope_Rep1 1047.5171504577897 1047.51604993586 69.792 2 0.17833180694114956 0.0006801564359802754 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 77574 20130 NYSPYVNYF True PC9_epitope_Rep4 1165.50802524273 1165.50747496793 85.565 1 0.1783288221140314 0.0006801564359802754 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 40587 8257 HTDGNNIYV True PC9_epitope_Rep1 1031.4672230599099 1031.4661299358602 36.595 2 0.17832078680169441 0.0006801564359802754 0.9438714419765777 ['ENSG00000048405|ENST00000265827|ZNF800'] 64205 19640 LQIEDFEARI True PC9_epitope_Rep4 1232.6401020414398 1232.63900993586 83.663 2 0.17831911825478422 0.0006801564359802754 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 33072 12505 GKFEKLIVAL True NCI_RA007_Epitope_Rep4 1116.6906810623198 1116.68958993586 55.116 2 0.178310038870773 0.0006801564359802754 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 139828 5474 YVDGVEVHN True NCI_RA007_Epitope_Rep3 1030.47197408718 1030.47086993586 28.539 2 0.1782946644782172 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 44061 21656 ILLKDILSV True PC9_epitope_Rep3 1012.65323292444 1012.65212993586 88.599 2 0.17828950027359353 0.0006801564359802754 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant', 'ATM|p.Q1116Sfs*10|1|0.39|ENSG00000149311|chr11:108279550-108279550|T/-|frameshift_variant'] 106367 5576 SVSNVVITK True NCI_RA007_Epitope_Rep4 945.54949613189 945.5489449679301 28.048 1 0.17828152097694222 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 109580 9236 THDDSHLVSL True PC9_epitope_Rep2 1122.5305515924601 1122.5289149037899 40.865 3 0.17827396092207967 0.0006801564359802754 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 8368 8687 [Acetylation]-ATNFLAHEK True H1975_Epitope_Rep1 1071.53490901321 1071.53380993586 38.345 2 0.1782632721826559 0.0006801564359802754 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000534232.5_1_8:144663861-144679543:-|nuORF'] 25996 15969 FHDAVQGYASL True PC9_epitope_Rep5 1206.5669371011797 1206.5658499358601 66.414 2 0.17826198926567832 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF'] 14483 5947 DTTVGTLSQR True NCI_RA007_Epitope_Rep2 1076.5462016565998 1076.5451099358602 27.742 2 0.1782593791240314 0.0006801564359802754 0.9438714419765777 ['ENSG00000103035|ENST00000219313|PSMD7'] 42047 10060 IEEDIRDLAA True H1975_Epitope_Rep1 1143.57716743171 1143.57606993586 43.636 2 0.17825648657986906 0.0006801564359802754 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 40129 11867 HRDSGILGL True PC9_epitope_Rep2 966.5246783663799 966.52358993586 50.973 2 0.1782559781228049 0.0006801564359802754 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 42194 6788 IEGEGSVLQAK True NCI_RA007_Epitope_Rep2 1129.59790287629 1129.5968099358602 31.02 2 0.17825465442329427 0.0006801564359802754 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 48800 3091 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 16.291 2 0.178249631050487 0.0006801564359802754 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 54221 17015 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 72.21 2 0.17824950854348823 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 33534 10958 GLIDHQTYL True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 47.114 2 0.17824400868171814 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 35177 12930 GSDEPAFM[Oxidation]YY True H1975_Epitope_Rep2 1194.45394144498 1194.45284993586 54.849 2 0.17824212740840514 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 134933 11704 YAEMGTRTF True PC9_epitope_Rep1 1074.4804305958999 1074.47932993586 49.894 2 0.17824209775018085 0.0006801564359802754 0.9438714419765777 ['ENSG00000102595|ENST00000376747|UGGT2', 'nc|ENSG00000102595|Q9NYU1-2|UGGT2', 'UGGT2|p.W307Lfs*14|1|0.21|ENSG00000102595|chr13:95989983-95989984|CC/A|frameshift_variant', 'ENST00000467305.1_1_13:96637506-96665674:-|nuORF'] 47574 7881 IYNGDMEKI True NCI_RA007_Epitope_Rep3 1081.51139637101 1081.51028993586 38.116 2 0.17823272468285178 0.0006801564359802754 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 27981 16550 FQTEGKLYL True PC9_epitope_Rep3 1097.5757108797297 1097.57460993586 68.799 2 0.17821368861428213 0.0006801564359802754 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENST00000474934.1_1_1:26877949-26879989:+|nuORF', 'ENST00000527264.5_1_1:26873736-26880810:+|nuORF', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 134962 14258 YAFVRPVIL True H1975_Epitope_Rep2 1076.6382515666398 1076.6371499358602 59.993 2 0.17820986885389908 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000161999|Q96S16-2|JMJD8', 'ENSG00000161999|ENST00000609261|JMJD8', 'ENST00000565302.5_1_16:733531-734319:-|nuORF', 'ENST00000569441.5_1_16:733170-733950:-|nuORF', 'ENST00000568689.5_1_16:733170-734340:-|nuORF'] 87076 14334 QSEIASMLY True H1975_Epitope_Rep2 1040.48484727 1040.4842749679299 60.285 1 0.1782075041441673 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 132099 21715 VYILQPEVI True PC9_epitope_Rep3 1072.6168474157198 1072.61574993586 88.82 2 0.17820468441827148 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 83246 15557 QADLINELY True H1975_Epitope_Rep2 1077.53423999057 1077.53367496793 64.996 1 0.17820355415652236 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 29708 19009 FVPEIFHRI True PC9_epitope_Rep1 1156.6393141958 1156.63765490379 77.906 3 0.17820141784374294 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 105726 9369 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 46.23 2 0.17819654908269442 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 74081 11229 NHVASDISL True PC9_epitope_Rep1 954.47705946762 954.47596993586 48.072 2 0.17819285302946417 0.0006801564359802754 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 83026 10919 PYKVTQDEL True PC9_epitope_Rep5 1091.54989005471 1091.5487899358602 46.989 2 0.17818276744061248 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 140616 13875 YYNKVSTVF True PC9_epitope_Rep2 1119.5600608155898 1119.5589699358602 58.652 2 0.17817959461955352 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 9008 16406 AVIDVGINRV True PC9_epitope_Rep3 1054.61349337078 1054.6123899358602 68.243 2 0.1781726887025362 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 43523 20193 IIDGKIFCV True PC9_epitope_Rep3 1006.5521389841799 1006.55104993586 82.931 2 0.17816603480113852 0.0006801564359802754 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 75822 18403 NRDEMLVVL True PC9_epitope_Rep4 1087.5695799534699 1087.56848993586 78.854 2 0.17816567708355951 0.0006801564359802754 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 89196 11439 REIFFPETA True H1975_Epitope_Rep1 1108.5553097883198 1108.5542099358602 48.98 2 0.1781600535241122 0.0006801564359802754 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 9830 18132 AYLKGTVLF True PC9_epitope_Rep4 1010.5800679841799 1010.57896993586 77.809 2 0.17814695217326498 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 35774 5747 GTVIHFNNPK True NCI_RA007_Epitope_Rep4 1125.59309227937 1125.59143490379 28.725 3 0.17814348279145079 0.0006801564359802754 0.9438714419765777 ['RGNEF-BTF3|1|fusion', 'nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 96393 15705 SEHWLVLVP True NCI_RA007_Epitope_Rep4 1078.5811306133398 1078.58002993586 68.21 2 0.17813502407715986 0.0006801564359802754 0.9438714419765777 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 9759 17740 AYLEAIHNF True PC9_epitope_Rep2 1076.52909504048 1076.5279899358602 73.519 2 0.1781217471411709 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 44240 14812 ILTDITKGV True PC9_epitope_Rep2 958.5698972233 958.56880993586 62.239 2 0.1781124050616566 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 7145 10727 AQYLINARL True NCI_RA007_Epitope_Rep3 1060.60292868708 1060.60182993586 49.24 2 0.17811193326515312 0.0006801564359802754 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 83747 11529 QEDFFQRVP True H1975_Epitope_Rep2 1164.55637241748 1164.55526993586 49.406 2 0.17811009718433585 0.0006801564359802754 0.9438714419765777 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF'] 104773 7324 STDPEALHY True H1975_Epitope_Rep2 1031.45598966987 1031.4554749679298 33.113 1 0.17810725011675776 0.0006801564359802754 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 86845 14509 QRQDIAFAY True PC9_epitope_Rep5 1110.5458077337798 1110.54470993586 60.809 2 0.17807982821409793 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 103627 12962 SRDKTIIMW True PC9_epitope_Rep6 1148.60121443492 1148.59957490379 61.414 3 0.17807913503828662 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 100145 21264 SLLDPVPEV True PC9_epitope_Rep2 967.52261267771 967.52150993586 87.252 2 0.17807425076770844 0.0006801564359802754 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 84103 6012 QEQGELQGRLA True H1975_Epitope_Rep2 1227.6207635791898 1227.6196699358602 28.104 2 0.1780652538949481 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130787|O75146-2|HIP1R', 'ENST00000452196.6_1_12:123320097-123341792:+|nuORF', 'ENST00000535831.5_1_12:123319379-123341792:+|nuORF', 'ENSG00000130787|ENST00000253083|HIP1R'] 75956 19682 NRGDFFMTL True PC9_epitope_Rep4 1099.51206507735 1099.5109699358602 83.827 2 0.17806511402836817 0.0006801564359802754 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000380393.7_1_20:2844875-2903853:+|nuORF'] 138743 6526 YSAPQHDYY True H1975_Epitope_Rep3 1142.46688870674 1142.4657899358601 30.069 2 0.17806368921052157 0.0006801564359802754 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 104367 20235 SSFPRFYFV True PC9_epitope_Rep4 1148.5654805492 1148.5643899358602 85.975 2 0.17805202932176623 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 126998 13058 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 55.234 2 0.17805086198968995 0.0006801564359802754 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 37878 6734 HEAEYYVAA True H1975_Epitope_Rep2 1051.46107505031 1051.45996993586 30.817 2 0.17804723683404095 0.0006801564359802754 0.9438714419765777 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD', 'ENST00000482824.1_1_3:15676934-15683645:+|nuORF'] 94697 6069 RYLENGKETL True PC9_epitope_Rep4 1221.6353510141698 1221.6337049037902 30.344 3 0.17804397557272836 0.0006801564359802754 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 75813 18347 NRDELELEL True PC9_epitope_Rep2 1129.5615173675699 1129.5604299358602 75.903 2 0.1780401254121451 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 54413 7848 KYSLIKGNF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 36.885 2 0.17803930021279862 0.0006801564359802754 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 9647 9818 AYGKDFHLI True NCI_RA007_Epitope_Rep4 1062.5498304850598 1062.5487299358601 44.614 2 0.17802503042481196 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198160|Q8N108-19|MIER1', 'nc|ENSG00000198160|Q8N108-16|MIER1', 'nc|ENSG00000198160|Q8N108-14|MIER1', 'nc|ENSG00000198160|Q8N108-18|MIER1', 'nc|ENSG00000198160|Q8N108-17|MIER1', 'nc|ENSG00000198160|Q8N108-15|MIER1', 'nc|ENSG00000198160|Q8N108|MIER1', 'nc|ENSG00000198160|Q8N108-13|MIER1', 'ENSG00000198160|ENST00000401041|MIER1'] 74587 13393 NLDPLTETY True H1975_Epitope_Rep1 1064.50260550912 1064.50207496793 56.626 1 0.1780219399914585 0.0006801564359802754 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 108422 8410 TEEEQIAYA True H1975_Epitope_Rep3 1052.4662200003997 1052.4651299358602 37.333 2 0.17801952285212486 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 140388 11987 YYEYNHDLF True NCI_RA007_Epitope_Rep4 1262.5244035828598 1262.5233099358602 53.113 2 0.17800892763707918 0.0006801564359802754 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 45225 8424 IRLENEIQT True H1975_Epitope_Rep2 1114.59823722946 1114.5971499358602 37.354 2 0.17800773405561454 0.0006801564359802754 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 26139 12695 FHLSSQSSL True PC9_epitope_Rep1 1004.49270953176 1004.49160993586 53.703 2 0.1780038406577138 0.0006801564359802754 0.9438714419765777 ['SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion', 'nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 28060 15733 FRDHLEEVL True PC9_epitope_Rep1 1156.58767254576 1156.58602490379 65.34 3 0.17799889529021248 0.0006801564359802754 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 15090 8509 EADEYLDKY True H1975_Epitope_Rep1 1144.49243474824 1144.4913299358602 37.66 2 0.17799634620928964 0.0006801564359802754 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 107006 19876 SYLKEFIHI True PC9_epitope_Rep5 1148.62299542532 1148.6213549037902 81.505 3 0.1779947151180085 0.0006801564359802754 0.9438714419765777 ['ENSG00000131966|ENST00000254286|ACTR10', 'ENST00000556312.5_1_14:58666935-58675849:+|nuORF', 'ENST00000556748.5_1_14:58666901-58681958:+|nuORF'] 71147 4069 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 20.736 2 0.17799406788905722 0.0006801564359802754 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 63987 20461 LQAPPLTSL True PC9_epitope_Rep1 938.5436824754601 938.54258993586 83.515 2 0.17799243498990608 0.0006801564359802754 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 9752 11490 AYLEAIHNF True NCI_RA007_Epitope_Rep3 1076.52909504048 1076.5279899358602 52.309 2 0.1779899379494002 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 22142 8741 ESYSVYVYK True H1975_Epitope_Rep3 1136.5389910178399 1136.5378899358602 38.627 2 0.17798507754625756 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 1081 4934 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.3913849679301 24.061 1 0.17797531900867933 0.0006801564359802754 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 96772 8574 SEQPTLVTA True H1975_Epitope_Rep3 944.4814761417199 944.48092496793 37.97 1 0.1779748354832894 0.0006801564359802754 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 114204 20351 TRVDTILEF True PC9_epitope_Rep1 1092.5815245361598 1092.5804299358601 83.11 2 0.17797132901634594 0.0006801564359802754 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 44751 17179 IPRVPSLSV True PC9_epitope_Rep2 966.5862159937799 966.58510993586 71.338 2 0.1779666018685576 0.0006801564359802754 0.9438714419765777 ['ENSG00000152464|ENST00000378197|RPP38'] 21332 15243 ERLGQFM[Oxidation]TL True PC9_epitope_Rep2 1109.55393026977 1109.55282993586 63.902 2 0.17796212779255052 0.0006801564359802754 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 102920 17473 SQIHDIVLV True PC9_epitope_Rep3 1022.5760452328999 1022.57494993586 72.388 2 0.1779619348322428 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 72121 15854 MRDSLSQVL True PC9_epitope_Rep5 1047.53827982519 1047.5371899358602 65.973 2 0.17795968700187273 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000188428|Q8TDH9-2|BLOC1S5', 'nc|ENSG00000188428|Q8TDH9-3|BLOC1S5', 'ENSG00000188428|ENST00000397457|BLOC1S5'] 1875 6948 AEIHVPEEQA True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 31.645 2 0.17795728656567839 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C'] 105524 10887 SVDGVIKEV True PC9_epitope_Rep6 944.51786165044 944.51676993586 52.739 2 0.17794290602570248 0.0006801564359802754 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 72383 9633 MTEEEQIAY True H1975_Epitope_Rep3 1112.4695911286797 1112.4690749679298 42.069 1 0.17794227533334772 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 104166 8097 SSATTSPFFK True NCI_RA007_Epitope_Rep3 1071.52367530687 1071.52256993586 38.948 2 0.1779323764018187 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB'] 14394 10230 DTFLEDVK True H1975_Epitope_Rep1 965.4705771048499 965.46948993586 44.294 2 0.17792526457131128 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 28876 9624 FTDVIGHY True H1975_Epitope_Rep1 950.4497820906199 950.44868993586 41.945 2 0.17791221778306818 0.0006801564359802754 0.9438714419765777 ['ENSG00000090432|ENST00000264198|MUL1'] 6714 17305 AQDEHLITF True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 71.739 2 0.17790921128265316 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 42146 7019 IEESGEHIIA True H1975_Epitope_Rep3 1096.540053647 1096.53894993586 31.961 2 0.1779039043649016 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 116790 15460 TYLPTSPLL True NCI_RA007_Epitope_Rep3 1003.55899818643 1003.55790993586 68.368 2 0.17789592962895528 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 132324 16493 VYLPNINKI True PC9_epitope_Rep6 1072.62808080576 1072.6269899358601 75.867 2 0.17788663289699164 0.0006801564359802754 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 8817 19858 AVFPHLTVV True PC9_epitope_Rep5 981.5647522732099 981.56364993586 81.433 2 0.17788090173516 0.0006801564359802754 0.9438714419765777 ['ENSG00000134825|ENST00000537328|TMEM258'] 104319 11025 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep1 1170.4539414449798 1170.45284993586 47.368 2 0.17786880575477676 0.0006801564359802754 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 135609 8964 YEEMGIKPP True H1975_Epitope_Rep2 1062.5055827145798 1062.5044899358602 39.434 2 0.17786734737632898 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 9042 18905 AVIKGLTYL True PC9_epitope_Rep5 976.5957180483199 976.59462993586 77.74 2 0.1778659426191154 0.0006801564359802754 0.9438714419765777 ['ENST00000425818.2_1_15:66679685-66737158:+|nuORF', 'ENSG00000169032|ENST00000307102|MAP2K1'] 115151 22948 TVADVVLWSV True PC9_epitope_Rep3 1087.59136094387 1087.59026993586 93.535 2 0.17786483119620197 0.0006801564359802754 0.9438714419765777 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 84533 10143 QHADPPVQI True PC9_epitope_Rep3 1003.50869394907 1003.50758993586 43.968 2 0.17786112005760313 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 28399 16046 FSDVMEDLY True H1975_Epitope_Rep1 1117.4637774722498 1117.46268993586 67.059 2 0.17785950943767917 0.0006801564359802754 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 114875 6018 TTDSSYGQNY True H1975_Epitope_Rep2 1134.4465471849799 1134.44544993586 28.126 2 0.17785372545964373 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 35424 11659 GTDMEPSLY True H1975_Epitope_Rep2 1011.42191266027 1011.4213749679301 49.918 1 0.17785320213599007 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 67263 12685 LTDLYSPEY True H1975_Epitope_Rep3 1099.50735653639 1099.50624993586 54.003 2 0.17784782449184905 0.0006801564359802754 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 76032 16577 NRLDAELQL True PC9_epitope_Rep2 1070.57202248162 1070.57092993586 69.001 2 0.1778416253517498 0.0006801564359802754 0.9438714419765777 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'KIF13A-CCHCR1|1|fusion', 'ENST00000467553.2_1_6:31112829-31113051:-|nuORF'] 26189 9862 FHSGDDSQVL True PC9_epitope_Rep5 1103.48835242731 1103.48724993586 42.904 2 0.17783970295947824 0.0006801564359802754 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3'] 62609 19597 LLVKELQSL True PC9_epitope_Rep5 1041.64339651673 1041.6422899358602 80.432 2 0.1778272397935919 0.0006801564359802754 0.9438714419765777 ['ENST00000586271.1_1_17:76120592-76121921:-|nuORF', 'ENST00000589553.5_1_17:76120816-76124832:-|nuORF', 'nc|ENSG00000141524|Q7Z403-2|TMC6', 'ENST00000588087.5_1_17:76116732-76122925:-|nuORF', 'ENSG00000141524|ENST00000590602|TMC6'] 26217 12456 FHVEPGLQRL True PC9_epitope_Rep4 1194.6509415086598 1194.6493049037902 55.719 3 0.1778178308500644 0.0006801564359802754 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 102910 16185 SQIEADFRL True PC9_epitope_Rep6 1077.54547338061 1077.54436993586 74.61 2 0.17781469743854658 0.0006801564359802754 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 135542 6108 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 28.563 2 0.17781454622871834 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 11053 8059 DDNM[Oxidation]FQIGK True NCI_RA007_Epitope_Rep2 1082.47026021546 1082.46916993586 35.98 2 0.1778142515409455 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 54146 15411 KYNANFVTF True PC9_epitope_Rep6 1102.54474510462 1102.54364993586 71.435 2 0.17781277076235227 0.0006801564359802754 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 75929 13736 NREDSMNIL True PC9_epitope_Rep5 1090.5077079729 1090.50660993586 57.858 2 0.17780619120725683 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 35642 13567 GTMEWIMIK True NCI_RA007_Epitope_Rep3 1107.54567370475 1107.5445699358602 60.661 2 0.1778046894678063 0.0006801564359802754 0.9438714419765777 ['ENSG00000168273|ENST00000477703|UQCC5'] 44243 13269 ILTDITKGV True PC9_epitope_Rep6 958.5698972233 958.56880993586 62.69 2 0.17780215427043544 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 113200 8974 TQDPTVTRL True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 39.465 2 0.17779966863584598 0.0006801564359802754 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 1042 5476 AEAIHSPQV True H1975_Epitope_Rep2 950.4821448480601 950.48104993586 26.083 2 0.17779752823930742 0.0006801564359802754 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.G2160D|1|0.36|ENSG00000047410|chr1:186320401-186320401|C/T|missense_variant'] 38883 18442 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 75.958 2 0.1777966867668955 0.0006801564359802754 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 34732 5492 GQNPTNAEVLK True NCI_RA007_Epitope_Rep1 1169.6040508858898 1169.6029499358601 25.434 2 0.17778676148070824 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 102919 17386 SQIHDIVLV True PC9_epitope_Rep3 1022.5760452328999 1022.57494993586 72.045 2 0.17778508336678792 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 59823 19256 LHDISSLL True PC9_epitope_Rep5 896.49673228304 896.49562993586 79.109 2 0.1777845362612904 0.0006801564359802754 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 104623 10684 SSVPGVRLLQ True NCI_RA007_Epitope_Rep1 1054.61349337078 1054.6123899358602 45.549 2 0.17778099126348665 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 105100 18981 STLHLVLRL True PC9_epitope_Rep5 1050.65496425994 1050.65386993586 78.036 2 0.1777775233272801 0.0006801564359802754 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 73950 19450 NHLREIWEL True PC9_epitope_Rep5 1208.6302060640799 1208.62855490379 79.865 3 0.1777724751648526 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1', 'chr15:90981981-90984693|492|12.32|0.7|4.14|-|ENST00000557905|PRC1,PRC1', 'ENST00000557763.5_1_15:91524929-91537713:-|nuORF', 'PRC1|p.E226Kfs*52|1|0.16|ENSG00000198901|chr15:90981030-90981030|C/-|frameshift_variant', 'ENST00000555791.5_1_15:91527220-91537794:-|nuORF'] 137170 15290 YLDQMEDLY True H1975_Epitope_Rep2 1188.50089125696 1188.49978993586 63.971 2 0.17776981729623142 0.0006801564359802754 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3'] 33039 6363 GKAKTIIQL True NCI_RA007_Epitope_Rep3 970.6175161220599 970.61640993586 32.03 2 0.17776871177251372 0.0006801564359802754 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 89771 11112 RFDEILEASD True H1975_Epitope_Rep1 1193.5564319871298 1193.55532993586 47.708 2 0.17776811985891203 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM'] 63959 7324 LQAEIDNIK True H1975_Epitope_Rep3 1042.56587447202 1042.56476993586 33.146 2 0.17775620424760516 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 131805 8988 VYANGIRNI True PC9_epitope_Rep6 1018.5559784946599 1018.55488993586 44.594 2 0.17775547801432906 0.0006801564359802754 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 47351 10476 IYHNPTANSF True PC9_epitope_Rep5 1162.54072235334 1162.5396299358601 45.283 2 0.17775511839143557 0.0006801564359802754 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 3887 10237 AHDDGRWSL True PC9_epitope_Rep5 1055.47845644995 1055.47734993586 44.363 2 0.17775019452643084 0.0006801564359802754 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 137176 12316 YLDSIPPGQY True H1975_Epitope_Rep2 1151.54989005471 1151.5487899358602 52.457 2 0.17774949630238787 0.0006801564359802754 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 54102 20327 KYMDVQFDF True PC9_epitope_Rep2 1191.52704643515 1191.5259499358601 83.61 2 0.17774511861799733 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 39802 5461 HQEGEIFDTEK True NCI_RA007_Epitope_Rep5 1331.5993594282697 1331.5982699358601 27.693 2 0.17774351835250288 0.0006801564359802754 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 70269 13728 LYNPKITSEL True PC9_epitope_Rep6 1176.63903941228 1176.6379499358602 64.593 2 0.17773632586780327 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 109863 12411 THMPSVVGV True PC9_epitope_Rep2 925.4691376362099 925.46804993586 53.046 2 0.17772566774274598 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 8628 8124 AVALPLQTK True NCI_RA007_Epitope_Rep5 939.57531695691 939.57420993586 37.934 2 0.1777192381388816 0.0006801564359802754 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 4154 19760 AHWQFETAL True PC9_epitope_Rep3 1101.5243440132099 1101.5232499358601 81.236 2 0.17770725993448297 0.0006801564359802754 0.9438714419765777 ['ENSG00000185262|ENST00000327490|UBALD2', 'ENSG00000153443|ENST00000283474|UBALD1'] 26206 9712 FHTTPNTSL True PC9_epitope_Rep3 1016.49270953176 1016.49160993586 42.312 2 0.17770154054280962 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 88425 22542 QYSPLLAAF True PC9_epitope_Rep1 1008.5280324113198 1008.5274749679301 91.51 1 0.17769885893560416 0.0006801564359802754 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 95007 13444 RYQFLEEAF True NCI_RA007_Epitope_Rep5 1201.57677350889 1201.57566993586 58.398 2 0.1776984151939197 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 71937 19159 MPTLPPPSV True PC9_epitope_Rep1 937.49428975489 937.49318993586 78.489 2 0.17769709528354044 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 59913 20263 LHIGSVITL True PC9_epitope_Rep5 951.5753169569101 951.57420993586 82.992 2 0.17768809636645339 0.0006801564359802754 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 17524 12565 EHINEGETAML True PC9_epitope_Rep5 1242.55505208814 1242.5539499358601 53.332 2 0.1776869638424099 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 115919 15166 TVPKPDVVVQV True PC9_epitope_Rep5 1179.68632395787 1179.6852299358602 63.344 2 0.17768588331530563 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 102803 22388 SQFLGYPITL True PC9_epitope_Rep3 1137.60701100801 1137.6059099358602 91.393 2 0.17768424806762903 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 55436 15579 LATRALPEL True PC9_epitope_Rep3 982.5811306133398 982.58002993586 65.073 2 0.1776839770468734 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 7553 17198 ASFNDTFVHV True PC9_epitope_Rep4 1135.5298233164701 1135.5287299358602 74.158 2 0.17767954404068215 0.0006801564359802754 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 38934 18707 HIPDVITYL True PC9_epitope_Rep6 1069.58079626017 1069.5796899358602 84.6 2 0.17767944066492494 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 136175 20422 YGIPAIVKL True PC9_epitope_Rep1 972.60080342876 972.59970993586 83.367 2 0.17767103877808627 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 132998 10670 VYVKDLSSF True NCI_RA007_Epitope_Rep3 1056.54916177872 1056.5480699358602 49.017 2 0.1776663232536001 0.0006801564359802754 0.9438714419765777 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 113508 11105 TQTAVITRI True PC9_epitope_Rep1 1001.5869442697699 1001.58584993586 47.601 2 0.17766604465649397 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 37457 18496 GYADIVQLL True NCI_RA007_Epitope_Rep3 990.5385970950199 990.53750993586 80.938 2 0.17766477576068904 0.0006801564359802754 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 105699 14898 SVHGDFLNV True PC9_epitope_Rep2 986.48214484806 986.48104993586 62.571 2 0.17765787748107786 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 32114 7023 GEYISKDGVP True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 31.939 2 0.17765592558392318 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3', 'ABLIM3|p.Q205Pfs*5|1|0.33|ENSG00000173210|chr5:149210760-149210761|-/C|frameshift_variant'] 89103 4781 REFDRRFSP True NCI_RA007_Epitope_Rep3 1208.6050539453997 1208.60341490379 25.769 3 0.17765030091533784 0.0006801564359802754 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 94715 12067 RYLEQLHQL True PC9_epitope_Rep2 1198.64585612822 1198.64474993586 51.729 2 0.17765019891172745 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 112715 7990 TPHLQGETV True PC9_epitope_Rep5 980.4927095317599 980.49160993586 35.672 2 0.177635564844657 0.0006801564359802754 0.9438714419765777 ['ZNF646|p.G1377Dfs*34|1|0.16|ENSG00000167395|chr16:31080451-31080451|G/-|frameshift_variant', 'nc|ENSG00000167395|O15015-1|ZNF646', 'ENSG00000167395|ENST00000300850|ZNF646'] 132369 10444 VYMELSQKL True NCI_RA007_Epitope_Rep3 1109.57908200801 1109.5779899358602 48.146 2 0.1776315305925439 0.0006801564359802754 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 21851 10422 ESEDPDYYQY True H1975_Epitope_Rep2 1307.48299226335 1307.4824749679299 45.101 1 0.17762535337408916 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 120018 20234 VFDPKVFTF True PC9_epitope_Rep4 1098.57498260374 1098.57388993586 85.972 2 0.17762442871447906 0.0006801564359802754 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 136917 11631 YKDGTELEL True PC9_epitope_Rep6 1066.51825557326 1066.51714993586 55.861 2 0.1776235415018439 0.0006801564359802754 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 136202 19530 YGLPVVVKL True PC9_epitope_Rep4 986.6164534929 986.6159049679301 83.243 1 0.1776152350078609 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 3976 14474 AHESAVTGLSL True PC9_epitope_Rep5 1083.55603806431 1083.5549499358601 60.674 2 0.17761401053430406 0.0006801564359802754 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 41197 10431 IAAPFTSKL True H1975_Epitope_Rep3 946.5487678559 946.54766993586 45.182 2 0.1776135611305062 0.0006801564359802754 0.9438714419765777 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19758004-19758388:-|nuORF'] 91157 18673 RLPETLPSL True PC9_epitope_Rep5 1024.59169529704 1024.5905899358602 76.846 2 0.1776017790369227 0.0006801564359802754 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 35854 17403 GVAANDVIVHI True PC9_epitope_Rep5 1106.6084079903399 1106.60730993586 71.941 2 0.1775956505320084 0.0006801564359802754 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 84059 9088 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 39.909 2 0.17759297016219386 0.0006801564359802754 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 103509 18161 SRDAAWYQL True PC9_epitope_Rep1 1108.53015766964 1108.5290699358602 74.647 2 0.1775921876435921 0.0006801564359802754 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 89071 9433 REELSNVLAA True H1975_Epitope_Rep3 1100.5825871653199 1100.5814899358602 41.286 2 0.1775921409421786 0.0006801564359802754 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 34969 5462 GQYGNPLNK True NCI_RA007_Epitope_Rep4 989.4930438849299 989.49194993586 27.592 2 0.1775908467059153 0.0006801564359802754 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 94377 19794 RYDPFSNTW True PC9_epitope_Rep3 1184.5250722892 1184.5239699358601 81.369 2 0.1775837920361088 0.0006801564359802754 0.9438714419765777 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 90339 17004 RIIDVVYNA True PC9_epitope_Rep1 1061.58694426977 1061.58584993586 70.228 2 0.17758374714547095 0.0006801564359802754 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 25906 20277 FGLARAFGV True PC9_epitope_Rep1 936.5181364339599 936.51702993586 82.823 2 0.17757819778547718 0.0006801564359802754 0.9438714419765777 ['ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'ENST00000554619.5_1_12:56361683-56363594:+|nuORF', 'ENST00000556656.5_1_12:56361683-56365109:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2'] 56453 7997 LDSSAVLDTGK True NCI_RA007_Epitope_Rep1 1104.56626839484 1104.56516993586 35.1 2 0.17757375757240587 0.0006801564359802754 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC'] 71304 19904 MHDFNLISI True PC9_epitope_Rep4 1088.53246616876 1088.53136993586 84.695 2 0.17757005269197942 0.0006801564359802754 0.9438714419765777 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 52672 14294 KQFGNILIL True NCI_RA007_Epitope_Rep5 1044.6331661861998 1044.63206993586 61.674 2 0.17756971472988173 0.0006801564359802754 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'SMS|p.G166W|1|0.32|ENSG00000102172|chrX:21977227-21977227|G/T|missense_variant', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 134921 7864 YADYSGQQSTY True H1975_Epitope_Rep2 1281.51496109797 1281.5138699358602 35.195 2 0.17756183175972653 0.0006801564359802754 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL'] 104889 6368 STFDTQITK True NCI_RA007_Epitope_Rep5 1039.51858992643 1039.51748993586 31.169 2 0.17755449417459657 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 85351 15662 QLDMQSSWVY True H1975_Epitope_Rep2 1255.5543238121502 1255.5532299358601 65.401 2 0.17754408138086453 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14'] 31680 6035 GEIESKFNQA True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 28.191 2 0.17753830436448545 0.0006801564359802754 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 69860 17296 LYANM[Oxidation]FERL True PC9_epitope_Rep3 1171.56958033391 1171.56848993586 71.702 2 0.17752832451310316 0.0006801564359802754 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 86685 15239 QRIDEFEAL True PC9_epitope_Rep6 1119.5560380643099 1119.5549499358601 70.725 2 0.17752164643087104 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 37538 21054 GYMEGYYTF True PC9_epitope_Rep2 1129.44264810485 1129.4415499358602 86.438 2 0.17752145562458552 0.0006801564359802754 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 11652 14493 DHDGNIVEL True PC9_epitope_Rep2 1010.46688870674 1010.46578993586 61.017 2 0.1775203875050028 0.0006801564359802754 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 86679 17846 QRIDEFEAL True PC9_epitope_Rep3 1119.5560380643099 1119.5549499358601 73.84 2 0.17752026723702422 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 5487 11747 AMLDTVVFK True NCI_RA007_Epitope_Rep3 1022.54705360374 1022.54594993586 53.318 2 0.17751914186795117 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 21053 6746 ERDM[Oxidation]SNVSL True PC9_epitope_Rep1 1065.47607387189 1065.4749699358601 30.754 2 0.17751508332383162 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 118997 16435 VEFLEPLEA True H1975_Epitope_Rep3 1045.5331773614098 1045.53208993586 68.701 2 0.1775053769576458 0.0006801564359802754 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 7500 7296 ASEFPGAQHY True H1975_Epitope_Rep2 1105.48287312405 1105.48176993586 33.002 2 0.17750441534792236 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 65312 10177 LSELEAALQR True H1975_Epitope_Rep1 1128.6138872935999 1128.61278993586 44.085 2 0.17750072642817818 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 91367 5338 RMQKEITAL True NCI_RA007_Epitope_Rep5 1088.60121443492 1088.60010993586 27.224 2 0.1775002757642357 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ACTG2|p.D312N|1|0.1|ENSG00000163017|chr2:73916712-73916712|G/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 67234 11868 LTDLVDDNY True H1975_Epitope_Rep3 1066.48187006454 1066.48076993586 50.8 2 0.1774976410130527 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 90946 8733 RLFVGSIPK True NCI_RA007_Epitope_Rep2 1015.6178504752298 1015.61674993586 38.615 2 0.1774880385891261 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 42225 4581 IEHDVVMKA True H1975_Epitope_Rep2 1040.5324661687598 1040.53136993586 22.725 2 0.17748403365147855 0.0006801564359802754 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 104859 15034 STEQIPILY True H1975_Epitope_Rep1 1062.5597264624198 1062.5586299358602 63.077 2 0.1774774482086982 0.0006801564359802754 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 107323 18099 SYRELFEFF True NCI_RA007_Epitope_Rep4 1236.5815245361598 1236.5804299358601 78.315 2 0.17747578662468236 0.0006801564359802754 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 116004 7411 TVQTTEDQILK True NCI_RA007_Epitope_Rep3 1274.67179609254 1274.67068993586 36.275 2 0.17747042760604342 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion', 'ENST00000478896.2_1_10:75757878-75863603:+|nuORF', 'VCL-ADK|10|fusion', 'VCL-ADK|12|fusion', 'VCL-ADK|9|fusion', 'VCL-ADK|11|fusion', 'VCL-ADK|3|fusion'] 9983 11945 AYSRVQYQF True PC9_epitope_Rep4 1160.5614577979202 1160.56036993586 53.735 2 0.17746941599707503 0.0006801564359802754 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 26704 7692 FLDESRSTQY True H1975_Epitope_Rep1 1244.567331024 1244.56622993586 34.551 2 0.17746076058126709 0.0006801564359802754 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 34514 6534 GQDVGRYQV True PC9_epitope_Rep6 1020.49885754136 1020.49776993586 33.807 2 0.17746062418230754 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 46755 4787 IVAVTGAEAQK True H1975_Epitope_Rep3 1085.6080736371698 1085.6069699358602 23.539 2 0.17745734210931777 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'ENST00000569825.1_1_16:70287541-70292096:-|nuORF'] 140121 20221 YVQDFLNHL True PC9_epitope_Rep2 1147.56620882519 1147.5651099358602 83.198 2 0.1774566136915642 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 118230 12154 VAYPGIPKL True H1975_Epitope_Rep2 956.5695033004799 956.56840993586 51.835 2 0.17745464748761405 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 132975 19822 VYVDLGGSHVF True PC9_epitope_Rep1 1191.5924235730301 1191.5913299358601 81.059 2 0.17745038579233804 0.0006801564359802754 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 65263 8573 LSEGVTISYK True NCI_RA007_Epitope_Rep2 1095.58119018299 1095.58008993586 37.992 2 0.17744640290827754 0.0006801564359802754 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 124678 20533 VLIPKLPQL True PC9_epitope_Rep2 1019.6743027221899 1019.67320993586 84.412 2 0.1774460061728669 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 132284 18936 VYLDKFIRL True PC9_epitope_Rep4 1165.68593003505 1165.68482993586 80.925 2 0.17744447754559 0.0006801564359802754 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 28586 18284 FSPAGPILSIR True PC9_epitope_Rep4 1156.6604435632 1156.65934993586 78.4 2 0.17744226730736753 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 28177 19809 FRNIPGITL True PC9_epitope_Rep5 1029.5971150306498 1029.5960099358601 81.243 2 0.17743829136589034 0.0006801564359802754 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 140097 12138 YVPETVYRV True PC9_epitope_Rep6 1124.5866099165999 1124.58550993586 58.038 2 0.17743753611691757 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 70490 13451 LYSRVQATF True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 56.755 2 0.17743477642251815 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103264|Q5XUX0-2|FBXO31', 'ENSG00000103264|ENST00000311635|FBXO31'] 133333 7825 WESPSPPKP True H1975_Epitope_Rep2 1023.5025459394699 1023.50144993586 35.048 2 0.17743240197754756 0.0006801564359802754 0.9438714419765777 ['ENST00000514882.5_1_5:10683562-10761180:-|nuORF', 'ENSG00000112977|ENST00000230895|DAP'] 94721 11443 RYLEQLHQL True PC9_epitope_Rep4 1198.64585612822 1198.64474993586 51.784 2 0.1774267027652893 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 127246 19548 VQIPFFAKL True PC9_epitope_Rep6 1061.62735252977 1061.6262499358602 87.855 2 0.17742402691459275 0.0006801564359802754 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD'] 106882 17654 SYIELPAYL True NCI_RA007_Epitope_Rep3 1067.55391280599 1067.55280993586 77.412 2 0.17742358110081555 0.0006801564359802754 0.9438714419765777 ['ENSG00000162511|ENST00000294507|LAPTM5'] 21370 19289 ERLSYTQLL True PC9_epitope_Rep5 1121.6080736371698 1121.6069699358602 79.238 2 0.17742240889021832 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 124361 17131 VLDSVDVRL True PC9_epitope_Rep2 1014.57095985246 1014.56986993586 71.143 2 0.1774171630766976 0.0006801564359802754 0.9438714419765777 ['ENSG00000169105|ENST00000306243|CHST14'] 113790 15125 TRDSLPVSL True PC9_epitope_Rep2 986.53965972418 986.53856993586 63.438 2 0.17741375729044664 0.0006801564359802754 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 103518 11997 SRDDNM[Oxidation]FQI True PC9_epitope_Rep2 1140.48697290876 1140.4858699358601 51.464 2 0.1774125841993899 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 2370 10106 AEQFKLIQA True H1975_Epitope_Rep3 1046.5760452329 1046.57494993586 43.914 2 0.17740151190172243 0.0006801564359802754 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 103424 22984 SQYPEIIFL True PC9_epitope_Rep2 1108.580461907 1108.57987496793 93.903 1 0.17740122613817916 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 135570 6457 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 29.811 2 0.17739414727687755 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 101721 22249 SPGTALILLEA True PC9_epitope_Rep1 1083.61757569171 1083.61646993586 90.398 2 0.17738650665480005 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 47971 3951 KAFNQGKIFK True NCI_RA007_Epitope_Rep3 1179.67642798051 1179.67477490379 21.909 3 0.17737827210325302 0.0006801564359802754 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 29335 11795 FVDSSVGYY True H1975_Epitope_Rep2 1035.45492704071 1035.4543749679299 50.443 1 0.17737773382604977 0.0006801564359802754 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'ENST00000492816.6_1_2:216257645-216258011:-|nuORF', 'FN1-PECR|2|fusion'] 26556 9413 FIVNTNVPR True NCI_RA007_Epitope_Rep2 1058.58727862294 1058.5861899358601 41.225 2 0.17737400644857815 0.0006801564359802754 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 137972 6758 YQAEAREAL True PC9_epitope_Rep2 1049.5141732523298 1049.5130699358601 31.402 2 0.17737284724983 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 94420 16416 RYFENPQVI True PC9_epitope_Rep3 1164.5927579262 1164.5916699358602 68.281 2 0.17737191856379142 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 132983 19962 VYVEKISFL True PC9_epitope_Rep2 1096.6168474157198 1096.61574993586 82.183 2 0.17736854892610696 0.0006801564359802754 0.9438714419765777 ['ENSG00000171017|ENST00000306708|LRRC8E'] 106191 14495 SVPIDLQKV True PC9_epitope_Rep2 997.58079626017 997.57968993586 61.024 2 0.17736681279386812 0.0006801564359802754 0.9438714419765777 ['ENSG00000198056|ENST00000338193|PRIM1'] 107343 18203 SYRQVAFDF True PC9_epitope_Rep2 1131.5349086969097 1131.53380993586 75.325 2 0.1773663217160506 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 126344 9661 VPKNSDPWAA True PC9_epitope_Rep5 1083.53490869691 1083.53380993586 42.128 2 0.17736611673525143 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 125622 11280 VMEKSFLEY True H1975_Epitope_Rep3 1144.5474475265598 1144.54634993586 48.494 2 0.17736604315097873 0.0006801564359802754 0.9438714419765777 ['ENST00000513342.5_1_17:46990150-47004493:+|nuORF', 'nc|ENSG00000159202|Q9H832-2|UBE2Z', 'ENSG00000159202|ENST00000360943|UBE2Z'] 34973 9965 GQYPRALEL True NCI_RA007_Epitope_Rep3 1045.55564414149 1045.5545499358602 46.282 2 0.17736552240139336 0.0006801564359802754 0.9438714419765777 ['ENSG00000167208|ENST00000330943|SNX20'] 97709 20376 SHEEALSFVSL True PC9_epitope_Rep3 1217.5928174958499 1217.59172993586 83.627 2 0.17736017144345786 0.0006801564359802754 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1', 'ENST00000494904.1_1_1:65325735-65330472:-|nuORF'] 28178 17524 FRNIPGITL True PC9_epitope_Rep6 1029.5971150306498 1029.5960099358601 80.039 2 0.17735919335618666 0.0006801564359802754 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 134813 19152 WYQTKFETL True PC9_epitope_Rep3 1214.5971746002997 1214.5960699358602 78.89 2 0.17735194223805079 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 132886 17035 VYTSKSDVWSF True PC9_epitope_Rep6 1317.62411762413 1317.6230299358601 78.081 2 0.17734660887022408 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 130621 16316 VVAGRFIEV True PC9_epitope_Rep1 988.5705659296399 988.56946993586 67.578 2 0.17734639626071377 0.0006801564359802754 0.9438714419765777 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 29392 12180 FVEWIPNNVK True H1975_Epitope_Rep3 1244.65535818276 1244.6542699358602 52.021 2 0.17733758903499292 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 108441 5535 TEEKFIVKA True H1975_Epitope_Rep3 1063.5913609438699 1063.59026993586 26.339 2 0.17732447715756333 0.0006801564359802754 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 52584 11237 KPYESYIGA True PC9_epitope_Rep5 1026.5022115862998 1026.50110993586 48.213 2 0.1773237011619334 0.0006801564359802754 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 140090 14241 YVPETVYRV True PC9_epitope_Rep3 1124.5866099165999 1124.58550993586 59.863 2 0.17731754886357354 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 132253 20464 VYKVPPFTF True PC9_epitope_Rep3 1096.59571804832 1096.5946299358602 83.971 2 0.17731092548021038 0.0006801564359802754 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 74085 9759 NHVASDISL True PC9_epitope_Rep4 954.47705946762 954.47596993586 45.18 2 0.17730997004199828 0.0006801564359802754 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 107157 17767 SYNEHWNYL True PC9_epitope_Rep3 1224.5199869087598 1224.5188899358602 73.538 2 0.1773096892701687 0.0006801564359802754 0.9438714419765777 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 114464 4846 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 23.728 3 0.17730952396147678 0.0006801564359802754 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 85015 19424 QIFNGTFVKL True PC9_epitope_Rep4 1165.64954452633 1165.64844993586 82.827 2 0.1773032607598276 0.0006801564359802754 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 132094 16415 VYILQPEVI True NCI_RA007_Epitope_Rep4 1072.6168474157198 1072.61574993586 71.146 2 0.17729906869065368 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 91296 19551 RLYPEGLAQL True PC9_epitope_Rep1 1158.6397081186199 1158.6386099358601 80.028 2 0.17729287355725268 0.0006801564359802754 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 8519 10267 [Acetylation]-ATVQQLEGR True NCI_RA007_Epitope_Rep1 1042.54072266964 1042.5396299358601 43.946 2 0.17729213332137167 0.0006801564359802754 0.9438714419765777 ['ENSG00000164687|ENST00000297258|FABP5'] 70463 19188 LYSEVDVHF True PC9_epitope_Rep1 1107.52367530687 1107.52256993586 78.601 2 0.17729053179476703 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 21062 6833 ERDM[Oxidation]SNVSL True PC9_epitope_Rep5 1065.47607387189 1065.4749699358601 31.255 2 0.1772825328676632 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 21334 14552 ERLGQFM[Oxidation]TL True PC9_epitope_Rep4 1109.55393026977 1109.55282993586 63.888 2 0.1772783681116182 0.0006801564359802754 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 87411 10784 QTDQM[Oxidation]VFNAY True H1975_Epitope_Rep2 1231.51793868387 1231.5168499358601 46.511 2 0.17727733355065742 0.0006801564359802754 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 30420 13167 GAFVHFHGV True PC9_epitope_Rep1 969.4820852784097 969.48098993586 55.512 2 0.17727273111038183 0.0006801564359802754 0.9438714419765777 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 139671 22063 YTTDFIYQL True PC9_epitope_Rep2 1162.55464108198 1162.55354993586 90.337 2 0.17726895978237844 0.0006801564359802754 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 88227 14595 QYDPYTDSRF True PC9_epitope_Rep1 1290.55168095986 1290.5505899358602 60.963 2 0.17726117281611573 0.0006801564359802754 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 21620 10879 ERSPVIQTL True PC9_epitope_Rep4 1041.58185888933 1041.5807699358602 49.611 2 0.17725376454485095 0.0006801564359802754 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.G10576W|1|0.15|ENSG00000181143|chr19:8939229-8939229|C/A|missense_variant'] 11603 19628 DHAEFSYVL True PC9_epitope_Rep2 1079.49237517859 1079.4912699358601 80.884 2 0.1772484918075641 0.0006801564359802754 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 114351 13162 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45507496793 55.723 1 0.17724178192558504 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 31751 7956 GELERALSA True H1975_Epitope_Rep2 944.4927095317598 944.49160993586 35.551 2 0.1772412143765667 0.0006801564359802754 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G'] 86786 13821 QRNEVVVEL True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 58.006 2 0.1772390686333209 0.0006801564359802754 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 30540 17926 GAIPRLVQL True PC9_epitope_Rep4 965.6022004110898 965.60110993586 77.0 2 0.17723193386141442 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 138284 13252 YQYPRPLLI True H1975_Epitope_Rep1 1161.6546299067697 1161.6535299358602 56.07 2 0.17722519721154248 0.0006801564359802754 0.9438714419765777 ['ENSG00000160991|ENST00000495936|ORAI2'] 27120 18163 FLQPELVKL True PC9_epitope_Rep6 1085.6484818971699 1085.64738993586 82.506 2 0.17722239946687773 0.0006801564359802754 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4'] 30189 13944 FYVEHPEV True PC9_epitope_Rep5 1018.4759968384599 1018.47488993586 58.656 2 0.17721884297584106 0.0006801564359802754 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF'] 106980 15380 SYLENVDHF True PC9_epitope_Rep6 1122.49818883502 1122.49708993586 71.305 2 0.17721140469430313 0.0006801564359802754 0.9438714419765777 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-5|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF'] 124367 10596 VLDVETGNEY True H1975_Epitope_Rep3 1137.51898384925 1137.51788993586 45.827 2 0.17720635186080957 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12'] 3841 15045 AGYTDNLVRV True PC9_epitope_Rep3 1106.57202248162 1106.57092993586 63.001 2 0.17720615559693542 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000509148.1_1_5:180663979-180664048:-|nuORF'] 41973 10015 IEDFEARIA True H1975_Epitope_Rep2 1062.53457434374 1062.53346993586 43.514 2 0.1772014322978712 0.0006801564359802754 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 77493 13464 NYPQSVPRL True PC9_epitope_Rep5 1072.56654317836 1072.5654499358602 56.807 2 0.17719763771612837 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 67270 4757 LTDNGRHITY True H1975_Epitope_Rep2 1188.58873517492 1188.5876299358601 23.387 2 0.17718328679105128 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 72364 8540 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46340993586 37.837 2 0.1771769475037789 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 40567 21249 HSSVIFIF True PC9_epitope_Rep3 948.5069030439199 948.50580993586 87.027 2 0.17716803744969448 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 87645 21442 QVADILFQTA True PC9_epitope_Rep5 1104.5815245361598 1104.5804299358601 87.532 2 0.17716277935903932 0.0006801564359802754 0.9438714419765777 ['ENSG00000114491|ENST00000232607|UMPS'] 7751 10866 ASVAWAVLK True NCI_RA007_Epitope_Rep3 943.5491022090699 943.54800993586 49.802 2 0.17715902105778983 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3', 'ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B'] 114032 10337 TRMSTVSEL True PC9_epitope_Rep1 1022.5066453437399 1022.5055499358599 44.643 2 0.17715416854190472 0.0006801564359802754 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 65023 12616 LSDISVVSNY True H1975_Epitope_Rep2 1095.54480467427 1095.54370993586 53.625 2 0.177147864592184 0.0006801564359802754 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.S393F|1|0.37|ENSG00000137965|chr1:78662768-78662768|C/T|missense_variant', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 88599 13657 RALNQEQVIAV True PC9_epitope_Rep1 1239.6935345966301 1239.6924299358602 57.387 2 0.17713321654366096 0.0006801564359802754 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 47744 8675 IYQKYIARF True NCI_RA007_Epitope_Rep4 1200.6655289436396 1200.6638849037902 40.157 3 0.17713089555775213 0.0006801564359802754 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'CASZ1|p.I804Yfs*73|1|0.28|ENSG00000130940|chr1:10653648-10653648|G/-|frameshift_variant', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 95592 12773 [Acetylation]-SASVVSVISR True H1975_Epitope_Rep1 1045.57677382519 1045.57566993586 54.192 2 0.17712882936694752 0.0006801564359802754 0.9438714419765777 ['ENSG00000129562|ENST00000250498|DAD1'] 101990 8873 SPNMANTVNA True PC9_epitope_Rep5 1017.45494412405 1017.45384993586 39.074 2 0.17712716552900776 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 8017 11486 ATDPVTGDLY True H1975_Epitope_Rep3 1050.48695544498 1050.4858499358602 49.303 2 0.17712546425468026 0.0006801564359802754 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 94629 6804 RYLDKTEQW True NCI_RA007_Epitope_Rep3 1237.6091362663299 1237.60750490379 33.869 3 0.1771241281648031 0.0006801564359802754 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 94546 19981 RYINNPLLI True PC9_epitope_Rep3 1114.6498788795 1114.6487899358601 82.102 2 0.17712376820885953 0.0006801564359802754 0.9438714419765777 ['TTLL5-RGS6|2|fusion', 'TTLL5-RGS6|5|fusion', 'TTLL5-RGS6|1|fusion', 'TTLL5-RGS6|8|fusion', 'TTLL5-RGS6|4|fusion', 'TTLL5-RGS6|6|fusion', 'TTLL5-RGS6|7|fusion', 'TTLL5-RGS6|3|fusion', 'ENSG00000119685|ENST00000298832|TTLL5', 'TTLL5|p.I678Sfs*12|1|0.11|ENSG00000119685|chr14:75771750-75771756|ATAGCAT/-|frameshift_variant', 'ENST00000555422.5_1_14:76165571-76198516:+|nuORF', 'nc|ENSG00000119685|Q6EMB2-3|TTLL5'] 3486 9704 AGLQFPVGR True H1975_Epitope_Rep1 943.5239500903898 943.52284993586 42.252 2 0.17712242866659125 0.0006801564359802754 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 39798 20286 HQDSTWIVL True PC9_epitope_Rep5 1097.55055876105 1097.54946993586 83.079 2 0.17711983202781412 0.0006801564359802754 0.9438714419765777 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 16181 10041 EEEYPGITA True H1975_Epitope_Rep2 1007.4447562798298 1007.44417496793 43.614 1 0.17710968600978116 0.0006801564359802754 0.9438714419765777 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 127572 21200 VQWENSFVSV True PC9_epitope_Rep2 1193.57168812845 1193.5705899358602 87.004 2 0.17709438370479275 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 11754 19175 DHIEELVSL True PC9_epitope_Rep4 1053.53423999057 1053.5331499358601 81.854 2 0.1770922648314918 0.0006801564359802754 0.9438714419765777 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 9755 18438 AYLEAIHNF True PC9_epitope_Rep1 1076.52909504048 1076.5279899358602 75.713 2 0.17708224203159106 0.0006801564359802754 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 6888 15516 AQIKPFYTV True PC9_epitope_Rep2 1065.5858816406098 1065.58478993586 64.957 2 0.17708170235790743 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 18361 20884 EIYKEFFEV True PC9_epitope_Rep1 1202.58594121026 1202.5848499358601 85.15 2 0.17707247265291115 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 104288 14658 SSEELPLYY True H1975_Epitope_Rep2 1099.5073565363898 1099.50624993586 61.542 2 0.17706640536025214 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 113832 12723 TREEGTPLTL True PC9_epitope_Rep1 1115.5822528121498 1115.5811499358601 53.813 2 0.17706531082748703 0.0006801564359802754 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 89406 5998 REMQESVQV True H1975_Epitope_Rep3 1104.52335803704 1104.52226993586 28.084 2 0.17706414040570576 0.0006801564359802754 0.9438714419765777 ['ENSG00000103126|ENST00000262320|AXIN1', 'nc|ENSG00000103126|O15169-2|AXIN1', 'ENST00000461023.5_1_16:343426-396314:-|nuORF'] 86335 12906 QQITENPQL True PC9_epitope_Rep5 1069.54038800017 1069.53928993586 54.655 2 0.17706271047779185 0.0006801564359802754 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'ENST00000533705.5_1_9:86284090-86294929:-|nuORF'] 109513 10193 THAAQQILL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 49.849 2 0.17705372942080277 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 116794 16068 TYLPTSPLL True NCI_RA007_Epitope_Rep5 1003.55899818643 1003.55790993586 68.536 2 0.17705144646795098 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 140553 21440 YYLNEIQSF True PC9_epitope_Rep1 1175.5498900547097 1175.5487899358602 87.307 2 0.17704412802270347 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 25833 19163 FGFEITHEV True PC9_epitope_Rep2 1077.51311062317 1077.51200993586 79.084 2 0.17703697857608527 0.0006801564359802754 0.9438714419765777 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 76047 8476 NRLENDGATAL True PC9_epitope_Rep2 1172.5785644140399 1172.57746993586 37.969 2 0.17702635115725313 0.0006801564359802754 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 87447 10644 QTELSQLLK True H1975_Epitope_Rep3 1058.5971746003 1058.5960699358602 46.015 2 0.17702414369885586 0.0006801564359802754 0.9438714419765777 ['ENST00000380591.7_1_5:72801034-72801127:+|nuORF'] 86511 8462 QRAITGASL True PC9_epitope_Rep3 915.5137793295099 915.51268993586 37.511 2 0.1770238441338448 0.0006801564359802754 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 77129 17400 NYATGQWTRF True PC9_epitope_Rep5 1242.57817049122 1242.5770699358602 71.929 2 0.17701831036238633 0.0006801564359802754 0.9438714419765777 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 102886 12632 SQIALNEKL True PC9_epitope_Rep5 1014.57095985246 1014.56986993586 53.591 2 0.17701717919862772 0.0006801564359802754 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 34490 7082 GQDGSVVQFK True NCI_RA007_Epitope_Rep1 1063.52982331647 1063.5287299358602 31.541 2 0.17701566175734912 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2', 'ENSG00000177688|ENST00000326669|SUMO4', 'ENSG00000184900|ENST00000332859|SUMO3', 'nc|ENSG00000184900|P55854-2|SUMO3', 'ENST00000466861.1_1_21:46233737-46238015:-|nuORF', 'ENST00000511179.1_1_17:48313271-48313352:+|nuORF'] 133293 20559 WEMDNMLIQI True H1975_Epitope_Rep1 1291.59408044915 1291.59298993586 85.491 2 0.17701441815369007 0.0006801564359802754 0.9438714419765777 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 90517 4740 RKDPNKLVL True NCI_RA007_Epitope_Rep4 1081.6607779163699 1081.6596899358601 24.666 2 0.1770140840192037 0.0006801564359802754 0.9438714419765777 ['ENSG00000135821|ENST00000331872|GLUL', 'ENST00000491322.1_1_1:182356257-182357923:-|nuORF', 'ENST00000489818.5_1_1:182354893-182357872:-|nuORF', 'ENST00000475808.5_1_1:182355349-182357923:-|nuORF'] 44517 18880 IPADLRIISA True PC9_epitope_Rep3 1067.63389446219 1067.63278993586 77.846 2 0.1770135392720234 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 10088 7449 AYVHM[Oxidation]VTHF True PC9_epitope_Rep4 1119.5171508382302 1119.51604993586 36.006 2 0.1770128533652882 0.0006801564359802754 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 8847 9291 AVFPSIVGRPR True NCI_RA007_Epitope_Rep4 1197.69822605425 1197.6965849037902 42.594 3 0.17701155283243541 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 110410 16991 TIMPKDIQL True PC9_epitope_Rep4 1057.58416738845 1057.58306993586 73.347 2 0.17700755037554103 0.0006801564359802754 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'H3-5|p.R128H|1|0.5|ENSG00000188375|chr12:31791784-31791784|C/T|missense_variant', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 73824 13517 NHDVQVIL True PC9_epitope_Rep1 936.50288029264 936.50178993586 56.85 2 0.17700538767007254 0.0006801564359802754 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 138528 15088 YRLLPGPSA True PC9_epitope_Rep3 972.5392658013599 972.53816993586 63.172 2 0.17699944406274234 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 107068 20876 SYLSSILRF True PC9_epitope_Rep4 1084.59169529704 1084.5905899358602 88.455 2 0.1769965656374059 0.0006801564359802754 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 109701 11058 THFHELTAL True PC9_epitope_Rep4 1067.53999407735 1067.5388899358602 50.312 2 0.17699641748144948 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 55041 23436 LALFPGVAL True PC9_epitope_Rep1 899.5480395799099 899.5474949679301 94.93 1 0.176994473206948 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 9566 21326 AYANIISQF True PC9_epitope_Rep5 1025.5181960036098 1025.5170899358602 87.087 2 0.17699218524004148 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 139804 7415 YVDDPYQKY True H1975_Epitope_Rep1 1189.5291546101298 1189.52804993586 33.526 2 0.17698408502620003 0.0006801564359802754 0.9438714419765777 ['ENSG00000132313|ENST00000337109|MRPL35'] 48440 4832 KEEEIARIA True H1975_Epitope_Rep2 1057.5767735088898 1057.57566993586 23.676 2 0.1769838987237619 0.0006801564359802754 0.9438714419765777 ['ENSG00000171703|ENST00000343484|TCEA2'] 6715 15722 AQDEHLITF True PC9_epitope_Rep4 1072.5189242796 1072.5178299358602 68.399 2 0.17697323471864002 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 93628 10830 RTDYGQVFTY True H1975_Epitope_Rep1 1248.5775017848798 1248.57640993586 46.619 2 0.17696736768400279 0.0006801564359802754 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 11899 7919 DHQREITSL True PC9_epitope_Rep3 1097.54653600977 1097.54542993586 35.441 2 0.176952025110366 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'CLIP1|p.E1185Gfs*24|1|0.23|ENSG00000130779|chr12:122309804-122309805|-/T|frameshift_variant'] 1636 7472 AEFVEVTK True PC9_epitope_Rep6 921.4807478657299 921.47964993586 37.984 2 0.17694714325022357 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 86249 10805 QPYQPLREV True PC9_epitope_Rep4 1128.5927579261997 1128.5916699358602 49.32 2 0.1769467807862684 0.0006801564359802754 0.9438714419765777 ['ENST00000547003.1_1_12:49916566-49919899:+|nuORF', 'ENST00000549412.5_2_12:49906680-49920035:+|nuORF', 'ENSG00000123352|ENST00000552918|SPATS2'] 130938 21605 VVINFDFPKL True PC9_epitope_Rep2 1190.6699456177398 1190.6688499358602 88.578 2 0.1769455159458585 0.0006801564359802754 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 113891 12372 TRHPFLTAL True PC9_epitope_Rep4 1054.59236400338 1054.59126993586 55.396 2 0.17694299232078364 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 139885 7389 YVDSEGHLY True H1975_Epitope_Rep3 1081.47163973401 1081.4705499358602 33.4 2 0.17693444575663017 0.0006801564359802754 0.9438714419765777 ['ENSG00000105974|ENST00000341049|CAV1', 'ENST00000489856.1_1_7:116165116-116166890:+|nuORF'] 97562 8335 SGVSLAALK True NCI_RA007_Epitope_Rep5 844.50181766348 844.50072993586 38.735 2 0.17692652463464592 0.0006801564359802754 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 109650 5912 THDQAVQAL True PC9_epitope_Rep2 981.4879585044899 981.48686993586 28.134 2 0.17692459140662473 0.0006801564359802754 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 139389 7617 YTEDSPGLKV True H1975_Epitope_Rep3 1107.54480467427 1107.54370993586 34.279 2 0.1769230610893705 0.0006801564359802754 0.9438714419765777 ['ENSG00000106803|ENST00000223641|SEC61B'] 85826 18136 QMISRIEYI True PC9_epitope_Rep5 1151.60088008175 1151.5997899358601 74.771 2 0.1769211804192889 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E'] 103724 7249 SREPSQMEM True PC9_epitope_Rep1 1093.4532298718898 1093.45212993586 32.697 2 0.1769207015973588 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 64589 10749 LREDSTVSL True PC9_epitope_Rep1 1018.5294889633 1018.52838993586 46.234 2 0.17691908311188315 0.0006801564359802754 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4'] 24110 4771 EYSKQMQRF True NCI_RA007_Epitope_Rep3 1215.57064258263 1215.56899490379 25.73 3 0.1769163835306569 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 136506 18694 YHLDSSGSYVF True PC9_epitope_Rep1 1273.5615173675699 1273.5604299358602 76.698 2 0.17691499200066046 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 113479 9331 TQSEKQFVV True PC9_epitope_Rep1 1064.55022440788 1064.54912993586 40.748 2 0.17690832616468527 0.0006801564359802754 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 53218 9669 KTDLDLDGY True H1975_Epitope_Rep1 1038.48695544498 1038.4858499358602 42.117 2 0.17690280642617456 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'EPS15L1|p.F303Lfs*11|1|0.25|ENSG00000127527|chr19:16421360-16421360|G/-|frameshift_variant', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1'] 117128 17708 TYSPALNKMF True PC9_epitope_Rep2 1170.5743309807401 1170.5732299358601 73.396 2 0.17689498763247388 0.0006801564359802754 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 12650 9805 DLEIATYR True NCI_RA007_Epitope_Rep1 979.4974605590301 979.49636993586 42.142 2 0.17688635780714188 0.0006801564359802754 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 132166 10069 VYISEHEHF True PC9_epitope_Rep5 1159.5298233164701 1159.5281849037901 43.711 3 0.1768829519076073 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 4374 9013 AIQLPISSK True NCI_RA007_Epitope_Rep5 955.5702315764701 955.56912993586 41.327 2 0.1768826014114748 0.0006801564359802754 0.9438714419765777 ['ENST00000518468.1_3_8:53599460-53658116:-|nuORF'] 102950 11713 SQIPAQPSV True PC9_epitope_Rep2 925.48689587533 925.48578993586 50.385 2 0.1768705120400262 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 84649 14727 QHEEFVTSL True PC9_epitope_Rep5 1088.51383889916 1088.51274993586 61.646 2 0.17686403689458433 0.0006801564359802754 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 134911 7355 YADPVNAHY True H1975_Epitope_Rep3 1048.46140940348 1048.46030993586 33.266 2 0.17685285554376412 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 75362 12563 NQDDSILKV True PC9_epitope_Rep2 1030.5294889632999 1030.52838993586 53.632 2 0.17684489496773448 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 17385 12236 EHFDASHVAL True PC9_epitope_Rep5 1124.5250722892 1124.52343490379 52.051 3 0.17684303326814232 0.0006801564359802754 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH'] 128421 11125 VSEEIEDIIK True H1975_Epitope_Rep1 1173.6128842340897 1173.61178993586 47.757 2 0.17683959262988735 0.0006801564359802754 0.9438714419765777 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-3|GGCT'] 93989 11578 RVPKTLVLV True PC9_epitope_Rep4 1023.6804507317898 1023.6793499358599 52.295 2 0.17683453431000104 0.0006801564359802754 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 37608 8436 GYSFTTTAER True PC9_epitope_Rep6 1131.51965255559 1131.5185499358602 42.14 2 0.17683161970799843 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 140350 8260 YYEHVKARF True PC9_epitope_Rep3 1211.60874234351 1211.60710490379 36.747 3 0.1768315128231304 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 77231 13252 NYIGLINRI True NCI_RA007_Epitope_Rep4 1074.61857875122 1074.61748993586 58.105 2 0.17682708980069245 0.0006801564359802754 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2', 'ENST00000496059.1_1_2:37364124-37368826:-|nuORF'] 89266 4750 RELEDATETA True NCI_RA007_Epitope_Rep4 1133.52004647841 1133.51894993586 24.703 2 0.17682307189795704 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 96732 11205 SEQFTAMFR True H1975_Epitope_Rep3 1115.5069796969099 1115.50588993586 48.199 2 0.17681546723127675 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 74143 14529 NHYNMQYAL True PC9_epitope_Rep5 1152.50222866964 1152.50112993586 60.884 2 0.17681481564646076 0.0006801564359802754 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2'] 88319 14628 QYLGQIQHI True PC9_epitope_Rep1 1098.5821932425 1098.58108993586 61.089 2 0.1768052114427184 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 70304 20580 LYPEVFEKF True PC9_epitope_Rep1 1170.5961119711399 1170.5950099358602 83.975 2 0.17680136116793088 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 128195 11936 VRTPYTMSY True PC9_epitope_Rep4 1116.52738078832 1116.5262899358602 53.702 2 0.1767999412523134 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 136594 15236 YHYDMNTASL True PC9_epitope_Rep1 1213.5073736197298 1213.50626993586 63.425 2 0.1767979618310915 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-15|NR3C1', 'nc|ENSG00000113580|P04150-14|NR3C1', 'nc|ENSG00000113580|P04150-5|NR3C1', 'nc|ENSG00000113580|P04150-13|NR3C1', 'nc|ENSG00000113580|P04150-12|NR3C1', 'nc|ENSG00000113580|P04150-11|NR3C1', 'nc|ENSG00000113580|P04150-8|NR3C1'] 113773 8005 TRDPQVNAF True PC9_epitope_Rep4 1046.5145076054998 1046.5134099358602 38.241 2 0.1767891574835034 0.0006801564359802754 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 105828 12697 SVIPQIQKV True PC9_epitope_Rep6 1010.6124307416198 1010.61132993586 60.315 2 0.17678883504482734 0.0006801564359802754 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 91496 6608 RNVSTGDVNVE True PC9_epitope_Rep5 1188.5734790335998 1188.5723899358602 30.39 2 0.17678877113569547 0.0006801564359802754 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 102897 11616 SQIDPSSIERA True PC9_epitope_Rep5 1201.5938801250102 1201.59278993586 49.676 2 0.17678408268451462 0.0006801564359802754 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 75578 18709 NQPGVLIQV True PC9_epitope_Rep4 966.5498304850599 966.54872993586 80.043 2 0.1767830801805904 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 82160 14893 PTDYADIMM[Oxidation]GY True H1975_Epitope_Rep3 1291.51007642211 1291.50896993586 62.671 2 0.17678123787581776 0.0006801564359802754 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 105996 11716 SVLKSIQEV True PC9_epitope_Rep6 1001.57571087973 1001.5746099358599 56.212 2 0.17677862531860952 0.0006801564359802754 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 132303 13760 VYLPGSRQTL True PC9_epitope_Rep5 1132.62405805448 1132.62296993586 57.95 2 0.17677453557296488 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 1967 5523 AEIRAINEA True NCI_RA007_Epitope_Rep5 985.51925863277 985.51816993586 27.93 2 0.17677334965870045 0.0006801564359802754 0.9438714419765777 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 103325 13908 SQVDRLVAL True PC9_epitope_Rep6 999.5712942056298 999.57018993586 65.336 2 0.1767732595284063 0.0006801564359802754 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 93932 18857 RVLDELTLA True PC9_epitope_Rep5 1028.5866099165999 1028.58550993586 77.551 2 0.17676915713924493 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 24672 8747 FATHAAALSVR True PC9_epitope_Rep1 1142.6196413803798 1142.61799490379 38.484 3 0.17676146922097422 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 138023 21391 YQDEVFGGF True PC9_epitope_Rep5 1060.4501760134397 1060.44967496793 87.342 1 0.17676097623837267 0.0006801564359802754 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 43602 18713 IIIDSVPEV True PC9_epitope_Rep6 983.55391280599 983.55280993586 84.622 2 0.17676070643031583 0.0006801564359802754 0.9438714419765777 ['ENSG00000174306|ENST00000683867|ZHX3', 'nc|ENSG00000174306|Q9H4I2-2|ZHX3'] 107774 19834 TAM[Oxidation]DVVYAL True PC9_epitope_Rep1 997.4790339940099 997.47792993586 81.107 2 0.1767576021156455 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 133695 20454 WLAEKLPTL True PC9_epitope_Rep5 1069.61718176889 1069.6160899358601 83.712 2 0.17675701149663853 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 103610 16258 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.59957490379 67.673 3 0.17675152688737086 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 113507 11009 TQTAVITRI True PC9_epitope_Rep1 1001.5869442697699 1001.58584993586 47.234 2 0.17674994215008769 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 114343 6777 TSDDVKEQIY True H1975_Epitope_Rep3 1196.55609763396 1196.5550099358602 31.022 2 0.17674710989687709 0.0006801564359802754 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 90193 16686 RHIEIFTDL True PC9_epitope_Rep2 1142.6084079903399 1142.60730993586 69.428 2 0.17674701089022518 0.0006801564359802754 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 83096 22811 PYNDYFEYF True PC9_epitope_Rep5 1256.50260550912 1256.5015099358602 92.736 2 0.17674629948658924 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 35661 8378 GTMTGMLYK True NCI_RA007_Epitope_Rep5 1000.47217441132 1000.47106993586 38.901 2 0.1767455673945426 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 129281 4701 VTDRDIDRY True H1975_Epitope_Rep3 1151.55710069347 1151.55544490379 23.208 3 0.17674516773463325 0.0006801564359802754 0.9438714419765777 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 76528 12995 NTDNLLTEY True H1975_Epitope_Rep2 1081.49276910141 1081.49166993586 55.103 2 0.1767297473045328 0.0006801564359802754 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF'] 7641 4462 ASLPSESNEPK True NCI_RA007_Epitope_Rep4 1157.5564319871298 1157.55532993586 23.539 2 0.17672595344559572 0.0006801564359802754 0.9438714419765777 ['ENSG00000107651|ENST00000369075|SEC23IP', 'nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP'] 60331 20655 LIGEFLEKV True PC9_epitope_Rep1 1046.60119735158 1046.60010993586 84.271 2 0.17672586095749887 0.0006801564359802754 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 120420 22334 VFTEVANLF True PC9_epitope_Rep2 1038.53859709502 1038.53750993586 91.392 2 0.17672054073662946 0.0006801564359802754 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 104324 12319 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45284993586 52.469 2 0.1767192949120629 0.0006801564359802754 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 138832 8821 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.48097496793 38.896 1 0.1767179847457567 0.0006801564359802754 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 104327 11197 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep3 1170.4539414449798 1170.45284993586 48.167 2 0.17671739465967182 0.0006801564359802754 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 86279 8574 QQDPQQYNV True PC9_epitope_Rep4 1118.49925146418 1118.49814993586 40.461 2 0.1767171137489333 0.0006801564359802754 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 68427 22653 LTTLELLEV True PC9_epitope_Rep2 1029.5957776179698 1029.59468993586 92.631 2 0.17671596047134333 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 40294 10236 HRQEIQVVL True PC9_epitope_Rep4 1120.63529144452 1120.6341899358601 47.051 2 0.17671517026394842 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 39267 20809 HLPDAAALLPV True PC9_epitope_Rep5 1115.63389446219 1115.63278993586 85.092 2 0.17669563433671 0.0006801564359802754 0.9438714419765777 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 124652 19392 VLIGEFLEKV True PC9_epitope_Rep6 1145.66961126457 1145.6685099358601 87.244 2 0.17669384893890885 0.0006801564359802754 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 23600 11575 EYEALLNIK True H1975_Epitope_Rep1 1091.58627556343 1091.5851699358602 49.511 2 0.17669123994075955 0.0006801564359802754 0.9438714419765777 ['CON__P05784', 'ENST00000397031.2_1_2:182825941-182826409:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000534205.1_1_11:35881882-35882566:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 137329 21181 YLIPDIDLKL True PC9_epitope_Rep4 1201.69582601241 1201.69472993586 89.636 2 0.1766909223148847 0.0006801564359802754 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 114016 14811 TRMPDGPVAL True PC9_epitope_Rep1 1055.54336520563 1055.54226993586 61.791 2 0.1766906375560886 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 35739 6249 GTTAVFINK True NCI_RA007_Epitope_Rep5 949.5232813840499 949.52218993586 30.714 2 0.17668389392352316 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 105608 10533 SVELPIVGK True NCI_RA007_Epitope_Rep4 940.5593325395998 940.55822993586 47.361 2 0.17668152662477435 0.0006801564359802754 0.9438714419765777 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 22466 17219 ETHFGFETV True PC9_epitope_Rep5 1065.47672511445 1065.47562993586 71.253 2 0.17667918481417771 0.0006801564359802754 0.9438714419765777 ['ENSG00000110871|ENST00000288532|COQ5', 'ENST00000547736.1_1_12:120964341-120966944:-|nuORF', 'ENST00000547448.1_1_12:120965158-120966944:-|nuORF'] 84094 8884 QEQFNSIAA True H1975_Epitope_Rep2 1006.4719740871798 1006.47086993586 39.143 2 0.17667515884249635 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 162 13589 AADPVSPLL True NCI_RA007_Epitope_Rep5 881.4858332461699 881.48528496793 58.956 1 0.17666932835667878 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 94503 14865 RYIANTVEL True PC9_epitope_Rep3 1077.58185888933 1077.5807699358602 62.315 2 0.1766672234029255 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 45007 20883 IQLPSEKAIFL True PC9_epitope_Rep1 1257.7332741502898 1257.7321699358602 85.146 2 0.17666685172166988 0.0006801564359802754 0.9438714419765777 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 76035 15887 NRLDFSTAI True PC9_epitope_Rep4 1035.53490869691 1035.53380993586 69.04 2 0.17666328716118124 0.0006801564359802754 0.9438714419765777 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32', 'ENST00000520511.1_1_8:124539464-124553254:-|nuORF', 'FBXO32|p.S116Lfs*38|3|0.15|ENSG00000156804|chr8:123531910-123531923|GTTAAATCTTCTGG/-|frameshift_variant', 'nc|ENSG00000156804|Q969P5-2|FBXO32', 'ENST00000521719.5_1_8:124526414-124553254:-|nuORF'] 41127 10905 HYPLNTVTF True NCI_RA007_Epitope_Rep3 1090.54474510462 1090.54364993586 49.969 2 0.1766616690025594 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 17722 15251 EHSLVIDTL True PC9_epitope_Rep6 1025.53932537101 1025.53822993586 70.772 2 0.1766333503770782 0.0006801564359802754 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 96713 12013 SEQEHFLIV True H1975_Epitope_Rep3 1100.5502244078798 1100.54912993586 51.368 2 0.1766328892724436 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ADD1-FAM193A|4|fusion', 'ADD1-FAM193A|3|fusion', 'ADD1-FAM193A|1|fusion', 'ADD1-FAM193A|2|fusion', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 44680 20731 IPMELVNEV True PC9_epitope_Rep2 1042.53688284286 1042.53578993586 85.179 2 0.17663159542763063 0.0006801564359802754 0.9438714419765777 ['ENSG00000108773|ENST00000225916|KAT2A', 'nc|ENSG00000108773|Q92830-2|KAT2A'] 86592 19867 QRDFNMIDL True PC9_epitope_Rep3 1150.54409348162 1150.54298993586 81.655 2 0.1766291211043965 0.0006801564359802754 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 10046 19844 AYVGDLQTL True PC9_epitope_Rep1 978.5022115863 978.5016649679301 81.146 1 0.1766263161301404 0.0006801564359802754 0.9438714419765777 ['ENSG00000065802|ENST00000264607|ASB1'] 104228 11331 SSDNIMVQY True H1975_Epitope_Rep1 1055.45936079815 1055.45877496793 48.563 1 0.176625349247426 0.0006801564359802754 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 131880 10437 VYDTNPAKF True PC9_epitope_Rep2 1053.51311062317 1053.51200993586 45.465 2 0.17662425468976523 0.0006801564359802754 0.9438714419765777 ['ENSG00000139433|ENST00000318348|GLTP'] 71121 18954 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 78.676 2 0.17662301081712267 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 19342 9884 ELNEFLTR True H1975_Epitope_Rep3 1020.52400966004 1020.52290993586 43.05 2 0.1766182963679191 0.0006801564359802754 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 29245 20035 FVDEYDPTI True PC9_epitope_Rep1 1097.49170647225 1097.4906099358602 81.892 2 0.1766143793005488 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 64475 12630 LQVEEVHQL True PC9_epitope_Rep2 1093.57677350889 1093.57566993586 53.89 2 0.1766134794911133 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184047|Q9NR28-2|DIABLO', 'nc|ENSG00000184047|Q9NR28-3|DIABLO', 'ENSG00000184047|ENST00000464942|DIABLO'] 136558 14571 YHSEVPVSL True PC9_epitope_Rep5 1029.51311062317 1029.51257496793 61.046 1 0.17661205210181158 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 114022 14630 TRMPDGPVAL True PC9_epitope_Rep5 1055.54336520563 1055.54226993586 61.275 2 0.17658575795787815 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 72386 7424 MTEGSTVNTEY True H1975_Epitope_Rep1 1230.50743318938 1230.50632993586 33.56 2 0.1765783300841173 0.0006801564359802754 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 2862 10556 AEYDRPNLLP True H1975_Epitope_Rep1 1186.59823722946 1186.5971499358602 45.555 2 0.1765778268985736 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 138552 20074 YRNEFTAWY True PC9_epitope_Rep1 1248.55637241748 1248.55526993586 82.043 2 0.17657586710721077 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000232388|A0A096LP01-2|SMIM26', 'ENSG00000232388|ENST00000411646|SMIM26'] 8247 21307 ATIIQLFQV True PC9_epitope_Rep6 1031.6015317047497 1031.6004299358601 94.811 2 0.17657522578722235 0.0006801564359802754 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 102870 14434 SQHGVIIQL True PC9_epitope_Rep4 993.5607295219299 993.55962993586 63.428 2 0.17657463424373226 0.0006801564359802754 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 139097 10354 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 44.835 2 0.17657096740152953 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 67109 11842 LTDDDLLRY True H1975_Epitope_Rep3 1122.55570371114 1122.55460993586 50.697 2 0.17655801056586698 0.0006801564359802754 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 111754 11950 TLQKEGVIGV True PC9_epitope_Rep3 1042.6022599807397 1042.60116993586 50.989 2 0.17655570958441621 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 88480 12815 RAAEEFVNV True PC9_epitope_Rep1 1033.5192586327698 1033.5181699358602 54.167 2 0.17655068993714507 0.0006801564359802754 0.9438714419765777 ['ENSG00000132661|ENST00000254998|NXT1'] 85825 16539 QMISRIEYI True PC9_epitope_Rep4 1151.60088008175 1151.5997899358601 71.591 2 0.17655041157234555 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E'] 100161 21024 SLLENLEKI True PC9_epitope_Rep1 1057.60192562757 1057.60082993586 85.696 2 0.17654254818374643 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 45399 12145 ISDRLIGIY True H1975_Epitope_Rep1 1048.59169529704 1048.5905899358602 51.732 2 0.17654035154205153 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'SMC4|p.E1257Q|1|0.11|ENSG00000113810|chr3:160433711-160433711|G/C|missense_variant'] 61248 20852 LLDRFLATV True PC9_epitope_Rep3 1046.61243074162 1046.61132993586 85.48 2 0.17653286013943775 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 36386 20770 GVIAEILRGV True PC9_epitope_Rep4 1025.6233297784897 1025.62222993586 88.047 2 0.17652806420450717 0.0006801564359802754 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 103550 10640 SRDDTTLNAL True PC9_epitope_Rep2 1104.54111627616 1104.54000993586 46.241 2 0.17652308758808571 0.0006801564359802754 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 67563 7979 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.51367496793 35.638 1 0.17652278606961888 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 95056 14158 RYSEYAEEF True PC9_epitope_Rep1 1192.5036681382796 1192.50256993586 59.281 2 0.1765177884217015 0.0006801564359802754 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 69714 20580 LWAPRPFNL True PC9_epitope_Rep2 1112.61309944796 1112.6120099358602 84.593 2 0.17651585341217 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 20674 19791 EQIEALLHTV True PC9_epitope_Rep2 1151.6186383208699 1151.61754993586 81.515 2 0.17651576502332872 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000241258|O75575-3|CRCP', 'ENST00000492264.1_1_7:65615923-65617341:+|nuORF', 'nc|ENSG00000241258|O75575-4|CRCP', 'nc|ENSG00000241258|O75575-2|CRCP', 'ENSG00000241258|ENST00000395326|CRCP'] 16266 12989 EEIEGLISA True NCI_RA007_Epitope_Rep3 959.4811417885498 959.48004993586 58.368 2 0.17651234479608988 0.0006801564359802754 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 103511 16993 SRDAFGYATL True PC9_epitope_Rep1 1099.52982331647 1099.5287299358602 70.187 2 0.1765083179353792 0.0006801564359802754 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 137116 7486 YLDDPTVPR True H1975_Epitope_Rep1 1074.53457434374 1074.53346993586 33.791 2 0.17650020529260912 0.0006801564359802754 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153761151-153761283:-|nuORF'] 6713 17224 AQDEHLITF True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 71.405 2 0.17649661903011574 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 8032 8099 ATDTASGTGLY True H1975_Epitope_Rep3 1055.4771190372699 1055.47657496793 36.127 1 0.17649151134872065 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574', 'ZNF574|p.Q224Sfs*144|1|0.3|ENSG00000105732|chr19:42079275-42079275|C/-|frameshift_variant'] 31926 13017 GEQWTPIEP True H1975_Epitope_Rep3 1055.4923751785898 1055.4912699358601 55.307 2 0.1764882272361307 0.0006801564359802754 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 8127 9410 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51166993586 41.162 2 0.1764879669977973 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 88857 5003 REAEFTKSIA True H1975_Epitope_Rep3 1150.59823722946 1150.5971499358602 24.371 2 0.1764870523894743 0.0006801564359802754 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 139454 6666 YTETEPYHNY True H1975_Epitope_Rep3 1315.5356965425499 1315.5345899358601 30.595 2 0.17648400598263705 0.0006801564359802754 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 75190 4054 NNPSKPLHVIK True NCI_RA007_Epitope_Rep2 1245.7193554216499 1245.71770490379 20.408 3 0.17648051180332244 0.0006801564359802754 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 48935 9179 KEYDGVVVV True H1975_Epitope_Rep3 1006.5335117145797 1006.53240993586 40.297 2 0.17647916466651506 0.0006801564359802754 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 48378 9097 KEAIETIVAA True H1975_Epitope_Rep3 1043.5862755634298 1043.5851699358602 39.98 2 0.17647849475949437 0.0006801564359802754 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 120849 15395 VGDPSVHLL True PC9_epitope_Rep1 935.5076313199099 935.50652993586 64.035 2 0.17647757938936162 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 134860 16439 YAAELIERV True PC9_epitope_Rep5 1062.57095985246 1062.5698699358602 68.231 2 0.1764684308815255 0.0006801564359802754 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 52876 9675 KRFDDKYTL True PC9_epitope_Rep3 1184.6189726740397 1184.61733490379 42.163 3 0.17644633045845198 0.0006801564359802754 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 135567 6560 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52897496793 30.192 1 0.1764463191664856 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 116575 13455 TYGEIFEKF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.5429699358601 58.954 2 0.1764429173432027 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 72627 11752 MVVQDGIVKA True PC9_epitope_Rep2 1058.57941636118 1058.57830993586 50.536 2 0.1764352961421448 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 35653 4784 GTMRGIIAK True NCI_RA007_Epitope_Rep4 945.5429712828098 945.54186993586 24.837 2 0.1764243413775803 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000582379.1_1_17:7125565-7126253:+|nuORF'] 9857 19505 AYLPVNESF True PC9_epitope_Rep4 1038.5022115863 1038.50110993586 83.144 2 0.1764221199224431 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 84705 16129 QHFDTIYSI True PC9_epitope_Rep6 1122.53457434374 1122.53346993586 74.383 2 0.17642162347499668 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 17794 19180 EHVPVVIGL True PC9_epitope_Rep3 961.5596668927699 961.55856993586 78.994 2 0.17642047916208192 0.0006801564359802754 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6', 'SOCS6|p.E434Gfs*2|1|0.26|ENSG00000170677|chr18:70325969-70325979|AGCACTCAAAT/-|frameshift_variant'] 52655 6003 KQFEKQVEL True NCI_RA007_Epitope_Rep4 1147.6237237013097 1147.62208490379 29.709 3 0.17641950006827956 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 131505 19139 VVVDPIQSV True PC9_epitope_Rep5 954.53859709502 954.53750993586 78.653 2 0.17641768301446958 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 138309 18983 YRAPELLL True PC9_epitope_Rep5 973.5596668927699 973.55856993586 78.044 2 0.1764146600645052 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'CDK19|p.G207V|2|0.16|ENSG00000155111|chr6:110632056-110632056|C/A|missense_variant', 'ENSG00000155111|ENST00000368911|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'CDK8|p.H300Qfs*3|1|0.14|ENSG00000132964|chr13:26397191-26397192|AT/-|frameshift_variant', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 39675 9460 HPTEDLVVSA True PC9_epitope_Rep4 1066.5294889632999 1066.52838993586 43.997 2 0.17641325167162505 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 47427 13897 IYIKQIKTF True PC9_epitope_Rep1 1152.6906810623198 1152.68958993586 58.291 2 0.17641149793643202 0.0006801564359802754 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 55633 6490 LDADPSLQR True NCI_RA007_Epitope_Rep1 1013.51417325233 1013.51306993586 29.264 2 0.1764056980083044 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 114207 19204 TRVDTILEF True PC9_epitope_Rep4 1092.5815245361598 1092.5804299358601 81.968 2 0.17640402978620634 0.0006801564359802754 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 103647 15770 SRDMTMFVT True PC9_epitope_Rep1 1086.48380172418 1086.4827099358602 65.482 2 0.17640139559042267 0.0006801564359802754 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 86837 14833 QRQDIAFAY True PC9_epitope_Rep1 1110.5458077337798 1110.54470993586 61.874 2 0.17639565396132123 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 109966 18655 THSLPVVVI True PC9_epitope_Rep3 963.5753169569099 963.57420993586 76.976 2 0.17639395089518306 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 138022 20472 YQDEVFGGF True PC9_epitope_Rep4 1060.4501760134397 1060.44906993586 86.892 2 0.1763937078207246 0.0006801564359802754 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 107110 20664 SYMGHFDLL True PC9_epitope_Rep3 1081.49026700361 1081.48967496793 84.757 1 0.17638755913404952 0.0006801564359802754 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 12603 5750 DLEAHIDSANK True NCI_RA007_Epitope_Rep1 1211.57823006087 1211.57659490379 26.422 3 0.17638154677279688 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 38131 6875 HEQFKATLP True H1975_Epitope_Rep3 1069.55564414149 1069.5545499358602 31.403 2 0.17638063522960087 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 20689 19029 EQIKDIFYI True PC9_epitope_Rep6 1167.6175756917098 1167.61646993586 85.837 2 0.17637790689800048 0.0006801564359802754 0.9438714419765777 ['ENSG00000164902|ENST00000297540|PHAX'] 39794 19939 HQDSTWIVL True PC9_epitope_Rep2 1097.55055876105 1097.54946993586 82.092 2 0.17637436378113616 0.0006801564359802754 0.9438714419765777 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 24328 10315 FADLSEAANR True PC9_epitope_Rep1 1092.5199869087598 1092.5188899358602 44.561 2 0.17637420321679673 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 54394 9021 KYQPRIAVF True NCI_RA007_Epitope_Rep4 1120.6393141958 1120.63820993586 41.532 2 0.17637368246744484 0.0006801564359802754 0.9438714419765777 ['ENSG00000139372|ENST00000392872|TDG'] 24111 4785 EYSKQMQRF True NCI_RA007_Epitope_Rep3 1215.57064258263 1215.56954993586 25.785 2 0.176370171816245 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 128515 9277 VSGGLEVLAEK True H1975_Epitope_Rep3 1100.607739284 1100.60664993586 40.678 2 0.17636220690156687 0.0006801564359802754 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF', 'nc|ENSG00000248546|O43423|ANP32CP'] 104750 10922 STDLQDYTY True H1975_Epitope_Rep2 1104.46113461996 1104.4600299358601 47.043 2 0.17634625870618756 0.0006801564359802754 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 135281 16014 YAYTGVLQL True H1975_Epitope_Rep2 1026.53859709502 1026.53750993586 66.797 2 0.1763456662439011 0.0006801564359802754 0.9438714419765777 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4', 'KLHL4|p.Q238H|1|0.86|ENSG00000102271|chrX:87614557-87614557|G/T|missense_variant'] 77250 19662 NYINDLRNF True PC9_epitope_Rep3 1167.56727145435 1167.5661699358602 80.866 2 0.17634333418818185 0.0006801564359802754 0.9438714419765777 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 107431 19176 SYVAGLPRF True PC9_epitope_Rep1 1008.5392658013599 1008.53816993586 78.554 2 0.17633860594465214 0.0006801564359802754 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF'] 136439 13752 YHGEVPVSL True PC9_epitope_Rep2 999.5025459394699 999.50144993586 58.184 2 0.17633790385897732 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 11352 7694 DFDTYDDR True NCI_RA007_Epitope_Rep1 1045.39886871657 1045.3977699358602 33.922 2 0.17633621472342426 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H', 'ENST00000479338.5_1_7:73588713-73604094:+|nuORF', 'EIF4H|p.T100Ifs*23|1|0.1|ENSG00000106682|chr7:74189723-74189724|AC/-|frameshift_variant', 'ENST00000489484.5_1_7:73588713-73604262:+|nuORF'] 73817 11100 NHDTGEYVL True PC9_epitope_Rep5 1046.46688870674 1046.4657899358601 47.684 2 0.17633544881299595 0.0006801564359802754 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 38140 7177 HEQLRAVIV True H1975_Epitope_Rep3 1063.61382772395 1063.6127299358602 32.581 2 0.1763346695432432 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 17456 19181 EHGNFLITV True PC9_epitope_Rep1 1028.52909504048 1028.5279899358602 78.574 2 0.1763309603858984 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 91158 18774 RLPETLPSL True PC9_epitope_Rep5 1024.59169529704 1024.5905899358602 77.227 2 0.17633023845722906 0.0006801564359802754 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 73012 9597 NDEELNKLLGK True NCI_RA007_Epitope_Rep5 1271.6721304457099 1271.67049490379 43.557 3 0.17632890457163816 0.0006801564359802754 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 135236 12830 YAYDGKDYLA True PC9_epitope_Rep2 1177.5291546101298 1177.52804993586 54.653 2 0.1763226848543626 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 139704 16331 YTVEDIQRL True PC9_epitope_Rep4 1135.5873381925899 1135.58624993586 70.78 2 0.17632117472871695 0.0006801564359802754 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 14364 12854 DTEFPNFKY True H1975_Epitope_Rep1 1159.51858992643 1159.51748993586 54.512 2 0.17631743329638033 0.0006801564359802754 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1', 'RPA1|p.C503R|1|0.38|ENSG00000132383|chr17:1888807-1888807|T/C|missense_variant'] 4348 5579 AINVNDSVTK True NCI_RA007_Epitope_Rep1 1059.5560380643099 1059.5549499358601 25.767 2 0.17631189141561288 0.0006801564359802754 0.9438714419765777 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 69857 18110 LYANMFERL True PC9_epitope_Rep6 1155.57466533391 1155.5735699358602 82.296 2 0.17629278304657703 0.0006801564359802754 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 69276 19024 LVPEFVHSI True PC9_epitope_Rep2 1039.57023157647 1039.56912993586 78.541 2 0.1762906806683619 0.0006801564359802754 0.9438714419765777 ['ENSG00000115183|ENST00000263635|TANC1', 'nc|ENSG00000115183|Q9C0D5-2|TANC1'] 40747 17090 HTVGELIEV True PC9_epitope_Rep5 995.5287606873098 995.52821496793 70.758 1 0.1762787671653079 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 4321 18095 AILSQFEKV True PC9_epitope_Rep3 1033.5807962601698 1033.5796899358602 74.799 2 0.17627200137802418 0.0006801564359802754 0.9438714419765777 ['ENSG00000162441|ENST00000377223|LZIC', 'nc|ENSG00000162441|Q8WZA0-2|LZIC'] 94901 10185 RYPDRITLI True NCI_RA007_Epitope_Rep4 1145.65569253593 1145.65458993586 46.033 2 0.17626038460454452 0.0006801564359802754 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 91112 9555 RLMNETTAV True PC9_epitope_Rep1 1033.52262976105 1033.5215299358601 41.611 2 0.17625551617078383 0.0006801564359802754 0.9438714419765777 ['ENSG00000164070|ENST00000296464|HSPA4L', 'HSPA4L|p.E307Wfs*8|1|0.14|ENSG00000164070|chr4:127804018-127804039|TTTGAACAACTGTGTGCTTCCC/-|frameshift_variant', 'ENSG00000170606|ENST00000304858|HSPA4'] 133193 4451 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 22.232 2 0.17624411390451347 0.0006801564359802754 0.9438714419765777 ['AluSp_dup17171|chr6:42956085-42956345:+|4.405465577973595|0.2092895351215914|4.4|502.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.0483672628645049|0.0949023208327711|3.47|501.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 126945 7651 VPVLAENYK True H1975_Epitope_Rep3 1031.56514619603 1031.56404993586 34.411 2 0.17624198941861244 0.0006801564359802754 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2', 'nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 108338 3905 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 20.063 2 0.17624056220233938 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 21060 5809 ERDM[Oxidation]SNVSL True PC9_epitope_Rep4 1065.47607387189 1065.4749699358601 29.201 2 0.17624029410966865 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 67515 15404 LTELPPLDDY True H1975_Epitope_Rep1 1174.57577044938 1174.5746699358601 64.522 2 0.17623518529005933 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 37130 14691 GVTDLYYILK True NCI_RA007_Epitope_Rep3 1183.64887581999 1183.6477699358602 65.177 2 0.17623399540069104 0.0006801564359802754 0.9438714419765777 ['ENST00000508918.5_1_4:16504706-16675844:-|nuORF', 'nc|ENSG00000169744|O43679-2|LDB2', 'nc|ENSG00000169744|O43679-3|LDB2', 'ENSG00000169744|ENST00000304523|LDB2'] 3997 8939 AHFQKSYTL True PC9_epitope_Rep1 1093.5556441414901 1093.5545499358602 39.225 2 0.1762327463422086 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000465023.1_1_22:37163271-37171742:-|nuORF', 'ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 110729 10847 TKEVNSGFFY True H1975_Epitope_Rep2 1190.5607890915799 1190.5596899358602 46.752 2 0.17623213721859327 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 135229 12253 YAYDGKDYL True PC9_epitope_Rep6 1106.4920408254197 1106.49094993586 58.509 2 0.17622657523966767 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 123426 12082 VIDWHNYGY True H1975_Epitope_Rep2 1165.51925863277 1165.5181699358602 51.557 2 0.17622522528471327 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000033011|Q9BT22-2|ALG1', 'ENSG00000033011|ENST00000262374|ALG1', 'ALG1-SEC14L5|1|fusion'] 103601 15945 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.59957490379 66.142 3 0.17622402010455446 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 7946 10314 ATDIKITVY True H1975_Epitope_Rep2 1022.5648118428601 1022.56370993586 44.679 2 0.17622185189847106 0.0006801564359802754 0.9438714419765777 ['ENSG00000124596|ENST00000424266|OARD1'] 118738 6798 VEDHQEVLP True H1975_Epitope_Rep2 1064.51383889916 1064.51274993586 31.065 2 0.1762204917147564 0.0006801564359802754 0.9438714419765777 ['ENSG00000082213|ENST00000325366|C5orf22', 'ENST00000511208.2_1_5:31532460-31535865:+|nuORF', 'ENST00000515409.5_1_5:31532460-31534525:+|nuORF'] 73881 10237 NHHLFTTTI True PC9_epitope_Rep6 1082.5508931142201 1082.5497899358602 50.035 2 0.17621685145292904 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 87833 16789 QVISELDKL True PC9_epitope_Rep2 1043.58627556343 1043.5851699358602 69.826 2 0.17621505620269667 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5'] 47684 21339 IYPSPTGVLI True PC9_epitope_Rep5 1058.60119735158 1058.60010993586 87.139 2 0.17621223054402252 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 76575 6459 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.46030993586 29.817 2 0.17620981445736 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 87433 5236 QTEERVQPEY True H1975_Epitope_Rep2 1277.58879474457 1277.58768993586 25.208 2 0.17620664255230784 0.0006801564359802754 0.9438714419765777 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 17615 7591 EHNDLQYAA True PC9_epitope_Rep3 1059.46213767947 1059.46104993586 34.196 2 0.17620327359595142 0.0006801564359802754 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 111087 12734 TLEEDEEELFK True H1975_Epitope_Rep3 1380.6296564970396 1380.62854993586 54.192 2 0.17620323588574363 0.0006801564359802754 0.9438714419765777 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000488484.1_1_22:20105172-20110015:+|nuORF'] 128478 9697 VSEYISSDGSY True H1975_Epitope_Rep3 1205.5088130883698 1205.50770993586 42.321 2 0.17619549432788167 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12'] 90343 15855 RIIDVVYNA True PC9_epitope_Rep2 1061.58694426977 1061.58584993586 66.245 2 0.17619075484138713 0.0006801564359802754 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 65054 5256 LSDLDSETR True NCI_RA007_Epitope_Rep2 1034.48801807414 1034.4869299358602 25.065 2 0.176190313607812 0.0006801564359802754 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000484772.1_1_1:27271971-27272669:+|nuORF'] 96553 12148 SELPGAFEA True NCI_RA007_Epitope_Rep5 919.4287122928699 919.42816496793 53.382 1 0.17618144815369008 0.0006801564359802754 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 53915 6142 KYIHSANVL True NCI_RA007_Epitope_Rep4 1043.57637958607 1043.5752899358602 30.238 2 0.1761745422085294 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 98066 18685 SHVDLVVMV True PC9_epitope_Rep2 997.52665251233 997.52554993586 77.24 2 0.17617198803602785 0.0006801564359802754 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 71323 20205 MHFQLPIQA True PC9_epitope_Rep1 1083.55353596651 1083.5524299358601 82.547 2 0.17616724230455164 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 95067 21852 RYSIAFPLL True PC9_epitope_Rep1 1078.61751612206 1078.61640993586 88.863 2 0.1761646113456717 0.0006801564359802754 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 112056 13047 TLTEEGVIKV True PC9_epitope_Rep6 1087.6124903112698 1087.6113899358602 61.783 2 0.17616268966121182 0.0006801564359802754 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 6619 18384 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 75.732 2 0.17616060546882456 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 40836 13256 HVLDVIHEV True PC9_epitope_Rep6 1059.57129420563 1059.57018993586 62.639 2 0.17615860211282072 0.0006801564359802754 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 74145 10972 NHYNNIM[Oxidation]AL True PC9_epitope_Rep1 1104.50222905008 1104.50112993586 47.093 2 0.17615758282825988 0.0006801564359802754 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 11640 11990 DHASIQMNV True PC9_epitope_Rep5 1013.46002950449 1013.4589299358599 51.115 2 0.17613780684554292 0.0006801564359802754 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 72434 18744 MTISEFDRL True PC9_epitope_Rep4 1110.53794547202 1110.5368499358601 80.182 2 0.17613234906163952 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-4|ABLIM3'] 8742 10177 AVDSLVPIGR True H1975_Epitope_Rep3 1025.58694426977 1025.58584993586 44.19 2 0.17612362058771105 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 1539 6657 AEETPPTSV True H1975_Epitope_Rep2 929.43419159613 929.43308993586 30.514 2 0.17612070195573862 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 95008 20255 RYQFLEEAF True PC9_epitope_Rep1 1201.57677350889 1201.57566993586 82.74 2 0.17611946542643775 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 23740 17787 EYIPKWEQF True PC9_epitope_Rep6 1238.5971746003 1238.5960699358602 81.052 2 0.17611220261916335 0.0006801564359802754 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 21056 6018 ERDM[Oxidation]SNVSL True PC9_epitope_Rep2 1065.47607387189 1065.4749699358601 28.538 2 0.17610778450335599 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 92263 18909 RQLDMELVSV True PC9_epitope_Rep2 1188.61725842188 1188.6161699358602 78.096 2 0.1761070869473127 0.0006801564359802754 0.9438714419765777 ['ENSG00000089902|ENST00000262241|RCOR1'] 104794 8029 STDPSVLGKY True H1975_Epitope_Rep1 1065.5342399905699 1065.5331499358601 35.827 2 0.1761045845374651 0.0006801564359802754 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 53426 5541 KVHVIFNYK True NCI_RA007_Epitope_Rep5 1146.65496425994 1146.65332490379 27.999 3 0.17610457238454016 0.0006801564359802754 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 140846 14615 YYTDIM[Oxidation]HTL True PC9_epitope_Rep2 1171.5219614351497 1171.5208699358602 61.486 2 0.1761039347561925 0.0006801564359802754 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 65584 11953 LSGHLETVILG True H1975_Epitope_Rep1 1137.63937376545 1137.63826993586 50.981 2 0.17609768255056002 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 114192 13685 TRTSQVLVI True PC9_epitope_Rep5 1015.6025943339098 1015.60148993586 57.666 2 0.17609169298658867 0.0006801564359802754 0.9438714419765777 ['ENSG00000147689|ENST00000690554|FAM83A', 'nc|ENSG00000147689|Q86UY5-3|FAM83A', 'ENST00000521468.1_1_8:124195447-124212099:+|nuORF'] 37700 19715 HAMTEFLEV True PC9_epitope_Rep5 1075.50083168731 1075.4997299358602 80.879 2 0.17608500157028686 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 103473 7519 SRAPSQVSI True PC9_epitope_Rep1 943.50869394907 943.50758993586 33.74 2 0.17608462397887825 0.0006801564359802754 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2', 'nc|ENSG00000166833|Q8IVL1-7|NAV2'] 72349 8381 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep1 1128.4645061286797 1128.46340993586 37.165 2 0.1760712976925438 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 11635 12008 DHASIQMNV True PC9_epitope_Rep3 1013.46002950449 1013.4589299358599 51.215 2 0.17606650313915428 0.0006801564359802754 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 24002 14903 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep3 1300.57578791316 1300.57468993586 62.461 2 0.1760632370537033 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 132258 18480 VYKVVGNLL True PC9_epitope_Rep3 1003.6066170851898 1003.60552993586 76.291 2 0.17606312469478178 0.0006801564359802754 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.E1166K|1|0.16|ENSG00000183856|chr1:156535174-156535174|C/T|missense_variant'] 111542 7560 TLLVADPR True NCI_RA007_Epitope_Rep5 883.51271670035 883.51160993586 35.765 2 0.1760630296018844 0.0006801564359802754 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000339471.8_1_19:39923915-39924228:-|nuORF', 'ENST00000602153.5_1_19:39923915-39924074:-|nuORF', 'ENST00000599705.1_1_19:39923915-39924331:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 138935 13809 YSEEIVEMY True H1975_Epitope_Rep3 1161.4899922200898 1161.48888993586 58.421 2 0.1760580743090546 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 9912 12029 AYPHNLMTF True NCI_RA007_Epitope_Rep4 1092.50625142092 1092.5051499358601 53.271 2 0.1760580157511007 0.0006801564359802754 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 111756 11759 TLQKEGVIGV True PC9_epitope_Rep5 1042.6022599807397 1042.60116993586 50.229 2 0.17605790966181675 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 75463 19264 NQIGAKFWEV True PC9_epitope_Rep2 1190.60840799034 1190.60730993586 79.473 2 0.17605529624137725 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 106578 8170 SVYDSVLQK True NCI_RA007_Epitope_Rep3 1037.5393253710097 1037.53822993586 39.257 2 0.176046952046363 0.0006801564359802754 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 107008 16964 SYLKQLPHF True PC9_epitope_Rep1 1131.6076797143498 1131.60604490379 70.074 3 0.1760424845635442 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 131118 14803 VVPAALKVV True PC9_epitope_Rep1 894.59023874506 894.58914993586 61.76 2 0.1760419073564729 0.0006801564359802754 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 89939 19410 RFVNVVPTFG True PC9_epitope_Rep2 1134.6185787512197 1134.61748993586 80.038 2 0.17603851536422616 0.0006801564359802754 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 20087 11507 ENGVYLIDVK True NCI_RA007_Epitope_Rep1 1148.6077392839998 1148.60664993586 48.726 2 0.17603751597517875 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF', 'FLNA|p.R2395Q|1|0.13|ENSG00000196924|chrX:154350180-154350180|C/T|missense_variant'] 21077 8986 ERDMSNVSL True PC9_epitope_Rep6 1049.48115887189 1049.48006993586 44.586 2 0.17603154156397927 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 14812 15333 DYAYLREHF True PC9_epitope_Rep4 1212.5563724174797 1212.55471490379 66.911 3 0.1760308783858697 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 7537 3256 ASFDKAKLK True NCI_RA007_Epitope_Rep4 1006.58113061334 1006.58002993586 18.184 2 0.1760293202540046 0.0006801564359802754 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 95093 14594 RYSVFFQSL True NCI_RA007_Epitope_Rep4 1145.58694426977 1145.58584993586 63.519 2 0.17602891888047695 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6', 'ENST00000497315.5_1_3:64004227-64005057:-|nuORF'] 77396 17780 NYLSIFRKF True PC9_epitope_Rep6 1186.6498788795 1186.6487899358601 81.026 2 0.17602804587579202 0.0006801564359802754 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 48585 5650 KEIEELQSQA True H1975_Epitope_Rep2 1173.58773211541 1173.5866299358602 26.731 2 0.17602784137466798 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 53602 19432 KVVNIVPVI True PC9_epitope_Rep5 979.6430025939098 979.64190993586 79.795 2 0.1760218425072147 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 132302 12356 VYLPGSRQTL True PC9_epitope_Rep4 1132.62405805448 1132.62296993586 55.333 2 0.17602047905860463 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 8691 11119 AVDAVIAELK True H1975_Epitope_Rep1 1027.5913609438699 1027.59026993586 47.734 2 0.1760158995092516 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 7818 13085 ATADYICKV True PC9_epitope_Rep1 982.4793679667399 982.47826993586 55.2 2 0.1760119538271491 0.0006801564359802754 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 102975 6990 SQIQEFKEA True PC9_epitope_Rep6 1078.5294889632999 1078.52838993586 35.863 2 0.17600774339873687 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 113371 20821 TQLESSWEL True PC9_epitope_Rep5 1091.51350454599 1091.5124099358602 85.137 2 0.17600583427954533 0.0006801564359802754 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 136611 13311 YIDAQFEAY True H1975_Epitope_Rep2 1118.49204082542 1118.49147496793 56.33 1 0.1760000657643511 0.0006801564359802754 0.9438714419765777 ['ENSG00000154997|ENST00000388975|SEPTIN14', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11'] 94762 21015 RYLPDTLLL True PC9_epitope_Rep1 1102.63864548946 1102.63754993586 85.663 2 0.17599948139210497 0.0006801564359802754 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 125595 18089 VMAPRALLL True PC9_epitope_Rep4 982.5997578829398 982.59866993586 77.646 2 0.1759964634610919 0.0006801564359802754 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 75425 13546 NQFPGFKEV True PC9_epitope_Rep6 1064.52909504048 1064.5279899358602 63.836 2 0.17599487286721963 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 21424 14386 ERNPTQFQL True PC9_epitope_Rep5 1131.5672714543498 1131.5661699358602 60.336 2 0.17598688461115397 0.0006801564359802754 0.9438714419765777 ['ENST00000582655.5_1_17:27237828-27251299:-|nuORF', 'nc|ENSG00000109118|Q96QT6-2|PHF12', 'ENST00000582436.5_1_17:27237055-27251401:-|nuORF', 'nc|ENSG00000109118|Q96QT6-5|PHF12', 'nc|ENSG00000109118|Q96QT6-3|PHF12', 'ENSG00000109118|ENST00000332830|PHF12'] 91250 13727 RLTEEFQNV True PC9_epitope_Rep3 1134.56693710118 1134.5658499358601 57.884 2 0.1759860596487042 0.0006801564359802754 0.9438714419765777 ['ENST00000486040.1_1_7:2274759-2277695:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000467199.5_1_7:2274759-2281791:-|nuORF'] 83293 6352 QAIATREEL True NCI_RA007_Epitope_Rep4 1029.5454733806098 1029.54436993586 31.039 2 0.17598304601277362 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000289701|Q9H257-2|CARD9', 'ENSG00000187796|ENST00000371732|CARD9', 'ENST00000485975.1_1_9:139261944-139262364:-|nuORF', 'ENST00000481053.5_1_9:139259475-139262364:-|nuORF', 'ENST00000489932.2_1_9:139258756-139262364:-|nuORF'] 127550 20066 VQVPVPVTV True PC9_epitope_Rep5 936.5644179200399 936.56332993586 82.237 2 0.17598189273574183 0.0006801564359802754 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 34740 5006 GQNPTNAEVLK True NCI_RA007_Epitope_Rep5 1169.6040508858898 1169.6029499358601 25.96 2 0.17597768594542493 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 31467 6872 GEEEVGPVA True H1975_Epitope_Rep2 885.4079768482898 885.4074249679301 31.352 1 0.1759771614513278 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 95978 11975 SEAEIFYNA True H1975_Epitope_Rep1 1042.46074069714 1042.4596499358602 51.067 2 0.17597560555408334 0.0006801564359802754 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 135721 4068 YEKDDKLTP True NCI_RA007_Epitope_Rep4 1107.54480467427 1107.54370993586 21.92 2 0.17597497295541295 0.0006801564359802754 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 54032 12908 KYLSGIAHF True PC9_epitope_Rep2 1034.5549158654999 1034.55380993586 54.947 2 0.17596968264960686 0.0006801564359802754 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 14685 9629 DVNQQEFVR True PC9_epitope_Rep5 1133.5465360097699 1133.54542993586 42.002 2 0.17596869855168773 0.0006801564359802754 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 46175 15960 ITDFSPEWSY True H1975_Epitope_Rep2 1243.5397192938299 1243.5386299358602 66.588 2 0.17596842208393074 0.0006801564359802754 0.9438714419765777 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2'] 998 8156 AEAEFYRQV True H1975_Epitope_Rep3 1111.5298233164701 1111.5287299358602 36.351 2 0.17596226969526302 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENST00000442018.5_2_X:39911364-39913101:-|nuORF'] 94808 6033 RYLSKATTL True NCI_RA007_Epitope_Rep4 1051.60259433391 1051.6014899358602 29.823 2 0.17595859212119408 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130177|Q13042-4|CDC16', 'nc|ENSG00000130177|Q13042-3|CDC16', 'nc|ENSG00000130177|Q13042-2|CDC16', 'ENSG00000130177|ENST00000356221|CDC16'] 107704 16884 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.5744349679301 70.191 1 0.1759536018405314 0.0006801564359802754 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 1902 7867 AEILNGKEISA True H1975_Epitope_Rep2 1143.61355294043 1143.61244993586 35.206 2 0.1759506953541014 0.0006801564359802754 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 53092 7716 KSDVEAIFSK True NCI_RA007_Epitope_Rep4 1122.5920892198599 1122.59098993586 36.351 2 0.17593869480820734 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 119086 4819 VEHSDLSFSK True NCI_RA007_Epitope_Rep5 1147.5509526838698 1147.54930490379 25.224 3 0.17593864721223246 0.0006801564359802754 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 89325 9066 RELVKNWVP True NCI_RA007_Epitope_Rep4 1139.64512785223 1139.64402993586 41.705 2 0.17593346647606523 0.0006801564359802754 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 28478 4730 FSETGGGEKY True H1975_Epitope_Rep3 1073.4665543535698 1073.46544993586 23.319 2 0.17592705167421308 0.0006801564359802754 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 92338 6269 RQNVAVNEL True NCI_RA007_Epitope_Rep5 1041.55670677065 1041.55560993586 30.793 2 0.17592681314231104 0.0006801564359802754 0.9438714419765777 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX'] 75778 4363 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 23.875 2 0.17592403074387325 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 67612 4851 LTEVNKAGTQY True H1975_Epitope_Rep2 1222.61936659686 1222.61826993586 23.747 2 0.17592298453205243 0.0006801564359802754 0.9438714419765777 ['ENSG00000170542|ENST00000380698|SERPINB9'] 25538 8942 FEQKGFRLV True H1975_Epitope_Rep2 1122.6185787512197 1122.61693490379 39.356 3 0.17592208668426607 0.0006801564359802754 0.9438714419765777 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF', 'NMT1-NME1|1|fusion'] 91545 17208 RPADVIFATV True PC9_epitope_Rep6 1087.60259433391 1087.6014899358602 78.779 2 0.17591993523972904 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 3236 4857 AGFAGDDAPR True NCI_RA007_Epitope_Rep5 975.4410083120698 975.43990993586 25.374 2 0.1759149880800078 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 93720 5986 RTQGLMIMK True NCI_RA007_Epitope_Rep5 1076.5834561957997 1076.58234993586 29.708 2 0.17589842268761333 0.0006801564359802754 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1', 'nc|ENSG00000137275|Q13546-2|RIPK1'] 88031 9183 QVTDFGFAK True NCI_RA007_Epitope_Rep3 1011.5025459394698 1011.50144993586 43.211 2 0.1758903261645697 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072062|P17612-2|PRKACA', 'ENSG00000072062|ENST00000308677|PRKACA', 'ENST00000536649.5_1_19:14208073-14223129:-|nuORF', 'nc|ENSG00000142875|P22694-10|PRKACB', 'nc|ENSG00000142875|P22694-4|PRKACB', 'nc|ENSG00000142875|P22694-3|PRKACB', 'nc|ENSG00000142875|P22694|PRKACB', 'nc|ENSG00000142875|P22694-5|PRKACB', 'nc|ENSG00000142875|P22694-7|PRKACB', 'nc|ENSG00000142875|P22694-6|PRKACB', 'nc|ENSG00000142875|P22694-9|PRKACB', 'ENST00000587533.1_1_19:14208360-14208546:-|nuORF', 'nc|ENSG00000142875|P22694-8|PRKACB', 'ENSG00000165059|ENST00000377276|PRKACG', 'ENSG00000142875|ENST00000370685|PRKACB'] 40081 17355 HRDDELYIL True PC9_epitope_Rep1 1172.5825871653199 1172.5814899358602 71.567 2 0.17588793692363333 0.0006801564359802754 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 76463 6603 NTDDTIGDLK True H1975_Epitope_Rep3 1090.51423282198 1090.5131299358602 30.35 2 0.1758848079918622 0.0006801564359802754 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5', 'ENST00000589372.1_1_19:9939013-9939570:+|nuORF'] 84830 10699 QHLQATGVSL True PC9_epitope_Rep2 1052.56145779792 1052.56036993586 46.467 2 0.1758835829001361 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 135373 15087 YDGIILPGK True PC9_epitope_Rep5 974.54368247546 974.54258993586 63.039 2 0.17588357371266503 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 105355 17659 STYEGKPIFL True PC9_epitope_Rep1 1153.60192562757 1153.60082993586 72.72 2 0.17588163708115742 0.0006801564359802754 0.9438714419765777 ['ENSG00000132623|ENST00000378392|ANKEF1'] 55632 5931 LDADPSLQR True H1975_Epitope_Rep3 1013.51417325233 1013.51306993586 27.822 2 0.17587820368902052 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 92179 9857 RQFLESSEL True NCI_RA007_Epitope_Rep4 1107.5560380643099 1107.5549499358601 44.76 2 0.1758771600201047 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 1966 5802 AEIRAINEA True NCI_RA007_Epitope_Rep4 985.51925863277 985.51816993586 28.942 2 0.17587537917669313 0.0006801564359802754 0.9438714419765777 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 8447 7371 ATSPALFNR True NCI_RA007_Epitope_Rep4 975.51377932951 975.51268993586 34.993 2 0.17587219126454706 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 114837 11917 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.49807496793 50.918 1 0.17587192690646927 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 87490 9001 QTFLLQTTK True NCI_RA007_Epitope_Rep4 1078.60225998074 1078.60116993586 41.455 2 0.1758634495542395 0.0006801564359802754 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 113772 9447 TRDPQVNAF True PC9_epitope_Rep3 1046.5145076054998 1046.5134099358602 41.279 2 0.17586004083342258 0.0006801564359802754 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 119127 6955 VEILANDQGNR True PC9_epitope_Rep2 1227.6207635791898 1227.6196699358602 32.151 2 0.17585521395717485 0.0006801564359802754 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 108421 8458 TEEEQIAYA True H1975_Epitope_Rep2 1052.4662200003997 1052.4651299358602 37.486 2 0.17585420846959673 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 26100 8539 FHEPSQEL True PC9_epitope_Rep4 985.4505103666098 985.44940993586 40.324 2 0.17585345854963016 0.0006801564359802754 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 37535 19251 GYLPNQLFRTF True PC9_epitope_Rep6 1354.70337100434 1354.7022699358602 86.699 2 0.1758525148154034 0.0006801564359802754 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 28935 11376 FTEPNEISQY True H1975_Epitope_Rep2 1226.54553295026 1226.54442993586 48.807 2 0.17585043032722905 0.0006801564359802754 0.9438714419765777 ['ENSG00000143155|ENST00000367833|TIPRL'] 89278 6429 RELEQRVSL True NCI_RA007_Epitope_Rep4 1128.62512068364 1128.6234749037899 31.33 3 0.1758493463826905 0.0006801564359802754 0.9438714419765777 ['TAOK1|p.G928Vfs*42|1|0.31|ENSG00000160551|chr17:29542799-29542801|GCC/TT|frameshift_variant', 'ENSG00000160551|ENST00000261716|TAOK1', 'TAOK1|p.R841Q|1|0.16|ENSG00000160551|chr17:29534278-29534278|G/A|missense_variant', 'nc|ENSG00000160551|Q7L7X3-3|TAOK1'] 39795 20308 HQDSTWIVL True PC9_epitope_Rep3 1097.55055876105 1097.54946993586 83.362 2 0.17584801258513943 0.0006801564359802754 0.9438714419765777 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 96923 4011 SETSGIARP True NCI_RA007_Epitope_Rep4 916.4614094034799 916.46030993586 21.685 2 0.17584755507347752 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 44141 19030 ILPKELQTW True PC9_epitope_Rep5 1126.6386454894598 1126.63754993586 78.227 2 0.1758473892102077 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 12381 10238 DKDDTQQIL True PC9_epitope_Rep5 1074.51931820242 1074.51822993586 44.367 2 0.17583993125861389 0.0006801564359802754 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 28830 11881 FTDIDGQVY True H1975_Epitope_Rep2 1056.4763907612798 1056.47528993586 50.78 2 0.17582366912572117 0.0006801564359802754 0.9438714419765777 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 116268 10584 TVVERLVKV True PC9_epitope_Rep4 1041.65462990677 1041.6535299358602 48.452 2 0.1758139076238023 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000562408.1_1_16:28128533-28137161:-|nuORF'] 95005 12546 RYQDIIHSI True PC9_epitope_Rep6 1143.6036569630699 1143.60254993586 59.694 2 0.17581302304479668 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 136543 14622 YHSEVPVSL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 61.066 2 0.175811808912057 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 89788 16534 RFEEAHFTF True PC9_epitope_Rep5 1182.5458077337796 1182.54415490379 68.6 3 0.17581061424810923 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 97873 19156 SHLDYDITL True PC9_epitope_Rep5 1075.5185899264302 1075.51748993586 78.72 2 0.1758083852607618 0.0006801564359802754 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 8132 9532 ATETQPIVY True H1975_Epitope_Rep3 1020.5127762699997 1020.51166993586 41.672 2 0.17580576851204363 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 70580 21977 LYYDAIWHF True PC9_epitope_Rep2 1226.5760452328998 1226.57494993586 90.011 2 0.17579706458608466 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 104208 7085 SSDKSGMIEY True H1975_Epitope_Rep2 1115.48049016555 1115.4793899358601 32.183 2 0.17578897657205889 0.0006801564359802754 0.9438714419765777 ['PPWD1|p.V596*|1|0.26|ENSG00000113593|chr5:65586169-65586169|G/-|frameshift_variant', 'ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 31426 5356 GEDLTKNHDEL True NCI_RA007_Epitope_Rep4 1269.58370936413 1269.58207490379 27.169 3 0.1757886153840608 0.0006801564359802754 0.9438714419765777 ['ENSG00000049449|ENST00000054950|RCN1', 'nc|ENSG00000049449|Q15293-2|RCN1'] 28770 15009 FTDAGLKEL True PC9_epitope_Rep5 992.51786165044 992.51676993586 62.735 2 0.17578536015531035 0.0006801564359802754 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 35317 12912 GSVDGVIKEV True PC9_epitope_Rep2 1001.5393253710099 1001.53822993586 54.962 2 0.17577547911588212 0.0006801564359802754 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 132393 12435 VYNENLVHMI True NCI_RA007_Epitope_Rep5 1230.60669373818 1230.60558993586 54.488 2 0.17577149095423536 0.0006801564359802754 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 109956 7962 THSLETQEL True PC9_epitope_Rep2 1056.5087535187201 1056.5076499358602 35.989 2 0.17577110217618788 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 95135 14424 RYYLKFNFL True NCI_RA007_Epitope_Rep4 1262.6811790077797 1262.68008993586 62.813 2 0.17577076304581465 0.0006801564359802754 0.9438714419765777 ['ENSG00000178695|ENST00000377474|KCTD12'] 6388 21234 APRTVLLLLSA True PC9_epitope_Rep1 1152.7230438197598 1152.72194993586 86.5 2 0.17576850058511226 0.0006801564359802754 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 139952 19176 YVIEDDVNM True PC9_epitope_Rep5 1096.47467650912 1096.47356993586 78.797 2 0.17575376793237063 0.0006801564359802754 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 134818 18941 WYQTKFETL True PC9_epitope_Rep5 1214.5971746002997 1214.5966749679299 77.881 1 0.17574740120411397 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 112990 15710 TPSPLPTV True PC9_epitope_Rep5 810.4487194614601 810.44762993586 65.432 2 0.17574495233488388 0.0006801564359802754 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 53901 20391 KYIENLDNITF True PC9_epitope_Rep3 1368.6925315371197 1368.69142993586 83.685 2 0.17573478034926696 0.0006801564359802754 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16'] 131815 19753 VYAPPVGGF True PC9_epitope_Rep5 905.4647038787698 905.46360993586 81.026 2 0.17573150571463098 0.0006801564359802754 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 94767 18257 RYLPKGFLNQF True PC9_epitope_Rep4 1381.7506555499297 1381.7490149037899 78.297 3 0.1757309421271328 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 32965 12425 GISRQGIIAV True PC9_epitope_Rep4 1012.6029286870798 1012.60182993586 55.597 2 0.1757278253865175 0.0006801564359802754 0.9438714419765777 ['ENSG00000005100|ENST00000225296|DHX33'] 94690 10179 RYLEKPMEI True PC9_epitope_Rep6 1177.6165301458898 1177.6154299358602 49.787 2 0.1757264541100868 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 60370 18910 LIIDENGVHEL True PC9_epitope_Rep2 1250.65066672514 1250.6495699358602 78.1 2 0.17571999958875337 0.0006801564359802754 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 116586 20145 TYGEIFEKF True PC9_epitope_Rep1 1132.54407639828 1132.54357496793 82.317 1 0.17571991598157058 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 36419 19984 GVIEKLLTS True PC9_epitope_Rep1 958.5698972233 958.56880993586 81.693 2 0.17571313891732893 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 33192 7149 GKWGAKIVM True NCI_RA007_Epitope_Rep3 988.5528076905199 988.55170993586 35.238 2 0.17571190513198437 0.0006801564359802754 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 76565 6412 NTDSPLRY True H1975_Epitope_Rep1 964.46140940348 964.46030993586 29.722 2 0.17571175744036743 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 75668 16661 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53856993586 68.915 2 0.1757046183464812 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 86940 7368 QRSQTQTIL True PC9_epitope_Rep1 1073.58292151849 1073.58182993586 33.154 2 0.175694044312214 0.0006801564359802754 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1'] 130600 16938 VVAEELENV True PC9_epitope_Rep1 1000.50769088956 1000.50658993586 69.975 2 0.17568260873303 0.0006801564359802754 0.9438714419765777 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.R96H|1|0.24|ENSG00000167196|chr15:75913210-75913210|G/A|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 7205 15427 ARDFTVSAL True PC9_epitope_Rep3 978.5134449763399 978.51234993586 64.495 2 0.1756792611270676 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 90896 13724 RLDAVTLLY True H1975_Epitope_Rep3 1062.60734536118 1062.6062499358602 58.086 2 0.17567658799273506 0.0006801564359802754 0.9438714419765777 ['ENSG00000100036|ENST00000343605|SLC35E4'] 82144 7761 PTDPKVVVY True H1975_Epitope_Rep2 1016.5542471591598 1016.55314993586 34.804 2 0.1756752244084718 0.0006801564359802754 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 76354 9445 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.4600299358601 41.298 2 0.17567375756771977 0.0006801564359802754 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 9952 7970 AYRQGHFTY True PC9_epitope_Rep1 1141.53049202281 1141.52938993586 35.478 2 0.17566421194356488 0.0006801564359802754 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 73814 9774 NHDTGEYVL True PC9_epitope_Rep4 1046.46688870674 1046.4657899358601 45.236 2 0.17565931667679893 0.0006801564359802754 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 94949 12424 RYPSNLQLF True NCI_RA007_Epitope_Rep3 1136.59784330664 1136.59674993586 56.083 2 0.17565757149295785 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 47357 15522 IYHTGTFAQI True PC9_epitope_Rep1 1149.5818588893299 1149.5807699358602 64.528 2 0.17565556139886984 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'ENST00000587552.5_1_19:5708410-5719801:-|nuORF'] 84131 7948 QEQPVVNAV True H1975_Epitope_Rep2 982.5083595958998 982.50726993586 35.521 2 0.17562095173775702 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119689|P36957-2|DLST', 'ENSG00000119689|ENST00000334220|DLST'] 139946 17951 YVIDPIKGLKL True PC9_epitope_Rep6 1257.7696596590097 1257.7680149037901 81.676 3 0.17561753511521286 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 132971 20165 VYVDDIYVI True PC9_epitope_Rep6 1097.56447748969 1097.5633899358602 90.238 2 0.17561348382788608 0.0006801564359802754 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 75483 19394 NQINGSFAL True PC9_epitope_Rep1 962.48214484806 962.48104993586 79.41 2 0.17561260179228017 0.0006801564359802754 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 73969 12485 NHNIYITEV True PC9_epitope_Rep4 1101.54547338061 1101.54436993586 55.83 2 0.1756102365213226 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'AMBRA1|p.W132Cfs*22|1|0.22|ENSG00000110497|chr11:46545759-46545759|C/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 136507 17903 YHLDSSGSYVF True PC9_epitope_Rep2 1273.5615173675699 1273.5604299358602 74.167 2 0.1756100067439389 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 83912 9613 QEISHLIEP True NCI_RA007_Epitope_Rep5 1064.55022440788 1064.54912993586 43.619 2 0.1756018183595471 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 107111 19579 SYMGHFDLL True PC9_epitope_Rep4 1081.49026700361 1081.4891699358602 83.433 2 0.17560105863837702 0.0006801564359802754 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 71703 4684 M[Oxidation]MDPNSTQRY True H1975_Epitope_Rep2 1257.51180775761 1257.5107099358602 23.113 2 0.17559949449490506 0.0006801564359802754 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 77577 18973 NYSPYVNYF True PC9_epitope_Rep6 1165.50802524273 1165.5069299358602 85.624 2 0.1755977159826628 0.0006801564359802754 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 77344 21832 NYLDRFLSL True PC9_epitope_Rep2 1139.59750895347 1139.59640993586 89.452 2 0.17559741501943796 0.0006801564359802754 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 116925 14802 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47054993586 61.935 2 0.17559330255436215 0.0006801564359802754 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 21070 10966 ERDMSNVSL True PC9_epitope_Rep3 1049.48115887189 1049.48006993586 47.164 2 0.17559328789755327 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 116578 13479 TYGEIFEKF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.54357496793 59.054 1 0.17558820048345086 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 117004 10516 TYQDIQNTI True NCI_RA007_Epitope_Rep4 1094.52440358286 1094.5233099358602 47.297 2 0.17557280506252232 0.0006801564359802754 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 17345 10584 EHDPVGQMV True PC9_epitope_Rep3 1010.44913046762 1010.44802993586 45.657 2 0.1755663380402728 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 30324 8598 GADPRAISL True H1975_Epitope_Rep2 898.4872302284999 898.48612993586 38.026 2 0.17556623467189747 0.0006801564359802754 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 96172 13462 SEEFPSFGA True H1975_Epitope_Rep2 969.4079768482899 969.40686993586 56.915 2 0.17556228357991902 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 127050 17592 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 72.946 2 0.17555972614632268 0.0006801564359802754 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 40380 16567 HRTEMDWVL True PC9_epitope_Rep2 1185.5600778989299 1185.55843490379 68.962 3 0.17555854845435664 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 110653 19173 TIVNELVRV True PC9_epitope_Rep5 1041.61824439805 1041.6171499358602 78.786 2 0.17555528791955033 0.0006801564359802754 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 32705 9713 GHSGDVMSL True PC9_epitope_Rep2 901.3963666187701 901.39526993586 42.698 2 0.17555123430768618 0.0006801564359802754 0.9438714419765777 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'GNB2|p.A181V|1|0.43|ENSG00000172354|chr7:100678142-100678142|C/T|missense_variant', 'ENSG00000114450|ENST00000232564|GNB4'] 6596 18904 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 77.499 2 0.1755511257135632 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 30306 13310 GAAVDEYFR True PC9_epitope_Rep1 1026.47705946762 1026.4759699358601 56.059 2 0.175551000923995 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 106338 9800 SVSDLFNTK True NCI_RA007_Epitope_Rep4 1009.50802524273 1009.50692993586 44.544 2 0.17554779787721453 0.0006801564359802754 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 115246 13930 TVDEHVWFY True H1975_Epitope_Rep2 1194.53457434374 1194.53346993586 58.73 2 0.17554761125778343 0.0006801564359802754 0.9438714419765777 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 67120 11338 LTDDGNKWLY True H1975_Epitope_Rep2 1223.58225281215 1223.5811499358601 48.66 2 0.17554748017468297 0.0006801564359802754 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 75979 11422 NRHYYSITI True PC9_epitope_Rep4 1165.58800689893 1165.5869099358601 51.703 2 0.17554522719806542 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 54207 16225 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 71.51 2 0.1755430467866987 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 137171 15226 YLDQMEDLY True H1975_Epitope_Rep2 1188.50089125696 1188.50037496793 63.724 1 0.17552962506043196 0.0006801564359802754 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3'] 93708 17063 RTMENLVEL True PC9_epitope_Rep2 1103.5644945730298 1103.5633899358602 70.884 2 0.17552200487852063 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 28523 8233 FSHAQTVVL True NCI_RA007_Epitope_Rep5 1000.5341804209199 1000.53308993586 38.348 2 0.17550754821562004 0.0006801564359802754 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 139369 5151 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.45996993586 24.89 2 0.17550696550920392 0.0006801564359802754 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 106493 19826 SVVKVLTEL True PC9_epitope_Rep1 986.6011973515799 986.60010993586 81.075 2 0.17550290038012828 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 73793 10452 NHDTALTL True PC9_epitope_Rep1 883.43994568291 883.43884993586 45.091 2 0.1755023290771459 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 106113 13031 SVNGVFKEV True PC9_epitope_Rep1 977.5181960036099 977.51708993586 54.993 2 0.1754944506715637 0.0006801564359802754 0.9438714419765777 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'ENST00000533440.1_1_11:62562405-62563999:-|nuORF', 'ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'ENSG00000162231|ENST00000294172|NXF1'] 23897 8118 EYMKHTRLF True PC9_epitope_Rep6 1223.6121134717898 1223.61046490379 40.761 3 0.1754932923864924 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 89784 16975 RFEEAHFTF True PC9_epitope_Rep3 1182.5458077337796 1182.54415490379 70.454 3 0.17549209021483841 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 29293 20672 FVDPAQITM True PC9_epitope_Rep5 1020.49501803088 1020.49392993586 84.57 2 0.17548555067456764 0.0006801564359802754 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 54327 16550 KYQDVYVEL True PC9_epitope_Rep2 1155.5811901829898 1155.58008993586 68.898 2 0.17548299968638345 0.0006801564359802754 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 103714 6127 SREESAGPAL True PC9_epitope_Rep1 1015.4934378077497 1015.49234993586 28.383 2 0.17548091553773068 0.0006801564359802754 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 42718 12392 IEYPTLHVV True H1975_Epitope_Rep2 1069.58079626017 1069.5796899358602 52.751 2 0.17547248317244535 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117174|Q9NWK9-2|ZNHIT6', 'ENSG00000117174|ENST00000370574|ZNHIT6'] 75649 20607 NQSELAVLL True PC9_epitope_Rep4 985.5444107514498 985.5438649679301 87.418 1 0.17547177330960217 0.0006801564359802754 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 7985 5691 ATDMPVKNQY True H1975_Epitope_Rep2 1165.54375912845 1165.5426699358602 26.888 2 0.17547042951581396 0.0006801564359802754 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 18293 9081 EITALAPSTMK True NCI_RA007_Epitope_Rep1 1160.61111041228 1160.61000993586 39.323 2 0.17546901281787733 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 96251 9190 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 40.302 1 0.17546145197864726 0.0006801564359802754 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 24365 18325 FAEGFVRAL True PC9_epitope_Rep4 1008.5392658013598 1008.53816993586 78.555 2 0.17546124928252815 0.0006801564359802754 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 86795 13458 QRNPQGFVL True PC9_epitope_Rep1 1057.5668775315298 1057.56578993586 56.624 2 0.1754604791120351 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 76222 15918 NRYEDALVL True PC9_epitope_Rep4 1091.56112344475 1091.56002993586 69.155 2 0.1754564279956882 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000567842.5_1_16:28138076-28157497:-|nuORF'] 64011 4268 LQDAEIAR True NCI_RA007_Epitope_Rep3 914.4821448480599 914.48104993586 23.486 2 0.17545539509798516 0.0006801564359802754 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 61251 18654 LLDRFLATV True PC9_epitope_Rep6 1046.61243074162 1046.61132993586 84.396 2 0.17545291619911849 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 54599 10386 LADDSVRSL True PC9_epitope_Rep5 974.50327421546 974.50216993586 44.933 2 0.17544994060615215 0.0006801564359802754 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 2387 11469 AEQIVPLSA True H1975_Epitope_Rep1 926.5072969667399 926.50618993586 49.098 2 0.17544286167036968 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 120515 22395 VFYPYPQYF True PC9_epitope_Rep1 1222.5698972232997 1222.56937496793 90.96 1 0.1754308694796627 0.0006801564359802754 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 97867 18538 SHLDYDITL True PC9_epitope_Rep2 1075.5185899264302 1075.51748993586 76.656 2 0.17542071297205966 0.0006801564359802754 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 113991 19290 TRLPEFSEL True PC9_epitope_Rep5 1090.56587447202 1090.56476993586 79.242 2 0.17541445985010884 0.0006801564359802754 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 88379 11611 QYNPKFQTL True PC9_epitope_Rep4 1137.58185888933 1137.5807699358602 52.422 2 0.17540914408043717 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 26874 17254 FLFELPSRL True H1975_Epitope_Rep2 1120.62808080576 1120.6269899358601 71.658 2 0.17540539173451278 0.0006801564359802754 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51'] 139309 8637 YTDMESEDY True H1975_Epitope_Rep3 1151.39648575807 1151.39597496793 38.218 1 0.17540468193746822 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 132789 17840 VYSQIPAAVKL True PC9_epitope_Rep1 1187.6914093383098 1187.6903099358601 73.415 2 0.17540460097950025 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 103551 11385 SRDDTTLNAL True PC9_epitope_Rep3 1104.54111627616 1104.54000993586 48.795 2 0.17540398947143251 0.0006801564359802754 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 140648 20418 YYPEHFTLL True PC9_epitope_Rep5 1181.57571087973 1181.57460993586 83.573 2 0.17539350780966895 0.0006801564359802754 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10'] 84969 10742 QIDPSIQRV True PC9_epitope_Rep1 1054.57710786206 1054.5760099358602 46.206 2 0.1753877385581657 0.0006801564359802754 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant'] 48708 4538 KEMPTVAQA True NCI_RA007_Epitope_Rep3 973.4902670036098 973.48916993586 24.719 2 0.17538020676950203 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 43443 11359 IHSSETLTL True PC9_epitope_Rep2 999.52367530687 999.52256993586 49.014 2 0.17537836377730032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 70162 21399 LYLEPQGTLF True PC9_epitope_Rep4 1179.6175756917098 1179.61646993586 90.482 2 0.17536117875598378 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2'] 72367 9114 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46340993586 40.046 2 0.17536070190828199 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 31090 10897 GAYKYIQEL True H1975_Epitope_Rep2 1083.56006081559 1083.5589699358602 46.945 2 0.1753599952424444 0.0006801564359802754 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 139445 15378 YTESFPDLY True H1975_Epitope_Rep2 1133.49170647225 1133.4906099358602 64.311 2 0.17535650403507674 0.0006801564359802754 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant'] 2877 5021 AEYNGRLAA True NCI_RA007_Epitope_Rep5 963.4773938207899 963.47628993586 26.016 2 0.17535575274836612 0.0006801564359802754 0.9438714419765777 ['ENSG00000101413|ENST00000373433|RPRD1B'] 137115 15089 YLDDPTNSWY True H1975_Epitope_Rep3 1272.52988288612 1272.52937496793 63.436 1 0.17535527436510764 0.0006801564359802754 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 17506 9488 EHINEGETAM[Oxidation]L True PC9_epitope_Rep1 1258.5499670881397 1258.54886993586 41.352 2 0.17535451198930033 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 8413 6753 ATQSFSTFR True NCI_RA007_Epitope_Rep3 1043.50360856863 1043.5025099358602 33.654 2 0.17535256894248333 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7'] 15109 11350 EADVAQLEY True H1975_Epitope_Rep3 1036.47130538084 1036.47020993586 48.769 2 0.1753510904223436 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 44101 8633 ILMEHIHKL True PC9_epitope_Rep6 1132.64268532408 1132.64104490379 43.024 3 0.17534011410542225 0.0006801564359802754 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 54237 21808 KYPENFFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 89.183 2 0.17534009805329456 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 109598 13002 THDEAINVL True PC9_epitope_Rep5 1010.5032742154599 1010.50216993586 55.02 2 0.17533524118309932 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 53953 19938 KYITDWQNVF True PC9_epitope_Rep4 1312.6451874218799 1312.6440899358602 84.827 2 0.17533295515635086 0.0006801564359802754 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 114436 7944 TSDYVSQSY True H1975_Epitope_Rep2 1048.43491987212 1048.43437496793 35.504 1 0.17533037820649458 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 97690 11378 SHDSTSQLYTV True PC9_epitope_Rep1 1236.5622456435601 1236.5611499358602 48.647 2 0.17532900526162817 0.0006801564359802754 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 113802 19600 TRDSTFVFM True PC9_epitope_Rep5 1102.5117307241799 1102.5106299358602 80.444 2 0.17532235879921215 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 47475 12235 IYKDYQYYF True NCI_RA007_Epitope_Rep3 1301.59684024713 1301.59574993586 55.272 2 0.17531173303102965 0.0006801564359802754 0.9438714419765777 ['ENSG00000260314|ENST00000569591|MRC1'] 54183 8759 KYPDRVPVI True NCI_RA007_Epitope_Rep2 1085.62332977849 1085.62222993586 38.716 2 0.1753017637005616 0.0006801564359802754 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 9544 10976 AYAIIKEEL True NCI_RA007_Epitope_Rep4 1048.580461907 1048.57936993586 49.088 2 0.17530138259961725 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 41418 11479 IASPEGQDYLK True PC9_epitope_Rep3 1219.6084675599898 1219.60736993586 49.15 2 0.17529594243229338 0.0006801564359802754 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 18397 19985 EKDPSYFVF True PC9_epitope_Rep2 1130.5284263341398 1130.52732993586 82.274 2 0.17529484643702312 0.0006801564359802754 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 71375 9556 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep3 983.4269984211501 983.42644496793 41.765 1 0.17529204149806732 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 99913 23103 SLIADLEQL True PC9_epitope_Rep5 1000.5440763982799 1000.54296993586 93.852 2 0.17529030424361125 0.0006801564359802754 0.9438714419765777 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 115810 9799 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep2 1134.59546072858 1134.5943699358602 43.029 2 0.1752898588767649 0.0006801564359802754 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 105347 7173 STWEGIQAGK True NCI_RA007_Epitope_Rep4 1075.5298233164697 1075.5287299358602 34.214 2 0.17528594583733206 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 110117 9098 TIAQDYGVLK True H1975_Epitope_Rep1 1106.5971746003 1106.5960699358602 39.899 2 0.17528274586016854 0.0006801564359802754 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 97656 9283 SHDDGNIDL True PC9_epitope_Rep1 984.41485313388 984.41374993586 40.561 2 0.1752715112260037 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 45369 9830 ISDLIRDSY True H1975_Epitope_Rep2 1080.54513902744 1080.5440499358601 42.797 2 0.17526707667968447 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 138908 9811 YSEDHIIGAY True H1975_Epitope_Rep2 1166.5244035828598 1166.5233099358602 42.724 2 0.1752641620690517 0.0006801564359802754 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 140086 14132 YVPETVYRV True PC9_epitope_Rep1 1124.5866099165999 1124.58550993586 59.184 2 0.17525036820220063 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 14245 4652 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 22.18 2 0.175247504888021 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 26950 21370 FLIQHLPLV True PC9_epitope_Rep3 1078.65390163078 1078.6528099358602 87.498 2 0.17524257628757642 0.0006801564359802754 0.9438714419765777 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 138020 21368 YQDEVFGGF True PC9_epitope_Rep3 1060.4501760134397 1060.44967496793 87.491 1 0.1752389607861907 0.0006801564359802754 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 136644 17405 YIDPSGFVKA True PC9_epitope_Rep1 1095.5600608155898 1095.5589699358602 71.748 2 0.17523685400278496 0.0006801564359802754 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48', 'nc|ENSG00000090686|Q86UV5-4|USP48', 'nc|ENSG00000090686|Q86UV5-7|USP48'] 28857 9426 FTDPRTMGY True H1975_Epitope_Rep1 1086.4804305958999 1086.47932993586 41.17 2 0.17519788137651038 0.0006801564359802754 0.9438714419765777 ['ENSG00000140650|ENST00000268261|PMM2', 'ENST00000567697.1_1_16:8904837-8941679:+|nuORF'] 98539 13922 SILPAIFQK True NCI_RA007_Epitope_Rep5 1015.6066170851899 1015.60552993586 60.235 2 0.17518918386013946 0.0006801564359802754 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 32496 9495 GGNFGFGDSR True PC9_epitope_Rep2 1012.4362572847999 1012.43516993586 41.866 2 0.1751819022999943 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 70097 20799 LYIQTDHLFF True PC9_epitope_Rep4 1295.6550238295897 1295.65392993586 88.151 2 0.17518150543759953 0.0006801564359802754 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 14377 8644 DTENQTLNY True H1975_Epitope_Rep2 1096.46728262956 1096.46618993586 38.207 2 0.17518098568145032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217'] 12621 8129 DLEDSLAR True H1975_Epitope_Rep3 917.4454249861699 917.44432993586 36.245 2 0.1751731982972998 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 113732 18166 TRDEYLSLVA True PC9_epitope_Rep5 1165.59790287629 1165.5968099358602 74.884 2 0.17516896267112309 0.0006801564359802754 0.9438714419765777 ['MED15|p.V609Cfs*38|1|0.2|ENSG00000099917|chr22:20584875-20584875|G/-|frameshift_variant', 'MED15|p.Q615Afs*53|1|0.11|ENSG00000099917|chr22:20584891-20584892|-/A|frameshift_variant', 'MED15|p.A683Gfs*30|1|0.14|ENSG00000099917|chr22:20585181-20585182|-/G|frameshift_variant', 'ENSG00000099917|ENST00000263205|MED15', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15'] 6597 18409 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 76.14 2 0.17516862925095966 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 135465 8103 YEAQDPEIA True H1975_Epitope_Rep3 1034.4556553166997 1034.45507496793 36.143 1 0.17515727889317356 0.0006801564359802754 0.9438714419765777 ['ENSG00000111678|ENST00000229281|C12orf57'] 93686 10860 RTLAEIAKV True PC9_epitope_Rep1 999.6076797143498 999.60658993586 46.659 2 0.1751445772363566 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 9844 19173 AYLPEWKENI True PC9_epitope_Rep2 1261.6342883850098 1261.6331899358602 79.121 2 0.17514168931668553 0.0006801564359802754 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 18059 18898 EIITIIHQV True PC9_epitope_Rep1 1064.6229954253201 1064.62188993586 77.476 2 0.17514142804736246 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 70351 22504 LYPSIIQEF True PC9_epitope_Rep1 1108.580461907 1108.57987496793 91.363 1 0.17513937533034746 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 67235 11961 LTDLVDDNY True H1975_Epitope_Rep3 1066.48187006454 1066.48076993586 51.166 2 0.17512198245028304 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 108612 5347 TEINSQRIAA True H1975_Epitope_Rep2 1101.5778361380499 1101.5767299358602 25.614 2 0.17511115293107493 0.0006801564359802754 0.9438714419765777 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 7452 12889 ASDLSQPDLVY True H1975_Epitope_Rep2 1206.57683307854 1206.5757299358602 54.69 2 0.1751090287173479 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 114137 6326 TRSITNTTV True PC9_epitope_Rep5 991.52982331647 991.52872993586 29.308 2 0.17509778981165106 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 109629 15071 THDITTISI True PC9_epitope_Rep2 999.52367530687 999.52256993586 63.229 2 0.1750857810122781 0.0006801564359802754 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 129379 10805 VTEEPQRLFY True H1975_Epitope_Rep2 1280.64010204144 1280.63900993586 46.59 2 0.17508326876522767 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104081|Q96LC9-3|BMF', 'nc|ENSG00000104081|Q96LC9-2|BMF', 'ENSG00000104081|ENST00000354670|BMF'] 40251 13496 HRIQDLEQL True PC9_epitope_Rep5 1150.6094706195 1150.60783490379 56.932 3 0.17508198948686998 0.0006801564359802754 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 2692 8293 AETEFFSKA True H1975_Epitope_Rep2 1028.48147614172 1028.4803699358602 36.85 2 0.17507977895933327 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 105710 12368 SVHKGFAFV True PC9_epitope_Rep1 990.5287011176598 990.52760993586 52.432 2 0.17507777310061937 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 105864 17558 SVKNGFLTI True PC9_epitope_Rep1 977.55458151233 977.55348993586 72.329 2 0.17507456996173795 0.0006801564359802754 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 8138 14805 ATEYEIELY True H1975_Epitope_Rep2 1129.5179212200899 1129.5168299358602 62.105 2 0.17507249335025524 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC'] 22233 13286 ETDLLDIRSEY True H1975_Epitope_Rep3 1352.64597526752 1352.6454749679299 56.362 1 0.17507177985975875 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 76114 4637 NRPGTVSSL True PC9_epitope_Rep6 929.49304388493 929.49194993586 25.149 2 0.17506937472949233 0.0006801564359802754 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 135548 6360 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52897496793 29.525 1 0.1750683117871881 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 102451 10369 SPYDM[Oxidation]LESIR True H1975_Epitope_Rep1 1225.56488887629 1225.56378993586 44.833 2 0.17506773295711958 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 18698 9407 ELDEHELDY True H1975_Epitope_Rep3 1161.4825983405299 1161.48150993586 41.184 2 0.17506772197149933 0.0006801564359802754 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18'] 132862 13132 VYTSGIYNI True NCI_RA007_Epitope_Rep5 1028.51786165044 1028.51676993586 57.188 2 0.17506405112932388 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1'] 109123 19617 TFITSGMRF True PC9_epitope_Rep1 1058.5219014850597 1058.5208099358601 80.284 2 0.17505513159107275 0.0006801564359802754 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 25286 8747 FEDVVNQSSPK True PC9_epitope_Rep5 1248.59863115228 1248.5975299358602 38.587 2 0.1750532347570736 0.0006801564359802754 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 94997 15415 RYQDIIHSI True PC9_epitope_Rep3 1143.6036569630699 1143.60254993586 64.448 2 0.17504538807721037 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 15313 19253 EAITHLLGV True PC9_epitope_Rep2 951.5389314481898 951.53782993586 79.43 2 0.17503921078852047 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 319 19398 AAIEIFEKV True PC9_epitope_Rep5 1018.5698972232999 1018.56880993586 79.66 2 0.17503166590697816 0.0006801564359802754 0.9438714419765777 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 24130 5511 EYSKQMQRF True PC9_epitope_Rep4 1215.57064258263 1215.56899490379 27.958 3 0.1750312304709787 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 136545 14652 YHSEVPVSL True PC9_epitope_Rep1 1029.51311062317 1029.51257496793 61.181 1 0.17502957482364687 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 26031 21281 FHDHALMIIF True PC9_epitope_Rep1 1242.6219498795 1242.6208499358602 86.683 2 0.1750273267390689 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 29376 13691 FVEPSRQFV True PC9_epitope_Rep2 1107.5712942056298 1107.57018993586 57.953 2 0.17502412953167357 0.0006801564359802754 0.9438714419765777 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 84878 8926 QHQSGIVQL True PC9_epitope_Rep6 1008.5352430500798 1008.53414993586 44.309 2 0.17502057550289007 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 110521 4424 TIQSGEQPYK True NCI_RA007_Epitope_Rep2 1149.56660274801 1149.56550993586 21.841 2 0.1750183383863223 0.0006801564359802754 0.9438714419765777 ['ENSG00000168653|ENST00000372969|NDUFS5'] 139943 20117 YVIDPIKGLKL True PC9_epitope_Rep3 1257.7696596590097 1257.7680149037901 82.631 3 0.17501509269644847 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 67559 7917 LTEQYNEQY True H1975_Epitope_Rep1 1186.51423282198 1186.5131299358602 35.404 2 0.17499859884264282 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 37236 17876 GVVEKLSVL True PC9_epitope_Rep1 942.5749826037398 942.57388993586 73.553 2 0.17499569238587598 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000503693.1_1_4:1283701-1322488:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-5|MAEA'] 112198 16657 TLVYHVVGV True PC9_epitope_Rep1 985.5596668927699 985.55856993586 68.9 2 0.17499459628173902 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 28080 9509 FRDQNPEQL True PC9_epitope_Rep5 1145.5465360097699 1145.54542993586 41.535 2 0.1749943421616203 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 109499 17415 THAAEDIVYTL True PC9_epitope_Rep2 1231.6084675599898 1231.60736993586 72.245 2 0.17499309911135486 0.0006801564359802754 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 109877 14854 THMTAIVGM True PC9_epitope_Rep3 959.4568587003499 959.45576993586 62.272 2 0.17499218875157563 0.0006801564359802754 0.9438714419765777 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 71122 19034 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 79.014 2 0.17499006636890915 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 113853 14530 TREGGSIPVTL True PC9_epitope_Rep3 1128.6138872935999 1128.61278993586 61.011 2 0.17498883923529282 0.0006801564359802754 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 45223 13832 IRKPYIWEY True PC9_epitope_Rep6 1266.67609362734 1266.6749899358601 65.013 2 0.17498843315957302 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 67230 11914 LTDLVDDNY True H1975_Epitope_Rep2 1066.48187006454 1066.48076993586 50.907 2 0.17498338719824139 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 23947 12354 EYNSDLHQF True PC9_epitope_Rep3 1151.4883524273098 1151.48724993586 52.547 2 0.17498194016191296 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 137097 10269 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.5333749679298 44.444 1 0.1749814166739629 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 87086 12574 QSELVGQLY True H1975_Epitope_Rep1 1035.52367530687 1035.52317496793 53.413 1 0.17497497175908383 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 138735 7306 YSADREDLY True H1975_Epitope_Rep3 1130.48801807414 1130.4869299358602 33.075 2 0.17497289740763441 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 102745 4763 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 23.187 2 0.1749681933432268 0.0006801564359802754 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 96077 7969 SEDEWTSQA True H1975_Epitope_Rep3 1051.40943340027 1051.4083299358601 35.624 2 0.17496560943871725 0.0006801564359802754 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 132095 21811 VYILQPEVI True PC9_epitope_Rep1 1072.6168474157198 1072.61574993586 88.707 2 0.17496327475145684 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 40650 20448 HTILDLPAV True PC9_epitope_Rep1 977.55458151233 977.55348993586 83.463 2 0.17496311320961475 0.0006801564359802754 0.9438714419765777 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 9900 21921 AYPEYLITF True PC9_epitope_Rep4 1115.55391280599 1115.55280993586 92.528 2 0.17496117680978648 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 139689 9896 YTTDRVMTV True PC9_epitope_Rep4 1084.5222954078802 1084.52118993586 45.716 2 0.17495892604223293 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 45151 12859 IRDEYVETL True PC9_epitope_Rep4 1136.5713537752802 1136.5702499358601 57.33 2 0.17495624212939975 0.0006801564359802754 0.9438714419765777 ['ENSG00000223501|ENST00000445902|VPS52', 'nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENST00000495755.1_1_6:33235423-33235928:-|nuORF'] 23795 14234 EYLDDRNTF True PC9_epitope_Rep3 1171.51456717515 1171.51346993586 59.837 2 0.17495374705199904 0.0006801564359802754 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.H214R|4|0.56|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant', 'TP53|p.R213G|1|0.52|ENSG00000141510|chr17:7674894-7674894|G/C|missense_variant', 'TP53|p.R213L|1|0.15|ENSG00000141510|chr17:7674893-7674893|C/A|missense_variant'] 109217 18522 TFTFSHATF True PC9_epitope_Rep5 1057.4868958753298 1057.48578993586 76.269 2 0.17494704303739902 0.0006801564359802754 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 24178 11885 EYTPRSWNF True NCI_RA007_Epitope_Rep5 1198.54072235334 1198.5396299358601 52.37 2 0.17494471099801684 0.0006801564359802754 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 43751 19031 IIVKDFETI True PC9_epitope_Rep5 1076.61176203528 1076.6106699358602 78.23 2 0.17494403703451009 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF', 'nc|ENSG00000138119|Q9NZM1-4|MYOF', 'MYOF|p.P166Afs*30|1|0.08|ENSG00000138119|chr10:93409677-93409678|-/C|frameshift_variant'] 138926 11332 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep2 1177.4849072200898 1177.4843749679299 48.637 1 0.17494333249188565 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 72251 20161 MRYVASYLLA True PC9_epitope_Rep1 1185.6216155263298 1185.6205099358601 82.378 2 0.17493852569662754 0.0006801564359802754 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 128416 10476 VSEDSSVTQIY True H1975_Epitope_Rep3 1226.56666231766 1226.5655699358601 45.358 2 0.17493447574006543 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 119532 10172 VEQWPYRAVA True H1975_Epitope_Rep1 1217.61930702721 1217.61820993586 44.066 2 0.17492812491182225 0.0006801564359802754 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 138530 14808 YRLLPGPSA True PC9_epitope_Rep5 972.5392658013599 972.53816993586 61.958 2 0.1749227369019525 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 140089 13544 YVPETVYRV True PC9_epitope_Rep2 1124.5866099165999 1124.58550993586 57.39 2 0.17492222399153612 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 9590 19227 AYDTVRWEF True PC9_epitope_Rep4 1185.5454733806098 1185.54436993586 82.057 2 0.17491037638595872 0.0006801564359802754 0.9438714419765777 ['ENST00000482088.5_1_9:140007335-140007673:-|nuORF', 'ENST00000460830.1_1_9:140006993-140007673:-|nuORF', 'ENST00000473532.5_1_9:140005202-140008344:-|nuORF', 'ENSG00000176978|ENST00000371579|DPP7'] 31159 16986 GDEELDSLIK True PC9_epitope_Rep1 1117.5502839775297 1117.54918993586 70.159 2 0.17490370402582148 0.0006801564359802754 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 94829 13087 RYLTVATVF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 57.017 2 0.17490128739018387 0.0006801564359802754 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 68798 18970 LVDQNIFSFY True H1975_Epitope_Rep1 1244.607739284 1244.60664993586 79.095 2 0.1748916472983907 0.0006801564359802754 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 104759 13041 STDLQDYTYY True H1975_Epitope_Rep3 1267.52446315251 1267.52387496793 55.401 1 0.17488787421335836 0.0006801564359802754 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 52032 19636 KLGDFGLATV True PC9_epitope_Rep3 1019.5651461960299 1019.56404993586 80.767 2 0.1748849857369612 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 103319 16404 SQVDRLVAL True PC9_epitope_Rep3 999.5712942056298 999.57018993586 68.236 2 0.17487887540615019 0.0006801564359802754 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 38717 9895 HHSNLIAGM True PC9_epitope_Rep5 978.47053461854 978.46942993586 43.031 2 0.17486996062683838 0.0006801564359802754 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 72082 15851 M[Oxidation]RDPIRILV True PC9_epitope_Rep3 1127.64849936095 1127.64685490379 66.121 3 0.1748689998896164 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 43703 12768 IIQLLDDYPK True H1975_Epitope_Rep1 1216.67033954056 1216.66924993586 54.173 2 0.174865836309034 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000448115.1_1_1:220490746-220490923:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 35773 5151 GTVIHFNNPK True NCI_RA007_Epitope_Rep3 1125.59309227937 1125.59143490379 27.253 3 0.17486336173560227 0.0006801564359802754 0.9438714419765777 ['RGNEF-BTF3|1|fusion', 'nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 104291 14552 SSEELPLYY True H1975_Epitope_Rep3 1099.5073565363898 1099.50624993586 61.341 2 0.17486202662702205 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 17521 11173 EHINEGETAML True PC9_epitope_Rep4 1242.55505208814 1242.5539499358601 50.755 2 0.17485216600469022 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 21423 14472 ERNPTQFQL True PC9_epitope_Rep1 1131.5672714543498 1131.5661699358602 60.491 2 0.1748488507890989 0.0006801564359802754 0.9438714419765777 ['ENST00000582655.5_1_17:27237828-27251299:-|nuORF', 'nc|ENSG00000109118|Q96QT6-2|PHF12', 'ENST00000582436.5_1_17:27237055-27251401:-|nuORF', 'nc|ENSG00000109118|Q96QT6-5|PHF12', 'nc|ENSG00000109118|Q96QT6-3|PHF12', 'ENSG00000109118|ENST00000332830|PHF12'] 6591 18732 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 76.841 2 0.1748365263633795 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 7862 3936 ATALPTGTSK True NCI_RA007_Epitope_Rep4 945.5131106231701 945.51200993586 21.376 2 0.1748330831967069 0.0006801564359802754 0.9438714419765777 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1'] 114404 8677 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41782993586 38.337 2 0.17482595363256376 0.0006801564359802754 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 39883 21652 HQILTPFLL True PC9_epitope_Rep5 1080.6331661862 1080.63206993586 88.329 2 0.17482492415840395 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 8128 9589 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51166993586 41.859 2 0.17482443912153292 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 41654 13286 IDIIPNPQER True PC9_epitope_Rep6 1193.64043639461 1193.6393299358601 62.757 2 0.17482288582471944 0.0006801564359802754 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 5499 19819 AMSSKFFLV True PC9_epitope_Rep2 1028.5364889200398 1028.5353899358602 81.623 2 0.17481988709477492 0.0006801564359802754 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 89348 8598 REMEENFAV True NCI_RA007_Epitope_Rep3 1123.49680893603 1123.49570993586 40.895 2 0.17481771933402618 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 3938 13318 AHDTTLVAL True PC9_epitope_Rep2 939.50254593947 939.50144993586 56.502 2 0.17481494844209514 0.0006801564359802754 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 112309 6076 TM[Oxidation]DNPTTTQY True H1975_Epitope_Rep3 1186.48121882198 1186.48012993586 28.384 2 0.17481248878100245 0.0006801564359802754 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 89481 6659 REQLPPTTV True H1975_Epitope_Rep3 1039.5662088251897 1039.5651099358602 30.566 2 0.17480952151516732 0.0006801564359802754 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 72381 9627 MTEEEQIAY True H1975_Epitope_Rep3 1112.4695911286797 1112.4684899358601 42.046 2 0.1748091443698588 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 63674 7025 LPPNVVEESAR True H1975_Epitope_Rep1 1209.63535101417 1209.63424993586 32.057 2 0.17480114046131037 0.0006801564359802754 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000024146', 'ENST00000462568.1_1_12:9232657-9243123:-|nuORF', 'ENSG00000175899|ENST00000318602|A2M'] 105845 20460 SVITQVFHV True PC9_epitope_Rep1 1028.5654805492 1028.5643899358602 83.511 2 0.1748005071689736 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 28910 12467 FTEEQAVLY True H1975_Epitope_Rep2 1098.5233409536997 1098.5222499358601 53.043 2 0.17479862938301943 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 47196 17999 IYAPKLQEF True PC9_epitope_Rep1 1107.59644632431 1107.5953499358602 74.027 2 0.17479822928659325 0.0006801564359802754 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 139967 19558 YVISEGFLKA True PC9_epitope_Rep1 1125.60701100801 1125.6059099358602 80.054 2 0.1747867128861803 0.0006801564359802754 0.9438714419765777 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 65026 12532 LSDISVVSNY True H1975_Epitope_Rep3 1095.54480467427 1095.54427496793 53.401 1 0.17478653736846828 0.0006801564359802754 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.S393F|1|0.37|ENSG00000137965|chr1:78662768-78662768|C/T|missense_variant', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 43491 19016 IHYYEQITL True PC9_epitope_Rep5 1178.5971746002997 1178.5960699358602 78.171 2 0.17478646938805448 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110080|Q11206-7|ST3GAL4', 'nc|ENSG00000110080|Q11206-3|ST3GAL4', 'nc|ENSG00000110080|Q11206-6|ST3GAL4', 'nc|ENSG00000110080|Q11206-5|ST3GAL4', 'nc|ENSG00000110080|Q11206-2|ST3GAL4', 'ENSG00000110080|ENST00000444328|ST3GAL4', 'nc|ENSG00000110080|Q11206-4|ST3GAL4'] 71318 20674 MHFLENISL True PC9_epitope_Rep2 1102.5481162329 1102.5470099358602 84.959 2 0.17477464452418862 0.0006801564359802754 0.9438714419765777 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 40387 15811 HRTEMDWVL True PC9_epitope_Rep4 1185.5600778989299 1185.5589899358602 68.741 2 0.17477356388856485 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 47878 7159 IYTSSVNRL True NCI_RA007_Epitope_Rep5 1051.56620882519 1051.5651099358602 34.212 2 0.1747649764742402 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 97478 19855 SGLLKVWQV True PC9_epitope_Rep2 1028.6018660579198 1028.6007699358602 81.764 2 0.17476362482349672 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 131705 18060 VWSDVTPLTF True NCI_RA007_Epitope_Rep4 1163.58627556343 1163.5851699358602 78.154 2 0.1747601654664032 0.0006801564359802754 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 28892 8905 FTDVRAAVY True H1975_Epitope_Rep3 1040.52909504048 1040.5279899358602 39.252 2 0.17474987111067247 0.0006801564359802754 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'nc|ENSG00000115414|P02751-16|FN1', 'nc|ENSG00000115414|P02751-2|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 59822 17940 LHDISSLL True PC9_epitope_Rep4 896.49673228304 896.49562993586 77.057 2 0.17474986167227746 0.0006801564359802754 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 67201 9090 LTDITKGVQY True H1975_Epitope_Rep1 1136.607739284 1136.60717496793 39.868 1 0.17474568133724283 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 49324 10826 KIAPNTPQL True PC9_epitope_Rep5 980.5654805492 980.56438993586 46.63 2 0.1747406795501682 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 7078 17251 AQWHEQILV True PC9_epitope_Rep3 1122.5821932425 1122.58108993586 71.508 2 0.17472873353243507 0.0006801564359802754 0.9438714419765777 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF', 'ARRDC1|p.R234Q|1|0.08|ENSG00000197070|chr9:137614381-137614381|G/A|missense_variant'] 125746 9870 VNFTVDQIR True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 44.611 2 0.17472753676437686 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000594885.1_1_19:3984132-3985378:-|nuORF'] 31642 8837 GEHGLIIRV True NCI_RA007_Epitope_Rep2 992.57671393924 992.57560993586 39.023 2 0.17472314370063877 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 25194 8877 FEADPPGQV True H1975_Epitope_Rep2 958.4396113297399 958.43850993586 39.115 2 0.1747167315676429 0.0006801564359802754 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 46200 5922 ITDKNSLAY True H1975_Epitope_Rep2 1023.52367530687 1023.5225699358599 27.765 2 0.17471553276221063 0.0006801564359802754 0.9438714419765777 ['ENSG00000163510|ENST00000410053|CWC22'] 5586 8774 ANTFVAELK True H1975_Epitope_Rep3 991.5338460677499 991.53274993586 38.756 2 0.1747138222406639 0.0006801564359802754 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 17293 16229 EHDGSLFQAV True PC9_epitope_Rep5 1101.50908787189 1101.50798993586 67.414 2 0.17471265896552032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 96168 13378 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.40686993586 56.568 2 0.1747013906048442 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 129905 6908 VTLTSEEEAR True PC9_epitope_Rep1 1133.5564319871298 1133.55532993586 31.377 2 0.17470107471060412 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 19956 13094 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47904993586 55.491 2 0.17469478573599148 0.0006801564359802754 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 132572 18518 VYPNSFFRY True PC9_epitope_Rep4 1191.5712942056298 1191.57018993586 79.302 2 0.17469164062358478 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 73764 16119 NHASLISAL True PC9_epitope_Rep3 924.50288029264 924.50178993586 67.152 2 0.1746914897688052 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 108491 4538 TEEYPNKPP True H1975_Epitope_Rep3 1073.5029398622898 1073.50184993586 22.575 2 0.1746831587036335 0.0006801564359802754 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A'] 102675 4644 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 22.958 2 0.1746797079023096 0.0006801564359802754 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 43439 12035 IHSQPQPALL True PC9_epitope_Rep5 1102.61349337078 1102.6123899358602 51.287 2 0.17467720226367892 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 133226 8170 WEDFKQNTP True H1975_Epitope_Rep3 1163.5247379360299 1163.52364993586 36.405 2 0.1746732778357719 0.0006801564359802754 0.9438714419765777 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 89213 6034 REILVNQTA True NCI_RA007_Epitope_Rep4 1042.5771078620598 1042.5760099358602 29.827 2 0.17466935150138704 0.0006801564359802754 0.9438714419765777 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D', 'ENST00000502526.1_1_4:119659352-119659508:-|nuORF'] 132246 16847 VYKTIMEQF True PC9_epitope_Rep4 1157.57908200801 1157.5779899358602 72.784 2 0.17466798642413206 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 27716 21014 FQDPVPLTV True PC9_epitope_Rep3 1014.5385970950199 1014.53750993586 86.108 2 0.17466615675364036 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 79082 14852 PFVDHVFTF True NCI_RA007_Epitope_Rep3 1107.53893144819 1107.5378299358601 65.85 2 0.17466540823340454 0.0006801564359802754 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 94953 12888 RYPSNLQLF True NCI_RA007_Epitope_Rep5 1136.59784330664 1136.59674993586 56.256 2 0.17466400212896482 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 67240 16448 LTDLVDDNYF True H1975_Epitope_Rep2 1213.5502839775302 1213.54918993586 68.486 2 0.17466262435707294 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 135217 9345 YAYDGKDYL True NCI_RA007_Epitope_Rep3 1106.4920408254197 1106.49147496793 43.852 1 0.1746580772501623 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 91152 18953 RLPETLPSL True PC9_epitope_Rep3 1024.59169529704 1024.5905899358602 78.126 2 0.1746480671574644 0.0006801564359802754 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 9886 23727 AYNDNWFITF True PC9_epitope_Rep5 1289.57168812845 1289.5705899358602 96.246 2 0.17464383355937163 0.0006801564359802754 0.9438714419765777 ['ENSG00000107929|ENST00000316157|LARP4B', 'LARP4B|p.S572Lfs*24|1|0.11|ENSG00000107929|chr10:815015-815052|GGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCT/-|frameshift_variant'] 138078 10827 YQEELSREL True PC9_epitope_Rep6 1165.5615173675699 1165.5604299358602 52.498 2 0.17464166674085183 0.0006801564359802754 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 53234 8554 KTEIM[Oxidation]SPLY True H1975_Epitope_Rep2 1096.5474479069999 1096.54634993586 37.858 2 0.17463963267053678 0.0006801564359802754 0.9438714419765777 ['ENSG00000108592|ENST00000427159|FTSJ3', 'ENST00000583202.5_1_17:61898213-61899202:-|nuORF'] 120252 11035 VFPDKGYSF True NCI_RA007_Epitope_Rep4 1058.5072969667401 1058.5061899358602 49.318 2 0.17462559665208383 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 40304 11100 HRQTEVFTL True PC9_epitope_Rep2 1129.58800689893 1129.5869099358601 48.02 2 0.17462429506151564 0.0006801564359802754 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 128677 7777 VSMDYAISK True NCI_RA007_Epitope_Rep4 1012.4899326504399 1012.4888299358599 36.596 2 0.17462294799212932 0.0006801564359802754 0.9438714419765777 ['ENSG00000196453|ENST00000247930|ZNF777'] 75589 19810 NQQLPIESQMV True PC9_epitope_Rep1 1285.63363676201 1285.63252993586 81.015 2 0.17461727999348123 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 103665 15295 SRDPNYLNL True PC9_epitope_Rep3 1090.54072235334 1090.5396299358601 63.985 2 0.17461634772584733 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 90486 4496 RKAALEQDL True NCI_RA007_Epitope_Rep3 1042.5771078620598 1042.5760099358602 24.522 2 0.1746158783005908 0.0006801564359802754 0.9438714419765777 ['ENSG00000100292|ENST00000216117|HMOX1'] 46236 9136 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.54912993586 40.093 2 0.17460351017036158 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 135100 13252 YALYDATYETK True PC9_epitope_Rep4 1336.61869789052 1336.6176099358602 58.872 2 0.1745918053753987 0.0006801564359802754 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 139824 5852 YVDGVEVHN True NCI_RA007_Epitope_Rep2 1030.47197408718 1030.47086993586 27.381 2 0.1745786324470744 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 25907 20251 FGLARAFGV True PC9_epitope_Rep3 936.5181364339599 936.51702993586 83.157 2 0.17457678484887973 0.0006801564359802754 0.9438714419765777 ['ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'ENST00000554619.5_1_12:56361683-56363594:+|nuORF', 'ENST00000556656.5_1_12:56361683-56365109:+|nuORF', 'nc|ENSG00000123374|P24941-2|CDK2'] 102565 17847 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51234993586 73.443 2 0.1745737013780811 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 89744 5448 REYQLNDSAA True NCI_RA007_Epitope_Rep5 1165.53636524889 1165.53526993586 27.642 2 0.1745734378032863 0.0006801564359802754 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 76806 10865 NVELDPEIQ True NCI_RA007_Epitope_Rep4 1055.51350454599 1055.51297496793 48.642 1 0.17457282632063081 0.0006801564359802754 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 76578 6756 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.46030993586 30.939 2 0.17456184446513714 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 10022 18974 AYTPFHAVL True PC9_epitope_Rep3 1017.5283667644899 1017.52726993586 78.206 2 0.17456121822487752 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 104785 12562 STDPLDAGVDY True H1975_Epitope_Rep3 1151.4982484046698 1151.49767496793 53.519 1 0.17456056879242243 0.0006801564359802754 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 132245 16761 VYKTIMEQF True PC9_epitope_Rep4 1157.57908200801 1157.5779899358602 72.438 2 0.1745601162511038 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 11170 20724 DEHLQLISL True PC9_epitope_Rep2 1066.56587447202 1066.56476993586 85.152 2 0.17455997152153827 0.0006801564359802754 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 123345 15732 VHYGEVVQL True PC9_epitope_Rep1 1042.54474510462 1042.54364993586 65.336 2 0.1745570343617658 0.0006801564359802754 0.9438714419765777 ['ENSG00000127080|ENST00000287996|IPPK'] 69925 18964 LYDPVISKL True PC9_epitope_Rep1 1046.6011973515801 1046.60010993586 77.728 2 0.17455619060787364 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 14328 17305 DTDIVDEAIYY True H1975_Epitope_Rep2 1315.58197802863 1315.5808899358601 71.857 2 0.1745383320510073 0.0006801564359802754 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 106102 7889 SVNELIYK True NCI_RA007_Epitope_Rep5 964.5229470308799 964.52184993586 37.038 2 0.17453133094790962 0.0006801564359802754 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461513.1_1_17:49579856-49580498:-|nuORF', 'ENST00000444633.1_1_10:100807788-100807923:+|nuORF'] 103047 7427 SQLDEVRQA True PC9_epitope_Rep1 1044.51998690876 1044.5188899358602 33.383 2 0.174527258762861 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'ENST00000514708.5_1_4:1309356-1332271:+|nuORF', 'ENST00000515766.1_1_4:1326530-1330951:+|nuORF', 'ENST00000506530.5_1_4:1326530-1332660:+|nuORF'] 54253 19688 KYPENFFLL True PC9_epitope_Rep6 1169.61209638845 1169.61098993586 88.388 2 0.1745242197440523 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 38610 18426 HHIPDVITYL True PC9_epitope_Rep4 1206.63970811862 1206.6386099358601 78.944 2 0.17451539857190815 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 5232 10985 ALQEMVHQV True PC9_epitope_Rep4 1053.52771514149 1053.52660993586 50.029 2 0.1745152016566811 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 76633 9020 NTIDPSHPM True PC9_epitope_Rep3 1010.4491304676201 1010.44802993586 39.639 2 0.17451149419972972 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 140702 20512 YYQEYPMSI True PC9_epitope_Rep1 1192.5110620178398 1192.50996993586 83.71 2 0.1745111810186228 0.0006801564359802754 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 140473 20491 YYIDKLEYL True PC9_epitope_Rep5 1218.6172413385398 1218.6161499358602 83.858 2 0.174511060157578 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000484741.1_1_10:5496419-5498268:+|nuORF'] 41638 9076 IDIDPEETVK True H1975_Epitope_Rep3 1157.58158410581 1157.5804899358602 39.896 2 0.17451078358893435 0.0006801564359802754 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B'] 88337 19565 QYLQDAYSF True PC9_epitope_Rep4 1133.5029398622898 1133.50184993586 83.379 2 0.1745084443533596 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 74019 7255 NHSADFETV True PC9_epitope_Rep4 1018.43558857846 1018.43448993586 35.216 2 0.17450607786286512 0.0006801564359802754 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 34603 9385 GQHPNIITL True NCI_RA007_Epitope_Rep3 991.5450794577899 991.5439899358599 44.005 2 0.17450035031374217 0.0006801564359802754 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'RPS6KA6|p.R473P|1|0.56|ENSG00000072133|chrX:84105824-84105824|C/G|missense_variant', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 53871 19720 KYIDFDHVF True PC9_epitope_Rep3 1182.57095985246 1182.5693249037902 81.081 3 0.17449689553552775 0.0006801564359802754 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 75686 16673 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53856993586 69.136 2 0.17449588116280862 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 139818 6608 YVDEEGNLVK True H1975_Epitope_Rep3 1164.5662683948397 1164.56516993586 30.37 2 0.17449365433155453 0.0006801564359802754 0.9438714419765777 ['ENST00000474787.1_1_9:139974466-139974655:+|nuORF', 'nc|ENSG00000197355|Q3KQV9-2|UAP1L1', 'ENSG00000197355|ENST00000409858|UAP1L1'] 132338 9641 VYLPTHTSL True NCI_RA007_Epitope_Rep5 1029.54949613189 1029.54838993586 43.723 2 0.1744929428065717 0.0006801564359802754 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 108340 4242 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 21.428 2 0.17449165848124046 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 71369 8513 MIDETRNSLY True H1975_Epitope_Rep1 1240.5757875327201 1240.57468993586 37.675 2 0.1744834711673797 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 37376 9074 GVYGDVQRV True PC9_epitope_Rep2 991.5086939490699 991.50758993586 40.247 2 0.1744770644463379 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'PTBP2|p.A484Rfs*2|2|0.3|ENSG00000117569|chr1:96813062-96813063|-/T|frameshift_variant', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 83856 6561 QEGPVGPAP True H1975_Epitope_Rep3 850.4184819623398 850.41793496793 30.196 1 0.17447189175196082 0.0006801564359802754 0.9438714419765777 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENST00000550016.5_1_12:113600735-113603481:-|nuORF'] 18694 9427 ELDDTLKY True H1975_Epitope_Rep2 995.4811417885501 995.48004993586 41.228 2 0.17446341361004414 0.0006801564359802754 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000472253.1_1_5:133533465-133534901:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 54211 16446 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 71.292 2 0.1744601349783819 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 9123 13172 AVLPQTRYV True PC9_epitope_Rep5 1045.59202965021 1045.59092993586 55.67 2 0.17445834104987484 0.0006801564359802754 0.9438714419765777 ['ADAM9-HTRA4|1|fusion', 'nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 94745 19696 RYLNEFEEL True PC9_epitope_Rep1 1211.5822528121498 1211.5811499358601 80.586 2 0.17445739983972056 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 96355 10975 SEFTKIITP True NCI_RA007_Epitope_Rep4 1034.5648118428599 1034.56370993586 49.084 2 0.1744532391711135 0.0006801564359802754 0.9438714419765777 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 7199 14733 ARDETEFYL True PC9_epitope_Rep6 1142.5244035828598 1142.5233099358602 68.62 2 0.17445197495508144 0.0006801564359802754 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 101656 21256 SPFQFTVGP True PC9_epitope_Rep1 978.4810822188999 978.48053496793 86.584 1 0.17444741605376288 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 139807 20231 YVDDQLFVFY True H1975_Epitope_Rep1 1307.60740493083 1307.60630993586 84.166 2 0.17444143730744566 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000010704|Q30201-10|HFE', 'nc|ENSG00000010704|Q30201-7|HFE', 'nc|ENSG00000010704|Q30201-8|HFE', 'nc|ENSG00000010704|Q30201-5|HFE', 'nc|ENSG00000010704|Q30201-3|HFE', 'ENSG00000010704|ENST00000357618|HFE', 'nc|ENSG00000010704|Q30201-9|HFE', 'ENST00000486147.1_1_6:26087668-26093021:+|nuORF', 'ENST00000483782.1_1_6:26087668-26091517:+|nuORF'] 104336 5855 SSESGHYYSY True H1975_Epitope_Rep3 1178.4516325654201 1178.45052993586 27.535 2 0.17444106009983504 0.0006801564359802754 0.9438714419765777 ['ENSG00000170185|ENST00000307017|USP38', 'nc|ENSG00000170185|Q8NB14-2|USP38'] 43613 19193 IIIPEIQKV True PC9_epitope_Rep3 1051.66413196131 1051.66302993586 79.043 2 0.17444029068301234 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 74149 15957 NHYNNIMAL True PC9_epitope_Rep1 1088.50731405008 1088.5062099358602 66.188 2 0.1744398870869101 0.0006801564359802754 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 135215 9294 YAYDGKDYL True NCI_RA007_Epitope_Rep3 1106.4920408254197 1106.49094993586 43.663 2 0.17443716212102978 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 70774 7610 MEEEPTHLP True H1975_Epitope_Rep2 1081.4750108622898 1081.47390993586 34.224 2 0.17442305745323353 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 17019 13321 EGLPVALDK True PC9_epitope_Rep3 940.5229470308799 940.52184993586 56.273 2 0.17441898096449726 0.0006801564359802754 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000427559.1_1_2:112698001-112698598:-|nuORF'] 106040 14418 SVLQQNPSL True PC9_epitope_Rep2 984.52400966004 984.52290993586 60.727 2 0.17441391581988827 0.0006801564359802754 0.9438714419765777 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 76515 11092 NTDLGNDLY True H1975_Epitope_Rep3 1023.4509042894299 1023.4503749679301 47.758 1 0.17440801774668377 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 52821 18414 KQVEEIFNL True PC9_epitope_Rep4 1118.5971746003 1118.5966749679299 78.897 1 0.1744067600074727 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 94846 7599 RYMPQNPHI True PC9_epitope_Rep2 1154.5654976325397 1154.5638449037901 34.599 3 0.17440385328431932 0.0006801564359802754 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 109820 20566 THLEGVLLL True PC9_epitope_Rep3 993.5858816406098 993.58478993586 84.373 2 0.1744033002469949 0.0006801564359802754 0.9438714419765777 ['ENSG00000204839|ENST00000398882|MROH6', 'MROH6|p.H353Lfs*180|1|0.11|ENSG00000204839|chr8:143570026-143570051|GAGGCCTCGCAGGTGGTGGTCGGCAT/-|frameshift_variant'] 78968 15366 PFHTSTEMF True PC9_epitope_Rep5 1095.46953155903 1095.46842993586 64.115 2 0.17440187314030497 0.0006801564359802754 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'CAMTA1-DHRS3|1|fusion'] 35232 6855 GSHSMRYFYT True NCI_RA007_Epitope_Rep3 1247.5393424543497 1247.5382499358602 34.075 2 0.17439812938582905 0.0006801564359802754 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 75685 16584 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53856993586 68.796 2 0.17439720441085885 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 116695 14716 TYITSVSRL True PC9_epitope_Rep5 1038.57095985246 1038.5698699358602 61.604 2 0.17439598939856568 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 104900 10732 STFNVFVGK True NCI_RA007_Epitope_Rep4 997.5232813840498 997.52218993586 48.127 2 0.17438849600280804 0.0006801564359802754 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'FKBP9|p.N129Ifs*10|1|0.39|ENSG00000122642|chr7:32975192-32975192|C/-|frameshift_variant', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 104458 4931 SSLNLRETN True NCI_RA007_Epitope_Rep5 1032.51998690876 1032.5188899358602 25.668 2 0.1743786030779565 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'VIM|p.D429Y|1|0.25|ENSG00000026025|chr10:17236305-17236305|G/T|missense_variant'] 12983 5635 DLPVSEQQER True H1975_Epitope_Rep3 1199.57823006087 1199.57712993586 26.712 2 0.17437857938120627 0.0006801564359802754 0.9438714419765777 ['ENSG00000185627|ENST00000532097|PSMD13', 'nc|ENSG00000185627|Q9UNM6-2|PSMD13'] 44467 8598 INPDLALEEK True H1975_Epitope_Rep1 1140.60265390356 1140.60154993586 38.002 2 0.1743774704273086 0.0006801564359802754 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1', 'ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 34498 7280 GQDVGRYQV True PC9_epitope_Rep2 1020.49885754136 1020.49776993586 33.39 2 0.17437657673304222 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 43593 13996 IIGTIFIIK True NCI_RA007_Epitope_Rep3 1016.6634036853198 1016.66230993586 62.362 2 0.17437517225526292 0.0006801564359802754 0.9438714419765777 ['ENSG00000204287|ENST00000395388|HLA-DRA'] 103538 16197 SRDDNMFQI True PC9_epitope_Rep4 1124.49205790876 1124.4909699358602 70.245 2 0.17437222143225645 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 108403 8885 TEEATFPQA True H1975_Epitope_Rep2 992.4450906329997 992.44398993586 39.146 2 0.17436642533520808 0.0006801564359802754 0.9438714419765777 ['CERS6-NOSTRIN|3|fusion', 'CERS6-NOSTRIN|1|fusion', 'CERS6-NOSTRIN|2|fusion', 'CERS6-G6PC2|1|fusion', 'ENSG00000172292|ENST00000305747|CERS6', 'nc|ENSG00000172292|Q6ZMG9-2|CERS6'] 14598 13313 DVIEEYFK True NCI_RA007_Epitope_Rep5 1041.50187723313 1041.5007899358602 57.889 2 0.17436637198661523 0.0006801564359802754 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12'] 114355 13143 TSDELQFGY True H1975_Epitope_Rep2 1058.4556553167 1058.45454993586 55.676 2 0.1743629664678677 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 32026 9216 GEVFKTYNV True H1975_Epitope_Rep2 1055.5287606873098 1055.52766993586 40.403 2 0.17435822981331767 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1'] 98941 4022 SIYRPSKNLDK True NCI_RA007_Epitope_Rep4 1319.7197493444698 1319.71810490379 21.727 3 0.17435772163549537 0.0006801564359802754 0.9438714419765777 ['ENSG00000100603|ENST00000261531|SNW1'] 108388 10318 TEDWDQPVA True H1975_Epitope_Rep3 1059.45090428943 1059.45037496793 44.74 1 0.17435348223244543 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 34505 6847 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 33.557 2 0.1743519912560617 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 123287 16225 VHSEQVFAL True PC9_epitope_Rep1 1028.5290950404797 1028.5279899358602 67.228 2 0.1743488021755359 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 45203 17230 IRKPYIWEY True PC9_epitope_Rep1 1266.67609362734 1266.6749899358601 71.093 2 0.17434513443215288 0.0006801564359802754 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 4368 17572 AIQDKLFQV True PC9_epitope_Rep4 1060.59169529704 1060.5905899358602 75.607 2 0.17434345316220473 0.0006801564359802754 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6'] 110013 12128 THTTPVLL True PC9_epitope_Rep1 880.5018176634799 880.50072993586 51.513 2 0.17434166131849207 0.0006801564359802754 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 70691 4540 [Acetylation]-M[Oxidation]DKNELVQK True NCI_RA007_Epitope_Rep2 1161.5699745730296 1161.5688699358602 22.288 2 0.17434092276327168 0.0006801564359802754 0.9438714419765777 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF'] 70993 7553 MEQLLSQGHQP True H1975_Epitope_Rep3 1266.6026709869 1266.6015699358602 34.034 2 0.17434071602005813 0.0006801564359802754 0.9438714419765777 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 6884 15196 AQIKEMVEL True PC9_epitope_Rep2 1059.56343194387 1059.5623299358601 63.711 2 0.17433832290570284 0.0006801564359802754 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 118810 7728 VEEENIRVV True H1975_Epitope_Rep3 1085.57168812845 1085.5705899358602 34.709 2 0.17433249047629393 0.0006801564359802754 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000475596.1_1_2:190306218-190316629:+|nuORF', 'ENST00000472286.5_1_2:190306218-190320233:+|nuORF'] 63937 14093 LPWQGLKAA True PC9_epitope_Rep6 982.5600012459398 982.55890993586 66.081 2 0.17432856269368158 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 27679 14269 FQDENHLYL True PC9_epitope_Rep6 1177.54038800017 1177.53928993586 66.777 2 0.17432546692247006 0.0006801564359802754 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 21168 9012 EREGLGQSL True PC9_epitope_Rep5 987.4985231881899 987.4974299358599 39.61 2 0.17432368859127625 0.0006801564359802754 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138771|ENST00000296043|SHROOM3', 'ENST00000486758.5_1_4:77631429-77663226:+|nuORF'] 89279 5911 RELEQRVSL True NCI_RA007_Epitope_Rep5 1128.62512068364 1128.6234749037899 29.422 3 0.1743157947690719 0.0006801564359802754 0.9438714419765777 ['TAOK1|p.G928Vfs*42|1|0.31|ENSG00000160551|chr17:29542799-29542801|GCC/TT|frameshift_variant', 'ENSG00000160551|ENST00000261716|TAOK1', 'TAOK1|p.R841Q|1|0.16|ENSG00000160551|chr17:29534278-29534278|G/A|missense_variant', 'nc|ENSG00000160551|Q7L7X3-3|TAOK1'] 7146 11192 AQYLINARL True NCI_RA007_Epitope_Rep4 1060.60292868708 1060.60182993586 49.936 2 0.17431543604007066 0.0006801564359802754 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 102806 17244 SQFNKEILL True PC9_epitope_Rep5 1090.60225998074 1090.60116993586 71.346 2 0.17431377398298115 0.0006801564359802754 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 103775 11494 SRFPQGAQL True PC9_epitope_Rep1 1002.5246783663797 1002.52358993586 49.091 2 0.17431318529712464 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 92266 17132 RQLDMELVSV True PC9_epitope_Rep6 1188.61725842188 1188.6161699358602 78.483 2 0.17431129589955785 0.0006801564359802754 0.9438714419765777 ['ENSG00000089902|ENST00000262241|RCOR1'] 5951 11258 APILVPHTA True PC9_epitope_Rep5 917.5334521449299 917.53234993586 48.294 2 0.17430758441668112 0.0006801564359802754 0.9438714419765777 ['ENSG00000223501|ENST00000445902|VPS52', 'nc|ENSG00000223501|Q8N1B4-2|VPS52'] 120419 22616 VFTEVANLF True PC9_epitope_Rep1 1038.53859709502 1038.53750993586 91.802 2 0.17430494815565445 0.0006801564359802754 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 73177 5392 NEEEIRANVA True H1975_Epitope_Rep1 1143.55201531303 1143.55090993586 25.797 2 0.17430186070019085 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 18277 7191 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep2 1176.6060254122801 1176.60547496793 32.592 1 0.17429834736221286 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 100165 20948 SLLENLEKI True PC9_epitope_Rep5 1057.60192562757 1057.60082993586 85.634 2 0.17429804112200886 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 35667 6220 GTMTGM[Oxidation]LYK True NCI_RA007_Epitope_Rep4 1016.46708941132 1016.46598993586 30.533 2 0.1742926480343167 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 132959 14980 VYTYIQSRF True PC9_epitope_Rep4 1175.5975089534697 1175.59640993586 65.559 2 0.1742918569449197 0.0006801564359802754 0.9438714419765777 ['DYRK4|p.R355Kfs*16|1|0.21|ENSG00000010219|chr12:4610195-4610196|-/A|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 48901 7398 KEVEQFTQV True H1975_Epitope_Rep2 1106.56078909158 1106.5596899358602 33.399 2 0.1742907912426729 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 29439 16761 FVHDLVLYL True NCI_RA007_Epitope_Rep1 1117.6171817688898 1117.6160899358601 69.321 2 0.1742807980758668 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 9884 23532 AYNDNWFITF True PC9_epitope_Rep2 1289.57168812845 1289.5705899358602 95.991 2 0.1742767910453437 0.0006801564359802754 0.9438714419765777 ['ENSG00000107929|ENST00000316157|LARP4B', 'LARP4B|p.S572Lfs*24|1|0.11|ENSG00000107929|chr10:815015-815052|GGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCT/-|frameshift_variant'] 123419 11662 VIDSAELQAY True H1975_Epitope_Rep3 1107.54480467427 1107.54370993586 49.993 2 0.17426280678342707 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 48384 3369 KEAPPMEKP True NCI_RA007_Epitope_Rep4 1025.52156713189 1025.52046993586 18.781 2 0.17426091807386765 0.0006801564359802754 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15'] 37777 4993 HAYDREVHL True H1975_Epitope_Rep3 1138.55195574338 1138.5503249037902 24.334 3 0.1742601843829338 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142330|Q9HC96-4|CAPN10', 'nc|ENSG00000142330|Q9HC96-2|CAPN10', 'ENSG00000142330|ENST00000391984|CAPN10', 'ENST00000483602.1_1_2:241534571-241535939:+|nuORF', 'ENST00000416591.5_1_2:241535566-241537362:+|nuORF'] 68836 18623 LVDTFLEDVK True PC9_epitope_Rep4 1177.6230549949698 1177.6219499358601 79.71 2 0.17426014649940363 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 13204 17982 DLTEYLSR True PC9_epitope_Rep5 995.49237517859 995.49126993586 74.186 2 0.1742564316911784 0.0006801564359802754 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 29478 20598 FVIDLQTRL True PC9_epitope_Rep5 1103.63389446219 1103.63278993586 84.276 2 0.17425415269486463 0.0006801564359802754 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'ITGB4-RBM39|1|fusion', 'ENST00000471635.5_1_20:34297104-34301010:-|nuORF'] 67719 12021 LTGHLEEVVL True NCI_RA007_Epitope_Rep1 1108.61282466444 1108.61172993586 50.746 2 0.17424570463418873 0.0006801564359802754 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 115470 16904 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep5 1178.5641606002998 1178.56306993586 70.035 2 0.17424149852160242 0.0006801564359802754 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 85651 14599 QLQGYLRSV True PC9_epitope_Rep1 1062.5821932425 1062.58108993586 60.978 2 0.17422976854544425 0.0006801564359802754 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000431036.1_1_22:45298215-45298323:+|nuORF'] 91589 12059 RPAQPTLWTA True PC9_epitope_Rep6 1139.60874234351 1139.60764993586 57.697 2 0.1742274072917379 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 56575 10141 LDVTSVEDYK True NCI_RA007_Epitope_Rep2 1167.5659340416698 1167.5648299358602 44.036 2 0.17422280422543104 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000432974.1_1_13:79483649-79483910:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 135533 6679 YEEEISKVA True H1975_Epitope_Rep2 1066.51825557326 1066.51714993586 30.6 2 0.1742219531929773 0.0006801564359802754 0.9438714419765777 ['ENSG00000163961|ENST00000318037|RNF168'] 139353 8866 YTDSYTDTY True H1975_Epitope_Rep2 1127.42950013851 1127.42897496793 39.072 1 0.17421696959313004 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 44885 21043 IQDEEFYTL True PC9_epitope_Rep1 1156.5288202569598 1156.5277299358602 85.772 2 0.1742140111730584 0.0006801564359802754 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 83652 7902 QEAEPPLTA True H1975_Epitope_Rep3 954.4658260775799 954.46472993586 35.368 2 0.17420915807128862 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 76496 8065 NTDHQTQLLY True H1975_Epitope_Rep2 1231.5833154413099 1231.5822099358602 35.969 2 0.17420378564749822 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 39787 14671 HQDPQSIFV True PC9_epitope_Rep3 1069.51925863277 1069.5181699358602 61.568 2 0.17419688102923597 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 53757 10883 KYFDEHYEY True PC9_epitope_Rep4 1292.53496826656 1292.53333490379 49.626 3 0.17419679951991757 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 43260 11730 IHDGLTVHL True PC9_epitope_Rep2 1003.54507945779 1003.5439899358599 50.452 2 0.1741871717404609 0.0006801564359802754 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 19969 4667 EM[Oxidation]EAELEDER True H1975_Epitope_Rep3 1265.5081618458098 1265.50706993586 23.075 2 0.17418424969328797 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 53777 18221 KYFEVPSVL True PC9_epitope_Rep6 1080.5855472874398 1080.5844499358602 82.73 2 0.17418397418224807 0.0006801564359802754 0.9438714419765777 ['ENSG00000131966|ENST00000254286|ACTR10'] 99975 20108 SLIRNLEQL True PC9_epitope_Rep1 1084.62405805448 1084.62296993586 82.175 2 0.17418151799855658 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 139238 11040 YTAEPVTL True H1975_Epitope_Rep3 892.45419876472 892.4536549679301 47.555 1 0.17417804304054807 0.0006801564359802754 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENST00000482611.5_1_10:103552686-103559078:-|nuORF', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 35172 15212 GSDEPAFMYY True H1975_Epitope_Rep2 1178.45902644498 1178.4579299358602 63.669 2 0.1741772190300995 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 97657 8421 SHDDGNIDL True PC9_epitope_Rep2 984.41485313388 984.41374993586 37.762 2 0.1741771475728646 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 8692 11110 AVDAVIAELK True H1975_Epitope_Rep3 1027.5913609438699 1027.59026993586 47.829 2 0.17417391963618725 0.0006801564359802754 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 103263 20261 SQTDFSQLL True PC9_epitope_Rep4 1037.50293986229 1037.5023749679299 86.077 1 0.17417106742967717 0.0006801564359802754 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 103717 5095 SREESAGPAL True PC9_epitope_Rep2 1015.4934378077497 1015.49234993586 24.974 2 0.1741675248991012 0.0006801564359802754 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 120171 16027 VFLENVIR True PC9_epitope_Rep6 988.5705659296399 988.56946993586 73.973 2 0.1741665991198743 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 41212 11333 IADLNELRY True H1975_Epitope_Rep2 1105.57677350889 1105.57566993586 48.641 2 0.17416394524993112 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'ENST00000565339.5_1_16:67848301-67859829:+|nuORF', 'ENST00000487120.5_1_16:67848301-67859829:+|nuORF', 'ENST00000466164.5_1_16:67840937-67859829:+|nuORF'] 83608 5700 QDVDNASLAR True PC9_epitope_Rep5 1087.52580056519 1087.52470993586 26.92 2 0.17416244386412896 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 89782 15226 RFEEAHFTF True PC9_epitope_Rep2 1182.5458077337796 1182.54415490379 63.832 3 0.1741559709376966 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 20702 13040 EQISDIDDAVR True PC9_epitope_Rep3 1259.59935942827 1259.5982699358601 55.184 2 0.17415106375835435 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1', 'ENST00000502453.1_1_5:32599051-32601187:+|nuORF'] 132323 17511 VYLPNINKI True PC9_epitope_Rep4 1072.62808080576 1072.6269899358601 75.359 2 0.1741484488303988 0.0006801564359802754 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 88943 7498 REDENLQVP True H1975_Epitope_Rep3 1098.53055159246 1098.5294499358602 33.822 2 0.1741416726893801 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF'] 39268 18645 HLPDAAALLPV True PC9_epitope_Rep6 1115.63389446219 1115.63278993586 84.361 2 0.17413866000036665 0.0006801564359802754 0.9438714419765777 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 95069 21766 RYSIAFPLL True PC9_epitope_Rep5 1078.61751612206 1078.61640993586 88.752 2 0.17413407760300167 0.0006801564359802754 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 93451 6646 RSDPTSYAGY True H1975_Epitope_Rep3 1115.4883524273098 1115.48724993586 30.519 2 0.1741318739610087 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 129271 5238 VTDQASHIY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 25.215 2 0.17411051707722444 0.0006801564359802754 0.9438714419765777 ['ENST00000515608.5_1_8:6484738-6484828:-|nuORF'] 90848 5489 RKVSINNTGL True NCI_RA007_Epitope_Rep4 1100.63020606408 1100.62910993586 27.7 2 0.17411003175331885 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF'] 29482 14746 FVIETARQL True PC9_epitope_Rep4 1075.6025943339098 1075.6014899358602 64.655 2 0.1741059231956483 0.0006801564359802754 0.9438714419765777 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2'] 100164 19920 SLLENLEKI True PC9_epitope_Rep4 1057.60192562757 1057.60082993586 84.756 2 0.1741046210606235 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 96317 6594 SEEVTASQVAA True H1975_Epitope_Rep2 1090.51423282198 1090.5131299358602 30.274 2 0.17409885549232323 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 14750 17388 DVVLTQTPLSL True NCI_RA007_Epitope_Rep5 1184.6652541601197 1184.66414993586 73.664 2 0.17409317311042674 0.0006801564359802754 0.9438714419765777 ['CON__Q05B55'] 74125 12647 NHVTPPNVSL True PC9_epitope_Rep5 1076.56145779792 1076.56036993586 53.649 2 0.17409083207475504 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 98056 11270 SHTSVGNIL True PC9_epitope_Rep5 926.48214484806 926.48104993586 48.342 2 0.1740723472621758 0.0006801564359802754 0.9438714419765777 ['ENSG00000160190|ENST00000352133|SLC37A1', 'SLC37A1|p.F372Tfs*13|1|0.28|ENSG00000160190|chr21:42563854-42563857|TGTT/-|frameshift_variant', 'nc|ENSG00000134955|Q8TED4-3|SLC37A2', 'ENST00000526405.5_1_11:124933263-124955028:+|nuORF', 'nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'ENSG00000134955|ENST00000403796|SLC37A2'] 75648 20605 NQSELAVLL True PC9_epitope_Rep4 985.5444107514498 985.54330993586 87.411 2 0.17407082447101324 0.0006801564359802754 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 104895 7990 STFNQVVLK True NCI_RA007_Epitope_Rep3 1034.5760452328998 1034.57494993586 38.526 2 0.17406395086047832 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 71376 9557 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep3 983.4269984211501 983.42590993586 41.77 2 0.1740531264925789 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 27725 14716 FQDPYTRSL True PC9_epitope_Rep1 1125.54547338061 1125.54436993586 61.427 2 0.1740504821905569 0.0006801564359802754 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 114025 12581 TRMPDGPVAL True PC9_epitope_Rep6 1055.54336520563 1055.54226993586 59.835 2 0.17404751058886997 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 88932 6171 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 28.748 2 0.174044591693945 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 5022 22377 ALLELLHEL True PC9_epitope_Rep5 1049.61209638845 1049.61098993586 91.084 2 0.17403992009286862 0.0006801564359802754 0.9438714419765777 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF', 'ENSG00000161904|ENST00000293760|LEMD2'] 14103 13933 DSDSVPAFY True H1975_Epitope_Rep2 999.4185415319898 999.41744993586 58.742 2 0.17403736779979048 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 35040 7666 GRDENSVEL True PC9_epitope_Rep3 1017.4727023631699 1017.47160993586 34.486 2 0.17402664105696575 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 7547 18652 ASFNDTFVHV True PC9_epitope_Rep1 1135.5298233164701 1135.5287299358602 76.533 2 0.17402457029235444 0.0006801564359802754 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 86281 9614 QQDPQQYNV True PC9_epitope_Rep5 1118.49925146418 1118.49814993586 41.944 2 0.174022425781512 0.0006801564359802754 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 64619 14467 LREPLPATL True PC9_epitope_Rep4 1008.59678067748 1008.59568993586 63.558 2 0.17401552404785864 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 67232 11924 LTDLVDDNY True H1975_Epitope_Rep2 1066.48187006454 1066.48127496793 50.946 1 0.1740114558841289 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 130439 16634 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 69.229 2 0.17400639550686758 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 8728 12200 AVDPRFLAY True H1975_Epitope_Rep2 1050.5498304850598 1050.5487299358601 52.009 2 0.17400372504141828 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 137983 10659 YQAEHLLQT True PC9_epitope_Rep4 1101.5454733806098 1101.54436993586 48.749 2 0.17400295355558412 0.0006801564359802754 0.9438714419765777 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 73812 11318 NHDTGEYVL True PC9_epitope_Rep3 1046.46688870674 1046.4657899358601 48.542 2 0.17400165913933247 0.0006801564359802754 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 53938 7733 KYISKPENL True PC9_epitope_Rep1 1090.60225998074 1090.60116993586 34.566 2 0.1740003636476786 0.0006801564359802754 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 135503 12503 YEDRVTFLP True H1975_Epitope_Rep2 1138.56587447202 1138.56476993586 53.184 2 0.1740001910607878 0.0006801564359802754 0.9438714419765777 ['ENSG00000158769|ENST00000368026|F11R'] 6589 15714 APWKPTWPA True PC9_epitope_Rep6 1052.5443511817998 1052.54324993586 72.662 2 0.1739976776569725 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000150687|O95084-2|PRSS23', 'ENSG00000150687|ENST00000280258|PRSS23'] 93460 5043 RSEEGRLYY True H1975_Epitope_Rep2 1171.56218607391 1171.56108993586 24.48 2 0.17399204077925554 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100916|Q5PSV4-2|BRMS1L', 'ENSG00000100916|ENST00000216807|BRMS1L'] 87863 21751 QVLEDFPTI True PC9_epitope_Rep5 1060.54407639828 1060.5429699358601 88.694 2 0.1739846289997531 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 29353 22418 FVEETVYLL True PC9_epitope_Rep1 1111.58012755383 1111.57902993586 91.05 2 0.17398303074270924 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 86847 14740 QRQDIAFAY True PC9_epitope_Rep5 1110.5458077337798 1110.54470993586 61.696 2 0.17398029133774134 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 123532 19994 VIIDQLPDL True PC9_epitope_Rep6 1024.580461907 1024.57936993586 89.573 2 0.17397836998038593 0.0006801564359802754 0.9438714419765777 ['ENSG00000162337|ENST00000294304|LRP5', 'PPP6R3-LRP5|6|fusion', 'PPP6R3-LRP5|5|fusion', 'ENST00000529993.5_1_11:68154039-68171824:+|nuORF', 'nc|ENSG00000290796|A4QPB2-2|LRP5L', 'nc|ENSG00000290796|A4QPB2|LRP5L', 'ENSG00000070018|ENST00000261349|LRP6', 'LRP6|p.L805Ffs*10|2|0.2|ENSG00000070018|chr12:12159831-12159831|G/-|frameshift_variant', 'PPP6R3-LRP5|3|fusion', 'PPP6R3-LRP5|1|fusion', 'PPP6R3-LRP5|4|fusion', 'PPP6R3-LRP5|2|fusion'] 1197 5957 AEDDRHYNIP True H1975_Epitope_Rep3 1228.54726428576 1228.54561490379 27.926 3 0.1739754636489605 0.0006801564359802754 0.9438714419765777 ['ENSG00000154124|ENST00000284274|OTULIN'] 88484 12758 RAAEEFVNV True PC9_epitope_Rep5 1033.5192586327698 1033.5181699358602 54.08 2 0.17397155651608776 0.0006801564359802754 0.9438714419765777 ['ENSG00000132661|ENST00000254998|NXT1'] 129310 14212 VTDSGPTFNYL True H1975_Epitope_Rep1 1212.56626839484 1212.56567496793 59.845 1 0.17396963753870207 0.0006801564359802754 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 133195 4635 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 22.929 2 0.17396717383987065 0.0006801564359802754 0.9438714419765777 ['AluSp_dup17171|chr6:42956085-42956345:+|4.405465577973595|0.2092895351215914|4.4|502.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.0483672628645049|0.0949023208327711|3.47|501.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 129358 12075 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.5222499358601 51.459 2 0.1739622879497026 0.0006801564359802754 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 96866 5001 SESSDVLPK True NCI_RA007_Epitope_Rep4 960.47639076128 960.47528993586 25.717 2 0.17395306899697657 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 71148 4156 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 21.084 2 0.1739517545070579 0.0006801564359802754 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 47705 16587 IYPVKYTQTF True PC9_epitope_Rep5 1258.65977485686 1258.6586699358602 68.808 2 0.17394909792994784 0.0006801564359802754 0.9438714419765777 ['ENSG00000112378|ENST00000421351|PERP'] 75935 12585 NRESYEVSL True PC9_epitope_Rep5 1095.51965255559 1095.5185499358602 53.408 2 0.1739443156440059 0.0006801564359802754 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000502972.1_1_4:48859213-48862776:+|nuORF'] 24231 18095 EYVSQHLVF True PC9_epitope_Rep5 1120.5553097883198 1120.5542099358602 74.614 2 0.1739375640652572 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 62773 12523 LM[Oxidation]DHTIPEV True PC9_epitope_Rep5 1069.51139675145 1069.51028993586 53.169 2 0.173925070876076 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 109897 5238 THNPTNATL True PC9_epitope_Rep3 967.47230844035 967.47120993586 25.228 2 0.17392270716406424 0.0006801564359802754 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 89018 6621 REEEANVVLT True H1975_Epitope_Rep2 1158.5880664685797 1158.58696993586 30.376 2 0.17391919875166031 0.0006801564359802754 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 102758 3636 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 20.104 2 0.17391880266181795 0.0006801564359802754 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 38642 16558 HHLVIPSVL True PC9_epitope_Rep2 1013.6022004110899 1013.60110993586 68.929 2 0.17391034297013552 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 71145 3902 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 20.052 2 0.17390205411687876 0.0006801564359802754 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 138774 10360 YSDDNFGNY True H1975_Epitope_Rep2 1093.39886871657 1093.3977699358602 44.858 2 0.1739004577232597 0.0006801564359802754 0.9438714419765777 ['ENSG00000188177|ENST00000409871|ZC3H6'] 64261 18145 LQLDPAQIYRV True PC9_epitope_Rep6 1314.7295857521801 1314.7284899358601 82.431 2 0.17389680589757048 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000179750|ENST00000333467|APOBEC3B'] 40748 17138 HTVGELIEV True PC9_epitope_Rep5 995.5287606873098 995.52766993586 70.942 2 0.17389523236211585 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 19309 10566 ELLTTMGDR True PC9_epitope_Rep4 1034.5066453437398 1034.50554993586 48.38 2 0.1738811464160239 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL12A|p.R123G|1|0.11|ENSG00000101608|chr18:3255769-3255769|A/G|missense_variant', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 884 4024 ADLSEAANR True NCI_RA007_Epitope_Rep2 945.4515729957699 945.45046993586 20.29 2 0.17387220293682532 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 134348 12220 WSDGHLIYY True H1975_Epitope_Rep1 1152.52400966004 1152.52290993586 52.025 2 0.17386830308083248 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-4|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2'] 89199 11421 REIFFPETA True H1975_Epitope_Rep3 1108.5553097883198 1108.5542099358602 49.047 2 0.17386613756966798 0.0006801564359802754 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 140143 10997 YVSGELEHV True PC9_epitope_Rep1 1031.4923751785898 1031.4912699358601 47.188 2 0.17386078112186718 0.0006801564359802754 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 69706 18494 LVYQEPIPTA True PC9_epitope_Rep5 1129.60192562757 1129.60082993586 76.16 2 0.17385815812886463 0.0006801564359802754 0.9438714419765777 ['ENSG00000106588|ENST00000223321|PSMA2', 'ENST00000433579.1_1_7:42952135-42964395:-|nuORF', 'ENST00000411875.1_1_7:42961455-42966220:-|nuORF'] 112285 10873 TLYVGNLSR True PC9_epitope_Rep4 1021.5556441414899 1021.55454993586 49.586 2 0.17385815005336322 0.0006801564359802754 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000496452.5_1_2:70456348-70475673:-|nuORF', 'ENST00000481650.1_1_2:70456348-70475673:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1'] 132461 13827 VYNSEYYHF True PC9_epitope_Rep6 1220.5138388991602 1220.51274993586 64.992 2 0.17385778548155992 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 21879 11074 ESENVVCHFY True H1975_Epitope_Rep2 1225.50737361973 1225.50626993586 47.628 2 0.1738574818490931 0.0006801564359802754 0.9438714419765777 ['ENST00000463385.5_1_2:99938416-99949470:-|nuORF', 'nc|ENSG00000115514|O14530-2|TXNDC9', 'ENSG00000115514|ENST00000264255|TXNDC9'] 65007 11846 LSDIASALRY True H1975_Epitope_Rep3 1107.59242357303 1107.5913299358601 50.714 2 0.1738571954495504 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104365|O14920-4|IKBKB', 'nc|ENSG00000104365|O14920-2|IKBKB', 'ENSG00000104365|ENST00000520810|IKBKB', 'ENST00000518647.5_1_8:42129618-42174557:+|nuORF', 'ENST00000520201.5_1_8:42129679-42177019:+|nuORF', 'nc|ENSG00000104365|O14920-3|IKBKB'] 117222 12765 TYVENLRLL True NCI_RA007_Epitope_Rep3 1119.62880908175 1119.6277099358601 57.448 2 0.17385047296339318 0.0006801564359802754 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 85014 20438 QIFNGTFVKL True PC9_epitope_Rep3 1165.64954452633 1165.64844993586 83.87 2 0.17384630569753343 0.0006801564359802754 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 75448 8661 NQIDHEVTV True PC9_epitope_Rep2 1053.50908787189 1053.50798993586 38.68 2 0.17384554128861154 0.0006801564359802754 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 108213 6231 TEADVNPKAYP True H1975_Epitope_Rep2 1203.5771674317098 1203.57606993586 28.929 2 0.173826678293335 0.0006801564359802754 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 39347 4264 HLTGEFEK True NCI_RA007_Epitope_Rep4 959.47124581119 959.47014993586 22.731 2 0.17382323640442027 0.0006801564359802754 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000541630.5_1_12:131357386-131357560:+|nuORF', 'ENST00000464211.6_1_12:131357386-131359105:+|nuORF', 'ENST00000537745.5_1_12:131357386-131357560:+|nuORF'] 31823 9173 GEMWSEQSA True H1975_Epitope_Rep3 1023.39676054159 1023.39617496793 40.275 1 0.17382090057376898 0.0006801564359802754 0.9438714419765777 ['ENSG00000164104|ENST00000296503|HMGB2', 'ENST00000511316.1_1_4:174253953-174254163:-|nuORF'] 140580 18335 YYLTDVDRI True PC9_epitope_Rep2 1156.5764391557198 1156.57534993586 75.856 2 0.17381887971886928 0.0006801564359802754 0.9438714419765777 ['ENSG00000088256|ENST00000078429|GNA11'] 11842 15232 DHMRFISEL True PC9_epitope_Rep6 1146.54917886206 1146.5480899358602 70.689 2 0.1738173211896571 0.0006801564359802754 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 32317 15453 GFVTFDDHD True PC9_epitope_Rep1 1051.42468954159 1051.42358993586 64.26 2 0.1738058214983901 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 133514 18435 WHEDITQDL True PC9_epitope_Rep1 1155.5196525555898 1155.5185499358602 75.7 2 0.17380569109544788 0.0006801564359802754 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 114340 6580 TSDDVKEQIY True H1975_Epitope_Rep2 1196.55609763396 1196.55557496793 30.221 1 0.17380360521946103 0.0006801564359802754 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF'] 76800 11045 NVELDPEIQ True H1975_Epitope_Rep2 1055.51350454599 1055.51297496793 47.514 1 0.1737979248950998 0.0006801564359802754 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 21597 10862 ERSLNTDVL True PC9_epitope_Rep4 1045.54038800017 1045.53928993586 49.543 2 0.17379768719647248 0.0006801564359802754 0.9438714419765777 ['ENSG00000140829|ENST00000268482|DHX38', 'ENST00000569935.1_1_16:72137048-72138114:+|nuORF'] 103778 10630 SRFPQGAQL True PC9_epitope_Rep2 1002.5246783663797 1002.52358993586 46.201 2 0.17379309064458173 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 89067 9330 REELSNVLAA True H1975_Epitope_Rep2 1100.5825871653199 1100.5814899358602 40.848 2 0.17378758188458765 0.0006801564359802754 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 87069 12942 QSEIASM[Oxidation]LY True H1975_Epitope_Rep2 1056.47976227 1056.4786699358601 54.895 2 0.173786702257597 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 37580 18569 GYSEHFVEF True PC9_epitope_Rep5 1113.47672511445 1113.47562993586 76.45 2 0.1737791915900719 0.0006801564359802754 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 34461 13654 GQDEPLIHV True PC9_epitope_Rep2 1006.5083595958998 1006.50726993586 57.812 2 0.1737779043982293 0.0006801564359802754 0.9438714419765777 ['ENSG00000157778|ENST00000288607|PSMG3'] 89476 6453 REQLPPTTV True H1975_Epitope_Rep2 1039.5662088251897 1039.5651099358602 29.739 2 0.17377626692731107 0.0006801564359802754 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 139177 5341 YSSSRSDLY True H1975_Epitope_Rep2 1076.47745339044 1076.47634993586 25.593 2 0.17377560014690416 0.0006801564359802754 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000568578.5_1_X:135956303-135956645:-|nuORF'] 113585 12587 TRAEMILKV True PC9_epitope_Rep5 1059.6110508426298 1059.6099499358602 53.416 2 0.1737737921655074 0.0006801564359802754 0.9438714419765777 ['ENSG00000141252|ENST00000437048|VPS53', 'ENST00000541903.6_1_17:422370-426182:-|nuORF'] 61250 20846 LLDRFLATV True PC9_epitope_Rep5 1046.61243074162 1046.61132993586 85.234 2 0.173773185710483 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 17461 18469 EHGNFLITV True PC9_epitope_Rep2 1028.52909504048 1028.5279899358602 76.373 2 0.17377186045046744 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 123504 10237 VIHDNFGIVEG True H1975_Epitope_Rep1 1198.59823722946 1198.5971499358602 44.32 2 0.17376401523750093 0.0006801564359802754 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF'] 96767 8608 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48036993586 38.067 2 0.17376368075090948 0.0006801564359802754 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 21475 4804 ERQPGAASL True PC9_epitope_Rep2 927.4773938207899 927.47628993586 23.849 2 0.17375560245554825 0.0006801564359802754 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 105377 9337 STYTPENLLNK True NCI_RA007_Epitope_Rep3 1278.6455813446998 1278.64448993586 43.822 2 0.1737530530043247 0.0006801564359802754 0.9438714419765777 ['ENSG00000168672|ENST00000304916|LRATD2'] 77371 16530 NYLPQISHL True PC9_epitope_Rep6 1083.57129420563 1083.57018993586 76.023 2 0.1737444650344829 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ADCK1|p.N489Gfs*12|1|0.28|ENSG00000063761|chr14:77933283-77933289|CAACTTA/-|frameshift_variant', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 32495 10595 GGNFGFGDSR True PC9_epitope_Rep1 1012.4362572847999 1012.43516993586 45.647 2 0.1737383208460256 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 67598 10948 LTETVVTEY True H1975_Epitope_Rep2 1053.52300660053 1053.5224749679298 47.142 1 0.17373741172312349 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 135448 6116 YEAELGDAR True NCI_RA007_Epitope_Rep1 1022.4668887067398 1022.46578993586 27.827 2 0.17373458532510508 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 8803 22130 AVFPDDMPTL True PC9_epitope_Rep1 1104.51614739828 1104.5150499358601 89.936 2 0.1737291099889799 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 58706 21105 LFKNDPLFF True PC9_epitope_Rep2 1139.6015317047497 1139.6004299358601 86.639 2 0.17372274323846298 0.0006801564359802754 0.9438714419765777 ['ENSG00000103642|ENST00000261893|LACTB', 'nc|ENSG00000103642|P83111-2|LACTB'] 4433 17744 AIVKEIVNI True PC9_epitope_Rep5 997.6171817688898 997.61608993586 73.27 2 0.1737084467993917 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 106687 16002 SYANVQDGF True PC9_epitope_Rep1 999.4297749220299 999.42927496793 66.363 1 0.1736944934524323 0.0006801564359802754 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 111327 19992 TLIDLPGITKV True PC9_epitope_Rep4 1168.70672504928 1168.70562993586 85.033 2 0.17368915018156778 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3'] 39667 10729 HPTEDLVVSA True PC9_epitope_Rep1 1066.5294889632999 1066.52838993586 46.157 2 0.17368803493648732 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 22390 7226 ETETFPSKY True H1975_Epitope_Rep3 1100.5026055091198 1100.5015099358602 32.766 2 0.17368775073141532 0.0006801564359802754 0.9438714419765777 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2', 'nc|ENSG00000137501|Q9HCH5-12|SYTL2'] 136482 17587 YHIDVGTQTF True PC9_epitope_Rep3 1179.5560380643099 1179.5549499358601 72.837 2 0.17368063311899568 0.0006801564359802754 0.9438714419765777 ['ENSG00000118496|ENST00000237281|FBXO30'] 60483 10131 LILYYQGRS True NCI_RA007_Epitope_Rep5 1111.60259433391 1111.6014899358602 45.604 2 0.17367678086327112 0.0006801564359802754 0.9438714419765777 ['chr8:47971468-47972891|126|16.67|0.35|5.59|+|2|MCM4,None|1'] 9918 17103 AYPHNLMTF True PC9_epitope_Rep4 1092.50625142092 1092.5051499358601 73.792 2 0.17367578198967903 0.0006801564359802754 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 12322 11378 DITSDTSGDFR True PC9_epitope_Rep2 1212.5258601348398 1212.5247699358601 49.086 2 0.17366661328288494 0.0006801564359802754 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 83258 8350 QADTTRLEL True NCI_RA007_Epitope_Rep4 1045.54038800017 1045.53928993586 38.933 2 0.17366640374107478 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 101611 8104 SPFEVSVDK True H1975_Epitope_Rep1 1006.4971262058599 1006.49602993586 36.118 2 0.1736648840115386 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 54134 17968 KYNANFVTF True PC9_epitope_Rep1 1102.54474510462 1102.5441749679298 73.907 1 0.1736618867272417 0.0006801564359802754 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 96959 10465 SEVEVIHVP True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 45.316 2 0.17365741200370885 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 138071 6483 YQDTPKQI True PC9_epitope_Rep1 991.4974605590298 991.49636993586 29.742 2 0.17365230470868923 0.0006801564359802754 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 117093 15133 TYRNVMEQF True PC9_epitope_Rep2 1186.54409348162 1186.54298993586 63.467 2 0.17364818536334892 0.0006801564359802754 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 54129 11136 KYNANFVTF True NCI_RA007_Epitope_Rep3 1102.54474510462 1102.54364993586 50.905 2 0.1736426348214516 0.0006801564359802754 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 114040 8228 TRMSTVSEL True PC9_epitope_Rep6 1022.5066453437399 1022.5055499358599 41.232 2 0.17364046054454815 0.0006801564359802754 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 108442 5641 TEEKFIVKA True H1975_Epitope_Rep3 1063.5913609438699 1063.59026993586 26.735 2 0.17363756474035238 0.0006801564359802754 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 38773 11732 HHYEGAVVIL True PC9_epitope_Rep6 1136.5978433066398 1136.59674993586 56.279 2 0.17363671282094634 0.0006801564359802754 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 22973 17998 EVIKELAQI True PC9_epitope_Rep1 1041.6070110080097 1041.6059099358602 74.023 2 0.1736351234316109 0.0006801564359802754 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 11716 16676 DHFNAMTSL True PC9_epitope_Rep5 1034.4491304676199 1034.4480299358602 69.147 2 0.17363459831094072 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 104893 8837 STFNQVVLK True NCI_RA007_Epitope_Rep1 1034.5760452328998 1034.57494993586 38.373 2 0.17363368082617409 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 123294 16050 VHSEQVFAL True PC9_epitope_Rep5 1028.5290950404797 1028.5279899358602 66.724 2 0.17362497913001793 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 40736 13001 HTVEDLVKV True PC9_epitope_Rep5 1038.5709598524597 1038.5698699358602 55.017 2 0.1736231213859979 0.0006801564359802754 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 104777 7284 STDPEALHY True H1975_Epitope_Rep3 1031.45598966987 1031.4554749679298 32.992 1 0.17362209723809036 0.0006801564359802754 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 33030 17744 GIYTGFIKV True PC9_epitope_Rep6 996.5644179200399 996.56332993586 80.888 2 0.17361319225980665 0.0006801564359802754 0.9438714419765777 ['ENSG00000153179|ENST00000542104|RASSF3'] 138389 10463 YRDPGAVDL True PC9_epitope_Rep4 1004.4927095317598 1004.49160993586 47.958 2 0.1736037457628606 0.0006801564359802754 0.9438714419765777 ['ENST00000577240.1_1_17:73264046-73266276:-|nuORF', 'nc|ENSG00000125457|A9UHW6-2|MIF4GD', 'nc|ENSG00000125457|A9UHW6-3|MIF4GD'] 94072 20408 RVVDLITNL True PC9_epitope_Rep3 1041.6182443980501 1041.6171499358602 83.752 2 0.17360244623996174 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 108490 4746 TEEYPNKPP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 23.346 2 0.17359864782757534 0.0006801564359802754 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A'] 44571 10838 IPEVFLTK True H1975_Epitope_Rep3 945.5535188831699 945.55242993586 46.769 2 0.17359542737889586 0.0006801564359802754 0.9438714419765777 ['CON__Q3MHN5', 'CON__ENSEMBL:ENSBTAP00000018229'] 107391 12713 SYSSTFHSL True PC9_epitope_Rep5 1027.46107505031 1027.45996993586 53.906 2 0.1735949759447612 0.0006801564359802754 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 139183 8137 YSTDVSVDEVK True NCI_RA007_Epitope_Rep1 1240.5823123818002 1240.5812099358602 35.649 2 0.17359393684058372 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148672|P00367-3|GLUD1', 'GLUD2|p.P408Qfs*23|1|0.53|ENSG00000182890|chrX:121048903-121048903|G/-|frameshift_variant', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1', 'GLUD1|p.G331Vfs*49|1|0.33|ENSG00000148672|chr10:87060982-87060982|C/-|frameshift_variant'] 113416 7838 TQLQTTQSV True PC9_epitope_Rep2 1004.5138388991599 1004.51274993586 35.519 2 0.17359126775569414 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.E636Q|2|0.14|ENSG00000143569|chr1:154254887-154254887|G/C|missense_variant'] 67562 7957 LTEQYNEQY True H1975_Epitope_Rep2 1186.51423282198 1186.5131299358602 35.554 2 0.17359111779576328 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 109628 14984 THDITTISI True PC9_epitope_Rep2 999.52367530687 999.52256993586 62.893 2 0.17359002890848713 0.0006801564359802754 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 63686 9285 LPPTVYEAVTK True H1975_Epitope_Rep1 1216.67033954056 1216.66924993586 40.626 2 0.1735895410863066 0.0006801564359802754 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 103873 21302 SRLEILNVL True PC9_epitope_Rep1 1055.63389446219 1055.63278993586 86.766 2 0.1735894902488714 0.0006801564359802754 0.9438714419765777 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1'] 104078 10623 SRVAVVNQI True PC9_epitope_Rep3 984.5716285588001 984.57052993586 45.81 2 0.17358630010360215 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'SPTBN1|p.A912V|1|0.12|ENSG00000115306|chr2:54629957-54629957|C/T|missense_variant', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 41967 6066 IEDEVTRQV True H1975_Epitope_Rep1 1087.55095268387 1087.54984993586 28.4 2 0.1735849160109878 0.0006801564359802754 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 40292 12974 HRQEIQVVL True PC9_epitope_Rep3 1120.63529144452 1120.6341899358601 54.933 2 0.17357693956490808 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 43403 10026 IHSEPLGV True PC9_epitope_Rep3 850.45486747106 850.45376993586 43.52 2 0.1735754682445546 0.0006801564359802754 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 116379 8089 TVYSGEEKL True PC9_epitope_Rep2 1024.5076908895599 1024.5065899358601 36.471 2 0.17357191061485822 0.0006801564359802754 0.9438714419765777 ['ENSG00000166224|ENST00000373202|SGPL1'] 81052 6372 PPAPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 31.113 2 0.17355848635222834 0.0006801564359802754 0.9438714419765777 ['MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'BOD1L1|p.V1300*|1|0.17|ENSG00000038219|chr4:13603002-13603002|C/-|frameshift_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000197483|ENST00000598519|ZNF628', 'RB1-CNIH3|1|fusion', 'nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'ENST00000413725.5_1_11:64533292-64535069:-|nuORF', 'ENSG00000038219|ENST00000040738|BOD1L1', 'nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2', 'nc|ENSG00000138162|O95359-5|TACC2', 'nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 25141 11597 FDQAFGLPR True NCI_RA007_Epitope_Rep1 1049.5294293936497 1049.52832993586 49.08 2 0.17355761466399477 0.0006801564359802754 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 137098 10421 YLDDPDLKY True H1975_Epitope_Rep1 1140.5339056374 1140.5333749679298 45.036 1 0.17355634629664599 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 9905 21395 AYPEYLITY True PC9_epitope_Rep5 1131.54882742555 1131.5477299358602 87.357 2 0.17355541056453458 0.0006801564359802754 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 54193 12576 KYPDRVPVI True PC9_epitope_Rep5 1085.62332977849 1085.62222993586 53.373 2 0.17354920011446678 0.0006801564359802754 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 35042 6411 GRDENSVEL True PC9_epitope_Rep4 1017.4727023631699 1017.47160993586 31.753 2 0.17354741034186694 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 89143 13925 REGDLLFTVA True NCI_RA007_Epitope_Rep2 1119.5924235730301 1119.5913299358601 58.82 2 0.1735471004090722 0.0006801564359802754 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 55719 8094 LDDLVSTGK True PC9_epitope_Rep2 946.49712620586 946.49602993586 36.492 2 0.17354656031158908 0.0006801564359802754 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 54200 17068 KYPENFFLL True NCI_RA007_Epitope_Rep2 1169.61209638845 1169.61098993586 71.128 2 0.17354282544274166 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 28458 12930 FSEQGINEFLR True H1975_Epitope_Rep3 1338.6568147347398 1338.6557099358602 54.963 2 0.17354231556996164 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 23785 5215 EYKTVHEEL True NCI_RA007_Epitope_Rep4 1146.5557037111398 1146.55460993586 26.594 2 0.17353737906519076 0.0006801564359802754 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 24488 16968 FAIPLIEKL True H1975_Epitope_Rep2 1042.64266824074 1042.6415699358602 70.514 2 0.1735327653962615 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 38977 6563 HIYYITGETK True NCI_RA007_Epitope_Rep1 1223.6186383208699 1223.61700490379 29.543 3 0.1735273221976972 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 128320 9144 VSDFGGRSL True PC9_epitope_Rep4 936.46649478392 936.46538993586 42.764 2 0.17352476005367876 0.0006801564359802754 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 135837 15144 YEQLMQLYSA True H1975_Epitope_Rep2 1244.57472490356 1244.57362993586 63.406 2 0.17351337779829656 0.0006801564359802754 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15'] 127218 11116 VQIEEVRQV True PC9_epitope_Rep5 1098.6033226098998 1098.6022299358601 47.747 2 0.1735113202785133 0.0006801564359802754 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 7178 17009 ARDETEFYL True PC9_epitope_Rep1 1142.5244035828598 1142.5233099358602 70.248 2 0.17350952389170882 0.0006801564359802754 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 31657 9768 GEHTLLVTV True NCI_RA007_Epitope_Rep3 967.5338460677499 967.53274993586 45.49 2 0.17350296184206676 0.0006801564359802754 0.9438714419765777 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 120101 13039 VFIDKQTNL True PC9_epitope_Rep1 1076.5866099166 1076.58550993586 55.024 2 0.1735025636093884 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 90913 20536 RLEEAFEFV True PC9_epitope_Rep5 1138.56587447202 1138.56476993586 84.035 2 0.17349907412636262 0.0006801564359802754 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4', 'nc|ENSG00000120875|Q13115-2|DUSP4'] 26780 13402 FLDSQNLSAY True H1975_Epitope_Rep2 1156.540053647 1156.53894993586 56.685 2 0.1734983766723653 0.0006801564359802754 0.9438714419765777 ['ENSG00000254986|ENST00000531863|DPP3', 'nc|ENSG00000254986|Q9NY33-4|DPP3'] 113994 20015 TRLPIDVQL True PC9_epitope_Rep1 1053.61824439805 1053.6171499358602 81.813 2 0.17349676885051654 0.0006801564359802754 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 26015 10951 FHDESTQVQL True PC9_epitope_Rep4 1202.5567663402999 1202.5556699358601 49.893 2 0.17348757152319613 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 48842 9089 KESDIYIVA True H1975_Epitope_Rep1 1036.54407639828 1036.5429699358601 39.864 2 0.1734822489061001 0.0006801564359802754 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 126340 9856 VPKNSDPWAA True PC9_epitope_Rep3 1083.53490869691 1083.53380993586 42.871 2 0.173481904074787 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 108620 9336 TEITHAVVI True H1975_Epitope_Rep2 981.5494961318899 981.54838993586 40.871 2 0.17347535499310476 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 48629 9766 KEIQETWTV True H1975_Epitope_Rep2 1132.57643915572 1132.57534993586 42.551 2 0.173474253131273 0.0006801564359802754 0.9438714419765777 ['ENSG00000140534|ENST00000268138|TICRR', 'nc|ENSG00000140534|Q7Z2Z1-2|TICRR'] 29599 19390 FVLDHEDGLNL True PC9_epitope_Rep4 1270.61936659686 1270.61826993586 82.694 2 0.17347389004473662 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 31894 4171 GEQGARIQSV True H1975_Epitope_Rep3 1043.53597132607 1043.5348699358601 21.161 2 0.17346521901429499 0.0006801564359802754 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 135685 11591 YEIAEGISA True H1975_Epitope_Rep2 951.4549270407099 951.4543749679301 49.65 1 0.17345695174967665 0.0006801564359802754 0.9438714419765777 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000481911.5_1_6:36446898-36449467:+|nuORF'] 93688 10800 RTLAEIAKV True PC9_epitope_Rep5 999.6076797143498 999.60658993586 46.532 2 0.1734547990910218 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 104365 20938 SSFPRFYFV True PC9_epitope_Rep2 1148.5654805492 1148.5643899358602 85.985 2 0.17345302309152574 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 26637 21607 FLADPSAFVAA True PC9_epitope_Rep5 1107.5600608155898 1107.5589699358602 88.151 2 0.17344598330237826 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 136581 20591 YHVDSLLQL True PC9_epitope_Rep1 1086.57095985246 1086.5698699358602 84.018 2 0.17344523341578197 0.0006801564359802754 0.9438714419765777 ['ENSG00000141002|ENST00000263346|TCF25'] 29641 21113 FVLPVATQI True PC9_epitope_Rep4 986.58006798418 986.57896993586 89.373 2 0.17344235072974687 0.0006801564359802754 0.9438714419765777 ['ENSG00000111678|ENST00000229281|C12orf57'] 105167 5989 STMSTNGIPR True NCI_RA007_Epitope_Rep2 1062.51279335334 1062.5116899358602 27.906 2 0.1734402887110809 0.0006801564359802754 0.9438714419765777 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 61941 18965 LLLNNDNLLR True PC9_epitope_Rep1 1196.6877209401998 1196.68662993586 77.732 2 0.17343897788233553 0.0006801564359802754 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 64493 17672 LQWNGKEFTA True PC9_epitope_Rep1 1192.58767254576 1192.58656993586 72.769 2 0.1734389617956592 0.0006801564359802754 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 124810 16592 VLLGKVYVV True PC9_epitope_Rep6 988.63210355704 988.63100993586 76.275 2 0.1734362429088701 0.0006801564359802754 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24|p.G413S|1|0.3|ENSG00000114796|chr3:183671046-183671046|G/A|missense_variant'] 26586 6787 FKDLGEENFK True NCI_RA007_Epitope_Rep3 1225.5979028762897 1225.5968099358602 33.802 2 0.17342524328276923 0.0006801564359802754 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 83741 6099 QEDAQRLYQA True H1975_Epitope_Rep3 1220.57856441404 1220.57746993586 28.472 2 0.17341452637229468 0.0006801564359802754 0.9438714419765777 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 87544 14288 QTISALIKA True PC9_epitope_Rep5 943.57023157647 943.56912993586 59.963 2 0.17341106266581313 0.0006801564359802754 0.9438714419765777 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF', 'VPS35|p.H565R|1|0.3|ENSG00000069329|chr16:46663116-46663116|T/C|missense_variant'] 128464 5883 VSESSDVLPK True H1975_Epitope_Rep3 1059.54480467427 1059.54370993586 27.638 2 0.17340522829550525 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 77118 7752 NYARGHYTI True PC9_epitope_Rep1 1093.5304920228102 1093.52938993586 34.639 2 0.17340400350739207 0.0006801564359802754 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 71905 11291 MPQSGTGVSV True PC9_epitope_Rep3 961.45388149489 961.45278993586 48.436 2 0.17339878126146696 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 86277 9676 QQDPQQYNV True PC9_epitope_Rep3 1118.49925146418 1118.49814993586 42.167 2 0.17338927268216756 0.0006801564359802754 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 106047 19068 SVLQSIEKI True PC9_epitope_Rep5 1015.5913609438699 1015.59026993586 78.374 2 0.17338690775677576 0.0006801564359802754 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 94633 7040 RYLDKTEQW True NCI_RA007_Epitope_Rep5 1237.6091362663299 1237.60750490379 33.758 3 0.17338565888752056 0.0006801564359802754 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 32419 5898 GGGQIIPTAR True NCI_RA007_Epitope_Rep5 968.5403284305199 968.53922993586 29.374 2 0.1733814224746921 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 52306 12328 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54290993586 52.277 2 0.17337886862373733 0.0006801564359802754 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 117035 7751 TYQEVAQKF True NCI_RA007_Epitope_Rep3 1112.5502244078798 1112.5496749679298 37.612 1 0.1733771154430198 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 38588 10300 HHGYSYIL True PC9_epitope_Rep4 988.4766655448 988.47556993586 47.306 2 0.17336338185719768 0.0006801564359802754 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 60152 20052 LHYGLPVVV True PC9_epitope_Rep3 995.5804023373499 995.57930993586 82.379 2 0.17335867050143602 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 94506 14645 RYIANTVEL True PC9_epitope_Rep5 1077.58185888933 1077.5807699358602 61.335 2 0.17335669498077735 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 130800 8985 VVESAYEVIK True NCI_RA007_Epitope_Rep2 1135.6124903112698 1135.6113899358602 39.558 2 0.17334910717315585 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 127059 18707 VPYPPLLRA True PC9_epitope_Rep3 1024.6069514383598 1024.60584993586 77.18 2 0.17334846177272187 0.0006801564359802754 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 93991 14230 RVPKTLVLV True PC9_epitope_Rep5 1023.6804507317898 1023.6793499358599 59.741 2 0.17334800075286913 0.0006801564359802754 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 71101 8157 METDPQTISA True H1975_Epitope_Rep3 1091.48049016555 1091.4793899358601 36.355 2 0.1733404634728186 0.0006801564359802754 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 44793 17826 IPTPIVGV True PC9_epitope_Rep6 794.49019035062 794.4896449679301 81.199 1 0.1733372418167739 0.0006801564359802754 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 92281 17108 RQLEEEGITFV True PC9_epitope_Rep4 1319.6721304457096 1319.6710299358601 73.81 2 0.1733362137089741 0.0006801564359802754 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 132001 20572 VYGPLPQSF True PC9_epitope_Rep1 1006.5123823471798 1006.51128993586 83.944 2 0.17332751610117927 0.0006801564359802754 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 106116 12970 SVNGVFKEV True PC9_epitope_Rep5 977.5181960036099 977.51708993586 54.899 2 0.17332623822979093 0.0006801564359802754 0.9438714419765777 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'ENST00000533440.1_1_11:62562405-62563999:-|nuORF', 'ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'ENSG00000162231|ENST00000294172|NXF1'] 44521 12162 IPAGTVTVNAA True PC9_epitope_Rep2 1012.55530978832 1012.55420993586 52.093 2 0.17331844875478652 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 21030 10902 ERDALNIET True PC9_epitope_Rep5 1059.51965255559 1059.5185499358602 46.922 2 0.17331631148461943 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 76224 16805 NRYGQLTIL True PC9_epitope_Rep2 1076.59784330664 1076.59674993586 69.888 2 0.1733094806196906 0.0006801564359802754 0.9438714419765777 ['ENST00000397656.8_1_12:111066004-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-4|TCTN1', 'ENST00000495659.6_1_12:111052207-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-3|TCTN1', 'nc|ENSG00000204852|Q2MV58|TCTN1', 'ENSG00000204852|ENST00000397659|TCTN1'] 61954 23778 LLLPDYYLVTV True PC9_epitope_Rep1 1307.73769082439 1307.7365899358601 96.258 2 0.17330921038188357 0.0006801564359802754 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 86566 16443 QRAWTVEQL True PC9_epitope_Rep1 1129.5880068989297 1129.5869099358601 68.073 2 0.1733062157570673 0.0006801564359802754 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 140094 14047 YVPETVYRV True PC9_epitope_Rep5 1124.5866099165999 1124.58550993586 59.045 2 0.17330613183645688 0.0006801564359802754 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 64539 9423 LRDENVNVV True PC9_epitope_Rep1 1056.5563724174801 1056.55526993586 41.104 2 0.17330496516838115 0.0006801564359802754 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 94603 15229 RYKLYQEMF True PC9_epitope_Rep4 1276.6274291827597 1276.6263299358602 66.508 2 0.17330187893253574 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 21376 6816 ERMAGNEAL True PC9_epitope_Rep3 989.4600295044899 989.4589299358599 31.235 2 0.17329494725442 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 131099 14359 VVMQEGLAHI True PC9_epitope_Rep4 1095.5746653339097 1095.5735699358602 63.139 2 0.1732946843131574 0.0006801564359802754 0.9438714419765777 ['ENSG00000152684|ENST00000274311|PELO'] 17276 21694 EHDDFFISL True PC9_epitope_Rep1 1121.50293986229 1121.50184993586 88.276 2 0.17329376808199287 0.0006801564359802754 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2', 'THOC2|p.E233D|1|0.61|ENSG00000125676|chrX:123686617-123686617|T/G|missense_variant'] 34675 9058 GQLDTPGVHNV True PC9_epitope_Rep4 1135.56218607391 1135.56108993586 42.423 2 0.17328547046854167 0.0006801564359802754 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 118220 8653 VAYGKGTYF True H1975_Epitope_Rep3 1004.4967322830399 1004.49562993586 38.28 2 0.17328546561330993 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14'] 75486 19371 NQINGSFAL True PC9_epitope_Rep3 962.48214484806 962.48104993586 79.734 2 0.17328354860300393 0.0006801564359802754 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 8084 11097 ATEFIM[Oxidation]NEY True H1975_Epitope_Rep2 1132.47467688956 1132.47356993586 47.719 2 0.1732808736592607 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 23891 11783 EYMKHTRLF True PC9_epitope_Rep3 1223.6121134717898 1223.61046490379 50.34 3 0.17327573213741768 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 127590 12995 VQYNEPLKV True PC9_epitope_Rep1 1088.5866099165999 1088.58550993586 54.856 2 0.17327502504300388 0.0006801564359802754 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 114171 7125 TRSTFSTNY True PC9_epitope_Rep4 1075.49343780775 1075.4923499358601 34.679 2 0.17327160114072526 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 105578 5979 SVEAAAELSAK True H1975_Epitope_Rep3 1074.55570371114 1074.55460993586 28.009 2 0.17326987471712824 0.0006801564359802754 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 45011 20801 IQLPSEKAIFL True PC9_epitope_Rep5 1257.7332741502898 1257.7321699358602 85.06 2 0.1732686409083884 0.0006801564359802754 0.9438714419765777 ['ENSG00000034713|ENST00000037243|GABARAPL2'] 132562 14392 VYPLMKEYF True NCI_RA007_Epitope_Rep5 1188.5889184157197 1188.58782993586 62.041 2 0.17326374747897358 0.0006801564359802754 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 54245 21615 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61098993586 88.182 2 0.17326257735813433 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 103618 13676 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.60010993586 60.495 2 0.1732617563163276 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 9236 13819 AVQIPFFAK True NCI_RA007_Epitope_Rep4 1019.5804023373499 1019.57930993586 60.397 2 0.1732590042461048 0.0006801564359802754 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD'] 23626 21941 EYFSYPVSL True PC9_epitope_Rep3 1103.51752729727 1103.51642993586 89.695 2 0.17325703465712525 0.0006801564359802754 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 138226 16318 YQTEIGQTL True PC9_epitope_Rep3 1051.51858992643 1051.51748993586 67.904 2 0.1732566201855196 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 107121 16778 SYM[Oxidation]GHFDLL True PC9_epitope_Rep6 1097.48518200361 1097.48408993586 77.035 2 0.173252456678151 0.0006801564359802754 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 113849 14680 TREGETIIEL True PC9_epitope_Rep6 1159.6084675599898 1159.60736993586 68.396 2 0.17325218682554866 0.0006801564359802754 0.9438714419765777 ['CD47|p.V146Cfs*18|1|0.19|ENSG00000196776|chr3:108071147-108071148|-/A|frameshift_variant', 'nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47'] 75941 19345 NRFLGDYVV True PC9_epitope_Rep1 1081.55564414149 1081.5545499358602 79.215 2 0.17324695279317348 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 138055 20892 YQDPVTLQL True PC9_epitope_Rep3 1075.55497543515 1075.5538699358601 85.637 2 0.173233799478896 0.0006801564359802754 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 35416 6372 GTDGQGGTFRY True H1975_Epitope_Rep2 1157.5101505010498 1157.50904993586 29.437 2 0.1732205072588938 0.0006801564359802754 0.9438714419765777 ['ENST00000487931.1_1_1:78444877-78481928:+|nuORF', 'ENSG00000162616|ENST00000370763|DNAJB4'] 135839 10956 YEQLSSEALEA True H1975_Epitope_Rep1 1238.56666231766 1238.5655699358601 47.106 2 0.17322047792121803 0.0006801564359802754 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 104013 18225 SRSETFLLL True PC9_epitope_Rep6 1064.5866099165999 1064.58550993586 82.745 2 0.17321466953679032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A'] 47391 8527 IYIKHPHLF True NCI_RA007_Epitope_Rep1 1166.66004964038 1166.6584049037901 37.17 3 0.17321452051417396 0.0006801564359802754 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 53734 8179 KYEELQIT True H1975_Epitope_Rep2 1022.5284263341399 1022.5273299358599 36.411 2 0.17320794616808105 0.0006801564359802754 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 35783 6051 GTVVTGTLER True H1975_Epitope_Rep3 1031.56112344475 1031.56002993586 28.288 2 0.1732049772225412 0.0006801564359802754 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 123648 14754 VILPTVHEV True PC9_epitope_Rep4 1005.5858816406101 1005.58478993586 64.685 2 0.17320175931894324 0.0006801564359802754 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 13203 16835 DLTEYLSR True PC9_epitope_Rep4 995.49237517859 995.49126993586 72.733 2 0.17320005220140725 0.0006801564359802754 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 97870 17735 SHLDYDITL True PC9_epitope_Rep4 1075.5185899264302 1075.51748993586 76.24 2 0.17319270981862847 0.0006801564359802754 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 106828 19038 SYIALPLTL True NCI_RA007_Epitope_Rep4 989.57973363101 989.57862993586 82.352 2 0.1731918069253269 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 75413 15869 NQFPGFKEV True PC9_epitope_Rep3 1064.52909504048 1064.5279899358602 66.189 2 0.17318779520086722 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 103867 20628 SRLALLTEL True PC9_epitope_Rep5 1014.60734536118 1014.60624993586 84.396 2 0.17318611950147483 0.0006801564359802754 0.9438714419765777 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 102973 8759 SQIQEFKEA True PC9_epitope_Rep5 1078.5294889632999 1078.52838993586 38.634 2 0.1731854162051834 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 103619 15746 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.60010993586 65.567 2 0.173183678919216 0.0006801564359802754 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 61824 17579 LLLAAARLAAA True PC9_epitope_Rep4 1052.67061432408 1052.66950993586 75.636 2 0.1731808177384001 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 104748 10945 STDLQDYTY True H1975_Epitope_Rep1 1104.46113461996 1104.46057496793 47.064 1 0.17317249878509172 0.0006801564359802754 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 132868 8725 VYTSGVYHI True NCI_RA007_Epitope_Rep3 1037.51819600361 1037.5170899358602 41.408 2 0.17314453757220577 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 26014 12427 FHDESTQVQL True PC9_epitope_Rep3 1202.5567663402999 1202.5556699358601 52.827 2 0.17313875082613275 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 58389 14836 LEVNLQAMK True PC9_epitope_Rep1 1044.5637662970398 1044.5626699358602 61.885 2 0.17312586871915714 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 139329 5221 YTDSEPRATY True H1975_Epitope_Rep2 1201.52513185885 1201.5240299358602 25.15 2 0.17312561438364546 0.0006801564359802754 0.9438714419765777 ['ENSG00000158480|ENST00000289431|SPATA2'] 115587 23273 TVIDQIPFL True PC9_epitope_Rep3 1044.58554728744 1044.5844499358602 94.797 2 0.173120893331526 0.0006801564359802754 0.9438714419765777 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 86772 21586 QRMDILDVL True PC9_epitope_Rep1 1101.5852300176098 1101.5841299358601 87.853 2 0.17312020549445037 0.0006801564359802754 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2', 'ENST00000564507.5_1_16:1551718-1556512:+|nuORF'] 68835 19340 LVDTFLEDVK True PC9_epitope_Rep2 1177.6230549949698 1177.6219499358601 79.765 2 0.17311995259015428 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 72405 15084 MTELPAPLSY True H1975_Epitope_Rep1 1120.5474475265598 1120.5468749679299 63.274 1 0.17311636447155432 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 91056 23083 RLLDVLAPLVL True PC9_epitope_Rep2 1220.7856440763198 1220.78454993586 94.28 2 0.17311614349513105 0.0006801564359802754 0.9438714419765777 ['ENSG00000182871|ENST00000651438|COL18A1'] 86012 14500 QPITPGPSI True PC9_epitope_Rep2 908.4967322830399 908.49562993586 61.043 2 0.17311401703505533 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 101745 14793 SPHGLVMVGV True PC9_epitope_Rep4 994.5269868654999 994.52588993586 64.84 2 0.1731090600063608 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 47329 20541 IYGYVAEQF True PC9_epitope_Rep1 1088.5178616504397 1088.51676993586 83.823 2 0.1731080656201098 0.0006801564359802754 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 11694 5848 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 27.893 2 0.17310440717371847 0.0006801564359802754 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 6326 5188 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 26.654 2 0.17309981983690464 0.0006801564359802754 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 43612 18912 IIIPEIQKV True PC9_epitope_Rep2 1051.66413196131 1051.66302993586 78.107 2 0.17309857892885186 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 94913 13683 RYPDRITLI True PC9_epitope_Rep4 1145.65569253593 1145.65458993586 60.521 2 0.1730944540795696 0.0006801564359802754 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 88926 6175 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 28.724 2 0.17309255363713202 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 17674 20573 EHSIATLLL True PC9_epitope_Rep1 995.56514619603 995.56404993586 83.948 2 0.17309042726474452 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 75737 10760 NRAAAQYYL True PC9_epitope_Rep2 1068.53524305008 1068.5341499358601 46.707 2 0.17308990845856886 0.0006801564359802754 0.9438714419765777 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4', 'ENST00000427137.1_1_7:46039864-46040332:-|nuORF'] 23935 15634 EYNNNFHVL True PC9_epitope_Rep5 1148.5250722892001 1148.5239699358601 65.147 2 0.17307556597170345 0.0006801564359802754 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 8129 9683 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51166993586 42.227 2 0.17307165465195493 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 93859 6220 RVFSWSQAK True NCI_RA007_Epitope_Rep3 1107.58252759567 1107.5814299358601 31.472 2 0.17306498234395215 0.0006801564359802754 0.9438714419765777 ['ENST00000286692.8_1_1:111682258-111682414:-|nuORF'] 93896 21909 RVIDYILDL True PC9_epitope_Rep2 1118.63356010902 1118.6324699358602 89.749 2 0.17306252534533215 0.0006801564359802754 0.9438714419765777 ['ID3|p.Q71K|1|0.16|ENSG00000117318|chr1:23559216-23559216|G/T|missense_variant', 'ENSG00000117318|ENST00000374561|ID3'] 89937 18977 RFVNVVPTF True PC9_epitope_Rep4 1077.5971150306498 1077.5960099358601 81.086 2 0.1730624580233367 0.0006801564359802754 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 38030 4622 HEISEGNVATA True H1975_Epitope_Rep1 1126.52546621202 1126.52436993586 22.804 2 0.17305235978509875 0.0006801564359802754 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1'] 96973 14421 SEVGDTQVVVF True H1975_Epitope_Rep2 1178.58191845898 1178.58082993586 60.622 2 0.17305046694334936 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000475205.1_1_21:30434643-30435788:-|nuORF'] 137019 5193 YKPLDLRPK True NCI_RA007_Epitope_Rep5 1128.6655289436399 1128.6638849037902 26.67 3 0.17304586189168633 0.0006801564359802754 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000373570.8_1_9:127620199-127620799:-|nuORF'] 138007 7607 YQAVTATLEEK True NCI_RA007_Epitope_Rep5 1251.63468230783 1251.63358993586 35.956 2 0.17303126302781377 0.0006801564359802754 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 21297 6761 ERIQHAVQL True PC9_epitope_Rep2 1092.60399131624 1092.60288993586 31.413 2 0.17303113970588932 0.0006801564359802754 0.9438714419765777 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 4117 8547 AHTAEVNCL True PC9_epitope_Rep5 956.43856578392 956.43746993586 37.82 2 0.17302728336501907 0.0006801564359802754 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 89617 9185 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.54912993586 40.283 2 0.17302469741190202 0.0006801564359802754 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 139702 17049 YTVEDIQRL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 70.831 2 0.17301665267837887 0.0006801564359802754 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 40113 11006 HRDIVNLQV True PC9_epitope_Rep4 1092.6039913162401 1092.60288993586 50.112 2 0.17301580332499036 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1'] 96159 8161 SEEEISFRA True H1975_Epitope_Rep1 1066.49310345458 1066.49200993586 36.332 2 0.17301066799648382 0.0006801564359802754 0.9438714419765777 ['ENSG00000162928|ENST00000295030|PEX13'] 107273 20396 SYQKVIELF True PC9_epitope_Rep1 1125.6070110080097 1125.6059099358602 83.269 2 0.17300941030623898 0.0006801564359802754 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 22677 10515 ETTFLVDKY True H1975_Epitope_Rep1 1114.5546410819798 1114.55354993586 45.398 2 0.17300896095140791 0.0006801564359802754 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 140559 20444 YYLNEIQSF True PC9_epitope_Rep4 1175.5498900547097 1175.5487899358602 86.782 2 0.17299763679489755 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 129445 10497 VTELHVISY True H1975_Epitope_Rep2 1059.5600608155898 1059.5589699358602 45.395 2 0.17299490396180878 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 62906 12614 LMVDHVTEV True PC9_epitope_Rep4 1041.51648175145 1041.5153899358602 56.358 2 0.17299312419981983 0.0006801564359802754 0.9438714419765777 ['ENST00000602875.5_1_5:139930287-139937028:-|nuORF', 'ENSG00000213523|ENST00000336283|SRA1'] 140448 20082 YYFPVKNVI True PC9_epitope_Rep5 1141.6171817688898 1141.6160899358601 82.295 2 0.17298862969057088 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 65370 10417 LSEPSSLQY True H1975_Epitope_Rep2 1022.49204082542 1022.4909499358599 45.082 2 0.17298159265954496 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 140477 21383 YYIEGIENSVF True PC9_epitope_Rep4 1332.62378327096 1332.62268993586 90.418 2 0.17297499849110864 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 4861 21545 ALFVRLLALA True PC9_epitope_Rep4 1085.6961007959299 1085.69500993586 91.053 2 0.17297237011133595 0.0006801564359802754 0.9438714419765777 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000504185.5_1_5:135364744-135380547:+|nuORF'] 26235 16329 FHYEADGANVL True PC9_epitope_Rep5 1234.5618517207397 1234.56074993586 67.806 2 0.17295895100965916 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 47867 10942 IYTNLNQKI True PC9_epitope_Rep4 1105.61315901761 1105.61206993586 49.857 2 0.17295733793735527 0.0006801564359802754 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 103727 13356 SREPSQVIF True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 56.233 2 0.17295690109589243 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 98936 15094 SIYNGDMEKI True PC9_epitope_Rep3 1168.5434247752798 1168.5423299358602 63.195 2 0.17295249495573733 0.0006801564359802754 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 8446 6940 ATSPALFNR True NCI_RA007_Epitope_Rep3 975.51377932951 975.51268993586 34.405 2 0.1729522402521784 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 40922 6053 HVVFIAQR True NCI_RA007_Epitope_Rep4 968.55558457184 968.55448993586 29.899 2 0.1729491628991082 0.0006801564359802754 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 134202 20603 WRPEEGFVEL True PC9_epitope_Rep5 1260.6138872935996 1260.61278993586 84.298 2 0.17294532265262072 0.0006801564359802754 0.9438714419765777 ['ENSG00000182173|ENST00000333213|TSEN54', 'nc|ENSG00000182173|Q7Z6J9-2|TSEN54', 'ENST00000583454.1_1_17:73512940-73513526:+|nuORF'] 74043 20685 NHSFMPIVL True PC9_epitope_Rep5 1056.54263692964 1056.5415299358601 84.62 2 0.17294050227516533 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 131954 19269 VYFVAPAKF True PC9_epitope_Rep1 1040.5695033004797 1040.56840993586 78.92 2 0.17293862645121785 0.0006801564359802754 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 75678 16774 NQTPVTLQV True PC9_epitope_Rep3 998.5396597241801 998.53911496793 69.667 1 0.1729384350225154 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 35704 5419 GTQTVFPSK True NCI_RA007_Epitope_Rep4 963.5025459394699 963.50144993586 27.419 2 0.17293813111720588 0.0006801564359802754 0.9438714419765777 ['ENSG00000156463|ENST00000359120|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-3|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-2|SH3RF2', 'ENST00000511705.1_1_5:145435703-145442261:+|nuORF'] 52817 19129 KQVEEIFNL True PC9_epitope_Rep2 1118.5971746003 1118.5966749679299 78.95 1 0.1729307384470166 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 95362 14078 SAHLFEVEL True NCI_RA007_Epitope_Rep5 1043.52876068731 1043.52766993586 60.839 2 0.1729239819408458 0.0006801564359802754 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 97481 18029 SGLLKVWQV True PC9_epitope_Rep6 1028.6018660579198 1028.6007699358602 81.978 2 0.17291728652163105 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 54353 7122 KYQEVTNNL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 36.447 2 0.17290919285128367 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 57861 6895 LEQEIATYR True NCI_RA007_Epitope_Rep5 1121.57168812845 1121.5705899358602 33.204 2 0.1729032676266883 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16722254-16722455:-|nuORF', 'CON__P35900', 'KRT20|p.R372S|2|0.36|ENSG00000171431|chr17:40878170-40878170|G/T|missense_variant', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__Q61782', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312'] 89448 8261 REQDLPLAEA True H1975_Epitope_Rep2 1140.5775017848798 1140.57640993586 36.727 2 0.17289491798823883 0.0006801564359802754 0.9438714419765777 ['ENSG00000169895|ENST00000380155|SYAP1'] 76456 15653 NTATIFHEL True PC9_epitope_Rep4 1044.52400966004 1044.52290993586 68.136 2 0.172894424144405 0.0006801564359802754 0.9438714419765777 ['ENSG00000183735|ENST00000331710|TBK1'] 36607 20748 GVLKVFLENV True PC9_epitope_Rep4 1116.6542955536 1116.6531899358602 87.963 2 0.1728938877256245 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 28726 20805 FSWEGAFQHV True PC9_epitope_Rep1 1206.54580773378 1206.54470993586 84.852 2 0.17289104584686804 0.0006801564359802754 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 21125 12135 ERDQATVIL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 51.54 2 0.17288999562024865 0.0006801564359802754 0.9438714419765777 ['ENST00000495360.5_1_9:32987651-32989804:-|nuORF'] 95058 14253 RYSEYAEEF True PC9_epitope_Rep3 1192.5036681382796 1192.50256993586 59.91 2 0.1728836842389004 0.0006801564359802754 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 48368 8155 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54806993586 36.347 2 0.1728833956591196 0.0006801564359802754 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 116721 13172 TYKVISNEF True PC9_epitope_Rep4 1099.5549754351498 1099.5538699358601 58.564 2 0.17287944418997134 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 21399 12395 ERMPEQIRL True PC9_epitope_Rep5 1170.61792712822 1170.61682993586 52.674 2 0.1728781209277994 0.0006801564359802754 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 84723 17719 QHFNGLLEI True PC9_epitope_Rep6 1069.55564414149 1069.5545499358602 80.79 2 0.17287504009420204 0.0006801564359802754 0.9438714419765777 ['TNPO3|p.V807*|1|0.18|ENSG00000064419|chr7:128972437-128972437|C/-|frameshift_variant', 'nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3'] 69470 12400 LVSESSDILPK True PC9_epitope_Rep1 1186.6445187155398 1186.64342993586 52.557 2 0.17286771911868073 0.0006801564359802754 0.9438714419765777 ['CON__H-INV:HIT000292931'] 44246 15005 ILTERGYSF True PC9_epitope_Rep2 1084.55530978832 1084.5542099358602 62.972 2 0.17286576224515632 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 28368 14126 FSDLYNEVY True H1975_Epitope_Rep2 1148.50260550912 1148.5015099358602 59.49 2 0.17286184668874657 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 95842 5010 [Acetylation]-SDKPDM[Oxidation]AEIEK True NCI_RA007_Epitope_Rep1 1319.5914978632497 1319.59038993586 23.572 2 0.17286114052449122 0.0006801564359802754 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 85499 19926 QLIKELPEL True PC9_epitope_Rep1 1081.63831113629 1081.63720993586 81.464 2 0.1728575812452948 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 139974 21953 YVITDLTQL True PC9_epitope_Rep3 1064.57537652656 1064.57426993586 89.742 2 0.17284967407340418 0.0006801564359802754 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 60170 13854 LHYPSTTAL True PC9_epitope_Rep3 1001.51819600361 1001.51708993586 58.369 2 0.17283195405081375 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 35633 9193 GTLSSWNLK True NCI_RA007_Epitope_Rep3 1004.52909504048 1004.52798993586 43.255 2 0.17283093734750468 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 88230 13188 QYDPYTDSRF True PC9_epitope_Rep4 1290.55168095986 1290.5505899358602 58.625 2 0.17282827469062745 0.0006801564359802754 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 1628 8260 AEFVEVTK True PC9_epitope_Rep2 921.4807478657299 921.47964993586 37.131 2 0.1728278665415038 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 47428 12676 IYIKQIKTF True PC9_epitope_Rep2 1152.6906810623198 1152.68958993586 54.066 2 0.17282220486214378 0.0006801564359802754 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 65585 12244 LSGHLETVILG True NCI_RA007_Epitope_Rep1 1137.63937376545 1137.63826993586 51.595 2 0.1728213930125689 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 76896 8965 NVKVDPEIQ True PC9_epitope_Rep3 1040.5502244078798 1040.54912993586 39.431 2 0.17281918695970439 0.0006801564359802754 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.L163P|1|0.23|ENSG00000172867|chr12:52651655-52651655|A/G|missense_variant'] 106846 23102 SYIDVLPEF True PC9_epitope_Rep1 1081.53317736141 1081.53208993586 93.663 2 0.1728168057798755 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 69352 10879 LVQAFQFTDK True H1975_Epitope_Rep1 1195.62372370131 1195.62262993586 46.805 2 0.17281553996863694 0.0006801564359802754 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 22280 4611 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 22.858 2 0.17281428137235483 0.0006801564359802754 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 2519 8130 AEQSEIIQA True H1975_Epitope_Rep3 987.4872897981498 987.48618993586 36.248 2 0.1728100662510997 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63', 'nc|ENSG00000182923|Q96MT8-2|CEP63', 'ENSG00000182923|ENST00000675561|CEP63'] 113671 14281 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61278993586 62.833 2 0.1728095096318444 0.0006801564359802754 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 84636 14602 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.51274993586 60.989 2 0.17280892522151534 0.0006801564359802754 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 139924 19841 YVFPGVTRL True PC9_epitope_Rep1 1050.58621599378 1050.5851099358601 81.134 2 0.17280600763872003 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 75422 15588 NQFPGFKEV True PC9_epitope_Rep5 1064.52909504048 1064.5279899358602 64.968 2 0.17280258072633506 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 60605 6797 LISNASDALDK True H1975_Epitope_Rep1 1145.5928174958499 1145.59172993586 31.187 2 0.17280041358746587 0.0006801564359802754 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 104844 8204 STELNHLGY True H1975_Epitope_Rep2 1032.48762415132 1032.4870749679299 36.51 1 0.17279439126486995 0.0006801564359802754 0.9438714419765777 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 76165 6564 NRSEVQANL True PC9_epitope_Rep3 1029.52032126193 1029.51922993586 30.273 2 0.17279252130159942 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7', 'SMG7|p.V670Pfs*161|1|0.17|ENSG00000116698|chr1:183544947-183544951|TATGT/-|frameshift_variant'] 53436 10862 KVIDDTNITRL True PC9_epitope_Rep6 1286.7194149913 1286.71777490379 52.64 3 0.17278712858950696 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 11592 11300 DGYDYDGYR True PC9_epitope_Rep5 1122.42541781758 1122.4243299358602 48.458 2 0.17278670518258965 0.0006801564359802754 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 110852 12197 TKWSDPITL True NCI_RA007_Epitope_Rep3 1059.5600608155898 1059.5589699358602 55.109 2 0.17278065234990134 0.0006801564359802754 0.9438714419765777 ['ENSG00000243566|ENST00000334348|UPK3B'] 5312 8653 ALSGHLETV True PC9_epitope_Rep4 925.48689587533 925.48578993586 40.776 2 0.17277854408843848 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 14547 12510 DVDPETLSY True H1975_Epitope_Rep1 1037.45532096353 1037.45477496793 53.161 1 0.17277709388183943 0.0006801564359802754 0.9438714419765777 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 38741 7995 HHTTQQTFL True PC9_epitope_Rep3 1111.54105670651 1111.53994993586 35.731 2 0.17277439200953654 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 6965 7696 AQNPSLFVK True NCI_RA007_Epitope_Rep4 1002.5498304850599 1002.54872993586 36.267 2 0.17277276301155126 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117410|Q99437-2|ATP6V0B', 'ENSG00000117410|ENST00000472174|ATP6V0B'] 28831 11810 FTDIDGQVY True H1975_Epitope_Rep3 1056.4763907612798 1056.47587496793 50.574 1 0.17277209058211862 0.0006801564359802754 0.9438714419765777 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 35039 7577 GRDENSVEL True PC9_epitope_Rep3 1017.4727023631699 1017.47160993586 34.145 2 0.17277092525203813 0.0006801564359802754 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 140892 20872 YYVDFFKTL True PC9_epitope_Rep4 1194.5961119711399 1194.5950099358602 88.44 2 0.17276939463223626 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 29660 6969 FVM[Oxidation]QEEFSR True H1975_Epitope_Rep3 1187.5281094447498 1187.5270099358602 31.768 2 0.17276704992510447 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF'] 46817 11349 IVDSLTEM[Oxidation]Y True H1975_Epitope_Rep2 1085.49507798097 1085.49398993586 48.702 2 0.17276201795585183 0.0006801564359802754 0.9438714419765777 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant'] 17443 16464 EHGDQDYIW True PC9_epitope_Rep1 1161.47270236317 1161.4716099358602 68.154 2 0.1727619502640288 0.0006801564359802754 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 17792 19143 EHVPVVIGL True PC9_epitope_Rep1 961.5596668927699 961.55856993586 78.427 2 0.1727605467013998 0.0006801564359802754 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6', 'SOCS6|p.E434Gfs*2|1|0.26|ENSG00000170677|chr18:70325969-70325979|AGCACTCAAAT/-|frameshift_variant'] 83955 10431 QELEQTGLRP True PC9_epitope_Rep3 1169.6040508858898 1169.6029499358601 45.061 2 0.17275928758067632 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000226777|Q9NZY2|FAM30A'] 77397 17585 NYLSTMKNF True PC9_epitope_Rep1 1116.52738078832 1116.5262899358602 72.432 2 0.1727546214746614 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 24758 15401 FAYDGKDYL True PC9_epitope_Rep6 1090.4971262058598 1090.4960299358602 71.393 2 0.17274867865881524 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 22994 15755 EVIRELAGI True PC9_epitope_Rep6 998.5760452328998 998.57494993586 72.834 2 0.1727413601439286 0.0006801564359802754 0.9438714419765777 ['ENSG00000066654|ENST00000396083|THUMPD1'] 105816 9477 SVINPGAIYR True NCI_RA007_Epitope_Rep4 1088.59784330664 1088.59674993586 43.309 2 0.17273105302892688 0.0006801564359802754 0.9438714419765777 ['ENSG00000115232|ENST00000397033|ITGA4', 'ENST00000484404.1_1_2:182322441-182339919:+|nuORF', 'nc|ENSG00000115232|P13612-2|ITGA4', 'ITGA4|p.G389Efs*39|1|0.13|ENSG00000115232|chr2:181493336-181493336|G/-|frameshift_variant', 'ENST00000476089.1_1_2:182321937-182323202:+|nuORF', 'ENST00000465522.5_1_2:182322141-182350724:+|nuORF'] 127007 8189 VPYEIQKGQA True PC9_epitope_Rep1 1131.59242357303 1131.5913299358601 36.333 2 0.17272758204699282 0.0006801564359802754 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 137160 21316 YLDPSVLSGV True PC9_epitope_Rep5 1048.54407639828 1048.5429699358601 87.046 2 0.17272503467746547 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 4765 5596 ALEENNNFSK True PC9_epitope_Rep1 1164.54111627616 1164.54000993586 26.353 2 0.17272412079245208 0.0006801564359802754 0.9438714419765777 ['ENSG00000104435|ENST00000220876|STMN2', 'nc|ENSG00000104435|Q93045-2|STMN2'] 114145 8997 TRSPVKVTL True PC9_epitope_Rep1 999.60767971435 999.60658993586 39.454 2 0.1727209338779289 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 74170 6422 NHYQKQLEI True PC9_epitope_Rep4 1171.5985715826298 1171.59691490379 31.798 3 0.1727199325139989 0.0006801564359802754 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 89038 7674 REEEVTGPVIA True H1975_Epitope_Rep3 1198.61936659686 1198.61826993586 34.501 2 0.1727195029024708 0.0006801564359802754 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 7102 7318 AQYEDIANR True PC9_epitope_Rep5 1078.5043368446197 1078.5032299358602 33.11 2 0.17271876325871735 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 127948 10744 VRPPVQVY True PC9_epitope_Rep2 956.5443511817998 956.54324993586 46.645 2 0.1727119494273983 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 29247 19968 FVDEYDPTI True PC9_epitope_Rep3 1097.49170647225 1097.4906099358602 82.052 2 0.17270384352860235 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 5771 14693 APELLFFAK True NCI_RA007_Epitope_Rep4 1034.5800679841798 1034.5789699358602 63.933 2 0.17270193161377417 0.0006801564359802754 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 53919 6941 KYINTDAKF True NCI_RA007_Epitope_Rep2 1098.5709598524597 1098.5698699358602 31.619 2 0.17269585080667546 0.0006801564359802754 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 9879 23337 AYMQEPLFVEF True PC9_epitope_Rep5 1372.6373251601196 1372.63622993586 94.747 2 0.17269197978126738 0.0006801564359802754 0.9438714419765777 ['ENSG00000273611|ENST00000617429|ZNHIT3'] 103573 12130 SRDEYYHLL True PC9_epitope_Rep6 1194.56693710118 1194.56530490379 58.003 3 0.17268324051943343 0.0006801564359802754 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 7993 6466 ATDPNILGR True NCI_RA007_Epitope_Rep3 955.50869394907 955.50758993586 32.465 2 0.17268122147754328 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 14957 15076 DYQALRTSI True PC9_epitope_Rep5 1065.54547338061 1065.54436993586 62.997 2 0.1726754448751365 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 21373 16558 ERLYLQQTL True PC9_epitope_Rep5 1162.6346227381798 1162.63352993586 68.694 2 0.1726729245905371 0.0006801564359802754 0.9438714419765777 ['ENSG00000166135|ENST00000299163|HIF1AN', 'ENST00000478787.1_1_10:102296230-102304880:+|nuORF'] 116677 16441 TYIQKIFRM True PC9_epitope_Rep4 1198.65325000778 1198.65160490379 71.208 3 0.17267287586563448 0.0006801564359802754 0.9438714419765777 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 47581 12063 IYNGDMEKI True PC9_epitope_Rep3 1081.51139637101 1081.51028993586 51.443 2 0.17266788947237813 0.0006801564359802754 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 34678 20549 GQLEFRALL True PC9_epitope_Rep1 1045.59202965021 1045.59092993586 83.854 2 0.17264749335630375 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 11577 10936 DGTGVVEFVR True NCI_RA007_Epitope_Rep1 1077.5454733806098 1077.54436993586 46.531 2 0.17264599577889714 0.0006801564359802754 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 94376 13877 RYDNVTILF True NCI_RA007_Epitope_Rep3 1139.5975089534697 1139.59640993586 61.908 2 0.1726458417330397 0.0006801564359802754 0.9438714419765777 ['ENSG00000061918|ENST00000264424|GUCY1B1', 'nc|ENSG00000061918|Q02153-3|GUCY1B1'] 21415 11194 ERNLQSDVL True PC9_epitope_Rep1 1072.55128703704 1072.55018993586 47.939 2 0.1726368885765446 0.0006801564359802754 0.9438714419765777 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 22343 4841 ETEKMIEKY True H1975_Epitope_Rep3 1169.5638258666897 1169.56219490379 23.746 3 0.17263675587950836 0.0006801564359802754 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 113985 19393 TRLPEFSEL True PC9_epitope_Rep1 1090.56587447202 1090.56476993586 79.406 2 0.17263629733740132 0.0006801564359802754 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 97987 19655 SHSFVVNIL True PC9_epitope_Rep2 1014.5498304850599 1014.54872993586 80.988 2 0.1726323496173031 0.0006801564359802754 0.9438714419765777 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 91786 7063 RPLEPQPAP True PC9_epitope_Rep5 1003.5450794577899 1003.5439899358599 32.135 2 0.172623125673558 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 108825 6756 TEQPVTPEP True H1975_Epitope_Rep2 996.47639076128 996.47528993586 30.902 2 0.17262309261314734 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1'] 99968 20844 SLINVGLISV True PC9_epitope_Rep6 1013.6120963884499 1013.61098993586 92.949 2 0.17261845171807572 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 38182 7124 HESDFSGVTP True H1975_Epitope_Rep2 1074.4618033263 1074.4607099358602 32.336 2 0.17260785809839332 0.0006801564359802754 0.9438714419765777 ['ENSG00000096401|ENST00000371477|CDC5L'] 100152 22011 SLLDRFLATV True PC9_epitope_Rep4 1133.6444591458899 1133.6433699358602 92.886 2 0.17260340099394306 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 103151 20432 SQNDGFFAV True PC9_epitope_Rep2 983.4348603024699 983.43431496793 84.019 1 0.172601210871185 0.0006801564359802754 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 27346 21080 FMFDEKLVTV True PC9_epitope_Rep3 1227.62094681999 1227.6198499358602 86.366 2 0.17259683600193662 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 132325 22932 VYLPPEAFTF True PC9_epitope_Rep1 1182.5961119711399 1182.5950099358602 93.008 2 0.1725839919521055 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 11638 10850 DHASIQMNV True PC9_epitope_Rep4 1013.46002950449 1013.4589299358599 49.493 2 0.1725818419875611 0.0006801564359802754 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 61406 18937 LLEPFVHQV True PC9_epitope_Rep5 1080.59678067748 1080.59568993586 77.864 2 0.17257655297272748 0.0006801564359802754 0.9438714419765777 ['ENSG00000068745|ENST00000328631|IP6K2', 'nc|ENSG00000068745|Q9UHH9-3|IP6K2', 'nc|ENSG00000068745|Q9UHH9-6|IP6K2', 'nc|ENSG00000068745|Q9UHH9-2|IP6K2', 'nc|ENSG00000068745|Q9UHH9-4|IP6K2', 'nc|ENSG00000068745|Q9UHH9-5|IP6K2'] 132217 6617 VYKPAQNSW True NCI_RA007_Epitope_Rep3 1091.5399940773498 1091.5388899358602 33.087 2 0.1725725040580127 0.0006801564359802754 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 67292 5856 LTDPEAAKY True H1975_Epitope_Rep2 1006.4971262058598 1006.49602993586 27.513 2 0.17257081388344978 0.0006801564359802754 0.9438714419765777 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1', 'nc|ENSG00000177628|P04062-3|GBA1', 'ENST00000566701.5_1_1:155184905-155187601:-|nuORF', 'ENST00000486197.5_1_1:155184905-155187358:-|nuORF', 'ENST00000459805.5_1_1:155184905-155186549:-|nuORF', 'chr1:155236469-155237344|103|12.02|0.59|4.35|-|0|GBA1,None|1'] 90927 10544 RLELTELEA True H1975_Epitope_Rep3 1072.57643915572 1072.57534993586 45.624 2 0.17256994500904435 0.0006801564359802754 0.9438714419765777 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'ENST00000418039.2_1_15:78290504-78290759:-|nuORF', 'ENST00000491479.1_1_15:78290504-78294097:-|nuORF'] 93687 11119 RTLAEIAKV True PC9_epitope_Rep3 999.6076797143498 999.60658993586 47.767 2 0.17256884718656454 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 1448 7285 AEEIPSRIQA True H1975_Epitope_Rep2 1112.58258716532 1112.5814899358602 32.96 2 0.17256786380911976 0.0006801564359802754 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 90487 4273 RKAALEQDL True NCI_RA007_Epitope_Rep5 1042.5771078620598 1042.5760099358602 23.013 2 0.17256647885449794 0.0006801564359802754 0.9438714419765777 ['ENSG00000100292|ENST00000216117|HMOX1'] 21367 18606 ERLSYTQLL True PC9_epitope_Rep2 1121.6080736371698 1121.6069699358602 76.921 2 0.17256584971255629 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 73751 9792 NHANVVRLL True PC9_epitope_Rep2 1034.5985120129799 1034.59740993586 43.003 2 0.1725652709796015 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 77387 20242 NYLSIFRKF True PC9_epitope_Rep1 1186.6498788795 1186.6487899358601 82.688 2 0.17256351559377833 0.0006801564359802754 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 83706 5328 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 25.547 1 0.172562812737345 0.0006801564359802754 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 45415 9068 ISDSDYQAEY True H1975_Epitope_Rep3 1189.47751296009 1189.4764099358601 39.865 2 0.17256275289402678 0.0006801564359802754 0.9438714419765777 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3'] 25573 6158 FESPEVAER True H1975_Epitope_Rep3 1062.4981888350198 1062.49708993586 28.699 2 0.17256260007897326 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM', 'ENST00000602219.1_1_19:8553540-8553735:+|nuORF', 'ENST00000596295.1_1_19:8552895-8553735:+|nuORF', 'ICAM1-HNRNPM|1|fusion'] 35852 17592 GVAANDVIVHI True PC9_epitope_Rep3 1106.6084079903399 1106.60730993586 72.856 2 0.17256204087333124 0.0006801564359802754 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 24480 20616 FAIDPHLLLSV True PC9_epitope_Rep6 1223.69140933831 1223.6903099358601 92.03 2 0.17255100493758097 0.0006801564359802754 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 10006 19987 AYTLLGHEF True PC9_epitope_Rep5 1049.51819600361 1049.5170899358602 81.934 2 0.1725456088779267 0.0006801564359802754 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF', 'ENST00000425026.1_1_Y:10028050-10028227:-|nuORF'] 107747 9642 TALVELVK True H1975_Epitope_Rep3 871.5378688190299 871.53676993586 42.104 2 0.1725434417515621 0.0006801564359802754 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 72369 9066 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46397496793 39.858 1 0.17254231291118058 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 37587 7668 GYSFTTTAER True NCI_RA007_Epitope_Rep1 1131.51965255559 1131.5185499358602 33.819 2 0.17253271939771636 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 461 16956 AAMEDLTRL True PC9_epitope_Rep5 1018.5117307241799 1018.51062993586 70.239 2 0.17253153295792698 0.0006801564359802754 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000523646.1_1_8:109240494-109241379:-|nuORF'] 140330 10053 YYEEQHPEL True PC9_epitope_Rep4 1206.5193182024198 1206.51822993586 46.336 2 0.17252828159926786 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 31346 9256 GEALPHVVP True H1975_Epitope_Rep2 917.49706663621 917.49596993586 40.559 2 0.17252434552082593 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 105522 11518 SVDGVIKEV True PC9_epitope_Rep4 944.51786165044 944.51676993586 52.066 2 0.17252202668644587 0.0006801564359802754 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 104888 6172 STFDTQITK True NCI_RA007_Epitope_Rep3 1039.51858992643 1039.51748993586 31.281 2 0.1725186529976865 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 83098 20682 PYNDYFEYF True PC9_epitope_Rep6 1256.50260550912 1256.5015099358602 92.315 2 0.17251589841842355 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 102048 8595 SPPPPPPPP True PC9_epitope_Rep1 881.4647038787699 881.46360993586 37.896 2 0.17251296944870279 0.0006801564359802754 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 89793 13695 RFEEAHFTF True PC9_epitope_Rep6 1182.5458077337796 1182.54415490379 64.464 3 0.1725115751197739 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 132089 8350 VYIKHPVSL True PC9_epitope_Rep6 1054.61751612206 1054.61640993586 41.77 2 0.17250484804022004 0.0006801564359802754 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 62767 12483 LM[Oxidation]DHTIPEV True PC9_epitope_Rep1 1069.51139675145 1069.51028993586 52.883 2 0.1725043225216545 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 11697 6157 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 29.076 2 0.17249007133550334 0.0006801564359802754 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 95448 20350 SALPDIKVLTL True PC9_epitope_Rep4 1168.7067250492798 1168.70562993586 86.418 2 0.17248984967522257 0.0006801564359802754 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 41855 18852 IDTIEIITDR True PC9_epitope_Rep3 1187.63976768827 1187.6386699358602 77.737 2 0.17248657073489962 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 41114 16560 HYMSINDSF True PC9_epitope_Rep3 1112.45969515132 1112.4585899358601 68.839 2 0.17247234898294903 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 113903 10396 TRIEGSVQL True PC9_epitope_Rep4 1001.5505587610498 1001.54946993586 47.691 2 0.1724720286227071 0.0006801564359802754 0.9438714419765777 ['ENSG00000083838|ENST00000594369|ZNF446', 'ENST00000594468.1_1_19:58989018-58989420:+|nuORF', 'ENST00000391694.4_1_19:58988585-58991546:+|nuORF', 'nc|ENSG00000083838|Q9NWS9-2|ZNF446'] 138678 16485 YRTDMIQAL True PC9_epitope_Rep2 1109.55392988933 1109.55282993586 68.652 2 0.1724682180432138 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 137660 14147 YLYPDITRL True H1975_Epitope_Rep3 1152.6179100448799 1152.6168099358601 59.748 2 0.172463941595579 0.0006801564359802754 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 31683 6107 GEIESKFNQA True H1975_Epitope_Rep3 1121.53530261973 1121.5342099358602 28.502 2 0.17246358917869994 0.0006801564359802754 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 52488 9417 KPLQPLPNTA True PC9_epitope_Rep5 1077.61824439805 1077.6171499358602 41.177 2 0.1724585489952305 0.0006801564359802754 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'ENST00000436442.2_2_6:30314274-30314587:+|nuORF'] 35254 7837 GSLFLRTPK True NCI_RA007_Epitope_Rep2 1017.5971150306499 1017.59600993586 35.114 2 0.17245274782584877 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000437325.2_1_1:235901419-235901638:+|nuORF'] 120093 18430 VFHPSQDLVF True PC9_epitope_Rep4 1187.5975089534697 1187.59640993586 78.96 2 0.17244844172856028 0.0006801564359802754 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 31514 10479 GEEWKGYVV True H1975_Epitope_Rep3 1065.5131106231697 1065.51200993586 45.37 2 0.17244046609497235 0.0006801564359802754 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000497406.2_1_12:59414000-59414099:+|nuORF', 'ENST00000397390.3_1_9:19200870-19200993:-|nuORF'] 71194 11321 M[Oxidation]FLSFPTTK True NCI_RA007_Epitope_Rep3 1086.54196860374 1086.5408699358602 51.643 2 0.1724382438318966 0.0006801564359802754 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 58399 5264 LEVPESHTA True H1975_Epitope_Rep2 981.4767251144501 981.47562993586 25.316 2 0.172437985301677 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1', 'ENST00000552771.5_1_16:15690552-15694435:-|nuORF'] 13099 9249 DLSELGSVR True H1975_Epitope_Rep1 974.5032742154599 974.50216993586 40.487 2 0.17243437480178322 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 26227 16402 FHYEADGANVL True PC9_epitope_Rep1 1234.5618517207397 1234.56074993586 67.914 2 0.1724325692532017 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 56107 8606 LDLPVRQA True H1975_Epitope_Rep2 910.52361573722 910.52250993586 38.058 2 0.1724304442781 0.0006801564359802754 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000533680.1_1_11:9424848-9424938:+|nuORF'] 102884 12702 SQIALNEKL True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 53.73 2 0.17242007171066 0.0006801564359802754 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 120164 17712 VFLENVIR True PC9_epitope_Rep2 988.5705659296399 988.56946993586 73.411 2 0.17241232854930064 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 88137 21014 QWPPDPPLHF True PC9_epitope_Rep2 1232.59784330664 1232.59674993586 86.283 2 0.17240902190587729 0.0006801564359802754 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 60536 4861 LIPNASQAESK True H1975_Epitope_Rep3 1156.60880191316 1156.6077099358602 23.823 2 0.17240396094964527 0.0006801564359802754 0.9438714419765777 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF'] 76245 12624 NSDELQELY True H1975_Epitope_Rep2 1109.48768372097 1109.4871749679298 53.656 1 0.1723985500858296 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160209|O00764-2|PDXK', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 7828 10054 [Acetylation]-ATAEVLNIGKK True H1975_Epitope_Rep3 1184.6764878664596 1184.67538993586 43.709 2 0.17239853116647053 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS', 'ENST00000510584.1_1_4:57302478-57308067:+|nuORF'] 103646 15582 SRDMTMFVT True PC9_epitope_Rep1 1086.48380172418 1086.4827099358602 64.758 2 0.1723873196881277 0.0006801564359802754 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 30265 7306 GAAKDLPGV True PC9_epitope_Rep4 826.4548674710599 826.45376993586 35.432 2 0.17238704523128953 0.0006801564359802754 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 46482 19836 ITPDEFHFV True PC9_epitope_Rep2 1103.5287606873098 1103.52766993586 81.69 2 0.17238562645174801 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF', 'nc|ENSG00000153827|Q14669-4|TRIP12'] 91879 10693 RPNSLVGITSA True PC9_epitope_Rep4 1113.61422164677 1113.6131299358601 48.884 2 0.17238259589253732 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 90197 15933 RHIEIFTDL True PC9_epitope_Rep4 1142.6084079903399 1142.60730993586 69.212 2 0.1723711713575716 0.0006801564359802754 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 23964 11825 EYPDRIMNTF True NCI_RA007_Epitope_Rep3 1284.5808729131597 1284.5797699358602 53.632 2 0.17236480683591607 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 6900 8339 AQITGTEHL True PC9_epitope_Rep1 968.49270953176 968.49160993586 36.909 2 0.17235794124932052 0.0006801564359802754 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 98083 4841 SHVSGTTTL True PC9_epitope_Rep5 901.45051036661 901.44940993586 23.664 2 0.17235545567305194 0.0006801564359802754 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 106037 15431 SVLQLGNIVFK True NCI_RA007_Epitope_Rep4 1216.71795843932 1216.7168699358601 67.025 2 0.1723541238854648 0.0006801564359802754 0.9438714419765777 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 37572 18688 GYSEHFVEF True PC9_epitope_Rep1 1113.47672511445 1113.47562993586 76.673 2 0.1723501525374839 0.0006801564359802754 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 96401 16217 SEIDLVQIK True PC9_epitope_Rep1 1043.58627556343 1043.5851699358602 67.197 2 0.17234781707543986 0.0006801564359802754 0.9438714419765777 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 97127 8818 SFEPFSNK True NCI_RA007_Epitope_Rep1 954.44469671018 954.44358993586 38.303 2 0.1723407677311908 0.0006801564359802754 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 128476 9717 VSEYISSDGSY True H1975_Epitope_Rep1 1205.5088130883698 1205.50770993586 42.304 2 0.17233802769513656 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12'] 11529 8263 DGIVLGADTR True H1975_Epitope_Rep3 1015.52982331647 1015.52872993586 36.77 2 0.17233775346043123 0.0006801564359802754 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 107723 15418 TALLKIEGV True PC9_epitope_Rep6 942.57498260374 942.57388993586 71.461 2 0.17233366604199235 0.0006801564359802754 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 114832 12091 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.49807496793 51.521 1 0.1723168774645538 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 34513 6455 GQDVGRYQV True PC9_epitope_Rep6 1020.49885754136 1020.49776993586 33.462 2 0.172314131215112 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 20622 5240 EQEVNILKK True NCI_RA007_Epitope_Rep1 1099.62372370131 1099.62262993586 24.465 2 0.17231172527265054 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 115843 6772 TVNDLPVGR True NCI_RA007_Epitope_Rep2 969.5243440132099 969.52324993586 30.956 2 0.17230689561381027 0.0006801564359802754 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 109708 20744 THFLQPIYL True PC9_epitope_Rep3 1130.6124307416198 1130.61132993586 85.059 2 0.17229735147571953 0.0006801564359802754 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000534279.1_1_1:154558555-154560745:-|nuORF', 'ENST00000530954.1_1_1:154558222-154560745:-|nuORF'] 119118 6152 VEILANDQGNR True NCI_RA007_Epitope_Rep1 1227.6207635791898 1227.6191249037902 27.967 3 0.17229371743899322 0.0006801564359802754 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 70619 12675 MADPNIRFL True H1975_Epitope_Rep2 1075.54845058607 1075.5473499358602 53.855 2 0.17228993664937606 0.0006801564359802754 0.9438714419765777 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 65140 5315 LSDREHPLY True H1975_Epitope_Rep3 1128.55637241748 1128.55471490379 25.52 3 0.1722865696112977 0.0006801564359802754 0.9438714419765777 ['ENSG00000153179|ENST00000542104|RASSF3'] 103690 14352 SRDQTVLGL True PC9_epitope_Rep1 987.5349086969098 987.53380993586 60.029 2 0.17228473811688852 0.0006801564359802754 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1'] 89398 5070 REMPVKVEA True H1975_Epitope_Rep2 1057.5590152697698 1057.5579099358602 24.584 2 0.1722843068404432 0.0006801564359802754 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 136176 20133 YGIPAIVKL True PC9_epitope_Rep2 972.60080342876 972.59970993586 82.852 2 0.17228348172646082 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 96848 20628 SESPIVVVL True PC9_epitope_Rep4 941.5433481222899 941.54279496793 87.502 1 0.17228194087699936 0.0006801564359802754 0.9438714419765777 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 119829 5972 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51676993586 28.042 2 0.17228006495279455 0.0006801564359802754 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 2789 7575 AEVDRQVIP True NCI_RA007_Epitope_Rep4 1025.5505587610498 1025.54946993586 35.787 2 0.17227367220376724 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 14055 9739 DSDHWAPIHY True H1975_Epitope_Rep1 1239.53088594563 1239.5297899358602 42.391 2 0.1722701230857012 0.0006801564359802754 0.9438714419765777 ['ENSG00000001631|ENST00000394505|KRIT1', 'nc|ENSG00000001631|O00522-2|KRIT1', 'ENST00000486261.5_1_7:91830052-91864980:-|nuORF', 'ENST00000475770.5_1_7:91830052-91864980:-|nuORF'] 126828 4892 VPSYPSKSA True PC9_epitope_Rep1 934.47599683846 934.47488993586 23.681 2 0.1722626479956648 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 23613 22873 EYFESPFTI True PC9_epitope_Rep1 1131.5124419168299 1131.51187496793 92.774 1 0.1722551954424904 0.0006801564359802754 0.9438714419765777 ['ENSG00000198938|ENST00000362079|MT-CO3'] 70214 23746 LYLPSFFTY True PC9_epitope_Rep3 1149.57464825057 1149.57354993586 96.624 2 0.1722514117680476 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 608 13561 AASGHFICV True PC9_epitope_Rep5 903.4272728242299 903.42616993586 57.185 2 0.17224304578339808 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000465134.5_1_2:74650023-74652276:+|nuORF', 'ENST00000468778.5_1_2:74649977-74650720:+|nuORF'] 113317 15109 TQILSVPKV True PC9_epitope_Rep4 983.6015317047498 983.60042993586 66.046 2 0.17223485336602878 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 126297 10316 VPIESIERA True PC9_epitope_Rep2 1012.5553097883198 1012.55420993586 45.009 2 0.1722315735816671 0.0006801564359802754 0.9438714419765777 ['ENSG00000167136|ENST00000372642|ENDOG'] 832 7675 ADEGISFR True NCI_RA007_Epitope_Rep1 893.42429561877 893.42318993586 33.846 2 0.1722255412841217 0.0006801564359802754 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 22215 8605 ETDIVVDHY True H1975_Epitope_Rep3 1089.49785448185 1089.4967499358602 38.09 2 0.17221681152450413 0.0006801564359802754 0.9438714419765777 ['CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 94486 11829 RYGSPINTF True PC9_epitope_Rep6 1053.52434401321 1053.5232499358601 56.706 2 0.17221548825399483 0.0006801564359802754 0.9438714419765777 ['ENSG00000188112|ENST00000341865|C6orf132'] 130797 8382 VVESAYEVIK True H1975_Epitope_Rep1 1135.6124903112698 1135.6113899358602 37.169 2 0.17220914986490923 0.0006801564359802754 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 132242 17484 VYKTIMEQF True PC9_epitope_Rep2 1157.57908200801 1157.5779899358602 72.508 2 0.1722089500020197 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 52309 11193 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54290993586 48.378 2 0.17220833179487763 0.0006801564359802754 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 31826 4849 GENPIYKSA True NCI_RA007_Epitope_Rep3 977.4818104948899 977.48070993586 26.06 2 0.17220684084832877 0.0006801564359802754 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1'] 133200 4973 WEAEAGRSP True H1975_Epitope_Rep3 1001.4566583762098 1001.45556993586 24.256 2 0.17220187286956326 0.0006801564359802754 0.9438714419765777 ['AluSp_dup17171|chr6:42956085-42956345:+|4.405465577973595|0.2092895351215914|4.4|502.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.0483672628645049|0.0949023208327711|3.47|501.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 9832 19439 AYLKGTVLF True PC9_epitope_Rep5 1010.5800679841799 1010.57896993586 79.823 2 0.17219777559216812 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 96244 8948 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 39.372 2 0.17218366677573285 0.0006801564359802754 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 71321 21037 MHFLENISL True PC9_epitope_Rep5 1102.5481162329 1102.5470099358602 85.978 2 0.17218241704143752 0.0006801564359802754 0.9438714419765777 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 75680 16816 NQTPVTLQV True PC9_epitope_Rep3 998.5396597241801 998.53856993586 69.835 2 0.1721799620402986 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 59912 20339 LHIGSVITL True PC9_epitope_Rep1 951.5753169569101 951.57420993586 83.064 2 0.17217954452176015 0.0006801564359802754 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 76064 20498 NRLQYLIDL True PC9_epitope_Rep2 1146.6397081186199 1146.6386099358601 84.276 2 0.17216056361640147 0.0006801564359802754 0.9438714419765777 ['ENSG00000137547|ENST00000260102|MRPL15'] 105708 12174 SVHKGFAFV True PC9_epitope_Rep1 990.5287011176598 990.52760993586 51.686 2 0.17216017146825763 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 5963 16771 APIWLEHAA True PC9_epitope_Rep3 1006.5236157372199 1006.52250993586 69.656 2 0.17215739862893886 0.0006801564359802754 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 57028 4732 LEEERTPTP True H1975_Epitope_Rep3 1070.52440358286 1070.5233099358602 23.327 2 0.17215166517149733 0.0006801564359802754 0.9438714419765777 ['ENSG00000086504|ENST00000199706|MRPL28', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 132319 18214 VYLPNINKI True PC9_epitope_Rep2 1072.62808080576 1072.6269899358601 75.377 2 0.17215064836251398 0.0006801564359802754 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 94990 9598 RYQDIIHSI True NCI_RA007_Epitope_Rep5 1143.6036569630699 1143.60254993586 43.561 2 0.17214853899174992 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 94994 13936 RYQDIIHSI True PC9_epitope_Rep2 1143.6036569630699 1143.60254993586 58.883 2 0.17214397784881205 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 65332 9309 LSELKPMSY True H1975_Epitope_Rep3 1066.53688284286 1066.53578993586 40.802 2 0.17214334999747033 0.0006801564359802754 0.9438714419765777 ['ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 25266 10341 FEDIITKPP True H1975_Epitope_Rep2 1058.56481184286 1058.56370993586 44.785 2 0.17213578368136423 0.0006801564359802754 0.9438714419765777 ['ENST00000481915.5_1_3:32574447-32611850:-|nuORF', 'ENSG00000144635|ENST00000273130|DYNC1LI1'] 8387 4869 ATPKFGPYQK True NCI_RA007_Epitope_Rep3 1135.6025943339098 1135.60093490379 26.137 3 0.1721355710782559 0.0006801564359802754 0.9438714419765777 ['ENSG00000150457|ENST00000382592|LATS2'] 43043 12735 IGGIGTVPVGR True PC9_epitope_Rep3 1024.6029286870798 1024.60182993586 54.007 2 0.17212670024258053 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 115287 14006 TVDNVQPLLY True H1975_Epitope_Rep2 1160.607739284 1160.60717496793 59.022 1 0.17212324287224703 0.0006801564359802754 0.9438714419765777 ['ENSG00000145332|ENST00000273963|KLHL8'] 86815 18003 QRPGIEDVAVL True PC9_epitope_Rep5 1195.6560864587498 1195.6549899358602 74.266 2 0.1721201606884783 0.0006801564359802754 0.9438714419765777 ['ENSG00000102189|ENST00000322349|EEA1'] 8572 14745 AVADDFCKV True PC9_epitope_Rep5 966.44806783846 966.44696993586 61.715 2 0.17211606552055927 0.0006801564359802754 0.9438714419765777 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 113408 21555 TQLNMFQTL True PC9_epitope_Rep3 1094.54303085246 1094.54192993586 88.205 2 0.17211327483494132 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 131500 18828 VVVDPIQSV True PC9_epitope_Rep2 954.53859709502 954.53750993586 77.791 2 0.1721082794565796 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 113992 19379 TRLPEFSEL True PC9_epitope_Rep5 1090.56587447202 1090.56476993586 79.589 2 0.17210474044071333 0.0006801564359802754 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 74148 11060 NHYNNIM[Oxidation]AL True PC9_epitope_Rep5 1104.50222905008 1104.50112993586 47.529 2 0.17210327024489713 0.0006801564359802754 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 72128 16370 MRENQITISL True PC9_epitope_Rep4 1203.6281574587497 1203.6270699358602 70.931 2 0.17209933177534503 0.0006801564359802754 0.9438714419765777 ['ENST00000264779.6_1_5:56531811-56531844:+|nuORF'] 60657 12879 LITPAVVSER True PC9_epitope_Rep5 1083.62880908175 1083.6277099358601 54.549 2 0.17209723192843454 0.0006801564359802754 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 76604 8528 NTFSVVPSPK True H1975_Epitope_Rep3 1074.5709598524597 1074.5698699358602 37.789 2 0.1720959683453 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 128461 5536 VSESHGQLSY True H1975_Epitope_Rep2 1105.50400249145 1105.50290993586 26.302 2 0.1720958919546828 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164164|Q01804-5|OTUD4', 'nc|ENSG00000164164|Q01804-3|OTUD4', 'ENSG00000164164|ENST00000447906|OTUD4', 'ENST00000237841.5_1_12:3950645-3951302:+|nuORF'] 40609 11304 HTDVGLLEY True H1975_Epitope_Rep2 1045.50802524273 1045.5069299358602 48.529 2 0.17209092707966755 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF'] 94275 20143 RWSPVRPLVF True PC9_epitope_Rep1 1255.71896149883 1255.7173049037901 82.309 3 0.17208859216118763 0.0006801564359802754 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 9564 20397 AYANIISQF True PC9_epitope_Rep4 1025.5181960036098 1025.5170899358602 86.604 2 0.17208777726375582 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 38570 20955 HHFLELVTL True PC9_epitope_Rep3 1107.60767971435 1107.60658993586 85.881 2 0.17208552590196297 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 132193 19927 VYKAFVMETF True PC9_epitope_Rep2 1233.6103821362897 1233.60928993586 82.047 2 0.1720728494486613 0.0006801564359802754 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 43304 10041 IHEPEPHIL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 43.947 2 0.17207107805319008 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 17017 13240 EGLPVALDK True PC9_epitope_Rep1 940.5229470308799 940.52184993586 55.794 2 0.17206631589907181 0.0006801564359802754 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000427559.1_1_2:112698001-112698598:-|nuORF'] 36401 16578 GVIDLIFEK True NCI_RA007_Epitope_Rep2 1032.58554728744 1032.5844499358602 69.213 2 0.17206570160368403 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 61229 19659 LLDPSVFHV True PC9_epitope_Rep4 1025.5545815123298 1025.5534899358602 83.737 2 0.17206438293264034 0.0006801564359802754 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 74065 13596 NHTIYINNL True PC9_epitope_Rep2 1100.5614577979202 1100.56036993586 57.586 2 0.17206085872709354 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 86859 15487 QRQQLLVSL True PC9_epitope_Rep4 1083.64004247179 1083.6389499358602 67.499 2 0.1720605196572821 0.0006801564359802754 0.9438714419765777 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 76542 11560 NTDPSIVM[Oxidation]TY True H1975_Epitope_Rep2 1155.51179067427 1155.51068993586 49.528 2 0.17206024720578433 0.0006801564359802754 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 128363 3790 VSDPSSPQYGK True NCI_RA007_Epitope_Rep4 1163.5458673034298 1163.5447699358601 20.755 2 0.17205617259447684 0.0006801564359802754 0.9438714419765777 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1'] 21553 17769 ERSDTFINL True PC9_epitope_Rep1 1093.54038800017 1093.53928993586 73.145 2 0.1720518066538572 0.0006801564359802754 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 84869 10971 QHQSGIVQL True PC9_epitope_Rep3 1008.5352430500798 1008.53414993586 47.185 2 0.17204646798312065 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 32504 8710 GGNFGFGDSR True PC9_epitope_Rep6 1012.4362572847999 1012.43516993586 43.359 2 0.17204208713914454 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 127960 9698 VRPPVQVY True PC9_epitope_Rep6 956.5443511817998 956.54324993586 47.693 2 0.1720414047541133 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 96844 21551 SESPIVVVL True PC9_epitope_Rep1 941.5433481222899 941.54279496793 87.717 1 0.17203954165847501 0.0006801564359802754 0.9438714419765777 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 76044 16959 NRLEEPGNFVL True PC9_epitope_Rep6 1286.6619001151798 1286.66080993586 77.778 2 0.17203925760350172 0.0006801564359802754 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 47888 8593 IYTSSVNRL True PC9_epitope_Rep6 1051.56620882519 1051.5651099358602 42.859 2 0.17203223432619333 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 90065 11949 RGLDIEGVKTV True PC9_epitope_Rep2 1185.67173652289 1185.6700949037902 51.284 3 0.1720301223120656 0.0006801564359802754 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000471144.1_1_20:47852594-47852858:+|nuORF', 'ENST00000484427.5_1_20:47852594-47860368:+|nuORF'] 93648 18382 RTFDETVSTYV True PC9_epitope_Rep3 1316.62484590012 1316.6237499358601 75.914 2 0.17202638528130212 0.0006801564359802754 0.9438714419765777 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 90883 11735 RLASYLDKV True PC9_epitope_Rep2 1063.60259433391 1063.6014899358602 50.471 2 0.17202625972294006 0.0006801564359802754 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P05784', 'ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 26677 11403 FLDASGAKLDY True H1975_Epitope_Rep1 1198.5870038394198 1198.5859099358602 48.841 2 0.17202085456893157 0.0006801564359802754 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1', 'ENST00000464483.1_1_2:201677931-201680272:+|nuORF'] 129409 5702 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.52347496793 26.929 1 0.17201613148086123 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 11632 12050 DHASIQMNV True PC9_epitope_Rep1 1013.46002950449 1013.4589299358599 51.209 2 0.17200293698819588 0.0006801564359802754 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 6668 8814 AQAPDLQRV True PC9_epitope_Rep1 996.5352430500799 996.53414993586 38.745 2 0.17200181408567963 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 117192 13439 TYTDVTPRQF True PC9_epitope_Rep5 1226.59315184902 1226.5920499358601 56.71 2 0.17199982099914443 0.0006801564359802754 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 131996 13771 VYGPLPQSF True NCI_RA007_Epitope_Rep3 1006.5123823471798 1006.51128993586 61.496 2 0.1719979598621319 0.0006801564359802754 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 82133 10661 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.4705499358602 46.032 2 0.17199630041028682 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 36646 20408 GVLPNIQAV True PC9_epitope_Rep5 909.5283667644899 909.52726993586 83.538 2 0.17198817717899198 0.0006801564359802754 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 48000 8137 KAINQGGLTSV True PC9_epitope_Rep2 1086.6033226099 1086.6022299358601 36.657 2 0.17198356037042403 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 40056 17816 HQYDGLVEL True PC9_epitope_Rep1 1072.5189242795998 1072.5178299358602 73.324 2 0.1719804143841697 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 38609 18329 HHIPDVITYL True PC9_epitope_Rep4 1206.63970811862 1206.6386099358601 78.571 2 0.17196841274505548 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 74161 6535 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59691490379 30.551 3 0.17195998871806872 0.0006801564359802754 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 2154 5309 AEMAEEAQQQA True H1975_Epitope_Rep2 1204.50301651528 1204.50190993586 25.472 2 0.1719590243412399 0.0006801564359802754 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 32318 14813 GFVTFDDHD True PC9_epitope_Rep2 1051.42468954159 1051.42358993586 62.242 2 0.1719560779386756 0.0006801564359802754 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 53565 11983 KVTEGLVDV True PC9_epitope_Rep2 958.5335117145798 958.53240993586 51.412 2 0.17194977694382374 0.0006801564359802754 0.9438714419765777 ['ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR'] 27771 7461 FQEENTEKL True PC9_epitope_Rep2 1136.5349682665599 1136.5338699358601 34.073 2 0.17194792571051457 0.0006801564359802754 0.9438714419765777 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 76659 22126 NTIPLFVQL True PC9_epitope_Rep4 1043.60153170475 1043.6004299358601 93.323 2 0.17194601116363123 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'JUP|p.R582Q|1|0.15|ENSG00000173801|chr17:41758427-41758427|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 100256 20397 SLLQTLYKV True PC9_epitope_Rep5 1063.62774645259 1063.62664993586 83.494 2 0.17194534290737679 0.0006801564359802754 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 86798 12593 QRNPQGFVL True PC9_epitope_Rep2 1057.5668775315298 1057.56578993586 53.749 2 0.17194390789649855 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 37513 17008 GYIERPQLI True PC9_epitope_Rep1 1087.6025943339098 1087.6014899358602 70.244 2 0.1719424534779179 0.0006801564359802754 0.9438714419765777 ['ENSG00000164329|ENST00000453514|TENT2', 'nc|ENSG00000164329|Q6PIY7-2|TENT2'] 70556 18408 LYVVDLKKF True PC9_epitope_Rep3 1123.6641319613097 1123.66249490379 76.013 3 0.17194238546341964 0.0006801564359802754 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 9614 22992 AYFDVPELI True PC9_epitope_Rep2 1065.5382627418498 1065.5371699358602 93.933 2 0.1719391588752112 0.0006801564359802754 0.9438714419765777 ['CLIP4|p.A344Hfs*6|1|0.23|ENSG00000115295|chr2:29152693-29152693|G/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 14018 21162 DRYQYPFVL True PC9_epitope_Rep3 1199.5975089534697 1199.59640993586 86.686 2 0.17193375880833273 0.0006801564359802754 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2', 'SGPP2|p.M182I|1|0.33|ENSG00000163082|chr2:222521934-222521934|G/A|missense_variant'] 132333 10105 VYLPTHTSL True NCI_RA007_Epitope_Rep1 1029.54949613189 1029.54838993586 43.317 2 0.17193369550112428 0.0006801564359802754 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 127037 19956 VPYLVGQVV True PC9_epitope_Rep4 972.5644179200399 972.56332993586 84.895 2 0.17193004059395559 0.0006801564359802754 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 75024 14479 NMDNMFESY True H1975_Epitope_Rep3 1149.41069635357 1149.4095899358601 61.053 2 0.17191438643907453 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 1552 9376 AEEVWARVA True H1975_Epitope_Rep3 1029.5243440132097 1029.5232499358601 41.065 2 0.17190985475030457 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 139432 16150 YTELEAIMY True H1975_Epitope_Rep3 1131.5158130451098 1131.51470993586 67.579 2 0.17190775357914098 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 9156 4331 AVNAHSNILK True NCI_RA007_Epitope_Rep2 1065.59309227937 1065.59198993586 21.484 2 0.1719009407743219 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF', 'ENST00000490238.5_1_2:86389097-86393741:-|nuORF', 'ENST00000435590.1_1_21:46097057-46097849:-|nuORF'] 22750 5500 EVANSTANLVK True H1975_Epitope_Rep3 1144.60880191316 1144.6077099358602 26.207 2 0.17188588860225024 0.0006801564359802754 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 153 11127 AADPSVVNL True H1975_Epitope_Rep2 884.46034677432 884.4597949679301 47.835 1 0.1718831742066275 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 114148 7364 TRSPVKVTL True PC9_epitope_Rep2 999.60767971435 999.60658993586 33.706 2 0.1718811128497719 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 26579 5261 FKDLGEEHFK True NCI_RA007_Epitope_Rep3 1248.6138872935996 1248.61225490379 27.698 3 0.17187231694644473 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 126035 13217 VPAPSPLSA True PC9_epitope_Rep1 837.45961849833 837.4590749679301 55.702 1 0.17187142232151795 0.0006801564359802754 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 117180 18879 TYTDRVFFL True PC9_epitope_Rep6 1160.5866099165999 1160.58550993586 85.266 2 0.1718704013570787 0.0006801564359802754 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 85808 4619 QLYWSHPRK True NCI_RA007_Epitope_Rep4 1213.6356257976897 1213.63399490379 24.182 3 0.17186857743221987 0.0006801564359802754 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 4064 13251 AHQQSIPAVL True PC9_epitope_Rep5 1062.5821932425 1062.58108993586 55.98 2 0.171865617234929 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 34169 18095 GPFSQFIKA True PC9_epitope_Rep4 993.5283667644898 993.52726993586 77.67 2 0.17186119800697125 0.0006801564359802754 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 117014 16410 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.5233099358602 68.258 2 0.17185719490803386 0.0006801564359802754 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 101844 6348 SPKAALRYAA True PC9_epitope_Rep1 1046.58727862294 1046.5861899358601 29.228 2 0.17185416262410105 0.0006801564359802754 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 116585 20331 TYGEIFEKF True PC9_epitope_Rep1 1132.54407639828 1132.5429699358601 83.034 2 0.17184708313743655 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 86587 11936 QRDETALQL True PC9_epitope_Rep5 1072.5512870370399 1072.55018993586 50.909 2 0.17183868325068327 0.0006801564359802754 0.9438714419765777 ['TRIP11|p.S1808Afs*25|2|0.16|ENSG00000100815|chr14:91975208-91975208|C/-|frameshift_variant', 'nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 35596 10500 GTITTFEHA True PC9_epitope_Rep5 975.4661604307499 975.46506993586 45.375 2 0.17183799527762406 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 123244 21547 VHNLLLTYL True PC9_epitope_Rep1 1084.62808080576 1084.6269899358601 87.702 2 0.1718350567176277 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1'] 24045 13581 EYQDLLNVK True PC9_epitope_Rep6 1120.5764391557198 1120.57534993586 63.978 2 0.17183468802318477 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 44601 19549 IPHLLGDVV True PC9_epitope_Rep2 961.55966689277 961.55856993586 80.578 2 0.17183086100385875 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 101267 22968 SLWQEIPVV True PC9_epitope_Rep5 1069.58079626017 1069.5796899358602 93.336 2 0.17182955465234692 0.0006801564359802754 0.9438714419765777 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'nc|ENSG00000050327|Q12774-2|ARHGEF5'] 60675 11608 LIVENLSSR True PC9_epitope_Rep2 1029.5818588893299 1029.5807699358602 49.977 2 0.17182882816693856 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6', 'ENSG00000116350|ENST00000373795|SRSF4', 'nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5'] 40849 9918 HVLEEVQQV True PC9_epitope_Rep6 1079.56112344475 1079.56002993586 48.66 2 0.17181800439687636 0.0006801564359802754 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 113634 10825 TRDANVIIL True NCI_RA007_Epitope_Rep3 1013.5869442697699 1013.58584993586 49.629 2 0.17181739186854492 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-4|CRB1', 'nc|ENSG00000134376|P82279-2|CRB1'] 45577 11936 ISGLIYEETR True PC9_epitope_Rep6 1179.6135529404298 1179.61244993586 57.158 2 0.1718134336703878 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.R46Q|1|0.39|ENSG00000278705|chr6:26027116-26027116|C/T|missense_variant'] 1812 12397 AEIDLFRAA True H1975_Epitope_Rep2 1004.5290950404799 1004.52798993586 52.77 2 0.17180740978672632 0.0006801564359802754 0.9438714419765777 ['ENSG00000167487|ENST00000300976|KLHL26'] 15785 8696 EDFSETLTR True NCI_RA007_Epitope_Rep2 1096.50366813828 1096.50256993586 38.473 2 0.17180290701274398 0.0006801564359802754 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 8026 9949 ATDRWYDEY True H1975_Epitope_Rep1 1217.49891711101 1217.4978299358602 43.206 2 0.17179382633064327 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5', 'ENST00000539304.1_1_12:7344181-7354515:+|nuORF'] 75432 8942 NQGESITHAL True PC9_epitope_Rep2 1068.51998690876 1068.5188899358602 39.753 2 0.17178628105987545 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 1955 6041 AEIPETSNA True H1975_Epitope_Rep2 930.4294405688601 930.4288949679301 28.214 1 0.1717853347474019 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 115394 9303 TVESLEETLK True H1975_Epitope_Rep3 1147.59723416995 1147.59612993586 40.779 2 0.1717804130523895 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 21479 5590 ERQPGAASL True PC9_epitope_Rep3 927.4773938207899 927.47628993586 26.579 2 0.17177466456080678 0.0006801564359802754 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 39868 12079 HQIEAVDGEEL True PC9_epitope_Rep2 1238.5778957076998 1238.57678993586 51.773 2 0.1717735628859097 0.0006801564359802754 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 77373 14195 NYLSHHLTI True PC9_epitope_Rep1 1096.5665431783602 1096.5654499358602 59.423 2 0.17176854867414945 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 88032 9418 QVTDFGFAK True NCI_RA007_Epitope_Rep4 1011.5025459394698 1011.50144993586 43.086 2 0.1717642855642891 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072062|P17612-2|PRKACA', 'ENSG00000072062|ENST00000308677|PRKACA', 'ENST00000536649.5_1_19:14208073-14223129:-|nuORF', 'nc|ENSG00000142875|P22694-10|PRKACB', 'nc|ENSG00000142875|P22694-4|PRKACB', 'nc|ENSG00000142875|P22694-3|PRKACB', 'nc|ENSG00000142875|P22694|PRKACB', 'nc|ENSG00000142875|P22694-5|PRKACB', 'nc|ENSG00000142875|P22694-7|PRKACB', 'nc|ENSG00000142875|P22694-6|PRKACB', 'nc|ENSG00000142875|P22694-9|PRKACB', 'ENST00000587533.1_1_19:14208360-14208546:-|nuORF', 'nc|ENSG00000142875|P22694-8|PRKACB', 'ENSG00000165059|ENST00000377276|PRKACG', 'ENSG00000142875|ENST00000370685|PRKACB'] 47561 22310 IYMDTLNIF True PC9_epitope_Rep4 1128.5525329069999 1128.5514299358601 94.055 2 0.1717563157756131 0.0006801564359802754 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 21240 14464 ERGPVLQL True PC9_epitope_Rep5 910.5236157372199 910.52250993586 60.637 2 0.1717522506969031 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000076706|P43121-2|MCAM', 'ENST00000528533.5_1_11:119181936-119187838:-|nuORF', 'ENSG00000076706|ENST00000264036|MCAM'] 117181 13204 TYTDVTPRQF True PC9_epitope_Rep1 1226.59315184902 1226.5920499358601 55.652 2 0.17175070364316863 0.0006801564359802754 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 27722 19027 FQDPVPLTV True PC9_epitope_Rep6 1014.5385970950199 1014.53750993586 85.829 2 0.17175020234116326 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 105625 7459 SVFDSSSDMEK True NCI_RA007_Epitope_Rep4 1230.50743318938 1230.50632993586 35.336 2 0.17174589424167774 0.0006801564359802754 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 60169 13759 LHYPSTTAL True PC9_epitope_Rep3 1001.51819600361 1001.51708993586 58.007 2 0.17174364243676304 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 11579 15746 DGTGVVEFVR True PC9_epitope_Rep1 1077.5454733806098 1077.54436993586 65.392 2 0.17173965809472494 0.0006801564359802754 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 84050 8890 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57746993586 39.107 2 0.17172848508400645 0.0006801564359802754 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 28799 10151 FTDEEVDEM[Oxidation]Y True H1975_Epitope_Rep2 1292.4754647352 1292.47436993586 44.045 2 0.17172633140309085 0.0006801564359802754 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 17348 10474 EHDPVGQMV True PC9_epitope_Rep5 1010.44913046762 1010.44802993586 45.275 2 0.17172307816074223 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 116713 20957 TYKNFFYLI True PC9_epitope_Rep4 1207.62774645259 1207.62664993586 88.772 2 0.1717230404990648 0.0006801564359802754 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 99172 21373 SLAQYLINV True PC9_epitope_Rep4 1019.5651461960299 1019.56404993586 90.379 2 0.1717226767203723 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 6353 5024 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 26.948 2 0.17172185892368236 0.0006801564359802754 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 54430 18433 KYTEITATYF True PC9_epitope_Rep5 1235.6074049308297 1235.60630993586 75.923 2 0.17172007671199568 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 45047 5566 IQNPTMINK True NCI_RA007_Epitope_Rep3 1057.55901526977 1057.5579099358602 28.887 2 0.17171636499462603 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 19358 5575 ELNITAAK True NCI_RA007_Epitope_Rep5 858.4810822188999 858.47998993586 28.131 2 0.17170709845888135 0.0006801564359802754 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 64616 15124 LREPLPATL True PC9_epitope_Rep2 1008.59678067748 1008.59568993586 63.434 2 0.17170405655867568 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 24050 12811 EYQELMNVK True PC9_epitope_Rep1 1152.54851015572 1152.54740993586 54.152 2 0.1717037916694262 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 102736 20226 SQDYPTLAF True PC9_epitope_Rep4 1040.48147614172 1040.4803699358602 85.939 2 0.1717034974480011 0.0006801564359802754 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 52815 19094 KQVEEIFNL True PC9_epitope_Rep2 1118.5971746003 1118.5960699358602 78.814 2 0.1717030740310411 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 64313 22762 LQMEQLNGILL True PC9_epitope_Rep5 1270.69550874258 1270.6944099358602 92.551 2 0.17169805493379534 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000510488.1_1_3:141189685-141190057:-|nuORF', 'ENST00000504966.2_1_4:145493783-145493942:+|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'ENST00000565278.1_1_16:72763309-72763579:+|nuORF'] 43734 20516 IITDLLRSV True PC9_epitope_Rep2 1028.62299542532 1028.62188993586 84.345 2 0.17169707894131953 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000162613|Q96AE4-2|FUBP1', 'ENSG00000162613|ENST00000370768|FUBP1', 'FUBP1|p.Q546Hfs*15|1|0.43|ENSG00000162613|chr1:77956623-77956639|GTGGCTGTGCTTGCTGT/-|frameshift_variant'] 56905 9885 LEDPVHAVV True H1975_Epitope_Rep2 977.5181960036099 977.51708993586 43.011 2 0.1716948321466853 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1'] 17158 15495 EHAEALLL True PC9_epitope_Rep1 894.4810822188999 894.47998993586 64.423 2 0.17168942407808419 0.0006801564359802754 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 129357 11981 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.5222499358601 51.092 2 0.1716863598006762 0.0006801564359802754 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 22128 9741 ESYSIYVYK True H1975_Epitope_Rep1 1150.55464108198 1150.55354993586 42.398 2 0.17168499562624157 0.0006801564359802754 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 123126 15898 VHDEGVWAL True PC9_epitope_Rep6 1024.4977949121999 1024.49668993586 73.431 2 0.17168245180680702 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 31576 10573 GEFSITYKP True NCI_RA007_Epitope_Rep2 1040.5178616504397 1040.51676993586 45.725 2 0.17167202641306462 0.0006801564359802754 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 40471 8452 HSDQQVFEY True H1975_Epitope_Rep3 1151.4883524273098 1151.48777496793 37.494 1 0.17167166584645224 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'SNTB2-CIRH1A|1|fusion'] 9406 8156 AVVIVDDR True PC9_epitope_Rep1 885.4919812557699 885.49088993586 36.202 2 0.17167113011751545 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 76897 7222 NVKVDPEIQ True PC9_epitope_Rep6 1040.5502244078798 1040.54912993586 36.888 2 0.1716577982604942 0.0006801564359802754 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.L163P|1|0.23|ENSG00000172867|chr12:52651655-52651655|A/G|missense_variant'] 92073 6810 RPSPPVQSV True PC9_epitope_Rep3 965.52942939365 965.52832993586 31.213 2 0.17165529420304426 0.0006801564359802754 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 138232 16180 YQTEIGQTL True PC9_epitope_Rep5 1051.51858992643 1051.51748993586 67.225 2 0.17165178408516113 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 95094 20311 RYSVFFQSL True PC9_epitope_Rep2 1145.58694426977 1145.58584993586 83.55 2 0.17165026075495463 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6', 'ENST00000497315.5_1_3:64004227-64005057:-|nuORF'] 133511 21027 WHDSDWIL True PC9_epitope_Rep5 1070.48214484806 1070.48104993586 85.938 2 0.17164133941393456 0.0006801564359802754 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50'] 28457 12916 FSEQGINEFLR True H1975_Epitope_Rep1 1338.6568147347398 1338.6557099358602 54.755 2 0.17163631872870588 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 89349 8847 REMEENFAV True NCI_RA007_Epitope_Rep4 1123.49680893603 1123.49570993586 40.842 2 0.17162915591468914 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 25196 8998 FEADPPGQV True H1975_Epitope_Rep3 958.4396113297399 958.43850993586 39.607 2 0.17162513251316305 0.0006801564359802754 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 86797 13731 QRNPQGFVL True PC9_epitope_Rep1 1057.5668775315298 1057.56578993586 57.663 2 0.1716217646728541 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 52033 18435 KLGDFGLATV True PC9_epitope_Rep4 1019.5651461960299 1019.56404993586 78.979 2 0.17162091276068567 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 24699 13412 FAVATPEEL True NCI_RA007_Epitope_Rep4 975.4913125494298 975.4907649679301 58.768 1 0.17161432623254028 0.0006801564359802754 0.9438714419765777 ['ENSG00000159461|ENST00000290649|AMFR', 'ENST00000492830.5_1_16:56419897-56437006:-|nuORF'] 87073 14256 QSEIASMLY True H1975_Epitope_Rep1 1040.48484727 1040.48374993586 60.019 2 0.1716094944105609 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 15150 12602 EAEPHPLWEY True H1975_Epitope_Rep2 1269.56660274801 1269.56550993586 53.57 2 0.1716092475537593 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 37967 7378 HEFLHEVPAA True H1975_Epitope_Rep2 1148.56145779792 1148.56036993586 33.32 2 0.1716087782408515 0.0006801564359802754 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 60516 5128 LIPAANTGESK True NCI_RA007_Epitope_Rep2 1099.58733819259 1099.58624993586 24.569 2 0.17160716653135055 0.0006801564359802754 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF'] 75476 16644 NQIKEFIYA True PC9_epitope_Rep5 1124.5866099165999 1124.58550993586 69.026 2 0.17160325793342102 0.0006801564359802754 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 132845 19675 VYTPTDTLVF True PC9_epitope_Rep6 1154.5859412102598 1154.5848499358601 88.337 2 0.17159331512886777 0.0006801564359802754 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 71198 18081 M[Oxidation]FLSFPTTK True PC9_epitope_Rep3 1086.54196860374 1086.5408699358602 74.747 2 0.17158975534743215 0.0006801564359802754 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 127953 11941 VRPPVQVY True PC9_epitope_Rep3 956.5443511817998 956.54324993586 50.952 2 0.1715888710998144 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 47514 14161 IYLLIHNNF True NCI_RA007_Epitope_Rep4 1145.62332977849 1145.62222993586 61.748 2 0.17158004398005575 0.0006801564359802754 0.9438714419765777 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 31643 7578 GEHGLIIRV True NCI_RA007_Epitope_Rep3 992.57671393924 992.57560993586 36.938 2 0.17157656440842584 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 35787 10087 GTVYEDLRY True H1975_Epitope_Rep3 1114.5294889632999 1114.52838993586 43.839 2 0.1715700515071459 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|494|14.5|0.62|4.54|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C'] 67552 5959 LTEQQKALY True H1975_Epitope_Rep2 1092.5815245361598 1092.5804299358601 27.903 2 0.17156934139950294 0.0006801564359802754 0.9438714419765777 ['ENSG00000143157|ENST00000367876|POGK', 'POGK|p.E62V|1|0.18|ENSG00000143157|chr1:166846664-166846664|A/T|missense_variant'] 82128 13094 PTDEITVYY True H1975_Epitope_Rep3 1099.50735653639 1099.50624993586 55.61 2 0.17156793729411457 0.0006801564359802754 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000474340.1_1_9:95003027-95004705:-|nuORF'] 62768 11785 LM[Oxidation]DHTIPEV True PC9_epitope_Rep2 1069.51139675145 1069.51028993586 50.663 2 0.17156384679333933 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 128463 5786 VSESSDVLPK True H1975_Epitope_Rep3 1059.54480467427 1059.54370993586 27.28 2 0.17156301143352412 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 26948 21448 FLIQHLPLV True PC9_epitope_Rep1 1078.65390163078 1078.6528099358602 87.338 2 0.17156112950814398 0.0006801564359802754 0.9438714419765777 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 414 10054 AALPKATIL True H1975_Epitope_Rep2 896.5695033004799 896.56840993586 43.664 2 0.17156096205042584 0.0006801564359802754 0.9438714419765777 ['ENSG00000108829|ENST00000225972|LRRC59'] 83880 12717 QEIATVVVP True H1975_Epitope_Rep3 954.5385970950199 954.53750993586 54.126 2 0.17155898355357876 0.0006801564359802754 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 76561 17447 NTDSLDWALY True H1975_Epitope_Rep2 1196.5349682665599 1196.5338699358601 72.402 2 0.1715572356452897 0.0006801564359802754 0.9438714419765777 ['ENSG00000108561|ENST00000225698|C1QBP'] 106335 10444 SVSDLFNTK True NCI_RA007_Epitope_Rep1 1009.50802524273 1009.50692993586 44.608 2 0.17155348414040544 0.0006801564359802754 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 102580 17659 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51289496793 72.938 1 0.17154776657061818 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 40835 13162 HVLDVIHEV True PC9_epitope_Rep6 1059.57129420563 1059.57018993586 62.271 2 0.17154590753324472 0.0006801564359802754 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 89402 4530 REMPVKVEA True NCI_RA007_Epitope_Rep3 1057.5590152697698 1057.5579099358602 24.687 2 0.17154426136867257 0.0006801564359802754 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 127577 19337 VQWENSFVSV True PC9_epitope_Rep6 1193.57168812845 1193.5705899358602 87.028 2 0.1715375917885235 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 76706 11156 NTPAM[Oxidation]YVAIQA True H1975_Epitope_Rep3 1193.57505963717 1193.57396993586 48.006 2 0.17153513885767796 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000428275.1_1_X:53172669-53172729:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 102705 9548 SQDPYHETL True PC9_epitope_Rep3 1088.4774533904401 1088.47634993586 41.675 2 0.1715323373092355 0.0006801564359802754 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 98035 10092 [Acetylation]-SHTILLVQPTK True H1975_Epitope_Rep3 1277.7343370957499 1277.7332299358602 43.86 2 0.17152685901242565 0.0006801564359802754 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 129178 9864 VTDESIPSY True H1975_Epitope_Rep2 1009.4604063439699 1009.4598749679301 42.928 1 0.17152578249824932 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant'] 102810 22147 SQFPEEILL True PC9_epitope_Rep2 1074.55972646242 1074.5586299358602 90.671 2 0.17151789849887172 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 21369 17901 ERLSYTQLL True PC9_epitope_Rep4 1121.6080736371698 1121.6069699358602 76.895 2 0.1715176327194246 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 101726 22161 SPGTALILLEA True PC9_epitope_Rep5 1083.61757569171 1083.61646993586 90.28 2 0.17151493265463744 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 34939 8327 GQWKKGFVL True NCI_RA007_Epitope_Rep3 1061.6022004110898 1061.6011099358602 39.87 2 0.17151162276015303 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 127011 7087 VPYEIQKGQA True PC9_epitope_Rep4 1131.59242357303 1131.5913299358601 34.528 2 0.17150425734880553 0.0006801564359802754 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 113597 10239 TRAQIEDTL True PC9_epitope_Rep1 1045.54038800017 1045.53928993586 44.265 2 0.17150376194718123 0.0006801564359802754 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 65094 14795 LSDLWDQEQY True H1975_Epitope_Rep2 1295.56699667083 1295.56588993586 62.067 2 0.17150337225867418 0.0006801564359802754 0.9438714419765777 ['ENSG00000095564|ENST00000265990|BTAF1', 'nc|ENSG00000095564|O14981-2|BTAF1'] 23995 14028 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 59.238 2 0.17150197476878504 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 23864 13053 EYMEHVYLI True NCI_RA007_Epitope_Rep3 1195.5583465634297 1195.55724993586 58.621 2 0.1714896762348738 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 117449 12649 VADTVARVL True PC9_epitope_Rep1 942.5498304850598 942.54872993586 53.523 2 0.17148566079338926 0.0006801564359802754 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 89802 9446 RFEEKHAYF True PC9_epitope_Rep5 1225.5880068989297 1225.58635490379 41.289 3 0.1714800627280866 0.0006801564359802754 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 120523 22327 VFYPYPQYF True PC9_epitope_Rep5 1222.5698972232997 1222.56937496793 90.89 1 0.17147968561526009 0.0006801564359802754 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1', 'HSDL1|p.V152M|1|0.34|ENSG00000103160|chr16:84130198-84130198|C/T|missense_variant'] 40462 9812 HSDPSILGY True H1975_Epitope_Rep3 987.46616043075 987.46561496793 42.768 1 0.171478452973133 0.0006801564359802754 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 36388 22129 GVIAEILRGV True PC9_epitope_Rep5 1025.6233297784897 1025.62222993586 90.154 2 0.1714748373803876 0.0006801564359802754 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 137406 21421 YLLPAIVHI True PC9_epitope_Rep3 1037.62735252977 1037.6262499358602 87.688 2 0.1714744964503679 0.0006801564359802754 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 49016 7318 KFIDTTSKF True NCI_RA007_Epitope_Rep5 1085.57571087973 1085.57460993586 34.826 2 0.17146622272616105 0.0006801564359802754 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 106791 19785 SYGDILHVI True PC9_epitope_Rep4 1015.53384606775 1015.5332749679301 84.23 1 0.17146568226189132 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 81751 19275 PSDIFMVMEY True H1975_Epitope_Rep2 1230.53008321026 1230.5289899358602 80.0 2 0.1714611296182089 0.0006801564359802754 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 96203 8018 SEEIESAFR True H1975_Epitope_Rep3 1066.49310345458 1066.49200993586 35.814 2 0.17145790870310637 0.0006801564359802754 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 44723 9795 IPQLNSKAV True PC9_epitope_Rep2 968.5654805492 968.56438993586 43.015 2 0.17145349378571006 0.0006801564359802754 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 8388 5300 ATPKFGPYQK True NCI_RA007_Epitope_Rep4 1135.6025943339098 1135.60093490379 26.94 3 0.17145171425517192 0.0006801564359802754 0.9438714419765777 ['ENSG00000150457|ENST00000382592|LATS2'] 94868 14432 RYNPNLNTW True PC9_epitope_Rep1 1176.5676058075198 1176.56650993586 60.336 2 0.17145142193966703 0.0006801564359802754 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 58278 11664 LETEVPVVA True H1975_Epitope_Rep2 955.5226126777098 955.5220649679301 49.937 1 0.17143985429927833 0.0006801564359802754 0.9438714419765777 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 57530 17498 LEKSFYQF True PC9_epitope_Rep1 1060.5229470308798 1060.52184993586 72.101 2 0.1714325062663015 0.0006801564359802754 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 97650 20980 SHAVFQIIL True PC9_epitope_Rep1 1026.58621599378 1026.5851099358601 85.525 2 0.17142809067456788 0.0006801564359802754 0.9438714419765777 ['KIF2A|p.L455Ifs*30|1|0.58|ENSG00000068796|chr5:62363794-62363800|TCTCATT/-|frameshift_variant', 'nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A', 'KIF2B|p.S616Ifs*2|1|0.35|ENSG00000141200|chr17:53824874-53824875|-/G|frameshift_variant', 'ENSG00000141200|ENST00000268919|KIF2B'] 54206 16134 KYPENFFLL True NCI_RA007_Epitope_Rep3 1169.61209638845 1169.61098993586 71.163 2 0.17142641737621245 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 32654 7934 GHLEKAVVL True PC9_epitope_Rep2 964.5705659296399 964.56946993586 35.884 2 0.1714237817550323 0.0006801564359802754 0.9438714419765777 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'ENSG00000134107|ENST00000256495|BHLHE40', 'ENSG00000123095|ENST00000242728|BHLHE41'] 88213 20432 QYASAFHFL True PC9_epitope_Rep1 1082.51853035678 1082.51742993586 83.404 2 0.17142340133960637 0.0006801564359802754 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 8081 13769 ATEFIMNEY True H1975_Epitope_Rep2 1116.47976188956 1116.47917496793 58.108 1 0.17142049101763052 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 87861 21698 QVLEDFPTI True PC9_epitope_Rep3 1060.54407639828 1060.5429699358601 88.753 2 0.17141409505012184 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 77229 18742 NYIEKVVAI True PC9_epitope_Rep5 1047.59644632431 1047.5953499358602 77.103 2 0.1714049069621651 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 53442 12396 KVIDEIYRV True PC9_epitope_Rep4 1133.64445914589 1133.64280490379 55.486 3 0.17139912319794356 0.0006801564359802754 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 119357 4995 VENIQRVAA True NCI_RA007_Epitope_Rep5 998.5508931142198 998.54978993586 25.917 2 0.17139911650877648 0.0006801564359802754 0.9438714419765777 ['ENSG00000173801|ENST00000393931|JUP'] 103719 6185 SREESAGPAL True PC9_epitope_Rep3 1015.4934378077497 1015.49234993586 28.831 2 0.1713990762511557 0.0006801564359802754 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 34511 8210 GQDVGRYQV True PC9_epitope_Rep5 1020.49885754136 1020.49776993586 36.519 2 0.17138594934325405 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 113482 9339 TQSEKQFVV True PC9_epitope_Rep5 1064.55022440788 1064.54912993586 40.876 2 0.17138294279909327 0.0006801564359802754 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 117425 5325 VADPETRTV True PC9_epitope_Rep5 986.50327421546 986.50216993586 25.495 2 0.17137857872328974 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000595792.1_1_19:50369586-50370764:-|nuORF', 'ENST00000594661.5_1_19:50367579-50369988:-|nuORF'] 43869 17324 ILDEFLQTY True H1975_Epitope_Rep2 1140.5702911461199 1140.56918993586 71.93 2 0.17137625485181354 0.0006801564359802754 0.9438714419765777 ['ENSG00000161956|ENST00000321337|SENP3', 'ENST00000580997.1_1_17:7468099-7469096:+|nuORF', 'ENST00000583277.1_1_17:7467715-7468388:+|nuORF'] 53909 19893 KYIESPVLF True PC9_epitope_Rep5 1094.60119735158 1094.60010993586 81.57 2 0.17137229137384713 0.0006801564359802754 0.9438714419765777 ['ENSG00000100304|ENST00000216129|TTLL12'] 136421 14862 YHFPDQQEL True PC9_epitope_Rep4 1175.52473793603 1175.52364993586 65.104 2 0.17137194177286483 0.0006801564359802754 0.9438714419765777 ['ENSG00000165490|ENST00000533655|DDIAS'] 102917 16685 SQIHDIVLV True PC9_epitope_Rep2 1022.5760452328999 1022.57494993586 69.424 2 0.17136380988125058 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 60161 13632 LHYPSTTAL True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 57.291 2 0.17136325671489946 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 47273 24020 IYEPNFIFF True PC9_epitope_Rep5 1188.5855472874398 1188.5844499358602 97.377 2 0.1713628791702698 0.0006801564359802754 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 7950 6988 ATDINGDDY True H1975_Epitope_Rep3 982.3879696796998 982.3874249679301 31.841 1 0.1713581890155623 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 33026 19587 GIYTGFIKV True PC9_epitope_Rep2 996.5644179200399 996.56332993586 80.724 2 0.17135673818336394 0.0006801564359802754 0.9438714419765777 ['ENSG00000153179|ENST00000542104|RASSF3'] 114190 13759 TRTSQVLVI True PC9_epitope_Rep1 1015.6025943339098 1015.60148993586 57.769 2 0.17135081410991293 0.0006801564359802754 0.9438714419765777 ['ENSG00000147689|ENST00000690554|FAM83A', 'nc|ENSG00000147689|Q86UY5-3|FAM83A', 'ENST00000521468.1_1_8:124195447-124212099:+|nuORF'] 46483 20094 ITPDEFHFV True PC9_epitope_Rep3 1103.5287606873098 1103.52766993586 82.543 2 0.17135034960366943 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF', 'nc|ENSG00000153827|Q14669-4|TRIP12'] 103407 20733 SQYEEQFVTL True PC9_epitope_Rep3 1242.5768330785397 1242.5757299358602 85.017 2 0.17134713553086992 0.0006801564359802754 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 45401 12124 ISDRLIGIY True H1975_Epitope_Rep3 1048.59169529704 1048.5905899358602 51.802 2 0.1713398811598731 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'SMC4|p.E1257Q|1|0.11|ENSG00000113810|chr3:160433711-160433711|G/C|missense_variant'] 88208 14522 QYAPSTAQF True PC9_epitope_Rep5 1011.4661604307499 1011.46506993586 60.857 2 0.1713361852135945 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 139093 10170 YSNKEIFL True H1975_Epitope_Rep1 1012.5229470308799 1012.52184993586 44.058 2 0.1713352866195091 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 136661 8041 YIDQEELNK True PC9_epitope_Rep5 1150.5506183307 1150.5495299358602 35.867 2 0.1713337854158456 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 138553 19990 YRNEFTAWY True PC9_epitope_Rep5 1248.55637241748 1248.55526993586 81.945 2 0.1713289882613961 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000232388|A0A096LP01-2|SMIM26', 'ENSG00000232388|ENST00000411646|SMIM26'] 9974 8742 AYSRVQYQF True NCI_RA007_Epitope_Rep3 1160.5614577979202 1160.56036993586 41.476 2 0.1713122037388976 0.0006801564359802754 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 35630 13114 GTLSGWILSK True NCI_RA007_Epitope_Rep5 1060.59169529704 1060.5905899358602 57.121 2 0.17130861760520927 0.0006801564359802754 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 48851 7100 KESEMNVIAA True H1975_Epitope_Rep2 1090.5328600915798 1090.5317699358602 32.24 2 0.17130481648393026 0.0006801564359802754 0.9438714419765777 ['ENSG00000148411|ENST00000277554|NACC2'] 8048 10493 ATDWGDTQAY True H1975_Epitope_Rep3 1126.4567179458597 1126.4561749679299 45.424 1 0.17130438626994468 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 134512 20256 WVDPNSPVL True PC9_epitope_Rep5 1025.51819600361 1025.5170899358602 82.964 2 0.17130395824393937 0.0006801564359802754 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 2410 16084 AEQLMTLISA True H1975_Epitope_Rep2 1075.55834656343 1075.55724993586 67.074 2 0.1713027085266865 0.0006801564359802754 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 132682 10309 VYRQDCETF True PC9_epitope_Rep5 1159.4968089360298 1159.49570993586 44.641 2 0.171298052052811 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1', 'PPHLN1|p.E302K|2|0.37|ENSG00000134283|chr12:42398989-42398989|G/A|missense_variant'] 39941 12575 HQNQLLSSL True PC9_epitope_Rep6 1038.5458077337798 1038.54470993586 59.813 2 0.17129091719516895 0.0006801564359802754 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 133062 12423 VYWDSAGAAHF True NCI_RA007_Epitope_Rep5 1222.5407223533396 1222.5396299358601 54.443 2 0.1712881258124525 0.0006801564359802754 0.9438714419765777 ['ENSG00000136213|ENST00000618655|CHST12'] 31305 8966 GDYPLEAVR True NCI_RA007_Epitope_Rep2 1018.5083595959 1018.50726993586 39.494 2 0.17128596309519817 0.0006801564359802754 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 116868 13810 TYNPAFSRL True PC9_epitope_Rep2 1067.53999407735 1067.5388899358602 58.404 2 0.17128474772776645 0.0006801564359802754 0.9438714419765777 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 33025 19997 GIYTGFIKV True PC9_epitope_Rep1 996.5644179200399 996.56332993586 81.745 2 0.17128235121040342 0.0006801564359802754 0.9438714419765777 ['ENSG00000153179|ENST00000542104|RASSF3'] 94594 18446 RYKLYQEMF True PC9_epitope_Rep1 1276.6274291827597 1276.6263299358602 75.743 2 0.17127896236668924 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 94746 18804 RYLNEFEEL True PC9_epitope_Rep2 1211.5822528121498 1211.5811499358601 77.702 2 0.17127726804617574 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 118333 6185 VDEVGGEALGR True NCI_RA007_Epitope_Rep3 1100.5462016565998 1100.5451099358602 31.335 2 0.1712771379578866 0.0006801564359802754 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'CON__P02070', 'CON__Q3SX09'] 102434 12356 SPVYVGRVV True PC9_epitope_Rep5 974.5549158654999 974.55380993586 52.523 2 0.17127661651989398 0.0006801564359802754 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 108820 5416 TEQPSVSP True H1975_Epitope_Rep2 843.3974121645899 843.39686496793 25.86 1 0.17127239038452308 0.0006801564359802754 0.9438714419765777 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.T506Pfs*15|1|0.15|ENSG00000197056|chr1:35113340-35113340|A/-|frameshift_variant'] 76512 11152 NTDLGNDLY True H1975_Epitope_Rep2 1023.4509042894299 1023.4498099358599 47.933 2 0.17126583155189953 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 111036 15505 TLDPQTGLFY True H1975_Epitope_Rep1 1153.5655401188499 1153.5649749679299 64.913 1 0.17126511197237404 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 87789 16075 QVIAGFNRL True PC9_epitope_Rep5 1016.57671393924 1016.57560993586 66.822 2 0.17126393703630455 0.0006801564359802754 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 67115 11016 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.58167496793 47.335 1 0.17126015842273665 0.0006801564359802754 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 71099 8162 METDPQTISA True H1975_Epitope_Rep2 1091.48049016555 1091.4793899358601 36.345 2 0.17125952236103464 0.0006801564359802754 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 136333 15894 YHAGVSELL True PC9_epitope_Rep1 987.50254593947 987.50144993586 65.946 2 0.17124788100632024 0.0006801564359802754 0.9438714419765777 ['ENST00000498789.1_1_21:38634223-38639601:-|nuORF'] 106991 18957 SYLERHGLINF True PC9_epitope_Rep5 1347.6935345966297 1347.6924299358602 77.943 2 0.1712425417794338 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 84542 14061 QHAEPWVV True PC9_epitope_Rep5 964.4766655447999 964.47556993586 59.099 2 0.17124242924091426 0.0006801564359802754 0.9438714419765777 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7'] 115095 20583 TTVDHFWGL True PC9_epitope_Rep3 1074.51344497634 1074.5123499358601 84.438 2 0.17123612411386563 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000477950.1_1_7:881559-883270:+|nuORF', 'nc|ENSG00000164828|O94901-2|SUN1', 'nc|ENSG00000164828|O94901-7|SUN1', 'nc|ENSG00000164828|O94901-3|SUN1', 'ENST00000340926.7_1_7:872152-889323:+|nuORF', 'SUN1|p.P444Afs*17|1|0.44|ENSG00000164828|chr7:853570-853571|-/G|frameshift_variant', 'ENST00000413171.6_1_7:872152-892516:+|nuORF'] 60046 14125 LHSDLEYTV True PC9_epitope_Rep3 1075.51858992643 1075.51748993586 59.417 2 0.1712222916705737 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 37459 18776 GYADIVQLL True NCI_RA007_Epitope_Rep4 990.5385970950199 990.53750993586 81.234 2 0.17122140255126653 0.0006801564359802754 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 116267 12984 TVVERLVKV True PC9_epitope_Rep3 1041.65462990677 1041.6535299358602 54.97 2 0.17121288497540502 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000562408.1_1_16:28128533-28137161:-|nuORF'] 139853 15411 YVDPQFLTY True H1975_Epitope_Rep1 1144.54407639828 1144.5429699358601 64.549 2 0.17119914120285654 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 71140 19503 METVWTILP True H1975_Epitope_Rep3 1088.55761828744 1088.55707496793 81.733 1 0.17119572536300653 0.0006801564359802754 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 35737 6066 GTTAVFINK True NCI_RA007_Epitope_Rep3 949.5232813840499 949.52218993586 30.842 2 0.17119302881346865 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 8549 18735 ATYVFLHTV True PC9_epitope_Rep1 1049.5545815123298 1049.5534899358602 76.854 2 0.17119234616661305 0.0006801564359802754 0.9438714419765777 ['ENSG00000123353|ENST00000243045|ORMDL2'] 103776 11585 SRFPQGAQL True PC9_epitope_Rep1 1002.5246783663797 1002.52358993586 49.439 2 0.17119001474494697 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 114299 8334 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 38.731 2 0.17118710574168747 0.0006801564359802754 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 47638 18559 IYPPINVLPSL True NCI_RA007_Epitope_Rep3 1224.71181042972 1224.7107099358602 81.204 2 0.17118380901664684 0.0006801564359802754 0.9438714419765777 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 140389 12224 YYEYNHDLF True NCI_RA007_Epitope_Rep5 1262.5244035828598 1262.5233099358602 53.672 2 0.17117365347258057 0.0006801564359802754 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 73017 14320 NDEELNKLLGK True PC9_epitope_Rep3 1271.6721304457099 1271.67049490379 60.169 3 0.17117311440826624 0.0006801564359802754 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 97981 9743 SHSELIHNL True PC9_epitope_Rep3 1048.5301576696402 1048.5290699358602 42.43 2 0.17116956622053478 0.0006801564359802754 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 86688 14582 QRIDEFEAM True PC9_epitope_Rep2 1137.5124590001699 1137.51136993586 61.359 2 0.17116507422083013 0.0006801564359802754 0.9438714419765777 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 98054 10276 SHTSVGNIL True PC9_epitope_Rep2 926.48214484806 926.48104993586 44.858 2 0.17116274047403626 0.0006801564359802754 0.9438714419765777 ['ENSG00000160190|ENST00000352133|SLC37A1', 'SLC37A1|p.F372Tfs*13|1|0.28|ENSG00000160190|chr21:42563854-42563857|TGTT/-|frameshift_variant', 'nc|ENSG00000134955|Q8TED4-3|SLC37A2', 'ENST00000526405.5_1_11:124933263-124955028:+|nuORF', 'nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'ENSG00000134955|ENST00000403796|SLC37A2'] 28467 11728 FSEQVAMGY True H1975_Epitope_Rep2 1030.4429824580197 1030.44247496793 50.184 1 0.17115328537567293 0.0006801564359802754 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 127946 11673 VRPPVQVY True PC9_epitope_Rep1 956.5443511817998 956.54324993586 49.778 2 0.17115120908749507 0.0006801564359802754 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 70050 18058 LYGRNFNYL True PC9_epitope_Rep5 1158.5821932425 1158.58108993586 74.474 2 0.17114616192936297 0.0006801564359802754 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 109939 9216 THSDIQVKL True PC9_epitope_Rep3 1039.56620882519 1039.5651099358602 40.387 2 0.1711456996570554 0.0006801564359802754 0.9438714419765777 ['ENSG00000105223|ENST00000409735|PLD3', 'EGLN2-PLD3|1|fusion'] 105521 12991 SVDGVIKEV True PC9_epitope_Rep3 944.51786165044 944.51676993586 54.998 2 0.17114241085480122 0.0006801564359802754 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 75539 16348 NQLEAEIHL True PC9_epitope_Rep4 1065.54547338061 1065.54436993586 70.847 2 0.17114028261685854 0.0006801564359802754 0.9438714419765777 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'GOPC|p.R248C|1|0.66|ENSG00000047932|chr6:117573541-117573541|G/A|missense_variant', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 94963 13648 RYPTSIASL True PC9_epitope_Rep4 1006.5447451046199 1006.54364993586 60.389 2 0.17114011472285662 0.0006801564359802754 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 46242 8854 ITDSAGHILY True H1975_Epitope_Rep3 1088.55022440788 1088.5496749679298 39.063 1 0.17113577199715987 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 47678 21160 IYPSPTGVLI True PC9_epitope_Rep2 1058.60119735158 1058.60067496793 86.845 1 0.17113551243797798 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 23735 20046 EYIPKWEQF True PC9_epitope_Rep1 1238.5971746003 1238.5960699358602 81.933 2 0.17113451966281795 0.0006801564359802754 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 31089 10736 GAYKYIQEL True H1975_Epitope_Rep1 1083.56006081559 1083.5589699358602 46.258 2 0.17113423763307606 0.0006801564359802754 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 100146 20553 SLLDPVPEV True PC9_epitope_Rep4 967.52261267771 967.5220649679301 87.208 1 0.1711314692287998 0.0006801564359802754 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 103634 16438 SRDLFTYTV True PC9_epitope_Rep6 1100.55022440788 1100.54912993586 75.637 2 0.17112935281146327 0.0006801564359802754 0.9438714419765777 ['ENSG00000121281|ENST00000673801|ADCY7'] 94370 6388 RYASINTHL True NCI_RA007_Epitope_Rep4 1073.56179215109 1073.5606899358602 31.174 2 0.17111427740268523 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E'] 97246 16994 SFMPNSPRF True PC9_epitope_Rep1 1081.5015003936498 1081.50040993586 70.191 2 0.17111327070232643 0.0006801564359802754 0.9438714419765777 ['ENSG00000160326|ENST00000371899|SLC2A6', 'nc|ENSG00000160326|Q9UGQ3-2|SLC2A6', 'ENST00000485978.1_1_9:136338979-136343630:-|nuORF'] 60219 9162 LIDENDNKI True PC9_epitope_Rep5 1072.540053647 1072.53894993586 40.188 2 0.1711108067391169 0.0006801564359802754 0.9438714419765777 ['ENST00000482091.1_1_10:1089912-1094811:-|nuORF', 'nc|ENSG00000067064|Q13907|IDI1', 'ENSG00000067064|ENST00000381344|IDI1'] 89462 5719 REQEITAVQA True H1975_Epitope_Rep2 1143.58840082175 1143.58730993586 26.996 2 0.17111047575472213 0.0006801564359802754 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 132434 22722 VYNPVIYVF True PC9_epitope_Rep2 1112.5906326678798 1112.59007496793 92.896 1 0.17110919978263955 0.0006801564359802754 0.9438714419765777 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 109648 5733 THDQAVQAL True PC9_epitope_Rep2 981.4879585044899 981.48686993586 27.442 2 0.1710998658739105 0.0006801564359802754 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 64477 12001 LQVEEVHQL True PC9_epitope_Rep4 1093.57677350889 1093.57566993586 53.958 2 0.17109452404798606 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000184047|Q9NR28-2|DIABLO', 'nc|ENSG00000184047|Q9NR28-3|DIABLO', 'ENSG00000184047|ENST00000464942|DIABLO'] 135853 5577 YEQNDRLTP True H1975_Epitope_Rep3 1134.53055159246 1134.5294499358602 26.493 2 0.1710927051292794 0.0006801564359802754 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 86969 16768 QRVPLSVQL True PC9_epitope_Rep1 1038.61857875122 1038.61748993586 69.322 2 0.17108837999424686 0.0006801564359802754 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 139311 6297 YTDM[Oxidation]ESEDY True H1975_Epitope_Rep2 1167.39140075807 1167.3903099358602 29.159 2 0.17108608035485084 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 53854 13510 KYGQGFYLI True NCI_RA007_Epitope_Rep4 1087.5702315764697 1087.56912993586 59.174 2 0.17108459180205665 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF'] 138248 13301 YQTQLIQRV True PC9_epitope_Rep3 1147.6349570913499 1147.63386993586 56.196 2 0.1710845748781806 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 108936 5071 TETLVTREA True H1975_Epitope_Rep2 1018.5294889633 1018.52838993586 24.588 2 0.17107543276778528 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000211460|Q15631-2|TSN', 'ENST00000490104.5_1_2:122514991-122522940:+|nuORF', 'ENST00000467324.5_1_2:122513466-122522940:+|nuORF', 'ENSG00000211460|ENST00000389682|TSN'] 130606 17790 VVAELLRTV True PC9_epitope_Rep2 998.61243074162 998.61132993586 73.72 2 0.17107400418530075 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 43564 17104 IIEPSLRQL True PC9_epitope_Rep5 1067.6338944621898 1067.63278993586 70.812 2 0.17106931478423335 0.0006801564359802754 0.9438714419765777 ['ENSG00000221983|ENST00000442744|UBA52'] 93671 5887 RTIAPIIGR True NCI_RA007_Epitope_Rep3 995.6239984848298 995.62290993586 30.133 2 0.17106761479583224 0.0006801564359802754 0.9438714419765777 ['ENSG00000096401|ENST00000371477|CDC5L'] 97866 18451 SHLDYDITL True PC9_epitope_Rep2 1075.5185899264302 1075.51748993586 76.303 2 0.17106512107907568 0.0006801564359802754 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 26047 11034 FHDLEGNAV True PC9_epitope_Rep5 1000.4614094034799 1000.46030993586 47.432 2 0.1710578157032766 0.0006801564359802754 0.9438714419765777 ['ENSG00000099219|ENST00000339450|ERMP1'] 75763 6149 NRAPNTAEL True PC9_epitope_Rep1 984.4988575413599 984.49776993586 28.467 2 0.17104292449846678 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 115404 11737 TVEVDLFTSK True NCI_RA007_Epitope_Rep2 1137.59175486669 1137.59064993586 50.251 2 0.1710364735578359 0.0006801564359802754 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF'] 132609 20695 VYPQYVIEY True PC9_epitope_Rep3 1172.57537652656 1172.57426993586 84.877 2 0.1710326723507866 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 91657 10455 RPFQSLIHA True PC9_epitope_Rep4 1067.58761297611 1067.58650993586 47.924 2 0.1710275079090535 0.0006801564359802754 0.9438714419765777 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 62130 17930 LLPDLIQKV True PC9_epitope_Rep6 1037.6484818971699 1037.64738993586 81.593 2 0.17102706518407948 0.0006801564359802754 0.9438714419765777 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF'] 35170 15107 GSDEPAFMYY True H1975_Epitope_Rep1 1178.45902644498 1178.45847496793 63.363 1 0.17102005080172514 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 7101 6312 AQYEDIANR True PC9_epitope_Rep4 1078.5043368446197 1078.5032299358602 31.339 2 0.17101221755468013 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 14900 14234 DYKESFNTI True PC9_epitope_Rep4 1115.5135045459901 1115.5124099358602 62.658 2 0.17100143187477237 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 115540 12863 TVHDKFLAL True PC9_epitope_Rep2 1042.5811306133398 1042.58002993586 54.779 2 0.17099935945329223 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 68832 12889 LVDTFLEDVK True H1975_Epitope_Rep3 1177.6230549949698 1177.6219499358601 54.803 2 0.17099912822498928 0.0006801564359802754 0.9438714419765777 ['CON__P34955'] 31731 8585 GEIVRLTTP True NCI_RA007_Epitope_Rep3 984.56039516876 984.55928993586 40.84 2 0.1709948424961495 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000597253.5_1_19:4688763-4694742:-|nuORF'] 43617 18204 IIIPEIQKV True PC9_epitope_Rep4 1051.66413196131 1051.66302993586 78.09 2 0.17098888426339134 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 24095 17472 EYRPEFSNF True PC9_epitope_Rep1 1187.5247379360299 1187.52364993586 72.002 2 0.17098780548437562 0.0006801564359802754 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 35816 17222 GTYTGFIKV True PC9_epitope_Rep1 984.5280324113198 984.52692993586 71.063 2 0.17098675527713353 0.0006801564359802754 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 7100 6224 AQYEDIANR True PC9_epitope_Rep4 1078.5043368446197 1078.5032299358602 30.988 2 0.1709841223681452 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 116380 9042 TVYSGEEKL True PC9_epitope_Rep3 1024.5076908895599 1024.5065899358601 39.723 2 0.1709828379983304 0.0006801564359802754 0.9438714419765777 ['ENSG00000166224|ENST00000373202|SGPL1'] 110030 20548 THVFVIAEL True PC9_epitope_Rep1 1027.5702315764697 1027.56912993586 83.85 2 0.17097987653466282 0.0006801564359802754 0.9438714419765777 ['ENSG00000272047|ENST00000607778|GTF2H5'] 47694 21120 IYPTTYVQF True PC9_epitope_Rep5 1130.56481184286 1130.56370993586 86.298 2 0.17097972440802692 0.0006801564359802754 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 61276 10115 LLDTAQRALY True H1975_Epitope_Rep2 1162.6346227381798 1162.63352993586 43.904 2 0.17097303064165537 0.0006801564359802754 0.9438714419765777 ['ENSG00000249471|ENST00000336614|ZNF324B', 'ENSG00000083812|ENST00000196482|ZNF324'] 94965 15170 RYPTSIASL True PC9_epitope_Rep5 1006.5447451046199 1006.54364993586 63.36 2 0.1709630511557904 0.0006801564359802754 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 138304 19072 YRAPELLL True PC9_epitope_Rep1 973.5596668927699 973.55856993586 78.15 2 0.17096299176624266 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'CDK19|p.G207V|2|0.16|ENSG00000155111|chr6:110632056-110632056|C/A|missense_variant', 'ENSG00000155111|ENST00000368911|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'CDK8|p.H300Qfs*3|1|0.14|ENSG00000132964|chr13:26397191-26397192|AT/-|frameshift_variant', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 9409 7516 AVVIVDDR True PC9_epitope_Rep2 885.4919812557699 885.49088993586 34.278 2 0.17095308840739598 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 97714 5911 SHEEIAM[Oxidation]ATVT True NCI_RA007_Epitope_Rep2 1203.54415343171 1203.5430499358602 27.609 2 0.1709461587424098 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 47502 18218 IYLDTHFRL True PC9_epitope_Rep4 1176.6291434349198 1176.6274949037902 78.144 3 0.17094372582643003 0.0006801564359802754 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 94952 12944 RYPSNLQLF True NCI_RA007_Epitope_Rep4 1136.59784330664 1136.59674993586 56.879 2 0.1709285422261326 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 39721 9509 HPVLLTEA True PC9_epitope_Rep4 878.4861675993401 878.48561496793 44.186 1 0.17092410729647778 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'POTEF|p.E799K|1|0.23|ENSG00000196604|chr2:130075077-130075077|C/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 114281 8959 TSALPIIQK True NCI_RA007_Epitope_Rep2 969.58588164061 969.58478993586 39.468 2 0.17092174119747736 0.0006801564359802754 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 14854 8813 DYFEQYGK True H1975_Epitope_Rep1 1048.4501760134401 1048.44906993586 38.822 2 0.17091378981791105 0.0006801564359802754 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 93827 14868 RVDPNGFFLY True H1975_Epitope_Rep2 1226.60840799034 1226.60730993586 62.342 2 0.17091259773188042 0.0006801564359802754 0.9438714419765777 ['ENSG00000149782|ENST00000279230|PLCB3'] 117460 12689 VADTVARVL True PC9_epitope_Rep5 942.5498304850598 942.54872993586 53.813 2 0.17091108339660088 0.0006801564359802754 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 140282 23468 YYASFLEVL True PC9_epitope_Rep5 1103.55391280599 1103.55280993586 95.254 2 0.17090427108341538 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104131|O75822-3|EIF3J', 'ENSG00000104131|ENST00000261868|EIF3J', 'ENST00000558053.1_1_15:44846774-44849853:+|nuORF', 'ENST00000451571.1_1_9:79607732-79607996:+|nuORF'] 19475 8688 ELQEIQLK True NCI_RA007_Epitope_Rep2 999.56006081559 999.55896993586 38.442 2 0.17090301750033232 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 32007 7241 GETLLQRAA True NCI_RA007_Epitope_Rep4 957.5243440132099 957.52324993586 34.487 2 0.17090013527768297 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1'] 109657 6899 THDQAVQAL True PC9_epitope_Rep5 981.4879585044899 981.48686993586 31.507 2 0.1708965851006438 0.0006801564359802754 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 99484 10541 SLEPVAVELK True NCI_RA007_Epitope_Rep1 1083.6175756917098 1083.61646993586 44.986 2 0.17089541702967248 0.0006801564359802754 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 103474 6464 SRAPSQVSI True PC9_epitope_Rep2 943.50869394907 943.50758993586 30.277 2 0.170889061555847 0.0006801564359802754 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2', 'nc|ENSG00000166833|Q8IVL1-7|NAV2'] 133055 14269 VYVVGTAHF True PC9_epitope_Rep4 991.5127167003499 991.51160993586 62.788 2 0.1708829046360394 0.0006801564359802754 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 109568 14522 THASQIELL True PC9_epitope_Rep5 1010.5396597241798 1010.53856993586 60.857 2 0.1708713592242825 0.0006801564359802754 0.9438714419765777 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 95898 9715 SDTFINLR True H1975_Epitope_Rep1 964.4977949122 964.49668993586 42.296 2 0.17086713843668094 0.0006801564359802754 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF'] 77552 19938 NYSGAAEYLYF True PC9_epitope_Rep6 1296.56626839484 1296.56516993586 89.35 2 0.17086690539386565 0.0006801564359802754 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 76490 10749 NTDFYQTSY True H1975_Epitope_Rep3 1137.46146897313 1137.4608749679298 46.425 1 0.1708645280050295 0.0006801564359802754 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 17341 10408 EHDPVGQMV True PC9_epitope_Rep1 1010.44913046762 1010.44802993586 44.919 2 0.17086104363863935 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 119850 5807 VEVQDTPNA True H1975_Epitope_Rep3 971.45598966987 971.45544496793 27.359 1 0.17085881290538002 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000178057|Q9BU61-2|NDUFAF3', 'ENSG00000178057|ENST00000326925|NDUFAF3'] 138362 12515 YRDETLSGSEL True PC9_epitope_Rep3 1268.5884603913998 1268.5873699358601 53.163 2 0.17085704078221378 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 76341 12396 NSELSCQLY True H1975_Epitope_Rep2 1055.4593607981499 1055.45877496793 52.766 1 0.17085615489894557 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 40583 13307 HTDDPLTWDY True H1975_Epitope_Rep2 1261.52513185885 1261.52457496793 56.315 1 0.17085231965374723 0.0006801564359802754 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 17305 13074 EHDPHVLLAV True PC9_epitope_Rep2 1128.5927579262 1128.5916699358602 55.568 2 0.17084936261611483 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 7272 11235 ARPPGYEF True PC9_epitope_Rep3 935.45011644379 935.44900993586 48.224 2 0.17084920966532113 0.0006801564359802754 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 65013 9570 LSDIGSGIRY True H1975_Epitope_Rep2 1079.56112344475 1079.56002993586 41.785 2 0.17083921590899886 0.0006801564359802754 0.9438714419765777 ['ENSG00000213341|ENST00000370397|CHUK', 'CHUK|p.L222Ffs*11|1|0.17|ENSG00000213341|chr10:100219031-100219032|-/A|frameshift_variant'] 72234 11289 MRYNEKELQAL True PC9_epitope_Rep4 1393.70238502817 1393.7012899358601 51.201 2 0.17083821203798444 0.0006801564359802754 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 112652 12057 TPFEKGLHVV True PC9_epitope_Rep2 1125.61824439805 1125.6166049037902 51.691 3 0.1708363043232005 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 32586 7571 GHATPVSSL True PC9_epitope_Rep1 867.4450310633501 867.44392993586 33.939 2 0.17083379151209896 0.0006801564359802754 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 9255 4427 AVQRTLLEK True NCI_RA007_Epitope_Rep1 1056.6291434349198 1056.6280499358602 21.331 2 0.17082981868464564 0.0006801564359802754 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 130441 16818 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 69.939 2 0.17082924546421882 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 70247 17184 LYMPKLLYF True NCI_RA007_Epitope_Rep3 1186.6460393690197 1186.64494993586 75.486 2 0.1708291280258315 0.0006801564359802754 0.9438714419765777 ['ENSG00000170786|ENST00000303749|SDR16C5', 'nc|ENSG00000170786|Q8N3Y7-2|SDR16C5'] 14951 9926 DYQALRTSI True NCI_RA007_Epitope_Rep4 1065.54547338061 1065.54436993586 45.025 2 0.1708218015964689 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 273 12938 AAGSPVFL True H1975_Epitope_Rep2 760.41194002992 760.41139496793 54.88 1 0.17081810294773414 0.0006801564359802754 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 132780 20335 VYSQFITQL True PC9_epitope_Rep4 1097.5757108797297 1097.57460993586 86.363 2 0.17081751772195347 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 109679 7625 THEEAVTAL True PC9_epitope_Rep2 969.4767251144499 969.47562993586 34.701 2 0.1708043529437695 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 101638 14062 SPFHFQPSA True PC9_epitope_Rep3 1016.47158016436 1016.47048993586 59.179 2 0.17079587427514603 0.0006801564359802754 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.S1470F|1|0.13|ENSG00000102699|chr13:24434732-24434732|G/A|missense_variant', 'ENST00000446672.2_1_13:19968469-19969442:+|nuORF'] 63750 12836 LPRPQGITV True PC9_epitope_Rep2 979.5814649665099 979.58036993586 54.675 2 0.1707875504940963 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 97658 8513 SHDDGNIDL True PC9_epitope_Rep2 984.41485313388 984.41374993586 38.108 2 0.1707854360779225 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 106149 16104 SVPDPELIKTV True PC9_epitope_Rep4 1196.66525416012 1196.66414993586 69.882 2 0.17078475292305115 0.0006801564359802754 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 42956 5451 IGAEVYHNLK True NCI_RA007_Epitope_Rep3 1142.60840799034 1142.6067749037902 28.453 3 0.1707820751652051 0.0006801564359802754 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 8045 10549 ATDWGDTQAY True H1975_Epitope_Rep2 1126.4567179458597 1126.4561749679299 45.596 1 0.17078182390116406 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 133220 7289 WEDEGVRAC True H1975_Epitope_Rep3 1063.4392940599098 1063.43818993586 33.012 2 0.17077088357394687 0.0006801564359802754 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 32894 20382 GIMDRFLQV True PC9_epitope_Rep4 1077.5641006502099 1077.56300993586 86.544 2 0.17076200059658042 0.0006801564359802754 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 105442 4046 SVAPSPAVDK True NCI_RA007_Epitope_Rep4 969.51311062317 969.51200993586 21.823 2 0.17076101186075746 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 37594 10049 GYSFTTTAER True PC9_epitope_Rep1 1131.51965255559 1131.5185499358602 43.522 2 0.17075265820894203 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 74295 21802 NIIPYITNV True PC9_epitope_Rep5 1045.58079626017 1045.5796899358602 88.893 2 0.17075106456858818 0.0006801564359802754 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 134143 22237 WRFPGLLL True PC9_epitope_Rep2 1000.5858220709598 1000.58472993586 91.013 2 0.17075079591233766 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117335|P15529-2|CD46', 'nc|ENSG00000117335|P15529-6|CD46', 'nc|ENSG00000117335|P15529|CD46', 'nc|ENSG00000117335|P15529-10|CD46', 'nc|ENSG00000117335|P15529-5|CD46', 'nc|ENSG00000117335|P15529-3|CD46', 'nc|ENSG00000117335|P15529-13|CD46', 'ENSG00000117335|ENST00000367042|CD46', 'nc|ENSG00000117335|P15529-4|CD46', 'nc|ENSG00000117335|P15529-8|CD46', 'nc|ENSG00000117335|P15529-14|CD46', 'nc|ENSG00000117335|P15529-12|CD46', 'nc|ENSG00000117335|P15529-7|CD46', 'nc|ENSG00000117335|P15529-9|CD46', 'nc|ENSG00000117335|P15529-15|CD46', 'nc|ENSG00000117335|P15529-16|CD46', 'ENST00000469535.5_1_1:207925470-207933074:+|nuORF'] 16296 6156 EEIQETQTP True H1975_Epitope_Rep3 1073.48768372097 1073.4865899358601 28.691 2 0.17075008455115437 0.0006801564359802754 0.9438714419765777 ['ENSG00000155438|ENST00000285814|NIFK'] 40138 10737 HRDSGILGL True PC9_epitope_Rep6 966.5246783663799 966.52358993586 52.121 2 0.17073718822189696 0.0006801564359802754 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 316 18995 AAIEIFEKV True PC9_epitope_Rep2 1018.5698972232999 1018.56880993586 78.431 2 0.17073675465328214 0.0006801564359802754 0.9438714419765777 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 126358 11295 VPLAIVNKA True PC9_epitope_Rep2 923.58040233735 923.57930993586 48.769 2 0.17073529009583094 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 139306 8520 YTDMESEDY True H1975_Epitope_Rep2 1151.39648575807 1151.39597496793 37.727 1 0.17073005421676343 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 84995 12247 QIEEAGWSY True H1975_Epitope_Rep3 1081.4716397340098 1081.47107496793 52.284 1 0.17072597628119754 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 41037 18991 HYILHNSFF True PC9_epitope_Rep1 1176.5716285587998 1176.5705299358601 77.835 2 0.17072529278993392 0.0006801564359802754 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 41173 19470 HYTYILEVF True PC9_epitope_Rep6 1183.5913609438696 1183.59026993586 87.555 2 0.17072206179456115 0.0006801564359802754 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 25630 11334 FEVQVGPEA True H1975_Epitope_Rep3 974.4709114580198 974.4703649679301 48.706 1 0.170716940450615 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 25632 9791 FEVTGQETVA True H1975_Epitope_Rep2 1079.51350454599 1079.51297496793 42.649 1 0.17071564292159983 0.0006801564359802754 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 13122 10275 DLSLEEIQK True H1975_Epitope_Rep3 1073.5604547384098 1073.5593499358602 44.573 2 0.17071398828835935 0.0006801564359802754 0.9438714419765777 ['ENSG00000104435|ENST00000220876|STMN2', 'nc|ENSG00000104435|Q93045-2|STMN2', 'ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 140873 18141 YYTPITPHL True PC9_epitope_Rep5 1103.56514619603 1103.56404993586 74.789 2 0.17071345076420896 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 62779 16050 LMDHTIPEV True PC9_epitope_Rep3 1053.51648175145 1053.5153899358602 66.888 2 0.17070085459092144 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 62220 16503 LLPSRQFGF True PC9_epitope_Rep6 1063.5814649665099 1063.58036993586 75.909 2 0.17069760802153056 0.0006801564359802754 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 109777 11535 THISDTSVVL True PC9_epitope_Rep6 1070.56078909158 1070.5596899358602 55.457 2 0.1706911286360634 0.0006801564359802754 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 132394 19233 VYNENLVHMI True PC9_epitope_Rep1 1230.60669373818 1230.60558993586 78.779 2 0.17069081604909678 0.0006801564359802754 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 53470 15046 KVIEIVTDC True PC9_epitope_Rep5 1018.5368828428599 1018.53578993586 62.879 2 0.17068645997839038 0.0006801564359802754 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 61847 21568 LLLDVPTAAV True PC9_epitope_Rep2 1010.6011973515799 1010.60010993586 88.433 2 0.17068221848555276 0.0006801564359802754 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 119133 7706 VEILANDQGNR True PC9_epitope_Rep5 1227.6207635791898 1227.6196699358602 34.584 2 0.17068139972081622 0.0006801564359802754 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 47652 13033 IYPPKLHQF True PC9_epitope_Rep3 1141.62841515893 1141.62676490379 55.158 3 0.17068117666600746 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 35074 17319 GRHGVFLEL True PC9_epitope_Rep3 1026.5610638750998 1026.5599699358602 71.793 2 0.17066718976468323 0.0006801564359802754 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 116471 10447 TYAPAIHQI True PC9_epitope_Rep6 1012.5341804209202 1012.53308993586 50.937 2 0.17066630695156568 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant'] 81250 16338 PPPLPLPPP True PC9_epitope_Rep6 923.54803957991 923.54694993586 75.215 2 0.17065146308559126 0.0006801564359802754 0.9438714419765777 ['ENST00000606070.1_1_6:108279003-108279531:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'ENSG00000188493|ENST00000378313|ACTMAP'] 103632 17431 SRDLFTYTV True PC9_epitope_Rep4 1100.55022440788 1100.54912993586 75.042 2 0.17064933061037008 0.0006801564359802754 0.9438714419765777 ['ENSG00000121281|ENST00000673801|ADCY7'] 45115 19563 IQTAVRLLL True PC9_epitope_Rep2 1025.6597152872098 1025.65860993586 80.631 2 0.17064889771244776 0.0006801564359802754 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC4|p.R93G|1|0.26|ENSG00000278588|chr6:26123628-26123628|T/C|missense_variant', 'H2BC4|p.E94D|1|0.3|ENSG00000278588|chr6:26123623-26123623|C/A|missense_variant', 'H2BC7|p.E94D|1|0.38|ENSG00000277224|chr6:26199840-26199840|G/C|missense_variant', 'H2BC21|p.P104L|1|0.5|ENSG00000184678|chr1:149886330-149886330|G/A|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 132345 18300 VYLQNWSHVL True PC9_epitope_Rep6 1257.65060715549 1257.6495099358601 83.035 2 0.17064794561757257 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 96169 13475 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.40686993586 56.948 2 0.17063958789139322 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 14522 11743 DVAASEFFR True H1975_Epitope_Rep3 1040.4927095317598 1040.4916099358602 50.312 2 0.17063720070751548 0.0006801564359802754 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 75767 5917 NRAPNTAEL True PC9_epitope_Rep3 984.4988575413599 984.49776993586 27.821 2 0.17062516092642988 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 44551 15393 IPAYLAETL True H1975_Epitope_Rep1 989.5433481222899 989.54279496793 64.478 1 0.17062159983685768 0.0006801564359802754 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 73805 11177 NHDTGEYVL True PC9_epitope_Rep1 1046.46688870674 1046.4657899358601 47.876 2 0.17061852293575266 0.0006801564359802754 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 71153 5521 MEVEAPSKPA True H1975_Epitope_Rep3 1057.5113963710098 1057.51028993586 26.284 2 0.17061709356248836 0.0006801564359802754 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 130267 9169 VTSTFIIEK True NCI_RA007_Epitope_Rep1 1036.5804619069997 1036.57936993586 39.666 2 0.17060844805872027 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 139336 12655 YTDSSSILNY True H1975_Epitope_Rep2 1161.51898384925 1161.51847496793 53.775 1 0.17060408327879353 0.0006801564359802754 0.9438714419765777 ['ENSG00000111647|ENST00000279907|BLTP3B'] 94369 6783 RYASINTHL True NCI_RA007_Epitope_Rep2 1073.56179215109 1073.5606899358602 31.001 2 0.17060321043604976 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E'] 58391 14932 LEVNLQAMK True PC9_epitope_Rep3 1044.5637662970398 1044.5626699358602 62.571 2 0.17059804896704983 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 109671 14259 THEDGVLEL True PC9_epitope_Rep2 1011.48728979815 1011.48618993586 60.113 2 0.17059788984826446 0.0006801564359802754 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 47850 19459 IYTFPHSAF True PC9_epitope_Rep1 1081.5232813840498 1081.52218993586 79.665 2 0.17058690758813236 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 97893 15307 SHLSDQLTL True PC9_epitope_Rep3 1012.5189242796001 1012.51782993586 64.03 2 0.17056890978430891 0.0006801564359802754 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 136524 18439 YHQDAFMQL True PC9_epitope_Rep3 1151.5069796969099 1151.50588993586 76.129 2 0.17056438578785468 0.0006801564359802754 0.9438714419765777 ['ENSG00000170852|ENST00000304056|KBTBD2'] 94469 9991 RYGLVTNEI True NCI_RA007_Epitope_Rep4 1063.56620882519 1063.5651099358602 45.275 2 0.170560865710514 0.0006801564359802754 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 94961 14328 RYPTSIASL True PC9_epitope_Rep2 1006.5447451046199 1006.54364993586 60.376 2 0.17055894923889273 0.0006801564359802754 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 87524 13082 QTHSVFVNV True PC9_epitope_Rep3 1029.5243440132099 1029.5232499358601 55.344 2 0.17055722348355054 0.0006801564359802754 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 25378 10834 FEIGGTIHP True H1975_Epitope_Rep2 969.49198125577 969.49088993586 46.701 2 0.17055558079187655 0.0006801564359802754 0.9438714419765777 ['ENSG00000138678|ENST00000264409|GPAT3'] 132957 15685 VYTYIQSRF True PC9_epitope_Rep2 1175.5975089534697 1175.59640993586 65.608 2 0.17055401662675257 0.0006801564359802754 0.9438714419765777 ['DYRK4|p.R355Kfs*16|1|0.21|ENSG00000010219|chr12:4610195-4610196|-/A|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 47677 21397 IYPSPTGVLI True PC9_epitope_Rep1 1058.60119735158 1058.60067496793 87.137 1 0.17054267966680914 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 59117 8492 LGEISALTSK True H1975_Epitope_Rep1 1017.57062549929 1017.56952993586 37.594 2 0.17054256030971968 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 128354 12975 VSDPLIGGTY True H1975_Epitope_Rep3 1020.5127762699999 1020.51227496793 55.142 1 0.17053627452579076 0.0006801564359802754 0.9438714419765777 ['ENSG00000169359|ENST00000643144|SLC33A1'] 127089 11843 VQANSGAIVKL True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 50.883 2 0.1705337127360843 0.0006801564359802754 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 54053 20785 KYLTAEAFGF True PC9_epitope_Rep1 1145.5757108797297 1145.57460993586 84.779 2 0.17051397489439385 0.0006801564359802754 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 38507 4770 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 24.919 2 0.17051247175618667 0.0006801564359802754 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 9993 9367 AYSSYVHQY True PC9_epitope_Rep4 1116.48762415132 1116.48652993586 43.639 2 0.1705083261023007 0.0006801564359802754 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 106916 6966 SYISRTNQL True NCI_RA007_Epitope_Rep4 1080.5563724174801 1080.55526993586 33.42 2 0.17050773987421425 0.0006801564359802754 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 96409 7355 SEIDMSVKA True H1975_Epitope_Rep1 978.46919720586 978.46808993586 33.3 2 0.17050322172559398 0.0006801564359802754 0.9438714419765777 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 61586 19709 LLGPRLVLA True PC9_epitope_Rep1 950.6276868829399 950.62658993586 80.636 2 0.17049805762061004 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 138227 16260 YQTEIGQTL True PC9_epitope_Rep3 1051.51858992643 1051.51807496793 67.681 1 0.17048080180660258 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 24205 15733 EYVEKFYRI True PC9_epitope_Rep3 1245.6393737654498 1245.63772490379 65.677 3 0.17048068179325723 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 21273 17323 ERINNINIL True PC9_epitope_Rep1 1097.61930702721 1097.61820993586 71.447 2 0.170476164229373 0.0006801564359802754 0.9438714419765777 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 48525 11761 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52766993586 52.211 2 0.1704722163290748 0.0006801564359802754 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 107113 20638 SYMGHFDLL True PC9_epitope_Rep5 1081.49026700361 1081.4891699358602 84.437 2 0.17046660470640576 0.0006801564359802754 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 75977 14298 NRHYYSITI True PC9_epitope_Rep3 1165.58800689893 1165.5869099358601 60.084 2 0.17046467397629933 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF'] 94933 10775 RYPDSHQLF True PC9_epitope_Rep2 1161.55670677065 1161.5550749037902 46.764 3 0.17046361202368626 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 8460 7777 ATSVITIVK True NCI_RA007_Epitope_Rep3 930.57498260374 930.57388993586 37.715 2 0.1704587595281377 0.0006801564359802754 0.9438714419765777 ['ENSG00000197063|ENST00000357736|MAFG'] 95843 5204 [Acetylation]-SDKPDM[Oxidation]AEIEK True NCI_RA007_Epitope_Rep1 1319.5914978632497 1319.59038993586 24.325 2 0.1704546018214745 0.0006801564359802754 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000323496.5_1_9:131104444-131104642:+|nuORF'] 76602 8326 NTFSVVPSPK True H1975_Epitope_Rep1 1074.5709598524597 1074.5698699358602 36.959 2 0.1704515507758928 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 24335 9316 FADLSEAANR True PC9_epitope_Rep4 1092.5199869087598 1092.5188899358602 43.443 2 0.17044860403033474 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 139130 15886 YSQELSLLY True H1975_Epitope_Rep2 1114.55464108198 1114.55354993586 66.306 2 0.17044691991256664 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 67237 11962 LTDLVDDNY True H1975_Epitope_Rep3 1066.48187006454 1066.48127496793 51.17 1 0.17044552357344933 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 103055 18119 SQLEDAIRL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 74.486 2 0.17043854810356615 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 24020 21909 EYPFILDAF True PC9_epitope_Rep6 1113.5382627418498 1113.5371699358602 97.175 2 0.1704315351848308 0.0006801564359802754 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 77377 14539 NYLSHHLTI True PC9_epitope_Rep3 1096.5665431783602 1096.5654499358602 61.046 2 0.17042675460085754 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 104243 9482 SSDPASQLSY True H1975_Epitope_Rep2 1053.46146897313 1053.4608749679298 41.441 1 0.1704179717586203 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 116812 19643 TYLSIIHSL True PC9_epitope_Rep4 1045.58079626017 1045.5796899358602 83.675 2 0.17041452661419962 0.0006801564359802754 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 130607 18521 VVAELLRTV True PC9_epitope_Rep5 998.61243074162 998.61132993586 76.265 2 0.17041166146648223 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3', 'nc|ENSG00000136295|Q9C0H2-3|TTYH3'] 7206 13729 ARDFTVSAL True PC9_epitope_Rep4 978.5134449763399 978.51234993586 60.706 2 0.1704060183381032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 9646 18601 AYGHFSYEF True PC9_epitope_Rep5 1119.46616043075 1119.4650699358601 76.573 2 0.17039655920293323 0.0006801564359802754 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 75762 6051 NRAPNTAEL True PC9_epitope_Rep1 984.4988575413599 984.49776993586 28.089 2 0.17039618710826412 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 12609 7093 DLEAHIDSANK True PC9_epitope_Rep3 1211.57823006087 1211.57659490379 32.291 3 0.17039427278947097 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 75711 15507 NQVLNLIKA True PC9_epitope_Rep4 1011.6076797143498 1011.60658993586 67.572 2 0.1703875501088351 0.0006801564359802754 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 39524 19506 HPFDLGLYNEA True PC9_epitope_Rep2 1274.59315184902 1274.5920499358601 80.412 2 0.1703863650618121 0.0006801564359802754 0.9438714419765777 ['ENSG00000106399|ENST00000223129|RPA3'] 39678 10744 HPTEDLVVSA True PC9_epitope_Rep5 1066.5294889632999 1066.52838993586 46.318 2 0.1703862246496627 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 107777 19765 TAM[Oxidation]DVVYAL True PC9_epitope_Rep3 997.4790339940099 997.47792993586 81.254 2 0.17038384554744312 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 103438 7326 SRAAEKLYL True PC9_epitope_Rep4 1049.58694426977 1049.58584993586 35.507 2 0.17038284096586387 0.0006801564359802754 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 86010 14930 QPITPGPSI True PC9_epitope_Rep1 908.4967322830399 908.49618496793 62.252 1 0.1703810768366203 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 75704 10815 NQVEIKPEM True PC9_epitope_Rep1 1086.5379454720198 1086.5368499358601 46.487 2 0.17037073758444235 0.0006801564359802754 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15'] 52806 13776 KQTDVLQQL True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 58.009 2 0.17036996388171782 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 71910 11271 MPQSGTGVSV True PC9_epitope_Rep5 961.45388149489 961.45333496793 48.346 1 0.17036522819490377 0.0006801564359802754 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 115256 11037 TVDGVVFHY True H1975_Epitope_Rep1 1035.50254593947 1035.5014499358601 47.416 2 0.17036243662348324 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'VCAN-CNTNAP3B|1|fusion'] 75575 19618 NQPGVLIQV True PC9_epitope_Rep3 966.5498304850599 966.54872993586 80.699 2 0.17035756711003247 0.0006801564359802754 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 74054 9949 NHSNQFTQL True PC9_epitope_Rep1 1087.50467119779 1087.50356993586 43.131 2 0.17035271153954204 0.0006801564359802754 0.9438714419765777 ['ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENSG00000132024|ENST00000318003|CC2D1A'] 126356 11828 VPLAIVNKA True PC9_epitope_Rep1 923.58040233735 923.57930993586 50.362 2 0.17035018616545283 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 91542 18180 RPADVIFATV True PC9_epitope_Rep4 1087.60259433391 1087.6014899358602 77.997 2 0.17034947777946566 0.0006801564359802754 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 104679 7003 STAGLIIGK True NCI_RA007_Epitope_Rep3 858.51746772762 858.51636993586 34.655 2 0.1703480143877601 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA1|p.G190R|1|0.35|ENSG00000139910|chr14:26448915-26448915|C/T|missense_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 34594 9513 GQGQIYVHL True NCI_RA007_Epitope_Rep3 1013.5294293936499 1013.52832993586 44.512 2 0.1703441950147847 0.0006801564359802754 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 62769 12617 LM[Oxidation]DHTIPEV True PC9_epitope_Rep3 1069.51139675145 1069.51028993586 53.555 2 0.17034265616864125 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 140446 19773 YYFPVKNVI True PC9_epitope_Rep2 1141.6171817688898 1141.6160899358601 81.443 2 0.17033763824170337 0.0006801564359802754 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 13213 8282 DLTGVQNLR True H1975_Epitope_Rep1 1014.54580773378 1014.5447099358599 36.79 2 0.17033300603854892 0.0006801564359802754 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 14573 8820 DVFISAAER True H1975_Epitope_Rep1 1006.5083595958998 1006.50726993586 38.848 2 0.17033049373432832 0.0006801564359802754 0.9438714419765777 ['ENSG00000008018|ENST00000262193|PSMB1'] 45067 5546 IQQNTFTR True PC9_epitope_Rep1 1006.51959298594 1006.51848993586 26.162 2 0.17030650236431322 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 9257 2605 AVQRTLLEK True NCI_RA007_Epitope_Rep3 1056.6291434349198 1056.6280499358602 14.723 2 0.17030174655285404 0.0006801564359802754 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 9398 5751 AVVGVVAGGGR True NCI_RA007_Epitope_Rep4 940.5454138109598 940.54430993586 28.74 2 0.17030063485722435 0.0006801564359802754 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8'] 40448 7724 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.41397496793 34.662 1 0.17029706195137304 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 23710 19346 EYIKFLRSI True PC9_epitope_Rep3 1167.6651945904698 1167.66355490379 79.636 3 0.1702953656120735 0.0006801564359802754 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 40098 8208 HRDGALTQL True PC9_epitope_Rep1 1009.53049202281 1009.52938993586 36.404 2 0.17029290361369434 0.0006801564359802754 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 1621 7044 AEFVEVTK True NCI_RA007_Epitope_Rep2 921.4807478657299 921.4801949679301 32.023 1 0.17028574757328052 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 83768 15327 QEEDFVLQV True H1975_Epitope_Rep3 1105.5291546101298 1105.52804993586 64.366 2 0.17028504347037166 0.0006801564359802754 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 83806 11975 QEEPGQLLP True H1975_Epitope_Rep2 1009.5080252427299 1009.50692993586 51.143 2 0.17028477466268724 0.0006801564359802754 0.9438714419765777 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF', 'ENST00000566424.1_1_16:29468907-29469081:+|nuORF', 'ENST00000395400.4_1_16:29468907-29472819:+|nuORF', 'nc|ENSG00000181625|Q9BQ83-2|SLX1A', 'ENST00000561824.5_1_16:30205929-30212162:+|nuORF', 'ENSG00000181625|ENST00000330181|SLX1B', 'ENSG00000132207|ENST00000251303|SLX1A'] 132436 21991 VYNPVIYVF True PC9_epitope_Rep4 1112.5906326678798 1112.5895299358601 92.809 2 0.17028460372509102 0.0006801564359802754 0.9438714419765777 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 106823 19722 SYIALPLTL True NCI_RA007_Epitope_Rep1 989.57973363101 989.57918496793 80.902 1 0.17028372931680183 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 88483 11274 RAAEEFVNV True PC9_epitope_Rep4 1033.5192586327698 1033.5181699358602 51.141 2 0.1702807286711604 0.0006801564359802754 0.9438714419765777 ['ENSG00000132661|ENST00000254998|NXT1'] 91139 14992 RLPDIPLRQV True PC9_epitope_Rep2 1205.72444080209 1205.72278490379 62.923 3 0.17027459058406708 0.0006801564359802754 0.9438714419765777 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF'] 82139 10762 PTDGPPNSFY True H1975_Epitope_Rep3 1093.47163973401 1093.4705499358602 46.477 2 0.17027383696442003 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 91642 10963 RPFQGTMGV True PC9_epitope_Rep2 991.4909357099498 991.48982993586 47.491 2 0.17027341385839956 0.0006801564359802754 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 105718 9700 SVHKGFAFV True PC9_epitope_Rep4 990.5287011176598 990.52760993586 44.946 2 0.17027205927032357 0.0006801564359802754 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 132406 19009 VYNEQIRDLL True PC9_epitope_Rep2 1261.6666511424498 1261.66554993586 78.483 2 0.1702689071561181 0.0006801564359802754 0.9438714419765777 ['ENSG00000121621|ENST00000263181|KIF18A', 'ENST00000533466.1_1_11:28098218-28119398:-|nuORF', 'KIF18A|p.R666Kfs*29|1|0.22|ENSG00000121621|chr11:28036616-28036617|-/T|frameshift_variant'] 105341 4389 STVSADPVVK True NCI_RA007_Epitope_Rep5 1001.5393253710099 1001.53822993586 23.508 2 0.17026786203863506 0.0006801564359802754 0.9438714419765777 ['ENSG00000136051|ENST00000332180|WASHC4'] 7651 4346 ASLVGQTSPK True NCI_RA007_Epitope_Rep4 986.53965972418 986.53856993586 23.064 2 0.17026453305523934 0.0006801564359802754 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58'] 8520 9847 [Acetylation]-ATVQQLEGR True NCI_RA007_Epitope_Rep2 1042.54072266964 1042.5396299358601 42.927 2 0.1702595923676258 0.0006801564359802754 0.9438714419765777 ['ENSG00000164687|ENST00000297258|FABP5'] 47930 8573 IYYITGETK True NCI_RA007_Epitope_Rep1 1086.55972646242 1086.5586299358602 37.349 2 0.17025322941219986 0.0006801564359802754 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 139190 7231 YSTEPNNL True H1975_Epitope_Rep3 936.41887588516 936.41776993586 32.786 2 0.170252037332111 0.0006801564359802754 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 76352 9435 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.46057496793 41.259 1 0.1702449175954606 0.0006801564359802754 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 66592 7152 LSSPATLNSR True PC9_epitope_Rep3 1044.5563724174801 1044.55526993586 32.522 2 0.17024213741040028 0.0006801564359802754 0.9438714419765777 ['CON__P00761'] 70276 19281 LYPDHFHLL True PC9_epitope_Rep1 1153.59202965021 1153.5903749037902 78.967 3 0.17023995478666148 0.0006801564359802754 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 138252 10268 YQVAAAESHPL True PC9_epitope_Rep2 1184.5825871653199 1184.5814899358602 44.829 2 0.17023909190596817 0.0006801564359802754 0.9438714419765777 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 46935 16432 IVLPAGALHQV True PC9_epitope_Rep4 1116.66552894364 1116.6644299358602 71.167 2 0.1702368151743534 0.0006801564359802754 0.9438714419765777 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C'] 53645 16828 KWNPTAGVAF True PC9_epitope_Rep4 1089.56072952193 1089.5596299358601 72.706 2 0.17023556114390795 0.0006801564359802754 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 77370 18821 NYLPQISHL True PC9_epitope_Rep5 1083.57129420563 1083.57018993586 77.407 2 0.17023450607232368 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ADCK1|p.N489Gfs*12|1|0.28|ENSG00000063761|chr14:77933283-77933289|CAACTTA/-|frameshift_variant', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 14341 4218 DTDSEEEIR True PC9_epitope_Rep4 1092.45711186868 1092.45600993586 22.6 2 0.1702332231319944 0.0006801564359802754 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 27410 16092 FNDTFVHV True PC9_epitope_Rep2 977.4606811274899 977.45958993586 67.155 2 0.1702307158363761 0.0006801564359802754 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 104096 21247 SRVPLLLPL True PC9_epitope_Rep3 1006.65390163078 1006.65280993586 87.02 2 0.17022782355205882 0.0006801564359802754 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 75729 8559 NQWDGTQHGV True PC9_epitope_Rep5 1140.49483479008 1140.49372993586 37.864 2 0.17022557974818567 0.0006801564359802754 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 126829 5042 VPSYPSKSA True PC9_epitope_Rep1 934.47599683846 934.47488993586 24.251 2 0.1702254740692605 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 69899 6308 LYDATYETK True NCI_RA007_Epitope_Rep2 1102.5182555732601 1102.51714993586 29.142 2 0.1702215772541829 0.0006801564359802754 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 23622 20129 EYFKSFNF True PC9_epitope_Rep5 1080.4916469026 1080.4905499358601 82.474 2 0.17022009513881065 0.0006801564359802754 0.9438714419765777 ['ENSG00000151470|ENST00000425929|C4orf33'] 75415 15892 NQFPGFKEV True PC9_epitope_Rep3 1064.52909504048 1064.52857496793 66.277 1 0.17021422653009818 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 47419 9102 IYIKQIKTF True NCI_RA007_Epitope_Rep4 1152.6906810623198 1152.68958993586 41.849 2 0.17021350862003512 0.0006801564359802754 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 102559 11821 SQANIAQVL True NCI_RA007_Epitope_Rep5 942.5134449763399 942.51234993586 52.127 2 0.17021296129753086 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 21397 10686 ERMPEQIRL True PC9_epitope_Rep4 1170.61792712822 1170.61682993586 48.853 2 0.1702106781152831 0.0006801564359802754 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 118216 14061 VAYEEFEKV True PC9_epitope_Rep4 1112.5389910178399 1112.5378899358602 61.995 2 0.1702004231404952 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 133558 10891 WHSDDEPSL True PC9_epitope_Rep4 1084.44615326216 1084.4450499358602 49.658 2 0.17019979274692487 0.0006801564359802754 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 114169 6986 TRSTFSTNY True PC9_epitope_Rep4 1075.49343780775 1075.4923499358601 34.116 2 0.1701974608617138 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 54241 20726 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61098993586 87.887 2 0.17019558961163037 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 46615 20615 ITTDVLYTI True PC9_epitope_Rep4 1037.5644774896898 1037.5633899358602 87.449 2 0.17019409885867787 0.0006801564359802754 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 91584 14566 RPAQPTLWTA True PC9_epitope_Rep3 1139.60874234351 1139.60764993586 61.155 2 0.17019400418195907 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 7994 6552 ATDPNILGR True NCI_RA007_Epitope_Rep3 955.50869394907 955.50758993586 32.818 2 0.17018704768477344 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 140612 13800 YYNGKWEFL True NCI_RA007_Epitope_Rep3 1218.5709598524597 1218.5698699358602 61.608 2 0.17018063393417876 0.0006801564359802754 0.9438714419765777 ['ENSG00000144843|ENST00000357003|ADPRH'] 84024 5546 QENTQTPTV True H1975_Epitope_Rep3 1016.47745339044 1016.47634993586 26.378 2 0.1701759318411651 0.0006801564359802754 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 75709 16193 NQVLNLIKA True PC9_epitope_Rep2 1011.6076797143498 1011.60658993586 67.536 2 0.17016975687378488 0.0006801564359802754 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 9413 8164 AVVIVDDR True PC9_epitope_Rep5 885.4919812557699 885.49088993586 36.344 2 0.1701664407128401 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 73821 9190 NHDTGEYVL True PC9_epitope_Rep6 1046.46688870674 1046.4657899358601 45.481 2 0.17016155529306676 0.0006801564359802754 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 40446 7714 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.4134299358602 34.624 2 0.17016008910077174 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 107004 19217 SYLKEFIHI True PC9_epitope_Rep2 1148.62299542532 1148.6213549037902 79.29 3 0.17013611479813281 0.0006801564359802754 0.9438714419765777 ['ENSG00000131966|ENST00000254286|ACTR10', 'ENST00000556312.5_1_14:58666935-58675849:+|nuORF', 'ENST00000556748.5_1_14:58666901-58681958:+|nuORF'] 119104 8975 VEIEDINDHTP True H1975_Epitope_Rep3 1280.5884603913998 1280.5873699358601 39.517 2 0.17013288593241238 0.0006801564359802754 0.9438714419765777 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB4|p.A557Gfs*30|1|0.19|ENSG00000253953|chr5:141389554-141389554|C/-|frameshift_variant', 'PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 75879 18775 NRDPILVSL True PC9_epitope_Rep3 1025.58694426977 1025.58584993586 77.438 2 0.1701321989407672 0.0006801564359802754 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 137883 6532 YPM[Oxidation]AVGLNK True NCI_RA007_Epitope_Rep5 1007.5110028286299 1007.50990993586 31.789 2 0.17012752156710678 0.0006801564359802754 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 96260 9242 SEEPLLHVA True H1975_Epitope_Rep2 993.51311062317 993.51200993586 40.505 2 0.1701243887799327 0.0006801564359802754 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.N341Ifs*23|1|0.12|ENSG00000130589|chr20:63569211-63569214|TAGT/-|frameshift_variant', 'HELZ2|p.V187F|1|0.26|ENSG00000130589|chr20:63570515-63570515|C/A|missense_variant'] 63723 8223 LPQSFQVDTSK True H1975_Epitope_Rep3 1248.6350166609998 1248.6339099358602 36.612 2 0.1701185530138409 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 8870 13758 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6965849037902 57.942 3 0.17011567044630063 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 84240 8034 QEVGTSYYA True H1975_Epitope_Rep3 1016.445090633 1016.4445749679301 35.876 1 0.1701142038882202 0.0006801564359802754 0.9438714419765777 ['ENSG00000163975|ENST00000296350|MELTF', 'nc|ENSG00000163975|P08582-2|MELTF'] 113842 12661 TREEGTPLTL True PC9_epitope_Rep5 1115.5822528121498 1115.5811499358601 53.705 2 0.17011312397775585 0.0006801564359802754 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 70520 18362 LYTEKFEEF True PC9_epitope_Rep5 1204.5652057656796 1204.5641099358602 75.648 2 0.17010933229106076 0.0006801564359802754 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 43316 9821 IHEPEPHIL True PC9_epitope_Rep4 1083.57129420563 1083.57018993586 45.42 2 0.17010788455488243 0.0006801564359802754 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 132020 14673 VYGSFASKL True PC9_epitope_Rep3 970.5123823471799 970.51128993586 61.576 2 0.17010247458366834 0.0006801564359802754 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 30118 11904 FYQEHPDL True PC9_epitope_Rep1 1047.4661604307498 1047.4650699358601 50.655 2 0.17010175214831333 0.0006801564359802754 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 129438 12185 VTEKDLLLY True H1975_Epitope_Rep3 1092.60667665484 1092.60556993586 52.041 2 0.17010064621025583 0.0006801564359802754 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 102583 17757 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51234993586 73.321 2 0.17008180473633994 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 17242 19620 EHALLAYTL True PC9_epitope_Rep3 1029.5494961318898 1029.54838993586 80.705 2 0.17007816234365913 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 89628 8931 RETETVFVP True NCI_RA007_Epitope_Rep3 1076.5502244078798 1076.54912993586 42.212 2 0.17006932627456137 0.0006801564359802754 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 55051 21314 LALFPGVAL True PC9_epitope_Rep6 899.5480395799099 899.5474949679301 94.839 1 0.17006916049251253 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 33914 7888 GM[Oxidation]DVELTVEER True H1975_Epitope_Rep3 1292.59183190012 1292.59072993586 35.317 2 0.1700621742526959 0.0006801564359802754 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 8218 5687 ATIEEAYSR True NCI_RA007_Epitope_Rep5 1038.4981888350198 1038.49708993586 28.563 2 0.17006191759118652 0.0006801564359802754 0.9438714419765777 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-2|FCHO2'] 91485 4858 RNVSTGDVNVE True H1975_Epitope_Rep2 1188.5734790335998 1188.5723899358602 23.773 2 0.17006040059774408 0.0006801564359802754 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 89708 11090 REYPNLVTI True NCI_RA007_Epitope_Rep3 1103.59750895347 1103.59640993586 50.722 2 0.17005842310923103 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110'] 17720 17698 EHSLVIDTL True PC9_epitope_Rep5 1025.53932537101 1025.53822993586 73.09 2 0.1700533608367142 0.0006801564359802754 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 132891 20241 VYTSVVEEL True PC9_epitope_Rep1 1037.5280919809697 1037.52698993586 82.684 2 0.17005175061715813 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 106115 11511 SVNGVFKEV True PC9_epitope_Rep4 977.5181960036099 977.51708993586 52.038 2 0.17004224635670415 0.0006801564359802754 0.9438714419765777 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'ENST00000533440.1_1_11:62562405-62563999:-|nuORF', 'ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'ENSG00000162231|ENST00000294172|NXF1'] 17637 11286 EHQAVLQSL True PC9_epitope_Rep2 1023.53490869691 1023.53380993586 48.736 2 0.17003994614238085 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'nc|ENSG00000137171|Q9NSK0-2|KLC4'] 65024 12622 LSDISVVSNY True H1975_Epitope_Rep2 1095.54480467427 1095.54427496793 53.648 1 0.1700390373462143 0.0006801564359802754 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.S393F|1|0.37|ENSG00000137965|chr1:78662768-78662768|C/T|missense_variant', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 73522 12103 NFGIGQDIQPK True PC9_epitope_Rep6 1215.62478633047 1215.62368993586 57.89 2 0.1700385116878046 0.0006801564359802754 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 40127 13754 HRDSGILGL True PC9_epitope_Rep1 966.5246783663799 966.52358993586 57.75 2 0.17003773057041682 0.0006801564359802754 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 124679 20763 VLIPKLPQL True PC9_epitope_Rep3 1019.6743027221899 1019.67320993586 85.134 2 0.1700366682745078 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 116451 14970 TYADTLNHL True PC9_epitope_Rep1 1046.5032742154601 1046.5021699358601 62.402 2 0.17003362754975146 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.K1960N|1|0.26|ENSG00000151779|chr2:15238531-15238531|T/A|missense_variant'] 1586 10005 AEFHQIEGVVA True H1975_Epitope_Rep2 1198.59823722946 1198.5971499358602 43.474 2 0.17002931281467384 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000179115|Q9Y285-2|FARSA', 'ENSG00000179115|ENST00000314606|FARSA', 'ZNF490-FARSA|1|fusion'] 38769 12432 HHYEGAVVIL True PC9_epitope_Rep4 1136.5978433066398 1136.59674993586 55.624 2 0.17001822458907387 0.0006801564359802754 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 24113 5181 EYSKQMQRF True NCI_RA007_Epitope_Rep4 1215.57064258263 1215.56899490379 26.457 3 0.17000865945550672 0.0006801564359802754 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 103836 13509 SRIDIANTL True PC9_epitope_Rep4 1001.5505587610501 1001.54946993586 59.858 2 0.17000067034354602 0.0006801564359802754 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 43045 12526 IGGIGTVPVGR True PC9_epitope_Rep5 1024.6029286870798 1024.60182993586 53.18 2 0.16999959315390725 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 123529 21981 VIIDQLPDL True PC9_epitope_Rep3 1024.580461907 1024.57936993586 89.851 2 0.16999240135917615 0.0006801564359802754 0.9438714419765777 ['ENSG00000162337|ENST00000294304|LRP5', 'PPP6R3-LRP5|6|fusion', 'PPP6R3-LRP5|5|fusion', 'ENST00000529993.5_1_11:68154039-68171824:+|nuORF', 'nc|ENSG00000290796|A4QPB2-2|LRP5L', 'nc|ENSG00000290796|A4QPB2|LRP5L', 'ENSG00000070018|ENST00000261349|LRP6', 'LRP6|p.L805Ffs*10|2|0.2|ENSG00000070018|chr12:12159831-12159831|G/-|frameshift_variant', 'PPP6R3-LRP5|3|fusion', 'PPP6R3-LRP5|1|fusion', 'PPP6R3-LRP5|4|fusion', 'PPP6R3-LRP5|2|fusion'] 106169 11733 SVPEFPLSPPK True NCI_RA007_Epitope_Rep4 1196.6441247927198 1196.64302993586 52.1 2 0.1699897325675435 0.0006801564359802754 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 135886 11617 YESEWTNEV True H1975_Epitope_Rep3 1155.47203365683 1155.47147496793 49.816 1 0.16998931169294293 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.K581N|1|0.19|ENSG00000151348|chr11:44232433-44232433|G/T|missense_variant'] 89220 8124 REIQEAIAVA True H1975_Epitope_Rep1 1098.6033226098998 1098.6022299358601 36.191 2 0.16998806883185674 0.0006801564359802754 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 113676 16148 TRDELEWKL True PC9_epitope_Rep5 1188.6138872935999 1188.61278993586 67.1 2 0.1699855229111662 0.0006801564359802754 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 2641 8279 AESSFSQEV True H1975_Epitope_Rep2 982.4243551884199 982.42324993586 36.796 2 0.16997442859934947 0.0006801564359802754 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR'] 96083 12097 SEDIRIQLV True H1975_Epitope_Rep2 1071.5924235730301 1071.5913299358601 51.613 2 0.16997426540601698 0.0006801564359802754 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 109751 17996 THIDTVINAL True PC9_epitope_Rep2 1095.59242357303 1095.5913299358601 74.525 2 0.16997052675396043 0.0006801564359802754 0.9438714419765777 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF'] 35628 12642 GTLSGWILSK True NCI_RA007_Epitope_Rep3 1060.59169529704 1060.5905899358602 56.97 2 0.16996676147834436 0.0006801564359802754 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 116058 5159 TVRSSTSSI True PC9_epitope_Rep4 936.48762415132 936.48652993586 26.529 2 0.1699650527408368 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 8858 12713 AVFPSIVGRPR True PC9_epitope_Rep2 1197.69822605425 1197.6965849037902 54.205 3 0.16995889175808862 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 116626 16079 TYHPGVPVF True PC9_epitope_Rep2 1015.5127167003499 1015.51160993586 67.105 2 0.1699466560283785 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1', 'ENST00000533739.1_1_11:89951170-89956122:-|nuORF', 'ENST00000533724.5_1_11:89947115-89956122:-|nuORF', 'ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 140690 8317 YYQDTPKQI True PC9_epitope_Rep2 1154.5607890915799 1154.5596899358602 37.356 2 0.1699398617494723 0.0006801564359802754 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 14978 21021 DYSSILQKF True PC9_epitope_Rep1 1099.55497543515 1099.5538699358601 85.685 2 0.16992622889608597 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 110080 20992 TIAEGLTLAQV True PC9_epitope_Rep1 1114.62338934814 1114.6228749679299 85.571 1 0.16992296338867835 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 139351 8724 YTDSYTDTY True H1975_Epitope_Rep2 1127.42950013851 1127.42897496793 38.518 1 0.169916729294745 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 2389 11726 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.50618993586 50.177 2 0.16991601005913057 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 109359 9656 TGISDVFAK True H1975_Epitope_Rep1 936.4916469026 936.49054993586 42.071 2 0.16991179677295515 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 106526 13635 SVVSDILFK True NCI_RA007_Epitope_Rep3 1006.5698972233 1006.56880993586 60.934 2 0.16990554016208886 0.0006801564359802754 0.9438714419765777 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-3|TBC1D2B', 'ENST00000472786.1_1_15:78295640-78309087:-|nuORF'] 77361 16391 NYLNHWNHF True PC9_epitope_Rep1 1243.55229009655 1243.55065490379 67.87 3 0.16990438341205627 0.0006801564359802754 0.9438714419765777 ['ENSG00000167363|ENST00000300784|FN3K'] 7121 5388 AQYEEIAQR True NCI_RA007_Epitope_Rep5 1106.5356369728997 1106.53452993586 27.413 2 0.16990251735920403 0.0006801564359802754 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6C|p.R349Q|1|0.16|ENSG00000170465|chr12:52471163-52471163|C/T|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 96274 5422 SEESARLVAA True H1975_Epitope_Rep2 1031.5247379360299 1031.52364993586 25.883 2 0.16990211849035983 0.0006801564359802754 0.9438714419765777 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B'] 21607 16985 ERSPLDQVL True PC9_epitope_Rep2 1055.56112344475 1055.56002993586 70.58 2 0.16989558678128414 0.0006801564359802754 0.9438714419765777 ['ENSG00000168994|ENST00000380283|PXDC1'] 86732 8416 QRLAEPSQL True PC9_epitope_Rep4 1040.56145779792 1040.56036993586 39.836 2 0.16989318694647032 0.0006801564359802754 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 48563 8875 KEHEVTIFV True NCI_RA007_Epitope_Rep4 1100.5866099165999 1100.58550993586 40.963 2 0.16988899969790064 0.0006801564359802754 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 66601 5799 LSSPATLNSR True PC9_epitope_Rep6 1044.5563724174801 1044.55526993586 30.502 2 0.1698842263970158 0.0006801564359802754 0.9438714419765777 ['CON__P00761'] 104483 3308 SSNLPVNNK True NCI_RA007_Epitope_Rep4 971.50360856863 971.50250993586 18.45 2 0.1698839085842424 0.0006801564359802754 0.9438714419765777 ['ENSG00000135974|ENST00000258457|C2orf49'] 86849 12439 QRQDIAFAY True PC9_epitope_Rep6 1110.5458077337798 1110.54470993586 59.274 2 0.1698808773741205 0.0006801564359802754 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 43883 15620 ILDEVIM[Oxidation]GY True H1975_Epitope_Rep2 1067.5208988059899 1067.5198099358602 65.238 2 0.16988048973795977 0.0006801564359802754 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 99627 19503 SLFRVITEV True PC9_epitope_Rep4 1062.60734536118 1062.6062499358602 83.137 2 0.16987469744086553 0.0006801564359802754 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 14379 8766 DTENQTLNY True H1975_Epitope_Rep3 1096.46728262956 1096.46618993586 38.725 2 0.16986847306315353 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217'] 89446 12113 REQDLILAV True NCI_RA007_Epitope_Rep5 1055.5975089534697 1055.59640993586 53.248 2 0.16986705224028534 0.0006801564359802754 0.9438714419765777 ['ENSG00000177303|ENST00000321617|CASKIN2'] 124893 19621 VLLPEGGITAI True PC9_epitope_Rep6 1081.63831113629 1081.63720993586 88.131 2 0.16986573946384056 0.0006801564359802754 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 134355 13065 WSDQNIEYEY True H1975_Epitope_Rep2 1345.54626122625 1345.54516993586 55.377 2 0.16986198368568195 0.0006801564359802754 0.9438714419765777 ['ENSG00000196757|ENST00000254321|ZNF700'] 135768 5882 YENEVALR True NCI_RA007_Epitope_Rep5 992.4927095317598 992.49160993586 29.312 2 0.1698594033589377 0.0006801564359802754 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 113418 7493 TQLQTTQSV True PC9_epitope_Rep4 1004.5138388991599 1004.51274993586 36.185 2 0.16985649898091873 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.E636Q|2|0.14|ENSG00000143569|chr1:154254887-154254887|G/C|missense_variant'] 34494 8109 GQDVGRYQV True PC9_epitope_Rep1 1020.49885754136 1020.49776993586 36.018 2 0.16984965665628757 0.0006801564359802754 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 127063 18033 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 74.379 2 0.169843561878625 0.0006801564359802754 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 89147 13475 REGDLLFTVA True NCI_RA007_Epitope_Rep5 1119.5924235730301 1119.5913299358601 58.516 2 0.16983708284370666 0.0006801564359802754 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 71447 22166 MISLEIPQV True PC9_epitope_Rep5 1028.55761828744 1028.55652993586 90.299 2 0.16982890394523495 0.0006801564359802754 0.9438714419765777 ['ENSG00000111231|ENST00000228827|GPN3', 'nc|ENSG00000111231|Q9UHW5-2|GPN3', 'nc|ENSG00000111231|Q9UHW5-3|GPN3'] 119254 15055 VELDNMPLR True PC9_epitope_Rep1 1085.5539298893298 1085.55282993586 62.726 2 0.16982808343776262 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 73254 7231 NEIDNDGRIP True H1975_Epitope_Rep2 1141.53636524889 1141.53526993586 32.749 2 0.16982513494814094 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 1065 19769 AEALPLPLLP True H1975_Epitope_Rep2 1032.6219327961599 1032.62082993586 82.016 2 0.16982389687276475 0.0006801564359802754 0.9438714419765777 ['ENST00000256190.12_1_11:10315695-10315752:-|nuORF'] 114468 5186 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59746993586 25.02 2 0.1698230419191051 0.0006801564359802754 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 139350 8722 YTDSYTDTY True H1975_Epitope_Rep2 1127.42950013851 1127.4284099358601 38.51 2 0.16981417800520923 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 103000 16238 SQISDTSVVL True PC9_epitope_Rep6 1047.5448046742702 1047.54370993586 74.823 2 0.1698059834131963 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 17806 8278 EHYNQPTSL True PC9_epitope_Rep5 1087.49343780775 1087.4923499358601 36.78 2 0.16979742663708447 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 104097 20205 SRVPLLLPL True PC9_epitope_Rep4 1006.65390163078 1006.65280993586 85.856 2 0.1697969008178511 0.0006801564359802754 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 47679 21165 IYPSPTGVLI True PC9_epitope_Rep2 1058.60119735158 1058.60010993586 86.866 2 0.16979605944405102 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 94922 7517 RYPDSHQLF True NCI_RA007_Epitope_Rep3 1161.55670677065 1161.55560993586 36.692 2 0.16979551874300797 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 34944 8617 GQWKKGFVL True NCI_RA007_Epitope_Rep5 1061.6022004110898 1061.6011099358602 39.821 2 0.1697814394387668 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 105627 10015 SVFEDPVISK True NCI_RA007_Epitope_Rep4 1119.58119018299 1119.58008993586 45.367 2 0.169774371901144 0.0006801564359802754 0.9438714419765777 ['ENSG00000125445|ENST00000245539|MRPS7'] 15852 6829 EDLQELNDR True NCI_RA007_Epitope_Rep2 1130.5203808315798 1130.5192899358601 31.179 2 0.16977036223381695 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'ENST00000470199.2_1_1:156084502-156100509:+|nuORF'] 128338 9086 VSDLLHQY True H1975_Epitope_Rep3 973.4868958753302 973.48578993586 39.937 2 0.1697700118509374 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'PSMB8|p.D263Y|1|0.52|ENSG00000204264|chr6:32841003-32841003|C/A|missense_variant'] 77374 12273 NYLSHHLTI True PC9_epitope_Rep2 1096.5665431783602 1096.5654499358602 52.517 2 0.16976830857807096 0.0006801564359802754 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 113411 19516 TQLNMFQTL True PC9_epitope_Rep6 1094.54303085246 1094.54192993586 87.732 2 0.16976285438758673 0.0006801564359802754 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 129303 10958 VTDSGPTFNY True H1975_Epitope_Rep2 1099.4822044177101 1099.48110993586 47.181 2 0.16976220957917226 0.0006801564359802754 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 17240 19630 EHALLAYTL True PC9_epitope_Rep1 1029.5494961318898 1029.54838993586 80.332 2 0.16975830275450604 0.0006801564359802754 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 113657 16149 TRDELEWKL True PC9_epitope_Rep1 1188.6138872935999 1188.61278993586 66.931 2 0.16975709934533367 0.0006801564359802754 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 36024 13861 GVDLTGPQLY True H1975_Epitope_Rep2 1061.53932537101 1061.53822993586 58.461 2 0.1697529001432013 0.0006801564359802754 0.9438714419765777 ['ENSG00000205220|ENST00000358514|PSMB10'] 52460 10164 KPIEELQNV True PC9_epitope_Rep4 1068.58152453616 1068.5804299358601 46.772 2 0.1697501237587939 0.0006801564359802754 0.9438714419765777 ['ENSG00000166920|ENST00000396650|C15orf48'] 84646 13211 QHEEFVTSL True PC9_epitope_Rep4 1088.51383889916 1088.51274993586 58.714 2 0.1697482534794377 0.0006801564359802754 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 3640 8653 AGQAVDDFIEK True H1975_Epitope_Rep1 1191.57716743171 1191.57606993586 38.213 2 0.1697434203819214 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000142657|P52209-2|PGD', 'ENSG00000142657|ENST00000270776|PGD'] 25892 14458 FGIDRPAEL True PC9_epitope_Rep6 1016.5290950404799 1016.52798993586 67.5 2 0.16974115616191351 0.0006801564359802754 0.9438714419765777 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 139864 20707 YVDPVITSI True PC9_epitope_Rep3 1005.53826274185 1005.53716993586 84.925 2 0.16974090210552226 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 138814 7805 YSDKEFAGSY True H1975_Epitope_Rep2 1165.49276910141 1165.49166993586 34.97 2 0.1697341606013665 0.0006801564359802754 0.9438714419765777 ['ENSG00000109436|ENST00000442267|TBC1D9', 'ENST00000514787.1_1_4:141591792-141598206:-|nuORF'] 109361 14688 TGISDVFAK True PC9_epitope_Rep1 936.4916469026 936.49054993586 61.319 2 0.16973173423507362 0.0006801564359802754 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 39925 12126 HQLSQLQAL True PC9_epitope_Rep4 1036.5665431783598 1036.5654499358602 54.453 2 0.16973110216881382 0.0006801564359802754 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 11627 5765 DHASIQM[Oxidation]NV True PC9_epitope_Rep2 1029.45494450449 1029.45384993586 27.568 2 0.1697289900450069 0.0006801564359802754 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 22201 5923 ETDENFHNY True H1975_Epitope_Rep3 1167.44688153815 1167.4457899358601 27.791 2 0.1697273364389898 0.0006801564359802754 0.9438714419765777 ['ENSG00000146350|ENST00000398212|TBC1D32', 'nc|ENSG00000146350|Q96NH3-4|TBC1D32', 'nc|ENSG00000146350|Q96NH3-5|TBC1D32'] 63960 10424 LQAEIDNIK True PC9_epitope_Rep1 1042.56587447202 1042.56476993586 44.982 2 0.16970824554029448 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 77018 19381 NVVDVFHAV True PC9_epitope_Rep5 998.51853035678 998.51742993586 79.595 2 0.16968574526422084 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 70306 20500 LYPEVFEKF True PC9_epitope_Rep3 1170.5961119711399 1170.5950099358602 84.114 2 0.16966963686772651 0.0006801564359802754 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 88923 6133 REDEISPPPP True H1975_Epitope_Rep1 1135.5509526838698 1135.54984993586 28.66 2 0.16966148891558405 0.0006801564359802754 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 64116 9169 LQEEMLQR True PC9_epitope_Rep1 1045.52262976105 1045.5215299358601 40.118 2 0.16965535523320754 0.0006801564359802754 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'VIM|p.E187G|1|0.33|ENSG00000026025|chr10:17229982-17229982|A/G|missense_variant'] 82142 7522 PTDPKVVVY True H1975_Epitope_Rep2 1016.5542471591598 1016.55314993586 33.884 2 0.16965516408499193 0.0006801564359802754 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 21686 17286 ERYFISHVL True PC9_epitope_Rep1 1162.61349337078 1162.6123899358602 71.308 2 0.1696407431134178 0.0006801564359802754 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 9897 22903 AYPEYLITF True PC9_epitope_Rep1 1115.55391280599 1115.55280993586 92.894 2 0.16963906199989168 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 36606 22261 GVLKVFLENV True PC9_epitope_Rep3 1116.6542955536 1116.6531899358602 90.913 2 0.1696307459690003 0.0006801564359802754 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 75725 8653 NQWDGTQHGV True PC9_epitope_Rep3 1140.49483479008 1140.49372993586 38.235 2 0.1696274062682983 0.0006801564359802754 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 76079 15374 NRMDYYNAL True PC9_epitope_Rep1 1158.51279335334 1158.5116899358602 63.954 2 0.16962275063506205 0.0006801564359802754 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 33224 13588 GLADNTVIAKV True PC9_epitope_Rep6 1099.62372370131 1099.62262993586 64.012 2 0.16962201650129324 0.0006801564359802754 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 103799 15140 SRGDFVVEY True PC9_epitope_Rep3 1070.50327421546 1070.5021699358601 63.374 2 0.16961829671896905 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 137126 8801 YLDESKQLY True H1975_Epitope_Rep3 1157.56045473841 1157.5593499358602 38.859 2 0.1696168029009501 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-7|PRXL2B'] 62772 12425 LM[Oxidation]DHTIPEV True PC9_epitope_Rep5 1069.51139675145 1069.51028993586 52.792 2 0.16961526598977505 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 53888 15482 KYIEGVSDF True PC9_epitope_Rep1 1056.51277627 1056.51166993586 64.372 2 0.16961469130496423 0.0006801564359802754 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 26505 17914 FISPFGHGL True PC9_epitope_Rep6 973.5021520166499 973.50104993586 81.531 2 0.16961373201406774 0.0006801564359802754 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000577440.5_1_17:56598198-56609324:-|nuORF', 'ENST00000584488.5_1_17:56598198-56606616:-|nuORF', 'ENSG00000184702|ENST00000455784|SEPTIN5', 'nc|ENSG00000284874|Q99719-2|SEPTIN5'] 70918 14050 M[Oxidation]ELITPISA True H1975_Epitope_Rep2 989.5103341222899 989.50922993586 59.195 2 0.16960757792260078 0.0006801564359802754 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 8876 11564 AVFPSIVGRPR True PC9_epitope_Rep6 1197.69822605425 1197.6965849037902 55.588 3 0.16960734120340767 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 110408 17705 TIMPKDIQL True PC9_epitope_Rep2 1057.58416738845 1057.58306993586 73.385 2 0.16959827327393576 0.0006801564359802754 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'H3-5|p.R128H|1|0.5|ENSG00000188375|chr12:31791784-31791784|C/T|missense_variant', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 75854 9697 NRDLSTPGL True PC9_epitope_Rep2 971.5036085686299 971.50250993586 42.639 2 0.16959719736074347 0.0006801564359802754 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 113619 14631 TRDAGYGGLSL True PC9_epitope_Rep2 1108.5512870370399 1108.55018993586 61.545 2 0.16959247659073706 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 128197 11203 VRTPYTMSY True PC9_epitope_Rep6 1116.52738078832 1116.5262899358602 54.069 2 0.16958887843518758 0.0006801564359802754 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 27064 22023 FLPDPSALQNL True PC9_epitope_Rep5 1213.6342883850098 1213.6331899358602 89.738 2 0.1695824863312639 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 36658 14897 GVLQLGNIVFK True NCI_RA007_Epitope_Rep3 1186.70739375562 1186.70628993586 66.028 2 0.1695667505164188 0.0006801564359802754 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 41146 19180 HYQDVSCLQF True PC9_epitope_Rep5 1238.53900810118 1238.5379099358602 78.813 2 0.1695633913865184 0.0006801564359802754 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 133235 7186 WEEEAGRYAA True H1975_Epitope_Rep3 1180.5149015283198 1180.51380993586 32.616 2 0.1695618018607258 0.0006801564359802754 0.9438714419765777 ['ENST00000529712.5_1_11:47736424-47736610:-|nuORF'] 81012 7377 PNSGSVSAY True PC9_epitope_Rep5 880.3926611373199 880.3921149679301 33.334 1 0.1695574315454445 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 61354 4087 LLEGEESR True PC9_epitope_Rep4 931.4610750503099 931.45996993586 22.015 2 0.16955506553465238 0.0006801564359802754 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 127525 14135 VQVGETFKV True PC9_epitope_Rep1 1005.5494961318899 1005.54838993586 59.196 2 0.1695523048603276 0.0006801564359802754 0.9438714419765777 ['ENSG00000141646|ENST00000342988|SMAD4', 'SMAD4|p.D415Efs*20|1|0.15|ENSG00000141646|chr18:51067121-51067124|AGAC/-|frameshift_variant'] 67607 11698 LTEVDNYHFY True H1975_Epitope_Rep3 1299.5771674317102 1299.57657496793 50.136 1 0.16954723140815176 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 72173 15380 MRMLAEDEL True PC9_epitope_Rep4 1106.51001647202 1106.5089099358602 67.091 2 0.16953858717940704 0.0006801564359802754 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 132442 16446 VYNPVRAEW True PC9_epitope_Rep5 1132.5665431783598 1132.5654499358602 68.259 2 0.16952877305762887 0.0006801564359802754 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6'] 35433 8228 GTDTGVVQY True H1975_Epitope_Rep3 938.4345259493 938.43342993586 36.632 2 0.16952327280533763 0.0006801564359802754 0.9438714419765777 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF'] 24456 8077 FAHTNVESL True NCI_RA007_Epitope_Rep2 1016.4927095317599 1016.49160993586 36.051 2 0.1695215834230707 0.0006801564359802754 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 49020 11435 KFIDTTSKF True PC9_epitope_Rep1 1085.57571087973 1085.57460993586 48.862 2 0.16951968605245932 0.0006801564359802754 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 17274 19685 EHDAFIFAL True PC9_epitope_Rep6 1061.51819600361 1061.5170899358602 88.377 2 0.16951752743850018 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160'] 128353 13071 VSDPLIGGTY True H1975_Epitope_Rep2 1020.5127762699999 1020.51166993586 55.4 2 0.16951277454071081 0.0006801564359802754 0.9438714419765777 ['ENSG00000169359|ENST00000643144|SLC33A1'] 115277 13438 TVDNARIVL True PC9_epitope_Rep3 999.5712942056299 999.57018993586 56.736 2 0.1695069764091801 0.0006801564359802754 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 74675 22612 NLIDLDDLYV True PC9_epitope_Rep4 1191.6023195503901 1191.6012299358601 95.208 2 0.16950084074605964 0.0006801564359802754 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 39672 10163 HPTEDLVVSA True PC9_epitope_Rep2 1066.5294889632999 1066.52838993586 44.429 2 0.16949333689882154 0.0006801564359802754 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 97090 5688 SEYWDRETRSA True H1975_Epitope_Rep2 1398.61640647474 1398.61477490379 26.877 3 0.16949203819013967 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 123295 16149 VHSEQVFAL True PC9_epitope_Rep5 1028.5290950404797 1028.5279899358602 67.104 2 0.16949069058785168 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 71292 14713 MHAETAFESL True PC9_epitope_Rep4 1134.5015599633 1134.50046993586 64.527 2 0.16948805405818756 0.0006801564359802754 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 120094 19624 VFHPSQDLVF True PC9_epitope_Rep5 1187.5975089534697 1187.59640993586 80.536 2 0.16948606443624958 0.0006801564359802754 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 92127 11760 RQADFVQVL True NCI_RA007_Epitope_Rep2 1074.5821932425 1074.58108993586 50.342 2 0.16948428194381204 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 110375 19085 TILPKVMQV True PC9_epitope_Rep1 1027.6099882134697 1027.6088899358601 78.201 2 0.16947715699960011 0.0006801564359802754 0.9438714419765777 ['ENSG00000140259|ENST00000267812|MFAP1', 'ENST00000484386.1_1_15:44097294-44102132:-|nuORF'] 92233 9100 RQIPLQSL True NCI_RA007_Epitope_Rep4 953.56581490237 953.56470993586 41.841 2 0.16947611508262356 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1', 'ENST00000467423.1_1_1:19566287-19566919:-|nuORF'] 23669 20657 EYGPVYSTW True PC9_epitope_Rep5 1100.48147614172 1100.48097496793 84.51 1 0.16946556342056363 0.0006801564359802754 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30'] 135564 6263 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52897496793 29.103 1 0.16945958265758143 0.0006801564359802754 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 89778 16719 RFEEAHFTF True PC9_epitope_Rep1 1182.5458077337796 1182.54415490379 69.138 3 0.16944740573655648 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 95791 8724 SDDLPLNVSR True H1975_Epitope_Rep1 1114.5618517207402 1114.56074993586 38.485 2 0.16944577816007253 0.0006801564359802754 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 44846 19246 IPYHIVNIV True PC9_epitope_Rep2 1066.6175161220601 1066.61640993586 79.403 2 0.169442560664895 0.0006801564359802754 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 64789 9887 LRVDPVNFK True PC9_epitope_Rep6 1086.61857875122 1086.61748993586 48.531 2 0.1694392529127695 0.0006801564359802754 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'ENSG00000130656|ENST00000252951|HBZ', 'CON__P01966'] 106152 16364 SVPDPELIKTV True PC9_epitope_Rep4 1196.66525416012 1196.66414993586 70.906 2 0.1694308441102701 0.0006801564359802754 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 67245 17351 LTDLVDDNYFY True H1975_Epitope_Rep2 1376.6136125100802 1376.61250993586 72.035 2 0.1694283866891395 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 47269 23955 IYEPNFIFF True PC9_epitope_Rep3 1188.5855472874398 1188.5844499358602 97.428 2 0.16942478579149178 0.0006801564359802754 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 95055 9225 RYSEYAEEF True NCI_RA007_Epitope_Rep5 1192.5036681382796 1192.50256993586 42.134 2 0.1694230599094319 0.0006801564359802754 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 75673 16345 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53911496793 68.116 1 0.16941893499516314 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 35072 16963 GRHGVFLEL True PC9_epitope_Rep1 1026.5610638750998 1026.5599699358602 70.071 2 0.169415314468127 0.0006801564359802754 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 72300 5074 MSEEHTAVY True H1975_Epitope_Rep2 1065.44371073401 1065.4426099358602 24.599 2 0.16940495886640786 0.0006801564359802754 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 96452 10823 SEIPKLPAV True NCI_RA007_Epitope_Rep3 952.5593325395998 952.55822993586 49.622 2 0.16940112805375498 0.0006801564359802754 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA', 'ENST00000598044.1_1_19:50861812-50862477:-|nuORF'] 84069 9036 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 39.746 2 0.16939915667929692 0.0006801564359802754 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 75691 14746 NQTPVTLQV True PC9_epitope_Rep6 998.5396597241801 998.53856993586 68.668 2 0.1693982150704785 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 2622 9131 AESPGSPLV True H1975_Epitope_Rep2 855.43379767331 855.43324496793 40.074 1 0.16939702288733177 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000172059|O14901-2|KLF11', 'ENSG00000172059|ENST00000305883|KLF11'] 60635 7330 LITEDVQGK True PC9_epitope_Rep3 1001.5393253710098 1001.53822993586 33.204 2 0.16939078290911067 0.0006801564359802754 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF'] 2805 5900 AEVEPTPEA True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 27.681 1 0.1693861905188472 0.0006801564359802754 0.9438714419765777 ['ENSG00000186834|ENST00000332499|HEXIM1'] 24746 17929 FAYDGKDYL True PC9_epitope_Rep3 1090.4971262058598 1090.4960299358602 74.168 2 0.1693834624712119 0.0006801564359802754 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 17393 14125 EHFNGVAEL True PC9_epitope_Rep1 1014.4770594676198 1014.47596993586 59.157 2 0.16937624020871075 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5A|p.E251Q|1|0.1|ENSG00000066027|chr1:212347393-212347393|G/C|missense_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E'] 137981 11242 YQAEHLLQT True PC9_epitope_Rep2 1101.5454733806098 1101.54436993586 48.568 2 0.16937302353748748 0.0006801564359802754 0.9438714419765777 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 94847 9530 RYMPQNPHI True PC9_epitope_Rep3 1154.5654976325397 1154.5638449037901 41.604 3 0.16937293409242962 0.0006801564359802754 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 8592 19889 AVAELNYGL True PC9_epitope_Rep5 948.4916469026 948.49054993586 81.555 2 0.16936884186926165 0.0006801564359802754 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 88334 20280 QYLQDAYSF True PC9_epitope_Rep2 1133.5029398622898 1133.5023749679299 83.428 1 0.16936815236857625 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 105767 6568 SVIDTSTIVRK True NCI_RA007_Epitope_Rep3 1217.69795127073 1217.69629490379 32.887 3 0.16936454642452234 0.0006801564359802754 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 41158 18612 HYSENMFSF True PC9_epitope_Rep4 1160.4596951513201 1160.4585899358601 79.667 2 0.16936018256240948 0.0006801564359802754 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 48932 8990 KEYDGVVVV True H1975_Epitope_Rep1 1006.5335117145797 1006.53240993586 39.486 2 0.16935766661131837 0.0006801564359802754 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 101518 8407 SPAGPVLSIR True H1975_Epitope_Rep1 995.57637958607 995.57528993586 37.266 2 0.16935314870911394 0.0006801564359802754 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 117457 11303 VADTVARVL True PC9_epitope_Rep4 942.5498304850598 942.54872993586 51.253 2 0.16934759049029893 0.0006801564359802754 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 100437 12831 SLPEELQKC True PC9_epitope_Rep1 1045.51139637101 1045.51028993586 54.229 2 0.16934335341196577 0.0006801564359802754 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 61405 19070 LLEPFVHQV True PC9_epitope_Rep3 1080.59678067748 1080.59568993586 78.576 2 0.16934250303275736 0.0006801564359802754 0.9438714419765777 ['ENSG00000068745|ENST00000328631|IP6K2', 'nc|ENSG00000068745|Q9UHH9-3|IP6K2', 'nc|ENSG00000068745|Q9UHH9-6|IP6K2', 'nc|ENSG00000068745|Q9UHH9-2|IP6K2', 'nc|ENSG00000068745|Q9UHH9-4|IP6K2', 'nc|ENSG00000068745|Q9UHH9-5|IP6K2'] 88481 11844 RAAEEFVNV True PC9_epitope_Rep2 1033.5192586327698 1033.5181699358602 50.886 2 0.1693312625324833 0.0006801564359802754 0.9438714419765777 ['ENSG00000132661|ENST00000254998|NXT1'] 53803 13206 KYFLWEEKF True NCI_RA007_Epitope_Rep4 1288.6492101731599 1288.64810993586 57.92 2 0.1693284342722323 0.0006801564359802754 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 104008 7908 SRSDSNFQV True PC9_epitope_Rep1 1038.47303671634 1038.47192993586 35.244 2 0.16932596172292702 0.0006801564359802754 0.9438714419765777 ['ENST00000505131.1_1_4:48384636-48389420:+|nuORF', 'ENSG00000109171|ENST00000264313|SLAIN2'] 21781 13100 ESDFSNPLY True H1975_Epitope_Rep3 1070.4556553167 1070.45454993586 55.634 2 0.1693233730809831 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 17329 14212 EHDPSSIYL True PC9_epitope_Rep3 1059.48728979815 1059.48618993586 59.753 2 0.16932265101619978 0.0006801564359802754 0.9438714419765777 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 136432 15206 YHGAEIVSL True PC9_epitope_Rep5 987.50254593947 987.50144993586 63.499 2 0.16931929260900294 0.0006801564359802754 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 84049 8796 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57746993586 38.759 2 0.16931809695615985 0.0006801564359802754 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 75916 9759 NRDTQETLL True PC9_epitope_Rep1 1088.5462016566 1088.5451099358602 42.397 2 0.16931103640110387 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000197905|Q15561-2|TEAD4', 'nc|ENSG00000187079|P28347-2|TEAD1', 'nc|ENSG00000197905|Q15561-3|TEAD4', 'ENSG00000187079|ENST00000527636|TEAD1', 'ENSG00000197905|ENST00000359864|TEAD4'] 103405 20821 SQYEEQFVTL True PC9_epitope_Rep1 1242.5768330785397 1242.5757299358602 84.916 2 0.16930889131770158 0.0006801564359802754 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 22446 3762 ETGEHLVHVK True NCI_RA007_Epitope_Rep2 1147.5985715826298 1147.59691490379 19.274 3 0.16930371629486177 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000466325.1_1_X:153581267-153581814:-|nuORF'] 22464 17314 ETHFGFETV True PC9_epitope_Rep1 1065.47672511445 1065.47562993586 71.415 2 0.1693035333475542 0.0006801564359802754 0.9438714419765777 ['ENSG00000110871|ENST00000288532|COQ5', 'ENST00000547736.1_1_12:120964341-120966944:-|nuORF', 'ENST00000547448.1_1_12:120965158-120966944:-|nuORF'] 42955 6470 IGAEVYHNLK True NCI_RA007_Epitope_Rep2 1142.60840799034 1142.60730993586 29.775 2 0.16929314742394977 0.0006801564359802754 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 101709 5997 SPGLQKEAV True PC9_epitope_Rep3 927.5025459394699 927.50144993586 28.121 2 0.1692894179293685 0.0006801564359802754 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 17111 14528 EGSPIKVTL True PC9_epitope_Rep2 942.53859709502 942.53750993586 61.155 2 0.16928538397375045 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF'] 11055 11166 DDPHAC[Carbamidomethyl]YSTVF True H1975_Epitope_Rep3 1310.5237522392902 1310.52264993586 48.047 2 0.1692845296091904 0.0006801564359802754 0.9438714419765777 ['CON__P02769'] 175 9906 AAEEGLREL True PC9_epitope_Rep2 986.5032742154599 986.50216993586 43.434 2 0.16928189634465338 0.0006801564359802754 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 128470 9668 VSEVSSLNY True H1975_Epitope_Rep1 996.4763907612801 996.47584496793 42.114 1 0.16927462704157997 0.0006801564359802754 0.9438714419765777 ['ENSG00000117000|ENST00000372771|RLF'] 49322 10851 KIAPNTPQL True PC9_epitope_Rep1 980.5654805492 980.56438993586 46.624 2 0.16927086438261452 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 102582 17665 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51234993586 72.962 2 0.16927001628680308 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 132400 19133 VYNENLVHMI True PC9_epitope_Rep5 1230.60669373818 1230.60558993586 78.629 2 0.16926451210691046 0.0006801564359802754 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 92284 5479 RQLENGTTL True NCI_RA007_Epitope_Rep4 1030.5407223533398 1030.5396299358601 27.661 2 0.1692640767821061 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'NCAPG2-ESYT2|1|fusion', 'nc|ENSG00000117868|A0FGR8-5|ESYT2', 'ENST00000435514.3_1_7:158526900-158536411:-|nuORF'] 139419 7613 YTEKNGQLIY True H1975_Epitope_Rep3 1227.6135529404298 1227.61244993586 34.264 2 0.16926175032361168 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 88875 7000 REAEIYQTV True NCI_RA007_Epitope_Rep3 1107.5560380643099 1107.5549499358601 34.644 2 0.16926034072415572 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant'] 32590 10028 GHDASQITL True PC9_epitope_Rep1 940.46140940348 940.46030993586 43.441 2 0.1692559711093581 0.0006801564359802754 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 67522 15295 LTELPPLDDY True H1975_Epitope_Rep3 1174.57577044938 1174.5746699358601 64.24 2 0.169250419637184 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 13181 11469 DLTDYLM[Oxidation]K True H1975_Epitope_Rep3 1013.47394861357 1013.47284993586 49.237 2 0.16924548398600042 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 113316 16557 TQILSVPKV True PC9_epitope_Rep3 983.6015317047498 983.60042993586 68.827 2 0.16924094362461078 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 107182 21261 SYNPLWLRI True PC9_epitope_Rep3 1160.6342288153598 1160.63312993586 87.074 2 0.16923826180953985 0.0006801564359802754 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 99512 5586 SLESINSR True PC9_epitope_Rep1 904.46140940348 904.46030993586 26.315 2 0.16923737196346386 0.0006801564359802754 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 87797 18575 QVIEELFKA True PC9_epitope_Rep4 1075.5913609438699 1075.59026993586 79.525 2 0.16923611780577413 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000137513|Q96I59-2|NARS2', 'ENSG00000137513|ENST00000281038|NARS2'] 107178 11279 SYNPITHQL True PC9_epitope_Rep4 1071.5349086969102 1071.53380993586 51.162 2 0.16923410074622738 0.0006801564359802754 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122'] 114820 19597 TTDFIFNLY True H1975_Epitope_Rep3 1132.54407639828 1132.5429699358601 82.106 2 0.16922834999345807 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 72712 21980 MYPYIFHVL True PC9_epitope_Rep1 1181.59433814933 1181.59324993586 89.367 2 0.16922612029102926 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 46388 10383 ITIFEKQEY True H1975_Epitope_Rep3 1169.5968402471299 1169.59574993586 44.994 2 0.16922580003806012 0.0006801564359802754 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF'] 42957 6064 IGAEVYHNLK True NCI_RA007_Epitope_Rep4 1142.60840799034 1142.6067749037902 29.941 3 0.16922578625335222 0.0006801564359802754 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 132126 7367 VYISEHEHF True NCI_RA007_Epitope_Rep2 1159.5298233164701 1159.5281849037901 33.28 3 0.16922237570258458 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 89381 10218 REMEEVLTV True H1975_Epitope_Rep2 1104.54851015572 1104.54740993586 44.308 2 0.16921156053022512 0.0006801564359802754 0.9438714419765777 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 32417 6438 GGGQIIPTAR True NCI_RA007_Epitope_Rep1 968.5403284305199 968.53922993586 29.063 2 0.16920858630961655 0.0006801564359802754 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 2176 6341 AEMPQNYRP True NCI_RA007_Epitope_Rep4 1104.5022286696399 1104.50112993586 30.995 2 0.1691982741091204 0.0006801564359802754 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 69962 20006 LYEKDIQLF True PC9_epitope_Rep1 1167.6175756917098 1167.61646993586 81.781 2 0.16919614775589328 0.0006801564359802754 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 105991 13081 SVLKSIQEV True PC9_epitope_Rep2 1001.57571087973 1001.5746099358599 55.593 2 0.16918658826276126 0.0006801564359802754 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 109918 13887 THQTIVVQL True PC9_epitope_Rep2 1037.58694426977 1037.58584993586 58.697 2 0.16916932980773847 0.0006801564359802754 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 1971 8481 AEITDEDNSIA True H1975_Epitope_Rep3 1176.5146267448001 1176.51352993586 37.607 2 0.16916847826350467 0.0006801564359802754 0.9438714419765777 ['ENSG00000161800|ENST00000312377|RACGAP1'] 92279 17823 RQLEEEGITFV True PC9_epitope_Rep2 1319.6721304457096 1319.6710299358601 73.851 2 0.16916622699689948 0.0006801564359802754 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 9168 14462 AVNPKFLAV True PC9_epitope_Rep4 957.5647522732099 957.56364993586 63.539 2 0.16916417751511342 0.0006801564359802754 0.9438714419765777 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 76527 12907 NTDNLLTEY True H1975_Epitope_Rep2 1081.49276910141 1081.49166993586 54.76 2 0.16916329298216576 0.0006801564359802754 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF'] 59829 13518 LHDPVSISV True PC9_epitope_Rep6 965.5181960036101 965.51708993586 63.721 2 0.1691456160887892 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 108450 10227 TEELAYLK True PC9_epitope_Rep6 965.50696261357 965.50586993586 49.99 2 0.16914184034028096 0.0006801564359802754 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 95483 20502 SAMEVVPAL True PC9_epitope_Rep5 915.4735543103099 915.47244993586 83.9 2 0.1691407399611116 0.0006801564359802754 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 63971 10037 LQAETSQQL True PC9_epitope_Rep1 1016.51383889916 1016.51274993586 43.475 2 0.16913858166406093 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 72617 9308 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep1 1074.57433136118 1074.5732299358601 40.658 2 0.16911609408956632 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 31565 10010 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51676993586 43.44 2 0.16911589350987066 0.0006801564359802754 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 10080 6051 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep5 1119.5171508382302 1119.51604993586 29.957 2 0.16911453137499155 0.0006801564359802754 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 140801 16847 YYSPHGHILVL True PC9_epitope_Rep1 1297.68190728377 1297.68080993586 69.627 2 0.1691124968549833 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 72419 6978 MTERQALSY True H1975_Epitope_Rep3 1097.5175443806097 1097.51644993586 31.802 2 0.16911160372223547 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000480468.1_1_11:116728475-116732017:-|nuORF', 'nc|ENSG00000160584|Q9Y2K2-6|SIK3'] 133040 19987 VYVSDIQEL True PC9_epitope_Rep3 1064.5389910178399 1064.5378899358602 82.125 2 0.169111469790204 0.0006801564359802754 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 28075 9549 FRDQNPEQL True PC9_epitope_Rep3 1145.5465360097699 1145.54542993586 41.679 2 0.16911086564448866 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 41084 14227 HYLPDLHHL True PC9_epitope_Rep1 1143.5825275956702 1143.5808749037901 59.549 3 0.16910557109225127 0.0006801564359802754 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 63318 21419 LPDIFEAQIA True PC9_epitope_Rep4 1115.58627556343 1115.5851699358602 90.565 2 0.1691029253018537 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 139550 17171 YTLSKTEFL True PC9_epitope_Rep2 1100.5753765265601 1100.57426993586 71.308 2 0.1691022110084231 0.0006801564359802754 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 2047 12570 AELENLVNQAA True H1975_Epitope_Rep2 1170.58806646858 1170.58747496793 53.444 1 0.16910024709613575 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 97959 9213 SHQTGVVAL True PC9_epitope_Rep5 910.4872302284999 910.48612993586 40.384 2 0.16909870350515657 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 40104 5773 HRDGALTQL True PC9_epitope_Rep4 1009.53049202281 1009.52938993586 29.058 2 0.16909131042091358 0.0006801564359802754 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 9003 8734 AVIDVGINR True NCI_RA007_Epitope_Rep4 955.5450794577899 955.5439899358599 40.389 2 0.16908816290777545 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 21799 16469 ESDLPDELLY True H1975_Epitope_Rep1 1192.54994962436 1192.54884993586 68.717 2 0.16908674024613993 0.0006801564359802754 0.9438714419765777 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 89786 14442 RFEEAHFTF True PC9_epitope_Rep4 1182.5458077337796 1182.54415490379 63.46 3 0.16907889023470538 0.0006801564359802754 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 119130 7675 VEILANDQGNR True PC9_epitope_Rep3 1227.6207635791898 1227.6196699358602 34.519 2 0.16907845112924225 0.0006801564359802754 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 47602 15260 IYNQVKQII True PC9_epitope_Rep3 1117.64954452633 1117.64844993586 63.847 2 0.16907167558804218 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 93872 8938 RVFVVGVGMTK True NCI_RA007_Epitope_Rep4 1191.67979910879 1191.67870993586 41.214 2 0.16907135502513707 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 27008 20426 FLLGPRLVLA True PC9_epitope_Rep4 1097.6961007959299 1097.69500993586 86.716 2 0.16906543645296238 0.0006801564359802754 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 36644 19531 GVLPNIQAV True PC9_epitope_Rep4 909.5283667644899 909.52726993586 83.247 2 0.1690451909304137 0.0006801564359802754 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 6859 13761 AQIEVVPSA True PC9_epitope_Rep4 912.4916469025999 912.49054993586 60.827 2 0.1690411492034331 0.0006801564359802754 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 38821 7093 HIDVGGHMY True H1975_Epitope_Rep2 1027.45455020123 1027.4534499358601 32.215 2 0.16902790848692076 0.0006801564359802754 0.9438714419765777 ['ENSG00000134504|ENST00000580059|KCTD1', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15'] 99607 19779 SLFPGKLEV True PC9_epitope_Rep5 988.5593325396 988.55822993586 81.125 2 0.1690207278558976 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 40998 8972 HYEVEILDAK True NCI_RA007_Epitope_Rep1 1215.6135529404298 1215.61244993586 38.9 2 0.16901442461362173 0.0006801564359802754 0.9438714419765777 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000596073.5_1_19:14640508-14673988:+|nuORF', 'ENST00000600083.5_1_19:14640508-14673988:+|nuORF', 'nc|ENSG00000099797|Q9NZ01-2|TECR'] 132330 22943 VYLPPEAFTF True PC9_epitope_Rep5 1182.5961119711399 1182.5950099358602 93.239 2 0.16901158783986098 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 36186 21117 GVFPDNFVKL True PC9_epitope_Rep1 1134.60734536118 1134.6062499358602 86.056 2 0.16901109549750334 0.0006801564359802754 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 67812 22867 LTIDDGIFEV True PC9_epitope_Rep5 1120.56520576568 1120.5641099358602 92.955 2 0.16900899713667095 0.0006801564359802754 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 64507 9147 LQYYDISAK True NCI_RA007_Epitope_Rep2 1099.5549754351498 1099.5538699358601 40.187 2 0.16900689486082365 0.0006801564359802754 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 73985 13829 NHQDVVNIL True PC9_epitope_Rep4 1050.54580773378 1050.54470993586 61.092 2 0.16900642480849193 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'MPDZ|p.S1510Efs*25|1|0.23|ENSG00000107186|chr9:13126713-13126714|-/A|frameshift_variant'] 134523 15605 WVDSDQLLY True H1975_Epitope_Rep3 1137.53423999057 1137.5331499358601 65.441 2 0.1690035696453003 0.0006801564359802754 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 25612 6397 FETLQAQAGK True NCI_RA007_Epitope_Rep1 1091.5611234447497 1091.56002993586 28.908 2 0.1690021829195633 0.0006801564359802754 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 116496 6541 TYDNVHQQF True NCI_RA007_Epitope_Rep4 1150.5043368446202 1150.5032299358602 31.773 2 0.1690005138829898 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 103537 16105 SRDDNMFQI True PC9_epitope_Rep4 1124.49205790876 1124.4909699358602 69.885 2 0.1689949351271639 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 38523 6357 HHDSHSSVIL True PC9_epitope_Rep1 1130.5468703629401 1130.54521490379 29.261 3 0.1689914526988439 0.0006801564359802754 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 68726 16708 LVDEWLDSY True H1975_Epitope_Rep3 1138.51825557326 1138.51767496793 69.792 1 0.16898208667758086 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 73474 10574 NEVTDYAIA True H1975_Epitope_Rep1 994.46074069714 994.4596499358599 45.626 2 0.16897931407319486 0.0006801564359802754 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 8441 5753 ATSEIFASK True NCI_RA007_Epitope_Rep5 952.48656152216 952.48546993586 28.817 2 0.16897178449273373 0.0006801564359802754 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 29475 14619 FVIDLQTRL True H1975_Epitope_Rep2 1103.63389446219 1103.63278993586 61.392 2 0.16896790355956492 0.0006801564359802754 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'ITGB4-RBM39|1|fusion', 'ENST00000471635.5_1_20:34297104-34301010:-|nuORF'] 92368 5840 RQQEVETEL True NCI_RA007_Epitope_Rep5 1130.5567663402999 1130.5556699358601 29.148 2 0.16896782583381265 0.0006801564359802754 0.9438714419765777 ['ENSG00000104852|ENST00000598441|SNRNP70', 'nc|ENSG00000104852|P08621-3|SNRNP70', 'nc|ENSG00000104852|P08621-2|SNRNP70'] 76514 11090 NTDLGNDLY True H1975_Epitope_Rep3 1023.4509042894299 1023.4498099358599 47.75 2 0.16896117366946478 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 17180 7180 EHAGGEVEL True PC9_epitope_Rep2 939.42977492203 939.42866993586 33.008 2 0.1689565696219765 0.0006801564359802754 0.9438714419765777 ['ENSG00000218891|ENST00000325421|ZNF579'] 120289 16653 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.50677496793 69.061 1 0.1689487113331635 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 113234 7301 TQDTQPHYI True PC9_epitope_Rep2 1101.50908787189 1101.50798993586 33.468 2 0.16894854747097587 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 43619 19268 IIIPEIQKV True PC9_epitope_Rep5 1051.66413196131 1051.66302993586 79.157 2 0.16894377255740478 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 91650 16990 RPFQSELFA True PC9_epitope_Rep1 1093.55564414149 1093.5545499358602 70.176 2 0.1689408242038451 0.0006801564359802754 0.9438714419765777 ['ENST00000488504.5_1_22:50695267-50699938:-|nuORF', 'nc|ENSG00000188130|P53778-2|MAPK12', 'ENSG00000188130|ENST00000215659|MAPK12'] 106732 19368 SYDPDFNQL True PC9_epitope_Rep2 1097.46655435357 1097.46597496793 79.875 1 0.16894038622011137 0.0006801564359802754 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 103541 17381 SRDDNMFQI True PC9_epitope_Rep5 1124.49205790876 1124.4909699358602 71.856 2 0.16893474856965565 0.0006801564359802754 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 115466 17005 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep1 1178.5641606002998 1178.56306993586 70.232 2 0.16891974735132737 0.0006801564359802754 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 115588 23335 TVIDQIPFL True PC9_epitope_Rep5 1044.58554728744 1044.5844499358602 94.739 2 0.168917832342126 0.0006801564359802754 0.9438714419765777 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 39335 3622 HLSLSHNPEQK True NCI_RA007_Epitope_Rep2 1288.65239806064 1288.65076490379 18.741 3 0.1689176183582116 0.0006801564359802754 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 15168 8925 EAESSPFVER True PC9_epitope_Rep5 1149.5302172392899 1149.52912993586 39.275 2 0.16891697273097045 0.0006801564359802754 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 65249 9694 LSEGFSIHTR True PC9_epitope_Rep5 1145.5829215184901 1145.58127490379 42.255 3 0.16890175518285383 0.0006801564359802754 0.9438714419765777 ['ENSG00000008018|ENST00000262193|PSMB1'] 48630 9620 KEIQETWTV True H1975_Epitope_Rep3 1132.57643915572 1132.57534993586 42.017 2 0.16890115246755097 0.0006801564359802754 0.9438714419765777 ['ENSG00000140534|ENST00000268138|TICRR', 'nc|ENSG00000140534|Q7Z2Z1-2|TICRR'] 68813 8928 LVDSKGFDEY True H1975_Epitope_Rep3 1171.5397192938299 1171.5386299358602 39.339 2 0.16889833957626774 0.0006801564359802754 0.9438714419765777 ['ENSG00000164687|ENST00000297258|FABP5'] 72732 19935 MYSDVWKQL True PC9_epitope_Rep5 1168.5586809166 1168.55758993586 81.734 2 0.16889699340900335 0.0006801564359802754 0.9438714419765777 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 39481 19174 HPAAFPLPVV True PC9_epitope_Rep4 1046.59130137422 1046.59020993586 81.85 2 0.16889264626327385 0.0006801564359802754 0.9438714419765777 ['ENSG00000108523|ENST00000262482|RNF167'] 136903 13804 YKDGTELEL True PC9_epitope_Rep1 1066.51825557326 1066.51714993586 57.941 2 0.16889223842761697 0.0006801564359802754 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 132148 9197 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 40.718 3 0.16888184814273788 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 40654 20354 HTILDLPAV True PC9_epitope_Rep5 977.55458151233 977.55348993586 83.326 2 0.16886966671814657 0.0006801564359802754 0.9438714419765777 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 85352 10724 QLDNQLDAY True H1975_Epitope_Rep2 1078.4931034545798 1078.49200993586 46.276 2 0.16886687795806057 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 52591 15985 KPYNVYITV True PC9_epitope_Rep2 1095.59644632431 1095.5953499358602 66.74 2 0.16886451286339593 0.0006801564359802754 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 103008 19959 SQITPHAIIFL True PC9_epitope_Rep4 1238.7023083751799 1238.70120993586 84.907 2 0.1688627818545606 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 129406 5686 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 26.869 2 0.16886263379444685 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 87685 8366 QVDLNQQQY True H1975_Epitope_Rep3 1134.5305515924601 1134.5294499358602 37.163 2 0.1688565842152066 0.0006801564359802754 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 32751 7633 GHYTEGAELVD True NCI_RA007_Epitope_Rep1 1189.5251318588498 1189.5240299358602 33.684 2 0.16885501514457793 0.0006801564359802754 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 74126 12736 NHVTPPNVSL True PC9_epitope_Rep5 1076.56145779792 1076.56036993586 53.997 2 0.16885371736024196 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 54226 21891 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 89.017 2 0.16885324694932585 0.0006801564359802754 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 41022 15827 HYGLPVVV True PC9_epitope_Rep6 882.49633836022 882.49524993586 73.142 2 0.1688514237253796 0.0006801564359802754 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 17750 7766 EHTNAIGTL True PC9_epitope_Rep4 954.4770594676199 954.47596993586 37.267 2 0.16884464519682693 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 39953 9087 HQQSIPAVL True NCI_RA007_Epitope_Rep4 991.5450794577898 991.5439899358599 41.785 2 0.16883813155474525 0.0006801564359802754 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 88322 14551 QYLGQIQHI True PC9_epitope_Rep5 1098.5821932425 1098.58108993586 60.97 2 0.16883455947215245 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 34721 8102 GQNPTEAEL True NCI_RA007_Epitope_Rep1 957.44033960573 957.43924993586 35.514 2 0.16883386371681297 0.0006801564359802754 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 70179 20878 LYLKALEGF True PC9_epitope_Rep3 1052.5906326678798 1052.5895299358601 85.58 2 0.16882646630537448 0.0006801564359802754 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 96611 13890 SEMLEIVQA True H1975_Epitope_Rep2 1018.5004973341398 1018.49940993586 58.572 2 0.16882378852191815 0.0006801564359802754 0.9438714419765777 ['ENSG00000115756|ENST00000307845|HPCAL1'] 124619 5029 VLIAAHGNSLR True NCI_RA007_Epitope_Rep3 1149.66184054553 1149.66019490379 26.776 3 0.1688163802776708 0.0006801564359802754 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 26053 14259 FHDMGGVQL True PC9_epitope_Rep4 1002.4593012284997 1002.4582099358599 62.751 2 0.1688123800258071 0.0006801564359802754 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 132842 21701 VYTPTDTLVF True PC9_epitope_Rep3 1154.5859412102598 1154.5848499358601 88.765 2 0.1688119164492043 0.0006801564359802754 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 107114 20655 SYMGHFDLL True PC9_epitope_Rep5 1081.49026700361 1081.48967496793 84.502 1 0.16880938552074443 0.0006801564359802754 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 75407 14912 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.5279899358602 62.622 2 0.1688078306573484 0.0006801564359802754 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 52144 19723 KLVGEFLEV True PC9_epitope_Rep2 1032.5855472874398 1032.5844499358602 81.254 2 0.16880732314938487 0.0006801564359802754 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 21259 12391 ERIGETPEL True PC9_epitope_Rep5 1042.5294889632999 1042.52838993586 52.659 2 0.16880079721573604 0.0006801564359802754 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 18285 8794 EITALAPSTM[Oxidation]K True PC9_epitope_Rep2 1176.6060254122801 1176.6049299358601 39.18 2 0.16879798918541294 0.0006801564359802754 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 87525 13169 QTHSVFVNV True PC9_epitope_Rep3 1029.5243440132099 1029.5232499358601 55.684 2 0.16879654671904232 0.0006801564359802754 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 106252 8842 SVQETVLPIK True NCI_RA007_Epitope_Rep3 1112.6441247927198 1112.64302993586 41.872 2 0.16879376939586194 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000169057|P51608|MECP2', 'ENSG00000169057|ENST00000453960|MECP2'] 45400 12311 ISDRLIGIY True H1975_Epitope_Rep2 1048.59169529704 1048.5905899358602 52.438 2 0.16878837937558103 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'SMC4|p.E1257Q|1|0.11|ENSG00000113810|chr3:160433711-160433711|G/C|missense_variant'] 89122 7213 REFKQFVEA True NCI_RA007_Epitope_Rep4 1152.5927579262 1152.5916699358602 34.378 2 0.16877971759956475 0.0006801564359802754 0.9438714419765777 ['ENST00000564124.5_1_16:48580029-48653834:-|nuORF', 'ENSG00000102921|ENST00000262384|N4BP1'] 102747 4851 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 23.527 2 0.168779274709465 0.0006801564359802754 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 88406 12815 QYQEAFQKL True PC9_epitope_Rep2 1153.5767735088898 1153.57566993586 54.594 2 0.16876689874261966 0.0006801564359802754 0.9438714419765777 ['ENSG00000082516|ENST00000285873|GEMIN5'] 76300 11039 NSDVVEQIY True H1975_Epitope_Rep1 1065.49785448185 1065.49727496793 47.424 1 0.16876305141566966 0.0006801564359802754 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 138151 19937 YQLPEILRT True PC9_epitope_Rep1 1131.6288090817498 1131.6277099358601 81.508 2 0.16876072238389017 0.0006801564359802754 0.9438714419765777 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 107066 21581 SYLSSILRF True PC9_epitope_Rep2 1084.59169529704 1084.5905899358602 88.483 2 0.16874279669674802 0.0006801564359802754 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 40832 16384 HVLDVIHEV True PC9_epitope_Rep3 1059.57129420563 1059.57018993586 68.16 2 0.1687425380125721 0.0006801564359802754 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 44847 19349 IPYHIVNIV True PC9_epitope_Rep2 1066.6175161220601 1066.61640993586 79.802 2 0.16874122552945353 0.0006801564359802754 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 29328 15964 FVDRGFYSV True PC9_epitope_Rep2 1088.52909504048 1088.5279899358602 66.659 2 0.16873078584204843 0.0006801564359802754 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 27810 19701 FQFGVPQAL True PC9_epitope_Rep6 1005.5283667644898 1005.52726993586 88.436 2 0.16872568114955058 0.0006801564359802754 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 64439 15991 LQSDRVLYL True PC9_epitope_Rep4 1105.6131590176099 1105.61206993586 69.442 2 0.16872505936901483 0.0006801564359802754 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4'] 9029 18584 AVIGDVIRV True PC9_epitope_Rep3 940.57056592964 940.56946993586 76.709 2 0.16872378844142563 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 22284 10821 ETDSFKLAY True H1975_Epitope_Rep2 1072.5076908895599 1072.5065899358601 46.652 2 0.16871490261833846 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000275066|Q9UMZ2-6|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-9|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-4|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-8|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-3|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-7|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-5|SYNRG', 'ENSG00000275066|ENST00000612223|SYNRG'] 8176 5119 ATGDM[Oxidation]SGLLK True NCI_RA007_Epitope_Rep5 1007.4957466873099 1007.49464993586 26.387 2 0.1687074169971491 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 31893 4382 GEQGARIQSV True H1975_Epitope_Rep2 1043.53597132607 1043.5348699358601 21.967 2 0.1687058335382797 0.0006801564359802754 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 89107 4915 REFDRRFSP True NCI_RA007_Epitope_Rep5 1208.6050539453997 1208.60341490379 25.601 3 0.1687016496328007 0.0006801564359802754 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 85806 2601 QLYWSHPRK True NCI_RA007_Epitope_Rep3 1213.6356257976897 1213.63399490379 14.706 3 0.16869811720947697 0.0006801564359802754 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 85133 9220 QITQINHGL True PC9_epitope_Rep2 1022.5508931142199 1022.5497899358601 40.804 2 0.16869201112066387 0.0006801564359802754 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 70342 21068 LYPQFMFHL True PC9_epitope_Rep4 1194.5895871220598 1194.58848993586 89.197 2 0.1686913459517505 0.0006801564359802754 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 138043 5087 YQDPHSTAV True PC9_epitope_Rep5 1016.45632402304 1016.45522993586 24.593 2 0.16868308565018283 0.0006801564359802754 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 116793 15978 TYLPTSPLL True NCI_RA007_Epitope_Rep4 1003.55899818643 1003.55790993586 69.331 2 0.16867937593183346 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 136527 8002 YHQHLQEQL True PC9_epitope_Rep1 1194.57817049122 1194.57652490379 35.6 3 0.16867905890061494 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 113786 6197 TRDSKPIAL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 28.652 2 0.16865940657989675 0.0006801564359802754 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 3871 17109 AHDDAIWSV True PC9_epitope_Rep3 1012.46140940348 1012.46030993586 70.962 2 0.16865567491515213 0.0006801564359802754 0.9438714419765777 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 19979 12729 EMEEKYYRF True PC9_epitope_Rep1 1293.5699738762899 1293.5688699358602 53.836 2 0.1686454151917196 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 4304 14592 AILDYLITK True NCI_RA007_Epitope_Rep5 1048.61684741572 1048.61574993586 62.797 2 0.16864476730246714 0.0006801564359802754 0.9438714419765777 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'nc|ENSG00000100697|Q9UPY3-3|DICER1'] 40396 15127 HRTEMDWVL True PC9_epitope_Rep6 1185.5600778989299 1185.55843490379 70.248 3 0.16864300615977523 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 28805 16753 FTDESYLELY True H1975_Epitope_Rep3 1278.5655996885 1278.5650749679298 69.975 1 0.16864106016781144 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 132832 19566 VYTKTISLW True PC9_epitope_Rep3 1109.6120963884498 1109.61098993586 80.496 2 0.16863206675762155 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1'] 29215 12841 FVDDEELAY True H1975_Epitope_Rep2 1099.47097102767 1099.46986993586 54.504 2 0.16862797633590412 0.0006801564359802754 0.9438714419765777 ['ENSG00000167113|ENST00000300452|COQ4', 'nc|ENSG00000167113|Q9Y3A0-2|COQ4', 'ENST00000461102.1_1_9:131094341-131094578:+|nuORF'] 35660 8288 GTMTGMLYK True NCI_RA007_Epitope_Rep5 1000.47217441132 1000.47106993586 38.557 2 0.168627951555485 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 47699 19973 IYPVDLGDKF True PC9_epitope_Rep5 1165.6019256275697 1165.60082993586 81.878 2 0.168626282389851 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-3|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H'] 11737 5887 DHHENKYLL True PC9_epitope_Rep4 1167.56727145435 1167.56563490379 29.543 3 0.16862315236319664 0.0006801564359802754 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 75019 14519 NMDNMFESY True H1975_Epitope_Rep1 1149.41069635357 1149.4095899358601 61.05 2 0.1686217514227848 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 125197 6178 VLQIDNAR True NCI_RA007_Epitope_Rep2 927.5137793295099 927.51268993586 28.638 2 0.16861826424588608 0.0006801564359802754 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'CON__P19001', 'CON__Q6IFX2', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000427733.1_1_13:90882929-90883235:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 75120 19962 NMVDIIHSV True PC9_epitope_Rep1 1026.51681610462 1026.51570993586 81.608 2 0.1686067290677443 0.0006801564359802754 0.9438714419765777 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 88922 9372 REDEFHISV True H1975_Epitope_Rep2 1130.5356369729 1130.53452993586 41.011 2 0.16860666697774593 0.0006801564359802754 0.9438714419765777 ['ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA'] 106920 8668 SYISRTNQL True PC9_epitope_Rep2 1080.5563724174801 1080.55526993586 38.706 2 0.16860541505954155 0.0006801564359802754 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 127573 21390 VQWENSFVSV True PC9_epitope_Rep3 1193.57168812845 1193.5705899358602 87.575 2 0.168604447627595 0.0006801564359802754 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 17363 5507 EHDTTEYKL True PC9_epitope_Rep4 1134.51931820242 1134.51766490379 27.942 3 0.16859286449995367 0.0006801564359802754 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 124625 7815 VLIAAHGNSLR True PC9_epitope_Rep5 1149.66184054553 1149.66019490379 35.005 3 0.16858970527906234 0.0006801564359802754 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 138898 13153 YSDVMLENY True H1975_Epitope_Rep1 1132.47467650912 1132.47356993586 55.686 2 0.16858586741076118 0.0006801564359802754 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426', 'ZNF426|p.N172Tfs*37|1|0.12|ENSG00000130818|chr19:9529532-9529532|C/-|frameshift_variant', 'ENSG00000198028|ENST00000301480|ZNF560'] 119536 10155 VEQWPYRAVA True H1975_Epitope_Rep3 1217.61930702721 1217.61820993586 44.103 2 0.16858100432872974 0.0006801564359802754 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 63962 12097 LQAEIEGLK True PC9_epitope_Rep1 999.5600608155898 999.55896993586 51.391 2 0.1685786634167464 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__H-INV:HIT000292931'] 28028 16751 FRADDTFEAL True PC9_epitope_Rep6 1183.55095268387 1183.54984993586 76.923 2 0.16857091120459888 0.0006801564359802754 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 67162 15542 LTDFDIRFY True H1975_Epitope_Rep1 1188.5815245361598 1188.5804299358601 65.061 2 0.1685688078767391 0.0006801564359802754 0.9438714419765777 ['ENSG00000070770|ENST00000262506|CSNK2A2', 'ENST00000562367.1_1_16:58208309-58230657:-|nuORF'] 105997 20060 SVLKSLVEI True PC9_epitope_Rep1 986.6011973515799 986.60010993586 81.987 2 0.16856425011623127 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 106921 8759 SYISRTNQL True PC9_epitope_Rep2 1080.5563724174801 1080.55526993586 39.047 2 0.16855972847538275 0.0006801564359802754 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 21403 21648 ERNDLIVFL True PC9_epitope_Rep1 1117.6131590176099 1117.61206993586 88.097 2 0.16855675194655115 0.0006801564359802754 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1'] 44792 19811 IPTPIVGV True PC9_epitope_Rep5 794.49019035062 794.4896449679301 81.25 1 0.16855636895956724 0.0006801564359802754 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 103779 9992 SRFPQGAQL True PC9_epitope_Rep4 1002.5246783663797 1002.52358993586 46.093 2 0.1685505232907849 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 89697 4676 REYDTSKIEA True NCI_RA007_Epitope_Rep4 1210.5829810881398 1210.58188993586 24.408 2 0.1685501793003084 0.0006801564359802754 0.9438714419765777 ['ENSG00000115364|ENST00000393909|MRPL19'] 76350 9250 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.4600299358601 40.536 2 0.16854838901417446 0.0006801564359802754 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 2890 10734 AEYSNTWTP True H1975_Epitope_Rep3 1067.45598966987 1067.4548899358601 46.367 2 0.16854442058879754 0.0006801564359802754 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 75657 19259 NQSGQVFGL True PC9_epitope_Rep5 948.4664947839199 948.46538993586 79.121 2 0.16854125909537107 0.0006801564359802754 0.9438714419765777 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 109880 14665 THMTAIVGM True PC9_epitope_Rep5 959.4568587003499 959.45576993586 61.412 2 0.16853713126554248 0.0006801564359802754 0.9438714419765777 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 52019 15033 KLFNGTFLKA True PC9_epitope_Rep2 1137.65462990677 1137.65299490379 63.081 3 0.16852872013529652 0.0006801564359802754 0.9438714419765777 ['ENST00000411858.1_1_7:6854458-6863725:-|nuORF', 'ENSG00000146574|ENST00000316731|CCZ1B', 'ENSG00000122674|ENST00000325974|CCZ1'] 24675 7455 FATHAAALSVR True PC9_epitope_Rep2 1142.6196413803798 1142.61799490379 34.05 3 0.16852824135918384 0.0006801564359802754 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 106022 13387 SVLNLVIVK True NCI_RA007_Epitope_Rep4 983.6379172134699 983.63682993586 58.664 2 0.16852418830313093 0.0006801564359802754 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 104724 11937 STDHIPILY True H1975_Epitope_Rep3 1057.54441075145 1057.5433099358602 51.071 2 0.16852281682754836 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 117729 19896 VALDKVIEI True PC9_epitope_Rep3 998.6011973515799 998.60010993586 81.771 2 0.16852193383156613 0.0006801564359802754 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 28112 14663 FREGESVTVL True PC9_epitope_Rep5 1135.5873381925899 1135.58624993586 61.404 2 0.16851904728195927 0.0006801564359802754 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 103285 14666 SQTLVSQGL True PC9_epitope_Rep5 931.4974605590301 931.49691496793 61.415 1 0.16851710640331968 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 138961 4148 YSENVERTKY True H1975_Epitope_Rep2 1287.60953018915 1287.60787490379 21.054 3 0.16851324227266032 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.M758Sfs*26|1|0.14|ENSG00000170921|chr17:63355299-63355303|GACAT/-|frameshift_variant'] 104225 9413 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep3 1071.45427579815 1071.45377496793 41.209 1 0.16850863482551207 0.0006801564359802754 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 84863 10694 QHQSGIVQL True PC9_epitope_Rep1 1008.5352430500798 1008.53414993586 46.025 2 0.16850756669093375 0.0006801564359802754 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 102425 12410 SPVYVGRVV True PC9_epitope_Rep1 974.5549158654999 974.55380993586 52.598 2 0.16850637815762032 0.0006801564359802754 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 113184 12993 TQDGTPITV True PC9_epitope_Rep5 930.4658260775799 930.46472993586 54.987 2 0.1685027233607117 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 48809 4692 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 23.142 2 0.16849285428307284 0.0006801564359802754 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 105457 15509 SVASELEKI True PC9_epitope_Rep4 974.5284263341399 974.5273299358599 67.58 2 0.16848831003256107 0.0006801564359802754 0.9438714419765777 ['ENSG00000172244|ENST00000306862|C5orf34'] 53069 11219 KSDEMELLY True H1975_Epitope_Rep1 1126.5216267015398 1126.5205299358602 48.125 2 0.16848484770344155 0.0006801564359802754 0.9438714419765777 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000493082.5_1_5:850626-880074:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-2|BRD9', 'ENST00000495794.5_1_5:864585-881375:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-3|BRD9', 'nc|ENSG00000028310|Q9H8M2-1|BRD9', 'ENST00000495265.5_1_5:864585-889814:-|nuORF', 'nc|ENSG00000028310|Q9H8M2-6|BRD9'] 13328 16454 DMDNQIFGAY True H1975_Epitope_Rep2 1172.4808245187198 1172.4797299358602 68.508 2 0.16847936689206205 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000111912|Q8NI08-5|NCOA7', 'nc|ENSG00000111912|Q8NI08-7|NCOA7', 'nc|ENSG00000111912|Q8NI08-2|NCOA7', 'ENSG00000111912|ENST00000392477|NCOA7'] 113803 6579 TRDSVKTVL True PC9_epitope_Rep1 1017.58185888933 1017.58076993586 30.111 2 0.168479176392207 0.0006801564359802754 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 43929 7879 ILEGELER True NCI_RA007_Epitope_Rep1 957.5131106231698 957.51200993586 34.641 2 0.16847840347572596 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'TPM2|p.E180K|1|0.36|ENSG00000198467|chr9:35685294-35685294|C/T|missense_variant', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 74129 10750 NHVTPPNVSL True PC9_epitope_Rep6 1076.56145779792 1076.56036993586 52.174 2 0.16847573979341135 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 102585 15671 SQANIAQVL True PC9_epitope_Rep6 942.5134449763399 942.51234993586 72.487 2 0.16847395030924966 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 103256 11302 SQSTVKVLI True PC9_epitope_Rep4 973.5807962601699 973.57968993586 51.249 2 0.16846816846573182 0.0006801564359802754 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 40420 11399 HRYGDSEFTV True PC9_epitope_Rep1 1209.54145062933 1209.5398049037901 48.726 3 0.1684663981201251 0.0006801564359802754 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 36597 19521 GVLKEGFLV True PC9_epitope_Rep1 960.5644179200399 960.56332993586 79.908 2 0.16846514859589704 0.0006801564359802754 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2', 'ENST00000557388.1_1_14:67864733-67878776:-|nuORF'] 130947 19571 VVINYTEQL True PC9_epitope_Rep3 1077.57062549929 1077.5695299358601 80.514 2 0.1684642849008401 0.0006801564359802754 0.9438714419765777 ['ENSG00000095015|ENST00000399503|MAP3K1'] 4570 16232 ALAAALAHI True PC9_epitope_Rep2 849.50723739709 849.50614993586 67.681 2 0.1684543867491762 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21', 'ENSG00000107625|ENST00000373585|DDX50'] 52820 18456 KQVEEIFNL True PC9_epitope_Rep4 1118.5971746003 1118.5960699358602 79.061 2 0.16845273580088896 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 93803 20221 RVADILTQL True PC9_epitope_Rep1 1027.60259433391 1027.6014899358602 82.609 2 0.16845089517274636 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 87046 7249 QSDPTQSGMY True H1975_Epitope_Rep2 1112.44443901 1112.4433499358602 32.817 2 0.1684471766578809 0.0006801564359802754 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 139422 13632 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep2 1147.5107280451098 1147.5096299358602 57.574 2 0.16844110246432148 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 104754 10909 STDLQDYTY True H1975_Epitope_Rep3 1104.46113461996 1104.46057496793 47.048 1 0.16844004293627765 0.0006801564359802754 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 108210 5715 TEADSGYTP True H1975_Epitope_Rep2 939.3821560232699 939.38160496793 26.981 1 0.1684369148250207 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000064490|O14593-2|RFXANK', 'nc|ENSG00000064490|O14593-3|RFXANK', 'ENSG00000064490|ENST00000303088|RFXANK'] 74038 20085 NHSELAILL True PC9_epitope_Rep1 1008.5603951687599 1008.55928993586 82.085 2 0.1684363238828918 0.0006801564359802754 0.9438714419765777 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF'] 94642 17287 RYLDLFTSF True NCI_RA007_Epitope_Rep4 1160.5866099165999 1160.58550993586 74.853 2 0.16843412771699526 0.0006801564359802754 0.9438714419765777 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 76585 5955 NTEEEGLKY True H1975_Epitope_Rep2 1081.4927691014097 1081.49217496793 27.888 1 0.16843017643900082 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 116394 13474 TWFNQPARKI True PC9_epitope_Rep3 1259.6774906096698 1259.67583490379 56.88 3 0.16842930151955657 0.0006801564359802754 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 87824 17998 QVIPQFQTV True PC9_epitope_Rep6 1058.5760452328998 1058.57494993586 81.857 2 0.1684234298779334 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 97982 7381 SHSELIHNL True PC9_epitope_Rep4 1048.5301576696402 1048.5290699358602 35.731 2 0.16842103574934775 0.0006801564359802754 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 113319 16234 TQILSVPKV True PC9_epitope_Rep5 983.6015317047498 983.60042993586 67.433 2 0.16841317108972845 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 138728 14603 YSAAWAEYY True H1975_Epitope_Rep2 1122.46582607758 1122.4652749679299 61.329 1 0.16841201412153767 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP', 'ENST00000492724.1_1_1:78411324-78420943:-|nuORF', 'ENST00000487684.1_1_1:78414836-78421090:-|nuORF', 'nc|ENSG00000162613|Q96AE4-2|FUBP1', 'ENSG00000162613|ENST00000370768|FUBP1'] 25336 13914 FEFGVDPSA True H1975_Epitope_Rep2 967.4287122928698 967.42816496793 58.668 1 0.1683992956099516 0.0006801564359802754 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 52823 17296 KQVEEIFNL True PC9_epitope_Rep6 1118.5971746003 1118.5960699358602 79.134 2 0.1683985346187899 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 34601 7733 GQHENIVNL True NCI_RA007_Epitope_Rep3 1022.5145076055 1022.5134099358601 37.54 2 0.16838972189455698 0.0006801564359802754 0.9438714419765777 ['ENSG00000182578|ENST00000675795|CSF1R'] 117186 12860 TYTDVTPRQF True PC9_epitope_Rep2 1226.59315184902 1226.5920499358601 54.767 2 0.1683847290440127 0.0006801564359802754 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 100147 20555 SLLDPVPEV True PC9_epitope_Rep4 967.52261267771 967.52150993586 87.216 2 0.16837939449086892 0.0006801564359802754 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 76636 8814 NTIDPSHPM True PC9_epitope_Rep5 1010.4491304676201 1010.44802993586 38.848 2 0.16837020301697594 0.0006801564359802754 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 64534 8182 LRDEHNYTL True PC9_epitope_Rep5 1159.56218607391 1159.56055490379 36.412 3 0.16836475555610272 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 53358 9755 KTTTIAVEV True PC9_epitope_Rep4 960.5491617787198 960.54806993586 45.161 2 0.16836206847125731 0.0006801564359802754 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 69056 11624 LVIIEGDLER True NCI_RA007_Epitope_Rep1 1155.6499384491499 1155.6488499358602 49.186 2 0.16836031236833995 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF'] 74119 12967 NHVTPPNVSL True PC9_epitope_Rep3 1076.56145779792 1076.56036993586 54.904 2 0.16835815485722186 0.0006801564359802754 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 90712 5621 RKNQGDFSL True NCI_RA007_Epitope_Rep4 1063.5410567065098 1063.53994993586 28.222 2 0.168356062920139 0.0006801564359802754 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF'] 89579 14972 RESFPAPVVIL True H1975_Epitope_Rep2 1226.7023083751799 1226.70120993586 62.742 2 0.16835139847502578 0.0006801564359802754 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 45389 8601 ISDPGVQGY True H1975_Epitope_Rep3 934.43961132974 934.4390649679301 38.075 1 0.16834914775947596 0.0006801564359802754 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 54403 20729 KYSDITIMF True PC9_epitope_Rep5 1116.5525329069999 1116.5514299358601 84.793 2 0.1683469173009712 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000130005|Q14353-2|GAMT', 'ENSG00000130005|ENST00000252288|GAMT'] 98074 16343 SHVIQDIAL True PC9_epitope_Rep5 994.5447451046199 994.54364993586 67.86 2 0.16834570269447768 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10'] 44750 17864 IPRVPSLSV True PC9_epitope_Rep1 966.5862159937799 966.58510993586 73.507 2 0.1683435893589218 0.0006801564359802754 0.9438714419765777 ['ENSG00000152464|ENST00000378197|RPP38'] 6959 22974 AQMEVASFLL True PC9_epitope_Rep1 1107.56343194387 1107.5623299358601 93.17 2 0.16833440486984438 0.0006801564359802754 0.9438714419765777 ['ENST00000488829.1_1_9:89626569-89628063:+|nuORF', 'ENSG00000117399|ENST00000310955|CDC20'] 84546 12153 QHAVEAISL True PC9_epitope_Rep2 966.5134449763399 966.51234993586 52.056 2 0.1683317264533115 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 23714 17255 EYIKFLRSI True PC9_epitope_Rep4 1167.6651945904698 1167.66355490379 74.378 3 0.1683139047356123 0.0006801564359802754 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 317 19481 AAIEIFEKV True PC9_epitope_Rep3 1018.5698972232999 1018.56880993586 80.163 2 0.16831332301691876 0.0006801564359802754 0.9438714419765777 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 126767 6774 VPSLQGEKA True PC9_epitope_Rep1 927.5025459394699 927.50144993586 30.862 2 0.16831232570533727 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 18806 6229 ELEAALQR True H1975_Epitope_Rep3 928.4977949121999 928.49668993586 28.972 2 0.16829936879887542 0.0006801564359802754 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 135611 8866 YEEMGIKPP True H1975_Epitope_Rep3 1062.5055827145798 1062.5044899358602 39.105 2 0.16829742276867835 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000396338.3_1_12:18845807-18846413:+|nuORF', 'ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 88332 20604 QYLQDAYSF True PC9_epitope_Rep1 1133.5029398622898 1133.50184993586 84.07 2 0.16828376461818162 0.0007088331515812432 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 48515 10933 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 50.089 2 0.16828253458373812 0.0007088331515812432 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 99976 19421 SLIRNLEQL True PC9_epitope_Rep2 1084.62405805448 1084.62296993586 80.08 2 0.16828221322488163 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 40744 15567 HTVGELIEV True PC9_epitope_Rep4 995.5287606873098 995.52766993586 67.799 2 0.16828026606170413 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 7481 15377 ASDYFDQLY True H1975_Epitope_Rep1 1120.47130538084 1120.4707749679299 64.419 1 0.1682772610291614 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 67118 11200 LTDDGNKWLY True H1975_Epitope_Rep1 1223.58225281215 1223.58167496793 48.05 1 0.16827657582759437 0.0007088331515812432 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 114020 13272 TRMPDGPVAL True PC9_epitope_Rep4 1055.54336520563 1055.54226993586 58.946 2 0.16827459965148064 0.0007088331515812432 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 64591 9490 LREDSTVSL True PC9_epitope_Rep4 1018.5294889633 1018.52838993586 44.116 2 0.1682720565882495 0.0007088331515812432 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4'] 73879 13604 NHHLFTTTI True PC9_epitope_Rep5 1082.5508931142201 1082.5497899358602 57.35 2 0.16827010478356288 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 106863 15416 SYIEHIFEI True NCI_RA007_Epitope_Rep3 1149.57062549929 1149.57007496793 68.192 1 0.16826657884291193 0.0007088331515812432 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 132396 18646 VYNENLVHMI True PC9_epitope_Rep2 1230.60669373818 1230.60558993586 77.087 2 0.16826508894933417 0.0007088331515812432 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 96497 7757 SELEAALQR True H1975_Epitope_Rep3 1015.5298233164699 1015.52872993586 34.822 2 0.16826397837951865 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 95065 14207 RYSGNQVLF True PC9_epitope_Rep5 1082.55089311422 1082.5497899358602 59.654 2 0.16825898154463384 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 107186 5077 SYNRGDSTF True NCI_RA007_Epitope_Rep4 1045.44648761533 1045.44538993586 26.033 2 0.16824855964376598 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000171560|P02671|FGA', 'ENSG00000171560|ENST00000403106|FGA'] 117731 19872 VALDKVIEI True PC9_epitope_Rep5 998.6011973515799 998.60010993586 81.489 2 0.16824222000030453 0.0007088331515812432 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 39122 16274 HLDLGILYY True H1975_Epitope_Rep1 1105.58079626017 1105.5796899358602 67.951 2 0.16824071151050388 0.0007088331515812432 0.9438714419765777 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 134519 15714 WVDSDQLLY True H1975_Epitope_Rep2 1137.53423999057 1137.5331499358601 65.612 2 0.16823949867782675 0.0007088331515812432 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 87722 11666 QVEEIFNLK True NCI_RA007_Epitope_Rep5 1118.5971746003 1118.5960699358602 51.526 2 0.1682385747618111 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 114392 15223 TSDQATLLLY True H1975_Epitope_Rep2 1123.57610480255 1123.5750099358602 63.713 2 0.1682351191909558 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM'] 47586 9995 IYNGDMEKI True PC9_epitope_Rep6 1081.51139637101 1081.51028993586 49.004 2 0.16822985419179096 0.0007088331515812432 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 6618 18200 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 75.016 2 0.1682258993122258 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 9689 7067 AYHNSPAYL True NCI_RA007_Epitope_Rep4 1034.48214484806 1034.48104993586 33.808 2 0.16822424779092338 0.0007088331515812432 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1', 'ENST00000493660.5_1_17:38792069-38802054:-|nuORF'] 37915 6607 HEDVEALAA True H1975_Epitope_Rep3 953.4454249861699 953.44432993586 30.366 2 0.16822129666634586 0.0007088331515812432 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 109610 17692 THDGGFLSL True PC9_epitope_Rep2 945.45559574705 945.45448993586 73.333 2 0.1682203856688528 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 88445 13405 QYTQALEKF True PC9_epitope_Rep2 1126.5658744720197 1126.56476993586 56.842 2 0.16821183309816845 0.0007088331515812432 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 140091 14332 YVPETVYRV True PC9_epitope_Rep3 1124.5866099165999 1124.58550993586 60.215 2 0.16820917854155049 0.0007088331515812432 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 70016 15650 LYGKIAEAF True PC9_epitope_Rep4 1010.5436824754598 1010.54258993586 68.125 2 0.1682085595857261 0.0007088331515812432 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 116527 19870 TYEGIFKTL True PC9_epitope_Rep1 1070.56481184286 1070.56370993586 81.248 2 0.16820453393282608 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 17747 8942 EHTNAIGTL True PC9_epitope_Rep1 954.4770594676199 954.47596993586 39.236 2 0.16820206838065493 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 34441 15856 GQAFVIFK True PC9_epitope_Rep4 908.5119884243599 908.51088993586 68.919 2 0.16820193278365475 0.0007088331515812432 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 111605 10281 TLNNDIM[Oxidation]LIK True H1975_Epitope_Rep3 1189.6376598937302 1189.63656993586 44.597 2 0.16820036665292049 0.0007088331515812432 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 73635 17866 NGISDLVKV True PC9_epitope_Rep2 943.53384606775 943.53274993586 74.024 2 0.16819994834259627 0.0007088331515812432 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 136519 7537 YHNPTANSF True PC9_epitope_Rep4 1049.45665837621 1049.45556993586 36.36 2 0.16818930717356165 0.0007088331515812432 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 7548 18564 ASFNDTFVHV True PC9_epitope_Rep1 1135.5298233164701 1135.52927496793 76.194 1 0.16818277923618283 0.0007088331515812432 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 96275 5412 SEESARLVAA True H1975_Epitope_Rep3 1031.5247379360299 1031.52364993586 25.879 2 0.1681789704736897 0.0007088331515812432 0.9438714419765777 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B'] 138365 14283 YRDGLVEQL True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 60.204 2 0.16817832918875006 0.0007088331515812432 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF'] 91770 10894 RPKPSSSPVIF True PC9_epitope_Rep5 1213.68190728377 1213.68025490379 46.892 3 0.16817559136204938 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 140392 18089 YYEYNHDLF True PC9_epitope_Rep2 1262.5244035828598 1262.5233099358602 74.881 2 0.16817461137377823 0.0007088331515812432 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 110873 20593 TLADVLYHV True PC9_epitope_Rep5 1029.54949613189 1029.54838993586 84.257 2 0.1681701353797379 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L', 'ENST00000520079.1_1_8:37996261-37996586:+|nuORF'] 109682 6831 THEEAVTAL True PC9_epitope_Rep6 969.4767251144499 969.47562993586 35.139 2 0.1681559378804042 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 8131 9398 ATETQPIVY True H1975_Epitope_Rep3 1020.5127762699997 1020.51166993586 41.151 2 0.16815000989007176 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 38066 7529 HEMFPAVHA True H1975_Epitope_Rep3 1037.4752856458097 1037.47418993586 33.943 2 0.16814590620280204 0.0007088331515812432 0.9438714419765777 ['ENSG00000113638|ENST00000337702|TTC33'] 73746 8528 NHANGLTL True PC9_epitope_Rep5 838.4297153523801 838.42860993586 37.745 2 0.16814313432856418 0.0007088331515812432 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 105172 5519 STMSTNGIPR True NCI_RA007_Epitope_Rep5 1062.51279335334 1062.5116899358602 27.916 2 0.16814060142146356 0.0007088331515812432 0.9438714419765777 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 87721 11598 QVEEIFNLK True NCI_RA007_Epitope_Rep4 1118.5971746003 1118.5960699358602 51.559 2 0.16813385432593403 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 53739 11941 KYEELQIT True PC9_epitope_Rep5 1022.5284263341399 1022.5273299358599 50.928 2 0.16813303491891904 0.0007088331515812432 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 8274 8503 ATIRVLEAIQK True NCI_RA007_Epitope_Rep3 1240.7503211967598 1240.74868490379 40.521 3 0.16813079678886747 0.0007088331515812432 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A'] 131702 17750 VWSDVTPLTF True NCI_RA007_Epitope_Rep3 1163.58627556343 1163.5851699358602 77.826 2 0.16813063349597165 0.0007088331515812432 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 5235 12396 ALQEMVHQV True PC9_epitope_Rep5 1053.52771514149 1053.52660993586 52.678 2 0.1681296488470849 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 106030 20537 SVLNVLHSL True PC9_epitope_Rep5 980.5654805492 980.56438993586 84.039 2 0.16812486500488502 0.0007088331515812432 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 102017 5141 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 24.081 2 0.1681237127378309 0.0007088331515812432 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 106024 13092 SVLNLVIVK True NCI_RA007_Epitope_Rep5 983.6379172134699 983.63682993586 57.038 2 0.1681217498644317 0.0007088331515812432 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 17343 9640 EHDPVGQMV True PC9_epitope_Rep2 1010.44913046762 1010.44802993586 42.421 2 0.16811885626269052 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 70548 15515 LYVGKTSLI True PC9_epitope_Rep2 992.59063266788 992.58952993586 64.954 2 0.16811415622273113 0.0007088331515812432 0.9438714419765777 ['ENSG00000100228|ENST00000263116|RAB36'] 128679 12385 VSMLNVYLK True NCI_RA007_Epitope_Rep4 1065.58925276889 1065.5881499358602 54.635 2 0.16811216095028578 0.0007088331515812432 0.9438714419765777 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 84191 5792 QESTVIRAP True NCI_RA007_Epitope_Rep3 999.5349086969098 999.53380993586 29.76 2 0.1681114985762958 0.0007088331515812432 0.9438714419765777 ['ENSG00000128849|ENST00000281282|CGNL1'] 110972 8555 TLDDESLKY True H1975_Epitope_Rep1 1082.5131701928199 1082.5120699358602 37.833 2 0.16809176854235658 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 116576 13548 TYGEIFEKF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.5429699358601 59.318 2 0.16808830249433518 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 70963 4088 MENRPSVQA True H1975_Epitope_Rep2 1030.4865786054997 1030.4854899358602 20.815 2 0.1680756091266127 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 14893 15551 DYKESFNTI True PC9_epitope_Rep1 1115.5135045459901 1115.5124099358602 64.64 2 0.16806994369258685 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 86693 14819 QRIDEFESM True PC9_epitope_Rep1 1153.5073736197298 1153.50626993586 61.822 2 0.16806083790045223 0.0007088331515812432 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 132594 11504 VYPPPHQVF True PC9_epitope_Rep4 1082.5549158654999 1082.55380993586 52.012 2 0.16805200490661765 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 94665 7556 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.6154299358602 36.844 2 0.16804729876715016 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 44887 20939 IQDEEFYTL True PC9_epitope_Rep3 1156.5288202569598 1156.5277299358602 85.819 2 0.1680447817175869 0.0007088331515812432 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 107106 20726 SYMGHFDLL True PC9_epitope_Rep1 1081.49026700361 1081.48967496793 84.547 1 0.16804272787400845 0.0007088331515812432 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 8144 6236 ATFGTQVVEK True NCI_RA007_Epitope_Rep3 1078.56587447202 1078.56476993586 31.534 2 0.16803794216822765 0.0007088331515812432 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'C3|p.K263Rfs*40|2|0.22|ENSG00000125730|chr19:6713497-6713497|C/-|frameshift_variant'] 27805 10662 FQESSVKEL True PC9_epitope_Rep1 1065.5342399905699 1065.5331499358601 45.902 2 0.1680347158017737 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 70341 22020 LYPQFMFHL True PC9_epitope_Rep3 1194.5895871220598 1194.58848993586 89.999 2 0.16803385821032982 0.0007088331515812432 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 60643 7773 LITLEEEM[Oxidation]TK True H1975_Epitope_Rep1 1221.61625574281 1221.61514993586 34.854 2 0.16803355180363316 0.0007088331515812432 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 11891 16393 DHQLIQEAL True PC9_epitope_Rep5 1065.54547338061 1065.54436993586 68.054 2 0.16803251840854827 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 54224 21689 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61098993586 88.255 2 0.16802902149034502 0.0007088331515812432 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 6354 5100 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 27.294 2 0.16802370700676467 0.0007088331515812432 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 44886 20743 IQDEEFYTL True PC9_epitope_Rep2 1156.5288202569598 1156.5277299358602 85.228 2 0.16802193390800574 0.0007088331515812432 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 27829 19924 FQIVNPHLL True PC9_epitope_Rep2 1079.61276509479 1079.6116699358602 82.035 2 0.16801121243452552 0.0007088331515812432 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 138200 11454 YQRLSTETL True PC9_epitope_Rep5 1109.57168812845 1109.5705899358602 49.055 2 0.1680071712627138 0.0007088331515812432 0.9438714419765777 ['ENSG00000088038|ENST00000221232|CNOT3'] 8111 3399 ATEQPLTAK True NCI_RA007_Epitope_Rep4 957.5131106231698 957.51200993586 18.932 2 0.1679945784090784 0.0007088331515812432 0.9438714419765777 ['ENSG00000120725|ENST00000394817|SIL1'] 98553 15117 SILSNIHEV True PC9_epitope_Rep4 1010.53965972418 1010.53856993586 66.076 2 0.16799214980522933 0.0007088331515812432 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1', 'ABCA1|p.Q1986E|1|0.35|ENSG00000165029|chr9:104788539-104788539|G/C|missense_variant'] 136907 13008 YKDGTELEL True PC9_epitope_Rep2 1066.51825557326 1066.51714993586 55.32 2 0.1679862757588849 0.0007088331515812432 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 88459 15365 QYVSAFSKL True PC9_epitope_Rep2 1041.54949613189 1041.54838993586 64.383 2 0.16798536689891128 0.0007088331515812432 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 27726 13818 FQDPYTRSL True PC9_epitope_Rep2 1125.54547338061 1125.54436993586 58.433 2 0.16798245848766263 0.0007088331515812432 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 21082 10314 ERDPATYNI True PC9_epitope_Rep3 1077.5090878718902 1077.50798993586 44.618 2 0.1679819290700905 0.0007088331515812432 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 14017 20923 DRYQYPFVL True PC9_epitope_Rep2 1199.5975089534697 1199.59640993586 85.926 2 0.16798154302100693 0.0007088331515812432 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2', 'SGPP2|p.M182I|1|0.33|ENSG00000163082|chr2:222521934-222521934|G/A|missense_variant'] 40295 10323 HRQEIQVVL True PC9_epitope_Rep4 1120.63529144452 1120.6341899358601 47.398 2 0.16797408385728374 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 60179 13668 LHYPSTTAL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 57.599 2 0.16796857743525162 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 89054 9912 REEFPTLQAA True H1975_Epitope_Rep2 1160.5825871653199 1160.5814899358602 43.115 2 0.16796756716047506 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 90349 16903 RIIDVVYNA True PC9_epitope_Rep5 1061.58694426977 1061.58584993586 70.032 2 0.1679660822628364 0.0007088331515812432 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 77014 19500 NVVDVFHAV True PC9_epitope_Rep1 998.51853035678 998.51742993586 79.825 2 0.16796476416064288 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 84639 14894 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.51274993586 62.11 2 0.16795691235381283 0.0007088331515812432 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 73896 4564 NHHLQETSF True PC9_epitope_Rep6 1111.50467119779 1111.50356993586 24.816 2 0.16794829830569596 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 74545 12976 NLAENISRV True PC9_epitope_Rep5 1014.54580773378 1014.5447099358599 54.921 2 0.1679479432634281 0.0007088331515812432 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 11741 13634 DHHENKYLLL True PC9_epitope_Rep1 1280.65133543148 1280.6496749037901 57.299 3 0.16794355070257758 0.0007088331515812432 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 61437 9076 LLEVLSQK True H1975_Epitope_Rep1 928.5593325396 928.55822993586 39.815 2 0.16794320524918738 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 109518 16318 THADYVLEM True PC9_epitope_Rep1 1077.48009624273 1077.47898993586 67.585 2 0.16793680613243675 0.0007088331515812432 0.9438714419765777 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 14984 20967 DYSSILQKF True PC9_epitope_Rep5 1099.55497543515 1099.55447496793 85.711 1 0.16792975043952996 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 24726 12112 FAYDGKDYL True NCI_RA007_Epitope_Rep1 1090.4971262058598 1090.4960299358602 51.102 2 0.1679280384176213 0.0007088331515812432 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 7399 5146 ASAIPAYSK True NCI_RA007_Epitope_Rep4 906.4810822189 906.47998993586 26.318 2 0.16792717085683964 0.0007088331515812432 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1'] 95985 12109 SEAEIFYNA True H1975_Epitope_Rep3 1042.46074069714 1042.4596499358602 51.742 2 0.16792531593852947 0.0007088331515812432 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 74124 12515 NHVTPPNVSL True PC9_epitope_Rep5 1076.56145779792 1076.56036993586 53.138 2 0.16792250487350704 0.0007088331515812432 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 86651 17841 QRGEFVVSL True PC9_epitope_Rep5 1033.55564414149 1033.5545499358602 73.643 2 0.16791820452219938 0.0007088331515812432 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57'] 91146 15364 RLPEIYIQL True NCI_RA007_Epitope_Rep4 1143.66519459047 1143.6640899358601 66.767 2 0.1679161367165327 0.0007088331515812432 0.9438714419765777 ['EHD4|p.I335M|1|0.07|ENSG00000103966|chr15:41909783-41909783|G/C|missense_variant', 'ENSG00000103966|ENST00000220325|EHD4'] 57027 4866 LEEERTPTP True H1975_Epitope_Rep2 1070.52440358286 1070.5233099358602 23.804 2 0.16791468241951488 0.0007088331515812432 0.9438714419765777 ['ENSG00000086504|ENST00000199706|MRPL28', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 114146 9084 TRSPVKVTL True PC9_epitope_Rep1 999.60767971435 999.60658993586 39.794 2 0.1678963020574744 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 27818 17073 FQHIDFVTA True PC9_epitope_Rep2 1076.52909504048 1076.5279899358602 70.923 2 0.16788794969577453 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44', 'nc|ENSG00000131725|Q5JSH3-3|WDR44'] 130479 15214 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 70.616 2 0.16787743786640796 0.0007088331515812432 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 129289 4921 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 24.011 3 0.1678611716050136 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 39349 5391 HLTGEFEK True PC9_epitope_Rep5 959.47124581119 959.47014993586 25.749 2 0.16786106337722195 0.0007088331515812432 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000541630.5_1_12:131357386-131357560:+|nuORF', 'ENST00000464211.6_1_12:131357386-131359105:+|nuORF', 'ENST00000537745.5_1_12:131357386-131357560:+|nuORF'] 61868 11340 LLLEPYNKY True H1975_Epitope_Rep2 1151.62266107215 1151.6215699358602 48.668 2 0.16785717578393103 0.0007088331515812432 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 91495 6659 RNVSTGDVNVE True PC9_epitope_Rep3 1188.5734790335998 1188.5723899358602 30.638 2 0.1678466517036025 0.0007088331515812432 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 40252 20299 HRIYVPLML True PC9_epitope_Rep1 1140.6477707045199 1140.64666993586 82.909 2 0.16784130245261866 0.0007088331515812432 0.9438714419765777 ['ENSG00000140526|ENST00000352732|ABHD2', 'ENST00000568308.1_1_15:89728670-89736600:+|nuORF'] 4119 8745 AHTAEVNCL True PC9_epitope_Rep5 956.43856578392 956.43746993586 38.58 2 0.16783711613493735 0.0007088331515812432 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 94621 19837 RYLDEINLL True PC9_epitope_Rep4 1147.62372370131 1147.62262993586 84.434 2 0.16783130746346828 0.0007088331515812432 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 26256 17776 FIAKSFYDL True PC9_epitope_Rep6 1102.5698972233 1102.5688099358601 81.01 2 0.16782431565491937 0.0007088331515812432 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 40733 11395 HTVEDLVKV True PC9_epitope_Rep4 1038.5709598524597 1038.5698699358602 51.601 2 0.1678239439969148 0.0007088331515812432 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 70356 22434 LYPSIIQEF True PC9_epitope_Rep5 1108.580461907 1108.57987496793 91.291 1 0.16781783678920328 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 46252 5497 ITDTTRDVY True H1975_Epitope_Rep2 1082.52440358286 1082.5233099358602 26.157 2 0.16780994105493013 0.0007088331515812432 0.9438714419765777 ['ENSG00000161904|ENST00000293760|LEMD2'] 139188 7202 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.4183249679301 32.638 1 0.16780277920034606 0.0007088331515812432 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 7924 10149 ATDDSLYY True H1975_Epitope_Rep2 946.39199243098 946.39144496793 44.037 1 0.16780202293855617 0.0007088331515812432 0.9438714419765777 ['ENSG00000149260|ENST00000648180|CAPN5'] 41226 17196 IADSNYNWFY True H1975_Epitope_Rep2 1291.55095268387 1291.54984993586 71.433 2 0.1677929565452156 0.0007088331515812432 0.9438714419765777 ['ENSG00000171451|ENST00000310045|DSEL', 'DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 8859 12805 AVFPSIVGRPR True PC9_epitope_Rep2 1197.69822605425 1197.6965849037902 54.556 3 0.1677905645260182 0.0007088331515812432 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77249 19172 NYINDLRNF True PC9_epitope_Rep2 1167.56727145435 1167.5661699358602 79.117 2 0.16779048993982973 0.0007088331515812432 0.9438714419765777 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 102905 17162 SQIEADFRL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 74.018 2 0.16778855972203555 0.0007088331515812432 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 138731 7181 YSADREDLY True H1975_Epitope_Rep2 1130.48801807414 1130.4869299358602 32.555 2 0.16778088899065868 0.0007088331515812432 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 38744 7807 HHTTQQTFL True PC9_epitope_Rep5 1111.54105670651 1111.53994993586 34.973 2 0.16777195471435905 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 117844 9821 VAPEEHPVLL True H1975_Epitope_Rep2 1102.60225998074 1102.60116993586 42.76 2 0.16776686528946708 0.0007088331515812432 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 7274 9607 ARPPGYEF True PC9_epitope_Rep4 935.45011644379 935.44900993586 44.577 2 0.167764340269893 0.0007088331515812432 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 26300 3508 FIDSDHTDNQR True NCI_RA007_Epitope_Rep2 1346.5851063464602 1346.5834649037902 18.297 3 0.16774859740234416 0.0007088331515812432 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 113633 13083 TRDAGYGGLSL True PC9_epitope_Rep6 1108.5512870370399 1108.55018993586 61.931 2 0.1677449167799014 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 17558 11709 EHITSEYTL True PC9_epitope_Rep4 1091.5135045459901 1091.5124099358602 52.801 2 0.16774120176696738 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000179094|O15534-4|PER1', 'ENSG00000179094|ENST00000317276|PER1', 'ENST00000579065.1_1_17:8052750-8054072:-|nuORF'] 25217 9690 FEAPATINSA True H1975_Epitope_Rep1 1019.49237517859 1019.49126993586 42.197 2 0.16774014200333248 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 105443 15703 SVAQDIPKL True PC9_epitope_Rep1 969.5494961318899 969.54838993586 65.224 2 0.1677295316834107 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 11673 11270 DHDITSQL True PC9_epitope_Rep5 927.42977492203 927.42866993586 48.342 2 0.1677290121441151 0.0007088331515812432 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 29407 21842 FVFPGELLL True H1975_Epitope_Rep2 1033.5848190114498 1033.5837299358602 90.323 2 0.16772383080217337 0.0007088331515812432 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 103666 13656 SRDPNYLNL True PC9_epitope_Rep4 1090.54072235334 1090.5396299358601 60.419 2 0.16771901288077204 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 1116 5866 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44286993586 27.549 2 0.16771742952707439 0.0007088331515812432 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 47413 9277 IYIKQIKTF True NCI_RA007_Epitope_Rep1 1152.6906810623198 1152.6890249037901 40.084 3 0.16770927292791668 0.0007088331515812432 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 87636 4734 QTYSTEPNNLK True NCI_RA007_Epitope_Rep5 1293.62009487285 1293.61898993586 24.894 2 0.1677046349836873 0.0007088331515812432 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 90594 4147 RKIKVSNTL True NCI_RA007_Epitope_Rep4 1057.66077791637 1057.6596899358601 22.245 2 0.16769972344151685 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000131100|P36543-3|ATP6V1E1', 'nc|ENSG00000131100|P36543-2|ATP6V1E1', 'ENSG00000131100|ENST00000253413|ATP6V1E1'] 105555 10186 SVDSHFQEV True PC9_epitope_Rep1 1046.4668887067398 1046.4657899358601 44.059 2 0.16769824085334586 0.0007088331515812432 0.9438714419765777 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 48428 13050 KEEDVLKFLAA True H1975_Epitope_Rep2 1261.69180326113 1261.69015490379 55.319 3 0.16769458819378932 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 29812 20751 FVVDEVHLI True PC9_epitope_Rep1 1069.5807962601698 1069.5796899358602 84.646 2 0.16769217896660987 0.0007088331515812432 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 5344 5901 ALSTPVVEK True NCI_RA007_Epitope_Rep4 942.53859709502 942.53750993586 29.322 2 0.16768292554824935 0.0007088331515812432 0.9438714419765777 ['ENSG00000197265|ENST00000355904|GTF2E2'] 13888 6585 DRDPASGTAL True PC9_epitope_Rep4 1001.47778774361 1001.47668993586 32.486 2 0.16768119846175067 0.0007088331515812432 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 28948 8964 FTEQYNEQY True H1975_Epitope_Rep1 1220.4985827578398 1220.4974899358601 39.384 2 0.16767708095378592 0.0007088331515812432 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 118993 16449 VEFLEPLEA True H1975_Epitope_Rep1 1045.5331773614098 1045.53208993586 68.634 2 0.1676645511124264 0.0007088331515812432 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 87943 4936 QVQAAQFAK True NCI_RA007_Epitope_Rep4 989.5294293936498 989.52832993586 25.448 2 0.16766332961881425 0.0007088331515812432 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1'] 88460 16433 QYVSAFSKL True PC9_epitope_Rep3 1041.54949613189 1041.54838993586 68.348 2 0.16766321893451638 0.0007088331515812432 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 138245 19899 YQTPRLWLF True PC9_epitope_Rep6 1222.6498788795 1222.6487899358601 89.197 2 0.16765107681383715 0.0007088331515812432 0.9438714419765777 ['ENST00000467275.1_1_3:112256557-112257010:-|nuORF', 'nc|ENSG00000144848|Q9NT62-2|ATG3', 'ENSG00000144848|ENST00000283290|ATG3', 'ENST00000495756.5_1_3:112255248-112280627:-|nuORF'] 28388 11538 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44364993586 49.364 2 0.16763690061369552 0.0007088331515812432 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 24143 13961 EYSRFVNQI True PC9_epitope_Rep2 1154.5720224816198 1154.57092993586 58.976 2 0.16761974861255421 0.0007088331515812432 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'ENST00000483237.1_1_1:155891178-155891799:-|nuORF', 'ENST00000478002.5_1_1:155885750-155895538:-|nuORF', 'nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 84578 15510 QHDFTSQIF True PC9_epitope_Rep6 1121.51417325233 1121.5130699358601 71.837 2 0.1676183138951805 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 47557 23301 IYMDTLNIF True PC9_epitope_Rep1 1128.5525329069999 1128.5514299358601 94.415 2 0.16761818777453175 0.0007088331515812432 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 64581 12358 LRDSFQQVV True PC9_epitope_Rep4 1090.57710786206 1090.5760099358602 55.341 2 0.16761764122853626 0.0007088331515812432 0.9438714419765777 ['ARNT|p.R595Pfs*9|1|0.14|ENSG00000143437|chr1:150816806-150816807|-/G|frameshift_variant', 'nc|ENSG00000143437|P27540-2|ARNT', 'nc|ENSG00000143437|P27540-3|ARNT', 'nc|ENSG00000143437|P27540-4|ARNT', 'ENSG00000143437|ENST00000358595|ARNT'] 37604 9957 GYSFTTTAER True PC9_epitope_Rep5 1131.51965255559 1131.5185499358602 43.275 2 0.16761443993430514 0.0007088331515812432 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 11890 16568 DHQLIQEAL True PC9_epitope_Rep3 1065.54547338061 1065.54436993586 68.868 2 0.1676078083830849 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 139733 19350 YTYEELLNRV True PC9_epitope_Rep4 1298.65066672514 1298.6495699358602 82.539 2 0.16760718426146948 0.0007088331515812432 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 39805 14267 HQELFPHSL True PC9_epitope_Rep1 1106.55089311422 1106.5497899358602 59.701 2 0.16760463500141148 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 107285 18135 SYQKVIELF True PC9_epitope_Rep6 1125.6070110080097 1125.60647496793 82.393 1 0.16760018944286145 0.0007088331515812432 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 97875 16802 SHLDYDITL True PC9_epitope_Rep6 1075.5185899264302 1075.51748993586 77.134 2 0.1675963070827412 0.0007088331515812432 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 1408 10197 AEEFVIVKA True H1975_Epitope_Rep2 1004.5542471591598 1004.55314993586 44.227 2 0.167590659585414 0.0007088331515812432 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.L636V|1|0.18|ENSG00000196455|chr3:130723489-130723489|G/C|missense_variant'] 116684 12427 TYISWKEEL True NCI_RA007_Epitope_Rep5 1167.58119018299 1167.58008993586 54.457 2 0.16758857737274202 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 73557 5843 NFSDNQLQEGK True H1975_Epitope_Rep3 1278.5840437173 1278.5829499358601 27.49 2 0.16758314817627548 0.0007088331515812432 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF'] 57174 5418 LEERYVPRA True H1975_Epitope_Rep2 1131.6036569630699 1131.6020249037902 25.868 3 0.1675749407087989 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 87520 12918 QTHSVFVNV True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 54.561 2 0.16757205189431046 0.0007088331515812432 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 21621 10965 ERSPVIQTL True PC9_epitope_Rep4 1041.58185888933 1041.5807699358602 49.947 2 0.16757142921636925 0.0007088331515812432 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.G10576W|1|0.15|ENSG00000181143|chr19:8939229-8939229|C/A|missense_variant'] 68430 20773 LTTLELLEV True PC9_epitope_Rep6 1029.5957776179698 1029.59468993586 92.667 2 0.1675681830826938 0.0007088331515812432 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 46171 6951 ITDEFVKQKY True H1975_Epitope_Rep2 1269.66050313285 1269.65884490379 31.656 3 0.16756446800743802 0.0007088331515812432 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'ENST00000475183.1_1_X:54953428-54957230:+|nuORF', 'nc|ENSG00000067445|Q12816-5|TRO', 'nc|ENSG00000067445|Q12816-2|TRO', 'ENST00000492706.5_1_X:54953428-54957450:+|nuORF', 'nc|ENSG00000067445|Q12816-3|TRO', 'nc|ENSG00000067445|Q12816-4|TRO', 'ENSG00000067445|ENST00000173898|TRO'] 29231 16830 FVDEPLIHA True PC9_epitope_Rep1 1039.5338460677497 1039.53274993586 69.561 2 0.16756118239837975 0.0007088331515812432 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 76108 6348 NRPGTVSSL True PC9_epitope_Rep3 929.49304388493 929.49194993586 29.445 2 0.16756026652560327 0.0007088331515812432 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 2100 12586 AELNSYVPVTA True H1975_Epitope_Rep2 1162.5870038394198 1162.5859099358602 53.508 2 0.16755707113322987 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 133291 12023 WELVTREVP True H1975_Epitope_Rep3 1127.59750895347 1127.59640993586 51.408 2 0.16755557666900234 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 100480 12145 SLPKGVVEV True PC9_epitope_Rep2 926.54368247546 926.54258993586 52.025 2 0.16754482099641055 0.0007088331515812432 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 105009 3090 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 17.284 3 0.1675405871717693 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 129370 12125 VTEEFQPVY True H1975_Epitope_Rep3 1110.5233409536997 1110.52277496793 51.806 1 0.1675343052068262 0.0007088331515812432 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 6696 10238 AQASDLEKI True PC9_epitope_Rep1 973.50802524273 973.50692993586 44.261 2 0.16752916311780983 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530666.1_1_11:764238-764842:+|nuORF'] 138881 16515 YSDSFPMEL True H1975_Epitope_Rep2 1087.45321278855 1087.45210993586 68.746 2 0.16752909098016278 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 105805 16277 SVINEINKI True PC9_epitope_Rep5 1028.5866099165999 1028.58550993586 67.603 2 0.16752293350126693 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 83014 22625 PYISNIYLI True PC9_epitope_Rep5 1094.60119735158 1094.60010993586 92.026 2 0.16752262316501865 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 127065 18222 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 75.103 2 0.1675221558548045 0.0007088331515812432 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 53085 4363 KSDSGKPYYY True H1975_Epitope_Rep2 1206.55570371114 1206.55460993586 21.896 2 0.1675195417629448 0.0007088331515812432 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000467114.2_1_2:153535806-153549567:-|nuORF'] 18018 14828 EIIDLVLDR True H1975_Epitope_Rep3 1084.61282466444 1084.61172993586 62.417 2 0.16751016886327297 0.0007088331515812432 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 102729 21246 SQDYPTLAF True PC9_epitope_Rep1 1040.48147614172 1040.4803699358602 86.547 2 0.16750918588030728 0.0007088331515812432 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 53464 19136 KVIEINPYL True PC9_epitope_Rep1 1087.62774645259 1087.62664993586 78.399 2 0.16750455367774517 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'PSMB8|p.G115V|1|0.5|ENSG00000204264|chr6:32842735-32842735|C/A|missense_variant', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 135102 12465 YALYDATYETK True PC9_epitope_Rep6 1336.61869789052 1336.6176099358602 59.372 2 0.16749901143979934 0.0007088331515812432 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 53467 17537 KVIEINPYL True PC9_epitope_Rep4 1087.62774645259 1087.62664993586 75.468 2 0.1674983526970036 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'PSMB8|p.G115V|1|0.5|ENSG00000204264|chr6:32842735-32842735|C/A|missense_variant', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 65063 12590 LSDLGISSY True H1975_Epitope_Rep3 953.47057710485 953.47002496793 53.63 1 0.1674933073392271 0.0007088331515812432 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1'] 109035 10173 TEYGIGVSA True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 44.133 1 0.16748850217930075 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 54326 13234 KYQDILNEI True NCI_RA007_Epitope_Rep5 1134.5920892198599 1134.59098993586 57.584 2 0.16748621683670303 0.0007088331515812432 0.9438714419765777 ['ENSG00000145703|ENST00000274364|IQGAP2', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 113837 12753 TREEGTPLTL True PC9_epitope_Rep3 1115.5822528121498 1115.5811499358601 54.073 2 0.16748274793554568 0.0007088331515812432 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 130952 20080 VVISSDGQFAL True PC9_epitope_Rep4 1134.5920892198599 1134.59098993586 85.37 2 0.16748268403949865 0.0007088331515812432 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 103613 16270 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.60010993586 67.72 2 0.1674690557353999 0.0007088331515812432 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 136669 9678 YIDSKFEDY True H1975_Epitope_Rep1 1178.5131701928199 1178.5120699358602 42.151 2 0.16746840525304182 0.0007088331515812432 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF', 'ENST00000428867.1_1_7:45797631-45798728:-|nuORF', 'ENST00000429741.5_1_7:45796578-45798731:-|nuORF', 'ENST00000449219.2_1_1:224190265-224197055:+|nuORF', 'ENST00000489259.5_1_10:38674311-38691690:-|nuORF'] 84834 11746 QHLQATGVSL True PC9_epitope_Rep5 1052.56145779792 1052.56036993586 50.18 2 0.16746576128747387 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 130270 8705 VTSTFIIEK True NCI_RA007_Epitope_Rep5 1036.5804619069997 1036.57936993586 40.15 2 0.1674587505325788 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 107533 11163 TADHNLLLY True H1975_Epitope_Rep2 1058.53965972418 1058.53856993586 47.975 2 0.1674540288962974 0.0007088331515812432 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 31681 6127 GEIESKFNQA True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 28.546 2 0.16745314614298487 0.0007088331515812432 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 54005 10390 KYLEETNSL True PC9_epitope_Rep2 1095.5448046742702 1095.54370993586 45.288 2 0.16745153747410763 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 9758 17647 AYLEAIHNF True PC9_epitope_Rep2 1076.52909504048 1076.5279899358602 73.159 2 0.1674416845862357 0.0007088331515812432 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 110054 16223 THYDHVLIEL True PC9_epitope_Rep4 1238.6295373577398 1238.62789490379 70.344 3 0.16743341896400785 0.0007088331515812432 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 43278 15826 IHDGMNLEL True PC9_epitope_Rep4 1040.49608066004 1040.49498993586 68.798 2 0.1674296710244906 0.0007088331515812432 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 74981 19030 NLVRELLAV True PC9_epitope_Rep6 1025.6233297784897 1025.62222993586 85.841 2 0.16742882128064998 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 93785 18763 RTVELFYDV True PC9_epitope_Rep4 1140.5815245361598 1140.5804299358601 80.255 2 0.1674269662913331 0.0007088331515812432 0.9438714419765777 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF', 'ENST00000489654.1_1_7:142960606-142961286:+|nuORF', 'ENST00000473649.1_1_7:142960606-142961786:+|nuORF', 'nc|ENSG00000197448|Q9Y2Q3-4|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-3|GSTK1', 'ENSG00000197448|ENST00000358406|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-2|GSTK1'] 9569 19256 AYANIISQF True PC9_epitope_Rep6 1025.5181960036098 1025.51767496793 86.718 1 0.16742527140621485 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 138789 16905 YSDEFGNLDF True H1975_Epitope_Rep2 1205.4876837209702 1205.4871749679298 70.272 1 0.16741745179614684 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 124681 20743 VLIPKLPQL True PC9_epitope_Rep5 1019.6743027221899 1019.67320993586 84.848 2 0.16740954307779515 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 84594 17229 QHDPETSVLVL True PC9_epitope_Rep2 1236.635016661 1236.6339099358602 71.532 2 0.16740851128612375 0.0007088331515812432 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 103940 17842 SRPPLLGF True PC9_epitope_Rep2 885.50723739709 885.50614993586 73.929 2 0.16740733939377075 0.0007088331515812432 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 109960 7656 THSLETQEL True PC9_epitope_Rep4 1056.5087535187201 1056.5076499358602 36.831 2 0.16740337134662772 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 96625 4932 SENEYIM[Oxidation]KA True H1975_Epitope_Rep2 1099.4855759264299 1099.48446993586 24.053 2 0.1674020481623124 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 98756 20629 SISDVIAQV True PC9_epitope_Rep2 930.5022115863 930.50110993586 84.783 2 0.16740040926717797 0.0007088331515812432 0.9438714419765777 ['ENSG00000154122|ENST00000284268|ANKH'] 88135 21275 QWPPDPPLHF True PC9_epitope_Rep1 1232.59784330664 1232.59674993586 86.66 2 0.16739159866173922 0.0007088331515812432 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 98009 10021 SHSSFQASL True PC9_epitope_Rep3 962.44575933934 962.44466993586 43.502 2 0.16738945289598692 0.0007088331515812432 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 93672 6740 RTIAPIIGR True NCI_RA007_Epitope_Rep4 995.6239984848298 995.62290993586 32.546 2 0.16738694006543495 0.0007088331515812432 0.9438714419765777 ['ENSG00000096401|ENST00000371477|CDC5L'] 117002 10465 TYQDIQNTI True NCI_RA007_Epitope_Rep3 1094.52440358286 1094.5233099358602 48.228 2 0.16738634937069138 0.0007088331515812432 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 77460 15753 NYPETLGRLLI True NCI_RA007_Epitope_Rep1 1287.7186867153098 1287.7175899358601 65.372 2 0.16738563642108892 0.0007088331515812432 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 83867 11194 QEHPVVLLP True H1975_Epitope_Rep2 1030.5811306133398 1030.58002993586 48.097 2 0.16738277156630277 0.0007088331515812432 0.9438714419765777 ['ENSG00000116906|ENST00000366647|GNPAT', 'nc|ENSG00000116906|O15228-2|GNPAT'] 95361 14147 SAHLFEVEL True NCI_RA007_Epitope_Rep4 1043.52876068731 1043.52766993586 61.696 2 0.1673774948348129 0.0007088331515812432 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 132156 10450 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 45.134 3 0.1673755753735273 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 93784 19479 RTVELFYDV True PC9_epitope_Rep2 1140.5815245361598 1140.5804299358601 80.305 2 0.16737245765411846 0.0007088331515812432 0.9438714419765777 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF', 'ENST00000489654.1_1_7:142960606-142961286:+|nuORF', 'ENST00000473649.1_1_7:142960606-142961786:+|nuORF', 'nc|ENSG00000197448|Q9Y2Q3-4|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-3|GSTK1', 'ENSG00000197448|ENST00000358406|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-2|GSTK1'] 94593 18525 RYKLYQEMF True PC9_epitope_Rep1 1276.6274291827597 1276.62577490379 76.045 3 0.1673716763996033 0.0007088331515812432 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 104131 6963 SRYSSTETL True PC9_epitope_Rep5 1042.49310345458 1042.49200993586 31.751 2 0.1673692004894588 0.0007088331515812432 0.9438714419765777 ['ARHGEF17|p.G618Wfs*4|1|0.39|ENSG00000110237|chr11:73310481-73310482|-/C|frameshift_variant', 'ENSG00000110237|ENST00000263674|ARHGEF17'] 136555 14425 YHSEVPVSL True PC9_epitope_Rep5 1029.51311062317 1029.51200993586 60.485 2 0.16736401141141183 0.0007088331515812432 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 2811 5666 AEVETRIEA True H1975_Epitope_Rep1 1016.5138388991599 1016.51274993586 26.864 2 0.16736300528360548 0.0007088331515812432 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 3987 20550 AHFPINVVI True PC9_epitope_Rep1 1008.5756513100799 1008.57507496793 83.857 1 0.16735748460321245 0.0007088331515812432 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 133216 7235 WEDEGVRAC True H1975_Epitope_Rep2 1063.4392940599098 1063.43818993586 32.763 2 0.16734527924810608 0.0007088331515812432 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 129366 12218 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.52277496793 52.079 1 0.16734033879499197 0.0007088331515812432 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 14380 17076 DTEPPPLLVY True H1975_Epitope_Rep1 1142.5859412102598 1142.5848499358601 71.108 2 0.1673380546059581 0.0007088331515812432 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 94972 20486 RYPTSIASLAF True PC9_epitope_Rep3 1224.65027280232 1224.64916993586 84.058 2 0.16733263968789688 0.0007088331515812432 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 9248 6122 AVQQPFINK True NCI_RA007_Epitope_Rep3 1043.5763795860698 1043.5752899358602 31.069 2 0.16732799994075664 0.0007088331515812432 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 2388 11633 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.50618993586 49.815 2 0.16732529305407765 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 9767 18345 AYLEAIHNF True PC9_epitope_Rep5 1076.52909504048 1076.5279899358602 75.58 2 0.1673145639714264 0.0007088331515812432 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 76046 9745 NRLENDGATAL True PC9_epitope_Rep1 1172.5785644140399 1172.57746993586 42.344 2 0.16731346786958443 0.0007088331515812432 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 54128 11970 KYNANFVTF True NCI_RA007_Epitope_Rep2 1102.54474510462 1102.54364993586 51.157 2 0.1673126166945925 0.0007088331515812432 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 2202 14476 AENPDIFAV True H1975_Epitope_Rep2 974.4709114580199 974.46980993586 60.839 2 0.1673079268674833 0.0007088331515812432 0.9438714419765777 ['ENSG00000139514|ENST00000380752|SLC7A1'] 96043 5260 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 25.301 2 0.1673016225457231 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 12639 8616 DLEGLSQR True PC9_epitope_Rep2 916.46140940348 916.46030993586 38.503 2 0.16729014429571368 0.0007088331515812432 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 48718 6648 KENEGFTVTA True H1975_Epitope_Rep2 1094.52440358286 1094.5233099358602 30.479 2 0.1672858799089682 0.0007088331515812432 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3'] 113518 9931 TQTAVITRI True PC9_epitope_Rep4 1001.5869442697699 1001.58584993586 45.851 2 0.16728279607463228 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 103564 19821 SRDELLQVL True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 81.287 2 0.1672788153925326 0.0007088331515812432 0.9438714419765777 ['ENSG00000187446|ENST00000334660|CHP1', 'ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'CHP1|p.R140L|1|0.6|ENSG00000187446|chr15:41278774-41278774|G/T|missense_variant'] 114831 11999 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.49807496793 51.161 1 0.16727366540684 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 70402 22966 LYQFNPAFF True PC9_epitope_Rep5 1145.5545815123298 1145.5540749679299 93.328 1 0.16726645716130947 0.0007088331515812432 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 113592 9242 TRAGPGTLSV True PC9_epitope_Rep3 957.52434401321 957.52324993586 40.492 2 0.1672650026578716 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 775 8652 AAYEHFETM True NCI_RA007_Epitope_Rep3 1097.4487961144498 1097.4476899358601 41.112 2 0.1672414476469316 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 77163 20585 NYFIPSHYF True PC9_epitope_Rep5 1186.54474510462 1186.54364993586 84.228 2 0.167237974415596 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'nc|ENSG00000146414|Q149N8-2|SHPRH', 'SHPRH|p.R1289Lfs*8|1|0.16|ENSG00000146414|chr6:145921309-145921310|-/A|frameshift_variant', 'nc|ENSG00000146414|Q149N8-5|SHPRH'] 77115 16850 NYAQVLDKF True PC9_epitope_Rep6 1096.5553097883198 1096.5542099358602 77.329 2 0.16723260510448615 0.0007088331515812432 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant', 'ENST00000519169.5_1_8:131191508-131249207:-|nuORF'] 1847 9758 AEIEETLQA True H1975_Epitope_Rep1 1002.4869554449798 1002.48584993586 42.464 2 0.16723086595932565 0.0007088331515812432 0.9438714419765777 ['ENSG00000176903|ENST00000316836|PNMA1'] 4699 12537 ALDLEIATYR True NCI_RA007_Epitope_Rep1 1163.6186383208699 1163.61807496793 52.745 1 0.16722767359571375 0.0007088331515812432 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 115447 22845 TVFLYFESV True PC9_epitope_Rep2 1103.55391280599 1103.55280993586 93.364 2 0.1672128887016152 0.0007088331515812432 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 75047 7678 NMEADPGQY True H1975_Epitope_Rep2 1023.3967605415899 1023.39617496793 34.486 1 0.16720884395471308 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 114051 15704 TRNDYVMMY True PC9_epitope_Rep5 1191.50526544475 1191.50416993586 65.41 2 0.16720871482946756 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 138578 19272 YRPPELLL True PC9_epitope_Rep2 999.5753169569099 999.57420993586 79.503 2 0.1672048269130622 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 87044 7201 QSDPTQSGMY True H1975_Epitope_Rep2 1112.44443901 1112.44387496793 32.634 1 0.16720422429098286 0.0007088331515812432 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 131803 10905 VYANGIRNI True PC9_epitope_Rep5 1018.5559784946599 1018.55488993586 46.933 2 0.1672028556486164 0.0007088331515812432 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 126345 9749 VPKNSDPWAA True PC9_epitope_Rep5 1083.53490869691 1083.53380993586 42.47 2 0.16720091849712937 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 75869 13179 NRDNVGLVL True PC9_epitope_Rep4 998.5508931142199 998.54978993586 58.591 2 0.1672001454583008 0.0007088331515812432 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 104395 3725 SSGVPNPPK True NCI_RA007_Epitope_Rep4 881.4606811274899 881.45958993586 20.467 2 0.16719956174422437 0.0007088331515812432 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2'] 7118 5235 AQYEEIAQR True H1975_Epitope_Rep2 1106.5356369728997 1106.53452993586 25.204 2 0.16719790667415038 0.0007088331515812432 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6C|p.R349Q|1|0.16|ENSG00000170465|chr12:52471163-52471163|C/T|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 137147 12362 YLDPAQQNLY True H1975_Epitope_Rep1 1223.5822528121503 1223.5811499358601 52.581 2 0.16719754742909443 0.0007088331515812432 0.9438714419765777 ['ENST00000421406.1_1_1:247353282-247372753:-|nuORF'] 77271 15384 NYIRITSEI True PC9_epitope_Rep4 1107.59242357303 1107.5913299358601 67.106 2 0.16719730358379292 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 67253 13077 LTDLVPNTEY True H1975_Epitope_Rep2 1163.57101942211 1163.56992993586 55.423 2 0.16719384764108067 0.0007088331515812432 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 72630 11062 MVVQDGIVKA True PC9_epitope_Rep4 1058.57941636118 1058.57830993586 50.326 2 0.16718738354667087 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 95103 14402 RYTLQASTF True PC9_epitope_Rep1 1085.5505587610498 1085.54946993586 60.221 2 0.16718724439202484 0.0007088331515812432 0.9438714419765777 ['ENSG00000055130|ENST00000325222|CUL1'] 99177 20229 SLAQYLINV True PC9_epitope_Rep6 1019.5651461960299 1019.5645749679301 90.494 1 0.16718587579000319 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 8082 13659 ATEFIMNEY True H1975_Epitope_Rep3 1116.47976188956 1116.4786699358601 57.83 2 0.1671836157856598 0.0007088331515812432 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 28346 10875 FSDETNTENLY True H1975_Epitope_Rep2 1331.55174052951 1331.55064993586 46.861 2 0.1671781439251487 0.0007088331515812432 0.9438714419765777 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4'] 77616 16007 NYVEKGFQI True PC9_epitope_Rep5 1096.5553097883198 1096.5542099358602 66.562 2 0.16717535439905964 0.0007088331515812432 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 116830 14429 TYMGHTGAVW True PC9_epitope_Rep5 1121.4964150132098 1121.4953099358602 60.5 2 0.16717198459094423 0.0007088331515812432 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 21087 10234 ERDPATYNI True PC9_epitope_Rep5 1077.5090878718902 1077.50798993586 44.353 2 0.16717192805119646 0.0007088331515812432 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 46722 4909 IVAGTLTNK True NCI_RA007_Epitope_Rep4 915.53893144819 915.53782993586 25.34 2 0.16717092140749878 0.0007088331515812432 0.9438714419765777 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 117158 10897 TYSTEPNNL True PC9_epitope_Rep1 1037.46655435357 1037.46544993586 46.8 2 0.16716245366426552 0.0007088331515812432 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 54195 16961 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 70.103 2 0.1671513971053938 0.0007088331515812432 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 113629 15128 TRDAGYGGLSL True PC9_epitope_Rep5 1108.5512870370399 1108.55018993586 63.195 2 0.16715106859880244 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 1635 7392 AEFVEVTK True PC9_epitope_Rep6 921.4807478657299 921.47964993586 37.647 2 0.16715056060553937 0.0007088331515812432 0.9438714419765777 ['CON__P02769'] 27381 18438 FMTTNVPNV True PC9_epitope_Rep3 1021.4902670036099 1021.48916993586 76.125 2 0.1671482065559321 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ADD1-FAM193A|4|fusion', 'ADD1-FAM193A|3|fusion', 'ADD1-FAM193A|1|fusion', 'ADD1-FAM193A|2|fusion', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF'] 39124 16398 HLDLGILYY True H1975_Epitope_Rep2 1105.58079626017 1105.5796899358602 68.295 2 0.16714426455591286 0.0007088331515812432 0.9438714419765777 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 24682 8776 FATHAAALSVR True PC9_epitope_Rep5 1142.6196413803798 1142.61799490379 38.699 3 0.16713910936727006 0.0007088331515812432 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 133066 20200 VYWKIYNSI True PC9_epitope_Rep3 1184.6229954253197 1184.62188993586 82.959 2 0.1671272452301838 0.0007088331515812432 0.9438714419765777 ['ENSG00000115524|ENST00000335508|SF3B1'] 12054 10119 DIDTRSEFY True H1975_Epitope_Rep2 1144.5036681382799 1144.50256993586 43.919 2 0.16712420593387217 0.0007088331515812432 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 131057 20577 VVLPLELKL True PC9_epitope_Rep4 1022.6739683690199 1022.6728699358599 87.302 2 0.1671207771887781 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 74580 5808 NLDKNTVGY True H1975_Epitope_Rep2 1022.5032742154599 1022.50216993586 27.331 2 0.16711970869145165 0.0007088331515812432 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion'] 106852 23028 SYIDVLPEF True PC9_epitope_Rep5 1081.53317736141 1081.53208993586 93.569 2 0.16711778227988067 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 9442 6914 AVVTQVNKV True PC9_epitope_Rep3 956.5654805492 956.56438993586 31.607 2 0.1671157377798462 0.0007088331515812432 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 132849 10145 VYTPVASRQSL True PC9_epitope_Rep4 1219.65608645875 1219.6549899358602 46.7 2 0.16711566784124957 0.0007088331515812432 0.9438714419765777 ['ENSG00000070950|ENST00000264926|RAD18', 'RAD18|p.D408Tfs*40|2|0.17|ENSG00000070950|chr3:8898994-8898994|C/-|frameshift_variant', 'RAD18|p.E392Kfs*4|1|0.11|ENSG00000070950|chr3:8899042-8899042|C/-|frameshift_variant'] 104025 14247 SRSPEYLSL True PC9_epitope_Rep2 1050.53457434374 1050.53346993586 60.068 2 0.16711453702509257 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3', 'ENST00000484081.1_1_2:225370642-225376119:-|nuORF'] 21642 9395 ERTNIQVTV True PC9_epitope_Rep4 1058.57202248162 1058.57092993586 43.745 2 0.16710737782966514 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 88426 22236 QYSPLLAAF True PC9_epitope_Rep2 1008.5280324113198 1008.52692993586 91.009 2 0.1670995602429034 0.0007088331515812432 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 11664 11693 DHDIPQQL True PC9_epitope_Rep5 964.46140940348 964.46030993586 49.973 2 0.167099325538582 0.0007088331515812432 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 105821 14825 SVIPQIQKV True PC9_epitope_Rep3 1010.6124307416198 1010.61132993586 62.16 2 0.16709878657133667 0.0007088331515812432 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 132223 8419 VYKPAQNSW True PC9_epitope_Rep4 1091.5399940773498 1091.5388899358602 39.848 2 0.16709586304559193 0.0007088331515812432 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 103659 19592 SRDPIIFSV True PC9_epitope_Rep3 1032.56039516876 1032.55928993586 80.597 2 0.1670937921953135 0.0007088331515812432 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000565049.1_1_16:33499109-33500962:-|nuORF', 'ENST00000554269.1_1_15:20362738-20365460:+|nuORF'] 27342 6448 FM[Oxidation]ETATESLAK True H1975_Epitope_Rep1 1242.58020458726 1242.57910993586 29.864 2 0.16709323320755032 0.0007088331515812432 0.9438714419765777 ['CON__Q58D62'] 40477 10064 HSDVTEAMLY True H1975_Epitope_Rep2 1164.512124647 1164.51102993586 43.703 2 0.16708387157167084 0.0007088331515812432 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 139187 7280 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.41776993586 32.94 2 0.16707850458801118 0.0007088331515812432 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 70345 21078 LYPQFM[Oxidation]FHL True PC9_epitope_Rep2 1210.5845021220598 1210.5834099358601 86.534 2 0.1670761045431145 0.0007088331515812432 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 72280 13551 M[Oxidation]SDSYLPSYY True H1975_Epitope_Rep2 1240.4958062569601 1240.4952749679298 57.261 1 0.16707060715734623 0.0007088331515812432 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 8793 19725 AVFDKTLAEL True PC9_epitope_Rep2 1105.60192562757 1105.60082993586 81.262 2 0.16706059760685052 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 34787 19734 GQTEVFQAL True PC9_epitope_Rep5 991.4974605590297 991.49636993586 80.953 2 0.16706053327291354 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'ENST00000574957.1_1_16:3074279-3075849:+|nuORF', 'ENST00000576143.5_1_16:3074279-3076060:+|nuORF', 'ENST00000571046.1_1_16:3074279-3076290:+|nuORF', 'ENST00000574498.5_1_16:3074279-3076221:+|nuORF'] 93623 6876 RTDPVVADY True H1975_Epitope_Rep3 1034.50327421546 1034.5021699358601 31.407 2 0.16705656565048171 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 13305 11677 DLYLENPEIK True NCI_RA007_Epitope_Rep2 1232.6288686514001 1232.6277699358602 50.016 2 0.1670522423435827 0.0007088331515812432 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 30025 19188 FYHKYFNYL True PC9_epitope_Rep5 1293.61824439805 1293.6171499358602 78.846 2 0.1670518400685846 0.0007088331515812432 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 110458 15283 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.53308993586 63.795 2 0.16704390603443667 0.0007088331515812432 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 103562 19879 SRDELLQVL True PC9_epitope_Rep3 1071.59242357303 1071.5913299358601 81.703 2 0.16704029635078224 0.0007088331515812432 0.9438714419765777 ['ENSG00000187446|ENST00000334660|CHP1', 'ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'CHP1|p.R140L|1|0.6|ENSG00000187446|chr15:41278774-41278774|G/T|missense_variant'] 39680 8907 HPTEDLVVSA True PC9_epitope_Rep6 1066.5294889632999 1066.52838993586 44.225 2 0.16703989844864153 0.0007088331515812432 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 97869 19176 SHLDYDITL True PC9_epitope_Rep3 1075.5185899264302 1075.51748993586 78.979 2 0.16703721939926905 0.0007088331515812432 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 89494 2751 REQPPTGGNLA True H1975_Epitope_Rep2 1138.57308511078 1138.57198993586 14.609 2 0.16703443327754552 0.0007088331515812432 0.9438714419765777 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 14060 10656 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep1 1086.45394144498 1086.45284993586 45.945 2 0.16702157205932833 0.0007088331515812432 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 91876 11276 RPNSLVGITSA True PC9_epitope_Rep2 1113.61422164677 1113.6131299358601 48.699 2 0.16702050854251704 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 21547 14056 ERSDIVVQI True PC9_epitope_Rep4 1057.5767735088898 1057.57566993586 61.976 2 0.16701810873493528 0.0007088331515812432 0.9438714419765777 ['ENSG00000041802|ENST00000265245|LSG1'] 23917 20062 EYNNIFHTF True PC9_epitope_Rep1 1183.52982331647 1183.5287299358602 81.995 2 0.16701797208474284 0.0007088331515812432 0.9438714419765777 ['ENST00000545363.6_1_12:9808558-9809281:+|nuORF'] 75724 8563 NQWDGTQHGV True PC9_epitope_Rep3 1140.49483479008 1140.49372993586 37.89 2 0.16701490896927365 0.0007088331515812432 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 84060 9184 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 40.279 2 0.1670134592519589 0.0007088331515812432 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 86105 11236 QPQPQPYAV True PC9_epitope_Rep2 1026.5134449763398 1026.5123499358601 48.546 2 0.16700778317178583 0.0007088331515812432 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 60305 8603 LIEVDDER True PC9_epitope_Rep3 987.4872897981498 987.48618993586 38.041 2 0.16700659814719881 0.0007088331515812432 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6'] 133532 16548 WHHTFYNEL True PC9_epitope_Rep5 1245.55670677065 1245.5550749037902 68.656 3 0.16699908333277055 0.0007088331515812432 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 54416 8128 KYSLIKGNF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 37.949 2 0.16699370284079973 0.0007088331515812432 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 105661 4742 SVFSDKLHSK True NCI_RA007_Epitope_Rep4 1146.6033226099 1146.60166490379 24.673 3 0.16699333531207847 0.0007088331515812432 0.9438714419765777 ['ENSG00000187257|ENST00000334955|RSBN1L', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L'] 139185 7106 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.4183249679301 32.263 1 0.16698439168384116 0.0007088331515812432 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 114176 6545 TRSTFSTNY True PC9_epitope_Rep6 1075.49343780775 1075.4923499358601 33.855 2 0.166983584517101 0.0007088331515812432 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 71132 19610 METVWTILP True H1975_Epitope_Rep1 1088.55761828744 1088.55707496793 81.639 1 0.16698249804883392 0.0007088331515812432 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 64033 9203 LQDFFNGK True H1975_Epitope_Rep3 967.4763311916299 967.4752299358599 40.391 2 0.16698195557292628 0.0007088331515812432 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 105855 8603 SVIVQPFSK True NCI_RA007_Epitope_Rep3 1003.57023157647 1003.56912993586 40.916 2 0.1669788527380206 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000285253|Q6N043-2|ZNF280D', 'ENSG00000137871|ENST00000267807|ZNF280D', 'nc|ENSG00000285253|Q6N043-3|ZNF280D', 'nc|ENSG00000285253|Q6N043-6|ZNF280D'] 53941 7732 KYISKPENL True PC9_epitope_Rep3 1090.60225998074 1090.60116993586 34.735 2 0.16697854482738395 0.0007088331515812432 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 9561 21101 AYANIISQF True PC9_epitope_Rep2 1025.5181960036098 1025.51767496793 86.624 1 0.1669764681803996 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 94440 21020 RYFLPPYTF True PC9_epitope_Rep2 1202.6124307416196 1202.61132993586 86.306 2 0.16696921657713676 0.0007088331515812432 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 74226 13830 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 58.344 2 0.1669689894868543 0.0007088331515812432 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 65297 5322 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 25.524 3 0.16696547889692057 0.0007088331515812432 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 22255 9095 ETDPQTISAY True H1975_Epitope_Rep1 1123.50333378511 1123.5022299358602 39.889 2 0.16695435634442887 0.0007088331515812432 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 84193 5973 QESTVIRAP True NCI_RA007_Epitope_Rep5 999.5349086969098 999.53380993586 29.659 2 0.16695174542270616 0.0007088331515812432 0.9438714419765777 ['ENSG00000128849|ENST00000281282|CGNL1'] 67220 11490 LTDLEPATEY True H1975_Epitope_Rep3 1150.5393849406598 1150.5382899358601 49.318 2 0.16694654698002026 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 72397 13946 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep1 1136.5423625265598 1136.54126993586 58.799 2 0.1669379581502737 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 30111 19662 FYPPKVELF True PC9_epitope_Rep4 1138.60628273202 1138.6051899358602 83.748 2 0.16693086822023417 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 43568 17234 IIEPSLRQLAQ True PC9_epitope_Rep5 1266.72958575218 1266.7284899358601 71.308 2 0.16692786866185538 0.0007088331515812432 0.9438714419765777 ['ENSG00000221983|ENST00000442744|UBA52'] 76291 13452 NSDVSLLNY True H1975_Epitope_Rep1 1023.48728979815 1023.48677496793 56.859 1 0.16692357197177035 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 94529 18193 RYIFAKNLF True PC9_epitope_Rep2 1170.6549642599398 1170.65386993586 75.286 2 0.16692129669694059 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 72095 15815 MRDPIRILV True PC9_epitope_Rep4 1111.65358436095 1111.65248993586 68.757 2 0.1669196838520117 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 65044 6612 LSDKNIEQY True H1975_Epitope_Rep1 1108.540053647 1108.53894993586 30.489 2 0.16691091537324373 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 91162 16465 RLPETLPSL True PC9_epitope_Rep6 1024.59169529704 1024.5905899358602 75.748 2 0.1669059777854508 0.0007088331515812432 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 31489 12561 GEEMPGLSV True H1975_Epitope_Rep2 917.4164333570099 917.4158849679301 53.411 1 0.16690577823578026 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 4172 5644 AIAQAESLRYK True NCI_RA007_Epitope_Rep5 1248.6826355597598 1248.68098490379 28.398 3 0.16690561899515804 0.0007088331515812432 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 133005 18778 VYVPHIHVW True PC9_epitope_Rep5 1148.6130994479597 1148.61145490379 77.242 3 0.1668894714391495 0.0007088331515812432 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF'] 94634 7130 RYLDKTEQW True NCI_RA007_Epitope_Rep5 1237.6091362663299 1237.60750490379 34.103 3 0.1668829343588131 0.0007088331515812432 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 86013 14589 QPITPGPSI True PC9_epitope_Rep2 908.4967322830399 908.49562993586 61.386 2 0.1668824387228628 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 89399 4926 REMPVKVEA True H1975_Epitope_Rep3 1057.5590152697698 1057.5579099358602 24.074 2 0.16688005289905283 0.0007088331515812432 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 123346 14856 VHYGEVVQL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 62.408 2 0.16686594114955355 0.0007088331515812432 0.9438714419765777 ['ENSG00000127080|ENST00000287996|IPPK'] 114036 10572 TRMSTVSEL True PC9_epitope_Rep3 1022.5066453437399 1022.5055499358599 45.61 2 0.16686376936941136 0.0007088331515812432 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 2993 20032 AFMKGVFTF True PC9_epitope_Rep4 1046.5259242363397 1046.52482993586 85.189 2 0.1668563387430692 0.0007088331515812432 0.9438714419765777 ['ENST00000489739.1_1_9:139685858-139686514:+|nuORF', 'ENST00000465017.5_1_9:139685862-139687281:+|nuORF', 'ENSG00000244187|ENST00000290079|TMEM141'] 21037 10793 ERDAYVQAL True PC9_epitope_Rep4 1063.52982331647 1063.5287299358602 49.275 2 0.1668552981207864 0.0007088331515812432 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 14645 9329 DVNAAIATIK True H1975_Epitope_Rep3 1014.57095985246 1014.5703749679301 40.881 1 0.1668525693043489 0.0007088331515812432 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 42966 6398 IGAEVYHNLK True PC9_epitope_Rep6 1142.60840799034 1142.6067749037902 33.218 3 0.16684687957258976 0.0007088331515812432 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 114205 19909 TRVDTILEF True PC9_epitope_Rep2 1092.5815245361598 1092.5804299358601 81.975 2 0.16683878561313759 0.0007088331515812432 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 136584 20518 YHVDSLLQL True PC9_epitope_Rep5 1086.57095985246 1086.5698699358602 83.964 2 0.16683481350736082 0.0007088331515812432 0.9438714419765777 ['ENSG00000141002|ENST00000263346|TCF25'] 84978 10982 QIDPTIQRV True PC9_epitope_Rep5 1068.5927579262 1068.5916699358602 47.232 2 0.1668312795728787 0.0007088331515812432 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q922U2'] 109216 17158 TFTFSHATF True PC9_epitope_Rep4 1057.4868958753298 1057.48578993586 74.004 2 0.16683075571402695 0.0007088331515812432 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 107105 20716 SYMGHFDLL True PC9_epitope_Rep1 1081.49026700361 1081.4891699358602 84.509 2 0.16682816051876656 0.0007088331515812432 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 38689 4451 HHSDGSVSL True PC9_epitope_Rep5 937.42535824793 937.42426993586 22.189 2 0.16681078819864398 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 71317 21116 MHFLENISL True PC9_epitope_Rep1 1102.5481162329 1102.5470099358602 86.052 2 0.1668062376236918 0.0007088331515812432 0.9438714419765777 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 52457 11669 KPIEELQNV True PC9_epitope_Rep1 1068.58152453616 1068.5804299358601 49.762 2 0.16680311110361068 0.0007088331515812432 0.9438714419765777 ['ENSG00000166920|ENST00000396650|C15orf48'] 97633 7450 SHANSAVVL True PC9_epitope_Rep5 896.47158016436 896.47048993586 33.61 2 0.16680072760052655 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 115822 14889 TVMDSKIVQV True PC9_epitope_Rep3 1118.60054572858 1118.59944993586 62.407 2 0.16679824264591228 0.0007088331515812432 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 75920 8057 NRDVPNETL True PC9_epitope_Rep1 1056.51998690876 1056.5188899358602 35.813 2 0.1667975038908359 0.0007088331515812432 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 138406 13206 YRDPTTVTTL True PC9_epitope_Rep3 1165.59790287629 1165.5968099358602 55.833 2 0.1667971201433746 0.0007088331515812432 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 40067 13685 HRAPIFMRV True PC9_epitope_Rep1 1125.62295293901 1125.6213149037899 57.492 3 0.16679091591545225 0.0007088331515812432 0.9438714419765777 ['ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'ENST00000567998.5_1_16:28619793-28620024:-|nuORF'] 74172 8498 NHYQKQLEI True PC9_epitope_Rep5 1171.5985715826298 1171.59691490379 37.629 3 0.1667908300089115 0.0007088331515812432 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 31555 9977 GEFQSFSSA True NCI_RA007_Epitope_Rep4 958.4032258210199 958.40267496793 45.22 1 0.16678780018548717 0.0007088331515812432 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 75739 10233 NRAAAQYYL True PC9_epitope_Rep4 1068.53524305008 1068.5341499358601 47.04 2 0.16677739772246356 0.0007088331515812432 0.9438714419765777 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4', 'ENST00000427137.1_1_7:46039864-46040332:-|nuORF'] 6863 13827 AQIGSYVHV True PC9_epitope_Rep1 972.50288029264 972.50178993586 58.028 2 0.1667755606038657 0.0007088331515812432 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 107185 4850 SYNRGDSTF True NCI_RA007_Epitope_Rep3 1045.44648761533 1045.44538993586 26.064 2 0.16677551955497644 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000171560|P02671|FGA', 'ENSG00000171560|ENST00000403106|FGA'] 63283 7827 LPASNLAGKEA True PC9_epitope_Rep1 1069.57677350889 1069.57566993586 34.933 2 0.16677244578424733 0.0007088331515812432 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 105817 14701 SVIPQIQKV True PC9_epitope_Rep1 1010.6124307416198 1010.61132993586 61.367 2 0.16677116994813268 0.0007088331515812432 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 76523 12673 NTDNLLTEY True H1975_Epitope_Rep1 1081.49276910141 1081.49166993586 53.8 2 0.16677012752227827 0.0007088331515812432 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF'] 134916 8799 YADVGGKQF True PC9_epitope_Rep2 983.47124581119 983.47014993586 39.198 2 0.16676955584541886 0.0007088331515812432 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 24096 17461 EYRPEFSNF True PC9_epitope_Rep3 1187.5247379360299 1187.52364993586 72.341 2 0.16676592754009756 0.0007088331515812432 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 84644 14891 QHEEFVTSL True PC9_epitope_Rep3 1088.51383889916 1088.51274993586 62.414 2 0.16676174342028377 0.0007088331515812432 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 38872 18989 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 77.827 2 0.16675996175023758 0.0007088331515812432 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 43976 6479 ILGIHNEVSK True NCI_RA007_Epitope_Rep1 1108.62405805448 1108.62296993586 29.223 2 0.16675961995383878 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 18399 20292 EKDPSYFVF True PC9_epitope_Rep5 1130.5284263341398 1130.52732993586 83.102 2 0.16675559866125486 0.0007088331515812432 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 65060 12623 LSDLGISSY True H1975_Epitope_Rep1 953.47057710485 953.47002496793 53.604 1 0.1667517110194128 0.0007088331515812432 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1'] 76102 19353 NRPEFITEF True PC9_epitope_Rep1 1151.56112344475 1151.56002993586 79.247 2 0.16674935570185073 0.0007088331515812432 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 71913 9604 MPQSGTGVSV True PC9_epitope_Rep6 961.45388149489 961.45278993586 47.262 2 0.16673634437212242 0.0007088331515812432 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 84638 14798 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.51274993586 61.741 2 0.1667301565386007 0.0007088331515812432 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 129311 14301 VTDSGPTFNYL True H1975_Epitope_Rep1 1212.56626839484 1212.56567496793 60.196 1 0.16671575267192681 0.0007088331515812432 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 17244 19555 EHALLAYTL True PC9_epitope_Rep5 1029.5494961318898 1029.54838993586 80.271 2 0.1667124277656999 0.0007088331515812432 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 25279 9292 FEDVAFDEK True NCI_RA007_Epitope_Rep2 1098.48695544498 1098.4858499358602 40.754 2 0.16670769755388687 0.0007088331515812432 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 48383 3307 KEAPPMEKP True NCI_RA007_Epitope_Rep4 1025.52156713189 1025.52046993586 18.446 2 0.16670647914109785 0.0007088331515812432 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15'] 123090 19055 VHAPPMQLGF True PC9_epitope_Rep3 1095.5535359665098 1095.5524299358601 78.517 2 0.16670435537704345 0.0007088331515812432 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 97730 17906 SHFSEEVLL True PC9_epitope_Rep5 1059.52367530687 1059.52256993586 73.893 2 0.16670199323206683 0.0007088331515812432 0.9438714419765777 ['ENSG00000110628|ENST00000649076|SLC22A18'] 45382 8369 ISDPGVQGY True H1975_Epitope_Rep1 934.43961132974 934.43850993586 37.119 2 0.16669724794531887 0.0007088331515812432 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 92270 7476 RQLDTETNL True PC9_epitope_Rep4 1088.5462016566 1088.5451099358602 36.114 2 0.1666908370134794 0.0007088331515812432 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant'] 14282 5541 DSYVGDEAQTK True NCI_RA007_Epitope_Rep2 1211.5306111621096 1211.52950993586 26.17 2 0.16668729429309764 0.0007088331515812432 0.9438714419765777 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 73859 17758 NHFPGSFQI True PC9_epitope_Rep2 1045.49812926537 1045.4970299358602 73.589 2 0.1666845788766158 0.0007088331515812432 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 113259 18137 TQESVFATV True PC9_epitope_Rep5 980.4814761417199 980.48036993586 74.774 2 0.16668426109048723 0.0007088331515812432 0.9438714419765777 ['ENSG00000163808|ENST00000326047|KIF15', 'nc|ENSG00000163808|Q9NS87-4|KIF15'] 35346 8292 GSYTFDPVTK True NCI_RA007_Epitope_Rep3 1113.5342399905699 1113.5331499358601 39.738 2 0.166683067094811 0.0007088331515812432 0.9438714419765777 ['ENSG00000185009|ENST00000355264|AP3M1'] 5310 9114 ALSGHLETV True PC9_epitope_Rep2 925.48689587533 925.48578993586 40.397 2 0.16668105843155362 0.0007088331515812432 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 97943 19563 SHQLDFNVL True PC9_epitope_Rep3 1071.53490869691 1071.53380993586 80.483 2 0.166679956169576 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 107311 12338 SYREDPIVY True PC9_epitope_Rep2 1140.5451390274397 1140.5440499358601 52.769 2 0.16667656370412098 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 84994 12346 QIEEAGWSY True H1975_Epitope_Rep2 1081.4716397340098 1081.47107496793 52.573 1 0.16667440306375766 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 138234 14172 YQTEIGQTL True PC9_epitope_Rep6 1051.51858992643 1051.51748993586 66.386 2 0.1666684076565965 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 138799 12158 YSDGLGGNSLY True H1975_Epitope_Rep2 1144.5036681382799 1144.50256993586 51.85 2 0.16666741377446675 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3'] 74765 9448 NLLSVAYK True H1975_Epitope_Rep1 906.5174677276199 906.51636993586 41.257 2 0.16665666214778346 0.0007088331515812432 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 113775 7568 TRDPQVNAF True PC9_epitope_Rep6 1046.5145076054998 1046.5134099358602 38.384 2 0.16665515476279247 0.0007088331515812432 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 136835 20230 YIVDLLTHL True PC9_epitope_Rep6 1085.61209638845 1085.61098993586 90.498 2 0.16664981077010474 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2', 'GFOD2|p.V233Cfs*3|1|0.17|ENSG00000141098|chr16:67675617-67675618|-/C|frameshift_variant'] 132751 22524 VYSLQQFGF True PC9_epitope_Rep5 1087.53384606775 1087.53274993586 91.643 2 0.16664790361102702 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 35157 6534 GSDCTTIHY True H1975_Epitope_Rep2 995.4018459220301 995.40074993586 30.044 2 0.1666472971535839 0.0007088331515812432 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.Y236C|3|0.43|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 61849 20870 LLLDVPTAAV True PC9_epitope_Rep4 1010.6011973515799 1010.60010993586 88.432 2 0.16664692350213384 0.0007088331515812432 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 52551 7487 KPSGTTISVTA True PC9_epitope_Rep5 1060.57643915572 1060.57534993586 33.749 2 0.16664434641353704 0.0007088331515812432 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 74289 19748 NIIPRFVQV True PC9_epitope_Rep2 1084.6393141958001 1084.63820993586 81.351 2 0.16664007194526007 0.0007088331515812432 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C'] 124892 21698 VLLPEGGITAI True PC9_epitope_Rep1 1081.63831113629 1081.63720993586 88.291 2 0.16662717032922789 0.0007088331515812432 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 48810 4790 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 23.514 2 0.16662469854182557 0.0007088331515812432 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 5964 16523 APIWLEHAA True PC9_epitope_Rep5 1006.5236157372199 1006.52250993586 68.556 2 0.166622966766467 0.0007088331515812432 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF'] 102056 8559 SPPPPPPPP True PC9_epitope_Rep3 881.4647038787699 881.46360993586 37.875 2 0.1666228511197793 0.0007088331515812432 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 8240 14747 ATIIDILTK True NCI_RA007_Epitope_Rep5 986.60119735158 986.60010993586 63.397 2 0.16661707656502045 0.0007088331515812432 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 133039 19765 VYVSDIQEL True PC9_epitope_Rep2 1064.5389910178399 1064.5378899358602 81.414 2 0.1666110783878996 0.0007088331515812432 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 117533 15069 VAFSPVTEL True H1975_Epitope_Rep2 961.51204799401 961.51149496793 63.113 1 0.16660759255417631 0.0007088331515812432 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 31882 5419 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 25.904 2 0.16660632727638058 0.0007088331515812432 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 24501 23066 FAISILQQL True PC9_epitope_Rep1 1031.60153170475 1031.6004299358601 93.523 2 0.16660571100445562 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 37926 8089 HEEEGILVA True H1975_Epitope_Rep2 995.4923751785898 995.49126993586 36.061 2 0.16660507470745248 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4'] 72351 8643 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep1 1128.4645061286797 1128.46340993586 38.174 2 0.16660412420805484 0.0007088331515812432 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 42026 7988 IEDVPAPST True H1975_Epitope_Rep2 927.45492704071 927.4543749679301 35.675 1 0.1666005273919909 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF', 'NASP|p.T209Dfs*3|1|0.09|ENSG00000132780|chr1:45607535-45607536|-/G|frameshift_variant'] 88904 6455 REAQSLISA True NCI_RA007_Epitope_Rep4 973.5192586327698 973.51816993586 31.428 2 0.16659920224137542 0.0007088331515812432 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 136174 20889 YGIKDDVFLSV True PC9_epitope_Rep5 1254.64960409598 1254.6485099358601 85.403 2 0.1665986217370577 0.0007088331515812432 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 83703 5600 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 26.542 2 0.16659433086474953 0.0007088331515812432 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 27006 21126 FLLGPRLVLA True PC9_epitope_Rep2 1097.6961007959299 1097.69500993586 86.72 2 0.16659308001734024 0.0007088331515812432 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 128697 19061 VSNPVDILTYV True H1975_Epitope_Rep3 1218.64960409598 1218.6485099358601 79.928 2 0.1665849814886033 0.0007088331515812432 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 17795 17779 EHVPVVIGL True PC9_epitope_Rep4 961.5596668927699 961.55856993586 76.416 2 0.1665849669317018 0.0007088331515812432 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6', 'SOCS6|p.E434Gfs*2|1|0.26|ENSG00000170677|chr18:70325969-70325979|AGCACTCAAAT/-|frameshift_variant'] 32651 6780 GHLEKAVVL True NCI_RA007_Epitope_Rep4 964.5705659296399 964.56946993586 32.7 2 0.16658404543215893 0.0007088331515812432 0.9438714419765777 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'ENSG00000134107|ENST00000256495|BHLHE40', 'ENSG00000123095|ENST00000242728|BHLHE41'] 47776 10409 IYQRDPLKL True PC9_epitope_Rep4 1144.6604435631998 1144.65880490379 47.742 3 0.16657165523288991 0.0007088331515812432 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 92238 8768 RQKAVSLFL True NCI_RA007_Epitope_Rep3 1060.6393141958 1060.63820993586 41.578 2 0.16657027961191062 0.0007088331515812432 0.9438714419765777 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 24114 4904 EYSKQMQRF True NCI_RA007_Epitope_Rep5 1215.57064258263 1215.56899490379 25.556 3 0.16656661241973417 0.0007088331515812432 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 114043 16229 TRNDIVNML True PC9_epitope_Rep4 1074.54917886206 1074.5480899358602 70.366 2 0.16656572910475775 0.0007088331515812432 0.9438714419765777 ['ENST00000465772.5_1_10:27793310-27827017:+|nuORF', 'ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18'] 83868 11034 QEHPVVLLP True H1975_Epitope_Rep3 1030.5811306133398 1030.58002993586 47.532 2 0.16656488707700484 0.0007088331515812432 0.9438714419765777 ['ENSG00000116906|ENST00000366647|GNPAT', 'nc|ENSG00000116906|O15228-2|GNPAT'] 132793 17910 VYSQIPAAVKL True PC9_epitope_Rep3 1187.6914093383098 1187.6903099358601 74.093 2 0.16656415519268902 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 102963 8713 SQIQEFKEA True PC9_epitope_Rep1 1078.5294889632999 1078.52838993586 38.352 2 0.16656123369569523 0.0007088331515812432 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 94955 9668 RYPTSIASL True NCI_RA007_Epitope_Rep3 1006.5447451046199 1006.54364993586 45.107 2 0.16655066776227456 0.0007088331515812432 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 136434 12932 YHGAEIVSL True PC9_epitope_Rep6 987.50254593947 987.50144993586 61.285 2 0.1665412055877755 0.0007088331515812432 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 28940 12990 FTEQWTDGY True H1975_Epitope_Rep1 1145.4665543535698 1145.46597496793 55.046 1 0.16653919584599067 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2'] 11535 8793 DGLILTSR True H1975_Epitope_Rep3 873.49198125577 873.49088993586 38.828 2 0.16653595251480965 0.0007088331515812432 0.9438714419765777 ['ENSG00000116288|ENST00000338639|PARK7'] 76223 17527 NRYEDALVL True PC9_epitope_Rep5 1091.56112344475 1091.56002993586 72.423 2 0.16653188595792592 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000567842.5_1_16:28138076-28157497:-|nuORF'] 108236 10739 TEAGMFAIRA True H1975_Epitope_Rep2 1065.5277151414898 1065.52660993586 46.335 2 0.1665297564475447 0.0007088331515812432 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000470499.1_1_3:131895323-131895440:+|nuORF', 'ENSG00000161057|ENST00000292644|PSMC2', 'nc|ENSG00000161057|P35998-2|PSMC2'] 20692 10484 EQILEEFSK True H1975_Epitope_Rep1 1121.5604547384098 1121.5593499358602 45.282 2 0.1665274456238793 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 138291 14663 YQYPVIIHL True H1975_Epitope_Rep3 1144.6280808057597 1144.6269899358601 61.768 2 0.16652689067331813 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 99174 22338 SLAQYLINV True PC9_epitope_Rep5 1019.5651461960299 1019.56404993586 90.934 2 0.1665206635796852 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 127475 7149 VQTEVNREL True PC9_epitope_Rep2 1086.56693710118 1086.5658499358601 32.892 2 0.16651979279779844 0.0007088331515812432 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 139775 10345 YVDAGTPMY True H1975_Epitope_Rep3 1015.4320834211499 1015.43157496793 44.846 1 0.16651693030461912 0.0007088331515812432 0.9438714419765777 ['ENSG00000155189|ENST00000285518|AGPAT5', 'AGPAT5|p.T229Rfs*19|1|0.39|ENSG00000155189|chr8:6747769-6747769|C/-|frameshift_variant'] 108305 5420 TEDDPQEVSA True H1975_Epitope_Rep3 1089.44621283181 1089.44510993586 25.907 2 0.16651527385498927 0.0007088331515812432 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 72366 9017 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46340993586 39.681 2 0.16651312539486632 0.0007088331515812432 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 103447 8300 SRAETVAQL True PC9_epitope_Rep5 973.5192586327698 973.51816993586 36.864 2 0.16650670773321843 0.0007088331515812432 0.9438714419765777 ['ENSG00000112812|ENST00000230582|PRSS16', 'ENST00000468138.5_1_6:27219498-27223091:+|nuORF'] 24171 12119 EYTLMRATF True NCI_RA007_Epitope_Rep3 1130.5430308524599 1130.54192993586 54.783 2 0.16649323619759634 0.0007088331515812432 0.9438714419765777 ['ENSG00000185950|ENST00000375856|IRS2'] 105751 18151 SVIDHIHLI True PC9_epitope_Rep2 1045.59202965021 1045.59092993586 75.12 2 0.1664928471629989 0.0007088331515812432 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 35484 8396 GTFDPDNLEK True NCI_RA007_Epitope_Rep4 1134.5193182024198 1134.51822993586 39.11 2 0.1664884939046376 0.0007088331515812432 0.9438714419765777 ['ENSG00000182154|ENST00000371443|MRPL41'] 14019 20218 DRYQYPFVL True PC9_epitope_Rep4 1199.5975089534697 1199.59640993586 85.908 2 0.16648820154917676 0.0007088331515812432 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2', 'SGPP2|p.M182I|1|0.33|ENSG00000163082|chr2:222521934-222521934|G/A|missense_variant'] 53219 9921 KTDLDLDGY True H1975_Epitope_Rep2 1038.48695544498 1038.4858499358602 43.15 2 0.16648725526564612 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'EPS15L1|p.F303Lfs*11|1|0.25|ENSG00000127527|chr19:16421360-16421360|G/-|frameshift_variant', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1'] 109796 6364 THITAQTAV True PC9_epitope_Rep5 940.4977949122 940.49668993586 29.457 2 0.16648608403037407 0.0007088331515812432 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 7277 9030 ARPPGYEF True PC9_epitope_Rep6 935.45011644379 935.44900993586 44.776 2 0.16648372307783588 0.0007088331515812432 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 21023 12913 ERATNIEVL True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 54.692 2 0.166483207637553 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 76464 15646 NTDDWENFAY True H1975_Epitope_Rep2 1273.48874635013 1273.4876499358602 65.338 2 0.16648282060378733 0.0007088331515812432 0.9438714419765777 ['ENSG00000143669|ENST00000389793|LYST'] 128514 9248 VSGGLEVLAEK True H1975_Epitope_Rep1 1100.607739284 1100.60664993586 40.484 2 0.16647714458953045 0.0007088331515812432 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF', 'nc|ENSG00000248546|O43423|ANP32CP'] 45412 8968 ISDSDYQAEY True H1975_Epitope_Rep1 1189.47751296009 1189.47697496793 39.4 1 0.16646874550293933 0.0007088331515812432 0.9438714419765777 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3'] 47195 17910 IYAPKLQEF True PC9_epitope_Rep1 1107.59644632431 1107.5953499358602 73.682 2 0.16646847059472875 0.0007088331515812432 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 16250 13585 EEHEWFIPA True H1975_Epitope_Rep3 1156.5189242796 1156.5178299358602 57.538 2 0.16646790320453683 0.0007088331515812432 0.9438714419765777 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 47380 19290 IYIDRGVVF True PC9_epitope_Rep2 1080.59678067748 1080.59568993586 79.573 2 0.16646588954036512 0.0007088331515812432 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11', 'nc|ENSG00000100109|Q9UBB9-2|TFIP11'] 71714 4299 MM[Oxidation]DPNSTQRY True H1975_Epitope_Rep3 1257.51180775761 1257.5107099358602 21.651 2 0.16646048706926367 0.0007088331515812432 0.9438714419765777 ['ENSG00000124571|ENST00000265351|XPO5'] 71393 8304 M[Oxidation]IEPRTLQY True H1975_Epitope_Rep3 1165.58014501761 1165.5790499358602 36.925 2 0.16645945606617757 0.0007088331515812432 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 113919 16997 TRIGLINDM True PC9_epitope_Rep5 1031.54336520563 1031.54226993586 70.397 2 0.1664575053994629 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.P364L|1|0.32|ENSG00000107581|chr10:119065430-119065430|G/A|missense_variant'] 52818 19606 KQVEEIFNL True PC9_epitope_Rep3 1118.5971746003 1118.5960699358602 80.651 2 0.1664554285306761 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 94979 15191 RYQDAIRVF True PC9_epitope_Rep3 1166.6196413803798 1166.61799490379 63.577 3 0.1664471019121043 0.0007088331515812432 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 72170 17198 MRMLAEDEL True PC9_epitope_Rep1 1106.51001647202 1106.5089099358602 70.971 2 0.16644228081311685 0.0007088331515812432 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 3370 18096 AGIKEYFNV True PC9_epitope_Rep5 1039.53384606775 1039.53274993586 74.618 2 0.16644017505782743 0.0007088331515812432 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF'] 41647 10570 IDIIPNPQER True NCI_RA007_Epitope_Rep1 1193.64043639461 1193.6393299358601 45.098 2 0.1664359804650609 0.0007088331515812432 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 43565 17485 IIEPSLRQLA True PC9_epitope_Rep1 1138.6710082468999 1138.66990993586 72.051 2 0.1664331720911014 0.0007088331515812432 0.9438714419765777 ['ENSG00000221983|ENST00000442744|UBA52'] 15169 7313 EAESSPFVER True PC9_epitope_Rep6 1149.5302172392899 1149.52912993586 37.294 2 0.16642124810342765 0.0007088331515812432 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 76694 5782 NTMNQFVNK True NCI_RA007_Epitope_Rep3 1094.51787873378 1094.51678993586 29.723 2 0.1664204949891021 0.0007088331515812432 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 11686 15874 DHDSSEYLL True PC9_epitope_Rep5 1077.46146897313 1077.4603699358602 66.051 2 0.16641689041754357 0.0007088331515812432 0.9438714419765777 ['ENSG00000075461|ENST00000262138|CACNG4'] 137310 10888 YLHSQVVSV True PC9_epitope_Rep2 1030.5447451046198 1030.54364993586 47.198 2 0.16641248797947805 0.0007088331515812432 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 94549 10356 RYIPTAAAF True NCI_RA007_Epitope_Rep1 1008.5392658013599 1008.53816993586 44.268 2 0.1664124610678803 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 117450 12742 VADTVARVL True PC9_epitope_Rep1 942.5498304850598 942.54872993586 53.887 2 0.1664110744895967 0.0007088331515812432 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 90982 21906 RLIESLFTI True PC9_epitope_Rep5 1090.63864548946 1090.63754993586 89.301 2 0.16640642795912766 0.0007088331515812432 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 84874 10834 QHQSGIVQL True PC9_epitope_Rep5 1008.5352430500798 1008.53414993586 46.66 2 0.16639853171726388 0.0007088331515812432 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 107420 5585 SYTSGPGSRI True NCI_RA007_Epitope_Rep4 1023.49852318819 1023.4974299358599 28.084 2 0.1663973788331682 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 114829 11797 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.49807496793 50.369 1 0.16639596272380597 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 62246 12738 LLQDFFNGR True NCI_RA007_Epitope_Rep3 1108.56654317836 1108.5654499358602 57.338 2 0.16639020031048865 0.0007088331515812432 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 109684 13914 THEEGSYLF True PC9_epitope_Rep2 1081.47163973401 1081.4705499358602 58.799 2 0.1663885457612702 0.0007088331515812432 0.9438714419765777 ['ENSG00000182827|ENST00000366812|ACBD3'] 38604 10682 HHINDTDTIL True PC9_epitope_Rep1 1177.57275075761 1177.57164993586 45.979 2 0.16637982257124842 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 75408 15007 NQFPGFKEV True PC9_epitope_Rep2 1064.52909504048 1064.5279899358602 62.979 2 0.16637678367643974 0.0007088331515812432 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 113587 16780 TRAEWMIAA True PC9_epitope_Rep5 1047.5171504577897 1047.51604993586 69.55 2 0.16637594019282265 0.0007088331515812432 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 138397 11129 YRDPNTIETL True PC9_epitope_Rep6 1220.60371653272 1220.60260993586 53.748 2 0.16637215112411874 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 120228 20253 VFNDVRLLL True PC9_epitope_Rep4 1087.6389798426299 1087.6378899358601 86.045 2 0.1663660683655581 0.0007088331515812432 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 65022 12562 LSDISVVSNY True H1975_Epitope_Rep1 1095.54480467427 1095.54427496793 53.364 1 0.16635971628399754 0.0007088331515812432 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'IFI44|p.S393F|1|0.37|ENSG00000137965|chr1:78662768-78662768|C/T|missense_variant', 'ENST00000485662.1_1_1:79126346-79129493:+|nuORF', 'ENST00000476911.1_1_1:79128352-79129493:+|nuORF'] 105099 17114 STLHLVLRL True PC9_epitope_Rep4 1050.65496425994 1050.65386993586 73.833 2 0.16635962142897123 0.0007088331515812432 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 69916 16044 LYDIILKNF True NCI_RA007_Epitope_Rep5 1137.64339651673 1137.6422899358602 68.443 2 0.1663582981307465 0.0007088331515812432 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1'] 139390 7078 YTEEDAASY True H1975_Epitope_Rep1 1047.40328539067 1047.4027749679299 32.252 1 0.16635509373052426 0.0007088331515812432 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 132611 19789 VYPQYVIEY True PC9_epitope_Rep4 1172.57537652656 1172.57426993586 84.244 2 0.16635150119194891 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 126507 13558 VPNKFLVTA True PC9_epitope_Rep5 987.5753169569099 987.57420993586 57.173 2 0.16635136276301982 0.0007088331515812432 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 130707 15220 VVDIQGVGDLY True H1975_Epitope_Rep1 1176.6026539035597 1176.60154993586 63.808 2 0.1663505191437954 0.0007088331515812432 0.9438714419765777 ['ENSG00000103319|ENST00000263026|EEF2K'] 60651 8686 LITPAVVSER True NCI_RA007_Epitope_Rep5 1083.62880908175 1083.6277099358601 40.075 2 0.16634548409846675 0.0007088331515812432 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 136726 23616 YILPFSEVL True PC9_epitope_Rep5 1079.59029831471 1079.58920993586 95.818 2 0.1663426555219825 0.0007088331515812432 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000531161.5_1_11:44146432-44228372:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 69146 18190 LVLPNRITV True PC9_epitope_Rep2 1023.64406522307 1023.6429699358599 75.275 2 0.16634092379650556 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 129371 12218 VTEEFQPVY True H1975_Epitope_Rep3 1110.5233409536997 1110.52277496793 52.169 1 0.16633899328654747 0.0007088331515812432 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 21029 10939 ERDALNIET True PC9_epitope_Rep1 1059.51965255559 1059.5185499358602 46.965 2 0.16633881757395197 0.0007088331515812432 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 102531 5708 SQADVSQKL True PC9_epitope_Rep5 974.50327421546 974.50216993586 26.951 2 0.16633239197468594 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000088899|O60299-2|LZTS3', 'ENSG00000088899|ENST00000337576|LZTS3'] 11821 12481 DHMDGSYSL True PC9_epitope_Rep1 1023.3967605415901 1023.3956699358599 52.876 2 0.16633215296803527 0.0007088331515812432 0.9438714419765777 ['ENSG00000112290|ENST00000392589|WASF1'] 15934 5949 EDSNLTLQEK True NCI_RA007_Epitope_Rep2 1175.56699667083 1175.56588993586 27.75 2 0.1663302056545634 0.0007088331515812432 0.9438714419765777 ['ENSG00000140575|ENST00000268182|IQGAP1', 'ENST00000561132.5_1_15:91029339-91034840:+|nuORF'] 41172 21666 HYTYILEVF True PC9_epitope_Rep5 1183.5913609438696 1183.59026993586 88.385 2 0.16632953335487197 0.0007088331515812432 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 19955 13000 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47904993586 55.121 2 0.16632943355459195 0.0007088331515812432 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 107366 20289 SYSHIMALI True PC9_epitope_Rep5 1033.52665251233 1033.52554993586 83.091 2 0.1663254343934391 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 76225 17822 NRYGQLTIL True PC9_epitope_Rep5 1076.59784330664 1076.59674993586 73.572 2 0.16632388239692944 0.0007088331515812432 0.9438714419765777 ['ENST00000397656.8_1_12:111066004-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-4|TCTN1', 'ENST00000495659.6_1_12:111052207-111085694:+|nuORF', 'nc|ENSG00000204852|Q2MV58-3|TCTN1', 'nc|ENSG00000204852|Q2MV58|TCTN1', 'ENSG00000204852|ENST00000397659|TCTN1'] 135284 15887 YAYTGVLQL True H1975_Epitope_Rep3 1026.53859709502 1026.53750993586 66.558 2 0.16632086066153481 0.0007088331515812432 0.9438714419765777 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4', 'KLHL4|p.Q238H|1|0.86|ENSG00000102271|chrX:87614557-87614557|G/T|missense_variant'] 112055 15109 TLTEEGVIKV True PC9_epitope_Rep5 1087.6124903112698 1087.6113899358602 63.122 2 0.16631339444652812 0.0007088331515812432 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 70309 18400 LYPEVFEKF True PC9_epitope_Rep6 1170.5961119711399 1170.5950099358602 83.421 2 0.16630791027460884 0.0007088331515812432 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 47660 12622 IYPPKLHQF True PC9_epitope_Rep5 1141.62841515893 1141.62730993586 53.553 2 0.1663046071791212 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 34762 10484 GQSELASRLTL True NCI_RA007_Epitope_Rep3 1173.6353510141698 1173.63424993586 48.3 2 0.16629993788293695 0.0007088331515812432 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 89773 10929 RFEEAHFTF True NCI_RA007_Epitope_Rep2 1182.5458077337796 1182.54470993586 47.118 2 0.1662998053915331 0.0007088331515812432 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 72101 18374 MRDPIRILV True PC9_epitope_Rep5 1111.65358436095 1111.65248993586 75.694 2 0.16629104790750607 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 105766 7389 SVIDTSTIVRK True NCI_RA007_Epitope_Rep1 1217.69795127073 1217.69629490379 32.736 3 0.16628968038974418 0.0007088331515812432 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN', 'ENST00000495595.1_1_2:37111179-37129881:-|nuORF'] 32416 6003 GGGQIIPTAR True H1975_Epitope_Rep3 968.5403284305199 968.53922993586 28.103 2 0.1662838969432376 0.0007088331515812432 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 74659 7745 NLGGLAVAR True NCI_RA007_Epitope_Rep1 869.5083000262499 869.50720993586 34.119 2 0.16627850531493923 0.0007088331515812432 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 17161 14759 EHAEALLL True PC9_epitope_Rep2 894.4810822188999 894.47998993586 62.035 2 0.16627660367006955 0.0007088331515812432 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 92210 2872 RQHNTEIRM True NCI_RA007_Epitope_Rep4 1183.5880239822698 1183.58638490379 16.081 3 0.16627415108283286 0.0007088331515812432 0.9438714419765777 ['FKBP15|p.G1133Vfs*45|2|0.29|ENSG00000119321|chr9:113169311-113169311|C/-|frameshift_variant', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'ENSG00000119321|ENST00000238256|FKBP15'] 123622 14472 VILEGELERA True PC9_epitope_Rep2 1127.6186383208699 1127.61754993586 60.937 2 0.16627099033009612 0.0007088331515812432 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 67127 11164 LTDDGNKWLY True H1975_Epitope_Rep3 1223.58225281215 1223.58167496793 48.04 1 0.16626906216200107 0.0007088331515812432 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000466987.1_1_3:184021130-184021370:+|nuORF', 'ENST00000460628.1_1_3:184020551-184021585:+|nuORF'] 74801 18925 NLNPEFISV True PC9_epitope_Rep6 1031.5287606873098 1031.52766993586 85.44 2 0.16626872054579728 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 9676 21539 AYGSLFNTI True PC9_epitope_Rep5 984.4916469026 984.49054993586 87.886 2 0.16626646623365232 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 97776 9296 SHHENLVSF True PC9_epitope_Rep2 1068.49885754136 1068.49776993586 41.097 2 0.16626292497883002 0.0007088331515812432 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 8586 19640 AVAELNYGL True PC9_epitope_Rep2 948.4916469026 948.49054993586 80.93 2 0.16625586054883443 0.0007088331515812432 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 11703 7316 DHFASVHSV True PC9_epitope_Rep5 997.46174375665 997.46064993586 33.102 2 0.16625558045965763 0.0007088331515812432 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 72384 9722 MTEEEQIAY True H1975_Epitope_Rep3 1112.4695911286797 1112.4690749679298 42.416 1 0.16625224237214423 0.0007088331515812432 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 21054 6837 ERDM[Oxidation]SNVSL True PC9_epitope_Rep1 1065.47607387189 1065.4749699358601 31.104 2 0.1662490120800389 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 11490 8386 DGETLEELM[Oxidation]K True H1975_Epitope_Rep3 1179.5329200416697 1179.53182993586 37.24 2 0.16623050019317867 0.0007088331515812432 0.9438714419765777 ['ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 8130 9597 ATETQPIVY True H1975_Epitope_Rep2 1020.5127762699997 1020.51227496793 41.891 1 0.16622995841501834 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 62788 12364 LMDRPIFY True H1975_Epitope_Rep3 1053.5317378927698 1053.53064993586 52.744 2 0.1662282051109808 0.0007088331515812432 0.9438714419765777 ['ENSG00000141012|ENST00000268695|GALNS', 'ENST00000568613.5_1_16:88880849-88909575:-|nuORF'] 28477 4795 FSETGGGEKY True H1975_Epitope_Rep2 1073.4665543535698 1073.46544993586 23.533 2 0.16622807329615846 0.0007088331515812432 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 21138 11589 ERDSALETL True PC9_epitope_Rep1 1032.50875351872 1032.5076499358602 49.454 2 0.16622705640951083 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 21108 14347 ERDPSPWAV True PC9_epitope_Rep1 1055.50360856863 1055.5025099358602 60.009 2 0.1662235751912577 0.0007088331515812432 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 139668 14588 YTTDDIEFY True H1975_Epitope_Rep2 1165.48153571137 1165.48042993586 61.269 2 0.16622294756933187 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000166206|P28472-3|GABRB3', 'nc|ENSG00000166206|P28472-2|GABRB3', 'ENSG00000166206|ENST00000311550|GABRB3', 'GABRB1|p.L248Ffs*23|1|0.15|ENSG00000163288|chr4:47403615-47403616|-/T|frameshift_variant', 'nc|ENSG00000145864|P47870-3|GABRB2', 'nc|ENSG00000145864|P47870-4|GABRB2', 'GABRB1|p.N376Mfs*12|1|0.51|ENSG00000163288|chr4:47425717-47425717|G/-|frameshift_variant', 'nc|ENSG00000166206|P28472-4|GABRB3', 'GABRB2|p.Q336Nfs*71|1|0.17|ENSG00000145864|chr5:161330954-161330954|G/-|frameshift_variant', 'GABRB1|p.R411Afs*33|1|0.28|ENSG00000163288|chr4:47425823-47425823|C/-|frameshift_variant', 'nc|ENSG00000145864|P47870-1|GABRB2', 'ENSG00000163288|ENST00000295454|GABRB1', 'ENSG00000145864|ENST00000393959|GABRB2'] 59830 15524 LHDSSDYLL True PC9_epitope_Rep1 1061.50293986229 1061.50184993586 64.536 2 0.1662206876373052 0.0007088331515812432 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2', 'ENST00000482825.7_1_1:150939531-150940017:-|nuORF', 'ENST00000558501.5_1_19:8275630-8321979:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF'] 131788 18686 VYAILTHGI True PC9_epitope_Rep3 985.5596668927699 985.55856993586 77.096 2 0.16621832769467126 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 1246 4760 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 23.398 2 0.16621830029276424 0.0007088331515812432 0.9438714419765777 ['ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7', 'nc|ENSG00000243414|Q86XR7-2|TICAM2'] 2171 4649 AEM[Oxidation]PQNYRP True H1975_Epitope_Rep2 1120.4971436696399 1120.4960499358601 22.981 2 0.16621760627817675 0.0007088331515812432 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 38064 7414 HEMFPAVHA True H1975_Epitope_Rep2 1037.4752856458097 1037.47418993586 33.46 2 0.16621584056056105 0.0007088331515812432 0.9438714419765777 ['ENSG00000113638|ENST00000337702|TTC33'] 24754 17772 FAYDGKDYL True PC9_epitope_Rep5 1090.4971262058598 1090.4960299358602 73.379 2 0.16621059575081645 0.0007088331515812432 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 140662 14932 YYPSTPGRYSI True PC9_epitope_Rep1 1302.6244519773 1302.62334993586 62.259 2 0.16620155403675618 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 107710 17759 TALLKIEGV True PC9_epitope_Rep3 942.57498260374 942.5744349679301 73.508 1 0.16619655049452542 0.0007088331515812432 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 67299 11602 LTDPIQGTEY True H1975_Epitope_Rep1 1135.53971929383 1135.53917496793 49.616 1 0.16619555417173285 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 132686 15193 VYRTVIEYY True PC9_epitope_Rep4 1204.6128246644398 1204.61172993586 66.363 2 0.16619131574954266 0.0007088331515812432 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20'] 74007 7356 NHQKDIQVL True PC9_epitope_Rep5 1093.58800689893 1093.5869099358601 33.253 2 0.16618111695390791 0.0007088331515812432 0.9438714419765777 ['ENSG00000153561|ENST00000283632|RMND5A'] 41853 18328 IDTIEIITDR True PC9_epitope_Rep2 1187.63976768827 1187.6386699358602 75.828 2 0.16617111053933123 0.0007088331515812432 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 87048 7273 QSDPTQSGMY True H1975_Epitope_Rep3 1112.44443901 1112.4433499358602 32.95 2 0.1661701227767973 0.0007088331515812432 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 86689 15546 QRIDEFEAM True PC9_epitope_Rep3 1137.5124590001699 1137.51136993586 64.946 2 0.16616908960417134 0.0007088331515812432 0.9438714419765777 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 113521 11220 TQTAVITRI True PC9_epitope_Rep5 1001.5869442697699 1001.58584993586 48.147 2 0.1661622995774213 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 75937 20807 NRFEDILSL True PC9_epitope_Rep2 1105.5767735088898 1105.57566993586 85.475 2 0.16615879282321494 0.0007088331515812432 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 140754 18644 YYQSSVQYL True PC9_epitope_Rep1 1149.5342399905699 1149.5331499358601 76.503 2 0.1661538987297112 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 8175 8941 ATGDMSGLLK True NCI_RA007_Epitope_Rep5 991.5008316873099 991.49972993586 41.051 2 0.16614572048355417 0.0007088331515812432 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 73878 13506 NHHLFTTTI True PC9_epitope_Rep5 1082.5508931142201 1082.5497899358602 56.97 2 0.16614351200293354 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 49530 7083 KKFLKPYTL True NCI_RA007_Epitope_Rep4 1136.69576644276 1136.69466993586 33.868 2 0.16614144322586163 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3', 'ATP1B3|p.L110I|2|0.19|ENSG00000069849|chr3:141907256-141907256|C/A|missense_variant'] 25364 7340 FEHITAETP True H1975_Epitope_Rep1 1043.49237517859 1043.4912699358601 33.242 2 0.16613905574533658 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000128487|Q5M775-5|SPECC1', 'nc|ENSG00000128487|Q5M775-3|SPECC1', 'nc|ENSG00000128487|Q5M775-2|SPECC1', 'nc|ENSG00000128487|Q5M775-4|SPECC1', 'ENSG00000128487|ENST00000395527|SPECC1'] 11662 11157 DHDIPQQL True PC9_epitope_Rep2 964.46140940348 964.46030993586 48.241 2 0.1661302593652511 0.0007088331515812432 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 103692 14265 SRDQTVLGL True PC9_epitope_Rep5 987.5349086969098 987.53380993586 59.874 2 0.16612264977919888 0.0007088331515812432 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1'] 77359 20443 NYLLYVSNF True PC9_epitope_Rep6 1131.5600608155898 1131.5589699358602 91.351 2 0.166120150981247 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 36473 18399 GVISKTFQL True PC9_epitope_Rep3 991.57023157647 991.56912993586 75.98 2 0.16611166303649996 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 42226 4619 IEHDVVMKA True H1975_Epitope_Rep3 1040.5324661687598 1040.53136993586 22.889 2 0.16610103078123892 0.0007088331515812432 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 70399 22034 LYQFNPAFF True PC9_epitope_Rep4 1145.5545815123298 1145.5534899358602 92.975 2 0.16609416174903005 0.0007088331515812432 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 86946 19908 QRTFVLEVM True PC9_epitope_Rep5 1121.5903153980498 1121.58920993586 81.63 2 0.1660935628423281 0.0007088331515812432 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP', 'ENST00000466134.5_1_21:45719988-45734072:+|nuORF', 'nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF'] 11936 16832 DHSPDLYSL True PC9_epitope_Rep2 1045.47163973401 1045.4705499358602 69.993 2 0.16608189369139512 0.0007088331515812432 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ENST00000417716.1_1_1:197191903-197192119:+|nuORF'] 84706 20902 QHFDTIYSIL True PC9_epitope_Rep2 1235.6186383208699 1235.61754993586 85.845 2 0.16607020430890568 0.0007088331515812432 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 108350 5166 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 24.948 2 0.1660701672443855 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 46184 8531 ITDHGSLIY True H1975_Epitope_Rep3 1017.51311062317 1017.51200993586 37.8 2 0.16606986081616917 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 138157 15562 YQLSKEYTL True PC9_epitope_Rep1 1143.58119018299 1143.58008993586 64.683 2 0.16606652793979385 0.0007088331515812432 0.9438714419765777 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF'] 105523 12770 SVDGVIKEV True PC9_epitope_Rep5 944.51786165044 944.51676993586 54.129 2 0.16606286949374363 0.0007088331515812432 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 120036 8587 VFEDAAEIR True NCI_RA007_Epitope_Rep1 1048.5189242795998 1048.5178299358602 37.404 2 0.16606262534450697 0.0007088331515812432 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 139349 8690 YTDSYTDTY True H1975_Epitope_Rep1 1127.42950013851 1127.4284099358601 38.357 2 0.16606231034886598 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 97957 7809 SHQTGVVAL True PC9_epitope_Rep4 910.4872302284999 910.48612993586 37.439 2 0.1660560713377756 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 272 12632 AAGSPVFL True H1975_Epitope_Rep2 760.41194002992 760.41139496793 53.689 1 0.1660531773330403 0.0007088331515812432 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 131958 19165 VYFVAPAKF True PC9_epitope_Rep5 1040.5695033004797 1040.56840993586 78.755 2 0.1660506364291786 0.0007088331515812432 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 39821 11684 HQFESSFEL True NCI_RA007_Epitope_Rep5 1122.4981888350198 1122.49708993586 51.595 2 0.16604698787028413 0.0007088331515812432 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 140232 17953 YWMHVQNTF True PC9_epitope_Rep4 1224.53861417836 1224.53750993586 77.109 2 0.16604399593793687 0.0007088331515812432 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 106139 17378 SVPDPELIKTV True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 71.651 2 0.1660436446291471 0.0007088331515812432 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 108815 9572 TEQPPSPLP True H1975_Epitope_Rep1 964.48656152216 964.48601496793 41.742 1 0.16603611045606054 0.0007088331515812432 0.9438714419765777 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 47761 12329 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65880490379 52.281 3 0.1660351232367864 0.0007088331515812432 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 136460 5235 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 25.526 2 0.16603270571073636 0.0007088331515812432 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 102860 15923 SQHGVIIQL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 66.057 2 0.16603046615974026 0.0007088331515812432 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 94477 19270 RYGNTPFLF True PC9_epitope_Rep4 1113.56072952193 1113.5596299358601 82.225 2 0.1660295207693367 0.0007088331515812432 0.9438714419765777 ['ENSG00000188419|ENST00000357749|CHM'] 42819 17982 IFKPPDPDNTF True PC9_epitope_Rep1 1289.62920300457 1289.62810993586 73.961 2 0.1660225608890784 0.0007088331515812432 0.9438714419765777 ['ENSG00000165943|ENST00000298894|MOAP1'] 41730 12248 IDNNIEQISSY True NCI_RA007_Epitope_Rep5 1294.60411045554 1294.6030099358602 53.761 2 0.16602157257481548 0.0007088331515812432 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 45326 9983 ISDAIPELK True NCI_RA007_Epitope_Rep1 984.54916177872 984.54806993586 42.836 2 0.16601818714849695 0.0007088331515812432 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2'] 104024 14154 SRSPEYLSL True PC9_epitope_Rep2 1050.53457434374 1050.53346993586 59.713 2 0.16601772873620294 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3', 'ENST00000484081.1_1_2:225370642-225376119:-|nuORF'] 54145 15330 KYNANFVTF True PC9_epitope_Rep6 1102.54474510462 1102.54364993586 71.096 2 0.16601678866343203 0.0007088331515812432 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 70608 20983 MAAAWPLLL True H1975_Epitope_Rep2 984.5466596809199 984.5461149679301 86.86 1 0.16601527582571118 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 113615 15247 TRDAGYGGLSL True PC9_epitope_Rep1 1108.5512870370399 1108.55018993586 63.467 2 0.16601055665488607 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 107282 20318 SYQKVIELF True PC9_epitope_Rep5 1125.6070110080097 1125.6059099358602 83.193 2 0.16600950363479097 0.0007088331515812432 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 39123 16294 HLDLGILYY True H1975_Epitope_Rep1 1105.58079626017 1105.5802749679299 68.028 1 0.1660001545047538 0.0007088331515812432 0.9438714419765777 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 105370 6904 STYRDFQQA True PC9_epitope_Rep2 1114.50433684462 1114.5032299358602 31.957 2 0.16599746718331335 0.0007088331515812432 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 53684 8078 KYAHMINGF True NCI_RA007_Epitope_Rep4 1079.52223583823 1079.52112993586 37.853 2 0.16599551130804815 0.0007088331515812432 0.9438714419765777 ['ENSG00000035687|ENST00000366535|ADSS2'] 84530 10046 QHADPPVQI True PC9_epitope_Rep1 1003.50869394907 1003.50758993586 43.51 2 0.16599050314295807 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 3231 4649 AGFAGDDAPR True NCI_RA007_Epitope_Rep3 975.4410083120698 975.43990993586 25.209 2 0.16598167181440102 0.0007088331515812432 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 75933 12639 NRESYEVSL True PC9_epitope_Rep1 1095.51965255559 1095.5185499358602 53.486 2 0.16597678640849944 0.0007088331515812432 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000502972.1_1_4:48859213-48862776:+|nuORF'] 96213 7213 SEELQSVQA True H1975_Epitope_Rep3 989.4665543535699 989.46544993586 32.716 2 0.1659758921328014 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF', 'ENST00000486527.6_1_2:25016788-25037388:+|nuORF', 'ENST00000498362.1_1_2:25016366-25039516:+|nuORF'] 72709 20669 MYPRLGGFVM True PC9_epitope_Rep3 1169.5725571589298 1169.57144993586 84.776 2 0.16597439525884472 0.0007088331515812432 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF'] 39867 12983 HQIEAVDGEEL True PC9_epitope_Rep1 1238.5778957076998 1238.57678993586 54.81 2 0.165973327784833 0.0007088331515812432 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 40740 17228 HTVGELIEV True PC9_epitope_Rep1 995.5287606873098 995.52766993586 71.085 2 0.1659729145965994 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 4329 12445 AIMDPLPLR True NCI_RA007_Epitope_Rep4 1024.57393705792 1024.57282993586 54.878 2 0.16597287406625538 0.0007088331515812432 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 103321 14848 SQVDRLVAL True PC9_epitope_Rep4 999.5712942056298 999.57018993586 65.052 2 0.16597177382229014 0.0007088331515812432 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 132644 15508 VYQHLFTRI True PC9_epitope_Rep3 1175.6451278522297 1175.64349490379 64.802 3 0.16596342057179864 0.0007088331515812432 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 58915 8558 LFVGGIKEDTE True NCI_RA007_Epitope_Rep3 1206.61321858726 1206.6121299358601 40.736 2 0.1659633831935247 0.0007088331515812432 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 77473 18927 NYPETLGRLLI True PC9_epitope_Rep6 1287.7186867153098 1287.7175899358601 85.448 2 0.16595348490797573 0.0007088331515812432 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 138698 16863 YRVFTTQEL True PC9_epitope_Rep1 1155.5924235730297 1155.5913299358601 69.688 2 0.16595098789976934 0.0007088331515812432 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 61442 7218 LLEVVQSGGK True H1975_Epitope_Rep3 1028.5866099165996 1028.58550993586 32.735 2 0.1659492132180128 0.0007088331515812432 0.9438714419765777 ['ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000101182|O14818-2|PSMA7', 'nc|ENSG00000154611|Q8TAA3-2|PSMA8', 'ENSG00000154611|ENST00000415576|PSMA8', 'nc|ENSG00000154611|Q8TAA3|PSMA8', 'ENST00000484488.5_1_20:60711915-60714832:-|nuORF'] 24315 12053 FADGHVLEL True H1975_Epitope_Rep1 999.5025459394699 999.50144993586 51.372 2 0.1659484084762529 0.0007088331515812432 0.9438714419765777 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 139429 16322 YTELEAIMY True H1975_Epitope_Rep2 1131.5158130451098 1131.51470993586 68.0 2 0.16594190082437604 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 20684 21214 EQIKDIFYI True PC9_epitope_Rep1 1167.6175756917098 1167.61646993586 86.425 2 0.16593280698880955 0.0007088331515812432 0.9438714419765777 ['ENSG00000164902|ENST00000297540|PHAX'] 60153 18966 LHYGLPVVV True PC9_epitope_Rep4 995.5804023373499 995.57930993586 81.042 2 0.16593099732467095 0.0007088331515812432 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 64773 12894 LRSDSYVEL True PC9_epitope_Rep4 1080.54513902744 1080.5440499358601 57.475 2 0.165930577770278 0.0007088331515812432 0.9438714419765777 ['ENST00000463783.1_1_3:196666081-196669374:-|nuORF', 'nc|ENSG00000114503|P52298-3|NCBP2', 'ENSG00000114503|ENST00000321256|NCBP2', 'ENST00000468923.5_1_3:196664263-196669374:-|nuORF'] 292 9884 AAHIFNEAL True NCI_RA007_Epitope_Rep3 984.50288029264 984.50178993586 45.954 2 0.1659233881978369 0.0007088331515812432 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 29665 10925 FVNDIFER True H1975_Epitope_Rep1 1038.5134449763398 1038.5123499358601 46.986 2 0.1659180390615447 0.0007088331515812432 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 11750 15654 DHIAHIIEL True PC9_epitope_Rep2 1059.57129420563 1059.57018993586 65.489 2 0.1659176876915152 0.0007088331515812432 0.9438714419765777 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 57024 2758 LEEEPRGPP True H1975_Epitope_Rep2 1022.5032742154598 1022.50216993586 14.637 2 0.16591441518165354 0.0007088331515812432 0.9438714419765777 ['ENSG00000213015|ENST00000325333|ZNF580'] 76812 16578 NVELDPEIQ True PC9_epitope_Rep3 1055.51350454599 1055.51297496793 68.905 1 0.16590876934206014 0.0007088331515812432 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 77462 14787 NYPETLGRLLI True NCI_RA007_Epitope_Rep3 1287.7186867153098 1287.7175899358601 65.587 2 0.16590274172428643 0.0007088331515812432 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 64119 17902 LQEEPVEGF True PC9_epitope_Rep1 1046.49204082542 1046.49094993586 73.652 2 0.16589687129493164 0.0007088331515812432 0.9438714419765777 ['ENSG00000107341|ENST00000263228|UBE2R2', 'ENST00000586788.1_1_19:531880-536341:+|nuORF', 'ENSG00000099804|ENST00000215574|CDC34'] 94962 14415 RYPTSIASL True PC9_epitope_Rep2 1006.5447451046199 1006.54364993586 60.716 2 0.1658966606749132 0.0007088331515812432 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 34738 4828 GQNPTNAEVLK True NCI_RA007_Epitope_Rep5 1169.6040508858898 1169.6029499358601 25.261 2 0.16588722353861005 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 135933 12130 YEWVNPAA True H1975_Epitope_Rep2 948.4341320264798 948.4335849679301 51.743 1 0.16588715672890547 0.0007088331515812432 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 102592 17865 SQANRLFYL True PC9_epitope_Rep4 1110.5821932425 1110.58108993586 76.758 2 0.16588560961746285 0.0007088331515812432 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 92349 7380 RQPDSGISSI True PC9_epitope_Rep6 1058.5356369729 1058.53452993586 37.595 2 0.16586495682078883 0.0007088331515812432 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 7849 6908 ATAIGMPVEK True NCI_RA007_Epitope_Rep5 1015.5372171960299 1015.5361099358599 33.258 2 0.1658622524262168 0.0007088331515812432 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 75122 19902 NMVDIIHSV True PC9_epitope_Rep3 1026.51681610462 1026.51570993586 81.794 2 0.16586081316757512 0.0007088331515812432 0.9438714419765777 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 27631 21337 FQAEIAQLM True PC9_epitope_Rep3 1049.52156713189 1049.52046993586 87.368 2 0.16586078667176038 0.0007088331515812432 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 106000 18741 SVLKSLVEI True PC9_epitope_Rep4 986.6011973515799 986.60010993586 80.171 2 0.16585440997850737 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 40297 12666 HRQEIQVVL True PC9_epitope_Rep5 1120.63529144452 1120.6341899358601 53.724 2 0.1658531260839828 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 48165 12373 KASDLYITL True NCI_RA007_Epitope_Rep4 1022.56481184286 1022.56427496793 54.589 1 0.16584387763495687 0.0007088331515812432 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2'] 130604 16844 VVAEELENV True PC9_epitope_Rep5 1000.50769088956 1000.50658993586 69.8 2 0.1658370968660035 0.0007088331515812432 0.9438714419765777 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.R96H|1|0.24|ENSG00000167196|chr15:75913210-75913210|G/A|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 132988 8874 VYVERAEVL True NCI_RA007_Epitope_Rep5 1076.5866099165999 1076.58550993586 40.798 2 0.16582357177869045 0.0007088331515812432 0.9438714419765777 ['ENSG00000089234|ENST00000419234|BRAP'] 52014 12707 KLFDDKLQNC True PC9_epitope_Rep5 1222.60160835774 1222.59997490379 53.883 3 0.16582156106684082 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'ENST00000524620.1_1_1:52211285-52225200:+|nuORF', 'ENST00000484890.5_1_1:52211210-52222042:+|nuORF', 'ENST00000473207.6_1_1:52195646-52226369:+|nuORF'] 21278 17227 ERINNINIL True PC9_epitope_Rep5 1097.61930702721 1097.61820993586 71.281 2 0.16582129709676185 0.0007088331515812432 0.9438714419765777 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 26018 10277 FHDESTQVQL True PC9_epitope_Rep6 1202.5567663402999 1202.5556699358601 50.217 2 0.1658202035822819 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 40606 10947 HTDSLHLLI True H1975_Epitope_Rep3 1047.57129420563 1047.57018993586 47.194 2 0.16581866164414988 0.0007088331515812432 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 75856 9179 NRDLSTPGL True PC9_epitope_Rep4 971.5036085686299 971.50250993586 42.901 2 0.16581611815710418 0.0007088331515812432 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 21127 6380 ERDQAVQAL True PC9_epitope_Rep4 1028.5250722891997 1028.5239699358601 31.627 2 0.16581143370106052 0.0007088331515812432 0.9438714419765777 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 74673 23445 NLIDLDDLYV True PC9_epitope_Rep3 1191.6023195503901 1191.6012299358601 95.457 2 0.16580720980646071 0.0007088331515812432 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 35234 7480 GSHSMRYFYT True NCI_RA007_Epitope_Rep4 1247.5393424543497 1247.5382499358602 35.417 2 0.16580153140924284 0.0007088331515812432 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 88668 8061 RAYDGTTYL True H1975_Epitope_Rep1 1058.50327421546 1058.5021699358601 35.95 2 0.16580081841362526 0.0007088331515812432 0.9438714419765777 ['ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39'] 90382 22259 RILDIDIPLSV True PC9_epitope_Rep1 1252.7390878067201 1252.73798993586 90.436 2 0.1657900104531543 0.0007088331515812432 0.9438714419765777 ['ENSG00000115112|ENST00000263707|TFCP2L1'] 86978 14415 QRVPLSVQL True PC9_epitope_Rep6 1038.61857875122 1038.61748993586 67.345 2 0.16578481100047152 0.0007088331515812432 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 30140 15025 FYQPKIQQF True PC9_epitope_Rep6 1197.61824439805 1197.6171499358602 69.818 2 0.16578419271388004 0.0007088331515812432 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 76121 13536 NRPNLYYEV True PC9_epitope_Rep2 1166.57202248162 1166.57092993586 57.359 2 0.16577660522872809 0.0007088331515812432 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 64311 22558 LQMEQLNGILL True PC9_epitope_Rep2 1270.69550874258 1270.6944099358602 92.262 2 0.16577605784003943 0.0007088331515812432 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000510488.1_1_3:141189685-141190057:-|nuORF', 'ENST00000504966.2_1_4:145493783-145493942:+|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'ENST00000565278.1_1_16:72763309-72763579:+|nuORF'] 77177 22799 NYGDYFNVF True PC9_epitope_Rep5 1137.47672511445 1137.47562993586 92.687 2 0.1657748024965189 0.0007088331515812432 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 131951 11065 VYFSKSEQL True PC9_epitope_Rep4 1099.5549754351498 1099.5538699358601 50.338 2 0.16577388554889835 0.0007088331515812432 0.9438714419765777 ['ENSG00000142627|ENST00000358432|EPHA2'] 89309 8840 RELVKNWVP True H1975_Epitope_Rep2 1139.64512785223 1139.64402993586 38.97 2 0.1657727298578328 0.0007088331515812432 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 7117 5128 AQYEEIAQR True H1975_Epitope_Rep2 1106.5356369728997 1106.53452993586 24.8 2 0.16576736187765287 0.0007088331515812432 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6C|p.R349Q|1|0.16|ENSG00000170465|chr12:52471163-52471163|C/T|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 132906 12608 VYTTTVHWL True NCI_RA007_Epitope_Rep5 1118.5760452329 1118.57494993586 55.15 2 0.16576643761003784 0.0007088331515812432 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 73891 4939 NHHLQETSF True PC9_epitope_Rep4 1111.50467119779 1111.50356993586 25.601 2 0.16575622619327884 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 91053 21599 RLLDVLAPL True PC9_epitope_Rep5 1008.6331661861999 1008.63206993586 88.12 2 0.16575384385958175 0.0007088331515812432 0.9438714419765777 ['ENSG00000182871|ENST00000651438|COL18A1'] 138429 19920 YRDWFSSQL True PC9_epitope_Rep2 1200.55637241748 1200.55526993586 82.019 2 0.1657532390359033 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2', 'ENST00000522359.2_1_11:61630757-61632750:+|nuORF'] 72357 8580 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46397496793 37.956 1 0.1657529870113026 0.0007088331515812432 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 123623 15311 VILEGELERA True PC9_epitope_Rep3 1127.6186383208699 1127.61754993586 64.045 2 0.1657447953350922 0.0007088331515812432 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 7476 8960 ASDRNIVLY True H1975_Epitope_Rep2 1049.5505587610498 1049.54946993586 39.419 2 0.16573879734261307 0.0007088331515812432 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13'] 87372 6229 QTDKLKELY True H1975_Epitope_Rep1 1136.6077392839998 1136.6060849037901 29.028 3 0.1657359760746659 0.0007088331515812432 0.9438714419765777 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 6286 6195 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 28.644 2 0.1657349926059834 0.0007088331515812432 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 72474 16760 MVADKFTEL True PC9_epitope_Rep1 1052.52123277872 1052.5206749679298 69.292 1 0.16573153765289528 0.0007088331515812432 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 8933 9118 AVGLVLPAK True NCI_RA007_Epitope_Rep4 866.5589386167799 866.5583949679301 41.913 1 0.16572314684391837 0.0007088331515812432 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 63286 6750 LPASNLAGKEA True PC9_epitope_Rep4 1069.57677350889 1069.57566993586 33.159 2 0.16571831223883685 0.0007088331515812432 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 40353 5536 HRTDSEIAL True PC9_epitope_Rep6 1040.5250722892 1040.5239699358601 29.31 2 0.1657178325576564 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 116936 17428 TYPENWRAF True PC9_epitope_Rep2 1182.5458077337798 1182.54470993586 72.289 2 0.16570637072471056 0.0007088331515812432 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 105142 15176 STLTEEGVIKV True PC9_epitope_Rep2 1174.64451871554 1174.64342993586 63.632 2 0.16570363834830068 0.0007088331515812432 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 104729 9281 STDKAEYTFY True H1975_Epitope_Rep2 1223.53463391339 1223.53352993586 40.657 2 0.16570102519897048 0.0007088331515812432 0.9438714419765777 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 35493 8418 GTFLEGVAK True NCI_RA007_Epitope_Rep3 920.4967322830398 920.49562993586 40.203 2 0.1656996832972882 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11', 'ENST00000593233.1_1_19:5894755-5901370:-|nuORF', 'ENSG00000174886|ENST00000308961|NDUFA11'] 139305 8498 YTDMESEDY True H1975_Epitope_Rep1 1151.39648575807 1151.39538993586 37.617 2 0.16569826808384083 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 88419 12462 QYSDINNRW True PC9_epitope_Rep3 1194.5417849825 1194.5406899358602 52.959 2 0.16569440147680706 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 35357 15724 GTAGLLEQWLK True NCI_RA007_Epitope_Rep4 1214.66592286646 1214.66482993586 68.287 2 0.16568586021925114 0.0007088331515812432 0.9438714419765777 ['HMCES|p.E162Kfs*13|1|0.24|ENSG00000183624|chr3:129298384-129298386|GAG/AA|frameshift_variant', 'ENSG00000183624|ENST00000383463|HMCES'] 17755 6154 EHTQTVSQL True PC9_epitope_Rep1 1041.50908787189 1041.50798993586 28.486 2 0.16567617954238148 0.0007088331515812432 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 23866 13537 EYMEHVYLI True NCI_RA007_Epitope_Rep4 1195.5583465634297 1195.55724993586 59.277 2 0.1656700074214389 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 123428 5100 VIDYNGER True NCI_RA007_Epitope_Rep2 964.4614094034799 964.46030993586 24.462 2 0.16566977332609562 0.0007088331515812432 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 54169 9960 KYPDAVATW True NCI_RA007_Epitope_Rep3 1049.51819600361 1049.5170899358602 46.262 2 0.16566147962656938 0.0007088331515812432 0.9438714419765777 ['CON__P31096', 'ENST00000505146.1_1_4:88898047-88901296:+|nuORF', 'ENST00000508002.5_1_4:88896921-88901631:+|nuORF', 'nc|ENSG00000118785|P10451-4|SPP1', 'nc|ENSG00000118785|P10451-5|SPP1', 'ENSG00000118785|ENST00000395080|SPP1', 'ENST00000509659.5_1_4:88898870-88904045:+|nuORF'] 70781 7866 MEEKYIVSA True H1975_Epitope_Rep2 1068.5161473982798 1068.5150499358601 35.202 2 0.16566108865766774 0.0007088331515812432 0.9438714419765777 ['ENSG00000168172|ENST00000307602|HOOK3'] 124413 6385 VLEGM[Oxidation]EVVR True NCI_RA007_Epitope_Rep2 1046.5430312328997 1046.54192993586 29.444 2 0.1656559450234846 0.0007088331515812432 0.9438714419765777 ['ENSG00000166794|ENST00000300026|PPIB', 'CSNK1G1-PPIB|1|fusion'] 109843 13099 THLLNQDTL True PC9_epitope_Rep3 1053.54547338061 1053.54436993586 55.409 2 0.16565544830428142 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 5764 10871 APEEHPVLL True PC9_epitope_Rep6 1003.5338460677498 1003.53274993586 52.675 2 0.1656544907133229 0.0007088331515812432 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 53411 21976 KVFELDLVTL True PC9_epitope_Rep5 1175.6801759482698 1175.67906993586 89.561 2 0.16564896827671535 0.0007088331515812432 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 31794 12263 GELVGGLDIVK True NCI_RA007_Epitope_Rep1 1098.62847472858 1098.62736993586 51.67 2 0.1656437353947201 0.0007088331515812432 0.9438714419765777 ['ENSG00000108010|ENST00000331244|GLRX3', 'ENST00000405027.1_1_6:3978829-3979330:+|nuORF'] 35388 6998 GTDDGKVGLY True H1975_Epitope_Rep3 1023.48728979815 1023.4861899358599 31.881 2 0.1656432523661054 0.0007088331515812432 0.9438714419765777 ['ENSG00000082516|ENST00000285873|GEMIN5', 'GEMIN5|p.E1125Sfs*36|1|0.24|ENSG00000082516|chr5:154896316-154896316|C/-|frameshift_variant', 'GEMIN5|p.P480Hfs*63|1|0.14|ENSG00000082516|chr5:154921368-154921368|C/-|frameshift_variant'] 43524 20173 IIDGKIFCV True PC9_epitope_Rep5 1006.5521389841799 1006.55104993586 82.643 2 0.16563927117670343 0.0007088331515812432 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 4571 15515 ALAAALAHI True PC9_epitope_Rep4 849.50723739709 849.50614993586 67.604 2 0.16563453402539186 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21', 'ENSG00000107625|ENST00000373585|DDX50'] 1544 11511 AEEVAPPLP True H1975_Epitope_Rep2 921.4807478657299 921.4801949679301 49.335 1 0.16562916151432377 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1', 'ENST00000522774.1_1_8:37728794-37730726:-|nuORF'] 101108 23398 SLVELLNQI True PC9_epitope_Rep1 1027.5913609438699 1027.59026993586 94.784 2 0.16562860377373104 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 1458 6062 AEELASGHLA True H1975_Epitope_Rep3 996.4876241513199 996.48652993586 28.328 2 0.16562116112713296 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 100435 14156 SLPEELNRV True PC9_epitope_Rep5 1055.56112344475 1055.56002993586 59.462 2 0.1656204018850625 0.0007088331515812432 0.9438714419765777 ['ENSG00000137815|ENST00000389629|RTF1', 'NUSAP1-RTF1|1|fusion'] 70383 20051 LYQEIIHYF True PC9_epitope_Rep4 1224.61791004488 1224.6168099358601 85.264 2 0.16561079065222575 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 103669 6368 SRDPSTNVI True PC9_epitope_Rep2 987.49852318819 987.4974299358599 29.899 2 0.16560102619881953 0.0007088331515812432 0.9438714419765777 ['ENSG00000014824|ENST00000264451|SLC30A9', 'ENST00000509683.5_1_4:42065060-42077708:+|nuORF'] 76793 5794 NVDPVQHTY True H1975_Epitope_Rep2 1071.4985231881901 1071.49742993586 27.276 2 0.16559076360972336 0.0007088331515812432 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 21020 12785 ERATNIEVL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 54.052 2 0.16558518070798037 0.0007088331515812432 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 105557 9357 SVDSHFQEV True PC9_epitope_Rep2 1046.4668887067398 1046.4657899358601 41.328 2 0.16558365340087244 0.0007088331515812432 0.9438714419765777 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 70986 6405 M[Oxidation]EQLLSQGHQP True H1975_Epitope_Rep1 1282.5975859869 1282.59648993586 29.696 2 0.16558314976054903 0.0007088331515812432 0.9438714419765777 ['ENST00000418087.1_1_3:171455845-171489014:-|nuORF'] 35797 5523 GTYAPAEVPK True NCI_RA007_Epitope_Rep3 1031.5287606873098 1031.52766993586 28.723 2 0.16558178633322998 0.0007088331515812432 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENST00000460124.5_1_10:5042672-5046051:-|nuORF', 'ENSG00000187134|ENST00000380872|AKR1C1', 'ENST00000477661.1_1_10:5005492-5009304:+|nuORF', 'nc|ENSG00000151632|P52895-2|AKR1C2'] 106725 19185 SYDHVELTF True PC9_epitope_Rep5 1109.5029398622898 1109.50184993586 78.833 2 0.16557736642088983 0.0007088331515812432 0.9438714419765777 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2', 'ENST00000589834.1_1_17:73845679-73851408:-|nuORF', 'ENST00000590450.5_1_17:73845072-73851378:-|nuORF', 'ENST00000589241.5_1_17:73844624-73851319:-|nuORF', 'ENST00000587642.5_1_17:73844624-73847864:-|nuORF', 'nc|ENSG00000132471|Q969T9-2|WBP2', 'ENST00000592802.1_1_17:73847561-73851408:-|nuORF'] 2280 9207 AEPLEPTRPLP True H1975_Epitope_Rep2 1218.66083748602 1218.6597499358602 40.368 2 0.16557488442487917 0.0007088331515812432 0.9438714419765777 ['ENSG00000125966|ENST00000246186|MMP24'] 9436 6853 AVVTQVNKV True PC9_epitope_Rep1 956.5654805492 956.56438993586 31.165 2 0.1655705340259001 0.0007088331515812432 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 138487 15909 YRGQFPEL True PC9_epitope_Rep5 1008.5028802926398 1008.50178993586 66.186 2 0.1655675965609181 0.0007088331515812432 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 8626 8305 AVALPLQTK True NCI_RA007_Epitope_Rep4 939.57531695691 939.57420993586 38.757 2 0.16556163291400594 0.0007088331515812432 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 41972 9919 IEDFEARIA True H1975_Epitope_Rep2 1062.53457434374 1062.53346993586 43.142 2 0.16555110531841388 0.0007622781226178808 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 47658 12663 IYPPKLHQF True PC9_epitope_Rep5 1141.62841515893 1141.62676490379 53.712 3 0.1655506237711752 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 87040 6171 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 28.709 2 0.16554196967796922 0.0007622781226178808 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 102471 7545 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 34.387 2 0.1655388947395168 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 61588 18998 LLGPRLVLA True PC9_epitope_Rep2 950.6276868829399 950.62658993586 78.442 2 0.16553794230497915 0.0007622781226178808 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 64522 11851 LRDAVPATL True PC9_epitope_Rep2 954.5498304850599 954.54872993586 50.913 2 0.16553660143223312 0.0007622781226178808 0.9438714419765777 ['ENSG00000172922|ENST00000308418|RNASEH2C', 'ENST00000528220.1_1_11:65487749-65488268:-|nuORF'] 108348 4973 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 24.214 2 0.16553519484676135 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 22129 9920 ESYSIYVYK True H1975_Epitope_Rep1 1150.55464108198 1150.55354993586 43.093 2 0.16553292666694924 0.0007622781226178808 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 110649 19280 TIVNELVRV True PC9_epitope_Rep1 1041.61824439805 1041.6171499358602 78.963 2 0.16553221421755193 0.0007622781226178808 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 60118 19870 LHVGDAILAV True PC9_epitope_Rep3 1006.58113061334 1006.58002993586 81.666 2 0.16552877123390727 0.0007622781226178808 0.9438714419765777 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC'] 97786 16357 SHIFEVQAL True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 75.295 2 0.16552723705512598 0.0007622781226178808 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1'] 89584 4170 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 22.34 2 0.1655164504275104 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 41079 19011 HYLDTTTLI True PC9_epitope_Rep5 1075.55497543515 1075.5538699358601 78.151 2 0.16551564157157983 0.0007622781226178808 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 77467 15480 NYPETLGRLLI True NCI_RA007_Epitope_Rep5 1287.7186867153098 1287.7175899358601 66.239 2 0.16551520086238003 0.0007622781226178808 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 102433 12264 SPVYVGRVV True PC9_epitope_Rep5 974.5549158654999 974.55380993586 52.162 2 0.16551479482108666 0.0007622781226178808 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 17718 16234 EHSLVIDTL True PC9_epitope_Rep4 1025.53932537101 1025.5387749679298 70.386 1 0.16551062263834151 0.0007622781226178808 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 127954 10214 VRPPVQVY True PC9_epitope_Rep4 956.5443511817998 956.54324993586 46.965 2 0.16551020417729492 0.0007622781226178808 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 42209 7762 IEGQGVFREA True NCI_RA007_Epitope_Rep5 1104.55637241748 1104.55526993586 36.554 2 0.16550966471084813 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 17333 5741 EHDPVGQM[Oxidation]V True PC9_epitope_Rep1 1026.4440454676198 1026.44294993586 26.9 2 0.16550577340604503 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 54361 14000 KYQEVTNNLEF True PC9_epitope_Rep6 1383.6670450652698 1383.66594993586 65.708 2 0.16549646580140587 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 45163 18574 IRDNFVIVY True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 79.521 2 0.1654964119348376 0.0007622781226178808 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 138221 15704 YQTEIGQTL True PC9_epitope_Rep2 1051.51858992643 1051.51748993586 65.68 2 0.1654873975617609 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 4955 20114 ALIDRMVNL True PC9_epitope_Rep5 1043.57975071435 1043.57864993586 82.415 2 0.16548603531629077 0.0007622781226178808 0.9438714419765777 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 24237 18595 EYVVRTFTL True PC9_epitope_Rep4 1126.60225998074 1126.60116993586 79.602 2 0.16548175485410735 0.0007622781226178808 0.9438714419765777 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 76597 5932 NTEVLKNM[Oxidation]GY True H1975_Epitope_Rep2 1183.5543241925898 1183.5532299358601 27.802 2 0.16548102971497594 0.0007622781226178808 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B'] 99057 12484 SKVSILESL True NCI_RA007_Epitope_Rep1 974.56481184286 974.56370993586 52.537 2 0.16547783380558467 0.0007622781226178808 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 106934 18909 SYKNGFLNL True PC9_epitope_Rep1 1054.54474510462 1054.54364993586 77.519 2 0.16547485767177492 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 43247 12491 IHDGAAPISL True PC9_epitope_Rep4 992.52909504048 992.52798993586 55.855 2 0.16547361628902163 0.0007870916961826052 0.9438714419765777 ['ENSG00000142798|ENST00000374695|HSPG2'] 64326 9554 LQNEPLPERL True NCI_RA007_Epitope_Rep4 1207.6560864587498 1207.6549899358602 43.597 2 0.16546250274357835 0.0007870916961826052 0.9438714419765777 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 18762 10962 ELDPQSSNLY True H1975_Epitope_Rep2 1164.52988288612 1164.52878993586 47.194 2 0.16546023314941127 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000153029|Q95460-2|MR1', 'ENSG00000153029|ENST00000367580|MR1'] 28751 15433 FTADPLSL True H1975_Epitope_Rep2 862.4436340810199 862.4430849679301 64.52 1 0.16545217026488332 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1', 'ENST00000544721.5_1_11:72396711-72399699:-|nuORF', 'ENST00000465814.5_1_11:72396711-72407721:-|nuORF'] 15204 12554 EAFNMIDQNR True PC9_epitope_Rep2 1236.5557207944798 1236.55462993586 53.597 2 0.16544681884382695 0.0007870916961826052 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 131501 18919 VVVDPIQSV True PC9_epitope_Rep2 954.53859709502 954.53750993586 78.136 2 0.16544655652464474 0.0007870916961826052 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 101711 4833 SPGLQKEAV True PC9_epitope_Rep4 927.5025459394699 927.50144993586 25.174 2 0.16544333494651875 0.0007870916961826052 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 104293 9652 SSEEQSLYY True H1975_Epitope_Rep1 1104.46113461996 1104.4600299358601 42.055 2 0.16543660676588431 0.0007870916961826052 0.9438714419765777 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 73320 11650 NELESYAYSLK True NCI_RA007_Epitope_Rep2 1315.62959692739 1315.6284899358602 49.908 2 0.16543238279127478 0.0007870916961826052 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 1948 12340 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47456993586 52.55 2 0.1654319073578406 0.0007870916961826052 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 44693 17651 IPNPAQTSVVV True PC9_epitope_Rep2 1123.62372370131 1123.62262993586 73.174 2 0.16542614196392805 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 70814 10934 MEENFAVEA True H1975_Epitope_Rep3 1038.4328116971399 1038.43227496793 47.145 1 0.16542368820194253 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 27405 7342 FNDPNAKEM True PC9_epitope_Rep3 1064.45969515132 1064.4585899358601 33.25 2 0.16541909042589176 0.0007870916961826052 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 124256 18774 VLDDIQDLIY True H1975_Epitope_Rep2 1205.61796961453 1205.6168699358602 77.946 2 0.16540943862595 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF'] 28161 19656 FRMDIEQSL True PC9_epitope_Rep3 1137.54884450889 1137.54774993586 80.842 2 0.1654081335345135 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 116126 6620 TVSSLQESGLK True NCI_RA007_Epitope_Rep1 1147.60846755999 1147.60736993586 29.762 2 0.16540335342263787 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 27822 20678 FQIIQSIRMGM True PC9_epitope_Rep2 1322.6838985130598 1322.6828099358602 84.974 2 0.1653984521731177 0.0007870916961826052 0.9438714419765777 ['ENSG00000120742|ENST00000239944|SERP1', 'ENSG00000151778|ENST00000379179|SERP2'] 23731 20290 EYIPDLYNHF True PC9_epitope_Rep2 1309.5979028762897 1309.5968099358602 83.467 2 0.16539746524697718 0.0007870916961826052 0.9438714419765777 ['ENSG00000011454|ENST00000373647|RABGAP1', 'ENST00000474707.1_1_9:125835857-125839047:+|nuORF'] 83739 5988 QEDAQRLYQA True H1975_Epitope_Rep2 1220.57856441404 1220.57746993586 28.011 2 0.16539531153565257 0.0007870916961826052 0.9438714419765777 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 76605 8624 NTFSVVPSPK True H1975_Epitope_Rep3 1074.5709598524597 1074.5698699358602 38.165 2 0.1653884788607314 0.0007870916961826052 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 132531 19370 VYPGDPLRF True PC9_epitope_Rep3 1062.5498304850598 1062.5487299358601 79.73 2 0.16538460049645115 0.0007870916961826052 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 103681 12980 SRDPVQLNL True PC9_epitope_Rep6 1040.56145779792 1040.56036993586 61.502 2 0.16537798166708745 0.0007870916961826052 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 70927 15152 MELITPISA True H1975_Epitope_Rep2 973.5154191222899 973.51432993586 63.437 2 0.16536565280021362 0.0007870916961826052 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 110019 10580 THTTPVLL True PC9_epitope_Rep4 880.5018176634799 880.50072993586 48.437 2 0.16536063120383404 0.0007870916961826052 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 123892 6324 VKGDVDVSLPK True H1975_Epitope_Rep1 1155.6499384491499 1155.6482849037902 29.389 3 0.16536014371418836 0.0007870916961826052 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant'] 38183 7223 HESDFSGVTP True H1975_Epitope_Rep3 1074.4618033263 1074.4607099358602 32.756 2 0.16535970862985563 0.0007870916961826052 0.9438714419765777 ['ENSG00000096401|ENST00000371477|CDC5L'] 39777 12952 HQDLSTPVL True PC9_epitope_Rep2 1008.52400966004 1008.52290993586 55.112 2 0.16535370309110034 0.0007870916961826052 0.9438714419765777 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 61375 7587 LLEKEREDLY True H1975_Epitope_Rep1 1306.6768814729799 1306.67524490379 34.176 3 0.16534728017928488 0.0007870916961826052 0.9438714419765777 ['ENSG00000102189|ENST00000322349|EEA1'] 66158 13713 LSPEELLLR True H1975_Epitope_Rep3 1068.6179100448799 1068.6168099358601 58.043 2 0.1653468105934655 0.0007870916961826052 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'ENSG00000120756|ENST00000457734|PLS1'] 116952 16957 TYPIKTPTF True PC9_epitope_Rep3 1066.5698972233001 1066.5688099358601 70.386 2 0.1653378785018344 0.0007870916961826052 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 25492 12568 FEPPETPVV True H1975_Epitope_Rep2 1013.50696261357 1013.50586993586 53.437 2 0.16533291115405002 0.0007870916961826052 0.9438714419765777 ['ENSG00000184371|ENST00000329608|CSF1', 'nc|ENSG00000184371|P09603-2|CSF1'] 71380 11291 MIDPSGVSY True H1975_Epitope_Rep2 967.4320834211501 967.43153496793 48.478 1 0.16533228167833042 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 17560 13191 EHIVPNAEL True PC9_epitope_Rep1 1020.52400966004 1020.52290993586 55.603 2 0.1653317617092936 0.0007870916961826052 0.9438714419765777 ['ENSG00000120129|ENST00000239223|DUSP1'] 73478 10731 NEVTDYAIA True H1975_Epitope_Rep3 994.46074069714 994.4596499358599 46.355 2 0.16532717543418118 0.0007870916961826052 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 109604 9274 THDEAVQVL True PC9_epitope_Rep4 1010.5032742154598 1010.50216993586 43.276 2 0.16532102135583118 0.0007870916961826052 0.9438714419765777 ['ENSG00000101400|ENST00000217381|SNTA1', 'SNTA1|p.G203Afs*15|1|0.32|ENSG00000101400|chr20:33417812-33417812|C/-|frameshift_variant', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 75741 18395 NRAATLMML True PC9_epitope_Rep1 1019.5256069665099 1019.52450993586 75.546 2 0.1653208801855368 0.0007870916961826052 0.9438714419765777 ['ENSG00000168259|ENST00000457167|DNAJC7', 'nc|ENSG00000168259|Q99615-2|DNAJC7'] 42470 4340 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 21.81 2 0.1653168198417145 0.0007870916961826052 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 98030 15177 SHTDVVPVF True PC9_epitope_Rep4 999.50254593947 999.50144993586 66.304 2 0.1653130454610298 0.0007870916961826052 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 4262 21313 AIIGGMFTV True PC9_epitope_Rep4 907.48372507119 907.48317496793 90.147 1 0.1653097636063668 0.0007870916961826052 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 137167 15153 YLDQMEDLY True H1975_Epitope_Rep1 1188.50089125696 1188.49978993586 63.545 2 0.1653093116369152 0.0007870916961826052 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3'] 61158 10397 LLDIRSEY True H1975_Epitope_Rep1 1007.5287606873101 1007.52766993586 44.941 2 0.16530255127016938 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 22408 16372 ETEYSFLDY True H1975_Epitope_Rep2 1165.4815357113698 1165.48042993586 68.195 2 0.16529560543070135 0.0007870916961826052 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 127518 22992 VQVEDIVFL True PC9_epitope_Rep5 1060.580461907 1060.57987496793 93.43 1 0.16529181993201875 0.0007870916961826052 0.9438714419765777 ['ENSG00000197780|ENST00000338366|TAF13'] 109655 5637 THDQAVQAL True PC9_epitope_Rep4 981.4879585044899 981.48686993586 28.479 2 0.165284453745313 0.0007870916961826052 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 40749 14660 HTVGELIEV True PC9_epitope_Rep6 995.5287606873098 995.52766993586 68.314 2 0.1652781775448034 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 87474 13767 QTETGTPYMLY True H1975_Epitope_Rep2 1302.5802042068199 1302.57967496793 58.1 1 0.16527676482392328 0.0007870916961826052 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 37530 21438 GYLPNQLFRTF True PC9_epitope_Rep1 1354.70337100434 1354.7022699358602 87.3 2 0.16526893101958326 0.0007870916961826052 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1'] 76292 13484 NSDVSLLNY True H1975_Epitope_Rep1 1023.48728979815 1023.4861899358599 56.985 2 0.1652648364375388 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 52499 11739 KPNPNQIISV True PC9_epitope_Rep2 1108.62405805448 1108.62296993586 50.488 2 0.16526480610257055 0.0007870916961826052 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 31682 6070 GEIESKFNQA True H1975_Epitope_Rep2 1121.53530261973 1121.53477496793 28.325 1 0.16525580318616945 0.0007870916961826052 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 6922 18864 AQLELISRL True PC9_epitope_Rep2 1041.61824439805 1041.6171499358602 77.926 2 0.16525244818523954 0.0007870916961826052 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 107308 13131 SYREDPIVY True PC9_epitope_Rep1 1140.5451390274397 1140.5440499358601 55.376 2 0.1652494810974291 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 33051 7923 GKDGYNYTL True NCI_RA007_Epitope_Rep4 1029.47672511445 1029.47562993586 37.22 2 0.16524117293971308 0.0007870916961826052 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 131097 15064 VVMQEGLAHI True PC9_epitope_Rep2 1095.5746653339097 1095.5735699358602 63.201 2 0.16523715548880213 0.0007870916961826052 0.9438714419765777 ['ENSG00000152684|ENST00000274311|PELO'] 46754 4671 IVAVTGAEAQK True H1975_Epitope_Rep3 1085.6080736371698 1085.6069699358602 23.09 2 0.16521731371891515 0.0007870916961826052 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'ENST00000569825.1_1_16:70287541-70292096:-|nuORF'] 96325 9849 SEEWADNHLP True H1975_Epitope_Rep2 1196.50981614788 1196.50870993586 42.87 2 0.16521706972903347 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 31752 7945 GELERALSA True H1975_Epitope_Rep3 944.4927095317598 944.49160993586 35.53 2 0.16521020656765825 0.0007870916961826052 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G'] 35450 7654 GTEFGGSIYQK True NCI_RA007_Epitope_Rep4 1185.56660274801 1185.56550993586 36.095 2 0.1652085588364268 0.0007870916961826052 0.9438714419765777 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000489906.5_1_5:133308464-133311792:-|nuORF', 'nc|ENSG00000165637|P45880-2|VDAC2', 'ENSG00000078668|ENST00000022615|VDAC3', 'nc|ENSG00000078668|Q9Y277-2|VDAC3', 'ENSG00000165637|ENST00000332211|VDAC2', 'nc|ENSG00000165637|P45880-1|VDAC2'] 102576 16685 SQANIAQVL True PC9_epitope_Rep4 942.5134449763399 942.51234993586 72.153 2 0.16520679671039684 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 28604 12592 FSQPENQNLLY True H1975_Epitope_Rep3 1351.64083031743 1351.63972993586 53.637 2 0.16519903991029822 0.0007870916961826052 0.9438714419765777 ['ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-3|FANCD2'] 113689 8054 TRDETNYGI True PC9_epitope_Rep2 1067.4883524273098 1067.48724993586 36.339 2 0.16519420938256696 0.0007870916961826052 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 36837 12421 GVPSTAIREI True PC9_epitope_Rep2 1041.5818588893299 1041.5807699358602 53.085 2 0.1651932146850722 0.0007870916961826052 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'nc|ENSG00000123374|P24941-2|CDK2'] 108438 5617 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 26.605 2 0.16519174997402225 0.0007870916961826052 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 74191 10966 NHYTESISV True PC9_epitope_Rep5 1048.48253877088 1048.4814499358602 47.169 2 0.16518981008237543 0.0007870916961826052 0.9438714419765777 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31827498-31827900:-|nuORF'] 33716 7384 GLQVVAVK True NCI_RA007_Epitope_Rep2 812.5119884243599 812.51088993586 33.346 2 0.16518604154885214 0.0007870916961826052 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30260216-30260456:-|nuORF', 'ENSG00000083457|ENST00000263087|ITGAE'] 117845 9647 VAPEEHPVLL True H1975_Epitope_Rep3 1102.60225998074 1102.60116993586 42.123 2 0.1651848489683348 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 72365 8558 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep3 1128.4645061286797 1128.46397496793 37.907 1 0.16518362034319473 0.0007870916961826052 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 6937 18718 AQLPALWKA True PC9_epitope_Rep1 996.5756513100799 996.57454993586 76.789 2 0.16518209981330514 0.0007870916961826052 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2', 'ENST00000588777.1_1_19:12986806-12989487:-|nuORF'] 38763 13025 HHYEGAVVIL True PC9_epitope_Rep2 1136.5978433066398 1136.59674993586 55.381 2 0.16518159323844908 0.0007870916961826052 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 97613 14980 SHAENILQI True PC9_epitope_Rep2 1023.53490869691 1023.53380993586 62.877 2 0.16517908041616228 0.0007870916961826052 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 131506 17017 VVVDPIQSV True PC9_epitope_Rep6 954.53859709502 954.53750993586 78.01 2 0.16517360051717003 0.0007870916961826052 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 40176 17313 HRFPFSSAL True PC9_epitope_Rep5 1060.5454138109599 1060.5443099358602 71.596 2 0.1651735996644446 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 75779 4436 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 24.216 2 0.16517252813051608 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 28062 15633 FRDHLEEVL True PC9_epitope_Rep5 1156.58767254576 1156.58602490379 65.143 3 0.16516808909373212 0.0007870916961826052 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 92443 14570 RQVEDLQATF True PC9_epitope_Rep5 1205.6040508858898 1205.6029499358601 61.042 2 0.16515265845869348 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 135190 10510 YAVEGRDL True PC9_epitope_Rep3 921.4555957470499 921.45448993586 45.364 2 0.16515168436515845 0.0007870916961826052 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 86703 7369 QRIDSDDAL True PC9_epitope_Rep2 1031.4883524273098 1031.48724993586 33.727 2 0.16515167569038433 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 34617 19487 GQIDLLERL True PC9_epitope_Rep4 1055.59750895347 1055.59640993586 83.073 2 0.16514857622090856 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 86300 20986 QQFQEPFVAV True PC9_epitope_Rep1 1191.59242357303 1191.5913299358601 85.548 2 0.16514759961742806 0.0007870916961826052 0.9438714419765777 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67958045-67971691:-|nuORF'] 9883 23794 AYNDNWFITF True PC9_epitope_Rep1 1289.57168812845 1289.5705899358602 96.321 2 0.16514344738105233 0.0007870916961826052 0.9438714419765777 ['ENSG00000107929|ENST00000316157|LARP4B', 'LARP4B|p.S572Lfs*24|1|0.11|ENSG00000107929|chr10:815015-815052|GGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCT/-|frameshift_variant'] 16865 5781 EFTEAVEAK True H1975_Epitope_Rep3 1022.4920408254197 1022.4909499358599 27.262 2 0.16514327096442313 0.0007870916961826052 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1'] 97369 9479 SGAPHAILL True H1975_Epitope_Rep2 877.5021520166499 877.50104993586 41.429 2 0.16513801669460185 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000482694.1_1_2:85577073-85578124:-|nuORF'] 73247 7060 NEIDAEPPA True H1975_Epitope_Rep2 954.42944056886 954.4288949679301 32.084 1 0.16513076466213922 0.0007870916961826052 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 34919 17723 GQWASVIRV True PC9_epitope_Rep2 1014.5610638750999 1014.55996993586 73.453 2 0.1651277155801773 0.0007870916961826052 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 108465 9358 TEEPLEVSA True H1975_Epitope_Rep2 973.4604063439699 973.45985496793 40.958 1 0.16512707873519955 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1', 'ALMS1|p.T1762Qfs*17|1|0.45|ENSG00000116127|chr2:73451811-73451811|A/-|frameshift_variant', 'ALMS1|p.R2599Dfs*14|2|0.23|ENSG00000116127|chr2:73489754-73489754|A/-|frameshift_variant'] 103555 11268 SRDDTTLNAL True PC9_epitope_Rep5 1104.54111627616 1104.54000993586 48.335 2 0.16512516823528609 0.0007870916961826052 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 17854 10508 EIAQEFKTDLR True PC9_epitope_Rep6 1348.6986795467199 1348.6970249037902 51.202 3 0.16512503085125155 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 88269 17508 QYFPKAPEF True PC9_epitope_Rep2 1125.5494961318898 1125.54838993586 72.602 2 0.16511860977964166 0.0007870916961826052 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 137159 20450 YLDPSVLSGV True PC9_epitope_Rep4 1048.54407639828 1048.54357496793 86.807 1 0.16511486127580127 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 75700 16610 NQVEALNNL True PC9_epitope_Rep1 1013.5141732523299 1013.51306993586 68.717 2 0.16510734606899086 0.0007870916961826052 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'BIRC6|p.C777*|1|0.3|ENSG00000115760|chr2:32415620-32415621|TG/-|frameshift_variant'] 138084 7470 YQEGAKMAV True PC9_epitope_Rep5 995.4746169394698 995.47350993586 33.686 2 0.1650935083034302 0.0007870916961826052 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 53782 20688 KYFGGVLEYF True PC9_epitope_Rep4 1221.6070110080097 1221.6059099358602 87.737 2 0.16508394514150848 0.0007870916961826052 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 88370 6377 QYNPHVHQL True PC9_epitope_Rep3 1134.55704112382 1134.55540490379 29.554 3 0.16508021219653873 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 111609 10250 TLNNDIM[Oxidation]LIK True NCI_RA007_Epitope_Rep5 1189.6376598937302 1189.63656993586 46.058 2 0.16506807305004112 0.0007870916961826052 0.9438714419765777 ['ENST00000463701.1_1_7:142459574-142460868:+|nuORF', 'ENSG00000204983|ENST00000311737|PRSS1', 'CON__P07477'] 114224 8218 TRVSQINTL True PC9_epitope_Rep4 1030.5771078620598 1030.5760099358602 39.069 2 0.16506702155077266 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 17662 11012 EHSAVNMNL True PC9_epitope_Rep3 1013.4600295044901 1013.4589299358599 47.348 2 0.16506403336912442 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 67243 17362 LTDLVDDNYFY True H1975_Epitope_Rep1 1376.6136125100802 1376.61250993586 72.248 2 0.16506378269226987 0.0007870916961826052 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 74422 20960 NIVNSIVGV True PC9_epitope_Rep1 913.5232813840499 913.52218993586 85.446 2 0.16506169861713177 0.0007870916961826052 0.9438714419765777 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10', 'SLC38A10|p.V758Cfs*76|1|0.35|ENSG00000157637|chr17:81246644-81246644|C/-|frameshift_variant'] 115424 16022 TVFDEAIRA True PC9_epitope_Rep3 1020.5240096600398 1020.52290993586 66.778 2 0.1650596328230198 0.0007870916961826052 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 52622 19559 KQDLVELYL True PC9_epitope_Rep4 1119.6175756917098 1119.61646993586 83.356 2 0.16505857949032712 0.0007870916961826052 0.9438714419765777 ['ENSG00000160445|ENST00000291900|ZER1'] 107269 12154 SYQGKGFVM True PC9_epitope_Rep5 1015.4797023199098 1015.47860993586 51.74 2 0.1650580965728848 0.0007870916961826052 0.9438714419765777 ['ENSG00000130202|ENST00000252483|NECTIN2'] 98842 6091 SITTVQIQK True NCI_RA007_Epitope_Rep5 1016.5866099166 1016.58550993586 30.111 2 0.16504149947269214 0.0007870916961826052 0.9438714419765777 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 76107 6462 NRPGTVSSL True PC9_epitope_Rep1 929.49304388493 929.49194993586 29.66 2 0.16504029889670263 0.0007870916961826052 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 104847 8185 STELNHLGY True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 36.463 2 0.16503880886151112 0.0007870916961826052 0.9438714419765777 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 75478 14208 NQIKEFIYA True PC9_epitope_Rep6 1124.5866099165999 1124.58550993586 66.537 2 0.1650356613861735 0.0007870916961826052 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 136441 14730 YHGEVPVSL True PC9_epitope_Rep3 999.5025459394699 999.50144993586 61.796 2 0.16503238553297972 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 115109 10256 TTVTELQKV True PC9_epitope_Rep5 1017.5706254992899 1017.56952993586 44.436 2 0.16503041366863305 0.0007870916961826052 0.9438714419765777 ['ENSG00000102189|ENST00000322349|EEA1'] 96212 7180 SEELQSVQA True H1975_Epitope_Rep2 989.4665543535699 989.46544993586 32.552 2 0.16502889372304666 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF', 'ENST00000486527.6_1_2:25016788-25037388:+|nuORF', 'ENST00000498362.1_1_2:25016366-25039516:+|nuORF'] 70516 16863 LYTEKFEEF True PC9_epitope_Rep4 1204.5652057656796 1204.5641099358602 72.844 2 0.16502042671180464 0.0007870916961826052 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 42964 6961 IGAEVYHNLK True PC9_epitope_Rep4 1142.60840799034 1142.6067749037902 34.014 3 0.165020175815964 0.0007870916961826052 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 8478 8788 ATTSVITIVK True NCI_RA007_Epitope_Rep4 1031.6226610721499 1031.6215699358602 40.613 2 0.1650155873718309 0.0007870916961826052 0.9438714419765777 ['ENSG00000198517|ENST00000343242|MAFK'] 60515 4379 LIPAANTGESK True H1975_Epitope_Rep3 1099.58733819259 1099.58624993586 21.964 2 0.16501166978873172 0.0007870916961826052 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF'] 59118 8657 LGEISALTSK True H1975_Epitope_Rep3 1017.57062549929 1017.56952993586 38.295 2 0.16501027509938687 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 134102 12079 WQYRQLSAL True NCI_RA007_Epitope_Rep4 1163.60874234351 1163.60764993586 53.462 2 0.16500968626016785 0.0007870916961826052 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 109505 12407 THAAQQILL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 52.585 2 0.16500519371896585 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 72416 10257 MTEPIDEY True H1975_Epitope_Rep3 996.4110136233999 996.41046496793 44.502 1 0.16499928309239242 0.0007870916961826052 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 89422 4487 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 22.378 3 0.16499500388851318 0.0007870916961826052 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 71200 15585 M[Oxidation]FLSFPTTK True PC9_epitope_Rep6 1086.54196860374 1086.5408699358602 72.156 2 0.1649941073791437 0.0007870916961826052 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 104894 8863 STFNQVVLK True NCI_RA007_Epitope_Rep2 1034.5760452328998 1034.57494993586 39.124 2 0.16498820536059766 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 34910 15854 GQVVHLTLV True PC9_epitope_Rep4 964.57056592964 964.56946993586 68.911 2 0.16498250161491648 0.0007870916961826052 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'PATJ|p.P937Rfs*9|2|0.25|ENSG00000132849|chr1:61864607-61864607|C/-|frameshift_variant'] 105185 5289 STNSFALNK True NCI_RA007_Epitope_Rep3 980.4927095317599 980.49160993586 27.813 2 0.16497425430368537 0.0007870916961826052 0.9438714419765777 ['ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENST00000579209.1_1_17:62758032-62758825:-|nuORF'] 84632 13490 QHDPYITSI True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 56.909 2 0.16496947888740116 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 84416 13388 QGFQLTHSL True PC9_epitope_Rep6 1029.5243440132099 1029.5232499358601 63.167 2 0.16496612424224694 0.0007870916961826052 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 24108 5535 EYSKQMQRF True NCI_RA007_Epitope_Rep1 1215.57064258263 1215.56899490379 25.6 3 0.16496364653298018 0.0007870916961826052 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 90322 10552 RIEKQFLLY True H1975_Epitope_Rep2 1208.69174369148 1208.6906499358602 45.608 2 0.16496269798905513 0.0007870916961826052 0.9438714419765777 ['ENSG00000062716|ENST00000262291|VMP1', 'VMP1|p.Q104P|1|0.42|ENSG00000062716|chr17:59738844-59738844|A/C|missense_variant'] 70321 16047 LYPKTLFLL True NCI_RA007_Epitope_Rep3 1106.67396836902 1106.67286993586 70.806 2 0.1649572974425361 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138814|Q08209-5|PPP3CA', 'nc|ENSG00000138814|Q08209-3|PPP3CA', 'nc|ENSG00000138814|Q08209-2|PPP3CA', 'ENSG00000138814|ENST00000394854|PPP3CA'] 114026 9589 TRM[Oxidation]PDGPVAL True PC9_epitope_Rep2 1071.53828020563 1071.5371899358602 42.229 2 0.1649522854086867 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 61299 7347 LLDVRDRDSY True H1975_Epitope_Rep2 1250.62551460646 1250.62387490379 33.2 3 0.16494746094556983 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 100491 10934 SLPKGVVEV True PC9_epitope_Rep6 926.54368247546 926.54258993586 52.93 2 0.1649436365935935 0.0007870916961826052 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 29611 18904 FVLGHFILL True H1975_Epitope_Rep2 1057.63243791021 1057.63134993586 78.476 2 0.16493997398578092 0.0007870916961826052 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 73957 18918 NHMAVAFVL True PC9_epitope_Rep4 1000.5164221818 1000.51532993586 80.855 2 0.16493610840243447 0.0007870916961826052 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 17472 16747 EHGNFLITV True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 76.909 2 0.16493584535621275 0.0007870916961826052 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 53708 9393 KYDPNVYSI True NCI_RA007_Epitope_Rep4 1097.53932537101 1097.53822993586 42.984 2 0.164935459635815 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 69208 11278 LVNELTEFAK True H1975_Epitope_Rep1 1162.6233893481399 1162.6228749679299 48.358 1 0.16493166301657747 0.0007870916961826052 0.9438714419765777 ['CON__P02769'] 16006 9099 EEAENTLQSFR True NCI_RA007_Epitope_Rep1 1322.61025846514 1322.6086049037901 39.394 3 0.16492440718376655 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 4085 19597 AHSNEILIF True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 80.432 2 0.16491191233565444 0.0007870916961826052 0.9438714419765777 ['ENST00000554115.5_1_14:50249154-50249313:+|nuORF', 'ENSG00000165516|ENST00000298307|KLHDC2'] 106170 11823 SVPEFPLSPPK True NCI_RA007_Epitope_Rep4 1196.6441247927198 1196.64302993586 52.456 2 0.16491166936272889 0.0007870916961826052 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 24011 19839 EYPELRGVF True PC9_epitope_Rep3 1108.5553097883198 1108.5542099358602 81.545 2 0.16491116592160787 0.0007870916961826052 0.9438714419765777 ['ENST00000409011.5_2_2:39005336-39005417:+|nuORF'] 132314 12238 VYLPNINKI True NCI_RA007_Epitope_Rep4 1072.62808080576 1072.6269899358601 54.07 2 0.16490999626553934 0.0007870916961826052 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 2874 4868 AEYNGRLAA True NCI_RA007_Epitope_Rep3 963.4773938207899 963.47628993586 26.133 2 0.16490929333887033 0.0007870916961826052 0.9438714419765777 ['ENSG00000101413|ENST00000373433|RPRD1B'] 75794 10205 NRAQIQTVI True PC9_epitope_Rep2 1041.59309227937 1041.59198993586 44.59 2 0.16490548922853696 0.0007870916961826052 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 108212 6132 TEADVNPKAYP True H1975_Epitope_Rep2 1203.5771674317098 1203.57606993586 28.564 2 0.16490281921424835 0.0007870916961826052 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 76280 10014 NSDPNLHLL True NCI_RA007_Epitope_Rep3 1021.5192586327701 1021.51816993586 46.482 2 0.1649003936402425 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 108234 8119 TEAGFPEQA True H1975_Epitope_Rep3 948.4188758851598 948.4183249679301 36.207 1 0.16489991388129835 0.0007870916961826052 0.9438714419765777 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 116467 11632 TYAPAIHQI True PC9_epitope_Rep2 1012.5341804209202 1012.53308993586 50.07 2 0.16489752504135455 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant'] 94845 9304 RYMPQNPHI True PC9_epitope_Rep1 1154.5654976325397 1154.5638449037901 40.642 3 0.16489186578296988 0.0007870916961826052 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 47337 20463 IYGYVAEQF True PC9_epitope_Rep5 1088.5178616504397 1088.51676993586 83.747 2 0.16487820665840736 0.0007870916961826052 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 24042 14474 EYQDLLNVK True PC9_epitope_Rep4 1120.5764391557198 1120.57534993586 63.585 2 0.16487502681088578 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 107946 21346 TAYDNFVEL True PC9_epitope_Rep1 1070.49204082542 1070.49094993586 86.938 2 0.16486814942346603 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 97060 6221 SEYIHAQVA True NCI_RA007_Epitope_Rep5 1016.4927095317598 1016.49160993586 30.606 2 0.16486448011334606 0.0007870916961826052 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 85017 18294 QIFNGTFVKL True PC9_epitope_Rep6 1165.64954452633 1165.64844993586 83.01 2 0.16486322071655027 0.0007870916961826052 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 94666 7647 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.6154299358602 37.204 2 0.16485292829515621 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 52319 10663 KPANVFITA True PC9_epitope_Rep4 959.54401682863 959.54290993586 48.763 2 0.16485260199743404 0.0007870916961826052 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 25372 8747 FEIEPDKEC True H1975_Epitope_Rep1 1108.47467650912 1108.47356993586 38.576 2 0.16485256842853627 0.0007870916961826052 0.9438714419765777 ['ENSG00000100941|ENST00000216832|PNN'] 40925 8345 HVVFIAQR True PC9_epitope_Rep5 968.55558457184 968.55448993586 37.039 2 0.16485151365657258 0.0007870916961826052 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 35404 12985 GTDELRLLY True H1975_Epitope_Rep3 1078.56587447202 1078.56476993586 55.181 2 0.16485107694514328 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 48161 12737 KASDLYITL True NCI_RA007_Epitope_Rep2 1022.56481184286 1022.56370993586 54.162 2 0.1648506910598845 0.0007870916961826052 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2'] 124329 13505 VLDPYLLKY True H1975_Epitope_Rep3 1122.63249747986 1122.6319749679299 57.224 1 0.1648460089380618 0.0007870916961826052 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 40181 11956 HRFPTVAV True PC9_epitope_Rep3 925.5133854066898 925.5122899358599 51.011 2 0.16483954544758456 0.0007870916961826052 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 90454 14842 RISLPLPNF True NCI_RA007_Epitope_Rep3 1055.61276509479 1055.6116699358602 65.81 2 0.16483283385054484 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 76538 4508 NTDPHSQEYV True H1975_Epitope_Rep2 1188.5047307674402 1188.50362993586 22.452 2 0.1648284846377108 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 23666 20632 EYGPVYSTW True PC9_epitope_Rep3 1100.48147614172 1100.4803699358602 84.632 2 0.16482286845625546 0.0007870916961826052 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30'] 109985 14502 THSNTIVVSL True PC9_epitope_Rep5 1069.57677350889 1069.57566993586 60.782 2 0.16481472324433996 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 28102 15571 FREDSTLAL True PC9_epitope_Rep3 1050.53457434374 1050.53346993586 65.043 2 0.16481378063690866 0.0007870916961826052 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671'] 138925 11316 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep2 1177.4849072200898 1177.48380993586 48.574 2 0.16481263549611888 0.0007870916961826052 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 89330 8614 RELVKNWVP True NCI_RA007_Epitope_Rep5 1139.64512785223 1139.64402993586 39.809 2 0.16481133368481782 0.0007870916961826052 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 7323 7163 ARSNVNVDL True PC9_epitope_Rep6 986.5145076055 986.51340993586 36.632 2 0.16479775184282952 0.0007870916961826052 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 38712 9965 HHSNLIAGM True PC9_epitope_Rep1 978.47053461854 978.46942993586 43.194 2 0.1647956061338048 0.0007870916961826052 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 102755 4934 SQEGRPVQV True PC9_epitope_Rep3 998.5145076054997 998.51340993586 24.072 2 0.1647939987748585 0.0007870916961826052 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 41014 17436 HYGLPVVV True PC9_epitope_Rep2 882.49633836022 882.49578496793 72.32 1 0.16479367781725812 0.0007870916961826052 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 139451 6486 YTETEPYHNY True H1975_Epitope_Rep2 1315.5356965425499 1315.5351749679298 29.865 1 0.16479179994617896 0.0007870916961826052 0.9438714419765777 ['ENSG00000158545|ENST00000301011|ZC3H18', 'ENST00000568072.1_1_16:88666261-88675531:+|nuORF'] 108935 4791 TETLVTREA True H1975_Epitope_Rep2 1018.5294889633 1018.52838993586 23.518 2 0.16479167790337282 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000211460|Q15631-2|TSN', 'ENST00000490104.5_1_2:122514991-122522940:+|nuORF', 'ENST00000467324.5_1_2:122513466-122522940:+|nuORF', 'ENSG00000211460|ENST00000389682|TSN'] 45102 16730 IQSDKFLNL True PC9_epitope_Rep4 1076.5866099166 1076.58550993586 72.32 2 0.1647842477014207 0.0007870916961826052 0.9438714419765777 ['ENSG00000136052|ENST00000258538|SLC41A2'] 57927 9269 LEQLRPVTV True H1975_Epitope_Rep3 1053.61824439805 1053.6171499358602 40.646 2 0.16478095372988097 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENST00000469714.1_1_X:17092694-17165601:+|nuORF', 'ENST00000470686.1_1_X:17156958-17165601:+|nuORF'] 53203 11501 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep2 1213.59004099497 1213.58894993586 49.296 2 0.16477946795119983 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 26525 21372 FIVDPVSNL True PC9_epitope_Rep2 1002.53859709502 1002.53750993586 87.676 2 0.1647756098802709 0.0007870916961826052 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 33774 11024 GLSQSALPYR True PC9_epitope_Rep2 1090.5771078620598 1090.5760099358602 47.723 2 0.16477391168055744 0.0007870916961826052 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 23885 11347 EYMKHTRLF True PC9_epitope_Rep1 1223.6121134717898 1223.61046490379 48.524 3 0.16477388042611488 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 106178 9005 SVPEGPWWRK True NCI_RA007_Epitope_Rep4 1240.63529144452 1240.6336349037902 41.47 3 0.1647582359580988 0.0007870916961826052 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 67441 5709 LTEAPLNPK True NCI_RA007_Epitope_Rep4 981.5494961318899 981.54838993586 28.574 2 0.16475437417718866 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 137140 9045 YLDKGILKY True H1975_Epitope_Rep3 1111.62774645259 1111.62664993586 39.779 2 0.16474229728795264 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000070882|Q9H4L5-8|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-7|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-6|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-5|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-4|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-3|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-2|OSBPL3', 'ENSG00000070882|ENST00000313367|OSBPL3'] 123260 7226 VHPPPTTTY True PC9_epitope_Rep5 1011.5025459394701 1011.50144993586 32.759 2 0.16474039281974043 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 139096 10255 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 44.452 2 0.16473698164879247 0.0007870916961826052 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 34366 4424 GPSSVEDIK True NCI_RA007_Epitope_Rep5 930.4658260775799 930.46472993586 23.65 2 0.16473451299244596 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 13123 10847 DLSLEEIQK True NCI_RA007_Epitope_Rep1 1073.5604547384098 1073.5593499358602 46.187 2 0.16472953269942484 0.0007870916961826052 0.9438714419765777 ['ENSG00000104435|ENST00000220876|STMN2', 'nc|ENSG00000104435|Q93045-2|STMN2', 'ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 83188 14854 PYVNNVPHL True PC9_epitope_Rep5 1051.54507945779 1051.54398993586 62.137 2 0.16472860170524528 0.0007870916961826052 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 40519 13411 HSIPVTVEV True PC9_epitope_Rep2 979.53384606775 979.53274993586 56.865 2 0.16472821627250825 0.0007870916961826052 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5', 'HDAC5|p.L646Sfs*24|1|0.2|ENSG00000108840|chr17:44086686-44086686|G/-|frameshift_variant'] 38641 18491 HHLVIPSVL True PC9_epitope_Rep1 1013.6022004110899 1013.60110993586 75.916 2 0.16472005926443833 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 112199 15711 TLVYHVVGV True PC9_epitope_Rep2 985.5596668927699 985.55856993586 65.706 2 0.16471857134679216 0.0007870916961826052 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 132046 21364 VYIDQTMVL True PC9_epitope_Rep1 1080.5525329069999 1080.5514299358601 87.008 2 0.16471673513598276 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 196 9274 AAFDGGFTVK True NCI_RA007_Epitope_Rep3 1011.5025459394699 1011.50144993586 43.589 2 0.1647163715060969 0.0007870916961826052 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 17798 16843 EHVPVVIGL True PC9_epitope_Rep6 961.5596668927699 961.55856993586 77.3 2 0.16471495053063862 0.0007870916961826052 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6', 'SOCS6|p.E434Gfs*2|1|0.26|ENSG00000170677|chr18:70325969-70325979|AGCACTCAAAT/-|frameshift_variant'] 31691 10060 GEIGEEKILP True H1975_Epitope_Rep2 1083.58119018299 1083.58008993586 43.688 2 0.1647025924194676 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 136654 8035 YIDQEELNK True PC9_epitope_Rep1 1150.5506183307 1150.5495299358602 35.728 2 0.16470131809427663 0.0007870916961826052 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 33073 4519 GKFKQAETL True NCI_RA007_Epitope_Rep4 1020.5603951687598 1020.55928993586 23.777 2 0.16470097306509995 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 135129 8110 YAQARFDAY True H1975_Epitope_Rep2 1103.50360856863 1103.5025099358602 36.145 2 0.16469940394608315 0.0007870916961826052 0.9438714419765777 ['ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000525155.5_1_11:67821457-67828962:-|nuORF'] 45131 10509 IQVTKVTQV True PC9_epitope_Rep3 1014.6073453611799 1014.60624993586 45.361 2 0.16469769326622533 0.0007870916961826052 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 103398 15137 SQWSLQHEI True PC9_epitope_Rep2 1126.54072235334 1126.5396299358601 63.484 2 0.16469750534933694 0.0007870916961826052 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L'] 76093 13673 NRNAEEFEL True PC9_epitope_Rep5 1120.51490152832 1120.51380993586 57.618 2 0.16469687775440842 0.0007870916961826052 0.9438714419765777 ['ENSG00000138382|ENST00000260953|METTL5'] 132493 10582 VYPEKLATKF True PC9_epitope_Rep4 1194.6648602372995 1194.66322490379 48.444 3 0.1646968351548445 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 32006 6705 GETLLQRAA True NCI_RA007_Epitope_Rep3 957.5243440132099 957.52324993586 33.459 2 0.16469233229801133 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1'] 129809 19128 VTLDNGIIRV True PC9_epitope_Rep5 1098.6397081186199 1098.6386099358601 78.61 2 0.1646902402271159 0.0007870916961826052 0.9438714419765777 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75651254-75651557:-|nuORF', 'ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 104125 17517 SRYPDQWIV True PC9_epitope_Rep4 1162.57710786206 1162.5760099358602 75.383 2 0.16468956886511274 0.0007870916961826052 0.9438714419765777 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 67506 16226 LTELPDWSY True H1975_Epitope_Rep2 1122.5233409537 1122.5222499358601 67.623 2 0.16468784103214176 0.0007870916961826052 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 131250 10560 VVQDGITLITK True NCI_RA007_Epitope_Rep1 1185.69688864157 1185.6957899358601 45.061 2 0.16468351338083265 0.0007870916961826052 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 125618 12669 VMDSKIVQV True PC9_epitope_Rep5 1017.5528672601698 1017.55176993586 53.735 2 0.1646766175652903 0.0007870916961826052 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 35159 6539 GSDCTTIHY True H1975_Epitope_Rep3 995.4018459220301 995.40074993586 30.12 2 0.16467597431832684 0.0007870916961826052 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.Y236C|3|0.43|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 65316 10366 LSELEAALQR True NCI_RA007_Epitope_Rep5 1128.6138872935999 1128.61278993586 46.502 2 0.16466658659038214 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 11634 11448 DHASIQMNV True PC9_epitope_Rep2 1013.46002950449 1013.4589299358599 49.354 2 0.16466509993475778 0.0007870916961826052 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 25280 7322 FEDVAFDEKK True NCI_RA007_Epitope_Rep1 1226.5819184589798 1226.58028490379 32.473 3 0.16466272995361889 0.0007870916961826052 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 114283 7858 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 38.029 2 0.16465771002000715 0.0007870916961826052 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 48201 18911 KAYTSQFISL True PC9_epitope_Rep3 1156.6128246644398 1156.61172993586 77.962 2 0.16465657202737943 0.0007870916961826052 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 132912 16847 VYTTTVHWL True PC9_epitope_Rep6 1118.5760452329 1118.57494993586 77.316 2 0.16465099090589766 0.0007870916961826052 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 21228 22562 ERFSLIFTL True PC9_epitope_Rep1 1124.62299542532 1124.62188993586 91.59 2 0.16465060592371816 0.0007870916961826052 0.9438714419765777 ['ENST00000528098.5_1_11:57182763-57193651:-|nuORF', 'ENSG00000134802|ENST00000395124|SLC43A3', 'nc|ENSG00000134802|Q8NBI5-2|SLC43A3'] 40245 13605 HRIQDLEQL True PC9_epitope_Rep1 1150.6094706195 1150.60836993586 57.188 2 0.16464272814637815 0.0007870916961826052 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 14047 8501 DSDFRKDDFY True H1975_Epitope_Rep1 1306.5465955794198 1306.54495490379 37.629 3 0.1646396922115225 0.0007870916961826052 0.9438714419765777 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 82126 13167 PTDEITVYY True H1975_Epitope_Rep2 1099.50735653639 1099.50624993586 55.771 2 0.16463326967802158 0.0007870916961826052 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000474340.1_1_9:95003027-95004705:-|nuORF'] 132100 20873 VYILQPEVI True PC9_epitope_Rep4 1072.6168474157198 1072.61627496793 88.444 1 0.1646324069644943 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 9855 20496 AYLPVNESF True PC9_epitope_Rep1 1038.5022115863 1038.50110993586 83.65 2 0.16463125557115973 0.0007870916961826052 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 44849 19796 IPYHIVNIV True PC9_epitope_Rep3 1066.6175161220601 1066.61640993586 81.378 2 0.16463068371560372 0.0007870916961826052 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 9264 3897 AVQRTLLEK True NCI_RA007_Epitope_Rep5 1056.6291434349198 1056.6280499358602 21.279 2 0.16462771713371255 0.0007870916961826052 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 91160 16299 RLPETLPSL True PC9_epitope_Rep6 1024.59169529704 1024.5905899358602 75.057 2 0.16462557217666338 0.0007870916961826052 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 4949 13522 ALIARVTNV True PC9_epitope_Rep5 955.58146496651 955.58036993586 57.034 2 0.1646245058870087 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD', 'nc|ENSG00000103490|Q9ULZ3-3|PYCARD', 'ENST00000565022.1_1_16:31212908-31213633:-|nuORF'] 11712 10766 DHFNAM[Oxidation]TSL True PC9_epitope_Rep2 1050.44404546762 1050.44294993586 46.729 2 0.16462346345383727 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 4942 20700 ALHSWFQTL True PC9_epitope_Rep5 1101.5607295219302 1101.5596299358601 84.68 2 0.164618618911469 0.0007870916961826052 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 36153 12316 GVFEYFNAK True NCI_RA007_Epitope_Rep5 1073.5181960036098 1073.5170899358602 54.024 2 0.16461626755328732 0.0007870916961826052 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 24737 17879 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.4960299358602 73.564 2 0.16461494472488025 0.0007870916961826052 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 136493 15970 YHISLEHEIL True PC9_epitope_Rep4 1252.64518742188 1252.6435349037902 69.358 3 0.1646065567139875 0.0007870916961826052 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant'] 8845 8536 AVFPSIVGRPR True NCI_RA007_Epitope_Rep3 1197.69822605425 1197.6965849037902 40.65 3 0.16459575869719859 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 65122 8042 LSDPQVHTV True PC9_epitope_Rep1 994.5083595959 994.50726993586 35.755 2 0.164585433689225 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 54402 20806 KYSDITIMF True PC9_epitope_Rep1 1116.5525329069999 1116.5514299358601 84.856 2 0.1645795324870733 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000130005|Q14353-2|GAMT', 'ENSG00000130005|ENST00000252288|GAMT'] 18365 20816 EIYKEFFEV True PC9_epitope_Rep5 1202.58594121026 1202.5848499358601 85.118 2 0.16457919697921242 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 131857 19951 VYDGKFAIF True PC9_epitope_Rep2 1058.54368247546 1058.5425899358602 82.141 2 0.16457749714074843 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'ENST00000546884.1_1_12:56474084-56480451:+|nuORF', 'nc|ENSG00000065361|P21860-3|ERBB3', 'nc|ENSG00000065361|P21860-2|ERBB3'] 25975 15509 FGYPDPTYL True H1975_Epitope_Rep1 1071.49131254943 1071.4907749679298 64.928 1 0.16457543373700043 0.0007870916961826052 0.9438714419765777 ['ENSG00000178498|ENST00000337737|DTX3', 'nc|ENSG00000178498|Q8N9I9-2|DTX3'] 88865 4731 REAEFTKSIA True NCI_RA007_Epitope_Rep5 1150.59823722946 1150.5971499358602 24.882 2 0.1645747229731183 0.0007870916961826052 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 14035 15164 DSDAPLFY True H1975_Epitope_Rep3 926.4021631918599 926.4016149679301 63.73 1 0.16457330433160464 0.0007870916961826052 0.9438714419765777 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 139491 15586 YTGTPDWLY True H1975_Epitope_Rep3 1114.4971262058598 1114.49657496793 65.368 1 0.16457301431827032 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 5077 20828 ALLPHLYTL True PC9_epitope_Rep5 1039.60661708519 1039.6055299358602 85.164 2 0.1645716082526492 0.0007870916961826052 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 47891 16092 IYVHDLLTF True NCI_RA007_Epitope_Rep1 1119.59644632431 1119.5953499358602 66.699 2 0.16457038817225134 0.0007870916961826052 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 74606 13340 NLDQPDLYY True H1975_Epitope_Rep2 1139.51350454599 1139.5124099358602 56.444 2 0.16456827920400258 0.0007870916961826052 0.9438714419765777 ['ENSG00000171853|ENST00000324266|TRAPPC12'] 31748 5160 GELEAVKQA True NCI_RA007_Epitope_Rep4 943.49746055903 943.49636993586 26.373 2 0.16456566230162137 0.0007870916961826052 0.9438714419765777 ['SPAG9|p.M1269Ifs*14|1|0.25|ENSG00000008294|chr17:50970743-50970750|TGACAAGC/-|frameshift_variant', 'ENST00000514613.5_1_17:49067015-49156972:-|nuORF', 'nc|ENSG00000008294|O60271-5|SPAG9', 'nc|ENSG00000008294|O60271-3|SPAG9', 'nc|ENSG00000008294|O60271-9|SPAG9', 'nc|ENSG00000008294|O60271-4|SPAG9', 'nc|ENSG00000008294|O60271-2|SPAG9', 'ENSG00000008294|ENST00000262013|SPAG9'] 138929 13827 YSEEIVEMY True H1975_Epitope_Rep1 1161.4899922200898 1161.48947496793 58.332 1 0.16455680177677223 0.0007870916961826052 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 2048 12485 AELENLVNQAA True H1975_Epitope_Rep3 1170.58806646858 1170.58747496793 53.218 1 0.16455670546348214 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 68091 7439 LTPDETYVPK True H1975_Epitope_Rep1 1161.5917548666898 1161.59064993586 33.617 2 0.1645502475259334 0.0007870916961826052 0.9438714419765777 ['CON__P02769'] 9440 6179 AVVTQVNKV True PC9_epitope_Rep2 956.5654805492 956.56438993586 29.157 2 0.1645477962293916 0.0007870916961826052 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 102970 7410 SQIQEFKEA True PC9_epitope_Rep4 1078.5294889632999 1078.52838993586 35.85 2 0.16454597237512375 0.0007870916961826052 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 88431 22461 QYSPLLAAF True PC9_epitope_Rep5 1008.5280324113198 1008.5274749679301 91.399 1 0.16453607052485972 0.0007870916961826052 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 124622 5162 VLIAAHGNSLR True NCI_RA007_Epitope_Rep5 1149.66184054553 1149.66019490379 26.55 3 0.1645339099228635 0.0007870916961826052 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 1247 4853 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 23.754 2 0.164531760127988 0.0007870916961826052 0.9438714419765777 ['ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7', 'nc|ENSG00000243414|Q86XR7-2|TICAM2'] 98064 16309 SHVDLVVM[Oxidation]V True PC9_epitope_Rep5 1013.52156751233 1013.52046993586 67.728 2 0.16453066546894463 0.0007870916961826052 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 126769 6660 VPSLQGEKA True PC9_epitope_Rep3 927.5025459394699 927.50144993586 30.642 2 0.16452752726730174 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 126714 8916 VPRQPTVTSV True PC9_epitope_Rep1 1082.60840799034 1082.60730993586 39.137 2 0.16452523128060934 0.0007870916961826052 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5'] 123075 17156 VHAELADVL True PC9_epitope_Rep5 965.5181960036099 965.51708993586 71.012 2 0.16452101730511406 0.0007870916961826052 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 98076 4748 SHVSGTTTL True PC9_epitope_Rep3 901.45051036661 901.44940993586 23.352 2 0.16451762699139838 0.0007870916961826052 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 334 20844 AAIPIQINV True PC9_epitope_Rep2 937.55966689277 937.55856993586 85.622 2 0.16451558830581883 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 136469 6605 YHGNTNPEL True PC9_epitope_Rep5 1043.46722305991 1043.4661299358602 30.378 2 0.16450196340475032 0.0007870916961826052 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 137139 9181 YLDKGILKY True H1975_Epitope_Rep2 1111.62774645259 1111.62664993586 40.269 2 0.16450191763776495 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000070882|Q9H4L5-8|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-7|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-6|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-5|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-4|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-3|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-2|OSBPL3', 'ENSG00000070882|ENST00000313367|OSBPL3'] 103663 14119 SRDPIVMGV True PC9_epitope_Rep5 972.50625142092 972.50514993586 59.319 2 0.16449903085445647 0.0007870916961826052 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 76070 15167 NRLTFASTL True PC9_epitope_Rep2 1021.55564414149 1021.55454993586 63.597 2 0.16449767254047978 0.0007870916961826052 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 77564 17389 NYSNIRFQF True PC9_epitope_Rep6 1187.57235683479 1187.5712499358601 79.501 2 0.1644874906080321 0.0007870916961826052 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 103547 11301 SRDDTTLNAL True PC9_epitope_Rep1 1104.54111627616 1104.54000993586 48.348 2 0.1644854230402958 0.0007870916961826052 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 47401 12663 IYIKHPHLF True PC9_epitope_Rep2 1166.66004964038 1166.6589499358602 54.015 2 0.1644758337154195 0.0007870916961826052 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 53190 7642 KSYLMNRL True NCI_RA007_Epitope_Rep4 1023.5535359665099 1023.55242993586 36.049 2 0.16447151166738394 0.0007870916961826052 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4'] 9991 10868 AYSSYVHQY True PC9_epitope_Rep3 1116.48762415132 1116.48652993586 46.781 2 0.1644691547724792 0.0007870916961826052 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000592995.1_1_17:58538022-58538124:-|nuORF'] 52508 10558 KPNPNQIISV True PC9_epitope_Rep6 1108.62405805448 1108.62296993586 51.413 2 0.1644654957743883 0.0007870916961826052 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 134882 14660 YADGESFLGY True H1975_Epitope_Rep1 1120.4713053808398 1120.4707749679299 61.604 1 0.1644652016655524 0.0007870916961826052 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 56147 9755 LDNDIM[Oxidation]LIK True H1975_Epitope_Rep1 1089.57399700801 1089.57288993586 42.452 2 0.16446441048944171 0.0007870916961826052 0.9438714419765777 ['CON__P00761', 'nc|ENSG00000010438|P35030-5|PRSS3', 'ENSG00000010438|ENST00000379405|PRSS3', 'nc|ENSG00000010438|P35030-2|PRSS3', 'nc|ENSG00000010438|P35030-4|PRSS3', 'nc|ENSG00000010438|P35030|PRSS3'] 47704 15192 IYPVKYTQTF True PC9_epitope_Rep4 1258.65977485686 1258.6586699358602 66.359 2 0.16446384860373922 0.0007870916961826052 0.9438714419765777 ['ENSG00000112378|ENST00000421351|PERP'] 86354 20759 QQLEGAFAL True PC9_epitope_Rep1 975.5025459394698 975.50144993586 84.678 2 0.16446156599839992 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'ENSG00000131459|ENST00000253778|GFPT2'] 34502 8208 GQDVGRYQV True PC9_epitope_Rep3 1020.49885754136 1020.49776993586 36.551 2 0.16445391535034412 0.0007870916961826052 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 9558 21396 AYANIISQF True PC9_epitope_Rep1 1025.5181960036098 1025.5170899358602 87.133 2 0.16444708451968523 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 38742 5413 HHTTQQTFL True PC9_epitope_Rep4 1111.54105670651 1111.53994993586 27.552 2 0.16444300153165078 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 60149 20084 LHYGLPVVV True PC9_epitope_Rep1 995.5804023373499 995.57930993586 82.081 2 0.16444156025230972 0.0007870916961826052 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 1303 7450 AEDVLSGKVSA True H1975_Epitope_Rep3 1074.55570371114 1074.55460993586 33.635 2 0.1644407612215361 0.0007870916961826052 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 71296 15032 MHAGSLLL True PC9_epitope_Rep2 840.45275929608 840.45166993586 63.077 2 0.164426420826771 0.0007870916961826052 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'ENSG00000196862|ENST00000408999|RGPD4', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 138063 5296 YQDTHPERL True PC9_epitope_Rep1 1157.5465360097699 1157.54488490379 25.213 3 0.1644168098956479 0.0007870916961826052 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 95374 7062 SAIDTREEL True NCI_RA007_Epitope_Rep5 1032.50875351872 1032.5076499358602 33.844 2 0.16440683426646582 0.0007870916961826052 0.9438714419765777 ['ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-3|CEP170'] 44965 18781 IQHDLIFSL True PC9_epitope_Rep6 1084.5916952970401 1084.5905899358602 84.881 2 0.16439735501647462 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 94747 18904 RYLNEFEEL True PC9_epitope_Rep2 1211.5822528121498 1211.5811499358601 78.077 2 0.16439699847929093 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 13906 11200 DRDPTAYAL True PC9_epitope_Rep6 1020.4876241513199 1020.48652993586 54.057 2 0.164390676091475 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 132967 22198 VYVDDIYVI True PC9_epitope_Rep3 1097.56447748969 1097.5633899358602 90.67 2 0.16438976279837914 0.0007870916961826052 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 1083 4892 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.39082993586 23.901 2 0.16438888219957173 0.0007870916961826052 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 108493 4730 TEEYPNKPP True H1975_Epitope_Rep3 1073.5029398622898 1073.50184993586 23.319 2 0.16438880594638133 0.0007870916961826052 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A'] 132155 10361 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 44.797 3 0.1643772507512195 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 1438 10929 AEEIAGKWLQA True H1975_Epitope_Rep1 1214.62953735774 1214.62844993586 47.001 2 0.16437526242786188 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 96769 8625 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 38.133 1 0.16437444815700097 0.0007870916961826052 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 130944 10069 VVINYSIVK True NCI_RA007_Epitope_Rep4 1033.6171817688898 1033.6160899358601 45.575 2 0.164356376808672 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 40579 13158 HTDDPLTWDY True H1975_Epitope_Rep1 1261.52513185885 1261.52457496793 55.706 1 0.16435071645381139 0.0007870916961826052 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 44029 14560 ILLAELEQLK True H1975_Epitope_Rep3 1168.7067250492798 1168.70562993586 61.372 2 0.1643493099791857 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 29415 24225 FVFPGELLL True PC9_epitope_Rep1 1033.5848190114498 1033.5837299358602 97.998 2 0.16434741171537243 0.0007870916961826052 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 139774 10395 YVDAGTPMY True H1975_Epitope_Rep2 1015.4320834211499 1015.43157496793 44.996 1 0.1643433212963988 0.0007870916961826052 0.9438714419765777 ['ENSG00000155189|ENST00000285518|AGPAT5', 'AGPAT5|p.T229Rfs*19|1|0.39|ENSG00000155189|chr8:6747769-6747769|C/-|frameshift_variant'] 14654 13575 DVNAAIATIK True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 57.072 2 0.1643355656979219 0.0007870916961826052 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 138019 21366 YQDEVFGGF True PC9_epitope_Rep3 1060.4501760134397 1060.44906993586 87.483 2 0.1643348951690531 0.0007870916961826052 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 67231 12007 LTDLVDDNY True H1975_Epitope_Rep2 1066.48187006454 1066.48076993586 51.265 2 0.164333859198881 0.0007870916961826052 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 77568 21154 NYSPYVNYF True PC9_epitope_Rep1 1165.50802524273 1165.50747496793 86.201 1 0.16432873593975716 0.0007870916961826052 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 123361 17276 VIAEILRGV True PC9_epitope_Rep6 968.6018660579199 968.60076993586 79.054 2 0.1643225710028102 0.0007870916961826052 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 32314 10008 GFVTFDDHD True NCI_RA007_Epitope_Rep3 1051.42468954159 1051.42358993586 46.459 2 0.1643221135346951 0.0007870916961826052 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 71119 18560 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 77.016 2 0.16432199914769094 0.0007870916961826052 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 132778 21036 VYSQFITQL True PC9_epitope_Rep2 1097.5757108797297 1097.57460993586 86.368 2 0.16432016149935136 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 47333 20454 IYGYVAEQF True PC9_epitope_Rep3 1088.5178616504397 1088.51676993586 83.932 2 0.1643179202626886 0.0007870916961826052 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 21055 5929 ERDM[Oxidation]SNVSL True PC9_epitope_Rep2 1065.47607387189 1065.4749699358601 28.196 2 0.16431669210957228 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 87373 6290 QTDKLKELY True H1975_Epitope_Rep2 1136.6077392839998 1136.6060849037901 29.136 3 0.1643165447853975 0.0007870916961826052 0.9438714419765777 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 139365 9328 YTDTYTEAY True H1975_Epitope_Rep3 1125.4502355830898 1125.4491299358601 40.877 2 0.16431489058936877 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 61261 15131 LLDSDEPLVY True H1975_Epitope_Rep2 1162.57577044938 1162.57517496793 63.358 1 0.16431456367546818 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 109915 19100 THQPVFIQL True PC9_epitope_Rep5 1081.59202965021 1081.59092993586 78.498 2 0.16430002278246109 0.0007870916961826052 0.9438714419765777 ['ENSG00000123104|ENST00000381340|ITPR2'] 131291 20904 VVQPLLVSV True PC9_epitope_Rep2 952.5957180483199 952.59462993586 85.853 2 0.16429920141362864 0.0007870916961826052 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 87338 5424 QTATQLLK True NCI_RA007_Epitope_Rep5 901.5232813840499 901.52218993586 27.552 2 0.164298479483772 0.0007870916961826052 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF', 'RPL7A|p.R89H|1|0.07|ENSG00000148303|chr9:133349692-133349692|G/A|missense_variant', 'ENST00000437848.1_1_1:46117146-46117242:-|nuORF', 'ENST00000485706.5_1_9:136216467-136216912:+|nuORF', 'ENST00000424559.2_1_22:19780074-19780431:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 139171 9841 YSSPYPQEY True H1975_Epitope_Rep2 1132.4713053808398 1132.47020993586 42.84 2 0.16429193154516208 0.0007870916961826052 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76737066-76741701:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 64527 17077 LRDDTSFVF True PC9_epitope_Rep6 1098.53457434374 1098.53346993586 78.255 2 0.16427979935789586 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 120169 18434 VFLENVIR True PC9_epitope_Rep5 988.5705659296399 988.56946993586 75.927 2 0.16427394482387986 0.0007870916961826052 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 95244 8153 SADETWDSA True NCI_RA007_Epitope_Rep5 980.37231961556 980.37122993586 38.043 2 0.1642652014907599 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 105448 11492 SVAQLLLSK True NCI_RA007_Epitope_Rep4 957.58588164061 957.58478993586 51.135 2 0.16426515081582316 0.0007870916961826052 0.9438714419765777 ['ENSG00000073614|ENST00000399788|KDM5A', 'nc|ENSG00000073614|P29375-2|KDM5A', 'ENST00000541335.1_1_12:431581-432275:-|nuORF'] 17394 13196 EHFNGVAEL True PC9_epitope_Rep2 1014.4770594676198 1014.47596993586 56.036 2 0.1642647487268221 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5A|p.E251Q|1|0.1|ENSG00000066027|chr1:212347393-212347393|G/C|missense_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E'] 118716 16417 VEDAFVPVIKF True H1975_Epitope_Rep2 1262.6910749851397 1262.68996993586 68.368 2 0.16426384609967734 0.0007870916961826052 0.9438714419765777 ['ENSG00000115421|ENST00000238714|PAPOLG', 'nc|ENSG00000115421|Q9BWT3-2|PAPOLG'] 104718 11978 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.5433099358602 51.08 2 0.16426001443407903 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 140563 19293 YYLNEIQSF True PC9_epitope_Rep6 1175.5498900547097 1175.5487899358602 86.857 2 0.1642565760458712 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 8235 14283 ATIIDILTK True NCI_RA007_Epitope_Rep3 986.60119735158 986.60010993586 63.507 2 0.16425145236175204 0.0007870916961826052 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 123413 9445 VIDQQNGLY True H1975_Epitope_Rep3 1048.5189242795998 1048.51837496793 41.332 1 0.16424500015142476 0.0007870916961826052 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 134898 13354 YADPGVSFY True H1975_Epitope_Rep2 1017.44436235701 1017.44326993586 56.498 2 0.16423151254905943 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 3259 5071 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 27.159 2 0.16422633024386124 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 101880 7414 SPLFSQHTA True PC9_epitope_Rep6 986.48214484806 986.48104993586 37.738 2 0.1642231114787273 0.0007870916961826052 0.9438714419765777 ['ENSG00000167721|ENST00000301364|TSR1'] 103787 17019 SRFPYYNSL True PC9_epitope_Rep2 1145.55055876105 1145.54946993586 70.713 2 0.1642203422828639 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-4|DENND3', 'ENST00000518198.1_1_8:142138775-142151424:+|nuORF'] 97053 6756 SEYIHAQVA True NCI_RA007_Epitope_Rep1 1016.4927095317598 1016.49160993586 30.288 2 0.16421923282964968 0.0007870916961826052 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 29292 19795 FVDPAQITM True PC9_epitope_Rep4 1020.49501803088 1020.49392993586 84.267 2 0.16421526612536524 0.0007870916961826052 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 114275 8662 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.58478993586 37.696 2 0.16420761254112468 0.0007870916961826052 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 138465 13705 YRFNGQYSSL True PC9_epitope_Rep4 1233.5778361380499 1233.5767299358602 60.604 2 0.16420192593145377 0.0007870916961826052 0.9438714419765777 ['ENSG00000182087|ENST00000356663|TMEM259'] 48551 4170 KEGKPPISV True H1975_Epitope_Rep3 953.5545815123298 953.55348993586 21.158 2 0.1641997273126386 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 29798 9572 FVTFESPADAK True H1975_Epitope_Rep3 1210.5870038394198 1210.5859099358602 41.827 2 0.16419735516725215 0.0007870916961826052 0.9438714419765777 ['RBMXL2|p.G376Efs*4|1|0.33|ENSG00000170748|chr11:7090246-7090246|G/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'ENSG00000175718|ENST00000424776|RBMXL3', 'ENSG00000147274|ENST00000320676|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'nc|ENSG00000147274|P38159-3|RBMX'] 45714 16348 ISLPKGVVEV True PC9_epitope_Rep6 1039.62774645259 1039.62664993586 75.259 2 0.1641854707473789 0.0007870916961826052 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 71992 12890 MQDDNQVMV True PC9_epitope_Rep5 1078.44233083502 1078.44122993586 54.591 2 0.16418445294976833 0.0007870916961826052 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 35821 15751 GTYTGFIKV True PC9_epitope_Rep4 984.5280324113198 984.52692993586 68.51 2 0.16418026924700196 0.0007870916961826052 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 103305 10091 SQTTVYEKL True PC9_epitope_Rep1 1067.54989005471 1067.5487899358602 43.687 2 0.16417759915476357 0.0007870916961826052 0.9438714419765777 ['ENSG00000118193|ENST00000367350|KIF14'] 95115 20438 RYVIIPTTF True PC9_epitope_Rep1 1108.6280808057597 1108.6269899358601 83.427 2 0.16417703566394512 0.0007870916961826052 0.9438714419765777 ['ENSG00000149260|ENST00000648180|CAPN5', 'ENST00000527129.1_1_11:76831698-76834913:+|nuORF'] 108440 5816 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 27.362 2 0.16417186820275959 0.0007870916961826052 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 45221 13822 IRKPYIWEY True PC9_epitope_Rep6 1266.67609362734 1266.6744449037901 64.97 3 0.1641700455033077 0.0007870916961826052 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 8313 19194 ATLNDGVVVQV True PC9_epitope_Rep5 1113.60298825673 1113.60188993586 78.869 2 0.16416978615889447 0.0007870916961826052 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000413279.1_1_2:136269117-136269381:-|nuORF'] 120421 22525 VFTEVANLF True PC9_epitope_Rep3 1038.53859709502 1038.53750993586 91.918 2 0.16416799724878697 0.0007870916961826052 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 24218 10352 EYVKQTWNL True NCI_RA007_Epitope_Rep3 1179.59242357303 1179.5913299358601 47.783 2 0.16416735258310458 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 81253 11888 PPPLPPPPP True PC9_epitope_Rep2 907.51673945163 907.51564993586 51.05 2 0.16416602139944236 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000135723|ENST00000258201|FHOD1', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000122574|ENST00000242140|WIPF3', 'ENSG00000090470|ENST00000204549|PDCD7'] 102763 4042 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 21.808 2 0.16416328114846035 0.0007870916961826052 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 7995 6847 ATDPNILGR True NCI_RA007_Epitope_Rep4 955.50869394907 955.50758993586 32.958 2 0.1641613627047797 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 73954 20134 NHMAVAFVL True PC9_epitope_Rep1 1000.5164221818 1000.51532993586 82.276 2 0.16415844462334547 0.0007870916961826052 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 132991 12096 VYVERAEVL True PC9_epitope_Rep4 1076.5866099165999 1076.58550993586 54.332 2 0.1641535816237824 0.0007870916961826052 0.9438714419765777 ['ENSG00000089234|ENST00000419234|BRAP'] 74760 19545 NLLQVLEKV True PC9_epitope_Rep6 1054.63864548946 1054.63754993586 87.843 2 0.1641494621790481 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF', 'CON__Q0VBK2'] 102523 16019 SQADVIPAV True PC9_epitope_Rep4 898.4759968384599 898.47488993586 69.55 2 0.16414587625083368 0.0007870916961826052 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 48839 9445 KESDIVLYA True H1975_Epitope_Rep1 1036.5440763982797 1036.5429699358601 41.245 2 0.1641422539397293 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 22153 12004 ESYSVYVYK True PC9_epitope_Rep4 1136.5389910178399 1136.5378899358602 53.97 2 0.16413456853156919 0.0007870916961826052 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 86933 4922 QRSGNVAEL True PC9_epitope_Rep4 972.4988575413598 972.49776993586 25.53 2 0.16412983300685477 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 1940 11873 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47456993586 50.668 2 0.16412749593006956 0.0007870916961826052 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 75999 21187 NRIQDLLEL True PC9_epitope_Rep5 1112.61897267404 1112.6178699358602 86.543 2 0.1641232531544992 0.0007870916961826052 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 75646 21477 NQSELAVLL True PC9_epitope_Rep3 985.5444107514498 985.54330993586 87.903 2 0.1641216536414463 0.0007870916961826052 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 107450 20635 SYVRSLPFF True PC9_epitope_Rep2 1114.5811306133398 1114.58002993586 84.807 2 0.16412147120154294 0.0007870916961826052 0.9438714419765777 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 8076 8844 ATEESDLAQQY True H1975_Epitope_Rep3 1253.54117584581 1253.5400699358602 39.024 2 0.16411010975411816 0.0007870916961826052 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 104237 9284 SSDPASQLSY True H1975_Epitope_Rep1 1053.46146897313 1053.4608749679298 40.623 1 0.16410202981335395 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 95064 14292 RYSGNQVLF True PC9_epitope_Rep1 1082.55089311422 1082.5497899358602 59.799 2 0.16408459132645392 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 88525 13080 RADPEAGLLLY True H1975_Epitope_Rep2 1216.6451874218799 1216.6440899358602 55.435 2 0.16408116919072427 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138346|P51530-3|DNA2', 'nc|ENSG00000138346|P51530-4|DNA2', 'ENSG00000138346|ENST00000358410|DNA2', 'nc|ENSG00000138346|P51530-2|DNA2', 'DNA2|p.S779Hfs*6|1|0.35|ENSG00000138346|chr10:68422764-68422764|A/-|frameshift_variant'] 40393 18231 HRTEMDWVL True PC9_epitope_Rep5 1185.5600778989299 1185.55843490379 75.137 3 0.16407130080650473 0.0007870916961826052 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 92133 11881 RQAELTVQV True PC9_epitope_Rep3 1042.57710786206 1042.5760099358602 50.717 2 0.16405601766854186 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR', 'ENST00000187830.2_1_19:45147391-45165075:+|nuORF'] 52501 12693 KPNPNQIISV True PC9_epitope_Rep3 1108.62405805448 1108.62296993586 53.848 2 0.1640558248686364 0.0007870916961826052 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 54348 7670 KYQEVTNNL True PC9_epitope_Rep4 1107.5560380643099 1107.5549499358601 36.883 2 0.16405503661633197 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 70976 6938 MEQELAHAV True H1975_Epitope_Rep3 1026.4804305958999 1026.4798749679298 31.648 1 0.1640460370406473 0.0007870916961826052 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 104778 12596 STDPLDAGVDY True H1975_Epitope_Rep1 1151.4982484046698 1151.49767496793 53.5 1 0.16404170932888792 0.0007870916961826052 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 13876 16193 DRDNVGLVL True PC9_epitope_Rep4 999.53490869691 999.53380993586 70.229 2 0.16404037206111424 0.0007870916961826052 0.9438714419765777 ['ENSG00000174606|ENST00000366962|ANGEL2', 'nc|ENSG00000174606|Q5VTE6-2|ANGEL2'] 91799 7931 RPLLKAITA True PC9_epitope_Rep6 981.63350053937 981.63240993586 39.948 2 0.16403185098402384 0.0007870916961826052 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 26771 17471 FLDPRPLTV True PC9_epitope_Rep4 1056.59678067748 1056.59568993586 75.2 2 0.16402777797543813 0.0007870916961826052 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 120015 21263 VFDPKVFTF True PC9_epitope_Rep1 1098.57498260374 1098.57388993586 86.613 2 0.164027348591827 0.0007870916961826052 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 132248 18455 VYKTIMEQF True PC9_epitope_Rep5 1157.57908200801 1157.5779899358602 76.008 2 0.16402560762663282 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 38036 4554 HEISEGNVATA True H1975_Epitope_Rep3 1126.52546621202 1126.52436993586 22.637 2 0.16402421226417932 0.0007870916961826052 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1'] 105593 10984 SVEERITQV True PC9_epitope_Rep5 1059.5560380643099 1059.5549499358601 47.239 2 0.16401245993714406 0.0007870916961826052 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 107210 20791 SYPDLLPTF True PC9_epitope_Rep6 1051.52261267771 1051.5215099358602 92.741 2 0.16401060224662806 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 74660 7914 NLGGLAVAR True NCI_RA007_Epitope_Rep2 869.5083000262499 869.50720993586 35.416 2 0.1640024290810633 0.0007870916961826052 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 14979 20727 DYSSILQKF True PC9_epitope_Rep2 1099.55497543515 1099.5538699358601 85.164 2 0.1639933241160517 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 91149 18006 RLPETLPSL True PC9_epitope_Rep2 1024.59169529704 1024.5905899358602 74.564 2 0.163990191846604 0.0007870916961826052 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 138076 12874 YQEELSREL True PC9_epitope_Rep1 1165.5615173675699 1165.5604299358602 54.394 2 0.16398517318114705 0.0007870916961826052 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 64540 9525 LRDENVNVV True PC9_epitope_Rep1 1056.5563724174801 1056.55526993586 41.495 2 0.16398325072378275 0.0007870916961826052 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 6073 15123 APMPPIIHA True PC9_epitope_Rep3 945.51060852537 945.50950993586 63.308 2 0.16398258949037942 0.0007870916961826052 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 82121 16951 PTDAFTVFY True H1975_Epitope_Rep3 1059.49131254943 1059.49020993586 70.784 2 0.16397957640348856 0.0007870916961826052 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 208 8293 AAFHQIEAV True NCI_RA007_Epitope_Rep4 984.5028802926398 984.50178993586 38.709 2 0.16397924592433188 0.0007870916961826052 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 67542 14396 LTEPTGLLY True H1975_Epitope_Rep2 1005.5382627418498 1005.53767496793 60.523 1 0.16397465614237836 0.0007870916961826052 0.9438714419765777 ['ENSG00000168758|ENST00000305476|SEMA4C'] 102836 20071 SQFQQEFPSL True PC9_epitope_Rep4 1209.5666027480097 1209.56550993586 85.339 2 0.16397457743370994 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 107280 19336 SYQKVIELF True PC9_epitope_Rep4 1125.6070110080097 1125.6059099358602 82.483 2 0.16397185147832705 0.0007870916961826052 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 75266 13158 NPNQYNYIA True PC9_epitope_Rep2 1095.49852318819 1095.49742993586 55.883 2 0.1639655764945128 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 135852 5478 YEQNDRLTP True H1975_Epitope_Rep3 1134.53055159246 1134.5294499358602 26.124 2 0.1639601767809242 0.0007870916961826052 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN'] 106392 6201 SVSTVLTSKYR True NCI_RA007_Epitope_Rep3 1239.68230120659 1239.6806549037901 31.399 3 0.16395882269550263 0.0007870916961826052 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 129664 15796 VTIEDVQKL True PC9_epitope_Rep2 1043.58627556343 1043.5851699358602 66.022 2 0.16395853189012266 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 134351 12331 WSDGHLIYY True H1975_Epitope_Rep3 1152.52400966004 1152.52290993586 52.614 2 0.16395297389683694 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-4|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2'] 26578 5605 FKDLGEEHFK True H1975_Epitope_Rep3 1248.6138872935996 1248.61225490379 26.6 3 0.16394495260764946 0.0007870916961826052 0.9438714419765777 ['CON__P02769'] 101534 15627 SPAPPLLHV True PC9_epitope_Rep1 929.53345214493 929.53234993586 64.928 2 0.16394274472407575 0.0007870916961826052 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 39799 18116 HQDSTWIVL True PC9_epitope_Rep6 1097.55055876105 1097.54946993586 82.318 2 0.16394070274672978 0.0007870916961826052 0.9438714419765777 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 40338 7855 HRSGIESAL True PC9_epitope_Rep5 968.5039429218 968.50284993586 35.157 2 0.16393792322505674 0.0007870916961826052 0.9438714419765777 ['ENSG00000114446|ENST00000264538|IFT57'] 104251 6818 SSDPDPAAY True H1975_Epitope_Rep3 921.3715913395699 921.3710449679301 31.179 1 0.16393190458505846 0.0007870916961826052 0.9438714419765777 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 76985 5254 NVSDAVAQSTR True NCI_RA007_Epitope_Rep1 1146.5629143499002 1146.56180993586 24.519 2 0.16392841583282536 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 14076 13477 DSDMQTLVY True H1975_Epitope_Rep2 1070.45902644498 1070.4579299358602 56.972 2 0.1639242730206064 0.0007870916961826052 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 75870 13270 NRDNVGLVL True PC9_epitope_Rep4 998.5508931142199 998.54978993586 58.94 2 0.16392286305533987 0.0007870916961826052 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 25219 9920 FEAPATINSA True H1975_Epitope_Rep2 1019.49237517859 1019.49126993586 43.146 2 0.16391480060973423 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 134957 16540 YAFPKAVSV True PC9_epitope_Rep5 980.5331177917599 980.53202993586 68.623 2 0.16391349545171863 0.0007870916961826052 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 93616 8759 RTDAILLGHY True H1975_Epitope_Rep1 1157.61930702721 1157.61820993586 38.623 2 0.16391030445754398 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000112146|Q9UK97-3|FBXO9', 'ENSG00000112146|ENST00000323557|FBXO9', 'nc|ENSG00000112146|Q9UK97|FBXO9', 'ENST00000474457.1_1_6:52958219-52962625:+|nuORF'] 40586 13214 HTDDPLTWDY True H1975_Epitope_Rep3 1261.52513185885 1261.52457496793 56.082 1 0.1638940912638629 0.0007870916961826052 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 4113 8777 AHTAEVNCL True PC9_epitope_Rep3 956.43856578392 956.43746993586 38.714 2 0.1638874022515323 0.0007870916961826052 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 31851 6054 GEPPKDYRIP True H1975_Epitope_Rep3 1170.6033226098998 1170.60166490379 28.301 3 0.1638864410954096 0.0007870916961826052 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 7536 3066 ASFDKAKLK True NCI_RA007_Epitope_Rep3 1006.58113061334 1006.58002993586 17.148 2 0.16388631196831163 0.0007870916961826052 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 106894 20032 SYILRPVAF True PC9_epitope_Rep3 1064.60186605792 1064.6007699358602 82.303 2 0.16388032194283092 0.0007870916961826052 0.9438714419765777 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.G520Afs*35|1|0.16|ENSG00000156222|chr15:84935495-84935495|G/-|frameshift_variant'] 128384 8415 VSDSGISTDY True H1975_Epitope_Rep1 1042.44548455582 1042.44497496793 37.296 1 0.1638799413863232 0.0007870916961826052 0.9438714419765777 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 116455 14883 TYADTLNHL True PC9_epitope_Rep5 1046.5032742154601 1046.5021699358601 62.251 2 0.1638756275186165 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.K1960N|1|0.26|ENSG00000151779|chr2:15238531-15238531|T/A|missense_variant'] 45116 18854 IQTAVRLLL True PC9_epitope_Rep4 1025.6597152872098 1025.65860993586 80.608 2 0.1638742388508574 0.0007870916961826052 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC4|p.R93G|1|0.26|ENSG00000278588|chr6:26123628-26123628|T/C|missense_variant', 'H2BC4|p.E94D|1|0.3|ENSG00000278588|chr6:26123623-26123623|C/A|missense_variant', 'H2BC7|p.E94D|1|0.38|ENSG00000277224|chr6:26199840-26199840|G/C|missense_variant', 'H2BC21|p.P104L|1|0.5|ENSG00000184678|chr1:149886330-149886330|G/A|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 132551 21605 VYPGYYLTF True PC9_epitope_Rep4 1121.54334812229 1121.5422499358601 91.29 2 0.16387106353843342 0.0007870916961826052 0.9438714419765777 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 24748 15712 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.4960299358602 68.362 2 0.16386988251212375 0.0007870916961826052 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 72295 4620 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep2 1081.43862573401 1081.43752993586 22.872 2 0.16386808098937478 0.0007870916961826052 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 82093 9027 PTAEDNLEY True H1975_Epitope_Rep2 1050.4505699362599 1050.4494699358602 39.674 2 0.1638676078238238 0.0007870916961826052 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL'] 26186 8926 FHSGDDSQVL True PC9_epitope_Rep2 1103.48835242731 1103.48724993586 39.691 2 0.16386545734314928 0.0007870916961826052 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3'] 21208 14824 ERFFSDKETF True PC9_epitope_Rep1 1304.6037165327195 1304.60206490379 61.842 3 0.16386363475838786 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 4411 12752 AIVDKVPSV True PC9_epitope_Rep2 926.54368247546 926.54258993586 54.355 2 0.16386132709001605 0.0007870916961826052 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 1907 9335 AEILSEMRA True H1975_Epitope_Rep2 1018.51173072418 1018.51062993586 40.868 2 0.16386059096787184 0.0007870916961826052 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 100003 19824 SLITRLLEV True PC9_epitope_Rep6 1042.63864548946 1042.63754993586 88.913 2 0.1638567470482078 0.0007870916961826052 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 83013 21690 PYISNIYLI True PC9_epitope_Rep4 1094.60119735158 1094.60010993586 91.632 2 0.1638565433405084 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 27451 10147 FNPFVTSDR True NCI_RA007_Epitope_Rep4 1081.51925863277 1081.5181699358602 45.889 2 0.16385609102566115 0.0007870916961826052 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 22223 9867 ETDKNGFLQY True H1975_Epitope_Rep3 1213.5615173675699 1213.5604299358602 42.982 2 0.16385462053759153 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 138386 12509 YRDNDSDLAL True PC9_epitope_Rep5 1180.53603089572 1180.5349299358602 53.115 2 0.16385376041336233 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2'] 2763 5845 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep3 863.3694835450299 863.36893496793 27.497 1 0.16384943003691477 0.0007870916961826052 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 4250 23514 AIIEYMPLL True PC9_epitope_Rep1 1061.5831047592899 1061.58200993586 95.233 2 0.16384584295826204 0.0007870916961826052 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 104779 12598 STDPLDAGVDY True H1975_Epitope_Rep1 1151.4982484046698 1151.49714993586 53.508 2 0.16384155010056015 0.0007870916961826052 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 7805 4530 ATAAAIGATPR True NCI_RA007_Epitope_Rep4 998.55089311422 998.54978993586 23.82 2 0.16384153140759225 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000540626.5_1_11:71714575-71718510:-|nuORF'] 64550 18557 LRDGQILEL True PC9_epitope_Rep1 1055.59750895347 1055.59640993586 76.169 2 0.1638353833378183 0.0007870916961826052 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 21590 4130 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 22.794 2 0.16383307349475842 0.0007870916961826052 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 38478 14739 HHALPITDL True PC9_epitope_Rep3 1015.54507945779 1015.5439899358599 61.832 2 0.1638210841459603 0.0007870916961826052 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 6717 17056 AQDEHLITF True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 70.624 2 0.16381853831360843 0.0007870916961826052 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 8894 19660 AVGELLQEV True PC9_epitope_Rep4 956.51786165044 956.51676993586 83.74 2 0.16381288492123816 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 75914 14920 NRDTQELLL True PC9_epitope_Rep5 1100.58258716532 1100.5814899358602 62.394 2 0.1638123960007784 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'EGFR-TEAD2|1|fusion', 'EGFR-TEAD2|3|fusion', 'EGFR-TEAD2|2|fusion', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 130681 14533 VVDEIFNEY True H1975_Epitope_Rep2 1126.51825557326 1126.51767496793 61.059 1 0.1638088240561788 0.0007870916961826052 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 129025 6817 VTADVINAAEK True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 31.175 2 0.16379175733133902 0.0007870916961826052 0.9438714419765777 ['PHGDH-HMGCS2|1|fusion', 'ENST00000496756.1_1_1:120254528-120263945:+|nuORF', 'ENSG00000092621|ENST00000641023|PHGDH'] 60178 13578 LHYPSTTAL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 57.25 2 0.16377776404573885 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 3470 12289 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep3 1042.5658747883201 1042.56476993586 52.448 2 0.16377577896757983 0.0007870916961826052 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 4106 12763 AHSVQPLSL True PC9_epitope_Rep5 950.51853035678 950.51742993586 54.1 2 0.1637744988219782 0.0007870916961826052 0.9438714419765777 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 49080 7001 KFTPVASKF True NCI_RA007_Epitope_Rep4 1023.5753169569099 1023.57420993586 33.554 2 0.1637733027118612 0.0007870916961826052 0.9438714419765777 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX', 'ENST00000446634.1_1_7:143080130-143081191:+|nuORF'] 34766 15127 GQSELASRLTL True PC9_epitope_Rep4 1173.6353510141698 1173.63424993586 66.113 2 0.16376653082733952 0.0007870916961826052 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21', 'nc|ENSG00000090487|Q9NZD8-2|SPG21'] 6672 8636 AQAPDLQRV True PC9_epitope_Rep3 996.5352430500799 996.53414993586 38.17 2 0.16376299442494935 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 15213 16384 EAFQLFDR True PC9_epitope_Rep6 1024.4977949121999 1024.49668993586 75.408 2 0.1637624914956882 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549017.5_1_12:56552185-56553840:+|nuORF'] 13902 12585 DRDPTAYAL True PC9_epitope_Rep2 1020.4876241513199 1020.48652993586 53.716 2 0.16375857293810922 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 94595 18545 RYKLYQEMF True PC9_epitope_Rep1 1276.6274291827597 1276.6263299358602 76.123 2 0.1637536958587404 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 97593 16816 SHADVVNLL True PC9_epitope_Rep1 966.51344497634 966.51234993586 69.509 2 0.1637512767256818 0.0007870916961826052 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 94893 5380 RYPDNLKHL True PC9_epitope_Rep4 1154.61964138038 1154.61799490379 27.421 3 0.16374917541632075 0.0007870916961826052 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 113692 9166 TRDETNYGI True PC9_epitope_Rep3 1067.4883524273098 1067.48724993586 40.196 2 0.16373932654034085 0.0007870916961826052 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 85346 9770 QLDHVNVYY True H1975_Epitope_Rep2 1149.54547338061 1149.54436993586 42.567 2 0.16373274281040856 0.0007870916961826052 0.9438714419765777 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 74276 19448 NIIELVHQV True PC9_epitope_Rep2 1063.60259433391 1063.6014899358602 80.187 2 0.1637301231232877 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 138931 13853 YSEEIVEMY True H1975_Epitope_Rep1 1161.4899922200898 1161.48888993586 58.434 2 0.16372673383751438 0.0007870916961826052 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 3876 10334 AHDDGRWSL True PC9_epitope_Rep1 1055.47845644995 1055.47734993586 44.632 2 0.163722629018159 0.0007870916961826052 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 114170 7070 TRSTFSTNY True PC9_epitope_Rep4 1075.49343780775 1075.4923499358601 34.459 2 0.16371528405998195 0.0007870916961826052 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 60162 13726 LHYPSTTAL True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 57.645 2 0.16371252434925013 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 105254 6713 STSQTFIYK True NCI_RA007_Epitope_Rep5 1073.5393253710097 1073.53822993586 32.495 2 0.16370300496728316 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 18693 9175 ELDDTLKY True H1975_Epitope_Rep1 995.4811417885501 995.48004993586 40.197 2 0.1636989642588205 0.0007870916961826052 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000472253.1_1_5:133533465-133534901:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 111028 11447 TLDNDIM[Oxidation]LIK True H1975_Epitope_Rep3 1190.6216754764198 1190.6205699358602 49.151 2 0.16369429674827723 0.0007870916961826052 0.9438714419765777 ['CON__P00761', 'nc|ENSG00000010438|P35030-5|PRSS3', 'ENSG00000010438|ENST00000379405|PRSS3', 'nc|ENSG00000010438|P35030-2|PRSS3', 'nc|ENSG00000010438|P35030-4|PRSS3', 'nc|ENSG00000010438|P35030|PRSS3'] 107003 19956 SYLKEFIHI True PC9_epitope_Rep1 1148.62299542532 1148.6213549037902 81.583 3 0.16369424833722837 0.0007870916961826052 0.9438714419765777 ['ENSG00000131966|ENST00000254286|ACTR10', 'ENST00000556312.5_1_14:58666935-58675849:+|nuORF', 'ENST00000556748.5_1_14:58666901-58681958:+|nuORF'] 70056 19124 LYHDIFSRL True PC9_epitope_Rep1 1162.61349337078 1162.6123899358602 78.35 2 0.1636912558486915 0.0007870916961826052 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 6339 6161 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 28.682 2 0.163681945007234 0.0007870916961826052 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 105930 13232 SVLDYFSER True NCI_RA007_Epitope_Rep3 1114.5294889632999 1114.52838993586 59.322 2 0.1636810587927272 0.0007870916961826052 0.9438714419765777 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6', 'ENST00000556044.5_1_14:71060086-71067354:-|nuORF', 'ENST00000556423.1_1_14:71063310-71067354:-|nuORF', 'ENST00000553611.5_1_14:71060082-71067354:-|nuORF', 'ENST00000554870.5_1_14:71059985-71067354:-|nuORF', 'ENST00000556495.5_1_14:71059591-71067354:-|nuORF', 'nc|ENSG00000133997|O75586-3|MED6'] 106919 9962 SYISRTNQL True PC9_epitope_Rep1 1080.5563724174801 1080.55526993586 43.183 2 0.163677847089502 0.0007870916961826052 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 3491 9653 AGLQFPVGR True NCI_RA007_Epitope_Rep3 943.5239500903898 943.52284993586 45.048 2 0.16367247489940306 0.0007870916961826052 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 45212 17583 IRKPYIWEY True PC9_epitope_Rep3 1266.67609362734 1266.6744449037901 72.822 3 0.16366791318115342 0.0007870916961826052 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 98533 14419 SILPAIFQK True NCI_RA007_Epitope_Rep2 1015.6066170851899 1015.60552993586 60.749 2 0.16366331524834768 0.0007870916961826052 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 131843 9472 VYASDRATF True PC9_epitope_Rep5 1028.4927095317598 1028.4916099358602 41.391 2 0.16365758933838503 0.0007870916961826052 0.9438714419765777 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 131784 11546 VYAILTHGI True NCI_RA007_Epitope_Rep3 985.5596668927699 985.55856993586 52.547 2 0.16365709213189378 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 140813 9953 YYSPTKNEI True PC9_epitope_Rep1 1113.53423999057 1113.5331499358601 43.146 2 0.16365432097377755 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 3981 21120 AHFDGLIFV True PC9_epitope_Rep2 1017.5283667644899 1017.52726993586 86.697 2 0.163650321587061 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 103563 18649 SRDELLQVL True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 79.81 2 0.16365027634397386 0.0007870916961826052 0.9438714419765777 ['ENSG00000187446|ENST00000334660|CHP1', 'ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'CHP1|p.R140L|1|0.6|ENSG00000187446|chr15:41278774-41278774|G/T|missense_variant'] 108706 3495 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 18.293 2 0.16364479704496415 0.0007870916961826052 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 43549 6219 IIEAEESR True NCI_RA007_Epitope_Rep1 945.47672511445 945.47562993586 28.226 2 0.16364210281017966 0.0007870916961826052 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000465508.5_1_1:6695737-6697639:-|nuORF', 'MED15-DNAJC11|1|fusion'] 77372 8861 NYLSHHLTI True NCI_RA007_Epitope_Rep4 1096.5665431783602 1096.5654499358602 40.905 2 0.16364002991603932 0.0007870916961826052 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 135285 15892 YAYTGVLQL True H1975_Epitope_Rep3 1026.53859709502 1026.53807496793 66.576 1 0.1636382458960698 0.0007870916961826052 0.9438714419765777 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4', 'KLHL4|p.Q238H|1|0.86|ENSG00000102271|chrX:87614557-87614557|G/T|missense_variant'] 138416 11823 YRDPYTGQSV True PC9_epitope_Rep1 1184.5462016566 1184.5451099358602 50.343 2 0.16363738499439462 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 64995 13294 LSDGLNSLTY True H1975_Epitope_Rep2 1081.52915461013 1081.52857496793 56.265 1 0.1636289292128241 0.0007870916961826052 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 18275 7115 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1176.6060254122801 1176.60436490379 31.666 3 0.1636287707343628 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 7918 13174 ATDDITELY True H1975_Epitope_Rep2 1039.47097102767 1039.46986993586 55.799 2 0.1636249128158784 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 4578 8109 ALAAGGYDVEK True PC9_epitope_Rep4 1092.54513902744 1092.5440499358601 38.645 2 0.16362428163893 0.0007870916961826052 0.9438714419765777 ['ENSG00000184357|ENST00000331442|H1-5'] 2204 5824 AENPKLISA True H1975_Epitope_Rep2 941.5181960036099 941.51708993586 27.393 2 0.16361939052802815 0.0007870916961826052 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 74593 13593 NLDPLTETY True H1975_Epitope_Rep2 1064.50260550912 1064.50207496793 57.422 1 0.16361652926963483 0.0007870916961826052 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 128417 10487 VSEDSSVTQIY True H1975_Epitope_Rep3 1226.56666231766 1226.56607496793 45.402 1 0.16361404465565849 0.0007870916961826052 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 28898 9970 FTEEELARY True H1975_Epitope_Rep2 1156.5400536469997 1156.53894993586 43.338 2 0.1636097291388078 0.0007870916961826052 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 24063 7644 EYQKVGQSF True PC9_epitope_Rep4 1084.5189242795998 1084.5178299358602 36.783 2 0.16360953836054323 0.0007870916961826052 0.9438714419765777 ['ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0-3|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 139304 8494 YTDMESEDY True H1975_Epitope_Rep1 1151.39648575807 1151.39597496793 37.602 1 0.16360914465343976 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 94092 4419 RVYGGLTTK True NCI_RA007_Epitope_Rep2 993.5607295219299 993.55962993586 21.822 2 0.1636022443667528 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 102629 22286 SQDAGIWYL True PC9_epitope_Rep5 1051.49746055903 1051.49636993586 90.729 2 0.16359635665329345 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 72755 10058 NADHTTLLL True NCI_RA007_Epitope_Rep5 996.52400966004 996.52290993586 45.327 2 0.16359452520838877 0.0007870916961826052 0.9438714419765777 ['ENSG00000160695|ENST00000621676|VPS11', 'nc|ENSG00000160695|Q9H270|VPS11'] 115422 16025 TVFDEAIRA True PC9_epitope_Rep1 1020.5240096600398 1020.52290993586 66.453 2 0.16358730549345088 0.0007870916961826052 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 116728 11432 TYLDKIKKF True PC9_epitope_Rep2 1154.66994561774 1154.6683049037902 49.293 3 0.1635870363627163 0.0007870916961826052 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 5010 19853 ALLDRIVSV True PC9_epitope_Rep2 984.59678067748 984.59568993586 81.756 2 0.163584807863507 0.0007870916961826052 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 104886 6988 STFDTQITK True NCI_RA007_Epitope_Rep1 1039.51858992643 1039.51748993586 31.18 2 0.16358477591985193 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 116956 16784 TYPIKTPTF True PC9_epitope_Rep5 1066.5698972233001 1066.5688099358601 69.566 2 0.16358446559582748 0.0007870916961826052 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 118587 7249 VEAFKTWKA True H1975_Epitope_Rep3 1078.5811306133398 1078.58002993586 32.855 2 0.16358305089058967 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000156414|Q8NDG6-2|TDRD9', 'ENSG00000156414|ENST00000409874|TDRD9'] 72532 23206 MVDGTLLLL True PC9_epitope_Rep5 973.5518046310099 973.55070993586 94.243 2 0.16358223309933345 0.0007870916961826052 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 72636 22232 MVWEGLNVV True PC9_epitope_Rep5 1045.52665251233 1045.52554993586 90.52 2 0.16358116744041787 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'NMT1-NME1|1|fusion'] 106292 6793 SVQVPRNLVGK True NCI_RA007_Epitope_Rep4 1195.7037053575098 1195.70206490379 32.751 3 0.1635782088614517 0.0007870916961826052 0.9438714419765777 ['TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion'] 99999 22280 SLITRLLEV True PC9_epitope_Rep1 1042.63864548946 1042.63754993586 90.511 2 0.16357104073436204 0.0007870916961826052 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 82996 19934 PYFNAPVYL True PC9_epitope_Rep6 1082.5436824754597 1082.5425899358602 89.335 2 0.16356860427405429 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 56752 11669 LEAPILVPHTA True H1975_Epitope_Rep2 1159.66010921003 1159.65900993586 49.957 2 0.16356204967331814 0.0007870916961826052 0.9438714419765777 ['ENSG00000223501|ENST00000445902|VPS52', 'nc|ENSG00000223501|Q8N1B4-2|VPS52'] 129412 5740 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.5229699358601 27.105 2 0.16356166566753047 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 72079 15653 M[Oxidation]RDPIRILV True PC9_epitope_Rep1 1127.64849936095 1127.64685490379 65.029 3 0.16355993413298317 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 133295 20453 WEMDNMLIQI True H1975_Epitope_Rep3 1291.59408044915 1291.59298993586 85.507 2 0.16355889612882496 0.0007870916961826052 0.9438714419765777 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 17166 14176 EHAEALLL True PC9_epitope_Rep4 894.4810822188999 894.47998993586 62.431 2 0.1635539350405631 0.0007870916961826052 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 6681 7071 AQAPDLQRV True PC9_epitope_Rep6 996.5352430500799 996.53414993586 36.225 2 0.1635538508701767 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 88930 6575 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 30.202 2 0.16354827253534385 0.0007870916961826052 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 76660 23006 NTIPLFVQL True PC9_epitope_Rep5 1043.60153170475 1043.6004299358601 93.483 2 0.16354447279125664 0.0007870916961826052 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'JUP|p.R582Q|1|0.15|ENSG00000173801|chr17:41758427-41758427|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 26528 21533 FIVDPVSNL True PC9_epitope_Rep5 1002.53859709502 1002.53750993586 87.863 2 0.1635340648152388 0.0007870916961826052 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 76822 17724 NVFDEAVRV True PC9_epitope_Rep2 1047.53490869691 1047.53380993586 73.457 2 0.1635329607549093 0.0007870916961826052 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1', 'ENST00000475867.5_1_10:5963439-5965826:+|nuORF'] 43995 14367 ILHENFTTV True PC9_epitope_Rep5 1072.55530978832 1072.5542099358602 60.263 2 0.1635268693266574 0.0007870916961826052 0.9438714419765777 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 21669 15507 ERVPINDVL True PC9_epitope_Rep2 1053.58185888933 1053.5807699358602 64.921 2 0.16352116156071533 0.0007870916961826052 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 74594 13691 NLDPLTETY True H1975_Epitope_Rep2 1064.50260550912 1064.50207496793 57.805 1 0.16352066914894464 0.0007870916961826052 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 107772 19564 TAMDVVYAL True PC9_epitope_Rep6 981.4841189940099 981.48302993586 87.917 2 0.16352002011802758 0.0007870916961826052 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 125118 17642 VLPKLYVKL True PC9_epitope_Rep5 1071.7056028504699 1071.7045099358602 72.872 2 0.16351846546748408 0.0007870916961826052 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000471178.2_1_19:35024355-35024547:-|nuORF', 'ENST00000444468.1_1_X:128542382-128542532:+|nuORF'] 136620 5590 YIDENQDRY True H1975_Epitope_Rep2 1214.52038083158 1214.5192899358601 26.504 2 0.16350975021801117 0.0007870916961826052 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2', 'CNDP2|p.W309Cfs*23|1|0.3|ENSG00000133313|chr18:74516250-74516250|G/-|frameshift_variant', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 11830 16914 DHMRFISEL True PC9_epitope_Rep2 1146.54917886206 1146.5480899358602 70.304 2 0.16350715778161026 0.0007870916961826052 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 4423 21359 AIVDLIHDI True PC9_epitope_Rep2 1007.5651461960299 1007.56404993586 87.626 2 0.1635037485286009 0.0007870916961826052 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 52743 15404 KQLSDTSIIAV True PC9_epitope_Rep2 1173.6605031328502 1173.6594099358601 64.532 2 0.16349897781536732 0.0007870916961826052 0.9438714419765777 ['ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000145743|Q9UF56-3|FBXL17', 'nc|ENSG00000145743|Q9UF56-2|FBXL17'] 129364 12292 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.5222499358601 52.365 2 0.16349538856011184 0.0007870916961826052 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 47680 21306 IYPSPTGVLI True PC9_epitope_Rep3 1058.60119735158 1058.60067496793 87.249 1 0.16349063047487364 0.0007870916961826052 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 96011 9712 SEAFSVASAA True H1975_Epitope_Rep3 938.4345259492999 938.43397496793 42.377 1 0.16348914870865594 0.0007870916961826052 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 3869 17007 AHDDAIWSV True PC9_epitope_Rep1 1012.46140940348 1012.46030993586 70.24 2 0.16348669133552776 0.0007870916961826052 0.9438714419765777 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 71150 5361 MEVEAPSKPA True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 25.665 2 0.1634824252582208 0.0007870916961826052 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 60160 13535 LHYPSTTAL True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 56.919 2 0.16347119254716294 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 132645 12427 VYQHLFTRI True PC9_epitope_Rep4 1175.6451278522297 1175.64349490379 55.604 3 0.16346945988636088 0.0007870916961826052 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 51972 5922 KKYKNIVLL True NCI_RA007_Epitope_Rep3 1117.7223155437698 1117.72120993586 30.273 2 0.16346533287134418 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16'] 39482 20166 HPAAFPLPVV True PC9_epitope_Rep5 1046.59130137422 1046.59020993586 82.617 2 0.1634628014287907 0.0007870916961826052 0.9438714419765777 ['ENSG00000108523|ENST00000262482|RNF167'] 130745 9954 VVDPNDPQM True PC9_epitope_Rep4 1013.44879611445 1013.44768993586 45.942 2 0.16346165796908246 0.0007870916961826052 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 136359 6049 YHDEADQSAL True PC9_epitope_Rep4 1147.47818166643 1147.47708993586 30.262 2 0.16346095263776322 0.0007870916961826052 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 4415 13533 AIVDKVPSV True PC9_epitope_Rep3 926.54368247546 926.54258993586 57.108 2 0.16345387265604766 0.0007870916961826052 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 27242 22833 FLVPTFEQL True PC9_epitope_Rep2 1092.5855472874398 1092.5844499358602 93.316 2 0.1634520273449003 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 21159 16041 ERDYTGYVL True PC9_epitope_Rep1 1114.5294889632999 1114.52838993586 66.516 2 0.16343737030924074 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000116138|Q9Y2G8-2|DNAJC16', 'ENSG00000116138|ENST00000375847|DNAJC16', 'ENST00000475133.5_1_1:15892828-15894669:+|nuORF'] 107047 15201 SYLPLAHMF True NCI_RA007_Epitope_Rep3 1077.53173789277 1077.53064993586 67.314 2 0.16343479377753242 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 47852 19454 IYTFPHSAF True PC9_epitope_Rep3 1081.5232813840498 1081.52218993586 80.057 2 0.16340927180299103 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 31923 13032 GEQWTPIEP True H1975_Epitope_Rep2 1055.4923751785898 1055.4912699358601 55.247 2 0.16340647538270797 0.0007870916961826052 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 60743 4403 LKDDEVAQLKK True NCI_RA007_Epitope_Rep1 1285.7241660185698 1285.7225249037901 21.241 3 0.16339932999803913 0.0007870916961826052 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 105931 13473 SVLDYFSER True NCI_RA007_Epitope_Rep4 1114.5294889632999 1114.52838993586 59.029 2 0.16339705502711402 0.0007870916961826052 0.9438714419765777 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6', 'ENST00000556044.5_1_14:71060086-71067354:-|nuORF', 'ENST00000556423.1_1_14:71063310-71067354:-|nuORF', 'ENST00000553611.5_1_14:71060082-71067354:-|nuORF', 'ENST00000554870.5_1_14:71059985-71067354:-|nuORF', 'ENST00000556495.5_1_14:71059591-71067354:-|nuORF', 'nc|ENSG00000133997|O75586-3|MED6'] 131846 18396 VYAVIPAEKF True PC9_epitope_Rep1 1135.62774645259 1135.62664993586 75.55 2 0.1633923299272416 0.0007870916961826052 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 37939 8615 HEEIAMATVTA True H1975_Epitope_Rep3 1171.55432381215 1171.5532299358601 38.13 2 0.16339175091472347 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 10083 7744 AYVHM[Oxidation]VTHF True PC9_epitope_Rep2 1119.5171508382302 1119.51604993586 35.162 2 0.16338558389671423 0.0007870916961826052 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 386 5254 AALEDKNSL True NCI_RA007_Epitope_Rep5 959.49237517859 959.49126993586 26.906 2 0.16338372542241694 0.0007870916961826052 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA1-ALDH3B1|1|fusion'] 90945 8097 RLFVGSIPK True NCI_RA007_Epitope_Rep1 1015.6178504752298 1015.61674993586 35.495 2 0.16337591713905672 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 89624 9321 RETETVFVP True H1975_Epitope_Rep3 1076.5502244078798 1076.54912993586 40.85 2 0.16337245095502465 0.0007870916961826052 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 133233 7040 WEEEAGRYAA True H1975_Epitope_Rep1 1180.5149015283198 1180.51380993586 32.112 2 0.16337028873235007 0.0007870916961826052 0.9438714419765777 ['ENST00000529712.5_1_11:47736424-47736610:-|nuORF'] 95640 12337 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 52.311 2 0.16336807679798168 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 106243 4607 SVQAPSYGAR True H1975_Epitope_Rep3 1034.5145076054998 1034.5134099358602 22.843 2 0.16336793040240122 0.0007870916961826052 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 103890 13718 SRLPEQVEL True PC9_epitope_Rep2 1069.57677350889 1069.57566993586 58.057 2 0.1633672189130537 0.0007870916961826052 0.9438714419765777 ['ENSG00000177666|ENST00000336615|PNPLA2', 'nc|ENSG00000177666|Q96AD5-2|PNPLA2'] 92214 19061 RQIDDILSV True PC9_epitope_Rep1 1057.57677350889 1057.57566993586 78.108 2 0.16336216678782856 0.0007870916961826052 0.9438714419765777 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000497973.5_1_1:46032543-46034819:+|nuORF'] 40344 6288 HRTDSEIAL True PC9_epitope_Rep2 1040.5250722892 1040.5239699358601 29.585 2 0.16335658840720943 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 107719 17623 TALLKIEGV True PC9_epitope_Rep5 942.57498260374 942.5744349679301 72.798 1 0.16335115356031646 0.0007870916961826052 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 88070 18721 QVVGGIYGV True PC9_epitope_Rep5 890.4861675993399 890.48561496793 77.028 1 0.16334537249189504 0.0007870916961826052 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 55047 22490 LALFPGVAL True PC9_epitope_Rep4 899.5480395799099 899.5474949679301 94.739 1 0.16334223380969323 0.0007870916961826052 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 115137 5915 TVADHIQKV True PC9_epitope_Rep1 1009.5556441414899 1009.55454993586 27.566 2 0.16333680920831198 0.0007870916961826052 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 21386 19662 ERMGLAISL True PC9_epitope_Rep5 988.5375515491999 988.53644993586 80.686 2 0.16333134222430312 0.0007870916961826052 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 32137 18795 GFAFVQYVNER True PC9_epitope_Rep4 1328.65133543148 1328.6502299358601 80.381 2 0.1633302362039685 0.0007870916961826052 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC'] 70280 18138 LYPDHFHLL True PC9_epitope_Rep2 1153.59202965021 1153.59092993586 75.071 2 0.16332784674098005 0.0007870916961826052 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 8854 13842 AVFPSIVGRPR True PC9_epitope_Rep1 1197.69822605425 1197.6965849037902 58.087 3 0.1633218718975542 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 83970 8812 QELPPPPPP True H1975_Epitope_Rep2 970.5123823471798 970.51128993586 38.862 2 0.16331843711699623 0.0007870916961826052 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 129899 5161 VTLTSEEEAR True H1975_Epitope_Rep3 1133.5564319871298 1133.55532993586 24.955 2 0.1633184204165791 0.0007870916961826052 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 97615 14290 SHAENILQI True PC9_epitope_Rep4 1023.53490869691 1023.53380993586 62.866 2 0.16331079947627644 0.0007870916961826052 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 95561 9107 SASFEPFSNK True NCI_RA007_Epitope_Rep2 1112.5138388991597 1112.51274993586 40.03 2 0.16329387273582663 0.0007870916961826052 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 17259 17688 EHASSLLEL True PC9_epitope_Rep1 997.5080252427299 997.50692993586 72.831 2 0.16329245194549086 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 21337 13723 ERLGQFM[Oxidation]TL True PC9_epitope_Rep6 1109.55393026977 1109.55282993586 64.573 2 0.1632901058181364 0.0007870916961826052 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 75720 8639 NQWDGTQHGV True PC9_epitope_Rep1 1140.49483479008 1140.49372993586 38.068 2 0.16328017214272128 0.0007870916961826052 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 8133 9626 ATETQPIVY True H1975_Epitope_Rep3 1020.5127762699997 1020.51166993586 42.042 2 0.16327387405036953 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 116703 18508 TYKDYVDLF True PC9_epitope_Rep6 1162.55464108198 1162.55354993586 83.832 2 0.1632695149063518 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 2162 6022 AEMGTHTVSV True H1975_Epitope_Rep2 1030.4753452154598 1030.4742499358601 28.142 2 0.16326836902470793 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF'] 2500 13051 AEQPYFIEA True H1975_Epitope_Rep2 1066.49712620586 1066.49657496793 55.322 1 0.16326298531890351 0.0007870916961826052 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B'] 29178 20175 FVADEELVHL True PC9_epitope_Rep1 1170.5920892198599 1170.59098993586 82.432 2 0.16326102242993457 0.0007870916961826052 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51', 'ENST00000530673.1_2_11:64878667-64879056:+|nuORF', 'ENST00000533827.5_1_11:64876997-64879056:+|nuORF'] 52504 11210 KPNPNQIISV True PC9_epitope_Rep4 1108.62405805448 1108.62296993586 50.895 2 0.163259124530905 0.0007870916961826052 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 98044 13174 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep6 1277.7343370957499 1277.7332299358602 62.318 2 0.16325793546165804 0.0007870916961826052 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 2114 8289 AELQRLVAA True H1975_Epitope_Rep1 969.5607295219298 969.55962993586 36.816 2 0.16325073396411796 0.0007870916961826052 0.9438714419765777 ['ENSG00000150779|ENST00000504148|TIMM8B'] 98415 22628 SIINFFERL True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 92.037 2 0.16323538345456456 0.0007870916961826052 0.9438714419765777 ['ENSG00000116793|ENST00000369604|PHTF1', 'PHTF1|p.S622Ffs*15|1|0.3|ENSG00000116793|chr1:113704106-113704107|-/A|frameshift_variant', 'nc|ENSG00000116793|Q9UMS5-2|PHTF1', 'ENST00000481652.1_1_1:114242829-114248598:-|nuORF'] 76610 18160 NTFTKLITV True PC9_epitope_Rep4 1035.59644632431 1035.5953499358602 77.916 2 0.16323358836545093 0.0007870916961826052 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB'] 89665 5042 REVDPPM[Oxidation]GP True H1975_Epitope_Rep2 1012.4647809121999 1012.46368993586 24.476 2 0.16323345977363596 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 104124 19237 SRYPDQWIV True PC9_epitope_Rep3 1162.57710786206 1162.5760099358602 79.215 2 0.16323324662190486 0.0007870916961826052 0.9438714419765777 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 72296 4215 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep3 1081.43862573401 1081.43752993586 21.331 2 0.1632279900066881 0.0007870916961826052 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 93689 10896 RTLAEIAKV True PC9_epitope_Rep5 999.6076797143498 999.60658993586 46.899 2 0.16321710211640325 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 86577 9065 QRDEKVLEL True PC9_epitope_Rep2 1128.6138872935999 1128.61225490379 40.214 3 0.16320230809340758 0.0007870916961826052 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 74535 19745 NLAEKLIGV True PC9_epitope_Rep1 955.5702315764698 955.56912993586 80.776 2 0.16320207947223073 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 47821 15316 IYSIDFTRF True NCI_RA007_Epitope_Rep4 1160.5866099165999 1160.58550993586 66.568 2 0.16320095066216903 0.0007870916961826052 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B'] 132521 18727 VYPEYVIQY True PC9_epitope_Rep6 1172.57537652656 1172.57426993586 84.674 2 0.16319826176848945 0.0007870916961826052 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 13968 16921 DRNAVIVAL True PC9_epitope_Rep2 969.5607295219299 969.55962993586 70.33 2 0.1631968475969304 0.0007870916961826052 0.9438714419765777 ['PTGES3-UBE2K|1|fusion', 'nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K'] 21408 19463 ERNDLIVFL True PC9_epitope_Rep6 1117.6131590176099 1117.61206993586 87.527 2 0.163196526066729 0.0007870916961826052 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1'] 73869 16132 NHFPGSFQI True PC9_epitope_Rep6 1045.49812926537 1045.4970299358602 74.394 2 0.16319013284603445 0.0007870916961826052 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 74980 21358 NLVRELLAV True PC9_epitope_Rep5 1025.6233297784897 1025.62222993586 87.212 2 0.16318054113894442 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 2296 7027 AEPVEVVAPR True H1975_Epitope_Rep3 1065.5818588893299 1065.5807699358602 31.992 2 0.16317177913257555 0.0007870916961826052 0.9438714419765777 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000413631.1_1_13:111590511-111591024:+|nuORF'] 7863 4021 ATALPTGTSK True NCI_RA007_Epitope_Rep4 945.5131106231701 945.51200993586 21.724 2 0.16317168818082536 0.0007870916961826052 0.9438714419765777 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1'] 32630 10197 GHFNSMVAL True NCI_RA007_Epitope_Rep3 974.4643866089399 974.46328993586 47.194 2 0.1631716334095205 0.0007870916961826052 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45539071-45541135:+|nuORF'] 17347 10385 EHDPVGQMV True PC9_epitope_Rep5 1010.44913046762 1010.44802993586 44.929 2 0.16316646733410672 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 40249 13772 HRIQDLEQL True PC9_epitope_Rep3 1150.6094706195 1150.60836993586 58.054 2 0.16316426609547094 0.0007870916961826052 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 101877 7776 SPLFSQHTA True PC9_epitope_Rep4 986.48214484806 986.48104993586 37.307 2 0.163153374922043 0.0007870916961826052 0.9438714419765777 ['ENSG00000167721|ENST00000301364|TSR1'] 96162 8316 SEEEISFRA True H1975_Epitope_Rep3 1066.49310345458 1066.49200993586 36.97 2 0.16315327643973507 0.0007870916961826052 0.9438714419765777 ['ENSG00000162928|ENST00000295030|PEX13'] 14074 13406 DSDMQTLVY True H1975_Epitope_Rep1 1070.45902644498 1070.4579299358602 56.679 2 0.16315204628023725 0.0007870916961826052 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 27910 20223 FQLRSFDQL True PC9_epitope_Rep1 1152.5927579261997 1152.5916699358602 82.617 2 0.16315121182868125 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 86499 14653 QRAAVIGDVI True PC9_epitope_Rep2 1040.5978433066398 1040.59674993586 61.629 2 0.16314956059295185 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 74404 20724 NIVDKFVIV True PC9_epitope_Rep5 1045.61718176889 1045.6160899358601 84.772 2 0.16314617986824712 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 86955 9567 QRVDSPVTV True PC9_epitope_Rep1 999.5349086969098 999.53380993586 41.658 2 0.16314305112957442 0.0007870916961826052 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 94943 9708 RYPDSHQLF True PC9_epitope_Rep6 1161.55670677065 1161.5550749037902 47.739 3 0.16313684116688307 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 132599 13038 VYPPPHQVF True PC9_epitope_Rep5 1082.5549158654999 1082.55380993586 55.154 2 0.1631245926001159 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 61693 18255 LLIDDKGTIKL True PC9_epitope_Rep5 1227.74383883399 1227.74218490379 75.232 3 0.16311954125412914 0.0007870916961826052 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 4290 6233 AIITPPPAK True NCI_RA007_Epitope_Rep4 906.5538532363399 906.55274993586 30.58 2 0.16311952523651194 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 87407 13040 QTDQMVFNAY True H1975_Epitope_Rep2 1215.52302368387 1215.5224749679298 55.278 1 0.16311860597098687 0.0007870916961826052 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 17819 7918 EIAEAYLGK True H1975_Epitope_Rep1 992.5178616504398 992.51676993586 35.407 2 0.1631059313703095 0.0007870916961826052 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 47996 8985 KAIEQADLL True NCI_RA007_Epitope_Rep4 999.5600608155898 999.55896993586 41.396 2 0.16309527111411637 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000182287|P56377|AP1S2', 'ENSG00000106367|ENST00000337619|AP1S1', 'ENSG00000182287|ENST00000672987|AP1S2', 'nc|ENSG00000182287|P56377-2|AP1S2'] 47746 13512 IYQKYIARF True PC9_epitope_Rep5 1200.6655289436396 1200.6638849037902 56.993 3 0.16308353709415993 0.0007870916961826052 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'CASZ1|p.I804Yfs*73|1|0.28|ENSG00000130940|chr1:10653648-10653648|G/-|frameshift_variant', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 105998 19470 SVLKSLVEI True PC9_epitope_Rep2 986.6011973515799 986.60010993586 80.271 2 0.16307799417786678 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 40388 15901 HRTEMDWVL True PC9_epitope_Rep4 1185.5600778989299 1185.5589899358602 69.092 2 0.16307554549370096 0.0007870916961826052 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 67544 14305 LTEPTGLLY True H1975_Epitope_Rep3 1005.5382627418498 1005.53767496793 60.37 1 0.16307251143146156 0.0007870916961826052 0.9438714419765777 ['ENSG00000168758|ENST00000305476|SEMA4C'] 138784 13373 YSDEEELLY True H1975_Epitope_Rep2 1159.4921003950699 1159.4910099358601 56.572 2 0.16306948264312227 0.0007870916961826052 0.9438714419765777 ['SPATA7|p.N454Kfs*2|1|0.36|ENSG00000042317|chr14:88437977-88437978|-/A|frameshift_variant', 'nc|ENSG00000042317|Q9P0W8-3|SPATA7', 'ENST00000556666.5_1_14:88883017-88904763:+|nuORF', 'SPATA7|p.E535Kfs*4|1|0.13|ENSG00000042317|chr14:88438223-88438223|G/-|frameshift_variant', 'nc|ENSG00000042317|Q9P0W8-2|SPATA7', 'ENSG00000042317|ENST00000393545|SPATA7'] 21088 8389 ERDPATYNI True PC9_epitope_Rep6 1077.5090878718902 1077.50798993586 41.936 2 0.16306394704723612 0.0007870916961826052 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 103475 7544 SRAPSQVSI True PC9_epitope_Rep5 943.50869394907 943.50758993586 33.967 2 0.16305891314322457 0.0007870916961826052 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2', 'nc|ENSG00000166833|Q8IVL1-7|NAV2'] 95006 12932 RYQFLEEAF True NCI_RA007_Epitope_Rep3 1201.57677350889 1201.57566993586 58.137 2 0.16305613823519582 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 102636 15503 SQDARFYAL True PC9_epitope_Rep5 1069.51925863277 1069.5181699358602 64.642 2 0.16305588860886652 0.0007870916961826052 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 2151 14034 AELYGPFTSA True H1975_Epitope_Rep2 1054.49712620586 1054.4960299358602 59.134 2 0.1630558460302468 0.0007870916961826052 0.9438714419765777 ['ENSG00000169217|ENST00000305596|CD2BP2'] 31243 5857 GDLYEEEM[Oxidation]R True NCI_RA007_Epitope_Rep2 1156.47065413828 1156.4695499358602 27.401 2 0.16305489276671925 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 26090 17785 FHEGDVITL True PC9_epitope_Rep5 1029.51311062317 1029.51200993586 73.427 2 0.1630511714130587 0.0007870916961826052 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 96665 10243 SENPSVYVP True NCI_RA007_Epitope_Rep3 990.4658260775799 990.46472993586 47.368 2 0.1630509686065162 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 95446 21048 SALPDIKVLTL True PC9_epitope_Rep2 1168.7067250492798 1168.70562993586 86.415 2 0.16304871996931827 0.0007870916961826052 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 139691 11208 YTTDRVMTV True PC9_epitope_Rep5 1084.5222954078802 1084.52118993586 48.099 2 0.163029950322424 0.0007870916961826052 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 21615 21180 ERSPLLFTL True PC9_epitope_Rep5 1074.60734536118 1074.6062499358602 86.52 2 0.16302915377022645 0.0007870916961826052 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 53808 13183 KYFLWEEKF True NCI_RA007_Epitope_Rep5 1288.6492101731599 1288.64810993586 57.386 2 0.16302752220218067 0.0007870916961826052 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 89739 6078 REYQLNDSAA True NCI_RA007_Epitope_Rep1 1165.53636524889 1165.53526993586 27.68 2 0.16302636781259647 0.0007870916961826052 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 8860 14025 AVFPSIVGRPR True PC9_epitope_Rep3 1197.69822605425 1197.6965849037902 59.034 3 0.16302515911170776 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 106657 23120 SYADQMFLL True PC9_epitope_Rep1 1086.50558271458 1086.5044899358602 93.725 2 0.16302139027187856 0.0007870916961826052 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 114583 4683 TSLDKFYRK True NCI_RA007_Epitope_Rep3 1156.6240580544797 1156.62241490379 25.367 3 0.16302111913740358 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3'] 138702 16995 YRVFTTQEL True PC9_epitope_Rep3 1155.5924235730297 1155.5913299358601 70.531 2 0.163017936719014 0.0007870916961826052 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 127088 12491 VQANSGAIVKL True PC9_epitope_Rep1 1098.6397081186199 1098.6386099358601 52.914 2 0.16301775404707755 0.0007870916961826052 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 105643 20943 SVFKDFYEL True PC9_epitope_Rep5 1146.55972646242 1146.5586299358602 85.615 2 0.16300803077268955 0.0007870916961826052 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB'] 125716 8560 VNELTEFAK True H1975_Epitope_Rep1 1049.53932537101 1049.53822993586 37.852 2 0.1630067324488172 0.0007870916961826052 0.9438714419765777 ['CON__P02769'] 86610 12086 QRDPNSPLYSV True PC9_epitope_Rep2 1274.62551460646 1274.62440993586 51.798 2 0.16300532742903134 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF'] 65326 11334 LSELEPATEY True H1975_Epitope_Rep2 1150.5393849406598 1150.53887496793 48.646 1 0.16300453366658194 0.0007870916961826052 0.9438714419765777 ['ENSG00000145623|ENST00000274276|OSMR'] 89108 5011 REFDRRFSP True NCI_RA007_Epitope_Rep5 1208.6050539453997 1208.60341490379 25.978 3 0.16300290197258077 0.0007870916961826052 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 38722 20343 HHSSVIFIF True PC9_epitope_Rep3 1085.56581490237 1085.56470993586 83.498 2 0.16299921950792437 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 25720 17023 FFKPHWDEKF True PC9_epitope_Rep5 1379.6662572196294 1379.6646149037902 70.497 3 0.16299466829990863 0.0007870916961826052 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 24153 18626 EYTAKIALL True PC9_epitope_Rep5 1020.5855472874399 1020.58444993586 76.67 2 0.16299238880097788 0.0007870916961826052 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 35038 6821 GRDENSVEL True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 31.643 2 0.1629910534841345 0.0007870916961826052 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 135458 5378 YEAPGVREA True NCI_RA007_Epitope_Rep4 990.4770594676198 990.47596993586 27.254 2 0.16298268439262176 0.0007870916961826052 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 86282 9701 QQDPQQYNV True PC9_epitope_Rep5 1118.49925146418 1118.49814993586 42.283 2 0.16298255004931875 0.0007870916961826052 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 2592 8084 AESIDNPLHEA True H1975_Epitope_Rep1 1194.55168095986 1194.5505899358602 36.038 2 0.16298119851470025 0.0007870916961826052 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 35475 16120 GTFATLSELH True PC9_epitope_Rep2 1074.53457434374 1074.53346993586 67.263 2 0.16297749726098193 0.0007870916961826052 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 113690 8149 TRDETNYGI True PC9_epitope_Rep2 1067.4883524273098 1067.48724993586 36.701 2 0.16297336325983505 0.0007870916961826052 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 75655 19366 NQSGQVFGL True PC9_epitope_Rep1 948.4664947839199 948.46538993586 79.298 2 0.1629545814039078 0.0007870916961826052 0.9438714419765777 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 33817 8931 GLTSVINQK True PC9_epitope_Rep2 958.5447451046199 958.54364993586 39.71 2 0.1629412793020839 0.0007870916961826052 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 26219 11873 FHVEPGLQRL True PC9_epitope_Rep6 1194.6509415086598 1194.6493049037902 56.888 3 0.1629388183861951 0.0007870916961826052 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 3046 10230 AFVTFDDHD True NCI_RA007_Epitope_Rep4 1065.4403396057298 1065.43924993586 46.206 2 0.16293045554051636 0.0007870916961826052 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 36559 19853 GVLDTLTKV True PC9_epitope_Rep1 944.55424715916 944.55314993586 81.181 2 0.16292078144411407 0.0007870916961826052 0.9438714419765777 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 110411 16024 TIMPKDIQL True PC9_epitope_Rep6 1057.58416738845 1057.58306993586 73.962 2 0.162919907727434 0.0007870916961826052 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'H3-5|p.R128H|1|0.5|ENSG00000188375|chr12:31791784-31791784|C/T|missense_variant', 'ENST00000404612.1_1_6:26322106-26322214:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 30008 19199 FYHKYFNYL True PC9_epitope_Rep1 1293.61824439805 1293.6166049037902 78.644 3 0.16291846726403425 0.0007870916961826052 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 86789 13969 QRNEVVVEL True PC9_epitope_Rep3 1084.58767254576 1084.58656993586 58.806 2 0.16291307315684153 0.0007870916961826052 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 25644 11931 FEWENKVTV True NCI_RA007_Epitope_Rep5 1150.56587447202 1150.56476993586 52.55 2 0.1629082540096493 0.0007870916961826052 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 17707 17493 EHSLVIDTL True PC9_epitope_Rep1 1025.53932537101 1025.53822993586 72.081 2 0.16290462851560888 0.0007870916961826052 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 90884 11089 RLASYLDKV True PC9_epitope_Rep4 1063.60259433391 1063.6014899358602 50.429 2 0.16290019136306458 0.0007870916961826052 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P05784', 'ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 96234 4941 SEEPETPAA True H1975_Epitope_Rep3 929.3978060874099 929.39670993586 24.133 2 0.16289879471082522 0.0007870916961826052 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 74237 14755 NIDPITMAY True H1975_Epitope_Rep1 1036.48993265044 1036.4888299358602 61.978 2 0.16288684212702628 0.0007870916961826052 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 139356 8843 YTDSYTDTY True H1975_Epitope_Rep3 1127.42950013851 1127.4284099358601 39.02 2 0.16288138203311892 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 110087 20914 TIAEGLTLAQV True PC9_epitope_Rep5 1114.62338934814 1114.6228749679299 85.5 1 0.16287172676632444 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 98195 14025 SIDSLQLGY True H1975_Epitope_Rep2 994.49712620586 994.4965749679301 59.097 1 0.16287047402699056 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 75510 20207 NQITQLESL True PC9_epitope_Rep5 1044.54513902744 1044.5440499358601 82.772 2 0.1628684795600081 0.0007870916961826052 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 29207 19875 FVCDIRPEI True PC9_epitope_Rep3 1090.5481162329 1090.5470099358602 81.687 2 0.16286696068874634 0.0007870916961826052 0.9438714419765777 ['ENSG00000136888|ENST00000374050|ATP6V1G1'] 71324 20131 MHFQLPIQA True PC9_epitope_Rep5 1083.55353596651 1083.5524299358601 82.481 2 0.16286631631450754 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 118700 4501 VECPPPRTTA True H1975_Epitope_Rep2 1069.52262976105 1069.5215299358601 22.424 2 0.16286590479897567 0.0007870916961826052 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 122 20132 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.5056249679301 83.429 1 0.16286387422054688 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 133271 12250 WEIENNPTV True H1975_Epitope_Rep1 1100.51383889916 1100.51274993586 52.143 2 0.16285696829389362 0.0007870916961826052 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 107025 14835 SYLNSVQRL True PC9_epitope_Rep5 1078.5771078620598 1078.5760099358602 62.065 2 0.16284508897491434 0.0007870916961826052 0.9438714419765777 ['ENSG00000136243|ENST00000258742|NUP42', 'nc|ENSG00000136243|O15504-2|NUP42'] 39970 13198 HQQSIPAVL True PC9_epitope_Rep3 991.5450794577898 991.5439899358599 55.803 2 0.16284380742274276 0.0007870916961826052 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 106018 13434 SVLNLVIVK True NCI_RA007_Epitope_Rep1 983.6379172134699 983.63682993586 56.261 2 0.16284371416185345 0.0007870916961826052 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 101127 12302 [Acetylation]-SLVIPEKFQH True H1975_Epitope_Rep1 1238.66592318276 1238.66482993586 52.346 2 0.1628425856225983 0.0007870916961826052 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 136556 14544 YHSEVPVSL True PC9_epitope_Rep5 1029.51311062317 1029.51200993586 60.943 2 0.16282845994244016 0.0007870916961826052 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 696 11208 AAVFGVTRL True H1975_Epitope_Rep2 932.5443511817999 932.54324993586 48.152 2 0.16281191246320698 0.0007870916961826052 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 137187 14037 YLDTVPEVY True H1975_Epitope_Rep2 1097.52809198097 1097.52698993586 59.145 2 0.16281115845597605 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 33819 7952 GLTSVINQK True PC9_epitope_Rep6 958.5447451046199 958.54364993586 40.035 2 0.16280639105661937 0.0007870916961826052 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 86942 7399 QRSQTQTIL True PC9_epitope_Rep5 1073.58292151849 1073.58182993586 33.417 2 0.16279939520281442 0.0007870916961826052 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1'] 60163 12589 LHYPSTTAL True PC9_epitope_Rep2 1001.51819600361 1001.51708993586 53.732 2 0.16279386476682456 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 88864 5369 REAEFTKSIA True NCI_RA007_Epitope_Rep4 1150.59823722946 1150.5965849037902 27.218 3 0.16279184096192564 0.0007870916961826052 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 37543 21324 GYMEGYYTF True PC9_epitope_Rep5 1129.44264810485 1129.4415499358602 87.079 2 0.16278912944978827 0.0007870916961826052 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 67622 5189 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 25.032 2 0.16278258022642456 0.0007870916961826052 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 96778 11238 SEQVPLMSA True H1975_Epitope_Rep2 960.4586325221599 960.4580849679301 48.27 1 0.16278079747905272 0.0007870916961826052 0.9438714419765777 ['ENST00000551200.5_1_12:102471044-102512308:-|nuORF', 'ENSG00000075188|ENST00000552283|NUP37'] 87375 6297 QTDKLKELY True H1975_Epitope_Rep3 1136.6077392839998 1136.6060849037901 29.226 3 0.16278075290022967 0.0007870916961826052 0.9438714419765777 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 88338 19566 QYLQDAYSF True PC9_epitope_Rep4 1133.5029398622898 1133.5023749679299 83.383 1 0.1627802593093025 0.0007870916961826052 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 85486 18206 QLIDIIHTA True PC9_epitope_Rep4 1022.5760452329 1022.57494993586 78.098 2 0.16277295780481102 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 77405 19032 NYLVLPNRI True PC9_epitope_Rep2 1100.63422881536 1100.63312993586 78.571 2 0.16277141043611007 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2'] 23836 16974 EYLLKVNEI True PC9_epitope_Rep6 1119.61757569171 1119.61646993586 77.835 2 0.16276676911246893 0.0007870916961826052 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 135935 12048 YEWVNPAA True H1975_Epitope_Rep3 948.4341320264798 948.4335849679301 51.504 1 0.1627593868143407 0.0007870916961826052 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 74538 18225 NLAEKLIGV True PC9_epitope_Rep4 955.5702315764698 955.56912993586 78.173 2 0.1627540218949771 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 53936 4842 KYISKPENL True NCI_RA007_Epitope_Rep5 1090.60225998074 1090.60116993586 25.316 2 0.16275087429033117 0.0007870916961826052 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 61230 20579 LLDPSVFHV True PC9_epitope_Rep5 1025.5545815123298 1025.5534899358602 84.204 2 0.16275006647405696 0.0007870916961826052 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 70820 12207 MEENPGIFA True H1975_Epitope_Rep3 1006.4429824580199 1006.44188993586 52.126 2 0.16274459228048171 0.0007870916961826052 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1'] 71309 10559 MHEENVYTV True PC9_epitope_Rep1 1120.4859098991599 1120.48480993586 45.506 2 0.16273612094253004 0.0007870916961826052 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000565298.5_1_16:1576517-1634259:-|nuORF'] 21798 13818 ESDLDYIQY True H1975_Epitope_Rep3 1144.4924347482402 1144.4913299358602 58.456 2 0.1627336004419964 0.0007870916961826052 0.9438714419765777 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 99269 21345 SLDDLLTNV True PC9_epitope_Rep4 988.5076908895601 988.50658993586 90.272 2 0.16272820177808073 0.0007870916961826052 0.9438714419765777 ['ENSG00000143819|ENST00000272167|EPHX1'] 6883 11491 AQIKEM[Oxidation]VEL True PC9_epitope_Rep5 1075.55834694387 1075.55724993586 49.196 2 0.16272620397535814 0.0007870916961826052 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 97953 9116 SHQTGVVAL True PC9_epitope_Rep1 910.4872302284999 910.48612993586 39.915 2 0.16272077631876425 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 90950 7427 RLFVGSIPK True NCI_RA007_Epitope_Rep3 1015.6178504752298 1015.61674993586 36.339 2 0.16271999665071907 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 65126 4924 LSDPSGPKSY True H1975_Epitope_Rep3 1049.50293986229 1049.50184993586 24.066 2 0.16271936244185287 0.0007870916961826052 0.9438714419765777 ['RPS6KC1|p.K880Ffs*6|1|0.26|ENSG00000136643|chr1:213242113-213242120|CAAGGAAA/TTT|frameshift_variant', 'nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 113516 11410 TQTAVITRI True PC9_epitope_Rep3 1001.5869442697699 1001.58584993586 48.89 2 0.16271784782336193 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 96228 4743 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 23.335 1 0.16271543459412538 0.0007870916961826052 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 103436 7610 SRAAEKLYL True PC9_epitope_Rep2 1049.58694426977 1049.58584993586 34.645 2 0.1626964227214755 0.0007870916961826052 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 48584 13123 KEIEEIPAYLP True H1975_Epitope_Rep2 1300.6914689079597 1300.6903699358602 55.6 2 0.16269260487856813 0.0007870916961826052 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 11605 17783 DHAEFSYVL True PC9_epitope_Rep6 1079.49237517859 1079.4912699358601 81.037 2 0.1626917427390458 0.0007870916961826052 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 22678 10818 ETTFLVDKY True H1975_Epitope_Rep2 1114.5546410819798 1114.55354993586 46.64 2 0.16268627489066964 0.0007870916961826052 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 124978 15078 VLNEYFHNV True PC9_epitope_Rep4 1133.5505587610498 1133.54946993586 65.929 2 0.16268386434413426 0.0007870916961826052 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 26846 11783 FLEQVHQLY True H1975_Epitope_Rep3 1175.59750895347 1175.59640993586 50.468 2 0.1626822839880879 0.0007870916961826052 0.9438714419765777 ['STAT1|p.D627Tfs*31|1|0.13|ENSG00000115415|chr2:190976999-190977020|AGGGTTCAACCGCATGGAAGTC/-|frameshift_variant', 'nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 139674 21357 YTTDFIYQL True PC9_epitope_Rep4 1162.55464108198 1162.55354993586 90.317 2 0.1626620949647833 0.0007870916961826052 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 103316 15455 SQVDRLVAL True PC9_epitope_Rep2 999.5712942056298 999.57018993586 64.726 2 0.16265694743229886 0.0007870916961826052 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 97558 10654 SGVHTFPAVLQ True NCI_RA007_Epitope_Rep5 1154.6084079903399 1154.60730993586 47.617 2 0.16265177572364042 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3', 'CON__ENSEMBL:ENSBTAP00000024466', 'CON__ENSEMBL:ENSBTAP00000024462'] 140647 19379 YYPEHFTLL True PC9_epitope_Rep4 1181.57571087973 1181.57460993586 82.651 2 0.16265020411066006 0.0007870916961826052 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10'] 67217 11534 LTDLEPATEY True H1975_Epitope_Rep2 1150.5393849406598 1150.5382899358601 49.425 2 0.16264171648411896 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 46890 19864 IVIGVLHQL True PC9_epitope_Rep3 990.6226015025 990.62150993586 81.643 2 0.16264065111932066 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000108788|Q9UH92-2|MLX', 'ENSG00000108788|ENST00000435881|MLX', 'nc|ENSG00000108788|Q9UH92|MLX', 'ENST00000585403.5_1_17:40721871-40723618:+|nuORF'] 72075 16591 MRDITPNLL True PC9_epitope_Rep4 1071.57466533391 1071.5735699358602 71.793 2 0.16263767925469483 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 117187 13404 TYTDVTPRQF True PC9_epitope_Rep3 1226.59315184902 1226.5920499358601 56.591 2 0.16263618392046417 0.0007870916961826052 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 14749 17112 DVVLTQTPLSL True NCI_RA007_Epitope_Rep4 1184.6652541601197 1184.66414993586 74.137 2 0.1626354570920865 0.0007870916961826052 0.9438714419765777 ['CON__Q05B55'] 114226 9875 TRVSQINTL True PC9_epitope_Rep5 1030.5771078620598 1030.5760099358602 42.954 2 0.1626219672886396 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 90347 15050 RIIDVVYNA True PC9_epitope_Rep4 1061.58694426977 1061.58584993586 65.822 2 0.16262037238258736 0.0007870916961826052 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 70297 20970 LYPEGLAQL True PC9_epitope_Rep3 1002.5385970950199 1002.53807496793 85.941 1 0.1626180276127171 0.0007870916961826052 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 102861 16012 SQHGVIIQL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 66.402 2 0.1626176954140035 0.0007870916961826052 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 43884 14429 ILDEVIM[Oxidation]GY True H1975_Epitope_Rep3 1067.5208988059899 1067.5198099358602 60.856 2 0.16261500742241689 0.0007870916961826052 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 40799 21346 HVIDLDDATFL True PC9_epitope_Rep3 1257.62411762413 1257.6230299358601 87.404 2 0.16261352083571456 0.0007870916961826052 0.9438714419765777 ['ENSG00000152219|ENST00000282032|ARL14EP'] 105599 8571 SVEGQLEFR True H1975_Epitope_Rep3 1063.52982331647 1063.5287299358602 37.959 2 0.16261211694106376 0.0007870916961826052 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 53793 13920 KYFLKPEVL True PC9_epitope_Rep4 1135.6641319613097 1135.66249490379 61.445 3 0.16260646489798922 0.0007870916961826052 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 60954 12405 LLAELEQLK True NCI_RA007_Epitope_Rep1 1055.6226610721499 1055.6215699358602 52.227 2 0.16260371298101273 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 38571 19458 HHFLELVTL True PC9_epitope_Rep4 1107.60767971435 1107.60658993586 82.96 2 0.16259414515418708 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 77596 19658 NYTDIKDYL True PC9_epitope_Rep2 1143.54480467427 1143.54370993586 80.999 2 0.16259205882446187 0.0007870916961826052 0.9438714419765777 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 94973 19408 RYPTSIASLAF True PC9_epitope_Rep4 1224.65027280232 1224.64916993586 82.763 2 0.1625896967807523 0.0007870916961826052 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 52210 18496 KMMDVTVTI True PC9_epitope_Rep1 1036.5296892874399 1036.52858993586 75.936 2 0.1625883835112948 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2'] 48950 6637 KEYGQIESV True NCI_RA007_Epitope_Rep4 1051.51858992643 1051.51748993586 32.154 2 0.1625859340806479 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000188739|P42696-2|RBM34', 'ENST00000476261.5_1_1:235316002-235324541:-|nuORF', 'ENSG00000188739|ENST00000408888|RBM34'] 83167 8031 PYTKVEESF True NCI_RA007_Epitope_Rep4 1098.5233409536997 1098.5222499358601 37.657 2 0.16258478318096098 0.0007870916961826052 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 116741 9548 TYLEKAIKI True NCI_RA007_Epitope_Rep1 1077.6433965167298 1077.6422899358602 41.137 2 0.16258410879450266 0.0007870916961826052 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 87039 5909 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 27.715 2 0.16258313338499575 0.0007870916961826052 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 109917 14765 THQTIVVQL True PC9_epitope_Rep1 1037.58694426977 1037.58584993586 61.612 2 0.16257860956329753 0.0007870916961826052 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 132192 20372 VYKAFVMETF True PC9_epitope_Rep1 1233.6103821362897 1233.60928993586 83.185 2 0.16257461451461652 0.0007870916961826052 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 28875 9626 FTDVDVDSIK True NCI_RA007_Epitope_Rep2 1137.5553693579698 1137.55426993586 42.057 2 0.16257059437881463 0.0007870916961826052 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'ENST00000492816.6_1_2:216245477-216245942:-|nuORF', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion'] 6811 17684 AQGGVLPNI True PC9_epitope_Rep4 867.48141657207 867.48030993586 76.045 2 0.16256649947479315 0.0007870916961826052 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC8|p.A114T|1|0.22|ENSG00000277075|chr6:26217314-26217314|G/A|missense_variant', 'H2AC4|p.Q113K|1|0.39|ENSG00000278463|chr6:26033232-26033232|G/T|missense_variant', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 126768 5725 VPSLQGEKA True PC9_epitope_Rep2 927.5025459394699 927.50144993586 27.41 2 0.1625544788887613 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 95992 11779 SEAFATVVTA True H1975_Epitope_Rep2 994.4971262058599 994.49602993586 50.382 2 0.16255446291884892 0.0007870916961826052 0.9438714419765777 ['ZNF292-ORC3|2|fusion', 'ZNF292-ORC3|1|fusion', 'nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 39479 20254 HPAAFPLPVV True PC9_epitope_Rep1 1046.59130137422 1046.59020993586 82.736 2 0.1625521273758248 0.0007870916961826052 0.9438714419765777 ['ENSG00000108523|ENST00000262482|RNF167'] 86959 9478 QRVDSPVTV True PC9_epitope_Rep5 999.5349086969098 999.53380993586 41.413 2 0.16254245538105574 0.0007870916961826052 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 1945 12059 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47456993586 51.467 2 0.16254185118734793 0.0007870916961826052 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 75468 16698 NQIKEFIYA True PC9_epitope_Rep1 1124.5866099165999 1124.58550993586 69.057 2 0.16254070473088508 0.0007870916961826052 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 47327 14198 IYGYVAEQF True NCI_RA007_Epitope_Rep5 1088.5178616504397 1088.51676993586 61.304 2 0.1625389092341858 0.0007870916961826052 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 98840 5905 SITTVQIQK True NCI_RA007_Epitope_Rep3 1016.5866099166 1016.58550993586 30.203 2 0.16252964724414415 0.0007870916961826052 0.9438714419765777 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 26539 8275 FIVGADNVGSK True NCI_RA007_Epitope_Rep1 1105.57677350889 1105.57566993586 36.188 2 0.1625291146314467 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 25250 12320 FEDENFILK True NCI_RA007_Epitope_Rep1 1153.5655401188499 1153.56444993586 51.893 2 0.16252892871889635 0.0007870916961826052 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 53274 19636 KTIEDTLMTV True PC9_epitope_Rep1 1149.59512599497 1149.5940299358601 80.354 2 0.16252887738179367 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 2016 7633 AELATRALP True H1975_Epitope_Rep2 940.5341804209199 940.53308993586 34.312 2 0.1625246521846173 0.0007870916961826052 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 105806 14010 SVINEINKI True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 65.743 2 0.1625243913682131 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 113197 8948 TQDPTVTRL True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 39.261 2 0.16251638233941235 0.0007870916961826052 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 742 10202 AAVPRAAFL True H1975_Epitope_Rep3 914.5337864980999 914.53268993586 44.287 2 0.16251610409901698 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 94276 20144 RWSPVRPLVF True PC9_epitope_Rep1 1255.71896149883 1255.71786993586 82.313 2 0.16250584449129774 0.0007870916961826052 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 40704 7744 HTQGPVDGSLY True H1975_Epitope_Rep2 1172.5462016565998 1172.5451099358602 34.741 2 0.16250481892784577 0.0007870916961826052 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 25889 16016 FGIDRPAEL True PC9_epitope_Rep2 1016.5290950404799 1016.52798993586 66.86 2 0.1625037365763755 0.0007870916961826052 0.9438714419765777 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 24490 16255 FAIPLIEKL True NCI_RA007_Epitope_Rep3 1042.64266824074 1042.6415699358602 71.626 2 0.16250330006517763 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 31873 5475 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 26.081 2 0.16249962879557672 0.0007870916961826052 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 86015 14973 QPITPGPSI True PC9_epitope_Rep3 908.4967322830399 908.49562993586 62.724 2 0.16249882891390507 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 29667 11099 FVNDIFER True H1975_Epitope_Rep3 1038.5134449763398 1038.5123499358601 47.785 2 0.16249829443656055 0.0007870916961826052 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 21180 4858 EREPSSSSL True PC9_epitope_Rep5 990.4618033263 990.46070993586 23.727 2 0.16249035108699836 0.0007870916961826052 0.9438714419765777 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'RALGAPA1|p.C1295Lfs*2|1|0.4|ENSG00000174373|chr14:35655901-35655902|-/A|frameshift_variant', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1', 'ENST00000554652.5_1_14:36147090-36221314:-|nuORF', 'ENST00000557104.1_1_14:36217742-36219705:-|nuORF', 'ENST00000554704.5_1_14:36176787-36221314:-|nuORF', 'ENST00000443361.1_1_9:108283251-108284913:+|nuORF'] 72345 18254 M[Oxidation]TDPIRILV True PC9_epitope_Rep4 1072.5950668057599 1072.59396993586 78.286 2 0.16248554103182983 0.0007870916961826052 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78112818-78113115:-|nuORF'] 103521 12983 SRDDNM[Oxidation]FQI True PC9_epitope_Rep3 1140.48697290876 1140.4858699358601 54.966 2 0.16248478634749178 0.0007870916961826052 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 2180 11637 AEMSTPLSV True H1975_Epitope_Rep3 933.44773348529 933.4471849679301 49.897 1 0.16248256139671718 0.0007870916961826052 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1'] 89387 8065 REMGQFYEA True H1975_Epitope_Rep3 1129.4862442523297 1129.4851499358601 35.996 2 0.16248012431396985 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.T809Rfs*37|1|0.17|ENSG00000106608|chr7:43877038-43877038|T/-|frameshift_variant'] 28160 19164 FRMDIEQSL True PC9_epitope_Rep2 1137.54884450889 1137.54774993586 79.087 2 0.16247922241320334 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 9131 7724 AVLSSPLSH True NCI_RA007_Epitope_Rep3 909.49198125577 909.49088993586 37.505 2 0.16247681984463253 0.0007870916961826052 0.9438714419765777 ['ENSG00000110799|ENST00000261405|VWF'] 108701 13697 TEMDPVIIA True H1975_Epitope_Rep2 987.4946836777099 987.4941349679301 57.829 1 0.16247235351621822 0.0007870916961826052 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 29423 22043 FVFPGELLL True PC9_epitope_Rep6 1033.5848190114498 1033.5837299358602 97.721 2 0.16246967669167253 0.0007870916961826052 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 29185 11589 FVAESHIIL True H1975_Epitope_Rep1 1027.57023157647 1027.56912993586 49.564 2 0.16246707914931977 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 112138 15567 TLVEAIKQV True PC9_epitope_Rep5 999.5964463243098 999.59534993586 64.888 2 0.1624567153424065 0.0007870916961826052 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'MOV10|p.V542A|1|0.11|ENSG00000155363|chr1:112695420-112695420|T/C|missense_variant', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 87370 12729 QTDIQGALSAY True H1975_Epitope_Rep3 1165.5615173675699 1165.5604299358602 54.173 2 0.16245302845310688 0.0007870916961826052 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 40473 6530 HSDTDALGY True H1975_Epitope_Rep3 977.4090394774498 977.40794993586 30.084 2 0.1624521276933667 0.0007870916961826052 0.9438714419765777 ['ENSG00000163898|ENST00000296252|LIPH'] 33929 21246 GMPDFLEKL True PC9_epitope_Rep3 1048.52631815916 1048.5252299358601 87.016 2 0.1624493176574327 0.0007870916961826052 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7'] 96405 9386 SEIDMNDIKA True NCI_RA007_Epitope_Rep5 1134.5226893307001 1134.5215899358602 42.743 2 0.16244720964210047 0.0007870916961826052 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 17371 16497 EHEDVIQIV True PC9_epitope_Rep5 1080.54513902744 1080.5440499358601 68.454 2 0.16244089270721612 0.0007870916961826052 0.9438714419765777 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF', 'ENST00000497744.1_1_17:18007908-18010551:+|nuORF'] 126296 11022 VPIESIERA True PC9_epitope_Rep1 1012.5553097883198 1012.55420993586 47.284 2 0.16243910243200335 0.0007870916961826052 0.9438714419765777 ['ENSG00000167136|ENST00000372642|ENDOG'] 40090 10056 HRDERVLSL True PC9_epitope_Rep3 1123.60980497267 1123.60816490379 43.636 3 0.16243597731283127 0.0007870916961826052 0.9438714419765777 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 10108 20404 AYVVKVFSL True PC9_epitope_Rep3 1024.59571804832 1024.5946299358602 83.737 2 0.162427637751999 0.0007870916961826052 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'ENST00000598805.2_1_19:6686670-6693093:-|nuORF'] 40359 2605 HRTELETKL True PC9_epitope_Rep2 1125.61422164677 1125.61258490379 14.686 3 0.1624246245233316 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 138759 13599 YSDAFLNDSY True H1975_Epitope_Rep2 1193.48768372097 1193.4865899358601 57.445 2 0.16241944837272698 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 40347 8215 HRTDSEIAL True PC9_epitope_Rep3 1040.5250722892 1040.5239699358601 36.578 2 0.1624190610781375 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 113551 18658 TQWDFPVEL True NCI_RA007_Epitope_Rep3 1133.53932537101 1133.53822993586 81.626 2 0.1624089026074525 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'ENST00000504526.1_1_4:184580477-184587420:+|nuORF'] 86701 8388 QRIDSDDAL True PC9_epitope_Rep1 1031.4883524273098 1031.48724993586 37.101 2 0.16240620873207914 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 40476 13262 HSDTIQWLY True H1975_Epitope_Rep3 1161.54547338061 1161.54436993586 56.27 2 0.16239958285932793 0.0007870916961826052 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 48521 11478 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 52.266 2 0.16239928507075738 0.0007870916961826052 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 97050 6130 SEYIHAQVA True H1975_Epitope_Rep2 1016.4927095317598 1016.49160993586 28.556 2 0.16239631121720202 0.0007870916961826052 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 8259 7904 ATINNPNLLTK True NCI_RA007_Epitope_Rep4 1197.67173652289 1197.67062993586 37.139 2 0.1623894531245144 0.0007870916961826052 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 128676 7501 VSMDYAISK True NCI_RA007_Epitope_Rep3 1012.4899326504399 1012.4888299358599 36.627 2 0.16238479843549683 0.0007870916961826052 0.9438714419765777 ['ENSG00000196453|ENST00000247930|ZNF777'] 17517 11787 EHINEGETAML True PC9_epitope_Rep2 1242.55505208814 1242.5539499358601 50.671 2 0.16238241000104833 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 138069 5272 YQDTHPERL True PC9_epitope_Rep5 1157.5465360097699 1157.54488490379 25.295 3 0.16238006494367366 0.0007870916961826052 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 87662 7181 QVASTLKQV True PC9_epitope_Rep5 972.5603951687598 972.55928993586 32.587 2 0.16237421442848968 0.0007870916961826052 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 24738 17834 FAYDGKDYL True PC9_epitope_Rep1 1090.4971262058598 1090.49657496793 73.393 1 0.1623732431700827 0.0007870916961826052 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 139310 8655 YTDMESEDY True H1975_Epitope_Rep3 1151.39648575807 1151.39538993586 38.287 2 0.16236825771951577 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 45220 17181 IRKPYIWEY True PC9_epitope_Rep5 1266.67609362734 1266.6744449037901 71.108 3 0.16236724074175773 0.0007870916961826052 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 48896 8828 KEVDLIPKV True NCI_RA007_Epitope_Rep3 1039.62774645259 1039.62664993586 41.815 2 0.1623666087133175 0.0007870916961826052 0.9438714419765777 ['FAM21A-LURAP1L|1|fusion', 'nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A', 'ENST00000492914.1_1_10:51829372-51845265:+|nuORF', 'FAM21C-LURAP1L|1|fusion', 'FAM21C-LURAP1L|2|fusion', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C'] 25878 8016 FGHYQQAEL True NCI_RA007_Epitope_Rep4 1091.50360856863 1091.5025099358602 37.6 2 0.16236580939865486 0.0007870916961826052 0.9438714419765777 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000535641.5_1_12:121766117-121773388:-|nuORF', 'ENST00000535472.5_1_12:121764442-121775147:-|nuORF', 'ENST00000545218.5_1_12:121756099-121775126:-|nuORF'] 123386 7575 VIDDTNITR True PC9_epitope_Rep1 1045.5403880001702 1045.53928993586 33.955 2 0.16236188102031432 0.0007870916961826052 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 86710 9997 QRIIQQETL True PC9_epitope_Rep2 1127.62987171091 1127.6287699358602 43.781 2 0.1623593492888539 0.0007870916961826052 0.9438714419765777 ['ENSG00000180182|ENST00000324817|MED14'] 96505 4777 SELEMAKA True NCI_RA007_Epitope_Rep3 877.4215187374499 877.4204299358599 25.752 2 0.1623532101018956 0.0007870916961826052 0.9438714419765777 ['ENSG00000267796|ENST00000301159|LIN37'] 116765 16943 TYLEKFQNL True PC9_epitope_Rep4 1154.5971746002997 1154.5960699358602 73.162 2 0.16235018558902306 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 103622 15788 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.59957490379 65.72 3 0.16234814732630534 0.0007870916961826052 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 53895 13098 KYIEGVSDF True PC9_epitope_Rep6 1056.51277627 1056.51166993586 61.995 2 0.16234502183385277 0.0007870916961826052 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 25597 10383 FETAVAPNV True H1975_Epitope_Rep1 946.4759968384599 946.47488993586 44.887 2 0.16232847590338367 0.0007870916961826052 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 9876 23400 AYMQEPLFVEF True PC9_epitope_Rep1 1372.6373251601196 1372.63622993586 94.792 2 0.16232348221645673 0.0007870916961826052 0.9438714419765777 ['ENSG00000273611|ENST00000617429|ZNHIT3'] 92131 11226 RQADFVQVL True NCI_RA007_Epitope_Rep5 1074.5821932425 1074.58108993586 49.818 2 0.16231904993501364 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 113576 19951 TRADLIFTV True PC9_epitope_Rep3 1034.5760452328998 1034.57494993586 81.985 2 0.16231561535762054 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 29874 12793 FVYDEPGHAV True PC9_epitope_Rep3 1132.5189242795998 1132.5178299358602 54.229 2 0.16231461095365532 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 105520 12904 SVDGVIKEV True PC9_epitope_Rep3 944.51786165044 944.51676993586 54.655 2 0.16228341802740007 0.0007870916961826052 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 113589 9076 TRAGPGTLSV True PC9_epitope_Rep1 957.52434401321 957.52324993586 39.762 2 0.162274788220727 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 60302 6798 LIEVDDER True NCI_RA007_Epitope_Rep1 987.4872897981498 987.48618993586 30.45 2 0.1622736103456713 0.0007870916961826052 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6'] 94966 15282 RYPTSIASL True PC9_epitope_Rep5 1006.5447451046199 1006.54364993586 63.791 2 0.16226969987159254 0.0007870916961826052 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 61823 18296 LLLAAARLAAA True PC9_epitope_Rep2 1052.67061432408 1052.66950993586 75.699 2 0.16225924628361468 0.0007870916961826052 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 90895 13741 RLDAVTLLY True H1975_Epitope_Rep1 1062.60734536118 1062.6062499358602 57.994 2 0.16225887984270992 0.0007870916961826052 0.9438714419765777 ['ENSG00000100036|ENST00000343605|SLC35E4'] 107375 19622 SYSMIVNNL True PC9_epitope_Rep4 1039.50083168731 1039.4997299358602 83.593 2 0.16225695755070488 0.0007870916961826052 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 115468 15560 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep4 1178.5641606002998 1178.56306993586 67.773 2 0.1622563742513753 0.0007870916961826052 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 127636 9585 VRDQTELRL True PC9_epitope_Rep3 1128.62512068364 1128.6234749037899 41.82 3 0.16225500261424922 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1', 'IRAK1|p.P308Hfs*45|1|0.26|ENSG00000184216|chrX:154017054-154017054|G/-|frameshift_variant'] 139347 8689 YTDSYTDTY True H1975_Epitope_Rep1 1127.42950013851 1127.42897496793 38.353 1 0.16224828482676346 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 94674 7965 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.61488490379 37.326 3 0.16224807385787132 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 53638 18464 KWNPTAGVAF True PC9_epitope_Rep1 1089.56072952193 1089.5596299358601 75.813 2 0.16224200810695938 0.0007870916961826052 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 72096 15905 MRDPIRILV True PC9_epitope_Rep4 1111.65358436095 1111.65248993586 69.106 2 0.1622355902881121 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 96214 7896 SEELTVTNA True H1975_Epitope_Rep2 962.4556553167 962.45454993586 35.318 2 0.16223550637707118 0.0007870916961826052 0.9438714419765777 ['ENSG00000237649|ENST00000428849|KIFC1'] 61504 20002 LLFSASARF True PC9_epitope_Rep3 1010.5549158654999 1010.55380993586 82.183 2 0.16223314221442361 0.0007870916961826052 0.9438714419765777 ['ENST00000393067.7_1_11:111224109-111224400:-|nuORF'] 4044 20386 AHMDIFQNL True PC9_epitope_Rep1 1087.5120650773501 1087.5109699358602 83.238 2 0.16222393378776423 0.0007870916961826052 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1'] 105725 9289 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 45.893 2 0.162221658338433 0.0007870916961826052 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 96867 4780 SESSDVLPK True NCI_RA007_Epitope_Rep5 960.47639076128 960.47528993586 25.069 2 0.16222072325157286 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 12031 8636 DIDIHEVR True PC9_epitope_Rep3 995.5036085686299 995.50250993586 38.17 2 0.16221966594227327 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 77392 18886 NYLSIFRKF True PC9_epitope_Rep4 1186.6498788795 1186.6487899358601 80.731 2 0.16221905315778518 0.0007870916961826052 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 108495 6438 TEFEDIKSG True NCI_RA007_Epitope_Rep4 1024.4713053808398 1024.47020993586 31.364 2 0.16221280205319596 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF', 'ENST00000514799.1_1_5:59755891-59756539:-|nuORF'] 2175 6264 AEMPQNYRP True NCI_RA007_Epitope_Rep3 1104.5022286696399 1104.50112993586 31.641 2 0.16221079771529018 0.0007870916961826052 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 104730 9474 STDKAEYTFY True H1975_Epitope_Rep2 1223.53463391339 1223.53352993586 41.41 2 0.16220808810591114 0.0007870916961826052 0.9438714419765777 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 72715 21911 MYPYIFHVL True PC9_epitope_Rep5 1181.59433814933 1181.59324993586 89.32 2 0.16220480124411044 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 125669 16827 VMSATFAKF True PC9_epitope_Rep1 1000.5051887917599 1000.50408993586 69.549 2 0.16220205696231837 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 136430 13621 YHGAEIVSL True PC9_epitope_Rep4 987.50254593947 987.50144993586 60.287 2 0.16220199165730623 0.0007870916961826052 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 21079 10235 ERDPATYNI True PC9_epitope_Rep1 1077.5090878718902 1077.50798993586 44.25 2 0.1621987154075946 0.0007870916961826052 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 91820 7217 RPNDIM[Oxidation]AEV True PC9_epitope_Rep4 1059.50189469691 1059.5007899358602 35.065 2 0.16219382932448737 0.0007870916961826052 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 35531 7998 GTIFGIYRK True NCI_RA007_Epitope_Rep3 1053.5971150306498 1053.5960099358601 38.556 2 0.16219220093780765 0.0007870916961826052 0.9438714419765777 ['ENSG00000165140|ENST00000375326|FBP1'] 76627 8979 NTIDPSHPM True PC9_epitope_Rep1 1010.4491304676201 1010.44802993586 39.383 2 0.16218934753000236 0.0007870916961826052 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 57369 8081 LEHGIVPVT True H1975_Epitope_Rep1 963.5389314481899 963.53782993586 36.027 2 0.16218762645544296 0.0007870916961826052 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 73849 12755 NHFMDNTTL True PC9_epitope_Rep2 1091.47059418819 1091.46948993586 54.367 2 0.1621861013451897 0.0007870916961826052 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 1021 11388 AEAESMYQI True H1975_Epitope_Rep2 1040.44846176128 1040.44736993586 48.853 2 0.1621857944131422 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 87728 7788 QVEPGALRY True H1975_Epitope_Rep2 1031.5399940773498 1031.5388899358602 34.903 2 0.16218400261784707 0.0007870916961826052 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 75917 9854 NRDTQETLL True PC9_epitope_Rep1 1088.5462016566 1088.5451099358602 42.763 2 0.1621836783127047 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197905|Q15561-2|TEAD4', 'nc|ENSG00000187079|P28347-2|TEAD1', 'nc|ENSG00000197905|Q15561-3|TEAD4', 'ENSG00000187079|ENST00000527636|TEAD1', 'ENSG00000197905|ENST00000359864|TEAD4'] 75430 13540 NQGEFKELV True PC9_epitope_Rep5 1062.53457434374 1062.53346993586 57.104 2 0.16218030767024091 0.0007870916961826052 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 75048 7685 NMEADPGQY True H1975_Epitope_Rep3 1023.3967605415899 1023.39617496793 34.544 1 0.1621790283804925 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 84535 10014 QHADPPVQI True PC9_epitope_Rep5 1003.50869394907 1003.50758993586 43.496 2 0.16217836980884265 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 5309 10088 ALSGHLETV True PC9_epitope_Rep1 925.48689587533 925.48578993586 43.675 2 0.16217747804483848 0.0007870916961826052 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 47725 12738 IYQKAFDLI True NCI_RA007_Epitope_Rep3 1109.6120963884498 1109.61098993586 57.338 2 0.162175789156442 0.0007870916961826052 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 26069 8889 FHDSAVTSV True PC9_epitope_Rep1 961.45051036661 961.44940993586 39.031 2 0.1621753098880633 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 40444 7571 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.4134299358602 34.074 2 0.16216872285925887 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 54267 16063 KYPLNLYLL True NCI_RA007_Epitope_Rep4 1135.66413196131 1135.66302993586 69.674 2 0.16216502082249604 0.0007870916961826052 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 131848 17877 VYAVIPAEKF True PC9_epitope_Rep2 1135.62774645259 1135.62664993586 74.065 2 0.16216466792788153 0.0007870916961826052 0.9438714419765777 ['ENST00000474020.5_1_1:47118240-47133739:-|nuORF', 'nc|ENSG00000123472|Q5TC12-2|ATPAF1', 'nc|ENSG00000123472|Q5TC12-3|ATPAF1', 'ENSG00000123472|ENST00000574428|ATPAF1'] 114132 6311 TRSITNTTV True PC9_epitope_Rep3 991.52982331647 991.52872993586 29.305 2 0.16216434238477498 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 129362 12171 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.52277496793 51.834 1 0.16215322544870275 0.0007870916961826052 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 88510 9403 RADDTFEAL True NCI_RA007_Epitope_Rep3 1036.48253877088 1036.4814499358602 44.074 2 0.1621521000393047 0.0007870916961826052 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 89457 5392 REQEITAVQA True H1975_Epitope_Rep1 1143.58840082175 1143.58730993586 25.797 2 0.1621508612977142 0.0007870916961826052 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 14814 16837 DYAYLREHF True PC9_epitope_Rep5 1212.5563724174797 1212.55471490379 69.772 3 0.1621434587967631 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 70220 21692 LYLPSFFTY True PC9_epitope_Rep6 1149.57464825057 1149.57354993586 96.325 2 0.1621410025935149 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 18398 19281 EKDPSYFVF True PC9_epitope_Rep4 1130.5284263341398 1130.52732993586 82.269 2 0.1621406977429209 0.0007870916961826052 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 68824 7827 LVDTAGQDEY True H1975_Epitope_Rep1 1109.48768372097 1109.4865899358601 35.057 2 0.16213772422372355 0.0007870916961826052 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 135086 19534 YALPHAILRL True PC9_epitope_Rep5 1165.69716342509 1165.69552490379 80.189 3 0.16213180658605497 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 123417 11714 VIDSAELQAY True H1975_Epitope_Rep2 1107.54480467427 1107.54370993586 50.133 2 0.16213158194394073 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 95002 13278 RYQDIIHSI True PC9_epitope_Rep4 1143.6036569630699 1143.6020249037902 58.97 3 0.16212994511990844 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 94794 11616 RYLQTLTTI True NCI_RA007_Epitope_Rep4 1107.62880908175 1107.6277099358601 51.634 2 0.1621290046627684 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 75885 16195 NRDPILVSL True PC9_epitope_Rep6 1025.58694426977 1025.58584993586 74.648 2 0.1621285436867474 0.0007870916961826052 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 126718 7697 VPRQPTVTSV True PC9_epitope_Rep4 1082.60840799034 1082.60730993586 36.991 2 0.16212365936848297 0.0007870916961826052 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5'] 13121 10323 DLSLEEIQK True H1975_Epitope_Rep1 1073.5604547384098 1073.5593499358602 44.654 2 0.16211324555598292 0.0007870916961826052 0.9438714419765777 ['ENSG00000104435|ENST00000220876|STMN2', 'nc|ENSG00000104435|Q93045-2|STMN2', 'ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 127057 18264 VPYPPLLRA True PC9_epitope_Rep3 1024.6069514383598 1024.60584993586 75.461 2 0.1621105712194253 0.0007870916961826052 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 54011 15289 KYLGQLHYL True PC9_epitope_Rep5 1133.62332977849 1133.62168490379 63.818 3 0.1621092818156487 0.0007870916961826052 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 1512 10611 AEEPVFAAA True H1975_Epitope_Rep2 903.4337976733099 903.43324496793 45.838 1 0.16210920599025705 0.0007870916961826052 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 94277 19339 RWSPVRPLVF True PC9_epitope_Rep2 1255.71896149883 1255.71786993586 79.761 2 0.16210757543077542 0.0007870916961826052 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 109774 13620 THISDTSVVL True PC9_epitope_Rep5 1070.56078909158 1070.5596899358602 57.412 2 0.16210397576944097 0.0007870916961826052 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 124651 20528 VLIGEFLEKV True PC9_epitope_Rep4 1145.66961126457 1145.6685099358601 87.112 2 0.1621026991378689 0.0007870916961826052 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 18882 12360 ELEKSVYWDY True H1975_Epitope_Rep2 1330.60813320682 1330.60702993586 52.628 2 0.16210149146495167 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'ENSG00000141258|ENST00000268989|SGSM2'] 47388 12533 IYIGGQEHF True PC9_epitope_Rep6 1062.5134449763398 1062.5123499358601 59.643 2 0.1621005577447935 0.0007870916961826052 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 83891 15674 QEIFEVNNLP True H1975_Epitope_Rep2 1201.59790287629 1201.5968099358602 65.449 2 0.16209998333968412 0.0007870916961826052 0.9438714419765777 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000554892.1_1_14:24028960-24029314:-|nuORF', 'ENST00000557391.1_1_14:24028960-24029655:-|nuORF'] 6647 10169 AQAAALYKV True PC9_epitope_Rep5 933.5283667644899 933.52726993586 44.102 2 0.1620992881986042 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'ENST00000483659.5_1_2:85622736-85628768:-|nuORF'] 47654 10849 IYPPKLHQF True PC9_epitope_Rep4 1141.62841515893 1141.62676490379 49.49 3 0.1620819591108349 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 109036 10111 TEYGIGVSA True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 43.933 1 0.16207980797957952 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 21300 6547 ERIQHAVQL True PC9_epitope_Rep4 1092.60399131624 1092.60288993586 32.316 2 0.16207613997370637 0.0007870916961826052 0.9438714419765777 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 102050 8045 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 36.304 2 0.1620740558162588 0.0007870916961826052 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 21246 9530 ERHPQTIVL True PC9_epitope_Rep5 1091.60874234351 1091.60764993586 41.616 2 0.16206846684951337 0.0007870916961826052 0.9438714419765777 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 47655 10935 IYPPKLHQF True PC9_epitope_Rep4 1141.62841515893 1141.62676490379 49.83 3 0.16206660517242694 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 83860 6734 QEHENIIVA True H1975_Epitope_Rep2 1051.52982331647 1051.5287299358602 30.817 2 0.1620634019651329 0.0007870916961826052 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 123640 19286 VILPKFTAV True PC9_epitope_Rep2 986.6164534929 986.61534993586 79.558 2 0.1620565850261001 0.0007870916961826052 0.9438714419765777 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 136564 17405 YHSFVSSVF True PC9_epitope_Rep6 1071.5025459394699 1071.5014499358601 79.563 2 0.16205501807219025 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 11660 13011 DHDGNIVEL True PC9_epitope_Rep6 1010.46688870674 1010.46578993586 61.628 2 0.16205277060256168 0.0007870916961826052 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 140853 22146 YYTEFPTVL True PC9_epitope_Rep1 1131.54882742555 1131.5477299358602 90.0 2 0.16205082311520025 0.0007870916961826052 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 140574 19030 YYLSKIEEL True PC9_epitope_Rep2 1156.6015912743999 1156.6004899358602 78.563 2 0.16204999701677947 0.0007870916961826052 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5'] 138836 8733 YSDKYGLGY True H1975_Epitope_Rep3 1064.48147614172 1064.48097496793 38.595 1 0.16204804999560457 0.0007870916961826052 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 13901 13285 DRDPTAYAL True PC9_epitope_Rep1 1020.4876241513199 1020.48652993586 55.964 2 0.162047187499685 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 34605 9978 GQHPNIITL True NCI_RA007_Epitope_Rep4 991.5450794577899 991.5439899358599 45.223 2 0.16204574532271332 0.0007870916961826052 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'RPS6KA6|p.R473P|1|0.56|ENSG00000072133|chrX:84105824-84105824|C/G|missense_variant', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 47687 21182 IYPTTYVQF True PC9_epitope_Rep1 1130.56481184286 1130.56370993586 86.311 2 0.1620446144939591 0.0007870916961826052 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 106737 19638 SYDPDFNQL True PC9_epitope_Rep5 1097.46655435357 1097.46544993586 80.592 2 0.16204088388525312 0.0007870916961826052 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 3965 15746 AHEGSIFAL True PC9_epitope_Rep6 943.4763311916299 943.4752299358599 72.795 2 0.16203760127268735 0.0007870916961826052 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 43036 8603 IGGIGTVPVGR True NCI_RA007_Epitope_Rep4 1024.6029286870798 1024.60182993586 39.874 2 0.16203599813028563 0.0007870916961826052 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 129184 10751 VTDFPGFDER True H1975_Epitope_Rep3 1181.5353026197297 1181.5342099358602 46.432 2 0.16203532485411368 0.0007870916961826052 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 39748 18303 HPYLFPVAA True PC9_epitope_Rep2 1013.5334521449298 1013.53234993586 75.73 2 0.16203303737331612 0.0007870916961826052 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 28027 19158 FRADDTFEAL True PC9_epitope_Rep5 1183.55095268387 1183.54984993586 78.728 2 0.1620209715811052 0.0007870916961826052 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 40475 13421 HSDTIQWLY True H1975_Epitope_Rep2 1161.54547338061 1161.54436993586 56.759 2 0.1620188559747204 0.0007870916961826052 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 73262 7230 NEIDTTPPP True H1975_Epitope_Rep3 982.46074069714 982.4596499358599 32.782 2 0.16201676129634332 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 28464 14167 FSEQQLDLY True H1975_Epitope_Rep2 1141.5291546101298 1141.52804993586 59.647 2 0.16201621325918095 0.0007870916961826052 0.9438714419765777 ['ENSG00000213445|ENST00000534313|SIPA1'] 128361 6331 VSDPSSPQY True H1975_Epitope_Rep3 978.42944056886 978.42834993586 29.342 2 0.1620155203902358 0.0007870916961826052 0.9438714419765777 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 89222 8322 REIQEAIAVA True H1975_Epitope_Rep2 1098.6033226098998 1098.6022299358601 36.961 2 0.16201352746337874 0.0007870916961826052 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 19357 6237 ELNITAAK True NCI_RA007_Epitope_Rep2 858.4810822188999 858.47998993586 28.867 2 0.16201348122804546 0.0007870916961826052 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 24017 23945 EYPFILDAF True PC9_epitope_Rep3 1113.5382627418498 1113.5371699358602 97.391 2 0.16200426113777833 0.0007870916961826052 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 14543 14083 DVDLEFLAK True H1975_Epitope_Rep1 1048.54407639828 1048.5429699358601 59.336 2 0.16200107705531316 0.0007870916961826052 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF'] 69660 17710 LVVTNLDKL True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 72.917 2 0.16199974373930345 0.0007870916961826052 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 27244 23019 FLVPTFEQL True PC9_epitope_Rep5 1092.5855472874398 1092.5844499358602 93.535 2 0.16199096314885586 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 41130 11329 HYPLNTVTF True NCI_RA007_Epitope_Rep5 1090.54474510462 1090.54364993586 50.226 2 0.1619902708174237 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 2356 5514 AEQERNEFV True H1975_Epitope_Rep2 1120.5149015283198 1120.51380993586 26.222 2 0.16198637396875243 0.0007870916961826052 0.9438714419765777 ['ENSG00000179933|ENST00000319074|C14orf119'] 52449 10186 KPHAPIISI True PC9_epitope_Rep4 974.5913013742199 974.59020993586 46.858 2 0.16198064434513681 0.0007870916961826052 0.9438714419765777 ['ENSG00000137962|ENST00000260526|ARHGAP29'] 9703 19871 AYILDTLVF True NCI_RA007_Epitope_Rep3 1053.57464825057 1053.57354993586 86.603 2 0.16198059394998 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 3390 19004 [Acetylation]-AGITTIEAVK True PC9_epitope_Rep3 1043.58627587973 1043.5851699358602 78.32 2 0.16197591987304072 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 139203 19599 YSVDRLYEL True PC9_epitope_Rep5 1156.5764391557198 1156.57534993586 80.441 2 0.16197467584373942 0.0007870916961826052 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 114906 6317 TTETETIAKY True H1975_Epitope_Rep2 1155.5659340416698 1155.5648299358602 29.234 2 0.1619719368975945 0.0007870916961826052 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 103621 15950 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.60010993586 66.34 2 0.16197045659817036 0.0007870916961826052 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 23993 14795 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep1 1300.57578791316 1300.57468993586 61.729 2 0.1619702687666508 0.0007870916961826052 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 94698 6157 RYLENGKETL True PC9_epitope_Rep4 1221.6353510141698 1221.6337049037902 30.709 3 0.16196796911268194 0.0007870916961826052 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 46897 17727 IVIRGLNTI True PC9_epitope_Rep1 997.62841515893 997.62730993586 72.984 2 0.16196404029208436 0.0007870916961826052 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 113731 18389 TRDEYLSLVA True PC9_epitope_Rep3 1165.59790287629 1165.5968099358602 75.941 2 0.16196051314301194 0.0007870916961826052 0.9438714419765777 ['MED15|p.V609Cfs*38|1|0.2|ENSG00000099917|chr22:20584875-20584875|G/-|frameshift_variant', 'MED15|p.Q615Afs*53|1|0.11|ENSG00000099917|chr22:20584891-20584892|-/A|frameshift_variant', 'MED15|p.A683Gfs*30|1|0.14|ENSG00000099917|chr22:20585181-20585182|-/G|frameshift_variant', 'ENSG00000099917|ENST00000263205|MED15', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15'] 5166 7319 ALPDQGIAKA True PC9_epitope_Rep6 982.5447451046199 982.54364993586 37.322 2 0.16195859291867312 0.0007870916961826052 0.9438714419765777 ['ENSG00000089289|ENST00000356413|IGBP1'] 132013 16573 VYGPMKNYL True PC9_epitope_Rep5 1083.5423025764699 1083.54120993586 68.752 2 0.16195293681452755 0.0007870916961826052 0.9438714419765777 ['ENSG00000166825|ENST00000300060|ANPEP'] 20897 14052 EQSRIITVL True PC9_epitope_Rep6 1057.6131590176099 1057.61206993586 65.921 2 0.16195195942939825 0.0007870916961826052 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 14081 13348 DSDMQTLVY True H1975_Epitope_Rep3 1070.45902644498 1070.4579299358602 56.605 2 0.16194961458082183 0.0007870916961826052 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 123543 14008 VIIESDLERA True PC9_epitope_Rep5 1143.6135529404298 1143.61244993586 58.9 2 0.1619471787951398 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 86950 15378 QRVDNIEVL True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 63.969 2 0.16194185911742498 0.0007870916961826052 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 116204 20545 TVTSDLLQV True PC9_epitope_Rep1 974.5284263341399 974.5273299358599 83.838 2 0.16194050153506942 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 96226 5073 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 24.595 2 0.16193149952147218 0.0007870916961826052 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 31897 7441 GEQKFSSLP True H1975_Epitope_Rep2 991.4974605590298 991.49636993586 33.567 2 0.1619277195993746 0.0007870916961826052 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT'] 9260 4422 AVQRTLLEK True NCI_RA007_Epitope_Rep4 1056.6291434349198 1056.6280499358602 23.372 2 0.16192201882073856 0.0007870916961826052 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 22130 9903 ESYSIYVYK True H1975_Epitope_Rep3 1150.55464108198 1150.55354993586 43.123 2 0.16191950530452864 0.0007870916961826052 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 21093 5246 ERDPGGITA True PC9_epitope_Rep5 914.4457593393399 914.44466993586 25.196 2 0.16191149263595425 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C', 'ENSG00000099385|ENST00000215115|BCL7C'] 131058 21478 VVLPLELKL True PC9_epitope_Rep5 1022.6739683690199 1022.6728699358599 87.649 2 0.16190931321283844 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 112204 16488 TLVYHVVGV True PC9_epitope_Rep5 985.5596668927699 985.55856993586 68.42 2 0.16190910919401866 0.0007870916961826052 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 87180 19096 QSLEYLEQV True PC9_epitope_Rep4 1107.54480467427 1107.54370993586 81.544 2 0.16190732543261366 0.0007870916961826052 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 120296 10293 VFPEKGYSF True NCI_RA007_Epitope_Rep3 1072.5229470308798 1072.52184993586 47.559 2 0.16189001618044122 0.0007870916961826052 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 4045 19897 AHMDIFQNL True PC9_epitope_Rep2 1087.5120650773501 1087.5109699358602 81.929 2 0.16188515398521455 0.0007870916961826052 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1'] 120251 10948 VFPDKGYSF True NCI_RA007_Epitope_Rep4 1058.5072969667401 1058.5061899358602 48.976 2 0.16188416577895695 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 102040 6292 SPPPPPPPP True NCI_RA007_Epitope_Rep4 881.4647038787699 881.46360993586 30.807 2 0.16187916204997224 0.0007870916961826052 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 70102 15593 LYITEPKTI True PC9_epitope_Rep5 1076.61176203528 1076.6106699358602 64.987 2 0.16187897664397802 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 87864 19693 QVLEDFPTI True PC9_epitope_Rep6 1060.54407639828 1060.54357496793 88.406 1 0.16187729886223717 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 2019 7546 AELATRALP True H1975_Epitope_Rep3 940.5341804209199 940.53308993586 34.007 2 0.16187283813034326 0.0007870916961826052 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 63751 12202 LPRPQGITV True PC9_epitope_Rep4 979.5814649665099 979.58036993586 54.754 2 0.16187216049179728 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 38878 18839 HIIENIVAV True PC9_epitope_Rep3 1006.58113061334 1006.58002993586 77.686 2 0.16186632622223712 0.0007870916961826052 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 69545 4764 LVTEDVM[Oxidation]R True H1975_Epitope_Rep3 977.4851820036099 977.48408993586 23.451 2 0.16186552989927896 0.0007870916961826052 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 105446 15592 SVAQDIPKL True PC9_epitope_Rep5 969.5494961318899 969.54838993586 64.983 2 0.16186193816041716 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 76190 18225 NRTELPLTL True PC9_epitope_Rep5 1055.59750895347 1055.59640993586 75.114 2 0.16186174792283134 0.0007870916961826052 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 113833 11593 TREEGTPLTL True PC9_epitope_Rep2 1115.5822528121498 1115.5811499358601 49.92 2 0.16185096681208214 0.0007870916961826052 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 38364 9141 HGEIDYEAIVK True NCI_RA007_Epitope_Rep2 1272.6350166609998 1272.6339099358602 40.163 2 0.1618509343909268 0.0007870916961826052 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6'] 35527 14102 GTIDEIQKL True PC9_epitope_Rep4 1015.5549754351499 1015.55386993586 62.15 2 0.16184912319201517 0.0007870916961826052 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1'] 40276 11910 HRNGGLITL True PC9_epitope_Rep5 979.55631284783 979.55520993586 50.809 2 0.16184746513351195 0.0007870916961826052 0.9438714419765777 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 35590 15204 GTITQVIKV True PC9_epitope_Rep3 957.58588164061 957.58478993586 63.627 2 0.16183656432329796 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000166747|O43747-2|AP1G1', 'ENSG00000166747|ENST00000299980|AP1G1'] 23727 23396 EYINFLENL True PC9_epitope_Rep5 1153.5655401188499 1153.56444993586 94.973 2 0.16182686008036473 0.0007870916961826052 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 120325 15963 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 66.391 2 0.16182334001207585 0.0007870916961826052 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 132910 17817 VYTTTVHWL True PC9_epitope_Rep4 1118.5760452329 1118.57494993586 76.566 2 0.16181741466105828 0.0007870916961826052 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 114050 14127 TRNDYVMMY True PC9_epitope_Rep4 1191.50526544475 1191.50416993586 62.244 2 0.16181516943661128 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 105339 4317 STVSADPVVK True NCI_RA007_Epitope_Rep3 1001.5393253710099 1001.53822993586 23.721 2 0.16181431146009956 0.0007870916961826052 0.9438714419765777 ['ENSG00000136051|ENST00000332180|WASHC4'] 113791 14399 TRDSLPVSL True PC9_epitope_Rep4 986.53965972418 986.53856993586 63.296 2 0.16181060140501163 0.0007870916961826052 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 3503 12731 AGLQFPVGR True PC9_epitope_Rep6 943.5239500903898 943.52284993586 60.456 2 0.16179829549114927 0.0007870916961826052 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 77269 16071 NYIRITSEI True PC9_epitope_Rep2 1107.59242357303 1107.5913299358601 67.074 2 0.1617975046322643 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 102997 18348 SQISDTSVVL True PC9_epitope_Rep5 1047.5448046742702 1047.54370993586 75.592 2 0.16179717263640966 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 91484 5244 RNVSTGDVNV True NCI_RA007_Epitope_Rep4 1059.53088594563 1059.5297899358602 26.711 2 0.16179645700310397 0.0007870916961826052 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 15199 8129 EAFNM[Oxidation]IDQNR True PC9_epitope_Rep2 1252.5506357944798 1252.5495299358602 36.626 2 0.16179374428311213 0.0007870916961826052 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 76072 16306 NRLTFASTL True PC9_epitope_Rep5 1021.55564414149 1021.55454993586 67.717 2 0.1617905670931099 0.0007870916961826052 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 134350 12489 WSDGHLIYY True H1975_Epitope_Rep2 1152.52400966004 1152.52290993586 53.13 2 0.1617886672893423 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-4|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2'] 73955 19623 NHMAVAFVL True PC9_epitope_Rep2 1000.5164221818 1000.51532993586 80.864 2 0.16177886028915558 0.0007870916961826052 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 102737 21139 SQDYPTLAF True PC9_epitope_Rep5 1040.48147614172 1040.4803699358602 86.37 2 0.16177025303851686 0.0007870916961826052 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 139859 15494 YVDPQFLTY True H1975_Epitope_Rep3 1144.54407639828 1144.54357496793 65.014 1 0.16176454286553515 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 53836 10560 KYGNANVW True PC9_epitope_Rep1 950.46101548066 950.45990993586 45.51 2 0.16176200178154657 0.0007870916961826052 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 64200 20874 LQIDQINTDL True PC9_epitope_Rep1 1171.60846755999 1171.60736993586 85.117 2 0.16175914440569258 0.0007870916961826052 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 115305 17254 TVDPASLWEY True H1975_Epitope_Rep3 1179.54480467427 1179.54427496793 72.012 1 0.16175774033267007 0.0007870916961826052 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 25432 11004 FELFADKVPK True NCI_RA007_Epitope_Rep2 1192.6492101731599 1192.64755490379 47.413 3 0.1617561612579276 0.0007870916961826052 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA'] 1540 6569 AEETPPTSV True H1975_Epitope_Rep2 929.43419159613 929.43364496793 30.178 1 0.161753300733005 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 76106 6343 NRPGTVSSL True PC9_epitope_Rep1 929.49304388493 929.49194993586 29.209 2 0.16174500532307806 0.0007870916961826052 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 138435 20842 YREDLDFVL True PC9_epitope_Rep3 1168.5764391557198 1168.57534993586 85.44 2 0.16174409543318408 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 18797 12006 ELDTPINY True H1975_Epitope_Rep3 963.4549270407099 963.4543749679301 51.342 1 0.16174394150012902 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 52596 16738 KPYNVYITV True PC9_epitope_Rep5 1095.59644632431 1095.5953499358602 69.389 2 0.16173989449237705 0.0007870916961826052 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 131709 22776 VWSDVTPLTF True PC9_epitope_Rep1 1163.58627556343 1163.5851699358602 92.416 2 0.16173944710279597 0.0007870916961826052 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 27754 21524 FQDSVFNDL True PC9_epitope_Rep5 1083.48728979815 1083.48618993586 87.828 2 0.1617341388206789 0.0007870916961826052 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 38100 8898 HENPDIIIA True H1975_Epitope_Rep3 1020.52400966004 1020.52290993586 39.223 2 0.1617292304523157 0.0007870916961826052 0.9438714419765777 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENST00000546869.1_1_12:113614643-113615134:-|nuORF'] 132651 16497 VYQLRFQFL True NCI_RA007_Epitope_Rep5 1212.6655289436396 1212.6644299358602 70.215 2 0.16172715752618455 0.0007870916961826052 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 37605 10051 GYSFTTTAER True PC9_epitope_Rep5 1131.51965255559 1131.5185499358602 43.64 2 0.1617228804564337 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 7964 15255 ATDLDVANFY True H1975_Epitope_Rep1 1127.51350454599 1127.51297496793 63.943 1 0.16171880865493482 0.0007870916961826052 0.9438714419765777 ['ENSG00000142252|ENST00000270257|GEMIN7'] 106543 11053 SVVTGGVQSV True PC9_epitope_Rep4 931.49746055903 931.49636993586 50.291 2 0.16171612445233133 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 71290 16585 MHAETAFESL True PC9_epitope_Rep3 1134.5015599633 1134.50046993586 68.932 2 0.16171598352694758 0.0007870916961826052 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 138571 4792 YRPGTVALR True NCI_RA007_Epitope_Rep5 1031.5876129761098 1031.58650993586 25.118 2 0.16170748386452896 0.0007870916961826052 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'H3C13|p.H40Q|1|0.1|ENSG00000183598|chr1:149813562-149813562|G/C|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 139325 5437 YTDRALRASY True H1975_Epitope_Rep2 1214.6043852390599 1214.6027249037902 25.94 3 0.16170544471377374 0.0007870916961826052 0.9438714419765777 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF', 'ENSG00000100056|ENST00000252137|ESS2', 'ENST00000434568.5_1_22:19121711-19126708:-|nuORF'] 44985 16200 IQIMKVEEI True PC9_epitope_Rep6 1101.61038213629 1101.60928993586 74.666 2 0.16170233606996487 0.0007870916961826052 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 47842 14352 IYSTKLYRF True PC9_epitope_Rep5 1189.6495445263297 1189.64788490379 60.205 3 0.16170231383652228 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENSG00000148925|ENST00000278174|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 54406 8373 KYSLIKGNF True NCI_RA007_Epitope_Rep1 1068.59678067748 1068.59568993586 36.571 2 0.16170057385403858 0.0007870916961826052 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 3901 11513 AHDDSVM[Oxidation]YL True PC9_epitope_Rep5 1065.44371111445 1065.4426099358602 49.281 2 0.161693807697451 0.0007870916961826052 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 17139 4597 EGVKFDESEK True NCI_RA007_Epitope_Rep2 1166.54553295026 1166.54389490379 22.507 3 0.16169109409030666 0.0007870916961826052 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF'] 103519 12101 SRDDNM[Oxidation]FQI True PC9_epitope_Rep2 1140.48697290876 1140.4858699358601 51.856 2 0.1616846327620836 0.0007870916961826052 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 77593 12969 NYTDIKDYL True NCI_RA007_Epitope_Rep3 1143.54480467427 1143.54370993586 58.287 2 0.16168374430127344 0.0007870916961826052 0.9438714419765777 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 103453 15479 SRAGLQFPV True PC9_epitope_Rep2 973.53451477409 973.53340993586 64.817 2 0.16168041213907974 0.0007870916961826052 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC4|p.R30Q|1|0.07|ENSG00000278463|chr6:26033480-26033480|C/T|missense_variant', 'H2AC13|p.R30P|1|0.16|ENSG00000196747|chr6:27808298-27808298|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 40824 20806 HVLDTLIQL True PC9_epitope_Rep2 1050.60734536118 1050.6062499358602 85.472 2 0.16167098990395445 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 53857 11870 KYGRIVEVL True PC9_epitope_Rep4 1075.6389798426299 1075.6378899358601 53.433 2 0.16165389712945863 0.0007870916961826052 0.9438714419765777 ['RBMXL2|p.G376Efs*4|1|0.33|ENSG00000170748|chr11:7090246-7090246|G/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'RBMX|p.M40I|2|0.14|ENSG00000147274|chrX:136879113-136879113|C/T|missense_variant', 'ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'nc|ENSG00000147274|P38159-3|RBMX'] 27671 15840 FQDENHLYL True PC9_epitope_Rep2 1177.54038800017 1177.53928993586 66.187 2 0.16165290477521205 0.0007870916961826052 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 108601 11984 TEILGTQEIA True H1975_Epitope_Rep2 1073.5604547384098 1073.5593499358602 51.177 2 0.16164222474096315 0.0007870916961826052 0.9438714419765777 ['ENST00000526990.1_1_11:65349145-65351290:+|nuORF', 'ENSG00000173442|ENST00000309295|EHBP1L1'] 113513 10453 TQTAVITRI True PC9_epitope_Rep2 1001.5869442697699 1001.58584993586 45.527 2 0.1616360322847937 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 27750 21598 FQDSVFNDL True PC9_epitope_Rep1 1083.48728979815 1083.48618993586 87.9 2 0.16161282519479606 0.0007870916961826052 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 102899 9924 SQIDPSSIERA True PC9_epitope_Rep6 1201.5938801250102 1201.59278993586 48.689 2 0.16161264054766958 0.0007870916961826052 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 5948 11292 APILVPHTA True PC9_epitope_Rep1 917.5334521449299 917.53234993586 48.314 2 0.16160874822656482 0.0007870916961826052 0.9438714419765777 ['ENSG00000223501|ENST00000445902|VPS52', 'nc|ENSG00000223501|Q8N1B4-2|VPS52'] 86696 13237 QRIDEFESM True PC9_epitope_Rep4 1153.5073736197298 1153.50626993586 58.813 2 0.1616067370514153 0.0007870916961826052 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 49528 6138 KKFLKPYTL True NCI_RA007_Epitope_Rep1 1136.69576644276 1136.69413490379 27.912 3 0.1616062240363792 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3', 'ATP1B3|p.L110I|2|0.19|ENSG00000069849|chr3:141907256-141907256|C/A|missense_variant'] 9412 7226 AVVIVDDR True PC9_epitope_Rep4 885.4919812557699 885.49088993586 35.1 2 0.16160451426905914 0.0007870916961826052 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 38868 18651 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 76.529 2 0.16160333843856703 0.0007870916961826052 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 140561 21373 YYLNEIQSF True PC9_epitope_Rep5 1175.5498900547097 1175.5487899358602 87.272 2 0.16159675670596654 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 72826 18126 NALDKVLSV True PC9_epitope_Rep2 957.54949613189 957.54838993586 75.024 2 0.16159570845527763 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8', 'NARS2-ALG8|2|fusion', 'NARS2-ALG8|1|fusion', 'ENST00000524925.1_1_11:77817969-77825348:-|nuORF'] 93445 5895 RSDPGGGGLAY True H1975_Epitope_Rep2 1048.49377216092 1048.49266993586 27.661 2 0.161595574179578 0.0007870916961826052 0.9438714419765777 ['ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF'] 96900 8556 SETEYVIRC True H1975_Epitope_Rep1 1098.5015599633 1098.50046993586 37.837 2 0.16159419227623315 0.0007870916961826052 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 140516 21563 YYITGNLETF True PC9_epitope_Rep1 1219.57610480255 1219.5750099358602 87.764 2 0.16159245278672305 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 53636 11405 KWNPTAGVAF True NCI_RA007_Epitope_Rep3 1089.56072952193 1089.5596299358601 51.986 2 0.16159160406096565 0.0007870916961826052 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 69715 19863 LWAPRPFNL True PC9_epitope_Rep4 1112.61309944796 1112.6120099358602 84.533 2 0.16159080244269897 0.0007870916961826052 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 132687 14367 VYRTVIEYY True PC9_epitope_Rep6 1204.6128246644398 1204.61172993586 67.158 2 0.1615894892816344 0.0007870916961826052 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20'] 9101 11135 AVLDYVMTR True NCI_RA007_Epitope_Rep3 1066.5481162329 1066.5470099358602 50.902 2 0.16158249674334918 0.0007870916961826052 0.9438714419765777 ['ENSG00000139826|ENST00000375898|ABHD13'] 20894 15613 EQSRIITVL True PC9_epitope_Rep2 1057.6131590176099 1057.61206993586 65.333 2 0.16158049339198466 0.0007870916961826052 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 2429 4039 AEQLRM[Oxidation]EET True H1975_Epitope_Rep2 1121.5022886197298 1121.50118993586 20.613 2 0.16157867815372176 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 95560 9343 SASFEPFSNK True NCI_RA007_Epitope_Rep1 1112.5138388991597 1112.51274993586 40.337 2 0.16157808525513317 0.0007870916961826052 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 130742 10893 VVDPNDPQM True PC9_epitope_Rep3 1013.44879611445 1013.44768993586 46.883 2 0.1615779166662112 0.0007870916961826052 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 102945 18026 SQINKFLYL True PC9_epitope_Rep6 1124.62299542532 1124.62188993586 81.964 2 0.16157682183466812 0.0007870916961826052 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 76188 17669 NRTELPLTL True PC9_epitope_Rep2 1055.59750895347 1055.59640993586 73.243 2 0.16157429689935932 0.0007870916961826052 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 62168 14514 LLPHVVPGTT True PC9_epitope_Rep3 1032.59678067748 1032.59568993586 60.949 2 0.16157183734300923 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 73161 8891 NEDLRSWTA True H1975_Epitope_Rep3 1090.50433684462 1090.5032299358602 39.197 2 0.16156956220473506 0.0007870916961826052 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 96049 7636 SEAPKSWM[Oxidation]V True H1975_Epitope_Rep2 1049.4851820036101 1049.48408993586 34.323 2 0.16156799890204201 0.0007870916961826052 0.9438714419765777 ['ENSG00000154760|ENST00000285013|SLFN13'] 10123 18920 AYYPAQGVQQF True PC9_epitope_Rep5 1270.59823722946 1270.5971499358602 77.797 2 0.16155976399725464 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 138806 7054 YSDGYGRVY True H1975_Epitope_Rep3 1078.47197408718 1078.47086993586 32.098 2 0.16155909090663403 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 136112 13930 YGEPSEVFINR True PC9_epitope_Rep4 1309.6302656337298 1309.62916993586 61.485 2 0.16155428002876987 0.0007870916961826052 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 89783 16886 RFEEAHFTF True PC9_epitope_Rep3 1182.5458077337796 1182.54415490379 70.107 3 0.16155078167724848 0.0007870916961826052 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 128309 10332 VSDAVATYY True H1975_Epitope_Rep2 987.4549270407101 987.4543749679301 44.751 1 0.1615459797197815 0.0007870916961826052 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF'] 31339 8446 GEALASISHVA True H1975_Epitope_Rep1 1053.54547338061 1053.54436993586 37.416 2 0.16154438856603276 0.0007870916961826052 0.9438714419765777 ['ENSG00000076242|ENST00000231790|MLH1', 'ENST00000539477.5_1_3:37035370-37053334:+|nuORF', 'ENST00000466900.5_1_3:37035370-37047454:+|nuORF'] 102517 11654 SQADAFFKA True PC9_epitope_Rep6 983.47124581119 983.47014993586 55.954 2 0.16153438516004026 0.0007870916961826052 0.9438714419765777 ['ENSG00000103544|ENST00000417362|VPS35L', 'nc|ENSG00000103544|Q7Z3J2-2|VPS35L'] 44692 18000 IPNPAQTSVVV True PC9_epitope_Rep1 1123.62372370131 1123.62262993586 74.031 2 0.16152494761655092 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 26251 20093 FIAKSFYDL True PC9_epitope_Rep1 1102.5698972233 1102.5688099358601 82.115 2 0.16152063079995074 0.0007870916961826052 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 37773 5549 HAYDGKDYI True NCI_RA007_Epitope_Rep3 1080.48762415132 1080.48652993586 28.822 2 0.16151542638759736 0.0007870916961826052 0.9438714419765777 ['ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'nc|ENSG00000206341|P01893|HLA-H'] 94074 15719 RVVDLLNQA True PC9_epitope_Rep3 1026.5821932425 1026.58108993586 65.621 2 0.16151056985745782 0.0007870916961826052 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 41045 16318 HYILHNSFF True PC9_epitope_Rep4 1176.5716285587998 1176.5705299358601 70.729 2 0.16150904564443005 0.0007870916961826052 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 38743 5497 HHTTQQTFL True PC9_epitope_Rep4 1111.54105670651 1111.53994993586 27.903 2 0.1615061351894293 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 83088 22880 PYNDYFEYF True PC9_epitope_Rep1 1256.50260550912 1256.5015099358602 92.803 2 0.1615045676082139 0.0007870916961826052 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 132608 20500 VYPQYVIEY True PC9_epitope_Rep2 1172.57537652656 1172.5748749679299 84.283 1 0.16149945535388688 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 74518 19333 NKTDVVLIL True PC9_epitope_Rep3 1013.6120963884499 1013.61098993586 79.585 2 0.1614958514151738 0.0007870916961826052 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 139831 5446 YVDGVEVHN True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 27.528 2 0.16149026838738625 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 88507 9938 RADDTFEAL True NCI_RA007_Epitope_Rep2 1036.48253877088 1036.4814499358602 43.284 2 0.1614872660776524 0.0007870916961826052 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 61595 17236 LLGPRLVLA True PC9_epitope_Rep6 950.6276868829399 950.62658993586 78.896 2 0.16148107657215865 0.0007870916961826052 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 105526 10972 SVDPHGFISY True H1975_Epitope_Rep1 1120.5189242796 1120.5178299358602 47.168 2 0.161475546534239 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 23991 9624 EYPDRIM[Oxidation]NTF True NCI_RA007_Epitope_Rep4 1300.57578791316 1300.57468993586 43.868 2 0.16147443599689995 0.0007870916961826052 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 136198 20501 YGLPVVVKL True PC9_epitope_Rep1 986.6164534929 986.61534993586 83.669 2 0.1614650071694772 0.0007870916961826052 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 74549 16450 NLAKCIVSV True PC9_epitope_Rep5 945.5317378927699 945.53064993586 68.273 2 0.1614596643797941 0.0007870916961826052 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1'] 38628 18831 HHIYLEGTLL True PC9_epitope_Rep5 1194.6397081186199 1194.63805490379 77.448 3 0.16145886514428012 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 23665 20730 EYGPVYSTW True PC9_epitope_Rep1 1100.48147614172 1100.4803699358602 84.565 2 0.161458180378413 0.0007870916961826052 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30'] 137129 16076 YLDIGQVYY True H1975_Epitope_Rep2 1132.54407639828 1132.54357496793 67.042 1 0.16145432443314833 0.0007870916961826052 0.9438714419765777 ['ENSG00000006555|ENST00000371276|TTC22'] 71249 6624 M[Oxidation]GESDDSILR True NCI_RA007_Epitope_Rep2 1137.49720323929 1137.4961099358602 30.377 2 0.16145400804993723 0.0007870916961826052 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 89785 16887 RFEEAHFTF True PC9_epitope_Rep3 1182.5458077337796 1182.54470993586 70.111 2 0.16145373268910604 0.0007870916961826052 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 106464 20349 SVVESVFKL True PC9_epitope_Rep1 1006.5698972232999 1006.56880993586 83.102 2 0.1614528011333235 0.0007870916961826052 0.9438714419765777 ['ENSG00000242372|ENST00000374450|EIF6', 'nc|ENSG00000242372|P56537-2|EIF6'] 29026 15678 FTLDHVQEI True PC9_epitope_Rep6 1100.55022440788 1100.54912993586 72.515 2 0.16144988238659935 0.0007870916961826052 0.9438714419765777 ['ENST00000371317.9_1_X:119737922-119739264:+|nuORF'] 26775 9813 FLDQNLQKY True H1975_Epitope_Rep2 1167.59242357303 1167.5913299358601 42.729 2 0.16144750919442163 0.0007870916961826052 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 1113 5435 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44286993586 25.931 2 0.1614421464500387 0.0007870916961826052 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 124677 20836 VLIPKLPQL True PC9_epitope_Rep1 1019.6743027221899 1019.67320993586 84.973 2 0.16143967149380753 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000172057|Q8N138-4|ORMDL3', 'ENSG00000172057|ENST00000304046|ORMDL3'] 40804 19374 HVIDSIVGDGI True PC9_epitope_Rep3 1123.5873381925899 1123.58624993586 79.747 2 0.1614387772961395 0.0007870916961826052 0.9438714419765777 ['ENSG00000166801|ENST00000675163|FAM111A'] 104716 11781 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.5433099358602 50.307 2 0.1614350433169188 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 14520 11585 DVAASEFFR True H1975_Epitope_Rep1 1040.4927095317598 1040.4916099358602 49.548 2 0.16143125849667664 0.0007870916961826052 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 95004 12478 RYQDIIHSI True PC9_epitope_Rep6 1143.6036569630699 1143.6020249037902 59.419 3 0.16142329145702586 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 88901 6690 REAQSLISA True NCI_RA007_Epitope_Rep1 973.5192586327698 973.51816993586 30.033 2 0.16142289632228052 0.0007870916961826052 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 77464 15342 NYPETLGRLLI True NCI_RA007_Epitope_Rep4 1287.7186867153098 1287.7175899358601 66.674 2 0.16142285046843943 0.0007870916961826052 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 11625 6453 DHASIQM[Oxidation]NV True PC9_epitope_Rep1 1029.45494450449 1029.45384993586 29.627 2 0.1614138979457342 0.0007870916961826052 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 75126 13014 NM[Oxidation]VDIIHSV True PC9_epitope_Rep4 1042.5117311046201 1042.5106299358602 57.952 2 0.16140772628400923 0.0007870916961826052 0.9438714419765777 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 43397 12199 IHSENFQTL True PC9_epitope_Rep3 1087.5298233164701 1087.5287299358602 51.955 2 0.16140373910620992 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP'] 8551 18563 ATYVFLHTV True PC9_epitope_Rep5 1049.5545815123298 1049.5534899358602 76.428 2 0.16140138705486784 0.0007870916961826052 0.9438714419765777 ['ENSG00000123353|ENST00000243045|ORMDL2'] 2381 10785 AEQIARWIA True H1975_Epitope_Rep3 1056.5716285587998 1056.5705299358601 46.564 2 0.1613918654810776 0.0007870916961826052 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 74670 23574 NLIDLDDLYV True PC9_epitope_Rep1 1191.6023195503901 1191.6012299358601 95.465 2 0.16138905153940947 0.0007870916961826052 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 86997 19205 QRYNSFISL True PC9_epitope_Rep1 1126.5771078620598 1126.5760099358602 78.667 2 0.16138439962031867 0.0007870916961826052 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 75773 4915 NRAPNTAEL True PC9_epitope_Rep4 984.4988575413599 984.49776993586 25.5 2 0.1613821079319442 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 112987 14749 TPSPLPTV True PC9_epitope_Rep4 810.4487194614601 810.44762993586 64.665 2 0.16138188468413495 0.0007870916961826052 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 136915 13826 YKDGTELEL True PC9_epitope_Rep5 1066.51825557326 1066.51714993586 58.202 2 0.1613745393177577 0.0007870916961826052 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 115477 17698 TVFTDHMLTV True PC9_epitope_Rep6 1162.5692456002998 1162.5681499358602 80.711 2 0.1613636060051523 0.0007870916961826052 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 104095 20919 SRVPLLLPL True PC9_epitope_Rep2 1006.65390163078 1006.65280993586 85.911 2 0.16135627709255973 0.0007870916961826052 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 104925 6153 STFSTNYR True PC9_epitope_Rep2 974.4457593393399 974.44466993586 29.059 2 0.16135414487066654 0.0007870916961826052 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 75776 6144 NRAPNTAEL True PC9_epitope_Rep5 984.4988575413599 984.49776993586 28.617 2 0.16135308385595695 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 76293 13515 NSDVSLLNY True H1975_Epitope_Rep2 1023.48728979815 1023.48677496793 57.12 1 0.1613407176759309 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 105719 12106 SVHKGFAFV True PC9_epitope_Rep5 990.5287011176598 990.52760993586 51.557 2 0.16133890006349216 0.0007870916961826052 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 72391 6341 M[Oxidation]TEGSTVNTEY True H1975_Epitope_Rep2 1246.50234818938 1246.5012499358602 29.32 2 0.16133535405563584 0.0007870916961826052 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 8050 6243 ATDYHVRVY True H1975_Epitope_Rep2 1122.5458077337798 1122.54415490379 28.969 3 0.16133060984207293 0.0007870916961826052 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF'] 94280 20132 RWSPVRPLVF True PC9_epitope_Rep3 1255.71896149883 1255.71786993586 82.691 2 0.1613242517984388 0.0007870916961826052 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 42891 18447 IFTDLSSRF True PC9_epitope_Rep4 1084.55530978832 1084.5542099358602 79.027 2 0.16131670129638326 0.0007870916961826052 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 105631 10088 SVFESLIAKK True NCI_RA007_Epitope_Rep4 1120.6492101731599 1120.64810993586 45.653 2 0.16131397523679816 0.0007870916961826052 0.9438714419765777 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 39808 11903 HQELFPHSL True PC9_epitope_Rep4 1106.55089311422 1106.5497899358602 53.562 2 0.1613102942454439 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 139841 12689 YVDIICPHY True H1975_Epitope_Rep2 1121.52156713189 1121.52046993586 53.909 2 0.16130713727274532 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155100369-155106166:+|nuORF'] 40833 13926 HVLDVIHEV True PC9_epitope_Rep4 1059.57129420563 1059.57018993586 61.47 2 0.16130354694320617 0.0007870916961826052 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 41025 8002 HYGQSGISM True PC9_epitope_Rep2 978.4229157197799 978.42180993586 36.141 2 0.16130252462182842 0.0007870916961826052 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 109625 17718 THDGSILIVP True PC9_epitope_Rep5 1050.57095985246 1050.5698699358602 73.169 2 0.16129931030924904 0.0007870916961826052 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 114800 12615 TTDDPALLY True H1975_Epitope_Rep3 1007.4811417885498 1007.48057496793 53.729 1 0.16129881390287337 0.0007870916961826052 0.9438714419765777 ['ENSG00000182749|ENST00000675840|PAQR7'] 138021 20460 YQDEVFGGF True PC9_epitope_Rep4 1060.4501760134397 1060.44967496793 86.844 1 0.1612988092471483 0.0007870916961826052 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 82156 11269 PTDYADIM[Oxidation]M[Oxidation]GY True H1975_Epitope_Rep2 1307.50499142211 1307.5038899358601 48.39 2 0.1612981646839519 0.0007870916961826052 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 40425 11353 HRYGDSEFTV True PC9_epitope_Rep5 1209.54145062933 1209.5398049037901 48.665 3 0.1612958549056054 0.0007870916961826052 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 6793 18945 AQFEHTILL True PC9_epitope_Rep3 1070.5760452329 1070.57494993586 78.097 2 0.16129495028242782 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2'] 20666 9272 EQIAEFKEA True PC9_epitope_Rep4 1063.51858992643 1063.51748993586 43.269 2 0.1612944388164543 0.0007870916961826052 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALM1|p.T6I|2|0.38|ENSG00000198668|chr14:90400078-90400078|C/T|missense_variant'] 1567 5015 AEFAEVSK True NCI_RA007_Epitope_Rep4 879.43379767331 879.43270993586 25.774 2 0.1612914763414508 0.0007870916961826052 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 132485 5538 VYPEEHSRW True NCI_RA007_Epitope_Rep3 1201.55162139021 1201.54996490379 28.781 3 0.16129131827149887 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000117616|Q9BUV0-3|RSRP1', 'nc|ENSG00000117616|Q9BUV0-2|RSRP1', 'ENSG00000117616|ENST00000243189|RSRP1'] 69858 17046 LYANM[Oxidation]FERL True PC9_epitope_Rep1 1171.56958033391 1171.56848993586 70.393 2 0.1612873117369 0.0007870916961826052 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 53887 9783 KYIEGVSDF True NCI_RA007_Epitope_Rep3 1056.51277627 1056.51166993586 45.545 2 0.1612829566935172 0.0007870916961826052 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 137992 20836 YQAPDIDVQL True PC9_epitope_Rep3 1160.57135377528 1160.5702499358601 85.417 2 0.16127572365894843 0.0007870916961826052 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 8093 10513 ATELQSMM[Oxidation]Y True H1975_Epitope_Rep3 1088.45183327 1088.4507299358602 45.502 2 0.16127495800091182 0.0007870916961826052 0.9438714419765777 ['ENSG00000196284|ENST00000371459|SUPT3H'] 83888 13025 QEIEHVFLV True H1975_Epitope_Rep3 1112.5866099165999 1112.58550993586 55.337 2 0.16127211076469572 0.0007870916961826052 0.9438714419765777 ['STK32C|p.D191Tfs*3|1|0.11|ENSG00000165752|chr10:132226868-132226868|C/-|frameshift_variant', 'nc|ENSG00000165752|Q86UX6-2|STK32C', 'ENSG00000165752|ENST00000298630|STK32C'] 97983 7467 SHSELIHNL True PC9_epitope_Rep4 1048.5301576696402 1048.5290699358602 36.076 2 0.1612580791368333 0.0007870916961826052 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 38589 12997 HHGYSYIL True PC9_epitope_Rep5 988.4766655448 988.47556993586 55.002 2 0.16125643237780754 0.0007870916961826052 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 128759 4944 VSQEPFPNK True NCI_RA007_Epitope_Rep5 1044.5240096600398 1044.52290993586 25.718 2 0.16124634354071243 0.0007870916961826052 0.9438714419765777 ['ENSG00000134986|ENST00000257435|NREP', 'ENST00000507742.5_1_5:111066620-111092910:-|nuORF', 'nc|ENSG00000134986|Q16612-2|NREP'] 70517 16949 LYTEKFEEF True PC9_epitope_Rep4 1204.5652057656796 1204.5641099358602 73.184 2 0.16124476995755796 0.0007870916961826052 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 22186 8396 ETDAQSITY True H1975_Epitope_Rep3 1026.4505699362599 1026.4494699358602 37.279 2 0.1612446682225115 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 9365 16807 AVTVMFDKV True PC9_epitope_Rep5 1008.5314035395999 1008.53030993586 69.656 2 0.16124120659114471 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 129808 18021 VTLDNGIIRV True PC9_epitope_Rep4 1098.6397081186199 1098.6386099358601 77.38 2 0.1612388601629041 0.0007870916961826052 0.9438714419765777 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75651254-75651557:-|nuORF', 'ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 52838 15343 KQVSDLISV True PC9_epitope_Rep1 987.5600608155898 987.55896993586 63.835 2 0.16123877749415072 0.0007870916961826052 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 47477 12698 IYKDYQYYF True NCI_RA007_Epitope_Rep5 1301.59684024713 1301.59574993586 55.503 2 0.1612352826819695 0.0007870916961826052 0.9438714419765777 ['ENSG00000260314|ENST00000569591|MRC1'] 118378 19294 VDIVAINDPFI True H1975_Epitope_Rep1 1214.65468947642 1214.65358993586 80.385 2 0.16123423042185264 0.0007870916961826052 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF', 'ENST00000438477.2_1_1:120039232-120039448:-|nuORF', 'ENST00000423411.2_1_6:135941072-135941228:-|nuORF'] 95257 6288 SADPDNLKY True H1975_Epitope_Rep3 1021.4716397340101 1021.47054993586 29.192 2 0.1612309562047891 0.0007870916961826052 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1'] 97591 14274 SHADLAGVPL True PC9_epitope_Rep4 978.5134449763399 978.51234993586 62.807 2 0.16122286549878842 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 43621 17081 IIIPEIQKV True PC9_epitope_Rep6 1051.66413196131 1051.66302993586 78.27 2 0.1612133904297475 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 46721 4439 IVAGTLTNK True NCI_RA007_Epitope_Rep3 915.53893144819 915.53782993586 24.259 2 0.1612013244628254 0.0007870916961826052 0.9438714419765777 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 68880 9220 LVEIADTVPK True H1975_Epitope_Rep3 1083.6175756917098 1083.61646993586 40.457 2 0.1612002248908749 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENSG00000137040|ENST00000259569|RANBP6'] 120163 18524 VFLENVIR True PC9_epitope_Rep1 988.5705659296399 988.56946993586 76.041 2 0.16119889509821964 0.0007870916961826052 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 44147 23295 ILPPQLALF True PC9_epitope_Rep1 1010.6164534928998 1010.61534993586 94.393 2 0.16119820651106057 0.0007870916961826052 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 116660 11275 TYIPVPAKI True NCI_RA007_Epitope_Rep4 1000.5957180483199 1000.59462993586 50.264 2 0.16119776894585464 0.0007870916961826052 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 73813 9684 NHDTGEYVL True PC9_epitope_Rep4 1046.46688870674 1046.4657899358601 44.879 2 0.16119656593149628 0.0007870916961826052 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 67348 6173 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep1 1056.49099566004 1056.4898899358602 28.814 2 0.16119277745009716 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 24587 21743 FAMEIDPSL True PC9_epitope_Rep1 1021.4790336135699 1021.4784749679301 88.467 1 0.1611871884638662 0.0007870916961826052 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 98158 6707 SIDDLEEK True PC9_epitope_Rep4 947.44475627983 947.44364993586 32.983 2 0.1611845876686722 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 136367 12928 YHDIAQQAF True PC9_epitope_Rep1 1091.50360856863 1091.5025099358602 54.599 2 0.1611836490244902 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 90201 18616 RHIEIFTDL True PC9_epitope_Rep5 1142.6084079903399 1142.6067749037902 76.633 3 0.16117736952817704 0.0007870916961826052 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 93444 14894 RSDFFTSFY True H1975_Epitope_Rep3 1168.5189242796 1168.5178299358602 62.675 2 0.1611757351866729 0.0007870916961826052 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA', 'nc|ENSG00000090060|P51003-2|PAPOLA', 'ENSG00000218823|ENST00000404991|PAPOLB', 'PAPOLB|p.K137E|1|0.26|ENSG00000218823|chr7:4861402-4861402|T/C|missense_variant'] 132415 12221 VYNKVHITL True PC9_epitope_Rep5 1085.62332977849 1085.62222993586 51.995 2 0.1611733822317409 0.0007870916961826052 0.9438714419765777 ['ENSG00000166228|ENST00000299299|PCBD1', 'ENST00000493228.1_1_10:72643709-72647885:-|nuORF'] 74799 20959 NLNPEFISV True PC9_epitope_Rep5 1031.5287606873098 1031.52766993586 85.679 2 0.1611671164809979 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 45445 18760 ISEDDPFLLY True H1975_Epitope_Rep2 1210.5757704493801 1210.5746699358601 77.884 2 0.16116034876598043 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100890|O15091-2|PRORP', 'ENSG00000100890|ENST00000534898|PRORP', 'nc|ENSG00000100890|O15091-4|PRORP', 'nc|ENSG00000100890|O15091-3|PRORP'] 27404 7424 FNDPNAKEM True PC9_epitope_Rep1 1064.45969515132 1064.4585899358601 33.372 2 0.16115426630042531 0.0007870916961826052 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 3496 10091 AGLQFPVGR True NCI_RA007_Epitope_Rep5 943.5239500903898 943.52284993586 45.451 2 0.1611481989433449 0.0007870916961826052 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 4014 6335 AHIPKSDAL True PC9_epitope_Rep1 950.5185303567799 950.51742993586 29.179 2 0.1611369325328352 0.0007870916961826052 0.9438714419765777 ['NFE2L2-PDE11A|3|fusion', 'NFE2L2-PDE11A|1|fusion', 'NFE2L2-PDE11A|2|fusion', 'nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 104040 19165 SRSWLSYSY True PC9_epitope_Rep3 1147.5298233164701 1147.5287299358602 78.938 2 0.16113669364573027 0.0007870916961826052 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3'] 61958 23721 LLLPDYYLVTV True PC9_epitope_Rep5 1307.73769082439 1307.7365899358601 96.223 2 0.16112489833663346 0.0007870916961826052 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 14899 14143 DYKESFNTI True PC9_epitope_Rep4 1115.5135045459901 1115.5124099358602 62.305 2 0.1611240282658736 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 127370 13633 VQPSLFYHL True NCI_RA007_Epitope_Rep4 1102.58113061334 1102.58002993586 59.659 2 0.1611237331871201 0.0007870916961826052 0.9438714419765777 ['MAP3K6|p.D642*|1|0.14|ENSG00000142733|chr1:27360835-27360836|-/A|frameshift_variant', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'ENSG00000142733|ENST00000357582|MAP3K6'] 43618 19171 IIIPEIQKV True PC9_epitope_Rep5 1051.66413196131 1051.66302993586 78.778 2 0.16112052456667714 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 6606 19392 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 79.815 2 0.16111547322057612 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 60633 7380 LITEDVQGK True PC9_epitope_Rep1 1001.5393253710098 1001.53822993586 33.199 2 0.1611111909658702 0.0007870916961826052 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF'] 113365 20791 TQLDLEDVQV True PC9_epitope_Rep1 1158.57683307854 1158.5757299358602 84.803 2 0.16110302972426055 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 31230 14362 GDLGIEIPAEK True PC9_epitope_Rep6 1140.60265390356 1140.60154993586 67.139 2 0.16109175153972777 0.0007870916961826052 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 21301 8748 ERIQHAVQL True PC9_epitope_Rep5 1092.60399131624 1092.60288993586 38.591 2 0.16108945405041564 0.0007870916961826052 0.9438714419765777 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 77576 21080 NYSPYVNYF True PC9_epitope_Rep5 1165.50802524273 1165.50747496793 86.146 1 0.16108419578779656 0.0007870916961826052 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 106389 5740 SVSTVLTSK True NCI_RA007_Epitope_Rep4 920.51786165044 920.51676993586 28.698 2 0.16108167839702192 0.0007870916961826052 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 109755 19185 THIETVINAL True PC9_epitope_Rep5 1109.60807363717 1109.6069699358602 78.833 2 0.16108044649259634 0.0007870916961826052 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENST00000524952.2_1_11:985541-988707:+|nuORF', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 8174 8852 ATGDMSGLLK True NCI_RA007_Epitope_Rep5 991.5008316873099 991.49972993586 40.714 2 0.16107794254019875 0.0007870916961826052 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 118162 15156 VAVPLYDTL True NCI_RA007_Epitope_Rep3 989.54334812229 989.54224993586 67.135 2 0.16107564620155757 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 87794 19735 QVIEELFKA True PC9_epitope_Rep1 1075.5913609438699 1075.59026993586 80.738 2 0.16107338497686494 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000137513|Q96I59-2|NARS2', 'ENSG00000137513|ENST00000281038|NARS2'] 114287 8212 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 39.436 2 0.16107020876113728 0.0007870916961826052 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 83092 22763 PYNDYFEYF True PC9_epitope_Rep3 1256.50260550912 1256.5015099358602 92.827 2 0.16106159003396153 0.0007870916961826052 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 105580 6625 SVEAAAELSAK True NCI_RA007_Epitope_Rep1 1074.55570371114 1074.55460993586 29.783 2 0.16105170729986146 0.0007870916961826052 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 99363 10902 SLDVGGPLRY True H1975_Epitope_Rep1 1075.56620882519 1075.5651099358602 46.897 2 0.16104886807802007 0.0007870916961826052 0.9438714419765777 ['ENSG00000176894|ENST00000317479|PXMP2'] 27830 19216 FQIVNPHLL True PC9_epitope_Rep4 1079.61276509479 1079.6116699358602 82.015 2 0.16104799787657864 0.0007870916961826052 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 127324 16836 VQNDTLLQV True PC9_epitope_Rep6 1028.5502244078798 1028.54912993586 77.274 2 0.16104535982870688 0.0007870916961826052 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 139426 16124 YTELEAIMY True H1975_Epitope_Rep1 1131.5158130451098 1131.51470993586 67.364 2 0.1610442203131217 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 18796 12089 ELDTPINY True H1975_Epitope_Rep2 963.4549270407099 963.45382993586 51.583 2 0.1610392976493572 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 62166 14420 LLPHVVPGTT True PC9_epitope_Rep1 1032.59678067748 1032.59568993586 60.291 2 0.16103894918070782 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 114867 10480 TTDPYLTNSY True H1975_Epitope_Rep1 1173.5189838492502 1173.51788993586 45.266 2 0.16103284497766568 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 74234 12156 NIDPITM[Oxidation]AY True H1975_Epitope_Rep3 1052.48484765044 1052.4842749679299 51.928 1 0.16103221911397927 0.0007870916961826052 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 116762 17662 TYLEKFQNL True PC9_epitope_Rep2 1154.5971746002997 1154.5960699358602 73.217 2 0.16103073355211062 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 29186 11789 FVAESHIIL True H1975_Epitope_Rep2 1027.57023157647 1027.56912993586 50.42 2 0.16103055288091564 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 120855 15318 VGDPSVHLL True PC9_epitope_Rep5 935.5076313199099 935.50652993586 63.932 2 0.16102728177846407 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 125150 19007 VLPSVLNKF True PC9_epitope_Rep2 1015.60661708519 1015.60552993586 78.475 2 0.16102580189592727 0.0007870916961826052 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 115955 5483 TVPVEAVTSK True H1975_Epitope_Rep3 1029.57062549929 1029.5695299358601 26.143 2 0.161022270484358 0.0007870916961826052 0.9438714419765777 ['ERBB2-CTTN|3|fusion', 'ERBB2-CTTN|1|fusion', 'ERBB2-CTTN|4|fusion', 'ERBB2-CTTN|2|fusion', 'ENST00000393747.3_1_11:70269077-70281851:+|nuORF', 'nc|ENSG00000085733|Q14247-3|CTTN', 'ENSG00000085733|ENST00000301843|CTTN', 'nc|ENSG00000085733|Q14247-2|CTTN'] 120269 16359 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 68.17 2 0.16102109629566014 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 39877 10843 HQIEAVDGEEL True PC9_epitope_Rep6 1238.5778957076998 1238.57678993586 52.567 2 0.16102044940757707 0.0007870916961826052 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 107923 11948 TAVTVNQSL True PC9_epitope_Rep2 931.4974605590301 931.49636993586 51.28 2 0.16101979573982292 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 25561 12106 FESEFVHVV True H1975_Epitope_Rep2 1091.5287606873098 1091.52766993586 51.649 2 0.1610190171824505 0.0007870916961826052 0.9438714419765777 ['ATP9B|p.T1064Rfs*5|1|0.1|ENSG00000166377|chr18:79374017-79374017|A/-|frameshift_variant', 'nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B', 'ENST00000587410.1_1_18:77132833-77134205:+|nuORF', 'ENST00000588921.1_3_18:77132616-77137380:+|nuORF'] 9987 11348 AYSRVQYQF True PC9_epitope_Rep6 1160.5614577979202 1160.56036993586 54.69 2 0.16101560907783136 0.0007870916961826052 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 28466 11712 FSEQVAMGY True H1975_Epitope_Rep2 1030.4429824580197 1030.4418899358602 50.125 2 0.1610029265942349 0.0007870916961826052 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 104011 20469 SRSETFLLL True PC9_epitope_Rep3 1064.5866099165999 1064.58550993586 83.992 2 0.1609899004601759 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A'] 103184 13828 SQPPVQVSV True PC9_epitope_Rep1 939.5025459394699 939.50144993586 58.032 2 0.16098913279015925 0.0007870916961826052 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 140570 19165 YYLQHPPISF True PC9_epitope_Rep4 1263.62880908175 1263.6277099358601 81.817 2 0.16098804466677474 0.0007870916961826052 0.9438714419765777 ['ENST00000572585.5_1_17:909322-915797:-|nuORF', 'nc|ENSG00000159842|Q12979-3|ABR', 'nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR'] 42655 8757 IEVDSSPSV True H1975_Epitope_Rep2 931.44984166027 931.4492949679301 38.647 1 0.16098317810822513 0.0007870916961826052 0.9438714419765777 ['ENSG00000181467|ENST00000323534|RAP2B', 'ENSG00000125249|ENST00000245304|RAP2A', 'ENSG00000123728|ENST00000370874|RAP2C'] 40608 11249 HTDVGLLEY True H1975_Epitope_Rep1 1045.50802524273 1045.5069299358602 48.245 2 0.16098074273030996 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF'] 17236 8643 EHALGTPEV True PC9_epitope_Rep2 951.4661604307499 951.46506993586 38.611 2 0.16097774670215012 0.0007870916961826052 0.9438714419765777 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX', 'nc|ENSG00000114439|Q8WY36-3|BBX'] 113978 19916 TRLEMYNIL True PC9_epitope_Rep2 1151.6008800817501 1151.5997899358601 82.002 2 0.16097653341918258 0.0007870916961826052 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 136958 18539 YKIPYTTVL True PC9_epitope_Rep4 1096.61684741572 1096.61574993586 79.385 2 0.16097361234642607 0.0007870916961826052 0.9438714419765777 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 28035 16230 FRAPQVMTY True PC9_epitope_Rep5 1111.54845058607 1111.5473499358602 67.417 2 0.16096430964895495 0.0007870916961826052 0.9438714419765777 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263'] 9441 6823 AVVTQVNKV True PC9_epitope_Rep3 956.5654805492 956.56438993586 31.261 2 0.16096291317633776 0.0007870916961826052 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 15108 11347 EADVAQLEY True H1975_Epitope_Rep3 1036.47130538084 1036.4707749679299 48.757 1 0.1609589574637465 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 45094 6667 IQRTPKIQVYS True NCI_RA007_Epitope_Rep4 1331.75613485319 1331.7544949037901 32.266 3 0.16095793636087463 0.0007870916961826052 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 67228 11902 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48076993586 50.782 2 0.16094701574498138 0.0007870916961826052 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 75367 13538 NQDDSILKV True PC9_epitope_Rep3 1030.5294889632999 1030.52838993586 57.128 2 0.1609441907630742 0.0007870916961826052 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 698 10772 AAVGFPTHL True H1975_Epitope_Rep1 911.48650195251 911.48540993586 46.396 2 0.16094302908206842 0.0007870916961826052 0.9438714419765777 ['ENSG00000177352|ENST00000321895|CCDC71'] 40130 11959 HRDSGILGL True PC9_epitope_Rep2 966.5246783663799 966.52358993586 51.321 2 0.1609369995669311 0.0007870916961826052 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 116670 14945 TYIPVPAKI True PC9_epitope_Rep6 1000.5957180483199 1000.59462993586 69.49 2 0.16093032112015573 0.0007870916961826052 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 11731 8141 DHHENKYLL True PC9_epitope_Rep1 1167.56727145435 1167.56563490379 36.145 3 0.1609273960958094 0.0007870916961826052 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 968 7358 AEAAPPLRP True H1975_Epitope_Rep2 920.50796567308 920.50686993586 33.244 2 0.16091383079002194 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 1443 13375 AEEIPLKILA True H1975_Epitope_Rep1 1095.6539612004299 1095.65286993586 56.557 2 0.16091202092667556 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'ENST00000435000.2_1_1:146523151-146523364:+|nuORF', 'ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 106527 14095 SVVSDILFK True NCI_RA007_Epitope_Rep4 1006.5698972233 1006.56880993586 61.497 2 0.16091176477697053 0.0007870916961826052 0.9438714419765777 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-3|TBC1D2B', 'ENST00000472786.1_1_15:78295640-78309087:-|nuORF'] 74039 20007 NHSELAILL True PC9_epitope_Rep5 1008.5603951687599 1008.55928993586 82.012 2 0.16090438186570855 0.0007870916961826052 0.9438714419765777 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF'] 28406 11144 FSDVNMQEY True H1975_Epitope_Rep1 1131.4542754177098 1131.4531699358602 47.834 2 0.16090209853902945 0.0007870916961826052 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 101817 13546 SPIENIQRVAA True PC9_epitope_Rep5 1196.6513354314802 1196.6502299358601 57.128 2 0.16090193183032814 0.0007870916961826052 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 72907 14965 NAVYTFETL True NCI_RA007_Epitope_Rep4 1056.51277627 1056.51227496793 65.028 1 0.16089837345324828 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 98161 6334 SIDDQSQQSY True H1975_Epitope_Rep3 1169.4836609696902 1169.48256993586 29.354 2 0.16089451266710272 0.0007870916961826052 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 105011 3215 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 17.961 3 0.1608943676396992 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 57929 7469 LEQLSPVRA True H1975_Epitope_Rep2 1011.5712942056299 1011.57018993586 33.678 2 0.16089361354364567 0.0007870916961826052 0.9438714419765777 ['ENSG00000116213|ENST00000270708|WRAP73'] 132840 21796 VYTPTDTLVF True PC9_epitope_Rep1 1154.5859412102598 1154.5848499358601 88.658 2 0.1608920961624838 0.0007870916961826052 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 41984 6689 IEDGKVVTV True H1975_Epitope_Rep2 958.53351171458 958.53240993586 30.639 2 0.160891221134959 0.0007870916961826052 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF'] 120297 10507 VFPEKGYSF True NCI_RA007_Epitope_Rep3 1072.5229470308798 1072.52184993586 48.391 2 0.1608887151122997 0.0007870916961826052 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 100233 23308 SLLPAIVEL True PC9_epitope_Rep1 953.57973363101 953.57918496793 94.442 1 0.1608865713095755 0.0007870916961826052 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 75542 9648 NQLIRTSGV True PC9_epitope_Rep3 986.55089311422 986.54978993586 42.059 2 0.16088120598467934 0.0007870916961826052 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 86858 17339 QRQQLLVSL True PC9_epitope_Rep3 1083.64004247179 1083.6389499358602 71.867 2 0.16087901707068775 0.0007870916961826052 0.9438714419765777 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 91538 19582 RPADVIFATV True PC9_epitope_Rep1 1087.60259433391 1087.6014899358602 80.149 2 0.16087715333831934 0.0007870916961826052 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 8112 3467 ATEQPLTAK True NCI_RA007_Epitope_Rep4 957.5131106231698 957.51200993586 19.272 2 0.1608760535233222 0.0007870916961826052 0.9438714419765777 ['ENSG00000120725|ENST00000394817|SIL1'] 10104 15984 AYVPGFAHI True PC9_epitope_Rep6 973.5021520166499 973.50104993586 73.791 2 0.1608745691102666 0.0007870916961826052 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 113681 13593 TRDELEWKL True PC9_epitope_Rep6 1188.6138872935999 1188.61278993586 64.035 2 0.1608740677464226 0.0007870916961826052 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 114521 3927 TSGPTTPLK True NCI_RA007_Epitope_Rep3 900.4916469026 900.49054993586 21.778 2 0.16087400769441873 0.0007870916961826052 0.9438714419765777 ['ENSG00000188112|ENST00000341865|C6orf132'] 8165 14141 [Acetylation]-ATFVELSTK True H1975_Epitope_Rep3 1036.54407671458 1036.5429699358601 59.725 2 0.160867710853712 0.0007870916961826052 0.9438714419765777 ['ENSG00000198074|ENST00000359579|AKR1B10', 'nc|ENSG00000227471|C9JRZ8|AKR1B15'] 75371 13312 NQDDSILKV True PC9_epitope_Rep5 1030.5294889632999 1030.52838993586 56.217 2 0.16086643100355677 0.0007870916961826052 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 3994 20478 AHFPINVVI True PC9_epitope_Rep5 1008.5756513100799 1008.57507496793 83.808 1 0.16086027013721713 0.0007870916961826052 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 6846 10350 AQIEGGVHGL True PC9_epitope_Rep1 979.50869394907 979.50758993586 44.692 2 0.1608473355115618 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 62469 11895 LLSNDEVTIK True PC9_epitope_Rep1 1130.6183039677 1130.61720993586 50.621 2 0.1608362604184318 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 38796 6997 HHYSGNNIEL True PC9_epitope_Rep4 1182.5417849825 1182.5406899358602 34.16 2 0.1608343774360914 0.0007870916961826052 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 53468 19027 KVIEINPYL True PC9_epitope_Rep5 1087.62774645259 1087.62664993586 78.215 2 0.16083286392452714 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'PSMB8|p.G115V|1|0.5|ENSG00000204264|chr6:32842735-32842735|C/A|missense_variant', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 108831 4737 TEQQQRFHEI True H1975_Epitope_Rep3 1314.6316626160599 1314.63001490379 23.346 3 0.1608305344449568 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 29610 18816 FVLGHFILL True H1975_Epitope_Rep2 1057.63243791021 1057.63134993586 78.129 2 0.1608294965281135 0.0007870916961826052 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 85057 13638 QILEKDAVIKV True PC9_epitope_Rep5 1254.75473787086 1254.7531049037902 57.481 3 0.16082535589969804 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 46195 16881 ITDIQIPLDY True H1975_Epitope_Rep2 1189.6230549949698 1189.62247496793 70.178 1 0.16082466934581854 0.0007870916961826052 0.9438714419765777 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 114438 7910 TSDYVSQSY True H1975_Epitope_Rep3 1048.43491987212 1048.43382993586 35.4 2 0.16081740822623306 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 131970 13304 VYGFLRNGF True NCI_RA007_Epitope_Rep4 1071.5501648382299 1071.5490699358602 58.316 2 0.16080560049196302 0.0007870916961826052 0.9438714419765777 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 56792 6500 LEATPDTPA True H1975_Epitope_Rep3 913.4392769765699 913.43872496793 29.972 1 0.16079836428910563 0.0007870916961826052 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 30013 17450 FYHKYFNYL True PC9_epitope_Rep2 1293.61824439805 1293.6166049037902 72.374 3 0.16079494831084468 0.0007870916961826052 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 23889 9134 EYMKHTRLF True PC9_epitope_Rep2 1223.6121134717898 1223.61046490379 40.474 3 0.16079099729439328 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 65064 9732 LSDLGKLSY True H1975_Epitope_Rep1 994.5335117145801 994.53240993586 42.361 2 0.16078925512694078 0.0007870916961826052 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 40739 17138 HTVGELIEV True PC9_epitope_Rep1 995.5287606873098 995.52766993586 70.745 2 0.16078495510471105 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 85484 18923 QLIDIIHTA True PC9_epitope_Rep2 1022.5760452329 1022.57494993586 78.152 2 0.16078400491523565 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 40825 21160 HVLDTLIQL True PC9_epitope_Rep3 1050.60734536118 1050.6062499358602 86.677 2 0.16078006310849202 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 94950 12509 RYPSNLQLF True NCI_RA007_Epitope_Rep3 1136.59784330664 1136.59674993586 56.434 2 0.16077273977412207 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 64014 4560 LQDAEIAR True NCI_RA007_Epitope_Rep5 914.4821448480599 914.48104993586 24.198 2 0.16077264186572462 0.0007870916961826052 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 94930 12163 RYPDSHQLF True PC9_epitope_Rep1 1161.55670677065 1161.55560993586 51.649 2 0.16077176565685855 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 831 7051 ADEGISFR True H1975_Epitope_Rep3 893.42429561877 893.42318993586 32.087 2 0.16076918597392617 0.0007870916961826052 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 80256 9457 PLDHLKPLEY True H1975_Epitope_Rep3 1223.65502382959 1223.6533649037901 41.38 3 0.16076862759280042 0.0007870916961826052 0.9438714419765777 ['ENSG00000135763|ENST00000258243|URB2'] 96231 5029 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 24.424 1 0.16076662886973336 0.0007870916961826052 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 89023 7561 REEEEDFIRAA True H1975_Epitope_Rep2 1363.6368075661499 1363.6357099358602 34.037 2 0.16075497834505847 0.0007870916961826052 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4'] 44788 19833 IPTPIVGV True PC9_epitope_Rep3 794.49019035062 794.4896449679301 81.522 1 0.1607530856877375 0.0007870916961826052 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 77197 19759 NYGQYFTLW True NCI_RA007_Epitope_Rep5 1190.53965972418 1190.53856993586 82.914 2 0.16075070498627977 0.0007870916961826052 0.9438714419765777 ['ENSG00000109929|ENST00000264027|SC5D'] 61855 22737 LLLDVTPLSL True PC9_epitope_Rep4 1082.6587122277 1082.6576099358601 95.676 2 0.1607504186158346 0.0007870916961826052 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 29208 19841 FVCDIRPEI True PC9_epitope_Rep5 1090.5481162329 1090.5470099358602 81.366 2 0.16074720387242486 0.0007870916961826052 0.9438714419765777 ['ENSG00000136888|ENST00000374050|ATP6V1G1'] 32670 13084 GHNAIINTL True PC9_epitope_Rep3 951.5137793295102 951.51268993586 55.352 2 0.16073973301546407 0.0007870916961826052 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 19343 10476 ELNEFLTR True NCI_RA007_Epitope_Rep1 1020.52400966004 1020.52290993586 44.732 2 0.16073613467589581 0.0007870916961826052 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 73275 5585 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 26.486 2 0.16073346122677556 0.0007870916961826052 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 104965 19887 STIAILNSV True PC9_epitope_Rep4 916.5229470308801 916.52184993586 84.628 2 0.16072955651370527 0.0007870916961826052 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 28441 12215 FSEGGERLL True PC9_epitope_Rep4 1006.5083595959 1006.50726993586 54.804 2 0.16072262922660635 0.0007870916961826052 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 14338 4407 DTDSEEEIR True NCI_RA007_Epitope_Rep1 1092.45711186868 1092.45600993586 21.256 2 0.16072095382804402 0.0007870916961826052 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000428512.1_1_10:71923591-71923807:+|nuORF'] 103644 14075 SRDLSSQLL True PC9_epitope_Rep5 1017.54547338061 1017.54436993586 59.153 2 0.16071484975735806 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 48545 8347 KEGEFTLSA True H1975_Epitope_Rep3 980.4814761417199 980.48036993586 37.091 2 0.16070523030090567 0.0007870916961826052 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 113796 9365 TRDSNIIRL True PC9_epitope_Rep2 1086.61455599994 1086.6134499358602 41.357 2 0.16070224805563227 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS'] 113756 7705 TRDPQFQKL True PC9_epitope_Rep1 1131.6036569630699 1131.60254993586 34.457 2 0.16069948855381105 0.0007870916961826052 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 53954 20973 KYITDWQNVF True PC9_epitope_Rep5 1312.6451874218799 1312.6440899358602 85.732 2 0.1606937263343267 0.0007870916961826052 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 48162 11905 KASDLYITL True NCI_RA007_Epitope_Rep3 1022.56481184286 1022.56370993586 53.963 2 0.16068860816125816 0.0007870916961826052 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2'] 92218 18883 RQIDQFLVV True PC9_epitope_Rep4 1116.62914343492 1116.6280499358602 80.719 2 0.16068772278729648 0.0007870916961826052 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 117148 13469 TYSPALNKM[Oxidation]F True PC9_epitope_Rep3 1186.5692459807399 1186.5681499358602 56.857 2 0.1606824663814962 0.0007870916961826052 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 74291 19034 NIIPRFVQV True PC9_epitope_Rep4 1084.6393141958001 1084.63820993586 81.303 2 0.16068220907504493 0.0007870916961826052 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C'] 124399 5581 VLEEGSVEAR True NCI_RA007_Epitope_Rep2 1087.5509526838698 1087.54984993586 26.325 2 0.16068165439562956 0.0007870916961826052 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 77561 19653 NYSNIRFQF True PC9_epitope_Rep3 1187.57235683479 1187.5712499358601 80.831 2 0.16068111970846272 0.0007870916961826052 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 117160 10342 TYSTEPNNL True PC9_epitope_Rep2 1037.46655435357 1037.46544993586 45.106 2 0.16067739476124715 0.0007870916961826052 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 86801 11961 QRNPQGFVL True PC9_epitope_Rep4 1057.5668775315298 1057.56578993586 53.8 2 0.16067418025060073 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 9902 22838 AYPEYLITF True PC9_epitope_Rep5 1115.55391280599 1115.55280993586 92.843 2 0.16066933600493027 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 96127 10602 SEDVTPMEV True H1975_Epitope_Rep2 1005.4324773439699 1005.43197496793 45.803 1 0.1606681123019079 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5', 'NFAT5|p.L1061Ffs*35|2|0.25|ENSG00000102908|chr16:69693055-69693056|-/T|frameshift_variant'] 67596 10897 LTETVVTEY True H1975_Epitope_Rep1 1053.52300660053 1053.5224749679298 46.877 1 0.1606637033017153 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 130554 5445 VTYHMFRTK True NCI_RA007_Epitope_Rep4 1181.6015487880898 1181.59990490379 27.524 3 0.1606625351030378 0.0007870916961826052 0.9438714419765777 ['ENST00000453465.1_1_10:21915067-21915193:-|nuORF', 'ENST00000478691.5_1_1:23664326-23665089:-|nuORF'] 35186 6693 GSDKINYTY True H1975_Epitope_Rep2 1059.48728979815 1059.48618993586 30.654 2 0.16065817580685732 0.0007870916961826052 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 75026 14480 NMDNMFESY True H1975_Epitope_Rep3 1149.41069635357 1149.4101749679298 61.056 1 0.1606531514907631 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 104352 3819 SSFEHEFKK True NCI_RA007_Epitope_Rep4 1137.5454733806098 1137.54382490379 20.878 3 0.16065208902319905 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170653|P17544-2|ATF7', 'nc|ENSG00000170653|P17544-3|ATF7', 'ENSG00000170653|ENST00000420353|ATF7', 'nc|ENSG00000170653|P17544-1|ATF7', 'ENST00000550373.2_1_12:53937026-53937696:-|nuORF', 'nc|ENSG00000170653|P17544-5|ATF7', 'nc|ENSG00000170653|P17544-4|ATF7'] 23837 17069 EYLLKVNEI True PC9_epitope_Rep6 1119.61757569171 1119.61646993586 78.22 2 0.16064580498442171 0.0007870916961826052 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 89780 15225 RFEEAHFTF True PC9_epitope_Rep2 1182.5458077337796 1182.54470993586 63.828 2 0.16064126618460717 0.0007870916961826052 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 110931 20231 TLATDILM[Oxidation]GV True PC9_epitope_Rep6 1048.547447907 1048.54634993586 90.501 2 0.160630971768416 0.0007870916961826052 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 75558 20177 NQMDGFDTL True PC9_epitope_Rep1 1039.4280606698699 1039.4269699358601 82.44 2 0.1606217489421528 0.0007870916961826052 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 67353 6757 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 30.906 2 0.16061962088719084 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 25337 13925 FEFGVDPSA True H1975_Epitope_Rep2 967.4287122928698 967.42760993586 58.71 2 0.1606085763059955 0.0007870916961826052 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 63382 13781 LPFPIIDDR True H1975_Epitope_Rep1 1084.59169529704 1084.5905899358602 58.151 2 0.16060566667126427 0.0007870916961826052 0.9438714419765777 ['ENSG00000117592|ENST00000340385|PRDX6'] 109207 11686 TFTFSHATF True NCI_RA007_Epitope_Rep3 1057.4868958753298 1057.48578993586 53.083 2 0.16060534680113758 0.0007870916961826052 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 98935 14262 SIYNGDMEKI True PC9_epitope_Rep2 1168.5434247752798 1168.5423299358602 60.124 2 0.16060525524459338 0.0007870916961826052 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 12560 9119 DLDHSIGTQY True H1975_Epitope_Rep3 1147.51456717515 1147.51346993586 40.065 2 0.16060036963586027 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4'] 31287 7679 GDVDVSLPK True H1975_Epitope_Rep1 928.48656152216 928.48546993586 34.503 2 0.1605991944130121 0.0007870916961826052 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant'] 34449 14751 GQASLGVIKV True PC9_epitope_Rep5 970.58113061334 970.58002993586 61.739 2 0.16059734660605604 0.0007870916961826052 0.9438714419765777 ['ENSG00000173145|ENST00000371361|NOC3L'] 17853 12520 EIAQEFKTDLR True PC9_epitope_Rep5 1348.6986795467199 1348.6970249037902 53.158 3 0.16059422533129072 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 53942 5606 KYISKPENL True PC9_epitope_Rep4 1090.60225998074 1090.60116993586 28.358 2 0.16059284153557668 0.0007870916961826052 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 44031 20438 ILLAELEQLK True PC9_epitope_Rep2 1168.7067250492798 1168.70562993586 84.042 2 0.1605899280341697 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 24676 7548 FATHAAALSVR True PC9_epitope_Rep2 1142.6196413803798 1142.61799490379 34.398 3 0.1605823530853389 0.0007870916961826052 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 90195 16711 RHIEIFTDL True PC9_epitope_Rep2 1142.6084079903399 1142.6067749037902 69.526 3 0.16057988324036365 0.0007870916961826052 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 37375 10172 GVYGDVQRV True PC9_epitope_Rep1 991.5086939490699 991.50758993586 44.003 2 0.16057779177647885 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'PTBP2|p.A484Rfs*2|2|0.3|ENSG00000117569|chr1:96813062-96813063|-/T|frameshift_variant', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 54597 9222 LADDSVRSL True PC9_epitope_Rep4 974.50327421546 974.50216993586 43.07 2 0.16057650262087325 0.0007870916961826052 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 114292 8539 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.58478993586 39.638 2 0.1605759790434732 0.0007870916961826052 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 87000 19099 QRYNSFISL True PC9_epitope_Rep5 1126.5771078620598 1126.5760099358602 78.494 2 0.16057211655034834 0.0007870916961826052 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 104840 7937 STELNHLGY True H1975_Epitope_Rep1 1032.48762415132 1032.48652993586 35.479 2 0.16057171461171885 0.0007870916961826052 0.9438714419765777 ['ENST00000568636.5_1_16:720997-722003:+|nuORF', 'ENST00000569358.5_1_16:720997-722561:+|nuORF', 'ENST00000602564.5_1_16:720997-722561:+|nuORF', 'ENSG00000140983|ENST00000315082|RHOT2'] 88201 23332 QYAPLLAVF True PC9_epitope_Rep5 1020.5644179200399 1020.56387496793 94.728 1 0.16056545485336401 0.0007870916961826052 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 4313 10034 AILLPQPPK True NCI_RA007_Epitope_Rep4 975.61170246563 975.61060993586 45.438 2 0.16056295873170806 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132256|Q9C035-4|TRIM5', 'ENST00000437681.1_1_1:28835797-28835884:+|nuORF', 'AluY_dup64372|chr11:882046-882337:+|1.6767132008831576|0.3489879065155246|2.26|501.0|12|1|anti-sense', 'AluSx1_dup39678|chr6:158168952-158169236:+|1.0979164187189252|0.0024502072239592|8.81|331.0|15|3|anti-sense', 'chr7:5602838-5603257|261|10.47|0.37|4.81|+|0|TE_info:AluJo,AluJo_dup27100,Alu,SINE,donor,-,5602691,5602838|None,FSCN1|1', 'ENST00000483835.5_1_11:5685320-5686489:-|nuORF', 'ENST00000608290.1_1_22:46409584-46410459:+|nuORF', 'ENST00000567741.1_1_1:25644693-25663698:-|nuORF', 'ENST00000591166.1_1_17:42259005-42263988:-|nuORF', 'ENST00000585457.5_1_17:42259005-42264009:-|nuORF', 'nc|ENSG00000204370|O14521-4|SDHD', 'nc|ENSG00000137090|Q9Y5R6-3|DMRT1', 'ENST00000496007.5_1_1:1324344-1326370:-|nuORF', 'ENST00000452360.6_1_4:942397-950358:+|nuORF'] 75797 9692 NRAQIQTVI True PC9_epitope_Rep4 1041.59309227937 1041.59198993586 44.914 2 0.16056246147945605 0.0007870916961826052 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 109753 16286 THIDTVINAL True PC9_epitope_Rep6 1095.59242357303 1095.5913299358601 75.004 2 0.1605598124720275 0.0007870916961826052 0.9438714419765777 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF'] 70385 19824 LYQEVFGRL True PC9_epitope_Rep1 1123.6025943339098 1123.6014899358602 81.067 2 0.1605596065222597 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 21280 14985 ERINNINIL True PC9_epitope_Rep6 1097.61930702721 1097.61820993586 69.653 2 0.1605592987738079 0.0007870916961826052 0.9438714419765777 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 4075 9203 AHSESINVI True PC9_epitope_Rep4 968.4927095317599 968.49160993586 42.996 2 0.16055262299594877 0.0007870916961826052 0.9438714419765777 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'nc|ENSG00000100592|Q9Y4D1-3|DAAM1'] 117174 15257 TYTDRVFFL True NCI_RA007_Epitope_Rep5 1160.5866099165999 1160.58550993586 65.378 2 0.16055052498660966 0.0007870916961826052 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 30105 14144 FYPPKVELF True NCI_RA007_Epitope_Rep3 1138.60628273202 1138.6051899358602 62.921 2 0.16054784034726072 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 112525 7535 TPAEPYARV True PC9_epitope_Rep4 1002.5134449763399 1002.51234993586 36.352 2 0.1605477780624517 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A'] 60979 5716 LLAGPPGTGK True H1975_Epitope_Rep3 909.52836676449 909.52726993586 27.015 2 0.1605463396224471 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 56919 7234 LEDRPANLP True H1975_Epitope_Rep2 1023.53490869691 1023.53380993586 32.762 2 0.16054533687293776 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132405|Q9P2M4-2|TBC1D14', 'ENSG00000132405|ENST00000409757|TBC1D14'] 85831 16076 QMISRIEYV True PC9_epitope_Rep5 1137.58523001761 1137.5841299358601 66.825 2 0.16054378919498477 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 73885 2613 NHHLQETSF True PC9_epitope_Rep2 1111.50467119779 1111.50356993586 14.709 2 0.1605433610258984 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 109893 5231 THNPTNATL True PC9_epitope_Rep1 967.47230844035 967.47120993586 24.97 2 0.16054082756807864 0.0007870916961826052 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 28167 13858 FRMTDQEAI True PC9_epitope_Rep3 1109.5175443806097 1109.51644993586 58.385 2 0.16054023394068032 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 29085 12377 FTQGHIVEV True PC9_epitope_Rep1 1028.52909504048 1028.5279899358602 52.467 2 0.160534681240972 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 84931 15133 QHVPGSPFSV True PC9_epitope_Rep1 1053.52434401321 1053.5232499358601 63.029 2 0.16053432829935613 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 132590 12238 VYPPPHQVF True PC9_epitope_Rep2 1082.5549158654999 1082.55380993586 52.384 2 0.16053042990803756 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 90136 13391 RGVDLDQLLD True NCI_RA007_Epitope_Rep4 1142.59315184902 1142.5920499358601 58.681 2 0.16052740706927954 0.0007870916961826052 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000586686.6_1_19:1438424-1438889:+|nuORF', 'ENST00000591032.1_1_19:1438424-1439963:+|nuORF'] 75449 8188 NQIDHEVTV True PC9_epitope_Rep4 1053.50908787189 1053.50798993586 38.954 2 0.16052568011948515 0.0007870916961826052 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 134858 16636 YAAELIERV True PC9_epitope_Rep3 1062.57095985246 1062.5698699358602 69.125 2 0.1605213324887038 0.0007870916961826052 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 115295 17261 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54427496793 71.686 1 0.16051523219167063 0.0007870916961826052 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 11169 20991 DEHLQLISL True PC9_epitope_Rep1 1066.56587447202 1066.56476993586 85.567 2 0.16051433135468549 0.0007870916961826052 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 68428 21939 LTTLELLEV True PC9_epitope_Rep4 1029.5957776179698 1029.59468993586 92.599 2 0.16051339234368034 0.0007870916961826052 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 38721 19601 HHSSVIFIF True PC9_epitope_Rep2 1085.56581490237 1085.56470993586 80.779 2 0.1605126010268051 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 94076 15549 RVVDLLNQA True PC9_epitope_Rep5 1026.5821932425 1026.58108993586 64.819 2 0.16050662398583324 0.0007870916961826052 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 2444 4011 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 20.499 2 0.1605063383429745 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 116690 14801 TYITSVSRL True PC9_epitope_Rep1 1038.57095985246 1038.5698699358602 61.752 2 0.16050230961363557 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 135201 21985 YAVELFEGL True PC9_epitope_Rep4 1039.5226126777097 1039.52207496793 92.784 1 0.16050031598637932 0.0007870916961826052 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1'] 89711 11522 REYPNLVTI True NCI_RA007_Epitope_Rep5 1103.59750895347 1103.59640993586 50.97 2 0.16049957570356305 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110'] 52757 16729 KQM[Oxidation]EQISQFL True PC9_epitope_Rep5 1266.62782348602 1266.62672993586 69.354 2 0.16049956710381724 0.0007870916961826052 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 31795 7630 GELVSNGV True H1975_Epitope_Rep2 773.39193286133 773.3913849679301 34.303 1 0.16049588886398905 0.0007870916961826052 0.9438714419765777 ['ENST00000371478.2_1_5:132097291-132101152:-|nuORF', 'nc|ENSG00000164402|Q92599-3|SEPTIN8', 'nc|ENSG00000164402|Q92599-2|SEPTIN8', 'nc|ENSG00000164402|Q92599-4|SEPTIN8', 'ENSG00000164402|ENST00000378719|SEPTIN8'] 72105 14870 MRDPLNRVL True PC9_epitope_Rep1 1112.61244782496 1112.61134993586 62.016 2 0.16049197993987316 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000008838|O75448-2|MED24', 'ENSG00000008838|ENST00000394128|MED24'] 37573 18699 GYSEHFVEF True PC9_epitope_Rep1 1113.47672511445 1113.47562993586 76.715 2 0.1604915178599061 0.0007870916961826052 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 105846 20062 SVITQVFHV True PC9_epitope_Rep2 1028.5654805492 1028.5643899358602 82.574 2 0.1604902759895494 0.0007870916961826052 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 67510 16101 LTELPDWSY True H1975_Epitope_Rep3 1122.5233409537 1122.52277496793 67.39 1 0.1604817385994982 0.0007870916961826052 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 22248 10763 ETDNNIVVY True H1975_Epitope_Rep3 1065.4978544818498 1065.4967499358602 46.481 2 0.16047851343694744 0.0007870916961826052 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 95241 7720 SADETWDSA True NCI_RA007_Epitope_Rep4 980.37231961556 980.37177496793 36.368 1 0.1604751271244617 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 82992 17077 PYFNAPVYL True NCI_RA007_Epitope_Rep5 1082.5436824754597 1082.5425899358602 72.455 2 0.1604666551915939 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 103314 21551 SQVAVAGLLTV True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 87.933 2 0.16046642618630394 0.0007870916961826052 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 43344 19476 IHIPIIASV True PC9_epitope_Rep4 961.59605240149 961.59494993586 83.03 2 0.16046615252218516 0.0007870916961826052 0.9438714419765777 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF'] 94662 7476 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.61488490379 36.528 3 0.1604622461512779 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 109878 14946 THMTAIVGM True PC9_epitope_Rep3 959.4568587003499 959.45576993586 62.621 2 0.1604577270486982 0.0007870916961826052 0.9438714419765777 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 88397 21047 QYPVIIHLI True PC9_epitope_Rep5 1094.64881625034 1094.6477099358601 86.018 2 0.16045747143935063 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 108943 5480 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.43850993586 26.094 2 0.16044971751108794 0.0007870916961826052 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 139834 5381 YVDGVEVHN True NCI_RA007_Epitope_Rep5 1030.47197408718 1030.47086993586 27.386 2 0.16044789617685246 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 3495 9995 AGLQFPVGR True NCI_RA007_Epitope_Rep5 943.5239500903898 943.52284993586 45.087 2 0.16043939755678 0.0007870916961826052 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 96105 12123 SEDPTVPLP True H1975_Epitope_Rep2 953.4705771048499 953.46948993586 51.715 2 0.16043670017817033 0.0007870916961826052 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 97561 8241 SGVSLAALK True NCI_RA007_Epitope_Rep5 844.50181766348 844.50072993586 38.378 2 0.16043498927189526 0.0007870916961826052 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 274 13038 AAGSPVFL True H1975_Epitope_Rep2 760.41194002992 760.41139496793 55.27 1 0.16043044285961836 0.0007870916961826052 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 110586 7849 TISNDGATILK True NCI_RA007_Epitope_Rep2 1131.6135529404298 1131.61244993586 35.159 2 0.16042808989391366 0.0007870916961826052 0.9438714419765777 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7'] 2018 7447 AELATRALP True H1975_Epitope_Rep3 940.5341804209199 940.53308993586 33.624 2 0.16042557382674139 0.0007870916961826052 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 25543 4813 FEQPSRQV True H1975_Epitope_Rep3 989.4930438849298 989.49194993586 23.639 2 0.160416526628772 0.0007870916961826052 0.9438714419765777 ['ENSG00000087157|ENST00000262764|PGS1'] 9444 5747 AVVTQVNKV True PC9_epitope_Rep4 956.5654805492 956.56438993586 28.938 2 0.16041514124569034 0.0007870916961826052 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 112989 15616 TPSPLPTV True PC9_epitope_Rep5 810.4487194614601 810.44762993586 65.077 2 0.160409829266781 0.0007870916961826052 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 97955 8227 SHQTGVVAL True PC9_epitope_Rep2 910.4872302284999 910.48612993586 37.003 2 0.16040763169074637 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 42228 3666 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep2 1056.52738116876 1056.5262899358602 19.052 2 0.1604075327568292 0.0007870916961826052 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 41048 18813 HYILHNSFF True PC9_epitope_Rep5 1176.5716285587998 1176.5705299358601 77.377 2 0.1604064813022741 0.0007870916961826052 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 70113 13529 LYIVHPTMF True NCI_RA007_Epitope_Rep3 1119.57868808519 1119.57758993586 60.506 2 0.1603995340034362 0.0007870916961826052 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 17339 5742 EHDPVGQM[Oxidation]V True PC9_epitope_Rep5 1026.4440454676198 1026.44294993586 27.079 2 0.16039852802608728 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 135757 6563 YEMLANRTA True H1975_Epitope_Rep2 1067.5069796969099 1067.50588993586 30.155 2 0.16039851463911242 0.0007870916961826052 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B'] 73029 13008 NDEELNKLLGR True PC9_epitope_Rep6 1299.67827845531 1299.67663490379 61.617 3 0.16039804034803162 0.0007870916961826052 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4'] 109792 6365 THITAQTAV True PC9_epitope_Rep1 940.4977949122 940.49668993586 29.292 2 0.16039175091996302 0.0007870916961826052 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 140599 16820 YYLTPDGQRF True PC9_epitope_Rep5 1258.59823722946 1258.5971499358602 69.708 2 0.16038175130591686 0.0007870916961826052 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 75812 18260 NRDELELEL True PC9_epitope_Rep2 1129.5615173675699 1129.5604299358602 75.558 2 0.1603793277819546 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 125602 16566 VMAPRTVLL True PC9_epitope_Rep1 998.5946725024999 998.59356993586 68.544 2 0.1603765007182849 0.0007870916961826052 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 86851 12477 QRQEEAFAL True PC9_epitope_Rep2 1090.5407223533398 1090.5396299358601 53.303 2 0.1603711640839917 0.0007870916961826052 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57', 'nc|ENSG00000163214|Q6P158-2|DHX57', 'DHX57|p.S709Qfs*30|1|0.28|ENSG00000163214|chr2:38848308-38848308|A/-|frameshift_variant', 'nc|ENSG00000163214|Q6P158-3|DHX57', 'ENST00000479345.2_1_2:39084268-39090579:-|nuORF'] 90718 6573 RKPDGTVLL True NCI_RA007_Epitope_Rep4 997.59202965021 997.59092993586 31.901 2 0.1603684119195951 0.0007870916961826052 0.9438714419765777 ['ENSG00000066056|ENST00000372476|TIE1'] 7669 5129 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep3 990.4618036426001 990.46070993586 24.814 2 0.1603677090724095 0.0007870916961826052 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 120332 16616 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 68.919 2 0.1603603810732885 0.0007870916961826052 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 71199 17812 M[Oxidation]FLSFPTTK True PC9_epitope_Rep5 1086.54196860374 1086.5408699358602 73.533 2 0.1603580539071651 0.0007870916961826052 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 139690 9984 YTTDRVMTV True PC9_epitope_Rep4 1084.5222954078802 1084.52118993586 46.063 2 0.16035654177425704 0.0007870916961826052 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 89630 9252 RETETVFVP True NCI_RA007_Epitope_Rep5 1076.5502244078798 1076.54912993586 42.237 2 0.1603544721668066 0.0007870916961826052 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 113632 12949 TRDAGYGGLSL True PC9_epitope_Rep6 1108.5512870370399 1108.55018993586 61.358 2 0.16035439552982447 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 48786 9646 KEQPWVSVQP True H1975_Epitope_Rep2 1196.61897267404 1196.6178699358602 42.081 2 0.16034537744558652 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 76384 16044 NSLDAKEIYL True PC9_epitope_Rep4 1164.60265390356 1164.60154993586 69.647 2 0.160335620427026 0.0007870916961826052 0.9438714419765777 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10'] 126341 9951 VPKNSDPWAA True PC9_epitope_Rep3 1083.53490869691 1083.53380993586 43.232 2 0.16033139009578473 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 123467 6997 VIFTGGVGK True NCI_RA007_Epitope_Rep3 876.5069030439198 876.50580993586 34.633 2 0.16032788539744405 0.0007870916961826052 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 26772 18700 FLDPRPLTV True PC9_epitope_Rep5 1056.59678067748 1056.59568993586 76.947 2 0.16032512742638969 0.0007870916961826052 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 54258 17640 KYPHYFPVM True PC9_epitope_Rep1 1180.57393705792 1180.57282993586 72.646 2 0.1603211245086952 0.0007870916961826052 0.9438714419765777 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 39125 16499 HLDLGILYY True H1975_Epitope_Rep2 1105.58079626017 1105.5796899358602 68.682 2 0.1603189932479811 0.0007870916961826052 0.9438714419765777 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 90407 20760 RIMPEDIIINC True PC9_epitope_Rep3 1315.6628287153098 1315.6617299358602 85.123 2 0.16031829969764974 0.0007870916961826052 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 6872 13733 AQIGSYVHV True PC9_epitope_Rep5 972.50288029264 972.50178993586 57.847 2 0.16031402332397368 0.0007870916961826052 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 35453 6313 GTEITHAVVIK True NCI_RA007_Epitope_Rep1 1166.6659228664598 1166.66428490379 28.581 3 0.1603099952353623 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 85086 5760 QIQDSIVTK True NCI_RA007_Epitope_Rep5 1030.56587447202 1030.56476993586 28.843 2 0.16030957127399467 0.0007870916961826052 0.9438714419765777 ['ENSG00000196466|ENST00000430385|ZNF799', 'nc|ENSG00000196466|Q96GE5-2|ZNF799', 'ENSG00000180855|ENST00000301547|ZNF443'] 27010 19295 FLLGPRLVLA True PC9_epitope_Rep6 1097.6961007959299 1097.69500993586 86.865 2 0.16030705130483153 0.0007870916961826052 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 83326 21804 QALSPLLSV True PC9_epitope_Rep1 926.5436824754601 926.54258993586 88.687 2 0.16030527841518408 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 110981 8663 TLDDESLKY True H1975_Epitope_Rep3 1082.5131701928199 1082.51257496793 38.319 1 0.16030301501296504 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 128386 8582 VSDSGISTDY True H1975_Epitope_Rep2 1042.44548455582 1042.44497496793 37.964 1 0.16030049645841002 0.0007870916961826052 0.9438714419765777 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 49013 7760 KFIDTTSKF True NCI_RA007_Epitope_Rep4 1085.57571087973 1085.57460993586 36.528 2 0.16029880740728633 0.0007870916961826052 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 77358 22541 NYLLYVSNF True PC9_epitope_Rep5 1131.5600608155898 1131.5589699358602 91.709 2 0.16029695534350405 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R'] 97716 9787 SHEEVVQTL True PC9_epitope_Rep1 1040.5138388991597 1040.51274993586 42.507 2 0.16029452992395313 0.0007870916961826052 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 14361 8979 DTEENKLIY True H1975_Epitope_Rep2 1123.5397192938299 1123.5386299358602 39.492 2 0.16029422898640094 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP', 'ENSG00000102931|ENST00000219204|ARL2BP'] 117137 18454 TYSPALNKMF True PC9_epitope_Rep5 1170.5743309807401 1170.5732299358601 76.004 2 0.16028675426499525 0.0007870916961826052 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 89742 5357 REYQLNDSAA True NCI_RA007_Epitope_Rep3 1165.53636524889 1165.53526993586 28.08 2 0.16028593148635975 0.0007870916961826052 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1'] 86974 15168 QRVPLSVQL True PC9_epitope_Rep4 1038.61857875122 1038.61748993586 66.27 2 0.16028484403241872 0.0007870916961826052 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 72123 18173 MREDVAEGLTL True PC9_epitope_Rep1 1232.6070876609997 1232.6059899358602 74.692 2 0.16028483535399 0.0007870916961826052 0.9438714419765777 ['ENST00000579248.5_2_18:47017953-47018809:-|nuORF'] 83020 11059 PYKVTQDEL True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 47.427 2 0.1602837132818075 0.0007870916961826052 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 26990 18840 FLLDPVKGERL True PC9_epitope_Rep3 1285.73942215989 1285.73776490379 77.69 3 0.16027607954585224 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 131929 18124 VYEYVVERF True PC9_epitope_Rep2 1202.5971746002995 1202.5960699358602 75.016 2 0.160274314980332 0.0007870916961826052 0.9438714419765777 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 4641 16595 ALATLIHQV True PC9_epitope_Rep1 964.5705659296401 964.56946993586 68.657 2 0.16027268973004727 0.0007870916961826052 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 123347 15866 VHYGEVVQL True PC9_epitope_Rep3 1042.54474510462 1042.54364993586 66.179 2 0.16026761732618505 0.0007870916961826052 0.9438714419765777 ['ENSG00000127080|ENST00000287996|IPPK'] 9549 20689 AYALLLQHL True PC9_epitope_Rep1 1040.60186605792 1040.6007699358602 84.404 2 0.16026414598543542 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6'] 17796 19021 EHVPVVIGL True PC9_epitope_Rep5 961.5596668927699 961.55856993586 78.19 2 0.16026150510531742 0.0007870916961826052 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6', 'SOCS6|p.E434Gfs*2|1|0.26|ENSG00000170677|chr18:70325969-70325979|AGCACTCAAAT/-|frameshift_variant'] 88257 18758 QYESKVFYL True PC9_epitope_Rep5 1175.5862755634298 1175.5851699358602 77.163 2 0.1602575041633144 0.0007870916961826052 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 108414 18600 TEEDVLNIFP True H1975_Epitope_Rep2 1175.5710194221099 1175.56992993586 77.192 2 0.1602561114513778 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000574210.5_1_17:2597327-2598221:-|nuORF'] 44552 15391 IPAYLAETL True H1975_Epitope_Rep3 989.5433481222899 989.54279496793 64.612 1 0.16025533581783294 0.0007870916961826052 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 139683 11267 YTTDRVMTV True PC9_epitope_Rep1 1084.5222954078802 1084.52118993586 48.219 2 0.16024904067472648 0.0007870916961826052 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 139434 15162 YTELLAQVY True H1975_Epitope_Rep2 1098.5597264624198 1098.5586299358602 63.475 2 0.16024739677435892 0.0007870916961826052 0.9438714419765777 ['ENST00000487921.5_1_17:56769962-56783250:+|nuORF', 'ENST00000475762.5_1_17:56772326-56801433:+|nuORF', 'ENSG00000108384|ENST00000337432|RAD51C', 'ENST00000487525.5_1_17:56772519-56783250:+|nuORF'] 117020 15186 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.5233099358602 66.337 2 0.16024738982259576 0.0007870916961826052 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 138240 9068 YQTEKGITV True PC9_epitope_Rep5 1037.5393253710097 1037.53822993586 39.825 2 0.16024296751519734 0.0007870916961826052 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 9009 16498 AVIDVGINRV True PC9_epitope_Rep3 1054.61349337078 1054.6123899358602 68.596 2 0.16023180931362038 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 97667 19952 SHDEVFVVL True PC9_epitope_Rep5 1043.52876068731 1043.52766993586 81.798 2 0.16022772862898405 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 105750 19191 SVIDHIHLI True PC9_epitope_Rep1 1045.59202965021 1045.59092993586 78.613 2 0.1602211602568483 0.0007870916961826052 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 27189 17382 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55750993586 72.154 2 0.16021830497125422 0.0007870916961826052 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 18280 6623 EITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep5 1176.6060254122801 1176.6049299358601 32.138 2 0.16021176452678607 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 46424 22794 ITLEDLEQL True PC9_epitope_Rep1 1072.5652057656798 1072.5641099358602 92.488 2 0.16020452444729644 0.0007870916961826052 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 63639 20229 LPNLQTVTV True PC9_epitope_Rep1 983.56514619603 983.56404993586 82.64 2 0.1602041806991385 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 13372 7083 DNEFGYSNR True NCI_RA007_Epitope_Rep1 1100.4523012717598 1100.45120993586 31.545 2 0.1601987354203734 0.0007870916961826052 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'chr12:6537216-6538101|251|78.77|0.54|7.19|+|1|GAPDH,GAPDH|1'] 65056 15120 LSDLFSDDY True H1975_Epitope_Rep1 1073.45532096353 1073.45477496793 63.415 1 0.16019814093682636 0.0007870916961826052 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 90458 15327 RISLPLPNF True NCI_RA007_Epitope_Rep5 1055.61276509479 1055.6116699358602 65.655 2 0.16019681826008866 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 85763 19158 QLVRDLLEV True PC9_epitope_Rep4 1083.62880908175 1083.6277099358601 81.788 2 0.16019649969889646 0.0007870916961826052 0.9438714419765777 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 103317 15548 SQVDRLVAL True PC9_epitope_Rep2 999.5712942056298 999.57018993586 65.079 2 0.160186271807663 0.0007870916961826052 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 91582 13421 RPAQPTLWTA True PC9_epitope_Rep2 1139.60874234351 1139.60764993586 56.907 2 0.16018228433956153 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 117142 13228 TYSPALNKM[Oxidation]F True PC9_epitope_Rep1 1186.5692459807399 1186.5681499358602 55.747 2 0.1601820549736643 0.0007870916961826052 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 72519 22466 M[Oxidation]VDGTLLLL True PC9_epitope_Rep2 989.5467196310099 989.54562993586 91.904 2 0.16017762935621602 0.0007870916961826052 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 26511 16329 FITDPVVL True H1975_Epitope_Rep2 902.51131971802 902.51077496793 68.027 1 0.16016934988525772 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000418838.1_1_X:40219448-40219874:-|nuORF', 'ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 43037 8339 IGGIGTVPVGR True NCI_RA007_Epitope_Rep5 1024.6029286870798 1024.60182993586 38.75 2 0.16016465343313327 0.0007870916961826052 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 138391 13269 YRDPNTIETL True PC9_epitope_Rep1 1220.60371653272 1220.60260993586 55.904 2 0.16016178127826558 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 45213 17504 IRKPYIWEY True PC9_epitope_Rep3 1266.67609362734 1266.6749899358601 72.508 2 0.16015958103874597 0.0007870916961826052 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 102052 8248 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 37.083 2 0.16014749180836169 0.0007870916961826052 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 127579 10711 VQWKVDNAL True NCI_RA007_Epitope_Rep4 1071.5712942056298 1071.57018993586 48.046 2 0.16013932157372643 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000211592|P01834|IGKC'] 75133 12747 NMYGKVVTV True PC9_epitope_Rep5 1009.52665251233 1009.52554993586 54.038 2 0.16012899487778404 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 29355 21432 FVEETVYLL True PC9_epitope_Rep4 1111.58012755383 1111.57902993586 90.615 2 0.16012824057796973 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 33337 20214 GLDSQFVEV True PC9_epitope_Rep3 992.4814761417199 992.48036993586 83.011 2 0.16012600006948494 0.0007870916961826052 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 96810 13920 SESDYIVMP True H1975_Epitope_Rep2 1039.4532127885498 1039.4526749679299 58.691 1 0.16012563386421455 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'SCARB1|p.G128S|1|0.24|ENSG00000073060|chr12:124815017-124815017|C/T|missense_variant', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1'] 25368 7244 FEIATKEDP True H1975_Epitope_Rep1 1048.5076908895599 1048.5065899358601 32.874 2 0.16011414127244766 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 27633 20471 FQAEIAQLM True PC9_epitope_Rep4 1049.52156713189 1049.52046993586 86.888 2 0.16011388526635462 0.0007870916961826052 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 104799 8294 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.53367496793 36.854 1 0.1601137691670733 0.0007870916961826052 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 26959 10437 FLIVAHDDGR True PC9_epitope_Rep5 1141.58800689893 1141.58635490379 45.133 3 0.16011204449443647 0.0007870916961826052 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 127546 20061 VQVPVPVTV True PC9_epitope_Rep3 936.5644179200399 936.56332993586 82.414 2 0.16010541329755903 0.0007870916961826052 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 107765 21422 TAMDVVYAL True PC9_epitope_Rep2 981.4841189940099 981.48302993586 87.872 2 0.16008937529552728 0.0007870916961826052 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 113933 14587 TRISNDLEL True PC9_epitope_Rep5 1059.5560380643099 1059.5549499358601 61.11 2 0.1600859473652894 0.0007870916961826052 0.9438714419765777 ['ENSG00000007047|ENST00000262891|MARK4'] 25985 14503 FGYQFTQQGPR True PC9_epitope_Rep5 1327.6309343400699 1327.62982993586 60.786 2 0.16007898992234673 0.0007870916961826052 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 72243 13536 MRYVASYLL True NCI_RA007_Epitope_Rep4 1114.5845017416198 1114.5834099358601 59.273 2 0.16007811274342093 0.0007870916961826052 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 74111 12828 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 54.218 2 0.16007741360006078 0.0007870916961826052 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 28990 18192 FTHSQFIVV True PC9_epitope_Rep5 1076.5654805492 1076.5643899358602 74.985 2 0.16007315887780263 0.0007870916961826052 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 9662 21943 AYGNVFSAF True PC9_epitope_Rep1 974.4497820906199 974.44868993586 89.222 2 0.1600730003522394 0.0007870916961826052 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 24058 11703 EYQIKTNQL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 49.89 2 0.160072247983527 0.0007870916961826052 0.9438714419765777 ['ENST00000602574.5_1_10:22607528-22607842:+|nuORF', 'ENST00000602395.1_1_10:22607528-22615407:+|nuORF', 'ENST00000496071.5_1_10:22607528-22608924:+|nuORF', 'ENST00000463409.6_1_10:22605382-22615407:+|nuORF', 'ENSG00000148444|ENST00000376836|COMMD3'] 54418 16118 KYSNMEQSLF True PC9_epitope_Rep2 1245.5699738762899 1245.5688699358602 67.256 2 0.1600706720751549 0.0007870916961826052 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 11841 15312 DHMRFISEL True PC9_epitope_Rep6 1146.54917886206 1146.54754490379 71.017 3 0.1600594972401938 0.0007870916961826052 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 52327 10123 KPANVFITA True PC9_epitope_Rep6 959.54401682863 959.54290993586 49.552 2 0.16005857068777532 0.0007870916961826052 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 113119 11786 TQAPGNPVL True PC9_epitope_Rep2 895.4763311916299 895.47578496793 50.667 1 0.16005553669113665 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 59881 7892 LHHDDPEVL True PC9_epitope_Rep3 1073.51417325233 1073.5130699358601 35.34 2 0.16005523301091443 0.0007870916961826052 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 25600 10547 FETAVAPNV True H1975_Epitope_Rep3 946.4759968384599 946.47488993586 45.635 2 0.16005409447159227 0.0007870916961826052 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 21834 11666 ESDVGVVVY True H1975_Epitope_Rep2 965.47057710485 965.47002496793 49.945 1 0.16005306040551726 0.0007870916961826052 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 52750 18793 KQMEQISQFL True PC9_epitope_Rep2 1250.6329084860197 1250.63180993586 77.657 2 0.16005064451240683 0.0007870916961826052 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENSG00000144834|ENST00000478951|TAGLN3'] 48003 9262 KAINQGGLTSV True PC9_epitope_Rep5 1086.6033226099 1086.6022299358601 40.575 2 0.1600375854828242 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 84588 8831 QHDPETSVL True PC9_epitope_Rep3 1024.48253877088 1024.4814499358602 38.918 2 0.16003473892998768 0.0007870916961826052 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 20431 7407 EPPVIQNPEYK True H1975_Epitope_Rep1 1312.66631678928 1312.66520993586 33.494 2 0.16003095169504788 0.0007870916961826052 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR'] 75470 15751 NQIKEFIYA True PC9_epitope_Rep2 1124.5866099165999 1124.58550993586 65.853 2 0.16002551603813792 0.0007870916961826052 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 96365 6518 SEGFDTYR True NCI_RA007_Epitope_Rep2 973.4141248578899 973.41302993586 29.963 2 0.16002367560859485 0.0007870916961826052 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'ENST00000397222.2_1_X:45918520-45918886:-|nuORF'] 47935 13470 IYYTGKYQSL True PC9_epitope_Rep2 1234.6233893481399 1234.6222899358602 57.092 2 0.16002034879563343 0.0007870916961826052 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 68803 7038 LVDQRVAEY True H1975_Epitope_Rep3 1091.56112344475 1091.56002993586 32.036 2 0.16001530158220378 0.0007870916961826052 0.9438714419765777 ['ENSG00000143157|ENST00000367876|POGK'] 12648 9260 DLEIATYR True H1975_Epitope_Rep3 979.4974605590301 979.49636993586 40.61 2 0.16001156359856678 0.0007870916961826052 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 25195 9058 FEADPPGQV True H1975_Epitope_Rep2 958.4396113297399 958.43850993586 39.795 2 0.1600096976760481 0.0007870916961826052 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 68702 13613 LVDDPLEY True H1975_Epitope_Rep2 962.4596780679799 962.45912496793 57.5 1 0.16000906276140106 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 120282 16499 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 68.462 2 0.16000756927980142 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 47881 9338 IYTSSVNRL True PC9_epitope_Rep2 1051.56620882519 1051.5651099358602 41.257 2 0.16000202390727203 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 8125 9357 ATETQPIVY True H1975_Epitope_Rep1 1020.5127762699997 1020.51166993586 40.899 2 0.1599984306884104 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 138594 10700 YRQKQVVIL True PC9_epitope_Rep1 1145.6920780446499 1145.6909899358602 46.048 2 0.15999756245163646 0.0007870916961826052 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 110226 11376 TIEIITDR True PC9_epitope_Rep2 959.52876068731 959.52766993586 49.078 2 0.1599900251197422 0.0007870916961826052 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 123114 18541 VHDEGVWAL True PC9_epitope_Rep1 1024.4977949121999 1024.49668993586 76.108 2 0.159988869617845 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 136370 11372 YHDIAQQAF True PC9_epitope_Rep4 1091.50360856863 1091.5025099358602 51.516 2 0.15998717301037685 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 138834 8715 YSDKYGLGY True H1975_Epitope_Rep3 1064.48147614172 1064.4803699358602 38.523 2 0.1599864947938923 0.0007870916961826052 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 132219 9881 VYKPAQNSW True PC9_epitope_Rep1 1091.5399940773498 1091.5388899358602 42.865 2 0.1599729556228728 0.0007870916961826052 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 103409 20756 SQYEEQFVTL True PC9_epitope_Rep5 1242.5768330785397 1242.5757299358602 84.89 2 0.15996988909457843 0.0007870916961826052 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 58914 9179 LFVGGIKED True NCI_RA007_Epitope_Rep4 976.5229470308799 976.52184993586 42.147 2 0.15996402779724914 0.0007870916961826052 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 7433 9293 ASDDFDQASY True H1975_Epitope_Rep2 1117.4199980839699 1117.41947496793 40.704 1 0.15995616873619373 0.0007870916961826052 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 9826 18847 AYLKGTVLF True PC9_epitope_Rep2 1010.5800679841799 1010.57896993586 77.863 2 0.15994932232470976 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 123116 17483 VHDEGVWAL True PC9_epitope_Rep2 1024.4977949121999 1024.49668993586 72.504 2 0.1599458044268792 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 47523 15936 IYLPYLHEW True NCI_RA007_Epitope_Rep3 1232.62299542532 1232.62188993586 70.346 2 0.1599407242755727 0.0007870916961826052 0.9438714419765777 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 53088 7707 KSDTQNLLY True H1975_Epitope_Rep2 1080.54513902744 1080.5440499358601 34.599 2 0.1599392510817478 0.0007870916961826052 0.9438714419765777 ['ENSG00000012232|ENST00000220562|EXTL3'] 44245 15875 ILTERGYSF True PC9_epitope_Rep1 1084.55530978832 1084.5542099358602 65.872 2 0.15993391943331825 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 70106 15681 LYIVEPLKF True NCI_RA007_Epitope_Rep5 1120.6532329244399 1120.65212993586 67.032 2 0.15992674803976453 0.0007870916961826052 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 23648 20574 EYGKFFVTL True PC9_epitope_Rep2 1102.5698972233 1102.5688099358601 84.57 2 0.15992542843361313 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 76549 12780 NTDPSIVMTY True H1975_Epitope_Rep3 1139.51687567427 1139.5157699358601 54.374 2 0.15992443697838143 0.0007870916961826052 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 36052 9845 GVDVTGPHLY True H1975_Epitope_Rep3 1056.52400966004 1056.52290993586 42.899 2 0.15992303057430762 0.0007870916961826052 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 57231 5353 LEFEHQRAP True NCI_RA007_Epitope_Rep3 1125.55670677065 1125.5550749037902 28.062 3 0.15992174900062667 0.0007870916961826052 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 119134 6143 VEILANDQGNR True PC9_epitope_Rep6 1227.6207635791898 1227.6196699358602 32.053 2 0.1599172517012247 0.0007870916961826052 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 25475 10553 FENPIIKSC True H1975_Epitope_Rep2 1049.52156713189 1049.52046993586 45.612 2 0.15991568728926192 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 84309 19493 QFIDKPVCF True PC9_epitope_Rep1 1095.5423025764699 1095.54120993586 79.798 2 0.15991037850455614 0.0007870916961826052 0.9438714419765777 ['ENSG00000106399|ENST00000223129|RPA3', 'ENST00000462723.1_1_7:7678661-7680049:-|nuORF'] 76864 21972 NVIESFTEL True PC9_epitope_Rep5 1050.5233409537 1050.5222499358601 89.548 2 0.15990927760485968 0.0007870916961826052 0.9438714419765777 ['RAB40A|p.I163V|1|0.09|ENSG00000172476|chrX:103500270-103500270|T/C|missense_variant', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENSG00000197562|ENST00000248139|RAB40C'] 21231 13026 ERFSTSQVL True PC9_epitope_Rep5 1065.54547338061 1065.54436993586 55.109 2 0.15988930810800275 0.0007870916961826052 0.9438714419765777 ['ENSG00000181481|ENST00000328381|RNF135'] 62775 15997 LMDHTIPEV True PC9_epitope_Rep1 1053.51648175145 1053.5153899358602 66.343 2 0.15988682518517097 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 24136 5156 EYSKQMQRF True PC9_epitope_Rep6 1215.57064258263 1215.56899490379 27.567 3 0.15988468552155566 0.0007870916961826052 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 52158 12636 KLVTTVTEI True PC9_epitope_Rep4 1002.59611197114 1002.59500993586 56.444 2 0.1598829104321794 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 39489 7286 HPADSVVSV True PC9_epitope_Rep4 909.4555957470501 909.45448993586 35.34 2 0.15987043843521476 0.0007870916961826052 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 67175 9220 LTDFQKAVY True H1975_Epitope_Rep3 1083.5600608155898 1083.5589699358602 40.457 2 0.1598672682610795 0.0007870916961826052 0.9438714419765777 ['ENSG00000182150|ENST00000653738|ERCC6L2', 'nc|ENSG00000182150|Q5T890-2|ERCC6L2'] 70617 6164 M[Oxidation]ADKNIQYY True H1975_Epitope_Rep3 1160.51721040788 1160.5161099358602 28.722 2 0.159865259664541 0.0007870916961826052 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30', 'ENST00000604751.1_1_9:115618996-115637523:+|nuORF'] 74055 8746 NHSNQFTQL True PC9_epitope_Rep2 1087.50467119779 1087.50356993586 39.0 2 0.15986131673044335 0.0007870916961826052 0.9438714419765777 ['ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENSG00000132024|ENST00000318003|CC2D1A'] 138369 13431 YRDGTGVVEF True PC9_epitope_Rep4 1141.5403880001697 1141.53928993586 59.562 2 0.1598573925483371 0.0007870916961826052 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1'] 75884 18546 NRDPILVSL True PC9_epitope_Rep5 1025.58694426977 1025.58584993586 76.36 2 0.15985537413873716 0.0007870916961826052 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 76189 16939 NRTELPLTL True PC9_epitope_Rep4 1055.59750895347 1055.59640993586 73.146 2 0.1598419685809218 0.0007870916961826052 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 60180 11276 LHYPSTTAL True PC9_epitope_Rep6 1001.51819600361 1001.51708993586 54.386 2 0.1598417059729835 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 97865 19206 SHLDYDITL True PC9_epitope_Rep1 1075.5185899264302 1075.51807496793 78.671 1 0.15983531720023442 0.0007870916961826052 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 8928 9511 AVGLVLPAK True NCI_RA007_Epitope_Rep2 866.5589386167799 866.55784993586 41.61 2 0.15983274113310547 0.0007870916961826052 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 29669 11603 FVNDIFER True NCI_RA007_Epitope_Rep2 1038.5134449763398 1038.5123499358601 49.724 2 0.15983175109966585 0.0007870916961826052 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 65333 7146 LSELKPM[Oxidation]SY True H1975_Epitope_Rep3 1082.53179784286 1082.5307099358602 32.459 2 0.15983123830440313 0.0007870916961826052 0.9438714419765777 ['ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 8747 13241 AVDSLVPIGR True PC9_epitope_Rep6 1025.58694426977 1025.58584993586 62.58 2 0.15982873575771386 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 103633 18931 SRDLFTYTV True PC9_epitope_Rep5 1100.55022440788 1100.54912993586 77.841 2 0.1598275420822235 0.0007870916961826052 0.9438714419765777 ['ENSG00000121281|ENST00000673801|ADCY7'] 103944 17229 SRPPLLGF True PC9_epitope_Rep4 885.50723739709 885.50614993586 74.279 2 0.1598253055641537 0.0007870916961826052 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 69831 8949 LYADVGGKQF True NCI_RA007_Epitope_Rep3 1096.55530978832 1096.5542099358602 42.291 2 0.15981791015875513 0.0007870916961826052 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 29156 17022 FTVPDTREL True PC9_epitope_Rep1 1076.55022440788 1076.54912993586 70.299 2 0.1598147216236728 0.0007870916961826052 0.9438714419765777 ['ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000474676.1_1_9:126331853-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-5|DENND1A'] 3489 10446 AGLQFPVGR True NCI_RA007_Epitope_Rep1 943.5239500903898 943.52284993586 44.615 2 0.15981382038477526 0.0007870916961826052 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 4956 17909 ALIDRMVNL True PC9_epitope_Rep6 1043.57975071435 1043.57864993586 81.511 2 0.15981151092616183 0.0007870916961826052 0.9438714419765777 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 2727 8454 AETSPAPIP True H1975_Epitope_Rep2 881.44944773745 881.4488949679301 37.471 1 0.15980691238005545 0.0007870916961826052 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 108434 5514 TEEKFIVKA True H1975_Epitope_Rep1 1063.5913609438699 1063.59026993586 26.272 2 0.1598048868461453 0.0007870916961826052 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 100429 11479 SLPDLTTPLK True NCI_RA007_Epitope_Rep4 1083.61757569171 1083.61646993586 51.087 2 0.1598037525423558 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 47182 19907 IYADLNQNDF True PC9_epitope_Rep5 1211.5458673034302 1211.5447699358601 81.626 2 0.15980366531148377 0.0007870916961826052 0.9438714419765777 ['ENSG00000064763|ENST00000536681|FAR2'] 93609 11650 RSYWKEVLL True H1975_Epitope_Rep2 1192.6604435631998 1192.65934993586 49.881 2 0.15980164950292824 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7', 'ENST00000513075.1_1_17:47900608-47903534:+|nuORF', 'ENST00000503635.1_1_17:47903366-47904308:+|nuORF'] 103612 16175 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.60010993586 67.356 2 0.1597951331425909 0.0007870916961826052 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 84973 9019 QIDPSIQRV True PC9_epitope_Rep6 1054.57710786206 1054.5760099358602 44.725 2 0.15979381561679806 0.0007870916961826052 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant'] 84828 11623 QHLQATGVSL True PC9_epitope_Rep1 1052.56145779792 1052.56036993586 49.586 2 0.1597862802672045 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 52873 9447 KRFDDKYTL True PC9_epitope_Rep1 1184.6189726740397 1184.61733490379 41.194 3 0.1597857356396482 0.0007870916961826052 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 75036 13631 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 57.57 2 0.1597815700890879 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 116377 8995 TVYSGEEKL True PC9_epitope_Rep1 1024.5076908895599 1024.5065899358601 39.447 2 0.15978149758885463 0.0007870916961826052 0.9438714419765777 ['ENSG00000166224|ENST00000373202|SGPL1'] 9249 6212 AVQQPFINK True NCI_RA007_Epitope_Rep3 1043.5763795860698 1043.5752899358602 31.442 2 0.15977774471666076 0.0007870916961826052 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 28092 19751 FREDMPSIL True PC9_epitope_Rep1 1106.5430308524599 1106.54192993586 80.799 2 0.1597741257466691 0.0007870916961826052 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 47970 5339 KAFNQGKIFK True NCI_RA007_Epitope_Rep2 1179.67642798051 1179.67477490379 25.387 3 0.15977197409848234 0.0007870916961826052 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 136549 14732 YHSEVPVSL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 61.804 2 0.15976561011444643 0.0007870916961826052 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 86643 7418 QRFADTHSL True PC9_epitope_Rep5 1073.52540664237 1073.5243099358602 33.489 2 0.15975787673156325 0.0007870916961826052 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 57033 11500 LEEETENIIAA True H1975_Epitope_Rep2 1230.59796244594 1230.59686993586 49.292 2 0.15974359935419788 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000071539|Q15645-2|TRIP13', 'ENST00000512024.5_1_5:893053-908577:+|nuORF', 'ENSG00000071539|ENST00000166345|TRIP13'] 21155 13749 ERDVSLTSL True PC9_epitope_Rep2 1018.5294889633 1018.52838993586 58.172 2 0.15973710857336923 0.0007870916961826052 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 106167 11342 SVPEFPLSPPK True NCI_RA007_Epitope_Rep3 1196.6441247927198 1196.64302993586 51.728 2 0.15973527909567706 0.0007870916961826052 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 17514 12467 EHINEGETAML True PC9_epitope_Rep1 1242.55505208814 1242.5539499358601 52.82 2 0.15973248230348497 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 53861 19692 KYGVTFYNF True PC9_epitope_Rep2 1137.54949613189 1137.54838993586 81.131 2 0.15972946194343224 0.0007870916961826052 0.9438714419765777 ['ENST00000510737.1_1_4:120160395-120160458:+|nuORF'] 84205 9207 QETLTNISA True H1975_Epitope_Rep3 975.48728979815 975.48674496793 40.408 1 0.15972376162933413 0.0007870916961826052 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF', 'nc|ENSG00000167657|O43293-2|DAPK3'] 70783 8645 MEEMHQVAIAA True H1975_Epitope_Rep3 1228.5580292936002 1228.5569299358601 38.25 2 0.15972331261574035 0.0007870916961826052 0.9438714419765777 ['ENST00000449421.6_1_17:73205928-73222855:+|nuORF', 'ENST00000583948.5_1_17:73201841-73222120:+|nuORF', 'nc|ENSG00000125450|Q9BW27-3|NUP85', 'KIAA0195-NUP85|1|fusion', 'ENSG00000125450|ENST00000245544|NUP85', 'ENST00000583548.1_1_17:73204633-73212422:+|nuORF', 'ENST00000577208.5_1_17:73201841-73212422:+|nuORF', 'NUP85|p.D178Qfs*17|1|0.12|ENSG00000125450|chr17:75218240-75218289|GGACAGTTTGTCGGCAGATGTTCTGGGCAGTGAGAATCCAAGCAAACATG/-|frameshift_variant'] 70157 22132 LYLENIDEF True PC9_epitope_Rep5 1154.54955570154 1154.5484499358602 90.165 2 0.1597156329527106 0.0007870916961826052 0.9438714419765777 ['ENSG00000077514|ENST00000263681|POLD3', 'ENST00000532497.5_1_11:74303703-74322559:+|nuORF', 'ENST00000532784.5_1_11:74303703-74306426:+|nuORF', 'ENST00000527458.5_1_11:74303652-74303820:+|nuORF'] 31521 2623 GEFEKKYVA True NCI_RA007_Epitope_Rep3 1069.5444107514497 1069.5433099358602 14.779 2 0.1597130299152565 0.0007870916961826052 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 132015 14539 VYGSFASKL True PC9_epitope_Rep1 970.5123823471799 970.51128993586 60.748 2 0.15971050678296259 0.0007870916961826052 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 108334 3585 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 18.693 2 0.15970781583265284 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 91875 12363 RPNSLVGITSA True PC9_epitope_Rep1 1113.61422164677 1113.6131299358601 52.413 2 0.15970165399496067 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 67303 11565 LTDPIQGTEY True H1975_Epitope_Rep3 1135.53971929383 1135.5386299358602 49.613 2 0.15969938426069277 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 4025 13720 AHLDATTVL True PC9_epitope_Rep3 939.5025459394701 939.50144993586 57.856 2 0.15969491044046288 0.0007870916961826052 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 77538 20632 NYQVQFVTL True PC9_epitope_Rep4 1110.57095985246 1110.5698699358602 87.518 2 0.1596845628226097 0.0007870916961826052 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 99609 20048 SLFPGKLEVV True PC9_epitope_Rep2 1087.62774645259 1087.62664993586 82.52 2 0.1596840716598653 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 4169 5458 AIAQAESLRYK True NCI_RA007_Epitope_Rep3 1248.6826355597598 1248.68098490379 28.479 3 0.1596824562141029 0.0007870916961826052 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 10888 9797 DAQSAPLRV True PC9_epitope_Rep3 955.50869394907 955.50758993586 42.639 2 0.15967722475051702 0.0007870916961826052 0.9438714419765777 ['CON__P02754'] 43906 12101 ILDQKINEV True PC9_epitope_Rep1 1070.5971746003 1070.5960699358602 51.406 2 0.15967587118768545 0.0007870916961826052 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 54213 16600 KYPENFFLL True NCI_RA007_Epitope_Rep4 1169.61209638845 1169.61098993586 71.971 2 0.15966538777273262 0.0007870916961826052 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 71382 11139 MIDPSGVSY True H1975_Epitope_Rep3 967.4320834211501 967.43153496793 47.942 1 0.15965874164708369 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 22140 8721 ESYSVYVYK True H1975_Epitope_Rep1 1136.5389910178399 1136.53847496793 38.473 1 0.15965873007879827 0.0007870916961826052 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 39899 19532 HQLALISQL True PC9_epitope_Rep3 1021.59202965021 1021.59092993586 80.361 2 0.15965600202862545 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 88013 7538 QVSPEAGVQKV True PC9_epitope_Rep3 1140.6138872935999 1140.61278993586 33.995 2 0.1596445517781138 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 132105 17669 VYINEVRVI True PC9_epitope_Rep5 1103.6338944621898 1103.63278993586 72.977 2 0.1596437991878542 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 8014 11611 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.4858499358602 49.729 2 0.15962690047221337 0.0007870916961826052 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 138701 15761 YRVFTTQEL True PC9_epitope_Rep2 1155.5924235730297 1155.5913299358601 65.891 2 0.1596156950398638 0.0007870916961826052 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 41041 17170 HYILHNSFF True PC9_epitope_Rep2 1176.5716285587998 1176.5705299358601 71.305 2 0.15961456534343668 0.0007870916961826052 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 76892 6352 NVKVDPEIQ True H1975_Epitope_Rep3 1040.5502244078798 1040.54912993586 29.424 2 0.15960465807348972 0.0007870916961826052 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.L163P|1|0.23|ENSG00000172867|chr12:52651655-52651655|A/G|missense_variant'] 1766 10926 AEHGIFLPP True H1975_Epitope_Rep2 979.51271670035 979.51160993586 47.06 2 0.15960275016264414 0.0007870916961826052 0.9438714419765777 ['ENSG00000159079|ENST00000290155|CFAP298'] 11298 10649 DETEFYLGK True NCI_RA007_Epitope_Rep5 1100.50260550912 1100.5015099358602 47.598 2 0.15958909192896384 0.0007870916961826052 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF'] 9470 14600 AVYDFFIGR True NCI_RA007_Epitope_Rep3 1086.5498304850598 1086.5487299358601 64.77 2 0.15958360989863804 0.0007870916961826052 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 103898 6810 SRLSSTSSL True PC9_epitope_Rep1 936.4876241513201 936.48652993586 31.0 2 0.15958235176639232 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 1561 5258 AEFAERSVA True NCI_RA007_Epitope_Rep3 978.4770594676199 978.47596993586 27.687 2 0.15957507952262984 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM3|p.K249N|1|0.07|ENSG00000143549|chr1:154170428-154170428|C/G|missense_variant', 'ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 2520 8161 AEQSEIIQA True H1975_Epitope_Rep3 987.4872897981498 987.48674496793 36.37 1 0.15957131815842496 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63', 'nc|ENSG00000182923|Q96MT8-2|CEP63', 'ENSG00000182923|ENST00000675561|CEP63'] 138577 19838 YRPPELLL True PC9_epitope_Rep1 999.5753169569099 999.57420993586 81.123 2 0.1595654247704076 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 119622 7552 VESAYEVIK True H1975_Epitope_Rep3 1036.5440763982797 1036.5429699358601 34.03 2 0.15956458497568088 0.0007870916961826052 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 35431 7050 GTDSASGMDY True H1975_Epitope_Rep3 1002.3600406797 1002.35947496793 32.083 1 0.15955882975553715 0.0007870916961826052 0.9438714419765777 ['ENSG00000109861|ENST00000227266|CTSC', 'ENST00000533897.1_1_11:88027176-88029469:-|nuORF'] 12052 7820 DIDSPPITAR True H1975_Epitope_Rep3 1083.5560380643099 1083.5549499358601 35.058 2 0.1595536633208076 0.0007870916961826052 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 128312 9431 VSDEAGLDY True H1975_Epitope_Rep2 967.41345615155 967.4129049679301 41.244 1 0.1595518488348743 0.0007870916961826052 0.9438714419765777 ['ENSG00000182253|ENST00000336292|SYNM', 'nc|ENSG00000182253|O15061-2|SYNM'] 8484 9132 ATVAVPLVGK True NCI_RA007_Epitope_Rep4 953.5909670210499 953.58986993586 41.966 2 0.1595303387916999 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 139250 9786 YTDAALNY True H1975_Epitope_Rep2 929.41306222873 929.4125149679301 42.629 1 0.1595272632280166 0.0007870916961826052 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000497425.1_1_2:166736340-166740450:-|nuORF'] 45162 19814 IRDNFVIVY True PC9_epitope_Rep3 1137.61824439805 1137.6171499358602 81.447 2 0.1595238935065192 0.0007870916961826052 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 27751 21302 FQDSVFNDL True PC9_epitope_Rep2 1083.48728979815 1083.48618993586 87.402 2 0.15951644848411906 0.0007870916961826052 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 21560 16494 ERSDTFINL True PC9_epitope_Rep4 1093.54038800017 1093.53928993586 71.413 2 0.15951129576104825 0.0007870916961826052 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 67364 11106 LTDRLASLY True H1975_Epitope_Rep2 1050.57095985246 1050.5698699358602 47.754 2 0.1595067280711366 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000151553|Q5W0V3-2|FHIP2A', 'ENSG00000151553|ENST00000369248|FHIP2A'] 129909 6875 VTLTSEEEAR True PC9_epitope_Rep3 1133.5564319871298 1133.55532993586 31.46 2 0.15949962441350293 0.0007870916961826052 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 110391 20928 TILRLLQQV True PC9_epitope_Rep5 1082.68117900778 1082.68008993586 85.557 2 0.15949190108852426 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 76511 10940 NTDLGNDLY True H1975_Epitope_Rep2 1023.4509042894299 1023.4498099358599 47.115 2 0.1594871228405297 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 69661 17041 LVVTNLDKL True PC9_epitope_Rep2 1013.6120963884499 1013.61098993586 70.799 2 0.15948034334303984 0.0007870916961826052 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 139835 5680 YVDGVEVHN True NCI_RA007_Epitope_Rep5 1030.47197408718 1030.47086993586 28.537 2 0.1594778487231564 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 129447 10380 VTELHVISY True H1975_Epitope_Rep3 1059.5600608155898 1059.5589699358602 44.983 2 0.15947748668226674 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 53713 14242 KYDPNVYSI True PC9_epitope_Rep5 1097.53932537101 1097.53822993586 59.787 2 0.1594749394520495 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 28402 16146 FSDVMEDLY True H1975_Epitope_Rep2 1117.4637774722498 1117.46327496793 67.317 1 0.15947479342839446 0.0007870916961826052 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 48166 12368 KASDLYITL True NCI_RA007_Epitope_Rep5 1022.56481184286 1022.56370993586 54.22 2 0.15947418721417456 0.0007870916961826052 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2'] 116628 15377 TYHPGVPVF True PC9_epitope_Rep4 1015.5127167003499 1015.51160993586 67.08 2 0.1594599082238961 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1', 'ENST00000533739.1_1_11:89951170-89956122:-|nuORF', 'ENST00000533724.5_1_11:89947115-89956122:-|nuORF', 'ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 138580 19816 YRPPELLL True PC9_epitope_Rep3 999.5753169569099 999.57420993586 81.455 2 0.1594596882632866 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 86275 9033 QQDPQQYNV True PC9_epitope_Rep2 1118.49925146418 1118.49814993586 40.093 2 0.15945801972686266 0.0007870916961826052 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 21260 10400 ERIGETPEL True PC9_epitope_Rep6 1042.5294889632999 1042.52838993586 50.738 2 0.15945423506218184 0.0007870916961826052 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 88554 20296 RAIDFSPYL True PC9_epitope_Rep3 1080.56039516876 1080.55928993586 83.319 2 0.1594530636022345 0.0007870916961826052 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 17713 16954 EHSLVIDTL True PC9_epitope_Rep2 1025.53932537101 1025.5387749679298 70.458 1 0.15945020322653294 0.0007870916961826052 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 91651 17062 RPFQSELFA True PC9_epitope_Rep3 1093.55564414149 1093.5545499358602 70.781 2 0.15944909173779837 0.0007870916961826052 0.9438714419765777 ['ENST00000488504.5_1_22:50695267-50699938:-|nuORF', 'nc|ENSG00000188130|P53778-2|MAPK12', 'ENSG00000188130|ENST00000215659|MAPK12'] 9984 12030 AYSRVQYQF True PC9_epitope_Rep4 1160.5614577979202 1160.56036993586 54.076 2 0.1594468709943255 0.0007870916961826052 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 104286 14574 SSEELPLYY True H1975_Epitope_Rep1 1099.5073565363898 1099.50624993586 61.264 2 0.15944488822222136 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 8422 6231 ATQVAVSVPK True NCI_RA007_Epitope_Rep4 998.5760452328999 998.57494993586 30.574 2 0.15944117407704603 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 45712 18723 ISLPKGVVEV True PC9_epitope_Rep3 1039.62774645259 1039.62664993586 77.242 2 0.1594375600682559 0.0007870916961826052 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 133224 8231 WEDFKQNTP True H1975_Epitope_Rep2 1163.5247379360299 1163.52364993586 36.611 2 0.1594374523710352 0.0007870916961826052 0.9438714419765777 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 30325 8563 GADPRAISL True H1975_Epitope_Rep3 898.4872302284999 898.48612993586 37.926 2 0.15943244538037357 0.0007870916961826052 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 119053 7483 VEGQLEFR True H1975_Epitope_Rep3 976.4977949121999 976.49668993586 33.764 2 0.1594274019069288 0.0007870916961826052 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 139865 20719 YVDPVITSI True PC9_epitope_Rep3 1005.53826274185 1005.53767496793 84.969 1 0.15942525614357 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 39955 8858 HQQSIPAVL True NCI_RA007_Epitope_Rep5 991.5450794577898 991.5439899358599 40.736 2 0.15942410981895405 0.0007870916961826052 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 94832 20068 RYLTVATVF True PC9_epitope_Rep3 1068.59678067748 1068.59568993586 82.441 2 0.1594174841825118 0.0007870916961826052 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 1756 7556 AEHFSIIRA True H1975_Epitope_Rep3 1042.55597849466 1042.55488993586 34.045 2 0.15941647982200038 0.0007870916961826052 0.9438714419765777 ['ENSG00000181588|ENST00000402693|MEX3D', 'nc|ENSG00000181588|Q86XN8-2|MEX3D', 'nc|ENSG00000181588|Q86XN8-3|MEX3D', 'MEX3A|p.M202I|1|0.21|ENSG00000254726|chr1:156077531-156077531|C/A|missense_variant'] 104858 15053 STEQIPILY True H1975_Epitope_Rep1 1062.5597264624198 1062.55917496793 63.152 1 0.15941629535697355 0.0007870916961826052 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 24005 14653 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep5 1300.57578791316 1300.57468993586 61.365 2 0.15941208183364688 0.0007870916961826052 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 138704 15059 YRVFTTQEL True PC9_epitope_Rep4 1155.5924235730297 1155.5913299358601 65.853 2 0.15940724500038758 0.0007870916961826052 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 6640 21546 APYPGFLSV True PC9_epitope_Rep3 949.49091862661 949.48982993586 88.172 2 0.1594070675134462 0.0007870916961826052 0.9438714419765777 ['ENSG00000160447|ENST00000291906|PKN3'] 2875 4952 AEYNGRLAA True NCI_RA007_Epitope_Rep3 963.4773938207899 963.47628993586 26.473 2 0.15940569947127797 0.0007870916961826052 0.9438714419765777 ['ENSG00000101413|ENST00000373433|RPRD1B'] 138707 14154 YRVFTTQEL True PC9_epitope_Rep6 1155.5924235730297 1155.5913299358601 66.313 2 0.15940547757910906 0.0007870916961826052 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 118773 13663 VEDWDSFQA True H1975_Epitope_Rep2 1095.45090428943 1095.44980993586 57.694 2 0.15940517900376225 0.0007870916961826052 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 91640 6697 RPFQGTM[Oxidation]GV True PC9_epitope_Rep2 1007.4858507099498 1007.48474993586 31.167 2 0.15939392143636122 0.0007870916961826052 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 61135 7497 LLDEHHISY True H1975_Epitope_Rep3 1125.54547338061 1125.54382490379 33.819 3 0.15939152881983903 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 34818 17450 GQVDMDIKL True PC9_epitope_Rep1 1017.51648175145 1017.51538993586 71.919 2 0.1593893874398756 0.0007870916961826052 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 2442 3846 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 19.82 2 0.15938824259515277 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 57926 9409 LEQLRPVTV True H1975_Epitope_Rep2 1053.61824439805 1053.6171499358602 41.159 2 0.15938300290269844 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENST00000469714.1_1_X:17092694-17165601:+|nuORF', 'ENST00000470686.1_1_X:17156958-17165601:+|nuORF'] 120678 11897 VGAPKIPSV True PC9_epitope_Rep4 866.5225531080599 866.52144993586 53.538 2 0.15938132744227063 0.0007870916961826052 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 132883 17975 VYTSKSDVWSF True PC9_epitope_Rep4 1317.62411762413 1317.6230299358601 77.194 2 0.15937371529157243 0.0007870916961826052 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 118349 7999 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep2 964.4688036634799 964.46770993586 35.744 2 0.15937279138024513 0.0007870916961826052 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 11809 19524 DHLLSVSL True PC9_epitope_Rep3 882.4810822189 882.47998993586 80.33 2 0.15936930239134608 0.0007870916961826052 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 25428 13353 FELDTSVTP True H1975_Epitope_Rep2 1007.48114178855 1007.48057496793 56.494 1 0.1593664594326966 0.0007870916961826052 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2'] 86506 8327 QRAITGASL True PC9_epitope_Rep1 915.5137793295099 915.51268993586 36.863 2 0.15936399121383002 0.0007870916961826052 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 26115 19457 FHFTTPAL True PC9_epitope_Rep5 932.4756029156399 932.4745099358599 79.893 2 0.15936275615464982 0.0007870916961826052 0.9438714419765777 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 41974 9819 IEDFEARIA True H1975_Epitope_Rep3 1062.53457434374 1062.53346993586 42.795 2 0.1593596579742572 0.0007870916961826052 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF'] 105145 13602 STLTEEGVIKV True PC9_epitope_Rep6 1174.64451871554 1174.64342993586 64.073 2 0.1593355533315199 0.0007870916961826052 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 138857 4266 YSDM[Oxidation]REANY True H1975_Epitope_Rep3 1163.45533842731 1163.4542499358602 21.527 2 0.1593287502346137 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2', 'ENSG00000134339|ENST00000256733|SAA2', 'ENSG00000173432|ENST00000356524|SAA1'] 130814 20783 VVFEIQGTTV True PC9_epitope_Rep1 1091.58627556343 1091.5851699358602 84.771 2 0.1593260406835228 0.0007870916961826052 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 119720 9947 VETFSGVYK True PC9_epitope_Rep4 1028.5178616504397 1028.51676993586 45.916 2 0.1593259121975889 0.0007870916961826052 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF'] 123117 17567 VHDEGVWAL True PC9_epitope_Rep2 1024.4977949121999 1024.49668993586 72.847 2 0.15932564314586675 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 29319 21301 FVDPVLNQL True PC9_epitope_Rep2 1043.56514619603 1043.56404993586 87.398 2 0.15932550077036692 0.0007870916961826052 0.9438714419765777 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C'] 89013 4895 REEDPFRSTA True H1975_Epitope_Rep2 1206.5629143499 1206.56125490379 23.913 3 0.1593213501296999 0.0007870916961826052 0.9438714419765777 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000470601.5_1_3:51977371-51978822:+|nuORF'] 29235 16737 FVDEPLIHA True PC9_epitope_Rep5 1039.5338460677497 1039.53274993586 69.386 2 0.1593185619910823 0.0007870916961826052 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 109504 12542 THAAQQILL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 53.113 2 0.15931707098025102 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 109125 19528 TFITSGMRF True PC9_epitope_Rep5 1058.5219014850597 1058.5208099358601 80.166 2 0.15931294542940616 0.0007870916961826052 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 91661 20897 RPFTIPYLTA True PC9_epitope_Rep1 1177.64954452633 1177.64844993586 85.201 2 0.15930461471060742 0.0007870916961826052 0.9438714419765777 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8', 'nc|ENSG00000137413|Q7Z7C8-4|TAF8'] 127955 10303 VRPPVQVY True PC9_epitope_Rep4 956.5443511817998 956.54324993586 47.317 2 0.15930068433698302 0.0007870916961826052 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 75563 20101 NQMDGFDTL True PC9_epitope_Rep5 1039.4280606698699 1039.42747496793 82.365 1 0.15930058915189288 0.0007870916961826052 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 73251 7175 NEIDAEPPA True H1975_Epitope_Rep3 954.42944056886 954.4288949679301 32.574 1 0.1592976394647756 0.0007870916961826052 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 37303 12755 GVVPTIQKV True PC9_epitope_Rep1 939.5753169569098 939.57420993586 53.936 2 0.15929603628744968 0.0007870916961826052 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 6330 5605 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 28.354 2 0.15928729031372443 0.0007870916961826052 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 38180 11506 HESAEIFVV True H1975_Epitope_Rep2 1029.5131106231697 1029.51200993586 49.315 2 0.15928456037583003 0.0007870916961826052 0.9438714419765777 ['ENSG00000108592|ENST00000427159|FTSJ3'] 32498 10407 GGNFGFGDSR True PC9_epitope_Rep3 1012.4362572847999 1012.43516993586 44.97 2 0.15927702463284327 0.0007870916961826052 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 104783 12542 STDPLDAGVDY True H1975_Epitope_Rep3 1151.4982484046698 1151.49714993586 53.442 2 0.15927175165211924 0.0007870916961826052 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 8118 11300 ATESPDTGLYY True H1975_Epitope_Rep2 1215.52954853295 1215.5284499358602 48.512 2 0.15927136238528855 0.0007870916961826052 0.9438714419765777 ['ENSG00000104805|ENST00000405315|NUCB1'] 76744 20318 NTTDIFQTV True PC9_epitope_Rep1 1037.50293986229 1037.50184993586 82.982 2 0.1592650187581729 0.0007870916961826052 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 44892 12784 IQDEKYYQI True PC9_epitope_Rep2 1198.58700383942 1198.5859099358602 54.476 2 0.1592606907107163 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000147099|Q9BY41-4|HDAC8', 'ENSG00000147099|ENST00000373573|HDAC8', 'nc|ENSG00000147099|Q9BY41-6|HDAC8', 'nc|ENSG00000147099|Q9BY41-5|HDAC8'] 44249 15776 ILTERGYSF True PC9_epitope_Rep5 1084.55530978832 1084.5542099358602 65.676 2 0.1592523559676177 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 105530 11115 SVDPHGFISY True H1975_Epitope_Rep3 1120.5189242796 1120.5178299358602 47.849 2 0.15925109163416057 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 136396 7177 YHEGSAPAL True PC9_epitope_Rep2 943.4399456829099 943.43884993586 32.998 2 0.1592461737466129 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000558338.1_1_15:62199375-62209725:-|nuORF'] 104250 6774 SSDPDPAAY True H1975_Epitope_Rep2 921.3715913395699 921.3710449679301 30.971 1 0.1592378218970352 0.0007870916961826052 0.9438714419765777 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 95966 9597 SEADIRGFVA True H1975_Epitope_Rep1 1063.52982331647 1063.5287299358602 41.84 2 0.15921638291068216 0.0007870916961826052 0.9438714419765777 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 47409 15006 IYIKHPHLF True PC9_epitope_Rep5 1166.66004964038 1166.6584049037901 62.724 3 0.1592132352926505 0.0007870916961826052 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 95052 16974 RYSDSTFTF True PC9_epitope_Rep5 1122.49818883502 1122.49708993586 70.309 2 0.1592097363346041 0.0007870916961826052 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 132256 18338 VYKVPPFTF True PC9_epitope_Rep6 1096.59571804832 1096.5946299358602 83.179 2 0.1592090768180258 0.0007870916961826052 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 47036 17106 IVSNPVDILTY True H1975_Epitope_Rep1 1232.66525416012 1232.66414993586 71.228 2 0.15920826377085778 0.0007870916961826052 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 103304 7506 SQTSVAERL True PC9_epitope_Rep5 989.5141732523299 989.51306993586 33.823 2 0.15920732982088856 0.0007870916961826052 0.9438714419765777 ['ENSG00000171456|ENST00000375687|ASXL1'] 55975 15305 LDIDSPPITAR True PC9_epitope_Rep3 1196.6401020414398 1196.63900993586 64.022 2 0.15920458174870883 0.0007870916961826052 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 58917 8958 LFVGGIKEDTE True NCI_RA007_Epitope_Rep4 1206.61321858726 1206.6121299358601 41.293 2 0.1592045489163775 0.0007870916961826052 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 104833 15901 STEFNPLIY True H1975_Epitope_Rep2 1082.5284263341398 1082.5278749679298 66.364 1 0.15919753895283764 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD', 'MADD|p.P469L|1|0.14|ENSG00000110514|chr11:47281690-47281690|C/T|missense_variant'] 128190 12483 VRTPYTMSY True PC9_epitope_Rep2 1116.52738078832 1116.5262899358602 53.325 2 0.15919688993519282 0.0007870916961826052 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 77122 7735 NYARGHYTI True PC9_epitope_Rep5 1093.5304920228102 1093.52938993586 34.694 2 0.15919582843349048 0.0007870916961826052 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 40840 11047 HVLEEVQQV True PC9_epitope_Rep2 1079.56112344475 1079.56002993586 47.812 2 0.15919392311433878 0.0007870916961826052 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 25593 12430 FESVSHLISY True H1975_Epitope_Rep2 1180.57643915572 1180.57534993586 52.898 2 0.15918867638053444 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1'] 88670 8244 RAYDGTTYL True H1975_Epitope_Rep2 1058.50327421546 1058.5021699358601 36.664 2 0.15918855240196983 0.0007870916961826052 0.9438714419765777 ['ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39'] 139406 8924 YTEEDAVSY True H1975_Epitope_Rep3 1075.43458551895 1075.43348993586 39.324 2 0.15918363522936857 0.0007870916961826052 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 97713 5820 SHEEIAM[Oxidation]ATVT True NCI_RA007_Epitope_Rep1 1203.54415343171 1203.5430499358602 26.692 2 0.1591832859874417 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 9439 6086 AVVTQVNKV True PC9_epitope_Rep2 956.5654805492 956.56438993586 28.802 2 0.15917571492954988 0.0007870916961826052 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 61053 6619 LLATDVASR True NCI_RA007_Epitope_Rep2 944.5290950404799 944.52798993586 30.356 2 0.15916306903177915 0.0007870916961826052 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47'] 9935 16459 AYQHLFYLL True NCI_RA007_Epitope_Rep5 1166.6124307416198 1166.61132993586 70.069 2 0.15915225903884977 0.0007870916961826052 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 86804 13551 QRNPQGFVL True PC9_epitope_Rep5 1057.5668775315298 1057.56578993586 57.147 2 0.15914707923478197 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 132475 6940 VYPDGIRHI True NCI_RA007_Epitope_Rep4 1068.5716285587998 1068.5705299358601 33.317 2 0.1591420727332698 0.0007870916961826052 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 35695 10580 GTQPWFISK True NCI_RA007_Epitope_Rep3 1062.5498304850598 1062.5487299358601 48.668 2 0.15914163207547724 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'MYLK|p.K903Rfs*3|1|0.3|ENSG00000065534|chr3:123700762-123700762|C/-|frameshift_variant'] 26729 21497 FLDGNELTL True PC9_epitope_Rep2 1020.51277627 1020.51166993586 88.158 2 0.15914024727721435 0.0007870916961826052 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 138384 11723 YRDNDSDLAL True PC9_epitope_Rep2 1180.53603089572 1180.5349299358602 50.426 2 0.15913319531912737 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2'] 135277 11252 YAYTGRLEL True H1975_Epitope_Rep2 1084.5553097883198 1084.5542099358602 48.324 2 0.15913306572483168 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 98062 15712 SHVDLVVM[Oxidation]V True PC9_epitope_Rep2 1013.52156751233 1013.52046993586 65.71 2 0.1591254312996706 0.0007870916961826052 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 75431 9837 NQGESITHAL True PC9_epitope_Rep1 1068.51998690876 1068.5188899358602 42.699 2 0.15912479737041516 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 139858 15403 YVDPQFLTY True H1975_Epitope_Rep3 1144.54407639828 1144.54357496793 64.659 1 0.15911470139343306 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 72142 20651 MRFLAATFL True PC9_epitope_Rep4 1068.57902243836 1068.57792993586 87.592 2 0.1591131799004873 0.0007870916961826052 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 70508 18377 LYTEKFEEF True PC9_epitope_Rep1 1204.5652057656796 1204.5641099358602 75.477 2 0.1591091852277391 0.0007870916961826052 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 3230 4568 AGFAGDDAPR True NCI_RA007_Epitope_Rep3 975.4410083120698 975.43990993586 24.85 2 0.15910890931913307 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 29790 8782 FVTFDDHD True NCI_RA007_Epitope_Rep4 994.40322582102 994.40212993586 40.589 2 0.15910732363328267 0.0007870916961826052 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 98265 5119 SIFEPAKGGEK True NCI_RA007_Epitope_Rep4 1161.6029882567298 1161.60133490379 26.205 3 0.15910602666524565 0.0007870916961826052 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 3985 19282 AHFDGLIFV True PC9_epitope_Rep6 1017.5283667644899 1017.52726993586 86.815 2 0.1591060008506857 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 105455 17263 SVASELEKI True PC9_epitope_Rep1 974.5284263341399 974.5273299358599 71.221 2 0.15909987906477857 0.0007870916961826052 0.9438714419765777 ['ENSG00000172244|ENST00000306862|C5orf34'] 64495 17570 LQWNGKEFTA True PC9_epitope_Rep5 1192.58767254576 1192.58656993586 72.592 2 0.1590967622616024 0.0007870916961826052 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 32600 8828 GHDASQITL True PC9_epitope_Rep4 940.46140940348 940.46030993586 41.489 2 0.15908754780917259 0.0007870916961826052 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 53273 14664 KTIEDDLVSA True PC9_epitope_Rep5 1089.55536935797 1089.55426993586 61.408 2 0.1590801425921665 0.0007870916961826052 0.9438714419765777 ['ENST00000544662.1_1_12:132414461-132416977:+|nuORF', 'nc|ENSG00000177192|Q9Y606-2|PUS1', 'ENSG00000177192|ENST00000376649|PUS1'] 127949 10834 VRPPVQVY True PC9_epitope_Rep2 956.5443511817998 956.54324993586 46.992 2 0.15907836968478448 0.0007870916961826052 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 87796 19701 QVIEELFKA True PC9_epitope_Rep3 1075.5913609438699 1075.59026993586 81.01 2 0.1590602072321244 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000137513|Q96I59-2|NARS2', 'ENSG00000137513|ENST00000281038|NARS2'] 2120 5890 AELQSRLAA True H1975_Epitope_Rep2 957.5243440132099 957.52324993586 27.641 2 0.15905668692415087 0.0007870916961826052 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 74095 5608 NHVNSGCQL True PC9_epitope_Rep1 970.42906372938 970.42796993586 26.398 2 0.15905592220816722 0.0007870916961826052 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 101143 6929 SLVNLGGSK True H1975_Epitope_Rep2 873.4919812557699 873.49088993586 31.573 2 0.15905585495422928 0.0007870916961826052 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 76220 7101 NRYDGQVAV True PC9_epitope_Rep2 1020.4988575413598 1020.49776993586 32.712 2 0.1590551611622928 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1', 'ENST00000490869.1_1_X:47062096-47065733:+|nuORF'] 108453 14187 TEELPQLINA True H1975_Epitope_Rep1 1126.5870038394198 1126.5859099358602 59.747 2 0.15905183095260256 0.0007870916961826052 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 67930 16658 LTLGKLEQV True PC9_epitope_Rep1 999.5964463243098 999.59534993586 68.904 2 0.15905131439527315 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 132103 19707 VYILQPEVI True PC9_epitope_Rep6 1072.6168474157198 1072.61574993586 88.46 2 0.15904284411328673 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 25614 7957 FETLQAQAGK True PC9_epitope_Rep1 1091.5611234447497 1091.56002993586 35.429 2 0.15903869449260272 0.0007870916961826052 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 31229 16346 GDLGIEIPAEK True PC9_epitope_Rep5 1140.60265390356 1140.60154993586 67.872 2 0.15903441627692208 0.0007870916961826052 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 41983 6589 IEDGKVVTV True H1975_Epitope_Rep2 958.53351171458 958.53240993586 30.255 2 0.15900573780552218 0.0007870916961826052 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF'] 84756 17994 QHIDFVTAI True PC9_epitope_Rep4 1042.54474510462 1042.54364993586 77.271 2 0.15900387823218848 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44', 'nc|ENSG00000131725|Q5JSH3-3|WDR44'] 140414 20484 YYFDSYAHF True PC9_epitope_Rep3 1211.4923751785898 1211.4912699358601 84.05 2 0.15900059685034612 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.E343Kfs*18|1|0.21|ENSG00000111218|chr12:3592277-3592277|G/-|frameshift_variant', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8'] 94471 14057 RYGLVTNEI True PC9_epitope_Rep2 1063.56620882519 1063.5651099358602 59.348 2 0.1589934597825672 0.0007870916961826052 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 31875 5665 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 26.788 2 0.1589934555422159 0.0007870916961826052 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 5009 20252 ALLDRIVSV True PC9_epitope_Rep1 984.59678067748 984.59568993586 82.728 2 0.15898641401137129 0.0007870916961826052 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 54165 20155 KYNMVSYLL True PC9_epitope_Rep2 1129.58416738845 1129.58306993586 82.938 2 0.15898525680753642 0.0007870916961826052 0.9438714419765777 ['ENSG00000138678|ENST00000264409|GPAT3'] 7210 12950 ARDFTVSAL True PC9_epitope_Rep6 978.5134449763399 978.51234993586 61.362 2 0.15898408238904532 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 8202 12808 ATGSWDSFLK True NCI_RA007_Epitope_Rep5 1110.53457434374 1110.53346993586 55.945 2 0.15898340384925 0.0007870916961826052 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 138999 7139 YSFTTTAER True NCI_RA007_Epitope_Rep2 1074.49818883502 1074.49708993586 32.39 2 0.15898030258550516 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 5500 19106 AMSSKFFLV True PC9_epitope_Rep4 1028.5364889200398 1028.5353899358602 81.583 2 0.1589795690150343 0.0007870916961826052 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 106804 17525 SYGKINILL True PC9_epitope_Rep6 1019.60153170475 1019.60042993586 80.043 2 0.15897673931884646 0.0007870916961826052 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant'] 52803 13846 KQTDVLQQL True PC9_epitope_Rep1 1071.59242357303 1071.5913299358601 58.1 2 0.1589696678643939 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 1633 7962 AEFVEVTK True PC9_epitope_Rep4 921.4807478657299 921.47964993586 38.069 2 0.15896509720865495 0.0007870916961826052 0.9438714419765777 ['CON__P02769'] 132098 21576 VYILQPEVI True PC9_epitope_Rep2 1072.6168474157198 1072.61627496793 88.464 1 0.15896269110901678 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 27770 8343 FQEENTEKL True PC9_epitope_Rep1 1136.5349682665599 1136.5338699358601 36.925 2 0.1589568098748772 0.0007870916961826052 0.9438714419765777 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 114466 4885 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59746993586 23.875 2 0.15895551749097991 0.0007870916961826052 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 37310 11512 GVVPTIQKV True PC9_epitope_Rep4 939.5753169569098 939.57420993586 52.042 2 0.1589477938514362 0.0007870916961826052 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 2023 7265 AELATRALP True NCI_RA007_Epitope_Rep3 940.5341804209199 940.53308993586 35.687 2 0.1589467039687221 0.0007870916961826052 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 4419 13384 AIVDKVPSV True PC9_epitope_Rep5 926.54368247546 926.54258993586 56.498 2 0.15894587459818432 0.0007870916961826052 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 21480 4396 ERQPGAASL True PC9_epitope_Rep4 927.4773938207899 927.47628993586 23.354 2 0.1589453190101112 0.0007870916961826052 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 70231 19996 LYMDKFEEF True PC9_epitope_Rep2 1220.5423621461198 1220.54126993586 82.317 2 0.1589444914057658 0.0007870916961826052 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG', 'ENST00000445715.5_1_Y:21755293-21766003:+|nuORF'] 118824 11528 VEEGFSIQA True H1975_Epitope_Rep1 978.4658260775799 978.4652749679301 49.329 1 0.15894208521445036 0.0007870916961826052 0.9438714419765777 ['ENSG00000172409|ENST00000533682|CLP1'] 113375 19149 TQLGPPYHIL True PC9_epitope_Rep1 1137.61824439805 1137.6171499358602 78.45 2 0.15894032761311155 0.0007870916961826052 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 44030 15059 ILLAELEQLK True NCI_RA007_Epitope_Rep1 1168.7067250492798 1168.70562993586 62.644 2 0.15893571195714143 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 45843 4829 ISQEQM[Oxidation]QEFR True H1975_Epitope_Rep3 1310.59250060646 1310.5914099358602 23.7 2 0.15893346661086485 0.0007870916961826052 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 86968 16676 QRVPLSVQL True PC9_epitope_Rep1 1038.61857875122 1038.61748993586 68.973 2 0.15893143711573143 0.0007870916961826052 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 67167 10237 LTDFIQKY True H1975_Epitope_Rep3 1026.53859709502 1026.53750993586 44.424 2 0.158923065811427 0.0007870916961826052 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 38474 14456 HHALPITDL True PC9_epitope_Rep1 1015.54507945779 1015.5439899358599 60.429 2 0.15891986641055833 0.0007870916961826052 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 39648 12156 HPQVNIYSV True PC9_epitope_Rep4 1055.53999407735 1055.5388899358602 54.576 2 0.15891963395143158 0.0007870916961826052 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 40726 12833 HTVEDLVKV True PC9_epitope_Rep1 1038.5709598524597 1038.5698699358602 54.237 2 0.15891731598616993 0.0007870916961826052 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 21341 18873 ERLGQFMTL True PC9_epitope_Rep4 1093.55901526977 1093.5579099358602 80.681 2 0.15891312797689636 0.0007870916961826052 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 132939 23317 VYTVVDEMFL True PC9_epitope_Rep1 1214.5893123385397 1214.58820993586 94.479 2 0.15891235678524343 0.0007870916961826052 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 37964 7308 HEFLHEVPAA True H1975_Epitope_Rep1 1148.56145779792 1148.56036993586 33.119 2 0.15890947958412285 0.0007870916961826052 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 102995 17243 SQISDTSVVL True PC9_epitope_Rep4 1047.5448046742702 1047.54370993586 74.333 2 0.15890630200369973 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 60168 13674 LHYPSTTAL True PC9_epitope_Rep3 1001.51819600361 1001.51708993586 57.664 2 0.1589062309640113 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 92221 19840 RQIDQFLVVA True PC9_epitope_Rep3 1187.66625721963 1187.6651699358601 81.55 2 0.15890607183749828 0.0007870916961826052 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3', 'ENST00000531261.1_1_11:62365080-62365595:-|nuORF', 'ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 18753 12079 ELDPNNAVYY True H1975_Epitope_Rep1 1196.53496826656 1196.5338699358601 51.474 2 0.1589050299952572 0.0007870916961826052 0.9438714419765777 ['ENSG00000197860|ENST00000381007|SGTB'] 83107 19895 PYNPILGETF True PC9_epitope_Rep6 1149.57062549929 1149.5695299358601 89.181 2 0.1589033999995656 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 38791 7323 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.54013490379 33.551 3 0.15890018489329763 0.0007870916961826052 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 89274 14173 RELENLIGISC True H1975_Epitope_Rep2 1245.63872214245 1245.63762993586 59.67 2 0.15888564640992403 0.0007870916961826052 0.9438714419765777 ['ENST00000462285.5_1_1:63919583-63920635:-|nuORF', 'ENST00000461681.5_1_1:63906715-63922830:-|nuORF', 'nc|ENSG00000142856|Q13352-2|ITGB3BP', 'ENSG00000142856|ENST00000271002|ITGB3BP', 'ENST00000460394.5_1_1:63917661-63988804:-|nuORF', 'nc|ENSG00000142856|Q13352-5|ITGB3BP'] 83036 17233 PYLDKFFTL True NCI_RA007_Epitope_Rep5 1142.6011973515801 1142.60010993586 73.06 2 0.1588853927469435 0.0007870916961826052 0.9438714419765777 ['ENSG00000130158|ENST00000294618|DOCK6'] 109896 5144 THNPTNATL True PC9_epitope_Rep3 967.47230844035 967.47120993586 24.872 2 0.1588817685317038 0.0007870916961826052 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 73982 18388 NHQDVAGVFAL True PC9_epitope_Rep4 1169.58292151849 1169.58182993586 78.795 2 0.15887324147103712 0.0007870916961826052 0.9438714419765777 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 53061 16296 KSADEVLFTGV True PC9_epitope_Rep6 1164.6026539035602 1164.60154993586 75.045 2 0.1588713347747877 0.0007870916961826052 0.9438714419765777 ['ENSG00000089006|ENST00000377759|SNX5', 'ENST00000490175.5_1_20:17923003-17949420:-|nuORF'] 119835 6040 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51676993586 28.21 2 0.15886872468149968 0.0007870916961826052 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 87778 11885 QVHGTITGVDV True PC9_epitope_Rep5 1124.5825871653199 1124.5814899358602 50.714 2 0.1588678809743259 0.0007870916961826052 0.9438714419765777 ['ENSG00000167088|ENST00000300413|SNRPD1'] 45255 10559 IRSDTSQIL True PC9_epitope_Rep5 1031.56112344475 1031.56002993586 45.603 2 0.15886695147795946 0.0007870916961826052 0.9438714419765777 ['ENST00000485049.1_1_20:49411653-49449308:+|nuORF', 'nc|ENSG00000124243|Q8TDM0-2|BCAS4', 'ENSG00000124243|ENST00000371608|BCAS4', 'nc|ENSG00000124243|Q8TDM0-3|BCAS4', 'nc|ENSG00000124243|Q8TDM0|BCAS4'] 29405 21708 FVFPGELLL True H1975_Epitope_Rep1 1033.5848190114498 1033.5837299358602 90.196 2 0.1588668582029072 0.0007870916961826052 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 116943 18174 TYPENWRAF True PC9_epitope_Rep5 1182.5458077337798 1182.54470993586 74.917 2 0.15886339979538347 0.0007870916961826052 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 1473 13091 [Acetylation]-AEELVLER True H1975_Epitope_Rep1 999.5236756231699 999.52256993586 55.443 2 0.15886237140051895 0.0007870916961826052 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 40763 21422 HVDEFLTFV True PC9_epitope_Rep1 1105.54441075145 1105.5433099358602 87.238 2 0.15885618114435296 0.0007870916961826052 0.9438714419765777 ['ENSG00000142623|ENST00000375471|PADI1'] 74722 24570 NLLDLLTEV True PC9_epitope_Rep3 1028.57537652656 1028.57426993586 99.87 2 0.15885456344226187 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 136647 5757 YIDQEELNK True H1975_Epitope_Rep3 1150.5506183307 1150.5495299358602 27.17 2 0.15885243148324238 0.0007870916961826052 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 55043 23203 LALFPGVAL True PC9_epitope_Rep2 899.5480395799099 899.5474949679301 94.733 1 0.15885107649456748 0.0007870916961826052 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 103060 15773 SQLEDAIRL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 72.914 2 0.1588485545755868 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 25968 16215 FGVVVVGVGR True PC9_epitope_Rep2 987.5865503469497 987.58544993586 67.618 2 0.1588478049086804 0.0007870916961826052 0.9438714419765777 ['ENST00000453612.1_1_7:43810757-43831091:+|nuORF', 'ENSG00000106605|ENST00000265523|BLVRA'] 1015 8388 AEAEPPSEVV True H1975_Epitope_Rep2 1026.48695544498 1026.4858499358602 37.217 2 0.1588438909740087 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 40463 4954 HSDQITASSQY True H1975_Epitope_Rep2 1235.54184455215 1235.54074993586 24.139 2 0.15884361551475792 0.0007870916961826052 0.9438714419765777 ['NRP1|p.F660Hfs*6|1|0.2|ENSG00000099250|chr10:33192357-33192365|GTGGCAGAA/TGACATG|frameshift_variant', 'ENSG00000099250|ENST00000374867|NRP1', 'nc|ENSG00000099250|O14786-3|NRP1', 'nc|ENSG00000099250|O14786-2|NRP1'] 22294 13993 ETEDVFYTY True H1975_Epitope_Rep2 1165.4815357113698 1165.48042993586 58.973 2 0.15884342276806176 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000070159|P26045-3|PTPN3', 'nc|ENSG00000070159|P26045-2|PTPN3', 'ENSG00000070159|ENST00000374541|PTPN3'] 88851 7972 REAEEPVFAA True H1975_Epitope_Rep2 1117.54038800017 1117.53928993586 35.611 2 0.15884058406233004 0.0007870916961826052 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 45459 5739 ISEGDDKIEYR True NCI_RA007_Epitope_Rep2 1323.63065955655 1323.62902490379 26.94 3 0.15883336338327445 0.0007870916961826052 0.9438714419765777 ['ENSG00000105202|ENST00000221801|FBL', 'ENST00000599159.1_1_19:40329665-40336940:-|nuORF'] 104452 5919 SSLNLRET True NCI_RA007_Epitope_Rep2 918.47705946762 918.47596993586 27.64 2 0.15883318913856342 0.0007870916961826052 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'VIM|p.D429Y|1|0.25|ENSG00000026025|chr10:17236305-17236305|G/T|missense_variant'] 106859 16509 SYIEHIFEI True NCI_RA007_Epitope_Rep2 1149.57062549929 1149.57007496793 68.945 1 0.15883313637135485 0.0007870916961826052 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 45155 19285 IRDLNIVVV True PC9_epitope_Rep5 1039.6389798426299 1039.6378899358601 79.223 2 0.15882648254707457 0.0007870916961826052 0.9438714419765777 ['ATL2|p.K282Nfs*32|1|0.35|ENSG00000119787|chr2:38310406-38310406|C/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'ENST00000474535.2_1_2:38545640-38570535:-|nuORF'] 8016 11627 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.48637496793 49.793 1 0.15881579677793878 0.0007870916961826052 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 28369 14128 FSDLYNEVY True H1975_Epitope_Rep2 1148.50260550912 1148.50207496793 59.498 1 0.1588154438946582 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 87047 7184 QSDPTQSGMY True H1975_Epitope_Rep3 1112.44443901 1112.4433499358602 32.608 2 0.15881476645600473 0.0007870916961826052 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 89506 13670 REQQLISAVFP True H1975_Epitope_Rep2 1286.6982856238997 1286.69718993586 57.722 2 0.15881450833695954 0.0007870916961826052 0.9438714419765777 ['ENST00000577961.5_1_18:756649-756733:-|nuORF', 'ENST00000418510.1_1_22:26043331-26044389:+|nuORF'] 335 20138 AAIPIQINV True PC9_epitope_Rep4 937.55966689277 937.55856993586 85.596 2 0.15881424506272138 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 15001 18635 DYVEGLRVF True PC9_epitope_Rep6 1096.5553097883198 1096.5542099358602 84.322 2 0.15881348182205213 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 62188 16692 LLPNHSYVF True PC9_epitope_Rep2 1088.5654805492 1088.5643899358602 69.453 2 0.15881101052895732 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 105606 9969 SVELPIVGK True NCI_RA007_Epitope_Rep3 940.5593325395998 940.55822993586 46.297 2 0.15880668351909258 0.0007870916961826052 0.9438714419765777 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 94663 7563 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.61488490379 36.873 3 0.15879551713697274 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 82966 18953 PYADQVFRI True PC9_epitope_Rep2 1107.57129420563 1107.57018993586 78.267 2 0.15879195356737622 0.0007870916961826052 0.9438714419765777 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ'] 43134 9473 IGPLGLSPK True NCI_RA007_Epitope_Rep1 880.5382031722 880.53710993586 40.843 2 0.15879124571898823 0.0007870916961826052 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12'] 73772 18124 NHDFQALAL True PC9_epitope_Rep1 1027.50869394907 1027.50758993586 74.505 2 0.15878408326143081 0.0007870916961826052 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'ENST00000526215.5_1_1:31454238-31532202:-|nuORF', 'ENST00000420234.5_1_2:20508312-20527121:-|nuORF', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 4576 8468 ALAAGGYDVEK True PC9_epitope_Rep2 1092.54513902744 1092.5440499358601 37.939 2 0.15877935019158823 0.0007870916961826052 0.9438714419765777 ['ENSG00000184357|ENST00000331442|H1-5'] 87720 9780 QVEEELTHLQK True PC9_epitope_Rep5 1352.6935941662798 1352.69194490379 42.589 3 0.15877584632124422 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000167460|P67936-2|TPM4'] 38499 6270 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 29.152 2 0.15877377731006562 0.0007870916961826052 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 6699 10198 AQASDLEKI True PC9_epitope_Rep5 973.50802524273 973.50692993586 44.216 2 0.15877132383804204 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530666.1_1_11:764238-764842:+|nuORF'] 135932 11909 YEWVNPAA True H1975_Epitope_Rep1 948.4341320264798 948.4335849679301 50.809 1 0.15876716571066904 0.0007870916961826052 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 112303 7784 TMDNPTTTQY True H1975_Epitope_Rep1 1170.48630382198 1170.4852099358602 34.896 2 0.15876554543633448 0.0007870916961826052 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 75942 19241 NRFLGDYVV True PC9_epitope_Rep5 1081.55564414149 1081.5545499358602 79.049 2 0.1587632020300331 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 110191 15896 TIDQLYLEY True H1975_Epitope_Rep1 1156.5652057656798 1156.5641099358602 66.453 2 0.15875987464010488 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 85764 18025 QLVRDLLEV True PC9_epitope_Rep6 1083.62880908175 1083.6277099358601 81.96 2 0.1587557739867253 0.0007870916961826052 0.9438714419765777 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 7527 8209 ASETLQSPGY True H1975_Epitope_Rep3 1051.48220441771 1051.48110993586 36.558 2 0.15874905796048044 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'PKMYT1|p.F483Lfs*14|1|0.54|ENSG00000127564|chr16:2973004-2973004|A/-|frameshift_variant', 'ENSG00000127564|ENST00000262300|PKMYT1'] 86957 9624 QRVDSPVTV True PC9_epitope_Rep3 999.5349086969098 999.53380993586 41.97 2 0.1587459802883288 0.0007870916961826052 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 105539 7514 SVDPTQTEY True H1975_Epitope_Rep1 1038.45056993626 1038.4494699358602 33.902 2 0.1587436129816825 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 23890 11690 EYMKHTRLF True PC9_epitope_Rep3 1223.6121134717898 1223.61046490379 49.985 3 0.15873973897523597 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 113155 19869 TQDAVPLTL True PC9_epitope_Rep2 956.51786165044 956.51676993586 81.82 2 0.15873858572968078 0.0007870916961826052 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 72255 20081 MRYVASYLLA True PC9_epitope_Rep5 1185.6216155263298 1185.6205099358601 82.291 2 0.15873821934124205 0.0007870916961826052 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 38756 7901 HHYEGAVVI True PC9_epitope_Rep4 1023.5137793295098 1023.5126899358601 37.819 2 0.15873812065508955 0.0007870916961826052 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 22296 10677 ETEDVNLAY True H1975_Epitope_Rep1 1052.4662200004 1052.46567496793 46.028 1 0.158736550522668 0.0007870916961826052 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000153767|ENST00000283875|GTF2E1'] 140601 14461 YYLTPDGQRF True PC9_epitope_Rep6 1258.59823722946 1258.5971499358602 67.513 2 0.1587300207212385 0.0007870916961826052 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 139684 11343 YTTDRVMTV True PC9_epitope_Rep1 1084.5222954078802 1084.52118993586 48.509 2 0.15872931779604302 0.0007870916961826052 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 68865 7059 LVEEELDR True NCI_RA007_Epitope_Rep1 1001.5029398622898 1001.50184993586 31.453 2 0.15872447599500997 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000558400.1_1_15:63349204-63351954:+|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 9446 5281 AVVTQVNKV True PC9_epitope_Rep6 956.5654805492 956.56438993586 28.11 2 0.1587218196820317 0.0007870916961826052 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 51952 6663 KKVPVSVNL True NCI_RA007_Epitope_Rep4 982.61751612206 982.61640993586 32.252 2 0.1587170022079049 0.0007870916961826052 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 98267 4425 SIFEPAKGGEK True NCI_RA007_Epitope_Rep5 1161.6029882567298 1161.60133490379 23.654 3 0.15871530235327774 0.0007870916961826052 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 103785 15856 SRFPTNVDL True PC9_epitope_Rep3 1047.53490869691 1047.53380993586 66.141 2 0.1587071737467499 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000155393|Q7Z4Q2-2|HEATR3', 'ENSG00000155393|ENST00000299192|HEATR3', 'nc|ENSG00000155393|Q7Z4Q2-3|HEATR3', 'HEATR3|p.T435Lfs*21|1|0.25|ENSG00000155393|chr16:50084577-50084577|G/-|frameshift_variant'] 44845 19743 IPYHIVNIV True PC9_epitope_Rep1 1066.6175161220601 1066.61640993586 80.768 2 0.15870613016525817 0.0007870916961826052 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 3862 10010 AHAVGNVEL True PC9_epitope_Rep5 908.4715801643599 908.47048993586 43.481 2 0.15870534088242658 0.0007870916961826052 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ARHGAP15-KYNU|2|fusion', 'ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU', 'KYNU|p.F306Lfs*17|1|0.1|ENSG00000115919|chr2:143029640-143029640|T/-|frameshift_variant', 'KYNU-ARHGAP15|1|fusion'] 70327 16959 LYPLTNYTF True NCI_RA007_Epitope_Rep4 1130.56481184286 1130.56370993586 73.497 2 0.15869791137709907 0.0007870916961826052 0.9438714419765777 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 75894 10242 NRDQYSHLL True PC9_epitope_Rep5 1144.56252042708 1144.56088490379 44.383 3 0.15869405110440055 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 24056 6547 EYQELM[Oxidation]SVK True NCI_RA007_Epitope_Rep2 1141.5325261188498 1141.5314299358602 30.079 2 0.15869384731601216 0.0007870916961826052 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 43608 19244 IIIPEIQKV True PC9_epitope_Rep1 1051.66413196131 1051.66302993586 78.822 2 0.15868719653706803 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 69990 18842 LYFHINQTL True PC9_epitope_Rep4 1147.60259433391 1147.6014899358602 80.563 2 0.15868687014947025 0.0007870916961826052 0.9438714419765777 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 15312 19716 EAITHLLGV True PC9_epitope_Rep1 951.5389314481898 951.53782993586 80.663 2 0.1586844097241563 0.0007870916961826052 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 110051 18434 THYDHVLIEL True PC9_epitope_Rep3 1238.6295373577398 1238.62789490379 76.11 3 0.15867733580435098 0.0007870916961826052 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 77030 19546 NVVEQFLQA True PC9_epitope_Rep6 1046.53965972418 1046.53856993586 87.847 2 0.15867719821558773 0.0007870916961826052 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25'] 46166 11778 ITDDLHFY True H1975_Epitope_Rep3 1022.47091145802 1022.4698099358601 50.448 2 0.15867167458984896 0.0007870916961826052 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 113782 18013 TRDQFLDTL True PC9_epitope_Rep5 1107.5560380643099 1107.5549499358601 74.303 2 0.15867017584540571 0.0007870916961826052 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 103691 14442 SRDQTVLGL True PC9_epitope_Rep3 987.5349086969098 987.53380993586 60.657 2 0.15866715434359183 0.0007870916961826052 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1'] 46509 9879 ITPQTIHGV True PC9_epitope_Rep1 964.5341804209198 964.53308993586 42.857 2 0.1586653365991375 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 104920 8651 STFSEIFKK True NCI_RA007_Epitope_Rep3 1085.57571087973 1085.57460993586 41.108 2 0.15866351489207645 0.0007870916961826052 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 94607 18303 RYKLYQEMF True PC9_epitope_Rep5 1276.6274291827597 1276.6263299358602 75.417 2 0.1586608336621038 0.0007870916961826052 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 74814 17265 NLPDEIYHV True PC9_epitope_Rep2 1098.5345743437401 1098.53346993586 71.669 2 0.15865948761596477 0.0007870916961826052 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 30981 7180 GATEITTTITK True NCI_RA007_Epitope_Rep1 1134.61321858726 1134.6121299358601 31.917 2 0.15865911331221322 0.0007870916961826052 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000024146'] 59108 9564 LGEHNIDVLE True NCI_RA007_Epitope_Rep3 1137.56660274801 1137.56550993586 44.705 2 0.1586585543726397 0.0007870916961826052 0.9438714419765777 ['CON__P00761'] 72374 9738 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4690749679298 42.387 1 0.15865379358067258 0.0007870916961826052 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 61957 22827 LLLPDYYLVTV True PC9_epitope_Rep4 1307.73769082439 1307.7365899358601 96.028 2 0.15865014061190388 0.0007870916961826052 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 77174 22748 NYGDYFNVF True PC9_epitope_Rep3 1137.47672511445 1137.47562993586 92.767 2 0.15864820947330993 0.0007870916961826052 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 58339 15720 LETVILGLLK True H1975_Epitope_Rep1 1097.7059967732898 1097.7048899358601 65.762 2 0.15864454491276608 0.0007870916961826052 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 21482 4560 ERQPGAASL True PC9_epitope_Rep4 927.4773938207899 927.47628993586 24.036 2 0.15864362281080518 0.0007870916961826052 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 120016 20948 VFDPKVFTF True PC9_epitope_Rep2 1098.57498260374 1098.57388993586 86.025 2 0.1586326287095527 0.0007870916961826052 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 22982 16406 EVIKELAQI True PC9_epitope_Rep4 1041.6070110080097 1041.60647496793 71.067 1 0.15862870663295212 0.0007870916961826052 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 4157 10838 AHYSAVTSL True PC9_epitope_Rep1 947.47124581119 947.47014993586 46.575 2 0.15862599502272393 0.0007870916961826052 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 44582 19487 IPFWRNTAV True PC9_epitope_Rep1 1102.59236400338 1102.59126993586 79.775 2 0.15862576622785698 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3'] 21766 11214 ESDEVELSY True H1975_Epitope_Rep2 1069.44515020265 1069.4440499358602 48.176 2 0.1586236170945189 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 2593 8153 AESIDNPLHEA True H1975_Epitope_Rep2 1194.55168095986 1194.5505899358602 36.31 2 0.1586234588325648 0.0007870916961826052 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 128391 6304 VSDSKQFTY True H1975_Epitope_Rep3 1073.50293986229 1073.50184993586 29.253 2 0.15862276126239966 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 89307 8652 RELVKNWVP True H1975_Epitope_Rep1 1139.64512785223 1139.64402993586 38.209 2 0.15861737665864936 0.0007870916961826052 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 7217 13665 ARDNTINLI True PC9_epitope_Rep2 1028.56145779792 1028.56036993586 57.854 2 0.15861710267649862 0.0007870916961826052 0.9438714419765777 ['ENSG00000163466|ENST00000315717|ARPC2'] 17322 17894 EHDPQYAVIL True PC9_epitope_Rep5 1183.5873381925899 1183.58624993586 73.847 2 0.15861367018840636 0.0007870916961826052 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 21271 8115 ERIMKAQAL True PC9_epitope_Rep5 1058.5906497512199 1058.58954993586 36.154 2 0.15861274384664273 0.0007870916961826052 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 48527 11359 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 50.344 2 0.15861035128030948 0.0007870916961826052 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 99606 19859 SLFPGKLEV True PC9_epitope_Rep1 988.5593325396 988.55822993586 81.204 2 0.15860739492089998 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 38568 20981 HHFLELVTL True PC9_epitope_Rep1 1107.60767971435 1107.60658993586 85.529 2 0.15860670888624462 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 33550 7784 GLIYEETR True NCI_RA007_Epitope_Rep2 979.49746055903 979.49636993586 34.906 2 0.158605650564633 0.0007870916961826052 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000275663|ENST00000611444|H4C7'] 53845 11074 KYGNLSNYL True NCI_RA007_Epitope_Rep5 1070.53965972418 1070.53856993586 49.229 2 0.15860078612822948 0.0007870916961826052 0.9438714419765777 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'FLT1|p.C1110Afs*4|1|0.45|ENSG00000102755|chr13:28317556-28317556|A/-|frameshift_variant', 'ENST00000451650.1_1_3:46184698-46185163:-|nuORF'] 34499 7374 GQDVGRYQV True PC9_epitope_Rep2 1020.49885754136 1020.49776993586 33.745 2 0.15860025768968972 0.0007870916961826052 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 43992 13449 ILHENFTTV True PC9_epitope_Rep2 1072.55530978832 1072.5542099358602 57.011 2 0.15858608696537868 0.0007870916961826052 0.9438714419765777 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 113724 9062 TRDEVDATL True PC9_epitope_Rep1 1018.4931034545799 1018.49200993586 39.707 2 0.15858384151212526 0.0007870916961826052 0.9438714419765777 ['ENST00000521795.1_1_8:120865268-120868035:-|nuORF', 'ENSG00000136982|ENST00000313655|DSCC1'] 123118 18545 VHDEGVWAL True PC9_epitope_Rep3 1024.4977949121999 1024.49668993586 76.553 2 0.15858060176200578 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 54417 17203 KYSNMEQSLF True PC9_epitope_Rep1 1245.5699738762899 1245.5688699358602 70.99 2 0.15857798484938015 0.0007870916961826052 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 46201 6016 ITDKNSLAY True H1975_Epitope_Rep2 1023.52367530687 1023.5225699358599 28.12 2 0.15857497770349624 0.0007870916961826052 0.9438714419765777 ['ENSG00000163510|ENST00000410053|CWC22'] 27106 18582 FLQEGDLISA True PC9_epitope_Rep6 1091.54989005471 1091.5487899358602 84.117 2 0.15857479151196122 0.0007870916961826052 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 47270 23081 IYEPNFIFF True PC9_epitope_Rep4 1188.5855472874398 1188.5844499358602 97.003 2 0.15856357253877498 0.0007870916961826052 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 8590 18940 AVAELNYGL True PC9_epitope_Rep4 948.4916469026 948.49054993586 80.94 2 0.15855718058388932 0.0007870916961826052 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 111326 20842 TLIDLPGITKV True PC9_epitope_Rep3 1168.70672504928 1168.70562993586 85.44 2 0.1585564611190687 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3'] 26191 11220 FHSGGYGQDAL True PC9_epitope_Rep1 1150.50433684462 1150.5032299358602 48.038 2 0.15854829173375104 0.0007870916961826052 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 61320 7459 LLEDKHFQSY True H1975_Epitope_Rep1 1278.6244519773 1278.62334993586 33.688 2 0.1585470708189347 0.0007870916961826052 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 116826 14513 TYMGHTGAVW True PC9_epitope_Rep1 1121.4964150132098 1121.4953099358602 60.648 2 0.15854689780703904 0.0007870916961826052 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 47906 13583 IYVNPANTHQF True PC9_epitope_Rep5 1302.6356853673399 1302.63458993586 57.27 2 0.15854384030823132 0.0007870916961826052 0.9438714419765777 ['ENSG00000132716|ENST00000368074|DCAF8'] 76791 5603 NVDPVQHTY True H1975_Epitope_Rep2 1071.4985231881901 1071.49742993586 26.554 2 0.1585427006794116 0.0007870916961826052 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 107215 20277 SYPDNFLHI True PC9_epitope_Rep5 1104.52400966004 1104.52290993586 83.046 2 0.15854236780383155 0.0007870916961826052 0.9438714419765777 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 140669 15114 YYPSTPGRYSI True PC9_epitope_Rep3 1302.6244519773 1302.62334993586 63.273 2 0.15854061141611062 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 53844 11013 KYGNLSNYL True NCI_RA007_Epitope_Rep4 1070.53965972418 1070.53856993586 49.229 2 0.15853495514683566 0.0007870916961826052 0.9438714419765777 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'FLT1|p.C1110Afs*4|1|0.45|ENSG00000102755|chr13:28317556-28317556|A/-|frameshift_variant', 'ENST00000451650.1_1_3:46184698-46185163:-|nuORF'] 116629 15478 TYHPGVPVF True PC9_epitope_Rep4 1015.5127167003499 1015.51160993586 67.463 2 0.15853364352658564 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1', 'ENST00000533739.1_1_11:89951170-89956122:-|nuORF', 'ENST00000533724.5_1_11:89947115-89956122:-|nuORF', 'ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 110047 16962 THYDHVLIEL True PC9_epitope_Rep2 1238.6295373577398 1238.62789490379 70.492 3 0.15853279898128939 0.0007870916961826052 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 69839 12506 LYADVGGKQF True PC9_epitope_Rep4 1096.55530978832 1096.5542099358602 55.921 2 0.15852366032687995 0.0007870916961826052 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 45991 10164 ISTEVNPKL True PC9_epitope_Rep2 999.56006081559 999.55896993586 44.433 2 0.1585190511564236 0.0007870916961826052 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 17397 14017 EHFNGVAEL True PC9_epitope_Rep5 1014.4770594676198 1014.47596993586 58.934 2 0.15851886896116693 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5A|p.E251Q|1|0.1|ENSG00000066027|chr1:212347393-212347393|G/C|missense_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E'] 24674 7359 FATHAAALSVR True PC9_epitope_Rep2 1142.6196413803798 1142.61799490379 33.687 3 0.1585173812333847 0.0007870916961826052 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 132496 10092 VYPEKLATKF True PC9_epitope_Rep6 1194.6648602372995 1194.66322490379 49.423 3 0.15850491575002634 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 115279 13171 TVDNARIVL True PC9_epitope_Rep5 999.5712942056299 999.57018993586 55.667 2 0.1585010538217822 0.0007870916961826052 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 26504 20089 FISPFGHGL True PC9_epitope_Rep5 973.5021520166499 973.50104993586 82.323 2 0.15849693690163677 0.0007870916961826052 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000577440.5_1_17:56598198-56609324:-|nuORF', 'ENST00000584488.5_1_17:56598198-56606616:-|nuORF', 'ENSG00000184702|ENST00000455784|SEPTIN5', 'nc|ENSG00000284874|Q99719-2|SEPTIN5'] 2485 4265 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 21.523 2 0.15849609760552213 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 107529 10858 TADHNLLLY True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 46.724 2 0.15849417802099142 0.0007870916961826052 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 35651 5225 GTMKAQGVLLK True NCI_RA007_Epitope_Rep5 1144.6638146914797 1144.66216490379 26.795 3 0.15849358604360744 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000166482|P55083-2|MFAP4'] 136923 9588 YKDPTNIQL True NCI_RA007_Epitope_Rep5 1090.56587447202 1090.56476993586 43.524 2 0.1584883569091534 0.0007870916961826052 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1'] 113487 15046 TQSELATAL True PC9_epitope_Rep2 932.4814761417199 932.48036993586 63.133 2 0.15848691827752895 0.0007870916961826052 0.9438714419765777 ['ENSG00000138629|ENST00000395081|UBL7'] 70507 11877 LYTEKFEEF True NCI_RA007_Epitope_Rep5 1204.5652057656796 1204.5641099358602 52.34 2 0.158482108900131 0.0007870916961826052 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 72098 16000 MRDPIRILV True PC9_epitope_Rep4 1111.65358436095 1111.65248993586 69.476 2 0.15848152006898455 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 131299 19052 VVQPLLVSV True PC9_epitope_Rep6 952.5957180483199 952.59462993586 85.927 2 0.158477659698618 0.0007870916961826052 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 6287 6380 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 29.348 2 0.1584762736942047 0.0007870916961826052 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 93446 6002 RSDPGGGGLAY True H1975_Epitope_Rep2 1048.49377216092 1048.49266993586 28.065 2 0.15847582112185665 0.0007870916961826052 0.9438714419765777 ['ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF'] 47478 18293 IYKFITERF True PC9_epitope_Rep1 1215.6651945904698 1215.66355490379 75.153 3 0.1584703558771463 0.0007870916961826052 0.9438714419765777 ['ENSG00000178919|ENST00000375123|FOXE1'] 45269 7545 IRYPDSHQL True PC9_epitope_Rep4 1127.57235683479 1127.57071490379 36.391 3 0.15846746234124112 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 131707 18402 VWSDVTPLTF True NCI_RA007_Epitope_Rep5 1163.58627556343 1163.5851699358602 77.593 2 0.15846133447262015 0.0007870916961826052 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 76505 11742 NTDIAENLY True H1975_Epitope_Rep2 1051.48220441771 1051.48110993586 50.241 2 0.15846015827968377 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 35623 4587 GTLNQPLTK True NCI_RA007_Epitope_Rep3 970.54474510462 970.54364993586 24.937 2 0.1584563793746997 0.0007870916961826052 0.9438714419765777 ['ENSG00000103671|ENST00000261884|TRIP4'] 47422 8850 IYIKQIKTF True NCI_RA007_Epitope_Rep5 1152.6906810623198 1152.6890249037901 40.706 3 0.1584523484907014 0.0007870916961826052 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 2368 10339 AEQFKLIQA True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 44.777 2 0.15844685948688308 0.0007870916961826052 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 8895 20599 AVGELLQEV True PC9_epitope_Rep5 956.51786165044 956.51676993586 84.281 2 0.1584465772627303 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 73906 10514 NHHMQSISF True PC9_epitope_Rep5 1099.4869129586702 1099.48580993586 45.429 2 0.15844227178437675 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 103056 17514 SQLEDAIRL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 72.627 2 0.15844123228038007 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 84067 8937 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 39.374 2 0.1584382744459633 0.0007870916961826052 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 75475 16551 NQIKEFIYA True PC9_epitope_Rep5 1124.5866099165999 1124.58550993586 68.667 2 0.15843454898784998 0.0007870916961826052 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 49550 5468 KKHMTAIQL True NCI_RA007_Epitope_Rep4 1068.6113851957998 1068.61028993586 27.615 2 0.15843362413952025 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1'] 83121 19001 PYPPPPPEF True PC9_epitope_Rep2 1039.5014833103098 1039.50038993586 78.453 2 0.15842622792421737 0.0007870916961826052 0.9438714419765777 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 8693 11597 AVDAVIAELK True NCI_RA007_Epitope_Rep2 1027.5913609438699 1027.59026993586 49.7 2 0.15841058549364476 0.0007870916961826052 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 94970 20547 RYPTSIASLAF True PC9_epitope_Rep1 1224.65027280232 1224.64916993586 83.846 2 0.15840962449812615 0.0007870916961826052 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 103661 14210 SRDPIVMGV True PC9_epitope_Rep1 972.50625142092 972.50514993586 59.481 2 0.1584079290765453 0.0007870916961826052 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 31871 5184 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 25.013 2 0.15840510591459334 0.0007870916961826052 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 21599 18351 ERSNDYFVL True PC9_epitope_Rep2 1141.54038800017 1141.53928993586 75.918 2 0.1583836810652244 0.0007870916961826052 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.R30G|1|0.06|ENSG00000133138|chrX:106802941-106802941|C/G|missense_variant'] 24796 9998 FC[Carbamidomethyl]GGSLINSQ True H1975_Epitope_Rep1 1081.48624453176 1081.4851499358601 43.393 2 0.1583815189422436 0.0007870916961826052 0.9438714419765777 ['CON__P00761'] 107782 19745 TAM[Oxidation]DVVYAL True PC9_epitope_Rep5 997.4790339940099 997.47792993586 80.994 2 0.15837901903073923 0.0007870916961826052 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 75212 8846 NPEPELLVR True H1975_Epitope_Rep1 1065.58185888933 1065.5807699358602 38.948 2 0.15837892285236777 0.0007870916961826052 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 46177 8492 ITDHGSLIY True H1975_Epitope_Rep1 1017.51311062317 1017.51200993586 37.594 2 0.15837834032064038 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 40009 5685 HQSSVGSVL True NCI_RA007_Epitope_Rep3 912.46649478392 912.46538993586 29.343 2 0.15837793229160674 0.0007870916961826052 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 46947 11553 IVLQIDNAR True PC9_epitope_Rep4 1040.5978433066398 1040.59674993586 52.199 2 0.15837468770582838 0.0007870916961826052 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001', 'CON__Q6IFX2', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000427733.1_1_13:90882929-90883235:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 52326 10044 KPANVFITA True PC9_epitope_Rep6 959.54401682863 959.54290993586 49.216 2 0.15837408019554933 0.0007870916961826052 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 105456 16225 SVASELEKI True PC9_epitope_Rep2 974.5284263341399 974.5273299358599 67.656 2 0.1583737536166393 0.0007870916961826052 0.9438714419765777 ['ENSG00000172244|ENST00000306862|C5orf34'] 84831 11922 QHLQATGVSL True PC9_epitope_Rep3 1052.56145779792 1052.56036993586 50.879 2 0.15837083162764587 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 27103 19740 FLQEGDLISA True PC9_epitope_Rep4 1091.54989005471 1091.54937496793 84.053 1 0.15836954278938345 0.0007870916961826052 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 9753 11889 AYLEAIHNF True NCI_RA007_Epitope_Rep4 1076.52909504048 1076.5279899358602 52.727 2 0.1583672673983692 0.0007870916961826052 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 111040 15634 TLDPQTGLFY True H1975_Epitope_Rep2 1153.5655401188499 1153.5649749679299 65.29 1 0.15836366322272183 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 98832 10901 SITSVFITK True NCI_RA007_Epitope_Rep4 994.5698972233 994.56880993586 48.79 2 0.15835884490386937 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 138335 9167 YRAPGTPTY True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 40.208 2 0.1583509445096153 0.0007870916961826052 0.9438714419765777 ['ENSG00000152102|ENST00000389915|FAM168B'] 73811 11225 NHDTGEYVL True PC9_epitope_Rep3 1046.46688870674 1046.4657899358601 48.185 2 0.1583454707862335 0.0007870916961826052 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 138835 8809 YSDKYGLGY True H1975_Epitope_Rep3 1064.48147614172 1064.4803699358602 38.891 2 0.15834261934681157 0.0007870916961826052 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 88289 18463 QYIEELQKF True PC9_epitope_Rep5 1196.6077392839995 1196.60664993586 76.039 2 0.15834090350640168 0.0007870916961826052 0.9438714419765777 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 90925 10391 RLELTELEA True H1975_Epitope_Rep1 1072.57643915572 1072.57534993586 44.919 2 0.15833203700649018 0.0007870916961826052 0.9438714419765777 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'ENST00000418039.2_1_15:78290504-78290759:-|nuORF', 'ENST00000491479.1_1_15:78290504-78294097:-|nuORF'] 135446 8392 YEAADKWVA True H1975_Epitope_Rep2 1051.4974605590298 1051.49636993586 37.233 2 0.15833007322302226 0.0007870916961826052 0.9438714419765777 ['ENST00000496594.5_1_9:130883426-130884979:-|nuORF', 'ENSG00000148334|ENST00000338961|PTGES2'] 64195 8613 LQIDNARLA True H1975_Epitope_Rep2 1012.5665431783599 1012.56544993586 38.086 2 0.15832963673936884 0.0007870916961826052 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000520711.1_1_8:41368829-41369321:+|nuORF', 'ENST00000527480.1_1_11:6015523-6015940:-|nuORF', 'ENST00000425692.6_1_17:16723399-16724021:-|nuORF', 'ENST00000417510.5_1_17:16723399-16724042:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 74219 12252 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.4842749679299 52.209 1 0.15832826832236857 0.0007870916961826052 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 44853 19670 IPYHIVNIV True PC9_epitope_Rep5 1066.6175161220601 1066.61640993586 80.715 2 0.15832301908015356 0.0007870916961826052 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 102969 8855 SQIQEFKEA True PC9_epitope_Rep3 1078.5294889632999 1078.52838993586 39.012 2 0.15832258958264103 0.0007870916961826052 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 91749 8878 RPKPIITSV True PC9_epitope_Rep1 1009.62841515893 1009.62730993586 38.988 2 0.1583223512594423 0.0007870916961826052 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 108456 14137 TEELPQLINA True H1975_Epitope_Rep3 1126.5870038394198 1126.5859099358602 59.709 2 0.15832174582447972 0.0007870916961826052 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 67271 4604 LTDNGRHITY True H1975_Epitope_Rep3 1188.58873517492 1188.5870849037901 22.832 3 0.1583161089450455 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 97779 8750 SHHENLVSF True PC9_epitope_Rep4 1068.49885754136 1068.49776993586 41.163 2 0.15831397783202036 0.0007870916961826052 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 97541 6039 SGTSEFLNK True PC9_epitope_Rep6 981.4767251144499 981.47562993586 31.583 2 0.1583054036656613 0.0007870916961826052 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 88091 19197 QVVPVLVHL True PC9_epitope_Rep4 1002.6226015025 1002.62150993586 81.94 2 0.15830387272740962 0.0007870916961826052 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 125153 17239 VLPSVLNKF True PC9_epitope_Rep6 1015.60661708519 1015.60552993586 78.908 2 0.15830032076173423 0.0007870916961826052 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 7030 5066 AQSGHEVTL True NCI_RA007_Epitope_Rep4 940.46140940348 940.46030993586 25.988 2 0.1582993655332649 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'EPS15L1|p.F303Lfs*11|1|0.25|ENSG00000127527|chr19:16421360-16421360|G/-|frameshift_variant', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1', 'ENST00000597559.5_1_19:16547732-16582756:-|nuORF'] 23990 9469 EYPDRIM[Oxidation]NTF True NCI_RA007_Epitope_Rep3 1300.57578791316 1300.57468993586 44.348 2 0.15829480185218286 0.0007870916961826052 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 35703 5010 GTQTVFPSK True NCI_RA007_Epitope_Rep3 963.5025459394699 963.50144993586 26.704 2 0.1582886598214802 0.0007870916961826052 0.9438714419765777 ['ENSG00000156463|ENST00000359120|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-3|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-2|SH3RF2', 'ENST00000511705.1_1_5:145435703-145442261:+|nuORF'] 99912 22112 SLIADLEQL True PC9_epitope_Rep4 1000.5440763982799 1000.54357496793 93.271 1 0.15828762248920447 0.0007870916961826052 0.9438714419765777 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 86706 8299 QRIDSDDAL True PC9_epitope_Rep5 1031.4883524273098 1031.48724993586 36.861 2 0.1582850489334797 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 721 6491 AAVNHISQL True H1975_Epitope_Rep2 951.51377932951 951.51268993586 29.884 2 0.15828264388833832 0.0007870916961826052 0.9438714419765777 ['ENSG00000120029|ENST00000370033|ARMH3', 'ENST00000495001.1_1_10:103607287-103649300:-|nuORF', 'nc|ENSG00000120029|Q5T2E6-2|ARMH3'] 21603 19065 ERSNDYFVL True PC9_epitope_Rep5 1141.54038800017 1141.53928993586 78.363 2 0.15827902055086915 0.0007870916961826052 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.R30G|1|0.06|ENSG00000133138|chrX:106802941-106802941|C/G|missense_variant'] 68410 12819 LTTEVHPEL True PC9_epitope_Rep3 1037.5393253710097 1037.53822993586 54.329 2 0.1582770456796303 0.0007870916961826052 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 9217 7709 AVPTNIIAAK True NCI_RA007_Epitope_Rep4 996.5967806774798 996.59568993586 36.323 2 0.15827428350560255 0.0007870916961826052 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 127242 21396 VQIPFFAKL True PC9_epitope_Rep2 1061.62735252977 1061.6262499358602 87.77 2 0.15826801992688505 0.0007870916961826052 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD'] 115429 19262 TVFDEAIRAV True PC9_epitope_Rep4 1119.59242357303 1119.5913299358601 82.194 2 0.15826453067275556 0.0007870916961826052 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 114002 19139 TRLPTPVLL True PC9_epitope_Rep2 1008.6331661861999 1008.63206993586 78.988 2 0.1582474662167122 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 103650 14163 SRDMTMFVT True PC9_epitope_Rep4 1086.48380172418 1086.4827099358602 62.383 2 0.1582381446721841 0.0007870916961826052 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 34920 18735 GQWASVIRV True PC9_epitope_Rep3 1014.5610638750999 1014.55996993586 77.286 2 0.15823662538032351 0.0007870916961826052 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 14444 12809 DTNADKQLSF True PC9_epitope_Rep3 1137.53021723929 1137.52912993586 54.291 2 0.1582346241413891 0.0007870916961826052 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 81531 12693 PQVSALLGEED True H1975_Epitope_Rep1 1156.5611830144 1156.56008993586 53.88 2 0.1582289179645372 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF'] 6614 19163 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 78.747 2 0.1582249700274052 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 88912 4520 RECTIEATA True NCI_RA007_Epitope_Rep3 992.4596951513198 992.45858993586 24.637 2 0.1582191236431624 0.0007870916961826052 0.9438714419765777 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 70405 19150 LYQHEINLF True PC9_epitope_Rep2 1175.5975089534697 1175.59640993586 79.031 2 0.15821349841044233 0.0007870916961826052 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 129835 20127 VTLGPVPEI True PC9_epitope_Rep4 923.53278343859 923.5322349679301 85.553 1 0.158205112286605 0.0007870916961826052 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 38911 20219 HILDFSPSL True PC9_epitope_Rep2 1027.5338460677501 1027.53274993586 83.19 2 0.15820447185122946 0.0007870916961826052 0.9438714419765777 ['ENSG00000124702|ENST00000326974|KLHDC3'] 128385 8455 VSDSGISTDY True H1975_Epitope_Rep2 1042.44548455582 1042.44497496793 37.475 1 0.15819835108309024 0.0007870916961826052 0.9438714419765777 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 16179 9814 EEEYPGITA True H1975_Epitope_Rep1 1007.4447562798298 1007.44417496793 42.678 1 0.15819708228897572 0.0007870916961826052 0.9438714419765777 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 91161 16384 RLPETLPSL True PC9_epitope_Rep6 1024.59169529704 1024.5905899358602 75.408 2 0.15819493441001165 0.0007870916961826052 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 24673 8836 FATHAAALSVR True PC9_epitope_Rep1 1142.6196413803798 1142.61799490379 38.83 3 0.1581908314886384 0.0007870916961826052 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 73880 10156 NHHLFTTTI True PC9_epitope_Rep6 1082.5508931142201 1082.5497899358602 49.691 2 0.15818789898884272 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 33397 18952 GLFIIDDK True PC9_epitope_Rep1 919.5014833103099 919.50038993586 77.682 2 0.15818738551404832 0.0007870916961826052 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 72125 18051 MREDVAEGLTL True PC9_epitope_Rep5 1232.6070876609997 1232.6059899358602 74.447 2 0.15818390334249485 0.0007870916961826052 0.9438714419765777 ['ENST00000579248.5_2_18:47017953-47018809:-|nuORF'] 43969 10214 ILGATIENSR True PC9_epitope_Rep5 1072.58767254576 1072.58656993586 44.276 2 0.15818305078235306 0.0007870916961826052 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 96506 5165 SELEMAKA True NCI_RA007_Epitope_Rep4 877.4215187374499 877.4204299358599 26.391 2 0.1581673962246902 0.0007870916961826052 0.9438714419765777 ['ENSG00000267796|ENST00000301159|LIN37'] 85487 19293 QLIDIIHTA True PC9_epitope_Rep5 1022.5760452329 1022.57494993586 79.254 2 0.15816140344447727 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 47683 21327 IYPSPTGVLI True PC9_epitope_Rep5 1058.60119735158 1058.60067496793 87.091 1 0.15816055239896115 0.0007870916961826052 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 86971 15953 QRVPLSVQL True PC9_epitope_Rep2 1038.61857875122 1038.61748993586 66.61 2 0.1581578574209967 0.0007870916961826052 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 120846 7613 VGDPHTVTV True PC9_epitope_Rep5 923.47124581119 923.47014993586 34.231 2 0.1581572860900973 0.0007870916961826052 0.9438714419765777 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 140337 9541 YYEEQHPEL True PC9_epitope_Rep6 1206.5193182024198 1206.51822993586 46.982 2 0.15815423429306896 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 11889 16522 DHQLIQEAL True PC9_epitope_Rep1 1065.54547338061 1065.54436993586 68.376 2 0.15815143458112899 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 34822 19327 GQVEDVVGNL True PC9_epitope_Rep2 1028.5138388991597 1028.51274993586 79.716 2 0.1581501212280056 0.0007870916961826052 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 21591 4205 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 23.137 2 0.15814690847535978 0.0007870916961826052 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 105560 10117 SVDSHFQEV True PC9_epitope_Rep5 1046.4668887067398 1046.4657899358601 43.899 2 0.15814039136549068 0.0007870916961826052 0.9438714419765777 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 108809 13913 TEQLLDDVVA True H1975_Epitope_Rep2 1101.55536935797 1101.55426993586 58.663 2 0.15813232761440651 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 107913 21705 TAVPSLFSV True PC9_epitope_Rep2 919.50148331031 919.50038993586 88.965 2 0.1581294661836644 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1'] 53611 19946 KVYLEDGFAYV True PC9_epitope_Rep2 1302.6496040959798 1302.6485099358601 82.121 2 0.15811754820528776 0.0007870916961826052 0.9438714419765777 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 89504 7381 REQQLAEIEA True H1975_Epitope_Rep3 1185.5989655054498 1185.5978699358602 33.37 2 0.1581106874575532 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2'] 131973 19469 VYGFLRNGF True PC9_epitope_Rep2 1071.5501648382299 1071.5490699358602 80.267 2 0.15809810751985387 0.0007870916961826052 0.9438714419765777 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 97780 10991 SHHENLVSF True PC9_epitope_Rep5 1068.49885754136 1068.49776993586 47.266 2 0.15809577298479796 0.0007870916961826052 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 94954 12955 RYPSNLQLF True NCI_RA007_Epitope_Rep5 1136.59784330664 1136.59674993586 56.511 2 0.15809379680936939 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557627.1_1_14:20869071-20871634:-|nuORF'] 67821 22786 LTIEDGIFEV True PC9_epitope_Rep3 1134.58085582982 1134.57974993586 92.917 2 0.15809262347297615 0.0007870916961826052 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 93449 5869 RSDPNSESLY True H1975_Epitope_Rep3 1166.52038083158 1166.5192899358601 27.586 2 0.15808871775323094 0.0007870916961826052 0.9438714419765777 ['SECISBP2L|p.A823Qfs*12|1|0.13|ENSG00000138593|chr15:48996524-48996524|A/-|frameshift_variant', 'ENSG00000138593|ENST00000559471|SECISBP2L', 'SECISBP2L|p.P614Hfs*12|1|0.22|ENSG00000138593|chr15:49011754-49011754|G/-|frameshift_variant'] 42382 5747 IENIQRVAA True NCI_RA007_Epitope_Rep3 1012.5665431783599 1012.56544993586 29.584 2 0.15808223704399213 0.0007870916961826052 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 128198 8499 VRTPYTM[Oxidation]SY True PC9_epitope_Rep2 1132.52229578832 1132.52118993586 38.055 2 0.15808101875413696 0.0007870916961826052 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 28845 10368 FTDPGQVAY True H1975_Epitope_Rep1 996.4552613938799 996.45471496793 44.829 1 0.15807801286957196 0.0007870916961826052 0.9438714419765777 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 134954 15732 YAFNMKATV True PC9_epitope_Rep5 1043.5110024481899 1043.5099099358602 65.512 2 0.15807412620090247 0.0007870916961826052 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant'] 40135 13508 HRDSGILGL True PC9_epitope_Rep5 966.5246783663799 966.52358993586 56.978 2 0.15804504873159617 0.0007870916961826052 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 113157 20048 TQDAVPLTL True PC9_epitope_Rep3 956.51786165044 956.51676993586 82.364 2 0.15804266873427353 0.0008295110764126086 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 65331 9442 LSELKPMSY True H1975_Epitope_Rep2 1066.53688284286 1066.53578993586 41.286 2 0.1580372303677207 0.0008295110764126086 0.9438714419765777 ['ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 21081 9469 ERDPATYNI True PC9_epitope_Rep2 1077.5090878718902 1077.50798993586 41.76 2 0.15803609601046467 0.0008295110764126086 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 96230 4930 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 24.046 1 0.15802930558563694 0.0008295110764126086 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 89060 8429 REELFIVSK True NCI_RA007_Epitope_Rep1 1119.62880908175 1119.6277099358601 36.789 2 0.15802569310824913 0.0008295110764126086 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 9827 18939 AYLKGTVLF True PC9_epitope_Rep2 1010.5800679841799 1010.57896993586 78.213 2 0.15801707389994282 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 39224 12650 HLIGDFSKV True PC9_epitope_Rep2 1014.54983048506 1014.54872993586 53.966 2 0.1580157815951286 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000158402|P30307-4|CDC25C', 'nc|ENSG00000158402|P30307-3|CDC25C', 'nc|ENSG00000158402|P30307-2|CDC25C', 'ENSG00000158402|ENST00000323760|CDC25C'] 21152 20092 ERDTYMLLL True PC9_epitope_Rep4 1152.58489566444 1152.58378993586 85.416 2 0.15801211115599784 0.0008295110764126086 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 22437 11927 ETFSYPESY True H1975_Epitope_Rep3 1121.4553209635299 1121.45477496793 51.031 1 0.15799761432155504 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000047634|Q9UN30-2|SCML1', 'nc|ENSG00000047634|Q9UN30-1|SCML1', 'ENSG00000047634|ENST00000380041|SCML1'] 117191 13340 TYTDVTPRQF True PC9_epitope_Rep5 1226.59315184902 1226.5920499358601 56.327 2 0.15799134143712648 0.0008295110764126086 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 103967 15619 SRQTQDWVL True PC9_epitope_Rep5 1131.56727145435 1131.5661699358602 65.089 2 0.15799053420347825 0.0008295110764126086 0.9438714419765777 ['ENSG00000143375|ENST00000271636|CGN', 'nc|ENSG00000143375|Q9P2M7-2|CGN'] 72165 22279 MRLLSFVVL True PC9_epitope_Rep2 1076.64162269492 1076.64052993586 91.173 2 0.1579872403112312 0.0008295110764126086 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF', 'chr1:156020167-156020337|162|12.83|0.31|5.36|-|0|SSR2,None|1'] 29320 21462 FVDPVLNQL True PC9_epitope_Rep3 1043.56514619603 1043.56404993586 87.845 2 0.15798459349973862 0.0008295110764126086 0.9438714419765777 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C'] 54141 16305 KYNANFVTF True PC9_epitope_Rep4 1102.54474510462 1102.54364993586 70.677 2 0.157980493438392 0.0008295110764126086 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 94415 19119 RYFDVGLHNF True PC9_epitope_Rep5 1266.6145559999397 1266.6129149037902 78.574 3 0.1579791024579391 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000054392|Q5VTY9-6|HHAT', 'nc|ENSG00000054392|Q5VTY9-5|HHAT', 'nc|ENSG00000054392|Q5VTY9-2|HHAT', 'ENSG00000054392|ENST00000261458|HHAT', 'nc|ENSG00000054392|Q5VTY9-7|HHAT', 'nc|ENSG00000054392|Q5VTY9-3|HHAT'] 94661 8743 RYLEKPMEI True NCI_RA007_Epitope_Rep2 1177.6165301458898 1177.6154299358602 38.654 2 0.1579782588922339 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 132985 20253 VYVEKISFL True PC9_epitope_Rep5 1096.6168474157198 1096.61574993586 82.952 2 0.15797804063529952 0.0008295110764126086 0.9438714419765777 ['ENSG00000171017|ENST00000306708|LRRC8E'] 7082 5824 AQYDASELK True NCI_RA007_Epitope_Rep2 1023.48728979815 1023.4861899358599 27.272 2 0.15796997852249303 0.0008295110764126086 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 7321 12661 ARSELLTTV True PC9_epitope_Rep3 988.55530978832 988.55420993586 53.725 2 0.15796169674557434 0.0008295110764126086 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 34967 5158 GQYGNPLNK True NCI_RA007_Epitope_Rep3 989.4930438849299 989.49194993586 27.283 2 0.15796052946219052 0.0008295110764126086 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000558733.5_1_15:58947546-59041769:-|nuORF', 'ENST00000560608.5_1_15:58971480-59041769:-|nuORF', 'ENST00000561149.1_1_15:58974496-59041769:-|nuORF'] 103620 15852 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.60010993586 65.966 2 0.15795372292704365 0.0008295110764126086 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 28777 11349 FTDEEGYGRYL True H1975_Epitope_Rep3 1348.59354577184 1348.59244993586 48.766 2 0.157951790391681 0.0008295110764126086 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3471092-3471287:-|nuORF'] 103276 14964 SQTKVVELL True PC9_epitope_Rep5 1015.5913609438699 1015.59026993586 62.561 2 0.1579382175199239 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 95396 8726 SAINEVVTR True PC9_epitope_Rep5 987.53490869691 987.53380993586 38.506 2 0.15793777349472052 0.0008295110764126086 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 140851 15143 YYTDIM[Oxidation]HTL True PC9_epitope_Rep5 1171.5219614351497 1171.5208699358602 63.255 2 0.1579359951488495 0.0008295110764126086 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 60555 11526 LIQDRVAEV True PC9_epitope_Rep5 1041.5818588893299 1041.5807699358602 49.332 2 0.15793260512101454 0.0008295110764126086 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 13304 11355 DLYLENPEIK True H1975_Epitope_Rep3 1232.6288686514001 1232.6277699358602 48.788 2 0.157932078369864 0.0008295110764126086 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 116778 13426 TYLPAPEGLKF True NCI_RA007_Epitope_Rep3 1234.65977485686 1234.6586699358602 60.087 2 0.15793194203604843 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 109633 14388 THDITTISI True PC9_epitope_Rep4 999.52367530687 999.52256993586 63.253 2 0.15792849316240792 0.0008295110764126086 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 21074 10775 ERDMSNVSL True PC9_epitope_Rep5 1049.48115887189 1049.48006993586 46.437 2 0.157921983767497 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 110101 7548 TIAPALVSK True NCI_RA007_Epitope_Rep2 898.5487678559 898.54766993586 33.986 2 0.1579178684301816 0.0008295110764126086 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 26666 18070 FLASESLIKQI True PC9_epitope_Rep6 1247.71253870571 1247.7114499358602 82.137 2 0.15791064387912881 0.0008295110764126086 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 41088 11605 HYLPDLHHL True PC9_epitope_Rep4 1143.5825275956702 1143.5808749037901 52.399 3 0.15790918758606906 0.0008295110764126086 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 103623 15879 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.59957490379 66.068 3 0.15790565586574842 0.0008295110764126086 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 137169 15203 YLDQMEDLY True H1975_Epitope_Rep2 1188.50089125696 1188.49978993586 63.634 2 0.15790213120181043 0.0008295110764126086 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3'] 129239 8309 VTDMSDAEQY True H1975_Epitope_Rep2 1157.45466934053 1157.45356993586 36.912 2 0.15789824066735308 0.0008295110764126086 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 123121 16854 VHDEGVWAL True PC9_epitope_Rep4 1024.4977949121999 1024.49668993586 72.81 2 0.15789698882442801 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 107189 21046 SYNVTSVLF True PC9_epitope_Rep4 1028.51786165044 1028.51676993586 89.112 2 0.1578930334735421 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant'] 2497 12966 AEQPYFIEA True H1975_Epitope_Rep1 1066.49712620586 1066.49657496793 54.95 1 0.15788845892340847 0.0008295110764126086 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B'] 114925 11722 TTEVVNELY True H1975_Epitope_Rep3 1066.51825557326 1066.51714993586 50.229 2 0.15788631204035147 0.0008295110764126086 0.9438714419765777 ['ENSG00000113719|ENST00000393784|ERGIC1', 'ERGIC1-RANBP17|1|fusion', 'ERGIC1-RANBP17|2|fusion'] 6298 5054 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 24.812 2 0.15788613279755911 0.0008295110764126086 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 31656 10345 GEHTLLVTV True H1975_Epitope_Rep2 967.5338460677499 967.53274993586 44.8 2 0.15788452731455657 0.0008295110764126086 0.9438714419765777 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 1563 5737 AEFAERTVA True H1975_Epitope_Rep3 992.4927095317599 992.49160993586 27.097 2 0.15788352278556853 0.0008295110764126086 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 104481 8219 SSNIFTVAK True NCI_RA007_Epitope_Rep4 965.51819600361 965.51708993586 38.402 2 0.15787606790377767 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'ENST00000482818.1_1_22:29726183-29727937:-|nuORF'] 138264 16635 YQVGVHYEL True PC9_epitope_Rep3 1106.5396597241802 1106.53856993586 69.122 2 0.15787452145592862 0.0008295110764126086 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 39844 10895 HQGPATTVAF True PC9_epitope_Rep1 1027.50869394907 1027.50758993586 46.792 2 0.15787446321498075 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 11806 19552 DHLLSVSL True PC9_epitope_Rep1 882.4810822189 882.47998993586 80.031 2 0.15787332365905177 0.0008295110764126086 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 9049 18934 AVIPRLVQL True PC9_epitope_Rep4 1007.64915060351 1007.64804993586 80.917 2 0.15786194349489896 0.0008295110764126086 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 46510 9159 ITPQTIHGV True PC9_epitope_Rep2 964.5341804209198 964.53308993586 40.569 2 0.15785596386015743 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 114150 9290 TRSPVKVTL True PC9_epitope_Rep3 999.60767971435 999.60658993586 40.675 2 0.15784177452623488 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 43775 22100 IIYPGAFVDL True PC9_epitope_Rep4 1106.60119735158 1106.60010993586 93.224 2 0.15784126207242438 0.0008295110764126086 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 56202 15579 LDPHLVLDQL True H1975_Epitope_Rep3 1161.6393737654498 1161.63826993586 65.342 2 0.1578379874872516 0.0008295110764126086 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 86956 8726 QRVDSPVTV True PC9_epitope_Rep2 999.5349086969098 999.53380993586 38.926 2 0.15783610181425384 0.0008295110764126086 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 8977 12012 AVHEDIVAV True PC9_epitope_Rep1 951.5025459394699 951.50144993586 51.065 2 0.15782338738744123 0.0008295110764126086 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 45167 18168 IRDNLAISL True PC9_epitope_Rep5 1013.58694426977 1013.58584993586 74.892 2 0.15782300517693382 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 125592 19506 VMAPRALLL True PC9_epitope_Rep1 982.5997578829398 982.59866993586 79.848 2 0.15782209850869125 0.0008295110764126086 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENST00000484378.1_1_6:31239370-31239848:-|nuORF'] 107429 7217 SYTSVKENF True NCI_RA007_Epitope_Rep5 1073.5029398622898 1073.50184993586 34.439 2 0.15781919609714795 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 52624 10964 KQDSAFSNL True PC9_epitope_Rep1 1008.48762415132 1008.48652993586 47.061 2 0.15781638292769254 0.0008295110764126086 0.9438714419765777 ['ENSG00000071553|ENST00000369762|ATP6AP1'] 74793 20789 NLNPEFISV True PC9_epitope_Rep2 1031.5287606873098 1031.52766993586 85.406 2 0.15781404534332855 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 7533 8273 ASEYDQIRY True H1975_Epitope_Rep3 1143.51965255559 1143.5185499358602 36.803 2 0.15780600872805203 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000064393|Q9H2X6-2|HIPK2', 'nc|ENSG00000064393|Q9H2X6-3|HIPK2', 'ENSG00000064393|ENST00000406875|HIPK2'] 8515 14798 ATVPGLLKV True PC9_epitope_Rep6 896.5695033004799 896.56840993586 68.89 2 0.15780384631379613 0.0008295110764126086 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 8978 11247 AVHEDIVAV True PC9_epitope_Rep2 951.5025459394699 951.50144993586 48.588 2 0.15780231771705355 0.0008295110764126086 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 38432 6729 HGTAQLQAL True NCI_RA007_Epitope_Rep4 937.4981292653698 937.49702993586 32.506 2 0.15780024862082165 0.0008295110764126086 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'ENST00000481797.5_1_1:153721154-153726193:+|nuORF'] 90158 18916 RHDDYLVML True PC9_epitope_Rep5 1160.5648289262 1160.56372993586 77.781 2 0.15779773530290298 0.0008295110764126086 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 72392 6934 M[Oxidation]TEGSTVNTEY True H1975_Epitope_Rep2 1246.50234818938 1246.5012499358602 31.592 2 0.15779516031836882 0.0008295110764126086 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 113662 14974 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61278993586 62.854 2 0.15779063899993356 0.0008295110764126086 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 130444 17094 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 71.001 2 0.1577862364234742 0.0008295110764126086 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 116510 11669 TYDYNFHSF True NCI_RA007_Epitope_Rep4 1192.48253877088 1192.4814499358602 51.844 2 0.15778019989400555 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 48376 9211 KEAIETIVAA True H1975_Epitope_Rep2 1043.5862755634298 1043.5857749679299 40.383 1 0.1577779953433551 0.0008295110764126086 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 7283 20418 ARPPWMWVL True PC9_epitope_Rep6 1154.60590589254 1154.6048099358602 91.242 2 0.15777636400762027 0.0008295110764126086 0.9438714419765777 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 25441 15496 FELPQTPLA True H1975_Epitope_Rep2 1014.5385970950199 1014.53750993586 64.763 2 0.1577750684942357 0.0008295110764126086 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 7215 12743 ARDFTVSAM True PC9_epitope_Rep5 996.4698659121999 996.46876993586 54.022 2 0.1577676067119192 0.0008295110764126086 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 94465 19299 RYGDVFQI True PC9_epitope_Rep1 996.5028802926399 996.50178993586 79.038 2 0.1577647515732827 0.0008295110764126086 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 109715 21835 THFNFAIVF True PC9_epitope_Rep5 1094.5549158654999 1094.55380993586 89.021 2 0.15775787343903463 0.0008295110764126086 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18'] 77274 12940 NYISGIQTI True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52766993586 58.173 2 0.15775469538621448 0.0008295110764126086 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 28186 12292 FRPLYTHEY True PC9_epitope_Rep1 1224.5927579261997 1224.59110490379 52.134 3 0.15774946614479182 0.0008295110764126086 0.9438714419765777 ['ENSG00000008952|ENST00000337002|SEC62'] 47994 18646 KAIDVVVMV True PC9_epitope_Rep5 972.5677890483199 972.56668993586 76.747 2 0.15774668064120875 0.0008295110764126086 0.9438714419765777 ['TRAF3IP1|p.S84T|1|0.25|ENSG00000204104|chr2:238325866-238325866|T/A|missense_variant', 'nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1', 'ENSG00000204104|ENST00000373327|TRAF3IP1'] 26540 8273 FIVGADNVGSK True NCI_RA007_Epitope_Rep2 1105.57677350889 1105.57566993586 36.818 2 0.15774495363480168 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 21086 10137 ERDPATYNI True PC9_epitope_Rep5 1077.5090878718902 1077.50798993586 43.976 2 0.15772944555241095 0.0008295110764126086 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 14277 4380 DSYVGDEAQSK True PC9_epitope_Rep6 1197.51496109797 1197.5138699358602 23.947 2 0.15772904472599364 0.0008295110764126086 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 127517 22990 VQVEDIVFL True PC9_epitope_Rep5 1060.580461907 1060.57936993586 93.422 2 0.15772380133621572 0.0008295110764126086 0.9438714419765777 ['ENSG00000197780|ENST00000338366|TAF13'] 105003 3277 STIGPEGVHQK True NCI_RA007_Epitope_Rep2 1151.5934862021898 1151.5918349037902 17.408 3 0.15772088590435268 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 57561 9434 LELDKPIAA True H1975_Epitope_Rep2 968.5542471591599 968.55314993586 41.255 2 0.15771974524496093 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000491251.1_1_22:30418516-30421787:+|nuORF'] 48609 8284 KEIEYVETV True H1975_Epitope_Rep1 1108.5652057656798 1108.5641099358602 36.796 2 0.15771213658242378 0.0008295110764126086 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 103747 18579 SRFGKYFEI True PC9_epitope_Rep1 1145.58694426977 1145.58584993586 76.251 2 0.15770868348701617 0.0008295110764126086 0.9438714419765777 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'MYO1F|p.A217Pfs*12|1|0.18|ENSG00000142347|chr19:8551862-8551862|C/-|frameshift_variant', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 136133 15955 YGGLIFNSY True H1975_Epitope_Rep2 1032.4916469026 1032.4905499358601 66.568 2 0.1577016243059719 0.0008295110764126086 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 83044 21574 PYLDSFYEY True PC9_epitope_Rep2 1195.5073565363898 1195.50677496793 88.456 1 0.15769788794750278 0.0008295110764126086 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 108583 15401 TEIDSIPPLP True H1975_Epitope_Rep2 1080.5702911461199 1080.56918993586 64.399 2 0.15769630509534524 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 25610 5821 FETLQAQAGK True H1975_Epitope_Rep3 1091.5611234447497 1091.56002993586 27.411 2 0.15768387751684843 0.0008295110764126086 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 24177 11685 EYTPRSWNF True NCI_RA007_Epitope_Rep4 1198.54072235334 1198.5396299358601 51.905 2 0.15768080026633377 0.0008295110764126086 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 8243 23465 ATIIQLFQV True PC9_epitope_Rep1 1031.6015317047497 1031.6004299358601 95.043 2 0.15767017876977452 0.0008295110764126086 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 138896 5141 YSDVHNCSY True H1975_Epitope_Rep2 1086.40765957846 1086.40656993586 24.852 2 0.15767012278707976 0.0008295110764126086 0.9438714419765777 ['ENST00000557983.1_1_15:80423514-80429967:+|nuORF', 'nc|ENSG00000086666|Q6FIF0-2|ZFAND6', 'ENSG00000086666|ENST00000261749|ZFAND6'] 47999 9311 KAINQGGLTSV True PC9_epitope_Rep1 1086.6033226099 1086.6022299358601 40.671 2 0.15766960594404353 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 21275 16511 ERINNINIL True PC9_epitope_Rep2 1097.61930702721 1097.61820993586 68.752 2 0.15766710749731047 0.0008295110764126086 0.9438714419765777 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 70062 16898 LYHDIFSRL True PC9_epitope_Rep4 1162.61349337078 1162.6123899358602 72.983 2 0.15766071347231128 0.0008295110764126086 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 108269 6747 TEAQEVVEA True H1975_Epitope_Rep2 974.4556553166998 974.4551049679301 30.867 1 0.15765834689838917 0.0008295110764126086 0.9438714419765777 ['ENST00000468290.1_1_9:136198707-136199617:-|nuORF', 'ENSG00000148296|ENST00000372022|SURF6'] 88060 18309 QVVGGIYGV True PC9_epitope_Rep2 890.4861675993399 890.48561496793 75.753 1 0.15765577581809612 0.0008295110764126086 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 72301 5172 MSEEHTAVY True H1975_Epitope_Rep2 1065.44371073401 1065.4426099358602 24.97 2 0.15765575757779451 0.0008295110764126086 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 70620 12514 MADPNIRFL True H1975_Epitope_Rep3 1075.54845058607 1075.5473499358602 53.331 2 0.1576552210713437 0.0008295110764126086 0.9438714419765777 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 61231 18519 LLDPSVFHV True PC9_epitope_Rep6 1025.5545815123298 1025.5534899358602 83.875 2 0.15765192424186197 0.0008295110764126086 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 130282 12613 VTTDIQVKV True PC9_epitope_Rep1 1001.5757108797299 1001.5746099358599 53.384 2 0.15764917790362545 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 132211 9150 VYKGEEATF True PC9_epitope_Rep5 1042.4971262058598 1042.4960299358602 40.142 2 0.15764887361638807 0.0008295110764126086 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 43889 16676 ILDIPNQLY True H1975_Epitope_Rep2 1087.59136094387 1087.59026993586 69.38 2 0.15764863547113236 0.0008295110764126086 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF', 'ENST00000482545.5_1_1:113239451-113241292:+|nuORF', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 59799 6340 LHAQGDPAL True PC9_epitope_Rep2 920.4715801643599 920.47048993586 29.786 2 0.15764192359932166 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000257365|P49356-2|FNTB', 'ENSG00000257365|ENST00000246166|FNTB'] 49077 11184 KFSPNTSQF True PC9_epitope_Rep3 1054.5083595959002 1054.5072699358602 48.023 2 0.15763503100270518 0.0008295110764126086 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 3100 13723 AGAPAPLYL True H1975_Epitope_Rep2 871.4803539429099 871.47980496793 57.93 1 0.15762904530558378 0.0008295110764126086 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5'] 2119 5797 AELQSRLAA True H1975_Epitope_Rep2 957.5243440132099 957.52324993586 27.287 2 0.15761901849877977 0.0008295110764126086 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 75991 17143 NRIGSSLYAL True PC9_epitope_Rep5 1092.5927579262 1092.5916699358602 70.961 2 0.15761589898463682 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 104755 10925 STDLQDYTY True H1975_Epitope_Rep3 1104.46113461996 1104.4600299358601 47.109 2 0.15760306427892293 0.0008295110764126086 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 87907 10598 QVNDAFTHV True PC9_epitope_Rep2 1029.4879585044898 1029.48686993586 46.081 2 0.15760156879727344 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 46132 10437 ITALDEFATK True H1975_Epitope_Rep1 1107.58119018299 1107.58008993586 45.1 2 0.15759979629498924 0.0008295110764126086 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 43297 7755 IHDSQAPSL True PC9_epitope_Rep5 966.47705946762 966.47596993586 34.771 2 0.15759645297125724 0.0008295110764126086 0.9438714419765777 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF'] 9960 8036 AYRQGHFTY True PC9_epitope_Rep5 1141.53049202281 1141.52884490379 35.848 3 0.15759543008659516 0.0008295110764126086 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 117042 17213 TYQLGFHSI True PC9_epitope_Rep2 1064.52909504048 1064.5279899358602 71.467 2 0.1575939588417279 0.0008295110764126086 0.9438714419765777 ['ENSG00000142507|ENST00000270586|PSMB6'] 61164 11933 LLDISQKNLY True H1975_Epitope_Rep2 1205.66558851329 1205.66448993586 50.978 2 0.15759154580110646 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000171291|Q8NDP4|ZNF439', 'ENSG00000171291|ENST00000682736|ZNF439'] 22801 19505 EVDPSDWIGLY True H1975_Epitope_Rep3 1292.5924831426798 1292.5913899358602 81.74 2 0.15757927082891662 0.0008295110764126086 0.9438714419765777 ['ENSG00000138411|ENST00000644978|HECW2'] 4307 18732 AILELDEHL True PC9_epitope_Rep4 1051.55497543515 1051.5538699358601 80.134 2 0.15757583683915338 0.0008295110764126086 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 4110 8758 AHTAEVNCL True PC9_epitope_Rep1 956.43856578392 956.43746993586 38.526 2 0.15756394404544227 0.0008295110764126086 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 38428 8364 HGSLGFLPR True NCI_RA007_Epitope_Rep4 982.53484912726 982.53374993586 38.987 2 0.15756193984355596 0.0008295110764126086 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000484615.5_1_22:39713464-39715605:-|nuORF', 'ENST00000460589.5_1_22:39713464-39715412:-|nuORF', 'ENST00000465618.5_1_22:39712851-39715803:-|nuORF'] 19152 10723 ELISNSSDAL True H1975_Epitope_Rep1 1047.50841916555 1047.50732993586 46.207 2 0.15756167524197578 0.0008295110764126086 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P'] 11172 20013 DEHLQLISL True PC9_epitope_Rep4 1066.56587447202 1066.56476993586 85.114 2 0.1575613730703036 0.0008295110764126086 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 8325 4448 ATLNVSTTR True NCI_RA007_Epitope_Rep5 961.5192586327701 961.51816993586 23.753 2 0.15755816036346532 0.0008295110764126086 0.9438714419765777 ['ENST00000460846.1_1_13:111557570-111567134:-|nuORF', 'nc|ENSG00000088448|Q9NXR5-2|ANKRD10', 'ENSG00000088448|ENST00000267339|ANKRD10'] 2138 11239 AELWGEQAEA True H1975_Epitope_Rep1 1102.49310345458 1102.4925749679298 48.205 1 0.15755769368681935 0.0008295110764126086 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 88298 20412 QYILFPLRF True PC9_epitope_Rep6 1195.67536535135 1195.6742699358601 91.219 2 0.15754609308694262 0.0008295110764126086 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 88511 9531 RADDTFEAL True NCI_RA007_Epitope_Rep4 1036.48253877088 1036.4814499358602 43.512 2 0.1575441107644129 0.0008295110764126086 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 104868 15112 STEQIPILY True H1975_Epitope_Rep3 1062.5597264624198 1062.55917496793 63.526 1 0.15753713113171244 0.0008295110764126086 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 105716 12581 SVHKGFAFV True PC9_epitope_Rep3 990.5287011176598 990.52760993586 53.416 2 0.1575282485594047 0.0008295110764126086 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 75706 20444 NQVGIVLNV True PC9_epitope_Rep5 954.5498304850599 954.54872993586 83.675 2 0.15752388560862077 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'ENST00000467287.5_1_1:151401965-151414680:-|nuORF', 'nc|ENSG00000143442|Q7Z3K3-4|POGZ'] 82145 7630 PTDPKVVVY True H1975_Epitope_Rep3 1016.5542471591598 1016.55314993586 34.331 2 0.157523266742255 0.0008295110764126086 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 103700 9778 SRDTTMYAV True PC9_epitope_Rep3 1042.47534521546 1042.4742499358601 42.565 2 0.15751753504503485 0.0008295110764126086 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA'] 17814 14175 EHYYNAISV True PC9_epitope_Rep5 1094.50327421546 1094.5021699358601 59.534 2 0.15751656388620366 0.0008295110764126086 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 24503 22966 FAISILQQL True PC9_epitope_Rep3 1031.60153170475 1031.6004299358601 93.604 2 0.15751488165970928 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 98552 15786 SILSNIHEV True PC9_epitope_Rep2 1010.53965972418 1010.53856993586 65.985 2 0.15751219057996907 0.0008295110764126086 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1', 'ABCA1|p.Q1986E|1|0.35|ENSG00000165029|chr9:104788539-104788539|G/C|missense_variant'] 19240 8571 ELLDELSR True H1975_Epitope_Rep1 973.50802524273 973.50692993586 37.895 2 0.1575118169555513 0.0008295110764126086 0.9438714419765777 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2'] 72167 22740 MRLLSFVVL True PC9_epitope_Rep5 1076.64162269492 1076.64052993586 92.474 2 0.15751160187569266 0.0008295110764126086 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF', 'chr1:156020167-156020337|162|12.83|0.31|5.36|-|0|SSR2,None|1'] 60364 21693 LIIDEIHLL True PC9_epitope_Rep2 1077.64339651673 1077.6422899358602 88.92 2 0.1575075057148643 0.0008295110764126086 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3'] 45081 6708 IQRTPKIQVY True H1975_Epitope_Rep1 1244.7241064489199 1244.72245490379 30.848 3 0.15750722949640372 0.0008295110764126086 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 31699 14788 GEIIDIFKP True H1975_Epitope_Rep2 1030.5698972233 1030.5688099358601 62.041 2 0.15750353047622404 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000145730|P19021-6|PAM', 'nc|ENSG00000145730|P19021-2|PAM', 'ENSG00000145730|ENST00000438793|PAM', 'nc|ENSG00000145730|P19021-5|PAM', 'nc|ENSG00000145730|P19021-4|PAM', 'nc|ENSG00000145730|P19021-3|PAM', 'ENST00000504456.1_1_5:102343300-102364769:+|nuORF', 'ENST00000510006.5_1_5:102343180-102364608:+|nuORF'] 74724 23715 NLLDLLTEV True PC9_epitope_Rep4 1028.57537652656 1028.5748749679299 99.579 1 0.1575016506545095 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 18705 17848 ELDETKIIL True PC9_epitope_Rep4 1072.6015912743999 1072.6004899358602 76.689 2 0.1574899805299776 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6', 'ENST00000463014.1_1_7:44246980-44247830:+|nuORF'] 89851 14381 RFLNDPGHLLW True NCI_RA007_Epitope_Rep4 1366.7146043943799 1366.7135099358602 62.624 2 0.15748501445889268 0.0008295110764126086 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 87891 11626 QVLSEVSRV True PC9_epitope_Rep5 1015.56620882519 1015.56510993586 49.714 2 0.15747344884914763 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000284753|P0DPD7|EEF1AKMT4'] 89396 2735 REMPVKVEA True H1975_Epitope_Rep2 1057.5590152697698 1057.5579099358602 14.579 2 0.15747330623925565 0.0008295110764126086 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 115317 12317 TVDRVVLLY True H1975_Epitope_Rep2 1076.62299542532 1076.62188993586 52.461 2 0.15746204590582177 0.0008295110764126086 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF'] 2179 11729 AEMSTPLSV True H1975_Epitope_Rep2 933.44773348529 933.4471849679301 50.188 1 0.15746187235398176 0.0008295110764126086 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1'] 134352 12187 WSDIPTDQY True H1975_Epitope_Rep2 1123.4822044177101 1123.48110993586 51.959 2 0.15745718734792008 0.0008295110764126086 0.9438714419765777 ['ENSG00000117408|ENST00000372343|IPO13'] 22300 10636 ETEDVNLAY True H1975_Epitope_Rep3 1052.4662200004 1052.4651299358602 45.985 2 0.15744835808862828 0.0008295110764126086 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000153767|ENST00000283875|GTF2E1'] 114179 15985 TRTEQTFIL True PC9_epitope_Rep1 1107.59242357303 1107.5913299358601 66.295 2 0.15744374003105438 0.0008295110764126086 0.9438714419765777 ['RPS6KC1|p.K880Ffs*6|1|0.26|ENSG00000136643|chr1:213242113-213242120|CAAGGAAA/TTT|frameshift_variant', 'nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 82993 21955 PYFNAPVYL True PC9_epitope_Rep3 1082.5436824754597 1082.5425899358602 89.75 2 0.1574383099785176 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 132124 7418 VYISEHEHF True NCI_RA007_Epitope_Rep1 1159.5298233164701 1159.5281849037901 32.851 3 0.15743723087906442 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 33818 9782 GLTSVINQK True PC9_epitope_Rep3 958.5447451046199 958.54364993586 42.581 2 0.15742868280585934 0.0008295110764126086 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 27108 10444 FLQEKSPAV True PC9_epitope_Rep5 1017.5494961318899 1017.54838993586 45.16 2 0.1574273987717131 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 6896 14002 AQIKPFYTV True PC9_epitope_Rep6 1065.5858816406098 1065.58478993586 65.715 2 0.15742723695295702 0.0008295110764126086 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 89095 4991 REEYQPATP True H1975_Epitope_Rep3 1089.5090878718897 1089.50798993586 24.327 2 0.1574155466957419 0.0008295110764126086 0.9438714419765777 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000505521.1_1_5:177019550-177020791:+|nuORF', 'ENST00000507723.1_1_5:177019275-177020791:+|nuORF'] 52814 19648 KQVEEIFNL True PC9_epitope_Rep1 1118.5971746003 1118.5966749679299 80.4 1 0.15741516212207265 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 105801 16361 SVINEINKI True PC9_epitope_Rep1 1028.5866099165999 1028.58550993586 67.752 2 0.15740786980666072 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 97958 7891 SHQTGVVAL True PC9_epitope_Rep4 910.4872302284999 910.48612993586 37.782 2 0.15739911613466875 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 89191 12567 REIEELLAEA True NCI_RA007_Epitope_Rep5 1171.6084675599898 1171.60736993586 54.992 2 0.1573945420941635 0.0008295110764126086 0.9438714419765777 ['ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF', 'nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10'] 8733 10363 AVDPTSGQLY True H1975_Epitope_Rep2 1049.50293986229 1049.5023749679299 44.871 1 0.15739321633760464 0.0008295110764126086 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 75424 13467 NQFPGFKEV True PC9_epitope_Rep6 1064.52909504048 1064.5279899358602 63.495 2 0.15738628669882407 0.0008295110764126086 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 103514 7640 SRDASAVSL True PC9_epitope_Rep1 904.4614094034799 904.46030993586 34.21 2 0.15738512516850398 0.0008295110764126086 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 90826 4801 RKVEVDGSL True NCI_RA007_Epitope_Rep4 1001.5505587610498 1001.54946993586 24.903 2 0.15738178693284383 0.0008295110764126086 0.9438714419765777 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 120424 20470 VFTEVANLF True PC9_epitope_Rep6 1038.53859709502 1038.53750993586 91.455 2 0.1573787896355798 0.0008295110764126086 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 135690 12413 YEIDKTLGI True H1975_Epitope_Rep2 1050.55972646242 1050.5586299358602 52.832 2 0.1573770535381743 0.0008295110764126086 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 31232 12144 GDLPFVVPR True H1975_Epitope_Rep1 998.5549158654999 998.55380993586 51.728 2 0.1573770341165109 0.0008295110764126086 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 18060 18273 EIITIIHQV True PC9_epitope_Rep2 1064.6229954253201 1064.62188993586 75.608 2 0.15737072769774055 0.0008295110764126086 0.9438714419765777 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 70175 14897 LYLKALEGF True NCI_RA007_Epitope_Rep4 1052.5906326678798 1052.5895299358601 64.764 2 0.15736319721327832 0.0008658797794285193 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 76863 21023 NVIESFTEL True PC9_epitope_Rep4 1050.5233409537 1050.5222499358601 89.027 2 0.15736185469669833 0.0008658797794285193 0.9438714419765777 ['RAB40A|p.I163V|1|0.09|ENSG00000172476|chrX:103500270-103500270|T/C|missense_variant', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENSG00000197562|ENST00000248139|RAB40C'] 53076 10258 KSDLFFHDY True H1975_Epitope_Rep2 1170.53457434374 1170.5329349037902 44.463 3 0.1573589545961403 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1'] 93622 6865 RTDPVVADY True H1975_Epitope_Rep2 1034.50327421546 1034.5021699358601 31.325 2 0.1573536356345058 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 108487 4428 TEEYPNKPP True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 22.144 2 0.15735221955538478 0.0008658797794285193 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A'] 101707 5256 SPGLQKEAV True PC9_epitope_Rep2 927.5025459394699 927.50144993586 25.604 2 0.157350096553055 0.0008658797794285193 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 18363 20804 EIYKEFFEV True PC9_epitope_Rep3 1202.58594121026 1202.5848499358601 85.294 2 0.15734694198047175 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 47095 7111 IVVPKAAIVAR True NCI_RA007_Epitope_Rep3 1135.7441136175098 1135.74247490379 35.088 3 0.15734099121597486 0.0008658797794285193 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP', 'ENST00000488537.1_1_1:145440216-145440639:+|nuORF'] 24043 14560 EYQDLLNVK True PC9_epitope_Rep4 1120.5764391557198 1120.57534993586 63.92 2 0.15733791618417073 0.0008658797794285193 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 68740 16455 LVDLAPLGY True H1975_Epitope_Rep1 959.5327834385898 959.5322349679301 68.657 1 0.15733279790215857 0.0008658797794285193 0.9438714419765777 ['DTX2|p.H232Tfs*122|1|0.12|ENSG00000091073|chr7:76482925-76482926|-/C|frameshift_variant', 'nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 106662 22127 SYADQMFLL True PC9_epitope_Rep4 1086.50558271458 1086.5050749679299 93.327 1 0.15732689005123868 0.0008658797794285193 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 21294 15944 ERIQDYDVSL True PC9_epitope_Rep4 1236.5986311522797 1236.5975299358602 69.256 2 0.15732361916482185 0.0008658797794285193 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 94985 10074 RYQDIIHSI True NCI_RA007_Epitope_Rep1 1143.6036569630699 1143.60254993586 43.195 2 0.15732235945407036 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 88927 6276 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 29.084 2 0.1573173521262598 0.0008658797794285193 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 28029 16837 FRADDTFEAL True PC9_epitope_Rep6 1183.55095268387 1183.54984993586 77.278 2 0.15731053927359956 0.0008658797794285193 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 86563 10197 QRATIDPEL True PC9_epitope_Rep4 1041.5454733806098 1041.54436993586 46.899 2 0.15730717059623053 0.0008658797794285193 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1'] 87805 9257 QVIGVVLQK True NCI_RA007_Epitope_Rep2 982.6175161220598 982.61640993586 40.616 2 0.15730644453491358 0.0008658797794285193 0.9438714419765777 ['ENST00000297857.3_1_8:124268339-124279533:-|nuORF'] 118882 5532 VEEPENPAA True H1975_Epitope_Rep2 954.4294405688598 954.4288949679301 26.286 1 0.15730633367775668 0.0008658797794285193 0.9438714419765777 ['ENSG00000171316|ENST00000423902|CHD7'] 83295 9691 QAIDSIHQV True PC9_epitope_Rep5 1009.51925863277 1009.51816993586 42.244 2 0.15730029655437494 0.0008658797794285193 0.9438714419765777 ['ENSG00000066084|ENST00000301180|DIP2B', 'nc|ENSG00000151240|Q9Y2E4-2|DIP2C', 'ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A'] 100432 14252 SLPEELNRV True PC9_epitope_Rep1 1055.56112344475 1055.56002993586 59.645 2 0.15729768306656147 0.0008658797794285193 0.9438714419765777 ['ENSG00000137815|ENST00000389629|RTF1', 'NUSAP1-RTF1|1|fusion'] 113574 19493 TRADLIFTV True PC9_epitope_Rep2 1034.5760452328998 1034.57494993586 80.362 2 0.1572940997810417 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 128388 8572 VSDSGISTDY True H1975_Epitope_Rep3 1042.44548455582 1042.44497496793 37.963 1 0.15729006644231944 0.0008658797794285193 0.9438714419765777 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 124274 10310 VLDEADLSRY True H1975_Epitope_Rep1 1179.57716743171 1179.57606993586 44.603 2 0.15728020324283612 0.0008658797794285193 0.9438714419765777 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1'] 30537 19367 GAIPRLVQL True PC9_epitope_Rep1 965.6022004110898 965.60110993586 79.302 2 0.15727927897840277 0.0008658797794285193 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 9015 9371 AVIEAEHTL True PC9_epitope_Rep4 981.5131106231701 981.51200993586 43.654 2 0.15727893154085906 0.0008658797794285193 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'ENST00000436565.2_1_13:77561342-77561690:+|nuORF'] 2450 5636 AEQMASVQNA True H1975_Epitope_Rep2 1047.46550880775 1047.4644099358602 26.678 2 0.15727589047338783 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 116383 7210 TVYSGEEKL True PC9_epitope_Rep6 1024.5076908895599 1024.5065899358601 36.826 2 0.1572755810266522 0.0008658797794285193 0.9438714419765777 ['ENSG00000166224|ENST00000373202|SGPL1'] 8003 6700 ATDPTIHTV True PC9_epitope_Rep2 953.4818104948899 953.48070993586 31.178 2 0.15727276603863574 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 115142 6503 TVADKIHSV True PC9_epitope_Rep1 968.52909504048 968.52798993586 29.817 2 0.15726820433455005 0.0008658797794285193 0.9438714419765777 ['ENSG00000276023|ENST00000617516|DUSP14'] 98196 13917 SIDSLQLGY True H1975_Epitope_Rep3 994.49712620586 994.4965749679301 58.846 1 0.15726750024243388 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 70997 15196 MEQPLDLTHIV True H1975_Epitope_Rep2 1294.65912323386 1294.6580299358602 63.607 2 0.15726489154563617 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 123410 9247 VIDQQNGLY True H1975_Epitope_Rep1 1048.5189242795998 1048.5178299358602 40.48 2 0.15726317475462512 0.0008658797794285193 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 136582 20540 YHVDSLLQL True PC9_epitope_Rep3 1086.57095985246 1086.5698699358602 84.27 2 0.15726012108822304 0.0008658797794285193 0.9438714419765777 ['ENSG00000141002|ENST00000263346|TCF25'] 107056 19160 SYLPLAHMF True PC9_epitope_Rep6 1077.53173789277 1077.53064993586 86.349 2 0.1572592474386898 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 94680 11303 RYLEKPMEI True PC9_epitope_Rep2 1177.6165301458898 1177.61488490379 48.799 3 0.1572487815720065 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 67520 15435 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.57517496793 64.528 1 0.15724771720432484 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 43042 12643 IGGIGTVPVGR True PC9_epitope_Rep3 1024.6029286870798 1024.60182993586 53.653 2 0.15724382147823784 0.0008658797794285193 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 2255 6310 AEPAKIEAFR True NCI_RA007_Epitope_Rep1 1130.6084079903399 1130.6067749037902 28.57 3 0.15724062175451164 0.0008658797794285193 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 21407 21584 ERNDLIVFL True PC9_epitope_Rep5 1117.6131590176099 1117.61206993586 88.063 2 0.15723406420414784 0.0008658797794285193 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1'] 120314 16149 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 67.263 2 0.15723176988221324 0.0008658797794285193 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 29249 19969 FVDEYDPTI True PC9_epitope_Rep5 1097.49170647225 1097.49117496793 81.862 1 0.157225916201216 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 116269 10049 TVVERLVKV True PC9_epitope_Rep6 1041.65462990677 1041.6535299358602 49.234 2 0.15721915622069363 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000562408.1_1_16:28128533-28137161:-|nuORF'] 70352 22212 LYPSIIQEF True PC9_epitope_Rep2 1108.580461907 1108.57936993586 90.918 2 0.15721822798937352 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 91047 14830 RLLDEEISRV True PC9_epitope_Rep5 1228.67755017932 1228.67590490379 62.044 3 0.15721521528779925 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.K134Rfs*14|1|0.17|ENSG00000112531|chr6:163478888-163478888|A/-|frameshift_variant'] 39913 17713 HQLESILAM True PC9_epitope_Rep4 1040.5324661687598 1040.53136993586 76.158 2 0.15721350027647185 0.0008658797794285193 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 75687 16589 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53911496793 68.815 1 0.15720826456021647 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 132252 20209 VYKVPPFTF True PC9_epitope_Rep2 1096.59571804832 1096.5946299358602 83.151 2 0.1571964937703971 0.0008658797794285193 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-3|CAVIN1'] 26034 21251 FHDHALMIIF True PC9_epitope_Rep3 1242.6219498795 1242.6208499358602 87.035 2 0.15719456671598173 0.0008658797794285193 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 47501 18930 IYLDTHFRL True PC9_epitope_Rep2 1176.6291434349198 1176.6274949037902 78.179 3 0.1571884051307426 0.0008658797794285193 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 119531 9980 VEQWPYRAVA True H1975_Epitope_Rep1 1217.61930702721 1217.61820993586 43.323 2 0.1571806118018095 0.0008658797794285193 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 103678 13700 SRDPVQLNL True PC9_epitope_Rep4 1040.56145779792 1040.56036993586 60.585 2 0.1571779772202668 0.0008658797794285193 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 16262 7196 EEIDISKAA True H1975_Epitope_Rep2 974.49204082542 974.49094993586 32.613 2 0.15717187186581696 0.0008658797794285193 0.9438714419765777 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 105723 9127 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 45.211 2 0.15716794515480895 0.0008658797794285193 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 4322 17869 AILSQFEKV True PC9_epitope_Rep5 1033.5807962601698 1033.5796899358602 73.752 2 0.15716359343119465 0.0008658797794285193 0.9438714419765777 ['ENSG00000162441|ENST00000377223|LZIC', 'nc|ENSG00000162441|Q8WZA0-2|LZIC'] 14313 7340 DTDGKCLEY True H1975_Epitope_Rep2 1042.4277263166998 1042.42662993586 33.175 2 0.15716252455504176 0.0008658797794285193 0.9438714419765777 ['ENST00000498524.5_1_3:15727727-15838055:-|nuORF', 'nc|ENSG00000206560|O15084-2|ANKRD28', 'nc|ENSG00000206560|O15084|ANKRD28', 'ENSG00000206560|ENST00000683139|ANKRD28', 'nc|ENSG00000206560|O15084-1|ANKRD28'] 48811 4881 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 23.86 2 0.1571524647915518 0.0008658797794285193 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 77175 21846 NYGDYFNVF True PC9_epitope_Rep4 1137.47672511445 1137.47562993586 92.233 2 0.1571497626693203 0.0008658797794285193 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 3229 5249 AGFAGDDAPR True NCI_RA007_Epitope_Rep2 975.4410083120698 975.43990993586 25.038 2 0.1571480733266697 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 52298 11863 KPANLLISA True PC9_epitope_Rep2 925.55966689277 925.55856993586 50.957 2 0.15713629217720926 0.0008658797794285193 0.9438714419765777 ['ENST00000459720.5_1_9:90585689-90589466:-|nuORF', 'nc|ENSG00000156345|Q8IZL9-2|CDK20', 'nc|ENSG00000156345|Q8IZL9-3|CDK20', 'nc|ENSG00000156345|Q8IZL9-5|CDK20', 'nc|ENSG00000156345|Q8IZL9-4|CDK20', 'ENSG00000156345|ENST00000325303|CDK20'] 9166 15145 AVNPKFLAV True PC9_epitope_Rep2 957.5647522732099 957.56364993586 63.514 2 0.15713615587147478 0.0008658797794285193 0.9438714419765777 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 68065 7259 LTNQEPIA True H1975_Epitope_Rep3 884.4603467743199 884.45924993586 32.894 2 0.15713260349630132 0.0008658797794285193 0.9438714419765777 ['ENST00000370382.7_2_1:92546128-92605069:+|nuORF', 'nc|ENSG00000189195|Q5XKL5-4|BTBD8', 'nc|ENSG00000189195|Q5XKL5|BTBD8'] 5237 10405 ALQEMVHQV True PC9_epitope_Rep6 1053.52771514149 1053.52660993586 50.756 2 0.15713166826351482 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 84223 5577 QEVAQVASA True H1975_Epitope_Rep2 901.4505103666098 901.4499649679301 26.456 1 0.15712819010913748 0.0008658797794285193 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 104752 10965 STDLQDYTY True H1975_Epitope_Rep2 1104.46113461996 1104.46057496793 47.206 1 0.157127470448085 0.0008658797794285193 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 6687 15055 AQAPGVITGV True PC9_epitope_Rep5 911.5076313199099 911.50652993586 62.915 2 0.15712737792351522 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 131840 6486 VYASDRATF True NCI_RA007_Epitope_Rep3 1028.4927095317598 1028.4916099358602 32.544 2 0.15711743042756943 0.0008658797794285193 0.9438714419765777 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 109727 15004 THGIFTIST True PC9_epitope_Rep2 975.5025459394701 975.50144993586 62.968 2 0.15711329388529388 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 76501 8089 NTDHQTQLLY True H1975_Epitope_Rep3 1231.5833154413099 1231.5822099358602 36.089 2 0.15711196177212244 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 83649 8017 QEAEPPLTA True H1975_Epitope_Rep2 954.4658260775799 954.46472993586 35.785 2 0.15710995084979948 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 96259 8974 SEEPLLHVA True H1975_Epitope_Rep2 993.51311062317 993.51200993586 39.474 2 0.15710905939647374 0.0008658797794285193 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.N341Ifs*23|1|0.12|ENSG00000130589|chr20:63569211-63569214|TAGT/-|frameshift_variant', 'HELZ2|p.V187F|1|0.26|ENSG00000130589|chr20:63570515-63570515|C/A|missense_variant'] 139268 12814 YTDFPCQY True H1975_Epitope_Rep2 1035.40078329287 1035.40027496793 54.397 1 0.1570998458541692 0.0008658797794285193 0.9438714419765777 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 28909 12412 FTEEQAVLY True H1975_Epitope_Rep1 1098.5233409536997 1098.5222499358601 52.777 2 0.15709859426846626 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 42435 6475 IEQETPVSA True H1975_Epitope_Rep3 972.4763907612798 972.47528993586 29.875 2 0.1570937604793582 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2', 'ENST00000395449.7_1_11:47187835-47198404:-|nuORF'] 60044 14022 LHSDLEYTV True PC9_epitope_Rep1 1075.51858992643 1075.51748993586 58.775 2 0.15708772987759 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 23664 20725 EYGPVYSTW True PC9_epitope_Rep1 1100.48147614172 1100.48097496793 84.543 1 0.1570852457663196 0.0008658797794285193 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30'] 103604 16054 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.60010993586 66.565 2 0.15708113946789506 0.0008658797794285193 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 6944 15460 AQLQDFVRA True PC9_epitope_Rep1 1046.55089311422 1046.5497899358602 64.288 2 0.15707776961570127 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 103721 5107 SREESAGPAL True PC9_epitope_Rep4 1015.4934378077497 1015.49234993586 26.299 2 0.15706681188399593 0.0008658797794285193 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 22411 16194 ETEYSFLDY True H1975_Epitope_Rep3 1165.4815357113698 1165.48097496793 67.747 1 0.1570654655438856 0.0008658797794285193 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 97055 5954 SEYIHAQVA True NCI_RA007_Epitope_Rep3 1016.4927095317598 1016.49160993586 30.401 2 0.15706363411475033 0.0008658797794285193 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 107775 19385 TAM[Oxidation]DVVYAL True PC9_epitope_Rep2 997.4790339940099 997.47792993586 79.942 2 0.15706080557097352 0.0008658797794285193 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 103745 14052 SRFGKFVQL True PC9_epitope_Rep2 1080.60801406752 1080.6069099358601 59.33 2 0.15705457419419833 0.0008658797794285193 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant'] 114524 3962 TSGPTTPLK True NCI_RA007_Epitope_Rep5 900.4916469026 900.49054993586 21.592 2 0.15704340774345882 0.0008658797794285193 0.9438714419765777 ['ENSG00000188112|ENST00000341865|C6orf132'] 129436 12417 VTEKDLLLY True H1975_Epitope_Rep2 1092.60667665484 1092.60556993586 52.848 2 0.15704254290681668 0.0008658797794285193 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 35654 8885 GTMTGMLYK True NCI_RA007_Epitope_Rep1 1000.47217441132 1000.47106993586 38.561 2 0.15704011450490954 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 77536 21334 NYQVQFVTL True PC9_epitope_Rep2 1110.57095985246 1110.5698699358602 87.526 2 0.15703988687644113 0.0008658797794285193 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 96124 7199 SEDVAKIVA True H1975_Epitope_Rep3 930.5022115862998 930.50110993586 32.666 2 0.15702580464737126 0.0008658797794285193 0.9438714419765777 ['ENST00000598115.1_1_19:51906295-51906697:-|nuORF', 'ENST00000477693.1_1_2:122488402-122494426:-|nuORF', 'ENSG00000155438|ENST00000285814|NIFK'] 40379 18468 HRTEMDWVL True PC9_epitope_Rep1 1185.5600778989299 1185.5589899358602 75.829 2 0.15701513384561516 0.0008658797794285193 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 9982 13760 AYSRVQYQF True PC9_epitope_Rep3 1160.5614577979202 1160.56036993586 58.011 2 0.15700972766413335 0.0008658797794285193 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 30133 16564 FYQPKIQQF True PC9_epitope_Rep2 1197.61824439805 1197.6171499358602 68.95 2 0.15700907796586147 0.0008658797794285193 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 74163 6771 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59691490379 31.451 3 0.157008928859991 0.0008658797794285193 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 67395 9408 LTDYLKNTY True H1975_Epitope_Rep1 1129.56554011885 1129.56444993586 41.1 2 0.15700880264464845 0.0008658797794285193 0.9438714419765777 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000461836.5_1_2:162903409-162929972:-|nuORF'] 94478 20428 RYGNTPFLF True PC9_epitope_Rep5 1113.56072952193 1113.5596299358601 83.613 2 0.15700525960211661 0.0008658797794285193 0.9438714419765777 ['ENSG00000188419|ENST00000357749|CHM'] 103340 21376 SQVEEELFSV True PC9_epitope_Rep5 1165.55028397753 1165.54918993586 87.284 2 0.156995946428857 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 24460 18930 FAHVIFQNV True PC9_epitope_Rep3 1073.56581490237 1073.56470993586 78.037 2 0.15698820102282302 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000106052|Q86VP1-2|TAX1BP1', 'ENSG00000106052|ENST00000396319|TAX1BP1', 'ENST00000490455.1_1_7:27788143-27797760:+|nuORF'] 129393 7214 VTEGSFVYK True NCI_RA007_Epitope_Rep4 1028.5178616504397 1028.51676993586 34.382 2 0.15698103895346924 0.0008658797794285193 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 95967 9489 SEADIRGFVA True NCI_RA007_Epitope_Rep3 1063.52982331647 1063.5287299358602 44.424 2 0.15697707759359353 0.0008658797794285193 0.9438714419765777 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 98008 8918 SHSSFQASL True PC9_epitope_Rep2 962.44575933934 962.44466993586 39.661 2 0.15697494089119485 0.0008658797794285193 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 83076 21060 PYMDSPQSIGF True PC9_epitope_Rep1 1240.5434247752798 1240.5423299358602 85.838 2 0.1569658808595465 0.0008658797794285193 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 131886 15682 VYDTVFKHF True PC9_epitope_Rep5 1154.5760452328998 1154.5744049037899 65.332 3 0.15695593380847572 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 40607 11059 HTDVGLLEY True H1975_Epitope_Rep1 1045.50802524273 1045.5069299358602 47.499 2 0.15695157097517312 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF'] 27457 15069 FNPFVTSDR True PC9_epitope_Rep5 1081.51925863277 1081.5181699358602 62.969 2 0.15695136821833275 0.0008658797794285193 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 103529 17646 SRDDNMFQI True PC9_epitope_Rep1 1124.49205790876 1124.4909699358602 72.668 2 0.1569421683335473 0.0008658797794285193 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 57948 11834 LEQNIQLPAA True H1975_Epitope_Rep3 1095.59242357303 1095.59187496793 50.667 1 0.1569299269878545 0.0008658797794285193 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 54370 11300 KYQIINEEF True NCI_RA007_Epitope_Rep5 1182.5920892198599 1182.59098993586 50.111 2 0.15692641220117032 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 14641 9210 DVNAAIATIK True H1975_Epitope_Rep1 1014.57095985246 1014.56986993586 40.335 2 0.15692276839826258 0.0008658797794285193 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 41749 14854 IDPFSLDALSK True H1975_Epitope_Rep3 1204.6339540318397 1204.6328499358601 62.519 2 0.15691865047952247 0.0008658797794285193 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 11681 18987 DHDRFWVL True PC9_epitope_Rep4 1086.52467836638 1086.5235899358602 81.125 2 0.15691765570351518 0.0008658797794285193 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 97403 10557 SGFEGMFTK True NCI_RA007_Epitope_Rep3 1002.4480678384599 1002.44696993586 48.581 2 0.15691232283375664 0.0008658797794285193 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2'] 40102 6155 HRDGALTQL True PC9_epitope_Rep2 1009.53049202281 1009.52938993586 29.068 2 0.1569104169519765 0.0008658797794285193 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 88944 5906 REDFKTAVV True H1975_Epitope_Rep2 1063.56620882519 1063.5651099358602 27.704 2 0.15690531978539635 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-4|EFCAB11', 'ENST00000555070.1_1_14:89878823-90420935:-|nuORF'] 44076 22706 ILLPQFLGV True PC9_epitope_Rep4 998.6164534928998 998.61534993586 95.566 2 0.15690455679234896 0.0008658797794285193 0.9438714419765777 ['ENSG00000099282|ENST00000373290|TSPAN15'] 130432 17292 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 71.33 2 0.15690026251209324 0.0008658797794285193 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 53843 10677 KYGNLSNYL True NCI_RA007_Epitope_Rep3 1070.53965972418 1070.53856993586 49.044 2 0.15688410847346518 0.0008658797794285193 0.9438714419765777 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'FLT1|p.C1110Afs*4|1|0.45|ENSG00000102755|chr13:28317556-28317556|A/-|frameshift_variant', 'ENST00000451650.1_1_3:46184698-46185163:-|nuORF'] 95421 15430 SAKSWPIFL True H1975_Epitope_Rep2 1047.57531695691 1047.5742099358602 64.509 2 0.15688015985572115 0.0008658797794285193 0.9438714419765777 ['ENSG00000162928|ENST00000295030|PEX13'] 64478 13201 LQVEEVHQL True PC9_epitope_Rep5 1093.57677350889 1093.57566993586 55.785 2 0.15687067586044315 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000184047|Q9NR28-2|DIABLO', 'nc|ENSG00000184047|Q9NR28-3|DIABLO', 'ENSG00000184047|ENST00000464942|DIABLO'] 135566 6458 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52897496793 29.814 1 0.15686744834849306 0.0008658797794285193 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 25564 9175 FESIIKEAA True H1975_Epitope_Rep2 1006.5335117145798 1006.53240993586 40.244 2 0.15686387947740085 0.0008658797794285193 0.9438714419765777 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5', 'chrX:135885350-135888848|170|110.96|0.05|11.14|-|ENST00000611668|CT45A10,CT45A10', 'chrX:135881315-135882536|241|118.07|1.0|6.88|-|ENST00000617981|CT45A10,CT45A10', 'chrX:135781735-135785220|228|373.1|0.31|10.21|-|ENST00000487941|CT45A5,CT45A5', 'chrX:135779641-135781561|228|103.74|0.53|7.61|-|ENST00000617203|CT45A5,CT45A5'] 8875 11485 AVFPSIVGRPR True PC9_epitope_Rep6 1197.69822605425 1197.6965849037902 55.25 3 0.15686129390973447 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 76577 6649 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.46030993586 30.53 2 0.1568606770356381 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 138984 12466 YSEYLYQEQY True H1975_Epitope_Rep2 1384.5823123818 1384.5812099358602 53.039 2 0.1568596208818159 0.0008658797794285193 0.9438714419765777 ['ENST00000557184.1_1_14:54976944-54997777:+|nuORF', 'ENSG00000100532|ENST00000216420|CGRRF1'] 76929 10038 NVNEFPVLK True H1975_Epitope_Rep3 1058.5760452328998 1058.57494993586 43.646 2 0.15685905415520562 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 72382 9721 MTEEEQIAY True H1975_Epitope_Rep3 1112.4695911286797 1112.4684899358601 42.412 2 0.15684638582066904 0.0008658797794285193 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 82362 6501 PTTLTDEEINR True H1975_Epitope_Rep1 1287.6306595565497 1287.6295699358602 30.067 2 0.1568414258361926 0.0008658797794285193 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 89146 13490 REGDLLFTVA True NCI_RA007_Epitope_Rep4 1119.5924235730301 1119.5913299358601 59.099 2 0.15683739609104239 0.0008658797794285193 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 104915 3942 STFRESFKK True NCI_RA007_Epitope_Rep2 1128.5927579262 1128.59110490379 19.969 3 0.15683382298845258 0.0008658797794285193 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 11678 20276 DHDRFWVL True PC9_epitope_Rep1 1086.52467836638 1086.5235899358602 82.819 2 0.156833272128579 0.0008658797794285193 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 76891 6279 NVKVDPEIQ True H1975_Epitope_Rep2 1040.5502244078798 1040.54912993586 29.095 2 0.15683266822934688 0.0008658797794285193 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.L163P|1|0.23|ENSG00000172867|chr12:52651655-52651655|A/G|missense_variant'] 123647 15537 VILPTVHEV True PC9_epitope_Rep2 1005.5858816406101 1005.58478993586 65.035 2 0.15683157827960903 0.0008658797794285193 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 33377 10004 GLESDVAELR True H1975_Epitope_Rep3 1087.5509526838698 1087.54984993586 43.516 2 0.15683041448275276 0.0008658797794285193 0.9438714419765777 ['ENSG00000176619|ENST00000325327|LMNB2'] 76301 11216 NSDVVEQIY True H1975_Epitope_Rep1 1065.49785448185 1065.49727496793 48.113 1 0.15682566996281244 0.0008658797794285193 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 100869 12420 SLSGELREV True PC9_epitope_Rep2 988.5189242795999 988.51782993586 53.081 2 0.1568238298832719 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 139948 19250 YVIEDDVNM True PC9_epitope_Rep1 1096.47467650912 1096.47356993586 78.845 2 0.1568214522617418 0.0008658797794285193 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 140724 9960 YYQHIVTTL True NCI_RA007_Epitope_Rep5 1136.5866099166 1136.58550993586 44.953 2 0.15682105361891646 0.0008658797794285193 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 40265 8777 HRNDELTSL True PC9_epitope_Rep5 1083.53088594563 1083.5297899358602 38.703 2 0.15681952164706148 0.0008658797794285193 0.9438714419765777 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 102686 4078 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 21.967 2 0.15681947834088744 0.0008658797794285193 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 129257 10232 VTDPSTLEQY True H1975_Epitope_Rep2 1151.53463391339 1151.5340749679299 44.362 1 0.15681910634053725 0.0008658797794285193 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 114435 7899 TSDYVSQSY True H1975_Epitope_Rep2 1048.43491987212 1048.43382993586 35.33 2 0.15680849968027913 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 138463 14379 YRFNGQYSSL True PC9_epitope_Rep2 1233.5778361380499 1233.5767299358602 60.569 2 0.15680203007218219 0.0008658797794285193 0.9438714419765777 ['ENSG00000182087|ENST00000356663|TMEM259'] 17431 13855 EHFPQAYSV True PC9_epitope_Rep3 1076.49270953176 1076.4916099358602 58.373 2 0.1567958569142956 0.0008658797794285193 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 40600 6232 HTDPDYSAAY True H1975_Epitope_Rep2 1138.45671794586 1138.45562993586 28.93 2 0.1567950009990588 0.0008658797794285193 0.9438714419765777 ['ENST00000579053.5_1_18:691132-706776:-|nuORF', 'ENST00000580605.5_1_18:693172-712587:-|nuORF', 'ENST00000578651.5_1_18:683014-712587:-|nuORF', 'ENSG00000132199|ENST00000647584|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-4|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-5|ENOSF1', 'nc|ENSG00000132199|Q7L5Y1-3|ENOSF1'] 109601 10615 THDEAVQVL True PC9_epitope_Rep1 1010.5032742154598 1010.50216993586 45.723 2 0.1567923476663019 0.0008658797794285193 0.9438714419765777 ['ENSG00000101400|ENST00000217381|SNTA1', 'SNTA1|p.G203Afs*15|1|0.32|ENSG00000101400|chr20:33417812-33417812|C/-|frameshift_variant', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 86321 21241 QQHSILLLL True PC9_epitope_Rep3 1063.6389798426299 1063.6378899358601 86.996 2 0.1567916169645809 0.0008658797794285193 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 2163 6051 AEMGTHTVSV True H1975_Epitope_Rep3 1030.4753452154598 1030.4742499358601 28.288 2 0.15679037089011294 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF'] 76302 11260 NSDVVEQIY True H1975_Epitope_Rep1 1065.49785448185 1065.4967499358602 48.288 2 0.15678477466534527 0.0008658797794285193 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 78179 6129 PAPPPPPPP True NCI_RA007_Epitope_Rep5 865.46978925921 865.46868993586 30.255 2 0.15678318271041142 0.0008658797794285193 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 139403 8819 YTEEDAVSY True H1975_Epitope_Rep2 1075.43458551895 1075.43348993586 38.889 2 0.1567786378994029 0.0008658797794285193 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 139957 19380 YVIELQHVV True PC9_epitope_Rep1 1098.60734536118 1098.6062499358602 79.354 2 0.15677428450067046 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000470113.2_1_3:49135784-49136686:-|nuORF', 'ENST00000494984.5_1_3:49135981-49136101:-|nuORF'] 69690 15488 LVYEGQLSQA True PC9_epitope_Rep1 1106.56078909158 1106.5596899358602 64.397 2 0.15677276573458168 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 139977 22014 YVITDLTQL True PC9_epitope_Rep5 1064.57537652656 1064.57426993586 89.703 2 0.15677216682801898 0.0008658797794285193 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 39702 9833 HPTWALKEA True PC9_epitope_Rep5 1051.5450794577898 1051.54398993586 42.792 2 0.15677186121375467 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 29229 15517 FVDEHTINI True PC9_epitope_Rep2 1086.53457434374 1086.53346993586 64.961 2 0.1567716457103566 0.0008658797794285193 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant', 'nc|ENSG00000123384|Q07954-2|LRP1'] 28056 20792 FRDFIPVVL True PC9_epitope_Rep4 1104.6331661861998 1104.63206993586 88.125 2 0.1567714279639647 0.0008658797794285193 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 136079 6513 YGAATFTRTG True NCI_RA007_Epitope_Rep5 1043.50360856863 1043.5025099358602 31.718 2 0.15677045371761342 0.0008658797794285193 0.9438714419765777 ['ENSG00000175899|ENST00000318602|A2M'] 86836 14726 QRQDIAFAY True PC9_epitope_Rep1 1110.5458077337798 1110.54470993586 61.465 2 0.15676840222299615 0.0008658797794285193 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 47976 10160 KAFQQEISL True NCI_RA007_Epitope_Rep4 1062.57095985246 1062.5698699358602 45.938 2 0.1567683873502112 0.0008658797794285193 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF'] 137216 6719 YLENPEIK True H1975_Epitope_Rep3 1004.5178616504398 1004.51676993586 30.801 2 0.1567632398264239 0.0008658797794285193 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 9305 10496 AVSDGVIKV True PC9_epitope_Rep4 886.5123823471799 886.51128993586 48.093 2 0.15676198098685598 0.0008658797794285193 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 117195 11419 TYTDVTPRQF True PC9_epitope_Rep6 1226.59315184902 1226.5920499358601 54.983 2 0.15676033324779162 0.0008658797794285193 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 73980 19095 NHQDVAGVFAL True PC9_epitope_Rep2 1169.58292151849 1169.58182993586 78.818 2 0.15675903333718963 0.0008658797794285193 0.9438714419765777 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 108417 4719 TEEEFSKTP True H1975_Epitope_Rep2 1066.4818700645399 1066.48076993586 23.244 2 0.15675230848513466 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 115121 19090 TTYEGIFKTL True PC9_epitope_Rep4 1171.6124903112698 1171.6113899358602 81.521 2 0.1567488784231178 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 17886 4737 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 23.312 3 0.15674158957479634 0.0008658797794285193 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 26262 12158 FIASKGVKLV True PC9_epitope_Rep5 1060.66446631448 1060.6633699358601 51.755 2 0.15674008629345376 0.0008658797794285193 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 106495 19809 SVVKVLTEL True PC9_epitope_Rep3 986.6011973515799 986.60010993586 81.429 2 0.1567381724970349 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 104747 10796 STDLQDYTY True H1975_Epitope_Rep1 1104.46113461996 1104.46057496793 46.49 1 0.1567360036148388 0.0008658797794285193 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 35050 19856 GRDLTDYLM True PC9_epitope_Rep1 1082.50664534374 1082.50554993586 81.192 2 0.15673077031534832 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 102996 18256 SQISDTSVVL True PC9_epitope_Rep5 1047.5448046742702 1047.54370993586 75.236 2 0.1567188397895884 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 54263 11209 KYPLLISRI True NCI_RA007_Epitope_Rep4 1101.69101541549 1101.6899099358602 50.005 2 0.15671765228869983 0.0008658797794285193 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ARHGEF2|p.P672Qfs*7|2|0.14|ENSG00000116584|chr1:155952207-155952207|C/-|frameshift_variant', 'ENST00000474428.6_1_1:155922555-155932010:-|nuORF', 'ENST00000608543.1_1_1:155931890-155932010:-|nuORF'] 127217 9943 VQIEEVRQV True PC9_epitope_Rep4 1098.6033226098998 1098.6022299358601 45.901 2 0.15671650175667853 0.0008658797794285193 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 45052 19822 IQPDNIVYV True PC9_epitope_Rep2 1059.56006081559 1059.5589699358602 81.635 2 0.15671398253819396 0.0008658797794285193 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 34902 7312 GQVTEAVKV True PC9_epitope_Rep2 929.5181960036099 929.51708993586 33.51 2 0.1567122676450475 0.0008658797794285193 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 72402 14540 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54126993586 61.085 2 0.1567098623009175 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 45154 19394 IRDLNIVVV True PC9_epitope_Rep3 1039.6389798426299 1039.6378899358601 79.822 2 0.15670714634056632 0.0008658797794285193 0.9438714419765777 ['ATL2|p.K282Nfs*32|1|0.35|ENSG00000119787|chr2:38310406-38310406|C/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'ENST00000474535.2_1_2:38545640-38570535:-|nuORF'] 83213 12431 QAADLAYQL True NCI_RA007_Epitope_Rep5 991.4974605590301 991.49636993586 54.473 2 0.15670670144306148 0.0008658797794285193 0.9438714419765777 ['ENSG00000147113|ENST00000398000|DIPK2B', 'DIPK2B|p.D262Y|1|0.55|ENSG00000147113|chrX:45154087-45154087|C/A|missense_variant'] 76294 13607 NSDVSLLNY True H1975_Epitope_Rep2 1023.48728979815 1023.48677496793 57.478 1 0.15670583706178268 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 20438 5658 EPQYPVRSA True PC9_epitope_Rep4 1045.5192586327698 1045.5181699358602 28.565 2 0.15670400068857884 0.0008658797794285193 0.9438714419765777 ['ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 99603 13198 SLFNTGFLK True NCI_RA007_Epitope_Rep3 1025.5545815123298 1025.5534899358602 59.185 2 0.15669639662217336 0.0008658797794285193 0.9438714419765777 ['ENSG00000121486|ENST00000367506|TRMT1L'] 7845 7562 ATAIGMPVEK True NCI_RA007_Epitope_Rep2 1015.5372171960299 1015.5361099358599 34.039 2 0.156696160076376 0.0008658797794285193 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 60199 18297 LIALLEVLSQK True NCI_RA007_Epitope_Rep2 1225.76457427857 1225.76346993586 75.928 2 0.1566956774579998 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 9400 5298 AVVGVVAGGGR True NCI_RA007_Epitope_Rep5 940.5454138109598 940.54430993586 27.072 2 0.15668410430468926 0.0008658797794285193 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8'] 90456 15513 RISLPLPNF True NCI_RA007_Epitope_Rep4 1055.61276509479 1055.6116699358602 67.377 2 0.1566826841373495 0.0008658797794285193 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 8741 9997 AVDSLVPIGR True H1975_Epitope_Rep1 1025.58694426977 1025.58584993586 43.389 2 0.15667849495056776 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF'] 113046 9950 TPVEVPVGGFK True H1975_Epitope_Rep3 1128.6179100448796 1128.6168099358601 43.306 2 0.1566760146745241 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 83045 21772 PYLDSFYEY True PC9_epitope_Rep3 1195.5073565363898 1195.50624993586 89.043 2 0.15667395311067212 0.0008658797794285193 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 108301 5318 TEDDPQEVSA True H1975_Epitope_Rep2 1089.44621283181 1089.44510993586 25.507 2 0.15667134893327533 0.0008658797794285193 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 47840 13028 IYSTKLYRF True PC9_epitope_Rep2 1189.6495445263297 1189.64788490379 55.393 3 0.15667018146801856 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENSG00000148925|ENST00000278174|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 129261 10297 VTDPSTLEQY True H1975_Epitope_Rep3 1151.53463391339 1151.53352993586 44.661 2 0.156663127521425 0.0008658797794285193 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 9980 12668 AYSRVQYQF True PC9_epitope_Rep2 1160.5614577979202 1160.56036993586 54.033 2 0.15666045305551843 0.0008658797794285193 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 32726 10744 GHVAPSVSL True PC9_epitope_Rep1 865.4657665079301 865.46466993586 46.213 2 0.15665623204869522 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 46231 9004 ITDSAGHILY True H1975_Epitope_Rep1 1088.55022440788 1088.54912993586 39.538 2 0.1566490309491618 0.0008658797794285193 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 23403 16997 EVVERLLSV True PC9_epitope_Rep6 1042.60225998074 1042.60116993586 77.929 2 0.15664645121941773 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 103796 14133 SRGDFVVEY True PC9_epitope_Rep2 1070.50327421546 1070.5021699358601 59.634 2 0.15664528222956217 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 105169 5330 STMSTNGIPR True NCI_RA007_Epitope_Rep3 1062.51279335334 1062.5116899358602 27.974 2 0.1566426003020644 0.0008658797794285193 0.9438714419765777 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 75759 16704 NRALPLEL True PC9_epitope_Rep2 924.53926580136 924.53816993586 69.5 2 0.15663953086022822 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'PRR14L|p.P1996Qfs*42|1|0.37|ENSG00000183530|chr22:31703563-31703563|G/-|frameshift_variant', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 106540 12176 SVVTGGVQSV True PC9_epitope_Rep1 931.49746055903 931.49636993586 51.693 2 0.1566366241764861 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 29246 20036 FVDEYDPTI True PC9_epitope_Rep1 1097.49170647225 1097.49117496793 81.896 1 0.15663252882632123 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 53309 17580 KTMEDTLMTV True PC9_epitope_Rep5 1167.55154693083 1167.5504499358601 72.63 2 0.15662546629735288 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 4715 17053 ALDSTNVEL True PC9_epitope_Rep3 960.47639076128 960.47528993586 70.747 2 0.15662114481540582 0.0008658797794285193 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 116381 7691 TVYSGEEKL True PC9_epitope_Rep4 1024.5076908895599 1024.5065899358601 36.966 2 0.15662022879579504 0.0008658797794285193 0.9438714419765777 ['ENSG00000166224|ENST00000373202|SGPL1'] 139533 8127 YTLDVTTGQR True NCI_RA007_Epitope_Rep2 1152.57750178488 1152.57640993586 36.246 2 0.15661641306765148 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'ENST00000434910.1_1_20:6194638-6195010:+|nuORF', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR', 'HNRNPR-E2F2|2|fusion', 'HNRNPR-E2F2|1|fusion'] 741 10108 AAVPRAAFL True H1975_Epitope_Rep3 914.5337864980999 914.53268993586 43.921 2 0.15661613030055818 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 137106 10411 YLDDPDLKY True H1975_Epitope_Rep3 1140.5339056374 1140.5333749679298 45.105 1 0.1566157896282123 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 65098 13235 LSDMPLKSFY True H1975_Epitope_Rep2 1199.58964669171 1199.58854993586 56.038 2 0.15661457869037246 0.0008658797794285193 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 47350 9078 IYHNPTANSF True PC9_epitope_Rep4 1162.54072235334 1162.5396299358601 42.501 2 0.15661177319104275 0.0008658797794285193 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 127245 21626 VQIPFFAKL True PC9_epitope_Rep5 1061.62735252977 1061.6262499358602 88.226 2 0.15660635645723678 0.0008658797794285193 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD'] 7515 9061 ASEPSAQLSY True H1975_Epitope_Rep2 1051.4822044177101 1051.48110993586 39.806 2 0.15660503691535071 0.0008658797794285193 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF'] 74817 16484 NLPDEIYHV True PC9_epitope_Rep4 1098.5345743437401 1098.53346993586 71.376 2 0.15660359693650625 0.0008658797794285193 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 92139 9098 RQAPIPAEL True NCI_RA007_Epitope_Rep2 993.5607295219298 993.55962993586 39.993 2 0.1566011971342284 0.0008658797794285193 0.9438714419765777 ['ENSG00000169583|ENST00000494426|CLIC3'] 31578 9924 GEFSITYKP True NCI_RA007_Epitope_Rep3 1040.5178616504397 1040.51676993586 46.119 2 0.15659701735905643 0.0008658797794285193 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 116715 19821 TYKNFFYLI True PC9_epitope_Rep6 1207.62774645259 1207.62664993586 88.9 2 0.156588536120308 0.0008658797794285193 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 116990 16023 TYPYLQHEI True PC9_epitope_Rep3 1162.5658744720201 1162.56476993586 66.782 2 0.15658697766170573 0.0008658797794285193 0.9438714419765777 ['PMEPA1|p.S209Qfs*3|1|0.15|ENSG00000124225|chr20:57652292-57652293|-/G|frameshift_variant', 'nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 90159 18936 RHDDYLVML True PC9_epitope_Rep5 1160.5648289262 1160.56318490379 77.86 3 0.15658481402299598 0.0008658797794285193 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 24072 15544 EYQKVWNLF True NCI_RA007_Epitope_Rep5 1225.6131590176099 1225.61206993586 66.49 2 0.15658443655900137 0.0008658797794285193 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 52145 19001 KLVGEFLEV True PC9_epitope_Rep4 1032.5855472874398 1032.5844499358602 81.178 2 0.15657865731060472 0.0008658797794285193 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 113481 9457 TQSEKQFVV True PC9_epitope_Rep3 1064.55022440788 1064.54912993586 41.32 2 0.15656931762576579 0.0008658797794285193 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 132605 20782 VYPQYVIEY True PC9_epitope_Rep1 1172.57537652656 1172.57426993586 84.767 2 0.15656794342029984 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 89258 8787 RELDPSLVSA True H1975_Epitope_Rep2 1085.57168812845 1085.5705899358602 38.763 2 0.15655895457232358 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 96044 5200 SEAPGQRALP True H1975_Epitope_Rep3 1024.5301576696397 1024.5290699358602 25.092 2 0.15655564209327213 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 38884 18530 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 76.299 2 0.15655330786875424 0.0008658797794285193 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 11718 17856 DHFRLGSVL True PC9_epitope_Rep1 1042.55597849466 1042.55488993586 73.477 2 0.15655204404940898 0.0008658797794285193 0.9438714419765777 ['ENSG00000158435|ENST00000289382|CNOT11'] 4047 20308 AHMDIFQNL True PC9_epitope_Rep5 1087.5120650773501 1087.5109699358602 83.159 2 0.15655061358626784 0.0008658797794285193 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1'] 21291 17312 ERIQDYDVSL True PC9_epitope_Rep1 1236.5986311522797 1236.5975299358602 71.407 2 0.15654885876766278 0.0008658797794285193 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 134910 7345 YADPVNAHY True H1975_Epitope_Rep2 1048.46140940348 1048.46030993586 33.193 2 0.1565485800163723 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 67233 12023 LTDLVDDNY True H1975_Epitope_Rep2 1066.48187006454 1066.48127496793 51.327 1 0.1565472817805196 0.0008658797794285193 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 127150 14187 VQDRFEVNV True PC9_epitope_Rep5 1104.55637241748 1104.55526993586 59.578 2 0.15654508439946094 0.0008658797794285193 0.9438714419765777 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14519750-14520297:-|nuORF'] 25480 5362 FENVGSPKP True H1975_Epitope_Rep3 973.4868958753299 973.48578993586 25.69 2 0.15654410044983227 0.0008658797794285193 0.9438714419765777 ['ENSG00000165895|ENST00000298815|ARHGAP42'] 24496 17025 FAIPLIERL True H1975_Epitope_Rep2 1070.64881625034 1070.6477099358601 70.742 2 0.15654073923149808 0.0008658797794285193 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 47784 9910 IYQRDPLKL True PC9_epitope_Rep6 1144.6604435631998 1144.65880490379 48.628 3 0.15653519980586159 0.0008658797794285193 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 71302 20609 MHDFNLISI True PC9_epitope_Rep2 1088.53246616876 1088.53136993586 84.706 2 0.15653365479122947 0.0008658797794285193 0.9438714419765777 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 113931 13662 TRISNDLEL True PC9_epitope_Rep2 1059.5560380643099 1059.5549499358601 57.842 2 0.15653289524002367 0.0008658797794285193 0.9438714419765777 ['ENSG00000007047|ENST00000262891|MARK4'] 17721 17599 EHSLVIDTL True PC9_epitope_Rep5 1025.53932537101 1025.5387749679298 72.703 1 0.15653050342372302 0.0008658797794285193 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 3964 18230 AHEGSIFAL True PC9_epitope_Rep5 943.4763311916299 943.4752299358599 75.133 2 0.15651764343208516 0.0008658797794285193 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 86598 13715 QRDFNSELL True PC9_epitope_Rep4 1120.5512870370399 1120.55018993586 60.643 2 0.15651111599671738 0.0008658797794285193 0.9438714419765777 ['ENSG00000042429|ENST00000251871|MED17'] 120017 21183 VFDPKVFTF True PC9_epitope_Rep3 1098.57498260374 1098.57388993586 86.768 2 0.156500574447419 0.0008658797794285193 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 123288 15174 VHSEQVFAL True PC9_epitope_Rep2 1028.5290950404797 1028.5279899358602 63.623 2 0.15649819365062875 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 1614 6208 AEFTVETR True H1975_Epitope_Rep3 951.4661604307499 951.46506993586 28.892 2 0.1564965465328634 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 17596 14902 EHLQVITTL True PC9_epitope_Rep6 1052.5866099166 1052.58550993586 69.312 2 0.1564920806569834 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 24116 7097 EYSKQMQRF True PC9_epitope_Rep1 1215.57064258263 1215.56899490379 32.108 3 0.156490704186882 0.0008658797794285193 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 101876 9322 SPLFSQHTA True PC9_epitope_Rep3 986.48214484806 986.48104993586 40.798 2 0.15648779025260995 0.0008658797794285193 0.9438714419765777 ['ENSG00000167721|ENST00000301364|TSR1'] 86635 8727 QRELGGTAL True PC9_epitope_Rep1 943.5086939490698 943.50758993586 38.405 2 0.15648516454534975 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000198026|Q9H4Z2-2|ZNF335', 'ENSG00000198026|ENST00000322927|ZNF335'] 73502 8002 NFEDVAFDEKK True H1975_Epitope_Rep1 1340.6248459001197 1340.62321490379 35.723 3 0.15648190916025226 0.0008658797794285193 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 135889 5959 YESLTDPSK True NCI_RA007_Epitope_Rep1 1038.48695544498 1038.4858499358602 27.226 2 0.15647172558460448 0.0008658797794285193 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000507090.2_1_4:13338255-13338456:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 75922 8104 NRDVPNETL True PC9_epitope_Rep3 1056.51998690876 1056.5188899358602 36.149 2 0.15646250576384274 0.0008658797794285193 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 1941 11962 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47456993586 51.016 2 0.1564579499175394 0.0008658797794285193 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 125341 14181 VLSIGDGIAR True PC9_epitope_Rep3 999.5712942056299 999.57018993586 59.633 2 0.1564460442515904 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF', 'ENST00000590448.5_1_18:43669752-43675082:-|nuORF'] 94703 9129 RYLEQLHQL True NCI_RA007_Epitope_Rep2 1198.64585612822 1198.64422490379 40.115 3 0.15644588871267573 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 85436 15749 QLEWDDSTLSY True H1975_Epitope_Rep2 1355.58812603823 1355.58702993586 65.751 2 0.15644559272056474 0.0008658797794285193 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 108306 5425 TEDDPQEVSA True H1975_Epitope_Rep3 1089.44621283181 1089.44567496793 25.926 1 0.1564455457300849 0.0008658797794285193 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 7996 6688 ATDPNILGR True NCI_RA007_Epitope_Rep5 955.50869394907 955.50758993586 32.395 2 0.15644283537663814 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 23637 13254 EYGFQNALIVR True NCI_RA007_Epitope_Rep1 1308.68263555976 1308.68152993586 55.555 2 0.15643553708967292 0.0008658797794285193 0.9438714419765777 ['CON__P02769'] 49476 11604 KIYEGQVEV True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 49.514 2 0.15643416823065587 0.0008658797794285193 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 54218 16738 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 71.145 2 0.15643360496797795 0.0008658797794285193 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 138140 20571 YQLEIPENFTT True PC9_epitope_Rep4 1353.6452469915296 1353.64414993586 87.278 2 0.15643246935331934 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 38035 4458 HEISEGNVATA True H1975_Epitope_Rep3 1126.52546621202 1126.52436993586 22.267 2 0.1564319689471277 0.0008658797794285193 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1'] 104725 12025 STDHIPILY True H1975_Epitope_Rep3 1057.54441075145 1057.5433099358602 51.415 2 0.15642985786763378 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 86783 17280 QRMTTQLLL True PC9_epitope_Rep5 1102.6168644990598 1102.61576993586 71.475 2 0.15641824456561612 0.0008658797794285193 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 133520 16584 WHHTFYNEL True PC9_epitope_Rep1 1245.55670677065 1245.5550749037902 68.615 3 0.15641557295416258 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 139327 5001 YTDSEPRATY True H1975_Epitope_Rep2 1201.52513185885 1201.5240299358602 24.322 2 0.1564140397533453 0.0008658797794285193 0.9438714419765777 ['ENSG00000158480|ENST00000289431|SPATA2'] 49421 16107 KILQELPSV True PC9_epitope_Rep4 1025.6120963884498 1025.61098993586 69.893 2 0.15639675650624504 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 53913 6538 KYIHSANVL True NCI_RA007_Epitope_Rep2 1043.57637958607 1043.5752899358602 30.042 2 0.15638015357310986 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3', 'ENSG00000069956|ENST00000261845|MAPK6', 'ENSG00000141639|ENST00000400384|MAPK4'] 40015 18954 HQTIVVQLL True PC9_epitope_Rep2 1049.62332977849 1049.62222993586 78.271 2 0.1563761669295544 0.0008658797794285193 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 83874 12812 QEIATVVVP True H1975_Epitope_Rep2 954.5385970950199 954.53750993586 54.389 2 0.15636944865129992 0.0008658797794285193 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 124806 19181 VLLGKVYVV True PC9_epitope_Rep3 988.63210355704 988.63100993586 78.998 2 0.15636452569454118 0.0008658797794285193 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24|p.G413S|1|0.3|ENSG00000114796|chr3:183671046-183671046|G/A|missense_variant'] 35174 15215 GSDEPAFMYY True H1975_Epitope_Rep2 1178.45902644498 1178.45847496793 63.681 1 0.15636430004141558 0.0008658797794285193 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 73572 19256 NFTNVAATF True PC9_epitope_Rep4 983.4712458111899 983.47014993586 82.172 2 0.15636197215003478 0.0008658797794285193 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 133507 21104 WHDSDWIL True PC9_epitope_Rep1 1070.48214484806 1070.48104993586 86.004 2 0.1563565659898862 0.0008658797794285193 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50'] 54071 21807 KYLVIGDLLF True PC9_epitope_Rep4 1179.69034670915 1179.68924993586 92.077 2 0.15634812088102598 0.0008658797794285193 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 29672 20620 FVNDIFERI True PC9_epitope_Rep2 1151.59750895347 1151.59640993586 84.748 2 0.15634682437581526 0.0008658797794285193 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 21101 8753 ERDPQSPEF True PC9_epitope_Rep3 1103.4883524273098 1103.48724993586 38.621 2 0.15634333189102423 0.0008658797794285193 0.9438714419765777 ['ENSG00000170903|ENST00000301919|MSANTD4'] 38181 11380 HESAEIFVV True H1975_Epitope_Rep3 1029.5131106231697 1029.51200993586 48.884 2 0.15634302703756583 0.0008658797794285193 0.9438714419765777 ['ENSG00000108592|ENST00000427159|FTSJ3'] 106026 20612 SVLNVLHSL True PC9_epitope_Rep1 980.5654805492 980.56438993586 84.101 2 0.15634243146110485 0.0008658797794285193 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 75984 10482 NRIANQVAI True PC9_epitope_Rep1 997.5668775315298 997.56578993586 45.207 2 0.15634192234952843 0.0008658797794285193 0.9438714419765777 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 44889 18874 IQDEEFYTL True PC9_epitope_Rep6 1156.5288202569598 1156.5277299358602 85.247 2 0.15633499269835624 0.0008658797794285193 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 52305 12234 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54290993586 51.917 2 0.15633425111629248 0.0008658797794285193 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 105309 8549 STTQVVGILK True NCI_RA007_Epitope_Rep5 1044.6179100448799 1044.6168099358601 39.567 2 0.15633033369324983 0.0008658797794285193 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 89459 5452 REQEITAVQA True H1975_Epitope_Rep2 1143.58840082175 1143.58787496793 25.999 1 0.1563294549827291 0.0008658797794285193 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 107455 5622 SYVTTSTRTYS True NCI_RA007_Epitope_Rep5 1264.5935457718401 1264.59244993586 28.315 2 0.15632021887845088 0.0008658797794285193 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 21628 7145 ERSSYYKSL True PC9_epitope_Rep5 1131.55603806431 1131.55438490379 32.452 3 0.15631875714794474 0.0008658797794285193 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 65231 8994 LSEDYGVLK True NCI_RA007_Epitope_Rep1 1022.5284263341399 1022.5273299358599 38.987 2 0.15631634544377565 0.0008658797794285193 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF'] 74881 8286 NLQTVNVDEN True NCI_RA007_Epitope_Rep1 1144.53603089572 1144.5349299358602 36.231 2 0.1563135882791869 0.0008658797794285193 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 47735 12090 IYQKAFEHL True PC9_epitope_Rep3 1147.6025943339098 1147.60093490379 51.546 3 0.1563082602509697 0.0008658797794285193 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 4118 8650 AHTAEVNCL True PC9_epitope_Rep5 956.43856578392 956.43746993586 38.216 2 0.15630604668145154 0.0008658797794285193 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 54339 9198 KYQEVTNNL True PC9_epitope_Rep1 1107.5560380643099 1107.5549499358601 40.231 2 0.15630497685669612 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 9878 22426 AYMQEPLFVEF True PC9_epitope_Rep4 1372.6373251601196 1372.63622993586 94.493 2 0.1563012778399435 0.0008658797794285193 0.9438714419765777 ['ENSG00000273611|ENST00000617429|ZNHIT3'] 96765 8341 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48036993586 37.036 2 0.15629577278752382 0.0008658797794285193 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 127121 19129 VQDEFLEKL True PC9_epitope_Rep3 1119.5811901829898 1119.58008993586 78.801 2 0.1562895685112721 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 33270 14488 GLAPPQHLIRV True PC9_epitope_Rep5 1199.71387611839 1199.71222490379 60.729 3 0.15628903449554918 0.0008658797794285193 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53'] 48303 9482 KDLYANTVL True H1975_Epitope_Rep1 1035.5600608155898 1035.5589699358602 41.392 2 0.15628677108763955 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 31373 8044 GEAPVPASV True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 35.892 1 0.15628262755037356 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 105712 10204 SVHKGFAFV True PC9_epitope_Rep2 990.5287011176598 990.52760993586 44.586 2 0.15627728386173145 0.0008658797794285193 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 93863 4219 RVFTGVVTK True NCI_RA007_Epitope_Rep3 1005.5971150306499 1005.59600993586 23.255 2 0.15627699907225348 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 112983 15792 TPSPLPTV True PC9_epitope_Rep1 810.4487194614601 810.44762993586 65.559 2 0.1562723302094196 0.0008658797794285193 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 43601 19879 IIIDSVPEV True PC9_epitope_Rep4 983.55391280599 983.55280993586 84.597 2 0.1562685163396515 0.0008658797794285193 0.9438714419765777 ['ENSG00000174306|ENST00000683867|ZHX3', 'nc|ENSG00000174306|Q9H4I2-2|ZHX3'] 96572 10535 SELPVSEVA True H1975_Epitope_Rep2 929.47057710485 929.47002496793 45.544 1 0.15626785869317195 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 137172 15115 YLDQMEDLY True H1975_Epitope_Rep3 1188.50089125696 1188.49978993586 63.539 2 0.15626033887336718 0.0008658797794285193 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3'] 2855 13349 AEWLGVLKA True NCI_RA007_Epitope_Rep4 985.5596668927699 985.55856993586 58.497 2 0.15625947127907058 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 99909 22832 SLIADLEQL True PC9_epitope_Rep2 1000.5440763982799 1000.54357496793 93.312 1 0.1562418630784848 0.0008658797794285193 0.9438714419765777 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 101914 12299 SPLLLQAKA True PC9_epitope_Rep5 939.5753169569099 939.57420993586 52.298 2 0.15623982266992922 0.0008658797794285193 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 138311 16469 YRAPELLL True PC9_epitope_Rep6 973.5596668927699 973.55856993586 75.767 2 0.15623848155383582 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'CDK19|p.G207V|2|0.16|ENSG00000155111|chr6:110632056-110632056|C/A|missense_variant', 'ENSG00000155111|ENST00000368911|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'CDK8|p.H300Qfs*3|1|0.14|ENSG00000132964|chr13:26397191-26397192|AT/-|frameshift_variant', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 127058 18353 VPYPPLLRA True PC9_epitope_Rep3 1024.6069514383598 1024.60584993586 75.806 2 0.15623215728461498 0.0008658797794285193 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 3953 14042 AHDVDPIEL True PC9_epitope_Rep4 1007.4923751785899 1007.49126993586 61.923 2 0.15622829417861434 0.0008658797794285193 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 94677 13115 RYLEKPMEI True PC9_epitope_Rep1 1177.6165301458898 1177.61488490379 55.315 3 0.1562243808227707 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 107705 16975 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.5744349679301 70.541 1 0.1562215553249682 0.0008658797794285193 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 6122 9673 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 42.156 2 0.15622038024398402 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 31211 18809 GDLENAFLNL True H1975_Epitope_Rep1 1104.54513902744 1104.5440499358601 78.429 2 0.1562193287630687 0.0008658797794285193 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 115304 17157 TVDPASLWEY True H1975_Epitope_Rep3 1179.54480467427 1179.54427496793 71.628 1 0.15621769510808145 0.0008658797794285193 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 75667 16518 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53856993586 68.361 2 0.1562111461023468 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 113918 15271 TRIGLINDM True PC9_epitope_Rep4 1031.54336520563 1031.54226993586 66.67 2 0.15620950611933299 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.P364L|1|0.32|ENSG00000107581|chr10:119065430-119065430|G/A|missense_variant'] 132230 18937 VYKPVSIYL True PC9_epitope_Rep5 1080.6219327961599 1080.62082993586 77.864 2 0.15620652948507707 0.0008658797794285193 0.9438714419765777 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 116208 20468 TVTSDLLQV True PC9_epitope_Rep5 974.5284263341399 974.5273299358599 83.767 2 0.1562064889491453 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 53301 9744 KTLTGKTITL True PC9_epitope_Rep1 1074.6648602373 1074.66376993586 42.34 2 0.15620611735320714 0.0008658797794285193 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 53613 18097 KVYLEDGFAYV True PC9_epitope_Rep6 1302.6496040959798 1302.6485099358601 82.246 2 0.15620213665911692 0.0008658797794285193 0.9438714419765777 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 131625 10655 VWAAVPGKTF True NCI_RA007_Epitope_Rep3 1074.58621599378 1074.5851099358601 48.96 2 0.1561999104599914 0.0008658797794285193 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 22345 4859 ETEKMIEKY True H1975_Epitope_Rep3 1169.5638258666897 1169.56272993586 23.816 2 0.15619944479521697 0.0008658797794285193 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 88420 12319 QYSDINNRW True PC9_epitope_Rep5 1194.5417849825 1194.5406899358602 52.376 2 0.15619454325772628 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 130941 10428 VVINYSIVK True NCI_RA007_Epitope_Rep1 1033.6171817688898 1033.6160899358601 44.546 2 0.15618831215437964 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 73864 17059 NHFPGSFQI True PC9_epitope_Rep4 1045.49812926537 1045.4970299358602 73.613 2 0.1561854777813758 0.0008658797794285193 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 48798 2955 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 15.61 2 0.1561771113541708 0.0008658797794285193 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 63954 13579 LQADPSVSV True PC9_epitope_Rep1 914.47091145802 914.46980993586 57.088 2 0.15617498795131454 0.0008658797794285193 0.9438714419765777 ['ENSG00000119686|ENST00000238667|FLVCR2'] 80266 15989 PLDQTPLFY True H1975_Epitope_Rep2 1092.54916177872 1092.5480699358602 66.7 2 0.15617309413446556 0.0008658797794285193 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000514312.1_1_5:10415712-10417549:+|nuORF', 'ENST00000505253.1_1_5:10413496-10422048:+|nuORF'] 104772 7328 STDPEALHY True H1975_Epitope_Rep2 1031.45598966987 1031.4548899358601 33.127 2 0.1561618499740183 0.0008658797794285193 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 136610 13268 YIDAQFEAY True H1975_Epitope_Rep1 1118.49204082542 1118.49147496793 56.134 1 0.1561517626730806 0.0008658797794285193 0.9438714419765777 ['ENSG00000154997|ENST00000388975|SEPTIN14', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11'] 52143 20239 KLVGEFLEV True PC9_epitope_Rep1 1032.5855472874398 1032.5844499358602 82.676 2 0.15615067173904204 0.0008658797794285193 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 44848 19705 IPYHIVNIV True PC9_epitope_Rep3 1066.6175161220601 1066.61640993586 81.024 2 0.15615061450729842 0.0008658797794285193 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 11713 15988 DHFNAMTSL True PC9_epitope_Rep2 1034.4491304676199 1034.4480299358602 66.751 2 0.1561497752040939 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 130683 14558 VVDEIFNEY True H1975_Epitope_Rep2 1126.51825557326 1126.51714993586 61.154 2 0.15614824179568002 0.0008658797794285193 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 138338 11179 YRAQPSVSL True PC9_epitope_Rep1 1019.5399940773499 1019.53888993586 47.884 2 0.1561451154779667 0.0008658797794285193 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 77456 19964 NYNQHAMVFF True PC9_epitope_Rep5 1269.5600778989299 1269.5589899358602 81.846 2 0.1561447492780348 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130912815-130915395:+|nuORF', 'ENST00000488391.5_1_9:130913785-130915395:+|nuORF'] 132896 20167 VYTSVVEEL True PC9_epitope_Rep5 1037.5280919809697 1037.52698993586 82.622 2 0.15614384469112638 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 129943 5845 VTNDGATILK True NCI_RA007_Epitope_Rep4 1030.56587447202 1030.56476993586 29.107 2 0.1561368331474885 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF', 'ENST00000550455.5_1_12:69979244-69981425:+|nuORF', 'ENST00000546859.5_1_12:69979244-69981900:+|nuORF', 'ENST00000550638.5_1_12:69979244-69982049:+|nuORF'] 10101 18524 AYVPGFAHI True PC9_epitope_Rep3 973.5021520166499 973.50104993586 76.47 2 0.1561346493611693 0.0008658797794285193 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 113591 8097 TRAGPGTLSV True PC9_epitope_Rep2 957.52434401321 957.52324993586 36.503 2 0.15612799629117638 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 3874 10142 AHDDGRWSL True PC9_epitope_Rep1 1055.47845644995 1055.47734993586 43.887 2 0.15612509742572417 0.0008658797794285193 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 114058 8989 TRNPVSEEL True PC9_epitope_Rep2 1043.52473793603 1043.52364993586 39.93 2 0.15612002237667985 0.0008658797794285193 0.9438714419765777 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.C424Afs*36|1|0.25|ENSG00000168411|chr16:74636502-74636502|A/-|frameshift_variant'] 107288 13397 SYQKVMALW True NCI_RA007_Epitope_Rep5 1124.5688516774799 1124.56774993586 58.218 2 0.1561144056793479 0.0008658797794285193 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 109594 12275 THDEAINVL True PC9_epitope_Rep2 1010.5032742154599 1010.50216993586 52.525 2 0.15610774648938533 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 138949 14195 YSEIKDFLSY True H1975_Epitope_Rep1 1263.60231955039 1263.6012299358601 59.779 2 0.15610643971172836 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-4|DCLRE1C', 'ENST00000492201.5_1_10:14962436-14970058:-|nuORF'] 126379 21740 VPLEFPVVA True PC9_epitope_Rep2 969.5535188831699 969.55297496793 89.1 1 0.15610278825713048 0.0008658797794285193 0.9438714419765777 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 28452 9867 FSENSENISY True H1975_Epitope_Rep2 1188.4934973774 1188.49240993586 42.94 2 0.15609824402533742 0.0008658797794285193 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 4328 11786 AIMDPLPLR True NCI_RA007_Epitope_Rep3 1024.57393705792 1024.57282993586 53.477 2 0.15609812287394684 0.0008658797794285193 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 82120 17067 PTDAFTVFY True H1975_Epitope_Rep2 1059.49131254943 1059.49020993586 70.911 2 0.1560961433423896 0.0008658797794285193 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 26255 20015 FIAKSFYDL True PC9_epitope_Rep5 1102.5698972233 1102.5688099358601 82.039 2 0.15608439608016073 0.0008658797794285193 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 68722 16707 LVDEWLDSY True H1975_Epitope_Rep1 1138.51825557326 1138.51767496793 69.659 1 0.15608253637927533 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 13201 17539 DLTEYLSR True PC9_epitope_Rep2 995.49237517859 995.49126993586 72.732 2 0.15607934274952998 0.0008658797794285193 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 52707 5708 KQKVDSLL True NCI_RA007_Epitope_Rep4 929.5545815123298 929.55348993586 28.57 2 0.15607761578370508 0.0008658797794285193 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000556181.1_1_14:58988389-58988443:+|nuORF'] 123125 15813 VHDEGVWAL True PC9_epitope_Rep6 1024.4977949121999 1024.49668993586 73.087 2 0.15607378125448193 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 28396 11660 FSDVDSPYY True H1975_Epitope_Rep3 1091.44475627983 1091.44364993586 49.985 2 0.1560721227362338 0.0008658797794285193 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 39897 18679 HQLALISQL True PC9_epitope_Rep2 1021.59202965021 1021.59092993586 77.215 2 0.15606814076516087 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 124808 17624 VLLGKVYVV True PC9_epitope_Rep4 988.63210355704 988.63100993586 75.811 2 0.1560622959400723 0.0008658797794285193 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24|p.G413S|1|0.3|ENSG00000114796|chr3:183671046-183671046|G/A|missense_variant'] 6132 8053 APNLQNQQV True PC9_epitope_Rep6 1010.5145076055 1010.51340993586 40.466 2 0.15605850554149733 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 123533 8341 VIIEGDLER True H1975_Epitope_Rep3 1042.56587447202 1042.56476993586 37.069 2 0.15604891392782663 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF'] 49323 9859 KIAPNTPQL True PC9_epitope_Rep2 980.5654805492 980.56438993586 43.256 2 0.1560467608670073 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 14862 12782 DYFEQYGK True PC9_epitope_Rep2 1048.4501760134401 1048.44906993586 54.469 2 0.1560418842482802 0.0008658797794285193 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 4083 19088 AHSNEILIF True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 78.788 2 0.15604041286196463 0.0008658797794285193 0.9438714419765777 ['ENST00000554115.5_1_14:50249154-50249313:+|nuORF', 'ENSG00000165516|ENST00000298307|KLHDC2'] 102749 5036 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 24.229 2 0.1560263902884719 0.0008658797794285193 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 22063 6175 ESSAGGSFTVR True PC9_epitope_Rep2 1096.51490152832 1096.51380993586 29.143 2 0.15602313194856818 0.0008658797794285193 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000436135.1_1_1:158493653-158493989:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1'] 42680 17958 IEVIEIMTDR True PC9_epitope_Rep6 1217.63257413285 1217.6314699358602 81.704 2 0.1560186463867093 0.0008658797794285193 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000397777.3_1_9:4945096-4945213:-|nuORF'] 22227 13291 ETDLLDIRSEY True H1975_Epitope_Rep1 1352.64597526752 1352.6454749679299 56.227 1 0.15601372422841966 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 69932 16684 LYDPVISKL True PC9_epitope_Rep6 1046.6011973515801 1046.60010993586 76.645 2 0.15601363120750128 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 35668 7130 GTM[Oxidation]TGMLYK True NCI_RA007_Epitope_Rep4 1016.46708941132 1016.46598993586 34.045 2 0.1560117886586176 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 94430 16520 RYFKGPELL True PC9_epitope_Rep1 1121.6233297784897 1121.62222993586 68.368 2 0.15600984044464197 0.0008658797794285193 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'CSNK2A1|p.D205H|1|0.1|ENSG00000101266|chr20:492262-492262|C/G|missense_variant', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 47266 23794 IYEPNFIFF True PC9_epitope_Rep2 1188.5855472874398 1188.5844499358602 96.996 2 0.15600714384417852 0.0008658797794285193 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 102869 14345 SQHGVIIQL True PC9_epitope_Rep4 993.5607295219299 993.55962993586 63.082 2 0.15598728297182518 0.0008658797794285193 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 87346 11602 QTDDPDVGLAY True H1975_Epitope_Rep2 1192.5247975056798 1192.52370993586 49.694 2 0.15597658450203308 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000182871|P39060-1|COL18A1', 'nc|ENSG00000182871|P39060|COL18A1', 'ENSG00000182871|ENST00000651438|COL18A1'] 43657 22640 IILPEDIEL True PC9_epitope_Rep5 1053.59577761797 1053.59468993586 92.085 2 0.15597609358518197 0.0008658797794285193 0.9438714419765777 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 93931 17300 RVLDELTLA True PC9_epitope_Rep4 1028.5866099165999 1028.58550993586 74.547 2 0.15597320954271854 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 55468 15509 LAVDAVIAELK True NCI_RA007_Epitope_Rep2 1140.675424921 1140.6743299358602 65.032 2 0.15596199392741122 0.0008658797794285193 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 35657 8093 GTMTGMLYK True NCI_RA007_Epitope_Rep3 1000.47217441132 1000.47106993586 38.931 2 0.15596047480994557 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 123819 20423 VIVELIYKV True PC9_epitope_Rep2 1074.6688829885798 1074.6677899358601 83.984 2 0.15595773583214045 0.0008658797794285193 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 113846 12799 TREEGVLTL True PC9_epitope_Rep4 1016.5502244078798 1016.54912993586 57.092 2 0.15595040313377187 0.0008658797794285193 0.9438714419765777 ['ENSG00000108528|ENST00000225665|SLC25A11', 'ENST00000574710.1_1_17:4841038-4842521:-|nuORF', 'nc|ENSG00000108528|Q02978-2|SLC25A11', 'ENST00000570543.1_1_17:4841583-4841851:-|nuORF'] 104412 12422 SSIDGLHQI True PC9_epitope_Rep5 968.49270953176 968.49160993586 52.78 2 0.155950369757455 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 49385 19408 KIIGIMEEV True PC9_epitope_Rep1 1030.5732683515798 1030.57216993586 79.463 2 0.15595032973808412 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 75881 17096 NRDPILVSL True PC9_epitope_Rep4 1025.58694426977 1025.58584993586 73.759 2 0.15594974115026453 0.0008658797794285193 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 96545 11614 SELPGAFEA True NCI_RA007_Epitope_Rep3 919.4287122928699 919.42816496793 52.806 1 0.15594736617905455 0.0008658797794285193 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 1565 5879 AEFAERTVA True NCI_RA007_Epitope_Rep4 992.4927095317599 992.49160993586 29.238 2 0.15594717688650264 0.0008658797794285193 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 103560 14338 SRDEGSLLL True PC9_epitope_Rep5 988.5189242795999 988.51782993586 60.152 2 0.15593946969533642 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000132128|Q15345-3|LRRC41', 'ENSG00000132128|ENST00000617190|LRRC41'] 57452 9226 LEIPPPKPP True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 40.482 2 0.15593897669111886 0.0008658797794285193 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 132331 20786 VYLPPEAFTF True PC9_epitope_Rep6 1182.5961119711399 1182.5950099358602 92.72 2 0.1559381200520142 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 84658 5036 QHEGGVQEL True PC9_epitope_Rep2 995.46722305991 995.46612993586 24.741 2 0.15593693450108956 0.0008658797794285193 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 33017 9585 GIYAYGFEK True NCI_RA007_Epitope_Rep3 1046.50729696674 1046.5061899358602 44.786 2 0.1559360790761354 0.0008658797794285193 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000465222.1_1_3:186502277-186502505:+|nuORF', 'ENST00000485101.5_1_3:186501384-186502505:+|nuORF', 'ENST00000486805.5_1_3:186501384-186502505:+|nuORF', 'ENST00000584054.5_1_17:7476159-7478064:+|nuORF', 'ENST00000467585.1_1_3:186502182-186503751:+|nuORF', 'ENST00000575957.1_1_17:78115565-78120760:-|nuORF', 'ENST00000582848.5_1_17:7476159-7480015:+|nuORF', 'ENST00000584901.5_1_17:7476159-7480015:+|nuORF', 'nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000584712.5_1_17:7476159-7478717:+|nuORF', 'ENST00000580461.5_1_17:7476163-7478717:+|nuORF'] 7967 15407 ATDLDVANFY True H1975_Epitope_Rep2 1127.51350454599 1127.5124099358602 64.421 2 0.15593518470255108 0.0008658797794285193 0.9438714419765777 ['ENSG00000142252|ENST00000270257|GEMIN7'] 76774 15080 NVDAILEEY True H1975_Epitope_Rep2 1064.50260550912 1064.50207496793 63.156 1 0.1559268603969523 0.0008658797794285193 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2'] 117419 10252 VADLVENSY True H1975_Epitope_Rep3 1008.4763907612801 1008.47587496793 44.483 1 0.15592365019742507 0.0008658797794285193 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 106364 4956 SVSNVVITK True NCI_RA007_Epitope_Rep3 945.54949613189 945.5489449679301 26.491 1 0.1559220268730049 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 37781 15371 HAYIISSL True PC9_epitope_Rep2 902.4861675993401 902.48506993586 64.407 2 0.1559164831314128 0.0008658797794285193 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 105098 17024 STLHLVLRL True PC9_epitope_Rep4 1050.65496425994 1050.65386993586 73.476 2 0.15589683202825264 0.0008658797794285193 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 17469 19187 EHGNFLITV True PC9_epitope_Rep5 1028.52909504048 1028.5279899358602 78.842 2 0.15589322341135106 0.0008658797794285193 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 91833 14138 RPNDIMAEV True PC9_epitope_Rep3 1043.50697969691 1043.50588993586 59.467 2 0.15589261607688326 0.0008658797794285193 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 87058 7194 QSDVIHQSVY True H1975_Epitope_Rep2 1174.56185172074 1174.56074993586 32.606 2 0.1558882545508262 0.0008658797794285193 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 65358 12504 LSEPEEAAALY True H1975_Epitope_Rep2 1191.5659340416698 1191.5648299358602 53.188 2 0.1558706748373935 0.0008658797794285193 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant'] 29250 19961 FVDEYDPTI True PC9_epitope_Rep5 1097.49170647225 1097.4906099358602 81.833 2 0.15586861777115596 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 89384 15635 REMFIWAVA True H1975_Epitope_Rep2 1121.56918603065 1121.5680899358601 65.294 2 0.155861430070278 0.0008658797794285193 0.9438714419765777 ['ENST00000346128.10_1_15:30114303-30114552:-|nuORF'] 103324 16226 SQVDRLVAL True PC9_epitope_Rep5 999.5712942056298 999.57018993586 67.402 2 0.15585243213236502 0.0008658797794285193 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 45456 15620 ISEENFRVM True PC9_epitope_Rep5 1123.53319444475 1123.53208993586 65.093 2 0.15584925979964157 0.0008658797794285193 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 115425 15898 TVFDEAIRA True PC9_epitope_Rep5 1020.5240096600398 1020.52290993586 66.142 2 0.15584827108396257 0.0008658797794285193 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 139098 10448 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 45.203 2 0.15584401854662044 0.0008658797794285193 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 76308 11183 NSDVVEQIY True H1975_Epitope_Rep3 1065.49785448185 1065.49727496793 48.113 1 0.15584391909425085 0.0008658797794285193 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 6753 19461 AQEDYLFSV True PC9_epitope_Rep6 1070.49204082542 1070.49094993586 87.519 2 0.15584195137681517 0.0008658797794285193 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 65118 10286 LSDPGSGLY True H1975_Epitope_Rep3 907.4287122928699 907.42816496793 44.616 1 0.15583895861365976 0.0008658797794285193 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 115911 11931 TVPIYEGY True H1975_Epitope_Rep3 940.4541987647199 940.4536549679301 51.048 1 0.15583822095106523 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000415776.1_1_Y:19869357-19869702:-|nuORF', 'ACTG1|p.P172S|1|0.43|ENSG00000184009|chr17:81511476-81511476|G/A|missense_variant', 'ENST00000415794.1_1_3:139212993-139213512:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 23865 13142 EYMEHVYLI True NCI_RA007_Epitope_Rep3 1195.5583465634297 1195.55724993586 58.968 2 0.15583651101644544 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 91154 17296 RLPETLPSL True PC9_epitope_Rep4 1024.59169529704 1024.5905899358602 74.532 2 0.15583536096806516 0.0008658797794285193 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 15240 5029 EAGEQGDIEPR True PC9_epitope_Rep3 1199.5418445521498 1199.54074993586 24.432 2 0.15583364150074627 0.0008658797794285193 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 14020 21176 DRYQYPFVL True PC9_epitope_Rep5 1199.5975089534697 1199.59640993586 86.503 2 0.1558232726417286 0.0008658797794285193 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2', 'SGPP2|p.M182I|1|0.33|ENSG00000163082|chr2:222521934-222521934|G/A|missense_variant'] 109641 10801 THDLEGPPL True PC9_epitope_Rep4 977.4818104948899 977.48070993586 49.305 2 0.15582236678277236 0.0008658797794285193 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 40351 7944 HRTDSEIAL True PC9_epitope_Rep5 1040.5250722892 1040.5239699358601 35.496 2 0.1558177573316773 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 136132 15948 YGGLIFNSY True H1975_Epitope_Rep2 1032.4916469026 1032.49107496793 66.542 1 0.15581480138722814 0.0008658797794285193 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 77453 20032 NYNQHAMVFF True PC9_epitope_Rep1 1269.5600778989299 1269.5589899358602 81.88 2 0.15580733999376042 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130912815-130915395:+|nuORF', 'ENST00000488391.5_1_9:130913785-130915395:+|nuORF'] 8713 19130 AVDLTLPKV True PC9_epitope_Rep1 954.57498260374 954.57388993586 78.376 2 0.15580641003970574 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 131786 11985 VYAILTHGI True NCI_RA007_Epitope_Rep5 985.5596668927699 985.55856993586 52.761 2 0.1558025361162194 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 70019 14764 LYGKIAEAF True PC9_epitope_Rep6 1010.5436824754598 1010.54258993586 68.742 2 0.15579588328671087 0.0008658797794285193 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 71303 20932 MHDFNLISI True PC9_epitope_Rep3 1088.53246616876 1088.53136993586 85.792 2 0.15579364591250286 0.0008658797794285193 0.9438714419765777 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 85180 17915 QKDSLVINI True PC9_epitope_Rep1 1028.5866099165999 1028.58550993586 73.703 2 0.15579177283065157 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 4101 9770 AHSPSLQSL True PC9_epitope_Rep2 938.48214484806 938.48104993586 42.919 2 0.15578650807865785 0.0008658797794285193 0.9438714419765777 ['ENSG00000079313|ENST00000170168|REXO1'] 91647 12199 RPFQGTMGV True PC9_epitope_Rep5 991.4909357099498 991.48982993586 51.909 2 0.15578518468279404 0.0008658797794285193 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 7191 15639 ARDETEFYL True PC9_epitope_Rep4 1142.5244035828598 1142.5233099358602 68.081 2 0.15578358533175696 0.0008658797794285193 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 140556 21143 YYLNEIQSF True PC9_epitope_Rep2 1175.5498900547097 1175.5487899358602 86.781 2 0.15578076087525003 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 67509 16012 LTELPDWSY True H1975_Epitope_Rep3 1122.5233409537 1122.52277496793 67.047 1 0.15576982526649633 0.0008658797794285193 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 31140 8773 GDAGAEYVVE True H1975_Epitope_Rep3 1008.4400052525599 1008.4394749679301 38.753 1 0.15576616962580783 0.0008658797794285193 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6645960-6646242:+|nuORF', 'ENST00000425487.2_1_X:46299833-46299950:-|nuORF', 'ENST00000507324.1_1_15:64821358-64821781:-|nuORF'] 139352 8855 YTDSYTDTY True H1975_Epitope_Rep2 1127.42950013851 1127.4284099358601 39.027 2 0.15576441502216676 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 21481 4479 ERQPGAASL True PC9_epitope_Rep4 927.4773938207899 927.47628993586 23.696 2 0.15576347279450387 0.0008658797794285193 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 99170 22083 SLAQYLINV True PC9_epitope_Rep2 1019.5651461960299 1019.5645749679301 90.414 1 0.15575540377682723 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 1631 9150 AEFVEVTK True PC9_epitope_Rep3 921.4807478657299 921.47964993586 40.138 2 0.15575096643838096 0.0008658797794285193 0.9438714419765777 ['CON__P02769'] 112197 16567 TLVYHVVGV True PC9_epitope_Rep1 985.5596668927699 985.55856993586 68.548 2 0.15574860101917606 0.0008658797794285193 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 1000 8337 AEAEPEPELA True H1975_Epitope_Rep1 1054.4818700645399 1054.48076993586 36.999 2 0.15574351637904116 0.0008658797794285193 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion'] 135249 12481 YAYDGKDYLAL True NCI_RA007_Epitope_Rep4 1290.6132185872598 1290.6121299358601 55.019 2 0.1557348960061155 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 99434 9841 SLEIDLDSM[Oxidation]R True H1975_Epitope_Rep1 1193.55980349585 1193.5587099358602 42.784 2 0.15572508010623132 0.0008658797794285193 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000534205.1_1_11:35881882-35882566:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'CON__H-INV:HIT000015463', 'ENST00000452408.1_1_6:28937132-28937360:-|nuORF'] 40651 20084 HTILDLPAV True PC9_epitope_Rep2 977.55458151233 977.55348993586 82.661 2 0.15572365552211115 0.0008658797794285193 0.9438714419765777 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 93945 19952 RVLPDVLQV True PC9_epitope_Rep1 1037.6233297784897 1037.62222993586 81.568 2 0.15572219239062224 0.0008658797794285193 0.9438714419765777 ['ENSG00000162729|ENST00000314485|IGSF8', 'nc|ENSG00000162729|Q969P0-3|IGSF8'] 77171 22868 NYGDYFNVF True PC9_epitope_Rep1 1137.47672511445 1137.47562993586 92.755 2 0.15571827458278345 0.0008658797794285193 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 38259 8243 HFC[Carbamidomethyl]GGSLINSQ True NCI_RA007_Epitope_Rep2 1218.54515639021 1218.5440499358601 36.7 2 0.15571543345470532 0.0008658797794285193 0.9438714419765777 ['CON__P00761'] 34710 17879 GQMGSFIRL True PC9_epitope_Rep4 1007.5222358382299 1007.52112993586 76.812 2 0.15571107540825432 0.0008658797794285193 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 114241 15500 TRYIAPTVL True PC9_epitope_Rep1 1032.5967806774797 1032.59568993586 64.443 2 0.1557090665290747 0.0008658797794285193 0.9438714419765777 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000472059.5_1_17:19558694-19578882:+|nuORF', 'ENST00000476965.5_1_17:19559657-19578882:+|nuORF'] 88217 17530 QYASLMHSF True PC9_epitope_Rep1 1082.48551597634 1082.4844099358602 72.223 2 0.15570606630305023 0.0008658797794285193 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 113082 6578 TPYKQEINA True PC9_epitope_Rep5 1062.53457434374 1062.53346993586 30.272 2 0.155701829697707 0.0008658797794285193 0.9438714419765777 ['ENSG00000138356|ENST00000374700|AOX1'] 116500 9379 TYDNVHQQF True PC9_epitope_Rep3 1150.5043368446202 1150.5032299358602 41.015 2 0.15570048968800934 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 2027 5228 AELDDTPM[Oxidation]R True PC9_epitope_Rep1 1062.46517483502 1062.4640699358602 24.959 2 0.1556951979914774 0.0008658797794285193 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 76198 10156 NRVGDTITV True PC9_epitope_Rep1 973.5192586327701 973.51816993586 43.941 2 0.1556890742856645 0.0008658797794285193 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 61850 20875 LLLDVPTAAV True PC9_epitope_Rep4 1010.6011973515799 1010.6006749679301 88.451 1 0.15568421917386144 0.0008658797794285193 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 33333 7622 GLDSANEKGLY True H1975_Epitope_Rep3 1165.5615173675699 1165.5604299358602 34.299 2 0.15568410504521266 0.0008658797794285193 0.9438714419765777 ['ENSG00000096060|ENST00000357266|FKBP5'] 83102 21373 PYNPILGETF True PC9_epitope_Rep2 1149.57062549929 1149.5695299358601 87.68 2 0.15567972740685163 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 130458 16212 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 70.303 2 0.15567939992419536 0.0008658797794285193 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 45416 9071 ISDSDYQAEY True H1975_Epitope_Rep3 1189.47751296009 1189.47697496793 39.877 1 0.15567813580338663 0.0008658797794285193 0.9438714419765777 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3'] 127041 18806 VPYLVGQVV True PC9_epitope_Rep6 972.5644179200399 972.56332993586 84.979 2 0.15567665887409046 0.0008658797794285193 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 43253 21365 IHDGFGFML True PC9_epitope_Rep1 1035.48478770035 1035.4836899358602 87.012 2 0.15566437643033296 0.0008658797794285193 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 21000 5450 ERAPGETAL True PC9_epitope_Rep4 942.4770594676199 942.47596993586 27.703 2 0.1556622985265438 0.0008658797794285193 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 96947 8461 SEVESPAVP True H1975_Epitope_Rep2 913.4392769765699 913.43872496793 37.499 1 0.15565864016597022 0.0008658797794285193 0.9438714419765777 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10', 'ENST00000459751.1_1_10:13234503-13237290:+|nuORF'] 35705 5246 GTQTVFPSK True NCI_RA007_Epitope_Rep5 963.5025459394699 963.50144993586 26.876 2 0.15565634554507704 0.0008658797794285193 0.9438714419765777 ['ENSG00000156463|ENST00000359120|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-3|SH3RF2', 'nc|ENSG00000156463|Q8TEC5-2|SH3RF2', 'ENST00000511705.1_1_5:145435703-145442261:+|nuORF'] 117190 12144 TYTDVTPRQF True PC9_epitope_Rep4 1226.59315184902 1226.5920499358601 54.528 2 0.15565511318249373 0.0008658797794285193 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 25865 4551 FGGPGTASRPS True NCI_RA007_Epitope_Rep2 1032.49885754136 1032.49776993586 22.331 2 0.15564698920459372 0.0008658797794285193 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 63316 22390 LPDIFEAQIA True PC9_epitope_Rep1 1115.58627556343 1115.5851699358602 90.941 2 0.15564351366237167 0.0008658797794285193 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 23867 13571 EYMEHVYLI True NCI_RA007_Epitope_Rep5 1195.5583465634297 1195.55724993586 58.889 2 0.15564139955541909 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 114174 8612 TRSTFSTNY True PC9_epitope_Rep5 1075.49343780775 1075.4923499358601 38.07 2 0.1556406041904762 0.0008658797794285193 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 24653 17342 FASPTQVFF True H1975_Epitope_Rep2 1042.5123823471797 1042.51128993586 72.0 2 0.15563949670135682 0.0008658797794285193 0.9438714419765777 ['ENSG00000099624|ENST00000215375|ATP5F1D'] 88222 14623 QYASRFVQL True PC9_epitope_Rep4 1110.5821932425 1110.58108993586 64.177 2 0.15563575492577159 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000142731|O00444-2|PLK4', 'ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-3|PLK4', 'ENST00000507454.1_1_4:128812246-128813710:+|nuORF'] 87639 5980 QTYVGITEK True NCI_RA007_Epitope_Rep5 1037.5393253710097 1037.53822993586 29.685 2 0.15563128651978092 0.0008658797794285193 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 32668 19678 GHMPVPIPSL True PC9_epitope_Rep2 1046.55828699378 1046.5571899358602 81.078 2 0.15562774826659023 0.0008658797794285193 0.9438714419765777 ['ENSG00000111145|ENST00000228741|ELK3', 'ENST00000549529.1_1_12:96649292-96660955:+|nuORF'] 11913 20105 DHSFSLEL True PC9_epitope_Rep5 946.4396113297399 946.43850993586 82.381 2 0.15562674861058112 0.0008658797794285193 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 43313 9556 IHEPEPHIL True PC9_epitope_Rep4 1083.57129420563 1083.57018993586 44.373 2 0.15562541772987526 0.0008658797794285193 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 72078 15564 M[Oxidation]RDPIRILV True PC9_epitope_Rep1 1127.64849936095 1127.64685490379 64.69 3 0.15562291906506046 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 138261 16512 YQVGVHYEL True PC9_epitope_Rep1 1106.5396597241802 1106.53856993586 68.337 2 0.1556223159746124 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 39789 14502 HQDPQSIFV True PC9_epitope_Rep5 1069.51925863277 1069.5181699358602 60.782 2 0.1556153134587006 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 138779 11159 YSDDNPYYNY True H1975_Epitope_Rep2 1312.48841199696 1312.4878749679299 47.961 1 0.15561518477810393 0.0008658797794285193 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 18062 17562 EIITIIHQV True PC9_epitope_Rep4 1064.6229954253201 1064.62188993586 75.57 2 0.1556106700431646 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 4648 16515 ALATLIHQV True PC9_epitope_Rep5 964.5705659296401 964.56946993586 68.525 2 0.15561029176311458 0.0008658797794285193 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 21100 8670 ERDPQSPEF True PC9_epitope_Rep1 1103.4883524273098 1103.48724993586 38.189 2 0.15560756183638905 0.0008658797794285193 0.9438714419765777 ['ENSG00000170903|ENST00000301919|MSANTD4'] 34812 7553 GQVALRTSL True NCI_RA007_Epitope_Rep3 943.54507945779 943.5439899358599 36.833 2 0.15560557943881131 0.0008658797794285193 0.9438714419765777 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 30539 18631 GAIPRLVQL True PC9_epitope_Rep2 965.6022004110898 965.60110993586 77.03 2 0.1556029817767372 0.0008658797794285193 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 76862 21928 NVIESFTEL True PC9_epitope_Rep3 1050.5233409537 1050.5222499358601 89.647 2 0.15559985755769246 0.0008658797794285193 0.9438714419765777 ['RAB40A|p.I163V|1|0.09|ENSG00000172476|chrX:103500270-103500270|T/C|missense_variant', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENSG00000197562|ENST00000248139|RAB40C'] 27732 12434 FQDPYTRSL True PC9_epitope_Rep6 1125.54547338061 1125.54436993586 59.256 2 0.15559758210174313 0.0008658797794285193 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 53429 12133 KVIDDTNITRL True PC9_epitope_Rep2 1286.7194149913 1286.7183099358601 51.979 2 0.15559543654565386 0.0008658797794285193 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 62429 21222 LLSEDFVSV True PC9_epitope_Rep3 1007.5175272972699 1007.51642993586 86.919 2 0.155593745242666 0.0008658797794285193 0.9438714419765777 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'nc|ENSG00000006282|Q8TB22-4|SPATA20', 'ENST00000503063.5_1_17:48625445-48628667:+|nuORF'] 13303 11390 DLYLENPEIK True H1975_Epitope_Rep1 1232.6288686514001 1232.6277699358602 48.79 2 0.15559140747449438 0.0008658797794285193 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 38774 11811 HHYEGAVVIL True PC9_epitope_Rep6 1136.5978433066398 1136.59674993586 56.627 2 0.1555899512823219 0.0008658797794285193 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 100253 20476 SLLQTLYKV True PC9_epitope_Rep1 1063.62774645259 1063.62664993586 83.573 2 0.155589344720682 0.0008658797794285193 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 28521 8518 FSHAQTVVL True NCI_RA007_Epitope_Rep4 1000.5341804209199 1000.53308993586 39.556 2 0.15558830376354377 0.0008658797794285193 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 88138 21145 QWPPDPPLHF True PC9_epitope_Rep3 1232.59784330664 1232.59674993586 86.62 2 0.1555813595098854 0.0008658797794285193 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 8483 8634 ATVAVPLVGK True NCI_RA007_Epitope_Rep3 953.5909670210499 953.58986993586 41.036 2 0.15557496553440378 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 124332 8251 VLDQGKITEY True H1975_Epitope_Rep2 1164.60265390356 1164.60154993586 36.69 2 0.15556944248109222 0.0008658797794285193 0.9438714419765777 ['ENSG00000135776|ENST00000344517|ABCB10'] 13883 6927 DRDPASGTAL True PC9_epitope_Rep2 1001.47778774361 1001.47668993586 32.045 2 0.15556689468198617 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 109605 10583 THDEAVQVL True PC9_epitope_Rep5 1010.5032742154598 1010.50216993586 45.695 2 0.15556414599785906 0.0008658797794285193 0.9438714419765777 ['ENSG00000101400|ENST00000217381|SNTA1', 'SNTA1|p.G203Afs*15|1|0.32|ENSG00000101400|chr20:33417812-33417812|C/-|frameshift_variant', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 94825 12566 RYLTVATVF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 56.668 2 0.15556381616293605 0.0008658797794285193 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 113730 18286 TRDEYLSLVA True PC9_epitope_Rep1 1165.59790287629 1165.5968099358602 75.127 2 0.15556324256662546 0.0008658797794285193 0.9438714419765777 ['MED15|p.V609Cfs*38|1|0.2|ENSG00000099917|chr22:20584875-20584875|G/-|frameshift_variant', 'MED15|p.Q615Afs*53|1|0.11|ENSG00000099917|chr22:20584891-20584892|-/A|frameshift_variant', 'MED15|p.A683Gfs*30|1|0.14|ENSG00000099917|chr22:20585181-20585182|-/G|frameshift_variant', 'ENSG00000099917|ENST00000263205|MED15', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15'] 95235 8743 SADETWDSA True NCI_RA007_Epitope_Rep1 980.37231961556 980.37122993586 38.01 2 0.15555734603105498 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 24406 22252 FAFQAEIAQL True PC9_epitope_Rep2 1136.5866099165999 1136.58550993586 91.069 2 0.15555570213647338 0.0008658797794285193 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 48552 4260 KEGKPPISV True H1975_Epitope_Rep3 953.5545815123298 953.55348993586 21.504 2 0.15554752717561462 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 7850 7000 ATAIGMPVEK True NCI_RA007_Epitope_Rep5 1015.5372171960299 1015.5361099358599 33.605 2 0.15554019362186283 0.0008658797794285193 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 75239 8606 NPKEFYHEV True PC9_epitope_Rep5 1161.54547338061 1161.54436993586 38.047 2 0.15553721481817281 0.0008658797794285193 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 89585 4270 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 22.757 2 0.15552325815435158 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 10812 14209 DAFVAIVQSVK True NCI_RA007_Epitope_Rep2 1175.6550238295902 1175.65392993586 59.932 2 0.15551642130822033 0.0008658797794285193 0.9438714419765777 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 44922 5133 IQEAGTEVVK True NCI_RA007_Epitope_Rep1 1072.5764391557198 1072.57534993586 24.048 2 0.1555115922383614 0.0008658797794285193 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 139565 5652 YTNFDAER True NCI_RA007_Epitope_Rep2 1014.4406739588999 1014.43956993586 26.599 2 0.15551112914357512 0.0008658797794285193 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 88395 21111 QYPVIIHLI True PC9_epitope_Rep1 1094.64881625034 1094.6477099358601 86.032 2 0.15550710013897462 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 8080 13855 ATEFIMNEY True H1975_Epitope_Rep2 1116.47976188956 1116.4786699358601 58.439 2 0.15550694646037005 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 14599 19924 DVIEEYFK True PC9_epitope_Rep1 1041.50187723313 1041.5007899358602 81.456 2 0.15550671352246392 0.0008658797794285193 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12'] 88271 15854 QYFPKAPEF True PC9_epitope_Rep6 1125.5494961318898 1125.54838993586 73.253 2 0.15550520196349665 0.0008658797794285193 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 9302 11066 AVSDGVIKV True PC9_epitope_Rep2 886.5123823471799 886.51128993586 47.883 2 0.15549831747009124 0.0008658797794285193 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 3935 13727 AHDTTLVAL True PC9_epitope_Rep1 939.50254593947 939.50144993586 57.649 2 0.15549588500105388 0.0008658797794285193 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 48048 18708 KALQFLEEV True PC9_epitope_Rep4 1075.5913609438699 1075.59026993586 80.04 2 0.15549567173665244 0.0008658797794285193 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 43031 8618 IGGIGTVPVGR True H1975_Epitope_Rep3 1024.6029286870798 1024.60182993586 38.143 2 0.15549256748463192 0.0008658797794285193 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 73858 18930 NHFPGSFQI True PC9_epitope_Rep1 1045.49812926537 1045.4970299358602 77.599 2 0.155489249278376 0.0008658797794285193 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 91762 9206 RPKPSSSPVIF True PC9_epitope_Rep2 1213.68190728377 1213.68025490379 40.751 3 0.15547628223268556 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 103428 22268 SQYPEIIFL True PC9_epitope_Rep4 1108.580461907 1108.57987496793 93.894 1 0.15547598291369635 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 73949 19545 NHLREIWEL True PC9_epitope_Rep1 1208.6302060640799 1208.62855490379 80.003 3 0.15547407278927752 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1', 'chr15:90981981-90984693|492|12.32|0.7|4.14|-|ENST00000557905|PRC1,PRC1', 'ENST00000557763.5_1_15:91524929-91537713:-|nuORF', 'PRC1|p.E226Kfs*52|1|0.16|ENSG00000198901|chr15:90981030-90981030|C/-|frameshift_variant', 'ENST00000555791.5_1_15:91527220-91537794:-|nuORF'] 49331 9801 KIDEHHFVAV True PC9_epitope_Rep5 1193.6193070272102 1193.61766490379 42.668 3 0.15547212188452572 0.0008658797794285193 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 103786 18067 SRFPYYNSL True PC9_epitope_Rep1 1145.55055876105 1145.54946993586 74.287 2 0.15547049423042753 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-4|DENND3', 'ENST00000518198.1_1_8:142138775-142151424:+|nuORF'] 4805 9223 ALELTGLK True NCI_RA007_Epitope_Rep5 843.5065686907499 843.50546993586 42.127 2 0.15547047482535786 0.0008658797794285193 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 3932 8181 AHDSSEYAI True PC9_epitope_Rep1 991.42468954159 991.42358993586 36.301 2 0.15546860271564264 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 129367 12308 VTEEFQPVY True H1975_Epitope_Rep2 1110.5233409536997 1110.52277496793 52.429 1 0.15546723204766055 0.0008658797794285193 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 115473 19568 TVFTDHMLTV True PC9_epitope_Rep2 1162.5692456002998 1162.5681499358602 80.65 2 0.15546673489768018 0.0008658797794285193 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 83178 22367 PYTPFLTEL True PC9_epitope_Rep2 1079.55391280599 1079.55280993586 91.525 2 0.1554634710365511 0.0008658797794285193 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 115586 23384 TVIDQIPFL True PC9_epitope_Rep1 1044.58554728744 1044.5844499358602 94.728 2 0.15545782377841333 0.0008658797794285193 0.9438714419765777 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 32113 6919 GEYISKDGVP True H1975_Epitope_Rep1 1063.51858992643 1063.51748993586 31.657 2 0.15545753514650443 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3', 'ABLIM3|p.Q205Pfs*5|1|0.33|ENSG00000173210|chr5:149210760-149210761|-/C|frameshift_variant'] 9447 5353 AVVTQVNKV True PC9_epitope_Rep6 956.5654805492 956.56438993586 28.446 2 0.15545523681909515 0.0008658797794285193 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 40801 21366 HVIDLDDATFL True PC9_epitope_Rep5 1257.62411762413 1257.6230299358601 87.243 2 0.1554552124835632 0.0008658797794285193 0.9438714419765777 ['ENSG00000152219|ENST00000282032|ARL14EP'] 103677 15356 SRDPVQLNL True PC9_epitope_Rep3 1040.56145779792 1040.56036993586 64.223 2 0.15545484501120463 0.0008658797794285193 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 34974 12537 GQYSHLVLL True NCI_RA007_Epitope_Rep4 1028.5654805491997 1028.5643899358602 55.239 2 0.15544492466531043 0.0008658797794285193 0.9438714419765777 ['ENSG00000080608|ENST00000397885|PUM3'] 98014 10680 SHSSLVSSI True PC9_epitope_Rep5 915.46616043075 915.46506993586 46.069 2 0.15544482962914324 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 98258 7370 SIFDGRVVAK True NCI_RA007_Epitope_Rep3 1090.61349337078 1090.6123899358602 36.117 2 0.15542721510150861 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 97892 14275 SHLSDQLTL True PC9_epitope_Rep2 1012.5189242796001 1012.51782993586 60.175 2 0.15542622333030343 0.0008658797794285193 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 138222 15799 YQTEIGQTL True PC9_epitope_Rep2 1051.51858992643 1051.51748993586 66.03 2 0.15542455915424644 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 47645 12830 IYPPKLHQF True PC9_epitope_Rep1 1141.62841515893 1141.62676490379 54.225 3 0.15541888505737272 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 97918 18368 SHNPLANIL True PC9_epitope_Rep2 977.52942939365 977.52832993586 75.983 2 0.15541773910558315 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 31726 10604 GEISALTAEA True NCI_RA007_Epitope_Rep3 960.47639076128 960.47584496793 48.761 1 0.15541647262623287 0.0008658797794285193 0.9438714419765777 ['ENSG00000125968|ENST00000376112|ID1'] 7478 9620 ASDTNPDFY True H1975_Epitope_Rep2 1028.40870512428 1028.4081749679299 41.98 1 0.1554129370199133 0.0008658797794285193 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R'] 1326 7228 AEEAEILHSA True H1975_Epitope_Rep2 1068.5087535187201 1068.5076499358602 32.736 2 0.15541077725440486 0.0008658797794285193 0.9438714419765777 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 14653 13805 DVNAAIATIK True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 57.944 2 0.15540583063827337 0.0008658797794285193 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 70180 19831 LYLKALEGF True PC9_epitope_Rep4 1052.5906326678798 1052.5895299358601 84.409 2 0.1553983074066894 0.0008658797794285193 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 2808 6032 AEVEPTPEA True H1975_Epitope_Rep3 941.4341915961298 941.43308993586 28.217 2 0.15539081268815358 0.0008658797794285193 0.9438714419765777 ['ENSG00000186834|ENST00000332499|HEXIM1'] 128313 4235 VSDEEM[Oxidation]M[Oxidation]ELR True H1975_Epitope_Rep3 1269.5217041154099 1269.5206099358602 21.408 2 0.15538755232268575 0.0008658797794285193 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'ENST00000460190.1_1_13:46733728-46733797:-|nuORF', 'LCP1|p.L163Ffs*4|2|0.19|ENSG00000136167|chr13:46156442-46156442|G/-|frameshift_variant'] 9898 22629 AYPEYLITF True PC9_epitope_Rep2 1115.55391280599 1115.55280993586 92.538 2 0.15537565314998097 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 139821 5598 YVDGVEVH True NCI_RA007_Epitope_Rep3 916.42904664604 916.4279499358599 29.013 2 0.15537113721915755 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 128401 10393 VSDTVVEPY True NCI_RA007_Epitope_Rep1 1007.4811417885498 1007.48057496793 44.409 1 0.15536575334107913 0.0008658797794285193 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 96235 5034 SEEPETPAA True H1975_Epitope_Rep3 929.3978060874099 929.39670993586 24.484 2 0.15536006451569817 0.0008658797794285193 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 24152 18739 EYTAKIALL True PC9_epitope_Rep1 1020.5855472874399 1020.58444993586 76.869 2 0.15535515545431783 0.0008658797794285193 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 75796 11495 NRAQIQTVI True PC9_epitope_Rep3 1041.59309227937 1041.59198993586 49.217 2 0.15535436442537578 0.0008658797794285193 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 138336 7685 YRAQPSASL True PC9_epitope_Rep1 991.5086939490699 991.50758993586 34.383 2 0.15535352547213194 0.0008658797794285193 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 35726 10311 GTSSLFIYK True NCI_RA007_Epitope_Rep5 1014.53859709502 1014.53750993586 46.292 2 0.15534503660250532 0.0008658797794285193 0.9438714419765777 ['ENSG00000179941|ENST00000650064|BBS10'] 25606 10826 FETEFNTQP True H1975_Epitope_Rep3 1111.48220441771 1111.4816749679298 46.721 1 0.15533260314023853 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 109627 15686 THDITTISI True PC9_epitope_Rep1 999.52367530687 999.52256993586 65.158 2 0.15532816776207442 0.0008658797794285193 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 116378 7991 TVYSGEEKL True PC9_epitope_Rep2 1024.5076908895599 1024.5065899358601 36.1 2 0.15532800099316682 0.0008658797794285193 0.9438714419765777 ['ENSG00000166224|ENST00000373202|SGPL1'] 103435 7520 SRAAEKLYL True PC9_epitope_Rep2 1049.58694426977 1049.58584993586 34.293 2 0.15532770169654628 0.0008658797794285193 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 77605 19913 NYTLVSHLI True PC9_epitope_Rep3 1058.5760452329 1058.57494993586 81.836 2 0.15532731118106385 0.0008658797794285193 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 45144 9420 IRAPSGTSL True PC9_epitope_Rep1 900.50288029264 900.50178993586 41.093 2 0.1553172393846959 0.0008658797794285193 0.9438714419765777 ['ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4'] 75471 16768 NQIKEFIYA True PC9_epitope_Rep3 1124.5866099165999 1124.58550993586 69.644 2 0.15531609644059596 0.0008658797794285193 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 139394 7179 YTEEDAASY True H1975_Epitope_Rep2 1047.40328539067 1047.4021899358602 32.548 2 0.1553118298836836 0.0008658797794285193 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 126836 5074 VPSYPSKSA True PC9_epitope_Rep5 934.47599683846 934.47488993586 24.542 2 0.15530717053600934 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 21239 13657 ERGPVLQL True PC9_epitope_Rep2 910.5236157372199 910.52250993586 57.824 2 0.15530533592021917 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000076706|P43121-2|MCAM', 'ENST00000528533.5_1_11:119181936-119187838:-|nuORF', 'ENSG00000076706|ENST00000264036|MCAM'] 75721 7493 NQWDGTQHGV True PC9_epitope_Rep2 1140.49483479008 1140.49372993586 34.193 2 0.15529897208008886 0.0008658797794285193 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 129258 10241 VTDPSTLEQY True H1975_Epitope_Rep2 1151.53463391339 1151.53352993586 44.397 2 0.1552902986408283 0.0008658797794285193 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 27687 19024 FQDGDTIVNV True PC9_epitope_Rep1 1106.52440358286 1106.5233099358602 77.966 2 0.1552892363704975 0.0008658797794285193 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 137061 6505 YLAEVAAGDDK True H1975_Epitope_Rep3 1150.5506183306998 1150.5495299358602 29.991 2 0.1552872971599244 0.0008658797794285193 0.9438714419765777 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF'] 9959 7977 AYRQGHFTY True PC9_epitope_Rep5 1141.53049202281 1141.52938993586 35.623 2 0.1552861454488238 0.0008658797794285193 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 108996 9647 TEVLKTHGLLV True NCI_RA007_Epitope_Rep4 1208.71287305888 1208.71123490379 43.959 3 0.15528503661097523 0.0008658797794285193 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A'] 11636 12093 DHASIQMNV True PC9_epitope_Rep3 1013.46002950449 1013.4589299358599 51.557 2 0.15528262028227668 0.0008658797794285193 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 140646 20096 YYPEHFTLL True PC9_epitope_Rep2 1181.57571087973 1181.57460993586 82.707 2 0.1552824381711585 0.0008658797794285193 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10'] 47913 22644 IYVPVSLGF True PC9_epitope_Rep2 993.55351888317 993.55242993586 92.594 2 0.1552694116961006 0.0008658797794285193 0.9438714419765777 ['ENSG00000172818|ENST00000335987|OVOL1'] 40238 15323 HRIFEPNCL True PC9_epitope_Rep1 1127.5545985956699 1127.5535099358601 63.759 2 0.1552677828919571 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF'] 72517 18157 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep5 989.5467196310099 989.54562993586 76.647 2 0.15526532412047409 0.0008658797794285193 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 12638 9274 DLEGLSQR True PC9_epitope_Rep1 916.46140940348 916.46030993586 40.525 2 0.15525935294566423 0.0008658797794285193 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 108371 9085 TEDPNQLTV True H1975_Epitope_Rep3 1015.4822044177099 1015.48110993586 39.933 2 0.15525278033796933 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2', 'NFE2L2|p.S270L|1|0.31|ENSG00000116044|chr2:177231794-177231794|G/A|missense_variant'] 123470 7253 VIFTGGVGK True NCI_RA007_Epitope_Rep5 876.5069030439198 876.50580993586 34.576 2 0.15524640600091075 0.0008658797794285193 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 21701 9525 ERYKEVAEL True PC9_epitope_Rep3 1135.5873381925899 1135.58624993586 41.585 2 0.1552251888863108 0.0008658797794285193 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 125003 6673 VLNTNIDGR True PC9_epitope_Rep4 1000.53015766964 1000.52906993586 32.843 2 0.15522210677438006 0.0008658797794285193 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 76928 9822 NVNEFPVLK True H1975_Epitope_Rep1 1058.5760452328998 1058.57494993586 42.708 2 0.15522083076451657 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 74213 12049 NIDPITM[Oxidation]AY True H1975_Epitope_Rep1 1052.48484765044 1052.4842749679299 51.357 1 0.15521066354111196 0.0008658797794285193 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 88452 15597 QYVDFHNQL True PC9_epitope_Rep1 1162.54072235334 1162.5396299358601 64.814 2 0.15520731585824848 0.0008658797794285193 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5', 'nc|ENSG00000134899|P28715-2|ERCC5'] 152 10899 AADPSVVNL True H1975_Epitope_Rep2 884.46034677432 884.4597949679301 46.953 1 0.15520730653134135 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 95160 11691 SAAFPGASL True NCI_RA007_Epitope_Rep3 819.41266830591 819.41211496793 53.101 1 0.15519640956723768 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 105811 22492 SVINFLDQL True PC9_epitope_Rep4 1047.5600608155898 1047.5589699358602 94.746 2 0.15519060389534692 0.0008658797794285193 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 9643 17734 AYGHFSYEF True PC9_epitope_Rep2 1119.46616043075 1119.4650699358601 73.495 2 0.1551874115150995 0.0008658797794285193 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 102535 11869 SQAEKVYIM True PC9_epitope_Rep5 1067.5321318155898 1067.53102993586 50.653 2 0.15518713338764184 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000515766.1_1_4:1332171-1332954:+|nuORF'] 68699 13439 LVDDPLEY True H1975_Epitope_Rep1 962.4596780679799 962.45912496793 56.807 1 0.15518685609531988 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 33868 23520 GLVPFLVSV True PC9_epitope_Rep5 929.5586042636099 929.55750993586 95.454 2 0.1551788215296523 0.0008658797794285193 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 87074 14319 QSEIASMLY True H1975_Epitope_Rep2 1040.48484727 1040.48374993586 60.227 2 0.155174815830819 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 97400 6937 SGEVLVNVK True NCI_RA007_Epitope_Rep1 943.53384606775 943.53274993586 30.987 2 0.15517254648678255 0.0008658797794285193 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 38572 20882 HHFLELVTL True PC9_epitope_Rep5 1107.60767971435 1107.60658993586 85.375 2 0.15517236417874938 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 113623 15554 TRDAGYGGLSL True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 64.977 2 0.15516969372810657 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 11897 7775 DHQREITSL True PC9_epitope_Rep1 1097.54653600977 1097.54542993586 34.728 2 0.15516711876859193 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'CLIP1|p.E1185Gfs*24|1|0.23|ENSG00000130779|chr12:122309804-122309805|-/T|frameshift_variant'] 114298 8245 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 38.393 2 0.15516641926203892 0.0008658797794285193 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 128894 9674 VSTEVDARL True PC9_epitope_Rep2 988.5189242795998 988.51782993586 42.549 2 0.15516338569617585 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 9747 12318 AYLEAHETF True PC9_epitope_Rep4 1079.4923751785898 1079.4912699358601 55.191 2 0.1551542454543004 0.0008658797794285193 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 48808 4598 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 22.791 2 0.1551507895771421 0.0008658797794285193 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 71372 9418 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep1 983.4269984211501 983.42590993586 41.139 2 0.15515010251444583 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 76473 14054 NTDFGDEFY True H1975_Epitope_Rep2 1106.4192698079798 1106.41816993586 59.211 2 0.15514926619577585 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 9907 19331 AYPEYLITY True PC9_epitope_Rep6 1131.54882742555 1131.5477299358602 87.005 2 0.15514620937774923 0.0008658797794285193 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 44539 12221 IPAPPLSKV True PC9_epitope_Rep4 920.56950330048 920.56840993586 54.828 2 0.15513534120698522 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF'] 138962 4152 YSENVERTKY True H1975_Epitope_Rep3 1287.60953018915 1287.60787490379 21.091 3 0.15512901976793944 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.M758Sfs*26|1|0.14|ENSG00000170921|chr17:63355299-63355303|GACAT/-|frameshift_variant'] 70998 15059 MEQPLDLTHIV True H1975_Epitope_Rep3 1294.65912323386 1294.6580299358602 63.317 2 0.1551140547710758 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 103797 14225 SRGDFVVEY True PC9_epitope_Rep2 1070.50327421546 1070.5021699358601 59.984 2 0.15510925894785546 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 17734 19878 EHSTVITFL True PC9_epitope_Rep1 1045.54441075145 1045.5433099358602 81.28 2 0.1551040754440087 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 109360 9947 TGISDVFAK True NCI_RA007_Epitope_Rep5 936.4916469026 936.49054993586 44.902 2 0.15509837090536066 0.0008658797794285193 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 25242 6061 FEDDYTHSA True H1975_Epitope_Rep3 1083.41451878071 1083.4134299358602 28.324 2 0.15509738355751404 0.0008658797794285193 0.9438714419765777 ['ENSG00000162664|ENST00000340281|ZNF326', 'nc|ENSG00000162664|Q5BKZ1-2|ZNF326'] 27324 15402 FMDPASALY True H1975_Epitope_Rep3 1013.45281886573 1013.4522749679301 64.655 1 0.1550945744960413 0.0008658797794285193 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 3494 9899 AGLQFPVGR True NCI_RA007_Epitope_Rep5 943.5239500903898 943.52284993586 44.719 2 0.15509391505706313 0.0008658797794285193 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 138776 11143 YSDDNPYYNY True H1975_Epitope_Rep1 1312.48841199696 1312.4878749679299 47.83 1 0.1550906596391797 0.0008658797794285193 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 6327 5360 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 27.337 2 0.15508375026905127 0.0008658797794285193 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 126505 12165 VPNKFLVTA True PC9_epitope_Rep4 987.5753169569099 987.57420993586 54.609 2 0.15507793289305938 0.0008658797794285193 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 94355 16910 RYALQLQQI True PC9_epitope_Rep2 1131.64004247179 1131.6389499358602 70.287 2 0.15507184256750017 0.0008658797794285193 0.9438714419765777 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant'] 38024 8770 HEIKSELL True PC9_epitope_Rep4 967.5338460677499 967.53274993586 41.243 2 0.15506907721877644 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000123415|Q53HV7-2|SMUG1'] 14279 5697 DSYVGDEAQTK True H1975_Epitope_Rep3 1211.5306111621096 1211.52950993586 26.944 2 0.1550639803146816 0.0008658797794285193 0.9438714419765777 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 25284 8017 FEDVVNQSSPK True PC9_epitope_Rep2 1248.59863115228 1248.5975299358602 36.198 2 0.15506173026799672 0.0008658797794285193 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 26552 8799 FIVNTNVPR True H1975_Epitope_Rep1 1058.58727862294 1058.5861899358601 38.771 2 0.1550593132703025 0.0008658797794285193 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 26713 16266 FLDFHALPY True H1975_Epitope_Rep2 1121.5545815123298 1121.5534899358602 67.78 2 0.15505700222126514 0.0008658797794285193 0.9438714419765777 ['ENSG00000148334|ENST00000338961|PTGES2', 'ENST00000277462.9_1_9:130887138-130890631:-|nuORF', 'ENST00000474124.5_1_9:130886092-130889945:-|nuORF'] 43611 18821 IIIPEIQKV True PC9_epitope_Rep2 1051.66413196131 1051.66302993586 77.765 2 0.15505541180882704 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 7479 9590 ASDTNPDFY True H1975_Epitope_Rep3 1028.40870512428 1028.4081749679299 41.9 1 0.1550531427351043 0.0008658797794285193 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R'] 75983 9175 NRIANPDQL True PC9_epitope_Rep5 1039.5410567065098 1039.53994993586 40.238 2 0.1550465383299533 0.0008658797794285193 0.9438714419765777 ['ENSG00000117528|ENST00000370214|ABCD3', 'nc|ENSG00000117528|P28288-3|ABCD3', 'nc|ENSG00000117528|P28288-2|ABCD3'] 2438 7469 AEQLTAPPSA True H1975_Epitope_Rep3 983.4923751785899 983.49182496793 33.708 1 0.15504457676111907 0.0008658797794285193 0.9438714419765777 ['ENSG00000075218|ENST00000454366|GTSE1', 'ENST00000466510.5_1_22:46711975-46722552:+|nuORF', 'ENST00000479645.1_1_22:46711975-46724816:+|nuORF'] 109786 5785 THISSQNSEL True PC9_epitope_Rep3 1114.52546621202 1114.52436993586 27.322 2 0.15504338233944237 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 139172 9882 YSSPYPQEY True H1975_Epitope_Rep2 1132.4713053808398 1132.4707749679299 42.999 1 0.15504193136325498 0.0008658797794285193 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76737066-76741701:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 88446 14418 QYTQALEKF True PC9_epitope_Rep3 1126.5658744720197 1126.56476993586 60.564 2 0.1550417656054529 0.0008658797794285193 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 84116 18037 QEQLLAILP True H1975_Epitope_Rep2 1023.5964463243098 1023.5953499358601 74.722 2 0.1550356728345809 0.0008658797794285193 0.9438714419765777 ['ENSG00000171222|ENST00000305978|SCAND1'] 17460 18378 EHGNFLITV True PC9_epitope_Rep2 1028.52909504048 1028.5279899358602 76.022 2 0.15503522475421655 0.0008658797794285193 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 9443 5665 AVVTQVNKV True PC9_epitope_Rep4 956.5654805492 956.56438993586 28.594 2 0.1550336889763084 0.0008658797794285193 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 22346 3725 ETEKM[Oxidation]IEKY True H1975_Epitope_Rep3 1185.5587408666897 1185.55708490379 19.395 3 0.1550311566653391 0.0008658797794285193 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 117241 15440 TYVYFTNEL True NCI_RA007_Epitope_Rep4 1148.5389910178399 1148.5378899358602 67.058 2 0.1550296418161822 0.0008658797794285193 0.9438714419765777 ['ENSG00000121858|ENST00000241261|TNFSF10', 'nc|ENSG00000121858|P50591-2|TNFSF10', 'ENST00000472804.1_1_3:172229350-172241222:-|nuORF', 'ENST00000494851.5_1_3:172226989-172241222:-|nuORF', 'ENST00000466777.1_1_3:172236192-172241222:-|nuORF'] 93629 10992 RTDYGQVFTY True H1975_Epitope_Rep1 1248.5775017848798 1248.57640993586 47.243 2 0.1550251595854232 0.0008658797794285193 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-2|MYO10'] 104482 8069 SSNIFTVAK True NCI_RA007_Epitope_Rep5 965.51819600361 965.51708993586 37.726 2 0.15502375340536662 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'ENST00000482818.1_1_22:29726183-29727937:-|nuORF'] 70812 11109 MEENFAVEA True H1975_Epitope_Rep2 1038.4328116971399 1038.43227496793 47.765 1 0.15502261009937993 0.0008658797794285193 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 114152 9110 TRSPVKVTL True PC9_epitope_Rep5 999.60767971435 999.60658993586 39.987 2 0.15502012285354286 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 3943 12662 AHDTTLVAL True PC9_epitope_Rep4 939.50254593947 939.50144993586 56.547 2 0.15501997895149688 0.0008658797794285193 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 46819 14298 IVDSLTEMY True H1975_Epitope_Rep2 1069.5001629809701 1069.49957496793 60.148 1 0.15501956857549062 0.0008658797794285193 0.9438714419765777 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant'] 9419 21785 AVVPGLLEV True PC9_epitope_Rep1 895.5378688190299 895.53676993586 88.626 2 0.15501546981758332 0.0008658797794285193 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 17296 18453 EHDLLQAAL True PC9_epitope_Rep1 1008.5240096600398 1008.52290993586 75.771 2 0.1550116119260135 0.0008658797794285193 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 128342 13873 VSDMVEDLY True H1975_Epitope_Rep2 1069.4637774722498 1069.46268993586 58.507 2 0.15500156133169632 0.0008658797794285193 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 9624 10651 AYGFVARI True NCI_RA007_Epitope_Rep3 895.4915873329498 895.49048993586 48.943 2 0.15499502239347376 0.0008658797794285193 0.9438714419765777 ['ENSG00000110799|ENST00000261405|VWF', 'ENST00000321023.5_1_12:6204574-6232125:-|nuORF', 'nc|ENSG00000110799|P04275-2|VWF'] 9562 21304 AYANIISQF True PC9_epitope_Rep3 1025.5181960036098 1025.5170899358602 87.242 2 0.15499409223418847 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 46795 7834 IVDHNIADY True H1975_Epitope_Rep2 1058.50327421546 1058.5021699358601 35.082 2 0.15498473401099422 0.0008658797794285193 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 76006 10187 NRITDASAL True PC9_epitope_Rep1 959.5036085686299 959.50250993586 44.063 2 0.15498194120851516 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 105869 17442 SVKNGFLTI True PC9_epitope_Rep5 977.55458151233 977.55348993586 72.09 2 0.1549816249044264 0.0008658797794285193 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 19978 12740 EMEEKYYRF True PC9_epitope_Rep1 1293.5699738762899 1293.56833490379 53.88 3 0.15497932396353786 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 27288 23503 FLYPFPLAL True PC9_epitope_Rep4 1079.60555445603 1079.6044499358602 98.708 2 0.15497372518026092 0.0008658797794285193 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 96957 10265 SEVEVIHVP True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 44.535 2 0.15497244967403462 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 102616 20420 SQATDFGEALV True PC9_epitope_Rep1 1136.5349682665599 1136.5338699358601 83.358 2 0.15497242808129472 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 111043 15497 TLDPQTGLFY True H1975_Epitope_Rep3 1153.5655401188499 1153.5649749679299 65.025 1 0.15496687439302104 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 97728 18011 SHFSEEVLL True PC9_epitope_Rep1 1059.52367530687 1059.52256993586 74.072 2 0.1549660448342439 0.0008658797794285193 0.9438714419765777 ['ENSG00000110628|ENST00000649076|SLC22A18'] 30001 18821 FYGPQVNNI True PC9_epitope_Rep1 1050.51344497634 1050.5123499358601 77.182 2 0.15496314496657812 0.0008658797794285193 0.9438714419765777 ['ENSG00000106299|ENST00000223023|WASL'] 140558 21345 YYLNEIQSF True PC9_epitope_Rep3 1175.5498900547097 1175.54937496793 87.401 1 0.1549626401687743 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 23912 9816 EYNKSWQTF True NCI_RA007_Epitope_Rep4 1201.5403880001697 1201.53928993586 44.606 2 0.15495588857144596 0.0008658797794285193 0.9438714419765777 ['ENSG00000198440|ENST00000333201|ZNF583'] 135659 9095 YEFSQRLEA True NCI_RA007_Epitope_Rep3 1141.5403880001697 1141.53928993586 42.862 2 0.15495544569431122 0.0008658797794285193 0.9438714419765777 ['ENST00000517801.5_1_8:130863079-130874553:-|nuORF', 'ENST00000523288.5_1_8:130864395-130891707:-|nuORF', 'ENSG00000153310|ENST00000694912|CYRIB'] 62126 19771 LLPDLIQKV True PC9_epitope_Rep2 1037.6484818971699 1037.64738993586 81.436 2 0.15495484020967099 0.0008658797794285193 0.9438714419765777 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF'] 112574 11214 TPAPHSPWTA True PC9_epitope_Rep3 1063.50869394907 1063.50758993586 48.143 2 0.1549416752847902 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 90944 8001 RLFVGSIPK True NCI_RA007_Epitope_Rep1 1015.6178504752298 1015.61674993586 35.116 2 0.15493344485363203 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 77648 18131 NYYKVNWTF True PC9_epitope_Rep6 1233.5818588893296 1233.5807699358602 82.376 2 0.15493151297145755 0.0008658797794285193 0.9438714419765777 ['ENST00000518345.1_1_8:109254078-109254135:-|nuORF'] 113154 20110 TQDAVPLTL True PC9_epitope_Rep1 956.51786165044 956.51731496793 82.183 1 0.15492421406014056 0.0008658797794285193 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 17466 17668 EHGNFLITV True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 75.986 2 0.15491958213650503 0.0008658797794285193 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 63932 16456 LPWQGLKAA True PC9_epitope_Rep1 982.5600012459398 982.55890993586 68.123 2 0.15491847541864617 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 6821 8848 AQHSVELTL True NCI_RA007_Epitope_Rep3 996.52400966004 996.52290993586 41.895 2 0.15491792611245106 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENSG00000090989|ENST00000381295|EXOC1'] 17555 14861 EHISSLIKL True PC9_epitope_Rep2 1038.6073453611798 1038.6062499358602 62.426 2 0.15491786454170828 0.0008658797794285193 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'chr17:32474824-32479851|119|15.35|0.28|5.76|+|0|PSMD11,PSMD11|1'] 31157 11447 GDEELDSLIK True NCI_RA007_Epitope_Rep2 1117.5502839775297 1117.54918993586 49.117 2 0.15491666915050137 0.0008658797794285193 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 94472 13385 RYGLVTNEI True PC9_epitope_Rep4 1063.56620882519 1063.5651099358602 59.388 2 0.15491560997536166 0.0008658797794285193 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 31282 13897 GDSVIVVLR True PC9_epitope_Rep4 956.5654805492 956.56438993586 61.355 2 0.15491185907260854 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 9895 10574 AYNPVTHQL True PC9_epitope_Rep1 1041.52434401321 1041.5232499358601 45.563 2 0.1549104683804056 0.0008658797794285193 0.9438714419765777 ['ENST00000525625.1_1_11:125884983-125893371:-|nuORF', 'ENSG00000064309|ENST00000531738|CDON', 'nc|ENSG00000064309|Q4KMG0|CDON', 'CDON|p.Q260Rfs*40|1|0.19|ENSG00000064309|chr11:126017239-126017239|C/-|frameshift_variant'] 106108 2624 SVNGKVLSK True NCI_RA007_Epitope_Rep4 930.5498304850599 930.54872993586 14.716 2 0.15491005226283167 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 129966 12880 VTNSVFHEI True PC9_epitope_Rep4 1044.52400966004 1044.52290993586 57.419 2 0.1549075551281521 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000074416|Q99685-2|MGLL', 'nc|ENSG00000074416|Q99685|MGLL', 'ENSG00000074416|ENST00000265052|MGLL'] 14844 9423 DYFEEYGK True H1975_Epitope_Rep3 1049.4341915961297 1049.4330899358602 41.247 2 0.15490271214920676 0.0008658797794285193 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 9904 20475 AYPEYLITY True PC9_epitope_Rep4 1131.54882742555 1131.5477299358602 86.904 2 0.154899677020862 0.0008658797794285193 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 32951 5322 GISEETTTGVH True NCI_RA007_Epitope_Rep1 1129.52513185885 1129.5240299358602 24.779 2 0.15489877207511082 0.0008658797794285193 0.9438714419765777 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 89134 11729 REFSDFIQA True NCI_RA007_Epitope_Rep5 1111.52982331647 1111.5287299358602 51.77 2 0.15489515918155175 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1', 'nc|ENSG00000139697|A3KN83-4|SBNO1'] 48849 9870 KESDVGFIP True H1975_Epitope_Rep3 990.5022115862998 990.50110993586 42.993 2 0.15489279123422384 0.0008658797794285193 0.9438714419765777 ['ENSG00000112339|ENST00000367837|HBS1L', 'nc|ENSG00000112339|Q9Y450-4|HBS1L'] 139404 8933 YTEEDAVSY True H1975_Epitope_Rep2 1075.43458551895 1075.43348993586 39.32 2 0.15488311070675415 0.0008658797794285193 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 17041 5209 EGM[Oxidation]NIVEAM[Oxidation]ER True H1975_Epitope_Rep3 1309.5642376337298 1309.5631299358602 25.126 2 0.15487468165503127 0.0008658797794285193 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 98537 14074 SILPAIFQK True NCI_RA007_Epitope_Rep4 1015.6066170851899 1015.60552993586 61.419 2 0.1548655249409966 0.0008658797794285193 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 84079 6595 QEQEGGPAVP True H1975_Epitope_Rep2 1010.4668887067396 1010.46578993586 30.278 2 0.15484442935412543 0.0008658797794285193 0.9438714419765777 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 96777 11217 SEQVPLMSA True H1975_Epitope_Rep2 960.4586325221599 960.45752993586 48.187 2 0.1548433462746322 0.0008658797794285193 0.9438714419765777 ['ENST00000551200.5_1_12:102471044-102512308:-|nuORF', 'ENSG00000075188|ENST00000552283|NUP37'] 75855 10646 NRDLSTPGL True PC9_epitope_Rep3 971.5036085686299 971.50250993586 45.897 2 0.1548408483099303 0.0008658797794285193 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 109681 8531 THEEAVTAL True PC9_epitope_Rep5 969.4767251144499 969.47562993586 37.757 2 0.15483821037830542 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 118468 6945 [Acetylation]-VDREQLVQK True NCI_RA007_Epitope_Rep2 1155.62478664677 1155.62368993586 31.634 2 0.15483661646236765 0.0008658797794285193 0.9438714419765777 ['ENSG00000170027|ENST00000307630|YWHAG'] 74290 20159 NIIPRFVQV True PC9_epitope_Rep3 1084.6393141958001 1084.63820993586 82.796 2 0.15483602729425827 0.0008658797794285193 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C'] 41227 17003 IADSNYNWFY True H1975_Epitope_Rep3 1291.55095268387 1291.54984993586 70.996 2 0.15482894843556036 0.0008658797794285193 0.9438714419765777 ['ENSG00000171451|ENST00000310045|DSEL', 'DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 49479 10587 KIYEGQVEV True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 46.039 2 0.15482753446884265 0.0008658797794285193 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 32905 10112 GINVTDFTR True H1975_Epitope_Rep3 1021.51925863277 1021.51816993586 43.937 2 0.1548256203060765 0.0008658797794285193 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'MYH9|p.L377F|1|0.27|ENSG00000100345|chr22:36318305-36318305|G/A|missense_variant', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 94069 13215 RVVDELDNQM True PC9_epitope_Rep1 1217.57103650545 1217.56992993586 55.695 2 0.1548251115203722 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000085231|Q9Y3D8-2|AK6', 'ENSG00000085231|ENST00000380822|AK6'] 34946 8801 GQWKKGFVL True NCI_RA007_Epitope_Rep5 1061.6022004110898 1061.6011099358602 40.52 2 0.1548241038868469 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 22384 6730 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54372993586 30.801 2 0.15482392182687668 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 113522 9054 TQTAVITRI True PC9_epitope_Rep6 1001.5869442697699 1001.58584993586 44.883 2 0.15482342946649277 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 67173 9059 LTDFQKAVY True H1975_Epitope_Rep1 1083.5600608155898 1083.5589699358602 39.754 2 0.15482299131555574 0.0008658797794285193 0.9438714419765777 ['ENSG00000182150|ENST00000653738|ERCC6L2', 'nc|ENSG00000182150|Q5T890-2|ERCC6L2'] 43252 20419 IHDGFGFM[Oxidation]L True PC9_epitope_Rep5 1051.4797027003501 1051.47860993586 83.577 2 0.15481694143459682 0.0008658797794285193 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 138059 18861 YQDPVTLQL True PC9_epitope_Rep6 1075.55497543515 1075.5538699358601 85.198 2 0.15481681547296613 0.0008658797794285193 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 2424 7000 AEQLRGFNA True H1975_Epitope_Rep2 1004.5039429217999 1004.50284993586 31.849 2 0.15481624922403084 0.0008658797794285193 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 103609 16165 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.59957490379 67.32 3 0.154814321476242 0.0008658797794285193 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 132397 19256 VYNENLVHMI True PC9_epitope_Rep3 1230.60669373818 1230.60558993586 79.289 2 0.1548078724536758 0.0008658797794285193 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 116999 11371 TYQDIQNTI True NCI_RA007_Epitope_Rep1 1094.52440358286 1094.5233099358602 48.204 2 0.15480668616899473 0.0008658797794285193 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 106142 16826 SVPDPELIKTV True PC9_epitope_Rep2 1196.66525416012 1196.66414993586 69.969 2 0.1548047394206974 0.0008658797794285193 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 8077 13681 ATEFIMNEY True H1975_Epitope_Rep1 1116.47976188956 1116.47917496793 57.759 1 0.15480430717185953 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 19476 5666 ELQELNDR True NCI_RA007_Epitope_Rep2 1015.49343780775 1015.49234993586 26.653 2 0.15480344848703667 0.0008658797794285193 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'DES|p.N121K|1|0.5|ENSG00000175084|chr2:219418825-219418825|C/G|missense_variant', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 77600 17792 NYTDIKDYL True PC9_epitope_Rep6 1143.54480467427 1143.54370993586 81.071 2 0.15479727936483126 0.0008658797794285193 0.9438714419765777 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 37239 13205 GVVEVTHDL True PC9_epitope_Rep1 967.4974605590298 967.49636993586 55.656 2 0.15479542486351194 0.0008658797794285193 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 129196 9353 VTDHLGVVY True H1975_Epitope_Rep2 1001.51819600361 1001.51708993586 40.937 2 0.15479325907264505 0.0008658797794285193 0.9438714419765777 ['ENST00000473051.1_1_10:74095570-74096546:-|nuORF', 'ENSG00000148719|ENST00000444643|DNAJB12', 'nc|ENSG00000148719|Q9NXW2-2|DNAJB12'] 28704 19193 FSVDDVQTV True PC9_epitope_Rep1 1008.4763907612801 1008.47528993586 78.62 2 0.15478735716306505 0.0008658797794285193 0.9438714419765777 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 35524 15430 GTIDEIQKL True PC9_epitope_Rep1 1015.5549754351499 1015.55386993586 64.17 2 0.1547820853018437 0.0008658797794285193 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1'] 1484 12426 AEEMETVIP True H1975_Epitope_Rep2 1017.4688628526899 1017.46827496793 52.882 1 0.15477735064737283 0.0008658797794285193 0.9438714419765777 ['ENSG00000116288|ENST00000338639|PARK7', 'ENST00000497113.1_1_1:8022845-8031696:+|nuORF', 'ENST00000465354.5_1_1:8022845-8031070:+|nuORF', 'ENST00000460192.5_1_1:8022845-8029412:+|nuORF'] 61397 10885 LLENTAITIGR True NCI_RA007_Epitope_Rep1 1199.68738658703 1199.68628993586 46.332 2 0.15477517860151221 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000589149.5_3_19:12812449-12813652:-|nuORF', 'ENST00000587155.1_1_19:12812547-12813748:-|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2'] 28878 9830 FTDVIGHY True H1975_Epitope_Rep3 950.4497820906199 950.44868993586 42.839 2 0.15476114995538373 0.0008658797794285193 0.9438714419765777 ['ENSG00000090432|ENST00000264198|MUL1'] 88880 5935 REAFEAIKAA True NCI_RA007_Epitope_Rep5 1104.5927579261997 1104.5916699358602 29.514 2 0.1547588638405485 0.0008658797794285193 0.9438714419765777 ['ENSG00000173141|ENST00000309594|MRPL57'] 27747 11207 FQDRPVSSL True PC9_epitope_Rep5 1047.53490869691 1047.53380993586 48.096 2 0.15475661941792435 0.0008658797794285193 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 28730 20733 FSWEGAFQHV True PC9_epitope_Rep5 1206.54580773378 1206.54470993586 84.808 2 0.15475562878522411 0.0008658797794285193 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114938170-114938437:+|nuORF'] 139817 6488 YVDEEGNLVK True H1975_Epitope_Rep2 1164.5662683948397 1164.56516993586 29.872 2 0.15475392787367737 0.0008658797794285193 0.9438714419765777 ['ENST00000474787.1_1_9:139974466-139974655:+|nuORF', 'nc|ENSG00000197355|Q3KQV9-2|UAP1L1', 'ENSG00000197355|ENST00000409858|UAP1L1'] 104751 11024 STDLQDYTY True H1975_Epitope_Rep2 1104.46113461996 1104.4600299358601 47.433 2 0.15474905501003386 0.0008658797794285193 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 125599 12485 VMAPRTLLL True H1975_Epitope_Rep2 1012.6103225666399 1012.60922993586 53.115 2 0.15474674689622012 0.0008658797794285193 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF', 'HLA-A|p.A2P|1|0.42|ENSG00000206503|chr6:29942557-29942557|G/C|missense_variant', 'ENST00000463348.5_1_6:30227401-30227711:+|nuORF'] 89276 5753 RELEQRVSL True NCI_RA007_Epitope_Rep3 1128.62512068364 1128.6234749037899 29.609 3 0.15474487700313952 0.0008658797794285193 0.9438714419765777 ['TAOK1|p.G928Vfs*42|1|0.31|ENSG00000160551|chr17:29542799-29542801|GCC/TT|frameshift_variant', 'ENSG00000160551|ENST00000261716|TAOK1', 'TAOK1|p.R841Q|1|0.16|ENSG00000160551|chr17:29534278-29534278|G/A|missense_variant', 'nc|ENSG00000160551|Q7L7X3-3|TAOK1'] 53891 13975 KYIEGVSDF True PC9_epitope_Rep4 1056.51277627 1056.51166993586 61.66 2 0.15474216269182045 0.0008658797794285193 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 24322 7149 FADLSEAANR True H1975_Epitope_Rep1 1092.5199869087598 1092.5188899358602 32.522 2 0.1547389225054525 0.0008658797794285193 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 24368 7441 FAEGQGRAL True PC9_epitope_Rep1 947.4824792012298 947.48138993586 33.437 2 0.15473468478748467 0.0008658797794285193 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 104720 12018 STDHIPILY True H1975_Epitope_Rep1 1057.54441075145 1057.54387496793 51.235 1 0.1547288994043233 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 106114 12106 SVNGVFKEV True PC9_epitope_Rep2 977.5181960036099 977.51708993586 51.875 2 0.15472222654268303 0.0008658797794285193 0.9438714419765777 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF', 'ENST00000533440.1_1_11:62562405-62563999:-|nuORF', 'ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'ENSG00000162231|ENST00000294172|NXF1'] 24269 22950 FAADIISVL True PC9_epitope_Rep5 947.53278343859 947.5322349679301 93.265 1 0.15471848760234305 0.0008658797794285193 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 75866 13943 NRDNVGLVL True PC9_epitope_Rep2 998.5508931142199 998.54978993586 58.91 2 0.15471218982314186 0.0008658797794285193 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 8083 13661 ATEFIMNEY True H1975_Epitope_Rep3 1116.47976188956 1116.47917496793 57.838 1 0.15471180858557007 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 32652 9801 GHLEKAVVL True PC9_epitope_Rep1 964.5705659296399 964.56946993586 42.561 2 0.1547111259465109 0.0008658797794285193 0.9438714419765777 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'ENSG00000134107|ENST00000256495|BHLHE40', 'ENSG00000123095|ENST00000242728|BHLHE41'] 88196 23399 QYAPLLAVF True PC9_epitope_Rep1 1020.5644179200399 1020.56387496793 94.788 1 0.15471096111502525 0.0008658797794285193 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 29331 16869 FVDRGFYSV True PC9_epitope_Rep5 1088.52909504048 1088.5279899358602 69.897 2 0.15470919330385202 0.0008658797794285193 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 72140 21356 MRFLAATFL True PC9_epitope_Rep2 1068.57902243836 1068.57792993586 87.614 2 0.1547054653889892 0.0008658797794285193 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 17471 16664 EHGNFLITV True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 76.567 2 0.15470399758345152 0.0008658797794285193 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 90342 15758 RIIDVVYNA True PC9_epitope_Rep2 1061.58694426977 1061.58584993586 65.881 2 0.15470210745222426 0.0008658797794285193 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 137181 14365 YLDSIPPGQYM True H1975_Epitope_Rep2 1282.5903749677 1282.58926993586 60.405 2 0.15470153678278464 0.0008658797794285193 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 75671 16767 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53911496793 69.318 1 0.15469302536538285 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 8031 8118 ATDTASGTGLY True H1975_Epitope_Rep2 1055.4771190372699 1055.47657496793 36.175 1 0.15469254114341952 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574', 'ZNF574|p.Q224Sfs*144|1|0.3|ENSG00000105732|chr19:42079275-42079275|C/-|frameshift_variant'] 108678 11319 TELMPPPPP True H1975_Epitope_Rep2 977.4892043744499 977.4886549679301 48.587 1 0.15468781405562712 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000111880|O60942-2|RNGTT', 'ENSG00000111880|ENST00000369485|RNGTT'] 140492 20309 YYIFIPSKF True PC9_epitope_Rep4 1176.6219327961599 1176.62137496793 86.261 1 0.1546855004518599 0.0008658797794285193 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 45091 6462 IQRTPKIQVYS True H1975_Epitope_Rep3 1331.75613485319 1331.7544949037901 29.828 3 0.15468437853514125 0.0008658797794285193 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 107538 11097 TADHNLLLY True H1975_Epitope_Rep3 1058.53965972418 1058.53856993586 47.778 2 0.1546813788497328 0.0008658797794285193 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 138392 13366 YRDPNTIETL True PC9_epitope_Rep1 1220.60371653272 1220.60260993586 56.272 2 0.15467923965339228 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 29597 22299 FVLDEADEML True PC9_epitope_Rep5 1180.53219138524 1180.53108993586 90.78 2 0.15467771360644259 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENST00000448133.1_1_13:61211649-61211793:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 70514 18432 LYTEKFEEF True PC9_epitope_Rep3 1204.5652057656796 1204.5641099358602 76.102 2 0.15466625240688625 0.0008658797794285193 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 11942 14784 DHSPDSLPL True PC9_epitope_Rep3 979.46107505031 979.45996993586 62.002 2 0.15466359603009003 0.0008658797794285193 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 8196 4664 ATGSVFTGK True NCI_RA007_Epitope_Rep4 866.4497820906199 866.44868993586 24.363 2 0.15465699365156033 0.0008658797794285193 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH'] 76351 9259 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.46057496793 40.571 1 0.1546567807210227 0.0008658797794285193 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 21587 5667 ERSGVNSEL True PC9_epitope_Rep5 989.47778774361 989.47668993586 26.795 2 0.15464983522507159 0.0008658797794285193 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 83177 9893 PYTKVEESF True PC9_epitope_Rep6 1098.5233409536997 1098.5222499358601 48.554 2 0.15464688377607586 0.0008658797794285193 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 39525 19884 HPFDLGLYNEA True PC9_epitope_Rep3 1274.59315184902 1274.5920499358601 81.723 2 0.15464359706919437 0.0008658797794285193 0.9438714419765777 ['ENSG00000106399|ENST00000223129|RPA3'] 75768 6011 NRAPNTAEL True PC9_epitope_Rep3 984.4988575413599 984.49776993586 28.174 2 0.15464174651073614 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 89420 4274 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 21.557 3 0.15463968138286965 0.0008658797794285193 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 4438 11961 AIWGSESNY True H1975_Epitope_Rep2 1025.4454249861699 1025.4443299358602 51.087 2 0.15463848331039592 0.0008658797794285193 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 40106 8242 HRDGALTQL True PC9_epitope_Rep5 1009.53049202281 1009.52938993586 36.644 2 0.15463793908423953 0.0008658797794285193 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 114136 5135 TRSITNTTV True PC9_epitope_Rep4 991.52982331647 991.52872993586 26.416 2 0.15463771442555094 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 83323 14111 QALLDLHAL True NCI_RA007_Epitope_Rep5 992.5654805492001 992.56438993586 60.967 2 0.15463698354174044 0.0008658797794285193 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 10001 8761 AYSVEHNQL True PC9_epitope_Rep5 1059.49852318819 1059.49742993586 38.641 2 0.15463608671377688 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 1240 6813 AEDLNRLTA True H1975_Epitope_Rep2 1001.51417325233 1001.51306993586 31.125 2 0.15462692719938698 0.0008658797794285193 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000262816.11_1_19:19456115-19463084:+|nuORF', 'ENST00000589947.7_1_19:19459550-19465349:+|nuORF'] 29997 13476 FYGDKMNLF True NCI_RA007_Epitope_Rep3 1133.52156713189 1133.52046993586 60.297 2 0.15462588217452564 0.0008658797794285193 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6'] 104887 6884 STFDTQITK True NCI_RA007_Epitope_Rep2 1039.51858992643 1039.51748993586 31.394 2 0.15461564972893832 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 17319 17371 EHDPQYAVIL True PC9_epitope_Rep2 1183.5873381925899 1183.58624993586 72.075 2 0.1546102626760033 0.0008658797794285193 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 97978 17805 SHSDYLLTI True PC9_epitope_Rep4 1047.52367530687 1047.52256993586 76.52 2 0.15460753569131722 0.0008658797794285193 0.9438714419765777 ['ENSG00000120833|ENST00000551556|SOCS2'] 133340 14403 WEVVPEPVA True H1975_Epitope_Rep2 1024.5229470308798 1024.5223749679299 60.55 1 0.15459918415286394 0.0008658797794285193 0.9438714419765777 ['ENSG00000156136|ENST00000286648|DCK'] 91251 11737 RLTEEFQNV True PC9_epitope_Rep4 1134.56693710118 1134.5658499358601 52.907 2 0.15459774427220943 0.0008658797794285193 0.9438714419765777 ['ENST00000486040.1_1_7:2274759-2277695:-|nuORF', 'ENSG00000122687|ENST00000242257|MRM2', 'ENST00000467199.5_1_7:2274759-2281791:-|nuORF'] 31849 6051 GEPPKDYRIP True H1975_Epitope_Rep2 1170.6033226098998 1170.60166490379 28.252 3 0.1545963537732532 0.0008658797794285193 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 75419 14238 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.52857496793 62.672 1 0.15459222101484107 0.0008658797794285193 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 133332 7734 WESPSPPKP True H1975_Epitope_Rep2 1023.5025459394699 1023.50144993586 34.701 2 0.154589133123317 0.0008658797794285193 0.9438714419765777 ['ENST00000514882.5_1_5:10683562-10761180:-|nuORF', 'ENSG00000112977|ENST00000230895|DAP'] 103009 21248 SQITSLVTL True PC9_epitope_Rep1 960.54916177872 960.54806993586 86.553 2 0.15457892639681614 0.0008658797794285193 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 84590 7587 QHDPETSVL True PC9_epitope_Rep4 1024.48253877088 1024.4814499358602 36.563 2 0.15457822474255933 0.0008658797794285193 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 40061 17720 HQYDGLVEL True PC9_epitope_Rep5 1072.5189242795998 1072.5178299358602 73.176 2 0.1545771477344012 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 136525 16587 YHQDAFMQL True PC9_epitope_Rep4 1151.5069796969099 1151.50588993586 71.778 2 0.15457610670064661 0.0008658797794285193 0.9438714419765777 ['ENSG00000170852|ENST00000304056|KBTBD2'] 95144 7308 SAAAALVLK True NCI_RA007_Epitope_Rep5 842.52255310806 842.52144993586 34.787 2 0.15457506616579983 0.0008658797794285193 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 108613 5293 TEINSQRIAA True H1975_Epitope_Rep3 1101.5778361380499 1101.5767299358602 25.439 2 0.15457034813073076 0.0008658797794285193 0.9438714419765777 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 54143 17803 KYNANFVTF True PC9_epitope_Rep5 1102.54474510462 1102.54364993586 73.499 2 0.1545699370067172 0.0008658797794285193 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 1624 6405 AEFVEVTK True NCI_RA007_Epitope_Rep5 921.4807478657299 921.47964993586 31.309 2 0.15456390691930386 0.0008658797794285193 0.9438714419765777 ['CON__P02769'] 96702 4191 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 21.239 2 0.1545621975927874 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 138344 9187 YRAQPSVSL True PC9_epitope_Rep6 1019.5399940773499 1019.53888993586 45.467 2 0.1545548880615456 0.0008658797794285193 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 5944 7240 APIIAVTR True NCI_RA007_Epitope_Rep4 839.5228874612301 839.5217899358599 34.483 2 0.1545419262666453 0.0008658797794285193 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 127552 18108 VQVPVPVTV True PC9_epitope_Rep6 936.5644179200399 936.56332993586 82.289 2 0.15453328427940535 0.0008658797794285193 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 1398 14632 AEEFPNLAV True H1975_Epitope_Rep2 988.4865615221598 988.48601496793 61.44 1 0.15451864178548094 0.0008658797794285193 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 139274 4978 YTDHQNSSSYY True H1975_Epitope_Rep1 1363.5316737912701 1363.53056993586 24.223 2 0.15451595691948583 0.0008658797794285193 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 34604 9468 GQHPNIITL True NCI_RA007_Epitope_Rep3 991.5450794577899 991.5439899358599 44.343 2 0.15450937514049845 0.0008658797794285193 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'RPS6KA6|p.R473P|1|0.56|ENSG00000072133|chrX:84105824-84105824|C/G|missense_variant', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 138348 8377 YRATGDPTL True PC9_epitope_Rep5 992.4927095317598 992.49160993586 37.164 2 0.15450868901371098 0.0008658797794285193 0.9438714419765777 ['ENSG00000088298|ENST00000374492|EDEM2', 'nc|ENSG00000088298|Q9BV94-2|EDEM2'] 74032 14283 NHSDYNMVL True PC9_epitope_Rep3 1091.47059418819 1091.46948993586 60.027 2 0.15450535395535706 0.0008658797794285193 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 109898 5332 THNPTNATL True PC9_epitope_Rep3 967.47230844035 967.47120993586 25.586 2 0.1544966083239874 0.0008658797794285193 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 102596 17013 SQANRLFYL True PC9_epitope_Rep6 1110.5821932425 1110.58108993586 77.991 2 0.15449325734394917 0.0008658797794285193 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 89069 9523 REELSNVLAA True H1975_Epitope_Rep2 1100.5825871653199 1100.5814899358602 41.601 2 0.15449013666102815 0.0008658797794285193 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 52613 19719 KQDEPIDLF True PC9_epitope_Rep1 1103.5498900547097 1103.5487899358602 80.675 2 0.15448592800653638 0.0008658797794285193 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 94851 10923 RYMPQNPHII True PC9_epitope_Rep2 1267.6495616096697 1267.64846993586 47.337 2 0.15447354412881018 0.0008658797794285193 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 136646 5670 YIDQEELNK True H1975_Epitope_Rep1 1150.5506183307 1150.5495299358602 26.88 2 0.15446368279349165 0.0008658797794285193 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 11914 17989 DHSFSLEL True PC9_epitope_Rep6 946.4396113297399 946.43850993586 81.822 2 0.15446286825360334 0.0008658797794285193 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 139025 11897 YSHPGVVFL True H1975_Epitope_Rep3 1017.5283667644899 1017.52726993586 50.914 2 0.15445443577382512 0.0008658797794285193 0.9438714419765777 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 125604 16676 VMAPRTVLL True PC9_epitope_Rep3 998.5946725024999 998.59356993586 69.281 2 0.15444593911653481 0.0008658797794285193 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 43136 8976 IGPLGLSPK True NCI_RA007_Epitope_Rep5 880.5382031722 880.53710993586 41.184 2 0.1544410331173551 0.0008658797794285193 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12'] 99941 17260 SLIGHLQTL True PC9_epitope_Rep4 980.5654805492001 980.56438993586 74.397 2 0.1544270304892148 0.0008658797794285193 0.9438714419765777 ['ENSG00000138166|ENST00000369583|DUSP5'] 94432 16874 RYFKGPELL True PC9_epitope_Rep3 1121.6233297784897 1121.62222993586 70.063 2 0.1544262977452873 0.0008658797794285193 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'CSNK2A1|p.D205H|1|0.1|ENSG00000101266|chr20:492262-492262|C/G|missense_variant', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 8979 12117 AVHEDIVAV True PC9_epitope_Rep3 951.5025459394699 951.50144993586 51.651 2 0.15442453108971932 0.0008658797794285193 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 132490 12504 VYPEKLATKF True PC9_epitope_Rep1 1194.6648602372995 1194.66322490379 52.965 3 0.1544241007994508 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 17358 5829 EHDTTEYKL True PC9_epitope_Rep2 1134.51931820242 1134.51766490379 27.816 3 0.15442105555457694 0.0008658797794285193 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 83103 21550 PYNPILGETF True PC9_epitope_Rep3 1149.57062549929 1149.5695299358601 88.187 2 0.15442064193173757 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 84889 21479 QHSIPVFIF True PC9_epitope_Rep1 1086.58621599378 1086.5851099358601 87.46 2 0.15441864674284614 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496255-118496735:-|nuORF'] 10100 17673 AYVPGFAHI True PC9_epitope_Rep2 973.5021520166499 973.50104993586 73.258 2 0.15441362347958862 0.0008658797794285193 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 70762 10376 MEDEVVRFA True H1975_Epitope_Rep2 1094.5066453437398 1094.50554993586 44.922 2 0.1544097664974395 0.0008658797794285193 0.9438714419765777 ['ENST00000521086.6_1_8:54915649-54934685:-|nuORF', 'nc|ENSG00000187735|P23193-2|TCEA1', 'ENSG00000187735|ENST00000521604|TCEA1'] 55049 23376 LALFPGVAL True PC9_epitope_Rep5 899.5480395799099 899.5474949679301 94.901 1 0.15440773608345093 0.0008658797794285193 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 76244 12617 NSDELQELY True H1975_Epitope_Rep2 1109.48768372097 1109.4865899358601 53.629 2 0.15440058430857123 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000160209|O00764-2|PDXK', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 44919 3026 IQEAGTEVVK True NCI_RA007_Epitope_Rep1 1072.5764391557198 1072.57534993586 15.646 2 0.1543967152782544 0.0008658797794285193 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 11704 7406 DHFASVHSV True PC9_epitope_Rep5 997.46174375665 997.46064993586 33.442 2 0.15439622668855366 0.0008658797794285193 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 8593 6237 AVAEPLPSPR True NCI_RA007_Epitope_Rep3 1035.5712942056298 1035.57018993586 31.538 2 0.15439553658307698 0.0008658797794285193 0.9438714419765777 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 123359 18354 VIAEILRGV True PC9_epitope_Rep4 968.6018660579199 968.60076993586 78.665 2 0.1543943541998719 0.0008658797794285193 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 20896 14917 EQSRIITVL True PC9_epitope_Rep4 1057.6131590176099 1057.61206993586 65.319 2 0.15439128134127786 0.0008658797794285193 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 106965 15290 SYLEAFYKF True NCI_RA007_Epitope_Rep3 1166.5648118428599 1166.56370993586 67.695 2 0.1543891066965778 0.0008658797794285193 0.9438714419765777 ['ENSG00000147614|ENST00000285393|ATP6V0D2', 'ATP6V0D2|p.G245Afs*20|1|0.29|ENSG00000147614|chr8:86150205-86150205|G/-|frameshift_variant'] 86495 18286 QQYNSFVSL True PC9_epitope_Rep6 1084.5189242796 1084.5178299358602 82.98 2 0.15438814969261097 0.0008658797794285193 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 99960 22966 SLINVGLISV True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 93.138 2 0.1543819052514146 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 1013 8188 AEAEPPSEVV True H1975_Epitope_Rep1 1026.48695544498 1026.4858499358602 36.435 2 0.15437815733613464 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 40097 8113 HRDGALTQL True PC9_epitope_Rep1 1009.53049202281 1009.52938993586 36.033 2 0.15437644139472675 0.0008658797794285193 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 35075 16821 GRHGVFLEL True PC9_epitope_Rep5 1026.5610638750998 1026.5599699358602 69.712 2 0.1543700450353661 0.0008658797794285193 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 1447 7229 AEEIPSRIQA True H1975_Epitope_Rep1 1112.58258716532 1112.5814899358602 32.817 2 0.15436968663517425 0.0008658797794285193 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 8452 5296 ATSPVVYTR True NCI_RA007_Epitope_Rep4 992.52909504048 992.52798993586 26.923 2 0.15436937167813708 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 28176 18631 FRNIPGITL True PC9_epitope_Rep4 1029.5971150306498 1029.5960099358601 79.742 2 0.15436729060948096 0.0008658797794285193 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 133221 7916 WEDFKQNTP True H1975_Epitope_Rep1 1163.5247379360299 1163.52364993586 35.401 2 0.15436421058862668 0.0008658797794285193 0.9438714419765777 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 131898 4499 VYEGERPLTK True NCI_RA007_Epitope_Rep2 1190.6295373577398 1190.62789490379 22.131 3 0.15434715512066888 0.0008658797794285193 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 24366 17251 FAEGFVRAL True PC9_epitope_Rep6 1008.5392658013598 1008.53816993586 78.955 2 0.15434644251571378 0.0008658797794285193 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 105827 12612 SVIPQIQKV True PC9_epitope_Rep6 1010.6124307416198 1010.61132993586 59.971 2 0.15434006684592427 0.0008658797794285193 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 116844 19379 TYMKDLYQL True PC9_epitope_Rep3 1173.5739966275698 1173.57288993586 79.765 2 0.1543388883429659 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 140617 14960 YYNKVSTVF True PC9_epitope_Rep3 1119.5600608155898 1119.5589699358602 62.674 2 0.1543384233974248 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 28394 11825 FSDVDSPYY True H1975_Epitope_Rep2 1091.44475627983 1091.44364993586 50.561 2 0.1543355633167703 0.0008658797794285193 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 61206 16185 LLDPASFEY True H1975_Epitope_Rep2 1053.50187723313 1053.5007899358602 67.465 2 0.15433303445880425 0.0008658797794285193 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 7196 17101 ARDETEFYL True PC9_epitope_Rep5 1142.5244035828598 1142.5233099358602 70.801 2 0.15433261918663774 0.0008658797794285193 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 127066 18318 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 75.475 2 0.1543270262816757 0.0008658797794285193 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 7660 4220 ASNPATFQR True NCI_RA007_Epitope_Rep4 990.4882928576599 990.48718993586 22.544 2 0.1542972579633049 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000286140|P0CG12|DERPC'] 47322 19781 IYGSVWEKL True PC9_epitope_Rep1 1093.58079626017 1093.5796899358602 80.911 2 0.15429496258271103 0.0008658797794285193 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8', 'nc|ENSG00000156671|Q96LT4-2|SAMD8'] 98038 9977 [Acetylation]-SHTILLVQPTK True NCI_RA007_Epitope_Rep5 1277.7343370957499 1277.7332299358602 45.018 2 0.15429128089763647 0.0008658797794285193 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 123327 17999 VHTTTILYL True PC9_epitope_Rep2 1059.59644632431 1059.5953499358602 74.536 2 0.15429111876250773 0.0008658797794285193 0.9438714419765777 ['ENST00000476917.5_1_10:126100559-126100658:-|nuORF'] 136467 5253 YHGNTNPEL True PC9_epitope_Rep4 1043.46722305991 1043.4661299358602 26.905 2 0.15428212027130173 0.0008658797794285193 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 116210 8304 TVTSEVPFSK True NCI_RA007_Epitope_Rep2 1093.5655401188499 1093.56444993586 36.94 2 0.15427720813386595 0.0008658797794285193 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000453217.1_1_17:15987383-15987569:+|nuORF'] 87795 19289 QVIEELFKA True PC9_epitope_Rep2 1075.5913609438699 1075.59026993586 79.569 2 0.15427238176080404 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000137513|Q96I59-2|NARS2', 'ENSG00000137513|ENST00000281038|NARS2'] 105544 7632 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4494699358602 34.31 2 0.15426617445841537 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 138024 21392 YQDEVFGGF True PC9_epitope_Rep5 1060.4501760134397 1060.44906993586 87.346 2 0.15426304114925113 0.0008658797794285193 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 91663 19833 RPFTIPYLTA True PC9_epitope_Rep4 1177.64954452633 1177.64844993586 84.417 2 0.1542581129320696 0.0008658797794285193 0.9438714419765777 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8', 'nc|ENSG00000137413|Q7Z7C8-4|TAF8'] 70794 10187 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42717496793 44.187 1 0.15425707434877603 0.0008658797794285193 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 46161 12253 ITDAYLDQY True H1975_Epitope_Rep2 1100.50260550912 1100.50207496793 52.213 1 0.15425142584621832 0.0008658797794285193 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 27277 22011 FLYPFPLAL True H1975_Epitope_Rep3 1079.60555445603 1079.6044499358602 92.039 2 0.15424712824609707 0.0008658797794285193 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 94917 12981 RYPDRITLI True PC9_epitope_Rep6 1145.65569253593 1145.65458993586 61.505 2 0.15424593714703508 0.0008658797794285193 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 26685 11888 FLDDGHTFNY True H1975_Epitope_Rep1 1227.51965255559 1227.5185499358602 50.728 2 0.15423565743304066 0.0008658797794285193 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 1857 6304 AEIEPEAQA True H1975_Epitope_Rep2 956.445090633 956.44454496793 29.184 1 0.15422901699388453 0.0008658797794285193 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 17110 15098 EGSPIKVTL True PC9_epitope_Rep1 942.53859709502 942.53750993586 62.893 2 0.15422152563053182 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF'] 103608 14365 SRDKTIIMW True PC9_epitope_Rep2 1148.60121443492 1148.60010993586 60.517 2 0.1542181805074138 0.0008658797794285193 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 136526 18193 YHQDAFMQL True PC9_epitope_Rep5 1151.5069796969099 1151.50588993586 74.989 2 0.15420590090720515 0.0008658797794285193 0.9438714419765777 ['ENSG00000170852|ENST00000304056|KBTBD2'] 1881 9602 AEIISEIRA True H1975_Epitope_Rep2 1000.55530978832 1000.55420993586 41.909 2 0.1541981319883187 0.0008658797794285193 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 22370 6783 ETEREYFNRY True H1975_Epitope_Rep3 1405.6262428824498 1405.62514993586 31.045 2 0.15419802715642833 0.0008658797794285193 0.9438714419765777 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 10087 7364 AYVHM[Oxidation]VTHF True PC9_epitope_Rep4 1119.5171508382302 1119.51604993586 35.662 2 0.15419519681602822 0.0008658797794285193 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 132141 10154 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5281849037901 43.933 3 0.15419281746948396 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 76246 12539 NSDELQELY True H1975_Epitope_Rep3 1109.48768372097 1109.4865899358601 53.43 2 0.15418046307335156 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000160209|O00764-2|PDXK', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 47700 17890 IYPVDLGDKF True PC9_epitope_Rep6 1165.6019256275697 1165.60082993586 81.439 2 0.1541798590834116 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-3|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H'] 138173 13649 YQNQGIYQV True PC9_epitope_Rep4 1111.52982331647 1111.5287299358602 60.393 2 0.15417726088556405 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 38890 15720 HIIENIVAV True PC9_epitope_Rep6 1006.58113061334 1006.58002993586 72.689 2 0.15417652863173092 0.0008658797794285193 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 109892 5138 THNPTNATL True PC9_epitope_Rep1 967.47230844035 967.47120993586 24.615 2 0.15417266403464402 0.0008658797794285193 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 53073 7260 KSDHTDVLYY True H1975_Epitope_Rep2 1239.57716743171 1239.5755349037902 32.86 3 0.15417240523734785 0.0008658797794285193 0.9438714419765777 ['ENSG00000116668|ENST00000367500|SWT1'] 76509 10935 NTDLGNDLY True H1975_Epitope_Rep1 1023.4509042894299 1023.4503749679301 47.025 1 0.1541710590986311 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 76455 16353 NTATIFHEL True PC9_epitope_Rep2 1044.52400966004 1044.52290993586 68.146 2 0.1541656792881398 0.0008658797794285193 0.9438714419765777 ['ENSG00000183735|ENST00000331710|TBK1'] 126704 7368 VPRPPDTVST True PC9_epitope_Rep4 1067.56112344475 1067.56002993586 35.678 2 0.15416055983091867 0.0008658797794285193 0.9438714419765777 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 118906 5111 VEEPSNPEA True H1975_Epitope_Rep3 970.4243551884199 970.4238049679301 24.772 1 0.1541503535796934 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 17519 12692 EHINEGETAML True PC9_epitope_Rep3 1242.55505208814 1242.5539499358601 53.844 2 0.15414920565831597 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 94563 14507 RYIPTAAAF True PC9_epitope_Rep2 1008.5392658013599 1008.53816993586 61.073 2 0.1541487165195283 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 108228 4821 TEAGAGAVAAA True H1975_Epitope_Rep2 887.4348603024698 887.43431496793 23.635 1 0.1541407030941262 0.0008658797794285193 0.9438714419765777 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 17206 15843 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50652993586 66.093 2 0.15413509561463415 0.0008658797794285193 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 37778 10203 HAYIISSL True NCI_RA007_Epitope_Rep3 902.4861675993401 902.48506993586 47.216 2 0.15413077566015532 0.0008658797794285193 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 135639 14639 YEESEVISLP True H1975_Epitope_Rep2 1164.5550350048 1164.5539299358602 61.469 2 0.15412748381450464 0.0008658797794285193 0.9438714419765777 ['ENSG00000112996|ENST00000507110|MRPS30', 'MRPS30|p.V185Sfs*19|1|0.08|ENSG00000112996|chr5:44809514-44809515|-/A|frameshift_variant'] 6912 20677 AQLDPEALGNI True PC9_epitope_Rep1 1139.58225281215 1139.5811499358601 84.357 2 0.15412585567629608 0.0008658797794285193 0.9438714419765777 ['ENSG00000134690|ENST00000373055|CDCA8'] 72087 12615 M[Oxidation]RDPIRILV True PC9_epitope_Rep6 1127.64849936095 1127.64685490379 59.982 3 0.15411307296358734 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 108314 12759 TEDGDSFLHLA True H1975_Epitope_Rep2 1203.54078192299 1203.53968993586 54.181 2 0.15410840669001744 0.0008658797794285193 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555629.1_1_14:35872865-35873850:-|nuORF', 'NFKBIA|p.L131Wfs*33|1|0.1|ENSG00000100906|chr14:35403306-35403306|G/-|frameshift_variant', 'ENST00000557100.5_1_14:35871861-35873850:-|nuORF', 'ENST00000557459.1_1_14:35872311-35873850:-|nuORF'] 132756 11777 VYSPHVLNL True NCI_RA007_Epitope_Rep1 1040.5654805492 1040.5643899358602 49.788 2 0.15409681813832496 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 136121 20252 YGFPSPIFL True H1975_Epitope_Rep1 1039.5378688190299 1039.53727496793 84.247 1 0.1540961020052918 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 107117 19340 SYM[Oxidation]GHFDLL True PC9_epitope_Rep1 1097.48518200361 1097.48408993586 79.197 2 0.15409527231306533 0.0008658797794285193 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 2059 9963 AELGEAPVP True H1975_Epitope_Rep2 881.4494477374499 881.4488949679301 43.315 1 0.15407366170986994 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 138969 11661 YSESSQLLY True H1975_Epitope_Rep2 1088.50260550912 1088.5015099358602 49.926 2 0.15407297942664297 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 64592 10701 LREDSTVSL True PC9_epitope_Rep5 1018.5294889633 1018.52838993586 46.151 2 0.15406908328037586 0.0008658797794285193 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4'] 5137 14857 ALNDKFASL True PC9_epitope_Rep2 977.51819600361 977.51708993586 62.411 2 0.15406613531316837 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'CON__Q0VBK2'] 73854 9694 NHFMQQTSV True PC9_epitope_Rep1 1090.4865786055 1090.4854899358602 42.144 2 0.15406379354214172 0.0008658797794285193 0.9438714419765777 ['ENSG00000196639|ENST00000431010|HRH1', 'HRH1|p.W165C|1|0.15|ENSG00000196639|chr3:11259532-11259532|G/T|missense_variant'] 48687 5668 KEMEKSFEV True H1975_Epitope_Rep2 1125.5376111188498 1125.53596490379 26.799 3 0.15406092275817643 0.0008658797794285193 0.9438714419765777 ['ENSG00000091527|ENST00000264993|CDV3'] 44893 13504 IQDEKYYQI True PC9_epitope_Rep5 1198.58700383942 1198.5859099358602 56.963 2 0.15405944372334887 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000147099|Q9BY41-4|HDAC8', 'ENSG00000147099|ENST00000373573|HDAC8', 'nc|ENSG00000147099|Q9BY41-6|HDAC8', 'nc|ENSG00000147099|Q9BY41-5|HDAC8'] 43773 22805 IIYPGAFVDL True PC9_epitope_Rep2 1106.60119735158 1106.60010993586 93.208 2 0.15405439143662147 0.0008658797794285193 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 91710 19894 RPGTAFELLEA True PC9_epitope_Rep5 1202.62953735774 1202.62844993586 81.574 2 0.15405269697911328 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 39009 8605 HKFEQVVAL True NCI_RA007_Epitope_Rep4 1069.59202965021 1069.59092993586 39.882 2 0.15405101863961002 0.0008658797794285193 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'ENST00000504524.5_1_3:129275157-129277480:-|nuORF', 'ENST00000512744.5_2_3:129275157-129278574:-|nuORF'] 31547 8262 GEFQEVVRA True NCI_RA007_Epitope_Rep4 1033.5192586327696 1033.5181699358602 38.588 2 0.15404972547333515 0.0008658797794285193 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000178685|ENST00000313028|PARP10', 'ENST00000526007.5_1_8:145051654-145057989:-|nuORF'] 36385 21476 GVIAEILRGV True PC9_epitope_Rep2 1025.6233297784897 1025.62222993586 88.079 2 0.15404923159837877 0.0008658797794285193 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 41036 11155 HYILHNSFF True NCI_RA007_Epitope_Rep5 1176.5716285587998 1176.5705299358601 49.543 2 0.1540488421338966 0.0008658797794285193 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 102213 7799 SPSPPFGHSA True PC9_epitope_Rep5 982.4508447197801 982.44974993586 34.942 2 0.15404789297051308 0.0008658797794285193 0.9438714419765777 ['ENSG00000141232|ENST00000499247|TOB1'] 113599 10199 TRAQIEDTL True PC9_epitope_Rep5 1045.54038800017 1045.53928993586 44.22 2 0.1540439587521956 0.0008658797794285193 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 53598 19537 KVVNIVPVI True PC9_epitope_Rep1 979.6430025939098 979.64190993586 79.972 2 0.15404360826144758 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 140413 20218 YYFDSYAHF True PC9_epitope_Rep2 1211.4923751785898 1211.4912699358601 83.186 2 0.1540406938824885 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF', 'PRMT8|p.E343Kfs*18|1|0.21|ENSG00000111218|chr12:3592277-3592277|G/-|frameshift_variant', 'ENST00000261252.4_1_12:3649876-3661973:+|nuORF', 'ENST00000543701.5_1_12:3600779-3659332:+|nuORF', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8'] 43287 14593 IHDNGEFYL True PC9_epitope_Rep6 1106.50327421546 1106.5021699358601 68.03 2 0.1540364181261775 0.0008658797794285193 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 138840 15806 YSDLNPEFSL True H1975_Epitope_Rep2 1183.5397192938299 1183.5386299358602 65.985 2 0.15403418616750622 0.0008658797794285193 0.9438714419765777 ['ENST00000437629.6_2_10:88856696-88911209:+|nuORF'] 13202 18058 DLTEYLSR True PC9_epitope_Rep3 995.49237517859 995.49126993586 74.659 2 0.1540271151526721 0.0008658797794285193 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 67224 11744 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48076993586 50.166 2 0.15402158096478855 0.0008658797794285193 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 25890 15319 FGIDRPAEL True PC9_epitope_Rep4 1016.5290950404799 1016.52798993586 66.857 2 0.15402089490111534 0.0008658797794285193 0.9438714419765777 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 108253 4293 TEAPLNPKA True H1975_Epitope_Rep2 939.5025459394699 939.50144993586 21.626 2 0.15401840338286693 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 786 9668 AAYYHPSYL True H1975_Epitope_Rep2 1083.5025459394699 1083.5014499358601 42.169 2 0.15401483849008143 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'GSE1|p.P829Lfs*26|1|0.21|ENSG00000131149|chr16:85663456-85663457|CC/T|frameshift_variant', 'GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 93864 5600 RVFTGVVTK True NCI_RA007_Epitope_Rep4 1005.5971150306499 1005.59600993586 28.139 2 0.15400526283450353 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 89641 8507 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.67550490379 37.676 3 0.15400118493662815 0.0008658797794285193 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 31677 14541 GEIENIELP True H1975_Epitope_Rep2 1012.5076908895599 1012.50717496793 61.089 1 0.1539923653941324 0.0008658797794285193 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 93613 11933 RTALNLFFK True NCI_RA007_Epitope_Rep4 1108.6393141958 1108.63820993586 52.9 2 0.15399230687541074 0.0008658797794285193 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 136563 18474 YHSFVSSVF True PC9_epitope_Rep4 1071.5025459394699 1071.5014499358601 79.131 2 0.15398821717532482 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 98534 13323 SILPAIFQK True NCI_RA007_Epitope_Rep3 1015.6066170851899 1015.60552993586 59.674 2 0.15398442955655828 0.0008658797794285193 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 74122 11549 NHVTPPNVSL True PC9_epitope_Rep4 1076.56145779792 1076.56036993586 52.185 2 0.1539829092171308 0.0008658797794285193 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 75490 19301 NQINGSFAL True PC9_epitope_Rep5 962.48214484806 962.48104993586 79.287 2 0.15397746422159625 0.0008658797794285193 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 64120 17840 LQEEPVEGF True PC9_epitope_Rep5 1046.49204082542 1046.49094993586 73.639 2 0.15396637020590512 0.0008658797794285193 0.9438714419765777 ['ENSG00000107341|ENST00000263228|UBE2R2', 'ENST00000586788.1_1_19:531880-536341:+|nuORF', 'ENSG00000099804|ENST00000215574|CDC34'] 28100 15552 FREDSTLAL True PC9_epitope_Rep1 1050.53457434374 1050.53346993586 64.644 2 0.15396484051853557 0.0008658797794285193 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671'] 104770 7131 STDPEALHY True H1975_Epitope_Rep2 1031.45598966987 1031.4548899358601 32.362 2 0.15396433648781996 0.0008658797794285193 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 21091 5188 ERDPGGITA True PC9_epitope_Rep3 914.4457593393399 914.44466993586 25.039 2 0.15396236250355178 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C', 'ENSG00000099385|ENST00000215115|BCL7C'] 95691 9813 SAYDGKDYIA True PC9_epitope_Rep2 1101.49785448185 1101.4967499358602 43.082 2 0.15396217818655156 0.0008658797794285193 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 76091 12043 NRMPDQISV True PC9_epitope_Rep5 1058.51787873378 1058.51678993586 51.317 2 0.15396182338178172 0.0008658797794285193 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant'] 739 10288 AAVPRAAFL True H1975_Epitope_Rep2 914.5337864980999 914.53268993586 44.579 2 0.15395634145755252 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 132776 21333 VYSQFITQL True PC9_epitope_Rep1 1097.5757108797297 1097.57517496793 86.888 1 0.15395197862058277 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 119971 6692 VEYSEEELK True NCI_RA007_Epitope_Rep2 1124.5237348765197 1124.52262993586 30.643 2 0.15393943187383358 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 1862 9793 AEIETELQA True H1975_Epitope_Rep2 1002.4869554449798 1002.48637496793 42.657 1 0.15393817131838125 0.0008658797794285193 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A'] 101845 6412 SPKAALRYAA True PC9_epitope_Rep3 1046.58727862294 1046.5861899358601 29.689 2 0.15393368811702698 0.0008658797794285193 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 7186 16446 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.52387496793 68.5 1 0.15392326224640443 0.0008658797794285193 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 21387 16693 ERMGYTITL True PC9_epitope_Rep4 1082.5430308524599 1082.54192993586 72.184 2 0.15392119838589172 0.0008658797794285193 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 106935 17898 SYKNGFLNL True PC9_epitope_Rep2 1054.54474510462 1054.54364993586 74.148 2 0.15391656788149563 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 3946 11860 AHDTTLVAL True PC9_epitope_Rep6 939.50254593947 939.50144993586 56.83 2 0.15391164064207086 0.0008658797794285193 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 61179 11454 LLDLPGGKY True H1975_Epitope_Rep2 974.54368247546 974.54258993586 49.112 2 0.153910961282803 0.0008658797794285193 0.9438714419765777 ['ENST00000557644.5_1_12:97330441-97330501:+|nuORF'] 13865 20734 DRDDFPVVL True PC9_epitope_Rep1 1074.53457434374 1074.53346993586 84.58 2 0.15390844353627164 0.0008658797794285193 0.9438714419765777 ['ENSG00000126458|ENST00000246792|RRAS'] 23808 15229 EYLERAPEL True PC9_epitope_Rep1 1118.5607890915799 1118.5596899358602 63.399 2 0.15390444114291202 0.0008658797794285193 0.9438714419765777 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 129382 9903 VTEFEDIKSGY True H1975_Epitope_Rep1 1286.6030478263797 1286.6019499358601 43.027 2 0.1538977757803506 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000437270.1_1_9:140535772-140535991:-|nuORF'] 70555 17405 LYVVDLKKF True PC9_epitope_Rep2 1123.6641319613097 1123.66249490379 72.207 3 0.1538913448886623 0.0008658797794285193 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 64590 10840 LREDSTVSL True PC9_epitope_Rep3 1018.5294889633 1018.52838993586 46.668 2 0.15388758047281112 0.0008658797794285193 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4'] 140577 17253 YYLSKIEEL True PC9_epitope_Rep6 1156.6015912743999 1156.6004899358602 78.963 2 0.15387248281191987 0.0008658797794285193 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5'] 138599 8326 YRQKQVVIL True PC9_epitope_Rep4 1145.6920780446499 1145.69044490379 39.484 3 0.15386557583093158 0.0008658797794285193 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 61692 16989 LLIDDKGTIKL True PC9_epitope_Rep4 1227.74383883399 1227.74218490379 73.339 3 0.153863796913503 0.0008658797794285193 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 107033 22898 SYLPFTEAF True PC9_epitope_Rep1 1073.5069626135698 1073.50637496793 92.875 1 0.15386234189465015 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 23762 10790 EYIRSLNQF True NCI_RA007_Epitope_Rep5 1168.58767254576 1168.58656993586 48.138 2 0.15385658858920997 0.0008658797794285193 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 71377 11165 MIDPSGVSY True H1975_Epitope_Rep1 967.4320834211501 967.43153496793 47.914 1 0.15385646065153788 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 117397 9354 VADGYPVRL True H1975_Epitope_Rep1 988.5341804209199 988.53308993586 40.888 2 0.15385219854157514 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 138104 12648 YQGVNLYVK True PC9_epitope_Rep2 1082.5760452328998 1082.57494993586 53.959 2 0.15385213287682115 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENST00000490798.5_1_20:43550276-43564067:+|nuORF', 'ENST00000476056.5_1_20:43550276-43561823:+|nuORF'] 2764 5946 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep3 863.3694835450299 863.36893496793 27.882 1 0.1538519496778371 0.0008658797794285193 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 44785 19888 IPTPIVGV True PC9_epitope_Rep1 794.49019035062 794.4896449679301 81.317 1 0.15385191330712897 0.0008658797794285193 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 71850 15551 MPFPNIRSA True PC9_epitope_Rep2 1031.5222358382298 1031.52112993586 65.09 2 0.15384535443956865 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'DDX11|p.E807Q|1|0.28|ENSG00000013573|chr12:31102982-31102982|G/C|missense_variant', 'ENST00000537136.1_1_12:31255149-31256026:+|nuORF', 'ENST00000435753.6_1_12:31250908-31256767:+|nuORF', 'ENST00000536265.5_1_12:31242773-31256767:+|nuORF'] 86527 9786 QRALPSEEL True PC9_epitope_Rep2 1041.54547338061 1041.54436993586 42.979 2 0.1538385235140414 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF', 'EIF4G1|p.G1434C|1|0.25|ENSG00000114867|chr3:184331511-184331511|G/T|missense_variant'] 76643 15429 NTIDRLIQA True PC9_epitope_Rep5 1042.57710786206 1042.5760099358602 64.357 2 0.15383694429745107 0.0008658797794285193 0.9438714419765777 ['ENST00000371727.5_1_1:51938565-51946964:-|nuORF'] 109921 14686 THQTIVVQL True PC9_epitope_Rep5 1037.58694426977 1037.58584993586 61.494 2 0.15383537277663203 0.0008658797794285193 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 45053 19125 IQPDNIVYV True PC9_epitope_Rep4 1059.56006081559 1059.5589699358602 81.657 2 0.15383221252176985 0.0008658797794285193 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 97934 10526 SHQGDYAVL True PC9_epitope_Rep1 988.4614094034798 988.46030993586 45.378 2 0.15383022223912454 0.0008658797794285193 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT'] 76217 8485 NRYDGIYKV True PC9_epitope_Rep4 1126.5771078620598 1126.5754649037901 40.111 3 0.15382295042644656 0.0008658797794285193 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 8348 16638 ATLSKIIQV True PC9_epitope_Rep3 971.6015317047498 971.60042993586 69.133 2 0.15381466559563042 0.0008658797794285193 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 95481 20505 SAMEVVPAL True PC9_epitope_Rep3 915.4735543103099 915.47244993586 84.133 2 0.15380595396767288 0.0008658797794285193 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 104220 9469 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.45377496793 41.391 1 0.15380435081590324 0.0008658797794285193 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 76887 17017 NVKEMWTEV True PC9_epitope_Rep1 1134.53794547202 1134.5368499358601 70.279 2 0.15379863443075423 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 96376 6939 SEGVTISYK True NCI_RA007_Epitope_Rep2 982.4971262058599 982.49602993586 31.612 2 0.1537740620482011 0.0008658797794285193 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 102575 16596 SQANIAQVL True PC9_epitope_Rep4 942.5134449763399 942.51234993586 71.812 2 0.1537709045620627 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 10028 16265 AYTPFHAVL True PC9_epitope_Rep6 1017.5283667644899 1017.52726993586 74.928 2 0.15376241722669245 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 99979 20030 SLIRNLEQL True PC9_epitope_Rep5 1084.62405805448 1084.62296993586 82.097 2 0.15376168274535815 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000601061.1_1_19:7710099-7712134:+|nuORF', 'ENST00000593854.5_1_19:7709481-7711320:+|nuORF'] 84413 14855 QGFQLTHSL True PC9_epitope_Rep2 1029.5243440132099 1029.5232499358601 62.404 2 0.15375631400013137 0.0008658797794285193 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000430210.1_1_1:227681388-227682478:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 14531 15646 DVANKIGII True PC9_epitope_Rep4 941.5545815123298 941.55348993586 68.11 2 0.15375280643403957 0.0008658797794285193 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 6677 7727 AQAPDLQRV True PC9_epitope_Rep4 996.5352430500799 996.53414993586 37.11 2 0.1537484052313698 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 72298 4493 M[Oxidation]SEEHTAVY True H1975_Epitope_Rep3 1081.43862573401 1081.43752993586 22.402 2 0.15374054133192364 0.0008658797794285193 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 87409 12949 QTDQMVFNAY True H1975_Epitope_Rep3 1215.52302368387 1215.5224749679298 55.04 1 0.15373796004669063 0.0008658797794285193 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 132900 12809 VYTTMAEHF True PC9_epitope_Rep4 1097.48518162317 1097.48408993586 57.13 2 0.15373250968600827 0.0008658797794285193 0.9438714419765777 ['ENSG00000117472|ENST00000372003|TSPAN1'] 6126 8611 APNLQNQQV True PC9_epitope_Rep4 1010.5145076055 1010.51340993586 40.603 2 0.1537304870175987 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 1851 9737 AEIEHFVDP True H1975_Epitope_Rep2 1055.49237517859 1055.4912699358601 42.439 2 0.1537262879318046 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 117436 15670 VADPYVVIM True NCI_RA007_Epitope_Rep5 1005.5205045027299 1005.51940993586 66.991 2 0.15372567178963548 0.0008658797794285193 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 139173 9793 YSSPYPQEY True H1975_Epitope_Rep3 1132.4713053808398 1132.47020993586 42.693 2 0.15372526319246294 0.0008658797794285193 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76737066-76741701:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 139392 7122 YTEEDAASY True H1975_Epitope_Rep2 1047.40328539067 1047.4027749679299 32.327 1 0.15372107961669987 0.0008658797794285193 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 94550 10614 RYIPTAAAF True NCI_RA007_Epitope_Rep2 1008.5392658013599 1008.53816993586 45.884 2 0.15371591321432151 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 86457 9017 QQSELQSQV True PC9_epitope_Rep1 1045.5040024914501 1045.50290993586 39.532 2 0.1537153770275952 0.0008658797794285193 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1', 'nc|ENSG00000078114|O76041-2|NEBL'] 88939 7286 REDENLQVP True H1975_Epitope_Rep2 1098.53055159246 1098.5294499358602 32.963 2 0.15371132071050592 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF'] 5381 7010 ALVAYYQK True NCI_RA007_Epitope_Rep5 954.5174677276201 954.51636993586 33.643 2 0.1537102672800368 0.0008658797794285193 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000339471.8_1_19:39923915-39924228:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 130888 14286 VVHDGFEGL True PC9_epitope_Rep3 971.47124581119 971.47014993586 60.039 2 0.15369939238095334 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 116654 19737 TYIPGTQITF True PC9_epitope_Rep6 1139.58627556343 1139.5851699358602 88.575 2 0.15369376956446942 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 9663 21618 AYGNVFSAF True PC9_epitope_Rep2 974.4497820906199 974.44923496793 88.628 1 0.1536904514446877 0.0008658797794285193 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 92375 8887 RQQITTVVL True NCI_RA007_Epitope_Rep3 1056.62914343492 1056.6280499358602 42.045 2 0.15368510513311295 0.0008658797794285193 0.9438714419765777 ['ENSG00000166002|ENST00000298966|SMCO4'] 116452 14273 TYADTLNHL True PC9_epitope_Rep2 1046.5032742154601 1046.5021699358601 60.167 2 0.15368189880714558 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.K1960N|1|0.26|ENSG00000151779|chr2:15238531-15238531|T/A|missense_variant'] 8732 10355 AVDPTSGQLY True H1975_Epitope_Rep2 1049.50293986229 1049.50184993586 44.839 2 0.15367929070682343 0.0008658797794285193 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 69546 5355 LVTEDVM[Oxidation]R True NCI_RA007_Epitope_Rep2 977.4851820036099 977.48408993586 25.449 2 0.15367595432371134 0.0008658797794285193 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 12611 7081 DLEAHIDSANK True PC9_epitope_Rep5 1211.57823006087 1211.57659490379 32.204 3 0.15366745497336665 0.0008658797794285193 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 136869 9350 YIYDGELVSK True NCI_RA007_Epitope_Rep3 1185.5917548666896 1185.59064993586 43.87 2 0.1536666393365821 0.0008658797794285193 0.9438714419765777 ['ENSG00000117620|ENST00000533028|SLC35A3', 'nc|ENSG00000283761|Q9Y2D2-2|SLC35A3'] 81792 11443 PSEYDTPLY True H1975_Epitope_Rep1 1083.47605640811 1083.47547496793 48.995 1 0.1536634387749158 0.0008658797794285193 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3', 'SETD3|p.Y313Lfs*18|1|0.19|ENSG00000183576|chr14:99405358-99405359|-/A|frameshift_variant'] 114035 10484 TRMSTVSEL True PC9_epitope_Rep3 1022.5066453437399 1022.5055499358599 45.264 2 0.15365750836619027 0.0008658797794285193 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 132179 8262 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5287299358602 41.378 2 0.1536548009699757 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 105480 9019 SVATGFSRV True PC9_epitope_Rep2 922.4872302284999 922.48612993586 40.041 2 0.15365166459160234 0.0008658797794285193 0.9438714419765777 ['ENST00000248923.8_1_22:25006313-25006394:+|nuORF', 'ENST00000411974.5_3_22:25003943-25006394:+|nuORF', 'ENST00000447416.5_3_22:25003608-25006394:+|nuORF', 'ENST00000438643.6_1_22:24999197-25006394:+|nuORF', 'ENST00000432867.5_1_22:25003608-25006394:+|nuORF'] 94524 18900 RYIDRIHIFF True PC9_epitope_Rep4 1378.7509899031 1378.74934490379 80.786 3 0.15364634949303002 0.0008658797794285193 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 138017 21167 YQDEVFGGF True PC9_epitope_Rep2 1060.4501760134397 1060.44906993586 86.874 2 0.15364168487799543 0.0008658797794285193 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 135204 9035 YAVGGYTRL True H1975_Epitope_Rep2 998.5185303567799 998.51742993586 39.705 2 0.1536371691674033 0.0008658797794285193 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 94833 20018 RYLTVATVF True PC9_epitope_Rep5 1068.59678067748 1068.59568993586 82.051 2 0.15363640609932885 0.0008658797794285193 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 75971 10562 NRHEGVFKF True PC9_epitope_Rep1 1132.5777765684 1132.57612490379 45.518 3 0.1536335765459804 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000475698.1_1_1:201982922-201984448:+|nuORF'] 114276 8753 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.58478993586 38.049 2 0.15363230228213434 0.0008658797794285193 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 56940 6535 LEDSVIRQA True H1975_Epitope_Rep2 1029.5454733806098 1029.54436993586 30.048 2 0.15363156197027503 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000174227|Q5H8A4-4|PIGG', 'nc|ENSG00000174227|Q5H8A4-2|PIGG', 'ENSG00000174227|ENST00000453061|PIGG', 'nc|ENSG00000174227|Q5H8A4-5|PIGG', 'nc|ENSG00000174227|Q5H8A4-6|PIGG'] 139971 22069 YVITDLTQL True PC9_epitope_Rep1 1064.57537652656 1064.57426993586 89.698 2 0.15363130004853062 0.0008658797794285193 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 75826 13968 NRDGNIVFV True PC9_epitope_Rep2 1032.5352430500798 1032.5341499358601 59.002 2 0.15362695614908498 0.0008658797794285193 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'NCOA3|p.K620Nfs*18|1|0.15|ENSG00000124151|chr20:47636241-47636241|A/-|frameshift_variant', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 72359 9105 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 39.975 2 0.15362062466685042 0.0008658797794285193 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 74204 17224 NIANHFFTV True PC9_epitope_Rep6 1061.52942939365 1061.52832993586 78.846 2 0.15362007537045028 0.0008658797794285193 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 112832 5090 TPMGPGRTV True PC9_epitope_Rep4 914.46438660894 914.46328993586 26.23 2 0.15361043447830575 0.0008658797794285193 0.9438714419765777 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 127372 20083 VQPSLFYHL True PC9_epitope_Rep5 1102.58113061334 1102.58002993586 82.299 2 0.15360562845005465 0.0008658797794285193 0.9438714419765777 ['MAP3K6|p.D642*|1|0.14|ENSG00000142733|chr1:27360835-27360836|-/A|frameshift_variant', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'ENSG00000142733|ENST00000357582|MAP3K6'] 104235 11299 SSDNIMVQY True H1975_Epitope_Rep3 1055.45936079815 1055.45877496793 48.567 1 0.15360375500205345 0.0008658797794285193 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 49480 10679 KIYEGQVEV True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 46.39 2 0.15360139005403517 0.0008658797794285193 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 47367 15979 IYIAGHPAF True PC9_epitope_Rep1 987.51780208079 987.51670993586 66.272 2 0.15359638829329034 0.0008658797794285193 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 176 10708 AAEEGLREL True PC9_epitope_Rep5 986.5032742154599 986.50216993586 46.177 2 0.15359247087646127 0.0008658797794285193 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 96255 9098 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 39.984 1 0.15358939784600337 0.0008658797794285193 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 67507 16130 LTELPDWSY True H1975_Epitope_Rep2 1122.5233409537 1122.52277496793 67.256 1 0.15358919239115726 0.0008658797794285193 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 86958 8278 QRVDSPVTV True PC9_epitope_Rep4 999.5349086969098 999.53380993586 39.302 2 0.1535885785883596 0.0008658797794285193 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 137996 20863 YQAPDIDVQL True PC9_epitope_Rep5 1160.57135377528 1160.5702499358601 85.301 2 0.15358649539262562 0.0008658797794285193 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 8892 20371 AVGELLQEV True PC9_epitope_Rep2 956.51786165044 956.51676993586 83.78 2 0.15358626794346683 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 113881 10501 TRHPENWTL True PC9_epitope_Rep1 1152.56760580752 1152.56596490379 45.283 3 0.1535847299425009 0.0008658797794285193 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 90685 6872 RKLLQQIRL True NCI_RA007_Epitope_Rep3 1166.7611606639798 1166.75950490379 34.14 3 0.15358155267508797 0.0008658797794285193 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 1905 7981 AEILNGKEISA True H1975_Epitope_Rep3 1143.61355294043 1143.61244993586 35.669 2 0.15357363420174577 0.0008658797794285193 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 77019 17234 NVVDVFHAV True PC9_epitope_Rep6 998.51853035678 998.51742993586 78.889 2 0.15357171378276865 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 97370 9314 SGAPHAILL True H1975_Epitope_Rep3 877.5021520166499 877.50104993586 40.821 2 0.15356579316773977 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000482694.1_1_2:85577073-85578124:-|nuORF'] 28771 21674 FTDDQWLNV True PC9_epitope_Rep5 1136.51383889916 1136.51274993586 88.417 2 0.15356057625364145 0.0008658797794285193 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 39947 18309 HQPTTWVSF True PC9_epitope_Rep5 1101.52434401321 1101.5232499358601 75.44 2 0.15355403387189528 0.0008658797794285193 0.9438714419765777 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF'] 69057 17225 LVIIESDLER True PC9_epitope_Rep1 1185.66050313285 1185.6594099358601 71.074 2 0.15355081258042586 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENSG00000140416|ENST00000403994|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF', 'ENST00000558868.5_1_15:63340774-63353139:+|nuORF', 'nc|ENSG00000140416|P09493-5|TPM1', 'nc|ENSG00000140416|P09493-6|TPM1'] 68426 22914 LTTLELLEV True PC9_epitope_Rep1 1029.5957776179698 1029.59527496793 92.937 1 0.1535505917697604 0.0008658797794285193 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 83890 15541 QEIFEVNNLP True H1975_Epitope_Rep2 1201.59790287629 1201.5968099358602 64.934 2 0.15355028781033364 0.0008658797794285193 0.9438714419765777 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000554892.1_1_14:24028960-24029314:-|nuORF', 'ENST00000557391.1_1_14:24028960-24029655:-|nuORF'] 34460 14250 GQDEPLIHV True PC9_epitope_Rep1 1006.5083595958998 1006.50726993586 59.637 2 0.1535502583600308 0.0008658797794285193 0.9438714419765777 ['ENSG00000157778|ENST00000288607|PSMG3'] 31899 7536 GEQKFSSLP True H1975_Epitope_Rep3 991.4974605590298 991.49636993586 33.969 2 0.15354917317098563 0.0008658797794285193 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT'] 124331 8079 VLDQGKITEY True H1975_Epitope_Rep1 1164.60265390356 1164.60154993586 36.019 2 0.15354856825848065 0.0008658797794285193 0.9438714419765777 ['ENSG00000135776|ENST00000344517|ABCB10'] 39898 19517 HQLALISQL True PC9_epitope_Rep3 1021.59202965021 1021.59092993586 80.304 2 0.15354743031704055 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 70928 15250 MELITPISA True H1975_Epitope_Rep2 973.5154191222899 973.51432993586 63.817 2 0.15354720569040956 0.0008658797794285193 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 41068 15446 HYKPTPLYF True PC9_epitope_Rep5 1164.59678067748 1164.59568993586 64.422 2 0.15354677378506015 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 8719 18951 AVDLTLPKV True PC9_epitope_Rep5 954.57498260374 954.57388993586 77.918 2 0.153546239882232 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 14896 14930 DYKESFNTI True PC9_epitope_Rep2 1115.5135045459901 1115.5124099358602 62.689 2 0.15354604733152089 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 86322 20157 QQHSILLLL True PC9_epitope_Rep4 1063.6389798426299 1063.6378899358601 85.67 2 0.15354323149592394 0.0008658797794285193 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 1885 5134 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5965849037902 24.825 3 0.1535414313812641 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 138230 15101 YQTEIGQTL True PC9_epitope_Rep4 1051.51858992643 1051.51748993586 66.015 2 0.15353689151307287 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 42537 8555 IESDPVTPP True H1975_Epitope_Rep2 953.47057710485 953.47002496793 37.862 1 0.1535347059803052 0.0008658797794285193 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 11659 12929 DHDGNIVEL True PC9_epitope_Rep6 1010.46688870674 1010.46578993586 61.272 2 0.15353263736421416 0.0008658797794285193 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 75761 5958 NRAPNTAEL True PC9_epitope_Rep1 984.4988575413599 984.49776993586 27.732 2 0.15352949451385747 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 41584 8577 IDEPLEGSEDR True PC9_epitope_Rep2 1258.56772494682 1258.5666299358602 38.352 2 0.15352826512423912 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000447355.1_1_2:136956686-136956818:-|nuORF'] 7424 4560 ASAYSIAQK True NCI_RA007_Epitope_Rep4 937.4868958753299 937.48578993586 23.942 2 0.1535276248207081 0.0008658797794285193 0.9438714419765777 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-4|BPNT1', 'BPNT1|p.V12L|1|0.14|ENSG00000162813|chr1:220079813-220079813|C/A|missense_variant'] 22436 11985 ETFSYPESY True H1975_Epitope_Rep2 1121.4553209635299 1121.45477496793 51.181 1 0.15352170873622692 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000047634|Q9UN30-2|SCML1', 'nc|ENSG00000047634|Q9UN30-1|SCML1', 'ENSG00000047634|ENST00000380041|SCML1'] 134517 15622 WVDSDQLLY True H1975_Epitope_Rep1 1137.53423999057 1137.5331499358601 65.376 2 0.15349811853450726 0.0008658797794285193 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 48435 7059 KEEEAGGFIA True H1975_Epitope_Rep3 1049.5029398622898 1049.50184993586 32.117 2 0.15349745006177762 0.0008658797794285193 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 83255 8894 QADTTRLEL True NCI_RA007_Epitope_Rep1 1045.54038800017 1045.53928993586 38.597 2 0.15349131237327085 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 130418 11113 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.49037496793 49.621 1 0.15348419598211446 0.0008658797794285193 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 54081 15595 KYMDIEFDF True NCI_RA007_Epitope_Rep3 1206.5267120819797 1206.52560993586 68.927 2 0.15348273342751495 0.0008658797794285193 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000471904.1_1_2:192128111-192215016:+|nuORF', 'MYO1A|p.T562Dfs*32|1|0.09|ENSG00000166866|chr12:57038489-57038490|-/G|frameshift_variant', 'ENSG00000166866|ENST00000300119|MYO1A'] 25247 11835 FEDENFILK True H1975_Epitope_Rep1 1153.5655401188499 1153.56444993586 50.52 2 0.15348142778402488 0.0008658797794285193 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 103731 13502 SREPSQVIF True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 56.986 2 0.1534767031586703 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 8134 9533 ATETQPIVY True H1975_Epitope_Rep3 1020.5127762699997 1020.51227496793 41.676 1 0.15347362234357892 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 27911 19791 FQLRSFDQL True PC9_epitope_Rep2 1152.5927579261997 1152.5916699358602 81.515 2 0.15347053789852014 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 36564 17609 GVLDTLTKV True PC9_epitope_Rep6 944.55424715916 944.55314993586 80.373 2 0.15346564696269155 0.0008658797794285193 0.9438714419765777 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 21775 13136 ESDFSNPLY True H1975_Epitope_Rep1 1070.4556553167 1070.45454993586 55.62 2 0.15346015190483261 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 23860 19504 EYMAQHLVF True PC9_epitope_Rep5 1136.5324661687598 1136.53136993586 80.076 2 0.1534580684304609 0.0008658797794285193 0.9438714419765777 ['ENST00000473429.5_1_1:110591964-110592183:+|nuORF', 'nc|ENSG00000143093|Q5VSL9-3|STRIP1', 'ENST00000485775.5_1_1:110582506-110596531:+|nuORF', 'nc|ENSG00000143093|Q5VSL9-2|STRIP1', 'ENSG00000143093|ENST00000369795|STRIP1'] 94657 11274 RYLEKFYGL True NCI_RA007_Epitope_Rep4 1187.6338944621898 1187.63278993586 50.26 2 0.15345273270109633 0.0008658797794285193 0.9438714419765777 ['ENSG00000262406|ENST00000571244|MMP12'] 40 17237 AAAAVIPTV True PC9_epitope_Rep5 811.48035394291 811.47924993586 71.32 2 0.153449937290575 0.0008658797794285193 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 12136 7991 DIIPNPQER True H1975_Epitope_Rep1 1080.5563724174801 1080.55526993586 35.688 2 0.1534496624529024 0.0008658797794285193 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 103662 12641 SRDPIVMGV True PC9_epitope_Rep4 972.50625142092 972.50514993586 56.464 2 0.15344434795296394 0.0008658797794285193 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 93599 4900 RSYHLQIVTK True NCI_RA007_Epitope_Rep5 1243.7037053575098 1243.70206490379 25.542 3 0.1534354670333097 0.0008658797794285193 0.9438714419765777 ['ENSG00000131203|ENST00000518237|IDO1'] 108399 9355 TEEAFNTQV True H1975_Epitope_Rep2 1037.4665543535698 1037.46544993586 40.945 2 0.15342772668026733 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 59865 16742 LHGNIITSL True PC9_epitope_Rep1 966.54983048506 966.54872993586 69.226 2 0.15342445506407815 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF', 'CEP97|p.V352Lfs*3|1|0.33|ENSG00000182504|chr3:101757658-101757658|G/-|frameshift_variant'] 114042 18057 TRNDIVNML True PC9_epitope_Rep3 1074.54917886206 1074.5480899358602 74.655 2 0.15342070264830523 0.0008658797794285193 0.9438714419765777 ['ENST00000465772.5_1_10:27793310-27827017:+|nuORF', 'ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18'] 36570 23252 GVLENIFGV True PC9_epitope_Rep2 946.5123823471798 946.51128993586 94.922 2 0.15341846764089603 0.0008658797794285193 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 27705 8422 FQDNHGVTV True PC9_epitope_Rep1 1015.4723084403499 1015.47120993586 37.231 2 0.15340346144928918 0.0008658797794285193 0.9438714419765777 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2'] 120107 11695 VFIDKQTNL True PC9_epitope_Rep4 1076.5866099166 1076.58550993586 52.747 2 0.15340206219453448 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 131499 19150 VVVDPIQSV True PC9_epitope_Rep1 954.53859709502 954.53750993586 78.454 2 0.15339858779984086 0.0008658797794285193 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 123094 17639 VHAPPMQLGF True PC9_epitope_Rep4 1095.5535359665098 1095.5524299358601 75.87 2 0.15339480707278338 0.0008658797794285193 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 113851 13634 TREGGSIPVTL True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 57.734 2 0.15339222337419978 0.0008658797794285193 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 48496 7809 KEFIKIVEA True NCI_RA007_Epitope_Rep3 1075.62774645259 1075.62664993586 37.837 2 0.1533864989517126 0.0008658797794285193 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 90191 18792 RHIEIFTDL True PC9_epitope_Rep1 1142.6084079903399 1142.60730993586 77.068 2 0.15338526208620912 0.0008658797794285193 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 52848 9994 KQYGNEVFL True NCI_RA007_Epitope_Rep4 1096.5553097883198 1096.5542099358602 45.287 2 0.1533807767116469 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 133023 13713 VYVQHPITF True PC9_epitope_Rep6 1102.5811306133398 1102.58002993586 64.536 2 0.1533797418311811 0.0008658797794285193 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 17797 16759 EHVPVVIGL True PC9_epitope_Rep6 961.5596668927699 961.55856993586 76.956 2 0.15336579361752778 0.0008658797794285193 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6', 'SOCS6|p.E434Gfs*2|1|0.26|ENSG00000170677|chr18:70325969-70325979|AGCACTCAAAT/-|frameshift_variant'] 75798 11274 NRAQIQTVI True PC9_epitope_Rep5 1041.59309227937 1041.59198993586 48.358 2 0.15336419054202394 0.0008658797794285193 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 82154 17008 PTDYADIMMGY True H1975_Epitope_Rep2 1275.51516142211 1275.51406993586 70.675 2 0.15336201910170041 0.0008658797794285193 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 105577 6064 SVEAAAELSAK True H1975_Epitope_Rep1 1074.55570371114 1074.55460993586 28.392 2 0.15336080290439885 0.0008658797794285193 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 47610 20384 IYPATIASI True PC9_epitope_Rep5 947.53278343859 947.53168993586 83.442 2 0.1533532211024415 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000205571|Q16637-4|SMN1', 'nc|ENSG00000205571|Q16637-2|SMN1', 'nc|ENSG00000205571|Q16637-3|SMN1', 'ENSG00000205571|ENST00000380743|SMN2', 'ENSG00000172062|ENST00000380707|SMN1'] 74676 23504 NLIDLDDLYV True PC9_epitope_Rep5 1191.6023195503901 1191.6012299358601 95.39 2 0.1533462301071607 0.0008658797794285193 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 138308 18079 YRAPELLL True PC9_epitope_Rep4 973.5596668927699 973.55856993586 77.603 2 0.15334598699004526 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'CDK19|p.G207V|2|0.16|ENSG00000155111|chr6:110632056-110632056|C/A|missense_variant', 'ENSG00000155111|ENST00000368911|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'CDK8|p.H300Qfs*3|1|0.14|ENSG00000132964|chr13:26397191-26397192|AT/-|frameshift_variant', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 74059 7859 NHSNQFTQL True PC9_epitope_Rep6 1087.50467119779 1087.50356993586 39.632 2 0.15334259302453276 0.0008658797794285193 0.9438714419765777 ['ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENSG00000132024|ENST00000318003|CC2D1A'] 53217 11932 KTDKTLVLL True PC9_epitope_Rep2 1029.6433965167298 1029.6422899358602 51.218 2 0.15334241267084325 0.0008658797794285193 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 124261 20366 VLDDKLVFV True PC9_epitope_Rep5 1046.60119735158 1046.60010993586 83.373 2 0.1533395557419403 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 38723 18724 HHSSVIFIF True PC9_epitope_Rep4 1085.56581490237 1085.56470993586 80.103 2 0.15333837199884756 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 138418 10944 YRDPYTGQSV True PC9_epitope_Rep2 1184.5462016566 1184.5451099358602 47.416 2 0.15333707829795304 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 105014 3376 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 18.812 3 0.15333611969925892 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 8044 10393 ATDWGDTQAY True H1975_Epitope_Rep2 1126.4567179458597 1126.4561749679299 44.988 1 0.15332931838262828 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 102916 16597 SQIHDIVLV True PC9_epitope_Rep2 1022.5760452328999 1022.57494993586 69.083 2 0.15331872148224468 0.0008658797794285193 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 11631 11955 DHASIQMNV True PC9_epitope_Rep1 1013.46002950449 1013.4589299358599 50.852 2 0.15331396949613255 0.0008658797794285193 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 8013 11520 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.4858499358602 49.369 2 0.15331109267737103 0.0008658797794285193 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 11564 14003 DGQFSVLFTK True NCI_RA007_Epitope_Rep1 1140.5815245361598 1140.5804299358601 58.495 2 0.15330948965982347 0.0008658797794285193 0.9438714419765777 ['CON__P12763'] 75821 19695 NRDEMLVVL True PC9_epitope_Rep3 1087.5695799534699 1087.56848993586 80.987 2 0.15330789404168385 0.0008658797794285193 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 87368 12740 QTDIQGALSAY True H1975_Epitope_Rep2 1165.5615173675699 1165.56097496793 54.108 1 0.15330288913691706 0.0008658797794285193 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 64988 9980 LSDFFKTHY True H1975_Epitope_Rep2 1156.55530978832 1156.5536549037902 43.378 3 0.15329685831820725 0.0008658797794285193 0.9438714419765777 ['ENSG00000149136|ENST00000278412|SSRP1', 'SSRP1|p.G212Vfs*45|1|0.14|ENSG00000149136|chr11:57332759-57332760|CA/T|frameshift_variant', 'ENST00000293880.9_1_11:57100225-57103093:-|nuORF'] 54196 17060 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 70.49 2 0.15329635997296373 0.0008658797794285193 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 109565 14792 THASQIELL True PC9_epitope_Rep3 1010.5396597241798 1010.53856993586 62.031 2 0.1532948299741731 0.0008658797794285193 0.9438714419765777 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 54601 8746 LADDSVRSL True PC9_epitope_Rep6 974.50327421546 974.50216993586 43.53 2 0.15328648851335258 0.0008658797794285193 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 89400 5018 REMPVKVEA True H1975_Epitope_Rep3 1057.5590152697698 1057.5579099358602 24.426 2 0.15328572771601626 0.0008658797794285193 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 103744 16370 SRFGKFVQL True PC9_epitope_Rep1 1080.60801406752 1080.6069099358601 67.788 2 0.15328550849627356 0.0008658797794285193 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant'] 35319 13487 GSVDGVIKEV True PC9_epitope_Rep5 1001.5393253710099 1001.53822993586 56.897 2 0.15328136457164387 0.0008658797794285193 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 132431 18534 VYNPVIYVF True NCI_RA007_Epitope_Rep4 1112.5906326678798 1112.5895299358601 80.202 2 0.15327592520068378 0.0008658797794285193 0.9438714419765777 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 14988 20510 DYTIGFGKF True PC9_epitope_Rep2 1046.50729696674 1046.5061899358602 84.322 2 0.15327548260489343 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 76400 8322 NSLPDTVQIR True H1975_Epitope_Rep1 1141.6091362663299 1141.60802993586 36.942 2 0.15326863858362758 0.0008658797794285193 0.9438714419765777 ['ENSG00000242372|ENST00000374450|EIF6'] 44109 6599 ILNDDTALK True H1975_Epitope_Rep3 1001.53932537101 1001.53822993586 30.337 2 0.15325702674152614 0.0008658797794285193 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B'] 4016 6338 AHIPKSDAL True PC9_epitope_Rep5 950.5185303567799 950.51742993586 29.353 2 0.15324941272913534 0.0008658797794285193 0.9438714419765777 ['NFE2L2-PDE11A|3|fusion', 'NFE2L2-PDE11A|1|fusion', 'NFE2L2-PDE11A|2|fusion', 'nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 130752 16770 VVDPNDPQML True PC9_epitope_Rep5 1126.53286009158 1126.5317699358602 69.51 2 0.15324758521053042 0.0008658797794285193 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 124209 19068 VLAPLPLHGV True PC9_epitope_Rep5 1014.6226015025001 1014.62150993586 78.374 2 0.1532467373054769 0.0008658797794285193 0.9438714419765777 ['RNF130|p.N172Tfs*6|1|0.34|ENSG00000113269|chr5:180013239-180013239|T/-|frameshift_variant', 'nc|ENSG00000113269|Q86XS8-2|RNF130', 'ENSG00000113269|ENST00000521389|RNF130'] 410 13381 AALNGLYRV True PC9_epitope_Rep4 975.55016483823 975.54906993586 59.373 2 0.15324500380549447 0.0008658797794285193 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 106158 15240 SVPDPELIKTV True PC9_epitope_Rep6 1196.66525416012 1196.66414993586 70.729 2 0.153243542081962 0.0008658797794285193 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 108448 10817 TEELAYLK True PC9_epitope_Rep4 965.50696261357 965.50586993586 49.367 2 0.15324152973512822 0.0008658797794285193 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 11661 11743 DHDIPQQL True PC9_epitope_Rep1 964.46140940348 964.46030993586 50.043 2 0.15323968649775263 0.0008658797794285193 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 103805 12685 SRGDFVVEY True PC9_epitope_Rep6 1070.50327421546 1070.5021699358601 60.268 2 0.1532313189280009 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 27099 20706 FLQEGDLISA True PC9_epitope_Rep1 1091.54989005471 1091.54937496793 84.472 1 0.15322706660480942 0.0008658797794285193 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 118379 19183 VDIVAINDPFI True H1975_Epitope_Rep3 1214.65468947642 1214.65358993586 80.438 2 0.1532224284085269 0.0008658797794285193 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF', 'ENST00000438477.2_1_1:120039232-120039448:-|nuORF', 'ENST00000423411.2_1_6:135941072-135941228:-|nuORF'] 64604 11599 LREGDPVSL True PC9_epitope_Rep2 984.52400966004 984.52290993586 49.942 2 0.15322178428519737 0.0008658797794285193 0.9438714419765777 ['ENSG00000141499|ENST00000396463|WRAP53'] 82143 7667 PTDPKVVVY True H1975_Epitope_Rep2 1016.5542471591598 1016.55314993586 34.443 2 0.15322165453490197 0.0008658797794285193 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 132301 13970 VYLPGSRQTL True PC9_epitope_Rep3 1132.62405805448 1132.62296993586 58.81 2 0.15322133728206813 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 74157 8464 NHYQKQLEI True PC9_epitope_Rep1 1171.5985715826298 1171.59691490379 37.392 3 0.15321710109209102 0.0008658797794285193 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 125850 12266 VNQIGSVTESL True NCI_RA007_Epitope_Rep2 1145.59281749585 1145.59172993586 52.313 2 0.15321664456430492 0.0008658797794285193 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 740 10384 AAVPRAAFL True H1975_Epitope_Rep2 914.5337864980999 914.53268993586 44.953 2 0.15321529536984752 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 125457 9043 VLTVINQTQK True PC9_epitope_Rep1 1142.66592286646 1142.66482993586 39.636 2 0.15320959890961072 0.0008658797794285193 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 135220 9376 YAYDGKDYL True NCI_RA007_Epitope_Rep4 1106.4920408254197 1106.49147496793 42.92 1 0.15320788807130425 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 28401 16210 FSDVMEDLY True H1975_Epitope_Rep2 1117.4637774722498 1117.46268993586 67.561 2 0.1532051978735653 0.0008658797794285193 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 61301 7339 LLDVRDRDSY True H1975_Epitope_Rep3 1250.62551460646 1250.62387490379 33.206 3 0.15320392797248925 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 102946 13585 SQIPAAVKL True PC9_epitope_Rep5 925.55966689277 925.55856993586 57.277 2 0.15319425657773547 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 113683 18244 TRDELPYTF True PC9_epitope_Rep5 1140.54513902744 1140.5440499358601 75.189 2 0.15318497724484056 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000087269|P78316-2|NOP14', 'ENSG00000087269|ENST00000416614|NOP14'] 139808 20346 YVDDQLFVFY True H1975_Epitope_Rep2 1307.60740493083 1307.60630993586 84.314 2 0.15318182789839738 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000010704|Q30201-10|HFE', 'nc|ENSG00000010704|Q30201-7|HFE', 'nc|ENSG00000010704|Q30201-8|HFE', 'nc|ENSG00000010704|Q30201-5|HFE', 'nc|ENSG00000010704|Q30201-3|HFE', 'ENSG00000010704|ENST00000357618|HFE', 'nc|ENSG00000010704|Q30201-9|HFE', 'ENST00000486147.1_1_6:26087668-26093021:+|nuORF', 'ENST00000483782.1_1_6:26087668-26091517:+|nuORF'] 116674 18927 TYIQKIFRM True PC9_epitope_Rep1 1198.65325000778 1198.65160490379 77.587 3 0.15317946411558842 0.0008658797794285193 0.9438714419765777 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 108704 5154 TEMEHEVAC True H1975_Epitope_Rep2 1047.40013166987 1047.3990299358602 24.902 2 0.15317704221134065 0.0008658797794285193 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 138809 4000 YSDHPSGGSY True H1975_Epitope_Rep2 1068.41485313388 1068.41374993586 20.457 2 0.15317263049362603 0.0008658797794285193 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1'] 32038 8658 GEVLDPTAA True H1975_Epitope_Rep1 871.4287122928699 871.42816496793 38.232 1 0.15316938418595472 0.0008658797794285193 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1', 'RUSF1|p.Q301H|1|0.38|ENSG00000140688|chr16:31493658-31493658|C/G|missense_variant', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 47265 24079 IYEPNFIFF True PC9_epitope_Rep1 1188.5855472874398 1188.5844499358602 97.432 2 0.1531671303629776 0.0008658797794285193 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 132093 15886 VYILQPEVI True NCI_RA007_Epitope_Rep3 1072.6168474157198 1072.61574993586 70.144 2 0.15316588137543533 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 1600 13767 AEFPHSFLV True NCI_RA007_Epitope_Rep4 1045.52328138405 1045.52218993586 60.18 2 0.1531624801540449 0.0008658797794285193 0.9438714419765777 ['ENSG00000146192|ENST00000274963|FGD2', 'nc|ENSG00000146192|Q7Z6J4-4|FGD2', 'ENST00000493635.1_1_6:36982749-36990230:+|nuORF', 'ENST00000464083.5_1_6:36982408-36995936:+|nuORF', 'ENST00000494343.5_1_6:36981367-36995936:+|nuORF'] 97853 5751 SHITPSTQQHL True PC9_epitope_Rep3 1247.62584895963 1247.62420490379 27.193 3 0.1531534402226615 0.0008658797794285193 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 76090 12196 NRMPDQISV True PC9_epitope_Rep3 1058.51787873378 1058.51678993586 51.944 2 0.15315183989679412 0.0008658797794285193 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant'] 3888 10245 AHDDGRWSL True PC9_epitope_Rep5 1055.47845644995 1055.47787496793 44.394 1 0.15314996978971127 0.0008658797794285193 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 131747 16996 VYAALQRQLL True PC9_epitope_Rep2 1173.6869926642098 1173.6858899358601 70.624 2 0.15314593295602133 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 37986 9706 HEGPVWQV True H1975_Epitope_Rep2 950.46101548066 950.45990993586 42.318 2 0.1531457130354005 0.0008658797794285193 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 72626 11664 MVVQDGIVKA True PC9_epitope_Rep2 1058.57941636118 1058.57830993586 50.196 2 0.1531451166143254 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 31756 11834 GELGAIAQV True NCI_RA007_Epitope_Rep5 856.4654321547599 856.46432993586 52.177 2 0.15313992302587495 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000113657|Q14195|DPYSL3', 'DPYSL3|p.A516Qfs*15|1|0.67|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant', 'ENSG00000113657|ENST00000343218|DPYSL3'] 47962 7506 KADPSHFEL True NCI_RA007_Epitope_Rep4 1042.5083595959 1042.5072699358602 35.516 2 0.15313327862643214 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENST00000524436.5_1_1:26856411-26877988:+|nuORF', 'ENST00000530607.1_1_1:26872355-26877988:+|nuORF'] 134412 9707 WTDILSHGRY True H1975_Epitope_Rep2 1246.6094706195 1246.60783490379 42.322 3 0.15312784625367473 0.0008658797794285193 0.9438714419765777 ['ENSG00000171316|ENST00000423902|CHD7'] 95485 15627 SAM[Oxidation]EVVPAL True PC9_epitope_Rep6 931.4684693103098 931.46736993586 72.312 2 0.15311837606851447 0.0008658797794285193 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 3504 12815 AGLQFPVGR True PC9_epitope_Rep6 943.5239500903898 943.52284993586 60.795 2 0.153113315299123 0.0008658797794285193 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 23566 12824 EYAVSVLLR True NCI_RA007_Epitope_Rep2 1048.59169529704 1048.5905899358602 54.5 2 0.15311288064351555 0.0008658797794285193 0.9438714419765777 ['CON__P02769'] 39512 8065 HPDYNNEL True PC9_epitope_Rep5 1000.4250238947601 1000.42392993586 35.959 2 0.15311255320208333 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 14348 11523 DTDSRFIPY True H1975_Epitope_Rep2 1112.51383889916 1112.51274993586 49.381 2 0.15311248133423008 0.0008658797794285193 0.9438714419765777 ['ENSG00000107651|ENST00000369075|SEC23IP', 'nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP'] 85052 19503 QILDGVHYL True PC9_epitope_Rep5 1056.5603951687601 1056.55928993586 80.071 2 0.15311092159183282 0.0008658797794285193 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 3873 16909 AHDDAIWSV True PC9_epitope_Rep5 1012.46140940348 1012.46030993586 70.055 2 0.15309295101442474 0.0008658797794285193 0.9438714419765777 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 21582 4391 ERSGVNSEL True PC9_epitope_Rep4 989.47778774361 989.47668993586 23.334 2 0.15309158597284417 0.0008658797794285193 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 123123 18423 VHDEGVWAL True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 75.885 2 0.15309158387112765 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 140146 9637 YVSGELEHV True PC9_epitope_Rep4 1031.4923751785898 1031.4912699358601 44.693 2 0.153091010070933 0.0008658797794285193 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 97944 18254 SHQLDFNVL True PC9_epitope_Rep4 1071.53490869691 1071.53380993586 78.286 2 0.15309061905817528 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 87529 12966 QTHSVFVNV True PC9_epitope_Rep5 1029.5243440132099 1029.5232499358601 54.883 2 0.15308748353547127 0.0008658797794285193 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 738 10196 AAVPRAAFL True H1975_Epitope_Rep2 914.5337864980999 914.53268993586 44.223 2 0.153079247557291 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 109068 8519 TFDSIVM[Oxidation]DPK True H1975_Epitope_Rep1 1167.54817618299 1167.54706993586 37.699 2 0.15307136851497052 0.0008658797794285193 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 35339 10030 GSYDPQQIFK True NCI_RA007_Epitope_Rep3 1181.57168812845 1181.5705899358602 46.545 2 0.15307088673065905 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'ENSG00000131653|ENST00000326181|TRAF7'] 106848 22853 SYIDVLPEF True PC9_epitope_Rep2 1081.53317736141 1081.53267496793 93.393 1 0.15306969902402626 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 108532 5046 TEFTPTEKDE True NCI_RA007_Epitope_Rep3 1195.52446315251 1195.52336993586 26.842 2 0.15306685204422057 0.0008658797794285193 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 43268 11232 IHDGM[Oxidation]NLEL True PC9_epitope_Rep2 1056.49099566004 1056.4898899358602 48.531 2 0.15306028304982428 0.0008658797794285193 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 74384 17400 NITDKGIIAL True PC9_epitope_Rep4 1056.6179100448799 1056.6168099358601 74.924 2 0.15305994808189383 0.0008658797794285193 0.9438714419765777 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 103315 16298 SQVDRLVAL True PC9_epitope_Rep1 999.5712942056298 999.57018993586 67.509 2 0.15305850609659938 0.0008658797794285193 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 115322 12956 TVDSYVISY True H1975_Epitope_Rep2 1045.49679185269 1045.4956899358601 54.951 2 0.1530559888872925 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 9851 19947 AYLPKILQI True PC9_epitope_Rep4 1057.65356727761 1057.6524699358602 84.861 2 0.15305493700429937 0.0008658797794285193 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 29089 10899 FTQGHIVEV True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 49.688 2 0.15305264289138223 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 109905 5329 THNPTNATL True PC9_epitope_Rep5 967.47230844035 967.47120993586 25.51 2 0.15305237340002045 0.0008658797794285193 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 103059 18015 SQLEDAIRL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 74.311 2 0.153044615218726 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 28195 20840 FRQIIAVVL True PC9_epitope_Rep5 1057.6648006676498 1057.6637099358602 85.211 2 0.1530400205455456 0.0008658797794285193 0.9438714419765777 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 76100 20082 NRNFSNFIL True PC9_epitope_Rep1 1123.57744221523 1123.5763499358602 82.073 2 0.1530396618616106 0.0008658797794285193 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 22796 6798 EVDPNIQAVR True H1975_Epitope_Rep1 1139.5934862021898 1139.5923899358602 31.191 2 0.15302858577419204 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 47838 9329 IYSTKLYRF True NCI_RA007_Epitope_Rep4 1189.6495445263297 1189.64844993586 42.741 2 0.1530242226999575 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENSG00000148925|ENST00000278174|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 74217 12098 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 51.618 2 0.15302247402600377 0.0008658797794285193 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 138195 10841 YQRADFVL True NCI_RA007_Epitope_Rep4 1010.5185303567798 1010.51742993586 48.55 2 0.15301706357797212 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF', 'FKBP8|p.A241V|1|0.13|ENSG00000105701|chr19:18538263-18538263|G/A|missense_variant'] 25193 8868 FEADPPGQV True H1975_Epitope_Rep1 958.4396113297399 958.43850993586 39.024 2 0.1530155050430438 0.0008658797794285193 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 72624 12284 MVVQDGIVKA True PC9_epitope_Rep1 1058.57941636118 1058.57830993586 52.104 2 0.15301147856913855 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 122817 5931 VGVNGFGR True NCI_RA007_Epitope_Rep3 804.4242360491198 804.42312993586 30.309 2 0.15300240590246625 0.0008658797794285193 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 8800 20219 AVFPDDM[Oxidation]PTL True PC9_epitope_Rep1 1120.51106239828 1120.50996993586 82.603 2 0.15299623446994876 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 94464 14829 RYGDLVDYL True NCI_RA007_Epitope_Rep5 1112.5502244078798 1112.54912993586 63.711 2 0.15299196562883782 0.0008658797794285193 0.9438714419765777 ['ENSG00000113721|ENST00000261799|PDGFRB', 'ENST00000520579.5_1_5:149495328-149514444:-|nuORF'] 40743 17314 HTVGELIEV True PC9_epitope_Rep3 995.5287606873098 995.52766993586 71.773 2 0.1529867595651226 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 76167 14728 NRSEWTDEL True PC9_epitope_Rep1 1148.50981614788 1148.50870993586 61.474 2 0.15298314196048066 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 62774 15906 LMDHTIPEV True PC9_epitope_Rep1 1053.51648175145 1053.5153899358602 65.993 2 0.15298281149215487 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 75509 19234 NQITQLESL True PC9_epitope_Rep4 1044.54513902744 1044.5440499358601 82.084 2 0.15297274271750183 0.0008658797794285193 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 40241 15230 HRIFEPNCL True PC9_epitope_Rep5 1127.5545985956699 1127.5535099358601 63.591 2 0.15297186580376415 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF'] 74540 19654 NLAEKLIGV True PC9_epitope_Rep5 955.5702315764698 955.56912993586 80.656 2 0.15297010271403955 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 8550 18781 ATYVFLHTV True PC9_epitope_Rep3 1049.5545815123298 1049.5534899358602 77.461 2 0.1529684509849165 0.0008658797794285193 0.9438714419765777 ['ENSG00000123353|ENST00000243045|ORMDL2'] 113407 21375 TQLNMFQTL True PC9_epitope_Rep2 1094.54303085246 1094.54192993586 87.688 2 0.15296810300696906 0.0008658797794285193 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 105251 6476 STSQTFIYK True NCI_RA007_Epitope_Rep3 1073.5393253710097 1073.53822993586 32.505 2 0.15296636826280366 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 32046 13617 GEVLMVQV True NCI_RA007_Epitope_Rep3 873.4629896266098 873.4624449679301 60.862 1 0.15296629967123088 0.0008658797794285193 0.9438714419765777 ['ENSG00000120948|ENST00000240185|TARDBP'] 96142 11210 SEEDFLRQV True H1975_Epitope_Rep3 1121.53530261973 1121.5342099358602 48.219 2 0.1529581652589716 0.0008658797794285193 0.9438714419765777 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 105356 16862 STYEGKPIFL True PC9_epitope_Rep2 1153.60192562757 1153.60082993586 70.107 2 0.15295428883343426 0.0008658797794285193 0.9438714419765777 ['ENSG00000132623|ENST00000378392|ANKEF1'] 47504 14097 IYLEKLKTI True PC9_epitope_Rep2 1119.69034670915 1119.68924993586 59.499 2 0.1529515676652906 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 103268 10136 SQTFVNPHV True PC9_epitope_Rep2 1027.5086939490698 1027.50758993586 44.327 2 0.15295074985772444 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000602029.1_1_19:50519188-50519419:-|nuORF'] 69972 22623 LYEQAFQLL True PC9_epitope_Rep3 1123.5913609438699 1123.59026993586 92.287 2 0.15294678981062337 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 109520 16427 THADYVLEM True PC9_epitope_Rep3 1077.48009624273 1077.47898993586 68.323 2 0.15294645240261937 0.0008658797794285193 0.9438714419765777 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 102761 3885 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 21.125 2 0.15293854923342187 0.0008658797794285193 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 73274 5488 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 26.122 2 0.15293647905297353 0.0008658797794285193 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 120300 10836 VFPEKGYSF True NCI_RA007_Epitope_Rep4 1072.5229470308798 1072.52184993586 48.532 2 0.15292950486269116 0.0008658797794285193 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 89619 9348 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.54912993586 40.918 2 0.15292942208129817 0.0008658797794285193 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 114830 11899 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.49807496793 50.77 1 0.1529270614805674 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 52745 13865 KQLSDTSIIAV True PC9_epitope_Rep6 1173.6605031328502 1173.6594099358601 65.154 2 0.15292440408016475 0.0008658797794285193 0.9438714419765777 ['ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000145743|Q9UF56-3|FBXL17', 'nc|ENSG00000145743|Q9UF56-2|FBXL17'] 14086 9977 DSDPLQDHNMY True H1975_Epitope_Rep3 1333.5244802358502 1333.5233899358602 43.412 2 0.15291758692796228 0.0008658797794285193 0.9438714419765777 ['ENSG00000010404|ENST00000340855|IDS'] 70335 16743 LYPQFMFHL True NCI_RA007_Epitope_Rep3 1194.5895871220598 1194.58848993586 73.7 2 0.1529136778108803 0.0008658797794285193 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 14640 9121 DVNAAIATIK True H1975_Epitope_Rep1 1014.57095985246 1014.56986993586 39.988 2 0.15291048882988031 0.0008658797794285193 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 108948 5514 TETQPPAAP True H1975_Epitope_Rep3 910.4396113297398 910.43850993586 26.26 2 0.15290740380289114 0.0008658797794285193 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 13879 7593 DRDPASGTAL True PC9_epitope_Rep1 1001.47778774361 1001.47668993586 34.028 2 0.15290669098102083 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 70216 22903 LYLPSFFTY True PC9_epitope_Rep4 1149.57464825057 1149.57354993586 96.315 2 0.15290615855038295 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 28101 14624 FREDSTLAL True PC9_epitope_Rep2 1050.53457434374 1050.53346993586 61.519 2 0.1528959005278567 0.0008658797794285193 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671'] 43392 18292 IHSDVVFVV True PC9_epitope_Rep2 1013.55458151233 1013.55348993586 75.685 2 0.15289055477333224 0.0008658797794285193 0.9438714419765777 ['ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1', 'ENST00000464431.1_1_3:127395028-127395444:+|nuORF', 'ENST00000491633.5_1_3:127394949-127398855:+|nuORF'] 112576 11000 TPAPHSPWTA True PC9_epitope_Rep5 1063.50869394907 1063.50758993586 47.299 2 0.15288949008419897 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 102178 21955 SPSAAWLLGAA True PC9_epitope_Rep1 1042.5447451046198 1042.54364993586 89.268 2 0.15288797287736272 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 35925 9955 GVAPFTIAR True NCI_RA007_Epitope_Rep1 930.5287011176599 930.52760993586 42.727 2 0.15288755457189251 0.0008658797794285193 0.9438714419765777 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 75793 11321 NRAQIQTVI True PC9_epitope_Rep1 1041.59309227937 1041.59198993586 48.425 2 0.1528834688450199 0.0008658797794285193 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 107214 20295 SYPDNFLHI True PC9_epitope_Rep3 1104.52400966004 1104.52290993586 83.315 2 0.1528814671014539 0.0008658797794285193 0.9438714419765777 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 54265 14379 KYPLLLQSI True NCI_RA007_Epitope_Rep4 1073.6484818971699 1073.64738993586 62.617 2 0.15287177492564594 0.0008658797794285193 0.9438714419765777 ['ENST00000600274.5_1_19:42396347-42410935:+|nuORF', 'nc|ENSG00000076928|Q92888-2|ARHGEF1', 'ENSG00000076928|ENST00000354532|ARHGEF1', 'nc|ENSG00000076928|Q92888-3|ARHGEF1', 'nc|ENSG00000076928|Q92888-4|ARHGEF1', 'ENST00000595897.5_1_19:42402462-42407822:+|nuORF'] 37755 10097 HAVGDIPGV True PC9_epitope_Rep6 863.45011644379 863.44900993586 49.444 2 0.1528711375272279 0.0008658797794285193 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 120435 13916 VFTPVVQRI True PC9_epitope_Rep6 1057.6284151589298 1057.62730993586 65.37 2 0.15286997330532903 0.0008658797794285193 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 67560 8011 LTEQYNEQY True H1975_Epitope_Rep1 1186.51423282198 1186.5131299358602 35.758 2 0.15286562337693885 0.0008658797794285193 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 87568 5042 QTMSDTTFK True NCI_RA007_Epitope_Rep3 1057.47501086229 1057.47390993586 26.827 2 0.15286540804419493 0.0008658797794285193 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF', 'CTTNBP2NL-CAPZA1|1|fusion'] 4645 16798 ALATLIHQV True PC9_epitope_Rep3 964.5705659296401 964.56946993586 69.761 2 0.15285919657448815 0.0008658797794285193 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 37241 6563 GVVEVTHDLQK True NCI_RA007_Epitope_Rep1 1223.6510010783097 1223.64934490379 29.543 3 0.15285672185469068 0.0008658797794285193 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 11656 14949 DHDGNIVEL True PC9_epitope_Rep5 1010.46688870674 1010.46578993586 62.503 2 0.15284650113378784 0.0008658797794285193 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 1860 10040 AEIETELQA True H1975_Epitope_Rep1 1002.4869554449798 1002.48637496793 43.559 1 0.15284549873364237 0.0008658797794285193 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A'] 21078 10131 ERDPATYNI True PC9_epitope_Rep1 1077.5090878718902 1077.50798993586 43.842 2 0.15284280434515668 0.0008658797794285193 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 24241 15505 EYYDKHFTEF True PC9_epitope_Rep1 1377.5877321154096 1377.5866299358602 64.462 2 0.15283935829607426 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 63985 18820 LQAPELANV True PC9_epitope_Rep5 953.5181960036099 953.51708993586 77.404 2 0.15283636218019583 0.0008658797794285193 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 32418 6594 GGGQIIPTAR True NCI_RA007_Epitope_Rep2 968.5403284305199 968.53922993586 30.258 2 0.15283623049896147 0.0008658797794285193 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 70920 12790 M[Oxidation]ELITPISA True H1975_Epitope_Rep2 989.5103341222899 989.50922993586 54.303 2 0.1528301852477566 0.0008658797794285193 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 21302 8040 ERISKNYAL True PC9_epitope_Rep5 1092.5927579262 1092.5916699358602 35.863 2 0.15282570171042814 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 75368 12150 NQDDSILKV True PC9_epitope_Rep4 1030.5294889632999 1030.52838993586 54.552 2 0.15282266593357308 0.0008658797794285193 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 138974 10429 YSETATAIAY True H1975_Epitope_Rep2 1088.5026055091198 1088.50207496793 45.129 1 0.1528057800738543 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 47336 19501 IYGYVAEQF True PC9_epitope_Rep4 1088.5178616504397 1088.51727496793 83.129 1 0.15280488248840587 0.0008658797794285193 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 126912 9771 VPVDTGVAA True PC9_epitope_Rep2 827.4388830537498 827.43833496793 42.923 1 0.15280381071972937 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 67166 10362 LTDFIQKY True H1975_Epitope_Rep2 1026.53859709502 1026.53750993586 44.866 2 0.1528030806714582 0.0008658797794285193 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 1400 14501 AEEFPNLAV True H1975_Epitope_Rep3 988.4865615221598 988.48601496793 61.14 1 0.15279809887726872 0.0008658797794285193 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 40685 6230 HTLNQIDSVK True PC9_epitope_Rep5 1153.6091362663299 1153.60750490379 28.942 3 0.1527962223517261 0.0008658797794285193 0.9438714419765777 ['CON__P12763'] 47839 14459 IYSTKLYRF True PC9_epitope_Rep1 1189.6495445263297 1189.64788490379 60.44 3 0.15279417673036055 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENSG00000148925|ENST00000278174|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 6864 13592 AQIGSYVHV True PC9_epitope_Rep1 972.50288029264 972.50178993586 57.137 2 0.1527938144664432 0.0008658797794285193 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 127543 20142 VQVPVPVTV True PC9_epitope_Rep1 936.5644179200399 936.56386496793 82.305 1 0.15278634381055956 0.0008658797794285193 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 28026 17895 FRADDTFEAL True PC9_epitope_Rep4 1183.55095268387 1183.54984993586 76.871 2 0.1527832667623974 0.0008658797794285193 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 106397 18710 SVTDLAFKV True PC9_epitope_Rep2 978.5385970950199 978.53750993586 77.34 2 0.1527724291868032 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 35664 5396 GTM[Oxidation]TGMLYK True NCI_RA007_Epitope_Rep3 1016.46708941132 1016.46598993586 28.235 2 0.15277218216230826 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 138018 21169 YQDEVFGGF True PC9_epitope_Rep2 1060.4501760134397 1060.44967496793 86.882 1 0.15277214415673823 0.0008658797794285193 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 87859 21552 QVLEDFPTI True PC9_epitope_Rep2 1060.54407639828 1060.54357496793 88.369 1 0.15277107115286806 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 91818 8610 RPNDIM[Oxidation]AEV True PC9_epitope_Rep3 1059.50189469691 1059.5007899358602 38.066 2 0.15276963124031195 0.0008658797794285193 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 46427 5442 ITLEEEM[Oxidation]TK True H1975_Epitope_Rep3 1108.53219176568 1108.53108993586 25.991 2 0.1527655716280456 0.0008658797794285193 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 20026 8584 EM[Oxidation]TADVIELK True H1975_Epitope_Rep1 1163.5743909308298 1163.5732899358602 37.946 2 0.15275186505683233 0.0008658797794285193 0.9438714419765777 ['ENSG00000067704|ENST00000366922|IARS2'] 138584 17491 YRPPELLL True PC9_epitope_Rep6 999.5753169569099 999.57420993586 79.907 2 0.15275118352246386 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 17407 5759 EHFPNHQQL True PC9_epitope_Rep2 1148.53630567924 1148.53465490379 27.546 3 0.1527498253060926 0.0008658797794285193 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 129419 13445 VTEIMSMGY True H1975_Epitope_Rep1 1029.45110461357 1029.45057496793 56.83 1 0.15274379062065632 0.0008658797794285193 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 102748 4943 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 23.875 2 0.15272579774626557 0.0008658797794285193 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 8051 6207 ATDYHVRVY True H1975_Epitope_Rep3 1122.5458077337798 1122.54415490379 28.888 3 0.15271960591566947 0.0008658797794285193 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF'] 88505 10225 RADDTFEAL True NCI_RA007_Epitope_Rep1 1036.48253877088 1036.4814499358602 43.785 2 0.15271907876015225 0.0008658797794285193 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 86718 13595 QRISEAYESL True PC9_epitope_Rep5 1194.5880664685797 1194.58696993586 57.318 2 0.15271432895653103 0.0008658797794285193 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 37315 10957 GVVPTIQKV True PC9_epitope_Rep6 939.5753169569098 939.57420993586 53.029 2 0.15271328974540846 0.0008658797794285193 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 120159 11421 VFLENVIR True NCI_RA007_Epitope_Rep3 988.5705659296399 988.56946993586 52.05 2 0.15271213377291767 0.0008658797794285193 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 4646 14938 ALATLIHQV True PC9_epitope_Rep4 964.5705659296401 964.56946993586 65.4 2 0.1527105607685194 0.0008658797794285193 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 138972 15802 YSESSQLLYL True H1975_Epitope_Rep2 1201.58666948625 1201.5855699358601 65.969 2 0.15270971763112207 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 67174 9346 LTDFQKAVY True H1975_Epitope_Rep2 1083.5600608155898 1083.5589699358602 40.91 2 0.15270433121829552 0.0008658797794285193 0.9438714419765777 ['ENSG00000182150|ENST00000653738|ERCC6L2', 'nc|ENSG00000182150|Q5T890-2|ERCC6L2'] 129300 10849 VTDSGPTFNY True H1975_Epitope_Rep1 1099.4822044177101 1099.48110993586 46.689 2 0.15269279709224076 0.0008658797794285193 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 53933 5388 KYISKPENL True NCI_RA007_Epitope_Rep4 1090.60225998074 1090.60116993586 27.294 2 0.15268265802902942 0.0008658797794285193 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 94473 15265 RYGLVTNEI True PC9_epitope_Rep5 1063.56620882519 1063.5651099358602 63.726 2 0.15268204728093843 0.0008658797794285193 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 46194 16841 ITDIQIPLDY True H1975_Epitope_Rep2 1189.6230549949698 1189.6219499358601 70.025 2 0.15268157037589247 0.0008658797794285193 0.9438714419765777 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 90465 15648 RITNQVIYL True PC9_epitope_Rep4 1118.64479349906 1118.64368993586 68.118 2 0.15267459129178057 0.0008658797794285193 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 76865 19875 NVIESFTEL True PC9_epitope_Rep6 1050.5233409537 1050.5222499358601 89.105 2 0.1526704441221359 0.0008658797794285193 0.9438714419765777 ['RAB40A|p.I163V|1|0.09|ENSG00000172476|chrX:103500270-103500270|T/C|missense_variant', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENSG00000197562|ENST00000248139|RAB40C'] 1863 10035 AEIETELQA True H1975_Epitope_Rep2 1002.4869554449798 1002.48584993586 43.591 2 0.1526679250178588 0.0008658797794285193 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A'] 117424 5287 VADPETRTV True PC9_epitope_Rep3 986.50327421546 986.50216993586 25.415 2 0.15266487267120799 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000595792.1_1_19:50369586-50370764:-|nuORF', 'ENST00000594661.5_1_19:50367579-50369988:-|nuORF'] 134420 14719 WTEMNTIVY True H1975_Epitope_Rep1 1155.52704643515 1155.5259499358601 61.836 2 0.15266406326857743 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 53714 12076 KYDPNVYSI True PC9_epitope_Rep6 1097.53932537101 1097.53822993586 57.771 2 0.1526622594109543 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 108230 5095 TEAGAGAVAAA True H1975_Epitope_Rep2 887.4348603024698 887.43431496793 24.68 1 0.1526591663627007 0.0008658797794285193 0.9438714419765777 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 103806 12772 SRGDFVVEY True PC9_epitope_Rep6 1070.50327421546 1070.5021699358601 60.621 2 0.1526542628052559 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 36555 14243 GVLDAILATK True NCI_RA007_Epitope_Rep3 999.59644632431 999.59534993586 63.337 2 0.152654102177396 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 116766 18456 TYLEKFQNL True PC9_epitope_Rep5 1154.5971746002997 1154.5960699358602 76.012 2 0.15265272298887286 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 114817 19759 TTDFIFNLY True H1975_Epitope_Rep2 1132.54407639828 1132.54357496793 81.975 1 0.1526526830872882 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 106734 19643 SYDPDFNQL True PC9_epitope_Rep3 1097.46655435357 1097.46597496793 80.794 1 0.15264828746037795 0.0008658797794285193 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 32522 5684 GGPTTPLSPTR True H1975_Epitope_Rep3 1082.57202248162 1082.57092993586 26.892 2 0.15264063214158088 0.0008658797794285193 0.9438714419765777 ['ENSG00000113368|ENST00000261366|LMNB1', 'LMNB1|p.P510Qfs*18|1|0.23|ENSG00000113368|chr5:126826020-126826020|C/-|frameshift_variant'] 58392 13627 LEVNLQAMK True PC9_epitope_Rep4 1044.5637662970398 1044.5626699358602 60.309 2 0.1526371836910789 0.0008658797794285193 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 117007 16282 TYQDIQNTI True PC9_epitope_Rep1 1094.52440358286 1094.52387496793 67.447 1 0.15263532078224953 0.0008658797794285193 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 73877 10689 NHHLFTTTI True PC9_epitope_Rep4 1082.5508931142201 1082.5497899358602 48.867 2 0.1526338532144412 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 106663 23057 SYADQMFLL True PC9_epitope_Rep5 1086.50558271458 1086.5044899358602 93.676 2 0.1526305944782563 0.0008658797794285193 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 2621 9020 AESPGSPLV True H1975_Epitope_Rep2 855.43379767331 855.43324496793 39.648 1 0.15263057473493052 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000172059|O14901-2|KLF11', 'ENSG00000172059|ENST00000305883|KLF11'] 21554 17950 ERSDTFINL True PC9_epitope_Rep1 1093.54038800017 1093.53928993586 73.835 2 0.15262797311693804 0.0008658797794285193 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 61983 14996 LLLPGELAK True PC9_epitope_Rep6 952.5957180483199 952.59462993586 69.701 2 0.15262148110167328 0.0008658797794285193 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 107780 18771 TAM[Oxidation]DVVYAL True PC9_epitope_Rep4 997.4790339940099 997.47792993586 80.285 2 0.15262112525181917 0.0008658797794285193 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 21136 20829 ERDRLILFL True PC9_epitope_Rep5 1173.6869926642098 1173.6853349037901 85.167 3 0.15261616795304542 0.0008658797794285193 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 43294 6892 IHDSQAPSL True PC9_epitope_Rep2 966.47705946762 966.47596993586 31.912 2 0.15260942012672019 0.0008658797794285193 0.9438714419765777 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF'] 42599 9644 IESWIEEKA True H1975_Epitope_Rep2 1103.54989005471 1103.5487899358602 42.074 2 0.15259483686510655 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000023041|Q9H6R6-2|ZDHHC6', 'ENSG00000023041|ENST00000369405|ZDHHC6'] 7051 15908 AQVALVNEV True PC9_epitope_Rep4 941.51819600361 941.51708993586 69.117 2 0.15259097119238493 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 102685 4001 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 21.628 2 0.1525904673866723 0.0008658797794285193 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 108826 6789 TEQPVTPEP True H1975_Epitope_Rep3 996.47639076128 996.47528993586 31.069 2 0.15258570169518007 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1'] 31593 5646 GEFTSARAV True NCI_RA007_Epitope_Rep5 936.4664947839199 936.46538993586 28.405 2 0.15257061109134495 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 86694 13901 QRIDEFESM True PC9_epitope_Rep2 1153.5073736197298 1153.50626993586 58.751 2 0.15257006491157918 0.0008658797794285193 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 102467 7162 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 32.941 2 0.1525692116583741 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 46900 17848 IVIRGLNTI True PC9_epitope_Rep3 997.62841515893 997.62730993586 73.848 2 0.15256886330826588 0.0008658797794285193 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 70493 21025 LYSSEQLLI True PC9_epitope_Rep2 1064.57537652656 1064.57426993586 86.325 2 0.15256829392691562 0.0008658797794285193 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 71360 21088 MHYPTALLF True PC9_epitope_Rep5 1091.54738795691 1091.5462899358602 86.178 2 0.1525604325404044 0.0008658797794285193 0.9438714419765777 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 104232 11375 SSDNIMVQY True H1975_Epitope_Rep2 1055.45936079815 1055.45877496793 48.803 1 0.15255273212153386 0.0008658797794285193 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 82146 7721 PTDPKVVVY True H1975_Epitope_Rep3 1016.5542471591598 1016.55314993586 34.682 2 0.15255062495786878 0.0008658797794285193 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 75045 7558 NMEADPGQY True H1975_Epitope_Rep2 1023.3967605415899 1023.3956699358599 34.025 2 0.152546259723011 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 90192 18784 RHIEIFTDL True PC9_epitope_Rep1 1142.6084079903399 1142.6067749037902 77.036 3 0.15254318824689367 0.0008658797794285193 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 76097 9940 NRNELAETL True PC9_epitope_Rep2 1058.5356369729 1058.53452993586 43.564 2 0.15254203669064723 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'RSF1|p.K386Nfs*6|1|0.19|ENSG00000048649|chr11:77702071-77702071|T/-|frameshift_variant'] 76571 6897 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 31.449 2 0.1525369710039212 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 76067 15902 NRLTEMETL True PC9_epitope_Rep3 1105.5437591284501 1105.5426699358602 66.316 2 0.15253523506738847 0.0008658797794285193 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 115296 17350 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54427496793 72.031 1 0.15252365088323408 0.0008658797794285193 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 102510 9985 SPYSGPKFNSA True PC9_epitope_Rep3 1153.54038800017 1153.53928993586 43.363 2 0.15252148347441116 0.0008658797794285193 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 114839 12105 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.49807496793 51.645 1 0.15251080433770914 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 104616 5983 SSVENIQRV True PC9_epitope_Rep6 1030.5407223533398 1030.5396299358601 31.329 2 0.1525098420518105 0.0008658797794285193 0.9438714419765777 ['ENSG00000173801|ENST00000393931|JUP'] 68823 12002 LVDSYVAIINK True NCI_RA007_Epitope_Rep1 1233.69688864157 1233.6957899358601 50.673 2 0.15250702137487435 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000593203.1_1_19:10934344-10943016:+|nuORF'] 63873 19621 LPVDVVVNA True PC9_epitope_Rep1 924.5280324113199 924.52692993586 80.299 2 0.15250195516607917 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 133223 8128 WEDFKQNTP True H1975_Epitope_Rep2 1163.5247379360299 1163.52364993586 36.214 2 0.15249961994065067 0.0008658797794285193 0.9438714419765777 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 126766 6679 VPSLQGEKA True PC9_epitope_Rep1 927.5025459394699 927.50144993586 30.495 2 0.15249843559803 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 10081 9240 AYVHM[Oxidation]VTHF True PC9_epitope_Rep1 1119.5171508382302 1119.51604993586 40.393 2 0.15249573801164418 0.0008658797794285193 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 41982 7402 IEDGKAVIP True H1975_Epitope_Rep3 940.5229470308799 940.52184993586 33.451 2 0.1524946761739778 0.0008658797794285193 0.9438714419765777 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant'] 26078 12826 FHEGDAYVV True PC9_epitope_Rep3 1035.4661604307498 1035.4650699358601 54.355 2 0.15249384210938874 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 22993 16832 EVIRELAGI True PC9_epitope_Rep4 998.5760452328998 998.57494993586 72.721 2 0.15248966602519168 0.0008658797794285193 0.9438714419765777 ['ENSG00000066654|ENST00000396083|THUMPD1'] 57953 8053 LEQPTDPVA True H1975_Epitope_Rep1 968.4814761417199 968.48092496793 35.92 1 0.15248944805087183 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 76345 12219 NSELSCQLY True H1975_Epitope_Rep3 1055.4593607981499 1055.45826993586 52.173 2 0.15248636112122033 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 39930 15918 HQLTEVGTMNI True PC9_epitope_Rep5 1241.60742201417 1241.60632993586 66.22 2 0.1524837931473863 0.0008658797794285193 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 89460 5520 REQEITAVQA True H1975_Epitope_Rep2 1143.58840082175 1143.58730993586 26.245 2 0.1524822740360324 0.0008658797794285193 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 1890 5274 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5965849037902 25.369 3 0.152473685306029 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 32084 7909 GEYDHLPEQA True H1975_Epitope_Rep2 1157.4989171110099 1157.4978299358602 35.37 2 0.15247244228381107 0.0008658797794285193 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 104223 10450 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 45.211 2 0.15246580666672738 0.0008658797794285193 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 6288 6471 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 29.696 2 0.1524388985571027 0.0008658797794285193 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 113187 9370 TQDGTWRTV True PC9_epitope_Rep3 1062.50942222506 1062.50832993586 40.981 2 0.15243794630255256 0.0008658797794285193 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 27686 10403 FQDEVAKAQQL True PC9_epitope_Rep6 1275.64591569787 1275.6448099358602 50.749 2 0.15243782715561568 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 8861 14122 AVFPSIVGRPR True PC9_epitope_Rep3 1197.69822605425 1197.6965849037902 59.406 3 0.15243605840245777 0.0008658797794285193 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 48622 4758 KEIKIVSA True NCI_RA007_Epitope_Rep4 886.5487678558999 886.54766993586 24.735 2 0.1524352533298051 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000155792|Q8TB45-2|DEPTOR', 'ENSG00000155792|ENST00000286234|DEPTOR'] 96109 7103 SEDPWEQHA True H1975_Epitope_Rep2 1097.4414022348901 1097.4403099358601 32.251 2 0.15243104782497963 0.0008658797794285193 0.9438714419765777 ['ENSG00000101966|ENST00000371199|XIAP', 'ENST00000468691.5_1_X:122993752-123026581:+|nuORF', 'ENST00000497906.5_1_X:122993701-123026581:+|nuORF'] 96040 4978 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 24.231 2 0.15242473231480677 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 53693 17790 KYAPSGFYI True PC9_epitope_Rep5 1044.5280324113198 1044.5269299358602 73.447 2 0.152424454873281 0.0008658797794285193 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant'] 9498 9911 AWAPKPYHKF True PC9_epitope_Rep5 1243.6502132326698 1243.64857490379 43.094 3 0.15241393865694566 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 21639 9897 ERTNIQVTV True PC9_epitope_Rep2 1058.57202248162 1058.57092993586 43.4 2 0.15241291085332376 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 1194 5941 AEDDRHYNIP True H1975_Epitope_Rep2 1228.54726428576 1228.54561490379 27.834 3 0.1524124019971869 0.0008658797794285193 0.9438714419765777 ['ENSG00000154124|ENST00000284274|OTULIN'] 96476 4549 SEKELEPEA True NCI_RA007_Epitope_Rep4 1030.4818700645399 1030.48076993586 23.901 2 0.15241061304935485 0.0008658797794285193 0.9438714419765777 ['ENSG00000182827|ENST00000366812|ACBD3'] 9493 7760 AWAPKPYHKF True PC9_epitope_Rep2 1243.6502132326698 1243.64857490379 35.223 3 0.15240074173338766 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 135636 7008 YEERVQAVVA True H1975_Epitope_Rep1 1162.59823722946 1162.5971499358602 31.991 2 0.1523992850340448 0.0008658797794285193 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 123074 15699 VHAELADVL True PC9_epitope_Rep4 965.5181960036099 965.51708993586 68.312 2 0.15239891690807003 0.0008658797794285193 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 73806 10233 NHDTGEYVL True PC9_epitope_Rep2 1046.46688870674 1046.4657899358601 44.697 2 0.152387594063713 0.0008658797794285193 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 112673 22072 TPFTGPFISV True PC9_epitope_Rep2 1064.55424715916 1064.5531499358601 90.373 2 0.15238504125429214 0.0008658797794285193 0.9438714419765777 ['ENSG00000164142|ENST00000435205|FHIP1A'] 24773 16615 FAYEGPMYL True H1975_Epitope_Rep3 1089.4841189940098 1089.48357496793 69.411 1 0.1523836746645809 0.0008658797794285193 0.9438714419765777 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'RNF145|p.P393Lfs*7|1|0.15|ENSG00000145860|chr5:159163023-159163023|G/-|frameshift_variant'] 5013 18000 ALLDRIVSV True PC9_epitope_Rep6 984.59678067748 984.59568993586 81.865 2 0.15238337909010344 0.0008658797794285193 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 40115 11632 HRDLPIKL True PC9_epitope_Rep1 990.5974493838199 990.59634993586 49.622 2 0.15238313780640672 0.0008658797794285193 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 76191 15989 NRTELPLTL True PC9_epitope_Rep6 1055.59750895347 1055.59640993586 73.811 2 0.15238240673485495 0.0008658797794285193 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 76894 6457 NVKVDPEIQ True NCI_RA007_Epitope_Rep4 1040.5502244078798 1040.54912993586 31.435 2 0.15238224851156454 0.0008658797794285193 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.L163P|1|0.23|ENSG00000172867|chr12:52651655-52651655|A/G|missense_variant'] 8154 6948 ATFPDPNVK True NCI_RA007_Epitope_Rep5 987.5025459394699 987.50144993586 33.411 2 0.1523797488297456 0.0008658797794285193 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 7245 17977 ARIPLNPVL True PC9_epitope_Rep5 991.61785047523 991.61674993586 74.166 2 0.1523694302135705 0.0008658797794285193 0.9438714419765777 ['ENSG00000185338|ENST00000332029|SOCS1'] 77194 18932 NYGQYFTLW True NCI_RA007_Epitope_Rep3 1190.53965972418 1190.53856993586 82.755 2 0.15236538374414393 0.0008658797794285193 0.9438714419765777 ['ENSG00000109929|ENST00000264027|SC5D'] 103593 13987 SRDKTIIM[Oxidation]W True PC9_epitope_Rep3 1164.59612943492 1164.59502993586 58.873 2 0.152364084529162 0.0008658797794285193 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 7821 11741 ATADYICKV True PC9_epitope_Rep4 982.4793679667399 982.47826993586 52.922 2 0.15236221557346005 0.0008658797794285193 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 87715 20162 QVEEELFSV True PC9_epitope_Rep4 1078.51825557326 1078.51714993586 85.691 2 0.15234752248530578 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 9683 13018 AYHELAQVY True PC9_epitope_Rep3 1092.5240096600398 1092.52290993586 55.103 2 0.15234413959863535 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENSG00000141030|ENST00000268717|COPS3'] 103670 6195 SRDPSTNVI True PC9_epitope_Rep4 987.49852318819 987.4974299358599 30.867 2 0.15234376256974091 0.0008658797794285193 0.9438714419765777 ['ENSG00000014824|ENST00000264451|SLC30A9', 'ENST00000509683.5_1_4:42065060-42077708:+|nuORF'] 112206 14157 TLVYHVVGV True PC9_epitope_Rep6 985.5596668927699 985.55856993586 66.324 2 0.1523429652573474 0.0008658797794285193 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 113971 7476 TRLEADEVAA True PC9_epitope_Rep2 1073.53530261973 1073.5342099358602 34.128 2 0.1523424041875053 0.0008658797794285193 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'nc|ENSG00000136811|Q5BJF6-9|ODF2', 'nc|ENSG00000136811|Q5BJF6-8|ODF2', 'nc|ENSG00000136811|Q5BJF6-5|ODF2'] 109590 8280 THDDSHLVSL True PC9_epitope_Rep6 1122.5305515924601 1122.5289149037899 41.459 3 0.15233789620806035 0.0008658797794285193 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 53839 10535 KYGNANVW True PC9_epitope_Rep5 950.46101548066 950.45990993586 45.51 2 0.15233447701891015 0.0008658797794285193 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 98069 18051 SHVDLVVMV True PC9_epitope_Rep4 997.52665251233 997.52554993586 77.498 2 0.15233221506074038 0.0008658797794285193 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 108370 9072 TEDPNQLTV True H1975_Epitope_Rep3 1015.4822044177099 1015.4816749679301 39.881 1 0.15232989229892482 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2', 'NFE2L2|p.S270L|1|0.31|ENSG00000116044|chr2:177231794-177231794|G/A|missense_variant'] 11546 10176 DGNASGTTLLE True H1975_Epitope_Rep3 1076.49858275784 1076.4974899358601 44.186 2 0.15232803124746316 0.0008658797794285193 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5'] 7427 9297 ASDAAPLQY True H1975_Epitope_Rep2 934.43961132974 934.4390649679301 40.719 1 0.15232265492580901 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 21600 18443 ERSNDYFVL True PC9_epitope_Rep2 1141.54038800017 1141.53928993586 76.273 2 0.15231728785107837 0.0008658797794285193 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.R30G|1|0.06|ENSG00000133138|chrX:106802941-106802941|C/G|missense_variant'] 76200 10164 NRVGDTITV True PC9_epitope_Rep5 973.5192586327701 973.51816993586 44.083 2 0.1523172607063716 0.0008658797794285193 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 64034 9891 LQDFFNGK True NCI_RA007_Epitope_Rep1 967.4763311916299 967.4752299358599 42.476 2 0.15230669948095543 0.0008658797794285193 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 138231 16170 YQTEIGQTL True PC9_epitope_Rep5 1051.51858992643 1051.51807496793 67.187 1 0.1523064020738416 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 91054 19368 RLLDVLAPL True PC9_epitope_Rep6 1008.6331661861999 1008.63206993586 87.15 2 0.15230586173134278 0.0008658797794285193 0.9438714419765777 ['ENSG00000182871|ENST00000651438|COL18A1'] 120170 15945 VFLENVIR True PC9_epitope_Rep6 988.5705659296399 988.56946993586 73.629 2 0.15230013253636976 0.0008658797794285193 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 126338 8853 VPKNSDPWAA True PC9_epitope_Rep2 1083.53490869691 1083.53380993586 39.405 2 0.15229906211752123 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 3385 12413 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep1 1043.58627587973 1043.5851699358602 52.781 2 0.15229767449926135 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 82130 9521 PTDENLLKY True H1975_Epitope_Rep2 1091.54989005471 1091.5487899358602 41.594 2 0.1522889543708428 0.0008658797794285193 0.9438714419765777 ['ENSG00000137547|ENST00000260102|MRPL15'] 119535 10367 VEQWPYRAVA True H1975_Epitope_Rep2 1217.61930702721 1217.61820993586 44.887 2 0.15228883504365542 0.0008658797794285193 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 11349 17955 DFDLLEDIESK True NCI_RA007_Epitope_Rep1 1322.62417719378 1322.6230899358602 73.978 2 0.15228069989369472 0.0008658797794285193 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5', 'ENST00000429133.5_1_2:216974075-216982480:+|nuORF', 'ENST00000476360.1_1_2:216974075-216981630:+|nuORF'] 94359 15277 RYALQLQQI True PC9_epitope_Rep6 1131.64004247179 1131.6389499358602 70.879 2 0.15227709291149694 0.0008658797794285193 0.9438714419765777 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant'] 131975 18752 VYGFLRNGF True PC9_epitope_Rep4 1071.5501648382299 1071.5490699358602 80.212 2 0.15227160384785993 0.0008658797794285193 0.9438714419765777 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 87084 12406 QSELVGQLY True H1975_Epitope_Rep1 1035.52367530687 1035.52256993586 52.754 2 0.15226947796173518 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L'] 138827 8622 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 38.122 2 0.1522690778752709 0.0008658797794285193 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 91643 11054 RPFQGTMGV True PC9_epitope_Rep2 991.4909357099498 991.48982993586 47.838 2 0.15226871927080332 0.0008658797794285193 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 108447 12303 TEELAYLK True PC9_epitope_Rep3 965.50696261357 965.50586993586 52.348 2 0.15226858395492343 0.0008658797794285193 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 94647 20012 RYLDLFTSF True PC9_epitope_Rep6 1160.5866099165999 1160.58550993586 89.642 2 0.15226781168369322 0.0008658797794285193 0.9438714419765777 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000462052.1_1_7:6513727-6523688:-|nuORF'] 94759 15097 RYLPDTLLL True NCI_RA007_Epitope_Rep4 1102.63864548946 1102.63754993586 65.635 2 0.15226246620085748 0.0008658797794285193 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 90489 4435 RKAALEQDL True NCI_RA007_Epitope_Rep5 1042.5771078620598 1042.5760099358602 23.698 2 0.1522561774097759 0.0008658797794285193 0.9438714419765777 ['ENSG00000100292|ENST00000216117|HMOX1'] 24220 10750 EYVKQTWNL True NCI_RA007_Epitope_Rep5 1179.59242357303 1179.5913299358601 47.987 2 0.1522543765630049 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 77599 19951 NYTDIKDYL True PC9_epitope_Rep5 1143.54480467427 1143.54370993586 81.794 2 0.15225284634245542 0.0008658797794285193 0.9438714419765777 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 139863 20545 YVDPVITSI True PC9_epitope_Rep2 1005.53826274185 1005.53716993586 84.459 2 0.15224937043590944 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 6325 5110 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 26.309 2 0.15224328396487155 0.0008658797794285193 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 138760 13702 YSDAFLNDSY True H1975_Epitope_Rep2 1193.48768372097 1193.4865899358601 57.847 2 0.15224074789284733 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 118913 3740 VEEPSRPSA True H1975_Epitope_Rep3 970.4719740871799 970.47086993586 19.46 2 0.1522342343067803 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'chr12:2868754-2872102|108|24.14|0.02|10.23|-|0|FOXM1,None|1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 31085 11718 GAYGKVFLV True H1975_Epitope_Rep3 952.5382031721999 952.53710993586 50.214 2 0.15223225510733907 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 132927 22122 VYTVVDEMF True PC9_epitope_Rep5 1101.5052483614097 1101.5041499358601 90.127 2 0.1522281384472508 0.0008658797794285193 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 43526 12034 IIDLVLDR True H1975_Epitope_Rep1 955.57023157647 955.56912993586 51.298 2 0.15222648509016942 0.0008658797794285193 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 88295 22261 QYILFPLRF True PC9_epitope_Rep2 1195.67536535135 1195.6742699358601 91.106 2 0.15221424633894495 0.0008658797794285193 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 106249 9073 SVQDVIYVR True NCI_RA007_Epitope_Rep3 1077.58185888933 1077.5807699358602 42.778 2 0.15221190657204295 0.0008658797794285193 0.9438714419765777 ['ENSG00000099282|ENST00000373290|TSPAN15'] 21609 16310 ERSPLDQVL True PC9_epitope_Rep4 1055.56112344475 1055.56002993586 70.697 2 0.15220649502120218 0.0008658797794285193 0.9438714419765777 ['ENSG00000168994|ENST00000380283|PXDC1'] 113123 12214 TQAPGNPVL True PC9_epitope_Rep3 895.4763311916299 895.47578496793 52.013 1 0.15219805357901817 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 9958 5892 AYRQGHFTY True PC9_epitope_Rep4 1141.53049202281 1141.52884490379 29.562 3 0.15219703499720427 0.0008658797794285193 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 47741 13708 IYQKPFQTL True PC9_epitope_Rep2 1136.62299542532 1136.62188993586 58.018 2 0.1521885438514311 0.0008658797794285193 0.9438714419765777 ['ATL2|p.K282Nfs*32|1|0.35|ENSG00000119787|chr2:38310406-38310406|C/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'nc|ENSG00000119787|Q8NHH9-3|ATL2'] 77322 12212 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.6069699358602 54.793 2 0.15218442858719336 0.0008658797794285193 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 44078 21509 ILLPQFLGV True PC9_epitope_Rep6 998.6164534928998 998.61534993586 95.608 2 0.1521816282306065 0.0008658797794285193 0.9438714419765777 ['ENSG00000099282|ENST00000373290|TSPAN15'] 112919 22578 TPQSIFIFA True PC9_epitope_Rep2 1022.5436824754598 1022.5425899358601 92.345 2 0.1521558748910228 0.0008658797794285193 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 127547 20066 VQVPVPVTV True PC9_epitope_Rep3 936.5644179200399 936.56386496793 82.433 1 0.15214955506234543 0.0008658797794285193 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 114128 19322 TRSELLPFL True PC9_epitope_Rep6 1074.6073453611798 1074.6062499358602 86.971 2 0.15214855786877235 0.0008658797794285193 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 102972 8667 SQIQEFKEA True PC9_epitope_Rep5 1078.5294889632999 1078.52838993586 38.281 2 0.15214848101533934 0.0008658797794285193 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 136201 19515 YGLPVVVKL True PC9_epitope_Rep4 986.6164534929 986.61534993586 83.183 2 0.15213887406389645 0.0008658797794285193 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 11794 15534 DHIRVIVQL True PC9_epitope_Rep4 1091.64512785223 1091.64402993586 67.676 2 0.15213732030778082 0.0008658797794285193 0.9438714419765777 ['ENSG00000160445|ENST00000291900|ZER1'] 134885 14763 YADGESFLGY True H1975_Epitope_Rep2 1120.4713053808398 1120.4707749679299 61.944 1 0.1521250016219797 0.0008658797794285193 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 106002 17652 SVLKSLVEI True PC9_epitope_Rep6 986.6011973515799 986.60010993586 80.537 2 0.15211982414786748 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 89318 8148 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64402993586 39.163 2 0.1521128532219549 0.0008658797794285193 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 6657 8432 AQAFIHNSL True NCI_RA007_Epitope_Rep4 999.5137793295099 999.51268993586 39.248 2 0.15211188163514391 0.0008658797794285193 0.9438714419765777 ['ENSG00000225921|ENST00000451315|NOL7'] 36232 8180 GVGEFEAGISK True H1975_Epitope_Rep1 1092.5451390274397 1092.5440499358601 36.404 2 0.15209790326595288 0.0008658797794285193 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000547505.2_1_12:44053856-44053916:+|nuORF', 'ENST00000559385.1_1_15:53230314-53230413:-|nuORF'] 72375 9658 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4684899358601 42.078 2 0.15209670525689942 0.0008658797794285193 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 40754 13425 HVADDFVAV True PC9_epitope_Rep4 971.4712458111899 971.47014993586 59.539 2 0.1520909011509872 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENSG00000048342|ENST00000424120|CC2D2A', 'ENST00000513811.5_1_4:15471657-15545375:+|nuORF'] 139872 15420 YVDPVNKVL True PC9_epitope_Rep1 1045.58079626017 1045.5796899358602 64.132 2 0.152076277481443 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 74412 14377 NIVEKLREV True PC9_epitope_Rep3 1098.6397081186199 1098.6386099358601 60.394 2 0.15207265256358438 0.0008658797794285193 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 132391 11986 VYNENLVHMI True NCI_RA007_Epitope_Rep3 1230.60669373818 1230.60558993586 54.265 2 0.152066405198708 0.0008658797794285193 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 1645 5720 AEGAPQVEA True H1975_Epitope_Rep2 870.4083112014599 870.40776496793 27.0 1 0.15205846988857896 0.0008658797794285193 0.9438714419765777 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'ENSG00000122786|ENST00000361675|CALD1', 'nc|ENSG00000122786|Q05682-5|CALD1', 'nc|ENSG00000122786|Q05682-3|CALD1', 'ENST00000472096.1_1_7:134625950-134632541:+|nuORF'] 89464 5609 REQEITAVQA True H1975_Epitope_Rep3 1143.58840082175 1143.58730993586 26.614 2 0.15205646809166742 0.0008658797794285193 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 81475 19564 PQPDVFPLF True NCI_RA007_Epitope_Rep5 1058.54368247546 1058.5425899358602 82.147 2 0.15205019707559625 0.0008658797794285193 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 91811 8383 RPNDIM[Oxidation]AEV True PC9_epitope_Rep1 1059.50189469691 1059.5007899358602 37.082 2 0.15203649844732547 0.0008658797794285193 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 104236 12737 SSDNYEHWLY True H1975_Epitope_Rep2 1312.53603089572 1312.5349299358602 54.095 2 0.1520343773738836 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000163935|Q9UHJ3-2|SFMBT1', 'ENSG00000163935|ENST00000394752|SFMBT1'] 3954 14133 AHDVDPIEL True PC9_epitope_Rep4 1007.4923751785899 1007.49126993586 62.266 2 0.15203426213088092 0.0008658797794285193 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 95977 11972 SEAEIFYNA True H1975_Epitope_Rep1 1042.46074069714 1042.46017496793 51.055 1 0.15202115545704653 0.0008658797794285193 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 114290 8075 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.5853349679301 38.854 1 0.1520197217243373 0.0008658797794285193 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 542 9551 [Acetylation]-AAQGEPQVQFK True H1975_Epitope_Rep1 1243.6197012663295 1243.6186099358601 41.663 2 0.152006848244745 0.0008658797794285193 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 97409 12437 SGFSGVIRL True H1975_Epitope_Rep2 934.52361573722 934.52250993586 52.927 2 0.15200500080345702 0.0008658797794285193 0.9438714419765777 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 77457 16475 NYPDEFTKL True PC9_epitope_Rep2 1125.53423999057 1125.5331499358601 68.612 2 0.1520047170924312 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'NF1|p.H1943Rfs*17|3|0.12|ENSG00000196712|chr17:31334853-31334863|ACCTTTGTTTG/-|frameshift_variant', 'NF1|p.R1970Sfs*6|1|0.43|ENSG00000196712|chr17:31334931-31334932|AA/-|frameshift_variant', 'NF1|p.T2108Nfs*12|1|0.16|ENSG00000196712|chr17:31336808-31336809|-/A|frameshift_variant', 'NF1|p.G1807Afs*56|1|0.52|ENSG00000196712|chr17:31327648-31327648|G/-|frameshift_variant', 'nc|ENSG00000196712|P21359-3|NF1', 'NF1|p.I679Dfs*21|1|0.39|ENSG00000196712|chr17:31226459-31226460|-/C|frameshift_variant', 'ENST00000495910.6_1_17:29490228-29576996:+|nuORF', 'NF1|p.R1250Lfs*10|1|0.15|ENSG00000196712|chr17:31235648-31235658|CTCGGCATTTA/-|frameshift_variant', 'nc|ENSG00000196712|P21359-4|NF1', 'nc|ENSG00000196712|P21359-5|NF1'] 39923 9022 HQLSQLQAL True NCI_RA007_Epitope_Rep5 1036.5665431783598 1036.5654499358602 41.361 2 0.15199837338623254 0.0008658797794285193 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 21636 16923 ERTLATDIL True PC9_epitope_Rep1 1030.56587447202 1030.56476993586 69.919 2 0.15199717460973947 0.0008658797794285193 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 114215 8318 TRVQEEPEL True PC9_epitope_Rep2 1099.5509526838698 1099.54984993586 37.36 2 0.15199054205070392 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8'] 25565 9083 FESIIKEAA True H1975_Epitope_Rep3 1006.5335117145798 1006.53240993586 39.925 2 0.15198836003317404 0.0008658797794285193 0.9438714419765777 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5', 'chrX:135885350-135888848|170|110.96|0.05|11.14|-|ENST00000611668|CT45A10,CT45A10', 'chrX:135881315-135882536|241|118.07|1.0|6.88|-|ENST00000617981|CT45A10,CT45A10', 'chrX:135781735-135785220|228|373.1|0.31|10.21|-|ENST00000487941|CT45A5,CT45A5', 'chrX:135779641-135781561|228|103.74|0.53|7.61|-|ENST00000617203|CT45A5,CT45A5'] 27741 11240 FQDRPVSSL True PC9_epitope_Rep1 1047.53490869691 1047.53380993586 48.114 2 0.15198688708612215 0.0008658797794285193 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 6082 14878 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 62.233 2 0.15198414818506212 0.0008658797794285193 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 25574 6616 FESPEVAER True NCI_RA007_Epitope_Rep2 1062.4981888350198 1062.49708993586 30.344 2 0.1519790726686478 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM', 'ENST00000602219.1_1_19:8553540-8553735:+|nuORF', 'ENST00000596295.1_1_19:8552895-8553735:+|nuORF', 'ICAM1-HNRNPM|1|fusion'] 9642 18709 AYGHFSYEF True PC9_epitope_Rep1 1119.46616043075 1119.4650699358601 76.753 2 0.15197872879028082 0.0008658797794285193 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 9953 8020 AYRQGHFTY True PC9_epitope_Rep1 1141.53049202281 1141.52884490379 35.67 3 0.15197568489044963 0.0008658797794285193 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 95000 13255 RYQDIIHSI True PC9_epitope_Rep4 1143.6036569630699 1143.60254993586 58.885 2 0.15197476847540198 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 108344 4605 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 22.817 2 0.15197185168040178 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 76265 11247 NSDNNTIFV True H1975_Epitope_Rep2 1022.46688870674 1022.46578993586 48.305 2 0.15197041465530992 0.0008658797794285193 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 94971 20130 RYPTSIASLAF True PC9_epitope_Rep2 1224.65027280232 1224.64916993586 82.841 2 0.15196207411174467 0.0008658797794285193 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 70166 16120 LYLGLFNRL True NCI_RA007_Epitope_Rep3 1107.6440652230701 1107.64296993586 71.108 2 0.15195724275568487 0.0008658797794285193 0.9438714419765777 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 11867 15457 DHNINLVSM True PC9_epitope_Rep4 1041.4913296327702 1041.49022993586 67.386 2 0.15195578151999706 0.0008658797794285193 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 123701 17753 VIPGMFKEV True PC9_epitope_Rep5 1018.5521389841799 1018.55104993586 73.306 2 0.15195355284640402 0.0008658797794285193 0.9438714419765777 ['ENSG00000122729|ENST00000309951|ACO1'] 53413 13277 KVFNDYTAV True PC9_epitope_Rep1 1055.52876068731 1055.52766993586 55.934 2 0.151949946907531 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 74000 8896 NHQGTYVL True PC9_epitope_Rep5 930.4559301002199 930.45482993586 39.162 2 0.15194446989026536 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 98478 9764 SIKTGFQAV True PC9_epitope_Rep4 949.52328138405 949.52218993586 45.198 2 0.15194420034435643 0.0008658797794285193 0.9438714419765777 ['ENSG00000125977|ENST00000374980|EIF2S2'] 40385 18642 HRTEMDWVL True PC9_epitope_Rep3 1185.5600778989299 1185.55843490379 76.926 3 0.15194018082103497 0.0008658797794285193 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 117067 13056 TYQSITERI True PC9_epitope_Rep1 1109.57168812845 1109.5705899358602 55.088 2 0.15193660018554805 0.0008658797794285193 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.E327Gfs*21|1|0.11|ENSG00000131558|chr7:133356539-133356540|-/G|frameshift_variant'] 100000 21644 SLITRLLEV True PC9_epitope_Rep2 1042.63864548946 1042.63754993586 88.728 2 0.15191882571352397 0.0008658797794285193 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 111035 15504 TLDPQTGLFY True H1975_Epitope_Rep1 1153.5655401188499 1153.56444993586 64.909 2 0.15191800019987564 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 106544 12121 SVVTGGVQSV True PC9_epitope_Rep5 931.49746055903 931.49636993586 51.612 2 0.1519116411120921 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 91819 7133 RPNDIM[Oxidation]AEV True PC9_epitope_Rep4 1059.50189469691 1059.5007899358602 34.71 2 0.1519099327496716 0.0008658797794285193 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 42953 6216 IGAEVYHNLK True NCI_RA007_Epitope_Rep1 1142.60840799034 1142.60730993586 28.215 2 0.151908521798917 0.0008658797794285193 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 135891 8551 YESLVHAVA True H1975_Epitope_Rep2 987.50254593947 987.50144993586 37.847 2 0.15190755145960036 0.0008658797794285193 0.9438714419765777 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000434185.1_1_22:41195672-41215336:-|nuORF', 'ENST00000491545.5_1_22:41213372-41215336:-|nuORF'] 16207 13463 EEFPSFGA True H1975_Epitope_Rep1 882.3759484440199 882.3753949679301 56.903 1 0.15190653167540913 0.0008658797794285193 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 120889 7627 VGDVTGAQAY True H1975_Epitope_Rep2 979.4610750503098 979.46052496793 34.29 1 0.15189632566273284 0.0008658797794285193 0.9438714419765777 ['ENSG00000185201|ENST00000616316|IFITM2', 'ENST00000527146.1_2_11:308871-309162:+|nuORF', 'ENSG00000185885|ENST00000408968|IFITM1', 'ENSG00000142089|ENST00000399808|IFITM3'] 43993 14581 ILHENFTTV True PC9_epitope_Rep3 1072.55530978832 1072.5542099358602 61.213 2 0.15189535840491164 0.0008658797794285193 0.9438714419765777 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 70995 5830 [Acetylation]-M[Oxidation]EQLSSANTR True H1975_Epitope_Rep3 1193.5346516934699 1193.53354993586 27.446 2 0.15188907819836536 0.0008658797794285193 0.9438714419765777 ['ENSG00000021355|ENST00000380739|SERPINB1'] 26188 8479 FHSGDDSQVL True PC9_epitope_Rep4 1103.48835242731 1103.48724993586 40.085 2 0.15188190889866016 0.0008658797794285193 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3'] 155 11067 AADPSVVNL True H1975_Epitope_Rep3 884.46034677432 884.4597949679301 47.661 1 0.15187731665957635 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 21130 20929 ERDRLILFL True PC9_epitope_Rep1 1173.6869926642098 1173.6858899358601 85.324 2 0.15187593919669423 0.0008658797794285193 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 61438 9276 LLEVLSQK True H1975_Epitope_Rep3 928.5593325396 928.55822993586 40.674 2 0.15187477281787054 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 17419 7064 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.5352099358602 32.139 2 0.15187369492904434 0.0008658797794285193 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 138781 11119 YSDDNPYYNY True H1975_Epitope_Rep3 1312.48841199696 1312.4878749679299 47.865 1 0.1518680951832407 0.0008658797794285193 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX'] 47362 11001 IYIAGHPAF True NCI_RA007_Epitope_Rep2 987.51780208079 987.51670993586 47.401 2 0.15186371585644343 0.0008658797794285193 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 75858 8805 NRDMTTAEI True PC9_epitope_Rep1 1049.48115887189 1049.48006993586 38.71 2 0.15185852151629525 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'nc|ENSG00000068885|Q9P2H3-2|IFT80', 'ENSG00000068885|ENST00000326448|IFT80'] 21623 12388 ERSPVIQTL True PC9_epitope_Rep5 1041.58185888933 1041.5807699358602 52.647 2 0.15185386261035863 0.0008658797794285193 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.G10576W|1|0.15|ENSG00000181143|chr19:8939229-8939229|C/A|missense_variant'] 70547 16296 LYVGKTSLI True PC9_epitope_Rep1 992.59063266788 992.58952993586 67.502 2 0.1518531983429797 0.0008658797794285193 0.9438714419765777 ['ENSG00000100228|ENST00000263116|RAB36'] 126334 9657 VPKNSDPWAA True PC9_epitope_Rep1 1083.53490869691 1083.53380993586 42.002 2 0.15184860171243814 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 84356 4433 QGAGALVHSE True NCI_RA007_Epitope_Rep4 967.47230844035 967.47120993586 23.415 2 0.15184485725167182 0.0008658797794285193 0.9438714419765777 ['ENST00000530120.5_1_1:201453843-201476204:-|nuORF', 'ENSG00000159176|ENST00000340006|CSRP1', 'ENST00000527662.5_1_1:201453843-201459740:-|nuORF'] 8155 7039 ATFPDPNVK True NCI_RA007_Epitope_Rep5 987.5025459394699 987.50144993586 33.754 2 0.1518426631941252 0.0008658797794285193 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 109613 18490 THDGGFLSL True PC9_epitope_Rep5 945.45559574705 945.45448993586 76.145 2 0.15184200357991745 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 54038 11878 KYLSVQGQLF True NCI_RA007_Epitope_Rep3 1181.64445914589 1181.6433699358602 53.85 2 0.151835943549761 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 47335 19499 IYGYVAEQF True PC9_epitope_Rep4 1088.5178616504397 1088.51676993586 83.121 2 0.1518332806721686 0.0008658797794285193 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 8106 8404 ATEPPTESLLK True NCI_RA007_Epitope_Rep4 1184.6288686514001 1184.6277699358602 39.142 2 0.15183211289366785 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000058668|P23634-5|ATP2B4', 'nc|ENSG00000058668|P23634-4|ATP2B4', 'nc|ENSG00000058668|P23634-3|ATP2B4', 'nc|ENSG00000058668|P23634-2|ATP2B4', 'nc|ENSG00000058668|P23634-7|ATP2B4', 'ENSG00000058668|ENST00000357681|ATP2B4', 'nc|ENSG00000058668|P23634-8|ATP2B4', 'nc|ENSG00000058668|P23634|ATP2B4'] 14935 11993 DYMKTTSNF True PC9_epitope_Rep2 1105.47501086229 1105.47390993586 51.449 2 0.15183183976526043 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 8716 19053 AVDLTLPKV True PC9_epitope_Rep3 954.57498260374 954.57388993586 78.51 2 0.15183137008888792 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 109515 19580 THADFVLEM True PC9_epitope_Rep1 1061.4851816231699 1061.48408993586 80.142 2 0.15183069956374792 0.0008658797794285193 0.9438714419765777 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 106044 18238 SVLQSIEKI True PC9_epitope_Rep2 1015.5913609438699 1015.59026993586 75.472 2 0.1518304274192081 0.0008658797794285193 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 138772 13354 YSDDIPHAL True PC9_epitope_Rep4 1029.47672511445 1029.47562993586 59.268 2 0.1518285495124737 0.0008658797794285193 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 133814 21029 WLVDHVYAI True PC9_epitope_Rep1 1114.5811306133398 1114.58002993586 85.716 2 0.15179906596131487 0.0008658797794285193 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000529672.1_1_11:111613245-111618714:-|nuORF', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 3885 8578 AHDDGRWSL True PC9_epitope_Rep4 1055.47845644995 1055.47734993586 40.475 2 0.15179775198643605 0.0008658797794285193 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 52695 19788 KQIDQFLVV True PC9_epitope_Rep1 1088.62299542532 1088.62188993586 80.937 2 0.15179411111090776 0.0008658797794285193 0.9438714419765777 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'nc|ENSG00000182979|Q13330-2|MTA1'] 53586 12894 KVVDVDVKL True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 54.47 2 0.15179093915752026 0.0008658797794285193 0.9438714419765777 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 52659 6960 KQFEKQVEL True PC9_epitope_Rep2 1147.6237237013097 1147.62208490379 32.169 3 0.15178151876265486 0.0009099595068019473 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 114838 12009 TTDFPGNYSGY True H1975_Epitope_Rep2 1220.49858275784 1220.49807496793 51.272 1 0.1517699201139572 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 5047 20827 ALLGILQHV True PC9_epitope_Rep5 962.59130137422 962.59020993586 85.16 2 0.15176887878475356 0.0009099595068019473 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000464812.1_1_7:44525191-44530199:-|nuORF'] 27776 9427 FQEETGVRV True PC9_epitope_Rep2 1063.52982331647 1063.5287299358602 41.601 2 0.15176695559454492 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 140422 20022 YYFEGIKQTF True PC9_epitope_Rep1 1294.6233893481397 1294.6228749679299 81.84 1 0.1517597017681905 0.0009099595068019473 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 77421 20530 NYMPGQLTI True PC9_epitope_Rep5 1035.5059170677498 1035.50480993586 84.011 2 0.1517558299240382 0.0009099595068019473 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 102541 12919 SQAIAFQQA True PC9_epitope_Rep1 962.4821448480601 962.48104993586 54.565 2 0.15174776619820968 0.0009099595068019473 0.9438714419765777 ['ZCRB1|p.W185Mfs*13|1|0.31|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant', 'ENSG00000139168|ENST00000266529|ZCRB1'] 113104 11281 TQAEQTLNV True PC9_epitope_Rep5 1002.49818883502 1002.49708993586 48.385 2 0.15174546998052002 0.0009099595068019473 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 63934 16572 LPWQGLKAA True PC9_epitope_Rep3 982.5600012459398 982.55890993586 68.883 2 0.15174198533821653 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 20665 9797 EQIAEFKEA True PC9_epitope_Rep2 1063.51858992643 1063.51748993586 43.022 2 0.15173961528872973 0.0009099595068019473 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALM1|p.T6I|2|0.38|ENSG00000198668|chr14:90400078-90400078|C/T|missense_variant'] 95969 9832 SEADIRGFVA True NCI_RA007_Epitope_Rep5 1063.52982331647 1063.5287299358602 44.463 2 0.15172015907649888 0.0009099595068019473 0.9438714419765777 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 11795 17176 DHIRVIVQL True PC9_epitope_Rep5 1091.64512785223 1091.64402993586 71.09 2 0.15171552587390671 0.0009099595068019473 0.9438714419765777 ['ENSG00000160445|ENST00000291900|ZER1'] 118051 11857 VATKIFQEL True NCI_RA007_Epitope_Rep4 1047.59644632431 1047.5953499358602 52.588 2 0.15171331992389842 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 133284 11624 WELGQVHPP True H1975_Epitope_Rep2 1061.52942939365 1061.52832993586 49.78 2 0.1517126661834236 0.0009099595068019473 0.9438714419765777 ['ENST00000573236.5_1_16:4393478-4393541:-|nuORF', 'ENST00000573450.5_1_16:4391489-4393601:-|nuORF'] 109597 11664 THDEAINVL True PC9_epitope_Rep4 1010.5032742154599 1010.50216993586 52.627 2 0.15171225402883484 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 89225 8127 REIQEAIAVA True NCI_RA007_Epitope_Rep5 1098.6033226098998 1098.6022299358601 37.945 2 0.15171171336077569 0.0009099595068019473 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 22039 4835 ESQSVEEALKK True NCI_RA007_Epitope_Rep2 1246.6404959642598 1246.63885490379 23.43 3 0.15170996095556133 0.0009099595068019473 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 115842 6729 TVNDLPVGR True NCI_RA007_Epitope_Rep1 969.5243440132099 969.52324993586 30.185 2 0.15170493661952228 0.0009099595068019473 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 94673 7875 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.61488490379 36.986 3 0.1517039256455536 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 44786 19667 IPTPIVGV True PC9_epitope_Rep2 794.49019035062 794.4896449679301 81.035 1 0.1517008899832404 0.0009099595068019473 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 104318 13840 SSENPWMTEY True H1975_Epitope_Rep3 1242.48630382198 1242.4852099358602 58.543 2 0.15170032137199466 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000154429|Q6IQ19-2|CCSAP', 'ENST00000483092.1_1_1:229460984-229462796:-|nuORF', 'ENSG00000154429|ENST00000284617|CCSAP'] 112982 15701 TPSPLPTV True PC9_epitope_Rep1 810.4487194614601 810.44762993586 65.216 2 0.15169854125765972 0.0009099595068019473 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 84898 14608 QHSITPLAL True PC9_epitope_Rep4 978.5498304850599 978.54872993586 64.119 2 0.15169561392786993 0.0009099595068019473 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 24034 10342 EYQDLLNVK True H1975_Epitope_Rep3 1120.5764391557198 1120.57534993586 44.833 2 0.1516920203293241 0.0009099595068019473 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 6914 20611 AQLDPEALGNI True PC9_epitope_Rep5 1139.58225281215 1139.5811499358601 84.329 2 0.15168836548863848 0.0009099595068019473 0.9438714419765777 ['ENSG00000134690|ENST00000373055|CDCA8'] 112669 4589 TPFQGQGHGA True PC9_epitope_Rep5 998.4569927293797 998.45588993586 22.712 2 0.15168321085832612 0.0009099595068019473 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 62162 13376 LLPGKTYSF True PC9_epitope_Rep6 1024.5593325395998 1024.55822993586 63.119 2 0.15167855500078614 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 52487 8063 KPLQPLPNTA True PC9_epitope_Rep4 1077.61824439805 1077.6171499358602 38.465 2 0.15167460934626942 0.0009099595068019473 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'ENST00000436442.2_2_6:30314274-30314587:+|nuORF'] 9581 19809 AYDDKIYYF True PC9_epitope_Rep1 1196.5389910178399 1196.5378899358602 81.011 2 0.1516655190983978 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 135492 10977 YEDGNVQLV True H1975_Epitope_Rep2 1035.4872897981497 1035.48618993586 47.25 2 0.15166396137415628 0.0009099595068019473 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 77203 19570 NYGRVFSEW True PC9_epitope_Rep3 1156.53015766964 1156.5290699358602 80.511 2 0.15166198779795723 0.0009099595068019473 0.9438714419765777 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 29329 17057 FVDRGFYSV True PC9_epitope_Rep3 1088.52909504048 1088.5279899358602 70.762 2 0.15166151103219913 0.0009099595068019473 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 84813 13224 QHLAQLQQL True PC9_epitope_Rep5 1077.59309227937 1077.59198993586 55.874 2 0.15165524003066527 0.0009099595068019473 0.9438714419765777 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant', 'YLPM1|p.P426Hfs*9|1|0.19|ENSG00000119596|chr14:74780567-74780567|C/-|frameshift_variant', 'YLPM1|p.G95Afs*124|1|0.21|ENSG00000119596|chr14:74763768-74763768|G/-|frameshift_variant'] 75574 19419 NQPGVLIQV True PC9_epitope_Rep2 966.5498304850599 966.54872993586 80.073 2 0.15165338220263588 0.0009099595068019473 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 76915 18575 NVLNDLAKV True PC9_epitope_Rep2 984.5603951687599 984.55928993586 76.801 2 0.1516499469879607 0.0009099595068019473 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 105006 3668 STIGPEGVHQK True NCI_RA007_Epitope_Rep2 1151.5934862021898 1151.5918349037902 18.916 3 0.15164395491023386 0.0009099595068019473 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 134501 19918 WVDETLSSV True PC9_epitope_Rep3 1034.49204082542 1034.49094993586 81.855 2 0.15163591877843063 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 18830 10377 ELEEDFIK True NCI_RA007_Epitope_Rep2 1021.4967918526899 1021.49568993586 44.955 2 0.15163251963190386 0.0009400179051029543 0.9438714419765777 ['ENSG00000103187|ENST00000262428|COTL1', 'ENST00000567278.1_1_16:84600453-84600705:-|nuORF'] 132613 20717 VYPQYVIEY True PC9_epitope_Rep5 1172.57537652656 1172.57426993586 84.745 2 0.15163234803521758 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 31915 12875 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.4912699358601 54.595 2 0.15163127240855617 0.0009400179051029543 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 31413 19311 GEDFLSWNDL True H1975_Epitope_Rep2 1194.51931820242 1194.51822993586 80.148 2 0.15162876414845014 0.0009400179051029543 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.R772Pfs*13|1|0.15|ENSG00000183856|chr1:156544452-156544462|CCTATAACCCC/-|frameshift_variant'] 95858 19099 SDLRMLDSL True PC9_epitope_Rep3 1048.52229540788 1048.52118993586 78.687 2 0.15162859929011224 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 52652 12249 KQFEGTVEI True PC9_epitope_Rep2 1049.53932537101 1049.53822993586 52.426 2 0.15162729099186845 0.0009400179051029543 0.9438714419765777 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant', 'BRCA2|p.L1390Ffs*13|1|0.17|ENSG00000139618|chr13:32338518-32338519|-/T|frameshift_variant'] 132175 8309 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 41.587 3 0.15162454689489516 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 139308 8661 YTDMESEDY True H1975_Epitope_Rep2 1151.39648575807 1151.39538993586 38.273 2 0.1516231106002314 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 24054 6153 EYQELM[Oxidation]SVK True H1975_Epitope_Rep3 1141.5325261188498 1141.5314299358602 28.68 2 0.15162304495048368 0.0009400179051029543 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 108343 4511 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 22.463 2 0.15162122331741987 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 139338 12567 YTDSSSILNY True H1975_Epitope_Rep3 1161.51898384925 1161.51847496793 53.54 1 0.15162101771160716 0.0009400179051029543 0.9438714419765777 ['ENSG00000111647|ENST00000279907|BLTP3B'] 61161 10555 LLDIRSEY True H1975_Epitope_Rep3 1007.5287606873101 1007.52766993586 45.666 2 0.15162063649514418 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 99173 21378 SLAQYLINV True PC9_epitope_Rep4 1019.5651461960299 1019.5645749679301 90.399 1 0.15161993640085575 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 120322 14550 VFPEKGYSF True PC9_epitope_Rep4 1072.5229470308798 1072.52184993586 63.879 2 0.15161484487664584 0.0009400179051029543 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 28162 18450 FRMDIEQSL True PC9_epitope_Rep4 1137.54884450889 1137.54774993586 79.038 2 0.15161379097677985 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 72575 14992 MVPEDVPRL True PC9_epitope_Rep4 1054.5481162329 1054.5470099358602 65.605 2 0.1516121233216478 0.0009400179051029543 0.9438714419765777 ['ENSG00000272333|ENST00000420124|KMT2B'] 54223 17195 KYPENFFLL True NCI_RA007_Epitope_Rep5 1169.61209638845 1169.61098993586 72.915 2 0.15160522915749597 0.0009400179051029543 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 138876 6935 YSDRETQLY True H1975_Epitope_Rep2 1173.53021723929 1173.52912993586 31.597 2 0.15160281960833125 0.0009400179051029543 0.9438714419765777 ['ENSG00000198909|ENST00000361733|MAP3K3', 'nc|ENSG00000198909|Q99759-2|MAP3K3', 'ENST00000577784.1_1_17:61765908-61766726:+|nuORF', 'ENST00000577839.1_1_17:61766126-61767181:+|nuORF'] 105820 14072 SVIPQIQKV True PC9_epitope_Rep2 1010.6124307416198 1010.61132993586 59.403 2 0.1516017168403724 0.0009400179051029543 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 77606 19870 NYTLVSHLI True PC9_epitope_Rep5 1058.5760452329 1058.57494993586 81.482 2 0.15159571992961648 0.0009400179051029543 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 31855 6519 GEPTNFVHTA True NCI_RA007_Epitope_Rep4 1071.49852318819 1071.49742993586 31.68 2 0.15159207004641836 0.0009400179051029543 0.9438714419765777 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 105170 5554 STMSTNGIPR True NCI_RA007_Epitope_Rep4 1062.51279335334 1062.5116899358602 27.96 2 0.15159147006436727 0.0009400179051029543 0.9438714419765777 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 103450 13871 SRAFLAQAL True PC9_epitope_Rep6 975.5501648382298 975.54906993586 65.18 2 0.1515857056099623 0.0009400179051029543 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 132547 17475 VYPGYYLTF True NCI_RA007_Epitope_Rep3 1121.54334812229 1121.5422499358601 76.668 2 0.1515848720503154 0.0009400179051029543 0.9438714419765777 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 6323 4529 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 23.909 2 0.15158284412362552 0.0009400179051029543 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 53414 13375 KVFNDYTAV True PC9_epitope_Rep1 1055.52876068731 1055.52766993586 56.306 2 0.15157722572669896 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 8844 8446 AVFPSIVGRPR True NCI_RA007_Epitope_Rep3 1197.69822605425 1197.6965849037902 40.304 3 0.15157705790103804 0.0009400179051029543 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 139631 12726 YTSDHFETI True PC9_epitope_Rep3 1111.4822044177101 1111.48110993586 53.971 2 0.15157206217987748 0.0009400179051029543 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 113514 11071 TQTAVITRI True PC9_epitope_Rep3 1001.5869442697699 1001.58584993586 47.585 2 0.15157175081920093 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 75464 18555 NQIGAKFWEV True PC9_epitope_Rep4 1190.60840799034 1190.60730993586 79.447 2 0.1515665453388659 0.0009400179051029543 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 129836 20972 VTLGPVPEI True PC9_epitope_Rep5 923.53278343859 923.53168993586 85.729 2 0.15156364833810546 0.0009400179051029543 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 39070 5850 HKVPGDVSL True NCI_RA007_Epitope_Rep4 950.5185303567799 950.51742993586 29.126 2 0.15156054668544086 0.0009400179051029543 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 89382 11144 REMENIIATV True H1975_Epitope_Rep2 1174.60160835774 1174.6005099358601 47.901 2 0.15156006748571785 0.0009400179051029543 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3'] 98256 8357 SIFDGRVVAK True NCI_RA007_Epitope_Rep2 1090.61349337078 1090.6123899358602 37.147 2 0.15153985697010028 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 92449 8315 RQVSMVQTL True NCI_RA007_Epitope_Rep4 1060.56991430664 1060.5688099358601 38.798 2 0.1515387769493812 0.0009400179051029543 0.9438714419765777 ['ENSG00000111913|ENST00000643898|RIPOR2', 'nc|ENSG00000111913|Q9Y4F9|RIPOR2'] 136203 20429 YGLPVVVKL True PC9_epitope_Rep5 986.6164534929 986.61534993586 83.617 2 0.15153609024331424 0.0009400179051029543 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 28415 10783 FSDYLHPQY True H1975_Epitope_Rep2 1168.5189242796 1168.5178299358602 46.507 2 0.15153517953170154 0.0009400179051029543 0.9438714419765777 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion'] 76711 12906 NTPEYMEKI True PC9_epitope_Rep3 1123.52196105471 1123.5208699358602 54.664 2 0.15153346146651644 0.0009400179051029543 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 103734 13294 SREPSQVIF True PC9_epitope_Rep5 1061.5505587610498 1061.54946993586 56.147 2 0.15153301625735108 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 29087 11517 FTQGHIVEV True PC9_epitope_Rep2 1028.52909504048 1028.5279899358602 49.626 2 0.15153034269745896 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 92442 13843 RQVEDLQATF True PC9_epitope_Rep2 1205.6040508858898 1205.6029499358601 58.53 2 0.1515290137433551 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 114415 9134 TSDTLNNVGY True H1975_Epitope_Rep2 1082.48801807414 1082.4869299358602 40.087 2 0.15152550311833138 0.0009400179051029543 0.9438714419765777 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 21606 17663 ERSPLDQVL True PC9_epitope_Rep1 1055.56112344475 1055.56002993586 72.735 2 0.15152388338911202 0.0009400179051029543 0.9438714419765777 ['ENSG00000168994|ENST00000380283|PXDC1'] 74138 10764 NHYGGVVSL True PC9_epitope_Rep6 944.4715801643599 944.47048993586 52.231 2 0.15152293973510364 0.0009400179051029543 0.9438714419765777 ['SPACA9|p.A130G|1|0.27|ENSG00000165698|chr9:132888331-132888331|C/G|missense_variant', 'nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 120299 10744 VFPEKGYSF True NCI_RA007_Epitope_Rep4 1072.5229470308798 1072.52184993586 48.174 2 0.15151933410046398 0.0009400179051029543 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 112602 5885 TPASPPRVSA True PC9_epitope_Rep3 981.52434401321 981.52324993586 27.701 2 0.1515104401460892 0.0009400179051029543 0.9438714419765777 ['ENST00000513117.1_1_5:6633573-6668378:+|nuORF'] 8980 10658 AVHEDIVAV True PC9_epitope_Rep4 951.5025459394699 951.50144993586 48.745 2 0.15150915173090543 0.0009400179051029543 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 45738 21852 ISMPDFDLHL True PC9_epitope_Rep3 1186.5692456003 1186.5681499358602 89.357 2 0.15150545196749152 0.0009400179051029543 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 47339 18347 IYGYVAEQF True PC9_epitope_Rep6 1088.5178616504397 1088.51676993586 83.214 2 0.15149670077458074 0.0009400179051029543 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 140870 16788 YYTPITPHL True PC9_epitope_Rep4 1103.56514619603 1103.56404993586 72.544 2 0.15149324757715488 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 47649 11595 IYPPKLHQF True PC9_epitope_Rep2 1141.62841515893 1141.62676490379 49.927 3 0.15148668824497336 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 48279 9137 KDLEALLNSK True NCI_RA007_Epitope_Rep1 1129.63428838501 1129.63264490379 39.544 3 0.15148621195658282 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 4288 6049 AIITPPPAK True NCI_RA007_Epitope_Rep4 906.5538532363399 906.55274993586 29.885 2 0.15148082307693184 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 103624 15977 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.59957490379 66.447 3 0.1514790217792128 0.0009400179051029543 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 73610 21797 NGFPVFATV True PC9_epitope_Rep3 950.48616759934 950.48506993586 89.14 2 0.15147695952533521 0.0009400179051029543 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 93930 17209 RVLDELTLA True PC9_epitope_Rep4 1028.5866099165999 1028.58550993586 74.203 2 0.15146977311259927 0.0009400179051029543 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 74142 12892 NHYNMQYAL True PC9_epitope_Rep4 1152.50222866964 1152.50112993586 57.468 2 0.15146934541792847 0.0009400179051029543 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2'] 109636 13450 THDITTISI True PC9_epitope_Rep6 999.52367530687 999.52256993586 63.427 2 0.15146674278268635 0.0009400179051029543 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 106906 19733 SYIQQINNL True PC9_epitope_Rep5 1091.56112344475 1091.56002993586 80.949 2 0.1514593776460028 0.0009400179051029543 0.9438714419765777 ['ENSG00000108395|ENST00000262294|TRIM37', 'nc|ENSG00000108395|O94972-3|TRIM37', 'nc|ENSG00000108395|O94972-2|TRIM37'] 25891 16590 FGIDRPAEL True PC9_epitope_Rep5 1016.5290950404799 1016.52798993586 68.819 2 0.15145299457365774 0.0009400179051029543 0.9438714419765777 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 6304 5596 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 26.913 2 0.15145247397123282 0.0009400179051029543 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 70819 12295 MEENPGIFA True H1975_Epitope_Rep2 1006.4429824580199 1006.44188993586 52.376 2 0.15145108939644808 0.0009400179051029543 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1'] 102564 17751 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51234993586 73.076 2 0.15144929228710272 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 137410 19345 YLLPAIVHI True PC9_epitope_Rep6 1037.62735252977 1037.6262499358602 87.06 2 0.15144826716944046 0.0009400179051029543 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 98939 12805 SIYNGDMEKI True PC9_epitope_Rep6 1168.5434247752798 1168.5423299358602 60.756 2 0.15142811187922736 0.0009400179051029543 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 18364 19822 EIYKEFFEV True PC9_epitope_Rep4 1202.58594121026 1202.5848499358601 84.374 2 0.15142134514494116 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 13886 7588 DRDPASGTAL True PC9_epitope_Rep3 1001.47778774361 1001.47668993586 34.185 2 0.15141658955182544 0.0009400179051029543 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 132528 19391 VYPGDPLRF True PC9_epitope_Rep1 1062.5498304850598 1062.5487299358601 79.399 2 0.15141434357241781 0.0009400179051029543 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 94366 15767 RYALQMEQL True PC9_epitope_Rep4 1150.5804789903398 1150.57938993586 68.57 2 0.1513968318690324 0.0009400179051029543 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 32658 4895 GHLENNPALEK True PC9_epitope_Rep5 1220.6149499227597 1220.61331490379 23.868 3 0.1513960403103123 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 32635 15328 GHFPSPIRL True PC9_epitope_Rep5 1022.5661492555399 1022.56504993586 63.97 2 0.15139366579325517 0.0009400179051029543 0.9438714419765777 ['ENSG00000062822|ENST00000440232|POLD1'] 110522 3998 TIQSGEQPYK True NCI_RA007_Epitope_Rep3 1149.56660274801 1149.56550993586 22.144 2 0.1513927144038122 0.0009400179051029543 0.9438714419765777 ['ENSG00000168653|ENST00000372969|NDUFS5'] 119132 7607 VEILANDQGNR True PC9_epitope_Rep5 1227.6207635791898 1227.6196699358602 34.209 2 0.15138857118241755 0.0009400179051029543 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 22987 15508 EVIKELAQI True PC9_epitope_Rep6 1041.6070110080097 1041.6059099358602 71.829 2 0.15138615103662384 0.0009400179051029543 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 90599 6516 RKISNNITL True NCI_RA007_Epitope_Rep2 1057.62439240765 1057.6232899358602 29.956 2 0.15138072211362494 0.0009400179051029543 0.9438714419765777 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 4046 19192 AHMDIFQNL True PC9_epitope_Rep4 1087.5120650773501 1087.5109699358602 81.921 2 0.15137898051880264 0.0009400179051029543 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1'] 77208 12081 NYIDKVRFL True NCI_RA007_Epitope_Rep2 1166.64479349906 1166.64368993586 51.586 2 0.1513781929939446 0.0009400179051029543 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 74427 18790 NIVNSIVGV True PC9_epitope_Rep6 913.5232813840499 913.52218993586 84.917 2 0.15137319467830596 0.0009400179051029543 0.9438714419765777 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10', 'SLC38A10|p.V758Cfs*76|1|0.35|ENSG00000157637|chr17:81246644-81246644|C/-|frameshift_variant'] 134908 7180 YADPVNAHY True H1975_Epitope_Rep1 1048.46140940348 1048.46030993586 32.638 2 0.15136850848303307 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 104039 19122 SRSWLSYSY True PC9_epitope_Rep1 1147.5298233164701 1147.5287299358602 78.343 2 0.1513653878148153 0.0009400179051029543 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3'] 108395 5885 TEEAAVAIKA True H1975_Epitope_Rep1 1001.5393253710098 1001.53822993586 27.706 2 0.15135001806148882 0.0009400179051029543 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 96411 7401 SEIDMSVKA True H1975_Epitope_Rep2 978.46919720586 978.46808993586 33.41 2 0.15134935649258216 0.0009400179051029543 0.9438714419765777 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 3870 16178 AHDDAIWSV True PC9_epitope_Rep2 1012.46140940348 1012.46030993586 67.481 2 0.1513486006890698 0.0009400179051029543 0.9438714419765777 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 105458 17135 SVASELEKI True PC9_epitope_Rep5 974.5284263341399 974.5273299358599 70.931 2 0.1513481022686876 0.0009400179051029543 0.9438714419765777 ['ENSG00000172244|ENST00000306862|C5orf34'] 36051 10016 GVDVTGPHLY True H1975_Epitope_Rep2 1056.52400966004 1056.52290993586 43.518 2 0.1513416560239503 0.0009400179051029543 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 75564 20104 NQMDGFDTL True PC9_epitope_Rep5 1039.4280606698699 1039.4269699358601 82.378 2 0.15133847655807622 0.0009400179051029543 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 27780 21060 FQEEVVAVL True PC9_epitope_Rep5 1032.5491617787197 1032.5480699358602 86.067 2 0.15133788472230475 0.0009400179051029543 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4', 'nc|ENSG00000163918|P35249-2|RFC4', 'ENST00000494047.5_1_3:186509405-186522502:-|nuORF'] 6809 18480 AQGGVLPNI True PC9_epitope_Rep2 867.48141657207 867.48030993586 76.417 2 0.1513315136934605 0.0009400179051029543 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC8|p.A114T|1|0.22|ENSG00000277075|chr6:26217314-26217314|G/A|missense_variant', 'H2AC4|p.Q113K|1|0.39|ENSG00000278463|chr6:26033232-26033232|G/T|missense_variant', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 1859 10019 AEIETELQA True H1975_Epitope_Rep1 1002.4869554449798 1002.48584993586 43.474 2 0.15132846397453267 0.0009400179051029543 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A'] 86195 8079 QPTSVLDKATA True PC9_epitope_Rep2 1129.59790287629 1129.5968099358602 36.434 2 0.1513281142625723 0.0009400179051029543 0.9438714419765777 ['DEPP1|p.R149Kfs*6|1|0.44|ENSG00000165507|chr10:44977585-44977586|-/T|frameshift_variant', 'ENSG00000165507|ENST00000298295|DEPP1'] 27190 17473 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55750993586 72.502 2 0.15132668209768732 0.0009400179051029543 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 49248 13026 KGTAFVTLL True H1975_Epitope_Rep2 948.56441792004 948.56332993586 55.225 2 0.15132314153669985 0.0009400179051029543 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1'] 84019 5380 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47687496793 25.731 1 0.15131554656517682 0.0009400179051029543 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 75771 4746 NRAPNTAEL True PC9_epitope_Rep4 984.4988575413599 984.49776993586 24.817 2 0.15131212407617256 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 34957 17434 GQWYGPNTV True PC9_epitope_Rep1 1020.4664947839199 1020.46538993586 71.858 2 0.15130579969145166 0.0009400179051029543 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 9963 11982 AYSAKIALF True NCI_RA007_Epitope_Rep3 982.5487678558999 982.54766993586 54.252 2 0.15130342582014253 0.0009400179051029543 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF', 'DPYD|p.G194C|1|0.39|ENSG00000188641|chr1:97699451-97699451|C/A|missense_variant'] 100439 12963 SLPEELQKC True PC9_epitope_Rep3 1045.51139637101 1045.51028993586 54.887 2 0.1513008923548825 0.0009400179051029543 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 101994 9069 SPNSILKAA True PC9_epitope_Rep1 899.5076313199099 899.50652993586 39.735 2 0.15129476542372594 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK', 'TTK|p.A401Ffs*17|1|0.11|ENSG00000112742|chr6:80022416-80022416|G/TT|frameshift_variant'] 53649 15796 KWNPTAGVAF True PC9_epitope_Rep6 1089.56072952193 1089.5596299358601 73.015 2 0.15129344676082537 0.0009400179051029543 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 21677 13152 ERVPYGVSV True PC9_epitope_Rep5 1004.5290950404799 1004.52798993586 55.593 2 0.1512819328930689 0.0009400179051029543 0.9438714419765777 ['ENSG00000125898|ENST00000381941|FAM110A'] 37885 7339 HEAIETDIAA True H1975_Epitope_Rep2 1068.50875351872 1068.5076499358602 33.17 2 0.15128024298549114 0.0009400179051029543 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 43441 12221 IHSSETLTL True PC9_epitope_Rep1 999.52367530687 999.52256993586 51.867 2 0.1512790494014002 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 96851 4243 SESPKEPEQLR True NCI_RA007_Epitope_Rep1 1298.64664397386 1298.6449949037901 20.616 3 0.15127596560495693 0.0009400179051029543 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENST00000546565.1_1_12:93277549-93277891:+|nuORF'] 29374 14441 FVEPSRQFV True PC9_epitope_Rep1 1107.5712942056298 1107.57018993586 60.371 2 0.1512717864634448 0.0009400179051029543 0.9438714419765777 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 26770 18867 FLDPRPLTV True PC9_epitope_Rep3 1056.59678067748 1056.59568993586 77.795 2 0.1512702566550256 0.0009400179051029543 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 89066 9248 REELSNVLAA True H1975_Epitope_Rep1 1100.5825871653199 1100.5814899358602 40.484 2 0.1512691767079913 0.0009400179051029543 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 114797 12464 TTDDPALLY True H1975_Epitope_Rep1 1007.4811417885498 1007.48057496793 52.98 1 0.15126844900950276 0.0009400179051029543 0.9438714419765777 ['ENSG00000182749|ENST00000675840|PAQR7'] 113359 5786 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.54912993586 28.942 2 0.15125544605789792 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 102618 20334 SQATDFGEALV True PC9_epitope_Rep3 1136.5349682665599 1136.5338699358601 83.464 2 0.15125073973965397 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 23794 13501 EYLDDRNTF True PC9_epitope_Rep2 1171.51456717515 1171.51346993586 57.22 2 0.1512453887756954 0.0009400179051029543 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.H214R|4|0.56|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant', 'TP53|p.R213G|1|0.52|ENSG00000141510|chr17:7674894-7674894|G/C|missense_variant', 'TP53|p.R213L|1|0.15|ENSG00000141510|chr17:7674893-7674893|C/A|missense_variant'] 113688 9132 TRDETNYGI True PC9_epitope_Rep1 1067.4883524273098 1067.48724993586 39.978 2 0.1512363810443353 0.0009400179051029543 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 140200 14293 YVYPDERTAL True PC9_epitope_Rep5 1225.59790287629 1225.5968099358602 59.981 2 0.15123340714449351 0.0009400179051029543 0.9438714419765777 ['ENSG00000145391|ENST00000274031|SETD7'] 6301 5320 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 25.852 2 0.15122939360904555 0.0009400179051029543 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 36643 20394 GVLPNIQAV True PC9_epitope_Rep3 909.5283667644899 909.52726993586 83.696 2 0.1512264499998518 0.0009400179051029543 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 34503 8303 GQDVGRYQV True PC9_epitope_Rep3 1020.49885754136 1020.49776993586 36.91 2 0.15122438452095247 0.0009400179051029543 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 54120 10787 KYMPNVKVAVF True NCI_RA007_Epitope_Rep4 1294.7107648838999 1294.7096699358601 48.339 2 0.1512080134904396 0.0009400179051029543 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 114053 13314 TRNDYVMMY True PC9_epitope_Rep6 1191.50526544475 1191.50416993586 62.869 2 0.1512075080431429 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 39670 9984 HPTEDLVVSA True PC9_epitope_Rep2 1066.5294889632999 1066.52838993586 43.733 2 0.1512074217570798 0.0009400179051029543 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 104611 8405 SSVATITRL True H1975_Epitope_Rep3 946.54474510462 946.54364993586 37.314 2 0.15120180950776527 0.0009400179051029543 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 48910 10057 KEVFLAQPV True NCI_RA007_Epitope_Rep1 1029.5858816406096 1029.58478993586 43.127 2 0.15120003797781847 0.0009400179051029543 0.9438714419765777 ['ENST00000376007.8_1_6:31588511-31590634:+|nuORF'] 118210 16621 VAYEAPSL True PC9_epitope_Rep5 848.4279840168799 848.42743496793 68.938 1 0.151190575187909 0.0009400179051029543 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 20616 9783 EQEVNILK True PC9_epitope_Rep1 971.5287606873098 971.52766993586 42.492 2 0.15117369422682617 0.0009400179051029543 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 83729 10714 QEASEAYLV True H1975_Epitope_Rep2 1008.4763907612797 1008.47587496793 46.236 1 0.1511645718916016 0.0009400179051029543 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'H3C13|p.G103R|1|0.12|ENSG00000183598|chr1:149813375-149813375|C/G|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 104082 16078 SRVDDVYSVL True PC9_epitope_Rep6 1151.58225281215 1151.5811499358601 74.172 2 0.15116180217858713 0.0009400179051029543 0.9438714419765777 ['ENST00000464255.1_1_2:219265892-219269145:+|nuORF', 'nc|ENSG00000144579|Q9GZU7-3|CTDSP1', 'nc|ENSG00000144579|Q9GZU7-2|CTDSP1', 'ENSG00000144579|ENST00000273062|CTDSP1'] 103845 15657 SRIPFNQAL True PC9_epitope_Rep1 1044.5716285588 1044.5705299358601 65.044 2 0.15115933678395016 0.0009400179051029543 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303610-112303748:+|nuORF'] 113097 6857 TQADWQHRV True PC9_epitope_Rep3 1139.5472047161102 1139.54554490379 31.391 3 0.15115682151020915 0.0009400179051029543 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'HSD17B12-ALKBH3|1|fusion'] 4420 11411 AIVDKVPSV True PC9_epitope_Rep6 926.54368247546 926.54258993586 54.951 2 0.15114154031113025 0.0009400179051029543 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 13154 10549 DLSTIEPLK True H1975_Epitope_Rep1 1014.5597264624199 1014.55862993586 45.531 2 0.15113767027153474 0.0009400179051029543 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENSG00000139223|ENST00000266594|ANP32D', 'nc|ENSG00000248546|O43423|ANP32CP'] 96663 11126 SENPSVYVP True NCI_RA007_Epitope_Rep1 990.4658260775799 990.4652749679301 47.278 1 0.151134353476273 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 129415 5783 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.52347496793 27.271 1 0.1511321553498626 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 40139 10819 HRDSGILGL True PC9_epitope_Rep6 966.5246783663799 966.52358993586 52.462 2 0.15113032144027252 0.0009400179051029543 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 74017 7640 NHSADFETV True PC9_epitope_Rep2 1018.43558857846 1018.43448993586 34.756 2 0.1511252922263415 0.0009400179051029543 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 4252 23395 AIIEYMPLL True PC9_epitope_Rep3 1061.5831047592899 1061.58200993586 95.27 2 0.15110907889934905 0.0009400179051029543 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 113974 14163 TRLEFQQQL True PC9_epitope_Rep2 1161.61422164677 1161.6131299358601 59.747 2 0.15110123709251297 0.0009400179051029543 0.9438714419765777 ['ENSG00000171159|ENST00000372994|BBLN'] 35822 17122 GTYTGFIKV True PC9_epitope_Rep5 984.5280324113198 984.52692993586 70.88 2 0.15109916032573675 0.0009400179051029543 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 14548 12505 DVDPETLSY True H1975_Epitope_Rep2 1037.45532096353 1037.45477496793 53.192 1 0.15109810773409835 0.0009400179051029543 0.9438714419765777 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 138461 20294 YRFLIQNVL True PC9_epitope_Rep4 1164.6655289436399 1164.6644299358602 86.204 2 0.15109557729805104 0.0009400179051029543 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000472894.1_1_9:95018893-95021273:-|nuORF'] 95982 12261 SEAEIFYNA True H1975_Epitope_Rep2 1042.46074069714 1042.4596499358602 52.246 2 0.15109379290467523 0.0009400179051029543 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 106802 19806 SYGKINILL True PC9_epitope_Rep3 1019.60153170475 1019.60042993586 81.416 2 0.1510934574275818 0.0009400179051029543 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant'] 77278 13427 NYISGIQTI True NCI_RA007_Epitope_Rep5 1007.52876068731 1007.52766993586 58.333 2 0.15109104985050986 0.0009400179051029543 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 42773 20752 IFGVTTLDIVR True PC9_epitope_Rep2 1232.71287305888 1232.71176993586 85.263 2 0.15109046924953495 0.0009400179051029543 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 26738 19632 FLDGNELTL True PC9_epitope_Rep6 1020.51277627 1020.51166993586 88.174 2 0.15108397091110626 0.0009400179051029543 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 27692 9360 FQDGTKATF True PC9_epitope_Rep1 1013.4818104948899 1013.48070993586 40.861 2 0.15108252417727014 0.0009400179051029543 0.9438714419765777 ['ENSG00000110711|ENST00000279146|AIP'] 97610 11143 SHAELETAL True PC9_epitope_Rep3 969.47672511445 969.47562993586 47.86 2 0.1510725778846776 0.0009400179051029543 0.9438714419765777 ['GPC1|p.P538Rfs*15|1|0.17|ENSG00000063660|chr2:240466222-240466222|C/-|frameshift_variant', 'ENSG00000063660|ENST00000264039|GPC1', 'nc|ENSG00000063660|P35052-2|GPC1', 'ENST00000469694.5_1_2:241381745-241403123:+|nuORF'] 28424 9527 FSEEGAVGY True H1975_Epitope_Rep1 957.4079768482898 957.4074249679301 41.569 1 0.1510711815302453 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 74671 23324 NLIDLDDLYV True PC9_epitope_Rep2 1191.6023195503901 1191.6012299358601 95.189 2 0.15107025070233746 0.0009400179051029543 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 40059 16270 HQYDGLVEL True PC9_epitope_Rep4 1072.5189242795998 1072.5178299358602 70.537 2 0.15106488823337147 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 129279 4774 VTDRDIDRY True H1975_Epitope_Rep2 1151.55710069347 1151.55544490379 23.452 3 0.15106438629340968 0.0009400179051029543 0.9438714419765777 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 28318 12994 FRYTAGTPY True PC9_epitope_Rep3 1074.5134449763398 1074.5123499358601 55.009 2 0.1510594939876707 0.0009400179051029543 0.9438714419765777 ['ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 56535 10320 LDVEIATYR True H1975_Epitope_Rep1 1078.56587447202 1078.56476993586 44.643 2 0.15105157859923993 0.0009400179051029543 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000170423|ENST00000304620|KRT78', 'CON__Q8N1N4-2', 'CON__Q7RTT2', 'CON__REFSEQ:XP_932229', 'nc|ENSG00000170423|Q8N1N4-2|KRT78', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF', 'CON__Q3TTY5', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'CON__Q922U2'] 106962 21508 SYLDSVHFF True PC9_epitope_Rep5 1113.51311062317 1113.51200993586 87.766 2 0.15105153275663893 0.0009400179051029543 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 134414 16142 WTDINVVVY True H1975_Epitope_Rep2 1107.5600608155898 1107.5589699358602 67.302 2 0.1510508444310633 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'CHD9|p.W1426Mfs*3|1|0.15|ENSG00000177200|chr16:53263047-53263048|-/A|frameshift_variant', 'ENST00000569225.5_1_16:53269177-53281416:+|nuORF'] 14069 10814 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep3 1086.45394144498 1086.45284993586 46.675 2 0.1510495205834586 0.0009400179051029543 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 3930 6912 AHDQNSNLL True PC9_epitope_Rep3 1010.47812209678 1010.47702993586 31.6 2 0.15104922257317752 0.0009400179051029543 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF'] 95053 8875 RYSEYAEEF True NCI_RA007_Epitope_Rep3 1192.5036681382796 1192.50256993586 42.001 2 0.15104317487129573 0.0009400179051029543 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 17336 4681 EHDPVGQM[Oxidation]V True PC9_epitope_Rep4 1026.4440454676198 1026.44294993586 24.539 2 0.15103939572922856 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 28082 7575 FRDQNPEQL True PC9_epitope_Rep6 1145.5465360097699 1145.54542993586 38.411 2 0.15103892244276154 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 118628 4153 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 21.073 2 0.15103452012634289 0.0009400179051029543 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 123420 11671 VIDSAELQAY True H1975_Epitope_Rep3 1107.54480467427 1107.54427496793 50.028 1 0.1510257304766408 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 38790 7220 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.54013490379 33.16 3 0.15102010099204843 0.0009400179051029543 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 94566 13819 RYIPTAAAF True PC9_epitope_Rep4 1008.5392658013599 1008.53816993586 61.051 2 0.15101956817130122 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 87883 20224 QVLPHLLEV True PC9_epitope_Rep3 1046.6124307416198 1046.61132993586 83.052 2 0.15101824880929185 0.0009400179051029543 0.9438714419765777 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 117151 13100 TYSPALNKM[Oxidation]F True PC9_epitope_Rep5 1186.5692459807399 1186.5681499358602 55.393 2 0.1510167294472196 0.0009400179051029543 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 2816 12416 AEVFPPPVA True H1975_Epitope_Rep2 925.4909186266098 925.48982993586 52.843 2 0.1510114269529932 0.0009400179051029543 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 118886 5634 VEEPENPAA True H1975_Epitope_Rep3 954.4294405688598 954.4288949679301 26.708 1 0.15100733170164907 0.0009400179051029543 0.9438714419765777 ['ENSG00000171316|ENST00000423902|CHD7'] 40389 15818 HRTEMDWVL True PC9_epitope_Rep4 1185.5600778989299 1185.55843490379 68.769 3 0.1510055739410691 0.0009400179051029543 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 106138 17282 SVPDPELIKTV True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 71.292 2 0.15100377183307787 0.0009400179051029543 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 53681 5129 KYADLSHNRL True NCI_RA007_Epitope_Rep4 1215.6360197205101 1215.6343649037901 26.245 3 0.15100100703630895 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000113643|P54136-2|RARS1', 'ENSG00000113643|ENST00000231572|RARS1', 'MAT2B-RARS|1|fusion', 'MAT2B-RARS|2|fusion'] 83712 5562 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 26.438 2 0.1510002189458432 0.0009400179051029543 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 7656 3260 ASMPDNTAAQK True NCI_RA007_Epitope_Rep4 1132.5182726566002 1132.51716993586 18.201 2 0.15099291934681966 0.0009400179051029543 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 39963 12552 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5445349679301 53.589 1 0.1509915961004279 0.0009400179051029543 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 70395 23034 LYQFNPAFF True PC9_epitope_Rep1 1145.5545815123298 1145.5540749679299 93.4 1 0.15098579557677944 0.0009400179051029543 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 71855 8704 M[Oxidation]PGFAPLTSR True H1975_Epitope_Rep3 1091.54336558607 1091.54226993586 38.479 2 0.15098413687791407 0.0009400179051029543 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000450755.1_1_X:122696050-122696458:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 32895 21408 GIMDRFLQV True PC9_epitope_Rep5 1077.5641006502099 1077.56300993586 87.41 2 0.15098150955531778 0.0009400179051029543 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 101902 12315 SPLLLQAKA True PC9_epitope_Rep1 939.5753169569099 939.57420993586 52.225 2 0.15096690243495223 0.0009400179051029543 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 17557 12322 EHITSEYTL True PC9_epitope_Rep2 1091.5135045459901 1091.5124099358602 52.708 2 0.1509665697985875 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000179094|O15534-4|PER1', 'ENSG00000179094|ENST00000317276|PER1', 'ENST00000579065.1_1_17:8052750-8054072:-|nuORF'] 53835 14847 KYGIVQEFF True NCI_RA007_Epitope_Rep5 1129.58079626017 1129.5796899358602 63.78 2 0.15096315909943897 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000149639|O94964-1|MTCL2', 'ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-3|MTCL2'] 83122 18367 PYPPPPPEF True PC9_epitope_Rep4 1039.5014833103098 1039.50038993586 78.714 2 0.1509619698974982 0.0009400179051029543 0.9438714419765777 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 47226 18062 IYDPNLAFLRF True NCI_RA007_Epitope_Rep2 1367.7237720957498 1367.72266993586 75.012 2 0.15096120927297513 0.0009400179051029543 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 91851 8490 RPNPPPVSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 37.492 2 0.15095845453190648 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 27286 24344 FLYPFPLAL True PC9_epitope_Rep3 1079.60555445603 1079.6044499358602 98.952 2 0.15095761170582134 0.0009400179051029543 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 7528 8231 ASETLQSPGY True H1975_Epitope_Rep3 1051.48220441771 1051.4816749679298 36.644 1 0.15094265073238325 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'PKMYT1|p.F483Lfs*14|1|0.54|ENSG00000127564|chr16:2973004-2973004|A/-|frameshift_variant', 'ENSG00000127564|ENST00000262300|PKMYT1'] 20999 6689 ERAPGETAL True PC9_epitope_Rep3 942.4770594676199 942.47596993586 30.753 2 0.1509385792146486 0.0009400179051029543 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 139893 10406 YVEDPQGNTIY True H1975_Epitope_Rep3 1297.58264673497 1297.58154993586 45.084 2 0.1509356398032835 0.0009400179051029543 0.9438714419765777 ['ENSG00000166557|ENST00000299705|TMED3', 'nc|ENSG00000166557|Q9Y3Q3-2|TMED3'] 67442 5330 LTEAPLNPK True NCI_RA007_Epitope_Rep5 981.5494961318899 981.54838993586 27.195 2 0.1509311798284548 0.0009400179051029543 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 94616 14227 RYLDEINLL True NCI_RA007_Epitope_Rep3 1147.62372370131 1147.62262993586 63.272 2 0.1509258121848371 0.0009400179051029543 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 135530 7590 YEEDSYSHIM[Oxidation]A True H1975_Epitope_Rep2 1359.52889729039 1359.52778993586 34.147 2 0.15092056922586525 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 7092 5800 AQYEDIANR True NCI_RA007_Epitope_Rep2 1078.5043368446197 1078.5032299358602 27.178 2 0.15091445482639165 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 28021 19246 FRADDTFEAL True PC9_epitope_Rep1 1183.55095268387 1183.54984993586 78.83 2 0.15091068558151718 0.0009400179051029543 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 43654 22476 IILPEDIEL True PC9_epitope_Rep2 1053.59577761797 1053.59468993586 91.943 2 0.15090499202764512 0.0009400179051029543 0.9438714419765777 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 76295 13567 NSDVSLLNY True H1975_Epitope_Rep2 1023.48728979815 1023.4861899358599 57.322 2 0.15090131510680904 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 47332 20212 IYGYVAEQF True PC9_epitope_Rep2 1088.5178616504397 1088.51727496793 83.163 1 0.15090037095456885 0.0009400179051029543 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 59880 6253 LHHDDPEVL True PC9_epitope_Rep2 1073.51417325233 1073.5130699358601 29.449 2 0.1508878465217392 0.0009400179051029543 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 47731 11832 IYQKAFEHL True PC9_epitope_Rep1 1147.6025943339098 1147.60093490379 50.377 3 0.15088222476656882 0.0009400179051029543 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 52681 11297 KQGDPIMTV True PC9_epitope_Rep1 987.5059170677499 987.50480993586 48.334 2 0.15088108025897454 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000168778|Q96GX1-2|TCTN2', 'ENSG00000168778|ENST00000303372|TCTN2'] 94600 18809 RYKLYQEMF True PC9_epitope_Rep3 1276.6274291827597 1276.62577490379 77.574 3 0.1508795620249359 0.0009400179051029543 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 40588 7275 HTDGNNIYV True PC9_epitope_Rep2 1031.4672230599099 1031.4661299358602 33.371 2 0.15087787330353894 0.0009400179051029543 0.9438714419765777 ['ENSG00000048405|ENST00000265827|ZNF800'] 34954 17007 GQWVGTVLL True NCI_RA007_Epitope_Rep4 971.5440168286299 971.54346496793 73.698 1 0.1508753022947538 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF'] 44850 18532 IPYHIVNIV True PC9_epitope_Rep4 1066.6175161220601 1066.61640993586 79.358 2 0.1508725508956211 0.0009400179051029543 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 131813 18845 VYAPPVGGF True PC9_epitope_Rep4 905.4647038787698 905.46360993586 80.575 2 0.15086629647226626 0.0009400179051029543 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 31577 9841 GEFSITYKP True NCI_RA007_Epitope_Rep3 1040.5178616504397 1040.51676993586 45.782 2 0.15085730500340397 0.0009400179051029543 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 37304 12910 GVVPTIQKV True PC9_epitope_Rep1 939.5753169569098 939.57420993586 54.531 2 0.15085079075066926 0.0009400179051029543 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 46976 4946 IVNTNVPR True NCI_RA007_Epitope_Rep2 911.51886470995 911.51776993586 23.859 2 0.1508502446636234 0.0009400179051029543 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 109766 12909 THISDTSVVL True PC9_epitope_Rep2 1070.56078909158 1070.5596899358602 54.951 2 0.15083648783074483 0.0009400179051029543 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 104765 4490 STDPAAPNLK True NCI_RA007_Epitope_Rep3 1012.5189242796 1012.51782993586 24.49 2 0.150835814850709 0.0009400179051029543 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 60482 10039 LILYYQGRS True NCI_RA007_Epitope_Rep5 1111.60259433391 1111.6014899358602 45.254 2 0.15083565945864014 0.0009400179051029543 0.9438714419765777 ['chr8:47971468-47972891|126|16.67|0.35|5.59|+|2|MCM4,None|1'] 96045 5306 SEAPGQRALP True H1975_Epitope_Rep3 1024.5301576696397 1024.5290699358602 25.487 2 0.15083502674288568 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 130686 14521 VVDEIFNEY True H1975_Epitope_Rep3 1126.51825557326 1126.51767496793 61.218 1 0.1508342618025385 0.0009400179051029543 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 43285 16155 IHDNGEFYL True PC9_epitope_Rep2 1106.50327421546 1106.5021699358601 67.395 2 0.15083157870551736 0.0009400179051029543 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 2462 8821 AEQNTQITSI True H1975_Epitope_Rep3 1103.54586730343 1103.5447699358601 38.937 2 0.1508303737235318 0.0009400179051029543 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 45360 5356 ISDHGTVTY True H1975_Epitope_Rep3 991.46107505031 991.45996993586 25.668 2 0.15082963131163804 0.0009400179051029543 0.9438714419765777 ['ENSG00000005893|ENST00000200639|LAMP2', 'nc|ENSG00000005893|P13473-2|LAMP2', 'nc|ENSG00000005893|P13473-3|LAMP2'] 11753 19890 DHIEELVSL True PC9_epitope_Rep2 1053.53423999057 1053.5331499358601 81.901 2 0.15082847354280524 0.0009400179051029543 0.9438714419765777 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 75386 14219 NQDTHLLYV True PC9_epitope_Rep4 1101.54547338061 1101.54436993586 62.601 2 0.1507954858542295 0.0009400179051029543 0.9438714419765777 ['ENSG00000182179|ENST00000333486|UBA7'] 116791 15475 TYLPTSPLL True NCI_RA007_Epitope_Rep3 1003.55899818643 1003.55847496793 68.427 1 0.1507897066570301 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 128378 9459 VSDRVTVLY True H1975_Epitope_Rep2 1050.57095985246 1050.5698699358602 41.352 2 0.15078925956969186 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 74425 19943 NIVNSIVGV True PC9_epitope_Rep4 913.5232813840499 913.52218993586 84.846 2 0.15077827265631247 0.0009400179051029543 0.9438714419765777 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10', 'SLC38A10|p.V758Cfs*76|1|0.35|ENSG00000157637|chr17:81246644-81246644|C/-|frameshift_variant'] 115430 20228 TVFDEAIRAV True PC9_epitope_Rep5 1119.59242357303 1119.5913299358601 82.854 2 0.1507762460580208 0.0009400179051029543 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 31585 10296 GEFSITYKP True NCI_RA007_Epitope_Rep5 1040.5178616504397 1040.51676993586 46.235 2 0.15077022267152732 0.0009400179051029543 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 103728 13448 SREPSQVIF True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 56.586 2 0.15076976455851562 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 108342 4422 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 22.117 2 0.15075938368828593 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 86673 11490 QRIAEENIM True PC9_epitope_Rep5 1102.54409348162 1102.54298993586 49.193 2 0.1507541862995952 0.0009400179051029543 0.9438714419765777 ['ENSG00000071859|ENST00000393600|FAM50A', 'ENST00000481619.5_1_X:153672624-153677371:+|nuORF'] 14665 21920 DVNFEFPEFQL True NCI_RA007_Epitope_Rep5 1383.63468230783 1383.63358993586 91.448 2 0.15074910670685396 0.0009400179051029543 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 138581 18567 YRPPELLL True PC9_epitope_Rep4 999.5753169569099 999.57420993586 79.495 2 0.15074730606094852 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 6117 9002 APNLQNQQV True PC9_epitope_Rep2 1010.5145076055 1010.51340993586 39.978 2 0.15073406090784952 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 35073 14755 GRHGVFLEL True PC9_epitope_Rep2 1026.5610638750998 1026.5599699358602 62.021 2 0.15072700473650946 0.0009400179051029543 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 89707 11006 REYPNLVTI True NCI_RA007_Epitope_Rep3 1103.59750895347 1103.59640993586 50.383 2 0.15072616261431615 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110'] 136673 3828 YIDSNNNPER True NCI_RA007_Epitope_Rep2 1220.54217890532 1220.54108993586 19.525 2 0.15072431497232527 0.0009400179051029543 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC|p.I882V|1|0.16|ENSG00000141367|chr17:59677036-59677036|A/G|missense_variant', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 135630 8321 YEEQPGLQP True H1975_Epitope_Rep3 1059.4872897981497 1059.48618993586 36.989 2 0.15072103019529676 0.0009400179051029543 0.9438714419765777 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 34565 9698 GQFQGRPVSV True PC9_epitope_Rep3 1073.5617921510898 1073.5606899358602 42.255 2 0.15072041537612801 0.0009400179051029543 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 29294 18629 FVDPAQITM True PC9_epitope_Rep6 1020.49501803088 1020.49392993586 84.299 2 0.15071856820042956 0.0009400179051029543 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 126835 4981 VPSYPSKSA True PC9_epitope_Rep5 934.47599683846 934.47488993586 24.193 2 0.1507154648962008 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 102955 12006 SQIPAQPSV True PC9_epitope_Rep5 925.48689587533 925.48578993586 51.175 2 0.1507145050554476 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 7526 8227 ASETLQSPGY True H1975_Epitope_Rep2 1051.48220441771 1051.48110993586 36.596 2 0.15071275715521767 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'PKMYT1|p.F483Lfs*14|1|0.54|ENSG00000127564|chr16:2973004-2973004|A/-|frameshift_variant', 'ENSG00000127564|ENST00000262300|PKMYT1'] 98937 13604 SIYNGDMEKI True PC9_epitope_Rep4 1168.5434247752798 1168.5423299358602 60.222 2 0.1507108906404826 0.0009400179051029543 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 2024 7727 AELATRALP True NCI_RA007_Epitope_Rep4 940.5341804209199 940.53308993586 36.394 2 0.15070980732463335 0.0009400179051029543 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 25583 7077 FESSGIHVA True H1975_Epitope_Rep2 945.45559574705 945.45504496793 32.152 1 0.15070172289439318 0.0009400179051029543 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 49485 11660 KIYEGQVEV True PC9_epitope_Rep5 1063.55497543515 1063.5538699358601 49.846 2 0.15070019081309163 0.0009400179051029543 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 28800 16760 FTDESYLELY True H1975_Epitope_Rep1 1278.5655996885 1278.5650749679298 69.867 1 0.15069786886029943 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 95314 7569 SAFGQAFSK True NCI_RA007_Epitope_Rep4 941.4606811274899 941.45958993586 35.762 2 0.150696165405988 0.0009400179051029543 0.9438714419765777 ['ENSG00000129696|ENST00000431156|TTI2'] 126841 13910 VPTANVSVVDL True H1975_Epitope_Rep1 1112.607739284 1112.60664993586 58.658 2 0.1506938796172427 0.0009400179051029543 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 107720 15260 TALLKIEGV True PC9_epitope_Rep6 942.57498260374 942.5744349679301 70.808 1 0.1506929630611168 0.0009400179051029543 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 27632 21344 FQAEIAQLM True PC9_epitope_Rep3 1049.52156713189 1049.52097496793 87.397 1 0.1506838416458373 0.0009400179051029543 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 41161 20871 HYSPIYLSF True PC9_epitope_Rep1 1125.5494961318898 1125.54838993586 85.106 2 0.15066906164274624 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 113156 19870 TQDAVPLTL True PC9_epitope_Rep2 956.51786165044 956.51731496793 81.824 1 0.15066240934510208 0.0009400179051029543 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 5071 19768 ALLPELREV True PC9_epitope_Rep3 1038.6073453611798 1038.6062499358602 81.266 2 0.15065851249526235 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000170175|P11230-2|CHRNB1', 'ENSG00000170175|ENST00000306071|CHRNB1'] 108092 14708 TDLLLEPYNK True PC9_epitope_Rep6 1204.6339540318397 1204.6328499358601 68.52 2 0.15065767011949427 0.0009400179051029543 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 54323 10778 KYQAVTATL True PC9_epitope_Rep1 993.5494961318899 993.54838993586 46.345 2 0.150641608729105 0.0009400179051029543 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'ENST00000478813.1_1_8:81177882-81177960:-|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 108437 5521 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 26.246 2 0.1506374364979831 0.0009400179051029543 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 46193 16759 ITDIQIPLDY True H1975_Epitope_Rep1 1189.6230549949698 1189.62247496793 69.863 1 0.1506367398164662 0.0009400179051029543 0.9438714419765777 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 8931 9076 AVGLVLPAK True NCI_RA007_Epitope_Rep4 866.5589386167799 866.55784993586 41.745 2 0.1506355546511839 0.0009400179051029543 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 113312 16360 TQILSVPKV True PC9_epitope_Rep1 983.6015317047498 983.60042993586 67.749 2 0.15063332641742339 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 7815 6667 ATADLALGR True NCI_RA007_Epitope_Rep4 886.4872302284999 886.48612993586 32.266 2 0.150630714468414 0.0009400179051029543 0.9438714419765777 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160056-49160527:-|nuORF'] 87858 21821 QVLEDFPTI True PC9_epitope_Rep1 1060.54407639828 1060.54357496793 88.743 1 0.150625273125851 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 14545 14611 DVDLEFLAK True NCI_RA007_Epitope_Rep1 1048.54407639828 1048.5429699358601 60.885 2 0.15062502246412202 0.0009400179051029543 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF'] 1355 5770 AEEEAATRIPA True H1975_Epitope_Rep3 1156.57241640444 1156.5713099358602 27.221 2 0.15062455828623778 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF'] 34523 6528 GQEDHYNNL True PC9_epitope_Rep3 1088.45230127176 1088.45120993586 30.137 2 0.15062112122362045 0.0009400179051029543 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 73802 10994 NHDTGEYVL True PC9_epitope_Rep1 1046.46688870674 1046.4657899358601 47.177 2 0.15062082990277437 0.0009400179051029543 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 53220 9826 KTDLDLDGY True H1975_Epitope_Rep3 1038.48695544498 1038.4858499358602 42.822 2 0.15062027409882528 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'EPS15L1|p.F303Lfs*11|1|0.25|ENSG00000127527|chr19:16421360-16421360|G/-|frameshift_variant', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1'] 73992 5157 NHQGGSVQL True PC9_epitope_Rep3 938.4569927293799 938.45588993586 24.92 2 0.15061927973086955 0.0009400179051029543 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 106820 13141 SYHPALNAI True PC9_epitope_Rep5 984.5028802926399 984.50178993586 55.55 2 0.15061761488474706 0.0009400179051029543 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.C777*|1|0.3|ENSG00000115760|chr2:32415620-32415621|TG/-|frameshift_variant', 'BIRC6-YIPF4|1|fusion'] 139630 12623 YTSDHFETI True PC9_epitope_Rep1 1111.4822044177101 1111.48110993586 53.424 2 0.15061544429856447 0.0009400179051029543 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 104749 10983 STDLQDYTY True H1975_Epitope_Rep1 1104.46113461996 1104.4600299358601 47.212 2 0.15060923501315152 0.0009400179051029543 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 48374 8945 KEAIETIVAA True H1975_Epitope_Rep1 1043.5862755634298 1043.5857749679299 39.311 1 0.15060692529830272 0.0009400179051029543 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 29296 15289 FVDPLVTNY True H1975_Epitope_Rep1 1066.53351171458 1066.5324099358602 64.079 2 0.15059140779053032 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 96024 9691 SEALPSDIA True H1975_Epitope_Rep2 901.43927697657 901.43872496793 42.258 1 0.15058927229087288 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 107419 5180 SYTSGPGSRI True NCI_RA007_Epitope_Rep3 1023.49852318819 1023.4974299358599 27.367 2 0.15058652332840056 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 56959 4644 LEDVSKPPA True H1975_Epitope_Rep3 954.5022115863 954.50110993586 22.984 2 0.15058581591815665 0.0009400179051029543 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 64557 18439 LRDGQILEL True PC9_epitope_Rep5 1055.59750895347 1055.59640993586 75.948 2 0.15058413085731326 0.0009400179051029543 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 39526 18800 HPFDLGLYNEA True PC9_epitope_Rep4 1274.59315184902 1274.5920499358601 80.399 2 0.15057650332028039 0.0009400179051029543 0.9438714419765777 ['ENSG00000106399|ENST00000223129|RPA3'] 108796 6945 TEQEVAQVASA True H1975_Epitope_Rep2 1131.54078192299 1131.53968993586 31.633 2 0.15057057540431193 0.0009400179051029543 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 104366 21276 SSFPRFYFV True PC9_epitope_Rep3 1148.5654805492 1148.5643899358602 87.134 2 0.15056609949052255 0.0009400179051029543 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 3891 8126 AHDDGRWSL True PC9_epitope_Rep6 1055.47845644995 1055.47734993586 40.794 2 0.15056282145803215 0.0009400179051029543 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 131812 19790 VYAPPVGGF True PC9_epitope_Rep3 905.4647038787698 905.46360993586 81.352 2 0.15055502680204583 0.0009400179051029543 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 11016 11820 DDGLFSGD True H1975_Epitope_Rep1 824.31882749072 824.31827496793 50.46 1 0.1505458656171837 0.0009400179051029543 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 132154 10267 VYISEHEHF True PC9_epitope_Rep3 1159.5298233164701 1159.5281849037901 44.44 3 0.15054032456657943 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 42230 3826 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep2 1056.52738116876 1056.5262899358602 19.733 2 0.15054029734703767 0.0009400179051029543 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 87296 22019 QSVDLVFPV True PC9_epitope_Rep2 1002.5385970950199 1002.53807496793 90.167 1 0.15053971367121854 0.0009400179051029543 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 98521 16052 SILHDVVEV True PC9_epitope_Rep6 1009.54441075145 1009.54330993586 74.067 2 0.15053970921169782 0.0009400179051029543 0.9438714419765777 ['ENST00000572148.1_1_17:4863453-4863890:-|nuORF', 'ENSG00000091640|ENST00000206020|SPAG7'] 35665 5802 GTMTGM[Oxidation]LYK True NCI_RA007_Epitope_Rep3 1016.46708941132 1016.46598993586 29.799 2 0.15053547154206806 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 86350 19023 QQLDSKFLEQV True PC9_epitope_Rep1 1333.68778050985 1333.6866899358602 77.962 2 0.15053478709775586 0.0009400179051029543 0.9438714419765777 ['STAT1|p.D627Tfs*31|1|0.13|ENSG00000115415|chr2:190976999-190977020|AGGGTTCAACCGCATGGAAGTC/-|frameshift_variant', 'nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 102739 19100 SQDYPTLAF True PC9_epitope_Rep6 1040.48147614172 1040.4803699358602 86.118 2 0.15052695296703877 0.0009400179051029543 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 103625 15693 SRDKTIIMW True PC9_epitope_Rep5 1148.60121443492 1148.59957490379 65.371 3 0.15051602721012775 0.0009400179051029543 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 84917 13079 QHSVPLQL True PC9_epitope_Rep5 920.50796567308 920.50686993586 55.314 2 0.1505099307530647 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 67502 16118 LTELPDWSY True H1975_Epitope_Rep1 1122.5233409537 1122.52277496793 67.341 1 0.15050738349091636 0.0009400179051029543 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 38554 12634 HHFEGAQIL True PC9_epitope_Rep5 1050.5246783663797 1050.5235899358602 53.599 2 0.15050726993664507 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 113977 12727 TRLEFQQQL True PC9_epitope_Rep6 1161.61422164677 1161.6131299358601 60.441 2 0.1505065052865726 0.0009400179051029543 0.9438714419765777 ['ENSG00000171159|ENST00000372994|BBLN'] 97085 7322 SEYQQYQDATA True H1975_Epitope_Rep2 1302.53642481854 1302.53532993586 33.104 2 0.1505050756708639 0.0009400179051029543 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 98535 13405 SILPAIFQK True NCI_RA007_Epitope_Rep3 1015.6066170851899 1015.60552993586 60.008 2 0.15049916461555857 0.0009400179051029543 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 21583 4474 ERSGVNSEL True PC9_epitope_Rep4 989.47778774361 989.47668993586 23.677 2 0.15049858675164154 0.0009400179051029543 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 64593 8866 LREDSTVSL True PC9_epitope_Rep6 1018.5294889633 1018.52838993586 44.038 2 0.15049523197587975 0.0009400179051029543 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4'] 8481 9580 ATVAVPLVGK True NCI_RA007_Epitope_Rep2 953.5909670210499 953.58986993586 41.878 2 0.15049506489416142 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 29409 21505 FVFPGELLL True H1975_Epitope_Rep3 1033.5848190114498 1033.5837299358602 89.871 2 0.15049346770017644 0.0009400179051029543 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 75466 17459 NQIGAKFWEV True PC9_epitope_Rep6 1190.60840799034 1190.60730993586 79.778 2 0.15047534979950947 0.0009400179051029543 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 39695 8112 HPTWALKEA True PC9_epitope_Rep2 1051.5450794577898 1051.54398993586 36.561 2 0.1504721116076872 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 8625 7839 AVALPLQTK True NCI_RA007_Epitope_Rep3 939.57531695691 939.57420993586 37.957 2 0.15046509626987226 0.0009400179051029543 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 6698 9049 AQASDLEKI True PC9_epitope_Rep4 973.50802524273 973.50692993586 42.382 2 0.1504649102358718 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530666.1_1_11:764238-764842:+|nuORF'] 52735 20694 KQLEDILVL True PC9_epitope_Rep5 1069.63831113629 1069.63720993586 84.655 2 0.15046239203489434 0.0009400179051029543 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 86494 19444 QQYNSFVSL True PC9_epitope_Rep4 1084.5189242796 1084.5178299358602 82.904 2 0.15046209956149142 0.0009400179051029543 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 138016 21473 YQDEVFGGF True PC9_epitope_Rep1 1060.4501760134397 1060.44906993586 87.437 2 0.1504614908478937 0.0009400179051029543 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 104010 7905 SRSDSNFQV True PC9_epitope_Rep5 1038.47303671634 1038.47192993586 35.348 2 0.15046030952382078 0.0009400179051029543 0.9438714419765777 ['ENST00000505131.1_1_4:48384636-48389420:+|nuORF', 'ENSG00000109171|ENST00000264313|SLAIN2'] 113819 5015 TREATQAEI True PC9_epitope_Rep1 1017.5090878718897 1017.50798993586 24.149 2 0.1504565565033885 0.0009400179051029543 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 11960 17766 DHTAPLLL True PC9_epitope_Rep5 878.48616759934 878.48506993586 73.355 2 0.1504507519744967 0.0009400179051029543 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 63880 7986 LPVGAANFR True H1975_Epitope_Rep1 943.52395009039 943.52284993586 35.668 2 0.15044814413558152 0.0009400179051029543 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 103927 11268 SRPENAIIY True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 48.349 2 0.15044599223624158 0.0009400179051029543 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 2483 4074 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 20.796 2 0.15044521571253658 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 88902 6852 REAQSLISA True NCI_RA007_Epitope_Rep2 973.5192586327698 973.51816993586 31.269 2 0.1504435187426966 0.0009400179051029543 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 137463 20992 YLPDSLTQL True PC9_epitope_Rep2 1048.54407639828 1048.5429699358601 86.196 2 0.15043397723382596 0.0009400179051029543 0.9438714419765777 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 113805 6532 TRDSVKTVL True PC9_epitope_Rep5 1017.58185888933 1017.58076993586 30.098 2 0.15043055468905764 0.0009400179051029543 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 69273 15708 LVPEFVHNV True PC9_epitope_Rep4 1052.5654805492 1052.5643899358602 68.347 2 0.15042849080166468 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.M758Sfs*26|1|0.14|ENSG00000170921|chr17:63355299-63355303|GACAT/-|frameshift_variant'] 108303 5327 TEDDPQEVSA True H1975_Epitope_Rep2 1089.44621283181 1089.44567496793 25.543 1 0.15041787050962183 0.0009400179051029543 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 126504 13869 VPNKFLVTA True PC9_epitope_Rep3 987.5753169569099 987.57420993586 58.429 2 0.15041755702523812 0.0009400179051029543 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 34801 5619 GQTGVIRSV True PC9_epitope_Rep6 915.5137793295099 915.51268993586 29.689 2 0.15041427588906828 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 24008 12631 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep6 1300.57578791316 1300.57468993586 60.047 2 0.15041383636694527 0.0009400179051029543 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 28803 16875 FTDESYLELY True H1975_Epitope_Rep2 1278.5655996885 1278.5650749679298 70.155 1 0.15041378431561117 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 139870 18681 YVDPVITSI True PC9_epitope_Rep6 1005.53826274185 1005.53716993586 84.5 2 0.15041299172516576 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 135552 6498 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52897496793 29.911 1 0.150412444253594 0.0009400179051029543 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 100136 20562 SLLDIIEKV True PC9_epitope_Rep6 1028.61176203528 1028.6106699358602 91.82 2 0.15040798486722146 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 87376 6315 QTDKLKELY True H1975_Epitope_Rep3 1136.6077392839998 1136.60664993586 29.289 2 0.15040027603349485 0.0009400179051029543 0.9438714419765777 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72'] 102971 7495 SQIQEFKEA True PC9_epitope_Rep4 1078.5294889632999 1078.52838993586 36.192 2 0.15039991411638295 0.0009400179051029543 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 94734 16905 RYLGKVLEL True PC9_epitope_Rep5 1089.65462990677 1089.6535299358602 70.039 2 0.15038967843029669 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000573641.1_1_17:2598433-2598937:-|nuORF'] 75046 7657 NMEADPGQY True H1975_Epitope_Rep2 1023.3967605415899 1023.3956699358599 34.406 2 0.15038913282356153 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 130889 14374 VVHDGFEGL True PC9_epitope_Rep3 971.47124581119 971.47014993586 60.382 2 0.15038875246260416 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 76235 10704 NSATGVPTV True PC9_epitope_Rep2 844.42904664604 844.4279499358599 46.488 2 0.1503863976757357 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 32606 8316 GHDASQITL True PC9_epitope_Rep6 940.46140940348 940.46030993586 41.615 2 0.1503820541527264 0.0009400179051029543 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 7854 9039 ATALEYVYK True NCI_RA007_Epitope_Rep3 1056.54916177872 1056.5480699358602 42.648 2 0.15038202812982662 0.0009400179051029543 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 2868 13409 AEYIPLTPAAA True H1975_Epitope_Rep2 1115.58627556343 1115.5851699358602 56.713 2 0.15038059246980715 0.0009400179051029543 0.9438714419765777 ['ENSG00000101216|ENST00000370077|GMEB2'] 94390 8759 RYFDPANGKF True NCI_RA007_Epitope_Rep4 1213.5880068989297 1213.58635490379 40.489 3 0.15037626138360075 0.0009400179051029543 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 72916 16805 NAYTGIVLL True H1975_Epitope_Rep2 962.54368247546 962.5431349679301 69.889 1 0.1503726898060245 0.0009400179051029543 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 111618 5818 TLNQIDSVK True H1975_Epitope_Rep3 1016.5502244078799 1016.54912993586 27.403 2 0.15037231656779168 0.0009400179051029543 0.9438714419765777 ['CON__P12763'] 44095 12207 ILMEHIHKL True PC9_epitope_Rep3 1132.64268532408 1132.64104490379 51.985 3 0.15037106203286194 0.0009400179051029543 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 40001 17858 HQSGIVQLL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 73.709 2 0.15036835073964913 0.0009400179051029543 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 85050 19573 QILDGVHYL True PC9_epitope_Rep3 1056.5603951687601 1056.55928993586 80.522 2 0.1503648676763272 0.0009400179051029543 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 35240 6006 GSIDAITGK True NCI_RA007_Epitope_Rep4 860.46034677432 860.45924993586 29.721 2 0.15035668116577702 0.0009400179051029543 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 11920 13146 DHSGQVTIL True PC9_epitope_Rep3 968.49270953176 968.49160993586 55.597 2 0.15035191494303118 0.0009400179051029543 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 137109 15111 YLDDPTNSWY True H1975_Epitope_Rep1 1272.52988288612 1272.52937496793 63.378 1 0.15034986969266362 0.0009400179051029543 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 130805 2831 VVEVTHDLQK True NCI_RA007_Epitope_Rep1 1166.6295373577398 1166.62789490379 14.838 3 0.15034727713073923 0.0009400179051029543 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 56836 10689 LEDDKISLP True H1975_Epitope_Rep2 1028.5389910178399 1028.5378899358602 46.139 2 0.15033640299937073 0.0009400179051029543 0.9438714419765777 ['ENSG00000132017|ENST00000254337|DCAF15'] 137592 21556 YLTDLQVSL True PC9_epitope_Rep2 1050.55972646242 1050.55917496793 88.384 1 0.15033497931121462 0.0009400179051029543 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 140289 13743 YYDKHFTEF True PC9_epitope_Rep1 1248.54513902744 1248.5440499358601 57.707 2 0.15033455340919832 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 97032 15290 SEWDGIVTV True NCI_RA007_Epitope_Rep4 1004.4814761417199 1004.48097496793 66.466 1 0.15032449763306766 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 130546 19947 VTYGFPIML True H1975_Epitope_Rep1 1039.5412399473098 1039.54067496793 83.02 1 0.15032036221488254 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF'] 33187 11949 GKVQIPIM[Oxidation]L True NCI_RA007_Epitope_Rep3 1013.5943385297699 1013.59324993586 54.127 2 0.15031979595263648 0.0009400179051029543 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 95092 18232 RYSTGLAGNLL True PC9_epitope_Rep5 1163.6298717109098 1163.6287699358602 75.141 2 0.15031669987562032 0.0009400179051029543 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 113727 9057 TRDEVDATL True PC9_epitope_Rep5 1018.4931034545799 1018.49200993586 39.782 2 0.15031532230207886 0.0009400179051029543 0.9438714419765777 ['ENST00000521795.1_1_8:120865268-120868035:-|nuORF', 'ENSG00000136982|ENST00000313655|DSCC1'] 128318 10493 VSDFGGRSL True PC9_epitope_Rep1 936.46649478392 936.46538993586 45.251 2 0.15031101971167615 0.0009400179051029543 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 12637 7043 DLEGLSQR True NCI_RA007_Epitope_Rep2 916.46140940348 916.46030993586 32.019 2 0.15030959902850455 0.0009400179051029543 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 96156 5170 SEEEGVPST True H1975_Epitope_Rep2 933.39272070697 933.39217496793 24.962 1 0.150307089799336 0.0009400179051029543 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 44855 17513 IPYHIVNIV True PC9_epitope_Rep6 1066.6175161220601 1066.61640993586 79.993 2 0.15030326149685272 0.0009400179051029543 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 9147 19372 AVMKQFAFV True PC9_epitope_Rep5 1039.5524733373497 1039.55136993586 79.561 2 0.150303229645383 0.0009400179051029543 0.9438714419765777 ['nc|ENSG00000239306|Q96PK6-5|RBM14', 'nc|ENSG00000239306|Q96PK6-3|RBM14', 'nc|ENSG00000239306|Q96PK6-4|RBM14', 'ENST00000511114.1_1_11:66384104-66406046:+|nuORF', 'nc|ENSG00000239306|Q96PK6-2|RBM14', 'ENST00000512283.1_1_11:66384104-66384788:+|nuORF', 'RBM14|p.D163Tfs*68|2|0.19|ENSG00000239306|chr11:66624360-66624360|G/-|frameshift_variant', 'ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 24126 7146 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56954993586 32.5 2 0.15030309917959617 0.0009400179051029543 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 77025 21730 NVVEQFLQA True PC9_epitope_Rep1 1046.53965972418 1046.53856993586 88.415 2 0.15030079377290273 0.0009400179051029543 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25'] 97063 6066 SEYLQQHVA True NCI_RA007_Epitope_Rep4 1073.51417325233 1073.5130699358601 29.948 2 0.1503006509475743 0.0009400179051029543 0.9438714419765777 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 71137 19857 METVWTILP True H1975_Epitope_Rep2 1088.55761828744 1088.55707496793 82.364 1 0.15029804364793434 0.0009400179051029543 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 101536 14314 SPAPPLLHV True PC9_epitope_Rep4 929.53345214493 929.53234993586 62.962 2 0.15029666234805433 0.0009400179051029543 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 43044 11491 IGGIGTVPVGR True PC9_epitope_Rep4 1024.6029286870798 1024.60182993586 51.961 2 0.15029452207544403 0.0009400179051029543 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 136904 13895 YKDGTELEL True PC9_epitope_Rep1 1066.51825557326 1066.51714993586 58.284 2 0.1502925714360008 0.0009400179051029543 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 128192 13551 VRTPYTMSY True PC9_epitope_Rep3 1116.52738078832 1116.5262899358602 57.179 2 0.1502876469203119 0.0009400179051029543 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 47509 20298 IYLEVIHNL True PC9_epitope_Rep2 1112.6229954253201 1112.62188993586 83.498 2 0.15028328623948223 0.0009400179051029543 0.9438714419765777 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'ENST00000491074.5_1_2:183605037-183619453:+|nuORF', 'ENST00000418559.5_1_2:183605037-183617329:+|nuORF'] 34922 16996 GQWASVIRV True PC9_epitope_Rep4 1014.5610638750999 1014.55996993586 73.365 2 0.15028072479155108 0.0009400179051029543 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 6311 5483 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 26.166 2 0.15028021717960205 0.0009400179051029543 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 13869 20669 DRDDFPVVL True PC9_epitope_Rep5 1074.53457434374 1074.53346993586 84.558 2 0.15027630666647238 0.0009665231526227924 0.9438714419765777 ['ENSG00000126458|ENST00000246792|RRAS'] 94947 6500 RYPNKLDTI True NCI_RA007_Epitope_Rep4 1118.6084079903399 1118.60730993586 31.607 2 0.15027590326728224 0.0009665231526227924 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000513757.5_1_5:1479693-1494872:-|nuORF'] 19963 14967 EMDSPILGDY True H1975_Epitope_Rep2 1138.4852411928198 1138.4841499358602 62.723 2 0.15027390822877423 0.0009665231526227924 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 75125 17749 NMVDIIHSV True PC9_epitope_Rep6 1026.51681610462 1026.51570993586 80.906 2 0.15027063012427114 0.0009665231526227924 0.9438714419765777 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 53276 19589 KTIEDTLMTV True PC9_epitope_Rep3 1149.59512599497 1149.5940299358601 80.586 2 0.15025623383748615 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 137057 16461 YLADIFTKL True H1975_Epitope_Rep2 1082.6011973515801 1082.60010993586 68.535 2 0.15024288274473038 0.0009665231526227924 0.9438714419765777 ['ENSG00000236287|ENST00000413761|ZBED5'] 12558 9158 DLDHSIGTQY True H1975_Epitope_Rep2 1147.51456717515 1147.51346993586 40.177 2 0.1502413566774356 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4'] 116957 14633 TYPIKTPTF True PC9_epitope_Rep6 1066.5698972233001 1066.5688099358601 68.203 2 0.15023949124228675 0.0009665231526227924 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 21350 5827 ERLKEAYSV True PC9_epitope_Rep4 1093.57677350889 1093.57566993586 29.277 2 0.15023536246943212 0.0009665231526227924 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 110388 21006 TILRLLQQV True PC9_epitope_Rep1 1082.68117900778 1082.68008993586 85.627 2 0.15023422500814881 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 103367 13717 SQVPEVTTV True PC9_epitope_Rep2 958.49712620586 958.49602993586 58.053 2 0.1502314456705134 0.0009665231526227924 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 52324 12261 KPANVFITA True PC9_epitope_Rep5 959.54401682863 959.54290993586 52.15 2 0.1502287355101282 0.0009665231526227924 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 29606 19975 FVLDKVPFL True PC9_epitope_Rep6 1076.6270181766 1076.62592993586 89.498 2 0.15022749118422882 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 74115 12144 NHVTPPNVSL True PC9_epitope_Rep2 1076.56145779792 1076.56036993586 52.022 2 0.15022731760768968 0.0009665231526227924 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 2364 9963 AEQFKLIQA True H1975_Epitope_Rep1 1046.5760452329 1046.57547496793 43.26 1 0.15022534600657042 0.0009665231526227924 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 70210 23860 LYLPSFFTY True PC9_epitope_Rep1 1149.57464825057 1149.57354993586 96.579 2 0.15022143165559673 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 72088 18346 MRDPIRILV True PC9_epitope_Rep1 1111.65358436095 1111.65248993586 75.357 2 0.15022103313587332 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 92438 4472 RQVASHVGL True NCI_RA007_Epitope_Rep4 965.5406627836898 965.53956993586 23.577 2 0.15021819383404622 0.0009665231526227924 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 21343 17761 ERLGQFMTL True PC9_epitope_Rep6 1093.55901526977 1093.5579099358602 80.951 2 0.15021804502667005 0.0009665231526227924 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 74215 12188 NIDPITM[Oxidation]AY True H1975_Epitope_Rep1 1052.48484765044 1052.4842749679299 51.9 1 0.1502137455803696 0.0009665231526227924 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 17413 5342 EHFPNHQQL True PC9_epitope_Rep4 1148.53630567924 1148.53465490379 27.266 3 0.1502085676528655 0.0009665231526227924 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 132293 16796 VYLKPSYAF True PC9_epitope_Rep2 1086.57498260374 1086.57388993586 69.853 2 0.15020458227109534 0.0009665231526227924 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4', 'ENST00000597277.1_9:43426178-43426727:-|nuORF'] 75573 19404 NQPGVLIQV True PC9_epitope_Rep2 966.5498304850599 966.54928496793 80.015 1 0.15019709406121368 0.0009665231526227924 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 43270 10724 IHDGM[Oxidation]NLEL True PC9_epitope_Rep4 1056.49099566004 1056.4898899358602 49.004 2 0.1501932265985033 0.0009665231526227924 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 47689 20918 IYPTTYVQF True PC9_epitope_Rep2 1130.56481184286 1130.56370993586 85.907 2 0.15019228616603386 0.0009665231526227924 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 87792 12450 QVIDGFFVK True NCI_RA007_Epitope_Rep4 1051.57023157647 1051.56912993586 54.896 2 0.15018691932883296 0.0009665231526227924 0.9438714419765777 ['ENSG00000172732|ENST00000308110|MUS81', 'ENST00000530928.5_1_11:65631499-65632379:+|nuORF'] 96926 4057 SETSGIARP True NCI_RA007_Epitope_Rep5 916.4614094034799 916.46030993586 22.048 2 0.15018512891576247 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 18119 8171 EILSEVER True NCI_RA007_Epitope_Rep1 973.5080252427299 973.50692993586 35.781 2 0.15018469997409437 0.0009665231526227924 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 73807 10323 NHDTGEYVL True PC9_epitope_Rep2 1046.46688870674 1046.4657899358601 45.035 2 0.15018145334336225 0.0009665231526227924 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 21608 16226 ERSPLDQVL True PC9_epitope_Rep4 1055.56112344475 1055.56002993586 70.355 2 0.15017152024184216 0.0009665231526227924 0.9438714419765777 ['ENSG00000168994|ENST00000380283|PXDC1'] 32420 8190 GGGQIIPTAR True PC9_epitope_Rep1 968.5403284305199 968.53922993586 36.337 2 0.15017101324161897 0.0009665231526227924 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 32967 11738 GISRQGIIAV True PC9_epitope_Rep6 1012.6029286870798 1012.60182993586 56.305 2 0.1501695048946068 0.0009665231526227924 0.9438714419765777 ['ENSG00000005100|ENST00000225296|DHX33'] 113524 9352 TQTAVITRI True PC9_epitope_Rep6 1001.5869442697699 1001.58584993586 46.159 2 0.15016804326871402 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 27192 17216 FLSQPILL True H1975_Epitope_Rep3 929.5586042636099 929.55805496793 71.864 1 0.15016269121658402 0.0009665231526227924 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 76654 23069 NTIPLFVQL True PC9_epitope_Rep1 1043.60153170475 1043.6004299358601 93.535 2 0.15015889092803214 0.0009665231526227924 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'JUP|p.R582Q|1|0.15|ENSG00000173801|chr17:41758427-41758427|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 1957 6147 AEIPETSNA True H1975_Epitope_Rep3 930.4294405688601 930.4288949679301 28.655 1 0.1501553126168688 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 120250 10808 VFPDKGYSF True NCI_RA007_Epitope_Rep3 1058.5072969667401 1058.5061899358602 49.561 2 0.1501479692850318 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 84203 9285 QETLTNISA True H1975_Epitope_Rep2 975.48728979815 975.48618993586 40.672 2 0.15013189590768608 0.0009665231526227924 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF', 'nc|ENSG00000167657|O43293-2|DAPK3'] 106366 5619 SVSNVVITK True NCI_RA007_Epitope_Rep4 945.54949613189 945.54838993586 28.214 2 0.15012749927916652 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 72085 15486 M[Oxidation]RDPIRILV True PC9_epitope_Rep5 1127.64849936095 1127.64685490379 64.576 3 0.1501266077699056 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 16046 9243 EEALPVTTA True H1975_Epitope_Rep3 929.47057710485 929.47002496793 40.545 1 0.15012419062568325 0.0009665231526227924 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 136714 16893 YIITGGGFL True H1975_Epitope_Rep2 939.5065686907499 939.5060249679301 70.224 1 0.15012079210335924 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 103605 15808 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.60010993586 65.618 2 0.15011994688183328 0.0009665231526227924 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 35855 15296 GVAANDVIVHI True PC9_epitope_Rep6 1106.6084079903399 1106.60730993586 70.954 2 0.15011875068815048 0.0009665231526227924 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 44702 23054 IPNSIMTILEA True PC9_epitope_Rep3 1200.6424105405601 1200.6413099358601 93.944 2 0.15011689768524816 0.0009665231526227924 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 97608 10981 SHAELETAL True PC9_epitope_Rep1 969.47672511445 969.47562993586 47.128 2 0.15011304832265848 0.0009665231526227924 0.9438714419765777 ['GPC1|p.P538Rfs*15|1|0.17|ENSG00000063660|chr2:240466222-240466222|C/-|frameshift_variant', 'ENSG00000063660|ENST00000264039|GPC1', 'nc|ENSG00000063660|P35052-2|GPC1', 'ENST00000469694.5_1_2:241381745-241403123:+|nuORF'] 120302 10924 VFPEKGYSF True NCI_RA007_Epitope_Rep5 1072.5229470308798 1072.52184993586 48.659 2 0.15010641608484657 0.0009665231526227924 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 29223 15275 FVDDYTVRV True PC9_epitope_Rep4 1112.55022440788 1112.54912993586 66.684 2 0.15010632360493203 0.0009665231526227924 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 25828 8708 FGESDELIGQK True H1975_Epitope_Rep3 1221.5877321154096 1221.5866299358602 38.494 2 0.1501035490251532 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 34501 8120 GQDVGRYQV True PC9_epitope_Rep3 1020.49885754136 1020.49776993586 36.21 2 0.15010333532628004 0.0009665231526227924 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 87297 22028 QSVDLVFPV True PC9_epitope_Rep2 1002.5385970950199 1002.53750993586 90.203 2 0.15009529679177844 0.0009665231526227924 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 17377 17517 EHFAALQSL True PC9_epitope_Rep1 1014.51344497634 1014.51234993586 72.173 2 0.15009276046165645 0.0009665231526227924 0.9438714419765777 ['ENST00000526789.1_1_11:36300025-36310962:-|nuORF', 'ENST00000528608.5_1_11:36298627-36310962:-|nuORF', 'nc|ENSG00000110442|Q9P000-2|COMMD9', 'ENSG00000110442|ENST00000263401|COMMD9'] 139927 18676 YVFPGVTRL True PC9_epitope_Rep4 1050.58621599378 1050.5851099358601 79.917 2 0.1500924511283018 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 38018 8845 HEIEVETIP True NCI_RA007_Epitope_Rep3 1065.53423999057 1065.5331499358601 41.884 2 0.15009235212929778 0.0009665231526227924 0.9438714419765777 ['ENSG00000100811|ENST00000262238|YY1'] 71125 19284 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 80.038 2 0.15009213377624328 0.0009665231526227924 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 140649 18257 YYPEHFTLL True PC9_epitope_Rep6 1181.57571087973 1181.57460993586 82.867 2 0.15009056610943824 0.0009665231526227924 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10'] 74042 19647 NHSFMPIVL True PC9_epitope_Rep4 1056.54263692964 1056.5415299358601 83.69 2 0.15008926316270152 0.0009665231526227924 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 74579 5716 NLDKNTVGY True H1975_Epitope_Rep2 1022.5032742154599 1022.50216993586 26.985 2 0.1500888458766471 0.0009665231526227924 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion'] 21045 16318 ERDGFQDVL True PC9_epitope_Rep1 1077.50908787189 1077.50798993586 67.585 2 0.1500885946641899 0.0009665231526227924 0.9438714419765777 ['PNPLA6|p.D881Tfs*24|1|0.35|ENSG00000032444|chr19:7554696-7554696|G/-|frameshift_variant', 'ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6'] 130480 15299 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 70.965 2 0.15008223812915705 0.0009665231526227924 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 75740 9718 NRAAAQYYL True PC9_epitope_Rep6 1068.53524305008 1068.5341499358601 47.783 2 0.15007921242537828 0.0009665231526227924 0.9438714419765777 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4', 'ENST00000427137.1_1_7:46039864-46040332:-|nuORF'] 60047 12537 LHSDLEYTV True PC9_epitope_Rep4 1075.51858992643 1075.51748993586 56.043 2 0.15007624482382573 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 138359 15379 YRDENLVTI True PC9_epitope_Rep5 1121.57168812845 1121.5705899358602 64.164 2 0.15006740595439141 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5', 'ENST00000502747.1_1_5:79454657-79462329:-|nuORF'] 73686 12009 NGQDLGVAFK True PC9_epitope_Rep3 1047.5349086969097 1047.53380993586 51.218 2 0.1500653937234123 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 120281 15651 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 68.129 2 0.15006480794256968 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 71430 21713 M[Oxidation]IPLLLAAL True PC9_epitope_Rep6 969.5932759006099 969.5921699358599 96.405 2 0.1500616238105199 0.0009665231526227924 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 84910 9062 QHSTAQLNL True PC9_epitope_Rep5 1010.5145076055 1010.51340993586 39.802 2 0.15005585391745827 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 33790 12752 GLSTEGIYRV True PC9_epitope_Rep6 1093.57677350889 1093.57566993586 60.537 2 0.15005186317034724 0.0009665231526227924 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 34925 18614 GQWASVIRV True PC9_epitope_Rep5 1014.5610638750999 1014.55996993586 76.625 2 0.15004571619819795 0.0009665231526227924 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 21256 12459 ERIGETPEL True PC9_epitope_Rep3 1042.5294889632999 1042.52838993586 52.947 2 0.15004211617917987 0.0009665231526227924 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 98070 19288 SHVDLVVMV True PC9_epitope_Rep5 997.52665251233 997.52554993586 79.235 2 0.15003485924335558 0.0009665231526227924 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 29234 15571 FVDEPLIHA True PC9_epitope_Rep4 1039.5338460677497 1039.53274993586 67.814 2 0.15001959691696087 0.0009665231526227924 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 14053 8463 DSDGAQDYY True H1975_Epitope_Rep3 1032.3672342351201 1032.3666749679298 37.537 1 0.15001508104031475 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000562988.5_1_16:2052496-2059683:-|nuORF', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 108396 5978 TEEAAVAIKA True H1975_Epitope_Rep1 1001.5393253710098 1001.53822993586 28.065 2 0.15001031928582595 0.0009665231526227924 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 29317 12504 FVDPSQDHAL True PC9_epitope_Rep5 1127.52473793603 1127.52364993586 53.095 2 0.15000469118157136 0.0009665231526227924 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 7128 11680 AQYEHDLEV True PC9_epitope_Rep1 1102.4931034545798 1102.49200993586 49.804 2 0.15000361192829717 0.0009665231526227924 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 110448 15370 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.53308993586 63.938 2 0.15000137906599562 0.0009665231526227924 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 28797 12865 FTDEEVDEMY True H1975_Epitope_Rep2 1276.4805497352 1276.4794499358602 54.598 2 0.14999118048613844 0.0009665231526227924 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 39722 11084 HPVLLTEA True PC9_epitope_Rep5 878.4861675993401 878.48561496793 47.623 1 0.14998872500695198 0.0009665231526227924 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'POTEF|p.E799K|1|0.23|ENSG00000196604|chr2:130075077-130075077|C/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 41421 11449 IASPEGQDYLK True PC9_epitope_Rep5 1219.6084675599898 1219.60736993586 49.036 2 0.1499830238520502 0.0009665231526227924 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 34724 7794 GQNPTEAEL True NCI_RA007_Epitope_Rep2 957.44033960573 957.43924993586 34.945 2 0.14998184328826172 0.0009665231526227924 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 86151 9609 QPSEVLRTV True PC9_epitope_Rep2 1027.56620882519 1027.5651099358602 42.303 2 0.14997809623549943 0.0009665231526227924 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 124316 11539 VLDPKVGFY True H1975_Epitope_Rep2 1036.5593325395998 1036.55822993586 49.444 2 0.14996745294253863 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 102948 12066 SQIPAQPSV True PC9_epitope_Rep1 925.48689587533 925.48578993586 51.272 2 0.14996499414685543 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 33396 12117 GLFIIDDK True H1975_Epitope_Rep1 919.5014833103099 919.50038993586 51.622 2 0.14996201630323783 0.0009665231526227924 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 40921 16716 HVVEILVET True PC9_epitope_Rep5 1037.57571087973 1037.57460993586 69.304 2 0.1499563309964425 0.0009665231526227924 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 76187 18336 NRTELPLTL True PC9_epitope_Rep1 1055.59750895347 1055.59640993586 75.317 2 0.1499555930427791 0.0009665231526227924 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 20988 12925 ERALQQYTL True PC9_epitope_Rep2 1120.5876725457601 1120.58656993586 55.011 2 0.1499494522273777 0.0009665231526227924 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 41473 11132 IAYSRPVYF True H1975_Epitope_Rep2 1114.5811306133398 1114.58002993586 47.855 2 0.14994692914165103 0.0009665231526227924 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 114352 13163 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45454993586 55.727 2 0.14994520324656926 0.0009665231526227924 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 17243 18311 EHALLAYTL True PC9_epitope_Rep4 1029.5494961318898 1029.54838993586 78.501 2 0.14994450183948832 0.0009665231526227924 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 11173 20912 DEHLQLISL True PC9_epitope_Rep5 1066.56587447202 1066.56476993586 85.493 2 0.1499435117928585 0.0009665231526227924 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 3941 14164 AHDTTLVAL True PC9_epitope_Rep3 939.50254593947 939.50144993586 59.567 2 0.1499402413147343 0.0009665231526227924 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 133527 17005 WHHTFYNEL True PC9_epitope_Rep3 1245.55670677065 1245.5550749037902 70.568 3 0.1499383884525312 0.0009665231526227924 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 86998 18199 QRYNSFISL True PC9_epitope_Rep2 1126.5771078620598 1126.5760099358602 75.309 2 0.14993115960750908 0.0009665231526227924 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 89190 12551 REIEELLAEA True NCI_RA007_Epitope_Rep4 1171.6084675599898 1171.60736993586 55.294 2 0.1499300366476919 0.0009665231526227924 0.9438714419765777 ['ENST00000541077.1_1_12:109895986-109915086:-|nuORF', 'ENST00000535747.5_1_12:109898344-109915067:-|nuORF', 'nc|ENSG00000110906|Q9H3F6-2|KCTD10', 'ENSG00000110906|ENST00000228495|KCTD10'] 23733 13253 EYIPKWEQF True NCI_RA007_Epitope_Rep4 1238.5971746003 1238.5960699358602 58.109 2 0.14990858451731068 0.0009665231526227924 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 7172 22277 ARDEIIWLL True PC9_epitope_Rep3 1127.63389446219 1127.63278993586 90.973 2 0.14990467802168322 0.0009665231526227924 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 104743 8041 STDKFKTDFY True H1975_Epitope_Rep3 1250.58191845898 1250.58028490379 35.903 3 0.14989547340131162 0.0009665231526227924 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6'] 35226 9555 GSHSMRYFFT True H1975_Epitope_Rep2 1231.5444278347898 1231.54279490379 41.727 3 0.14989178832176903 0.0009665231526227924 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 45164 19750 IRDNFVIVY True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 81.013 2 0.14989149706516874 0.0009665231526227924 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 84933 15224 QHVPGSPFSV True PC9_epitope_Rep3 1053.52434401321 1053.5232499358601 63.705 2 0.14988735221975835 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 74740 22010 NLLKLIAEV True PC9_epitope_Rep3 1011.6328318330299 1011.63172993586 89.959 2 0.14988725817221715 0.0009665231526227924 0.9438714419765777 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 132142 10250 VYISEHEHF True PC9_epitope_Rep1 1159.5298233164701 1159.5281849037901 44.31 3 0.14987563916029228 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 39685 8279 HPTENLIASA True PC9_epitope_Rep4 1051.52982331647 1051.5287299358602 39.306 2 0.14987113515285821 0.0009665231526227924 0.9438714419765777 ['ENSG00000196981|ENST00000330689|WDR5B'] 138194 10409 YQRADFVL True NCI_RA007_Epitope_Rep3 1010.5185303567798 1010.51742993586 48.013 2 0.14986520562073677 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF', 'FKBP8|p.A241V|1|0.13|ENSG00000105701|chr19:18538263-18538263|G/A|missense_variant'] 129666 15087 VTIEDVQKL True PC9_epitope_Rep4 1043.58627556343 1043.5851699358602 65.965 2 0.14986241155916138 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 21064 10794 ERDMSNVSL True PC9_epitope_Rep1 1049.48115887189 1049.48006993586 46.407 2 0.14986144693274325 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 132607 20497 VYPQYVIEY True PC9_epitope_Rep2 1172.57537652656 1172.57426993586 84.272 2 0.14986082097056272 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 140678 12882 YYPSTPGRYSI True PC9_epitope_Rep6 1302.6244519773 1302.62334993586 61.074 2 0.1498564427168116 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 129388 17111 VTEGLTDVILY True H1975_Epitope_Rep2 1221.64926974281 1221.64816993586 71.091 2 0.14985239483119858 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 9985 13474 AYSRVQYQF True PC9_epitope_Rep5 1160.5614577979202 1160.56036993586 56.845 2 0.1498517398435672 0.0009665231526227924 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 17331 14105 EHDPSSIYL True PC9_epitope_Rep5 1059.48728979815 1059.48618993586 59.265 2 0.14984687292517387 0.0009665231526227924 0.9438714419765777 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 127458 10044 VQSNRILGV True PC9_epitope_Rep4 984.5716285587998 984.57052993586 46.3 2 0.14983625184064533 0.0009665231526227924 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 115830 20608 TVMKDILQAV True PC9_epitope_Rep3 1116.6212811731598 1116.62018993586 84.538 2 0.14983217237312726 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 107769 20728 TAMDVVYAL True PC9_epitope_Rep4 981.4841189940099 981.48302993586 87.895 2 0.14983040059805955 0.0009665231526227924 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 65113 10272 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42816496793 44.519 1 0.14983037318008144 0.0009665231526227924 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 1564 5504 AEFAERTVA True NCI_RA007_Epitope_Rep3 992.4927095317599 992.49160993586 28.651 2 0.1498099467257466 0.0009665231526227924 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 116417 9038 TWNPGRPEPGS True PC9_epitope_Rep5 1196.55743504664 1196.55632993586 39.71 2 0.1498031091494223 0.0009665231526227924 0.9438714419765777 ['CON__P02672'] 106937 18794 SYKNGFLNL True PC9_epitope_Rep5 1054.54474510462 1054.54364993586 77.303 2 0.14979832520187197 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 28412 10444 FSDYLHPQY True H1975_Epitope_Rep1 1168.5189242796 1168.5178299358602 45.127 2 0.1497980042289294 0.0009665231526227924 0.9438714419765777 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion'] 76349 9216 NSEPETLEY True H1975_Epitope_Rep1 1080.46113461996 1080.4600299358601 40.358 2 0.14979664868513906 0.0009665231526227924 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 31582 10247 GEFSITYKP True NCI_RA007_Epitope_Rep4 1040.5178616504397 1040.51676993586 46.269 2 0.1497915039294242 0.0009665231526227924 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 84093 8871 QEQFNSIAA True H1975_Epitope_Rep1 1006.4719740871798 1006.47086993586 39.035 2 0.14978868035384316 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 139564 5897 YTNFDAER True NCI_RA007_Epitope_Rep1 1014.4406739588999 1014.43956993586 26.988 2 0.14978414947112811 0.0009665231526227924 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 20675 19080 EQIEALLHTV True PC9_epitope_Rep4 1151.6186383208699 1151.61754993586 81.482 2 0.14977611967694998 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000241258|O75575-3|CRCP', 'ENST00000492264.1_1_7:65615923-65617341:+|nuORF', 'nc|ENSG00000241258|O75575-4|CRCP', 'nc|ENSG00000241258|O75575-2|CRCP', 'ENSG00000241258|ENST00000395326|CRCP'] 105463 7165 SVASISLTK True NCI_RA007_Epitope_Rep4 904.52294703088 904.52184993586 34.182 2 0.1497741480091955 0.0009665231526227924 0.9438714419765777 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 35425 11493 GTDMEPSLY True H1975_Epitope_Rep3 1011.42191266027 1011.4213749679301 49.331 1 0.14977062539076838 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 129219 8760 VTDLAGNEY True H1975_Epitope_Rep1 980.4450906330001 980.44454496793 38.627 1 0.14976683518466222 0.0009665231526227924 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 76859 22040 NVIESFTEL True PC9_epitope_Rep1 1050.5233409537 1050.5222499358601 89.591 2 0.14975688021732272 0.0009665231526227924 0.9438714419765777 ['RAB40A|p.I163V|1|0.09|ENSG00000172476|chrX:103500270-103500270|T/C|missense_variant', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENSG00000197562|ENST00000248139|RAB40C'] 9793 8839 AYLHTTTTF True NCI_RA007_Epitope_Rep4 1053.51311062317 1053.51200993586 40.808 2 0.14975494240349788 0.0009665231526227924 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 98013 10704 SHSSLVSSI True PC9_epitope_Rep1 915.46616043075 915.46506993586 46.062 2 0.14974615584230436 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 105715 12488 SVHKGFAFV True PC9_epitope_Rep3 990.5287011176598 990.52760993586 53.06 2 0.14974443917868668 0.0009665231526227924 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 8546 5008 ATYSVGMQK True NCI_RA007_Epitope_Rep5 983.4746169394699 983.47350993586 25.967 2 0.14974301712421445 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'nc|ENSG00000258628|A8MT19|RHPN2P1', 'ENST00000592247.1_1_19:33470904-33481620:-|nuORF'] 140735 12976 YYQHIVTTL True PC9_epitope_Rep6 1136.5866099166 1136.58550993586 61.482 2 0.1497398010294484 0.0009665231526227924 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 74238 14798 NIDPITMAY True H1975_Epitope_Rep2 1036.48993265044 1036.4888299358602 62.078 2 0.14973069590919114 0.0009665231526227924 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 8085 11078 ATEFIM[Oxidation]NEY True H1975_Epitope_Rep3 1132.47467688956 1132.47356993586 47.705 2 0.1497289937121448 0.0009665231526227924 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556791.1_1_14:102499420-102503925:+|nuORF'] 94412 19225 RYFDVGLHNF True PC9_epitope_Rep1 1266.6145559999397 1266.6129149037902 78.747 3 0.14972898596695983 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000054392|Q5VTY9-6|HHAT', 'nc|ENSG00000054392|Q5VTY9-5|HHAT', 'nc|ENSG00000054392|Q5VTY9-2|HHAT', 'ENSG00000054392|ENST00000261458|HHAT', 'nc|ENSG00000054392|Q5VTY9-7|HHAT', 'nc|ENSG00000054392|Q5VTY9-3|HHAT'] 34706 18492 GQMGSFIRL True PC9_epitope_Rep2 1007.5222358382299 1007.52112993586 76.465 2 0.1497256994126425 0.0009665231526227924 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 96502 9024 SELEGTPEV True H1975_Epitope_Rep1 959.4447562798299 959.4442049679301 39.617 1 0.14971659886819721 0.0009665231526227924 0.9438714419765777 ['ENSG00000124787|ENST00000380051|RPP40', 'nc|ENSG00000124787|O75818-2|RPP40'] 96818 8788 SESFVSPEA True H1975_Epitope_Rep2 951.41854153199 951.4179949679301 38.767 1 0.14970080559811882 0.0009665231526227924 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 76096 14226 NRNEDPLVL True PC9_epitope_Rep5 1068.55637241748 1068.55526993586 59.726 2 0.14970007671066024 0.0009665231526227924 0.9438714419765777 ['ENSG00000165355|ENST00000298097|FBXO33'] 67140 16438 LTDEAFEFY True H1975_Epitope_Rep2 1133.49170647225 1133.4906099358602 68.449 2 0.1496915179213142 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 139092 10076 YSNKEIFL True H1975_Epitope_Rep1 1012.5229470308799 1012.52184993586 43.693 2 0.14968869648818245 0.0009665231526227924 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 91812 8473 RPNDIM[Oxidation]AEV True PC9_epitope_Rep1 1059.50189469691 1059.5007899358602 37.426 2 0.14968796459707134 0.0009665231526227924 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 61968 10756 LLLPGELAK True NCI_RA007_Epitope_Rep3 952.5957180483199 952.59462993586 49.353 2 0.14968544422425695 0.0009665231526227924 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 104303 16670 SSELFTLTY True H1975_Epitope_Rep2 1059.51244191683 1059.5113499358602 69.354 2 0.1496798031726802 0.0009665231526227924 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 64617 16092 LREPLPATL True PC9_epitope_Rep3 1008.59678067748 1008.59568993586 67.047 2 0.14967853270564296 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 109726 15930 THGIFTIST True PC9_epitope_Rep1 975.5025459394701 975.50144993586 66.084 2 0.14967547922555785 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 130443 16995 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 70.619 2 0.14966749013180894 0.0009665231526227924 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 94756 14229 RYLPDTLLL True NCI_RA007_Epitope_Rep3 1102.63864548946 1102.63754993586 63.28 2 0.14965515574154634 0.0009665231526227924 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 2716 11407 AETLSSWEA True H1975_Epitope_Rep3 992.445090633 992.44454496793 48.993 1 0.14964696111930886 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 73218 6755 NEGVATYAA True H1975_Epitope_Rep2 894.4083112014598 894.40776496793 30.898 1 0.14964551109941449 0.0009665231526227924 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 2788 7154 AEVDRQVIP True NCI_RA007_Epitope_Rep3 1025.5505587610498 1025.54946993586 35.257 2 0.14964495856540233 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 3879 8952 AHDDGRWSL True PC9_epitope_Rep2 1055.47845644995 1055.47734993586 39.79 2 0.14964276223883616 0.0009665231526227924 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 28848 10447 FTDPGQVAY True H1975_Epitope_Rep2 996.4552613938799 996.45416993586 45.202 2 0.14964145440836576 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 74097 5633 NHVNSGCQL True PC9_epitope_Rep3 970.42906372938 970.42796993586 26.744 2 0.1496381793596371 0.0009665231526227924 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 44949 9637 IQFNPPLSEK True NCI_RA007_Epitope_Rep3 1171.62372370131 1171.62262993586 44.985 2 0.14963266013927198 0.0009665231526227924 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 139925 19388 YVFPGVTRL True PC9_epitope_Rep2 1050.58621599378 1050.5851099358601 79.953 2 0.14963246757388554 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 38258 8150 HFC[Carbamidomethyl]GGSLINSQ True NCI_RA007_Epitope_Rep1 1218.54515639021 1218.5440499358601 35.701 2 0.1496288266236803 0.0009665231526227924 0.9438714419765777 ['CON__P00761'] 125973 8702 VPAGGAVAV True PC9_epitope_Rep6 739.42283906679 739.42229496793 43.324 1 0.14962690607850532 0.0009665231526227924 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 114362 8935 TSDETTLEY True H1975_Epitope_Rep1 1057.44515020265 1057.4440499358602 39.275 2 0.14962620414745395 0.0009665231526227924 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 2256 6475 AEPAKIEAFR True NCI_RA007_Epitope_Rep2 1130.6084079903399 1130.6067749037902 29.795 3 0.14962027490636032 0.0009665231526227924 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 97725 20126 SHFEGLITTI True PC9_epitope_Rep1 1116.58152453616 1116.5804299358601 82.245 2 0.14961013805274892 0.0009665231526227924 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 88671 8187 RAYDGTTYL True H1975_Epitope_Rep3 1058.50327421546 1058.5021699358601 36.471 2 0.14961007612452418 0.0009665231526227924 0.9438714419765777 ['ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39'] 93443 15052 RSDFFTSFY True H1975_Epitope_Rep2 1168.5189242796 1168.5178299358602 63.05 2 0.14960936493828847 0.0009665231526227924 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA', 'nc|ENSG00000090060|P51003-2|PAPOLA', 'ENSG00000218823|ENST00000404991|PAPOLB', 'PAPOLB|p.K137E|1|0.26|ENSG00000218823|chr7:4861402-4861402|T/C|missense_variant'] 42016 4985 IEDSPTKRLP True H1975_Epitope_Rep2 1154.62953735774 1154.62789490379 24.258 3 0.149599903027971 0.0009665231526227924 0.9438714419765777 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000325117.8_1_X:101802327-101802774:-|nuORF'] 34709 17786 GQMGSFIRL True PC9_epitope_Rep4 1007.5222358382299 1007.52112993586 76.442 2 0.14959969349772376 0.0009665231526227924 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 84683 10737 QHFDSVM[Oxidation]QL True PC9_epitope_Rep4 1119.5018946969099 1119.5007899358602 49.057 2 0.1495984709677854 0.0009665231526227924 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 9681 12882 AYHELAQVY True PC9_epitope_Rep1 1092.5240096600398 1092.52290993586 54.424 2 0.14959836512969732 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENSG00000141030|ENST00000268717|COPS3'] 4130 15175 AHTPVIISV True PC9_epitope_Rep3 935.54401682863 935.54290993586 63.516 2 0.1495934195426534 0.0009665231526227924 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 34918 18642 GQWASVIRV True PC9_epitope_Rep1 1014.5610638750999 1014.55996993586 76.495 2 0.1495912842282899 0.0009665231526227924 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 129359 11982 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.52277496793 51.096 1 0.1495912147329152 0.0009665231526227924 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 76576 6554 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.46030993586 30.175 2 0.14958894424745636 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 127355 15916 VQPRNWLLF True NCI_RA007_Epitope_Rep4 1171.6502132326698 1171.64910993586 69.09 2 0.14958813271005458 0.0009665231526227924 0.9438714419765777 ['ENSG00000060762|ENST00000360961|MPC1'] 139973 21815 YVITDLTQL True PC9_epitope_Rep2 1064.57537652656 1064.57426993586 89.385 2 0.1495838660120922 0.0009665231526227924 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 114796 17281 TTDCLQLLAY True H1975_Epitope_Rep2 1139.55326118299 1139.55216993586 71.762 2 0.14958164480781783 0.0009665231526227924 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'JUP|p.G298D|1|0.2|ENSG00000173801|chr17:41767395-41767395|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 104757 13082 STDLQDYTYY True H1975_Epitope_Rep2 1267.52446315251 1267.52336993586 55.443 2 0.1495783253901503 0.0009665231526227924 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 107534 11258 TADHNLLLY True H1975_Epitope_Rep2 1058.53965972418 1058.53856993586 48.348 2 0.14957814246920498 0.0009665231526227924 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 30260 7634 GAAKDLPGV True PC9_epitope_Rep2 826.4548674710599 826.45376993586 34.733 2 0.14957775314955227 0.0009665231526227924 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 43133 9090 IGPLGLSPK True H1975_Epitope_Rep3 880.5382031722 880.53710993586 39.952 2 0.14957494304357585 0.0009665231526227924 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12'] 74677 21406 NLIDLDDLYV True PC9_epitope_Rep6 1191.6023195503901 1191.6012299358601 95.212 2 0.1495711219236933 0.0009665231526227924 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 38786 9218 HHYSGNNIEL True PC9_epitope_Rep1 1182.5417849825 1182.5406899358602 40.309 2 0.14957038803076722 0.0009665231526227924 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 63974 9996 LQAETSQQL True PC9_epitope_Rep5 1016.51383889916 1016.51274993586 43.425 2 0.1495703191000071 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 94617 14845 RYLDEINLL True NCI_RA007_Epitope_Rep4 1147.62372370131 1147.62262993586 64.564 2 0.14956908907463512 0.0009665231526227924 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 109219 18627 TFTFSHATF True PC9_epitope_Rep5 1057.4868958753298 1057.48578993586 76.674 2 0.14956823743941952 0.0009665231526227924 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 41069 15550 HYKPTPLYF True PC9_epitope_Rep5 1164.59678067748 1164.59568993586 64.823 2 0.14956615268863316 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 12646 9085 DLEIATYR True H1975_Epitope_Rep1 979.4974605590301 979.49636993586 39.849 2 0.14956528721198917 0.0009665231526227924 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 84230 2728 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 14.571 2 0.14955701972446164 0.0009665231526227924 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 57860 7312 LEQEIATYR True NCI_RA007_Epitope_Rep2 1121.57168812845 1121.5705899358602 33.064 2 0.14955112518751626 0.0009665231526227924 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16722254-16722455:-|nuORF', 'CON__P35900', 'KRT20|p.R372S|2|0.36|ENSG00000171431|chr17:40878170-40878170|G/T|missense_variant', 'ENSG00000171431|ENST00000167588|KRT20', 'CON__Q61782', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'CON__Q6IFX2', 'ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0', 'CON__Q9D312'] 103365 14012 SQVPEVTTV True PC9_epitope_Rep1 958.49712620586 958.49602993586 58.735 2 0.14954811245947616 0.0009665231526227924 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 52403 8722 KPGM[Oxidation]FFNPEE True H1975_Epitope_Rep1 1210.53286047202 1210.5317699358602 38.477 2 0.14954248053903932 0.0009665231526227924 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153760401-153761015:-|nuORF'] 32111 5980 GEYIIRQGA True NCI_RA007_Epitope_Rep3 1005.5243440132098 1005.52324993586 30.503 2 0.14953388506977122 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000185532|Q13976|PRKG1', 'ENSG00000185532|ENST00000373980|PRKG1', 'ENST00000373975.2_1_10:53806680-53893656:+|nuORF', 'PRKG1|p.K447Ifs*3|1|0.14|ENSG00000185532|chr10:52272415-52272424|GCAAATATTT/-|frameshift_variant'] 54056 20703 KYLTAEAFGF True PC9_epitope_Rep5 1145.5757108797297 1145.57460993586 84.691 2 0.14952978422032667 0.0009665231526227924 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 95859 16382 SDLRMLDSL True PC9_epitope_Rep6 1048.52229540788 1048.52118993586 75.401 2 0.14952870257068063 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 97612 15915 SHAENILQI True PC9_epitope_Rep1 1023.53490869691 1023.53380993586 66.028 2 0.14952815524205945 0.0009665231526227924 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 11707 5528 DHFASVHSV True PC9_epitope_Rep6 997.46174375665 997.46064993586 29.27 2 0.14952390548728065 0.0009665231526227924 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 11633 11355 DHASIQMNV True PC9_epitope_Rep2 1013.46002950449 1013.4589299358599 49.0 2 0.1495229313909506 0.0009665231526227924 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 114523 4225 TSGPTTPLK True NCI_RA007_Epitope_Rep4 900.4916469026 900.49054993586 22.565 2 0.14951624696617097 0.0009665231526227924 0.9438714419765777 ['ENSG00000188112|ENST00000341865|C6orf132'] 7189 17464 ARDETEFYL True PC9_epitope_Rep3 1142.5244035828598 1142.5233099358602 72.351 2 0.14951485521526378 0.0009665231526227924 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 97961 7359 SHQTGVVAL True PC9_epitope_Rep6 910.4872302284999 910.48612993586 37.49 2 0.1495138780519218 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 106148 17581 SVPDPELIKTV True PC9_epitope_Rep3 1196.66525416012 1196.66414993586 72.813 2 0.1495127429320541 0.0009665231526227924 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 114033 9086 TRMSTVSEL True PC9_epitope_Rep2 1022.5066453437399 1022.5055499358599 40.291 2 0.14950840830879958 0.0009665231526227924 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 92376 4581 RQQKEITAL True NCI_RA007_Epitope_Rep4 1085.61930702721 1085.61820993586 24.025 2 0.14950522828865478 0.0009665231526227924 0.9438714419765777 ['ENST00000604202.1_1_6:26373162-26373348:+|nuORF', 'ENST00000531055.1_1_6:26370743-26373574:+|nuORF', 'nc|ENSG00000186470|P78410-3|BTN3A2', 'nc|ENSG00000186470|P78410-2|BTN3A2', 'ENSG00000186470|ENST00000377708|BTN3A2'] 32045 13605 GEVLMVQV True NCI_RA007_Epitope_Rep3 873.4629896266098 873.46188993586 60.814 2 0.14950513745484725 0.0009665231526227924 0.9438714419765777 ['ENSG00000120948|ENST00000240185|TARDBP'] 3928 6841 AHDQNSNLL True PC9_epitope_Rep1 1010.47812209678 1010.47702993586 31.119 2 0.14950195564185534 0.0009665231526227924 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF'] 6345 7019 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 31.968 2 0.1495012496113609 0.0009665231526227924 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 28317 11850 FRYTAGTPY True PC9_epitope_Rep2 1074.5134449763398 1074.5123499358601 50.909 2 0.14950065919444974 0.0009665231526227924 0.9438714419765777 ['ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 109723 10788 THGGLVTGL True PC9_epitope_Rep2 853.46576650793 853.46466993586 46.813 2 0.1494982595418922 0.0009665231526227924 0.9438714419765777 ['ENSG00000119669|ENST00000238647|IRF2BPL'] 88333 20277 QYLQDAYSF True PC9_epitope_Rep2 1133.5029398622898 1133.50184993586 83.417 2 0.14949624685873186 0.0009665231526227924 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 4820 5584 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep4 1219.5754535599897 1219.57434993586 28.259 2 0.14948725547319244 0.0009665231526227924 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 23652 18724 EYGKFFVTL True PC9_epitope_Rep6 1102.5698972233 1102.5688099358601 84.664 2 0.14948637714394933 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 135370 10504 YDGIILPGK True NCI_RA007_Epitope_Rep2 974.54368247546 974.54258993586 45.452 2 0.14948414469647445 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 97616 15814 SHAENILQI True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 65.818 2 0.14948141706941534 0.0009665231526227924 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 23832 18070 EYLLKVNEI True PC9_epitope_Rep4 1119.61757569171 1119.61646993586 77.568 2 0.14948050073699415 0.0009665231526227924 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 3959 13284 AHDVDPIEL True PC9_epitope_Rep6 1007.4923751785899 1007.49126993586 62.749 2 0.1494769493288601 0.0009665231526227924 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 4068 12728 AHSDAQALVL True PC9_epitope_Rep1 1023.53490869691 1023.53380993586 53.832 2 0.14947294027623076 0.0009665231526227924 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 2129 5206 AELSEGQVR True PC9_epitope_Rep3 987.49852318819 987.4974299358599 25.106 2 0.1494721486312973 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-4|TPM1', 'nc|ENSG00000140416|P09493-10|TPM1', 'ENST00000560975.5_1_15:63335715-63353895:+|nuORF'] 28360 11668 FSDIHDFEY True H1975_Epitope_Rep1 1171.48220441771 1171.48110993586 49.87 2 0.1494662024874911 0.0009665231526227924 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.E275*|1|0.26|ENSG00000196455|chr3:130735917-130735918|-/A|frameshift_variant'] 138421 10375 YRDPYTGQSV True PC9_epitope_Rep4 1184.5462016566 1184.5451099358602 47.608 2 0.14946382144043074 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 81485 21127 PQPDVFPLF True PC9_epitope_Rep6 1058.54368247546 1058.5431749679299 94.11 1 0.14945445602447405 0.0009665231526227924 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 40652 20368 HTILDLPAV True PC9_epitope_Rep3 977.55458151233 977.55348993586 83.595 2 0.1494529416145536 0.0009665231526227924 0.9438714419765777 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 132949 21506 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep2 1230.58422733854 1230.5831299358601 88.191 2 0.14945149202520974 0.0009665231526227924 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 47745 13618 IYQKYIARF True PC9_epitope_Rep1 1200.6655289436396 1200.6638849037902 57.237 3 0.14944899536938405 0.0009665231526227924 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'CASZ1|p.I804Yfs*73|1|0.28|ENSG00000130940|chr1:10653648-10653648|G/-|frameshift_variant', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 2881 5076 AEYQRNIVS True H1975_Epitope_Rep2 1078.5407223533398 1078.5396299358601 24.607 2 0.14944761186087338 0.0009665231526227924 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2', 'ENST00000491694.1_1_3:111658417-111664240:+|nuORF'] 105004 3369 STIGPEGVHQK True NCI_RA007_Epitope_Rep2 1151.5934862021898 1151.5918349037902 17.765 3 0.14944727201072286 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 106666 21284 SYADQM[Oxidation]FLL True PC9_epitope_Rep2 1102.50049771458 1102.49940993586 87.331 2 0.14944596161880006 0.0009665231526227924 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 111163 12057 TLETVPLER True PC9_epitope_Rep1 1056.5815245361598 1056.5804299358601 51.236 2 0.14944240413824572 0.0009665231526227924 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1'] 132597 12837 VYPPPHQVF True PC9_epitope_Rep5 1082.5549158654999 1082.55380993586 54.387 2 0.149438204870206 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 8008 11356 ATDPVTGDLY True H1975_Epitope_Rep1 1050.48695544498 1050.48637496793 48.658 1 0.14943674441476404 0.0009665231526227924 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 44700 23168 IPNSIMTILEA True PC9_epitope_Rep1 1200.6424105405601 1200.6413099358601 93.91 2 0.14943363316874236 0.0009665231526227924 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 102033 6250 SPPPPPPPP True H1975_Epitope_Rep3 881.4647038787699 881.46360993586 29.052 2 0.14943143899941264 0.0009665231526227924 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 92104 11632 RPYEPINSI True PC9_epitope_Rep4 1087.56620882519 1087.5651099358602 52.499 2 0.14942880068070274 0.0009665231526227924 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2', 'GTF3C2|p.A731Cfs*26|1|0.4|ENSG00000115207|chr2:27328533-27328534|-/A|frameshift_variant'] 22978 17990 EVIKELAQI True PC9_epitope_Rep3 1041.6070110080097 1041.6059099358602 74.403 2 0.14942875508043685 0.0009665231526227924 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 75344 14605 NQAKYIPEL True PC9_epitope_Rep2 1074.57095985246 1074.5698699358602 61.447 2 0.14942795431377573 0.0009665231526227924 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 127365 11848 VQPSKYHFL True PC9_epitope_Rep5 1117.5920296502102 1117.59092993586 50.572 2 0.14942485523223661 0.0009665231526227924 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 21009 19089 ERAPSLLSL True PC9_epitope_Rep1 984.5603951687599 984.55928993586 78.216 2 0.14941730395398678 0.0009665231526227924 0.9438714419765777 ['ENST00000548091.5_1_12:93965167-93966593:+|nuORF', 'ENST00000549122.5_1_12:93965649-93966593:+|nuORF', 'ENST00000547229.1_1_12:93966071-93966593:+|nuORF', 'ENST00000536696.6_1_12:93964876-93966593:+|nuORF'] 24317 12017 FADGHVLEL True H1975_Epitope_Rep3 999.5025459394699 999.50144993586 51.384 2 0.14941534975519039 0.0009665231526227924 0.9438714419765777 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 57030 4921 LEEERTPTP True H1975_Epitope_Rep3 1070.52440358286 1070.5233099358602 24.056 2 0.14941301658106396 0.0009665231526227924 0.9438714419765777 ['ENSG00000086504|ENST00000199706|MRPL28', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 107203 22680 SYPDLLPTF True PC9_epitope_Rep2 1051.52261267771 1051.5215099358602 92.732 2 0.14941301637949042 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 40653 19369 HTILDLPAV True PC9_epitope_Rep4 977.55458151233 977.55348993586 82.614 2 0.14940894907381502 0.0009665231526227924 0.9438714419765777 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 1823 12090 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 51.517 1 0.14939665993331364 0.0009665231526227924 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 31750 7832 GELERALSA True H1975_Epitope_Rep2 944.4927095317598 944.49160993586 35.075 2 0.14939344516777298 0.0009665231526227924 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G'] 95050 17072 RYSDSTFTF True PC9_epitope_Rep1 1122.49818883502 1122.49708993586 70.494 2 0.14939020694634103 0.0009665231526227924 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 114288 7888 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.5853349679301 38.141 1 0.1493875254758516 0.0009665231526227924 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 88320 13813 QYLGQIQHI True PC9_epitope_Rep2 1098.5821932425 1098.58108993586 58.415 2 0.14938581260189546 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 132326 22657 VYLPPEAFTF True PC9_epitope_Rep2 1182.5961119711399 1182.5950099358602 92.647 2 0.14938111980876143 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 6799 17437 AQFHPTEDLVV True PC9_epitope_Rep5 1254.6244519773002 1254.62334993586 72.072 2 0.1493806910628171 0.0009665231526227924 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 43266 12087 IHDGM[Oxidation]NLEL True PC9_epitope_Rep1 1056.49099566004 1056.4898899358602 51.353 2 0.14937903664213067 0.0009665231526227924 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 67250 17257 LTDLVDDNYFY True H1975_Epitope_Rep3 1376.6136125100802 1376.6130749679298 72.024 1 0.1493784724747893 0.0009665231526227924 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 33777 11710 GLSQSALPYR True PC9_epitope_Rep5 1090.5771078620598 1090.5760099358602 50.041 2 0.14937527686730054 0.0009665231526227924 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 115757 21667 TVLQELINV True PC9_epitope_Rep4 1027.5913609438699 1027.59026993586 91.537 2 0.14936787295456036 0.0009665231526227924 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 130449 17188 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 71.27 2 0.14936546610524243 0.0009665231526227924 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 102931 21136 SQIISLQTL True PC9_epitope_Rep1 1001.5757108797301 1001.57517496793 86.13 1 0.14936107092051587 0.0009665231526227924 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 132275 13513 VYLDKFIRL True NCI_RA007_Epitope_Rep4 1165.68593003505 1165.68427490379 59.187 3 0.14935698067453465 0.0009665231526227924 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 98261 7632 SIFDGRVVAK True NCI_RA007_Epitope_Rep5 1090.61349337078 1090.6123899358602 36.059 2 0.14935037476239776 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 129314 14398 VTDSGPTFNYL True H1975_Epitope_Rep2 1212.56626839484 1212.56567496793 60.531 1 0.14934705684237323 0.0009665231526227924 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 106029 19454 SVLNVLHSL True PC9_epitope_Rep4 980.5654805492 980.56438993586 82.945 2 0.14934682575596855 0.0009665231526227924 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 18289 9272 EITALAPSTM[Oxidation]K True PC9_epitope_Rep5 1176.6060254122801 1176.6049299358601 40.613 2 0.14933774963739674 0.0009665231526227924 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77306 15583 NYKKFYEAF True PC9_epitope_Rep5 1208.5866099165999 1208.58550993586 64.95 2 0.14933578058403008 0.0009665231526227924 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 52580 11280 KPYESYIGA True PC9_epitope_Rep1 1026.5022115862998 1026.50110993586 48.268 2 0.1493334715063252 0.0009665231526227924 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 40474 13271 HSDTIQWLY True H1975_Epitope_Rep1 1161.54547338061 1161.54436993586 56.147 2 0.14933147196078697 0.0009665231526227924 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 86142 7794 QPRYPVNSV True PC9_epitope_Rep2 1058.55089311422 1058.5497899358602 35.351 2 0.14932679486053144 0.0009665231526227924 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 2574 5328 AERYDDMAA True NCI_RA007_Epitope_Rep4 1040.4233096425999 1040.42220993586 27.059 2 0.14932028583164178 0.0009665231526227924 0.9438714419765777 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 21255 11668 ERIGETPEL True PC9_epitope_Rep2 1042.5294889632999 1042.52838993586 50.211 2 0.14931636798353817 0.0009665231526227924 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 1566 5682 AEFAERTVA True NCI_RA007_Epitope_Rep5 992.4927095317599 992.49160993586 28.545 2 0.14930648237851096 0.0009665231526227924 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 7050 16625 AQVALVNEV True PC9_epitope_Rep2 941.51819600361 941.51708993586 69.193 2 0.14930438013512556 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 3992 19462 AHFPINVVI True PC9_epitope_Rep4 1008.5756513100799 1008.57507496793 82.977 1 0.14930228500071996 0.0009665231526227924 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 43284 9796 IHDNFGIVEG True H1975_Epitope_Rep3 1099.52982331647 1099.5287299358602 42.704 2 0.14930069338292956 0.0009665231526227924 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000434621.2_1_7:9655079-9655256:+|nuORF', 'ENST00000520713.5_1_8:101563216-101563492:-|nuORF'] 135459 5274 YEAPGVREA True NCI_RA007_Epitope_Rep5 990.4770594676198 990.47596993586 26.981 2 0.1492969255728681 0.0009665231526227924 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 26645 20903 FLAEDALNTV True PC9_epitope_Rep3 1091.54989005471 1091.5487899358602 85.678 2 0.1492956719264235 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 34442 17196 GQAFVIFK True PC9_epitope_Rep5 908.5119884243599 908.51088993586 71.164 2 0.14929527124679468 0.0009665231526227924 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 27315 13379 FM[Oxidation]DPASALY True H1975_Epitope_Rep2 1029.44773386573 1029.4471749679299 56.597 1 0.14929099340364058 0.0009665231526227924 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 87362 12585 QTDINLPY True H1975_Epitope_Rep2 962.4709114580198 962.46980993586 53.503 2 0.14927920628629637 0.0009665231526227924 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 98885 13043 SIWDETLYK True NCI_RA007_Epitope_Rep4 1153.5655401188499 1153.56444993586 57.272 2 0.14927452541846534 0.0009665231526227924 0.9438714419765777 ['ENSG00000155876|ENST00000380527|RRAGA', 'ENSG00000083750|ENST00000374941|RRAGB', 'nc|ENSG00000083750|Q5VZM2|RRAGB', 'ENST00000474757.1_1_X:55757854-55777647:+|nuORF'] 53648 18395 KWNPTAGVAF True PC9_epitope_Rep5 1089.56072952193 1089.56017496793 75.775 1 0.14926543524478092 0.0009665231526227924 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 138077 12796 YQEELSREL True PC9_epitope_Rep5 1165.5615173675699 1165.5604299358602 54.23 2 0.14926101452094565 0.0009665231526227924 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 28403 16023 FSDVMEDLY True H1975_Epitope_Rep3 1117.4637774722498 1117.46268993586 67.089 2 0.14924074763211426 0.0009665231526227924 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 132844 21716 VYTPTDTLVF True PC9_epitope_Rep5 1154.5859412102598 1154.5848499358601 88.568 2 0.14923783709643268 0.0009665231526227924 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 35801 21033 GTYDIFYTA True PC9_epitope_Rep2 1049.47057710485 1049.47007496793 86.356 1 0.14923381218223142 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 21047 12131 ERDGGFSEL True PC9_epitope_Rep5 1008.4512386426 1008.4501499358599 51.652 2 0.14922603798776626 0.0009665231526227924 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP'] 113920 14421 TRIGLINDM True PC9_epitope_Rep6 1031.54336520563 1031.54226993586 67.366 2 0.14922481624931602 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.P364L|1|0.32|ENSG00000107581|chr10:119065430-119065430|G/A|missense_variant'] 48516 11021 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 50.444 2 0.1492197921099545 0.0009665231526227924 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 86716 13795 QRISEAYESL True PC9_epitope_Rep3 1194.5880664685797 1194.58696993586 58.14 2 0.14921644601991055 0.0009665231526227924 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 72412 14997 MTELPAPLSY True H1975_Epitope_Rep3 1120.5474475265598 1120.5468749679299 63.076 1 0.14920215125361028 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 14882 20679 DYIKFLRSI True PC9_epitope_Rep1 1153.64954452633 1153.64788490379 84.366 3 0.149198817314469 0.0009665231526227924 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 81757 14278 PSDLTVGQFY True H1975_Epitope_Rep3 1125.5342399905699 1125.5331499358601 60.263 2 0.14919688063783257 0.0009665231526227924 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 106924 8354 SYISRTNQL True PC9_epitope_Rep4 1080.5563724174801 1080.55526993586 39.591 2 0.14919212124384557 0.0009665231526227924 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 96002 9251 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39686496793 40.54 1 0.1491916841060719 0.0009665231526227924 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 5228 11578 ALQEMVHQV True PC9_epitope_Rep2 1053.52771514149 1053.52660993586 49.86 2 0.1491912868997585 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 77567 21147 NYSPYVNYF True PC9_epitope_Rep1 1165.50802524273 1165.5069299358602 86.174 2 0.14919021688091333 0.0009665231526227924 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 102868 16220 SQHGVIIQL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 67.528 2 0.1491896788805096 0.0009665231526227924 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 74978 21369 NLVRELLAV True PC9_epitope_Rep3 1025.6233297784897 1025.62222993586 87.494 2 0.14918946608018613 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 10067 11682 AYVHMVTHF True PC9_epitope_Rep4 1103.52223583823 1103.52112993586 52.697 2 0.14918423272649972 0.0009665231526227924 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 86774 21495 QRMDILDVL True PC9_epitope_Rep5 1101.5852300176098 1101.5841299358601 87.715 2 0.14918224264001742 0.0009665231526227924 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2', 'ENST00000564507.5_1_16:1551718-1556512:+|nuORF'] 1044 5684 AEAIHSPQV True H1975_Epitope_Rep2 950.4821448480601 950.48104993586 26.862 2 0.1491805773062364 0.0009665231526227924 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.G2160D|1|0.36|ENSG00000047410|chr1:186320401-186320401|C/T|missense_variant'] 108029 7715 TDEKIVLSA True H1975_Epitope_Rep2 974.5284263341399 974.5273299358599 34.628 2 0.14917966212160463 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000101353|Q9H579-2|MROH8', 'ENSG00000101353|ENST00000343811|MROH8'] 129391 7624 VTEGSFVYK True NCI_RA007_Epitope_Rep2 1028.5178616504397 1028.51676993586 34.28 2 0.14917510055857913 0.0009665231526227924 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 47202 17899 IYAPKLQEF True PC9_epitope_Rep5 1107.59644632431 1107.5953499358602 73.866 2 0.14916642153826917 0.0009665231526227924 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 17289 16392 EHDGSLFQAV True PC9_epitope_Rep3 1101.50908787189 1101.50798993586 68.19 2 0.1491660907574976 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 15152 12281 EAEPHPLWEY True H1975_Epitope_Rep3 1269.56660274801 1269.56550993586 52.417 2 0.14916292356409128 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 108384 10180 TEDWDQPVA True H1975_Epitope_Rep2 1059.45090428943 1059.44980993586 44.159 2 0.1491581776472916 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 4642 15641 ALATLIHQV True PC9_epitope_Rep2 964.5705659296401 964.56946993586 65.438 2 0.14915790686969593 0.0009665231526227924 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 108339 4158 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 21.093 2 0.14915734310838102 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 45330 8117 ISDAPAPAY True H1975_Epitope_Rep2 903.43379767331 903.43270993586 36.171 2 0.14914794803821255 0.0009665231526227924 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 94719 14122 RYLEQLHQL True PC9_epitope_Rep3 1198.64585612822 1198.64422490379 59.406 3 0.1491469836279481 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 40085 17230 HRDDELYIL True PC9_epitope_Rep5 1172.5825871653199 1172.58094490379 71.292 3 0.14914602932012483 0.0009665231526227924 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 8162 10151 ATFTGILGK True NCI_RA007_Epitope_Rep5 906.5174677276199 906.51636993586 45.679 2 0.14914538206097333 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000167995|O76090-3|BEST1', 'ENST00000534553.5_1_11:61722629-61730618:+|nuORF'] 75508 19255 NQITQLESL True PC9_epitope_Rep4 1044.54513902744 1044.54457496793 82.168 1 0.14914527922377083 0.0009665231526227924 0.9438714419765777 ['ENSG00000138180|ENST00000371485|CEP55', 'ENST00000496302.1_1_10:95278654-95279576:+|nuORF'] 68788 13028 LVDPSVYGY True H1975_Epitope_Rep3 1011.49131254943 1011.49020993586 55.349 2 0.1491438175808839 0.0009665231526227924 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 75404 15775 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 65.497 2 0.1491435724996225 0.0009665231526227924 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 29411 20845 FVFPGELLL True NCI_RA007_Epitope_Rep3 1033.5848190114498 1033.5837299358602 90.769 2 0.14914286511257677 0.0009665231526227924 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 136178 19413 YGIPAIVKL True PC9_epitope_Rep4 972.60080342876 972.59970993586 82.782 2 0.14913528326202333 0.0009665231526227924 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 74385 18643 NITDKGIIAL True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 76.735 2 0.14913332365227233 0.0009665231526227924 0.9438714419765777 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 38771 14798 HHYEGAVVIL True PC9_epitope_Rep5 1136.5978433066398 1136.59674993586 61.92 2 0.14913116560161402 0.0009665231526227924 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 2078 6832 AELIKTVAS True H1975_Epitope_Rep3 930.53859709502 930.53750993586 31.235 2 0.14912683077624714 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'PDCD6IP|p.R290L|1|0.51|ENSG00000170248|chr3:33836078-33836078|G/T|missense_variant'] 97663 20033 SHDEVFVVL True PC9_epitope_Rep1 1043.52876068731 1043.52766993586 81.884 2 0.1491188605240149 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 83226 14511 QAALEFHGV True PC9_epitope_Rep3 970.4872302284999 970.48612993586 60.938 2 0.14909736633453138 0.0009665231526227924 0.9438714419765777 ['ENSG00000187231|ENST00000428443|SESTD1'] 23720 16378 EYIKFLRSI True PC9_epitope_Rep6 1167.6651945904698 1167.6640899358601 75.386 2 0.1490947689483499 0.0009665231526227924 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 114200 15558 TRVDPLTL True PC9_epitope_Rep3 913.5232813840499 913.52218993586 64.992 2 0.14909273032239967 0.0009665231526227924 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10', 'nc|ENSG00000100065|Q9BWT7-2|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF'] 69579 11425 LVTTVTEIAG True H1975_Epitope_Rep1 1002.5597264624199 1002.55862993586 48.926 2 0.1490869403375431 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 15241 5118 EAGEQGDIEPR True PC9_epitope_Rep3 1199.5418445521498 1199.54074993586 24.773 2 0.1490740664182257 0.0009665231526227924 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 20765 19069 EQLNGILLHL True PC9_epitope_Rep6 1148.65535818276 1148.6542699358602 85.992 2 0.149072599932761 0.0009665231526227924 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 1549 9184 AEEVWARVA True H1975_Epitope_Rep1 1029.5243440132097 1029.5232499358601 40.233 2 0.1490719472504268 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 87443 11036 QTELGNQLEY True H1975_Epitope_Rep3 1193.5564319871298 1193.55532993586 47.539 2 0.14907124152672072 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2', 'nc|ENSG00000149930|Q9UL54-2|TAOK2', 'nc|ENSG00000149930|Q9UL54-4|TAOK2'] 132681 10502 VYRQDCETF True PC9_epitope_Rep3 1159.4968089360298 1159.49570993586 45.335 2 0.14906752677677865 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1', 'PPHLN1|p.E302K|2|0.37|ENSG00000134283|chr12:42398989-42398989|G/A|missense_variant'] 96310 7919 SEETPLTAA True H1975_Epitope_Rep3 917.4341915961298 917.43308993586 35.43 2 0.14906643077898468 0.0009665231526227924 0.9438714419765777 ['ENSG00000182154|ENST00000371443|MRPL41'] 104041 19003 SRSWLSYSY True PC9_epitope_Rep5 1147.5298233164701 1147.5287299358602 78.122 2 0.14906292903106272 0.0009665231526227924 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3'] 97664 19610 SHDEVFVVL True PC9_epitope_Rep2 1043.52876068731 1043.52766993586 80.814 2 0.14906078036270667 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 99364 11004 SLDVGGPLRY True H1975_Epitope_Rep2 1075.56620882519 1075.5651099358602 47.354 2 0.14904969157805978 0.0009665231526227924 0.9438714419765777 ['ENSG00000176894|ENST00000317479|PXMP2'] 84737 13969 QHGGFVVTV True PC9_epitope_Rep5 942.4923156089399 942.49120993586 58.755 2 0.14904966875283604 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 48689 5790 KEMEKSFEV True H1975_Epitope_Rep3 1125.5376111188498 1125.53596490379 27.295 3 0.14904837184473052 0.0009665231526227924 0.9438714419765777 ['ENSG00000091527|ENST00000264993|CDV3'] 99612 20337 SLFPGKLEVV True PC9_epitope_Rep5 1087.62774645259 1087.62664993586 83.261 2 0.14904823845403248 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 98599 10515 SINPDEAVAY True H1975_Epitope_Rep3 1077.4978544818498 1077.49727496793 45.509 1 0.1490467447728985 0.0009665231526227924 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 27982 14889 FQTEGKLYL True PC9_epitope_Rep4 1097.5757108797297 1097.57460993586 65.209 2 0.14904643513779114 0.0009665231526227924 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'ENST00000474934.1_1_1:26877949-26879989:+|nuORF', 'ENST00000527264.5_1_1:26873736-26880810:+|nuORF', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 29251 17878 FVDEYDPTI True PC9_epitope_Rep6 1097.49170647225 1097.49117496793 81.394 1 0.14904365173667855 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 105990 12986 SVLKSIQEV True PC9_epitope_Rep2 1001.57571087973 1001.5746099358599 55.239 2 0.14903816177193713 0.0009665231526227924 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 26077 11918 FHEGDAYVV True PC9_epitope_Rep2 1035.4661604307498 1035.4650699358601 51.166 2 0.14903374313557907 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 43518 10885 IIDENGVHEL True PC9_epitope_Rep6 1137.56660274801 1137.56550993586 52.732 2 0.1490260991926672 0.0009665231526227924 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 93453 8929 RSDTPLIY True H1975_Epitope_Rep2 963.5025459394699 963.50144993586 39.307 2 0.1490254542523079 0.0009665231526227924 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 105868 15849 SVKNGFLTI True PC9_epitope_Rep4 977.55458151233 977.55348993586 68.888 2 0.14902401760334133 0.0009665231526227924 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 88223 13826 QYASRFVQL True PC9_epitope_Rep6 1110.5821932425 1110.58108993586 64.988 2 0.14901591448307736 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000142731|O00444-2|PLK4', 'ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-3|PLK4', 'ENST00000507454.1_1_4:128812246-128813710:+|nuORF'] 88669 8087 RAYDGTTYL True H1975_Epitope_Rep2 1058.50327421546 1058.5021699358601 36.053 2 0.14900510891182278 0.0009665231526227924 0.9438714419765777 ['ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39'] 39128 16284 HLDLGILYY True H1975_Epitope_Rep3 1105.58079626017 1105.5796899358602 68.106 2 0.14899393883935097 0.0009665231526227924 0.9438714419765777 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 26056 12081 FHDNSGDVF True PC9_epitope_Rep1 1036.4250238947598 1036.42392993586 51.33 2 0.14899348946494753 0.0009665231526227924 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 31469 8539 GEEIGAEMA True H1975_Epitope_Rep2 905.3800478482899 905.3794949679301 37.8 1 0.14899346369138142 0.0009665231526227924 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 124805 18331 VLLGKVYVV True PC9_epitope_Rep2 988.63210355704 988.63100993586 75.839 2 0.14899326907967042 0.0009665231526227924 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24|p.G413S|1|0.3|ENSG00000114796|chr3:183671046-183671046|G/A|missense_variant'] 96764 8426 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 37.362 1 0.1489853463947396 0.0009665231526227924 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 109335 10542 TGHLEEVVL True NCI_RA007_Epitope_Rep2 995.52876068731 995.52766993586 45.603 2 0.1489732193468038 0.0009665231526227924 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 123286 16133 VHSEQVFAL True PC9_epitope_Rep1 1028.5290950404797 1028.5279899358602 66.871 2 0.14897103369203615 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 89710 11432 REYPNLVTI True NCI_RA007_Epitope_Rep5 1103.59750895347 1103.59640993586 50.622 2 0.14896962399300592 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110'] 104253 12901 SSDPFLNSGTY True H1975_Epitope_Rep2 1186.51423282198 1186.5131299358602 54.736 2 0.14896485437205229 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000137693|P46937-4|YAP1', 'nc|ENSG00000137693|P46937-5|YAP1', 'nc|ENSG00000137693|P46937-3|YAP1', 'nc|ENSG00000137693|P46937-6|YAP1', 'nc|ENSG00000137693|P46937-7|YAP1', 'nc|ENSG00000137693|P46937-2|YAP1', 'nc|ENSG00000137693|P46937-8|YAP1', 'ENSG00000137693|ENST00000282441|YAP1', 'nc|ENSG00000137693|P46937-9|YAP1'] 96155 5059 SEEEGVPST True H1975_Epitope_Rep2 933.39272070697 933.39217496793 24.541 1 0.14896342313490157 0.0009665231526227924 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 5165 7843 ALPDQGIAKA True PC9_epitope_Rep4 982.5447451046199 982.54364993586 37.581 2 0.14896145360705515 0.0009665231526227924 0.9438714419765777 ['ENSG00000089289|ENST00000356413|IGBP1'] 1538 6565 AEETPPTSV True H1975_Epitope_Rep2 929.43419159613 929.43308993586 30.163 2 0.14895776828551463 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 26170 15345 FHQPDSVIL True PC9_epitope_Rep2 1054.54474510462 1054.54364993586 64.304 2 0.14895139169994098 0.0009665231526227924 0.9438714419765777 ['ENSG00000133056|ENST00000684373|PIK3C2B', 'PIK3C2B|p.R970Pfs*17|1|0.25|ENSG00000133056|chr1:204443543-204443556|CAGATACTGGTAGC/-|frameshift_variant'] 102885 12822 SQIALNEKL True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 54.341 2 0.14894857391980704 0.0009665231526227924 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F'] 28946 8815 FTEQYNEQY True H1975_Epitope_Rep1 1220.4985827578398 1220.4974899358601 38.829 2 0.14894850242032376 0.0009665231526227924 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 138460 21008 YRFLIQNVL True PC9_epitope_Rep2 1164.6655289436399 1164.6644299358602 86.26 2 0.14893621687577163 0.0009665231526227924 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000472894.1_1_9:95018893-95021273:-|nuORF'] 94470 15329 RYGLVTNEI True PC9_epitope_Rep1 1063.56620882519 1063.5651099358602 63.782 2 0.14893196656322186 0.0009665231526227924 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 115120 19802 TTYEGIFKTL True PC9_epitope_Rep2 1171.6124903112698 1171.6113899358602 81.558 2 0.1489184694807348 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 72206 8361 MRSPQMVSA True PC9_epitope_Rep3 1005.47357139365 1005.47246993586 37.13 2 0.14891491593219328 0.0009665231526227924 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 106660 22844 SYADQMFLL True PC9_epitope_Rep2 1086.50558271458 1086.5050749679299 93.36 1 0.14891265639755863 0.0009665231526227924 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 89314 8842 RELVKNWVP True H1975_Epitope_Rep3 1139.64512785223 1139.64402993586 39.017 2 0.14890936926698278 0.0009665231526227924 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 138189 14980 YQQQQSLAL True PC9_epitope_Rep5 1077.54547338061 1077.54436993586 62.624 2 0.14890545299158991 0.0009665231526227924 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 103105 21120 SQLPNFWKL True PC9_epitope_Rep5 1131.60767971435 1131.60658993586 86.298 2 0.14889903225497741 0.0009665231526227924 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 32429 7473 GGGSIEVSVPR True H1975_Epitope_Rep1 1056.55637241748 1056.55526993586 33.743 2 0.1488957697107073 0.0009665231526227924 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3', 'nc|ENSG00000107164|Q96I24-2|FUBP3', 'ENST00000487406.2_1_9:133495824-133506568:+|nuORF'] 54345 9231 KYQEVTNNL True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 40.448 2 0.14889189736828098 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 83010 22701 PYISNIYLI True PC9_epitope_Rep1 1094.60119735158 1094.60067496793 92.123 1 0.1488907225057388 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 59821 19346 LHDISSLL True PC9_epitope_Rep1 896.49673228304 896.49562993586 79.219 2 0.14888909631473515 0.0009665231526227924 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 38143 9176 HEQLTVAEI True H1975_Epitope_Rep1 1038.53457434374 1038.53346993586 40.201 2 0.14888451533593808 0.0009665231526227924 0.9438714419765777 ['ENSG00000167553|ENST00000301072|TUBA1C'] 71827 21703 MPALGWAVA True PC9_epitope_Rep1 914.4684093602199 914.46730993586 88.312 2 0.14888296248177654 0.0009665231526227924 0.9438714419765777 ['AOC1|p.L708Wfs*7|1|0.34|ENSG00000002726|chr7:150861073-150861073|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 64541 8461 LRDENVNVV True PC9_epitope_Rep2 1056.5563724174801 1056.55526993586 37.913 2 0.14887759990816213 0.0009665231526227924 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 40392 18317 HRTEMDWVL True PC9_epitope_Rep5 1185.5600778989299 1185.5589899358602 75.471 2 0.1488775073542798 0.0009665231526227924 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 114417 9268 TSDTLNNVGY True H1975_Epitope_Rep3 1082.48801807414 1082.48747496793 40.641 1 0.14887687683753092 0.0009665231526227924 0.9438714419765777 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 123073 17367 VHAELADVL True PC9_epitope_Rep3 965.5181960036099 965.51708993586 71.973 2 0.1488753973056559 0.0009665231526227924 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 139099 10543 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.52184993586 45.575 2 0.14886973598008152 0.0009665231526227924 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 21637 16825 ERTLATDIL True PC9_epitope_Rep5 1030.56587447202 1030.56476993586 69.727 2 0.14885959702536677 0.0009665231526227924 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 54411 8355 KYSLIKGNF True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 38.95 2 0.1488495573498414 0.0009665231526227924 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 118998 16439 VEFLEPLEA True H1975_Epitope_Rep3 1045.5331773614098 1045.53267496793 68.715 1 0.14884890559145006 0.0009665231526227924 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 77502 10857 NYQGHFHLF True NCI_RA007_Epitope_Rep4 1161.5355774032498 1161.5344899358602 48.612 2 0.14884581178826453 0.0009665231526227924 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 42237 3554 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 18.633 2 0.14884283355313122 0.0009665231526227924 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 6641 20660 APYPGFLSV True PC9_epitope_Rep4 949.49091862661 949.48982993586 87.626 2 0.14884254623098225 0.0009665231526227924 0.9438714419765777 ['ENSG00000160447|ENST00000291906|PKN3'] 25442 15458 FELPQTPLA True H1975_Epitope_Rep2 1014.5385970950199 1014.53807496793 64.616 1 0.14883745434555043 0.0009665231526227924 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 26768 18818 FLDPRPLTV True PC9_epitope_Rep1 1056.59678067748 1056.59568993586 77.17 2 0.1488279673610415 0.0009665231526227924 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 7200 14816 ARDETEFYL True PC9_epitope_Rep6 1142.5244035828598 1142.5233099358602 68.961 2 0.14882786540710394 0.0009665231526227924 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 47511 14372 IYLLIHNNF True NCI_RA007_Epitope_Rep1 1145.62332977849 1145.62222993586 59.944 2 0.14882408789907187 0.0009665231526227924 0.9438714419765777 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 737 9917 AAVPRAAFL True H1975_Epitope_Rep1 914.5337864980999 914.53268993586 43.081 2 0.1488224585160303 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 3962 18348 AHEGSIFAL True PC9_epitope_Rep1 943.4763311916299 943.4752299358599 75.364 2 0.1488111556128118 0.0009665231526227924 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 103672 6919 SRDPSVIET True PC9_epitope_Rep3 1002.49818883502 1002.49708993586 31.626 2 0.14880736111070833 0.0009665231526227924 0.9438714419765777 ['ENSG00000172469|ENST00000358812|MANEA'] 130815 20531 VVFEIQGTTV True PC9_epitope_Rep2 1091.58627556343 1091.5851699358602 84.405 2 0.14879970604766612 0.0009665231526227924 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 39766 11811 HQADIGEYV True PC9_epitope_Rep2 1030.47197408718 1030.47086993586 50.762 2 0.14879708473716752 0.0009665231526227924 0.9438714419765777 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7', 'ENST00000562523.1_1_16:69375146-69375552:+|nuORF'] 138062 5199 YQDTHPERL True PC9_epitope_Rep1 1157.5465360097699 1157.54488490379 24.848 3 0.1487926896485863 0.0009665231526227924 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 96636 6065 SENEYIM[Oxidation]KA True H1975_Epitope_Rep3 1099.4855759264299 1099.48446993586 28.34 2 0.14878458320023666 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 73735 19984 NHALPVYVF True PC9_epitope_Rep3 1058.5549158654999 1058.55380993586 82.113 2 0.148779903106193 0.0009665231526227924 0.9438714419765777 ['ENST00000481597.5_1_3:50356335-50357944:-|nuORF', 'ENSG00000068001|ENST00000357750|HYAL2'] 118817 8226 VEEFKSIPA True H1975_Epitope_Rep2 1018.5335117145798 1018.53240993586 36.592 2 0.14877722448101371 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'ENST00000493695.1_1_3:160132272-160134257:+|nuORF'] 7276 11057 ARPPGYEF True PC9_epitope_Rep5 935.45011644379 935.44900993586 47.518 2 0.14876419705778535 0.0009665231526227924 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 65065 9994 LSDLGKLSY True H1975_Epitope_Rep2 994.5335117145801 994.53240993586 43.432 2 0.1487517510190557 0.0009665231526227924 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 104768 4520 STDPAAPNLK True NCI_RA007_Epitope_Rep5 1012.5189242796 1012.51782993586 24.04 2 0.14874894065985947 0.0009665231526227924 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 89449 8441 REQDLPLAEA True H1975_Epitope_Rep2 1140.5775017848798 1140.57640993586 37.419 2 0.14874295654104927 0.0009665231526227924 0.9438714419765777 ['ENSG00000169895|ENST00000380155|SYAP1'] 133528 16923 WHHTFYNEL True PC9_epitope_Rep3 1245.55670677065 1245.55560993586 70.251 2 0.14873313291304396 0.0009665231526227924 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 101535 14995 SPAPPLLHV True PC9_epitope_Rep2 929.53345214493 929.53234993586 62.935 2 0.14873158414436027 0.0009665231526227924 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 38500 6367 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 29.516 2 0.14873090036474593 0.0009665231526227924 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 1864 9982 AEIETELQA True H1975_Epitope_Rep3 1002.4869554449798 1002.48584993586 43.431 2 0.14872955568587154 0.0009665231526227924 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A'] 31345 8949 GEALPHVVP True H1975_Epitope_Rep1 917.49706663621 917.49596993586 39.326 2 0.148726336908115 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 123406 8763 VIDPVAPRY True H1975_Epitope_Rep3 1028.5654805492 1028.5643899358602 38.713 2 0.1487245505801167 0.0009665231526227924 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 48404 4275 KEDKPPLAP True H1975_Epitope_Rep2 993.5494961318898 993.54838993586 21.558 2 0.1487244466492379 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 86954 9474 QRVDSPVTV True PC9_epitope_Rep1 999.5349086969098 999.53380993586 41.299 2 0.14871809736341307 0.0009665231526227924 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 114294 8721 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.58478993586 40.337 2 0.14871762274742803 0.0009665231526227924 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 48752 6316 KEQEPMPTV True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 29.23 2 0.14870659094244848 0.0009665231526227924 0.9438714419765777 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2', 'WDR18-HN1L|1|fusion'] 77214 11534 NYIDKVRFL True NCI_RA007_Epitope_Rep5 1166.64479349906 1166.64313490379 51.016 3 0.14870498597041582 0.0009665231526227924 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 47780 12309 IYQRDPLKL True PC9_epitope_Rep5 1144.6604435631998 1144.65880490379 52.337 3 0.1487036271425808 0.0009665231526227924 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 11763 15694 DHIHIIAL True PC9_epitope_Rep2 930.52870111766 930.52760993586 65.643 2 0.14870309126850248 0.0009665231526227924 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 120255 16582 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 68.608 2 0.14868335917440276 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 83705 5818 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 27.37 2 0.14868225488495299 0.0009665231526227924 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 28826 11681 FTDIDGQVY True H1975_Epitope_Rep1 1056.4763907612798 1056.47587496793 49.92 1 0.14867466490446088 0.0009665231526227924 0.9438714419765777 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 70901 10659 MEIQVNGGTVA True H1975_Epitope_Rep2 1117.5437591284501 1117.5426699358602 46.024 2 0.14867079576530104 0.0009665231526227924 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000413027.1_1_6:31248141-31248948:+|nuORF'] 104230 11314 SSDNIMVQY True H1975_Epitope_Rep2 1055.45936079815 1055.45826993586 48.566 2 0.14867042483034815 0.0009665231526227924 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 113089 18538 TPYNYPVPV True PC9_epitope_Rep4 1048.5229470308798 1048.52184993586 79.381 2 0.148667807124083 0.0009665231526227924 0.9438714419765777 ['ENSG00000170906|ENST00000485876|NDUFA3'] 3882 10527 AHDDGRWSL True PC9_epitope_Rep3 1055.47845644995 1055.47734993586 45.432 2 0.1486629343366957 0.0009665231526227924 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 88504 10125 RADDTFEAL True NCI_RA007_Epitope_Rep1 1036.48253877088 1036.4814499358602 43.395 2 0.14865663935613657 0.0009665231526227924 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 23005 14979 EVISKLYAV True PC9_epitope_Rep4 1020.5855472874398 1020.5849749679301 65.555 1 0.14865623583643425 0.0009665231526227924 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 126921 9242 VPVDTGVAA True PC9_epitope_Rep4 827.4388830537498 827.43833496793 43.147 1 0.1486530164760456 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 52315 12430 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54290993586 52.838 2 0.14864534618322978 0.0009750720705443446 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 12182 10402 DILIQYDR True H1975_Epitope_Rep3 1034.53965972418 1034.53856993586 45.068 2 0.14864360578197036 0.0009750720705443446 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000339471.8_1_19:39923915-39924228:-|nuORF', 'ENST00000602153.5_1_19:39923915-39924074:-|nuORF', 'ENST00000599705.1_1_19:39923915-39924331:-|nuORF', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 57026 2726 LEEERTPTP True H1975_Epitope_Rep2 1070.52440358286 1070.5233099358602 14.568 2 0.1486428948057332 0.0009750720705443446 0.9438714419765777 ['ENSG00000086504|ENST00000199706|MRPL28', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 135280 15919 YAYTGVLQL True H1975_Epitope_Rep1 1026.53859709502 1026.53807496793 66.544 1 0.14863632028003795 0.0009750720705443446 0.9438714419765777 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4', 'KLHL4|p.Q238H|1|0.86|ENSG00000102271|chrX:87614557-87614557|G/T|missense_variant'] 30186 22096 FYVDSDMVNEF True PC9_epitope_Rep5 1364.5594687622395 1364.5583699358601 90.024 2 0.1486314406513183 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 139809 20108 YVDDQLFVFY True H1975_Epitope_Rep3 1307.60740493083 1307.60630993586 84.136 2 0.1486288395722685 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000010704|Q30201-10|HFE', 'nc|ENSG00000010704|Q30201-7|HFE', 'nc|ENSG00000010704|Q30201-8|HFE', 'nc|ENSG00000010704|Q30201-5|HFE', 'nc|ENSG00000010704|Q30201-3|HFE', 'ENSG00000010704|ENST00000357618|HFE', 'nc|ENSG00000010704|Q30201-9|HFE', 'ENST00000486147.1_1_6:26087668-26093021:+|nuORF', 'ENST00000483782.1_1_6:26087668-26091517:+|nuORF'] 48812 5007 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 24.342 2 0.14862841431786758 0.0009750720705443446 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 35035 7670 GRDENSVEL True PC9_epitope_Rep1 1017.4727023631699 1017.47160993586 34.324 2 0.14862823534557906 0.0009750720705443446 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 115691 17540 TVLEEIGNRV True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 72.262 2 0.14862692650722525 0.0009750720705443446 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 2206 5913 AENPKLISA True H1975_Epitope_Rep3 941.5181960036099 941.51708993586 27.754 2 0.1486267539530464 0.0009750720705443446 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 24373 7522 FAEHNDLQY True H1975_Epitope_Rep1 1135.4934378077498 1135.49287496793 33.931 1 0.1486229857991282 0.0009750720705443446 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 72171 16071 MRMLAEDEL True PC9_epitope_Rep2 1106.51001647202 1106.5089099358602 67.074 2 0.14861937024504415 0.0009750720705443446 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 39878 21727 HQILTPFLL True PC9_epitope_Rep1 1080.6331661862 1080.63206993586 88.404 2 0.14861922168270972 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 28844 10182 FTDPGQVAY True H1975_Epitope_Rep1 996.4552613938799 996.45471496793 44.104 1 0.14861343250687117 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 39371 11269 HLVDEPQNLIK True PC9_epitope_Rep4 1304.7088503076 1304.7077499358602 51.122 2 0.14860527542330182 0.0009750720705443446 0.9438714419765777 ['CON__P02769'] 88239 19835 QYEEQFVTL True PC9_epitope_Rep4 1155.5448046742697 1155.54370993586 84.426 2 0.14860398325694713 0.0009750720705443446 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 90402 5915 RILSGVVTK True NCI_RA007_Epitope_Rep4 971.61276509479 971.61166993586 29.374 2 0.14860038507008622 0.0009750720705443446 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 67239 16418 LTDLVDDNYF True H1975_Epitope_Rep2 1213.5502839775302 1213.54977496793 68.372 1 0.14859911017649424 0.0009750720705443446 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 9046 20092 AVIPRLVQL True PC9_epitope_Rep1 1007.64915060351 1007.64804993586 82.112 2 0.14859448024011834 0.0009750720705443446 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 47565 22170 IYM[Oxidation]DTLNIF True PC9_epitope_Rep1 1144.547447907 1144.54634993586 90.094 2 0.14859364413426657 0.0009750720705443446 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 9189 18483 AVPEIMDRI True PC9_epitope_Rep1 1042.5481162329 1042.5470099358602 75.885 2 0.14858638050546102 0.0009750720705443446 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 1007 6426 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.4179949679301 29.637 1 0.14858605013360415 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 107084 15509 SYMEVPTYL True NCI_RA007_Epitope_Rep3 1101.50524836141 1101.5041499358601 68.565 2 0.14858313786508018 0.0009750720705443446 0.9438714419765777 ['ENSG00000162511|ENST00000294507|LAPTM5'] 84222 5453 QEVAQVASA True H1975_Epitope_Rep2 901.4505103666098 901.4499649679301 26.003 1 0.14857395579058622 0.0009750720705443446 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 139972 22085 YVITDLTQL True PC9_epitope_Rep1 1064.57537652656 1064.5748749679299 89.761 1 0.14857375476718745 0.0009750720705443446 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 49081 6725 KFVETHPEF True NCI_RA007_Epitope_Rep3 1132.5553097883198 1132.5542099358602 33.541 2 0.14856942705176557 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000093072|Q9NZK5-2|ADA2', 'ENSG00000093072|ENST00000399837|ADA2'] 101903 12506 SPLLLQAKA True PC9_epitope_Rep1 939.5753169569099 939.57420993586 52.973 2 0.14856940602102742 0.0009750720705443446 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 88672 7745 RAYTSETYL True H1975_Epitope_Rep3 1102.5294889632999 1102.52838993586 34.773 2 0.1485667977870205 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 14046 8496 DSDFRKDDFY True H1975_Epitope_Rep1 1306.5465955794198 1306.5454899358601 37.609 2 0.14856654444933734 0.0009750720705443446 0.9438714419765777 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 116834 12756 TYMKDLYQL True NCI_RA007_Epitope_Rep2 1173.5739966275698 1173.57288993586 54.236 2 0.14856526514031906 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 131897 4453 VYEGERPLTK True NCI_RA007_Epitope_Rep1 1190.6295373577398 1190.62789490379 21.43 3 0.14856411769350686 0.0009750720705443446 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 14439 7915 DTLYEAVR True NCI_RA007_Epitope_Rep5 965.4818104948899 965.48070993586 37.137 2 0.1485581158616975 0.0009750720705443446 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF', 'ENST00000490335.4_1_6:35436211-35436651:+|nuORF'] 139644 14993 YTSDYFISY True H1975_Epitope_Rep3 1157.49170647225 1157.4906099358602 63.06 2 0.14855758655785203 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 15963 7482 EDVFVHQTAIK True NCI_RA007_Epitope_Rep2 1285.6666511424498 1285.66501490379 33.731 3 0.1485453481364655 0.0009750720705443446 0.9438714419765777 ['ENSG00000065978|ENST00000321358|YBX1', 'ENSG00000006047|ENST00000007699|YBX2', 'nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3', 'nc|ENSG00000060138|P16989-2|YBX3'] 89070 9616 REELSNVLAA True H1975_Epitope_Rep2 1100.5825871653199 1100.5814899358602 41.966 2 0.14854156172591473 0.0009750720705443446 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 40847 12357 HVLEEVQQV True PC9_epitope_Rep5 1079.56112344475 1079.56002993586 52.527 2 0.148530232708923 0.0009750720705443446 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 124559 21739 VLGNLEITYV True PC9_epitope_Rep1 1119.61757569171 1119.61646993586 88.452 2 0.14852686556718203 0.0009750720705443446 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR', 'nc|ENSG00000146648|P00533-2|EGFR', 'nc|ENSG00000146648|P00533-4|EGFR', 'nc|ENSG00000146648|P00533-3|EGFR'] 60650 8586 LITPAVVSER True NCI_RA007_Epitope_Rep5 1083.62880908175 1083.6277099358601 39.706 2 0.14852550966887518 0.0009750720705443446 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 70281 19364 LYPDHFHLL True PC9_epitope_Rep3 1153.59202965021 1153.5903749037902 79.707 3 0.14852264842961338 0.0009750720705443446 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 76109 6450 NRPGTVSSL True PC9_epitope_Rep3 929.49304388493 929.49194993586 29.835 2 0.14851527815269105 0.0009750720705443446 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 113841 12569 TREEGTPLTL True PC9_epitope_Rep5 1115.5822528121498 1115.5811499358601 53.346 2 0.14851203215705058 0.0009750720705443446 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 17430 13753 EHFPQAYSV True PC9_epitope_Rep3 1076.49270953176 1076.4916099358602 57.982 2 0.14850838672805547 0.0009750720705443446 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 11868 14535 DHNINLVSM True PC9_epitope_Rep6 1041.4913296327702 1041.49022993586 67.803 2 0.14850787843442825 0.0009750720705443446 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 92276 12051 RQLEDTVAL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 54.159 2 0.14850224384658178 0.0009750720705443446 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 109516 19475 THADFVLEM True PC9_epitope_Rep5 1061.4851816231699 1061.48408993586 79.963 2 0.14850199795602834 0.0009750720705443446 0.9438714419765777 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 94552 9530 RYIPTAAAF True NCI_RA007_Epitope_Rep3 1008.5392658013599 1008.53816993586 44.574 2 0.14849811799338863 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 65230 8257 LSEDYGVLK True H1975_Epitope_Rep1 1022.5284263341399 1022.5273299358599 36.699 2 0.14849204304967423 0.0009750720705443446 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF'] 89340 7052 REM[Oxidation]EENFAV True H1975_Epitope_Rep2 1139.49172393603 1139.4906299358602 32.052 2 0.14848794188181022 0.0009750720705443446 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 199 9719 AAFEKALEV True NCI_RA007_Epitope_Rep3 976.5229470308798 976.52184993586 45.301 2 0.14848567355363934 0.0009750720705443446 0.9438714419765777 ['ENSG00000152778|ENST00000371795|IFIT5'] 76650 12603 NTIESLKDV True PC9_epitope_Rep5 1017.5342399905699 1017.53314993586 53.477 2 0.1484816953747118 0.0009750720705443446 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 113988 19396 TRLPEFSEL True PC9_epitope_Rep3 1090.56587447202 1090.56476993586 79.83 2 0.14847757487158128 0.0009750720705443446 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 75375 11488 NQDDSILKV True PC9_epitope_Rep6 1030.5294889632999 1030.52838993586 55.263 2 0.14847751875019183 0.0009750720705443446 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 75997 21176 NRIQDLLEL True PC9_epitope_Rep3 1112.61897267404 1112.6178699358602 86.741 2 0.1484738537542185 0.0009750720705443446 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 32605 8238 GHDASQITL True PC9_epitope_Rep6 940.46140940348 940.46030993586 41.271 2 0.14846872790891008 0.0009750720705443446 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 105335 8207 STVNVILGK True NCI_RA007_Epitope_Rep5 929.5545815123298 929.55348993586 38.248 2 0.14846560954146207 0.0009750720705443446 0.9438714419765777 ['ADGRF5|p.W968Gfs*8|1|0.1|ENSG00000069122|chr6:46859002-46859002|C/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 54331 6838 KYQEVTNNL True NCI_RA007_Epitope_Rep1 1107.5560380643099 1107.5549499358601 30.603 2 0.1484634484616836 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 132058 18162 VYIHPSSALF True PC9_epitope_Rep2 1132.59169529704 1132.5905899358602 75.164 2 0.1484621665685567 0.0009750720705443446 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8'] 31890 5587 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 26.53 1 0.14846067279047406 0.0009750720705443446 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 117022 15118 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.52387496793 66.079 1 0.14846055939526465 0.0009750720705443446 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 109822 18331 THLEGVLLL True PC9_epitope_Rep6 993.5858816406098 993.58478993586 83.152 2 0.1484557521027466 0.0009750720705443446 0.9438714419765777 ['ENSG00000204839|ENST00000398882|MROH6', 'MROH6|p.H353Lfs*180|1|0.11|ENSG00000204839|chr8:143570026-143570051|GAGGCCTCGCAGGTGGTGGTCGGCAT/-|frameshift_variant'] 7492 13316 ASEDSVLLY True H1975_Epitope_Rep2 995.4811417885501 995.4805949679301 56.35 1 0.1484498053386657 0.0009750720705443446 0.9438714419765777 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 21787 6577 ESDINSVRY True H1975_Epitope_Rep2 1081.50400249145 1081.50290993586 30.209 2 0.14844723658321335 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000559541.1_1_15:52416976-52428016:-|nuORF'] 130470 17312 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 71.593 2 0.14844679893384946 0.0009750720705443446 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 94728 10510 RYLEVMRKL True PC9_epitope_Rep4 1206.6906981456598 1206.68905490379 48.149 3 0.14844383026266897 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 84532 9382 QHADPPVQI True PC9_epitope_Rep2 1003.50869394907 1003.50758993586 41.425 2 0.14844091395889078 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 107781 19643 TAM[Oxidation]DVVYAL True PC9_epitope_Rep5 997.4790339940099 997.47792993586 80.611 2 0.14843545818519824 0.0009750720705443446 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 135629 8336 YEEQPGLQP True H1975_Epitope_Rep2 1059.4872897981497 1059.48618993586 37.017 2 0.14843507247848758 0.0009750720705443446 0.9438714419765777 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 315 19489 AAIEIFEKV True PC9_epitope_Rep1 1018.5698972232999 1018.56880993586 79.782 2 0.148431061304255 0.0009750720705443446 0.9438714419765777 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 96261 9126 SEEPLLHVA True H1975_Epitope_Rep3 993.51311062317 993.51200993586 40.093 2 0.14843002759350113 0.0009750720705443446 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.N341Ifs*23|1|0.12|ENSG00000130589|chr20:63569211-63569214|TAGT/-|frameshift_variant', 'HELZ2|p.V187F|1|0.26|ENSG00000130589|chr20:63570515-63570515|C/A|missense_variant'] 17458 19186 EHGNFLITV True PC9_epitope_Rep1 1028.52909504048 1028.52857496793 78.594 1 0.14842666372007418 0.0009750720705443446 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 65367 10355 LSEPSSLQY True H1975_Epitope_Rep1 1022.49204082542 1022.4909499358599 44.778 2 0.14842371503547352 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 114151 7097 TRSPVKVTL True PC9_epitope_Rep4 999.60767971435 999.60658993586 34.565 2 0.1484201993076064 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 76805 10862 NVELDPEIQ True NCI_RA007_Epitope_Rep4 1055.51350454599 1055.5124099358602 48.631 2 0.14841978957839636 0.0009750720705443446 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 52625 10934 KQDSAFSNL True PC9_epitope_Rep5 1008.48762415132 1008.48652993586 47.047 2 0.14841224122657662 0.0009750720705443446 0.9438714419765777 ['ENSG00000071553|ENST00000369762|ATP6AP1'] 40386 18729 HRTEMDWVL True PC9_epitope_Rep3 1185.5600778989299 1185.55843490379 77.264 3 0.14840772238598435 0.0009750720705443446 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 94351 10964 RYAEAVQLL True NCI_RA007_Epitope_Rep5 1061.58694426977 1061.58584993586 48.809 2 0.14840629485720386 0.0009750720705443446 0.9438714419765777 ['TTC30B|p.A478Cfs*6|1|0.11|ENSG00000196659|chr2:177551332-177551333|-/A|frameshift_variant', 'TTC30A|p.A478Cfs*6|1|0.12|ENSG00000197557|chr2:177617270-177617271|-/A|frameshift_variant', 'ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 8262 4929 ATIQGAYAR True NCI_RA007_Epitope_Rep2 949.4981292653698 949.49702993586 23.794 2 0.14840570807401254 0.0009750720705443446 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 76112 5125 NRPGTVSSL True PC9_epitope_Rep4 929.49304388493 929.49194993586 26.37 2 0.14840309595811096 0.0009750720705443446 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 140868 17599 YYTPITPHL True PC9_epitope_Rep2 1103.56514619603 1103.56404993586 72.972 2 0.14839638311192835 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 3880 9047 AHDDGRWSL True PC9_epitope_Rep2 1055.47845644995 1055.47734993586 40.147 2 0.14839496070648292 0.0009750720705443446 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 90732 6094 RKQATAIVL True NCI_RA007_Epitope_Rep4 998.6236641316598 998.62256993586 30.056 2 0.1483945384855547 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000091157|Q9Y4E6-2|WDR7', 'ENSG00000091157|ENST00000254442|WDR7'] 108405 8313 TEEDHPFAV True H1975_Epitope_Rep3 1043.45598966987 1043.4548899358601 36.96 2 0.14839438118737142 0.0009750720705443446 0.9438714419765777 ['FOXK2-TBCD|1|fusion', 'ENSG00000141556|ENST00000355528|TBCD', 'nc|ENSG00000141556|Q9BTW9-4|TBCD', 'ENST00000573364.1_1_17:80890567-80895237:+|nuORF', 'nc|ENSG00000141556|Q9BTW9-2|TBCD', 'ENST00000576677.5_1_17:80888388-80900336:+|nuORF', 'ENST00000576603.5_1_17:80889830-80900336:+|nuORF', 'FOXK2-TBCD|3|fusion', 'FOXK2-TBCD|2|fusion'] 11735 8230 DHHENKYLL True PC9_epitope_Rep3 1167.56727145435 1167.56563490379 36.635 3 0.14839357371456993 0.0009750720705443446 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 7268 11060 ARPPGYEF True PC9_epitope_Rep1 935.45011644379 935.44900993586 47.431 2 0.1483935725635039 0.0009750720705443446 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 126657 7440 VPQTPLHTA True PC9_epitope_Rep5 962.5185303567798 962.51742993586 33.572 2 0.14839298725063554 0.0009750720705443446 0.9438714419765777 ['MAPKAPK3|p.D345Tfs*5|1|0.16|ENSG00000114738|chr3:50647930-50647930|G/-|frameshift_variant', 'ENSG00000114738|ENST00000621469|MAPKAPK3'] 71124 19201 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.5514299358601 79.696 2 0.1483890048703746 0.0009750720705443446 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 45994 10745 ISTEVNPKL True PC9_epitope_Rep5 999.56006081559 999.55896993586 46.322 2 0.14838833867769524 0.0009750720705443446 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 42325 9956 IELAYEQVAKA True H1975_Epitope_Rep1 1233.6605031328497 1233.6594099358601 43.232 2 0.14838627974156657 0.0009750720705443446 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 94910 14385 RYPDRITLI True PC9_epitope_Rep2 1145.65569253593 1145.65405490379 60.593 3 0.148376165995233 0.0009750720705443446 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 4425 20654 AIVDLIHDI True PC9_epitope_Rep4 1007.5651461960299 1007.56404993586 87.603 2 0.14836709250953226 0.0009750720705443446 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 90956 7802 RLFVGSIPK True NCI_RA007_Epitope_Rep5 1015.6178504752298 1015.61674993586 36.712 2 0.14836460997066367 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 1103 6435 AEAPPGVET True H1975_Epitope_Rep3 869.41306222873 869.4125149679301 29.728 1 0.1483607080107615 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 103556 9390 SRDDTTLNAL True PC9_epitope_Rep6 1104.54111627616 1104.54000993586 46.318 2 0.1483583993213768 0.0009750720705443446 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 94789 11439 RYLQTLTTI True NCI_RA007_Epitope_Rep1 1107.62880908175 1107.6277099358601 48.459 2 0.14835221146478023 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000148175|P27105-2|STOM', 'ENSG00000148175|ENST00000286713|STOM'] 115694 16008 TVLEEIGNRV True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 69.508 2 0.1483453736110179 0.0009750720705443446 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2', 'ENST00000561077.1_1_15:59397440-59406659:+|nuORF'] 29285 10298 FVDKNNDLLY True H1975_Epitope_Rep3 1239.61355294043 1239.61244993586 44.665 2 0.14834032929757446 0.0009750720705443446 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 71305 20927 MHDFNLISI True PC9_epitope_Rep5 1088.53246616876 1088.53136993586 85.553 2 0.14833604864607308 0.0009750720705443446 0.9438714419765777 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 95644 11666 SAVPPGTSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 50.204 2 0.1483275972971788 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 114220 8615 TRVSQINTL True PC9_epitope_Rep2 1030.5771078620598 1030.5760099358602 38.499 2 0.14832475628321157 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 138341 9713 YRAQPSVSL True PC9_epitope_Rep4 1019.5399940773499 1019.53888993586 44.997 2 0.14832234676845263 0.0009750720705443446 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 56957 4763 LEDVSKPPA True H1975_Epitope_Rep2 954.5022115863 954.50110993586 23.409 2 0.14832167044700995 0.0009750720705443446 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 106166 11255 SVPEFPLSPPK True NCI_RA007_Epitope_Rep3 1196.6441247927198 1196.64302993586 51.386 2 0.14831874218208857 0.0009750720705443446 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1', 'ENST00000485226.1_1_1:26227942-26230296:-|nuORF'] 127052 17768 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 73.631 2 0.14831500524909258 0.0009750720705443446 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 94775 14595 RYLPTGSFPF True NCI_RA007_Epitope_Rep4 1183.6025943339098 1183.6014899358602 63.523 2 0.14830959340445216 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 61440 5183 LLEVQGSRPGK True NCI_RA007_Epitope_Rep2 1182.6720708760597 1182.67042490379 24.78 3 0.1483002919653033 0.0009750720705443446 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 131059 19437 VVLPLELKL True PC9_epitope_Rep6 1022.6739683690199 1022.6728699358599 87.425 2 0.14829485644567292 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 62286 19192 LLQNNLPAV True PC9_epitope_Rep1 980.5654805492 980.56438993586 78.617 2 0.14828811313539475 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 38569 20189 HHFLELVTL True PC9_epitope_Rep2 1107.60767971435 1107.60658993586 83.073 2 0.1482861347357147 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 70734 15266 M[Oxidation]EALPLLAA True H1975_Epitope_Rep2 943.5048548190299 943.50430496793 63.879 1 0.14827991183259087 0.0009750720705443446 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 21080 9378 ERDPATYNI True PC9_epitope_Rep2 1077.5090878718902 1077.50798993586 41.407 2 0.14827912700531196 0.0009750720705443446 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 72081 13955 M[Oxidation]RDPIRILV True PC9_epitope_Rep2 1127.64849936095 1127.64685490379 58.952 3 0.14827713103944126 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 98257 7288 SIFDGRVVAK True NCI_RA007_Epitope_Rep3 1090.61349337078 1090.6123899358602 35.778 2 0.14826743326348768 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 138977 9923 YSEVYPGQQY True H1975_Epitope_Rep1 1232.5349682665599 1232.53437496793 43.104 1 0.14826440571455787 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 102754 4843 SQEGRPVQV True PC9_epitope_Rep3 998.5145076054997 998.51340993586 23.724 2 0.14826396443786202 0.0009750720705443446 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 54275 11406 KYPNVFKKI True PC9_epitope_Rep1 1135.67536535135 1135.67371490379 48.752 3 0.14826207193820914 0.0009750720705443446 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 13905 13150 DRDPTAYAL True PC9_epitope_Rep5 1020.4876241513199 1020.48652993586 55.586 2 0.14824932450757955 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 34168 19629 GPFSQFIKA True PC9_epitope_Rep3 993.5283667644898 993.52726993586 80.74 2 0.14824715779715378 0.0009750720705443446 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 86585 11131 QRDETALQL True PC9_epitope_Rep2 1072.5512870370399 1072.55018993586 48.14 2 0.14824593593248245 0.0009750720705443446 0.9438714419765777 ['TRIP11|p.S1808Afs*25|2|0.16|ENSG00000100815|chr14:91975208-91975208|C/-|frameshift_variant', 'nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 2731 8698 AETSPAPIP True H1975_Epitope_Rep3 881.44944773745 881.4488949679301 38.456 1 0.14823686742287515 0.0009750720705443446 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 132764 16129 VYSPHVLNL True PC9_epitope_Rep4 1040.5654805492 1040.5643899358602 69.979 2 0.14823556444722397 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 28711 12584 FSVEGQLEFR True NCI_RA007_Epitope_Rep2 1210.5982372294598 1210.5971499358602 53.563 2 0.14823167535272883 0.0009750720705443446 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 28095 19674 FREDMPSIL True PC9_epitope_Rep5 1106.5430308524599 1106.54192993586 80.729 2 0.14823055419564835 0.0009750720705443446 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 86967 9058 QRVGQAVNL True PC9_epitope_Rep5 983.5512274673898 983.55012993586 39.786 2 0.1482209779422153 0.0009750720705443446 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 6588 18092 APWKPTWPA True PC9_epitope_Rep5 1052.5443511817998 1052.54324993586 74.603 2 0.14821866085783497 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000150687|O95084-2|PRSS23', 'ENSG00000150687|ENST00000280258|PRSS23'] 118828 11507 VEEGFSIQA True H1975_Epitope_Rep3 978.4658260775799 978.4652749679301 49.386 1 0.14821244336833042 0.0009750720705443446 0.9438714419765777 ['ENSG00000172409|ENST00000533682|CLP1'] 40016 18239 HQTIVVQLL True PC9_epitope_Rep4 1049.62332977849 1049.62222993586 78.225 2 0.1482068934464619 0.0009750720705443446 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 97871 17821 SHLDYDITL True PC9_epitope_Rep4 1075.5185899264302 1075.51748993586 76.58 2 0.14820574567399733 0.0009750720705443446 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 61393 13948 LLENDVSTLGY True H1975_Epitope_Rep3 1222.60813320682 1222.60702993586 58.967 2 0.1482030957914977 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 76243 12579 NSDELQELY True H1975_Epitope_Rep1 1109.48768372097 1109.4871749679298 53.432 1 0.14819750639130963 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000160209|O00764-2|PDXK', 'ENST00000398078.7_1_21:45161468-45175941:+|nuORF', 'ENSG00000160209|ENST00000291565|PDXK'] 136358 7268 YHDEADQSAL True PC9_epitope_Rep3 1147.47818166643 1147.47708993586 32.966 2 0.1481952997258739 0.0009750720705443446 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 73887 5344 NHHLQETSF True PC9_epitope_Rep2 1111.50467119779 1111.50356993586 25.943 2 0.14819278329464192 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 127961 9773 VRPPVQVY True PC9_epitope_Rep6 956.5443511817998 956.54324993586 48.034 2 0.14818997296077463 0.0009750720705443446 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 125720 9368 VNELTEFAK True NCI_RA007_Epitope_Rep1 1049.53932537101 1049.53822993586 40.431 2 0.148183310384522 0.0009750720705443446 0.9438714419765777 ['CON__P02769'] 87528 12874 QTHSVFVNV True PC9_epitope_Rep5 1029.5243440132099 1029.5232499358601 54.53 2 0.1481821307948369 0.0009750720705443446 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 21257 10979 ERIGETPEL True PC9_epitope_Rep4 1042.5294889632999 1042.52838993586 50.005 2 0.1481811287662069 0.0009750720705443446 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 86320 20876 QQHSILLLL True PC9_epitope_Rep2 1063.6389798426299 1063.6378899358601 85.742 2 0.1481757170215614 0.0009750720705443446 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 132761 16924 VYSPHVLNL True PC9_epitope_Rep2 1040.5654805492 1040.5643899358602 70.341 2 0.14817465708167318 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 82141 7490 PTDPKVVVY True H1975_Epitope_Rep1 1016.5542471591598 1016.55314993586 33.806 2 0.14815982761423063 0.0009750720705443446 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 7663 5032 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep1 990.4618036426001 990.46070993586 24.214 2 0.14815708584509032 0.0009750720705443446 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 110651 19289 TIVNELVRV True PC9_epitope_Rep3 1041.61824439805 1041.6171499358602 79.416 2 0.1481564332916783 0.0009750720705443446 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 17113 13854 EGSPIKVTL True PC9_epitope_Rep4 942.53859709502 942.53750993586 61.19 2 0.148148484103514 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF'] 96587 9182 SELSRTYLP True H1975_Epitope_Rep1 1064.55022440788 1064.54912993586 40.225 2 0.14814846233138076 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000135049|Q9UPW5-2|AGTPBP1', 'ENSG00000135049|ENST00000357081|AGTPBP1', 'nc|ENSG00000135049|Q9UPW5-3|AGTPBP1'] 32730 10729 GHVAPSVSL True PC9_epitope_Rep5 865.4657665079301 865.46466993586 46.261 2 0.14814668212794557 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 61998 6138 LLLQVQHASK True NCI_RA007_Epitope_Rep1 1135.67134260007 1135.66969490379 27.912 3 0.1481444035258451 0.0009750720705443446 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant', 'ENST00000450250.1_1_22:42397712-42397922:-|nuORF', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 34508 7062 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 34.43 2 0.14814075823162076 0.0009750720705443446 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 40242 15354 HRIFEPNCL True PC9_epitope_Rep5 1127.5545985956699 1127.5535099358601 64.068 2 0.14813983682200874 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF'] 36639 20470 GVLPNIQAV True PC9_epitope_Rep1 909.5283667644899 909.52726993586 83.551 2 0.14813967519672935 0.0009750720705443446 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 31884 5610 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 26.617 2 0.14813916596746457 0.0009750720705443446 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 130415 11282 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 50.289 2 0.148138754080588 0.0009750720705443446 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 47992 14060 KAIDIYEQV True PC9_epitope_Rep2 1077.57062549929 1077.5695299358601 59.36 2 0.14813792042917495 0.0009750720705443446 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA', 'ENST00000597778.5_1_19:47995938-47996286:-|nuORF'] 127069 15765 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 72.881 2 0.14813556772712508 0.0009750720705443446 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 84699 17829 QHFDTIYSI True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 73.876 2 0.14813199107450073 0.0009750720705443446 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 52137 21292 KLVEFDFLGA True PC9_epitope_Rep2 1137.60701100801 1137.6059099358602 87.363 2 0.14813139002446724 0.0009750720705443446 0.9438714419765777 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|9|fusion', 'ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 126366 10087 VPLAIVNKA True PC9_epitope_Rep6 923.58040233735 923.57930993586 49.402 2 0.14813009146902414 0.0009750720705443446 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 15101 5888 EADPGQYRC True PC9_epitope_Rep1 1037.42364399577 1037.4225499358602 27.465 2 0.14812324391936527 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 93461 5728 RSEKMTLSY True H1975_Epitope_Rep3 1113.54884450889 1113.54774993586 27.061 2 0.1481196269068448 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000101935|Q9Y4X0-4|AMMECR1', 'nc|ENSG00000101935|Q9Y4X0-3|AMMECR1', 'ENSG00000101935|ENST00000262844|AMMECR1'] 43295 7850 IHDSQAPSL True PC9_epitope_Rep3 966.47705946762 966.47596993586 35.182 2 0.14810257386685935 0.0009750720705443446 0.9438714419765777 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF'] 9709 9553 AYINRASLL True NCI_RA007_Epitope_Rep3 1019.57637958607 1019.57528993586 44.662 2 0.14809987744734393 0.0009750720705443446 0.9438714419765777 ['ENSG00000138663|ENST00000264389|COPS4', 'nc|ENSG00000138663|Q9BT78-2|COPS4'] 136351 6255 YHDDTENSL True PC9_epitope_Rep1 1092.43598250128 1092.4348899358602 28.873 2 0.14809779759935848 0.0009750720705443446 0.9438714419765777 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 46192 16746 ITDIQIPLDY True H1975_Epitope_Rep1 1189.6230549949698 1189.6219499358601 69.811 2 0.14809297552640444 0.0009750720705443446 0.9438714419765777 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF', 'ENST00000456578.6_1_1:40205841-40207105:+|nuORF', 'nc|ENSG00000084072|Q9UNP9-2|PPIE', 'ENSG00000084072|ENST00000324379|PPIE', 'nc|ENSG00000084072|Q9UNP9-3|PPIE'] 21366 19392 ERLSYTQLL True PC9_epitope_Rep1 1121.6080736371698 1121.6069699358602 79.403 2 0.14808475432539972 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 61583 19826 LLGPPPVGV True PC9_epitope_Rep5 847.51673945163 847.51564993586 81.307 2 0.14808240172338466 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 3228 5317 AGFAGDDAPR True NCI_RA007_Epitope_Rep1 975.4410083120698 975.43990993586 24.76 2 0.14808206758173878 0.0009750720705443446 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 125339 9434 VLSIGDGIAR True H1975_Epitope_Rep3 999.5712942056299 999.57018993586 41.289 2 0.14807881073979007 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF', 'ENST00000590448.5_1_18:43669752-43675082:-|nuORF'] 4416 12136 AIVDKVPSV True PC9_epitope_Rep4 926.54368247546 926.54258993586 54.496 2 0.1480757644401019 0.0009750720705443446 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 1178 6267 AEDAVEAIR True NCI_RA007_Epitope_Rep2 972.4876241513199 972.48652993586 28.983 2 0.14807541187972484 0.0009750720705443446 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000173933|Q9BWF3-3|RBM4', 'nc|ENSG00000173933|Q9BWF3-4|RBM4', 'nc|ENSG00000173933|Q9BWF3-2|RBM4', 'ENSG00000173914|ENST00000310046|RBM4B'] 33189 12413 GKVQIPIM[Oxidation]L True NCI_RA007_Epitope_Rep5 1013.5943385297699 1013.59324993586 54.403 2 0.14807479870955378 0.0009750720705443446 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 71138 19484 METVWTILP True H1975_Epitope_Rep3 1088.55761828744 1088.55652993586 81.661 2 0.1480553136016088 0.0009750720705443446 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 6903 8374 AQITGTEHL True PC9_epitope_Rep5 968.49270953176 968.49160993586 37.153 2 0.1480542409405863 0.0009750720705443446 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 16265 13455 EEIEGLISA True H1975_Epitope_Rep2 959.4811417885498 959.4805949679301 56.888 1 0.14805093991866286 0.0009750720705443446 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 113813 4535 TRDYSQPTAA True PC9_epitope_Rep5 1108.51490152832 1108.51380993586 22.511 2 0.14802749438425752 0.0009750720705443446 0.9438714419765777 ['ENSG00000078081|ENST00000265598|LAMP3'] 130727 18471 VVDPLNGWMY True H1975_Epitope_Rep1 1192.5586809166 1192.55758993586 77.0 2 0.14802606100583288 0.0009750720705443446 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant'] 7903 7162 ATATANQIILK True NCI_RA007_Epitope_Rep5 1142.66592286646 1142.66482993586 34.222 2 0.14802394710286554 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 136529 13280 YHQPAPIAQL True PC9_epitope_Rep2 1136.5978433066398 1136.59674993586 56.358 2 0.14802107203743076 0.0009750720705443446 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'nc|ENSG00000132680|Q7Z7F0-4|KHDC4', 'ENST00000466713.1_1_1:155896424-155904164:-|nuORF', 'KIAA0907-UBQLN4|1|fusion', 'nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 60363 21983 LIIDEIHLL True PC9_epitope_Rep1 1077.64339651673 1077.6422899358602 89.379 2 0.1480176901630557 0.0009750720705443446 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3'] 124175 18326 VLADALKSI True PC9_epitope_Rep3 928.5593325396001 928.55822993586 75.7 2 0.148016735442326 0.0009750720705443446 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 139928 19742 YVFPGVTRL True PC9_epitope_Rep5 1050.58621599378 1050.5851099358601 80.982 2 0.14801052040641202 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 28534 9471 FSHYMEENL True NCI_RA007_Epitope_Rep4 1168.4859098991599 1168.48480993586 43.287 2 0.14800862888733857 0.0009750720705443446 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 31276 10511 GDSVIVVLR True NCI_RA007_Epitope_Rep1 956.5654805492 956.56438993586 44.869 2 0.14800577073645735 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 128893 10388 VSTEVDARL True PC9_epitope_Rep1 988.5189242795998 988.51782993586 44.84 2 0.14800102520229724 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 75965 18137 NRGQFFTVY True PC9_epitope_Rep1 1130.55089311422 1130.5497899358602 74.556 2 0.14799841069651123 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000587673.5_1_19:1109158-1109530:-|nuORF'] 98538 13836 SILPAIFQK True NCI_RA007_Epitope_Rep5 1015.6066170851899 1015.60552993586 59.896 2 0.1479978644894636 0.0009750720705443446 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF', 'ENST00000533867.1_1_11:9304973-9309374:-|nuORF'] 12131 4578 DIIHDPGR True NCI_RA007_Epitope_Rep5 921.4668291370899 921.4657299358599 24.269 2 0.14799444153991503 0.0009750720705443446 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000528296.5_1_8:146015816-146017457:-|nuORF', 'ENST00000525232.5_1_8:146017155-146017514:-|nuORF', 'RPL8|p.G91Afs*58|1|0.17|ENSG00000161016|chr8:144791781-144791781|C/-|frameshift_variant'] 84022 5485 QENTQTPTV True H1975_Epitope_Rep3 1016.47745339044 1016.47687496793 26.151 1 0.14799297724631413 0.0009750720705443446 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 68700 13594 LVDDPLEY True H1975_Epitope_Rep1 962.4596780679799 962.45912496793 57.418 1 0.1479890804812669 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 83909 9652 QEISHLIEP True NCI_RA007_Epitope_Rep4 1064.55022440788 1064.54912993586 43.978 2 0.14798802596763036 0.0009750720705443446 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 42041 8027 IEEAMDGSETP True H1975_Epitope_Rep2 1177.48088408837 1177.47978993586 35.823 2 0.14798443181820073 0.0009750720705443446 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 105724 9206 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 45.55 2 0.14797612040184127 0.0009750720705443446 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 119252 9739 VELDNM[Oxidation]PLR True PC9_epitope_Rep2 1101.54884488933 1101.54774993586 42.802 2 0.14796002893929067 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 132828 16362 VYTHNLYYL True PC9_epitope_Rep4 1184.5866099165999 1184.58550993586 70.899 2 0.14795913891080048 0.0009750720705443446 0.9438714419765777 ['ENSG00000198954|ENST00000361983|KIFBP'] 74790 21036 NLNPEFISV True PC9_epitope_Rep1 1031.5287606873098 1031.52766993586 85.745 2 0.14795382878719038 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 8145 6669 ATFGTQVVEK True NCI_RA007_Epitope_Rep4 1078.56587447202 1078.56476993586 32.274 2 0.14794952497442163 0.0009750720705443446 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'C3|p.K263Rfs*40|2|0.22|ENSG00000125730|chr19:6713497-6713497|C/-|frameshift_variant'] 113759 6231 TRDPQFQKL True PC9_epitope_Rep2 1131.6036569630699 1131.6020249037902 29.365 3 0.1479454234790602 0.0009750720705443446 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 8934 8812 AVGLVLPAK True NCI_RA007_Epitope_Rep5 866.5589386167799 866.55784993586 40.561 2 0.14793153404055615 0.0009750720705443446 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 125002 6927 VLNTNIDGR True PC9_epitope_Rep2 1000.53015766964 1000.52906993586 32.045 2 0.14792524706137913 0.0009750720705443446 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 44324 16135 IMDSGELDFY True H1975_Epitope_Rep2 1188.50089125696 1188.49978993586 67.274 2 0.14792418950991895 0.0009750720705443446 0.9438714419765777 ['ENSG00000101216|ENST00000370077|GMEB2'] 97624 19139 SHALVTLTL True PC9_epitope_Rep5 953.5545815123301 953.55348993586 78.653 2 0.1479222299730776 0.0009750720705443446 0.9438714419765777 ['ENST00000531423.1_1_8:145696018-145698106:+|nuORF', 'ENSG00000167702|ENST00000645548|KIFC2', 'nc|ENSG00000167702|Q96AC6|KIFC2'] 74003 7341 NHQKDIQVL True PC9_epitope_Rep1 1093.58800689893 1093.5869099358601 33.049 2 0.14792086468289534 0.0009750720705443446 0.9438714419765777 ['ENSG00000153561|ENST00000283632|RMND5A'] 104774 7140 STDPEALHY True H1975_Epitope_Rep3 1031.45598966987 1031.4548899358601 32.436 2 0.14791688156314092 0.0009750720705443446 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 106164 8936 SVPEEFHTT True PC9_epitope_Rep5 1045.47163973401 1045.4705499358602 39.317 2 0.14791546695482735 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 47961 7081 KADPSHFEL True NCI_RA007_Epitope_Rep3 1042.5083595959 1042.5072699358602 34.97 2 0.14791466257108035 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENST00000524436.5_1_1:26856411-26877988:+|nuORF', 'ENST00000530607.1_1_1:26872355-26877988:+|nuORF'] 74113 11956 NHVTPPNVSL True PC9_epitope_Rep2 1076.56145779792 1076.56036993586 51.31 2 0.14791117252535982 0.0009750720705443446 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 1393 8415 AEEFKVPAA True H1975_Epitope_Rep3 960.4916469025998 960.49109496793 37.352 1 0.14790558157713654 0.0009750720705443446 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 30138 17186 FYQPKIQQF True PC9_epitope_Rep5 1197.61824439805 1197.6171499358602 71.127 2 0.14790154920494672 0.0009750720705443446 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 13119 12514 DLSLDDFK True H1975_Epitope_Rep1 951.45492704071 951.45382993586 53.176 2 0.14790119424723538 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 85024 7038 QIGPAPPLK True NCI_RA007_Epitope_Rep4 919.5491022090699 919.54800993586 33.699 2 0.14790058641789483 0.0009750720705443446 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 6389 20764 APRTVLLLLSA True PC9_epitope_Rep2 1152.7230438197598 1152.72194993586 85.311 2 0.1478916009121614 0.0009750720705443446 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 99688 9746 SLGEISALTSK True H1975_Epitope_Rep1 1104.60265390356 1104.60154993586 42.417 2 0.1478876374651287 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 52461 11654 KPIEELQNV True PC9_epitope_Rep5 1068.58152453616 1068.5804299358601 49.822 2 0.14788204513364317 0.0009750720705443446 0.9438714419765777 ['ENSG00000166920|ENST00000396650|C15orf48'] 16471 12204 EELSNVLAA True H1975_Epitope_Rep3 944.4814761417199 944.48092496793 52.115 1 0.147881376013368 0.0009750720705443446 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 86232 15690 QPYMPTVSA True PC9_epitope_Rep2 992.4637179025999 992.4631649679301 65.627 1 0.14788014515622985 0.0009750720705443446 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 95997 11502 SEAFSINFR True H1975_Epitope_Rep3 1069.51925863277 1069.5181699358602 49.367 2 0.14787699051412098 0.0009750720705443446 0.9438714419765777 ['CON__P34955'] 27926 19511 FQNPFRSEL True PC9_epitope_Rep3 1136.56145779792 1136.56036993586 80.28 2 0.14787570518800033 0.0009750720705443446 0.9438714419765777 ['ENSG00000073050|ENST00000262887|XRCC1', 'XRCC1|p.D487Tfs*6|2|0.14|ENSG00000073050|chr19:43546074-43546074|C/-|frameshift_variant'] 22977 17120 EVIKELAQI True PC9_epitope_Rep2 1041.6070110080097 1041.60647496793 71.1 1 0.1478588786096385 0.0009750720705443446 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 38137 7098 HEQLRAVIV True H1975_Epitope_Rep2 1063.61382772395 1063.6127299358602 32.232 2 0.14785545490875882 0.0009750720705443446 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 106803 19737 SYGKINILL True PC9_epitope_Rep5 1019.60153170475 1019.60042993586 80.966 2 0.14785493977268913 0.0009750720705443446 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant'] 133537 20251 WHIDTILHV True PC9_epitope_Rep5 1132.60292868708 1132.60182993586 82.945 2 0.14785305343840202 0.0009750720705443446 0.9438714419765777 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000556741.5_1_14:24032738-24033292:-|nuORF'] 135174 7979 YASSANLHLPK True PC9_epitope_Rep4 1199.62987171091 1199.62822490379 38.136 3 0.14785052098826829 0.0009750720705443446 0.9438714419765777 ['CON__P34955'] 45388 8514 ISDPGVQGY True H1975_Epitope_Rep3 934.43961132974 934.4390649679301 37.735 1 0.14784565408812125 0.0009750720705443446 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 11657 15058 DHDGNIVEL True PC9_epitope_Rep5 1010.46688870674 1010.46578993586 62.927 2 0.14784524421630074 0.0009750720705443446 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 138481 11826 YRGNVGVVL True PC9_epitope_Rep4 975.5501648382299 975.54906993586 53.256 2 0.14783577397946235 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT', 'ENSG00000128951|ENST00000331200|DUT'] 114439 7925 TSDYVSQSY True H1975_Epitope_Rep3 1048.43491987212 1048.43437496793 35.453 1 0.147833857160532 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 136910 13998 YKDGTELEL True PC9_epitope_Rep3 1066.51825557326 1066.51714993586 58.915 2 0.14783119050526805 0.0009750720705443446 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 28483 11477 FSEVNMQEY True H1975_Epitope_Rep3 1145.46992548185 1145.4688299358602 49.269 2 0.1478299774844817 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 23907 18658 EYMLQNHVF True PC9_epitope_Rep1 1179.5382798251899 1179.5371899358602 76.556 2 0.1478284960939664 0.0009750720705443446 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 130687 14434 VVDEIFNEY True H1975_Epitope_Rep3 1126.51825557326 1126.51714993586 60.875 2 0.1478198891315055 0.0009750720705443446 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 129302 10867 VTDSGPTFNY True H1975_Epitope_Rep2 1099.4822044177101 1099.48110993586 46.829 2 0.1478166467536678 0.0009750720705443446 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 84656 6260 QHEGGVQEL True PC9_epitope_Rep1 995.46722305991 995.46612993586 28.893 2 0.1478120662617326 0.0009750720705443446 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 33538 17655 GLIEILKKV True PC9_epitope_Rep6 1011.6692173417499 1011.66812993586 80.549 2 0.14780531207081352 0.0009750720705443446 0.9438714419765777 ['ENSG00000105185|ENST00000590247|PDCD5'] 29892 18675 FVYPLDFART True PC9_epitope_Rep6 1227.6288090817498 1227.6277099358601 84.478 2 0.14779993550613588 0.0009750720705443446 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant', 'SLC25A5|p.R140H|1|0.11|ENSG00000005022|chrX:119469968-119469968|G/A|missense_variant', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 86604 16371 QRDIQTLIL True PC9_epitope_Rep6 1098.63970811862 1098.6386099358601 75.357 2 0.1477979755218133 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF'] 104463 10659 SSLPTQLFK True NCI_RA007_Epitope_Rep3 1019.5651461960299 1019.56404993586 48.974 2 0.1477900319201791 0.0009750720705443446 0.9438714419765777 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 113168 16857 TQDGNIYQL True PC9_epitope_Rep2 1050.4981888350198 1050.49708993586 70.088 2 0.14778681465476226 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 62290 19082 LLQNNLPAV True PC9_epitope_Rep5 980.5654805492 980.56438993586 78.428 2 0.14778666152555428 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 8007 5990 ATDPTIHTV True PC9_epitope_Rep6 953.4818104948899 953.48070993586 31.36 2 0.14778231534504555 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 33101 10420 GKKIYEFTL True NCI_RA007_Epitope_Rep4 1097.61209638845 1097.61098993586 46.934 2 0.14776676666179078 0.0009750720705443446 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 73761 14459 NHASLISAL True PC9_epitope_Rep2 924.50288029264 924.50178993586 60.886 2 0.14775383683728124 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 109570 17943 THATQLLVL True PC9_epitope_Rep5 994.58113061334 994.58002993586 74.035 2 0.14775178501256697 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000476102.1_1_1:159900586-159913268:-|nuORF'] 48628 4884 KEIQDSQVP True H1975_Epitope_Rep2 1042.5294889633 1042.52838993586 23.871 2 0.147750797065951 0.0009750720705443446 0.9438714419765777 ['ENSG00000132688|ENST00000368223|NES'] 4676 14912 ALDENGNLWY True H1975_Epitope_Rep3 1193.53530261973 1193.5342099358602 62.746 2 0.14774742071214272 0.0009750720705443446 0.9438714419765777 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1'] 85996 21992 QPILLELEA True PC9_epitope_Rep1 1024.580461907 1024.57987496793 89.413 1 0.1477377931789588 0.0009750720705443446 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 94685 10714 RYLEKPMEI True PC9_epitope_Rep4 1177.6165301458898 1177.61488490379 48.965 3 0.14773560661294946 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 99964 22845 SLINVGLISV True PC9_epitope_Rep3 1013.6120963884499 1013.61098993586 93.144 2 0.1477351022343349 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 24334 9232 FADLSEAANR True PC9_epitope_Rep4 1092.5199869087598 1092.5188899358602 43.109 2 0.14773063354497348 0.0009750720705443446 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 117451 11914 VADTVARVL True PC9_epitope_Rep2 942.5498304850598 942.54872993586 51.152 2 0.14772963322207439 0.0009750720705443446 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 100492 11016 SLPKGVVEV True PC9_epitope_Rep6 926.54368247546 926.54258993586 53.27 2 0.1477290491885385 0.0009750720705443446 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 2810 5548 AEVETRIEA True H1975_Epitope_Rep1 1016.5138388991599 1016.51274993586 26.406 2 0.14772728621730838 0.0009750720705443446 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 40049 8757 HQVTLEESL True NCI_RA007_Epitope_Rep4 1054.5294889633 1054.52838993586 40.482 2 0.14772720333279002 0.0009750720705443446 0.9438714419765777 ['BMP2K-CDS1|1|fusion', 'ENSG00000138756|ENST00000502613|BMP2K', 'nc|ENSG00000138756|Q9NSY1-2|BMP2K', 'nc|ENSG00000138756|Q9NSY1-3|BMP2K'] 138237 8230 YQTEKGITV True PC9_epitope_Rep2 1037.5393253710097 1037.53822993586 37.014 2 0.14772362475371292 0.0009750720705443446 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 73545 22121 NFLPPIIARF True PC9_epitope_Rep5 1186.6862643882198 1186.6851699358601 90.124 2 0.147722216691288 0.0009750720705443446 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 21133 20888 ERDRLILFL True PC9_epitope_Rep3 1173.6869926642098 1173.6853349037901 85.62 3 0.1477199242625511 0.0009750720705443446 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 74120 11352 NHVTPPNVSL True PC9_epitope_Rep4 1076.56145779792 1076.56036993586 51.443 2 0.14771375887834723 0.0009750720705443446 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 21110 14580 ERDPSPWAV True PC9_epitope_Rep1 1055.50360856863 1055.5025099358602 60.905 2 0.14771242954027963 0.0009750720705443446 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 37581 18600 GYSEHFVEF True PC9_epitope_Rep5 1113.47672511445 1113.47562993586 76.569 2 0.14770882883236672 0.0009750720705443446 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 43901 14681 ILDPHVVLL True H1975_Epitope_Rep2 1017.6222671493299 1017.6211699358599 61.632 2 0.14770735533501536 0.0009750720705443446 0.9438714419765777 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 2140 11488 AELWGEQAEA True H1975_Epitope_Rep2 1102.49310345458 1102.4925749679298 49.244 1 0.1477043381543379 0.0009750720705443446 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 140866 18160 YYTPITPHL True PC9_epitope_Rep1 1103.56514619603 1103.56404993586 74.643 2 0.14769285379223152 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 43899 9054 ILDNSPGAY True H1975_Epitope_Rep2 948.4552613938799 948.45471496793 39.78 1 0.14769272471588404 0.0009750720705443446 0.9438714419765777 ['ENSG00000175826|ENST00000574322|CTDNEP1'] 52660 7049 KQFEKQVEL True PC9_epitope_Rep2 1147.6237237013097 1147.62208490379 32.512 3 0.1476918966505848 0.0009750720705443446 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 61347 4531 LLEGEESR True NCI_RA007_Epitope_Rep2 931.4610750503099 931.45996993586 22.252 2 0.1476887561925734 0.0009750720705443446 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 44347 18110 IM[Oxidation]LEALERV True PC9_epitope_Rep2 1088.58998142532 1088.5888899358602 74.963 2 0.14768559885112495 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000224543|A8MWD9|SNRPGP15', 'ENSG00000143977|ENST00000272348|SNRPG'] 73937 20222 NHIQDLISL True PC9_epitope_Rep1 1051.56620882519 1051.5651099358602 82.613 2 0.14768256114037603 0.0009750720705443446 0.9438714419765777 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3190651-3210559:+|nuORF'] 105753 17407 SVIDHIHLI True PC9_epitope_Rep4 1045.59202965021 1045.59092993586 74.949 2 0.14768091806707334 0.0009750720705443446 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 24226 18201 EYVSQHLVF True PC9_epitope_Rep1 1120.5553097883198 1120.5542099358602 74.8 2 0.1476635551414545 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 72901 19821 NAVVELVTV True PC9_epitope_Rep4 942.5385970950199 942.53750993586 84.37 2 0.14765602780181283 0.0009750720705443446 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 40137 10649 HRDSGILGL True PC9_epitope_Rep6 966.5246783663799 966.52358993586 51.778 2 0.1476543135209735 0.0009750720705443446 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 108726 9297 TEMPGTLQA True H1975_Epitope_Rep3 946.4429824580199 946.44188993586 40.755 2 0.1476419683096581 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 44618 10820 IPHSLPGAVAA True PC9_epitope_Rep6 1031.5763795860698 1031.5752899358602 52.467 2 0.14763090343669646 0.0009750720705443446 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 62778 15963 LMDHTIPEV True PC9_epitope_Rep3 1053.51648175145 1053.5153899358602 66.548 2 0.14762615268661133 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 42115 12414 IEENSNVILP True H1975_Epitope_Rep2 1126.58700383942 1126.5859099358602 52.836 2 0.1476139947679984 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000417282.1_1_7:56372411-56373020:-|nuORF'] 53089 7880 KSDTQNLLY True H1975_Epitope_Rep2 1080.54513902744 1080.5440499358601 35.256 2 0.1476105520848085 0.0009750720705443446 0.9438714419765777 ['ENSG00000012232|ENST00000220562|EXTL3'] 106129 6134 SVNSTVLVK True NCI_RA007_Epitope_Rep2 945.5494961318899 945.54838993586 28.467 2 0.14761008253539465 0.0009750720705443446 0.9438714419765777 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML'] 9685 12822 AYHELAQVY True PC9_epitope_Rep5 1092.5240096600398 1092.52290993586 54.329 2 0.14760832231709203 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENSG00000141030|ENST00000268717|COPS3'] 137112 15187 YLDDPTNSWY True H1975_Epitope_Rep2 1272.52988288612 1272.52937496793 63.574 1 0.14760452737102805 0.0009750720705443446 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 43663 20248 IIMEEVVKL True PC9_epitope_Rep1 1072.620218544 1072.6191299358602 82.712 2 0.14760383550145292 0.0009750720705443446 0.9438714419765777 ['ENSG00000167880|ENST00000301607|EVPL'] 86401 6000 QQMGQKVQL True NCI_RA007_Epitope_Rep3 1058.5542642424998 1058.55316993586 30.578 2 0.14759856676232552 0.0009750720705443446 0.9438714419765777 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000481145.1_1_1:89729385-89732242:-|nuORF', 'ENSG00000162645|ENST00000370466|GBP2', 'ENSG00000154451|ENST00000370459|GBP5', 'nc|ENSG00000154451|Q96PP8-2|GBP5'] 70212 23614 LYLPSFFTY True PC9_epitope_Rep2 1149.57464825057 1149.57354993586 96.3 2 0.14759167451510175 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 44540 13385 IPAPPLSKV True PC9_epitope_Rep5 920.56950330048 920.56840993586 56.502 2 0.14758837719113932 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF'] 76567 6514 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 29.97 2 0.1475869892201261 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 21137 20832 ERDRLILFL True PC9_epitope_Rep5 1173.6869926642098 1173.6858899358601 85.179 2 0.14758007149100477 0.0009750720705443446 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 107202 22934 SYPDLLPTF True PC9_epitope_Rep1 1051.52261267771 1051.5215099358602 93.016 2 0.1475790529514603 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 97807 13500 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 57.216 2 0.14757745542733725 0.0009750720705443446 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 120260 17146 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 70.774 2 0.1475751808661019 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 73546 20032 NFLPPIIARF True PC9_epitope_Rep6 1186.6862643882198 1186.6851699358601 89.721 2 0.14756820380818061 0.0009750720705443446 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 103156 20670 SQNDGFFAV True PC9_epitope_Rep5 983.4348603024699 983.43431496793 84.562 1 0.14756530813464933 0.0009750720705443446 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 87782 2686 QVHPDTGISSK True PC9_epitope_Rep3 1167.5884008217502 1167.58675490379 14.799 3 0.14756388660031733 0.0009750720705443446 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26', 'ENSG00000146047|ENST00000274764|H2BC1'] 6356 5251 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 27.982 2 0.1475613630243123 0.0009750720705443446 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 88244 17119 QYEIWRELF True NCI_RA007_Epitope_Rep3 1282.6346227381798 1282.63352993586 75.21 2 0.1475583263937642 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000168092|P68402-3|PAFAH1B2', 'nc|ENSG00000168092|P68402-2|PAFAH1B2', 'ENST00000533206.1_1_11:117023163-117034692:+|nuORF', 'nc|ENSG00000168092|P68402-4|PAFAH1B2', 'ENSG00000168092|ENST00000527958|PAFAH1B2'] 6128 9447 APNLQNQQV True PC9_epitope_Rep5 1010.5145076055 1010.51340993586 41.293 2 0.14753916765156558 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 31876 5765 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 27.169 2 0.14753827197389247 0.0009750720705443446 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 125671 15291 VMSATFAKF True PC9_epitope_Rep4 1000.5051887917599 1000.50408993586 66.746 2 0.14753689613454116 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 87341 8764 QTATTTMVY True H1975_Epitope_Rep3 1014.4691972058599 1014.46808993586 38.717 2 0.14753448186751522 0.0009750720705443446 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 137760 6192 YNNVSNFGR True NCI_RA007_Epitope_Rep2 1069.49410651409 1069.49300993586 28.693 2 0.14752985919570413 0.0009750720705443446 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 10890 9735 DAQSAPLRV True PC9_epitope_Rep5 955.50869394907 955.50758993586 42.416 2 0.14752870789021527 0.0009750720705443446 0.9438714419765777 ['CON__P02754'] 61848 21575 LLLDVPTAAV True PC9_epitope_Rep2 1010.6011973515799 1010.6006749679301 88.46 1 0.14752796404180438 0.0009750720705443446 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 123642 19620 VILPKFTAV True PC9_epitope_Rep5 986.6164534929 986.61534993586 80.521 2 0.14752683168057037 0.0009750720705443446 0.9438714419765777 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 37946 11044 HEENPAWLP True H1975_Epitope_Rep2 1091.50360856863 1091.5025099358602 47.51 2 0.14752128751368596 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000114993|Q9BST9-3|RTKN', 'nc|ENSG00000114993|Q9BST9-2|RTKN', 'ENSG00000114993|ENST00000272430|RTKN'] 113182 13109 TQDGTPITV True PC9_epitope_Rep3 930.4658260775799 930.46472993586 55.446 2 0.14752064709022764 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 106359 5201 SVSLPSVKK True NCI_RA007_Epitope_Rep4 943.57023157647 943.56912993586 26.538 2 0.14751943700691938 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A', 'nc|ENSG00000034677|Q9NV58-2|RNF19A'] 87881 20305 QVLPHLLEV True PC9_epitope_Rep1 1046.6124307416198 1046.61132993586 82.932 2 0.1475068328140887 0.0009750720705443446 0.9438714419765777 ['ENSG00000188811|ENST00000379600|NHLRC3', 'nc|ENSG00000188811|Q5JS37-2|NHLRC3'] 30109 20377 FYPPKVELF True PC9_epitope_Rep2 1138.60628273202 1138.6051899358602 83.803 2 0.1475057790156316 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 84688 17874 QHFDSVMQL True PC9_epitope_Rep1 1103.5069796969099 1103.50588993586 73.546 2 0.1475054849559623 0.0009750720705443446 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 44790 18955 IPTPIVGV True PC9_epitope_Rep4 794.49019035062 794.48908993586 80.998 2 0.14749184045512168 0.0009750720705443446 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA'] 115280 13258 TVDNARIVL True PC9_epitope_Rep5 999.5712942056299 999.57018993586 56.007 2 0.14749065974808212 0.0009750720705443446 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 137131 15951 YLDIGQVYY True H1975_Epitope_Rep3 1132.54407639828 1132.54357496793 66.81 1 0.14749046821712278 0.0009750720705443446 0.9438714419765777 ['ENSG00000006555|ENST00000371276|TTC22'] 37698 19769 HAMTEFLEV True PC9_epitope_Rep3 1075.50083168731 1075.4997299358602 81.27 2 0.1474879754310966 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 27289 24396 FLYPFPLAL True PC9_epitope_Rep5 1079.60555445603 1079.60497496793 98.874 1 0.14748215828175676 0.0009750720705443446 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 54357 15643 KYQEVTNNLEF True PC9_epitope_Rep2 1383.6670450652698 1383.66594993586 65.446 2 0.14747515197982006 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 76338 12239 NSELSCQLY True H1975_Epitope_Rep1 1055.4593607981499 1055.45877496793 52.099 1 0.1474739915649621 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 8595 6430 AVAEPLPSPR True NCI_RA007_Epitope_Rep5 1035.5712942056298 1035.57018993586 31.401 2 0.14747345842425363 0.0009750720705443446 0.9438714419765777 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 21546 15469 ERSDIVVQI True PC9_epitope_Rep3 1057.5767735088898 1057.57566993586 64.654 2 0.14747102851091384 0.0009750720705443446 0.9438714419765777 ['ENSG00000041802|ENST00000265245|LSG1'] 11755 18030 DHIEELVSL True PC9_epitope_Rep6 1053.53423999057 1053.5331499358601 81.981 2 0.1474633075500041 0.0009750720705443446 0.9438714419765777 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 95393 8702 SAINEVVTR True PC9_epitope_Rep3 987.53490869691 987.53380993586 38.42 2 0.14746286578837406 0.0009750720705443446 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 38784 9202 HHYSGNNIEL True PC9_epitope_Rep1 1182.5417849825 1182.54013490379 40.245 3 0.1474563372384034 0.0009750720705443446 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 127040 20868 VPYLVGQVV True PC9_epitope_Rep5 972.5644179200399 972.56386496793 85.321 1 0.14745558115745808 0.0009750720705443446 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 96546 11704 SELPGAFEA True NCI_RA007_Epitope_Rep3 919.4287122928699 919.42816496793 53.151 1 0.14745299404166537 0.0009750720705443446 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 117728 19949 VALDKVIEI True PC9_epitope_Rep1 998.6011973515799 998.60010993586 81.556 2 0.14744411837040572 0.0009750720705443446 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 38801 9226 HHYSGNNIEL True PC9_epitope_Rep5 1182.5417849825 1182.5406899358602 40.434 2 0.14744047291410994 0.0009750720705443446 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 132289 12974 VYLEDSGHTL True PC9_epitope_Rep5 1132.5400536470001 1132.53894993586 54.914 2 0.14744023593351333 0.0009750720705443446 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4'] 1048 7964 AEAIKAWTA True H1975_Epitope_Rep3 959.5076313199099 959.50652993586 35.605 2 0.1474337428992104 0.0009750720705443446 0.9438714419765777 ['ENST00000565493.1_1_20:34638316-34638640:-|nuORF'] 132881 18773 VYTSKSDVWSF True PC9_epitope_Rep2 1317.62411762413 1317.6230299358601 77.58 2 0.1474195164722636 0.0009750720705443446 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 7181 17385 ARDETEFYL True PC9_epitope_Rep1 1142.5244035828598 1142.5233099358602 71.675 2 0.14741008849036627 0.0009750720705443446 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 88216 18144 QYASAFHFL True PC9_epitope_Rep6 1082.51853035678 1082.51742993586 82.427 2 0.14740638015122867 0.0009750720705443446 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 131756 19525 VYADKLLNI True PC9_epitope_Rep1 1047.59644632431 1047.5953499358602 79.923 2 0.1474030412746105 0.0009750720705443446 0.9438714419765777 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2', 'ENST00000560620.1_1_15:44806831-44810879:+|nuORF'] 51997 11932 KLEATINELV True H1975_Epitope_Rep3 1128.63903941228 1128.6379499358602 51.051 2 0.14739689694159763 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 17342 10505 EHDPVGQMV True PC9_epitope_Rep1 1010.44913046762 1010.44802993586 45.297 2 0.14739168476246126 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 94693 6245 RYLENGKETL True PC9_epitope_Rep2 1221.6353510141698 1221.6337049037902 29.419 3 0.14738231826144418 0.0009750720705443446 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 17742 20030 EHTEVLQLL True PC9_epitope_Rep3 1080.5815245361598 1080.5804299358601 82.295 2 0.14738101704517845 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 25366 7487 FEHITAETP True H1975_Epitope_Rep3 1043.49237517859 1043.4912699358601 33.78 2 0.14736082948353046 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000128487|Q5M775-5|SPECC1', 'nc|ENSG00000128487|Q5M775-3|SPECC1', 'nc|ENSG00000128487|Q5M775-2|SPECC1', 'nc|ENSG00000128487|Q5M775-4|SPECC1', 'ENSG00000128487|ENST00000395527|SPECC1'] 77299 15223 NYKDLNGNVF True PC9_epitope_Rep3 1182.5669371011797 1182.5658499358601 63.701 2 0.14736057921464893 0.0009750720705443446 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 7432 9150 ASDDFDQASY True H1975_Epitope_Rep2 1117.4199980839699 1117.41947496793 40.148 1 0.1473593336536701 0.0009750720705443446 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 21853 10378 ESEDPDYYQY True H1975_Epitope_Rep3 1307.48299226335 1307.4824749679299 44.975 1 0.14735752863498547 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 88522 12308 RADGNFLLY True H1975_Epitope_Rep3 1067.53999407735 1067.5388899358602 52.523 2 0.1473509669842284 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 646 10085 AATKILTEL True H1975_Epitope_Rep1 958.5698972233 958.56880993586 43.728 2 0.1473295180586894 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'ENSG00000129680|ENST00000316077|MAP7D3'] 23826 19342 EYLLKVNEI True PC9_epitope_Rep1 1119.61757569171 1119.61646993586 79.204 2 0.1473238058502422 0.0009750720705443446 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 28366 14030 FSDLYNEVY True H1975_Epitope_Rep1 1148.50260550912 1148.50207496793 59.13 1 0.1473203995920154 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 26634 21445 FLADPSAFVAA True PC9_epitope_Rep2 1107.5600608155898 1107.5589699358602 87.961 2 0.147320113772739 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 17284 11618 EHDGSLFQA True PC9_epitope_Rep5 1002.4406739589 1002.43956993586 49.684 2 0.1473186278368837 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 114210 13235 TRVGMSVNAL True PC9_epitope_Rep5 1046.5542642425 1046.55316993586 55.916 2 0.14731711003135067 0.0009750720705443446 0.9438714419765777 ['ENSG00000171703|ENST00000343484|TCEA2', 'nc|ENSG00000171703|Q15560-2|TCEA2'] 4076 10593 AHSESINVI True PC9_epitope_Rep5 968.4927095317599 968.49160993586 45.734 2 0.14730784608859804 0.0009750720705443446 0.9438714419765777 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'nc|ENSG00000100592|Q9Y4D1-3|DAAM1'] 102865 15198 SQHGVIIQL True PC9_epitope_Rep2 993.5607295219299 993.55962993586 63.72 2 0.147307698240784 0.0009750720705443446 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 124646 23038 VLIETLVTL True PC9_epitope_Rep5 999.6215984429899 999.62050993586 93.607 2 0.1473004780665705 0.0009750720705443446 0.9438714419765777 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY', 'ENST00000606061.1_1_20:32881868-32891076:-|nuORF'] 89840 21240 RFLDDLGLKF True PC9_epitope_Rep3 1222.6710082468996 1222.66936490379 86.992 3 0.14729836793708062 0.0009750720705443446 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 41241 7206 IAEKETLEY True H1975_Epitope_Rep2 1094.54955570154 1094.5484499358602 32.652 2 0.14729834675867962 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14', 'nc|ENSG00000185842|Q0VDD8-2|DNAH14', 'ENST00000498360.5_1_1:225142255-225148920:+|nuORF', 'nc|ENSG00000185842|Q0VDD8-3|DNAH14'] 72091 16555 MRDPIRILV True PC9_epitope_Rep2 1111.65358436095 1111.65248993586 68.917 2 0.14729447138207458 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 151 10874 AADPSVVNL True H1975_Epitope_Rep1 884.46034677432 884.4597949679301 46.786 1 0.1472757532005941 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 48464 5316 KEELRLEEA True H1975_Epitope_Rep2 1115.58225281215 1115.5811499358601 25.499 2 0.1472750329379833 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 139857 15639 YVDPQFLTY True H1975_Epitope_Rep2 1144.54407639828 1144.54357496793 65.311 1 0.14727120647722666 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 84661 4989 QHEGGVQEL True PC9_epitope_Rep4 995.46722305991 995.46612993586 25.803 2 0.1472700847836771 0.0009750720705443446 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 20998 5900 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 28.09 2 0.1472698100779269 0.0009750720705443446 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 71314 10381 MHFESGSTL True PC9_epitope_Rep4 1007.43823143075 1007.43712993586 47.63 2 0.14726973849484945 0.0009750720705443446 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 47498 22116 IYLDLPQNF True PC9_epitope_Rep2 1121.57571087973 1121.57460993586 90.546 2 0.14726623053783394 0.0009750720705443446 0.9438714419765777 ['ENSG00000013561|ENST00000394520|RNF14', 'ENST00000502341.5_1_5:141348723-141357950:+|nuORF'] 40842 12408 HVLEEVQQV True PC9_epitope_Rep3 1079.56112344475 1079.56002993586 52.757 2 0.14726453408375542 0.0009750720705443446 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 114403 8534 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41782993586 37.781 2 0.14725809909339044 0.0009750720705443446 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 27933 10179 FQPEANPSHL True PC9_epitope_Rep2 1138.54072235334 1138.5396299358601 44.493 2 0.14724289342332433 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'ENST00000261509.10_1_4:169846154-169847533:+|nuORF'] 107276 19952 SYQKVIELF True PC9_epitope_Rep2 1125.6070110080097 1125.60647496793 82.145 1 0.1472428270213641 0.0009750720705443446 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 127574 20487 VQWENSFVSV True PC9_epitope_Rep4 1193.57168812845 1193.5705899358602 86.952 2 0.14723658606617754 0.0009750720705443446 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 132364 21009 VYMDWYEKF True PC9_epitope_Rep5 1279.5583465634297 1279.5577749679298 85.868 1 0.1472324214269584 0.0009750720705443446 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 35824 14873 GTYTGFIKV True PC9_epitope_Rep6 984.5280324113198 984.52692993586 69.187 2 0.14723077170353224 0.0009750720705443446 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 17593 15807 EHLQVITTL True PC9_epitope_Rep4 1052.5866099166 1052.58550993586 68.725 2 0.14723031287464336 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 23402 18081 EVVERLLSV True PC9_epitope_Rep4 1042.60225998074 1042.60116993586 77.611 2 0.14722666924327496 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 49019 11346 KFIDTTSKF True PC9_epitope_Rep1 1085.57571087973 1085.57460993586 48.521 2 0.14722307278659516 0.0009750720705443446 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 41028 9138 HYGQSGISM True PC9_epitope_Rep5 978.4229157197799 978.42180993586 40.095 2 0.1472046736241238 0.0009750720705443446 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 90954 7619 RLFVGSIPK True NCI_RA007_Epitope_Rep5 1015.6178504752298 1015.61674993586 36.005 2 0.1472014395550977 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 37937 5928 HEEIAM[Oxidation]ATVTA True H1975_Epitope_Rep1 1187.54923881215 1187.54814993586 27.874 2 0.14719755911731078 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 110585 7787 TISNDGATILK True NCI_RA007_Epitope_Rep1 1131.6135529404298 1131.61244993586 34.28 2 0.14718873130541185 0.0009750720705443446 0.9438714419765777 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7'] 129259 10336 VTDPSTLEQY True H1975_Epitope_Rep2 1151.53463391339 1151.53352993586 44.766 2 0.1471742742602284 0.0009750720705443446 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 2526 6257 AEQTMSHLP True H1975_Epitope_Rep2 1012.46478053176 1012.46368993586 29.022 2 0.14717247414797444 0.0009750720705443446 0.9438714419765777 ['ENSG00000173914|ENST00000310046|RBM4B'] 84970 10045 QIDPSIQRV True PC9_epitope_Rep2 1054.57710786206 1054.5760099358602 43.962 2 0.14717085102004174 0.0009750720705443446 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant'] 105922 10191 SVLDSTAKV True PC9_epitope_Rep1 918.5022115863 918.50110993586 44.078 2 0.14716987525615544 0.0009750720705443446 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 138770 14024 YSDDIPHAL True PC9_epitope_Rep2 1029.47672511445 1029.47562993586 59.221 2 0.14716515104928451 0.0009750720705443446 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 8927 9353 AVGLVLPAK True NCI_RA007_Epitope_Rep1 866.5589386167799 866.55784993586 40.374 2 0.14716193637789626 0.0009750720705443446 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 115699 22327 TVLEQVLPI True PC9_epitope_Rep1 1010.6011973515798 1010.60010993586 90.695 2 0.14714939728735615 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 67817 22904 LTIEDGIFEV True PC9_epitope_Rep1 1134.58085582982 1134.57974993586 92.898 2 0.14714528166587137 0.0009750720705443446 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 74137 12951 NHYGGVVSL True PC9_epitope_Rep5 944.4715801643599 944.47048993586 54.826 2 0.1471444467256661 0.0009750720705443446 0.9438714419765777 ['SPACA9|p.A130G|1|0.27|ENSG00000165698|chr9:132888331-132888331|C/G|missense_variant', 'nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 85683 16575 QLREAFEQL True PC9_epitope_Rep1 1132.5876725457597 1132.58656993586 68.578 2 0.14714069854161066 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ENSG00000122952|ENST00000373944|ZWINT'] 102767 4940 SQEGRPVQV True PC9_epitope_Rep5 998.5145076054997 998.51340993586 24.038 2 0.1471404969212101 0.0009750720705443446 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 48544 8433 KEGEFTLSA True H1975_Epitope_Rep2 980.4814761417199 980.48036993586 37.389 2 0.14714021507728695 0.0009750720705443446 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 91108 12443 RLMNDMTAV True PC9_epitope_Rep2 1049.49978614149 1049.49868993586 53.167 2 0.14713326862429005 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 76544 12801 NTDPSIVMTY True H1975_Epitope_Rep1 1139.51687567427 1139.5157699358601 54.302 2 0.14712634816397516 0.0009750720705443446 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000426186.1_3_2:87098444-87121919:+|nuORF'] 93783 19986 RTVELFYDV True PC9_epitope_Rep1 1140.5815245361598 1140.5804299358601 81.701 2 0.14712614049015527 0.0009750720705443446 0.9438714419765777 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF', 'ENST00000489654.1_1_7:142960606-142961286:+|nuORF', 'ENST00000473649.1_1_7:142960606-142961786:+|nuORF', 'nc|ENSG00000197448|Q9Y2Q3-4|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-3|GSTK1', 'ENSG00000197448|ENST00000358406|GSTK1', 'nc|ENSG00000197448|Q9Y2Q3-2|GSTK1'] 17174 14508 EHAFAVQQL True PC9_epitope_Rep3 1041.5243440132099 1041.5232499358601 60.926 2 0.14711786937131716 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 8715 18678 AVDLTLPKV True PC9_epitope_Rep2 954.57498260374 954.57388993586 77.211 2 0.14711465622934164 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 17776 21495 EHVLLVSIL True PC9_epitope_Rep1 1021.61718176889 1021.61608993586 87.524 2 0.1471109062951428 0.0009750720705443446 0.9438714419765777 ['ENSG00000146909|ENST00000275820|NOM1'] 102768 5034 SQEGRPVQV True PC9_epitope_Rep5 998.5145076054997 998.51340993586 24.394 2 0.14710648830375367 0.0009750720705443446 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 87659 7237 QVASTLKQV True PC9_epitope_Rep3 972.5603951687598 972.55928993586 32.848 2 0.14710463247206224 0.0009750720705443446 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 88771 11769 RDIVQFVP True NCI_RA007_Epitope_Rep5 972.53926580136 972.53816993586 51.927 2 0.14710426653922692 0.0009750720705443446 0.9438714419765777 ['ENSG00000124772|ENST00000244751|CPNE5', 'nc|ENSG00000124772|Q9HCH3-2|CPNE5', 'ENST00000473373.1_1_20:34214440-34214716:-|nuORF', 'ENST00000514439.1_1_3:131254041-131261643:-|nuORF', 'ENST00000567011.1_1_16:57179810-57181567:+|nuORF', 'ENST00000401607.6_1_20:34214165-34218368:-|nuORF', 'ENST00000460657.1_1_14:24546029-24546936:+|nuORF', 'ENST00000557829.1_1_14:24545691-24546719:+|nuORF', 'ENST00000558995.5_1_14:24543475-24546936:+|nuORF', 'ENSG00000139117|ENST00000331366|CPNE8', 'ENST00000546603.5_1_12:39047686-39073432:-|nuORF', 'nc|ENSG00000139117|Q86YQ8-2|CPNE8', 'ENSG00000144550|ENST00000383832|CPNE9', 'ENSG00000214078|ENST00000397443|CPNE1', 'ENSG00000085719|ENST00000517490|CPNE3', 'nc|ENSG00000178773|Q9UBL6|CPNE7', 'ENSG00000178773|ENST00000319518|CPNE7', 'ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant', 'nc|ENSG00000140848|Q96FN4-2|CPNE2', 'ENSG00000100884|ENST00000689861|CPNE6', 'nc|ENSG00000100884|O95741-2|CPNE6', 'ENSG00000196353|ENST00000429747|CPNE4', 'nc|ENSG00000196353|Q96A23-2|CPNE4', 'ENST00000483495.5_1_20:34214165-34218616:-|nuORF'] 89626 9715 RETETVFVP True NCI_RA007_Epitope_Rep1 1076.5502244078798 1076.54912993586 41.789 2 0.14710319088592277 0.0009750720705443446 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 74109 12637 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 53.479 2 0.1470979227224512 0.0009750720705443446 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 44967 8461 IQHPSNVL True PC9_epitope_Rep1 906.49231560894 906.49120993586 37.381 2 0.14709530797449466 0.0009750720705443446 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 74141 14740 NHYNMQYAL True PC9_epitope_Rep3 1152.50222866964 1152.50112993586 61.835 2 0.1470947798262388 0.0009750720705443446 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2'] 9192 17142 AVPEIMDRI True PC9_epitope_Rep4 1042.5481162329 1042.5470099358602 73.942 2 0.1470944579114671 0.0009750720705443446 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 106661 22121 SYADQMFLL True PC9_epitope_Rep4 1086.50558271458 1086.5044899358602 93.305 2 0.14709258556093785 0.0009750720705443446 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 88945 6001 REDFKTAVV True H1975_Epitope_Rep2 1063.56620882519 1063.5651099358602 28.062 2 0.14708852685265866 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-4|EFCAB11', 'ENST00000555070.1_1_14:89878823-90420935:-|nuORF'] 136498 15139 YHISLEHEIL True PC9_epitope_Rep6 1252.64518742188 1252.6435349037902 70.298 3 0.1470869124403069 0.0009750720705443446 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant'] 112567 9679 TPALIALR True H1975_Epitope_Rep1 853.53853752537 853.53744993586 42.155 2 0.14708464902739243 0.0009750720705443446 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 132734 21490 VYSIVPQSW True PC9_epitope_Rep3 1077.54949613189 1077.54897496793 87.953 1 0.14708386050254332 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 1047 8024 AEAIKAWTA True H1975_Epitope_Rep2 959.5076313199099 959.50652993586 35.812 2 0.1470833502460837 0.0009750720705443446 0.9438714419765777 ['ENST00000565493.1_1_20:34638316-34638640:-|nuORF'] 117068 13205 TYQSITERI True PC9_epitope_Rep3 1109.57168812845 1109.5705899358602 55.829 2 0.14708300027583773 0.0009750720705443446 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.E327Gfs*21|1|0.11|ENSG00000131558|chr7:133356539-133356540|-/G|frameshift_variant'] 28765 7117 FTATRPGVY True H1975_Epitope_Rep3 1010.5185303567798 1010.51742993586 32.346 2 0.14707009096845272 0.0009750720705443446 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 54186 7885 KYPDRVPVI True NCI_RA007_Epitope_Rep3 1085.62332977849 1085.62222993586 38.131 2 0.1470672564280047 0.0009750720705443446 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 8010 11524 ATDPVTGDLY True H1975_Epitope_Rep1 1050.48695544498 1050.48637496793 49.312 1 0.1470604807031461 0.0009750720705443446 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 9414 6700 AVVIVDDR True PC9_epitope_Rep6 885.4919812557699 885.49088993586 34.531 2 0.1470593806390405 0.0009750720705443446 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 21368 19395 ERLSYTQLL True PC9_epitope_Rep3 1121.6080736371698 1121.6069699358602 79.826 2 0.14705758861811277 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 117400 10081 VADGYPVRL True NCI_RA007_Epitope_Rep1 988.5341804209199 988.53308993586 43.222 2 0.14705704585369028 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 12641 8158 DLEGLSQR True PC9_epitope_Rep4 916.46140940348 916.46030993586 38.834 2 0.14705653841520305 0.0009750720705443446 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 113509 11202 TQTAVITRI True PC9_epitope_Rep1 1001.5869442697699 1001.58584993586 47.97 2 0.14705201808889273 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 21617 12456 ERSPVIQTL True PC9_epitope_Rep1 1041.58185888933 1041.5807699358602 52.777 2 0.14704861675565895 0.0009750720705443446 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.G10576W|1|0.15|ENSG00000181143|chr19:8939229-8939229|C/A|missense_variant'] 41163 20793 HYSPIYLSF True PC9_epitope_Rep3 1125.5494961318898 1125.54838993586 85.251 2 0.14704822830101044 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 40881 6515 HVLVTLGEK True PC9_epitope_Rep6 994.58113061334 994.58002993586 33.732 2 0.14704521219325606 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 75968 18017 NRGQFFTVY True PC9_epitope_Rep5 1130.55089311422 1130.5497899358602 74.318 2 0.14703716725951094 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000587673.5_1_19:1109158-1109530:-|nuORF'] 2380 10976 AEQIARWIA True H1975_Epitope_Rep2 1056.5716285587998 1056.5705299358601 47.246 2 0.1470365470777712 0.0009750720705443446 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF'] 42634 4963 IETNHNLPP True H1975_Epitope_Rep2 1033.5192586327698 1033.5181699358602 24.173 2 0.14703554253847423 0.0009750720705443446 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 47416 8602 IYIKQIKTF True NCI_RA007_Epitope_Rep3 1152.6906810623198 1152.6890249037901 40.912 3 0.14703223230094947 0.0009750720705443446 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 132299 13859 VYLPGSRQTL True PC9_epitope_Rep1 1132.62405805448 1132.62296993586 58.149 2 0.14702904655219817 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 44150 23226 ILPPQLALF True PC9_epitope_Rep5 1010.6164534928998 1010.61534993586 94.322 2 0.14702832953367057 0.0009750720705443446 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 138161 9831 YQNENEVGV True PC9_epitope_Rep1 1050.4618033262998 1050.4607099358602 42.676 2 0.1470278255116101 0.0009750720705443446 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 64618 14375 LREPLPATL True PC9_epitope_Rep4 1008.59678067748 1008.59568993586 63.202 2 0.14702369388946052 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 102954 11982 SQIPAQPSV True PC9_epitope_Rep5 925.48689587533 925.4863449679301 51.085 1 0.14702196353699037 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 28827 11843 FTDIDGQVY True H1975_Epitope_Rep1 1056.4763907612798 1056.47587496793 50.551 1 0.14702035050108442 0.0009750720705443446 0.9438714419765777 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 103722 6121 SREESAGPAL True PC9_epitope_Rep5 1015.4934378077497 1015.49234993586 28.529 2 0.1470172390928869 0.0009750720705443446 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 2238 11687 AENVPPVIP True H1975_Epitope_Rep1 934.5123823471799 934.51128993586 49.944 2 0.14700850624273282 0.0009750720705443446 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 109778 11618 THISDTSVVL True PC9_epitope_Rep6 1070.56078909158 1070.5596899358602 55.811 2 0.14700598776573687 0.0009750720705443446 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 1846 10864 AEIEELTASA True H1975_Epitope_Rep3 1032.4975201286798 1032.49642993586 46.87 2 0.14700479536356792 0.0009750720705443446 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B'] 129898 5067 VTLTSEEEAR True H1975_Epitope_Rep3 1133.5564319871298 1133.55532993586 24.61 2 0.1470018299911232 0.0009750720705443446 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 40419 6074 HRYGDGGSTF True PC9_epitope_Rep1 1095.4733710695098 1095.4722699358601 28.177 2 0.14699695198586357 0.0009750720705443446 0.9438714419765777 ['ENSG00000169045|ENST00000393432|HNRNPH1', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF', 'HNRNPH1|p.Q284R|1|0.16|ENSG00000169045|chr5:179617869-179617869|T/C|missense_variant'] 109683 6906 THEEAVTAL True PC9_epitope_Rep6 969.4767251144499 969.47562993586 35.484 2 0.14699346770654084 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 13903 12674 DRDPTAYAL True PC9_epitope_Rep2 1020.4876241513199 1020.48652993586 54.059 2 0.14698376760857146 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 26039 21171 FHDHALMIIF True PC9_epitope_Rep5 1242.6219498795 1242.6208499358602 86.484 2 0.14698113492637746 0.0009750720705443446 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 132968 21319 VYVDDIYVI True PC9_epitope_Rep4 1097.56447748969 1097.5633899358602 90.17 2 0.14698072543418986 0.0009750720705443446 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 95467 10349 SALSGHLETV True PC9_epitope_Rep4 1012.5189242796 1012.51782993586 47.503 2 0.14697738394996077 0.0009750720705443446 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 114427 10324 TSDVGGYYY True H1975_Epitope_Rep2 1023.4185415319901 1023.41797496793 44.72 1 0.14697670429510185 0.0009750720705443446 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 94899 10554 RYPDRITLI True NCI_RA007_Epitope_Rep2 1145.65569253593 1145.65458993586 45.65 2 0.1469738812590391 0.0009750720705443446 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 105621 7436 SVFAGVGER True NCI_RA007_Epitope_Rep4 920.4715801643599 920.47048993586 35.246 2 0.1469732836933984 0.0009750720705443446 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 108942 5365 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.43850993586 25.679 2 0.14697327649982875 0.0009750720705443446 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 1952 11982 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47456993586 51.246 2 0.14697272041867118 0.0009750720705443446 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 47868 12253 IYTNLNQKI True PC9_epitope_Rep5 1105.61315901761 1105.61206993586 52.119 2 0.14697203789600613 0.0009750720705443446 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 88466 19923 QYVVDLTSF True PC9_epitope_Rep6 1070.5284263341398 1070.52732993586 89.292 2 0.14696621531150267 0.0009750720705443446 0.9438714419765777 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 98067 18785 SHVDLVVMV True PC9_epitope_Rep2 997.52665251233 997.52554993586 77.627 2 0.14695742615327756 0.0009750720705443446 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 6612 18876 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 77.626 2 0.14693112012174356 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 109991 20003 THSQFIVVSL True PC9_epitope_Rep3 1129.6131590176099 1129.61206993586 82.187 2 0.1469294683929007 0.0009750720705443446 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 84537 14706 QHADPPVQIL True PC9_epitope_Rep1 1116.5927579262 1116.5916699358602 61.386 2 0.14692548471948186 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 38648 9169 HHMGGMAGL True PC9_epitope_Rep3 909.3949271501299 909.39382993586 40.209 2 0.14692389956682467 0.0009750720705443446 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 93649 16781 RTFDETVSTYV True PC9_epitope_Rep4 1316.62484590012 1316.6237499358601 72.517 2 0.14692161354845407 0.0009750720705443446 0.9438714419765777 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 89096 9244 REFDGIGAV True NCI_RA007_Epitope_Rep3 962.4821448480598 962.48104993586 43.462 2 0.1469199164204226 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC'] 72083 13271 M[Oxidation]RDPIRILV True PC9_epitope_Rep4 1127.64849936095 1127.64685490379 58.942 3 0.14691554096885387 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 8265 4263 ATIQGAYAR True NCI_RA007_Epitope_Rep3 949.4981292653698 949.49702993586 23.464 2 0.14691350111156828 0.0009750720705443446 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 75049 7666 NMEADPGQY True H1975_Epitope_Rep3 1023.3967605415899 1023.3956699358599 34.469 2 0.1469128372471052 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 52313 12097 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54290993586 51.572 2 0.1469086724278854 0.0009750720705443446 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 40239 15608 HRIFEPNCL True PC9_epitope_Rep3 1127.5545985956699 1127.5535099358601 65.185 2 0.14690689333286644 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF'] 75377 18268 NQDKNFAFL True PC9_epitope_Rep1 1095.53490869691 1095.53380993586 75.058 2 0.14689807551545214 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 101996 20754 SPNSYFMDV True PC9_epitope_Rep1 1058.43789707758 1058.43737496793 84.657 1 0.14689410548887805 0.0009750720705443446 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 46165 11884 ITDDLHFY True H1975_Epitope_Rep2 1022.47091145802 1022.4698099358601 50.792 2 0.14689072676453407 0.0009750720705443446 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 108523 5431 TEFPSKQV True H1975_Epitope_Rep3 934.4759968384598 934.47488993586 25.95 2 0.14688728299497592 0.0009750720705443446 0.9438714419765777 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 139802 21684 YVDDGLISL True PC9_epitope_Rep5 993.5018772331299 993.50132496793 88.455 1 0.1468816560448705 0.0009750720705443446 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 6120 9493 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 41.464 2 0.1468807681777238 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 98429 19496 SIIQRLLEV True PC9_epitope_Rep6 1069.64954452633 1069.64844993586 87.653 2 0.1468800955741168 0.0009750720705443446 0.9438714419765777 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 35387 7097 GTDDGKVGLY True H1975_Epitope_Rep2 1023.48728979815 1023.4861899358599 32.23 2 0.14687058132793546 0.0009750720705443446 0.9438714419765777 ['ENSG00000082516|ENST00000285873|GEMIN5', 'GEMIN5|p.E1125Sfs*36|1|0.24|ENSG00000082516|chr5:154896316-154896316|C/-|frameshift_variant', 'GEMIN5|p.P480Hfs*63|1|0.14|ENSG00000082516|chr5:154921368-154921368|C/-|frameshift_variant'] 6390 20048 APRTVLLLLSA True PC9_epitope_Rep4 1152.7230438197598 1152.72194993586 85.251 2 0.14686397391551723 0.0009750720705443446 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 113315 15896 TQILSVPKV True PC9_epitope_Rep2 983.6015317047498 983.60042993586 66.398 2 0.14684998692038637 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 123076 14821 VHAELADVL True PC9_epitope_Rep6 965.5181960036099 965.51708993586 68.98 2 0.14683812202929164 0.0009750720705443446 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 73221 7352 NEGVATYAAA True H1975_Epitope_Rep2 965.4454249861698 965.4448749679301 33.22 1 0.1468365646702762 0.0009750720705443446 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 38031 2742 HEISEGNVATA True H1975_Epitope_Rep2 1126.52546621202 1126.52436993586 14.592 2 0.14683403240529855 0.0009750720705443446 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1'] 138095 16447 YQFGEIRTI True PC9_epitope_Rep6 1125.5818588893299 1125.5807699358602 75.673 2 0.14683248080757033 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 45992 10951 ISTEVNPKL True PC9_epitope_Rep3 999.56006081559 999.55896993586 47.104 2 0.14683238531374385 0.0009750720705443446 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 97999 12557 SHSPPLLQV True PC9_epitope_Rep4 976.53418042092 976.53308993586 56.124 2 0.14682549563698544 0.0009750720705443446 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 54104 19617 KYMDVQFDF True PC9_epitope_Rep4 1191.52704643515 1191.5259499358601 83.573 2 0.14682522197835887 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 72758 18447 NADPILISLK True PC9_epitope_Rep1 1082.63356010902 1082.6324699358602 75.747 2 0.14681809533941975 0.0009750720705443446 0.9438714419765777 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 73614 21829 NGFPVFATV True PC9_epitope_Rep5 950.48616759934 950.48506993586 88.997 2 0.146816164413165 0.0009750720705443446 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 68667 14245 LVAVELEKV True PC9_epitope_Rep6 998.6011973515799 998.60010993586 66.685 2 0.1468160217957471 0.0009750720705443446 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 34464 14088 GQDEPLIHV True PC9_epitope_Rep5 1006.5083595958998 1006.50726993586 59.2 2 0.14681481095773877 0.0009750720705443446 0.9438714419765777 ['ENSG00000157778|ENST00000288607|PSMG3'] 42358 8678 IELVSNSA True H1975_Epitope_Rep2 831.4337976733101 831.43324496793 38.341 1 0.14680550649333765 0.0009750720705443446 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 72174 17040 MRMLAEDEL True PC9_epitope_Rep5 1106.51001647202 1106.5089099358602 70.563 2 0.14680414928131316 0.0009750720705443446 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 38714 7729 HHSNLIAGM True PC9_epitope_Rep2 978.47053461854 978.46942993586 35.104 2 0.1467963825382114 0.0009750720705443446 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 71373 9608 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep2 983.4269984211501 983.42644496793 41.933 1 0.1467957837734349 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 110084 20901 TIAEGLTLAQV True PC9_epitope_Rep3 1114.62338934814 1114.6228749679299 85.671 1 0.1467935750490014 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 40269 7622 HRNEVTVEL True PC9_epitope_Rep4 1095.56727145435 1095.5661699358602 36.699 2 0.14679290408117057 0.0009750720705443446 0.9438714419765777 ['KPNA3|p.N437Kfs*8|1|0.2|ENSG00000102753|chr13:49705682-49705683|-/T|frameshift_variant', 'ENSG00000102753|ENST00000261667|KPNA3'] 69638 19824 LVVGDIAQV True PC9_epitope_Rep5 912.5280324113199 912.52692993586 81.299 2 0.14678075529893442 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000067842|Q16720-8|ATP2B3', 'nc|ENSG00000067842|Q16720-7|ATP2B3', 'nc|ENSG00000067842|Q16720-6|ATP2B3', 'nc|ENSG00000067842|Q16720-3|ATP2B3', 'nc|ENSG00000067842|Q16720-5|ATP2B3', 'nc|ENSG00000067842|Q16720-2|ATP2B3', 'ATP2B3|p.P1175Rfs*12|1|0.2|ENSG00000067842|chrX:153580153-153580153|C/-|frameshift_variant', 'nc|ENSG00000067842|Q16720-4|ATP2B3', 'ENSG00000067842|ENST00000263519|ATP2B3'] 87326 12622 QTALVELLK True NCI_RA007_Epitope_Rep1 1013.6120963884499 1013.61098993586 53.077 2 0.1467674529703101 0.0009750720705443446 0.9438714419765777 ['CON__P02769'] 71991 12971 MQDDNQVMV True PC9_epitope_Rep1 1078.44233083502 1078.44122993586 54.764 2 0.14676716204055865 0.0009750720705443446 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 102936 21058 SQIISLQTL True PC9_epitope_Rep5 1001.5757108797301 1001.57517496793 86.059 1 0.14676660922426135 0.0009750720705443446 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 127047 18428 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 75.674 2 0.14676585745426515 0.0009750720705443446 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 68812 8982 LVDSKGFDEY True H1975_Epitope_Rep2 1171.5397192938299 1171.5386299358602 39.503 2 0.1467643062984778 0.0009750720705443446 0.9438714419765777 ['ENSG00000164687|ENST00000297258|FABP5'] 6594 19381 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 79.358 2 0.14675665800778553 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 41078 17489 HYLDTTTLI True PC9_epitope_Rep4 1075.55497543515 1075.5538699358601 75.272 2 0.14674526319534634 0.0009750720705443446 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 88938 7249 REDENLQVP True H1975_Epitope_Rep1 1098.53055159246 1098.5294499358602 32.893 2 0.1467424156173668 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF'] 87062 11432 QSDYYASYY True H1975_Epitope_Rep2 1158.4505699362599 1158.4499749679298 49.026 1 0.1467376313341134 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 76714 6734 NTPILVDGK True NCI_RA007_Epitope_Rep1 955.5338460677499 955.53274993586 30.205 2 0.14673005185322863 0.0009750720705443446 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 127064 18124 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 74.724 2 0.14672929608393068 0.0009750720705443446 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 138483 15993 YRGQFPEL True PC9_epitope_Rep1 1008.5028802926398 1008.50178993586 66.327 2 0.1467250097185328 0.0009750720705443446 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 124257 20447 VLDDKLVFV True PC9_epitope_Rep1 1046.60119735158 1046.60010993586 83.459 2 0.14672485051411085 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 136338 12290 YHAQMPDSL True PC9_epitope_Rep2 1060.46478053176 1060.4636899358602 52.583 2 0.14672257114832937 0.0009750720705443446 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 26270 12541 FIDASRLVY True H1975_Epitope_Rep3 1082.5760452329 1082.57494993586 53.438 2 0.14672067800206615 0.0009750720705443446 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'CTNNA1|p.L776Pfs*102|1|0.11|ENSG00000044115|chr5:138932603-138932604|-/C|frameshift_variant', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 15314 18537 EAITHLLGV True PC9_epitope_Rep4 951.5389314481898 951.53782993586 79.377 2 0.14671827299182488 0.0009750720705443446 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 21697 9440 ERYKEVAEL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 41.168 2 0.1467153265151786 0.0009750720705443446 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 111021 15698 TLDLIDEAY True H1975_Epitope_Rep2 1051.50735653639 1051.50624993586 65.551 2 0.14670919046671457 0.0009750720705443446 0.9438714419765777 ['ENSG00000086504|ENST00000199706|MRPL28', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:418974-419244:-|nuORF'] 91802 15195 RPLLPSENITA True PC9_epitope_Rep5 1209.6717365228901 1209.67062993586 63.454 2 0.14670735637554333 0.0009750720705443446 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 54229 21849 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61157496793 88.852 1 0.14669184777449693 0.0009750720705443446 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 29454 8228 FVHPGAATV True PC9_epitope_Rep2 897.4708518883699 897.46974993586 37.007 2 0.14669121388410286 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 108369 9138 TEDPNQLTV True H1975_Epitope_Rep2 1015.4822044177099 1015.48110993586 40.101 2 0.14668887384685841 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2', 'NFE2L2|p.S270L|1|0.31|ENSG00000116044|chr2:177231794-177231794|G/A|missense_variant'] 19948 11328 EMDNYEPGVY True H1975_Epitope_Rep2 1215.47540478511 1215.4743099358602 48.622 2 0.14668718493321992 0.0009750720705443446 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'CTNNA1|p.L776Pfs*102|1|0.11|ENSG00000044115|chr5:138932603-138932604|-/C|frameshift_variant'] 90559 13564 RKFWAGIVF True NCI_RA007_Epitope_Rep5 1122.6338348925399 1122.6327299358602 58.861 2 0.1466860817713037 0.0009750720705443446 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1'] 7477 17247 ASDSIVLFY True H1975_Epitope_Rep2 1013.5069626135701 1013.50637496793 71.632 1 0.14668183596273407 0.0009750720705443446 0.9438714419765777 ['TXNDC16|p.W800Lfs*3|1|0.17|ENSG00000087301|chr14:52432383-52432384|-/A|frameshift_variant', 'ENSG00000087301|ENST00000281741|TXNDC16'] 54184 7708 KYPDRVPVI True NCI_RA007_Epitope_Rep3 1085.62332977849 1085.62222993586 37.441 2 0.14668078904004722 0.0009750720705443446 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 35926 9102 GVAPFTIAR True NCI_RA007_Epitope_Rep3 930.5287011176599 930.52760993586 42.888 2 0.14668048539760362 0.0009750720705443446 0.9438714419765777 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 113011 10528 TPTLVEVSR True PC9_epitope_Rep5 1000.55530978832 1000.55420993586 45.484 2 0.14668002475491454 0.0009750720705443446 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 125172 15347 VLQALEGLK True PC9_epitope_Rep1 969.5858816406098 969.58478993586 63.85 2 0.14667985311579027 0.0009750720705443446 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 21619 12498 ERSPVIQTL True PC9_epitope_Rep3 1041.58185888933 1041.5807699358602 53.099 2 0.14667778640338625 0.0009750720705443446 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.G10576W|1|0.15|ENSG00000181143|chr19:8939229-8939229|C/A|missense_variant'] 36399 16696 GVIDGHIYAV True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 69.47 2 0.1466768578743414 0.0009750720705443446 0.9438714419765777 ['TYK2-KEAP1|1|fusion', 'KEAP1|p.V418L|1|0.32|ENSG00000079999|chr19:10491650-10491650|C/A|missense_variant', 'KEAP1|p.N469Kfs*11|1|0.54|ENSG00000079999|chr19:10489772-10489773|-/T|frameshift_variant', 'KEAP1|p.R596Efs*2|1|0.17|ENSG00000079999|chr19:10486741-10486741|G/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1'] 102676 4737 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 23.311 2 0.14667684842145373 0.0009750720705443446 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 30541 19257 GAIPRLVQL True PC9_epitope_Rep5 965.6022004110898 965.60110993586 79.113 2 0.14667134826244543 0.0009750720705443446 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 30119 11089 FYQEHPDL True PC9_epitope_Rep2 1047.4661604307498 1047.4650699358601 47.979 2 0.14666429408215995 0.0009750720705443446 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 131940 13322 VYFPDQHINF True NCI_RA007_Epitope_Rep4 1278.6033226099 1278.6022299358601 58.393 2 0.14665652623695716 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 115460 7519 TVFSHAQTV True PC9_epitope_Rep4 988.4977949121999 988.49668993586 36.289 2 0.14665205704901702 0.0009750720705443446 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 116645 21867 TYIPGTQITF True PC9_epitope_Rep1 1139.58627556343 1139.5851699358602 88.923 2 0.14665116983179555 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 31212 18736 GDLENAFLNL True H1975_Epitope_Rep1 1104.54513902744 1104.54457496793 78.127 1 0.14665083979979895 0.0009750720705443446 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 97717 8806 SHEEVVQTL True PC9_epitope_Rep2 1040.5138388991597 1040.51274993586 39.226 2 0.1466326511515451 0.0009750720705443446 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 44220 17607 ILSKDGVLYV True PC9_epitope_Rep5 1105.63831113629 1105.63720993586 72.734 2 0.14663024385490095 0.0009750720705443446 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000454465.1_1_2:87398353-87423749:+|nuORF'] 27313 13237 FM[Oxidation]DPASALY True H1975_Epitope_Rep1 1029.44773386573 1029.4471749679299 56.014 1 0.1466300606488907 0.0009750720705443446 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 73832 8172 NHDYSYTV True PC9_epitope_Rep2 997.4141248578901 997.41302993586 36.789 2 0.14662990125877653 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant'] 75995 21252 NRIQDLLEL True PC9_epitope_Rep1 1112.61897267404 1112.6178699358602 86.569 2 0.1466298607764793 0.0009750720705443446 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 294 10272 AAHIFNEAL True NCI_RA007_Epitope_Rep5 984.50288029264 984.50178993586 46.142 2 0.14662177369777765 0.0009750720705443446 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 24010 19535 EYPELRGVF True PC9_epitope_Rep2 1108.5553097883198 1108.5542099358602 80.525 2 0.14661348248019535 0.0009750720705443446 0.9438714419765777 ['ENST00000409011.5_2_2:39005336-39005417:+|nuORF'] 76489 10864 NTDFYQTSY True H1975_Epitope_Rep2 1137.46146897313 1137.4608749679298 46.818 1 0.14661276736529408 0.0009750720705443446 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 114428 10523 TSDVGGYYY True H1975_Epitope_Rep2 1023.4185415319901 1023.41797496793 45.498 1 0.1466049487277269 0.0009750720705443446 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 105620 6935 SVFAGVGER True NCI_RA007_Epitope_Rep3 920.4715801643599 920.47048993586 34.387 2 0.14660355394891159 0.0009750720705443446 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 110086 20027 TIAEGLTLAQV True PC9_epitope_Rep4 1114.62338934814 1114.6228749679299 85.17 1 0.1466009053633349 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 106659 22835 SYADQMFLL True PC9_epitope_Rep2 1086.50558271458 1086.5044899358602 93.324 2 0.14659861482131376 0.0009750720705443446 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 32070 8425 GEVTQGFAA True H1975_Epitope_Rep2 878.4133965818997 878.41284496793 37.358 1 0.14657934090531907 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF', 'ENSG00000197763|ENST00000524230|TXNRD3', 'ENST00000518740.5_2_3:126326756-126328052:-|nuORF', 'ENST00000524230.6_3_3:126326756-126373974:-|nuORF'] 25353 14338 FEGIVTDLIR True H1975_Epitope_Rep3 1161.63937376545 1161.63826993586 60.499 2 0.14656499179100077 0.0009750720705443446 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 118721 6596 VEDARGFTP True H1975_Epitope_Rep2 990.4770594676199 990.47596993586 30.282 2 0.1465618565710497 0.0009750720705443446 0.9438714419765777 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 7224 19569 ARDSLPVLL True PC9_epitope_Rep1 982.58113061334 982.58002993586 80.097 2 0.14655300802000507 0.0009750720705443446 0.9438714419765777 ['ENST00000494870.5_1_X:2838537-2847316:-|nuORF', 'nc|ENSG00000006756|P51689-2|ARSD', 'nc|ENSG00000006756|P51689-3|ARSD', 'ENSG00000006756|ENST00000381154|ARSD'] 7027 10451 AQSESILKV True PC9_epitope_Rep4 973.54441075145 973.54330993586 47.91 2 0.14655007269536396 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 133217 7330 WEDEGVRAC True H1975_Epitope_Rep2 1063.4392940599098 1063.43818993586 33.135 2 0.14654497896280258 0.0009750720705443446 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 120298 10596 VFPEKGYSF True NCI_RA007_Epitope_Rep3 1072.5229470308798 1072.52184993586 48.728 2 0.14654379906684178 0.0009750720705443446 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 113217 20572 TQDSSILPL True PC9_epitope_Rep5 972.5127762699999 972.51166993586 84.177 2 0.1465427441726862 0.0009750720705443446 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 7948 7016 ATDINGDDY True H1975_Epitope_Rep2 982.3879696796998 982.3874249679301 31.912 1 0.14654196986816642 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 36707 5934 GVMRVGLVAK True NCI_RA007_Epitope_Rep3 1028.6164705762396 1028.6153699358601 30.321 2 0.1465378191693602 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 16468 12245 EELSNVLAA True H1975_Epitope_Rep1 944.4814761417199 944.48092496793 52.122 1 0.14653400343212475 0.0009750720705443446 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 95970 9849 SEADIRGFVAA True NCI_RA007_Epitope_Rep3 1134.56693710118 1134.5658499358601 45.813 2 0.1465328981271646 0.0009750720705443446 0.9438714419765777 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 136801 7013 YISSDGSY True H1975_Epitope_Rep3 890.3657776831401 890.3652249679301 31.94 1 0.14653227600580065 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000164631|P17014-2|ZNF12', 'ENSG00000164631|ENST00000405858|ZNF12', 'nc|ENSG00000164631|P17014-4|ZNF12', 'nc|ENSG00000164631|P17014-5|ZNF12'] 76113 6400 NRPGTVSSL True PC9_epitope_Rep5 929.49304388493 929.49194993586 29.594 2 0.14653161901917788 0.0009750720705443446 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 140664 15122 YYPSTPGRYSI True PC9_epitope_Rep1 1302.6244519773 1302.62334993586 62.987 2 0.14652685158521522 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 132596 12746 VYPPPHQVF True PC9_epitope_Rep5 1082.5549158654999 1082.55380993586 54.034 2 0.14652466155155786 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 89623 9228 RETETVFVP True H1975_Epitope_Rep3 1076.5502244078798 1076.54912993586 40.487 2 0.1465205020959166 0.0009750720705443446 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 104793 4901 STDPSVLGK True NCI_RA007_Epitope_Rep4 902.4709114580199 902.46980993586 25.308 2 0.14651869391512723 0.0009750720705443446 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 17731 7340 EHSTEGSVSL True PC9_epitope_Rep5 1044.47236801 1044.4712699358602 33.193 2 0.14651719514347925 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 99095 11704 SLAEGLRTV True PC9_epitope_Rep2 944.52909504048 944.52798993586 50.351 2 0.14651332180955925 0.0009750720705443446 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 66602 5874 LSSPATLNSR True PC9_epitope_Rep6 1044.5563724174801 1044.55526993586 30.838 2 0.14651104465826967 0.0009750720705443446 0.9438714419765777 ['CON__P00761'] 25311 7168 FEELDRPAA True H1975_Epitope_Rep3 1046.50327421546 1046.5021699358601 32.546 2 0.14650570140859798 0.0009750720705443446 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 44705 21010 IPNSIMTILEA True PC9_epitope_Rep6 1200.6424105405601 1200.6413099358601 93.639 2 0.14649995545789513 0.0009750720705443446 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 26084 17039 FHEGDVITL True PC9_epitope_Rep2 1029.51311062317 1029.51200993586 70.792 2 0.14649732992758407 0.0009750720705443446 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 34868 12465 GQVIKGIGV True PC9_epitope_Rep1 869.5334521449298 869.53234993586 52.812 2 0.14649519200343242 0.0009750720705443446 0.9438714419765777 ['ENSG00000171497|ENST00000307720|PPID'] 57190 7278 LEESSPKLP True H1975_Epitope_Rep1 998.5284263341399 998.5273299358599 33.006 2 0.14648624362349996 0.0009750720705443446 0.9438714419765777 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000544007.5_1_14:31028384-31077115:+|nuORF'] 140596 15344 YYLTPDGQRF True PC9_epitope_Rep4 1258.59823722946 1258.5971499358602 66.954 2 0.1464857741854936 0.0009750720705443446 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 69274 14810 LVPEFVHNV True PC9_epitope_Rep6 1052.5654805492 1052.5643899358602 68.937 2 0.1464848482565451 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.M758Sfs*26|1|0.14|ENSG00000170921|chr17:63355299-63355303|GACAT/-|frameshift_variant'] 103918 15612 SRNEALIAL True PC9_epitope_Rep1 985.5556441414899 985.55454993586 64.871 2 0.14648484589720887 0.0009750720705443446 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'ENSG00000120756|ENST00000457734|PLS1'] 133275 12266 WEIENNPTV True H1975_Epitope_Rep3 1100.51383889916 1100.5132749679299 52.359 1 0.14647995506378927 0.0009750720705443446 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 106835 23030 SYIALPLTL True PC9_epitope_Rep3 989.57973363101 989.57862993586 93.853 2 0.14647806808417302 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 77458 15781 NYPDEFTKL True PC9_epitope_Rep4 1125.53423999057 1125.5331499358601 68.627 2 0.14647539797083872 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'NF1|p.H1943Rfs*17|3|0.12|ENSG00000196712|chr17:31334853-31334863|ACCTTTGTTTG/-|frameshift_variant', 'NF1|p.R1970Sfs*6|1|0.43|ENSG00000196712|chr17:31334931-31334932|AA/-|frameshift_variant', 'NF1|p.T2108Nfs*12|1|0.16|ENSG00000196712|chr17:31336808-31336809|-/A|frameshift_variant', 'NF1|p.G1807Afs*56|1|0.52|ENSG00000196712|chr17:31327648-31327648|G/-|frameshift_variant', 'nc|ENSG00000196712|P21359-3|NF1', 'NF1|p.I679Dfs*21|1|0.39|ENSG00000196712|chr17:31226459-31226460|-/C|frameshift_variant', 'ENST00000495910.6_1_17:29490228-29576996:+|nuORF', 'NF1|p.R1250Lfs*10|1|0.15|ENSG00000196712|chr17:31235648-31235658|CTCGGCATTTA/-|frameshift_variant', 'nc|ENSG00000196712|P21359-4|NF1', 'nc|ENSG00000196712|P21359-5|NF1'] 138139 21281 YQLEIPENFTT True PC9_epitope_Rep2 1353.6452469915296 1353.64414993586 87.32 2 0.14646064040669557 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 96451 11021 SEILYSAPP True H1975_Epitope_Rep3 975.49131254943 975.4907649679301 47.481 1 0.1464558147466068 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 126513 18215 VPNLQTVSV True PC9_epitope_Rep1 955.53384606775 955.53274993586 74.855 2 0.14645575903192548 0.0009750720705443446 0.9438714419765777 ['ENSG00000105866|ENST00000222584|SP4'] 132101 21750 VYILQPEVI True PC9_epitope_Rep5 1072.6168474157198 1072.61574993586 88.69 2 0.14645458408905182 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 43797 6802 IKIIAPPER True NCI_RA007_Epitope_Rep4 1035.64406522307 1035.64296993586 32.789 2 0.14644842432223915 0.0009750720705443446 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 21116 14397 ERDPSPWAV True PC9_epitope_Rep5 1055.50360856863 1055.5025099358602 60.378 2 0.1464478793087071 0.0009750720705443446 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 132440 16592 VYNPVRAEW True PC9_epitope_Rep3 1132.5665431783598 1132.5654499358602 68.958 2 0.14644276027288128 0.0009750720705443446 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6'] 114879 6139 TTDSSYGQNY True H1975_Epitope_Rep3 1134.4465471849799 1134.44544993586 28.625 2 0.1464346448857777 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 117048 20245 TYQQLFYLL True NCI_RA007_Epitope_Rep4 1187.6226610721499 1187.6215699358602 87.612 2 0.14642417413771402 0.0009750720705443446 0.9438714419765777 ['ENSG00000145703|ENST00000274364|IQGAP2', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 124190 18796 VLAETLTQV True PC9_epitope_Rep5 972.5491617787198 972.54806993586 77.311 2 0.14641733198778006 0.0009750720705443446 0.9438714419765777 ['CREBBP-TRAP1|1|fusion', 'CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 23788 20229 EYLADLYHF True PC9_epitope_Rep4 1169.5393253710101 1169.53822993586 85.951 2 0.1464161388934815 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 7053 16911 AQVALVNEV True PC9_epitope_Rep5 941.51819600361 941.51708993586 70.062 2 0.1464126023304904 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 26764 15119 FLDPASAGIGY True H1975_Epitope_Rep2 1109.53932537101 1109.53822993586 63.309 2 0.1464089794821761 0.0009750720705443446 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant'] 34439 17305 GQAFVIFK True PC9_epitope_Rep1 908.5119884243599 908.51088993586 71.379 2 0.14640839473148437 0.0009750720705443446 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 95074 8751 RYSPVLSRF True NCI_RA007_Epitope_Rep4 1123.61382772395 1123.6127299358602 40.457 2 0.14640660183262003 0.0009750720705443446 0.9438714419765777 ['ENSG00000166685|ENST00000299886|COG1'] 9425 21717 AVVPGLLEV True PC9_epitope_Rep5 895.5378688190299 895.53676993586 88.572 2 0.14640653767383857 0.0009750720705443446 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 99629 18389 SLFRVITEV True PC9_epitope_Rep6 1062.60734536118 1062.6062499358602 83.377 2 0.14640547513075491 0.0009750720705443446 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 82400 19130 PVAEYFSGV True PC9_epitope_Rep4 967.4650978015899 967.46400993586 81.676 2 0.1464027902823018 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 108595 4998 TEIGSIHSA True NCI_RA007_Epitope_Rep5 913.45051036661 913.44940993586 25.928 2 0.14639855334073154 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 72631 11154 MVVQDGIVKA True PC9_epitope_Rep4 1058.57941636118 1058.57830993586 50.682 2 0.14639835107789306 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 40290 10785 HRQEIQVVL True PC9_epitope_Rep2 1120.63529144452 1120.6341899358601 46.801 2 0.14639667286610739 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 124886 23254 VLLNEILEQV True PC9_epitope_Rep5 1168.67033954056 1168.66924993586 94.432 2 0.1463921674296238 0.0009750720705443446 0.9438714419765777 ['ENSG00000109805|ENST00000251496|NCAPG'] 116647 21601 TYIPGTQITF True PC9_epitope_Rep2 1139.58627556343 1139.5851699358602 88.562 2 0.14639017225359494 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 109879 13042 THMTAIVGM True PC9_epitope_Rep4 959.4568587003499 959.45576993586 58.06 2 0.14638998250606702 0.0009750720705443446 0.9438714419765777 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 107286 12863 SYQKVMALW True NCI_RA007_Epitope_Rep3 1124.5688516774799 1124.56774993586 57.854 2 0.1463890950764706 0.0009750720705443446 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 88924 6234 REDEISPPPP True H1975_Epitope_Rep1 1135.5509526838698 1135.54984993586 29.047 2 0.1463814557536379 0.0009750720705443446 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 110573 5740 TISETIER True NCI_RA007_Epitope_Rep2 947.4923751785899 947.49126993586 26.944 2 0.1463809822227841 0.0009750720705443446 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'TARS1|p.R699H|1|0.14|ENSG00000113407|chr5:33467632-33467632|G/A|missense_variant'] 48887 7635 KETFPGVTA True H1975_Epitope_Rep3 948.4916469025998 948.49054993586 34.35 2 0.1463775648060383 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000153029|Q95460-2|MR1', 'ENSG00000153029|ENST00000367580|MR1'] 30027 15853 FYHKYFNYL True PC9_epitope_Rep6 1293.61824439805 1293.6166049037902 73.249 3 0.14637287432987398 0.0009750720705443446 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 140560 20447 YYLNEIQSF True PC9_epitope_Rep4 1175.5498900547097 1175.54937496793 86.794 1 0.14636792620049235 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 98077 4841 SHVSGTTTL True PC9_epitope_Rep3 901.45051036661 901.44940993586 23.717 2 0.14635843271009683 0.0009750720705443446 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 21613 21268 ERSPLLFTL True PC9_epitope_Rep1 1074.60734536118 1074.6062499358602 86.632 2 0.1463499699188629 0.0009750720705443446 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 18284 8694 EITALAPSTM[Oxidation]K True PC9_epitope_Rep2 1176.6060254122801 1176.6049299358601 38.805 2 0.1463493477934863 0.0009750720705443446 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 106177 8673 SVPEGPWWRK True NCI_RA007_Epitope_Rep3 1240.63529144452 1240.6341899358601 41.196 2 0.14634835646699457 0.0009750720705443446 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 76053 17643 NRLFQENSVL True PC9_epitope_Rep5 1218.63568536734 1218.63458993586 72.875 2 0.1463482192896513 0.0009750720705443446 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 57119 4325 LEEPEEPK True H1975_Epitope_Rep3 969.46549172441 969.46438993586 21.754 2 0.14634801970594993 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000104131|O75822-3|EIF3J', 'ENSG00000104131|ENST00000261868|EIF3J', 'nc|ENSG00000104131|O75822-2|EIF3J'] 127321 18943 VQNDTLLQV True PC9_epitope_Rep3 1028.5502244078798 1028.5496749679298 78.089 1 0.14634391027696836 0.0009750720705443446 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 107506 10300 TAAPPAQPL True PC9_epitope_Rep1 864.4705175352 864.46942993586 44.503 2 0.14633992851846248 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 33099 7958 GKIVVQTEL True NCI_RA007_Epitope_Rep3 985.58079626017 985.57968993586 38.407 2 0.1463381272588988 0.0009750720705443446 0.9438714419765777 ['ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 105160 7359 STMGYMMAK True NCI_RA007_Epitope_Rep5 1018.4285953471799 1018.42748993586 34.986 2 0.14633464663300752 0.0009750720705443446 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 76221 17644 NRYEDALVL True PC9_epitope_Rep1 1091.56112344475 1091.56002993586 72.66 2 0.1463309756644642 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000567842.5_1_16:28138076-28157497:-|nuORF'] 21238 14532 ERGPVLQL True PC9_epitope_Rep1 910.5236157372199 910.52250993586 60.722 2 0.1463271913477911 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000076706|P43121-2|MCAM', 'ENST00000528533.5_1_11:119181936-119187838:-|nuORF', 'ENSG00000076706|ENST00000264036|MCAM'] 113573 19981 TRADLIFTV True PC9_epitope_Rep1 1034.5760452328998 1034.57494993586 81.682 2 0.1463236160966518 0.0009750720705443446 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 12663 20272 DLENAFLNL True H1975_Epitope_Rep1 1047.52367530687 1047.52256993586 84.324 2 0.14631764639645425 0.0009750720705443446 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 114159 14160 TRSSLEVEL True PC9_epitope_Rep5 1032.5451390274397 1032.5440499358601 59.477 2 0.14631584317537605 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'nc|ENSG00000257923|P39880-4|CUX1', 'ENSG00000257923|ENST00000292535|CUX1', 'nc|ENSG00000257923|P39880-2|CUX1', 'nc|ENSG00000257923|P39880-5|CUX1', 'nc|ENSG00000257923|P39880-3|CUX1', 'nc|ENSG00000257923|P39880-6|CUX1'] 75815 17553 NRDELELEL True PC9_epitope_Rep4 1129.5615173675699 1129.5604299358602 75.536 2 0.14631522209312567 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 107120 17770 SYM[Oxidation]GHFDLL True PC9_epitope_Rep4 1097.48518200361 1097.48408993586 76.381 2 0.14630461415308843 0.0009750720705443446 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 139819 6413 YVDGVEVH True NCI_RA007_Epitope_Rep1 916.42904664604 916.4279499358599 28.971 2 0.14630454290724 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 132437 20831 VYNPVIYVF True PC9_epitope_Rep6 1112.5906326678798 1112.5895299358601 92.899 2 0.1463044357564275 0.0009750720705443446 0.9438714419765777 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 46268 5764 ITDVKPGNY True H1975_Epitope_Rep2 1005.51311062317 1005.51200993586 27.165 2 0.1463023126382004 0.0009750720705443446 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX', 'ENST00000513319.5_1_5:121402440-121412860:-|nuORF', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3', 'ENSG00000115318|ENST00000264094|LOXL3'] 48755 6444 KEQEPMPTV True H1975_Epitope_Rep3 1057.5113963710098 1057.51028993586 29.762 2 0.14630207828576608 0.0009750720705443446 0.9438714419765777 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2', 'WDR18-HN1L|1|fusion'] 40830 14719 HVLDVIHEV True PC9_epitope_Rep2 1059.57129420563 1059.57018993586 61.885 2 0.14630025865192076 0.0009750720705443446 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 100001 22215 SLITRLLEV True PC9_epitope_Rep3 1042.63864548946 1042.63754993586 90.736 2 0.14628636879171092 0.0009750720705443446 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 34926 16054 GQWASVIRV True PC9_epitope_Rep6 1014.5610638750999 1014.55996993586 74.075 2 0.14628552595045446 0.0009750720705443446 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 119382 8910 VENSPSPLP True H1975_Epitope_Rep2 938.4709114580199 938.4703649679301 39.24 1 0.1462850096681472 0.0009750720705443446 0.9438714419765777 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'ENST00000399098.5_2_21:38444584-38445304:-|nuORF', 'ENST00000329667.7_1_21:38439639-38444836:-|nuORF', 'ENST00000430792.1_1_21:38444584-38444998:-|nuORF', 'ENST00000479152.1_1_21:38441850-38444998:-|nuORF'] 67268 9209 LTDNDPVTY True H1975_Epitope_Rep2 1036.47130538084 1036.47020993586 40.376 2 0.14627815258387106 0.0009750720705443446 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 21670 16320 ERVPINDVL True PC9_epitope_Rep3 1053.58185888933 1053.5807699358602 67.911 2 0.14627206979598417 0.0009750720705443446 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 38688 4362 HHSDGSVSL True PC9_epitope_Rep5 937.42535824793 937.42426993586 21.849 2 0.1462584884853136 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 58277 11621 LETEVPVVA True H1975_Epitope_Rep1 955.5226126777098 955.5220649679301 49.69 1 0.1462566802136943 0.0009750720705443446 0.9438714419765777 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 117143 13319 TYSPALNKM[Oxidation]F True PC9_epitope_Rep1 1186.5692459807399 1186.5681499358602 56.092 2 0.14625385910880928 0.0009750720705443446 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 83711 5458 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 26.05 2 0.1462517046363998 0.0009750720705443446 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 7861 3824 ATALPTGTSK True NCI_RA007_Epitope_Rep3 945.5131106231701 945.51200993586 21.25 2 0.14624873006117073 0.0009750720705443446 0.9438714419765777 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1'] 9706 23508 AYILDTLVF True PC9_epitope_Rep2 1053.57464825057 1053.57354993586 95.898 2 0.14624712910823479 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 44678 16245 IPLYLKGGVA True PC9_epitope_Rep5 1029.6222671493297 1029.62116993586 67.475 2 0.14624509823926765 0.0009750720705443446 0.9438714419765777 ['ENSG00000112695|ENST00000684430|COX7A2'] 70155 22202 LYLENIDEF True PC9_epitope_Rep1 1154.54955570154 1154.5484499358602 90.22 2 0.14624206477179513 0.0009750720705443446 0.9438714419765777 ['ENSG00000077514|ENST00000263681|POLD3', 'ENST00000532497.5_1_11:74303703-74322559:+|nuORF', 'ENST00000532784.5_1_11:74303703-74306426:+|nuORF', 'ENST00000527458.5_1_11:74303652-74303820:+|nuORF'] 96250 9090 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 39.915 1 0.14623951282132683 0.0009750720705443446 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 88946 5999 REDFKTAVV True H1975_Epitope_Rep3 1063.56620882519 1063.5651099358602 28.088 2 0.14623931033910403 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-4|EFCAB11', 'ENST00000555070.1_1_14:89878823-90420935:-|nuORF'] 53889 14628 KYIEGVSDF True PC9_epitope_Rep2 1056.51277627 1056.51166993586 61.534 2 0.14623537342165827 0.0009750720705443446 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 102766 4849 SQEGRPVQV True PC9_epitope_Rep5 998.5145076054997 998.51340993586 23.693 2 0.14622798889331814 0.0009750720705443446 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 10084 7834 AYVHM[Oxidation]VTHF True PC9_epitope_Rep2 1119.5171508382302 1119.51604993586 35.505 2 0.1462278531040612 0.0009750720705443446 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 138595 8745 YRQKQVVIL True PC9_epitope_Rep2 1145.6920780446499 1145.69044490379 38.996 3 0.14622729466322829 0.0009750720705443446 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 110732 10692 TKEVNSGFFY True H1975_Epitope_Rep3 1190.5607890915799 1190.56027496793 46.202 1 0.14622597721662758 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 115294 17280 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54427496793 71.929 1 0.14622586053321238 0.0009750720705443446 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 73266 6199 NEIGAIEKA True H1975_Epitope_Rep2 943.49746055903 943.49636993586 28.816 2 0.14621893955784304 0.0009750720705443446 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 112133 21680 TLVDEVFRI True PC9_epitope_Rep5 1090.60225998074 1090.60116993586 88.439 2 0.14621159522652935 0.0009750720705443446 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2', 'RPA2|p.G67W|1|0.2|ENSG00000117748|chr1:27907201-27907201|C/A|missense_variant'] 67209 9234 LTDITKGVQY True H1975_Epitope_Rep3 1136.607739284 1136.60717496793 40.51 1 0.14620683951981134 0.0009750720705443446 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 74541 12894 NLAENISRV True PC9_epitope_Rep1 1014.54580773378 1014.5447099358599 54.47 2 0.14620075057454981 0.0009750720705443446 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 9423 20843 AVVPGLLEV True PC9_epitope_Rep4 895.5378688190299 895.53676993586 88.325 2 0.14618669801901887 0.0009750720705443446 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 17256 9233 EHAQEVVL True PC9_epitope_Rep1 923.4712458111899 923.47014993586 40.367 2 0.14618619111507034 0.0009750720705443446 0.9438714419765777 ['ENSG00000080608|ENST00000397885|PUM3'] 102985 18445 SQISDTSVVL True PC9_epitope_Rep1 1047.5448046742702 1047.54427496793 75.739 1 0.14618099517504848 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 58673 16932 LFIATSQKF True PC9_epitope_Rep1 1053.58588164061 1053.58478993586 69.952 2 0.14617362128528666 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 53712 12809 KYDPNVYSI True PC9_epitope_Rep4 1097.53932537101 1097.53822993586 57.13 2 0.14615451779071845 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 4084 19707 AHSNEILIF True PC9_epitope_Rep3 1042.54474510462 1042.54364993586 81.031 2 0.14614993727960823 0.0009750720705443446 0.9438714419765777 ['ENST00000554115.5_1_14:50249154-50249313:+|nuORF', 'ENSG00000165516|ENST00000298307|KLHDC2'] 124210 7568 VLAPPQEELSK True NCI_RA007_Epitope_Rep5 1209.6605031328497 1209.6594099358601 35.795 2 0.14614913116597367 0.0009750720705443446 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000024466', 'CON__ENSEMBL:ENSBTAP00000024462'] 43622 17165 IIIPEIQKV True PC9_epitope_Rep6 1051.66413196131 1051.66302993586 78.611 2 0.14614818315726286 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 47773 12580 IYQRDPLKL True PC9_epitope_Rep3 1144.6604435631998 1144.65880490379 53.412 3 0.14614700036668699 0.0009750720705443446 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 116205 20250 TVTSDLLQV True PC9_epitope_Rep2 974.5284263341399 974.5273299358599 83.311 2 0.14614621906247727 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 56958 4854 LEDVSKPPA True H1975_Epitope_Rep2 954.5022115863 954.50110993586 23.758 2 0.14614482334471804 0.0009750720705443446 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 47415 8514 IYIKQIKTF True NCI_RA007_Epitope_Rep3 1152.6906810623198 1152.6890249037901 40.562 3 0.14613243496385356 0.0009750720705443446 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 125606 16977 VMAPRTVLL True PC9_epitope_Rep5 998.5946725024999 998.59356993586 70.32 2 0.1461321652850322 0.0009750720705443446 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 6901 7482 AQITGTEHL True PC9_epitope_Rep2 968.49270953176 968.49160993586 34.152 2 0.1461277213636505 0.0009750720705443446 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 77005 14253 NVTEYVVRV True PC9_epitope_Rep4 1077.5818588893299 1077.5807699358602 62.729 2 0.14612239896299092 0.0009750720705443446 0.9438714419765777 ['ENSG00000125651|ENST00000394456|GTF2F1', 'ENST00000595047.5_1_19:6392384-6393012:-|nuORF'] 112833 6146 TPMGPGRTV True PC9_epitope_Rep5 914.46438660894 914.46328993586 28.624 2 0.1461208832071415 0.0009750720705443446 0.9438714419765777 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 87787 16298 QVIAGFNRL True PC9_epitope_Rep3 1016.57671393924 1016.57560993586 67.827 2 0.14611952398785988 0.0009750720705443446 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 35566 14057 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.5172549679301 61.98 1 0.14611621220682058 0.0009750720705443446 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 53880 14092 KYIDQKFVL True PC9_epitope_Rep2 1152.6542955536 1152.6531899358602 59.478 2 0.14611441716337661 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 7179 17099 ARDETEFYL True PC9_epitope_Rep1 1142.5244035828598 1142.5233099358602 70.597 2 0.14611412460480852 0.0009750720705443446 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 137608 19827 YLTVAAVFR True PC9_epitope_Rep1 1038.5862159937797 1038.5851099358601 81.078 2 0.14611318844672108 0.0009750720705443446 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 80254 9577 PLDHLKPLEY True H1975_Epitope_Rep2 1223.65502382959 1223.6533649037901 41.812 3 0.1461119004862623 0.0009750720705443446 0.9438714419765777 ['ENSG00000135763|ENST00000258243|URB2'] 30190 20096 FYVGHIDAF True PC9_epitope_Rep1 1067.50763131991 1067.50652993586 82.127 2 0.14610505216181638 0.0009750720705443446 0.9438714419765777 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 13302 11188 DLYLENPEIK True H1975_Epitope_Rep1 1232.6288686514001 1232.6277699358602 48.003 2 0.14610271483108447 0.0009750720705443446 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 37866 18352 HDVLATLL True PC9_epitope_Rep4 880.5018176634801 880.50072993586 78.657 2 0.14610148969729847 0.0009750720705443446 0.9438714419765777 ['ENSG00000115524|ENST00000335508|SF3B1'] 24007 14846 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep5 1300.57578791316 1300.57468993586 62.106 2 0.14608517388284767 0.0009750720705443446 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 96238 8720 SEEPGAPLP True H1975_Epitope_Rep1 895.4287122928699 895.42760993586 38.469 2 0.14608421825220522 0.0009750720705443446 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 99524 6228 SLETENAGLR True NCI_RA007_Epitope_Rep1 1088.5462016566 1088.5451099358602 28.258 2 0.14608419542794462 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 68816 6941 LVDSNNPKI True PC9_epitope_Rep2 998.53965972418 998.53856993586 32.099 2 0.14607805012528355 0.0009750720705443446 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 21602 17731 ERSNDYFVL True PC9_epitope_Rep4 1141.54038800017 1141.53928993586 76.225 2 0.14607045179641334 0.0009750720705443446 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.R30G|1|0.06|ENSG00000133138|chrX:106802941-106802941|C/G|missense_variant'] 12607 6060 DLEAHIDSANK True PC9_epitope_Rep2 1211.57823006087 1211.57659490379 28.704 3 0.14606928821669637 0.0009750720705443446 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 7930 15677 ATDFDVLSY True H1975_Epitope_Rep2 1029.46549172441 1029.46497496793 65.462 1 0.14606741591951752 0.0009750720705443446 0.9438714419765777 ['ENST00000463347.5_1_3:45730948-45748420:+|nuORF', 'ENST00000445499.2_1_3:45730957-45754662:+|nuORF', 'ENST00000463237.5_1_3:45730948-45754703:+|nuORF', 'ENSG00000211456|ENST00000389061|SACM1L'] 132106 11712 VYINTAQEF True NCI_RA007_Epitope_Rep3 1083.5236753068698 1083.52256993586 53.181 2 0.14606600200495617 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 21847 10422 ESEDPDYYQY True H1975_Epitope_Rep1 1307.48299226335 1307.4824749679299 45.041 1 0.14605553645229047 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 75878 17887 NRDPILVSL True PC9_epitope_Rep2 1025.58694426977 1025.58584993586 74.105 2 0.1460518007434613 0.0009750720705443446 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 94925 8109 RYPDSHQLF True NCI_RA007_Epitope_Rep4 1161.55670677065 1161.55560993586 37.978 2 0.1460514007647208 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 135892 8464 YESLVHAVA True H1975_Epitope_Rep3 987.50254593947 987.50144993586 37.541 2 0.1460488370592241 0.0009750720705443446 0.9438714419765777 ['ENSG00000100372|ENST00000435456|SLC25A17', 'ENST00000434185.1_1_22:41195672-41215336:-|nuORF', 'ENST00000491545.5_1_22:41213372-41215336:-|nuORF'] 1822 11997 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 51.154 1 0.14604453269923778 0.0009750720705443446 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 43879 16533 ILDEVIMGY True H1975_Epitope_Rep3 1051.5259838059899 1051.52488993586 69.091 2 0.14603077200109604 0.0009750720705443446 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 87385 14013 QTDNIIYVY True H1975_Epitope_Rep2 1127.5498900547097 1127.54937496793 59.05 1 0.1460238868631838 0.0009750720705443446 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF', 'IFT172|p.K94N|1|0.12|ENSG00000138002|chr2:27485032-27485032|C/G|missense_variant'] 48818 5005 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 24.378 2 0.14602357519610357 0.0009750720705443446 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 102637 13263 SQDARFYAL True PC9_epitope_Rep6 1069.51925863277 1069.5181699358602 62.667 2 0.14601734147358997 0.0009750720705443446 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 118825 11536 VEEGFSIQA True H1975_Epitope_Rep1 978.4658260775799 978.46472993586 49.357 2 0.14601109391078254 0.0009750720705443446 0.9438714419765777 ['ENSG00000172409|ENST00000533682|CLP1'] 98192 13952 SIDSLQLGY True H1975_Epitope_Rep1 994.49712620586 994.4965749679301 58.822 1 0.14601089583784377 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 104116 9453 SRYDGQIAV True PC9_epitope_Rep2 1007.5036085686297 1007.50250993586 41.699 2 0.14600786486274558 0.0009750720705443446 0.9438714419765777 ['ENSG00000182179|ENST00000333486|UBA7'] 73875 11384 NHHLFTTTI True PC9_epitope_Rep2 1082.5508931142201 1082.5497899358602 49.11 2 0.14600701151104073 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 97011 5253 SEVQSTVEA True H1975_Epitope_Rep2 948.4400052525599 948.43945496793 25.272 1 0.1460066170733172 0.0009750720705443446 0.9438714419765777 ['ENST00000518940.5_1_8:103855961-103870248:-|nuORF'] 73252 7274 NEIDAEPPA True H1975_Epitope_Rep3 954.42944056886 954.4288949679301 32.954 1 0.1460040029753389 0.0009750720705443446 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 132867 9457 VYTSGVYHI True NCI_RA007_Epitope_Rep2 1037.51819600361 1037.5170899358602 41.397 2 0.14599828212838395 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 139399 8930 YTEEDAVSY True H1975_Epitope_Rep1 1075.43458551895 1075.43407496793 39.254 1 0.14599606186935424 0.0009750720705443446 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 8342 9337 ATLQYIVGR True NCI_RA007_Epitope_Rep4 1019.5763795860698 1019.57528993586 42.771 2 0.1459954444711107 0.0009750720705443446 0.9438714419765777 ['ENSG00000085377|ENST00000652536|PREP'] 104775 7243 STDPEALHY True H1975_Epitope_Rep3 1031.45598966987 1031.4548899358601 32.832 2 0.14599137708830745 0.0009750720705443446 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 53642 17524 KWNPTAGVAF True PC9_epitope_Rep2 1089.56072952193 1089.56017496793 72.669 1 0.145989425118545 0.0009750720705443446 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 129360 12078 VTEEFQPVY True H1975_Epitope_Rep1 1110.5233409536997 1110.52277496793 51.471 1 0.14598847135303938 0.0009750720705443446 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 107767 21595 TAMDVVYAL True PC9_epitope_Rep3 981.4841189940099 981.48302993586 88.36 2 0.14598841422089404 0.0009750720705443446 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 62771 11251 LM[Oxidation]DHTIPEV True PC9_epitope_Rep4 1069.51139675145 1069.51028993586 51.05 2 0.14598729922875392 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 45090 6453 IQRTPKIQVYS True H1975_Epitope_Rep3 1331.75613485319 1331.7550299358602 29.795 2 0.14598544405821032 0.0009750720705443446 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 130424 11078 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.49037496793 49.245 1 0.14598412323862825 0.0009750720705443446 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 14861 12692 DYFEQYGK True PC9_epitope_Rep2 1048.4501760134401 1048.44906993586 54.127 2 0.145981095191431 0.0009750720705443446 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 86235 16040 QPYMPTVSA True PC9_epitope_Rep3 992.4637179025999 992.4631649679301 66.847 1 0.14597278244766823 0.0009750720705443446 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 9806 11565 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 52.245 2 0.14597156436886016 0.0009750720705443446 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 69719 15755 LWDTAGQERF True PC9_epitope_Rep1 1221.5778361380496 1221.5767299358602 65.425 2 0.14596574532798468 0.0009750720705443446 0.9438714419765777 ['ENSG00000165105|ENST00000376447|RASEF', 'nc|ENSG00000175582|P20340-4|RAB6A', 'nc|ENSG00000154917|Q9NRW1-2|RAB6B', 'nc|ENSG00000175582|P20340-2|RAB6A', 'ENSG00000175582|ENST00000336083|RAB6A', 'ENSG00000154917|ENST00000285208|RAB6B', 'ENSG00000179331|ENST00000320578|RAB39A', 'ENSG00000041353|ENST00000262094|RAB27B', 'nc|ENSG00000109113|Q9BZG1-4|RAB34', 'nc|ENSG00000109113|Q9BZG1-2|RAB34', 'ENSG00000109113|ENST00000395245|RAB34', 'nc|ENSG00000069974|P51159-2|RAB27A', 'ENSG00000069974|ENST00000336787|RAB27A', 'nc|ENSG00000147127|Q5JT25-2|RAB41', 'ENSG00000147127|ENST00000374473|RAB41', 'ENSG00000172007|ENST00000305626|RAB33B'] 97863 19169 SHLDYDITL True PC9_epitope_Rep1 1075.5185899264302 1075.51748993586 78.528 2 0.14595498773579288 0.0009750720705443446 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 106472 5960 SVVGNFQEK True NCI_RA007_Epitope_Rep5 1006.5083595959 1006.50726993586 29.608 2 0.14595197875486604 0.0009750720705443446 0.9438714419765777 ['ENSG00000180061|ENST00000326652|TMEM150B'] 42633 4847 IETNHNLPP True H1975_Epitope_Rep2 1033.5192586327698 1033.5181699358602 23.732 2 0.14594287134138698 0.0009750720705443446 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 103617 13583 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.60010993586 60.141 2 0.14594021638132723 0.0009750720705443446 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 54191 11551 KYPDRVPVI True PC9_epitope_Rep2 1085.62332977849 1085.62222993586 49.757 2 0.1459400428545616 0.0009750720705443446 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 35697 10881 GTQPWFISK True NCI_RA007_Epitope_Rep4 1062.5498304850598 1062.5487299358601 48.706 2 0.1459342118218302 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'MYLK|p.K903Rfs*3|1|0.3|ENSG00000065534|chr3:123700762-123700762|C/-|frameshift_variant'] 115459 9205 TVFSHAQTV True PC9_epitope_Rep3 988.4977949121999 988.49668993586 40.342 2 0.14593399299130883 0.0009750720705443446 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 70413 23753 LYQILQGIVF True PC9_epitope_Rep5 1192.6855956818797 1192.68448993586 96.348 2 0.14592948427114788 0.0009750720705443446 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 13887 6506 DRDPASGTAL True PC9_epitope_Rep4 1001.47778774361 1001.47668993586 32.147 2 0.14592841222214586 0.0009750720705443446 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 96683 7248 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.4183249679301 32.851 1 0.14592729946392735 0.0009750720705443446 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 72629 12476 MVVQDGIVKA True PC9_epitope_Rep3 1058.57941636118 1058.57830993586 53.015 2 0.14591849823229644 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 139856 15804 YVDPQFLTY True H1975_Epitope_Rep2 1144.54407639828 1144.5429699358601 65.976 2 0.14591592566793132 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 132584 5557 VYPPIRHHL True NCI_RA007_Epitope_Rep4 1130.6348975217 1130.63326490379 27.975 3 0.1459128992032076 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000155975|Q8NEZ2-3|VPS37A', 'ENSG00000155975|ENST00000324849|VPS37A', 'nc|ENSG00000155975|Q8NEZ2-2|VPS37A'] 138825 8666 YSDKYGLGY True H1975_Epitope_Rep1 1064.48147614172 1064.4803699358602 38.263 2 0.1459128005880199 0.0009750720705443446 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 76101 20021 NRNFSNFIL True PC9_epitope_Rep5 1123.57744221523 1123.5763499358602 82.062 2 0.14590832033823256 0.0009750720705443446 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 3900 11380 AHDDSVM[Oxidation]YL True PC9_epitope_Rep5 1065.44371111445 1065.4426099358602 48.77 2 0.14590598844845856 0.0009750720705443446 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 96574 10458 SELPVSEVA True H1975_Epitope_Rep3 929.47057710485 929.47002496793 45.289 1 0.14590525122847356 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 21763 11204 ESDEVELSY True H1975_Epitope_Rep1 1069.44515020265 1069.4440499358602 48.065 2 0.14590204542960192 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 100815 16060 SLRTLTNETF True PC9_epitope_Rep5 1180.60880191316 1180.6077099358602 66.764 2 0.14589568011560317 0.0009750720705443446 0.9438714419765777 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 114373 6705 TSDHFETIM[Oxidation]KY True H1975_Epitope_Rep1 1386.6125673447 1386.6109349037902 30.837 3 0.14588725593270618 0.0009750720705443446 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 383 5091 AALEDKNSL True NCI_RA007_Epitope_Rep3 959.49237517859 959.49126993586 27.017 2 0.14588497526884966 0.0009750720705443446 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA1-ALDH3B1|1|fusion'] 74887 11031 NLQTVNVDEN True PC9_epitope_Rep1 1144.53603089572 1144.5349299358602 47.319 2 0.1458822442944657 0.0009750720705443446 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 103735 13387 SREPSQVIF True PC9_epitope_Rep5 1061.5505587610498 1061.54946993586 56.509 2 0.1458758727895518 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 31329 10029 GEAIDVYQA True H1975_Epitope_Rep2 964.45017601344 964.44962496793 43.569 1 0.14587552091857275 0.0009750720705443446 0.9438714419765777 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-2|CDK5RAP3'] 108916 7416 TESSWHEIA True H1975_Epitope_Rep2 1058.4668887067398 1058.4657899358601 33.468 2 0.1458699701620663 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 3497 14861 AGLQFPVGR True PC9_epitope_Rep1 943.5239500903898 943.52284993586 61.982 2 0.14586442683754872 0.0009750720705443446 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 97677 5656 SHDHGYTTL True PC9_epitope_Rep1 1029.45157299577 1029.4504699358602 26.579 2 0.14586389502166092 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000099956|Q12824-2|SMARCB1'] 29793 12313 FVTFDDHD True PC9_epitope_Rep2 994.40322582102 994.40212993586 52.675 2 0.14585795779537036 0.0009750720705443446 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 66598 7158 LSSPATLNSR True PC9_epitope_Rep5 1044.5563724174801 1044.55526993586 32.503 2 0.14585603770619818 0.0009750720705443446 0.9438714419765777 ['CON__P00761'] 23421 6048 EVVQNFAK True NCI_RA007_Epitope_Rep2 933.4919812557698 933.49088993586 28.13 2 0.14585435717865045 0.0009750720705443446 0.9438714419765777 ['ENSG00000103187|ENST00000262428|COTL1'] 132518 20785 VYPEYVIQY True PC9_epitope_Rep3 1172.57537652656 1172.57426993586 85.221 2 0.14585307705167194 0.0009750720705443446 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 22409 16302 ETEYSFLDY True H1975_Epitope_Rep2 1165.4815357113698 1165.48097496793 67.924 1 0.14585284568664547 0.0009750720705443446 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 116673 23459 TYIQILESF True PC9_epitope_Rep5 1112.57537652656 1112.57426993586 95.219 2 0.14584584857715915 0.0009750720705443446 0.9438714419765777 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM'] 116615 21555 TYGPSFPAF True PC9_epitope_Rep5 985.4545331178899 985.4539849679301 87.949 1 0.14583992672502608 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'RALGAPB|p.V262F|1|0.49|ENSG00000170471|chr20:38509120-38509120|G/T|missense_variant'] 31901 12796 GEQLTLPPPP True H1975_Epitope_Rep2 1047.5600608155898 1047.5589699358602 54.326 2 0.14583526235611344 0.0009750720705443446 0.9438714419765777 ['ENSG00000196313|ENST00000434423|POM121', 'nc|ENSG00000205578|A6NF01|POM121B', 'nc|ENSG00000196313|Q96HA1-2|POM121', 'ENSG00000272391|ENST00000615331|POM121C', 'nc|ENSG00000196313|Q96HA1-3|POM121', 'nc|ENSG00000272391|A8CG34|POM121C'] 8969 12622 AVHDSFVAV True PC9_epitope_Rep1 943.4763311916299 943.4752299358599 53.421 2 0.14583281093684244 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 73725 7431 NGVLEGIR True H1975_Epitope_Rep3 856.4766655448 856.47556993586 33.562 2 0.14583082496297006 0.0009750720705443446 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11', 'MYH8|p.K1812Rfs*39|1|0.41|ENSG00000133020|chr17:10392861-10392861|C/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2', 'MYH2|p.A1133Pfs*37|1|0.47|ENSG00000125414|chr17:10529037-10529037|C/-|frameshift_variant', 'ENSG00000006788|ENST00000252172|MYH13', 'ENSG00000092054|ENST00000355349|MYH7', 'ENSG00000197616|ENST00000405093|MYH6', 'ENSG00000264424|ENST00000255381|MYH4', 'MYH1|p.N889Mfs*24|1|0.13|ENSG00000109061|chr17:10504835-10504835|T/-|frameshift_variant', 'ENSG00000078814|ENST00000262873|MYH7B', 'nc|ENSG00000078814|A7E2Y1|MYH7B', 'ENSG00000109063|ENST00000583535|MYH3'] 23944 11475 EYNSDLHQF True PC9_epitope_Rep2 1151.4883524273098 1151.48724993586 49.455 2 0.14583017271019888 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 117066 8737 TYQSITERI True NCI_RA007_Epitope_Rep4 1109.57168812845 1109.5705899358602 40.401 2 0.14582660572371053 0.0009750720705443446 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.E327Gfs*21|1|0.11|ENSG00000131558|chr7:133356539-133356540|-/G|frameshift_variant'] 86324 19042 QQHSILLLL True PC9_epitope_Rep6 1063.6389798426299 1063.6378899358601 85.889 2 0.1458247570801674 0.0009750720705443446 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 14638 10045 DVNAAIAAIK True H1975_Epitope_Rep1 984.5603951687599 984.55928993586 43.577 2 0.14582167221759365 0.0009750720705443446 0.9438714419765777 ['ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A'] 34673 9510 GQLDTPGVHNV True PC9_epitope_Rep2 1135.56218607391 1135.56108993586 41.929 2 0.14581681186997933 0.0009750720705443446 0.9438714419765777 ['ENSG00000197771|ENST00000369077|MCMBP', 'nc|ENSG00000197771|Q9BTE3|MCMBP', 'nc|ENSG00000197771|Q9BTE3-3|MCMBP'] 67824 21938 LTIEDGIFEV True PC9_epitope_Rep4 1134.58085582982 1134.5802749679299 92.595 1 0.145813496366539 0.0009750720705443446 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 63641 20151 LPNLQTVTV True PC9_epitope_Rep3 983.56514619603 983.56404993586 82.766 2 0.14580979453290047 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 52671 14464 KQFGNILIL True NCI_RA007_Epitope_Rep4 1044.6331661861998 1044.63206993586 62.989 2 0.14580714996036548 0.0009750720705443446 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'SMS|p.G166W|1|0.32|ENSG00000102172|chrX:21977227-21977227|G/T|missense_variant', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 8802 20140 AVFPDDM[Oxidation]PTL True PC9_epitope_Rep5 1120.51106239828 1120.50996993586 82.516 2 0.14579283635348245 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 105157 7067 STMGYMMAK True NCI_RA007_Epitope_Rep3 1018.4285953471799 1018.42748993586 34.914 2 0.14578884895253374 0.0009750720705443446 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 26380 18194 FIINGIEKV True PC9_epitope_Rep2 1031.60153170475 1031.6004299358601 75.29 2 0.1457886808652522 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B'] 132792 17818 VYSQIPAAVKL True PC9_epitope_Rep3 1187.6914093383098 1187.6903099358601 73.735 2 0.145781038603611 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 28780 13928 FTDEEVDELY True H1975_Epitope_Rep3 1258.52412879934 1258.5230299358602 58.887 2 0.14578042320421983 0.0009750720705443446 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 6310 6271 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 29.518 2 0.14577546714239262 0.0009750720705443446 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 54372 17740 KYQIINEEF True PC9_epitope_Rep1 1182.5920892198599 1182.59098993586 73.035 2 0.14577157466159987 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 99267 22053 SLDDLLTNV True PC9_epitope_Rep2 988.5076908895601 988.50714496793 90.3 1 0.14576834458887555 0.0009750720705443446 0.9438714419765777 ['ENSG00000143819|ENST00000272167|EPHX1'] 114242 14535 TRYIAPTVL True PC9_epitope_Rep2 1032.5967806774797 1032.59568993586 61.18 2 0.1457656833908232 0.0009750720705443446 0.9438714419765777 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000472059.5_1_17:19558694-19578882:+|nuORF', 'ENST00000476965.5_1_17:19559657-19578882:+|nuORF'] 47851 18899 IYTFPHSAF True PC9_epitope_Rep2 1081.5232813840498 1081.52218993586 78.059 2 0.14576363879677384 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 108446 12209 TEELAYLK True PC9_epitope_Rep3 965.50696261357 965.50586993586 51.993 2 0.1457621287335571 0.0009750720705443446 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 107917 19856 TAVPSLFSV True PC9_epitope_Rep6 919.50148331031 919.50038993586 89.035 2 0.14576145007369037 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1'] 27458 12944 FNPFVTSDR True PC9_epitope_Rep6 1081.51925863277 1081.5181699358602 61.335 2 0.14575886393889165 0.0009750720705443446 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 127515 23045 VQVEDIVFL True PC9_epitope_Rep1 1060.580461907 1060.57936993586 93.442 2 0.1457502646973025 0.0009750720705443446 0.9438714419765777 ['ENSG00000197780|ENST00000338366|TAF13'] 96668 10610 SENPSVYVP True NCI_RA007_Epitope_Rep5 990.4658260775799 990.4652749679301 47.449 1 0.1457467686934329 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 61259 15060 LLDSDEPLVY True H1975_Epitope_Rep1 1162.57577044938 1162.57517496793 63.179 1 0.14573438628691032 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 46828 5538 IVEFASKPAAR True NCI_RA007_Epitope_Rep1 1187.6662572196299 1187.6646149037902 25.612 3 0.1457298208608458 0.0009750720705443446 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 90411 19378 RIPAYFVTV True PC9_epitope_Rep2 1064.60186605792 1064.6007699358602 79.915 2 0.14572416131925647 0.0009750720705443446 0.9438714419765777 ['ENSG00000204394|ENST00000375663|VARS1', 'ENST00000461874.1_1_6:31749609-31749932:-|nuORF', 'ENST00000483275.1_1_6:31749724-31750195:-|nuORF'] 31557 10267 GEFQSFSSA True NCI_RA007_Epitope_Rep5 958.4032258210199 958.40267496793 46.122 1 0.1457200790945178 0.0009750720705443446 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 53193 9571 KTAAEDAIRNL True PC9_epitope_Rep4 1200.6462500510397 1200.64459490379 44.434 3 0.145719947123791 0.0009750720705443446 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000173933|Q9BWF3-3|RBM4', 'nc|ENSG00000173933|Q9BWF3-4|RBM4', 'nc|ENSG00000173933|Q9BWF3-2|RBM4', 'ENSG00000173914|ENST00000310046|RBM4B'] 72360 9201 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46340993586 40.345 2 0.1457189799252218 0.0009750720705443446 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 108814 9516 TEQPPSPLP True H1975_Epitope_Rep1 964.48656152216 964.48546993586 41.526 2 0.1457112974799004 0.0009750720705443446 0.9438714419765777 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 135828 7344 YEQGPDTPVSA True H1975_Epitope_Rep1 1162.51423282198 1162.5131299358602 33.258 2 0.1457092721401466 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 132782 21268 VYSQFITQL True PC9_epitope_Rep5 1097.5757108797297 1097.57517496793 86.858 1 0.14570729089079287 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 34506 6935 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 33.906 2 0.14570576327394086 0.0009750720705443446 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 117240 15188 TYVYFTNEL True NCI_RA007_Epitope_Rep3 1148.5389910178399 1148.5378899358602 67.263 2 0.14569248209699776 0.0009750720705443446 0.9438714419765777 ['ENSG00000121858|ENST00000241261|TNFSF10', 'nc|ENSG00000121858|P50591-2|TNFSF10', 'ENST00000472804.1_1_3:172229350-172241222:-|nuORF', 'ENST00000494851.5_1_3:172226989-172241222:-|nuORF', 'ENST00000466777.1_1_3:172236192-172241222:-|nuORF'] 69275 14897 LVPEFVHNV True PC9_epitope_Rep6 1052.5654805492 1052.5643899358602 69.292 2 0.1456896059208933 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.M758Sfs*26|1|0.14|ENSG00000170921|chr17:63355299-63355303|GACAT/-|frameshift_variant'] 76215 8898 NRYDGIYKV True PC9_epitope_Rep2 1126.5771078620598 1126.5754649037901 39.582 3 0.14568835680771597 0.0009750720705443446 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 95454 20528 SALPFITYL True H1975_Epitope_Rep2 1023.5640835668698 1023.56298993586 85.049 2 0.14567840737515572 0.0009750720705443446 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 77388 19609 NYLSIFRKF True PC9_epitope_Rep2 1186.6498788795 1186.6482449037899 80.81 3 0.14567428980165814 0.0009750720705443446 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 60474 14997 LILSPTREL True PC9_epitope_Rep4 1040.62299542532 1040.62188993586 65.625 2 0.14567129793197053 0.0009750720705443446 0.9438714419765777 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENSG00000088205|ENST00000263239|DDX18'] 9005 16418 AVIDVGINRV True PC9_epitope_Rep1 1054.61349337078 1054.6123899358602 67.976 2 0.14567061472007148 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 76640 15523 NTIDRLIQA True PC9_epitope_Rep1 1042.57710786206 1042.5760099358602 64.532 2 0.1456655423865768 0.0009750720705443446 0.9438714419765777 ['ENST00000371727.5_1_1:51938565-51946964:-|nuORF'] 93909 14357 RVIGTLEEV True PC9_epitope_Rep5 1014.57095985246 1014.56986993586 60.226 2 0.14566488411285605 0.0009750720705443446 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 127551 20068 VQVPVPVTV True PC9_epitope_Rep5 936.5644179200399 936.56386496793 82.244 1 0.1456612945413917 0.0009750720705443446 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 6099 10205 APM[Oxidation]PPIIHA True PC9_epitope_Rep4 961.50552352537 961.50442993586 46.931 2 0.14565830099017985 0.0009750720705443446 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 57445 9037 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 39.714 2 0.14565653575764936 0.0009750720705443446 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 84293 15155 QEYVTFLGA True H1975_Epitope_Rep1 1026.5022115862998 1026.5016749679298 63.553 1 0.14565395891775718 0.0009750720705443446 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 105624 7277 SVFDSSSDMEK True NCI_RA007_Epitope_Rep3 1230.50743318938 1230.50632993586 35.733 2 0.14564974209656026 0.0009750720705443446 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 9943 20343 AYQSIQNYL True PC9_epitope_Rep5 1098.53457434374 1098.53346993586 83.284 2 0.14564840902183085 0.0009750720705443446 0.9438714419765777 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 39776 13603 HQDLSTPVL True PC9_epitope_Rep1 1008.52400966004 1008.52290993586 57.18 2 0.1456483297785833 0.0009750720705443446 0.9438714419765777 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 112796 18422 TPLPVTGLSSA True PC9_epitope_Rep2 1041.5706254992901 1041.5695299358601 76.19 2 0.14563174259251022 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 57738 7748 LENMPSAEA True H1975_Epitope_Rep2 960.4222470134399 960.4216949679301 34.756 1 0.14562841229409293 0.0009750720705443446 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 23797 14110 EYLDDRNTF True PC9_epitope_Rep5 1171.51456717515 1171.51346993586 59.284 2 0.14562578499103615 0.0009750720705443446 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.H214R|4|0.56|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant', 'TP53|p.R213G|1|0.52|ENSG00000141510|chr17:7674894-7674894|G/C|missense_variant', 'TP53|p.R213L|1|0.15|ENSG00000141510|chr17:7674893-7674893|C/A|missense_variant'] 138579 19365 YRPPELLL True PC9_epitope_Rep2 999.5753169569099 999.57420993586 79.864 2 0.14562440897053994 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 4314 9822 AILLPQPPK True NCI_RA007_Epitope_Rep5 975.61170246563 975.61060993586 44.426 2 0.14562370843406786 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000132256|Q9C035-4|TRIM5', 'ENST00000437681.1_1_1:28835797-28835884:+|nuORF', 'AluY_dup64372|chr11:882046-882337:+|1.6767132008831576|0.3489879065155246|2.26|501.0|12|1|anti-sense', 'AluSx1_dup39678|chr6:158168952-158169236:+|1.0979164187189252|0.0024502072239592|8.81|331.0|15|3|anti-sense', 'chr7:5602838-5603257|261|10.47|0.37|4.81|+|0|TE_info:AluJo,AluJo_dup27100,Alu,SINE,donor,-,5602691,5602838|None,FSCN1|1', 'ENST00000483835.5_1_11:5685320-5686489:-|nuORF', 'ENST00000608290.1_1_22:46409584-46410459:+|nuORF', 'ENST00000567741.1_1_1:25644693-25663698:-|nuORF', 'ENST00000591166.1_1_17:42259005-42263988:-|nuORF', 'ENST00000585457.5_1_17:42259005-42264009:-|nuORF', 'nc|ENSG00000204370|O14521-4|SDHD', 'nc|ENSG00000137090|Q9Y5R6-3|DMRT1', 'ENST00000496007.5_1_1:1324344-1326370:-|nuORF', 'ENST00000452360.6_1_4:942397-950358:+|nuORF'] 54197 17151 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 70.847 2 0.1456232041462029 0.0009750720705443446 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 73733 11999 NHADIVSCV True PC9_epitope_Rep5 956.43856578392 956.43746993586 51.149 2 0.14562223729704715 0.0009750720705443446 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'ENST00000521049.5_1_8:71510241-71520545:-|nuORF', 'ENSG00000174599|ENST00000310754|TRAM1L1'] 139015 16625 YSHDGAFLAV True PC9_epitope_Rep3 1078.5083595959 1078.5072699358602 69.084 2 0.14562112878023864 0.0009750720705443446 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 14869 11378 DYFEQYGK True PC9_epitope_Rep6 1048.4501760134401 1048.44906993586 54.813 2 0.14561858859431434 0.0009750720705443446 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 138360 13077 YRDENLVTI True PC9_epitope_Rep6 1121.57168812845 1121.5705899358602 61.907 2 0.14561780123916668 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5', 'ENST00000502747.1_1_5:79454657-79462329:-|nuORF'] 17395 14213 EHFNGVAEL True PC9_epitope_Rep3 1014.4770594676198 1014.47596993586 59.757 2 0.14561043945331925 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5A|p.E251Q|1|0.1|ENSG00000066027|chr1:212347393-212347393|G/C|missense_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E'] 23725 22479 EYINFLENL True PC9_epitope_Rep4 1153.5655401188499 1153.56444993586 94.696 2 0.14560249311548296 0.0009750720705443446 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 37462 19308 GYADIVQLL True NCI_RA007_Epitope_Rep5 990.5385970950199 990.5380449679301 81.145 1 0.1455883924301905 0.0009750720705443446 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 82137 10797 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.47107496793 46.559 1 0.1455873700971772 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 104715 10294 STDGKHWWEY True H1975_Epitope_Rep2 1307.5571006934701 1307.55544490379 44.601 3 0.14558214283657486 0.0009750720705443446 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1', 'RAB3GAP1-CCNT2|2|fusion', 'nc|ENSG00000082258|O60583-2|CCNT2'] 1769 9267 AEHGLLLTA True H1975_Epitope_Rep3 923.50763131991 923.50652993586 40.637 2 0.14557380680129733 0.0009750720705443446 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1'] 105308 8454 STTQVVGILK True NCI_RA007_Epitope_Rep5 1044.6179100448799 1044.6168099358601 39.2 2 0.14556847629753863 0.0009750720705443446 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 60648 8612 LITPAVVSER True H1975_Epitope_Rep1 1083.62880908175 1083.6277099358601 38.053 2 0.1455682630797926 0.0009750720705443446 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 9615 23135 AYFDVPELI True PC9_epitope_Rep3 1065.5382627418498 1065.5371699358602 94.256 2 0.14555646501928407 0.0009750720705443446 0.9438714419765777 ['CLIP4|p.A344Hfs*6|1|0.23|ENSG00000115295|chr2:29152693-29152693|G/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 18046 12710 EIIRQLNGV True PC9_epitope_Rep2 1040.59784330664 1040.59674993586 54.195 2 0.14555556899356814 0.0009750720705443446 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 136500 11432 YHISPSSSSL True PC9_epitope_Rep5 1076.5138388991602 1076.51274993586 48.971 2 0.1455514692669878 0.0009750720705443446 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 103346 18945 SQVEIKLSL True PC9_epitope_Rep5 1015.5913609438699 1015.59026993586 77.895 2 0.1455444061694182 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q1211H|1|0.08|ENSG00000177731|chr17:18245396-18245396|C/G|missense_variant'] 137867 13188 YPITLFVEK True H1975_Epitope_Rep1 1108.61684741572 1108.61574993586 55.823 2 0.14554190377705645 0.0009750720705443446 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'nc|ENSG00000205955|Q58FG0|HSP90AA5P'] 2061 10249 AELGEAPVP True H1975_Epitope_Rep2 881.4494477374499 881.4488949679301 44.428 1 0.14554106544435172 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 94768 18260 RYLPKGFLNQF True PC9_epitope_Rep4 1381.7506555499297 1381.7495499358602 78.308 2 0.1455398605868722 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 105061 6150 STITGVMDK True NCI_RA007_Epitope_Rep5 950.4742825863 950.47318993586 30.335 2 0.14553488032513745 0.0009750720705443446 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 92196 5471 RQGNMTAAL True NCI_RA007_Epitope_Rep5 960.4810993022398 960.48000993586 27.73 2 0.14553476068627566 0.0009750720705443446 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5'] 46617 19453 ITTDVLYTI True PC9_epitope_Rep6 1037.5644774896898 1037.5633899358602 87.489 2 0.1455344344176809 0.0009750720705443446 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 53359 10999 KTTTIAVEV True PC9_epitope_Rep5 960.5491617787198 960.54806993586 47.296 2 0.14552374066690352 0.0009750720705443446 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 99962 22723 SLINVGLISV True PC9_epitope_Rep2 1013.6120963884499 1013.61098993586 92.9 2 0.145518973300011 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 17785 15053 EHVPGADIL True PC9_epitope_Rep5 949.4868958753299 949.48578993586 62.907 2 0.1455187755751293 0.0009750720705443446 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 72403 13901 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep3 1136.5423625265598 1136.54126993586 58.782 2 0.14550679943983427 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 8448 7224 ATSPALFNR True NCI_RA007_Epitope_Rep5 975.51377932951 975.51268993586 34.465 2 0.1454988422349641 0.0009750720705443446 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 76110 4960 NRPGTVSSL True PC9_epitope_Rep4 929.49304388493 929.49194993586 25.683 2 0.145494675857167 0.0009750720705443446 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 18763 10901 ELDPQSSNLY True H1975_Epitope_Rep3 1164.52988288612 1164.52878993586 47.016 2 0.1454945210253168 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000153029|Q95460-2|MR1', 'ENSG00000153029|ENST00000367580|MR1'] 84633 11369 QHDPYITSI True PC9_epitope_Rep6 1072.5189242796 1072.5178299358602 54.777 2 0.14549423285841975 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 76781 15542 NVDFDAPLGY True H1975_Epitope_Rep2 1109.5029398622898 1109.5023749679299 64.937 1 0.14549145904032926 0.0009750720705443446 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 14989 19803 DYTIGFGKF True PC9_epitope_Rep4 1046.50729696674 1046.5061899358602 84.299 2 0.14549090673609835 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 11714 16799 DHFNAMTSL True PC9_epitope_Rep3 1034.4491304676199 1034.4480299358602 69.765 2 0.14548995060861786 0.0009750720705443446 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 102046 8405 SPPPPPPPP True PC9_epitope_Rep1 881.4647038787699 881.46360993586 37.166 2 0.1454811973221273 0.0009750720705443446 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 132740 19452 VYSIVPQSW True PC9_epitope_Rep6 1077.54949613189 1077.54897496793 87.485 1 0.14546175233443945 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 54110 11362 KYMEDYHQF True PC9_epitope_Rep1 1259.52810906431 1259.5264649037902 48.584 3 0.14545999460022752 0.0010153143243929266 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 13936 20446 DRFSDIYAL True PC9_epitope_Rep5 1098.53457434374 1098.53346993586 83.682 2 0.1454459767395297 0.0010153143243929266 0.9438714419765777 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 72632 12232 MVVQDGIVKA True PC9_epitope_Rep5 1058.57941636118 1058.57830993586 52.036 2 0.14543677632803012 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 89181 4915 REIEATNAV True H1975_Epitope_Rep2 1001.5141732523299 1001.51306993586 23.988 2 0.14543270828654192 0.0010153143243929266 0.9438714419765777 ['ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'ENST00000477523.1_1_2:110602660-110613470:+|nuORF'] 103729 12428 SREPSQVIF True PC9_epitope_Rep2 1061.5505587610498 1061.54946993586 53.112 2 0.14541885717254996 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 71358 21153 MHYPTALLF True PC9_epitope_Rep1 1091.54738795691 1091.5462899358602 86.197 2 0.14541863085809406 0.0010153143243929266 0.9438714419765777 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 32095 8688 GEYGFQNA True H1975_Epitope_Rep3 884.36644638948 884.3658949679301 38.417 1 0.14541643088017106 0.0010153143243929266 0.9438714419765777 ['CON__P02769'] 106362 4922 SVSNVVITK True NCI_RA007_Epitope_Rep3 945.54949613189 945.54838993586 26.353 2 0.14540111632662658 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 41810 7919 IDSDISGTLK True NCI_RA007_Epitope_Rep1 1047.5448046742702 1047.54370993586 34.797 2 0.14539838859324553 0.0010153143243929266 0.9438714419765777 ['CNPY2|p.R124Q|1|0.15|ENSG00000257727|chr12:56311248-56311248|C/T|missense_variant', 'ENSG00000257727|ENST00000273308|CNPY2'] 8855 13938 AVFPSIVGRPR True PC9_epitope_Rep1 1197.69822605425 1197.6965849037902 58.448 3 0.1453982775243978 0.0010153143243929266 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 114282 8905 TSALPIIQK True NCI_RA007_Epitope_Rep2 969.58588164061 969.5853349679301 39.265 1 0.1453973543562167 0.0010153143243929266 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 119670 12959 VESPVWVSA True H1975_Epitope_Rep2 972.4916469025999 972.49054993586 54.963 2 0.1453914689690639 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC', 'nc|ENSG00000054983|P54803-4|GALC', 'ENST00000557520.1_1_14:88425979-88431954:-|nuORF', 'nc|ENSG00000054983|P54803-5|GALC'] 9616 22274 AYFDVPELI True PC9_epitope_Rep4 1065.5382627418498 1065.5371699358602 93.916 2 0.14539128737231385 0.0010153143243929266 0.9438714419765777 ['CLIP4|p.A344Hfs*6|1|0.23|ENSG00000115295|chr2:29152693-29152693|G/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 138220 16263 YQTEIGQTL True PC9_epitope_Rep1 1051.51858992643 1051.51748993586 67.374 2 0.145375972600953 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 7074 17455 AQWDIGIAHA True PC9_epitope_Rep2 1080.53524305008 1080.5341499358601 72.392 2 0.14536915143122037 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'WHSC1L1-DDHD2|2|fusion', 'nc|ENSG00000147548|Q9BZ95-2|NSD3', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion', 'WHSC1L1-C15orf55|1|fusion', 'WHSC1L1-DDHD2|1|fusion'] 86702 7275 QRIDSDDAL True PC9_epitope_Rep2 1031.4883524273098 1031.48724993586 33.371 2 0.1453644215563295 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 138054 20739 YQDPVTLQL True PC9_epitope_Rep2 1075.55497543515 1075.55447496793 85.212 1 0.14536405190475504 0.0010153143243929266 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 8545 5133 ATYSVGMQK True NCI_RA007_Epitope_Rep4 983.4746169394699 983.47350993586 26.262 2 0.14535049963223243 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'nc|ENSG00000258628|A8MT19|RHPN2P1', 'ENST00000592247.1_1_19:33470904-33481620:-|nuORF'] 91816 7615 RPNDIM[Oxidation]AEV True PC9_epitope_Rep2 1059.50189469691 1059.5007899358602 34.664 2 0.14534806925298774 0.0010153143243929266 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 8813 19957 AVFPHLTVV True PC9_epitope_Rep1 981.5647522732099 981.56364993586 81.587 2 0.14534055348649272 0.0010153143243929266 0.9438714419765777 ['ENSG00000134825|ENST00000537328|TMEM258'] 27630 21182 FQAEIAQLM True PC9_epitope_Rep2 1049.52156713189 1049.52097496793 86.932 1 0.14533669444714709 0.0010153143243929266 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 76750 20237 NTTDIFQTV True PC9_epitope_Rep5 1037.50293986229 1037.50184993586 82.89 2 0.14533520173058037 0.0010153143243929266 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 93908 12383 RVIGTLEEV True PC9_epitope_Rep4 1014.57095985246 1014.56986993586 55.436 2 0.14532836504883317 0.0010153143243929266 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 13182 11561 DLTDYLM[Oxidation]K True H1975_Epitope_Rep3 1013.47394861357 1013.47284993586 49.598 2 0.14532587289296653 0.0010153143243929266 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 8584 19951 AVAELNYGL True PC9_epitope_Rep1 948.4916469026 948.49054993586 81.564 2 0.1453179558781136 0.0010153143243929266 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 94974 18270 RYPTSIASLAF True PC9_epitope_Rep6 1224.65027280232 1224.64916993586 82.915 2 0.14531612368601787 0.0010153143243929266 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 106738 19642 SYDPDFNQL True PC9_epitope_Rep5 1097.46655435357 1097.46597496793 80.608 1 0.14530453064811125 0.0010153143243929266 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 53240 14971 KTETEPVFWYY True H1975_Epitope_Rep2 1461.6816325002499 1461.68052993586 62.738 2 0.14529935199842153 0.0010153143243929266 0.9438714419765777 ['ENST00000564111.5_1_16:12070663-12146080:+|nuORF', 'nc|ENSG00000048471|Q8TEQ0-2|SNX29', 'ENSG00000048471|ENST00000566228|SNX29'] 73477 10801 NEVTDYAIA True H1975_Epitope_Rep2 994.46074069714 994.4596499358599 46.575 2 0.14529161077726216 0.0010153143243929266 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 88520 12339 RADGNFLLY True H1975_Epitope_Rep1 1067.53999407735 1067.5388899358602 52.492 2 0.1452912625823184 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 74155 15949 NHYNNIMAL True PC9_epitope_Rep5 1088.50731405008 1088.5062099358602 66.337 2 0.1452893470708124 0.0010153143243929266 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 79466 5959 PGPPPPPPP True NCI_RA007_Epitope_Rep3 851.45413919507 851.45304993586 30.42 2 0.14528833709095698 0.0010153143243929266 0.9438714419765777 ['ENST00000375142.5_2_1:19811931-19811970:-|nuORF', 'ENST00000584336.1_1_17:37686825-37687566:+|nuORF', 'ENSG00000136928|ENST00000259455|GABBR2', 'ENSG00000125966|ENST00000246186|MMP24', 'ENSG00000099822|ENST00000251287|HCN2', 'HCN2|p.R345Pfs*12|1|0.19|ENSG00000099822|chr19:603945-603945|G/-|frameshift_variant', 'HCN2|p.Y504Mfs*54|1|0.23|ENSG00000099822|chr19:610331-610331|T/-|frameshift_variant', 'nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'ENSG00000134775|ENST00000590592|FHOD3', 'FHOD3|p.M1132Rfs*19|1|0.5|ENSG00000134775|chr18:36744120-36744139|CCATGGTGGTAGAAAACTTC/-|frameshift_variant', 'ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENSG00000164916|ENST00000328914|FOXK1', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12'] 34510 8110 GQDVGRYQV True PC9_epitope_Rep5 1020.49885754136 1020.49776993586 36.134 2 0.14528808409825392 0.0010153143243929266 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 120291 14372 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 67.179 2 0.1452814579525175 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 131882 11162 VYDTNPAKF True PC9_epitope_Rep5 1053.51311062317 1053.51200993586 47.921 2 0.14528033850928945 0.0010153143243929266 0.9438714419765777 ['ENSG00000139433|ENST00000318348|GLTP'] 109637 13528 THDITTISI True PC9_epitope_Rep6 999.52367530687 999.52256993586 63.764 2 0.14527738686800143 0.0010153143243929266 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 67823 21936 LTIEDGIFEV True PC9_epitope_Rep4 1134.58085582982 1134.57974993586 92.587 2 0.1452750619492402 0.0010153143243929266 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 132146 9016 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5281849037901 40.03 3 0.14527409004101366 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 76041 17881 NRLEEPGNFVL True PC9_epitope_Rep4 1286.6619001151798 1286.66080993586 76.819 2 0.14527070358358163 0.0010153143243929266 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 107115 18446 SYMGHFDLL True PC9_epitope_Rep6 1081.49026700361 1081.4891699358602 83.596 2 0.14526150226239243 0.0010153143243929266 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 26142 12633 FHLSSQSSL True PC9_epitope_Rep5 1004.49270953176 1004.49160993586 53.595 2 0.14525819158487382 0.0010153143243929266 0.9438714419765777 ['SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion', 'nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 21276 17444 ERINNINIL True PC9_epitope_Rep3 1097.61930702721 1097.61820993586 72.273 2 0.14525671622321246 0.0010153143243929266 0.9438714419765777 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 105849 20385 SVITQVFHV True PC9_epitope_Rep5 1028.5654805492 1028.5643899358602 83.446 2 0.14525445132805204 0.0010153143243929266 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 139639 15193 YTSDYFISY True H1975_Epitope_Rep2 1157.49170647225 1157.4906099358602 63.596 2 0.14525059706456475 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 40142 3764 HRDTTVQTL True PC9_epitope_Rep4 1069.5516213902101 1069.5505299358601 20.629 2 0.145246427585811 0.0010153143243929266 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 35137 7561 GRYAGEESL True PC9_epitope_Rep5 980.4563240230399 980.45522993586 34.032 2 0.1452437521471225 0.0010153143243929266 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 88849 7774 REAEEPVFAA True H1975_Epitope_Rep1 1117.54038800017 1117.53928993586 34.857 2 0.14524272052854162 0.0010153143243929266 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 34963 17323 GQWYGPNTV True PC9_epitope_Rep5 1020.4664947839199 1020.46538993586 71.632 2 0.14523906353545743 0.0010153143243929266 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 84681 11319 QHFDSVM[Oxidation]QL True PC9_epitope_Rep2 1119.5018946969099 1119.5007899358602 48.861 2 0.14523888713816954 0.0010153143243929266 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 129435 12321 VTEKDLLLY True H1975_Epitope_Rep2 1092.60667665484 1092.60617496793 52.478 1 0.14522926308154224 0.0010268205528401856 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 84597 17865 QHDPETSVLVL True PC9_epitope_Rep5 1236.635016661 1236.6339099358602 73.737 2 0.1452271854497154 0.0010268205528401856 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 6669 7861 AQAPDLQRV True PC9_epitope_Rep2 996.5352430500799 996.53414993586 35.605 2 0.14522579011280842 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 21119 12329 ERDPSPWAV True PC9_epitope_Rep6 1055.50360856863 1055.5025099358602 58.822 2 0.14522212713754112 0.0010268205528401856 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 28913 12370 FTEEQAVLY True H1975_Epitope_Rep3 1098.5233409536997 1098.52277496793 52.767 1 0.14521302813273218 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 90694 8572 RKLVAEVSL True NCI_RA007_Epitope_Rep2 1013.6233297784898 1013.62222993586 37.988 2 0.1452104181443147 0.0010268205528401856 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 104455 5287 SSLNLRET True NCI_RA007_Epitope_Rep5 918.47705946762 918.47596993586 27.032 2 0.14520776303016608 0.0010268205528401856 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'VIM|p.D429Y|1|0.25|ENSG00000026025|chr10:17236305-17236305|G/T|missense_variant'] 108824 6663 TEQPVTPEP True H1975_Epitope_Rep2 996.47639076128 996.47528993586 30.537 2 0.14520624575050625 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1'] 96057 4192 SEAPPTNQATA True H1975_Epitope_Rep2 1085.49891711101 1085.4978299358602 21.232 2 0.14520494470541737 0.0010268205528401856 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 139364 9326 YTDTYTEAY True H1975_Epitope_Rep3 1125.4502355830898 1125.44967496793 40.869 1 0.14520150499983236 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 52310 11283 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54290993586 48.725 2 0.14520040595115016 0.0010268205528401856 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 11096 4666 DEDKEKTFEEK True H1975_Epitope_Rep3 1396.6358045066397 1396.63414490379 23.071 3 0.14519542313007505 0.0010268205528401856 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 89746 5942 REYQVKLQA True NCI_RA007_Epitope_Rep4 1133.61930702721 1133.61766490379 29.475 3 0.14519365974605006 0.0010268205528401856 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 21377 6911 ERMAGNEAL True PC9_epitope_Rep3 989.4600295044899 989.4589299358599 31.596 2 0.1451905086401727 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 9858 20420 AYLPVNESF True PC9_epitope_Rep5 1038.5022115863 1038.50110993586 83.58 2 0.14518934392766106 0.0010268205528401856 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 94558 9879 RYIPTAAAF True NCI_RA007_Epitope_Rep5 1008.5392658013599 1008.53816993586 44.644 2 0.14518742019416342 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 114926 11747 TTEVVNELY True H1975_Epitope_Rep3 1066.51825557326 1066.51767496793 50.328 1 0.14518680311404905 0.0010268205528401856 0.9438714419765777 ['ENSG00000113719|ENST00000393784|ERGIC1', 'ERGIC1-RANBP17|1|fusion', 'ERGIC1-RANBP17|2|fusion'] 128905 8718 VSTEVDARL True PC9_epitope_Rep6 988.5189242795998 988.51782993586 43.392 2 0.1451818344604682 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 60244 16998 LIDTLLDGY True H1975_Epitope_Rep2 1021.5331773614098 1021.53267496793 70.636 1 0.14517777221699701 0.0010268205528401856 0.9438714419765777 ['nc|nan|Q9BWL3-5|C1orf43', 'nc|nan|Q9BWL3-3|C1orf43', 'nc|nan|Q9BWL3-4|C1orf43', 'nc|nan|Q9BWL3-2|C1orf43', 'ENSG00000143612|ENST00000368521|C1orf43'] 37681 13956 HALGLLYHV True PC9_epitope_Rep4 1021.5709002828102 1021.56980993586 61.584 2 0.14517188648026966 0.0010268205528401856 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 103874 21217 SRLEILNVL True PC9_epitope_Rep5 1055.63389446219 1055.63278993586 86.659 2 0.14517178494077937 0.0010268205528401856 0.9438714419765777 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1'] 140914 19325 YYWQTSAKW True PC9_epitope_Rep1 1231.5662088251897 1231.5651099358602 79.139 2 0.14515921643254048 0.0010268205528401856 0.9438714419765777 ['ENSG00000142687|ENST00000325722|KIAA0319L', 'nc|ENSG00000142687|Q8IZA0-2|KIAA0319L', 'ENST00000476329.1_1_1:35998986-36020116:-|nuORF'] 46523 6923 ITQGTPLKY True H1975_Epitope_Rep3 1019.5651461960299 1019.56404993586 31.59 2 0.1451487284515956 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.D1460N|1|0.44|ENSG00000196498|chr12:124344933-124344933|C/T|missense_variant'] 339 16812 AAIYLVTSL True H1975_Epitope_Rep2 949.54843350273 949.54732993586 69.915 2 0.1451474630600547 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 131523 18836 VVVGDLVEV True PC9_epitope_Rep6 927.5276980581499 927.52660993586 85.098 2 0.14514318565634926 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 28643 8254 FSSDDSKLEY True H1975_Epitope_Rep2 1189.5138984688099 1189.51280993586 36.703 2 0.1451425129048125 0.0010268205528401856 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2'] 127072 16110 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 74.306 2 0.14513349213855464 0.0010268205528401856 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 140850 15051 YYTDIM[Oxidation]HTL True PC9_epitope_Rep5 1171.5219614351497 1171.5208699358602 62.9 2 0.14513106785381794 0.0010268205528401856 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 94927 8114 RYPDSHQLF True NCI_RA007_Epitope_Rep4 1161.55670677065 1161.5550749037902 37.997 3 0.1451296367324547 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 102952 11066 SQIPAQPSV True PC9_epitope_Rep4 925.48689587533 925.4863449679301 50.342 1 0.14512836009016883 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 97557 10236 SGVHTFPAVLQ True NCI_RA007_Epitope_Rep3 1154.6084079903399 1154.60730993586 47.34 2 0.1451265930321882 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3', 'CON__ENSEMBL:ENSBTAP00000024466', 'CON__ENSEMBL:ENSBTAP00000024462'] 52179 8799 KMDDLNLHY True H1975_Epitope_Rep3 1147.53319444475 1147.53154490379 38.851 3 0.14512563523754957 0.0010268205528401856 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF', 'SPRYD3|p.N13K|1|0.38|ENSG00000167778|chr12:53077246-53077246|G/T|missense_variant'] 85013 20146 QIFNGTFVKL True PC9_epitope_Rep2 1165.64954452633 1165.64844993586 82.904 2 0.14512140937983184 0.0010268205528401856 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 105340 4891 STVSADPVVK True NCI_RA007_Epitope_Rep4 1001.5393253710099 1001.53822993586 25.263 2 0.14511458454384704 0.0010268205528401856 0.9438714419765777 ['ENSG00000136051|ENST00000332180|WASHC4'] 1790 7457 AEIAESVQA True H1975_Epitope_Rep3 916.45017601344 916.44962496793 33.662 1 0.14511424620907443 0.0010268205528401856 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 52616 7475 KQDGTIQNL True PC9_epitope_Rep3 1015.52982331647 1015.52872993586 33.756 2 0.1451096990935972 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'PDE4DIP|p.R930Sfs*80|1|0.35|ENSG00000178104|chr1:148981371-148981371|G/-|frameshift_variant', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 95669 11985 SAVTNIPHV True PC9_epitope_Rep5 936.50288029264 936.50178993586 51.096 2 0.1451089204458518 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'TTC3|p.E1565Kfs*6|1|0.26|ENSG00000182670|chr21:37182841-37182841|A/-|frameshift_variant', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF'] 23994 14891 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep1 1300.57578791316 1300.57468993586 62.098 2 0.14510398594851967 0.0010268205528401856 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 114202 15336 TRVDPLTL True PC9_epitope_Rep5 913.5232813840499 913.52218993586 64.0 2 0.14510257978867888 0.0010268205528401856 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10', 'nc|ENSG00000100065|Q9BWT7-2|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF'] 8332 19737 ATLPTTLGV True PC9_epitope_Rep3 871.5014833103099 871.50038993586 81.146 2 0.14510147046027663 0.0010268205528401856 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 72143 21825 MRFLAATFL True PC9_epitope_Rep5 1068.57902243836 1068.57792993586 88.982 2 0.145101402897577 0.0010268205528401856 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 26545 18432 FIVHTIEEI True PC9_epitope_Rep4 1099.5913609438699 1099.59026993586 78.967 2 0.1451009754578382 0.0010268205528401856 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 107558 8769 TADVHGLYY True H1975_Epitope_Rep1 1037.48181049489 1037.4807099358602 38.66 2 0.14509980290392777 0.0010268205528401856 0.9438714419765777 ['ENST00000476493.5_1_1:33099602-33116090:-|nuORF'] 38243 14106 HEYPWILSA True H1975_Epitope_Rep1 1114.54474510462 1114.5441749679298 59.428 1 0.14509879781770174 0.0010268205528401856 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 97694 13761 SHDVVVMTV True PC9_epitope_Rep1 985.49026700361 985.48916993586 57.776 2 0.14509782422956055 0.0010268205528401856 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6'] 93812 16777 RVAQLEQVYI True PC9_epitope_Rep2 1217.6768219033297 1217.67572993586 69.78 2 0.14509145098346812 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 47447 23533 IYILDPELL True PC9_epitope_Rep1 1087.61651306255 1087.61540993586 95.309 2 0.1450857722713011 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 44966 9677 IQHPNVITL True NCI_RA007_Epitope_Rep3 1033.59202965021 1033.59092993586 45.141 2 0.14507954506167065 0.0010268205528401856 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'ENST00000472344.1_1_9:90113992-90254278:+|nuORF'] 2130 6116 AELSELHSA True H1975_Epitope_Rep3 955.4610750503101 955.45996993586 28.537 2 0.14507654242397058 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000171444|P23508|MCC'] 40472 6478 HSDTDALGY True H1975_Epitope_Rep2 977.4090394774498 977.40794993586 29.835 2 0.1450748095892968 0.0010268205528401856 0.9438714419765777 ['ENSG00000163898|ENST00000296252|LIPH'] 34786 18775 GQTEVFQAL True PC9_epitope_Rep4 991.4974605590297 991.49636993586 80.301 2 0.14506677134024581 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'ENST00000574957.1_1_16:3074279-3075849:+|nuORF', 'ENST00000576143.5_1_16:3074279-3076060:+|nuORF', 'ENST00000571046.1_1_16:3074279-3076290:+|nuORF', 'ENST00000574498.5_1_16:3074279-3076221:+|nuORF'] 419 19016 AALPNVYEV True PC9_epitope_Rep4 974.5072969667399 974.50618993586 81.235 2 0.14506006721809608 0.0010268205528401856 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 54084 16001 KYMDINFDF True NCI_RA007_Epitope_Rep1 1191.52704643515 1191.5259499358601 66.344 2 0.14504754168834538 0.0010268205528401856 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 32272 13668 GFQNALIVR True PC9_epitope_Rep4 1016.5767139392399 1016.57560993586 60.466 2 0.14504433060399385 0.0010268205528401856 0.9438714419765777 ['CON__P02769'] 127000 13321 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 56.252 2 0.14504392226962773 0.0010268205528401856 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 94967 12891 RYPTSIASL True PC9_epitope_Rep6 1006.5447451046199 1006.54364993586 61.113 2 0.14504042468011163 0.0010268205528401856 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 7529 9485 ASEVCPPPGY True H1975_Epitope_Rep2 1018.4429824580197 1018.44188993586 41.453 2 0.1450392406805149 0.0010268205528401856 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3'] 113838 12841 TREEGTPLTL True PC9_epitope_Rep3 1115.5822528121498 1115.5811499358601 54.413 2 0.14503751008220309 0.0010268205528401856 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 14866 12161 DYFEQYGK True PC9_epitope_Rep4 1048.4501760134401 1048.44906993586 54.594 2 0.14503747837588996 0.0010268205528401856 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 76168 14657 NRSEWTDEL True PC9_epitope_Rep5 1148.50981614788 1148.50870993586 61.382 2 0.14503561307604593 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 112304 7818 TMDNPTTTQY True H1975_Epitope_Rep2 1170.48630382198 1170.4852099358602 35.019 2 0.14503491310256977 0.0010268205528401856 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 20086 10965 ENGVYLIDVK True H1975_Epitope_Rep3 1148.6077392839998 1148.60664993586 47.266 2 0.14503313069289725 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF', 'FLNA|p.R2395Q|1|0.13|ENSG00000196924|chrX:154350180-154350180|C/T|missense_variant'] 104671 5105 STAAVGVLK True NCI_RA007_Epitope_Rep5 844.50181766348 844.50072993586 26.333 2 0.14503063899831545 0.0010268205528401856 0.9438714419765777 ['ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF'] 86700 8284 QRIDSDDAL True PC9_epitope_Rep1 1031.4883524273098 1031.48724993586 36.698 2 0.14502478802523125 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 44045 22766 ILLDRLLYL True PC9_epitope_Rep3 1130.7063311264599 1130.7052299358602 92.838 2 0.14502159587380026 0.0010268205528401856 0.9438714419765777 ['ENSG00000143303|ENST00000368216|METTL25B'] 117103 13092 TYSEKTTLF True PC9_epitope_Rep2 1088.5389910178399 1088.5378899358602 55.635 2 0.14501872723796347 0.0010268205528401856 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 75791 10181 NRAQIQAVI True PC9_epitope_Rep4 1011.58252759567 1011.58142993586 46.838 2 0.14501528529888363 0.0010268205528401856 0.9438714419765777 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 14264 4811 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 23.874 2 0.14501250493854484 0.0010268205528401856 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 86805 13651 QRNPQGFVL True PC9_epitope_Rep5 1057.5668775315298 1057.56578993586 57.532 2 0.145003126797473 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 22658 15538 ETSDIQIFY True H1975_Epitope_Rep2 1114.51825557326 1114.51714993586 64.922 2 0.14500192340385626 0.0010268205528401856 0.9438714419765777 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 114018 14807 TRMPDGPVAL True PC9_epitope_Rep3 1055.54336520563 1055.54226993586 62.089 2 0.14500070249515476 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 97808 13630 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 57.719 2 0.1449989519308302 0.0010268205528401856 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 106739 17492 SYDPDFNQL True PC9_epitope_Rep6 1097.46655435357 1097.46544993586 79.911 2 0.14499004962094386 0.0010268205528401856 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 9865 14332 AYMPHTFFI True NCI_RA007_Epitope_Rep3 1125.53173789277 1125.53064993586 63.69 2 0.14498954083083948 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 44077 23598 ILLPQFLGV True PC9_epitope_Rep5 998.6164534928998 998.61534993586 95.748 2 0.14498766773561136 0.0010268205528401856 0.9438714419765777 ['ENSG00000099282|ENST00000373290|TSPAN15'] 1925 7004 AEINHSFTP True H1975_Epitope_Rep2 1014.47705946762 1014.47596993586 31.864 2 0.14498627843271722 0.0010268205528401856 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 25330 8586 FEFDTKTSA True NCI_RA007_Epitope_Rep2 1044.47639076128 1044.47528993586 38.041 2 0.14498509238672083 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 24771 16737 FAYEGPMYL True H1975_Epitope_Rep2 1089.4841189940098 1089.48302993586 69.613 2 0.14498479708182244 0.0010268205528401856 0.9438714419765777 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'RNF145|p.P393Lfs*7|1|0.15|ENSG00000145860|chr5:159163023-159163023|G/-|frameshift_variant'] 76772 14994 NVDAILEEY True H1975_Epitope_Rep1 1064.50260550912 1064.50207496793 62.919 1 0.14498406763069216 0.0010268205528401856 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2'] 108971 8219 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 36.567 2 0.14497986420060724 0.0010268205528401856 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 4429 17870 AIVKEIVNI True PC9_epitope_Rep1 997.6171817688898 997.61608993586 73.531 2 0.1449796791611662 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 73798 9085 NHDTALTL True PC9_epitope_Rep4 883.43994568291 883.43884993586 42.532 2 0.14497654122981327 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 140551 15369 YYLNEIQSF True NCI_RA007_Epitope_Rep3 1175.5498900547097 1175.5487899358602 68.014 2 0.1449761999920137 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 28054 21913 FRDFIPVVL True PC9_epitope_Rep1 1104.6331661861998 1104.63206993586 89.104 2 0.14496856879341624 0.0010268205528401856 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 39782 19221 HQDNNFLYL True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 79.306 2 0.14496605865285417 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196236|Q9NQH7-3|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-5|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-2|XPNPEP3', 'nc|ENSG00000196236|Q9NQH7-4|XPNPEP3', 'ENSG00000196236|ENST00000357137|XPNPEP3'] 61596 17319 LLGPRLVLA True PC9_epitope_Rep6 950.6276868829399 950.62658993586 79.231 2 0.14496591897239117 0.0010268205528401856 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 116780 20264 TYLPAPEGLKF True PC9_epitope_Rep3 1234.65977485686 1234.6586699358602 83.207 2 0.14496288379695993 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 86746 18018 QRLETILSL True PC9_epitope_Rep6 1071.62880908175 1071.6277099358601 81.934 2 0.14495888961100845 0.0010268205528401856 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 7294 7454 ARPSSTITY True PC9_epitope_Rep3 994.5083595959 994.50726993586 33.676 2 0.14495591106533323 0.0010268205528401856 0.9438714419765777 ['ENSG00000159596|ENST00000372025|TMEM69'] 136520 8970 YHNPTANSF True PC9_epitope_Rep5 1049.45665837621 1049.45556993586 39.446 2 0.14495501770383729 0.0010268205528401856 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 94914 13770 RYPDRITLI True PC9_epitope_Rep4 1145.65569253593 1145.65458993586 60.86 2 0.14495228947864203 0.0010268205528401856 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 73800 10428 NHDTALTL True PC9_epitope_Rep5 883.43994568291 883.43884993586 45.098 2 0.14495107276141941 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 94592 18432 RYKLYQEMF True PC9_epitope_Rep1 1276.6274291827597 1276.62577490379 75.689 3 0.1449470304514214 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 91815 7524 RPNDIM[Oxidation]AEV True PC9_epitope_Rep2 1059.50189469691 1059.5007899358602 34.309 2 0.1449407890091213 0.0010268205528401856 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 137233 13966 YLETVAAYY True H1975_Epitope_Rep2 1091.51752729727 1091.51642993586 58.868 2 0.14493545024228685 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 128400 9843 VSDTVVEPY True H1975_Epitope_Rep3 1007.4811417885498 1007.48004993586 42.89 2 0.14493157609026322 0.0010268205528401856 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 73956 20113 NHMAVAFVL True PC9_epitope_Rep3 1000.5164221818 1000.51532993586 82.616 2 0.14493103726662107 0.0010268205528401856 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 38750 8345 HHVLQNDVL True PC9_epitope_Rep4 1073.56179215109 1073.5606899358602 39.557 2 0.1449309077679109 0.0010268205528401856 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 115469 16796 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep5 1178.5641606002998 1178.56306993586 69.614 2 0.14492834861434223 0.0010268205528401856 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 103709 12867 SREDSTMIL True PC9_epitope_Rep3 1050.5015599633 1050.50046993586 54.512 2 0.14491165238800305 0.0010268205528401856 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 39700 7758 HPTWALKEA True PC9_epitope_Rep4 1051.5450794577898 1051.54398993586 37.232 2 0.1448996217238074 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 138009 10313 YQAVTATLEEK True PC9_epitope_Rep2 1251.63468230783 1251.63358993586 44.998 2 0.14489522679518615 0.0010268205528401856 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 102862 15958 SQHGVIIQL True PC9_epitope_Rep1 993.5607295219299 993.56018496793 66.193 1 0.1448894518910212 0.0010268205528401856 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 132529 19485 VYPGDPLRF True PC9_epitope_Rep1 1062.5498304850598 1062.5487299358601 79.767 2 0.14487031687029037 0.0010268205528401856 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 47117 15527 IVWQEDPRL True PC9_epitope_Rep6 1154.6084079903396 1154.60730993586 71.901 2 0.14486975143150135 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 22458 5206 ETGVPIAGR True H1975_Epitope_Rep3 898.4872302284999 898.48612993586 25.115 2 0.14486607138761948 0.0010268205528401856 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 72074 17315 MRDITPNLL True PC9_epitope_Rep2 1071.57466533391 1071.5735699358602 71.86 2 0.14486324057232353 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 25233 15430 FEDDAIQLV True H1975_Epitope_Rep2 1048.50769088956 1048.5065899358601 64.509 2 0.1448623469142082 0.0010268205528401856 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 109503 15730 THAAEDIVYTL True PC9_epitope_Rep6 1231.6084675599898 1231.60736993586 72.731 2 0.14485430372434288 0.0010268205528401856 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 75441 9281 NQGPHSPIL True PC9_epitope_Rep5 961.4981292653699 961.49702993586 40.648 2 0.14485195233670334 0.0010268205528401856 0.9438714419765777 ['ENSG00000100147|ENST00000255784|CCDC134'] 77418 20346 NYMPGQLTI True PC9_epitope_Rep2 1035.5059170677498 1035.50480993586 83.683 2 0.1448495164688546 0.0010268205528401856 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 28378 12868 FSDPVYAEAY True H1975_Epitope_Rep1 1160.5026055091198 1160.50207496793 54.565 1 0.14484678369507187 0.0010268205528401856 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 86927 16997 QRSDIATLL True PC9_epitope_Rep3 1015.56620882519 1015.56510993586 70.538 2 0.14484453135301203 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15', 'USP15|p.R710Tfs*14|1|0.16|ENSG00000135655|chr12:62391317-62391318|-/A|frameshift_variant', 'ENST00000546718.5_1_12:62654195-62688116:+|nuORF', 'ENST00000551206.5_1_12:62654195-62696719:+|nuORF', 'ENST00000537297.2_1_12:62654195-62698555:+|nuORF', 'ENST00000548524.5_1_12:62654195-62708744:+|nuORF', 'ENST00000550632.5_1_12:62654195-62749153:+|nuORF', 'nc|ENSG00000135655|Q9Y4E8-4|USP15'] 87077 14425 QSEIASMLY True H1975_Epitope_Rep2 1040.48484727 1040.4842749679299 60.64 1 0.14483839911347252 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 33928 21331 GMPDFLEKL True PC9_epitope_Rep1 1048.52631815916 1048.5252299358601 86.88 2 0.1448288985705185 0.0010268205528401856 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7'] 48922 13398 KEWIQIIQA True NCI_RA007_Epitope_Rep4 1127.63389446219 1127.63278993586 58.71 2 0.1448242856725401 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000127084|Q5JSP0-2|FGD3', 'nc|ENSG00000127084|Q5JSP0-3|FGD3', 'ENSG00000127084|ENST00000375482|FGD3'] 33289 13664 GLATDVQTV True PC9_epitope_Rep2 902.47091145802 902.46980993586 57.85 2 0.144822893008685 0.0010268205528401856 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 91655 11019 RPFQSLIHA True PC9_epitope_Rep2 1067.58761297611 1067.58650993586 47.704 2 0.14481316224607263 0.0010268205528401856 0.9438714419765777 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 132118 12474 VYIPSKTDL True PC9_epitope_Rep4 1034.5648118428599 1034.56370993586 55.787 2 0.14481248419683715 0.0010268205528401856 0.9438714419765777 ['ENSG00000145912|ENST00000274606|NHP2'] 21598 12211 ERSLNTDVL True PC9_epitope_Rep5 1045.54038800017 1045.53928993586 51.956 2 0.14480284753735378 0.0010268205528401856 0.9438714419765777 ['ENSG00000140829|ENST00000268482|DHX38', 'ENST00000569935.1_1_16:72137048-72138114:+|nuORF'] 7674 5131 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep5 990.4618036426001 990.46070993586 24.759 2 0.1448006916203721 0.0010268205528401856 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 127461 9496 VQSNRILGV True PC9_epitope_Rep6 984.5716285587998 984.57052993586 46.781 2 0.14479983252888018 0.0010268205528401856 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 138343 9107 YRAQPSVSL True PC9_epitope_Rep6 1019.5399940773499 1019.53888993586 45.12 2 0.14479779445026944 0.0010268205528401856 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 6114 9581 APNLQNQQV True PC9_epitope_Rep1 1010.5145076055 1010.51340993586 41.71 2 0.1447944344034345 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 74166 8611 NHYQKQLEI True PC9_epitope_Rep3 1171.5985715826298 1171.59691490379 38.07 3 0.14479245329688964 0.0010268205528401856 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 95061 11611 RYSEYAEEF True PC9_epitope_Rep6 1192.5036681382796 1192.50256993586 55.786 2 0.14478150906742865 0.0010268205528401856 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 104393 3577 SSGVPNPPK True NCI_RA007_Epitope_Rep4 881.4606811274899 881.45958993586 19.789 2 0.1447787679245925 0.0010268205528401856 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2'] 113588 8988 TRAGPGTLSV True PC9_epitope_Rep1 957.52434401321 957.52324993586 39.418 2 0.14477493631883237 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 132433 22700 VYNPVIYVF True PC9_epitope_Rep2 1112.5906326678798 1112.5895299358601 92.811 2 0.14477478242917982 0.0010268205528401856 0.9438714419765777 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 109645 11952 THDLVGPEL True PC9_epitope_Rep6 979.49746055903 979.49636993586 57.226 2 0.14477305478384445 0.0010268205528401856 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 43690 5011 IINSSITTK True NCI_RA007_Epitope_Rep4 975.5600608155901 975.55896993586 25.759 2 0.1447730214657589 0.0010268205528401856 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 83669 5504 QEAIENGIHSA True H1975_Epitope_Rep3 1167.55201531303 1167.55090993586 26.223 2 0.1447699797699073 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'ENST00000515125.5_1_5:74018372-74021901:-|nuORF'] 8896 18520 AVGELLQEV True PC9_epitope_Rep6 956.51786165044 956.51676993586 83.879 2 0.14475911133224023 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 31492 9149 GEEM[Oxidation]PGLSV True H1975_Epitope_Rep2 933.4113483570098 933.4107949679301 40.144 1 0.14475363479682862 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 115119 20175 TTYEGIFKTL True PC9_epitope_Rep1 1171.6124903112698 1171.6113899358602 82.432 2 0.1447486589393154 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant', 'ENST00000566080.1_1_16:28837054-28837213:+|nuORF', 'ENST00000432006.1_1_7:16625648-16626215:-|nuORF', 'ENST00000562867.5_1_16:28834808-28837752:+|nuORF', 'ENST00000561539.1_1_16:28836974-28837213:+|nuORF'] 110465 13228 TIPEAFRGV True PC9_epitope_Rep6 988.5341804209198 988.53308993586 62.535 2 0.14474257324814657 0.0010268205528401856 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 28471 9313 FSEQVAM[Oxidation]GY True H1975_Epitope_Rep3 1046.4378974580197 1046.4367899358601 40.817 2 0.14474131462308493 0.0010268205528401856 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 135043 15887 YAITTLHNL True PC9_epitope_Rep2 1044.5603951687601 1044.55928993586 66.363 2 0.14474103570030375 0.0010268205528401856 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000168036|ENST00000349496|CTNNB1', 'ENSG00000173801|ENST00000393931|JUP'] 40174 15082 HRFPFSSAL True PC9_epitope_Rep2 1060.5454138109599 1060.5443099358602 63.27 2 0.14474055295425609 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 11972 19935 DHTVGFIL True PC9_epitope_Rep2 900.4705175351999 900.46942993586 82.077 2 0.1447398541581904 0.0010268205528401856 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 21594 4423 ERSGVNSEL True PC9_epitope_Rep6 989.47778774361 989.47668993586 24.155 2 0.144738060089496 0.0010268205528401856 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 132741 18437 VYSKDNPNLLF True PC9_epitope_Rep1 1308.67140216972 1308.6703099358601 75.708 2 0.1447355034359678 0.0010268205528401856 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 77240 20226 NYIKDLNIL True PC9_epitope_Rep3 1104.61791004488 1104.6168099358601 83.059 2 0.14473231014604432 0.0010268205528401856 0.9438714419765777 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 39682 9064 HPTEDLVVSA True PC9_epitope_Rep6 1066.5294889632999 1066.52838993586 44.928 2 0.14472831596148644 0.0010268205528401856 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 7279 22248 ARPPWMWVL True PC9_epitope_Rep2 1154.60590589254 1154.6048099358602 91.054 2 0.1447242470931444 0.0010268205528401856 0.9438714419765777 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 68411 11517 LTTEVHPEL True PC9_epitope_Rep4 1037.5393253710097 1037.53822993586 52.063 2 0.14472316860738554 0.0010268205528401856 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 58388 9527 LEVNLQAM[Oxidation]K True PC9_epitope_Rep2 1060.5586812970398 1060.55758993586 41.993 2 0.14471767345481365 0.0010268205528401856 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 138420 10288 YRDPYTGQSV True PC9_epitope_Rep4 1184.5462016566 1184.5451099358602 47.258 2 0.14471465350201404 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 113578 19901 TRADLIFTV True PC9_epitope_Rep5 1034.5760452328998 1034.57494993586 81.603 2 0.1447128907384886 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 28468 11643 FSEQVAMGY True H1975_Epitope_Rep3 1030.4429824580197 1030.4418899358602 49.919 2 0.14470590923312 0.0010268205528401856 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 29308 15442 FVDPNGKISL True PC9_epitope_Rep4 1088.5866099165999 1088.58550993586 67.33 2 0.1447051516250011 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 138771 14687 YSDDIPHAL True PC9_epitope_Rep3 1029.47672511445 1029.47562993586 61.631 2 0.14469266963703534 0.0010268205528401856 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 91817 8517 RPNDIM[Oxidation]AEV True PC9_epitope_Rep3 1059.50189469691 1059.5007899358602 37.718 2 0.1446838759424365 0.0010268205528401856 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 44614 12985 IPHSLPGAVAA True PC9_epitope_Rep3 1031.5763795860698 1031.5752899358602 54.973 2 0.14468342849102206 0.0010268205528401856 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 31234 12293 GDLPFVVPR True H1975_Epitope_Rep3 998.5549158654999 998.55380993586 52.464 2 0.1446810550696051 0.0010268205528401856 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 96768 8531 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 37.769 1 0.14467853096000863 0.0010268205528401856 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 47548 23048 IYLTFPVAM True PC9_epitope_Rep2 1053.55689001145 1053.55578993586 94.146 2 0.14467462106249687 0.0010268205528401856 0.9438714419765777 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 103708 12773 SREDSTMIL True PC9_epitope_Rep1 1050.5015599633 1050.50046993586 54.005 2 0.14467439658961598 0.0010268205528401856 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 60155 20016 LHYGLPVVV True PC9_epitope_Rep5 995.5804023373499 995.57930993586 82.043 2 0.14467127750179884 0.0010268205528401856 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 31880 5557 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.4390649679301 26.383 1 0.1446544881233998 0.0010268205528401856 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 64073 18299 LQDVPLSSV True PC9_epitope_Rep2 956.51786165044 956.51676993586 75.711 2 0.1446442585441031 0.0010268205528401856 0.9438714419765777 ['ENST00000524576.5_1_11:66203480-66233392:-|nuORF', 'nc|ENSG00000174547|Q9Y3B7-2|MRPL11', 'nc|ENSG00000174547|Q9Y3B7-3|MRPL11', 'ENSG00000174547|ENST00000310999|MRPL11'] 24363 19038 FAEGFVRAL True PC9_epitope_Rep2 1008.5392658013598 1008.53816993586 78.595 2 0.14463643134145684 0.0010268205528401856 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 132966 22032 VYVDDIYVI True PC9_epitope_Rep2 1097.56447748969 1097.5639749679299 90.218 1 0.14463628328785968 0.0010268205528401856 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 108416 4629 TEEEFSKTP True H1975_Epitope_Rep2 1066.4818700645399 1066.48076993586 22.905 2 0.144627753149148 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 103800 15226 SRGDFVVEY True PC9_epitope_Rep3 1070.50327421546 1070.5021699358601 63.714 2 0.14462535051117412 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 106028 20553 SVLNVLHSL True PC9_epitope_Rep3 980.5654805492 980.56438993586 84.32 2 0.14462154212842185 0.0010268205528401856 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 73847 13710 NHFMDNTTL True PC9_epitope_Rep1 1091.47059418819 1091.46948993586 57.586 2 0.14462108332429235 0.0010268205528401856 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 35799 21329 GTYDIFYTA True PC9_epitope_Rep1 1049.47057710485 1049.47007496793 86.872 1 0.14461753874186437 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 69651 10672 LVVSTQTALA True H1975_Epitope_Rep3 1001.5757108797299 1001.5746099358599 46.123 2 0.14461722728610607 0.0010268205528401856 0.9438714419765777 ['CON__P02769'] 135731 6450 YEKEGEFVA True H1975_Epitope_Rep2 1070.4920408254197 1070.49094993586 29.727 2 0.14461585795905454 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 66603 5950 LSSPATLNSR True PC9_epitope_Rep6 1044.5563724174801 1044.55526993586 31.187 2 0.14461548530869203 0.0010268205528401856 0.9438714419765777 ['CON__P00761'] 140794 11875 YYSHLEGARF True PC9_epitope_Rep1 1241.5829215184897 1241.58127490379 50.544 3 0.14460972624266055 0.0010268205528401856 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 83873 12752 QEIATVVVP True H1975_Epitope_Rep1 954.5385970950199 954.53750993586 54.111 2 0.1446014926918642 0.0010268205528401856 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 137474 21298 YLPELLQTV True PC9_epitope_Rep4 1074.5961119711399 1074.5950099358602 90.09 2 0.1445998290870218 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 54086 15115 KYMDINFDF True NCI_RA007_Epitope_Rep3 1191.52704643515 1191.5259499358601 66.955 2 0.14459570861291746 0.0010268205528401856 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 126999 13216 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 55.843 2 0.14459262941697434 0.0010268205528401856 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 45161 19381 IRDNFVIVY True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 79.925 2 0.1445891262242756 0.0010268205528401856 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 71100 8187 METDPQTISA True H1975_Epitope_Rep2 1091.48049016555 1091.47997496793 36.442 1 0.14458709252616678 0.0010268205528401856 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 31332 11482 GEAIPALAA True H1975_Epitope_Rep2 811.44396843419 811.44341496793 49.221 1 0.14458551050225082 0.0010268205528401856 0.9438714419765777 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 70014 17601 LYGKIAEAF True PC9_epitope_Rep3 1010.5436824754598 1010.54258993586 72.889 2 0.1445798871039665 0.0010268205528401856 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 787 9467 AAYYHPSYL True H1975_Epitope_Rep3 1083.5025459394699 1083.5014499358601 41.419 2 0.1445778441892053 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'GSE1|p.P829Lfs*26|1|0.21|ENSG00000131149|chr16:85663456-85663457|CC/T|frameshift_variant', 'GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 17779 15200 EHVLTTVTL True PC9_epitope_Rep2 1011.56006081559 1011.55896993586 63.728 2 0.14457590589086947 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 109674 12724 THEDGVLEL True PC9_epitope_Rep6 1011.48728979815 1011.48618993586 60.428 2 0.14457568064339898 0.0010268205528401856 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 9565 20404 AYANIISQF True PC9_epitope_Rep4 1025.5181960036098 1025.51767496793 86.631 1 0.14457497959960053 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 87999 6674 QVSDDLTER True PC9_epitope_Rep3 1061.4989171110099 1061.4978299358602 30.695 2 0.1445725053344829 0.0010268205528401856 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF'] 125203 14987 VLQLGNIVFK True NCI_RA007_Epitope_Rep1 1129.68593003505 1129.68482993586 62.36 2 0.14457181061181087 0.0010268205528401856 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 1511 10378 AEEPVFAAA True H1975_Epitope_Rep2 903.4337976733099 903.43324496793 44.93 1 0.1445688267892654 0.0010268205528401856 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 103929 9613 SRPENAIIY True PC9_epitope_Rep4 1061.5505587610498 1061.54946993586 44.602 2 0.14455427820427585 0.0010268205528401856 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 73994 8879 NHQGTYVL True PC9_epitope_Rep1 930.4559301002199 930.45482993586 38.992 2 0.14455166622513865 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 92378 3946 RQQLQAHQL True NCI_RA007_Epitope_Rep4 1120.6101393258398 1120.6090499358602 21.415 2 0.14454848133311254 0.0010268205528401856 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF'] 104921 9033 STFSEIFKK True NCI_RA007_Epitope_Rep4 1085.57571087973 1085.57460993586 41.578 2 0.14454182642951266 0.0010268205528401856 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 38751 10949 HHVLQNDVL True PC9_epitope_Rep5 1073.56179215109 1073.5606899358602 47.105 2 0.14453830521023342 0.0010268205528401856 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 116416 9063 TWNPGRPEPGS True PC9_epitope_Rep1 1196.55743504664 1196.55632993586 39.711 2 0.1445352319661457 0.0010268205528401856 0.9438714419765777 ['CON__P02672'] 70298 20084 LYPEGLAQL True PC9_epitope_Rep4 1002.5385970950199 1002.53807496793 85.387 1 0.1445343211999887 0.0010268205528401856 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 81793 11640 PSEYDTPLY True H1975_Epitope_Rep1 1083.47605640811 1083.47547496793 49.765 1 0.1445265933395592 0.0010268205528401856 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3', 'nc|ENSG00000183576|Q86TU7-3|SETD3', 'nc|ENSG00000183576|Q86TU7-2|SETD3', 'SETD3|p.Y313Lfs*18|1|0.19|ENSG00000183576|chr14:99405358-99405359|-/A|frameshift_variant'] 77366 24030 NYLPFIMEL True PC9_epitope_Rep3 1138.57326835158 1138.57216993586 97.719 2 0.14452653330429335 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 75638 16772 NQSEKIFSL True PC9_epitope_Rep3 1064.55022440788 1064.54912993586 69.66 2 0.14452349308936369 0.0010268205528401856 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426'] 94474 12617 RYGLVTNEI True PC9_epitope_Rep6 1063.56620882519 1063.5651099358602 59.989 2 0.14452303007496484 0.0010268205528401856 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 92211 2933 RQHNTEIRM True NCI_RA007_Epitope_Rep4 1183.5880239822698 1183.58638490379 16.416 3 0.14452045575632028 0.0010268205528401856 0.9438714419765777 ['FKBP15|p.G1133Vfs*45|2|0.29|ENSG00000119321|chr9:113169311-113169311|C/-|frameshift_variant', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'ENSG00000119321|ENST00000238256|FKBP15'] 87035 4935 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep2 1128.43935401 1128.43824993586 24.065 2 0.14451565683240994 0.0010268205528401856 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 39385 17170 HLVPEVPTV True PC9_epitope_Rep1 989.55458151233 989.55348993586 70.864 2 0.14449841834277435 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 114522 4144 TSGPTTPLK True NCI_RA007_Epitope_Rep4 900.4916469026 900.49054993586 22.231 2 0.14449563486015804 0.0010268205528401856 0.9438714419765777 ['ENSG00000188112|ENST00000341865|C6orf132'] 33773 11760 GLSQSALPYR True PC9_epitope_Rep1 1090.5771078620598 1090.5760099358602 50.109 2 0.14449405283838382 0.0010268205528401856 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 72139 21909 MRFLAATFL True PC9_epitope_Rep1 1068.57902243836 1068.57792993586 89.088 2 0.14449319249508874 0.0010268205528401856 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 128347 10481 VSDNGPCLGY True H1975_Epitope_Rep2 1023.4331460503099 1023.43257496793 45.333 1 0.14449078150079295 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 67501 16026 LTELPDWSY True H1975_Epitope_Rep1 1122.5233409537 1122.52277496793 66.979 1 0.14448877936469284 0.0010268205528401856 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 53410 20979 KVFELDLVTL True PC9_epitope_Rep4 1175.6801759482698 1175.67906993586 88.857 2 0.14448754413886228 0.0010268205528401856 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 32296 19876 GFTIPEAFR True PC9_epitope_Rep1 1036.53418042092 1036.53308993586 81.271 2 0.14448158041378292 0.0010268205528401856 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 138933 13921 YSEEIVEMY True H1975_Epitope_Rep2 1161.4899922200898 1161.48947496793 58.694 1 0.14448076622130088 0.0010268205528401856 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 104670 5620 STAAVGVLK True NCI_RA007_Epitope_Rep4 844.50181766348 844.50072993586 28.218 2 0.14447731863526012 0.0010268205528401856 0.9438714419765777 ['ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF'] 1814 2766 AEIDNIKNQRA True H1975_Epitope_Rep3 1270.6629627443401 1270.66132490379 14.724 3 0.14447707193818254 0.0010268205528401856 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 88536 12059 RAFPALTSL True NCI_RA007_Epitope_Rep3 974.5549158655 974.55380993586 54.556 2 0.14447692296033354 0.0010268205528401856 0.9438714419765777 ['ENSG00000170458|ENST00000302014|CD14'] 140144 10142 YVSGELEHV True PC9_epitope_Rep2 1031.4923751785898 1031.4912699358601 44.35 2 0.14447691187153947 0.0010268205528401856 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 11684 15270 DHDSSEYLL True PC9_epitope_Rep2 1077.46146897313 1077.4603699358602 64.012 2 0.14447619834454414 0.0010268205528401856 0.9438714419765777 ['ENSG00000075461|ENST00000262138|CACNG4'] 74218 12125 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.4842749679299 51.722 1 0.14447354084503006 0.0010268205528401856 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 36840 11056 GVPSTAIREI True PC9_epitope_Rep6 1041.5818588893299 1041.5807699358602 53.44 2 0.14446931298638205 0.0010268205528401856 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'nc|ENSG00000123374|P24941-2|CDK2'] 77466 15389 NYPETLGRLLI True NCI_RA007_Epitope_Rep5 1287.7186867153098 1287.7175899358601 65.896 2 0.1444675124122526 0.0010268205528401856 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 17561 13327 EHIVPNAEL True PC9_epitope_Rep3 1020.52400966004 1020.52290993586 56.295 2 0.14446588559696216 0.0010268205528401856 0.9438714419765777 ['ENSG00000120129|ENST00000239223|DUSP1'] 73677 11292 NGNPITIFQER True H1975_Epitope_Rep1 1287.6571490879098 1287.6560499358602 48.412 2 0.14445215190954377 0.0010268205528401856 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH'] 89037 7574 REEEVTGPVIA True H1975_Epitope_Rep3 1198.61936659686 1198.61826993586 34.115 2 0.14445175969960716 0.0010268205528401856 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 32675 11571 GHNLQTVQL True PC9_epitope_Rep1 1008.53524305008 1008.53414993586 49.387 2 0.14445050512786667 0.0010268205528401856 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 45858 11808 ISQIVSSITAS True NCI_RA007_Epitope_Rep1 1104.60265390356 1104.60154993586 49.91 2 0.14444591441492802 0.0010268205528401856 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 97617 13474 SHAENILQI True PC9_epitope_Rep6 1023.53490869691 1023.53380993586 63.522 2 0.14444427912684113 0.0010268205528401856 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 45737 21698 ISMPDFDLHL True PC9_epitope_Rep2 1186.5692456003 1186.5681499358602 88.939 2 0.14444398634996242 0.0010268205528401856 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 108223 6968 TEAEIAHIA True H1975_Epitope_Rep2 953.4818104948898 953.48070993586 31.723 2 0.14444170048970728 0.0010268205528401856 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1'] 1934 8770 AEIPEEHIP True H1975_Epitope_Rep2 1033.50802524273 1033.5069299358602 38.698 2 0.14443496286244892 0.0010268205528401856 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 28708 19097 FSVDDVQTV True PC9_epitope_Rep5 1008.4763907612801 1008.47528993586 78.486 2 0.14443478696052744 0.0010268205528401856 0.9438714419765777 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 74769 12344 NLLSVAYK True PC9_epitope_Rep6 906.5174677276199 906.51636993586 58.885 2 0.14442277161820538 0.0010268205528401856 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 38745 5125 HHTTQQTFL True PC9_epitope_Rep6 1111.54105670651 1111.53994993586 27.404 2 0.14441566979189988 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 46257 9801 ITDVDNGYY True H1975_Epitope_Rep2 1058.4556553167 1058.45507496793 42.686 1 0.14441031616772307 0.0010268205528401856 0.9438714419765777 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 17229 13491 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 63.596 2 0.14440989971189566 0.0010268205528401856 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 40305 10081 HRQTEVFTL True PC9_epitope_Rep6 1129.58800689893 1129.5869099358601 49.376 2 0.14440603711691818 0.0010268205528401856 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 108262 16158 TEAPPIIFATP True H1975_Epitope_Rep2 1155.6175756917098 1155.61646993586 67.363 2 0.1444050402919613 0.0010268205528401856 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 13153 14068 DLSSVQTLLTK True NCI_RA007_Epitope_Rep1 1203.6710678165498 1203.66996993586 58.751 2 0.14440162084316674 0.0010268205528401856 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 11701 5737 DHFASVHSV True PC9_epitope_Rep4 997.46174375665 997.46064993586 28.894 2 0.14440099995433228 0.0010268205528401856 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 38724 20224 HHSSVIFIF True PC9_epitope_Rep5 1085.56581490237 1085.56470993586 82.838 2 0.14439733025195303 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 70344 19933 LYPQFMFHL True PC9_epitope_Rep6 1194.5895871220598 1194.58848993586 89.332 2 0.14439566091039854 0.0010268205528401856 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 123790 17812 VITETVVEV True PC9_epitope_Rep4 987.5488274255499 987.54772993586 76.546 2 0.1443813680622738 0.0010268205528401856 0.9438714419765777 ['ENST00000514606.1_1_4:139988805-140005344:-|nuORF', 'ELF2|p.V487Efs*6|3|0.16|ENSG00000109381|chr4:139059302-139059305|CCAA/-|frameshift_variant', 'nc|ENSG00000109381|Q15723-4|ELF2', 'nc|ENSG00000109381|Q15723-2|ELF2', 'nc|ENSG00000109381|Q15723-3|ELF2', 'nc|ENSG00000109381|Q15723-1|ELF2', 'ENSG00000109381|ENST00000686138|ELF2'] 6267 9297 APRPTIINA True PC9_epitope_Rep1 951.5501648382299 951.54906993586 40.615 2 0.14437815672965915 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 10999 5336 DDEVQVVR True NCI_RA007_Epitope_Rep5 958.4719740871799 958.47086993586 27.217 2 0.1443645401287042 0.0010268205528401856 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000415894.1_1_1:165788676-165788994:+|nuORF', 'ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 28166 13769 FRMTDQEAI True PC9_epitope_Rep1 1109.5175443806097 1109.51644993586 57.808 2 0.14435676368659736 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 24642 9509 FASGVVKL True H1975_Epitope_Rep2 819.48543932335 819.48434993586 41.545 2 0.1443564705012977 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000100258|Q9BU23-3|LMF2', 'nc|ENSG00000100258|Q9BU23-2|LMF2', 'ENSG00000100258|ENST00000474879|LMF2'] 74136 13156 NHYGGVVSL True PC9_epitope_Rep3 944.4715801643599 944.47048993586 55.634 2 0.14435439258268495 0.0010268205528401856 0.9438714419765777 ['SPACA9|p.A130G|1|0.27|ENSG00000165698|chr9:132888331-132888331|C/G|missense_variant', 'nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 87862 20849 QVLEDFPTI True PC9_epitope_Rep4 1060.54407639828 1060.54357496793 88.35 1 0.14434848540168008 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 27017 19375 FLLPHPGLQV True PC9_epitope_Rep4 1119.6440652230701 1119.64296993586 82.636 2 0.1443419386262966 0.0010268205528401856 0.9438714419765777 ['ENSG00000184743|ENST00000398868|ATL3'] 28025 17797 FRADDTFEAL True PC9_epitope_Rep4 1183.55095268387 1183.54984993586 76.487 2 0.14433826465367264 0.0010268205528401856 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 113627 13985 TRDAGYGGLSL True PC9_epitope_Rep4 1108.5512870370399 1108.55018993586 61.698 2 0.14433690288553913 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 28867 8130 FTDRATLY True H1975_Epitope_Rep2 985.48689587533 985.48578993586 36.222 2 0.14433654638903043 0.0010268205528401856 0.9438714419765777 ['ENSG00000082516|ENST00000285873|GEMIN5', 'GEMIN5|p.E1125Sfs*36|1|0.24|ENSG00000082516|chr5:154896316-154896316|C/-|frameshift_variant'] 84596 16610 QHDPETSVLVL True PC9_epitope_Rep4 1236.635016661 1236.6339099358602 71.866 2 0.14433535848614906 0.0010268205528401856 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 38615 12555 HHIVSIEV True PC9_epitope_Rep3 932.50796567308 932.50686993586 53.313 2 0.14433524268662443 0.0010268205528401856 0.9438714419765777 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 103257 12667 SQSTVKVLI True PC9_epitope_Rep5 973.5807962601699 973.57968993586 53.728 2 0.1443300374063309 0.0010268205528401856 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 90452 17086 RISGETIFVTA True PC9_epitope_Rep5 1192.64518742188 1192.6440899358602 70.743 2 0.14432522058274783 0.0010268205528401856 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 7085 9037 AQYDGAYKV True PC9_epitope_Rep5 1013.4818104948899 1013.48070993586 39.706 2 0.1443225700836014 0.0010268205528401856 0.9438714419765777 ['ENST00000469827.1_1_3:58417358-58419536:-|nuORF', 'ENST00000480626.5_1_3:58417333-58419536:-|nuORF', 'ENST00000482894.5_1_3:58417133-58419536:-|nuORF', 'nc|ENSG00000168291|P11177-3|PDHB', 'nc|ENSG00000168291|P11177-2|PDHB', 'ENSG00000168291|ENST00000302746|PDHB'] 67110 11930 LTDDDLLRY True H1975_Epitope_Rep3 1122.55570371114 1122.55460993586 51.044 2 0.14432196913912965 0.0010268205528401856 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 74815 17817 NLPDEIYHV True PC9_epitope_Rep3 1098.5345743437401 1098.53346993586 73.732 2 0.1443161506016337 0.0010268205528401856 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 102207 7692 SPSPPFGHSA True PC9_epitope_Rep1 982.4508447197801 982.44974993586 34.409 2 0.14430000503061005 0.0010268205528401856 0.9438714419765777 ['ENSG00000141232|ENST00000499247|TOB1'] 83949 9651 QELDGELEA True H1975_Epitope_Rep3 1002.4505699362599 1002.4499749679301 42.139 1 0.14429838053350985 0.0010268205528401856 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 114135 5080 TRSITNTTV True PC9_epitope_Rep4 991.52982331647 991.52872993586 26.19 2 0.1442888160804624 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 32710 7678 GHSGPITSI True PC9_epitope_Rep2 867.4450310633501 867.44392993586 34.903 2 0.14428488025458178 0.0010268205528401856 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF', 'PRPF19|p.F388L|1|0.17|ENSG00000110107|chr11:60898250-60898250|A/G|missense_variant'] 97919 19386 SHNPLANIL True PC9_epitope_Rep3 977.52942939365 977.52832993586 79.792 2 0.1442831409099817 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 118826 11582 VEEGFSIQA True H1975_Epitope_Rep2 978.4658260775799 978.4652749679301 49.614 1 0.1442754885210303 0.0010268205528401856 0.9438714419765777 ['ENSG00000172409|ENST00000533682|CLP1'] 8493 5004 ATVETTIAR True NCI_RA007_Epitope_Rep4 960.52400966004 960.52290993586 25.73 2 0.14427473239492936 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 107424 4776 SYTSHTNEI True NCI_RA007_Epitope_Rep4 1050.4618033263002 1050.4607099358602 24.806 2 0.14426930945588248 0.0010268205528401856 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 126335 9751 VPKNSDPWAA True PC9_epitope_Rep1 1083.53490869691 1083.53380993586 42.366 2 0.14426536515166744 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 86757 18094 QRLINLVGESL True PC9_epitope_Rep6 1240.7139356880398 1240.71282993586 82.234 2 0.1442626242736085 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 106479 13687 SVVGQIAKL True PC9_epitope_Rep6 913.5596668927699 913.55856993586 64.433 2 0.14425862774424741 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 7410 8707 ASAPGYLAITK True NCI_RA007_Epitope_Rep4 1090.60225998074 1090.60116993586 40.283 2 0.1442575407126447 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000109472|P16870-2|CPE', 'ENSG00000109472|ENST00000402744|CPE'] 89098 5904 REFDNMAKV True NCI_RA007_Epitope_Rep3 1108.5335287979199 1108.5324299358601 30.199 2 0.14425068203220717 0.0010268205528401856 0.9438714419765777 ['ENSG00000133142|ENST00000472484|TCEAL4', 'nc|ENSG00000133142|Q96EI5-2|TCEAL4'] 2600 8387 AESLGQYAA True H1975_Epitope_Rep2 908.4239612655999 908.42286993586 37.213 2 0.1442473046627428 0.0010268205528401856 0.9438714419765777 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 67112 11986 LTDDGDMIY True H1975_Epitope_Rep2 1041.43247734397 1041.43197496793 51.186 1 0.14424392594225566 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 43343 21559 IHINIGALEL True PC9_epitope_Rep1 1091.63389446219 1091.63278993586 87.748 2 0.144243678706106 0.0010268205528401856 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF'] 74105 14928 NHVSSPFEL True PC9_epitope_Rep4 1028.4927095317598 1028.4916099358602 65.361 2 0.1442427305327207 0.0010268205528401856 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 83605 5644 QDVDNASLAR True PC9_epitope_Rep3 1087.52580056519 1087.52470993586 26.787 2 0.1442283102173041 0.0010268205528401856 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 88906 6943 REASDLQIAA True H1975_Epitope_Rep2 1072.5512870370399 1072.55018993586 31.626 2 0.144226042892536 0.0010268205528401856 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 75948 13809 NRFPAVNSL True PC9_epitope_Rep2 1016.5403284305199 1016.53922993586 58.4 2 0.14422464358941106 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000108587|O95249-2|GOSR1', 'ENSG00000108587|ENST00000451249|GOSR1', 'nc|ENSG00000108587|O95249|GOSR1'] 6217 2607 APRGDGVQVSA True PC9_epitope_Rep2 1055.5359713260698 1055.5348699358601 14.689 2 0.14422448374016 0.0010268205528401856 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 133215 7056 WEDEGVRAC True H1975_Epitope_Rep1 1063.4392940599098 1063.43818993586 32.173 2 0.14422405224694007 0.0010268205528401856 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 65295 5111 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 24.739 3 0.14422268728532564 0.0010268205528401856 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 35505 7377 GTGIVSAPVPK True NCI_RA007_Epitope_Rep1 1024.59169529704 1024.5905899358602 32.689 2 0.14421899711310365 0.0010268205528401856 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 105758 16512 SVIDHIHLI True PC9_epitope_Rep6 1045.59202965021 1045.59092993586 75.947 2 0.1442181991010819 0.0010268205528401856 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 67541 14320 LTEPTGLLY True H1975_Epitope_Rep1 1005.5382627418498 1005.53767496793 60.271 1 0.14421698915959402 0.0010268205528401856 0.9438714419765777 ['ENSG00000168758|ENST00000305476|SEMA4C'] 2098 11311 AELNEFLTR True NCI_RA007_Epitope_Rep2 1091.56112344475 1091.56002993586 48.587 2 0.14421374516369598 0.0010268205528401856 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 113829 4199 TREEGAQTL True PC9_epitope_Rep5 1003.4934378077497 1003.49234993586 21.223 2 0.14421367337219826 0.0010268205528401856 0.9438714419765777 ['TRIM56|p.F497Sfs*35|1|0.12|ENSG00000169871|chr7:101088800-101088800|T/-|frameshift_variant', 'ENSG00000169871|ENST00000306085|TRIM56'] 77540 19474 NYQVQFVTL True PC9_epitope_Rep6 1110.57095985246 1110.5698699358602 87.57 2 0.14421163144967777 0.0010268205528401856 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 8310 12626 ATLLIFANK True NCI_RA007_Epitope_Rep4 989.59096702105 989.58986993586 55.595 2 0.14420244571112428 0.0010268205528401856 0.9438714419765777 ['ENSG00000213465|ENST00000246747|ARL2'] 12651 9562 DLEIATYR True NCI_RA007_Epitope_Rep2 979.4974605590301 979.49691496793 41.808 1 0.1442023456643622 0.0010268205528401856 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 131002 17739 VVLGEFGVRNV True PC9_epitope_Rep4 1187.6662572196299 1187.6651699358601 76.256 2 0.14419945800706047 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 90416 17315 RIPEQIIVV True PC9_epitope_Rep4 1065.65462990677 1065.6535299358602 74.606 2 0.14419932083987233 0.0010268205528401856 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.D1594N|1|0.08|ENSG00000077235|chr16:27470142-27470142|C/T|missense_variant'] 45384 8404 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.43850993586 37.279 2 0.14419900945304873 0.0010268205528401856 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 6621 18779 APWPPKGLVPA True PC9_epitope_Rep5 1131.64406522307 1131.64296993586 77.246 2 0.14419521087061862 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 106334 5827 SVSDLAPPR True NCI_RA007_Epitope_Rep3 940.4977949122 940.49668993586 29.899 2 0.14419422311795796 0.0010268205528401856 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 45854 11377 ISQIVSSITAS True H1975_Epitope_Rep1 1104.60265390356 1104.60154993586 48.74 2 0.14418877680186426 0.0010268205528401856 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 32100 11198 GEYGKFFVT True H1975_Epitope_Rep2 1046.50729696674 1046.5061899358602 48.112 2 0.144185551460701 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 41128 10989 HYPLNTVTF True NCI_RA007_Epitope_Rep3 1090.54474510462 1090.54364993586 50.312 2 0.144180936134174 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 37782 14692 HAYIISSL True PC9_epitope_Rep4 902.4861675993401 902.48506993586 64.446 2 0.14417712782169678 0.0010268205528401856 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 75652 19449 NQSELAVLL True PC9_epitope_Rep6 985.5444107514498 985.54330993586 87.474 2 0.144167237940159 0.0010268205528401856 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 21335 16031 ERLGQFM[Oxidation]TL True PC9_epitope_Rep5 1109.55393026977 1109.55282993586 66.651 2 0.14416259274308033 0.0010268205528401856 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 136428 14396 YHGAEIVSL True PC9_epitope_Rep2 987.50254593947 987.50144993586 60.636 2 0.14415639822514764 0.0010268205528401856 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 77160 22705 NYFDEQFEF True PC9_epitope_Rep1 1237.4927691014097 1237.49166993586 92.138 2 0.1441476649723546 0.0010268205528401856 0.9438714419765777 ['ENSG00000162639|ENST00000651461|HENMT1'] 134524 15614 WVDSDQLLY True H1975_Epitope_Rep3 1137.53423999057 1137.53367496793 65.477 1 0.14414579776976863 0.0010268205528401856 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 132860 12914 VYTSGIYNI True NCI_RA007_Epitope_Rep4 1028.51786165044 1028.51676993586 56.763 2 0.14412768830151232 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1'] 47113 17202 IVWQEDPRL True PC9_epitope_Rep2 1154.6084079903396 1154.60730993586 71.426 2 0.1441263214182443 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 119841 6180 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51676993586 28.782 2 0.14411791486473938 0.0010268205528401856 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 72144 19524 MRFLAATFL True PC9_epitope_Rep6 1068.57902243836 1068.57792993586 87.762 2 0.14411440178656137 0.0010268205528401856 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 16184 9986 EEEYPGITA True H1975_Epitope_Rep3 1007.4447562798298 1007.44417496793 43.447 1 0.14410536619956346 0.0010268205528401856 0.9438714419765777 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 2891 10740 AEYSNTWTP True H1975_Epitope_Rep3 1067.45598966987 1067.4554749679298 46.39 1 0.1441033959097859 0.0010268205528401856 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 12592 12659 DLDSRVLYY True H1975_Epitope_Rep1 1142.5607890915799 1142.56027496793 53.746 1 0.14409239911818397 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 117194 11336 TYTDVTPRQF True PC9_epitope_Rep6 1226.59315184902 1226.5920499358601 54.638 2 0.14409135317438135 0.0010268205528401856 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 97838 14340 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 60.16 2 0.14408806557816692 0.0010268205528401856 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 37961 6882 HEFLHEVPA True H1975_Epitope_Rep1 1077.5243440132099 1077.5232499358601 31.514 2 0.1440868842307067 0.0010268205528401856 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 27812 19097 FQGVEFHYV True PC9_epitope_Rep1 1124.5290950404801 1124.5279899358602 78.246 2 0.14408564618939285 0.0010268205528401856 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 24185 15171 EYTRALFLL True NCI_RA007_Epitope_Rep3 1124.62299542532 1124.62188993586 67.195 2 0.1440828602488077 0.0010268205528401856 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2'] 32592 10071 GHDASQITL True PC9_epitope_Rep1 940.46140940348 940.4608649679301 43.609 1 0.14408264805707957 0.0010268205528401856 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 102859 10576 SQHGVIIQL True NCI_RA007_Epitope_Rep5 993.5607295219299 993.55962993586 47.315 2 0.1440807025186529 0.0010268205528401856 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 114285 8050 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 38.751 2 0.14408044945280737 0.0010268205528401856 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 33177 6879 GKTVISQSL True NCI_RA007_Epitope_Rep4 931.5338460677499 931.53274993586 33.077 2 0.14407983620835693 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 109686 15083 THEGFNVTL True PC9_epitope_Rep2 1016.4927095317599 1016.49160993586 63.274 2 0.14407650025676638 0.0010268205528401856 0.9438714419765777 ['ENST00000489787.1_1_20:48429459-48431791:+|nuORF', 'SLC9A8|p.R552Afs*4|1|0.18|ENSG00000197818|chr20:49887841-49887841|G/-|frameshift_variant', 'ENSG00000197818|ENST00000361573|SLC9A8', 'nc|ENSG00000197818|Q9Y2E8-2|SLC9A8'] 103733 11886 SREPSQVIF True PC9_epitope_Rep4 1061.5505587610498 1061.54946993586 53.495 2 0.14407112230717348 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 24743 17135 FAYDGKDYL True PC9_epitope_Rep2 1090.4971262058598 1090.49657496793 71.159 1 0.14406017865778054 0.0010268205528401856 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 130494 13373 VTVSDLQHV True PC9_epitope_Rep5 996.5240096600402 996.52290993586 56.455 2 0.1440575108013125 0.0010268205528401856 0.9438714419765777 ['ENSG00000068489|ENST00000262293|PRR11'] 77492 13359 NYPQSVPRL True PC9_epitope_Rep5 1072.56654317836 1072.5654499358602 56.399 2 0.14405356064970692 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 67585 15581 LTETEDWLY True H1975_Epitope_Rep2 1168.5288202569598 1168.52827496793 65.088 1 0.14405246382644887 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 106348 4835 SVSGYIYHK True NCI_RA007_Epitope_Rep3 1052.52909504048 1052.5279899358602 25.997 2 0.14404638762118932 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 116675 17219 TYIQKIFRM True PC9_epitope_Rep2 1198.65325000778 1198.65160490379 71.492 3 0.1440458235682203 0.0010268205528401856 0.9438714419765777 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 31572 10058 GEFSITYKP True H1975_Epitope_Rep3 1040.5178616504397 1040.51676993586 43.726 2 0.14402272713080383 0.0010268205528401856 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 75715 13344 NQVVRFETV True PC9_epitope_Rep5 1090.5771078620598 1090.5760099358602 56.342 2 0.1440224185204023 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000011566|Q8IVH8-3|MAP4K3', 'nc|ENSG00000011566|Q8IVH8-2|MAP4K3', 'ENSG00000011566|ENST00000263881|MAP4K3'] 94916 13780 RYPDRITLI True PC9_epitope_Rep4 1145.65569253593 1145.65405490379 60.9 3 0.14401972015737805 0.0010268205528401856 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 35221 3547 GSGTAEVELKK True NCI_RA007_Epitope_Rep2 1117.59790287629 1117.5968099358602 18.448 2 0.14401109082800886 0.0010268205528401856 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 17562 11731 EHIVPNAEL True PC9_epitope_Rep4 1020.52400966004 1020.52290993586 52.885 2 0.14400706616395312 0.0010268205528401856 0.9438714419765777 ['ENSG00000120129|ENST00000239223|DUSP1'] 94462 14242 RYGDLVDYL True NCI_RA007_Epitope_Rep3 1112.5502244078798 1112.54912993586 63.333 2 0.14399056702614538 0.0010268205528401856 0.9438714419765777 ['ENSG00000113721|ENST00000261799|PDGFRB', 'ENST00000520579.5_1_5:149495328-149514444:-|nuORF'] 71378 11192 MIDPSGVSY True H1975_Epitope_Rep1 967.4320834211501 967.43098993586 48.019 2 0.14399024147320955 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 140507 12499 YYINGKTGL True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 53.075 2 0.14398644774792155 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 55526 13548 LAWLDEHTL True NCI_RA007_Epitope_Rep3 1096.55530978832 1096.5542099358602 60.584 2 0.143985396835122 0.0010268205528401856 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF'] 28382 12848 FSDPVYAEAY True H1975_Epitope_Rep3 1160.5026055091198 1160.50207496793 54.642 1 0.14398516237897763 0.0010268205528401856 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 39934 9548 HQNQLLSSL True NCI_RA007_Epitope_Rep3 1038.5458077337798 1038.54470993586 44.643 2 0.14398247826040347 0.0010268205528401856 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 21003 6710 ERAPGETAL True PC9_epitope_Rep5 942.4770594676199 942.47596993586 30.782 2 0.14398231770347414 0.0010268205528401856 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 89612 8151 RETESQLLP True H1975_Epitope_Rep2 1071.5560380643099 1071.5549499358601 36.303 2 0.1439733499432894 0.0010268205528401856 0.9438714419765777 ['ENSG00000171311|ENST00000370902|EXOSC1', 'ENST00000471049.5_1_10:99197505-99205308:-|nuORF', 'ENST00000476234.5_1_10:99200926-99205742:-|nuORF', 'ENST00000472345.5_1_10:99197505-99205641:-|nuORF'] 136431 13714 YHGAEIVSL True PC9_epitope_Rep4 987.50254593947 987.50144993586 60.639 2 0.14397041997007695 0.0010268205528401856 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 74589 13517 NLDPLTETY True H1975_Epitope_Rep1 1064.50260550912 1064.50207496793 57.114 1 0.14396802687213878 0.0010268205528401856 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 128399 9822 VSDTVVEPY True H1975_Epitope_Rep3 1007.4811417885498 1007.48057496793 42.807 1 0.14396795038969135 0.0010268205528401856 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 67165 10068 LTDFIQKY True H1975_Epitope_Rep1 1026.53859709502 1026.53750993586 43.667 2 0.1439658487409075 0.0010268205528401856 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 74812 17774 NLPDEIYHV True PC9_epitope_Rep1 1098.5345743437401 1098.53346993586 73.164 2 0.14396165685530232 0.0010268205528401856 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 9437 5722 AVVTQVNKV True PC9_epitope_Rep2 956.5654805492 956.56438993586 27.399 2 0.14395879141483442 0.0010268205528401856 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 103552 11478 SRDDTTLNAL True PC9_epitope_Rep3 1104.54111627616 1104.54000993586 49.146 2 0.14394981925298345 0.0010268205528401856 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 85321 15359 QLANEEIAQV True PC9_epitope_Rep2 1113.56660274801 1113.56550993586 64.36 2 0.14394627403825477 0.0010268205528401856 0.9438714419765777 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|5|fusion', 'FGFR3-TACC3|2|fusion', 'FGFR3-TACC3|9|fusion', 'FGFR3-TACC3|14|fusion', 'FGFR3-TACC3|6|fusion', 'FGFR3-TACC3|4|fusion', 'FGFR3-TACC3|1|fusion', 'FGFR3-TACC3|13|fusion', 'FGFR3-TACC3|3|fusion', 'FGFR3-TACC3|15|fusion', 'ENST00000484264.1_1_4:1746256-1746676:+|nuORF', 'ENSG00000013810|ENST00000313288|TACC3'] 43466 8348 IHTDSNTVL True PC9_epitope_Rep1 998.50327421546 998.50216993586 36.944 2 0.14394510693516713 0.0010268205528401856 0.9438714419765777 ['ENSG00000133243|ENST00000255608|BTBD2', 'nc|ENSG00000133243|Q9BX70-2|BTBD2', 'ENST00000589685.2_1_19:1986489-1990887:-|nuORF'] 72343 19450 M[Oxidation]TDPIRILV True PC9_epitope_Rep1 1072.5950668057599 1072.59396993586 79.629 2 0.14394275222205 0.0010268205528401856 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000575978.1_1_17:78112818-78113115:-|nuORF'] 100436 12113 SLPEELNRV True PC9_epitope_Rep6 1055.56112344475 1055.56002993586 57.934 2 0.14393892376617776 0.0010268205528401856 0.9438714419765777 ['ENSG00000137815|ENST00000389629|RTF1', 'NUSAP1-RTF1|1|fusion'] 117049 20878 TYQQLFYLL True NCI_RA007_Epitope_Rep5 1187.6226610721499 1187.6215699358602 87.304 2 0.14393871350456464 0.0010268205528401856 0.9438714419765777 ['ENSG00000145703|ENST00000274364|IQGAP2', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 98938 14960 SIYNGDMEKI True PC9_epitope_Rep5 1168.5434247752798 1168.5423299358602 62.546 2 0.14393666024521715 0.0010268205528401856 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 28182 19860 FRNVEVLIY True PC9_epitope_Rep5 1151.6338944621898 1151.63278993586 81.441 2 0.14393534841182612 0.0010268205528401856 0.9438714419765777 ['ENSG00000155876|ENST00000380527|RRAGA', 'ENSG00000083750|ENST00000374941|RRAGB', 'nc|ENSG00000083750|Q5VZM2|RRAGB', 'ENST00000498762.1_1_X:55748624-55758085:+|nuORF'] 135491 10720 YEDGNVQLV True H1975_Epitope_Rep1 1035.4872897981497 1035.48677496793 46.196 1 0.14392920915575358 0.0010268205528401856 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 13198 18200 DLTDYLMK True PC9_epitope_Rep6 997.47903361357 997.47792993586 82.647 2 0.14392307818291714 0.0010268205528401856 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 109622 14372 THDGSILIV True PC9_epitope_Rep4 953.51819600361 953.51708993586 63.19 2 0.14392129507496046 0.0010268205528401856 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 77141 13645 NYDKVEKLF True PC9_epitope_Rep2 1154.5971746003 1154.59552490379 57.777 3 0.1439175108797851 0.0010268205528401856 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 24407 21539 FAFQAEIAQL True PC9_epitope_Rep4 1136.5866099165999 1136.58550993586 91.028 2 0.14391452324024787 0.0010268205528401856 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 39105 9545 HLDAELDAY True H1975_Epitope_Rep2 1045.4716397340098 1045.4705499358602 41.686 2 0.14390175727885096 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 88841 4879 RDYVAPTA True NCI_RA007_Epitope_Rep4 891.4450310633499 891.44392993586 25.216 2 0.1438953019423487 0.0010268205528401856 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 98068 17964 SHVDLVVMV True PC9_epitope_Rep4 997.52665251233 997.52554993586 77.153 2 0.14388535198260996 0.0010268205528401856 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 89588 3470 RESKVVVPP True NCI_RA007_Epitope_Rep5 1009.5920296502098 1009.59092993586 19.129 2 0.14388405681623734 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 104961 20590 STIAILNSV True PC9_epitope_Rep2 916.5229470308801 916.52184993586 84.631 2 0.14387050184112485 0.0010268205528401856 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 102771 4035 SQEGRPVQV True PC9_epitope_Rep6 998.5145076054997 998.51340993586 22.353 2 0.1438694693527339 0.0010268205528401856 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 69693 15393 LVYEGQLSQA True PC9_epitope_Rep5 1106.56078909158 1106.5596899358602 64.217 2 0.14386892650055716 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 113166 17335 TQDGNIYQL True PC9_epitope_Rep1 1050.4981888350198 1050.49767496793 71.494 1 0.14386523658921238 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 109257 15588 TGAAPIIDVVR True PC9_epitope_Rep1 1110.6397081186199 1110.6386099358601 64.781 2 0.14385542948011226 0.0010268205528401856 0.9438714419765777 ['ENSG00000166441|ENST00000314138|RPL27A'] 35272 5340 GSNGYILNK True NCI_RA007_Epitope_Rep5 964.4977949122 964.49668993586 27.232 2 0.14385086085499912 0.0010268205528401856 0.9438714419765777 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1', 'nc|ENSG00000181090|Q9H9B1-4|EHMT1', 'ENST00000371394.6_1_9:140611085-140686569:+|nuORF'] 6586 18281 APWKPTWPA True PC9_epitope_Rep3 1052.5443511817998 1052.54324993586 75.524 2 0.1438424688857237 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000150687|O95084-2|PRSS23', 'ENSG00000150687|ENST00000280258|PRSS23'] 13737 9841 DQLADLYK True NCI_RA007_Epitope_Rep2 964.4865615221601 964.48546993586 42.904 2 0.14383562476221795 0.0010268205528401856 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 94463 14560 RYGDLVDYL True NCI_RA007_Epitope_Rep4 1112.5502244078798 1112.54912993586 63.38 2 0.14383468899839005 0.0010268205528401856 0.9438714419765777 ['ENSG00000113721|ENST00000261799|PDGFRB', 'ENST00000520579.5_1_5:149495328-149514444:-|nuORF'] 96612 13910 SEMLEIVQA True H1975_Epitope_Rep2 1018.5004973341398 1018.49997496793 58.652 1 0.143828375670054 0.0010268205528401856 0.9438714419765777 ['ENSG00000115756|ENST00000307845|HPCAL1'] 126363 10799 VPLAIVNKA True PC9_epitope_Rep4 923.58040233735 923.57930993586 49.297 2 0.1438276615839546 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 123822 15433 VIVEPLEQL True NCI_RA007_Epitope_Rep4 1038.5961119711399 1038.5950099358602 67.032 2 0.14382468431990342 0.0010268205528401856 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 76626 8878 NTIDPSHPM True PC9_epitope_Rep1 1010.4491304676201 1010.44802993586 38.988 2 0.14382464752175844 0.0010268205528401856 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 83176 9815 PYTKVEESF True PC9_epitope_Rep6 1098.5233409536997 1098.5222499358601 48.215 2 0.14381779394808972 0.0010268205528401856 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 70612 20803 MAAAWPLLL True H1975_Epitope_Rep3 984.5466596809199 984.5461149679301 86.908 1 0.14381315815504422 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 75358 13157 NQDDSILKV True PC9_epitope_Rep1 1030.5294889632999 1030.52838993586 55.473 2 0.14381080604138496 0.0010268205528401856 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 21624 10312 ERSPVIQTL True PC9_epitope_Rep6 1041.58185888933 1041.5807699358602 50.363 2 0.14380627588732608 0.0010268205528401856 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.G10576W|1|0.15|ENSG00000181143|chr19:8939229-8939229|C/A|missense_variant'] 77205 16851 NYGRVFSEW True PC9_epitope_Rep6 1156.53015766964 1156.5290699358602 77.333 2 0.143801155606846 0.0010268205528401856 0.9438714419765777 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 38498 6178 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 28.805 2 0.1437999698628461 0.0010268205528401856 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 11776 14179 DHIHIIAL True PC9_epitope_Rep6 930.52870111766 930.52760993586 66.418 2 0.14379923848437812 0.0010268205528401856 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 87071 14082 QSEIASMLY True H1975_Epitope_Rep1 1040.48484727 1040.4842749679299 59.333 1 0.1437968643643952 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 57122 7860 LEEPKVISA True H1975_Epitope_Rep1 984.54916177872 984.54806993586 35.185 2 0.143795656626505 0.0010268205528401856 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant', 'HERC2|p.K551Sfs*47|1|0.2|ENSG00000128731|chr15:28265923-28265923|C/-|frameshift_variant'] 71151 5456 MEVEAPSKPA True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 26.013 2 0.14379422666140185 0.0010268205528401856 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 1650 6604 AEGDISNVA True H1975_Epitope_Rep2 874.40322582102 874.40267496793 30.313 1 0.14379069406800105 0.0010268205528401856 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 6313 5666 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 26.87 2 0.1437880808913466 0.0010268205528401856 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 29377 14529 FVEPSRQFV True PC9_epitope_Rep3 1107.5712942056298 1107.57018993586 61.007 2 0.1437866680146633 0.0010268205528401856 0.9438714419765777 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 82138 10663 PTDGPPNSFY True H1975_Epitope_Rep3 1093.47163973401 1093.4705499358602 46.09 2 0.1437819148668247 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 89097 9616 REFDGIGAV True NCI_RA007_Epitope_Rep5 962.4821448480598 962.48104993586 43.631 2 0.14378068729651133 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC'] 9491 6435 AWAPKPYHKF True NCI_RA007_Epitope_Rep4 1243.6502132326698 1243.64857490379 31.353 3 0.14376897775675201 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 106826 18541 SYIALPLTL True NCI_RA007_Epitope_Rep3 989.57973363101 989.57918496793 81.133 1 0.14376689479968602 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 65442 11036 LSEWQKELY True H1975_Epitope_Rep3 1194.5920892198599 1194.59098993586 47.539 2 0.1437654729296148 0.0010268205528401856 0.9438714419765777 ['ENSG00000196453|ENST00000247930|ZNF777'] 83784 8597 QEEISAEVAA True H1975_Epitope_Rep2 1045.4927691014097 1045.49166993586 38.022 2 0.14376494719403538 0.0010268205528401856 0.9438714419765777 ['ENST00000463912.5_1_7:139083347-139097327:+|nuORF', 'nc|ENSG00000269955|Q9Y383-3|LUC7L2', 'nc|ENSG00000269955|Q9Y383-2|LUC7L2', 'ENSG00000146963|ENST00000354926|LUC7L2', 'nc|ENSG00000164898|Q96HJ9-2|FMC1'] 86785 13767 QRM[Oxidation]TTQLLL True PC9_epitope_Rep5 1118.6117794990598 1118.6106899358601 57.977 2 0.14376480673149633 0.0010268205528401856 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 115423 15343 TVFDEAIRA True PC9_epitope_Rep2 1020.5240096600398 1020.52290993586 64.296 2 0.14375469367513305 0.0010268205528401856 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 95645 11942 SAVPPGTSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 51.257 2 0.14375259070986524 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 49477 11695 KIYEGQVEV True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 49.86 2 0.1437499471177331 0.0010268205528401856 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 8453 5054 ATSPVVYTR True NCI_RA007_Epitope_Rep5 992.52909504048 992.52798993586 26.14 2 0.1437468392063571 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 103372 12211 SQVPEVTTV True PC9_epitope_Rep6 958.49712620586 958.49602993586 58.334 2 0.1437444137228628 0.0010268205528401856 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 87070 10897 QSEIASM[Oxidation]LY True H1975_Epitope_Rep3 1056.47976227 1056.47917496793 47.0 1 0.14373981868672822 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 132534 18189 VYPGDPLRF True PC9_epitope_Rep4 1062.5498304850598 1062.5487299358601 78.03 2 0.14372906085382808 0.0010268205528401856 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 2886 10678 AEYSNTWTP True H1975_Epitope_Rep2 1067.45598966987 1067.4548899358601 46.096 2 0.1437281385259941 0.0010268205528401856 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 99523 5595 SLETENAGLR True H1975_Epitope_Rep3 1088.5462016566 1088.5451099358602 26.561 2 0.1437227223173037 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 102526 17039 SQADVIPAV True PC9_epitope_Rep5 898.4759968384599 898.47488993586 70.559 2 0.1437205325211552 0.0010268205528401856 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 37312 12722 GVVPTIQKV True PC9_epitope_Rep5 939.5753169569098 939.57420993586 53.943 2 0.14371980200975654 0.0010268205528401856 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 9050 20014 AVIPRLVQL True PC9_epitope_Rep5 1007.64915060351 1007.64804993586 82.035 2 0.14371877157561866 0.0010268205528401856 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 70511 17579 LYTEKFEEF True PC9_epitope_Rep2 1204.5652057656796 1204.5641099358602 72.895 2 0.14371430582013217 0.0010268205528401856 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 28273 11048 FRVKYETEL True PC9_epitope_Rep6 1183.62372370131 1183.62262993586 53.406 2 0.14370438321742726 0.0010268205528401856 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 9263 2602 AVQRTLLEK True NCI_RA007_Epitope_Rep5 1056.6291434349198 1056.6280499358602 14.728 2 0.14368435255923906 0.0010268205528401856 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 89798 6935 RFEEKHAYF True PC9_epitope_Rep2 1225.5880068989297 1225.58635490379 32.077 3 0.14368385733605415 0.0010268205528401856 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 102212 6716 SPSPPFGHSA True PC9_epitope_Rep4 982.4508447197801 982.44974993586 33.021 2 0.14368060529880147 0.0010268205528401856 0.9438714419765777 ['ENSG00000141232|ENST00000499247|TOB1'] 102797 8203 SQFGTEHVL True NCI_RA007_Epitope_Rep3 1016.4927095317599 1016.49160993586 39.399 2 0.14366494925415077 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 31635 6682 GEGTPGLTA True H1975_Epitope_Rep2 801.38684748089 801.3862949679301 30.611 1 0.14366400626225648 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000095066|Q96ED9-2|HOOK2', 'ENSG00000095066|ENST00000397668|HOOK2'] 76752 18171 NTTDIFQTV True PC9_epitope_Rep6 1037.50293986229 1037.50184993586 82.536 2 0.1436639104160962 0.0010268205528401856 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 26305 11554 FIDTTSKF True PC9_epitope_Rep4 957.48074786573 957.47964993586 52.203 2 0.14366286104736878 0.0010268205528401856 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 8510 15605 ATVPGLLKV True PC9_epitope_Rep4 896.5695033004799 896.56840993586 67.948 2 0.1436581290001872 0.0010268205528401856 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 8552 7377 ATYYGAFIKK True NCI_RA007_Epitope_Rep3 1160.6229954253197 1160.6213549037902 36.143 3 0.14365594469930754 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 102590 18652 SQANRLFYL True PC9_epitope_Rep2 1110.5821932425 1110.58108993586 77.11 2 0.1436515410385295 0.0010268205528401856 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 103641 14161 SRDLSSQLL True PC9_epitope_Rep1 1017.54547338061 1017.54436993586 59.292 2 0.14365149751334705 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 123356 19076 VIAEILRGV True PC9_epitope_Rep2 968.6018660579199 968.60076993586 78.741 2 0.14365093010487576 0.0010268205528401856 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 7598 20073 ASIDILHSI True PC9_epitope_Rep5 967.5338460677501 967.53274993586 82.265 2 0.14364876202832805 0.0010268205528401856 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'PSMD11|p.R20L|1|0.1|ENSG00000108671|chr17:32444582-32444582|G/T|missense_variant'] 87382 13746 QTDNIIYVY True H1975_Epitope_Rep1 1127.5498900547097 1127.54937496793 58.014 1 0.14364741549344304 0.0010268205528401856 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF', 'IFT172|p.K94N|1|0.12|ENSG00000138002|chr2:27485032-27485032|C/G|missense_variant'] 138163 8706 YQNENEVGV True PC9_epitope_Rep4 1050.4618033262998 1050.4607099358602 40.982 2 0.1436464053592388 0.0010268205528401856 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 86775 19355 QRMDILDVL True PC9_epitope_Rep6 1101.5852300176098 1101.5841299358601 87.097 2 0.14364399513476175 0.0010268205528401856 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2', 'ENST00000564507.5_1_16:1551718-1556512:+|nuORF'] 113353 5893 TQKSLSLSPG True NCI_RA007_Epitope_Rep4 1016.5502244078799 1016.54912993586 29.29 2 0.14364344282158778 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 1399 14727 AEEFPNLAV True H1975_Epitope_Rep2 988.4865615221598 988.48601496793 61.809 1 0.143643393239242 0.0010268205528401856 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 24648 9676 FASHVSPEV True PC9_epitope_Rep5 971.47124581119 971.47014993586 42.187 2 0.1436424210183713 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000242247|Q9NP61-2|ARFGAP3', 'ENSG00000242247|ENST00000263245|ARFGAP3'] 102574 17894 SQANIAQVL True PC9_epitope_Rep3 942.5134449763399 942.51234993586 74.03 2 0.14363584148489106 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 65107 13821 LSDPAGAIIY True H1975_Epitope_Rep2 1018.5335117145798 1018.53297496793 58.31 1 0.1436350741658265 0.0010268205528401856 0.9438714419765777 ['ENSG00000178921|ENST00000314666|PFAS'] 113265 14580 TQFAEKFQEV True PC9_epitope_Rep5 1225.59790287629 1225.5968099358602 61.083 2 0.14363403447715484 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000051128|Q9NSC5-4|HOMER3', 'nc|ENSG00000051128|Q9NSC5-3|HOMER3', 'nc|ENSG00000051128|Q9NSC5-2|HOMER3', 'ENSG00000051128|ENST00000392351|HOMER3'] 48379 9120 KEAIETIVAA True H1975_Epitope_Rep3 1043.5862755634298 1043.5857749679299 40.069 1 0.14363309620274717 0.0010268205528401856 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 109859 11678 THM[Oxidation]ELYSQL True PC9_epitope_Rep2 1136.51721040788 1136.5161099358602 50.251 2 0.1436259991130888 0.0010268205528401856 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 76704 11158 NTPAM[Oxidation]YVAIQA True H1975_Epitope_Rep1 1193.57505963717 1193.57396993586 47.888 2 0.14362562648743124 0.0010268205528401856 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000428275.1_1_X:53172669-53172729:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 2020 7641 AELATRALP True H1975_Epitope_Rep3 940.5341804209199 940.53308993586 34.374 2 0.1436251905189661 0.0010268205528401856 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 3937 13228 AHDTTLVAL True PC9_epitope_Rep2 939.50254593947 939.50144993586 56.16 2 0.14361971077282226 0.0010268205528401856 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 35173 15302 GSDEPAFMYY True H1975_Epitope_Rep2 1178.45902644498 1178.4579299358602 64.018 2 0.1436117083065596 0.0010268205528401856 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 84922 11544 QHTPTSITL True PC9_epitope_Rep1 996.52400966004 996.52290993586 49.282 2 0.1436074597002738 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'SETD5|p.K832Rfs*8|1|0.2|ENSG00000168137|chr3:9464441-9464441|A/-|frameshift_variant', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF'] 73984 17311 NHQDVAGVFAL True PC9_epitope_Rep6 1169.58292151849 1169.58182993586 79.197 2 0.14360299301963345 0.0010268205528401856 0.9438714419765777 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 14255 3993 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 21.737 2 0.14360036918031913 0.0010268205528401856 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 120020 19091 VFDPKVFTF True PC9_epitope_Rep6 1098.57498260374 1098.57388993586 86.079 2 0.1435996519947744 0.0010268205528401856 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 100479 12973 SLPKGVVEV True PC9_epitope_Rep1 926.54368247546 926.54258993586 54.773 2 0.1435978947038324 0.0010268205528401856 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 99292 5605 SLDGVTNDR True PC9_epitope_Rep1 975.4621376794701 975.46104993586 26.387 2 0.14359757896922543 0.0010268205528401856 0.9438714419765777 ['ENSG00000172893|ENST00000355527|DHCR7', 'ENST00000529990.5_2_11:71155902-71158661:-|nuORF'] 33771 7894 GLSQSALPYR True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 37.057 2 0.1435895344393606 0.0010268205528401856 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 40486 11214 HSELLEDYY True H1975_Epitope_Rep3 1167.50841916555 1167.50732993586 48.234 2 0.14358323552032887 0.0010268205528401856 0.9438714419765777 ['ENSG00000117528|ENST00000370214|ABCD3'] 108359 4895 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 23.956 2 0.14356841974591453 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 11989 6309 DHVTATQL True PC9_epitope_Rep4 883.4399456829101 883.43884993586 31.328 2 0.1435641347588411 0.0010268205528401856 0.9438714419765777 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant'] 104568 5773 SSSKGSLGGGF True NCI_RA007_Epitope_Rep5 982.4719740871798 982.47086993586 28.893 2 0.14356002068468704 0.0010268205528401856 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 60674 12232 LIVENLSSR True PC9_epitope_Rep1 1029.5818588893299 1029.5807699358602 51.911 2 0.1435560220949563 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6', 'ENSG00000116350|ENST00000373795|SRSF4', 'nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5'] 26223 14018 FHWSGNEQM True PC9_epitope_Rep1 1134.45527847722 1134.45418993586 58.758 2 0.14354920656924863 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B'] 68707 13625 LVDDPLEY True H1975_Epitope_Rep3 962.4596780679799 962.45912496793 57.697 1 0.14354523664969582 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 44677 14870 IPLYLKGGVA True PC9_epitope_Rep4 1029.6222671493297 1029.62116993586 65.136 2 0.14354400476250023 0.0010268205528401856 0.9438714419765777 ['ENSG00000112695|ENST00000684430|COX7A2'] 20618 8643 EQEVNILK True PC9_epitope_Rep4 971.5287606873098 971.52766993586 40.736 2 0.14354181976451966 0.0010268205528401856 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 123120 16765 VHDEGVWAL True PC9_epitope_Rep4 1024.4977949121999 1024.49668993586 72.453 2 0.14353201627099593 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 112943 10912 TPRPVIVEP True PC9_epitope_Rep2 1006.5811306133398 1006.58002993586 47.294 2 0.14353165256901423 0.0010268205528401856 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 25338 13828 FEFGVDPSA True H1975_Epitope_Rep3 967.4287122928698 967.42816496793 58.495 1 0.14352722564234463 0.0010268205528401856 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 2713 11252 AETLSSWEA True H1975_Epitope_Rep1 992.445090633 992.44454496793 48.257 1 0.14352587770475705 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 40234 10244 HRIDPTVL True PC9_epitope_Rep5 949.53451477409 949.53340993586 44.39 2 0.1435253948596261 0.0010268205528401856 0.9438714419765777 ['ENSG00000110536|ENST00000326674|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-2|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-3|PTPMT1'] 139405 8913 YTEEDAVSY True H1975_Epitope_Rep3 1075.43458551895 1075.43407496793 39.283 1 0.14351270492738236 0.0010268205528401856 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 35504 6899 GTGIVSAPVPK True H1975_Epitope_Rep1 1024.59169529704 1024.5905899358602 31.577 2 0.14351256707867965 0.0010268205528401856 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 123528 22083 VIIDQLPDL True PC9_epitope_Rep1 1024.580461907 1024.57936993586 89.754 2 0.14351120125182423 0.0010268205528401856 0.9438714419765777 ['ENSG00000162337|ENST00000294304|LRP5', 'PPP6R3-LRP5|6|fusion', 'PPP6R3-LRP5|5|fusion', 'ENST00000529993.5_1_11:68154039-68171824:+|nuORF', 'nc|ENSG00000290796|A4QPB2-2|LRP5L', 'nc|ENSG00000290796|A4QPB2|LRP5L', 'ENSG00000070018|ENST00000261349|LRP6', 'LRP6|p.L805Ffs*10|2|0.2|ENSG00000070018|chr12:12159831-12159831|G/-|frameshift_variant', 'PPP6R3-LRP5|3|fusion', 'PPP6R3-LRP5|1|fusion', 'PPP6R3-LRP5|4|fusion', 'PPP6R3-LRP5|2|fusion'] 84972 10741 QIDPSIQRV True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 46.307 2 0.14351035286479838 0.0010268205528401856 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant'] 40256 17193 HRLISELL True PC9_epitope_Rep5 979.58146496651 979.58036993586 71.153 2 0.14350520764591823 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000154556|O94875-7|SORBS2', 'nc|ENSG00000154556|O94875|SORBS2', 'nc|ENSG00000154556|O94875-11|SORBS2', 'ENSG00000154556|ENST00000695409|SORBS2'] 96280 7006 SEESPQVVEA True H1975_Epitope_Rep2 1073.48768372097 1073.4865899358601 31.872 2 0.14350171904058004 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 3068 11540 AGAEGFVRV True PC9_epitope_Rep2 904.4766655447999 904.47556993586 49.714 2 0.14349522680350602 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 6344 6723 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 30.83 2 0.14349347953141373 0.0010268205528401856 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 107281 19247 SYQKVIELF True PC9_epitope_Rep4 1125.6070110080097 1125.60647496793 82.136 1 0.14349258221184208 0.0010268205528401856 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 139307 8651 YTDMESEDY True H1975_Epitope_Rep2 1151.39648575807 1151.39597496793 38.234 1 0.14349165221208957 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 37554 15194 GYPLWKVTF True NCI_RA007_Epitope_Rep3 1109.59096702105 1109.5898699358602 67.287 2 0.1434915837758725 0.0010268205528401856 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP'] 72148 20848 M[Oxidation]RFLAATFL True PC9_epitope_Rep5 1084.57393743836 1084.57282993586 85.241 2 0.14348984184394378 0.0010268205528401856 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 73542 22207 NFLPPIIARF True PC9_epitope_Rep1 1186.6862643882198 1186.6851699358601 90.24 2 0.14348332032486164 0.0010268205528401856 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 110650 18543 TIVNELVRV True PC9_epitope_Rep2 1041.61824439805 1041.6171499358602 76.677 2 0.14347213042774606 0.0010268205528401856 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 48550 4450 KEGKPPISV True H1975_Epitope_Rep2 953.5545815123298 953.55348993586 22.228 2 0.14346462984197406 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 77546 22121 NYSGAAEYLYF True PC9_epitope_Rep1 1296.56626839484 1296.56567496793 89.901 1 0.14345964936543248 0.0010268205528401856 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 39752 17679 HPYLFPVAA True PC9_epitope_Rep4 1013.5334521449298 1013.53234993586 76.026 2 0.14345954111545137 0.0010268205528401856 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 7107 4755 AQYEDIAQK True NCI_RA007_Epitope_Rep3 1064.5138388991597 1064.51274993586 25.66 2 0.14345319706838008 0.0010268205528401856 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 135525 6537 YEEDPREAV True H1975_Epitope_Rep2 1106.4880180741397 1106.4869299358602 30.055 2 0.14344854684533154 0.0010268205528401856 0.9438714419765777 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1'] 5012 20174 ALLDRIVSV True PC9_epitope_Rep5 984.59678067748 984.59568993586 82.647 2 0.14343812296060457 0.0010268205528401856 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 9744 9182 AYLEAHETF True NCI_RA007_Epitope_Rep5 1079.4923751785898 1079.4912699358601 41.969 2 0.14343741840942967 0.0010268205528401856 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 105566 13797 SVDSQILYY True H1975_Epitope_Rep2 1086.5233409537 1086.52277496793 58.217 1 0.14343597782229922 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 105558 10236 SVDSHFQEV True PC9_epitope_Rep3 1046.4668887067398 1046.4657899358601 44.323 2 0.14343396789290666 0.0010268205528401856 0.9438714419765777 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 109563 13636 THASQIELL True PC9_epitope_Rep2 1010.5396597241798 1010.53856993586 57.743 2 0.14343007989199064 0.0010268205528401856 0.9438714419765777 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 37877 7998 HEAESVLAV True H1975_Epitope_Rep3 953.4818104948898 953.48070993586 35.735 2 0.14342088212736798 0.0010268205528401856 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 1145 6190 AEAPSPAPTP True H1975_Epitope_Rep3 936.4552613938799 936.45416993586 28.822 2 0.1434166723443623 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'ENST00000525051.5_1_8:144873596-144874681:-|nuORF'] 48797 2890 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 15.271 2 0.14341409586486709 0.0010268205528401856 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 6218 4249 APRGDGVQVSA True PC9_epitope_Rep4 1055.5359713260698 1055.5348699358601 22.736 2 0.14341128785164267 0.0010268205528401856 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 89621 9405 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.5496749679298 41.142 1 0.14340827921889246 0.0010268205528401856 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 131837 17320 VYAQVARLF True PC9_epitope_Rep6 1065.5971150306498 1065.5960099358601 79.235 2 0.1434079834842547 0.0010268205528401856 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 7159 17032 ARAIYAYAL True PC9_epitope_Rep5 1010.5549158654998 1010.55380993586 70.531 2 0.14340293816470587 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 67357 5244 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep3 1056.49099566004 1056.4898899358602 25.255 2 0.14339877714745958 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 21153 21101 ERDTYMLLL True PC9_epitope_Rep5 1152.58489566444 1152.58378993586 86.23 2 0.14339781234813798 0.0010268205528401856 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 74232 12034 NIDPITM[Oxidation]AY True H1975_Epitope_Rep3 1052.48484765044 1052.4842749679299 51.449 1 0.1433967617888195 0.0010268205528401856 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 135207 10359 YAVLRDAD True PC9_epitope_Rep5 921.4555957470499 921.45448993586 44.83 2 0.1433852652003219 0.0010268205528401856 0.9438714419765777 ['ENSG00000100151|ENST00000356976|PICK1'] 117005 10529 TYQDIQNTI True NCI_RA007_Epitope_Rep4 1094.52440358286 1094.52387496793 47.346 1 0.1433843345100802 0.0010268205528401856 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 97611 10957 SHAELETAL True PC9_epitope_Rep5 969.47672511445 969.47562993586 47.136 2 0.1433685737718994 0.0010268205528401856 0.9438714419765777 ['GPC1|p.P538Rfs*15|1|0.17|ENSG00000063660|chr2:240466222-240466222|C/-|frameshift_variant', 'ENSG00000063660|ENST00000264039|GPC1', 'nc|ENSG00000063660|P35052-2|GPC1', 'ENST00000469694.5_1_2:241381745-241403123:+|nuORF'] 132491 11170 VYPEKLATKF True PC9_epitope_Rep2 1194.6648602372995 1194.66322490379 48.291 3 0.1433673396513426 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 139796 18563 YVDDFGVSV True PC9_epitope_Rep6 999.4549270407099 999.4543749679301 84.042 1 0.14336660181660288 0.0010268205528401856 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 28310 14813 FRYPTTEEL True PC9_epitope_Rep4 1154.5607890915799 1154.5596899358602 64.916 2 0.14336000469833785 0.0010268205528401856 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 70971 6125 M[Oxidation]EQELAHAV True H1975_Epitope_Rep3 1042.4753455958999 1042.4742499358601 28.572 2 0.14335483751292216 0.0010268205528401856 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 25278 9579 FEDVAFDEK True NCI_RA007_Epitope_Rep1 1098.48695544498 1098.4858499358602 41.259 2 0.14335298490465642 0.0010268205528401856 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 129260 10204 VTDPSTLEQY True H1975_Epitope_Rep3 1151.53463391339 1151.53352993586 44.295 2 0.1433485161961786 0.0010268205528401856 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 8712 19040 AVDLTLPKV True PC9_epitope_Rep1 954.57498260374 954.57388993586 78.028 2 0.1433467574961827 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 47253 16626 IYENRIYSL True PC9_epitope_Rep1 1169.6080736371698 1169.6069699358602 68.78 2 0.14334587010955066 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF', 'ENST00000430836.1_1_20:3342707-3342845:-|nuORF', 'ENST00000397758.2_1_3:175436135-175436456:-|nuORF'] 86792 13842 QRNEVVVEL True PC9_epitope_Rep5 1084.58767254576 1084.58656993586 58.263 2 0.1433444922577039 0.0010268205528401856 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 84892 19248 QHSIPVFIF True PC9_epitope_Rep6 1086.58621599378 1086.5851099358601 86.688 2 0.14333877025935754 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496255-118496735:-|nuORF'] 2025 7812 AELATRALP True NCI_RA007_Epitope_Rep4 940.5341804209199 940.53308993586 36.735 2 0.1433371682279732 0.0010268205528401856 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 29709 17689 FVPEIFHRI True PC9_epitope_Rep2 1156.6393141958 1156.63765490379 73.322 3 0.14333706546629124 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 1446 13377 AEEIPLKILA True H1975_Epitope_Rep3 1095.6539612004299 1095.65286993586 56.718 2 0.14333553277378364 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'ENST00000435000.2_1_1:146523151-146523364:+|nuORF', 'ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 135621 4962 YEEPPQKPP True H1975_Epitope_Rep2 1083.5236753068698 1083.52256993586 24.169 2 0.14333277368190175 0.0010268205528401856 0.9438714419765777 ['ENSG00000064999|ENST00000360359|ANKS1A'] 71157 4055 M[Oxidation]EVKPSSVTA True H1975_Epitope_Rep2 1063.52196143515 1063.5208699358602 20.682 2 0.14333190051993558 0.0010268205528401856 0.9438714419765777 ['BTG3|p.P193Afs*29|1|0.14|ENSG00000154640|chr21:17594276-17594277|-/T|frameshift_variant', 'ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 119721 6114 VETFSGVYKK True NCI_RA007_Epitope_Rep1 1156.6128246644398 1156.61116490379 27.819 3 0.14332834993148125 0.0010268205528401856 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF'] 83974 4739 QELPSHGV True H1975_Epitope_Rep2 865.4293809992099 865.42828993586 23.32 2 0.14332616832699155 0.0010268205528401856 0.9438714419765777 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 138121 15143 YQITQINHGL True PC9_epitope_Rep3 1185.61422164677 1185.6131299358601 63.387 2 0.14331975077719009 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 44701 22897 IPNSIMTILEA True PC9_epitope_Rep2 1200.6424105405601 1200.6413099358601 93.577 2 0.14331596552697903 0.0010268205528401856 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 76290 13282 NSDVSLLNY True H1975_Epitope_Rep1 1023.48728979815 1023.4861899358599 56.19 2 0.14331399091397445 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 103783 11566 SRFPQGAQL True PC9_epitope_Rep5 1002.5246783663797 1002.52358993586 49.484 2 0.14331187012120233 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 14789 16577 DWYDVKAPAMF True NCI_RA007_Epitope_Rep3 1341.6063593850097 1341.6052699358602 72.992 2 0.1433097423201844 0.0010268205528401856 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000493479.1_1_4:153472952-153473506:-|nuORF', 'ENST00000507485.1_1_4:152020792-152024033:+|nuORF'] 16249 13724 EEHEWFIPA True H1975_Epitope_Rep2 1156.5189242796 1156.5178299358602 57.934 2 0.14330950755521363 0.0010268205528401856 0.9438714419765777 ['ENST00000511381.1_1_5:138677603-138704484:+|nuORF', 'ENST00000510409.1_1_5:138699473-138700456:+|nuORF', 'ENSG00000120727|ENST00000265192|PAIP2'] 117165 10837 TYSTEPNNL True PC9_epitope_Rep5 1037.46655435357 1037.46544993586 46.672 2 0.14330679351602701 0.0010268205528401856 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 64506 8615 LQYYDISAK True H1975_Epitope_Rep1 1099.5549754351498 1099.5538699358601 38.066 2 0.14330356471246172 0.0010268205528401856 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 76810 16545 NVELDPEIQ True PC9_epitope_Rep3 1055.51350454599 1055.5124099358602 68.779 2 0.14330184016094522 0.0010268205528401856 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 107512 9074 TAAPSPLRL True H1975_Epitope_Rep3 924.53926580136 924.53816993586 39.889 2 0.14330174551743483 0.0010268205528401856 0.9438714419765777 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 68785 13157 LVDPSVYGY True H1975_Epitope_Rep2 1011.49131254943 1011.4907749679301 55.733 1 0.14330144960191088 0.0010268205528401856 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 53864 13175 KYHGYPYSF True PC9_epitope_Rep1 1160.52909504048 1160.52745490379 55.541 3 0.1432996367212026 0.0010268205528401856 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'nc|ENSG00000104723|Q13454-2|TUSC3'] 38766 15166 HHYEGAVVIL True PC9_epitope_Rep3 1136.5978433066398 1136.5961849037901 63.479 3 0.1432976407537029 0.0010268205528401856 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 126367 10170 VPLAIVNKA True PC9_epitope_Rep6 923.58040233735 923.57930993586 49.749 2 0.1432912118174456 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 21250 6603 ERIDTRNEL True PC9_epitope_Rep1 1144.58364979448 1144.5820049037902 30.201 3 0.14329113268861304 0.0010268205528401856 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 31278 15148 GDSVIVVLR True PC9_epitope_Rep1 956.5654805492 956.56438993586 63.088 2 0.14329106182622256 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 96925 4180 SETSGIARP True NCI_RA007_Epitope_Rep4 916.4614094034799 916.46030993586 22.38 2 0.14328952859918853 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 99927 24772 SLIEDLILL True PC9_epitope_Rep5 1027.6165130625498 1027.61540993586 100.43 2 0.14328038389175582 0.0010268205528401856 0.9438714419765777 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF', 'ENST00000470510.5_1_1:245912867-246021878:-|nuORF', 'ENST00000366516.5_1_1:245912867-246093251:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-2|SMYD3', 'ENST00000366517.5_1_1:245912867-246116553:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-3|SMYD3', 'ENSG00000185420|ENST00000490107|SMYD3'] 25436 17355 FELLDRILP True H1975_Epitope_Rep2 1114.63864548946 1114.63754993586 72.05 2 0.1432762085928888 0.0010268205528401856 0.9438714419765777 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF', 'ENST00000585799.5_1_19:11132109-11172489:+|nuORF', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant'] 114003 19659 TRLPTPVLL True PC9_epitope_Rep3 1008.6331661861999 1008.63206993586 80.854 2 0.14327121183652186 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 112584 6491 TPAPSAPAA True PC9_epitope_Rep1 781.39701824177 781.39646496793 29.772 1 0.1432471938623874 0.0010268205528401856 0.9438714419765777 ['ENSG00000130706|ENST00000253003|ADRM1'] 17435 13655 EHFPQAYSV True PC9_epitope_Rep5 1076.49270953176 1076.4916099358602 57.547 2 0.14324133686180857 0.0010268205528401856 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 102045 8314 SPPPPPPPP True PC9_epitope_Rep1 881.4647038787699 881.46360993586 36.814 2 0.14323794657618183 0.0010268205528401856 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 140671 15303 YYPSTPGRYSI True PC9_epitope_Rep3 1302.6244519773 1302.62334993586 64.015 2 0.14323277133365667 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 95913 14637 SDVEAIFSK True PC9_epitope_Rep3 994.49712620586 994.49602993586 61.433 2 0.14322863898182425 0.0010268205528401856 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 107119 19321 SYM[Oxidation]GHFDLL True PC9_epitope_Rep3 1097.48518200361 1097.48408993586 79.54 2 0.14322658639032765 0.0010268205528401856 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 37667 12200 HAGVISVL True PC9_epitope_Rep6 794.46503823194 794.46448496793 58.294 1 0.1432214093866841 0.0010268205528401856 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 48520 11390 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 51.924 2 0.1432176882371049 0.0010268205528401856 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 98092 16485 SHYFQSLEV True PC9_epitope_Rep2 1108.5189242796 1108.5178299358602 68.652 2 0.14321729276913203 0.0010268205528401856 0.9438714419765777 ['ENSG00000168612|ENST00000372523|ZSWIM1'] 102012 3000 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 15.536 2 0.14321526577421753 0.0010268205528401856 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 7095 7393 AQYEDIANR True PC9_epitope_Rep1 1078.5043368446197 1078.5032299358602 33.25 2 0.14321307563879662 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q922U2'] 31961 6149 GESPVDYDGGR True NCI_RA007_Epitope_Rep1 1150.4890807032998 1150.48798993586 27.956 2 0.1432124062058849 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 9085 17447 AVLDDKLYVV True PC9_epitope_Rep6 1133.63322575585 1133.6321299358601 79.727 2 0.14321045788793704 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 123266 10442 VHQLSEEL True PC9_epitope_Rep1 953.4818104948899 953.48070993586 45.053 2 0.14320365829919166 0.0010268205528401856 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 21243 7859 ERHPQTIVL True PC9_epitope_Rep2 1091.60874234351 1091.60764993586 35.597 2 0.14320232973113664 0.0010268205528401856 0.9438714419765777 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 9082 19273 AVLDDKLYVV True PC9_epitope_Rep2 1133.63322575585 1133.6321299358601 79.507 2 0.14320169035654573 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 57984 6460 LEQSYEDPKVA True H1975_Epitope_Rep2 1277.61394686325 1277.6128499358601 29.766 2 0.14320022851883676 0.0010268205528401856 0.9438714419765777 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 31842 11752 GENVFLQAT True NCI_RA007_Epitope_Rep3 977.4818104948899 977.48070993586 53.337 2 0.14319908906998216 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000173369|P02746|C1QB', 'ENSG00000173369|ENST00000509305|C1QB', 'C1QB|p.D226H|1|0.26|ENSG00000173369|chr1:22661306-22661306|G/C|missense_variant'] 28170 11460 FRMTDQEAI True PC9_epitope_Rep6 1109.5175443806097 1109.51644993586 55.143 2 0.14319049354233665 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'ENST00000403105.1_1_6:70415181-70415250:-|nuORF'] 131881 9906 VYDTNPAKF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 45.754 2 0.14318451874958205 0.0010268205528401856 0.9438714419765777 ['ENSG00000139433|ENST00000318348|GLTP'] 29230 14830 FVDEHTINI True PC9_epitope_Rep4 1086.53457434374 1086.53346993586 64.983 2 0.14318446099444718 0.0010268205528401856 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant', 'nc|ENSG00000123384|Q07954-2|LRP1'] 113917 17206 TRIGLINDM True PC9_epitope_Rep3 1031.54336520563 1031.54226993586 71.339 2 0.14318354727236626 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.P364L|1|0.32|ENSG00000107581|chr10:119065430-119065430|G/A|missense_variant'] 96256 8969 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42760993586 39.495 2 0.14317924788794834 0.0010268205528401856 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 130406 10688 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 49.087 2 0.14317753236511127 0.0010268205528401856 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 26268 12667 FIDASRLVY True H1975_Epitope_Rep2 1082.5760452329 1082.57494993586 53.823 2 0.14317736290332975 0.0010268205528401856 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'CTNNA1|p.L776Pfs*102|1|0.11|ENSG00000044115|chr5:138932603-138932604|-/C|frameshift_variant', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 8662 21844 AVATDFFTV True PC9_epitope_Rep3 969.48074786573 969.47964993586 89.325 2 0.1431711190369106 0.0010268205528401856 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 14803 23012 DYATIFNNL True PC9_epitope_Rep5 1069.5080252427301 1069.5069299358602 93.506 2 0.14317072834959121 0.0010268205528401856 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 127071 16025 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 73.966 2 0.1431635153715445 0.0010268205528401856 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 53826 15112 KYGALVNNF True PC9_epitope_Rep1 1024.53418042092 1024.53308993586 62.946 2 0.1431633446072455 0.0010268205528401856 0.9438714419765777 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 25581 7020 FESSGIHVA True H1975_Epitope_Rep2 945.45559574705 945.45448993586 31.927 2 0.14316015154993195 0.0010268205528401856 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 103584 15976 SRDGMNIVL True PC9_epitope_Rep5 1003.5120650773499 1003.51096993586 66.443 2 0.14315864586195104 0.0010268205528401856 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 38764 15162 HHYEGAVVIL True PC9_epitope_Rep3 1136.5978433066398 1136.59674993586 63.463 2 0.14315849144548656 0.0010268205528401856 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 103675 15008 SRDPVQLNL True PC9_epitope_Rep1 1040.56145779792 1040.56036993586 62.549 2 0.1431550302454184 0.0010268205528401856 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 44602 20020 IPHLLGDVV True PC9_epitope_Rep3 961.55966689277 961.55856993586 82.255 2 0.14315409938678383 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 135457 5104 YEAPGVREA True NCI_RA007_Epitope_Rep3 990.4770594676198 990.47596993586 27.069 2 0.1431515438819079 0.0010268205528401856 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 93902 10062 RVIEGDVVSA True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 43.683 2 0.14315062915294124 0.0010268205528401856 0.9438714419765777 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 110726 10504 TKEVNSGFFY True H1975_Epitope_Rep1 1190.5607890915799 1190.56027496793 45.359 1 0.14314613934088882 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 109521 16204 THADYVLEM True PC9_epitope_Rep5 1077.48009624273 1077.47898993586 67.319 2 0.14314218356904163 0.0010268205528401856 0.9438714419765777 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 113793 13583 TRDSLPVSL True PC9_epitope_Rep6 986.53965972418 986.53856993586 63.985 2 0.143140063616091 0.0010268205528401856 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 47691 21103 IYPTTYVQF True PC9_epitope_Rep3 1130.56481184286 1130.56370993586 86.454 2 0.14313918127375358 0.0010268205528401856 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 124618 4937 VLIAAHGNSLR True NCI_RA007_Epitope_Rep3 1149.66184054553 1149.66019490379 26.413 3 0.14313403027642843 0.0010268205528401856 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 2448 4361 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 21.888 2 0.14313312738712355 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 139402 8935 YTEEDAVSY True H1975_Epitope_Rep2 1075.43458551895 1075.43407496793 39.328 1 0.14313087311395503 0.0010268205528401856 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 83734 5651 QEAVTRLEA True H1975_Epitope_Rep2 1015.5298233164699 1015.52872993586 26.734 2 0.14313026308557833 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 114027 9774 TRM[Oxidation]PDGPVAL True PC9_epitope_Rep2 1071.53828020563 1071.5371899358602 42.934 2 0.14312345552671482 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 4140 17392 AHTTVIIDL True PC9_epitope_Rep5 981.5494961318899 981.54838993586 71.9 2 0.14312283659231712 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000138085|Q6UW56-2|ATRAID', 'ENSG00000138085|ENST00000380171|ATRAID', 'nc|ENSG00000138085|Q6UW56-3|ATRAID'] 115866 5590 TVNSPAIYK True NCI_RA007_Epitope_Rep4 991.53384606775 991.53274993586 28.102 2 0.1431199392237848 0.0010268205528401856 0.9438714419765777 ['ENST00000488453.1_1_1:38483328-38489297:+|nuORF', 'ENSG00000183520|ENST00000373014|UTP11'] 113596 19349 TRALMVVSL True PC9_epitope_Rep3 988.5739370579199 988.57282993586 79.647 2 0.14311972405637344 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000181885|O95471-2|CLDN7', 'ENSG00000181885|ENST00000360325|CLDN7'] 107212 13853 SYPDNFLHI True NCI_RA007_Epitope_Rep4 1104.52400966004 1104.52290993586 60.548 2 0.1431184828101758 0.0010268205528401856 0.9438714419765777 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 9559 21400 AYANIISQF True PC9_epitope_Rep1 1025.5181960036098 1025.51767496793 87.149 1 0.14311646286770147 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 32904 9938 GINVTDFTR True H1975_Epitope_Rep1 1021.51925863277 1021.51816993586 43.162 2 0.1431135415405598 0.0010268205528401856 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'MYH9|p.L377F|1|0.27|ENSG00000100345|chr22:36318305-36318305|G/A|missense_variant', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 20691 18969 EQIKFFEEV True PC9_epitope_Rep4 1167.5811901829898 1167.58008993586 81.054 2 0.14310968419684536 0.0010268205528401856 0.9438714419765777 ['ENSG00000143155|ENST00000367833|TIPRL', 'nc|ENSG00000143155|O75663-2|TIPRL'] 7282 22626 ARPPWMWVL True PC9_epitope_Rep5 1154.60590589254 1154.6048099358602 92.03 2 0.1430966634306316 0.0010268205528401856 0.9438714419765777 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51452094-51455913:-|nuORF'] 76803 10629 NVELDPEIQ True NCI_RA007_Epitope_Rep3 1055.51350454599 1055.5124099358602 48.856 2 0.14309354328983637 0.0010268205528401856 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 21558 18034 ERSDTFINL True PC9_epitope_Rep3 1093.54038800017 1093.53928993586 74.569 2 0.14309304460145522 0.0010268205528401856 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 96847 21465 SESPIVVVL True PC9_epitope_Rep3 941.5433481222899 941.54224993586 87.856 2 0.14308684678717165 0.0010268205528401856 0.9438714419765777 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 38755 8247 HHYEGAVVI True PC9_epitope_Rep2 1023.5137793295098 1023.5126899358601 37.079 2 0.14308089242609887 0.0010268205528401856 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 92143 8741 RQAPIPAEL True NCI_RA007_Epitope_Rep4 993.5607295219298 993.55962993586 40.415 2 0.14307875215240584 0.0010268205528401856 0.9438714419765777 ['ENSG00000169583|ENST00000494426|CLIC3'] 94353 8041 RYALIMHKL True NCI_RA007_Epitope_Rep4 1143.65866974139 1143.65701490379 37.696 3 0.14307360691650708 0.0010268205528401856 0.9438714419765777 ['ENSG00000066422|ENST00000312938|ZBTB11'] 118974 5760 VEFATHEEA True NCI_RA007_Epitope_Rep4 1031.4559896698697 1031.4548899358601 28.776 2 0.1430678486798227 0.0010268205528401856 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 117070 19315 TYQTIIELF True NCI_RA007_Epitope_Rep3 1126.5910265906998 1126.58992993586 84.325 2 0.14306509166985096 0.0010268205528401856 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ENST00000595822.1_1_19:47492766-47503942:+|nuORF'] 2870 11508 AEYLGANSVV True H1975_Epitope_Rep2 1021.5080252427299 1021.50692993586 49.323 2 0.14306330921372928 0.0010268205528401856 0.9438714419765777 ['ENST00000496669.1_1_3:87100344-87100812:-|nuORF', 'ENST00000425339.2_1_4:57261520-57265668:-|nuORF', 'ENSG00000128059|ENST00000264220|PPAT'] 107211 20798 SYPDLLPTF True PC9_epitope_Rep6 1051.52261267771 1051.52207496793 92.767 1 0.14306268751528417 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 89144 12967 REGDLLFTVA True NCI_RA007_Epitope_Rep3 1119.5924235730301 1119.5913299358601 58.28 2 0.14306151046842852 0.0010268205528401856 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 67931 15892 LTLGKLEQV True PC9_epitope_Rep2 999.5964463243098 999.59534993586 66.381 2 0.14306005448118803 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 91750 6590 RPKPIITSV True PC9_epitope_Rep2 1009.62841515893 1009.62730993586 30.761 2 0.1430591956309148 0.0010268205528401856 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 74030 13215 NHSDYNMVL True PC9_epitope_Rep2 1091.47059418819 1091.46948993586 56.109 2 0.14304838302063158 0.0010268205528401856 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 56961 4842 LEDVSKPPA True H1975_Epitope_Rep3 954.5022115863 954.50110993586 23.75 2 0.14304634540580402 0.0010268205528401856 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 51983 19334 KLAPPLVTL True PC9_epitope_Rep1 950.6164534929001 950.61534993586 79.174 2 0.14304606349524127 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 102928 15055 SQIHDIVLV True PC9_epitope_Rep6 1022.5760452328999 1022.57494993586 69.955 2 0.1430440041720566 0.0010268205528401856 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 67599 10879 LTETVVTEY True H1975_Epitope_Rep3 1053.52300660053 1053.5224749679298 46.928 1 0.14304152527016242 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 139401 8810 YTEEDAVSY True H1975_Epitope_Rep2 1075.43458551895 1075.43407496793 38.854 1 0.14303723957690886 0.0010268205528401856 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 61965 11327 LLLPGELAK True H1975_Epitope_Rep2 952.5957180483199 952.59462993586 48.618 2 0.14303520558104643 0.0010268205528401856 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 94070 12150 RVVDELDNQM True PC9_epitope_Rep2 1217.57103650545 1217.56992993586 52.045 2 0.14302021971555845 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000085231|Q9Y3D8-2|AK6', 'ENSG00000085231|ENST00000380822|AK6'] 87650 19589 QVAFDFTKV True PC9_epitope_Rep5 1053.54949613189 1053.54838993586 80.401 2 0.14301713635833976 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 44938 10376 IQESNFDRV True PC9_epitope_Rep1 1106.5356369729 1106.53452993586 44.796 2 0.14301434959895748 0.0010268205528401856 0.9438714419765777 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 31825 4770 GENPIYKSA True NCI_RA007_Epitope_Rep3 977.4818104948899 977.48070993586 25.726 2 0.14300508913130902 0.0010268205528401856 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1'] 48046 19418 KALQFLEEV True PC9_epitope_Rep2 1075.5913609438699 1075.59026993586 80.069 2 0.14300188963529983 0.0010268205528401856 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 9539 12271 AYAGSGNVL True PC9_epitope_Rep1 850.41848196234 850.41793496793 52.056 1 0.1430010959235344 0.0010268205528401856 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 131293 21043 VVQPLLVSV True PC9_epitope_Rep3 952.5957180483199 952.59462993586 86.221 2 0.14299642303364501 0.0010268205528401856 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 14155 15994 DSLIFLVDASK True NCI_RA007_Epitope_Rep1 1206.6496040959798 1206.6485099358601 66.316 2 0.14299620666489885 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000464116.2_1_22:42018008-42024264:+|nuORF'] 2896 7373 AEYVVQQEGA True H1975_Epitope_Rep3 1092.50875351872 1092.5076499358602 33.338 2 0.1429928396418373 0.0010268205528401856 0.9438714419765777 ['ENSG00000197601|ENST00000354817|FAR1', 'ENST00000524933.1_1_11:13716477-13732426:+|nuORF'] 95903 8946 SDTVVEPY True H1975_Epitope_Rep3 908.41272787556 908.41217496793 39.407 1 0.14299167669870874 0.0010268205528401856 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 136613 13222 YIDAQFEAY True H1975_Epitope_Rep3 1118.49204082542 1118.49147496793 56.114 1 0.1429797961301276 0.0010268205528401856 0.9438714419765777 ['ENSG00000154997|ENST00000388975|SEPTIN14', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11'] 24697 16396 FAVAPNQNL True PC9_epitope_Rep5 972.50288029264 972.50178993586 68.066 2 0.14297756871684233 0.0010268205528401856 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 91587 14359 RPAQPTLWTA True PC9_epitope_Rep5 1139.60874234351 1139.60764993586 60.233 2 0.1429763528080273 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 92130 11372 RQADFVQVL True NCI_RA007_Epitope_Rep4 1074.5821932425 1074.58108993586 50.655 2 0.14297480188113523 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 9933 16780 AYQHLFYLL True NCI_RA007_Epitope_Rep1 1166.6124307416198 1166.61132993586 69.397 2 0.14297059571322393 0.0010268205528401856 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'ENSG00000140575|ENST00000268182|IQGAP1'] 110105 6801 TIAPALVSK True NCI_RA007_Epitope_Rep5 898.5487678559 898.54766993586 32.846 2 0.14296364905776843 0.0010268205528401856 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 46946 8609 IVLQIDNAR True NCI_RA007_Epitope_Rep5 1040.5978433066398 1040.59674993586 39.791 2 0.1429624456528495 0.0010268205528401856 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001', 'CON__Q6IFX2', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000427733.1_1_13:90882929-90883235:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 23749 22841 EYIQFVPLL True PC9_epitope_Rep4 1120.6168474157198 1120.61627496793 96.081 1 0.14295909568549947 0.0010268205528401856 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 139827 5200 YVDGVEVHN True NCI_RA007_Epitope_Rep3 1030.47197408718 1030.47086993586 27.453 2 0.14295154925003434 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 76296 13423 NSDVSLLNY True H1975_Epitope_Rep3 1023.48728979815 1023.48677496793 56.902 1 0.1429445726726299 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 94960 15367 RYPTSIASL True PC9_epitope_Rep1 1006.5447451046199 1006.54364993586 63.927 2 0.14294384232509758 0.0010268205528401856 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 35592 14978 GTITQVIKV True PC9_epitope_Rep5 957.58588164061 957.58478993586 62.617 2 0.14293758402522297 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000166747|O43747-2|AP1G1', 'ENSG00000166747|ENST00000299980|AP1G1'] 102907 15512 SQIEADFRL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 67.592 2 0.1429371504752843 0.0010268205528401856 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 11174 18863 DEHLQLISL True PC9_epitope_Rep6 1066.56587447202 1066.56476993586 85.205 2 0.14292376495927073 0.0010268205528401856 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 111165 12129 TLETVPLER True PC9_epitope_Rep3 1056.5815245361598 1056.5804299358601 51.696 2 0.14291812950012758 0.0010268205528401856 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1'] 97989 18935 SHSFVVNIL True PC9_epitope_Rep4 1014.5498304850599 1014.54872993586 80.921 2 0.1429171404297884 0.0010268205528401856 0.9438714419765777 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 17782 14378 EHVPGADIL True PC9_epitope_Rep2 949.4868958753299 949.48578993586 60.566 2 0.1429117027022474 0.0010268205528401856 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 138015 21461 YQDEVFGGF True PC9_epitope_Rep1 1060.4501760134397 1060.44967496793 87.39 1 0.14290914691517748 0.0010268205528401856 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 92275 13627 RQLEDTVAL True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 57.48 2 0.14290650858404308 0.0010268205528401856 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 96243 8851 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 39.012 2 0.14290579545245075 0.0010268205528401856 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 132287 17803 VYLDKFIRL True PC9_epitope_Rep6 1165.68593003505 1165.68427490379 81.112 3 0.14290313373805894 0.0010268205528401856 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 9816 10965 AYLHTTTTF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 53.064 2 0.14290256663836418 0.0010268205528401856 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 138266 15133 YQVGVHYEL True PC9_epitope_Rep4 1106.5396597241802 1106.53856993586 66.137 2 0.14289992836277782 0.0010268205528401856 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 24678 8910 FATHAAALSVR True PC9_epitope_Rep3 1142.6196413803798 1142.61799490379 39.224 3 0.14289869730780327 0.0010268205528401856 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 2376 11125 AEQFSSLTP True H1975_Epitope_Rep2 978.4658260775799 978.46472993586 47.827 2 0.14289457207142947 0.0010268205528401856 0.9438714419765777 ['ENST00000366535.3_1_1:244615028-244615205:-|nuORF'] 91813 8569 RPNDIM[Oxidation]AEV True PC9_epitope_Rep1 1059.50189469691 1059.5007899358602 37.798 2 0.14288804445875408 0.0010268205528401856 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 25389 20270 FEILPGLSV True H1975_Epitope_Rep2 973.54843350273 973.54732993586 84.002 2 0.14288792932392586 0.0010268205528401856 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 6284 6006 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 27.916 2 0.14288491004833337 0.0010268205528401856 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 37697 19254 HAMTEFLEV True PC9_epitope_Rep2 1075.50083168731 1075.4997299358602 79.433 2 0.14288208414216763 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 73968 13140 NHNIYITEV True PC9_epitope_Rep2 1101.54547338061 1101.54436993586 55.815 2 0.14287282809848628 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'AMBRA1|p.W132Cfs*22|1|0.22|ENSG00000110497|chr11:46545759-46545759|C/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 108218 9151 TEAEDMISA True H1975_Epitope_Rep3 965.4011772156899 965.4006249679301 40.189 1 0.14287020317993415 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B'] 29256 20383 FVDFNDPNF True PC9_epitope_Rep4 1113.47672511445 1113.47562993586 86.548 2 0.14286959162993038 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 40605 11153 HTDSLHLLI True H1975_Epitope_Rep2 1047.57129420563 1047.57018993586 47.937 2 0.14286863713768283 0.0010268205528401856 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 7330 4815 ARSTDQTVL True PC9_epitope_Rep4 989.51417325233 989.51306993586 25.098 2 0.1428650596477674 0.0010268205528401856 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 22311 15973 ETEEDKFLLLY True H1975_Epitope_Rep2 1398.6918628307799 1398.69127496793 66.64 1 0.1428646367980588 0.0010268205528401856 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 52293 8678 KPAEFTVDA True PC9_epitope_Rep4 976.4865615221598 976.48546993586 40.872 2 0.14286363518191175 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 58132 8490 LESDPQQVV True H1975_Epitope_Rep3 1013.5029398622901 1013.50184993586 37.642 2 0.142850429514224 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1', 'nc|ENSG00000111481|P61923-2|COPZ1'] 103140 20576 SQMPTVIYV True PC9_epitope_Rep2 1036.5263181591597 1036.5252299358601 84.577 2 0.14284749926381748 0.0010268205528401856 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 83702 5504 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 26.183 2 0.14283801164854001 0.0010268205528401856 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 45146 9390 IRAPSGTSL True PC9_epitope_Rep5 900.50288029264 900.50178993586 41.073 2 0.14283781898655498 0.0010268205528401856 0.9438714419765777 ['ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4'] 138964 11406 YSESSQLLY True H1975_Epitope_Rep1 1088.50260550912 1088.5015099358602 48.852 2 0.1428319862752405 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 17511 8330 EHINEGETAM[Oxidation]L True PC9_epitope_Rep4 1258.5499670881397 1258.54886993586 39.499 2 0.1428177508769784 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 85828 16177 QMISRIEYV True PC9_epitope_Rep1 1137.58523001761 1137.5841299358601 67.039 2 0.142816905694236 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 49420 16848 KILQELPSV True PC9_epitope_Rep2 1025.6120963884498 1025.61098993586 70.053 2 0.14281494342296777 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 115637 21310 TVISLLTGL True PC9_epitope_Rep6 915.56408356687 915.5635349679301 94.822 1 0.14281428086061312 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 104983 9290 STIEYVIQR True NCI_RA007_Epitope_Rep2 1107.59242357303 1107.5913299358601 40.745 2 0.14280982178486243 0.0010268205528401856 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 138880 16509 YSDSFPMEL True H1975_Epitope_Rep2 1087.45321278855 1087.4526749679299 68.72 1 0.14280954575237403 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 65301 5338 LSEKPPYSKY True H1975_Epitope_Rep3 1210.6233893481399 1210.6217549037901 25.602 3 0.14280862781428888 0.0010268205528401856 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 104101 10110 SRVTNNVVL True PC9_epitope_Rep3 1000.56654317836 1000.56544993586 43.84 2 0.14280665538807957 0.0010268205528401856 0.9438714419765777 ['ENSG00000104147|ENST00000220514|OIP5'] 108947 5414 TETQPPAAP True H1975_Epitope_Rep3 910.4396113297398 910.43850993586 25.888 2 0.1427986589017403 0.0010268205528401856 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 48764 8483 KEQIDIYEA True H1975_Epitope_Rep2 1107.54480467427 1107.54370993586 37.582 2 0.14279471304280858 0.0010268205528401856 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 98392 22287 SIIDEFLHI True PC9_epitope_Rep4 1085.57571087973 1085.57460993586 93.965 2 0.14279068467326603 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 104926 6377 STFSTNYR True PC9_epitope_Rep2 974.4457593393399 974.44466993586 29.933 2 0.1427891626184327 0.0010268205528401856 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 132177 8104 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5287299358602 40.701 2 0.14277848381923183 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 52323 12165 KPANVFITA True PC9_epitope_Rep5 959.54401682863 959.54290993586 51.782 2 0.14277666922003335 0.0010268205528401856 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 22337 2731 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56219490379 14.574 3 0.142770788801128 0.0010268205528401856 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 54066 18615 KYLVIGDLLF True NCI_RA007_Epitope_Rep4 1179.69034670915 1179.68924993586 80.517 2 0.14276710405101162 0.0010268205528401856 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 114416 9346 TSDTLNNVGY True H1975_Epitope_Rep2 1082.48801807414 1082.4869299358602 40.91 2 0.1427661709539113 0.0010268205528401856 0.9438714419765777 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 20763 20926 EQLNGILLHL True PC9_epitope_Rep2 1148.65535818276 1148.6542699358602 85.938 2 0.14276444598286117 0.0010268205528401856 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 135200 22705 YAVELFEGL True PC9_epitope_Rep2 1039.5226126777097 1039.5215099358602 92.829 2 0.1427537248735321 0.0010268205528401856 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1'] 116478 22794 TYDEIFYTL True PC9_epitope_Rep5 1163.5386566646698 1163.5375499358602 92.668 2 0.14274875808218462 0.0010268205528401856 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF'] 60552 11577 LIQDRVAEV True PC9_epitope_Rep1 1041.5818588893299 1041.5807699358602 49.409 2 0.14274665204959125 0.0010268205528401856 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 87644 20549 QVADILFQTA True PC9_epitope_Rep4 1104.5815245361598 1104.5804299358601 87.193 2 0.1427396373241088 0.0010268205528401856 0.9438714419765777 ['ENSG00000114491|ENST00000232607|UMPS'] 114010 20887 TRLSNIFVI True PC9_epitope_Rep3 1061.62332977849 1061.62222993586 85.616 2 0.14273843290417215 0.0010268205528401856 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF'] 31905 6373 GEQPASYVS True H1975_Epitope_Rep3 936.41887588516 936.4183249679301 29.497 1 0.14273053374236017 0.0010268205528401856 0.9438714419765777 ['ENSG00000135334|ENST00000257787|AKIRIN2'] 134794 14575 WYKSKFANL True PC9_epitope_Rep5 1155.6076797143498 1155.60658993586 61.063 2 0.1427292751209517 0.0010268205528401856 0.9438714419765777 ['ENSG00000148798|ENST00000369849|INA'] 12328 19279 DIVAINDPFI True H1975_Epitope_Rep3 1115.58627556343 1115.5851699358602 80.83 2 0.14272872105825296 0.0010268205528401856 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF', 'ENST00000438477.2_1_1:120039232-120039448:-|nuORF', 'ENST00000423411.2_1_6:135941072-135941228:-|nuORF'] 74028 9690 NHSDYNM[Oxidation]VL True PC9_epitope_Rep5 1107.46550918819 1107.4644099358602 42.24 2 0.14272830363030972 0.0010268205528401856 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 53690 20765 KYAMMFAEL True PC9_epitope_Rep3 1102.51912460374 1102.51802993586 85.143 2 0.14272598278314844 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 59317 3502 LGIHEDSTNR True NCI_RA007_Epitope_Rep4 1140.5523496662001 1140.5506949037901 19.44 3 0.1427247738397782 0.0010268205528401856 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 110056 18094 THYDHVLIEL True PC9_epitope_Rep5 1238.6295373577398 1238.62789490379 74.61 3 0.14272271723199684 0.0010268205528401856 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 67814 20802 LTIDDGIFEV True PC9_epitope_Rep6 1120.56520576568 1120.56467496793 92.784 1 0.14271811090055878 0.0010268205528401856 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 114869 10647 TTDPYLTNSY True H1975_Epitope_Rep2 1173.5189838492502 1173.51788993586 45.977 2 0.14270761807273852 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000182022|Q7LFX5-2|CHST15', 'ENSG00000182022|ENST00000435907|CHST15'] 63965 10261 LQAEIEGLK True PC9_epitope_Rep6 999.5600608155898 999.55896993586 50.146 2 0.1427035920339239 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__H-INV:HIT000292931'] 104977 22916 STIDILYQL True PC9_epitope_Rep1 1064.57537652656 1064.57426993586 92.944 2 0.14270348099287036 0.0010268205528401856 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 67932 15177 LTLGKLEQV True PC9_epitope_Rep4 999.5964463243098 999.59534993586 66.304 2 0.14270110605344116 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 72145 20928 M[Oxidation]RFLAATFL True PC9_epitope_Rep1 1084.57393743836 1084.57282993586 85.32 2 0.14269829253999566 0.0010268205528401856 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 101659 20990 SPFQFTVGP True PC9_epitope_Rep2 978.4810822188999 978.48053496793 86.189 1 0.1426845090986772 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 87031 7652 QSDKVYEVY True H1975_Epitope_Rep2 1129.52915461013 1129.52804993586 34.387 2 0.14268068413582582 0.0010268205528401856 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4', 'ENST00000456901.1_1_7:145280818-145281352:+|nuORF'] 35649 5951 GTMKAQGVLLK True NCI_RA007_Epitope_Rep4 1144.6638146914797 1144.66216490379 29.51 3 0.14267812800532606 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000166482|P55083-2|MFAP4'] 31318 11828 GEAEAFAIGA True H1975_Epitope_Rep3 934.4396113297398 934.4390649679301 50.641 1 0.14267656182031146 0.0010268205528401856 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 102902 17871 SQIEADFRL True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 74.043 2 0.1426732293687878 0.0010268205528401856 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 91652 16816 RPFQSELFA True PC9_epitope_Rep5 1093.55564414149 1093.5545499358602 69.691 2 0.1426714841155738 0.0010268205528401856 0.9438714419765777 ['ENST00000488504.5_1_22:50695267-50699938:-|nuORF', 'nc|ENSG00000188130|P53778-2|MAPK12', 'ENSG00000188130|ENST00000215659|MAPK12'] 139362 9368 YTDTYTEAY True H1975_Epitope_Rep2 1125.4502355830898 1125.44967496793 40.995 1 0.14266887758756588 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 105537 3313 SVDPKNYPK True NCI_RA007_Epitope_Rep4 1046.53965972418 1046.53856993586 18.478 2 0.14266741355352727 0.0010268205528401856 0.9438714419765777 ['ENST00000491056.5_1_2:113587940-113590763:-|nuORF', 'ENSG00000125538|ENST00000263341|IL1B'] 86828 13783 QRPPTIVL True PC9_epitope_Rep5 922.5600012459399 922.55890993586 58.035 2 0.14266238898059475 0.0010268205528401856 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 47365 10633 IYIAGHPAF True NCI_RA007_Epitope_Rep4 987.51780208079 987.51670993586 47.747 2 0.14265732207339157 0.0010268205528401856 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 5958 9287 APITGQVSA True PC9_epitope_Rep1 842.4497820906199 842.44923496793 40.577 1 0.14265137399069308 0.0010268205528401856 0.9438714419765777 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 3872 15488 AHDDAIWSV True PC9_epitope_Rep4 1012.46140940348 1012.46030993586 67.503 2 0.1426510134870477 0.0010268205528401856 0.9438714419765777 ['ENSG00000140395|ENST00000267973|SKIC8', 'ENST00000559700.5_1_15:78584919-78588040:-|nuORF'] 92132 5510 RQAELAQWQK True NCI_RA007_Epitope_Rep4 1256.6625688215197 1256.66092490379 27.786 3 0.14264133519681124 0.0010268205528401856 0.9438714419765777 ['ENSG00000183978|ENST00000328434|COA3'] 7035 10773 AQSKGIYYV True PC9_epitope_Rep1 1027.53384606775 1027.53274993586 46.326 2 0.14263828469516845 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 135730 6429 YEKEGEFVA True H1975_Epitope_Rep2 1070.4920408254197 1070.49147496793 29.649 1 0.14263742098769092 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 138254 9778 YQVAAAESHPL True PC9_epitope_Rep4 1184.5825871653199 1184.5814899358602 45.251 2 0.14263284222930084 0.0010268205528401856 0.9438714419765777 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 54163 19486 KYNLINEYF True PC9_epitope_Rep4 1202.5971746003 1202.5960699358602 83.069 2 0.14262793525564832 0.0010268205528401856 0.9438714419765777 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1'] 31554 9908 GEFQSFSSA True NCI_RA007_Epitope_Rep3 958.4032258210199 958.40267496793 46.055 1 0.14262483661782768 0.0010268205528401856 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 93450 6566 RSDPTSYAGY True H1975_Epitope_Rep2 1115.4883524273098 1115.48724993586 30.167 2 0.14262478406261053 0.0010268205528401856 0.9438714419765777 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 91111 11139 RLMNDMTAV True PC9_epitope_Rep6 1049.49978614149 1049.49868993586 53.793 2 0.14261655078785265 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 76807 10974 NVELDPEIQ True NCI_RA007_Epitope_Rep5 1055.51350454599 1055.5124099358602 48.848 2 0.14261651396270797 0.0010504626075714112 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 8438 4095 ATSDMDIGK True NCI_RA007_Epitope_Rep3 936.4222470134399 936.42114993586 22.634 2 0.14261577604106546 0.0010504626075714112 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1'] 17196 14830 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 62.307 2 0.1426156369303731 0.0010504626075714112 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 87405 12768 QTDQMVFNAY True H1975_Epitope_Rep1 1215.52302368387 1215.52192993586 54.173 2 0.14261386173285365 0.0010504626075714112 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 56956 4670 LEDVSKPPA True H1975_Epitope_Rep2 954.5022115863 954.50110993586 23.059 2 0.14261096400912984 0.0010504626075714112 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 74242 14690 NIDPITMAY True H1975_Epitope_Rep3 1036.48993265044 1036.4888299358602 61.877 2 0.14260638007156815 0.0010504626075714112 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 43636 12962 IILDEAHNV True PC9_epitope_Rep5 1022.53965972418 1022.53856993586 54.867 2 0.14260524585680212 0.0010504626075714112 0.9438714419765777 ['ENSG00000116830|ENST00000369466|TTF2'] 76637 8930 NTIDPSHPM True PC9_epitope_Rep5 1010.4491304676201 1010.44802993586 39.294 2 0.1426051678523284 0.0010504626075714112 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 88941 7473 REDENLQVP True H1975_Epitope_Rep2 1098.53055159246 1098.5294499358602 33.692 2 0.14259755407875907 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF'] 128359 6208 VSDPSSPQY True H1975_Epitope_Rep2 978.42944056886 978.42834993586 28.849 2 0.14258533484710426 0.0010504626075714112 0.9438714419765777 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 85417 12894 QLEQDVLSY True H1975_Epitope_Rep2 1093.5291546101298 1093.52804993586 54.709 2 0.1425779950133171 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF', 'CDK5RAP2|p.M736*|1|0.22|ENSG00000136861|chr9:120458619-120458619|T/-|frameshift_variant'] 138251 10995 YQVAAAESHPL True PC9_epitope_Rep1 1184.5825871653199 1184.5814899358602 47.181 2 0.14255915222445387 0.0010504626075714112 0.9438714419765777 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 83778 13872 QEEGYIIAV True H1975_Epitope_Rep3 1020.5127762699998 1020.51227496793 58.667 1 0.1425568901555462 0.0010504626075714112 0.9438714419765777 ['ENSG00000155903|ENST00000286364|RASA2', 'nc|ENSG00000155903|Q15283|RASA2'] 77198 12902 NYGRVFSEW True NCI_RA007_Epitope_Rep1 1156.53015766964 1156.5290699358602 54.177 2 0.14255053593976588 0.0010504626075714112 0.9438714419765777 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 20615 7501 EQEVNILK True NCI_RA007_Epitope_Rep2 971.5287606873098 971.52766993586 33.803 2 0.14254960143774545 0.0010504626075714112 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 96176 13345 SEEFPSFGA True H1975_Epitope_Rep3 969.4079768482899 969.40686993586 56.594 2 0.14254645169692534 0.0010504626075714112 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 8795 19017 AVFDKTLAEL True PC9_epitope_Rep4 1105.60192562757 1105.60082993586 81.239 2 0.14254456904426618 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 98425 21339 SIIQRLLEV True PC9_epitope_Rep2 1069.64954452633 1069.64844993586 87.547 2 0.14254290905559477 0.0010504626075714112 0.9438714419765777 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 87717 19006 QVEEELFSV True PC9_epitope_Rep6 1078.51825557326 1078.51714993586 85.75 2 0.1425355320731021 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 74595 13486 NLDPLTETY True H1975_Epitope_Rep3 1064.50260550912 1064.50207496793 57.15 1 0.1425347004800507 0.0010504626075714112 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 135513 13927 YEDSGIPLP True H1975_Epitope_Rep3 989.4705771048499 989.47002496793 58.884 1 0.14253401787182593 0.0010504626075714112 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 86177 20624 QPSSLLPLA True PC9_epitope_Rep3 924.5280324113199 924.52748496793 84.6 1 0.14253253537605354 0.0010504626075714112 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 92187 19684 RQFSTPFQL True PC9_epitope_Rep5 1122.5821932425 1122.58108993586 80.768 2 0.142526184269614 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 112991 13838 TPSPLPTV True PC9_epitope_Rep6 810.4487194614601 810.44762993586 65.037 2 0.14252275214799834 0.0010504626075714112 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 21163 12321 ERDYTYEEL True PC9_epitope_Rep4 1216.5247975056798 1216.52370993586 55.203 2 0.14252079005693497 0.0010504626075714112 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 37927 8030 HEEEGILVA True H1975_Epitope_Rep3 995.4923751785898 995.49126993586 35.86 2 0.14252074429457387 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4'] 132536 19380 VYPGDPLRF True PC9_epitope_Rep5 1062.5498304850598 1062.5487299358601 79.591 2 0.14251857097543053 0.0010504626075714112 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 76080 15479 NRMDYYNAL True PC9_epitope_Rep3 1158.51279335334 1158.5116899358602 64.691 2 0.14251548857981436 0.0010504626075714112 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 103312 21634 SQVAVAGLLTV True PC9_epitope_Rep1 1056.6179100448799 1056.6168099358601 88.041 2 0.14250861001077045 0.0010504626075714112 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 114368 9087 TSDETTLEY True H1975_Epitope_Rep3 1057.44515020265 1057.4445749679298 39.941 1 0.14250629185228575 0.0010504626075714112 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 93679 13326 RTITVGVYEA True PC9_epitope_Rep5 1107.5924235730297 1107.5913299358601 56.271 2 0.14250306249033937 0.0010504626075714112 0.9438714419765777 ['ENSG00000116717|ENST00000370986|GADD45A', 'ENST00000460575.1_1_1:68151090-68151810:+|nuORF'] 7981 4201 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 21.267 2 0.14250142445509084 0.0010504626075714112 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 9048 20044 AVIPRLVQL True PC9_epitope_Rep3 1007.64915060351 1007.64804993586 82.349 2 0.14250116345871458 0.0010504626075714112 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 37751 12072 HAVGDIPGV True PC9_epitope_Rep5 863.45011644379 863.44900993586 51.429 2 0.14249945095450045 0.0010504626075714112 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 34495 8196 GQDVGRYQV True PC9_epitope_Rep1 1020.49885754136 1020.49776993586 36.359 2 0.1424913082648255 0.0010504626075714112 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 43776 23008 IIYPGAFVDL True PC9_epitope_Rep5 1106.60119735158 1106.60010993586 93.491 2 0.14248793750650693 0.0010504626075714112 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 5162 8870 ALPDQGIAKA True PC9_epitope_Rep1 982.5447451046199 982.54364993586 38.958 2 0.1424846554460603 0.0010504626075714112 0.9438714419765777 ['ENSG00000089289|ENST00000356413|IGBP1'] 47382 14718 IYIGGQEHF True PC9_epitope_Rep1 1062.5134449763398 1062.5123499358601 61.434 2 0.1424725457021455 0.0010504626075714112 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 92194 5286 RQGNMTAAL True NCI_RA007_Epitope_Rep3 960.4810993022398 960.48000993586 27.802 2 0.14247034143412105 0.0010504626075714112 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5'] 110015 11130 THTTPVLL True PC9_epitope_Rep2 880.5018176634799 880.50072993586 48.135 2 0.14246505388262234 0.0010504626075714112 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 76746 20028 NTTDIFQTV True PC9_epitope_Rep2 1037.50293986229 1037.5023749679299 82.441 1 0.14246297220182177 0.0010504626075714112 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 87179 20027 QSLEYLEQV True PC9_epitope_Rep3 1107.54480467427 1107.54370993586 82.283 2 0.14246064723050372 0.0010504626075714112 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 138824 8570 YSDKYGLGY True H1975_Epitope_Rep1 1064.48147614172 1064.4803699358602 37.891 2 0.14245584195763328 0.0010504626075714112 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 16217 8144 EEFQFIKKA True NCI_RA007_Epitope_Rep4 1138.60225998074 1138.60060490379 38.115 3 0.1424555040269919 0.0010504626075714112 0.9438714419765777 ['ENSG00000140259|ENST00000267812|MFAP1'] 32661 5587 GHLKVVQSL True NCI_RA007_Epitope_Rep3 979.5814649665099 979.58036993586 28.969 2 0.1424554749001255 0.0010504626075714112 0.9438714419765777 ['ENSG00000145780|ENST00000274457|FEM1C'] 106322 6712 SVSAVNLPK True NCI_RA007_Epitope_Rep4 913.5232813840499 913.52218993586 32.442 2 0.14244862527451663 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1'] 6283 5790 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 27.088 2 0.14243413613822234 0.0010504626075714112 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 94679 11329 RYLEKPMEI True PC9_epitope_Rep2 1177.6165301458898 1177.6154299358602 48.898 2 0.14243001453736365 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 105908 5238 SVLDKSLTK True NCI_RA007_Epitope_Rep4 989.57571087973 989.5746099358599 26.687 2 0.14242367923615043 0.0010504626075714112 0.9438714419765777 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ', 'HELZ|p.T789Yfs*7|1|0.19|ENSG00000198265|chr17:67149977-67149978|-/A|frameshift_variant', 'ENST00000578938.1_1_17:65172688-65184471:-|nuORF', 'HELZ|p.R510Pfs*18|1|0.1|ENSG00000198265|chr17:67167698-67167698|C/-|frameshift_variant'] 138398 7077 YRDPTTVTT True PC9_epitope_Rep1 1052.51383889916 1052.51274993586 32.029 2 0.142422562266205 0.0010504626075714112 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 120019 21191 VFDPKVFTF True PC9_epitope_Rep5 1098.57498260374 1098.57388993586 86.558 2 0.14242183571409103 0.0010504626075714112 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 52872 9352 KRFDDKYTL True PC9_epitope_Rep1 1184.6189726740397 1184.61733490379 40.829 3 0.1424114433198292 0.0010504626075714112 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 127548 19263 VQVPVPVTV True PC9_epitope_Rep4 936.5644179200399 936.56332993586 82.198 2 0.14241033925674118 0.0010504626075714112 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 9016 14513 AVIEAEKIAQV True PC9_epitope_Rep2 1169.66558851329 1169.66448993586 61.094 2 0.14240682300289503 0.0010504626075714112 0.9438714419765777 ['ENSG00000107566|ENST00000421367|ERLIN1'] 24217 11193 EYVKQTWNL True NCI_RA007_Epitope_Rep1 1179.59242357303 1179.5913299358601 47.538 2 0.14240243256466126 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 48660 2859 KELEKTYSA True H1975_Epitope_Rep1 1067.54989005471 1067.5487899358602 14.604 2 0.14240032094894128 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 114365 9125 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4445749679298 40.051 1 0.1423967362725742 0.0010504626075714112 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 90717 5693 RKPDGTVLL True NCI_RA007_Epitope_Rep3 997.59202965021 997.59092993586 29.373 2 0.14238538240070212 0.0010504626075714112 0.9438714419765777 ['ENSG00000066056|ENST00000372476|TIE1'] 31872 5379 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 25.727 2 0.14237706109167653 0.0010504626075714112 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 19473 8237 ELQEIQLK True H1975_Epitope_Rep3 999.56006081559 999.55896993586 36.667 2 0.14237370084320844 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 103901 22111 SRLTLLTLL True PC9_epitope_Rep5 1028.65938093404 1028.65828993586 90.084 2 0.14237049531637372 0.0010504626075714112 0.9438714419765777 ['ENSG00000149131|ENST00000278407|SERPING1', 'nc|ENSG00000149131|P05155-3|SERPING1'] 27737 20282 FQDQQILTL True PC9_epitope_Rep4 1104.58152453616 1104.58097496793 86.158 1 0.1423669424256097 0.0010504626075714112 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 31660 10164 GEHTLLVTV True NCI_RA007_Epitope_Rep5 967.5338460677499 967.53274993586 45.73 2 0.14236435566958622 0.0010504626075714112 0.9438714419765777 ['ENST00000441173.1_1_7:99751392-99751584:+|nuORF', 'ENSG00000188186|ENST00000341942|LAMTOR4'] 112986 15747 TPSPLPTV True PC9_epitope_Rep3 810.4487194614601 810.44762993586 65.728 2 0.14236337359591797 0.0010504626075714112 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 132935 20067 VYTVVDEM[Oxidation]F True PC9_epitope_Rep3 1117.50016336141 1117.49906993586 82.437 2 0.1423566912151415 0.0010504626075714112 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 69898 6531 LYDATYETK True NCI_RA007_Epitope_Rep1 1102.5182555732601 1102.51714993586 29.418 2 0.14235549783336218 0.0010504626075714112 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 54133 18005 KYNANFVTF True PC9_epitope_Rep1 1102.54474510462 1102.54364993586 74.049 2 0.1423511864353024 0.0010504626075714112 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 109788 4484 THISSQNSEL True PC9_epitope_Rep4 1114.52546621202 1114.52436993586 23.719 2 0.1423505492091749 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 63964 12048 LQAEIEGLK True PC9_epitope_Rep5 999.5600608155898 999.55896993586 51.336 2 0.14234959433675426 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__H-INV:HIT000292931'] 139361 9187 YTDTYTEAY True H1975_Epitope_Rep1 1125.4502355830898 1125.4491299358601 40.244 2 0.1423468905278346 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 18696 9362 ELDDTLKY True H1975_Epitope_Rep3 995.4811417885501 995.48004993586 41.011 2 0.1423381292837532 0.0010504626075714112 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000472253.1_1_5:133533465-133534901:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 34621 19159 GQIEVVPEV True PC9_epitope_Rep2 968.5178616504398 968.51676993586 79.068 2 0.14233782350743904 0.0010504626075714112 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 466 11867 AAMLDTVVFK True NCI_RA007_Epitope_Rep3 1093.58416738845 1093.58306993586 53.804 2 0.1423306111376751 0.0010504626075714112 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 95317 10217 SAFGVIIEK True NCI_RA007_Epitope_Rep5 962.54368247546 962.54258993586 45.931 2 0.1423226278373715 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 118213 15372 VAYEEFEKV True PC9_epitope_Rep3 1112.5389910178399 1112.5378899358602 64.284 2 0.14232241518358646 0.0010504626075714112 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 5207 17995 ALPSKLPTF True PC9_epitope_Rep2 972.56441792004 972.56332993586 74.521 2 0.14232063308516274 0.0010504626075714112 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 75906 7566 NRDRTQIAL True PC9_epitope_Rep5 1085.59415490853 1085.59304993586 34.05 2 0.14231923059805857 0.0010504626075714112 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 108503 6283 TEFPAKAVA True H1975_Epitope_Rep2 932.4967322830398 932.49562993586 29.111 2 0.14231810625775504 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000137203|P05549-5|TFAP2A', 'nc|ENSG00000137203|P05549-6|TFAP2A', 'nc|ENSG00000137203|P05549|TFAP2A', 'ENSG00000137203|ENST00000379613|TFAP2A'] 120290 14284 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 66.836 2 0.14231618362616233 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 60156 17847 LHYGLPVVV True PC9_epitope_Rep6 995.5804023373499 995.57930993586 81.278 2 0.14231337713941714 0.0010504626075714112 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 21010 19157 ERAPSLLSL True PC9_epitope_Rep3 984.5603951687599 984.55928993586 78.908 2 0.14230645925906338 0.0010504626075714112 0.9438714419765777 ['ENST00000548091.5_1_12:93965167-93966593:+|nuORF', 'ENST00000549122.5_1_12:93965649-93966593:+|nuORF', 'ENST00000547229.1_1_12:93966071-93966593:+|nuORF', 'ENST00000536696.6_1_12:93964876-93966593:+|nuORF'] 11930 17311 DHSIIETL True PC9_epitope_Rep5 926.47091145802 926.46980993586 71.589 2 0.14230359601550494 0.0010504626075714112 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 135231 9622 YAYDGKDYLA True NCI_RA007_Epitope_Rep1 1177.5291546101298 1177.52804993586 41.426 2 0.1423035189173149 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 12643 7656 DLEGLSQR True PC9_epitope_Rep6 916.46140940348 916.46030993586 38.771 2 0.1423023049035271 0.0010504626075714112 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 94583 6823 RYISQTQGL True NCI_RA007_Epitope_Rep4 1064.5614577979197 1064.56036993586 32.866 2 0.14230164064523038 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1', 'nc|ENSG00000064393|Q9H2X6-2|HIPK2', 'nc|ENSG00000064393|Q9H2X6-3|HIPK2', 'ENSG00000064393|ENST00000406875|HIPK2', 'nc|ENSG00000110422|Q9H422-2|HIPK3', 'ENSG00000110422|ENST00000303296|HIPK3'] 25221 9865 FEAPATINSA True H1975_Epitope_Rep3 1019.49237517859 1019.49126993586 42.975 2 0.1423004994872576 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 131294 21060 VVQPLLVSV True PC9_epitope_Rep3 952.5957180483199 952.59516496793 86.288 1 0.14229859983530918 0.0010504626075714112 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 35195 17969 GSDVVDWLY True H1975_Epitope_Rep2 1052.48147614172 1052.4803699358602 74.442 2 0.14229829062989266 0.0010504626075714112 0.9438714419765777 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'DVL3|p.H453Y|1|0.13|ENSG00000161202|chr3:184167924-184167924|C/T|missense_variant', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 17379 15758 EHFAALQSL True PC9_epitope_Rep4 1014.51344497634 1014.51234993586 68.536 2 0.142295462554765 0.0010504626075714112 0.9438714419765777 ['ENST00000526789.1_1_11:36300025-36310962:-|nuORF', 'ENST00000528608.5_1_11:36298627-36310962:-|nuORF', 'nc|ENSG00000110442|Q9P000-2|COMMD9', 'ENSG00000110442|ENST00000263401|COMMD9'] 62137 21881 LLPDYYLVTV True PC9_epitope_Rep4 1194.65362684726 1194.65252993586 92.377 2 0.14228546006439044 0.0010504626075714112 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 31550 10394 GEFQSFSSA True NCI_RA007_Epitope_Rep2 958.4032258210199 958.40267496793 45.021 1 0.14228343793136033 0.0010504626075714112 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 52316 12522 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54290993586 53.191 2 0.1422830118066722 0.0010504626075714112 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 35644 13977 GTMEWIMIK True NCI_RA007_Epitope_Rep4 1107.54567370475 1107.5445699358602 61.035 2 0.14227660117927146 0.0010504626075714112 0.9438714419765777 ['ENSG00000168273|ENST00000477703|UQCC5'] 20996 5721 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 27.396 2 0.14227486407251846 0.0010504626075714112 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 73273 5393 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 25.78 2 0.14227171729493135 0.0010504626075714112 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 105819 13984 SVIPQIQKV True PC9_epitope_Rep2 1010.6124307416198 1010.61132993586 59.062 2 0.1422701752319788 0.0010504626075714112 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 43025 10225 IGGGIDVPVPR True H1975_Epitope_Rep1 1078.61349337078 1078.6123899358602 44.273 2 0.14226929186342396 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP', 'KHSRP|p.V337Sfs*8|2|0.12|ENSG00000088247|chr19:6417811-6417811|C/-|frameshift_variant'] 8015 11538 ATDPVTGDLY True H1975_Epitope_Rep2 1050.48695544498 1050.48637496793 49.44 1 0.1422682601915587 0.0010504626075714112 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 123649 14844 VILPTVHEV True PC9_epitope_Rep4 1005.5858816406101 1005.58478993586 65.037 2 0.14226657525707595 0.0010504626075714112 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 21249 19200 ERIDGVSLL True PC9_epitope_Rep1 1000.5553097883198 1000.55420993586 78.648 2 0.14226206168944927 0.0010504626075714112 0.9438714419765777 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1'] 71139 19573 METVWTILP True H1975_Epitope_Rep3 1088.55761828744 1088.55652993586 82.008 2 0.14225777241625956 0.0010504626075714112 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 110935 15617 TLAVAAGLYY True H1975_Epitope_Rep2 1040.55424715916 1040.5531499358601 65.227 2 0.1422562131627243 0.0010504626075714112 0.9438714419765777 ['ENST00000489894.5_1_2:71216836-71221917:-|nuORF', 'ENSG00000144043|ENST00000272438|TEX261'] 73612 20935 NGFPVFATV True PC9_epitope_Rep4 950.48616759934 950.48506993586 88.686 2 0.14224962956233655 0.0010504626075714112 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 83754 7099 QEDSFSAEA True H1975_Epitope_Rep3 982.3879696797 982.3874249679301 32.276 1 0.14223626590974706 0.0010504626075714112 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 77200 12509 NYGRVFSEW True NCI_RA007_Epitope_Rep4 1156.53015766964 1156.5290699358602 55.131 2 0.14223606425277072 0.0010504626075714112 0.9438714419765777 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 134941 12348 YAEVGRVL True PC9_epitope_Rep3 905.4970666362099 905.49596993586 52.525 2 0.14223596782595213 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 120676 12639 VGAPKIPSV True PC9_epitope_Rep2 866.5225531080599 866.52144993586 53.925 2 0.1422338807209705 0.0010504626075714112 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 138681 15695 YRTDMIQAL True PC9_epitope_Rep4 1109.55392988933 1109.55282993586 68.296 2 0.14222409671867084 0.0010504626075714112 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 38927 14717 HIPDVITYL True H1975_Epitope_Rep3 1069.58079626017 1069.5796899358602 61.983 2 0.14222275434496315 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 136517 7829 YHNPTANSF True PC9_epitope_Rep2 1049.45665837621 1049.45556993586 35.484 2 0.14222088262432447 0.0010504626075714112 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 60079 19054 LHSLPIVSM True PC9_epitope_Rep5 995.54738795691 995.54628993586 78.319 2 0.1422207061318414 0.0010504626075714112 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 135916 11273 YETLTITQA True H1975_Epitope_Rep3 1038.5233409536997 1038.5222499358601 48.467 2 0.14221878276120786 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 86970 15857 QRVPLSVQL True PC9_epitope_Rep2 1038.61857875122 1038.61748993586 66.252 2 0.14220761106893454 0.0010504626075714112 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 9567 21329 AYANIISQF True PC9_epitope_Rep5 1025.5181960036098 1025.51767496793 87.098 1 0.14220718751304562 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 118785 16661 VEEAFVPVI True H1975_Epitope_Rep2 1001.5433481222899 1001.54224993586 69.321 2 0.1421974617703458 0.0010504626075714112 0.9438714419765777 ['ENSG00000090060|ENST00000216277|PAPOLA', 'nc|ENSG00000090060|P51003-2|PAPOLA', 'ENSG00000218823|ENST00000404991|PAPOLB'] 45859 11829 ISQIVSSITAS True NCI_RA007_Epitope_Rep1 1104.60265390356 1104.6020749679299 49.992 1 0.14218959202361162 0.0010504626075714112 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 6843 17505 AQIEDLQVKL True PC9_epitope_Rep4 1155.6499384491499 1155.6488499358602 75.337 2 0.14218719467502455 0.0010504626075714112 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 76570 6806 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 31.097 2 0.14218621160421696 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 105999 20010 SVLKSLVEI True PC9_epitope_Rep3 986.6011973515799 986.60010993586 82.216 2 0.142183466509311 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 28111 13845 FREGESVTVL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 58.537 2 0.14218302932271182 0.0010504626075714112 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 96223 4792 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 23.522 2 0.14217434204278634 0.0010504626075714112 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 105334 8385 STVNVILGK True NCI_RA007_Epitope_Rep4 929.5545815123298 929.55348993586 39.066 2 0.14217318641464943 0.0010504626075714112 0.9438714419765777 ['ADGRF5|p.W968Gfs*8|1|0.1|ENSG00000069122|chr6:46859002-46859002|C/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 36476 18160 GVISKTFQL True PC9_epitope_Rep5 991.57023157647 991.56912993586 74.861 2 0.14217070789749278 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 105543 7536 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4494699358602 33.938 2 0.14216393660417334 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 17164 15845 EHAEALLL True PC9_epitope_Rep3 894.4810822188999 894.47998993586 66.1 2 0.14216386450440888 0.0010504626075714112 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 132901 11731 VYTTNIQEL True NCI_RA007_Epitope_Rep4 1079.54989005471 1079.5487899358602 52.093 2 0.14216148259668474 0.0010504626075714112 0.9438714419765777 ['ENSG00000110031|ENST00000395074|LPXN', 'nc|ENSG00000110031|O60711-2|LPXN', 'ENST00000529915.1_1_11:58322280-58343350:-|nuORF'] 107338 5753 SYRQSSATSSF True NCI_RA007_Epitope_Rep1 1219.5469299325898 1219.5458299358602 26.434 2 0.14215821225606276 0.0010504626075714112 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 98743 6569 [Acetylation]-SIRVTQKSY True NCI_RA007_Epitope_Rep5 1122.6033229262 1122.6022299358601 31.93 2 0.14215352370454595 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 109772 12367 THISDTSVVL True PC9_epitope_Rep4 1070.56078909158 1070.5596899358602 55.376 2 0.14215085022848092 0.0010504626075714112 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 46649 13725 ITVEKIIKI True PC9_epitope_Rep6 1055.69543208959 1055.6943299358602 64.58 2 0.14214987096963722 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 7554 17288 ASFNDTFVHV True PC9_epitope_Rep4 1135.5298233164701 1135.5287299358602 74.501 2 0.14214938675653752 0.0010504626075714112 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 26720 16748 FLDGNELTL True NCI_RA007_Epitope_Rep1 1020.51277627 1020.51227496793 69.27 1 0.14214547268471123 0.0010504626075714112 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 29890 20540 FVYPLDFART True PC9_epitope_Rep2 1227.6288090817498 1227.6277099358601 84.44 2 0.14214536186827467 0.0010504626075714112 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant', 'SLC25A5|p.R140H|1|0.11|ENSG00000005022|chrX:119469968-119469968|G/A|missense_variant', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 83042 21895 PYLDSFYEY True PC9_epitope_Rep1 1195.5073565363898 1195.50624993586 89.032 2 0.1421442213820256 0.0010504626075714112 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 128402 10119 VSDTVVEPY True NCI_RA007_Epitope_Rep2 1007.4811417885498 1007.48057496793 43.948 1 0.14214243509687027 0.0010504626075714112 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 83715 5852 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 27.523 2 0.14213985568023382 0.0010504626075714112 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 10023 17124 AYTPFHAVL True PC9_epitope_Rep4 1017.5283667644899 1017.52726993586 73.87 2 0.14213051207201766 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 88508 9956 RADDTFEAL True NCI_RA007_Epitope_Rep2 1036.48253877088 1036.48197496793 43.353 1 0.14212861783843916 0.0010504626075714112 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 67803 22928 LTIDDGIFEV True PC9_epitope_Rep1 1120.56520576568 1120.56467496793 92.993 1 0.14212767509737662 0.0010504626075714112 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 95698 12494 SAYEFYHAL True NCI_RA007_Epitope_Rep1 1099.49746055903 1099.49636993586 52.578 2 0.14212486358010656 0.0010504626075714112 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 48180 19410 KAVELLVEL True PC9_epitope_Rep4 1012.6168474157198 1012.61574993586 82.771 2 0.14212395609396558 0.0010504626075714112 0.9438714419765777 ['ENSG00000100554|ENST00000216442|ATP6V1D'] 72735 19419 MYSFVNDKF True PC9_epitope_Rep3 1149.5164817514499 1149.5153899358602 79.92 2 0.14212340399067874 0.0010504626075714112 0.9438714419765777 ['ENSG00000163874|ENST00000373087|ZC3H12A', 'nc|ENSG00000102053|Q5HYM0-2|ZC3H12B', 'ENSG00000102053|ENST00000338957|ZC3H12B', 'ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 130422 11246 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 49.898 2 0.1421208081237114 0.0010504626075714112 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 129182 10577 VTDFPGFDER True H1975_Epitope_Rep1 1181.5353026197297 1181.5342099358602 45.638 2 0.14211935478974647 0.0010504626075714112 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 43246 12880 IHDFQPHVI True PC9_epitope_Rep5 1104.5716285588 1104.5705299358601 54.553 2 0.14211275464669643 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 113595 7250 TRAGPGTLSV True PC9_epitope_Rep6 957.52434401321 957.52324993586 37.014 2 0.14210680365326986 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 113221 20529 TQDTNTFFL True PC9_epitope_Rep4 1085.50293986229 1085.50184993586 87.116 2 0.14210228141674724 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 104249 9316 SSDPASQLSY True H1975_Epitope_Rep3 1053.46146897313 1053.4603699358602 40.829 2 0.14210197883193307 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 44873 5093 IQASTM[Oxidation]AFK True NCI_RA007_Epitope_Rep5 1011.50591744819 1011.50480993586 26.288 2 0.14208985169223115 0.0010504626075714112 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 100433 13552 SLPEELNRV True PC9_epitope_Rep2 1055.56112344475 1055.56002993586 57.42 2 0.14208600422650422 0.0010504626075714112 0.9438714419765777 ['ENSG00000137815|ENST00000389629|RTF1', 'NUSAP1-RTF1|1|fusion'] 41113 15427 HYMSINDSF True PC9_epitope_Rep2 1112.45969515132 1112.4585899358601 64.618 2 0.1420856987027499 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 25382 7331 FEIIDDHRA True H1975_Epitope_Rep2 1114.54072235334 1114.5396299358601 33.139 2 0.142079719815958 0.0010504626075714112 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000492525.1_1_8:29974982-29975219:-|nuORF', 'ENST00000406202.2_1_6:157297523-157298164:+|nuORF'] 74818 16573 NLPDEIYHV True PC9_epitope_Rep4 1098.5345743437401 1098.53346993586 71.724 2 0.1420793724474067 0.0010504626075714112 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 1767 11030 AEHGIFLPP True H1975_Epitope_Rep2 979.51271670035 979.51160993586 47.456 2 0.14207228286588716 0.0010504626075714112 0.9438714419765777 ['ENSG00000159079|ENST00000290155|CFAP298'] 38184 4490 HESDINAVA True NCI_RA007_Epitope_Rep4 954.4406739589 954.43956993586 23.655 2 0.142064113748596 0.0010504626075714112 0.9438714419765777 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 5363 12997 ALTGHLEEVVL True NCI_RA007_Epitope_Rep1 1179.6499384491499 1179.6488499358602 54.545 2 0.14206376194592996 0.0010504626075714112 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 36470 18283 GVISKTFQL True PC9_epitope_Rep1 991.57023157647 991.56912993586 75.115 2 0.14206102795972178 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 92144 8376 RQAPIPAEL True NCI_RA007_Epitope_Rep5 993.5607295219298 993.55962993586 38.892 2 0.14205948112307187 0.0010504626075714112 0.9438714419765777 ['ENSG00000169583|ENST00000494426|CLIC3'] 23219 7548 EVQLVESGG True NCI_RA007_Epitope_Rep3 916.4501760134399 916.44906993586 36.812 2 0.14205700315600017 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D', 'nc|ENSG00000211958|A0A0C4DH36|IGHV3-38', 'nc|ENSG00000211944|A0A0C4DH30|IGHV3-16', 'nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74', 'nc|ENSG00000211942|P01766|IGHV3-13', 'nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73', 'nc|ENSG00000211957|A0A0C4DH35|IGHV3-35', 'nc|ENSG00000211938|P01780|IGHV3-7'] 103483 5126 SRAPSVATV True PC9_epitope_Rep4 886.4872302285 886.48612993586 26.375 2 0.14205563744034286 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 110078 10573 TIAEGFVKA True PC9_epitope_Rep6 934.5123823471798 934.51128993586 51.477 2 0.14205542289199888 0.0010504626075714112 0.9438714419765777 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 139427 16132 YTELEAIMY True H1975_Epitope_Rep1 1131.5158130451098 1131.51527496793 67.395 1 0.14205253995661918 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 110654 16838 TIVNELVRV True PC9_epitope_Rep6 1041.61824439805 1041.6171499358602 77.282 2 0.14205161406713535 0.0010504626075714112 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 115758 20505 TVLQELINV True PC9_epitope_Rep6 1027.5913609438699 1027.59026993586 91.603 2 0.14205068399273738 0.0010504626075714112 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 75349 15329 NQAKYIPEL True PC9_epitope_Rep5 1074.57095985246 1074.5698699358602 63.974 2 0.1420499378984155 0.0010504626075714112 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 88238 19825 QYEEQFVTL True PC9_epitope_Rep4 1155.5448046742697 1155.54427496793 84.385 1 0.14204302394346055 0.0010504626075714112 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 7166 10922 ARDDTHYLL True PC9_epitope_Rep1 1102.54072235334 1102.5396299358601 46.897 2 0.14202431743012958 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 9967 21926 AYSEAIFEL True PC9_epitope_Rep2 1041.50187723313 1041.50137496793 89.814 1 0.14202306262626288 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP'] 113153 20109 TQDAVPLTL True PC9_epitope_Rep1 956.51786165044 956.51676993586 82.179 2 0.14202259833646694 0.0010504626075714112 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 102658 17705 SQDLVYETV True PC9_epitope_Rep3 1052.50260550912 1052.5015099358602 73.298 2 0.1420019138178112 0.0010504626075714112 0.9438714419765777 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 20664 10456 EQIAEFKEA True PC9_epitope_Rep1 1063.51858992643 1063.51748993586 45.106 2 0.14199890397630205 0.0010504626075714112 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'CALM1|p.T6I|2|0.38|ENSG00000198668|chr14:90400078-90400078|C/T|missense_variant'] 86691 15454 QRIDEFEAM True PC9_epitope_Rep5 1137.5124590001699 1137.51136993586 64.454 2 0.14198333622947212 0.0010504626075714112 0.9438714419765777 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 72508 13863 MVAPVTGNDV True PC9_epitope_Rep5 1001.48518162317 1001.48408993586 58.344 2 0.14198011333204535 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 4690 9697 ALDHAGYSGLY True H1975_Epitope_Rep2 1165.54038800017 1165.53928993586 42.282 2 0.1419790212728379 0.0010504626075714112 0.9438714419765777 ['ENSG00000107201|ENST00000379883|RIGI', 'ENST00000379868.5_1_9:32491415-32526182:-|nuORF'] 88276 20613 QYGEVANLL True PC9_epitope_Rep5 1005.5131106231698 1005.51200993586 84.336 2 0.1419760506335073 0.0010504626075714112 0.9438714419765777 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-3|VPS53', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 73965 13158 NHMPSSINL True PC9_epitope_Rep5 1011.48076494907 1011.47966993586 55.616 2 0.14197208811701956 0.0010504626075714112 0.9438714419765777 ['ZBTB33|p.H573Sfs*2|1|0.19|ENSG00000177485|chrX:120255129-120255130|-/T|frameshift_variant', 'ENSG00000177485|ENST00000557385|ZBTB33'] 54136 17024 KYNANFVTF True PC9_epitope_Rep2 1102.54474510462 1102.54364993586 70.734 2 0.1419639875557005 0.0010504626075714112 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 132592 13012 VYPPPHQVF True PC9_epitope_Rep3 1082.5549158654999 1082.55380993586 55.079 2 0.14195317866788768 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 39391 15546 HLVPEVPTV True PC9_epitope_Rep4 989.55458151233 989.55348993586 67.721 2 0.14194643233744825 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 77566 14985 NYSPYVNYF True NCI_RA007_Epitope_Rep4 1165.50802524273 1165.5069299358602 65.11 2 0.14194518509881418 0.0010504626075714112 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 138684 14866 YRTDMIQAL True PC9_epitope_Rep6 1109.55392988933 1109.55282993586 69.158 2 0.1419424472707218 0.0010504626075714112 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 107367 18015 SYSHIMALI True PC9_epitope_Rep6 1033.52665251233 1033.52554993586 81.921 2 0.14194063375256358 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 139642 14979 YTSDYFISY True H1975_Epitope_Rep3 1157.49170647225 1157.49117496793 63.004 1 0.14193911258595845 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 27738 20273 FQDQQILTL True PC9_epitope_Rep4 1104.58152453616 1104.5804299358601 86.122 2 0.14193336751755362 0.0010504626075714112 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 139676 22267 YTTDFIYQL True PC9_epitope_Rep5 1162.55464108198 1162.55354993586 90.657 2 0.1419298000104996 0.0010504626075714112 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 102837 20984 SQFQQEFPSL True PC9_epitope_Rep5 1209.5666027480097 1209.56550993586 85.776 2 0.14192667774479445 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 102935 20185 SQIISLQTL True PC9_epitope_Rep4 1001.5757108797301 1001.57517496793 85.779 1 0.1419261810807924 0.0010504626075714112 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 113396 19895 TQLGPPYHILV True PC9_epitope_Rep5 1236.68665831104 1236.68556993586 81.579 2 0.14191857985638492 0.0010504626075714112 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 66600 7340 LSSPATLNSR True PC9_epitope_Rep5 1044.5563724174801 1044.55526993586 33.193 2 0.14191489198626397 0.0010504626075714112 0.9438714419765777 ['CON__P00761'] 29130 7722 FTTDLDSPR True NCI_RA007_Epitope_Rep1 1050.49818883502 1050.49708993586 34.029 2 0.14191340693034699 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 110161 7168 TIDDLEEK True PC9_epitope_Rep3 961.46040634397 961.45930993586 32.583 2 0.14191328650162108 0.0010504626075714112 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 86576 10475 QRDEKVLEL True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 45.181 2 0.14190371063400392 0.0010504626075714112 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 70914 18823 [Acetylation]-M[Oxidation]ELITILEK True H1975_Epitope_Rep3 1146.62061316356 1146.6195099358602 78.948 2 0.1419032272365913 0.0010504626075714112 0.9438714419765777 ['ENSG00000108424|ENST00000290158|KPNB1'] 17699 16921 EHSLPTLGL True PC9_epitope_Rep4 965.51819600361 965.5176449679301 73.074 1 0.14189656143222104 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 8932 9165 AVGLVLPAK True NCI_RA007_Epitope_Rep4 866.5589386167799 866.55784993586 42.094 2 0.1418922671519863 0.0010504626075714112 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 103750 18431 SRFGKYFEI True PC9_epitope_Rep5 1145.58694426977 1145.58584993586 75.915 2 0.14189085150314198 0.0010504626075714112 0.9438714419765777 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'MYO1F|p.A217Pfs*12|1|0.18|ENSG00000142347|chr19:8551862-8551862|C/-|frameshift_variant', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 115457 9125 TVFSHAQTV True PC9_epitope_Rep1 988.4977949121999 988.49668993586 39.951 2 0.14188878822859477 0.0010504626075714112 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 41009 18325 HYGLPVVV True PC9_epitope_Rep1 882.49633836022 882.49524993586 75.276 2 0.14188336450705236 0.0010504626075714112 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 99613 18208 SLFPGKLEVV True PC9_epitope_Rep6 1087.62774645259 1087.62664993586 82.678 2 0.14187965463183436 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 91878 12477 RPNSLVGITSA True PC9_epitope_Rep3 1113.61422164677 1113.6131299358601 53.019 2 0.1418795027985797 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 109212 17782 TFTFSHATF True PC9_epitope_Rep2 1057.4868958753298 1057.48578993586 73.688 2 0.14187895062647715 0.0010504626075714112 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 6200 10147 APQVLVLAPTR True H1975_Epitope_Rep1 1163.70264272835 1163.7015499358602 43.969 2 0.14187775496973926 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 76802 11287 NVELDPEIQ True NCI_RA007_Epitope_Rep2 1055.51350454599 1055.51297496793 48.492 1 0.1418763853864711 0.0010504626075714112 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 47114 17973 IVWQEDPRL True PC9_epitope_Rep3 1154.6084079903396 1154.60730993586 74.337 2 0.14187291924442436 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 1835 12122 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.4856749679301 51.795 1 0.14187200273733241 0.0010504626075714112 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 131819 21800 VYAPPVGGFSF True PC9_epitope_Rep2 1139.56514619603 1139.56404993586 89.326 2 0.1418643832478026 0.0010504626075714112 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 116845 17850 TYMKDLYQL True PC9_epitope_Rep4 1173.5739966275698 1173.57288993586 76.697 2 0.141863364477385 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 29227 14455 FVDDYTVRV True PC9_epitope_Rep6 1112.55022440788 1112.54912993586 67.489 2 0.14186016043664398 0.0010504626075714112 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 92331 5464 RQNKLTYTM True NCI_RA007_Epitope_Rep4 1153.59137802721 1153.59028993586 27.6 2 0.14185971820447577 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 45055 17963 IQPDNIVYV True PC9_epitope_Rep6 1059.56006081559 1059.5589699358602 81.723 2 0.14185915543915179 0.0010504626075714112 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 132952 19648 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep6 1230.58422733854 1230.5831299358601 88.234 2 0.14185746098340726 0.0010504626075714112 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 65357 12472 LSEPEEAAALY True H1975_Epitope_Rep1 1191.5659340416698 1191.56537496793 53.012 1 0.1418573983300928 0.0010504626075714112 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant'] 16443 11915 EELNADLFR True NCI_RA007_Epitope_Rep1 1105.5403880001697 1105.53928993586 50.331 2 0.14185608657847568 0.0010504626075714112 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2'] 61959 21619 LLLPDYYLVTV True PC9_epitope_Rep6 1307.73769082439 1307.7365899358601 96.037 2 0.14185605726197584 0.0010504626075714112 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 76342 12312 NSELSCQLY True H1975_Epitope_Rep2 1055.4593607981499 1055.45826993586 52.442 2 0.14185459140050483 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 99573 19089 SLFGGSVKL True PC9_epitope_Rep5 906.51746772762 906.51636993586 78.456 2 0.14185394411438523 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000477798.5_1_3:33840175-33866683:+|nuORF'] 75682 15735 NQTPVTLQV True PC9_epitope_Rep4 998.5396597241801 998.53911496793 68.449 1 0.14185377279917324 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 69042 19205 LVIDAVREI True PC9_epitope_Rep5 1026.6073453611798 1026.6062499358602 78.911 2 0.1418508752033108 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 46185 8657 ITDHGSLIY True H1975_Epitope_Rep3 1017.51311062317 1017.51200993586 38.295 2 0.14184609624616246 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 88328 8722 QYLPHVARL True NCI_RA007_Epitope_Rep4 1095.61891310439 1095.6178099358601 40.341 2 0.14184217735145058 0.0010504626075714112 0.9438714419765777 ['ENSG00000148248|ENST00000371989|SURF4', 'ENST00000467910.5_1_9:136231851-136242840:-|nuORF', 'nc|ENSG00000148248|O15260-3|SURF4', 'nc|ENSG00000148248|O15260-2|SURF4'] 537 4376 AAQDSTDLVAK True NCI_RA007_Epitope_Rep5 1117.5615173675699 1117.5604299358602 23.451 2 0.141828661162212 0.0010504626075714112 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 25821 7095 FGEEAEEEA True H1975_Epitope_Rep3 1009.3876353265298 1009.3870749679301 32.26 1 0.1418192053474584 0.0010504626075714112 0.9438714419765777 ['ENSG00000196230|ENST00000327892|TUBB', 'ENST00000427668.1_1_1:53461605-53461695:+|nuORF'] 841 11072 [Acetylation]-ADFDTYDDR True H1975_Epitope_Rep3 1158.4465475012798 1158.44544993586 47.68 2 0.1418147246599685 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H', 'ENST00000479338.5_1_7:73588713-73604094:+|nuORF', 'EIF4H|p.T100Ifs*23|1|0.1|ENSG00000106682|chr7:74189723-74189724|AC/-|frameshift_variant', 'ENST00000489484.5_1_7:73588713-73604262:+|nuORF'] 114078 8689 TRQTGIVL True PC9_epitope_Rep4 886.5236157372198 886.52250993586 40.913 2 0.1418145356359659 0.0010504626075714112 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 113520 11133 TQTAVITRI True PC9_epitope_Rep5 1001.5869442697699 1001.58584993586 47.808 2 0.1418130837222877 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 124284 15763 VLDELTLAR True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 65.899 2 0.14180764699278967 0.0010504626075714112 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16723272-16723344:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 120161 11815 VFLENVIR True NCI_RA007_Epitope_Rep5 988.5705659296399 988.56946993586 52.103 2 0.14180373657683734 0.0010504626075714112 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 64974 6782 LSDDHGASWRY True H1975_Epitope_Rep2 1305.5738133867699 1305.57270993586 31.003 2 0.1418032684877276 0.0010504626075714112 0.9438714419765777 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 26037 19880 FHDHALMIIF True PC9_epitope_Rep4 1242.6219498795 1242.6208499358602 84.6 2 0.14180102142613743 0.0010504626075714112 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 3989 20159 AHFPINVVI True PC9_epitope_Rep2 1008.5756513100799 1008.57507496793 82.955 1 0.1418005299119243 0.0010504626075714112 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 140418 12855 YYFEGIKQTF True NCI_RA007_Epitope_Rep3 1294.6233893481397 1294.6222899358602 57.824 2 0.14179711729679 0.0010504626075714112 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 62134 13384 LLPDNVHYV True PC9_epitope_Rep6 1068.5603951687601 1068.55928993586 63.152 2 0.14179660691901635 0.0010504626075714112 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 84651 14743 QHEEFVTSL True PC9_epitope_Rep5 1088.51383889916 1088.5132749679299 61.708 1 0.141795394637135 0.0010504626075714112 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 104450 4211 SSLNHIVEK True NCI_RA007_Epitope_Rep4 1025.5505587610498 1025.54946993586 22.508 2 0.14179374128713512 0.0010504626075714112 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'ENST00000491790.1_1_1:153733326-153733395:+|nuORF'] 21154 18959 ERDTYMLLL True PC9_epitope_Rep6 1152.58489566444 1152.58378993586 85.572 2 0.1417909937592308 0.0010504626075714112 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 89316 9005 RELVKNWVP True NCI_RA007_Epitope_Rep1 1139.64512785223 1139.64402993586 39.031 2 0.14178047954989265 0.0010504626075714112 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 102210 7047 SPSPPFGHSA True PC9_epitope_Rep2 982.4508447197801 982.44974993586 32.505 2 0.1417724252942467 0.0010504626075714112 0.9438714419765777 ['ENSG00000141232|ENST00000499247|TOB1'] 139523 20244 YTLDGGDIINA True PC9_epitope_Rep1 1150.5506183307 1150.55007496793 82.695 1 0.14176229589763772 0.0010504626075714112 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 1025 8483 AEAFGKIVA True H1975_Epitope_Rep1 904.5018176634799 904.50072993586 37.559 2 0.1417607728641009 0.0010504626075714112 0.9438714419765777 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 47939 18977 IYYVDVQKF True PC9_epitope_Rep2 1173.6070110080097 1173.6059099358602 78.361 2 0.1417442618310109 0.0010504626075714112 0.9438714419765777 ['ENSG00000160410|ENST00000291842|SHKBP1'] 109631 15849 THDITTISI True PC9_epitope_Rep3 999.52367530687 999.52256993586 66.115 2 0.14174390475118667 0.0010504626075714112 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 96780 6831 SEQVTRWAA True H1975_Epitope_Rep2 1046.5145076054998 1046.5134099358602 31.195 2 0.14174227021591843 0.0010504626075714112 0.9438714419765777 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF', 'ENST00000487266.1_1_21:27107719-27124637:+|nuORF'] 9422 21697 AVVPGLLEV True PC9_epitope_Rep3 895.5378688190299 895.53676993586 88.749 2 0.14173989404621848 0.0010504626075714112 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 27972 18872 FQSSAVMAL True PC9_epitope_Rep4 952.4688032830398 952.46770993586 80.677 2 0.1417396921290224 0.0010504626075714112 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 128371 13546 VSDPVGVLY True H1975_Epitope_Rep2 947.49639792987 947.49530993586 57.241 2 0.1417367317577683 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 44523 11534 IPAGTVTVNAA True PC9_epitope_Rep4 1012.55530978832 1012.55420993586 52.128 2 0.14173500375087456 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 27704 11801 FQDKNHLYL True PC9_epitope_Rep5 1176.5927579262 1176.5916699358602 50.389 2 0.14173417955661166 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 13764 7960 DQNIFVQK True NCI_RA007_Epitope_Rep1 990.5134449763399 990.51234993586 34.956 2 0.14173379475504788 0.0010504626075714112 0.9438714419765777 ['ENSG00000106605|ENST00000265523|BLVRA'] 8094 13056 ATELQSMMY True H1975_Epitope_Rep2 1072.45691827 1072.45582993586 55.342 2 0.14173129582997726 0.0010504626075714112 0.9438714419765777 ['ENSG00000196284|ENST00000371459|SUPT3H'] 76801 11529 NVELDPEIQ True NCI_RA007_Epitope_Rep1 1055.51350454599 1055.5124099358602 48.814 2 0.14172768081852255 0.0010504626075714112 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 95101 9431 RYTLQASTF True NCI_RA007_Epitope_Rep4 1085.5505587610498 1085.54946993586 43.135 2 0.1417214857648448 0.0010504626075714112 0.9438714419765777 ['ENSG00000055130|ENST00000325222|CUL1'] 127586 15272 VQYGNVPAV True PC9_epitope_Rep5 945.4919812557698 945.49088993586 63.753 2 0.14171701937889428 0.0010504626075714112 0.9438714419765777 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462', 'ENST00000497489.5_1_9:109691986-109693263:+|nuORF'] 8571 14857 AVADDFCKV True PC9_epitope_Rep1 966.44806783846 966.44696993586 61.968 2 0.14171149822980364 0.0010504626075714112 0.9438714419765777 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4', 'ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 23828 18780 EYLLKVNEI True PC9_epitope_Rep2 1119.61757569171 1119.61646993586 77.607 2 0.14170759435235866 0.0010504626075714112 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 26187 9967 FHSGDDSQVL True PC9_epitope_Rep3 1103.48835242731 1103.48724993586 43.295 2 0.14170551221821193 0.0010504626075714112 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3'] 12595 12754 DLDSRVLYY True H1975_Epitope_Rep2 1142.5607890915799 1142.56027496793 54.161 1 0.14170290949127845 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 54337 6309 KYQEVTNNL True NCI_RA007_Epitope_Rep5 1107.5560380643099 1107.5549499358601 30.946 2 0.14170250413516727 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 21145 9071 ERDSQTQAIL True PC9_epitope_Rep5 1159.5833154413099 1159.5822099358602 39.836 2 0.14170249007347027 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 26949 21049 FLIQHLPLV True PC9_epitope_Rep2 1078.65390163078 1078.6528099358602 86.419 2 0.1417002016248751 0.0010504626075714112 0.9438714419765777 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 95104 13281 RYTLQASTF True PC9_epitope_Rep2 1085.5505587610498 1085.54946993586 56.362 2 0.14169567245290324 0.0010504626075714112 0.9438714419765777 ['ENSG00000055130|ENST00000325222|CUL1'] 28706 19127 FSVDDVQTV True PC9_epitope_Rep3 1008.4763907612801 1008.47528993586 78.794 2 0.1416902853115537 0.0010504626075714112 0.9438714419765777 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 76260 8765 NSDLSEKLEY True H1975_Epitope_Rep2 1196.55609763396 1196.5550099358602 38.679 2 0.14168956938287983 0.0010504626075714112 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 40843 12504 HVLEEVQQV True PC9_epitope_Rep3 1079.56112344475 1079.56002993586 53.122 2 0.1416836827058425 0.0010504626075714112 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 131562 18352 VVVPTLDTV True PC9_epitope_Rep6 941.5433481222899 941.54224993586 83.233 2 0.14168191948786837 0.0010504626075714112 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 1852 9641 AEIEHFVDP True H1975_Epitope_Rep3 1055.49237517859 1055.4912699358601 42.1 2 0.14168173491913236 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 3866 17921 AHAYPAQWTL True PC9_epitope_Rep5 1156.5665431783598 1156.5654499358602 73.951 2 0.14168128630870516 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-12|MUC4', 'nc|ENSG00000145113|Q99102-13|MUC4'] 86194 8780 QPTSVLDKATA True PC9_epitope_Rep1 1129.59790287629 1129.5968099358602 38.613 2 0.14168095459968275 0.0010504626075714112 0.9438714419765777 ['DEPP1|p.R149Kfs*6|1|0.44|ENSG00000165507|chr10:44977585-44977586|-/T|frameshift_variant', 'ENSG00000165507|ENST00000298295|DEPP1'] 134942 10765 YAEVGRVL True PC9_epitope_Rep4 905.4970666362099 905.49596993586 49.166 2 0.14166702405056988 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 86999 19247 QRYNSFISL True PC9_epitope_Rep3 1126.5771078620598 1126.5760099358602 79.254 2 0.14166409128453616 0.0010504626075714112 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 23631 19902 EYFSYPVSL True PC9_epitope_Rep6 1103.51752729727 1103.51642993586 89.208 2 0.14165396654311785 0.0010504626075714112 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 6862 13735 AQIGSYVHV True PC9_epitope_Rep1 972.50288029264 972.50178993586 57.678 2 0.14163882328234545 0.0010504626075714112 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 136649 6468 YIDQEELNK True NCI_RA007_Epitope_Rep1 1150.5506183307 1150.5495299358602 29.179 2 0.14163628202221612 0.0010504626075714112 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 53248 16203 KTFSEILNRV True PC9_epitope_Rep1 1205.67682190333 1205.67572993586 67.142 2 0.14163169680077556 0.0010504626075714112 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 127051 17680 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 73.286 2 0.14162712847491418 0.0010504626075714112 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 32599 8747 GHDASQITL True PC9_epitope_Rep4 940.46140940348 940.46030993586 41.152 2 0.1416229486094869 0.0010504626075714112 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 101694 7931 SPGAPGPLTLK True H1975_Epitope_Rep1 1036.59169529704 1036.5905899358602 35.457 2 0.14162248226298707 0.0010504626075714112 0.9438714419765777 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX'] 91659 9905 RPFQSLIHA True PC9_epitope_Rep6 1067.58761297611 1067.58650993586 48.609 2 0.14161432186071715 0.0010504626075714112 0.9438714419765777 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 132854 22562 VYTPVDSLVF True PC9_epitope_Rep5 1138.5910265906998 1138.58992993586 91.788 2 0.14161400873150484 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'KDM2B|p.I399Mfs*82|1|0.34|ENSG00000089094|chr12:121510014-121510017|GTCT/-|frameshift_variant', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 108797 7038 TEQEVAQVASA True H1975_Epitope_Rep2 1131.54078192299 1131.53968993586 31.996 2 0.14160788693354526 0.0010504626075714112 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 34699 3746 GQLSVHTPK True NCI_RA007_Epitope_Rep4 965.5294293936499 965.52832993586 20.56 2 0.1416065689642814 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000285708|Q9H334-6|FOXP1', 'nc|ENSG00000285708|Q9H334-3|FOXP1', 'nc|ENSG00000285708|Q9H334-7|FOXP1', 'ENSG00000114861|ENST00000649528|FOXP1', 'nc|ENSG00000285708|Q9H334-4|FOXP1', 'nc|ENSG00000285708|Q9H334-8|FOXP1'] 21378 5561 ERMAGNEAL True PC9_epitope_Rep4 989.4600295044899 989.4589299358599 28.155 2 0.14160272975387497 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 35655 8858 GTMTGMLYK True NCI_RA007_Epitope_Rep2 1000.47217441132 1000.47106993586 39.103 2 0.14159576945523344 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 113812 4445 TRDYSQPTAA True PC9_epitope_Rep5 1108.51490152832 1108.51380993586 22.167 2 0.1415884773302616 0.0010504626075714112 0.9438714419765777 ['ENSG00000078081|ENST00000265598|LAMP3'] 101146 9714 SLVNLGGSK True PC9_epitope_Rep3 873.4919812557699 873.49088993586 42.319 2 0.14158822833143636 0.0010504626075714112 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 116840 12438 TYMKDLYQL True NCI_RA007_Epitope_Rep5 1173.5739966275698 1173.57288993586 54.501 2 0.14158594168068434 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 6924 17058 AQLELISRL True PC9_epitope_Rep6 1041.61824439805 1041.6171499358602 78.178 2 0.14158511063295967 0.0010504626075714112 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 17987 5983 EIGQSVDEVEK True NCI_RA007_Epitope_Rep5 1231.5932114186696 1231.5921099358602 29.696 2 0.14158456495676605 0.0010504626075714112 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 111164 11493 TLETVPLER True PC9_epitope_Rep2 1056.5815245361598 1056.5804299358601 49.531 2 0.14158165588137453 0.0010504626075714112 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1'] 92072 6870 RPSPPVQSV True PC9_epitope_Rep1 965.52942939365 965.52832993586 31.23 2 0.14158142673749283 0.0010504626075714112 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 107143 15670 SYMPTVSHL True PC9_epitope_Rep3 1033.49026700361 1033.4891699358602 65.419 2 0.1415811032886399 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000168000|Q96G97-3|BSCL2', 'nc|ENSG00000168000|Q96G97|BSCL2', 'ENSG00000168000|ENST00000360796|BSCL2'] 83101 21644 PYNPILGETF True PC9_epitope_Rep1 1149.57062549929 1149.5695299358601 88.082 2 0.14157568902870787 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 14075 13385 DSDMQTLVY True H1975_Epitope_Rep2 1070.45902644498 1070.4579299358602 56.619 2 0.14156666164490778 0.0010504626075714112 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 102432 10963 SPVYVGRVV True PC9_epitope_Rep4 974.5549158654999 974.55380993586 49.939 2 0.14156548436858726 0.0010504626075714112 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 36585 9200 GVLGPIINK True NCI_RA007_Epitope_Rep5 909.56475227321 909.56364993586 42.038 2 0.14156497778019647 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000523568.1_7:102228019-102246337:-|nuORF'] 116838 12372 TYMKDLYQL True NCI_RA007_Epitope_Rep4 1173.5739966275698 1173.57288993586 54.585 2 0.14156269706017238 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 130440 16724 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 69.577 2 0.14155977990558966 0.0010504626075714112 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 7256 8738 ARNTVTQVL True PC9_epitope_Rep2 1000.5665431783599 1000.56544993586 38.971 2 0.14155764864363307 0.0010504626075714112 0.9438714419765777 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000607039.1_1_1:112999611-113005178:+|nuORF'] 39486 7592 HPADSVVSV True PC9_epitope_Rep2 909.4555957470501 909.45448993586 34.573 2 0.14155520713699019 0.0010504626075714112 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 9856 20217 AYLPVNESF True PC9_epitope_Rep2 1038.5022115863 1038.50110993586 83.182 2 0.14155399706497432 0.0010504626075714112 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 112302 4887 [Acetylation]-TM[Oxidation]DKSELVQK True NCI_RA007_Epitope_Rep2 1235.60675400457 1235.6056499358601 23.632 2 0.1415539442337728 0.0010504626075714112 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB'] 92471 9081 RQYSVTDAL True NCI_RA007_Epitope_Rep5 1051.52982331647 1051.5287299358602 41.584 2 0.14154841528910692 0.0010504626075714112 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2'] 47105 7488 IVVVTAGVR True NCI_RA007_Epitope_Rep4 912.5756513100798 912.57454993586 35.447 2 0.1415435975516257 0.0010504626075714112 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 35243 5190 GSIEINIKK True NCI_RA007_Epitope_Rep3 1000.5916952970399 1000.59058993586 27.412 2 0.14154077885089802 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 28801 16763 FTDESYLELY True H1975_Epitope_Rep1 1278.5655996885 1278.56450993586 69.878 2 0.1415398468022359 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 31546 7831 GEFQEVVRA True NCI_RA007_Epitope_Rep3 1033.5192586327696 1033.5181699358602 37.925 2 0.14153883743867776 0.0010504626075714112 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'ENSG00000178685|ENST00000313028|PARP10', 'ENST00000526007.5_1_8:145051654-145057989:-|nuORF'] 74542 12002 NLAENISRV True PC9_epitope_Rep2 1014.54580773378 1014.5447099358599 51.483 2 0.14153660724812903 0.0010504626075714112 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 102632 14777 SQDARFYAL True PC9_epitope_Rep2 1069.51925863277 1069.5181699358602 62.104 2 0.1415346087835678 0.0010504626075714112 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 74241 14902 NIDPITMAY True H1975_Epitope_Rep2 1036.48993265044 1036.48937496793 62.474 1 0.14153189671853164 0.0010504626075714112 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 56791 6411 LEATPDTPA True H1975_Epitope_Rep2 913.4392769765699 913.43872496793 29.583 1 0.14153160923979163 0.0010504626075714112 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 23913 10032 EYNKSWQTF True NCI_RA007_Epitope_Rep5 1201.5403880001697 1201.53928993586 45.227 2 0.14152583938391933 0.0010504626075714112 0.9438714419765777 ['ENSG00000198440|ENST00000333201|ZNF583'] 138138 21501 YQLEIPENFTT True PC9_epitope_Rep1 1353.6452469915296 1353.64414993586 87.547 2 0.14151468250508548 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 73272 5292 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 25.411 2 0.1415130613142336 0.0010504626075714112 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 64010 5042 LQDAEIAR True NCI_RA007_Epitope_Rep2 914.4821448480599 914.48104993586 24.236 2 0.1415084069839133 0.0010504626075714112 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 76814 14574 NVELDPEIQ True PC9_epitope_Rep6 1055.51350454599 1055.51297496793 67.956 1 0.14150824226601233 0.0010504626075714112 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 98394 21111 SIIDEFLHI True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 94.041 2 0.1415077036128608 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 87867 21523 QVLEELTEL True PC9_epitope_Rep2 1072.5652057656798 1072.5641099358602 88.256 2 0.14150718387637656 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'ENSG00000131459|ENST00000253778|GFPT2'] 129218 8757 VTDLAGNEY True H1975_Epitope_Rep1 980.4450906330001 980.44398993586 38.614 2 0.14150687965279357 0.0010504626075714112 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 1796 8453 AEIDAHLVA True H1975_Epitope_Rep1 937.48689587533 937.48578993586 37.442 2 0.14150305576847255 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 132048 21297 VYIDQTMVL True PC9_epitope_Rep5 1080.5525329069999 1080.5514299358601 86.971 2 0.14150107561334582 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 65175 15994 LSDTSVIQFY True H1975_Epitope_Rep2 1171.57610480255 1171.5750099358602 66.719 2 0.14149768354151435 0.0010504626075714112 0.9438714419765777 ['ENSG00000103544|ENST00000417362|VPS35L'] 53415 13419 KVFNDYTAV True PC9_epitope_Rep3 1055.52876068731 1055.52766993586 56.656 2 0.14149765446665227 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 6803 5789 AQFKGTQSL True NCI_RA007_Epitope_Rep5 978.51344497634 978.51234993586 28.954 2 0.1414855631017763 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR'] 8009 11360 ATDPVTGDLY True H1975_Epitope_Rep1 1050.48695544498 1050.4858499358602 48.673 2 0.14148075093280807 0.0010504626075714112 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 49374 22103 KIIDIFTTL True PC9_epitope_Rep1 1062.6324974798601 1062.6314099358601 89.831 2 0.14146870188713473 0.0010504626075714112 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant', 'DNAH5|p.A481T|1|0.13|ENSG00000039139|chr5:13913838-13913838|C/T|missense_variant'] 70518 16907 LYTEKFEEF True PC9_epitope_Rep4 1204.5652057656796 1204.56467496793 73.017 1 0.14146736112244665 0.0010504626075714112 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 77283 19932 NYISGIQTI True PC9_epitope_Rep3 1007.52876068731 1007.52766993586 81.911 2 0.14146399290600484 0.0010504626075714112 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 6125 8522 APNLQNQQV True PC9_epitope_Rep4 1010.5145076055 1010.51340993586 40.257 2 0.14145652615050777 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 140657 21539 YYPNPPLVL True PC9_epitope_Rep3 1074.57498260374 1074.57388993586 88.146 2 0.14145560041113095 0.0010504626075714112 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 34901 8132 GQVTEAVKV True PC9_epitope_Rep1 929.5181960036099 929.51708993586 36.108 2 0.14145305013416729 0.0010504626075714112 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 98479 11323 SIKTGFQAV True PC9_epitope_Rep5 949.52328138405 949.52218993586 48.548 2 0.14145162677444167 0.0010504626075714112 0.9438714419765777 ['ENSG00000125977|ENST00000374980|EIF2S2'] 133247 9611 WEEETVPTT True H1975_Epitope_Rep3 1090.4818700645399 1090.48076993586 41.982 2 0.1414414321212161 0.0010504626075714112 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 86568 14618 QRAWTVEQL True PC9_epitope_Rep4 1129.5880068989297 1129.5869099358601 64.159 2 0.1414241666415904 0.0010504626075714112 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 84556 10368 QHDDQQPVVL True PC9_epitope_Rep1 1177.5727507576098 1177.57164993586 44.764 2 0.14142033493990455 0.0010504626075714112 0.9438714419765777 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 94559 9969 RYIPTAAAF True NCI_RA007_Epitope_Rep5 1008.5392658013599 1008.53816993586 44.988 2 0.14140863194792638 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 59316 3810 LGIHEDSTNR True NCI_RA007_Epitope_Rep2 1140.5523496662001 1140.5506949037901 19.454 3 0.1414007321714387 0.0010504626075714112 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 102677 4826 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 23.658 2 0.14139775181763092 0.0010504626075714112 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 1629 8347 AEFVEVTK True PC9_epitope_Rep2 921.4807478657299 921.47964993586 37.477 2 0.141389750838652 0.0010504626075714112 0.9438714419765777 ['CON__P02769'] 83245 15533 QADLINELY True H1975_Epitope_Rep2 1077.53423999057 1077.5331499358601 64.902 2 0.14138390953894667 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 109999 7882 THTQPGVQL True PC9_epitope_Rep1 979.5086939490698 979.50758993586 35.146 2 0.14138330962910964 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6', 'SEPTIN6|p.Q82E|1|0.55|ENSG00000125354|chrX:119663579-119663579|G/C|missense_variant'] 103755 17974 SRFLANEVL True PC9_epitope_Rep3 1047.57129420563 1047.57018993586 74.341 2 0.14137413932714005 0.0010504626075714112 0.9438714419765777 ['IPO7-WEE1|1|fusion', 'nc|ENSG00000166483|P30291-2|WEE1', 'ENSG00000166483|ENST00000450114|WEE1'] 103643 12635 SRDLSSQLL True PC9_epitope_Rep4 1017.54547338061 1017.54436993586 56.439 2 0.14137141838271072 0.0010504626075714112 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 28357 5975 FSDGTHGGLRY True H1975_Epitope_Rep2 1208.55743504664 1208.55577490379 27.961 3 0.14136856939619313 0.0010504626075714112 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 34813 8045 GQVALRTSL True NCI_RA007_Epitope_Rep4 943.54507945779 943.5439899358599 37.714 2 0.14136835531694894 0.0010504626075714112 0.9438714419765777 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 106825 19848 SYIALPLTL True NCI_RA007_Epitope_Rep2 989.57973363101 989.57918496793 82.197 1 0.14136499740984027 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 71402 22224 MIIENFEAL True PC9_epitope_Rep5 1078.53688284286 1078.53578993586 90.49 2 0.14135730959353096 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'RBM26|p.S30Lfs*6|1|0.39|ENSG00000139746|chr13:79378875-79378890|TATTTTGCTAGGGCGG/-|frameshift_variant', 'nc|ENSG00000139746|Q5T8P6-6|RBM26', 'ENST00000472143.2_1_13:79951480-79979915:-|nuORF'] 79004 20039 PFLPKPLFF True PC9_epitope_Rep6 1104.6371889374798 1104.6360899358601 89.747 2 0.14135631040175925 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 138998 7367 YSFTTTAER True NCI_RA007_Epitope_Rep1 1074.49818883502 1074.49708993586 32.65 2 0.1413541741132222 0.0010504626075714112 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 39978 13318 HQQSIPAVL True PC9_epitope_Rep5 991.5450794577898 991.5445349679301 56.24 1 0.14135012006203132 0.0010504626075714112 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 1026 8563 AEAFGKIVA True H1975_Epitope_Rep2 904.5018176634799 904.50072993586 37.891 2 0.14134378546322615 0.0010504626075714112 0.9438714419765777 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 139189 7301 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.4183249679301 33.021 1 0.14133979080835443 0.0010504626075714112 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 90507 7358 RKAYWQVHL True NCI_RA007_Epitope_Rep3 1199.65636124227 1199.65471490379 36.066 3 0.14133975210879757 0.0010504626075714112 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD', 'ENST00000497544.2_2_11:1775127-1776230:-|nuORF'] 115805 15407 TVMDEIHTV True PC9_epitope_Rep5 1043.49574630687 1043.49464993586 64.272 2 0.14133073611359623 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 88055 18908 QVVGGIYGV True PC9_epitope_Rep1 890.4861675993399 890.48561496793 77.515 1 0.1413282654709994 0.0010504626075714112 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 103651 15652 SRDMTMFVT True PC9_epitope_Rep5 1086.48380172418 1086.4827099358602 65.217 2 0.14132517028555755 0.0010504626075714112 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 102702 12955 SQDPTM[Oxidation]IGV True PC9_epitope_Rep5 962.43789745802 962.43678993586 54.841 2 0.1413224567681108 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 125718 8734 VNELTEFAK True H1975_Epitope_Rep3 1049.53932537101 1049.53822993586 38.599 2 0.1413184133744727 0.0010504626075714112 0.9438714419765777 ['CON__P02769'] 60337 9090 LIGEYGLR True NCI_RA007_Epitope_Rep5 919.5127167003499 919.51160993586 41.62 2 0.14131070522981745 0.0010504626075714112 0.9438714419765777 ['ENSG00000170889|ENST00000302907|RPS9', 'ENST00000460761.1_1_19:54705052-54705521:+|nuORF'] 29813 20472 FVVDEVHLI True PC9_epitope_Rep2 1069.5807962601698 1069.5796899358602 84.175 2 0.14130757671960467 0.0010504626075714112 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 72528 23020 MVDGTLLLL True PC9_epitope_Rep2 973.5518046310099 973.55070993586 94.039 2 0.14130406864304648 0.0010504626075714112 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 76075 18140 NRMADAIIL True PC9_epitope_Rep3 1015.5484505860699 1015.54734993586 74.976 2 0.14129855868807498 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-7|SEC31A'] 110389 20458 TILRLLQQV True PC9_epitope_Rep2 1082.68117900778 1082.68008993586 84.12 2 0.14129832157204397 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 8299 12347 ATLGGPAIVHA True PC9_epitope_Rep5 1005.56072952193 1005.55962993586 52.486 2 0.14128635454804792 0.0010504626075714112 0.9438714419765777 ['ENSG00000123983|ENST00000357430|ACSL3'] 128314 10225 VSDELVQQY True H1975_Epitope_Rep1 1079.51350454599 1079.5124099358602 44.273 2 0.14128581642102953 0.0010504626075714112 0.9438714419765777 ['ENSG00000108510|ENST00000397786|MED13', 'MED13|p.H1262Pfs*53|1|0.19|ENSG00000108510|chr17:61982217-61982218|GT/-|frameshift_variant'] 37747 10672 HAVGDIPGV True PC9_epitope_Rep4 863.45011644379 863.44900993586 48.797 2 0.14128308116387753 0.0010504626075714112 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 113663 15066 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61278993586 63.208 2 0.14128047954246734 0.0010504626075714112 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 114296 8596 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.5853349679301 39.849 1 0.1412789610399683 0.0010504626075714112 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 103746 16262 SRFGKFVQL True PC9_epitope_Rep5 1080.60801406752 1080.6069099358601 67.543 2 0.14127780777171467 0.0010504626075714112 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant'] 11171 20902 DEHLQLISL True PC9_epitope_Rep3 1066.56587447202 1066.56476993586 85.674 2 0.1412720675490804 0.0010504626075714112 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 110452 15291 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.53308993586 63.638 2 0.14127050210241124 0.0010504626075714112 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 138924 11317 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep1 1177.4849072200898 1177.48380993586 48.508 2 0.1412677155281781 0.0010504626075714112 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 46206 8806 ITDLNSDQY True H1975_Epitope_Rep3 1067.47711903727 1067.4760299358602 38.879 2 0.14126648813807197 0.0010504626075714112 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8', 'nc|ENSG00000156671|Q96LT4-2|SAMD8'] 133241 9454 WEEETVPTT True H1975_Epitope_Rep1 1090.4818700645399 1090.48076993586 41.282 2 0.1412618760874857 0.0010504626075714112 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 130436 17593 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 72.464 2 0.1412483946680294 0.0010504626075714112 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 87648 19678 QVAFDFTKV True PC9_epitope_Rep1 1053.54949613189 1053.54838993586 80.515 2 0.1412438648688858 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 108341 4331 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 21.773 2 0.14124133792507926 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 1043 5586 AEAIHSPQV True H1975_Epitope_Rep2 950.4821448480601 950.48104993586 26.488 2 0.14124025545852223 0.0010504626075714112 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.G2160D|1|0.36|ENSG00000047410|chr1:186320401-186320401|C/T|missense_variant'] 76397 13674 NSLKQLYTV True PC9_epitope_Rep2 1064.5866099165999 1064.58550993586 57.887 2 0.14123270618009645 0.0010504626075714112 0.9438714419765777 ['ENSG00000135372|ENST00000257829|NAT10', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 44984 16115 IQIMKVEEI True PC9_epitope_Rep6 1101.61038213629 1101.60928993586 74.326 2 0.1412312565806958 0.0010504626075714112 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 6118 9095 APNLQNQQV True PC9_epitope_Rep2 1010.5145076055 1010.51340993586 40.326 2 0.14122424079104848 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 1843 10894 AEIEELTASA True H1975_Epitope_Rep1 1032.4975201286798 1032.4969749679299 46.865 1 0.14122147298409768 0.0010504626075714112 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B'] 7071 13066 AQVVQVVL True NCI_RA007_Epitope_Rep4 854.5225531080598 854.52200496793 57.357 1 0.14121453877750723 0.0010504626075714112 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4'] 1232 2747 AEDIDKGEVSA True H1975_Epitope_Rep2 1132.52479750568 1132.52370993586 14.601 2 0.14121451010414768 0.0010504626075714112 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 131100 15624 VVMQEGLAHI True PC9_epitope_Rep5 1095.5746653339097 1095.5735699358602 65.108 2 0.1412110422202507 0.0010504626075714112 0.9438714419765777 ['ENSG00000152684|ENST00000274311|PELO'] 21066 10033 ERDMSNVSL True PC9_epitope_Rep2 1049.48115887189 1049.48006993586 43.917 2 0.141209402492425 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 2495 12782 AEQPYFIEA True H1975_Epitope_Rep1 1066.49712620586 1066.49657496793 54.229 1 0.14120511917923997 0.0010504626075714112 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B'] 104209 7079 SSDKSGMIEY True H1975_Epitope_Rep3 1115.48049016555 1115.4793899358601 32.198 2 0.1411990075912212 0.0010504626075714112 0.9438714419765777 ['PPWD1|p.V596*|1|0.26|ENSG00000113593|chr5:65586169-65586169|G/-|frameshift_variant', 'ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 24440 17250 FAGMPITL True H1975_Epitope_Rep2 848.44661128648 848.44606496793 71.643 1 0.14118857479838168 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 126502 12886 VPNKFLVTA True PC9_epitope_Rep2 987.5753169569099 987.57420993586 54.864 2 0.14118345638718338 0.0010504626075714112 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 116836 12082 TYMKDLYQL True NCI_RA007_Epitope_Rep3 1173.5739966275698 1173.57288993586 54.644 2 0.14117973689835356 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 86811 16955 QRPAVIGDVL True PC9_epitope_Rep3 1066.61349337078 1066.6123899358602 70.378 2 0.14117548670801516 0.0010504626075714112 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000463545.1_1_3:154070629-154071064:-|nuORF'] 67350 5185 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep2 1056.49099566004 1056.4898899358602 25.017 2 0.14117457562881652 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 9978 13635 AYSRVQYQF True PC9_epitope_Rep1 1160.5614577979202 1160.56036993586 57.303 2 0.14117337356071313 0.0010504626075714112 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 103011 21002 SQITSLVTL True PC9_epitope_Rep2 960.54916177872 960.54806993586 86.237 2 0.14117182440384954 0.0010504626075714112 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 109362 14091 TGISDVFAK True PC9_epitope_Rep2 936.4916469026 936.49054993586 59.474 2 0.14117094095980096 0.0010504626075714112 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 92128 10816 RQADFVQVL True NCI_RA007_Epitope_Rep3 1074.5821932425 1074.58108993586 49.591 2 0.1411693439584324 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 132843 20825 VYTPTDTLVF True PC9_epitope_Rep4 1154.5859412102598 1154.5848499358601 88.254 2 0.14115464412193743 0.0010504626075714112 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 48796 2823 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 14.931 2 0.14114610687952475 0.0010504626075714112 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 1910 6980 AEINATM[Oxidation]SV True H1975_Epitope_Rep2 950.4378974580201 950.43734496793 31.771 1 0.14113312147753704 0.0010504626075714112 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF'] 134934 11681 YAEMGTRTF True PC9_epitope_Rep5 1074.4804305958999 1074.47932993586 49.927 2 0.14112451458044128 0.0010504626075714112 0.9438714419765777 ['ENSG00000102595|ENST00000376747|UGGT2', 'nc|ENSG00000102595|Q9NYU1-2|UGGT2', 'UGGT2|p.W307Lfs*14|1|0.21|ENSG00000102595|chr13:95989983-95989984|CC/A|frameshift_variant', 'ENST00000467305.1_1_13:96637506-96665674:-|nuORF'] 131295 20199 VVQPLLVSV True PC9_epitope_Rep4 952.5957180483199 952.59462993586 85.833 2 0.14111353132837806 0.0010504626075714112 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 49416 18504 KILPTLEAV True PC9_epitope_Rep5 982.60628273202 982.60518993586 76.199 2 0.1411099637200027 0.0010504626075714112 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 108327 2771 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 14.689 2 0.14110901944888593 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 31485 12267 GEEMPGLSV True H1975_Epitope_Rep1 917.4164333570099 917.4158849679301 52.209 1 0.14110846417254058 0.0010504626075714112 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 88203 9661 QYAPSTAQF True NCI_RA007_Epitope_Rep4 1011.4661604307499 1011.46506993586 44.011 2 0.1411042665433019 0.0010903363889674111 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 134905 13613 YADPTKRLEL True PC9_epitope_Rep3 1204.6451874218799 1204.6435349037902 57.426 3 0.14110135868501716 0.0010903363889674111 0.9438714419765777 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'GTF3C5|p.P179Rfs*26|1|0.09|ENSG00000148308|chr9:133043887-133043887|C/-|frameshift_variant'] 123028 17620 VGYFGRFEEA True PC9_epitope_Rep5 1173.5454733806098 1173.54436993586 72.785 2 0.14110018553447076 0.0010903363889674111 0.9438714419765777 ['nc|ENSG00000118965|Q9P2L0|WDR35', 'ENSG00000118965|ENST00000281405|WDR35', 'ENST00000445063.5_1_2:20113365-20153734:-|nuORF'] 118611 13644 VEALTTLEVA True H1975_Epitope_Rep2 1044.5702911461199 1044.56918993586 57.622 2 0.14109685040678618 0.0010903363889674111 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 102055 8465 SPPPPPPPP True PC9_epitope_Rep3 881.4647038787699 881.46360993586 37.523 2 0.14109599384141236 0.0010903363889674111 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 127527 14242 VQVGETFKV True PC9_epitope_Rep3 1005.5494961318899 1005.54838993586 59.867 2 0.14109527183055323 0.0010903363889674111 0.9438714419765777 ['ENSG00000141646|ENST00000342988|SMAD4', 'SMAD4|p.D415Efs*20|1|0.15|ENSG00000141646|chr18:51067121-51067124|AGAC/-|frameshift_variant'] 83767 15482 QEEDFVLQV True H1975_Epitope_Rep2 1105.5291546101298 1105.52857496793 64.707 1 0.141093118473686 0.0010903363889674111 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 28023 18593 FRADDTFEAL True PC9_epitope_Rep2 1183.55095268387 1183.54984993586 76.869 2 0.14108699786853648 0.0010903363889674111 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 107035 22624 SYLPFTEAF True PC9_epitope_Rep2 1073.5069626135698 1073.50637496793 92.518 1 0.14108015778700764 0.0010903363889674111 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 109947 8931 THSFGNPSI True PC9_epitope_Rep2 958.45084471978 958.44974993586 39.71 2 0.14107583275008684 0.0010903363889674111 0.9438714419765777 ['ENSG00000145012|ENST00000617246|LPP', 'LPP|p.V101Dfs*24|1|0.13|ENSG00000145012|chr3:188484700-188484700|T/-|frameshift_variant'] 48701 6507 KEMLETQVA True H1975_Epitope_Rep3 1047.52704643515 1047.5259499358601 29.999 2 0.14107497634938315 0.0010903363889674111 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 21581 5700 ERSGVNSEL True PC9_epitope_Rep3 989.47778774361 989.47668993586 26.997 2 0.14106763731277178 0.0010903363889674111 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 140594 16898 YYLTPDGQRF True PC9_epitope_Rep3 1258.59823722946 1258.5971499358602 70.155 2 0.14105755317720262 0.0011219746754287546 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 26086 17900 FHEGDVITL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 74.054 2 0.14105220859284007 0.0011219746754287546 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 124620 5821 VLIAAHGNSLR True NCI_RA007_Epitope_Rep4 1149.66184054553 1149.66019490379 29.016 3 0.14105095819357835 0.0011219746754287546 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 32056 6442 GEVPESPEA True H1975_Epitope_Rep3 913.4028914678499 913.40234496793 29.757 1 0.14105047366240145 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 105808 23214 SVINFLDQL True PC9_epitope_Rep2 1047.5600608155898 1047.5589699358602 94.774 2 0.14105044690020532 0.0011219746754287546 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 130428 16919 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 69.903 2 0.14103745537754714 0.0011219746754287546 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 131789 17022 VYAILTHGI True PC9_epitope_Rep4 985.5596668927699 985.55856993586 73.468 2 0.14103655975983828 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 76063 21023 NRLQYLIDL True PC9_epitope_Rep1 1146.6397081186199 1146.6386099358601 85.693 2 0.1410338953969705 0.0011219746754287546 0.9438714419765777 ['ENSG00000137547|ENST00000260102|MRPL15'] 14043 17560 DSDFFTSYY True H1975_Epitope_Rep2 1143.43967089939 1143.4385699358602 72.854 2 0.14102133573016273 0.0011219746754287546 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 113617 15473 TRDAGYGGLSL True PC9_epitope_Rep1 1108.5512870370399 1108.55018993586 64.338 2 0.1410203410475802 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 97695 13011 SHDVVVMTV True PC9_epitope_Rep2 985.49026700361 985.48916993586 55.331 2 0.1410201738872794 0.0011219746754287546 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6'] 132712 18534 VYSEVAAYEF True PC9_epitope_Rep6 1176.5339056373998 1176.53280993586 83.934 2 0.14101179363313585 0.0011219746754287546 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 74426 20883 NIVNSIVGV True PC9_epitope_Rep5 913.5232813840499 913.52218993586 85.379 2 0.1410054178133698 0.0011219746754287546 0.9438714419765777 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10', 'SLC38A10|p.V758Cfs*76|1|0.35|ENSG00000157637|chr17:81246644-81246644|C/-|frameshift_variant'] 3936 14025 AHDTTLVAL True PC9_epitope_Rep1 939.50254593947 939.50144993586 58.786 2 0.14100267745536818 0.0011219746754287546 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 53252 16128 KTFSEILNRV True PC9_epitope_Rep5 1205.67682190333 1205.6751749037899 67.026 3 0.14100239176890844 0.0011219746754287546 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 138225 16223 YQTEIGQTL True PC9_epitope_Rep3 1051.51858992643 1051.51748993586 67.539 2 0.14100176734612205 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 21242 9556 ERHPQTIVL True PC9_epitope_Rep1 1091.60874234351 1091.60764993586 41.615 2 0.1409986205750214 0.0011219746754287546 0.9438714419765777 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 113160 19157 TQDAVPLTL True PC9_epitope_Rep4 956.51786165044 956.51731496793 81.785 1 0.1409903683153861 0.0011219746754287546 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 4458 10009 AKEFTNVYIK True PC9_epitope_Rep5 1211.6550238295897 1211.6533649037901 43.477 3 0.1409899118838238 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 75420 14331 NQFPGFKEV True PC9_epitope_Rep4 1064.52909504048 1064.52857496793 63.025 1 0.1409881908746174 0.0011219746754287546 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 2884 10564 AEYSNTWTP True H1975_Epitope_Rep1 1067.45598966987 1067.4554749679298 45.586 1 0.14098589017539848 0.0011219746754287546 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 47492 19223 IYKSIMEQF True PC9_epitope_Rep1 1157.57908200801 1157.5779899358602 78.738 2 0.14098488462159184 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2', 'ENSG00000128298|ENST00000381669|BAIAP2L2'] 88940 7380 REDENLQVP True H1975_Epitope_Rep2 1098.53055159246 1098.5294499358602 33.327 2 0.14097264263002218 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF'] 40131 13682 HRDSGILGL True PC9_epitope_Rep3 966.5246783663799 966.52358993586 57.697 2 0.14096601395519587 0.0011219746754287546 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 105707 12051 SVHKGFAFV True PC9_epitope_Rep1 990.5287011176598 990.52760993586 51.213 2 0.1409625392291106 0.0011219746754287546 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 137180 12263 YLDSIPPGQY True H1975_Epitope_Rep3 1151.54989005471 1151.5487899358602 52.348 2 0.14095647264381728 0.0011219746754287546 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 8389 4990 ATPKFGPYQK True NCI_RA007_Epitope_Rep5 1135.6025943339098 1135.60093490379 25.899 3 0.14095460096224163 0.0011219746754287546 0.9438714419765777 ['ENSG00000150457|ENST00000382592|LATS2'] 127049 18654 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 76.541 2 0.14094511251533712 0.0011219746754287546 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 67236 11869 LTDLVDDNY True H1975_Epitope_Rep3 1066.48187006454 1066.48127496793 50.804 1 0.14094074341996318 0.0011219746754287546 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 42685 13101 IEVPTSFSA True H1975_Epitope_Rep2 949.47566248529 949.47511496793 55.518 1 0.14093694029159176 0.0011219746754287546 0.9438714419765777 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant'] 69072 11246 LVIPFTIKK True NCI_RA007_Epitope_Rep4 1057.68995278633 1057.6888499358602 50.15 2 0.14093230727686346 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 76572 6428 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.4608649679301 29.645 1 0.14092314927049035 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 109220 16189 TFTFSHATF True PC9_epitope_Rep6 1057.4868958753298 1057.48578993586 74.625 2 0.1409204619864654 0.0011219746754287546 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 26828 20121 FLEKLLPPV True PC9_epitope_Rep4 1054.6426682407398 1054.6415699358602 85.53 2 0.14091981042744434 0.0011219746754287546 0.9438714419765777 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 14063 10835 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 46.705 2 0.14091575404512907 0.0011219746754287546 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 69989 20010 LYFHINQTL True PC9_epitope_Rep1 1147.60259433391 1147.6014899358602 81.795 2 0.1409156568129205 0.0011219746754287546 0.9438714419765777 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 67305 11570 LTDPIQGTEY True H1975_Epitope_Rep3 1135.53971929383 1135.53917496793 49.632 1 0.14091301706558587 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 23772 12166 EYISTVKTL True PC9_epitope_Rep4 1052.57537652656 1052.57426993586 54.613 2 0.14091031050038744 0.0011219746754287546 0.9438714419765777 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 6321 4365 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 23.232 2 0.1409013409188122 0.0011219746754287546 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 136398 8279 YHEGSAPAL True PC9_epitope_Rep5 943.4399456829099 943.43884993586 36.784 2 0.14090082248303995 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000558338.1_1_15:62199375-62209725:-|nuORF'] 76914 19301 NVLNDLAKV True PC9_epitope_Rep1 984.5603951687599 984.55928993586 79.046 2 0.14090022580254724 0.0011219746754287546 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 27040 5256 FLNAENAQK True NCI_RA007_Epitope_Rep2 1033.5192586327698 1033.5181699358602 25.065 2 0.1409002161259504 0.0011219746754287546 0.9438714419765777 ['ENSG00000099901|ENST00000430524|RANBP1', 'nc|ENSG00000099901|P43487-2|RANBP1', 'nc|ENSG00000099901|P43487|RANBP1', 'ENST00000552481.2_1_12:77377861-77378056:-|nuORF', 'ENST00000448394.2_1_22:20110177-20114572:+|nuORF'] 31279 15184 GDSVIVVLR True PC9_epitope_Rep1 956.5654805492 956.56438993586 63.227 2 0.14089935275606238 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 107118 18479 SYM[Oxidation]GHFDLL True PC9_epitope_Rep2 1097.48518200361 1097.48408993586 76.414 2 0.14089842194900135 0.0011219746754287546 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 38098 8733 HENPDIIIA True H1975_Epitope_Rep1 1020.52400966004 1020.52290993586 38.52 2 0.1408979598403352 0.0011219746754287546 0.9438714419765777 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENST00000546869.1_1_12:113614643-113615134:-|nuORF'] 135691 12301 YEIDKTLGI True H1975_Epitope_Rep3 1050.55972646242 1050.5586299358602 52.496 2 0.1408958042533674 0.0011219746754287546 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 128369 13535 VSDPVGVLY True H1975_Epitope_Rep2 947.49639792987 947.4958449679301 57.199 1 0.1408943975579571 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 17702 18264 EHSLPTLGL True PC9_epitope_Rep5 965.51819600361 965.5176449679301 75.267 1 0.14088794485269282 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 103583 15883 SRDGMNIVL True PC9_epitope_Rep5 1003.5120650773499 1003.51096993586 66.084 2 0.14088457946546346 0.0011219746754287546 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 89150 8754 REGPYSISV True H1975_Epitope_Rep3 1006.5083595959 1006.50726993586 38.676 2 0.140880072295299 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 139975 21971 YVITDLTQL True PC9_epitope_Rep3 1064.57537652656 1064.5748749679299 89.813 1 0.14086844687661268 0.0011219746754287546 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 101907 12634 SPLLLQAKA True PC9_epitope_Rep3 939.5753169569099 939.57420993586 53.619 2 0.14085987371425368 0.0011219746754287546 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 139929 17565 YVFPGVTRL True PC9_epitope_Rep6 1050.58621599378 1050.5851099358601 80.204 2 0.1408480247581969 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 135462 7958 YEAQDPEIA True H1975_Epitope_Rep1 1034.4556553166997 1034.45507496793 35.558 1 0.1408451949069779 0.0011219746754287546 0.9438714419765777 ['ENSG00000111678|ENST00000229281|C12orf57'] 11649 15028 DHDGNIVEL True PC9_epitope_Rep1 1010.46688870674 1010.46578993586 62.625 2 0.1408438065182346 0.0011219746754287546 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 1888 5069 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5965849037902 24.616 3 0.1408366405269847 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 110160 6531 TIDDLEEK True PC9_epitope_Rep2 961.46040634397 961.45930993586 30.537 2 0.14083351143690664 0.0011219746754287546 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 116932 18190 TYPENWRAF True PC9_epitope_Rep1 1182.5458077337798 1182.54470993586 74.757 2 0.14083238395628112 0.0011219746754287546 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 3950 14815 AHDVDPIEL True PC9_epitope_Rep2 1007.4923751785899 1007.49126993586 62.249 2 0.14082758210414695 0.0011219746754287546 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 9216 7106 AVPTNIIAAK True NCI_RA007_Epitope_Rep3 996.5967806774798 996.59568993586 35.067 2 0.14082733596086072 0.0011219746754287546 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 47643 12640 IYPPKLHQF True PC9_epitope_Rep1 1141.62841515893 1141.62676490379 53.49 3 0.14082673191845424 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 119849 5682 VEVQDTPNA True H1975_Epitope_Rep2 971.45598966987 971.45488993586 26.854 2 0.14082668521890446 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000178057|Q9BU61-2|NDUFAF3', 'ENSG00000178057|ENST00000326925|NDUFAF3'] 24215 6077 EYVESQLQR True H1975_Epitope_Rep1 1150.56185172074 1150.56074993586 28.442 2 0.14082575647283005 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 31764 10847 GELLFVHSA True H1975_Epitope_Rep1 971.50763131991 971.50652993586 46.682 2 0.14082486761074448 0.0011219746754287546 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 77028 20697 NVVEQFLQA True PC9_epitope_Rep4 1046.53965972418 1046.53856993586 87.772 2 0.14081756344437732 0.0011219746754287546 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25'] 108462 10717 TEEPEIYEP True H1975_Epitope_Rep2 1105.48153571137 1105.48042993586 46.248 2 0.1408113431571544 0.0011219746754287546 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 133269 9400 WEIDNNPKV True H1975_Epitope_Rep2 1113.54547338061 1113.54436993586 41.122 2 0.1408113018560543 0.0011219746754287546 0.9438714419765777 ['ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'PSIP1|p.K246Afs*3|1|0.34|ENSG00000164985|chr9:15474127-15474131|TCTTT/-|frameshift_variant', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000463712.6_1_9:15489396-15510916:-|nuORF'] 6481 6012 APTGDLPRA True PC9_epitope_Rep4 896.4715801643599 896.47048993586 30.101 2 0.14081027583580166 0.0011219746754287546 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 39850 10892 HQGPATTVAF True PC9_epitope_Rep5 1027.50869394907 1027.50758993586 46.884 2 0.14080797355064406 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 6348 4439 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 24.229 2 0.1408072550287797 0.0011219746754287546 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 103804 15050 SRGDFVVEY True PC9_epitope_Rep5 1070.50327421546 1070.5021699358601 62.896 2 0.14080688356419027 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 116941 16626 TYPENWRAF True PC9_epitope_Rep4 1182.5458077337798 1182.54470993586 71.921 2 0.14080173980863633 0.0011219746754287546 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 40729 12004 HTVEDLVKV True PC9_epitope_Rep2 1038.5709598524597 1038.5698699358602 51.49 2 0.14079919663123402 0.0011219746754287546 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 106042 13737 SVLQQNPSL True PC9_epitope_Rep4 984.52400966004 984.52290993586 60.737 2 0.14079857028150872 0.0011219746754287546 0.9438714419765777 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 82124 11023 PTDAYQLNY True H1975_Epitope_Rep3 1083.48728979815 1083.48618993586 47.489 2 0.14079819797493995 0.0011219746754287546 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 106866 15960 SYIEHIFEI True NCI_RA007_Epitope_Rep4 1149.57062549929 1149.57007496793 69.261 1 0.140791027465447 0.0011219746754287546 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 6319 7102 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 32.326 2 0.14079062183906277 0.0011219746754287546 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 96128 10548 SEDVTPMEV True H1975_Epitope_Rep3 1005.4324773439699 1005.43197496793 45.639 1 0.14078772825590943 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5', 'NFAT5|p.L1061Ffs*35|2|0.25|ENSG00000102908|chr16:69693055-69693056|-/T|frameshift_variant'] 14242 4376 DSYVGDEAQSK True NCI_RA007_Epitope_Rep1 1197.51496109797 1197.5138699358602 21.131 2 0.14078069822071895 0.0011219746754287546 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 137404 21183 YLLPAIVHI True PC9_epitope_Rep2 1037.62735252977 1037.6262499358602 86.936 2 0.14077030298278492 0.0011219746754287546 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 138598 8323 YRQKQVVIL True PC9_epitope_Rep4 1145.6920780446499 1145.6909899358602 39.473 2 0.14076839100515834 0.0011219746754287546 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 88512 9620 RADDTFEAL True NCI_RA007_Epitope_Rep4 1036.48253877088 1036.4814499358602 43.852 2 0.1407669054456269 0.0011219746754287546 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 138677 17368 YRTDMIQAL True PC9_epitope_Rep1 1109.55392988933 1109.55282993586 71.615 2 0.14076315883653587 0.0011219746754287546 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 25846 14360 FGFVTFDDHD True NCI_RA007_Epitope_Rep5 1198.4931034545798 1198.49200993586 61.92 2 0.14076281763038914 0.0011219746754287546 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 116453 15027 TYADTLNHL True PC9_epitope_Rep3 1046.5032742154601 1046.5021699358601 62.93 2 0.1407583722893966 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.K1960N|1|0.26|ENSG00000151779|chr2:15238531-15238531|T/A|missense_variant'] 30164 20741 FYSNIQTVI True PC9_epitope_Rep5 1083.5600608155898 1083.5589699358602 84.839 2 0.14075597647683422 0.0011219746754287546 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 97990 20050 SHSFVVNIL True PC9_epitope_Rep5 1014.5498304850599 1014.54872993586 82.176 2 0.1407523478390918 0.0011219746754287546 0.9438714419765777 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 31573 10153 GEFSITYKP True H1975_Epitope_Rep3 1040.5178616504397 1040.51676993586 44.098 2 0.14074465688587937 0.0011219746754287546 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 28343 12583 FSDDSDLQL True NCI_RA007_Epitope_Rep3 1038.4505699362599 1038.4494699358602 56.735 2 0.14073547635272748 0.0011219746754287546 0.9438714419765777 ['ENSG00000025800|ENST00000373625|KPNA6'] 106929 10808 SYITKPEKW True PC9_epitope_Rep5 1150.60225998074 1150.60060490379 46.563 3 0.14073387917087904 0.0011219746754287546 0.9438714419765777 ['ENSG00000172469|ENST00000358812|MANEA'] 95177 17092 SAAFPGASL True PC9_epitope_Rep4 819.41266830591 819.41211496793 73.741 1 0.1407335785573898 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 40691 7890 HTMEFALVK True NCI_RA007_Epitope_Rep3 1074.55320161334 1074.55210993586 38.149 2 0.14072833232239104 0.0011219746754287546 0.9438714419765777 ['ENSG00000182636|ENST00000649030|NDN'] 97698 18027 SHDYSLYSL True PC9_epitope_Rep1 1083.48728979815 1083.48618993586 74.133 2 0.14072720602422767 0.0011219746754287546 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136'] 76049 8118 NRLENDGATAL True PC9_epitope_Rep4 1172.5785644140399 1172.57746993586 38.681 2 0.14072395297539192 0.0011219746754287546 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 75864 13579 NRDNVGLVL True PC9_epitope_Rep2 998.5508931142199 998.54978993586 57.523 2 0.1407186409624352 0.0011219746754287546 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 6086 11319 APM[Oxidation]PPIIHA True PC9_epitope_Rep1 961.50552352537 961.50442993586 48.417 2 0.14070657484856292 0.0011219746754287546 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 693 15932 AAVEWFDGK True PC9_epitope_Rep3 1021.4868958753298 1021.48578993586 66.429 2 0.1406974232892186 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 8363 19908 ATMPDLYHL True PC9_epitope_Rep1 1059.50591706775 1059.50480993586 81.394 2 0.14069452023425363 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1', 'ENST00000373473.5_1_20:36374873-36393614:+|nuORF'] 102304 7043 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 32.491 2 0.14069288859975262 0.0011219746754287546 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 139170 9655 YSSPYPQEY True H1975_Epitope_Rep1 1132.4713053808398 1132.47020993586 42.068 2 0.1406855432983459 0.0011219746754287546 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76737066-76741701:+|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 91852 8582 RPNPPPVSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 37.847 2 0.1406854683890731 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 17632 14280 EHNSILQSL True PC9_epitope_Rep6 1039.52982331647 1039.5287299358602 66.82 2 0.14068359932951657 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 136562 19189 YHSFVSSVF True PC9_epitope_Rep2 1071.5025459394699 1071.5014499358601 79.183 2 0.1406834417295101 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 20997 5812 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 27.75 2 0.1406658003024363 0.0011219746754287546 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 74035 11823 NHSDYNMVL True PC9_epitope_Rep6 1091.47059418819 1091.46948993586 56.683 2 0.1406636701037108 0.0011219746754287546 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 88266 11334 QYFPKAPEF True NCI_RA007_Epitope_Rep3 1125.5494961318898 1125.54838993586 51.699 2 0.140657207201531 0.0011219746754287546 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 64574 7912 LRDQSAVVV True PC9_epitope_Rep2 985.5556441414899 985.55454993586 35.798 2 0.14065500606110382 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 6747 21601 AQEDYLFSV True PC9_epitope_Rep1 1070.49204082542 1070.49147496793 87.912 1 0.14065419486634914 0.0011219746754287546 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 109471 6748 TGVPDRFTG True NCI_RA007_Epitope_Rep4 948.46649478392 948.46538993586 32.576 2 0.14064027393158524 0.0011219746754287546 0.9438714419765777 ['CON__Q05B55'] 84296 15136 QEYVTFLGA True H1975_Epitope_Rep3 1026.5022115862998 1026.5016749679298 63.62 1 0.14063570558980185 0.0011219746754287546 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 129236 8291 VTDMSDAEQY True H1975_Epitope_Rep1 1157.45466934053 1157.45356993586 36.823 2 0.1406265341459811 0.0011219746754287546 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 99168 22403 SLAQYLINV True PC9_epitope_Rep1 1019.5651461960299 1019.56404993586 90.992 2 0.1406237021007979 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 8164 14175 [Acetylation]-ATFVELSTK True H1975_Epitope_Rep1 1036.54407671458 1036.5429699358601 59.699 2 0.140622123899358 0.0011219746754287546 0.9438714419765777 ['ENSG00000198074|ENST00000359579|AKR1B10', 'nc|ENSG00000227471|C9JRZ8|AKR1B15'] 2516 7779 AEQRVPLSV True H1975_Epitope_Rep2 997.5556441414899 997.55454993586 34.868 2 0.14062045029708398 0.0011219746754287546 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 35696 10668 GTQPWFISK True NCI_RA007_Epitope_Rep3 1062.5498304850598 1062.5487299358601 49.01 2 0.14061571572402667 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'MYLK|p.K903Rfs*3|1|0.3|ENSG00000065534|chr3:123700762-123700762|C/-|frameshift_variant'] 113879 8445 TRHGVPISV True PC9_epitope_Rep5 964.5454138109599 964.54430993586 37.426 2 0.14061128682729102 0.0011219746754287546 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000484693.1_1_6:30709216-30709507:-|nuORF', 'ENST00000484168.1_1_6:30709216-30709966:-|nuORF'] 94824 13771 RYLTVATVF True NCI_RA007_Epitope_Rep2 1068.59678067748 1068.59568993586 58.214 2 0.14060802513976495 0.0011219746754287546 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 67260 12766 LTDLYSPEY True H1975_Epitope_Rep2 1099.50735653639 1099.50677496793 54.208 1 0.14060541078376804 0.0011219746754287546 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 21096 6588 ERDPHEEIL True PC9_epitope_Rep2 1136.5462016566 1136.5445549037902 30.754 3 0.1406007350131253 0.0011219746754287546 0.9438714419765777 ['ENSG00000153140|ENST00000283122|CETN3'] 110021 12060 THTTPVLL True PC9_epitope_Rep5 880.5018176634799 880.50072993586 51.384 2 0.14058397136056452 0.0011219746754287546 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 102937 19028 SQIISLQTL True PC9_epitope_Rep6 1001.5757108797301 1001.5746099358599 85.833 2 0.14058270826442001 0.0011219746754287546 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 73958 20064 NHMAVAFVL True PC9_epitope_Rep5 1000.5164221818 1000.51532993586 82.229 2 0.1405779913645715 0.0011219746754287546 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 8439 4349 ATSDMDIGK True NCI_RA007_Epitope_Rep4 936.4222470134399 936.42114993586 23.074 2 0.14057491279700576 0.0011219746754287546 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1'] 94540 16337 RYILLPVVL True NCI_RA007_Epitope_Rep3 1084.7008518231999 1084.6997499358602 71.966 2 0.14056873047252086 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'DOCK4|p.K1934Qfs*18|1|0.1|ENSG00000128512|chr7:111728375-111728376|-/G|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4'] 59877 7814 LHHDDPEVL True PC9_epitope_Rep1 1073.51417325233 1073.5130699358601 34.881 2 0.14056666418960406 0.0011219746754287546 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 91256 11596 RLTPKLMEV True PC9_epitope_Rep4 1085.6267009067699 1085.6256099358602 52.363 2 0.14056573236984016 0.0011219746754287546 0.9438714419765777 ['RAD21-EIF3H|4|fusion', 'RAD21-EIF3H|2|fusion', 'RAD21-EIF3H|1|fusion', 'RAD21-EIF3H|3|fusion', 'EIF3H|p.K178R|1|0.38|ENSG00000147677|chr8:116657239-116657239|T/C|missense_variant', 'ENSG00000147677|ENST00000521861|EIF3H', 'EIF3H|p.E217Nfs*30|1|0.19|ENSG00000147677|chr8:116655914-116655914|C/-|frameshift_variant'] 16499 9305 EENFAVEA True H1975_Epitope_Rep2 907.3923267841499 907.39177496793 40.75 1 0.14056309265493055 0.0011219746754287546 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 140479 20217 YYIEGIENSVF True PC9_epitope_Rep6 1332.62378327096 1332.62268993586 90.443 2 0.14056081467780146 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 47907 15728 IYVPDIRNVF True NCI_RA007_Epitope_Rep3 1234.6710082469 1234.66990993586 69.505 2 0.14055950900629416 0.0011219746754287546 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6'] 63972 9482 LQAETSQQL True PC9_epitope_Rep2 1016.51383889916 1016.51274993586 41.814 2 0.14055409876922764 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 39938 13990 HQNQLLSSL True PC9_epitope_Rep2 1038.5458077337798 1038.54470993586 59.085 2 0.14055120459107348 0.0011219746754287546 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 99270 21358 SLDDLLTNV True PC9_epitope_Rep4 988.5076908895601 988.50714496793 90.321 1 0.14055034652243167 0.0011219746754287546 0.9438714419765777 ['ENSG00000143819|ENST00000272167|EPHX1'] 22197 13955 ETDEKDFYLYY True H1975_Epitope_Rep2 1484.6347418774799 1484.6336499358601 58.827 2 0.1405418304554346 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 103913 11958 SRMDGEGQLTL True PC9_epitope_Rep6 1205.5710365054497 1205.56992993586 57.253 2 0.14054108876686375 0.0011219746754287546 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 107645 19725 TAIDILTTV True PC9_epitope_Rep6 945.5382627418501 945.53716993586 88.53 2 0.14054054027381233 0.0011219746754287546 0.9438714419765777 ['ENSG00000198700|ENST00000361565|IPO9'] 127368 13139 VQPSLFYHL True NCI_RA007_Epitope_Rep3 1102.58113061334 1102.58002993586 58.958 2 0.14053867480945548 0.0011219746754287546 0.9438714419765777 ['MAP3K6|p.D642*|1|0.14|ENSG00000142733|chr1:27360835-27360836|-/A|frameshift_variant', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'ENSG00000142733|ENST00000357582|MAP3K6'] 75913 15193 NRDTQELLL True PC9_epitope_Rep3 1100.58258716532 1100.5814899358602 63.584 2 0.14053832080753634 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'EGFR-TEAD2|1|fusion', 'EGFR-TEAD2|3|fusion', 'EGFR-TEAD2|2|fusion', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 76513 11156 NTDLGNDLY True H1975_Epitope_Rep2 1023.4509042894299 1023.4503749679301 47.949 1 0.14053635093549224 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 18048 13815 EIIRQLNGV True PC9_epitope_Rep3 1040.59784330664 1040.59674993586 58.218 2 0.14053591466447443 0.0011219746754287546 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 28405 10984 FSDVNMQEY True H1975_Epitope_Rep1 1131.4542754177098 1131.4531699358602 47.216 2 0.14053323108778176 0.0011219746754287546 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 11682 20196 DHDRFWVL True PC9_epitope_Rep5 1086.52467836638 1086.5235899358602 82.73 2 0.14053273847952755 0.0011219746754287546 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 60369 19318 LIIDENGVHEL True PC9_epitope_Rep1 1250.65066672514 1250.6495699358602 79.111 2 0.14052841047742387 0.0011219746754287546 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 132589 12147 VYPPPHQVF True PC9_epitope_Rep2 1082.5549158654999 1082.55380993586 52.033 2 0.14052738866239864 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 105637 10985 SVFGTMPLK True NCI_RA007_Epitope_Rep4 978.5208388558999 978.51974993586 49.122 2 0.14052329466325786 0.0011219746754287546 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 113102 10859 TQAEQTLNV True PC9_epitope_Rep2 1002.49818883502 1002.49708993586 47.087 2 0.14051594660917338 0.0011219746754287546 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 32270 9968 GFQNALIVR True H1975_Epitope_Rep3 1016.5767139392399 1016.57560993586 43.376 2 0.1405115010177915 0.0011219746754287546 0.9438714419765777 ['CON__P02769'] 2146 8562 AELWKNPTA True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 37.887 2 0.14051023578781383 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|494|14.5|0.62|4.54|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C', 'chr20:45815540-45815854|495|17.2|0.56|4.94|+|ENST00000617055|UBE2C,UBE2C', 'nc|ENSG00000175063|O00762-3|UBE2C', 'nc|ENSG00000175063|O00762-4|UBE2C', 'chr20:45814470-45815390|498|22.16|0.65|5.09|+|ENST00000335046|UBE2C,UBE2C'] 22410 16183 ETEYSFLDY True H1975_Epitope_Rep3 1165.4815357113698 1165.48042993586 67.704 2 0.1405094109682027 0.0011219746754287546 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 22368 6710 ETEREYFNRY True H1975_Epitope_Rep2 1405.6262428824498 1405.62514993586 30.722 2 0.14050937744443442 0.0011219746754287546 0.9438714419765777 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 8623 8727 AVALPLQTK True NCI_RA007_Epitope_Rep2 939.57531695691 939.57420993586 38.591 2 0.1405088451779675 0.0011219746754287546 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 66996 20266 LTAFFLPGVHS True PC9_epitope_Rep4 1187.6338944621898 1187.63278993586 86.096 2 0.14050829571550918 0.0011219746754287546 0.9438714419765777 ['NECTIN1|p.P276Qfs*10|1|0.23|ENSG00000110400|chr11:119677126-119677126|G/-|frameshift_variant', 'nc|ENSG00000110400|Q15223-3|NECTIN1', 'nc|ENSG00000110400|Q15223-2|NECTIN1', 'ENSG00000110400|ENST00000264025|NECTIN1'] 83239 11936 QADFSVLHY True H1975_Epitope_Rep2 1078.5083595959 1078.5072699358602 50.99 2 0.1405063180621162 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14'] 9533 20015 AYAENIALL True PC9_epitope_Rep4 976.5229470308799 976.52239496793 85.121 1 0.14050334517746005 0.0011219746754287546 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 24473 21926 FAIDPHLLL True PC9_epitope_Rep5 1037.59096702105 1037.5898699358602 89.38 2 0.140499866408126 0.0011219746754287546 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 71135 19832 METVWTILP True H1975_Epitope_Rep2 1088.55761828744 1088.55652993586 82.269 2 0.1404989562819336 0.0011219746754287546 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 26124 12420 FHGISPGL True PC9_epitope_Rep4 826.43373810366 826.43264993586 55.578 2 0.14049832706947343 0.0011219746754287546 0.9438714419765777 ['ENSG00000174282|ENST00000380599|ZBTB4'] 102764 4116 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 22.149 2 0.14049078557320124 0.0011219746754287546 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 17793 18481 EHVPVVIGL True PC9_epitope_Rep2 961.5596668927699 961.55856993586 76.421 2 0.14048355583942848 0.0011219746754287546 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6', 'SOCS6|p.E434Gfs*2|1|0.26|ENSG00000170677|chr18:70325969-70325979|AGCACTCAAAT/-|frameshift_variant'] 21277 15885 ERINNINIL True PC9_epitope_Rep4 1097.61930702721 1097.61820993586 69.032 2 0.14047968061934146 0.0011219746754287546 0.9438714419765777 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 60159 13439 LHYPSTTAL True PC9_epitope_Rep1 1001.51819600361 1001.51708993586 56.553 2 0.14046760328129484 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 127143 9252 VQDNPRALV True PC9_epitope_Rep2 1010.5508931142199 1010.54978993586 40.926 2 0.1404647832093427 0.0011219746754287546 0.9438714419765777 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89', 'KLHL24-CEP89|1|fusion'] 17378 16491 EHFAALQSL True PC9_epitope_Rep2 1014.51344497634 1014.51234993586 68.674 2 0.14046321009883017 0.0011219746754287546 0.9438714419765777 ['ENST00000526789.1_1_11:36300025-36310962:-|nuORF', 'ENST00000528608.5_1_11:36298627-36310962:-|nuORF', 'nc|ENSG00000110442|Q9P000-2|COMMD9', 'ENSG00000110442|ENST00000263401|COMMD9'] 96449 11195 SEILYSAPP True H1975_Epitope_Rep2 975.49131254943 975.4907649679301 48.1 1 0.140451452271626 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 63492 20794 LPIFLPRVA True PC9_epitope_Rep3 1024.64333694708 1024.64222993586 85.255 2 0.14044759254861547 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 104272 8283 SSDTSALSY True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 36.811 2 0.14044720496489158 0.0011219746754287546 0.9438714419765777 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 28105 14827 FREDSVVL True PC9_epitope_Rep3 963.5025459394699 963.50144993586 62.168 2 0.14044480773973242 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.T809Rfs*37|1|0.17|ENSG00000106608|chr7:43877038-43877038|T/-|frameshift_variant'] 77393 20157 NYLSIFRKF True PC9_epitope_Rep5 1186.6498788795 1186.6482449037899 82.582 3 0.14044436894213175 0.0011219746754287546 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 104081 17077 SRVDDVYSVL True PC9_epitope_Rep4 1151.58225281215 1151.5811499358601 73.683 2 0.1404435703285015 0.0011219746754287546 0.9438714419765777 ['ENST00000464255.1_1_2:219265892-219269145:+|nuORF', 'nc|ENSG00000144579|Q9GZU7-3|CTDSP1', 'nc|ENSG00000144579|Q9GZU7-2|CTDSP1', 'ENSG00000144579|ENST00000273062|CTDSP1'] 1057 9653 AEAIRILAA True H1975_Epitope_Rep2 926.5549158654999 926.55380993586 42.111 2 0.14043676145207362 0.0011219746754287546 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 21556 17224 ERSDTFINL True PC9_epitope_Rep2 1093.54038800017 1093.53928993586 71.513 2 0.14043557862823505 0.0011219746754287546 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 104012 19343 SRSETFLLL True PC9_epitope_Rep4 1064.5866099165999 1064.58550993586 82.512 2 0.1404304036612558 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A'] 45386 8547 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.43850993586 37.831 2 0.14042862088599725 0.0011219746754287546 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 138388 11944 YRDPGAVDL True PC9_epitope_Rep1 1004.4927095317598 1004.49160993586 50.809 2 0.1404269860089628 0.0011219746754287546 0.9438714419765777 ['ENST00000577240.1_1_17:73264046-73266276:-|nuORF', 'nc|ENSG00000125457|A9UHW6-2|MIF4GD', 'nc|ENSG00000125457|A9UHW6-3|MIF4GD'] 26006 5432 FHDESTQV True PC9_epitope_Rep1 961.41412485789 961.41302993586 25.728 2 0.14042684945179573 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 31886 5804 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 27.348 2 0.1404266819056638 0.0011219746754287546 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 21811 7596 ESDPAYQQY True H1975_Epitope_Rep3 1099.44581890899 1099.44472993586 34.199 2 0.1404247839467953 0.0011219746754287546 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 102473 7723 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 35.082 2 0.1404151058108805 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 108784 11658 [Acetylation]-TEQAISFAK True NCI_RA007_Epitope_Rep1 1035.5236756231698 1035.52317496793 49.321 1 0.14041292047508513 0.0011219746754287546 0.9438714419765777 ['ENSG00000169100|ENST00000381401|SLC25A6', 'ENST00000475167.6_1_X:1509126-1510935:-|nuORF', 'ENST00000484026.6_1_X:1509126-1510935:-|nuORF'] 106513 21218 SVVPQQLLTV True PC9_epitope_Rep5 1082.63356010902 1082.6324699358602 86.663 2 0.14041148424584934 0.0011219746754287546 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 73160 9579 NEDLRSWTA True H1975_Epitope_Rep2 1090.50433684462 1090.5032299358602 41.82 2 0.14040351861434347 0.0011219746754287546 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 3897 11428 AHDDSVM[Oxidation]YL True PC9_epitope_Rep1 1065.44371111445 1065.4426099358602 48.836 2 0.14039601031222435 0.0011219746754287546 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 6303 5501 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 26.553 2 0.1403932148537364 0.0011219746754287546 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 7511 9127 ASELKALGY True H1975_Epitope_Rep2 950.5072969667399 950.50618993586 40.059 2 0.14038437749633764 0.0011219746754287546 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 17758 6135 EHTQTVSQL True PC9_epitope_Rep3 1041.50908787189 1041.50798993586 28.646 2 0.14038297768640987 0.0011219746754287546 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 14062 10644 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 45.966 2 0.14037731225918113 0.0011219746754287546 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 11658 14981 DHDGNIVEL True PC9_epitope_Rep5 1010.46688870674 1010.46637496793 62.628 1 0.14037135302164386 0.0011219746754287546 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 89212 5370 REILVNQTA True NCI_RA007_Epitope_Rep3 1042.5771078620598 1042.5760099358602 28.13 2 0.1403708856176351 0.0011219746754287546 0.9438714419765777 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D', 'ENST00000502526.1_1_4:119659352-119659508:-|nuORF'] 47274 21869 IYEPNFIFF True PC9_epitope_Rep6 1188.5855472874398 1188.5844499358602 97.019 2 0.14036676206633944 0.0011219746754287546 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 1450 7273 AEEIPSRIQA True H1975_Epitope_Rep3 1112.58258716532 1112.5814899358602 32.95 2 0.14036466598226155 0.0011219746754287546 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 97942 18950 SHQLDFNVL True PC9_epitope_Rep2 1071.53490869691 1071.53380993586 78.256 2 0.14035721786526717 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 31280 14564 GDSVIVVLR True PC9_epitope_Rep2 956.5654805492 956.56438993586 61.29 2 0.14035554760918234 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 96664 10856 SENPSVYVP True NCI_RA007_Epitope_Rep2 990.4658260775799 990.4652749679301 46.832 1 0.1403519362395569 0.0011219746754287546 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 45413 9100 ISDSDYQAEY True H1975_Epitope_Rep2 1189.47751296009 1189.47697496793 39.954 1 0.14034381613269944 0.0011219746754287546 0.9438714419765777 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3'] 6115 9672 APNLQNQQV True PC9_epitope_Rep1 1010.5145076055 1010.51340993586 42.06 2 0.1403421352427677 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 137386 21752 YLLDLHSYL True PC9_epitope_Rep3 1135.59136094387 1135.59026993586 88.965 2 0.14034103752279925 0.001131001131001131 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'MARCHF6|p.A560T|1|0.21|ENSG00000145495|chr5:10410263-10410263|G/A|missense_variant'] 100153 20848 SLLDRFLATV True PC9_epitope_Rep6 1133.6444591458899 1133.6433699358602 92.965 2 0.1403394077830147 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 1317 5809 AEEAARLSVA True H1975_Epitope_Rep1 1015.5298233164699 1015.52872993586 27.416 2 0.1403381595030266 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 47726 13302 IYQKAFDLI True NCI_RA007_Epitope_Rep4 1109.6120963884498 1109.61098993586 58.308 2 0.1403375781362078 0.001131001131001131 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 96698 2760 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 14.7 2 0.1403352811884022 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 44856 14811 IPYLPITN True H1975_Epitope_Rep1 929.5222187548901 929.52167496793 62.197 1 0.14032910845992747 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 21229 13089 ERFSTSQVL True PC9_epitope_Rep1 1065.54547338061 1065.54436993586 55.215 2 0.14032728443074077 0.001131001131001131 0.9438714419765777 ['ENSG00000181481|ENST00000328381|RNF135'] 138082 7454 YQEGAKMAV True PC9_epitope_Rep3 995.4746169394698 995.47350993586 33.676 2 0.14032354227121574 0.001131001131001131 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 27285 24223 FLYPFPLAL True PC9_epitope_Rep2 1079.60555445603 1079.60497496793 98.712 1 0.14032303251983105 0.001131001131001131 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 108713 3844 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep3 1063.39504666987 1063.39394993586 19.897 2 0.14032164661127994 0.001131001131001131 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 102586 15621 SQANIAQVL True PC9_epitope_Rep6 942.5134449763399 942.51289496793 72.291 1 0.14031810994965432 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 11860 11186 DHNGMLSV True PC9_epitope_Rep2 871.38580193507 871.38470993586 48.352 2 0.14031094587584556 0.001131001131001131 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 124174 17586 VLADALKSI True PC9_epitope_Rep2 928.5593325396001 928.55822993586 72.922 2 0.14030447977576563 0.001131001131001131 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 127216 11274 VQIEEVRQV True PC9_epitope_Rep3 1098.6033226098998 1098.6022299358601 48.374 2 0.14030443069445758 0.001131001131001131 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 117253 20566 TYYRGFLTL True PC9_epitope_Rep1 1132.59169529704 1132.5905899358602 83.921 2 0.1403042980075523 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'ENST00000554761.5_1_14:90397883-90418750:-|nuORF', 'ENST00000553871.5_1_14:90263589-90418750:-|nuORF', 'nc|ENSG00000140025|Q9BUY7-6|EFCAB11', 'ENST00000556639.5_1_14:90302986-90416480:-|nuORF'] 8149 7565 ATFPDPNVK True NCI_RA007_Epitope_Rep1 987.5025459394699 987.50144993586 33.418 2 0.14030067910503108 0.001131001131001131 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 54284 8439 KYPNVFKKI True PC9_epitope_Rep4 1135.67536535135 1135.67371490379 39.926 3 0.14029996851318816 0.001131001131001131 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 32851 20439 GIIDAFHQI True PC9_epitope_Rep3 1012.5341804209202 1012.53308993586 83.874 2 0.1402979805695446 0.001131001131001131 0.9438714419765777 ['ENSG00000100372|ENST00000435456|SLC25A17', 'MKL1-SLC25A17|1|fusion', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 137186 14030 YLDTVPEVY True H1975_Epitope_Rep2 1097.52809198097 1097.52757496793 59.117 1 0.1402960277829304 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 91660 9983 RPFQSLIHA True PC9_epitope_Rep6 1067.58761297611 1067.58650993586 48.953 2 0.14029158941433745 0.001131001131001131 0.9438714419765777 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 122530 3581 VGSTSENITQK True NCI_RA007_Epitope_Rep2 1162.5829810881398 1162.58188993586 18.578 2 0.14027673178870015 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 138310 19444 YRAPELLL True PC9_epitope_Rep5 973.5596668927699 973.55856993586 79.842 2 0.14027595585898567 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'CDK19|p.G207V|2|0.16|ENSG00000155111|chr6:110632056-110632056|C/A|missense_variant', 'ENSG00000155111|ENST00000368911|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'CDK8|p.H300Qfs*3|1|0.14|ENSG00000132964|chr13:26397191-26397192|AT/-|frameshift_variant', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 87327 12279 QTALVELLK True NCI_RA007_Epitope_Rep5 1013.6120963884499 1013.61098993586 53.884 2 0.14027454408423054 0.001131001131001131 0.9438714419765777 ['CON__P02769'] 136334 15793 YHAGVSELL True PC9_epitope_Rep5 987.50254593947 987.50144993586 65.735 2 0.1402639607439233 0.001131001131001131 0.9438714419765777 ['ENST00000498789.1_1_21:38634223-38639601:-|nuORF'] 135044 16766 YAITTLHNL True PC9_epitope_Rep3 1044.5603951687601 1044.55928993586 69.635 2 0.14026303745125362 0.001131001131001131 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000168036|ENST00000349496|CTNNB1', 'ENSG00000173801|ENST00000393931|JUP'] 40827 21163 HVLDTLIQL True PC9_epitope_Rep5 1050.60734536118 1050.6062499358602 86.457 2 0.14025681769556855 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 111396 18043 TLKDLDVAL True PC9_epitope_Rep1 986.5648118428599 986.56370993586 74.194 2 0.14024952666045354 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000203705|Q17R31-5|TATDN3', 'nc|ENSG00000203705|Q17R31-2|TATDN3', 'ENSG00000203705|ENST00000366974|TATDN3', 'nc|ENSG00000203705|Q17R31-3|TATDN3'] 33776 10452 GLSQSALPYR True PC9_epitope_Rep4 1090.5771078620598 1090.5760099358602 47.914 2 0.14024908506285058 0.001131001131001131 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 70978 5564 MEQGRVTIA True H1975_Epitope_Rep2 1003.5120650773498 1003.51096993586 26.411 2 0.14024834334129269 0.001131001131001131 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'ENST00000476448.1_1_6:52141011-52144220:-|nuORF'] 47429 12767 IYIKQIKTF True PC9_epitope_Rep2 1152.6906810623198 1152.68958993586 54.414 2 0.14023716203116515 0.001131001131001131 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 127514 23057 VQVEDIVFL True PC9_epitope_Rep1 1060.580461907 1060.57987496793 93.489 1 0.14022865793848005 0.001131001131001131 0.9438714419765777 ['ENSG00000197780|ENST00000338366|TAF13'] 120334 13819 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 64.959 2 0.1402264382438227 0.001131001131001131 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 95344 7615 SAGPAIKL True H1975_Epitope_Rep3 755.45413919507 755.45304993586 34.271 2 0.14022264424310485 0.001131001131001131 0.9438714419765777 ['ENSG00000166897|ENST00000402918|ELFN2'] 75544 9532 NQLIRTSGV True PC9_epitope_Rep5 986.55089311422 986.54978993586 41.623 2 0.14021676772853964 0.001131001131001131 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 84912 12248 QHSVPLQL True PC9_epitope_Rep2 920.50796567308 920.50686993586 52.423 2 0.14021511883242527 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 9800 12268 AYLHTTTTF True PC9_epitope_Rep2 1053.51311062317 1053.51200993586 52.498 2 0.14021248697012928 0.001131001131001131 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 8153 7064 ATFPDPNVK True NCI_RA007_Epitope_Rep4 987.5025459394699 987.50144993586 33.796 2 0.14021248576703968 0.001131001131001131 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 76860 21722 NVIESFTEL True PC9_epitope_Rep2 1050.5233409537 1050.5222499358601 89.031 2 0.14020930362854084 0.001131001131001131 0.9438714419765777 ['RAB40A|p.I163V|1|0.09|ENSG00000172476|chrX:103500270-103500270|T/C|missense_variant', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENSG00000197562|ENST00000248139|RAB40C'] 113307 18714 TQIEDAVSL True PC9_epitope_Rep5 974.4920408254198 974.49094993586 77.002 2 0.14020304597900807 0.001131001131001131 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3'] 7165 10180 ARDDQIHIL True PC9_epitope_Rep4 1079.57235683479 1079.5712499358601 46.834 2 0.14020238383939146 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 123358 19621 VIAEILRGV True PC9_epitope_Rep3 968.6018660579199 968.60076993586 80.709 2 0.1401996787281583 0.001131001131001131 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 138801 12085 YSDGLGGNSLY True H1975_Epitope_Rep3 1144.5036681382799 1144.50256993586 51.65 2 0.1401888604648688 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3'] 103939 18816 SRPPLLGF True PC9_epitope_Rep1 885.50723739709 885.50614993586 77.162 2 0.14018817322745158 0.001131001131001131 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000538070.1_1_12:109958991-109971866:+|nuORF', 'ENSG00000151148|ENST00000342494|UBE3B'] 38081 10787 HENIIVAIA True H1975_Epitope_Rep2 978.5498304850599 978.54872993586 46.52 2 0.1401838752271055 0.001131001131001131 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 31898 7439 GEQKFSSLP True H1975_Epitope_Rep3 991.4974605590298 991.49636993586 33.592 2 0.14017601038725974 0.001131001131001131 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT'] 96717 9932 SEQESLLQQA True H1975_Epitope_Rep2 1131.54078192299 1131.53968993586 43.193 2 0.14017180590084416 0.001131001131001131 0.9438714419765777 ['ENSG00000198952|ENST00000361813|SMG5'] 135712 13175 YEIPSNLTP True H1975_Epitope_Rep2 1032.51277627 1032.51166993586 55.802 2 0.14016803804552821 0.001131001131001131 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 114284 7952 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 38.384 2 0.14015464422891963 0.001131001131001131 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 73822 9274 NHDTGEYVL True PC9_epitope_Rep6 1046.46688870674 1046.4657899358601 45.826 2 0.1401501656788327 0.001131001131001131 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 14897 15468 DYKESFNTI True PC9_epitope_Rep3 1115.5135045459901 1115.5124099358602 64.65 2 0.14014971138948973 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 26728 21758 FLDGNELTL True PC9_epitope_Rep1 1020.51277627 1020.51166993586 88.526 2 0.1401450000264834 0.001131001131001131 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 76130 8808 NRPSVQAAL True PC9_epitope_Rep1 954.5246783663799 954.52358993586 38.722 2 0.14014328424204486 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 97603 16848 SHADVVNLL True PC9_epitope_Rep5 966.51344497634 966.51234993586 69.815 2 0.14014154951669158 0.001131001131001131 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 108229 4912 TEAGAGAVAAA True H1975_Epitope_Rep2 887.4348603024698 887.43431496793 23.976 1 0.14014126628006726 0.001131001131001131 0.9438714419765777 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 54105 20623 KYMDVQFDF True PC9_epitope_Rep5 1191.52704643515 1191.5259499358601 84.377 2 0.1401408481371784 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 96247 8801 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 38.819 1 0.14013584612633329 0.001131001131001131 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 77027 21645 NVVEQFLQA True PC9_epitope_Rep3 1046.53965972418 1046.53856993586 88.556 2 0.14012960743266537 0.001131001131001131 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25'] 113915 17144 TRIGLINDM True PC9_epitope_Rep1 1031.54336520563 1031.54226993586 70.767 2 0.1401242595938171 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.P364L|1|0.32|ENSG00000107581|chr10:119065430-119065430|G/A|missense_variant'] 83077 21078 PYMDSPQSIGF True PC9_epitope_Rep1 1240.5434247752798 1240.54287496793 85.91 1 0.14011813747586205 0.001131001131001131 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 96658 10394 SENPSVYVP True H1975_Epitope_Rep3 990.4658260775799 990.4652749679301 45.037 1 0.1401119461300928 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 95267 11199 SADPNVVDL True H1975_Epitope_Rep3 928.45017601344 928.44906993586 48.174 2 0.14011175615962762 0.001131001131001131 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 8108 15558 ATEPVIAFY True H1975_Epitope_Rep2 1009.5120479940099 1009.5114749679301 65.0 1 0.1401075578327348 0.001131001131001131 0.9438714419765777 ['ENSG00000106992|ENST00000644144|AK1'] 130426 16845 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.49037496793 69.619 1 0.1400976186397614 0.001131001131001131 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 103899 6806 SRLSSTSSL True PC9_epitope_Rep5 936.4876241513201 936.48652993586 31.151 2 0.14009498277996965 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 47423 8942 IYIKQIKTF True NCI_RA007_Epitope_Rep5 1152.6906810623198 1152.6890249037901 41.055 3 0.14009176867173942 0.001131001131001131 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 88850 7784 REAEEPVFAA True H1975_Epitope_Rep2 1117.54038800017 1117.53928993586 34.888 2 0.1400846125646101 0.001131001131001131 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 86799 12686 QRNPQGFVL True PC9_epitope_Rep2 1057.5668775315298 1057.56578993586 54.103 2 0.14008190565857462 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 13935 20430 DRFSDIYAL True PC9_epitope_Rep3 1098.53457434374 1098.53346993586 83.837 2 0.14008163039000174 0.001131001131001131 0.9438714419765777 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 7627 9592 ASLELLEGK True H1975_Epitope_Rep1 958.5335117145798 958.53240993586 41.821 2 0.14007939436806738 0.001131001131001131 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF', 'ENSG00000170950|ENST00000304801|PGK2'] 16641 8413 EESPVQYAA True H1975_Epitope_Rep2 992.4450906329998 992.44454496793 37.315 1 0.14007674901835765 0.001131001131001131 0.9438714419765777 ['ENSG00000143653|ENST00000366510|SCCPDH'] 29818 20956 FVVDLSDQV True PC9_epitope_Rep5 1020.51277627 1020.51166993586 85.667 2 0.14006726278581297 0.001131001131001131 0.9438714419765777 ['ENSG00000161057|ENST00000292644|PSMC2', 'ENST00000460021.1_1_7:102994369-103002536:+|nuORF'] 64886 11421 LSASFEPFSNK True NCI_RA007_Epitope_Rep2 1225.5979028762897 1225.5968099358602 49.016 2 0.14006381494104422 0.001131001131001131 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR', 'ENST00000590325.1_1_19:13049472-13051084:+|nuORF'] 7559 16190 ASFNDTFVHV True PC9_epitope_Rep6 1135.5298233164701 1135.5287299358602 74.63 2 0.14006088118205126 0.001131001131001131 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 108398 6060 TEEAAVAIKA True H1975_Epitope_Rep3 1001.5393253710098 1001.53822993586 28.32 2 0.1400589125747458 0.001131001131001131 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 40240 15211 HRIFEPNCL True PC9_epitope_Rep5 1127.5545985956699 1127.5529549037901 63.518 3 0.14005797478521506 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000493395.1_1_1:110201441-110203811:+|nuORF', 'ENST00000493171.5_1_1:110201318-110203873:+|nuORF'] 132347 19208 VYLTDPQGL True PC9_epitope_Rep2 1004.5178616504397 1004.51676993586 79.257 2 0.140055058809439 0.001131001131001131 0.9438714419765777 ['ENSG00000157353|ENST00000288078|FCSK', 'nc|ENSG00000157353|Q8N0W3-2|FCSK', 'ENST00000464499.5_1_16:70501260-70504246:+|nuORF'] 26098 8969 FHEPSQEL True PC9_epitope_Rep2 985.4505103666098 985.44940993586 39.855 2 0.14005331906285326 0.001131001131001131 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 25239 16237 FEDDEFVVY True H1975_Epitope_Rep2 1161.4866210918099 1161.48552993586 67.665 2 0.14005302425736307 0.001131001131001131 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 75789 10714 NRAQIQAVI True PC9_epitope_Rep2 1011.58252759567 1011.58142993586 46.527 2 0.14004661934899137 0.001131001131001131 0.9438714419765777 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 52308 11000 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54290993586 47.632 2 0.14004164876547465 0.001131001131001131 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 131844 7714 VYASDRATF True PC9_epitope_Rep6 1028.4927095317598 1028.4916099358602 39.018 2 0.14003514191691901 0.001131001131001131 0.9438714419765777 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 89208 7100 REIKFTVQA True H1975_Epitope_Rep2 1090.61349337078 1090.6123899358602 32.24 2 0.1400335191895481 0.001131001131001131 0.9438714419765777 ['ENSG00000109929|ENST00000264027|SC5D', 'ENST00000534455.5_1_11:121174081-121175207:+|nuORF', 'ENST00000531140.1_1_11:121174081-121177378:+|nuORF', 'ENST00000524683.5_1_11:121175009-121175207:+|nuORF'] 37754 10017 HAVGDIPGV True PC9_epitope_Rep6 863.45011644379 863.44900993586 49.098 2 0.14003260211454088 0.001131001131001131 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 17054 10594 EGPFYPTLR True H1975_Epitope_Rep3 1078.54474510462 1078.54364993586 45.819 2 0.1400312976647024 0.001131001131001131 0.9438714419765777 ['ENST00000487133.1_1_X:119739298-119742228:+|nuORF', 'nc|ENSG00000232119|Q9ULC4-2|MCTS1', 'ENSG00000232119|ENST00000371317|MCTS1', 'nc|ENSG00000232119|Q9ULC4-3|MCTS1'] 84562 16751 QHDFQAPYL True PC9_epitope_Rep1 1117.5192586327698 1117.5181699358602 69.26 2 0.14002533796482072 0.001131001131001131 0.9438714419765777 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 51865 6235 KKMQDTVVL True NCI_RA007_Epitope_Rep4 1060.5950664253198 1060.59396993586 30.588 2 0.14002193720893402 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 37586 7031 GYSFTTTAER True H1975_Epitope_Rep3 1131.51965255559 1131.5185499358602 32.008 2 0.1400110832754069 0.001131001131001131 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 35427 9286 GTDNGDLPSY True H1975_Epitope_Rep3 1037.43016884485 1037.42957496793 40.714 1 0.14000825369188527 0.001131001131001131 0.9438714419765777 ['ENSG00000135249|ENST00000257700|RINT1'] 138703 14967 YRVFTTQEL True PC9_epitope_Rep4 1155.5924235730297 1155.5913299358601 65.509 2 0.14000801256652823 0.001131001131001131 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1'] 28908 12400 FTEEQAVLY True H1975_Epitope_Rep1 1098.5233409536997 1098.52277496793 52.73 1 0.14000792881357213 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 4572 17048 ALAAALAHI True PC9_epitope_Rep5 849.50723739709 849.50614993586 70.593 2 0.13999980132394618 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21', 'ENSG00000107625|ENST00000373585|DDX50'] 112308 6089 TM[Oxidation]DNPTTTQY True H1975_Epitope_Rep2 1186.48121882198 1186.48012993586 28.396 2 0.13999618946993336 0.001131001131001131 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 64052 12728 LQDPNHLTL True PC9_epitope_Rep4 1049.55055876105 1049.54946993586 56.813 2 0.13999547757655428 0.001131001131001131 0.9438714419765777 ['KCTD21|p.H177R|1|0.41|ENSG00000188997|chr11:78174025-78174025|T/C|missense_variant', 'ENSG00000188997|ENST00000340067|KCTD21'] 115289 13883 TVDNVQPLLY True H1975_Epitope_Rep3 1160.607739284 1160.60717496793 58.71 1 0.13999208107806568 0.001131001131001131 0.9438714419765777 ['ENSG00000145332|ENST00000273963|KLHL8'] 52896 16860 KRGDVIYIL True PC9_epitope_Rep1 1075.6389798426299 1075.6378899358601 69.677 2 0.13998903241949315 0.001131001131001131 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENSG00000005020|ENST00000345317|SKAP2'] 70811 11010 MEENFAVEA True H1975_Epitope_Rep2 1038.4328116971399 1038.43227496793 47.377 1 0.1399881825204334 0.001131001131001131 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 70771 10269 MEEDSIRLPA True H1975_Epitope_Rep2 1159.55432381215 1159.5532299358601 44.507 2 0.1399854280458329 0.001131001131001131 0.9438714419765777 ['ENST00000541426.1_1_12:11803061-11978588:+|nuORF', 'ETV6-LOH12CR1|1|fusion', 'ETV6|p.E361Rfs*10|1|0.26|ENSG00000139083|chr12:11884514-11884514|G/-|frameshift_variant', 'ENSG00000139083|ENST00000396373|ETV6', 'ENST00000544715.1_1_12:11869674-11905524:+|nuORF'] 115707 20228 TVLEQVLPI True PC9_epitope_Rep6 1010.6011973515798 1010.60010993586 90.49 2 0.13998502940226693 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 54024 10618 KYLPESNTL True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 48.592 2 0.13997618074396703 0.001131001131001131 0.9438714419765777 ['ENST00000324677.11_1_17:28011643-28088245:-|nuORF', 'ENST00000269033.7_1_17:28011643-28257046:-|nuORF'] 66590 6557 LSSPATLNSR True PC9_epitope_Rep2 1044.5563724174801 1044.55526993586 30.634 2 0.13997543800013537 0.001131001131001131 0.9438714419765777 ['CON__P00761'] 133294 20661 WEMDNMLIQI True H1975_Epitope_Rep2 1291.59408044915 1291.59298993586 85.58 2 0.13997106891928038 0.001131001131001131 0.9438714419765777 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 21499 11631 ERQSQALIL True PC9_epitope_Rep4 1056.5927579262 1056.5916699358602 52.496 2 0.13996593092491805 0.001131001131001131 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188'] 27765 20368 FQEEDFPAL True PC9_epitope_Rep4 1094.4920408254197 1094.49147496793 86.49 1 0.1399611585368057 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 134890 14684 YADGESFLGY True H1975_Epitope_Rep3 1120.4713053808398 1120.47020993586 61.853 2 0.13995705015271176 0.001131001131001131 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 54035 11616 KYLSGIAHF True PC9_epitope_Rep6 1034.5549158654999 1034.55380993586 55.804 2 0.1399558113264894 0.001131001131001131 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF'] 67225 11745 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48127496793 50.169 1 0.13995458328747404 0.001131001131001131 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 61151 16155 LLDFSYEQY True H1975_Epitope_Rep2 1176.5339056373998 1176.53280993586 67.351 2 0.13994962858627055 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 109213 17872 TFTFSHATF True PC9_epitope_Rep2 1057.4868958753298 1057.48578993586 74.047 2 0.13994817455071243 0.001131001131001131 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 113709 11746 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 50.198 2 0.13994796498707177 0.001131001131001131 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 104867 15024 STEQIPILY True H1975_Epitope_Rep3 1062.5597264624198 1062.55917496793 63.181 1 0.13994502922096394 0.001131001131001131 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 7947 6914 ATDINGDDY True H1975_Epitope_Rep2 982.3879696796998 982.3874249679301 31.515 1 0.1399449272481097 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 48815 5306 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 25.462 2 0.13993714504866733 0.001131001131001131 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 131504 19045 VVVDPIQSV True PC9_epitope_Rep5 954.53859709502 954.53750993586 78.285 2 0.1399278889215929 0.001131001131001131 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 53707 9137 KYDPNVYSI True NCI_RA007_Epitope_Rep3 1097.53932537101 1097.53822993586 43.026 2 0.13992360645882682 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 48821 5290 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 25.428 2 0.13991610528800782 0.001131001131001131 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 132893 20174 VYTSVVEEL True PC9_epitope_Rep3 1037.5280919809697 1037.52698993586 82.855 2 0.13990229940601118 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 61286 18180 LLDTPAQLWY True H1975_Epitope_Rep3 1218.62847472858 1218.62736993586 76.185 2 0.1399013725622659 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF', 'ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 136572 9812 YHSSGGLEL True PC9_epitope_Rep4 961.4505103666099 961.44940993586 45.384 2 0.1398964890903411 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000463118.1_1_7:91729006-91736737:+|nuORF'] 37398 11608 GVYNGKTFNQV True PC9_epitope_Rep1 1225.60913626633 1225.60802993586 49.529 2 0.1398939780284099 0.001131001131001131 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 86374 8525 QQLGKVVQV True PC9_epitope_Rep6 997.5920296502098 997.59092993586 42.537 2 0.13989208960495575 0.001131001131001131 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 106925 9941 SYISRTNQL True PC9_epitope_Rep5 1080.5563724174801 1080.55526993586 43.212 2 0.13989182716575296 0.001131001131001131 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 8904 19771 AVGGLGSIIRV True PC9_epitope_Rep5 1040.6342288153598 1040.63312993586 81.094 2 0.1398917330220977 0.001131001131001131 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 31592 5468 GEFTSARAV True NCI_RA007_Epitope_Rep3 936.4664947839199 936.46538993586 28.516 2 0.13988847684607672 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 105299 16107 STTPYLQSV True PC9_epitope_Rep5 994.4971262058599 994.49602993586 66.945 2 0.13987829204651683 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000136108|Q8WWK9-6|CKAP2', 'ENSG00000136108|ENST00000258607|CKAP2', 'nc|ENSG00000136108|Q8WWK9|CKAP2'] 118914 3822 VEEPSRPSA True H1975_Epitope_Rep3 970.4719740871799 970.47086993586 19.8 2 0.1398769930974655 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'chr12:2868754-2872102|108|24.14|0.02|10.23|-|0|FOXM1,None|1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 11791 14634 DHIQTIDSL True PC9_epitope_Rep1 1040.51383889916 1040.51274993586 61.113 2 0.13987494928927477 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000101935|Q9Y4X0-4|AMMECR1', 'nc|ENSG00000101935|Q9Y4X0-3|AMMECR1', 'ENSG00000101935|ENST00000262844|AMMECR1'] 11655 13807 DHDGNIVEL True PC9_epitope_Rep4 1010.46688870674 1010.46578993586 61.005 2 0.13987362939853476 0.001131001131001131 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 123267 10434 VHQLSEEL True PC9_epitope_Rep5 953.4818104948899 953.48070993586 45.121 2 0.13986581848353238 0.001131001131001131 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 103351 12480 SQVEILQRV True PC9_epitope_Rep6 1070.6084079903399 1070.60730993586 59.426 2 0.1398647104489586 0.001131001131001131 0.9438714419765777 ['ENSG00000117318|ENST00000374561|ID3'] 70863 5398 MEGKVPVAA True H1975_Epitope_Rep3 900.4738886634798 900.4733349679301 25.829 1 0.1398632387179912 0.001131001131001131 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 43259 13021 IHDGLTVHL True PC9_epitope_Rep1 1003.54507945779 1003.5439899358599 54.955 2 0.1398589563157539 0.001131001131001131 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 136221 8468 YGNEVFLAK True H1975_Epitope_Rep1 1039.53384606775 1039.53274993586 37.501 2 0.13985805641506605 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 86614 10004 QRDQQLEAL True PC9_epitope_Rep3 1099.5621860739097 1099.56108993586 43.435 2 0.1398489659096844 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000090615|Q08378-2|GOLGA3', 'nc|ENSG00000090615|Q08378-4|GOLGA3', 'ENSG00000090615|ENST00000450791|GOLGA3'] 102157 14820 SPRPPLISV True PC9_epitope_Rep5 964.57056592964 964.56946993586 62.005 2 0.13984796569548347 0.001131001131001131 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 40610 11403 HTDVGLLEY True H1975_Epitope_Rep2 1045.50802524273 1045.5069299358602 48.911 2 0.13984101109991384 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF'] 46647 14468 ITVEKIIKI True PC9_epitope_Rep4 1055.69543208959 1055.6943299358602 63.562 2 0.13983645268443437 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 42359 8639 IELVSNSA True H1975_Epitope_Rep3 831.4337976733101 831.43324496793 38.225 1 0.13983406648696145 0.001131001131001131 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 2473 8626 AEQPSELVSA True H1975_Epitope_Rep1 1029.4978544818498 1029.49727496793 38.107 1 0.13983283485606915 0.001131001131001131 0.9438714419765777 ['ENSG00000183155|ENST00000367262|RABIF'] 105635 11194 SVFGTMPLK True NCI_RA007_Epitope_Rep1 978.5208388558999 978.51974993586 47.542 2 0.13982788944193225 0.001131001131001131 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 2446 4181 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 21.19 2 0.13981823030435317 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 104971 22520 STIANVWLV True PC9_epitope_Rep1 1001.55458151233 1001.5540749679301 91.425 1 0.1398161749389781 0.001131001131001131 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 109569 18060 THATQLLVL True PC9_epitope_Rep1 994.58113061334 994.58002993586 74.26 2 0.13980887794383945 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000476102.1_1_1:159900586-159913268:-|nuORF'] 47558 23025 IYMDTLNIF True PC9_epitope_Rep2 1128.5525329069999 1128.5514299358601 94.058 2 0.1397955924406318 0.001131001131001131 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 104566 5616 SSSKGSLGGGF True NCI_RA007_Epitope_Rep3 982.4719740871798 982.47086993586 29.083 2 0.13979555286961937 0.001131001131001131 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 59021 8541 LGAPQTHLGLK True PC9_epitope_Rep2 1133.6556925359298 1133.65405490379 38.214 3 0.1397887554943782 0.001131001131001131 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2', 'nc|ENSG00000115468|Q9BUP0-2|EFHD1', 'GIGYF2-EFHD1|2|fusion', 'ENSG00000115468|ENST00000264059|EFHD1'] 123111 20084 VHCGIIEPLM True PC9_epitope_Rep5 1110.55657274162 1110.5554699358602 82.303 2 0.13978605930093957 0.001131001131001131 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 6130 9643 APNLQNQQV True PC9_epitope_Rep5 1010.5145076055 1010.51340993586 42.058 2 0.13977468832679393 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 137336 21546 YLITLLEHL True PC9_epitope_Rep4 1113.64339651673 1113.6422899358602 91.056 2 0.13977033980033202 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 1965 5630 AEIRAINEA True H1975_Epitope_Rep3 985.51925863277 985.51816993586 26.693 2 0.139769558077065 0.001131001131001131 0.9438714419765777 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 13196 20082 DLTDYLMK True PC9_epitope_Rep2 997.47903361357 997.47792993586 82.653 2 0.13976660768191485 0.001131001131001131 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 116232 20274 TVTTVILEV True PC9_epitope_Rep4 973.5695628701299 973.56901496793 86.126 1 0.13976262347902363 0.001131001131001131 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 29356 22353 FVEETVYLL True PC9_epitope_Rep5 1111.58012755383 1111.57902993586 90.99 2 0.13975882069785647 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 17370 16542 EHEDVIQIV True PC9_epitope_Rep1 1080.54513902744 1080.5440499358601 68.453 2 0.13975725230866382 0.001131001131001131 0.9438714419765777 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF', 'ENST00000497744.1_1_17:18007908-18010551:+|nuORF'] 105636 10448 SVFGTMPLK True NCI_RA007_Epitope_Rep3 978.5208388558999 978.51974993586 48.161 2 0.13975663948270875 0.001131001131001131 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 89625 9247 RETETVFVP True H1975_Epitope_Rep3 1076.5502244078798 1076.5496749679298 40.56 1 0.13974865158960917 0.001131001131001131 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 48753 6418 KEQEPMPTV True H1975_Epitope_Rep2 1057.5113963710098 1057.51028993586 29.609 2 0.13974835829998025 0.001131001131001131 0.9438714419765777 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2', 'WDR18-HN1L|1|fusion'] 6871 13640 AQIGSYVHV True PC9_epitope_Rep5 972.50288029264 972.50178993586 57.489 2 0.13974684312057767 0.001131001131001131 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 96723 11297 SEQFETVAV True H1975_Epitope_Rep2 1008.4763907612798 1008.47528993586 48.501 2 0.13972246997582735 0.001131001131001131 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2', 'TGFBR2|p.K277E|1|0.47|ENSG00000163513|chr3:30672012-30672012|A/G|missense_variant'] 13866 20466 DRDDFPVVL True PC9_epitope_Rep2 1074.53457434374 1074.53346993586 84.151 2 0.13971860006791506 0.001131001131001131 0.9438714419765777 ['ENSG00000126458|ENST00000246792|RRAS'] 106440 18543 SVVAAVQGL True PC9_epitope_Rep5 842.48616759934 842.48506993586 76.349 2 0.13971644583705783 0.001131001131001131 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 109853 15172 THMAPEVVL True PC9_epitope_Rep3 995.51100244819 995.50990993586 63.502 2 0.13971444948373865 0.001131001131001131 0.9438714419765777 ['MAP3K14|p.L634*|1|0.1|ENSG00000006062|chr17:45270486-45270486|C/-|frameshift_variant', 'ENSG00000006062|ENST00000344686|MAP3K14', 'ENST00000586644.1_1_17:43348295-43350966:-|nuORF', 'ENST00000592267.1_1_17:43342005-43351146:-|nuORF'] 110450 15548 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.53308993586 64.63 2 0.13971156558580072 0.001131001131001131 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 4349 5587 AINVNDSVTK True NCI_RA007_Epitope_Rep2 1059.5560380643099 1059.5549499358601 26.347 2 0.139707056699982 0.001131001131001131 0.9438714419765777 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY'] 17200 15206 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 63.753 2 0.13970680212860034 0.001131001131001131 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 49060 14848 KFNPVSFTW True NCI_RA007_Epitope_Rep4 1124.5654805492 1124.5643899358602 64.575 2 0.13970151098051495 0.001131001131001131 0.9438714419765777 ['ENSG00000124702|ENST00000326974|KLHDC3'] 7226 10094 ARDSTVLRL True PC9_epitope_Rep5 1029.5930922793698 1029.59198993586 43.809 2 0.13969941465036081 0.001131001131001131 0.9438714419765777 ['PNPLA6|p.D881Tfs*24|1|0.35|ENSG00000032444|chr19:7554696-7554696|G/-|frameshift_variant', 'ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 40732 13209 HTVEDLVKV True PC9_epitope_Rep3 1038.5709598524597 1038.5698699358602 55.844 2 0.1396992808426124 0.001131001131001131 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 26544 19696 FIVHTIEEI True PC9_epitope_Rep3 1099.5913609438699 1099.59026993586 80.991 2 0.13969760209457924 0.001131001131001131 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 56794 6669 LEATSAVSA True H1975_Epitope_Rep3 847.4287122928699 847.42816496793 30.606 1 0.13968485958875562 0.001131001131001131 0.9438714419765777 ['ENSG00000205208|ENST00000379205|C4orf46', 'ENST00000508836.1_1_4:159590767-159593157:-|nuORF'] 21022 11908 ERATNIEVL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 51.128 2 0.13967293372423534 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 34718 15268 GQMKMFQEV True PC9_epitope_Rep5 1096.5045371687597 1096.5034299358601 63.738 2 0.13966553889864297 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'ENST00000503773.6_1_5:55236912-55256289:-|nuORF'] 53305 9708 KTLTGKTITL True PC9_epitope_Rep5 1074.6648602373 1074.66376993586 42.31 2 0.13966541355744394 0.001131001131001131 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 132218 6849 VYKPAQNSW True NCI_RA007_Epitope_Rep5 1091.5399940773498 1091.5388899358602 33.029 2 0.13965970102634703 0.001131001131001131 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 86498 15607 QRAAVIGDVI True PC9_epitope_Rep1 1040.5978433066398 1040.59674993586 64.853 2 0.139655803495853 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 102051 8147 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 36.694 2 0.13965411560828453 0.001131001131001131 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 96307 7908 SEETPLTAA True H1975_Epitope_Rep2 917.4341915961298 917.43364496793 35.366 1 0.13965218492359815 0.001131001131001131 0.9438714419765777 ['ENSG00000182154|ENST00000371443|MRPL41'] 28055 21491 FRDFIPVVL True PC9_epitope_Rep2 1104.6331661861998 1104.63206993586 88.135 2 0.13965017226014087 0.001131001131001131 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 104890 4737 STFDTQITKK True NCI_RA007_Epitope_Rep4 1167.6135529404298 1167.61189490379 24.655 3 0.13964508198847286 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 135175 9360 YASSANLHLPK True PC9_epitope_Rep5 1199.62987171091 1199.62822490379 40.958 3 0.13963648235246948 0.001131001131001131 0.9438714419765777 ['CON__P34955'] 137020 5288 YKPLDLRPK True NCI_RA007_Epitope_Rep5 1128.6655289436399 1128.6638849037902 27.036 3 0.13963357331670537 0.001131001131001131 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000373570.8_1_9:127620199-127620799:-|nuORF'] 114813 19711 TTDFIFNLY True H1975_Epitope_Rep1 1132.54407639828 1132.5429699358601 82.043 2 0.13962398760508446 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 104221 10253 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep2 1071.45427579815 1071.4531699358602 44.445 2 0.13961739542063314 0.001131001131001131 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 2715 11502 AETLSSWEA True H1975_Epitope_Rep2 992.445090633 992.44454496793 49.3 1 0.13961692539715784 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 1357 7130 AEEEAAVVAA True H1975_Epitope_Rep2 958.4607406971397 958.4596499358599 32.358 2 0.139615714721791 0.001131001131001131 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 139393 7217 YTEEDAASY True H1975_Epitope_Rep2 1047.40328539067 1047.4027749679299 32.694 1 0.13961555481894897 0.001131001131001131 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 9481 4095 AVYGGFKSK True NCI_RA007_Epitope_Rep4 955.51271670035 955.51160993586 22.028 2 0.13961533742803783 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000196616|P00325-2|ADH1B', 'ENSG00000196616|ENST00000305046|ADH1B'] 24018 23118 EYPFILDAF True PC9_epitope_Rep4 1113.5382627418498 1113.5371699358602 97.143 2 0.13961273648779235 0.001131001131001131 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 2390 11817 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.50618993586 50.53 2 0.13960640469741367 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 74343 6525 NIPVSQVNPR True NCI_RA007_Epitope_Rep2 1122.61455599994 1122.6134499358602 29.991 2 0.13959877145138636 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3'] 30053 14132 FYLEGGFSKF True NCI_RA007_Epitope_Rep3 1193.57571087973 1193.57460993586 62.878 2 0.13959600724803853 0.001131001131001131 0.9438714419765777 ['ENSG00000139318|ENST00000279488|DUSP6'] 136587 15588 YHVNFSQAI True PC9_epitope_Rep2 1077.52434401321 1077.5232499358601 65.236 2 0.13959180139539584 0.001131001131001131 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'NFE2L3|p.L356Ffs*6|1|0.39|ENSG00000050344|chr7:26184762-26184762|C/-|frameshift_variant', 'NFE2L3|p.A398Qfs*3|1|0.16|ENSG00000050344|chr7:26184890-26184900|GCCACAGAAGA/-|frameshift_variant'] 29713 17053 FVPEIFHRI True PC9_epitope_Rep4 1156.6393141958 1156.63765490379 73.588 3 0.1395880417955099 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 6297 4965 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 24.465 2 0.13958612749612842 0.001131001131001131 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 132786 11597 VYSQIPAAVKL True NCI_RA007_Epitope_Rep4 1187.6914093383098 1187.6903099358601 51.555 2 0.13958512277744597 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 52670 13720 KQFGNILIL True NCI_RA007_Epitope_Rep3 1044.6331661861998 1044.63206993586 61.289 2 0.1395850700962741 0.001131001131001131 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'SMS|p.G166W|1|0.32|ENSG00000102172|chrX:21977227-21977227|G/T|missense_variant', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 7324 8045 ARSPTNSLL True PC9_epitope_Rep4 957.52434401321 957.52324993586 38.396 2 0.13958355618253449 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000183864|Q14106-2|TOB2', 'ENSG00000183864|ENST00000327492|TOB2'] 18978 20343 ELFTGFIKV True PC9_epitope_Rep4 1052.5906326678798 1052.5895299358601 86.395 2 0.1395783467550401 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64897669-64899838:-|nuORF'] 70337 17241 LYPQFMFHL True NCI_RA007_Epitope_Rep4 1194.5895871220598 1194.58848993586 74.649 2 0.1395766572061186 0.001131001131001131 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 106898 19517 SYIPLFPQL True NCI_RA007_Epitope_Rep4 1076.5906326678798 1076.5895299358601 84.336 2 0.1395759364167387 0.001131001131001131 0.9438714419765777 ['ENSG00000165996|ENST00000361271|HACD1'] 68725 16680 LVDEWLDSY True H1975_Epitope_Rep3 1138.51825557326 1138.51714993586 69.68 2 0.1395733217307635 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 11711 21242 DHFLSNLL True PC9_epitope_Rep1 957.49198125577 957.49088993586 86.532 2 0.13956717219692852 0.001131001131001131 0.9438714419765777 ['ENST00000561691.5_1_15:43691337-43697409:+|nuORF', 'ENST00000563963.1_1_15:43687726-43694213:+|nuORF', 'ENSG00000137822|ENST00000564079|TUBGCP4', 'nc|ENSG00000137822|Q9UGJ1|TUBGCP4'] 83760 12093 QEDVRLIGL True H1975_Epitope_Rep3 1041.5818588893299 1041.5807699358602 51.68 2 0.13955982438174455 0.001131001131001131 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 113579 9771 TRADTTTIL True PC9_epitope_Rep1 990.53457434374 990.53346993586 42.445 2 0.13955800052493025 0.001131001131001131 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 44825 19881 IPVSGITVV True PC9_epitope_Rep5 883.53786881903 883.53676993586 81.525 2 0.13955727711158566 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 127019 5504 VPYGVGKAA True PC9_epitope_Rep2 860.4756029156398 860.4745099358599 26.564 2 0.13955501962349165 0.001131001131001131 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 138316 18158 YRAPELML True PC9_epitope_Rep5 991.5160878286299 991.51498993586 74.854 2 0.13955018007475817 0.001131001131001131 0.9438714419765777 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 7428 9198 ASDAAPLQY True H1975_Epitope_Rep3 934.43961132974 934.4390649679301 40.372 1 0.1395410345796081 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 70539 21363 LYTPVLIRF True PC9_epitope_Rep1 1120.66446631448 1120.6633699358601 87.004 2 0.13953736190985355 0.001131001131001131 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 131098 15846 VVMQEGLAHI True PC9_epitope_Rep3 1095.5746653339097 1095.5735699358602 66.104 2 0.13952480894039937 0.001131001131001131 0.9438714419765777 ['ENSG00000152684|ENST00000274311|PELO'] 96781 15877 SEQYYIIEV True H1975_Epitope_Rep2 1142.54955570154 1142.5484499358602 66.27 2 0.1395238145912343 0.001131001131001131 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 41980 7270 IEDGKAVIP True H1975_Epitope_Rep2 940.5229470308799 940.52184993586 32.9 2 0.1395236491103743 0.001131001131001131 0.9438714419765777 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant'] 114304 8344 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.5853349679301 38.768 1 0.13952135246856565 0.001131001131001131 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 85085 5571 QIQDSIVTK True NCI_RA007_Epitope_Rep3 1030.56587447202 1030.56476993586 28.906 2 0.13951614185452033 0.001131001131001131 0.9438714419765777 ['ENSG00000196466|ENST00000430385|ZNF799', 'nc|ENSG00000196466|Q96GE5-2|ZNF799', 'ENSG00000180855|ENST00000301547|ZNF443'] 35196 17731 GSDVVDWLY True H1975_Epitope_Rep3 1052.48147614172 1052.48097496793 74.129 1 0.13951300513753614 0.001131001131001131 0.9438714419765777 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'DVL3|p.H453Y|1|0.13|ENSG00000161202|chr3:184167924-184167924|C/T|missense_variant', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 137466 21200 YLPDSLTQL True PC9_epitope_Rep5 1048.54407639828 1048.5429699358601 86.593 2 0.13951241600952222 0.001131001131001131 0.9438714419765777 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 72415 10328 MTEPIDEY True H1975_Epitope_Rep2 996.4110136233999 996.41046496793 44.735 1 0.1395045399197136 0.001131001131001131 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 26727 21757 FLDGNELTL True PC9_epitope_Rep1 1020.51277627 1020.51227496793 88.522 1 0.1395000677717664 0.001131001131001131 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 20975 20664 ERADLIAYL True PC9_epitope_Rep5 1062.57095985246 1062.5703749679299 84.538 1 0.13949949708718912 0.001131001131001131 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 41038 19084 HYILHNSFF True PC9_epitope_Rep1 1176.5716285587998 1176.5705299358601 78.197 2 0.13949582642511904 0.001131001131001131 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 107347 16509 SYRQVAFDF True PC9_epitope_Rep6 1131.5349086969097 1131.53380993586 75.933 2 0.13949582541093378 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 38758 7434 HHYEGAVVI True PC9_epitope_Rep6 1023.5137793295098 1023.5126899358601 37.825 2 0.13949157462972095 0.001131001131001131 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 30110 20635 FYPPKVELF True PC9_epitope_Rep3 1138.60628273202 1138.6051899358602 84.643 2 0.1394891165710106 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 83975 7478 QELPTQPEA True NCI_RA007_Epitope_Rep4 1011.48728979815 1011.48618993586 35.41 2 0.13948754896488189 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000059122|Q4VC44-3|FLYWCH1', 'nc|ENSG00000059122|Q4VC44-4|FLYWCH1', 'nc|ENSG00000059122|Q4VC44-2|FLYWCH1', 'ENSG00000059122|ENST00000253928|FLYWCH1'] 6985 5829 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep4 935.4348606187698 935.43431496793 29.045 1 0.13948411189050952 0.001131001131001131 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 67385 20177 LTDTTILQV True PC9_epitope_Rep2 1002.5597264624199 1002.55862993586 83.026 2 0.13947485437271917 0.001131001131001131 0.9438714419765777 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 28386 4507 FSDSKIQKY True H1975_Epitope_Rep2 1114.56587447202 1114.56476993586 22.448 2 0.13947369135547225 0.001131001131001131 0.9438714419765777 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL', 'ENST00000514335.1_1_5:37051847-37064632:+|nuORF'] 75639 16859 NQSEKIFSL True PC9_epitope_Rep3 1064.55022440788 1064.54912993586 70.001 2 0.13947304363201873 0.001131001131001131 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426'] 139420 13573 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep1 1147.5107280451098 1147.51017496793 57.335 1 0.13947150486019885 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 96224 4883 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 23.867 2 0.13947121591076522 0.001131001131001131 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 1625 8911 AEFVEVTK True PC9_epitope_Rep1 921.4807478657299 921.47964993586 39.115 2 0.139468750562641 0.001131001131001131 0.9438714419765777 ['CON__P02769'] 88913 4595 RECTIEATA True NCI_RA007_Epitope_Rep3 992.4596951513198 992.45858993586 24.975 2 0.1394644427929313 0.001131001131001131 0.9438714419765777 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 71931 11190 MPSSVPLRA True PC9_epitope_Rep1 956.5113368013599 956.51022993586 47.924 2 0.13945937534439448 0.001131001131001131 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 105919 16217 SVLDSFLKY True NCI_RA007_Epitope_Rep5 1070.5648118428599 1070.56370993586 69.125 2 0.13945904490934832 0.001131001131001131 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 3980 21511 AHFDGLIFV True PC9_epitope_Rep1 1017.5283667644899 1017.52726993586 87.577 2 0.13945551832155295 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 14822 16133 DYDSVFHHL True PC9_epitope_Rep2 1131.4985231881901 1131.49742993586 67.314 2 0.13944793783604642 0.001131001131001131 0.9438714419765777 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 89678 5194 REVQGFESA True NCI_RA007_Epitope_Rep5 1021.4828731240499 1021.48176993586 26.674 2 0.13944319572493172 0.001131001131001131 0.9438714419765777 ['ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14'] 115293 17191 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54427496793 71.579 1 0.13944016098257356 0.001131001131001131 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 61593 19525 LLGPRLVLA True PC9_epitope_Rep5 950.6276868829399 950.62658993586 80.155 2 0.13943939515608972 0.001131001131001131 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 7429 9127 ASDDFDQASY True H1975_Epitope_Rep1 1117.4199980839699 1117.41947496793 40.012 1 0.1394354436296762 0.001131001131001131 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 34466 12225 GQDEPLIHV True PC9_epitope_Rep6 1006.5083595958998 1006.50726993586 58.397 2 0.13943180080756434 0.001131001131001131 0.9438714419765777 ['ENSG00000157778|ENST00000288607|PSMG3'] 64580 14154 LRDSFQQVV True PC9_epitope_Rep3 1090.57710786206 1090.5760099358602 59.526 2 0.13942845299730242 0.001131001131001131 0.9438714419765777 ['ARNT|p.R595Pfs*9|1|0.14|ENSG00000143437|chr1:150816806-150816807|-/G|frameshift_variant', 'nc|ENSG00000143437|P27540-2|ARNT', 'nc|ENSG00000143437|P27540-3|ARNT', 'nc|ENSG00000143437|P27540-4|ARNT', 'ENSG00000143437|ENST00000358595|ARNT'] 86102 11731 QPQPQPYAV True PC9_epitope_Rep1 1026.5134449763398 1026.5123499358601 49.998 2 0.13942663819848247 0.001131001131001131 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 104305 16673 SSELFTLTY True H1975_Epitope_Rep2 1059.51244191683 1059.51187496793 69.367 1 0.13942397328386322 0.001131001131001131 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 138196 10816 YQRADFVL True NCI_RA007_Epitope_Rep5 1010.5185303567798 1010.51742993586 48.238 2 0.13942313684924224 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF', 'FKBP8|p.A241V|1|0.13|ENSG00000105701|chr19:18538263-18538263|G/A|missense_variant'] 40376 4228 HRTELETKL True PC9_epitope_Rep6 1125.61422164677 1125.61258490379 23.237 3 0.13942070329707398 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 9743 9124 AYLEAHETF True NCI_RA007_Epitope_Rep4 1079.4923751785898 1079.4912699358601 41.936 2 0.13942000032557605 0.001131001131001131 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 112207 14244 TLVYHVVGV True PC9_epitope_Rep6 985.5596668927699 985.55856993586 66.681 2 0.13941709452435183 0.001131001131001131 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 95282 20934 SADTTILFV True PC9_epitope_Rep4 965.50696261357 965.50586993586 88.682 2 0.13941606824381275 0.001131001131001131 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 45166 17482 IRDNFVIVY True PC9_epitope_Rep6 1137.61824439805 1137.6171499358602 79.871 2 0.13941488417873152 0.001131001131001131 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 60335 20574 LIGEFLEKV True PC9_epitope_Rep5 1046.60119735158 1046.60010993586 84.185 2 0.13941219003629093 0.001131001131001131 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 94969 14172 RYPTSIASLAF True NCI_RA007_Epitope_Rep4 1224.65027280232 1224.64916993586 61.792 2 0.1394048589986296 0.001131001131001131 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 96222 4693 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 23.146 2 0.1394016675725099 0.001131001131001131 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 83704 5697 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 26.91 2 0.13939909057934977 0.001131001131001131 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 64575 9023 LRDQSAVVV True PC9_epitope_Rep3 985.5556441414899 985.55454993586 39.65 2 0.13939840899714048 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 53465 18251 KVIEINPYL True PC9_epitope_Rep2 1087.62774645259 1087.62664993586 75.522 2 0.13938554196083602 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'PSMB8|p.G115V|1|0.5|ENSG00000204264|chr6:32842735-32842735|C/A|missense_variant', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 26781 6743 FLDSRHLDHY True H1975_Epitope_Rep1 1301.6152842759302 1301.61364490379 30.979 3 0.13938450200703775 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6', 'nc|ENSG00000116675|O75061-3|DNAJC6'] 87819 20059 QVIPQFQTV True PC9_epitope_Rep3 1058.5760452328998 1058.57494993586 82.406 2 0.1393800140729737 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 46187 8692 ITDHGSLIY True H1975_Epitope_Rep3 1017.51311062317 1017.51257496793 38.432 1 0.13937525938480794 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 3905 14515 AHDDSVMYL True PC9_epitope_Rep2 1049.44879611445 1049.4476899358601 61.102 2 0.13937142336872582 0.001131001131001131 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 113880 10496 TRHPENWTL True PC9_epitope_Rep1 1152.56760580752 1152.56650993586 45.262 2 0.13937000979854203 0.001131001131001131 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 45153 19390 IRDLNIVVV True PC9_epitope_Rep1 1039.6389798426299 1039.6378899358601 79.395 2 0.13936922314634675 0.001131001131001131 0.9438714419765777 ['ATL2|p.K282Nfs*32|1|0.35|ENSG00000119787|chr2:38310406-38310406|C/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'ENST00000474535.2_1_2:38545640-38570535:-|nuORF'] 35158 6630 GSDCTTIHY True H1975_Epitope_Rep2 995.4018459220301 995.40074993586 30.41 2 0.13936499742329433 0.001131001131001131 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.Y236C|3|0.43|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 93933 16288 RVLDELTLA True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 75.013 2 0.13936490353485473 0.001131001131001131 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 86290 15936 QQDYFPKAL True PC9_epitope_Rep2 1108.5553097883198 1108.5542099358602 66.545 2 0.13936247211751082 0.001131001131001131 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 132332 22921 VYLPTAFLL True PC9_epitope_Rep4 1035.60046907559 1035.59936993586 96.385 2 0.13936095764741654 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000177054|Q8IUH4-2|ZDHHC13', 'nc|ENSG00000177054|Q8IUH4-3|ZDHHC13', 'ENST00000525490.5_1_11:19138758-19188042:+|nuORF', 'ENSG00000177054|ENST00000446113|ZDHHC13'] 48925 7811 KEYAVNEVV True H1975_Epitope_Rep2 1049.53932537101 1049.53822993586 34.992 2 0.13935762812028543 0.001131001131001131 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 19420 15447 ELPKHYFSF True PC9_epitope_Rep4 1166.5760452329 1166.57494993586 67.349 2 0.1393542876163623 0.001131001131001131 0.9438714419765777 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 105108 10109 STLPAITLK True NCI_RA007_Epitope_Rep5 942.5749826037401 942.57388993586 45.519 2 0.1393490284654047 0.001131001131001131 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 104728 9166 STDKAEYTFY True H1975_Epitope_Rep1 1223.53463391339 1223.53352993586 40.162 2 0.13933784750449302 0.001131001131001131 0.9438714419765777 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ'] 101538 13512 SPAPPLLHV True PC9_epitope_Rep6 929.53345214493 929.53234993586 63.695 2 0.13933279787649552 0.001131001131001131 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 113216 20563 TQDSSILPL True PC9_epitope_Rep5 972.5127762699999 972.51222496793 84.14 1 0.13932777527325935 0.001131001131001131 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 138387 13834 YRDNYQAFC True PC9_epitope_Rep5 1178.48149322506 1178.48038993586 58.233 2 0.13932593294131923 0.001131001131001131 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 28188 12218 FRPLYTHEY True PC9_epitope_Rep5 1224.5927579261997 1224.59110490379 51.984 3 0.13932543241194106 0.001131001131001131 0.9438714419765777 ['ENSG00000008952|ENST00000337002|SEC62'] 6328 5444 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 27.678 2 0.13932266018806352 0.001131001131001131 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 47323 13686 IYGYVAEQF True NCI_RA007_Epitope_Rep3 1088.5178616504397 1088.51676993586 61.145 2 0.13931573762545865 0.001131001131001131 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 91662 20521 RPFTIPYLTA True PC9_epitope_Rep2 1177.64954452633 1177.64844993586 84.364 2 0.13931440420228963 0.001131001131001131 0.9438714419765777 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8', 'nc|ENSG00000137413|Q7Z7C8-4|TAF8'] 65001 7151 LSDGVAVLK True NCI_RA007_Epitope_Rep3 900.5280324113199 900.52692993586 35.246 2 0.1393125008029137 0.001131001131001131 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 8423 5973 ATQVAVSVPK True NCI_RA007_Epitope_Rep5 998.5760452328999 998.57494993586 29.659 2 0.13931214703659012 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 28309 14725 FRYPTTEEL True PC9_epitope_Rep4 1154.5607890915799 1154.5596899358602 64.574 2 0.139310320565294 0.001131001131001131 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 73836 10118 NHEDKIRVVL True PC9_epitope_Rep1 1221.6829699129298 1221.68131490379 43.792 3 0.1393097654144202 0.001131001131001131 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1'] 118214 15462 VAYEEFEKV True PC9_epitope_Rep3 1112.5389910178399 1112.5378899358602 64.626 2 0.13930964868964477 0.001131001131001131 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 28428 12983 FSEEHYIFY True H1975_Epitope_Rep3 1233.5342399905699 1233.5331499358601 55.173 2 0.1393028975920289 0.001131001131001131 0.9438714419765777 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'nc|ENSG00000145715|P20936-2|RASA1', 'nc|ENSG00000145715|P20936-4|RASA1'] 43450 13370 IHSSIVSTL True PC9_epitope_Rep5 955.5338460677501 955.53274993586 56.444 2 0.1392938944621358 0.001131001131001131 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 110038 11523 THVSDTSVVL True PC9_epitope_Rep1 1056.54513902744 1056.5440499358601 49.202 2 0.1392935551907272 0.001131001131001131 0.9438714419765777 ['ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q922U2'] 2992 20750 AFMKGVFTF True PC9_epitope_Rep2 1046.5259242363397 1046.52482993586 85.255 2 0.1392924692435976 0.001131001131001131 0.9438714419765777 ['ENST00000489739.1_1_9:139685858-139686514:+|nuORF', 'ENST00000465017.5_1_9:139685862-139687281:+|nuORF', 'ENSG00000244187|ENST00000290079|TMEM141'] 694 15758 AAVEWFDGK True PC9_epitope_Rep5 1021.4868958753298 1021.48578993586 65.609 2 0.1392912436369323 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 8170 9427 ATGDMSGLLK True NCI_RA007_Epitope_Rep1 991.5008316873099 991.49972993586 40.663 2 0.13929074291105054 0.001131001131001131 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 30402 6758 GAFGKPSSL True H1975_Epitope_Rep2 862.45486747106 862.45376993586 30.909 2 0.1392876492479282 0.001131001131001131 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 92180 9715 RQFLIHEL True NCI_RA007_Epitope_Rep4 1054.59236400338 1054.59126993586 44.214 2 0.13928233773788515 0.001131001131001131 0.9438714419765777 ['ENSG00000133393|ENST00000255759|CEP20'] 109410 21524 TGPTRFFLF True PC9_epitope_Rep5 1084.5705659296398 1084.56946993586 87.828 2 0.13928057719932738 0.001131001131001131 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 27629 21173 FQAEIAQLM True PC9_epitope_Rep2 1049.52156713189 1049.52046993586 86.897 2 0.13927854885220411 0.001131001131001131 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 2475 8830 AEQPSELVSA True H1975_Epitope_Rep2 1029.4978544818498 1029.49727496793 38.932 1 0.1392677839605948 0.001131001131001131 0.9438714419765777 ['ENSG00000183155|ENST00000367262|RABIF'] 105060 6335 STITGVMDK True NCI_RA007_Epitope_Rep4 950.4742825863 950.47318993586 30.973 2 0.13926418080037103 0.001131001131001131 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 25397 9260 FEIPTKETP True H1975_Epitope_Rep2 1060.54407639828 1060.5429699358601 40.576 2 0.13926247031459058 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B'] 29472 21997 FVIDGFDEL True PC9_epitope_Rep4 1053.50187723313 1053.5007899358602 92.833 2 0.1392580913377962 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 113214 19716 TQDSSILPL True PC9_epitope_Rep4 972.5127762699999 972.51166993586 83.962 2 0.13925242094524307 0.001131001131001131 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 81753 14294 PSDLTVGQFY True H1975_Epitope_Rep1 1125.5342399905699 1125.53367496793 60.168 1 0.13924789028847687 0.001131001131001131 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1'] 63315 8869 LPDGYEFK True H1975_Epitope_Rep3 967.4650978015899 967.46400993586 39.116 2 0.13924633294699507 0.001131001131001131 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF', 'LGALS1|p.K100R|1|0.22|ENSG00000100097|chr22:37679640-37679640|A/G|missense_variant'] 129282 4799 VTDRDIDRY True H1975_Epitope_Rep3 1151.55710069347 1151.55544490379 23.587 3 0.1392350436998651 0.001131001131001131 0.9438714419765777 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 103484 5204 SRAPSVATV True PC9_epitope_Rep4 886.4872302285 886.48612993586 26.718 2 0.1392332832169366 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 7968 15444 ATDLDVANFY True H1975_Epitope_Rep2 1127.51350454599 1127.51297496793 64.561 1 0.13922539919375312 0.001131001131001131 0.9438714419765777 ['ENSG00000142252|ENST00000270257|GEMIN7'] 126377 21959 VPLEFPVVA True PC9_epitope_Rep1 969.5535188831699 969.55242993586 89.283 2 0.1392152952866315 0.001131001131001131 0.9438714419765777 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 85142 10170 QITVNDLPVGR True NCI_RA007_Epitope_Rep5 1210.6669854956199 1210.6658899358602 45.752 2 0.13921340245264985 0.001131001131001131 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 52303 12041 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54290993586 51.175 2 0.1392124086429885 0.001131001131001131 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 132984 19261 VYVEKISFL True PC9_epitope_Rep4 1096.6168474157198 1096.61574993586 82.19 2 0.13921196754505277 0.001131001131001131 0.9438714419765777 ['ENSG00000171017|ENST00000306708|LRRC8E'] 113857 12304 TREGGSIPVTL True PC9_epitope_Rep6 1128.6138872935999 1128.61278993586 58.719 2 0.13920819196984702 0.001131001131001131 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 132619 8904 VYPSSLSKI True NCI_RA007_Epitope_Rep4 992.5542471591599 992.55314993586 41.079 2 0.13919849239888082 0.001131001131001131 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 103760 9099 SRFLNKQPY True PC9_epitope_Rep5 1151.60874234351 1151.60710490379 39.945 3 0.13919595450510422 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'ENST00000484855.2_1_20:44526619-44527086:+|nuORF'] 64771 14501 LRSDSYVEL True PC9_epitope_Rep1 1080.54513902744 1080.5440499358601 60.604 2 0.13919327655389882 0.001131001131001131 0.9438714419765777 ['ENST00000463783.1_1_3:196666081-196669374:-|nuORF', 'nc|ENSG00000114503|P52298-3|NCBP2', 'ENSG00000114503|ENST00000321256|NCBP2', 'ENST00000468923.5_1_3:196664263-196669374:-|nuORF'] 48868 11546 KESYSIYVYK True PC9_epitope_Rep1 1278.6496040959798 1278.6479549037902 49.29 3 0.13919138384032734 0.001131001131001131 0.9438714419765777 ['ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'nc|ENSG00000220323|Q6DRA6|H2BC19P', 'nc|ENSG00000261716|Q6DN03|H2BC20P', 'ENSG00000196890|ENST00000693095|H2BC26'] 31562 8874 GEFRQGLISA True NCI_RA007_Epitope_Rep5 1076.56145779792 1076.56036993586 40.798 2 0.1391888958152845 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 70830 6482 MEESTNGSLAA True H1975_Epitope_Rep3 1108.47065375784 1108.4695499358602 29.901 2 0.1391863184095707 0.001131001131001131 0.9438714419765777 ['STAT1|p.D627Tfs*31|1|0.13|ENSG00000115415|chr2:190976999-190977020|AGGGTTCAACCGCATGGAAGTC/-|frameshift_variant', 'nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 13868 19749 DRDDFPVVL True PC9_epitope_Rep4 1074.53457434374 1074.53346993586 84.088 2 0.13918331261260097 0.001131001131001131 0.9438714419765777 ['ENSG00000126458|ENST00000246792|RRAS'] 75364 12876 NQDDSILKV True PC9_epitope_Rep2 1030.5294889632999 1030.52838993586 54.827 2 0.13918248906541494 0.001131001131001131 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 73788 15071 NHDSRLWSL True PC9_epitope_Rep1 1126.55195574338 1126.55084993586 62.79 2 0.13918110494471356 0.001131001131001131 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 135702 17379 YEILTPNSIPK True PC9_epitope_Rep1 1273.69180326113 1273.69070993586 71.655 2 0.13915786128180846 0.001131001131001131 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 70218 23806 LYLPSFFTY True PC9_epitope_Rep5 1149.57464825057 1149.57354993586 96.551 2 0.13914456220295873 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 35823 17212 GTYTGFIKV True PC9_epitope_Rep5 984.5280324113198 984.52692993586 71.226 2 0.1391438516762426 0.001131001131001131 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 9303 11153 AVSDGVIKV True PC9_epitope_Rep2 886.5123823471799 886.51128993586 48.226 2 0.13913729800926947 0.001131001131001131 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 54180 14472 KYPDIISRI True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 63.577 2 0.1391307585209727 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 23313 4991 EVSSATNALR True NCI_RA007_Epitope_Rep1 1046.5356369729 1046.53452993586 23.498 2 0.13912919259132805 0.001131001131001131 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF'] 98426 21874 SIIQRLLEV True PC9_epitope_Rep3 1069.64954452633 1069.64844993586 89.441 2 0.13912473357062646 0.001131001131001131 0.9438714419765777 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 96641 11846 SENFEELLK True H1975_Epitope_Rep3 1107.54480467427 1107.54370993586 50.714 2 0.13912318583530542 0.001131001131001131 0.9438714419765777 ['CRABP2|p.R12Q|1|0.27|ENSG00000143320|chr1:156705412-156705412|C/T|missense_variant', 'ENSG00000143320|ENST00000368222|CRABP2'] 14948 9301 DYPLEAVR True H1975_Epitope_Rep3 961.48689587533 961.48578993586 40.772 2 0.13912238372212968 0.001131001131001131 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 109602 9815 THDEAVQVL True PC9_epitope_Rep2 1010.5032742154598 1010.50216993586 43.089 2 0.13912054549052708 0.001131001131001131 0.9438714419765777 ['ENSG00000101400|ENST00000217381|SNTA1', 'SNTA1|p.G203Afs*15|1|0.32|ENSG00000101400|chr20:33417812-33417812|C/-|frameshift_variant', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 140672 13537 YYPSTPGRYSI True PC9_epitope_Rep4 1302.6244519773 1302.62334993586 59.966 2 0.13911996735840929 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 14846 9609 DYFEEYGK True NCI_RA007_Epitope_Rep2 1049.4341915961297 1049.4330899358602 41.991 2 0.13911666052477972 0.001131001131001131 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 70925 14971 MELITPISA True H1975_Epitope_Rep1 973.5154191222899 973.51432993586 62.829 2 0.13911099625924644 0.001131001131001131 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 30405 8634 GAFGKPSSL True PC9_epitope_Rep2 862.45486747106 862.45376993586 38.576 2 0.13910700819797672 0.001131001131001131 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 138368 7519 YRDGPGNPL True PC9_epitope_Rep4 987.4773938207899 987.47628993586 36.289 2 0.13910322901146008 0.001131001131001131 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 37308 13005 GVVPTIQKV True PC9_epitope_Rep3 939.5753169569098 939.57420993586 55.052 2 0.13910320859346187 0.001131001131001131 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 91497 4995 RNVSTGDVNVE True PC9_epitope_Rep6 1188.5734790335998 1188.5723899358602 26.819 2 0.13910242341193646 0.001131001131001131 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 120892 8461 VGDVYIPR True NCI_RA007_Epitope_Rep1 917.4970666362099 917.49596993586 36.911 2 0.13909859291941173 0.001131001131001131 0.9438714419765777 ['SRSF2|p.S196*|1|0.29|ENSG00000161547|chr17:76736233-76736240|CCTCTTGG/-|frameshift_variant', 'nc|ENSG00000161547|Q01130-2|SRSF2', 'ENSG00000161547|ENST00000359995|SRSF2', 'nc|ENSG00000263465|Q9BRL6-2|SRSF8', 'ENSG00000263465|ENST00000587424|SRSF8'] 49336 9144 KIDENQLMY True H1975_Epitope_Rep2 1152.54851015572 1152.54740993586 40.124 2 0.1390962348370001 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN', 'ERBIN|p.D635Mfs*50|1|0.47|ENSG00000112851|chr5:66048775-66048775|A/-|frameshift_variant', 'ERBIN|p.G1049Afs*21|1|0.18|ENSG00000112851|chr5:66054463-66054463|G/-|frameshift_variant'] 93800 18555 RVADDVFTL True PC9_epitope_Rep2 1034.53965972418 1034.53856993586 76.722 2 0.13908859971352983 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 28094 18556 FREDMPSIL True PC9_epitope_Rep4 1106.5430308524599 1106.54192993586 79.45 2 0.13908434552981414 0.001131001131001131 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 88514 9658 RADDTFEAL True NCI_RA007_Epitope_Rep5 1036.48253877088 1036.4814499358602 43.786 2 0.13908206721866628 0.001131001131001131 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 130431 17199 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 70.975 2 0.13908086787715115 0.001131001131001131 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 41165 20787 HYSPIYLSF True PC9_epitope_Rep5 1125.5494961318898 1125.54838993586 85.009 2 0.13906851589035832 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 72299 4977 MSEEHTAVY True H1975_Epitope_Rep2 1065.44371073401 1065.4426099358602 24.227 2 0.13906816827901702 0.001131001131001131 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 98857 22810 SIVDFLITA True PC9_epitope_Rep4 977.5433481222899 977.54224993586 95.96 2 0.13906010473517072 0.001131001131001131 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 72914 16597 NAYTGIVLL True H1975_Epitope_Rep1 962.54368247546 962.5431349679301 69.218 1 0.13905856595673202 0.001131001131001131 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 2464 6131 AEQPPHLTP True H1975_Epitope_Rep2 988.4977949122 988.49668993586 28.56 2 0.1390567751777222 0.001131001131001131 0.9438714419765777 ['ENSG00000146733|ENST00000275605|PSPH'] 23726 22489 EYINFLENL True PC9_epitope_Rep4 1153.5655401188499 1153.56444993586 94.735 2 0.13903664872570023 0.001131001131001131 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 21150 21180 ERDTYMLLL True PC9_epitope_Rep1 1152.58489566444 1152.58378993586 86.303 2 0.13903572554030152 0.001131001131001131 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2', 'ENST00000560428.1_1_14:103593910-103596305:+|nuORF'] 73283 5658 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.50692993586 26.793 2 0.13902632474668122 0.001131001131001131 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 7832 7062 ATAGFTIGR True NCI_RA007_Epitope_Rep3 892.4766655447999 892.47556993586 34.896 2 0.13902442887996544 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'MED12|p.V456A|1|0.18|ENSG00000184634|chrX:71122756-71122756|T/C|missense_variant'] 109841 12955 THLLNQDTL True PC9_epitope_Rep1 1053.54547338061 1053.54436993586 54.704 2 0.1390231824323918 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 21693 13941 ERYFISHVL True PC9_epitope_Rep6 1162.61349337078 1162.6118549037901 65.473 3 0.13902011049286994 0.001131001131001131 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 135641 7929 YEETSGVSV True H1975_Epitope_Rep2 969.4291062156899 969.42855496793 35.444 1 0.13900739687253086 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 77562 18475 NYSNIRFQF True PC9_epitope_Rep4 1187.57235683479 1187.5712499358601 79.135 2 0.1390065333760936 0.001131001131001131 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 89218 8235 REIQEAIAV True H1975_Epitope_Rep2 1027.5662088251897 1027.5651099358602 36.627 2 0.13900331593900575 0.001131001131001131 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 6352 4949 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 26.606 2 0.13900107829307007 0.001131001131001131 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 73575 18106 NFTNVAATF True PC9_epitope_Rep6 983.4712458111899 983.47014993586 82.28 2 0.13899958918798253 0.001131001131001131 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 95689 10313 SAYDGKDYI True PC9_epitope_Rep4 1030.46074069714 1030.4596499358602 47.356 2 0.13899884493003292 0.001131001131001131 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 70299 20122 LYPEGLAQL True PC9_epitope_Rep4 1002.5385970950199 1002.53750993586 85.534 2 0.138993841743363 0.001131001131001131 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 39797 19232 HQDSTWIVL True PC9_epitope_Rep4 1097.55055876105 1097.54946993586 82.076 2 0.13898958235314396 0.001131001131001131 0.9438714419765777 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 96541 12086 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42760993586 51.571 2 0.13898792568300253 0.001131001131001131 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 113313 16456 TQILSVPKV True PC9_epitope_Rep1 983.6015317047498 983.60042993586 68.123 2 0.13898044102201018 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 136337 13105 YHAQMPDSL True PC9_epitope_Rep1 1060.46478053176 1060.4636899358602 55.275 2 0.13897731655044396 0.001131001131001131 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 92135 3664 RQALQKQAL True NCI_RA007_Epitope_Rep4 1054.6247267608198 1054.6236299358602 20.196 2 0.13897414338861588 0.001131001131001131 0.9438714419765777 ['ENSG00000123689|ENST00000367029|G0S2'] 75343 15529 NQAKYIPEL True PC9_epitope_Rep1 1074.57095985246 1074.5698699358602 64.556 2 0.13897228860721964 0.001131001131001131 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 37215 22077 GVVDIFQTV True PC9_epitope_Rep2 976.52294703088 976.52239496793 90.391 1 0.13897164197040554 0.001131001131001131 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 113158 20049 TQDAVPLTL True PC9_epitope_Rep3 956.51786165044 956.51731496793 82.368 1 0.13896369899914013 0.001131001131001131 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 37307 12256 GVVPTIQKV True PC9_epitope_Rep2 939.5753169569098 939.57420993586 52.453 2 0.13896156586316985 0.001131001131001131 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 11910 20174 DHSFSLEL True PC9_epitope_Rep1 946.4396113297399 946.43850993586 82.428 2 0.1389567536895063 0.001131001131001131 0.9438714419765777 ['ENSG00000128272|ENST00000674920|ATF4'] 40157 5195 HRDYETATL True PC9_epitope_Rep6 1104.51998690876 1104.5188899358602 27.737 2 0.13895374155034332 0.001131001131001131 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 105333 7874 STVNVILGK True NCI_RA007_Epitope_Rep3 929.5545815123298 929.55348993586 38.091 2 0.13894914338267608 0.001131001131001131 0.9438714419765777 ['ADGRF5|p.W968Gfs*8|1|0.1|ENSG00000069122|chr6:46859002-46859002|C/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 97796 14226 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 59.545 2 0.13893853887316557 0.001131001131001131 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 74026 8835 NHSDYNM[Oxidation]VL True PC9_epitope_Rep2 1107.46550918819 1107.4644099358602 39.335 2 0.13893521971676132 0.001131001131001131 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 9162 15401 AVNPHFIAV True PC9_epitope_Rep1 966.5287011176599 966.52760993586 64.059 2 0.13893479921709578 0.001131001131001131 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 56207 18622 LDPHLVLDQLR True PC9_epitope_Rep4 1317.7404847890498 1317.73882490379 79.707 3 0.13892316471612076 0.001131001131001131 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 114034 9178 TRMSTVSEL True PC9_epitope_Rep2 1022.5066453437399 1022.5055499358599 40.642 2 0.13891801812673643 0.001131001131001131 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 45158 19836 IRDNFVIVY True PC9_epitope_Rep1 1137.61824439805 1137.6171499358602 81.115 2 0.1389177566271454 0.001131001131001131 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 86965 17872 QRVEDAFYTL True PC9_epitope_Rep4 1240.6088019131596 1240.6077099358602 76.784 2 0.13891388719037479 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS'] 9831 18223 AYLKGTVLF True PC9_epitope_Rep4 1010.5800679841799 1010.57896993586 78.165 2 0.13891070929852364 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 62132 15617 LLPDNVHYV True PC9_epitope_Rep3 1068.5603951687601 1068.55928993586 65.219 2 0.1389069151724809 0.001131001131001131 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 40838 12330 HVLEEVQQV True PC9_epitope_Rep1 1079.56112344475 1079.56002993586 52.284 2 0.13890484576078202 0.001131001131001131 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 74098 5613 NHVNSGCQL True PC9_epitope_Rep5 970.42906372938 970.42796993586 26.593 2 0.1388931310652036 0.001131001131001131 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 135549 6197 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52897496793 28.809 1 0.1388915440641802 0.001131001131001131 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 83210 12007 QAADLAYQL True NCI_RA007_Epitope_Rep3 991.4974605590301 991.49636993586 54.354 2 0.138886470669381 0.001131001131001131 0.9438714419765777 ['ENSG00000147113|ENST00000398000|DIPK2B', 'DIPK2B|p.D262Y|1|0.55|ENSG00000147113|chrX:45154087-45154087|C/A|missense_variant'] 96728 8379 SEQFTAM[Oxidation]FR True H1975_Epitope_Rep1 1131.5018946969099 1131.5007899358602 37.158 2 0.13888396802827557 0.001131001131001131 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000415481.1_1_1:809210-809726:+|nuORF', 'ENST00000402141.1_1_6:143757385-143757844:+|nuORF', 'ENST00000445286.3_1_12:38597181-38597481:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000261456|ENST00000568584|TUBB8'] 31924 13125 GEQWTPIEP True H1975_Epitope_Rep2 1055.4923751785898 1055.4912699358601 55.607 2 0.1388802453859293 0.001131001131001131 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 128415 10537 VSEDSSVTQIY True H1975_Epitope_Rep2 1226.56666231766 1226.56607496793 45.552 1 0.13887816006423812 0.001131001131001131 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 21298 6973 ERIQHAVQL True PC9_epitope_Rep2 1092.60399131624 1092.60288993586 32.217 2 0.1388755229573577 0.001131001131001131 0.9438714419765777 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 26017 12373 FHDESTQVQL True PC9_epitope_Rep5 1202.5567663402999 1202.5556699358601 52.59 2 0.13886676359415878 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 95465 10917 SALSGHLETV True PC9_epitope_Rep2 1012.5189242796 1012.51782993586 47.315 2 0.138862616867227 0.001131001131001131 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 88280 19078 QYGGDLTNTF True PC9_epitope_Rep3 1114.49310345458 1114.49200993586 78.606 2 0.13884470728794582 0.001131001131001131 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 6341 6440 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 29.745 2 0.1388442708119142 0.001131001131001131 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 2413 15956 AEQLMTLISA True H1975_Epitope_Rep3 1075.55834656343 1075.55724993586 66.829 2 0.13884213139358187 0.001131001131001131 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 108444 12146 TEELAYLK True PC9_epitope_Rep1 965.50696261357 965.50586993586 51.581 2 0.13883133506471507 0.001131001131001131 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 3983 20412 AHFDGLIFV True PC9_epitope_Rep4 1017.5283667644899 1017.52726993586 86.661 2 0.13883005728702408 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 42434 6381 IEQETPVSA True H1975_Epitope_Rep2 972.4763907612798 972.47528993586 29.469 2 0.13882858130861328 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2', 'ENST00000395449.7_1_11:47187835-47198404:-|nuORF'] 133815 20952 WLVDHVYAI True PC9_epitope_Rep3 1114.5811306133398 1114.58002993586 85.87 2 0.13882748863891423 0.001131001131001131 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'ENST00000529672.1_1_11:111613245-111618714:-|nuORF', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 11976 19253 DHTVGFIL True PC9_epitope_Rep4 900.4705175351999 900.4699649679301 82.159 1 0.13882608678970404 0.001131001131001131 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 119251 10356 VELDNM[Oxidation]PLR True PC9_epitope_Rep1 1101.54884488933 1101.54774993586 44.717 2 0.13882094751182214 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 1327 7234 AEEAEILHSA True H1975_Epitope_Rep3 1068.5087535187201 1068.5076499358602 32.797 2 0.13881192784027138 0.001131001131001131 0.9438714419765777 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 32591 10122 GHDASQITL True PC9_epitope_Rep1 940.46140940348 940.46030993586 43.808 2 0.13880222276790719 0.001131001131001131 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 117403 9593 VADGYPVRL True NCI_RA007_Epitope_Rep5 988.5341804209199 988.53308993586 43.542 2 0.13880205520925515 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 64036 9439 LQDFFNGR True H1975_Epitope_Rep1 995.4824792012299 995.48138993586 41.222 2 0.138800877227334 0.001131001131001131 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 90541 8323 RKFLDGNEL True NCI_RA007_Epitope_Rep2 1090.5771078620598 1090.5760099358602 37.015 2 0.1388007629863437 0.001131001131001131 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 94525 20381 RYIDRIHIFF True PC9_epitope_Rep5 1378.7509899031 1378.74934490379 83.431 3 0.13879886709580466 0.001131001131001131 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 69443 6850 LVRPPTEQA True PC9_epitope_Rep5 1009.55564414149 1009.55454993586 31.319 2 0.13879432671086617 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 22222 9694 ETDKNGFLQY True H1975_Epitope_Rep3 1213.5615173675699 1213.5604299358602 42.309 2 0.1387823651040302 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 8981 11962 AVHEDIVAV True PC9_epitope_Rep5 951.5025459394699 951.50144993586 51.008 2 0.13877791683572974 0.001131001131001131 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 104609 8292 SSVATITRL True H1975_Epitope_Rep2 946.54474510462 946.54364993586 36.846 2 0.1387739683708621 0.001131001131001131 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 52594 15190 KPYNVYITV True PC9_epitope_Rep4 1095.59644632431 1095.5953499358602 66.352 2 0.13877395582166663 0.001131001131001131 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 120111 10990 VFIDKQTNL True PC9_epitope_Rep6 1076.5866099166 1076.58550993586 53.164 2 0.1387733684432031 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 78178 6037 PAPPPPPPP True NCI_RA007_Epitope_Rep5 865.46978925921 865.46868993586 29.903 2 0.13876843293041974 0.001131001131001131 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 98063 15015 SHVDLVVM[Oxidation]V True PC9_epitope_Rep4 1013.52156751233 1013.52046993586 65.692 2 0.13876132916967454 0.001131001131001131 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 120705 9674 VGARIYHTI True PC9_epitope_Rep1 1028.5767139392399 1028.57560993586 42.068 2 0.13876002575003957 0.001131001131001131 0.9438714419765777 ['ENSG00000008394|ENST00000396210|MGST1', 'ENST00000539708.5_1_12:16513351-16516972:+|nuORF'] 108702 4933 TEMEHEVAC True H1975_Epitope_Rep2 1047.40013166987 1047.3990299358602 24.057 2 0.13875158586882444 0.001131001131001131 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 74029 14120 NHSDYNMVL True PC9_epitope_Rep1 1091.47059418819 1091.46948993586 59.139 2 0.1387284967059344 0.001131001131001131 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 104227 11140 SSDNIMVQY True H1975_Epitope_Rep1 1055.45936079815 1055.45877496793 47.817 1 0.13872812828273426 0.001131001131001131 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 26257 11914 FIAPTGHSL True PC9_epitope_Rep2 941.4970666362101 941.49596993586 51.152 2 0.13872633686075195 0.001131001131001131 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 113695 9008 TRDETNYGI True PC9_epitope_Rep5 1067.4883524273098 1067.48724993586 39.595 2 0.138725314825427 0.001131001131001131 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 123469 7165 VIFTGGVGK True NCI_RA007_Epitope_Rep5 876.5069030439198 876.50580993586 34.235 2 0.1387226860257622 0.001131001131001131 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 8512 16832 ATVPGLLKV True PC9_epitope_Rep5 896.5695033004799 896.56840993586 69.753 2 0.13872251937960553 0.001131001131001131 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 39762 8741 HPYPPGPGV True PC9_epitope_Rep3 919.4552018242299 919.45410993586 38.576 2 0.13871673369905693 0.001131001131001131 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 136672 9791 YIDSKFEDY True H1975_Epitope_Rep3 1178.5131701928199 1178.5120699358602 42.685 2 0.13871631684880206 0.001131001131001131 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF', 'ENST00000428867.1_1_7:45797631-45798728:-|nuORF', 'ENST00000429741.5_1_7:45796578-45798731:-|nuORF', 'ENST00000449219.2_1_1:224190265-224197055:+|nuORF', 'ENST00000489259.5_1_10:38674311-38691690:-|nuORF'] 11642 10180 DHASIQMNV True PC9_epitope_Rep6 1013.46002950449 1013.4589299358599 49.791 2 0.138713420726917 0.001131001131001131 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 72147 19693 M[Oxidation]RFLAATFL True PC9_epitope_Rep4 1084.57393743836 1084.57282993586 83.87 2 0.13871043900990093 0.001131001131001131 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 113340 8655 TQKSLSLSLG True NCI_RA007_Epitope_Rep3 1032.5815245361598 1032.5804299358601 41.125 2 0.1387025870987079 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4'] 135238 12192 YAYDGKDYLA True PC9_epitope_Rep4 1177.5291546101298 1177.52804993586 54.715 2 0.1386997632587326 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 39490 8512 HPADSVVSV True PC9_epitope_Rep5 909.4555957470501 909.45448993586 37.683 2 0.13869251948043196 0.001131001131001131 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 77445 8625 NYNNQSSNF True PC9_epitope_Rep5 1086.4366512076201 1086.43554993586 38.119 2 0.13868938414101356 0.001131001131001131 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 23350 13617 EVTINQSLL True H1975_Epitope_Rep3 1015.55497543515 1015.55386993586 57.665 2 0.1386807866992858 0.001131001131001131 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6B|p.V140I|1|0.08|ENSG00000185479|chr12:52451661-52451661|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'CON__P50446', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 38932 19850 HIPDVITYL True PC9_epitope_Rep4 1069.58079626017 1069.5796899358602 84.484 2 0.1386727812875029 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 110197 15876 TIDQLYLEY True H1975_Epitope_Rep3 1156.5652057656798 1156.56467496793 66.516 1 0.13867223371032653 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 95364 19772 [Acetylation]-SAHLQWMVVR True PC9_epitope_Rep3 1267.64956192597 1267.64846993586 81.281 2 0.13866780571634696 0.001131001131001131 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 126992 13266 VPWMPPGKSSA True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 55.892 2 0.13866636730431425 0.001131001131001131 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 9925 20165 AYPPAPFMHI True PC9_epitope_Rep1 1142.55828699378 1142.5571899358602 82.394 2 0.13866571384183252 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 123104 12281 VHAQIVSTL True PC9_epitope_Rep5 966.5498304850599 966.54872993586 52.227 2 0.13866517948507628 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 138253 11139 YQVAAAESHPL True PC9_epitope_Rep3 1184.5825871653199 1184.5814899358602 47.845 2 0.13866367388990358 0.001131001131001131 0.9438714419765777 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 113210 20640 TQDSSILPL True PC9_epitope_Rep1 972.5127762699999 972.51222496793 84.213 1 0.1386584945685751 0.001131001131001131 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 8525 4438 ATVTPSPVK True NCI_RA007_Epitope_Rep2 898.5123823471799 898.51128993586 21.896 2 0.13865360701321092 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000069275|Q9H1E3-2|NUCKS1', 'ENSG00000069275|ENST00000367142|NUCKS1'] 107406 13386 SYTRLFSNF True NCI_RA007_Epitope_Rep5 1133.5505587610498 1133.54946993586 58.176 2 0.13864933160665302 0.001131001131001131 0.9438714419765777 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 15149 12513 EAEPHPLWEY True H1975_Epitope_Rep2 1269.56660274801 1269.56550993586 53.225 2 0.1386468625038219 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 95176 17111 SAAFPGASL True PC9_epitope_Rep4 819.41266830591 819.41156993586 73.821 2 0.13864627528076073 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 39389 17324 HLVPEVPTV True PC9_epitope_Rep3 989.55458151233 989.55348993586 71.81 2 0.1386461707622166 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 49333 7258 KIDEHHFVAV True PC9_epitope_Rep6 1193.6193070272102 1193.61766490379 37.044 3 0.1386439145627437 0.001131001131001131 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 36 17028 AAAAVIPTV True PC9_epitope_Rep2 811.48035394291 811.47924993586 70.749 2 0.13863866460056254 0.001131001131001131 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 135372 15146 YDGIILPGK True PC9_epitope_Rep1 974.54368247546 974.54258993586 63.081 2 0.13863412551786633 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000142676|P62913-2|RPL11', 'ENSG00000142676|ENST00000643754|RPL11', 'ENST00000482370.1_1_1:24019089-24022860:+|nuORF'] 124650 21238 VLIGEFLEKV True PC9_epitope_Rep2 1145.66961126457 1145.6685099358601 87.15 2 0.13860375142430198 0.001131001131001131 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 43528 12558 IIDLVLDR True NCI_RA007_Epitope_Rep2 955.57023157647 955.56912993586 53.463 2 0.13860171782059424 0.001131001131001131 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 132805 13590 VYSRTFTWL True NCI_RA007_Epitope_Rep3 1171.6025943339098 1171.6014899358602 60.753 2 0.13858961142504667 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 35267 4449 GSMGSFSEK True NCI_RA007_Epitope_Rep3 928.3960322656001 928.39492993586 24.304 2 0.13858851946985468 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 33674 20856 GLPRFGIEMV True PC9_epitope_Rep3 1117.5954007784899 1117.59430993586 85.496 2 0.13858178918965897 0.001131001131001131 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106'] 120295 10201 VFPEKGYSF True NCI_RA007_Epitope_Rep3 1072.5229470308798 1072.52184993586 47.209 2 0.13858168789499048 0.001131001131001131 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 35 17301 AAAAVIPTV True PC9_epitope_Rep1 811.48035394291 811.47924993586 71.364 2 0.13857938775003822 0.001131001131001131 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 109662 11385 THDTFQNEL True PC9_epitope_Rep3 1103.48835242731 1103.48724993586 48.795 2 0.13857726963073605 0.001131001131001131 0.9438714419765777 ['ENSG00000198642|ENST00000359039|KLHL9'] 89508 10396 REQSWMTMA True H1975_Epitope_Rep2 1138.48994973378 1138.4888499358601 45.0 2 0.1385767959930652 0.001131001131001131 0.9438714419765777 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 17695 18479 EHSLPTLGL True PC9_epitope_Rep3 965.51819600361 965.5176449679301 76.287 1 0.13857465464547214 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 132944 22336 VYTVVDEMFL True PC9_epitope_Rep4 1214.5893123385397 1214.58877496793 94.153 1 0.13857450533232696 0.001131001131001131 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 12598 12639 DLDSRVLYY True H1975_Epitope_Rep3 1142.5607890915799 1142.56027496793 53.821 1 0.13856450896513106 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 86271 10183 QQDKQQLVL True PC9_epitope_Rep5 1098.6033226099 1098.6022299358601 44.156 2 0.13856007706914084 0.001131001131001131 0.9438714419765777 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant'] 29772 17057 FVSISDLLVPK True NCI_RA007_Epitope_Rep2 1216.7067250492798 1216.70562993586 71.085 2 0.13854731479545174 0.001131001131001131 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 25986 21090 FGYVDFESA True PC9_epitope_Rep1 1033.4392769765698 1033.43877496793 85.952 1 0.13854075246576775 0.001131001131001131 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 100489 12918 SLPKGVVEV True PC9_epitope_Rep5 926.54368247546 926.54258993586 54.7 2 0.13853862538380846 0.001131001131001131 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 48711 4637 KEMPTVAQA True NCI_RA007_Epitope_Rep5 973.4902670036098 973.48916993586 24.514 2 0.138533953481844 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 132201 7949 VYKDHQTITI True PC9_epitope_Rep2 1216.6451874218799 1216.6435349037902 35.94 3 0.13853324107807455 0.001131001131001131 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 3499 14317 AGLQFPVGR True PC9_epitope_Rep2 943.5239500903898 943.52284993586 60.335 2 0.13853220407898095 0.001131001131001131 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 23659 21649 EYGPIHILW True PC9_epitope_Rep1 1126.5811306133398 1126.58002993586 88.101 2 0.13853111609184068 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7', 'ENSG00000162627|ENST00000306121|SNX7'] 21113 14576 ERDPSPWAV True PC9_epitope_Rep3 1055.50360856863 1055.5025099358602 61.193 2 0.13853065099983053 0.001131001131001131 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 52307 12256 KPANVFITA True PC9_epitope_Rep1 959.54401682863 959.54346496793 52.003 1 0.13852724249142132 0.001131001131001131 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 30199 19957 FYVPAEPKLAF True PC9_epitope_Rep4 1280.68051030144 1280.6794099358601 84.899 2 0.13852714360166662 0.001131001131001131 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 108569 9378 TEHFLTAVA True H1975_Epitope_Rep3 987.5025459394699 987.50144993586 41.072 2 0.1385209717765797 0.001131001131001131 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L'] 102208 7801 SPSPPFGHSA True PC9_epitope_Rep1 982.4508447197801 982.44974993586 34.83 2 0.13851485916297518 0.001131001131001131 0.9438714419765777 ['ENSG00000141232|ENST00000499247|TOB1'] 91141 15929 RLPDIPLRQV True PC9_epitope_Rep5 1205.72444080209 1205.72278490379 66.263 3 0.13851355831556098 0.001131001131001131 0.9438714419765777 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF'] 138356 6070 YRDEFSHQV True PC9_epitope_Rep4 1179.53088594563 1179.52924490379 30.348 3 0.13850974912833136 0.001131001131001131 0.9438714419765777 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.H813Ifs*24|1|0.36|ENSG00000109111|chr17:28684908-28684908|C/-|frameshift_variant'] 89835 22118 RFLAATFLL True PC9_epitope_Rep5 1050.6226015025 1050.62150993586 90.111 2 0.13850164535927673 0.001131001131001131 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 77607 17653 NYTLVSHLI True PC9_epitope_Rep6 1058.5760452329 1058.57494993586 80.541 2 0.13849612753195106 0.001131001131001131 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 13176 11343 DLTDYLM[Oxidation]K True H1975_Epitope_Rep1 1013.47394861357 1013.47284993586 48.607 2 0.13849215491957462 0.001131001131001131 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 26636 20751 FLADPSAFVAA True PC9_epitope_Rep4 1107.5600608155898 1107.5589699358602 87.974 2 0.13848881810796498 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 55048 22488 LALFPGVAL True PC9_epitope_Rep4 899.5480395799099 899.54694993586 94.731 2 0.1384873999475169 0.001131001131001131 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 131056 21479 VVLPLELKL True PC9_epitope_Rep3 1022.6739683690199 1022.6728699358599 87.91 2 0.13848358810558814 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 29711 19112 FVPEIFHRI True PC9_epitope_Rep3 1156.6393141958 1156.63765490379 78.738 3 0.1384756182775195 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 138966 11591 YSESSQLLY True H1975_Epitope_Rep1 1088.50260550912 1088.5015099358602 49.573 2 0.13847367982947428 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 48913 9638 KEVFLAQPV True NCI_RA007_Epitope_Rep5 1029.5858816406096 1029.58478993586 43.713 2 0.13846291844047207 0.001131001131001131 0.9438714419765777 ['ENST00000376007.8_1_6:31588511-31590634:+|nuORF'] 129186 15286 VTDGAFFDY True H1975_Epitope_Rep2 1033.43927697657 1033.43877496793 63.957 1 0.13846117967545327 0.001131001131001131 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4', 'FBXO4|p.M140L|1|0.13|ENSG00000151876|chr5:41927241-41927241|A/C|missense_variant'] 139968 19466 YVISEGFLKA True PC9_epitope_Rep5 1125.60701100801 1125.6059099358602 79.929 2 0.13845618153922548 0.001131001131001131 0.9438714419765777 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 20895 14823 EQSRIITVL True PC9_epitope_Rep4 1057.6131590176099 1057.61206993586 64.955 2 0.13844919847040543 0.001131001131001131 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 65440 10895 LSEWQKELY True H1975_Epitope_Rep1 1194.5920892198599 1194.59098993586 46.869 2 0.13844629680468581 0.001131001131001131 0.9438714419765777 ['ENSG00000196453|ENST00000247930|ZNF777'] 136767 17846 YIPTELDQV True PC9_epitope_Rep6 1076.53899101784 1076.5378899358602 81.274 2 0.13844448854308622 0.001131001131001131 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 139191 7242 YSTEPNNL True H1975_Epitope_Rep3 936.41887588516 936.4183249679301 32.828 1 0.1384442081565379 0.001131001131001131 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 113590 8007 TRAGPGTLSV True PC9_epitope_Rep2 957.52434401321 957.52324993586 36.161 2 0.13844093038751973 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 109964 18463 THSLPVVVI True PC9_epitope_Rep1 963.5753169569099 963.57420993586 75.809 2 0.13844077791824752 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 61262 15020 LLDSDEPLVY True H1975_Epitope_Rep3 1162.57577044938 1162.57517496793 63.165 1 0.13844040810981234 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 70576 17064 LYYDAIWHF True NCI_RA007_Epitope_Rep3 1226.5760452328998 1226.57494993586 74.986 2 0.13843853288556818 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 62777 15327 LMDHTIPEV True PC9_epitope_Rep2 1053.51648175145 1053.5153899358602 64.236 2 0.13843597891544043 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 85160 9829 QIYGVFDEK True NCI_RA007_Epitope_Rep4 1097.53932537101 1097.53822993586 44.656 2 0.1384339801296477 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12', 'nc|ENSG00000150712|Q9C0I1-3|MTMR12', 'MTMR12|p.A373Sfs*99|1|0.31|ENSG00000150712|chr5:32242111-32242112|-/T|frameshift_variant'] 23668 20647 EYGPVYSTW True PC9_epitope_Rep5 1100.48147614172 1100.4803699358602 84.473 2 0.13842564734572252 0.001131001131001131 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30'] 115001 9377 TTLDEKIEKV True PC9_epitope_Rep1 1174.64451871554 1174.64287490379 40.926 3 0.1384187960077589 0.001131001131001131 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 21129 20913 ERDRLILFL True PC9_epitope_Rep1 1173.6869926642098 1173.6853349037901 85.262 3 0.13841480556239152 0.001131001131001131 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 27655 18041 FQDDNNLYL True PC9_epitope_Rep6 1140.50875351872 1140.5076499358602 82.027 2 0.13841140871999236 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 135689 12347 YEIDKTLGI True H1975_Epitope_Rep1 1050.55972646242 1050.5586299358602 52.523 2 0.13840817354058876 0.001131001131001131 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 68706 13531 LVDDPLEY True H1975_Epitope_Rep3 962.4596780679799 962.45912496793 57.326 1 0.1384051999699997 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 139635 15100 YTSDYFISY True H1975_Epitope_Rep1 1157.49170647225 1157.49117496793 63.336 1 0.1384022051994912 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 38720 19471 HHSSVIFIF True PC9_epitope_Rep2 1085.56581490237 1085.56470993586 80.275 2 0.13839460054588443 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 60154 20008 LHYGLPVVV True PC9_epitope_Rep5 995.5804023373499 995.57930993586 82.015 2 0.13839429603045902 0.001131001131001131 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 38760 15003 HHYEGAVVIL True PC9_epitope_Rep1 1136.5978433066398 1136.59674993586 62.529 2 0.13839416429855336 0.001131001131001131 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 127442 18976 VQSGLRILL True PC9_epitope_Rep2 997.6284151589299 997.62730993586 78.357 2 0.13839269424595607 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 56066 17172 LDLDSIIAEVK True H1975_Epitope_Rep1 1214.67581884382 1214.6747299358601 71.502 2 0.13838353464376854 0.001131001131001131 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q922U2'] 29278 13129 FVDKNNDLL True PC9_epitope_Rep5 1076.55022440788 1076.54912993586 55.505 2 0.13837861120532033 0.001131001131001131 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 27969 19580 FQSSAVMAL True PC9_epitope_Rep2 952.4688032830398 952.46770993586 80.696 2 0.13837226675785005 0.001131001131001131 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 31835 16428 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53329496793 68.412 1 0.13837007480429606 0.001131001131001131 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 132738 21521 VYSIVPQSW True PC9_epitope_Rep5 1077.54949613189 1077.54897496793 87.816 1 0.13836938238944813 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 15944 8234 EDTEEYNLR True PC9_epitope_Rep1 1167.5043964142699 1167.50328993586 36.505 2 0.13836683517898055 0.001131001131001131 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 26074 6899 FHDSAVTSV True PC9_epitope_Rep6 961.45051036661 961.44940993586 35.456 2 0.13836035157606316 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 47606 12781 IYNQVKQII True PC9_epitope_Rep6 1117.64954452633 1117.64844993586 60.656 2 0.13835512825298224 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 2021 8140 AELATRALP True NCI_RA007_Epitope_Rep2 940.5341804209199 940.53308993586 36.297 2 0.1383544470906301 0.001131001131001131 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 89133 11607 REFSDFIQA True NCI_RA007_Epitope_Rep4 1111.52982331647 1111.5287299358602 51.599 2 0.13835373567748058 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1', 'nc|ENSG00000139697|A3KN83-4|SBNO1'] 103054 19286 SQLDVPFKV True PC9_epitope_Rep5 1031.56514619603 1031.56404993586 79.227 2 0.1383518901985233 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 134940 11399 YAEVGRVL True PC9_epitope_Rep2 905.4970666362099 905.49596993586 49.168 2 0.1383489296403199 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 105610 10431 SVELPIVGK True NCI_RA007_Epitope_Rep5 940.5593325395998 940.55822993586 46.752 2 0.13834580715354985 0.001131001131001131 0.9438714419765777 ['ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 119095 11088 VEIAYSDVA True H1975_Epitope_Rep2 965.4705771048499 965.46948993586 47.684 2 0.13833043011517818 0.001131001131001131 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 109819 20165 THLEGVLLL True PC9_epitope_Rep2 993.5858816406098 993.58478993586 82.977 2 0.13831782796292333 0.001131001131001131 0.9438714419765777 ['ENSG00000204839|ENST00000398882|MROH6', 'MROH6|p.H353Lfs*180|1|0.11|ENSG00000204839|chr8:143570026-143570051|GAGGCCTCGCAGGTGGTGGTCGGCAT/-|frameshift_variant'] 103327 17893 SQVDRLVALA True PC9_epitope_Rep1 1070.6084079903399 1070.60730993586 73.618 2 0.13831667236800924 0.001131001131001131 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 40268 8015 HRNEVTVEL True PC9_epitope_Rep2 1095.56727145435 1095.5661699358602 36.191 2 0.13830865715008223 0.001131001131001131 0.9438714419765777 ['KPNA3|p.N437Kfs*8|1|0.2|ENSG00000102753|chr13:49705682-49705683|-/T|frameshift_variant', 'ENSG00000102753|ENST00000261667|KPNA3'] 6290 6660 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 30.422 2 0.1383057327844787 0.001131001131001131 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 105700 15961 SVHGDFLNV True PC9_epitope_Rep3 986.48214484806 986.48104993586 66.54 2 0.1383031170896151 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 96281 7030 SEESPQVVEA True H1975_Epitope_Rep3 1073.48768372097 1073.4865899358601 32.004 2 0.13829918805109617 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 48163 11993 KASDLYITL True NCI_RA007_Epitope_Rep3 1022.56481184286 1022.56370993586 54.301 2 0.13829694754468602 0.001131001131001131 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2'] 4860 22249 ALFVRLLALA True PC9_epitope_Rep2 1085.6961007959299 1085.69500993586 91.058 2 0.1382917558118607 0.001131001131001131 0.9438714419765777 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000504185.5_1_5:135364744-135380547:+|nuORF'] 32273 15073 GFQNALIVR True PC9_epitope_Rep5 1016.5767139392399 1016.57560993586 62.986 2 0.13828766231468986 0.001131001131001131 0.9438714419765777 ['CON__P02769'] 100426 9432 SLPDFPAAAK True NCI_RA007_Epitope_Rep5 1015.5338460677499 1015.53274993586 42.917 2 0.13828495754449616 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'ENST00000539881.5_1_16:57068826-57081664:+|nuORF', 'ENST00000538930.5_1_16:57075247-57096263:+|nuORF'] 130817 19826 VVFEIQGTTV True PC9_epitope_Rep4 1091.58627556343 1091.5851699358602 84.389 2 0.13828382502072117 0.001131001131001131 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 36449 13098 GVIPYFPYSK True NCI_RA007_Epitope_Rep3 1169.6120963884498 1169.61098993586 58.802 2 0.13828037004560703 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000161542|Q14558|PRPSAP1', 'ENSG00000161542|ENST00000446526|PRPSAP1', 'nc|ENSG00000141127|O60256-4|PRPSAP2', 'nc|ENSG00000141127|O60256-3|PRPSAP2', 'nc|ENSG00000141127|O60256-2|PRPSAP2', 'ENSG00000141127|ENST00000268835|PRPSAP2'] 32039 8645 GEVLDPTAA True H1975_Epitope_Rep2 871.4287122928699 871.42816496793 38.211 1 0.13827373552368463 0.001131001131001131 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1', 'RUSF1|p.Q301H|1|0.38|ENSG00000140688|chr16:31493658-31493658|C/G|missense_variant', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 1858 6416 AEIEPEAQA True H1975_Epitope_Rep3 956.445090633 956.44454496793 29.655 1 0.1382686317754949 0.001131001131001131 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 76073 13683 NRLTFASTL True PC9_epitope_Rep6 1021.55564414149 1021.55454993586 64.416 2 0.13825656677071596 0.001131001131001131 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 128373 13529 VSDPVGVLY True H1975_Epitope_Rep3 947.49639792987 947.4958449679301 57.319 1 0.13824326072667198 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 59749 11837 LGVTVLSR True PC9_epitope_Rep1 843.5178020807899 843.51670993586 50.396 2 0.13824173139567267 0.001131001131001131 0.9438714419765777 ['ENSG00000159231|ENST00000290354|CBR3'] 25582 7112 FESSGIHVA True H1975_Epitope_Rep2 945.45559574705 945.45448993586 32.288 2 0.13824018412316402 0.001131001131001131 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 95059 12308 RYSEYAEEF True PC9_epitope_Rep4 1192.5036681382796 1192.50256993586 55.155 2 0.13823577628082606 0.001131001131001131 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 103545 15176 SRDDNMFQI True PC9_epitope_Rep6 1124.49205790876 1124.4909699358602 70.451 2 0.1382355487885001 0.001131001131001131 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 35777 5313 GTVIHFNNPK True NCI_RA007_Epitope_Rep5 1125.59309227937 1125.59143490379 27.13 3 0.1382343981892737 0.001131001131001131 0.9438714419765777 ['RGNEF-BTF3|1|fusion', 'nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 91883 10167 RPNSLVGITSA True PC9_epitope_Rep6 1113.61422164677 1113.6131299358601 49.738 2 0.1382314950439017 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 52767 8683 KQNVVPTVL True NCI_RA007_Epitope_Rep3 996.5967806774798 996.59568993586 41.235 2 0.13822362216040424 0.001131001131001131 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2'] 52299 11261 KPANLLISA True PC9_epitope_Rep4 925.55966689277 925.55856993586 51.09 2 0.13822264577907623 0.001131001131001131 0.9438714419765777 ['ENST00000459720.5_1_9:90585689-90589466:-|nuORF', 'nc|ENSG00000156345|Q8IZL9-2|CDK20', 'nc|ENSG00000156345|Q8IZL9-3|CDK20', 'nc|ENSG00000156345|Q8IZL9-5|CDK20', 'nc|ENSG00000156345|Q8IZL9-4|CDK20', 'ENSG00000156345|ENST00000325303|CDK20'] 88312 9020 QYLEQSSKL True PC9_epitope_Rep2 1094.56078909158 1094.5596899358602 40.045 2 0.1382150032186391 0.001131001131001131 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 116055 5200 TVRSSTSSI True PC9_epitope_Rep2 936.48762415132 936.48652993586 25.388 2 0.13821461924200043 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 16379 10766 EELFIVSK True NCI_RA007_Epitope_Rep2 963.5276980581499 963.52660993586 46.478 2 0.13821295833548783 0.001131001131001131 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 61410 15394 LLEPVLLLGK True H1975_Epitope_Rep1 1093.7110821537299 1093.7099899358602 64.482 2 0.13820474694662763 0.001131001131001131 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 64189 19232 LQIAGLEHL True PC9_epitope_Rep2 992.5654805492 992.56438993586 79.35 2 0.13819593394380167 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 22093 20317 ESVAILPQL True PC9_epitope_Rep2 968.55424715916 968.55314993586 83.574 2 0.13819101753522572 0.001131001131001131 0.9438714419765777 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 105105 9708 STLPAITLK True NCI_RA007_Epitope_Rep3 942.5749826037401 942.57388993586 45.26 2 0.13818876076279088 0.001131001131001131 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 140812 13568 YYSPSCREF True PC9_epitope_Rep5 1150.4753452154598 1150.4742499358601 57.213 2 0.13818607580192133 0.001131001131001131 0.9438714419765777 ['ENSG00000100564|ENST00000216452|PIGH'] 72400 14059 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54177496793 59.231 1 0.13818340620138478 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 107653 12452 TAIHNFPTV True PC9_epitope_Rep4 998.5185303567799 998.51742993586 55.704 2 0.1381812463589267 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 129255 10231 VTDPSTLEQY True H1975_Epitope_Rep1 1151.53463391339 1151.5340749679299 44.297 1 0.13818068719617022 0.001131001131001131 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 125051 16856 VLPGHFNTF True PC9_epitope_Rep3 1030.5236157372199 1030.5225099358602 69.99 2 0.13817874888764772 0.001131001131001131 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 53812 15112 KYFLWVVKF True NCI_RA007_Epitope_Rep3 1228.7008518231999 1228.69921490379 66.942 3 0.13817616080920522 0.001131001131001131 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 60115 10887 LHVDPENFR True PC9_epitope_Rep5 1125.55670677065 1125.5550749037902 46.864 3 0.13817333402383575 0.001131001131001131 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'CON__Q3SX09'] 63317 22121 LPDIFEAQIA True PC9_epitope_Rep2 1115.58627556343 1115.5851699358602 90.564 2 0.13817302204507395 0.001131001131001131 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 113086 19556 TPYNYPVPV True PC9_epitope_Rep1 1048.5229470308798 1048.52184993586 80.047 2 0.13816994436159194 0.001131001131001131 0.9438714419765777 ['ENSG00000170906|ENST00000485876|NDUFA3'] 17586 19874 EHLQLISL True PC9_epitope_Rep5 951.5389314481899 951.53782993586 81.497 2 0.1381678920361303 0.001131001131001131 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 65360 12420 LSEPEEAAALY True H1975_Epitope_Rep3 1191.5659340416698 1191.5648299358602 52.963 2 0.13816228214270923 0.001131001131001131 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant'] 140720 16109 YYQGGKFQF True PC9_epitope_Rep5 1136.52909504048 1136.5279899358602 66.953 2 0.1381615095191587 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 37545 19197 GYMEGYYTF True PC9_epitope_Rep6 1129.44264810485 1129.4415499358602 86.494 2 0.1381575874662133 0.001131001131001131 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 140349 8169 YYEHVKARF True PC9_epitope_Rep3 1211.60874234351 1211.60710490379 36.4 3 0.13815295023591836 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 76269 11437 NSDNNTIFV True H1975_Epitope_Rep3 1022.46688870674 1022.46578993586 49.111 2 0.1381509267941358 0.001131001131001131 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 15107 11425 EADVAQLEY True H1975_Epitope_Rep2 1036.47130538084 1036.4707749679299 48.998 1 0.13814730373185724 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 25888 10806 FGIDRPAEL True H1975_Epitope_Rep3 1016.5290950404799 1016.52798993586 46.645 2 0.13814463210996086 0.001131001131001131 0.9438714419765777 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 40172 12065 HRFLAEDAL True PC9_epitope_Rep4 1070.55089311422 1070.5497899358602 54.215 2 0.13814371694748548 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 74144 12177 NHYNMQYAL True PC9_epitope_Rep6 1152.50222866964 1152.50112993586 58.197 2 0.1381403005539166 0.001131001131001131 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2'] 27634 20480 FQAEIAQLM True PC9_epitope_Rep4 1049.52156713189 1049.52097496793 86.923 1 0.13813996055159267 0.001131001131001131 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 85062 19769 QILPTLVRL True PC9_epitope_Rep4 1051.67536535135 1051.6742699358601 84.166 2 0.13812151619069335 0.001131001131001131 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 113116 12285 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.47578496793 52.107 1 0.13811831250345138 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 72690 15160 MYKLSSEQF True PC9_epitope_Rep5 1131.52704643515 1131.5259499358601 63.32 2 0.13811786972946474 0.001131001131001131 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 116250 13179 TVVAQLKQL True PC9_epitope_Rep4 998.6124307416198 998.61132993586 58.591 2 0.13811590180648467 0.001131001131001131 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 5208 17205 ALPSKLPTF True PC9_epitope_Rep4 972.56441792004 972.56332993586 74.184 2 0.1381136446052094 0.001131001131001131 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 99911 22110 SLIADLEQL True PC9_epitope_Rep4 1000.5440763982799 1000.54296993586 93.263 2 0.1381116275771717 0.001131001131001131 0.9438714419765777 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 103190 12028 SQPPVQVSV True PC9_epitope_Rep6 939.5025459394699 939.50144993586 57.561 2 0.1381081010671243 0.001131001131001131 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 113539 11791 TQVEASEESAL True PC9_epitope_Rep5 1162.5353621893798 1162.53426993586 50.351 2 0.1381073037856764 0.001131001131001131 0.9438714419765777 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 123072 16413 VHAELADVL True PC9_epitope_Rep2 965.5181960036099 965.51708993586 68.376 2 0.13810466993642984 0.001131001131001131 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 94522 19639 RYIDRIHIFF True PC9_epitope_Rep2 1378.7509899031 1378.74934490379 80.926 3 0.13810164441211895 0.001131001131001131 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 1095 7668 AEAPPAYTP True H1975_Epitope_Rep3 915.4337976733101 915.43270993586 34.476 2 0.13809888737860054 0.001131001131001131 0.9438714419765777 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 1821 11898 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 50.766 1 0.13809410606216813 0.001131001131001131 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 101916 10583 SPLLLQAKA True PC9_epitope_Rep6 939.5753169569099 939.57420993586 51.522 2 0.13809187472632684 0.001131001131001131 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 29602 21833 FVLDKVPFL True PC9_epitope_Rep2 1076.6270181766 1076.62592993586 89.456 2 0.1380648948960158 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 108705 3423 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 17.953 2 0.13806474841617478 0.001131001131001131 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 1243 4479 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 22.341 2 0.13806360553459518 0.001131001131001131 0.9438714419765777 ['ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7', 'nc|ENSG00000243414|Q86XR7-2|TICAM2'] 132102 21753 VYILQPEVI True PC9_epitope_Rep5 1072.6168474157198 1072.61627496793 88.701 1 0.1380554696210355 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 40826 20093 HVLDTLIQL True PC9_epitope_Rep4 1050.60734536118 1050.6062499358602 85.42 2 0.13805415799728837 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 104899 8358 STFNQVVLK True NCI_RA007_Epitope_Rep5 1034.5760452328998 1034.57494993586 38.82 2 0.13805009166800314 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 107108 20297 SYMGHFDLL True PC9_epitope_Rep2 1081.49026700361 1081.48967496793 83.494 1 0.13804876736324606 0.001131001131001131 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 2802 4969 AEVEHVVNA True H1975_Epitope_Rep3 966.4770594676199 966.47596993586 24.241 2 0.1380474350231927 0.001131001131001131 0.9438714419765777 ['ENST00000577286.5_1_17:79993838-79994415:-|nuORF', 'ENST00000579842.5_1_17:79993838-79994531:-|nuORF', 'ENSG00000169738|ENST00000306869|DCXR'] 89033 7518 REEEVTGPVIA True H1975_Epitope_Rep1 1198.61936659686 1198.61826993586 33.915 2 0.1380471126389882 0.001131001131001131 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 86510 8372 QRAITGASL True PC9_epitope_Rep3 915.5137793295099 915.51268993586 37.171 2 0.1380425783234562 0.001131001131001131 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24', 'ENST00000446071.1_1_9:72832122-72832404:+|nuORF'] 116671 23520 TYIQILESF True PC9_epitope_Rep1 1112.57537652656 1112.57426993586 95.256 2 0.13804005076701029 0.001131001131001131 0.9438714419765777 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM'] 12138 8162 DIIPNPQER True H1975_Epitope_Rep3 1080.5563724174801 1080.55526993586 36.374 2 0.1380374266720758 0.001131001131001131 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 71997 13348 MQDKSSYLL True PC9_epitope_Rep3 1083.52704643515 1083.5259499358601 56.376 2 0.1380346695566505 0.001131001131001131 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 59890 5724 LHHDDPEVL True PC9_epitope_Rep6 1073.51417325233 1073.5130699358601 30.169 2 0.13803366490869862 0.001131001131001131 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 105253 6848 STSQTFIYK True NCI_RA007_Epitope_Rep4 1073.5393253710097 1073.53822993586 32.962 2 0.1380334161783112 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 103922 9189 SRNSNTVVF True PC9_epitope_Rep5 1022.5145076055 1022.5134099358601 40.29 2 0.13802819000550515 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4', 'CHD8-TOX4|1|fusion'] 22980 16368 EVIKELAQI True PC9_epitope_Rep4 1041.6070110080097 1041.6059099358602 70.922 2 0.13802749024056607 0.001131001131001131 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 48580 12175 KEIDVISIP True H1975_Epitope_Rep1 1012.580461907 1012.57936993586 51.85 2 0.13801803472875557 0.001131001131001131 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 138033 5132 YQDPHSTAV True PC9_epitope_Rep1 1016.45632402304 1016.45522993586 24.592 2 0.1380122257293368 0.001131001131001131 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 53890 15569 KYIEGVSDF True PC9_epitope_Rep3 1056.51277627 1056.51166993586 65.036 2 0.13800921591325477 0.001131001131001131 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 19695 4760 ELSEQIQR True NCI_RA007_Epitope_Rep5 1001.51417325233 1001.51306993586 24.993 2 0.13800608005301038 0.001131001131001131 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 136911 13937 YKDGTELEL True PC9_epitope_Rep3 1066.51825557326 1066.51767496793 58.686 1 0.1380039547711318 0.001131001131001131 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 132317 18843 VYLPNINKI True PC9_epitope_Rep1 1072.62808080576 1072.6269899358601 77.265 2 0.13799937107178434 0.001131001131001131 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 23834 19237 EYLLKVNEI True PC9_epitope_Rep5 1119.61757569171 1119.61646993586 79.034 2 0.13799702446647497 0.001131001131001131 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 4001 15471 AHFSVSDAL True PC9_epitope_Rep1 945.45559574705 945.45448993586 64.331 2 0.13799626407045443 0.001131001131001131 0.9438714419765777 ['ENSG00000101191|ENST00000395343|DIDO1'] 56871 11922 LEDLPTVEA True H1975_Epitope_Rep1 985.49679185269 985.49624496793 50.859 1 0.1379950505757437 0.001131001131001131 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 57954 8236 LEQPTDPVA True H1975_Epitope_Rep2 968.4814761417199 968.48092496793 36.63 1 0.13798818175725241 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 17513 7797 EHINEGETAM[Oxidation]L True PC9_epitope_Rep6 1258.5499670881397 1258.54886993586 39.378 2 0.137984930509781 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 6102 11269 APM[Oxidation]PPIIHA True PC9_epitope_Rep5 961.50552352537 961.50442993586 48.338 2 0.13797861971718903 0.001131001131001131 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 91821 8481 RPNDIM[Oxidation]AEV True PC9_epitope_Rep5 1059.50189469691 1059.5007899358602 37.563 2 0.1379774118446603 0.001131001131001131 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 113321 14253 TQILSVPKV True PC9_epitope_Rep6 983.6015317047498 983.60042993586 66.715 2 0.1379770881284618 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 6309 6181 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 29.165 2 0.1379705697585648 0.001131001131001131 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 3884 8492 AHDDGRWSL True PC9_epitope_Rep4 1055.47845644995 1055.47734993586 40.137 2 0.13796729550358555 0.001131001131001131 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 8838 15383 AVFPSIVGR True PC9_epitope_Rep4 944.5443511817999 944.54324993586 67.102 2 0.13795596602771049 0.001131001131001131 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 29440 17074 FVHDLVLYL True NCI_RA007_Epitope_Rep2 1117.6171817688898 1117.6160899358601 71.151 2 0.13794570940200873 0.001131001131001131 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 53641 17548 KWNPTAGVAF True PC9_epitope_Rep2 1089.56072952193 1089.5596299358601 72.77 2 0.13793794725973826 0.001131001131001131 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 96719 5820 SEQETLVRP True H1975_Epitope_Rep2 1057.54038800017 1057.53928993586 27.378 2 0.13793771614881623 0.001131001131001131 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'MDM2|p.H134Qfs*73|1|0.37|ENSG00000135679|chr12:68824406-68824409|CCTT/-|frameshift_variant', 'MDM2-NUP107|3|fusion', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2', 'nc|ENSG00000135679|Q00987-7|MDM2', 'ENST00000493419.1_1_12:69202221-69210726:+|nuORF', 'nc|ENSG00000135679|Q00987-9|MDM2', 'nc|ENSG00000135679|Q00987-5|MDM2'] 132710 20643 VYSEVAAYEF True PC9_epitope_Rep5 1176.5339056373998 1176.53280993586 84.456 2 0.13793530262359713 0.001131001131001131 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 71429 22915 M[Oxidation]IPLLLAAL True PC9_epitope_Rep4 969.5932759006099 969.5921699358599 96.363 2 0.1379346902147608 0.001131001131001131 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 88190 19061 QYAGKYVLF True PC9_epitope_Rep5 1087.57023157647 1087.56912993586 78.347 2 0.1379251568585255 0.001131001131001131 0.9438714419765777 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 105565 13776 SVDSQILYY True H1975_Epitope_Rep2 1086.5233409537 1086.5222499358601 58.135 2 0.137920041654384 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 47659 12754 IYPPKLHQF True PC9_epitope_Rep5 1141.62841515893 1141.62676490379 54.065 3 0.1379192731284171 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 25887 10918 FGIDRPAEL True H1975_Epitope_Rep2 1016.5290950404799 1016.52798993586 47.027 2 0.13791122269899125 0.001131001131001131 0.9438714419765777 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 76649 12740 NTIESLKDV True PC9_epitope_Rep3 1017.5342399905699 1017.53314993586 54.025 2 0.13791096127189562 0.001131001131001131 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 110225 8379 TIEIITDR True NCI_RA007_Epitope_Rep4 959.52876068731 959.52766993586 39.043 2 0.13790990083487734 0.001131001131001131 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 60150 20094 LHYGLPVVV True PC9_epitope_Rep1 995.5804023373499 995.57930993586 82.119 2 0.1378982045026837 0.001131001131001131 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 139926 19783 YVFPGVTRL True PC9_epitope_Rep3 1050.58621599378 1050.5851099358601 81.326 2 0.13789203150621215 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 108382 10159 TEDWDQPVA True H1975_Epitope_Rep1 1059.45090428943 1059.44980993586 44.015 2 0.13788294777615293 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 89064 8642 REELSNVLA True H1975_Epitope_Rep2 1029.5454733806098 1029.54436993586 38.2 2 0.1378803438769022 0.001131001131001131 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 3255 4770 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 25.798 2 0.13787976220874876 0.001131001131001131 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 94755 15493 RYLPDTLLL True NCI_RA007_Epitope_Rep2 1102.63864548946 1102.63754993586 64.968 2 0.13787625772846845 0.001131001131001131 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 32423 6660 GGGQIIPTAR True PC9_epitope_Rep6 968.5403284305199 968.53922993586 34.358 2 0.13787424148888813 0.001131001131001131 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 52459 11824 KPIEELQNV True PC9_epitope_Rep3 1068.58152453616 1068.5804299358601 50.498 2 0.13787346578482873 0.001131001131001131 0.9438714419765777 ['ENSG00000166920|ENST00000396650|C15orf48'] 54244 20828 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61157496793 88.265 1 0.1378724887300694 0.001131001131001131 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 47075 17868 IVVDNVPQV True PC9_epitope_Rep5 981.5494961318899 981.54838993586 73.748 2 0.13787111101128674 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 71319 21049 MHFLENISL True PC9_epitope_Rep3 1102.5481162329 1102.5470099358602 86.244 2 0.13785911000863652 0.001131001131001131 0.9438714419765777 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 47476 12468 IYKDYQYYF True NCI_RA007_Epitope_Rep4 1301.59684024713 1301.59574993586 54.966 2 0.13785749131352962 0.001131001131001131 0.9438714419765777 ['ENSG00000260314|ENST00000569591|MRC1'] 6095 11403 APM[Oxidation]PPIIHA True PC9_epitope_Rep3 961.50552352537 961.50442993586 48.864 2 0.13785252882090993 0.001131001131001131 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 57989 4755 LEQTPEQQAA True H1975_Epitope_Rep2 1113.53021723929 1113.52912993586 23.379 2 0.13785067131674508 0.001131001131001131 0.9438714419765777 ['ENST00000560311.1_1_14:24634973-24635402:+|nuORF', 'ENST00000557894.5_1_14:24634074-24635402:+|nuORF', 'ENST00000561415.1_1_14:24633725-24635402:+|nuORF', 'ENSG00000213928|ENST00000396864|IRF9'] 37214 22328 GVVDIFQTV True PC9_epitope_Rep1 976.52294703088 976.52184993586 90.699 2 0.13784613247530672 0.001131001131001131 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 114191 12781 TRTSQVLVI True PC9_epitope_Rep2 1015.6025943339098 1015.60148993586 54.465 2 0.13784262853792037 0.001131001131001131 0.9438714419765777 ['ENSG00000147689|ENST00000690554|FAM83A', 'nc|ENSG00000147689|Q86UY5-3|FAM83A', 'ENST00000521468.1_1_8:124195447-124212099:+|nuORF'] 103150 20748 SQNDGFFAV True PC9_epitope_Rep1 983.4348603024699 983.43431496793 84.634 1 0.13784259988556466 0.001131001131001131 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 6608 17776 APWPPKGLVPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 76.404 2 0.13783764766074555 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 71127 18325 M[Oxidation]ETVWTILP True H1975_Epitope_Rep3 1104.55253328744 1104.5514299358601 76.799 2 0.13783106196252337 0.001131001131001131 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 75666 16475 NQTPVTLQV True PC9_epitope_Rep1 998.5396597241801 998.53911496793 68.197 1 0.13782973056200507 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 75777 4276 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 23.47 2 0.1378297301370652 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 71312 10981 MHFESGSTL True PC9_epitope_Rep2 1007.43823143075 1007.43712993586 47.561 2 0.1378292227628187 0.001131001131001131 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 7275 10959 ARPPGYEF True PC9_epitope_Rep5 935.45011644379 935.44900993586 47.143 2 0.13782390804614336 0.001131001131001131 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 104130 5550 SRYSSTETL True PC9_epitope_Rep4 1042.49310345458 1042.49200993586 28.114 2 0.13782249313950395 0.001131001131001131 0.9438714419765777 ['ARHGEF17|p.G618Wfs*4|1|0.39|ENSG00000110237|chr11:73310481-73310482|-/C|frameshift_variant', 'ENSG00000110237|ENST00000263674|ARHGEF17'] 99059 11717 SKVSILESL True NCI_RA007_Epitope_Rep3 974.56481184286 974.56370993586 53.202 2 0.13782186365594504 0.001131001131001131 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 102999 16181 SQISDTSVVL True PC9_epitope_Rep6 1047.5448046742702 1047.54427496793 74.595 1 0.13781905135088632 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 10048 19771 AYVGDLQTL True PC9_epitope_Rep3 978.5022115863 978.50110993586 81.277 2 0.13781327185054884 0.001131001131001131 0.9438714419765777 ['ENSG00000065802|ENST00000264607|ASB1'] 138833 8619 YSDKYGLGY True H1975_Epitope_Rep3 1064.48147614172 1064.4803699358602 38.146 2 0.13781095763312254 0.001131001131001131 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 90955 7710 RLFVGSIPK True NCI_RA007_Epitope_Rep5 1015.6178504752298 1015.61674993586 36.358 2 0.13780929662445532 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 32082 7712 GEYDHLPEQA True H1975_Epitope_Rep1 1157.4989171110099 1157.4978299358602 34.626 2 0.13780855926942817 0.001131001131001131 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 107048 15280 SYLPLAHMF True NCI_RA007_Epitope_Rep3 1077.53173789277 1077.53064993586 67.651 2 0.13780558104179985 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 63706 17632 LPQLPITNF True H1975_Epitope_Rep1 1041.58588164061 1041.58537496793 73.364 1 0.1377892197264493 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 91880 10783 RPNSLVGITSA True PC9_epitope_Rep4 1113.61422164677 1113.6131299358601 49.235 2 0.13778752851282278 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 36561 19798 GVLDTLTKV True PC9_epitope_Rep3 944.55424715916 944.55314993586 81.385 2 0.13777789810959262 0.001131001131001131 0.9438714419765777 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 43432 13352 IHSPVVNEL True PC9_epitope_Rep5 1006.54474510462 1006.54364993586 56.372 2 0.1377758764741954 0.001131001131001131 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 84587 7904 QHDPETSVL True PC9_epitope_Rep2 1024.48253877088 1024.4814499358602 35.768 2 0.13776972353531 0.001131001131001131 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 46130 5494 ITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep1 1047.56343232431 1047.5623299358601 25.441 2 0.1377601018571122 0.001131001131001131 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 76267 11518 NSDNNTIFV True H1975_Epitope_Rep2 1022.46688870674 1022.46578993586 49.362 2 0.13775863293031076 0.001131001131001131 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 88199 22422 QYAPLLAVF True PC9_epitope_Rep4 1020.5644179200399 1020.56387496793 94.478 1 0.1377580030705307 0.001131001131001131 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 36400 16393 GVIDLIFEK True NCI_RA007_Epitope_Rep1 1032.58554728744 1032.5844499358602 67.878 2 0.13775799430150226 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 73816 11005 NHDTGEYVL True PC9_epitope_Rep5 1046.46688870674 1046.4657899358601 47.319 2 0.13775415785787018 0.001131001131001131 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 7965 15342 ATDLDVANFY True H1975_Epitope_Rep1 1127.51350454599 1127.51297496793 64.281 1 0.13775409862053278 0.001131001131001131 0.9438714419765777 ['ENSG00000142252|ENST00000270257|GEMIN7'] 103549 10549 SRDDTTLNAL True PC9_epitope_Rep2 1104.54111627616 1104.54000993586 45.896 2 0.13775101994469652 0.001131001131001131 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 52842 14174 KQWFNLNSL True NCI_RA007_Epitope_Rep3 1148.59784330664 1148.59674993586 63.042 2 0.13774808634733718 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000066427|P54252-1|ATXN3', 'ENST00000553309.5_1_14:92547307-92572896:-|nuORF', 'nc|ENSG00000066427|P54252-4|ATXN3', 'ENSG00000066427|ENST00000644486|ATXN3', 'ENST00000555816.5_1_14:92547404-92563043:-|nuORF', 'ENST00000554214.5_1_14:92547307-92562474:-|nuORF', 'ENST00000555958.5_1_14:92547307-92572896:-|nuORF', 'nc|ENSG00000066427|P54252-3|ATXN3'] 125458 8268 VLTVINQTQK True PC9_epitope_Rep2 1142.66592286646 1142.66482993586 37.162 2 0.13774790086205116 0.001131001131001131 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 5418 16304 ALVVQVAEA True PC9_epitope_Rep2 898.5123823471799 898.5118349679301 67.958 1 0.13774617047145882 0.001131001131001131 0.9438714419765777 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 94986 10206 RYQDIIHSI True NCI_RA007_Epitope_Rep2 1143.6036569630699 1143.60254993586 44.287 2 0.13774523105117192 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 88292 18241 QYILFPLRF True NCI_RA007_Epitope_Rep4 1195.67536535135 1195.6742699358601 78.914 2 0.1377445529842264 0.001131001131001131 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 11648 7511 DHDENVAL True PC9_epitope_Rep4 911.39847479375 911.39736993586 36.258 2 0.13774022448249454 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 123098 12349 VHAQIVSTL True PC9_epitope_Rep1 966.5498304850599 966.54872993586 52.357 2 0.1377396005905879 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 74819 17666 NLPDEIYHV True PC9_epitope_Rep5 1098.5345743437401 1098.53346993586 72.966 2 0.1377256292112016 0.001131001131001131 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 54378 16071 KYQIINEEF True PC9_epitope_Rep4 1182.5920892198599 1182.59098993586 69.752 2 0.13771680041218456 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 116679 15631 TYIQKIFRM True PC9_epitope_Rep6 1198.65325000778 1198.65160490379 72.326 3 0.13771165137797342 0.001131001131001131 0.9438714419765777 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 30014 17360 FYHKYFNYL True PC9_epitope_Rep2 1293.61824439805 1293.6171499358602 72.027 2 0.13770976176635868 0.001131001131001131 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 21111 13671 ERDPSPWAV True PC9_epitope_Rep2 1055.50360856863 1055.5025099358602 57.876 2 0.1377092672719187 0.001131001131001131 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 38789 7365 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.5406899358602 33.71 2 0.13770697623228023 0.001131001131001131 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 61278 16961 LLDTELDLY True H1975_Epitope_Rep2 1093.55430672881 1093.5532099358602 70.485 2 0.1377031795502617 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 60336 18398 LIGEFLEKV True PC9_epitope_Rep6 1046.60119735158 1046.60010993586 83.414 2 0.13769685261663758 0.001131001131001131 0.9438714419765777 ['RNMT|p.G312Afs*13|2|0.13|ENSG00000101654|chr18:13741648-13741648|G/-|frameshift_variant', 'ENSG00000101654|ENST00000383314|RNMT', 'nc|ENSG00000101654|O43148-2|RNMT'] 97666 18901 SHDEVFVVL True PC9_epitope_Rep4 1043.52876068731 1043.52766993586 80.79 2 0.13769571755461477 0.001131001131001131 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 103341 19299 SQVEEELFSV True PC9_epitope_Rep6 1165.55028397753 1165.54918993586 86.88 2 0.13768633077876336 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 31721 10718 GEISALTAEA True H1975_Epitope_Rep1 960.47639076128 960.47584496793 46.188 1 0.1376756006305994 0.0011652748106428432 0.9438714419765777 ['ENSG00000125968|ENST00000376112|ID1'] 3910 15258 AHDDSVMYL True PC9_epitope_Rep5 1049.44879611445 1049.4476899358601 63.699 2 0.13767195289881115 0.0011652748106428432 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 98264 4339 SIFEPAKGGEK True NCI_RA007_Epitope_Rep3 1161.6029882567298 1161.60133490379 23.816 3 0.13766227895011893 0.0011652748106428432 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 53441 14622 KVIDEIYRV True PC9_epitope_Rep3 1133.64445914589 1133.6433699358602 61.372 2 0.13766189444445276 0.0011652748106428432 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 24268 22939 FAADIISVL True PC9_epitope_Rep5 947.53278343859 947.53168993586 93.225 2 0.13765651568283999 0.0011652748106428432 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 118909 3777 VEEPSRPSA True H1975_Epitope_Rep2 970.4719740871799 970.47086993586 19.539 2 0.13764759899556236 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'chr12:2868754-2872102|108|24.14|0.02|10.23|-|0|FOXM1,None|1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 17617 6488 EHNDLQYAA True PC9_epitope_Rep4 1059.46213767947 1059.46104993586 32.074 2 0.13764537845334393 0.0011652748106428432 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 70293 21055 LYPEGLAQL True PC9_epitope_Rep1 1002.5385970950199 1002.53807496793 85.818 1 0.1376416986606802 0.0011652748106428432 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 131703 17684 VWSDVTPLTF True NCI_RA007_Epitope_Rep3 1163.58627556343 1163.5857749679299 77.545 1 0.13764030455591864 0.0011652748106428432 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 12559 9005 DLDHSIGTQY True H1975_Epitope_Rep2 1147.51456717515 1147.51346993586 39.589 2 0.13763789171499993 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4'] 102159 12680 SPRPPLISV True PC9_epitope_Rep6 964.57056592964 964.56946993586 60.245 2 0.1376375534846884 0.0011652748106428432 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 75011 23187 NMAELFAVV True PC9_epitope_Rep1 992.5001034113199 992.49900993586 93.983 2 0.13763612733526412 0.0011652748106428432 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000530983.5_1_8:145651064-145651211:-|nuORF', 'ENST00000526977.5_1_8:145650235-145651211:-|nuORF', 'ENST00000528142.5_1_8:145649272-145651551:-|nuORF'] 18335 21078 EIVTTIPTI True PC9_epitope_Rep5 985.56956287013 985.56846993586 86.137 2 0.1376350558121184 0.0011652748106428432 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 125401 9814 VLTEIIASR True NCI_RA007_Epitope_Rep2 1000.5916952970399 1000.59058993586 42.797 2 0.13762895770406974 0.0011652748106428432 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 76279 9930 NSDPNLHLL True NCI_RA007_Epitope_Rep3 1021.5192586327701 1021.51816993586 46.142 2 0.13762725115711588 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 75433 9946 NQGESITHAL True PC9_epitope_Rep3 1068.51998690876 1068.5188899358602 43.211 2 0.1376267179722061 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 77486 9019 NYPQSVPRL True NCI_RA007_Epitope_Rep4 1072.56654317836 1072.5654499358602 41.524 2 0.1376256943722895 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 29791 8958 FVTFDDHD True NCI_RA007_Epitope_Rep5 994.40322582102 994.40212993586 41.116 2 0.13762326556786 0.0011652748106428432 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 134880 12301 YADEYAIGY True H1975_Epitope_Rep2 1063.4498416602698 1063.44927496793 52.399 1 0.13762314551607263 0.0011652748106428432 0.9438714419765777 ['ENSG00000108773|ENST00000225916|KAT2A', 'nc|ENSG00000108773|Q92830-2|KAT2A', 'ENST00000468111.1_1_3:20168975-20187957:+|nuORF', 'ENSG00000114166|ENST00000263754|KAT2B', 'KAT2B|p.A679Hfs*22|1|0.3|ENSG00000114166|chr3:20146345-20146345|G/-|frameshift_variant'] 8152 6781 ATFPDPNVK True NCI_RA007_Epitope_Rep3 987.5025459394699 987.50144993586 33.775 2 0.13761713916168494 0.0011652748106428432 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 107021 14924 SYLNSVQRL True PC9_epitope_Rep1 1078.5771078620598 1078.5760099358602 62.227 2 0.13761547345640932 0.0011652748106428432 0.9438714419765777 ['ENSG00000136243|ENST00000258742|NUP42', 'nc|ENSG00000136243|O15504-2|NUP42'] 68794 15214 LVDPYMHEV True PC9_epitope_Rep5 1101.51648175145 1101.5153899358602 63.529 2 0.13761101872847895 0.0011652748106428432 0.9438714419765777 ['ENSG00000064313|ENST00000378164|TAF2'] 39225 14163 HLIGDFSKV True PC9_epitope_Rep5 1014.54983048506 1014.54872993586 59.489 2 0.1376110129357075 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000158402|P30307-4|CDC25C', 'nc|ENSG00000158402|P30307-3|CDC25C', 'nc|ENSG00000158402|P30307-2|CDC25C', 'ENSG00000158402|ENST00000323760|CDC25C'] 107070 19736 SYLSSILRF True PC9_epitope_Rep6 1084.59169529704 1084.5905899358602 88.572 2 0.1376037611312269 0.0011652748106428432 0.9438714419765777 ['ENST00000529795.1_1_11:66001292-66002875:+|nuORF', 'ENSG00000175115|ENST00000320580|PACS1', 'nc|ENSG00000175115|Q6VY07-2|PACS1'] 23621 19091 EYFKSFNF True PC9_epitope_Rep4 1080.4916469026 1080.4905499358601 81.524 2 0.1376014433543741 0.0011652748106428432 0.9438714419765777 ['ENSG00000151470|ENST00000425929|C4orf33'] 135763 15974 YENELMLMA True H1975_Epitope_Rep1 1112.48821839828 1112.48767496793 66.767 1 0.13757786117183418 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 138464 15574 YRFNGQYSSL True PC9_epitope_Rep3 1233.5778361380499 1233.5767299358602 65.054 2 0.13757492023704976 0.0011652748106428432 0.9438714419765777 ['ENSG00000182087|ENST00000356663|TMEM259'] 88188 19155 QYAGKYVLF True PC9_epitope_Rep1 1087.57023157647 1087.56912993586 78.473 2 0.13756252212068057 0.0011652748106428432 0.9438714419765777 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 17208 16026 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50652993586 66.793 2 0.13756124947556933 0.0011652748106428432 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 42467 4042 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 20.677 2 0.13755514320295673 0.0011652748106428432 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 93973 8795 RVNKAFVNV True PC9_epitope_Rep5 1045.6032630402499 1045.60216993586 38.772 2 0.13755298698632232 0.0011652748106428432 0.9438714419765777 ['ENSG00000176731|ENST00000619594|RBIS'] 95394 8790 SAINEVVTR True PC9_epitope_Rep3 987.53490869691 987.53380993586 38.762 2 0.137544891521853 0.0011652748106428432 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 38650 6346 HHMGGMAGL True PC9_epitope_Rep4 909.3949271501299 909.39382993586 31.487 2 0.1375373471191837 0.0011652748106428432 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 95195 3373 SAAIPAAGK True NCI_RA007_Epitope_Rep4 784.44430278736 784.44320993586 18.798 2 0.13753177709578182 0.0011652748106428432 0.9438714419765777 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 138238 9189 YQTEKGITV True PC9_epitope_Rep3 1037.5393253710097 1037.53822993586 40.284 2 0.1375271967601322 0.0011652748106428432 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 35051 19408 GRDLTDYLM True PC9_epitope_Rep2 1082.50664534374 1082.50554993586 80.031 2 0.13752635336710697 0.0011652748106428432 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 377 15824 AALDIYETL True NCI_RA007_Epitope_Rep4 1007.51752729727 1007.51642993586 68.725 2 0.13752402745445133 0.0011652748106428432 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ITCH-DYNLRB1|4|fusion', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH'] 96306 7733 SEETPLTAA True H1975_Epitope_Rep2 917.4341915961298 917.43364496793 34.697 1 0.13752075907302094 0.0011652748106428432 0.9438714419765777 ['ENSG00000182154|ENST00000371443|MRPL41'] 39880 21647 HQILTPFLL True PC9_epitope_Rep3 1080.6331661862 1080.63206993586 88.564 2 0.13751794551219096 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 5163 8120 ALPDQGIAKA True PC9_epitope_Rep2 982.5447451046199 982.54364993586 36.592 2 0.13751740769214496 0.0011652748106428432 0.9438714419765777 ['ENSG00000089289|ENST00000356413|IGBP1'] 92421 9109 RQSDLLVKL True NCI_RA007_Epitope_Rep4 1070.64479349906 1070.64368993586 41.877 2 0.13751716855183718 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000508212.5_1_4:122723919-122731001:+|nuORF', 'EXOSC9|p.M217Rfs*6|1|0.23|ENSG00000123737|chr4:121810011-121810011|T/-|frameshift_variant'] 94769 17244 RYLPKGFLNQF True PC9_epitope_Rep6 1381.7506555499297 1381.7490149037899 78.926 3 0.13750852732700272 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 116933 18281 TYPENWRAF True PC9_epitope_Rep1 1182.5458077337798 1182.54470993586 75.108 2 0.1375049809032057 0.0011652748106428432 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 72918 16820 NAYTGIVLL True H1975_Epitope_Rep2 962.54368247546 962.54258993586 69.945 2 0.13750203572697797 0.0011652748106428432 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 4015 4604 AHIPKSDAL True PC9_epitope_Rep4 950.5185303567799 950.51742993586 24.215 2 0.13750184927035566 0.0011652748106428432 0.9438714419765777 ['NFE2L2-PDE11A|3|fusion', 'NFE2L2-PDE11A|1|fusion', 'NFE2L2-PDE11A|2|fusion', 'nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 132598 12939 VYPPPHQVF True PC9_epitope_Rep5 1082.5549158654999 1082.55380993586 54.781 2 0.13750165200267478 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 46182 8848 ITDHGSLIY True H1975_Epitope_Rep2 1017.51311062317 1017.51200993586 39.001 2 0.1374992876391603 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 138979 9956 YSEVYPGQQY True H1975_Epitope_Rep1 1232.5349682665599 1232.5338699358601 43.232 2 0.13749663093803055 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 103266 14339 SQTDVKTFL True PC9_epitope_Rep5 1037.53932537101 1037.53822993586 60.156 2 0.13748566583418304 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF'] 43041 12128 IGGIGTVPVGR True PC9_epitope_Rep2 1024.6029286870798 1024.60182993586 51.96 2 0.13748197119155023 0.0011652748106428432 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 133274 12265 WEIENNPTV True H1975_Epitope_Rep3 1100.51383889916 1100.51274993586 52.355 2 0.13748086079848207 0.0011652748106428432 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 106463 17904 SVVELVNKL True PC9_epitope_Rep4 999.5964463243099 999.59534993586 76.909 2 0.13747828018829178 0.0011652748106428432 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 33827 13331 GLVDEKALAQA True PC9_epitope_Rep2 1113.60298825673 1113.60188993586 56.55 2 0.13746040721371847 0.0011652748106428432 0.9438714419765777 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF', 'ENST00000511907.1_1_4:1208072-1210006:-|nuORF', 'ENSG00000175029|ENST00000309035|CTBP2', 'nc|ENSG00000175029|P56545|CTBP2', 'nc|ENSG00000175029|P56545-3|CTBP2', 'nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1'] 94479 16936 RYGPIVDVY True PC9_epitope_Rep5 1080.56039516876 1080.55928993586 70.16 2 0.1374586418870652 0.0011652748106428432 0.9438714419765777 ['ENSG00000154548|ENST00000452027|SRSF12', 'nc|ENSG00000188529|O75494-5|SRSF10', 'nc|ENSG00000188529|O75494-4|SRSF10', 'nc|ENSG00000188529|O75494-6|SRSF10', 'nc|ENSG00000188529|O75494-3|SRSF10', 'nc|ENSG00000188529|O75494-2|SRSF10', 'ENSG00000188529|ENST00000492112|SRSF10'] 32103 11221 GEYGKFFVT True NCI_RA007_Epitope_Rep5 1046.50729696674 1046.5061899358602 49.797 2 0.1374565261216867 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 31665 7408 GEIASFDKA True NCI_RA007_Epitope_Rep2 936.4552613938799 936.45416993586 33.441 2 0.1374551959808646 0.0011652748106428432 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 28899 9881 FTEEELARY True H1975_Epitope_Rep3 1156.5400536469997 1156.53894993586 43.038 2 0.13744833712515223 0.0011652748106428432 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 73276 5730 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 27.039 2 0.1374473422703951 0.0011652748106428432 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 103688 7850 SRDQSTPII True PC9_epitope_Rep4 1015.5298233164699 1015.52872993586 37.609 2 0.137446867604068 0.0011652748106428432 0.9438714419765777 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 24316 12231 FADGHVLEL True H1975_Epitope_Rep2 999.5025459394699 999.50144993586 52.131 2 0.1374451678951773 0.0011652748106428432 0.9438714419765777 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 105709 12268 SVHKGFAFV True PC9_epitope_Rep1 990.5287011176598 990.52760993586 52.045 2 0.13744093152371586 0.0011652748106428432 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 37982 5672 HEGPGSELP True H1975_Epitope_Rep2 921.4192102383299 921.41810993586 26.814 2 0.13743214383562466 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENSG00000204843|ENST00000628224|DCTN1'] 77581 10430 NYSSAVQKF True PC9_epitope_Rep5 1042.5083595959 1042.5072699358602 45.106 2 0.1374190239041901 0.0011652748106428432 0.9438714419765777 ['ENSG00000079482|ENST00000355520|OPHN1', 'nc|ENSG00000079482|O60890-2|OPHN1'] 86951 15304 QRVDNIEVL True PC9_epitope_Rep5 1084.58767254576 1084.58656993586 63.876 2 0.1374103992123458 0.0011652748106428432 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 93611 12974 RTADGEFMAV True PC9_epitope_Rep2 1095.50189431647 1095.5007899358602 55.196 2 0.13740861950516303 0.0011652748106428432 0.9438714419765777 ['ENST00000506639.5_1_5:33994220-34005893:-|nuORF', 'ENSG00000242110|ENST00000335606|AMACR', 'nc|ENSG00000242110|Q9UHK6-5|AMACR'] 32043 7830 GEVLISRV True NCI_RA007_Epitope_Rep3 871.51271670035 871.51160993586 37.921 2 0.13739599457433024 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000161203|Q96CW1-2|AP2M1', 'ENSG00000161203|ENST00000292807|AP2M1', 'ENST00000484469.5_1_3:183894781-183895400:+|nuORF', 'ENST00000466598.5_1_3:183894781-183896942:+|nuORF', 'ENST00000487958.5_1_3:183894781-183898060:+|nuORF', 'ENST00000472560.5_1_3:183894781-183898834:+|nuORF'] 87569 5285 QTMSDTTFK True NCI_RA007_Epitope_Rep4 1057.47501086229 1057.47390993586 26.88 2 0.13739263716023015 0.0011652748106428432 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF', 'CTTNBP2NL-CAPZA1|1|fusion'] 6129 9541 APNLQNQQV True PC9_epitope_Rep5 1010.5145076055 1010.51340993586 41.658 2 0.1373913924492485 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 43614 19287 IIIPEIQKV True PC9_epitope_Rep3 1051.66413196131 1051.66302993586 79.409 2 0.13739000705624302 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 109644 12681 THDLVGPEL True PC9_epitope_Rep4 979.49746055903 979.49636993586 56.624 2 0.1373877540765036 0.0011652748106428432 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 27974 19837 FQSSAVMAL True PC9_epitope_Rep5 952.4688032830398 952.46770993586 81.35 2 0.13738534161828825 0.0011652748106428432 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 123290 16273 VHSEQVFAL True PC9_epitope_Rep3 1028.5290950404797 1028.5279899358602 67.732 2 0.13738439717037626 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 96352 12880 SEFSSVLAA True H1975_Epitope_Rep2 909.4443623570098 909.44381496793 54.655 1 0.1373831397768833 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7', 'nc|ENSG00000292366|P51809-3|VAMP7'] 111167 12007 TLETVPLER True PC9_epitope_Rep5 1056.5815245361598 1056.5804299358601 51.179 2 0.137380909450265 0.0011652748106428432 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1'] 105702 13400 SVHGDFLNV True PC9_epitope_Rep6 986.48214484806 986.48104993586 63.216 2 0.1373796703493573 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 49484 11569 KIYEGQVEV True PC9_epitope_Rep5 1063.55497543515 1063.5538699358601 49.494 2 0.1373721575450132 0.0011652748106428432 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 102818 20835 SQFPGAITL True PC9_epitope_Rep2 932.4967322830399 932.49562993586 85.588 2 0.13734136848921602 0.0011652748106428432 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 112948 7075 TPRSTVGVAV True PC9_epitope_Rep4 985.5556441414898 985.55454993586 34.48 2 0.1373402253696024 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 1449 7394 AEEIPSRIQA True H1975_Epitope_Rep2 1112.58258716532 1112.5814899358602 33.383 2 0.13733128997778027 0.0011652748106428432 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 48820 5194 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 25.072 2 0.13733017279005202 0.0011652748106428432 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 131110 6461 VVNFGPGPAK True H1975_Epitope_Rep3 984.5392658013598 984.53816993586 29.824 2 0.13732811659883792 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 129420 13525 VTEIMSMGY True H1975_Epitope_Rep2 1029.45110461357 1029.4500099358602 57.16 2 0.13732640223488443 0.0011652748106428432 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 103331 15425 SQVDRLVALA True PC9_epitope_Rep6 1070.6084079903399 1070.60730993586 71.488 2 0.1373217316747697 0.0011652748106428432 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 54381 15102 KYQIINEEF True PC9_epitope_Rep6 1182.5920892198599 1182.59098993586 70.148 2 0.13732131929489802 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 125342 12047 VLSIGDGIAR True PC9_epitope_Rep6 999.5712942056299 999.57018993586 57.642 2 0.13732127031529812 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF', 'ENST00000590448.5_1_18:43669752-43675082:-|nuORF'] 1120 5791 AEAPPPPPP True H1975_Epitope_Rep3 871.44396843419 871.44286993586 27.299 2 0.13731553186348702 0.0011652748106428432 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 16045 9361 EEALPVTTA True H1975_Epitope_Rep2 929.47057710485 929.47002496793 40.969 1 0.13731309579141826 0.0011652748106428432 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 72146 20406 M[Oxidation]RFLAATFL True PC9_epitope_Rep2 1084.57393743836 1084.57282993586 83.917 2 0.13731106749667737 0.0011652748106428432 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 17417 7103 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.53465490379 32.29 3 0.13730652349214076 0.0011652748106428432 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 7992 7242 ATDPNILGR True NCI_RA007_Epitope_Rep2 955.50869394907 955.50758993586 32.789 2 0.13730637169855897 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'ENST00000536483.1_1_8:48686736-48691238:-|nuORF'] 24555 20970 FALPGLLHA True PC9_epitope_Rep1 937.5385375253701 937.53744993586 85.486 2 0.1373012243443395 0.0011652748106428432 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 21149 17000 ERDSVVLSL True PC9_epitope_Rep5 1016.5502244078799 1016.54912993586 70.409 2 0.1372991830731378 0.0011652748106428432 0.9438714419765777 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 60554 10213 LIQDRVAEV True PC9_epitope_Rep4 1041.5818588893299 1041.5807699358602 46.961 2 0.13729797099237007 0.0011652748106428432 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 113124 12307 TQAPGNPVL True PC9_epitope_Rep3 895.4763311916299 895.47578496793 52.363 1 0.1372897599174925 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 133506 7170 WHDAENQTV True PC9_epitope_Rep5 1098.47303671634 1098.47192993586 32.546 2 0.13728019653338894 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 98508 18528 SILFVPTSAPR True PC9_epitope_Rep5 1186.6710082468999 1186.66990993586 76.292 2 0.1372800585425239 0.0011652748106428432 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 34696 19453 GQLSEGAIAAI True PC9_epitope_Rep5 1028.5502244078798 1028.54912993586 79.876 2 0.13727888824005582 0.0011652748106428432 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 37741 11339 HAVGDIPGV True PC9_epitope_Rep2 863.45011644379 863.44900993586 48.935 2 0.13727826691334435 0.0011652748106428432 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 9403 7352 AVVGVVAGGGR True PC9_epitope_Rep3 940.5454138109598 940.54430993586 33.287 2 0.1372781836860761 0.0011652748106428432 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8'] 836 9230 ADEGISFR True PC9_epitope_Rep2 893.42429561877 893.42318993586 40.843 2 0.1372724947079756 0.0011652748106428432 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 26208 9504 FHTTPNTSL True PC9_epitope_Rep5 1016.49270953176 1016.49160993586 41.513 2 0.13727043635138803 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 116498 9296 TYDNVHQQF True PC9_epitope_Rep1 1150.5043368446202 1150.5032299358602 40.611 2 0.13726586385613873 0.0011652748106428432 0.9438714419765777 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 96773 8477 SEQPTLVTA True H1975_Epitope_Rep3 944.4814761417199 944.48036993586 37.592 2 0.13726423685365405 0.0011652748106428432 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 89616 9095 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.54912993586 39.934 2 0.13725460333782613 0.001197003629623909 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 19684 20381 ELSDFISYL True H1975_Epitope_Rep3 1085.52809198097 1085.52698993586 85.216 2 0.13725033325023636 0.001197003629623909 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000497349.1_1_15:44062673-44063413:+|nuORF'] 4159 10794 AHYSAVTSL True PC9_epitope_Rep5 947.47124581119 947.47014993586 46.509 2 0.13724415615391736 0.001197003629623909 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 75519 3898 NQKDPGVLDR True NCI_RA007_Epitope_Rep2 1140.58873517492 1140.5876299358601 19.797 2 0.13724383149593652 0.001197003629623909 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 6299 5142 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 25.157 2 0.13724302842802458 0.001197003629623909 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 31965 7443 GESPVDYDGGR True PC9_epitope_Rep5 1150.4890807032998 1150.48798993586 33.584 2 0.13723835269547305 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 76775 14963 NVDAILEEY True H1975_Epitope_Rep3 1064.50260550912 1064.50207496793 62.943 1 0.1372344540457591 0.001197003629623909 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2'] 72380 9700 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4690749679298 42.295 1 0.13722879786946454 0.001197003629623909 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 4757 6824 ALEEAMEQK True PC9_epitope_Rep5 1047.4906609264297 1047.4895699358601 31.221 2 0.13722793900608535 0.001197003629623909 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 91823 6709 RPNDIM[Oxidation]AEV True PC9_epitope_Rep6 1059.50189469691 1059.5007899358602 34.577 2 0.13722592103950929 0.001197003629623909 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 105535 3200 SVDPKNYPK True NCI_RA007_Epitope_Rep2 1046.53965972418 1046.53856993586 17.093 2 0.13722035563718496 0.001197003629623909 0.9438714419765777 ['ENST00000491056.5_1_2:113587940-113590763:-|nuORF', 'ENSG00000125538|ENST00000263341|IL1B'] 87479 4706 QTETKTITY True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 23.194 2 0.13721499305047102 0.001197003629623909 0.9438714419765777 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF', 'EPB41L3|p.H979Q|1|0.29|ENSG00000082397|chr18:5396237-5396237|G/T|missense_variant'] 117447 5152 VADTPELQR True H1975_Epitope_Rep3 1027.52982331647 1027.5287299358602 24.921 2 0.1372054758847086 0.001197003629623909 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1'] 8794 19005 AVFDKTLAEL True PC9_epitope_Rep4 1105.60192562757 1105.60082993586 81.194 2 0.13720337035590474 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 423 17862 AALPNVYEV True PC9_epitope_Rep6 974.5072969667399 974.50618993586 81.334 2 0.13720248285108746 0.001197003629623909 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 47809 20151 IYSAERFLI True PC9_epitope_Rep1 1110.60734536118 1110.6062499358602 82.341 2 0.1372016542597191 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 6302 5407 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 26.192 2 0.13719729178548118 0.001197003629623909 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 9010 15068 AVIDVGINRV True PC9_epitope_Rep4 1054.61349337078 1054.6123899358602 65.891 2 0.13719487189478186 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 123119 18634 VHDEGVWAL True PC9_epitope_Rep3 1024.4977949121999 1024.49668993586 76.896 2 0.13719092405214944 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 24428 4523 FAGDDAPRA True NCI_RA007_Epitope_Rep5 918.4195445915 918.4184499358599 24.052 2 0.13718916254481459 0.001197003629623909 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 116559 22863 TYFSTPLLL True PC9_epitope_Rep2 1053.57464825057 1053.57354993586 93.432 2 0.13718905980507218 0.001197003629623909 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 10929 14661 DAVLLVFANK True NCI_RA007_Epitope_Rep2 1088.62299542532 1088.62188993586 61.695 2 0.13718807191387367 0.001197003629623909 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 12622 8793 DLEDSLAR True NCI_RA007_Epitope_Rep1 917.4454249861699 917.44432993586 38.205 2 0.13718585278915185 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 89296 5937 RELPFTKSA True NCI_RA007_Epitope_Rep4 1047.57129420563 1047.57018993586 29.456 2 0.1371855615656626 0.001197003629623909 0.9438714419765777 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENST00000506175.1_1_4:69188417-69195784:-|nuORF'] 119534 10273 VEQWPYRAVA True H1975_Epitope_Rep2 1217.61930702721 1217.61820993586 44.521 2 0.13718135629887807 0.001197003629623909 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 97668 17788 SHDEVFVVL True PC9_epitope_Rep6 1043.52876068731 1043.52766993586 81.056 2 0.13717513780923443 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 464 8877 AAMKALQAL True NCI_RA007_Epitope_Rep3 915.5211732090698 915.52006993586 42.009 2 0.1371689713446943 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'ENST00000521451.5_1_8:74528012-74659064:-|nuORF'] 34635 14457 GQIGMIQAL True NCI_RA007_Epitope_Rep5 929.5004377644899 929.49934993586 62.291 2 0.13716316517860966 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A4|p.A859V|1|0.26|ENSG00000132681|chr1:160176588-160176588|C/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF'] 86018 13912 QPITPGPSI True PC9_epitope_Rep4 908.4967322830399 908.49562993586 61.415 2 0.13716127813186554 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 103072 11250 SQLGIFISK True NCI_RA007_Epitope_Rep4 991.5702315764701 991.56912993586 50.165 2 0.13716110351485467 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 34950 19569 GQWSQGLISA True PC9_epitope_Rep5 1045.5192586327698 1045.5186749679299 80.323 1 0.13715308606974044 0.001197003629623909 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 88853 7929 REAEEPVFAA True H1975_Epitope_Rep3 1117.54038800017 1117.53928993586 35.469 2 0.13714938286818776 0.001197003629623909 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 26510 8736 FITAEELR True H1975_Epitope_Rep1 977.5181960036099 977.51708993586 38.531 2 0.13714892296345602 0.001197003629623909 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF'] 127951 11761 VRPPVQVY True PC9_epitope_Rep3 956.5443511817998 956.54324993586 50.258 2 0.13714631836310787 0.001197003629623909 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 103932 11190 SRPENAIIY True PC9_epitope_Rep5 1061.5505587610498 1061.54946993586 48.03 2 0.13713791028474512 0.001197003629623909 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 133198 4915 WEAEAGRSP True H1975_Epitope_Rep2 1001.4566583762098 1001.45556993586 23.988 2 0.13713777097954288 0.001197003629623909 0.9438714419765777 ['AluSp_dup17171|chr6:42956085-42956345:+|4.405465577973595|0.2092895351215914|4.4|502.0|1|1|sense', 'AluSq2_dup25958|chr8:11842628-11842936:-|1.0483672628645049|0.0949023208327711|3.47|501.0|1|1|sense', 'ENST00000530527.5_1_11:17308195-17312910:+|nuORF', 'ENST00000480615.1_1_2:96950685-96950910:-|nuORF', 'ENST00000595094.1_1_19:20736613-20844252:-|nuORF'] 129832 20951 VTLGPVPEI True PC9_epitope_Rep3 923.53278343859 923.53168993586 85.866 2 0.13713733571490322 0.001197003629623909 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 118815 8006 VEEFKSIPA True H1975_Epitope_Rep1 1018.5335117145798 1018.53240993586 35.739 2 0.13713558869570242 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'ENST00000493695.1_1_3:160132272-160134257:+|nuORF'] 35043 6493 GRDENSVEL True PC9_epitope_Rep4 1017.4727023631699 1017.47160993586 32.097 2 0.13713351013964883 0.001197003629623909 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 34933 18935 GQWIAETGV True PC9_epitope_Rep5 959.4712458111899 959.47014993586 77.856 2 0.13713292251839504 0.001197003629623909 0.9438714419765777 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 88852 8072 REAEEPVFAA True H1975_Epitope_Rep2 1117.54038800017 1117.53928993586 35.996 2 0.13713159540932748 0.001197003629623909 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 11717 18170 DHFQLSTSL True PC9_epitope_Rep5 1046.5032742154601 1046.5021699358601 74.901 2 0.13712126641075834 0.001197003629623909 0.9438714419765777 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'nc|ENSG00000050327|Q12774-2|ARHGEF5'] 1504 10891 AEEPGTFAV True H1975_Epitope_Rep2 919.4287122928699 919.42816496793 46.92 1 0.13711820666492178 0.001197003629623909 0.9438714419765777 ['ENSG00000188419|ENST00000357749|CHM'] 64009 5139 LQDAEIAR True NCI_RA007_Epitope_Rep1 914.4821448480599 914.48104993586 24.073 2 0.13711753615590727 0.001197003629623909 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 202 4698 AAFGGTFKK True NCI_RA007_Epitope_Rep4 925.5021520166499 925.50104993586 24.499 2 0.13711459591691147 0.001197003629623909 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 7460 14580 ASDMLQLEY True H1975_Epitope_Rep2 1068.4797618895598 1068.4786699358601 61.238 2 0.1371128039715739 0.001197003629623909 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 29866 18844 FVWSGTAEA True PC9_epitope_Rep5 966.4446967101799 966.44414496793 77.5 1 0.1371114414826788 0.001197003629623909 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 31883 5513 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 26.257 2 0.13710539478283618 0.001197003629623909 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 136466 5155 YHGNTNPEL True PC9_epitope_Rep4 1043.46722305991 1043.4661299358602 26.512 2 0.1371052414882286 0.001197003629623909 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 84589 8919 QHDPETSVL True PC9_epitope_Rep3 1024.48253877088 1024.4814499358602 39.258 2 0.13710309948917185 0.001197003629623909 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 8458 8588 ATSVITIVK True NCI_RA007_Epitope_Rep1 930.57498260374 930.57388993586 37.408 2 0.1370981426595542 0.001197003629623909 0.9438714419765777 ['ENSG00000197063|ENST00000357736|MAFG'] 42432 6357 IEQETPVSA True H1975_Epitope_Rep2 972.4763907612798 972.47584496793 29.38 1 0.13709745981608443 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2', 'ENST00000395449.7_1_11:47187835-47198404:-|nuORF'] 75790 12003 NRAQIQAVI True PC9_epitope_Rep3 1011.58252759567 1011.58142993586 51.196 2 0.13708825656139398 0.001197003629623909 0.9438714419765777 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 96039 4875 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 23.838 2 0.1370836120800284 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 83294 9717 QAIDSIHQV True PC9_epitope_Rep1 1009.51925863277 1009.51816993586 42.235 2 0.13707018582702624 0.001197003629623909 0.9438714419765777 ['ENSG00000066084|ENST00000301180|DIP2B', 'nc|ENSG00000151240|Q9Y2E4-2|DIP2C', 'ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A'] 76201 18069 NRVPAGNWVL True PC9_epitope_Rep3 1124.60907669668 1124.6079699358602 74.699 2 0.13706850086575773 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000590367.5_1_17:42931463-42950195:-|nuORF', 'ENST00000586276.5_1_17:42937766-42940268:-|nuORF'] 6867 13832 AQIGSYVHV True PC9_epitope_Rep3 972.50288029264 972.50178993586 58.285 2 0.13706439184487507 0.001197003629623909 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 120920 4086 VGEFSGANK True NCI_RA007_Epitope_Rep2 907.4399456829099 907.43884993586 20.532 2 0.13706227673023014 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF', 'ENST00000510190.1_1_4:77880016-77880280:-|nuORF'] 139501 13688 YTIDTENSTV True PC9_epitope_Rep5 1141.51389846881 1141.51280993586 57.678 2 0.13706144678147342 0.001197003629623909 0.9438714419765777 ['LSM14A-GPI|1|fusion', 'nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A', 'LSM14A-GPI|2|fusion'] 19315 8908 ELLYYANK True NCI_RA007_Epitope_Rep1 1012.5229470308799 1012.52184993586 38.65 2 0.13705572645228128 0.001197003629623909 0.9438714419765777 ['CON__P02769'] 67132 6899 LTDDKLSQY True H1975_Epitope_Rep3 1081.52915461013 1081.52804993586 31.496 2 0.13705292643324524 0.001197003629623909 0.9438714419765777 ['ENSG00000121879|ENST00000263967|PIK3CA'] 42732 16874 IFDLGGGTFD True H1975_Epitope_Rep3 1040.48147614172 1040.48097496793 70.458 1 0.13705274433149925 0.001197003629623909 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 21181 13682 EREQVIAAL True PC9_epitope_Rep1 1027.5662088251897 1027.5651099358602 57.481 2 0.13705137713973647 0.001197003629623909 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 40002 15295 HQSGIVQLL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 70.95 2 0.13704038239967858 0.001197003629623909 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 105154 5036 STMGYMAAK True NCI_RA007_Epitope_Rep3 958.4252242188999 958.42412993586 26.803 2 0.13703941830856392 0.001197003629623909 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 115825 14789 TVMDSKIVQV True PC9_epitope_Rep5 1118.60054572858 1118.59944993586 61.886 2 0.13703457136109146 0.001197003629623909 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 113285 10086 TQHAVGIVV True PC9_epitope_Rep2 922.5236157372199 922.52250993586 44.126 2 0.13703135665404145 0.001197003629623909 0.9438714419765777 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 15147 12331 EAEPHPLWEY True H1975_Epitope_Rep2 1269.56660274801 1269.56550993586 52.515 2 0.1370272743463256 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 1001 8363 AEAEPEPELA True H1975_Epitope_Rep2 1054.4818700645399 1054.48076993586 37.12 2 0.13702438571764922 0.001197003629623909 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion'] 112463 5735 TNQELQEINR True NCI_RA007_Epitope_Rep5 1243.61567819875 1243.61458993586 28.747 2 0.1370231714614476 0.001197003629623909 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 96762 8341 SEQPTLVTA True H1975_Epitope_Rep1 944.4814761417199 944.48092496793 37.015 1 0.13702156539651114 0.001197003629623909 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 74220 12262 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 52.249 2 0.13701248715747485 0.001197003629623909 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 137156 21398 YLDPSVLSGV True PC9_epitope_Rep1 1048.54407639828 1048.54357496793 87.141 1 0.1370038311920053 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 65372 10336 LSEPSSLQY True H1975_Epitope_Rep3 1022.49204082542 1022.49147496793 44.809 1 0.13700278303935118 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 66582 5494 LSSPATLNSR True NCI_RA007_Epitope_Rep4 1044.5563724174801 1044.55526993586 27.721 2 0.13699682830493076 0.001197003629623909 0.9438714419765777 ['CON__P00761'] 130455 15938 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 69.231 2 0.13699624665529078 0.001197003629623909 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 11917 12463 DHSGQVTIL True PC9_epitope_Rep2 968.49270953176 968.49160993586 53.25 2 0.13699406488858315 0.001197003629623909 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 47567 21197 IYM[Oxidation]DTLNIF True PC9_epitope_Rep4 1144.547447907 1144.54634993586 89.699 2 0.13699010852921906 0.001197003629623909 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 42596 5806 IESSSPEV True H1975_Epitope_Rep3 846.39707781142 846.3965249679301 27.355 1 0.13698961851584 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2'] 9378 21847 AVVEFLTSV True PC9_epitope_Rep3 963.5276980581499 963.52660993586 89.337 2 0.1369882546377017 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA'] 73608 21639 NGFPVFATV True PC9_epitope_Rep2 950.48616759934 950.48506993586 88.709 2 0.13698808704496834 0.001197003629623909 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 27603 9555 FPSIVGRP True H1975_Epitope_Rep3 871.49158733295 871.49048993586 41.761 2 0.13698115207936803 0.001197003629623909 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 11943 14583 DHSPDSLPL True PC9_epitope_Rep5 979.46107505031 979.45996993586 61.095 2 0.13698025643374323 0.001197003629623909 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 6837 20325 AQIDQYVGL True PC9_epitope_Rep1 1005.5131106231698 1005.51200993586 83.009 2 0.1369672045227039 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000125744|O75298-2|RTN2', 'ENSG00000125744|ENST00000245923|RTN2', 'ENST00000591789.1_1_19:45989311-45991830:-|nuORF', 'ENST00000593187.5_1_19:45988968-45991824:-|nuORF', 'ENST00000593129.1_1_19:45988968-45992276:-|nuORF', 'nc|ENSG00000125744|O75298-3|RTN2'] 132057 11729 VYIHPSSALF True NCI_RA007_Epitope_Rep3 1132.59169529704 1132.5905899358602 53.247 2 0.13696532763029023 0.001197003629623909 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8'] 96408 7251 SEIDMSVKA True H1975_Epitope_Rep1 978.46919720586 978.46808993586 32.901 2 0.13696110530019528 0.001197003629623909 0.9438714419765777 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 4819 2629 ALEQQVEEM[Oxidation]K True PC9_epitope_Rep2 1219.5754535599897 1219.57434993586 14.762 2 0.13695562050455912 0.001197003629623909 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 38010 7276 HEIEGTGLP True H1975_Epitope_Rep3 951.4661604307499 951.46506993586 32.962 2 0.13695510612541253 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'NIBAN2|p.M44I|1|0.79|ENSG00000136830|chr9:127531702-127531702|C/T|missense_variant'] 14105 13902 DSDSVPAFY True H1975_Epitope_Rep3 999.4185415319898 999.41744993586 58.786 2 0.13694838897980327 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 68355 9851 LTSKPILL True H1975_Epitope_Rep2 883.5742543277499 883.57314993586 42.878 2 0.13694196114424942 0.001197003629623909 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 37292 17357 GVVPQLVKL True PC9_epitope_Rep6 951.6117024656298 951.61060993586 79.379 2 0.13694065576952819 0.001197003629623909 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 76099 10984 NRNELAETL True PC9_epitope_Rep5 1058.5356369729 1058.53452993586 47.239 2 0.1369400754033176 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'RSF1|p.K386Nfs*6|1|0.19|ENSG00000048649|chr11:77702071-77702071|T/-|frameshift_variant'] 7753 11273 ASVAWAVLK True NCI_RA007_Epitope_Rep5 943.5491022090699 943.54800993586 50.006 2 0.13693108304844118 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3', 'ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B'] 19359 7395 ELNITAAK True PC9_epitope_Rep1 858.4810822188999 858.47998993586 33.258 2 0.1369282823181982 0.001197003629623909 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 123405 8867 VIDPVAPRY True H1975_Epitope_Rep2 1028.5654805492 1028.5643899358602 39.076 2 0.1369198494216439 0.001197003629623909 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 132402 16935 VYNENLVHMI True PC9_epitope_Rep6 1230.60669373818 1230.60558993586 77.684 2 0.1369193839932453 0.001197003629623909 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 68898 15972 LVEQVIPI True H1975_Epitope_Rep1 909.5535188831699 909.55297496793 66.759 1 0.1369107899663879 0.001197003629623909 0.9438714419765777 ['ENSG00000076513|ENST00000261739|ANKRD13A', 'ANKRD13A|p.A557Hfs*21|1|0.16|ENSG00000076513|chr12:110037449-110037450|AG/-|frameshift_variant'] 112670 4760 TPFQGQGHGA True PC9_epitope_Rep5 998.4569927293797 998.45588993586 23.357 2 0.13690651814446728 0.001197003629623909 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 83244 15437 QADLINELY True H1975_Epitope_Rep1 1077.53423999057 1077.53367496793 64.648 1 0.13690647420202148 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 29816 18615 FVVDEVHLI True PC9_epitope_Rep6 1069.5807962601698 1069.5796899358602 84.245 2 0.13690156852719576 0.001197003629623909 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 22298 10690 ETEDVNLAY True H1975_Epitope_Rep2 1052.4662200004 1052.46567496793 46.143 1 0.13689822566111481 0.001197003629623909 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000153767|ENST00000283875|GTF2E1'] 10051 19767 AYVGDLQTL True PC9_epitope_Rep5 978.5022115863 978.5016649679301 81.077 1 0.13689769632625068 0.001197003629623909 0.9438714419765777 ['ENSG00000065802|ENST00000264607|ASB1'] 11811 18441 DHLLSVSL True PC9_epitope_Rep4 882.4810822189 882.47998993586 79.004 2 0.1368932814519528 0.001197003629623909 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 112200 16738 TLVYHVVGV True PC9_epitope_Rep3 985.5596668927699 985.55856993586 69.521 2 0.136890137579475 0.001197003629623909 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 53600 19542 KVVNIVPVI True PC9_epitope_Rep3 979.6430025939098 979.64190993586 80.401 2 0.13688958711005225 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 96966 10316 SEVFESVSA True H1975_Epitope_Rep2 953.43419159613 953.43364496793 44.688 1 0.13688878788484887 0.001197003629623909 0.9438714419765777 ['ENSG00000155850|ENST00000286298|SLC26A2'] 1947 12244 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47456993586 52.178 2 0.13688267027336046 0.001197003629623909 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 76066 15777 NRLTEMETL True PC9_epitope_Rep1 1105.5437591284501 1105.5426699358602 65.505 2 0.13687632018524462 0.001197003629623909 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 90155 17621 RHDDYLVML True PC9_epitope_Rep2 1160.5648289262 1160.56372993586 73.058 2 0.13687184126867316 0.001197003629623909 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 97697 13671 SHDVVVMTV True PC9_epitope_Rep5 985.49026700361 985.48916993586 57.61 2 0.13686942573369354 0.001197003629623909 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6'] 23825 19231 EYLLKVNEI True PC9_epitope_Rep1 1119.61757569171 1119.61646993586 78.772 2 0.1368686866398853 0.001197003629623909 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 1884 5037 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5965849037902 24.457 3 0.13686393124910293 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 72693 13429 MYLKTVDKF True PC9_epitope_Rep1 1143.5998174525898 1143.59818490379 56.516 3 0.13686226926527578 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 87519 12718 QTHSVFVNV True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 53.792 2 0.13686088751027345 0.001197003629623909 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 37040 18063 GVSDVDYSL True PC9_epitope_Rep1 953.43419159613 953.43364496793 74.272 1 0.13685913222451535 0.001197003629623909 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 97134 10399 SFETTEESLR True PC9_epitope_Rep2 1197.55134660669 1197.5502499358602 45.322 2 0.13685772886413225 0.001197003629623909 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 71012 6087 [Acetylation]-M[Oxidation]EQVNELKEK True H1975_Epitope_Rep3 1304.6282177251398 1304.62710993586 28.427 2 0.13685465123604007 0.001197003629623909 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'ENST00000540736.1_1_11:63953733-63960840:+|nuORF'] 102648 16402 SQDFPGSNL True PC9_epitope_Rep5 963.42977492203 963.42866993586 68.089 2 0.13685156712984942 0.001197003629623909 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 67570 7966 LTEQYNEQY True H1975_Epitope_Rep3 1186.51423282198 1186.5131299358602 35.613 2 0.13685066310147195 0.001197003629623909 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 104087 16588 SRVDLSNVL True PC9_epitope_Rep2 1001.5505587610501 1001.54946993586 69.044 2 0.136826431124617 0.001197003629623909 0.9438714419765777 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000196873|Q5JTY5-2|ZNG1C', 'ENST00000382436.3_9:42674366-42714533:+|nuORF', 'ENST00000456188.5_1_2:114214762-114253317:+|nuORF'] 83743 6145 QEDDRQLIA True H1975_Epitope_Rep2 1086.53055159246 1086.5294499358602 28.609 2 0.13682338985734255 0.001197003629623909 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 77628 14217 NYVQAVEEF True NCI_RA007_Epitope_Rep5 1097.5029398622898 1097.50184993586 61.377 2 0.13682260641423408 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 92103 12234 RPYEPINSI True PC9_epitope_Rep2 1087.56620882519 1087.5651099358602 52.369 2 0.13682223549793598 0.001197003629623909 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2', 'GTF3C2|p.A731Cfs*26|1|0.4|ENSG00000115207|chr2:27328533-27328534|-/A|frameshift_variant'] 53226 12851 KTDVTMLLY True H1975_Epitope_Rep2 1082.56818297114 1082.5670899358602 54.541 2 0.13681915088153795 0.001197003629623909 0.9438714419765777 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL', 'ENST00000514335.1_1_5:37051847-37064632:+|nuORF'] 89385 8165 REMGQFYEA True H1975_Epitope_Rep2 1129.4862442523297 1129.4851499358601 36.357 2 0.13681236980096853 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.T809Rfs*37|1|0.17|ENSG00000106608|chr7:43877038-43877038|T/-|frameshift_variant'] 6105 9600 APM[Oxidation]PPIIHA True PC9_epitope_Rep6 961.50552352537 961.50442993586 47.243 2 0.1368120428437586 0.001197003629623909 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 7846 6681 ATAIGMPVEK True NCI_RA007_Epitope_Rep3 1015.5372171960299 1015.5361099358599 33.362 2 0.13679571527591272 0.001197003629623909 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 49115 6240 KGDVDVSLPK True NCI_RA007_Epitope_Rep2 1056.5815245361598 1056.5804299358601 28.88 2 0.13678998901486009 0.001197003629623909 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant'] 115755 22372 TVLQELINV True PC9_epitope_Rep2 1027.5913609438699 1027.59026993586 91.546 2 0.1367888974742934 0.001197003629623909 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 51973 7356 KKYKNIVLL True NCI_RA007_Epitope_Rep4 1117.7223155437698 1117.72120993586 34.935 2 0.13678849041584334 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16'] 104923 5354 STFSTNYR True NCI_RA007_Epitope_Rep5 974.4457593393399 974.44466993586 27.285 2 0.13678464777440003 0.001197003629623909 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 8459 8827 ATSVITIVK True NCI_RA007_Epitope_Rep2 930.57498260374 930.57388993586 38.984 2 0.1367839888873894 0.001197003629623909 0.9438714419765777 ['ENSG00000197063|ENST00000357736|MAFG'] 44879 9203 IQDDAVHTL True PC9_epitope_Rep2 1010.50327421546 1010.50216993586 40.74 2 0.13677637055396502 0.001197003629623909 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 54166 19446 KYNMVSYLL True PC9_epitope_Rep4 1129.58416738845 1129.58306993586 82.913 2 0.13677397968134647 0.001197003629623909 0.9438714419765777 ['ENSG00000138678|ENST00000264409|GPAT3'] 40178 11656 HRFPTVAV True PC9_epitope_Rep1 925.5133854066898 925.5122899358599 49.712 2 0.13676993700491544 0.001197003629623909 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 37745 12161 HAVGDIPGV True PC9_epitope_Rep3 863.45011644379 863.44900993586 51.814 2 0.13676707586575598 0.001197003629623909 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 60368 19837 LIIDEIHLL True PC9_epitope_Rep6 1077.64339651673 1077.6422899358602 88.964 2 0.1367667305147933 0.001197003629623909 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3'] 17177 12068 EHAFAVQQL True PC9_epitope_Rep6 1041.5243440132099 1041.5232499358601 57.736 2 0.1367625567547961 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 7267 10962 ARPPGYEF True PC9_epitope_Rep1 935.45011644379 935.44900993586 47.053 2 0.136756663800662 0.001197003629623909 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 97991 17812 SHSFVVNIL True PC9_epitope_Rep6 1014.5498304850599 1014.54872993586 81.146 2 0.1367565188467192 0.001197003629623909 0.9438714419765777 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 30125 11858 FYQEHPDL True PC9_epitope_Rep5 1047.4661604307498 1047.4650699358601 50.61 2 0.13675462656352483 0.001197003629623909 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 67508 16227 LTELPDWSY True H1975_Epitope_Rep2 1122.5233409537 1122.52277496793 67.627 1 0.13675370289937464 0.001197003629623909 0.9438714419765777 ['chr14:22830254-22830419|153|13.38|0.79|4.08|+|2|MRPL52,None|1', 'ENST00000557543.5_1_14:23299153-23299471:+|nuORF', 'ENST00000311892.10_1_14:23299153-23300177:+|nuORF', 'ENST00000553482.5_1_14:23299112-23299471:+|nuORF', 'nc|ENSG00000172590|Q86TS9-4|MRPL52', 'ENSG00000172590|ENST00000397496|MRPL52', 'nc|ENSG00000172590|Q86TS9|MRPL52'] 57444 9018 LEIPPPKPP True H1975_Epitope_Rep1 986.5800679841799 986.57896993586 39.594 2 0.13674984904661439 0.001197003629623909 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 28059 16890 FRDGLKLML True PC9_epitope_Rep4 1091.61613622307 1091.61502993586 72.951 2 0.1367466530911237 0.001197003629623909 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ACTN4-CATSPERG|1|fusion'] 11653 15054 DHDGNIVEL True PC9_epitope_Rep3 1010.46688870674 1010.46578993586 63.035 2 0.13674094309366533 0.001197003629623909 0.9438714419765777 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 21404 21311 ERNDLIVFL True PC9_epitope_Rep2 1117.6131590176099 1117.61206993586 87.436 2 0.13673085141014146 0.001197003629623909 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1'] 8660 21672 AVATDFFTV True PC9_epitope_Rep2 969.48074786573 969.47964993586 88.838 2 0.13672425554552872 0.001197003629623909 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 120294 14635 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 68.21 2 0.13672412500371967 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 5311 10201 ALSGHLETV True PC9_epitope_Rep3 925.48689587533 925.48578993586 44.189 2 0.1367201984736911 0.001197003629623909 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 26140 11677 FHLSSQSSL True PC9_epitope_Rep2 1004.49270953176 1004.49160993586 50.247 2 0.1367193215365675 0.001197003629623909 0.9438714419765777 ['SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion', 'nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 96667 10467 SENPSVYVP True NCI_RA007_Epitope_Rep4 990.4658260775799 990.46472993586 47.111 2 0.1367129906706467 0.001197003629623909 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 43257 21295 IHDGFGFML True PC9_epitope_Rep5 1035.48478770035 1035.4836899358602 86.963 2 0.13671220041325077 0.001197003629623909 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 43604 17382 IIIFVPVPQLK True NCI_RA007_Epitope_Rep2 1265.81113054817 1265.81002993586 72.355 2 0.1367040556988571 0.001197003629623909 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 73765 16226 NHASLISAL True PC9_epitope_Rep3 924.50288029264 924.50178993586 67.551 2 0.13669928894970407 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 25253 18356 FEDENFILK True PC9_epitope_Rep3 1153.5655401188499 1153.56444993586 75.818 2 0.13669556043076894 0.0012335209313083031 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 95054 9045 RYSEYAEEF True NCI_RA007_Epitope_Rep4 1192.5036681382796 1192.50256993586 41.623 2 0.13669442134008247 0.0012335209313083031 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 24364 19587 FAEGFVRAL True PC9_epitope_Rep3 1008.5392658013598 1008.53816993586 80.578 2 0.13669385906880235 0.0012335209313083031 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 96225 4979 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 24.235 2 0.13669268199546808 0.0012335209313083031 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 89229 7132 REIVAISSA True H1975_Epitope_Rep2 944.5290950404799 944.52798993586 32.366 2 0.13668811950803683 0.0012335209313083031 0.9438714419765777 ['ENSG00000169019|ENST00000381571|COMMD8'] 336 18985 AAIPIQINV True PC9_epitope_Rep6 937.55966689277 937.55856993586 85.669 2 0.1366866683677565 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 41240 7071 IAEKETLEY True H1975_Epitope_Rep1 1094.54955570154 1094.5484499358602 32.225 2 0.13668128741032082 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14', 'nc|ENSG00000185842|Q0VDD8-2|DNAH14', 'ENST00000498360.5_1_1:225142255-225148920:+|nuORF', 'nc|ENSG00000185842|Q0VDD8-3|DNAH14'] 136180 18288 YGIPAIVKL True PC9_epitope_Rep6 972.60080342876 972.59970993586 82.988 2 0.13668056980410473 0.0012335209313083031 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 117851 14318 VAPEEHPVLL True PC9_epitope_Rep5 1102.60225998074 1102.60116993586 60.076 2 0.13667831973405353 0.0012335209313083031 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 56874 12121 LEDLPTVEA True H1975_Epitope_Rep2 985.49679185269 985.49624496793 51.707 1 0.13667688977773987 0.0012335209313083031 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 28109 19854 FREELMEAL True PC9_epitope_Rep5 1136.5535955361597 1136.5524899358602 81.418 2 0.1366714192706758 0.0012335209313083031 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 116435 15454 TWTEVSYTF True NCI_RA007_Epitope_Rep3 1132.5076908895599 1132.5065899358601 68.343 2 0.13666840211346049 0.0012335209313083031 0.9438714419765777 ['ENSG00000116663|ENST00000376753|FBXO6'] 48611 8444 KEIEYVETV True H1975_Epitope_Rep3 1108.5652057656798 1108.5641099358602 37.464 2 0.1366630618463094 0.0012335209313083031 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 9343 8468 AVTEAEIQQLK True NCI_RA007_Epitope_Rep5 1228.66631678928 1228.66520993586 39.254 2 0.13666212964276322 0.0012335209313083031 0.9438714419765777 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 96503 9240 SELEGTPEV True H1975_Epitope_Rep2 959.4447562798299 959.4442049679301 40.498 1 0.1366578826462222 0.0012335209313083031 0.9438714419765777 ['ENSG00000124787|ENST00000380051|RPP40', 'nc|ENSG00000124787|O75818-2|RPP40'] 120313 15865 VFPEKGYSF True PC9_epitope_Rep2 1072.5229470308798 1072.52184993586 66.282 2 0.13665108158357067 0.0012335209313083031 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 1879 9495 AEIISEIRA True H1975_Epitope_Rep1 1000.55530978832 1000.55420993586 41.443 2 0.13665054898529766 0.0012335209313083031 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 7400 4980 ASAIPAYSK True NCI_RA007_Epitope_Rep5 906.4810822189 906.47998993586 25.858 2 0.1366451301383411 0.0012335209313083031 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1'] 136713 16762 YIITGGGFL True H1975_Epitope_Rep1 939.5065686907499 939.5060249679301 69.875 1 0.13664227465183992 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 14549 12531 DVDPETLSY True H1975_Epitope_Rep2 1037.45532096353 1037.4542299358602 53.294 2 0.13663576509337763 0.0012335209313083031 0.9438714419765777 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 115016 7047 TTLTSQYIK True NCI_RA007_Epitope_Rep3 1053.57062549929 1053.5695299358601 34.837 2 0.13662634738935603 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 83761 10407 QEEANIYAV True H1975_Epitope_Rep2 1035.4872897981497 1035.48618993586 45.044 2 0.13662305279922726 0.0012335209313083031 0.9438714419765777 ['ENST00000478678.5_1_6:32154995-32157692:-|nuORF', 'ENSG00000204304|ENST00000375050|PBX2'] 23950 12167 EYNSDLHQF True PC9_epitope_Rep5 1151.4883524273098 1151.48724993586 51.79 2 0.13662285396182014 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 93802 16863 RVADDVFTL True PC9_epitope_Rep6 1034.53965972418 1034.53856993586 77.382 2 0.13661787793113747 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 89137 6963 REFSGYVES True NCI_RA007_Epitope_Rep4 1072.4825387708797 1072.4814499358602 33.409 2 0.1366070558290519 0.0012335209313083031 0.9438714419765777 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 36048 9683 GVDVTGPHLY True H1975_Epitope_Rep1 1056.52400966004 1056.52290993586 42.17 2 0.13659878100423833 0.0012335209313083031 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 102031 6272 SPPPPPPPP True H1975_Epitope_Rep2 881.4647038787699 881.46360993586 29.07 2 0.13659761210000568 0.0012335209313083031 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 138786 16796 YSDEFGNLDF True H1975_Epitope_Rep1 1205.4876837209702 1205.4865899358601 70.01 2 0.13659525626218477 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 57370 8221 LEHGIVPVT True H1975_Epitope_Rep3 963.5389314481899 963.53782993586 36.605 2 0.13659451465745095 0.0012335209313083031 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 88866 4866 REAEFTKSIA True NCI_RA007_Epitope_Rep5 1150.59823722946 1150.5971499358602 25.41 2 0.13658260145485293 0.0012335209313083031 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 35269 4571 GSMGSFSEK True NCI_RA007_Epitope_Rep5 928.3960322656001 928.39492993586 24.242 2 0.13657789813596113 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 96157 5127 SEEEGVPST True H1975_Epitope_Rep3 933.39272070697 933.39217496793 24.832 1 0.136577497732284 0.0012335209313083031 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 47485 17823 IYKIDFVRF True PC9_epitope_Rep6 1199.6702799709099 1199.66863490379 81.188 3 0.1365772026201508 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000109103|Q13432-2|UNC119', 'ENSG00000109103|ENST00000335765|UNC119'] 54606 11938 LADELINAA True H1975_Epitope_Rep2 928.48656152216 928.48601496793 50.997 1 0.13657469218648166 0.0012335209313083031 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000599232.1_1_19:58905872-58905992:+|nuORF'] 135264 11547 YAYEPADTAL True NCI_RA007_Epitope_Rep4 1112.5026055091198 1112.5015099358602 51.362 2 0.1365641134586656 0.0012335209313083031 0.9438714419765777 ['ENSG00000106541|ENST00000419304|AGR2'] 27188 17563 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55805496793 72.865 1 0.13655831457111295 0.0012335209313083031 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 120303 16042 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 66.52 2 0.13655692060266847 0.0012335209313083031 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 32598 10211 GHDASQITL True PC9_epitope_Rep3 940.46140940348 940.46030993586 44.228 2 0.13655522710943724 0.0012335209313083031 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 76105 16824 NRPEFITEF True PC9_epitope_Rep6 1151.56112344475 1151.56002993586 77.222 2 0.1365519806048176 0.0012335209313083031 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 24122 5892 EYSKQMQRF True PC9_epitope_Rep2 1215.57064258263 1215.56954993586 28.056 2 0.1365454765971813 0.0012335209313083031 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 110112 9831 TIAPALVSK True PC9_epitope_Rep3 898.5487678559 898.54766993586 42.774 2 0.1365401831282335 0.0012335209313083031 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 113871 17377 TRFAEVECL True PC9_epitope_Rep5 1066.5117307241799 1066.5106299358602 71.841 2 0.13653458115693806 0.0012335209313083031 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 35803 21235 GTYDIFYTA True PC9_epitope_Rep3 1049.47057710485 1049.47007496793 86.972 1 0.1365323031076864 0.0012335209313083031 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 37536 21392 GYMEGYYTF True PC9_epitope_Rep1 1129.44264810485 1129.4415499358602 87.118 2 0.1365278670170467 0.0012625779546237136 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 6219 4330 APRGDGVQVSA True PC9_epitope_Rep4 1055.5359713260698 1055.5348699358601 23.082 2 0.13652681427460256 0.0012625779546237136 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 38252 14356 HEYPWILSA True NCI_RA007_Epitope_Rep5 1114.54474510462 1114.54364993586 61.905 2 0.13652440450228873 0.0012625779546237136 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 72876 9508 NASEHIVYL True H1975_Epitope_Rep3 1044.5240096600398 1044.52290993586 41.577 2 0.13651274503951272 0.0012625779546237136 0.9438714419765777 ['ENSG00000117000|ENST00000372771|RLF'] 11680 20240 DHDRFWVL True PC9_epitope_Rep3 1086.52467836638 1086.5235899358602 83.113 2 0.13651153778598665 0.0012625779546237136 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 64606 12358 LREGDPVSL True PC9_epitope_Rep5 984.52400966004 984.52290993586 52.53 2 0.13650951766211422 0.0012625779546237136 0.9438714419765777 ['ENSG00000141499|ENST00000396463|WRAP53'] 42841 23222 IFLSQPILL True PC9_epitope_Rep1 1042.64266824074 1042.6415699358602 94.122 2 0.13650553845827607 0.0012625779546237136 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 132476 6630 VYPDGIRHI True NCI_RA007_Epitope_Rep5 1068.5716285587998 1068.5705299358601 32.167 2 0.1365038372470262 0.0012625779546237136 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 4100 9183 AHSPLAAQL True PC9_epitope_Rep6 906.4923156089401 906.49120993586 45.452 2 0.136502386208038 0.0012625779546237136 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 57277 9413 LEGENIVSA True H1975_Epitope_Rep2 930.4658260775799 930.46472993586 41.174 2 0.13649940417986353 0.0012625779546237136 0.9438714419765777 ['ENST00000467586.5_1_17:74084367-74085867:-|nuORF', 'nc|ENSG00000182473|Q9UPT5-2|EXOC7', 'nc|ENSG00000182473|Q9UPT5-5|EXOC7', 'ENSG00000182473|ENST00000589210|EXOC7', 'nc|ENSG00000182473|Q9UPT5-6|EXOC7', 'nc|ENSG00000182473|Q9UPT5|EXOC7'] 103795 15137 SRGDFVVEY True PC9_epitope_Rep1 1070.50327421546 1070.5021699358601 63.047 2 0.13649587749097963 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 136395 8199 YHEGSAPAL True PC9_epitope_Rep1 943.4399456829099 943.43884993586 36.371 2 0.13649341337629126 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000558338.1_1_15:62199375-62209725:-|nuORF'] 132483 7868 VYPDGIRHI True PC9_epitope_Rep6 1068.5716285587998 1068.5705299358601 39.673 2 0.13649216424098062 0.0012625779546237136 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 21488 4326 ERQPGAASL True PC9_epitope_Rep6 927.4773938207899 927.47628993586 23.699 2 0.1364896488397506 0.0012625779546237136 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 139397 8770 YTEEDAVSY True H1975_Epitope_Rep1 1075.43458551895 1075.43407496793 38.664 1 0.13648031281375267 0.0012625779546237136 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 73325 8508 NELGAAAVAA True H1975_Epitope_Rep2 885.4555957470499 885.45504496793 37.681 1 0.1364795422367987 0.0012625779546237136 0.9438714419765777 ['ENST00000216500.9_1_14:60631944-60632160:-|nuORF'] 130622 16457 VVAGRFIEV True PC9_epitope_Rep3 988.5705659296399 988.56946993586 68.44 2 0.13647798502770622 0.0012625779546237136 0.9438714419765777 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 89580 4825 RESGLKYVA True NCI_RA007_Epitope_Rep4 1021.5556441414899 1021.55454993586 24.994 2 0.13647378905954854 0.0012625779546237136 0.9438714419765777 ['FAM98C-BLVRB|1|fusion', 'ENSG00000090013|ENST00000263368|BLVRB'] 98001 14081 SHSPPLLQV True PC9_epitope_Rep5 976.53418042092 976.53308993586 59.177 2 0.13646306388647225 0.0012625779546237136 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 69040 19307 LVIDAVREI True PC9_epitope_Rep3 1026.6073453611798 1026.6062499358602 79.487 2 0.13645782411296617 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 28779 13984 FTDEEVDELY True H1975_Epitope_Rep2 1258.52412879934 1258.5230299358602 58.937 2 0.13645748939949848 0.0012625779546237136 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 89104 4864 REFDRRFSP True NCI_RA007_Epitope_Rep3 1208.6050539453997 1208.60341490379 26.117 3 0.13645609862131264 0.0012625779546237136 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 72521 21761 M[Oxidation]VDGTLLLL True PC9_epitope_Rep4 989.5467196310099 989.54562993586 91.898 2 0.1364458628309744 0.0012625779546237136 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 102695 16612 SQDPTMIGV True PC9_epitope_Rep1 946.44298245802 946.44188993586 68.724 2 0.13644140771329955 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 127016 6551 VPYGVGKAA True PC9_epitope_Rep1 860.4756029156398 860.4745099358599 30.003 2 0.13642712912303642 0.0012625779546237136 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 140564 19296 YYLNEIQSF True PC9_epitope_Rep6 1175.5498900547097 1175.54937496793 86.869 1 0.13642568430074364 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 117008 16377 TYQDIQNTI True PC9_epitope_Rep1 1094.52440358286 1094.52387496793 67.816 1 0.13642531643770586 0.0012625779546237136 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 140342 19081 YYEHEFVEL True PC9_epitope_Rep5 1227.5448046742697 1227.54370993586 78.425 2 0.13642448750119568 0.0012625779546237136 0.9438714419765777 ['ATP9B|p.T1064Rfs*5|1|0.1|ENSG00000166377|chr18:79374017-79374017|A/-|frameshift_variant', 'nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 17410 7219 EHFPNHQQL True PC9_epitope_Rep3 1148.53630567924 1148.53465490379 32.779 3 0.13642405699994745 0.0012625779546237136 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 102802 22492 SQFLGYPITL True PC9_epitope_Rep1 1137.60701100801 1137.6059099358602 91.315 2 0.13642346790022897 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 8042 10343 ATDWGDTQAY True H1975_Epitope_Rep1 1126.4567179458597 1126.4561749679299 44.733 1 0.13641718108965664 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000149761|Q9BRQ3-2|NUDT22', 'ENST00000537707.1_1_11:63993896-63994784:+|nuORF', 'ENST00000422364.2_1_11:63994043-63994784:+|nuORF', 'nc|ENSG00000149761|Q9BRQ3-3|NUDT22', 'ENSG00000149761|ENST00000279206|NUDT22'] 88842 4557 RDYVAPTA True NCI_RA007_Epitope_Rep5 891.4450310633499 891.44392993586 24.187 2 0.1364163560386576 0.0012625779546237136 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 97874 16718 SHLDYDITL True PC9_epitope_Rep6 1075.5185899264302 1075.51748993586 76.781 2 0.13641384047973884 0.0012625779546237136 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 11612 15009 DHARLQLQL True PC9_epitope_Rep3 1092.60399131624 1092.60288993586 62.858 2 0.13641367897119638 0.0012625779546237136 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 107184 21261 SYNPLWLRI True PC9_epitope_Rep5 1160.6342288153598 1160.63312993586 86.831 2 0.13641364208173593 0.0012625779546237136 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 47555 19164 IYMDTLNIF True NCI_RA007_Epitope_Rep4 1128.5525329069999 1128.5514299358601 82.862 2 0.1364078896615481 0.0012625779546237136 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 7177 20128 ARDEIIWLL True PC9_epitope_Rep6 1127.63389446219 1127.63278993586 90.095 2 0.13640336925263158 0.0012625779546237136 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 96410 7298 SEIDMSVKA True H1975_Epitope_Rep2 978.46919720586 978.46808993586 33.009 2 0.13640257560559396 0.0012625779546237136 0.9438714419765777 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 105752 19241 SVIDHIHLI True PC9_epitope_Rep3 1045.59202965021 1045.59092993586 79.231 2 0.13640020230416824 0.0012625779546237136 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1'] 123360 18444 VIAEILRGV True PC9_epitope_Rep4 968.6018660579199 968.60076993586 79.015 2 0.13639321336910695 0.0012625779546237136 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 30266 7390 GAAKDLPGV True PC9_epitope_Rep4 826.4548674710599 826.45376993586 35.77 2 0.13638596274919274 0.0012625779546237136 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 132855 20487 VYTPVDSLVF True PC9_epitope_Rep6 1138.5910265906998 1138.58992993586 91.525 2 0.13638564636827422 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'KDM2B|p.I399Mfs*82|1|0.34|ENSG00000089094|chr12:121510014-121510017|GTCT/-|frameshift_variant', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 28918 20486 FTEGELMSV True PC9_epitope_Rep1 1011.4582981689899 1011.45720993586 83.613 2 0.13637580511476977 0.0012625779546237136 0.9438714419765777 ['STK11|p.P281Rfs*6|1|0.82|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENSG00000118046|ENST00000326873|STK11', 'STK11|p.M51Ifs*112|1|0.39|ENSG00000118046|chr19:1207065-1207066|-/C|frameshift_variant'] 20564 19342 EQDQSVLVL True PC9_epitope_Rep4 1029.5342399905699 1029.5331499358601 82.509 2 0.13637092328549988 0.0012625779546237136 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 132709 19696 VYSEVAAYEF True PC9_epitope_Rep4 1176.5339056373998 1176.5333749679298 83.882 1 0.13636948958112044 0.0012625779546237136 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 31885 5706 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 26.978 2 0.1363599120024657 0.0012625779546237136 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 75566 10954 NQMPTQPQV True PC9_epitope_Rep2 1041.49132963277 1041.49022993586 47.454 2 0.13635129489367298 0.0012625779546237136 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 72537 10415 M[Oxidation]VDPLLTKY True H1975_Epitope_Rep2 1094.56818335158 1094.5670899358602 45.075 2 0.13635088620347066 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 97726 20056 SHFEGLITTI True PC9_epitope_Rep5 1116.58152453616 1116.5804299358601 82.199 2 0.13634979766280986 0.0012625779546237136 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 103680 12903 SRDPVQLNL True PC9_epitope_Rep6 1040.56145779792 1040.56036993586 61.164 2 0.13634665448699168 0.0012625779546237136 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 44119 16570 ILNLPTFS True H1975_Epitope_Rep3 903.5065686907501 903.5060249679301 69.234 1 0.13634589267104444 0.0012625779546237136 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 117155 11318 TYSPALNKM[Oxidation]F True PC9_epitope_Rep6 1186.5692459807399 1186.5681499358602 54.555 2 0.13634484402785813 0.0012625779546237136 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 132558 13784 VYPLMKEYF True NCI_RA007_Epitope_Rep3 1188.5889184157197 1188.58782993586 61.549 2 0.13633989732153418 0.0012625779546237136 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 109942 7024 THSDIQVKL True PC9_epitope_Rep6 1039.56620882519 1039.5651099358602 36.017 2 0.13633370678321513 0.0012625779546237136 0.9438714419765777 ['ENSG00000105223|ENST00000409735|PLD3', 'EGLN2-PLD3|1|fusion'] 66591 6647 LSSPATLNSR True PC9_epitope_Rep2 1044.5563724174801 1044.55526993586 30.976 2 0.13633304904210902 0.0012625779546237136 0.9438714419765777 ['CON__P00761'] 23998 16766 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 69.738 2 0.13633233788949695 0.0012625779546237136 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 123643 17476 VILPKFTAV True PC9_epitope_Rep6 986.6164534929 986.61534993586 79.845 2 0.13632678050690855 0.0012625779546237136 0.9438714419765777 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 29354 22138 FVEETVYLL True PC9_epitope_Rep2 1111.58012755383 1111.57902993586 90.633 2 0.13632460991902823 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 16209 13606 EEFPSFGA True H1975_Epitope_Rep2 882.3759484440199 882.3753949679301 57.474 1 0.13632370054056922 0.0012625779546237136 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 88400 16410 QYPVYWDHLEF True NCI_RA007_Epitope_Rep4 1495.67721582615 1495.67610993586 71.124 2 0.136321449976137 0.0012625779546237136 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21'] 97623 17714 SHALVTLTL True PC9_epitope_Rep4 953.5545815123301 953.55348993586 76.162 2 0.13631717357494583 0.0012625779546237136 0.9438714419765777 ['ENST00000531423.1_1_8:145696018-145698106:+|nuORF', 'ENSG00000167702|ENST00000645548|KIFC2', 'nc|ENSG00000167702|Q96AC6|KIFC2'] 87625 20648 QTVAWFPLYY True H1975_Epitope_Rep2 1286.6335601090198 1286.6324699358602 85.523 2 0.13631670270498206 0.0012625779546237136 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 94410 10920 RYFDPANGKF True PC9_epitope_Rep6 1213.5880068989297 1213.58635490379 52.87 3 0.13631613430220418 0.0012625779546237136 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 215 21082 AAFPGASLYL True PC9_epitope_Rep4 1008.5280324113198 1008.52692993586 89.253 2 0.13631470445775382 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 8508 17079 ATVPGLLKV True PC9_epitope_Rep3 896.5695033004799 896.56840993586 70.846 2 0.1363053717380357 0.0012625779546237136 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 30728 15965 GANAILGVSL True H1975_Epitope_Rep3 913.5232813840499 913.5227349679301 66.865 1 0.13630120957330033 0.0012625779546237136 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 103057 18177 SQLEDAIRL True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 75.123 2 0.1362957896320087 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 124350 19740 VLDSEGYLLFY True H1975_Epitope_Rep3 1317.6492697428098 1317.64816993586 82.662 2 0.13628875150330197 0.0012625779546237136 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 34615 20544 GQIDLLERL True PC9_epitope_Rep1 1055.59750895347 1055.59640993586 83.834 2 0.1362851197904535 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 9674 21600 AYGSLFNTI True PC9_epitope_Rep1 984.4916469026 984.49109496793 87.908 1 0.1362834448764304 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 31987 7255 GETGYVPPA True H1975_Epitope_Rep3 889.4181476091699 889.4175949679301 32.879 1 0.13627900882684668 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 2801 4875 AEVEHVVNA True H1975_Epitope_Rep3 966.4770594676199 966.47596993586 23.877 2 0.13627555872203082 0.0012625779546237136 0.9438714419765777 ['ENST00000577286.5_1_17:79993838-79994415:-|nuORF', 'ENST00000579842.5_1_17:79993838-79994531:-|nuORF', 'ENSG00000169738|ENST00000306869|DCXR'] 83887 13183 QEIEHVFLV True H1975_Epitope_Rep2 1112.5866099165999 1112.58550993586 55.833 2 0.13627532275746682 0.0012625779546237136 0.9438714419765777 ['STK32C|p.D191Tfs*3|1|0.11|ENSG00000165752|chr10:132226868-132226868|C/-|frameshift_variant', 'nc|ENSG00000165752|Q86UX6-2|STK32C', 'ENSG00000165752|ENST00000298630|STK32C'] 75810 12498 NRDDSNLYI True PC9_epitope_Rep5 1108.51490152832 1108.51380993586 53.072 2 0.1362699598075239 0.0012625779546237136 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 61282 10053 LLDTHRGLLY True H1975_Epitope_Rep2 1199.6662572196299 1199.6646149037902 43.66 3 0.13626791532268162 0.0012625779546237136 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 116488 9765 TYDKGYQF True PC9_epitope_Rep4 1020.45526139388 1020.45416993586 45.202 2 0.1362674877309646 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 87614 6480 QTVAVGVIK True NCI_RA007_Epitope_Rep5 913.5596668927699 913.55856993586 31.592 2 0.1362635119710776 0.0012625779546237136 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 102211 7829 SPSPPFGHSA True PC9_epitope_Rep3 982.4508447197801 982.44974993586 35.103 2 0.13626067885037738 0.0012625779546237136 0.9438714419765777 ['ENSG00000141232|ENST00000499247|TOB1'] 17434 13559 EHFPQAYSV True PC9_epitope_Rep5 1076.49270953176 1076.4916099358602 57.177 2 0.13625660702090048 0.0012625779546237136 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 10027 16176 AYTPFHAVL True PC9_epitope_Rep6 1017.5283667644899 1017.52726993586 74.577 2 0.13625253389912736 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 16286 5625 EEILAQAK True NCI_RA007_Epitope_Rep2 900.4916469026 900.49054993586 26.494 2 0.13625118084064142 0.0012625779546237136 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 13899 17161 DRDPNSLLI True PC9_epitope_Rep1 1041.54547338061 1041.54436993586 70.831 2 0.13624798166225044 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'nc|ENSG00000168477|P22105-2|TNXB', 'ENST00000507684.1_1_6:31976393-31978991:-|nuORF'] 87105 6188 QSEVESTEY True H1975_Epitope_Rep3 1070.44039917538 1070.4393099358601 28.815 2 0.13623772142090865 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 74798 20958 NLNPEFISV True PC9_epitope_Rep5 1031.5287606873098 1031.52817496793 85.675 1 0.13623487686038277 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 62133 15444 LLPDNVHYV True PC9_epitope_Rep5 1068.5603951687601 1068.55928993586 64.414 2 0.13623094911632763 0.0012625779546237136 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 133213 6083 WEDEGVRA True H1975_Epitope_Rep2 960.4301092751998 960.42900993586 28.373 2 0.1362280690617043 0.0012625779546237136 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 89695 3933 REYDGNIRQA True NCI_RA007_Epitope_Rep2 1220.5897978040798 1220.5881449037902 19.934 3 0.13622747289164028 0.0012625779546237136 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'LTBP1-BIRC6|4|fusion', 'LTBP1-BIRC6|5|fusion', 'BIRC6|p.S4724F|2|0.13|ENSG00000115760|chr2:32607555-32607555|C/T|missense_variant', 'LTBP1-BIRC6|2|fusion', 'LTBP1-BIRC6|3|fusion'] 134879 6680 YADEEIPR True NCI_RA007_Epitope_Rep1 991.4610750503099 991.45996993586 29.994 2 0.13622586930442349 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 93528 5403 RSNPYYIVK True NCI_RA007_Epitope_Rep5 1138.61349337078 1138.6118549037901 27.471 3 0.13622297800177607 0.0012625779546237136 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.D681Mfs*9|1|0.2|ENSG00000108055|chr10:110596475-110596475|G/-|frameshift_variant'] 95710 8608 SAYQHPASF True PC9_epitope_Rep5 1006.4508447197799 1006.44974993586 38.054 2 0.1362201903728686 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 17813 12751 EHYYNAISV True PC9_epitope_Rep4 1094.50327421546 1094.5021699358601 56.907 2 0.13620883727277186 0.0012625779546237136 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 38607 10653 HHINDTDTIL True PC9_epitope_Rep5 1177.57275075761 1177.57111490379 45.964 3 0.1362019909211887 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 23627 21050 EYFSYPVSL True PC9_epitope_Rep4 1103.51752729727 1103.51642993586 89.128 2 0.13618961083155662 0.0012625779546237136 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 318 18273 AAIEIFEKV True PC9_epitope_Rep4 1018.5698972232999 1018.56880993586 78.358 2 0.13618754860230609 0.0012625779546237136 0.9438714419765777 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 31455 11459 GEEDFSLSA True H1975_Epitope_Rep3 953.39780608741 953.39725496793 49.196 1 0.13618229886221472 0.0012625779546237136 0.9438714419765777 ['ENSG00000167565|ENST00000322354|SERTAD3'] 64772 13564 LRSDSYVEL True PC9_epitope_Rep2 1080.54513902744 1080.5440499358601 57.465 2 0.13617630945849177 0.0012625779546237136 0.9438714419765777 ['ENST00000463783.1_1_3:196666081-196669374:-|nuORF', 'nc|ENSG00000114503|P52298-3|NCBP2', 'ENSG00000114503|ENST00000321256|NCBP2', 'ENST00000468923.5_1_3:196664263-196669374:-|nuORF'] 90695 8181 RKLVAEVSL True NCI_RA007_Epitope_Rep4 1013.6233297784898 1013.62222993586 38.255 2 0.1361702141917606 0.0012625779546237136 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 21178 19404 EREPLIIAM True PC9_epitope_Rep3 1070.5794163611797 1070.57830993586 79.862 2 0.13616165357983862 0.0012625779546237136 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant'] 107208 21966 SYPDLLPTF True PC9_epitope_Rep4 1051.52261267771 1051.5215099358602 92.705 2 0.13615847469196127 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 43391 19090 IHSDVVFVV True PC9_epitope_Rep1 1013.55458151233 1013.55348993586 78.22 2 0.13614653579917377 0.0012625779546237136 0.9438714419765777 ['ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1', 'ENST00000464431.1_1_3:127395028-127395444:+|nuORF', 'ENST00000491633.5_1_3:127394949-127398855:+|nuORF'] 114044 15323 TRNDIVNML True PC9_epitope_Rep6 1074.54917886206 1074.5480899358602 71.069 2 0.13614372971145186 0.0012625779546237136 0.9438714419765777 ['ENST00000465772.5_1_10:27793310-27827017:+|nuORF', 'ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18'] 28110 14707 FREGESVTVL True PC9_epitope_Rep1 1135.5873381925899 1135.58624993586 61.39 2 0.13613713412083867 0.0012625779546237136 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 116466 12373 TYAPAIHQI True PC9_epitope_Rep1 1012.5341804209202 1012.53308993586 52.452 2 0.1361320709385728 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant'] 43342 17446 IHIITGVAV True PC9_epitope_Rep5 921.5647522732099 921.56364993586 72.105 2 0.13612850265787374 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 36835 13158 GVPSTAIREI True PC9_epitope_Rep1 1041.5818588893299 1041.5807699358602 55.476 2 0.1361115355847567 0.0012625779546237136 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'nc|ENSG00000123374|P24941-2|CDK2'] 84703 18597 QHFDTIYSI True PC9_epitope_Rep5 1122.53457434374 1122.53346993586 76.558 2 0.136111151094701 0.0012625779546237136 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 27743 10376 FQDRPVSSL True PC9_epitope_Rep2 1047.53490869691 1047.53380993586 45.235 2 0.13610748204576198 0.0012625779546237136 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 9526 20994 AYAENIALL True PC9_epitope_Rep1 976.5229470308799 976.52184993586 85.579 2 0.13610305311136836 0.0012625779546237136 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 96042 5165 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 24.944 2 0.13610133572458294 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 8849 8733 AVFPSIVGRPR True NCI_RA007_Epitope_Rep5 1197.69822605425 1197.6965849037902 40.258 3 0.1361009553684236 0.0012625779546237136 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 109714 20826 THFNFAIVF True PC9_epitope_Rep4 1094.5549158654999 1094.55380993586 88.258 2 0.13609529340846235 0.0012625779546237136 0.9438714419765777 ['ENSG00000150459|ENST00000382533|SAP18', 'nc|ENSG00000150459|O00422|SAP18'] 43473 21646 IHVDFPVIL True PC9_epitope_Rep2 1051.60661708519 1051.6055299358602 88.736 2 0.13609440303475318 0.0012625779546237136 0.9438714419765777 ['ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 16263 7221 EEIDISKAA True H1975_Epitope_Rep3 974.49204082542 974.49094993586 32.747 2 0.13608871485159946 0.0012625779546237136 0.9438714419765777 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 34597 14600 GQGQIYVHL True PC9_epitope_Rep5 1013.5294293936499 1013.52832993586 61.16 2 0.13608820766193883 0.0012625779546237136 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 105481 10039 SVATGFSRV True PC9_epitope_Rep5 922.4872302284999 922.48612993586 43.594 2 0.1360834879762987 0.0012625779546237136 0.9438714419765777 ['ENST00000248923.8_1_22:25006313-25006394:+|nuORF', 'ENST00000411974.5_3_22:25003943-25006394:+|nuORF', 'ENST00000447416.5_3_22:25003608-25006394:+|nuORF', 'ENST00000438643.6_1_22:24999197-25006394:+|nuORF', 'ENST00000432867.5_1_22:25003608-25006394:+|nuORF'] 94664 7651 RYLEKPMEI True NCI_RA007_Epitope_Rep3 1177.6165301458898 1177.61488490379 37.219 3 0.13608206499086128 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 8507 16301 ATVPGLLKV True PC9_epitope_Rep2 896.5695033004799 896.56840993586 67.947 2 0.13608027621220722 0.0012625779546237136 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 55224 5055 LAPSGPSGTLK True H1975_Epitope_Rep3 1026.57095985246 1026.5698699358602 24.566 2 0.13607689576878432 0.0012625779546237136 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 98197 13920 SIDSLQLGY True H1975_Epitope_Rep3 994.49712620586 994.49602993586 58.857 2 0.13607302583851733 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 25379 10612 FEIGGTIHP True H1975_Epitope_Rep3 969.49198125577 969.49088993586 45.887 2 0.1360712546229252 0.0012625779546237136 0.9438714419765777 ['ENSG00000138678|ENST00000264409|GPAT3'] 103703 7808 SRDTTMYAV True PC9_epitope_Rep6 1042.47534521546 1042.4742499358601 39.424 2 0.13606351255346805 0.0012625779546237136 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA'] 46613 21316 ITTDVLYTI True PC9_epitope_Rep2 1037.5644774896898 1037.5633899358602 87.456 2 0.1360616542701885 0.0012625779546237136 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 89412 8701 RENPNLVMPP True H1975_Epitope_Rep2 1165.5913780272099 1165.59028993586 38.431 2 0.13606132653417422 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 1248 8967 AEDLPVTEA True H1975_Epitope_Rep1 943.44984166027 943.4492949679301 39.396 1 0.136056077542337 0.0012625779546237136 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 8141 7637 ATFDAISK True PC9_epitope_Rep2 851.43888305375 851.43778993586 34.745 2 0.1360520016741213 0.0012625779546237136 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF', 'ENST00000475555.1_1_4:144270430-144270667:-|nuORF', 'ENST00000488906.1_1_17:45236559-45237015:-|nuORF'] 120335 13898 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 65.297 2 0.13605037430172806 0.0012625779546237136 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 46806 22999 IVDPFQILV True PC9_epitope_Rep4 1042.60628273202 1042.6051899358602 96.685 2 0.136044098435589 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000144034|Q9Y3C4-2|TPRKB', 'ENST00000489476.5_1_2:73956300-73964431:-|nuORF', 'ENST00000470012.1_1_2:73959253-73964442:-|nuORF', 'ENST00000497464.5_1_2:73957656-73964442:-|nuORF', 'ENST00000463231.5_1_2:73956300-73964442:-|nuORF', 'ENSG00000144034|ENST00000272424|TPRKB', 'nc|ENSG00000144034|Q9Y3C4-3|TPRKB'] 109867 13292 THMPSVVGV True PC9_epitope_Rep5 925.4691376362099 925.46804993586 56.139 2 0.13603942053349496 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 45066 4417 IQQNTFTR True NCI_RA007_Epitope_Rep5 1006.51959298594 1006.51848993586 23.621 2 0.13602457945456348 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 103561 19900 SRDELLQVL True PC9_epitope_Rep1 1071.59242357303 1071.5913299358601 81.363 2 0.1360245375951565 0.0012625779546237136 0.9438714419765777 ['ENSG00000187446|ENST00000334660|CHP1', 'ENST00000558351.5_1_15:41556426-41571584:+|nuORF', 'CHP1|p.R140L|1|0.6|ENSG00000187446|chr15:41278774-41278774|G/T|missense_variant'] 9742 8841 AYLEAHETF True NCI_RA007_Epitope_Rep3 1079.4923751785898 1079.4912699358601 41.868 2 0.13601338147548353 0.0012625779546237136 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 101506 12507 SPAAPVITA True PC9_epitope_Rep3 825.45961849833 825.4590749679301 53.133 1 0.13599615937412032 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 124333 8211 VLDQGKITEY True H1975_Epitope_Rep3 1164.60265390356 1164.60154993586 36.566 2 0.13599147660310612 0.0012625779546237136 0.9438714419765777 ['ENSG00000135776|ENST00000344517|ABCB10'] 27734 21258 FQDQQILTL True PC9_epitope_Rep1 1104.58152453616 1104.58097496793 86.593 1 0.13599043224241078 0.0012625779546237136 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 94283 20063 RWSPVRPLVF True PC9_epitope_Rep5 1255.71896149883 1255.7173049037901 82.225 3 0.13598451835771516 0.0012625779546237136 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 38986 10950 HKDAYQVIL True PC9_epitope_Rep4 1085.5869442697701 1085.58584993586 49.889 2 0.13598353508394836 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'ENST00000530300.1_1_11:43333659-43340360:+|nuORF'] 135451 5022 YEAPGVREA True H1975_Epitope_Rep2 990.4770594676198 990.47596993586 24.398 2 0.1359834199007345 0.0012625779546237136 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 21118 12246 ERDPSPWAV True PC9_epitope_Rep6 1055.50360856863 1055.5025099358602 58.483 2 0.13598308807901388 0.0012625779546237136 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 27119 19297 FLQPELVKL True PC9_epitope_Rep4 1085.6484818971699 1085.64738993586 82.331 2 0.13598288071044218 0.0012625779546237136 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4'] 87102 6098 QSEVESTEY True H1975_Epitope_Rep2 1070.44039917538 1070.4393099358601 28.433 2 0.13597396540069695 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 27739 21192 FQDQQILTL True PC9_epitope_Rep5 1104.58152453616 1104.58097496793 86.563 1 0.13597364450771807 0.0012625779546237136 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 67226 11901 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48127496793 50.778 1 0.13596924810009947 0.0012625779546237136 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 31666 6624 GEIASFDKA True NCI_RA007_Epitope_Rep3 936.4552613938799 936.45416993586 33.117 2 0.13596839891222834 0.0012625779546237136 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 132982 20334 VYVEKISFL True PC9_epitope_Rep1 1096.6168474157198 1096.61574993586 83.045 2 0.1359656532692875 0.0012625779546237136 0.9438714419765777 ['ENSG00000171017|ENST00000306708|LRRC8E'] 112984 15435 TPSPLPTV True PC9_epitope_Rep2 810.4487194614601 810.44762993586 64.649 2 0.13596211193552116 0.0012625779546237136 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 105459 14671 SVASELEKI True PC9_epitope_Rep6 974.5284263341399 974.5273299358599 68.358 2 0.1359613959657019 0.0012625779546237136 0.9438714419765777 ['ENSG00000172244|ENST00000306862|C5orf34'] 64526 18161 LRDDTSFVF True PC9_epitope_Rep4 1098.53457434374 1098.53346993586 77.92 2 0.13596079546241238 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 69174 9763 LVLVGDGGTGK True PC9_epitope_Rep2 1014.57095985246 1014.56986993586 42.892 2 0.13595608982453203 0.0012625779546237136 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 70787 9579 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42717496793 41.771 1 0.13594961396071634 0.0012625779546237136 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 120156 11825 VFLENVIR True H1975_Epitope_Rep1 988.5705659296399 988.56946993586 50.48 2 0.13593414598293996 0.0012625779546237136 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 126700 7560 VPRPPDTVST True PC9_epitope_Rep2 1067.56112344475 1067.56002993586 34.449 2 0.13593341653481925 0.0012625779546237136 0.9438714419765777 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 103676 14475 SRDPVQLNL True PC9_epitope_Rep2 1040.56145779792 1040.56036993586 60.948 2 0.13593002432474685 0.0012625779546237136 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 52824 17384 KQVEEIFNL True PC9_epitope_Rep6 1118.5971746003 1118.5960699358602 79.483 2 0.13592702327235132 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 54356 15553 KYQEVTNNLEF True PC9_epitope_Rep2 1383.6670450652698 1383.66594993586 65.097 2 0.13592674759196505 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 109805 18003 THIYDMSTVM True PC9_epitope_Rep5 1196.52058115572 1196.51948993586 74.266 2 0.13592409923687693 0.0012625779546237136 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 72689 13657 MYKLSSEQF True PC9_epitope_Rep4 1131.52704643515 1131.5259499358601 60.423 2 0.13592210022632548 0.0012625779546237136 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 46186 8745 ITDHGSLIY True H1975_Epitope_Rep3 1017.51311062317 1017.51200993586 38.642 2 0.1359142697913119 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 46725 4558 IVAGTLTNK True NCI_RA007_Epitope_Rep5 915.53893144819 915.53782993586 24.191 2 0.1359121227846608 0.0012625779546237136 0.9438714419765777 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 24167 14460 EYTEKMVSI True PC9_epitope_Rep1 1098.52671208198 1098.52560993586 60.444 2 0.1359005665303341 0.0012625779546237136 0.9438714419765777 ['ENSG00000126749|ENST00000599672|EMG1'] 102588 19464 SQANRLFYL True PC9_epitope_Rep1 1110.5821932425 1110.58108993586 79.685 2 0.13589828517853028 0.0012625779546237136 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 119711 13135 VETFAFQA True H1975_Epitope_Rep3 911.4388830537499 911.43833496793 55.772 1 0.13588960502305367 0.0012625779546237136 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 88847 5449 READGILKP True NCI_RA007_Epitope_Rep4 997.5556441414899 997.55454993586 27.539 2 0.135888241370794 0.0012625779546237136 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 9941 20083 AYQSIQNYL True PC9_epitope_Rep2 1098.53457434374 1098.53346993586 82.657 2 0.13588649990326127 0.0012625779546237136 0.9438714419765777 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 5142 9107 ALNIETAIK True H1975_Epitope_Rep1 971.56514619603 971.56404993586 39.934 2 0.13588649182154242 0.0012625779546237136 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 88519 12156 RADGNFLLY True H1975_Epitope_Rep1 1067.53999407735 1067.5388899358602 51.776 2 0.13588413715786885 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 116249 15055 TVVAQLKQL True PC9_epitope_Rep3 998.6124307416198 998.61132993586 63.039 2 0.1358829713564953 0.0012625779546237136 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 72205 8356 MRSPQMVSA True PC9_epitope_Rep1 1005.47357139365 1005.47246993586 36.977 2 0.1358768735033212 0.0012625779546237136 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 39126 16446 HLDLGILYY True H1975_Epitope_Rep2 1105.58079626017 1105.5802749679299 68.479 1 0.1358746500657006 0.0012625779546237136 0.9438714419765777 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 114057 10031 TRNPVSEEL True PC9_epitope_Rep1 1043.52473793603 1043.52364993586 43.452 2 0.1358668606004443 0.0012625779546237136 0.9438714419765777 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.C424Afs*36|1|0.25|ENSG00000168411|chr16:74636502-74636502|A/-|frameshift_variant'] 38553 10070 HHFEGAQIL True PC9_epitope_Rep4 1050.5246783663797 1050.5235899358602 46.401 2 0.13586489379121422 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 140717 16177 YYQGGKFQF True PC9_epitope_Rep1 1136.52909504048 1136.5279899358602 67.039 2 0.1358634637769793 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 39914 17801 HQLESILAM True PC9_epitope_Rep4 1040.5324661687598 1040.53136993586 76.503 2 0.135856684773298 0.0012625779546237136 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 7898 7738 ATATANQIILK True NCI_RA007_Epitope_Rep1 1142.66592286646 1142.66482993586 34.092 2 0.1358559158902366 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 8729 12092 AVDPRFLAY True H1975_Epitope_Rep3 1050.5498304850598 1050.5487299358601 51.676 2 0.1358510806809762 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 27970 19862 FQSSAVMAL True PC9_epitope_Rep3 952.4688032830398 952.46770993586 81.636 2 0.13585062537245354 0.0012625779546237136 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 34717 9323 GQMKEPIQL True NCI_RA007_Epitope_Rep4 1042.5481162329 1042.5470099358602 42.716 2 0.13584327883891334 0.0012625779546237136 0.9438714419765777 ['ENSG00000105483|ENST00000651546|CARD8', 'ENST00000517510.5_1_19:48707456-48744240:-|nuORF', 'ENST00000522773.5_1_19:48714969-48736545:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-7|CARD8', 'ENST00000522051.5_1_19:48714969-48735770:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-1|CARD8', 'nc|ENSG00000105483|Q9Y2G2-4|CARD8'] 65371 10335 LSEPSSLQY True H1975_Epitope_Rep3 1022.49204082542 1022.4909499358599 44.805 2 0.13584058712919236 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 7525 8078 ASETLQSPGY True H1975_Epitope_Rep1 1051.48220441771 1051.48110993586 36.015 2 0.13583333918794718 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'PKMYT1|p.F483Lfs*14|1|0.54|ENSG00000127564|chr16:2973004-2973004|A/-|frameshift_variant', 'ENSG00000127564|ENST00000262300|PKMYT1'] 27919 8646 FQNALLVR True H1975_Epitope_Rep3 959.5552502186699 959.55414993586 38.253 2 0.13583294335436885 0.0012625779546237136 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 14102 13932 DSDSVPAFY True H1975_Epitope_Rep2 999.4185415319898 999.41797496793 58.738 1 0.13582115876746806 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 88521 12499 RADGNFLLY True H1975_Epitope_Rep2 1067.53999407735 1067.5388899358602 53.169 2 0.13581872588098504 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 115431 18111 TVFDEAIRAV True PC9_epitope_Rep6 1119.59242357303 1119.5913299358601 82.299 2 0.1358184246346564 0.0012625779546237136 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000419413.1_1_X:136523419-136523611:-|nuORF'] 107432 19097 SYVAGLPRF True PC9_epitope_Rep5 1008.5392658013599 1008.53816993586 78.486 2 0.13581285760408449 0.0012625779546237136 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'ENST00000325279.4_1_16:84693236-84695736:+|nuORF'] 28420 14414 FSEDGEYFAY True H1975_Epitope_Rep2 1226.4767846840998 1226.4762749679298 60.595 1 0.13581238728010067 0.0012625779546237136 0.9438714419765777 ['ENSG00000085377|ENST00000652536|PREP', 'PREP-SIM1|1|fusion'] 6307 5950 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 28.276 2 0.1358059320060207 0.0012625779546237136 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 123651 13891 VILPTVHEV True PC9_epitope_Rep6 1005.5858816406101 1005.58478993586 65.269 2 0.13580408278691597 0.0012625779546237136 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 7483 15466 ASDYFDQLY True H1975_Epitope_Rep2 1120.47130538084 1120.4707749679299 64.647 1 0.1357986193639951 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 11531 18970 DGLAFNALIHR True PC9_epitope_Rep5 1225.6567551650899 1225.65511490379 77.992 3 0.135798497690797 0.0012625779546237136 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-4|SPTBN4', 'nc|ENSG00000160460|Q9H254-2|SPTBN4', 'ACTN4-CATSPERG|1|fusion'] 113101 11320 TQAEQTLNV True PC9_epitope_Rep1 1002.49818883502 1002.49708993586 48.421 2 0.1357845424341205 0.0012625779546237136 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 29336 11744 FVDSSVGYY True H1975_Epitope_Rep3 1035.45492704071 1035.4543749679299 50.316 1 0.1357827878224486 0.0012625779546237136 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'ENST00000492816.6_1_2:216257645-216258011:-|nuORF', 'FN1-PECR|2|fusion'] 130756 12406 VVDPNQVNV True PC9_epitope_Rep5 982.5083595959001 982.50726993586 52.718 2 0.13577439816672465 0.0012625779546237136 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 130893 11899 VVHDGFEGL True PC9_epitope_Rep6 971.47124581119 971.47014993586 57.003 2 0.13576347356785373 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 8874 11352 AVFPSIVGRPR True PC9_epitope_Rep6 1197.69822605425 1197.6965849037902 54.708 3 0.1357559684307677 0.0012625779546237136 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 76749 19322 NTTDIFQTV True PC9_epitope_Rep4 1037.50293986229 1037.5023749679299 82.43 1 0.13575509189389529 0.0012625779546237136 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 4286 5535 AIITPPPAK True NCI_RA007_Epitope_Rep3 906.5538532363399 906.55274993586 28.769 2 0.13575116186446748 0.0012625779546237136 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 114892 15259 TTEETLTMLY True H1975_Epitope_Rep2 1200.5584061330799 1200.55730993586 63.851 2 0.13572565588567528 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 138301 10518 YRAPEAEL True PC9_epitope_Rep1 947.4712458111899 947.47014993586 45.348 2 0.1357247183881916 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000152332|Q8TAS1-3|UHMK1', 'nc|ENSG00000152332|Q8TAS1-2|UHMK1', 'ENSG00000152332|ENST00000489294|UHMK1'] 4296 16559 AIKEILTQV True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 68.516 2 0.13572369796322442 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1'] 113318 15202 TQILSVPKV True PC9_epitope_Rep4 983.6015317047498 983.60042993586 66.397 2 0.13572276004533598 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 61297 7219 LLDVRDRDSY True H1975_Epitope_Rep1 1250.62551460646 1250.62440993586 32.778 2 0.13571583158043582 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 104102 9955 SRVTNNVVL True PC9_epitope_Rep5 1000.56654317836 1000.56544993586 43.267 2 0.13571321131446043 0.0012850555597550834 0.9438714419765777 ['ENSG00000104147|ENST00000220514|OIP5'] 61047 20504 LLASEVPQL True PC9_epitope_Rep3 968.5542471591598 968.55314993586 84.129 2 0.13570913062132636 0.0012850555597550834 0.9438714419765777 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000467558.5_1_7:2578584-2579570:-|nuORF', 'ENST00000469750.5_1_7:2577705-2579570:-|nuORF'] 116209 18395 TVTSDLLQV True PC9_epitope_Rep6 974.5284263341399 974.5273299358599 83.403 2 0.1357006391669861 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 75527 22180 NQLDSLMGL True PC9_epitope_Rep1 989.48518162317 989.48408993586 90.135 2 0.13569610788780934 0.0012850555597550834 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 104820 10187 STDWHVVNY True H1975_Epitope_Rep1 1119.49852318819 1119.49742993586 44.124 2 0.13569536328985554 0.0012850555597550834 0.9438714419765777 ['ENSG00000147251|ENST00000276202|DOCK11'] 7170 22374 ARDEIIWLL True PC9_epitope_Rep1 1127.63389446219 1127.63278993586 90.877 2 0.13569474871321915 0.0012850555597550834 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 102670 4618 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44466993586 22.635 2 0.13568810302530762 0.0012850555597550834 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 136675 6145 YIEANELK True H1975_Epitope_Rep3 978.5022115863 978.50110993586 28.647 2 0.1356855571589008 0.0012850555597550834 0.9438714419765777 ['ENSG00000172137|ENST00000302628|CALB2'] 45160 19284 IRDNFVIVY True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 79.55 2 0.13567204960502574 0.0012850555597550834 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 86559 8546 QRAQMTAAL True PC9_epitope_Rep5 988.5123994305198 988.51130993586 37.816 2 0.1356627194864194 0.0012850555597550834 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 105825 14616 SVIPQIQKV True PC9_epitope_Rep5 1010.6124307416198 1010.61132993586 61.221 2 0.13566194481354346 0.0012850555597550834 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 11770 14873 DHIHIIAL True PC9_epitope_Rep4 930.52870111766 930.52815496793 65.147 1 0.1356605752479 0.0012850555597550834 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 100484 13122 SLPKGVVEV True PC9_epitope_Rep3 926.54368247546 926.54258993586 55.494 2 0.1356564477811653 0.0012850555597550834 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 61852 19706 LLLDVPTAAV True PC9_epitope_Rep6 1010.6011973515799 1010.60010993586 88.456 2 0.13565343459727414 0.0012850555597550834 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 135913 11261 YETLTITQA True H1975_Epitope_Rep1 1038.5233409536997 1038.52277496793 48.292 1 0.13564178488153192 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 134888 14660 YADGESFLGY True H1975_Epitope_Rep3 1120.4713053808398 1120.4707749679299 61.757 1 0.13563306754302823 0.0012850555597550834 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 116803 21501 TYLPTSPLL True PC9_epitope_Rep5 1003.55899818643 1003.55847496793 87.739 1 0.1356297852164494 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 102759 3720 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 20.447 2 0.13562374783202522 0.0012850555597550834 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 105107 10242 STLPAITLK True NCI_RA007_Epitope_Rep4 942.5749826037401 942.57388993586 46.251 2 0.13561780038226526 0.0012850555597550834 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 109564 13655 THASQIELL True PC9_epitope_Rep2 1010.5396597241798 1010.53856993586 57.816 2 0.13561749011022714 0.0012850555597550834 0.9438714419765777 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 14650 8976 DVNAAIATIK True NCI_RA007_Epitope_Rep3 1014.57095985246 1014.56986993586 42.404 2 0.13561653246256375 0.0012850555597550834 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 47311 21013 IYGEGFQTW True PC9_epitope_Rep5 1099.4974605590298 1099.49636993586 85.883 2 0.13561436237189253 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 23787 20937 EYLADLYHF True PC9_epitope_Rep2 1169.5393253710101 1169.53822993586 85.982 2 0.13561189095760437 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000459646.1_1_22:38039726-38040999:+|nuORF'] 784 9292 AAYYHPSYL True H1975_Epitope_Rep1 1083.5025459394699 1083.5014499358601 40.652 2 0.13560603739451454 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'GSE1|p.P829Lfs*26|1|0.21|ENSG00000131149|chr16:85663456-85663457|CC/T|frameshift_variant', 'GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 106478 14574 SVVGQIAKL True PC9_epitope_Rep4 913.5596668927699 913.55856993586 63.976 2 0.1356046567289771 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 126164 20935 VPFPTPLEA True PC9_epitope_Rep5 969.5171333744498 969.51658496793 85.585 1 0.13560055094144116 0.0012850555597550834 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 124621 5056 VLIAAHGNSLR True NCI_RA007_Epitope_Rep5 1149.66184054553 1149.66019490379 26.147 3 0.1355965165001516 0.0012850555597550834 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 73791 14983 NHDSRLWSL True PC9_epitope_Rep5 1126.55195574338 1126.55084993586 62.636 2 0.13559512571321672 0.0012850555597550834 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 90480 15685 RIYGKFLGL True PC9_epitope_Rep4 1065.6335005393698 1065.63240993586 68.259 2 0.1355897237546711 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'ENST00000556218.5_1_14:102349680-102375988:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 96445 10770 SEILYSAPP True H1975_Epitope_Rep1 975.49131254943 975.4907649679301 46.389 1 0.13557806016276305 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 33701 9470 GLQFPVGR True H1975_Epitope_Rep3 872.4868363056798 872.48572993586 41.43 2 0.13557371074645602 0.0012850555597550834 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'H2AC21|p.R33G|1|0.15|ENSG00000184270|chr1:149887820-149887820|G/C|missense_variant', 'H2AC11|p.A22P|1|0.21|ENSG00000278677|chr6:27133135-27133135|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 76008 10123 NRITDASAL True PC9_epitope_Rep5 959.5036085686299 959.50250993586 43.922 2 0.1355621462545503 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 105575 5789 SVEAAAELSAK True H1975_Epitope_Rep1 1074.55570371114 1074.55460993586 27.339 2 0.13556131304611246 0.0012850555597550834 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 60166 12869 LHYPSTTAL True PC9_epitope_Rep2 1001.51819600361 1001.51708993586 54.801 2 0.13556093878977526 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 8072 8703 ATEESDLAQQY True H1975_Epitope_Rep1 1253.54117584581 1253.5400699358602 38.402 2 0.13555826965082124 0.0012850555597550834 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'ENST00000576380.5_1_17:79813102-79817234:-|nuORF', 'ENST00000466567.2_1_17:79817024-79818356:-|nuORF'] 25225 11874 FEAPSPLGA True H1975_Epitope_Rep3 887.4388830537498 887.43833496793 50.823 1 0.1355460620075014 0.0012850555597550834 0.9438714419765777 ['ENST00000477110.6_1_X:295104-295341:-|nuORF', 'nc|ENSG00000292327|Q9Y5P8-2|PPP2R3B', 'ENSG00000167393|ENST00000390665|PPP2R3B'] 17894 5119 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 24.766 3 0.1355443678885267 0.0012850555597550834 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 48160 12754 KASDLYITL True NCI_RA007_Epitope_Rep1 1022.56481184286 1022.56370993586 53.596 2 0.13554052126833957 0.0012850555597550834 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2'] 55974 15216 LDIDSPPITAR True PC9_epitope_Rep3 1196.6401020414398 1196.63900993586 63.673 2 0.13553756818128485 0.0012850555597550834 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'ENST00000564276.1_1_15:72502555-72511438:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 54834 9788 LAFSRPSQL True H1975_Epitope_Rep2 1017.5607295219299 1017.55962993586 42.636 2 0.13552392491431237 0.0012850555597550834 0.9438714419765777 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 124262 18258 VLDDKLVFV True PC9_epitope_Rep6 1046.60119735158 1046.60010993586 82.871 2 0.1355212700570048 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 73899 10498 NHHMQSISF True PC9_epitope_Rep1 1099.4869129586702 1099.48580993586 45.27 2 0.13552055420417114 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 138478 20827 YRGIFPVL True PC9_epitope_Rep5 963.5541875895099 963.55308993586 85.16 2 0.13551381877261054 0.0012850555597550834 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 11769 14990 DHIHIIAL True PC9_epitope_Rep4 930.52870111766 930.52760993586 65.598 2 0.1355028871738256 0.0012850555597550834 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 97937 9048 SHQGDYAVL True PC9_epitope_Rep4 988.4614094034798 988.46030993586 42.377 2 0.13550222531507086 0.0012850555597550834 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT'] 105865 16536 SVKNGFLTI True PC9_epitope_Rep2 977.55458151233 977.55348993586 68.844 2 0.13549642661199945 0.0012850555597550834 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 2529 8432 [Acetylation]-AEQVALSR True H1975_Epitope_Rep3 914.4821451643598 914.48104993586 37.417 2 0.13549336731631587 0.0012850555597550834 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 38715 7334 HHSNLIAGM True PC9_epitope_Rep4 978.47053461854 978.46942993586 35.54 2 0.13549179738562428 0.0012850555597550834 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 84660 6224 QHEGGVQEL True PC9_epitope_Rep3 995.46722305991 995.46612993586 28.979 2 0.13548688147670762 0.0012850555597550834 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 118980 9145 VEFDSVQSA True NCI_RA007_Epitope_Rep4 980.445090633 980.44454496793 42.017 1 0.13548664368450827 0.0012850555597550834 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 88448 12020 QYTQALEKF True PC9_epitope_Rep6 1126.5658744720197 1126.56476993586 57.524 2 0.13548648155437293 0.0012850555597550834 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 129829 21046 VTLGPVPEI True PC9_epitope_Rep1 923.53278343859 923.5322349679301 85.784 1 0.13548640840982284 0.0012850555597550834 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 25224 11950 FEAPSPLGA True H1975_Epitope_Rep2 887.4388830537498 887.43833496793 51.044 1 0.13548573827954122 0.0012850555597550834 0.9438714419765777 ['ENST00000477110.6_1_X:295104-295341:-|nuORF', 'nc|ENSG00000292327|Q9Y5P8-2|PPP2R3B', 'ENSG00000167393|ENST00000390665|PPP2R3B'] 61201 15994 LLDPASFEY True H1975_Epitope_Rep1 1053.50187723313 1053.50137496793 66.855 1 0.13547946899511384 0.0012850555597550834 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 28395 11652 FSDVDSPYY True H1975_Epitope_Rep3 1091.44475627983 1091.44417496793 49.954 1 0.13547939940484807 0.0012850555597550834 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 16268 13459 EEIEGLISA True NCI_RA007_Epitope_Rep5 959.4811417885498 959.48004993586 58.456 2 0.13547932906665192 0.0012850555597550834 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 60631 6004 LITEDVQGK True NCI_RA007_Epitope_Rep2 1001.5393253710098 1001.53822993586 27.964 2 0.13547733125374375 0.0012850555597550834 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF'] 132412 12289 VYNKVHITL True PC9_epitope_Rep1 1085.62332977849 1085.62222993586 52.123 2 0.1354767656434264 0.0012850555597550834 0.9438714419765777 ['ENSG00000166228|ENST00000299299|PCBD1', 'ENST00000493228.1_1_10:72643709-72647885:-|nuORF'] 74794 20944 NLNPEFISV True PC9_epitope_Rep3 1031.5287606873098 1031.52766993586 85.839 2 0.13547112968642822 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 65368 10365 LSEPSSLQY True H1975_Epitope_Rep1 1022.49204082542 1022.49147496793 44.817 1 0.1354701013493241 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 84934 13671 QHVPGSPFSV True PC9_epitope_Rep4 1053.52434401321 1053.5232499358601 60.477 2 0.13546733355889845 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 34622 19369 GQIEVVPEV True PC9_epitope_Rep3 968.5178616504398 968.51676993586 79.726 2 0.135465030379921 0.0012850555597550834 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 21580 5610 ERSGVNSEL True PC9_epitope_Rep3 989.47778774361 989.47668993586 26.658 2 0.13546485089244464 0.0012850555597550834 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 135688 12244 YEIDKTLGI True H1975_Epitope_Rep1 1050.55972646242 1050.5586299358602 52.118 2 0.1354520469064892 0.0012850555597550834 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1', 'ENST00000490438.1_1_9:95050027-95055918:-|nuORF'] 123113 18443 VHDEGVWAL True PC9_epitope_Rep1 1024.4977949121999 1024.49668993586 75.731 2 0.13544661776553915 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 1799 8668 AEIDAHLVA True H1975_Epitope_Rep2 937.48689587533 937.48578993586 38.301 2 0.13544259599074024 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 140758 18533 YYQSSVQYL True PC9_epitope_Rep5 1149.5342399905699 1149.5331499358601 76.31 2 0.13543824224432505 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 45390 8525 ISDPGVQGY True H1975_Epitope_Rep3 934.43961132974 934.43850993586 37.777 2 0.1354374700244272 0.0012850555597550834 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 131003 19047 VVLGEFGVRNV True PC9_epitope_Rep5 1187.6662572196299 1187.6651699358601 78.292 2 0.13542816160316826 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 77302 12841 NYKDLNGNVF True PC9_epitope_Rep6 1182.5669371011797 1182.5658499358601 60.905 2 0.13542350893340094 0.0012850555597550834 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 131093 19426 VVMEELLKV True PC9_epitope_Rep4 1058.6045684798598 1058.6034699358602 82.835 2 0.13542270571765624 0.0012850555597550834 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'nc|ENSG00000273749|Q7L576-3|CYFIP1', 'nc|ENSG00000273749|Q7L576-2|CYFIP1'] 53710 14342 KYDPNVYSI True PC9_epitope_Rep1 1097.53932537101 1097.53822993586 59.99 2 0.13541946907903385 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 36191 18965 GVFPDNFVKL True PC9_epitope_Rep6 1134.60734536118 1134.6062499358602 85.594 2 0.13541890680917096 0.0012850555597550834 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 40101 6066 HRDGALTQL True PC9_epitope_Rep2 1009.53049202281 1009.52938993586 28.728 2 0.1354146342821666 0.0012850555597550834 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 6899 4970 AQITATIAK True NCI_RA007_Epitope_Rep3 915.5389314481899 915.53782993586 26.545 2 0.13541051631822731 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000011566|Q8IVH8-3|MAP4K3', 'nc|ENSG00000011566|Q8IVH8-2|MAP4K3', 'ENSG00000011566|ENST00000263881|MAP4K3'] 53529 16723 KVPEWVDTV True PC9_epitope_Rep2 1071.5600608155898 1071.5589699358602 69.573 2 0.13540754283560347 0.0012850555597550834 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 1617 6528 AEFVEVTK True H1975_Epitope_Rep3 921.4807478657299 921.4801949679301 30.077 1 0.1354070890989003 0.0012850555597550834 0.9438714419765777 ['CON__P02769'] 65108 13711 LSDPAGAIIY True H1975_Epitope_Rep3 1018.5335117145798 1018.53297496793 58.036 1 0.1354047199391918 0.0012850555597550834 0.9438714419765777 ['ENSG00000178921|ENST00000314666|PFAS'] 89615 9057 RETETVFVP True H1975_Epitope_Rep1 1076.5502244078798 1076.5496749679298 39.747 1 0.13539748533849993 0.0012850555597550834 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 43498 7148 IIALDGDTK True H1975_Epitope_Rep3 944.51786165044 944.51676993586 32.467 2 0.13539708798711278 0.0012850555597550834 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 86247 11377 QPYQPLREV True PC9_epitope_Rep2 1128.5927579261997 1128.5916699358602 49.082 2 0.1353955624535722 0.0012850555597550834 0.9438714419765777 ['ENST00000547003.1_1_12:49916566-49919899:+|nuORF', 'ENST00000549412.5_2_12:49906680-49920035:+|nuORF', 'ENSG00000123352|ENST00000552918|SPATS2'] 26155 17084 FHNELLTQL True PC9_epitope_Rep6 1113.5818588893299 1113.5807699358602 78.281 2 0.1353919757094459 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 76641 15596 NTIDRLIQA True PC9_epitope_Rep3 1042.57710786206 1042.5760099358602 65.138 2 0.13539156319099244 0.0012850555597550834 0.9438714419765777 ['ENST00000371727.5_1_1:51938565-51946964:-|nuORF'] 53830 22008 KYGDIIFDF True PC9_epitope_Rep1 1116.54916177872 1116.5480699358602 89.477 2 0.13538876910753067 0.0012850555597550834 0.9438714419765777 ['ENSG00000164961|ENST00000318410|WASHC5', 'WASHC5|p.Y1056Tfs*28|1|0.3|ENSG00000164961|chr8:125037249-125037252|TGTA/-|frameshift_variant', 'ENST00000523397.1_1_8:126095350-126096053:-|nuORF'] 38466 10200 HGYGFDQAL True NCI_RA007_Epitope_Rep5 1006.4508447197799 1006.44974993586 45.867 2 0.1353864253285837 0.0012850555597550834 0.9438714419765777 ['ENSG00000020129|ENST00000373243|NCDN', 'nc|ENSG00000020129|Q9UBB6-2|NCDN', 'NCDN|p.T251Dfs*6|1|0.16|ENSG00000020129|chr1:35560895-35560896|-/C|frameshift_variant'] 214 21768 AAFPGASLYL True PC9_epitope_Rep2 1008.5280324113198 1008.52692993586 89.201 2 0.13538524294665683 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 43979 6011 ILGPGLNK True NCI_RA007_Epitope_Rep5 810.4963383602201 810.49524993586 29.805 2 0.13538197567115537 0.0012850555597550834 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000426688.1_1_1:81674334-81674790:+|nuORF'] 37311 11601 GVVPTIQKV True PC9_epitope_Rep4 939.5753169569098 939.57420993586 52.384 2 0.1353797094272681 0.0012850555597550834 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 1833 11938 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.4856749679301 51.075 1 0.13537790041035064 0.0012850555597550834 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 106731 19358 SYDPDFNQL True PC9_epitope_Rep2 1097.46655435357 1097.46544993586 79.836 2 0.13537483882129497 0.0012850555597550834 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 24173 12558 EYTLMRATF True NCI_RA007_Epitope_Rep5 1130.5430308524599 1130.54192993586 54.959 2 0.13537220829957367 0.0012850555597550834 0.9438714419765777 ['ENSG00000185950|ENST00000375856|IRS2'] 67543 14492 LTEPTGLLY True H1975_Epitope_Rep2 1005.5382627418498 1005.53767496793 60.901 1 0.13537159002584698 0.0012850555597550834 0.9438714419765777 ['ENSG00000168758|ENST00000305476|SEMA4C'] 7980 4115 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 20.92 2 0.1353622352144442 0.0012850555597550834 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 131502 19118 VVVDPIQSV True PC9_epitope_Rep3 954.53859709502 954.53750993586 78.76 2 0.13536207102088996 0.0012850555597550834 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 14982 20035 DYSSILQKF True PC9_epitope_Rep4 1099.55497543515 1099.55447496793 85.202 1 0.13535877093510137 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 113916 15968 TRIGLINDM True PC9_epitope_Rep2 1031.54336520563 1031.54226993586 66.674 2 0.13535557749570365 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.P364L|1|0.32|ENSG00000107581|chr10:119065430-119065430|G/A|missense_variant'] 69621 16342 LVTYVPVTTF True NCI_RA007_Epitope_Rep4 1138.62741209942 1138.62630993586 70.857 2 0.1353508094506498 0.0012850555597550834 0.9438714419765777 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF', 'ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 37884 7134 HEAIETDIAA True H1975_Epitope_Rep1 1068.50875351872 1068.5076499358602 32.465 2 0.13534775662836038 0.0012850555597550834 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 102704 8710 SQDPYHETL True PC9_epitope_Rep2 1088.4774533904401 1088.47634993586 38.865 2 0.13534677751568688 0.0012850555597550834 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 29312 14544 FVDPNGKISL True PC9_epitope_Rep6 1088.5866099165999 1088.58550993586 67.836 2 0.13534536824614526 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 36839 11814 GVPSTAIREI True PC9_epitope_Rep4 1041.5818588893299 1041.5807699358602 53.21 2 0.13534014598028446 0.0012850555597550834 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'nc|ENSG00000123374|P24941-2|CDK2'] 107216 18154 SYPDNFLHI True PC9_epitope_Rep6 1104.52400966004 1104.52290993586 82.469 2 0.13533359746248474 0.0012850555597550834 0.9438714419765777 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 46225 13889 ITDQGIEFY True H1975_Epitope_Rep1 1084.5076908895599 1084.50717496793 58.573 1 0.13533358214806576 0.0012850555597550834 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF'] 131792 16062 VYAILTHGI True PC9_epitope_Rep6 985.5596668927699 985.55856993586 74.107 2 0.13533089825883787 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 9230 9726 AVQEFGLARFK True NCI_RA007_Epitope_Rep4 1264.6928063206399 1264.6917099358602 44.256 2 0.13532949547175654 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 31667 7016 GEIASFDKA True NCI_RA007_Epitope_Rep4 936.4552613938799 936.45416993586 33.615 2 0.1353273572725933 0.0012850555597550834 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 89232 10862 REIVIIDTP True NCI_RA007_Epitope_Rep4 1054.60225998074 1054.60116993586 48.631 2 0.13532715589375324 0.0012850555597550834 0.9438714419765777 ['ENSG00000106560|ENST00000223293|GIMAP2'] 35698 10964 GTQPWFISK True NCI_RA007_Epitope_Rep5 1062.5498304850598 1062.5487299358601 48.809 2 0.13532320498334957 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'MYLK|p.K903Rfs*3|1|0.3|ENSG00000065534|chr3:123700762-123700762|C/-|frameshift_variant'] 46230 8786 ITDSAGHILY True H1975_Epitope_Rep1 1088.55022440788 1088.5496749679298 38.723 1 0.1353200818213716 0.0012850555597550834 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 118994 16454 VEFLEPLEA True H1975_Epitope_Rep1 1045.5331773614098 1045.53267496793 68.653 1 0.13531898255206354 0.0012850555597550834 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 56878 12035 LEDLPTVEA True H1975_Epitope_Rep3 985.49679185269 985.49624496793 51.453 1 0.13531844546599747 0.0012850555597550834 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 4257 22294 AIIGGMFTV True PC9_epitope_Rep1 907.48372507119 907.48317496793 90.565 1 0.13531565521152156 0.0012850555597550834 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 39780 13525 HQDLSTPVL True PC9_epitope_Rep5 1008.52400966004 1008.52290993586 57.046 2 0.1353153127059137 0.0012850555597550834 0.9438714419765777 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 91574 6833 RPAPPPPTV True PC9_epitope_Rep1 930.5287011176599 930.52760993586 31.09 2 0.13531386330952158 0.0012850555597550834 0.9438714419765777 ['ENST00000464824.2_1_1:155034702-155034975:+|nuORF', 'nc|ENSG00000143537|Q13444-11|ADAM15', 'nc|ENSG00000143537|Q13444-2|ADAM15', 'nc|ENSG00000143537|Q13444-12|ADAM15', 'nc|ENSG00000143537|Q13444-5|ADAM15', 'nc|ENSG00000143537|Q13444-4|ADAM15', 'ENST00000527418.5_1_1:155025082-155034975:+|nuORF', 'nc|ENSG00000143537|Q13444-3|ADAM15', 'ENSG00000143537|ENST00000356955|ADAM15'] 74165 8689 NHYQKQLEI True PC9_epitope_Rep3 1171.5985715826298 1171.59746993586 38.371 2 0.13531019651258872 0.0012850555597550834 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 84608 5250 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 25.582 2 0.13530715656957706 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 73257 7236 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 32.767 2 0.13530679576196625 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 82373 12181 PTVEVDLYTAK True H1975_Epitope_Rep1 1234.6445187155398 1234.64342993586 51.873 2 0.13530272370715318 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 115815 14632 TVMDSKIVQV True PC9_epitope_Rep1 1118.60054572858 1118.59944993586 61.105 2 0.13529568523845237 0.0012850555597550834 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 32088 6741 GEYEWVHKP True NCI_RA007_Epitope_Rep3 1143.53490869691 1143.53326490379 33.606 3 0.13528936850291978 0.0012850555597550834 0.9438714419765777 ['ENSG00000117133|ENST00000370654|RPF1'] 61578 19636 LLGPPPVGV True PC9_epitope_Rep2 847.51673945163 847.51564993586 80.915 2 0.13528912355513248 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 110198 15963 TIDQLYLEY True H1975_Epitope_Rep3 1156.5652057656798 1156.56467496793 66.857 1 0.1352883500399217 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 95642 12593 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 53.308 2 0.13528268932024967 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 28275 10292 FRVPTANVS True PC9_epitope_Rep6 989.5294293936499 989.52832993586 50.276 2 0.13527754260251276 0.0012850555597550834 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'GAPDH|p.A232T|1|0.08|ENSG00000111640|chr12:6537752-6537752|G/A|missense_variant'] 139413 8958 YTEGAELVD True H1975_Epitope_Rep3 995.4447562798299 995.4442049679301 39.452 1 0.13527686826092927 0.0012850555597550834 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 123101 12492 VHAQIVSTL True PC9_epitope_Rep3 966.5498304850599 966.54872993586 53.075 2 0.13527386242197717 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 138582 18656 YRPPELLL True PC9_epitope_Rep4 999.5753169569099 999.57420993586 79.838 2 0.13527339594353174 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12', 'ENSG00000065883|ENST00000181839|CDK13', 'nc|ENSG00000065883|Q14004-2|CDK13'] 140670 15200 YYPSTPGRYSI True PC9_epitope_Rep3 1302.6244519773 1302.62334993586 63.611 2 0.13527237961195024 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 113345 6321 TQKSLSLSPG True NCI_RA007_Epitope_Rep2 1016.5502244078799 1016.54912993586 29.194 2 0.13526681898516196 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 32041 8849 GEVLDPTAA True H1975_Epitope_Rep2 871.4287122928699 871.42816496793 39.004 1 0.1352659735068432 0.0012850555597550834 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1', 'RUSF1|p.Q301H|1|0.38|ENSG00000140688|chr16:31493658-31493658|C/G|missense_variant', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 88870 4521 REAEHLYHTL True NCI_RA007_Epitope_Rep3 1267.6309343400699 1267.62928490379 24.641 3 0.13525830163173702 0.0012850555597550834 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 26994 16343 FLLEKGYEV True PC9_epitope_Rep6 1096.580461907 1096.57936993586 75.237 2 0.13525724394378905 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000112699|O60547-2|GMDS', 'ENSG00000112699|ENST00000380815|GMDS'] 108611 5123 TEINSQRIAA True H1975_Epitope_Rep2 1101.5778361380499 1101.5767299358602 24.781 2 0.13525503903516525 0.0012850555597550834 0.9438714419765777 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 113887 10503 TRHPENWTL True PC9_epitope_Rep5 1152.56760580752 1152.56650993586 45.386 2 0.13523477529129843 0.0012850555597550834 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 95091 16477 RYSTGLAGNLL True PC9_epitope_Rep4 1163.6298717109098 1163.6287699358602 71.35 2 0.13523271096490577 0.0012850555597550834 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 47325 13928 IYGYVAEQF True NCI_RA007_Epitope_Rep4 1088.5178616504397 1088.51676993586 60.85 2 0.13522906404167914 0.0012850555597550834 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 109618 15055 THDGSILIV True PC9_epitope_Rep2 953.51819600361 953.51708993586 63.167 2 0.13521969416488142 0.0012850555597550834 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 28847 10389 FTDPGQVAY True H1975_Epitope_Rep2 996.4552613938799 996.45471496793 44.972 1 0.13521398953682023 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 107761 16258 TAMDVVYAL True NCI_RA007_Epitope_Rep5 981.4841189940099 981.48302993586 69.291 2 0.13521338718418982 0.0012850555597550834 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 133078 10264 WADLGPDKY True H1975_Epitope_Rep2 1063.4974605590298 1063.49636993586 44.486 2 0.1352125035078807 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000168297|Q7Z7A4-5|PXK', 'nc|ENSG00000168297|Q7Z7A4-7|PXK', 'nc|ENSG00000168297|Q7Z7A4-2|PXK', 'nc|ENSG00000168297|Q7Z7A4-6|PXK', 'nc|ENSG00000168297|Q7Z7A4-4|PXK', 'ENSG00000168297|ENST00000356151|PXK'] 113485 9903 TQSEKQLVL True PC9_epitope_Rep5 1044.58152453616 1044.5804299358601 43.063 2 0.1352124828649772 0.0012850555597550834 0.9438714419765777 ['ENSG00000128567|ENST00000378555|PODXL', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENST00000446198.5_1_7:131189072-131193853:-|nuORF'] 94555 10232 RYIPTAAAF True NCI_RA007_Epitope_Rep4 1008.5392658013599 1008.53816993586 46.214 2 0.13520888942140497 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 6066 14222 APMPPIIHA True PC9_epitope_Rep2 945.51060852537 945.50950993586 59.973 2 0.13520663283965212 0.0012850555597550834 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 63287 7857 LPASNLAGKEA True PC9_epitope_Rep5 1069.57677350889 1069.57566993586 35.165 2 0.1352053586561709 0.0012850555597550834 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 46248 10908 ITDSFNATY True H1975_Epitope_Rep2 1030.46074069714 1030.46017496793 46.989 1 0.13520374383826228 0.0012850555597550834 0.9438714419765777 ['ENSG00000165934|ENST00000298875|CPSF2'] 48616 9670 KEIFQTTVP True H1975_Epitope_Rep3 1061.57571087973 1061.57460993586 42.215 2 0.1352026944324976 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 24557 20559 FALPGLLHA True PC9_epitope_Rep2 937.5385375253701 937.53744993586 84.514 2 0.1351904742267377 0.0012850555597550834 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 21126 12094 ERDQATVIL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 51.514 2 0.1351867150689475 0.0012850555597550834 0.9438714419765777 ['ENST00000495360.5_1_9:32987651-32989804:-|nuORF'] 38651 9024 HHMGGMAGL True PC9_epitope_Rep5 909.3949271501299 909.39382993586 39.657 2 0.13518276463671502 0.0012850555597550834 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 89237 10407 REIWNQISA True NCI_RA007_Epitope_Rep4 1115.57235683479 1115.5712499358601 46.883 2 0.135181993863803 0.0012850555597550834 0.9438714419765777 ['ENSG00000197872|ENST00000381323|CYRIA'] 26092 15468 FHEGDVITL True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 71.667 2 0.13518034266868367 0.0012850555597550834 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 97665 20011 SHDEVFVVL True PC9_epitope_Rep3 1043.52876068731 1043.52766993586 82.22 2 0.13517201631830864 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 31874 5570 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.43850993586 26.429 2 0.13517195335016935 0.0012850555597550834 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 140093 12888 YVPETVYRV True PC9_epitope_Rep4 1124.5866099165999 1124.58550993586 57.453 2 0.13516658114457988 0.0012850555597550834 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 2203 5731 AENPKLISA True H1975_Epitope_Rep2 941.5181960036099 941.51708993586 27.042 2 0.13516037974828637 0.0012850555597550834 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 96720 5920 SEQETLVRP True H1975_Epitope_Rep2 1057.54038800017 1057.53928993586 27.758 2 0.13515524935815879 0.0012850555597550834 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'MDM2|p.H134Qfs*73|1|0.37|ENSG00000135679|chr12:68824406-68824409|CCTT/-|frameshift_variant', 'MDM2-NUP107|3|fusion', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2', 'nc|ENSG00000135679|Q00987-7|MDM2', 'ENST00000493419.1_1_12:69202221-69210726:+|nuORF', 'nc|ENSG00000135679|Q00987-9|MDM2', 'nc|ENSG00000135679|Q00987-5|MDM2'] 73636 18466 NGISDLVKV True PC9_epitope_Rep3 943.53384606775 943.53274993586 76.236 2 0.13514732076349292 0.0012850555597550834 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 66068 16364 LSNIFVIGK True PC9_epitope_Rep6 989.5909670210499 989.58986993586 75.329 2 0.13514307850704033 0.0012850555597550834 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 64621 15909 LREPLPATL True PC9_epitope_Rep5 1008.59678067748 1008.59568993586 66.186 2 0.1351389778699105 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 38550 10533 HHFEGAQIL True PC9_epitope_Rep2 1050.5246783663797 1050.5235899358602 45.836 2 0.13513489119828645 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 96412 7489 SEIDMSVKA True H1975_Epitope_Rep2 978.46919720586 978.46808993586 33.756 2 0.1351309809227807 0.0012850555597550834 0.9438714419765777 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 103141 20745 SQMPTVIYV True PC9_epitope_Rep3 1036.5263181591597 1036.52577496793 85.063 1 0.13512444222514092 0.0012850555597550834 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 96041 5069 SEAPGQRALP True H1975_Epitope_Rep2 1024.5301576696397 1024.5290699358602 24.58 2 0.13512423100734056 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 116438 16078 TWTEVSYTF True NCI_RA007_Epitope_Rep5 1132.5076908895599 1132.5065899358601 68.574 2 0.13511745058498753 0.0012850555597550834 0.9438714419765777 ['ENSG00000116663|ENST00000376753|FBXO6'] 89284 4124 RELEVQHPAA True H1975_Epitope_Rep3 1148.59382055536 1148.59272993586 20.987 2 0.13511679509187718 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 140832 13295 YYTDIMHTL True NCI_RA007_Epitope_Rep4 1155.5270464351497 1155.5259499358601 58.28 2 0.1351119620013194 0.0012850555597550834 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 113800 19688 TRDSTFVFM True PC9_epitope_Rep1 1102.5117307241799 1102.5106299358602 80.555 2 0.13511031392680517 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 83742 6050 QEDDRQLIA True H1975_Epitope_Rep2 1086.53055159246 1086.5294499358602 28.249 2 0.1351075529227574 0.0012850555597550834 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 48933 9060 KEYDGVVVV True H1975_Epitope_Rep2 1006.5335117145797 1006.53240993586 39.802 2 0.13510603931621945 0.0012850555597550834 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 21604 16654 ERSNDYFVL True PC9_epitope_Rep6 1141.54038800017 1141.53928993586 76.53 2 0.13510478597767758 0.0012850555597550834 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.R30G|1|0.06|ENSG00000133138|chrX:106802941-106802941|C/G|missense_variant'] 38253 9693 HEYSGLNIV True NCI_RA007_Epitope_Rep3 1030.5083595958997 1030.5072699358602 45.202 2 0.135104542327782 0.0012850555597550834 0.9438714419765777 ['ENSG00000215114|ENST00000399598|UBXN2B'] 115634 22500 TVISLLTGL True PC9_epitope_Rep4 915.56408356687 915.5635349679301 94.776 1 0.135095773946287 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 96771 8466 SEQPTLVTA True H1975_Epitope_Rep3 944.4814761417199 944.48092496793 37.549 1 0.13508815572271024 0.0012850555597550834 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 49417 15776 KILPTLEAV True PC9_epitope_Rep6 982.60628273202 982.60518993586 72.929 2 0.1350840398626965 0.0012850555597550834 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 112923 21869 TPQSIFIFA True PC9_epitope_Rep4 1022.5436824754598 1022.5425899358601 92.328 2 0.13507095804896202 0.0012850555597550834 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 83707 5430 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 25.912 1 0.1350666535486036 0.0012850555597550834 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 75020 14504 NMDNMFESY True H1975_Epitope_Rep1 1149.41069635357 1149.4101749679298 60.992 1 0.13506520012430157 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 2144 8303 AELWKNPTA True H1975_Epitope_Rep1 1028.52909504048 1028.5279899358602 36.869 2 0.13506263041746527 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000175063|O00762-2|UBE2C', 'chr20:45813290-45813437|494|14.5|0.62|4.54|+|ENST00000372568|UBE2C,UBE2C', 'ENSG00000175063|ENST00000356455|UBE2C', 'chr20:45815540-45815854|495|17.2|0.56|4.94|+|ENST00000617055|UBE2C,UBE2C', 'nc|ENSG00000175063|O00762-3|UBE2C', 'nc|ENSG00000175063|O00762-4|UBE2C', 'chr20:45814470-45815390|498|22.16|0.65|5.09|+|ENST00000335046|UBE2C,UBE2C'] 91580 14357 RPAQPTLWTA True PC9_epitope_Rep1 1139.60874234351 1139.60764993586 60.048 2 0.13506216024091292 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 46602 4999 ITSPVVTQK True NCI_RA007_Epitope_Rep4 971.56514619603 971.56404993586 25.709 2 0.1350601460979979 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR', 'ENST00000504466.1_1_5:74645886-74647190:+|nuORF'] 131870 20356 VYDPLFSQL True PC9_epitope_Rep6 1080.54916177872 1080.5480699358602 90.998 2 0.13505962451980108 0.0012850555597550834 0.9438714419765777 ['ENSG00000100104|ENST00000215917|SRRD'] 1519 9986 AEEPWGEEA True H1975_Epitope_Rep2 1016.4087051242799 1016.40760993586 43.401 2 0.1350504314552809 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 96534 11741 SELPGAFEA True H1975_Epitope_Rep1 919.4287122928699 919.42816496793 50.154 1 0.13504870133483451 0.0012850555597550834 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 119100 16558 VEIDPSMLEVA True H1975_Epitope_Rep2 1201.5900406145302 1201.58894993586 68.916 2 0.13503661939917308 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000010165|Q8N6R0-1|METTL13', 'nc|ENSG00000010165|Q8N6R0-4|METTL13', 'ENSG00000010165|ENST00000361735|METTL13', 'nc|ENSG00000010165|Q8N6R0-2|METTL13', 'nc|ENSG00000010165|Q8N6R0-3|METTL13'] 61048 18468 LLASEVPQL True PC9_epitope_Rep6 968.5542471591598 968.55314993586 83.678 2 0.13502757917922636 0.0012850555597550834 0.9438714419765777 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000467558.5_1_7:2578584-2579570:-|nuORF', 'ENST00000469750.5_1_7:2577705-2579570:-|nuORF'] 47090 11688 IVVNLTGR True PC9_epitope_Rep1 870.5287011176599 870.52760993586 49.834 2 0.13502094556347594 0.0012850555597550834 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 45150 11094 IRDEGISAL True PC9_epitope_Rep4 972.52400966004 972.52290993586 50.45 2 0.1350192252954101 0.0012850555597550834 0.9438714419765777 ['ENSG00000100372|ENST00000435456|SLC25A17', 'MKL1-SLC25A17|1|fusion', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 39265 20499 HLPDAAALLPV True PC9_epitope_Rep2 1115.63389446219 1115.63278993586 84.28 2 0.1350183210056041 0.0012850555597550834 0.9438714419765777 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 65110 10140 LSDPGSGLY True H1975_Epitope_Rep1 907.4287122928699 907.42816496793 43.942 1 0.1350182613289501 0.0012850555597550834 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 39881 20592 HQILTPFLL True PC9_epitope_Rep4 1080.6331661862 1080.63206993586 87.359 2 0.13501171330066278 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 126928 13773 VPVEQAVSV True PC9_epitope_Rep2 926.5072969667398 926.50618993586 58.263 2 0.13500487909942308 0.0012850555597550834 0.9438714419765777 ['ENSG00000131899|ENST00000316843|LLGL1'] 18045 13815 EIIRQLNGV True PC9_epitope_Rep1 1040.59784330664 1040.59674993586 57.983 2 0.1350030915633591 0.0012850555597550834 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 55564 6254 LC[Carbamidomethyl]FSTAQHAS True NCI_RA007_Epitope_Rep5 1120.4971435686298 1120.4960499358601 30.732 2 0.13500138837701695 0.0012850555597550834 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000595804.5_1_19:39327364-39328165:-|nuORF', 'ENST00000421896.1_1_6:7481329-7481452:-|nuORF', 'ENST00000595443.5_1_19:39327364-39327562:-|nuORF'] 99611 19345 SLFPGKLEVV True PC9_epitope_Rep4 1087.62774645259 1087.62664993586 82.52 2 0.13499877702319696 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 29712 16963 FVPEIFHRI True PC9_epitope_Rep4 1156.6393141958 1156.63765490379 73.239 3 0.1349983868043641 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 103279 14739 SQTLVSQGL True PC9_epitope_Rep1 931.4974605590301 931.49691496793 61.512 1 0.13499648083300525 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 26027 8130 FHDGSVHIV True PC9_epitope_Rep2 1009.49812926537 1009.49702993586 36.629 2 0.13499255268013394 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 24558 20662 FALPGLLHA True PC9_epitope_Rep2 937.5385375253701 937.53744993586 84.913 2 0.13499063275437653 0.0012850555597550834 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 16469 12273 EELSNVLAA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 52.292 1 0.13498835083530378 0.0012850555597550834 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 137975 7798 YQAEAREAL True PC9_epitope_Rep5 1049.5141732523298 1049.5130699358601 34.939 2 0.13498435398285724 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 70294 20808 LYPEGLAQL True PC9_epitope_Rep2 1002.5385970950199 1002.53807496793 85.479 1 0.1349693322062655 0.0012850555597550834 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 114147 7274 TRSPVKVTL True PC9_epitope_Rep2 999.60767971435 999.60658993586 33.367 2 0.1349650805318227 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 131290 21132 VVQPLLVSV True PC9_epitope_Rep1 952.5957180483199 952.59462993586 86.114 2 0.13495976872270768 0.0012850555597550834 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 14513 9423 DTYLSHFNPR True NCI_RA007_Epitope_Rep1 1248.58873517492 1248.5870849037901 40.647 3 0.13495538538315022 0.0012850555597550834 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 118567 4845 VEAAAELSAK True H1975_Epitope_Rep3 987.5236753068699 987.52256993586 23.762 2 0.13495490150641823 0.0012850555597550834 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 85051 18431 QILDGVHYL True PC9_epitope_Rep4 1056.5603951687601 1056.55928993586 78.964 2 0.1349368051103962 0.0012850555597550834 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 107763 21695 TAMDVVYAL True PC9_epitope_Rep1 981.4841189940099 981.48302993586 88.28 2 0.13492768281689962 0.0012850555597550834 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 52808 8043 KQTEVLVTA True PC9_epitope_Rep5 987.5600608155898 987.55896993586 35.875 2 0.13491419465147791 0.0012850555597550834 0.9438714419765777 ['ENSG00000174606|ENST00000366962|ANGEL2', 'nc|ENSG00000174606|Q5VTE6-2|ANGEL2'] 137165 11939 YLDQM[Oxidation]EDLY True H1975_Epitope_Rep1 1204.4958062569601 1204.49470993586 50.927 2 0.13491034086248901 0.0012850555597550834 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3'] 138927 12800 YSEEIVEM[Oxidation]Y True H1975_Epitope_Rep2 1177.4849072200898 1177.48380993586 54.341 2 0.13490776778511154 0.0012850555597550834 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 103554 10069 SRDDTTLNAL True PC9_epitope_Rep4 1104.54111627616 1104.54000993586 46.397 2 0.13489061698897 0.0012850555597550834 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 4417 12226 AIVDKVPSV True PC9_epitope_Rep4 926.54368247546 926.54258993586 54.847 2 0.1348891413575114 0.0012850555597550834 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 38136 7085 HEQLRAVIV True H1975_Epitope_Rep1 1063.61382772395 1063.6127299358602 32.279 2 0.1348864472966752 0.0012850555597550834 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 4435 15223 AIVKEIVNI True PC9_epitope_Rep6 997.6171817688898 997.61608993586 70.653 2 0.13488541520297564 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 102030 6166 SPPPPPPPP True H1975_Epitope_Rep2 881.4647038787699 881.46360993586 28.69 2 0.1348793532759016 0.0012850555597550834 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 63956 13509 LQADPSVSV True PC9_epitope_Rep5 914.47091145802 914.46980993586 56.982 2 0.13487210982066544 0.0012850555597550834 0.9438714419765777 ['ENSG00000119686|ENST00000238667|FLVCR2'] 6700 7826 AQATISFPK True NCI_RA007_Epitope_Rep3 961.5232813840499 961.52218993586 37.902 2 0.13486864591966827 0.0012850555597550834 0.9438714419765777 ['ENSG00000094804|ENST00000209728|CDC6'] 7935 19745 ATDFGEALV True PC9_epitope_Rep2 921.4443623570098 921.44381496793 81.338 1 0.13485972107817507 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 87924 18955 QVPDWLHHL True PC9_epitope_Rep5 1143.58252759567 1143.5808749037901 77.934 3 0.13485840561128307 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 28579 10853 FSNPRALYL True H1975_Epitope_Rep1 1079.5763795860698 1079.5752899358602 46.705 2 0.134857931265171 0.0012850555597550834 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.Q1049Lfs*8|1|0.14|ENSG00000120800|chr12:101327183-101327186|CCAA/-|frameshift_variant'] 112664 4594 TPFQGQGHGA True PC9_epitope_Rep3 998.4569927293797 998.45588993586 22.767 2 0.13484814233914805 0.0012850555597550834 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 87838 9546 QVISQAAVVHA True PC9_epitope_Rep4 1121.61930702721 1121.61820993586 44.332 2 0.134846370594162 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 49419 17971 KILQELPSV True PC9_epitope_Rep1 1025.6120963884498 1025.61098993586 73.918 2 0.13483815690011242 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 93985 12221 RVPKTLVLV True PC9_epitope_Rep2 1023.6804507317898 1023.6793499358599 52.321 2 0.1348370284149138 0.0012850555597550834 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 106904 24440 SYIPLFPQLYF True PC9_epitope_Rep5 1386.72237511342 1386.7212699358602 99.051 2 0.13483344904805872 0.0012850555597550834 0.9438714419765777 ['ENSG00000165996|ENST00000361271|HACD1'] 46233 8976 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.5496749679298 39.48 1 0.13483212644679796 0.0012850555597550834 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 42536 8388 IESDPVTPP True H1975_Epitope_Rep1 953.47057710485 953.47002496793 37.192 1 0.1348311774499469 0.0012850555597550834 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 40000 18135 HQSGIVQLL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 74.957 2 0.13483026004826437 0.0012850555597550834 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 426 19799 AALPQVVAV True PC9_epitope_Rep1 866.5225531080599 866.52144993586 80.978 2 0.13483015767522905 0.0012850555597550834 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF'] 135590 8126 YEELQSLAGK True H1975_Epitope_Rep1 1136.5713537752797 1136.5702499358601 36.196 2 0.13482959561488292 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 28849 10334 FTDPGQVAY True H1975_Epitope_Rep3 996.4552613938799 996.45471496793 44.801 1 0.13482852445850382 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 75018 14416 NMDNMFESY True H1975_Epitope_Rep1 1149.41069635357 1149.4095899358601 60.648 2 0.1348261486703945 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 21575 5653 ERSGVNSEL True PC9_epitope_Rep1 989.47778774361 989.47668993586 26.567 2 0.13482388267946238 0.0012850555597550834 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 88430 21544 QYSPLLAAF True PC9_epitope_Rep4 1008.5280324113198 1008.52692993586 91.048 2 0.1348143403227189 0.0012850555597550834 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 116720 14931 TYKVISNEF True PC9_epitope_Rep3 1099.5549754351498 1099.5538699358601 62.567 2 0.13480988930243576 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 14096 14174 DSDSDQLFY True H1975_Epitope_Rep3 1088.42983449168 1088.42872993586 59.855 2 0.13480505990205338 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 4421 11496 AIVDKVPSV True PC9_epitope_Rep6 926.54368247546 926.54258993586 55.292 2 0.13479477255362785 0.0012850555597550834 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 57029 4825 LEEERTPTP True H1975_Epitope_Rep3 1070.52440358286 1070.5233099358602 23.686 2 0.13479373175038867 0.0012850555597550834 0.9438714419765777 ['ENSG00000086504|ENST00000199706|MRPL28', 'ENST00000461550.5_1_16:418974-420218:-|nuORF', 'ENST00000483764.5_1_16:418974-420218:-|nuORF', 'ENST00000481453.5_1_16:419744-420512:-|nuORF'] 17183 8056 EHAGGEVEL True PC9_epitope_Rep5 939.42977492203 939.42866993586 35.925 2 0.13479174818314535 0.0012850555597550834 0.9438714419765777 ['ENSG00000218891|ENST00000325421|ZNF579'] 2729 8744 AETSPAPIP True H1975_Epitope_Rep2 881.44944773745 881.4488949679301 38.595 1 0.13479135157337974 0.0012850555597550834 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 3920 15207 AHDGSVFTL True PC9_epitope_Rep2 945.4555957470501 945.45448993586 63.756 2 0.13479100182836717 0.0012850555597550834 0.9438714419765777 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4'] 118751 10359 VEDLRLINT True H1975_Epitope_Rep2 1071.59242357303 1071.5913299358601 44.854 2 0.13478811066621765 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000595844.5_1_19:12787852-12790977:-|nuORF'] 1773 5490 AEHLGEAEVA True H1975_Epitope_Rep2 1024.48253877088 1024.4814499358602 26.13 2 0.13478679862947276 0.0012850555597550834 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 113845 10702 TREEGTPLTL True PC9_epitope_Rep6 1115.5822528121498 1115.5811499358601 51.977 2 0.13478638963952105 0.0012850555597550834 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 61590 19619 LLGPRLVLA True PC9_epitope_Rep3 950.6276868829399 950.62658993586 80.702 2 0.13478587969351583 0.0012850555597550834 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 69175 10416 LVLVGDGGTGK True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 45.004 2 0.13477792801323346 0.0012850555597550834 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 127369 13226 VQPSLFYHL True NCI_RA007_Epitope_Rep3 1102.58113061334 1102.58002993586 59.297 2 0.1347779242380611 0.0012850555597550834 0.9438714419765777 ['MAP3K6|p.D642*|1|0.14|ENSG00000142733|chr1:27360835-27360836|-/A|frameshift_variant', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'ENSG00000142733|ENST00000357582|MAP3K6'] 100485 11535 SLPKGVVEV True PC9_epitope_Rep4 926.54368247546 926.54258993586 52.132 2 0.1347777666394226 0.0012850555597550834 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 34633 14344 GQIGMIQAL True NCI_RA007_Epitope_Rep4 929.5004377644899 929.49934993586 62.481 2 0.13477320265229145 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A4|p.A859V|1|0.26|ENSG00000132681|chr1:160176588-160176588|C/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF'] 88331 20600 QYLQDAYSF True PC9_epitope_Rep1 1133.5029398622898 1133.5023749679299 84.053 1 0.1347693256001362 0.0012850555597550834 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 71120 18502 M[Oxidation]ETVWTILP True H1975_Epitope_Rep2 1104.55253328744 1104.55197496793 76.77 1 0.1347687772171837 0.0012850555597550834 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 108584 15497 TEIDSIPPLP True H1975_Epitope_Rep2 1080.5702911461199 1080.56918993586 64.767 2 0.13476869888825016 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 90178 4964 RHFSGRTITL True NCI_RA007_Epitope_Rep3 1186.65708951826 1186.65544490379 26.523 3 0.1347640524010245 0.0012850555597550834 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF', 'ENST00000470269.5_1_15:58902390-58913692:-|nuORF', 'nc|ENSG00000137845|O14672-2|ADAM10', 'ENST00000482945.5_1_15:58889748-58902828:-|nuORF'] 114247 9310 TRYPANSIV True PC9_epitope_Rep2 1019.5399940773499 1019.53888993586 41.15 2 0.13476297593304187 0.0012850555597550834 0.9438714419765777 ['ENST00000474291.1_1_7:97911152-97911766:+|nuORF', 'ENST00000473967.1_1_7:97911152-97912144:+|nuORF', 'nc|ENSG00000164713|O95415-2|BRI3', 'ENST00000456357.6_1_7:97881701-97920552:+|nuORF', 'ENSG00000164713|ENST00000297290|BRI3'] 46131 5736 ITALAPSTM[Oxidation]K True NCI_RA007_Epitope_Rep2 1047.56343232431 1047.5623299358601 26.927 2 0.1347558889290301 0.0012850555597550834 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 113172 16147 TQDGNIYQL True PC9_epitope_Rep4 1050.4981888350198 1050.49708993586 70.048 2 0.13474517372565786 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 135098 14602 YALYDATYETK True PC9_epitope_Rep3 1336.61869789052 1336.6176099358602 61.298 2 0.1347448000756687 0.0012850555597550834 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 104758 13104 STDLQDYTYY True H1975_Epitope_Rep2 1267.52446315251 1267.52387496793 55.53 1 0.13474370070418318 0.0012850555597550834 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 6090 12357 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 52.841 2 0.13473987484009792 0.0012850555597550834 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 126492 13875 VPMTPLRTV True PC9_epitope_Rep3 1012.5739370579199 1012.57282993586 58.452 2 0.13473929569013984 0.0012850555597550834 0.9438714419765777 ['ENSG00000107949|ENST00000278100|BCCIP'] 130601 16477 VVAEELENV True PC9_epitope_Rep2 1000.50769088956 1000.50658993586 68.62 2 0.134735524965601 0.0012850555597550834 0.9438714419765777 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.R96H|1|0.24|ENSG00000167196|chr15:75913210-75913210|G/A|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 95089 7911 RYSSM[Oxidation]AASF True PC9_epitope_Rep5 1034.44913084806 1034.4480299358602 35.371 2 0.13473009836216981 0.0012850555597550834 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 9399 5204 AVVGVVAGGGR True NCI_RA007_Epitope_Rep5 940.5454138109598 940.54430993586 26.714 2 0.13472781782812912 0.0012850555597550834 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8'] 132571 19727 VYPNSFFRY True PC9_epitope_Rep3 1191.5712942056298 1191.57018993586 81.108 2 0.13471931474532126 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1'] 35561 15862 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.5172549679301 66.164 1 0.13471632040771567 0.0012850555597550834 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 104307 16545 SSELFTLTY True H1975_Epitope_Rep3 1059.51244191683 1059.51187496793 69.136 1 0.13471619893920564 0.0012850555597550834 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 64512 11327 LRAPASSCESL True PC9_epitope_Rep1 1132.55465816532 1132.5535699358602 48.448 2 0.13471594752925495 0.0012850555597550834 0.9438714419765777 ['ENST00000336273.7_1_8:98656420-98656720:+|nuORF'] 45411 8943 ISDSDYQAEY True H1975_Epitope_Rep1 1189.47751296009 1189.4764099358601 39.303 2 0.1347139363870398 0.0012850555597550834 0.9438714419765777 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3'] 34945 8710 GQWKKGFVL True NCI_RA007_Epitope_Rep5 1061.6022004110898 1061.6011099358602 40.169 2 0.13471389498144803 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 16503 9455 EENFAVEA True H1975_Epitope_Rep3 907.3923267841499 907.39122993586 41.372 2 0.13470551827120056 0.0012850555597550834 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 95156 7836 [Acetylation]-SAAEAGGVFHR True H1975_Epitope_Rep1 1142.5468706792399 1142.54576993586 35.091 2 0.13470460403778653 0.0012850555597550834 0.9438714419765777 ['ENSG00000103381|ENST00000381774|CPPED1', 'ENST00000539677.1_1_16:12874994-12897657:-|nuORF', 'nc|ENSG00000103381|Q9BRF8-3|CPPED1', 'nc|ENSG00000103381|Q9BRF8-2|CPPED1'] 87337 5334 QTATQLLK True NCI_RA007_Epitope_Rep5 901.5232813840499 901.52218993586 27.209 2 0.13470389917922335 0.0012850555597550834 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF', 'RPL7A|p.R89H|1|0.07|ENSG00000148303|chr9:133349692-133349692|G/A|missense_variant', 'ENST00000437848.1_1_1:46117146-46117242:-|nuORF', 'ENST00000485706.5_1_9:136216467-136216912:+|nuORF', 'ENST00000424559.2_1_22:19780074-19780431:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 41977 6596 IEDFRQATA True H1975_Epitope_Rep3 1049.51417325233 1049.5130699358601 30.325 2 0.1346929796188749 0.0012850555597550834 0.9438714419765777 ['ENSG00000167264|ENST00000565263|DUS2'] 48988 11653 KFDQLLAEEK True PC9_epitope_Rep5 1219.6448530687096 1219.6437499358601 49.818 2 0.134688710912974 0.0012850555597550834 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 76516 15912 NTDLGNDLYF True H1975_Epitope_Rep2 1170.5193182024198 1170.51822993586 66.406 2 0.13468295294228153 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 43235 10686 IHADFENTC True PC9_epitope_Rep5 1048.4283950230401 1048.42728993586 46.095 2 0.13468021120194532 0.0012850555597550834 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP', 'ENST00000488537.1_1_1:145440216-145440639:+|nuORF'] 90686 11695 RKLMMILAM True NCI_RA007_Epitope_Rep3 1105.6173991763699 1105.61630993586 53.118 2 0.13466804706092894 0.0012850555597550834 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 75839 11423 NRDLATPVM True PC9_epitope_Rep1 1015.51206507735 1015.51096993586 48.817 2 0.13466224296405047 0.0012850555597550834 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 133244 9669 WEEETVPTT True H1975_Epitope_Rep2 1090.4818700645399 1090.48076993586 42.173 2 0.13466018760586418 0.0012850555597550834 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 25941 12794 FGQLGREL True PC9_epitope_Rep2 918.49231560894 918.49120993586 54.514 2 0.1346557046608826 0.0012850555597550834 0.9438714419765777 ['ENSG00000277150|ENST00000622749|F8A3'] 17778 21412 EHVLLVSIL True PC9_epitope_Rep5 1021.61718176889 1021.61608993586 87.425 2 0.1346509951209078 0.0012850555597550834 0.9438714419765777 ['ENSG00000146909|ENST00000275820|NOM1'] 26736 21679 FLDGNELTL True PC9_epitope_Rep5 1020.51277627 1020.51166993586 88.436 2 0.13465052928550889 0.0012850555597550834 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 55850 18310 LDFEHFLPM[Oxidation]LQ True H1975_Epitope_Rep1 1404.6747736784398 1404.67366993586 76.306 2 0.1346429773986202 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000412707.1_1_17:69617202-69617574:+|nuORF'] 3898 10778 AHDDSVM[Oxidation]YL True PC9_epitope_Rep2 1065.44371111445 1065.4426099358602 46.775 2 0.13463332214990428 0.0012850555597550834 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 45206 17339 IRKPYIWEY True PC9_epitope_Rep1 1266.67609362734 1266.6744449037901 71.508 3 0.1346265267926851 0.0012850555597550834 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 86227 16103 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.4631649679301 66.758 1 0.13462371032520812 0.0012850555597550834 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 84663 6159 QHEGGVQEL True PC9_epitope_Rep5 995.46722305991 995.46612993586 28.675 2 0.13462133632256854 0.0012850555597550834 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 17825 7092 EIAENALGK True PC9_epitope_Rep5 943.4974605590298 943.49636993586 32.245 2 0.13461640700504449 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'ENST00000469172.5_1_10:70097616-70097877:+|nuORF'] 108419 8510 TEEENYNVV True H1975_Epitope_Rep2 1095.47203365683 1095.47092993586 37.689 2 0.1346137831789809 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000184178|Q8WU76-2|SCFD2', 'ENSG00000184178|ENST00000401642|SCFD2'] 101539 10097 SPAPPPPAV True PC9_epitope_Rep5 831.4490538146299 831.44794993586 43.822 2 0.13461145072236255 0.0012850555597550834 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 18025 10684 EIIDPVLDR True H1975_Epitope_Rep3 1068.5815245361598 1068.5804299358601 46.171 2 0.13461081444804532 0.0012850555597550834 0.9438714419765777 ['ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF'] 73223 7366 NEGVATYAAA True H1975_Epitope_Rep3 965.4454249861698 965.4448749679301 33.31 1 0.1346105106873399 0.0012850555597550834 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 95355 5624 SAHAGTYEV True PC9_epitope_Rep3 933.4192102383299 933.41810993586 26.711 2 0.13460837048654603 0.0012850555597550834 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 86695 14883 QRIDEFESM True PC9_epitope_Rep3 1153.5073736197298 1153.50626993586 62.383 2 0.13459189132865546 0.0012850555597550834 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 62221 16589 LLPSRQFGF True PC9_epitope_Rep6 1063.5814649665099 1063.58036993586 76.261 2 0.13458636569259116 0.0012850555597550834 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 40058 17899 HQYDGLVEL True PC9_epitope_Rep3 1072.5189242795998 1072.5178299358602 74.05 2 0.13457773426911315 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 7922 13020 ATDDITELY True H1975_Epitope_Rep3 1039.47097102767 1039.46986993586 55.318 2 0.13456452085604412 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 71902 11287 MPQSGTGVSV True PC9_epitope_Rep1 961.45388149489 961.45278993586 48.296 2 0.13456366093554203 0.0012850555597550834 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 114301 8513 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.58478993586 39.429 2 0.13455911531892842 0.0012850555597550834 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 54199 17342 KYPENFFLL True NCI_RA007_Epitope_Rep1 1169.61209638845 1169.61098993586 71.59 2 0.13455398459883247 0.0012850555597550834 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 64544 9470 LRDENVNVV True PC9_epitope_Rep5 1056.5563724174801 1056.55526993586 41.383 2 0.13455253922347665 0.0012850555597550834 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 126830 4854 VPSYPSKSA True PC9_epitope_Rep3 934.47599683846 934.47488993586 23.768 2 0.1345499407014401 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 70340 21783 LYPQFMFHL True PC9_epitope_Rep2 1194.5895871220598 1194.58848993586 89.259 2 0.13454224472484852 0.0012850555597550834 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 117154 11233 TYSPALNKM[Oxidation]F True PC9_epitope_Rep6 1186.5692459807399 1186.5681499358602 54.205 2 0.1345411737315756 0.0012850555597550834 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 95259 11008 SADPNVVDL True H1975_Epitope_Rep1 928.45017601344 928.44906993586 47.303 2 0.13453991537836776 0.0012850555597550834 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 102431 10875 SPVYVGRVV True PC9_epitope_Rep4 974.5549158654999 974.55380993586 49.594 2 0.13453702926265718 0.0012850555597550834 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 106834 22923 SYIALPLTL True PC9_epitope_Rep2 989.57973363101 989.57862993586 93.678 2 0.13453478490616433 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 73282 5497 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.50692993586 26.197 2 0.13453352103677854 0.0012850555597550834 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 130943 9578 VVINYSIVK True NCI_RA007_Epitope_Rep3 1033.6171817688898 1033.6160899358601 44.76 2 0.13453037286677577 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 76773 15073 NVDAILEEY True H1975_Epitope_Rep2 1064.50260550912 1064.5015099358602 63.128 2 0.1345141928068984 0.0012850555597550834 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2'] 116509 11533 TYDYNFHSF True NCI_RA007_Epitope_Rep3 1192.48253877088 1192.4814499358602 52.493 2 0.13451407108911584 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 138570 4630 YRPGTVALR True NCI_RA007_Epitope_Rep5 1031.5876129761098 1031.58650993586 24.488 2 0.13450783146434872 0.0012850555597550834 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'H3C13|p.H40Q|1|0.1|ENSG00000183598|chr1:149813562-149813562|G/C|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 104414 14459 SSIEHLTTL True PC9_epitope_Rep3 999.52367530687 999.52256993586 60.722 2 0.13450502300173145 0.0012850555597550834 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 2107 4942 AELPSRAP True H1975_Epitope_Rep3 839.45011644379 839.44900993586 24.137 2 0.13449997172509712 0.0012850555597550834 0.9438714419765777 ['ENST00000403892.7_1_22:37414793-37415237:-|nuORF'] 108397 5984 TEEAAVAIKA True H1975_Epitope_Rep2 1001.5393253710098 1001.53822993586 27.996 2 0.1344990655996908 0.0012850555597550834 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 76830 7661 NVGAPDVTLR True H1975_Epitope_Rep1 1040.56145779792 1040.56036993586 34.443 2 0.13449869217740004 0.0012850555597550834 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 74240 14810 NIDPITMAY True H1975_Epitope_Rep2 1036.48993265044 1036.48937496793 62.123 1 0.13448744462842835 0.0013200573282039676 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 86521 14855 QRALLANAL True PC9_epitope_Rep3 968.5767139392399 968.57560993586 62.276 2 0.13448708922299374 0.0013200573282039676 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 61874 13546 LLLEVISGER True NCI_RA007_Epitope_Rep1 1127.65502382959 1127.65392993586 56.7 2 0.13448662933657304 0.0013200573282039676 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 8461 8427 ATSVITIVK True NCI_RA007_Epitope_Rep4 930.57498260374 930.57388993586 39.229 2 0.13447689347041444 0.0013200573282039676 0.9438714419765777 ['ENSG00000197063|ENST00000357736|MAFG'] 137064 6312 YLAEVASGEK True NCI_RA007_Epitope_Rep1 1065.5342399905699 1065.5331499358601 28.577 2 0.13447437758407843 0.0013200573282039676 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 63 13020 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 55.2 1 0.1344660478781394 0.0013200573282039676 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 14582 6187 DVGKDQEFTVK True NCI_RA007_Epitope_Rep1 1264.6299312805597 1264.62829490379 28.101 3 0.1344499984573419 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 129942 5385 VTNDGATILK True NCI_RA007_Epitope_Rep3 1030.56587447202 1030.56476993586 28.189 2 0.13444101215477988 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF', 'ENST00000550455.5_1_12:69979244-69981425:+|nuORF', 'ENST00000546859.5_1_12:69979244-69981900:+|nuORF', 'ENST00000550638.5_1_12:69979244-69982049:+|nuORF'] 9906 21400 AYPEYLITY True PC9_epitope_Rep5 1131.54882742555 1131.54827496793 87.378 1 0.13444088811901886 0.0013200573282039676 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS'] 116227 20969 TVTTVILEV True PC9_epitope_Rep2 973.5695628701299 973.56846993586 86.107 2 0.13443784515202156 0.0013200573282039676 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 113814 8856 TREAGSALL True PC9_epitope_Rep1 916.4977949121999 916.49668993586 38.905 2 0.13443689038804757 0.0013200573282039676 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2', 'CCNA2|p.A20P|1|0.15|ENSG00000145386|chr4:121823571-121823571|C/G|missense_variant'] 9407 8253 AVVIVDDR True PC9_epitope_Rep1 885.4919812557699 885.49088993586 36.579 2 0.13443389435553077 0.0013200573282039676 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 47306 21077 IYGEGFQTW True PC9_epitope_Rep1 1099.4974605590298 1099.49636993586 85.905 2 0.13442604298425864 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 59904 20273 LHIDPNFASL True PC9_epitope_Rep5 1125.58185888933 1125.5807699358602 83.031 2 0.13442484613067013 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 27650 20225 FQDDNNLYL True PC9_epitope_Rep1 1140.50875351872 1140.5076499358602 82.625 2 0.1344241530933248 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 60218 8050 LIDENDNKI True PC9_epitope_Rep4 1072.540053647 1072.53894993586 38.414 2 0.1344221256480082 0.0013200573282039676 0.9438714419765777 ['ENST00000482091.1_1_10:1089912-1094811:-|nuORF', 'nc|ENSG00000067064|Q13907|IDI1', 'ENSG00000067064|ENST00000381344|IDI1'] 35772 5062 GTVIHFNNPK True NCI_RA007_Epitope_Rep3 1125.59309227937 1125.59143490379 26.905 3 0.13442061878866554 0.0013200573282039676 0.9438714419765777 ['RGNEF-BTF3|1|fusion', 'nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3', 'nc|ENSG00000134717|Q96K17-2|BTF3L4', 'ENSG00000134717|ENST00000313334|BTF3L4'] 76581 5883 NTEEEGLKY True H1975_Epitope_Rep1 1081.4927691014097 1081.49166993586 27.699 2 0.1344186061614762 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1'] 108585 13986 TEIDSVPPLP True H1975_Epitope_Rep2 1066.55464108198 1066.55354993586 58.945 2 0.13440894526692065 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 8919 13909 AVGKIFSNV True PC9_epitope_Rep5 933.52836676449 933.52726993586 58.521 2 0.13440641008378543 0.0013200573282039676 0.9438714419765777 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 31652 7499 GEHSIYCTV True NCI_RA007_Epitope_Rep3 1007.43823143075 1007.43712993586 36.62 2 0.1344044881280971 0.0013200573282039676 0.9438714419765777 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'ENST00000465534.5_1_1:207500166-207510288:+|nuORF', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 27991 11086 FQVDTSKAGV True PC9_epitope_Rep5 1050.53457434374 1050.53346993586 47.63 2 0.1344007644768499 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 15143 12092 EAEPHPLWEY True H1975_Epitope_Rep1 1269.56660274801 1269.56550993586 51.525 2 0.13438705536741433 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 39085 12260 HLAEVLERV True PC9_epitope_Rep4 1064.59784330664 1064.59674993586 54.976 2 0.1343844333833786 0.0013200573282039676 0.9438714419765777 ['ENSG00000155827|ENST00000389120|RNF20'] 115702 22238 TVLEQVLPI True PC9_epitope_Rep3 1010.6011973515798 1010.60010993586 90.824 2 0.13437853340696165 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 38746 9604 HHVEPLERL True PC9_epitope_Rep5 1128.60399131624 1128.60235490379 41.904 3 0.13437418887403124 0.0013200573282039676 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 28843 13786 FTDPGMGNLTY True H1975_Epitope_Rep2 1214.52777471114 1214.5266699358601 58.173 2 0.134373329914074 0.0013200573282039676 0.9438714419765777 ['ENSG00000134569|ENST00000378623|LRP4'] 44074 23423 ILLPQFLGV True PC9_epitope_Rep2 998.6164534928998 998.61534993586 95.569 2 0.1343704940915596 0.0013200573282039676 0.9438714419765777 ['ENSG00000099282|ENST00000373290|TSPAN15'] 87683 8238 QVDLNQQQY True H1975_Epitope_Rep2 1134.5305515924601 1134.5294499358602 36.639 2 0.13435080245333272 0.0013200573282039676 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 132703 20717 VYSEVAAYEF True PC9_epitope_Rep1 1176.5339056373998 1176.53280993586 84.513 2 0.13434980030229698 0.0013200573282039676 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 126774 5234 VPSLQGEKA True PC9_epitope_Rep6 927.5025459394699 927.50144993586 27.913 2 0.13434489763651897 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 140425 19630 YYFEGIKQTF True PC9_epitope_Rep2 1294.6233893481397 1294.6228749679299 80.891 1 0.13434114285894244 0.0013200573282039676 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 38881 16505 HIIENIVAV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 71.457 2 0.1343400812798304 0.0013200573282039676 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 108358 4798 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 23.583 2 0.13433848657728878 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 124324 13509 VLDPYLLKY True H1975_Epitope_Rep1 1122.63249747986 1122.6319749679299 57.082 1 0.13433255850613207 0.0013200573282039676 0.9438714419765777 ['ENSG00000239789|ENST00000285298|MRPS17'] 37682 14046 HALGLLYHV True PC9_epitope_Rep4 1021.5709002828102 1021.56980993586 61.937 2 0.13432663976167422 0.0013200573282039676 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 17257 9216 EHAQEVVL True PC9_epitope_Rep5 923.4712458111899 923.47014993586 40.395 2 0.13432131516595905 0.0013200573282039676 0.9438714419765777 ['ENSG00000080608|ENST00000397885|PUM3'] 86929 6101 QRSGNVAEL True PC9_epitope_Rep1 972.4988575413598 972.49776993586 28.282 2 0.13431128838893322 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 72896 20528 NAVVELVTV True PC9_epitope_Rep2 942.5385970950199 942.53750993586 84.393 2 0.13431119074241413 0.0013200573282039676 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 32466 6948 GGIGTVPVGR True NCI_RA007_Epitope_Rep2 911.5188647099499 911.51776993586 31.646 2 0.13430363072027102 0.0013200573282039676 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 109913 19268 THQPVFIQL True PC9_epitope_Rep3 1081.59202965021 1081.59092993586 79.337 2 0.1342917221716143 0.0013200573282039676 0.9438714419765777 ['ENSG00000123104|ENST00000381340|ITPR2'] 6060 14540 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 60.752 2 0.13428576196921369 0.0013200573282039676 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 105847 20405 SVITQVFHV True PC9_epitope_Rep3 1028.5654805492 1028.5643899358602 83.741 2 0.13428520790089796 0.0013200573282039676 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 139335 12712 YTDSSSILNY True H1975_Epitope_Rep2 1161.51898384925 1161.51788993586 53.997 2 0.13428389138190397 0.0013200573282039676 0.9438714419765777 ['ENSG00000111647|ENST00000279907|BLTP3B'] 65082 19633 LSDLLTDFV True H1975_Epitope_Rep2 1021.53317736141 1021.53208993586 81.458 2 0.13428344555472163 0.0013200573282039676 0.9438714419765777 ['ENSG00000170185|ENST00000307017|USP38', 'nc|ENSG00000170185|Q8NB14-2|USP38'] 31830 16301 GENPLQVLV True H1975_Epitope_Rep1 967.5338460677499 967.53329496793 68.057 1 0.13428005697333406 0.0013200573282039676 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 7270 10128 ARPPGYEF True PC9_epitope_Rep2 935.45011644379 935.44900993586 44.295 2 0.13427808383500248 0.0013200573282039676 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 135628 8199 YEEQPGLQP True H1975_Epitope_Rep2 1059.4872897981497 1059.48618993586 36.49 2 0.13426796301581576 0.0013200573282039676 0.9438714419765777 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 17165 14086 EHAEALLL True PC9_epitope_Rep4 894.4810822188999 894.47998993586 62.091 2 0.13425637152116246 0.0013200573282039676 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 5239 7488 ALQEM[Oxidation]VHQV True PC9_epitope_Rep5 1069.52263014149 1069.5215299358601 33.753 2 0.1342429428002184 0.0013200573282039676 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 2501 12946 AEQPYFIEA True H1975_Epitope_Rep3 1066.49712620586 1066.49657496793 55.027 1 0.1342424606984696 0.0013200573282039676 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B'] 95360 13527 SAHLFEVEL True NCI_RA007_Epitope_Rep3 1043.52876068731 1043.52766993586 60.498 2 0.1342413036447671 0.0013200573282039676 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000473899.1_1_2:220473145-220474007:+|nuORF'] 106470 5761 SVVGNFQEK True NCI_RA007_Epitope_Rep3 1006.5083595959 1006.50726993586 29.641 2 0.1342363684506088 0.0013200573282039676 0.9438714419765777 ['ENSG00000180061|ENST00000326652|TMEM150B'] 47245 10140 IYEGYALPH True NCI_RA007_Epitope_Rep2 1061.5181960036098 1061.5170899358602 44.032 2 0.13422758287358635 0.0013200573282039676 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 9975 8957 AYSRVQYQF True NCI_RA007_Epitope_Rep4 1160.5614577979202 1160.56036993586 41.289 2 0.13422162931439077 0.0013200573282039676 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 132841 21525 VYTPTDTLVF True PC9_epitope_Rep2 1154.5859412102598 1154.5848499358601 88.263 2 0.1342208190905844 0.0013200573282039676 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000525379.1_1_11:66985159-66986889:+|nuORF'] 43763 21567 IIYDFEDPEM True PC9_epitope_Rep3 1270.54275606894 1270.54164993586 88.253 2 0.1342072981453934 0.0013303769401330377 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 133038 20066 VYVSDIQEL True PC9_epitope_Rep1 1064.5389910178399 1064.5378899358602 82.01 2 0.13420620060434693 0.0013303769401330377 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 140554 21441 YYLNEIQSF True PC9_epitope_Rep1 1175.5498900547097 1175.54937496793 87.311 1 0.13420110019182888 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 18742 17505 ELDPAVMDQFY True H1975_Epitope_Rep2 1326.5802042068199 1326.57910993586 72.625 2 0.13419631053388187 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000123505|P17707-2|AMD1', 'ENSG00000123505|ENST00000368885|AMD1'] 140481 16237 YYIFIPSKF True NCI_RA007_Epitope_Rep1 1176.6219327961599 1176.62082993586 67.266 2 0.1341946266174131 0.0013303769401330377 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 127320 19048 VQNDTLLQV True PC9_epitope_Rep1 1028.5502244078798 1028.54912993586 78.059 2 0.13419266877420358 0.0013303769401330377 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 6222 5389 APRGDGVQVSA True PC9_epitope_Rep5 1055.5359713260698 1055.5348699358601 25.742 2 0.1341907178013812 0.0013303769401330377 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 126510 11560 VPNKFLVTA True PC9_epitope_Rep6 987.5753169569099 987.57420993586 55.57 2 0.13418557959874836 0.0013303769401330377 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 132392 12426 VYNENLVHMI True NCI_RA007_Epitope_Rep4 1230.60669373818 1230.60558993586 54.803 2 0.13416687251178883 0.0013303769401330377 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 63254 18183 LPALAGVSA True PC9_epitope_Rep1 797.46470387877 797.4641549679301 74.731 1 0.13416322133664277 0.0013303769401330377 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 7175 22293 ARDEIIWLL True PC9_epitope_Rep5 1127.63389446219 1127.63278993586 90.757 2 0.13416023444872763 0.0013303769401330377 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 128913 16619 VSTLPAITLK True PC9_epitope_Rep1 1041.64339651673 1041.6422899358602 68.751 2 0.13415938411561293 0.0013303769401330377 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 53081 15601 KSDPFLVFY True H1975_Epitope_Rep2 1114.5698972233 1114.5688099358601 65.165 2 0.13415799065566467 0.0013303769401330377 0.9438714419765777 ['ENSG00000124772|ENST00000244751|CPNE5', 'ENST00000551855.1_1_12:39120300-39161507:-|nuORF', 'ENSG00000139117|ENST00000331366|CPNE8', 'ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000144550|Q8IYJ1-2|CPNE9'] 87387 13887 QTDNIIYVY True H1975_Epitope_Rep3 1127.5498900547097 1127.54937496793 58.726 1 0.13415404452599958 0.0013303769401330377 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF', 'IFT172|p.K94N|1|0.12|ENSG00000138002|chr2:27485032-27485032|C/G|missense_variant'] 105824 13445 SVIPQIQKV True PC9_epitope_Rep4 1010.6124307416198 1010.61132993586 59.613 2 0.13415353890860587 0.0013303769401330377 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 38552 9980 HHFEGAQIL True PC9_epitope_Rep4 1050.5246783663797 1050.5235899358602 46.048 2 0.13415274993608298 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 81241 7915 PPPAPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 37.875 2 0.13413188131913575 0.0013303769401330377 0.9438714419765777 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'BOD1L1|p.V1300*|1|0.17|ENSG00000038219|chr4:13603002-13603002|C/-|frameshift_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'ENST00000480400.1_1_2:175446032-175450310:-|nuORF', 'nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'nc|ENSG00000162105|Q9UPX8-1|SHANK2', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000038219|ENST00000040738|BOD1L1', 'ENSG00000162105|ENST00000601538|SHANK2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENSG00000271601|ENST00000604000|LIX1L'] 138983 10055 YSEVYPGQQY True H1975_Epitope_Rep3 1232.5349682665599 1232.53437496793 43.713 1 0.13412650164218853 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 26093 9685 FHEGEAVSV True PC9_epitope_Rep1 973.4505103666098 973.44940993586 42.109 2 0.13412420960162147 0.0013303769401330377 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1'] 102840 11978 SQFSGKITV True PC9_epitope_Rep1 965.51819600361 965.51708993586 50.935 2 0.13412058188850573 0.0013303769401330377 0.9438714419765777 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 136393 13044 YHEDIHTYL True PC9_epitope_Rep5 1189.54038800017 1189.53874490379 55.178 3 0.1341159410266003 0.0013303769401330377 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2'] 77289 17832 NYISGIQTI True PC9_epitope_Rep6 1007.52876068731 1007.52817496793 81.221 1 0.13411403694217472 0.0013303769401330377 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 105307 8704 STTQVVGILK True NCI_RA007_Epitope_Rep4 1044.6179100448799 1044.6168099358601 40.27 2 0.1341065770114964 0.0013303769401330377 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 105814 21306 SVINFLDQL True PC9_epitope_Rep6 1047.5600608155898 1047.5589699358602 94.807 2 0.13410176490345194 0.0013303769401330377 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 119068 6839 VEHGSVALP True H1975_Epitope_Rep2 907.4763311916299 907.4752299358599 31.222 2 0.134099446030138 0.0013303769401330377 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.I452V|1|0.26|ENSG00000137076|chr9:35720149-35720149|T/C|missense_variant'] 26207 8145 FHTTPNTSL True PC9_epitope_Rep4 1016.49270953176 1016.49160993586 38.784 2 0.13409701358477852 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 110973 8487 TLDDESLKY True H1975_Epitope_Rep1 1082.5131701928199 1082.51257496793 37.576 1 0.13408635495721133 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 83732 10642 QEASEAYLV True H1975_Epitope_Rep3 1008.4763907612797 1008.47528993586 46.008 2 0.13407429738267698 0.0013303769401330377 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'H3C13|p.G103R|1|0.12|ENSG00000183598|chr1:149813375-149813375|C/G|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 21274 17424 ERINNINIL True PC9_epitope_Rep1 1097.61930702721 1097.61820993586 71.817 2 0.13407353910804393 0.0013303769401330377 0.9438714419765777 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 39852 8994 HQGPATTVAF True PC9_epitope_Rep6 1027.50869394907 1027.50758993586 44.618 2 0.1340729137471362 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 74222 13463 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 56.919 2 0.13405245467262283 0.0013303769401330377 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 9118 5159 AVLKPGAWSRK True NCI_RA007_Epitope_Rep4 1211.7138761183899 1211.71222490379 26.369 3 0.13404187208017604 0.0013303769401330377 0.9438714419765777 ['ENST00000308521.9_1_22:39436844-39436913:+|nuORF'] 129305 10975 VTDSGPTFNY True H1975_Epitope_Rep2 1099.4822044177101 1099.4816749679298 47.244 1 0.13403680815089694 0.0013303769401330377 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 84704 16045 QHFDTIYSI True PC9_epitope_Rep6 1122.53457434374 1122.53346993586 74.042 2 0.13401945255429643 0.0013303769401330377 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 73833 7789 NHDYSYTV True PC9_epitope_Rep4 997.4141248578901 997.41302993586 37.36 2 0.1340138469407706 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant'] 26769 18177 FLDPRPLTV True PC9_epitope_Rep2 1056.59678067748 1056.59568993586 75.223 2 0.1340136420419067 0.0013303769401330377 0.9438714419765777 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 71842 19542 MPFGNVVSA True PC9_epitope_Rep2 920.4425885351999 920.44203496793 80.551 1 0.13400932718785225 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 2457 9508 AEQNIIPSA True H1975_Epitope_Rep2 941.4818104948899 941.48070993586 41.542 2 0.13400706238060284 0.0013303769401330377 0.9438714419765777 ['ENSG00000183508|ENST00000369448|TENT5C'] 17729 7340 EHSTEGSVSL True PC9_epitope_Rep3 1044.47236801 1044.4712699358602 33.243 2 0.13400223550716067 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 10103 18304 AYVPGFAHI True PC9_epitope_Rep5 973.5021520166499 973.50104993586 75.421 2 0.13400103654565104 0.0013303769401330377 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 53278 19545 KTIEDTLMTV True PC9_epitope_Rep5 1149.59512599497 1149.5940299358601 80.232 2 0.13399844037991493 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 97598 17060 SHADVVNLL True PC9_epitope_Rep3 966.51344497634 966.51234993586 70.774 2 0.13399527586223078 0.0013303769401330377 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 34504 8398 GQDVGRYQV True PC9_epitope_Rep3 1020.49885754136 1020.49776993586 37.268 2 0.13399506224725882 0.0013303769401330377 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 89801 6640 RFEEKHAYF True PC9_epitope_Rep4 1225.5880068989297 1225.58635490379 32.708 3 0.13399363222173835 0.0013303769401330377 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 11986 7353 DHVTATQL True PC9_epitope_Rep1 883.4399456829101 883.43884993586 33.094 2 0.13398673975889439 0.0013303769401330377 0.9438714419765777 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant'] 103339 20466 SQVEEELFSV True PC9_epitope_Rep4 1165.55028397753 1165.54918993586 86.868 2 0.1339803295868783 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 96700 4002 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 20.52 2 0.13396768522031213 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 53303 9928 KTLTGKTITL True PC9_epitope_Rep3 1074.6648602373 1074.66376993586 43.145 2 0.13396630354614186 0.0013303769401330377 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 94484 15765 RYGSDFYSM True PC9_epitope_Rep5 1124.45969515132 1124.4585899358601 65.634 2 0.13396453449909487 0.0013303769401330377 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 35614 11626 GTLEQWIEK True NCI_RA007_Epitope_Rep4 1102.56587447202 1102.56476993586 51.672 2 0.13395753584350317 0.0013303769401330377 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 28320 11244 FRYTAGTPY True PC9_epitope_Rep4 1074.5134449763398 1074.5123499358601 51.024 2 0.1339471504774263 0.0013303769401330377 0.9438714419765777 ['ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 42905 8360 IFVGGIKEN True NCI_RA007_Epitope_Rep4 975.5389314481899 975.53782993586 38.97 2 0.1339441634778651 0.0013303769401330377 0.9438714419765777 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 116460 4972 TYAEKLHRL True PC9_epitope_Rep4 1129.62439240765 1129.6227449037901 25.731 3 0.1339421598678024 0.0013303769401330377 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 3955 14095 AHDVDPIEL True PC9_epitope_Rep4 1007.4923751785899 1007.49187496793 62.124 1 0.13392909849345 0.0013303769401330377 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 76089 11909 NRMPDQISV True PC9_epitope_Rep1 1058.51787873378 1058.51678993586 50.674 2 0.1339257449058981 0.0013303769401330377 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP1|p.W342Cfs*13|1|0.3|ENSG00000153317|chr8:130152790-130152790|C/-|frameshift_variant'] 140673 13626 YYPSTPGRYSI True PC9_epitope_Rep4 1302.6244519773 1302.62334993586 60.305 2 0.13392475936082518 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 28416 10574 FSDYLHPQY True H1975_Epitope_Rep3 1168.5189242796 1168.5178299358602 45.742 2 0.133924600711953 0.0013303769401330377 0.9438714419765777 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion'] 22459 5723 ETGVPIAGR True NCI_RA007_Epitope_Rep2 898.4872302284999 898.48612993586 26.878 2 0.13392278214123993 0.0013303769401330377 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 60221 12750 LIDEVIEDTRY True H1975_Epitope_Rep2 1364.6823607762399 1364.6812699358602 54.146 2 0.13390814299036818 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant'] 35132 7557 GRYAGEESL True PC9_epitope_Rep1 980.4563240230399 980.45522993586 33.886 2 0.13390642962807744 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1', 'nc|ENSG00000258436|Q7Z5J4-4|RAI1'] 86190 20388 QPTEVVNIL True PC9_epitope_Rep5 1011.5600608155898 1011.55896993586 83.458 2 0.13390638950255015 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1', 'PROSER1|p.V65L|1|0.12|ENSG00000120685|chr13:39029363-39029363|C/G|missense_variant', 'ENST00000602534.1_1_13:39603416-39611379:-|nuORF'] 44536 13436 IPAPPLSKV True PC9_epitope_Rep1 920.56950330048 920.56840993586 56.542 2 0.1339057561210551 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF'] 35619 8089 GTLIDNQFK True NCI_RA007_Epitope_Rep3 1034.53965972418 1034.53856993586 38.916 2 0.13390160908161391 0.0013303769401330377 0.9438714419765777 ['ENST00000469448.1_1_X:118673692-118676584:-|nuORF', 'nc|ENSG00000018610|Q9H5V9-2|STEEP1', 'nc|ENSG00000018610|Q9H5V9-3|STEEP1', 'ENSG00000018610|ENST00000644802|STEEP1'] 21559 18123 ERSDTFINL True PC9_epitope_Rep3 1093.54038800017 1093.53928993586 74.908 2 0.13390022145074626 0.0013303769401330377 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 33589 20403 GLLAVLRPL True PC9_epitope_Rep5 950.6276868829399 950.62658993586 83.517 2 0.13389883253705584 0.0013303769401330377 0.9438714419765777 ['ENSG00000168569|ENST00000307366|TMEM223'] 6135 13940 APNPIHLTV True PC9_epitope_Rep4 960.53926580136 960.53816993586 61.523 2 0.13389751333157893 0.0013303769401330377 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F', 'ENST00000530219.1_1_11:8014470-8016722:+|nuORF'] 106538 19535 SVVSQFITV True PC9_epitope_Rep6 978.5385970950199 978.53750993586 87.805 2 0.13389454664380424 0.0013303769401330377 0.9438714419765777 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1'] 125614 15252 VMDEEAYVLY True H1975_Epitope_Rep2 1230.54784144938 1230.5467499358601 63.824 2 0.1338919432743694 0.0013303769401330377 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1', 'ENST00000599949.1_1_19:48949262-48949505:+|nuORF'] 40841 11135 HVLEEVQQV True PC9_epitope_Rep2 1079.56112344475 1079.56002993586 48.156 2 0.13388958895356834 0.0013303769401330377 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 123391 11438 VIDEQTPLY True H1975_Epitope_Rep2 1076.5389910178399 1076.5378899358602 49.049 2 0.13388956908687444 0.0013303769401330377 0.9438714419765777 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'ENST00000500085.2_1_4:187509748-187518366:-|nuORF'] 35528 15338 GTIDEIQKL True PC9_epitope_Rep5 1015.5549754351499 1015.55386993586 64.008 2 0.13387935231723216 0.0013303769401330377 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1'] 76161 8469 NRSDPVTL True PC9_epitope_Rep5 900.46649478392 900.46538993586 37.519 2 0.1338767564414956 0.0013303769401330377 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 40140 11168 HRDSIVETL True PC9_epitope_Rep1 1068.5563724174801 1068.55526993586 47.843 2 0.13387499552400614 0.0013303769401330377 0.9438714419765777 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54579003-54603452:-|nuORF'] 136436 12198 YHGDSDLQL True PC9_epitope_Rep3 1046.4668887067398 1046.4657899358601 51.952 2 0.1338732058548281 0.0013303769401330377 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF'] 64603 12426 LREGDPVSL True PC9_epitope_Rep1 984.52400966004 984.52290993586 52.66 2 0.13386330349914674 0.0013303769401330377 0.9438714419765777 ['ENSG00000141499|ENST00000396463|WRAP53'] 25309 7080 FEELDRPAA True H1975_Epitope_Rep2 1046.50327421546 1046.5021699358601 32.164 2 0.13386209349102585 0.0013303769401330377 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 123089 18362 VHAPPMQLGF True PC9_epitope_Rep2 1095.5535359665098 1095.5524299358601 75.959 2 0.13386056519434744 0.0013303769401330377 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 86000 21024 QPILLELEA True PC9_epitope_Rep4 1024.580461907 1024.57987496793 89.031 1 0.13385760271470146 0.0013303769401330377 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 7459 14488 ASDMLQLEY True H1975_Epitope_Rep1 1068.4797618895598 1068.4786699358601 60.928 2 0.13385696401986333 0.0013303769401330377 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 64542 8554 LRDENVNVV True PC9_epitope_Rep2 1056.5563724174801 1056.55526993586 38.264 2 0.13384597175988724 0.0013303769401330377 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 74820 15496 NLPDEIYHV True PC9_epitope_Rep6 1098.5345743437401 1098.53346993586 71.784 2 0.13384503792183042 0.0013303769401330377 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 135455 5337 YEAPGVREA True H1975_Epitope_Rep3 990.4770594676198 990.47596993586 25.601 2 0.1338339253638053 0.0013303769401330377 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 32421 7377 GGGQIIPTAR True PC9_epitope_Rep2 968.5403284305199 968.53922993586 33.757 2 0.13383365721353893 0.0013303769401330377 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 140092 12804 YVPETVYRV True PC9_epitope_Rep4 1124.5866099165999 1124.58550993586 57.111 2 0.1338299677894945 0.0013303769401330377 0.9438714419765777 ['ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000082701|ENST00000264235|GSK3B', 'nc|ENSG00000082701|P49841-2|GSK3B'] 116650 20896 TYIPGTQITF True PC9_epitope_Rep4 1139.58627556343 1139.5851699358602 88.535 2 0.13382759684165071 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 21067 10127 ERDMSNVSL True PC9_epitope_Rep2 1049.48115887189 1049.48006993586 44.291 2 0.1338227042617762 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 70295 20821 LYPEGLAQL True PC9_epitope_Rep2 1002.5385970950199 1002.53750993586 85.532 2 0.13381927157001647 0.0013303769401330377 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 34595 13950 GQGQIYVHL True PC9_epitope_Rep2 1013.5294293936499 1013.52832993586 58.936 2 0.13381645145031454 0.0013303769401330377 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 53948 14980 KYITDWQNVF True NCI_RA007_Epitope_Rep4 1312.6451874218799 1312.6440899358602 65.086 2 0.13381299409948505 0.0013303769401330377 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 61883 18326 LLLGRLTGVAG True PC9_epitope_Rep4 1068.6655289436399 1068.6644299358602 78.559 2 0.13380189844609502 0.0013303769401330377 0.9438714419765777 ['ENST00000565775.1_1_20:1558831-1600590:-|nuORF', 'ENST00000381596.1_1_20:1586507-1600590:-|nuORF', 'nc|ENSG00000101307|O00241-2|SIRPB1', 'nc|ENSG00000101307|Q5TFQ8|SIRPB1', 'ENSG00000101307|ENST00000381605|SIRPB1'] 26813 17960 FLEETSLFY True H1975_Epitope_Rep2 1147.5437420451099 1147.54264993586 74.406 2 0.1337987501580611 0.0013303769401330377 0.9438714419765777 ['ENST00000568469.5_1_16:18995385-19051723:+|nuORF', 'ENSG00000170537|ENST00000304381|TMC7', 'nc|ENSG00000170537|Q7Z402-2|TMC7'] 9766 18368 AYLEAIHNF True PC9_epitope_Rep5 1076.52909504048 1076.52857496793 75.672 1 0.13379858000681 0.0013303769401330377 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 63722 8063 LPQSFQVDTSK True H1975_Epitope_Rep1 1248.6350166609998 1248.6339099358602 35.957 2 0.13379734692390077 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 109190 15922 TFSDVEAHF True PC9_epitope_Rep2 1051.46107505031 1051.45996993586 66.494 2 0.13379480878146052 0.0013303769401330377 0.9438714419765777 ['ENSG00000056277|ENST00000370978|ZNF280C'] 21089 8467 ERDPATYNI True PC9_epitope_Rep6 1077.5090878718902 1077.50798993586 42.274 2 0.13379211538648944 0.0013303769401330377 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 91639 6602 RPFQGTM[Oxidation]GV True PC9_epitope_Rep2 1007.4858507099498 1007.48474993586 30.807 2 0.1337905618088286 0.0013303769401330377 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 114358 13129 TSDELQFGY True H1975_Epitope_Rep3 1058.4556553167 1058.45507496793 55.748 1 0.13378884052905352 0.0013303769401330377 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 75986 10445 NRIANQVAI True PC9_epitope_Rep5 997.5668775315298 997.56578993586 45.164 2 0.1337872062546058 0.0013303769401330377 0.9438714419765777 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 64494 17739 LQWNGKEFTA True PC9_epitope_Rep3 1192.58767254576 1192.58656993586 73.43 2 0.13378708431215375 0.0013303769401330377 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 8335 7318 ATLQEALAH True NCI_RA007_Epitope_Rep3 952.4977949121999 952.49668993586 35.906 2 0.13378427349254476 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 98401 21772 SIIGRLLEV True PC9_epitope_Rep1 998.6124307416198 998.61132993586 88.579 2 0.1337815879525741 0.0013303769401330377 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 91294 12893 RLYGYFHDA True PC9_epitope_Rep5 1140.53524305008 1140.5335949037901 54.603 3 0.13378128826704414 0.0013303769401330377 0.9438714419765777 ['chr20:56390665-56392154|491|11.72|0.64|4.2|-|ENST00000441357|AURKA,AURKA', 'ENSG00000087586|ENST00000395915|AURKA'] 139236 10866 YTAEPVTL True H1975_Epitope_Rep1 892.45419876472 892.4536549679301 46.755 1 0.13377666303733166 0.0013303769401330377 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENST00000482611.5_1_10:103552686-103559078:-|nuORF', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 43475 21899 IHVDFPVIL True PC9_epitope_Rep5 1051.60661708519 1051.6055299358602 89.273 2 0.13377365805357347 0.0013303769401330377 0.9438714419765777 ['ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 137650 18370 YLYDLNHTL True PC9_epitope_Rep4 1150.5658744720201 1150.56476993586 78.726 2 0.1337724245496946 0.0013303769401330377 0.9438714419765777 ['ENSG00000110057|ENST00000227471|UNC93B1'] 95122 8019 RYVPRASYF True NCI_RA007_Epitope_Rep4 1157.5981776598098 1157.5970899358601 37.61 2 0.1337671891948335 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 54321 7004 KYQAVTATL True NCI_RA007_Epitope_Rep3 993.5494961318899 993.54838993586 34.66 2 0.13375685442954685 0.0013303769401330377 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'ENST00000478813.1_1_8:81177882-81177960:-|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 108216 9019 TEAEDMISA True H1975_Epitope_Rep2 965.4011772156899 965.4006249679301 39.643 1 0.13375676043105078 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B'] 114180 6507 TRTGSSFSV True PC9_epitope_Rep2 940.4614094034799 940.46030993586 30.442 2 0.1337548551258612 0.0013303769401330377 0.9438714419765777 ['ENSG00000101473|ENST00000217455|ACOT8', 'ENST00000484783.1_1_20:44472824-44485954:-|nuORF', 'ENST00000484975.5_1_20:44472824-44477348:-|nuORF', 'ENST00000493118.5_1_20:44472824-44485929:-|nuORF'] 72370 9471 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4684899358601 41.348 2 0.13375317440520268 0.0013303769401330377 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 109191 15223 TFSDVEAHF True PC9_epitope_Rep4 1051.46107505031 1051.45996993586 66.483 2 0.13375210158871642 0.0013303769401330377 0.9438714419765777 ['ENSG00000056277|ENST00000370978|ZNF280C'] 2259 6880 AEPAKIEAFR True PC9_epitope_Rep4 1130.6084079903399 1130.6067749037902 33.683 3 0.13375147692681721 0.0013303769401330377 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 91493 6622 RNVSTGDVNVE True PC9_epitope_Rep1 1188.5734790335998 1188.5723899358602 30.274 2 0.133750753494342 0.0013303769401330377 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 49423 15231 KILQELPSV True PC9_epitope_Rep6 1025.6120963884498 1025.61098993586 70.685 2 0.13375038292354385 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 26543 19161 FIVHTIEEI True PC9_epitope_Rep2 1099.5913609438699 1099.59026993586 79.076 2 0.13374979558965006 0.0013303769401330377 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 161 13530 AADPVSPLL True NCI_RA007_Epitope_Rep4 881.4858332461699 881.48528496793 59.251 1 0.13374622447973222 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 109595 12370 THDEAINVL True PC9_epitope_Rep2 1010.5032742154599 1010.50216993586 52.892 2 0.13374546427172387 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 127582 15015 VQYEGNINV True PC9_epitope_Rep1 1034.50327421546 1034.5021699358601 62.575 2 0.13374317827971305 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000166750|Q08AF3-2|SLFN5', 'SLFN5|p.A869Pfs*19|1|0.14|ENSG00000166750|chr17:35265814-35265814|G/-|frameshift_variant', 'ENSG00000166750|ENST00000299977|SLFN5'] 48001 8225 KAINQGGLTSV True PC9_epitope_Rep2 1086.6033226099 1086.6022299358601 36.995 2 0.13373261708318804 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 139100 10564 YSNKEIFL True H1975_Epitope_Rep2 1012.5229470308799 1012.5223749679301 45.656 1 0.13373110636593777 0.0013303769401330377 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 102047 8494 SPPPPPPPP True PC9_epitope_Rep1 881.4647038787699 881.46360993586 37.507 2 0.1337258318533718 0.0013303769401330377 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 17317 10713 EHDPQYAVI True PC9_epitope_Rep6 1070.50327421546 1070.5021699358601 52.019 2 0.13372059239106598 0.0013303769401330377 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 7864 3871 ATALPTGTSK True NCI_RA007_Epitope_Rep5 945.5131106231701 945.51200993586 21.148 2 0.13371737780866363 0.0013303769401330377 0.9438714419765777 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1'] 45093 6627 IQRTPKIQVYS True NCI_RA007_Epitope_Rep4 1331.75613485319 1331.7550299358602 32.119 2 0.1337170191420779 0.0013303769401330377 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 115594 14660 TVIENIHTI True PC9_epitope_Rep1 1038.57095985246 1038.5698699358602 61.211 2 0.13371520106479695 0.0013303769401330377 0.9438714419765777 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.M899Nfs*19|2|0.32|ENSG00000162402|chr1:55141670-55141671|-/T|frameshift_variant'] 75828 14806 NRDGNIVFV True PC9_epitope_Rep5 1032.5352430500798 1032.5341499358601 61.951 2 0.1337098769761791 0.0013303769401330377 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'NCOA3|p.K620Nfs*18|1|0.15|ENSG00000124151|chr20:47636241-47636241|A/-|frameshift_variant', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 17297 17695 EHDLLQAAL True PC9_epitope_Rep2 1008.5240096600398 1008.52290993586 73.344 2 0.13370798119902266 0.0013303769401330377 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 124566 5228 VLGPTPVQK True NCI_RA007_Epitope_Rep4 937.55966689277 937.55856993586 26.647 2 0.13370019778977632 0.0013303769401330377 0.9438714419765777 ['ENSG00000166225|ENST00000549921|FRS2'] 1002 8505 AEAEPEPELA True H1975_Epitope_Rep3 1054.4818700645399 1054.48076993586 37.7 2 0.13369952804590393 0.0013303769401330377 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion'] 2800 4975 AEVEHVVNA True H1975_Epitope_Rep2 966.4770594676199 966.47596993586 24.219 2 0.13369449240431355 0.0013303769401330377 0.9438714419765777 ['ENST00000577286.5_1_17:79993838-79994415:-|nuORF', 'ENST00000579842.5_1_17:79993838-79994531:-|nuORF', 'ENSG00000169738|ENST00000306869|DCXR'] 41976 6515 IEDFRQATA True H1975_Epitope_Rep2 1049.51417325233 1049.5130699358601 29.973 2 0.1336820942788522 0.0013303769401330377 0.9438714419765777 ['ENSG00000167264|ENST00000565263|DUS2'] 84005 6518 QENGHIYVC True H1975_Epitope_Rep2 1061.46002950449 1061.4589299358602 29.985 2 0.13367178662701623 0.0013303769401330377 0.9438714419765777 ['ENSG00000124275|ENST00000440940|MTRR', 'nc|ENSG00000124275|Q9UBK8-1|MTRR', 'MTRR-NMD3|1|fusion', 'MTRR-NMD3|2|fusion'] 73267 5240 NEIKDSVVA True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 25.219 2 0.13367108273093314 0.0013303769401330377 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 138548 13588 YRMDGHIQL True PC9_epitope_Rep5 1131.5495132152298 1131.54840993586 57.289 2 0.13366257719407182 0.0013303769401330377 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 21836 11598 ESDVGVVVY True H1975_Epitope_Rep3 965.47057710485 965.47002496793 49.743 1 0.13365997359982726 0.0013303769401330377 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 61592 18361 LLGPRLVLA True PC9_epitope_Rep4 950.6276868829399 950.62658993586 78.692 2 0.13365908831749743 0.0013303769401330377 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 29302 16611 FVDPNGKISL True PC9_epitope_Rep1 1088.5866099165999 1088.58550993586 68.72 2 0.1336575876166381 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 103350 13210 SQVEILQRV True PC9_epitope_Rep4 1070.6084079903399 1070.60730993586 58.71 2 0.13364158487408592 0.0013303769401330377 0.9438714419765777 ['ENSG00000117318|ENST00000374561|ID3'] 83685 10506 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 45.429 2 0.13363972010852565 0.0013303769401330377 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 57733 9055 LENLVNQAA True H1975_Epitope_Rep3 970.5083595959 970.50726993586 39.815 2 0.13363942101192056 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 108522 5218 TEFPSKQV True H1975_Epitope_Rep2 934.4759968384598 934.47488993586 25.139 2 0.1336377658944629 0.0013303769401330377 0.9438714419765777 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 95979 12136 SEAEIFYNA True H1975_Epitope_Rep1 1042.46074069714 1042.46017496793 51.698 1 0.13363735888027883 0.0013303769401330377 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 7848 7178 ATAIGMPVEK True NCI_RA007_Epitope_Rep4 1015.5372171960299 1015.5361099358599 34.233 2 0.13363670878059553 0.0013303769401330377 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 39964 12646 HQQSIPAVL True PC9_epitope_Rep2 991.5450794577898 991.5445349679301 53.951 1 0.133634114728903 0.0013303769401330377 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 126842 13912 VPTANVSVVDL True H1975_Epitope_Rep1 1112.607739284 1112.60717496793 58.665 1 0.13363318062822835 0.0013303769401330377 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 9495 10382 AWAPKPYHKF True PC9_epitope_Rep3 1243.6502132326698 1243.64857490379 44.877 3 0.13362516136370087 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 41046 16413 HYILHNSFF True PC9_epitope_Rep4 1176.5716285587998 1176.5705299358601 71.095 2 0.13362339416118968 0.0013303769401330377 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 8214 4233 ATIDGSVNPK True NCI_RA007_Epitope_Rep4 1000.5189242796 1000.51782993586 22.598 2 0.13362237213802428 0.0013303769401330377 0.9438714419765777 ['ENSG00000116830|ENST00000369466|TTF2', 'ENST00000463696.1_1_1:117637951-117640053:+|nuORF', 'ENST00000492682.5_1_1:117635418-117640830:+|nuORF'] 106075 19334 SVLVSVSEV True PC9_epitope_Rep5 917.50696261357 917.50641496793 79.412 1 0.13362108758980754 0.0013303769401330377 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 102855 10923 SQHGVIIQL True NCI_RA007_Epitope_Rep1 993.5607295219299 993.55962993586 46.481 2 0.13361392929988652 0.0013303769401330377 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 32595 9319 GHDASQITL True PC9_epitope_Rep2 940.46140940348 940.46030993586 41.183 2 0.1336135024560527 0.0013303769401330377 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 118568 4937 VEAAAELSAK True H1975_Epitope_Rep3 987.5236753068699 987.52256993586 24.118 2 0.13359222583603614 0.0013303769401330377 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 86002 21921 QPILLELEA True PC9_epitope_Rep5 1024.580461907 1024.57987496793 89.361 1 0.13358732527241526 0.0013303769401330377 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 26185 9891 FHSGDDSQVL True PC9_epitope_Rep1 1103.48835242731 1103.48724993586 42.904 2 0.13358408804477842 0.0013303769401330377 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3'] 17298 18336 EHDLLQAAL True PC9_epitope_Rep5 1008.5240096600398 1008.52290993586 75.544 2 0.13358296795062852 0.0013303769401330377 0.9438714419765777 ['ENSG00000135686|ENST00000564996|KLHL36', 'nc|ENSG00000135686|Q8N4N3-2|KLHL36'] 86945 19989 QRTFVLEVM True PC9_epitope_Rep1 1121.5903153980498 1121.58920993586 81.712 2 0.13358080271542253 0.0013303769401330377 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP', 'ENST00000466134.5_1_21:45719988-45734072:+|nuORF', 'nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF'] 95968 9762 SEADIRGFVA True NCI_RA007_Epitope_Rep4 1063.52982331647 1063.5287299358602 44.398 2 0.1335785456220017 0.0013303769401330377 0.9438714419765777 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 77292 18833 NYIVPDKQIF True PC9_epitope_Rep2 1235.6550238295897 1235.65392993586 77.81 2 0.133570876020134 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 42143 6860 IEESGEHIIA True H1975_Epitope_Rep1 1096.540053647 1096.53894993586 31.431 2 0.13356553056819717 0.0013303769401330377 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 46254 5599 ITDTTRDVY True H1975_Epitope_Rep3 1082.52440358286 1082.5233099358602 26.576 2 0.13354647635386313 0.0013303769401330377 0.9438714419765777 ['ENSG00000161904|ENST00000293760|LEMD2'] 67156 13100 LTDEQLLY True H1975_Epitope_Rep2 993.50187723313 993.50078993586 55.514 2 0.13354546625807326 0.0013303769401330377 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R'] 29473 22889 FVIDGFDEL True PC9_epitope_Rep5 1053.50187723313 1053.50137496793 93.042 1 0.13354314590625246 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 31570 10287 GEFSITYKP True H1975_Epitope_Rep2 1040.5178616504397 1040.51676993586 44.576 2 0.13354266827163178 0.0013303769401330377 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 139964 11682 YVINVTTHL True H1975_Epitope_Rep2 1058.5760452329 1058.57494993586 50.007 2 0.13354032464543586 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000143507|Q9Y6W6-2|DUSP10', 'ENST00000468085.5_1_1:221875756-221910233:-|nuORF', 'ENSG00000143507|ENST00000366899|DUSP10'] 101109 23101 SLVELLNQI True PC9_epitope_Rep2 1027.5913609438699 1027.59026993586 94.348 2 0.13353911775637178 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 63935 14876 LPWQGLKAA True PC9_epitope_Rep4 982.5600012459398 982.55890993586 65.158 2 0.13352665774636305 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 104919 6356 STFSAPLNK True NCI_RA007_Epitope_Rep5 963.50254593947 963.50144993586 31.124 2 0.13352466128530316 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 85325 16054 QLAQFVHEV True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 66.904 2 0.13352363930756478 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'ENST00000539757.1_1_12:9440801-9462940:+|nuORF', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'ENST00000542244.5_1_12:31237807-31242486:+|nuORF', 'ENST00000535158.5_1_12:31227017-31242187:+|nuORF', 'ENST00000536265.5_1_12:31227017-31242486:+|nuORF', 'ENST00000543026.5_1_12:31240692-31242187:+|nuORF', 'ENST00000542242.1_1_12:31240692-31242486:+|nuORF'] 7293 7425 ARPSSTITY True PC9_epitope_Rep1 994.5083595959 994.50726993586 33.376 2 0.13351788422560765 0.0013303769401330377 0.9438714419765777 ['ENSG00000159596|ENST00000372025|TMEM69'] 5067 21118 ALLNILSEV True PC9_epitope_Rep6 970.5698972233 970.56880993586 94.069 2 0.1335171487739124 0.0013303769401330377 0.9438714419765777 ['ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-2|UBA6'] 32119 6166 GEYLGQKVA True NCI_RA007_Epitope_Rep4 963.5025459394698 963.50144993586 30.328 2 0.13351507111208882 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000007264|P42679-3|MATK', 'ENSG00000007264|ENST00000310132|MATK', 'nc|ENSG00000007264|P42679-2|MATK'] 118995 16540 VEFLEPLEA True H1975_Epitope_Rep2 1045.5331773614098 1045.53208993586 68.846 2 0.13351053669990762 0.0013303769401330377 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 77017 18312 NVVDVFHAV True PC9_epitope_Rep4 998.51853035678 998.51742993586 78.505 2 0.13350623255379104 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 49481 11799 KIYEGQVEV True PC9_epitope_Rep3 1063.55497543515 1063.5538699358601 50.4 2 0.1335034025495752 0.0013303769401330377 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 70104 15065 LYIVEPLKF True NCI_RA007_Epitope_Rep3 1120.6532329244399 1120.65212993586 66.733 2 0.13349875801763839 0.0013303769401330377 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 48926 7758 KEYAVNEVV True H1975_Epitope_Rep3 1049.53932537101 1049.53822993586 34.825 2 0.13349409787482316 0.0013303769401330377 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 15239 5166 EAGEQGDIEPR True PC9_epitope_Rep1 1199.5418445521498 1199.54074993586 24.724 2 0.1334721452922983 0.0013303769401330377 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 432 16849 AALPVNVKI True PC9_epitope_Rep5 923.5804023373499 923.57930993586 69.819 2 0.13347040827301948 0.0013303769401330377 0.9438714419765777 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 104332 13304 SSEQTFMYY True H1975_Epitope_Rep2 1154.4590264449798 1154.45847496793 56.303 1 0.13346762559257683 0.0013303769401330377 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 7949 6942 ATDINGDDY True H1975_Epitope_Rep2 982.3879696796998 982.38686993586 31.622 2 0.13346433180978773 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 89689 8516 REWTPMVSS True NCI_RA007_Epitope_Rep3 1091.5069796969099 1091.50588993586 40.57 2 0.13346383780818036 0.0013303769401330377 0.9438714419765777 ['ENST00000465222.1_1_3:186501403-186502270:+|nuORF', 'ENST00000485101.5_1_3:186501406-186502392:+|nuORF', 'ENST00000443963.5_1_3:186501406-186502392:+|nuORF'] 8037 10504 ATDVNDALGY True H1975_Epitope_Rep2 1037.4665543535698 1037.46597496793 45.422 1 0.13346199560864935 0.0013303769401330377 0.9438714419765777 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 70931 15038 MELITPISA True H1975_Epitope_Rep3 973.5154191222899 973.51432993586 63.237 2 0.1334582044450877 0.0013303769401330377 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 75674 16438 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53911496793 68.47 1 0.13345741413779544 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 127478 6734 VQTEVNREL True PC9_epitope_Rep4 1086.56693710118 1086.5658499358601 33.093 2 0.13344724682697534 0.0013303769401330377 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 40820 15691 HVLDDFVKV True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 68.282 2 0.1334357091002042 0.0013303769401330377 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 9808 11652 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 52.579 2 0.1334315215441971 0.0013303769401330377 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 8270 4216 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 22.753 2 0.13342705687113462 0.0013303769401330377 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 70441 14324 LYRLQFNEF True NCI_RA007_Epitope_Rep4 1228.6240580544797 1228.62296993586 62.403 2 0.1334269308327991 0.0013303769401330377 0.9438714419765777 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 57841 6389 LEQAVEHIA True H1975_Epitope_Rep2 1008.52400966004 1008.52290993586 29.499 2 0.13342593669669875 0.0013303769401330377 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 43499 7601 IIALDGDTK True NCI_RA007_Epitope_Rep1 944.51786165044 944.51676993586 33.559 2 0.13341753963684846 0.0013303769401330377 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 105298 16174 STTPYLQSV True PC9_epitope_Rep1 994.4971262058599 994.49602993586 67.028 2 0.13341382666645582 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000136108|Q8WWK9-6|CKAP2', 'ENSG00000136108|ENST00000258607|CKAP2', 'nc|ENSG00000136108|Q8WWK9|CKAP2'] 94688 12973 RYLEKPMEI True PC9_epitope_Rep5 1177.6165301458898 1177.6154299358602 54.91 2 0.13340985303680894 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 89853 20742 RFLNDPGHLLW True PC9_epitope_Rep1 1366.7146043943799 1366.7135099358602 84.612 2 0.13339238760293948 0.0013303769401330377 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'nc|ENSG00000241370|Q9H633-3|RPP21'] 60119 19831 LHVGDAILAV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 81.326 2 0.1333822065759503 0.0013303769401330377 0.9438714419765777 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC'] 53949 15177 KYITDWQNVF True NCI_RA007_Epitope_Rep5 1312.6451874218799 1312.6440899358602 65.062 2 0.1333814720869063 0.0013303769401330377 0.9438714419765777 ['ENST00000505526.1_1_5:271863-311637:+|nuORF', 'nc|ENSG00000249915|O75340-2|PDCD6', 'ENSG00000249915|ENST00000264933|PDCD6'] 42054 6775 IEEDKWRVA True H1975_Epitope_Rep2 1144.5876725457601 1144.58602490379 30.975 3 0.1333809909806851 0.0013303769401330377 0.9438714419765777 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'STARD4|p.K141Rfs*29|1|0.29|ENSG00000164211|chr5:111500082-111500082|T/-|frameshift_variant', 'ENSG00000164211|ENST00000296632|STARD4'] 136815 16564 YITERIIAV True PC9_epitope_Rep4 1076.62299542532 1076.62188993586 71.688 2 0.13337549598389575 0.0013303769401330377 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 48373 8899 KEAIETIVAA True H1975_Epitope_Rep1 1043.5862755634298 1043.5851699358602 39.134 2 0.1333742272777028 0.0013303769401330377 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 43425 12603 IHSPVVNEL True PC9_epitope_Rep2 1006.54474510462 1006.54364993586 53.786 2 0.13337417571864643 0.0013303769401330377 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 119710 13232 VETFAFQA True H1975_Epitope_Rep2 911.4388830537499 911.43833496793 56.025 1 0.13337208079002497 0.0013303769401330377 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 132705 20404 VYSEVAAYEF True PC9_epitope_Rep2 1176.5339056373998 1176.53280993586 83.909 2 0.13336682707586545 0.0013303769401330377 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 26749 21046 FLDGNEMTL True PC9_epitope_Rep3 1038.46919720586 1038.46808993586 86.232 2 0.13336423519033513 0.0013303769401330377 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 105201 8348 STPLAGLAPK True NCI_RA007_Epitope_Rep5 953.55458151233 953.55348993586 38.783 2 0.13336045668861993 0.0013303769401330377 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 48434 6932 KEEEAGGFIA True H1975_Epitope_Rep2 1049.5029398622898 1049.50184993586 31.585 2 0.13335211003653913 0.0013303769401330377 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 54239 22007 KYPENFFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 89.948 2 0.13335179258753274 0.0013303769401330377 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 13993 5762 DRSKSYEL True PC9_epitope_Rep1 996.4876241513199 996.48652993586 26.98 2 0.13335159232342575 0.0013303769401330377 0.9438714419765777 ['ENSG00000100605|ENST00000267615|ITPK1', 'nc|ENSG00000100605|Q13572-2|ITPK1'] 104190 15484 SSDFDPLVY True H1975_Epitope_Rep1 1041.46549172441 1041.46497496793 64.831 1 0.13334799720208448 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000108375|Q68DV7-3|RNF43', 'nc|ENSG00000108375|Q68DV7-2|RNF43', 'ENSG00000108375|ENST00000407977|RNF43', 'nc|ENSG00000108375|Q68DV7-4|RNF43'] 97459 10151 SGHLETVIL True H1975_Epitope_Rep1 967.5338460677499 967.53274993586 43.985 2 0.13333977806781674 0.0013303769401330377 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 124283 11166 VLDELTLAR True NCI_RA007_Epitope_Rep1 1028.5866099165999 1028.58550993586 47.432 2 0.1333302521336896 0.0013303769401330377 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'nc|ENSG00000171346|P19012-2|KRT15', 'ENST00000474031.5_1_17:39671722-39674667:-|nuORF', 'ENST00000417510.5_1_17:16723272-16723344:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__P19001', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF', 'CON__Q6IFX2', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 102863 15020 SQHGVIIQL True PC9_epitope_Rep2 993.5607295219299 993.55962993586 63.028 2 0.13332049860233142 0.0013303769401330377 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 117149 11918 TYSPALNKM[Oxidation]F True PC9_epitope_Rep4 1186.5692459807399 1186.5681499358602 53.624 2 0.1333158571313194 0.0013303769401330377 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 75897 5656 NRDRTQIAL True PC9_epitope_Rep2 1085.59415490853 1085.59304993586 27.142 2 0.13330335528568 0.0013303769401330377 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 34914 5041 GQVVTKTAL True NCI_RA007_Epitope_Rep5 915.5389314481899 915.53782993586 26.091 2 0.13329087784482677 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 48813 5101 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 24.703 2 0.13328323416190216 0.0013303769401330377 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 73902 10761 NHHMQSISF True PC9_epitope_Rep3 1099.4869129586702 1099.48580993586 46.347 2 0.13327969347883797 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 113397 17819 TQLGPPYHILV True PC9_epitope_Rep6 1236.68665831104 1236.68556993586 81.172 2 0.13326390060807472 0.0013303769401330377 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 21640 10692 ERTNIQVTV True PC9_epitope_Rep3 1058.57202248162 1058.57092993586 46.074 2 0.13325732295811973 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 73366 7264 NEQGSYVVA True H1975_Epitope_Rep2 965.4454249861698 965.44432993586 32.877 2 0.13325676979200066 0.0013303769401330377 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 1253 7693 AEDPETQVV True H1975_Epitope_Rep2 986.4556553166999 986.4551049679301 34.544 1 0.1332563717218277 0.0013303769401330377 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 94466 10187 RYGLVTNEI True NCI_RA007_Epitope_Rep1 1063.56620882519 1063.5651099358602 43.636 2 0.13325319954257575 0.0013303769401330377 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 9560 21098 AYANIISQF True PC9_epitope_Rep2 1025.5181960036098 1025.5170899358602 86.612 2 0.13324845378696282 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 109888 12368 THNIIVNQL True PC9_epitope_Rep4 1050.5821932425 1050.58108993586 55.38 2 0.13324360398437962 0.0013303769401330377 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 107711 16165 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.5744349679301 70.12 1 0.13324216658467866 0.0013303769401330377 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 91483 4891 RNVSTGDVNV True NCI_RA007_Epitope_Rep3 1059.53088594563 1059.5297899358602 26.227 2 0.1332405010383641 0.0013303769401330377 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 115918 14120 TVPKPDVVVQV True PC9_epitope_Rep4 1179.68632395787 1179.6852299358602 62.218 2 0.13323143709634175 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 107421 5345 SYTSGPGSRI True NCI_RA007_Epitope_Rep5 1023.49852318819 1023.4974299358599 27.251 2 0.13323133053371106 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 131974 19994 VYGFLRNGF True PC9_epitope_Rep3 1071.5501648382299 1071.5490699358602 82.152 2 0.1332212668992807 0.0013303769401330377 0.9438714419765777 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 113268 12178 TQFGGKRPFGV True PC9_epitope_Rep1 1192.63529144452 1192.6336349037902 51.701 3 0.13322093739548005 0.0013303769401330377 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 139249 9568 YTDAALNY True H1975_Epitope_Rep1 929.41306222873 929.4125149679301 41.726 1 0.13322049175488088 0.0013303769401330377 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000497425.1_1_2:166736340-166740450:-|nuORF'] 86734 7934 QRLAEPSQL True PC9_epitope_Rep6 1040.56145779792 1040.56036993586 39.961 2 0.13321391315901462 0.0013303769401330377 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 64714 10203 LRNDSYTL True PC9_epitope_Rep5 980.4927095317599 980.49160993586 44.235 2 0.13321361434889206 0.0013303769401330377 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF', 'ENST00000496846.1_1_7:30411448-30411829:+|nuORF', 'ENST00000581764.1_1_17:61907522-61908306:+|nuORF'] 91769 10793 RPKPSSSPVIF True PC9_epitope_Rep5 1213.68190728377 1213.68025490379 46.505 3 0.1332060320844748 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 48548 2748 KEGKPPISV True H1975_Epitope_Rep2 953.5545815123298 953.55348993586 14.603 2 0.1332030472357473 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 138423 11779 YRDPYTGQSV True PC9_epitope_Rep5 1184.5462016566 1184.5451099358602 50.306 2 0.1332025477509357 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 40014 19634 HQTIVVQLL True PC9_epitope_Rep1 1049.62332977849 1049.62222993586 80.347 2 0.13320233680289267 0.0013303769401330377 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 123246 19227 VHNLLLTYL True PC9_epitope_Rep6 1084.62808080576 1084.6269899358601 86.608 2 0.13319242145167814 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1'] 138826 8574 YSDKYGLGY True H1975_Epitope_Rep1 1064.48147614172 1064.48097496793 37.906 1 0.13318597411703006 0.0013303769401330377 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 29221 16639 FVDDYTVRV True PC9_epitope_Rep3 1112.55022440788 1112.54912993586 69.137 2 0.13318426685204823 0.0013303769401330377 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 24761 13894 FAYDGKDYLTL True NCI_RA007_Epitope_Rep3 1304.6288686513997 1304.6277699358602 61.971 2 0.13318221771026065 0.0013303769401330377 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 53810 16028 KYFLWVVKF True NCI_RA007_Epitope_Rep1 1228.7008518231999 1228.6997499358602 66.449 2 0.13317456604613567 0.0013303769401330377 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 87301 22182 QSVDLVFPV True PC9_epitope_Rep5 1002.5385970950199 1002.53750993586 90.351 2 0.13316675501350103 0.0013303769401330377 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 127519 20921 VQVEDIVFL True PC9_epitope_Rep6 1060.580461907 1060.57936993586 93.247 2 0.13316125508822355 0.0013303769401330377 0.9438714419765777 ['ENSG00000197780|ENST00000338366|TAF13'] 130682 14626 VVDEIFNEY True H1975_Epitope_Rep2 1126.51825557326 1126.51767496793 61.418 1 0.1331498927139911 0.0013303769401330377 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 84675 19278 QHFDPVIQL True PC9_epitope_Rep2 1095.5712942056298 1095.57018993586 79.526 2 0.133148643213504 0.0013303769401330377 0.9438714419765777 ['ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 126523 17154 VPNPYIISA True PC9_epitope_Rep6 972.5280324113199 972.52692993586 78.568 2 0.13314777351767976 0.0013303769401330377 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 54717 9614 LAELEEALQK True H1975_Epitope_Rep1 1142.6183039677 1142.61720993586 41.906 2 0.13314512592679784 0.0013303769401330377 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF'] 86236 16129 QPYMPTVSA True PC9_epitope_Rep3 992.4637179025999 992.4631649679301 67.188 1 0.13314421901946996 0.0013303769401330377 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 112925 22783 TPQSIFIFA True PC9_epitope_Rep5 1022.5436824754598 1022.5425899358601 92.627 2 0.1331317458129657 0.0013303769401330377 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 139179 7847 YSSSYTESY True H1975_Epitope_Rep1 1085.41893545481 1085.41837496793 35.135 1 0.1331316435961565 0.0013303769401330377 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 108250 10761 TEAPIAVVT True H1975_Epitope_Rep2 899.4963979298699 899.4958449679301 46.422 1 0.13312841527852012 0.0013303769401330377 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 1683 9899 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 43.066 1 0.13312681728551082 0.0013303769401330377 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 24012 18779 EYPELRGVF True PC9_epitope_Rep4 1108.5553097883198 1108.5542099358602 80.317 2 0.13312667924314964 0.0013303769401330377 0.9438714419765777 ['ENST00000409011.5_2_2:39005336-39005417:+|nuORF'] 139822 5885 YVDGVEVH True NCI_RA007_Epitope_Rep4 916.42904664604 916.4279499358599 29.26 2 0.13312493186291263 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 129828 21044 VTLGPVPEI True PC9_epitope_Rep1 923.53278343859 923.53168993586 85.776 2 0.13311803144314893 0.0013303769401330377 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 1193 5831 AEDDRHYNIP True H1975_Epitope_Rep2 1228.54726428576 1228.54561490379 27.42 3 0.13310896888280518 0.0013303769401330377 0.9438714419765777 ['ENSG00000154124|ENST00000284274|OTULIN'] 3257 4918 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 26.476 2 0.13310621649101415 0.0013303769401330377 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 26085 17129 FHEGDVITL True PC9_epitope_Rep2 1029.51311062317 1029.51200993586 71.136 2 0.1330944792665731 0.0013303769401330377 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 49326 9808 KIDEHHFVAV True PC9_epitope_Rep1 1193.6193070272102 1193.61766490379 42.589 3 0.1330846093563981 0.0013303769401330377 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 31283 15045 GDSVIVVLR True PC9_epitope_Rep5 956.5654805492 956.56438993586 62.874 2 0.133083490434645 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 114333 15394 TSDDPWLTAY True H1975_Epitope_Rep3 1167.5084191655499 1167.5078749679299 64.623 1 0.13307733952065248 0.0013303769401330377 0.9438714419765777 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 140902 21284 YYVGGEIVTI True PC9_epitope_Rep5 1112.57537652656 1112.57426993586 86.922 2 0.13307468938445546 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 39939 13314 HQNQLLSSL True PC9_epitope_Rep4 1038.5458077337798 1038.54470993586 59.108 2 0.13305166932307547 0.0013303769401330377 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 640 7830 AATGGGIVRV True PC9_epitope_Rep2 899.51886470995 899.51776993586 35.488 2 0.1330485999978464 0.0013303769401330377 0.9438714419765777 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000561993.5_1_16:8732964-8736423:+|nuORF'] 48911 9204 KEVFLAQPV True NCI_RA007_Epitope_Rep3 1029.5858816406096 1029.58478993586 43.298 2 0.13304014071689996 0.0013303769401330377 0.9438714419765777 ['ENST00000376007.8_1_6:31588511-31590634:+|nuORF'] 129422 13425 VTEIMSMGY True H1975_Epitope_Rep3 1029.45110461357 1029.45057496793 56.909 1 0.13302618416506906 0.0013303769401330377 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 74080 11099 NHVASDISL True PC9_epitope_Rep1 954.47705946762 954.47596993586 47.579 2 0.13302488604240892 0.0013303769401330377 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 17462 19245 EHGNFLITV True PC9_epitope_Rep3 1028.52909504048 1028.52857496793 79.246 1 0.13302401470122568 0.0013303769401330377 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 44851 18629 IPYHIVNIV True PC9_epitope_Rep4 1066.6175161220601 1066.61640993586 79.735 2 0.13302371018742043 0.0013303769401330377 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 42849 16675 IFNPVSKNF True PC9_epitope_Rep1 1064.5654805492002 1064.5643899358602 68.969 2 0.13302341041794055 0.0013303769401330377 0.9438714419765777 ['ENST00000589391.5_1_2:179401165-179403504:+|nuORF', 'ENST00000415561.1_1_2:179402212-179403504:+|nuORF', 'ENST00000588244.5_1_2:179402120-179403504:+|nuORF', 'ENST00000419746.5_1_2:179402219-179403504:+|nuORF', 'ENST00000589434.5_1_2:179388144-179403504:+|nuORF'] 138424 9705 YRDPYTGQSV True PC9_epitope_Rep6 1184.5462016566 1184.5451099358602 47.725 2 0.1330170590767256 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 109617 14990 THDGSILIV True PC9_epitope_Rep2 953.51819600361 953.5176449679301 62.915 1 0.1330149412528716 0.0013303769401330377 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 72099 18191 MRDPIRILV True PC9_epitope_Rep5 1111.65358436095 1111.65248993586 74.981 2 0.133006639015023 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 138217 16069 YQTEIGQTL True PC9_epitope_Rep1 1051.51858992643 1051.51748993586 66.625 2 0.13300626918477232 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 72130 15392 MRENQITISL True PC9_epitope_Rep6 1203.6281574587497 1203.6270699358602 71.355 2 0.1330059626024663 0.0013303769401330377 0.9438714419765777 ['ENST00000264779.6_1_5:56531811-56531844:+|nuORF'] 84118 18075 QEQLLAILP True H1975_Epitope_Rep2 1023.5964463243098 1023.59587496793 74.89 1 0.1330043687194173 0.0013303769401330377 0.9438714419765777 ['ENSG00000171222|ENST00000305978|SCAND1'] 135493 10986 YEDGNVQLV True H1975_Epitope_Rep2 1035.4872897981497 1035.48677496793 47.284 1 0.13299114416730373 0.0013303769401330377 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 53458 17618 KVIDYVPGI True PC9_epitope_Rep4 1002.5749826037398 1002.57388993586 75.79 2 0.13298605377905712 0.0013303769401330377 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 139057 17645 YSLDHISSL True PC9_epitope_Rep1 1033.5080252427301 1033.5069299358602 72.664 2 0.13298112100215623 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 140682 7466 YYPTEDVPR True NCI_RA007_Epitope_Rep5 1138.5294889632999 1138.52838993586 35.4 2 0.1329783882304397 0.0013303769401330377 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 113131 12183 TQAPGNPVL True PC9_epitope_Rep5 895.4763311916299 895.47578496793 51.851 1 0.132977925941994 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 103419 17728 SQYGEIVNI True PC9_epitope_Rep6 1021.5080252427299 1021.50692993586 80.824 2 0.13297661576473194 0.0013303769401330377 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 137128 16057 YLDIGQVYY True H1975_Epitope_Rep2 1132.54407639828 1132.5429699358601 66.965 2 0.13297641520472855 0.0013303769401330377 0.9438714419765777 ['ENSG00000006555|ENST00000371276|TTC22'] 34496 8298 GQDVGRYQV True PC9_epitope_Rep1 1020.49885754136 1020.49776993586 36.752 2 0.13296918230513843 0.0013303769401330377 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 73570 20288 NFTNVAATF True PC9_epitope_Rep1 983.4712458111899 983.47014993586 82.864 2 0.13296540685493297 0.0013303769401330377 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 27060 22112 FLPDPSALQNL True PC9_epitope_Rep1 1213.6342883850098 1213.6331899358602 89.867 2 0.13296535802679854 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 132238 11855 VYKTIMEQF True NCI_RA007_Epitope_Rep4 1157.57908200801 1157.5779899358602 52.58 2 0.13296486319933568 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 87798 16339 QVIEKFEAL True PC9_epitope_Rep2 1075.5913609438699 1075.59026993586 68.094 2 0.1329647987533626 0.0013303769401330377 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 88515 9745 RADDTFEAL True NCI_RA007_Epitope_Rep5 1036.48253877088 1036.4814499358602 44.123 2 0.13295325057081486 0.0013303769401330377 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 43928 7222 ILEGELER True H1975_Epitope_Rep1 957.5131106231698 957.51200993586 32.79 2 0.1329480097917197 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'TPM2|p.E180K|1|0.36|ENSG00000198467|chr9:35685294-35685294|C/T|missense_variant', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 109770 13884 THISDTSVVL True PC9_epitope_Rep3 1070.56078909158 1070.5596899358602 58.485 2 0.13294166058471488 0.0013303769401330377 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 104126 19088 SRYPDQWIV True PC9_epitope_Rep5 1162.57710786206 1162.5760099358602 78.452 2 0.13291929981250666 0.0013303769401330377 0.9438714419765777 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 130442 16908 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 70.28 2 0.132918906059967 0.0013303769401330377 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 117399 9534 VADGYPVRL True H1975_Epitope_Rep3 988.5341804209199 988.53308993586 41.68 2 0.13291723484451753 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 24112 4865 EYSKQMQRF True NCI_RA007_Epitope_Rep3 1215.57064258263 1215.56899490379 26.122 3 0.13291306651188592 0.0013303769401330377 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 88854 2732 REAEFTKSIA True H1975_Epitope_Rep2 1150.59823722946 1150.5971499358602 14.576 2 0.1329040844130623 0.0013303769401330377 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 125902 4743 VNTLIRPDGEK True NCI_RA007_Epitope_Rep5 1240.6775501793197 1240.67590490379 24.927 3 0.1329026970900911 0.0013303769401330377 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF'] 123418 11747 VIDSAELQAY True H1975_Epitope_Rep2 1107.54480467427 1107.54427496793 50.26 1 0.13289554905897827 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 54098 14055 KYMDVQFDF True NCI_RA007_Epitope_Rep3 1191.52704643515 1191.5259499358601 62.588 2 0.13289396260601538 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 72354 8430 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep2 1128.4645061286797 1128.46397496793 37.378 1 0.13289176005685518 0.0013303769401330377 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 11946 7486 DHSQAVTL True PC9_epitope_Rep2 869.42429561877 869.42318993586 34.166 2 0.13288614844950836 0.0013303769401330377 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 26267 12572 FIDASRLVY True H1975_Epitope_Rep1 1082.5760452329 1082.57494993586 53.405 2 0.13287925249026566 0.0013303769401330377 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'CTNNA1|p.L776Pfs*102|1|0.11|ENSG00000044115|chr5:138932603-138932604|-/C|frameshift_variant', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 139021 15045 YSHGPIAVL True PC9_epitope_Rep5 955.5127167003499 955.51160993586 62.874 2 0.13287205808837585 0.0013303769401330377 0.9438714419765777 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 4272 23139 AIIPYIPTL True PC9_epitope_Rep5 999.60046907559 999.59936993586 93.992 2 0.1328705746701438 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 74768 14539 NLLSVAYK True PC9_epitope_Rep5 906.5174677276199 906.51636993586 60.922 2 0.13286907329048628 0.0013303769401330377 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 48688 5782 KEMEKSFEV True H1975_Epitope_Rep2 1125.5376111188498 1125.53596490379 27.234 3 0.13286459804165304 0.0013303769401330377 0.9438714419765777 ['ENSG00000091527|ENST00000264993|CDV3'] 25373 8968 FEIEPDKEC True H1975_Epitope_Rep2 1108.47467650912 1108.47356993586 39.449 2 0.13286282248647882 0.0013303769401330377 0.9438714419765777 ['ENSG00000100941|ENST00000216832|PNN'] 96770 8356 SEQPTLVTA True H1975_Epitope_Rep3 944.4814761417199 944.48092496793 37.125 1 0.1328600887512359 0.0013303769401330377 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 103329 17950 SQVDRLVALA True PC9_epitope_Rep3 1070.6084079903399 1070.60730993586 74.25 2 0.1328582273595518 0.0013303769401330377 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 125974 8781 VPAGGAVAV True PC9_epitope_Rep6 739.42283906679 739.42229496793 43.673 1 0.13285526365969838 0.0013303769401330377 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 21601 19220 ERSNDYFVL True PC9_epitope_Rep3 1141.54038800017 1141.53928993586 79.15 2 0.1328518055971086 0.0013303769401330377 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.R30G|1|0.06|ENSG00000133138|chrX:106802941-106802941|C/G|missense_variant'] 96322 11309 SEEVTPIAV True H1975_Epitope_Rep2 943.4862271689899 943.48512993586 48.547 2 0.13285100193863433 0.0013303769401330377 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 43420 13340 IHSPVVNEL True PC9_epitope_Rep1 1006.54474510462 1006.54364993586 56.172 2 0.13284411789200135 0.0013303769401330377 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 75882 17185 NRDPILVSL True PC9_epitope_Rep4 1025.58694426977 1025.58584993586 74.107 2 0.13284191175441035 0.0013303769401330377 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 127045 18236 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 74.936 2 0.13283861150133694 0.0013303769401330377 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 97909 7569 SHMEGVASV True PC9_epitope_Rep5 915.4120166829099 915.41090993586 34.063 2 0.13283698022685916 0.0013303769401330377 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 67095 10612 LTDAIDEY True H1975_Epitope_Rep2 938.4232925592601 938.42274496793 45.842 1 0.13283101792918894 0.0013303769401330377 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 72377 9670 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4684899358601 42.177 2 0.1328225291794148 0.0013303769401330377 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 76796 5785 NVDPVQHTY True H1975_Epitope_Rep3 1071.4985231881901 1071.49742993586 27.277 2 0.13281925525383587 0.0013303769401330377 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN'] 25235 15451 FEDDAIQLV True H1975_Epitope_Rep2 1048.50769088956 1048.50717496793 64.588 1 0.1328184203329098 0.0013303769401330377 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 106884 18391 SYIELPAYL True NCI_RA007_Epitope_Rep5 1067.55391280599 1067.55280993586 77.55 2 0.13280667071306582 0.0013303769401330377 0.9438714419765777 ['ENSG00000162511|ENST00000294507|LAPTM5'] 77440 7945 NYNNQSSNF True PC9_epitope_Rep2 1086.4366512076201 1086.43554993586 35.925 2 0.1328005674175061 0.0013303769401330377 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 13572 18999 DPNTVFALVNY True H1975_Epitope_Rep3 1251.6135529404298 1251.61244993586 79.676 2 0.13279820714942156 0.0013303769401330377 0.9438714419765777 ['CON__P34955'] 132616 18643 VYPQYVIEY True PC9_epitope_Rep6 1172.57537652656 1172.5748749679299 84.354 1 0.1327935126997417 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 31920 13066 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.4912699358601 55.347 2 0.13279327931992482 0.0013303769401330377 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 90546 11071 RKFLETVEL True NCI_RA007_Epitope_Rep2 1133.6444591458899 1133.6433699358602 47.653 2 0.13279089849770945 0.0013303769401330377 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 140517 21278 YYITGNLETF True PC9_epitope_Rep2 1219.57610480255 1219.5750099358602 87.308 2 0.1327842183133011 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 132620 12391 VYPSSLSKI True PC9_epitope_Rep2 992.5542471591599 992.55314993586 52.97 2 0.13278292632920535 0.0013303769401330377 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 75525 19995 NQLDSLM[Oxidation]GL True PC9_epitope_Rep1 1005.48009662317 1005.47898993586 81.738 2 0.13278157784262012 0.0013303769401330377 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 104421 6400 SSIQGQWPK True NCI_RA007_Epitope_Rep3 1029.5243440132099 1029.5232499358601 32.179 2 0.13278134775789815 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000054267|Q4LE39-4|ARID4B', 'ENST00000491632.5_1_1:235341091-235490234:-|nuORF', 'nc|ENSG00000054267|Q4LE39-3|ARID4B', 'nc|ENSG00000054267|Q4LE39-2|ARID4B', 'ENSG00000054267|ENST00000264183|ARID4B'] 114425 10284 TSDVGGYYY True H1975_Epitope_Rep1 1023.4185415319901 1023.41797496793 44.502 1 0.13278004015932152 0.0013303769401330377 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 110735 7103 TKFETEQAL True NCI_RA007_Epitope_Rep5 1065.5342399905699 1065.5331499358601 34.002 2 0.132756762807568 0.0013303769401330377 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'chr17:16843820-16844252|422|10.65|0.55|4.27|-|1|KRT17P1,KRT17P1|1', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 114968 17446 TTILQLHEI True PC9_epitope_Rep4 1066.6022599807402 1066.60116993586 75.101 2 0.1327525710267009 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 114361 8929 TSDETTLEY True H1975_Epitope_Rep1 1057.44515020265 1057.4445749679298 39.251 1 0.13275135628189413 0.0013303769401330377 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 120168 17013 VFLENVIR True PC9_epitope_Rep4 988.5705659296399 988.56946993586 73.433 2 0.13274579418135626 0.0013303769401330377 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 72207 8451 MRSPQMVSA True PC9_epitope_Rep3 1005.47357139365 1005.47246993586 37.471 2 0.1327453342373573 0.0013303769401330377 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 25231 15350 FEDDAIQLV True H1975_Epitope_Rep1 1048.50769088956 1048.5065899358601 64.312 2 0.13274144429765028 0.0013303769401330377 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 139431 16112 YTELEAIMY True H1975_Epitope_Rep3 1131.5158130451098 1131.51527496793 67.433 1 0.13273836016966886 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 126909 10128 VPVDTGVAA True PC9_epitope_Rep1 827.4388830537498 827.43833496793 43.831 1 0.1327289213475212 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 77437 8643 NYNNQSSNF True PC9_epitope_Rep1 1086.4366512076201 1086.43554993586 38.084 2 0.13272581245752674 0.0013303769401330377 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 9334 8054 AVSTFAMVK True NCI_RA007_Epitope_Rep3 952.5051887917599 952.50408993586 38.766 2 0.13272562741674696 0.0013303769401330377 0.9438714419765777 ['ENSG00000172893|ENST00000355527|DHCR7', 'ENST00000534701.1_1_11:71149825-71152361:-|nuORF'] 34528 6632 GQEDHYNNL True PC9_epitope_Rep5 1088.45230127176 1088.45120993586 30.484 2 0.13272461189929277 0.0013303769401330377 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 32048 14119 GEVLMVQV True NCI_RA007_Epitope_Rep5 873.4629896266098 873.46188993586 60.998 2 0.13271720004005916 0.0013303769401330377 0.9438714419765777 ['ENSG00000120948|ENST00000240185|TARDBP'] 16313 5653 EEISNLKAA True NCI_RA007_Epitope_Rep5 973.5080252427299 973.50692993586 28.432 2 0.13271620210910548 0.0013303769401330377 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000584875.1_1_18:18548690-18549151:-|nuORF'] 88899 6129 REAQSLISA True H1975_Epitope_Rep2 973.5192586327698 973.51816993586 28.552 2 0.13271606208663744 0.0013303769401330377 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 34671 21196 GQLDFSEFL True PC9_epitope_Rep6 1054.49712620586 1054.49657496793 94.378 1 0.1327132232718178 0.0013303769401330377 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 35805 20333 GTYDIFYTA True PC9_epitope_Rep4 1049.47057710485 1049.47007496793 86.355 1 0.13270656592095198 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 11937 17450 DHSPDLYSL True PC9_epitope_Rep3 1045.47163973401 1045.4705499358602 72.295 2 0.13269813982317968 0.0013303769401330377 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ENST00000417716.1_1_1:197191903-197192119:+|nuORF'] 7036 10756 AQSKGIYYV True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 46.365 2 0.13269768285837322 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 47089 8017 IVVNLTGR True NCI_RA007_Epitope_Rep5 870.5287011176599 870.52760993586 37.528 2 0.13269616124984504 0.0013303769401330377 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 75576 19630 NQPGVLIQV True PC9_epitope_Rep3 966.5498304850599 966.54928496793 80.745 1 0.13269453137873477 0.0013303769401330377 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 103013 21184 SQITSLVTL True PC9_epitope_Rep5 960.54916177872 960.54806993586 86.531 2 0.132684147941051 0.0013303769401330377 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 87383 13921 QTDNIIYVY True H1975_Epitope_Rep1 1127.5498900547097 1127.54937496793 58.699 1 0.13267949620788805 0.0013303769401330377 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF', 'IFT172|p.K94N|1|0.12|ENSG00000138002|chr2:27485032-27485032|C/G|missense_variant'] 87041 5136 QSDPTQSGM[Oxidation]Y True H1975_Epitope_Rep3 1128.43935401 1128.43824993586 24.859 2 0.132673966411103 0.0013303769401330377 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 95693 9293 SAYDGKDYIA True PC9_epitope_Rep4 1101.49785448185 1101.4967499358602 43.352 2 0.13266940001882213 0.0013303769401330377 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 32465 6858 GGIGTVPVGR True NCI_RA007_Epitope_Rep1 911.5188647099499 911.51776993586 30.68 2 0.1326647187493795 0.0013303769401330377 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 85971 16175 QPFGDHIISV True PC9_epitope_Rep6 1111.56620882519 1111.5651099358602 74.573 2 0.13266078145301338 0.0013303769401330377 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 115868 5087 TVNTSLVGK True NCI_RA007_Epitope_Rep4 917.5181960036099 917.51708993586 26.075 2 0.1326600076885435 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000180376|A2RUB6-3|CCDC66', 'ENSG00000180376|ENST00000394672|CCDC66', 'ENST00000422788.5_1_3:56595403-56599181:+|nuORF', 'ENST00000469966.1_1_3:56592935-56598176:+|nuORF', 'ENST00000472582.5_1_3:56591255-56599181:+|nuORF', 'nc|ENSG00000180376|A2RUB6-4|CCDC66', 'nc|ENSG00000180376|A2RUB6-2|CCDC66'] 105902 22633 SVLDGLLYV True PC9_epitope_Rep4 977.54334812229 977.54224993586 95.285 2 0.1326586875738172 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 7943 18921 ATDIFSYL True H1975_Epitope_Rep2 928.4541987647201 928.4536549679301 78.548 1 0.13265221826170612 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A', 'nc|ENSG00000100796|Q6IN85-2|PPP4R3A', 'ENSG00000100796|ENST00000554943|PPP4R3A', 'ENST00000554574.1_1_14:91942052-91948315:-|nuORF', 'nc|ENSG00000100796|Q6IN85-5|PPP4R3A', 'nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B', 'nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B', 'ENSG00000275052|ENST00000616407|PPP4R3B'] 87918 18180 QVPDDLPNV True PC9_epitope_Rep1 995.4923751785899 995.49126993586 74.72 2 0.13264580153988625 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 7182 16338 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.5233099358602 68.09 2 0.13263693826198633 0.0013303769401330377 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 61208 16061 LLDPASFEY True H1975_Epitope_Rep3 1053.50187723313 1053.50137496793 67.235 1 0.13263621084001753 0.0013303769401330377 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 109968 16035 THSLPVVVI True PC9_epitope_Rep6 963.5753169569099 963.57420993586 74.002 2 0.13263366380934843 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 46920 21570 IVLDRLIEL True PC9_epitope_Rep1 1082.66994561774 1082.6688499358602 87.79 2 0.13263325988100544 0.0013303769401330377 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 31610 8045 GEGGSFVDA True H1975_Epitope_Rep2 837.3504619721699 837.3499149679301 35.896 1 0.13263161091841194 0.0013303769401330377 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 86794 15211 QRNLDNIVL True PC9_epitope_Rep2 1083.6036569630699 1083.60254993586 63.774 2 0.13263120033703646 0.0013303769401330377 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 113835 11900 TREEGTPLTL True PC9_epitope_Rep2 1115.5822528121498 1115.5811499358601 51.098 2 0.1326288349111989 0.0013303769401330377 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 58380 6572 LEVLSGER True NCI_RA007_Epitope_Rep2 901.4868958753299 901.48578993586 30.176 2 0.13262193567807973 0.0013303769401330377 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 74199 18994 NIANHFFTV True PC9_epitope_Rep2 1061.52942939365 1061.52832993586 78.427 2 0.1326144852587029 0.0013303769401330377 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 139920 13095 YVFPGVTRL True H1975_Epitope_Rep2 1050.58621599378 1050.5851099358601 55.495 2 0.1326081182428939 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 11669 10791 DHDITSQL True PC9_epitope_Rep2 927.42977492203 927.42866993586 46.826 2 0.1326078092344334 0.0013303769401330377 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 75857 10510 NRDLSTPGL True PC9_epitope_Rep5 971.5036085686299 971.50250993586 45.414 2 0.13259685553036568 0.0013303769401330377 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 120270 16732 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 69.498 2 0.13258987879873907 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 131374 11202 VVSPALRAV True PC9_epitope_Rep5 910.5600012459399 910.55890993586 48.077 2 0.13258929742342718 0.0013303769401330377 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000196911|ENST00000368564|KPNA5'] 103330 17786 SQVDRLVALA True PC9_epitope_Rep5 1070.6084079903399 1070.60730993586 73.431 2 0.13258861381942794 0.0013303769401330377 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 28165 17831 FRMPVLREY True PC9_epitope_Rep5 1209.6328489163698 1209.6312149037901 73.606 3 0.13258311063125136 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000062282|Q96PD7-2|DGAT2', 'ENSG00000062282|ENST00000228027|DGAT2', 'ENST00000603865.1_1_11:75507249-75507624:+|nuORF', 'ENST00000603363.5_1_11:75507249-75511550:+|nuORF'] 103512 17137 SRDAFGYATL True PC9_epitope_Rep3 1099.52982331647 1099.5287299358602 71.075 2 0.13257852783735585 0.0013303769401330377 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 76155 7471 NRSDPVTL True PC9_epitope_Rep2 900.46649478392 900.46538993586 34.109 2 0.13257362662852507 0.0013303769401330377 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 73607 21632 NGFPVFATV True PC9_epitope_Rep2 950.48616759934 950.48561496793 88.683 1 0.13257316264840985 0.0013303769401330377 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 44870 20457 IQALISGIEA True PC9_epitope_Rep5 1013.57571087973 1013.57517496793 83.725 1 0.13257082027420988 0.0013303769401330377 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 71845 18837 MPFGNVVSA True PC9_epitope_Rep4 920.4425885351999 920.44203496793 80.543 1 0.13257021612376638 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 8833 10608 AVFPSIVGR True NCI_RA007_Epitope_Rep3 944.5443511817999 944.54324993586 48.777 2 0.13256798551720994 0.0013303769401330377 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 67229 11995 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48076993586 51.146 2 0.13256531791450246 0.0013303769401330377 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 7917 13081 ATDDITELY True H1975_Epitope_Rep2 1039.47097102767 1039.46986993586 55.439 2 0.1325638673535653 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 86285 8109 QQDPQQYNV True PC9_epitope_Rep6 1118.49925146418 1118.49814993586 40.722 2 0.1325616952474735 0.0013303769401330377 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 130890 12645 VVHDGFEGL True PC9_epitope_Rep4 971.47124581119 971.47014993586 56.479 2 0.13254810916430304 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 9899 22795 AYPEYLITF True PC9_epitope_Rep3 1115.55391280599 1115.55280993586 92.953 2 0.1325395730289089 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 65183 15464 LSDVFPGVQY True H1975_Epitope_Rep2 1123.5549754351498 1123.55447496793 64.639 1 0.13252970621204382 0.0013303769401330377 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 31964 7436 GESPVDYDGGR True PC9_epitope_Rep3 1150.4890807032998 1150.48798993586 33.607 2 0.13252643571102202 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 132026 12151 VYGSFASKL True PC9_epitope_Rep6 970.5123823471799 970.51128993586 58.091 2 0.13252566208136282 0.0013303769401330377 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 56960 4745 LEDVSKPPA True H1975_Epitope_Rep3 954.5022115863 954.50110993586 23.378 2 0.13252293920355684 0.0013303769401330377 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 94760 14790 RYLPDTLLL True NCI_RA007_Epitope_Rep5 1102.63864548946 1102.63754993586 63.561 2 0.13252212734704424 0.0013303769401330377 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 138152 19595 YQLPEILRT True PC9_epitope_Rep2 1131.6288090817498 1131.6277099358601 80.755 2 0.13251851824326769 0.0013303769401330377 0.9438714419765777 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 1323 9782 AEEADLIQA True H1975_Epitope_Rep1 958.4607406971398 958.4601949679301 42.555 1 0.13251454958325123 0.0013303769401330377 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 97905 6534 SHMEGVASV True PC9_epitope_Rep2 915.4120166829099 915.41090993586 30.548 2 0.13251305166189298 0.0013303769401330377 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 2468 6206 AEQPPHLTP True H1975_Epitope_Rep3 988.4977949122 988.49668993586 28.884 2 0.1325108625364593 0.0013303769401330377 0.9438714419765777 ['ENSG00000146733|ENST00000275605|PSPH'] 138682 17279 YRTDMIQAL True PC9_epitope_Rep5 1109.55392988933 1109.55282993586 71.471 2 0.13250924625166252 0.0013303769401330377 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 108592 4845 TEIGSIHSA True NCI_RA007_Epitope_Rep3 913.45051036661 913.44940993586 26.043 2 0.13250808915503623 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 104128 6986 SRYSSTETL True PC9_epitope_Rep1 1042.49310345458 1042.49200993586 31.677 2 0.1325048428849618 0.0013303769401330377 0.9438714419765777 ['ARHGEF17|p.G618Wfs*4|1|0.39|ENSG00000110237|chr11:73310481-73310482|-/C|frameshift_variant', 'ENSG00000110237|ENST00000263674|ARHGEF17'] 61585 19614 LLGPRLVLA True PC9_epitope_Rep1 950.6276868829399 950.62658993586 80.272 2 0.13249594392837918 0.0013303769401330377 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 74002 6969 NHQGTYVL True PC9_epitope_Rep6 930.4559301002199 930.45482993586 35.764 2 0.13249139489269332 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 6332 5900 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 29.596 2 0.13249008981423266 0.0013303769401330377 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 107416 17513 SYTSGLETL True PC9_epitope_Rep4 969.4654917244101 969.46438993586 75.367 2 0.1324889270001721 0.0013303769401330377 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 28391 11696 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44364993586 49.98 2 0.1324881941265898 0.0013303769401330377 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 21779 13179 ESDFSNPLY True H1975_Epitope_Rep2 1070.4556553167 1070.45507496793 55.818 1 0.13246922742745817 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 119830 6074 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51676993586 28.43 2 0.13245294601758995 0.0013303769401330377 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 52744 16183 KQLSDTSIIAV True PC9_epitope_Rep3 1173.6605031328502 1173.6594099358601 67.386 2 0.13245099112296763 0.0013303769401330377 0.9438714419765777 ['ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000145743|Q9UF56-3|FBXL17', 'nc|ENSG00000145743|Q9UF56-2|FBXL17'] 76630 8366 NTIDPSHPM True PC9_epitope_Rep2 1010.4491304676201 1010.44802993586 37.551 2 0.13243474721794035 0.0013303769401330377 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 123066 16946 VHAEEVIVL True PC9_epitope_Rep1 1007.5651461960299 1007.56404993586 70.007 2 0.132434070063319 0.0013303769401330377 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'KDM3B|p.A1619Rfs*25|1|0.09|ENSG00000120733|chr5:138429926-138429927|-/C|frameshift_variant'] 9802 13007 AYLHTTTTF True PC9_epitope_Rep3 1053.51311062317 1053.51200993586 55.06 2 0.13242911858569822 0.0013303769401330377 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 137161 21332 YLDPSVLSGV True PC9_epitope_Rep5 1048.54407639828 1048.54357496793 87.11 1 0.13242428240188125 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 11880 17485 DHNYQSYIL True PC9_epitope_Rep2 1151.52473793603 1151.52364993586 72.511 2 0.13242426775994837 0.0013303769401330377 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 77513 17533 NYQGHFHLF True PC9_epitope_Rep3 1161.5355774032498 1161.53392490379 72.624 3 0.13241935493635612 0.0013303769401330377 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 116730 12907 TYLDKIKKF True PC9_epitope_Rep5 1154.66994561774 1154.6683049037902 54.659 3 0.13241521342900933 0.0013303769401330377 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 103580 14395 SRDGMNIVL True PC9_epitope_Rep4 1003.5120650773499 1003.51096993586 63.28 2 0.13241275881553324 0.0013303769401330377 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 27087 22598 FLPSYIIDV True PC9_epitope_Rep2 1065.57464825057 1065.57354993586 92.423 2 0.13239988225054836 0.0013303769401330377 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 39677 9641 HPTEDLVVSA True PC9_epitope_Rep4 1066.5294889632999 1066.52838993586 44.708 2 0.1323960626200693 0.0013303769401330377 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 75827 15085 NRDGNIVFV True PC9_epitope_Rep3 1032.5352430500798 1032.5341499358601 63.162 2 0.13239490068161044 0.0013303769401330377 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'NCOA3|p.K620Nfs*18|1|0.15|ENSG00000124151|chr20:47636241-47636241|A/-|frameshift_variant', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 139014 15588 YSHDGAFLAV True PC9_epitope_Rep2 1078.5083595959 1078.5072699358602 65.236 2 0.13239111478029414 0.0013303769401330377 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF'] 140369 15207 YYEKLHTYF True PC9_epitope_Rep5 1262.5971746003 1262.59552490379 63.502 3 0.13238559610044673 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 95577 5166 SASGPLHSV True PC9_epitope_Rep4 853.4293809992101 853.42828993586 26.561 2 0.13237268459172644 0.0013303769401330377 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 25512 7680 FEQEMATAA True H1975_Epitope_Rep3 996.4222470134398 996.4216949679301 34.524 1 0.13236778866479929 0.0013303769401330377 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 95576 5088 SASGPLHSV True PC9_epitope_Rep4 853.4293809992101 853.42828993586 26.223 2 0.13236409816140443 0.0013303769401330377 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 132995 19466 VYVGSGGWRF True PC9_epitope_Rep5 1126.5559784946597 1126.55488993586 79.929 2 0.1323522022618617 0.0013303769401330377 0.9438714419765777 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000598424.5_1_19:17581379-17594898:+|nuORF'] 23862 18523 EYMEHTYLI True PC9_epitope_Rep5 1197.5376111188498 1197.53650993586 76.273 2 0.13234736172201286 0.0013303769401330377 0.9438714419765777 ['ENSG00000141447|ENST00000319481|OSBPL1A', 'nc|ENSG00000141447|Q9BXW6-2|OSBPL1A', 'nc|ENSG00000141447|Q9BXW6-4|OSBPL1A'] 136419 15535 YHFPDQQEL True PC9_epitope_Rep2 1175.52473793603 1175.52364993586 65.028 2 0.132346309257636 0.0013303769401330377 0.9438714419765777 ['ENSG00000165490|ENST00000533655|DDIAS'] 74720 24439 NLLDLLTEV True PC9_epitope_Rep2 1028.57537652656 1028.57426993586 99.579 2 0.13234542588443748 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 6329 5524 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 28.013 2 0.1323351537411445 0.0013303769401330377 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 61589 19087 LLGPRLVLA True PC9_epitope_Rep2 950.6276868829399 950.62658993586 78.784 2 0.13233041579809737 0.0013303769401330377 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 123652 13977 VILPTVHEV True PC9_epitope_Rep6 1005.5858816406101 1005.58478993586 65.621 2 0.1323303596544565 0.0013303769401330377 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant', 'ENST00000487662.1_1_3:57643405-57651906:-|nuORF'] 94075 13724 RVVDLLNQA True PC9_epitope_Rep4 1026.5821932425 1026.58108993586 60.681 2 0.13232891505066222 0.0013303769401330377 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 8097 12978 ATELQSMMY True H1975_Epitope_Rep3 1072.45691827 1072.4563749679298 55.153 1 0.1323272272056841 0.0013303769401330377 0.9438714419765777 ['ENSG00000196284|ENST00000371459|SUPT3H'] 106969 16581 SYLEKQVVTF True PC9_epitope_Rep4 1212.6390394122798 1212.6379499358602 71.755 2 0.13232548834530003 0.0013303769401330377 0.9438714419765777 ['ENSG00000018699|ENST00000317907|TTC27'] 40291 10876 HRQEIQVVL True PC9_epitope_Rep2 1120.63529144452 1120.6341899358601 47.152 2 0.1323229592445564 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 103284 13581 SQTLVSQGL True PC9_epitope_Rep4 931.4974605590301 931.49636993586 60.134 2 0.1323213441483408 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 109675 10317 THEDPVIAV True PC9_epitope_Rep4 979.49746055903 979.49636993586 47.373 2 0.13232125180074975 0.0013303769401330377 0.9438714419765777 ['ENSG00000103148|ENST00000611875|NPRL3'] 42116 12349 IEENSNVILP True H1975_Epitope_Rep3 1126.58700383942 1126.5859099358602 52.686 2 0.1323203810208453 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000417282.1_1_7:56372411-56373020:-|nuORF'] 27323 15626 FMDPASALY True H1975_Epitope_Rep2 1013.45281886573 1013.45172993586 65.259 2 0.13231767429025157 0.0013303769401330377 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 106388 5207 SVSTVLTSK True NCI_RA007_Epitope_Rep3 920.51786165044 920.51676993586 27.481 2 0.13231261598336727 0.0013303769401330377 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 129485 15898 VTETNVFFY True H1975_Epitope_Rep2 1118.5284263341398 1118.52732993586 66.353 2 0.13231207772986428 0.0013303769401330377 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C', 'nc|ENSG00000176986|P53992-2|SEC24C'] 40296 12573 HRQEIQVVL True PC9_epitope_Rep5 1120.63529144452 1120.6341899358601 53.361 2 0.13230952336085772 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 1005 6216 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.4179949679301 28.879 1 0.1322941725079271 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 132858 12652 VYTSGIYNI True NCI_RA007_Epitope_Rep3 1028.51786165044 1028.51676993586 57.01 2 0.13229308137030446 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1'] 97599 17146 SHADVVNLL True PC9_epitope_Rep3 966.51344497634 966.51234993586 71.108 2 0.1322725128077452 0.0013303769401330377 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 89145 13052 REGDLLFTVA True NCI_RA007_Epitope_Rep3 1119.5924235730301 1119.5913299358601 58.617 2 0.13226836824555224 0.0013303769401330377 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF', 'ENST00000483517.5_1_1:32688126-32691885:+|nuORF'] 124693 17570 VLITTDLLAR True PC9_epitope_Rep6 1113.6757592741699 1113.67466993586 80.223 2 0.13226329980216772 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000494445.1_1_3:186505247-186506105:+|nuORF', 'ENST00000461021.1_1_3:186505247-186505672:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1'] 6391 21166 APRTVLLLLSA True PC9_epitope_Rep5 1152.7230438197598 1152.72194993586 86.464 2 0.13225960750808827 0.0013303769401330377 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF', 'ENST00000434333.1_1_6:31324722-31324935:-|nuORF'] 72163 22170 MRLFLSLPV True PC9_epitope_Rep5 1074.6259726307799 1074.62486993586 90.315 2 0.1322579254442482 0.0013303769401330377 0.9438714419765777 ['ENSG00000130208|ENST00000592535|APOC1'] 125340 9882 VLSIGDGIAR True NCI_RA007_Epitope_Rep1 999.5712942056299 999.57018993586 42.441 2 0.13223701919464248 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000589611.1_1_18:43669530-43671830:-|nuORF', 'ENST00000590448.5_1_18:43669752-43675082:-|nuORF'] 32099 10888 GEYGKFFVT True H1975_Epitope_Rep1 1046.50729696674 1046.5061899358602 46.841 2 0.1322321232086978 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17'] 97017 9404 SEVQYIQEA True H1975_Epitope_Rep2 1065.4978544818498 1065.49727496793 41.138 1 0.13223172125021876 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 39820 11619 HQFESSFEL True NCI_RA007_Epitope_Rep4 1122.4981888350198 1122.49708993586 51.646 2 0.13223152764267979 0.0013303769401330377 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 79084 15456 PFVDHVFTF True NCI_RA007_Epitope_Rep5 1107.53893144819 1107.5378299358601 66.15 2 0.13222786751717006 0.0013303769401330377 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 115275 12513 TVDNARIVL True PC9_epitope_Rep2 999.5712942056299 999.57018993586 53.439 2 0.13221251303510875 0.0013303769401330377 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 116733 10702 TYLDKVENI True NCI_RA007_Epitope_Rep4 1093.56554011885 1093.56444993586 48.011 2 0.1322084874977352 0.0013303769401330377 0.9438714419765777 ['ENSG00000185745|ENST00000371804|IFIT1', 'nc|ENSG00000185745|P09914-2|IFIT1'] 107996 9984 [Acetylation]-TDAAVSFAK True H1975_Epitope_Rep1 950.47091177432 950.46980993586 43.338 2 0.13220792587429814 0.0013303769401330377 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant'] 57695 8471 LENDQIESLR True NCI_RA007_Epitope_Rep1 1215.60953018915 1215.6084299358602 36.949 2 0.1322053284474284 0.0013303769401330377 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF'] 31277 10072 GDSVIVVLR True NCI_RA007_Epitope_Rep5 956.5654805492 956.56438993586 45.379 2 0.13220482943002243 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 132643 15417 VYQHLFTRI True PC9_epitope_Rep3 1175.6451278522297 1175.64349490379 64.456 3 0.1322018893578944 0.0013303769401330377 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 325 6080 AAIISAEGDSK True PC9_epitope_Rep3 1060.540053647 1060.53894993586 28.435 2 0.13220134982359605 0.0013303769401330377 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000355202.8_1_19:38187524-38187836:-|nuORF'] 48411 6665 KEDLYLKPIQR True NCI_RA007_Epitope_Rep1 1401.79799966517 1401.7963649037902 29.937 3 0.1321906276672425 0.0013303769401330377 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 4414 13447 AIVDKVPSV True PC9_epitope_Rep3 926.54368247546 926.54258993586 56.769 2 0.13216943718846214 0.0013303769401330377 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 49469 21634 KIWEELSVLEV True PC9_epitope_Rep2 1343.73366807311 1343.73256993586 88.69 2 0.132163603805093 0.0013303769401330377 0.9438714419765777 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|245|11.93|0.02|9.4|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3'] 109500 17504 THAAEDIVYTL True PC9_epitope_Rep2 1231.6084675599898 1231.60736993586 72.586 2 0.1321469824437253 0.0013303769401330377 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 131994 19332 VYGNERFIQYL True PC9_epitope_Rep4 1400.7088503075997 1400.7077499358602 82.468 2 0.13213909202820331 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000528411.1_1_11:85734561-85780352:-|nuORF'] 70922 12629 M[Oxidation]ELITPISA True H1975_Epitope_Rep3 989.5103341222899 989.50978496793 53.783 1 0.13213742623195956 0.0013303769401330377 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 67259 12709 LTDLYSPEY True H1975_Epitope_Rep1 1099.50735653639 1099.50677496793 53.942 1 0.1321297305843833 0.0013303769401330377 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 25209 9084 FEADPPGQVAA True H1975_Epitope_Rep2 1100.51383889916 1100.5132749679299 39.893 1 0.13212968865034297 0.0013303769401330377 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 8039 10459 ATDVNDALGY True H1975_Epitope_Rep3 1037.4665543535698 1037.46597496793 45.293 1 0.13212322792183956 0.0013303769401330377 0.9438714419765777 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 103050 17996 SQLDSPKALYL True PC9_epitope_Rep1 1233.66050313285 1233.6594099358601 74.014 2 0.132116207454675 0.0013303769401330377 0.9438714419765777 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 113856 14332 TREGGSIPVTL True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 60.13 2 0.13211278756633818 0.0013303769401330377 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 96782 15767 SEQYYIIEV True H1975_Epitope_Rep3 1142.54955570154 1142.5484499358602 66.096 2 0.13210451330000916 0.0013303769401330377 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 88925 6081 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.54984993586 28.366 2 0.13210107177807057 0.0013303769401330377 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 101710 4773 SPGLQKEAV True PC9_epitope_Rep4 927.5025459394699 927.50144993586 24.931 2 0.132094685452294 0.0013303769401330377 0.9438714419765777 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 140317 7699 YYEEQHPEL True NCI_RA007_Epitope_Rep4 1206.5193182024198 1206.51822993586 36.28 2 0.13209449540947987 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 87462 4726 QTETAADCRY True H1975_Epitope_Rep2 1156.48188714788 1156.48078993586 23.272 2 0.13207401373153912 0.0013303769401330377 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217'] 31535 13324 GEFGGFGSV True NCI_RA007_Epitope_Rep4 855.3762827971899 855.37573496793 58.4 1 0.13207024144702004 0.0013303769401330377 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 77630 20138 NYVQAVEEF True PC9_epitope_Rep2 1097.5029398622898 1097.50184993586 82.872 2 0.13206775779694446 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 99265 22311 SLDDLLTNV True PC9_epitope_Rep1 988.5076908895601 988.50658993586 90.631 2 0.13206655707633358 0.0013303769401330377 0.9438714419765777 ['ENSG00000143819|ENST00000272167|EPHX1'] 42691 9196 IEVVPSASA True H1975_Epitope_Rep2 871.4650978015899 871.46454496793 40.325 1 0.13206626841228222 0.0013303769401330377 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF', 'nc|ENSG00000197958|P30050-2|RPL12'] 96537 11953 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42816496793 51.055 1 0.13206605429344473 0.0013303769401330377 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 47199 18093 IYAPKLQEF True PC9_epitope_Rep3 1107.59644632431 1107.5953499358602 74.791 2 0.13205883667120627 0.0013303769401330377 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 97412 6740 [Acetylation]-SGFSTEER True H1975_Epitope_Rep3 953.4090397937499 953.40794993586 30.88 2 0.13204784371030318 0.0013303769401330377 0.9438714419765777 ['ENSG00000180817|ENST00000373232|PPA1'] 105818 14800 SVIPQIQKV True PC9_epitope_Rep1 1010.6124307416198 1010.61132993586 61.748 2 0.13203713083857405 0.0013303769401330377 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 75689 14688 NQTPVTLQV True PC9_epitope_Rep6 998.5396597241801 998.53911496793 68.429 1 0.13203595681161095 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 124977 16708 VLNEYFHNV True PC9_epitope_Rep3 1133.5505587610498 1133.54946993586 69.401 2 0.13202983773308485 0.0013303769401330377 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 89709 11588 REYPNLVTI True NCI_RA007_Epitope_Rep4 1103.59750895347 1103.59640993586 51.521 2 0.13202958898060935 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110'] 87471 13666 QTETGTPYMLY True H1975_Epitope_Rep1 1302.5802042068199 1302.57967496793 57.701 1 0.13202767264631632 0.0013303769401330377 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 42234 3335 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 17.606 2 0.13201661541748397 0.0013303769401330377 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 136590 18314 YHVPVVVVP True PC9_epitope_Rep2 1007.5804023373499 1007.57930993586 75.771 2 0.13201241772956585 0.0013303769401330377 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 132892 19936 VYTSVVEEL True PC9_epitope_Rep2 1037.5280919809697 1037.52698993586 82.081 2 0.13200264755222413 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 97902 7554 SHMEGVASV True PC9_epitope_Rep1 915.4120166829099 915.41090993586 33.874 2 0.13199777000225574 0.0013303769401330377 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 110165 9154 TIDEHDAII True H1975_Epitope_Rep3 1025.5029398622898 1025.50184993586 40.2 2 0.13199020305088252 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000152558|Q8N131-2|TMEM123', 'ENSG00000152558|ENST00000398136|TMEM123'] 31685 6159 GEIESKFNQA True H1975_Epitope_Rep3 1121.53530261973 1121.53477496793 28.703 1 0.1319881768124355 0.0013303769401330377 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 67518 15495 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.5746699358601 64.759 2 0.1319864482111097 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 102591 19506 SQANRLFYL True PC9_epitope_Rep3 1110.5821932425 1110.58108993586 80.261 2 0.1319828872660796 0.0013303769401330377 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 87032 7611 QSDKVYEVY True H1975_Epitope_Rep3 1129.52915461013 1129.52804993586 34.256 2 0.13198196870067283 0.0013303769401330377 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4', 'ENST00000456901.1_1_7:145280818-145281352:+|nuORF'] 91796 8356 RPLLKAITA True PC9_epitope_Rep4 981.63350053937 981.63240993586 39.599 2 0.13198167766513483 0.0013303769401330377 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 33778 9847 GLSQSALPYR True PC9_epitope_Rep6 1090.5771078620598 1090.5760099358602 48.353 2 0.13197736747591077 0.0013303769401330377 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 96413 7406 SEIDMSVKA True H1975_Epitope_Rep3 978.46919720586 978.46808993586 33.465 2 0.13197643086291405 0.0013303769401330377 0.9438714419765777 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 95109 18169 RYTVGGLETF True PC9_epitope_Rep5 1141.5767735088898 1141.57566993586 74.896 2 0.13197039712537015 0.0013303769401330377 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 53683 7329 KYAHMINGF True NCI_RA007_Epitope_Rep3 1079.52223583823 1079.52112993586 35.952 2 0.1319631765394095 0.0013303769401330377 0.9438714419765777 ['ENSG00000035687|ENST00000366535|ADSS2'] 18039 14480 EIIQRIENV True PC9_epitope_Rep2 1112.61897267404 1112.6178699358602 60.966 2 0.131960944961496 0.0013303769401330377 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 54123 16414 KYMVYPQTF True PC9_epitope_Rep2 1175.5685173243098 1175.56740993586 68.379 2 0.13195889517162887 0.0013303769401330377 0.9438714419765777 ['ENSG00000112996|ENST00000507110|MRPS30', 'MRPS30|p.V185Sfs*19|1|0.08|ENSG00000112996|chr5:44809514-44809515|-/A|frameshift_variant'] 44247 15941 ILTERGYSF True PC9_epitope_Rep3 1084.55530978832 1084.5542099358602 66.463 2 0.1319540545717481 0.0013303769401330377 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENST00000450451.1_1_1:238090483-238090852:+|nuORF', 'ENST00000570019.1_1_15:34666200-34666557:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 53817 15876 KYFLWVVKF True NCI_RA007_Epitope_Rep4 1228.7008518231999 1228.69921490379 68.936 3 0.1319531871760456 0.0013303769401330377 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 27962 9538 FQSKENLSV True PC9_epitope_Rep3 1050.53457434374 1050.53346993586 41.634 2 0.13195164670973866 0.0013303769401330377 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 47379 12992 IYIDRGVVF True NCI_RA007_Epitope_Rep4 1080.59678067748 1080.59568993586 57.073 2 0.1319510727348679 0.0013303769401330377 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11', 'nc|ENSG00000100109|Q9UBB9-2|TFIP11'] 88411 15200 QYQQIISRL True PC9_epitope_Rep4 1147.6349570913499 1147.63386993586 66.39 2 0.131940663634037 0.0013303769401330377 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 72489 12303 M[Oxidation]VAPAVASV True PC9_epitope_Rep5 859.4473399429099 859.44679496793 52.314 1 0.13193957738004972 0.0013303769401330377 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 104722 12182 STDHIPILY True H1975_Epitope_Rep2 1057.54441075145 1057.5433099358602 51.942 2 0.1319386004650652 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 83647 7798 QEAEPPLTA True H1975_Epitope_Rep2 954.4658260775799 954.46472993586 34.942 2 0.13193278588323945 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 29455 8315 FVHPGAATV True PC9_epitope_Rep2 897.4708518883699 897.46974993586 37.348 2 0.1319263336137255 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 24000 16947 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep2 1300.57578791316 1300.57468993586 70.429 2 0.13192264354618877 0.0013303769401330377 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 137313 11864 YLHSQVVSV True PC9_epitope_Rep5 1030.5447451046198 1030.54364993586 50.634 2 0.13191430194739606 0.0013303769401330377 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 132752 20422 VYSLQQFGF True PC9_epitope_Rep6 1087.53384606775 1087.53274993586 91.257 2 0.13190732547954748 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 108219 9175 TEAEDMISA True H1975_Epitope_Rep3 965.4011772156899 965.40006993586 40.282 2 0.1319056996810813 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B'] 34670 21195 GQLDFSEFL True PC9_epitope_Rep6 1054.49712620586 1054.4960299358602 94.374 2 0.1319049970899114 0.0013303769401330377 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 107757 15648 TAMDVVYAL True NCI_RA007_Epitope_Rep3 981.4841189940099 981.48302993586 69.167 2 0.1318985357505934 0.0013303769401330377 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 29280 10123 FVDKNNDLLY True H1975_Epitope_Rep1 1239.61355294043 1239.61244993586 43.874 2 0.13189030371189073 0.0013303769401330377 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 9944 18217 AYQSIQNYL True PC9_epitope_Rep6 1098.53457434374 1098.53346993586 82.715 2 0.1318841337794956 0.0013303769401330377 0.9438714419765777 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 77038 13388 NVVNRLTSV True PC9_epitope_Rep5 1000.56654317836 1000.56544993586 56.513 2 0.1318823032196887 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 14919 10893 DYLADKSYI True NCI_RA007_Epitope_Rep3 1086.5233409537 1086.5222499358601 49.922 2 0.13188163257538973 0.0013303769401330377 0.9438714419765777 ['ENST00000414101.1_1_3:174777654-174777819:-|nuORF', 'ENST00000479587.1_1_2:207024402-207025435:+|nuORF', 'ENST00000460760.1_1_2:207024637-207025435:+|nuORF', 'ENSG00000114942|ENST00000392222|EEF1B2'] 44970 8420 IQHPSNVL True PC9_epitope_Rep5 906.49231560894 906.49120993586 37.328 2 0.1318762484196313 0.0013303769401330377 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 62121 8321 LLPDDPYEK True H1975_Epitope_Rep1 1088.5389910178399 1088.5378899358602 36.938 2 0.13187512193860795 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000148834|P78417-2|GSTO1', 'nc|ENSG00000148834|P78417-3|GSTO1', 'ENSG00000148834|ENST00000369713|GSTO1'] 42056 6767 IEEDKWRVA True H1975_Epitope_Rep3 1144.5876725457601 1144.58602490379 30.984 3 0.13187490593788978 0.0013303769401330377 0.9438714419765777 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF', 'ENST00000508215.1_1_5:110842026-110848199:-|nuORF', 'nc|ENSG00000164211|Q96DR4-2|STARD4', 'STARD4|p.K141Rfs*29|1|0.29|ENSG00000164211|chr5:111500082-111500082|T/-|frameshift_variant', 'ENSG00000164211|ENST00000296632|STARD4'] 2440 3674 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 19.094 2 0.13187098560113095 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 1601 6362 AEFPSKPVA True H1975_Epitope_Rep2 944.4967322830398 944.49562993586 29.399 2 0.13187039156534364 0.0013303769401330377 0.9438714419765777 ['ENSG00000087510|ENST00000201031|TFAP2C', 'nc|ENSG00000087510|Q92754-2|TFAP2C'] 95388 5921 SAINEVVTR True NCI_RA007_Epitope_Rep3 987.53490869691 987.53380993586 30.269 2 0.1318691530637811 0.0013303769401330377 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 642 8766 AATGGGIVRV True PC9_epitope_Rep5 899.51886470995 899.51776993586 38.66 2 0.13186642522799752 0.0013303769401330377 0.9438714419765777 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000561993.5_1_16:8732964-8736423:+|nuORF'] 137988 20934 YQAPDIDVQL True PC9_epitope_Rep1 1160.57135377528 1160.5702499358601 85.344 2 0.13186264907926265 0.0013303769401330377 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 108357 4654 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 23.025 2 0.13186260260313415 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 9817 11049 AYLHTTTTF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 53.41 2 0.13186255496096014 0.0013303769401330377 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 53488 17483 KVLDILQHI True PC9_epitope_Rep6 1077.65462990677 1077.6535299358602 79.874 2 0.13185883248726116 0.0013303769401330377 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 18053 13639 EIIRQLNGV True PC9_epitope_Rep5 1040.59784330664 1040.59674993586 57.485 2 0.1318579620899244 0.0013303769401330377 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 132749 22488 VYSLQQFGF True PC9_epitope_Rep3 1087.53384606775 1087.53274993586 91.774 2 0.13185712253902018 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 72166 21568 MRLLSFVVL True PC9_epitope_Rep4 1076.64162269492 1076.64052993586 91.141 2 0.13185123637977336 0.0013303769401330377 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF', 'chr1:156020167-156020337|162|12.83|0.31|5.36|-|0|SSR2,None|1'] 97052 6223 SEYIHAQVA True H1975_Epitope_Rep3 1016.4927095317598 1016.49160993586 28.949 2 0.13184870020434655 0.0013303769401330377 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 105289 16580 STTNGGILTV True PC9_epitope_Rep1 961.50802524273 961.5074749679301 68.6 1 0.13184774138051167 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 2331 2721 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 14.563 2 0.13184498602109465 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 72500 15578 MVAPAVASV True PC9_epitope_Rep5 843.4524249429099 843.45132993586 64.931 2 0.1318376346185142 0.0013303769401330377 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 8019 11500 ATDPVTGDLY True H1975_Epitope_Rep3 1050.48695544498 1050.48637496793 49.359 1 0.13183702168258402 0.0013303769401330377 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 34929 19041 GQWIAETGV True PC9_epitope_Rep1 959.4712458111899 959.4706949679301 78.032 1 0.13183653349573235 0.0013303769401330377 0.9438714419765777 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 29880 16150 FVYENPISL True H1975_Epitope_Rep2 1080.54916177872 1080.5485749679299 67.333 1 0.13183157010615196 0.0013303769401330377 0.9438714419765777 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 30185 22056 FYVDSDMVNEF True PC9_epitope_Rep3 1364.5594687622395 1364.5583699358601 90.135 2 0.1318242145007376 0.0013303769401330377 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 75902 7598 NRDRTQIAL True PC9_epitope_Rep3 1085.59415490853 1085.59304993586 34.224 2 0.13181905595946622 0.0013598441692087178 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 54584 12781 LADAINTEF True NCI_RA007_Epitope_Rep4 992.48147614172 992.48036993586 56.225 2 0.13181902376956164 0.0013598441692087178 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 39072 5236 HKVPGDVSL True NCI_RA007_Epitope_Rep5 950.5185303567799 950.51742993586 26.837 2 0.13181619656223564 0.0013598441692087178 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 91829 13021 RPNDIMAEV True PC9_epitope_Rep2 1043.50697969691 1043.50588993586 55.366 2 0.1318028973391071 0.0013598441692087178 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 33586 20121 GLLAVLRPL True PC9_epitope_Rep2 950.6276868829399 950.62658993586 82.804 2 0.131797910053266 0.0013598441692087178 0.9438714419765777 ['ENSG00000168569|ENST00000307366|TMEM223'] 14864 13492 DYFEQYGK True PC9_epitope_Rep3 1048.4501760134401 1048.44906993586 56.947 2 0.1317849978486979 0.0013598441692087178 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 46179 8517 ITDHGSLIY True H1975_Epitope_Rep1 1017.51311062317 1017.51257496793 37.69 1 0.13177655477159295 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 136123 20140 YGFPSPIFL True H1975_Epitope_Rep3 1039.5378688190299 1039.53727496793 84.26 1 0.1317754738672613 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 106372 4725 SVSPVVHVR True NCI_RA007_Epitope_Rep4 978.5610638750999 978.55996993586 24.605 2 0.13177467251382408 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000143889|Q8WVV9-3|HNRNPLL', 'nc|ENSG00000143889|Q8WVV9-2|HNRNPLL', 'nc|ENSG00000143889|Q8WVV9-5|HNRNPLL', 'nc|ENSG00000143889|Q8WVV9-4|HNRNPLL', 'ENSG00000143889|ENST00000449105|HNRNPLL'] 83043 21572 PYLDSFYEY True PC9_epitope_Rep2 1195.5073565363898 1195.50624993586 88.448 2 0.13177434937381077 0.0013598441692087178 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 7982 4397 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 22.023 2 0.1317727041258964 0.0013598441692087178 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 110195 15866 TIDQLYLEY True H1975_Epitope_Rep3 1156.5652057656798 1156.5641099358602 66.477 2 0.1317726440531897 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 102826 21019 SQFPGAITL True PC9_epitope_Rep5 932.4967322830399 932.49562993586 85.908 2 0.13176849051764647 0.0013598441692087178 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 72372 9484 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4690749679298 41.4 1 0.13176794544406145 0.0013598441692087178 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 39779 12312 HQDLSTPVL True PC9_epitope_Rep4 1008.52400966004 1008.52290993586 55.17 2 0.13176592668778658 0.0013598441692087178 0.9438714419765777 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 108364 8919 TEDPNQLTV True H1975_Epitope_Rep1 1015.4822044177099 1015.4816749679301 39.211 1 0.1317645493635166 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2', 'NFE2L2|p.S270L|1|0.31|ENSG00000116044|chr2:177231794-177231794|G/A|missense_variant'] 2198 11751 AENNWIEEA True H1975_Epitope_Rep2 1074.4618033263 1074.4607099358602 50.276 2 0.13174322503956473 0.0013598441692087178 0.9438714419765777 ['ENSG00000119661|ENST00000553645|DNAL1', 'nc|ENSG00000119661|Q4LDG9-3|DNAL1', 'nc|ENSG00000119661|Q4LDG9-2|DNAL1'] 113998 19937 TRLPIDVQL True PC9_epitope_Rep5 1053.61824439805 1053.6171499358602 81.742 2 0.13174050212132518 0.0013598441692087178 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 114199 15419 TRVDPLTL True PC9_epitope_Rep1 913.5232813840499 913.52218993586 64.128 2 0.13173879375451555 0.0013598441692087178 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10', 'nc|ENSG00000100065|Q9BWT7-2|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF'] 97784 17310 SHIFEVQAL True PC9_epitope_Rep4 1042.54474510462 1042.54364993586 74.584 2 0.13173867466688652 0.0013598441692087178 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1'] 102657 17240 SQDLVYETV True PC9_epitope_Rep2 1052.50260550912 1052.5015099358602 71.575 2 0.1317344659734973 0.0013598441692087178 0.9438714419765777 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 87856 5528 QVLDTSVAK True NCI_RA007_Epitope_Rep4 959.52876068731 959.52766993586 27.859 2 0.13172481740322603 0.0013598441692087178 0.9438714419765777 ['RESF1|p.E1724Kfs*23|1|0.2|ENSG00000174718|chr12:31992457-31992457|A/-|frameshift_variant', 'ENSG00000174718|ENST00000312561|RESF1'] 21406 20602 ERNDLIVFL True PC9_epitope_Rep4 1117.6131590176099 1117.61206993586 87.4 2 0.13172481427850066 0.0013598441692087178 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1'] 4114 8867 AHTAEVNCL True PC9_epitope_Rep3 956.43856578392 956.43746993586 39.058 2 0.13172352945368443 0.0013598441692087178 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 18622 5516 ELALGQDR True NCI_RA007_Epitope_Rep5 900.46649478392 900.46538993586 27.905 2 0.13172313688406065 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 89738 5190 REYQLNDSA True NCI_RA007_Epitope_Rep4 1094.49925146418 1094.49814993586 26.493 2 0.1317177296046346 0.0013598441692087178 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2', 'GNAO1|p.A165Gfs*37|1|0.24|ENSG00000087258|chr16:56334753-56334754|-/G|frameshift_variant', 'nc|ENSG00000087258|P09471-2|GNAO1', 'ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1', 'ENSG00000065135|ENST00000369851|GNAI3', 'ENSG00000087258|ENST00000262493|GNAO1'] 135511 13744 YEDSGIPLP True H1975_Epitope_Rep3 989.4705771048499 989.47002496793 58.164 1 0.13171642695793018 0.0013598441692087178 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 48958 8860 KEYLQGLEA True H1975_Epitope_Rep2 1049.5393253710097 1049.53822993586 39.048 2 0.1317117016947687 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000475705.1_1_6:32086681-32087735:-|nuORF'] 14005 7670 DRTGTGTLSV True PC9_epitope_Rep6 1005.50908787189 1005.50798993586 38.826 2 0.13170769931139625 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 9877 23138 AYMQEPLFVEF True PC9_epitope_Rep2 1372.6373251601196 1372.63622993586 94.488 2 0.1317056077290702 0.0013598441692087178 0.9438714419765777 ['ENSG00000273611|ENST00000617429|ZNHIT3'] 128360 6268 VSDPSSPQY True H1975_Epitope_Rep3 978.42944056886 978.4288949679301 29.118 1 0.13169687689829002 0.0013598441692087178 0.9438714419765777 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 127124 16702 VQDEFLEKL True PC9_epitope_Rep6 1119.5811901829898 1119.58008993586 76.72 2 0.13168550421851238 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 38814 10825 HIDPNFASL True NCI_RA007_Epitope_Rep3 1012.4977949122 1012.49668993586 49.629 2 0.13168485279286615 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 58276 11456 LETEVPVVA True H1975_Epitope_Rep1 955.5226126777098 955.5220649679301 49.046 1 0.13167917362356588 0.0013598441692087178 0.9438714419765777 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 99175 22351 SLAQYLINV True PC9_epitope_Rep5 1019.5651461960299 1019.5645749679301 90.982 1 0.13167799901519817 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 17851 12587 EIAQEFKTDLR True PC9_epitope_Rep1 1348.6986795467199 1348.6970249037902 53.283 3 0.1316772310969919 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 89828 6720 RFKTQPVTF True NCI_RA007_Epitope_Rep3 1122.6185787512197 1122.61748993586 33.522 2 0.13167155611307252 0.0013598441692087178 0.9438714419765777 ['ENSG00000187479|ENST00000617612|C11orf96', 'nc|nan|Q7Z7L8|C11orf96'] 17786 8476 EHVPNSVRL True PC9_epitope_Rep3 1049.56179215109 1049.5606899358602 37.564 2 0.13166860835212127 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 5760 12201 APEEHPVLL True PC9_epitope_Rep2 1003.5338460677498 1003.53274993586 52.242 2 0.1316680718920306 0.0013598441692087178 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 77026 21405 NVVEQFLQA True PC9_epitope_Rep2 1046.53965972418 1046.53856993586 87.805 2 0.13166378698564896 0.0013598441692087178 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25'] 62288 19148 LLQNNLPAV True PC9_epitope_Rep3 980.5654805492 980.56438993586 78.872 2 0.1316634693898349 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 67584 15452 LTETEDWLY True H1975_Epitope_Rep1 1168.5288202569598 1168.52827496793 64.707 1 0.1316604127521326 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 95390 8625 SAINEVVTR True PC9_epitope_Rep1 987.53490869691 987.53380993586 38.014 2 0.13166002002152397 0.0013598441692087178 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 17669 6384 EHSGLTTGV True PC9_epitope_Rep5 899.43486030247 899.43376993586 29.534 2 0.13165814501857426 0.0013598441692087178 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 54596 10589 LADDSVRSL True PC9_epitope_Rep3 974.50327421546 974.50216993586 45.676 2 0.13165788044170812 0.0013598441692087178 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 83109 17384 PYNPLWAQL True NCI_RA007_Epitope_Rep4 1100.5654805492 1100.5643899358602 75.282 2 0.13165503974473114 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 77190 11385 NYGHVYAVF True NCI_RA007_Epitope_Rep4 1068.5028802926397 1068.5017899358602 50.706 2 0.13164438685336874 0.0013598441692087178 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 4756 5744 ALEEAMEQK True PC9_epitope_Rep4 1047.4906609264297 1047.4895699358601 28.924 2 0.13163435012814365 0.0013598441692087178 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 102160 12762 SPRPPLISV True PC9_epitope_Rep6 964.57056592964 964.56946993586 60.581 2 0.13162818606200097 0.0013598441692087178 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 96153 7772 SEEEFIHINNK True NCI_RA007_Epitope_Rep2 1358.64664397386 1358.6449949037901 34.859 3 0.1316274345805671 0.0013598441692087178 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF'] 97325 3886 SFTTTAER True NCI_RA007_Epitope_Rep4 911.4348603024699 911.43376993586 21.162 2 0.13162384248904288 0.0013598441692087178 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 75769 6105 NRAPNTAEL True PC9_epitope_Rep3 984.4988575413599 984.49776993586 28.531 2 0.13162033957483618 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 59163 11528 LGEYGFQNA True NCI_RA007_Epitope_Rep1 997.4505103666099 997.4499649679301 48.809 1 0.13161866176370118 0.0013598441692087178 0.9438714419765777 ['CON__P02769'] 71313 12148 MHFESGSTL True PC9_epitope_Rep3 1007.43823143075 1007.43712993586 51.768 2 0.13161215552716027 0.0013598441692087178 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF', 'ENST00000570285.1_1_13:76140977-76197422:+|nuORF'] 103924 11086 SRPENAIIY True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 47.53 2 0.1316060777652923 0.0013598441692087178 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 3217 5640 AGEVFIHK True PC9_epitope_Rep1 899.4865019525099 899.48540993586 26.52 2 0.13160384896262634 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000486613.6_1_X:70504267-70513876:+|nuORF', 'ENST00000566277.2_1_16:69791529-69791679:-|nuORF'] 115703 21392 TVLEQVLPI True PC9_epitope_Rep4 1010.6011973515798 1010.60010993586 90.453 2 0.131603270393415 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 1868 13525 AEIGAVTLVSA True H1975_Epitope_Rep2 1029.57062549929 1029.5695299358601 57.16 2 0.13159329527638577 0.0013598441692087178 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 90601 4668 RKKAQEVLL True NCI_RA007_Epitope_Rep4 1083.6764279805097 1083.6753299358602 24.378 2 0.13159255071070008 0.0013598441692087178 0.9438714419765777 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 75825 14967 NRDGNIVFV True PC9_epitope_Rep1 1032.5352430500798 1032.5341499358601 62.391 2 0.131588854562968 0.0013598441692087178 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'NCOA3|p.K620Nfs*18|1|0.15|ENSG00000124151|chr20:47636241-47636241|A/-|frameshift_variant', 'ENST00000497292.1_1_20:46255748-46257319:+|nuORF'] 97954 9225 SHQTGVVAL True PC9_epitope_Rep1 910.4872302284999 910.48612993586 40.336 2 0.13158445316132317 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 34685 17890 GQLPNLQTV True PC9_epitope_Rep2 968.5290950404801 968.52798993586 74.116 2 0.13158378553119984 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 88284 16525 QYGTFCEKF True PC9_epitope_Rep5 1121.4851816231699 1121.48408993586 68.565 2 0.13157476234792648 0.0013598441692087178 0.9438714419765777 ['ENSG00000181523|ENST00000326317|SGSH', 'ENST00000575282.5_1_17:78187814-78194112:-|nuORF', 'ENST00000570923.1_1_17:78185753-78194107:-|nuORF'] 35670 5981 GTMTGM[Oxidation]LYK True NCI_RA007_Epitope_Rep5 1016.46708941132 1016.46598993586 29.689 2 0.13157343569660648 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 113577 18788 TRADLIFTV True PC9_epitope_Rep4 1034.5760452328998 1034.57494993586 80.353 2 0.13156835810296827 0.0013598441692087178 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 42027 8058 IEDVPAPST True H1975_Epitope_Rep3 927.45492704071 927.4543749679301 35.969 1 0.13156431962319323 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF', 'NASP|p.T209Dfs*3|1|0.09|ENSG00000132780|chr1:45607535-45607536|-/G|frameshift_variant'] 105244 5335 STSNSFNLK True NCI_RA007_Epitope_Rep3 996.48762415132 996.48652993586 27.993 2 0.13156216906055476 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 7180 17291 ARDETEFYL True PC9_epitope_Rep1 1142.5244035828598 1142.5233099358602 71.326 2 0.13156089225098838 0.0013598441692087178 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 76153 8482 NRSDPVTL True PC9_epitope_Rep1 900.46649478392 900.46538993586 37.462 2 0.1315579122556901 0.0013598441692087178 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 2531 10205 AEQVPELEA True H1975_Epitope_Rep2 984.4763907612798 984.47528993586 44.259 2 0.13155538443804338 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 5197 20904 ALPPVLTTV True PC9_epitope_Rep5 909.55351888317 909.55242993586 85.463 2 0.1315509051119992 0.0013598441692087178 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 6300 5229 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 25.503 2 0.1315471724971717 0.0013598441692087178 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 35119 6758 GRSEAVVEY True PC9_epitope_Rep4 1008.48762415132 1008.48652993586 33.192 2 0.1315469180009881 0.0013598441692087178 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 92106 10980 RPYEPINSI True PC9_epitope_Rep6 1087.56620882519 1087.5651099358602 53.127 2 0.13152828168191902 0.0013598441692087178 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2', 'GTF3C2|p.A731Cfs*26|1|0.4|ENSG00000115207|chr2:27328533-27328534|-/A|frameshift_variant'] 92107 18666 RPYQPLGALVV True PC9_epitope_Rep4 1211.70264272835 1211.7015499358602 79.876 2 0.13152570614218762 0.0013598441692087178 0.9438714419765777 ['ENSG00000095906|ENST00000262302|NUBP2'] 47651 12942 IYPPKLHQF True PC9_epitope_Rep3 1141.62841515893 1141.62676490379 54.804 3 0.13152444373605998 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 53971 16616 KYKGIFNGF True PC9_epitope_Rep5 1072.5705659296398 1072.56946993586 68.919 2 0.13152310079500454 0.0013598441692087178 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547908.1_1_12:98989476-98991822:+|nuORF'] 29327 16969 FVDRGFYSV True PC9_epitope_Rep1 1088.52909504048 1088.5279899358602 70.095 2 0.13151519674861867 0.0013598441692087178 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 4643 15737 ALATLIHQV True PC9_epitope_Rep2 964.5705659296401 964.56946993586 65.804 2 0.1315079757487036 0.0013598441692087178 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 9014 9874 AVIEAEHTL True PC9_epitope_Rep2 981.5131106231701 981.51200993586 43.315 2 0.1314913801340161 0.0013598441692087178 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'ENST00000436565.2_1_13:77561342-77561690:+|nuORF'] 72373 9645 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4690749679298 42.028 1 0.13148785969399557 0.0013598441692087178 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 74821 15576 NLPDEIYHV True PC9_epitope_Rep6 1098.5345743437401 1098.53346993586 72.121 2 0.1314867165689984 0.0013598441692087178 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 113171 16057 TQDGNIYQL True PC9_epitope_Rep4 1050.4981888350198 1050.49708993586 69.698 2 0.13147795769791207 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 105104 16917 STLNEIYFGK True PC9_epitope_Rep1 1170.5920892198599 1170.59098993586 69.896 2 0.13147607656265736 0.0013598441692087178 0.9438714419765777 ['ENSG00000077549|ENST00000264202|CAPZB', 'nc|ENSG00000077549|P47756-1|CAPZB'] 4418 13292 AIVDKVPSV True PC9_epitope_Rep5 926.54368247546 926.54258993586 56.139 2 0.13147554322587557 0.0013598441692087178 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 38713 7642 HHSNLIAGM True PC9_epitope_Rep2 978.47053461854 978.46942993586 34.763 2 0.1314709422231543 0.0013598441692087178 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 47516 14137 IYLLIHNNF True NCI_RA007_Epitope_Rep5 1145.62332977849 1145.62222993586 61.067 2 0.13146887480503544 0.0013598441692087178 0.9438714419765777 ['ENSG00000143119|ENST00000271324|CD53', 'ENST00000471220.5_1_1:111415857-111435203:+|nuORF', 'ENST00000476408.1_1_1:111422872-111441814:+|nuORF'] 26237 14020 FHYEADGANVL True PC9_epitope_Rep6 1234.5618517207397 1234.56074993586 65.781 2 0.13146626895052246 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 64573 7821 LRDQSAVVV True PC9_epitope_Rep2 985.5556441414899 985.55454993586 35.452 2 0.13146507695109733 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 107081 17540 SYLTSASSL True PC9_epitope_Rep5 927.45492704071 927.4543749679301 72.474 1 0.13146221658605556 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 113376 19245 TQLGPPYHIL True PC9_epitope_Rep1 1137.61824439805 1137.6171499358602 78.826 2 0.131455807820932 0.0013598441692087178 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 96279 6912 SEESPQVVEA True H1975_Epitope_Rep2 1073.48768372097 1073.4865899358601 31.507 2 0.13145408557307792 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 2189 11735 AENELGVVVA True H1975_Epitope_Rep2 999.5236753068698 999.52256993586 50.211 2 0.13145245505444264 0.0013598441692087178 0.9438714419765777 ['ENSG00000171311|ENST00000370902|EXOSC1'] 97986 20125 SHSFVVNIL True PC9_epitope_Rep1 1014.5498304850599 1014.54872993586 82.241 2 0.13144627958862093 0.0013598441692087178 0.9438714419765777 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 4255 23447 AIIEYMPLL True PC9_epitope_Rep5 1061.5831047592899 1061.58200993586 95.172 2 0.1314415244173975 0.0013598441692087178 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 99483 10143 SLEPVAVELK True H1975_Epitope_Rep3 1083.6175756917098 1083.61646993586 44.059 2 0.1314365076089358 0.0013598441692087178 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 94810 18083 RYLSKVLEL True PC9_epitope_Rep5 1119.6651945904698 1119.6640899358601 74.569 2 0.1314349196565177 0.0013598441692087178 0.9438714419765777 ['nc|nan|Q8WUR7-2|C15orf40', 'ENSG00000169609|ENST00000304177|C15orf40', 'nc|nan|Q8WUR7-3|C15orf40', 'ENST00000565725.1_1_15:83677164-83680359:-|nuORF'] 29721 16998 FVPIKVEQI True PC9_epitope_Rep4 1071.63283183303 1071.6317299358602 73.374 2 0.13142092822668835 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 29714 18847 FVPEIFHRI True PC9_epitope_Rep5 1156.6393141958 1156.63765490379 77.512 3 0.13141924550844744 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 67218 11558 LTDLEPATEY True H1975_Epitope_Rep2 1150.5393849406598 1150.53887496793 49.519 1 0.1314166900095437 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 136426 15291 YHGAEIVSL True PC9_epitope_Rep1 987.50254593947 987.50144993586 63.638 2 0.13141446241871133 0.0013598441692087178 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 76348 9306 NSEPETLEY True H1975_Epitope_Rep1 1080.46113461996 1080.46057496793 40.704 1 0.13141394742110948 0.0013598441692087178 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 94281 18611 RWSPVRPLVF True PC9_epitope_Rep4 1255.71896149883 1255.7173049037901 79.663 3 0.1314083949409069 0.0013598441692087178 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 6849 9117 AQIEGGVHGL True PC9_epitope_Rep4 979.50869394907 979.50758993586 42.655 2 0.13140595060527563 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 86800 13894 QRNPQGFVL True PC9_epitope_Rep3 1057.5668775315298 1057.56578993586 58.522 2 0.13140033141853164 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 113388 18962 TQLGPPYHIL True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 77.961 2 0.1313987918120927 0.0013598441692087178 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 3252 5282 AGFAGDDAPR True PC9_epitope_Rep4 975.4410083120698 975.43990993586 27.022 2 0.13139683077534886 0.0013598441692087178 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 40185 11694 HRFPTVAV True PC9_epitope_Rep5 925.5133854066898 925.5122899358599 49.977 2 0.1313894133378553 0.0013598441692087178 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 86351 17620 QQLDSKFLEQV True PC9_epitope_Rep4 1333.68778050985 1333.6866899358602 75.797 2 0.13138218787962386 0.0013598441692087178 0.9438714419765777 ['STAT1|p.D627Tfs*31|1|0.13|ENSG00000115415|chr2:190976999-190977020|AGGGTTCAACCGCATGGAAGTC/-|frameshift_variant', 'nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 38007 7283 HEIEGTGLP True H1975_Epitope_Rep2 951.4661604307499 951.46506993586 32.952 2 0.1313704511324399 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'NIBAN2|p.M44I|1|0.79|ENSG00000136830|chr9:127531702-127531702|C/T|missense_variant'] 138032 5039 YQDPHSTAV True PC9_epitope_Rep1 1016.45632402304 1016.45522993586 24.241 2 0.1313686066307807 0.0013598441692087178 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 113995 19679 TRLPIDVQL True PC9_epitope_Rep2 1053.61824439805 1053.6171499358602 81.082 2 0.1313639069188591 0.0013598441692087178 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 61966 11209 LLLPGELAK True H1975_Epitope_Rep3 952.5957180483199 952.59462993586 48.215 2 0.1313636474488536 0.0013598441692087178 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 17592 17562 EHLQVITTL True PC9_epitope_Rep3 1052.5866099166 1052.58550993586 72.739 2 0.1313498729504355 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 2029 8795 AELDDTPMR True PC9_epitope_Rep5 1046.47025983502 1046.46916993586 38.772 2 0.13133808140952036 0.0013598441692087178 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 40484 11254 HSELLEDYY True H1975_Epitope_Rep1 1167.50841916555 1167.50732993586 48.265 2 0.13133563406844628 0.0013598441692087178 0.9438714419765777 ['ENSG00000117528|ENST00000370214|ABCD3'] 41056 16683 HYIPRAVLL True PC9_epitope_Rep5 1080.64439957624 1080.64330993586 69.174 2 0.13132974290300342 0.0013598441692087178 0.9438714419765777 ['ENSG00000037042|ENST00000251412|TUBG2', 'ENST00000589613.1_1_17:40761741-40762767:+|nuORF', 'ENST00000588056.1_1_17:40761755-40764233:+|nuORF', 'ENST00000588870.1_1_17:40811874-40817754:+|nuORF', 'ENSG00000131462|ENST00000251413|TUBG1', 'ENST00000418303.1_1_7:43958366-43959461:+|nuORF'] 29875 11444 FVYDEPGHAV True PC9_epitope_Rep4 1132.5189242795998 1132.5178299358602 51.787 2 0.13131878612368933 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 18272 6755 EITALAPSTM[Oxidation]K True H1975_Epitope_Rep3 1176.6060254122801 1176.60547496793 30.935 1 0.1313157207249282 0.0013598441692087178 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 56918 7060 LEDRPANLP True H1975_Epitope_Rep1 1023.53490869691 1023.53380993586 32.188 2 0.13131469542186155 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000132405|Q9P2M4-2|TBC1D14', 'ENSG00000132405|ENST00000409757|TBC1D14'] 131055 21282 VVLPLELKL True PC9_epitope_Rep2 1022.6739683690199 1022.6728699358599 87.324 2 0.13130973990380415 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 57123 8048 LEEPKVISA True H1975_Epitope_Rep3 984.54916177872 984.54806993586 35.93 2 0.13130686438164002 0.0013598441692087178 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant', 'HERC2|p.K551Sfs*47|1|0.2|ENSG00000128731|chr15:28265923-28265923|C/-|frameshift_variant'] 111617 5723 TLNQIDSVK True H1975_Epitope_Rep3 1016.5502244078799 1016.54912993586 27.042 2 0.13130581988693407 0.0013598441692087178 0.9438714419765777 ['CON__P12763'] 98831 10350 SITSVFITK True NCI_RA007_Epitope_Rep3 994.5698972233 994.56880993586 47.775 2 0.13130541820672254 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 9193 18378 AVPEIMDRI True PC9_epitope_Rep5 1042.5481162329 1042.5470099358602 75.709 2 0.13129930898242897 0.0013598441692087178 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 85135 10205 QITQINHGL True PC9_epitope_Rep3 1022.5508931142199 1022.5497899358601 44.204 2 0.13129773939606568 0.0013598441692087178 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 28321 12803 FRYTAGTPY True PC9_epitope_Rep5 1074.5134449763398 1074.5123499358601 54.258 2 0.13129317603356166 0.0013598441692087178 0.9438714419765777 ['ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 16497 9296 EENFAVEA True H1975_Epitope_Rep1 907.3923267841499 907.39177496793 40.665 1 0.13129282484022156 0.0013598441692087178 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 107510 8813 TAAPSPLRL True H1975_Epitope_Rep3 924.53926580136 924.53816993586 38.906 2 0.13129028857839076 0.0013598441692087178 0.9438714419765777 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 9799 12177 AYLHTTTTF True PC9_epitope_Rep2 1053.51311062317 1053.51200993586 52.151 2 0.13128803792201438 0.0013598441692087178 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 74574 13607 NLDIIQQEY True H1975_Epitope_Rep1 1134.55570371114 1134.55517496793 57.469 1 0.13128598715545461 0.0013598441692087178 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 25394 20144 FEILPGLSV True H1975_Epitope_Rep3 973.54843350273 973.54732993586 84.274 2 0.13128484086111175 0.0013598441692087178 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 103308 8814 SQTTVYEKL True PC9_epitope_Rep4 1067.54989005471 1067.5487899358602 41.432 2 0.13128164469894715 0.0013598441692087178 0.9438714419765777 ['ENSG00000118193|ENST00000367350|KIF14'] 129185 11144 VTDFPGFDER True NCI_RA007_Epitope_Rep2 1181.5353026197297 1181.5342099358602 47.928 2 0.13128098845110306 0.0013598441692087178 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000513428.5_1_4:122602814-122617744:-|nuORF'] 53711 13469 KYDPNVYSI True PC9_epitope_Rep2 1097.53932537101 1097.53822993586 57.088 2 0.13127210527841845 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 14384 17165 DTEPPPLLVY True H1975_Epitope_Rep2 1142.5859412102598 1142.58537496793 71.305 1 0.13126306051081627 0.0013598441692087178 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 72089 18441 MRDPIRILV True PC9_epitope_Rep1 1111.65358436095 1111.65248993586 75.724 2 0.13126214554724516 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 103645 11954 SRDLSSQLL True PC9_epitope_Rep6 1017.54547338061 1017.54436993586 57.233 2 0.1312604362000947 0.0013598441692087178 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 109689 17929 THEPNFTII True PC9_epitope_Rep5 1070.53965972418 1070.53856993586 73.981 2 0.13125995311508407 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 110043 18224 THYDHVLIEL True PC9_epitope_Rep1 1238.6295373577398 1238.62844993586 74.89 2 0.1312593718946509 0.0013598441692087178 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 93447 6041 RSDPGGGGLAY True H1975_Epitope_Rep3 1048.49377216092 1048.49266993586 28.251 2 0.13125718027454422 0.0013598441692087178 0.9438714419765777 ['ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF'] 127062 17057 VPYPPLLRA True PC9_epitope_Rep4 1024.6069514383598 1024.60584993586 73.605 2 0.1312559942702238 0.0013598441692087178 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 102932 20890 SQIISLQTL True PC9_epitope_Rep2 1001.5757108797301 1001.5746099358599 85.796 2 0.13125082423467543 0.0013598441692087178 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 94565 15927 RYIPTAAAF True PC9_epitope_Rep3 1008.5392658013599 1008.53816993586 66.41 2 0.13124906828707253 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 139921 13189 YVFPGVTRL True H1975_Epitope_Rep2 1050.58621599378 1050.5851099358601 55.857 2 0.13123793866707834 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 130472 17501 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 72.32 2 0.13122556925766427 0.0013598441692087178 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 86248 12449 QPYQPLREV True PC9_epitope_Rep3 1128.5927579261997 1128.5916699358602 52.909 2 0.13122405974376405 0.0013598441692087178 0.9438714419765777 ['ENST00000547003.1_1_12:49916566-49919899:+|nuORF', 'ENST00000549412.5_2_12:49906680-49920035:+|nuORF', 'ENSG00000123352|ENST00000552918|SPATS2'] 103452 15384 SRAGLQFPV True PC9_epitope_Rep2 973.53451477409 973.53340993586 64.456 2 0.13121240548082083 0.0013598441692087178 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC4|p.R30Q|1|0.07|ENSG00000278463|chr6:26033480-26033480|C/T|missense_variant', 'H2AC13|p.R30P|1|0.16|ENSG00000196747|chr6:27808298-27808298|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 94564 14597 RYIPTAAAF True PC9_epitope_Rep2 1008.5392658013599 1008.53816993586 61.416 2 0.13121217549489142 0.0013598441692087178 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 3256 4843 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 26.137 2 0.13120168322290104 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 88221 17424 QYASLMHSF True PC9_epitope_Rep5 1082.48551597634 1082.4844099358602 72.022 2 0.13120087205696068 0.0013727077540389287 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 8185 8141 ATGENLPRV True PC9_epitope_Rep4 955.5086939490699 955.50758993586 38.769 2 0.13119434415381193 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 8151 6700 ATFPDPNVK True NCI_RA007_Epitope_Rep3 987.5025459394699 987.50144993586 33.437 2 0.13119161503889964 0.0013727077540389287 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 106027 20166 SVLNVLHSL True PC9_epitope_Rep2 980.5654805492 980.56438993586 82.981 2 0.13117428454933996 0.0013727077540389287 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 3248 6233 AGFAGDDAPR True PC9_epitope_Rep3 975.4410083120698 975.43990993586 29.012 2 0.13117211983546836 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 42381 5894 IENIQRVAA True H1975_Epitope_Rep2 1012.5665431783599 1012.56544993586 27.657 2 0.13116417320196255 0.0013727077540389287 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 95051 15933 RYSDSTFTF True PC9_epitope_Rep2 1122.49818883502 1122.49708993586 66.534 2 0.13115031772119431 0.0013727077540389287 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 107712 16252 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.5744349679301 70.465 1 0.13114503413985024 0.0013727077540389287 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 132053 19284 VYIHGGGWAL True PC9_epitope_Rep1 1071.5501648382299 1071.5490699358602 78.978 2 0.13114029546319617 0.0013727077540389287 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1'] 95639 12098 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 51.395 2 0.13113871210339065 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 38704 16089 HHSNILLTF True PC9_epitope_Rep2 1080.5716285588 1080.5705299358601 67.143 2 0.13113489143242907 0.0013727077540389287 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 116678 18760 TYIQKIFRM True PC9_epitope_Rep5 1198.65325000778 1198.65160490379 77.171 3 0.1311335565301063 0.0013727077540389287 0.9438714419765777 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 135620 2754 YEEPPQKPP True H1975_Epitope_Rep2 1083.5236753068698 1083.52256993586 14.621 2 0.1311316322331552 0.0013727077540389287 0.9438714419765777 ['ENSG00000064999|ENST00000360359|ANKS1A'] 96725 11217 SEQFETVAV True H1975_Epitope_Rep3 1008.4763907612798 1008.47587496793 48.246 1 0.13113104620561383 0.0013727077540389287 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2', 'TGFBR2|p.K277E|1|0.47|ENSG00000163513|chr3:30672012-30672012|A/G|missense_variant'] 39568 16712 HPIEPVLITA True PC9_epitope_Rep1 1088.62299542532 1088.62188993586 69.11 2 0.13112998879006377 0.0013727077540389287 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 102687 4615 SQDPGTHVV True PC9_epitope_Rep5 938.4457593393399 938.44466993586 22.809 2 0.13112679013660802 0.0013727077540389287 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 1006 6324 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.4179949679301 29.258 1 0.13112473658583565 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 1101 6377 AEAPPGVET True H1975_Epitope_Rep2 869.41306222873 869.4125149679301 29.456 1 0.1311214138488757 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 97962 7436 SHQTGVVAL True PC9_epitope_Rep6 910.4872302284999 910.48612993586 37.832 2 0.13111345832208166 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 98040 14664 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep2 1277.7343370957499 1277.7332299358602 61.672 2 0.1311073896889356 0.0013727077540389287 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 48803 3293 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 17.309 2 0.13110390919038525 0.0013727077540389287 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 103906 13376 SRMDGEGQLTL True PC9_epitope_Rep2 1205.5710365054497 1205.56992993586 56.732 2 0.13110126544746636 0.0013727077540389287 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 130678 14443 VVDEIFNEY True H1975_Epitope_Rep1 1126.51825557326 1126.51767496793 60.751 1 0.13110022721907824 0.0013727077540389287 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 28398 16042 FSDVMEDLY True H1975_Epitope_Rep1 1117.4637774722498 1117.46327496793 67.043 1 0.1310912490558877 0.0013727077540389287 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 37306 12161 GVVPTIQKV True PC9_epitope_Rep2 939.5753169569098 939.57420993586 52.089 2 0.13108807695142452 0.0013727077540389287 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 97891 15209 SHLSDQLTL True PC9_epitope_Rep1 1012.5189242796001 1012.51782993586 63.323 2 0.13108807372965142 0.0013727077540389287 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 113201 9098 TQDPTVTRL True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 39.935 2 0.131082990627082 0.0013727077540389287 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 113425 19714 TQNDIISTL True PC9_epitope_Rep1 1003.51858992643 1003.51748993586 80.655 2 0.13107869682808398 0.0013727077540389287 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 10047 19518 AYVGDLQTL True PC9_epitope_Rep2 978.5022115863 978.5016649679301 80.46 1 0.13107221655515053 0.0013727077540389287 0.9438714419765777 ['ENSG00000065802|ENST00000264607|ASB1'] 114201 13790 TRVDPLTL True PC9_epitope_Rep4 913.5232813840499 913.52218993586 60.939 2 0.13106553390043996 0.0013727077540389287 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10', 'nc|ENSG00000100065|Q9BWT7-2|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF'] 43799 4475 IKIIAPPERK True NCI_RA007_Epitope_Rep5 1163.73902823707 1163.7373949037901 23.864 3 0.13106243572473833 0.0013727077540389287 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 76568 6609 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.46030993586 30.332 2 0.13105829111854833 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 24369 6232 FAEGQGRAL True PC9_epitope_Rep4 947.4824792012298 947.48138993586 31.018 2 0.1310575003994277 0.0013727077540389287 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 76647 12642 NTIESLKDV True PC9_epitope_Rep1 1017.5342399905699 1017.53314993586 53.498 2 0.13105638137541833 0.0013727077540389287 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 55183 8815 LAPEYEAAATR True PC9_epitope_Rep3 1190.59315184902 1190.5920499358601 38.857 2 0.1310535655794702 0.0013727077540389287 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 6673 8724 AQAPDLQRV True PC9_epitope_Rep3 996.5352430500799 996.53414993586 38.509 2 0.13104705958191726 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 63319 22319 LPDIFEAQIA True PC9_epitope_Rep5 1115.58627556343 1115.5851699358602 90.858 2 0.13104275271383092 0.0013727077540389287 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 109583 10377 THDDSHLVSL True PC9_epitope_Rep3 1122.5305515924601 1122.5294499358602 44.857 2 0.131041698579177 0.0013727077540389287 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 103442 11768 SRAEDYEVL True PC9_epitope_Rep2 1080.50875351872 1080.5076499358602 50.598 2 0.13104123743709584 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 96661 10617 SENPSVYVP True H1975_Epitope_Rep3 990.4658260775799 990.4652749679301 45.909 1 0.1310309794738676 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 75033 12314 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 52.45 2 0.1310224133320107 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 108961 7882 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46908993586 35.27 2 0.1310048292946393 0.0013727077540389287 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 27098 20701 FLQEGDLISA True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 84.452 2 0.13099807928260931 0.0013727077540389287 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 99272 20178 SLDDLLTNV True PC9_epitope_Rep6 988.5076908895601 988.50658993586 90.287 2 0.1309979052837133 0.0013727077540389287 0.9438714419765777 ['ENSG00000143819|ENST00000272167|EPHX1'] 34524 6618 GQEDHYNNL True PC9_epitope_Rep3 1088.45230127176 1088.45120993586 30.48 2 0.13098025899458465 0.0013727077540389287 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 95142 7092 SAAAALVLK True NCI_RA007_Epitope_Rep3 842.52255310806 842.52144993586 35.011 2 0.13097841888794007 0.0013727077540389287 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 13934 20523 DRFSDIYAL True PC9_epitope_Rep1 1098.53457434374 1098.53346993586 83.754 2 0.13097809342338476 0.0013727077540389287 0.9438714419765777 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 88277 19132 QYGGDLTNTF True PC9_epitope_Rep1 1114.49310345458 1114.49200993586 78.383 2 0.1309760166162596 0.0013727077540389287 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 140562 21374 YYLNEIQSF True PC9_epitope_Rep5 1175.5498900547097 1175.54937496793 87.276 1 0.1309750845826888 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 75300 19494 NPTLILAA True PC9_epitope_Rep3 811.4803539429099 811.47980496793 80.215 1 0.13096672038622154 0.0013727077540389287 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 94678 11233 RYLEKPMEI True PC9_epitope_Rep2 1177.6165301458898 1177.6154299358602 48.535 2 0.13096501891904797 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 17213 14150 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 62.33 2 0.1309532805139516 0.0013727077540389287 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 123324 10707 VHTIVNETL True PC9_epitope_Rep6 1024.55530978832 1024.5542099358602 51.995 2 0.13094770460693952 0.0013727077540389287 0.9438714419765777 ['ENSG00000023516|ENST00000025301|AKAP11', 'AKAP11|p.S1150Rfs*7|1|0.23|ENSG00000023516|chr13:42302192-42302195|TGTC/-|frameshift_variant'] 31334 11339 GEAIPALAA True H1975_Epitope_Rep3 811.44396843419 811.44341496793 48.726 1 0.13093850762640155 0.0013727077540389287 0.9438714419765777 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 48449 9104 KEEELQAARAL True PC9_epitope_Rep5 1256.67246479888 1256.6713699358602 39.965 2 0.13093812119526446 0.0013727077540389287 0.9438714419765777 ['ENSG00000141519|ENST00000397545|CCDC40', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'nc|ENSG00000141519|Q4G0X9-4|CCDC40', 'nc|ENSG00000141519|Q4G0X9-5|CCDC40'] 21764 11205 ESDEVELSY True H1975_Epitope_Rep1 1069.44515020265 1069.4445749679298 48.069 1 0.13093446629635438 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 114203 13065 TRVDPLTL True PC9_epitope_Rep6 913.5232813840499 913.52218993586 61.862 2 0.13093102241804383 0.0013727077540389287 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10', 'nc|ENSG00000100065|Q9BWT7-2|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF'] 97777 11305 SHHENLVSF True PC9_epitope_Rep3 1068.49885754136 1068.49776993586 48.49 2 0.1309256211072178 0.0013727077540389287 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 65786 10510 LSISETYDLK True NCI_RA007_Epitope_Rep5 1167.6023195503901 1167.6012299358601 47.059 2 0.13091782514621794 0.0013727077540389287 0.9438714419765777 ['CON__P34955'] 2443 3927 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 20.158 2 0.13091591363040037 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 65299 5139 LSEKPPYSKY True H1975_Epitope_Rep3 1210.6233893481399 1210.6217549037901 24.871 3 0.13091512589418075 0.0013727077540389287 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 115632 23216 TVISLLTGL True PC9_epitope_Rep2 915.56408356687 915.5635349679301 94.782 1 0.13091116225863192 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 93801 17851 RVADDVFTL True PC9_epitope_Rep4 1034.53965972418 1034.53856993586 76.701 2 0.1309094599133949 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 70470 16717 LYSEVSHLL True PC9_epitope_Rep6 1059.56006081559 1059.5589699358602 76.777 2 0.13090385756755155 0.0013727077540389287 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 107031 18791 SYLPFTEAF True NCI_RA007_Epitope_Rep5 1073.5069626135698 1073.5058699358601 79.116 2 0.1308986712961044 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 40184 11588 HRFPTVAV True PC9_epitope_Rep5 925.5133854066898 925.5122899358599 49.57 2 0.13089327225114575 0.0013727077540389287 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 113926 20588 TRIGVMSLI True PC9_epitope_Rep5 988.5739370579199 988.57282993586 84.239 2 0.13088663465031128 0.0013727077540389287 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 118911 2743 VEEPSRPSA True H1975_Epitope_Rep3 970.4719740871799 970.47086993586 14.635 2 0.1308856120071622 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'chr12:2868754-2872102|108|24.14|0.02|10.23|-|0|FOXM1,None|1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 1277 5258 AEDRQVSITA True H1975_Epitope_Rep2 1088.5462016566 1088.5451099358602 25.293 2 0.13088543649748413 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 61391 13986 LLENDVSTLGY True H1975_Epitope_Rep1 1222.60813320682 1222.60702993586 58.955 2 0.13088260214648018 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 118624 3817 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 19.7 2 0.13088141693498576 0.0013727077540389287 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 48362 8156 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54806993586 36.322 2 0.13088013919766264 0.0013727077540389287 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 45385 8546 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.4390649679301 37.827 1 0.13087772471035952 0.0013727077540389287 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 97806 13413 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 56.873 2 0.13087389074839356 0.0013727077540389287 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 130435 17500 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 72.108 2 0.13085876041058778 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 120320 16873 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 70.059 2 0.13085759007596448 0.0013727077540389287 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 139251 9732 YTDAALNY True H1975_Epitope_Rep3 929.41306222873 929.4125149679301 42.454 1 0.13084502796187109 0.0013727077540389287 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000497425.1_1_2:166736340-166740450:-|nuORF'] 29277 11780 FVDKNNDLL True PC9_epitope_Rep4 1076.55022440788 1076.54912993586 53.078 2 0.13084448571953314 0.0013727077540389287 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 115302 17141 TVDPASLWEY True H1975_Epitope_Rep3 1179.54480467427 1179.54370993586 71.564 2 0.13084374449013023 0.0013727077540389287 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 40173 17436 HRFPFSSAL True PC9_epitope_Rep1 1060.5454138109599 1060.5443099358602 71.865 2 0.13083784783833274 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 92341 9368 RQPDSGISSI True PC9_epitope_Rep1 1058.5356369729 1058.53452993586 40.891 2 0.1308363300075835 0.0013727077540389287 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 11670 11342 DHDITSQL True PC9_epitope_Rep3 927.42977492203 927.42866993586 48.632 2 0.13083573033011578 0.0013727077540389287 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 4102 9254 AHSPSLQSL True PC9_epitope_Rep4 938.48214484806 938.48104993586 43.194 2 0.13083392575635683 0.0013727077540389287 0.9438714419765777 ['ENSG00000079313|ENST00000170168|REXO1'] 35525 14779 GTIDEIQKL True PC9_epitope_Rep2 1015.5549754351499 1015.55386993586 62.111 2 0.1308281761106286 0.0013727077540389287 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1'] 9401 7355 AVVGVVAGGGR True PC9_epitope_Rep1 940.5454138109598 940.54430993586 33.102 2 0.13082259333844565 0.0013727077540389287 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8'] 138014 22210 YQDELTALL True PC9_epitope_Rep3 1064.5389910178399 1064.5378899358602 90.717 2 0.1308219391626879 0.0013727077540389287 0.9438714419765777 ['ENSG00000129474|ENST00000262713|AJUBA', 'AJUBA|p.G32Rfs*10|1|0.57|ENSG00000129474|chr14:22982162-22982173|CTTGCCCGGCCC/G|frameshift_variant'] 37989 9558 HEGPVWQV True H1975_Epitope_Rep3 950.46101548066 950.45990993586 41.774 2 0.13080895942086604 0.0013727077540389287 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 119970 6303 VEYSEEELK True H1975_Epitope_Rep3 1124.5237348765197 1124.52262993586 29.249 2 0.13080281046313716 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 106827 18556 SYIALPLTL True NCI_RA007_Epitope_Rep3 989.57973363101 989.57862993586 81.19 2 0.13080028467910815 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 84911 13126 QHSVPLQL True PC9_epitope_Rep1 920.50796567308 920.50686993586 55.357 2 0.1307991606450961 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 71063 5934 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 27.811 1 0.1307957195659814 0.0013727077540389287 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 7944 21009 ATDIFSYLVEY True H1975_Epitope_Rep2 1319.62853429823 1319.6274299358602 86.964 2 0.13078407442200576 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A', 'nc|ENSG00000100796|Q6IN85-2|PPP4R3A', 'ENSG00000100796|ENST00000554943|PPP4R3A', 'ENST00000554574.1_1_14:91942052-91948315:-|nuORF', 'nc|ENSG00000100796|Q6IN85-5|PPP4R3A'] 109472 6555 TGVPDRFTGSG True NCI_RA007_Epitope_Rep5 1092.51998690876 1092.5188899358602 31.875 2 0.13077595946974163 0.0013727077540389287 0.9438714419765777 ['CON__Q05B55'] 40929 18730 HVVGLLTTL True PC9_epitope_Rep4 951.5753169569101 951.57420993586 80.126 2 0.13076905928125498 0.0013727077540389287 0.9438714419765777 ['ENSG00000149932|ENST00000279396|TMEM219'] 47106 10299 IVVVTAGVR True PC9_epitope_Rep1 912.5756513100798 912.57454993586 44.5 2 0.1307666079399357 0.0013727077540389287 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 44980 17888 IQIMKVEEI True PC9_epitope_Rep2 1101.61038213629 1101.60928993586 74.109 2 0.13076172980180883 0.0013727077540389287 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 123771 9854 VISLEGKPL True H1975_Epitope_Rep3 954.5749826037398 954.57388993586 42.933 2 0.13076096196355227 0.0013727077540389287 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65622809-65623088:-|nuORF'] 68429 22845 LTTLELLEV True PC9_epitope_Rep5 1029.5957776179698 1029.59527496793 92.868 1 0.13076023469274134 0.0013727077540389287 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 73866 18635 NHFPGSFQI True PC9_epitope_Rep5 1045.49812926537 1045.4970299358602 76.706 2 0.13075019946471855 0.0013727077540389287 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 138281 17706 YQYLLVTAL True NCI_RA007_Epitope_Rep3 1082.60119735158 1082.60010993586 77.632 2 0.13074260299348825 0.0013727077540389287 0.9438714419765777 ['ENSG00000165389|ENST00000298130|SPTSSA'] 75788 11842 NRAQIQAVI True PC9_epitope_Rep1 1011.58252759567 1011.58142993586 50.415 2 0.13073996250349498 0.0013727077540389287 0.9438714419765777 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 74839 6663 NLQDQLPARPS True H1975_Epitope_Rep3 1237.64149902377 1237.6404099358601 30.582 2 0.1307344708356114 0.0013727077540389287 0.9438714419765777 ['ENST00000496239.5_1_1:16782351-16785491:+|nuORF'] 9940 22218 AYQLMTDVF True PC9_epitope_Rep1 1086.50558271458 1086.5044899358602 90.284 2 0.13072401347890475 0.0013727077540389287 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 129221 8923 VTDLAGNEY True H1975_Epitope_Rep2 980.4450906330001 980.44398993586 39.284 2 0.13072292880831843 0.0013727077540389287 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 62783 15914 LMDHTIPEV True PC9_epitope_Rep5 1053.51648175145 1053.5153899358602 66.205 2 0.13072154495771665 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 96419 10941 SEIDQVVPAA True H1975_Epitope_Rep3 1027.5185899264297 1027.51748993586 47.171 2 0.13072079627678462 0.0013727077540389287 0.9438714419765777 ['ENSG00000162607|ENST00000339950|USP1'] 102645 16468 SQDFPGSNL True PC9_epitope_Rep3 963.42977492203 963.42866993586 68.483 2 0.13071244490516737 0.0013727077540389287 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 135732 6545 YEKEGEFVA True H1975_Epitope_Rep2 1070.4920408254197 1070.49094993586 30.086 2 0.13070023957918825 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 84974 11077 QIDPTIQRV True PC9_epitope_Rep1 1068.5927579262 1068.5916699358602 47.496 2 0.13069620837745594 0.0013727077540389287 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q922U2'] 46255 9618 ITDVDNGYY True H1975_Epitope_Rep1 1058.4556553167 1058.45507496793 41.921 1 0.1306932831104039 0.0013727077540389287 0.9438714419765777 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 18291 7812 EITALAPSTM[Oxidation]K True PC9_epitope_Rep6 1176.6060254122801 1176.6049299358601 39.441 2 0.13069193219922842 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 6692 21280 AQAQEVFFL True PC9_epitope_Rep4 1051.53384606775 1051.53274993586 90.021 2 0.13068710458568467 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 120599 11812 VGAGAPVYLAA True H1975_Epitope_Rep3 987.5389314481899 987.53838496793 50.581 1 0.1306820725898587 0.0013727077540389287 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 72254 18836 MRYVASYLLA True PC9_epitope_Rep4 1185.6216155263298 1185.6205099358601 80.54 2 0.13067886329363604 0.0013727077540389287 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 16311 5449 EEISNLKAA True NCI_RA007_Epitope_Rep3 973.5080252427299 973.50692993586 28.446 2 0.1306622846309211 0.0013727077540389287 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000584875.1_1_18:18548690-18549151:-|nuORF'] 84017 5472 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47634993586 26.074 2 0.1306594202671341 0.0013727077540389287 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 47911 22890 IYVPVSLGF True PC9_epitope_Rep1 993.55351888317 993.55242993586 92.843 2 0.13065754230688864 0.0013727077540389287 0.9438714419765777 ['ENSG00000172818|ENST00000335987|OVOL1'] 83726 10445 QEASEAYLV True H1975_Epitope_Rep1 1008.4763907612797 1008.47587496793 45.131 1 0.13065578011871917 0.0013727077540389287 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'H3C13|p.G103R|1|0.12|ENSG00000183598|chr1:149813375-149813375|C/G|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 46612 21571 ITTDVLYTI True PC9_epitope_Rep1 1037.5644774896898 1037.5633899358602 87.793 2 0.13065566870368053 0.0013727077540389287 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 1928 7114 AEINHSFTP True H1975_Epitope_Rep3 1014.47705946762 1014.47596993586 32.334 2 0.13065263258999546 0.0013727077540389287 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 95237 8146 SADETWDSA True NCI_RA007_Epitope_Rep2 980.37231961556 980.37177496793 36.321 1 0.1306503874891637 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 8505 16924 ATVPGLLKV True PC9_epitope_Rep1 896.5695033004799 896.56840993586 69.923 2 0.13064389864667014 0.0013727077540389287 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 106408 18226 SVTFVAEQV True PC9_epitope_Rep5 978.5022115862997 978.50110993586 75.118 2 0.13064357453390507 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 57032 14456 LEEESVFAV True H1975_Epitope_Rep2 1021.4967918526899 1021.49568993586 60.761 2 0.13063734206026598 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 21182 13605 EREQVIAAL True PC9_epitope_Rep5 1027.5662088251897 1027.5651099358602 57.354 2 0.13063637522087798 0.0013727077540389287 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 96446 10875 SEILYSAPP True H1975_Epitope_Rep1 975.49131254943 975.4907649679301 46.79 1 0.13063436460302907 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 97935 9533 SHQGDYAVL True PC9_epitope_Rep2 988.4614094034798 988.46030993586 42.015 2 0.1306301517477693 0.0013727077540389287 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT'] 63933 15579 LPWQGLKAA True PC9_epitope_Rep2 982.5600012459398 982.55890993586 65.199 2 0.13062816845231914 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 62173 12280 LLPHVVPGTT True PC9_epitope_Rep6 1032.59678067748 1032.59568993586 58.621 2 0.13062583868877356 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 34798 6005 GQTGVIRSV True PC9_epitope_Rep4 915.5137793295099 915.51268993586 30.07 2 0.13062325051260076 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 84615 4957 QHDPSAVAV True PC9_epitope_Rep4 922.4508447197799 922.44974993586 25.669 2 0.13061796141666726 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 20620 8106 EQEVNILK True PC9_epitope_Rep6 971.5287606873098 971.52766993586 40.708 2 0.13061624282777146 0.0013727077540389287 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 1560 5424 AEFAERSVA True H1975_Epitope_Rep3 978.4770594676199 978.47596993586 25.922 2 0.13061274427442643 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM3|p.K249N|1|0.07|ENSG00000143549|chr1:154170428-154170428|C/G|missense_variant', 'ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 88900 6235 REAQSLISA True H1975_Epitope_Rep3 973.5192586327698 973.51816993586 28.995 2 0.1306113262988979 0.0013727077540389287 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 33178 6497 GKTVISQSL True NCI_RA007_Epitope_Rep5 931.5338460677499 931.53274993586 31.657 2 0.13060045756784766 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 26248 17342 FHYPGVQNL True PC9_epitope_Rep1 1073.52942939365 1073.52832993586 71.52 2 0.13059463171252816 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000085433|O94967-2|WDR47', 'ENSG00000085433|ENST00000369962|WDR47', 'nc|ENSG00000085433|O94967-3|WDR47', 'nc|ENSG00000085433|O94967-4|WDR47'] 85048 19588 QILDGVHYL True PC9_epitope_Rep1 1056.5603951687601 1056.55928993586 80.172 2 0.13058866471235167 0.0013727077540389287 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 98860 21610 SIVDFLITA True PC9_epitope_Rep6 977.5433481222899 977.54224993586 96.001 2 0.1305848136014022 0.0013727077540389287 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 113581 8946 TRADTTTIL True PC9_epitope_Rep2 990.53457434374 990.53346993586 39.768 2 0.1305809898767832 0.0013727077540389287 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 1620 7025 AEFVEVTK True NCI_RA007_Epitope_Rep2 921.4807478657299 921.47964993586 31.948 2 0.13057897596821516 0.0013727077540389287 0.9438714419765777 ['CON__P02769'] 37746 10583 HAVGDIPGV True PC9_epitope_Rep4 863.45011644379 863.44900993586 48.448 2 0.13057786667019922 0.0013727077540389287 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 72063 20050 MRASSFLIV True PC9_epitope_Rep3 1022.5582869937799 1022.55718993586 82.372 2 0.1305735247362905 0.0013727077540389287 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 77033 16870 NVVMVNQGL True PC9_epitope_Rep1 972.5062514209199 972.50514993586 69.715 2 0.13055835569066054 0.0013727077540389287 0.9438714419765777 ['ENSG00000134057|ENST00000256442|CCNB1'] 104292 14565 SSEELPLYY True H1975_Epitope_Rep3 1099.5073565363898 1099.50677496793 61.392 1 0.1305565293526892 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 42064 4532 IEEELGSK True NCI_RA007_Epitope_Rep2 903.4549270407099 903.45382993586 22.256 2 0.1305535429796046 0.0013727077540389287 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 21574 5562 ERSGVNSEL True PC9_epitope_Rep1 989.47778774361 989.47668993586 26.224 2 0.13055176681364172 0.0013727077540389287 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 91583 14478 RPAQPTLWTA True PC9_epitope_Rep3 1139.60874234351 1139.60764993586 60.798 2 0.13054814982885604 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 138136 9205 YQLDQDHNV True PC9_epitope_Rep5 1130.49925146418 1130.49814993586 40.354 2 0.13053604923250878 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'RSF1|p.K386Nfs*6|1|0.19|ENSG00000048649|chr11:77702071-77702071|T/-|frameshift_variant', 'ENST00000534794.1_1_11:77413524-77475723:-|nuORF'] 3240 5055 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 24.816 2 0.13052454461178983 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 60074 14945 LHSLGSVSL True PC9_epitope_Rep5 911.50763131991 911.50652993586 62.488 2 0.1305241511641641 0.0013727077540389287 0.9438714419765777 ['TNS4-CCR7|1|fusion', 'ENSG00000131746|ENST00000254051|TNS4'] 27454 14431 FNPFVTSDR True PC9_epitope_Rep2 1081.51925863277 1081.5181699358602 60.777 2 0.13051285297318305 0.0013727077540389287 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 21555 18042 ERSDTFINL True PC9_epitope_Rep1 1093.54038800017 1093.53928993586 74.191 2 0.130508667035671 0.0013727077540389287 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 9473 3813 AVYDRPGASPK True NCI_RA007_Epitope_Rep2 1159.5985715826298 1159.59691490379 19.465 3 0.13050650019468527 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 103485 5291 SRAPSVATV True PC9_epitope_Rep4 886.4872302285 886.48612993586 27.056 2 0.13050108587466866 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 73819 11123 NHDTGEYVL True PC9_epitope_Rep5 1046.46688870674 1046.46637496793 47.774 1 0.13049901912120462 0.0013727077540389287 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 135454 5243 YEAPGVREA True H1975_Epitope_Rep3 990.4770594676198 990.47596993586 25.252 2 0.13049900486373864 0.0013727077540389287 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 71195 11713 M[Oxidation]FLSFPTTK True NCI_RA007_Epitope_Rep4 1086.54196860374 1086.5408699358602 52.022 2 0.1304983440673234 0.0013727077540389287 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 85077 19287 QIPQVLNQV True PC9_epitope_Rep2 1037.58694426977 1037.58584993586 79.562 2 0.13049334085956737 0.0013727077540389287 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 67155 13022 LTDEQLLY True H1975_Epitope_Rep2 993.50187723313 993.50132496793 55.208 1 0.1304902478484057 0.0013727077540389287 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R'] 57336 5380 LEGSPSPEA True H1975_Epitope_Rep3 885.40797684829 885.4074249679301 25.761 1 0.13048932468482172 0.0013727077540389287 0.9438714419765777 ['ENSG00000170871|ENST00000307659|KIAA0232'] 127542 20127 VQVPVPVTV True PC9_epitope_Rep1 936.5644179200399 936.56332993586 82.248 2 0.13048598072090128 0.0013727077540389287 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 86588 9944 QRDETALQL True PC9_epitope_Rep6 1072.5512870370399 1072.55018993586 48.778 2 0.13048444914182689 0.0013727077540389287 0.9438714419765777 ['TRIP11|p.S1808Afs*25|2|0.16|ENSG00000100815|chr14:91975208-91975208|C/-|frameshift_variant', 'nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 78169 5836 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 29.935 2 0.13047166885501224 0.0013727077540389287 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 14048 8714 DSDFRKDDFY True H1975_Epitope_Rep2 1306.5465955794198 1306.54495490379 38.479 3 0.13046908483573258 0.0013727077540389287 0.9438714419765777 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 11940 14662 DHSPDSLPL True PC9_epitope_Rep1 979.46107505031 979.45996993586 61.218 2 0.1304683929472781 0.0013727077540389287 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 2642 8261 AESSFSQEV True H1975_Epitope_Rep3 982.4243551884199 982.42324993586 36.762 2 0.13046604911305054 0.0013727077540389287 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR'] 43833 19982 IKYPENFFLL True PC9_epitope_Rep6 1282.6961603655798 1282.6950699358601 89.525 2 0.1304616157225631 0.0013727077540389287 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 106736 18653 SYDPDFNQL True PC9_epitope_Rep4 1097.46655435357 1097.46597496793 79.825 1 0.13045892008305907 0.0013727077540389287 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 138586 17563 YRPPEVIL True PC9_epitope_Rep3 985.5596668927699 985.55856993586 72.743 2 0.13044690815073962 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'ENST00000569406.5_1_15:74914809-74922221:+|nuORF', 'ENST00000562078.5_1_15:74917060-74922221:+|nuORF', 'ENST00000454830.6_1_15:74914310-74922221:+|nuORF'] 53927 4797 KYIQRQETI True NCI_RA007_Epitope_Rep4 1177.64552177505 1177.64386490379 24.888 3 0.13042835489590232 0.0013727077540389287 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 11915 12959 DHSGQVTIL True PC9_epitope_Rep1 968.49270953176 968.49160993586 54.719 2 0.13042772635800307 0.0013727077540389287 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 90484 4264 RKAALEQDL True NCI_RA007_Epitope_Rep3 1042.5771078620598 1042.5760099358602 23.468 2 0.1304273062002876 0.0013727077540389287 0.9438714419765777 ['ENSG00000100292|ENST00000216117|HMOX1'] 1003 8674 AEAEPPLPA True H1975_Epitope_Rep1 893.4494477374499 893.4488949679301 38.294 1 0.13042216839115842 0.0013727077540389287 0.9438714419765777 ['ENST00000532687.5_1_11:33061130-33065300:+|nuORF'] 76531 9191 NTDNNLAVY True H1975_Epitope_Rep2 1022.4668887067398 1022.46578993586 40.306 2 0.13041207491735454 0.0013727077540389287 0.9438714419765777 ['ENSG00000204019|ENST00000371894|CT83', 'CT83|p.D61Y|1|0.75|ENSG00000204019|chrX:116461902-116461902|C/A|missense_variant'] 87905 13799 QVMQGMGVSA True PC9_epitope_Rep5 1006.4575869763398 1006.45707496793 58.097 1 0.13041105849562978 0.0013727077540389287 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 132525 12192 VYPGDPLRF True NCI_RA007_Epitope_Rep3 1062.5498304850598 1062.5487299358601 55.088 2 0.13041092819768144 0.0013727077540389287 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 94831 20096 RYLTVATVF True PC9_epitope_Rep1 1068.59678067748 1068.59568993586 82.127 2 0.13039930967062804 0.0013727077540389287 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 104325 12423 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45284993586 52.871 2 0.13039184416887276 0.0013727077540389287 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 21293 17350 ERIQDYDVSL True PC9_epitope_Rep3 1236.5986311522797 1236.5975299358602 71.908 2 0.1303826194881408 0.0013727077540389287 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 59868 16655 LHGNIITSL True PC9_epitope_Rep5 966.54983048506 966.54872993586 69.069 2 0.13037820513614887 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF', 'CEP97|p.V352Lfs*3|1|0.33|ENSG00000182504|chr3:101757658-101757658|G/-|frameshift_variant'] 89035 7692 REEEVTGPVIA True H1975_Epitope_Rep2 1198.61936659686 1198.61826993586 34.54 2 0.13037662347123924 0.0013727077540389287 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 114893 17125 TTEFLYNLY True H1975_Epitope_Rep1 1162.5546410819798 1162.5540749679299 71.307 1 0.13036917574636625 0.0013727077540389287 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF', 'ENST00000474114.5_1_21:45744937-45745285:+|nuORF', 'ENST00000495274.1_1_21:45742848-45745285:+|nuORF'] 7535 2609 ASFDKAKLK True NCI_RA007_Epitope_Rep3 1006.58113061334 1006.58002993586 14.732 2 0.13036483667870205 0.0013727077540389287 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 138733 7304 YSADREDLY True H1975_Epitope_Rep2 1130.48801807414 1130.48747496793 33.032 1 0.13036422415031915 0.0013727077540389287 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 139923 12915 YVFPGVTRL True H1975_Epitope_Rep3 1050.58621599378 1050.5851099358601 54.905 2 0.1303584887100749 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 97908 6167 SHMEGVASV True PC9_epitope_Rep4 915.4120166829099 915.41090993586 30.751 2 0.13035453941197547 0.0013727077540389287 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 23679 18583 EYGVIRDVL True PC9_epitope_Rep2 1062.57095985246 1062.5698699358602 76.832 2 0.13035321330211727 0.0013727077540389287 0.9438714419765777 ['ENSG00000049239|ENST00000377403|H6PD', 'nc|ENSG00000049239|O95479-2|H6PD'] 21668 15415 ERVPINDVL True PC9_epitope_Rep2 1053.58185888933 1053.5807699358602 64.573 2 0.13034834367362028 0.0013727077540389287 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 89175 10557 REIDDYIVQA True H1975_Epitope_Rep2 1220.6037165327198 1220.60317496793 45.628 1 0.13034721242751973 0.0013727077540389287 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 71149 4007 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep3 1073.5063113710098 1073.5052099358602 20.538 2 0.13034651784635587 0.0013727077540389287 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 48371 8393 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54861496793 37.267 1 0.13033958142005886 0.0013727077540389287 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 75400 21217 NQFNSFISV True PC9_epitope_Rep5 1054.5083595959 1054.5072699358602 86.659 2 0.13033896328246117 0.0013727077540389287 0.9438714419765777 ['ENSG00000136021|ENST00000360820|SCYL2'] 116436 15638 TWTEVSYTF True NCI_RA007_Epitope_Rep4 1132.5076908895599 1132.5065899358601 67.928 2 0.13033317911729878 0.0013727077540389287 0.9438714419765777 ['ENSG00000116663|ENST00000376753|FBXO6'] 136612 13336 YIDAQFEAY True H1975_Epitope_Rep2 1118.49204082542 1118.49094993586 56.429 2 0.13032762794708339 0.0013727077540389287 0.9438714419765777 ['ENSG00000154997|ENST00000388975|SEPTIN14', 'nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11'] 14830 17192 DYEAGHLSF True PC9_epitope_Rep5 1037.4454249861699 1037.4443299358602 71.149 2 0.13032173115300053 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000154370|Q96F44-3|TRIM11', 'ENSG00000154370|ENST00000284551|TRIM11'] 13155 10739 DLSTIEPLK True H1975_Epitope_Rep3 1014.5597264624199 1014.55862993586 46.386 2 0.13032153509226516 0.0013727077540389287 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENSG00000139223|ENST00000266594|ANP32D', 'nc|ENSG00000248546|O43423|ANP32CP'] 69495 11166 LVSESSDVLPK True PC9_epitope_Rep5 1172.6288686514001 1172.6277699358602 47.936 2 0.1303189216512343 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 69212 11285 LVNELTEFAK True H1975_Epitope_Rep3 1162.6233893481399 1162.6228749679299 48.514 1 0.13031564381501512 0.0013727077540389287 0.9438714419765777 ['CON__P02769'] 52344 11668 KPFGQVIST True PC9_epitope_Rep3 975.5389314481899 975.53782993586 49.899 2 0.13031560834278394 0.0013727077540389287 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 95984 12107 SEAEIFYNA True H1975_Epitope_Rep3 1042.46074069714 1042.46017496793 51.735 1 0.13030766900308882 0.0013727077540389287 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 98511 20326 SILGKFAVV True PC9_epitope_Rep1 932.5695033004798 932.56840993586 83.014 2 0.13028821848640348 0.0013727077540389287 0.9438714419765777 ['DHRS1-METTL3|1|fusion', 'ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 68783 13036 LVDPSVYGY True H1975_Epitope_Rep1 1011.49131254943 1011.4907749679301 55.228 1 0.1302866332736278 0.0013727077540389287 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 6070 14822 APMPPIIHA True PC9_epitope_Rep3 945.51060852537 945.50950993586 62.149 2 0.1302830319772173 0.0013727077540389287 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 132852 22511 VYTPVDSLVF True PC9_epitope_Rep3 1138.5910265906998 1138.58992993586 91.865 2 0.13027882654370215 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'KDM2B|p.I399Mfs*82|1|0.34|ENSG00000089094|chr12:121510014-121510017|GTCT/-|frameshift_variant', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 42458 15046 IEQPTPFLP True H1975_Epitope_Rep2 1040.5542471591598 1040.5531499358601 63.026 2 0.1302695251614134 0.0013727077540389287 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 28837 21130 FTDLFDYL True H1975_Epitope_Rep1 1032.4804135125598 1032.4798749679298 87.778 1 0.13026707337658283 0.0013727077540389287 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'PPP2CA|p.T156A|1|0.32|ENSG00000113575|chr5:134201868-134201868|T/C|missense_variant', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 116797 21581 TYLPTSPLL True PC9_epitope_Rep1 1003.55899818643 1003.55847496793 87.834 1 0.13025809792345805 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 47210 17083 IYASVRTLL True PC9_epitope_Rep4 1034.6124307416198 1034.61132993586 73.706 2 0.13024968193993605 0.0013727077540389287 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 1090 7592 AEAPPAYTP True H1975_Epitope_Rep1 915.4337976733101 915.43270993586 34.196 2 0.13024949123486468 0.0013727077540389287 0.9438714419765777 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 8862 14219 AVFPSIVGRPR True PC9_epitope_Rep3 1197.69822605425 1197.6965849037902 59.779 3 0.13024354671927119 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 16501 9507 EENFAVEA True H1975_Epitope_Rep2 907.3923267841499 907.39177496793 41.538 1 0.13023927955615913 0.0013727077540389287 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 113696 7242 TRDETNYGI True PC9_epitope_Rep6 1067.4883524273098 1067.48724993586 36.98 2 0.13023625200135827 0.0013727077540389287 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 94093 3598 RVYGGLTTK True NCI_RA007_Epitope_Rep3 993.5607295219299 993.55962993586 20.024 2 0.1302347263203417 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 21612 15373 ERSPLDQVL True PC9_epitope_Rep6 1055.56112344475 1055.56002993586 71.279 2 0.1302343610070459 0.0013727077540389287 0.9438714419765777 ['ENSG00000168994|ENST00000380283|PXDC1'] 57053 5877 LEEGSVEA True H1975_Epitope_Rep3 832.3814277472799 832.38087496793 27.617 1 0.1302335696073108 0.0013727077540389287 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 9497 9790 AWAPKPYHKF True PC9_epitope_Rep5 1243.6502132326698 1243.64857490379 42.626 3 0.13023086555851898 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 45048 5656 IQNPTMINK True NCI_RA007_Epitope_Rep3 1057.55901526977 1057.5579099358602 29.234 2 0.13022886279220566 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 8437 4565 ATSAPLVSR True NCI_RA007_Epitope_Rep4 900.50288029264 900.50178993586 23.961 2 0.13022067701617332 0.0013727077540389287 0.9438714419765777 ['ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1', 'ENST00000497509.1_1_22:46926386-46930076:-|nuORF', 'ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 139421 13575 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep1 1147.5107280451098 1147.5096299358602 57.343 2 0.1302171406637831 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 4743 8887 ALEAVFGK True H1975_Epitope_Rep3 833.4647038787699 833.46360993586 39.185 2 0.1301941904007736 0.0013727077540389287 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'nc|ENSG00000147274|P38159-3|RBMX', 'ENST00000565907.1_1_X:135961433-135961586:-|nuORF'] 118907 5213 VEEPSNPEA True H1975_Epitope_Rep3 970.4243551884199 970.4238049679301 25.138 1 0.1301939661497421 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 126046 13243 VPAPSPLSA True PC9_epitope_Rep5 837.45961849833 837.4590749679301 55.949 1 0.13018847059793723 0.0013727077540389287 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 95670 7528 SAVTSVAKV True PC9_epitope_Rep1 860.4967322830399 860.49562993586 33.774 2 0.13018744860235157 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27', 'IFI27|p.S8L|1|0.19|ENSG00000165949|chr14:94111705-94111705|C/T|missense_variant'] 61969 11386 LLLPGELAK True NCI_RA007_Epitope_Rep4 952.5957180483199 952.59462993586 50.709 2 0.13018739246441444 0.0013727077540389287 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 2817 6413 AEVGGSPEV True H1975_Epitope_Rep2 843.3974121645899 843.39686496793 29.592 1 0.13018543227537158 0.0013727077540389287 0.9438714419765777 ['ENST00000489142.5_1_10:114207101-114244859:+|nuORF', 'ENST00000357585.3_2_17:71167612-71167879:+|nuORF'] 133043 17906 VYVSDIQEL True PC9_epitope_Rep6 1064.5389910178399 1064.5378899358602 81.499 2 0.13017717017258218 0.0013727077540389287 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 72278 14307 MSDSYLPSYY True H1975_Epitope_Rep3 1224.5008912569601 1224.50037496793 60.378 1 0.13017710555460588 0.0013727077540389287 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 137127 15965 YLDIGQVYY True H1975_Epitope_Rep1 1132.54407639828 1132.54357496793 66.726 1 0.130174509863549 0.0013727077540389287 0.9438714419765777 ['ENSG00000006555|ENST00000371276|TTC22'] 106830 19328 SYIALPLTL True NCI_RA007_Epitope_Rep5 989.57973363101 989.57918496793 81.223 1 0.13017434293289876 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 20967 11924 ERADALQL True PC9_epitope_Rep1 914.48214484806 914.48104993586 50.731 2 0.13016659305824727 0.0013727077540389287 0.9438714419765777 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 120338 14325 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 66.999 2 0.1301628826329859 0.0013727077540389287 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 116233 21155 TVTTVILEV True PC9_epitope_Rep5 973.5695628701299 973.56901496793 86.425 1 0.1301536097133583 0.0013727077540389287 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 34640 18974 GQISEVVVV True PC9_epitope_Rep1 928.5229470308799 928.52184993586 77.769 2 0.13015099531018498 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 4412 12846 AIVDKVPSV True PC9_epitope_Rep2 926.54368247546 926.54258993586 54.712 2 0.13014970730493344 0.0013727077540389287 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 6331 5821 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 29.252 2 0.13014589745400484 0.0013727077540389287 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 98514 20258 SILGKFAVV True PC9_epitope_Rep5 932.5695033004798 932.56840993586 82.972 2 0.13013996571157138 0.0013727077540389287 0.9438714419765777 ['DHRS1-METTL3|1|fusion', 'ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 59831 14622 LHDSSDYLL True PC9_epitope_Rep2 1061.50293986229 1061.50184993586 61.512 2 0.13013723097197838 0.0013727077540389287 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2', 'ENST00000482825.7_1_1:150939531-150940017:-|nuORF', 'ENST00000558501.5_1_19:8275630-8321979:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF'] 99628 20690 SLFRVITEV True PC9_epitope_Rep5 1062.60734536118 1062.6062499358602 84.639 2 0.1301344507978421 0.0013727077540389287 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 35216 4668 GSGTAEVELK True H1975_Epitope_Rep1 989.50293986229 989.50184993586 22.989 2 0.1301296195209173 0.0013727077540389287 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 24040 15256 EYQDLLNVK True PC9_epitope_Rep2 1120.5764391557198 1120.57534993586 63.956 2 0.130125164356223 0.0013727077540389287 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 105431 13874 SVALVIHNV True PC9_epitope_Rep2 950.5549158655001 950.55380993586 58.648 2 0.13011462078816224 0.0013727077540389287 0.9438714419765777 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2'] 8156 9421 ATFPLSVQK True NCI_RA007_Epitope_Rep2 989.55458151233 989.55348993586 41.257 2 0.1301144510999716 0.0013727077540389287 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 138566 17468 YRPETGSWVF True PC9_epitope_Rep6 1240.58767254576 1240.58656993586 79.814 2 0.13010835311141478 0.0013727077540389287 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 73943 12770 NHLGGGAVVL True PC9_epitope_Rep3 935.51886470995 935.51776993586 54.141 2 0.13010488186771277 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 113350 5610 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.54912993586 29.06 2 0.1301020252334464 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 75745 16350 NRADGNFLL True PC9_epitope_Rep1 1018.51959298594 1018.51848993586 67.711 2 0.1300987135878652 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 18336 19070 EIVTTIPTI True PC9_epitope_Rep6 985.56956287013 985.56846993586 85.996 2 0.13009470739944168 0.0013727077540389287 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 106321 6224 SVSAVNLPK True NCI_RA007_Epitope_Rep3 913.5232813840499 913.52218993586 31.487 2 0.1300925160454591 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1'] 72917 16899 NAYTGIVLL True H1975_Epitope_Rep2 962.54368247546 962.5431349679301 70.249 1 0.13008567633139784 0.0013727077540389287 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 9556 20491 AYALLSHFL True PC9_epitope_Rep4 1033.5596668927699 1033.55856993586 86.967 2 0.13008551430539447 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 28703 16560 FSTTVIQNV True PC9_epitope_Rep6 1007.5287606873098 1007.52766993586 76.136 2 0.13007900216362728 0.0013727077540389287 0.9438714419765777 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.T122Ifs*2|1|0.21|ENSG00000100554|chr14:67345856-67345859|CCAG/-|frameshift_variant'] 92464 12255 RQYFQEIGL True NCI_RA007_Epitope_Rep3 1152.5927579262 1152.5916699358602 55.353 2 0.13007184804391625 0.0013727077540389287 0.9438714419765777 ['ENSG00000110328|ENST00000227756|GALNT18'] 4270 22985 AIIPYIPTL True PC9_epitope_Rep2 999.60046907559 999.59936993586 93.906 2 0.13005499993899508 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 102994 17232 SQISDTSVVL True PC9_epitope_Rep4 1047.5448046742702 1047.54427496793 74.291 1 0.13004516547363115 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 11932 12197 DHSNLIRSL True PC9_epitope_Rep3 1053.5567067706502 1053.55560993586 51.948 2 0.13004360488956698 0.0013727077540389287 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2'] 98838 6706 SITTVQIQK True NCI_RA007_Epitope_Rep1 1016.5866099166 1016.58550993586 30.094 2 0.13003645640230013 0.0013727077540389287 0.9438714419765777 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 89676 5009 REVQGFESA True NCI_RA007_Epitope_Rep3 1021.4828731240499 1021.48176993586 26.7 2 0.1300303891471124 0.0013727077540389287 0.9438714419765777 ['ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14'] 109615 16063 THDGGFLSL True PC9_epitope_Rep6 945.45559574705 945.45448993586 74.111 2 0.13002520986950064 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 7665 4771 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep2 990.4618036426001 990.46070993586 23.721 2 0.13002488355210037 0.0013727077540389287 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 65119 10377 LSDPGSGLY True H1975_Epitope_Rep3 907.4287122928699 907.42816496793 44.971 1 0.13002225259753233 0.0013727077540389287 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 133524 14192 WHHTFYNEL True PC9_epitope_Rep2 1245.55670677065 1245.55560993586 59.857 2 0.13001896758245435 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 135453 5276 YEAPGVREA True H1975_Epitope_Rep2 990.4770594676198 990.47596993586 25.357 2 0.13001112847133992 0.0013727077540389287 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 74233 12155 NIDPITM[Oxidation]AY True H1975_Epitope_Rep3 1052.48484765044 1052.48374993586 51.924 2 0.13000451995760587 0.0013727077540389287 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 120304 16132 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 66.868 2 0.12999756545318467 0.0013727077540389287 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 83684 10478 QEALSALTA True H1975_Epitope_Rep1 902.4709114580199 902.46980993586 45.259 2 0.12999445192361417 0.0013727077540389287 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 6269 9483 APRPTIINA True PC9_epitope_Rep1 951.5501648382299 951.54906993586 41.333 2 0.12999054465115478 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 88666 6941 RAYADEVAV True NCI_RA007_Epitope_Rep5 992.4927095317598 992.49160993586 33.383 2 0.129989461280006 0.0013727077540389287 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 27823 19968 FQIIQSIRMGM True PC9_epitope_Rep4 1322.6838985130598 1322.6828099358602 84.94 2 0.12998340568344754 0.0013727077540389287 0.9438714419765777 ['ENSG00000120742|ENST00000239944|SERP1', 'ENSG00000151778|ENST00000379179|SERP2'] 48532 11867 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 52.303 2 0.1299571690085976 0.0013727077540389287 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 75653 19450 NQSELAVLL True PC9_epitope_Rep6 985.5444107514498 985.5438649679301 87.478 1 0.12995465142986187 0.0013727077540389287 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 9881 20125 AYNDNWFITF True NCI_RA007_Epitope_Rep4 1289.57168812845 1289.5705899358602 87.071 2 0.12995453535475326 0.0013727077540389287 0.9438714419765777 ['ENSG00000107929|ENST00000316157|LARP4B', 'LARP4B|p.S572Lfs*24|1|0.11|ENSG00000107929|chr10:815015-815052|GGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCT/-|frameshift_variant'] 102989 18024 SQISDTSVVL True PC9_epitope_Rep2 1047.5448046742702 1047.54370993586 74.634 2 0.1299508121490658 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 75974 13357 NRHEIAVML True PC9_epitope_Rep5 1081.57024865981 1081.5691499358602 56.392 2 0.12994425667042886 0.0013727077540389287 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10', 'nc|ENSG00000101843|O75832-2|PSMD10'] 115701 22107 TVLEQVLPI True PC9_epitope_Rep2 1010.6011973515798 1010.6006749679301 90.509 1 0.12994425344488714 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 61160 10672 LLDIRSEY True H1975_Epitope_Rep2 1007.5287606873101 1007.52766993586 46.075 2 0.12994319889104863 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 106361 5971 SVSNVVITK True NCI_RA007_Epitope_Rep2 945.54949613189 945.54838993586 27.835 2 0.12994301226150992 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 112203 15107 TLVYHVVGV True PC9_epitope_Rep4 985.5596668927699 985.55856993586 66.038 2 0.12994243003133485 0.0013727077540389287 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 102756 5024 SQEGRPVQV True PC9_epitope_Rep3 998.5145076054997 998.51340993586 24.415 2 0.12993503494977118 0.0013727077540389287 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 4745 12998 ALEAVFGK True PC9_epitope_Rep1 833.4647038787699 833.46360993586 54.867 2 0.1299344971892159 0.0013727077540389287 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'nc|ENSG00000147274|P38159-3|RBMX', 'ENST00000565907.1_1_X:135961433-135961586:-|nuORF'] 130416 11367 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 50.637 2 0.12993385102041874 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 129179 9811 VTDESIPSY True H1975_Epitope_Rep3 1009.4604063439699 1009.4598749679301 42.764 1 0.12992947210028413 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant'] 99268 22200 SLDDLLTNV True PC9_epitope_Rep3 988.5076908895601 988.50658993586 90.678 2 0.12992736984951175 0.0013727077540389287 0.9438714419765777 ['ENSG00000143819|ENST00000272167|EPHX1'] 17396 12553 EHFNGVAEL True PC9_epitope_Rep4 1014.4770594676198 1014.47596993586 56.106 2 0.12991852185608785 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5A|p.E251Q|1|0.1|ENSG00000066027|chr1:212347393-212347393|G/C|missense_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E'] 29330 15285 FVDRGFYSV True PC9_epitope_Rep4 1088.52909504048 1088.5279899358602 66.723 2 0.1299163021781858 0.0013727077540389287 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 84117 18113 QEQLLAILP True H1975_Epitope_Rep2 1023.5964463243098 1023.5953499358601 75.061 2 0.12989866891129154 0.0013727077540389287 0.9438714419765777 ['ENSG00000171222|ENST00000305978|SCAND1'] 65366 10190 LSEPSSLQY True H1975_Epitope_Rep1 1022.49204082542 1022.4909499358599 44.136 2 0.12989265922244686 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 123328 16379 VHTTTILYL True PC9_epitope_Rep6 1059.59644632431 1059.5953499358602 75.39 2 0.1298851498016214 0.0013727077540389287 0.9438714419765777 ['ENST00000476917.5_1_10:126100559-126100658:-|nuORF'] 83314 14389 QALLDLHAL True NCI_RA007_Epitope_Rep1 992.5654805492001 992.56438993586 60.012 2 0.12988438371770641 0.0013727077540389287 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 76745 20014 NTTDIFQTV True PC9_epitope_Rep2 1037.50293986229 1037.50184993586 82.388 2 0.12988428447411116 0.0013727077540389287 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 67805 22672 LTIDDGIFEV True PC9_epitope_Rep2 1120.56520576568 1120.5641099358602 92.703 2 0.12988166639772944 0.0013727077540389287 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 117172 14742 TYTDRVFFL True NCI_RA007_Epitope_Rep3 1160.5866099165999 1160.58550993586 65.399 2 0.129880702704268 0.0013727077540389287 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 21564 17948 ERSDTFINL True PC9_epitope_Rep5 1093.54038800017 1093.53928993586 74.053 2 0.12987892205994514 0.0013727077540389287 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 109868 11125 THMPSVVGV True PC9_epitope_Rep6 925.4691376362099 925.46804993586 53.731 2 0.1298723081044189 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 86178 19774 QPSSLLPLA True PC9_epitope_Rep4 924.5280324113199 924.52748496793 84.186 1 0.12986360670102834 0.0013727077540389287 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 17896 5183 EIDKNDHLY True H1975_Epitope_Rep3 1145.53530261973 1145.53366490379 25.032 3 0.1298552392117355 0.0013727077540389287 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 132863 13146 VYTSGIYNI True NCI_RA007_Epitope_Rep5 1028.51786165044 1028.51727496793 57.243 1 0.12985409208074827 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1'] 15206 11927 EAFNMIDQNR True PC9_epitope_Rep4 1236.5557207944798 1236.55462993586 53.662 2 0.1298520520350504 0.0013727077540389287 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 116835 11992 TYMKDLYQL True NCI_RA007_Epitope_Rep3 1173.5739966275698 1173.57288993586 54.296 2 0.12985181854964742 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 61296 7200 LLDVRDRDSY True H1975_Epitope_Rep1 1250.62551460646 1250.62387490379 32.707 3 0.12985176082682004 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 108346 4791 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 23.518 2 0.1298404556163317 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 31821 9051 GEMWNNTAA True H1975_Epitope_Rep2 992.4021802752 992.40163496793 39.767 1 0.12983979794614142 0.0013727077540389287 0.9438714419765777 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000446155.1_1_1:45997278-45997635:+|nuORF', 'ENST00000507778.1_1_4:41844266-41844645:-|nuORF', 'nc|ENSG00000124097|B2RPK0|HMGB1P1'] 73271 5290 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 25.407 2 0.12982976125560367 0.0013727077540389287 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 87482 5086 QTETKTITY True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 24.645 2 0.12982418737807638 0.0013727077540389287 0.9438714419765777 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF', 'EPB41L3|p.H979Q|1|0.29|ENSG00000082397|chr18:5396237-5396237|G/T|missense_variant'] 3951 15538 AHDVDPIEL True PC9_epitope_Rep3 1007.4923751785899 1007.49126993586 64.916 2 0.12981971013564536 0.0013727077540389287 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 2411 16174 AEQLMTLISA True H1975_Epitope_Rep2 1075.55834656343 1075.55724993586 67.423 2 0.1298166519158618 0.0013727077540389287 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 39997 18232 HQSGFFSAL True PC9_epitope_Rep2 992.4715801643599 992.47048993586 75.447 2 0.12980357584627422 0.0013727077540389287 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000120029|ENST00000370033|ARMH3'] 6674 8817 AQAPDLQRV True PC9_epitope_Rep3 996.5352430500799 996.53414993586 38.864 2 0.12980234087175083 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 96186 11974 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.45890993586 51.139 2 0.12979866898382109 0.0013727077540389287 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 5762 12821 APEEHPVLL True PC9_epitope_Rep5 1003.5338460677498 1003.53274993586 54.325 2 0.12979713666765508 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 70578 17774 LYYDAIWHF True NCI_RA007_Epitope_Rep5 1226.5760452328998 1226.57494993586 75.154 2 0.12979358374574093 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 1356 7022 AEEEAAVVAA True H1975_Epitope_Rep2 958.4607406971397 958.4596499358599 31.935 2 0.12979060392207048 0.0013727077540389287 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 113271 12108 TQFGGKRPFGV True PC9_epitope_Rep5 1192.63529144452 1192.6336349037902 51.564 3 0.1297879478496326 0.0013727077540389287 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 112665 4684 TPFQGQGHGA True PC9_epitope_Rep3 998.4569927293797 998.45588993586 23.111 2 0.12978642344289967 0.0013727077540389287 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 43256 20230 IHDGFGFML True PC9_epitope_Rep4 1035.48478770035 1035.4836899358602 85.955 2 0.12978561638504896 0.0013727077540389287 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 27455 15247 FNPFVTSDR True PC9_epitope_Rep3 1081.51925863277 1081.5181699358602 63.794 2 0.12978415526177667 0.0013727077540389287 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 73737 8638 NHANGLTL True PC9_epitope_Rep1 838.4297153523801 838.42860993586 38.064 2 0.12978131705090892 0.0013727077540389287 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 105472 6223 SVASPFTSK True NCI_RA007_Epitope_Rep5 922.4759968384601 922.47488993586 30.614 2 0.12977683336919457 0.0013727077540389287 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4', 'ENSG00000187527|ENST00000342358|ATP13A5'] 47656 11025 IYPPKLHQF True PC9_epitope_Rep4 1141.62841515893 1141.62676490379 50.185 3 0.12977196494491583 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 118722 6725 VEDARGFTP True H1975_Epitope_Rep3 990.4770594676199 990.47596993586 30.825 2 0.12976948272023775 0.0013727077540389287 0.9438714419765777 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 35156 6435 GSDCTTIHY True H1975_Epitope_Rep2 995.4018459220301 995.40074993586 29.672 2 0.12976059059365722 0.0013727077540389287 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.Y236C|3|0.43|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 39865 12774 HQIEAVDGEEL True PC9_epitope_Rep1 1238.5778957076998 1238.57678993586 54.009 2 0.1297602890667733 0.0013727077540389287 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 73163 9035 NEDLRSWTA True H1975_Epitope_Rep3 1090.50433684462 1090.5032299358602 39.745 2 0.1297571878283862 0.0013727077540389287 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 35395 12769 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56537496793 54.176 1 0.12975669393412567 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 24169 14346 EYTEKMVSI True PC9_epitope_Rep5 1098.52671208198 1098.52560993586 60.182 2 0.12975390112380714 0.0013727077540389287 0.9438714419765777 ['ENSG00000126749|ENST00000599672|EMG1'] 91835 12382 RPNDIMAEV True PC9_epitope_Rep4 1043.50697969691 1043.50588993586 55.432 2 0.12974638691386708 0.0013727077540389287 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 88228 13856 QYDPYTDSRF True PC9_epitope_Rep2 1290.55168095986 1290.5505899358602 58.581 2 0.1297446483681443 0.0013727077540389287 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2', 'nc|ENSG00000166833|Q8IVL1-6|NAV2', 'nc|ENSG00000166833|Q8IVL1-5|NAV2'] 21094 7834 ERDPHEEIL True PC9_epitope_Rep1 1136.5462016566 1136.5445549037902 34.96 3 0.129738897841645 0.0013727077540389287 0.9438714419765777 ['ENSG00000153140|ENST00000283122|CETN3'] 70519 18271 LYTEKFEEF True PC9_epitope_Rep5 1204.5652057656796 1204.5641099358602 75.292 2 0.12973783718542994 0.0013727077540389287 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 40765 20326 HVDEFLTFV True PC9_epitope_Rep4 1105.54441075145 1105.5433099358602 86.326 2 0.12973363556194006 0.0013727077540389287 0.9438714419765777 ['ENSG00000142623|ENST00000375471|PADI1'] 1630 9062 AEFVEVTK True PC9_epitope_Rep3 921.4807478657299 921.47964993586 39.799 2 0.12972937726826564 0.0013727077540389287 0.9438714419765777 ['CON__P02769'] 97837 14169 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 59.511 2 0.1297293140844373 0.0013727077540389287 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 3942 12578 AHDTTLVAL True PC9_epitope_Rep4 939.50254593947 939.50144993586 56.209 2 0.12971960667681567 0.0013727077540389287 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 639 8777 AATGGGIVRV True PC9_epitope_Rep1 899.51886470995 899.51776993586 38.601 2 0.12971693137505722 0.0013727077540389287 0.9438714419765777 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000561993.5_1_16:8732964-8736423:+|nuORF'] 48814 5194 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 25.051 2 0.1297149086424983 0.0013727077540389287 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 23707 18063 EYIKFLRSI True PC9_epitope_Rep2 1167.6651945904698 1167.6640899358601 74.781 2 0.12968894382657262 0.0013727077540389287 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 139433 14114 YTELEAIM[Oxidation]YA True H1975_Epitope_Rep2 1218.5478418298198 1218.5467499358601 59.444 2 0.12968541990866567 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 94921 7577 RYPDSHQLF True NCI_RA007_Epitope_Rep3 1161.55670677065 1161.5550749037902 36.934 3 0.12968105297378185 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 64472 10596 LQTSIREEI True PC9_epitope_Rep6 1087.5873381925899 1087.58624993586 51.574 2 0.12967739389341176 0.0013727077540389287 0.9438714419765777 ['PMF1|p.Q83H|1|0.2|ENSG00000160783|chr1:156232407-156232407|G/T|missense_variant', 'nc|ENSG00000160783|Q6P1K2-4|PMF1', 'nc|ENSG00000160783|Q6P1K2-3|PMF1', 'nc|ENSG00000160783|Q6P1K2-6|PMF1', 'ENSG00000160783|ENST00000368277|PMF1', 'nc|ENSG00000160783|Q6P1K2-5|PMF1'] 132623 13091 VYPSSLSKI True PC9_epitope_Rep5 992.5542471591599 992.55314993586 55.358 2 0.12966428459381218 0.0013727077540389287 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 45088 6414 IQRTPKIQVYS True H1975_Epitope_Rep2 1331.75613485319 1331.7550299358602 29.596 2 0.1296612837978799 0.0013727077540389287 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 37219 22257 GVVDIFQTV True PC9_epitope_Rep5 976.52294703088 976.52184993586 90.619 2 0.12965910669255507 0.0013727077540389287 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 66581 5172 LSSPATLNSR True NCI_RA007_Epitope_Rep3 1044.5563724174801 1044.55526993586 27.335 2 0.1296584387567372 0.0013727077540389287 0.9438714419765777 ['CON__P00761'] 103648 14877 SRDMTMFVT True PC9_epitope_Rep2 1086.48380172418 1086.4827099358602 62.487 2 0.12965518354994454 0.0013727077540389287 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 109780 16202 THISPNAIF True PC9_epitope_Rep3 998.5185303567799 998.51742993586 67.46 2 0.12965236349102657 0.0013727077540389287 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant'] 8318 7222 ATLNSIVAK True NCI_RA007_Epitope_Rep2 915.5389314481899 915.53782993586 32.711 2 0.12964471760146187 0.0013727077540389287 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 21348 6250 ERLKEAYSV True PC9_epitope_Rep2 1093.57677350889 1093.57566993586 29.438 2 0.12964443003253487 0.0013727077540389287 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 89210 5394 REILKTYAA True H1975_Epitope_Rep3 1063.6025943339098 1063.6014899358602 25.813 2 0.12964109498206178 0.0013727077540389287 0.9438714419765777 ['ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'ENSG00000167333|ENST00000300747|TRIM68', 'nc|ENSG00000167333|Q6AZZ1-2|TRIM68'] 87068 11090 QSEIASM[Oxidation]LY True H1975_Epitope_Rep2 1056.47976227 1056.4786699358601 47.692 2 0.1296372328847165 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 89821 10194 RFIGATANF True NCI_RA007_Epitope_Rep4 995.51886470995 995.51776993586 46.067 2 0.12963722394549732 0.0013727077540389287 0.9438714419765777 ['ENSG00000172922|ENST00000308418|RNASEH2C'] 18772 12014 ELDPTNMTY True H1975_Epitope_Rep3 1082.45902644498 1082.4579299358602 51.372 2 0.12963712483688714 0.0013727077540389287 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 132511 15237 VYPERTPLL True PC9_epitope_Rep1 1086.60734536118 1086.6062499358602 63.429 2 0.12962651531146266 0.0013727077540389287 0.9438714419765777 ['ENST00000475235.1_1_6:32782088-32784728:-|nuORF', 'ENSG00000241106|ENST00000438763|HLA-DOB'] 22793 9578 EVDPDTILK True H1975_Epitope_Rep2 1028.5389910178399 1028.5378899358602 41.816 2 0.12962535957310448 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100227|Q9BY77-2|POLDIP3', 'ENSG00000100227|ENST00000252115|POLDIP3'] 132606 20789 VYPQYVIEY True PC9_epitope_Rep1 1172.57537652656 1172.5748749679299 84.794 1 0.12962370725980413 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 77104 16224 NYAQVFNKL True PC9_epitope_Rep4 1095.57129420563 1095.57018993586 70.348 2 0.12962085983482416 0.0013727077540389287 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2', 'nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 8246 23398 ATIIQLFQV True PC9_epitope_Rep5 1031.6015317047497 1031.6004299358601 94.981 2 0.12960603235979257 0.0013727077540389287 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 21757 10032 ESDDGVVVY True H1975_Epitope_Rep1 981.4291062156899 981.42855496793 43.527 1 0.12960511223974044 0.0013727077540389287 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 74414 14060 NIVEKLREV True PC9_epitope_Rep5 1098.6397081186199 1098.6386099358601 59.096 2 0.1296005971484519 0.0013727077540389287 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 31099 17409 GAYTQVIFL True H1975_Epitope_Rep2 1010.54368247546 1010.54258993586 72.256 2 0.1295980604585832 0.0013727077540389287 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 73964 13210 NHMPSSINL True PC9_epitope_Rep1 1011.48076494907 1011.47966993586 55.676 2 0.12959795573984012 0.0013727077540389287 0.9438714419765777 ['ZBTB33|p.H573Sfs*2|1|0.19|ENSG00000177485|chrX:120255129-120255130|-/T|frameshift_variant', 'ENSG00000177485|ENST00000557385|ZBTB33'] 110322 22617 TIITTLENL True PC9_epitope_Rep1 1016.57537652656 1016.57426993586 91.805 2 0.12959495147465325 0.0013727077540389287 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 28429 14870 FSEELANLY True H1975_Epitope_Rep2 1084.5076908895599 1084.5065899358601 62.349 2 0.12959148084859218 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 130476 14970 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 69.593 2 0.129584517482771 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 96652 10475 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.4652749679301 45.311 1 0.12958067435889703 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 94763 18724 RYLPDTLLL True PC9_epitope_Rep6 1102.63864548946 1102.63754993586 84.664 2 0.12956672911564268 0.0013727077540389287 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 83807 12070 QEEPGQLLP True H1975_Epitope_Rep2 1009.5080252427299 1009.50692993586 51.509 2 0.12956451021334192 0.0013727077540389287 0.9438714419765777 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF', 'ENST00000566424.1_1_16:29468907-29469081:+|nuORF', 'ENST00000395400.4_1_16:29468907-29472819:+|nuORF', 'nc|ENSG00000181625|Q9BQ83-2|SLX1A', 'ENST00000561824.5_1_16:30205929-30212162:+|nuORF', 'ENSG00000181625|ENST00000330181|SLX1B', 'ENSG00000132207|ENST00000251303|SLX1A'] 2518 7904 AEQRVPLSV True H1975_Epitope_Rep3 997.5556441414899 997.55454993586 35.376 2 0.12956433647514862 0.0013727077540389287 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 53507 22235 KVLPGILFL True PC9_epitope_Rep1 998.6528390016199 998.65174993586 90.349 2 0.12956035893970264 0.0013727077540389287 0.9438714419765777 ['ENSG00000104998|ENST00000263379|IL27RA'] 97907 7623 SHMEGVASV True PC9_epitope_Rep3 915.4120166829099 915.41090993586 34.319 2 0.12954850110489266 0.0013727077540389287 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 97938 10517 SHQGDYAVL True PC9_epitope_Rep5 988.4614094034798 988.46030993586 45.441 2 0.12954450186309488 0.0013727077540389287 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT'] 23732 12925 EYIPKWEQF True NCI_RA007_Epitope_Rep3 1238.5971746003 1238.5960699358602 58.106 2 0.12953703751421058 0.0013727077540389287 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 24711 15067 FAVPENSSV True PC9_epitope_Rep1 948.4552613938799 948.45416993586 62.775 2 0.12951989805016503 0.0013727077540389287 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 118629 4240 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 21.421 2 0.12951980688642095 0.0013727077540389287 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 116497 6578 TYDNVHQQF True NCI_RA007_Epitope_Rep5 1150.5043368446202 1150.5032299358602 31.964 2 0.1295080392547495 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 8182 8555 ATGENLPRV True PC9_epitope_Rep2 955.5086939490699 955.50758993586 38.268 2 0.12950630271221253 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 54344 9142 KYQEVTNNL True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 40.104 2 0.12950109855344596 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 135036 21409 YAIEVDPVL True PC9_epitope_Rep5 1017.5382627418498 1017.53767496793 87.414 1 0.12950104778195431 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF'] 27809 8822 FQESSVKEL True PC9_epitope_Rep6 1065.5342399905699 1065.5331499358601 43.85 2 0.12949964851138765 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 15210 18780 EAFQLFDR True PC9_epitope_Rep1 1024.4977949121999 1024.49668993586 77.021 2 0.12949813700613652 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549017.5_1_12:56552185-56553840:+|nuORF'] 11931 15145 DHSIIETL True PC9_epitope_Rep6 926.47091145802 926.46980993586 70.321 2 0.1294962846846592 0.0013727077540389287 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 75041 11056 NMDNM[Oxidation]FESY True H1975_Epitope_Rep3 1165.40561135357 1165.40450993586 47.617 2 0.12948931851286963 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 39387 16264 HLVPEVPTV True PC9_epitope_Rep2 989.55458151233 989.55348993586 67.8 2 0.12948913445289112 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 13885 7497 DRDPASGTAL True PC9_epitope_Rep3 1001.47778774361 1001.47668993586 33.84 2 0.12948610200021746 0.0013727077540389287 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 77506 17176 NYQGHFHLF True PC9_epitope_Rep1 1161.5355774032498 1161.53392490379 70.888 3 0.12948402698985065 0.0013727077540389287 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 39073 5327 HKVPGDVSL True NCI_RA007_Epitope_Rep5 950.5185303567799 950.51742993586 27.183 2 0.12946848018383322 0.0013727077540389287 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 1542 6671 AEETPPTSV True H1975_Epitope_Rep3 929.43419159613 929.43364496793 30.614 1 0.1294659338286894 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 117118 21866 TYSIGFLRF True PC9_epitope_Rep5 1102.5811306133398 1102.58002993586 89.144 2 0.1294602236989363 0.0013727077540389287 0.9438714419765777 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF', 'ENST00000468535.5_1_7:1589488-1590526:-|nuORF', 'ENST00000474813.5_1_7:1589488-1595099:-|nuORF', 'ENSG00000164855|ENST00000297477|TMEM184A'] 87667 21425 QVAVAGLLTV True PC9_epitope_Rep2 969.58588164061 969.5853349679301 87.884 1 0.12944957502835228 0.0013727077540389287 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 1926 7099 AEINHSFTP True H1975_Epitope_Rep2 1014.47705946762 1014.47596993586 32.236 2 0.12944794306272328 0.0013727077540389287 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 31574 10117 GEFSITYKP True H1975_Epitope_Rep3 1040.5178616504397 1040.51727496793 43.957 1 0.1294479041866092 0.0013727077540389287 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 40160 5420 HRDYETATL True PC9_epitope_Rep6 1104.51998690876 1104.5188899358602 28.757 2 0.12944497306478295 0.0013727077540389287 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 28033 16399 FRAPQVMTY True PC9_epitope_Rep1 1111.54845058607 1111.5473499358602 67.902 2 0.12943756647861426 0.0013727077540389287 0.9438714419765777 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263'] 76779 15458 NVDFDAPLGY True H1975_Epitope_Rep1 1109.5029398622898 1109.50184993586 64.73 2 0.12943725285524874 0.0013727077540389287 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 6752 21536 AQEDYLFSV True PC9_epitope_Rep5 1070.49204082542 1070.49094993586 87.874 2 0.12943142558505438 0.0013727077540389287 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 86304 12445 QQGPVGVNV True PC9_epitope_Rep1 896.4715801643599 896.47048993586 52.735 2 0.12942126316288544 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 103684 9115 SRDQSTPII True PC9_epitope_Rep1 1015.5298233164699 1015.52872993586 39.912 2 0.12942063455549044 0.0013727077540389287 0.9438714419765777 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 71446 21306 MISLEIPQV True PC9_epitope_Rep4 1028.55761828744 1028.55652993586 90.121 2 0.12941784769068013 0.0013727077540389287 0.9438714419765777 ['ENSG00000111231|ENST00000228827|GPN3', 'nc|ENSG00000111231|Q9UHW5-2|GPN3', 'nc|ENSG00000111231|Q9UHW5-3|GPN3'] 53189 6679 KSYLMNRL True NCI_RA007_Epitope_Rep3 1023.5535359665099 1023.55242993586 33.354 2 0.12941712669371794 0.0013727077540389287 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4'] 24013 17659 EYPELRGVF True PC9_epitope_Rep6 1108.5553097883198 1108.5542099358602 80.564 2 0.1294103663908066 0.0013727077540389287 0.9438714419765777 ['ENST00000409011.5_2_2:39005336-39005417:+|nuORF'] 2707 5253 AETKPPMAP True H1975_Epitope_Rep3 940.4688032830398 940.46770993586 25.29 2 0.12940225176094078 0.0013727077540389287 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 44140 17622 ILPKELQTW True PC9_epitope_Rep4 1126.6386454894598 1126.63754993586 75.804 2 0.12940088351366935 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 69948 22708 LYEEAFTVF True PC9_epitope_Rep5 1117.53317736141 1117.53208993586 92.351 2 0.12939657970082438 0.0013727077540389287 0.9438714419765777 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 96821 8932 SESFVSPEA True H1975_Epitope_Rep3 951.41854153199 951.4179949679301 39.354 1 0.12939289111757313 0.0013727077540389287 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 52028 7065 KLFVGGLK True NCI_RA007_Epitope_Rep4 860.5483739330798 860.54726993586 33.8 2 0.1293838322169272 0.0013727077540389287 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 48959 9076 KEYLQGLEA True H1975_Epitope_Rep2 1049.5393253710097 1049.53822993586 39.863 2 0.12938219202685383 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000475705.1_1_6:32086681-32087735:-|nuORF'] 72092 16645 MRDPIRILV True PC9_epitope_Rep2 1111.65358436095 1111.65248993586 69.269 2 0.12937322588857939 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 47384 13981 IYIGGQEHF True PC9_epitope_Rep2 1062.5134449763398 1062.5123499358601 59.05 2 0.12937229828617486 0.0013727077540389287 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 69897 5899 LYDATYETK True H1975_Epitope_Rep3 1102.5182555732601 1102.51714993586 27.701 2 0.1293722735666914 0.0013727077540389287 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 40168 12991 HRFGGLVL True PC9_epitope_Rep4 897.5184707871299 897.51736993586 57.862 2 0.1293705122123994 0.0013727077540389287 0.9438714419765777 ['ENSG00000007520|ENST00000007390|TSR3'] 73795 9664 NHDTALTL True PC9_epitope_Rep2 883.43994568291 883.43884993586 42.511 2 0.1293664445144766 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 31971 7882 GESSLILKA True NCI_RA007_Epitope_Rep3 916.52294703088 916.52184993586 38.12 2 0.12935933482079506 0.0013727077540389287 0.9438714419765777 ['ENSG00000139567|ENST00000388922|ACVRL1'] 86813 14345 QRPAVIGDVL True PC9_epitope_Rep6 1066.61349337078 1066.6123899358602 67.076 2 0.12935873726149902 0.0013727077540389287 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000463545.1_1_3:154070629-154071064:-|nuORF'] 34791 6042 GQTGVIRSV True PC9_epitope_Rep2 915.5137793295099 915.51268993586 28.632 2 0.12934914961164523 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 76869 7543 NVIGEPIDER True H1975_Epitope_Rep3 1140.5775017848798 1140.57640993586 33.997 2 0.12934568954281583 0.0013727077540389287 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000548647.1_1_12:57037677-57039699:-|nuORF'] 12004 9311 DIAFAYQR True H1975_Epitope_Rep1 982.4872302285 982.48612993586 40.721 2 0.12934564517694475 0.0013727077540389287 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 107916 21891 TAVPSLFSV True PC9_epitope_Rep5 919.50148331031 919.5009349679301 89.241 1 0.1293442617817984 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1'] 34793 6225 GQTGVIRSV True PC9_epitope_Rep2 915.5137793295099 915.51268993586 29.342 2 0.1293347734816245 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 112847 17054 TPMSVLQQA True PC9_epitope_Rep3 973.49026700361 973.48916993586 70.751 2 0.1293315534070088 0.0013727077540389287 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant'] 21203 14831 ERFEKTFQL True PC9_epitope_Rep1 1196.6189726740397 1196.61733490379 61.866 3 0.12931285936602252 0.0013727077540389287 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 3467 12319 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep1 1042.5658747883201 1042.56476993586 52.412 2 0.12930269645759182 0.0013727077540389287 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 5362 11572 ALTGHLEEV True PC9_epitope_Rep5 967.49746055903 967.49636993586 49.506 2 0.12930182831598958 0.0013727077540389287 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 135643 7935 YEETSGVSV True H1975_Epitope_Rep3 969.4291062156899 969.42855496793 35.491 1 0.1292997032782477 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 6866 13103 AQIGSYVHV True PC9_epitope_Rep2 972.50288029264 972.50178993586 55.677 2 0.1292963149809543 0.0013727077540389287 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 21673 16122 ERVPINDVL True PC9_epitope_Rep5 1053.58185888933 1053.5807699358602 67.003 2 0.1292931731819413 0.0013727077540389287 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 34726 7257 GQNPTEAEL True NCI_RA007_Epitope_Rep3 957.44033960573 957.43924993586 35.656 2 0.12928535399709545 0.0013727077540389287 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 701 10945 AAVGFPTHL True H1975_Epitope_Rep3 911.48650195251 911.48540993586 47.186 2 0.1292820428049152 0.0013727077540389287 0.9438714419765777 ['ENSG00000177352|ENST00000321895|CCDC71'] 67807 22811 LTIDDGIFEV True PC9_epitope_Rep3 1120.56520576568 1120.5641099358602 93.013 2 0.12927868764823142 0.0013727077540389287 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 111757 9825 TLQKEGVIGV True PC9_epitope_Rep6 1042.6022599807397 1042.60116993586 48.255 2 0.1292737206737468 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 21805 16451 ESDLPDELLY True H1975_Epitope_Rep3 1192.54994962436 1192.54937496793 68.765 1 0.1292734203003925 0.0013727077540389287 0.9438714419765777 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 5498 20284 AMSSKFFLV True PC9_epitope_Rep1 1028.5364889200398 1028.5353899358602 82.849 2 0.12926774705475566 0.0013727077540389287 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 93670 5797 RTIAPIIGR True NCI_RA007_Epitope_Rep3 995.6239984848298 995.62290993586 29.78 2 0.12926572445683754 0.0013727077540389287 0.9438714419765777 ['ENSG00000096401|ENST00000371477|CDC5L'] 70768 12817 MEDSPDLLAA True H1975_Epitope_Rep2 1060.47467650912 1060.47417496793 54.409 1 0.1292621213603659 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000462436.1_1_7:97484616-97487685:-|nuORF'] 45133 10336 IQVTKVTQV True PC9_epitope_Rep5 1014.6073453611799 1014.60624993586 44.741 2 0.12925760850736326 0.0013727077540389287 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 62477 10291 LLSNDEVTIK True PC9_epitope_Rep6 1130.6183039677 1130.61720993586 50.272 2 0.12925689090668402 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 126360 12124 VPLAIVNKA True PC9_epitope_Rep3 923.58040233735 923.57930993586 51.677 2 0.12925623544799478 0.0013727077540389287 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 139371 5188 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.46057496793 25.028 1 0.1292559343273292 0.0013727077540389287 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 139949 19175 YVIEDDVNM True PC9_epitope_Rep3 1096.47467650912 1096.47356993586 78.975 2 0.1292539408137391 0.0013727077540389287 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 114461 9424 TSERGSFSLY True H1975_Epitope_Rep3 1145.53530261973 1145.5342099358602 41.25 2 0.1292515963119675 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'TCF12|p.S223Tfs*22|1|0.16|ENSG00000140262|chr15:57231240-57231240|G/-|frameshift_variant'] 2137 11235 AELWGEQAEA True H1975_Epitope_Rep1 1102.49310345458 1102.49200993586 48.189 2 0.1292480290314592 0.0013727077540389287 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 107148 22564 SYMWTINNF True PC9_epitope_Rep5 1174.51173072418 1174.5106299358602 91.796 2 0.1292460742463111 0.0013727077540389287 0.9438714419765777 ['SPOP-SLC35B1|1|fusion', 'ENST00000513080.5_1_17:47699309-47700178:-|nuORF', 'ENSG00000121067|ENST00000504102|SPOP', 'ENSG00000144228|ENST00000280098|SPOPL'] 113115 12179 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.47578496793 51.705 1 0.12923035955126985 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 22963 17844 EVIEKFDYV True PC9_epitope_Rep3 1140.5702911461199 1140.56918993586 73.833 2 0.1292292186841426 0.0013727077540389287 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 98065 19398 SHVDLVVMV True PC9_epitope_Rep1 997.52665251233 997.52554993586 79.426 2 0.12921486414480604 0.0013727077540389287 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 109955 9127 THSLETQEL True PC9_epitope_Rep1 1056.5087535187201 1056.5076499358602 39.959 2 0.1292144699363679 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 2412 16132 AEQLMTLISA True H1975_Epitope_Rep2 1075.55834656343 1075.5577749679298 67.264 1 0.12920674396314843 0.0013727077540389287 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 84276 12711 QEYFGSLAA True H1975_Epitope_Rep2 984.4552613938797 984.45471496793 53.993 1 0.12920558383417216 0.0013727077540389287 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 6595 19578 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 80.133 2 0.12920277322901944 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 97078 5993 SEYM[Oxidation]NNKEALP True H1975_Epitope_Rep2 1310.58126721642 1310.58016993586 28.031 2 0.12919905050335245 0.0013727077540389287 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK', 'ENST00000515592.1_1_5:140041093-140041799:+|nuORF'] 86932 4838 QRSGNVAEL True PC9_epitope_Rep4 972.4988575413598 972.49776993586 25.194 2 0.12919475028389035 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 14639 10223 DVNAAIAAIK True H1975_Epitope_Rep3 984.5603951687599 984.55928993586 44.37 2 0.1291943695935209 0.0013727077540389287 0.9438714419765777 ['ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A'] 88081 21821 QVVGLGLVAV True PC9_epitope_Rep5 953.5909670210499 953.5904149679301 88.968 1 0.12919353656566368 0.0013727077540389287 0.9438714419765777 ['ENST00000495270.1_1_9:130699601-130700099:-|nuORF', 'ENSG00000136908|ENST00000314392|DPM2'] 61579 19677 LLGPPPVGV True PC9_epitope_Rep2 847.51673945163 847.51619496793 81.074 1 0.12919095908567133 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 4303 14575 AILDYLITK True NCI_RA007_Epitope_Rep4 1048.61684741572 1048.61574993586 63.44 2 0.12918550125182648 0.0013727077540389287 0.9438714419765777 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'nc|ENSG00000100697|Q9UPY3-3|DICER1'] 25427 14840 FELDKVFSP True H1975_Epitope_Rep2 1080.54916177872 1080.5480699358602 62.24 2 0.1291685933886077 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000140859|Q9BVG8-4|KIFC3', 'nc|ENSG00000140859|Q9BVG8-5|KIFC3', 'ENSG00000140859|ENST00000445690|KIFC3', 'nc|ENSG00000140859|Q9BVG8|KIFC3', 'nc|ENSG00000140859|Q9BVG8-6|KIFC3'] 63610 9183 LPLQDVYK True H1975_Epitope_Rep3 974.5436824754598 974.54258993586 40.313 2 0.12916843636561087 0.0013727077540389287 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000514975.1_1_4:106406529-106406643:+|nuORF', 'ENST00000359165.5_1_12:19609713-19609968:-|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 125672 16739 VMSATFAKF True PC9_epitope_Rep5 1000.5051887917599 1000.50408993586 69.393 2 0.12916727751120713 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 74766 14613 NLLSVAYK True PC9_epitope_Rep1 906.5174677276199 906.51636993586 61.032 2 0.12916250255670805 0.0013727077540389287 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 21381 5145 ERMAGNEAL True PC9_epitope_Rep6 989.4600295044899 989.4589299358599 27.513 2 0.12915364045577254 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 43385 12300 IHQAMVTSL True PC9_epitope_Rep1 998.52190148506 998.52080993586 52.167 2 0.1291487735885274 0.0013727077540389287 0.9438714419765777 ['KIF2A|p.L455Ifs*30|1|0.58|ENSG00000068796|chr5:62363794-62363800|TCTCATT/-|frameshift_variant', 'nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'ENST00000504883.1_1_5:61602296-61648542:+|nuORF', 'KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion'] 132513 16734 VYPESFREL True PC9_epitope_Rep1 1138.56587447202 1138.56476993586 69.194 2 0.12914468526895176 0.0013727077540389287 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 16312 5759 EEISNLKAA True NCI_RA007_Epitope_Rep4 973.5080252427299 973.50692993586 28.772 2 0.12914407715547438 0.0013727077540389287 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000584875.1_1_18:18548690-18549151:-|nuORF'] 31488 12471 GEEMPGLSV True H1975_Epitope_Rep2 917.4164333570099 917.4158849679301 53.058 1 0.1291404196171328 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 48806 3506 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 18.334 2 0.129139828023224 0.0013727077540389287 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 140552 15549 YYLNEIQSF True NCI_RA007_Epitope_Rep4 1175.5498900547097 1175.5487899358602 67.535 2 0.1291396065435927 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 9976 13388 AYSRVQYQF True PC9_epitope_Rep1 1160.5614577979202 1160.56036993586 56.357 2 0.1291362017833527 0.0013727077540389287 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 127149 12846 VQDRFEVNV True PC9_epitope_Rep4 1104.55637241748 1104.55526993586 57.277 2 0.1291356907124998 0.0013727077540389287 0.9438714419765777 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14519750-14520297:-|nuORF'] 89031 9686 REEEQAFLV True H1975_Epitope_Rep1 1119.5560380643099 1119.5549499358601 42.182 2 0.12911457690052225 0.0013727077540389287 0.9438714419765777 ['ENSG00000196843|ENST00000357485|ARID5A'] 72789 22097 NAFSENFLEV True PC9_epitope_Rep5 1168.5400536470001 1168.53894993586 90.028 2 0.12911341860655798 0.0013727077540389287 0.9438714419765777 ['ENSG00000170836|ENST00000305921|PPM1D', 'ENST00000392995.7_1_17:58734367-58740910:+|nuORF'] 4284 5351 AIITPPPAK True NCI_RA007_Epitope_Rep3 906.5538532363399 906.55274993586 28.055 2 0.12911133912011494 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 119839 6154 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51731496793 28.644 1 0.12910560793960985 0.0013727077540389287 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 139456 15408 YTFDWTMLK True NCI_RA007_Epitope_Rep3 1203.5634319438698 1203.5623299358601 68.162 2 0.129100879909144 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 93454 8752 RSDTPLIY True H1975_Epitope_Rep3 963.5025459394699 963.50144993586 38.669 2 0.129099519552616 0.0013727077540389287 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 87870 19578 QVLEKFFET True PC9_epitope_Rep5 1139.5862755634298 1139.5851699358602 80.358 2 0.12909593914712927 0.0013727077540389287 0.9438714419765777 ['ENSG00000180182|ENST00000324817|MED14'] 41601 23707 IDFPGGILSF True PC9_epitope_Rep2 1064.55424715916 1064.5531499358601 96.659 2 0.12908917125452535 0.0013727077540389287 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 544 9801 [Acetylation]-AAQGEPQVQFK True H1975_Epitope_Rep3 1243.6197012663295 1243.6186099358601 42.726 2 0.12908449162463506 0.0013727077540389287 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 4027 13560 AHLDATTVL True PC9_epitope_Rep5 939.5025459394701 939.50144993586 57.181 2 0.12908172261587506 0.0013727077540389287 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 96588 9529 SELSRTYLP True H1975_Epitope_Rep2 1064.55022440788 1064.54912993586 41.624 2 0.12907438465643628 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000135049|Q9UPW5-2|AGTPBP1', 'ENSG00000135049|ENST00000357081|AGTPBP1', 'nc|ENSG00000135049|Q9UPW5-3|AGTPBP1'] 6087 10668 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 46.347 2 0.12907238210435104 0.0013727077540389287 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 58129 9922 LESDKTFIP True H1975_Epitope_Rep2 1048.54407639828 1048.5429699358601 43.154 2 0.12906740526840216 0.0013727077540389287 0.9438714419765777 ['ENSG00000162851|ENST00000366514|TFB2M'] 26204 8392 FHTTPNTSL True PC9_epitope_Rep2 1016.49270953176 1016.49160993586 37.652 2 0.1290622210798658 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 126493 13627 VPMTPLRTV True PC9_epitope_Rep5 1012.5739370579199 1012.57282993586 57.439 2 0.1290569625824985 0.0013727077540389287 0.9438714419765777 ['ENSG00000107949|ENST00000278100|BCCIP'] 4431 17985 AIVKEIVNI True PC9_epitope_Rep3 997.6171817688898 997.61608993586 74.383 2 0.1290496292910374 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 114158 13452 TRSSLEVEL True PC9_epitope_Rep2 1032.5451390274397 1032.5440499358601 57.022 2 0.12904908182934377 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'nc|ENSG00000257923|P39880-4|CUX1', 'ENSG00000257923|ENST00000292535|CUX1', 'nc|ENSG00000257923|P39880-2|CUX1', 'nc|ENSG00000257923|P39880-5|CUX1', 'nc|ENSG00000257923|P39880-3|CUX1', 'nc|ENSG00000257923|P39880-6|CUX1'] 1360 7136 AEEEAAVVAA True H1975_Epitope_Rep3 958.4607406971397 958.4596499358599 32.42 2 0.12904861163425965 0.0013727077540389287 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 11939 15141 DHSPDLYSL True PC9_epitope_Rep6 1045.47163973401 1045.4705499358602 70.306 2 0.12904728969385634 0.0013727077540389287 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ENST00000417716.1_1_1:197191903-197192119:+|nuORF'] 110454 15566 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.53308993586 65.024 2 0.12904594120698296 0.0013727077540389287 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 113237 6943 TQDTQPHYI True PC9_epitope_Rep4 1101.50908787189 1101.50798993586 33.943 2 0.1290458742150136 0.0013727077540389287 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 103051 17885 SQLDSPKALYL True PC9_epitope_Rep5 1233.66050313285 1233.6594099358601 73.812 2 0.12904485855667536 0.0013727077540389287 0.9438714419765777 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 86529 10706 QRALPSEEL True PC9_epitope_Rep5 1041.54547338061 1041.54436993586 46.17 2 0.12904211589577416 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF', 'EIF4G1|p.G1434C|1|0.25|ENSG00000114867|chr3:184331511-184331511|G/T|missense_variant'] 47810 19694 IYSAERFLI True PC9_epitope_Rep2 1110.60734536118 1110.6062499358602 81.139 2 0.12903209183905132 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 26120 11584 FHGDAQVAL True PC9_epitope_Rep1 956.4715801643599 956.47048993586 49.435 2 0.12902518613165484 0.0013727077540389287 0.9438714419765777 ['ENSG00000143412|ENST00000368947|ANXA9'] 5441 4519 ALYEAGER True NCI_RA007_Epitope_Rep5 907.4399456829099 907.43884993586 24.036 2 0.12902427907128292 0.0013727077540389287 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 99608 20414 SLFPGKLEVV True PC9_epitope_Rep1 1087.62774645259 1087.62664993586 83.335 2 0.12902329443874003 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000580966.1_1_17:18149569-18150009:-|nuORF'] 74767 14716 NLLSVAYK True PC9_epitope_Rep3 906.5174677276199 906.51636993586 61.745 2 0.12902150513597277 0.0013727077540389287 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENST00000440317.1_1_2:127315208-127315727:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 94096 3609 RVYGGLTTK True NCI_RA007_Epitope_Rep5 993.5607295219299 993.55962993586 19.839 2 0.12901432095617565 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 18040 13801 EIIQRIENV True PC9_epitope_Rep4 1112.61897267404 1112.6178699358602 60.982 2 0.1290134859108289 0.0013727077540389287 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 115448 22130 TVFLYFESV True PC9_epitope_Rep4 1103.55391280599 1103.55280993586 93.34 2 0.12901214835707034 0.0013727077540389287 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 13904 11954 DRDPTAYAL True PC9_epitope_Rep4 1020.4876241513199 1020.48652993586 53.771 2 0.1290092364125286 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15', 'nc|ENSG00000174912|P0C7V9|METTL15P1'] 2594 8236 AESIDNPLHEA True H1975_Epitope_Rep3 1194.55168095986 1194.5505899358602 36.663 2 0.12900823271415762 0.0013727077540389287 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 26709 7897 FLDESRSTQY True H1975_Epitope_Rep2 1244.567331024 1244.5667749679299 35.322 1 0.12900595679428897 0.0013727077540389287 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 133012 10564 VYVQHPITF True NCI_RA007_Epitope_Rep5 1102.5811306133398 1102.58002993586 47.27 2 0.1290044928099 0.0013727077540389287 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 119623 8123 VESAYEVIK True NCI_RA007_Epitope_Rep1 1036.5440763982797 1036.5429699358601 35.595 2 0.1290016065635167 0.0013727077540389287 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 88984 2956 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 15.69 2 0.12899703413072894 0.0013727077540389287 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 9224 8131 AVQEFGLAR True NCI_RA007_Epitope_Rep4 989.5294293936498 989.52832993586 38.067 2 0.12899498075095203 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 69652 10688 LVVSTQTALA True H1975_Epitope_Rep3 1001.5757108797299 1001.57517496793 46.187 1 0.12899493967753442 0.0013727077540389287 0.9438714419765777 ['CON__P02769'] 100178 19852 SLLGDDALVQV True PC9_epitope_Rep6 1128.60265390356 1128.60154993586 89.02 2 0.12898664130557586 0.0013727077540389287 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 104423 6723 SSIQGQWPK True NCI_RA007_Epitope_Rep4 1029.5243440132099 1029.5232499358601 32.483 2 0.12898608130755548 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000054267|Q4LE39-4|ARID4B', 'ENST00000491632.5_1_1:235341091-235490234:-|nuORF', 'nc|ENSG00000054267|Q4LE39-3|ARID4B', 'nc|ENSG00000054267|Q4LE39-2|ARID4B', 'ENSG00000054267|ENST00000264183|ARID4B'] 41985 6672 IEDGKVVTV True H1975_Epitope_Rep3 958.53351171458 958.53240993586 30.618 2 0.12898194135761 0.0013727077540389287 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF'] 18366 18671 EIYKEFFEV True PC9_epitope_Rep6 1202.58594121026 1202.5848499358601 84.462 2 0.12897342678651008 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 17189 15887 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 65.92 2 0.1289698130423096 0.0013727077540389287 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 76638 7326 NTIDPSHPM True PC9_epitope_Rep6 1010.4491304676201 1010.44802993586 37.352 2 0.1289685374870234 0.0013727077540389287 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 17626 9445 EHNIFHNEV True PC9_epitope_Rep5 1137.5203212619301 1137.51868490379 41.285 3 0.12896779114856646 0.0013727077540389287 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 138829 8653 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.48097496793 38.243 1 0.1289659281980938 0.0013727077540389287 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 9745 13775 AYLEAHETF True PC9_epitope_Rep1 1079.4923751785898 1079.4912699358601 57.832 2 0.12896517669292532 0.0013727077540389287 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 3247 6140 AGFAGDDAPR True PC9_epitope_Rep3 975.4410083120698 975.43990993586 28.664 2 0.1289556329456022 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 18695 9205 ELDDTLKY True H1975_Epitope_Rep2 995.4811417885501 995.48004993586 40.36 2 0.12895108990246923 0.0013727077540389287 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000472253.1_1_5:133533465-133534901:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 128321 10452 VSDFGGRSL True PC9_epitope_Rep5 936.46649478392 936.46538993586 45.19 2 0.1289493119277524 0.0013727077540389287 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 116902 14860 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47054993586 61.979 2 0.12894839717388512 0.0013727077540389287 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 126503 13781 VPNKFLVTA True PC9_epitope_Rep3 987.5753169569099 987.57420993586 58.088 2 0.12894636681729169 0.0013727077540389287 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 135512 13835 YEDSGIPLP True H1975_Epitope_Rep3 989.4705771048499 989.47002496793 58.524 1 0.12894435668052245 0.0013727077540389287 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 110159 6424 TIDDLEEK True PC9_epitope_Rep2 961.46040634397 961.45930993586 30.119 2 0.1289377029336995 0.0013727077540389287 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 22405 16207 ETEYSFLDY True H1975_Epitope_Rep1 1165.4815357113698 1165.48042993586 67.687 2 0.12893714611595505 0.0013727077540389287 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 37749 11890 HAVGDIPGV True PC9_epitope_Rep5 863.45011644379 863.44900993586 50.733 2 0.1289346715852583 0.0013727077540389287 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 96192 11534 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.4594649679301 49.491 1 0.1289308030272328 0.0013727077540389287 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 1373 5950 AEEEPSTSATV True H1975_Epitope_Rep2 1119.49316302423 1119.4920699358602 27.87 2 0.12892200012218563 0.0013727077540389287 0.9438714419765777 ['ENSG00000100023|ENST00000398831|PPIL2', 'ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 26700 14675 FLDDSTALY True H1975_Epitope_Rep3 1043.48114178855 1043.48004993586 61.817 2 0.1289217976341708 0.0013727077540389287 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2'] 103253 12712 SQSTVKVLI True PC9_epitope_Rep1 973.5807962601699 973.57968993586 53.769 2 0.12892061478341765 0.0013727077540389287 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 89126 12403 REFPTVPLV True NCI_RA007_Epitope_Rep3 1056.59678067748 1056.59568993586 55.992 2 0.1289196647418127 0.0013727077540389287 0.9438714419765777 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 46425 22523 ITLEDLEQL True PC9_epitope_Rep2 1072.5652057656798 1072.5641099358602 92.126 2 0.12891954010513412 0.0013727077540389287 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 65323 13336 LSELEAALQR True PC9_epitope_Rep6 1128.6138872935999 1128.61278993586 62.956 2 0.12891695645986703 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 70763 13538 MEDIKILIA True H1975_Epitope_Rep2 1044.58891841572 1044.58782993586 57.211 2 0.12890479130715723 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 53647 18355 KWNPTAGVAF True PC9_epitope_Rep5 1089.56072952193 1089.5596299358601 75.619 2 0.1288994055691216 0.0013727077540389287 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 103679 13787 SRDPVQLNL True PC9_epitope_Rep4 1040.56145779792 1040.56036993586 60.927 2 0.12889906787042732 0.0013727077540389287 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 34767 22359 GQSELTLLL True PC9_epitope_Rep1 972.54916177872 972.54806993586 90.821 2 0.1288989179567056 0.0013727077540389287 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 11560 13333 DGQFSVLFTK True H1975_Epitope_Rep1 1140.5815245361598 1140.5804299358601 56.39 2 0.12889864344043217 0.0013727077540389287 0.9438714419765777 ['CON__P12763'] 123394 14260 VIDGHIYAV True PC9_epitope_Rep1 985.52328138405 985.52218993586 59.675 2 0.12889723285155855 0.0013727077540389287 0.9438714419765777 ['TYK2-KEAP1|1|fusion', 'KEAP1|p.V418L|1|0.32|ENSG00000079999|chr19:10491650-10491650|C/A|missense_variant', 'KEAP1|p.N469Kfs*11|1|0.54|ENSG00000079999|chr19:10489772-10489773|-/T|frameshift_variant', 'KEAP1|p.R596Efs*2|1|0.17|ENSG00000079999|chr19:10486741-10486741|G/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1'] 23110 8906 EVLSKVQQV True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 39.615 2 0.1288962549684184 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 72515 17858 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep4 989.5467196310099 989.54617496793 77.319 1 0.1288944252444008 0.0013727077540389287 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 104964 20774 STIAILNSV True PC9_epitope_Rep3 916.5229470308801 916.52239496793 85.178 1 0.12889057614358354 0.0013727077540389287 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 37984 9384 HEGPVWQV True H1975_Epitope_Rep1 950.46101548066 950.45990993586 41.006 2 0.12888973611870025 0.0013727077540389287 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 96123 7186 SEDVAKIVA True H1975_Epitope_Rep2 930.5022115862998 930.50110993586 32.575 2 0.12888622835004518 0.0013727077540389287 0.9438714419765777 ['ENST00000598115.1_1_19:51906295-51906697:-|nuORF', 'ENST00000477693.1_1_2:122488402-122494426:-|nuORF', 'ENSG00000155438|ENST00000285814|NIFK'] 97672 10499 SHDFYSHEL True PC9_epitope_Rep5 1133.4777877436102 1133.47615490379 45.371 3 0.1288815528110015 0.0013727077540389287 0.9438714419765777 ['ENSG00000095015|ENST00000399503|MAP3K1', 'MAP3K1|p.T946Kfs*22|1|0.62|ENSG00000095015|chr5:56882037-56882037|C/-|frameshift_variant', 'MAP3K1|p.T947Nfs*56|1|0.61|ENSG00000095015|chr5:56882039-56882040|AC/-|frameshift_variant'] 103243 16664 SQSSLIHLV True PC9_epitope_Rep5 982.5447451046201 982.54364993586 69.103 2 0.1288810913187639 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ACOT7|p.R364Gfs*5|1|0.24|ENSG00000097021|chr1:6264651-6264651|C/-|frameshift_variant', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 86049 20086 QPLPVILHV True PC9_epitope_Rep1 1014.6226015025001 1014.62150993586 82.09 2 0.1288658844163465 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ATF7IP|p.S777C|1|0.33|ENSG00000171681|chr12:14460666-14460666|C/G|missense_variant'] 17581 14959 EHLNYVTEI True PC9_epitope_Rep2 1116.54513902744 1116.5440499358601 62.799 2 0.1288657592324282 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 113079 6675 TPYKQEINA True PC9_epitope_Rep1 1062.53457434374 1062.53346993586 30.482 2 0.12886575752374682 0.0013727077540389287 0.9438714419765777 ['ENSG00000138356|ENST00000374700|AOX1'] 26712 7875 FLDESRSTQY True H1975_Epitope_Rep3 1244.567331024 1244.5667749679299 35.267 1 0.12885560252030634 0.0013727077540389287 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 38161 5173 HERPEFIA True NCI_RA007_Epitope_Rep3 997.4981292653698 997.49702993586 27.339 2 0.1288468167190505 0.0013727077540389287 0.9438714419765777 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 26192 10108 FHSGGYGQDAL True PC9_epitope_Rep2 1150.50433684462 1150.5032299358602 44.218 2 0.12884662940984798 0.0013727077540389287 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 1820 11800 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 50.382 1 0.12884569497723874 0.0013727077540389287 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 17544 13417 EHIPESPYL True PC9_epitope_Rep6 1083.52367530687 1083.52256993586 63.287 2 0.12884510896843732 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 103909 12719 SRMDGEGQLTL True PC9_epitope_Rep4 1205.5710365054497 1205.56992993586 56.777 2 0.12884319507452766 0.0013727077540389287 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 38587 13406 HHGYSYIL True PC9_epitope_Rep3 988.4766655448 988.47556993586 56.598 2 0.12884224592760854 0.0013727077540389287 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 2456 9719 AEQNIIPSA True H1975_Epitope_Rep2 941.4818104948899 941.48070993586 42.37 2 0.1288422163241133 0.0013727077540389287 0.9438714419765777 ['ENSG00000183508|ENST00000369448|TENT5C'] 114967 18158 TTILQLHEI True PC9_epitope_Rep2 1066.6022599807402 1066.60116993586 75.149 2 0.12882749346771338 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 73790 14968 NHDSRLWSL True PC9_epitope_Rep5 1126.55195574338 1126.5503249037902 62.576 3 0.12882559154101725 0.0013727077540389287 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 136676 11940 YIEGGTASGFY True H1975_Epitope_Rep2 1163.51350454599 1163.5124099358602 51.006 2 0.128824866474087 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 8975 10473 AVHDSFVAV True PC9_epitope_Rep6 943.4763311916299 943.4752299358599 51.043 2 0.1288238994531557 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 119529 4806 VEQVVKETP True H1975_Epitope_Rep3 1027.5549754351498 1027.5538699358601 23.615 2 0.12881307385441132 0.0013727077540389287 0.9438714419765777 ['ENSG00000155827|ENST00000389120|RNF20'] 7049 17047 AQVALVNEV True PC9_epitope_Rep1 941.51819600361 941.51708993586 70.397 2 0.12881140413217432 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 70905 5949 [Acetylation]-M[Oxidation]EKTELIQK True NCI_RA007_Epitope_Rep2 1176.6060257285797 1176.6049299358601 27.75 2 0.12880843129396152 0.0013727077540389287 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ'] 127455 10674 VQSNRILGV True PC9_epitope_Rep2 984.5716285587998 984.57052993586 46.369 2 0.1288050269670813 0.0013727077540389287 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 94636 7134 RYLDKTEQW True NCI_RA007_Epitope_Rep5 1237.6091362663299 1237.60802993586 34.117 2 0.12880231200510311 0.0013727077540389287 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__P01030'] 62190 17414 LLPNHSYVF True PC9_epitope_Rep5 1088.5654805492 1088.5643899358602 71.984 2 0.12880196459285498 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 39066 6217 HKVPGDVSL True NCI_RA007_Epitope_Rep2 950.5185303567799 950.51742993586 28.79 2 0.12879667899630576 0.0013727077540389287 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 135799 4838 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 23.699 2 0.12878918756023527 0.0013727077540389287 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 86148 8854 QPRYPVNSV True PC9_epitope_Rep5 1058.55089311422 1058.5497899358602 39.002 2 0.1287879809839194 0.0013727077540389287 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 13180 11530 DLTDYLM[Oxidation]K True H1975_Epitope_Rep1 1013.47394861357 1013.47284993586 49.336 2 0.12878327064555523 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 104776 7338 STDPEALHY True H1975_Epitope_Rep3 1031.45598966987 1031.4548899358601 33.202 2 0.1287801214458301 0.0013727077540389287 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF', 'ENST00000508415.1_1_4:7790587-7795535:-|nuORF'] 95078 11169 RYSSMAASF True PC9_epitope_Rep2 1018.4542158480599 1018.45310993586 48.286 2 0.12877732849611034 0.0013727077540389287 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 7549 17911 ASFNDTFVHV True PC9_epitope_Rep2 1135.5298233164701 1135.5287299358602 74.199 2 0.12877682688067546 0.0013727077540389287 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 103542 17549 SRDDNMFQI True PC9_epitope_Rep5 1124.49205790876 1124.4909699358602 72.51 2 0.12877654776818004 0.0013727077540389287 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 96154 4953 SEEEGVPST True H1975_Epitope_Rep2 933.39272070697 933.39217496793 24.134 1 0.1287737653946824 0.0013727077540389287 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 90406 20835 RIMPEDIIINC True PC9_epitope_Rep1 1315.6628287153098 1315.6617299358602 84.969 2 0.12877373527314745 0.0013727077540389287 0.9438714419765777 ['ENSG00000198900|ENST00000361337|TOP1'] 139861 20781 YVDPVITSI True PC9_epitope_Rep1 1005.53826274185 1005.53716993586 84.764 2 0.12876586572360474 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 132750 21581 VYSLQQFGF True PC9_epitope_Rep4 1087.53384606775 1087.53274993586 91.194 2 0.12876002228510508 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 86175 20467 QPSSLLPLA True PC9_epitope_Rep2 924.5280324113199 924.52748496793 84.155 1 0.12874755014782768 0.0013727077540389287 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 131297 21054 VVQPLLVSV True PC9_epitope_Rep5 952.5957180483199 952.59462993586 86.044 2 0.1287412290607299 0.0013727077540389287 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 3492 9993 AGLQFPVGR True NCI_RA007_Epitope_Rep4 943.5239500903898 943.52284993586 45.283 2 0.1287385699316752 0.0013727077540389287 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 26082 17823 FHEGDVITL True PC9_epitope_Rep1 1029.51311062317 1029.51200993586 73.35 2 0.12873818445101368 0.0013727077540389287 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 138339 10232 YRAQPSVSL True PC9_epitope_Rep2 1019.5399940773499 1019.53888993586 44.693 2 0.12873327339317378 0.0013727077540389287 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 72350 8386 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep1 1128.4645061286797 1128.46397496793 37.185 1 0.12872956868140642 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 123468 7514 VIFTGGVGK True NCI_RA007_Epitope_Rep4 876.5069030439198 876.50580993586 35.548 2 0.12872880920768656 0.0013727077540389287 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 60045 13191 LHSDLEYTV True PC9_epitope_Rep2 1075.51858992643 1075.51748993586 56.017 2 0.12871965572643476 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 31495 9170 GEEM[Oxidation]PGLSV True H1975_Epitope_Rep3 933.4113483570098 933.41024993586 40.262 2 0.12871839808258612 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 113392 16757 TQLGPPYHIL True PC9_epitope_Rep6 1137.61824439805 1137.6171499358602 76.948 2 0.12871487201771156 0.0013727077540389287 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 93911 16073 RVIGTLLGT True PC9_epitope_Rep1 928.57056592964 928.56946993586 66.64 2 0.12871337594878907 0.0013727077540389287 0.9438714419765777 ['ENSG00000175390|ENST00000651655|EIF3F', 'ENST00000528653.1_1_11:8009127-8013479:+|nuORF'] 87626 20738 QTVAWFPLYY True H1975_Epitope_Rep2 1286.6335601090198 1286.6324699358602 85.873 2 0.1287128183155161 0.0013727077540389287 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 70015 15563 LYGKIAEAF True PC9_epitope_Rep4 1010.5436824754598 1010.54258993586 67.784 2 0.12870766453463664 0.0013727077540389287 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 62157 14854 LLPGKTYSF True PC9_epitope_Rep2 1024.5593325395998 1024.55822993586 62.4 2 0.12870690160194923 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 131976 19965 VYGFLRNGF True PC9_epitope_Rep5 1071.5501648382299 1071.5490699358602 81.848 2 0.1287057798876482 0.0013727077540389287 0.9438714419765777 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 65369 10408 LSEPSSLQY True H1975_Epitope_Rep2 1022.49204082542 1022.49147496793 45.048 1 0.1287037679713778 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 74099 15333 NHVPVITTL True PC9_epitope_Rep1 992.5654805492001 992.56438993586 63.798 2 0.12870237272697 0.0013727077540389287 0.9438714419765777 ['ENST00000609454.5_1_22:38228707-38236239:-|nuORF', 'ENST00000498417.5_1_22:38228707-38229954:-|nuORF', 'ENSG00000100124|ENST00000215941|ANKRD54'] 83097 22821 PYNDYFEYF True PC9_epitope_Rep5 1256.50260550912 1256.50207496793 92.775 1 0.1286934321324169 0.0013727077540389287 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 73999 8804 NHQGTYVL True PC9_epitope_Rep5 930.4559301002199 930.45482993586 38.808 2 0.1286921347074274 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 2885 10565 AEYSNTWTP True H1975_Epitope_Rep1 1067.45598966987 1067.4548899358601 45.59 2 0.12868465116397307 0.0013727077540389287 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 74117 12789 NHVTPPNVSL True PC9_epitope_Rep3 1076.56145779792 1076.56036993586 54.214 2 0.128678896868587 0.0013727077540389287 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 98833 10989 SITSVFITK True NCI_RA007_Epitope_Rep4 994.5698972233 994.56880993586 49.137 2 0.12867159900009217 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 73185 8331 NEEIVPQIK True H1975_Epitope_Rep3 1068.5815245361598 1068.5804299358601 37.03 2 0.12866704658992703 0.0013727077540389287 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000397343.2_1_3:9390585-9390873:+|nuORF', 'ENSG00000226784|ENST00000458128|PGAM4'] 27089 21889 FLPSYIIDV True PC9_epitope_Rep4 1065.57464825057 1065.57354993586 92.407 2 0.128661615380912 0.0013727077540389287 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 44888 20965 IQDEEFYTL True PC9_epitope_Rep5 1156.5288202569598 1156.5277299358602 85.702 2 0.12865845301172057 0.0013727077540389287 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 136435 12096 YHGDSDLQL True PC9_epitope_Rep1 1046.4668887067398 1046.4657899358601 51.387 2 0.12864251672597668 0.0013727077540389287 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF'] 125959 9718 VPAGGAVAV True PC9_epitope_Rep2 739.42283906679 739.42229496793 42.721 1 0.12863538456503126 0.0013727077540389287 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 26725 16027 FLDGNELTL True NCI_RA007_Epitope_Rep4 1020.51277627 1020.51227496793 69.517 1 0.12861626263009518 0.0013727077540389287 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 115579 21455 TVIATNILL True PC9_epitope_Rep2 956.59063266788 956.58952993586 87.999 2 0.12861422975661413 0.0013727077540389287 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 94114 13018 RWFDKSFTF True NCI_RA007_Epitope_Rep3 1232.59784330664 1232.5961849037901 58.478 3 0.12861368112394364 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 103444 11080 SRAEDYEVL True PC9_epitope_Rep4 1080.50875351872 1080.5076499358602 50.396 2 0.1286132771008513 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 126703 7284 VPRPPDTVST True PC9_epitope_Rep4 1067.56112344475 1067.56002993586 35.333 2 0.12860842582154455 0.0013727077540389287 0.9438714419765777 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 28788 17521 FTDEEVDELYR True PC9_epitope_Rep1 1414.6252398229399 1414.62414993586 72.189 2 0.12860142287647286 0.0013727077540389287 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 74022 10814 NHSDLDAEL True PC9_epitope_Rep1 1012.44615326216 1012.44504993586 46.483 2 0.1286006492378505 0.0013727077540389287 0.9438714419765777 ['ENSG00000184292|ENST00000371225|TACSTD2'] 96550 11938 SELPGAFEA True NCI_RA007_Epitope_Rep4 919.4287122928699 919.42816496793 52.92 1 0.12860014520805582 0.0013727077540389287 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 60440 19684 LILDPIFKV True PC9_epitope_Rep6 1056.65831830488 1056.6572299358602 88.373 2 0.1285955995508141 0.0013727077540389287 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 37237 17774 GVVEKLSVL True PC9_epitope_Rep5 942.5749826037398 942.57388993586 73.386 2 0.12859532617146247 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000503693.1_1_4:1283701-1322488:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-5|MAEA'] 112917 22851 TPQSIFIFA True PC9_epitope_Rep1 1022.5436824754598 1022.5425899358601 92.69 2 0.12859268564044696 0.0013727077540389287 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 96817 8774 SESFVSPEA True H1975_Epitope_Rep1 951.41854153199 951.4179949679301 38.68 1 0.12858806455074842 0.0013727077540389287 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 70303 18941 LYPEGLAQL True PC9_epitope_Rep6 1002.5385970950199 1002.53750993586 85.502 2 0.12858460783410475 0.0013727077540389287 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 84685 12246 QHFDSVM[Oxidation]QL True PC9_epitope_Rep5 1119.5018946969099 1119.5007899358602 52.092 2 0.12858043916418097 0.0013727077540389287 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 59318 4204 LGIHEDSTNR True PC9_epitope_Rep1 1140.5523496662001 1140.5506949037901 21.065 3 0.12857803773083004 0.0013727077540389287 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 26049 11459 FHDM[Oxidation]GGVQL True PC9_epitope_Rep1 1018.4542162284997 1018.45310993586 48.956 2 0.12856441228639143 0.0013727077540389287 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 9666 20918 AYGNVFSAF True PC9_epitope_Rep4 974.4497820906199 974.44923496793 88.62 1 0.1285606350059198 0.0013727077540389287 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 6324 4612 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 24.25 2 0.12855905527745404 0.0013727077540389287 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 90581 7158 RKHWIANNL True NCI_RA007_Epitope_Rep4 1150.63596015086 1150.63432490379 34.156 3 0.12855666920610592 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000101294|Q8TCT9|HM13', 'nc|ENSG00000101294|Q8TCT9-4|HM13', 'ENSG00000101294|ENST00000398174|HM13', 'ENST00000464173.5_1_20:30136866-30137929:+|nuORF', 'ENST00000483310.5_1_20:30136863-30150236:+|nuORF', 'ENST00000472128.5_1_20:30136905-30155443:+|nuORF', 'ENST00000492709.5_1_20:30132820-30157019:+|nuORF', 'ENST00000460389.5_1_20:30136650-30157019:+|nuORF'] 129830 20826 VTLGPVPEI True PC9_epitope_Rep2 923.53278343859 923.53168993586 85.551 2 0.12855569320554547 0.0013727077540389287 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 127597 12927 VQYNEPLKV True PC9_epitope_Rep5 1088.5866099165999 1088.58550993586 54.735 2 0.12855473358443736 0.0013727077540389287 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 47366 10480 IYIAGHPAF True NCI_RA007_Epitope_Rep5 987.51780208079 987.51670993586 46.943 2 0.1285384822929714 0.0013727077540389287 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 14337 19820 DTDSAYILFY True H1975_Epitope_Rep2 1206.5444703211 1206.54336993586 82.217 2 0.12853821644984353 0.0013727077540389287 0.9438714419765777 ['ENSG00000170832|ENST00000300896|USP32', 'nc|ENSG00000129204|P35125-2|USP6', 'ENST00000575709.5_1_17:5042349-5076270:+|nuORF', 'ENSG00000129204|ENST00000574788|USP6'] 98499 20848 SILETVTAV True PC9_epitope_Rep1 931.52261267771 931.52150993586 85.017 2 0.12853646653707979 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 103933 9137 SRPENAIIY True PC9_epitope_Rep6 1061.5505587610498 1061.54946993586 45.251 2 0.128534340671127 0.0013727077540389287 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 64211 18894 LQIGDKIMQV True PC9_epitope_Rep5 1143.6321802100301 1143.63108993586 77.695 2 0.12851959934927318 0.0013727077540389287 0.9438714419765777 ['ENSG00000213977|ENST00000225525|TAX1BP3'] 25331 7967 FEFDTKTSA True NCI_RA007_Epitope_Rep3 1044.47639076128 1044.47528993586 38.441 2 0.12851722691790277 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 123096 16500 VHAPPMQLGF True PC9_epitope_Rep6 1095.5535359665098 1095.5524299358601 75.898 2 0.12851501849697958 0.0013727077540389287 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 105910 16426 SVLDLSHNQL True PC9_epitope_Rep4 1124.58258716532 1124.5814899358602 71.144 2 0.12851217104438176 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 83714 5753 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 27.155 2 0.12850899586170023 0.0013727077540389287 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 97824 12677 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 56.606 2 0.12850882633579658 0.0013727077540389287 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 98854 23529 SIVDFLITA True PC9_epitope_Rep2 977.5433481222899 977.54224993586 95.979 2 0.1285053446953775 0.0013727077540389287 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 139333 12599 YTDSSSILNY True H1975_Epitope_Rep1 1161.51898384925 1161.51847496793 53.512 1 0.12850350610595312 0.0013727077540389287 0.9438714419765777 ['ENSG00000111647|ENST00000279907|BLTP3B'] 5069 19793 ALLPELREV True PC9_epitope_Rep1 1038.6073453611798 1038.6062499358602 80.955 2 0.12849736746466517 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170175|P11230-2|CHRNB1', 'ENSG00000170175|ENST00000306071|CHRNB1'] 77034 16893 NVVMVNQGL True PC9_epitope_Rep3 972.5062514209199 972.50514993586 70.134 2 0.12849524787395009 0.0013727077540389287 0.9438714419765777 ['ENSG00000134057|ENST00000256442|CCNB1'] 102689 4800 SQDPGTHVV True PC9_epitope_Rep5 938.4457593393399 938.44466993586 23.507 2 0.12849118996872247 0.0013727077540389287 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 95100 9012 RYTLQASTF True NCI_RA007_Epitope_Rep3 1085.5505587610498 1085.54946993586 42.544 2 0.12848722732518364 0.0013727077540389287 0.9438714419765777 ['ENSG00000055130|ENST00000325222|CUL1'] 26091 15386 FHEGDVITL True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 71.33 2 0.12848593482358647 0.0013727077540389287 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 142 15961 AADEVLAVL True NCI_RA007_Epitope_Rep5 899.4963979298699 899.49530993586 68.12 2 0.12848377358637922 0.0013727077540389287 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'nc|ENSG00000144028|O75643-2|SNRNP200'] 131972 20044 VYGFLRNGF True PC9_epitope_Rep1 1071.5501648382299 1071.5490699358602 81.925 2 0.12848110914464433 0.0013727077540389287 0.9438714419765777 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 120287 17028 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 70.516 2 0.12847627380052298 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 5205 12098 ALPSKLPTF True NCI_RA007_Epitope_Rep5 972.56441792004 972.56332993586 53.191 2 0.12847555846331413 0.0013727077540389287 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 7463 14463 ASDMLQLEY True H1975_Epitope_Rep3 1068.4797618895598 1068.4786699358601 60.99 2 0.12846722482819592 0.0013727077540389287 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 4108 8552 AHTAEVNCL True PC9_epitope_Rep1 956.43856578392 956.43746993586 37.732 2 0.12845609195092494 0.0013727077540389287 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 59161 10801 LGEYGFQNA True H1975_Epitope_Rep3 997.4505103666099 997.4499649679301 46.625 1 0.1284547423058179 0.0013727077540389287 0.9438714419765777 ['CON__P02769'] 7833 7413 ATAGFTIGR True NCI_RA007_Epitope_Rep4 892.4766655447999 892.47556993586 35.156 2 0.12845243195996903 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'MED12|p.V456A|1|0.18|ENSG00000184634|chrX:71122756-71122756|T/C|missense_variant'] 60 12822 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 54.428 1 0.12844877638964783 0.0013727077540389287 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 989 8642 AEAEALYSA True H1975_Epitope_Rep3 923.42362691243 923.42307496793 38.237 1 0.12844841398878487 0.0013727077540389287 0.9438714419765777 ['ENSG00000183891|ENST00000333610|TTC32'] 123527 16490 VIIDDHPEVTV True PC9_epitope_Rep5 1235.63976768827 1235.6386699358602 68.428 2 0.128433456584194 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 53297 14819 KTLEGEFSV True PC9_epitope_Rep5 1008.5127762699999 1008.51166993586 62.001 2 0.12843277225801045 0.0013727077540389287 0.9438714419765777 ['ENSG00000100811|ENST00000262238|YY1', 'ENSG00000230797|ENST00000429584|YY2'] 409 14047 AALNGLYRV True PC9_epitope_Rep2 975.55016483823 975.54906993586 59.312 2 0.12843094785955664 0.0013727077540389287 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000161671|Q5UCC4-2|EMC10'] 35258 11023 GSLNWVPVTK True NCI_RA007_Epitope_Rep1 1099.6025943339098 1099.6014899358602 46.873 2 0.12842589589791858 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196188|P14091-3|CTSE', 'nc|ENSG00000196188|P14091-2|CTSE', 'ENSG00000196188|ENST00000358184|CTSE'] 109642 12068 THDLEGPPL True PC9_epitope_Rep5 977.4818104948899 977.48070993586 51.415 2 0.12842154331351766 0.0013727077540389287 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 130427 17039 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.49037496793 70.366 1 0.12841694931862982 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 113390 19155 TQLGPPYHIL True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 78.717 2 0.12840677830002825 0.0013727077540389287 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 72547 20456 MVGEGFIEV True PC9_epitope_Rep4 979.4684689298699 979.46792496793 86.828 1 0.12840449873977397 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 113923 20668 TRIGVMSLI True PC9_epitope_Rep1 988.5739370579199 988.57282993586 84.323 2 0.12840124551337254 0.0013727077540389287 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 83755 13271 QEDSLNWVA True H1975_Epitope_Rep2 1060.48253877088 1060.4814499358602 56.176 2 0.12839659241890805 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 26045 11204 FHDLEGNAV True PC9_epitope_Rep3 1000.4614094034799 1000.46030993586 48.102 2 0.1283909053919952 0.0013727077540389287 0.9438714419765777 ['ENSG00000099219|ENST00000339450|ERMP1'] 76357 9481 NSEPETLEY True H1975_Epitope_Rep3 1080.46113461996 1080.46057496793 41.473 1 0.12839056581876362 0.0013727077540389287 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 92230 9642 RQINQFDL True NCI_RA007_Epitope_Rep4 1032.5352430500798 1032.5341499358601 43.941 2 0.12838728658779427 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000572932.1_1_16:16374097-16382502:+|nuORF'] 13195 20368 DLTDYLMK True PC9_epitope_Rep1 997.47903361357 997.47792993586 83.17 2 0.12838678786393795 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 136540 5668 YHSEGETL True PC9_epitope_Rep1 934.40322582102 934.40212993586 26.623 2 0.1283828304666003 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF', 'USP54|p.S1440*|1|0.29|ENSG00000166348|chr10:73500821-73500831|CCTCACGTTTG/-|frameshift_variant'] 48807 3580 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 18.671 2 0.1283782257893289 0.0013727077540389287 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 94835 12568 RYLVISEKL True PC9_epitope_Rep4 1119.66519459047 1119.6640899358601 56.167 2 0.12837387437220077 0.0013727077540389287 0.9438714419765777 ['ENSG00000116212|ENST00000371370|LRRC42'] 1789 7443 AEIAESVQA True H1975_Epitope_Rep3 916.45017601344 916.44906993586 33.607 2 0.12836541950169933 0.0013727077540389287 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 132595 11639 VYPPPHQVF True PC9_epitope_Rep4 1082.5549158654999 1082.55380993586 52.525 2 0.1283568856688366 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 35455 15527 GTELGNELFY True H1975_Epitope_Rep2 1141.5291546101298 1141.52804993586 64.879 2 0.12835653341879144 0.0013727077540389287 0.9438714419765777 ['ENSG00000126821|ENST00000247225|SGPP1'] 132769 10067 VYSPKSPSL True PC9_epitope_Rep5 976.52294703088 976.52184993586 43.704 2 0.12835005441870065 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000102858|O60291-3|MGRN1', 'ENSG00000102858|ENST00000262370|MGRN1', 'nc|ENSG00000102858|O60291-4|MGRN1', 'nc|ENSG00000102858|O60291|MGRN1', 'MGRN1-C16orf96|2|fusion'] 25507 7564 FEQEMATAA True H1975_Epitope_Rep2 996.4222470134398 996.4216949679301 34.049 1 0.12834963050138284 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 97822 12471 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 55.776 2 0.12834192315047238 0.0013727077540389287 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 3940 14076 AHDTTLVAL True PC9_epitope_Rep3 939.50254593947 939.50144993586 59.231 2 0.1283351617607541 0.0013727077540389287 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 95169 17806 SAAFPGASL True PC9_epitope_Rep2 819.41266830591 819.41211496793 73.783 1 0.1283298421184424 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 83777 14002 QEEGYIIAV True H1975_Epitope_Rep2 1020.5127762699998 1020.51227496793 59.007 1 0.12832791213554948 0.0013727077540389287 0.9438714419765777 ['ENSG00000155903|ENST00000286364|RASA2', 'nc|ENSG00000155903|Q15283|RASA2'] 34631 13911 GQIGMIQAL True NCI_RA007_Epitope_Rep3 929.5004377644899 929.49934993586 62.034 2 0.12832500989376663 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A4|p.A859V|1|0.26|ENSG00000132681|chr1:160176588-160176588|C/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF'] 77420 19644 NYMPGQLTI True PC9_epitope_Rep4 1035.5059170677498 1035.50480993586 83.679 2 0.1283246033616534 0.0013727077540389287 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 11772 16805 DHIHIIAL True PC9_epitope_Rep5 930.52870111766 930.52760993586 69.648 2 0.1283238419880383 0.0013727077540389287 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 113973 9724 TRLEETQAL True PC9_epitope_Rep3 1059.5560380643099 1059.5549499358601 42.356 2 0.12832284205224423 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENSG00000204843|ENST00000628224|DCTN1', 'ENST00000466110.5_1_2:74592577-74593714:-|nuORF'] 12287 9286 DISLSDYK True NCI_RA007_Epitope_Rep2 939.45492704071 939.45382993586 40.73 2 0.12832202863081224 0.0013727077540389287 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 4131 13450 AHTPVIISV True PC9_epitope_Rep4 935.54401682863 935.54290993586 59.633 2 0.12831333994021019 0.0013727077540389287 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 59838 10242 LHEAGGQIL True PC9_epitope_Rep1 936.5028802926399 936.50178993586 44.277 2 0.1283121456356093 0.0013727077540389287 0.9438714419765777 ['ENSG00000163482|ENST00000295709|STK36', 'STK36|p.E1226Pfs*43|1|0.22|ENSG00000163482|chr2:218699219-218699244|AGAGGAGCTGTTACAGTGCGAAGTAC/-|frameshift_variant', 'nc|ENSG00000163482|Q9NRP7-2|STK36'] 67825 22843 LTIEDGIFEV True PC9_epitope_Rep5 1134.58085582982 1134.57974993586 92.861 2 0.12831066038574834 0.0013727077540389287 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 75043 17752 NMDTFSNLLY True H1975_Epitope_Rep2 1216.54342477528 1216.5423299358602 73.603 2 0.12829996417110845 0.0013727077540389287 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 123105 10127 VHAQIVSTL True PC9_epitope_Rep6 966.5498304850599 966.54872993586 49.569 2 0.1282931599298966 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 8370 9333 [Acetylation]-ATNFLAHEK True NCI_RA007_Epitope_Rep2 1071.53490901321 1071.53380993586 40.911 2 0.12828968516957084 0.0013727077540389287 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000534232.5_1_8:144663861-144679543:-|nuORF'] 6077 13817 APMPPIIHA True PC9_epitope_Rep4 945.51060852537 945.50950993586 61.044 2 0.1282850685129878 0.0013727077540389287 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 67524 15320 LTELPPLDDY True H1975_Epitope_Rep3 1174.57577044938 1174.57517496793 64.337 1 0.12828306302813589 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 59887 7914 LHHDDPEVL True PC9_epitope_Rep5 1073.51417325233 1073.5130699358601 35.382 2 0.12827291450405598 0.0013727077540389287 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 86150 7029 QPRYPVNSV True PC9_epitope_Rep6 1058.55089311422 1058.5497899358602 36.038 2 0.12825706813423648 0.0013727077540389287 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 17194 14647 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 61.606 2 0.12825635433490543 0.0013727077540389287 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 52146 20163 KLVGEFLEV True PC9_epitope_Rep5 1032.5855472874398 1032.5844499358602 82.605 2 0.12825427883527948 0.0013727077540389287 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 104191 15588 SSDFDPLVY True H1975_Epitope_Rep2 1041.46549172441 1041.46497496793 65.115 1 0.12824861942404095 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000108375|Q68DV7-3|RNF43', 'nc|ENSG00000108375|Q68DV7-2|RNF43', 'ENSG00000108375|ENST00000407977|RNF43', 'nc|ENSG00000108375|Q68DV7-4|RNF43'] 40017 19531 HQTIVVQLL True PC9_epitope_Rep5 1049.62332977849 1049.62222993586 80.178 2 0.1282471388291943 0.0013727077540389287 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 95182 18269 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41211496793 75.284 1 0.12824371501746049 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 97329 10851 SFVLNLGK True H1975_Epitope_Rep1 876.5069030439199 876.50580993586 46.697 2 0.12824359582878714 0.0013727077540389287 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 37780 16569 HAYIISSL True PC9_epitope_Rep1 902.4861675993401 902.48506993586 68.555 2 0.1282413820617654 0.0013727077540389287 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 31378 13131 GEAPVPVLP True H1975_Epitope_Rep2 877.4909186266099 877.48982993586 55.63 2 0.12824064236890487 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 124345 19792 VLDSEGYLLFY True H1975_Epitope_Rep1 1317.6492697428098 1317.64867496793 82.372 1 0.12823947464821642 0.0013727077540389287 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 111251 19910 TLGPVPEI True PC9_epitope_Rep2 824.4643695256 824.46382496793 81.979 1 0.12823343823646544 0.0013727077540389287 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 131832 12820 VYAQVARLF True NCI_RA007_Epitope_Rep5 1065.5971150306498 1065.5960099358601 55.994 2 0.12823206271122076 0.0013727077540389287 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 130757 10700 VVDPNQVNV True PC9_epitope_Rep6 982.5083595959001 982.50726993586 51.97 2 0.1282303689768287 0.0013727077540389287 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 117401 9292 VADGYPVRL True NCI_RA007_Epitope_Rep3 988.5341804209199 988.53308993586 43.656 2 0.1282299633183293 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 9829 19540 AYLKGTVLF True PC9_epitope_Rep3 1010.5800679841799 1010.57896993586 80.393 2 0.12822955591150134 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 2341 10237 AEQDSWYQA True H1975_Epitope_Rep2 1096.4461532621601 1096.4450499358602 44.383 2 0.12822741445577965 0.0013727077540389287 0.9438714419765777 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.H598Tfs*38|1|0.13|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant', 'IRS1|p.Q1064Tfs*17|1|0.18|ENSG00000169047|chr2:226795553-226795554|-/C|frameshift_variant'] 138101 18437 YQGEVVQIL True PC9_epitope_Rep6 1047.5600608155898 1047.5589699358602 83.561 2 0.12821849087904363 0.0013727077540389287 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-3|TRIO'] 102898 9846 SQIDPSSIERA True PC9_epitope_Rep6 1201.5938801250102 1201.59278993586 48.348 2 0.12821622563473997 0.0013727077540389287 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 966 7118 AEAAPPLRP True H1975_Epitope_Rep2 920.50796567308 920.50686993586 32.311 2 0.1282156998378355 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 38144 9230 HEQLTVAEI True H1975_Epitope_Rep2 1038.53457434374 1038.53346993586 40.458 2 0.1282150714002221 0.0013727077540389287 0.9438714419765777 ['ENSG00000167553|ENST00000301072|TUBA1C'] 67804 22929 LTIDDGIFEV True PC9_epitope_Rep1 1120.56520576568 1120.5641099358602 92.997 2 0.12821363212568196 0.0013727077540389287 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 54250 21773 KYPENFFLL True PC9_epitope_Rep5 1169.61209638845 1169.61157496793 88.78 1 0.128213111743321 0.0013727077540389287 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 3914 12459 AHDGGIYAL True PC9_epitope_Rep1 915.44503106335 915.44392993586 52.789 2 0.1282070691016471 0.0013727077540389287 0.9438714419765777 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 28107 19933 FREELMEAL True PC9_epitope_Rep1 1136.5535955361597 1136.5524899358602 81.493 2 0.12819519895973303 0.0013727077540389287 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 132614 20722 VYPQYVIEY True PC9_epitope_Rep5 1172.57537652656 1172.5748749679299 84.765 1 0.12819012303520327 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 76782 15439 NVDFDAPLGY True H1975_Epitope_Rep3 1109.5029398622898 1109.5023749679299 64.8 1 0.12818824525154113 0.0013727077540389287 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 60630 5452 LITEDVQGK True H1975_Epitope_Rep3 1001.5393253710098 1001.53822993586 26.027 2 0.1281744477011614 0.0013727077540389287 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF'] 96193 11626 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.4594649679301 49.853 1 0.1281702813619052 0.0013727077540389287 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 113582 9894 TRADTTTIL True PC9_epitope_Rep3 990.53457434374 990.53346993586 43.013 2 0.12816288163151265 0.0013727077540389287 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 135452 5117 YEAPGVREA True H1975_Epitope_Rep2 990.4770594676198 990.47596993586 24.762 2 0.12815805600503954 0.0013727077540389287 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 23719 16422 EYIKFLRSI True PC9_epitope_Rep6 1167.6651945904698 1167.66355490379 75.571 3 0.1281536836612388 0.0013727077540389287 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 3069 10859 AGAEGFVRV True PC9_epitope_Rep4 904.4766655447999 904.47556993586 49.53 2 0.12815273068035207 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 56875 12214 LEDLPTVEA True H1975_Epitope_Rep2 985.49679185269 985.49624496793 52.064 1 0.12815207472033519 0.0013727077540389287 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 114357 13038 TSDELQFGY True H1975_Epitope_Rep3 1058.4556553167 1058.45507496793 55.39 1 0.12814927867714043 0.0013727077540389287 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 8891 20671 AVGELLQEV True PC9_epitope_Rep1 956.51786165044 956.51676993586 84.334 2 0.12814729906166147 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 86520 13521 QRALLANAL True PC9_epitope_Rep2 968.5767139392399 968.57560993586 57.299 2 0.12814721594546793 0.0013727077540389287 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 47386 13307 IYIGGQEHF True PC9_epitope_Rep4 1062.5134449763398 1062.5123499358601 59.081 2 0.1281341546648197 0.0013727077540389287 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 85340 10346 QLDENTIGY True H1975_Epitope_Rep3 1051.48220441771 1051.48110993586 44.85 2 0.12813210702328112 0.0013727077540389287 0.9438714419765777 ['ENSG00000107679|ENST00000368990|PLEKHA1', 'nc|ENSG00000107679|Q9HB21-2|PLEKHA1', 'ENST00000481451.1_1_10:124172402-124177583:+|nuORF'] 65163 12686 LSDTEVLEY True H1975_Epitope_Rep2 1067.50227115595 1067.5016749679298 53.898 1 0.12812314857900636 0.0013727077540389287 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 103143 19858 SQMPTVIYV True PC9_epitope_Rep4 1036.5263181591597 1036.52577496793 84.514 1 0.12812013875474706 0.0013727077540389287 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 87363 12597 QTDINLPY True H1975_Epitope_Rep2 962.4709114580198 962.4703649679301 53.552 1 0.12811889055001502 0.0013727077540389287 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 118910 3859 VEEPSRPSA True H1975_Epitope_Rep2 970.4719740871799 970.47086993586 19.878 2 0.12811639910424574 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'chr12:2868754-2872102|108|24.14|0.02|10.23|-|0|FOXM1,None|1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 12549 19435 DLDAPDDVDFF True H1975_Epitope_Rep3 1267.52446315251 1267.52336993586 81.448 2 0.1281131239036498 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT', 'ENST00000477529.1_1_7:100485861-100486167:+|nuORF'] 14033 15319 DSDAPLFY True H1975_Epitope_Rep2 926.4021631918599 926.4016149679301 64.082 1 0.12811220690077418 0.0013727077540389287 0.9438714419765777 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 40734 11490 HTVEDLVKV True PC9_epitope_Rep4 1038.5709598524597 1038.5698699358602 51.958 2 0.12811132858610733 0.0013727077540389287 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 108316 8384 TEDGDTALHLA True H1975_Epitope_Rep2 1141.52513185885 1141.5240299358602 37.202 2 0.1281081173338005 0.0013727077540389287 0.9438714419765777 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB'] 25580 6925 FESSGIHVA True H1975_Epitope_Rep2 945.45559574705 945.45448993586 31.558 2 0.1281017163547053 0.0013727077540389287 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 83911 9525 QEISHLIEP True NCI_RA007_Epitope_Rep5 1064.55022440788 1064.54912993586 43.274 2 0.12810038159489315 0.0013727077540389287 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 102838 18931 SQFQQEFPSL True PC9_epitope_Rep6 1209.5666027480097 1209.56550993586 85.463 2 0.12809501159838269 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 47853 18182 IYTFPHSAF True PC9_epitope_Rep4 1081.5232813840498 1081.52218993586 78.004 2 0.12809371093097832 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 99142 22238 SLALISIEL True PC9_epitope_Rep4 957.57464825057 957.57354993586 93.776 2 0.1280900457933264 0.0013727077540389287 0.9438714419765777 ['EFR3A|p.T559S|1|0.41|ENSG00000132294|chr8:131984239-131984239|C/G|missense_variant'] 43488 17164 IHYENGFTI True PC9_epitope_Rep5 1092.52400966004 1092.52290993586 71.042 2 0.12808322941284392 0.0013727077540389287 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 132833 19471 VYTKTISLW True PC9_epitope_Rep5 1109.6120963884498 1109.61098993586 79.949 2 0.12808315169364537 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1'] 91732 14607 RPKLNEGVVEF True PC9_epitope_Rep5 1286.6982856239 1286.69665490379 61.188 3 0.12808158820245952 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5', 'ENST00000554465.5_1_14:70237039-70238175:+|nuORF'] 10832 13611 DAGVIAGL True H1975_Epitope_Rep3 714.39120458534 714.39065496793 57.642 1 0.12807896294601126 0.0013727077540389287 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 84547 13200 QHAVEAISL True PC9_epitope_Rep3 966.5134449763399 966.51234993586 55.811 2 0.12807865707549113 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 138724 15919 YRYDSLLL True PC9_epitope_Rep4 1041.54949613189 1041.54838993586 69.159 2 0.12807670167875182 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-3|NPC1L1'] 21001 5533 ERAPGETAL True PC9_epitope_Rep4 942.4770594676199 942.47596993586 28.047 2 0.12807636655695875 0.0013727077540389287 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 48522 11459 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52766993586 51.007 2 0.12807057609751843 0.0013727077540389287 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 126041 13258 VPAPSPLSA True PC9_epitope_Rep3 837.45961849833 837.4590749679301 56.029 1 0.12806965270238108 0.0013727077540389287 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 76158 8619 NRSDPVTL True PC9_epitope_Rep3 900.46649478392 900.46538993586 38.102 2 0.12806838268144627 0.0013727077540389287 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 42433 6451 IEQETPVSA True H1975_Epitope_Rep2 972.4763907612798 972.47584496793 29.731 1 0.12806762330773608 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2', 'ENST00000395449.7_1_11:47187835-47198404:-|nuORF'] 113993 19341 TRLPEFSEL True PC9_epitope_Rep5 1090.56587447202 1090.56537496793 79.439 1 0.12805674288171165 0.0013727077540389287 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 138307 18790 YRAPELLL True PC9_epitope_Rep2 973.5596668927699 973.55856993586 77.645 2 0.12805237807114705 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'CDK19|p.G207V|2|0.16|ENSG00000155111|chr6:110632056-110632056|C/A|missense_variant', 'ENSG00000155111|ENST00000368911|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'CDK8|p.H300Qfs*3|1|0.14|ENSG00000132964|chr13:26397191-26397192|AT/-|frameshift_variant', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 21634 8777 ERTIHTDVL True PC9_epitope_Rep5 1082.57202248162 1082.57092993586 38.703 2 0.1280495603076346 0.0013727077540389287 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8', 'ENST00000587044.1_1_17:41568567-41594747:+|nuORF', 'ENSG00000005100|ENST00000225296|DHX33', 'nc|ENSG00000005100|Q9H6R0-2|DHX33'] 17288 15540 EHDGSLFQAV True PC9_epitope_Rep2 1101.50908787189 1101.50798993586 65.047 2 0.1280414843100403 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 130474 17213 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 71.23 2 0.1280283306063461 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 77515 14680 NYQGHFHLF True PC9_epitope_Rep4 1161.5355774032498 1161.53392490379 64.402 3 0.12801903585721053 0.0013727077540389287 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 129890 7445 VTLSWKPVQK True NCI_RA007_Epitope_Rep3 1184.6917436914798 1184.69008490379 36.406 3 0.12801420363796173 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 48801 3157 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 16.628 2 0.12801205510465777 0.0013727077540389287 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 29306 16744 FVDPNGKISL True PC9_epitope_Rep3 1088.5866099165999 1088.58550993586 69.545 2 0.1280110572099539 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 104422 6486 SSIQGQWPK True NCI_RA007_Epitope_Rep3 1029.5243440132099 1029.5232499358601 32.544 2 0.12799895911612597 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000054267|Q4LE39-4|ARID4B', 'ENST00000491632.5_1_1:235341091-235490234:-|nuORF', 'nc|ENSG00000054267|Q4LE39-3|ARID4B', 'nc|ENSG00000054267|Q4LE39-2|ARID4B', 'ENSG00000054267|ENST00000264183|ARID4B'] 13185 17710 DLTDYLM[Oxidation]K True PC9_epitope_Rep1 1013.47394861357 1013.47284993586 72.917 2 0.127996827089232 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 138893 8971 YSDVGRYIDHY True H1975_Epitope_Rep3 1386.62042922602 1386.61879490379 39.502 3 0.12799482876240525 0.0013727077540389287 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 11883 18072 DHNYQSYIL True PC9_epitope_Rep5 1151.52473793603 1151.52364993586 74.528 2 0.12798729821680827 0.0013727077540389287 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 103430 21090 SQYPEIIFL True PC9_epitope_Rep6 1108.580461907 1108.57987496793 93.949 1 0.1279851350119058 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 139918 12954 YVFPGVTRL True H1975_Epitope_Rep1 1050.58621599378 1050.5851099358601 54.903 2 0.12797559499451808 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 49328 10175 KIDEHHFVAV True PC9_epitope_Rep3 1193.6193070272102 1193.61766490379 44.09 3 0.12796150500523346 0.0013727077540389287 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 34729 7506 GQNPTEAEL True NCI_RA007_Epitope_Rep5 957.44033960573 957.4397949679301 35.553 1 0.12795831125104146 0.0013727077540389287 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 44201 16198 ILSEVQQAV True PC9_epitope_Rep1 985.54441075145 985.54330993586 67.122 2 0.12795259999304706 0.0013727077540389287 0.9438714419765777 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 93946 19406 RVLPDVLQV True PC9_epitope_Rep2 1037.6233297784897 1037.62222993586 80.023 2 0.1279443432655028 0.0013727077540389287 0.9438714419765777 ['ENSG00000162729|ENST00000314485|IGSF8', 'nc|ENSG00000162729|Q969P0-3|IGSF8'] 102841 11919 SQFSGKITV True PC9_epitope_Rep5 965.51819600361 965.51708993586 50.843 2 0.12793776627030143 0.0013727077540389287 0.9438714419765777 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 28103 13945 FREDSTLAL True PC9_epitope_Rep4 1050.53457434374 1050.53346993586 61.544 2 0.12793621048529455 0.0013727077540389287 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671'] 87919 17883 QVPDDLPNV True PC9_epitope_Rep2 995.4923751785899 995.49126993586 74.088 2 0.12793459342198607 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 35645 14035 GTMEWIMIK True NCI_RA007_Epitope_Rep5 1107.54567370475 1107.5445699358602 60.676 2 0.12792634497120717 0.0013727077540389287 0.9438714419765777 ['ENSG00000168273|ENST00000477703|UQCC5'] 54392 6221 KYQPPPPP True NCI_RA007_Epitope_Rep4 922.4912529797798 922.49014993586 30.537 2 0.12792158883458996 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'GSE1|p.P829Lfs*26|1|0.21|ENSG00000131149|chr16:85663456-85663457|CC/T|frameshift_variant', 'GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 5164 9017 ALPDQGIAKA True PC9_epitope_Rep3 982.5447451046199 982.54364993586 39.628 2 0.1279193828462921 0.0013727077540389287 0.9438714419765777 ['ENSG00000089289|ENST00000356413|IGBP1'] 123458 22270 VIFDLPTTV True PC9_epitope_Rep5 1003.55899818643 1003.55790993586 90.668 2 0.12791924491773748 0.0013727077540389287 0.9438714419765777 ['ENSG00000047578|ENST00000261588|KATNIP'] 23771 13543 EYISTVKTL True PC9_epitope_Rep3 1052.57537652656 1052.57426993586 57.149 2 0.12791755640458238 0.0013727077540389287 0.9438714419765777 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 10887 9768 DAQSAPLRV True PC9_epitope_Rep1 955.50869394907 955.50758993586 42.433 2 0.12791497033615296 0.0013727077540389287 0.9438714419765777 ['CON__P02754'] 65112 10183 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42816496793 44.171 1 0.1279054085840508 0.0013727077540389287 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 4510 9980 AKLRLEVNL True NCI_RA007_Epitope_Rep4 1054.6498788795 1054.6487899358601 45.231 2 0.12790517673949622 0.0013727077540389287 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 17409 7131 EHFPNHQQL True PC9_epitope_Rep3 1148.53630567924 1148.53465490379 32.436 3 0.12790500643616579 0.0013727077540389287 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 116833 12836 TYMKDLYQL True NCI_RA007_Epitope_Rep1 1173.5739966275698 1173.57288993586 53.919 2 0.12790406887833822 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 76160 7182 NRSDPVTL True PC9_epitope_Rep4 900.46649478392 900.46538993586 34.927 2 0.1278997600605939 0.0013727077540389287 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 114799 12693 TTDDPALLY True H1975_Epitope_Rep2 1007.4811417885498 1007.48057496793 53.926 1 0.12789645928426469 0.0013727077540389287 0.9438714419765777 ['ENSG00000182749|ENST00000675840|PAQR7'] 86593 18722 QRDFNMIDL True PC9_epitope_Rep4 1150.54409348162 1150.54298993586 80.096 2 0.1278948152846029 0.0013727077540389287 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 93619 8312 RTDDTPVVL True NCI_RA007_Epitope_Rep5 1014.5345743437399 1014.53346993586 38.649 2 0.1278918894995881 0.0013727077540389287 0.9438714419765777 ['ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1', 'nc|ENSG00000143622|Q92963-2|RIT1'] 5015 18752 ALLDVFREA True PC9_epitope_Rep6 1032.56039516876 1032.55928993586 84.77 2 0.12787981555307812 0.0013727077540389287 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 32746 14980 GHYQNALYL True PC9_epitope_Rep5 1077.5243440132099 1077.5232499358601 62.624 2 0.12787731849205988 0.0013727077540389287 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 7596 20081 ASIDILHSI True PC9_epitope_Rep3 967.5338460677501 967.53274993586 82.493 2 0.127873468009297 0.0013727077540389287 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'PSMD11|p.R20L|1|0.1|ENSG00000108671|chr17:32444582-32444582|G/T|missense_variant'] 7676 2551 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep6 990.4618036426001 990.46070993586 14.741 2 0.12786733232468975 0.0013727077540389287 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 53279 17330 KTIEDTLMTV True PC9_epitope_Rep6 1149.59512599497 1149.5940299358601 79.273 2 0.1278609567219129 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 38508 6013 HHDDPEVL True PC9_epitope_Rep5 960.4301092752 960.42900993586 28.123 2 0.12785907046213943 0.0013727077540389287 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 117096 13650 TYRNVMEQF True PC9_epitope_Rep6 1186.54409348162 1186.54298993586 64.281 2 0.12785835392750106 0.0013727077540389287 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 74433 13491 NIVPVIAKA True PC9_epitope_Rep5 923.5804023373499 923.57930993586 56.912 2 0.12785763988297008 0.0013727077540389287 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 8695 9237 AVDDGVNTFK True PC9_epitope_Rep1 1064.5138388991602 1064.51274993586 40.382 2 0.12785687853257793 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000413611.2_1_1:146675128-146675437:-|nuORF'] 12570 17926 DLDLSPLEY True H1975_Epitope_Rep2 1063.50735653639 1063.50624993586 74.273 2 0.12785323400815943 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 24370 7449 FAEGQGRAL True PC9_epitope_Rep5 947.4824792012298 947.48138993586 33.606 2 0.12785229971908477 0.0013727077540389287 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 17436 11447 EHFPQAYSV True PC9_epitope_Rep6 1076.49270953176 1076.4916099358602 55.091 2 0.1278465581081206 0.0013727077540389287 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 106585 6090 SVYGYGVQK True NCI_RA007_Epitope_Rep4 999.5025459394698 999.50144993586 30.041 2 0.1278453259973031 0.0013727077540389287 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 8591 19880 AVAELNYGL True PC9_epitope_Rep5 948.4916469026 948.49109496793 81.521 1 0.12784268404002933 0.0013727077540389287 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 75629 10911 NQSDTSVSL True PC9_epitope_Rep5 949.43525422529 949.4347049679301 46.956 1 0.12784089738194393 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 39606 11398 HPLLGVSA True PC9_epitope_Rep3 792.4493881678001 792.4488349679301 48.846 1 0.12783917705583012 0.0013727077540389287 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 116506 19242 TYDRVESLF True PC9_epitope_Rep5 1128.54513902744 1128.5440499358601 79.053 2 0.12783802311475434 0.0013727077540389287 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 39392 15634 HLVPEVPTV True PC9_epitope_Rep4 989.55458151233 989.55348993586 68.061 2 0.1278255475833937 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 29603 22044 FVLDKVPFL True PC9_epitope_Rep3 1076.6270181766 1076.62592993586 90.089 2 0.12781429852680493 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 1878 5288 AEIINPKTA True H1975_Epitope_Rep2 955.53384606775 955.53274993586 25.401 2 0.127814007452572 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000075292|Q14966-3|ZNF638', 'ENSG00000075292|ENST00000264447|ZNF638', 'nc|ENSG00000075292|Q14966-5|ZNF638'] 1141 4900 AEAPQLRPA True H1975_Epitope_Rep2 951.5137793295099 951.51268993586 23.931 2 0.12781246775722666 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 74287 5838 NIIPASTGAAK True H1975_Epitope_Rep3 1041.58185888933 1041.5807699358602 27.47 2 0.12780716658347518 0.0013727077540389287 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000515281.1_1_11:88141588-88141981:-|nuORF', 'ENSG00000105679|ENST00000222286|GAPDHS'] 31611 8019 GEGGSFVDA True H1975_Epitope_Rep3 837.3504619721699 837.3499149679301 35.818 1 0.12780577995450854 0.0013727077540389287 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 105936 4631 SVLEPGTAK True NCI_RA007_Epitope_Rep4 900.4916469025999 900.49054993586 24.23 2 0.12780244918041536 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000157617|Q9Y426-2|C2CD2', 'nc|ENSG00000157617|Q9Y426-3|C2CD2', 'ENSG00000157617|ENST00000380486|C2CD2'] 70894 14536 MEIDPSLGV True H1975_Epitope_Rep3 959.46338354943 959.46283496793 61.281 1 0.12780198488775 0.0013727077540389287 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 115462 7041 TVFSHAQTV True PC9_epitope_Rep6 988.4977949121999 988.49668993586 36.088 2 0.12779067335791416 0.0013727077540389287 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 140731 13757 YYQHIVTTL True PC9_epitope_Rep4 1136.5866099166 1136.58550993586 60.812 2 0.12778729976529132 0.0013727077540389287 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 83740 6093 QEDAQRLYQA True H1975_Epitope_Rep2 1220.57856441404 1220.57746993586 28.413 2 0.12777548466768557 0.0013727077540389287 0.9438714419765777 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 41735 5023 IDNPTVDDR True NCI_RA007_Epitope_Rep2 1043.4883524273098 1043.48724993586 24.163 2 0.12776962763090036 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 103446 10437 SRAEDYEVL True PC9_epitope_Rep6 1080.50875351872 1080.5076499358602 50.899 2 0.12776821419858717 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117650|P51955-3|NEK2', 'nc|ENSG00000117650|P51955-2|NEK2', 'nc|ENSG00000117650|P51955-4|NEK2', 'ENSG00000117650|ENST00000366999|NEK2'] 47115 16480 IVWQEDPRL True PC9_epitope_Rep4 1154.6084079903396 1154.60730993586 71.362 2 0.12776652028055957 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8', 'ENST00000463593.6_1_9:95061133-95062278:-|nuORF', 'ENST00000544867.5_1_9:95060120-95062368:-|nuORF'] 106586 6007 SVYGYGVQK True NCI_RA007_Epitope_Rep5 999.5025459394698 999.50144993586 29.79 2 0.12776591882120214 0.0013727077540389287 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 37683 13290 HALGLLYHV True PC9_epitope_Rep6 1021.5709002828102 1021.56980993586 62.775 2 0.12776350417543078 0.0013727077540389287 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 1891 5105 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5971499358602 24.748 2 0.12775762781880406 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 87719 8930 QVEEELTHLQK True PC9_epitope_Rep2 1352.6935941662798 1352.69194490379 39.706 3 0.1277574473195212 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000167460|P67936-2|TPM4'] 91488 4591 RNVSTGDVNVE True NCI_RA007_Epitope_Rep3 1188.5734790335998 1188.5723899358602 24.955 2 0.1277550505348903 0.0013727077540389287 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 135844 11154 YEQLSSEALEA True H1975_Epitope_Rep2 1238.56666231766 1238.56607496793 47.941 1 0.12775202618889414 0.0013727077540389287 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 77579 10424 NYSSAVQKF True PC9_epitope_Rep1 1042.5083595959 1042.5072699358602 44.982 2 0.12775021628009675 0.0013727077540389287 0.9438714419765777 ['ENSG00000079482|ENST00000355520|OPHN1', 'nc|ENSG00000079482|O60890-2|OPHN1'] 40755 11794 HVADMLVKV True PC9_epitope_Rep4 1010.5582869937799 1010.55718993586 53.135 2 0.1277402909939141 0.0013727077540389287 0.9438714419765777 ['ENSG00000106144|ENST00000310447|CASP2', 'ENST00000472067.1_1_7:143000848-143002161:+|nuORF', 'ENST00000493642.5_1_7:142991831-143002161:+|nuORF'] 104834 15903 STEFNPLIY True H1975_Epitope_Rep2 1082.5284263341398 1082.52732993586 66.372 2 0.1277389319935095 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD', 'MADD|p.P469L|1|0.14|ENSG00000110514|chr11:47281690-47281690|C/T|missense_variant'] 8930 8567 AVGLVLPAK True NCI_RA007_Epitope_Rep3 866.5589386167799 866.55784993586 40.771 2 0.12772889655582528 0.0013727077540389287 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 73868 16047 NHFPGSFQI True PC9_epitope_Rep6 1045.49812926537 1045.4970299358602 74.049 2 0.12772682163729254 0.0013727077540389287 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 59800 6543 LHAQGDPAL True PC9_epitope_Rep2 920.4715801643599 920.47048993586 30.581 2 0.127719104247413 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000257365|P49356-2|FNTB', 'ENSG00000257365|ENST00000246166|FNTB'] 74423 20651 NIVNSIVGV True PC9_epitope_Rep2 913.5232813840499 913.52218993586 84.87 2 0.12771660646191055 0.0013727077540389287 0.9438714419765777 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10', 'SLC38A10|p.V758Cfs*76|1|0.35|ENSG00000157637|chr17:81246644-81246644|C/-|frameshift_variant'] 88845 4726 READGILKP True NCI_RA007_Epitope_Rep3 997.5556441414899 997.55454993586 25.537 2 0.12771402156585024 0.0013727077540389287 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 48510 11981 KEFPGFLEN True NCI_RA007_Epitope_Rep1 1079.5287606873098 1079.52766993586 50.59 2 0.12771124719348867 0.0013727077540389287 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 131859 19250 VYDGKFAIF True PC9_epitope_Rep4 1058.54368247546 1058.5425899358602 82.147 2 0.12770911343041078 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'ENST00000546884.1_1_12:56474084-56480451:+|nuORF', 'nc|ENSG00000065361|P21860-3|ERBB3', 'nc|ENSG00000065361|P21860-2|ERBB3'] 128778 5870 VSQVGKEL True PC9_epitope_Rep5 858.4810822188998 858.47998993586 27.571 2 0.12770159201304493 0.0013727077540389287 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 91822 8575 RPNDIM[Oxidation]AEV True PC9_epitope_Rep5 1059.50189469691 1059.5007899358602 37.925 2 0.1276970367702751 0.0013727077540389287 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 38719 20319 HHSSVIFIF True PC9_epitope_Rep1 1085.56581490237 1085.56470993586 82.986 2 0.12769280323672805 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 130741 10525 VVDPNDPQM True PC9_epitope_Rep2 1013.44879611445 1013.44768993586 45.807 2 0.12768936227127844 0.0013727077540389287 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 8371 13106 [Acetylation]-ATNFLAHEK True PC9_epitope_Rep1 1071.53490901321 1071.53380993586 55.279 2 0.12768243003812307 0.0013727077540389287 0.9438714419765777 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D', 'ENST00000530848.5_1_8:144663279-144679543:-|nuORF', 'ENST00000534232.5_1_8:144663861-144679543:-|nuORF'] 21768 11165 ESDEVELSY True H1975_Epitope_Rep3 1069.44515020265 1069.4445749679298 48.043 1 0.12768201537453225 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 132537 17059 VYPGDPLRF True PC9_epitope_Rep6 1062.5498304850598 1062.5487299358601 78.182 2 0.1276810582245117 0.0013727077540389287 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 105929 16876 SVLDVDGMKV True PC9_epitope_Rep6 1061.54269649929 1061.5415899358602 77.431 2 0.12767843314860353 0.0013727077540389287 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 21644 8789 ERTNIQVTV True PC9_epitope_Rep6 1058.57202248162 1058.57092993586 43.706 2 0.1276778008763103 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 38139 7083 HEQLRAVIV True H1975_Epitope_Rep3 1063.61382772395 1063.6127299358602 32.212 2 0.12767483199978313 0.0013727077540389287 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 110147 20912 TIDDGIFEV True PC9_epitope_Rep4 1007.48114178855 1007.48057496793 88.597 1 0.12766980641608472 0.0013727077540389287 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 103326 13997 SQVDRLVAL True PC9_epitope_Rep6 999.5712942056298 999.57018993586 65.697 2 0.12766851958346348 0.0013727077540389287 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 44652 10293 IPLDPVAGYK True H1975_Epitope_Rep1 1071.5964463243097 1071.5953499358602 44.536 2 0.12766562371230522 0.0013727077540389287 0.9438714419765777 ['CON__P12763'] 96402 5255 SEIDM[Oxidation]NDIK True NCI_RA007_Epitope_Rep2 1079.48049054599 1079.4793899358601 25.061 2 0.12766341511150467 0.0013727077540389287 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 93990 11667 RVPKTLVLV True PC9_epitope_Rep4 1023.6804507317898 1023.6793499358599 52.637 2 0.12765655968491968 0.0013727077540389287 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 110390 19744 TILRLLQQV True PC9_epitope_Rep4 1082.68117900778 1082.68008993586 84.069 2 0.12765315770702204 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 103710 12706 SREDSTMIL True PC9_epitope_Rep5 1050.5015599633 1050.50046993586 53.879 2 0.12764796062338604 0.0013727077540389287 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 115705 22256 TVLEQVLPI True PC9_epitope_Rep5 1010.6011973515798 1010.60010993586 90.615 2 0.12764769740285004 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 35932 19497 GVAPGFQVV True PC9_epitope_Rep3 872.4756029156399 872.4745099358599 80.227 2 0.12764751163611082 0.0013727077540389287 0.9438714419765777 ['ENSG00000165724|ENST00000298585|ZMYND19'] 74239 14887 NIDPITMAY True H1975_Epitope_Rep2 1036.48993265044 1036.4888299358602 62.417 2 0.12764565312467827 0.0013727077540389287 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 46450 10911 ITLTGVHQV True PC9_epitope_Rep4 966.5498304850602 966.54872993586 49.738 2 0.12763904620711067 0.0013727077540389287 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion'] 48691 4560 KEMELPAKEA True H1975_Epitope_Rep2 1144.5798102839997 1144.5781649037901 22.647 3 0.12763860045206002 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 94958 15181 RYPTSIASL True PC9_epitope_Rep1 1006.5447451046199 1006.54364993586 63.215 2 0.1276347960542053 0.0013727077540389287 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 103671 7000 SRDPSVIET True PC9_epitope_Rep1 1002.49818883502 1002.49708993586 31.73 2 0.1276323188495886 0.0013727077540389287 0.9438714419765777 ['ENSG00000172469|ENST00000358812|MANEA'] 140353 8118 YYEHVKARF True PC9_epitope_Rep5 1211.60874234351 1211.60710490379 36.165 3 0.12762506521329148 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 94279 20128 RWSPVRPLVF True PC9_epitope_Rep3 1255.71896149883 1255.7173049037901 82.676 3 0.1276248520653429 0.0013727077540389287 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 54432 9358 KYTHFIQSF True NCI_RA007_Epitope_Rep4 1169.5869442697697 1169.58584993586 42.85 2 0.12762385194098919 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000148288|Q8N5D6-3|GBGT1', 'ENSG00000148288|ENST00000372040|GBGT1'] 76808 11017 NVELDPEIQ True NCI_RA007_Epitope_Rep5 1055.51350454599 1055.51297496793 49.011 1 0.12761545040706793 0.0013727077540389287 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 29719 17706 FVPIKVEQI True PC9_epitope_Rep2 1071.63283183303 1071.6317299358602 73.389 2 0.1276134966262535 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 127544 19977 VQVPVPVTV True PC9_epitope_Rep2 936.5644179200399 936.56332993586 82.243 2 0.12761165338262426 0.0013727077540389287 0.9438714419765777 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 135801 5040 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 24.468 2 0.12760622441343467 0.0013727077540389287 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 137468 21968 YLPEELAAL True PC9_epitope_Rep1 1017.5382627418498 1017.53716993586 89.319 2 0.12760342094575086 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF', 'ENST00000582626.1_1_17:18160183-18162004:-|nuORF'] 110039 11659 THVSDTSVVL True PC9_epitope_Rep1 1056.54513902744 1056.5440499358601 49.724 2 0.12760050509282683 0.0013727077540389287 0.9438714419765777 ['ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q922U2'] 62780 14537 LMDHTIPEV True PC9_epitope_Rep4 1053.51648175145 1053.5153899358602 63.831 2 0.12759937956007597 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 49422 17874 KILQELPSV True PC9_epitope_Rep5 1025.6120963884498 1025.61098993586 73.771 2 0.12759834939406092 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 43132 8886 IGPLGLSPK True H1975_Epitope_Rep1 880.5382031722 880.53710993586 39.092 2 0.12759421840097523 0.0013727077540389287 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12'] 95117 8341 RYVPRASYF True NCI_RA007_Epitope_Rep2 1157.5981776598098 1157.5970899358601 37.084 2 0.12759087010509496 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 74381 18757 NITDKGIIAL True PC9_epitope_Rep1 1056.6179100448799 1056.6168099358601 76.937 2 0.12758758222328853 0.0013727077540389287 0.9438714419765777 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 71146 3984 M[Oxidation]EVEAPSKPA True H1975_Epitope_Rep2 1073.5063113710098 1073.5052099358602 20.393 2 0.12757914507219287 0.0013727077540389287 0.9438714419765777 ['ENSG00000278615|ENST00000524958|C11orf98', 'ENST00000532786.2_1_11:62430524-62432598:-|nuORF', 'ENST00000354588.7_1_11:62430524-62435168:-|nuORF'] 71327 18217 MHGIDPVVL True PC9_epitope_Rep5 979.5160878286299 979.51498993586 75.084 2 0.12756706066357712 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 105924 10152 SVLDSTAKV True PC9_epitope_Rep5 918.5022115863 918.50110993586 44.036 2 0.12756661399005462 0.0013727077540389287 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 16713 6004 EEVSVTVKA True H1975_Epitope_Rep1 960.5127762699999 960.51166993586 28.165 2 0.1275656049146759 0.0013727077540389287 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 76700 4703 NTNPNFVR True PC9_epitope_Rep4 960.4777281739599 960.47662993586 24.631 2 0.1275645348589344 0.0013727077540389287 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 23948 10874 EYNSDLHQF True PC9_epitope_Rep4 1151.4883524273098 1151.48724993586 49.59 2 0.12756250528275775 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 26951 20328 FLIQHLPLV True PC9_epitope_Rep4 1078.65390163078 1078.6528099358602 86.334 2 0.12756148656114394 0.0013727077540389287 0.9438714419765777 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 3243 5316 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 25.837 2 0.12755371058298562 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 40402 9075 HRVFVNRSL True PC9_epitope_Rep5 1126.63596015086 1126.63432490379 39.851 3 0.12755328894559928 0.0013727077540389287 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2'] 32678 11524 GHNLQTVQL True PC9_epitope_Rep5 1008.53524305008 1008.53414993586 49.324 2 0.12755094584763418 0.0013727077540389287 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 96567 11638 SELPTTVTV True H1975_Epitope_Rep3 945.50187723313 945.50132496793 49.901 1 0.12755079456916804 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 64774 14403 LRSDSYVEL True PC9_epitope_Rep5 1080.54513902744 1080.5440499358601 60.401 2 0.12754935639500192 0.0013727077540389287 0.9438714419765777 ['ENST00000463783.1_1_3:196666081-196669374:-|nuORF', 'nc|ENSG00000114503|P52298-3|NCBP2', 'ENSG00000114503|ENST00000321256|NCBP2', 'ENST00000468923.5_1_3:196664263-196669374:-|nuORF'] 102556 11492 SQANIAQVL True NCI_RA007_Epitope_Rep3 942.5134449763399 942.51234993586 52.316 2 0.12754849101725269 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 4719 17020 ALDSTNVEL True PC9_epitope_Rep5 960.47639076128 960.47528993586 70.486 2 0.1275376083489851 0.0013727077540389287 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 99938 17974 SLIGHLQTL True PC9_epitope_Rep2 980.5654805492001 980.56438993586 74.44 2 0.12753135351294254 0.0013727077540389287 0.9438714419765777 ['ENSG00000138166|ENST00000369583|DUSP5'] 11876 9158 DHNVSSVAI True PC9_epitope_Rep4 940.46140940348 940.46030993586 42.819 2 0.12752781798758622 0.0013727077540389287 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 96273 5262 SEESARLVAA True H1975_Epitope_Rep2 1031.5247379360299 1031.52364993586 25.308 2 0.12751308700602362 0.0013727077540389287 0.9438714419765777 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B'] 114430 10449 TSDVGGYYY True H1975_Epitope_Rep3 1023.4185415319901 1023.41797496793 45.252 1 0.1275130244750087 0.0013727077540389287 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 34618 18349 GQIDLLERL True PC9_epitope_Rep6 1055.59750895347 1055.59640993586 83.222 2 0.1275001000984958 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 90558 13990 RKFWAGIVF True NCI_RA007_Epitope_Rep4 1122.6338348925399 1122.6327299358602 61.083 2 0.1274982186145872 0.0013727077540389287 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1'] 132612 19792 VYPQYVIEY True PC9_epitope_Rep4 1172.57537652656 1172.5748749679299 84.256 1 0.12748808238751125 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 104122 19189 SRYPDQWIV True PC9_epitope_Rep1 1162.57710786206 1162.5760099358602 78.605 2 0.12748750529760058 0.0013727077540389287 0.9438714419765777 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 71427 23630 M[Oxidation]IPLLLAAL True PC9_epitope_Rep2 969.5932759006099 969.5921699358599 96.364 2 0.12748203247163867 0.0013727077540389287 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 107631 18489 TAIAGLTFL True H1975_Epitope_Rep2 905.52221875489 905.52167496793 76.721 1 0.12747393519732378 0.0013727077540389287 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 85117 17940 QISDTSVVL True PC9_epitope_Rep5 960.51277627 960.51166993586 74.023 2 0.12747259570117306 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 102760 3802 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 20.786 2 0.12747187394322473 0.0013727077540389287 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 89587 4440 RESKVVVPP True NCI_RA007_Epitope_Rep4 1009.5920296502098 1009.59092993586 23.446 2 0.12747043847815293 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 68799 19093 LVDQNIFSFY True H1975_Epitope_Rep2 1244.607739284 1244.60664993586 79.251 2 0.12745883925684143 0.0013727077540389287 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 3931 6850 AHDQNSNLL True PC9_epitope_Rep5 1010.47812209678 1010.47702993586 31.319 2 0.12745743206659244 0.0013727077540389287 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF'] 45245 14667 IRPENVIIY True PC9_epitope_Rep6 1115.6338944621898 1115.63278993586 68.34 2 0.1274525901305331 0.0013727077540389287 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 42903 7283 IFVGGIKEN True NCI_RA007_Epitope_Rep3 975.5389314481899 975.53782993586 35.757 2 0.12744672354913505 0.0013727077540389287 0.9438714419765777 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 75526 19911 NQLDSLM[Oxidation]GL True PC9_epitope_Rep5 1005.48009662317 1005.47898993586 81.643 2 0.12743780047624162 0.0013727077540389287 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 72103 15111 MRDPIRILV True PC9_epitope_Rep6 1111.65358436095 1111.65248993586 70.183 2 0.12743740758915958 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 45077 7621 IQRQETISL True NCI_RA007_Epitope_Rep3 1086.6033226099 1086.6022299358601 37.105 2 0.12743008008532936 0.0013727077540389287 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1', 'MX1|p.V216L|1|0.36|ENSG00000157601|chr21:41440941-41440941|G/T|missense_variant'] 131560 20220 VVVPTLDTV True PC9_epitope_Rep2 941.5433481222899 941.54224993586 83.193 2 0.12742837491526807 0.0013727077540389287 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 44939 9584 IQESNFDRV True PC9_epitope_Rep2 1106.5356369729 1106.53452993586 42.209 2 0.1274171916362922 0.0013727077540389287 0.9438714419765777 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 126197 17471 VPGLAILL True H1975_Epitope_Rep2 794.52657585934 794.5260249679301 72.495 1 0.12741020328718086 0.0013727077540389287 0.9438714419765777 ['ENSG00000178718|ENST00000322177|RPP25'] 40065 18939 HRALVAVLL True PC9_epitope_Rep5 990.6338348925399 990.63272993586 77.872 2 0.1274075768179234 0.0013727077540389287 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1', 'GCN1L1-CCND2|1|fusion'] 130750 9315 VVDPNDPQM True PC9_epitope_Rep6 1013.44879611445 1013.44768993586 45.997 2 0.12740663827400397 0.0013727077540389287 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 113854 12973 TREGGSIPVTL True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 57.795 2 0.12740646278726436 0.0013727077540389287 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 6116 8912 APNLQNQQV True PC9_epitope_Rep2 1010.5145076055 1010.51340993586 39.638 2 0.12740622929745832 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 30114 18553 FYPPKVELF True PC9_epitope_Rep6 1138.60628273202 1138.6051899358602 84.003 2 0.12740604998675925 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 96845 21555 SESPIVVVL True PC9_epitope_Rep1 941.5433481222899 941.54224993586 87.733 2 0.12740334914010565 0.0013727077540389287 0.9438714419765777 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 102469 7356 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 33.676 2 0.12739932051495237 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 21232 10846 ERFSTSQVL True PC9_epitope_Rep6 1065.54547338061 1065.54436993586 52.578 2 0.12737770021826467 0.0013727077540389287 0.9438714419765777 ['ENSG00000181481|ENST00000328381|RNF135'] 109470 6503 TGVPDRFTG True NCI_RA007_Epitope_Rep3 948.46649478392 948.46538993586 32.617 2 0.12737351963355598 0.0013727077540389287 0.9438714419765777 ['CON__Q05B55'] 136636 19430 YIDIDPLLY True H1975_Epitope_Rep2 1123.58012755383 1123.5795749679298 80.646 1 0.12737118645434017 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 60957 9767 LLAEPVPGIK True H1975_Epitope_Rep1 1035.6328318330297 1035.6317299358602 42.5 2 0.12737101333954928 0.0013727077540389287 0.9438714419765777 ['ENSG00000177889|ENST00000318066|UBE2N', 'nc|ENSG00000276380|Q5JXB2|UBE2NL'] 116176 17345 TVTITGIVKV True PC9_epitope_Rep4 1029.6433965167298 1029.6422899358602 74.721 2 0.12737048049331956 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 3957 15455 AHDVDPIEL True PC9_epitope_Rep5 1007.4923751785899 1007.49126993586 64.458 2 0.12736584468499282 0.0013727077540389287 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 21115 13020 ERDPSPWAV True PC9_epitope_Rep4 1055.50360856863 1055.5025099358602 57.977 2 0.12735836119037539 0.0013727077540389287 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 133529 17019 WHHTFYNEL True PC9_epitope_Rep3 1245.55670677065 1245.55560993586 70.618 2 0.12735138945621607 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 71976 12874 MPWGDPNYRSA True PC9_epitope_Rep6 1292.5608061749201 1292.5597099358602 61.039 2 0.12734991087964945 0.0013727077540389287 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114'] 127226 20842 VQIGDIVTV True PC9_epitope_Rep2 942.5385970950199 942.5380449679301 85.614 1 0.12734638967146955 0.0013727077540389287 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 28657 15580 FSSPHLVQV True PC9_epitope_Rep3 1012.5341804209198 1012.53308993586 65.077 2 0.12733989182122807 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 47331 20197 IYGYVAEQF True PC9_epitope_Rep2 1088.5178616504397 1088.51676993586 83.103 2 0.12733938998330463 0.0013727077540389287 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 9057 21837 AVITGFFTV True PC9_epitope_Rep4 953.5222187548899 953.52167496793 92.199 1 0.127339082100849 0.0013727077540389287 0.9438714419765777 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 103926 10209 SRPENAIIY True PC9_epitope_Rep2 1061.5505587610498 1061.54946993586 44.605 2 0.12733268353085347 0.0013727077540389287 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 43406 9926 IHSEPLGV True PC9_epitope_Rep5 850.45486747106 850.45376993586 43.152 2 0.1273204883786485 0.0013727077540389287 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 37539 21292 GYMEGYYTF True PC9_epitope_Rep3 1129.44264810485 1129.4415499358602 87.194 2 0.12731845006028747 0.0013727077540389287 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 20993 6646 ERAPGETAL True PC9_epitope_Rep1 942.4770594676199 942.47596993586 30.368 2 0.12731444693012614 0.0013727077540389287 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 8986 10159 AVHETLVAV True PC9_epitope_Rep6 937.5232813840498 937.52218993586 49.704 2 0.12730948059073047 0.0013727077540389287 0.9438714419765777 ['SLC39A3|p.V234Sfs*3|1|0.26|ENSG00000141873|chr19:2732996-2732996|C/-|frameshift_variant', 'ENSG00000141873|ENST00000269740|SLC39A3'] 97993 13027 SHSNIIAGI True PC9_epitope_Rep5 910.4872302284999 910.48612993586 55.113 2 0.12730574398892858 0.0013727077540389287 0.9438714419765777 ['ENSG00000123983|ENST00000357430|ACSL3'] 136316 10703 YGYHDFGSS True PC9_epitope_Rep5 1031.3984747937498 1031.39736993586 46.158 2 0.12730549378126826 0.0013727077540389287 0.9438714419765777 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'ENST00000592763.5_1_19:10795072-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 37696 19792 HAMTEFLEV True PC9_epitope_Rep1 1075.50083168731 1075.4997299358602 80.951 2 0.12729914814192783 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 1144 6119 AEAPSPAPTP True H1975_Epitope_Rep2 936.4552613938799 936.45416993586 28.515 2 0.12729687778453247 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'ENST00000525051.5_1_8:144873596-144874681:-|nuORF'] 52474 8474 KPKVIIVQA True PC9_epitope_Rep5 994.6539016307798 994.65280993586 37.538 2 0.1272938004171788 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF'] 103239 16759 SQSSLIHLV True PC9_epitope_Rep1 982.5447451046201 982.54364993586 69.288 2 0.1272931376102357 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ACOT7|p.R364Gfs*5|1|0.24|ENSG00000097021|chr1:6264651-6264651|C/-|frameshift_variant', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 84835 9680 QHLQATGVSL True PC9_epitope_Rep6 1052.56145779792 1052.56036993586 47.613 2 0.12728267688385955 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 77551 22050 NYSGAAEYLYF True PC9_epitope_Rep5 1296.56626839484 1296.56567496793 89.842 1 0.1272823989434487 0.0013727077540389287 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 94911 14476 RYPDRITLI True PC9_epitope_Rep2 1145.65569253593 1145.65405490379 60.952 3 0.12728193760217318 0.0013727077540389287 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 73158 8914 NEDLRSWTA True H1975_Epitope_Rep2 1090.50433684462 1090.5032299358602 39.25 2 0.12728070616737583 0.0013727077540389287 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 7138 11385 AQYEHDLEVA True PC9_epitope_Rep1 1173.5302172392899 1173.52912993586 48.673 2 0.12727780562757685 0.0013727077540389287 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 70011 17486 LYGKIAEAF True PC9_epitope_Rep1 1010.5436824754598 1010.54258993586 72.055 2 0.1272761633175709 0.0013727077540389287 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 111182 21011 TLFEDSFQQI True PC9_epitope_Rep4 1226.58191845898 1226.58082993586 88.98 2 0.12727150130560566 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'WWP1|p.K872Vfs*4|1|0.15|ENSG00000123124|chr8:86461789-86461790|AA/-|frameshift_variant', 'ENSG00000123124|ENST00000517970|WWP1', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'ITCH-NCOA6|2|fusion', 'nc|ENSG00000289720|Q96J02-3|ITCH'] 31771 10926 GELLFVHSA True NCI_RA007_Epitope_Rep5 971.50763131991 971.50652993586 48.666 2 0.12727006782504777 0.0013727077540389287 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 33402 18047 GLFIIDGK True PC9_epitope_Rep2 861.4960040070499 861.49490993586 74.722 2 0.12726939848421723 0.0013727077540389287 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF'] 57191 7396 LEESSPKLP True H1975_Epitope_Rep2 998.5284263341399 998.5273299358599 33.391 2 0.12726915379259796 0.0013727077540389287 0.9438714419765777 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000544007.5_1_14:31028384-31077115:+|nuORF'] 76204 12658 NRVSGGLEVL True PC9_epitope_Rep4 1042.5771078620598 1042.5760099358602 56.527 2 0.12726179853289885 0.0013727077540389287 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF'] 103306 9296 SQTTVYEKL True PC9_epitope_Rep2 1067.54989005471 1067.5487899358602 41.097 2 0.12726054852742238 0.0013727077540389287 0.9438714419765777 ['ENSG00000118193|ENST00000367350|KIF14'] 24273 21625 FAAFLPEFL True H1975_Epitope_Rep2 1053.55351888317 1053.5524299358601 89.461 2 0.12725998161004393 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 103318 16314 SQVDRLVAL True PC9_epitope_Rep3 999.5712942056298 999.57018993586 67.887 2 0.12725840899631996 0.0013727077540389287 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 14863 13403 DYFEQYGK True PC9_epitope_Rep3 1048.4501760134401 1048.44906993586 56.587 2 0.12725183816593033 0.0013727077540389287 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 2470 6425 AEQPPHLTP True H1975_Epitope_Rep3 988.4977949122 988.49668993586 29.69 2 0.1272513975885078 0.0013727077540389287 0.9438714419765777 ['ENSG00000146733|ENST00000275605|PSPH'] 132708 19692 VYSEVAAYEF True PC9_epitope_Rep4 1176.5339056373998 1176.53280993586 83.866 2 0.12724907764490276 0.0013727077540389287 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 17588 16510 EHLQVITTL True PC9_epitope_Rep2 1052.5866099166 1052.58550993586 68.748 2 0.12724380064515484 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 73155 8860 NEDLRSWTA True H1975_Epitope_Rep1 1090.50433684462 1090.5032299358602 38.996 2 0.12724028356998984 0.0013727077540389287 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 135189 10394 YAVEGRDL True PC9_epitope_Rep1 921.4555957470499 921.45448993586 44.865 2 0.12723801012593236 0.0013727077540389287 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 98029 16666 SHTDVVPVF True PC9_epitope_Rep3 999.50254593947 999.50144993586 69.242 2 0.12722758898607184 0.0013727077540389287 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 2455 9489 AEQNIIPSA True H1975_Epitope_Rep1 941.4818104948899 941.48070993586 41.419 2 0.12722526872125298 0.0013727077540389287 0.9438714419765777 ['ENSG00000183508|ENST00000369448|TENT5C'] 17401 7189 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.53465490379 32.465 3 0.12722515816356839 0.0013727077540389287 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 102872 15824 SQHGVIIQL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 65.858 2 0.12722338583494391 0.0013727077540389287 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 48951 5912 KEYGQTMTV True NCI_RA007_Epitope_Rep3 1055.49574630687 1055.49464993586 30.231 2 0.12722071535046975 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117595|O14896-2|IRF6', 'IRF6|p.P426Sfs*9|1|0.1|ENSG00000117595|chr1:209788543-209788549|GTCTGGG/-|frameshift_variant', 'ENSG00000117595|ENST00000367021|IRF6'] 74544 11397 NLAENISRV True PC9_epitope_Rep4 1014.54580773378 1014.5447099358599 51.609 2 0.12721929720669375 0.0013727077540389287 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 71379 11199 MIDPSGVSY True H1975_Epitope_Rep2 967.4320834211501 967.43153496793 48.116 1 0.12721246766653257 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 156 11075 AADPSVVNL True H1975_Epitope_Rep3 884.46034677432 884.45924993586 47.692 2 0.1272103638838205 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 94672 7782 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.61488490379 36.635 3 0.12720705755249584 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 12380 9173 DKDDTQQIL True PC9_epitope_Rep4 1074.51931820242 1074.51822993586 42.879 2 0.12720624853715637 0.0013727077540389287 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 38535 5820 HHEAGVTAL True PC9_epitope_Rep5 933.4668291370899 933.4657299358599 27.38 2 0.12720555729328356 0.0013727077540389287 0.9438714419765777 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 108362 5242 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 25.25 2 0.12720104640527513 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 38738 5632 HHTTQQTFL True PC9_epitope_Rep2 1111.54105670651 1111.53994993586 27.048 2 0.12718060910219148 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 14849 14134 DYFEEYGK True PC9_epitope_Rep3 1049.4341915961297 1049.4330899358602 59.451 2 0.12717885652316369 0.0013727077540389287 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 7695 9710 ASQDIIPQLK True NCI_RA007_Epitope_Rep3 1111.62372370131 1111.62262993586 45.267 2 0.12717866826286686 0.0013727077540389287 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 75531 22070 NQLDSLMGL True PC9_epitope_Rep3 989.48518162317 989.48408993586 90.189 2 0.1271776842477386 0.0013727077540389287 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 42539 8538 IESDPVTPP True H1975_Epitope_Rep3 953.47057710485 953.47002496793 37.829 1 0.12717564961750355 0.0013727077540389287 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 10090 9264 AYVHM[Oxidation]VTHF True PC9_epitope_Rep5 1119.5171508382302 1119.51604993586 40.582 2 0.12717209389679504 0.0013727077540389287 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 94553 9618 RYIPTAAAF True NCI_RA007_Epitope_Rep3 1008.5392658013599 1008.53816993586 44.914 2 0.1271688763702447 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 90724 8647 RKPIDYTVL True NCI_RA007_Epitope_Rep4 1103.63389446219 1103.63278993586 40.043 2 0.12716163667339314 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 85320 15827 QLANEEIAQV True PC9_epitope_Rep1 1113.56660274801 1113.56550993586 65.692 2 0.12714259287104127 0.0013727077540389287 0.9438714419765777 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|5|fusion', 'FGFR3-TACC3|2|fusion', 'FGFR3-TACC3|9|fusion', 'FGFR3-TACC3|14|fusion', 'FGFR3-TACC3|6|fusion', 'FGFR3-TACC3|4|fusion', 'FGFR3-TACC3|1|fusion', 'FGFR3-TACC3|13|fusion', 'FGFR3-TACC3|3|fusion', 'FGFR3-TACC3|15|fusion', 'ENST00000484264.1_1_4:1746256-1746676:+|nuORF', 'ENSG00000013810|ENST00000313288|TACC3'] 71466 18971 MKFNPFVTSD True PC9_epitope_Rep2 1184.5535955361597 1184.5524899358602 78.338 2 0.1271411659006987 0.0013727077540389287 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 14270 4319 DSYVGDEAQSK True PC9_epitope_Rep4 1197.51496109797 1197.5138699358602 23.035 2 0.1271371312358316 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 28475 9845 FSERSNPFY True H1975_Epitope_Rep2 1145.51417325233 1145.5130699358601 42.855 2 0.12713103746944943 0.0013727077540389287 0.9438714419765777 ['ENSG00000133997|ENST00000256379|MED6', 'nc|ENSG00000133997|O75586-2|MED6', 'ENST00000556044.5_1_14:71060086-71067354:-|nuORF', 'ENST00000556423.1_1_14:71063310-71067354:-|nuORF', 'ENST00000553611.5_1_14:71060082-71067354:-|nuORF', 'ENST00000554870.5_1_14:71059985-71067354:-|nuORF', 'ENST00000556495.5_1_14:71059591-71067354:-|nuORF', 'nc|ENSG00000133997|O75586-3|MED6'] 106430 11650 SVTSHIYQV True PC9_epitope_Rep5 1032.5240096600398 1032.52290993586 49.807 2 0.1271308119078697 0.0013727077540389287 0.9438714419765777 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 31951 6059 GESDRVFAT True H1975_Epitope_Rep3 980.45632402304 980.45522993586 28.318 2 0.12712971691468003 0.0013727077540389287 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 123097 16584 VHAPPMQLGF True PC9_epitope_Rep6 1095.5535359665098 1095.5524299358601 76.237 2 0.12712875838964938 0.0013727077540389287 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 57662 6432 LEMESGASA True H1975_Epitope_Rep3 893.3800478482899 893.3794949679301 29.717 1 0.12712226819457506 0.0013727077540389287 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'ENST00000569825.1_1_16:70287541-70292096:-|nuORF'] 37744 12059 HAVGDIPGV True PC9_epitope_Rep3 863.45011644379 863.44900993586 51.426 2 0.12711321287053337 0.0013727077540389287 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 130420 11067 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 49.203 2 0.1271047649624015 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 87666 21423 QVAVAGLLTV True PC9_epitope_Rep2 969.58588164061 969.58478993586 87.876 2 0.12710357280742204 0.0013727077540389287 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 125985 10110 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.49088993586 44.225 2 0.12710084746117445 0.0013727077540389287 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 136832 22313 YIVDLLTHL True PC9_epitope_Rep3 1085.61209638845 1085.61098993586 91.112 2 0.12709872032341687 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2', 'GFOD2|p.V233Cfs*3|1|0.17|ENSG00000141098|chr16:67675617-67675618|-/C|frameshift_variant'] 75023 14598 NMDNMFESY True H1975_Epitope_Rep2 1149.41069635357 1149.4101749679298 61.309 1 0.12709076841992129 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 95165 18184 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41211496793 74.735 1 0.12708899494762083 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 42635 5090 IETNHNLPP True H1975_Epitope_Rep2 1033.5192586327698 1033.5181699358602 24.66 2 0.12708888634831195 0.0013727077540389287 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 130438 16547 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 68.885 2 0.12708857662788708 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 36389 19646 GVIAEILRGV True PC9_epitope_Rep6 1025.6233297784897 1025.62222993586 88.227 2 0.12708236028516517 0.0013727077540389287 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 3986 20540 AHFPINVVI True PC9_epitope_Rep1 1008.5756513100799 1008.57454993586 83.819 2 0.12708230059916717 0.0013727077540389287 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 417 19930 AALPNVYEV True PC9_epitope_Rep3 974.5072969667399 974.50618993586 81.904 2 0.12708093675852092 0.0013727077540389287 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 123411 9486 VIDQQNGLY True H1975_Epitope_Rep2 1048.5189242795998 1048.51837496793 41.457 1 0.1270750601197018 0.0013727077540389287 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 94959 15278 RYPTSIASL True PC9_epitope_Rep1 1006.5447451046199 1006.54364993586 63.589 2 0.12707064767931694 0.0013727077540389287 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3', 'ENST00000481952.1_1_10:124921781-124922345:+|nuORF'] 129437 12167 VTEKDLLLY True H1975_Epitope_Rep3 1092.60667665484 1092.60617496793 51.972 1 0.12707030082777301 0.0013727077540389287 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 113092 19488 TPYNYPVPV True PC9_epitope_Rep5 1048.5229470308798 1048.5223749679299 80.015 1 0.12707007463199924 0.0013727077540389287 0.9438714419765777 ['ENSG00000170906|ENST00000485876|NDUFA3'] 3916 12548 AHDGGIYAL True PC9_epitope_Rep3 915.44503106335 915.44392993586 53.287 2 0.12706187028431074 0.0013727077540389287 0.9438714419765777 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 61207 15973 LLDPASFEY True H1975_Epitope_Rep3 1053.50187723313 1053.50137496793 66.897 1 0.127054098171178 0.0013727077540389287 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 59903 20338 LHIDPNFASL True PC9_epitope_Rep1 1125.58185888933 1125.5807699358602 83.06 2 0.12705317376652178 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 45853 11255 ISQIVSSITAS True H1975_Epitope_Rep1 1104.60265390356 1104.60154993586 48.269 2 0.1270500261600988 0.0013727077540389287 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 21095 7926 ERDPHEEIL True PC9_epitope_Rep1 1136.5462016566 1136.5445549037902 35.311 3 0.12703714039636216 0.0013727077540389287 0.9438714419765777 ['ENSG00000153140|ENST00000283122|CETN3'] 65180 15345 LSDVFPGVQY True H1975_Epitope_Rep1 1123.5549754351498 1123.55447496793 64.293 1 0.12703671254558319 0.0013727077540389287 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 8451 4897 ATSPVVYTR True NCI_RA007_Epitope_Rep3 992.52909504048 992.52798993586 26.252 2 0.1270326701606102 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 43340 17566 IHIITGVAV True PC9_epitope_Rep1 921.5647522732099 921.56364993586 72.361 2 0.12702210273623296 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 74235 14661 NIDPITMAY True H1975_Epitope_Rep1 1036.48993265044 1036.48937496793 61.608 1 0.12701499160188534 0.0013727077540389287 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 118467 7047 [Acetylation]-VDREQLVQK True NCI_RA007_Epitope_Rep1 1155.62478664677 1155.62368993586 31.406 2 0.12700607147509854 0.0013727077540389287 0.9438714419765777 ['ENSG00000170027|ENST00000307630|YWHAG'] 77422 18487 NYMPGQLTI True PC9_epitope_Rep6 1035.5059170677498 1035.50480993586 83.75 2 0.12700113748489414 0.0013727077540389287 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 46190 7576 ITDHLDTQY True H1975_Epitope_Rep2 1104.5087535187201 1104.5076499358602 34.093 2 0.12699299526865243 0.0013727077540389287 0.9438714419765777 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 72086 12610 M[Oxidation]RDPIRILV True PC9_epitope_Rep6 1127.64849936095 1127.6474099358602 59.962 2 0.1269886555627783 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 6477 7254 APTGDLPRA True PC9_epitope_Rep1 896.4715801643599 896.47048993586 32.716 2 0.12697854580645587 0.0013727077540389287 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 32696 8670 GHSEAVISV True PC9_epitope_Rep2 897.45559574705 897.45448993586 38.714 2 0.126977438379576 0.0013727077540389287 0.9438714419765777 ['ENSG00000073536|ENST00000442241|NLE1', 'ENST00000593176.1_1_17:33464206-33469153:-|nuORF'] 25533 5212 FEQGGARVV True H1975_Epitope_Rep2 961.4981292653698 961.49702993586 25.116 2 0.12697501725311436 0.0013727077540389287 0.9438714419765777 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 22406 16212 ETEYSFLDY True H1975_Epitope_Rep1 1165.4815357113698 1165.48097496793 67.708 1 0.12697239423405546 0.0013727077540389287 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 94659 8302 RYLEKPMEI True NCI_RA007_Epitope_Rep1 1177.6165301458898 1177.61488490379 36.294 3 0.12696928418348563 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 95098 14417 RYTFGAALF True NCI_RA007_Epitope_Rep4 1044.5392658013598 1044.5381699358602 62.776 2 0.12696562057653052 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000066405|P56856-2|CLDN18', 'ENSG00000066405|ENST00000183605|CLDN18'] 105087 20666 STLDGVLEV True PC9_epitope_Rep2 931.48622716899 931.4856749679301 84.928 1 0.12696556041751977 0.0013727077540389287 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6'] 74577 13570 NLDIIQQEY True H1975_Epitope_Rep3 1134.55570371114 1134.55517496793 57.479 1 0.12696330924192273 0.0013727077540389287 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 38686 4309 HHSDGSVSL True PC9_epitope_Rep3 937.42535824793 937.42426993586 21.684 2 0.12695797374689288 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 13186 17250 DLTDYLM[Oxidation]K True PC9_epitope_Rep2 1013.47394861357 1013.47284993586 71.612 2 0.12694522178440815 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 20613 7029 EQEVNILK True H1975_Epitope_Rep3 971.5287606873098 971.52766993586 31.999 2 0.12694390404785047 0.0013727077540389287 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 27091 20730 FLPSYIIDV True PC9_epitope_Rep6 1065.57464825057 1065.57354993586 92.498 2 0.12693923850721478 0.0013727077540389287 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 131842 9499 VYASDRATF True PC9_epitope_Rep1 1028.4927095317598 1028.4916099358602 41.394 2 0.12693322640309218 0.0013727077540389287 0.9438714419765777 ['ENST00000464583.5_1_6:4119386-4125894:-|nuORF', 'ENST00000496241.6_1_6:4116110-4130478:-|nuORF', 'ENST00000464057.5_1_6:4116110-4125894:-|nuORF', 'ENST00000380120.6_1_6:4116110-4130812:-|nuORF', 'nc|ENSG00000198721|O75521-2|ECI2', 'ENSG00000198721|ENST00000380118|ECI2'] 71942 19106 MPTLPPPSV True PC9_epitope_Rep3 937.49428975489 937.49318993586 78.715 2 0.12692713616205784 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 109882 12234 THMTAIVGM True PC9_epitope_Rep6 959.4568587003499 959.45576993586 58.433 2 0.12692679876739546 0.0013727077540389287 0.9438714419765777 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 96183 11583 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.45890993586 49.618 2 0.1269240338465158 0.0013727077540389287 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 52839 15251 KQVSDLISV True PC9_epitope_Rep5 987.5600608155898 987.55896993586 63.672 2 0.12691012426131248 0.0013727077540389287 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 118707 4346 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 21.834 2 0.12689885108461357 0.0013727077540389287 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 38504 4520 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 23.875 2 0.12689564660969563 0.0013727077540389287 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 12569 17828 DLDLSPLEY True H1975_Epitope_Rep1 1063.50735653639 1063.50677496793 74.242 1 0.1268917756107064 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 101670 12394 SPFRVNVGA True PC9_epitope_Rep5 945.5032146458099 945.50210993586 52.67 2 0.12689153365410824 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.N756K|1|0.07|ENSG00000196924|chrX:154364034-154364034|G/T|missense_variant'] 94419 15062 RYFENPQVI True PC9_epitope_Rep2 1164.5927579262 1164.5916699358602 63.193 2 0.12688756239121332 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 7156 9450 ARADSYYEY True PC9_epitope_Rep2 1136.47745339044 1136.47634993586 41.688 2 0.12688101786992612 0.0013727077540389287 0.9438714419765777 ['ENSG00000177239|ENST00000371589|MAN1B1', 'ENST00000480100.3_1_9:140000303-140000768:+|nuORF', 'ENST00000535028.5_1_9:140000303-140001810:+|nuORF'] 22347 3712 ETEKM[Oxidation]IEKY True H1975_Epitope_Rep3 1185.5587408666897 1185.5576499358601 19.339 2 0.12688086392363443 0.0013727077540389287 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 106384 19273 SVSTQLSLV True PC9_epitope_Rep5 932.51786165044 932.51676993586 79.177 2 0.126879838989692 0.0013727077540389287 0.9438714419765777 ['ENSG00000214194|ENST00000397764|SMIM30'] 132096 21835 VYILQPEVI True PC9_epitope_Rep1 1072.6168474157198 1072.61627496793 88.798 1 0.12687832513126296 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 131360 10762 VVSEGVPRI True PC9_epitope_Rep4 954.5498304850599 954.54872993586 49.153 2 0.12687638281395786 0.0013727077540389287 0.9438714419765777 ['ENSG00000186222|ENST00000320776|BLOC1S4'] 72487 11410 M[Oxidation]VAPAVASV True PC9_epitope_Rep4 859.4473399429099 859.44679496793 51.659 1 0.12686893238498545 0.0013727077540389287 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 76563 17462 NTDSLDWALY True H1975_Epitope_Rep2 1196.5349682665599 1196.53437496793 72.459 1 0.12686815715007754 0.0013727077540389287 0.9438714419765777 ['ENSG00000108561|ENST00000225698|C1QBP'] 135547 6242 YEEGPGKNLP True H1975_Epitope_Rep1 1102.5294889632999 1102.52897496793 29.077 1 0.12686495275012438 0.0013727077540389287 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 114896 6545 TTEFSVDAR True H1975_Epitope_Rep3 1024.4825387708797 1024.4814499358602 30.143 2 0.1268335992942994 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 21175 9151 EREKWIHAL True PC9_epitope_Rep4 1180.63529144452 1180.6336349037902 42.79 3 0.12682266653126334 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 24504 22111 FAISILQQL True PC9_epitope_Rep4 1031.60153170475 1031.60097496793 93.267 1 0.12682227654100753 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 62998 11455 LNFAVASR True PC9_epitope_Rep1 876.48175092524 876.48064993586 48.939 2 0.12681823068217893 0.0013727077540389287 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 38008 7376 HEIEGTGLP True H1975_Epitope_Rep2 951.4661604307499 951.46506993586 33.312 2 0.12681131731505052 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'NIBAN2|p.M44I|1|0.79|ENSG00000136830|chr9:127531702-127531702|C/T|missense_variant'] 88914 4695 RECTIEATA True NCI_RA007_Epitope_Rep3 992.4596951513198 992.45858993586 25.412 2 0.12680700258457892 0.0013727077540389287 0.9438714419765777 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 113894 12359 TRHPFLTSL True PC9_epitope_Rep2 1070.58727862294 1070.5861899358601 52.848 2 0.12680349983226924 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117020|Q9Y243-2|AKT3', 'ENSG00000117020|ENST00000673466|AKT3'] 59832 15601 LHDSSDYLL True PC9_epitope_Rep3 1061.50293986229 1061.50184993586 65.159 2 0.12680263973640102 0.0013727077540389287 0.9438714419765777 ['ENSG00000143418|ENST00000368954|CERS2', 'ENST00000482825.7_1_1:150939531-150940017:-|nuORF', 'ENST00000558501.5_1_19:8275630-8321979:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF'] 85363 10868 QLDTHMELY True H1975_Epitope_Rep2 1148.51721002744 1148.5161099358602 46.833 2 0.12680201949005054 0.0013727077540389287 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 52220 13910 KMWEEAISL True NCI_RA007_Epitope_Rep1 1105.5477818797299 1105.54668993586 58.129 2 0.12680170026365833 0.0013727077540389287 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 106853 23042 SYIDVLPEF True PC9_epitope_Rep5 1081.53317736141 1081.53267496793 93.622 1 0.12678830843069205 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 74229 14216 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 59.832 2 0.12678362294852405 0.0013727077540389287 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 89605 11617 RESSLILAV True NCI_RA007_Epitope_Rep4 986.5760452328999 986.57494993586 51.638 2 0.1267810661697681 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2'] 102512 9822 SPYSGPKFNSA True PC9_epitope_Rep5 1153.54038800017 1153.53928993586 42.747 2 0.12677786639994293 0.0013727077540389287 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 76856 21562 NVIDYIDTI True PC9_epitope_Rep4 1064.53899101784 1064.5378899358602 91.118 2 0.12676451512706247 0.0013727077540389287 0.9438714419765777 ['ENSG00000156017|ENST00000376834|CARNMT1'] 45140 21314 IQYIPTELDQV True PC9_epitope_Rep3 1317.68163250025 1317.68052993586 87.279 2 0.12676339853484203 0.0013727077540389287 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 130816 20696 VVFEIQGTTV True PC9_epitope_Rep3 1091.58627556343 1091.5851699358602 84.881 2 0.12676064399823622 0.0013727077540389287 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 75904 5627 NRDRTQIAL True PC9_epitope_Rep4 1085.59415490853 1085.59304993586 28.442 2 0.12675902957651983 0.0013727077540389287 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 49034 8867 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 44.042 2 0.12675274448062285 0.0013727077540389287 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 104917 6165 STFSAPLNK True NCI_RA007_Epitope_Rep3 963.50254593947 963.50144993586 31.249 2 0.12673943246866337 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 25068 12359 FDEILEASD True H1975_Epitope_Rep1 1037.4553209635299 1037.45477496793 52.57 1 0.1267309151583904 0.0013727077540389287 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM'] 53348 13862 KTSESSTILVV True PC9_epitope_Rep3 1162.64451871554 1162.64342993586 58.401 2 0.12672750973910057 0.0013727077540389287 0.9438714419765777 ['ENSG00000203926|ENST00000370518|SPANXA2', 'ENSG00000198573|ENST00000358993|SPANXC', 'ENSG00000198021|ENST00000370519|SPANXA1', 'ENSG00000196406|ENST00000370515|SPANXD', 'ENSG00000227234|ENST00000449283|SPANXB1'] 39999 17975 HQSGIVQLL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 73.933 2 0.1267247388458289 0.0013727077540389287 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 67818 22912 LTIEDGIFEV True PC9_epitope_Rep1 1134.58085582982 1134.5802749679299 92.929 1 0.12671546234784087 0.0013727077540389287 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 40684 4792 HTLNQIDSVK True PC9_epitope_Rep4 1153.6091362663299 1153.60802993586 25.006 2 0.12670744741224926 0.0013727077540389287 0.9438714419765777 ['CON__P12763'] 73818 11189 NHDTGEYVL True PC9_epitope_Rep5 1046.46688870674 1046.4657899358601 48.026 2 0.12670632073695892 0.0013727077540389287 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 108368 9124 TEDPNQLTV True H1975_Epitope_Rep2 1015.4822044177099 1015.4816749679301 40.047 1 0.12670167656035355 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2', 'NFE2L2|p.S270L|1|0.31|ENSG00000116044|chr2:177231794-177231794|G/A|missense_variant'] 129911 6904 VTLTSEEEAR True PC9_epitope_Rep5 1133.5564319871298 1133.55532993586 31.526 2 0.12669624898849413 0.0013727077540389287 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 37524 14527 GYLADPAKF True PC9_epitope_Rep4 980.4967322830399 980.49562993586 63.794 2 0.12669285485533624 0.0013727077540389287 0.9438714419765777 ['ENSG00000137547|ENST00000260102|MRPL15'] 77565 14811 NYSPYVNYF True NCI_RA007_Epitope_Rep3 1165.50802524273 1165.5069299358602 65.684 2 0.12668929853770272 0.0013727077540389287 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 38706 15354 HHSNILLTF True PC9_epitope_Rep4 1080.5716285588 1080.5705299358601 66.991 2 0.12668708920622462 0.0013727077540389287 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 106021 12658 SVLNLVIVK True NCI_RA007_Epitope_Rep3 983.6379172134699 983.63682993586 57.033 2 0.12668676681513033 0.0013727077540389287 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 130457 16119 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 69.941 2 0.12667508601979613 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 27317 13206 FM[Oxidation]DPASALY True H1975_Epitope_Rep3 1029.44773386573 1029.4471749679299 56.052 1 0.1266724097431282 0.0013727077540389287 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 60965 18047 LLAESVTEV True PC9_epitope_Rep5 959.5175272972699 959.51642993586 74.432 2 0.12667150111745876 0.0013727077540389287 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 136193 17676 YGLDYVHNL True PC9_epitope_Rep4 1092.52400966004 1092.52290993586 76.015 2 0.1266695398494303 0.0013727077540389287 0.9438714419765777 ['ENSG00000212907|ENST00000361335|MT-ND4L'] 135507 13848 YEDSGIPLP True H1975_Epitope_Rep2 989.4705771048499 989.47002496793 58.412 1 0.1266574707774878 0.0013727077540389287 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 9169 13566 AVNPKFLAV True PC9_epitope_Rep6 957.5647522732099 957.56364993586 63.917 2 0.12665240109224107 0.0013727077540389287 0.9438714419765777 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 106876 21473 SYIEHIFEI True PC9_epitope_Rep3 1149.57062549929 1149.57007496793 87.887 1 0.1266338235382952 0.0013727077540389287 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 130447 16920 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 70.241 2 0.12663357088663016 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 25440 15400 FELPQTPLA True H1975_Epitope_Rep2 1014.5385970950199 1014.53750993586 64.395 2 0.12663295869204527 0.0013727077540389287 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 139056 11457 YSLDHISSL True H1975_Epitope_Rep2 1033.5080252427301 1033.5069299358602 49.124 2 0.1266236584260083 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 78172 6094 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 30.957 2 0.12662172836946187 0.0013727077540389287 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 71383 11152 MIDPSGVSY True H1975_Epitope_Rep3 967.4320834211501 967.43098993586 47.991 2 0.12661923592476518 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 125966 9263 VPAGGAVAV True PC9_epitope_Rep4 739.42283906679 739.42229496793 43.228 1 0.12661297207546515 0.0013727077540389287 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 24312 18680 FADGFVLVY True H1975_Epitope_Rep1 1029.51713337445 1029.51657496793 77.9 1 0.12661261796315235 0.0013727077540389287 0.9438714419765777 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 88373 6398 QYNPHVHQL True PC9_epitope_Rep5 1134.55704112382 1134.55540490379 29.586 3 0.1266084955485842 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 25519 7375 FEQEMATAA True NCI_RA007_Epitope_Rep3 996.4222470134398 996.4216949679301 36.136 1 0.12660200184656073 0.0013727077540389287 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 120796 16720 VGDAIPAVEVF True H1975_Epitope_Rep1 1115.58627556343 1115.5851699358602 69.711 2 0.12659603212484777 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5'] 138785 16781 YSDEFGNLDF True H1975_Epitope_Rep1 1205.4876837209702 1205.4871749679298 69.949 1 0.1265863863793314 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 140885 18067 YYTTPIYRF True PC9_epitope_Rep4 1222.60225998074 1222.60116993586 77.556 2 0.12658586657879836 0.0013727077540389287 0.9438714419765777 ['ENSG00000104957|ENST00000221554|YJU2B'] 53275 19152 KTIEDTLMTV True PC9_epitope_Rep2 1149.59512599497 1149.5940299358601 79.039 2 0.12658378799091 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 37981 10589 HEGLPGLAV True H1975_Epitope_Rep3 891.4814165720699 891.48030993586 45.8 2 0.12658182064138018 0.0013727077540389287 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 70432 19028 LYRLKFNEF True PC9_epitope_Rep1 1228.6604435632 1228.65880490379 77.981 3 0.12657036897811055 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 36562 18740 GVLDTLTKV True PC9_epitope_Rep4 944.55424715916 944.55314993586 80.167 2 0.12656198376331426 0.0013727077540389287 0.9438714419765777 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 92297 11249 RQLGLPTAL True NCI_RA007_Epitope_Rep4 967.5814649665099 967.58036993586 50.161 2 0.12655752864023334 0.0013727077540389287 0.9438714419765777 ['ENSG00000053372|ENST00000330263|MRTO4'] 32893 21084 GIMDRFLQV True PC9_epitope_Rep2 1077.5641006502099 1077.56300993586 86.557 2 0.12655690108896803 0.0013727077540389287 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 132352 16984 VYMDWYEK True PC9_epitope_Rep5 1132.4899326504399 1132.4888299358602 70.347 2 0.12655685160379337 0.0013727077540389287 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 113554 15011 TQWERPVSI True PC9_epitope_Rep5 1114.5771078620598 1114.5760099358602 62.743 2 0.12655243668785832 0.0013727077540389287 0.9438714419765777 ['ENST00000509475.5_1_4:40892379-41016395:-|nuORF', 'nc|ENSG00000163697|Q92870-2|APBB2', 'nc|ENSG00000163697|Q92870|APBB2', 'ENSG00000163697|ENST00000508593|APBB2'] 130269 8770 VTSTFIIEK True NCI_RA007_Epitope_Rep4 1036.5804619069997 1036.57936993586 40.536 2 0.12655240470197865 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 54091 21188 KYMDINFDF True PC9_epitope_Rep3 1191.52704643515 1191.5259499358601 86.788 2 0.1265519830684 0.0013727077540389287 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 43046 10707 IGGIGTVPVGR True PC9_epitope_Rep6 1024.6029286870798 1024.60182993586 51.995 2 0.12654711909371122 0.0013727077540389287 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 117220 17546 TYTVRTFAL True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 72.761 2 0.12654047876823382 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 22445 7166 ETGDEPFQYKN True NCI_RA007_Epitope_Rep4 1326.5728103272597 1326.57170993586 34.186 2 0.12653840150778134 0.0013727077540389287 0.9438714419765777 ['ENSG00000135821|ENST00000331872|GLUL', 'ENST00000324731.7_1_9:34917810-34918290:+|nuORF'] 103528 17462 SRDDNMFQI True PC9_epitope_Rep1 1124.49205790876 1124.4909699358602 71.965 2 0.12653633738504022 0.0013727077540389287 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 117170 15640 TYTDRVFFL True NCI_RA007_Epitope_Rep2 1160.5866099165999 1160.58550993586 65.549 2 0.1265257731173293 0.0013727077540389287 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 35434 8230 GTDTGVVQY True H1975_Epitope_Rep3 938.4345259493 938.43397496793 36.64 1 0.12652265648550726 0.0013727077540389287 0.9438714419765777 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF'] 18044 13720 EIIRQLNGV True PC9_epitope_Rep1 1040.59784330664 1040.59674993586 57.623 2 0.12651931292513877 0.0013727077540389287 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 71306 18764 MHDFNLISI True PC9_epitope_Rep6 1088.53246616876 1088.53136993586 84.816 2 0.12651748134316038 0.0013727077540389287 0.9438714419765777 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 14860 13378 DYFEQYGK True PC9_epitope_Rep1 1048.4501760134401 1048.44906993586 56.318 2 0.12651222627338318 0.0013727077540389287 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 117398 9671 VADGYPVRL True H1975_Epitope_Rep2 988.5341804209199 988.53308993586 42.18 2 0.126511926395578 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 31967 5334 GESPVPHTV True H1975_Epitope_Rep2 921.45559574705 921.45448993586 25.571 2 0.12651052586932257 0.0013727077540389287 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN'] 102833 21057 SQFQQEFPSL True PC9_epitope_Rep1 1209.5666027480097 1209.56550993586 85.826 2 0.12650683505192212 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 103908 12632 SRMDGEGQLTL True PC9_epitope_Rep4 1205.5710365054497 1205.56992993586 56.428 2 0.12650523950648565 0.0013727077540389287 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 64586 14429 LRDYTQINV True PC9_epitope_Rep5 1120.58767254576 1120.58656993586 60.5 2 0.12650036125327405 0.0013727077540389287 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF'] 106800 19823 SYGKINILL True PC9_epitope_Rep1 1019.60153170475 1019.60042993586 81.063 2 0.12649705209774775 0.0013727077540389287 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant'] 28804 16736 FTDESYLELY True H1975_Epitope_Rep3 1278.5655996885 1278.56450993586 69.901 2 0.12649684211049864 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 103557 9468 SRDDTTLNAL True PC9_epitope_Rep6 1104.54111627616 1104.54000993586 46.657 2 0.12649032780013056 0.0013727077540389287 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 77286 18982 NYISGIQTI True PC9_epitope_Rep4 1007.52876068731 1007.52766993586 81.106 2 0.12648884318915582 0.0013727077540389287 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 77206 11954 NYIDKVRFL True NCI_RA007_Epitope_Rep1 1166.64479349906 1166.64313490379 50.483 3 0.1264887023763228 0.0013727077540389287 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 75694 18595 NQTVVRVFL True PC9_epitope_Rep5 1074.61857875122 1074.61748993586 76.551 2 0.12648692979889894 0.0013727077540389287 0.9438714419765777 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 139360 9179 YTDTYTEAY True H1975_Epitope_Rep1 1125.4502355830898 1125.44967496793 40.214 1 0.1264861363634337 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 84842 12776 QHNDLEFKL True PC9_epitope_Rep4 1142.57202248162 1142.57038490379 57.006 3 0.12647284071357526 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 136486 15146 YHILGNEM True PC9_epitope_Rep1 975.44840219163 975.44730993586 63.081 2 0.12646502965048428 0.0013727077540389287 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 113162 20032 TQDAVPLTL True PC9_epitope_Rep5 956.51786165044 956.51676993586 82.105 2 0.12646430172998172 0.0013727077540389287 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 11950 6721 DHSQAVTL True PC9_epitope_Rep6 869.42429561877 869.42318993586 34.632 2 0.12646286626398148 0.0013727077540389287 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 56873 12061 LEDLPTVEA True H1975_Epitope_Rep1 985.49679185269 985.49624496793 51.403 1 0.1264618322376835 0.0013727077540389287 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 139386 14116 YTEALNIADY True H1975_Epitope_Rep2 1171.5397192938299 1171.5386299358602 59.452 2 0.1264513677403772 0.0013727077540389287 0.9438714419765777 ['ENSG00000122299|ENST00000355758|ZC3H7A', 'ENST00000575170.1_1_16:11869425-11876228:-|nuORF'] 108508 11665 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 49.941 1 0.12644862733978646 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 65317 15625 LSELEAALQR True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 64.921 2 0.12644860582409365 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 92280 18742 RQLEEEGITFV True PC9_epitope_Rep3 1319.6721304457096 1319.6710299358601 77.314 2 0.12644740773847785 0.0013727077540389287 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1'] 112971 20211 TPSIPVLTA True PC9_epitope_Rep5 897.51713337445 897.51658496793 82.788 1 0.12643547961188056 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 129162 5863 VTDDSPKYNY True H1975_Epitope_Rep3 1200.5298828861198 1200.52937496793 27.567 1 0.12643444337474616 0.0013727077540389287 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 86180 20624 QPSSLLPLA True PC9_epitope_Rep5 924.5280324113199 924.52748496793 84.381 1 0.12642878350830852 0.0013727077540389287 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 108215 9011 TEAEDMISA True H1975_Epitope_Rep1 965.4011772156899 965.4006249679301 39.565 1 0.12642616529414066 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B'] 35034 7581 GRDENSVEL True PC9_epitope_Rep1 1017.4727023631699 1017.47160993586 33.98 2 0.12642287536967273 0.0013727077540389287 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 58916 9077 LFVGGIKEDTE True NCI_RA007_Epitope_Rep3 1206.61321858726 1206.6121299358601 42.793 2 0.1264179488235871 0.0013727077540389287 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 114847 11844 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.49807496793 50.705 1 0.12640843479172212 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 127061 16971 VPYPPLLRA True PC9_epitope_Rep4 1024.6069514383598 1024.60584993586 73.269 2 0.12640243359864886 0.0013727077540389287 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 76481 10606 NTDFYQTSY True H1975_Epitope_Rep1 1137.46146897313 1137.4608749679298 45.75 1 0.1263951940612614 0.0013727077540389287 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 48578 7195 KEIDVDAVA True H1975_Epitope_Rep2 958.4971262058599 958.49602993586 32.61 2 0.12639083811221213 0.0013727077540389287 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 90199 15941 RHIEIFTDL True PC9_epitope_Rep4 1142.6084079903399 1142.6067749037902 69.243 3 0.12638777720796873 0.0013727077540389287 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 108668 8355 TELISTTA True H1975_Epitope_Rep2 834.43346332014 834.4329149679301 37.09 1 0.12638449700383156 0.0013727077540389287 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 130460 16385 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 70.985 2 0.12637890498934104 0.0013727077540389287 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 131521 20861 VVVGDLVEV True PC9_epitope_Rep5 927.5276980581499 927.52660993586 85.294 2 0.126377377624527 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 17248 20077 EHAPSIIFM True PC9_epitope_Rep1 1043.5110024481899 1043.5099099358602 82.054 2 0.12636130685145322 0.0013727077540389287 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 86629 5876 QREAEQSNVAL True PC9_epitope_Rep4 1243.61567819875 1243.61458993586 29.496 2 0.1263576259366902 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 74771 18733 NLLTHIENV True PC9_epitope_Rep5 1051.5662088251902 1051.5651099358602 77.071 2 0.126350200854452 0.0013727077540389287 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000477051.1_1_8:133854703-133858165:+|nuORF'] 74174 5907 NHYQKQLEI True PC9_epitope_Rep6 1171.5985715826298 1171.59691490379 30.99 3 0.126340072944879 0.0013727077540389287 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 102524 16117 SQADVIPAV True PC9_epitope_Rep4 898.4759968384599 898.47488993586 69.934 2 0.12633714878794958 0.0013727077540389287 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 70406 19723 LYQHEINLF True PC9_epitope_Rep3 1175.5975089534697 1175.59640993586 81.092 2 0.12632979514447443 0.0013727077540389287 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 93948 13982 RVLPPSALQSV True PC9_epitope_Rep4 1165.68190728377 1165.68080993586 61.688 2 0.12632620944115464 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000178999|Q96GD4-4|AURKB', 'ENSG00000178999|ENST00000585124|AURKB', 'nc|ENSG00000178999|Q96GD4-5|AURKB', 'nc|ENSG00000178999|Q96GD4-2|AURKB'] 7609 6332 ASITALEAK True NCI_RA007_Epitope_Rep5 902.50729696674 902.50618993586 31.032 2 0.1263255064421777 0.0013727077540389287 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 117003 10481 TYQDIQNTI True NCI_RA007_Epitope_Rep3 1094.52440358286 1094.52387496793 48.286 1 0.12632291521069342 0.0013727077540389287 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 113211 20641 TQDSSILPL True PC9_epitope_Rep1 972.5127762699999 972.51166993586 84.217 2 0.12631965459984557 0.0013727077540389287 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 75469 15660 NQIKEFIYA True PC9_epitope_Rep2 1124.5866099165999 1124.58550993586 65.512 2 0.12631742912245525 0.0013727077540389287 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 34776 20235 GQSELTLLL True PC9_epitope_Rep6 972.54916177872 972.54806993586 90.519 2 0.12631695059071021 0.0013727077540389287 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 131227 20752 VVPQQLLTV True PC9_epitope_Rep1 995.60153170475 995.60042993586 84.65 2 0.12631036514902014 0.0013727077540389287 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 120319 16784 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 69.707 2 0.12630060304887752 0.0013727077540389287 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 114289 7986 TSALPIIQK True NCI_RA007_Epitope_Rep3 969.58588164061 969.5853349679301 38.512 1 0.12629352566696997 0.0013727077540389287 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 100434 14325 SLPEELNRV True PC9_epitope_Rep3 1055.56112344475 1055.56002993586 60.187 2 0.12629241318853612 0.0013727077540389287 0.9438714419765777 ['ENSG00000137815|ENST00000389629|RTF1', 'NUSAP1-RTF1|1|fusion'] 9376 21681 AVVEFLTSV True PC9_epitope_Rep2 963.5276980581499 963.52660993586 88.872 2 0.12628885130751993 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA'] 107376 20555 SYSMIVNNL True PC9_epitope_Rep5 1039.50083168731 1039.4997299358602 84.109 2 0.12628729612144804 0.0013727077540389287 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 135812 13644 YEPPVQESV True PC9_epitope_Rep5 1046.49204082542 1046.49094993586 57.504 2 0.12628301513526408 0.0013727077540389287 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 44725 9317 IPQLNSKAV True PC9_epitope_Rep4 968.5654805492 968.56438993586 43.447 2 0.12627457016075674 0.0013727077540389287 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 70404 16758 LYQHAVEYF True PC9_epitope_Rep5 1168.5553097883196 1168.5542099358602 69.465 2 0.12627395692510002 0.0013727077540389287 0.9438714419765777 ['ENSG00000132612|ENST00000254950|VPS4A'] 38693 11353 HHSGNTYFL True PC9_epitope_Rep1 1074.48829285766 1074.4871899358602 48.547 2 0.12627221787136372 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 101875 8210 SPLFSQHTA True PC9_epitope_Rep2 986.48214484806 986.48104993586 36.938 2 0.12627138903040125 0.0013727077540389287 0.9438714419765777 ['ENSG00000167721|ENST00000301364|TSR1'] 17444 15594 EHGDQDYIW True PC9_epitope_Rep2 1161.47270236317 1161.4716099358602 65.258 2 0.12626138062825096 0.0013727077540389287 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 9665 21845 AYGNVFSAF True PC9_epitope_Rep3 974.4497820906199 974.44868993586 89.329 2 0.12625975450181504 0.0013727077540389287 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 48415 15502 KEDPFVFIP True H1975_Epitope_Rep2 1090.5698972233 1090.5688099358601 64.785 2 0.12625704354929274 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 91864 7585 RPNPPPVSV True PC9_epitope_Rep4 961.53451477409 961.53340993586 36.556 2 0.1262569268624808 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 97736 6490 SHGDVIRPL True PC9_epitope_Rep4 992.5403284305199 992.53922993586 32.082 2 0.12625623839536257 0.0013727077540389287 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 88840 4454 RDYVAPTA True NCI_RA007_Epitope_Rep3 891.4450310633499 891.44392993586 24.33 2 0.1262529253738951 0.0013727077540389287 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 97662 7515 SHDDGNIDL True PC9_epitope_Rep6 984.41485313388 984.41374993586 38.161 2 0.12624721471409858 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 25545 11165 FEQVSGVTV True H1975_Epitope_Rep2 964.4865615221598 964.48546993586 47.983 2 0.12624581526957632 0.0013727077540389287 0.9438714419765777 ['ENSG00000122591|ENST00000432176|HYCC1', 'nc|ENSG00000122591|Q9BYI3-2|HYCC1'] 21706 7499 ERYKEVAEL True PC9_epitope_Rep4 1135.5873381925899 1135.58569490379 36.207 3 0.12623558798948362 0.0013727077540389287 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 68 13001 AAAGSPVFL True H1975_Epitope_Rep3 831.44905381463 831.44850496793 55.243 1 0.12623272647602865 0.0013727077540389287 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 61553 15103 LLGINVTDFTR True H1975_Epitope_Rep3 1247.68738658703 1247.68628993586 63.492 2 0.12623020908066337 0.0013727077540389287 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 110187 15807 TIDPSNPMV True PC9_epitope_Rep5 972.45863252216 972.45752993586 65.791 2 0.12622715369789597 0.0013727077540389287 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 40236 10788 HRIEEVPEL True PC9_epitope_Rep4 1120.58767254576 1120.58656993586 49.254 2 0.1262224815511316 0.0013727077540389287 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 61298 7255 LLDVRDRDSY True H1975_Epitope_Rep2 1250.62551460646 1250.62387490379 32.84 3 0.12621776348005737 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 72836 13569 NALLSLAK True PC9_epitope_Rep1 828.50690304392 828.50580993586 57.049 2 0.1262156890365946 0.0013727077540389287 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 84971 9547 QIDPSIQRV True PC9_epitope_Rep4 1054.57710786206 1054.5760099358602 44.336 2 0.12620555704581482 0.0013727077540389287 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant'] 75915 15017 NRDTQELLL True PC9_epitope_Rep5 1100.58258716532 1100.5814899358602 62.765 2 0.12619877363312165 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'EGFR-TEAD2|1|fusion', 'EGFR-TEAD2|3|fusion', 'EGFR-TEAD2|2|fusion', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 8526 3793 ATVTPSPVK True NCI_RA007_Epitope_Rep3 898.5123823471799 898.51128993586 21.08 2 0.12618943349214248 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000069275|Q9H1E3-2|NUCKS1', 'ENSG00000069275|ENST00000367142|NUCKS1'] 39952 8522 HQQSIPAVL True NCI_RA007_Epitope_Rep3 991.5450794577898 991.5439899358599 40.592 2 0.12618929073253457 0.0013727077540389287 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 29879 16094 FVYENPISL True H1975_Epitope_Rep2 1080.54916177872 1080.5480699358602 67.114 2 0.12618611839635702 0.0013727077540389287 0.9438714419765777 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 9668 21874 AYGNVFSAF True PC9_epitope_Rep5 974.4497820906199 974.44923496793 89.176 1 0.12617920111181177 0.0013727077540389287 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 23835 16890 EYLLKVNEI True PC9_epitope_Rep6 1119.61757569171 1119.61646993586 77.484 2 0.12617257870891951 0.0013727077540389287 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 88206 14087 QYAPSTAQF True PC9_epitope_Rep2 1011.4661604307499 1011.46506993586 59.459 2 0.12617149458576324 0.0013727077540389287 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 78721 5631 PEEVSVTVK True NCI_RA007_Epitope_Rep4 986.5284263341399 986.5273299358599 28.261 2 0.12617019342819594 0.0013727077540389287 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 74088 9135 NHVASDISL True PC9_epitope_Rep6 954.47705946762 954.47596993586 45.244 2 0.12616896176859693 0.0013727077540389287 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 89660 9157 REVDPLRIPP True H1975_Epitope_Rep3 1190.6771562565 1190.6760499358602 40.212 2 0.12615176553348614 0.001392563709789723 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 21258 11069 ERIGETPEL True PC9_epitope_Rep4 1042.5294889632999 1042.52838993586 50.354 2 0.1261487870205961 0.001392563709789723 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 17606 18367 EHLTMLQVL True PC9_epitope_Rep6 1082.57941636118 1082.57830993586 83.293 2 0.12614812146395482 0.001392563709789723 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 21329 12088 ERLGAVDESL True PC9_epitope_Rep4 1087.55095268387 1087.54984993586 54.302 2 0.12614669218749877 0.001392563709789723 0.9438714419765777 ['ENSG00000197930|ENST00000395686|ERO1A'] 62171 14326 LLPHVVPGTT True PC9_epitope_Rep5 1032.59678067748 1032.59568993586 60.106 2 0.12613491929137657 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 48615 9768 KEIFQTTVP True H1975_Epitope_Rep2 1061.57571087973 1061.57460993586 42.559 2 0.12613341718652782 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 67822 22790 LTIEDGIFEV True PC9_epitope_Rep3 1134.58085582982 1134.5802749679299 92.932 1 0.12612802243256974 0.001392563709789723 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 52802 9018 KQTDVLQQL True NCI_RA007_Epitope_Rep3 1071.59242357303 1071.5913299358601 42.567 2 0.12612731648313366 0.001392563709789723 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 76339 12254 NSELSCQLY True H1975_Epitope_Rep1 1055.4593607981499 1055.45826993586 52.158 2 0.12612672081124612 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 3233 4676 AGFAGDDAPR True NCI_RA007_Epitope_Rep5 975.4410083120698 975.43990993586 24.669 2 0.12611862659579987 0.001392563709789723 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 4575 9221 ALAAGGYDVEK True PC9_epitope_Rep1 1092.54513902744 1092.5440499358601 40.32 2 0.12611399557098626 0.001392563709789723 0.9438714419765777 ['ENSG00000184357|ENST00000331442|H1-5'] 31781 4496 GELPRQPTT True NCI_RA007_Epitope_Rep5 997.5192586327701 997.51816993586 23.947 2 0.12611329860666365 0.001392563709789723 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5', 'HDAC5|p.L646Sfs*24|1|0.2|ENSG00000108840|chr17:44086686-44086686|G/-|frameshift_variant'] 43909 12049 ILDQKINEV True PC9_epitope_Rep5 1070.5971746003 1070.5960699358602 51.34 2 0.1260985576000142 0.001392563709789723 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 107187 22051 SYNVTSVLF True PC9_epitope_Rep1 1028.51786165044 1028.51676993586 89.633 2 0.1260874124621018 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant'] 140495 21253 YYIFIPSKF True PC9_epitope_Rep5 1176.6219327961599 1176.62137496793 86.8 1 0.12608635640304736 0.001392563709789723 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 7957 3142 ATDKSFVEK True NCI_RA007_Epitope_Rep4 1023.5236753068699 1023.5225699358599 17.569 2 0.1260772487248073 0.001392563709789723 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 94687 13075 RYLEKPMEI True PC9_epitope_Rep5 1177.6165301458898 1177.61488490379 55.299 3 0.12607334623776978 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 25444 15338 FELPQTPLA True H1975_Epitope_Rep3 1014.5385970950199 1014.53807496793 64.408 1 0.12607186105146304 0.001392563709789723 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 127957 11500 VRPPVQVY True PC9_epitope_Rep5 956.5443511817998 956.54324993586 49.231 2 0.1260680738882603 0.001392563709789723 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 89791 13678 RFEEAHFTF True PC9_epitope_Rep6 1182.5458077337796 1182.54470993586 64.398 2 0.1260660887834666 0.001392563709789723 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 23389 3984 EVVEEAENGR True NCI_RA007_Epitope_Rep4 1130.5203808315798 1130.5192899358601 21.571 2 0.1260659947941247 0.001392563709789723 0.9438714419765777 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 28988 18284 FTHSQFIVV True PC9_epitope_Rep1 1076.5654805492 1076.5643899358602 75.119 2 0.12606593580876452 0.001392563709789723 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 77461 15873 NYPETLGRLLI True NCI_RA007_Epitope_Rep2 1287.7186867153098 1287.7175899358601 66.459 2 0.12606485943894918 0.001392563709789723 0.9438714419765777 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 88843 4666 RDYVAPTA True NCI_RA007_Epitope_Rep5 891.4450310633499 891.44392993586 24.632 2 0.12606201558675426 0.001392563709789723 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 135508 13937 YEDSGIPLP True H1975_Epitope_Rep2 989.4705771048499 989.47002496793 58.757 1 0.12605316332105743 0.001392563709789723 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 125630 14451 VMEQITLAY True H1975_Epitope_Rep2 1066.53688284286 1066.53578993586 60.741 2 0.12605167426919464 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000143570|Q9NY26-2|SLC39A1', 'ENSG00000143570|ENST00000356205|SLC39A1'] 56793 6567 LEATSAVSA True H1975_Epitope_Rep2 847.4287122928699 847.42816496793 30.17 1 0.1260478055401976 0.001392563709789723 0.9438714419765777 ['ENSG00000205208|ENST00000379205|C4orf46', 'ENST00000508836.1_1_4:159590767-159593157:-|nuORF'] 86526 10802 QRALPSEEL True PC9_epitope_Rep1 1041.54547338061 1041.54436993586 46.437 2 0.1260449974877375 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF', 'EIF4G1|p.G1434C|1|0.25|ENSG00000114867|chr3:184331511-184331511|G/T|missense_variant'] 43436 11286 IHSPVVNEL True PC9_epitope_Rep6 1006.54474510462 1006.54364993586 54.426 2 0.1260438173119172 0.001392563709789723 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 41077 19111 HYLDTTTLI True PC9_epitope_Rep3 1075.55497543515 1075.5538699358601 78.734 2 0.12602589943166906 0.001392563709789723 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 46740 20158 IVAPGTFEV True PC9_epitope_Rep1 931.5014833103099 931.50038993586 82.367 2 0.1260132029337894 0.001392563709789723 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 83763 15360 QEEDFVLQV True H1975_Epitope_Rep1 1105.5291546101298 1105.52857496793 64.352 1 0.12600900452158717 0.001392563709789723 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 132759 17772 VYSPHVLNL True PC9_epitope_Rep1 1040.5654805492 1040.5643899358602 73.156 2 0.12600793273839467 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 96518 6837 SELITKAVA True H1975_Epitope_Rep2 930.5385970950199 930.53750993586 31.215 2 0.12600465152261695 0.001392563709789723 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-2|p.P39S|2|0.36|ENSG00000187837|chr6:26056314-26056314|G/A|missense_variant', 'ENSG00000184357|ENST00000331442|H1-5'] 126298 9803 VPIESIERA True PC9_epitope_Rep4 1012.5553097883198 1012.55420993586 45.348 2 0.12600421448136515 0.001392563709789723 0.9438714419765777 ['ENSG00000167136|ENST00000372642|ENDOG'] 44676 15567 IPLYLKGGVA True PC9_epitope_Rep2 1029.6222671493297 1029.62116993586 65.152 2 0.12599743914136352 0.001392563709789723 0.9438714419765777 ['ENSG00000112695|ENST00000684430|COX7A2'] 132706 20409 VYSEVAAYEF True PC9_epitope_Rep2 1176.5339056373998 1176.5333749679298 83.929 1 0.12599311680780606 0.001392563709789723 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 21331 15158 ERLGQFM[Oxidation]TL True PC9_epitope_Rep2 1109.55393026977 1109.55282993586 63.563 2 0.1259926388011483 0.001392563709789723 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 97707 11051 SHEEAITAL True PC9_epitope_Rep3 969.4767251144499 969.47562993586 47.503 2 0.12599173258829524 0.001392563709789723 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 92643 19729 RRFMQTFVL True PC9_epitope_Rep1 1196.64883333368 1196.64718490379 80.715 3 0.1259913730236415 0.001392563709789723 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 140579 19037 YYLTDVDRI True PC9_epitope_Rep1 1156.5764391557198 1156.57534993586 78.016 2 0.1259829854404419 0.001392563709789723 0.9438714419765777 ['ENSG00000088256|ENST00000078429|GNA11'] 98021 17818 SHSVFSVTI True PC9_epitope_Rep2 975.50254593947 975.50144993586 73.831 2 0.125982975763193 0.001392563709789723 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 25604 10904 FETEFNTQP True H1975_Epitope_Rep2 1111.48220441771 1111.4816749679298 46.972 1 0.1259820742829169 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 107161 18112 SYNGKLYVF True PC9_epitope_Rep1 1089.54949613189 1089.54838993586 74.46 2 0.1259727122352782 0.001392563709789723 0.9438714419765777 ['ENSG00000174010|ENST00000328046|KLHL15'] 28906 12333 FTEEGLDLHY True H1975_Epitope_Rep2 1222.5506183306998 1222.5495299358602 52.523 2 0.12596868741005085 0.001392563709789723 0.9438714419765777 ['ENSG00000116198|ENST00000378230|CEP104'] 118912 3659 VEEPSRPSA True H1975_Epitope_Rep3 970.4719740871799 970.47086993586 19.118 2 0.12596556498023184 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'chr12:2868754-2872102|108|24.14|0.02|10.23|-|0|FOXM1,None|1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 137837 7599 YPGEITSD True H1975_Epitope_Rep3 880.38142774728 880.38087496793 34.21 1 0.12595713631122463 0.001392563709789723 0.9438714419765777 ['ENSG00000151952|ENST00000422113|TMEM132D'] 96929 4554 SETVMVHQA True NCI_RA007_Epitope_Rep4 1000.4647805317599 1000.46368993586 23.92 2 0.1259544382241304 0.001392563709789723 0.9438714419765777 ['ENSG00000100647|ENST00000342745|SUSD6'] 6626 16470 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 75.771 2 0.12595443596315087 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 127959 11707 VRPPVQVY True PC9_epitope_Rep5 956.5443511817998 956.54324993586 50.029 2 0.12595236484617472 0.001392563709789723 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 86777 17381 QRMTTQLLL True PC9_epitope_Rep1 1102.6168644990598 1102.61576993586 71.661 2 0.1259491955878922 0.001392563709789723 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 106255 6455 SVQEYFVRK True NCI_RA007_Epitope_Rep3 1154.6084079903396 1154.6067749037902 32.417 3 0.12594700377920656 0.001392563709789723 0.9438714419765777 ['ENSG00000163781|ENST00000260810|TOPBP1'] 132588 12044 VYPPPHQVF True PC9_epitope_Rep2 1082.5549158654999 1082.55380993586 51.644 2 0.125936317894558 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 136811 17200 YITERIIAV True PC9_epitope_Rep2 1076.62299542532 1076.62188993586 71.418 2 0.12593573893555887 0.001392563709789723 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 41444 20659 IAVNAVLTV True PC9_epitope_Rep5 898.5487678559 898.54766993586 84.518 2 0.12593078409101394 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 110104 6712 TIAPALVSK True NCI_RA007_Epitope_Rep5 898.5487678559 898.54766993586 32.491 2 0.12592952635469734 0.001392563709789723 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 94906 15848 RYPDRITLI True PC9_epitope_Rep1 1145.65569253593 1145.65405490379 65.772 3 0.12592522177131008 0.001392563709789723 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 123182 6603 VHIEIGPDGR True NCI_RA007_Epitope_Rep4 1091.5723568347898 1091.5712499358601 32.025 2 0.12591200346565634 0.001392563709789723 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF', 'ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF'] 103138 20817 SQMPTVIYV True PC9_epitope_Rep1 1036.5263181591597 1036.52577496793 84.9 1 0.1259076725873292 0.001392563709789723 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 131820 21822 VYAPPVGGFSF True PC9_epitope_Rep2 1139.56514619603 1139.56457496793 89.412 1 0.12589733982262163 0.001392563709789723 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 84757 16997 QHIDFVTAI True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 77.929 2 0.1258885165340431 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44', 'nc|ENSG00000131725|Q5JSH3-3|WDR44'] 106092 6158 SVMRPEQIMK True NCI_RA007_Epitope_Rep5 1217.6260492837698 1217.62441490379 30.365 3 0.12588146934025393 0.001392563709789723 0.9438714419765777 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 75565 17979 NQMDGFDTL True PC9_epitope_Rep6 1039.4280606698699 1039.4269699358601 81.784 2 0.12588132619550665 0.001392563709789723 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 7168 9527 ARDDTLITA True PC9_epitope_Rep1 974.50327421546 974.50216993586 41.503 2 0.12587932499184284 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 48850 6494 KESEMNVIA True H1975_Epitope_Rep3 1019.4957463068698 1019.49464993586 29.949 2 0.12587694930222107 0.001392563709789723 0.9438714419765777 ['ENSG00000148411|ENST00000277554|NACC2'] 126843 13892 VPTANVSVVDL True H1975_Epitope_Rep3 1112.607739284 1112.60664993586 58.745 2 0.1258713470708843 0.001392563709789723 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 114302 8165 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.5853349679301 38.09 1 0.1258673381891674 0.001392563709789723 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 113645 6452 TRDEDHIAL True PC9_epitope_Rep2 1068.51998690876 1068.5188899358602 30.233 2 0.12586714240125293 0.001392563709789723 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 45086 6364 IQRTPKIQVYS True H1975_Epitope_Rep1 1331.75613485319 1331.7544949037901 29.54 3 0.12586252760870942 0.001392563709789723 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 67806 22679 LTIDDGIFEV True PC9_epitope_Rep2 1120.56520576568 1120.56467496793 92.729 1 0.12585859847041958 0.001392563709789723 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 4138 16812 AHTTVIIDL True PC9_epitope_Rep2 981.5494961318899 981.54838993586 69.916 2 0.12585749333523846 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000138085|Q6UW56-2|ATRAID', 'ENSG00000138085|ENST00000380171|ATRAID', 'nc|ENSG00000138085|Q6UW56-3|ATRAID'] 56893 9319 LEDPFNPKA True H1975_Epitope_Rep1 1029.51311062317 1029.51200993586 40.753 2 0.1258388247353405 0.001392563709789723 0.9438714419765777 ['ENSG00000182810|ENST00000332395|DDX28'] 72634 10468 MVVQDGIVKA True PC9_epitope_Rep6 1058.57941636118 1058.57830993586 51.022 2 0.12583606589961704 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 46512 9861 ITPQTIHGV True PC9_epitope_Rep5 964.5341804209198 964.53308993586 42.9 2 0.12583520208269156 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 74033 12565 NHSDYNMVL True PC9_epitope_Rep4 1091.47059418819 1091.46948993586 56.155 2 0.12583238078778425 0.001392563709789723 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 105638 10801 SVFGTMPLK True NCI_RA007_Epitope_Rep5 978.5208388558999 978.51974993586 48.18 2 0.12582858726429572 0.001392563709789723 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 45381 8366 ISDPGVQGY True H1975_Epitope_Rep1 934.43961132974 934.4390649679301 37.108 1 0.12582088483542395 0.001392563709789723 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 3501 14947 AGLQFPVGR True PC9_epitope_Rep3 943.5239500903898 943.52284993586 62.625 2 0.12582011486306785 0.001392563709789723 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 52054 19990 KLILLITQV True PC9_epitope_Rep4 1039.7005174700298 1039.69942993586 85.025 2 0.12581225116123954 0.001392563709789723 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 96737 5002 SEQHIPVSA True NCI_RA007_Epitope_Rep3 966.4770594676199 966.47596993586 26.672 2 0.1258101965720314 0.001392563709789723 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 26777 9707 FLDQNLQKY True H1975_Epitope_Rep3 1167.59242357303 1167.5913299358601 42.358 2 0.12579729515263702 0.001392563709789723 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 86153 9089 QPSEVLRTV True PC9_epitope_Rep4 1027.56620882519 1027.5651099358602 42.547 2 0.12578540714030342 0.001392563709789723 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 21785 8693 ESDGKSRWFY True H1975_Epitope_Rep2 1273.5727507576098 1273.57111490379 38.399 3 0.12576798604898068 0.001392563709789723 0.9438714419765777 ['ENSG00000146476|ENST00000367294|ARMT1'] 7847 6764 ATAIGMPVEK True NCI_RA007_Epitope_Rep3 1015.5372171960299 1015.5361099358599 33.7 2 0.12576239222997074 0.001392563709789723 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000509676.1_1_4:2934766-2935650:-|nuORF'] 70785 9389 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42717496793 41.026 1 0.1257612287589017 0.001392563709789723 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 76199 10251 NRVGDTITV True PC9_epitope_Rep3 973.5192586327701 973.51816993586 44.381 2 0.12576119047308718 0.001392563709789723 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 104320 11031 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep1 1170.4539414449798 1170.45337496793 47.393 1 0.12575464798147376 0.001392563709789723 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 63134 4917 LNQIDSVK True NCI_RA007_Epitope_Rep1 915.50254593947 915.50144993586 23.207 2 0.12575023944514763 0.001392563709789723 0.9438714419765777 ['CON__P12763'] 87908 10059 QVNDAFTHV True PC9_epitope_Rep4 1029.4879585044898 1029.48686993586 46.36 2 0.12575023154177595 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 56201 15592 LDPHLVLDQL True H1975_Epitope_Rep1 1161.6393737654498 1161.63826993586 65.258 2 0.1257492501847576 0.001392563709789723 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 39847 11083 HQGPATTVAF True PC9_epitope_Rep3 1027.50869394907 1027.50758993586 47.629 2 0.12574639038342714 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 22916 15103 EVFSSFAHA True PC9_epitope_Rep1 993.4555957470499 993.45448993586 62.912 2 0.12574162429665262 0.001392563709789723 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 139388 7656 YTEDSPGLKV True H1975_Epitope_Rep2 1107.54480467427 1107.54370993586 34.402 2 0.12573686585420304 0.001392563709789723 0.9438714419765777 ['ENSG00000106803|ENST00000223641|SEC61B'] 39532 17972 HPFGFVAV True PC9_epitope_Rep2 872.4544735482399 872.45336993586 74.432 2 0.12573367625898205 0.001392563709789723 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 8237 14667 ATIIDILTK True NCI_RA007_Epitope_Rep4 986.60119735158 986.60010993586 63.825 2 0.12572147634654618 0.001392563709789723 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 72283 8091 MSDVNLKY True H1975_Epitope_Rep2 968.4637179025999 968.46262993586 36.069 2 0.1257092644205176 0.001392563709789723 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1-LYPLA1|1|fusion', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 34802 10465 GQTITISRV True PC9_epitope_Rep1 973.5556441414899 973.55454993586 45.143 2 0.12570570589994642 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000145216|Q6UN15-3|FIP1L1', 'nc|ENSG00000145216|Q6UN15-5|FIP1L1', 'ENST00000513008.5_1_4:54292015-54325613:+|nuORF', 'nc|ENSG00000145216|Q6UN15-4|FIP1L1', 'ENSG00000145216|ENST00000337488|FIP1L1', 'ENST00000513975.5_1_4:54244032-54306933:+|nuORF', 'ENST00000505125.5_1_4:54245288-54325613:+|nuORF'] 38006 7226 HEIEGTGLP True H1975_Epitope_Rep1 951.4661604307499 951.46506993586 32.805 2 0.1256957356238083 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'NIBAN2|p.M44I|1|0.79|ENSG00000136830|chr9:127531702-127531702|C/T|missense_variant'] 46924 21487 IVLDRLIEL True PC9_epitope_Rep5 1082.66994561774 1082.6688499358602 87.684 2 0.12569470463191468 0.001392563709789723 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 135509 14036 YEDSGIPLP True H1975_Epitope_Rep2 989.4705771048499 989.47002496793 59.141 1 0.12569087742033022 0.001392563709789723 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 25387 20165 FEILPGLSV True H1975_Epitope_Rep1 973.54843350273 973.54732993586 83.913 2 0.12567942266241455 0.001392563709789723 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 104411 12566 SSIDGLHQI True PC9_epitope_Rep3 968.49270953176 968.49160993586 53.357 2 0.1256776656687274 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 68721 16701 LVDEWLDSY True H1975_Epitope_Rep1 1138.51825557326 1138.51714993586 69.636 2 0.1256775327487706 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 126045 13154 VPAPSPLSA True PC9_epitope_Rep5 837.45961849833 837.4590749679301 55.601 1 0.12567722405691242 0.001392563709789723 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 138345 17168 YRAQQIIQL True PC9_epitope_Rep5 1131.64004247179 1131.6389499358602 71.057 2 0.12566387351840808 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000139192|Q9BX59-3|TAPBPL', 'ENSG00000139192|ENST00000266556|TAPBPL', 'nc|ENSG00000139192|Q9BX59-2|TAPBPL', 'nc|ENSG00000139192|Q9BX59-7|TAPBPL', 'ENST00000539384.5_1_12:6560901-6571312:+|nuORF'] 43292 7754 IHDSQAPSL True PC9_epitope_Rep1 966.47705946762 966.47596993586 34.647 2 0.1256626324927773 0.001392563709789723 0.9438714419765777 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF'] 23743 20777 EYIQFVPLL True NCI_RA007_Epitope_Rep5 1120.6168474157198 1120.61574993586 86.892 2 0.12565724503242404 0.001392563709789723 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 132563 20571 VYPLMKEYF True PC9_epitope_Rep1 1188.5889184157197 1188.58782993586 83.941 2 0.12565543280098052 0.001392563709789723 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 47242 10843 IYEALELR True NCI_RA007_Epitope_Rep1 1005.5494961318899 1005.54838993586 46.171 2 0.1256545194906368 0.001392563709789723 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 135390 8044 YDM[Oxidation]LESIR True NCI_RA007_Epitope_Rep1 1041.4800966231699 1041.47898993586 35.286 2 0.12565346079438913 0.001392563709789723 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 100002 20940 SLITRLLEV True PC9_epitope_Rep4 1042.63864548946 1042.63754993586 88.705 2 0.12565315156200335 0.001392563709789723 0.9438714419765777 ['ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 119507 11737 VEQNFPAIA True H1975_Epitope_Rep2 987.5025459394698 987.50144993586 50.22 2 0.1256530018099326 0.001392563709789723 0.9438714419765777 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'DDX39A|p.M320Wfs*66|1|0.23|ENSG00000123136|chr19:14409552-14409552|T/-|frameshift_variant', 'ENST00000587730.5_1_19:14520346-14520718:-|nuORF', 'ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF', 'ENST00000474961.5_1_6:31498213-31499248:-|nuORF', 'ENST00000462256.5_1_6:31498213-31500844:-|nuORF'] 125958 10345 VPAGGAVAV True PC9_epitope_Rep1 739.42283906679 739.42229496793 44.673 1 0.1256458852718813 0.001392563709789723 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 31889 5482 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 26.139 1 0.12563640466429898 0.001392563709789723 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 72622 8253 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep4 1074.57433136118 1074.5732299358601 39.207 2 0.12563053165953422 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 17852 12669 EIAQEFKTDLR True PC9_epitope_Rep3 1348.6986795467199 1348.6970249037902 53.757 3 0.12562644347086277 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 11975 19231 DHTVGFIL True PC9_epitope_Rep4 900.4705175351999 900.46942993586 82.072 2 0.12562416514691413 0.001392563709789723 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 98028 15839 SHTDVVPVF True PC9_epitope_Rep2 999.50254593947 999.50144993586 66.183 2 0.12562285183793467 0.001392563709789723 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 73809 10277 NHDTGEYVL True PC9_epitope_Rep2 1046.46688870674 1046.46637496793 44.862 1 0.12562056362112922 0.001392563709789723 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 139898 5234 YVEGVHQQY True H1975_Epitope_Rep2 1121.51417325233 1121.5130699358601 25.2 2 0.12561373937741616 0.001392563709789723 0.9438714419765777 ['ENSG00000062716|ENST00000262291|VMP1', 'VMP1|p.Q104P|1|0.42|ENSG00000062716|chr17:59738844-59738844|A/C|missense_variant'] 16285 5560 EEILAQAK True NCI_RA007_Epitope_Rep1 900.4916469026 900.49054993586 25.696 2 0.12561248561335167 0.001392563709789723 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 139009 16224 YSGLLLPDAQY True H1975_Epitope_Rep2 1238.6183039676998 1238.61720993586 67.616 2 0.12560068968954274 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 91791 10899 RPLLKAITA True PC9_epitope_Rep1 981.63350053937 981.63240993586 46.807 2 0.12559357577138183 0.001392563709789723 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 66595 6143 LSSPATLNSR True PC9_epitope_Rep4 1044.5563724174801 1044.55526993586 30.648 2 0.12558873990966415 0.001392563709789723 0.9438714419765777 ['CON__P00761'] 47005 16238 IVQDTLTAV True PC9_epitope_Rep3 958.53351171458 958.53240993586 67.597 2 0.12558824517215542 0.001392563709789723 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 29467 22964 FVIDGFDEL True PC9_epitope_Rep1 1053.50187723313 1053.50137496793 93.131 1 0.12558452998800404 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 138053 20979 YQDPVTLQL True PC9_epitope_Rep1 1075.55497543515 1075.55447496793 85.521 1 0.12558374157667926 0.001392563709789723 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 37568 12505 GYSEHFVEF True NCI_RA007_Epitope_Rep1 1113.47672511445 1113.47562993586 52.622 2 0.1255829938937159 0.001392563709789723 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 31429 13415 GEDPITFAP True H1975_Epitope_Rep2 945.4443623570099 945.44326993586 56.736 2 0.12558213624426798 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12', 'ENST00000481154.1_1_7:77214868-77221624:+|nuORF', 'ENST00000494248.1_1_7:77214868-77230160:+|nuORF'] 101727 20123 SPGTALILLEA True PC9_epitope_Rep6 1083.61757569171 1083.61646993586 90.077 2 0.12557933582332484 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 30113 20631 FYPPKVELF True PC9_epitope_Rep5 1138.60628273202 1138.6051899358602 84.409 2 0.12557335105518702 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 98852 23779 SIVDFLITA True PC9_epitope_Rep1 977.5433481222899 977.54224993586 96.261 2 0.12557092433932587 0.001392563709789723 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 9626 11069 AYGFVARI True NCI_RA007_Epitope_Rep5 895.4915873329498 895.49048993586 49.211 2 0.1255708145933018 0.001392563709789723 0.9438714419765777 ['ENSG00000110799|ENST00000261405|VWF', 'ENST00000321023.5_1_12:6204574-6232125:-|nuORF', 'nc|ENSG00000110799|P04275-2|VWF'] 67332 20980 LTDQTLIYL True PC9_epitope_Rep4 1078.5910265906998 1078.58992993586 88.861 2 0.12556066649871922 0.001392563709789723 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 17263 17596 EHASSLLEL True PC9_epitope_Rep5 997.5080252427299 997.50692993586 72.691 2 0.12554878443894413 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 113594 9092 TRAGPGTLSV True PC9_epitope_Rep5 957.52434401321 957.52324993586 39.918 2 0.12554624859399707 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF'] 98598 10356 SINPDEAVAY True H1975_Epitope_Rep1 1077.4978544818498 1077.49727496793 44.782 1 0.1255426469252776 0.001392563709789723 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 126380 21859 VPLEFPVVA True PC9_epitope_Rep3 969.5535188831699 969.55242993586 89.383 2 0.12554218722958196 0.001392563709789723 0.9438714419765777 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 13190 17677 DLTDYLM[Oxidation]K True PC9_epitope_Rep5 1013.47394861357 1013.47284993586 73.009 2 0.1255380650502192 0.001392563709789723 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 24566 20892 FALPGLLHA True PC9_epitope_Rep5 937.5385375253701 937.53744993586 85.415 2 0.1255351203096704 0.001392563709789723 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 74516 20135 NKTDVILIL True PC9_epitope_Rep5 1027.62774645259 1027.62664993586 82.497 2 0.12553473206389237 0.001392563709789723 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'ENST00000472344.1_1_9:90113992-90254278:+|nuORF'] 127483 6319 VQTEVNREL True PC9_epitope_Rep6 1086.56693710118 1086.5658499358601 32.853 2 0.12552987357203316 0.001392563709789723 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 73990 12651 NHQGATPLVL True PC9_epitope_Rep5 1048.56654317836 1048.5654499358602 53.665 2 0.12552750541300173 0.001392563709789723 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 135644 5671 YEEVHDLER True NCI_RA007_Epitope_Rep1 1188.54111627616 1188.53947490379 26.117 3 0.12552647876357406 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF', 'nc|ENSG00000205531|Q99733-2|NAP1L4', 'ENSG00000205531|ENST00000380542|NAP1L4'] 21914 11371 ESGDLLVSY True H1975_Epitope_Rep2 981.46549172441 981.46494496793 48.788 1 0.12552476196975235 0.001392563709789723 0.9438714419765777 ['PCDHGB2|p.D88Y|1|0.09|ENSG00000253910|chr5:141360397-141360397|G/T|missense_variant'] 97054 6786 SEYIHAQVA True NCI_RA007_Epitope_Rep2 1016.4927095317598 1016.49160993586 31.012 2 0.12552386186981415 0.001392563709789723 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 73162 9020 NEDLRSWTA True H1975_Epitope_Rep3 1090.50433684462 1090.50377496793 39.69 1 0.12551920823563956 0.001392563709789723 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 42028 7971 IEDVPAPST True H1975_Epitope_Rep3 927.45492704071 927.45382993586 35.632 2 0.1255025740270337 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF', 'NASP|p.T209Dfs*3|1|0.09|ENSG00000132780|chr1:45607535-45607536|-/G|frameshift_variant'] 122816 6666 VGVNGFGR True NCI_RA007_Epitope_Rep2 804.4242360491198 804.42312993586 30.54 2 0.1255015218325396 0.001392563709789723 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 45129 8662 IQVSQSQNV True PC9_epitope_Rep5 1001.51417325233 1001.51306993586 38.263 2 0.12549443367086138 0.001392563709789723 0.9438714419765777 ['ENST00000587366.1_1_18:55280911-55288994:-|nuORF'] 26261 10211 FIASKGVKLV True PC9_epitope_Rep4 1060.66446631448 1060.6633699358601 46.954 2 0.12548995520178888 0.001392563709789723 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 39483 18053 HPAAFPLPVV True PC9_epitope_Rep6 1046.59130137422 1046.59020993586 82.071 2 0.12548893647772688 0.001392563709789723 0.9438714419765777 ['ENSG00000108523|ENST00000262482|RNF167'] 86779 16228 QRMTTQLLL True PC9_epitope_Rep2 1102.6168644990598 1102.61576993586 67.666 2 0.12548633451478505 0.001392563709789723 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 87164 20609 QSLAGGIIGV True PC9_epitope_Rep1 913.5232813840499 913.5227349679301 84.089 1 0.12548258057912579 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 99368 10969 SLDVGGPLRY True H1975_Epitope_Rep3 1075.56620882519 1075.5651099358602 47.283 2 0.12547658728822 0.001392563709789723 0.9438714419765777 ['ENSG00000176894|ENST00000317479|PXMP2'] 35036 6642 GRDENSVEL True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 30.957 2 0.125470804996254 0.001392563709789723 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 84730 14060 QHGGFVVTV True PC9_epitope_Rep1 942.4923156089399 942.49120993586 58.921 2 0.1254629523263887 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 66589 6466 LSSPATLNSR True PC9_epitope_Rep2 1044.5563724174801 1044.55526993586 30.284 2 0.12546223124663144 0.001392563709789723 0.9438714419765777 ['CON__P00761'] 76858 20393 NVIDYIDTI True PC9_epitope_Rep6 1064.53899101784 1064.5378899358602 91.14 2 0.1254553917816889 0.001392563709789723 0.9438714419765777 ['ENSG00000156017|ENST00000376834|CARNMT1'] 105598 8396 SVEGQLEFR True H1975_Epitope_Rep1 1063.52982331647 1063.5287299358602 37.223 2 0.1254544681134568 0.001392563709789723 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 8372 5968 ATNGPPVLVK True NCI_RA007_Epitope_Rep3 994.58113061334 994.58002993586 30.456 2 0.12544523139427965 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 96309 7885 SEETPLTAA True H1975_Epitope_Rep3 917.4341915961298 917.43364496793 35.305 1 0.12543650423993452 0.001392563709789723 0.9438714419765777 ['ENSG00000182154|ENST00000371443|MRPL41'] 107037 22787 SYLPFTEAF True PC9_epitope_Rep3 1073.5069626135698 1073.50637496793 92.921 1 0.12543617172899713 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 123100 11411 VHAQIVSTL True PC9_epitope_Rep2 966.5498304850599 966.54872993586 49.214 2 0.1254350772007298 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 29461 6877 FVIATSTK True NCI_RA007_Epitope_Rep1 865.49091862661 865.48982993586 30.755 2 0.12542844747555792 0.001392563709789723 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 49121 3046 KGELTGEVR True NCI_RA007_Epitope_Rep2 987.5349086969098 987.53380993586 16.439 2 0.1254243589003448 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 57128 11180 LEEPLTQVA True H1975_Epitope_Rep3 998.52842633414 998.5278749679301 48.101 1 0.1254227962622856 0.001392563709789723 0.9438714419765777 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'ENST00000368302.3_1_1:156027838-156028159:+|nuORF', 'nc|ENSG00000116586|Q9Y2Q5-3|LAMTOR2'] 89629 9326 RETETVFVP True NCI_RA007_Epitope_Rep4 1076.5502244078798 1076.54912993586 42.729 2 0.12541993585788866 0.001392563709789723 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 90536 9200 RKFDEVVSL True NCI_RA007_Epitope_Rep4 1091.59750895347 1091.59640993586 42.233 2 0.1254129671848266 0.001392563709789723 0.9438714419765777 ['ENSG00000197563|ENST00000640252|PIGN'] 3990 20471 AHFPINVVI True PC9_epitope_Rep3 1008.5756513100799 1008.57454993586 84.0 2 0.12540941737660175 0.001392563709789723 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 11679 19712 DHDRFWVL True PC9_epitope_Rep2 1086.52467836638 1086.5235899358602 81.21 2 0.12540757905822703 0.001392563709789723 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 132516 20874 VYPEYVIQY True PC9_epitope_Rep1 1172.57537652656 1172.57426993586 85.117 2 0.12539396226472443 0.001392563709789723 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 42591 7388 IESRTLAIA True NCI_RA007_Epitope_Rep5 972.5603951687599 972.55928993586 35.095 2 0.12538799470191872 0.001392563709789723 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 70377 18985 LYQDQILEKF True PC9_epitope_Rep4 1295.6761531969898 1295.6750499358602 81.118 2 0.1253859012396625 0.001392563709789723 0.9438714419765777 ['ENSG00000074935|ENST00000368662|TUBE1', 'ENST00000368657.7_1_6:112400794-112408637:-|nuORF'] 41015 18490 HYGLPVVV True PC9_epitope_Rep3 882.49633836022 882.49578496793 76.336 1 0.12538197104449667 0.001392563709789723 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 96240 8778 SEEPGAPLP True H1975_Epitope_Rep1 895.4287122928699 895.42816496793 38.695 1 0.1253762693387181 0.001392563709789723 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 92174 14795 RQFDVDILI True NCI_RA007_Epitope_Rep3 1117.6131590176099 1117.61206993586 65.619 2 0.12536894251274325 0.001392563709789723 0.9438714419765777 ['ENST00000548259.1_1_12:110930799-110939856:-|nuORF', 'ENSG00000111237|ENST00000549578|VPS29', 'nc|ENSG00000111237|Q9UBQ0-2|VPS29'] 108252 2772 TEAPLNPKA True H1975_Epitope_Rep2 939.5025459394699 939.50144993586 14.692 2 0.12536714401396312 0.001392563709789723 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 89664 4989 REVDPPM[Oxidation]GP True H1975_Epitope_Rep1 1012.4647809121999 1012.46368993586 24.264 2 0.12536299831619796 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 28380 12928 FSDPVYAEAY True H1975_Epitope_Rep2 1160.5026055091198 1160.50207496793 54.841 1 0.12535816899804353 0.001392563709789723 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 47183 17790 IYADLNQNDF True PC9_epitope_Rep6 1211.5458673034302 1211.5447699358601 81.064 2 0.12535522820141243 0.001392563709789723 0.9438714419765777 ['ENSG00000064763|ENST00000536681|FAR2'] 74050 16167 NHSIFSPSL True PC9_epitope_Rep2 1000.4977949122001 1000.49668993586 67.44 2 0.12535345010471935 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-8|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM', 'MECOM|p.A481Cfs*2|2|0.27|ENSG00000085276|chr3:169115867-169115868|-/A|frameshift_variant'] 107950 21281 TAYDNFVEL True PC9_epitope_Rep5 1070.49204082542 1070.49094993586 86.91 2 0.12534856845910153 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 75924 6898 NRDVPNETL True PC9_epitope_Rep4 1056.51998690876 1056.5188899358602 33.757 2 0.12533928865471572 0.001392563709789723 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 46937 22297 IVLPEDLQL True PC9_epitope_Rep1 1038.5961119711399 1038.59557496793 90.577 1 0.12533804646227342 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 28319 11150 FRYTAGTPY True PC9_epitope_Rep4 1074.5134449763398 1074.5123499358601 50.668 2 0.12533524700828616 0.001392563709789723 0.9438714419765777 ['ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 96711 6573 SEQDPAEHIP True H1975_Epitope_Rep2 1121.4989171110099 1121.4978299358602 30.195 2 0.1253321016175647 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 89022 7434 REEEEDFIRAA True H1975_Epitope_Rep2 1363.6368075661499 1363.6357099358602 33.54 2 0.1253292365217606 0.001392563709789723 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4'] 102927 14977 SQIHDIVLV True PC9_epitope_Rep6 1022.5760452328999 1022.57494993586 69.619 2 0.12531805677563101 0.001392563709789723 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 25584 6928 FESSGIHVA True H1975_Epitope_Rep3 945.45559574705 945.45448993586 31.609 2 0.12531349186219365 0.001392563709789723 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 34723 7781 GQNPTEAEL True NCI_RA007_Epitope_Rep2 957.44033960573 957.4397949679301 34.895 1 0.12531260195127328 0.001392563709789723 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 53650 15880 KWNPTAGVAF True PC9_epitope_Rep6 1089.56072952193 1089.5596299358601 73.361 2 0.1253125801717531 0.001392563709789723 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 75447 8571 NQIDHEVTV True PC9_epitope_Rep2 1053.50908787189 1053.50798993586 38.329 2 0.1253116974974455 0.001392563709789723 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 30098 19721 FYPPHPDYTW True PC9_epitope_Rep1 1321.5767735088898 1321.57566993586 80.684 2 0.12530380570082078 0.001392563709789723 0.9438714419765777 ['ENSG00000130309|ENST00000252599|COLGALT1'] 79467 6160 PGPPPPPPP True NCI_RA007_Epitope_Rep5 851.45413919507 851.45304993586 30.373 2 0.1253034691555114 0.001392563709789723 0.9438714419765777 ['ENST00000375142.5_2_1:19811931-19811970:-|nuORF', 'ENST00000584336.1_1_17:37686825-37687566:+|nuORF', 'ENSG00000136928|ENST00000259455|GABBR2', 'ENSG00000125966|ENST00000246186|MMP24', 'ENSG00000099822|ENST00000251287|HCN2', 'HCN2|p.R345Pfs*12|1|0.19|ENSG00000099822|chr19:603945-603945|G/-|frameshift_variant', 'HCN2|p.Y504Mfs*54|1|0.23|ENSG00000099822|chr19:610331-610331|T/-|frameshift_variant', 'nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'ENSG00000134775|ENST00000590592|FHOD3', 'FHOD3|p.M1132Rfs*19|1|0.5|ENSG00000134775|chr18:36744120-36744139|CCATGGTGGTAGAAAACTTC/-|frameshift_variant', 'ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENSG00000164916|ENST00000328914|FOXK1', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12'] 3988 20145 AHFPINVVI True PC9_epitope_Rep2 1008.5756513100799 1008.57454993586 82.9 2 0.12530111484139975 0.001392563709789723 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 22281 4782 ETDRGM[Oxidation]SAEY True H1975_Epitope_Rep3 1173.46081773057 1173.4597299358602 23.52 2 0.12529765565532325 0.001392563709789723 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 31549 10804 GEFQSFSSA True NCI_RA007_Epitope_Rep1 958.4032258210199 958.40267496793 46.021 1 0.12528625698077286 0.001392563709789723 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 37680 14676 HALGLLYHV True PC9_epitope_Rep2 1021.5709002828102 1021.56980993586 61.716 2 0.125286252551983 0.001392563709789723 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 62664 11388 LLVVTDPR True PC9_epitope_Rep2 911.54401682863 911.54290993586 49.126 2 0.12528260787560697 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000464073.1_1_14:77101591-77101843:-|nuORF', 'ENST00000416648.1_1_3:183605526-183606234:+|nuORF'] 130819 18674 VVFEIQGTTV True PC9_epitope_Rep6 1091.58627556343 1091.5851699358602 84.474 2 0.12527799909276963 0.001392563709789723 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 115281 11197 TVDNARIVL True PC9_epitope_Rep6 999.5712942056299 999.57018993586 54.044 2 0.12527763238374948 0.001392563709789723 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 102470 7449 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 34.028 2 0.12527467245235124 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 126772 5664 VPSLQGEKA True PC9_epitope_Rep4 927.5025459394699 927.50144993586 28.59 2 0.12527301077803685 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 96536 11950 SELPGAFEA True H1975_Epitope_Rep1 919.4287122928699 919.42816496793 50.97 1 0.1252673202856247 0.001392563709789723 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 21803 16542 ESDLPDELLY True H1975_Epitope_Rep2 1192.54994962436 1192.54937496793 68.854 1 0.12525706522552116 0.001392563709789723 0.9438714419765777 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 8364 19830 ATMPDLYHL True PC9_epitope_Rep5 1059.50591706775 1059.50480993586 81.322 2 0.12523602440450282 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000132792|Q8WYA6-4|CTNNBL1', 'ENSG00000132792|ENST00000361383|CTNNBL1', 'ENST00000373473.5_1_20:36374873-36393614:+|nuORF'] 89217 6184 REINTILKA True NCI_RA007_Epitope_Rep5 1056.62914343492 1056.6280499358602 30.466 2 0.12523182006885172 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'nc|ENSG00000008128|Q9UQ88-9|CDK11A', 'ENST00000598846.1_1_1:1635046-1639660:-|nuORF', 'ENST00000474916.1_1_1:1636243-1639664:-|nuORF', 'ENST00000468800.5_1_1:1635923-1638967:-|nuORF', 'ENST00000492390.5_1_1:1636243-1639660:-|nuORF'] 109532 20081 THALPIPVI True PC9_epitope_Rep1 959.5804023373499 959.57930993586 82.069 2 0.12523117399316078 0.001392563709789723 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 105925 8479 SVLDSTAKV True PC9_epitope_Rep6 918.5022115863 918.50110993586 42.326 2 0.1252274498871108 0.001392563709789723 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 63453 15585 LPGVDALSNI True H1975_Epitope_Rep3 997.5444107514501 997.5438649679301 65.364 1 0.12522636086412836 0.001392563709789723 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 127053 17463 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 72.422 2 0.12522245135562957 0.001392563709789723 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 113670 14457 TRDELEWKL True PC9_epitope_Rep4 1188.6138872935999 1188.61225490379 63.519 3 0.12522159677274491 0.001392563709789723 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 70465 18439 LYSEVSHLL True PC9_epitope_Rep2 1059.56006081559 1059.5589699358602 76.258 2 0.12521838306312388 0.001392563709789723 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 53394 14432 KVDVEVPDV True PC9_epitope_Rep2 998.5284263341398 998.5273299358599 60.781 2 0.1252035608867981 0.001392563709789723 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant'] 88464 21785 QYVVDLTSF True PC9_epitope_Rep2 1070.5284263341398 1070.52732993586 89.266 2 0.12520259555330507 0.001392563709789723 0.9438714419765777 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 1753 8157 AEHAGFAVP True H1975_Epitope_Rep2 897.4344663796498 897.43336993586 36.327 2 0.12520251601849405 0.001392563709789723 0.9438714419765777 ['ENST00000528717.1_1_11:102323683-102332276:+|nuORF'] 7977 3860 ATDM[Oxidation]PVKNQY True H1975_Epitope_Rep2 1181.5386741284499 1181.5375699358601 19.882 2 0.12519794433342515 0.001392563709789723 0.9438714419765777 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L', 'ENST00000597440.5_1_19:7913809-7917719:+|nuORF'] 109881 14682 THMTAIVGM True PC9_epitope_Rep5 959.4568587003499 959.45630496793 61.479 1 0.1251950707705699 0.001392563709789723 0.9438714419765777 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 64554 18662 LRDGQILEL True PC9_epitope_Rep3 1055.59750895347 1055.59640993586 77.001 2 0.12519009010337484 0.001392563709789723 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 95264 11245 SADPNVVDL True H1975_Epitope_Rep2 928.45017601344 928.44906993586 48.298 2 0.12518938794741077 0.001392563709789723 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 14381 17088 DTEPPPLLVY True H1975_Epitope_Rep1 1142.5859412102598 1142.58537496793 71.155 1 0.12518408915288487 0.001392563709789723 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 56926 6778 LEDRPSNLP True H1975_Epitope_Rep3 1039.52982331647 1039.5287299358602 31.026 2 0.12518280201397158 0.001392563709789723 0.9438714419765777 ['ENSG00000108239|ENST00000225235|TBC1D12'] 108964 7879 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46963496793 35.258 1 0.125182685966019 0.001392563709789723 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 53853 17394 KYGPVFSF True PC9_epitope_Rep6 943.4803539429099 943.47924993586 79.522 2 0.12518130105713857 0.001392563709789723 0.9438714419765777 ['ENSG00000001630|ENST00000003100|CYP51A1'] 120315 16246 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 67.629 2 0.12517913738033687 0.001392563709789723 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 132926 21202 VYTVVDEMF True PC9_epitope_Rep4 1101.5052483614097 1101.5041499358601 89.718 2 0.12517742944892526 0.001392563709789723 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 139978 19942 YVITDLTQL True PC9_epitope_Rep6 1064.57537652656 1064.57426993586 89.367 2 0.12517492831506596 0.001392563709789723 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 113314 15806 TQILSVPKV True PC9_epitope_Rep2 983.6015317047498 983.60042993586 66.058 2 0.12517351350003578 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 38032 4415 HEISEGNVATA True H1975_Epitope_Rep2 1126.52546621202 1126.52436993586 22.09 2 0.12517213995062265 0.001392563709789723 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1'] 9801 12206 AYLHTTTTF True PC9_epitope_Rep2 1053.51311062317 1053.51257496793 52.261 1 0.12517144585292916 0.001392563709789723 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 96300 7699 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43364496793 34.595 1 0.12517001790325705 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 94567 13905 RYIPTAAAF True PC9_epitope_Rep4 1008.5392658013599 1008.53816993586 61.389 2 0.12516898076828598 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 53931 4627 KYISKPENL True NCI_RA007_Epitope_Rep3 1090.60225998074 1090.60116993586 25.119 2 0.12516725089473174 0.001392563709789723 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 104100 9963 SRVTNNVVL True PC9_epitope_Rep1 1000.56654317836 1000.56544993586 43.187 2 0.12516501392791668 0.001392563709789723 0.9438714419765777 ['ENSG00000104147|ENST00000220514|OIP5'] 57188 8366 LEESSPIAA True H1975_Epitope_Rep2 915.4549270407099 915.4543749679301 37.133 1 0.1251648704607299 0.001392563709789723 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 72471 14271 M[Oxidation]VADKFTEL True PC9_epitope_Rep5 1068.51614777872 1068.5150499358601 59.897 2 0.12515845486624114 0.001392563709789723 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 63259 17167 LPALAGVSA True PC9_epitope_Rep4 797.46470387877 797.4641549679301 74.039 1 0.12515518750605928 0.001392563709789723 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 65361 12450 LSEPEEAAALY True H1975_Epitope_Rep3 1191.5659340416698 1191.56537496793 53.081 1 0.12515359284423613 0.001392563709789723 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant'] 124567 4698 VLGPTPVQK True NCI_RA007_Epitope_Rep5 937.55966689277 937.55856993586 24.756 2 0.125151284295687 0.001392563709789723 0.9438714419765777 ['ENSG00000166225|ENST00000549921|FRS2'] 11877 10239 DHNVSSVAI True PC9_epitope_Rep5 940.46140940348 940.46030993586 44.371 2 0.12515112011804438 0.001392563709789723 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 7331 4899 ARSTDQTVL True PC9_epitope_Rep4 989.51417325233 989.51306993586 25.439 2 0.12514679621124208 0.001392563709789723 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 47387 14647 IYIGGQEHF True PC9_epitope_Rep5 1062.5134449763398 1062.5123499358601 61.342 2 0.12513928817858733 0.001392563709789723 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 102626 22350 SQDAGIWYL True PC9_epitope_Rep1 1051.49746055903 1051.49636993586 90.784 2 0.12513897889076323 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 103477 7055 SRAPSTYTY True PC9_epitope_Rep5 1044.48762415132 1044.48652993586 32.105 2 0.12513854004487315 0.001392563709789723 0.9438714419765777 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3', 'nc|ENSG00000130363|Q86UC2-2|RSPH3'] 47254 15021 IYENRIYSL True PC9_epitope_Rep4 1169.6080736371698 1169.6069699358602 65.715 2 0.12513524119698022 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'ENSG00000244687|ENST00000371674|UBE2V1', 'nc|ENSG00000244687|Q13404-7|UBE2V1', 'nc|ENSG00000244687|Q13404-2|UBE2V1', 'ENST00000483534.5_1_20:48699307-48713022:-|nuORF', 'nc|ENSG00000244687|Q13404-6|UBE2V1', 'ENST00000467839.5_1_20:48700476-48729665:-|nuORF', 'ENST00000430836.1_1_20:3342707-3342845:-|nuORF', 'ENST00000397758.2_1_3:175436135-175436456:-|nuORF'] 83181 20513 PYTPFLTEL True PC9_epitope_Rep6 1079.55391280599 1079.55280993586 91.633 2 0.12513042089506474 0.001392563709789723 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 83187 15049 PYVNNVPHL True PC9_epitope_Rep3 1051.54507945779 1051.54398993586 63.016 2 0.125125190718437 0.001392563709789723 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 84016 5371 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47634993586 25.699 2 0.12512465916280427 0.001392563709789723 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 103262 20970 SQTDFSQLL True PC9_epitope_Rep2 1037.50293986229 1037.5023749679299 86.111 1 0.12510283468578878 0.001392563709789723 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 138941 5865 YSEGREFRY True H1975_Epitope_Rep2 1205.5465360097699 1205.54488490379 27.545 3 0.12509770603717657 0.001392563709789723 0.9438714419765777 ['ENSG00000103126|ENST00000262320|AXIN1', 'nc|ENSG00000103126|O15169-2|AXIN1', 'ENST00000461023.5_1_16:343426-396314:-|nuORF'] 8291 9236 ATLAAVLQR True NCI_RA007_Epitope_Rep5 941.56581490237 941.56470993586 42.176 2 0.12509742595900875 0.001392563709789723 0.9438714419765777 ['ENSG00000159399|ENST00000290573|HK2', 'HK2|p.L795Rfs*10|1|0.41|ENSG00000159399|chr2:74889253-74889262|TGGCCCTGCT/-|frameshift_variant'] 97682 14680 SHDLPSVL True PC9_epitope_Rep1 866.44978209062 866.44868993586 61.289 2 0.12508945376819047 0.001392563709789723 0.9438714419765777 ['ENSG00000103148|ENST00000611875|NPRL3'] 107927 11339 TAVTVNQSL True PC9_epitope_Rep4 931.4974605590301 931.49636993586 51.392 2 0.12508678772119888 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 102566 17048 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51289496793 70.827 1 0.1250854105826048 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 6340 6348 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 29.393 2 0.12508425280665544 0.001392563709789723 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 41170 21313 HYTYILEVF True PC9_epitope_Rep2 1183.5913609438696 1183.59026993586 87.444 2 0.1250784964765409 0.001392563709789723 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 96170 13422 SEEFPSFGA True H1975_Epitope_Rep2 969.4079768482899 969.4074249679301 56.763 1 0.12507147887856115 0.001392563709789723 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 84232 4601 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 22.802 2 0.12506872951508707 0.001392563709789723 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 73851 12115 NHFMDNTTL True PC9_epitope_Rep4 1091.47059418819 1091.46948993586 54.408 2 0.12506773386072373 0.001392563709789723 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 6693 22208 AQAQEVFFL True PC9_epitope_Rep5 1051.53384606775 1051.53274993586 90.435 2 0.12506208395679183 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 12649 9284 DLEIATYR True H1975_Epitope_Rep3 979.4974605590301 979.49691496793 40.705 1 0.1250617550295193 0.001392563709789723 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 74816 17905 NLPDEIYHV True PC9_epitope_Rep3 1098.5345743437401 1098.53346993586 74.073 2 0.12505787118247594 0.001392563709789723 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 47108 8669 IVVVTAGVR True PC9_epitope_Rep6 912.5756513100798 912.57454993586 43.189 2 0.12505275638041366 0.001392563709789723 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 37951 4860 HEEPSATVP True H1975_Epitope_Rep3 965.4454249861699 965.44432993586 23.82 2 0.12504666367276374 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP'] 117117 20894 TYSIGFLRF True PC9_epitope_Rep4 1102.5811306133398 1102.58002993586 88.527 2 0.1250428236252097 0.001392563709789723 0.9438714419765777 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF', 'ENST00000468535.5_1_7:1589488-1590526:-|nuORF', 'ENST00000474813.5_1_7:1589488-1595099:-|nuORF', 'ENSG00000164855|ENST00000297477|TMEM184A'] 46645 15165 ITVEKIIKI True PC9_epitope_Rep2 1055.69543208959 1055.6943299358602 63.59 2 0.1250426297508228 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 28991 15698 FTHSQFIVV True PC9_epitope_Rep6 1076.5654805492 1076.5643899358602 72.593 2 0.1250413000786551 0.001392563709789723 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 139854 15500 YVDPQFLTY True H1975_Epitope_Rep1 1144.54407639828 1144.5429699358601 64.894 2 0.12503853832526188 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 113738 17871 TRDGNVFLVP True PC9_epitope_Rep5 1116.5927579262 1116.5916699358602 73.759 2 0.12503822050466826 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 134944 10108 YAEVGRVL True PC9_epitope_Rep6 905.4970666362099 905.49596993586 49.488 2 0.1250347844376688 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 109865 11763 THMPSVVGV True PC9_epitope_Rep4 925.4691376362099 925.46804993586 53.012 2 0.12503023299718044 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 70792 9605 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42717496793 41.921 1 0.12502082955275756 0.001392563709789723 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 100486 11625 SLPKGVVEV True PC9_epitope_Rep4 926.54368247546 926.54258993586 52.473 2 0.12501846734820943 0.001392563709789723 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 96763 8327 SEQPTLVTA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 36.98 1 0.125017120479415 0.001392563709789723 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 128896 10230 VSTEVDARL True PC9_epitope_Rep3 988.5189242795998 988.51782993586 44.3 2 0.1250158526791852 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 30267 8536 GAAKDLPGV True PC9_epitope_Rep5 826.4548674710599 826.45376993586 37.776 2 0.12500368118194508 0.001392563709789723 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 113088 19503 TPYNYPVPV True PC9_epitope_Rep3 1048.5229470308798 1048.52184993586 80.251 2 0.12499820213841333 0.001392563709789723 0.9438714419765777 ['ENSG00000170906|ENST00000485876|NDUFA3'] 72352 8792 M[Oxidation]TEEEQIAY True H1975_Epitope_Rep1 1128.4645061286797 1128.46340993586 38.748 2 0.1249941548525519 0.001392563709789723 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 75746 14677 NRADGNFLL True PC9_epitope_Rep4 1018.51959298594 1018.51848993586 64.391 2 0.12498391723426372 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930', 'ENST00000483374.1_1_22:45593059-45593908:-|nuORF', 'ENST00000498418.5_1_22:45593059-45595943:-|nuORF', 'ENST00000474515.5_1_22:45593059-45598540:-|nuORF'] 30259 8622 GAAKDLPGV True PC9_epitope_Rep1 826.4548674710599 826.45376993586 38.002 2 0.12498189425226308 0.001392563709789723 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 41044 19156 HYILHNSFF True PC9_epitope_Rep3 1176.5716285587998 1176.5705299358601 78.904 2 0.12497963058283292 0.001392563709789723 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 102331 5324 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 27.194 2 0.12497244302874862 0.001392563709789723 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 75919 6663 NRDVAKTVL True PC9_epitope_Rep1 1014.5821932424999 1014.58108993586 30.433 2 0.1249675816590492 0.001392563709789723 0.9438714419765777 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000474988.5_1_6:36410818-36454949:+|nuORF', 'nc|ENSG00000112078|Q7Z5Y7-2|KCTD20'] 27102 20606 FLQEGDLISA True PC9_epitope_Rep3 1091.54989005471 1091.54937496793 84.529 1 0.12496308261938396 0.001392563709789723 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 53838 10723 KYGNANVW True PC9_epitope_Rep3 950.46101548066 950.45990993586 46.2 2 0.12495785652549772 0.001392563709789723 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 61704 20775 LLIENVASL True PC9_epitope_Rep4 970.5698972232999 970.5693449679301 88.06 1 0.12495737746481154 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1', 'ENST00000388829.3_1_X:13397321-13397372:-|nuORF', 'ENST00000419783.1_2_3:49395567-49395990:-|nuORF'] 30162 20546 FYSNIQTVI True PC9_epitope_Rep2 1083.5600608155898 1083.5589699358602 84.463 2 0.12494801023363215 0.001392563709789723 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 84559 9182 QHDDQQPVVL True PC9_epitope_Rep4 1177.5727507576098 1177.57164993586 42.913 2 0.12494032667386452 0.001392563709789723 0.9438714419765777 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 87421 14923 QTEDNMLFY True H1975_Epitope_Rep2 1159.4855755459898 1159.48446993586 62.555 2 0.12493592952608479 0.001392563709789723 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 6296 4877 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 24.126 2 0.12492349468292394 0.001392563709789723 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 44719 12550 IPQEAYNAV True PC9_epitope_Rep4 1003.49746055903 1003.49636993586 56.095 2 0.12490667011305202 0.001392563709789723 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 42455 6805 IEQPNVASA True H1975_Epitope_Rep2 927.4661604307499 927.46506993586 31.093 2 0.12490372725229092 0.001392563709789723 0.9438714419765777 ['ENSG00000197070|ENST00000371421|ARRDC1'] 43341 17704 IHIITGVAV True PC9_epitope_Rep3 921.5647522732099 921.56364993586 73.295 2 0.12489411372288538 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 40299 9821 HRQEIQVVL True PC9_epitope_Rep6 1120.63529144452 1120.6341899358601 48.239 2 0.12488762491073231 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 36430 21815 GVIGGGVFQAI True PC9_epitope_Rep5 1016.5654805491998 1016.56438993586 88.944 2 0.12488168743251314 0.001392563709789723 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 76483 10784 NTDFYQTSY True H1975_Epitope_Rep1 1137.46146897313 1137.4608749679298 46.443 1 0.12487027617340092 0.001392563709789723 0.9438714419765777 ['ENST00000522203.5_1_5:143545115-143549519:-|nuORF', 'ENST00000508754.1_1_5:143543641-143549519:-|nuORF', 'ENSG00000145817|ENST00000274496|YIPF5', 'nc|ENSG00000145817|Q969M3-3|YIPF5'] 91543 19483 RPADVIFATV True PC9_epitope_Rep5 1087.60259433391 1087.6014899358602 79.994 2 0.12486661153062353 0.001392563709789723 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 105834 14066 SVIQNLRTV True PC9_epitope_Rep3 1028.5978433066398 1028.59674993586 59.192 2 0.12486541674683513 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 75727 7232 NQWDGTQHGV True PC9_epitope_Rep4 1140.49483479008 1140.49372993586 35.123 2 0.12485758167870138 0.001392563709789723 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 13954 12114 DRLKLQNEL True PC9_epitope_Rep5 1127.62987171091 1127.6287699358602 51.587 2 0.12485694106177335 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 1115 5633 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44286993586 26.667 2 0.1248509248149571 0.001392563709789723 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 78171 6010 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 30.622 2 0.12484926349965336 0.001392563709789723 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 5471 11485 AMDPVSVSY True H1975_Epitope_Rep3 967.4320834211501 967.43153496793 49.299 1 0.12483611771067249 0.001392563709789723 0.9438714419765777 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3', 'KLF3|p.V36Sfs*31|1|0.12|ENSG00000109787|chr4:38688630-38688630|G/-|frameshift_variant'] 128310 10260 VSDAVATYY True H1975_Epitope_Rep3 987.4549270407101 987.4543749679301 44.513 1 0.12482953134144004 0.001392563709789723 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF'] 57347 4653 LEHAISPSA True H1975_Epitope_Rep3 923.47124581119 923.47014993586 23.021 2 0.12482332449160573 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000169696|Q9BZE9-3|ASPSCR1', 'ENSG00000169696|ENST00000306739|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-2|ASPSCR1', 'ENST00000585274.1_1_17:79974599-79974746:+|nuORF', 'ENST00000578236.5_1_17:79966858-79974746:+|nuORF', 'ENST00000577733.5_1_17:79966858-79975195:+|nuORF', 'TBCD-ASPSCR1|1|fusion', 'TBCD-ASPSCR1|2|fusion', 'ENST00000578361.5_1_17:79969964-79975195:+|nuORF'] 70921 12627 M[Oxidation]ELITPISA True H1975_Epitope_Rep3 989.5103341222899 989.50922993586 53.774 2 0.12481943435921775 0.001392563709789723 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 76216 10488 NRYDGIYKV True PC9_epitope_Rep3 1126.5771078620598 1126.5754649037901 45.281 3 0.1248154263962934 0.001392563709789723 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 31985 12137 GETEVGFVP True H1975_Epitope_Rep2 933.4443623570098 933.44381496793 51.769 1 0.12481165452182642 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant'] 28155 15283 FRLKYENEL True PC9_epitope_Rep1 1210.6346227381798 1210.63297490379 63.608 3 0.12480616143130756 0.001392563709789723 0.9438714419765777 ['CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant', 'nc|ENSG00000171401|P13646-2|KRT13', 'ENSG00000167916|ENST00000264651|KRT24', 'CON__Q2M2I5', 'CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15', 'CON__A2A4G1', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000186393|ENST00000335552|KRT26', 'CON__Q7Z3Y9'] 98764 7245 SISETYDLK True H1975_Epitope_Rep3 1054.5182555732597 1054.51714993586 32.84 2 0.12480302322101643 0.001392563709789723 0.9438714419765777 ['CON__P34955'] 27456 13752 FNPFVTSDR True PC9_epitope_Rep4 1081.51925863277 1081.5181699358602 60.794 2 0.12480256270780075 0.001392563709789723 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 46310 4953 ITESEEVVSR True H1975_Epitope_Rep3 1147.57208205127 1147.57098993586 24.179 2 0.12480087293771135 0.001392563709789723 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 44604 20002 IPHLLGDVV True PC9_epitope_Rep5 961.55966689277 961.55856993586 81.991 2 0.12479591392904363 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 48405 4365 KEDKPPLAP True H1975_Epitope_Rep2 993.5494961318898 993.54838993586 21.903 2 0.12479502113057281 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 90593 4520 RKIKVSNTL True NCI_RA007_Epitope_Rep2 1057.66077791637 1057.6596899358601 22.213 2 0.12478809529065868 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000131100|P36543-3|ATP6V1E1', 'nc|ENSG00000131100|P36543-2|ATP6V1E1', 'ENSG00000131100|ENST00000253413|ATP6V1E1'] 67334 21894 LTDQTLIYL True PC9_epitope_Rep5 1078.5910265906998 1078.58992993586 89.253 2 0.1247875802851978 0.0014243034808587508 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 106801 19303 SYGKINILL True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 79.624 2 0.12478715252109876 0.0014243034808587508 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant'] 2222 7958 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.43850993586 35.558 2 0.1247840671688336 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 73996 7743 NHQGTYVL True PC9_epitope_Rep2 930.4559301002199 930.45482993586 35.158 2 0.12477089782817138 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 139916 12765 YVFPGVTRL True H1975_Epitope_Rep1 1050.58621599378 1050.5851099358601 54.161 2 0.12477069190071806 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 98506 18634 SILFVPTSAPR True PC9_epitope_Rep1 1186.6710082468999 1186.66990993586 76.464 2 0.12476007413187316 0.0014243034808587508 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 52549 6695 KPSESIYSA True PC9_epitope_Rep1 980.48147614172 980.48036993586 30.555 2 0.12475890513411822 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000189057|Q6SJ93-2|FAM111B', 'ENSG00000189057|ENST00000343597|FAM111B'] 52897 15056 KRGDVIYIL True PC9_epitope_Rep2 1075.6389798426299 1075.6378899358601 63.171 2 0.12475786593214057 0.0014243034808587508 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENSG00000005020|ENST00000345317|SKAP2'] 48816 5509 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 26.202 2 0.12475733660132132 0.0014243034808587508 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 105243 5250 STSNSFNLK True NCI_RA007_Epitope_Rep3 996.48762415132 996.48652993586 27.653 2 0.12475373076197724 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 127358 7294 VQPSKYHFL True NCI_RA007_Epitope_Rep3 1117.5920296502102 1117.59092993586 35.8 2 0.1247522115404437 0.0014243034808587508 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 125474 17349 VLVDAFSHV True PC9_epitope_Rep4 985.5232813840499 985.52218993586 74.736 2 0.12475202699841964 0.0014243034808587508 0.9438714419765777 ['ENSG00000101413|ENST00000373433|RPRD1B'] 140332 11140 YYEEQHPEL True PC9_epitope_Rep5 1206.5193182024198 1206.51822993586 47.835 2 0.12474469261248647 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 75792 11798 NRAQIQAVI True PC9_epitope_Rep5 1011.58252759567 1011.58142993586 50.378 2 0.12473598657532352 0.0014243034808587508 0.9438714419765777 ['ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 1834 12026 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.4856749679301 51.419 1 0.12473588963770445 0.0014243034808587508 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 52493 9639 KPNEGAIVEV True PC9_epitope_Rep2 1054.56587447202 1054.56476993586 42.418 2 0.1247358320518307 0.0014243034808587508 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 74089 9215 NHVASDISL True PC9_epitope_Rep6 954.47705946762 954.47596993586 45.586 2 0.12473546713733982 0.0014243034808587508 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 89668 6315 REVDPPMGP True H1975_Epitope_Rep2 996.4698659121999 996.46876993586 29.226 2 0.12473166487242032 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 128900 9258 VSTEVDARL True PC9_epitope_Rep4 988.5189242795998 988.51782993586 43.208 2 0.12472878377835575 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 133289 11951 WELVTREVP True H1975_Epitope_Rep1 1127.59750895347 1127.59640993586 50.973 2 0.12472428498947817 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 98156 6959 SIDDLEEK True PC9_epitope_Rep2 947.44475627983 947.44364993586 32.165 2 0.12472399652020254 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 43515 22975 IIDDTIFNL True PC9_epitope_Rep5 1062.55972646242 1062.5586299358602 93.363 2 0.12471255581604049 0.0014243034808587508 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 78181 8610 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 37.954 2 0.12471020062684432 0.0014243034808587508 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 37983 5795 HEGPGSELP True H1975_Epitope_Rep3 921.4192102383299 921.41810993586 27.314 2 0.12470902770677941 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENSG00000204843|ENST00000628224|DCTN1'] 138352 9241 YRDEADVL True PC9_epitope_Rep4 979.4610750503098 979.45996993586 43.143 2 0.12470622125405699 0.0014243034808587508 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 105964 13461 SVLGKVNEI True PC9_epitope_Rep5 957.54949613189 957.54838993586 56.796 2 0.12470155161459909 0.0014243034808587508 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 103104 21142 SQLPNFWKL True PC9_epitope_Rep3 1131.60767971435 1131.60658993586 86.608 2 0.1247013955223596 0.0014243034808587508 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 83713 5657 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.46432993586 26.789 2 0.12470024979463822 0.0014243034808587508 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 31766 11023 GELLFVHSA True H1975_Epitope_Rep2 971.50763131991 971.50652993586 47.429 2 0.12469932364505007 0.0014243034808587508 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 88509 9314 RADDTFEAL True NCI_RA007_Epitope_Rep3 1036.48253877088 1036.4814499358602 43.738 2 0.12469892177297698 0.0014243034808587508 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 109620 15988 THDGSILIV True PC9_epitope_Rep3 953.51819600361 953.51708993586 66.642 2 0.12469773431639473 0.0014243034808587508 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 1079 4738 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.3913849679301 23.316 1 0.12469412255234336 0.0014243034808587508 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 31707 10230 GEIPKVLVA True H1975_Epitope_Rep2 924.5644179200399 924.56332993586 44.355 2 0.12469286444721508 0.0014243034808587508 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'AP2A2-PSMD13|2|fusion', 'AP2A2-PSMD13|3|fusion', 'AP2A2-PSMD13|1|fusion', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 103355 14468 SQVFKLYTA True PC9_epitope_Rep4 1055.56514619603 1055.56404993586 63.562 2 0.12469263768869784 0.0014243034808587508 0.9438714419765777 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-2|ANAPC5', 'ENST00000534976.5_1_12:121766230-121783868:-|nuORF', 'ENST00000541652.5_1_12:121773337-121785669:-|nuORF'] 127225 21069 VQIGDIVTV True PC9_epitope_Rep1 942.5385970950199 942.53750993586 85.874 2 0.1246880190740135 0.0014243034808587508 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 10037 15692 AYVEDTVLF True NCI_RA007_Epitope_Rep3 1055.51752729727 1055.51642993586 69.358 2 0.1246866187656857 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 93607 4192 RSYSDPPLK True NCI_RA007_Epitope_Rep4 1061.5505587610498 1061.54946993586 22.431 2 0.12468560857302934 0.0014243034808587508 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 2964 18029 AFIEKHWTF True PC9_epitope_Rep5 1177.59202965021 1177.5903749037902 74.364 3 0.12467774792568681 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 89418 4545 REPNAEVPRP True H1975_Epitope_Rep2 1163.6047195922297 1163.60308490379 22.591 3 0.12467270547607236 0.0014243034808587508 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 31321 11744 GEAEAFAIGA True NCI_RA007_Epitope_Rep4 934.4396113297398 934.4390649679301 52.143 1 0.12467227543860765 0.0014243034808587508 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 109866 11853 THMPSVVGV True PC9_epitope_Rep4 925.4691376362099 925.46804993586 53.369 2 0.1246692305748774 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 89651 8646 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 38.215 2 0.12466820724441331 0.0014243034808587508 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 2583 7491 AESDHMAIP True H1975_Epitope_Rep3 969.42258136661 969.42148993586 33.795 2 0.12465836602045188 0.0014243034808587508 0.9438714419765777 ['ENSG00000160294|ENST00000291688|MCM3AP', 'MCM3AP|p.E650Rfs*6|1|0.3|ENSG00000160294|chr21:46275236-46275236|C/-|frameshift_variant'] 52458 10760 KPIEELQNV True PC9_epitope_Rep2 1068.58152453616 1068.5804299358601 46.707 2 0.1246560446772395 0.0014243034808587508 0.9438714419765777 ['ENSG00000166920|ENST00000396650|C15orf48'] 105717 9612 SVHKGFAFV True PC9_epitope_Rep4 990.5287011176598 990.52760993586 44.598 2 0.1246490594644157 0.0014243034808587508 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 48570 10356 KEIADYLAA True H1975_Epitope_Rep2 992.51786165044 992.51676993586 44.843 2 0.1246481516083186 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 55720 8769 LDDLVSTGK True PC9_epitope_Rep3 946.49712620586 946.49602993586 38.682 2 0.12464253582020433 0.0014243034808587508 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 94912 16082 RYPDRITLI True PC9_epitope_Rep3 1145.65569253593 1145.65458993586 67.009 2 0.1246395775442533 0.0014243034808587508 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 34583 19841 GQGEVLVYV True PC9_epitope_Rep2 962.5072969667398 962.50618993586 81.709 2 0.12463123727432458 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 74796 20077 NLNPEFISV True PC9_epitope_Rep4 1031.5287606873098 1031.52766993586 85.359 2 0.12463033016324347 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 90609 4033 RKKHLEDEL True NCI_RA007_Epitope_Rep4 1166.64077074778 1166.6391149037902 21.772 3 0.12462986230206433 0.0014243034808587508 0.9438714419765777 ['ENSG00000117862|ENST00000371626|TXNDC12'] 89081 4318 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6032899358602 21.726 2 0.12462210053487299 0.0014243034808587508 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 120165 18515 VFLENVIR True PC9_epitope_Rep3 988.5705659296399 988.56946993586 76.437 2 0.12462124181755295 0.0014243034808587508 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 105464 7192 SVASISLTK True NCI_RA007_Epitope_Rep4 904.52294703088 904.52239496793 34.289 1 0.12461834008405634 0.0014243034808587508 0.9438714419765777 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 33702 9958 GLQFPVGR True NCI_RA007_Epitope_Rep1 872.4868363056798 872.48572993586 42.738 2 0.12461699308699534 0.0014243034808587508 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'H2AC21|p.R33G|1|0.15|ENSG00000184270|chr1:149887820-149887820|G/C|missense_variant', 'H2AC11|p.A22P|1|0.21|ENSG00000278677|chr6:27133135-27133135|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 129837 18963 VTLGPVPEI True PC9_epitope_Rep6 923.53278343859 923.53168993586 85.586 2 0.12461580282029189 0.0014243034808587508 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 136645 15159 YIDPSGFVKA True PC9_epitope_Rep6 1095.5600608155898 1095.5589699358602 70.385 2 0.12461520321699404 0.0014243034808587508 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48', 'nc|ENSG00000090686|Q86UV5-4|USP48', 'nc|ENSG00000090686|Q86UV5-7|USP48'] 106945 21630 SYLDNFIKI True PC9_epitope_Rep3 1111.59136094387 1111.59026993586 88.498 2 0.12460992523794064 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 57100 8648 LEEMEAPAA True H1975_Epitope_Rep2 959.4269980407098 959.42644496793 38.223 1 0.12460478352350657 0.0014243034808587508 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 84825 19668 QHLPYIQIL True PC9_epitope_Rep4 1123.6389798426299 1123.6378899358601 83.772 2 0.12458216633216794 0.0014576247657388768 0.9438714419765777 ['ENST00000576646.7_1_17:1412470-1416845:-|nuORF', 'nc|ENSG00000132376|Q9BT40-2|INPP5K', 'ENST00000350761.9_1_17:1399119-1419845:-|nuORF', 'ENSG00000132376|ENST00000421807|INPP5K'] 75540 14076 NQLEGKWAV True PC9_epitope_Rep5 1043.53999407735 1043.5388899358602 59.157 2 0.12458209103770324 0.0014576247657388768 0.9438714419765777 ['ENSG00000204946|ENST00000434415|ZNF783', 'nc|ENSG00000291118|Q75MW2-2|ZNF767P', 'ENST00000472212.5_1_7:149318233-149321683:-|nuORF', 'ENST00000483892.5_1_7:148845372-148863263:+|nuORF', 'nc|ENSG00000291118|Q75MW2|ZNF767P', 'ENST00000463567.5_1_7:149255903-149321683:-|nuORF', 'nc|ENSG00000204946|Q6ZMS7-1|ZNF783', 'ENSG00000197024|ENST00000475153|ZNF398', 'nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746'] 70930 15262 MELITPISA True H1975_Epitope_Rep2 973.5154191222899 973.51487496793 63.864 1 0.12458151403451173 0.0014576247657388768 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 65062 12687 LSDLGISSY True H1975_Epitope_Rep2 953.47057710485 953.46948993586 53.901 2 0.12457749753156913 0.0014576247657388768 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1'] 110652 17831 TIVNELVRV True PC9_epitope_Rep4 1041.61824439805 1041.6171499358602 76.621 2 0.12456428278095653 0.0014576247657388768 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 27453 15154 FNPFVTSDR True PC9_epitope_Rep1 1081.51925863277 1081.5181699358602 63.111 2 0.12456356191444717 0.0014576247657388768 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 2876 5205 AEYNGRLAA True NCI_RA007_Epitope_Rep4 963.4773938207899 963.47628993586 26.557 2 0.12456274728728564 0.0014576247657388768 0.9438714419765777 ['ENSG00000101413|ENST00000373433|RPRD1B'] 75905 7469 NRDRTQIAL True PC9_epitope_Rep5 1085.59415490853 1085.59304993586 33.682 2 0.12456072666397339 0.0014576247657388768 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 137560 15998 YLSEEVQAV True PC9_epitope_Rep5 1036.5076908895599 1036.5065899358601 66.526 2 0.12455885772622381 0.0014576247657388768 0.9438714419765777 ['ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000496047.5_1_2:85872080-85873002:+|nuORF'] 13191 15482 DLTDYLM[Oxidation]K True PC9_epitope_Rep6 1013.47394861357 1013.47284993586 71.722 2 0.12455816647133662 0.0014576247657388768 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 2936 14217 AFFSEVER True PC9_epitope_Rep1 983.4712458111899 983.47014993586 59.508 2 0.12455798809655173 0.0014576247657388768 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000552266.1_1_12:56504402-56504480:+|nuORF'] 46240 9120 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.5496749679298 40.032 1 0.12455494677765377 0.0014576247657388768 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 84652 12449 QHEEFVTSL True PC9_epitope_Rep6 1088.51383889916 1088.51274993586 59.313 2 0.12454517246308461 0.0014576247657388768 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 114303 8254 TSALPIIQK True NCI_RA007_Epitope_Rep5 969.58588164061 969.5853349679301 38.428 1 0.12454504453171888 0.0014576247657388768 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 108917 7378 TESSWHEIA True H1975_Epitope_Rep3 1058.4668887067398 1058.4657899358601 33.357 2 0.12454378323595978 0.0014576247657388768 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 40846 12263 HVLEEVQQV True PC9_epitope_Rep5 1079.56112344475 1079.56002993586 52.158 2 0.12454186825431514 0.0014576247657388768 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 88198 23285 QYAPLLAVF True PC9_epitope_Rep3 1020.5644179200399 1020.56387496793 94.846 1 0.12453686086551054 0.0014576247657388768 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 138811 5371 YSDINQEHV True H1975_Epitope_Rep3 1103.48835242731 1103.48724993586 25.726 2 0.12453550001144832 0.0014576247657388768 0.9438714419765777 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644'] 89832 22217 RFLAATFLL True PC9_epitope_Rep1 1050.6226015025 1050.62150993586 90.28 2 0.12453345767317922 0.0014576247657388768 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 103456 14783 SRAGLQFPV True PC9_epitope_Rep4 973.53451477409 973.53340993586 64.795 2 0.12452661968639903 0.0014576247657388768 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC4|p.R30Q|1|0.07|ENSG00000278463|chr6:26033480-26033480|C/T|missense_variant', 'H2AC13|p.R30P|1|0.16|ENSG00000196747|chr6:27808298-27808298|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 102423 12112 SPVYVGRVV True PC9_epitope_Rep1 974.5549158654999 974.55380993586 51.451 2 0.12452205673298374 0.0014576247657388768 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 6708 4039 AQDEERQASL True PC9_epitope_Rep4 1145.53127986845 1145.53018993586 21.797 2 0.12452202169301399 0.0014576247657388768 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT'] 109969 10653 THSLTTPVV True PC9_epitope_Rep1 953.51819600361 953.51708993586 45.868 2 0.12451893352893847 0.0014576247657388768 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 29474 20822 FVIDGFDEL True PC9_epitope_Rep6 1053.50187723313 1053.50137496793 92.864 1 0.12451883104380268 0.0014576247657388768 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 62663 8082 LLVVTDPR True NCI_RA007_Epitope_Rep5 911.54401682863 911.54290993586 37.775 2 0.12451754629555432 0.0014576247657388768 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000464073.1_1_14:77101591-77101843:-|nuORF', 'ENST00000416648.1_1_3:183605526-183606234:+|nuORF'] 40039 7692 HQVPAVSSV True PC9_epitope_Rep3 922.4872302285 922.48612993586 34.584 2 0.1245166456214576 0.0014576247657388768 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 136473 14138 YHHGYSYIL True PC9_epitope_Rep1 1151.53999407735 1151.5388899358602 59.206 2 0.1245100418258704 0.0014576247657388768 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 83687 10742 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 46.346 2 0.12450512187240617 0.0014576247657388768 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 75705 20271 NQVGIVLNV True PC9_epitope_Rep2 954.5498304850599 954.54872993586 83.394 2 0.12449913309979446 0.0014917088739332548 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'ENST00000467287.5_1_1:151401965-151414680:-|nuORF', 'nc|ENSG00000143442|Q7Z3K3-4|POGZ'] 84976 11146 QIDPTIQRV True PC9_epitope_Rep3 1068.5927579262 1068.5916699358602 47.872 2 0.12449769938753218 0.0014917088739332548 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q922U2'] 98027 16564 SHTDVVPVF True PC9_epitope_Rep1 999.50254593947 999.50144993586 68.536 2 0.12449730815675045 0.0014917088739332548 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 118972 5543 VEFATHEEA True H1975_Epitope_Rep2 1031.4559896698697 1031.4548899358601 26.329 2 0.12449613621415846 0.0014917088739332548 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 9158 4061 AVNAHSNILK True NCI_RA007_Epitope_Rep4 1065.59309227937 1065.59198993586 21.891 2 0.12448694996908163 0.0014917088739332548 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF', 'ENST00000490238.5_1_2:86389097-86393741:-|nuORF', 'ENST00000435590.1_1_21:46097057-46097849:-|nuORF'] 109536 17885 THALPIPVI True PC9_epitope_Rep6 959.5804023373499 959.57930993586 81.42 2 0.12448055087306331 0.0014917088739332548 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 8573 5905 AVADSVLTK True NCI_RA007_Epitope_Rep4 902.50729696674 902.50618993586 29.336 2 0.12447666419461366 0.0014917088739332548 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF'] 48960 8959 KEYLQGLEA True H1975_Epitope_Rep3 1049.5393253710097 1049.53822993586 39.456 2 0.12447645118077938 0.0014917088739332548 0.9438714419765777 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000475705.1_1_6:32086681-32087735:-|nuORF'] 29314 11990 FVDPSQDHAL True PC9_epitope_Rep2 1127.52473793603 1127.52364993586 51.438 2 0.12447302493081563 0.0014917088739332548 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 89139 4595 REFTDSAEA True NCI_RA007_Epitope_Rep4 1024.4461532621597 1024.4450499358602 24.084 2 0.12446260699391258 0.0014917088739332548 0.9438714419765777 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL'] 98428 21861 SIIQRLLEV True PC9_epitope_Rep5 1069.64954452633 1069.64844993586 89.125 2 0.12445980013141247 0.0014917088739332548 0.9438714419765777 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 129316 14275 VTDSGPTFNYL True H1975_Epitope_Rep3 1212.56626839484 1212.56567496793 60.252 1 0.12445592256987267 0.0014917088739332548 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 17764 5939 EHVASSPAL True PC9_epitope_Rep2 909.4555957470499 909.45448993586 28.234 2 0.12444373475231883 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 42208 7851 IEGQGVFREA True NCI_RA007_Epitope_Rep4 1104.55637241748 1104.55526993586 36.903 2 0.12444267070028422 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 23875 15734 EYM[Oxidation]EHVYLI True PC9_epitope_Rep6 1211.5532615634297 1211.55216993586 72.746 2 0.12444178369622831 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 83041 21886 PYLDSFYEY True PC9_epitope_Rep1 1195.5073565363898 1195.50677496793 88.997 1 0.12444152670474669 0.0015110409011298465 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 102922 15828 SQIHDIVLV True PC9_epitope_Rep4 1022.5760452328999 1022.5754749679301 68.805 1 0.1244395377935579 0.0015110409011298465 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 7140 11337 AQYEHDLEVA True PC9_epitope_Rep5 1173.5302172392899 1173.52912993586 48.604 2 0.12443835313174832 0.0015110409011298465 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 94483 14717 RYGSDFYSM True PC9_epitope_Rep2 1124.45969515132 1124.4585899358601 61.876 2 0.1244366334366675 0.0015110409011298465 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 17042 5308 EGM[Oxidation]NIVEAM[Oxidation]ER True H1975_Epitope_Rep3 1309.5642376337298 1309.5631299358602 25.493 2 0.1244336750945901 0.0015110409011298465 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA'] 91057 18912 RLLETVIDV True PC9_epitope_Rep4 1056.61791004488 1056.6168099358601 80.832 2 0.1244288900392427 0.0015110409011298465 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 37657 13553 HAGVISVL True PC9_epitope_Rep2 794.46503823194 794.46448496793 57.424 1 0.12442876027272176 0.0015110409011298465 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 7456 12347 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep2 1084.4746768895598 1084.47417496793 52.577 1 0.12442430578622728 0.0015110409011298465 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 29748 6918 FVQYVNER True NCI_RA007_Epitope_Rep2 1053.5243440132097 1053.5232499358601 31.529 2 0.12442280751690639 0.0015110409011298465 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENST00000528764.1_1_11:86735664-86735814:+|nuORF'] 82969 14468 PYAKPIPAQF True PC9_epitope_Rep5 1130.6124307416196 1130.61132993586 60.652 2 0.12441887547239205 0.0015110409011298465 0.9438714419765777 ['ENSG00000136709|ENST00000322313|WDR33'] 60176 13388 LHYPSTTAL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 56.513 2 0.12441598689972652 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 84065 12824 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 54.436 2 0.12441403618150175 0.0015110409011298465 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 127734 4975 VRKDLQNF True NCI_RA007_Epitope_Rep4 1018.5559784946599 1018.55488993586 25.609 2 0.12440790447070282 0.0015110409011298465 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 27735 20984 FQDQQILTL True PC9_epitope_Rep2 1104.58152453616 1104.5804299358601 86.166 2 0.1244069799062124 0.0015110409011298465 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 41442 19791 IAVNAVLTV True PC9_epitope_Rep4 898.5487678559 898.54766993586 84.252 2 0.12440636878506209 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 99966 22023 SLINVGLISV True PC9_epitope_Rep4 1013.6120963884499 1013.6115749679301 92.934 1 0.12440356935539629 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 42436 6477 IEQETPVSA True H1975_Epitope_Rep3 972.4763907612798 972.47584496793 29.882 1 0.12439485474892158 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2', 'ENST00000395449.7_1_11:47187835-47198404:-|nuORF'] 88915 4543 RECTIEATA True NCI_RA007_Epitope_Rep5 992.4596951513198 992.45858993586 24.131 2 0.1243890937652422 0.0015110409011298465 0.9438714419765777 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 9194 16149 AVPEIMDRI True PC9_epitope_Rep6 1042.5481162329 1042.5470099358602 74.468 2 0.12438712520076102 0.0015110409011298465 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 86502 18244 QRADDILDL True PC9_epitope_Rep2 1057.54038800017 1057.53928993586 75.495 2 0.12438632743437737 0.0015110409011298465 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000530314.5_1_16:70543112-70557304:-|nuORF', 'ENST00000562200.5_1_16:70543798-70557434:-|nuORF', 'nc|ENSG00000103051|Q9H9E3-2|COG4'] 102519 17166 SQADVIPAV True PC9_epitope_Rep1 898.4759968384599 898.47488993586 70.849 2 0.12438551995224988 0.0015110409011298465 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 97719 14991 SHFEGLITT True PC9_epitope_Rep1 1003.49746055903 1003.49636993586 62.482 2 0.1243849910013083 0.0015110409011298465 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 102659 16527 SQDLVYETV True PC9_epitope_Rep4 1052.50260550912 1052.5015099358602 71.543 2 0.12438130590368356 0.0015110409011298465 0.9438714419765777 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 113224 19408 TQDTPIPAL True PC9_epitope_Rep3 954.5022115862998 954.50110993586 79.878 2 0.12437738155110341 0.0015110409011298465 0.9438714419765777 ['MINDY4|p.W431*|2|0.17|ENSG00000106125|chr7:30839252-30839252|G/-|frameshift_variant', 'ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 136122 20392 YGFPSPIFL True H1975_Epitope_Rep2 1039.5378688190299 1039.53727496793 84.501 1 0.12436210107415743 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 113264 14642 TQFAEKFQEV True PC9_epitope_Rep1 1225.59790287629 1225.5968099358602 61.143 2 0.12435626538232723 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000051128|Q9NSC5-4|HOMER3', 'nc|ENSG00000051128|Q9NSC5-3|HOMER3', 'nc|ENSG00000051128|Q9NSC5-2|HOMER3', 'ENSG00000051128|ENST00000392351|HOMER3'] 59781 5944 LHAAEQESL True PC9_epitope_Rep2 996.4876241513201 996.48652993586 28.254 2 0.1243514376735345 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000518168.5_1_5:179228470-179228931:-|nuORF', 'ENST00000520134.1_1_5:179228412-179228937:-|nuORF'] 116700 20665 TYKDYVDLF True PC9_epitope_Rep3 1162.55464108198 1162.55354993586 84.761 2 0.12434415732883218 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 97625 7450 SHANSAVVL True PC9_epitope_Rep1 896.47158016436 896.47048993586 33.474 2 0.12433958156041254 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 32752 7505 GHYTEGAELVD True NCI_RA007_Epitope_Rep2 1189.5251318588498 1189.5240299358602 33.818 2 0.12433858314694897 0.0015110409011298465 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 24681 7155 FATHAAALSVR True PC9_epitope_Rep4 1142.6196413803798 1142.61799490379 34.801 3 0.1243324024797818 0.0015110409011298465 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 125479 11018 VLVDQTTGLSR True PC9_epitope_Rep3 1187.65100107831 1187.64990993586 47.371 2 0.12432665440014647 0.0015110409011298465 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 54235 21430 KYPENFFLL True PC9_epitope_Rep2 1169.61209638845 1169.61157496793 87.903 1 0.12432458319688548 0.0015110409011298465 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 47657 12571 IYPPKLHQF True PC9_epitope_Rep5 1141.62841515893 1141.62676490379 53.354 3 0.12432292578446912 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 76214 8858 NRYDGIYKV True PC9_epitope_Rep2 1126.5771078620598 1126.5760099358602 39.424 2 0.1243168667731944 0.0015110409011298465 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 17159 15711 EHAEALLL True PC9_epitope_Rep1 894.4810822188999 894.47998993586 65.255 2 0.1243158488082166 0.0015110409011298465 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 125717 8599 VNELTEFAK True H1975_Epitope_Rep1 1049.53932537101 1049.5387749679298 38.006 1 0.12431488212054209 0.0015110409011298465 0.9438714419765777 ['CON__P02769'] 103559 13588 SRDEGSLLL True PC9_epitope_Rep2 988.5189242795999 988.51782993586 57.556 2 0.12431229287599757 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000132128|Q15345-3|LRRC41', 'ENSG00000132128|ENST00000617190|LRRC41'] 32750 7103 GHYTEGAELVD True H1975_Epitope_Rep3 1189.5251318588498 1189.5240299358602 32.291 2 0.12430618403186205 0.0015110409011298465 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 123537 15456 VIIEKTYSL True PC9_epitope_Rep3 1064.61176203528 1064.6106699358602 64.604 2 0.12429339826418732 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 103656 11855 SRDPHTEFTL True PC9_epitope_Rep3 1201.57275075761 1201.57111490379 50.619 3 0.12428615309168312 0.0015110409011298465 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'COL12A1|p.Y484C|1|0.34|ENSG00000111799|chr6:75183490-75183490|T/C|missense_variant'] 14529 16934 DVANKIGII True PC9_epitope_Rep1 941.5545815123298 941.55348993586 69.96 2 0.12427578887862537 0.0015110409011298465 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 69930 18873 LYDPVISKL True PC9_epitope_Rep5 1046.6011973515801 1046.60010993586 77.614 2 0.12427422158636622 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 26635 21557 FLADPSAFVAA True PC9_epitope_Rep3 1107.5600608155898 1107.5589699358602 88.213 2 0.12426889577871954 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 76474 14150 NTDFGDEFY True H1975_Epitope_Rep2 1106.4192698079798 1106.41816993586 59.582 2 0.12426067784831413 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 113652 7765 TRDEDHIAL True PC9_epitope_Rep5 1068.51998690876 1068.5188899358602 34.811 2 0.12425679318811804 0.0015110409011298465 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 41145 19282 HYQDVSCLQF True PC9_epitope_Rep3 1238.53900810118 1238.5379099358602 79.389 2 0.12425675273433608 0.0015110409011298465 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 106323 6413 SVSAVNLPK True NCI_RA007_Epitope_Rep5 913.5232813840499 913.52218993586 31.339 2 0.12425268063658228 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1'] 105843 16287 SVISYLKKL True PC9_epitope_Rep4 1049.6484818971699 1049.64738993586 70.604 2 0.12425171985822785 0.0015110409011298465 0.9438714419765777 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6', 'ENST00000493637.6_1_X:134704384-134704540:+|nuORF', 'ENST00000504674.1_1_5:39719945-39720791:-|nuORF', 'ENSG00000165359|ENST00000639893|INTS6L'] 29594 22364 FVLDEADEML True PC9_epitope_Rep1 1180.53219138524 1180.53108993586 90.84 2 0.12424998506914492 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENST00000448133.1_1_13:61211649-61211793:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 29796 12851 FVTFDDHD True PC9_epitope_Rep5 994.40322582102 994.40212993586 54.441 2 0.12424394543111877 0.0015110409011298465 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 70343 22032 LYPQFMFHL True PC9_epitope_Rep5 1194.5895871220598 1194.58848993586 89.773 2 0.12424275321675134 0.0015110409011298465 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 96194 11721 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.4594649679301 50.225 1 0.12423719638017201 0.0015110409011298465 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 1395 14554 AEEFPNLAV True H1975_Epitope_Rep1 988.4865615221598 988.48601496793 61.187 1 0.12423429032773813 0.0015110409011298465 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 72097 15998 MRDPIRILV True PC9_epitope_Rep4 1111.65358436095 1111.65248993586 69.469 2 0.12421022608201923 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 137634 23340 YLVYILNEL True PC9_epitope_Rep2 1138.6274120994199 1138.62630993586 95.252 2 0.12420913368565945 0.0015110409011298465 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 104080 17803 SRVDDVYSVL True PC9_epitope_Rep2 1151.58225281215 1151.5811499358601 73.773 2 0.12420680489670823 0.0015110409011298465 0.9438714419765777 ['ENST00000464255.1_1_2:219265892-219269145:+|nuORF', 'nc|ENSG00000144579|Q9GZU7-3|CTDSP1', 'nc|ENSG00000144579|Q9GZU7-2|CTDSP1', 'ENSG00000144579|ENST00000273062|CTDSP1'] 43293 6742 IHDSQAPSL True PC9_epitope_Rep2 966.47705946762 966.47596993586 31.341 2 0.1241973427546709 0.0015110409011298465 0.9438714419765777 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF'] 37383 6302 GVYGSFASK True NCI_RA007_Epitope_Rep5 914.4497820906199 914.44868993586 30.919 2 0.12419523001362306 0.0015110409011298465 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 97840 11515 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 55.376 2 0.12418521493565145 0.0015110409011298465 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 88235 20816 QYEEQFVTL True PC9_epitope_Rep1 1155.5448046742697 1155.54427496793 84.897 1 0.1241784740747551 0.0015110409011298465 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 1054 9582 AEAIRILAA True H1975_Epitope_Rep1 926.5549158654999 926.55380993586 41.782 2 0.12417463022703631 0.0015110409011298465 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 133027 10330 VYVQNVVKL True NCI_RA007_Epitope_Rep3 1060.6280808057597 1060.6269899358601 47.697 2 0.12417403992995475 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 6772 5808 AQEVPGPAA True H1975_Epitope_Rep3 838.4184819623398 838.41793496793 27.363 1 0.12416536482749652 0.0015110409011298465 0.9438714419765777 ['ENSG00000146278|ENST00000336032|PNRC1'] 93452 8838 RSDTPLIY True H1975_Epitope_Rep2 963.5025459394699 963.50144993586 38.962 2 0.12416210527077758 0.0015110409011298465 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 7295 7459 ARPSSTITY True PC9_epitope_Rep5 994.5083595959 994.50726993586 33.645 2 0.12415828243005239 0.0015110409011298465 0.9438714419765777 ['ENSG00000159596|ENST00000372025|TMEM69'] 138526 13904 YRLLPGPSA True PC9_epitope_Rep2 972.5392658013599 972.53816993586 58.761 2 0.12415056469901826 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 21622 12295 ERSPVIQTL True PC9_epitope_Rep5 1041.58185888933 1041.5807699358602 52.283 2 0.12414360520106003 0.0015110409011298465 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.G10576W|1|0.15|ENSG00000181143|chr19:8939229-8939229|C/A|missense_variant'] 6916 21413 AQLDPSLVAFL True PC9_epitope_Rep6 1172.6441247927198 1172.64302993586 95.239 2 0.12412903191476922 0.0015110409011298465 0.9438714419765777 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1'] 65011 13230 LSDIGLEY True H1975_Epitope_Rep2 908.44911338428 908.4485649679301 56.017 1 0.1241277920723969 0.0015110409011298465 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 59 12732 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 54.076 1 0.12412517461199206 0.0015110409011298465 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 108389 10325 TEDWDQPVA True H1975_Epitope_Rep3 1059.45090428943 1059.44980993586 44.767 2 0.12412242986726943 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 2728 8636 AETSPAPIP True H1975_Epitope_Rep2 881.44944773745 881.4488949679301 38.176 1 0.12412168400435711 0.0015110409011298465 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 53858 18907 KYGSVIQLL True PC9_epitope_Rep4 1019.60153170475 1019.60042993586 80.812 2 0.12411900503585704 0.0015110409011298465 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D181Tfs*3|1|0.61|ENSG00000096433|chr6:33659029-33659029|G/-|frameshift_variant'] 3244 5405 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 26.185 2 0.12411514395023325 0.0015110409011298465 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 2231 7511 AENVAVPEA True NCI_RA007_Epitope_Rep3 898.4396113297399 898.43850993586 36.67 2 0.1241143827412311 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 140340 19230 YYEHEFVEL True PC9_epitope_Rep3 1227.5448046742697 1227.54370993586 79.188 2 0.12411208447615206 0.0015110409011298465 0.9438714419765777 ['ATP9B|p.T1064Rfs*5|1|0.1|ENSG00000166377|chr18:79374017-79374017|A/-|frameshift_variant', 'nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 1010 6349 AEAEPPSEV True H1975_Epitope_Rep3 927.41854153199 927.4179949679301 29.413 1 0.12410094931241927 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 103515 7677 SRDASAVSL True PC9_epitope_Rep3 904.4614094034799 904.46030993586 34.527 2 0.12410032696461108 0.0015110409011298465 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 6727 10472 AQDEPAESL True PC9_epitope_Rep5 958.4243551884199 958.42324993586 45.266 2 0.1240999960870627 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000141582|O00257-3|CBX4', 'ENSG00000141582|ENST00000269397|CBX4'] 14083 17892 DSDPFSSFY True H1975_Epitope_Rep2 1063.41345615155 1063.4123499358602 74.142 2 0.12409692686204948 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF', 'ENST00000496688.1_1_9:123589031-123593637:-|nuORF', 'PSMD5|p.L270V|1|0.16|ENSG00000095261|chr9:120826771-120826771|G/C|missense_variant'] 96662 11112 SENPSVYVP True NCI_RA007_Epitope_Rep1 990.4658260775799 990.46472993586 47.223 2 0.12409284718316495 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 104330 13221 SSEQTFMYY True H1975_Epitope_Rep1 1154.4590264449798 1154.45847496793 55.951 1 0.1240927021238596 0.0015110409011298465 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 8096 12966 ATELQSMMY True H1975_Epitope_Rep3 1072.45691827 1072.45582993586 55.106 2 0.12408918569913371 0.0015110409011298465 0.9438714419765777 ['ENSG00000196284|ENST00000371459|SUPT3H'] 96174 13333 SEEFPSFGA True H1975_Epitope_Rep3 969.4079768482899 969.4074249679301 56.546 1 0.12408644149997503 0.0015110409011298465 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 123362 17366 VIAEILRGV True PC9_epitope_Rep6 968.6018660579199 968.60076993586 79.413 2 0.12408440001403483 0.0015110409011298465 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 27450 9842 FNPFVTSDR True NCI_RA007_Epitope_Rep3 1081.51925863277 1081.5181699358602 45.785 2 0.12408144727422664 0.0015110409011298465 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 106480 16400 SVVGSNQLIEA True PC9_epitope_Rep2 1115.58225281215 1115.5811499358601 68.327 2 0.12407989897348767 0.0015110409011298465 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 69837 13899 LYADVGGKQF True PC9_epitope_Rep3 1096.55530978832 1096.5542099358602 58.545 2 0.12407771517618423 0.0015110409011298465 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 11790 16171 DHIQITAL True PC9_epitope_Rep5 909.49198125577 909.49088993586 67.191 2 0.12406625749611219 0.0015110409011298465 0.9438714419765777 ['ENSG00000089723|ENST00000203664|OTUB2'] 69043 17042 LVIDAVREI True PC9_epitope_Rep6 1026.6073453611798 1026.6062499358602 78.11 2 0.12406359371101541 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 88664 6695 RAYADEVAV True NCI_RA007_Epitope_Rep3 992.4927095317598 992.49160993586 33.417 2 0.1240573543065781 0.0015110409011298465 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 76465 15554 NTDDWENFAY True H1975_Epitope_Rep3 1273.48874635013 1273.4876499358602 65.247 2 0.12405240616676538 0.0015110409011298465 0.9438714419765777 ['ENSG00000143669|ENST00000389793|LYST'] 2888 10827 AEYSNTWTP True H1975_Epitope_Rep2 1067.45598966987 1067.4554749679298 46.675 1 0.12404665003762473 0.0015110409011298465 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 105374 7979 STYRDFQQA True PC9_epitope_Rep5 1114.50433684462 1114.5032299358602 35.63 2 0.12402160491160981 0.0015110409011298465 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 86812 16724 QRPAVIGDVL True PC9_epitope_Rep5 1066.61349337078 1066.6123899358602 69.335 2 0.1240211977911936 0.0015110409011298465 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000463545.1_1_3:154070629-154071064:-|nuORF'] 87531 10816 QTHSVFVNV True PC9_epitope_Rep6 1029.5243440132099 1029.5232499358601 52.452 2 0.12401413396762136 0.0015110409011298465 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 107045 21863 SYLPISPTF True PC9_epitope_Rep5 1023.52769805815 1023.5271749679301 89.132 1 0.12400971398140374 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 68703 13701 LVDDPLEY True H1975_Epitope_Rep2 962.4596780679799 962.45912496793 57.844 1 0.12400881576889924 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 96199 7828 SEEGNTMVP True H1975_Epitope_Rep3 962.40151156886 962.40040993586 35.089 2 0.12400464257557745 0.0015110409011298465 0.9438714419765777 ['ENSG00000135587|ENST00000258052|SMPD2'] 421 19920 AALPNVYEV True PC9_epitope_Rep5 974.5072969667399 974.50618993586 81.677 2 0.12400213738325766 0.0015110409011298465 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 89491 5150 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.6352499358602 24.886 2 0.12400172192406435 0.0015110409011298465 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 6317 6529 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 30.141 2 0.12400070172271897 0.0015110409011298465 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 52597 14427 KPYNVYITV True PC9_epitope_Rep6 1095.59644632431 1095.5953499358602 67.387 2 0.12399637740941469 0.0015110409011298465 0.9438714419765777 ['ENST00000585750.1_1_18:61011618-61022465:-|nuORF', 'ENST00000586791.5_1_18:60999017-61011732:-|nuORF', 'nc|ENSG00000119537|Q06136-2|KDSR', 'ENSG00000119537|ENST00000645214|KDSR'] 126508 13654 VPNKFLVTA True PC9_epitope_Rep5 987.5753169569099 987.57420993586 57.543 2 0.12399335759026675 0.0015110409011298465 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 129424 10793 VTEIM[Oxidation]SMGY True H1975_Epitope_Rep2 1045.44601961357 1045.44492993586 46.543 2 0.1239787462773286 0.0015110409011298465 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 27518 18283 FPFAPPAAA True PC9_epitope_Rep6 887.4541391950698 887.45359496793 82.969 1 0.12397548210660685 0.0015110409011298465 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 17312 12743 EHDPQYAVI True PC9_epitope_Rep3 1070.50327421546 1070.5021699358601 54.037 2 0.12397456664723212 0.0015110409011298465 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 94682 13356 RYLEKPMEI True PC9_epitope_Rep3 1177.6165301458898 1177.61488490379 56.407 3 0.12397317735509675 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 131561 19492 VVVPTLDTV True PC9_epitope_Rep4 941.5433481222899 941.54224993586 83.092 2 0.12396999661825517 0.0015110409011298465 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 4082 19686 AHSNEILIF True PC9_epitope_Rep1 1042.54474510462 1042.54364993586 80.546 2 0.12396854066716934 0.0015110409011298465 0.9438714419765777 ['ENST00000554115.5_1_14:50249154-50249313:+|nuORF', 'ENSG00000165516|ENST00000298307|KLHDC2'] 4424 21563 AIVDLIHDI True PC9_epitope_Rep3 1007.5651461960299 1007.56404993586 88.237 2 0.12395784957862056 0.0015110409011298465 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 105288 16528 STTNGGILTV True PC9_epitope_Rep1 961.50802524273 961.50692993586 68.398 2 0.12395685341844227 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 54121 16851 KYMPNVKVAVF True PC9_epitope_Rep5 1294.7107648838999 1294.7096699358601 69.826 2 0.12395430339232469 0.0015110409011298465 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 96372 4726 SEGQRPQLTAA True H1975_Epitope_Rep2 1156.58364979448 1156.58254993586 23.272 2 0.12394438992013324 0.0015110409011298465 0.9438714419765777 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 73543 21867 NFLPPIIARF True PC9_epitope_Rep2 1186.6862643882198 1186.6851699358601 89.587 2 0.1239441899298274 0.0015110409011298465 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 118702 2755 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 14.681 2 0.12392548910414158 0.0015110409011298465 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 91608 20359 RPDSFVLIL True PC9_epitope_Rep4 1058.61243074162 1058.61132993586 86.453 2 0.12391737553586742 0.0015110409011298465 0.9438714419765777 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 72262 19698 MSDLLSPLLY True H1975_Epitope_Rep1 1150.59439771898 1150.5938749679299 81.993 1 0.12391441250307911 0.0015110409011298465 0.9438714419765777 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 105550 7657 SVDPTQTEY True H1975_Epitope_Rep3 1038.45056993626 1038.4494699358602 34.434 2 0.12390978032720175 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 28846 10204 FTDPGQVAY True H1975_Epitope_Rep1 996.4552613938799 996.45416993586 44.19 2 0.12390654998820674 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 4023 13628 AHLDATTVL True PC9_epitope_Rep1 939.5025459394701 939.50144993586 57.276 2 0.12390098105720519 0.0015110409011298465 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 46747 19189 IVAPGTFEV True PC9_epitope_Rep4 931.5014833103099 931.5009349679301 81.91 1 0.12390006201505278 0.0015110409011298465 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 57462 10284 LEIVNPQAA True H1975_Epitope_Rep2 953.51819600361 953.51708993586 44.565 2 0.12388838236787719 0.0015110409011298465 0.9438714419765777 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 47542 17305 IYLRDPVQV True PC9_epitope_Rep5 1101.61824439805 1101.6171499358602 71.568 2 0.12387629243101285 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000134900|P29144|TPP2', 'ENSG00000134900|ENST00000376052|TPP2'] 118776 6440 VEDYSQNVA True H1975_Epitope_Rep2 1023.4509042894298 1023.4498099358599 29.691 2 0.12386523406712671 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6'] 34948 19235 GQWSQGLISA True PC9_epitope_Rep2 1045.5192586327698 1045.5181699358602 79.361 2 0.12386491786248043 0.0015110409011298465 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 2447 4269 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 21.534 2 0.12385875046411225 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 9633 21583 AYGGAFYAF True PC9_epitope_Rep5 965.42831837005 965.4277649679301 88.059 1 0.12385829502472726 0.0015110409011298465 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 6292 7045 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 31.906 2 0.12385709169746854 0.0015110409011298465 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 96232 4919 SEEPETPAA True H1975_Epitope_Rep3 929.3978060874099 929.39725496793 24.049 1 0.12385561167654625 0.0015110409011298465 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 25377 10740 FEIGGTIHP True H1975_Epitope_Rep2 969.49198125577 969.49088993586 46.338 2 0.12384983436629055 0.0015110409011298465 0.9438714419765777 ['ENSG00000138678|ENST00000264409|GPAT3'] 88610 16322 RALTVPEL True PC9_epitope_Rep1 897.5283667644899 897.52726993586 67.601 2 0.1238482753114156 0.0015110409011298465 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 104026 13580 SRSPEYLSL True PC9_epitope_Rep4 1050.53457434374 1050.53346993586 60.13 2 0.12384766740531306 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3', 'ENST00000484081.1_1_2:225370642-225376119:-|nuORF'] 86357 14006 QQLEPVTGQV True PC9_epitope_Rep1 1097.57168812845 1097.5705899358602 58.711 2 0.12384602506168464 0.0015110409011298465 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 109609 18607 THDGGFLSL True PC9_epitope_Rep1 945.45559574705 945.45448993586 76.359 2 0.12382968149463712 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 17432 12141 EHFPQAYSV True PC9_epitope_Rep4 1076.49270953176 1076.4916099358602 54.515 2 0.12382541708784645 0.0015110409011298465 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 140323 10505 YYEEQHPEL True PC9_epitope_Rep2 1206.5193182024198 1206.51822993586 45.728 2 0.1238250617065583 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 38160 5083 HERPEFIA True NCI_RA007_Epitope_Rep3 997.4981292653698 997.49702993586 26.987 2 0.12381349057499111 0.0015110409011298465 0.9438714419765777 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 53302 8131 KTLTGKTITL True PC9_epitope_Rep2 1074.6648602373 1074.66376993586 36.633 2 0.1238110068180015 0.0015110409011298465 0.9438714419765777 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF', 'ENSG00000150991|ENST00000339647|UBC', 'ENST00000578649.1_1_17:16284470-16285908:+|nuORF', 'UBC|p.E642Gfs*6|1|0.15|ENSG00000150991|chr12:124911849-124911850|-/T|frameshift_variant', 'ENSG00000170315|ENST00000302182|UBB', 'ENST00000584755.1_1_17:21731300-21731612:+|nuORF', 'ENST00000495843.1_1_2:55459960-55461412:+|nuORF', 'ENST00000584755.1_1_17:21730896-21731370:+|nuORF', 'ENST00000445497.1_1_2:149621139-149621370:-|nuORF', 'ENST00000453803.2_1_20:35677668-35677815:+|nuORF', 'ENST00000598814.1_1_19:18682694-18684218:+|nuORF', 'ENST00000471772.6_1_2:55459960-55460558:+|nuORF', 'ENST00000463185.1_1_2:55459960-55460026:+|nuORF', 'ENSG00000221983|ENST00000442744|UBA52'] 116486 11281 TYDKGYQF True PC9_epitope_Rep1 1020.45526139388 1020.45416993586 48.272 2 0.1237983414739458 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 77518 17118 NYQGHFHLF True PC9_epitope_Rep5 1161.5355774032498 1161.53392490379 70.866 3 0.1237964916162013 0.0015110409011298465 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 40800 20373 HVIDLDDATFL True PC9_epitope_Rep4 1257.62411762413 1257.6230299358601 86.509 2 0.12379262823639968 0.0015110409011298465 0.9438714419765777 ['ENSG00000152219|ENST00000282032|ARL14EP'] 22156 11359 ESYSVYVYK True PC9_epitope_Rep6 1136.5389910178399 1136.5378899358602 54.734 2 0.12378578494909721 0.0015110409011298465 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 49432 21165 KILSELFTV True PC9_epitope_Rep1 1048.61684741572 1048.61574993586 86.244 2 0.1237835379588831 0.0015110409011298465 0.9438714419765777 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF'] 74031 14197 NHSDYNMVL True PC9_epitope_Rep3 1091.47059418819 1091.46948993586 59.693 2 0.1237823660564407 0.0015110409011298465 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 116889 15851 TYNYPVHYF True PC9_epitope_Rep6 1202.53965972418 1202.53856993586 73.242 2 0.12378204193036998 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 31351 11667 GEAPALVAV True H1975_Epitope_Rep3 825.45961849833 825.4590749679301 50.012 1 0.12376591278834116 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF'] 4153 12899 AHWQFETAL True NCI_RA007_Epitope_Rep4 1101.5243440132099 1101.5232499358601 56.705 2 0.1237658095032412 0.0015110409011298465 0.9438714419765777 ['ENSG00000185262|ENST00000327490|UBALD2', 'ENSG00000153443|ENST00000283474|UBALD1'] 86369 8974 QQLGKVVQV True PC9_epitope_Rep4 997.5920296502098 997.59092993586 42.071 2 0.12375843614955524 0.0015110409011298465 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 97720 14016 SHFEGLITT True PC9_epitope_Rep2 1003.49746055903 1003.49636993586 59.191 2 0.12374535386094275 0.0015110409011298465 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 73839 8813 NHEEEISTL True PC9_epitope_Rep2 1070.48801807414 1070.4869299358602 39.252 2 0.12374501908504729 0.0015110409011298465 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 7856 9313 ATALEYVYK True NCI_RA007_Epitope_Rep4 1056.54916177872 1056.5480699358602 42.679 2 0.12374308388699327 0.0015110409011298465 0.9438714419765777 ['ENSG00000135441|ENST00000548925|BLOC1S1', 'nc|ENSG00000135441|P78537-2|BLOC1S1', 'ENST00000549147.1_1_12:56113198-56113390:+|nuORF'] 34645 18972 GQISEVVVV True PC9_epitope_Rep3 928.5229470308799 928.52184993586 78.199 2 0.12373789843667017 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 76776 19958 NVDEGIYQL True PC9_epitope_Rep5 1049.5029398622898 1049.5023749679299 81.821 1 0.12373355292160934 0.0015110409011298465 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ARHGEF2|p.P672Qfs*7|2|0.14|ENSG00000116584|chr1:155952207-155952207|C/-|frameshift_variant', 'ENST00000474428.6_1_1:155922555-155932010:-|nuORF'] 69929 17671 LYDPVISKL True PC9_epitope_Rep4 1046.6011973515801 1046.60010993586 75.997 2 0.1237303178478796 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1'] 95236 8755 SADETWDSA True NCI_RA007_Epitope_Rep1 980.37231961556 980.37177496793 38.057 1 0.1237253516960156 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 104656 9613 SSYSGVTQL True H1975_Epitope_Rep3 940.4501760134401 940.44962496793 41.99 1 0.12371679698515207 0.0015110409011298465 0.9438714419765777 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 138312 18194 YRAPELML True PC9_epitope_Rep1 991.5160878286299 991.51498993586 74.774 2 0.12371638239653981 0.0015110409011298465 0.9438714419765777 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 33549 7741 GLIYEETR True NCI_RA007_Epitope_Rep1 979.49746055903 979.49636993586 34.105 2 0.12371529143956324 0.0015110409011298465 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000275663|ENST00000611444|H4C7'] 88942 7405 REDENLQVP True H1975_Epitope_Rep3 1098.53055159246 1098.5294499358602 33.461 2 0.12370235664516258 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3', 'ENST00000415511.1_1_22:30367048-30387510:+|nuORF'] 73855 18646 NHFPGSFQI True PC9_epitope_Rep1 1045.49812926537 1045.4970299358602 76.511 2 0.12369925366654343 0.0015110409011298465 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 2449 4646 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep3 1063.46042380775 1063.45932993586 22.993 2 0.12369879379977859 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 11643 11209 DHATTALL True PC9_epitope_Rep1 840.43413202648 840.43302993586 47.997 2 0.12369786034556704 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'ENST00000514280.1_1_5:79646842-79647379:-|nuORF'] 29236 14668 FVDEPLIHA True PC9_epitope_Rep6 1039.5338460677497 1039.53274993586 68.345 2 0.12368984492043238 0.0015110409011298465 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 76559 17358 NTDSLDWALY True H1975_Epitope_Rep1 1196.5349682665599 1196.53437496793 72.233 1 0.12368764792434983 0.0015110409011298465 0.9438714419765777 ['ENSG00000108561|ENST00000225698|C1QBP'] 71381 11215 MIDPSGVSY True H1975_Epitope_Rep2 967.4320834211501 967.43098993586 48.18 2 0.12368716743800802 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 1179 11586 AEDAVPTLTP True H1975_Epitope_Rep2 1012.50769088956 1012.50658993586 49.63 2 0.1236809485291119 0.0015110409011298465 0.9438714419765777 ['ENST00000415995.5_1_3:48636563-48647036:-|nuORF', 'ENSG00000010256|ENST00000203407|UQCRC1'] 32707 9176 GHSGDVMSL True PC9_epitope_Rep4 901.3963666187701 901.39526993586 42.89 2 0.12368018705549096 0.0015110409011298465 0.9438714419765777 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'GNB2|p.A181V|1|0.43|ENSG00000172354|chr7:100678142-100678142|C/T|missense_variant', 'ENSG00000114450|ENST00000232564|GNB4'] 38494 4871 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 24.103 2 0.1236763943301158 0.0015110409011298465 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 32130 14636 GEYYNVPIP True H1975_Epitope_Rep2 1050.5022115862998 1050.50110993586 61.456 2 0.12367434949970642 0.0015110409011298465 0.9438714419765777 ['ENST00000284384.6_1_17:64637544-64770230:+|nuORF', 'PRKCA|p.F498Sfs*33|1|0.54|ENSG00000154229|chr17:66742728-66742729|-/C|frameshift_variant', 'TANC2-PRKCA|1|fusion', 'ENSG00000154229|ENST00000413366|PRKCA'] 131700 18754 VWSDVTPLTF True NCI_RA007_Epitope_Rep2 1163.58627556343 1163.5851699358602 77.748 2 0.12366662092324504 0.0015110409011298465 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 38009 7325 HEIEGTGLP True H1975_Epitope_Rep2 951.4661604307499 951.46561496793 33.116 1 0.12366525423656835 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'NIBAN2|p.M44I|1|0.79|ENSG00000136830|chr9:127531702-127531702|C/T|missense_variant'] 74797 20089 NLNPEFISV True PC9_epitope_Rep4 1031.5287606873098 1031.52817496793 85.404 1 0.12365124123361666 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 40289 10692 HRQEIQVVL True PC9_epitope_Rep2 1120.63529144452 1120.6341899358601 46.439 2 0.1236498220848215 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 134886 14852 YADGESFLGY True H1975_Epitope_Rep2 1120.4713053808398 1120.4707749679299 62.282 1 0.12364891731934761 0.0015110409011298465 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 109611 18732 THDGGFLSL True PC9_epitope_Rep3 945.45559574705 945.45448993586 77.276 2 0.12364809562969718 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 84078 6500 QEQEGGPAVP True H1975_Epitope_Rep2 1010.4668887067396 1010.46578993586 29.918 2 0.1236456852951521 0.0015110409011298465 0.9438714419765777 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 62127 20015 LLPDLIQKV True PC9_epitope_Rep3 1037.6484818971699 1037.64738993586 82.235 2 0.12364479110159438 0.0015110409011298465 0.9438714419765777 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF'] 75644 21294 NQSELAVLL True PC9_epitope_Rep2 985.5444107514498 985.5438649679301 87.37 1 0.12363365675975886 0.0015110409011298465 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 1004 8712 AEAEPPLPA True H1975_Epitope_Rep2 893.4494477374499 893.4488949679301 38.471 1 0.12363182696062838 0.0015110409011298465 0.9438714419765777 ['ENST00000532687.5_1_11:33061130-33065300:+|nuORF'] 34557 20534 GQFGVGFYSA True PC9_epitope_Rep3 1031.4712458111896 1031.4706749679299 84.247 1 0.1236314650259781 0.0015110409011298465 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 55046 23329 LALFPGVAL True PC9_epitope_Rep3 899.5480395799099 899.5474949679301 95.014 1 0.12362186082330207 0.0015110409011298465 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 26395 12706 FIIYDTHSL True NCI_RA007_Epitope_Rep5 1107.56006081559 1107.5589699358602 55.537 2 0.12362180815963347 0.0015110409011298465 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'ENST00000539652.1_1_12:66522892-66539669:-|nuORF'] 90849 4716 RKVSINNTGL True NCI_RA007_Epitope_Rep5 1100.63020606408 1100.62910993586 24.825 2 0.12361609159970385 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF'] 113183 12068 TQDGTPITV True PC9_epitope_Rep4 930.4658260775799 930.46472993586 54.226 2 0.12360476336197769 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 94562 15816 RYIPTAAAF True PC9_epitope_Rep1 1008.5392658013599 1008.53816993586 65.648 2 0.12360068190680241 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 88300 13601 QYKDVPITY True PC9_epitope_Rep1 1125.57062549929 1125.5695299358601 57.172 2 0.12359124018898572 0.0015110409011298465 0.9438714419765777 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 2122 5676 AELQSRLAA True NCI_RA007_Epitope_Rep3 957.5243440132099 957.52324993586 29.309 2 0.12358979054824429 0.0015110409011298465 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 1056 9815 AEAIRILAA True H1975_Epitope_Rep1 926.5549158654999 926.55380993586 42.682 2 0.12358534998591197 0.0015110409011298465 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 61159 10561 LLDIRSEY True H1975_Epitope_Rep1 1007.5287606873101 1007.52766993586 45.575 2 0.12357711055732615 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 62158 15748 LLPGKTYSF True PC9_epitope_Rep3 1024.5593325395998 1024.55822993586 65.731 2 0.12357588032376696 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 11434 9395 DFQVNLNNASR True H1975_Epitope_Rep1 1276.61601255192 1276.6149099358602 41.049 2 0.12357178336846004 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 112944 10397 TPRPVIVEP True PC9_epitope_Rep4 1006.5811306133398 1006.58002993586 47.695 2 0.12357163007848264 0.0015110409011298465 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 2191 11773 AENELGVVVA True H1975_Epitope_Rep3 999.5236753068698 999.52256993586 50.429 2 0.12356882286171553 0.0015110409011298465 0.9438714419765777 ['ENSG00000171311|ENST00000370902|EXOSC1'] 72276 14428 MSDSYLPSYY True H1975_Epitope_Rep2 1224.5008912569601 1224.50037496793 60.65 1 0.12356673115912963 0.0015110409011298465 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 115631 23515 TVISLLTGL True PC9_epitope_Rep1 915.56408356687 915.5635349679301 95.237 1 0.1235664360796592 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 6443 7191 APSPATAAATA True PC9_epitope_Rep1 927.4661604307499 927.46506993586 32.473 2 0.1235537515187413 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 84291 8237 QEYSEFVKA True NCI_RA007_Epitope_Rep4 1099.5185899264297 1099.51748993586 38.479 2 0.12354764296903208 0.0015110409011298465 0.9438714419765777 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 43404 8441 IHSEPLGV True PC9_epitope_Rep4 850.45486747106 850.45376993586 39.934 2 0.12354460316749491 0.0015110409011298465 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 47626 20519 IYPEVVHMF True PC9_epitope_Rep3 1133.5579526406098 1133.55684993586 84.187 2 0.12354018534637874 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 35757 8763 GTVDVTPFIKK True NCI_RA007_Epitope_Rep4 1203.68632395787 1203.68467490379 40.504 3 0.12353758301428171 0.0015110409011298465 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 72566 23109 MVLHIPDIFL True PC9_epitope_Rep1 1196.66275206232 1196.6616499358602 93.691 2 0.12352020410524955 0.0015110409011298465 0.9438714419765777 ['ENST00000462685.1_1_2:74159806-74173970:+|nuORF', 'nc|ENSG00000114956|Q16854-6|DGUOK'] 96204 11772 SEEILTVAA True H1975_Epitope_Rep2 931.4862271689899 931.4856749679301 50.355 1 0.12350902609124403 0.0015110409011298465 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 37 17334 AAAAVIPTV True PC9_epitope_Rep3 811.48035394291 811.47924993586 71.849 2 0.12350396375361077 0.0015110409011298465 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 86147 8761 QPRYPVNSV True PC9_epitope_Rep5 1058.55089311422 1058.5497899358602 38.641 2 0.12350371020333581 0.0015110409011298465 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 119777 5930 VEVANPPA True H1975_Epitope_Rep2 795.4126683059098 795.41156993586 27.794 2 0.12349938749355058 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 87521 13017 QTHSVFVNV True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 54.94 2 0.12349551567348432 0.0015110409011298465 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 109214 18750 TFTFSHATF True PC9_epitope_Rep3 1057.4868958753298 1057.48578993586 77.343 2 0.12349088520121775 0.0015110409011298465 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 21313 14260 ERISQSGDFL True PC9_epitope_Rep5 1150.56185172074 1150.56074993586 59.855 2 0.12347476016206377 0.0015110409011298465 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000489038.5_1_7:33016023-33032371:+|nuORF', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 109862 13332 THMPSVVGV True PC9_epitope_Rep1 925.4691376362099 925.46804993586 56.14 2 0.12347074078628037 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 115456 9034 TVFSHAQTV True PC9_epitope_Rep1 988.4977949121999 988.49668993586 39.599 2 0.12346300161223395 0.0015110409011298465 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 13187 17710 DLTDYLM[Oxidation]K True PC9_epitope_Rep3 1013.47394861357 1013.47284993586 73.319 2 0.12346286464105191 0.0015110409011298465 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 109687 17268 THEPNFTII True PC9_epitope_Rep2 1070.53965972418 1070.53856993586 71.68 2 0.1234611764437267 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 35495 8756 GTFLEGVAK True NCI_RA007_Epitope_Rep5 920.4967322830398 920.49562993586 40.346 2 0.12343384950005347 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11', 'ENST00000593233.1_1_19:5894755-5901370:-|nuORF', 'ENSG00000174886|ENST00000308961|NDUFA11'] 116158 12406 TVTETTVTV True PC9_epitope_Rep1 949.49679185269 949.49568993586 52.581 2 0.1234180264288461 0.0015110409011298465 0.9438714419765777 ['ENST00000376769.6_1_6:30035187-30036127:+|nuORF', 'ENSG00000204619|ENST00000376772|PPP1R11'] 117402 9631 VADGYPVRL True NCI_RA007_Epitope_Rep4 988.5341804209199 988.53308993586 43.895 2 0.12341771347831491 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 7557 18531 ASFNDTFVHV True PC9_epitope_Rep5 1135.5298233164701 1135.5287299358602 76.302 2 0.12341730055512962 0.0015110409011298465 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 73248 7157 NEIDAEPPA True H1975_Epitope_Rep2 954.42944056886 954.4288949679301 32.463 1 0.12341689634870998 0.0015110409011298465 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 31972 8410 GESSLILKA True NCI_RA007_Epitope_Rep4 916.52294703088 916.52184993586 39.163 2 0.12341643436021178 0.0015110409011298465 0.9438714419765777 ['ENSG00000139567|ENST00000388922|ACVRL1'] 133042 19988 VYVSDIQEL True PC9_epitope_Rep5 1064.5389910178399 1064.5378899358602 81.937 2 0.12341610472452028 0.0015110409011298465 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 129906 5947 VTLTSEEEAR True PC9_epitope_Rep2 1133.5564319871298 1133.55532993586 28.266 2 0.1234013887160921 0.0015110409011298465 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 52294 8762 KPAEFTVDA True PC9_epitope_Rep4 976.4865615221598 976.48546993586 41.21 2 0.1233990199634302 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 3948 15532 AHDVDPIEL True PC9_epitope_Rep1 1007.4923751785899 1007.49126993586 64.569 2 0.12339854507690191 0.0015110409011298465 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 49310 7959 KHTEMITTL True PC9_epitope_Rep4 1072.5586809166 1072.55758993586 38.058 2 0.1233963093118476 0.0015110409011298465 0.9438714419765777 ['ENSG00000164985|ENST00000380733|PSIP1'] 84977 9837 QIDPTIQRV True PC9_epitope_Rep4 1068.5927579262 1068.5916699358602 45.487 2 0.12339145969851592 0.0015110409011298465 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q922U2'] 37739 11151 HAVGDIPGV True PC9_epitope_Rep2 863.45011644379 863.44900993586 48.219 2 0.12338537605632077 0.0015110409011298465 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 5470 11553 AMDPVSVSY True H1975_Epitope_Rep2 967.4320834211501 967.43153496793 49.5 1 0.12337441080453139 0.0015110409011298465 0.9438714419765777 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3', 'KLF3|p.V36Sfs*31|1|0.12|ENSG00000109787|chr4:38688630-38688630|G/-|frameshift_variant'] 57176 5422 LEERYVPRA True H1975_Epitope_Rep3 1131.6036569630699 1131.6020249037902 25.915 3 0.12337317382218135 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 105471 6445 SVASPFTSK True NCI_RA007_Epitope_Rep4 922.4759968384601 922.47488993586 31.39 2 0.12337071573967426 0.0015110409011298465 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4', 'ENSG00000187527|ENST00000342358|ATP13A5'] 17526 10499 EHINEGETAML True PC9_epitope_Rep6 1242.55505208814 1242.5539499358601 51.163 2 0.12336967295586523 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 98260 7549 SIFDGRVVAK True NCI_RA007_Epitope_Rep5 1090.61349337078 1090.6123899358602 35.724 2 0.12336686668988928 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 123127 12314 VHDESAFVV True PC9_epitope_Rep2 1001.4818104948898 1001.48070993586 52.678 2 0.12336665856779423 0.0015110409011298465 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 38250 14179 HEYPWILSA True NCI_RA007_Epitope_Rep4 1114.54474510462 1114.54364993586 61.82 2 0.12336607134783115 0.0015110409011298465 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF'] 138109 10226 YQHENVVEM True PC9_epitope_Rep5 1147.4968089360298 1147.49570993586 44.323 2 0.1233656735756825 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 11977 20209 DHTVGFIL True PC9_epitope_Rep5 900.4705175351999 900.46942993586 82.78 2 0.1233654442862428 0.0015110409011298465 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 6285 6100 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 28.278 2 0.1233599391488898 0.0015110409011298465 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 111041 15490 TLDPQTGLFY True H1975_Epitope_Rep3 1153.5655401188499 1153.56444993586 64.999 2 0.12335978144376644 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 116573 13265 TYGEIFEKF True NCI_RA007_Epitope_Rep3 1132.54407639828 1132.5429699358601 59.452 2 0.12334814373960777 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 130755 11463 VVDPNQVNV True PC9_epitope_Rep4 982.5083595959001 982.50726993586 51.855 2 0.12333923959435708 0.0015110409011298465 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 113435 13042 TQNEVAAAL True PC9_epitope_Rep1 915.4661604307498 915.46561496793 55.035 1 0.1233342252214106 0.0015110409011298465 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 27287 23499 FLYPFPLAL True PC9_epitope_Rep4 1079.60555445603 1079.60497496793 98.692 1 0.12332988114523692 0.0015110409011298465 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 4409 13421 AIVDKVPSV True PC9_epitope_Rep1 926.54368247546 926.54258993586 56.486 2 0.12332820898859488 0.0015110409011298465 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 97819 12031 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 54.08 2 0.12332670332260368 0.0015110409011298465 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 120263 15879 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 66.334 2 0.12332469063874342 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 60075 19172 LHSLPIVSM True PC9_epitope_Rep1 995.54738795691 995.54628993586 78.539 2 0.12331904520149234 0.0015110409011298465 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 8856 13901 AVFPSIVGRPR True PC9_epitope_Rep1 1197.69822605425 1197.6971299358602 58.307 2 0.12331581851444769 0.0015110409011298465 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 52300 12739 KPANLLISA True PC9_epitope_Rep5 925.55966689277 925.55856993586 54.007 2 0.12330566752308113 0.0015110409011298465 0.9438714419765777 ['ENST00000459720.5_1_9:90585689-90589466:-|nuORF', 'nc|ENSG00000156345|Q8IZL9-2|CDK20', 'nc|ENSG00000156345|Q8IZL9-3|CDK20', 'nc|ENSG00000156345|Q8IZL9-5|CDK20', 'nc|ENSG00000156345|Q8IZL9-4|CDK20', 'ENSG00000156345|ENST00000325303|CDK20'] 127008 7349 VPYEIQKGQA True PC9_epitope_Rep2 1131.59242357303 1131.5913299358601 33.648 2 0.12329262652125797 0.0015110409011298465 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 40455 9777 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46506993586 42.595 2 0.12329203405781439 0.0015110409011298465 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 70923 14939 MELITPISA True H1975_Epitope_Rep1 973.5154191222899 973.51487496793 62.701 1 0.12328778429475676 0.0015110409011298465 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 96068 6904 SECGKTFTV True H1975_Epitope_Rep2 970.44298245802 970.44188993586 31.476 2 0.12328251300816119 0.0015110409011298465 0.9438714419765777 ['ZNF160|p.V321Sfs*36|1|0.4|ENSG00000170949|chr19:53069573-53069573|C/-|frameshift_variant', 'ZNF160|p.A769Pfs*4|1|0.29|ENSG00000170949|chr19:53068233-53068233|C/-|frameshift_variant', 'ENSG00000170949|ENST00000683776|ZNF160'] 88839 5287 RDYVAPTA True NCI_RA007_Epitope_Rep2 891.4450310633499 891.44392993586 25.187 2 0.1232789087653484 0.0015110409011298465 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 98080 3927 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 21.301 2 0.1232784362054572 0.0015110409011298465 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 6343 6634 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 30.491 2 0.12327344215876541 0.0015110409011298465 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 53202 11453 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep1 1213.59004099497 1213.58894993586 49.034 2 0.12325974911124866 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 136548 13888 YHSEVPVSL True PC9_epitope_Rep2 1029.51311062317 1029.51257496793 58.701 1 0.1232532052137456 0.0015110409011298465 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 27636 19318 FQAEIAQLM True PC9_epitope_Rep6 1049.52156713189 1049.52046993586 86.955 2 0.12324937470870342 0.0015110409011298465 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 123122 18334 VHDEGVWAL True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 75.536 2 0.12323243434721819 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 73876 13889 NHHLFTTTI True PC9_epitope_Rep3 1082.5508931142201 1082.5497899358602 58.503 2 0.12322882662446884 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 96324 11232 SEEVTPIAV True H1975_Epitope_Rep3 943.4862271689899 943.48512993586 48.306 2 0.1232243896423832 0.0015110409011298465 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 84294 15244 QEYVTFLGA True H1975_Epitope_Rep2 1026.5022115862998 1026.50110993586 63.794 2 0.12322142638803056 0.0015110409011298465 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 38 16311 AAAAVIPTV True PC9_epitope_Rep4 811.48035394291 811.47924993586 70.701 2 0.12321969987760426 0.0015110409011298465 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 3246 5589 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 26.886 2 0.12321928373912094 0.0015110409011298465 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 95238 8151 SADETWDSA True NCI_RA007_Epitope_Rep2 980.37231961556 980.37122993586 36.34 2 0.12321658246691132 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 4125 14942 AHTPVIISV True PC9_epitope_Rep1 935.54401682863 935.54290993586 62.297 2 0.12321556071716327 0.0015110409011298465 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 26071 8876 FHDSAVTSV True PC9_epitope_Rep3 961.45051036661 961.44940993586 39.092 2 0.12321490212489912 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 6293 7300 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 32.893 2 0.12321469255779743 0.0015110409011298465 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 35662 8465 GTMTGMLYK True NCI_RA007_Epitope_Rep5 1000.47217441132 1000.47106993586 39.243 2 0.12321264608883957 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 62161 15641 LLPGKTYSF True PC9_epitope_Rep5 1024.5593325395998 1024.55822993586 65.175 2 0.12321092721917229 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 83861 6850 QEHENIIVA True NCI_RA007_Epitope_Rep4 1051.52982331647 1051.5287299358602 32.97 2 0.12320870233610266 0.0015110409011298465 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 18744 8627 ELDPDNETY True H1975_Epitope_Rep1 1094.44039917538 1094.4393099358601 38.11 2 0.12320653255707133 0.0015110409011298465 0.9438714419765777 ['ENSG00000104969|ENST00000221566|SGTA'] 88205 14593 QYAPSTAQF True PC9_epitope_Rep1 1011.4661604307499 1011.46506993586 60.955 2 0.12320386633219586 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 114295 8502 TSALPIIQK True NCI_RA007_Epitope_Rep4 969.58588164061 969.5853349679301 39.503 1 0.12320326294634798 0.0015110409011298465 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 86636 8728 QRELGGTAL True PC9_epitope_Rep5 943.5086939490698 943.50758993586 38.514 2 0.12320102439878149 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000198026|Q9H4Z2-2|ZNF335', 'ENSG00000198026|ENST00000322927|ZNF335'] 35494 8811 GTFLEGVAK True NCI_RA007_Epitope_Rep4 920.4967322830398 920.49562993586 40.701 2 0.12318724640020064 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11', 'ENST00000593233.1_1_19:5894755-5901370:-|nuORF', 'ENSG00000174886|ENST00000308961|NDUFA11'] 124623 7840 VLIAAHGNSLR True PC9_epitope_Rep3 1149.66184054553 1149.66019490379 35.145 3 0.12318717921443179 0.0015110409011298465 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 117319 6687 VAAKEVVL True H1975_Epitope_Rep3 827.5116540711899 827.51054993586 30.676 2 0.1231823828466586 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 94919 13072 RYPDRITLI True PC9_epitope_Rep6 1145.65569253593 1145.65405490379 61.888 3 0.12318070980273157 0.0015110409011298465 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 133273 12356 WEIENNPTV True H1975_Epitope_Rep2 1100.51383889916 1100.51274993586 52.612 2 0.1231783508818526 0.0015110409011298465 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 38885 18622 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 76.655 2 0.12316945622621321 0.0015110409011298465 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 132062 16482 VYIHPSSALF True PC9_epitope_Rep6 1132.59169529704 1132.5905899358602 75.823 2 0.12316752214708773 0.0015110409011298465 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8'] 102867 16126 SQHGVIIQL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 67.177 2 0.12316130973438649 0.0015110409011298465 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 86152 10546 QPSEVLRTV True PC9_epitope_Rep3 1027.56620882519 1027.5651099358602 45.51 2 0.12316120797786469 0.0015110409011298465 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 113077 22431 TPYGYFLISA True PC9_epitope_Rep5 1130.5648118428599 1130.56370993586 91.279 2 0.12315897054048673 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 21097 6689 ERDPHEEIL True PC9_epitope_Rep2 1136.5462016566 1136.5445549037902 31.137 3 0.1231468195846068 0.0015110409011298465 0.9438714419765777 ['ENSG00000153140|ENST00000283122|CETN3'] 105992 14312 SVLKSIQEV True PC9_epitope_Rep3 1001.57571087973 1001.5746099358599 60.138 2 0.12314661014299798 0.0015110409011298465 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 47459 19797 IYIWDLNNF True NCI_RA007_Epitope_Rep3 1196.5866099165999 1196.58550993586 86.277 2 0.12314131176544589 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 31330 11164 GEAIPALAA True H1975_Epitope_Rep1 811.44396843419 811.44341496793 47.91 1 0.1231377559330915 0.0015110409011298465 0.9438714419765777 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 94569 15699 RYIPTAAAF True PC9_epitope_Rep5 1008.5392658013599 1008.53816993586 65.395 2 0.12313626675646429 0.0015110409011298465 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 85435 15687 QLEWDDSTLSY True H1975_Epitope_Rep1 1355.58812603823 1355.58702993586 65.629 2 0.12313161602562492 0.0015435274747890512 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 86645 8374 QRFEGTTSL True PC9_epitope_Rep4 1037.5141732523298 1037.5130699358601 39.668 2 0.12312175204548924 0.0015435274747890512 0.9438714419765777 ['ENSG00000151502|ENST00000281187|VPS26B'] 4251 23258 AIIEYMPLL True PC9_epitope_Rep2 1061.5831047592899 1061.58257496793 94.947 1 0.12311517069331021 0.0015435274747890512 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 31100 17420 GAYTQVIFL True H1975_Epitope_Rep2 1010.54368247546 1010.5431749679301 72.298 1 0.12310796053761723 0.0015435274747890512 0.9438714419765777 ['ENSG00000171298|ENST00000302262|GAA'] 102656 17733 SQDLVYETV True PC9_epitope_Rep1 1052.50260550912 1052.5015099358602 73.007 2 0.12309471630397546 0.0015435274747890512 0.9438714419765777 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 132585 12793 VYPPPHQVF True PC9_epitope_Rep1 1082.5549158654999 1082.55380993586 54.083 2 0.12309219726225233 0.0015435274747890512 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 71994 8944 MQDESSQTSL True PC9_epitope_Rep1 1124.4655683774001 1124.46446993586 39.245 2 0.1230920295779573 0.0015435274747890512 0.9438714419765777 ['ENSG00000101966|ENST00000371199|XIAP'] 96498 8374 SELEAALQR True NCI_RA007_Epitope_Rep1 1015.5298233164699 1015.52872993586 36.575 2 0.12308373285539463 0.0015435274747890512 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF', 'CON__H-INV:HIT000292931'] 62776 15239 LMDHTIPEV True PC9_epitope_Rep2 1053.51648175145 1053.5153899358602 63.886 2 0.12308140152078045 0.0015435274747890512 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 127 19726 AAAWPLLL True H1975_Epitope_Rep3 853.5061747679299 853.5056249679301 82.605 1 0.12307433653733592 0.0015435274747890512 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 64312 21850 LQMEQLNGILL True PC9_epitope_Rep4 1270.69550874258 1270.6944099358602 92.248 2 0.12307295204853325 0.0015435274747890512 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000510488.1_1_3:141189685-141190057:-|nuORF', 'ENST00000504966.2_1_4:145493783-145493942:+|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF', 'ENST00000565278.1_1_16:72763309-72763579:+|nuORF'] 99266 22047 SLDDLLTNV True PC9_epitope_Rep2 988.5076908895601 988.50658993586 90.277 2 0.12307201163610619 0.0015435274747890512 0.9438714419765777 ['ENSG00000143819|ENST00000272167|EPHX1'] 35680 4645 GTNPGIITK True NCI_RA007_Epitope_Rep4 899.50763131991 899.50652993586 24.284 2 0.12307190994661543 0.0015435274747890512 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 116938 18340 TYPENWRAF True PC9_epitope_Rep3 1182.5458077337798 1182.54470993586 75.756 2 0.12307086017449827 0.0015435274747890512 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 113486 15536 TQSELATAL True PC9_epitope_Rep1 932.4814761417199 932.48092496793 64.584 1 0.12306789813314419 0.0015435274747890512 0.9438714419765777 ['ENSG00000138629|ENST00000395081|UBL7'] 86822 13039 QRPPTIVL True PC9_epitope_Rep2 922.5600012459399 922.55890993586 55.435 2 0.12306789457408066 0.0015435274747890512 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 9746 12968 AYLEAHETF True PC9_epitope_Rep2 1079.4923751785898 1079.4912699358601 55.173 2 0.12306673817741484 0.0015435274747890512 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 24506 23005 FAISILQQL True PC9_epitope_Rep5 1031.60153170475 1031.60097496793 93.479 1 0.12306643747075839 0.0015435274747890512 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 103897 8183 SRLSSDTTL True PC9_epitope_Rep5 978.4981888350201 978.49708993586 36.416 2 0.12306335886868527 0.0015435274747890512 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 113395 18913 TQLGPPYHILV True PC9_epitope_Rep4 1236.68665831104 1236.68556993586 80.836 2 0.12306292018036345 0.0015435274747890512 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 30005 18704 FYGPQVNNI True PC9_epitope_Rep5 1050.51344497634 1050.5123499358601 76.962 2 0.12306216158342598 0.0015435274747890512 0.9438714419765777 ['ENSG00000106299|ENST00000223023|WASL'] 16193 8255 EEFDAITKA True NCI_RA007_Epitope_Rep3 1022.4920408254198 1022.4909499358599 39.6 2 0.1230611766889778 0.0015435274747890512 0.9438714419765777 ['ENSG00000112210|ENST00000468148|RAB23'] 6315 6328 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 29.37 2 0.12306097289415611 0.0015435274747890512 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 39718 11144 HPVLLTEA True PC9_epitope_Rep1 878.4861675993401 878.48561496793 47.749 1 0.12305838635682971 0.0015435274747890512 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'POTEF|p.E799K|1|0.23|ENSG00000196604|chr2:130075077-130075077|C/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 8506 17014 ATVPGLLKV True PC9_epitope_Rep1 896.5695033004799 896.56840993586 70.268 2 0.12305702451063333 0.0015435274747890512 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 92075 5556 RPSPPVQSV True PC9_epitope_Rep4 965.52942939365 965.52832993586 28.137 2 0.12305402154489824 0.0015435274747890512 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 106554 22463 SVVTSIFGV True PC9_epitope_Rep5 907.5014833103099 907.50038993586 91.406 2 0.12302813620255894 0.0015435274747890512 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 77632 18279 NYVQAVEEF True PC9_epitope_Rep6 1097.5029398622898 1097.50184993586 82.952 2 0.12302565283644296 0.0015435274747890512 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 83875 12908 QEIATVVVP True H1975_Epitope_Rep2 954.5385970950199 954.53750993586 54.764 2 0.12302296850135334 0.0015435274747890512 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 124645 22154 VLIETLVTL True PC9_epitope_Rep4 999.6215984429899 999.62050993586 93.436 2 0.12302201950185129 0.0015435274747890512 0.9438714419765777 ['ENST00000480653.5_1_20:32878355-32891076:-|nuORF', 'nc|ENSG00000101444|P23526-2|AHCY', 'ENSG00000101444|ENST00000217426|AHCY', 'ENST00000606061.1_1_20:32881868-32891076:-|nuORF'] 93988 14613 RVPKTLVLV True PC9_epitope_Rep3 1023.6804507317898 1023.6793499358599 61.34 2 0.12302053746903288 0.0015435274747890512 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 104610 8515 SSVATITRL True H1975_Epitope_Rep2 946.54474510462 946.54364993586 37.708 2 0.12301318517660713 0.0015435274747890512 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 37574 17765 GYSEHFVEF True PC9_epitope_Rep2 1113.47672511445 1113.47562993586 73.621 2 0.12301202065962082 0.0015435274747890512 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 31673 14553 GEIDYEAIV True H1975_Epitope_Rep2 1007.48114178855 1007.48004993586 61.134 2 0.12301107731233586 0.0015435274747890512 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6'] 34903 7403 GQVTEAVKV True PC9_epitope_Rep2 929.5181960036099 929.51708993586 33.854 2 0.12300787359165061 0.0015435274747890512 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 8665 21876 AVATDFFTV True PC9_epitope_Rep5 969.48074786573 969.47964993586 89.183 2 0.12299605472803837 0.001574533629984597 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 67111 6598 LTDDEKTYY True H1975_Epitope_Rep3 1146.50808481238 1146.50698993586 30.334 2 0.12298743308074976 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000145293|Q9UHY7-2|ENOPH1', 'ENSG00000145293|ENST00000273920|ENOPH1'] 23667 19697 EYGPVYSTW True PC9_epitope_Rep4 1100.48147614172 1100.48097496793 83.886 1 0.12298579436701451 0.001574533629984597 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30'] 84950 20406 QHYPYFLIV True PC9_epitope_Rep4 1178.61243074162 1178.61132993586 86.639 2 0.12297787054690071 0.001574533629984597 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 48414 15408 KEDPFVFIP True H1975_Epitope_Rep2 1090.5698972233 1090.5688099358601 64.425 2 0.1229711569309852 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 96122 7086 SEDVAKIVA True H1975_Epitope_Rep2 930.5022115862998 930.50110993586 32.187 2 0.12295710843434575 0.001574533629984597 0.9438714419765777 ['ENST00000598115.1_1_19:51906295-51906697:-|nuORF', 'ENST00000477693.1_1_2:122488402-122494426:-|nuORF', 'ENSG00000155438|ENST00000285814|NIFK'] 6096 11493 APM[Oxidation]PPIIHA True PC9_epitope_Rep3 961.50552352537 961.50442993586 49.21 2 0.12295702889240444 0.001574533629984597 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 97460 10704 SGHLETVIL True NCI_RA007_Epitope_Rep1 967.5338460677499 967.53274993586 45.627 2 0.12295654039779924 0.001574533629984597 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 5761 11583 APEEHPVLL True PC9_epitope_Rep4 1003.5338460677498 1003.53274993586 52.313 2 0.12295340234305661 0.001574533629984597 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 61730 21584 LLIPGLATA True PC9_epitope_Rep2 867.54295419947 867.5424049679301 88.495 1 0.12295175327943038 0.001574533629984597 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 139962 20512 YVINDLTAV True PC9_epitope_Rep2 1006.53351171458 1006.53240993586 84.33 2 0.12295089051853658 0.001574533629984597 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS'] 52343 11494 KPFGQVIST True PC9_epitope_Rep3 975.5389314481899 975.53782993586 49.213 2 0.12294606777150036 0.001574533629984597 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 9471 14946 AVYDFFIGR True NCI_RA007_Epitope_Rep4 1086.5498304850598 1086.5487299358601 64.955 2 0.1229310649828836 0.001574533629984597 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 19968 14795 EMDSPILGDY True H1975_Epitope_Rep3 1138.4852411928198 1138.4841499358602 62.287 2 0.12292833675640027 0.001574533629984597 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 95279 21631 SADTTILFV True PC9_epitope_Rep2 965.50696261357 965.50586993586 88.679 2 0.12292689145451727 0.001574533629984597 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 967 7218 AEAAPPLRP True H1975_Epitope_Rep2 920.50796567308 920.50686993586 32.698 2 0.12292670044639875 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 1122 7683 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 34.505 2 0.12292430099636821 0.001574533629984597 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 138436 20845 YREDLDFVL True PC9_epitope_Rep5 1168.5764391557198 1168.57534993586 85.23 2 0.12291889226501183 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 70788 10226 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42717496793 44.277 1 0.1229187945221344 0.001574533629984597 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 40092 9704 HRDERVLSL True PC9_epitope_Rep5 1123.60980497267 1123.60816490379 42.294 3 0.12291840811276787 0.001574533629984597 0.9438714419765777 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 114278 8726 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.5853349679301 37.944 1 0.12291623686259123 0.001574533629984597 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 129433 12187 VTEKDLLLY True H1975_Epitope_Rep1 1092.60667665484 1092.60617496793 51.896 1 0.12291184798709628 0.001574533629984597 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2'] 27682 11661 FQDEVAKAQQL True PC9_epitope_Rep2 1275.64591569787 1275.6448099358602 50.185 2 0.12290838424725822 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 94809 15011 RYLSKVLEL True PC9_epitope_Rep4 1119.6651945904698 1119.6640899358601 65.678 2 0.12290513358891682 0.001574533629984597 0.9438714419765777 ['nc|nan|Q8WUR7-2|C15orf40', 'ENSG00000169609|ENST00000304177|C15orf40', 'nc|nan|Q8WUR7-3|C15orf40', 'ENST00000565725.1_1_15:83677164-83680359:-|nuORF'] 96182 11416 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.45890993586 48.892 2 0.12289750511764434 0.001574533629984597 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 6694 20135 AQAQEVFFL True PC9_epitope_Rep6 1051.53384606775 1051.53274993586 90.121 2 0.12289589012434253 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 135800 4945 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 24.104 2 0.12289421321940151 0.001574533629984597 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 28818 10117 FTDGQQLY True H1975_Epitope_Rep2 970.43961132974 970.43850993586 43.911 2 0.12289004885507855 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 86023 12959 QPITPGPSI True PC9_epitope_Rep6 908.4967322830399 908.49562993586 61.401 2 0.12288502396662096 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 102876 13700 SQHGVIIQL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 64.483 2 0.12288204097738617 0.001574533629984597 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 25552 5463 FERLTLKHD True NCI_RA007_Epitope_Rep4 1157.61930702721 1157.61766490379 27.596 3 0.12288109391420908 0.001574533629984597 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL'] 47550 22337 IYLTFPVAM True PC9_epitope_Rep4 1053.55689001145 1053.55578993586 94.156 2 0.12288011287242284 0.001574533629984597 0.9438714419765777 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 9797 13155 AYLHTTTTF True PC9_epitope_Rep1 1053.51311062317 1053.51200993586 55.465 2 0.12287870516078805 0.001574533629984597 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 43421 13435 IHSPVVNEL True PC9_epitope_Rep1 1006.54474510462 1006.54364993586 56.538 2 0.12287160867080141 0.001574533629984597 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 9494 10289 AWAPKPYHKF True PC9_epitope_Rep3 1243.6502132326698 1243.64857490379 44.523 3 0.12286505155786291 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 75985 8805 NRIANQVAI True PC9_epitope_Rep4 997.5668775315298 997.56578993586 41.391 2 0.12285856371534075 0.001574533629984597 0.9438714419765777 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 70557 16683 LYVVDLKKF True PC9_epitope_Rep4 1123.6641319613097 1123.66249490379 72.146 3 0.1228569606316845 0.001574533629984597 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENSG00000102595|ENST00000376747|UGGT2'] 1798 8490 AEIDAHLVA True H1975_Epitope_Rep2 937.48689587533 937.48578993586 37.609 2 0.12285493441841748 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 14936 12083 DYMKTTSNF True PC9_epitope_Rep2 1105.47501086229 1105.47390993586 51.787 2 0.12285312597061793 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 128358 6252 VSDPSSPQY True H1975_Epitope_Rep2 978.42944056886 978.4288949679301 29.003 1 0.12285195988112799 0.001574533629984597 0.9438714419765777 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 87298 21314 QSVDLVFPV True PC9_epitope_Rep4 1002.5385970950199 1002.53807496793 90.15 1 0.12285188924127897 0.001574533629984597 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 69582 11810 LVTTVTEIAG True NCI_RA007_Epitope_Rep2 1002.5597264624199 1002.5591749679301 50.538 1 0.12282345450759743 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 93678 11903 RTITVGVYEA True PC9_epitope_Rep4 1107.5924235730297 1107.5913299358601 53.562 2 0.12282344538409903 0.001574533629984597 0.9438714419765777 ['ENSG00000116717|ENST00000370986|GADD45A', 'ENST00000460575.1_1_1:68151090-68151810:+|nuORF'] 112970 19378 TPSIPVLTA True PC9_epitope_Rep4 897.51713337445 897.51658496793 82.647 1 0.12282195524612384 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 108217 9188 TEAEDMISA True H1975_Epitope_Rep2 965.4011772156899 965.4006249679301 40.294 1 0.1228186521513585 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B'] 104906 12507 STFQQMWISK True NCI_RA007_Epitope_Rep1 1254.60669373818 1254.60558993586 52.629 2 0.12281543336211359 0.001574533629984597 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000403258.1_1_6:88985645-88985837:-|nuORF', 'ENST00000423783.1_1_17:17146010-17146160:+|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENSG00000196604|ENST00000409914|POTEF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 34877 11052 GQVLVQNAL True NCI_RA007_Epitope_Rep5 940.5341804209199 940.53308993586 49.145 2 0.12281323458723557 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3', 'PHC3|p.S544L|1|0.17|ENSG00000173889|chr3:170128805-170128805|G/A|missense_variant'] 45139 21185 IQYIPTELDQV True PC9_epitope_Rep2 1317.68163250025 1317.68052993586 86.943 2 0.1228131536512017 0.001574533629984597 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 73966 10097 NHNFSQQCL True PC9_epitope_Rep1 1089.46617751409 1089.46508993586 43.71 2 0.12279652672094739 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D'] 75314 14635 NPVDILTY True H1975_Epitope_Rep1 933.4807478657301 933.4801949679301 61.503 1 0.12279180869840459 0.001574533629984597 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 1688 10073 AEGPEVICA True H1975_Epitope_Rep3 887.4058686733099 887.40531496793 43.784 1 0.12279101118971796 0.001574533629984597 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 116198 14090 TVTNAVVTV True PC9_epitope_Rep5 902.50729696674 902.50618993586 59.208 2 0.12278930483644375 0.001574533629984597 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 17362 5425 EHDTTEYKL True PC9_epitope_Rep4 1134.51931820242 1134.51766490379 27.6 3 0.12278899556178838 0.001574533629984597 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 111184 19857 TLFEDSFQQI True PC9_epitope_Rep6 1226.58191845898 1226.58082993586 89.039 2 0.12278421152373664 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'ENST00000466609.1_1_3:98377983-98378526:+|nuORF', 'ENST00000483727.5_1_20:33033173-33065666:+|nuORF', 'nc|ENSG00000198373|O00308-3|WWP2', 'ENST00000518683.5_1_8:87410815-87460532:+|nuORF', 'nc|ENSG00000123124|Q9H0M0-6|WWP1', 'nc|ENSG00000123124|Q9H0M0-3|WWP1', 'WWP1|p.K872Vfs*4|1|0.15|ENSG00000123124|chr8:86461789-86461790|AA/-|frameshift_variant', 'ENSG00000123124|ENST00000517970|WWP1', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'ITCH-NCOA6|2|fusion', 'nc|ENSG00000289720|Q96J02-3|ITCH'] 46496 22973 ITPENLPQILL True PC9_epitope_Rep1 1249.7281887698498 1249.72708993586 93.165 2 0.1227732226513405 0.001574533629984597 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 38601 7540 HHIGDRSLSL True PC9_epitope_Rep4 1133.59415490853 1133.5924949037899 36.372 3 0.12277294802877799 0.001574533629984597 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF'] 53469 16561 KVIEINPYL True PC9_epitope_Rep6 1087.62774645259 1087.62664993586 76.14 2 0.12277291729728847 0.001574533629984597 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8', 'PSMB8|p.G115V|1|0.5|ENSG00000204264|chr6:32842735-32842735|C/A|missense_variant', 'nc|ENSG00000100804|P28074-2|PSMB5', 'ENSG00000100804|ENST00000361611|PSMB5'] 86780 17534 QRMTTQLLL True PC9_epitope_Rep3 1102.6168644990598 1102.61576993586 72.628 2 0.12276841357728081 0.001574533629984597 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 57448 9328 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 40.841 2 0.12276575980301621 0.001574533629984597 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 120348 8238 VFPSIVGRPR True NCI_RA007_Epitope_Rep1 1126.6611122695397 1126.65946490379 36.043 3 0.12276477733608297 0.001574533629984597 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 119832 6266 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51676993586 29.171 2 0.12276432629376904 0.001574533629984597 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 135447 8323 YEAADKWVA True H1975_Epitope_Rep3 1051.4974605590298 1051.49636993586 36.997 2 0.12275413355233901 0.001601253747615154 0.9438714419765777 ['ENST00000496594.5_1_9:130883426-130884979:-|nuORF', 'ENSG00000148334|ENST00000338961|PTGES2'] 1811 5602 AEIDEEPVSKA True H1975_Epitope_Rep3 1186.5717476981001 1186.57064993586 26.588 2 0.12274464531995798 0.001601253747615154 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000550343.1_1_12:57108115-57108487:-|nuORF', 'ENST00000419462.1_1_8:102381113-102381542:+|nuORF'] 16547 5761 EEQHPELTP True H1975_Epitope_Rep2 1078.4931034545798 1078.49200993586 27.155 2 0.12274282706274665 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 133019 14540 VYVQHPITF True PC9_epitope_Rep4 1102.5811306133398 1102.58002993586 63.842 2 0.12274248257561575 0.001601253747615154 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 2037 13784 AELDSVFSSA True H1975_Epitope_Rep2 1024.47130538084 1024.47020993586 58.165 2 0.12273898289020777 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000173744|P52594-2|AGFG1', 'ENSG00000173744|ENST00000310078|AGFG1', 'nc|ENSG00000173744|P52594-3|AGFG1', 'nc|ENSG00000173744|P52594-4|AGFG1'] 4644 16712 ALATLIHQV True PC9_epitope_Rep3 964.5705659296401 964.56946993586 69.418 2 0.12273720565415694 0.001601253747615154 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 36553 9161 GVLAWVKEK True NCI_RA007_Epitope_Rep4 1028.6018660579198 1028.6007699358602 42.077 2 0.12273359066958348 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-7|IL32'] 17824 7082 EIAENALGK True PC9_epitope_Rep1 943.4974605590298 943.49636993586 32.048 2 0.12273183318481659 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'ENST00000469172.5_1_10:70097616-70097877:+|nuORF'] 685 11751 AAVDATVNQVL True NCI_RA007_Epitope_Rep3 1099.58733819259 1099.58624993586 53.333 2 0.12273152199698688 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 123071 17257 VHAELADVL True PC9_epitope_Rep1 965.5181960036099 965.51708993586 71.196 2 0.12273101182952034 0.001601253747615154 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000493855.1_1_7:56123379-56123520:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 103732 13590 SREPSQVIF True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 57.331 2 0.12272141952631069 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 34364 4264 GPSSVEDIK True NCI_RA007_Epitope_Rep5 930.4658260775799 930.46472993586 22.973 2 0.12271999964467073 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 76984 5148 NVSDAVAQSTR True NCI_RA007_Epitope_Rep1 1146.5629143499002 1146.56125490379 24.108 3 0.12271629939997401 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 46724 4416 IVAGTLTNK True NCI_RA007_Epitope_Rep5 915.53893144819 915.53782993586 23.617 2 0.12271432309228719 0.001601253747615154 0.9438714419765777 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 48804 3361 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 17.647 2 0.12271119211627302 0.001601253747615154 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 2632 7410 AESPGVPVA True NCI_RA007_Epitope_Rep5 825.4232329896099 825.4226849679301 35.18 1 0.12270870077489508 0.001601253747615154 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 93813 16045 RVAQLEQVYI True PC9_epitope_Rep4 1217.6768219033297 1217.67572993586 69.651 2 0.12269772907492067 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 34773 21393 GQSELTLLL True PC9_epitope_Rep4 972.54916177872 972.54806993586 90.457 2 0.12269673134881663 0.001601253747615154 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 96009 9769 SEAFSVASAA True H1975_Epitope_Rep2 938.4345259492999 938.43397496793 42.563 1 0.12269452449961782 0.001601253747615154 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 16086 8651 EEDIRDLAA True H1975_Epitope_Rep3 1030.4931034545798 1030.49200993586 38.272 2 0.12269063523972068 0.001601253747615154 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 116355 20045 TVYEGFISA True PC9_epitope_Rep3 985.4756624852898 985.47456993586 82.352 2 0.12268919522507547 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 87059 7225 QSDVIHQSVY True H1975_Epitope_Rep3 1174.56185172074 1174.56074993586 32.763 2 0.12268869132041757 0.001601253747615154 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 135684 11559 YEIAEGISA True H1975_Epitope_Rep1 951.4549270407099 951.45382993586 49.449 2 0.12268301027594235 0.001601253747615154 0.9438714419765777 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000481911.5_1_6:36446898-36449467:+|nuORF'] 64620 15809 LREPLPATL True PC9_epitope_Rep5 1008.59678067748 1008.59568993586 65.799 2 0.12267919291311274 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 4953 19762 ALIDRMVNL True PC9_epitope_Rep2 1043.57975071435 1043.57864993586 81.402 2 0.12267675270162287 0.001601253747615154 0.9438714419765777 ['ENSG00000175197|ENST00000346473|DDIT3', 'nc|ENSG00000285133|P35638-2|DDIT3'] 46723 4333 IVAGTLTNK True NCI_RA007_Epitope_Rep5 915.53893144819 915.53782993586 23.271 2 0.12267219904345175 0.001601253747615154 0.9438714419765777 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 131229 19811 VVPQQLLTV True PC9_epitope_Rep4 995.60153170475 995.60042993586 84.329 2 0.12267115657322789 0.001601253747615154 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 17304 13013 EHDPHVLLAV True PC9_epitope_Rep2 1128.5927579262 1128.59110490379 55.339 3 0.12266043658562183 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 83809 6271 QEEPQSLQA True H1975_Epitope_Rep3 1028.4774533904397 1028.47634993586 29.129 2 0.12264951661478182 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-13|PML', 'ENSG00000140464|ENST00000268058|PML', 'nc|ENSG00000140464|P29590-14|PML', 'nc|ENSG00000140464|P29590-10|PML', 'nc|ENSG00000140464|P29590-12|PML', 'nc|ENSG00000140464|P29590-11|PML', 'ENST00000564725.1_1_15:74290377-74317280:+|nuORF', 'ENST00000569161.1_1_15:74315283-74324931:+|nuORF'] 76472 14043 NTDFGDEFY True H1975_Epitope_Rep1 1106.4192698079798 1106.41816993586 59.18 2 0.12264668857648363 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 127144 8771 VQDNPRALV True PC9_epitope_Rep4 1010.5508931142199 1010.54978993586 41.247 2 0.12264011997041249 0.001601253747615154 0.9438714419765777 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89', 'KLHL24-CEP89|1|fusion'] 73882 10315 NHHLFTTTI True PC9_epitope_Rep6 1082.5508931142201 1082.5497899358602 50.375 2 0.12264004024771961 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 86963 18576 QRVEDAFYTL True PC9_epitope_Rep2 1240.6088019131596 1240.6077099358602 76.805 2 0.12263845118808492 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000133703|P01116|KRAS'] 115297 17459 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54427496793 72.448 1 0.12263828643652554 0.001601253747615154 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 34167 18813 GPFSQFIKA True PC9_epitope_Rep2 993.5283667644898 993.52726993586 77.736 2 0.12263662496322485 0.001601253747615154 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 24680 7067 FATHAAALSVR True PC9_epitope_Rep4 1142.6196413803798 1142.61799490379 34.449 3 0.12263348218491142 0.001601253747615154 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 76453 7041 NTAQGFRTV True PC9_epitope_Rep5 992.5039429218 992.50284993586 32.05 2 0.12262490618271553 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 103139 20575 SQMPTVIYV True PC9_epitope_Rep2 1036.5263181591597 1036.52577496793 84.573 1 0.12261660415601433 0.001601253747615154 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 25872 6001 FGHGAEDSL True NCI_RA007_Epitope_Rep3 931.40356017419 931.40246993586 30.582 2 0.1226141892957416 0.001601253747615154 0.9438714419765777 ['ENSG00000173432|ENST00000356524|SAA1'] 7187 17286 ARDETEFYL True PC9_epitope_Rep3 1142.5244035828598 1142.5233099358602 71.664 2 0.12261290265956154 0.001601253747615154 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 94758 15022 RYLPDTLLL True NCI_RA007_Epitope_Rep4 1102.63864548946 1102.63754993586 65.294 2 0.12261145356984939 0.001601253747615154 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 6101 10379 APM[Oxidation]PPIIHA True PC9_epitope_Rep4 961.50552352537 961.50442993586 47.622 2 0.12260783235712251 0.001601253747615154 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 72921 16738 NAYTGIVLL True H1975_Epitope_Rep3 962.54368247546 962.5431349679301 69.91 1 0.1226053382125954 0.001601253747615154 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 88290 18999 QYILFPLRF True NCI_RA007_Epitope_Rep2 1195.67536535135 1195.6742699358601 78.755 2 0.12260502994522214 0.001601253747615154 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 48029 19803 KALDGFVMV True PC9_epitope_Rep3 978.5208388558999 978.51974993586 81.405 2 0.12260034186622307 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 39069 5177 HKVPGDVSL True NCI_RA007_Epitope_Rep3 950.5185303567799 950.51742993586 27.355 2 0.12260028615377375 0.001601253747615154 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 43658 20603 IILPEDIEL True PC9_epitope_Rep6 1053.59577761797 1053.59468993586 91.979 2 0.12259439754659071 0.001601253747615154 0.9438714419765777 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 14031 15199 DSDAPLFY True H1975_Epitope_Rep1 926.4021631918599 926.4016149679301 63.726 1 0.1225941540215008 0.001601253747615154 0.9438714419765777 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 435 10730 AALQELLSK True NCI_RA007_Epitope_Rep5 971.5651461960299 971.56404993586 47.913 2 0.12259390251171774 0.001601253747615154 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 109526 14202 THAGVRLYF True PC9_epitope_Rep5 1062.5610638750998 1062.5599699358602 59.636 2 0.12259022000413074 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000113569|O75694-2|NUP155', 'ENSG00000113569|ENST00000231498|NUP155'] 127945 11584 VRPPVQVY True PC9_epitope_Rep1 956.5443511817998 956.54324993586 49.435 2 0.12258824427922675 0.001601253747615154 0.9438714419765777 ['ENST00000495005.5_1_21:35281377-35288052:-|nuORF', 'ENST00000491703.5_1_21:35279611-35286837:-|nuORF', 'ENSG00000241837|ENST00000290299|ATP5PO'] 2606 7623 AESLQPVAA True H1975_Epitope_Rep2 884.4603467743199 884.4597949679301 34.275 1 0.12257441157507877 0.001601253747615154 0.9438714419765777 ['ENSG00000038219|ENST00000040738|BOD1L1'] 108980 7737 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46908993586 34.744 2 0.12256285127159432 0.001601253747615154 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 128776 5864 VSQVGKEL True PC9_epitope_Rep1 858.4810822188998 858.47998993586 27.372 2 0.12256021198221674 0.001601253747615154 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 70911 8067 MELESKLNEA True H1975_Epitope_Rep3 1162.55398945898 1162.55288993586 36.003 2 0.12255807585046587 0.001601253747615154 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF', 'ENST00000572915.6_1_17:2570288-2573571:+|nuORF'] 66 12683 AAAGSPVFL True H1975_Epitope_Rep3 831.44905381463 831.44850496793 53.995 1 0.1225574989673106 0.001601253747615154 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 114811 6363 TTDFHNPGY True H1975_Epitope_Rep2 1050.4406739588999 1050.4395699358602 29.403 2 0.12255552666611881 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 138971 11566 YSESSQLLY True H1975_Epitope_Rep3 1088.50260550912 1088.50207496793 49.617 1 0.12255446257993409 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 115818 14802 TVMDSKIVQV True PC9_epitope_Rep1 1118.60054572858 1118.59997496793 61.756 1 0.1225472620141794 0.001601253747615154 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 2007 6699 AEKVEEIVA True H1975_Epitope_Rep2 986.5284263341398 986.5273299358599 30.677 2 0.12254719736288017 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B'] 70602 19737 M[Oxidation]AAAWPLLL True H1975_Epitope_Rep1 1000.5415746809199 1000.5410749679301 82.149 1 0.12254328801490892 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 76231 11057 NSATGVPTV True PC9_epitope_Rep1 844.42904664604 844.4279499358599 47.42 2 0.12253920055510575 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 59885 6106 LHHDDPEVL True PC9_epitope_Rep4 1073.51417325233 1073.5130699358601 30.496 2 0.1225378736601179 0.001601253747615154 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 24695 16062 FAVAPNQNL True PC9_epitope_Rep2 972.50288029264 972.50178993586 67.038 2 0.12253381175388585 0.001601253747615154 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 40399 15411 HRTVLNQIL True PC9_epitope_Rep5 1092.64037682496 1092.63926993586 64.287 2 0.12252664233204554 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 12320 8243 DITSDTSGDFR True NCI_RA007_Epitope_Rep5 1212.5258601348398 1212.5247699358601 38.386 2 0.12252141854171227 0.001601253747615154 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 13884 7016 DRDPASGTAL True PC9_epitope_Rep2 1001.47778774361 1001.47668993586 32.39 2 0.12251951901080375 0.001601253747615154 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 11793 16182 DHIRVIVQL True PC9_epitope_Rep2 1091.64512785223 1091.64402993586 67.497 2 0.12251848653508465 0.001601253747615154 0.9438714419765777 ['ENSG00000160445|ENST00000291900|ZER1'] 139638 15102 YTSDYFISY True H1975_Epitope_Rep2 1157.49170647225 1157.4906099358602 63.243 2 0.12251642762987834 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 75533 21194 NQLDSLMGL True PC9_epitope_Rep4 989.48518162317 989.48408993586 89.688 2 0.1225096785585982 0.001601253747615154 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 16853 6678 EFSGNPIK True PC9_epitope_Rep4 890.4497820906199 890.44868993586 32.867 2 0.12250691518901302 0.001601253747615154 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 89661 8565 REVDPLRIPP True H1975_Epitope_Rep3 1190.6771562565 1190.6760499358602 37.935 2 0.12250625363551974 0.001601253747615154 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 139786 20705 YVDDFGVSV True PC9_epitope_Rep1 999.4549270407099 999.4543749679301 84.468 1 0.12250349244637605 0.001601253747615154 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 76560 17360 NTDSLDWALY True H1975_Epitope_Rep1 1196.5349682665599 1196.5338699358601 72.241 2 0.12250173679891403 0.001601253747615154 0.9438714419765777 ['ENSG00000108561|ENST00000225698|C1QBP'] 4115 7196 AHTAEVNCL True PC9_epitope_Rep4 956.43856578392 956.43746993586 34.982 2 0.12249511257684462 0.001601253747615154 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 29734 21538 FVPQFISQL True PC9_epitope_Rep4 1077.5858816406098 1077.58478993586 91.025 2 0.12249427522183766 0.001601253747615154 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 135565 6363 YEEGPGKNLP True H1975_Epitope_Rep3 1102.5294889632999 1102.52897496793 29.462 1 0.12249359733186367 0.001601253747615154 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 11874 9690 DHNVSSVAI True PC9_epitope_Rep2 940.46140940348 940.46030993586 42.612 2 0.12249345747668049 0.001601253747615154 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 56851 7587 LEDGGSALAA True H1975_Epitope_Rep3 902.4345259492999 902.43397496793 34.164 1 0.1224907778679365 0.001601253747615154 0.9438714419765777 ['ENSG00000223496|ENST00000435634|EXOSC6'] 105713 10367 SVHKGFAFV True PC9_epitope_Rep2 990.5287011176598 990.52760993586 45.202 2 0.12248602079568527 0.001601253747615154 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 113096 6856 TQADWQHRV True PC9_epitope_Rep1 1139.5472047161102 1139.54554490379 31.176 3 0.12248325357092901 0.001601253747615154 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'HSD17B12-ALKBH3|1|fusion'] 130692 10029 VVDGAFKEV True PC9_epitope_Rep4 962.50729696674 962.50618993586 46.24 2 0.12248315102600836 0.001601253747615154 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF', 'nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 103930 9701 SRPENAIIY True PC9_epitope_Rep4 1061.5505587610498 1061.54946993586 44.95 2 0.12247847853823694 0.001601253747615154 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 75630 10932 NQSDTSVSL True PC9_epitope_Rep5 949.43525422529 949.43414993586 47.04 2 0.12247208508727736 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 61845 18387 LLLDQLTKA True PC9_epitope_Rep4 1013.6120963884499 1013.61098993586 78.791 2 0.12247114792755902 0.001601253747615154 0.9438714419765777 ['ENST00000510524.5_1_3:129170769-129177513:+|nuORF'] 73794 9569 NHDTALTL True PC9_epitope_Rep2 883.43994568291 883.43884993586 42.153 2 0.12246904742925684 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 96178 11411 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.4594649679301 48.872 1 0.12246277592548248 0.001601253747615154 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 105199 7960 STPLAGLAPK True NCI_RA007_Epitope_Rep3 953.55458151233 953.55348993586 38.415 2 0.12245227252928405 0.001601253747615154 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 108366 8919 TEDPNQLTV True H1975_Epitope_Rep2 1015.4822044177099 1015.48110993586 39.269 2 0.12245171614069776 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2', 'NFE2L2|p.S270L|1|0.31|ENSG00000116044|chr2:177231794-177231794|G/A|missense_variant'] 95171 18288 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41211496793 75.55 1 0.12244919186227543 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 85079 18576 QIPQVLNQV True PC9_epitope_Rep4 1037.58694426977 1037.58584993586 79.529 2 0.12244362641388817 0.001601253747615154 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 76903 20168 NVLDHFSEL True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 82.831 2 0.12243282617128404 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 9362 4548 AVTTVVNPK True NCI_RA007_Epitope_Rep4 927.5389314481899 927.53782993586 23.897 2 0.12242666436040939 0.001601253747615154 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1'] 12636 7315 DLEGLSQR True NCI_RA007_Epitope_Rep1 916.46140940348 916.46030993586 32.446 2 0.12242617932694196 0.001601253747615154 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 17692 17636 EHSLPTLGL True PC9_epitope_Rep2 965.51819600361 965.5176449679301 73.118 1 0.12241814576724674 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 124883 23321 VLLNEILEQV True PC9_epitope_Rep1 1168.67033954056 1168.66924993586 94.494 2 0.1224144405200087 0.001601253747615154 0.9438714419765777 ['ENSG00000109805|ENST00000251496|NCAPG'] 106730 19718 SYDPDFNQL True PC9_epitope_Rep1 1097.46655435357 1097.46597496793 80.671 1 0.12240877247683604 0.001601253747615154 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 123791 18788 VITETVVEV True PC9_epitope_Rep5 987.5488274255499 987.54772993586 77.282 2 0.1224064518501301 0.001601253747615154 0.9438714419765777 ['ENST00000514606.1_1_4:139988805-140005344:-|nuORF', 'ELF2|p.V487Efs*6|3|0.16|ENSG00000109381|chr4:139059302-139059305|CCAA/-|frameshift_variant', 'nc|ENSG00000109381|Q15723-4|ELF2', 'nc|ENSG00000109381|Q15723-2|ELF2', 'nc|ENSG00000109381|Q15723-3|ELF2', 'nc|ENSG00000109381|Q15723-1|ELF2', 'ENSG00000109381|ENST00000686138|ELF2'] 31281 15212 GDSVIVVLR True PC9_epitope_Rep3 956.5654805492 956.56438993586 63.658 2 0.12240351866659396 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 128340 13832 VSDMVEDLY True H1975_Epitope_Rep1 1069.4637774722498 1069.46327496793 58.352 1 0.122400862650847 0.001601253747615154 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 104364 20926 SSFPRFYFV True PC9_epitope_Rep2 1148.5654805492 1148.5643899358602 85.938 2 0.1223995761884931 0.001601253747615154 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 96005 9052 SEAFSVASA True H1975_Epitope_Rep3 867.3974121645899 867.39686496793 39.804 1 0.12239797946938324 0.001601253747615154 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 120333 13732 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 64.608 2 0.12239413928597052 0.001601253747615154 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 105826 14713 SVIPQIQKV True PC9_epitope_Rep5 1010.6124307416198 1010.61132993586 61.592 2 0.12238965106467825 0.001601253747615154 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 84177 10747 QESIPDIQA True H1975_Epitope_Rep2 999.4872897981498 999.48618993586 46.366 2 0.12238790417224996 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 53540 15085 KVPEWVDTV True PC9_epitope_Rep6 1071.5600608155898 1071.5589699358602 70.082 2 0.12238425967949923 0.001601253747615154 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 11639 11901 DHASIQMNV True PC9_epitope_Rep5 1013.46002950449 1013.4589299358599 50.774 2 0.12238153880371486 0.001601253747615154 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 72520 22468 M[Oxidation]VDGTLLLL True PC9_epitope_Rep2 989.5467196310099 989.54617496793 91.912 1 0.12238129852870942 0.001601253747615154 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 43429 11885 IHSPVVNEL True PC9_epitope_Rep4 1006.54474510462 1006.54364993586 53.491 2 0.12237564013987942 0.001601253747615154 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 86586 11225 QRDETALQL True PC9_epitope_Rep2 1072.5512870370399 1072.55018993586 48.505 2 0.12237309391793484 0.001601253747615154 0.9438714419765777 ['TRIP11|p.S1808Afs*25|2|0.16|ENSG00000100815|chr14:91975208-91975208|C/-|frameshift_variant', 'nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 89072 6161 REENPSSVLA True H1975_Epitope_Rep3 1100.5462016565998 1100.5451099358602 28.711 2 0.12237287169896315 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-5|NR3C1', 'nc|ENSG00000113580|P04150-10|NR3C1'] 60245 17002 LIDTLLDGY True H1975_Epitope_Rep2 1021.5331773614098 1021.53208993586 70.651 2 0.1223637169699707 0.001601253747615154 0.9438714419765777 ['nc|nan|Q9BWL3-5|C1orf43', 'nc|nan|Q9BWL3-3|C1orf43', 'nc|nan|Q9BWL3-4|C1orf43', 'nc|nan|Q9BWL3-2|C1orf43', 'ENSG00000143612|ENST00000368521|C1orf43'] 73616 19788 NGFPVFATV True PC9_epitope_Rep6 950.48616759934 950.48561496793 88.77 1 0.12236161130588262 0.001601253747615154 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 86961 7753 QRVDSPVTV True PC9_epitope_Rep6 999.5349086969098 999.53380993586 39.183 2 0.12235697889297929 0.001601253747615154 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 71935 9490 MPSSVPLRA True PC9_epitope_Rep6 956.5113368013599 956.51022993586 46.755 2 0.12235626793131546 0.001601253747615154 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 8172 8563 ATGDMSGLLK True NCI_RA007_Epitope_Rep3 991.5008316873099 991.49972993586 40.757 2 0.12234749737066072 0.001601253747615154 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 34663 23109 GQLDFSEFL True PC9_epitope_Rep2 1054.49712620586 1054.49657496793 94.379 1 0.12233613911080883 0.001601253747615154 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 9571 11106 AYAPPPHVI True PC9_epitope_Rep2 963.5178020807899 963.51670993586 48.043 2 0.12232875002869431 0.001601253747615154 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 74718 24691 NLLDLLTEV True PC9_epitope_Rep1 1028.57537652656 1028.57426993586 99.863 2 0.12232144619636892 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 138831 8913 YSDKYGLGY True H1975_Epitope_Rep2 1064.48147614172 1064.4803699358602 39.249 2 0.12231859349510853 0.001601253747615154 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 90488 4355 RKAALEQDL True NCI_RA007_Epitope_Rep5 1042.5771078620598 1042.5760099358602 23.362 2 0.12231851451838885 0.001601253747615154 0.9438714419765777 ['ENSG00000100292|ENST00000216117|HMOX1'] 87477 7315 QTETHNVFY True H1975_Epitope_Rep2 1137.50908787189 1137.50798993586 33.077 2 0.12230874449384656 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000131724|P78552-2|IL13RA1', 'ENSG00000131724|ENST00000371666|IL13RA1'] 7201 14900 ARDETEFYL True PC9_epitope_Rep6 1142.5244035828598 1142.5233099358602 69.303 2 0.1223080780720078 0.001601253747615154 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 2887 10881 AEYSNTWTP True H1975_Epitope_Rep2 1067.45598966987 1067.4548899358601 46.882 2 0.1223056610261355 0.001601253747615154 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 120392 10531 VFSGLVSTGLK True NCI_RA007_Epitope_Rep3 1106.63356010902 1106.6324699358602 48.479 2 0.12230448651870426 0.001601253747615154 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 131300 19065 VVQPLLVSV True PC9_epitope_Rep6 952.5957180483199 952.59516496793 85.978 1 0.12230169091393553 0.001601253747615154 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 46923 20519 IVLDRLIEL True PC9_epitope_Rep4 1082.66994561774 1082.6688499358602 87.078 2 0.1222926909274633 0.001601253747615154 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 43563 15790 IIEPSLRQL True PC9_epitope_Rep4 1067.6338944621898 1067.63278993586 68.662 2 0.1222920157349452 0.001601253747615154 0.9438714419765777 ['ENSG00000221983|ENST00000442744|UBA52'] 8600 20337 AVAGATSLVTL True PC9_epitope_Rep1 1001.57571087973 1001.5746099358599 83.057 2 0.12228413044182077 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF', 'ENSG00000227507|ENST00000429299|LTB'] 64175 12892 LQHEGIFRV True PC9_epitope_Rep5 1097.5981776598098 1097.5970899358601 54.599 2 0.12227123146343283 0.001601253747615154 0.9438714419765777 ['ENSG00000089820|ENST00000350060|ARHGAP4', 'nc|ENSG00000089820|P98171-2|ARHGAP4', 'ENST00000494397.5_1_X:153175958-153178171:-|nuORF', 'ENST00000470209.5_1_X:153173185-153178999:-|nuORF', 'ENST00000404127.6_1_X:153173185-153186849:-|nuORF', 'ENSG00000266028|ENST00000573034|SRGAP2'] 75385 14903 NQDTHLLYV True PC9_epitope_Rep2 1101.54547338061 1101.54436993586 62.589 2 0.1222699322713922 0.001601253747615154 0.9438714419765777 ['ENSG00000182179|ENST00000333486|UBA7'] 7664 5127 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep1 990.4618036426001 990.46070993586 24.574 2 0.12226546577892393 0.001601253747615154 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 4947 12395 ALIARVTNV True PC9_epitope_Rep2 955.58146496651 955.58036993586 52.987 2 0.12225911988845863 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD', 'nc|ENSG00000103490|Q9ULZ3-3|PYCARD', 'ENST00000565022.1_1_16:31212908-31213633:-|nuORF'] 7328 5920 ARSTDQTVL True PC9_epitope_Rep3 989.51417325233 989.51306993586 27.833 2 0.12225432008040363 0.001601253747615154 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 127021 5857 VPYGVGKAA True PC9_epitope_Rep2 860.4756029156398 860.4745099358599 27.927 2 0.12224746400837937 0.001601253747615154 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 89238 10457 REIWNQISA True NCI_RA007_Epitope_Rep5 1115.57235683479 1115.5712499358601 46.855 2 0.1222358352623074 0.001601253747615154 0.9438714419765777 ['ENSG00000197872|ENST00000381323|CYRIA'] 86609 12863 QRDPNSPLYSV True PC9_epitope_Rep1 1274.62551460646 1274.62440993586 54.352 2 0.1222335721206659 0.001601253747615154 0.9438714419765777 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF'] 135806 12249 YENSYALAV True H1975_Epitope_Rep2 1028.4814761417197 1028.4803699358602 52.197 2 0.1222312263050298 0.0016346546791990192 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR', 'nc|ENSG00000146648|P00533-2|EGFR', 'nc|ENSG00000146648|P00533-4|EGFR', 'nc|ENSG00000146648|P00533-3|EGFR'] 116727 19932 TYLDIPLVI True NCI_RA007_Epitope_Rep3 1045.60594837885 1045.60484993586 86.87 2 0.12223038074254666 0.0016346546791990192 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 83048 20874 PYLDSFYEY True PC9_epitope_Rep4 1195.5073565363898 1195.50677496793 88.447 1 0.12222984034739212 0.0016346546791990192 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 21046 11183 ERDGGFSEL True PC9_epitope_Rep2 1008.4512386426 1008.4501499358599 48.341 2 0.1222260080897584 0.0016346546791990192 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP'] 31091 10793 GAYKYIQEL True H1975_Epitope_Rep3 1083.56006081559 1083.5589699358602 46.596 2 0.12222443881124971 0.0016346546791990192 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 32708 10649 GHSGDVMSL True PC9_epitope_Rep5 901.3963666187701 901.39526993586 45.949 2 0.12222224010107531 0.0016346546791990192 0.9438714419765777 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'GNB2|p.A181V|1|0.43|ENSG00000172354|chr7:100678142-100678142|C/T|missense_variant', 'ENSG00000114450|ENST00000232564|GNB4'] 133509 21036 WHDSDWIL True PC9_epitope_Rep3 1070.48214484806 1070.48104993586 86.193 2 0.12222082680448602 0.0016346546791990192 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50'] 89667 6212 REVDPPMGP True H1975_Epitope_Rep2 996.4698659121999 996.46876993586 28.864 2 0.12221855122009816 0.0016346546791990192 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 69488 10650 LVSESSDVLPK True PC9_epitope_Rep2 1172.6288686514001 1172.6277699358602 46.278 2 0.12221419812403712 0.0016346546791990192 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 96189 11767 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 50.337 1 0.12221031375086991 0.0016346546791990192 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 26052 15980 FHDMGGVQL True PC9_epitope_Rep3 1002.4593012284997 1002.4582099358599 66.613 2 0.1222093448396464 0.0016346546791990192 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 28413 10595 FSDYLHPQY True H1975_Epitope_Rep1 1168.5189242796 1168.5178299358602 45.707 2 0.12220342457850006 0.0016346546791990192 0.9438714419765777 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion'] 89000 4169 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 21.154 2 0.12220213312069614 0.001655461333153147 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 73962 16017 NHM[Oxidation]AVAFVL True PC9_epitope_Rep4 1016.5113371818 1016.51022993586 69.542 2 0.1222017136024406 0.001655461333153147 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 21665 6621 ERVDSANAL True PC9_epitope_Rep5 973.4828731240499 973.48176993586 30.441 2 0.1222008695967021 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2'] 75772 4829 NRAPNTAEL True PC9_epitope_Rep4 984.4988575413599 984.49776993586 25.158 2 0.12219761851628702 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 140862 14558 YYTNSLEKL True PC9_epitope_Rep1 1129.5655401188499 1129.56444993586 60.821 2 0.12219508667091301 0.001655461333153147 0.9438714419765777 ['ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3'] 86589 10022 QRDETALQL True PC9_epitope_Rep6 1072.5512870370399 1072.55018993586 49.119 2 0.12219246433265275 0.001655461333153147 0.9438714419765777 ['TRIP11|p.S1808Afs*25|2|0.16|ENSG00000100815|chr14:91975208-91975208|C/-|frameshift_variant', 'nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 3237 6182 AGFAGDDAPR True PC9_epitope_Rep1 975.4410083120698 975.43990993586 28.594 2 0.12219220695280435 0.001655461333153147 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 120 19953 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.5056249679301 82.732 1 0.12218016155191722 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 96999 5562 SEVPEQPSA True NCI_RA007_Epitope_Rep3 942.4294405688601 942.42834993586 28.872 2 0.12218009431685103 0.001655461333153147 0.9438714419765777 ['ENSG00000184557|ENST00000330871|SOCS3'] 6282 5693 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 26.719 2 0.1221786896594114 0.001655461333153147 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 120985 11590 VGETIIDLENR True NCI_RA007_Epitope_Rep1 1257.65648038157 1257.65538993586 49.053 2 0.12217695751985491 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF'] 31668 6854 GEIASFDKA True NCI_RA007_Epitope_Rep5 936.4552613938799 936.45416993586 33.047 2 0.12217509549326012 0.001655461333153147 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 88858 5004 REAEFTKSIA True H1975_Epitope_Rep3 1150.59823722946 1150.5965849037902 24.374 3 0.1221736941312563 0.001655461333153147 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 112834 6237 TPMGPGRTV True PC9_epitope_Rep5 914.46438660894 914.46328993586 28.97 2 0.12214586675155288 0.001655461333153147 0.9438714419765777 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 139876 15337 YVDPVNKVL True PC9_epitope_Rep5 1045.58079626017 1045.5796899358602 64.004 2 0.12214027026158786 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 66593 7246 LSSPATLNSR True PC9_epitope_Rep3 1044.5563724174801 1044.55526993586 32.883 2 0.12213399314325972 0.001655461333153147 0.9438714419765777 ['CON__P00761'] 7212 11905 ARDFTVSAM True PC9_epitope_Rep2 996.4698659121999 996.46876993586 51.117 2 0.1221273033358361 0.001655461333153147 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 2849 7571 AEVVNGYEA True H1975_Epitope_Rep3 950.4345259492998 950.43397496793 34.103 1 0.12212303896668297 0.001655461333153147 0.9438714419765777 ['ENSG00000076513|ENST00000261739|ANKRD13A', 'ANKRD13A|p.A557Hfs*21|1|0.16|ENSG00000076513|chr12:110037449-110037450|AG/-|frameshift_variant'] 7211 12807 ARDFTVSAM True PC9_epitope_Rep1 996.4698659121999 996.46876993586 54.136 2 0.12212297324508492 0.001655461333153147 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 34688 16134 GQLPNLQTV True PC9_epitope_Rep6 968.5290950404801 968.52798993586 74.403 2 0.12210712032905567 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 84888 22538 QHSEIFWLL True PC9_epitope_Rep5 1171.60259433391 1171.6014899358602 91.698 2 0.12209713231208456 0.001655461333153147 0.9438714419765777 ['ENST00000565925.5_1_16:81015450-81030931:-|nuORF', 'ENST00000569187.5_1_16:81015453-81040468:-|nuORF'] 106850 22132 SYIDVLPEF True PC9_epitope_Rep4 1081.53317736141 1081.53267496793 93.347 1 0.12208891089663679 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 27690 18904 FQDGDTIVNV True PC9_epitope_Rep5 1106.52440358286 1106.5233099358602 77.736 2 0.12208848868345987 0.001655461333153147 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 72915 16681 NAYTGIVLL True H1975_Epitope_Rep1 962.54368247546 962.5431349679301 69.559 1 0.12208170263162642 0.001655461333153147 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 125961 9903 VPAGGAVAV True PC9_epitope_Rep2 739.42283906679 739.42229496793 43.423 1 0.12208088913983338 0.001655461333153147 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 86782 17184 QRMTTQLLL True PC9_epitope_Rep5 1102.6168644990598 1102.61576993586 71.119 2 0.12207833769809395 0.001655461333153147 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 110455 15656 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.53308993586 65.365 2 0.12207252295542328 0.001655461333153147 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 84202 9050 QETLTNISA True H1975_Epitope_Rep2 975.48728979815 975.48618993586 39.764 2 0.12206945696522832 0.001655461333153147 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF', 'nc|ENSG00000167657|O43293-2|DAPK3'] 137107 15105 YLDDPTNSWY True H1975_Epitope_Rep1 1272.52988288612 1272.52878993586 63.355 2 0.12206805784161441 0.001655461333153147 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 61533 17835 LLGELLQDNAK True PC9_epitope_Rep1 1212.67140216972 1212.6703099358601 73.397 2 0.12206632443569622 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 31235 12729 GDLPFVVPR True NCI_RA007_Epitope_Rep1 998.5549158654999 998.55380993586 53.498 2 0.1220661893300479 0.001655461333153147 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 89115 12820 REFEMWAP True NCI_RA007_Epitope_Rep5 1064.4749512926398 1064.47384993586 55.994 2 0.12205083472660225 0.001655461333153147 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENSG00000116254|ENST00000262450|CHD5'] 80253 9318 PLDHLKPLEY True H1975_Epitope_Rep1 1223.65502382959 1223.6533649037901 40.748 3 0.12205080037360748 0.001655461333153147 0.9438714419765777 ['ENSG00000135763|ENST00000258243|URB2'] 135734 6570 YEKEGEFVA True H1975_Epitope_Rep3 1070.4920408254197 1070.49094993586 30.228 2 0.12204281461874306 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 58197 6330 LESPHSLPA True H1975_Epitope_Rep2 949.48689587533 949.48578993586 29.281 2 0.12203540581492443 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 43272 10101 IHDGM[Oxidation]NLEL True PC9_epitope_Rep6 1056.49099566004 1056.4898899358602 49.458 2 0.12203061381107377 0.001655461333153147 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 136499 11486 YHISPSSSSL True PC9_epitope_Rep1 1076.5138388991602 1076.51274993586 49.061 2 0.12202889039170077 0.001655461333153147 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 70743 17295 MEALPLLAA True H1975_Epitope_Rep2 927.5099398190299 927.50884993586 71.818 2 0.12202368675232987 0.001655461333153147 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 118466 6523 [Acetylation]-VDREQLVQK True H1975_Epitope_Rep3 1155.62478664677 1155.62368993586 30.058 2 0.12202230186262548 0.001655461333153147 0.9438714419765777 ['ENSG00000170027|ENST00000307630|YWHAG'] 130740 10430 VVDPNDPQM True PC9_epitope_Rep2 1013.44879611445 1013.44768993586 45.439 2 0.1220143938633326 0.001655461333153147 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 415 19998 AALPNVYEV True PC9_epitope_Rep1 974.5072969667399 974.50618993586 81.749 2 0.12201407217395703 0.001655461333153147 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 105252 6557 STSQTFIYK True NCI_RA007_Epitope_Rep3 1073.5393253710097 1073.53822993586 32.844 2 0.12201388960379929 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 37547 20415 GYNVKFDMF True PC9_epitope_Rep3 1119.5059170677498 1119.50480993586 83.78 2 0.12201240299727126 0.001655461333153147 0.9438714419765777 ['ENST00000589115.5_1_19:1105440-1106426:+|nuORF', 'ENST00000588919.5_1_19:1105440-1106636:+|nuORF', 'nc|ENSG00000167468|P36969-2|GPX4', 'ENSG00000167468|ENST00000354171|GPX4'] 94754 15123 RYLPDTLLL True NCI_RA007_Epitope_Rep1 1102.63864548946 1102.63754993586 62.895 2 0.12200760400635129 0.001655461333153147 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 17332 12033 EHDPSSIYL True PC9_epitope_Rep6 1059.48728979815 1059.48618993586 57.579 2 0.12199993839627521 0.001655461333153147 0.9438714419765777 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 71347 12394 MHSIGGVQV True PC9_epitope_Rep1 926.4643866089399 926.46328993586 52.534 2 0.12198920352521214 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant', 'LRBA|p.L476I|1|0.18|ENSG00000198589|chr4:150908401-150908401|G/T|missense_variant'] 120155 11669 VFLENVIR True H1975_Epitope_Rep1 988.5705659296399 988.56946993586 49.874 2 0.12197889863356881 0.001655461333153147 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 132150 8945 VYISEHEHF True PC9_epitope_Rep2 1159.5298233164701 1159.5287299358602 39.764 2 0.12197822057248248 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 113701 11629 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 49.611 2 0.12197165211654941 0.001655461333153147 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 34644 18928 GQISEVVVV True PC9_epitope_Rep3 928.5229470308799 928.52239496793 78.029 1 0.1219705803216295 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 71117 18350 M[Oxidation]ETVWTILP True H1975_Epitope_Rep1 1104.55253328744 1104.55197496793 76.474 1 0.12196552420382116 0.001655461333153147 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 36050 9914 GVDVTGPHLY True H1975_Epitope_Rep2 1056.52400966004 1056.52290993586 43.122 2 0.12196350947264681 0.001655461333153147 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 103132 21711 SQMATILNL True PC9_epitope_Rep1 989.5215671318899 989.52046993586 88.344 2 0.12196204736400287 0.001655461333153147 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 60655 13038 LITPAVVSER True PC9_epitope_Rep3 1083.62880908175 1083.6277099358601 55.177 2 0.1219603920682607 0.001655461333153147 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 132517 20586 VYPEYVIQY True PC9_epitope_Rep2 1172.57537652656 1172.57426993586 84.616 2 0.1219575059423724 0.001655461333153147 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 72252 19557 MRYVASYLLA True PC9_epitope_Rep2 1185.6216155263298 1185.6205099358601 80.608 2 0.12195383257000826 0.001655461333153147 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 31664 7474 GEIASFDKA True NCI_RA007_Epitope_Rep1 936.4552613938799 936.45416993586 33.064 2 0.12195342780560445 0.001655461333153147 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 118627 4066 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 20.726 2 0.12195212920719203 0.001655461333153147 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 129252 5810 VTDPSIPIRK True NCI_RA007_Epitope_Rep4 1124.65535818276 1124.6537249037901 28.972 3 0.12195140852815296 0.001655461333153147 0.9438714419765777 ['ENSG00000102034|ENST00000308167|ELF4'] 91785 7049 RPLEPQPAP True PC9_epitope_Rep3 1003.5450794577899 1003.5439899358599 32.123 2 0.12194431037677336 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 116806 19472 TYLPTSPLL True PC9_epitope_Rep6 1003.55899818643 1003.55847496793 87.563 1 0.12193945210871089 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 23845 17993 EYLPKVTGL True PC9_epitope_Rep5 1018.5698972232999 1018.56880993586 74.226 2 0.12193825652829943 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 68800 18859 LVDQNIFSFY True H1975_Epitope_Rep3 1244.607739284 1244.60664993586 79.101 2 0.12193574898825378 0.001655461333153147 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 76240 11114 NSATGVPTV True PC9_epitope_Rep5 844.42904664604 844.4279499358599 47.74 2 0.12193238037218103 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 34642 18489 GQISEVVVV True PC9_epitope_Rep2 928.5229470308799 928.52184993586 76.453 2 0.12193139556585816 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 95971 3962 SEADKIKVA True NCI_RA007_Epitope_Rep4 959.52876068731 959.52766993586 21.479 2 0.12192656332823298 0.001655461333153147 0.9438714419765777 ['ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000466147.5_1_3:49062090-49062580:-|nuORF', 'ENST00000484872.1_1_3:49061926-49062670:-|nuORF'] 7897 4498 ATASPIVAR True NCI_RA007_Epitope_Rep4 884.50796567308 884.50686993586 23.689 2 0.12192395812459185 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000131725|Q5JSH3-4|WDR44', 'nc|ENSG00000131725|Q5JSH3-2|WDR44', 'ENSG00000131725|ENST00000254029|WDR44'] 19776 5769 ELTAVVQK True NCI_RA007_Epitope_Rep2 886.51238234718 886.51128993586 27.056 2 0.1219235698908433 0.001655461333153147 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF', 'ENST00000407940.1_1_6:7339375-7339741:-|nuORF'] 102824 20119 SQFPGAITL True PC9_epitope_Rep4 932.4967322830399 932.49562993586 85.523 2 0.12192244627884485 0.001655461333153147 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 37738 12065 HAVGDIPGV True PC9_epitope_Rep1 863.45011644379 863.44900993586 51.268 2 0.12191921331625191 0.001655461333153147 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 135841 11111 YEQLSSEALEA True H1975_Epitope_Rep1 1238.56666231766 1238.56607496793 47.704 1 0.1219151156937178 0.001655461333153147 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 76748 19311 NTTDIFQTV True PC9_epitope_Rep4 1037.50293986229 1037.50184993586 82.387 2 0.12191360509065541 0.001655461333153147 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 84621 4619 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 25.074 2 0.12191227468481572 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 75626 10977 NQSDTSVSL True PC9_epitope_Rep3 949.43525422529 949.43414993586 47.209 2 0.12190544474654678 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 101352 9408 SMDEKVELY True H1975_Epitope_Rep3 1112.5059766374 1112.5048699358601 41.188 2 0.12190497616252732 0.001655461333153147 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1'] 4093 11360 AHSPLAAQL True PC9_epitope_Rep1 906.4923156089401 906.49120993586 48.577 2 0.1218968769171048 0.001655461333153147 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 47493 19111 IYKSIMEQF True PC9_epitope_Rep5 1157.57908200801 1157.5779899358602 78.542 2 0.12187677400182931 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2', 'ENSG00000128298|ENST00000381669|BAIAP2L2'] 95612 13908 SATQVYTIL True H1975_Epitope_Rep2 994.53351171458 994.53240993586 58.644 2 0.12187584813474484 0.001655461333153147 0.9438714419765777 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000481241.1_1_3:180491477-180491675:-|nuORF'] 113195 9506 TQDPTAQSL True PC9_epitope_Rep5 959.45598966987 959.45488993586 41.522 2 0.12186568468327803 0.001655461333153147 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 34600 13872 GQHEISFSV True PC9_epitope_Rep2 1002.4770594676199 1002.47596993586 58.641 2 0.12186304736757955 0.001655461333153147 0.9438714419765777 ['ENST00000497929.1_1_3:124951187-125011317:-|nuORF', 'ENSG00000163848|ENST00000360647|ZNF148'] 139900 5377 YVEGVHQQY True H1975_Epitope_Rep3 1121.51417325233 1121.5130699358601 25.749 2 0.12185418729150452 0.001655461333153147 0.9438714419765777 ['ENSG00000062716|ENST00000262291|VMP1', 'VMP1|p.Q104P|1|0.42|ENSG00000062716|chr17:59738844-59738844|A/C|missense_variant'] 101111 22396 SLVELLNQI True PC9_epitope_Rep4 1027.5913609438699 1027.59026993586 94.38 2 0.12185136312406365 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 70013 16355 LYGKIAEAF True PC9_epitope_Rep2 1010.5436824754598 1010.54258993586 68.155 2 0.12184570105095069 0.001655461333153147 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 104963 20773 STIAILNSV True PC9_epitope_Rep3 916.5229470308801 916.52184993586 85.175 2 0.12184288474587318 0.001655461333153147 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 24362 19599 FAEGFVRAL True PC9_epitope_Rep1 1008.5392658013598 1008.53816993586 80.215 2 0.1218342372311925 0.001655461333153147 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 140633 20870 YYPAGTQLF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 85.102 2 0.12182785970418662 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000104413|Q6NXG1-2|ESRP1', 'nc|ENSG00000104413|Q6NXG1-5|ESRP1', 'nc|ENSG00000104413|Q6NXG1-4|ESRP1', 'nc|ENSG00000104413|Q6NXG1-3|ESRP1', 'ENSG00000104413|ENST00000433389|ESRP1'] 6882 10901 AQIKEM[Oxidation]VEL True PC9_epitope_Rep2 1075.55834694387 1075.55724993586 47.25 2 0.12181287271264225 0.001655461333153147 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 140896 21086 YYVGGEIVTI True PC9_epitope_Rep2 1112.57537652656 1112.57426993586 86.564 2 0.12180667321099793 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 37549 20406 GYNVKFDMF True PC9_epitope_Rep5 1119.5059170677498 1119.50480993586 83.529 2 0.12180343783906761 0.001655461333153147 0.9438714419765777 ['ENST00000589115.5_1_19:1105440-1106426:+|nuORF', 'ENST00000588919.5_1_19:1105440-1106636:+|nuORF', 'nc|ENSG00000167468|P36969-2|GPX4', 'ENSG00000167468|ENST00000354171|GPX4'] 43423 12424 IHSPVVNEL True PC9_epitope_Rep2 1006.54474510462 1006.54364993586 53.097 2 0.12179250731519496 0.001655461333153147 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 40459 9671 HSDPSILGY True H1975_Epitope_Rep2 987.46616043075 987.46506993586 42.18 2 0.12178873075568923 0.001655461333153147 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1'] 6605 19291 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 79.424 2 0.12178679785295199 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 3917 10941 AHDGGIYAL True PC9_epitope_Rep4 915.44503106335 915.44392993586 49.854 2 0.12178656426754797 0.001655461333153147 0.9438714419765777 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 43517 11587 IIDENGVHEL True PC9_epitope_Rep4 1137.56660274801 1137.56550993586 52.329 2 0.12178619466130296 0.001655461333153147 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 28663 13194 FSSPHLVQV True PC9_epitope_Rep6 1012.5341804209198 1012.53308993586 62.395 2 0.12178125068602863 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 136177 20435 YGIPAIVKL True PC9_epitope_Rep3 972.60080342876 972.59970993586 83.859 2 0.1217733969671406 0.001655461333153147 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 86810 16855 QRPAVIGDVL True PC9_epitope_Rep1 1066.61349337078 1066.6123899358602 69.657 2 0.1217713588254025 0.001655461333153147 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000463545.1_1_3:154070629-154071064:-|nuORF'] 30163 19841 FYSNIQTVI True PC9_epitope_Rep4 1083.5600608155898 1083.5589699358602 84.449 2 0.12176839478487728 0.001655461333153147 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 48047 19978 KALQFLEEV True PC9_epitope_Rep3 1075.5913609438699 1075.59026993586 82.09 2 0.12175240412487558 0.001655461333153147 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 36838 11726 GVPSTAIREI True PC9_epitope_Rep4 1041.5818588893299 1041.5807699358602 52.864 2 0.12174859220754333 0.001655461333153147 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'nc|ENSG00000123374|P24941-2|CDK2'] 110930 22100 TLATDILM[Oxidation]GV True PC9_epitope_Rep2 1048.547447907 1048.54634993586 90.479 2 0.12172942463840512 0.001655461333153147 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 7086 5364 AQYDQPLEK True NCI_RA007_Epitope_Rep4 1090.5294889632999 1090.52838993586 27.2 2 0.12172595373652548 0.001655461333153147 0.9438714419765777 ['ENSG00000108599|ENST00000225737|AKAP10'] 2121 5901 AELQSRLAA True H1975_Epitope_Rep3 957.5243440132099 957.52324993586 27.708 2 0.1217242226644078 0.001655461333153147 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 102544 12856 SQAIAFQQA True PC9_epitope_Rep5 962.4821448480601 962.48104993586 54.461 2 0.12171742209289735 0.001655461333153147 0.9438714419765777 ['ZCRB1|p.W185Mfs*13|1|0.31|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant', 'ENSG00000139168|ENST00000266529|ZCRB1'] 19310 11788 ELLTTMGDR True PC9_epitope_Rep5 1034.5066453437398 1034.50554993586 50.339 2 0.12171525242763724 0.001655461333153147 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL12A|p.R123G|1|0.11|ENSG00000101608|chr18:3255769-3255769|A/G|missense_variant', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 84603 4803 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 23.845 2 0.12171067836170163 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 105000 11020 STIFYYVQK True NCI_RA007_Epitope_Rep4 1147.5913609438696 1147.59026993586 49.257 2 0.12170446683451029 0.001655461333153147 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 70292 21042 LYPEGLAQL True PC9_epitope_Rep1 1002.5385970950199 1002.53750993586 85.768 2 0.12170164957666003 0.001655461333153147 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 39917 16795 HQLESILAM True PC9_epitope_Rep6 1040.5324661687598 1040.53136993586 77.108 2 0.12170042995949212 0.001655461333153147 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 106845 23100 SYIDVLPEF True PC9_epitope_Rep1 1081.53317736141 1081.53267496793 93.656 1 0.12169964226037475 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 140113 22127 YVPPELITL True PC9_epitope_Rep5 1043.59029831471 1043.58920993586 90.146 2 0.12169747074267957 0.001655461333153147 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 114923 11778 TTEVVNELY True H1975_Epitope_Rep2 1066.51825557326 1066.51714993586 50.378 2 0.1216945968295215 0.001655461333153147 0.9438714419765777 ['ENSG00000113719|ENST00000393784|ERGIC1', 'ERGIC1-RANBP17|1|fusion', 'ERGIC1-RANBP17|2|fusion'] 53294 4745 KTLDQAKAVLK True NCI_RA007_Epitope_Rep4 1213.73942215989 1213.73776490379 24.685 3 0.12169265379939836 0.001655461333153147 0.9438714419765777 ['ENSG00000135372|ENST00000257829|NAT10', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 130459 16297 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 70.644 2 0.12169154896061182 0.001655461333153147 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 3982 21445 AHFDGLIFV True PC9_epitope_Rep3 1017.5283667644899 1017.52726993586 87.779 2 0.1216911467917857 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 88478 13849 RAADVLVYL True H1975_Epitope_Rep2 1018.5811306133398 1018.58002993586 58.416 2 0.12168562977121182 0.001655461333153147 0.9438714419765777 ['ENSG00000126391|ENST00000317568|FRMD8', 'nc|ENSG00000227942|Q9BZ68|FRMD8P1', 'nc|ENSG00000126391|Q9BZ67-3|FRMD8'] 135136 19765 YAQGLLTGV True PC9_epitope_Rep5 920.4967322830399 920.49618496793 81.069 1 0.12168358588954856 0.001655461333153147 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 138305 19540 YRAPELLL True PC9_epitope_Rep1 973.5596668927699 973.55856993586 79.983 2 0.12167252476211532 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'CDK19|p.G207V|2|0.16|ENSG00000155111|chr6:110632056-110632056|C/A|missense_variant', 'ENSG00000155111|ENST00000368911|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'CDK8|p.H300Qfs*3|1|0.14|ENSG00000132964|chr13:26397191-26397192|AT/-|frameshift_variant', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 88992 3502 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 18.384 2 0.12167082034451926 0.001655461333153147 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 6607 19500 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 80.238 2 0.12167028792019467 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 64525 18871 LRDDTSFVF True PC9_epitope_Rep2 1098.53457434374 1098.53346993586 77.952 2 0.121669395939551 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 49456 8686 KITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1246.62273800457 1246.6216499358602 38.341 2 0.12166877596430924 0.001655461333153147 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 126359 11385 VPLAIVNKA True PC9_epitope_Rep2 923.58040233735 923.57930993586 49.114 2 0.12166276497336766 0.001655461333153147 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 138039 4144 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 22.268 2 0.12165880640684369 0.001655461333153147 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 47532 19633 IYLPYLQNW True NCI_RA007_Epitope_Rep4 1208.6229954253201 1208.62188993586 84.836 2 0.12165587207407293 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 51996 11951 KLEATINELV True H1975_Epitope_Rep1 1128.63903941228 1128.6379499358602 50.973 2 0.12165199998632915 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 25988 21028 FGYVDFESA True PC9_epitope_Rep5 1033.4392769765698 1033.43877496793 85.941 1 0.12164480857748908 0.001655461333153147 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 114383 6988 TSDKPLMY True H1975_Epitope_Rep2 953.45281886573 953.45172993586 31.802 2 0.12164031144801829 0.001655461333153147 0.9438714419765777 ['ENSG00000157741|ENST00000473989|UBN2'] 99961 22967 SLINVGLISV True PC9_epitope_Rep1 1013.6120963884499 1013.6115749679301 93.142 1 0.12163346075080493 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 83225 13705 QAALEFHGV True PC9_epitope_Rep2 970.4872302284999 970.48612993586 58.007 2 0.12162897117808334 0.001655461333153147 0.9438714419765777 ['ENSG00000187231|ENST00000428443|SESTD1'] 34913 5559 GQVVTKTAL True NCI_RA007_Epitope_Rep4 915.5389314481899 915.53782993586 27.983 2 0.12162091654212627 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 96150 16458 SEEEAFGILP True H1975_Epitope_Rep2 1090.51825557326 1090.51767496793 68.524 1 0.12160744524793025 0.001655461333153147 0.9438714419765777 ['ENST00000520503.1_1_8:33318275-33319160:-|nuORF', 'ENST00000327671.9_1_8:33311020-33319160:-|nuORF'] 38538 11938 HHEITYVAL True PC9_epitope_Rep2 1081.55564414149 1081.5545499358602 51.242 2 0.12160529125386482 0.001655461333153147 0.9438714419765777 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4', 'EIF2AK4|p.E1573*|1|0.21|ENSG00000128829|chr15:40032223-40032224|-/T|frameshift_variant'] 92226 5212 RQIKPYTL True NCI_RA007_Epitope_Rep3 1017.5971150306499 1017.59600993586 27.503 2 0.12160452626279629 0.001655461333153147 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 64998 7547 LSDGVAVLK True H1975_Epitope_Rep3 900.5280324113199 900.52692993586 34.011 2 0.121602910310149 0.001655461333153147 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 61357 5966 LLEGEETR True NCI_RA007_Epitope_Rep1 945.4767251144499 945.47562993586 27.254 2 0.12159889065289535 0.001655461333153147 0.9438714419765777 ['ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 102930 21134 SQIISLQTL True PC9_epitope_Rep1 1001.5757108797301 1001.5746099358599 86.122 2 0.12159260237320688 0.001655461333153147 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 95397 6976 SAINEVVTR True PC9_epitope_Rep6 987.53490869691 987.53380993586 35.8 2 0.1215890520709759 0.001655461333153147 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 31493 9249 GEEM[Oxidation]PGLSV True H1975_Epitope_Rep2 933.4113483570098 933.4107949679301 40.533 1 0.12158138479523237 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 96981 14117 SEVILPVPA True H1975_Epitope_Rep2 923.53278343859 923.5322349679301 59.455 1 0.12157936604751624 0.001655461333153147 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 4104 12969 AHSVQPLSL True PC9_epitope_Rep3 950.51853035678 950.51742993586 54.912 2 0.1215788870216603 0.001655461333153147 0.9438714419765777 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 123102 10727 VHAQIVSTL True PC9_epitope_Rep4 966.5498304850599 966.54872993586 49.016 2 0.12157542600168054 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 86818 13668 QRPPTIVL True PC9_epitope_Rep1 922.5600012459399 922.55890993586 57.428 2 0.12156926167479803 0.001655461333153147 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 120095 17346 VFHPSQDLVF True PC9_epitope_Rep6 1187.5975089534697 1187.59640993586 79.335 2 0.12156801928194233 0.001655461333153147 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 119144 10236 VEINENLPA True H1975_Epitope_Rep3 997.5080252427299 997.50692993586 44.421 2 0.12156789143523361 0.001655461333153147 0.9438714419765777 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF', 'ENST00000317633.13_2_5:70196496-70197687:+|nuORF'] 106727 12618 SYDPDFNQL True NCI_RA007_Epitope_Rep3 1097.46655435357 1097.46544993586 56.878 2 0.12155676144544415 0.001655461333153147 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 132922 21902 VYTVVDEMF True PC9_epitope_Rep2 1101.5052483614097 1101.5041499358601 89.722 2 0.1215561570485294 0.001655461333153147 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 40006 7426 HQSPATPAF True PC9_epitope_Rep4 954.4559301002199 954.45482993586 35.914 2 0.12154386629715118 0.001655461333153147 0.9438714419765777 ['ENSG00000082516|ENST00000285873|GEMIN5'] 113631 12869 TRDAGYGGLSL True PC9_epitope_Rep6 1108.5512870370399 1108.55018993586 61.021 2 0.12154053866192048 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 85141 10077 QITVNDLPVGR True NCI_RA007_Epitope_Rep5 1210.6669854956199 1210.6658899358602 45.397 2 0.12153746884632927 0.001655461333153147 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 135263 11364 YAYEPADTAL True NCI_RA007_Epitope_Rep3 1112.5026055091198 1112.5015099358602 51.818 2 0.1215361988523764 0.001655461333153147 0.9438714419765777 ['ENSG00000106541|ENST00000419304|AGR2'] 109409 20504 TGPTRFFLF True PC9_epitope_Rep4 1084.5705659296398 1084.56946993586 87.018 2 0.12153297761079832 0.001655461333153147 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 95564 6425 SASGPLHSV True PC9_epitope_Rep1 853.4293809992101 853.42828993586 29.519 2 0.12152397416626727 0.001655461333153147 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 29630 20796 FVLPELPSV True PC9_epitope_Rep6 999.56408356687 999.5635749679301 92.759 1 0.1215198861352862 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 71374 9603 M[Oxidation]IDPSGVSY True H1975_Epitope_Rep2 983.4269984211501 983.42590993586 41.913 2 0.12150595944308995 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3', 'ENST00000555743.1_1_14:58711638-58734239:+|nuORF', 'ENST00000554812.5_1_14:58714534-58734239:+|nuORF'] 43258 19101 IHDGFGFML True PC9_epitope_Rep6 1035.48478770035 1035.4836899358602 86.122 2 0.12149941637893288 0.001655461333153147 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 55042 23437 LALFPGVAL True PC9_epitope_Rep1 899.5480395799099 899.54694993586 94.934 2 0.1214788972958053 0.001655461333153147 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 4137 17545 AHTTVIIDL True PC9_epitope_Rep1 981.5494961318899 981.54838993586 72.28 2 0.12147524644762579 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000138085|Q6UW56-2|ATRAID', 'ENSG00000138085|ENST00000380171|ATRAID', 'nc|ENSG00000138085|Q6UW56-3|ATRAID'] 70926 15069 MELITPISA True H1975_Epitope_Rep1 973.5154191222899 973.51432993586 63.214 2 0.12147197253267562 0.001655461333153147 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 113490 15447 TQSELATAL True PC9_epitope_Rep5 932.4814761417199 932.48036993586 64.426 2 0.12147075222123434 0.001655461333153147 0.9438714419765777 ['ENSG00000138629|ENST00000395081|UBL7'] 74230 14307 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 60.181 2 0.1214674541200995 0.001655461333153147 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 91653 12758 RPFQSLIHA True PC9_epitope_Rep1 1067.58761297611 1067.58650993586 53.947 2 0.12146531532138684 0.001655461333153147 0.9438714419765777 ['ENST00000495277.1_1_22:50705599-50709047:-|nuORF', 'ENSG00000185386|ENST00000330651|MAPK11'] 13 4220 AAAAAAALQAK True NCI_RA007_Epitope_Rep5 955.54507945779 955.5439899358599 22.771 2 0.12146254893364489 0.001655461333153147 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000567229.5_1_15:66791747-66793486:-|nuORF'] 116652 21797 TYIPGTQITF True PC9_epitope_Rep5 1139.58627556343 1139.5851699358602 88.874 2 0.12145796683849178 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 140523 12297 YYITTRVQF True NCI_RA007_Epitope_Rep5 1189.6131590176099 1189.61206993586 53.951 2 0.12145649559525089 0.001655461333153147 0.9438714419765777 ['ENSG00000000938|ENST00000374005|FGR'] 132707 20629 VYSEVAAYEF True PC9_epitope_Rep3 1176.5339056373998 1176.53280993586 84.62 2 0.12144428850311977 0.001655461333153147 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 105180 10859 STNNWVLIK True NCI_RA007_Epitope_Rep4 1073.58694426977 1073.58584993586 48.619 2 0.1214373998737249 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1'] 29309 16516 FVDPNGKISL True PC9_epitope_Rep5 1088.5866099165999 1088.58550993586 68.529 2 0.12143555262373704 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 32834 5596 GIGQDIQPK True NCI_RA007_Epitope_Rep4 954.5134449763399 954.51234993586 28.125 2 0.12143385551250926 0.001655461333153147 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 102488 6875 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 33.665 2 0.12143182851061803 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 75438 8415 NQGPHSPIL True PC9_epitope_Rep2 961.4981292653699 961.49702993586 37.74 2 0.12142639364547206 0.001655461333153147 0.9438714419765777 ['ENSG00000100147|ENST00000255784|CCDC134'] 17464 17654 EHGNFLITV True PC9_epitope_Rep4 1028.52909504048 1028.52857496793 75.932 1 0.12142243565455287 0.001655461333153147 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 104763 11988 STDNSLLGY True H1975_Epitope_Rep2 968.4450906330001 968.44454496793 51.194 1 0.12142121765317765 0.001655461333153147 0.9438714419765777 ['ENSG00000124171|ENST00000371610|PARD6B'] 39790 12287 HQDPQSIFV True PC9_epitope_Rep6 1069.51925863277 1069.5181699358602 58.647 2 0.12141871392651837 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 108818 9757 TEQPPSPLP True H1975_Epitope_Rep2 964.48656152216 964.48601496793 42.519 1 0.1214169780749593 0.001655461333153147 0.9438714419765777 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 7167 11165 ARDDTHYLL True PC9_epitope_Rep3 1102.54072235334 1102.5396299358601 47.946 2 0.12141239842062573 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000485606.1_1_1:11140819-11141291:-|nuORF'] 137168 15167 YLDQMEDLY True H1975_Epitope_Rep1 1188.50089125696 1188.50037496793 63.6 1 0.12140747899610155 0.001655461333153147 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3'] 45417 5411 ISDSEGFK True PC9_epitope_Rep1 881.4130622287299 881.41196993586 25.648 2 0.12140518607054364 0.001655461333153147 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 96249 8995 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 39.55 1 0.12139358487314793 0.001655461333153147 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 32021 6078 GEVDDGARKLV True H1975_Epitope_Rep1 1157.60405088589 1157.6023949037901 28.446 3 0.12137836333829552 0.001655461333153147 0.9438714419765777 ['ENSG00000164024|ENST00000296411|METAP1'] 107440 12217 SYVNHLYVI True NCI_RA007_Epitope_Rep5 1106.5760452329 1106.57494993586 53.646 2 0.12137506062398012 0.001655461333153147 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5', 'nc|ENSG00000136237|Q92565-2|RAPGEF5'] 9630 21552 AYGGAFYAF True PC9_epitope_Rep3 965.42831837005 965.4277649679301 88.194 1 0.12135185700077682 0.001655461333153147 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 70807 11050 MEENFAVEA True H1975_Epitope_Rep1 1038.4328116971399 1038.43227496793 47.466 1 0.12133342312102692 0.001655461333153147 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 8492 4575 ATVETTIAR True NCI_RA007_Epitope_Rep3 960.52400966004 960.52290993586 24.882 2 0.12132892916443744 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 40273 9672 HRNGGLITL True PC9_epitope_Rep2 979.55631284783 979.55520993586 42.541 2 0.12132562235554048 0.001655461333153147 0.9438714419765777 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 72752 9685 NADHTTLLL True NCI_RA007_Epitope_Rep3 996.52400966004 996.52290993586 45.172 2 0.12132558701252569 0.001655461333153147 0.9438714419765777 ['ENSG00000160695|ENST00000621676|VPS11', 'nc|ENSG00000160695|Q9H270|VPS11'] 132580 22435 VYPNWAIGL True PC9_epitope_Rep5 1031.5440168286298 1031.54290993586 91.295 2 0.12132220511667359 0.001655461333153147 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 136571 11584 YHSSGGLEL True PC9_epitope_Rep3 961.4505103666099 961.44940993586 49.572 2 0.12132102016930488 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000463118.1_1_7:91729006-91736737:+|nuORF'] 31724 10839 GEISALTAEA True H1975_Epitope_Rep3 960.47639076128 960.47584496793 46.772 1 0.12131905269406146 0.001655461333153147 0.9438714419765777 ['ENSG00000125968|ENST00000376112|ID1'] 114364 8949 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4440499358602 39.376 2 0.12131898166109563 0.001655461333153147 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 34625 18446 GQIEVVPEV True PC9_epitope_Rep4 968.5178616504398 968.51676993586 79.023 2 0.12131753839042074 0.001655461333153147 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 21810 7473 ESDPAYQQY True H1975_Epitope_Rep2 1099.44581890899 1099.44472993586 33.692 2 0.12131615226713056 0.001655461333153147 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 109623 15701 THDGSILIV True PC9_epitope_Rep5 953.51819600361 953.51708993586 65.4 2 0.12130240331252395 0.001655461333153147 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 35492 9240 GTFLEGVAK True NCI_RA007_Epitope_Rep2 920.4967322830398 920.49562993586 40.552 2 0.12129779000600757 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11', 'ENST00000593233.1_1_19:5894755-5901370:-|nuORF', 'ENSG00000174886|ENST00000308961|NDUFA11'] 95627 5160 SAVEDEGLK True PC9_epitope_Rep1 946.4607406971398 946.4596499358599 24.7 2 0.12129615452237297 0.001655461333153147 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 102357 6934 SPVFTSRSAA True PC9_epitope_Rep5 1021.51925863277 1021.51816993586 31.641 2 0.12129272148509293 0.001655461333153147 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 103455 14693 SRAGLQFPV True PC9_epitope_Rep4 973.53451477409 973.53340993586 64.45 2 0.12128507721489419 0.001655461333153147 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC4|p.R30Q|1|0.07|ENSG00000278463|chr6:26033480-26033480|C/T|missense_variant', 'H2AC13|p.R30P|1|0.16|ENSG00000196747|chr6:27808298-27808298|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 92441 14655 RQVEDLQATF True PC9_epitope_Rep1 1205.6040508858898 1205.6029499358601 61.192 2 0.12128202365546971 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 136881 15433 YIYKDTIQV True PC9_epitope_Rep1 1141.60192562757 1141.60082993586 64.181 2 0.12127775511782178 0.001655461333153147 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 6223 5479 APRGDGVQVSA True PC9_epitope_Rep5 1055.5359713260698 1055.5348699358601 26.084 2 0.12127433191563139 0.001655461333153147 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 84616 5041 QHDPSAVAV True PC9_epitope_Rep4 922.4508447197799 922.44974993586 26.021 2 0.12127231775838164 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 6083 14975 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 62.605 2 0.12127221064639425 0.001655461333153147 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 14104 13876 DSDSVPAFY True H1975_Epitope_Rep3 999.4185415319898 999.41797496793 58.683 1 0.12126688200010818 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 91824 6784 RPNDIM[Oxidation]AEV True PC9_epitope_Rep6 1059.50189469691 1059.5007899358602 34.917 2 0.12125726228091988 0.001655461333153147 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 45240 17221 IRPENVIIY True PC9_epitope_Rep3 1115.6338944621898 1115.63278993586 71.395 2 0.12125692274690658 0.001655461333153147 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 6587 18371 APWKPTWPA True PC9_epitope_Rep3 1052.5443511817998 1052.54324993586 75.874 2 0.12124738706296938 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000150687|O95084-2|PRSS23', 'ENSG00000150687|ENST00000280258|PRSS23'] 6666 8615 AQAPDLQRV True PC9_epitope_Rep1 996.5352430500799 996.53414993586 37.973 2 0.12124197633266286 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 23561 19166 EYAKTFGYTF True PC9_epitope_Rep5 1225.5655401188499 1225.56444993586 78.759 2 0.12123020070312997 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 37288 19560 GVVPQLVKL True PC9_epitope_Rep3 951.6117024656298 951.61060993586 80.472 2 0.12122543764416187 0.001655461333153147 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 13900 17069 DRDPNSLLI True PC9_epitope_Rep5 1041.54547338061 1041.54436993586 70.675 2 0.12121886165723698 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'nc|ENSG00000168477|P22105-2|TNXB', 'ENST00000507684.1_1_6:31976393-31978991:-|nuORF'] 40702 7537 HTQGPVDGSLY True H1975_Epitope_Rep1 1172.5462016565998 1172.5451099358602 33.985 2 0.12121526721866213 0.001655461333153147 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 38711 9862 HHSNLIAGM True PC9_epitope_Rep1 978.47053461854 978.46942993586 42.793 2 0.1212140612598551 0.001655461333153147 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 48763 8296 KEQIDIYEA True H1975_Epitope_Rep2 1107.54480467427 1107.54370993586 36.861 2 0.12121404294454184 0.001655461333153147 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 139488 15723 YTGTPDWLY True H1975_Epitope_Rep2 1114.4971262058598 1114.49657496793 65.649 1 0.12120607537429702 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 109638 12164 THDLEGPPL True PC9_epitope_Rep1 977.4818104948899 977.48070993586 51.652 2 0.12120180755192668 0.001655461333153147 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 87540 19217 QTIQDIVTV True PC9_epitope_Rep4 1015.5549754351499 1015.5544749679301 82.019 1 0.12120025518933719 0.001655461333153147 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF'] 90496 7027 RKAGIFQSV True NCI_RA007_Epitope_Rep4 1004.57671393924 1004.57560993586 33.656 2 0.12119769831006083 0.001655461333153147 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 108499 10695 TEFLFHTA True NCI_RA007_Epitope_Rep3 964.46543215476 964.46432993586 49.116 2 0.12119742377607577 0.001655461333153147 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 9137 19814 AVLTGLVEA True PC9_epitope_Rep5 871.5014833103099 871.5009349679301 81.262 1 0.1211957957961716 0.001655461333153147 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 29717 18262 FVPIKVEQI True PC9_epitope_Rep1 1071.63283183303 1071.6317299358602 75.035 2 0.12119017030915513 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 97607 14543 SHADVVNLL True PC9_epitope_Rep6 966.51344497634 966.51234993586 67.833 2 0.12118915713374435 0.001655461333153147 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 126002 10399 VPAGGAVAVSA True PC9_epitope_Rep5 897.4919812557699 897.49088993586 44.985 2 0.12118863311476313 0.001655461333153147 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 11504 5520 DGGAWGTEQR True NCI_RA007_Epitope_Rep2 1075.46828568907 1075.46718993586 26.087 2 0.1211849770802372 0.001655461333153147 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 25592 10877 FESVSHLI True H1975_Epitope_Rep3 930.4810822188999 930.47998993586 46.921 2 0.1211781249622953 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1'] 69090 16510 LVKDVFISA True PC9_epitope_Rep3 990.57498260374 990.57388993586 68.643 2 0.1211751288783758 0.001655461333153147 0.9438714419765777 ['ENSG00000008018|ENST00000262193|PSMB1'] 113269 10568 TQFGGKRPFGV True PC9_epitope_Rep2 1192.63529144452 1192.6336349037902 45.966 3 0.12117470182236313 0.001655461333153147 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 104493 4365 SSPGGVYATR True NCI_RA007_Epitope_Rep2 993.48795850449 993.48686993586 21.616 2 0.12117391140137879 0.001655461333153147 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 103476 7106 SRAPSTYTY True PC9_epitope_Rep3 1044.48762415132 1044.48652993586 32.342 2 0.12116631487174186 0.001655461333153147 0.9438714419765777 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3', 'nc|ENSG00000130363|Q86UC2-2|RSPH3'] 136648 5849 YIDQEELNK True H1975_Epitope_Rep3 1150.5506183307 1150.5495299358602 27.512 2 0.12116328958127759 0.001655461333153147 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 104424 6653 SSIQGQWPK True NCI_RA007_Epitope_Rep5 1029.5243440132099 1029.5232499358601 32.26 2 0.1211602904053014 0.001655461333153147 0.9438714419765777 ['nc|ENSG00000054267|Q4LE39-4|ARID4B', 'ENST00000491632.5_1_1:235341091-235490234:-|nuORF', 'nc|ENSG00000054267|Q4LE39-3|ARID4B', 'nc|ENSG00000054267|Q4LE39-2|ARID4B', 'ENSG00000054267|ENST00000264183|ARID4B'] 18017 14886 EIIDLVLDR True H1975_Epitope_Rep1 1084.61282466444 1084.61227496793 62.493 1 0.12115682145179267 0.001655461333153147 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 116243 18049 TVVAAIQAV True PC9_epitope_Rep5 870.51746772762 870.51636993586 74.44 2 0.12115510838942982 0.001655461333153147 0.9438714419765777 ['ENSG00000170265|ENST00000610704|ZNF282', 'nc|ENSG00000170265|Q9UDV7-2|ZNF282'] 69365 22382 LVQDILLNV True PC9_epitope_Rep1 1025.6120963884498 1025.61098993586 90.908 2 0.12115446049878496 0.001655461333153147 0.9438714419765777 ['ENSG00000116922|ENST00000486637|C1orf109', 'ENST00000464178.1_1_1:38148797-38151999:-|nuORF'] 81552 19420 PREIEILAM True PC9_epitope_Rep1 1070.5794163611797 1070.57830993586 79.511 2 0.12115156792859792 0.001655461333153147 0.9438714419765777 ['ENSG00000212122|ENST00000390666|TSSK1B'] 28450 12858 FSENERLI True PC9_epitope_Rep2 1006.5083595959 1006.50726993586 54.759 2 0.121148540049662 0.001655461333153147 0.9438714419765777 ['ENST00000502732.5_1_1:179076600-179076849:-|nuORF'] 116676 19081 TYIQKIFRM True PC9_epitope_Rep3 1198.65325000778 1198.65160490379 78.619 3 0.12114152717806077 0.0016838418535731123 0.9438714419765777 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 14819 5956 DYDPVAAR True H1975_Epitope_Rep3 905.42429561877 905.42318993586 27.921 2 0.12111959865554131 0.0016838418535731123 0.9438714419765777 ['ENSG00000101367|ENST00000375571|MAPRE1'] 97844 11839 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 56.745 2 0.1211119893901393 0.0016838418535731123 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 7197 17190 ARDETEFYL True PC9_epitope_Rep5 1142.5244035828598 1142.5233099358602 71.141 2 0.1211093373571159 0.0016838418535731123 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 61348 4183 LLEGEESR True NCI_RA007_Epitope_Rep4 931.4610750503099 931.45996993586 22.395 2 0.12110884958562221 0.0016838418535731123 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 120276 15188 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 66.344 2 0.12108671107688206 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 134400 14243 WTAELGIRHV True PC9_epitope_Rep5 1180.63529144452 1180.6336349037902 59.791 3 0.12107351561532177 0.0016838418535731123 0.9438714419765777 ['ENSG00000108106|ENST00000264552|UBE2S'] 21618 11530 ERSPVIQTL True PC9_epitope_Rep2 1041.58185888933 1041.5807699358602 49.676 2 0.12106991544627994 0.0016838418535731123 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.G10576W|1|0.15|ENSG00000181143|chr19:8939229-8939229|C/A|missense_variant'] 5950 10066 APILVPHTA True PC9_epitope_Rep4 917.5334521449299 917.53234993586 46.386 2 0.12106484834284507 0.0016838418535731123 0.9438714419765777 ['ENSG00000223501|ENST00000445902|VPS52', 'nc|ENSG00000223501|Q8N1B4-2|VPS52'] 97945 17178 SHQLDFNVL True PC9_epitope_Rep6 1071.53490869691 1071.53380993586 78.663 2 0.12106349963729096 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 108030 7676 TDEKIVLSA True H1975_Epitope_Rep3 974.5284263341399 974.5273299358599 34.508 2 0.12106072447410866 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000101353|Q9H579-2|MROH8', 'ENSG00000101353|ENST00000343811|MROH8'] 23896 11340 EYMKHTRLF True PC9_epitope_Rep5 1223.6121134717898 1223.61100993586 48.616 2 0.12105065744814712 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'ENST00000487369.5_1_17:18148865-18149298:-|nuORF', 'ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 139860 15480 YVDPQFLTY True H1975_Epitope_Rep3 1144.54407639828 1144.5429699358601 64.961 2 0.12104761206408321 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 26926 17726 FLGYPITL True H1975_Epitope_Rep3 922.5164050984599 922.5158549679301 74.108 1 0.12104304717736689 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 35828 5264 GTYVSSVPR True NCI_RA007_Epitope_Rep3 964.4977949121999 964.49668993586 27.709 2 0.12102935035536495 0.0016838418535731123 0.9438714419765777 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 17309 12664 EHDPQYAVI True PC9_epitope_Rep1 1070.50327421546 1070.5021699358601 53.583 2 0.12102434606997015 0.0016838418535731123 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 26829 21085 FLEKLLPPV True PC9_epitope_Rep5 1054.6426682407398 1054.6415699358602 86.166 2 0.12101921591508678 0.0016838418535731123 0.9438714419765777 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 34797 5930 GQTGVIRSV True PC9_epitope_Rep4 915.5137793295099 915.51268993586 29.736 2 0.12101883370220738 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 69944 22775 LYEEAFTVF True PC9_epitope_Rep1 1117.53317736141 1117.53208993586 92.413 2 0.12101483617714939 0.0016838418535731123 0.9438714419765777 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 83050 21827 PYLDSFYEY True PC9_epitope_Rep5 1195.5073565363898 1195.50624993586 88.989 2 0.12101095661305136 0.0016838418535731123 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 26373 12216 FIHQHFVEV True PC9_epitope_Rep4 1154.5872786229402 1154.5856249037902 54.808 3 0.1210078823097355 0.0016838418535731123 0.9438714419765777 ['KLHL18|p.S161R|1|0.62|ENSG00000114648|chr3:47330032-47330032|C/A|missense_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 21712 6975 ERYKEVAEL True PC9_epitope_Rep6 1135.5873381925899 1135.58569490379 35.796 3 0.12100254001759743 0.0016838418535731123 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 110052 18447 THYDHVLIEL True PC9_epitope_Rep3 1238.6295373577398 1238.62844993586 76.161 2 0.1210022863064202 0.0016838418535731123 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 13188 16531 DLTDYLM[Oxidation]K True PC9_epitope_Rep4 1013.47394861357 1013.47284993586 71.558 2 0.1209990244594168 0.0016838418535731123 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 119637 7039 VESENYVQA True H1975_Epitope_Rep3 1037.4665543535696 1037.46544993586 32.04 2 0.12099900602506848 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF'] 115636 23444 TVISLLTGL True PC9_epitope_Rep5 915.56408356687 915.5635349679301 95.161 1 0.1209965075243456 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 87476 13637 QTETGTPYMLY True H1975_Epitope_Rep3 1302.5802042068199 1302.57967496793 57.744 1 0.12099643914743893 0.0016838418535731123 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 102014 3169 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 16.216 2 0.12099228274710194 0.0016838418535731123 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 53791 16770 KYFLKPEVL True PC9_epitope_Rep3 1135.6641319613097 1135.66302993586 69.652 2 0.12098670625374155 0.0016838418535731123 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 113380 18572 TQLGPPYHIL True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 76.789 2 0.12098426124864357 0.0016838418535731123 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 86364 9424 QQLGKVVQV True PC9_epitope_Rep2 997.5920296502098 997.59092993586 41.589 2 0.12098139401044822 0.0016838418535731123 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 62782 15822 LMDHTIPEV True PC9_epitope_Rep5 1053.51648175145 1053.5153899358602 65.851 2 0.12098073597006365 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 25602 10838 FETEFNTQP True H1975_Epitope_Rep1 1111.48220441771 1111.48110993586 46.65 2 0.12098042646122038 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 96434 13151 SEIGGITIA True H1975_Epitope_Rep2 859.46509780159 859.46454496793 55.707 1 0.12096866855178039 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000591556.1_1_17:40458135-40460407:+|nuORF', 'ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 35579 13282 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.5172549679301 62.742 1 0.1209582135468638 0.0016838418535731123 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 6945 15526 AQLQDFVRA True PC9_epitope_Rep3 1046.55089311422 1046.5497899358602 64.87 2 0.12095451085331098 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 75560 20097 NQMDGFDTL True PC9_epitope_Rep3 1039.4280606698699 1039.4269699358601 82.555 2 0.12095379932209038 0.0016838418535731123 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 38683 4254 HHSDGSVSL True PC9_epitope_Rep1 937.42535824793 937.42426993586 21.256 2 0.12095054088010568 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 75849 11527 NRDLATPVM True PC9_epitope_Rep5 1015.51206507735 1015.51096993586 49.335 2 0.12095005762331998 0.0016838418535731123 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 113824 9754 TREDAGSYTL True PC9_epitope_Rep1 1111.51456717515 1111.51346993586 42.378 2 0.12094894384632786 0.0016838418535731123 0.9438714419765777 ['ENSG00000204941|ENST00000342951|PSG5', 'ENST00000401992.1_1_19:43687564-43690557:-|nuORF', 'ENST00000600817.5_1_19:43679971-43690557:-|nuORF', 'nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11', 'ENST00000599245.1_1_19:43528837-43530575:-|nuORF', 'ENSG00000242221|ENST00000406487|PSG2', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 17465 17744 EHGNFLITV True PC9_epitope_Rep4 1028.52909504048 1028.52857496793 76.274 1 0.1209367072478029 0.0016838418535731123 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 34810 11165 GQTQYVTNV True PC9_epitope_Rep5 1008.4876241513199 1008.48652993586 47.932 2 0.1209340506792894 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 34589 20071 GQGEVLVYV True PC9_epitope_Rep5 962.5072969667398 962.50618993586 82.256 2 0.12093194646858459 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 103699 8724 SRDTTMYAV True PC9_epitope_Rep2 1042.47534521546 1042.4742499358601 38.919 2 0.1209220150229875 0.0016838418535731123 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA'] 97462 10177 SGHLETVILG True H1975_Epitope_Rep3 1024.5553097883198 1024.5542099358602 44.19 2 0.12092134757670502 0.0016838418535731123 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 138044 5177 YQDPHSTAV True PC9_epitope_Rep5 1016.45632402304 1016.45522993586 24.931 2 0.12090335510255737 0.0016838418535731123 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 106831 19342 SYIALPLTL True NCI_RA007_Epitope_Rep5 989.57973363101 989.57862993586 81.278 2 0.12089707105815764 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 4558 8262 AKVTAEVVL True NCI_RA007_Epitope_Rep3 928.5593325395998 928.55822993586 39.625 2 0.12089131989111869 0.0016838418535731123 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ENST00000481168.1_1_3:128363760-128369658:-|nuORF', 'ENST00000497415.1_1_3:128359957-128369658:-|nuORF'] 73745 7119 NHANGLTL True PC9_epitope_Rep4 838.4297153523801 838.42860993586 34.656 2 0.12088932415391895 0.0016838418535731123 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 83744 6172 QEDDRQLIA True H1975_Epitope_Rep3 1086.53055159246 1086.5294499358602 28.751 2 0.12088509033368999 0.0016838418535731123 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 54201 17167 KYPENFFLL True NCI_RA007_Epitope_Rep2 1169.61209638845 1169.61098993586 71.515 2 0.12088251334531651 0.0016838418535731123 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 8219 7411 ATIEELTEK True NCI_RA007_Epitope_Rep4 1032.5339056373998 1032.53280993586 35.148 2 0.12087955368236289 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON'] 61342 4948 LLEGEEER True NCI_RA007_Epitope_Rep2 973.4716397340098 973.47054993586 23.867 2 0.12087825135841578 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF', 'ENSG00000176619|ENST00000325327|LMNB2', 'ENSG00000113368|ENST00000261366|LMNB1', 'ENST00000504788.5_1_5:126112928-126171953:+|nuORF', 'LMNB1|p.P510Qfs*18|1|0.23|ENSG00000113368|chr5:126826020-126826020|C/-|frameshift_variant'] 87813 9311 QVIKEINQV True PC9_epitope_Rep4 1069.6131590176099 1069.61206993586 43.421 2 0.12087697592787168 0.0016838418535731123 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 35682 4104 GTNPGIITK True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 22.267 2 0.12085450029437628 0.0016838418535731123 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 113393 19975 TQLGPPYHILV True PC9_epitope_Rep1 1236.68665831104 1236.68556993586 81.659 2 0.12085267164838151 0.0016838418535731123 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 75534 21196 NQLDSLMGL True PC9_epitope_Rep4 989.48518162317 989.4846349679301 89.696 1 0.12084761960866613 0.0016838418535731123 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 21707 9353 ERYKEVAEL True PC9_epitope_Rep5 1135.5873381925899 1135.58569490379 40.932 3 0.12084655769311305 0.0016838418535731123 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 89546 3476 RERRDNYVP True NCI_RA007_Epitope_Rep4 1203.6108676018298 1203.60922490379 19.315 3 0.12083690106127612 0.0016838418535731123 0.9438714419765777 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 25539 8979 FEQKGFRLV True H1975_Epitope_Rep2 1122.6185787512197 1122.61748993586 39.492 2 0.12083585868046451 0.0016838418535731123 0.9438714419765777 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF', 'NMT1-NME1|1|fusion'] 125173 15443 VLQALEGLK True PC9_epitope_Rep3 969.5858816406098 969.58478993586 64.555 2 0.1208303300575685 0.0016838418535731123 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 11980 17875 DHTVGVLF True PC9_epitope_Rep4 886.45486747106 886.45376993586 76.795 2 0.12082962418674914 0.0016838418535731123 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 87799 17365 QVIEKFEAL True PC9_epitope_Rep3 1075.5913609438699 1075.59026993586 71.966 2 0.1208295317567266 0.0016838418535731123 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 35756 8310 GTVDVTPFIKK True NCI_RA007_Epitope_Rep3 1203.68632395787 1203.68467490379 39.805 3 0.12082789197591753 0.0016838418535731123 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 138048 21402 YQDPSVLYI True PC9_epitope_Rep1 1096.54407639828 1096.5429699358601 87.157 2 0.12082078549616589 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 132763 17870 VYSPHVLNL True PC9_epitope_Rep3 1040.5654805492 1040.5643899358602 73.934 2 0.12081611288899508 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 77217 18426 NYIDKVRFL True PC9_epitope_Rep5 1166.64479349906 1166.64313490379 75.896 3 0.12081489763202416 0.0016838418535731123 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 9377 21687 AVVEFLTSV True PC9_epitope_Rep2 963.5276980581499 963.5271449679301 88.895 1 0.12080984526237958 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA'] 76125 12159 NRPNLYYEV True PC9_epitope_Rep6 1166.57202248162 1166.57092993586 58.126 2 0.12080782344039062 0.0016838418535731123 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 102475 7907 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 35.779 2 0.12080574969410829 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 26705 7720 FLDESRSTQY True H1975_Epitope_Rep1 1244.567331024 1244.5667749679299 34.658 1 0.12080570455834486 0.0016838418535731123 0.9438714419765777 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 135274 23637 YAYPYIIDF True PC9_epitope_Rep5 1163.5539128059897 1163.55280993586 95.899 2 0.12080025171961452 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000170456|Q6ZUT9-3|DENND5B'] 25438 15312 FELPQTPLA True H1975_Epitope_Rep1 1014.5385970950199 1014.53750993586 64.166 2 0.12079427395559716 0.0016838418535731123 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 43864 17112 ILDEAIYKV True PC9_epitope_Rep2 1062.5961119711399 1062.5950099358602 71.07 2 0.12078659445418158 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 9537 18873 AYAENIALL True PC9_epitope_Rep6 976.5229470308799 976.52239496793 85.243 1 0.12077922833846486 0.0016838418535731123 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 47442 11521 IYIKQIKTF True PC9_epitope_Rep6 1152.6906810623198 1152.6890249037901 55.4 3 0.12077809355000968 0.0016838418535731123 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 35175 15088 GSDEPAFMYY True H1975_Epitope_Rep3 1178.45902644498 1178.45847496793 63.432 1 0.1207779941728537 0.0016838418535731123 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 3922 14533 AHDGSVFTL True PC9_epitope_Rep4 945.4555957470501 945.45448993586 63.816 2 0.12077621264701033 0.0016838418535731123 0.9438714419765777 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4'] 34800 5544 GQTGVIRSV True PC9_epitope_Rep6 915.5137793295099 915.51268993586 29.344 2 0.12077192118065262 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 21211 18156 ERFLSQVL True PC9_epitope_Rep2 990.5498304850599 990.54872993586 75.141 2 0.12076946361149458 0.0016838418535731123 0.9438714419765777 ['ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1'] 95565 6516 SASGPLHSV True PC9_epitope_Rep1 853.4293809992101 853.42828993586 29.867 2 0.12076754050512262 0.0016838418535731123 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 45013 19976 IQLPSVNTV True PC9_epitope_Rep5 969.54949613189 969.54838993586 81.89 2 0.12076188208825656 0.0016838418535731123 0.9438714419765777 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292'] 103579 16204 SRDGMNIVL True PC9_epitope_Rep3 1003.5120650773499 1003.51096993586 67.466 2 0.12075863815949128 0.0016838418535731123 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 37217 21364 GVVDIFQTV True PC9_epitope_Rep4 976.52294703088 976.52184993586 90.344 2 0.12075612049018457 0.0016838418535731123 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 71102 8177 METDPQTISA True H1975_Epitope_Rep3 1091.48049016555 1091.47997496793 36.432 1 0.12074251669127359 0.0016838418535731123 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 103146 18715 SQMPTVIYV True PC9_epitope_Rep6 1036.5263181591597 1036.5252299358601 84.63 2 0.12073442056323229 0.0016838418535731123 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 35622 7508 GTLMWHQMK True NCI_RA007_Epitope_Rep4 1130.5365060033798 1130.53486490379 35.524 3 0.12072308280779225 0.0016838418535731123 0.9438714419765777 ['ENST00000352767.7_2_3:184032446-184033585:+|nuORF', 'ENST00000346169.6_1_3:184032401-184033585:+|nuORF'] 132827 18245 VYTHNLYYL True PC9_epitope_Rep3 1184.5866099165999 1184.58550993586 75.39 2 0.12070919364896512 0.0016838418535731123 0.9438714419765777 ['ENSG00000198954|ENST00000361983|KIFBP'] 119069 7025 VEHGSVALP True H1975_Epitope_Rep2 907.4763311916299 907.4752299358599 31.947 2 0.12069822193096218 0.0016838418535731123 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.I452V|1|0.26|ENSG00000137076|chr9:35720149-35720149|T/C|missense_variant'] 83668 5375 QEAIENGIHSA True H1975_Epitope_Rep2 1167.55201531303 1167.55090993586 25.714 2 0.12069632683393708 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'ENST00000515125.5_1_5:74018372-74021901:-|nuORF'] 64008 5009 LQDAEIAR True NCI_RA007_Epitope_Rep1 914.4821448480599 914.48104993586 23.568 2 0.12069479349455514 0.0016838418535731123 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 116487 10285 TYDKGYQF True PC9_epitope_Rep2 1020.45526139388 1020.45416993586 44.892 2 0.12069309546313607 0.0016838418535731123 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 6797 17509 AQFHPTEDLVV True PC9_epitope_Rep1 1254.6244519773002 1254.62334993586 72.142 2 0.12069083215233668 0.0016838418535731123 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 21235 10786 ERGENYIL True PC9_epitope_Rep4 992.4927095317598 992.49160993586 49.247 2 0.12068535107086233 0.0016838418535731123 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF'] 102593 17951 SQANRLFYL True PC9_epitope_Rep4 1110.5821932425 1110.58108993586 77.101 2 0.12067503289408314 0.0016838418535731123 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 44091 11780 ILMEHIHKL True PC9_epitope_Rep1 1132.64268532408 1132.64104490379 50.183 3 0.12066236583862319 0.0017032361486824968 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 86781 15439 QRMTTQLLL True PC9_epitope_Rep4 1102.6168644990598 1102.61576993586 67.319 2 0.12065712024811694 0.0017032361486824968 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 74131 13389 NHYAEIQVV True PC9_epitope_Rep1 1071.53490869691 1071.53380993586 56.361 2 0.12065535565071464 0.0017032361486824968 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 108349 5071 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 24.588 2 0.12064744594263745 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 46232 8870 ITDSAGHILY True H1975_Epitope_Rep2 1088.55022440788 1088.5496749679298 39.087 1 0.12064374753238777 0.0017032361486824968 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 29466 8100 FVIATSTK True PC9_epitope_Rep2 865.49091862661 865.48982993586 36.515 2 0.12064262785142404 0.0017032361486824968 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 120160 12060 VFLENVIR True NCI_RA007_Epitope_Rep4 988.5705659296399 988.56946993586 53.388 2 0.1206279405847282 0.0017032361486824968 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 98012 7945 SHSSFQASL True PC9_epitope_Rep6 962.44575933934 962.44466993586 40.004 2 0.12062595427314339 0.0017032361486824968 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 30201 18816 FYVPAEPKLAF True PC9_epitope_Rep6 1280.68051030144 1280.6794099358601 85.018 2 0.12062369736009591 0.0017032361486824968 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 64545 13724 LRDENYYQL True PC9_epitope_Rep2 1212.57750178488 1212.57640993586 58.08 2 0.12062223280648886 0.0017032361486824968 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000484393.1_1_1:39751227-39753267:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 82401 20121 PVAEYFSGV True PC9_epitope_Rep5 967.4650978015899 967.46400993586 82.443 2 0.12062183875321676 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 92137 13699 RQAPFLVTL True NCI_RA007_Epitope_Rep4 1043.61276509479 1043.6116699358602 59.917 2 0.1206214955890831 0.0017032361486824968 0.9438714419765777 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 61971 11197 LLLPGELAK True NCI_RA007_Epitope_Rep5 952.5957180483199 952.59462993586 49.703 2 0.12062144541432467 0.0017032361486824968 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 117116 21598 TYSIGFLRF True PC9_epitope_Rep2 1102.5811306133398 1102.58002993586 88.551 2 0.12062045527679821 0.0017032361486824968 0.9438714419765777 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF', 'ENST00000468535.5_1_7:1589488-1590526:-|nuORF', 'ENST00000474813.5_1_7:1589488-1595099:-|nuORF', 'ENSG00000164855|ENST00000297477|TMEM184A'] 87098 5610 QSEREYIRY True H1975_Epitope_Rep2 1242.5992998586198 1242.59764490379 26.581 3 0.1206125486747793 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 72659 20475 MWSPTHPALF True PC9_epitope_Rep2 1185.5641006502099 1185.56300993586 84.186 2 0.12061163906195427 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 114041 18004 TRNDIVNML True PC9_epitope_Rep3 1074.54917886206 1074.5480899358602 74.457 2 0.12060404125478631 0.0017032361486824968 0.9438714419765777 ['ENST00000465772.5_1_10:27793310-27827017:+|nuORF', 'ENSG00000099246|ENST00000356940|RAB18', 'nc|ENSG00000099246|Q9NP72-2|RAB18'] 26537 7693 FIVGADNVGSK True H1975_Epitope_Rep1 1105.57677350889 1105.57566993586 34.553 2 0.12059528140690151 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 76751 20242 NTTDIFQTV True PC9_epitope_Rep5 1037.50293986229 1037.5023749679299 82.91 1 0.12059281617412125 0.0017032361486824968 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 98020 18702 SHSVFSVTI True PC9_epitope_Rep1 975.50254593947 975.50144993586 76.727 2 0.12059187583530111 0.0017032361486824968 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 130467 16933 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 70.148 2 0.12058815408076835 0.0017032361486824968 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 140103 22199 YVPPELITL True PC9_epitope_Rep1 1043.59029831471 1043.58920993586 90.208 2 0.12058340442841886 0.0017032361486824968 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 138868 16608 YSDPNQIWIY True H1975_Epitope_Rep3 1297.59790287629 1297.5968099358602 69.382 2 0.12058311329290698 0.0017032361486824968 0.9438714419765777 ['ENSG00000178234|ENST00000430044|GALNT11'] 71385 10302 MIDVTKSYY True H1975_Epitope_Rep3 1118.5317974624202 1118.5307099358602 44.68 2 0.120581137904586 0.0017032361486824968 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF'] 76175 8881 NRSNTVVIM True PC9_epitope_Rep4 1032.53861417836 1032.53750993586 41.693 2 0.12057853231754521 0.0017032361486824968 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 104918 6585 STFSAPLNK True NCI_RA007_Epitope_Rep4 963.50254593947 963.50144993586 31.955 2 0.1205769163406128 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 115624 21713 TVISILNTI True PC9_epitope_Rep4 972.58554728744 972.58499496793 91.716 1 0.12056338188306252 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 84020 5474 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47687496793 26.078 1 0.12055084122163062 0.0017032361486824968 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 103406 20547 SQYEEQFVTL True PC9_epitope_Rep2 1242.5768330785397 1242.5757299358602 84.467 2 0.12054917958375473 0.0017032361486824968 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 54083 16227 KYMDIEFDF True NCI_RA007_Epitope_Rep5 1206.5267120819797 1206.52560993586 69.164 2 0.12054273146634455 0.0017032361486824968 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000471904.1_1_2:192128111-192215016:+|nuORF', 'MYO1A|p.T562Dfs*32|1|0.09|ENSG00000166866|chr12:57038489-57038490|-/G|frameshift_variant', 'ENSG00000166866|ENST00000300119|MYO1A'] 129834 20123 VTLGPVPEI True PC9_epitope_Rep4 923.53278343859 923.53168993586 85.538 2 0.12053985252262615 0.0017032361486824968 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 24424 4197 FAGDDAPRA True NCI_RA007_Epitope_Rep3 918.4195445915 918.4184499358599 23.15 2 0.12053692948597663 0.0017032361486824968 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 6639 21369 APYPGFLSV True PC9_epitope_Rep2 949.49091862661 949.48982993586 87.665 2 0.12053411594653642 0.0017032361486824968 0.9438714419765777 ['ENSG00000160447|ENST00000291906|PKN3'] 132515 16575 VYPESFREL True PC9_epitope_Rep5 1138.56587447202 1138.56476993586 68.76 2 0.12053202962270193 0.0017032361486824968 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 1319 6386 AEEAARLSVAA True H1975_Epitope_Rep1 1086.56693710118 1086.5658499358601 29.623 2 0.12053083854858292 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 38511 6404 HHDDPEVL True PC9_epitope_Rep5 960.4301092752 960.42900993586 29.609 2 0.12052507792561855 0.0017032361486824968 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 138569 4549 YRPGTVALR True NCI_RA007_Epitope_Rep5 1031.5876129761098 1031.58650993586 24.153 2 0.12052176588355572 0.0017032361486824968 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'H3C13|p.H40Q|1|0.1|ENSG00000183598|chr1:149813562-149813562|G/C|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 75494 23612 NQIPGLIWI True PC9_epitope_Rep1 1052.60186605792 1052.6007699358602 95.614 2 0.12052127065850882 0.0017032361486824968 0.9438714419765777 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000493208.1_1_5:131825047-131826375:-|nuORF', 'ENSG00000125347|ENST00000245414|IRF1'] 96928 4277 SETVMVHQA True NCI_RA007_Epitope_Rep3 1000.4647805317599 1000.46368993586 23.537 2 0.12051907094039763 0.0017032361486824968 0.9438714419765777 ['ENSG00000100647|ENST00000342745|SUSD6'] 22297 10687 ETEDVNLAY True H1975_Epitope_Rep1 1052.4662200004 1052.4651299358602 46.066 2 0.12051843556052873 0.0017032361486824968 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000153767|ENST00000283875|GTF2E1'] 103281 14245 SQTLVSQGL True PC9_epitope_Rep2 931.4974605590301 931.49636993586 60.061 2 0.12051118662115395 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 1148 5913 AEAPSSPDV True H1975_Epitope_Rep2 871.39232678415 871.39177496793 27.731 1 0.12050436496524448 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 44979 17799 IQIMKVEEI True PC9_epitope_Rep2 1101.61038213629 1101.60928993586 73.756 2 0.12050226804080975 0.0017032361486824968 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 96165 13274 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.4074249679301 56.16 1 0.1205007547185397 0.0017032361486824968 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 86565 6638 QRATSNVF True PC9_epitope_Rep5 921.4668291370899 921.4657299358599 30.506 2 0.12049554202298714 0.0017032361486824968 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 115808 10380 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep1 1134.59546072858 1134.5943699358602 44.81 2 0.12049324503459391 0.0017032361486824968 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 26089 16415 FHEGDVITL True PC9_epitope_Rep4 1029.51311062317 1029.51200993586 71.102 2 0.12049034325408285 0.0017032361486824968 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 91814 7433 RPNDIM[Oxidation]AEV True PC9_epitope_Rep2 1059.50189469691 1059.5007899358602 33.966 2 0.12049003158344486 0.0017032361486824968 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 38875 17236 HIIENIVAV True PC9_epitope_Rep2 1006.58113061334 1006.58002993586 71.56 2 0.12048761574001271 0.0017032361486824968 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 34629 17355 GQIEVVPEV True PC9_epitope_Rep6 968.5178616504398 968.51676993586 79.372 2 0.12048713355730747 0.0017032361486824968 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 306 19216 AAIASLLYL True H1975_Epitope_Rep2 933.55351888317 933.55242993586 79.754 2 0.12048588463394354 0.0017032361486824968 0.9438714419765777 ['ENSG00000172992|ENST00000651974|DCAKD'] 25536 5418 FEQGGARVV True H1975_Epitope_Rep3 961.4981292653698 961.49702993586 25.902 2 0.1204856588457641 0.0017032361486824968 0.9438714419765777 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 8929 8479 AVGLVLPAK True NCI_RA007_Epitope_Rep3 866.5589386167799 866.55784993586 40.429 2 0.1204796187807188 0.0017032361486824968 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 34660 23366 GQLDFSEFL True PC9_epitope_Rep1 1054.49712620586 1054.4960299358602 94.658 2 0.12047267103099792 0.0017032361486824968 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 94575 5024 RYIRDAHTF True NCI_RA007_Epitope_Rep4 1177.59924028897 1177.5976049037902 25.813 3 0.12046683737028122 0.0017032361486824968 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 29340 10811 FVDVAQSTY True H1975_Epitope_Rep2 1028.48147614172 1028.4803699358602 46.614 2 0.12046642292106892 0.0017032361486824968 0.9438714419765777 ['ENSG00000187231|ENST00000428443|SESTD1'] 43437 6176 IHSQPQPAL True PC9_epitope_Rep2 989.5294293936498 989.52832993586 29.147 2 0.12046531890998942 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 118809 7570 VEEENIRVV True H1975_Epitope_Rep1 1085.57168812845 1085.5705899358602 34.109 2 0.12046039864281947 0.0017032361486824968 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000475596.1_1_2:190306218-190316629:+|nuORF', 'ENST00000472286.5_1_2:190306218-190320233:+|nuORF'] 110453 15477 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.53308993586 64.683 2 0.12045984150232561 0.0017032361486824968 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 102684 3924 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 21.287 2 0.12043412727071927 0.0017032361486824968 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 90880 8011 RLASTLVHL True NCI_RA007_Epitope_Rep3 1008.6080140675199 1008.60690993586 38.605 2 0.1204238476507233 0.0017032361486824968 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 8801 19326 AVFPDDM[Oxidation]PTL True PC9_epitope_Rep4 1120.51106239828 1120.50996993586 82.445 2 0.12042313365050705 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 30263 8738 GAAKDLPGV True PC9_epitope_Rep3 826.4548674710599 826.45376993586 38.565 2 0.12042286074842354 0.0017032361486824968 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 75871 14536 NRDNVGLVL True PC9_epitope_Rep5 998.5508931142199 998.54978993586 60.911 2 0.12041418824471814 0.0017032361486824968 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 5501 20206 AMSSKFFLV True PC9_epitope_Rep5 1028.5364889200398 1028.5353899358602 82.769 2 0.12041324344184265 0.0017032361486824968 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 102209 6896 SPSPPFGHSA True PC9_epitope_Rep2 982.4508447197801 982.44974993586 31.927 2 0.120409611411755 0.0017032361486824968 0.9438714419765777 ['ENSG00000141232|ENST00000499247|TOB1'] 94568 15612 RYIPTAAAF True PC9_epitope_Rep5 1008.5392658013599 1008.53816993586 65.063 2 0.12040681798970755 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 62159 15840 LLPGKTYSF True PC9_epitope_Rep3 1024.5593325395998 1024.55822993586 66.082 2 0.12040494191394216 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 970 7091 AEAAPPLRP True H1975_Epitope_Rep3 920.50796567308 920.50686993586 32.243 2 0.12040443001789786 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 35118 8406 GRSDTQLVV True PC9_epitope_Rep2 973.5192586327698 973.51816993586 37.705 2 0.12040050024684228 0.0017032361486824968 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 1626 9011 AEFVEVTK True PC9_epitope_Rep1 921.4807478657299 921.47964993586 39.509 2 0.12039694226680142 0.0017032361486824968 0.9438714419765777 ['CON__P02769'] 125174 15488 VLQALEGLK True PC9_epitope_Rep3 969.5858816406098 969.58478993586 64.726 2 0.12039159779340904 0.0017032361486824968 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 75537 20030 NQLDSLMGL True PC9_epitope_Rep6 989.48518162317 989.48408993586 89.712 2 0.12038422069287359 0.0017032361486824968 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 40612 11213 HTDVGLLEY True H1975_Epitope_Rep3 1045.50802524273 1045.5069299358602 48.23 2 0.12038403920095996 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF'] 127323 17899 VQNDTLLQV True PC9_epitope_Rep4 1028.5502244078798 1028.5496749679298 76.887 1 0.12038210762343017 0.0017032361486824968 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 24774 14568 FAYEGPM[Oxidation]YL True H1975_Epitope_Rep2 1105.4790339940098 1105.4779299358602 61.191 2 0.12037607069161788 0.0017032361486824968 0.9438714419765777 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'RNF145|p.P393Lfs*7|1|0.15|ENSG00000145860|chr5:159163023-159163023|G/-|frameshift_variant'] 34646 17782 GQISEVVVV True PC9_epitope_Rep4 928.5229470308799 928.52184993586 76.427 2 0.1203757420761459 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 64520 21527 LRDAVLLVF True PC9_epitope_Rep5 1044.6331661861998 1044.63206993586 87.84 2 0.1203567391651998 0.0017032361486824968 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 139687 11353 YTTDRVMTV True PC9_epitope_Rep3 1084.5222954078802 1084.52118993586 48.673 2 0.12035417545402813 0.0017032361486824968 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 96741 5519 SEQISTAGTEA True H1975_Epitope_Rep3 1092.4934973774 1092.49240993586 26.276 2 0.12035311953101892 0.0017032361486824968 0.9438714419765777 ['ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000532107.2_1_14:51374946-51378571:-|nuORF'] 114059 10159 TRNPVSEEL True PC9_epitope_Rep3 1043.52473793603 1043.52364993586 44.03 2 0.12035254819823424 0.0017032361486824968 0.9438714419765777 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.C424Afs*36|1|0.25|ENSG00000168411|chr16:74636502-74636502|A/-|frameshift_variant'] 14544 14089 DVDLEFLAK True H1975_Epitope_Rep3 1048.54407639828 1048.5429699358601 59.52 2 0.12034679968578454 0.0017032361486824968 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF'] 138185 15101 YQQQQSLAL True PC9_epitope_Rep1 1077.54547338061 1077.54436993586 62.905 2 0.1203439762331105 0.0017032361486824968 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 126922 10090 VPVDTGVAA True PC9_epitope_Rep5 827.4388830537498 827.43833496793 43.794 1 0.12034321711190768 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 42466 2759 IEQSGPPHEP True H1975_Epitope_Rep3 1089.50908787189 1089.50798993586 14.696 2 0.12034073042736572 0.0017032361486824968 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 96458 10168 SEIPLTLHS True H1975_Epitope_Rep2 995.5287606873101 995.52766993586 44.112 2 0.12033742543105769 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 129373 16603 VTEEIFLEY True H1975_Epitope_Rep2 1141.55430672881 1141.5532099358602 69.091 2 0.12033650967669737 0.0017032361486824968 0.9438714419765777 ['ENSG00000100418|ENST00000263256|DESI1', 'ENST00000463886.1_1_22:41998573-42000148:-|nuORF'] 103869 20805 SRLDSVLLL True PC9_epitope_Rep3 1014.6073453611799 1014.60624993586 85.298 2 0.12033095072220289 0.0017032361486824968 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 44028 14560 ILLAELEQLK True H1975_Epitope_Rep1 1168.7067250492798 1168.70562993586 61.211 2 0.12033057145268226 0.0017032361486824968 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 72272 14310 MSDSYLPSYY True H1975_Epitope_Rep1 1224.5008912569601 1224.50037496793 60.23 1 0.12033018803892473 0.0017032361486824968 0.9438714419765777 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2'] 21671 14710 ERVPINDVL True PC9_epitope_Rep4 1053.58185888933 1053.5807699358602 64.516 2 0.12031935753343438 0.0017032361486824968 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 58280 11595 LETEVPVVA True H1975_Epitope_Rep3 955.5226126777098 955.5220649679301 49.731 1 0.1203179842660577 0.0017032361486824968 0.9438714419765777 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 18803 5851 ELDVRDRDGY True H1975_Epitope_Rep2 1236.5734790336 1236.57184490379 27.494 3 0.12031153737022876 0.0017032361486824968 0.9438714419765777 ['ENSG00000187017|ENST00000645284|ESPN'] 70607 20907 MAAAWPLLL True H1975_Epitope_Rep1 984.5466596809199 984.5461149679301 86.863 1 0.1203077616483626 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 21292 16661 ERIQDYDVSL True PC9_epitope_Rep2 1236.5986311522797 1236.5975299358602 69.33 2 0.12030766003449726 0.0017032361486824968 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7', 'ENST00000569448.1_1_16:8993400-8995074:-|nuORF'] 1238 16211 AEDLNLLIA True H1975_Epitope_Rep2 970.53351171458 970.53240993586 67.565 2 0.12030033850765398 0.0017032361486824968 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 92231 6927 RQINVGNAL True NCI_RA007_Epitope_Rep3 983.5512274673898 983.55012993586 34.352 2 0.12029998285173654 0.0017032361486824968 0.9438714419765777 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 40738 10815 HTVEDLVKV True PC9_epitope_Rep6 1038.5709598524597 1038.5698699358602 52.448 2 0.12029487569337073 0.0017032361486824968 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 105823 13328 SVIPQIQKV True PC9_epitope_Rep4 1010.6124307416198 1010.61132993586 59.168 2 0.12029430541138374 0.0017032361486824968 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 110740 18682 TKFGGIVVL True PC9_epitope_Rep4 932.5695033004798 932.56840993586 79.94 2 0.12029100813174774 0.0017032361486824968 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 103611 16348 SRDKTIIMW True PC9_epitope_Rep3 1148.60121443492 1148.59957490379 68.015 3 0.12028980457075684 0.0017032361486824968 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 43500 7609 IIALDGDTK True NCI_RA007_Epitope_Rep2 944.51786165044 944.51676993586 34.22 2 0.1202849181428633 0.0017032361486824968 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 37218 21368 GVVDIFQTV True PC9_epitope_Rep4 976.52294703088 976.52239496793 90.359 1 0.12028362391681027 0.0017032361486824968 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 77273 14513 NYIRITSEI True PC9_epitope_Rep6 1107.59242357303 1107.5913299358601 67.708 2 0.12027813327188239 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 109799 9895 THITAQTAVL True PC9_epitope_Rep4 1053.58185888933 1053.5807699358602 45.713 2 0.12027793322256396 0.0017032361486824968 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 89233 5826 REIVMTQSP True NCI_RA007_Epitope_Rep3 1059.5382798251899 1059.5371899358602 29.895 2 0.1202711097508512 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000243063|A0A075B6H7|IGKV3-7'] 43448 12301 IHSSIVSTL True PC9_epitope_Rep2 955.5338460677501 955.53274993586 52.627 2 0.12026935371435565 0.0017032361486824968 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 104326 11190 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep3 1170.4539414449798 1170.45337496793 48.141 1 0.12026769240679502 0.0017032361486824968 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 33898 19853 GLYEGLTWL True H1975_Epitope_Rep2 1050.53859709502 1050.53807496793 82.348 1 0.12025831353737527 0.0017032361486824968 0.9438714419765777 ['ENSG00000165527|ENST00000298316|ARF6'] 139504 22993 YTIGEVPISFV True PC9_epitope_Rep5 1223.64379043955 1223.64268993586 93.434 2 0.12025705579913122 0.0017032361486824968 0.9438714419765777 ['ENSG00000000419|ENST00000371588|DPM1', 'ENST00000466152.5_1_20:49551671-49557490:-|nuORF'] 24442 17010 FAGMPITL True H1975_Epitope_Rep3 848.44661128648 848.44606496793 71.024 1 0.12025470983668525 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 10019 17830 AYTPFHAVL True PC9_epitope_Rep2 1017.5283667644899 1017.52726993586 73.88 2 0.12024894260892031 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 125957 10249 VPAGGAVAV True PC9_epitope_Rep1 739.42283906679 739.42229496793 44.306 1 0.12023565976231551 0.0017032361486824968 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 137489 21354 YLPPGFLSA True PC9_epitope_Rep1 963.50656869075 963.50546993586 86.97 2 0.12023519539089497 0.0017032361486824968 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 118632 4582 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 22.729 2 0.1202286446884295 0.0017032361486824968 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 48695 7477 KEMENFEAP True H1975_Epitope_Rep2 1093.4750108622898 1093.47390993586 33.708 2 0.1202264685666075 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 117413 10096 VADLVENSY True H1975_Epitope_Rep1 1008.4763907612801 1008.47587496793 43.77 1 0.12022526275292926 0.0017032361486824968 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 41129 11446 HYPLNTVTF True NCI_RA007_Epitope_Rep4 1090.54474510462 1090.54364993586 50.955 2 0.12020279926501275 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 8070 13862 ATEEAPYWTY True H1975_Epitope_Rep2 1229.5240692296898 1229.52347496793 58.465 1 0.12019317311724771 0.0017032361486824968 0.9438714419765777 ['ENST00000546490.1_1_12:102091639-102108044:+|nuORF', 'CHPT1|p.C163Lfs*31|1|0.31|ENSG00000111666|chr12:101714559-101714560|-/T|frameshift_variant', 'nc|ENSG00000111666|Q8WUD6-2|CHPT1', 'ENSG00000111666|ENST00000229266|CHPT1'] 42224 2729 IEHDVVMKA True H1975_Epitope_Rep2 1040.5324661687598 1040.53136993586 14.572 2 0.12018458053456317 0.0017032361486824968 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 135463 8102 YEAQDPEIA True H1975_Epitope_Rep2 1034.4556553166997 1034.45454993586 36.113 2 0.12018154377313325 0.0017032361486824968 0.9438714419765777 ['ENSG00000111678|ENST00000229281|C12orf57'] 113821 5053 TREATQAEI True PC9_epitope_Rep5 1017.5090878718897 1017.50798993586 24.464 2 0.1201732945572796 0.0017032361486824968 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 90947 8831 RLFVGSIPK True NCI_RA007_Epitope_Rep2 1015.6178504752298 1015.61674993586 39.0 2 0.12016591730426322 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 46960 17625 IVMQEVETV True PC9_epitope_Rep5 1046.53179746242 1046.5307099358602 72.806 2 0.12016428632974709 0.0017032361486824968 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 96389 6113 SEHVSPISC True H1975_Epitope_Rep2 957.42258136661 957.42148993586 28.492 2 0.12016330821383453 0.0017032361486824968 0.9438714419765777 ['ENST00000301732.9_1_16:2376069-2378689:-|nuORF'] 63707 17636 LPQLPITNF True H1975_Epitope_Rep3 1041.58588164061 1041.58537496793 73.685 1 0.12015687556688813 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 119985 17759 VFAGVFNTF True NCI_RA007_Epitope_Rep4 1000.50181766348 1000.50072993586 76.876 2 0.12015348805006268 0.0017032361486824968 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 34570 12477 GQFSVLFTK True NCI_RA007_Epitope_Rep1 1025.5545815123298 1025.5534899358602 52.51 2 0.12014896031924836 0.0017032361486824968 0.9438714419765777 ['CON__P12763'] 127460 11585 VQSNRILGV True PC9_epitope_Rep5 984.5716285587998 984.57052993586 49.558 2 0.12014804272274013 0.0017032361486824968 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 116659 10623 TYIPVPAKI True NCI_RA007_Epitope_Rep3 1000.5957180483199 1000.59462993586 48.834 2 0.12014502870872673 0.0017032361486824968 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 140809 16697 YYSPHGHILVL True PC9_epitope_Rep5 1297.68190728377 1297.68025490379 69.229 3 0.12014290043208257 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 77509 15399 NYQGHFHLF True PC9_epitope_Rep2 1161.5355774032498 1161.53392490379 64.513 3 0.12014044426427757 0.0017032361486824968 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 113177 15104 TQDGNIYQL True PC9_epitope_Rep6 1050.4981888350198 1050.49767496793 70.156 1 0.12013310878077207 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 128398 9666 VSDTVVEPY True H1975_Epitope_Rep1 1007.4811417885498 1007.48004993586 42.106 2 0.12012989225747919 0.0017032361486824968 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 9455 5688 AVVVVDDR True PC9_epitope_Rep4 871.4763311916298 871.4752299358599 28.693 2 0.12012342816541421 0.0017032361486824968 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'PSPC1|p.E183Q|1|0.14|ENSG00000121390|chr13:19772369-19772369|C/G|missense_variant'] 10000 7794 AYSVEHNQL True PC9_epitope_Rep2 1059.49852318819 1059.49742993586 35.351 2 0.12011939231704259 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 24439 17163 FAGMPITL True H1975_Epitope_Rep2 848.44661128648 848.44606496793 71.297 1 0.12011839356693821 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 133331 7572 WESPSPPKP True H1975_Epitope_Rep1 1023.5025459394699 1023.50144993586 34.116 2 0.1201183468250169 0.0017032361486824968 0.9438714419765777 ['ENST00000514882.5_1_5:10683562-10761180:-|nuORF', 'ENSG00000112977|ENST00000230895|DAP'] 139637 15101 YTSDYFISY True H1975_Epitope_Rep1 1157.49170647225 1157.4906099358602 63.34 2 0.12010892574026986 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 99085 18054 SLADLQNDEV True PC9_epitope_Rep1 1102.5142328219802 1102.5131299358602 74.239 2 0.12010208069971855 0.0017032361486824968 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF'] 23987 16596 EYPDRIMNTF True PC9_epitope_Rep6 1284.5808729131597 1284.5797699358602 76.29 2 0.12009146034241083 0.0017032361486824968 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 102652 13124 SQDGHQWTL True PC9_epitope_Rep5 1070.4781220967802 1070.4770299358602 55.486 2 0.12008913411580346 0.0017032361486824968 0.9438714419765777 ['ENSG00000185010|ENST00000360256|F8', 'nc|ENSG00000185010|P00451-2|F8'] 5732 14428 APDAKSFVL True PC9_epitope_Rep4 946.5123823471799 946.51128993586 63.406 2 0.12008607677424568 0.0017032361486824968 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF'] 87049 7216 QSDPTQSGMY True H1975_Epitope_Rep3 1112.44443901 1112.44387496793 32.728 1 0.12007798138068525 0.0017032361486824968 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 44703 22180 IPNSIMTILEA True PC9_epitope_Rep4 1200.6424105405601 1200.6413099358601 93.558 2 0.12007455007606425 0.0017032361486824968 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF', 'ENST00000598364.1_1_19:46318820-46320367:-|nuORF'] 31727 10981 GEISALTAEA True NCI_RA007_Epitope_Rep5 960.47639076128 960.47584496793 48.875 1 0.12005862624838734 0.0017032361486824968 0.9438714419765777 ['ENSG00000125968|ENST00000376112|ID1'] 38502 4356 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 23.199 2 0.12005604187678967 0.0017032361486824968 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 102682 3759 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 20.603 2 0.12003432609136991 0.0017032361486824968 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 87295 22256 QSVDLVFPV True PC9_epitope_Rep1 1002.5385970950199 1002.53750993586 90.426 2 0.12003182602104864 0.0017032361486824968 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 49521 8410 KKFENEIIL True NCI_RA007_Epitope_Rep3 1132.6492101731599 1132.64755490379 40.171 3 0.12002788038040398 0.0017032361486824968 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.D1124Y|1|0.33|ENSG00000134516|chr5:170019097-170019097|G/T|missense_variant'] 102125 6630 SPQQPGLSA True PC9_epitope_Rep6 883.4399456829099 883.43884993586 34.219 2 0.12002728232450426 0.0017032361486824968 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 34769 22096 GQSELTLLL True PC9_epitope_Rep2 972.54916177872 972.54806993586 90.464 2 0.12002227976931985 0.0017032361486824968 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 63958 7155 LQAEIDNIK True H1975_Epitope_Rep1 1042.56587447202 1042.56476993586 32.545 2 0.12001696199096419 0.0017032361486824968 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 133218 7428 WEDEGVRAC True H1975_Epitope_Rep2 1063.4392940599098 1063.43818993586 33.517 2 0.12001521725984514 0.0017032361486824968 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 33700 9262 GLQFPVGR True H1975_Epitope_Rep1 872.4868363056798 872.48572993586 40.538 2 0.12001388640491706 0.0017032361486824968 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'H2AC21|p.R33G|1|0.15|ENSG00000184270|chr1:149887820-149887820|G/C|missense_variant', 'H2AC11|p.A22P|1|0.21|ENSG00000278677|chr6:27133135-27133135|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 113718 11644 TRDETNYGIP True PC9_epitope_Rep5 1164.5411162761598 1164.54000993586 49.784 2 0.12001232805543692 0.0017032361486824968 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 68408 12667 LTTEVHPEL True PC9_epitope_Rep1 1037.5393253710097 1037.53822993586 53.595 2 0.12001195560176336 0.0017032361486824968 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 69949 20624 LYEEAFTVF True PC9_epitope_Rep6 1117.53317736141 1117.53208993586 92.063 2 0.12000966852617367 0.0017032361486824968 0.9438714419765777 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 71610 20583 MLLDVMHTV True PC9_epitope_Rep5 1057.5300236406101 1057.52892993586 84.22 2 0.1200092566015202 0.0017032361486824968 0.9438714419765777 ['PARN|p.F419Lfs*7|1|0.37|ENSG00000140694|chr16:14580879-14580879|A/-|frameshift_variant', 'nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN'] 29349 17242 FVEEEEHFL True PC9_epitope_Rep2 1177.52915461013 1177.52804993586 71.583 2 0.12000684224851435 0.0017032361486824968 0.9438714419765777 ['ENSG00000168159|ENST00000305943|RNF187'] 40806 7646 HVIETLIGK True NCI_RA007_Epitope_Rep1 1008.5967806774798 1008.59568993586 33.735 2 0.12000560732015676 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 113370 20893 TQLESSWEL True PC9_epitope_Rep1 1091.51350454599 1091.5124099358602 85.186 2 0.12000132973695798 0.0017032361486824968 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 108598 11736 TEIIILATR True NCI_RA007_Epitope_Rep2 1028.62299542532 1028.62188993586 50.247 2 0.11999770125277277 0.0017032361486824968 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 19957 13054 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep2 1154.4801561928198 1154.47957496793 55.334 1 0.11999275768914826 0.0017032361486824968 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 3250 5117 AGFAGDDAPR True PC9_epitope_Rep4 975.4410083120698 975.43990993586 26.339 2 0.11999274030686416 0.0017032361486824968 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 73834 9135 NHDYSYTV True PC9_epitope_Rep5 997.4141248578901 997.41302993586 40.083 2 0.11998793686912682 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant'] 7214 11291 ARDFTVSAM True PC9_epitope_Rep4 996.4698659121999 996.46876993586 51.208 2 0.11998464103087399 0.0017032361486824968 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 94077 12918 RVVDLLNQA True PC9_epitope_Rep6 1026.5821932425 1026.58108993586 61.225 2 0.1199844755508424 0.0017032361486824968 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 40497 13591 HSEVVAIL True PC9_epitope_Rep4 866.4861675993399 866.48506993586 60.171 2 0.11998003382648995 0.0017032361486824968 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 108681 9555 TELQPALSA True H1975_Epitope_Rep1 928.4865615221598 928.48601496793 41.678 1 0.1199761791844122 0.0017032361486824968 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000551842.5_1_12:57881873-57883359:+|nuORF', 'ENST00000553162.5_1_12:57881873-57883795:+|nuORF'] 4713 16648 ALDSTNVEL True PC9_epitope_Rep2 960.47639076128 960.47528993586 69.28 2 0.11997446152295548 0.0017032361486824968 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 86634 13927 QRELDTVTL True PC9_epitope_Rep1 1073.57168812845 1073.5705899358602 58.405 2 0.11997432592701307 0.0017032361486824968 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 64572 8949 LRDQSAVVV True PC9_epitope_Rep1 985.5556441414899 985.55454993586 39.265 2 0.11997186189505236 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 21561 16583 ERSDTFINL True PC9_epitope_Rep4 1093.54038800017 1093.53928993586 71.762 2 0.11997155776996357 0.0017032361486824968 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 32124 6009 GEYRGSDFTA True NCI_RA007_Epitope_Rep5 1101.47270236317 1101.4716099358602 29.798 2 0.11996520569449654 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 138764 10454 YSDASGFGY True H1975_Epitope_Rep1 965.37667672001 965.3761249679301 45.166 1 0.11995853377780664 0.0017032361486824968 0.9438714419765777 ['ENSG00000090006|ENST00000396819|LTBP4', 'nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4'] 102522 17179 SQADVIPAV True PC9_epitope_Rep3 898.4759968384599 898.47488993586 71.236 2 0.1199565947930417 0.0017032361486824968 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 102049 7954 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 35.958 2 0.11995274832277476 0.0017032361486824968 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 130685 14428 VVDEIFNEY True H1975_Epitope_Rep3 1126.51825557326 1126.51767496793 60.852 1 0.11994511240754954 0.0017032361486824968 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 35620 6765 GTLMWHQMK True NCI_RA007_Epitope_Rep3 1130.5365060033798 1130.53486490379 33.704 3 0.11994309347097216 0.0017032361486824968 0.9438714419765777 ['ENST00000352767.7_2_3:184032446-184033585:+|nuORF', 'ENST00000346169.6_1_3:184032401-184033585:+|nuORF'] 138390 11879 YRDPGAVDL True PC9_epitope_Rep5 1004.4927095317598 1004.49160993586 50.69 2 0.11993956222737617 0.0017032361486824968 0.9438714419765777 ['ENST00000577240.1_1_17:73264046-73266276:-|nuORF', 'nc|ENSG00000125457|A9UHW6-2|MIF4GD', 'nc|ENSG00000125457|A9UHW6-3|MIF4GD'] 136810 18097 YITERIIAV True PC9_epitope_Rep1 1076.62299542532 1076.62188993586 74.403 2 0.11993849121092906 0.0017032361486824968 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 115583 19612 TVIATNILL True PC9_epitope_Rep6 956.59063266788 956.58952993586 88.098 2 0.11993771504642485 0.0017032361486824968 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 54302 16906 KYPSPFFVF True NCI_RA007_Epitope_Rep5 1130.5800679841798 1130.5789699358602 71.787 2 0.11993765898159049 0.0017032361486824968 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 112921 22747 TPQSIFIFA True PC9_epitope_Rep3 1022.5436824754598 1022.5425899358601 92.763 2 0.11993249140138529 0.0017032361486824968 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 22998 6463 EVISDEHGID True NCI_RA007_Epitope_Rep4 1112.4985827578398 1112.4974899358601 31.458 2 0.11993248267262632 0.0017032361486824968 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 113260 22195 TQFADMISL True PC9_epitope_Rep1 1024.4899326504399 1024.4888299358602 90.193 2 0.11992882031706471 0.0017032361486824968 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 114197 16013 TRVDLVTMV True PC9_epitope_Rep6 1032.5637662970398 1032.5626699358602 73.915 2 0.11992781215770361 0.0017032361486824968 0.9438714419765777 ['ENSG00000172890|ENST00000319023|NADSYN1'] 43431 13261 IHSPVVNEL True PC9_epitope_Rep5 1006.54474510462 1006.54364993586 56.019 2 0.11992087703952059 0.0017032361486824968 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 105496 13519 SVDDGITLY True H1975_Epitope_Rep3 981.46549172441 981.46494496793 57.28 1 0.11991904343726491 0.0017032361486824968 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 124641 20790 VLIENVASL True PC9_epitope_Rep3 956.5542471591599 956.55369496793 85.24 1 0.11991900398993603 0.0017032361486824968 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 37985 9428 HEGPVWQV True H1975_Epitope_Rep2 950.46101548066 950.45990993586 41.232 2 0.11991821742498374 0.0017032361486824968 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 39759 8546 HPYPPGPGV True PC9_epitope_Rep1 919.4552018242299 919.45410993586 37.709 2 0.1199174365141482 0.0017032361486824968 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 101857 7233 SPKQILDPA True PC9_epitope_Rep6 967.5338460677499 967.53274993586 36.936 2 0.11991683343664129 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant'] 1867 13891 AEIGAVTLV True H1975_Epitope_Rep2 871.50148331031 871.50038993586 58.576 2 0.1199089594582687 0.0017032361486824968 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 88856 5081 REAEFTKSIA True H1975_Epitope_Rep2 1150.59823722946 1150.5965849037902 24.627 3 0.11990279183272413 0.0017032361486824968 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 6461 9646 APTAEGLAA True PC9_epitope_Rep1 799.4075829254699 799.40703496793 41.959 1 0.11990164332114495 0.0017032361486824968 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 10049 18802 AYVGDLQTL True PC9_epitope_Rep4 978.5022115863 978.5016649679301 80.407 1 0.1199011925839853 0.0017032361486824968 0.9438714419765777 ['ENSG00000065802|ENST00000264607|ASB1'] 49410 18630 KILPTLEAV True PC9_epitope_Rep1 982.60628273202 982.60518993586 76.448 2 0.1199010846527564 0.0017032361486824968 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 7556 18440 ASFNDTFVHV True PC9_epitope_Rep5 1135.5298233164701 1135.5287299358602 75.95 2 0.11988798366908623 0.0017032361486824968 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 132586 12887 VYPPPHQVF True PC9_epitope_Rep1 1082.5549158654999 1082.55380993586 54.444 2 0.11988591886156434 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 85147 13360 QITVNDLPVGR True PC9_epitope_Rep6 1210.6669854956199 1210.6658899358602 63.051 2 0.11988507862158392 0.0017032361486824968 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 98058 18449 SHTSVPLLL True PC9_epitope_Rep5 965.55458151233 965.55348993586 75.985 2 0.1198792255397206 0.0017032361486824968 0.9438714419765777 ['ENSG00000136840|ENST00000335791|ST6GALNAC4', 'ENST00000495983.1_1_9:130672770-130677033:-|nuORF', 'nc|ENSG00000184005|Q8NDV1-2|ST6GALNAC3', 'ENSG00000184005|ENST00000328299|ST6GALNAC3'] 6851 3897 AQIENSAAVEK True NCI_RA007_Epitope_Rep4 1158.5880664685799 1158.58696993586 21.21 2 0.11987810390670414 0.0017032361486824968 0.9438714419765777 ['ENSG00000162645|ENST00000370466|GBP2'] 21755 8026 ESDAPGPVY True H1975_Epitope_Rep2 933.40797684829 933.4074249679301 35.82 1 0.11987489027281988 0.0017032361486824968 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 40566 21314 HSSVIFIF True PC9_epitope_Rep1 948.5069030439199 948.50580993586 86.812 2 0.11987334761041094 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 68697 22525 LVDDNYFYL True PC9_epitope_Rep5 1160.5389910178399 1160.5378899358602 91.646 2 0.11986783921622603 0.0017032361486824968 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 105966 11122 SVLGQLGITK True NCI_RA007_Epitope_Rep3 1014.6073453611799 1014.60624993586 50.85 2 0.11986420356876204 0.0017032361486824968 0.9438714419765777 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1', 'nc|ENSG00000197249|P01009-2|SERPINA1'] 130469 17115 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 70.855 2 0.11986197875521697 0.0017032361486824968 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 21675 13936 ERVPINDVL True PC9_epitope_Rep6 1053.58185888933 1053.5807699358602 65.449 2 0.1198578862203535 0.0017032361486824968 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 70122 16795 LYKDVRDLL True PC9_epitope_Rep2 1133.6444591458899 1133.64280490379 69.849 3 0.11984630098649983 0.0017032361486824968 0.9438714419765777 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1', 'ANKZF1|p.T270S|1|0.12|ENSG00000163516|chr2:219233422-219233422|A/T|missense_variant'] 53599 18867 KVVNIVPVI True PC9_epitope_Rep2 979.6430025939098 979.64190993586 77.937 2 0.11984589005503939 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 25430 10462 FELFADKVPK True H1975_Epitope_Rep3 1192.6492101731599 1192.64755490379 45.304 3 0.11984203267826658 0.0017032361486824968 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA'] 105380 15173 SVAAQLTGV True PC9_epitope_Rep2 844.4654321547599 844.46432993586 63.619 2 0.11983826898617288 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 76172 10420 NRSNTVVIM True PC9_epitope_Rep1 1032.53861417836 1032.53750993586 44.967 2 0.11983788209279096 0.0017032361486824968 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 8157 8638 ATFPLSVQK True NCI_RA007_Epitope_Rep3 989.55458151233 989.55348993586 41.052 2 0.11982807615580328 0.0017032361486824968 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 2730 8606 AETSPAPIP True H1975_Epitope_Rep3 881.44944773745 881.4488949679301 38.094 1 0.11982519758528738 0.0017032361486824968 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 115154 23010 TVADVVLWSV True PC9_epitope_Rep5 1087.59136094387 1087.59077496793 93.498 1 0.11982498445729002 0.0017032361486824968 0.9438714419765777 ['ENSG00000106305|ENST00000223029|AIMP2', 'nc|ENSG00000106305|Q13155-2|AIMP2'] 37978 10414 HEGLPGLAV True H1975_Epitope_Rep1 891.4814165720699 891.48030993586 45.009 2 0.11982237366739583 0.0017032361486824968 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 21759 10274 ESDDGVVVY True H1975_Epitope_Rep2 981.4291062156899 981.42855496793 44.525 1 0.11982059542457009 0.0017032361486824968 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 125967 9349 VPAGGAVAV True PC9_epitope_Rep4 739.42283906679 739.42229496793 43.567 1 0.11981987978179433 0.0017032361486824968 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 135469 10061 YEATPIPEA True H1975_Epitope_Rep2 989.4705771048498 989.47002496793 43.692 1 0.11981865959942377 0.0017032361486824968 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 109659 5319 THDQAVQAL True PC9_epitope_Rep6 981.4879585044899 981.48686993586 28.293 2 0.11981586029781624 0.0017032361486824968 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 107374 20536 SYSMIVNNL True PC9_epitope_Rep3 1039.50083168731 1039.4997299358602 84.255 2 0.11981089612141187 0.0017032361486824968 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 25599 10625 FETAVAPNV True H1975_Epitope_Rep2 946.4759968384599 946.47488993586 45.892 2 0.11980675412270717 0.0017032361486824968 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 77454 19551 NYNQHAMVFF True PC9_epitope_Rep2 1269.5600778989299 1269.5589899358602 80.586 2 0.11979838332018151 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'ENST00000470902.5_1_9:130912815-130915395:+|nuORF', 'ENST00000488391.5_1_9:130913785-130915395:+|nuORF'] 30192 20068 FYVGHIDAF True PC9_epitope_Rep3 1067.50763131991 1067.50652993586 82.441 2 0.11979440509505393 0.0017032361486824968 0.9438714419765777 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 113639 14479 TRDDSPLYI True PC9_epitope_Rep2 1078.5294889632999 1078.52838993586 60.962 2 0.11978840217324423 0.0017032361486824968 0.9438714419765777 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 135551 6401 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52897496793 29.545 1 0.119783159061643 0.0017032361486824968 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 1505 10821 AEEPGTFAV True H1975_Epitope_Rep3 919.4287122928699 919.42816496793 46.702 1 0.11978108486352279 0.0017032361486824968 0.9438714419765777 ['ENSG00000188419|ENST00000357749|CHM'] 77281 19685 NYISGIQTI True PC9_epitope_Rep2 1007.52876068731 1007.52766993586 81.104 2 0.11977513270020984 0.0017032361486824968 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 36563 19773 GVLDTLTKV True PC9_epitope_Rep5 944.55424715916 944.55314993586 81.102 2 0.11977096376833471 0.0017032361486824968 0.9438714419765777 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 54334 6065 KYQEVTNNL True NCI_RA007_Epitope_Rep3 1107.5560380643099 1107.55547496793 30.839 1 0.11976899124542402 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 14796 23070 DYATIFNNL True PC9_epitope_Rep1 1069.5080252427301 1069.5069299358602 93.539 2 0.11976163918612906 0.0017032361486824968 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 7471 7808 ASDPYQVHV True H1975_Epitope_Rep3 1014.4770594676198 1014.47596993586 35.016 2 0.11975583338513615 0.0017032361486824968 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 1383 8234 AEEFKVPAA True H1975_Epitope_Rep1 960.4916469025998 960.49109496793 36.616 1 0.11975148537886636 0.0017032361486824968 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 130419 11202 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.49037496793 49.974 1 0.11974715949949 0.0017032361486824968 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 70755 6768 MEDAKVYVA True H1975_Epitope_Rep3 1024.4899326504399 1024.4888299358602 30.988 2 0.11974120376490757 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 105397 8638 SVADTVARV True PC9_epitope_Rep6 916.4977949121999 916.49668993586 43.045 2 0.11973999503188647 0.0017032361486824968 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 119511 14418 VEQPTPFLP True H1975_Epitope_Rep2 1026.5385970950197 1026.53750993586 60.61 2 0.1197346920240497 0.0017032361486824968 0.9438714419765777 ['ENSG00000106397|ENST00000223127|PLOD3'] 138142 19403 YQLEIPENFTT True PC9_epitope_Rep6 1353.6452469915296 1353.64414993586 87.288 2 0.11973265498887661 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 969 6014 AEAAPPLRP True H1975_Epitope_Rep3 920.50796567308 920.50686993586 28.145 2 0.11973147469072448 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 9386 14631 AVVESMVTA True PC9_epitope_Rep3 905.4528188657299 905.45172993586 61.411 2 0.1197271900148438 0.0017032361486824968 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 94938 10312 RYPDSHQLF True PC9_epitope_Rep4 1161.55670677065 1161.5550749037902 47.352 3 0.11972357658101827 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 47918 20766 IYVPVSLGF True PC9_epitope_Rep6 993.55351888317 993.55242993586 92.635 2 0.1197210355283682 0.0017032361486824968 0.9438714419765777 ['ENSG00000172818|ENST00000335987|OVOL1'] 113386 17778 TQLGPPYHIL True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 76.411 2 0.11971881414814035 0.0017032361486824968 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 135770 8229 YENEVALR True PC9_epitope_Rep3 992.4927095317598 992.49160993586 36.632 2 0.11971850997239941 0.0017032361486824968 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 136105 13294 YGEPGEVFINK True PC9_epitope_Rep4 1251.6135529404298 1251.61244993586 59.032 2 0.11970920498754165 0.0017032361486824968 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 130547 20118 VTYGFPIML True H1975_Epitope_Rep2 1039.5412399473098 1039.54067496793 83.372 1 0.11969536047195659 0.0017032361486824968 0.9438714419765777 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF'] 136369 13112 YHDIAQQAF True PC9_epitope_Rep3 1091.50360856863 1091.5025099358602 55.457 2 0.11968988145596048 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 14902 15470 DYKESFNTI True PC9_epitope_Rep5 1115.5135045459901 1115.5124099358602 64.516 2 0.11968619368028 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 124976 15774 VLNEYFHNV True PC9_epitope_Rep2 1133.5505587610498 1133.54946993586 65.938 2 0.11968579222077991 0.001733217785480968 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 110842 7156 TKTPSSDVL True PC9_epitope_Rep5 946.4971262058599 946.49602993586 32.495 2 0.1196844737424914 0.001733217785480968 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16871803-16876886:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000398588.2_1_6:58446590-58447106:-|nuORF'] 74350 15582 NIRDSWEEV True PC9_epitope_Rep5 1146.5305515924601 1146.5294499358602 64.946 2 0.1196812945848001 0.001733217785480968 0.9438714419765777 ['ENSG00000221944|ENST00000408957|TIGD1'] 70407 18436 LYQHEINLF True PC9_epitope_Rep4 1175.5975089534697 1175.59640993586 78.983 2 0.11966930808179185 0.001733217785480968 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 95342 7486 SAGPAIKL True H1975_Epitope_Rep2 755.45413919507 755.45304993586 33.743 2 0.1196666728643093 0.001733217785480968 0.9438714419765777 ['ENSG00000166897|ENST00000402918|ELFN2'] 91550 19011 RPAGALVALVV True PC9_epitope_Rep4 1064.67061432408 1064.66950993586 81.219 2 0.11964000598873403 0.001733217785480968 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 70802 9551 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42717496793 41.746 1 0.11963669406777001 0.001733217785480968 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 132227 18178 VYKPVSIYL True PC9_epitope_Rep2 1080.6219327961599 1080.62082993586 75.227 2 0.11962132739139478 0.001733217785480968 0.9438714419765777 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 86625 6013 QREAEQSNVAL True PC9_epitope_Rep2 1243.61567819875 1243.61458993586 28.52 2 0.11961406700927923 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 55470 8383 LAVDKSASL True PC9_epitope_Rep4 902.50729696674 902.50618993586 39.703 2 0.11961027213246192 0.001733217785480968 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 132853 21646 VYTPVDSLVF True PC9_epitope_Rep4 1138.5910265906998 1138.58992993586 91.452 2 0.11960896214051625 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000541318.1_1_12:121954314-121973995:-|nuORF', 'KDM2B|p.I399Mfs*82|1|0.34|ENSG00000089094|chr12:121510014-121510017|GTCT/-|frameshift_variant', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 120167 16925 VFLENVIR True PC9_epitope_Rep4 988.5705659296399 988.56946993586 73.089 2 0.11960305897739734 0.001733217785480968 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 36648 18384 GVLPNIQAV True PC9_epitope_Rep6 909.5283667644899 909.52726993586 83.358 2 0.11959615853532429 0.001733217785480968 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 48907 7100 KEVEQFTQVA True NCI_RA007_Epitope_Rep3 1177.5979028762902 1177.5968099358602 35.042 2 0.11959429754678289 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 106441 16372 SVVAAVQGL True PC9_epitope_Rep6 842.48616759934 842.48506993586 75.361 2 0.11958267094423648 0.001733217785480968 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 95652 11253 SAVPPGTSL True PC9_epitope_Rep4 827.43888305375 827.43778993586 51.058 2 0.11957833994770857 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 45243 16989 IRPENVIIY True PC9_epitope_Rep5 1115.6338944621898 1115.63278993586 70.367 2 0.11957400939213214 0.001733217785480968 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 43616 18116 IIIPEIQKV True PC9_epitope_Rep4 1051.66413196131 1051.66302993586 77.748 2 0.11956483334394127 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF', 'CSE1L|p.G835E|1|0.3|ENSG00000124207|chr20:49094196-49094196|G/A|missense_variant'] 138233 14083 YQTEIGQTL True PC9_epitope_Rep6 1051.51858992643 1051.51748993586 66.043 2 0.11956399946510758 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 52318 10577 KPANVFITA True PC9_epitope_Rep4 959.54401682863 959.54290993586 48.423 2 0.11956145834653008 0.001733217785480968 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 71162 5803 MEVKPSSVTA True H1975_Epitope_Rep3 1047.52704643515 1047.5259499358601 27.344 2 0.11955715184619078 0.001733217785480968 0.9438714419765777 ['BTG3|p.P193Afs*29|1|0.14|ENSG00000154640|chr21:17594276-17594277|-/T|frameshift_variant', 'ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 77413 23034 NYMEVVSLL True PC9_epitope_Rep3 1066.53688284286 1066.53578993586 93.869 2 0.11955410949775776 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000115159|P43304-2|GPD2', 'ENSG00000115159|ENST00000438166|GPD2'] 88607 10713 RALTVPEL True H1975_Epitope_Rep2 897.5283667644899 897.52726993586 46.232 2 0.11955308435751878 0.001733217785480968 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 35615 11685 GTLEQWIEK True NCI_RA007_Epitope_Rep5 1102.56587447202 1102.56476993586 51.599 2 0.1195465900053677 0.001733217785480968 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 94571 13107 RYIPTAAAF True PC9_epitope_Rep6 1008.5392658013599 1008.53816993586 62.032 2 0.1195451696797256 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 9012 16258 AVIDVGINRV True PC9_epitope_Rep5 1054.61349337078 1054.6123899358602 67.528 2 0.11954375131481744 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 123210 15101 VHLDSAVAL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 63.092 2 0.11954286814625327 0.001733217785480968 0.9438714419765777 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 43171 4494 IGSGC[Carbamidomethyl]NLDSAR True H1975_Epitope_Rep3 1148.5244209456298 1148.5233299358601 22.406 2 0.11954167772975664 0.001733217785480968 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 49434 21089 KILSELFTV True PC9_epitope_Rep5 1048.61684741572 1048.61574993586 86.181 2 0.11953985811552836 0.001733217785480968 0.9438714419765777 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF'] 131508 8333 VVVDPIQSVK True NCI_RA007_Epitope_Rep3 1082.63356010902 1082.6324699358602 39.893 2 0.11953946326500918 0.001733217785480968 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 95847 8813 SDKYGLGY True H1975_Epitope_Rep2 901.4181476091699 901.4175949679301 38.866 1 0.11953884746981541 0.001733217785480968 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 99991 22073 SLITDLQTI True PC9_epitope_Rep2 1002.5597264624199 1002.55862993586 90.377 2 0.11953247049240011 0.001733217785480968 0.9438714419765777 ['ENSG00000168014|ENST00000334126|C2CD3'] 25842 20908 FGFTLLEAL True NCI_RA007_Epitope_Rep3 1009.5484335027298 1009.54732993586 91.031 2 0.11952489576415347 0.001733217785480968 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 139899 5449 YVEGVHQQY True H1975_Epitope_Rep2 1121.51417325233 1121.5130699358601 25.986 2 0.11952425107644463 0.001733217785480968 0.9438714419765777 ['ENSG00000062716|ENST00000262291|VMP1', 'VMP1|p.Q104P|1|0.42|ENSG00000062716|chr17:59738844-59738844|A/C|missense_variant'] 113644 7827 TRDEDHIAL True PC9_epitope_Rep1 1068.51998690876 1068.5188899358602 34.933 2 0.1195224921918919 0.001733217785480968 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 130421 11159 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 49.559 2 0.11951954676219023 0.001733217785480968 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 86934 6086 QRSGNVAEL True PC9_epitope_Rep5 972.4988575413598 972.49776993586 28.399 2 0.11951616907665621 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 114860 13116 TTDLFGRDLSY True H1975_Epitope_Rep3 1286.6142812164198 1286.6131899358602 55.696 2 0.11951432353905332 0.001733217785480968 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 133225 8067 WEDFKQNTP True H1975_Epitope_Rep3 1163.5247379360299 1163.52364993586 36.003 2 0.11951197561965453 0.001733217785480968 0.9438714419765777 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 39807 12616 HQELFPHSL True PC9_epitope_Rep2 1106.55089311422 1106.5497899358602 53.838 2 0.11950663053871001 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 103835 14198 SRIDIANTL True PC9_epitope_Rep2 1001.5505587610501 1001.54946993586 59.88 2 0.11950533227268503 0.001733217785480968 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 1866 6211 AEIFHSADA True H1975_Epitope_Rep2 959.4348603024699 959.43376993586 28.86 2 0.11950515558195521 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 86244 9899 QPYM[Oxidation]PTVSA True PC9_epitope_Rep4 1008.4586329025999 1008.45752993586 45.727 2 0.1194971110901432 0.001733217785480968 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 21076 8911 ERDMSNVSL True PC9_epitope_Rep6 1049.48115887189 1049.48006993586 44.243 2 0.11949628641218442 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 108669 8538 TELISTTA True H1975_Epitope_Rep2 834.43346332014 834.4329149679301 37.796 1 0.11948823044544969 0.001733217785480968 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 67514 15313 LTELPPLDDY True H1975_Epitope_Rep1 1174.57577044938 1174.5746699358601 64.17 2 0.11948441733150977 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 1579 6148 AEFGQAESA True H1975_Epitope_Rep2 908.3875757568799 908.3870249679301 28.621 1 0.11948009773199114 0.001733217785480968 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 132172 8076 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 40.565 3 0.11947988276611861 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 99058 11701 SKVSILESL True NCI_RA007_Epitope_Rep3 974.56481184286 974.56370993586 53.14 2 0.11947862969894159 0.001733217785480968 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 26079 11230 FHEGDAYVV True PC9_epitope_Rep4 1035.4661604307498 1035.4650699358601 50.972 2 0.11947102329286108 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 18118 7492 EILSEVER True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 33.814 2 0.11946813153988513 0.001733217785480968 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 96699 3908 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 20.153 2 0.11945311665222037 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 99511 4455 SLESINSR True NCI_RA007_Epitope_Rep5 904.46140940348 904.46030993586 23.781 2 0.11945227723115932 0.001733217785480968 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 17112 15209 EGSPIKVTL True PC9_epitope_Rep3 942.53859709502 942.53750993586 63.647 2 0.1194472484002682 0.001733217785480968 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF'] 89114 12745 REFEMWAP True NCI_RA007_Epitope_Rep4 1064.4749512926398 1064.47384993586 56.082 2 0.11944706409819333 0.001733217785480968 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENSG00000116254|ENST00000262450|CHD5'] 6079 14598 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 61.152 2 0.11944239802604005 0.001733217785480968 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 124344 19854 VLDSEGYLLFY True H1975_Epitope_Rep1 1317.6492697428098 1317.64816993586 82.621 2 0.11944012369207357 0.001733217785480968 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 125975 10218 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.49088993586 44.184 2 0.11942911317853065 0.001761089882040206 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 28414 10685 FSDYLHPQY True H1975_Epitope_Rep2 1168.5189242796 1168.5178299358602 46.124 2 0.11942788324739595 0.001761089882040206 0.9438714419765777 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion'] 57449 9425 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 41.221 2 0.11942340227165153 0.001761089882040206 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 29789 8597 FVTFDDHD True NCI_RA007_Epitope_Rep3 994.40322582102 994.40212993586 40.891 2 0.11942330928759427 0.001761089882040206 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 129292 5079 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6567899358602 24.618 2 0.11942248648605433 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 108593 4930 TEIGSIHSA True NCI_RA007_Epitope_Rep3 913.45051036661 913.44940993586 26.385 2 0.11941992480945914 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 75642 21566 NQSELAVLL True PC9_epitope_Rep1 985.5444107514498 985.5438649679301 87.774 1 0.11941528921791102 0.001761089882040206 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 104410 3603 SSHVQQQAL True NCI_RA007_Epitope_Rep4 996.49885754136 996.49776993586 19.916 2 0.11941387794550118 0.001761089882040206 0.9438714419765777 ['ENSG00000136935|ENST00000373555|GOLGA1', 'ENST00000475407.5_2_9:127642811-127683993:-|nuORF'] 40012 6850 HQSSVGSVL True PC9_epitope_Rep4 912.46649478392 912.46538993586 33.568 2 0.11941307091396311 0.001761089882040206 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 21489 4400 ERQPGAASL True PC9_epitope_Rep6 927.4773938207899 927.47628993586 24.044 2 0.1194112336570757 0.001761089882040206 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 48714 5321 KEMQPTHPIRL True H1975_Epitope_Rep2 1348.7285402063599 1348.72690490379 25.52 3 0.11940564737931217 0.001761089882040206 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF'] 8836 16832 AVFPSIVGR True PC9_epitope_Rep3 944.5443511817999 944.54324993586 69.897 2 0.11939951524829465 0.001761089882040206 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 47682 20458 IYPSPTGVLI True PC9_epitope_Rep4 1058.60119735158 1058.60067496793 86.836 1 0.1193992102774077 0.001761089882040206 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion'] 40384 18718 HRTEMDWVL True PC9_epitope_Rep3 1185.5600778989299 1185.5589899358602 77.224 2 0.1193940974518271 0.001761089882040206 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 137461 21286 YLPDSLTQL True PC9_epitope_Rep1 1048.54407639828 1048.5429699358601 86.702 2 0.1193890094971137 0.001761089882040206 0.9438714419765777 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 97778 11402 SHHENLVSF True PC9_epitope_Rep3 1068.49885754136 1068.49776993586 48.86 2 0.11938327389565047 0.001761089882040206 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 21140 16652 ERDSGSFVAF True PC9_epitope_Rep5 1113.50908787189 1113.50798993586 69.057 2 0.11937523834461893 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 44694 17914 IPNPAQTSVVV True PC9_epitope_Rep3 1123.62372370131 1123.62262993586 74.108 2 0.11937456541645498 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 108500 11149 TEFLFHTA True NCI_RA007_Epitope_Rep4 964.46543215476 964.46432993586 49.758 2 0.11936445154796378 0.001761089882040206 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 23392 5124 EVVEEAENGR True PC9_epitope_Rep1 1130.5203808315798 1130.5192899358601 24.563 2 0.11936363989527717 0.001761089882040206 0.9438714419765777 ['ENST00000607242.1_1_13:82264202-82264532:+|nuORF', 'ENSG00000187514|ENST00000409115|PTMA', 'nc|ENSG00000187514|P06454|PTMA', 'ENST00000468027.5_1_2:232573416-232577283:+|nuORF', 'ENST00000466801.5_1_2:232571605-232577558:+|nuORF'] 53527 16636 KVPEWVDTV True PC9_epitope_Rep2 1071.5600608155898 1071.5589699358602 69.236 2 0.11935831868272363 0.001761089882040206 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 81563 5762 PRIASNAGSIA True NCI_RA007_Epitope_Rep4 1055.57235683479 1055.5712499358601 28.784 2 0.11935191670884567 0.001761089882040206 0.9438714419765777 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000584583.1_1_17:37006387-37006753:-|nuORF'] 78196 8003 PAPPPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 38.233 2 0.11935183927995985 0.001761089882040206 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 132519 19885 VYPEYVIQY True PC9_epitope_Rep4 1172.57537652656 1172.57426993586 84.62 2 0.11934906802360917 0.001761089882040206 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 132973 13078 VYVDLGGSHVF True NCI_RA007_Epitope_Rep4 1191.5924235730301 1191.5913299358601 57.405 2 0.11934541596587035 0.001761089882040206 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 16642 8435 EESPVQYAA True H1975_Epitope_Rep2 992.4450906329998 992.44398993586 37.396 2 0.11934522381210061 0.001761089882040206 0.9438714419765777 ['ENSG00000143653|ENST00000366510|SCCPDH'] 140179 4713 YVTTSTRTY True NCI_RA007_Epitope_Rep5 1090.5294889633 1090.52838993586 24.813 2 0.11933965540017477 0.001761089882040206 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 112988 14837 TPSPLPTV True PC9_epitope_Rep4 810.4487194614601 810.44762993586 65.01 2 0.11933692615996189 0.001761089882040206 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 26726 16028 FLDGNELTL True NCI_RA007_Epitope_Rep4 1020.51277627 1020.51166993586 69.52 2 0.11933343651647384 0.001761089882040206 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 6848 10498 AQIEGGVHGL True PC9_epitope_Rep3 979.50869394907 979.50758993586 45.32 2 0.11933247499931408 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 84018 5568 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47634993586 26.425 2 0.11931596847062165 0.001761089882040206 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 40978 5889 HYAHLIKTF True NCI_RA007_Epitope_Rep3 1128.6080140675201 1128.60637490379 30.141 3 0.11930875661996511 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1', 'ENST00000495574.1_1_10:129046289-129055694:+|nuORF', 'ENST00000484400.5_1_10:129046280-129142589:+|nuORF'] 3234 4765 AGFAGDDAPR True NCI_RA007_Epitope_Rep5 975.4410083120698 975.43990993586 25.013 2 0.11930728153333875 0.001761089882040206 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 17736 18685 EHSTVITFL True PC9_epitope_Rep4 1045.54441075145 1045.5433099358602 79.953 2 0.11930624965871983 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 6611 17444 APWPPKGLVPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 75.093 2 0.11928699735965198 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 32577 16219 GHAEVVNLL True PC9_epitope_Rep5 950.5185303567799 950.51742993586 67.378 2 0.1192822469157553 0.001761089882040206 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2'] 52175 8642 KMDDLNLHY True H1975_Epitope_Rep1 1147.53319444475 1147.53154490379 38.17 3 0.11928177482304207 0.001761089882040206 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF', 'SPRYD3|p.N13K|1|0.38|ENSG00000167778|chr12:53077246-53077246|G/T|missense_variant'] 2150 13967 AELYGPFTSA True H1975_Epitope_Rep2 1054.49712620586 1054.49657496793 58.872 1 0.11928082336334331 0.001761089882040206 0.9438714419765777 ['ENSG00000169217|ENST00000305596|CD2BP2'] 72057 12430 MRAQPSVVL True PC9_epitope_Rep5 999.5535359665099 999.55242993586 52.811 2 0.11925814037122226 0.001761089882040206 0.9438714419765777 ['PNPLA6|p.D881Tfs*24|1|0.35|ENSG00000032444|chr19:7554696-7554696|G/-|frameshift_variant', 'ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 83792 16212 QEELDTLFTTA True H1975_Epitope_Rep3 1266.5979624459399 1266.59686993586 67.815 2 0.11924910743351681 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A', 'nc|ENSG00000087995|Q96IZ6-2|METTL2A'] 1797 8622 AEIDAHLVA True H1975_Epitope_Rep1 937.48689587533 937.48578993586 38.091 2 0.11924668192237581 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 132972 12613 VYVDLGGSHVF True NCI_RA007_Epitope_Rep3 1191.5924235730301 1191.5913299358601 56.857 2 0.11921485910951526 0.001761089882040206 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 87615 6575 QTVAVGVIK True NCI_RA007_Epitope_Rep5 913.5596668927699 913.55856993586 31.952 2 0.11921346428889718 0.001761089882040206 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 31353 5023 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 24.401 2 0.11921147985765815 0.001761089882040206 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 21160 15948 ERDYTGYVL True PC9_epitope_Rep5 1114.5294889632999 1114.52838993586 66.333 2 0.11921018531386647 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000116138|Q9Y2G8-2|DNAJC16', 'ENSG00000116138|ENST00000375847|DNAJC16', 'ENST00000475133.5_1_1:15892828-15894669:+|nuORF'] 17115 13043 EGSPIKVTL True PC9_epitope_Rep6 942.53859709502 942.53750993586 61.765 2 0.1192001365200111 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000521260.1_1_5:170818338-170818467:+|nuORF'] 6723 20160 AQDEHLITFF True PC9_epitope_Rep4 1219.58733819259 1219.58624993586 85.682 2 0.1191976294560958 0.001761089882040206 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 103578 15170 SRDGMNIVL True PC9_epitope_Rep2 1003.5120650773499 1003.51096993586 63.608 2 0.11919668686211984 0.001761089882040206 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 37494 13523 GYFGNPQKF True PC9_epitope_Rep2 1056.50288029264 1056.5017899358602 57.306 2 0.11919207334102835 0.001761089882040206 0.9438714419765777 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 47729 7132 IYQKAFEHL True NCI_RA007_Epitope_Rep3 1147.6025943339098 1147.60093490379 35.174 3 0.11919195115042303 0.001761089882040206 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 109509 10807 THAAQQILL True PC9_epitope_Rep4 993.5607295219299 993.55962993586 49.327 2 0.11918935804302304 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 46350 7173 ITGPPEAQFK True H1975_Epitope_Rep1 1086.57095985246 1086.5698699358602 32.612 2 0.11918261017962674 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'chr3:185647138-185652094|367|11.01|0.58|4.25|-|0|IGF2BP2,IGF2BP2|1', 'chr17:49045065-49045890|343|22.99|0.56|5.35|+|0|IGF2BP1,IGF2BP1|1', 'nc|ENSG00000136231|O00425-2|IGF2BP3', 'PRKCA-IGF2BP3|1|fusion', 'ENSG00000136231|ENST00000258729|IGF2BP3', 'ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 104401 9922 SSHFLEQTL True NCI_RA007_Epitope_Rep5 1060.5189242796 1060.5178299358602 44.807 2 0.1191746378088762 0.001761089882040206 0.9438714419765777 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 57731 9093 LENLVNQAA True H1975_Epitope_Rep2 970.5083595959 970.50726993586 39.927 2 0.11916964833221838 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 43472 21985 IHVDFPVIL True PC9_epitope_Rep1 1051.60661708519 1051.6055299358602 89.387 2 0.11916557729315679 0.001761089882040206 0.9438714419765777 ['ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 88326 15102 QYLNKNALTTL True PC9_epitope_Rep4 1277.6979512707298 1277.6968499358602 66.019 2 0.11916234248601233 0.001761089882040206 0.9438714419765777 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant'] 41476 9536 IAYYDVDYEK True H1975_Epitope_Rep1 1277.58158410581 1277.5804899358602 41.603 2 0.11915792834805597 0.001761089882040206 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 26281 18561 FIDDANYSV True PC9_epitope_Rep3 1042.4607406971402 1042.46017496793 76.615 1 0.11915299258184056 0.001761089882040206 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 73862 18846 NHFPGSFQI True PC9_epitope_Rep3 1045.49812926537 1045.4970299358602 77.713 2 0.11914834886861837 0.001761089882040206 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 104682 7275 STAGLIIGK True NCI_RA007_Epitope_Rep5 858.51746772762 858.51636993586 34.66 2 0.11914016400909601 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA1|p.G190R|1|0.35|ENSG00000139910|chr14:26448915-26448915|C/T|missense_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 72494 15354 MVAPAVASV True PC9_epitope_Rep2 843.4524249429099 843.45132993586 64.342 2 0.11913958365519024 0.001761089882040206 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 104400 10170 SSHFLEQTL True NCI_RA007_Epitope_Rep4 1060.5189242796 1060.5178299358602 45.977 2 0.11912555590572392 0.001761089882040206 0.9438714419765777 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 76206 11303 NRWKQSVEL True PC9_epitope_Rep1 1158.61455599994 1158.6129149037902 48.356 3 0.11912533656347743 0.001761089882040206 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 117434 15498 VADPYVVIM True NCI_RA007_Epitope_Rep4 1005.5205045027299 1005.51940993586 67.307 2 0.11912497455090824 0.001761089882040206 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 25514 8237 FEQEMATAA True NCI_RA007_Epitope_Rep1 996.4222470134398 996.4216949679301 36.039 1 0.11912210377181051 0.001761089882040206 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 97739 12278 SHGEPTITSL True PC9_epitope_Rep1 1040.51383889916 1040.51274993586 52.083 2 0.11912185863858726 0.001761089882040206 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 7269 10036 ARPPGYEF True PC9_epitope_Rep2 935.45011644379 935.44900993586 43.928 2 0.1191151271738999 0.001761089882040206 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 84979 9295 QIDPTIQRV True PC9_epitope_Rep6 1068.5927579262 1068.5916699358602 45.915 2 0.11911139000054508 0.001761089882040206 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P50446', 'CON__Q922U2'] 23680 18040 EYGYIRTVL True PC9_epitope_Rep2 1112.5866099165999 1112.58550993586 74.696 2 0.11910890851376867 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000057294|Q99959|PKP2', 'ENSG00000057294|ENST00000340811|PKP2'] 132308 19088 VYLPLTSHI True PC9_epitope_Rep2 1041.58588164061 1041.58478993586 78.788 2 0.11910552389892053 0.001761089882040206 0.9438714419765777 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 84665 4686 QHEGGVQEL True PC9_epitope_Rep6 995.46722305991 995.46612993586 25.394 2 0.11910542427776995 0.001761089882040206 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 18047 12897 EIIRQLNGV True PC9_epitope_Rep2 1040.59784330664 1040.59674993586 54.906 2 0.1190887427741927 0.001761089882040206 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 61204 16183 LLDPASFEY True H1975_Epitope_Rep2 1053.50187723313 1053.50137496793 67.457 1 0.11908768918633045 0.001761089882040206 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 22314 15821 ETEEDKFLLLY True H1975_Epitope_Rep3 1398.6918628307799 1398.69127496793 66.304 1 0.11908558594807266 0.001761089882040206 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 38684 4360 HHSDGSVSL True PC9_epitope_Rep1 937.42535824793 937.42426993586 21.658 2 0.11907654420056696 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 1786 7288 AEIAESVQA True H1975_Epitope_Rep1 916.45017601344 916.44906993586 33.046 2 0.11906964879887998 0.001761089882040206 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 29471 21989 FVIDGFDEL True PC9_epitope_Rep4 1053.50187723313 1053.50137496793 92.801 1 0.11906375851852988 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 46911 15118 IVKDVLLVA True PC9_epitope_Rep6 968.6270181765999 968.62592993586 70.212 2 0.11906314072852238 0.001761089882040206 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 87371 12653 QTDIQGALSAY True H1975_Epitope_Rep3 1165.5615173675699 1165.56097496793 53.877 1 0.11905784873810102 0.001761089882040206 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 6661 17975 AQAGALLQV True PC9_epitope_Rep5 869.49706663621 869.49596993586 74.159 2 0.11905676542000097 0.001761089882040206 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 3258 4994 AGFAGDDAPR True PC9_epitope_Rep6 975.4410083120698 975.43990993586 26.815 2 0.11905445055649144 0.001761089882040206 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 77276 13257 NYISGIQTI True NCI_RA007_Epitope_Rep4 1007.52876068731 1007.52766993586 58.125 2 0.1190459640594133 0.001761089882040206 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 106482 16748 SVVGSNQLIEA True PC9_epitope_Rep5 1115.58225281215 1115.5811499358601 69.427 2 0.1190426887534378 0.001761089882040206 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 129677 12309 VTIKELDLY True H1975_Epitope_Rep2 1092.60667665484 1092.60556993586 52.43 2 0.1190402923050712 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000008441|Q14938-6|NFIX', 'nc|ENSG00000008441|Q14938-5|NFIX', 'nc|ENSG00000008441|Q14938-3|NFIX', 'NFIX-WDR26|1|fusion', 'nc|ENSG00000008441|Q14938-2|NFIX', 'nc|ENSG00000008441|Q14938-4|NFIX', 'ENSG00000008441|ENST00000592199|NFIX'] 126365 11937 VPLAIVNKA True PC9_epitope_Rep5 923.58040233735 923.57930993586 50.913 2 0.11903598248626021 0.001761089882040206 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 117144 12542 TYSPALNKM[Oxidation]F True PC9_epitope_Rep2 1186.5692459807399 1186.5681499358602 53.549 2 0.11903539458971774 0.001761089882040206 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 130892 14119 VVHDGFEGL True PC9_epitope_Rep5 971.47124581119 971.47014993586 59.319 2 0.11903169472312544 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 76347 9205 NSEPETLEY True H1975_Epitope_Rep1 1080.46113461996 1080.46057496793 40.314 1 0.11902047702935771 0.001761089882040206 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 105777 21684 SVIEQIVYV True PC9_epitope_Rep1 1048.580461907 1048.57936993586 88.235 2 0.11899484384179357 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 106161 8955 SVPEEFHTT True PC9_epitope_Rep1 1045.47163973401 1045.4705499358602 39.288 2 0.11899349271847752 0.001761089882040206 0.9438714419765777 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 112466 7740 TNQELQEINR True PC9_epitope_Rep5 1243.61567819875 1243.61458993586 34.713 2 0.11899225932679612 0.001761089882040206 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 35476 15421 GTFATLSELH True PC9_epitope_Rep4 1074.53457434374 1074.53346993586 67.248 2 0.1189901113360083 0.001761089882040206 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 115274 13234 TVDNARIVL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 55.77 2 0.1189851378618617 0.001761089882040206 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 7453 12277 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep1 1084.4746768895598 1084.47417496793 52.247 1 0.11897085598031135 0.0017932454421678344 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 33930 21255 GMPDFLEKL True PC9_epitope_Rep5 1048.52631815916 1048.5252299358601 86.808 2 0.11896902994594415 0.0017932454421678344 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7'] 96144 11122 SEEDPVTSIP True H1975_Epitope_Rep2 1072.49243474824 1072.4913299358602 47.816 2 0.11896893569705415 0.0017932454421678344 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 71843 19802 MPFGNVVSA True PC9_epitope_Rep3 920.4425885351999 920.44148993586 81.401 2 0.11896639466967991 0.0017932454421678344 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 100814 16148 SLRTLTNETF True PC9_epitope_Rep1 1180.60880191316 1180.6077099358602 66.927 2 0.11896478234418845 0.0017932454421678344 0.9438714419765777 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 89178 10461 REIDDYIVQA True H1975_Epitope_Rep3 1220.6037165327198 1220.60317496793 45.3 1 0.11896048337253168 0.0017932454421678344 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 24570 20598 FALPVLERL True PC9_epitope_Rep4 1056.6331661862 1056.63206993586 87.383 2 0.11895247917317793 0.0017932454421678344 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 38707 15450 HHSNILLTF True PC9_epitope_Rep4 1080.5716285588 1080.5705299358601 67.36 2 0.11894985911910294 0.0017932454421678344 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 109599 10948 THDEAINVL True PC9_epitope_Rep6 1010.5032742154599 1010.50216993586 52.99 2 0.11894874794952029 0.0017932454421678344 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 139129 15878 YSQELSLLY True H1975_Epitope_Rep2 1114.55464108198 1114.5540749679299 66.274 1 0.1189425045651582 0.0017932454421678344 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 71359 20012 MHYPTALLF True PC9_epitope_Rep4 1091.54738795691 1091.5462899358602 85.11 2 0.11893616742825575 0.0017932454421678344 0.9438714419765777 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 126318 12282 VPIYEGYALPH True H1975_Epitope_Rep3 1257.63937376545 1257.63826993586 52.421 2 0.11892949619636217 0.0017932454421678344 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 95108 10000 RYTTEFHEL True PC9_epitope_Rep2 1194.5669371011797 1194.56530490379 43.792 3 0.11892883682054345 0.0017932454421678344 0.9438714419765777 ['IPO7-WEE1|1|fusion', 'nc|ENSG00000166483|P30291-2|WEE1', 'ENST00000524549.1_1_11:9597437-9598815:+|nuORF', 'ENSG00000166483|ENST00000450114|WEE1'] 70902 14729 MEIVDAITTTA True H1975_Epitope_Rep2 1163.57439055039 1163.5732899358602 61.817 2 0.11892828849139209 0.0017932454421678344 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF'] 9102 8305 AVLEADFAK True NCI_RA007_Epitope_Rep3 962.5072969667399 962.50618993586 39.787 2 0.11892753045891713 0.0017932454421678344 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 136508 17180 YHLDSSGSYVF True PC9_epitope_Rep4 1273.5615173675699 1273.5604299358602 74.089 2 0.11892432233625279 0.0017932454421678344 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 73898 4858 NHHLQETSF True PC9_epitope_Rep6 1111.50467119779 1111.50356993586 26.209 2 0.11891233393843341 0.0017932454421678344 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 86824 14061 QRPPTIVL True PC9_epitope_Rep3 922.5600012459399 922.55890993586 59.175 2 0.11889914899794646 0.0017932454421678344 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 105156 5205 STMGYMAAK True NCI_RA007_Epitope_Rep5 958.4252242188999 958.42412993586 26.718 2 0.11888804363431435 0.0018007399404118783 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 61977 17199 LLLPGELAK True PC9_epitope_Rep3 952.5957180483199 952.59462993586 71.312 2 0.11888432316658053 0.0018007399404118783 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 97922 19280 SHNPLANIL True PC9_epitope_Rep5 977.52942939365 977.52832993586 79.205 2 0.11888416276113402 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 8480 3721 ATVAGVHVK True NCI_RA007_Epitope_Rep4 880.51305105352 880.51194993586 20.45 2 0.11888211246571391 0.0018007399404118783 0.9438714419765777 ['ENSG00000232838|ENST00000432901|PET117'] 103802 13560 SRGDFVVEY True PC9_epitope_Rep4 1070.50327421546 1070.5021699358601 60.054 2 0.11888088459261582 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 11589 11364 DGYDYDGYR True PC9_epitope_Rep1 1122.42541781758 1122.4243299358602 48.592 2 0.11886418939564901 0.0018007399404118783 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 28809 14731 FTDGDAALEF True H1975_Epitope_Rep1 1084.4713053808398 1084.47020993586 61.883 2 0.11886409953883476 0.0018007399404118783 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 40646 18596 HTIDTILTV True PC9_epitope_Rep3 1011.56006081559 1011.55896993586 76.753 2 0.11885766100411879 0.0018007399404118783 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 109652 6788 THDQAVQAL True PC9_epitope_Rep3 981.4879585044899 981.48686993586 31.13 2 0.11885678614680485 0.0018007399404118783 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 88335 20512 QYLQDAYSF True PC9_epitope_Rep3 1133.5029398622898 1133.5023749679299 84.161 1 0.1188468260739223 0.0018007399404118783 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000538600.1_1_12:6631091-6632090:+|nuORF'] 89666 5159 REVDPPM[Oxidation]GP True H1975_Epitope_Rep3 1012.4647809121999 1012.46368993586 24.949 2 0.11884173533091764 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 104457 5169 SSLNLRETN True NCI_RA007_Epitope_Rep4 1032.51998690876 1032.5188899358602 26.409 2 0.11884101549298487 0.0018007399404118783 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'VIM|p.D429Y|1|0.25|ENSG00000026025|chr10:17236305-17236305|G/T|missense_variant'] 64323 9974 LQNEPLPERL True NCI_RA007_Epitope_Rep2 1207.6560864587498 1207.6549899358602 43.424 2 0.11881483861901805 0.0018007399404118783 0.9438714419765777 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 31984 11871 GETEVGFVP True H1975_Epitope_Rep1 933.4443623570098 933.44381496793 50.66 1 0.11881211161282845 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant'] 30018 16551 FYHKYFNYL True PC9_epitope_Rep4 1293.61824439805 1293.6171499358602 71.638 2 0.11880562655300814 0.0018007399404118783 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 75861 14574 NRDNVGLVL True PC9_epitope_Rep1 998.5508931142199 998.54978993586 60.883 2 0.11879206256684405 0.0018007399404118783 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 72100 18285 MRDPIRILV True PC9_epitope_Rep5 1111.65358436095 1111.65248993586 75.348 2 0.11878477406228376 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 73164 9130 NEDLRSWTA True H1975_Epitope_Rep3 1090.50433684462 1090.5032299358602 40.108 2 0.11877852730333667 0.0018007399404118783 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 83882 12746 QEIATVVVP True NCI_RA007_Epitope_Rep4 954.5385970950199 954.5380449679301 56.086 1 0.11877377435719676 0.0018007399404118783 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 136446 15919 YHGGGVYII True PC9_epitope_Rep5 977.4970666362099 977.49596993586 66.224 2 0.11877223345800692 0.0018007399404118783 0.9438714419765777 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000484626.1_1_6:7404210-7405259:+|nuORF'] 119135 6220 VEILANDQGNR True PC9_epitope_Rep6 1227.6207635791898 1227.6196699358602 32.394 2 0.11877221203842163 0.0018007399404118783 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 108819 9695 TEQPPSPLP True H1975_Epitope_Rep3 964.48656152216 964.48601496793 42.313 1 0.11877172018456907 0.0018007399404118783 0.9438714419765777 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 73740 7417 NHANGLTL True PC9_epitope_Rep2 838.4297153523801 838.42860993586 33.906 2 0.11877159184489412 0.0018007399404118783 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 123069 16799 VHAEEVIVL True PC9_epitope_Rep5 1007.5651461960299 1007.56404993586 69.626 2 0.11877081706671776 0.0018007399404118783 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'KDM3B|p.A1619Rfs*25|1|0.09|ENSG00000120733|chr5:138429926-138429927|-/C|frameshift_variant'] 116194 13129 TVTNAVVTV True PC9_epitope_Rep4 902.50729696674 902.50618993586 58.395 2 0.11876686521709343 0.0018007399404118783 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 77391 18884 NYLSIFRKF True PC9_epitope_Rep4 1186.6498788795 1186.6482449037899 80.723 3 0.11876044093979947 0.0018007399404118783 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 119096 11014 VEIAYSDVA True H1975_Epitope_Rep3 965.4705771048499 965.46948993586 47.455 2 0.11875993716618523 0.0018007399404118783 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 70355 22396 LYPSIIQEF True PC9_epitope_Rep3 1108.580461907 1108.57987496793 91.426 1 0.11875394840425699 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 88236 20532 QYEEQFVTL True PC9_epitope_Rep2 1155.5448046742697 1155.54427496793 84.409 1 0.11875224159300689 0.0018007399404118783 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 28093 19712 FREDMPSIL True PC9_epitope_Rep3 1106.5430308524599 1106.54192993586 81.051 2 0.11875164558377574 0.0018007399404118783 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 27363 21464 FMPPGLQEL True PC9_epitope_Rep2 1030.5157534754599 1030.51464993586 88.034 2 0.11873873984439474 0.0018007399404118783 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 104309 16552 SSELFTLTY True H1975_Epitope_Rep3 1059.51244191683 1059.5113499358602 69.164 2 0.11873411310276018 0.0018007399404118783 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 8915 13989 AVGKIFSNV True PC9_epitope_Rep1 933.52836676449 933.52726993586 58.647 2 0.11873117335302637 0.0018007399404118783 0.9438714419765777 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 17522 11262 EHINEGETAML True PC9_epitope_Rep4 1242.55505208814 1242.5539499358601 51.094 2 0.11872755903218492 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 23642 17675 EYGIFNQKI True PC9_epitope_Rep2 1110.57095985246 1110.5698699358602 73.266 2 0.11872403354331248 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 52147 17893 KLVGEFLEV True PC9_epitope_Rep6 1032.5855472874398 1032.5844499358602 81.45 2 0.11872310655295393 0.0018007399404118783 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1'] 78663 18501 PEALFQPSFL True H1975_Epitope_Rep3 1147.59136094387 1147.59026993586 77.59 2 0.11872289553197828 0.0018007399404118783 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 136710 22370 YIITEIPSL True PC9_epitope_Rep1 1047.58521293427 1047.5841099358602 90.864 2 0.11871565888368388 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000155085|Q5TCS8-2|AK9', 'nc|ENSG00000155085|Q5TCS8-1|AK9', 'nc|ENSG00000155085|Q5TCS8-3|AK9', 'nc|ENSG00000155085|Q5TCS8-6|AK9', 'ENSG00000155085|ENST00000424296|AK9'] 47334 20459 IYGYVAEQF True PC9_epitope_Rep3 1088.5178616504397 1088.51727496793 83.951 1 0.11871311288203837 0.0018007399404118783 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 138769 14614 YSDDIPHAL True PC9_epitope_Rep1 1029.47672511445 1029.47562993586 61.036 2 0.11869597259590282 0.0018007399404118783 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 39684 8662 HPTENLIASA True PC9_epitope_Rep2 1051.52982331647 1051.5287299358602 38.684 2 0.11869427630784989 0.0018007399404118783 0.9438714419765777 ['ENSG00000196981|ENST00000330689|WDR5B'] 21215 19298 ERFNVPVSL True PC9_epitope_Rep1 1059.5712942056298 1059.57077496793 79.034 1 0.11868425691782276 0.0018007399404118783 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 42731 16892 IFDLGGGTFD True H1975_Epitope_Rep1 1040.48147614172 1040.48097496793 70.385 1 0.11868248627895511 0.0018007399404118783 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 48579 7197 KEIDVDAVA True H1975_Epitope_Rep3 958.4971262058599 958.49602993586 32.658 2 0.11867767032766435 0.0018007399404118783 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 40521 12034 HSIPVTVEV True PC9_epitope_Rep6 979.53384606775 979.53274993586 57.583 2 0.11867745439769657 0.0018007399404118783 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5', 'HDAC5|p.L646Sfs*24|1|0.2|ENSG00000108840|chr17:44086686-44086686|G/-|frameshift_variant'] 19962 14875 EMDSPILGDY True H1975_Epitope_Rep2 1138.4852411928198 1138.4841499358602 62.369 2 0.11867549286205242 0.0018007399404118783 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 70752 13749 MECPGVFAA True H1975_Epitope_Rep2 923.3881104341898 923.3875649679301 58.031 1 0.1186725849399006 0.0018007399404118783 0.9438714419765777 ['ENST00000343411.7_1_16:84150358-84150463:-|nuORF'] 83724 6591 QEARPPLVSA True H1975_Epitope_Rep3 1066.5771078620598 1066.5760099358602 30.306 2 0.11865649994244867 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 5072 19712 ALLPELREV True PC9_epitope_Rep5 1038.6073453611798 1038.6062499358602 80.867 2 0.1186561100636061 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000170175|P11230-2|CHRNB1', 'ENSG00000170175|ENST00000306071|CHRNB1'] 38016 9264 HEIESLYTKL True NCI_RA007_Epitope_Rep5 1231.6448530687098 1231.6437499358601 42.282 2 0.1186445144829388 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 5210 16305 ALPSKLPTF True PC9_epitope_Rep6 972.56441792004 972.56332993586 75.079 2 0.11864081043103286 0.0018007399404118783 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 105701 14208 SVHGDFLNV True PC9_epitope_Rep4 986.48214484806 986.48104993586 62.56 2 0.11863954026108318 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 46922 21493 IVLDRLIEL True PC9_epitope_Rep3 1082.66994561774 1082.6688499358602 87.965 2 0.1186306106335209 0.0018007399404118783 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 76353 9537 NSEPETLEY True H1975_Epitope_Rep2 1080.46113461996 1080.46057496793 41.656 1 0.1186289252147258 0.0018007399404118783 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 83753 7120 QEDSFSAEA True H1975_Epitope_Rep2 982.3879696797 982.3874249679301 32.319 1 0.11862339710423453 0.0018007399404118783 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 44954 9535 IQGALSAY True H1975_Epitope_Rep3 821.42831837005 821.4277649679301 41.684 1 0.11862302476737707 0.0018007399404118783 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 40845 10555 HVLEEVQQV True PC9_epitope_Rep4 1079.56112344475 1079.56002993586 48.33 2 0.11862300375968748 0.0018007399404118783 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 69091 16340 LVKDVFISA True PC9_epitope_Rep5 990.57498260374 990.57388993586 67.849 2 0.11862249005523166 0.0018007399404118783 0.9438714419765777 ['ENSG00000008018|ENST00000262193|PSMB1'] 46683 13580 ITVTSEVPFSK True PC9_epitope_Rep6 1206.6496040959798 1206.6485099358601 63.975 2 0.11861384477963986 0.0018007399404118783 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22'] 62160 14250 LLPGKTYSF True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 62.717 2 0.11860411374931137 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 101878 9225 SPLFSQHTA True PC9_epitope_Rep5 986.48214484806 986.48104993586 40.431 2 0.11860399401875199 0.0018007399404118783 0.9438714419765777 ['ENSG00000167721|ENST00000301364|TSR1'] 28365 8363 FSDIVKQGY True H1975_Epitope_Rep2 1055.52876068731 1055.52766993586 37.12 2 0.11860177529736403 0.0018007399404118783 0.9438714419765777 ['ENSG00000125170|ENST00000340099|DOK4', 'ENST00000561918.1_1_16:57512562-57513515:-|nuORF'] 39480 19874 HPAAFPLPVV True PC9_epitope_Rep2 1046.59130137422 1046.59020993586 81.839 2 0.11859679520472241 0.0018007399404118783 0.9438714419765777 ['ENSG00000108523|ENST00000262482|RNF167'] 21265 8111 ERIMKAQAL True PC9_epitope_Rep1 1058.5906497512199 1058.58954993586 36.025 2 0.11859493872317192 0.0018007399404118783 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 75876 12517 NRDNVGLVL True PC9_epitope_Rep6 998.5508931142199 998.54978993586 59.577 2 0.11859487629919414 0.0018007399404118783 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 74726 24631 NLLDLLTEV True PC9_epitope_Rep5 1028.57537652656 1028.5748749679299 99.87 1 0.11858642837590055 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 97604 16946 SHADVVNLL True PC9_epitope_Rep5 966.51344497634 966.51234993586 70.201 2 0.11858601577571762 0.0018007399404118783 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 132277 20154 VYLDKFIRL True PC9_epitope_Rep1 1165.68593003505 1165.68427490379 82.351 3 0.11857702590797532 0.0018007399404118783 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 7914 12938 ATDDITELY True H1975_Epitope_Rep1 1039.47097102767 1039.46986993586 54.843 2 0.1185717008169719 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 47433 14193 IYIKQIKTF True PC9_epitope_Rep3 1152.6906810623198 1152.6890249037901 59.678 3 0.1185675836599553 0.0018007399404118783 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 95168 17813 SAAFPGASL True PC9_epitope_Rep2 819.41266830591 819.41156993586 73.81 2 0.11856671122833917 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 61973 17120 LLLPGELAK True PC9_epitope_Rep1 952.5957180483199 952.59462993586 70.676 2 0.11856630208738929 0.0018007399404118783 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 2250 11892 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.51128993586 50.892 2 0.11856574828176546 0.0018007399404118783 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 39989 4582 HQRITEEL True NCI_RA007_Epitope_Rep5 1024.53015766964 1024.5290699358602 24.286 2 0.11856243230869881 0.0018007399404118783 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 118630 4332 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 21.777 2 0.11854859104610932 0.0018007399404118783 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 7192 15732 ARDETEFYL True PC9_epitope_Rep4 1142.5244035828598 1142.5233099358602 68.438 2 0.11854513581575148 0.0018007399404118783 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 36459 13771 GVISFAVWK True NCI_RA007_Epitope_Rep3 1005.5647522732099 1005.56364993586 61.496 2 0.11853880430811717 0.0018007399404118783 0.9438714419765777 ['ENSG00000215712|ENST00000400788|TMEM242'] 83648 7923 QEAEPPLTA True H1975_Epitope_Rep2 954.4658260775799 954.46472993586 35.421 2 0.11853492239835121 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 11973 19954 DHTVGFIL True PC9_epitope_Rep2 900.4705175351999 900.4699649679301 82.152 1 0.11852860586949213 0.0018007399404118783 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 2525 10374 AEQTLSQLP True H1975_Epitope_Rep3 985.5080252427299 985.50692993586 44.959 2 0.11852377283752608 0.0018007399404118783 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 106053 13975 SVLSDLHEA True PC9_epitope_Rep1 969.4767251144501 969.47562993586 58.593 2 0.11852337210877095 0.0018007399404118783 0.9438714419765777 ['ENSG00000173402|ENST00000308775|DAG1'] 8935 8913 AVGLVLPAK True NCI_RA007_Epitope_Rep5 866.5589386167799 866.55784993586 40.946 2 0.11852091570638927 0.0018007399404118783 0.9438714419765777 ['ENSG00000162496|ENST00000616661|DHRS3', 'nc|ENSG00000162496|O75911-2|DHRS3'] 4406 10062 AIVAYGLYK True NCI_RA007_Epitope_Rep4 996.56441792004 996.56332993586 45.549 2 0.11852016745477488 0.0018007399404118783 0.9438714419765777 ['ENST00000470543.1_1_3:42826765-42845976:-|nuORF', 'ENSG00000181061|ENST00000321331|HIGD1A', 'nc|ENSG00000181061|Q9Y241-2|HIGD1A'] 87478 7453 QTETHNVFY True H1975_Epitope_Rep3 1137.50908787189 1137.50798993586 33.646 2 0.11851190293606105 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000131724|P78552-2|IL13RA1', 'ENSG00000131724|ENST00000371666|IL13RA1'] 84890 21089 QHSIPVFIF True PC9_epitope_Rep2 1086.58621599378 1086.5851099358601 86.576 2 0.11850793201800644 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496255-118496735:-|nuORF'] 74825 20262 NLPIFLPRV True PC9_epitope_Rep4 1067.64915060351 1067.6480499358602 86.081 2 0.11849708224454623 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 74025 9718 NHSDYNM[Oxidation]VL True PC9_epitope_Rep1 1107.46550918819 1107.4644099358602 42.239 2 0.1184895664971289 0.0018007399404118783 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 130471 17404 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 71.944 2 0.11848882662441955 0.0018007399404118783 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 17585 18760 EHLQLISL True PC9_epitope_Rep4 951.5389314481899 951.53782993586 80.243 2 0.11848801352107796 0.0018007399404118783 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 86493 20140 QQYNSFVSL True PC9_epitope_Rep2 1084.5189242796 1084.5178299358602 82.88 2 0.1184877852058237 0.0018007399404118783 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 47426 13996 IYIKQIKTF True PC9_epitope_Rep1 1152.6906810623198 1152.6890249037901 58.673 3 0.11848457704777718 0.0018007399404118783 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 48491 7413 KEFENPEVP True NCI_RA007_Epitope_Rep3 1087.51858992643 1087.51748993586 36.283 2 0.11848087024009579 0.0018007399404118783 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'RAD21-EIF3H|4|fusion'] 91832 14045 RPNDIMAEV True PC9_epitope_Rep3 1043.50697969691 1043.50588993586 59.114 2 0.11848003514361388 0.0018007399404118783 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 103017 20857 SQIYPVVCV True PC9_epitope_Rep3 1006.5157534754599 1006.51464993586 85.499 2 0.11847621768606444 0.0018007399404118783 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 37221 20210 GVVDIFQTV True PC9_epitope_Rep6 976.52294703088 976.52239496793 90.413 1 0.11847529645839679 0.0018007399404118783 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 45061 11394 IQQGETPGL True PC9_epitope_Rep1 941.4818104948898 941.48070993586 48.707 2 0.11847079941298859 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143', 'ENST00000532305.1_1_11:9546777-9549157:+|nuORF'] 114061 9992 TRNPVSEEL True PC9_epitope_Rep5 1043.52473793603 1043.52364993586 43.409 2 0.11846109668508366 0.0018007399404118783 0.9438714419765777 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.C424Afs*36|1|0.25|ENSG00000168411|chr16:74636502-74636502|A/-|frameshift_variant'] 13736 10197 DQLADLYK True NCI_RA007_Epitope_Rep1 964.4865615221601 964.48546993586 43.676 2 0.11844848201194717 0.0018007399404118783 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 17679 18284 EHSIATLLL True PC9_epitope_Rep6 995.56514619603 995.56404993586 82.973 2 0.11844269720913571 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 102474 7816 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 35.433 2 0.11843208676115309 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 59111 10233 LGEHNIDVLEG True H1975_Epitope_Rep2 1194.5880664685799 1194.58696993586 44.366 2 0.11843026332204765 0.0018007399404118783 0.9438714419765777 ['CON__P00761'] 139066 21133 YSLEKVFGI True PC9_epitope_Rep1 1054.5698972233 1054.5688099358601 86.118 2 0.11842547808835407 0.0018007399404118783 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 8143 11408 ATFFGEVVK True NCI_RA007_Epitope_Rep4 996.5280324113198 996.52692993586 50.796 2 0.11842362532562604 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000183527|O95456-2|PSMG1', 'ENSG00000183527|ENST00000331573|PSMG1'] 40020 4170 HQVEQTEL True NCI_RA007_Epitope_Rep3 982.4719740871799 982.47086993586 23.019 2 0.11842324868015193 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 7183 16428 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.5233099358602 68.433 2 0.11842307911017452 0.0018007399404118783 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 114001 19699 TRLPTPVLL True PC9_epitope_Rep1 1008.6331661861999 1008.63206993586 80.598 2 0.11842231690150849 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 6870 12463 AQIGSYVHV True PC9_epitope_Rep4 972.50288029264 972.50178993586 55.746 2 0.11841609792815848 0.0018007399404118783 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 111337 23113 TLIEDILGV True PC9_epitope_Rep4 971.5539128059899 971.55280993586 97.124 2 0.11841125548714533 0.0018007399404118783 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 140820 9960 YYSPTKNEI True PC9_epitope_Rep5 1113.53423999057 1113.5331499358601 43.286 2 0.11840469306943066 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 35669 5578 GTM[Oxidation]TGMLYK True NCI_RA007_Epitope_Rep5 1016.46708941132 1016.46598993586 28.143 2 0.11840322779427494 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 136366 9705 YHDHTKIII True PC9_epitope_Rep5 1138.61349337078 1138.6118549037901 42.298 3 0.11840278289068526 0.0018007399404118783 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 116057 6870 TVRSSTSSI True PC9_epitope_Rep3 936.48762415132 936.48652993586 31.44 2 0.11840038356618307 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 96539 12155 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42816496793 51.839 1 0.11839830610032749 0.0018007399404118783 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 70434 17381 LYRLKFNEF True PC9_epitope_Rep2 1228.6604435632 1228.65880490379 72.116 3 0.11839172340692322 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 115823 13565 TVMDSKIVQV True PC9_epitope_Rep4 1118.60054572858 1118.59944993586 60.072 2 0.1183858940304949 0.0018007399404118783 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 64566 13177 LRDPGSVIV True PC9_epitope_Rep3 954.5498304850599 954.54872993586 55.718 2 0.11837461871374176 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'KDM5C|p.Q1138P|2|0.17|ENSG00000126012|chrX:53194956-53194956|T/G|missense_variant', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 94065 3774 RVSVVAEPK True NCI_RA007_Epitope_Rep4 983.5763795860698 983.57528993586 20.686 2 0.118371737257898 0.0018007399404118783 0.9438714419765777 ['ENST00000560403.5_1_14:24610645-24610756:-|nuORF', 'ENST00000216799.8_1_14:24610479-24610756:-|nuORF'] 138315 18068 YRAPELML True PC9_epitope_Rep5 991.5160878286299 991.51498993586 74.513 2 0.11836989854586892 0.0018007399404118783 0.9438714419765777 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 71826 21717 MPALGWAVA True PC9_epitope_Rep1 914.4684093602199 914.46786496793 88.367 1 0.11833686378767265 0.0018007399404118783 0.9438714419765777 ['AOC1|p.L708Wfs*7|1|0.34|ENSG00000002726|chr7:150861073-150861073|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 90311 15924 RIADQFLGA True PC9_epitope_Rep3 989.5294293936499 989.52832993586 66.399 2 0.1183340530137966 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 130407 10779 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 49.443 2 0.11833280042217491 0.0018007399404118783 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 2141 11513 AELWGEQAEA True H1975_Epitope_Rep2 1102.49310345458 1102.49200993586 49.342 2 0.11833041689848789 0.0018007399404118783 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 75522 10595 NQKSVLVSV True PC9_epitope_Rep5 972.5603951687599 972.55928993586 45.742 2 0.11832126144536051 0.0018007399404118783 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 136588 14894 YHVNFSQAI True PC9_epitope_Rep4 1077.52434401321 1077.5232499358601 65.23 2 0.11831981476682542 0.0018007399404118783 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'NFE2L3|p.L356Ffs*6|1|0.39|ENSG00000050344|chr7:26184762-26184762|C/-|frameshift_variant', 'NFE2L3|p.A398Qfs*3|1|0.16|ENSG00000050344|chr7:26184890-26184900|GCCACAGAAGA/-|frameshift_variant'] 25479 5292 FENVGSPKP True H1975_Epitope_Rep2 973.4868958753299 973.48578993586 25.411 2 0.11831913202321769 0.0018007399404118783 0.9438714419765777 ['ENSG00000165895|ENST00000298815|ARHGAP42'] 31472 10215 GEELAGAIAA True H1975_Epitope_Rep1 900.4552613938798 900.45471496793 44.233 1 0.11831533652073568 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 66594 7340 LSSPATLNSR True PC9_epitope_Rep3 1044.5563724174801 1044.55526993586 33.243 2 0.11831461615501979 0.0018007399404118783 0.9438714419765777 ['CON__P00761'] 26793 11929 FLDTNETPY True H1975_Epitope_Rep2 1098.48695544498 1098.4858499358602 50.963 2 0.11831072088114257 0.0018007399404118783 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 132932 13353 VYTVVDEM[Oxidation]F True NCI_RA007_Epitope_Rep4 1117.50016336141 1117.49957496793 58.515 1 0.11830311035036332 0.0018007399404118783 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 12571 17955 DLDLSPLEY True H1975_Epitope_Rep2 1063.50735653639 1063.50677496793 74.386 1 0.11829939171717525 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 138327 17113 YRAPEVLL True PC9_epitope_Rep3 959.5440168286299 959.54290993586 70.979 2 0.1182950208407303 0.0018007399404118783 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 71071 5301 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 25.469 1 0.11829334318330922 0.0018007399404118783 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 94823 13429 RYLTVATVF True NCI_RA007_Epitope_Rep1 1068.59678067748 1068.59568993586 56.24 2 0.1182890582615043 0.0018007399404118783 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 57172 5169 LEERYVPRA True H1975_Epitope_Rep2 1131.6036569630699 1131.6020249037902 24.958 3 0.1182845794349704 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 138330 15318 YRAPEVLL True PC9_epitope_Rep4 959.5440168286299 959.54290993586 66.853 2 0.11828377244929877 0.0018007399404118783 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 94561 15725 RYIPTAAAF True PC9_epitope_Rep1 1008.5392658013599 1008.53816993586 65.309 2 0.11828264722308852 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 119941 9727 VEYEVPEAA True H1975_Epitope_Rep1 1005.4654917244097 1005.4649749679301 42.342 1 0.11827654720647622 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 87522 11985 QTHSVFVNV True PC9_epitope_Rep2 1029.5243440132099 1029.5232499358601 51.419 2 0.11827466306584955 0.0018007399404118783 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 27967 19916 FQSSAVMAL True PC9_epitope_Rep1 952.4688032830398 952.46770993586 81.425 2 0.11827229289602133 0.0018007399404118783 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 22205 6423 ETDEQRLRDEY True H1975_Epitope_Rep3 1452.6481005258397 1452.64700993586 29.684 2 0.11827082408017404 0.0018007399404118783 0.9438714419765777 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2'] 38586 10333 HHGTSILTL True PC9_epitope_Rep4 977.52942939365 977.52832993586 47.438 2 0.11826904154181703 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-5|PARPBP'] 8971 11814 AVHDSFVAV True PC9_epitope_Rep2 943.4763311916299 943.4752299358599 50.773 2 0.11826854973488266 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 27748 9285 FQDRPVSSL True PC9_epitope_Rep6 1047.53490869691 1047.53380993586 45.876 2 0.1182646716105079 0.0018007399404118783 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 57138 6020 LEEQKIVQA True H1975_Epitope_Rep2 1056.5815245361598 1056.5804299358601 28.134 2 0.11826139035368782 0.0018007399404118783 0.9438714419765777 ['ENSG00000167842|ENST00000611091|MIS12'] 117119 19751 TYSIGFLRF True PC9_epitope_Rep6 1102.5811306133398 1102.58002993586 88.632 2 0.11825335075532847 0.0018007399404118783 0.9438714419765777 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF', 'ENST00000468535.5_1_7:1589488-1590526:-|nuORF', 'ENST00000474813.5_1_7:1589488-1595099:-|nuORF', 'ENSG00000164855|ENST00000297477|TMEM184A'] 73797 10650 NHDTALTL True PC9_epitope_Rep3 883.43994568291 883.43884993586 45.912 2 0.11825033671884368 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 28879 17345 FTDVNKIYL True PC9_epitope_Rep2 1111.5913609438699 1111.59026993586 71.971 2 0.11824563062074411 0.0018007399404118783 0.9438714419765777 ['ENSG00000101337|ENST00000398022|TM9SF4', 'TM9SF4-HM13|8|fusion', 'TM9SF4-HM13|7|fusion', 'TM9SF4-HM13|2|fusion', 'TM9SF4-HM13|9|fusion', 'TM9SF4-HM13|1|fusion', 'TM9SF4-HM13|3|fusion'] 86704 8362 QRIDSDDAL True PC9_epitope_Rep3 1031.4883524273098 1031.48724993586 37.133 2 0.11824429400367702 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 91787 12334 RPLEVAIEA True PC9_epitope_Rep4 996.5603951687599 996.55928993586 55.252 2 0.11821271739245952 0.0018007399404118783 0.9438714419765777 ['ENSG00000178921|ENST00000314666|PFAS', 'PFAS|p.N387S|1|0.54|ENSG00000178921|chr17:8257891-8257891|A/G|missense_variant'] 86558 7038 QRAQMTAAL True PC9_epitope_Rep4 988.5123994305198 988.51130993586 34.324 2 0.11821234750447471 0.0018007399404118783 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 69484 7744 LVSESSDVLPK True NCI_RA007_Epitope_Rep5 1172.6288686514001 1172.6277699358602 36.485 2 0.11821168163610048 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 28389 11679 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44417496793 49.912 1 0.11820898913569697 0.0018007399404118783 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 39849 9526 HQGPATTVAF True PC9_epitope_Rep4 1027.50869394907 1027.50758993586 44.252 2 0.11819924986607823 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 46269 5676 ITDVKPGNY True H1975_Epitope_Rep3 1005.51311062317 1005.51200993586 26.861 2 0.11819363176706466 0.0018007399404118783 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX', 'ENST00000513319.5_1_5:121402440-121412860:-|nuORF', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3', 'ENSG00000115318|ENST00000264094|LOXL3'] 70888 10757 M[Oxidation]EHPYFYTV True H1975_Epitope_Rep3 1201.5113967514499 1201.51028993586 46.456 2 0.11819157874361635 0.0018007399404118783 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 34906 8154 GQVTEAVKV True PC9_epitope_Rep5 929.5181960036099 929.51708993586 36.303 2 0.11819090192221465 0.0018007399404118783 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 59884 6021 LHHDDPEVL True PC9_epitope_Rep4 1073.51417325233 1073.5130699358601 30.14 2 0.11818628590931866 0.0018007399404118783 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 57101 8660 LEEMEAPAA True H1975_Epitope_Rep2 959.4269980407098 959.42590993586 38.269 2 0.11818381830662163 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 64543 8088 LRDENVNVV True PC9_epitope_Rep4 1056.5563724174801 1056.55526993586 38.561 2 0.11817959316794793 0.0018007399404118783 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 17249 20047 EHAPSIIFM True PC9_epitope_Rep3 1043.5110024481899 1043.5099099358602 82.36 2 0.11817778725607676 0.0018007399404118783 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 9468 5918 AVYADSGNFK True NCI_RA007_Epitope_Rep4 1070.50327421546 1070.5021699358601 29.385 2 0.11817721550781896 0.0018007399404118783 0.9438714419765777 ['ENSG00000145780|ENST00000274457|FEM1C', 'FEM1C|p.R356Q|1|0.18|ENSG00000145780|chr5:115525095-115525095|C/T|missense_variant'] 86642 7368 QRFADTHSL True PC9_epitope_Rep1 1073.52540664237 1073.5243099358602 33.154 2 0.11817683916755652 0.0018007399404118783 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 108785 10972 TEQDPYNNIV True H1975_Epitope_Rep2 1191.5407819229902 1191.53968993586 47.234 2 0.118174560671584 0.0018007399404118783 0.9438714419765777 ['ENSG00000146085|ENST00000274813|MMUT'] 129262 10208 VTDPSTLEQY True H1975_Epitope_Rep3 1151.53463391339 1151.5340749679299 44.31 1 0.11817401506552082 0.0018007399404118783 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 76385 17255 NSLDAKEIYL True PC9_epitope_Rep5 1164.60265390356 1164.60154993586 71.383 2 0.11817125741775467 0.0018007399404118783 0.9438714419765777 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10'] 47827 19005 IYSIDFTRF True PC9_epitope_Rep6 1160.5866099165999 1160.58550993586 85.746 2 0.11816426632624667 0.0018007399404118783 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B'] 96028 10046 SEALPSDIAA True H1975_Epitope_Rep1 972.47639076128 972.47584496793 43.581 1 0.11816386070385054 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 92175 15379 RQFDVDILI True NCI_RA007_Epitope_Rep5 1117.6131590176099 1117.61206993586 65.86 2 0.11816383642169938 0.0018007399404118783 0.9438714419765777 ['ENST00000548259.1_1_12:110930799-110939856:-|nuORF', 'ENSG00000111237|ENST00000549578|VPS29', 'nc|ENSG00000111237|Q9UBQ0-2|VPS29'] 63643 18137 LPNLQTVTV True PC9_epitope_Rep6 983.56514619603 983.56404993586 82.401 2 0.11816154918124287 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 86504 10418 QRAHQILVL True PC9_epitope_Rep2 1076.6454622054 1076.6443699358601 45.394 2 0.11815118803764635 0.0018007399404118783 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2'] 4430 17964 AIVKEIVNI True PC9_epitope_Rep1 997.6171817688898 997.61608993586 73.892 2 0.11814514615764765 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 113357 5602 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.54912993586 28.236 2 0.11814464784264415 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 2242 12119 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 51.699 2 0.11814028976002842 0.0018007399404118783 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 84907 8001 QHSTAQLNL True PC9_epitope_Rep2 1010.5145076055 1010.51340993586 36.137 2 0.11813965664748656 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 124431 3783 VLENAEGAR True NCI_RA007_Epitope_Rep2 957.4879585044898 957.48686993586 19.354 2 0.11813873268790866 0.0018007399404118783 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000506477.5_1_5:137906647-137911007:-|nuORF'] 8442 8019 ATSKVALVY True H1975_Epitope_Rep2 950.54368247546 950.54258993586 35.793 2 0.11813177304667682 0.0018007399404118783 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 65185 15335 LSDVFPGVQY True H1975_Epitope_Rep3 1123.5549754351498 1123.55447496793 64.397 1 0.11812546442827243 0.0018007399404118783 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 77279 19999 NYISGIQTI True PC9_epitope_Rep1 1007.52876068731 1007.52766993586 81.753 2 0.11812319203490954 0.0018007399404118783 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 113699 11446 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 48.906 2 0.11812116995047739 0.0018007399404118783 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 138328 14840 YRAPEVLL True PC9_epitope_Rep4 959.5440168286299 959.54290993586 65.02 2 0.11811515712918481 0.0018007399404118783 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 106669 18173 SYAELGTTI True PC9_epitope_Rep2 953.47057710485 953.46948993586 75.205 2 0.11811206596572565 0.0018007399404118783 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 124388 7020 VLEDSDLK True PC9_epitope_Rep3 917.4705771048499 917.46948993586 32.014 2 0.11811012863352639 0.0018007399404118783 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 76855 22437 NVIDYIDTI True PC9_epitope_Rep3 1064.53899101784 1064.5378899358602 91.579 2 0.11810477208331206 0.0018007399404118783 0.9438714419765777 ['ENSG00000156017|ENST00000376834|CARNMT1'] 25864 5053 FGGPGTASRP True NCI_RA007_Epitope_Rep2 945.4668291370899 945.4657299358599 24.28 2 0.11810274128120403 0.0018007399404118783 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 75925 8026 NRDVPNETL True PC9_epitope_Rep5 1056.51998690876 1056.5188899358602 35.81 2 0.1180972586423104 0.0018007399404118783 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 72235 13239 MRYNEKELQAL True PC9_epitope_Rep5 1393.70238502817 1393.7012899358601 55.933 2 0.11807872624093216 0.0018007399404118783 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 88399 16108 QYPVYWDHLEF True NCI_RA007_Epitope_Rep3 1495.67721582615 1495.67610993586 71.061 2 0.11807811140808513 0.0018007399404118783 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21'] 14241 3982 DSYVGDEAQSK True H1975_Epitope_Rep3 1197.51496109797 1197.5138699358602 20.443 2 0.11807689565670866 0.0018007399404118783 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 97898 12525 SHLVATVTV True PC9_epitope_Rep3 925.52328138405 925.52218993586 53.202 2 0.11807532458358633 0.0018007399404118783 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 28920 20398 FTEGELMSV True PC9_epitope_Rep3 1011.4582981689899 1011.45720993586 83.712 2 0.11807166781772122 0.0018007399404118783 0.9438714419765777 ['STK11|p.P281Rfs*6|1|0.82|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENSG00000118046|ENST00000326873|STK11', 'STK11|p.M51Ifs*112|1|0.39|ENSG00000118046|chr19:1207065-1207066|-/C|frameshift_variant'] 102914 17326 SQIHDIVLV True PC9_epitope_Rep1 1022.5760452328999 1022.5754749679301 71.458 1 0.1180605283353197 0.0018007399404118783 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 116231 20260 TVTTVILEV True PC9_epitope_Rep4 973.5695628701299 973.56846993586 86.073 2 0.11805690623392978 0.0018007399404118783 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 94828 13447 RYLTVATVF True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 58.917 2 0.11803984324297354 0.0018007399404118783 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 687 12153 AAVDATVNQVL True NCI_RA007_Epitope_Rep5 1099.58733819259 1099.58624993586 53.401 2 0.11803775250057096 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 86174 20700 QPSSLLPLA True PC9_epitope_Rep1 924.5280324113199 924.52748496793 84.449 1 0.11803741418763301 0.0018007399404118783 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 108345 4700 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 23.171 2 0.11803694884448523 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 90600 5355 RKISNNITL True NCI_RA007_Epitope_Rep5 1057.62439240765 1057.6232899358602 27.289 2 0.11803543523439256 0.0018007399404118783 0.9438714419765777 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 16868 13303 EFTNVYIK True PC9_epitope_Rep5 1012.5229470308799 1012.52184993586 56.181 2 0.11802997493310681 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4', 'ENSG00000254535|ENST00000421491|PABPC4L'] 120438 7388 VFTSRSAAF True NCI_RA007_Epitope_Rep3 984.5028802926398 984.50178993586 36.188 2 0.11802494759567078 0.0018007399404118783 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 113825 8925 TREDAGSYTL True PC9_epitope_Rep2 1111.51456717515 1111.51346993586 39.687 2 0.11801619466075557 0.0018007399404118783 0.9438714419765777 ['ENSG00000204941|ENST00000342951|PSG5', 'ENST00000401992.1_1_19:43687564-43690557:-|nuORF', 'ENST00000600817.5_1_19:43679971-43690557:-|nuORF', 'nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11', 'ENST00000599245.1_1_19:43528837-43530575:-|nuORF', 'ENSG00000242221|ENST00000406487|PSG2', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 40812 14973 HVIGSLAEI True PC9_epitope_Rep4 937.5232813840499 937.52218993586 65.532 2 0.11800600298674396 0.0018007399404118783 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant', 'nc|ENSG00000133704|O15397-2|IPO8'] 138282 18100 YQYLLVTAL True NCI_RA007_Epitope_Rep4 1082.60119735158 1082.60010993586 78.319 2 0.11797772716700321 0.0018007399404118783 0.9438714419765777 ['ENSG00000165389|ENST00000298130|SPTSSA'] 103575 15972 SRDGMNIVL True PC9_epitope_Rep1 1003.5120650773499 1003.51096993586 66.243 2 0.11797522177416346 0.0018007399404118783 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 126929 13106 VPVEQAVSV True PC9_epitope_Rep4 926.5072969667398 926.50618993586 58.306 2 0.11796487814320313 0.0018007399404118783 0.9438714419765777 ['ENSG00000131899|ENST00000316843|LLGL1'] 71847 19778 MPFGNVVSA True PC9_epitope_Rep5 920.4425885351999 920.44203496793 81.121 1 0.11796179853205949 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 23001 16482 EVISKLYAV True PC9_epitope_Rep1 1020.5855472874398 1020.5849749679301 68.224 1 0.11795582684870289 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 136916 13735 YKDGTELEL True PC9_epitope_Rep5 1066.51825557326 1066.51767496793 57.854 1 0.11794931310811405 0.0018007399404118783 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 43569 19138 IIEQEEKIL True PC9_epitope_Rep2 1113.6281403754099 1113.6270499358602 78.984 2 0.1179450743719292 0.0018007399404118783 0.9438714419765777 ['ENSG00000175820|ENST00000322527|CCDC168'] 22184 8235 ETDAQSITY True H1975_Epitope_Rep2 1026.4505699362599 1026.4494699358602 36.627 2 0.11794238353034746 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 102602 22148 SQAPFIVAL True PC9_epitope_Rep1 944.5331177917599 944.53256496793 90.007 1 0.1179385503622293 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 105792 22102 SVIIPGMTL True PC9_epitope_Rep1 929.52558988317 929.52448993586 89.827 2 0.11793659779357045 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 54100 14517 KYMDVQFDF True NCI_RA007_Epitope_Rep5 1191.52704643515 1191.5259499358601 62.516 2 0.1179332857021017 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 103133 21715 SQMATILNL True PC9_epitope_Rep1 989.5215671318899 989.52101496793 88.359 1 0.11793083684646823 0.0018007399404118783 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 74813 17238 NLPDEIYHV True PC9_epitope_Rep2 1098.5345743437401 1098.53346993586 71.567 2 0.11792546581033563 0.0018007399404118783 0.9438714419765777 ['ENSG00000148335|ENST00000372483|NTMT1'] 73270 5631 NEIKDSVVA True H1975_Epitope_Rep1 973.5080252427299 973.50692993586 26.728 2 0.11791506150045164 0.0018007399404118783 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 4166 21017 AIAPIIAAV True PC9_epitope_Rep3 837.53238951577 837.53128993586 86.119 2 0.11791404237286862 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF'] 89135 11675 REFSDFIRV True NCI_RA007_Epitope_Rep4 1167.6036569630699 1167.60254993586 51.868 2 0.11790017024870161 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 102250 12478 SPTGGFVDA True PC9_epitope_Rep3 849.3868474808899 849.3862949679301 53.022 1 0.1178941749573511 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 14333 14701 DTDLFSQPTY True H1975_Epitope_Rep3 1185.51898384925 1185.51788993586 61.92 2 0.11788857303440368 0.0018007399404118783 0.9438714419765777 ['DGKE|p.S555Ffs*10|1|0.2|ENSG00000153933|chr17:56862749-56862756|CTCTAGTA/-|frameshift_variant', 'ENSG00000153933|ENST00000284061|DGKE', 'nc|ENSG00000153933|P52429-2|DGKE', 'ENST00000576869.5_1_17:54912147-54924989:+|nuORF'] 83247 15410 QADLINELY True H1975_Epitope_Rep3 1077.53423999057 1077.53367496793 64.685 1 0.11788159486108302 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 60071 15051 LHSLGSVSL True PC9_epitope_Rep1 911.50763131991 911.50652993586 62.711 2 0.11788129967856148 0.0018007399404118783 0.9438714419765777 ['TNS4-CCR7|1|fusion', 'ENSG00000131746|ENST00000254051|TNS4'] 44611 12868 IPHSLPGAVAA True PC9_epitope_Rep1 1031.5763795860698 1031.5752899358602 54.371 2 0.11787733608742161 0.0018007399404118783 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 24059 11016 EYQIKTNQL True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 47.693 2 0.11787445332408956 0.0018007399404118783 0.9438714419765777 ['ENST00000602574.5_1_10:22607528-22607842:+|nuORF', 'ENST00000602395.1_1_10:22607528-22615407:+|nuORF', 'ENST00000496071.5_1_10:22607528-22608924:+|nuORF', 'ENST00000463409.6_1_10:22605382-22615407:+|nuORF', 'ENSG00000148444|ENST00000376836|COMMD3'] 138265 15040 YQVGVHYEL True PC9_epitope_Rep4 1106.5396597241802 1106.53856993586 65.783 2 0.11787325927564374 0.0018007399404118783 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 74791 21037 NLNPEFISV True PC9_epitope_Rep1 1031.5287606873098 1031.52817496793 85.749 1 0.11787030150393857 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 91865 8515 RPNPPPVSV True PC9_epitope_Rep5 961.53451477409 961.53340993586 37.695 2 0.1178544765588459 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 38826 5236 HIEIGPDGR True NCI_RA007_Epitope_Rep2 992.5039429217999 992.50284993586 24.988 2 0.11785097299485929 0.0018007399404118783 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF', 'ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF'] 107999 10164 [Acetylation]-TDAAVSFAK True H1975_Epitope_Rep3 950.47091177432 950.4703649679301 44.138 1 0.11784771271563593 0.0018007399404118783 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant'] 112734 11104 TPIVGQPSIPG True H1975_Epitope_Rep3 1064.5866099165999 1064.58550993586 47.805 2 0.117843589024475 0.0018007399404118783 0.9438714419765777 ['CON__P12763'] 94928 7865 RYPDSHQLF True NCI_RA007_Epitope_Rep5 1161.55670677065 1161.5550749037902 36.948 3 0.11783295316088747 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 138057 20901 YQDPVTLQL True PC9_epitope_Rep5 1075.55497543515 1075.55447496793 85.45 1 0.11782923353037361 0.0018007399404118783 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 13032 18502 DLQSNLLQV True PC9_epitope_Rep2 1028.5502244078798 1028.54912993586 76.504 2 0.11782855681630698 0.0018007399404118783 0.9438714419765777 ['ENSG00000131067|ENST00000336431|GGT7'] 134896 13278 YADPGVSFY True H1975_Epitope_Rep1 1017.44436235701 1017.44377496793 56.175 1 0.11782708156036432 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 117153 13293 TYSPALNKM[Oxidation]F True PC9_epitope_Rep5 1186.5692459807399 1186.5681499358602 56.143 2 0.11782085038573004 0.0018007399404118783 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 34568 12387 GQFSGFPFEK True NCI_RA007_Epitope_Rep4 1142.53965972418 1142.53856993586 54.643 2 0.1178206884266097 0.0018007399404118783 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 95668 12035 SAVTNIPHV True PC9_epitope_Rep1 936.50288029264 936.50178993586 51.153 2 0.11781897532232863 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'TTC3|p.E1565Kfs*6|1|0.26|ENSG00000182670|chr21:37182841-37182841|A/-|frameshift_variant', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF'] 138363 10929 YRDETLSGSEL True PC9_epitope_Rep4 1268.5884603913998 1268.5873699358601 49.808 2 0.11781183229959265 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 64013 4316 LQDAEIAR True NCI_RA007_Epitope_Rep5 914.4821448480599 914.48104993586 23.197 2 0.11781070611165831 0.0018007399404118783 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 53419 15442 KVGEAGLLSV True PC9_epitope_Rep1 971.5651461960299 971.56404993586 64.218 2 0.11780557023241321 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 48697 7456 KEMENFEAP True H1975_Epitope_Rep3 1093.4750108622898 1093.47390993586 33.658 2 0.11780228122390156 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 6322 4448 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 23.568 2 0.11779178742187896 0.0018007399404118783 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 20619 9752 EQEVNILK True PC9_epitope_Rep5 971.5287606873098 971.52766993586 42.481 2 0.11779131295079112 0.0018007399404118783 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 130473 17615 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.48982993586 72.765 2 0.11778797948181258 0.0018007399404118783 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 138417 10856 YRDPYTGQSV True PC9_epitope_Rep2 1184.5462016566 1184.5451099358602 47.076 2 0.11778072063284413 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 114030 6567 TRM[Oxidation]STVSEL True PC9_epitope_Rep1 1038.5015603437398 1038.50046993586 30.065 2 0.11777890504243686 0.0018007399404118783 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 31508 8297 GEESPLETAA True H1975_Epitope_Rep2 1002.45056993626 1002.4499749679301 36.865 1 0.11777633761028311 0.0018007399404118783 0.9438714419765777 ['ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 88082 17060 QVVIFVKSV True PC9_epitope_Rep5 1017.6222671493299 1017.6211699358599 70.64 2 0.11777549392256131 0.0018007399404118783 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF', 'ENST00000474961.5_1_6:31498213-31499248:-|nuORF', 'ENST00000462256.5_1_6:31498213-31500844:-|nuORF'] 110111 9740 TIAPALVSK True PC9_epitope_Rep3 898.5487678559 898.54766993586 42.42 2 0.11776204762885523 0.0018007399404118783 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 47123 13753 IVYPKPTWL True H1975_Epitope_Rep2 1115.63791721347 1115.63682993586 58.046 2 0.11775837746485467 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000155275|Q8IYL2-2|TRMT44', 'ENSG00000155275|ENST00000389737|TRMT44'] 68409 12135 LTTEVHPEL True PC9_epitope_Rep2 1037.5393253710097 1037.53822993586 51.987 2 0.11775677465396202 0.0018007399404118783 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 13890 7486 DRDPASGTAL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 33.745 2 0.11775555841087952 0.0018007399404118783 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 113383 19288 TQLGPPYHIL True PC9_epitope_Rep3 1137.61824439805 1137.6171499358602 79.412 2 0.11775476626796733 0.0018007399404118783 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 42145 7032 IEESGEHIIA True H1975_Epitope_Rep2 1096.540053647 1096.53894993586 31.974 2 0.11775345802646915 0.0018007399404118783 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 112964 20289 TPSIPVLTA True PC9_epitope_Rep1 897.51713337445 897.51658496793 82.868 1 0.11775188530055844 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 109542 6115 THAPATLEA True PC9_epitope_Rep1 909.45559574705 909.45448993586 28.336 2 0.11775148233615707 0.0018007399404118783 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 102326 6640 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 30.564 2 0.11774942400306676 0.0018007399404118783 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 117018 15004 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.5233099358602 65.651 2 0.11774818446138587 0.0018007399404118783 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 113161 20031 TQDAVPLTL True PC9_epitope_Rep5 956.51786165044 956.51731496793 82.101 1 0.11773974833642942 0.0018007399404118783 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 113427 19387 TQNDIISTL True PC9_epitope_Rep2 1003.51858992643 1003.51748993586 79.95 2 0.11773670367319193 0.0018007399404118783 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 94875 11915 RYNPNLNTW True PC9_epitope_Rep6 1176.5676058075198 1176.56650993586 57.07 2 0.11773550172953805 0.0018007399404118783 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 75535 22112 NQLDSLMGL True PC9_epitope_Rep5 989.48518162317 989.48408993586 90.088 2 0.11773188685592148 0.0018007399404118783 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 124347 19978 VLDSEGYLLFY True H1975_Epitope_Rep2 1317.6492697428098 1317.64816993586 82.823 2 0.11771332545330934 0.0018007399404118783 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 13871 8809 DRDGAQEVL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 38.828 2 0.11770657374514691 0.0018007399404118783 0.9438714419765777 ['TAF1A|p.G251E|1|0.42|ENSG00000143498|chr1:222569652-222569652|C/T|missense_variant', 'ENST00000480065.1_1_1:222742724-222743894:-|nuORF', 'nc|ENSG00000143498|Q15573-2|TAF1A', 'ENSG00000143498|ENST00000352967|TAF1A'] 8040 10464 ATDVNDALGY True H1975_Epitope_Rep3 1037.4665543535698 1037.46544993586 45.312 2 0.11770445720447101 0.0018007399404118783 0.9438714419765777 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 76524 12674 NTDNLLTEY True H1975_Epitope_Rep1 1081.49276910141 1081.49217496793 53.804 1 0.11770307598130285 0.0018007399404118783 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF'] 75784 12741 NRAPQLLIA True PC9_epitope_Rep4 994.5923640033799 994.5912699358599 56.867 2 0.1176998719425067 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 40203 6899 HRGTGIAL True PC9_epitope_Rep3 823.46643521427 823.46532993586 31.552 2 0.11769740207304126 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 16500 9493 EENFAVEA True H1975_Epitope_Rep2 907.3923267841499 907.39122993586 41.483 2 0.11769506275352459 0.0018007399404118783 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 71104 11410 METEVIEQV True H1975_Epitope_Rep2 1076.5059766374 1076.5048699358601 48.938 2 0.11768789786144673 0.0018007399404118783 0.9438714419765777 ['ENSG00000113716|ENST00000502717|HMGXB3'] 70733 15158 M[Oxidation]EALPLLAA True H1975_Epitope_Rep1 943.5048548190299 943.50430496793 63.565 1 0.11768516555496208 0.0018007399404118783 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 35532 8697 GTIFGIYRK True NCI_RA007_Epitope_Rep4 1053.5971150306498 1053.5960099358601 40.243 2 0.1176809580831588 0.0018007399404118783 0.9438714419765777 ['ENSG00000165140|ENST00000375326|FBP1'] 132448 10497 VYNSEYYHF True NCI_RA007_Epitope_Rep4 1220.5138388991602 1220.5132749679299 47.226 1 0.11767658493019685 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 7662 4942 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep1 990.4618036426001 990.46070993586 23.871 2 0.11767444002475537 0.0018007399404118783 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 72266 19559 MSDLLSPLLY True H1975_Epitope_Rep3 1150.59439771898 1150.5938749679299 81.952 1 0.11767174059162365 0.0018007399404118783 0.9438714419765777 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 47505 15686 IYLEKLKTI True PC9_epitope_Rep3 1119.69034670915 1119.68924993586 65.479 2 0.11766495192838673 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 135816 14493 YEQDFAVLTA True H1975_Epitope_Rep2 1155.54480467427 1155.54370993586 60.904 2 0.11765432789461876 0.0018007399404118783 0.9438714419765777 ['ENST00000489142.5_1_10:114207101-114244859:+|nuORF', 'ENST00000472892.1_1_10:114207101-114208650:+|nuORF', 'ENST00000483122.1_1_10:114207101-114208174:+|nuORF', 'ENST00000494728.5_1_10:114207101-114224455:+|nuORF', 'ENST00000480057.1_1_10:114207131-114286932:+|nuORF', 'nc|ENSG00000151532|Q96AJ9-1|VTI1A', 'ENSG00000151532|ENST00000393077|VTI1A', 'ENST00000496445.5_1_10:114207101-114298148:+|nuORF'] 6305 5687 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 27.262 2 0.11764353302817429 0.0018007399404118783 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 26010 5497 FHDESTQV True PC9_epitope_Rep5 961.41412485789 961.41302993586 26.153 2 0.11764310646060552 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 2517 7971 AEQRVPLSV True H1975_Epitope_Rep2 997.5556441414899 997.55454993586 35.607 2 0.11763838658071613 0.0018007399404118783 0.9438714419765777 ['ENSG00000125826|ENST00000356286|RBCK1'] 27693 8505 FQDGTKATF True PC9_epitope_Rep2 1013.4818104948899 1013.48070993586 38.079 2 0.11763454041552814 0.0018007399404118783 0.9438714419765777 ['ENSG00000110711|ENST00000279146|AIP'] 35817 17318 GTYTGFIKV True PC9_epitope_Rep1 984.5280324113198 984.52692993586 71.429 2 0.11763094739357323 0.0018007399404118783 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 84101 15573 QEQGDAPAILF True H1975_Epitope_Rep2 1187.5822528121496 1187.5811499358601 65.058 2 0.1176236025872675 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32918272-32920828:-|nuORF', 'ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 101988 8880 SPNMANTVNA True PC9_epitope_Rep1 1017.45494412405 1017.45384993586 38.996 2 0.11760879076164989 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 22180 8231 ETDAQSITY True H1975_Epitope_Rep1 1026.4505699362599 1026.4499749679298 36.605 1 0.11760272157465969 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 9563 21313 AYANIISQF True PC9_epitope_Rep3 1025.5181960036098 1025.51767496793 87.276 1 0.11760042306923198 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-2|SLC47A2'] 4385 11957 AIRLELQGPR True PC9_epitope_Rep1 1151.6774906096698 1151.67583490379 50.86 3 0.11759858487221417 0.0018007399404118783 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 17302 7728 EHDPHVLLA True PC9_epitope_Rep4 1029.5243440132099 1029.5232499358601 37.114 2 0.11759420985190944 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 89269 6997 RELEDDARVIA True H1975_Epitope_Rep2 1285.6626283911698 1285.66152993586 31.838 2 0.11758787993393396 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 11696 6044 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 28.64 2 0.11758565634724318 0.0018007399404118783 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 59813 16043 LHDENILL True PC9_epitope_Rep5 965.51819600361 965.51708993586 66.698 2 0.11758361615508515 0.0018007399404118783 0.9438714419765777 ['ENSG00000103494|ENST00000647211|RPGRIP1L', 'nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L'] 9942 19377 AYQSIQNYL True PC9_epitope_Rep4 1098.53457434374 1098.53346993586 82.643 2 0.11757626894826269 0.0018007399404118783 0.9438714419765777 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 103458 13953 SRAGLQFPV True PC9_epitope_Rep6 973.53451477409 973.53340993586 65.523 2 0.1175745066060852 0.0018007399404118783 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC4|p.R30Q|1|0.07|ENSG00000278463|chr6:26033480-26033480|C/T|missense_variant', 'H2AC13|p.R30P|1|0.16|ENSG00000196747|chr6:27808298-27808298|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 98007 8831 SHSSFQASL True PC9_epitope_Rep2 962.44575933934 962.44466993586 39.32 2 0.11757344378902324 0.0018007399404118783 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 127325 9346 VQNDVRITL True NCI_RA007_Epitope_Rep3 1056.5927579262 1056.5916699358602 43.856 2 0.11757083097171489 0.0018007399404118783 0.9438714419765777 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 77441 8665 NYNNQSSNF True PC9_epitope_Rep3 1086.4366512076201 1086.43554993586 38.279 2 0.11756912236973703 0.0018007399404118783 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 109800 11385 THITAQTAVL True PC9_epitope_Rep5 1053.58185888933 1053.5807699358602 48.791 2 0.11756705436597918 0.0018007399404118783 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 84192 6249 QESTVIRAP True NCI_RA007_Epitope_Rep4 999.5349086969098 999.53380993586 30.642 2 0.11756596408852889 0.0018007399404118783 0.9438714419765777 ['ENSG00000128849|ENST00000281282|CGNL1'] 48758 10038 KEQEWSMAV True H1975_Epitope_Rep2 1106.5066453437398 1106.50554993586 43.602 2 0.11756583438025811 0.0018007399404118783 0.9438714419765777 ['ENSG00000122126|ENST00000371113|OCRL', 'nc|ENSG00000122126|Q01968-2|OCRL'] 14848 13461 DYFEEYGK True PC9_epitope_Rep2 1049.4341915961297 1049.4330899358602 57.056 2 0.1175438293019126 0.0018007399404118783 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 75042 16008 NM[Oxidation]DTFSNLLY True H1975_Epitope_Rep2 1232.53833977528 1232.53724993586 66.773 2 0.11753871908233182 0.0018007399404118783 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 66599 7248 LSSPATLNSR True PC9_epitope_Rep5 1044.5563724174801 1044.55526993586 32.842 2 0.11753701979560303 0.0018007399404118783 0.9438714419765777 ['CON__P00761'] 75460 20408 NQIEELPSL True PC9_epitope_Rep3 1041.5342399905699 1041.5331499358601 83.752 2 0.1175345436142469 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000133067|Q9HBX8-1|LGR6', 'nc|ENSG00000133067|Q9HBX8-2|LGR6', 'ENSG00000133067|ENST00000367278|LGR6'] 108725 9351 TEMPGTLQA True H1975_Epitope_Rep2 946.4429824580199 946.44188993586 40.93 2 0.11753238494323319 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 138593 10680 YRQKQVVIL True PC9_epitope_Rep1 1145.6920780446499 1145.69044490379 45.971 3 0.11751845400799983 0.0018007399404118783 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 26553 9024 FIVNTNVPR True H1975_Epitope_Rep3 1058.58727862294 1058.5861899358601 39.705 2 0.11750972262582071 0.0018007399404118783 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 84545 13088 QHAVEAISL True PC9_epitope_Rep1 966.5134449763399 966.51234993586 55.211 2 0.11750875931155962 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 74795 20947 NLNPEFISV True PC9_epitope_Rep3 1031.5287606873098 1031.52817496793 85.85 1 0.11750354744603021 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 125995 9423 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.49088993586 43.856 2 0.11749532307300718 0.0018007399404118783 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 127231 20992 VQIGDIVTV True PC9_epitope_Rep5 942.5385970950199 942.5380449679301 85.808 1 0.11749465417917765 0.0018007399404118783 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 21112 13760 ERDPSPWAV True PC9_epitope_Rep2 1055.50360856863 1055.5025099358602 58.215 2 0.11749098238087967 0.0018007399404118783 0.9438714419765777 ['ENST00000394920.6_1_8:146017501-146017656:-|nuORF'] 61352 4943 LLEGEESR True PC9_epitope_Rep3 931.4610750503099 931.45996993586 24.106 2 0.1174897334878633 0.0018007399404118783 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 38514 4149 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 22.881 2 0.11748382991129676 0.0018007399404118783 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 102584 15583 SQANIAQVL True PC9_epitope_Rep6 942.5134449763399 942.51234993586 72.15 2 0.11748378198325889 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 103058 16803 SQLEDAIRL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 72.603 2 0.11747359160982182 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2', 'ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 47915 21940 IYVPVSLGF True PC9_epitope_Rep4 993.55351888317 993.55242993586 92.602 2 0.11745545889176011 0.0018007399404118783 0.9438714419765777 ['ENSG00000172818|ENST00000335987|OVOL1'] 98551 16780 SILSNIHEV True PC9_epitope_Rep1 1010.53965972418 1010.53856993586 69.369 2 0.11745215758017899 0.0018007399404118783 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1', 'ABCA1|p.Q1986E|1|0.35|ENSG00000165029|chr9:104788539-104788539|G/C|missense_variant'] 117000 10939 TYQDIQNTI True NCI_RA007_Epitope_Rep2 1094.52440358286 1094.5233099358602 47.157 2 0.11745022767311047 0.0018007399404118783 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 29398 21260 FVFEPPPGV True PC9_epitope_Rep2 987.5065686907498 987.50546993586 87.237 2 0.1174473825867868 0.0018007399404118783 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000555102.1_1_14:102508745-102509707:+|nuORF'] 95409 20165 SAIVNLPGC True PC9_epitope_Rep5 872.4425885351999 872.44148993586 82.613 2 0.11743063977568059 0.0018007399404118783 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 53794 16325 KYFLKPEVL True PC9_epitope_Rep5 1135.6641319613097 1135.66249490379 67.79 3 0.11742517577505227 0.0018007399404118783 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 17398 11836 EHFNGVAEL True PC9_epitope_Rep6 1014.4770594676198 1014.47596993586 56.735 2 0.11742400219536737 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'PPP2R5A|p.E251Q|1|0.1|ENSG00000066027|chr1:212347393-212347393|G/C|missense_variant', 'nc|ENSG00000068971|Q15173-2|PPP2R5B', 'ENSG00000068971|ENST00000164133|PPP2R5B', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E'] 52760 20053 KQMPVIMVI True PC9_epitope_Rep1 1057.60279465805 1057.6016899358601 81.959 2 0.11742166172566884 0.0018007399404118783 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 95277 21885 SADTTILFV True PC9_epitope_Rep1 965.50696261357 965.50586993586 88.993 2 0.11741429647799925 0.0018007399404118783 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 130475 14887 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 69.249 2 0.1174127623780438 0.0018007399404118783 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 38931 20871 HIPDVITYL True PC9_epitope_Rep3 1069.58079626017 1069.5796899358602 85.552 2 0.11741157935407712 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 102332 5410 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 27.54 2 0.11740874921029647 0.0018007399404118783 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 59966 17497 LHNDGIYIM True PC9_epitope_Rep3 1074.51681610462 1074.51570993586 72.478 2 0.11740548890092069 0.0018007399404118783 0.9438714419765777 ['ENSG00000087448|ENST00000381271|KLHL42'] 94 15056 AAAPVVPAV True PC9_epitope_Rep5 793.4697892592098 793.46868993586 62.919 2 0.1174018280531252 0.0018007399404118783 0.9438714419765777 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 96819 8966 SESFVSPEA True H1975_Epitope_Rep2 951.41854153199 951.4179949679301 39.442 1 0.11739753533572386 0.0018007399404118783 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 8272 4373 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 23.438 2 0.11739672533894292 0.0018007399404118783 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 68102 6950 LTPEELER True NCI_RA007_Epitope_Rep1 985.5080252427299 985.50692993586 31.038 2 0.11738975011277698 0.0018007399404118783 0.9438714419765777 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 95487 18280 SAMTEEAAVAI True PC9_epitope_Rep5 1091.5168756742698 1091.5157699358601 75.327 2 0.11738790640899163 0.0018007399404118783 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 1404 14207 AEEFPNLAVA True H1975_Epitope_Rep2 1059.5236753068698 1059.52256993586 59.799 2 0.11738680704384236 0.0018007399404118783 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 52673 20215 KQFGNILIL True PC9_epitope_Rep2 1044.6331661861998 1044.63206993586 83.174 2 0.11738621445173207 0.0018007399404118783 0.9438714419765777 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS', 'SMS|p.G166W|1|0.32|ENSG00000102172|chrX:21977227-21977227|G/T|missense_variant', 'ENST00000436365.1_1_X:47577979-47578291:-|nuORF'] 112294 13774 TMAKESSIIGV True PC9_epitope_Rep1 1134.59546034814 1134.5943699358602 57.828 2 0.11738241434513128 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 20972 19588 ERADLIAYL True PC9_epitope_Rep4 1062.57095985246 1062.5698699358602 83.467 2 0.11737954071026156 0.0018007399404118783 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 31769 10537 GELLFVHSA True NCI_RA007_Epitope_Rep3 971.50763131991 971.50652993586 48.504 2 0.11737380731193521 0.0018007399404118783 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 36673 19460 GVLSDLTKV True PC9_epitope_Rep1 930.53859709502 930.53750993586 79.669 2 0.11737113603718827 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 94908 14371 RYPDRITLI True PC9_epitope_Rep2 1145.65569253593 1145.65458993586 60.539 2 0.11736993419948447 0.0018007399404118783 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 62655 17938 LLVTKNWL True PC9_epitope_Rep2 985.5960524014899 985.59494993586 74.303 2 0.11736459835805874 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 118610 13585 VEALTTLEVA True H1975_Epitope_Rep1 1044.5702911461199 1044.56918993586 57.383 2 0.11736262456167844 0.0018007399404118783 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 4310 6893 AILGIHNEVSK True NCI_RA007_Epitope_Rep1 1179.6611718391898 1179.65953490379 30.815 3 0.11735739007895148 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 75474 15056 NQIKEFIYA True PC9_epitope_Rep4 1124.5866099165999 1124.58550993586 65.843 2 0.11735676551508771 0.0018007399404118783 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 86562 11779 QRATIDPEL True PC9_epitope_Rep3 1041.5454733806098 1041.54436993586 50.326 2 0.117354989132654 0.0018007399404118783 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1'] 58138 7614 LESELIKSA True H1975_Epitope_Rep3 988.5440763982799 988.54296993586 34.268 2 0.1173529004312334 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion'] 115207 8950 TVAVPLVGK True NCI_RA007_Epitope_Rep1 882.5538532363399 882.55274993586 38.813 2 0.11735182899334794 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 8245 22491 ATIIQLFQV True PC9_epitope_Rep4 1031.6015317047497 1031.6004299358601 94.743 2 0.1173416383236971 0.0018007399404118783 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 105536 2612 SVDPKNYPK True NCI_RA007_Epitope_Rep3 1046.53965972418 1046.53856993586 14.739 2 0.11733752660063657 0.0018007399404118783 0.9438714419765777 ['ENST00000491056.5_1_2:113587940-113590763:-|nuORF', 'ENSG00000125538|ENST00000263341|IL1B'] 55 12670 AAAGSPVFL True H1975_Epitope_Rep1 831.44905381463 831.44850496793 53.789 1 0.11732356263946282 0.0018007399404118783 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 5181 21068 ALPEIFTEL True PC9_epitope_Rep6 1031.55391280599 1031.55280993586 93.862 2 0.11732209567537752 0.0018007399404118783 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 77631 20412 NYVQAVEEF True PC9_epitope_Rep3 1097.5029398622898 1097.50184993586 83.767 2 0.11732157064602468 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 1143 6069 AEAPSPAPTP True H1975_Epitope_Rep2 936.4552613938799 936.45471496793 28.321 1 0.11731645329471938 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'ENST00000525051.5_1_8:144873596-144874681:-|nuORF'] 70951 16140 MENEFLLPP True H1975_Epitope_Rep2 1088.5212327787199 1088.52012993586 67.295 2 0.11731343675026445 0.0018007399404118783 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 13197 19363 DLTDYLMK True PC9_epitope_Rep4 997.47903361357 997.47792993586 82.59 2 0.11731183459571426 0.0018007399404118783 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 85132 10080 QITQINHGL True PC9_epitope_Rep1 1022.5508931142199 1022.5497899358601 43.643 2 0.11731087446229357 0.0018007399404118783 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 136129 9916 YGGGYGGQSSM True PC9_epitope_Rep5 1062.40765957846 1062.40656993586 43.113 2 0.11730272524753323 0.0018007399404118783 0.9438714419765777 ['ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000515481.5_1_5:179043097-179043181:-|nuORF', 'ENST00000502632.5_1_5:179042549-179043984:-|nuORF'] 3991 19435 AHFPINVVI True PC9_epitope_Rep4 1008.5756513100799 1008.57454993586 82.87 2 0.11729554774097588 0.0018007399404118783 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 136650 6228 YIDQEELNK True NCI_RA007_Epitope_Rep2 1150.5506183307 1150.5495299358602 28.832 2 0.117291365481756 0.0018007399404118783 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 89599 5484 RESPFSTSA True H1975_Epitope_Rep2 980.45632402304 980.45522993586 26.108 2 0.11728733432766178 0.0018007399404118783 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 43567 15964 IIEPSLRQLAQ True PC9_epitope_Rep4 1266.72958575218 1266.7284899358601 69.335 2 0.11728519468536185 0.0018007399404118783 0.9438714419765777 ['ENSG00000221983|ENST00000442744|UBA52'] 21566 15651 ERSDTFINL True PC9_epitope_Rep6 1093.54038800017 1093.53928993586 72.405 2 0.11727732788243508 0.0018007399404118783 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 70012 16263 LYGKIAEAF True PC9_epitope_Rep2 1010.5436824754598 1010.54258993586 67.796 2 0.11726017883489144 0.0018007399404118783 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 137335 22244 YLITLLEHL True PC9_epitope_Rep2 1113.64339651673 1113.6422899358602 91.038 2 0.11725419562512927 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 87165 20610 QSLAGGIIGV True PC9_epitope_Rep1 913.5232813840499 913.52218993586 84.093 2 0.11725325231838454 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 67826 22844 LTIEDGIFEV True PC9_epitope_Rep5 1134.58085582982 1134.5802749679299 92.865 1 0.11725185604112083 0.0018007399404118783 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 129941 6274 VTNDGATILK True NCI_RA007_Epitope_Rep2 1030.56587447202 1030.56476993586 29.011 2 0.11725060230761947 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF', 'ENST00000550455.5_1_12:69979244-69981425:+|nuORF', 'ENST00000546859.5_1_12:69979244-69981900:+|nuORF', 'ENST00000550638.5_1_12:69979244-69982049:+|nuORF'] 40055 11530 HQYDGLVEL True NCI_RA007_Epitope_Rep5 1072.5189242795998 1072.5178299358602 51.001 2 0.11724584018120589 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'ENST00000550262.1_1_12:110770401-110771957:+|nuORF'] 72531 22302 MVDGTLLLL True PC9_epitope_Rep4 973.5518046310099 973.55070993586 94.023 2 0.1172375704233633 0.0018007399404118783 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 61046 20575 LLASEVPQL True PC9_epitope_Rep1 968.5542471591598 968.55314993586 83.956 2 0.11723349524677487 0.0018007399404118783 0.9438714419765777 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000467558.5_1_7:2578584-2579570:-|nuORF', 'ENST00000469750.5_1_7:2577705-2579570:-|nuORF'] 113872 17471 TRFAEVECL True PC9_epitope_Rep5 1066.5117307241799 1066.5106299358602 72.205 2 0.11723332432454549 0.0018007399404118783 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 48413 15259 KEDPFVFIP True H1975_Epitope_Rep1 1090.5698972233 1090.5688099358601 63.958 2 0.11722958991163665 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 38146 4707 HEQPGQGIAP True H1975_Epitope_Rep3 1032.4988575413597 1032.49776993586 23.231 2 0.11722908708793349 0.0018007399404118783 0.9438714419765777 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant'] 39513 8172 HPDYNNEL True PC9_epitope_Rep5 1000.4250238947601 1000.42392993586 36.375 2 0.11722673582251983 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 62781 14626 LMDHTIPEV True PC9_epitope_Rep4 1053.51648175145 1053.5153899358602 64.188 2 0.11722092766338464 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 103437 9830 SRAAEKLYL True PC9_epitope_Rep3 1049.58694426977 1049.58584993586 42.77 2 0.11720569270681172 0.0018007399404118783 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 29877 10756 FVYDEPGHAV True PC9_epitope_Rep6 1132.5189242795998 1132.5178299358602 52.199 2 0.11720400847512284 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 75435 9812 NQGESITHAL True PC9_epitope_Rep5 1068.51998690876 1068.5188899358602 42.709 2 0.11719654288238462 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 98255 8135 SIFDGRVVAK True NCI_RA007_Epitope_Rep1 1090.61349337078 1090.6123899358602 35.641 2 0.11718434906527163 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 18052 13536 EIIRQLNGV True PC9_epitope_Rep5 1040.59784330664 1040.59674993586 57.088 2 0.1171824635643245 0.0018007399404118783 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 117233 10513 TYVSGTLRF True NCI_RA007_Epitope_Rep3 1042.54474510462 1042.54364993586 48.413 2 0.11717805172105629 0.0018007399404118783 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1'] 47080 14455 IVVGRITEV True PC9_epitope_Rep1 984.5967806774798 984.59568993586 60.425 2 0.11717661400149262 0.0018007399404118783 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 116942 18081 TYPENWRAF True PC9_epitope_Rep5 1182.5458077337798 1182.54470993586 74.562 2 0.11717319713827098 0.0018007399404118783 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 41024 9215 HYGQSGISM True PC9_epitope_Rep1 978.4229157197799 978.42180993586 40.297 2 0.11716968672604454 0.0018007399404118783 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 97897 11416 SHLVATVTV True PC9_epitope_Rep2 925.52328138405 925.52218993586 49.234 2 0.11716941004173301 0.0018007399404118783 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 18049 13904 EIIRQLNGV True PC9_epitope_Rep3 1040.59784330664 1040.59674993586 58.563 2 0.11716106639543353 0.0018007399404118783 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 46809 17340 IVDPSLIHV True PC9_epitope_Rep4 991.5702315764701 991.56912993586 74.703 2 0.11715918831878297 0.0018007399404118783 0.9438714419765777 ['ENST00000488971.1_1_2:86683605-86693535:+|nuORF', 'ENSG00000115548|ENST00000312912|KDM3A'] 134939 12045 YAEVGRVL True PC9_epitope_Rep1 905.4970666362099 905.49596993586 51.191 2 0.1171532962612051 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 120321 16965 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 70.417 2 0.11714525281532129 0.0018007399404118783 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 30526 8710 GAIGSPVRL True H1975_Epitope_Rep1 868.51305105352 868.51194993586 38.429 2 0.11714434657963832 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant'] 27931 12637 FQNSGNVNL True PC9_epitope_Rep5 991.4723084403499 991.47120993586 53.611 2 0.11713351674619873 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1', 'ENST00000490523.1_1_7:6064306-6068335:-|nuORF'] 116792 15973 TYLPTSPLL True NCI_RA007_Epitope_Rep4 1003.55899818643 1003.55847496793 69.312 1 0.11712914173213636 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 23614 22889 EYFESPFTI True PC9_epitope_Rep1 1131.5124419168299 1131.5113499358602 92.838 2 0.11712720302462035 0.0018007399404118783 0.9438714419765777 ['ENSG00000198938|ENST00000362079|MT-CO3'] 23662 21568 EYGPIHILW True PC9_epitope_Rep5 1126.5811306133398 1126.58002993586 88.001 2 0.11712130593717605 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7', 'ENSG00000162627|ENST00000306121|SNX7'] 89320 8321 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64402993586 39.848 2 0.11711778157219623 0.0018007399404118783 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 97722 13344 SHFEGLITT True PC9_epitope_Rep4 1003.49746055903 1003.49636993586 59.228 2 0.1171158774468002 0.0018007399404118783 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 117027 16289 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.52387496793 67.649 1 0.11711382233497807 0.0018007399404118783 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 88775 7210 RDLEAPEV True NCI_RA007_Epitope_Rep4 927.4661604307499 927.46506993586 34.367 2 0.11711219684053532 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6'] 21288 16834 ERIPDVAAL True PC9_epitope_Rep5 982.5447451046199 982.54364993586 69.761 2 0.11711046677515746 0.0018007399404118783 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 46113 8937 ITADVNHNL True PC9_epitope_Rep1 995.50360856863 995.50250993586 39.217 2 0.11710941591031063 0.0018007399404118783 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1'] 31538 13645 GEFGGFGSV True NCI_RA007_Epitope_Rep5 855.3762827971899 855.37573496793 59.17 1 0.11710847178552672 0.0018007399404118783 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 38839 13899 HIGDAVVI True PC9_epitope_Rep1 822.4599528515 822.45884993586 58.299 2 0.11710453986207811 0.0018007399404118783 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 61728 21820 LLIPGLATA True PC9_epitope_Rep1 867.54295419947 867.5424049679301 88.739 1 0.11709831714211114 0.0018007399404118783 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 106067 19424 SVLVSVSEV True PC9_epitope_Rep1 917.50696261357 917.50641496793 79.526 1 0.11709663744752803 0.0018007399404118783 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 88516 9252 RADEHILEL True NCI_RA007_Epitope_Rep4 1094.57202248162 1094.57092993586 42.44 2 0.11709363843043342 0.0018007399404118783 0.9438714419765777 ['ENSG00000283632|ENST00000413988|EXOC3L2'] 9823 21037 AYLKAIVLF True PC9_epitope_Rep2 1036.6321035570397 1036.6310099358602 86.371 2 0.11708818447658711 0.0018007399404118783 0.9438714419765777 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 105564 13584 SVDSNLLSDY True H1975_Epitope_Rep2 1111.50333378511 1111.5022299358602 57.387 2 0.11708508952887502 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 6320 7465 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 33.718 2 0.11708479862526597 0.0018007399404118783 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 40171 14913 HRFLAEDAL True PC9_epitope_Rep1 1070.55089311422 1070.5497899358602 62.185 2 0.11706949682765817 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 130748 10860 VVDPNDPQM True PC9_epitope_Rep5 1013.44879611445 1013.44827496793 46.76 1 0.11706621611750562 0.0018007399404118783 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 96320 11139 SEEVTPIAV True H1975_Epitope_Rep2 943.4862271689899 943.4856749679301 47.882 1 0.11706239872465282 0.0018007399404118783 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 127367 9307 VQPSKYHFL True PC9_epitope_Rep6 1117.5920296502102 1117.59092993586 45.965 2 0.11706093181989694 0.0018007399404118783 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 95127 12640 RYVPRASYF True PC9_epitope_Rep5 1157.5981776598098 1157.5970899358601 53.622 2 0.11705688464250015 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 114175 6468 TRSTFSTNY True PC9_epitope_Rep6 1075.49343780775 1075.4923499358601 33.52 2 0.11705634222351274 0.0018007399404118783 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 59878 7905 LHHDDPEVL True PC9_epitope_Rep1 1073.51417325233 1073.5130699358601 35.233 2 0.11705313248397135 0.0018007399404118783 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 18816 6540 ELEDEEERDQR True NCI_RA007_Epitope_Rep1 1446.62227970082 1446.62062490379 29.452 3 0.1170524625732597 0.0018007399404118783 0.9438714419765777 ['ENSG00000253797|ENST00000521776|UTP14C'] 131969 12750 VYGFLRNGF True NCI_RA007_Epitope_Rep3 1071.5501648382299 1071.5490699358602 57.389 2 0.11705211697526635 0.0018007399404118783 0.9438714419765777 ['ENST00000343327.6_1_9:115030452-115095785:-|nuORF'] 87581 13100 QTPQRLLEV True PC9_epitope_Rep2 1082.6084079903399 1082.60730993586 55.666 2 0.11704865096201847 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 107632 18251 TAIAGLTFL True H1975_Epitope_Rep3 905.52221875489 905.52167496793 76.49 1 0.11704294768485903 0.0018007399404118783 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 34949 19576 GQWSQGLISA True PC9_epitope_Rep3 1045.5192586327698 1045.5181699358602 80.534 2 0.1170405242407079 0.0018007399404118783 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 110929 22406 TLATDILM[Oxidation]GV True PC9_epitope_Rep1 1048.547447907 1048.54634993586 91.004 2 0.11703954218621485 0.0018007399404118783 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 69038 19300 LVIDAVREI True PC9_epitope_Rep1 1026.6073453611798 1026.6062499358602 79.042 2 0.11703339799364613 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 44323 12937 IMDENNQWY True H1975_Epitope_Rep2 1211.49172355559 1211.4906299358602 54.876 2 0.1170212429539493 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'ATRX|p.C1026Vfs*7|1|0.1|ENSG00000085224|chrX:77682180-77682180|A/-|frameshift_variant', 'nc|ENSG00000085224|P46100-6|ATRX'] 94940 12182 RYPDSHQLF True PC9_epitope_Rep5 1161.55670677065 1161.55560993586 51.847 2 0.11701811666877607 0.0018007399404118783 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 18016 14850 EIIDLVLDR True H1975_Epitope_Rep1 1084.61282466444 1084.61172993586 62.352 2 0.11701099191737488 0.0018007399404118783 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 1389 8477 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49109496793 37.559 1 0.1169907994353833 0.0018007399404118783 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 108548 8537 TEGGGVFTA True H1975_Epitope_Rep2 837.38684748089 837.3862949679301 37.792 1 0.11698801448141673 0.0018007399404118783 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 37723 9768 HASDRIIAL True PC9_epitope_Rep2 994.5559784946599 994.55488993586 42.911 2 0.11698505581180164 0.0018007399404118783 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 99482 9967 SLEPVAVELK True H1975_Epitope_Rep1 1083.6175756917098 1083.61646993586 43.274 2 0.11697165758255978 0.0018007399404118783 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 120587 11811 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.4641549679301 50.507 1 0.116968051611029 0.0018007399404118783 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 72072 19956 MRDDTMWQL True PC9_epitope_Rep5 1194.5161644816199 1194.51506993586 81.813 2 0.11696799674522677 0.0018007399404118783 0.9438714419765777 ['ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5', 'PLEKHA5-AEBP2|4|fusion', 'PLEKHA5-AEBP2|2|fusion', 'PLEKHA5-AEBP2|3|fusion', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'PLEKHA5-AEBP2|10|fusion', 'PLEKHA5-AEBP2|8|fusion', 'PLEKHA5-AEBP2|9|fusion', 'PLEKHA5-AEBP2|7|fusion', 'PLEKHA5-AEBP2|6|fusion', 'PLEKHA5-AEBP2|5|fusion', 'PLEKHA5-AEBP2|12|fusion', 'PLEKHA5-AEBP2|11|fusion', 'PLEKHA5-AEBP2|1|fusion'] 140567 19975 YYLNLIEL True NCI_RA007_Epitope_Rep5 1039.5589981864298 1039.5579099358602 83.749 2 0.11694147623089213 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF'] 86861 14642 QRQQLLVSL True PC9_epitope_Rep6 1083.64004247179 1083.6389499358602 68.239 2 0.11693919012759973 0.001828034210354508 0.9438714419765777 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 134422 14707 WTEMNTIVY True H1975_Epitope_Rep3 1155.52704643515 1155.5259499358601 61.943 2 0.11693403078379694 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 72204 8259 MRSPQMVSA True PC9_epitope_Rep1 1005.47357139365 1005.47246993586 36.602 2 0.11693207120492516 0.001828034210354508 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 35827 6018 GTYVSSVPR True NCI_RA007_Epitope_Rep2 964.4977949121999 964.49668993586 28.018 2 0.11693160932066549 0.001828034210354508 0.9438714419765777 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 116862 23288 TYNMVLNLL True PC9_epitope_Rep1 1079.56851732431 1079.56740993586 94.365 2 0.11691907530056597 0.001828034210354508 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 70326 16709 LYPLTNYTF True NCI_RA007_Epitope_Rep3 1130.56481184286 1130.56370993586 73.542 2 0.11691758236105353 0.001828034210354508 0.9438714419765777 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 77490 13642 NYPQSVPRL True PC9_epitope_Rep3 1072.56654317836 1072.5654499358602 57.538 2 0.1169131206173107 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 73838 10110 NHEDKIRVVL True PC9_epitope_Rep5 1221.6829699129298 1221.68131490379 43.872 3 0.11690583549040907 0.001828034210354508 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1'] 89219 8419 REIQEAIAV True H1975_Epitope_Rep2 1027.5662088251897 1027.5651099358602 37.335 2 0.11690334955062821 0.001828034210354508 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 31968 9261 GESQTLLAA True H1975_Epitope_Rep2 888.4552613938798 888.45471496793 40.58 1 0.11690281081598092 0.001828034210354508 0.9438714419765777 ['ENSG00000144747|ENST00000398559|TMF1', 'nc|ENSG00000144747|P82094-2|TMF1'] 89168 11205 REIALPIEA True H1975_Epitope_Rep2 1010.5760452328999 1010.57494993586 48.139 2 0.11690268503141837 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF', 'ENST00000576387.1_1_16:24960717-24966004:-|nuORF', 'nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1'] 53736 7801 KYEELQIT True NCI_RA007_Epitope_Rep3 1022.5284263341399 1022.5273299358599 37.808 2 0.11689716554123754 0.001828034210354508 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 76327 14089 NSEITYSFY True H1975_Epitope_Rep2 1122.48695544498 1122.48637496793 59.349 1 0.11689161539792212 0.001828034210354508 0.9438714419765777 ['PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 22385 6834 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54372993586 31.206 2 0.11688799963236621 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 109764 13799 THISDTSVVL True PC9_epitope_Rep1 1070.56078909158 1070.5596899358602 57.923 2 0.11688639097479463 0.001828034210354508 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 116934 18375 TYPENWRAF True PC9_epitope_Rep1 1182.5458077337798 1182.54470993586 75.471 2 0.11687687415693034 0.001828034210354508 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 75369 12238 NQDDSILKV True PC9_epitope_Rep4 1030.5294889632999 1030.52838993586 54.891 2 0.11686818384413725 0.001828034210354508 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 48031 19732 KALDGFVMV True PC9_epitope_Rep5 978.5208388558999 978.51974993586 80.945 2 0.116865223693746 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 47991 9764 KAIDIYEQV True NCI_RA007_Epitope_Rep4 1077.57062549929 1077.5695299358601 44.405 2 0.11686371804346599 0.001828034210354508 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA', 'ENST00000597778.5_1_19:47995938-47996286:-|nuORF'] 35001 11034 GRAPGGLSL True PC9_epitope_Rep1 826.4661008611 826.4650099358599 47.33 2 0.11686271896744613 0.001828034210354508 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 21783 13147 ESDFSNPLY True H1975_Epitope_Rep3 1070.4556553167 1070.45507496793 55.818 1 0.11686123065536459 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 21289 16929 ERIPDVAAL True PC9_epitope_Rep5 982.5447451046199 982.54364993586 70.133 2 0.1168578716445814 0.001828034210354508 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 92177 15635 RQFGFIVL True NCI_RA007_Epitope_Rep4 978.5650866263799 978.56398993586 67.917 2 0.1168545341284657 0.001828034210354508 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 140327 11408 YYEEQHPEL True PC9_epitope_Rep3 1206.5193182024198 1206.51822993586 48.883 2 0.11685325333888455 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 97706 10031 SHEEAITAL True PC9_epitope_Rep2 969.4767251144499 969.47562993586 43.909 2 0.11684778595154184 0.001828034210354508 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 70301 20971 LYPEGLAQL True PC9_epitope_Rep5 1002.5385970950199 1002.53807496793 85.725 1 0.11684330746760012 0.001828034210354508 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 103600 15727 SRDKTIIMW True PC9_epitope_Rep1 1148.60121443492 1148.59957490379 65.317 3 0.11683148187298746 0.001828034210354508 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 41210 4612 IADGYEQAAR True NCI_RA007_Epitope_Rep5 1092.5199869087598 1092.5188899358602 24.414 2 0.1168307205436893 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 77572 21067 NYSPYVNYF True PC9_epitope_Rep3 1165.50802524273 1165.50747496793 86.315 1 0.11682931286556213 0.001828034210354508 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 104199 15854 SSDGAISLLTY True H1975_Epitope_Rep3 1125.55536935797 1125.55426993586 66.432 2 0.11682366141461548 0.001828034210354508 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 107260 15536 SYPSAFSKL True PC9_epitope_Rep5 998.50729696674 998.50618993586 64.769 2 0.11682323760765025 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1', 'MARF1|p.A871Lfs*9|2|0.2|ENSG00000166783|chr16:15621761-15621761|C/-|frameshift_variant'] 44669 21369 IPLTLLPAA True PC9_epitope_Rep1 907.5742543277498 907.57314993586 87.027 2 0.1168185333494074 0.001828034210354508 0.9438714419765777 ['ENSG00000116903|ENST00000366645|EXOC8'] 102866 15087 SQHGVIIQL True PC9_epitope_Rep2 993.5607295219299 993.56018496793 63.289 1 0.11680699248928986 0.001828034210354508 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 134854 17897 YAADIVFL True H1975_Epitope_Rep2 910.48001958974 910.4794749679301 74.162 1 0.11680092229094272 0.001828034210354508 0.9438714419765777 ['COL7A1|p.G1320Wfs*40|1|0.39|ENSG00000114270|chr3:48585053-48585054|-/A|frameshift_variant', 'COL7A1|p.G2233Afs*155|1|0.17|ENSG00000114270|chr3:48573192-48573192|G/-|frameshift_variant', 'nc|ENSG00000114270|Q02388-2|COL7A1', 'ENSG00000114270|ENST00000681320|COL7A1'] 16185 9985 EEEYPGITA True H1975_Epitope_Rep3 1007.4447562798298 1007.44364993586 43.443 2 0.11679634356126342 0.001828034210354508 0.9438714419765777 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 92074 6903 RPSPPVQSV True PC9_epitope_Rep3 965.52942939365 965.52832993586 31.566 2 0.11679423378582772 0.001828034210354508 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 106879 20425 SYIEHIFEI True PC9_epitope_Rep4 1149.57062549929 1149.57007496793 86.712 1 0.11679328893080525 0.001828034210354508 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 127891 18815 VRPGILVL True PC9_epitope_Rep1 865.5749230340899 865.57382993586 77.159 2 0.11679103242237401 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000167118|Q9BTM9-2|URM1', 'ENST00000470840.5_1_9:131140285-131152010:+|nuORF', 'ENSG00000167118|ENST00000372853|URM1'] 116502 7562 TYDNVHQQF True PC9_epitope_Rep6 1150.5043368446202 1150.5032299358602 38.361 2 0.11679096851624493 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 32602 10005 GHDASQITL True PC9_epitope_Rep5 940.46140940348 940.46030993586 43.462 2 0.11678034388284345 0.001828034210354508 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 34551 19071 GQFEELLRL True PC9_epitope_Rep6 1103.5975089534697 1103.59640993586 86.0 2 0.11677820623229514 0.001828034210354508 0.9438714419765777 ['ENSG00000108010|ENST00000331244|GLRX3'] 75548 5214 NQLKNTNTI True PC9_epitope_Rep1 1044.5563724174801 1044.55526993586 24.905 2 0.11677561808391045 0.001828034210354508 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6', 'ENST00000533239.1_1_11:118656759-118656960:-|nuORF', 'ENST00000525082.1_1_11:118639020-118656960:-|nuORF'] 108256 4418 TEAPLNPKA True H1975_Epitope_Rep3 939.5025459394699 939.50144993586 22.116 2 0.11675862619029861 0.001828034210354508 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 6098 10117 APM[Oxidation]PPIIHA True PC9_epitope_Rep4 961.50552352537 961.50442993586 46.588 2 0.11675566903479959 0.001828034210354508 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 51967 8617 KKWTSVIRL True NCI_RA007_Epitope_Rep4 1129.69716342509 1129.69552490379 39.928 3 0.11675430488833609 0.001828034210354508 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 73 8381 AAAIEVHEV True PC9_epitope_Rep4 937.48689587533 937.48578993586 39.696 2 0.1167507266230154 0.001828034210354508 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 74231 14449 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 60.733 2 0.11674651160823249 0.001828034210354508 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 95656 12088 SAVPPGTSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 51.491 2 0.11674436801872104 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 8985 12151 AVHETLVAV True PC9_epitope_Rep5 937.5232813840498 937.52218993586 51.728 2 0.11674230479990136 0.001828034210354508 0.9438714419765777 ['SLC39A3|p.V234Sfs*3|1|0.26|ENSG00000141873|chr19:2732996-2732996|C/-|frameshift_variant', 'ENSG00000141873|ENST00000269740|SLC39A3'] 94570 13027 RYIPTAAAF True PC9_epitope_Rep6 1008.5392658013599 1008.53816993586 61.692 2 0.11674115937158193 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 71110 7139 M[Oxidation]ETPSIAA True H1975_Epitope_Rep2 834.3793199527398 834.3787749679301 32.393 1 0.11672695690305376 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 127056 18110 VPYPPLLRA True PC9_epitope_Rep3 1024.6069514383598 1024.60584993586 74.857 2 0.11672272100684679 0.001828034210354508 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 69648 10531 LVVSTQTALA True H1975_Epitope_Rep1 1001.5757108797299 1001.5746099358599 45.461 2 0.11672160728070297 0.001828034210354508 0.9438714419765777 ['CON__P02769'] 28071 9409 FRDQNPEQL True PC9_epitope_Rep1 1145.5465360097699 1145.54542993586 41.05 2 0.11672109415953329 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 88140 20245 QWPPDPPLHF True PC9_epitope_Rep4 1232.59784330664 1232.59674993586 86.015 2 0.11671933449925789 0.001828034210354508 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 34770 22260 GQSELTLLL True PC9_epitope_Rep3 972.54916177872 972.54806993586 90.909 2 0.1167176118035645 0.001828034210354508 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 3956 15362 AHDVDPIEL True PC9_epitope_Rep5 1007.4923751785899 1007.49126993586 64.099 2 0.1167171709123631 0.001828034210354508 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 42959 5639 IGAEVYHNLK True NCI_RA007_Epitope_Rep5 1142.60840799034 1142.60730993586 28.379 2 0.11671694619079345 0.001828034210354508 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 89118 9079 REFESAIVEA True NCI_RA007_Epitope_Rep4 1149.56660274801 1149.56550993586 41.756 2 0.116716473454828 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 75949 14943 NRFPAVNSL True PC9_epitope_Rep3 1016.5403284305199 1016.53922993586 62.611 2 0.11669897709265642 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000108587|O95249-2|GOSR1', 'ENSG00000108587|ENST00000451249|GOSR1', 'nc|ENSG00000108587|O95249|GOSR1'] 102835 20977 SQFQQEFPSL True PC9_epitope_Rep3 1209.5666027480097 1209.56550993586 85.97 2 0.11669879507464032 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 9813 13180 AYLHTTTTF True PC9_epitope_Rep5 1053.51311062317 1053.51200993586 55.702 2 0.1166859778109189 0.001828034210354508 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 105305 8126 STTQVVGILK True NCI_RA007_Epitope_Rep3 1044.6179100448799 1044.6168099358601 39.069 2 0.11668198024089738 0.001828034210354508 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 29468 22965 FVIDGFDEL True PC9_epitope_Rep1 1053.50187723313 1053.5007899358602 93.134 2 0.11667711392581488 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 73258 7054 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4601949679301 32.06 1 0.11667416494246408 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 54013 14478 KYLINLETL True NCI_RA007_Epitope_Rep4 1105.63831113629 1105.63720993586 63.041 2 0.11667380303216693 0.001828034210354508 0.9438714419765777 ['ENSG00000096968|ENST00000381652|JAK2'] 43513 22920 IIDDTIFNL True PC9_epitope_Rep3 1062.55972646242 1062.5586299358602 93.431 2 0.11667355193190256 0.001828034210354508 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 89127 13143 REFPTVPLV True NCI_RA007_Epitope_Rep4 1056.59678067748 1056.59568993586 57.652 2 0.11664752309905088 0.001828034210354508 0.9438714419765777 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 133209 6253 WEDDKVTEA True H1975_Epitope_Rep2 1091.4771190372699 1091.47657496793 29.006 1 0.11664544405440813 0.001828034210354508 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 6690 22268 AQAQEVFFL True PC9_epitope_Rep1 1051.53384606775 1051.53274993586 90.47 2 0.11664492502090269 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 115704 21404 TVLEQVLPI True PC9_epitope_Rep4 1010.6011973515798 1010.6006749679301 90.5 1 0.11664477286911397 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 2762 5718 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep3 863.3694835450299 863.36893496793 27.024 1 0.11661748151197404 0.001828034210354508 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 113303 15155 TQIDHYVGI True PC9_epitope_Rep5 1044.52400966004 1044.52347496793 63.3 1 0.1166051832240678 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 102827 20940 SQFPGAITL True PC9_epitope_Rep5 932.4967322830399 932.49618496793 85.603 1 0.11660030551891716 0.001828034210354508 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 137166 11948 YLDQM[Oxidation]EDLY True H1975_Epitope_Rep2 1204.4958062569601 1204.49470993586 51.036 2 0.11659955746775476 0.001828034210354508 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3'] 25465 5437 FENERAVTP True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 25.972 2 0.11659847458340322 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1'] 33828 13352 GLVDEKALAQA True PC9_epitope_Rep2 1113.60298825673 1113.60188993586 56.631 2 0.11659827288872646 0.001828034210354508 0.9438714419765777 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF', 'ENST00000511907.1_1_4:1208072-1210006:-|nuORF', 'ENSG00000175029|ENST00000309035|CTBP2', 'nc|ENSG00000175029|P56545|CTBP2', 'nc|ENSG00000175029|P56545-3|CTBP2', 'nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1'] 89581 4631 RESKVVVPP True NCI_RA007_Epitope_Rep2 1009.5920296502098 1009.59092993586 22.638 2 0.1165948121669805 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 1321 6517 AEEAARLSVAA True H1975_Epitope_Rep2 1086.56693710118 1086.5658499358601 29.981 2 0.11658766128938652 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 39395 14681 HLVPEVPTV True PC9_epitope_Rep6 989.55458151233 989.55348993586 68.4 2 0.11658551454868775 0.001828034210354508 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 6751 20616 AQEDYLFSV True PC9_epitope_Rep4 1070.49204082542 1070.49094993586 87.453 2 0.11657435932320048 0.001828034210354508 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 107283 20334 SYQKVIELF True PC9_epitope_Rep5 1125.6070110080097 1125.60647496793 83.25 1 0.1165580971966584 0.001828034210354508 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 64086 11427 LQEDPPAGV True PC9_epitope_Rep1 924.4552613938798 924.45416993586 48.832 2 0.11654998122245884 0.001828034210354508 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 130704 13756 VVDGNFEEV True PC9_epitope_Rep6 1006.46074069714 1006.4596499358599 64.71 2 0.1165476499332619 0.001828034210354508 0.9438714419765777 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 8266 4336 ATIQGAYAR True NCI_RA007_Epitope_Rep3 949.4981292653698 949.49702993586 23.804 2 0.1165445460889791 0.001828034210354508 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 13881 6741 DRDPASGTAL True PC9_epitope_Rep2 1001.47778774361 1001.47668993586 31.337 2 0.11653779773655365 0.001828034210354508 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 38465 9820 HGYGFDQAL True NCI_RA007_Epitope_Rep3 1006.4508447197799 1006.44974993586 45.701 2 0.11653701377477166 0.001828034210354508 0.9438714419765777 ['ENSG00000020129|ENST00000373243|NCDN', 'nc|ENSG00000020129|Q9UBB6-2|NCDN', 'NCDN|p.T251Dfs*6|1|0.16|ENSG00000020129|chr1:35560895-35560896|-/C|frameshift_variant'] 123395 14167 VIDGHIYAV True PC9_epitope_Rep5 985.52328138405 985.52218993586 59.504 2 0.11653579191277542 0.001828034210354508 0.9438714419765777 ['TYK2-KEAP1|1|fusion', 'KEAP1|p.V418L|1|0.32|ENSG00000079999|chr19:10491650-10491650|C/A|missense_variant', 'KEAP1|p.N469Kfs*11|1|0.54|ENSG00000079999|chr19:10489772-10489773|-/T|frameshift_variant', 'KEAP1|p.R596Efs*2|1|0.17|ENSG00000079999|chr19:10486741-10486741|G/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1'] 134889 14752 YADGESFLGY True H1975_Epitope_Rep3 1120.4713053808398 1120.4707749679299 62.121 1 0.11653182730226638 0.001828034210354508 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 107264 21252 SYPTFFPRF True PC9_epitope_Rep5 1160.5654805491997 1160.5643899358602 86.796 2 0.11652892480107162 0.001828034210354508 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'ENST00000481663.1_1_3:148801501-148804285:-|nuORF'] 14257 5184 DSYVGDEAQSK True PC9_epitope_Rep1 1197.51496109797 1197.5138699358602 24.792 2 0.1165223836616389 0.0018599490961300007 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 36406 16039 GVIDLIFEK True NCI_RA007_Epitope_Rep4 1032.58554728744 1032.5849749679298 69.565 1 0.11651975210046595 0.0018599490961300007 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'EIF4G1|p.L794R|1|0.17|ENSG00000114867|chr3:184323886-184323886|T/G|missense_variant'] 89216 6111 REINTILKA True NCI_RA007_Epitope_Rep3 1056.62914343492 1056.6280499358602 31.027 2 0.11651910821855924 0.0018599490961300007 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'nc|ENSG00000008128|Q9UQ88-9|CDK11A', 'ENST00000598846.1_1_1:1635046-1639660:-|nuORF', 'ENST00000474916.1_1_1:1636243-1639664:-|nuORF', 'ENST00000468800.5_1_1:1635923-1638967:-|nuORF', 'ENST00000492390.5_1_1:1636243-1639660:-|nuORF'] 70912 18910 [Acetylation]-M[Oxidation]ELITILEK True H1975_Epitope_Rep1 1146.62061316356 1146.6195099358602 78.852 2 0.11651067360675232 0.0018599490961300007 0.9438714419765777 ['ENSG00000108424|ENST00000290158|KPNB1'] 98057 18567 SHTSVPLLL True PC9_epitope_Rep1 965.55458151233 965.55348993586 76.205 2 0.11650849788820389 0.0018599490961300007 0.9438714419765777 ['ENSG00000136840|ENST00000335791|ST6GALNAC4', 'ENST00000495983.1_1_9:130672770-130677033:-|nuORF', 'nc|ENSG00000184005|Q8NDV1-2|ST6GALNAC3', 'ENSG00000184005|ENST00000328299|ST6GALNAC3'] 88665 7079 RAYADEVAV True NCI_RA007_Epitope_Rep4 992.4927095317598 992.49160993586 33.853 2 0.11650759351743001 0.0018599490961300007 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 103418 19813 SQYGEIVNI True PC9_epitope_Rep5 1021.5080252427299 1021.5074749679301 81.258 1 0.11649985720889199 0.0018599490961300007 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 624 17644 AASTLVTWL True H1975_Epitope_Rep2 960.52803241132 960.52748496793 73.186 1 0.1164954451349448 0.0018599490961300007 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 88398 18992 QYPVIIHLI True PC9_epitope_Rep6 1094.64881625034 1094.6477099358601 85.697 2 0.11648512972221714 0.0018599490961300007 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 57442 8817 LEIPPPKPP True H1975_Epitope_Rep1 986.5800679841799 986.57896993586 38.837 2 0.11647893021647995 0.0018599490961300007 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 104345 9338 SSEVTSQLY True H1975_Epitope_Rep2 1012.47130538084 1012.47020993586 40.879 2 0.11647473430129228 0.0018599490961300007 0.9438714419765777 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB'] 102700 16503 SQDPTMIGV True PC9_epitope_Rep5 946.44298245802 946.44188993586 68.477 2 0.11645876480363945 0.0018599490961300007 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 83482 16551 QDGQFSVLFTK True H1975_Epitope_Rep1 1268.6401020414398 1268.63900993586 69.038 2 0.1164411596471861 0.0018899279872266936 0.9438714419765777 ['CON__P12763'] 7921 13013 ATDDITELY True H1975_Epitope_Rep3 1039.47097102767 1039.47037496793 55.29 1 0.1164381913336762 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 135715 13107 YEIPSNLTP True H1975_Epitope_Rep3 1032.51277627 1032.51166993586 55.661 2 0.11643487099954662 0.0018899279872266936 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 83877 12921 QEIATVVVP True H1975_Epitope_Rep2 954.5385970950199 954.5380449679301 54.814 1 0.11643425530245514 0.0018899279872266936 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 8294 18036 ATLEKVIEI True PC9_epitope_Rep5 1014.5961119711399 1014.59500993586 74.391 2 0.11642910454878513 0.0018899279872266936 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 48476 5628 KEERPPELP True H1975_Epitope_Rep3 1093.5767735088898 1093.57566993586 26.685 2 0.11642772531764714 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 103302 6460 SQTSVAERL True PC9_epitope_Rep2 989.5141732523299 989.51306993586 30.262 2 0.11642746030236684 0.0018899279872266936 0.9438714419765777 ['ENSG00000171456|ENST00000375687|ASXL1'] 34667 22393 GQLDFSEFL True PC9_epitope_Rep4 1054.49712620586 1054.49657496793 94.368 1 0.1164238035617433 0.0018899279872266936 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 53535 16012 KVPEWVDTV True PC9_epitope_Rep4 1071.5600608155898 1071.5589699358602 69.523 2 0.11642340976153324 0.0018899279872266936 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 70233 20306 LYMDKFEEF True PC9_epitope_Rep5 1220.5423621461198 1220.54126993586 83.151 2 0.1164203091587197 0.0018899279872266936 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG', 'ENST00000445715.5_1_Y:21755293-21766003:+|nuORF'] 20563 20047 EQDQSVLVL True PC9_epitope_Rep2 1029.5342399905699 1029.5331499358601 82.517 2 0.11640209584881127 0.0018899279872266936 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 113996 19964 TRLPIDVQL True PC9_epitope_Rep3 1053.61824439805 1053.6171499358602 82.037 2 0.11640200747604565 0.0018899279872266936 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 96196 11541 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.45890993586 49.519 2 0.11640019283753207 0.0018899279872266936 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 96909 7211 SETKIFTA True NCI_RA007_Epitope_Rep1 895.4650978015899 895.46400993586 32.039 2 0.11639731408276638 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 11601 12184 DHADSNIVI True PC9_epitope_Rep5 982.47197408718 982.47086993586 51.855 2 0.11639539576195859 0.0018899279872266936 0.9438714419765777 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B'] 48817 5605 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 26.561 2 0.1163937638009765 0.0018899279872266936 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 17822 11772 EIAEAYLGK True PC9_epitope_Rep1 992.5178616504398 992.51676993586 50.154 2 0.1163904604195685 0.0018899279872266936 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 130456 16030 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 69.591 2 0.1163858150892984 0.0018899279872266936 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 125970 10207 VPAGGAVAV True PC9_epitope_Rep5 739.42283906679 739.42229496793 44.25 1 0.11638530350074225 0.0018899279872266936 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 97731 16083 SHFVSDVVI True PC9_epitope_Rep2 1001.5181960036099 1001.51708993586 67.12 2 0.11636819701870227 0.0018899279872266936 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 29799 10044 FVTFESPADAK True NCI_RA007_Epitope_Rep1 1210.5870038394198 1210.5859099358602 43.077 2 0.11636293197701722 0.0018899279872266936 0.9438714419765777 ['RBMXL2|p.G376Efs*4|1|0.33|ENSG00000170748|chr11:7090246-7090246|G/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2', 'ENSG00000175718|ENST00000424776|RBMXL3', 'ENSG00000147274|ENST00000320676|RBMX', 'ENSG00000213516|ENST00000652648|RBMXL1', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'nc|ENSG00000147274|P38159-3|RBMX'] 6600 18739 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 77.457 2 0.11635348675253268 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 26699 14642 FLDDSTALY True H1975_Epitope_Rep3 1043.48114178855 1043.48057496793 61.687 1 0.11635140149929064 0.0018899279872266936 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2'] 95265 11148 SADPNVVDL True H1975_Epitope_Rep3 928.45017601344 928.44962496793 47.976 1 0.11634914687793742 0.0018899279872266936 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 123124 18380 VHDEGVWAL True PC9_epitope_Rep5 1024.4977949121999 1024.49727496793 75.717 1 0.11634783231301236 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 103107 15794 SQLPPLREI True PC9_epitope_Rep5 1051.60259433391 1051.6014899358602 65.739 2 0.11634347142534823 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 87075 14410 QSEIASMLY True H1975_Epitope_Rep2 1040.48484727 1040.48374993586 60.58 2 0.11633764778322912 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 27513 19423 FPFAPPAAA True PC9_epitope_Rep4 887.4541391950698 887.45359496793 82.823 1 0.11633202148264356 0.0018899279872266936 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 6909 11965 AQLAHIQAL True PC9_epitope_Rep4 963.55016483823 963.54906993586 53.817 2 0.11633145945368681 0.0018899279872266936 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 74150 14784 NHYNNIMAL True PC9_epitope_Rep2 1088.50731405008 1088.5062099358602 62.13 2 0.11632927472993349 0.0018899279872266936 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 9625 11193 AYGFVARI True NCI_RA007_Epitope_Rep4 895.4915873329498 895.49048993586 49.94 2 0.11632562825990299 0.0018899279872266936 0.9438714419765777 ['ENSG00000110799|ENST00000261405|VWF', 'ENST00000321023.5_1_12:6204574-6232125:-|nuORF', 'nc|ENSG00000110799|P04275-2|VWF'] 109593 13061 THDEAINVL True PC9_epitope_Rep1 1010.5032742154599 1010.50216993586 55.107 2 0.11632297731942888 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 117168 23190 TYTDLLSVI True PC9_epitope_Rep1 1023.54882742555 1023.54772993586 93.995 2 0.11632126896216896 0.0018899279872266936 0.9438714419765777 ['ENST00000526447.1_1_11:67274830-67275269:-|nuORF', 'ENSG00000167797|ENST00000301488|CDK2AP2', 'ENST00000525402.5_1_11:67274418-67275269:-|nuORF'] 96971 7619 SEVGDTQVV True H1975_Epitope_Rep2 932.4450906330001 932.44398993586 34.259 2 0.11631422604120609 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000475205.1_1_21:30434643-30435788:-|nuORF'] 91549 18922 RPAGALVALVV True PC9_epitope_Rep4 1064.67061432408 1064.66950993586 80.87 2 0.1163127122027839 0.0018899279872266936 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 127060 16884 VPYPPLLRA True PC9_epitope_Rep4 1024.6069514383598 1024.60584993586 72.929 2 0.11630943466580865 0.0018899279872266936 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 115869 4739 TVNTSLVGK True NCI_RA007_Epitope_Rep5 917.5181960036099 917.51708993586 24.912 2 0.1163007563899102 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000180376|A2RUB6-3|CCDC66', 'ENSG00000180376|ENST00000394672|CCDC66', 'ENST00000422788.5_1_3:56595403-56599181:+|nuORF', 'ENST00000469966.1_1_3:56592935-56598176:+|nuORF', 'ENST00000472582.5_1_3:56591255-56599181:+|nuORF', 'nc|ENSG00000180376|A2RUB6-4|CCDC66', 'nc|ENSG00000180376|A2RUB6-2|CCDC66'] 74282 6898 NIILEEGK True H1975_Epitope_Rep3 914.5072969667399 914.50618993586 31.492 2 0.11629790727244008 0.0018899279872266936 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 119796 4891 VEVEGTVKA True H1975_Epitope_Rep3 930.5022115862998 930.50110993586 23.941 2 0.11629555451635483 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 87078 14220 QSEIASMLY True H1975_Epitope_Rep3 1040.48484727 1040.48374993586 60.037 2 0.11629332291152412 0.0018899279872266936 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 96227 4650 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 22.984 1 0.11628629686319515 0.0018899279872266936 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 126514 17833 VPNLQTVSV True PC9_epitope_Rep2 955.53384606775 955.53274993586 73.893 2 0.11628510236490024 0.0018899279872266936 0.9438714419765777 ['ENSG00000105866|ENST00000222584|SP4'] 72285 2765 MSEDKPQDY True H1975_Epitope_Rep2 1111.44919003727 1111.44808993586 14.665 2 0.11628071576616582 0.0018899279872266936 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 98547 19183 SILSEVQQA True PC9_epitope_Rep1 973.50802524273 973.50692993586 78.582 2 0.1162731080602052 0.0019148383746592237 0.9438714419765777 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 47883 8936 IYTSSVNRL True PC9_epitope_Rep4 1051.56620882519 1051.5651099358602 41.914 2 0.11626789472637335 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 49418 15858 KILPTLEAV True PC9_epitope_Rep6 982.60628273202 982.60518993586 73.27 2 0.11626579327767003 0.0019148383746592237 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 135804 4985 YENPHYQSP True H1975_Epitope_Rep3 1133.47778774361 1133.4766899358601 24.304 2 0.1162638806124001 0.0019148383746592237 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 89392 13799 REMIPFAVV True NCI_RA007_Epitope_Rep3 1060.57393705792 1060.57282993586 61.604 2 0.11626205570257657 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'ENST00000586456.1_1_17:75486911-75493449:+|nuORF'] 61202 16082 LLDPASFEY True H1975_Epitope_Rep1 1053.50187723313 1053.50137496793 67.201 1 0.11625468019951837 0.0019148383746592237 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 119843 6377 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51676993586 29.511 2 0.11625360092117457 0.0019148383746592237 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 103393 15431 SQWDSPMRV True PC9_epitope_Rep3 1104.5022286696399 1104.50112993586 64.509 2 0.11625159200166088 0.0019148383746592237 0.9438714419765777 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 24006 14756 EYPDRIM[Oxidation]NTF True PC9_epitope_Rep5 1300.57578791316 1300.57468993586 61.758 2 0.11625078747162151 0.0019148383746592237 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 96289 7755 SEETPAISP True H1975_Epitope_Rep1 929.4341915961298 929.43364496793 34.789 1 0.11624813892377156 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 67 12907 AAAGSPVFL True H1975_Epitope_Rep3 831.44905381463 831.44850496793 54.874 1 0.11624628606942457 0.0019148383746592237 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 69945 22493 LYEEAFTVF True PC9_epitope_Rep2 1117.53317736141 1117.53208993586 92.009 2 0.11623948936504702 0.0019148383746592237 0.9438714419765777 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 16085 8707 EEDIRDLAA True H1975_Epitope_Rep2 1030.4931034545798 1030.49200993586 38.452 2 0.11623290310757627 0.0019148383746592237 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 103154 20677 SQNDGFFAV True PC9_epitope_Rep3 983.4348603024699 983.43376993586 84.808 2 0.11622920769177908 0.0019148383746592237 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 135500 5296 YEDM[Oxidation]AAFM[Oxidation]K True H1975_Epitope_Rep3 1136.4518336504398 1136.4507299358602 25.45 2 0.11622247608116774 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 96566 11800 SELPTTVTV True H1975_Epitope_Rep2 945.50187723313 945.50132496793 50.465 1 0.11622070207792383 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 84921 11371 QHTPTSITL True PC9_epitope_Rep1 996.52400966004 996.52290993586 48.62 2 0.11621342221795646 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'SETD5|p.K832Rfs*8|1|0.2|ENSG00000168137|chr3:9464441-9464441|A/-|frameshift_variant', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF'] 45173 16618 IRDPFIHEI True PC9_epitope_Rep5 1138.6134933707801 1138.6118549037901 68.926 3 0.11621240980935717 0.0019148383746592237 0.9438714419765777 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 34489 16280 GQDGSVVQF True PC9_epitope_Rep5 935.4348603024699 935.43376993586 67.614 2 0.11620384909192524 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2', 'ENSG00000177688|ENST00000326669|SUMO4', 'ENSG00000184900|ENST00000332859|SUMO3', 'nc|ENSG00000184900|P55854-2|SUMO3', 'ENST00000466861.1_1_21:46233737-46238015:-|nuORF', 'ENST00000511179.1_1_17:48313271-48313352:+|nuORF'] 40169 13080 HRFGGLVL True PC9_epitope_Rep4 897.5184707871299 897.51736993586 58.204 2 0.11620314419237425 0.0019148383746592237 0.9438714419765777 ['ENSG00000007520|ENST00000007390|TSR3'] 127371 13672 VQPSLFYHL True NCI_RA007_Epitope_Rep5 1102.58113061334 1102.58002993586 59.273 2 0.11620263716098456 0.0019148383746592237 0.9438714419765777 ['MAP3K6|p.D642*|1|0.14|ENSG00000142733|chr1:27360835-27360836|-/A|frameshift_variant', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'ENSG00000142733|ENST00000357582|MAP3K6'] 71793 15501 [Acetylation]-M[Oxidation]NPEYDYLFK True H1975_Epitope_Rep3 1376.5958549677 1376.5947499358601 65.04 2 0.1161910368862124 0.0019148383746592237 0.9438714419765777 ['ENSG00000174903|ENST00000311481|RAB1B', 'ENST00000494188.1_1_2:65298326-65357199:-|nuORF', 'nc|ENSG00000138069|P62820-3|RAB1A', 'nc|ENSG00000138069|P62820-2|RAB1A', 'ENSG00000138069|ENST00000409784|RAB1A'] 70741 17289 MEALPLLAA True H1975_Epitope_Rep2 927.5099398190299 927.50939496793 71.795 1 0.11617753126386983 0.0019148383746592237 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 130429 17015 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 70.272 2 0.11616823180776795 0.0019148383746592237 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 44524 12449 IPAGTVTVNAA True PC9_epitope_Rep5 1012.55530978832 1012.55420993586 52.886 2 0.11616719912931879 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 104962 20592 STIAILNSV True PC9_epitope_Rep2 916.5229470308801 916.52239496793 84.638 1 0.11616108540201633 0.0019148383746592237 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 2205 5813 AENPKLISA True H1975_Epitope_Rep3 941.5181960036099 941.51708993586 27.382 2 0.11615775887581005 0.0019148383746592237 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 105807 23496 SVINFLDQL True PC9_epitope_Rep1 1047.5600608155898 1047.5589699358602 95.164 2 0.1161381194885774 0.0019148383746592237 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 38078 3066 HENESVYKA True H1975_Epitope_Rep1 1075.4934378077498 1075.4923499358601 15.602 2 0.11613714977449163 0.0019148383746592237 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000578492.5_1_17:62746826-62750158:-|nuORF'] 135133 19786 YAQGLLTGV True PC9_epitope_Rep3 920.4967322830399 920.49562993586 81.337 2 0.11613567654381927 0.0019148383746592237 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 88951 5204 REDGPGIPA True H1975_Epitope_Rep2 910.4508447197799 910.44974993586 25.089 2 0.11613483822875667 0.0019148383746592237 0.9438714419765777 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF', 'ENST00000568642.5_1_16:46706372-46712929:-|nuORF'] 96571 10524 SELPVSEVA True H1975_Epitope_Rep2 929.47057710485 929.46948993586 45.502 2 0.11613005767586586 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 97595 17028 SHADVVNLL True PC9_epitope_Rep1 966.51344497634 966.51234993586 70.322 2 0.11612585879527483 0.0019148383746592237 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 140900 20383 YYVGGEIVTI True PC9_epitope_Rep4 1112.57537652656 1112.57426993586 86.548 2 0.11611607171088134 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 21563 17856 ERSDTFINL True PC9_epitope_Rep5 1093.54038800017 1093.53928993586 73.701 2 0.11611513856330175 0.0019148383746592237 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 116732 10453 TYLDKVENI True NCI_RA007_Epitope_Rep3 1093.56554011885 1093.56444993586 48.18 2 0.11610904343902742 0.0019148383746592237 0.9438714419765777 ['ENSG00000185745|ENST00000371804|IFIT1', 'nc|ENSG00000185745|P09914-2|IFIT1'] 71064 6072 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 28.333 1 0.11610606723055734 0.0019148383746592237 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 88309 20999 QYLDVLHAL True PC9_epitope_Rep3 1070.5760452329 1070.57494993586 86.049 2 0.11610207764451333 0.0019148383746592237 0.9438714419765777 ['ENST00000607532.5_1_6:13307806-13327130:-|nuORF', 'nc|ENSG00000145979|Q9P0N9-4|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-2|TBC1D7', 'ENSG00000145979|ENST00000379300|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-3|TBC1D7'] 10050 19760 AYVGDLQTL True PC9_epitope_Rep5 978.5022115863 978.50110993586 81.05 2 0.1161008329882764 0.0019148383746592237 0.9438714419765777 ['ENSG00000065802|ENST00000264607|ASB1'] 1845 10913 AEIEELTASA True H1975_Epitope_Rep2 1032.4975201286798 1032.49642993586 47.007 2 0.11609965272050547 0.0019148383746592237 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B'] 1707 5474 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41284496793 26.109 1 0.11608784916044547 0.0019148383746592237 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 75035 13528 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 57.172 2 0.11608511425138668 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 34526 5475 GQEDHYNNL True PC9_epitope_Rep4 1088.45230127176 1088.45120993586 27.808 2 0.11608257835107694 0.0019148383746592237 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 57126 11217 LEEPLTQVA True H1975_Epitope_Rep1 998.52842633414 998.5278749679301 48.117 1 0.11606680937221045 0.0019148383746592237 0.9438714419765777 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'ENST00000368302.3_1_1:156027838-156028159:+|nuORF', 'nc|ENSG00000116586|Q9Y2Q5-3|LAMTOR2'] 96229 4835 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 23.687 1 0.11606487993435052 0.0019148383746592237 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 91568 18411 RPALPVSYLQA True PC9_epitope_Rep5 1213.68190728377 1213.68080993586 75.838 2 0.11605977447525412 0.0019148383746592237 0.9438714419765777 ['ENSG00000167615|ENST00000326764|LENG8'] 35268 4719 GSMGSFSEK True NCI_RA007_Epitope_Rep4 928.3960322656001 928.39492993586 24.582 2 0.11605829831288794 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 14883 20254 DYIKFLRSI True PC9_epitope_Rep2 1153.64954452633 1153.64788490379 83.328 3 0.11605386340763656 0.0019148383746592237 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 11961 15641 DHTAPLLL True PC9_epitope_Rep6 878.48616759934 878.48506993586 72.368 2 0.11605094751999762 0.0019148383746592237 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 22965 15438 EVIEKFDYV True PC9_epitope_Rep6 1140.5702911461199 1140.56918993586 71.536 2 0.11604482125644094 0.0019148383746592237 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 139424 13535 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep3 1147.5107280451098 1147.5096299358602 57.342 2 0.11604379613913403 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 86532 6813 QRAPGQQVL True PC9_epitope_Rep5 995.5512274673898 995.55012993586 31.177 2 0.11604086716997813 0.0019148383746592237 0.9438714419765777 ['ENSG00000140987|ENST00000396852|ZSCAN32'] 22206 6443 ETDEQRLRDEY True H1975_Epitope_Rep3 1452.6481005258397 1452.64645490379 29.759 3 0.11604057865980016 0.0019148383746592237 0.9438714419765777 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2'] 98041 15262 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep3 1277.7343370957499 1277.7332299358602 63.855 2 0.11603732704149786 0.0019148383746592237 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 12652 9556 DLEIATYR True NCI_RA007_Epitope_Rep2 979.4974605590301 979.49636993586 41.784 2 0.11603623668303241 0.0019148383746592237 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 67262 12678 LTDLYSPEY True H1975_Epitope_Rep3 1099.50735653639 1099.50677496793 53.977 1 0.11603518355131934 0.0019148383746592237 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF'] 13852 19966 DRAIPLVL True PC9_epitope_Rep1 895.5491022090699 895.54800993586 81.624 2 0.11602557660553267 0.0019148383746592237 0.9438714419765777 ['ENSG00000103381|ENST00000381774|CPPED1'] 7470 7827 ASDPYQVHV True H1975_Epitope_Rep2 1014.4770594676198 1014.47596993586 35.056 2 0.1160235800372335 0.0019148383746592237 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 17446 14914 EHGDQDYIW True PC9_epitope_Rep4 1161.47270236317 1161.4716099358602 65.308 2 0.1160179287691849 0.0019148383746592237 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000550040.1_1_12:50153009-50155568:+|nuORF'] 136635 19300 YIDIDPLLY True H1975_Epitope_Rep1 1123.58012755383 1123.5795749679298 80.407 1 0.11601066474992393 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 28 4129 AAAAPLGAR True NCI_RA007_Epitope_Rep4 796.4555361774 796.45442993586 22.169 2 0.11599551651274395 0.0019148383746592237 0.9438714419765777 ['ENST00000426838.8_1_18:42260239-42281192:+|nuORF'] 8346 15634 ATLSKIIQV True PC9_epitope_Rep2 971.6015317047498 971.60042993586 65.413 2 0.11599379339033171 0.0019148383746592237 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 2510 5964 AEQQTVAAV True H1975_Epitope_Rep2 915.4661604307498 915.46506993586 27.922 2 0.11598916122615512 0.0019148383746592237 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 128370 13625 VSDPVGVLY True H1975_Epitope_Rep2 947.49639792987 947.4958449679301 57.547 1 0.11598852308782759 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 6808 18924 AQGGVLPNI True PC9_epitope_Rep1 867.48141657207 867.48030993586 77.575 2 0.11598647467951072 0.0019148383746592237 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC8|p.A114T|1|0.22|ENSG00000277075|chr6:26217314-26217314|G/A|missense_variant', 'H2AC4|p.Q113K|1|0.39|ENSG00000278463|chr6:26033232-26033232|G/T|missense_variant', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 2477 8786 AEQPSELVSA True H1975_Epitope_Rep3 1029.4978544818498 1029.49727496793 38.801 1 0.11598060303249194 0.0019148383746592237 0.9438714419765777 ['ENSG00000183155|ENST00000367262|RABIF'] 107759 15936 TAMDVVYAL True NCI_RA007_Epitope_Rep4 981.4841189940099 981.48302993586 69.166 2 0.11597961103987388 0.0019148383746592237 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 133258 6703 WEEPSSGNGTA True H1975_Epitope_Rep2 1133.46253160229 1133.46142993586 30.694 2 0.11597562919768394 0.0019148383746592237 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 119624 8021 VESAYEVIK True NCI_RA007_Epitope_Rep2 1036.5440763982797 1036.5429699358601 35.831 2 0.11597049420409365 0.0019148383746592237 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 37313 12862 GVVPTIQKV True PC9_epitope_Rep5 939.5753169569098 939.57420993586 54.482 2 0.11596454513815091 0.0019148383746592237 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 8412 7047 ATQQILDEAER True H1975_Epitope_Rep1 1272.6309939097198 1272.62988993586 32.14 2 0.11595525056519172 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2'] 4287 5631 AIITPPPAK True NCI_RA007_Epitope_Rep3 906.5538532363399 906.55274993586 29.14 2 0.1159485291990824 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 6761 10801 AQEPGNYEV True PC9_epitope_Rep1 1005.4403396057298 1005.43924993586 46.433 2 0.11594445807503614 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 57939 11391 LEQNIQLPA True H1975_Epitope_Rep3 1024.5553097883198 1024.5542099358602 48.929 2 0.11594444917799414 0.0019148383746592237 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 96190 11863 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 50.709 1 0.11593732276495056 0.0019148383746592237 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 135803 4884 YENPHYQSP True H1975_Epitope_Rep3 1133.47778774361 1133.4766899358601 23.912 2 0.11593414272701043 0.0019148383746592237 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 139951 19167 YVIEDDVNM True PC9_epitope_Rep5 1096.47467650912 1096.47417496793 78.764 1 0.115932913544043 0.0019148383746592237 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 9850 20985 AYLPKILQI True PC9_epitope_Rep3 1057.65356727761 1057.6524699358602 85.995 2 0.1159297026576781 0.0019148383746592237 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 136313 9886 YGYHDFGSS True PC9_epitope_Rep2 1031.3984747937498 1031.39736993586 43.36 2 0.11592881413053949 0.0019148383746592237 0.9438714419765777 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'ENST00000592763.5_1_19:10795072-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 63261 18126 LPALAGVSA True PC9_epitope_Rep5 797.46470387877 797.4641549679301 74.731 1 0.11592595180538759 0.0019148383746592237 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 96548 11709 SELPGAFEA True NCI_RA007_Epitope_Rep3 919.4287122928699 919.42760993586 53.17 2 0.11591315151787591 0.0019148383746592237 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 28469 11644 FSEQVAMGY True H1975_Epitope_Rep3 1030.4429824580197 1030.44247496793 49.923 1 0.11591044311477025 0.0019148383746592237 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 119514 9390 VEQQSVFTA True H1975_Epitope_Rep2 1007.4923751785898 1007.49126993586 41.082 2 0.11590580305336359 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000155755|Q96Q45-4|TMEM237', 'nc|ENSG00000155755|Q96Q45-2|TMEM237', 'ENSG00000155755|ENST00000409883|TMEM237', 'nc|ENSG00000155755|Q96Q45-5|TMEM237', 'nc|ENSG00000155755|Q96Q45-3|TMEM237', 'TMEM237|p.T158S|1|0.14|ENSG00000155755|chr2:201632132-201632132|T/A|missense_variant'] 46199 7554 ITDIVNKY True H1975_Epitope_Rep3 964.52294703088 964.52184993586 34.038 2 0.115903163113826 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'ENST00000490114.1_1_20:37202892-37204542:+|nuORF'] 103280 14768 SQTLVSQGL True PC9_epitope_Rep1 931.4974605590301 931.49636993586 61.624 2 0.11589358519968192 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 53852 19749 KYGPVFSF True PC9_epitope_Rep3 943.4803539429099 943.47924993586 81.192 2 0.11589315769378444 0.0019148383746592237 0.9438714419765777 ['ENSG00000001630|ENST00000003100|CYP51A1'] 70397 22745 LYQFNPAFF True PC9_epitope_Rep2 1145.5545815123298 1145.5540749679299 92.983 1 0.11588551233025174 0.0019148383746592237 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 48050 19949 KALQFLEEV True PC9_epitope_Rep5 1075.5913609438699 1075.59026993586 81.786 2 0.1158849533394647 0.0019148383746592237 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 4408 13332 AIVDKVPSV True PC9_epitope_Rep1 926.54368247546 926.54258993586 56.14 2 0.11588474718776991 0.0019148383746592237 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 95164 18265 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41156993586 75.046 2 0.11588016648756344 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 109825 19594 THLESLVEL True PC9_epitope_Rep3 1039.5549754351498 1039.5538699358601 80.605 2 0.11587570604341438 0.0019148383746592237 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4'] 57697 9259 LENEIQTY True NCI_RA007_Epitope_Rep5 1008.4763907612798 1008.47528993586 42.263 2 0.11587216687690369 0.0019148383746592237 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 137232 13963 YLETVAAYY True H1975_Epitope_Rep2 1091.51752729727 1091.5169749679299 58.856 1 0.11586010195031028 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 28535 9469 FSHYMEENL True NCI_RA007_Epitope_Rep5 1168.4859098991599 1168.48480993586 43.057 2 0.11585901929204703 0.0019148383746592237 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 84868 10771 QHQSGIVQL True PC9_epitope_Rep3 1008.5352430500798 1008.53414993586 46.387 2 0.11584746580016238 0.0019148383746592237 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 20969 20718 ERADLIAYL True PC9_epitope_Rep1 1062.57095985246 1062.5698699358602 84.516 2 0.11584720709074009 0.0019148383746592237 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 102993 18422 SQISDTSVVL True PC9_epitope_Rep3 1047.5448046742702 1047.54370993586 76.065 2 0.1158450803018732 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 132986 18125 VYVEKISFL True PC9_epitope_Rep6 1096.6168474157198 1096.61574993586 82.354 2 0.11583230379041032 0.0019148383746592237 0.9438714419765777 ['ENSG00000171017|ENST00000306708|LRRC8E'] 103872 18584 SRLDSVLLL True PC9_epitope_Rep6 1014.6073453611799 1014.60624993586 84.125 2 0.11583189789138097 0.0019148383746592237 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 8059 12257 ATDYTFAM[Oxidation]Y True H1975_Epitope_Rep3 1097.43756310485 1097.43697496793 52.324 1 0.11582686328390299 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'FOXP4-CCND3|5|fusion', 'FOXP4-CCND3|1|fusion', 'FOXP4-CCND3|3|fusion', 'FOXP4-CCND3|2|fusion', 'FOXP4-CCND3|4|fusion', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 140660 21580 YYPNPPLVL True PC9_epitope_Rep5 1074.57498260374 1074.57447496793 88.048 1 0.11582209913214628 0.0019148383746592237 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 102871 14405 SQHGVIIQL True PC9_epitope_Rep4 993.5607295219299 993.56018496793 63.318 1 0.11580670360121587 0.0019148383746592237 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 11505 5256 DGGAWGTEQR True NCI_RA007_Epitope_Rep5 1075.46828568907 1075.46718993586 26.913 2 0.11580250930020682 0.0019148383746592237 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 40798 21446 HVIDLDDATFL True PC9_epitope_Rep1 1257.62411762413 1257.6230299358601 87.33 2 0.11579963073291637 0.0019148383746592237 0.9438714419765777 ['ENSG00000152219|ENST00000282032|ARL14EP'] 35552 14884 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.51670993586 62.516 2 0.11579796817218849 0.0019148383746592237 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 120851 14802 VGDPSVHLL True PC9_epitope_Rep2 935.5076313199099 935.50652993586 62.201 2 0.11579606710292827 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 27921 9265 FQNALLVR True NCI_RA007_Epitope_Rep4 959.5552502186699 959.55414993586 42.49 2 0.11579374830843761 0.0019148383746592237 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 75110 11492 NMTSVTNHF True PC9_epitope_Rep5 1049.46002950449 1049.4589299358602 49.2 2 0.11579288969205027 0.0019148383746592237 0.9438714419765777 ['ENSG00000070950|ENST00000264926|RAD18', 'RAD18|p.D408Tfs*40|2|0.17|ENSG00000070950|chr3:8898994-8898994|C/-|frameshift_variant'] 116814 18517 TYLSIIHSL True PC9_epitope_Rep6 1045.58079626017 1045.5796899358602 83.867 2 0.1157905089929056 0.0019148383746592237 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 1618 6996 AEFVEVTK True NCI_RA007_Epitope_Rep1 921.4807478657299 921.47964993586 31.211 2 0.11577693685720042 0.0019148383746592237 0.9438714419765777 ['CON__P02769'] 106989 18938 SYLERHGLINF True PC9_epitope_Rep5 1347.6935345966297 1347.69187490379 77.868 3 0.11577404711495821 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 106818 13216 SYHPALNAI True PC9_epitope_Rep1 984.5028802926399 984.50178993586 55.699 2 0.11577290435840148 0.0019148383746592237 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.C777*|1|0.3|ENSG00000115760|chr2:32415620-32415621|TG/-|frameshift_variant', 'BIRC6-YIPF4|1|fusion'] 32587 7552 GHATPVSSL True PC9_epitope_Rep5 867.4450310633501 867.44392993586 33.999 2 0.11577265716104941 0.0019148383746592237 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 20973 19609 ERADLIAYL True PC9_epitope_Rep4 1062.57095985246 1062.5703749679299 83.55 1 0.11577041967462842 0.0019148383746592237 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 136637 19187 YIDIDPLLY True H1975_Epitope_Rep3 1123.58012755383 1123.5795749679298 80.456 1 0.11576845889126934 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 61200 14982 LLDPAQTGFY True H1975_Epitope_Rep2 1123.55497543515 1123.5538699358601 62.779 2 0.11576805744716659 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000162714|Q96IT1-2|ZNF496', 'ENSG00000162714|ENST00000682384|ZNF496', 'ENST00000462139.1_1_1:247473617-247473770:-|nuORF'] 130879 4633 VVGVGMTK True NCI_RA007_Epitope_Rep5 789.44186025921 789.44076993586 24.499 2 0.11576289778528737 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 140445 20165 YYFPVKNVI True PC9_epitope_Rep1 1141.6171817688898 1141.6160899358601 82.394 2 0.11573790048332554 0.0019148383746592237 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 36836 12328 GVPSTAIREI True PC9_epitope_Rep2 1041.5818588893299 1041.5807699358602 52.732 2 0.11573215574140573 0.0019148383746592237 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF', 'ENST00000567351.5_2_17:73997368-73998786:+|nuORF', 'ENSG00000123374|ENST00000266970|CDK2', 'ENSG00000250506|ENST00000448471|CDK3', 'nc|ENSG00000123374|P24941-2|CDK2'] 107776 19485 TAM[Oxidation]DVVYAL True PC9_epitope_Rep2 997.4790339940099 997.47792993586 80.331 2 0.115719879921031 0.0019148383746592237 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 26826 20837 FLEKLLPPV True PC9_epitope_Rep2 1054.6426682407398 1054.6415699358602 85.595 2 0.11571896530842317 0.0019148383746592237 0.9438714419765777 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 118109 20839 VATWVDETL True PC9_epitope_Rep5 1032.51277627 1032.51166993586 85.207 2 0.11571429529978602 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 96569 10279 SELPVSEVA True H1975_Epitope_Rep1 929.47057710485 929.47002496793 44.483 1 0.11571108108820574 0.0019148383746592237 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 24037 10456 EYQDLLNVK True NCI_RA007_Epitope_Rep5 1120.5764391557198 1120.57534993586 46.85 2 0.11570297992254477 0.0019460300985988583 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 57876 14787 LEQEYGEPFLA True H1975_Epitope_Rep2 1294.60813320682 1294.60702993586 62.037 2 0.11570232366533195 0.0019460300985988583 0.9438714419765777 ['ENSG00000092330|ENST00000267415|TINF2', 'nc|ENSG00000092330|Q9BSI4-2|TINF2', 'ENST00000559147.1_1_14:24710388-24711538:-|nuORF'] 11773 16901 DHIHIIAL True PC9_epitope_Rep5 930.52870111766 930.52760993586 70.024 2 0.11569895861126034 0.0019460300985988583 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 75427 17042 NQFQGKWYV True PC9_epitope_Rep5 1168.5665431783598 1168.5654499358602 70.57 2 0.11568976590167944 0.0019460300985988583 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant'] 106963 19387 SYLDSVHFF True PC9_epitope_Rep6 1113.51311062317 1113.51200993586 87.223 2 0.11568265941110015 0.0019460300985988583 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 96573 10453 SELPVSEVA True H1975_Epitope_Rep3 929.47057710485 929.46948993586 45.268 2 0.11568073599865558 0.0019460300985988583 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 100177 21010 SLLGDDALVQV True PC9_epitope_Rep4 1128.60265390356 1128.60154993586 88.976 2 0.11568055804871688 0.0019460300985988583 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 106509 12863 SVVPDVRSV True PC9_epitope_Rep5 956.52909504048 956.52798993586 54.486 2 0.11567285089368795 0.0019460300985988583 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 53846 6413 KYGPIRQI True PC9_epitope_Rep4 973.5709002828098 973.56980993586 31.762 2 0.11566400017400642 0.0019460300985988583 0.9438714419765777 ['ENST00000478050.1_1_2:24296944-24299099:-|nuORF', 'ENSG00000115128|ENST00000233468|SF3B6'] 96549 11852 SELPGAFEA True NCI_RA007_Epitope_Rep4 919.4287122928699 919.42816496793 52.569 1 0.11566194411569704 0.0019460300985988583 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 74537 19722 NLAEKLIGV True PC9_epitope_Rep3 955.5702315764698 955.56912993586 81.088 2 0.11565875839250686 0.0019460300985988583 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 107749 12954 TALVELVK True PC9_epitope_Rep4 871.5378688190299 871.53676993586 57.717 2 0.11565056990960296 0.0019460300985988583 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 1593 12384 AEFLPDPSA True H1975_Epitope_Rep2 945.4443623570099 945.44381496793 52.723 1 0.1156480866917349 0.0019460300985988583 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 72090 18544 MRDPIRILV True PC9_epitope_Rep1 1111.65358436095 1111.65248993586 76.119 2 0.11564667664733459 0.0019460300985988583 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 100428 10987 SLPDLTTPLK True NCI_RA007_Epitope_Rep3 1083.61757569171 1083.61646993586 50.305 2 0.11564201923874501 0.0019460300985988583 0.9438714419765777 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 5179 23154 ALPEIFTEL True PC9_epitope_Rep5 1031.55391280599 1031.55337496793 94.05 1 0.11563640376201006 0.0019460300985988583 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 31716 15405 GEIQSFPLP True H1975_Epitope_Rep2 986.5072969667399 986.50618993586 64.414 2 0.11563440642257106 0.0019460300985988583 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 93829 6888 RVEEAIHPV True PC9_epitope_Rep5 1048.56654317836 1048.5654499358602 31.464 2 0.11563305807760127 0.0019460300985988583 0.9438714419765777 ['ENST00000367590.8_1_1:180601192-180601402:+|nuORF'] 83700 5313 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 25.488 2 0.11563028229195822 0.0019460300985988583 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 96552 12051 SELPGAFEA True NCI_RA007_Epitope_Rep5 919.4287122928699 919.42816496793 53.012 1 0.1156228044055972 0.0019460300985988583 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 106793 20737 SYGDILHVI True PC9_epitope_Rep5 1015.53384606775 1015.5332749679301 84.823 1 0.11561804034676772 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 25212 9060 FEADPPGQVAA True H1975_Epitope_Rep3 1100.51383889916 1100.5132749679299 39.834 1 0.11561801735523004 0.001963498245726977 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 113377 18307 TQLGPPYHIL True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 75.745 2 0.1156118464931165 0.001963498245726977 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 17685 16232 EHSLGVLAV True PC9_epitope_Rep5 923.5076313199099 923.50652993586 67.425 2 0.1156115989307461 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENSG00000141030|ENST00000268717|COPS3', 'ENST00000462236.1_1_17:17171268-17179473:-|nuORF', 'COPS3|p.I141Nfs*4|1|0.21|ENSG00000141030|chr17:17267904-17267905|-/T|frameshift_variant'] 94556 10331 RYIPTAAAF True NCI_RA007_Epitope_Rep4 1008.5392658013599 1008.53816993586 46.596 2 0.11560833553623115 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 96303 7702 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43308993586 34.608 2 0.11560206356162513 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 29627 22829 FVLPELPSV True PC9_epitope_Rep5 999.56408356687 999.5635749679301 92.807 1 0.1155939263657801 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 46718 10244 IVAEEFLK True H1975_Epitope_Rep1 947.5327834385898 947.53168993586 44.347 2 0.11558207678424098 0.001963498245726977 0.9438714419765777 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'ENST00000440787.5_1_3:9845376-9847896:+|nuORF', 'nc|ENSG00000241553|P59998-4|ARPC4'] 275 12814 AAGSPVFL True H1975_Epitope_Rep3 760.41194002992 760.41139496793 54.508 1 0.11557940712474142 0.001963498245726977 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 34465 12135 GQDEPLIHV True PC9_epitope_Rep6 1006.5083595958998 1006.50726993586 58.027 2 0.11557797670341424 0.001963498245726977 0.9438714419765777 ['ENSG00000157778|ENST00000288607|PSMG3'] 4267 21044 AIIPVSGITVV True PC9_epitope_Rep4 1067.65904658087 1067.6579499358602 89.104 2 0.1155760348399575 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 96535 11834 SELPGAFEA True H1975_Epitope_Rep1 919.4287122928699 919.42816496793 50.517 1 0.1155711454168644 0.001963498245726977 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 73905 8201 NHHMQSISF True PC9_epitope_Rep4 1099.4869129586702 1099.48580993586 39.003 2 0.1155696967184413 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 8903 19820 AVGGLGSIIRV True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 81.47 2 0.11556899529197429 0.001963498245726977 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 102933 21045 SQIISLQTL True PC9_epitope_Rep3 1001.5757108797301 1001.5746099358599 86.229 2 0.1155686760351863 0.001963498245726977 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 102857 10123 SQHGVIIQL True NCI_RA007_Epitope_Rep3 993.5607295219299 993.55962993586 46.907 2 0.11556760294401627 0.001963498245726977 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 45514 7093 ISETYDLK True NCI_RA007_Epitope_Rep1 967.48622716899 967.48512993586 31.584 2 0.11556694570310716 0.001963498245726977 0.9438714419765777 ['CON__P34955'] 110045 18326 THYDHVLIEL True PC9_epitope_Rep1 1238.6295373577398 1238.62789490379 75.279 3 0.11556486205840097 0.001963498245726977 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 136340 11692 YHAQMPDSL True PC9_epitope_Rep4 1060.46478053176 1060.4636899358602 52.736 2 0.11555764470609967 0.001963498245726977 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant'] 46616 21509 ITTDVLYTI True PC9_epitope_Rep5 1037.5644774896898 1037.5639749679299 87.769 1 0.11555335906997762 0.001963498245726977 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 105306 8207 STTQVVGILK True NCI_RA007_Epitope_Rep3 1044.6179100448799 1044.6168099358601 39.415 2 0.1155512218434422 0.001963498245726977 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 29787 13676 FVTEGSHFVEA True PC9_epitope_Rep5 1221.56660274801 1221.56550993586 57.63 2 0.11554451441256347 0.001963498245726977 0.9438714419765777 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 88898 6979 REAQSFISA True NCI_RA007_Epitope_Rep5 1007.5036085686298 1007.50250993586 33.526 2 0.1155423685983858 0.001963498245726977 0.9438714419765777 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 9671 19774 AYGNVFSAF True PC9_epitope_Rep6 974.4497820906199 974.44923496793 88.718 1 0.11552659048941662 0.001963498245726977 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 105518 12121 SVDGVIKEV True PC9_epitope_Rep2 944.51786165044 944.51676993586 51.933 2 0.11552603240493775 0.001963498245726977 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 75031 11108 NMDNM[Oxidation]FESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 47.761 2 0.11552578036763263 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 9664 21620 AYGNVFSAF True PC9_epitope_Rep2 974.4497820906199 974.44868993586 88.635 2 0.11552262169171804 0.001963498245726977 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 57052 5873 LEEGSVEA True H1975_Epitope_Rep2 832.3814277472799 832.38087496793 27.576 1 0.11552129166430931 0.001963498245726977 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 32000 13153 GETIFVTAP True NCI_RA007_Epitope_Rep4 933.48074786573 933.4801949679301 57.691 1 0.11551129784257261 0.001963498245726977 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 105774 15943 SVIEQGGIQTV True PC9_epitope_Rep3 1129.59790287629 1129.5968099358602 66.471 2 0.11550899792227097 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'ENST00000566321.5_1_15:29046634-29050027:+|nuORF', 'ENST00000562423.5_1_15:29046609-29050027:+|nuORF'] 75622 10958 NQSDTSVSL True PC9_epitope_Rep1 949.43525422529 949.4347049679301 47.038 1 0.11549868908207907 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 95613 13922 SATQVYTIL True H1975_Epitope_Rep2 994.53351171458 994.5329649679301 58.698 1 0.11547999087464658 0.001963498245726977 0.9438714419765777 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000481241.1_1_3:180491477-180491675:-|nuORF'] 67003 11219 LTAHEPPLLY True H1975_Epitope_Rep2 1152.6179100448799 1152.6168099358601 48.195 2 0.11547684863994137 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000100299|P15289-2|ARSA', 'nc|ENSG00000100299|P15289|ARSA', 'ENSG00000100299|ENST00000216124|ARSA'] 29348 17934 FVEEEEHFL True PC9_epitope_Rep1 1177.52915461013 1177.52804993586 73.774 2 0.11546695451834149 0.001963498245726977 0.9438714419765777 ['ENSG00000168159|ENST00000305943|RNF187'] 98507 18718 SILFVPTSAPR True PC9_epitope_Rep3 1186.6710082468999 1186.66990993586 77.224 2 0.11545558908058039 0.001963498245726977 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 130603 15777 VVAEELENV True PC9_epitope_Rep4 1000.50769088956 1000.50658993586 68.612 2 0.11543896654661016 0.001963498245726977 0.9438714419765777 ['ENSG00000167196|ENST00000308275|FBXO22', 'FBXO22|p.R96H|1|0.24|ENSG00000167196|chr15:75913210-75913210|G/A|missense_variant', 'nc|ENSG00000167196|Q8NEZ5-3|FBXO22'] 108377 9547 TEDQVIYAA True H1975_Epitope_Rep2 1008.4763907612798 1008.47528993586 41.694 2 0.11543677914405416 0.001963498245726977 0.9438714419765777 ['ENSG00000081177|ENST00000685843|EXD2', 'nc|ENSG00000081177|Q9NVH0-2|EXD2'] 4302 14043 AILDYLITK True NCI_RA007_Epitope_Rep3 1048.61684741572 1048.61574993586 62.545 2 0.1154347525499764 0.001963498245726977 0.9438714419765777 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'nc|ENSG00000100697|Q9UPY3-3|DICER1'] 35684 4347 GTNPGIITK True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 23.331 2 0.11542986741365611 0.001963498245726977 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 11818 11371 DHLPNAAL True PC9_epitope_Rep5 849.43446637965 849.43336993586 48.735 2 0.11542426978526578 0.001963498245726977 0.9438714419765777 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 105444 15037 SVAQDIPKL True PC9_epitope_Rep2 969.5494961318899 969.54838993586 63.096 2 0.11542338637772193 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 307 18947 AAIASLLYL True H1975_Epitope_Rep3 933.55351888317 933.55242993586 79.462 2 0.11541769603998735 0.001963498245726977 0.9438714419765777 ['ENSG00000172992|ENST00000651974|DCAKD'] 88903 5998 REAQSLISA True NCI_RA007_Epitope_Rep3 973.5192586327698 973.51816993586 30.57 2 0.11541416420036464 0.001963498245726977 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000463859.5_1_1:70703183-70712812:+|nuORF'] 26733 20794 FLDGNELTL True PC9_epitope_Rep4 1020.51277627 1020.51227496793 88.132 1 0.11540799716142677 0.001963498245726977 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 52295 9978 KPAEFTVDA True PC9_epitope_Rep5 976.4865615221598 976.48546993586 43.355 2 0.11540480202617434 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 137946 5762 YPTEDVPR True H1975_Epitope_Rep3 975.4661604307498 975.46506993586 27.189 2 0.11540464693820102 0.001963498245726977 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF'] 3918 12392 AHDGGIYAL True PC9_epitope_Rep5 915.44503106335 915.44392993586 52.662 2 0.11540246677737902 0.001963498245726977 0.9438714419765777 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 21213 19276 ERFLSQVL True PC9_epitope_Rep5 990.5498304850599 990.54872993586 79.188 2 0.11539623287484244 0.001963498245726977 0.9438714419765777 ['ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1'] 91566 17700 RPALPVSYLQA True PC9_epitope_Rep2 1213.68190728377 1213.68080993586 73.364 2 0.11539320190809138 0.001963498245726977 0.9438714419765777 ['ENSG00000167615|ENST00000326764|LENG8'] 127454 10580 VQSNRILGV True PC9_epitope_Rep2 984.5716285587998 984.57052993586 46.013 2 0.11537551743568279 0.001963498245726977 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 96354 10516 SEFTKIITP True NCI_RA007_Epitope_Rep3 1034.5648118428599 1034.56370993586 48.424 2 0.11537377973489366 0.001963498245726977 0.9438714419765777 ['ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 13867 20649 DRDDFPVVL True PC9_epitope_Rep3 1074.53457434374 1074.53346993586 84.698 2 0.11535832076826731 0.001963498245726977 0.9438714419765777 ['ENSG00000126458|ENST00000246792|RRAS'] 34632 13930 GQIGMIQAL True NCI_RA007_Epitope_Rep3 929.5004377644899 929.49988496793 62.106 1 0.115356190639207 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A4|p.A859V|1|0.26|ENSG00000132681|chr1:160176588-160176588|C/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF'] 53885 12715 KYIDQKFVL True PC9_epitope_Rep6 1152.6542955536 1152.6531899358602 60.389 2 0.11534992173104612 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 37736 11922 HAVGDIPGV True PC9_epitope_Rep1 863.45011644379 863.44900993586 50.724 2 0.11534041371186844 0.001963498245726977 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 78277 16533 PARTGIISL True PC9_epitope_Rep1 926.5549158655 926.55380993586 68.417 2 0.11532326650061771 0.001963498245726977 0.9438714419765777 ['ENSG00000215217|ENST00000399810|CFAP90'] 114029 12323 TRMQDTSVSF True PC9_epitope_Rep5 1170.5339227207398 1170.53282993586 52.392 2 0.11532169729369882 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 13870 18604 DRDDFPVVL True PC9_epitope_Rep6 1074.53457434374 1074.53346993586 84.204 2 0.1153177241404855 0.001963498245726977 0.9438714419765777 ['ENSG00000126458|ENST00000246792|RRAS'] 138025 19298 YQDEVFGGF True PC9_epitope_Rep6 1060.4501760134397 1060.44906993586 86.877 2 0.11530781613892613 0.001963498245726977 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1'] 95660 10444 SAVPPGTSL True PC9_epitope_Rep6 827.43888305375 827.43778993586 50.926 2 0.11530759302089161 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 7524 13212 ASETGFLTY True H1975_Epitope_Rep3 987.4549270407099 987.4543749679301 56.074 1 0.11528373198049226 0.001963498245726977 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 63908 18534 LPVWLENHTA True PC9_epitope_Rep1 1178.60840799034 1178.60730993586 76.079 2 0.11527784973585259 0.001963498245726977 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 136905 13822 YKDGTELEL True PC9_epitope_Rep1 1066.51825557326 1066.51767496793 58.01 1 0.11527188129924301 0.001963498245726977 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 1801 12508 AEIDAHLVALA True H1975_Epitope_Rep1 1121.60807363717 1121.6069699358602 53.153 2 0.11526719850865158 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 114014 7298 TRMNEEQIAA True PC9_epitope_Rep5 1161.54482175761 1161.54372993586 33.034 2 0.1152655682870365 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 22438 11930 ETFSYPESY True H1975_Epitope_Rep3 1121.4553209635299 1121.4542299358602 51.044 2 0.11526432321288493 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000047634|Q9UN30-2|SCML1', 'nc|ENSG00000047634|Q9UN30-1|SCML1', 'ENSG00000047634|ENST00000380041|SCML1'] 13189 17576 DLTDYLM[Oxidation]K True PC9_epitope_Rep5 1013.47394861357 1013.47284993586 72.615 2 0.11526387198113602 0.001963498245726977 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 52898 16661 KRGDVIYIL True PC9_epitope_Rep5 1075.6389798426299 1075.6378899358601 69.091 2 0.11526248892082261 0.001963498245726977 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENSG00000005020|ENST00000345317|SKAP2'] 37627 9552 HAAEALLL True NCI_RA007_Epitope_Rep3 836.47560291564 836.4745099358599 44.659 2 0.1152612675200604 0.001963498245726977 0.9438714419765777 ['DAPP1-SLC4A4|1|fusion', 'DAPP1-SLC4A4|2|fusion', 'ENST00000507994.1_1_4:100738070-100784201:+|nuORF', 'nc|ENSG00000070190|Q9UN19-2|DAPP1', 'ENSG00000070190|ENST00000512369|DAPP1'] 8540 3365 ATYHGSFSTK True NCI_RA007_Epitope_Rep4 1097.51417325233 1097.5130699358601 18.763 2 0.11525679417520061 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3', 'ENST00000491769.1_1_2:238233419-238250825:-|nuORF', 'ENST00000493608.1_1_2:238242084-238243404:-|nuORF'] 22290 16635 ETDYDQYALLY True H1975_Epitope_Rep2 1392.60852712964 1392.6074299358602 69.219 2 0.11525460836542677 0.001963498245726977 0.9438714419765777 ['ENST00000462514.1_1_9:139874378-139874549:+|nuORF', 'ENSG00000107317|ENST00000371625|PTGDS'] 118565 4961 VEAAAELSAK True H1975_Epitope_Rep1 987.5236753068699 987.52256993586 24.157 2 0.11525212040923836 0.001963498245726977 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 106874 21121 SYIEHIFEI True PC9_epitope_Rep2 1149.57062549929 1149.57007496793 86.701 1 0.11525110835537737 0.001963498245726977 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 126381 21876 VPLEFPVVA True PC9_epitope_Rep5 969.5535188831699 969.55242993586 89.183 2 0.11524584820164493 0.001963498245726977 0.9438714419765777 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 132961 14176 VYTYIQSRF True PC9_epitope_Rep6 1175.5975089534697 1175.59640993586 66.404 2 0.11524542159993985 0.001963498245726977 0.9438714419765777 ['DYRK4|p.R355Kfs*16|1|0.21|ENSG00000010219|chr12:4610195-4610196|-/A|frameshift_variant', 'nc|ENSG00000010219|Q9NR20-5|DYRK4', 'nc|ENSG00000010219|Q9NR20-2|DYRK4', 'nc|ENSG00000010219|Q9NR20|DYRK4', 'nc|ENSG00000127334|Q92630-2|DYRK2', 'ENSG00000127334|ENST00000344096|DYRK2', 'ENSG00000010219|ENST00000543431|DYRK4', 'nc|ENSG00000010219|Q9NR20-3|DYRK4', 'nc|ENSG00000010219|Q9NR20-4|DYRK4'] 98409 19224 SIIGRLLEV True PC9_epitope_Rep6 998.6124307416198 998.61132993586 86.597 2 0.11524379431673391 0.001963498245726977 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 17766 6918 EHVASSPAL True PC9_epitope_Rep5 909.4555957470499 909.45448993586 31.579 2 0.1152421020371814 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 9749 11594 AYLEAHETF True PC9_epitope_Rep6 1079.4923751785898 1079.4912699358601 55.712 2 0.11523816382726043 0.001963498245726977 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 28070 20067 FRDPLGYIA True PC9_epitope_Rep1 1050.5498304850598 1050.5487299358601 82.014 2 0.11523327614582772 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 131883 9345 VYDTNPAKF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 46.13 2 0.11523117346076658 0.001963498245726977 0.9438714419765777 ['ENSG00000139433|ENST00000318348|GLTP'] 101912 12454 SPLLLQAKA True PC9_epitope_Rep5 939.5753169569099 939.57420993586 52.904 2 0.11523042659836674 0.001963498245726977 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 65325 11313 LSELEPATEY True H1975_Epitope_Rep2 1150.5393849406598 1150.5382899358601 48.562 2 0.11522510445928355 0.001963498245726977 0.9438714419765777 ['ENSG00000145623|ENST00000274276|OSMR'] 21758 10058 ESDDGVVVY True H1975_Epitope_Rep2 981.4291062156899 981.42855496793 43.68 1 0.1152235699716583 0.001963498245726977 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 107082 17544 SYLTSASSL True PC9_epitope_Rep5 927.45492704071 927.45382993586 72.49 2 0.11522235164642879 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 32995 18378 GIVGGLSTV True PC9_epitope_Rep3 801.4596184983301 801.4590749679301 75.9 1 0.11522141160326911 0.001963498245726977 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 48802 3225 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 16.969 2 0.11521922962622752 0.001963498245726977 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 1876 8150 AEIIITKTP True H1975_Epitope_Rep2 984.58554728744 984.58444993586 36.299 2 0.11520737035224674 0.001963498245726977 0.9438714419765777 ['ENSG00000174306|ENST00000683867|ZHX3', 'nc|ENSG00000174306|Q9H4I2-2|ZHX3'] 25297 9205 FEEGLETTA True H1975_Epitope_Rep2 995.4447562798299 995.44364993586 40.36 2 0.11520414849070085 0.001963498245726977 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 27411 16917 FNDTFVHV True PC9_epitope_Rep3 977.4606811274899 977.45958993586 70.228 2 0.11520285155475214 0.001963498245726977 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 66995 17967 LTAERVEEL True PC9_epitope_Rep5 1058.5607890915799 1058.5596899358602 74.127 2 0.1151992969142898 0.001963498245726977 0.9438714419765777 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'ENST00000515254.1_1_5:137506426-137514303:-|nuORF'] 6765 10713 AQEPGNYEV True PC9_epitope_Rep5 1005.4403396057298 1005.43924993586 46.198 2 0.11518659274427626 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 102320 5597 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 26.916 2 0.11518020266602945 0.001963498245726977 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 83248 15450 QADLINELY True H1975_Epitope_Rep3 1077.53423999057 1077.5331499358601 64.843 2 0.11517680597911609 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 11771 16712 DHIHIIAL True PC9_epitope_Rep5 930.52870111766 930.52760993586 69.289 2 0.11517157301404732 0.001963498245726977 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 11919 13060 DHSGQVTIL True PC9_epitope_Rep3 968.49270953176 968.49160993586 55.262 2 0.1151663792627924 0.001963498245726977 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 21832 11664 ESDVGVVVY True H1975_Epitope_Rep1 965.47057710485 965.47002496793 49.855 1 0.1151647786464136 0.001963498245726977 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 7920 13177 ATDDITELY True H1975_Epitope_Rep2 1039.47097102767 1039.47037496793 55.81 1 0.11516410764091092 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 11866 16775 DHNINLVSM True PC9_epitope_Rep3 1041.4913296327702 1041.49022993586 69.671 2 0.11516236942069231 0.001963498245726977 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 39851 8919 HQGPATTVAF True PC9_epitope_Rep6 1027.50869394907 1027.50758993586 44.279 2 0.11515717039752975 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 38627 16335 HHIYLEGTLL True PC9_epitope_Rep4 1194.6397081186199 1194.63805490379 70.794 3 0.11515220828233752 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 105782 19537 SVIEQIVYV True PC9_epitope_Rep6 1048.580461907 1048.57936993586 87.813 2 0.1151503084152462 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 72703 15034 MYPDVFAHF True NCI_RA007_Epitope_Rep3 1125.4953523840497 1125.4942499358601 66.597 2 0.11514503859460443 0.001963498245726977 0.9438714419765777 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 104465 11068 SSLPTQLFK True NCI_RA007_Epitope_Rep5 1019.5651461960299 1019.56404993586 49.207 2 0.11514060112232496 0.001963498245726977 0.9438714419765777 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 12032 12755 DIDIRPGLY True H1975_Epitope_Rep2 1060.5553097883198 1060.5542099358602 54.165 2 0.1151401155861052 0.001963498245726977 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B', 'ENST00000484312.1_1_3:179298984-179304429:+|nuORF'] 64605 12538 LREGDPVSL True PC9_epitope_Rep3 984.52400966004 984.52290993586 53.25 2 0.1151363199781765 0.001963498245726977 0.9438714419765777 ['ENSG00000141499|ENST00000396463|WRAP53'] 41998 6691 IEDLSQQA True H1975_Epitope_Rep2 902.4345259493001 902.43397496793 30.646 1 0.11513579983368741 0.001963498245726977 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA'] 127456 11730 VQSNRILGV True PC9_epitope_Rep3 984.5716285587998 984.57052993586 50.139 2 0.11512545441112018 0.001963498245726977 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 96264 16496 SEEPWTVLP True H1975_Epitope_Rep2 1056.51277627 1056.51166993586 68.671 2 0.11512345808020094 0.001963498245726977 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF'] 54077 13271 KYLYVDKNF True PC9_epitope_Rep3 1188.6179100448796 1188.61627490379 56.082 3 0.11512274739262572 0.001963498245726977 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 31831 16388 GENPLQVLV True H1975_Epitope_Rep1 967.5338460677499 967.53329496793 68.395 1 0.11511964091569407 0.001963498245726977 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 106947 19550 SYLDNFIKI True PC9_epitope_Rep6 1111.59136094387 1111.59026993586 87.862 2 0.1151193672649573 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 123212 17573 VHLETILGA True PC9_epitope_Rep1 951.5389314481898 951.53782993586 72.387 2 0.11511824163269364 0.001963498245726977 0.9438714419765777 ['ENSG00000165591|ENST00000374900|FAAH2'] 131296 20207 VVQPLLVSV True PC9_epitope_Rep4 952.5957180483199 952.59516496793 85.864 1 0.11511805393300152 0.001963498245726977 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 39266 19790 HLPDAAALLPV True PC9_epitope_Rep4 1115.63389446219 1115.63278993586 84.248 2 0.11510937555131634 0.001963498245726977 0.9438714419765777 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 24562 19856 FALPGLLHA True PC9_epitope_Rep4 937.5385375253701 937.53744993586 84.506 2 0.1151031288393063 0.001963498245726977 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 29418 24099 FVFPGELLL True PC9_epitope_Rep3 1033.5848190114498 1033.5837299358602 97.98 2 0.1151026972525789 0.001963498245726977 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 107764 21709 TAMDVVYAL True PC9_epitope_Rep1 981.4841189940099 981.48357496793 88.336 1 0.1151011535526404 0.001963498245726977 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 133508 20656 WHDSDWIL True PC9_epitope_Rep2 1070.48214484806 1070.48104993586 84.889 2 0.11509333570255316 0.001963498245726977 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50'] 123067 16087 VHAEEVIVL True PC9_epitope_Rep2 1007.5651461960299 1007.56404993586 67.135 2 0.11508508147940494 0.001963498245726977 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'KDM3B|p.A1619Rfs*25|1|0.09|ENSG00000120733|chr5:138429926-138429927|-/C|frameshift_variant'] 27183 17202 FLSQPILL True H1975_Epitope_Rep1 929.5586042636099 929.55805496793 71.623 1 0.11508362936480507 0.001963498245726977 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 139930 22676 YVGEELIYL True PC9_epitope_Rep1 1097.5644774896898 1097.5633899358602 92.027 2 0.1150797561790935 0.001963498245726977 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000460211.5_1_2:242607386-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 104304 16757 SSELFTLTY True H1975_Epitope_Rep2 1059.51244191683 1059.5113499358602 69.692 2 0.11507160847721024 0.001963498245726977 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 86821 13986 QRPPTIVL True PC9_epitope_Rep1 922.5600012459399 922.55890993586 58.635 2 0.11506928085319183 0.001963498245726977 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 67933 16560 LTLGKLEQV True PC9_epitope_Rep5 999.5964463243098 999.59534993586 68.703 2 0.11506824872682143 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 113820 5000 TREATQAEI True PC9_epitope_Rep3 1017.5090878718897 1017.50798993586 24.324 2 0.11506339034933606 0.001963498245726977 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 6482 6093 APTGDLPRA True PC9_epitope_Rep4 896.4715801643599 896.47048993586 30.445 2 0.11505856697150585 0.001963498245726977 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 103152 20435 SQNDGFFAV True PC9_epitope_Rep2 983.4348603024699 983.43376993586 84.03 2 0.11505684601093816 0.001963498245726977 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 75038 10943 NMDNM[Oxidation]FESY True H1975_Epitope_Rep3 1165.40561135357 1165.40450993586 47.179 2 0.11505661862355158 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 105198 8818 STPLAGLAPK True NCI_RA007_Epitope_Rep1 953.55458151233 953.55348993586 38.303 2 0.11505010522302975 0.001963498245726977 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 73277 5852 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.50692993586 27.498 2 0.11504670826416806 0.001963498245726977 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 110214 21873 TIEDGIFEV True PC9_epitope_Rep1 1021.4967918526899 1021.49627496793 88.947 1 0.11504661610333715 0.001963498245726977 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 102418 14232 SPVVPQISA True PC9_epitope_Rep6 896.4967322830399 896.49562993586 66.632 2 0.11504611872987348 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 97900 12332 SHLVATVTV True PC9_epitope_Rep5 925.52328138405 925.52218993586 52.428 2 0.1150392822484048 0.001963498245726977 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 89792 13764 RFEEAHFTF True PC9_epitope_Rep6 1182.5458077337796 1182.54470993586 64.741 2 0.11503802188749111 0.001963498245726977 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 22144 9532 ESYSVYVYK True NCI_RA007_Epitope_Rep1 1136.5389910178399 1136.53847496793 41.073 1 0.11503246938202155 0.001963498245726977 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 136179 20427 YGIPAIVKL True PC9_epitope_Rep5 972.60080342876 972.59970993586 83.609 2 0.11503201764355216 0.001963498245726977 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP', 'ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 23769 13465 EYISTVKTL True PC9_epitope_Rep1 1052.57537652656 1052.57426993586 56.65 2 0.11502497267447598 0.001963498245726977 0.9438714419765777 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 114037 8721 TRMSTVSEL True PC9_epitope_Rep4 1022.5066453437399 1022.5055499358599 41.044 2 0.11502079889089027 0.001963498245726977 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 114876 6038 TTDSSYGQNY True H1975_Epitope_Rep2 1134.4465471849799 1134.44597496793 28.203 1 0.11501936480032449 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 32211 19180 GFGFVLFK True PC9_epitope_Rep6 913.5061747679299 913.50506993586 86.428 2 0.1150059670788028 0.001963498245726977 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'HNRNPDL|p.A199T|1|0.1|ENSG00000152795|chr4:82428295-82428295|C/T|missense_variant', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 14079 13347 DSDMQTLVY True H1975_Epitope_Rep3 1070.45902644498 1070.45847496793 56.601 1 0.11500321073379631 0.001963498245726977 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 13945 15418 DRIKDEFQL True PC9_epitope_Rep5 1162.59823722946 1162.5965849037902 64.315 3 0.11500316974784479 0.001963498245726977 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 109014 6738 TEVTPVTGA True H1975_Epitope_Rep3 873.4443623570098 873.44381496793 30.872 1 0.11499994115536909 0.001963498245726977 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 97008 6683 SEVPVTASA True H1975_Epitope_Rep3 859.42871229287 859.42816496793 30.661 1 0.1149968405954488 0.001963498245726977 0.9438714419765777 ['ENST00000420416.1_3_10:14920949-14938948:+|nuORF', 'ENST00000313519.9_2_10:14920918-14938948:+|nuORF'] 32749 6972 GHYTEGAELVD True H1975_Epitope_Rep1 1189.5251318588498 1189.5240299358602 31.859 2 0.11499603590421141 0.001963498245726977 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 88555 18066 RAIDFSPYL True PC9_epitope_Rep6 1080.56039516876 1080.55928993586 82.122 2 0.11498301123982904 0.001963498245726977 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 114330 15420 TSDDPWLTAY True H1975_Epitope_Rep1 1167.5084191655499 1167.5078749679299 64.582 1 0.11498062682289618 0.001963498245726977 0.9438714419765777 ['ENSG00000137055|ENST00000397292|PLAA', 'ENST00000521968.1_1_9:26919278-26919473:-|nuORF'] 64561 11094 LRDLEDSLAR True PC9_epitope_Rep1 1186.6305999868998 1186.6289549037901 47.56 3 0.11498018785209008 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 63513 13467 LPKEPQGIIA True PC9_epitope_Rep1 1064.62299542532 1064.62188993586 56.658 2 0.11497053825276313 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000474216.5_1_1:11137420-11140866:-|nuORF'] 57955 8213 LEQPTDPVA True H1975_Epitope_Rep3 968.4814761417199 968.48092496793 36.575 1 0.11496847206979421 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 70291 15237 LYPEGLAQL True NCI_RA007_Epitope_Rep5 1002.5385970950199 1002.53750993586 65.294 2 0.11496460610158483 0.001963498245726977 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 26059 12019 FHDNSGDVF True PC9_epitope_Rep5 1036.4250238947598 1036.42392993586 51.226 2 0.11496004617608152 0.001963498245726977 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 88267 11724 QYFPKAPEF True NCI_RA007_Epitope_Rep4 1125.5494961318898 1125.54838993586 52.065 2 0.11495220453667938 0.001963498245726977 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 1604 10009 AEFQVKITA True H1975_Epitope_Rep2 1005.5494961318899 1005.54838993586 43.489 2 0.11495155712518303 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 95240 7841 SADETWDSA True NCI_RA007_Epitope_Rep3 980.37231961556 980.37122993586 37.965 2 0.11494930695561278 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 4135 12710 AHTPVIISV True PC9_epitope_Rep6 935.54401682863 935.54290993586 60.367 2 0.11494520544322658 0.001963498245726977 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 76004 4376 NRISHGEVL True PC9_epitope_Rep4 1023.5461420869499 1023.54504993586 23.276 2 0.11491822713460903 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 108788 8165 TEQDVLTVKP True H1975_Epitope_Rep2 1128.60265390356 1128.60154993586 36.357 2 0.11490969668459496 0.001963498245726977 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 60076 18355 LHSLPIVSM True PC9_epitope_Rep2 995.54738795691 995.54628993586 75.933 2 0.11490728936928542 0.001963498245726977 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 35341 10419 GSYDPQQIFK True NCI_RA007_Epitope_Rep5 1181.57168812845 1181.5705899358602 46.704 2 0.11490374872141106 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'ENSG00000131653|ENST00000326181|TRAF7'] 5759 12883 APEEHPVLL True PC9_epitope_Rep1 1003.5338460677498 1003.53274993586 54.428 2 0.11490157960095097 0.001963498245726977 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 128349 10412 VSDNGPCLGY True H1975_Epitope_Rep3 1023.4331460503099 1023.43257496793 45.109 1 0.11488540657310936 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 75069 21162 NMLPQIFRV True PC9_epitope_Rep1 1116.6113851958 1116.61028993586 86.233 2 0.114883843465293 0.001963498245726977 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 106023 13467 SVLNLVIVK True NCI_RA007_Epitope_Rep4 983.6379172134699 983.63682993586 59.004 2 0.11488304394779728 0.001963498245726977 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 32042 8825 GEVLDPTAA True H1975_Epitope_Rep3 871.4287122928699 871.42816496793 38.953 1 0.11486520610724855 0.001963498245726977 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1', 'RUSF1|p.Q301H|1|0.38|ENSG00000140688|chr16:31493658-31493658|C/G|missense_variant', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 3949 14726 AHDVDPIEL True PC9_epitope_Rep2 1007.4923751785899 1007.49126993586 61.911 2 0.11486426662505139 0.001963498245726977 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 31462 10250 GEEEPPALP True H1975_Epitope_Rep2 937.4392769765698 937.43872496793 44.432 1 0.1148549310792466 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 106016 19222 SVLNELPSA True PC9_epitope_Rep5 928.48656152216 928.48546993586 78.977 2 0.11484880358793806 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000167608|Q7Z404|TMC4', 'TMC4|p.V56Cfs*94|1|0.22|ENSG00000167608|chr19:54172015-54172015|C/-|frameshift_variant', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 106871 21549 SYIEHIFEI True PC9_epitope_Rep1 1149.57062549929 1149.57007496793 87.71 1 0.11484638559073743 0.001963498245726977 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 21200 18279 ERFEIPIKV True PC9_epitope_Rep5 1129.6495445263297 1129.64788490379 75.323 3 0.11484152062227788 0.001963498245726977 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 8509 17170 ATVPGLLKV True PC9_epitope_Rep3 896.5695033004799 896.56840993586 71.201 2 0.1148379320596258 0.001963498245726977 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 52348 11417 KPFGQVIST True PC9_epitope_Rep5 975.5389314481899 975.53782993586 48.915 2 0.11483746751834092 0.001963498245726977 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 96318 11058 SEEVTPIAV True H1975_Epitope_Rep1 943.4862271689899 943.48512993586 47.496 2 0.11483474594805125 0.001963498245726977 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 1937 8747 AEIPEEHIP True H1975_Epitope_Rep3 1033.50802524273 1033.5069299358602 38.649 2 0.114832859427097 0.001963498245726977 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 103371 13980 SQVPEVTTV True PC9_epitope_Rep5 958.49712620586 958.49602993586 58.793 2 0.11483001058904987 0.001963498245726977 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 127129 5293 VQDENVRGV True PC9_epitope_Rep5 1014.5094222250598 1014.50832993586 25.373 2 0.11482221606795029 0.001963498245726977 0.9438714419765777 ['ENSG00000110536|ENST00000326674|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-2|PTPMT1', 'ENST00000534775.1_1_11:47587445-47593178:+|nuORF', 'ENST00000426530.2_1_11:47587445-47593178:+|nuORF'] 25508 7675 FEQEMATAA True H1975_Epitope_Rep2 996.4222470134398 996.4216949679301 34.473 1 0.11481515572294777 0.001963498245726977 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 131876 17703 VYDPSLKTLL True PC9_epitope_Rep6 1147.64887581999 1147.6477699358602 80.73 2 0.11481255927809704 0.001963498245726977 0.9438714419765777 ['ENSG00000057935|ENST00000405094|MTA3', 'nc|ENSG00000057935|Q9BTC8-2|MTA3'] 36560 19454 GVLDTLTKV True PC9_epitope_Rep2 944.55424715916 944.55314993586 80.211 2 0.11480853007792308 0.001963498245726977 0.9438714419765777 ['ENST00000495043.5_1_1:39330344-39338774:-|nuORF', 'ENSG00000214114|ENST00000397572|MYCBP'] 27101 20597 FLQEGDLISA True PC9_epitope_Rep3 1091.54989005471 1091.5487899358602 84.495 2 0.11480378937582117 0.001963498245726977 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 29192 6590 FVALSTNTTK True H1975_Epitope_Rep3 1080.58152453616 1080.5804299358601 30.302 2 0.11479910673037291 0.001963498245726977 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI'] 74075 12357 NHTVLPEAL True PC9_epitope_Rep6 992.5290950404799 992.52798993586 58.933 2 0.11479200067643386 0.001963498245726977 0.9438714419765777 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 1830 12019 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.4856749679301 51.312 1 0.11477249225157363 0.001963498245726977 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 38606 10652 HHINDTDTIL True PC9_epitope_Rep5 1177.57275075761 1177.57164993586 45.96 2 0.11477222405301285 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 31405 4143 GEDERELAA True H1975_Epitope_Rep3 988.4461532621598 988.44504993586 21.057 2 0.11477015903123262 0.001963498245726977 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 96125 7722 SEDVPYTA True H1975_Epitope_Rep2 880.38142774728 880.38087496793 34.655 1 0.11476542053540831 0.001963498245726977 0.9438714419765777 ['ENSG00000071553|ENST00000369762|ATP6AP1'] 113972 7210 TRLEADEVAA True PC9_epitope_Rep4 1073.53530261973 1073.5342099358602 35.039 2 0.11476456119541034 0.001963498245726977 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'nc|ENSG00000136811|Q5BJF6-9|ODF2', 'nc|ENSG00000136811|Q5BJF6-8|ODF2', 'nc|ENSG00000136811|Q5BJF6-5|ODF2'] 132430 18110 VYNPVIYVF True NCI_RA007_Epitope_Rep3 1112.5906326678798 1112.5895299358601 79.357 2 0.11475832733096036 0.001963498245726977 0.9438714419765777 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 4254 22532 AIIEYMPLL True PC9_epitope_Rep4 1061.5831047592899 1061.58200993586 94.906 2 0.11475381787168794 0.001963498245726977 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 89677 5354 REVQGFESA True NCI_RA007_Epitope_Rep4 1021.4828731240499 1021.48176993586 27.162 2 0.11475016681981827 0.001963498245726977 0.9438714419765777 ['ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14'] 84622 4690 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 25.414 2 0.11474814392269093 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 37962 6959 HEFLHEVPA True H1975_Epitope_Rep3 1077.5243440132099 1077.5232499358601 31.729 2 0.11474734910784183 0.001963498245726977 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 72141 21829 MRFLAATFL True PC9_epitope_Rep3 1068.57902243836 1068.57792993586 89.265 2 0.11474324340851408 0.001963498245726977 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 17318 17994 EHDPQYAVIL True PC9_epitope_Rep1 1183.5873381925899 1183.58624993586 74.007 2 0.11473876690464187 0.001963498245726977 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 15315 19625 EAITHLLGV True PC9_epitope_Rep5 951.5389314481898 951.53782993586 80.54 2 0.11473803846463555 0.001963498245726977 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 70506 11734 LYTEKFEEF True NCI_RA007_Epitope_Rep4 1204.5652057656796 1204.5641099358602 52.105 2 0.11473460600280028 0.001963498245726977 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 75726 7143 NQWDGTQHGV True PC9_epitope_Rep4 1140.49483479008 1140.49372993586 34.752 2 0.11473309327736823 0.001963498245726977 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 137157 21156 YLDPSVLSGV True PC9_epitope_Rep2 1048.54407639828 1048.5429699358601 86.83 2 0.1147329764018121 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 67287 5775 LTDPDGALAK True H1975_Epitope_Rep3 999.5236753068699 999.52256993586 27.239 2 0.11473136124008779 0.001963498245726977 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 53837 9315 KYGNANVW True PC9_epitope_Rep2 950.46101548066 950.45990993586 41.169 2 0.11471998219783569 0.001963498245726977 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 58379 6519 LEVLSGER True NCI_RA007_Epitope_Rep1 901.4868958753299 901.48578993586 29.372 2 0.11470364551076388 0.001963498245726977 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 29460 6455 FVIATSTK True H1975_Epitope_Rep3 865.49091862661 865.48982993586 29.804 2 0.114702189242268 0.001963498245726977 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 113382 19189 TQLGPPYHIL True PC9_epitope_Rep3 1137.61824439805 1137.6171499358602 79.028 2 0.11469914305513353 0.001963498245726977 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 106829 19042 SYIALPLTL True NCI_RA007_Epitope_Rep4 989.57973363101 989.57918496793 82.369 1 0.11468712108670112 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 95651 11155 SAVPPGTSL True PC9_epitope_Rep4 827.43888305375 827.43778993586 50.686 2 0.11468395994868434 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 102063 7226 SPPPPPPPP True PC9_epitope_Rep6 881.4647038787699 881.46360993586 36.906 2 0.11468093984219423 0.001963498245726977 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 21496 18747 ERQRWLVAL True PC9_epitope_Rep5 1169.6669259259697 1169.66527490379 77.122 3 0.11467469638873039 0.001963498245726977 0.9438714419765777 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3', 'ENST00000498106.1_1_7:30085848-30088836:+|nuORF', 'nc|ENSG00000106086|Q96JA3-3|PLEKHA8', 'nc|ENSG00000106086|Q96JA3-2|PLEKHA8', 'ENSG00000106086|ENST00000449726|PLEKHA8'] 6547 9783 APVLPHTAV True PC9_epitope_Rep4 903.51780208079 903.51670993586 45.272 2 0.1146741821741982 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'ENST00000471231.6_1_16:30937150-30941463:+|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B', 'nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 113439 16051 TQNPNYYNL True PC9_epitope_Rep1 1125.5090878718902 1125.50798993586 66.554 2 0.11467197594806211 0.001963498245726977 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 3947 15444 AHDVDPIEL True PC9_epitope_Rep1 1007.4923751785899 1007.49126993586 64.226 2 0.11466979554478751 0.001963498245726977 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 108439 5713 TEEKFIVKA True H1975_Epitope_Rep2 1063.5913609438699 1063.59026993586 26.973 2 0.11466502473193627 0.001963498245726977 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173986-53184887:+|nuORF'] 79006 17356 PFLQASPHF True PC9_epitope_Rep2 1042.5236157372199 1042.5225099358602 72.013 2 0.11466357055846046 0.001963498245726977 0.9438714419765777 ['ENSG00000147689|ENST00000690554|FAM83A'] 102153 15098 SPRPPLISV True PC9_epitope_Rep3 964.57056592964 964.56946993586 63.211 2 0.11466117878996175 0.001963498245726977 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 108333 3511 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 18.356 2 0.11466112296395475 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 7127 8309 AQYEEMAKC True PC9_epitope_Rep5 1071.4365171785898 1071.4354099358602 36.899 2 0.11464621840929624 0.001963498245726977 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 139941 19974 YVIDPIKGL True PC9_epitope_Rep1 1016.5906326678798 1016.58952993586 81.656 2 0.11464499908914424 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 113641 13797 TRDDSPLYI True PC9_epitope_Rep4 1078.5294889632999 1078.52838993586 60.967 2 0.11464232310564011 0.001963498245726977 0.9438714419765777 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 115635 23440 TVISLLTGL True PC9_epitope_Rep5 915.56408356687 915.56298993586 95.145 2 0.11463923001506858 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 75843 10761 NRDLATPVM True PC9_epitope_Rep2 1015.51206507735 1015.51096993586 46.711 2 0.11463189049441037 0.001963498245726977 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 129421 13529 VTEIMSMGY True H1975_Epitope_Rep2 1029.45110461357 1029.45057496793 57.176 1 0.11462601201732359 0.001963498245726977 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 9981 13675 AYSRVQYQF True PC9_epitope_Rep3 1160.5614577979202 1160.56036993586 57.668 2 0.11462523692153449 0.001963498245726977 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 92469 8737 RQYSVTDAL True NCI_RA007_Epitope_Rep3 1051.52982331647 1051.5287299358602 41.457 2 0.114618368475974 0.001963498245726977 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2'] 22182 8388 ETDAQSITY True H1975_Epitope_Rep2 1026.4505699362599 1026.4494699358602 37.217 2 0.11461523419319236 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 104635 11574 SSVVTVPSSNF True NCI_RA007_Epitope_Rep3 1122.55570371114 1122.55460993586 52.657 2 0.11460600225617859 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211893|P01859|IGHG2'] 87646 19383 QVADILFQTA True PC9_epitope_Rep6 1104.5815245361598 1104.5804299358601 87.208 2 0.11460550087677916 0.001963498245726977 0.9438714419765777 ['ENSG00000114491|ENST00000232607|UMPS'] 109510 10894 THAAQQILL True PC9_epitope_Rep4 993.5607295219299 993.55962993586 49.669 2 0.11460422444782618 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 97803 13113 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 55.714 2 0.11459714250463632 0.001963498245726977 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 1445 13634 AEEIPLKILA True H1975_Epitope_Rep2 1095.6539612004299 1095.65286993586 57.581 2 0.11459623417657185 0.001963498245726977 0.9438714419765777 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'ENST00000435000.2_1_1:146523151-146523364:+|nuORF', 'ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 64568 9911 LRDQGGVVL True PC9_epitope_Rep2 955.5450794577898 955.5439899358599 43.455 2 0.1145925079104736 0.001963498245726977 0.9438714419765777 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.R664W|1|0.6|ENSG00000100425|chr22:49797913-49797913|T/A|missense_variant'] 96334 5013 SEFESKVSA True H1975_Epitope_Rep2 982.4607406971398 982.4596499358599 24.365 2 0.1145829079653515 0.001963498245726977 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 102528 15042 SQADVIPAV True PC9_epitope_Rep6 898.4759968384599 898.47488993586 69.898 2 0.1145823299754026 0.001963498245726977 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 89231 10275 REIVIIDTP True NCI_RA007_Epitope_Rep3 1054.60225998074 1054.60116993586 47.49 2 0.11457369498515932 0.001963498245726977 0.9438714419765777 ['ENSG00000106560|ENST00000223293|GIMAP2'] 4129 15090 AHTPVIISV True PC9_epitope_Rep3 935.54401682863 935.54290993586 63.18 2 0.11456858211789168 0.001963498245726977 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 61974 16440 LLLPGELAK True PC9_epitope_Rep2 952.5957180483199 952.59462993586 68.478 2 0.11456310774456493 0.001963498245726977 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 25381 7167 FEIIDDHRA True H1975_Epitope_Rep1 1114.54072235334 1114.5396299358601 32.589 2 0.11456251096579023 0.001963498245726977 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000492525.1_1_8:29974982-29975219:-|nuORF', 'ENST00000406202.2_1_6:157297523-157298164:+|nuORF'] 7969 15243 ATDLDVANFY True H1975_Epitope_Rep3 1127.51350454599 1127.51297496793 64.04 1 0.1145503078214314 0.001985779258215361 0.9438714419765777 ['ENSG00000142252|ENST00000270257|GEMIN7'] 59889 5650 LHHDDPEVL True PC9_epitope_Rep6 1073.51417325233 1073.5130699358601 29.832 2 0.11454700821136665 0.001985779258215361 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 87539 19211 QTIQDIVTV True PC9_epitope_Rep4 1015.5549754351499 1015.55386993586 81.995 2 0.1145432481340146 0.001985779258215361 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF'] 83766 15531 QEEDFVLQV True H1975_Epitope_Rep2 1105.5291546101298 1105.52804993586 64.894 2 0.11453883137352498 0.001985779258215361 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000555305.5_1_14:76452129-76548711:+|nuORF', 'ENST00000554026.5_1_14:76542964-76548711:+|nuORF'] 14092 14224 DSDSDQLFY True H1975_Epitope_Rep1 1088.42983449168 1088.42872993586 59.891 2 0.11452864125634553 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 89329 8519 RELVKNWVP True NCI_RA007_Epitope_Rep5 1139.64512785223 1139.64402993586 39.452 2 0.11452577225529466 0.001985779258215361 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 125977 10406 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.49088993586 44.911 2 0.11452189966829301 0.001985779258215361 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 103264 14427 SQTDVKTFL True PC9_epitope_Rep1 1037.53932537101 1037.53822993586 60.317 2 0.11452101700141946 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF'] 132732 21584 VYSIVPQSW True PC9_epitope_Rep1 1077.54949613189 1077.54897496793 87.846 1 0.11451557236504176 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'ENST00000521120.1_1_12:50835423-50848201:+|nuORF'] 87353 13731 QTDFGMYDY True H1975_Epitope_Rep2 1138.4277263166998 1138.42717496793 57.962 1 0.1145143509438102 0.001985779258215361 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'nc|ENSG00000183506|A4QPH2-2|PI4KAP2', 'nc|ENSG00000183506|A4QPH2-4|PI4KAP2', 'ENST00000467443.5_1_22:21831964-21846319:-|nuORF', 'ENST00000462560.6_1_22:21830876-21842641:-|nuORF', 'ENST00000450651.5_1_22:21830386-21841179:-|nuORF', 'ENST00000492581.5_1_22:21065434-21067334:-|nuORF', 'ENST00000463608.5_1_22:21830433-21838406:-|nuORF', 'ENST00000466772.5_1_22:21065465-21081626:-|nuORF', 'ENST00000486209.5_1_22:21830876-21832684:-|nuORF'] 31762 10605 GELLFVHSA True H1975_Epitope_Rep1 971.50763131991 971.50652993586 45.746 2 0.1145107599564076 0.001985779258215361 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 83893 14400 QEIGAQMVLP True H1975_Epitope_Rep2 1084.5586809166 1084.55758993586 60.539 2 0.11450661274485979 0.001985779258215361 0.9438714419765777 ['ENST00000520503.1_1_8:33318275-33319160:-|nuORF', 'ENST00000327671.9_1_8:33311020-33319160:-|nuORF', 'ENST00000518672.5_1_8:33310907-33319160:-|nuORF'] 61979 15844 LLLPGELAK True PC9_epitope_Rep4 952.5957180483199 952.59462993586 68.867 2 0.11450612707680957 0.001985779258215361 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 73544 21168 NFLPPIIARF True PC9_epitope_Rep4 1186.6862643882198 1186.6851699358601 89.586 2 0.11450594660938432 0.001985779258215361 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF'] 31532 13161 GEFGGFGSV True NCI_RA007_Epitope_Rep3 855.3762827971899 855.37573496793 59.043 1 0.11449532158503155 0.001985779258215361 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 110196 15955 TIDQLYLEY True H1975_Epitope_Rep3 1156.5652057656798 1156.5641099358602 66.825 2 0.11449372050701348 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 102986 18393 SQISDTSVVL True PC9_epitope_Rep1 1047.5448046742702 1047.54370993586 75.539 2 0.11448434587174973 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 26375 14720 FIHQHFVEV True PC9_epitope_Rep5 1154.5872786229402 1154.5856249037902 61.619 3 0.11448242243945302 0.001985779258215361 0.9438714419765777 ['KLHL18|p.S161R|1|0.62|ENSG00000114648|chr3:47330032-47330032|C/A|missense_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 100481 12236 SLPKGVVEV True PC9_epitope_Rep2 926.54368247546 926.54258993586 52.376 2 0.11448207429891585 0.001985779258215361 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 103928 11361 SRPENAIIY True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 48.705 2 0.11447361996118098 0.001985779258215361 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 101929 5631 SPLNTPHTSA True PC9_epitope_Rep5 1023.4985231881901 1023.4974299358599 26.66 2 0.11446974684425582 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 74519 19189 NKTDVVLIL True PC9_epitope_Rep5 1013.6120963884499 1013.61098993586 78.85 2 0.11445930275802539 0.001985779258215361 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 54187 8440 KYPDRVPVI True NCI_RA007_Epitope_Rep4 1085.62332977849 1085.62222993586 39.281 2 0.11445894011413793 0.001985779258215361 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 1936 8961 AEIPEEHIP True H1975_Epitope_Rep2 1033.50802524273 1033.5069299358602 39.422 2 0.11444634035531606 0.001985779258215361 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 113223 19385 TQDTNTFFL True PC9_epitope_Rep6 1085.50293986229 1085.50184993586 87.215 2 0.11444405508413123 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 103189 13791 SQPPVQVSV True PC9_epitope_Rep5 939.5025459394699 939.50144993586 58.068 2 0.11444167596844869 0.001985779258215361 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 113575 19589 TRADLIFTV True PC9_epitope_Rep2 1034.5760452328998 1034.57494993586 80.732 2 0.11444006374349132 0.001985779258215361 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 84932 14340 QHVPGSPFSV True PC9_epitope_Rep2 1053.52434401321 1053.5232499358601 60.422 2 0.11443963849124705 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 113165 10838 TQDEVSQTL True PC9_epitope_Rep5 1019.47711903727 1019.47602993586 46.676 2 0.1144368466390135 0.001985779258215361 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF'] 132336 9358 VYLPTHTSL True NCI_RA007_Epitope_Rep3 1029.54949613189 1029.54838993586 43.901 2 0.11443136375873252 0.001985779258215361 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 107222 19971 SYPKIIEEF True PC9_epitope_Rep1 1124.57537652656 1124.57426993586 81.643 2 0.11443039640562461 0.001985779258215361 0.9438714419765777 ['ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'nc|ENSG00000144554|Q9BXW9-4|FANCD2'] 88517 7792 RADESTYVL True NCI_RA007_Epitope_Rep3 1052.51383889916 1052.51274993586 37.775 2 0.11442003919124961 0.001985779258215361 0.9438714419765777 ['ENSG00000115267|ENST00000649979|IFIH1'] 110190 15895 TIDQLYLEY True H1975_Epitope_Rep1 1156.5652057656798 1156.56467496793 66.449 1 0.11441431456375678 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 96305 7915 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43308993586 35.414 2 0.11441399581556541 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 9667 20920 AYGNVFSAF True PC9_epitope_Rep4 974.4497820906199 974.44868993586 88.628 2 0.11440555127867039 0.001985779258215361 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 28934 11330 FTEPNEISQY True H1975_Epitope_Rep2 1226.54553295026 1226.5449749679299 48.629 1 0.11440283310783617 0.001985779258215361 0.9438714419765777 ['ENSG00000143155|ENST00000367833|TIPRL'] 6785 8390 AQFDADELR True NCI_RA007_Epitope_Rep2 1063.4934378077498 1063.4923499358601 37.275 2 0.11440194293341908 0.001985779258215361 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 40021 4241 HQVEQTEL True NCI_RA007_Epitope_Rep3 982.4719740871799 982.47086993586 23.358 2 0.11438936604207495 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 75911 15026 NRDTQELLL True PC9_epitope_Rep1 1100.58258716532 1100.5814899358602 62.617 2 0.11438189152267539 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'EGFR-TEAD2|1|fusion', 'EGFR-TEAD2|3|fusion', 'EGFR-TEAD2|2|fusion', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 44726 10453 IPQLNSKAV True PC9_epitope_Rep5 968.5654805492 968.56438993586 45.194 2 0.11438059711941205 0.001985779258215361 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 47993 18830 KAIDVVVMV True PC9_epitope_Rep1 972.5677890483199 972.56668993586 77.216 2 0.11437567371111268 0.001985779258215361 0.9438714419765777 ['TRAF3IP1|p.S84T|1|0.25|ENSG00000204104|chr2:238325866-238325866|T/A|missense_variant', 'nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1', 'ENSG00000204104|ENST00000373327|TRAF3IP1'] 112862 10311 TPNRATFVV True PC9_epitope_Rep4 1003.5450794577899 1003.5439899358599 47.348 2 0.11437376036086139 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 71076 6166 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 28.731 1 0.11437307049081076 0.001985779258215361 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 29457 7897 FVHPGAATV True PC9_epitope_Rep4 897.4708518883699 897.46974993586 37.804 2 0.11437164834803425 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 75380 16747 NQDKNFAFL True PC9_epitope_Rep4 1095.53490869691 1095.53380993586 72.385 2 0.114365989316123 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 26013 11613 FHDESTQVQL True PC9_epitope_Rep2 1202.5567663402999 1202.5556699358601 49.995 2 0.11436385387289055 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 31636 6747 GEGTPGLTA True H1975_Epitope_Rep3 801.38684748089 801.3862949679301 30.905 1 0.1143613448063877 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000095066|Q96ED9-2|HOOK2', 'ENSG00000095066|ENST00000397668|HOOK2'] 103147 18716 SQMPTVIYV True PC9_epitope_Rep6 1036.5263181591597 1036.52577496793 84.633 1 0.11435867271713905 0.001985779258215361 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 76131 7382 NRPSVQAAL True PC9_epitope_Rep4 954.5246783663799 954.52358993586 35.735 2 0.11434922070417276 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 91052 20505 RLLDVLAPL True PC9_epitope_Rep4 1008.6331661861999 1008.63206993586 87.022 2 0.11434602534624705 0.001985779258215361 0.9438714419765777 ['ENSG00000182871|ENST00000651438|COL18A1'] 30268 8633 GAAKDLPGV True PC9_epitope_Rep5 826.4548674710599 826.45376993586 38.15 2 0.11434380248339479 0.001985779258215361 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 137110 15163 YLDDPTNSWY True H1975_Epitope_Rep2 1272.52988288612 1272.52878993586 63.479 2 0.11434378948951508 0.001985779258215361 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 36095 7714 GVEGSLIVEK True H1975_Epitope_Rep3 1029.57062549929 1029.5695299358601 34.655 2 0.11433852492070447 0.001985779258215361 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 127511 13242 VQVDGKIGL True PC9_epitope_Rep1 927.5389314481899 927.53782993586 55.801 2 0.11433512428271553 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 17584 19476 EHLQLISL True PC9_epitope_Rep2 951.5389314481899 951.53782993586 80.294 2 0.11432999413975074 0.001985779258215361 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 132421 16885 VYNPELDKW True PC9_epitope_Rep3 1162.5658744720197 1162.56476993586 70.104 2 0.11432936238249816 0.001985779258215361 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 109690 18027 THEPNFTII True PC9_epitope_Rep5 1070.53965972418 1070.53856993586 74.357 2 0.11432559466306412 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 7271 11149 ARPPGYEF True PC9_epitope_Rep3 935.45011644379 935.44900993586 47.884 2 0.11431733809616702 0.001985779258215361 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 83052 19721 PYLDSFYEY True PC9_epitope_Rep6 1195.5073565363898 1195.50677496793 88.515 1 0.1143159155539955 0.001985779258215361 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 112929 20752 TPQSLFILFG True H1975_Epitope_Rep3 1121.6120963884498 1121.61098993586 86.71 2 0.1143115609702247 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 118774 13587 VEDWDSFQA True H1975_Epitope_Rep3 1095.45090428943 1095.44980993586 57.545 2 0.11430682888268603 0.001985779258215361 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 114353 13128 TSDELQFGY True H1975_Epitope_Rep2 1058.4556553167 1058.45507496793 55.618 1 0.11429857216028713 0.001985779258215361 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 32422 8252 GGGQIIPTAR True PC9_epitope_Rep3 968.5403284305199 968.53922993586 36.717 2 0.11429304838622806 0.001985779258215361 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'ENST00000590977.5_1_17:42929843-42931004:-|nuORF', 'nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 2045 12516 AELENLVNQAA True H1975_Epitope_Rep1 1170.58806646858 1170.58747496793 53.184 1 0.11428883708083466 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 41012 17392 HYGLPVVV True PC9_epitope_Rep2 882.49633836022 882.49524993586 72.16 2 0.11428291723493807 0.001985779258215361 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 64007 4917 LQDAEIAR True NCI_RA007_Epitope_Rep1 914.4821448480599 914.48104993586 23.207 2 0.11428144959954914 0.001985779258215361 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 31490 12395 GEEMPGLSV True H1975_Epitope_Rep3 917.4164333570099 917.4158849679301 52.866 1 0.1142666572696587 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 102385 20635 SPVSIMVV True PC9_epitope_Rep1 830.4571759701801 830.4566249679301 84.194 1 0.11426619494729273 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 97627 6363 SHANSAVVL True PC9_epitope_Rep2 896.47158016436 896.47048993586 29.878 2 0.11426493984045666 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 26203 9477 FHTTPNTSL True PC9_epitope_Rep1 1016.49270953176 1016.49160993586 41.311 2 0.11426277357122243 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 96902 8865 SETEYVIRC True H1975_Epitope_Rep2 1098.5015599633 1098.50046993586 39.068 2 0.11425615478554398 0.001985779258215361 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 86008 14850 QPITPGPSI True PC9_epitope_Rep1 908.4967322830399 908.49562993586 61.94 2 0.1142522382174194 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 31839 16309 GENPLQVLV True H1975_Epitope_Rep3 967.5338460677499 967.53329496793 68.206 1 0.11425211958552677 0.001985779258215361 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 74424 20875 NIVNSIVGV True PC9_epitope_Rep3 913.5232813840499 913.52218993586 85.568 2 0.11425168853777241 0.001985779258215361 0.9438714419765777 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10', 'SLC38A10|p.V758Cfs*76|1|0.35|ENSG00000157637|chr17:81246644-81246644|C/-|frameshift_variant'] 2417 6296 AEQLPGKVSC True H1975_Epitope_Rep2 1030.5117307241799 1030.5106299358602 29.155 2 0.11424949178304529 0.001985779258215361 0.9438714419765777 ['ENSG00000174306|ENST00000683867|ZHX3', 'nc|ENSG00000174306|Q9H4I2-2|ZHX3'] 82402 17986 PVAEYFSGV True PC9_epitope_Rep6 967.4650978015899 967.46400993586 81.81 2 0.11424545849491359 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 74224 13653 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 57.656 2 0.1142369059886874 0.001985779258215361 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 135505 13772 YEDSGIPLP True H1975_Epitope_Rep1 989.4705771048499 989.47002496793 58.117 1 0.11423368966878197 0.001985779258215361 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 83772 8640 QEEEEEARWRR True PC9_epitope_Rep1 1516.7018674341996 1516.70023490379 38.072 3 0.11423132425386787 0.001985779258215361 0.9438714419765777 ['ENST00000334512.9_1_10:80878754-80899516:+|nuORF'] 47383 14812 IYIGGQEHF True PC9_epitope_Rep1 1062.5134449763398 1062.5123499358601 61.795 2 0.11422979993169813 0.001985779258215361 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 138804 7172 YSDGPNPEV True H1975_Epitope_Rep2 976.4137905047199 976.41324496793 32.52 1 0.11422920046972333 0.001985779258215361 0.9438714419765777 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant'] 63742 18663 LPRLPVPAV True PC9_epitope_Rep4 960.6120368187999 960.61092993586 79.865 2 0.1142275009959887 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 110102 7170 TIAPALVSK True NCI_RA007_Epitope_Rep4 898.5487678559 898.54766993586 34.203 2 0.11422598015696431 0.001985779258215361 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 76857 22496 NVIDYIDTI True PC9_epitope_Rep5 1064.53899101784 1064.5378899358602 91.534 2 0.11422211984551689 0.001985779258215361 0.9438714419765777 ['ENSG00000156017|ENST00000376834|CARNMT1'] 19953 13010 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep1 1154.4801561928198 1154.47957496793 55.125 1 0.11421603205307435 0.001985779258215361 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 137668 14717 YLYYISNEY True H1975_Epitope_Rep2 1226.54955570154 1226.5484499358602 61.769 2 0.11420688632049593 0.001985779258215361 0.9438714419765777 ['ENSG00000197635|ENST00000360534|DPP4', 'ENST00000434918.6_1_2:162849795-162888681:-|nuORF'] 106046 17540 SVLQSIEKI True PC9_epitope_Rep4 1015.5913609438699 1015.59026993586 75.482 2 0.114199954325289 0.001985779258215361 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 90414 13641 RIPDGVVSV True PC9_epitope_Rep5 940.5341804209199 940.53308993586 57.493 2 0.11419199085732039 0.001985779258215361 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1'] 106665 20943 SYADQMFLL True PC9_epitope_Rep6 1086.50558271458 1086.5044899358602 93.341 2 0.1141879305222559 0.001985779258215361 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 75862 14757 NRDNVGLVL True PC9_epitope_Rep1 998.5508931142199 998.54978993586 61.581 2 0.1141853691439578 0.001985779258215361 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 95699 12339 SAYEFYHAL True NCI_RA007_Epitope_Rep2 1099.49746055903 1099.49636993586 52.601 2 0.11418176675891308 0.001985779258215361 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 95087 6382 RYSSM[Oxidation]AASF True PC9_epitope_Rep4 1034.44913084806 1034.4480299358602 31.634 2 0.11418077589181824 0.001985779258215361 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 16180 9827 EEEYPGITA True H1975_Epitope_Rep1 1007.4447562798298 1007.44364993586 42.727 2 0.1141761600470428 0.001985779258215361 0.9438714419765777 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 87168 20547 QSLAGGIIGV True PC9_epitope_Rep5 913.5232813840499 913.52218993586 84.078 2 0.11417597717314748 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 136554 13226 YHSEVPVSL True PC9_epitope_Rep4 1029.51311062317 1029.51257496793 58.769 1 0.1141693748263316 0.001985779258215361 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 103919 15534 SRNEALIAL True PC9_epitope_Rep5 985.5556441414899 985.55454993586 64.762 2 0.11416867829995948 0.001985779258215361 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'ENSG00000120756|ENST00000457734|PLS1'] 125102 16536 VLPGVDALSNI True H1975_Epitope_Rep1 1096.61282466444 1096.61172993586 68.979 2 0.11416551443041884 0.001985779258215361 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 6876 17227 AQIHDLVLV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 74.271 2 0.11416251511136441 0.001985779258215361 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 88848 5114 READPQLGP True H1975_Epitope_Rep2 981.4879585044898 981.48686993586 24.752 2 0.1141591743779833 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000010803|Q96GD3-3|SCMH1', 'nc|ENSG00000010803|Q96GD3|SCMH1', 'ENSG00000010803|ENST00000695335|SCMH1', 'nc|ENSG00000010803|Q96GD3-6|SCMH1', 'nc|ENSG00000010803|Q96GD3-5|SCMH1', 'nc|ENSG00000010803|Q96GD3-4|SCMH1', 'nc|ENSG00000010803|Q96GD3-2|SCMH1'] 115824 14718 TVMDSKIVQV True PC9_epitope_Rep5 1118.60054572858 1118.59997496793 61.611 1 0.11415366588150179 0.001985779258215361 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 32584 8598 GHASVVNTL True PC9_epitope_Rep1 896.47158016436 896.47048993586 37.908 2 0.11414723422863857 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 103106 15888 SQLPPLREI True PC9_epitope_Rep1 1051.60259433391 1051.6014899358602 65.923 2 0.1141468595141489 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 8635 16363 AVANIVNSV True PC9_epitope_Rep3 885.49198125577 885.49088993586 68.076 2 0.11414623267466076 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 76052 16086 NRLETPMEL True PC9_epitope_Rep5 1101.54884450889 1101.54774993586 66.863 2 0.11414573984906302 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant', 'ENST00000460333.5_1_1:12359354-12409038:+|nuORF'] 48536 4972 KEFPSQASP True NCI_RA007_Epitope_Rep4 989.4818104948898 989.48070993586 25.596 2 0.11414374260182136 0.001985779258215361 0.9438714419765777 ['ENSG00000138641|ENST00000402738|HERC3', 'ENST00000506714.5_1_4:89300148-89319290:+|nuORF', 'nc|ENSG00000138642|Q8IVU3-3|HERC6', 'nc|ENSG00000287542|Q15034-2|HERC3', 'ENSG00000138642|ENST00000264346|HERC6', 'nc|ENSG00000138642|Q8IVU3-2|HERC6'] 103251 17515 SQSSVVYEI True PC9_epitope_Rep5 1010.4920408254198 1010.49094993586 72.376 2 0.1141432708752073 0.001985779258215361 0.9438714419765777 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 116683 12304 TYISWKEEL True NCI_RA007_Epitope_Rep4 1167.58119018299 1167.58008993586 54.323 2 0.11413618315696027 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 136391 12034 YHEDIHTYL True PC9_epitope_Rep2 1189.54038800017 1189.53874490379 51.605 3 0.11413320408572032 0.001985779258215361 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2'] 139933 21657 YVGEELIYL True PC9_epitope_Rep4 1097.5644774896898 1097.5633899358602 91.495 2 0.11413290470420195 0.001985779258215361 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000460211.5_1_2:242607386-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 103269 10994 SQTFVNPHV True PC9_epitope_Rep3 1027.5086939490698 1027.50758993586 47.273 2 0.11412804708330841 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000602029.1_1_19:50519188-50519419:-|nuORF'] 7951 6989 ATDINGDDY True H1975_Epitope_Rep3 982.3879696796998 982.38686993586 31.845 2 0.11412480452820671 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 101908 12725 SPLLLQAKA True PC9_epitope_Rep3 939.5753169569099 939.57420993586 53.968 2 0.11411882755431324 0.001985779258215361 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 105995 14106 SVLKSIQEV True PC9_epitope_Rep5 1001.57571087973 1001.5746099358599 59.269 2 0.11411857104258442 0.001985779258215361 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 11758 16765 DHIHIIAL True PC9_epitope_Rep1 930.52870111766 930.52760993586 69.311 2 0.11411786033943892 0.001985779258215361 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 96802 10811 SESAIRLLAA True H1975_Epitope_Rep2 1029.5818588893299 1029.5807699358602 46.614 2 0.11411741412400295 0.001985779258215361 0.9438714419765777 ['ENSG00000134815|ENST00000328771|DHX34', 'ENST00000486327.6_1_19:47880370-47884327:+|nuORF'] 26233 14886 FHYEADGANVL True PC9_epitope_Rep4 1234.5618517207397 1234.56074993586 65.196 2 0.11411179373657086 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 2062 10192 AELGEAPVP True H1975_Epitope_Rep2 881.4494477374499 881.44834993586 44.208 2 0.11410980268499679 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 39511 8222 HPDYNNEL True PC9_epitope_Rep3 1000.4250238947601 1000.42392993586 36.604 2 0.11410224494021005 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 135550 6300 YEEGPGKNLP True H1975_Epitope_Rep2 1102.5294889632999 1102.52897496793 29.169 1 0.11410177942371298 0.001985779258215361 0.9438714419765777 ['ENSG00000127184|ENST00000247655|COX7C'] 128474 9824 VSEVSSLNY True H1975_Epitope_Rep3 996.4763907612801 996.47528993586 42.815 2 0.11409957790849173 0.001985779258215361 0.9438714419765777 ['ENSG00000117000|ENST00000372771|RLF'] 134956 16787 YAFPKAVSV True PC9_epitope_Rep3 980.5331177917599 980.53202993586 69.719 2 0.11409195851654458 0.001985779258215361 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 41981 7412 IEDGKAVIP True H1975_Epitope_Rep2 940.5229470308799 940.52184993586 33.453 2 0.11409030028010292 0.001985779258215361 0.9438714419765777 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant'] 2235 7946 AENVAVPEAA True H1975_Epitope_Rep2 969.4767251144499 969.47562993586 35.512 2 0.11408563399453796 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 58705 21561 LFKNDPLFF True PC9_epitope_Rep1 1139.6015317047497 1139.6004299358601 87.755 2 0.11408263750266744 0.001985779258215361 0.9438714419765777 ['ENSG00000103642|ENST00000261893|LACTB', 'nc|ENSG00000103642|P83111-2|LACTB'] 46451 12172 ITLTGVHQV True PC9_epitope_Rep5 966.5498304850602 966.54872993586 51.809 2 0.11408152573753962 0.001985779258215361 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion'] 106981 19118 SYLERHGLINF True PC9_epitope_Rep1 1347.6935345966297 1347.69187490379 78.327 3 0.11407827082259492 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 96326 10075 SEEWADNHLP True H1975_Epitope_Rep2 1196.50981614788 1196.50870993586 43.745 2 0.11407251278579286 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 123103 10817 VHAQIVSTL True PC9_epitope_Rep4 966.5498304850599 966.54872993586 49.367 2 0.11406951877456714 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 106340 4026 SVSDPVEDK True NCI_RA007_Epitope_Rep4 974.4556553167 974.45454993586 21.745 2 0.11406866624619029 0.001985779258215361 0.9438714419765777 ['ENSG00000038219|ENST00000040738|BOD1L1'] 6291 6755 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 30.788 2 0.11406698604435164 0.001985779258215361 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 39704 7283 HPTWALKEA True PC9_epitope_Rep6 1051.5450794577898 1051.54398993586 37.151 2 0.11406415313141166 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 107417 18683 SYTSGLETL True PC9_epitope_Rep5 969.4654917244101 969.46438993586 76.883 2 0.1140546784476904 0.001985779258215361 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 137231 13879 YLETVAAYY True H1975_Epitope_Rep1 1091.51752729727 1091.5169749679299 58.535 1 0.11405254011325579 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 72404 14992 MTELPAPLSY True H1975_Epitope_Rep1 1120.5474475265598 1120.5468749679299 62.912 1 0.11402828616979024 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 118569 5420 VEAAAELSAK True NCI_RA007_Epitope_Rep1 987.5236753068699 987.52256993586 25.155 2 0.11401732051359598 0.001985779258215361 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 9536 18869 AYAENIALL True PC9_epitope_Rep6 976.5229470308799 976.52184993586 85.228 2 0.11400022579405589 0.001985779258215361 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 2123 6151 AELQSRLAA True NCI_RA007_Epitope_Rep4 957.5243440132099 957.52324993586 30.271 2 0.1139981007467789 0.001985779258215361 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 9190 17847 AVPEIMDRI True PC9_epitope_Rep2 1042.5481162329 1042.5470099358602 73.949 2 0.11398883761000905 0.001985779258215361 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 27992 16480 FQVKEVDVGL True PC9_epitope_Rep6 1132.6128246644398 1132.61172993586 75.815 2 0.11398710915225366 0.001985779258215361 0.9438714419765777 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000598707.5_1_19:39306922-39322412:-|nuORF'] 27733 12521 FQDPYTRSL True PC9_epitope_Rep6 1125.54547338061 1125.54436993586 59.596 2 0.11396603657505665 0.001985779258215361 0.9438714419765777 ['ENST00000474760.1_1_6:105609928-105627738:-|nuORF'] 135917 11305 YETLTITQA True H1975_Epitope_Rep3 1038.5233409536997 1038.52277496793 48.591 1 0.11396482830042377 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 37220 20200 GVVDIFQTV True PC9_epitope_Rep6 976.52294703088 976.52184993586 90.371 2 0.1139397157178691 0.001985779258215361 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 138056 20026 YQDPVTLQL True PC9_epitope_Rep4 1075.55497543515 1075.55447496793 85.166 1 0.11393636042818037 0.001985779258215361 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 88966 3018 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 15.928 2 0.113932555956247 0.001985779258215361 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 6865 13009 AQIGSYVHV True PC9_epitope_Rep2 972.50288029264 972.50178993586 55.323 2 0.11392616920858264 0.001985779258215361 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 107771 21630 TAMDVVYAL True PC9_epitope_Rep5 981.4841189940099 981.48302993586 88.242 2 0.11392173777378313 0.001985779258215361 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 87827 20691 QVIQGLEAL True PC9_epitope_Rep1 969.5494961318898 969.5489449679301 84.412 1 0.1139178867951063 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 109616 15795 THDGSILIV True PC9_epitope_Rep1 953.51819600361 953.51708993586 65.568 2 0.11391650230444633 0.001985779258215361 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 6103 11367 APM[Oxidation]PPIIHA True PC9_epitope_Rep5 961.50552352537 961.50442993586 48.72 2 0.1139115424706882 0.001985779258215361 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 31603 9212 GEGDLSISA True H1975_Epitope_Rep2 847.39232678415 847.39177496793 40.387 1 0.11390329474011807 0.001985779258215361 0.9438714419765777 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1', 'ENST00000526890.5_1_11:3039642-3048038:-|nuORF'] 102604 21904 SQAPFIVAL True PC9_epitope_Rep2 944.5331177917599 944.53202993586 89.73 2 0.11390324227076261 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 103870 19712 SRLDSVLLL True PC9_epitope_Rep4 1014.6073453611799 1014.60624993586 83.945 2 0.11390268465371442 0.001985779258215361 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 96290 7679 SEETPAISP True H1975_Epitope_Rep1 929.4341915961298 929.43308993586 34.503 2 0.11389909312990833 0.001985779258215361 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 113717 11553 TRDETNYGIP True PC9_epitope_Rep5 1164.5411162761598 1164.54000993586 49.434 2 0.11389894686154764 0.001985779258215361 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 74411 12633 NIVEKLREV True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 53.903 2 0.11389877629401567 0.001985779258215361 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 15145 12314 EAEPHPLWEY True H1975_Epitope_Rep1 1269.56660274801 1269.56550993586 52.393 2 0.1138830657784476 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 43424 12515 IHSPVVNEL True PC9_epitope_Rep2 1006.54474510462 1006.54364993586 53.446 2 0.11388178265839803 0.0020131654630280564 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 14855 9740 DYFEQYGK True NCI_RA007_Epitope_Rep1 1048.4501760134401 1048.44906993586 41.887 2 0.11387766186173108 0.0020131654630280564 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 113811 12180 TRDVVHLDL True PC9_epitope_Rep4 1066.5771078620598 1066.5760099358602 54.667 2 0.11387554626161138 0.0020131654630280564 0.9438714419765777 ['ENSG00000164543|ENST00000319357|STK17A'] 109729 14313 THGIFTIST True PC9_epitope_Rep4 975.5025459394701 975.50144993586 62.958 2 0.1138647021016104 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 21328 15017 ERLDPGLAL True PC9_epitope_Rep6 982.5447451046198 982.54364993586 69.789 2 0.11385841265331076 0.0020131654630280564 0.9438714419765777 ['ENSG00000237649|ENST00000428849|KIFC1'] 127459 10130 VQSNRILGV True PC9_epitope_Rep4 984.5716285587998 984.57052993586 46.64 2 0.11385618207862648 0.0020131654630280564 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 38797 6946 HHYSGNNIEL True PC9_epitope_Rep4 1182.5417849825 1182.54013490379 33.954 3 0.11385121420231449 0.0020131654630280564 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 39739 8920 HPYFYAPE True H1975_Epitope_Rep1 1022.4497820906199 1022.44868993586 39.215 2 0.11384609536527333 0.0020131654630280564 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 101599 9057 SPFAEGTSA True PC9_epitope_Rep2 865.38176210045 865.3812149679301 40.184 1 0.11384594037031666 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 63976 11030 LQAEVKQVL True PC9_epitope_Rep4 1026.6073453611798 1026.6062499358602 50.203 2 0.11384417374647487 0.0020131654630280564 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 8983 11365 AVHETLVAV True PC9_epitope_Rep2 937.5232813840498 937.52218993586 49.038 2 0.1138432815618191 0.0020131654630280564 0.9438714419765777 ['SLC39A3|p.V234Sfs*3|1|0.26|ENSG00000141873|chr19:2732996-2732996|C/-|frameshift_variant', 'ENSG00000141873|ENST00000269740|SLC39A3'] 1646 5712 AEGAPQVEA True H1975_Epitope_Rep3 870.4083112014599 870.40776496793 27.0 1 0.11384115306248861 0.0020131654630280564 0.9438714419765777 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'ENSG00000122786|ENST00000361675|CALD1', 'nc|ENSG00000122786|Q05682-5|CALD1', 'nc|ENSG00000122786|Q05682-3|CALD1', 'ENST00000472096.1_1_7:134625950-134632541:+|nuORF'] 26046 9615 FHDLEGNAV True PC9_epitope_Rep4 1000.4614094034799 1000.46030993586 44.61 2 0.11384094990775681 0.0020131654630280564 0.9438714419765777 ['ENSG00000099219|ENST00000339450|ERMP1'] 32845 5512 GIHETTFN True NCI_RA007_Epitope_Rep1 917.4242956187701 917.42318993586 25.51 2 0.11383734645478842 0.0020131654630280564 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000437653.1_1_3:175695464-175695797:-|nuORF', 'ENST00000418351.1_1_15:44281261-44281585:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 43426 13554 IHSPVVNEL True PC9_epitope_Rep3 1006.54474510462 1006.54364993586 57.19 2 0.11383682494761813 0.0020131654630280564 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 130894 11979 VVHDGFEGL True PC9_epitope_Rep6 971.47124581119 971.47014993586 57.347 2 0.11383383207383298 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 87580 13972 QTPQRLLEV True PC9_epitope_Rep1 1082.6084079903399 1082.60730993586 58.581 2 0.1138180173191315 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 40121 6761 HRDNAGYTAL True PC9_epitope_Rep1 1116.5312202987998 1116.53012993586 30.811 2 0.1138085115561211 0.0020131654630280564 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 17251 19998 EHAPSIIFM True PC9_epitope_Rep5 1043.5110024481899 1043.5099099358602 81.976 2 0.11380826589791342 0.0020131654630280564 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 8186 8226 ATGENLPRV True PC9_epitope_Rep4 955.5086939490699 955.50758993586 39.103 2 0.11380346480001761 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 132542 23734 VYPGLAVFF True PC9_epitope_Rep1 1011.5429541994698 1011.54184993586 96.086 2 0.11379226865806141 0.0020131654630280564 0.9438714419765777 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 4038 10704 AHLGSSSVAL True PC9_epitope_Rep5 940.4977949122 940.49668993586 46.162 2 0.11379085008656377 0.0020131654630280564 0.9438714419765777 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 108594 5219 TEIGSIHSA True NCI_RA007_Epitope_Rep4 913.45051036661 913.44940993586 26.609 2 0.11378859428079222 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 11923 11039 DHSGQVTIL True PC9_epitope_Rep6 968.49270953176 968.49160993586 53.37 2 0.11378808606208217 0.0020131654630280564 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 138679 17364 YRTDMIQAL True PC9_epitope_Rep3 1109.55392988933 1109.55282993586 71.962 2 0.11378699360705886 0.0020131654630280564 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 87826 20708 QVIQGLEAL True PC9_epitope_Rep1 969.5494961318898 969.54838993586 84.479 2 0.11377735961393973 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 43273 16442 IHDGMNLEL True PC9_epitope_Rep2 1040.49608066004 1040.49498993586 68.485 2 0.11377378205859903 0.0020131654630280564 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 138334 14512 YRAPEVLL True PC9_epitope_Rep6 959.5440168286299 959.54290993586 67.704 2 0.1137675393789833 0.0020131654630280564 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 86169 5020 QPSQPVTSA True PC9_epitope_Rep5 913.4505103666099 913.4499649679301 24.341 1 0.11376729687829064 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 132092 21360 VYILC[Carbamidomethyl]YLSF True PC9_epitope_Rep5 1176.5889186951501 1176.58782993586 87.22 2 0.11376597194310746 0.0020131654630280564 0.9438714419765777 ['ENSG00000275591|ENST00000618742|XKR5'] 35457 15392 GTELGNELFY True H1975_Epitope_Rep3 1141.5291546101298 1141.52804993586 64.616 2 0.11375603397151883 0.0020131654630280564 0.9438714419765777 ['ENSG00000126821|ENST00000247225|SGPP1'] 39828 12584 HQFPFSSAL True NCI_RA007_Epitope_Rep4 1032.50288029264 1032.5017899358602 55.424 2 0.11375227652901237 0.0020131654630280564 0.9438714419765777 ['ENSG00000127249|ENST00000342695|ATP13A4', 'nc|ENSG00000127249|Q4VNC1-2|ATP13A4'] 46745 20093 IVAPGTFEV True PC9_epitope_Rep3 931.5014833103099 931.50038993586 82.539 2 0.11374779235024257 0.0020131654630280564 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 98549 19079 SILSEVQQA True PC9_epitope_Rep5 973.50802524273 973.50692993586 78.417 2 0.11372517071442644 0.0020131654630280564 0.9438714419765777 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 117219 18398 TYTVRTFAL True PC9_epitope_Rep1 1070.5760452329 1070.57494993586 75.558 2 0.1137240948397341 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 1850 10470 AEIEETLQAA True H1975_Epitope_Rep2 1073.5240692296898 1073.5229699358601 45.29 2 0.11372406931149484 0.0020131654630280564 0.9438714419765777 ['ENSG00000176903|ENST00000316836|PNMA1'] 96565 11711 SELPTTVTV True H1975_Epitope_Rep2 945.50187723313 945.50132496793 50.121 1 0.11371788560313764 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 34725 7232 GQNPTEAEL True NCI_RA007_Epitope_Rep3 957.44033960573 957.4397949679301 35.557 1 0.11371788121418652 0.0020131654630280564 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 56993 11065 LEEEALYAA True H1975_Epitope_Rep2 1007.4811417885498 1007.48004993586 47.592 2 0.11370854639629005 0.0020131654630280564 0.9438714419765777 ['ENST00000510527.5_1_4:113153247-113186224:+|nuORF', 'ENSG00000138660|ENST00000274000|AP1AR'] 1541 6674 AEETPPTSV True H1975_Epitope_Rep2 929.43419159613 929.43364496793 30.581 1 0.11370399508661175 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 81771 4355 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.6305699358602 21.868 2 0.11369809828520341 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 108652 6041 TELDAKTVTA True H1975_Epitope_Rep3 1047.54480467427 1047.54370993586 28.251 2 0.11369631718491399 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'ENST00000460031.5_1_1:43212370-43220777:-|nuORF'] 46183 8792 ITDHGSLIY True H1975_Epitope_Rep2 1017.51311062317 1017.51257496793 38.782 1 0.11369440313216776 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 103567 14914 SRDEYYHLL True PC9_epitope_Rep1 1194.56693710118 1194.5658499358601 62.189 2 0.11369340177278875 0.0020131654630280564 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 1782 7015 AEHRIDFVA True NCI_RA007_Epitope_Rep4 1056.53524305008 1056.5341499358601 33.611 2 0.11368854482914077 0.0020131654630280564 0.9438714419765777 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000488235.1_1_3:195969427-195975126:-|nuORF'] 52494 9057 KPNEGAIVEV True PC9_epitope_Rep4 1054.56587447202 1054.56476993586 42.419 2 0.11368721982982237 0.0020131654630280564 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 132341 12541 VYLPTHTSL True PC9_epitope_Rep6 1029.54949613189 1029.54838993586 59.674 2 0.11367937269490225 0.0020131654630280564 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 871 5560 ADLDVSGPK True NCI_RA007_Epitope_Rep1 900.4552613938799 900.45416993586 25.696 2 0.1136760364120294 0.0020131654630280564 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 1651 6675 AEGDISNVA True H1975_Epitope_Rep3 874.40322582102 874.40267496793 30.629 1 0.1136752849293926 0.0020131654630280564 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10', 'ENST00000483549.5_1_22:46114317-46136469:+|nuORF'] 127210 22627 VQIDGLVVL True PC9_epitope_Rep1 954.5749826037398 954.5744349679301 91.844 1 0.11367190350002726 0.0020131654630280564 0.9438714419765777 ['ENSG00000147677|ENST00000521861|EIF3H', 'ENST00000518034.5_1_8:117671049-117768048:-|nuORF', 'EIF3H|p.K48E|1|0.13|ENSG00000147677|chr8:116726163-116726163|T/C|missense_variant', 'EIF3H|p.E217Nfs*30|1|0.19|ENSG00000147677|chr8:116655914-116655914|C/-|frameshift_variant'] 103846 14640 SRIPFNQAL True PC9_epitope_Rep2 1044.5716285588 1044.5705299358601 61.581 2 0.11367015646393187 0.0020131654630280564 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303610-112303748:+|nuORF'] 115461 9107 TVFSHAQTV True PC9_epitope_Rep5 988.4977949121999 988.49668993586 39.976 2 0.11366645674307516 0.0020131654630280564 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 17470 19108 EHGNFLITV True PC9_epitope_Rep5 1028.52909504048 1028.52857496793 78.531 1 0.11366541643080955 0.0020131654630280564 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 83091 22559 PYNDYFEYF True PC9_epitope_Rep2 1256.50260550912 1256.50207496793 92.266 1 0.11366368574447563 0.0020131654630280564 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 52877 6956 KRFDDKYTL True PC9_epitope_Rep4 1184.6189726740397 1184.61733490379 33.991 3 0.1136606267037697 0.0020131654630280564 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 43274 16533 IHDGMNLEL True PC9_epitope_Rep2 1040.49608066004 1040.49498993586 68.833 2 0.11365882470441266 0.0020131654630280564 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 1960 10646 AEIQGVIDA True H1975_Epitope_Rep2 914.4709114580199 914.4703649679301 45.974 1 0.11365775921441186 0.0020131654630280564 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 21664 10969 ERTSFNYAM True PC9_epitope_Rep6 1117.4862442523297 1117.4851499358601 53.079 2 0.1136543744424997 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 14857 8876 DYFEQYGK True NCI_RA007_Epitope_Rep3 1048.4501760134401 1048.44906993586 42.005 2 0.11364764500060891 0.0020131654630280564 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 89117 8679 REFESAIVEA True NCI_RA007_Epitope_Rep3 1149.56660274801 1149.56550993586 41.219 2 0.11363589797431571 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 92207 5383 RQHLQEVGL True NCI_RA007_Epitope_Rep3 1078.5883412520998 1078.5872499358602 28.182 2 0.11363531772865614 0.0020131654630280564 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1', 'ENST00000451943.6_1_11:61067610-61070297:-|nuORF', 'ENST00000538470.2_1_11:61067610-61070684:-|nuORF'] 124624 6120 VLIAAHGNSLR True PC9_epitope_Rep4 1149.66184054553 1149.66019490379 30.551 3 0.11363336804092934 0.0020131654630280564 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 70156 21914 LYLENIDEF True PC9_epitope_Rep2 1154.54955570154 1154.5484499358602 89.769 2 0.11363134253798461 0.0020131654630280564 0.9438714419765777 ['ENSG00000077514|ENST00000263681|POLD3', 'ENST00000532497.5_1_11:74303703-74322559:+|nuORF', 'ENST00000532784.5_1_11:74303703-74306426:+|nuORF', 'ENST00000527458.5_1_11:74303652-74303820:+|nuORF'] 29268 18253 FVDGSAIQV True PC9_epitope_Rep5 934.47599683846 934.47488993586 75.224 2 0.11362975207454742 0.0020131654630280564 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 67219 11286 LTDLEPATEY True H1975_Epitope_Rep3 1150.5393849406598 1150.5382899358601 48.518 2 0.11362007659372346 0.0020131654630280564 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 37662 12866 HAGVISVL True PC9_epitope_Rep4 794.46503823194 794.46394993586 57.362 2 0.11361778254932138 0.0020131654630280564 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 114822 17285 TTDFIYQLY True H1975_Epitope_Rep1 1162.55464108198 1162.55354993586 71.948 2 0.11361081158354083 0.0020131654630280564 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 7319 12674 ARSDSWSL True PC9_epitope_Rep5 920.43519465564 920.43408993586 53.756 2 0.11359955200423341 0.0020131654630280564 0.9438714419765777 ['ENST00000575955.1_1_17:4120189-4167236:-|nuORF', 'ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000570934.5_1_17:4098183-4145738:-|nuORF'] 40556 4255 HSSNVKVVL True NCI_RA007_Epitope_Rep3 981.5607295219299 981.55962993586 23.429 2 0.11359887213412134 0.0020131654630280564 0.9438714419765777 ['ENSG00000055483|ENST00000449938|USP36', 'USP36|p.K1086Nfs*25|1|0.3|ENSG00000055483|chr17:78798534-78798534|T/-|frameshift_variant', 'USP36|p.Q806Rfs*91|1|0.52|ENSG00000055483|chr17:78803778-78803778|T/-|frameshift_variant'] 104669 4963 STAAVGVLK True NCI_RA007_Epitope_Rep3 844.50181766348 844.50072993586 26.519 2 0.11359517149163041 0.0020131654630280564 0.9438714419765777 ['ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF'] 8905 17637 AVGGLGSIIRV True PC9_epitope_Rep6 1040.6342288153598 1040.63312993586 80.48 2 0.11359254414586391 0.0020131654630280564 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 4730 17722 ALDVANKIGII True PC9_epitope_Rep6 1125.6757592741699 1125.67466993586 80.802 2 0.11358805384344484 0.002036983990578949 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 127628 17552 VRDPRPWLL True PC9_epitope_Rep1 1150.66111226954 1150.65946490379 72.306 3 0.11358420665410807 0.002036983990578949 0.9438714419765777 ['ENST00000529462.5_1_8:145637924-145638077:-|nuORF', 'ENST00000527148.5_1_8:145635301-145638951:-|nuORF', 'nc|ENSG00000147804|Q6P5W5-2|SLC39A4', 'ENSG00000147804|ENST00000301305|SLC39A4'] 71025 13331 MESPFITSP True H1975_Epitope_Rep1 1007.46338354943 1007.46287496793 56.382 1 0.11357827243632655 0.002036983990578949 0.9438714419765777 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 30529 8879 GAIGSPVRL True H1975_Epitope_Rep3 868.51305105352 868.51194993586 39.154 2 0.11357824421782803 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant'] 76051 7660 NRLENDGATAL True PC9_epitope_Rep6 1172.5785644140399 1172.57746993586 38.786 2 0.11357724165809022 0.002036983990578949 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 35002 11133 GRAPGGLSL True PC9_epitope_Rep1 826.4661008611 826.4650099358599 47.708 2 0.1135765556974261 0.002036983990578949 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 85078 19543 QIPQVLNQV True PC9_epitope_Rep3 1037.58694426977 1037.58584993586 80.405 2 0.11357128154522371 0.002036983990578949 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 47549 23177 IYLTFPVAM True PC9_epitope_Rep3 1053.55689001145 1053.55578993586 94.42 2 0.11355763388627521 0.002036983990578949 0.9438714419765777 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 40177 13661 HRFPFSSAL True PC9_epitope_Rep6 1060.5454138109599 1060.5443099358602 64.33 2 0.11355668177796538 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 106505 12942 SVVPDVRSV True PC9_epitope_Rep1 956.52909504048 956.52798993586 54.653 2 0.11355646805650405 0.002036983990578949 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 40182 9157 HRFPTVAV True PC9_epitope_Rep4 925.5133854066898 925.5122899358599 42.815 2 0.11355175928101616 0.002036983990578949 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 105946 20798 SVLGAITSV True PC9_epitope_Rep1 845.48583324617 845.48528496793 84.825 1 0.11354653924169461 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 6306 5856 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 27.923 2 0.1135391962765344 0.002036983990578949 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 1046 7843 AEAIKAWTA True H1975_Epitope_Rep2 959.5076313199099 959.50652993586 35.117 2 0.11353454460553844 0.002036983990578949 0.9438714419765777 ['ENST00000565493.1_1_20:34638316-34638640:-|nuORF'] 9011 15164 AVIDVGINRV True PC9_epitope_Rep4 1054.61349337078 1054.6123899358602 66.255 2 0.11352920671922632 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 139398 8771 YTEEDAVSY True H1975_Epitope_Rep1 1075.43458551895 1075.43348993586 38.668 2 0.11352245764336881 0.002036983990578949 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 28659 13968 FSSPHLVQV True PC9_epitope_Rep4 1012.5341804209198 1012.53308993586 61.632 2 0.11352083471846704 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 85181 16513 QKDSLVINI True PC9_epitope_Rep4 1028.5866099165999 1028.58550993586 71.49 2 0.11351581425436055 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 8622 8567 AVALPLQTK True NCI_RA007_Epitope_Rep1 939.57531695691 939.57420993586 37.325 2 0.11351566440370331 0.002036983990578949 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 15203 13231 EAFNMIDQNR True PC9_epitope_Rep1 1236.5557207944798 1236.55462993586 55.759 2 0.11351322440715102 0.002036983990578949 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 106365 5530 SVSNVVITK True NCI_RA007_Epitope_Rep4 945.54949613189 945.54838993586 27.867 2 0.11351291282664265 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 16212 13427 EEFPSFGA True H1975_Epitope_Rep3 882.3759484440199 882.3753949679301 56.917 1 0.11350479615713935 0.002036983990578949 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 86211 8537 QPVSGTQVV True PC9_epitope_Rep4 913.48689587533 913.48578993586 40.316 2 0.11350040218457239 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 21131 20293 ERDRLILFL True PC9_epitope_Rep2 1173.6869926642098 1173.6853349037901 83.479 3 0.11348351212575572 0.002036983990578949 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 40038 6728 HQVPAVSSV True PC9_epitope_Rep2 922.4872302285 922.48612993586 31.289 2 0.11347568732031375 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 7797 6310 ASWGGTIEK True NCI_RA007_Epitope_Rep5 947.47124581119 947.47014993586 30.95 2 0.11347160887828349 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1-MLLT3|1|fusion', 'NBEAL1|p.R1792Gfs*10|1|0.22|ENSG00000144426|chr2:203149143-203149143|T/-|frameshift_variant'] 139790 20614 YVDDFGVSV True PC9_epitope_Rep3 999.4549270407099 999.4543749679301 84.56 1 0.11347013021365544 0.002036983990578949 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 2091 11940 AELNAQIITA True H1975_Epitope_Rep1 1042.56587447202 1042.56537496793 50.931 1 0.11346858008987046 0.002036983990578949 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 119812 7330 VEVILQHSA True NCI_RA007_Epitope_Rep4 994.5447451046201 994.54364993586 34.834 2 0.11346568383061982 0.002036983990578949 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'ENST00000472714.1_1_7:107569804-107570089:-|nuORF'] 17708 17714 EHSLVIDTL True PC9_epitope_Rep1 1025.53932537101 1025.5387749679298 72.932 1 0.11346200107806766 0.002036983990578949 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 117405 8499 VADKIQLINN True H1975_Epitope_Rep3 1126.63462273818 1126.63352993586 37.676 2 0.11345994464143902 0.002036983990578949 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 136574 7530 YHTDTTVKF True PC9_epitope_Rep4 1110.53457434374 1110.53346993586 36.332 2 0.11345457030480291 0.002036983990578949 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 133286 15757 WELLPSAAA True H1975_Epitope_Rep2 956.4967322830398 956.49618496793 65.784 1 0.11344988602379821 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'ENST00000487089.1_1_6:31603319-31603595:+|nuORF', 'ENST00000487839.1_1_6:31603188-31603595:+|nuORF'] 25541 7835 FEQKGPVYVA True H1975_Epitope_Rep2 1136.5866099165999 1136.58550993586 35.086 2 0.11344261394183161 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3'] 133534 16549 WHHTFYNEL True PC9_epitope_Rep5 1245.55670677065 1245.55560993586 68.66 2 0.11344152629988837 0.002036983990578949 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 24465 17206 FAIDPHLLL True H1975_Epitope_Rep2 1037.59096702105 1037.5898699358602 71.473 2 0.11343906688067903 0.002036983990578949 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 131785 12141 VYAILTHGI True NCI_RA007_Epitope_Rep4 985.5596668927699 985.55856993586 53.696 2 0.11343684195587937 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 108795 6901 TEQEVAQVASA True H1975_Epitope_Rep1 1131.54078192299 1131.53968993586 31.584 2 0.11343406093462499 0.002036983990578949 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 108941 5267 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.43850993586 25.327 2 0.11343213988752028 0.002036983990578949 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 40488 13645 HSEQVFAL True PC9_epitope_Rep4 929.4606811274899 929.45958993586 60.378 2 0.11343030782777344 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 48406 4104 KEDKPPLAP True H1975_Epitope_Rep3 993.5494961318898 993.54838993586 20.91 2 0.11342867226623109 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 17310 11935 EHDPQYAVI True PC9_epitope_Rep2 1070.50327421546 1070.5021699358601 51.23 2 0.1134235080043292 0.002036983990578949 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 14157 15311 DSLLQDGEF True H1975_Epitope_Rep1 1022.4556553166999 1022.45507496793 64.162 1 0.11341364062207973 0.002036983990578949 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 2524 10571 AEQTLSQLP True H1975_Epitope_Rep2 985.5080252427299 985.50692993586 45.684 2 0.11340763684575446 0.002036983990578949 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 97805 13311 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 56.476 2 0.113406899495217 0.002036983990578949 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 40573 2628 HSVIQLAR True NCI_RA007_Epitope_Rep3 922.5348491272599 922.53374993586 14.798 2 0.11340345257935246 0.002036983990578949 0.9438714419765777 ['ENSG00000141570|ENST00000269385|CBX8'] 65111 10333 LSDPGSGLY True H1975_Epitope_Rep1 907.4287122928699 907.42816496793 44.693 1 0.11340336569642893 0.002036983990578949 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 139138 6843 YSQNQQSY True PC9_epitope_Rep1 1016.4199385143199 1016.41884993586 31.127 2 0.11339903717272999 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 92435 16128 RQVAFDFTKV True PC9_epitope_Rep1 1209.65060715549 1209.64897490379 66.853 3 0.1133969857359631 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'PICALM|p.N190Mfs*3|2|0.23|ENSG00000073921|chr11:86012370-86012370|T/-|frameshift_variant', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 96752 8835 SEQLDQPISA True H1975_Epitope_Rep2 1086.51931820242 1086.51822993586 38.951 2 0.11339557967195306 0.002036983990578949 0.9438714419765777 ['ENST00000462438.1_1_20:55948707-55953152:+|nuORF', 'ENSG00000101146|ENST00000395841|RAE1'] 95657 12372 SAVPPGTSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 52.586 2 0.11338696121337975 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 126357 11989 VPLAIVNKA True PC9_epitope_Rep1 923.58040233735 923.57930993586 50.979 2 0.11337672401400314 0.002036983990578949 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 19356 6141 ELNITAAK True NCI_RA007_Epitope_Rep1 858.4810822188999 858.47998993586 27.924 2 0.11337061836393743 0.002036983990578949 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 96857 9387 SESPPAELP True H1975_Epitope_Rep2 925.43927697657 925.43816993586 41.069 2 0.11336866014987791 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 98765 7862 SISETYDLK True NCI_RA007_Epitope_Rep1 1054.5182555732597 1054.51714993586 34.573 2 0.11335834123978938 0.002036983990578949 0.9438714419765777 ['CON__P34955'] 14066 12043 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 51.403 2 0.1133513256266929 0.002036983990578949 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 89465 5567 REQEITAVQA True H1975_Epitope_Rep3 1143.58840082175 1143.58787496793 26.455 1 0.11334262232468238 0.002036983990578949 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 27680 14356 FQDENHLYL True PC9_epitope_Rep6 1177.54038800017 1177.53928993586 67.117 2 0.11332765995910224 0.002036983990578949 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 64197 8527 LQIDNARLA True NCI_RA007_Epitope_Rep5 1012.5665431783599 1012.56544993586 39.483 2 0.11332409462951996 0.002036983990578949 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000520711.1_1_8:41368829-41369321:+|nuORF', 'ENST00000527480.1_1_11:6015523-6015940:-|nuORF', 'ENST00000425692.6_1_17:16723399-16724021:-|nuORF', 'ENST00000417510.5_1_17:16723399-16724042:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 96292 7658 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 34.41 1 0.11331872601777547 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 103730 12521 SREPSQVIF True PC9_epitope_Rep2 1061.5505587610498 1061.54946993586 53.469 2 0.11331826250552224 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000134086|P40337-3|VHL', 'nc|ENSG00000134086|P40337-2|VHL', 'ENSG00000134086|ENST00000256474|VHL'] 96448 11105 SEILYSAPP True H1975_Epitope_Rep2 975.49131254943 975.4907649679301 47.75 1 0.11331513399784233 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 7919 13083 ATDDITELY True H1975_Epitope_Rep2 1039.47097102767 1039.47037496793 55.447 1 0.1133148641394408 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 43908 10787 ILDQKINEV True PC9_epitope_Rep4 1070.5971746003 1070.5960699358602 49.251 2 0.11331449535754196 0.002036983990578949 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 88964 2886 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 15.253 2 0.11330928080272333 0.002036983990578949 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 35820 17454 GTYTGFIKV True PC9_epitope_Rep3 984.5280324113198 984.52692993586 72.312 2 0.11330400649885625 0.002036983990578949 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 102858 10765 SQHGVIIQL True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 48.257 2 0.1133014466037762 0.002036983990578949 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 103191 12105 SQPPVQVSV True PC9_epitope_Rep6 939.5025459394699 939.50144993586 57.897 2 0.11329807911147075 0.002036983990578949 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 104217 9251 SSDNIM[Oxidation]VQY True H1975_Epitope_Rep1 1071.45427579815 1071.45377496793 40.495 1 0.11329742505654536 0.002036983990578949 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 72337 12819 MTDGGLNLY True H1975_Epitope_Rep3 982.44298245802 982.44243496793 54.527 1 0.11329500284123256 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3'] 89833 21623 RFLAATFLL True PC9_epitope_Rep2 1050.6226015025 1050.62150993586 88.647 2 0.11329284254199384 0.002036983990578949 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 84256 4542 QEVSRIPAS True NCI_RA007_Epitope_Rep4 985.5192586327698 985.51816993586 23.873 2 0.11329284234225942 0.002036983990578949 0.9438714419765777 ['ENSG00000213923|ENST00000396832|CSNK1E', 'ENST00000494610.1_1_22:38690075-38690477:-|nuORF'] 125697 9315 VNDGDMRLAD True PC9_epitope_Rep1 1104.48697252832 1104.4858699358601 40.686 2 0.11329188189365742 0.002036983990578949 0.9438714419765777 ['ENSG00000108679|ENST00000262776|LGALS3BP'] 102350 5994 SPVFTSRSAA True PC9_epitope_Rep2 1021.51925863277 1021.51816993586 28.444 2 0.11326572428713283 0.002036983990578949 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 38419 4840 HGRAEIEAL True NCI_RA007_Epitope_Rep3 994.5195929859399 994.51848993586 26.021 2 0.1132647042567089 0.002036983990578949 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 31500 5815 GEEQPPQPP True H1975_Epitope_Rep2 977.4454249861699 977.44432993586 27.358 2 0.11325579625140617 0.002036983990578949 0.9438714419765777 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 102642 16458 SQDFPGSNL True PC9_epitope_Rep1 963.42977492203 963.42866993586 68.131 2 0.11325476797016658 0.002036983990578949 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 139820 6294 YVDGVEVH True NCI_RA007_Epitope_Rep2 916.42904664604 916.4279499358599 29.088 2 0.11325407102741374 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 125980 10355 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.4914349679301 44.713 1 0.11325205535720059 0.002036983990578949 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 45383 8402 ISDPGVQGY True H1975_Epitope_Rep2 934.43961132974 934.4390649679301 37.271 1 0.113251986845743 0.002036983990578949 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 91837 13903 RPNDIMAEV True PC9_epitope_Rep5 1043.50697969691 1043.50588993586 58.498 2 0.11325063651137698 0.002036983990578949 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 23951 10216 EYNSDLHQF True PC9_epitope_Rep6 1151.4883524273098 1151.48724993586 49.944 2 0.11325036432017609 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 90160 15994 RHDDYLVML True PC9_epitope_Rep6 1160.5648289262 1160.56318490379 73.831 3 0.1132476593101794 0.002036983990578949 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 104389 3640 SSGPSTPLK True NCI_RA007_Epitope_Rep4 872.46034677432 872.45924993586 20.082 2 0.11323738884998284 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5'] 106902 24508 SYIPLFPQLYF True PC9_epitope_Rep1 1386.72237511342 1386.7212699358602 99.113 2 0.11323558222646381 0.002036983990578949 0.9438714419765777 ['ENSG00000165996|ENST00000361271|HACD1'] 136083 11851 YGAQPSATL True PC9_epitope_Rep5 906.44469671018 906.44358993586 50.583 2 0.11322974411348732 0.002036983990578949 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14'] 102691 2538 SQDPGTHVV True PC9_epitope_Rep6 938.4457593393399 938.44466993586 14.691 2 0.11322720864915069 0.002036983990578949 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 110739 19882 TKFGGIVVL True PC9_epitope_Rep3 932.5695033004798 932.56840993586 81.715 2 0.11322225684220832 0.002036983990578949 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 21629 11554 ERTGNIPAL True PC9_epitope_Rep5 969.5243440132098 969.52324993586 49.438 2 0.11322147375596481 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 29720 16910 FVPIKVEQI True PC9_epitope_Rep4 1071.63283183303 1071.6317299358602 73.03 2 0.11322008889837062 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 134881 12861 YADGESFL True H1975_Epitope_Rep2 900.3865131277199 900.38596496793 54.58 1 0.11320350114160443 0.002036983990578949 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 61970 11109 LLLPGELAK True NCI_RA007_Epitope_Rep5 952.5957180483199 952.59462993586 49.366 2 0.11320190842444618 0.002036983990578949 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 41914 17225 IEAFTPLLA True H1975_Epitope_Rep2 973.5484335027298 973.54732993586 71.545 2 0.11319728610491982 0.002036983990578949 0.9438714419765777 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF', 'nc|ENSG00000014138|Q14181-2|POLA2'] 26060 10553 FHDPDSAVV True PC9_epitope_Rep1 985.4505103666099 985.44940993586 45.482 2 0.11319504947346204 0.002036983990578949 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 21261 8875 ERIKGYAL True PC9_epitope_Rep5 948.5392658013599 948.53816993586 39.082 2 0.11319032484452181 0.002036983990578949 0.9438714419765777 ['ENSG00000104611|ENST00000265807|SH2D4A', 'nc|ENSG00000104611|Q9H788-2|SH2D4A'] 86762 12728 QRLPEPATL True PC9_epitope_Rep1 1023.5712942056299 1023.57018993586 53.832 2 0.11318206826660515 0.002036983990578949 0.9438714419765777 ['ENSG00000107281|ENST00000371601|NPDC1'] 120443 9784 VFTSRSAAF True PC9_epitope_Rep4 984.5028802926398 984.50178993586 45.276 2 0.11317822051274772 0.002036983990578949 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 86698 12457 QRIDEFESM True PC9_epitope_Rep6 1153.5073736197298 1153.50626993586 59.341 2 0.11317612305654606 0.002036983990578949 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 90426 11556 RIPTAGIYGA True PC9_epitope_Rep4 1017.5607295219298 1017.55962993586 52.211 2 0.11316646718879282 0.002036983990578949 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 60048 13923 LHSDLEYTV True PC9_epitope_Rep5 1075.51858992643 1075.51748993586 58.575 2 0.11316422527080366 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000574894.1_1_16:16367711-16371421:+|nuORF'] 7332 5955 ARSTDQTVL True PC9_epitope_Rep5 989.51417325233 989.51306993586 27.901 2 0.1131568108368893 0.002036983990578949 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 67247 17381 LTDLVDDNYFY True H1975_Epitope_Rep2 1376.6136125100802 1376.6130749679298 72.15 1 0.11314924011635626 0.002036983990578949 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 729 15397 AAVPGKTFVNI True PC9_epitope_Rep2 1115.63389446219 1115.63278993586 64.506 2 0.11314847123388443 0.002036983990578949 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 138473 7966 YRGGSISV True PC9_epitope_Rep5 837.43446637965 837.43336993586 35.582 2 0.11314807599321934 0.002036983990578949 0.9438714419765777 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1'] 31949 5924 GESDRVFAT True H1975_Epitope_Rep2 980.45632402304 980.45522993586 27.771 2 0.11314807185465885 0.002036983990578949 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 106537 21618 SVVSQFITV True PC9_epitope_Rep5 978.5385970950199 978.53750993586 88.194 2 0.11314505385947674 0.002036983990578949 0.9438714419765777 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1'] 83089 22885 PYNDYFEYF True PC9_epitope_Rep1 1256.50260550912 1256.50207496793 92.822 1 0.11314071503858165 0.002036983990578949 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 4149 17750 AHVTLLTSL True PC9_epitope_Rep2 953.5545815123301 953.55348993586 73.557 2 0.1131379823720485 0.002036983990578949 0.9438714419765777 ['ENSG00000087510|ENST00000201031|TFAP2C', 'nc|ENSG00000087510|Q92754-2|TFAP2C'] 76078 7246 NRMDGTYAC True PC9_epitope_Rep5 1029.4008003762099 1029.39970993586 32.835 2 0.11313528850267333 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 110460 15469 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.53308993586 64.512 2 0.11312950449482352 0.002036983990578949 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 102947 12032 SQIPAQPSV True PC9_epitope_Rep1 925.48689587533 925.4863449679301 51.142 1 0.11312824368708835 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 126540 17823 VPPAVTGITFL True H1975_Epitope_Rep3 1113.64339651673 1113.6422899358602 74.571 2 0.11312718937559467 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 8187 9275 ATGENLPRV True PC9_epitope_Rep5 955.5086939490699 955.50758993586 40.625 2 0.1131231241193976 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 43394 18966 IHSDVVFVV True PC9_epitope_Rep5 1013.55458151233 1013.55348993586 77.977 2 0.11312098833754454 0.002036983990578949 0.9438714419765777 ['ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1', 'ENST00000464431.1_1_3:127395028-127395444:+|nuORF', 'ENST00000491633.5_1_3:127394949-127398855:+|nuORF'] 106432 6369 SVTSKGVVTC True PC9_epitope_Rep5 979.5008316873099 979.49972993586 29.476 2 0.11311565557266322 0.002036983990578949 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 13891 7576 DRDPASGTAL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 34.089 2 0.11311295255069799 0.002036983990578949 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 1280 5401 AEDRQVSITA True H1975_Epitope_Rep3 1088.5462016566 1088.5451099358602 25.84 2 0.11311255868047367 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 72239 15047 MRYVASYL True PC9_epitope_Rep4 1001.5004377644898 1001.49934993586 65.81 2 0.11311004523542205 0.002036983990578949 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 119373 7519 VENPGGYVA True H1975_Epitope_Rep3 904.42904664604 904.4284949679301 33.902 1 0.11310925075954582 0.002036983990578949 0.9438714419765777 ['TFRC-TCTEX1D2|1|fusion', 'ENSG00000072274|ENST00000360110|TFRC'] 127024 6560 VPYGVGKAA True PC9_epitope_Rep5 860.4756029156398 860.4745099358599 30.203 2 0.1130920617243474 0.002036983990578949 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 5863 16710 APGNPVLAV True PC9_epitope_Rep1 836.4756029156399 836.4745099358599 69.103 2 0.11308277735371441 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 58137 7655 LESELIKSA True H1975_Epitope_Rep2 988.5440763982799 988.54296993586 34.399 2 0.11307532282882549 0.002036983990578949 0.9438714419765777 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion'] 6342 6541 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 30.133 2 0.11307292903942114 0.002036983990578949 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 12384 10688 DKDEIPTISSY True H1975_Epitope_Rep2 1266.59796244594 1266.59686993586 46.135 2 0.11307000397954875 0.002036983990578949 0.9438714419765777 ['ENSG00000227729|ENST00000557640|RD3L'] 52357 11183 KPFKEFVEA True PC9_epitope_Rep5 1093.5807962601698 1093.5796899358602 48.004 2 0.11306811515692035 0.002036983990578949 0.9438714419765777 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 102319 5500 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 26.549 2 0.11303877794746005 0.0020684168655529037 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 83759 12263 QEDVRLIGL True H1975_Epitope_Rep2 1041.5818588893299 1041.5807699358602 52.253 2 0.11303782035644339 0.0020684168655529037 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 128397 9648 VSDTVVEPY True H1975_Epitope_Rep1 1007.4811417885498 1007.48057496793 42.039 1 0.11303547202515297 0.0020684168655529037 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8', 'ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 140615 13781 YYNKVSTVF True PC9_epitope_Rep2 1119.5600608155898 1119.5589699358602 58.292 2 0.11303544167845377 0.0020684168655529037 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 31474 10246 GEELAGAIAA True H1975_Epitope_Rep2 900.4552613938798 900.45416993586 44.417 2 0.11303537221475285 0.0020684168655529037 0.9438714419765777 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 138267 16418 YQVGVHYEL True PC9_epitope_Rep5 1106.5396597241802 1106.53856993586 68.152 2 0.11303128200462231 0.0020684168655529037 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 35555 14828 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.5172549679301 62.3 1 0.11302299904457055 0.002099236641221374 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 38082 10631 HENIIVAIA True H1975_Epitope_Rep3 978.5498304850599 978.54872993586 45.964 2 0.1130229304705926 0.002099236641221374 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 101906 11841 SPLLLQAKA True PC9_epitope_Rep2 939.5753169569099 939.57420993586 50.875 2 0.11300381706344349 0.002099236641221374 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 102427 11468 SPVYVGRVV True PC9_epitope_Rep2 974.5549158654999 974.55380993586 49.43 2 0.11299104076838903 0.002099236641221374 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 84128 11700 QEQLWPHMEA True H1975_Epitope_Rep2 1267.56555720219 1267.56444993586 50.079 2 0.11298592904900735 0.002099236641221374 0.9438714419765777 ['nc|ENSG00000105655|Q9NPH2-2|ISYNA1', 'ENST00000577820.5_1_19:18545725-18548921:-|nuORF', 'nc|ENSG00000105655|Q9NPH2-3|ISYNA1', 'ENSG00000105655|ENST00000338128|ISYNA1'] 25930 9282 FGPGVAFR True H1975_Epitope_Rep3 849.4497225209699 849.44862993586 40.697 2 0.11298174007378871 0.002099236641221374 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 17781 15143 EHVPGADIL True PC9_epitope_Rep1 949.4868958753299 949.48578993586 63.07 2 0.11297937466273571 0.002099236641221374 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 43743 19813 IITKDLFQV True PC9_epitope_Rep3 1075.62774645259 1075.62664993586 81.443 2 0.11297830150522464 0.002099236641221374 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 132241 18572 VYKTIMEQF True PC9_epitope_Rep1 1157.57908200801 1157.5779899358602 76.224 2 0.11297319382571448 0.002099236641221374 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 25299 9156 FEEGLETTA True H1975_Epitope_Rep3 995.4447562798299 995.4442049679301 40.208 1 0.112966749511548 0.002099236641221374 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 101662 20279 SPFQFTVGP True PC9_epitope_Rep4 978.4810822188999 978.48053496793 86.145 1 0.11296622649232381 0.002099236641221374 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 28058 19656 FRDFIPVVL True PC9_epitope_Rep6 1104.6331661861998 1104.63206993586 88.266 2 0.11296043286232668 0.002099236641221374 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 71990 23091 MQAPLLIAL True PC9_epitope_Rep5 968.5728744287599 968.5723249679301 93.806 1 0.11295810250300424 0.002099236641221374 0.9438714419765777 ['ENSG00000196743|ENST00000357164|GM2A'] 20970 20308 ERADLIAYL True PC9_epitope_Rep2 1062.57095985246 1062.5698699358602 83.538 2 0.11295697187278138 0.002099236641221374 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 77627 13841 NYVQAVEEF True NCI_RA007_Epitope_Rep4 1097.5029398622898 1097.50184993586 60.496 2 0.11294978099493122 0.002099236641221374 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 1009 6390 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.41744993586 29.503 2 0.1129337018825649 0.0021300947415273095 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 113348 5424 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.54912993586 28.346 2 0.11293090556998533 0.0021300947415273095 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 106141 17562 SVPDPELIKTV True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 72.345 2 0.11292827064349274 0.0021300947415273095 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 47107 10295 IVVVTAGVR True PC9_epitope_Rep5 912.5756513100798 912.57454993586 44.587 2 0.1129246874531734 0.0021300947415273095 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 114818 19850 TTDFIFNLY True H1975_Epitope_Rep2 1132.54407639828 1132.54357496793 82.336 1 0.11290908763336512 0.0021300947415273095 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 42083 15119 IEEIEGLISA True H1975_Epitope_Rep3 1072.56520576568 1072.5641099358602 63.554 2 0.1129008786643091 0.0021300947415273095 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 26076 11827 FHEGDAYVV True PC9_epitope_Rep2 1035.4661604307498 1035.4650699358601 50.823 2 0.11289823306262044 0.0021300947415273095 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 103698 9757 SRDTTMYAV True PC9_epitope_Rep1 1042.47534521546 1042.4742499358601 42.389 2 0.11289686203074066 0.0021300947415273095 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA'] 54101 20702 KYMDVQFDF True PC9_epitope_Rep1 1191.52704643515 1191.5259499358601 84.456 2 0.11289592433345605 0.0021300947415273095 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 84655 6158 QHEGGVQEL True PC9_epitope_Rep1 995.46722305991 995.46612993586 28.501 2 0.11289474089600468 0.0021300947415273095 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 91567 16967 RPALPVSYLQA True PC9_epitope_Rep4 1213.68190728377 1213.68080993586 73.254 2 0.11288097994565109 0.0021300947415273095 0.9438714419765777 ['ENSG00000167615|ENST00000326764|LENG8'] 84025 5642 QENTQTPTV True H1975_Epitope_Rep3 1016.47745339044 1016.47634993586 26.737 2 0.11286779582918124 0.0021300947415273095 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 1938 8873 AEIPEEHIP True H1975_Epitope_Rep3 1033.50802524273 1033.5069299358602 39.132 2 0.11285714965470435 0.0021300947415273095 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 3925 13713 AHDPISPVL True PC9_epitope_Rep2 947.50763131991 947.50652993586 58.037 2 0.11285566523144158 0.0021300947415273095 0.9438714419765777 ['ENSG00000116199|ENST00000263733|FAM20B'] 17621 6222 EHNELQQKL True PC9_epitope_Rep5 1137.57783613805 1137.57619490379 28.912 3 0.11284877424730758 0.002138566531433783 0.9438714419765777 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'nc|ENSG00000100592|Q9Y4D1-3|DAAM1'] 135506 13868 YEDSGIPLP True H1975_Epitope_Rep1 989.4705771048499 989.47002496793 58.492 1 0.11284686541099857 0.002138566531433783 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 94853 10328 RYMPQNPHII True PC9_epitope_Rep4 1267.6495616096697 1267.64791490379 47.417 3 0.11284589011860936 0.002138566531433783 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 117 19829 AAAWPLLL True H1975_Epitope_Rep1 853.5061747679299 853.5056249679301 82.52 1 0.11284318973366732 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 76853 22556 NVIDYIDTI True PC9_epitope_Rep1 1064.53899101784 1064.5378899358602 91.566 2 0.11284244020417204 0.002138566531433783 0.9438714419765777 ['ENSG00000156017|ENST00000376834|CARNMT1'] 11966 15261 DHTLGNII True PC9_epitope_Rep4 881.46068112749 881.45958993586 66.632 2 0.11284223746981516 0.002138566531433783 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 72052 13833 MRAFADAL True PC9_epitope_Rep4 893.4429228883698 893.44182993586 61.106 2 0.11283984833590936 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 138170 7916 YQNQEIHNL True PC9_epitope_Rep4 1157.5465360097699 1157.54542993586 37.879 2 0.11282698348860057 0.002138566531433783 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000456732.2_10:48190054-48195746:+|nuORF'] 2582 7510 AESDHMAIP True H1975_Epitope_Rep2 969.42258136661 969.42148993586 33.837 2 0.11282519205843686 0.002138566531433783 0.9438714419765777 ['ENSG00000160294|ENST00000291688|MCM3AP', 'MCM3AP|p.E650Rfs*6|1|0.3|ENSG00000160294|chr21:46275236-46275236|C/-|frameshift_variant'] 128393 8375 VSDSKQFTYY True H1975_Epitope_Rep3 1236.56626839484 1236.56516993586 37.198 2 0.11281939097747126 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 91953 8429 RPPPIGAEV True PC9_epitope_Rep2 934.5236157372199 934.52250993586 37.792 2 0.1128153316160053 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 38716 7420 HHSNLIAGM True PC9_epitope_Rep4 978.47053461854 978.46942993586 35.889 2 0.11281519484093058 0.002138566531433783 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 39334 3498 HLSLSHNPEQK True NCI_RA007_Epitope_Rep2 1288.65239806064 1288.65076490379 18.258 3 0.112808525044604 0.002138566531433783 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 6682 7147 AQAPDLQRV True PC9_epitope_Rep6 996.5352430500799 996.53414993586 36.564 2 0.11280350233876381 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 39369 13256 HLVDEPQNLIK True PC9_epitope_Rep3 1304.7088503076 1304.7077499358602 56.022 2 0.11279939690914569 0.002138566531433783 0.9438714419765777 ['CON__P02769'] 95057 12947 RYSEYAEEF True PC9_epitope_Rep2 1192.5036681382796 1192.50256993586 55.094 2 0.11279147866369343 0.002138566531433783 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6'] 139736 20357 YTYEFDFSKV True PC9_epitope_Rep2 1297.5866694862498 1297.5855699358601 83.726 2 0.11278877741688498 0.002138566531433783 0.9438714419765777 ['ENSG00000126814|ENST00000261249|TRMT5'] 1152 16880 AEAQLWWAA True H1975_Epitope_Rep2 1044.50288029264 1044.5023749679299 70.175 1 0.11278615979455474 0.002138566531433783 0.9438714419765777 ['ENSG00000159079|ENST00000290155|CFAP298', 'ENST00000483315.1_1_21:33975401-33976611:-|nuORF'] 26114 19583 FHFTTPAL True PC9_epitope_Rep3 932.4756029156399 932.4745099358599 80.562 2 0.11278041625426033 0.002138566531433783 0.9438714419765777 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2', 'ENST00000565532.5_1_16:66762088-66770076:-|nuORF'] 4248 20789 AIIDGKIFCV True PC9_epitope_Rep5 1077.58925276889 1077.5881499358602 85.016 2 0.11276978786533522 0.002138566531433783 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF'] 8482 8544 ATVAVPLVGK True NCI_RA007_Epitope_Rep3 953.5909670210499 953.58986993586 40.68 2 0.1127629917424085 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 7670 4253 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep4 990.4618036426001 990.46070993586 22.751 2 0.1127620754224484 0.002138566531433783 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 52600 16113 KQADPFASL True PC9_epitope_Rep1 975.5025459394699 975.50144993586 66.795 2 0.11275838085907008 0.002138566531433783 0.9438714419765777 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 107948 20366 TAYDNFVEL True PC9_epitope_Rep4 1070.49204082542 1070.49094993586 86.482 2 0.11275835760104093 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 70950 16054 MENEFLLPP True H1975_Epitope_Rep2 1088.5212327787199 1088.52012993586 66.954 2 0.11275808631541372 0.002138566531433783 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 21390 12450 ERMPEQIRL True PC9_epitope_Rep1 1170.61792712822 1170.61682993586 52.754 2 0.11275631274924079 0.002138566531433783 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 67284 5687 LTDPDGALAK True H1975_Epitope_Rep2 999.5236753068699 999.52256993586 26.873 2 0.11275571168100132 0.002138566531433783 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 75672 16093 NQTPVTLQV True PC9_epitope_Rep2 998.5396597241801 998.53856993586 67.158 2 0.11274760348397245 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 120262 16750 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.50677496793 69.256 1 0.11274545475398753 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 99367 10881 SLDVGGPLRY True H1975_Epitope_Rep3 1075.56620882519 1075.5651099358602 46.936 2 0.1127384415191571 0.002138566531433783 0.9438714419765777 ['ENSG00000176894|ENST00000317479|PXMP2'] 45138 21409 IQYIPTELDQV True PC9_epitope_Rep1 1317.68163250025 1317.68052993586 87.186 2 0.11273558275230976 0.002138566531433783 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 135484 5228 YEDGARIEA True H1975_Epitope_Rep2 1022.4668887067398 1022.46578993586 25.177 2 0.11273108061569882 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000247077|Q96HS1-2|PGAM5', 'ENSG00000247077|ENST00000498926|PGAM5'] 138012 22310 YQDELTALL True PC9_epitope_Rep1 1064.5389910178399 1064.5378899358602 90.627 2 0.11272672415658504 0.002138566531433783 0.9438714419765777 ['ENSG00000129474|ENST00000262713|AJUBA', 'AJUBA|p.G32Rfs*10|1|0.57|ENSG00000129474|chr14:22982162-22982173|CTTGCCCGGCCC/G|frameshift_variant'] 138326 16623 YRAPEVLL True PC9_epitope_Rep3 959.5440168286299 959.54290993586 69.076 2 0.11271996744881506 0.002138566531433783 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 138545 12491 YRMDGHIQL True PC9_epitope_Rep2 1131.5495132152298 1131.54787490379 53.355 3 0.11271862325074714 0.002138566531433783 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 47686 15146 IYPTTYVQF True NCI_RA007_Epitope_Rep4 1130.56481184286 1130.56370993586 65.839 2 0.11271513812883632 0.002138566531433783 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 132974 13106 VYVDLGGSHVF True NCI_RA007_Epitope_Rep5 1191.5924235730301 1191.5913299358601 57.092 2 0.11270174786891385 0.002138566531433783 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 115147 6531 TVADKIHSV True PC9_epitope_Rep5 968.52909504048 968.52798993586 30.094 2 0.11270158983762109 0.002138566531433783 0.9438714419765777 ['ENSG00000276023|ENST00000617516|DUSP14'] 75129 12806 NMYGKVVTV True PC9_epitope_Rep1 1009.52665251233 1009.52554993586 54.132 2 0.11269850079707218 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 7539 2606 ASFDKAKLK True NCI_RA007_Epitope_Rep5 1006.58113061334 1006.58002993586 14.732 2 0.11269403869620823 0.002138566531433783 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 9304 11795 AVSDGVIKV True PC9_epitope_Rep3 886.5123823471799 886.51128993586 50.385 2 0.11269387705146658 0.002138566531433783 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 17182 6859 EHAGGEVEL True PC9_epitope_Rep4 939.42977492203 939.42866993586 33.602 2 0.11269314867414114 0.002138566531433783 0.9438714419765777 ['ENSG00000218891|ENST00000325421|ZNF579'] 8973 11125 AVHDSFVAV True PC9_epitope_Rep4 943.4763311916299 943.4752299358599 50.569 2 0.11269092235810597 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 115826 12745 TVMDSKIVQV True PC9_epitope_Rep6 1118.60054572858 1118.59944993586 60.511 2 0.11268174262070992 0.002138566531433783 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 30100 19673 FYPPHPDYTW True PC9_epitope_Rep3 1321.5767735088898 1321.57566993586 80.906 2 0.11267977976913086 0.002138566531433783 0.9438714419765777 ['ENSG00000130309|ENST00000252599|COLGALT1'] 39386 17281 HLVPEVPTV True PC9_epitope_Rep1 989.55458151233 989.55348993586 71.288 2 0.11267874125575852 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 97330 11043 SFVLNLGK True H1975_Epitope_Rep3 876.5069030439199 876.50580993586 47.566 2 0.1126741207329759 0.002138566531433783 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 21695 9418 ERYKEVAEL True PC9_epitope_Rep1 1135.5873381925899 1135.58569490379 41.085 3 0.11267179196665383 0.002138566531433783 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 138940 13963 YSEGESLFY True H1975_Epitope_Rep3 1093.46040634397 1093.4598749679299 59.025 1 0.11266972103281787 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 83728 10476 QEASEAYLV True H1975_Epitope_Rep2 1008.4763907612797 1008.47587496793 45.314 1 0.11266710260971746 0.002138566531433783 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'H3C13|p.G103R|1|0.12|ENSG00000183598|chr1:149813375-149813375|C/G|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 70523 15877 LYTEKFEEF True PC9_epitope_Rep6 1204.5652057656796 1204.5641099358602 73.35 2 0.11266670848391305 0.002138566531433783 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 139673 22240 YTTDFIYQL True PC9_epitope_Rep3 1162.55464108198 1162.55354993586 90.832 2 0.11265168191111166 0.002138566531433783 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 38687 4408 HHSDGSVSL True PC9_epitope_Rep3 937.42535824793 937.42426993586 22.057 2 0.11264693111915963 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 22996 6865 EVISDEHGID True NCI_RA007_Epitope_Rep2 1112.4985827578398 1112.4974899358601 31.319 2 0.11264115617502561 0.002138566531433783 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 4165 21105 AIAPIIAAV True PC9_epitope_Rep1 837.53238951577 837.53128993586 86.008 2 0.11263947801457812 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF'] 72093 18579 MRDPIRILV True PC9_epitope_Rep3 1111.65358436095 1111.65248993586 76.69 2 0.11263873716448942 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 96964 10209 SEVEVIHVP True NCI_RA007_Epitope_Rep5 1007.52876068731 1007.52766993586 45.901 2 0.11261890129067428 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 83211 12175 QAADLAYQL True NCI_RA007_Epitope_Rep4 991.4974605590301 991.49636993586 53.829 2 0.11261699825025992 0.002138566531433783 0.9438714419765777 ['ENSG00000147113|ENST00000398000|DIPK2B', 'DIPK2B|p.D262Y|1|0.55|ENSG00000147113|chrX:45154087-45154087|C/A|missense_variant'] 44062 20659 ILLKDILSV True PC9_epitope_Rep4 1012.65323292444 1012.65212993586 87.622 2 0.11261498609044254 0.002138566531433783 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant', 'ATM|p.Q1116Sfs*10|1|0.39|ENSG00000149311|chr11:108279550-108279550|T/-|frameshift_variant'] 140636 14464 YYPAKIEAI True PC9_epitope_Rep2 1066.5698972233 1066.5688099358601 60.907 2 0.11261264475153118 0.002138566531433783 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.V175Sfs*48|1|0.38|ENSG00000129292|chr8:132803834-132803834|G/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 116939 16721 TYPENWRAF True PC9_epitope_Rep4 1182.5458077337798 1182.54470993586 72.286 2 0.11261172315409015 0.002138566531433783 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 127444 19529 VQSGLRILL True PC9_epitope_Rep5 997.6284151589299 997.62730993586 80.17 2 0.11259410810130582 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 39911 18425 HQLESILAM True PC9_epitope_Rep2 1040.5324661687598 1040.53136993586 76.203 2 0.11259105172743569 0.002138566531433783 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 130694 16304 VVDGFNVLY True H1975_Epitope_Rep2 1024.52294703088 1024.52184993586 67.932 2 0.11257892925442116 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000179889|Q6P996-2|PDXDC1', 'ENST00000570001.5_1_16:15069056-15125764:+|nuORF', 'nc|ENSG00000179889|Q6P996-3|PDXDC1', 'nc|ENSG00000179889|Q6P996-4|PDXDC1', 'nc|ENSG00000179889|Q6P996-5|PDXDC1', 'ENSG00000179889|ENST00000396410|PDXDC1'] 120586 11900 VGAGAPVYL True H1975_Epitope_Rep1 845.46470387877 845.4641549679301 50.774 1 0.11257114952317301 0.002138566531433783 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 38516 4296 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 23.559 2 0.11256560233555529 0.002138566531433783 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 116281 10921 TVVKAISGV True PC9_epitope_Rep5 872.53311779176 872.53202993586 46.997 2 0.11256411730645469 0.002138566531433783 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 115618 11670 TVISEDSVVKA True PC9_epitope_Rep5 1146.61321858726 1146.6121299358601 49.884 2 0.11256339786942564 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000102384|Q92674-2|CENPI', 'ENSG00000102384|ENST00000682095|CENPI'] 112565 7393 TPAKAIAAV True PC9_epitope_Rep5 840.5069030439199 840.50580993586 33.394 2 0.11255742629675895 0.002138566531433783 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant'] 56786 14400 LEATINELV True H1975_Epitope_Rep3 1000.5440763982799 1000.54357496793 60.743 1 0.11254908604606091 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 140899 20384 YYVGGEIVTI True PC9_epitope_Rep4 1112.57537652656 1112.5748749679299 86.552 1 0.1125481256896899 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 105418 7028 [Acetylation]-SVAGGEIR True H1975_Epitope_Rep3 829.42938131551 829.42828993586 31.996 2 0.11254776020344194 0.002138566531433783 0.9438714419765777 ['ENST00000565758.1_1_16:30441199-30441310:-|nuORF', 'ENSG00000179958|ENST00000319285|DCTPP1'] 38705 16190 HHSNILLTF True PC9_epitope_Rep2 1080.5716285588 1080.5705299358601 67.526 2 0.11254703321652049 0.002138566531433783 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 117016 16241 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.52387496793 67.608 1 0.1125454660342092 0.002138566531433783 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 114401 8499 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41837496793 37.646 1 0.11254021653986773 0.002138566531433783 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 88907 7034 REASDLQIAA True H1975_Epitope_Rep2 1072.5512870370399 1072.55018993586 31.981 2 0.11253776074551088 0.002138566531433783 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 9132 8192 AVLSSPLSH True NCI_RA007_Epitope_Rep4 909.49198125577 909.49088993586 38.298 2 0.11253681432027554 0.002138566531433783 0.9438714419765777 ['ENSG00000110799|ENST00000261405|VWF'] 96164 13179 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.4074249679301 55.789 1 0.1125353543582376 0.002138566531433783 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 103063 12086 SQLEEGKPGYL True PC9_epitope_Rep3 1219.6084675599898 1219.60736993586 51.531 2 0.1125347869884371 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 15786 12428 EDFSETLTR True PC9_epitope_Rep3 1096.50366813828 1096.50256993586 52.831 2 0.11252800726776668 0.002138566531433783 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 96406 5752 SEIDM[Oxidation]SVKA True H1975_Epitope_Rep1 994.46411220586 994.46300993586 27.195 2 0.11252515200246549 0.002138566531433783 0.9438714419765777 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 126600 5998 VPPPPPIAR True NCI_RA007_Epitope_Rep5 942.56508662638 942.56398993586 29.754 2 0.11252319280281557 0.002138566531433783 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 22398 15842 ETEVSFLDY True H1975_Epitope_Rep3 1101.4866210918099 1101.4860749679299 66.384 1 0.11252165055646855 0.002138566531433783 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 94761 14882 RYLPDTLLL True NCI_RA007_Epitope_Rep5 1102.63864548946 1102.63754993586 63.913 2 0.11252139362463712 0.002138566531433783 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 107274 20413 SYQKVIELF True PC9_epitope_Rep1 1125.6070110080097 1125.60647496793 83.331 1 0.11252057694523708 0.002138566531433783 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 1093 7745 AEAPPAYTP True H1975_Epitope_Rep2 915.4337976733101 915.43270993586 34.745 2 0.11251158435367169 0.002138566531433783 0.9438714419765777 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 41222 10488 IADRPLYL True H1975_Epitope_Rep2 959.54401682863 959.54290993586 45.36 2 0.11250406962214453 0.002138566531433783 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5'] 126985 13262 VPWGGAAA True PC9_epitope_Rep5 727.3653241906699 727.3647749679301 56.023 1 0.11249570767830008 0.002138566531433783 0.9438714419765777 ['ENSG00000258429|ENST00000288022|PDF'] 8055 14840 ATDYTFAMY True H1975_Epitope_Rep2 1081.44264810485 1081.4415499358602 62.24 2 0.11249106166538012 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'FOXP4-CCND3|5|fusion', 'FOXP4-CCND3|1|fusion', 'FOXP4-CCND3|3|fusion', 'FOXP4-CCND3|2|fusion', 'FOXP4-CCND3|4|fusion', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 45359 8480 ISDGKMQLY True H1975_Epitope_Rep3 1053.51648175145 1053.5153899358602 37.603 2 0.11248736517068217 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000198182|Q96SK3-3|ZNF607', 'ENSG00000198182|ENST00000355202|ZNF607'] 58913 8732 LFVGGIKED True NCI_RA007_Epitope_Rep3 976.5229470308799 976.52184993586 41.438 2 0.11248699247576263 0.002138566531433783 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 25562 8895 FESIIKEAA True H1975_Epitope_Rep1 1006.5335117145798 1006.53240993586 39.119 2 0.11248303240466379 0.002138566531433783 0.9438714419765777 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5', 'chrX:135885350-135888848|170|110.96|0.05|11.14|-|ENST00000611668|CT45A10,CT45A10', 'chrX:135881315-135882536|241|118.07|1.0|6.88|-|ENST00000617981|CT45A10,CT45A10', 'chrX:135781735-135785220|228|373.1|0.31|10.21|-|ENST00000487941|CT45A5,CT45A5', 'chrX:135779641-135781561|228|103.74|0.53|7.61|-|ENST00000617203|CT45A5,CT45A5'] 38845 14059 HIGDAVVI True PC9_epitope_Rep3 822.4599528515 822.45884993586 59.167 2 0.11247924787682077 0.002138566531433783 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 971 7193 AEAAPPLRP True H1975_Epitope_Rep3 920.50796567308 920.50686993586 32.643 2 0.11247886792373284 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 102356 6845 SPVFTSRSAA True PC9_epitope_Rep5 1021.51925863277 1021.51816993586 31.3 2 0.11247734857686917 0.002138566531433783 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 139789 20434 YVDDFGVSV True PC9_epitope_Rep2 999.4549270407099 999.45382993586 84.026 2 0.11247372750636346 0.002138566531433783 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 135809 13333 YEPPVQESV True PC9_epitope_Rep2 1046.49204082542 1046.49094993586 56.559 2 0.11247127467377428 0.002138566531433783 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 105509 17022 SVDETLRLVQA True PC9_epitope_Rep2 1229.66156576201 1229.6604699358602 70.725 2 0.11246625832951818 0.002138566531433783 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF', 'ENSG00000123131|ENST00000379341|PRDX4'] 39719 9973 HPVLLTEA True PC9_epitope_Rep2 878.4861675993401 878.48561496793 43.69 1 0.11245379965059941 0.002138566531433783 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'POTEF|p.E799K|1|0.23|ENSG00000196604|chr2:130075077-130075077|C/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 74283 7414 NIILEEGK True NCI_RA007_Epitope_Rep1 914.5072969667399 914.50618993586 32.835 2 0.11245313390519814 0.002138566531433783 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 52354 11231 KPFKEFVEA True PC9_epitope_Rep1 1093.5807962601698 1093.5796899358602 48.08 2 0.11244545197969567 0.002138566531433783 0.9438714419765777 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 13856 6065 DRAPAQPAM True PC9_epitope_Rep3 955.45455020123 955.45344993586 28.379 2 0.11244402223287268 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 43732 22467 IITDFDMTL True PC9_epitope_Rep5 1067.52089842555 1067.5198099358602 91.422 2 0.11244106504863587 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF', 'ENST00000461851.1_1_7:33061643-33066527:-|nuORF', 'ENST00000464840.5_1_7:33063600-33075596:-|nuORF'] 73810 11077 NHDTGEYVL True PC9_epitope_Rep3 1046.46688870674 1046.4657899358601 47.606 2 0.11243799794686529 0.002138566531433783 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 2996 4975 AFNQSSRL True PC9_epitope_Rep6 921.4668291370899 921.4657299358599 26.72 2 0.112433280292605 0.002138566531433783 0.9438714419765777 ['ENSG00000197013|ENST00000358491|ZNF429'] 98078 2551 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 14.724 2 0.11243136766059285 0.002138566531433783 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 104904 18179 STFPQFIKA True PC9_epitope_Rep5 1037.5545815123298 1037.5534899358602 74.936 2 0.11242592806596834 0.002138566531433783 0.9438714419765777 ['ENSG00000040487|ENST00000375153|SLC66A1'] 86620 18401 QRDSLLWKL True PC9_epitope_Rep5 1157.6556925359298 1157.65405490379 75.798 3 0.11242430161485123 0.002138566531433783 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 131787 17731 VYAILTHGI True PC9_epitope_Rep2 985.5596668927699 985.55856993586 73.483 2 0.11242304822178935 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 97740 12223 SHGEPTITSL True PC9_epitope_Rep5 1040.51383889916 1040.51274993586 52.003 2 0.11242072473366974 0.002138566531433783 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 57534 15018 LEKSFYQF True PC9_epitope_Rep6 1060.5229470308798 1060.52184993586 69.793 2 0.11241544716074424 0.002138566531433783 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 119836 6144 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51676993586 28.607 2 0.11239901171555111 0.002138566531433783 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 1255 7686 AEDPETQVV True H1975_Epitope_Rep3 986.4556553166999 986.4551049679301 34.548 1 0.11237994400898321 0.002138566531433783 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 86326 13232 QQIGNAKISL True PC9_epitope_Rep1 1070.6084079903399 1070.60730993586 55.762 2 0.1123788881124382 0.002138566531433783 0.9438714419765777 ['ENSG00000100625|ENST00000216513|SIX4', 'SIX4|p.Q371Rfs*8|1|0.35|ENSG00000100625|chr14:60720196-60720197|CT/-|frameshift_variant'] 9379 21877 AVVEFLTSV True PC9_epitope_Rep5 963.5276980581499 963.52660993586 89.187 2 0.11237852240011616 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA'] 34924 18519 GQWASVIRV True PC9_epitope_Rep5 1014.5610638750999 1014.55996993586 76.258 2 0.11237616819326224 0.002138566531433783 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 132370 10834 VYMELSQKL True NCI_RA007_Epitope_Rep4 1109.57908200801 1109.5779899358602 48.525 2 0.11237223895677435 0.002138566531433783 0.9438714419765777 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 126339 9767 VPKNSDPWAA True PC9_epitope_Rep3 1083.53490869691 1083.53380993586 42.522 2 0.11236935992869104 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 21814 18846 ESDPNLFVALY True H1975_Epitope_Rep2 1266.61321858726 1266.6121299358601 78.247 2 0.11236892497924188 0.002138566531433783 0.9438714419765777 ['ABL2|p.P984Hfs*6|1|0.15|ENSG00000143322|chr1:179108316-179108316|G/-|frameshift_variant', 'nc|ENSG00000143322|P42684-4|ABL2', 'nc|ENSG00000143322|P42684-7|ABL2', 'nc|ENSG00000143322|P42684-10|ABL2', 'nc|ENSG00000143322|P42684-5|ABL2', 'nc|ENSG00000143322|P42684-2|ABL2', 'nc|ENSG00000143322|P42684-6|ABL2', 'nc|ENSG00000143322|P42684-3|ABL2', 'ENSG00000143322|ENST00000502732|ABL2', 'ABL2|p.S721Efs*9|1|0.38|ENSG00000143322|chr1:179109106-179109107|-/C|frameshift_variant', 'ENST00000508127.1_1_1:179100431-179112191:-|nuORF', 'ENST00000509520.5_1_1:179086401-179112191:-|nuORF', 'ENST00000504324.1_1_1:179086401-179112191:-|nuORF', 'ABL2|p.P512Lfs*7|1|0.11|ENSG00000143322|chr1:179114904-179114904|G/-|frameshift_variant', 'nc|ENSG00000143322|P42684-8|ABL2'] 35829 5575 GTYVSSVPR True NCI_RA007_Epitope_Rep4 964.4977949121999 964.49668993586 28.044 2 0.11236552691113093 0.002138566531433783 0.9438714419765777 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 73872 13508 NHHLFTTTI True PC9_epitope_Rep1 1082.5508931142201 1082.5497899358602 56.814 2 0.11236481485543737 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 138900 13150 YSDVMLENY True H1975_Epitope_Rep3 1132.47467650912 1132.47356993586 55.83 2 0.11236289770909742 0.002138566531433783 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426', 'ZNF426|p.N172Tfs*37|1|0.12|ENSG00000130818|chr19:9529532-9529532|C/-|frameshift_variant', 'ENSG00000198028|ENST00000301480|ZNF560'] 6910 13361 AQLAHIQAL True PC9_epitope_Rep5 963.55016483823 963.54906993586 56.407 2 0.11236199338621755 0.002138566531433783 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 133229 17531 WEDNIIWDA True H1975_Epitope_Rep2 1160.51383889916 1160.51274993586 72.736 2 0.11235955337757333 0.002138566531433783 0.9438714419765777 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.A666Gfs*38|1|0.45|ENSG00000122728|chr9:32633585-32633586|-/T|frameshift_variant', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 126771 5582 VPSLQGEKA True PC9_epitope_Rep4 927.5025459394699 927.50144993586 28.251 2 0.11235861272483581 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 133334 7731 WESPSPPKP True H1975_Epitope_Rep3 1023.5025459394699 1023.50144993586 34.72 2 0.11235640516943189 0.002138566531433783 0.9438714419765777 ['ENST00000514882.5_1_5:10683562-10761180:-|nuORF', 'ENSG00000112977|ENST00000230895|DAP'] 61300 7291 LLDVRDRDSY True H1975_Epitope_Rep2 1250.62551460646 1250.62440993586 32.983 2 0.11234570649022185 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000106477|Q9BYV8-5|CEP41', 'nc|ENSG00000106477|Q9BYV8-2|CEP41', 'ENSG00000106477|ENST00000223208|CEP41'] 1382 8266 AEEFKVPAA True H1975_Epitope_Rep1 960.4916469025998 960.49054993586 36.734 2 0.11233508683758929 0.002138566531433783 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 6338 6066 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 28.323 2 0.11232313673814698 0.002138566531433783 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 76962 19062 NVPEGLLATV True PC9_epitope_Rep6 1011.56006081559 1011.55896993586 85.966 2 0.11231433561933243 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 134065 19987 WQLLLPTAL True NCI_RA007_Epitope_Rep3 1053.62226714933 1053.62116993586 87.106 2 0.1123142087400442 0.002138566531433783 0.9438714419765777 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENSG00000162747|ENST00000650385|FCGR3B'] 96294 7668 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 34.447 2 0.112299345090947 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 72904 18657 NAVVELVTV True PC9_epitope_Rep6 942.5385970950199 942.5380449679301 84.407 1 0.11229888304581612 0.002138566531433783 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 127229 20135 VQIGDIVTV True PC9_epitope_Rep4 942.5385970950199 942.5380449679301 85.585 1 0.1122863763824913 0.002138566531433783 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 140895 21348 YYVGGEIVTI True PC9_epitope_Rep1 1112.57537652656 1112.5748749679299 86.946 1 0.11228317039596301 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 137185 13941 YLDTVPEVY True H1975_Epitope_Rep1 1097.52809198097 1097.52757496793 58.779 1 0.11228167481396235 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 102644 16378 SQDFPGSNL True PC9_epitope_Rep3 963.42977492203 963.42866993586 68.136 2 0.11227881771726933 0.002138566531433783 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 139204 17378 YSVDRLYEL True PC9_epitope_Rep6 1156.5764391557198 1156.57534993586 79.46 2 0.11227698199349279 0.002138566531433783 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 22246 10752 ETDNNIVVY True H1975_Epitope_Rep3 1065.4978544818498 1065.49727496793 46.436 1 0.11227135805925173 0.002138566531433783 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 32205 21397 GFGFILFK True PC9_epitope_Rep2 927.5218248320699 927.52072993586 87.774 2 0.11226875512205152 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000197451|Q99729-3|HNRNPAB', 'nc|ENSG00000197451|Q99729-4|HNRNPAB', 'nc|ENSG00000197451|Q99729|HNRNPAB', 'ENSG00000197451|ENST00000358344|HNRNPAB', 'ENST00000406003.2_1_12:10264431-10264902:+|nuORF'] 46741 20160 IVAPGTFEV True PC9_epitope_Rep1 931.5014833103099 931.5009349679301 82.374 1 0.11226839717123324 0.002138566531433783 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 47568 22103 IYM[Oxidation]DTLNIF True PC9_epitope_Rep5 1144.547447907 1144.54634993586 90.051 2 0.11226694354003557 0.002138566531433783 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 31679 8894 GEIENQITAA True H1975_Epitope_Rep2 1044.50875351872 1044.5076499358602 39.182 2 0.1122644586819665 0.002138566531433783 0.9438714419765777 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 103615 13582 SRDKTIIMW True PC9_epitope_Rep4 1148.60121443492 1148.59957490379 60.137 3 0.11225789809803222 0.002138566531433783 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 27668 20401 FQDEINWRL True PC9_epitope_Rep5 1219.5985715826298 1219.59746993586 83.51 2 0.11225400230141949 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF'] 120309 16683 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 68.999 2 0.11225311509821768 0.002138566531433783 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 4289 6140 AIITPPPAK True NCI_RA007_Epitope_Rep4 906.5538532363399 906.55274993586 30.23 2 0.11224548133093086 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 31571 10252 GEFSITYKP True H1975_Epitope_Rep2 1040.5178616504397 1040.51727496793 44.441 1 0.11223926500841272 0.002138566531433783 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 126515 18204 VPNLQTVSV True PC9_epitope_Rep3 955.53384606775 955.53274993586 75.233 2 0.11223892441916812 0.002138566531433783 0.9438714419765777 ['ENSG00000105866|ENST00000222584|SP4'] 102953 11118 SQIPAQPSV True PC9_epitope_Rep4 925.48689587533 925.48578993586 50.542 2 0.112228189960796 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 28404 16029 FSDVMEDLY True H1975_Epitope_Rep3 1117.4637774722498 1117.46327496793 67.113 1 0.11222623515031627 0.002138566531433783 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 4111 7540 AHTAEVNCL True PC9_epitope_Rep2 956.43856578392 956.43746993586 34.369 2 0.11221110883650494 0.002138566531433783 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 67272 4699 LTDNGRHITY True H1975_Epitope_Rep3 1188.58873517492 1188.5870849037901 23.2 3 0.11221077228948174 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 103454 16543 SRAGLQFPV True PC9_epitope_Rep3 973.53451477409 973.53340993586 68.771 2 0.11220596133171519 0.002138566531433783 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC4|p.R30Q|1|0.07|ENSG00000278463|chr6:26033480-26033480|C/T|missense_variant', 'H2AC13|p.R30P|1|0.16|ENSG00000196747|chr6:27808298-27808298|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 38515 4223 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 23.217 2 0.11220255179637938 0.002138566531433783 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 37987 9796 HEGPVWQV True H1975_Epitope_Rep2 950.46101548066 950.45990993586 42.669 2 0.11220109746151723 0.002138566531433783 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 60220 21962 LIDEQILCV True PC9_epitope_Rep5 1044.5525329069999 1044.5514299358601 89.512 2 0.11220014307766805 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 75591 19755 NQQLPIESQMV True PC9_epitope_Rep3 1285.63363676201 1285.63252993586 81.215 2 0.11219939419834256 0.002138566531433783 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 44252 8437 ILTLEERGDQG True NCI_RA007_Epitope_Rep1 1229.62518025329 1229.6240899358602 36.816 2 0.11219702351691599 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 38646 9000 HHMGGMAGL True PC9_epitope_Rep1 909.3949271501299 909.39382993586 39.466 2 0.11219580092615133 0.002138566531433783 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 9864 12854 AYMDAPKAAL True PC9_epitope_Rep2 1049.52156713189 1049.52046993586 54.743 2 0.11219268927426625 0.002138566531433783 0.9438714419765777 ['ENST00000494854.5_1_3:48510508-48510649:-|nuORF', 'ENST00000497863.1_1_3:48510508-48511042:-|nuORF', 'nc|ENSG00000164054|Q8N114-3|SHISA5', 'ENST00000465449.5_1_3:48510508-48514931:-|nuORF', 'nc|ENSG00000164054|Q8N114-2|SHISA5', 'nc|ENSG00000164054|Q8N114-5|SHISA5', 'ENSG00000164054|ENST00000296444|SHISA5'] 104200 15861 SSDGAISLLTY True H1975_Epitope_Rep3 1125.55536935797 1125.55477496793 66.458 1 0.11218959277493365 0.002138566531433783 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 18331 20939 EIVTTIPTI True PC9_epitope_Rep2 985.56956287013 985.56846993586 85.989 2 0.11218566659746909 0.002138566531433783 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 134349 12352 WSDGHLIYY True H1975_Epitope_Rep1 1152.52400966004 1152.52290993586 52.542 2 0.11218250522874361 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-4|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-5|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-2|PLEKHB2'] 43409 18504 IHSEPLGVVL True PC9_epitope_Rep1 1062.60734536118 1062.6062499358602 75.966 2 0.11218208654647917 0.002138566531433783 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 141 15362 AADEVLAVL True NCI_RA007_Epitope_Rep3 899.4963979298699 899.49530993586 67.985 2 0.11218054681352402 0.002138566531433783 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'nc|ENSG00000144028|O75643-2|SNRNP200'] 102252 11327 SPTGGFVDA True PC9_epitope_Rep4 849.3868474808899 849.3862949679301 51.348 1 0.11217650842782953 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 4468 14094 AKFSLPVSL True NCI_RA007_Epitope_Rep4 960.5644179200399 960.56332993586 61.494 2 0.1121750542703655 0.002138566531433783 0.9438714419765777 ['ENSG00000103148|ENST00000611875|NPRL3'] 83689 10743 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 46.35 1 0.11217200192414034 0.002138566531433783 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 111252 20086 TLGPVPEI True PC9_epitope_Rep3 824.4643695256 824.46382496793 82.512 1 0.1121700075889999 0.002138566531433783 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 37617 7109 GYVQSKEMI True NCI_RA007_Epitope_Rep3 1053.5164817514499 1053.5153899358602 35.081 2 0.11216741188628844 0.002138566531433783 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3', 'nc|ENSG00000108344|O43242-2|PSMD3', 'ENST00000415039.7_1_17:38140716-38152959:+|nuORF', 'THRA-PSMD3|1|fusion'] 37699 18543 HAMTEFLEV True PC9_epitope_Rep4 1075.50083168731 1075.4997299358602 79.4 2 0.11215927868758314 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 105245 5574 STSNSFNLK True NCI_RA007_Epitope_Rep4 996.48762415132 996.48652993586 28.04 2 0.11215402664776129 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 35593 9666 GTITTFEHA True PC9_epitope_Rep2 975.4661604307499 975.46506993586 42.518 2 0.11215291933960658 0.002138566531433783 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 78185 9108 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 39.885 2 0.11215205072846815 0.002138566531433783 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 102152 14266 SPRPPLISV True PC9_epitope_Rep2 964.57056592964 964.56946993586 60.141 2 0.11214992494437659 0.002138566531433783 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 7129 11775 AQYEHDLEV True PC9_epitope_Rep1 1102.4931034545798 1102.49200993586 50.165 2 0.1121483552296071 0.002138566531433783 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 47261 20737 IYEPNFIFF True NCI_RA007_Epitope_Rep4 1188.5855472874398 1188.5844499358602 89.847 2 0.11214768961364871 0.002138566531433783 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 35659 8443 GTMTGMLYK True NCI_RA007_Epitope_Rep4 1000.47217441132 1000.47106993586 39.292 2 0.11214445231995082 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 21183 11508 EREQVIAAL True PC9_epitope_Rep6 1027.5662088251897 1027.5651099358602 55.345 2 0.11214119150327563 0.002138566531433783 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 3924 6811 AHDPAGPSL True PC9_epitope_Rep5 863.41373093507 863.41262993586 31.17 2 0.11213846045199684 0.002138566531433783 0.9438714419765777 ['ZNF703|p.G568Dfs*14|1|0.18|ENSG00000183779|chr8:37698603-37698603|G/-|frameshift_variant', 'ZNF703|p.G558Afs*24|1|0.13|ENSG00000183779|chr8:37698569-37698569|G/-|frameshift_variant', 'ENSG00000183779|ENST00000331569|ZNF703'] 21605 16737 ERSNDYFVL True PC9_epitope_Rep6 1141.54038800017 1141.53928993586 76.868 2 0.11213668136538978 0.002138566531433783 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D8B|p.R30G|1|0.06|ENSG00000133138|chrX:106802941-106802941|C/G|missense_variant'] 4139 16054 AHTTVIIDL True PC9_epitope_Rep4 981.5494961318899 981.54838993586 69.687 2 0.11213445249120817 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000138085|Q6UW56-2|ATRAID', 'ENSG00000138085|ENST00000380171|ATRAID', 'nc|ENSG00000138085|Q6UW56-3|ATRAID'] 6678 8609 AQAPDLQRV True PC9_epitope_Rep5 996.5352430500799 996.53414993586 38.058 2 0.11213354253275178 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 40167 13804 HRFGGLVL True PC9_epitope_Rep2 897.5184707871299 897.51736993586 58.38 2 0.11213017417524672 0.002138566531433783 0.9438714419765777 ['ENSG00000007520|ENST00000007390|TSR3'] 107587 8914 TAFENAYLK True NCI_RA007_Epitope_Rep4 1055.5287606873096 1055.52766993586 41.12 2 0.11212415234132886 0.002138566531433783 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant'] 106438 18636 SVVAAVQGL True PC9_epitope_Rep1 842.48616759934 842.48506993586 76.471 2 0.11211172462613966 0.002138566531433783 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 95653 11439 SAVPPGTSL True PC9_epitope_Rep4 827.43888305375 827.43778993586 51.77 2 0.11210718073354632 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 60080 13065 LHSNGFSL True PC9_epitope_Rep1 873.4344663796501 873.43336993586 55.123 2 0.11210152939579941 0.002138566531433783 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 48200 18846 KAYTSQFISL True PC9_epitope_Rep1 1156.6128246644398 1156.61172993586 77.276 2 0.11210130348521914 0.002138566531433783 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 25285 7724 FEDVVNQSSPK True PC9_epitope_Rep4 1248.59863115228 1248.5975299358602 37.097 2 0.112095602638528 0.002138566531433783 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 40485 11324 HSELLEDYY True H1975_Epitope_Rep2 1167.50841916555 1167.50732993586 48.606 2 0.11209097085057856 0.002138566531433783 0.9438714419765777 ['ENSG00000117528|ENST00000370214|ABCD3'] 73573 20212 NFTNVAATF True PC9_epitope_Rep5 983.4712458111899 983.47014993586 82.792 2 0.11209044869203812 0.002138566531433783 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 111037 15599 TLDPQTGLFY True H1975_Epitope_Rep1 1153.5655401188499 1153.5649749679299 65.285 1 0.11209010652204704 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 32666 15423 GHMGEGFAL True PC9_epitope_Rep1 917.4065373796499 917.40544993586 64.144 2 0.11208571821634095 0.002138566531433783 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 83284 19107 QAFVIFKEV True PC9_epitope_Rep4 1079.60153170475 1079.6004299358601 81.586 2 0.11208522137797149 0.002138566531433783 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF'] 70151 13747 LYLDEAHSI True PC9_epitope_Rep6 1059.52367530687 1059.52256993586 64.671 2 0.11208236325883608 0.002138566531433783 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'SPTLC2|p.A351S|1|0.2|ENSG00000100596|chr14:77555425-77555425|C/A|missense_variant'] 70847 5112 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 24.743 2 0.11207991889664073 0.002138566531433783 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 46251 9857 ITDTSIGAY True H1975_Epitope_Rep2 939.4549270407099 939.4543749679301 42.902 1 0.11207648483696123 0.002138566531433783 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'COL12A1|p.W925C|1|0.38|ENSG00000111799|chr6:75165715-75165715|C/A|missense_variant'] 15809 8122 EDIFYTSK True H1975_Epitope_Rep3 1001.47057710485 1001.46948993586 36.218 2 0.11207341134749482 0.002138566531433783 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENST00000460124.5_1_10:5042672-5046051:-|nuORF', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|250|16.96|0.18|6.55|+|ENST00000602997|AKR1C3,AKR1C3', 'ENST00000480697.6_1_10:5136636-5139787:+|nuORF', 'ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|317|31.41|0.67|5.55|+|ENST00000380859|AKR1C1,AKR1C1', 'chr10:4963893-4965914|317|27.99|0.97|4.85|+|ENST00000380859|AKR1C1,AKR1C1', 'ENST00000477661.1_1_10:5005492-5009304:+|nuORF', 'nc|ENSG00000151632|P52895-2|AKR1C2'] 71426 22317 MIPLLLAAL True PC9_epitope_Rep6 953.5983609006099 953.59726993586 98.813 2 0.1120707887878157 0.002138566531433783 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 47438 13775 IYIKQIKTF True PC9_epitope_Rep5 1152.6906810623198 1152.6890249037901 58.005 3 0.11206101973078669 0.002138566531433783 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 29697 12614 FVNVVPTFGK True NCI_RA007_Epitope_Rep2 1106.6124307416198 1106.61132993586 53.679 2 0.11203946064352314 0.002138566531433783 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 35716 4541 GTSITVPQK True NCI_RA007_Epitope_Rep3 929.5181960036099 929.51708993586 24.73 2 0.11203865855086943 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000134851|Q9HC07-2|TMEM165', 'ENST00000508404.5_1_4:56269487-56291616:+|nuORF', 'ENSG00000134851|ENST00000381334|TMEM165'] 71263 19211 MGLERLVSV True PC9_epitope_Rep5 1002.55320161334 1002.55210993586 78.934 2 0.11203353472326293 0.002138566531433783 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 53813 15193 KYFLWVVKF True NCI_RA007_Epitope_Rep3 1228.7008518231999 1228.69921490379 67.283 3 0.11203350796588099 0.002138566531433783 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 46958 17725 IVMQEVETV True PC9_epitope_Rep1 1046.53179746242 1046.5307099358602 72.977 2 0.11203164928652427 0.002138566531433783 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 104301 16569 SSELFTLTY True H1975_Epitope_Rep1 1059.51244191683 1059.5113499358602 69.108 2 0.11202374446388613 0.002138566531433783 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 114407 8516 TSDSTVYDY True H1975_Epitope_Rep3 1049.41893545481 1049.41837496793 37.742 1 0.11202346496205942 0.002138566531433783 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 52875 7333 KRFDDKYTL True PC9_epitope_Rep2 1184.6189726740397 1184.61733490379 33.588 3 0.11202313935278403 0.002138566531433783 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 117418 10337 VADLVENSY True H1975_Epitope_Rep2 1008.4763907612801 1008.47528993586 44.769 2 0.11202214428303711 0.002138566531433783 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 108509 11755 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 50.291 1 0.11201662879879971 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 76705 11335 NTPAM[Oxidation]YVAIQA True H1975_Epitope_Rep1 1193.57505963717 1193.57396993586 48.579 2 0.11201640483396658 0.002138566531433783 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000428275.1_1_X:53172669-53172729:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 97696 12347 SHDVVVMTV True PC9_epitope_Rep4 985.49026700361 985.48916993586 55.301 2 0.11201353424578231 0.002138566531433783 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6'] 128368 13547 VSDPVGVLY True H1975_Epitope_Rep1 947.49639792987 947.4958449679301 57.232 1 0.11201325470019492 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 133046 10727 VYVVGTAHF True NCI_RA007_Epitope_Rep2 991.5127167003499 991.51160993586 46.326 2 0.11200683381734852 0.002138566531433783 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 87909 11307 QVNDAFTHV True PC9_epitope_Rep5 1029.4879585044898 1029.48686993586 48.485 2 0.11199275506461139 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48', 'nc|ENSG00000114742|Q8TAF3-5|WDR48'] 89669 6289 REVDPPMGP True H1975_Epitope_Rep3 996.4698659121999 996.46876993586 29.196 2 0.11199171646762343 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 140903 19226 YYVGGEIVTI True PC9_epitope_Rep6 1112.57537652656 1112.57426993586 86.605 2 0.11198618788910775 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 108347 4882 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 23.864 2 0.11198106226680586 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 19959 12967 EM[Oxidation]DSPILGDY True H1975_Epitope_Rep3 1154.4801561928198 1154.47957496793 55.11 1 0.11197343606380748 0.002138566531433783 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 135912 11075 YETLTITQA True H1975_Epitope_Rep1 1038.5233409536997 1038.52277496793 47.563 1 0.11197231979960123 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 128306 11521 VSDAANVMVY True H1975_Epitope_Rep2 1067.49574630687 1067.49464993586 49.373 2 0.11197045460100809 0.002138566531433783 0.9438714419765777 ['ENSG00000115548|ENST00000312912|KDM3A', 'ENST00000441719.5_1_2:86711112-86716803:+|nuORF'] 107998 10159 [Acetylation]-TDAAVSFAK True H1975_Epitope_Rep3 950.47091177432 950.46980993586 44.119 2 0.11195285062089982 0.002138566531433783 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant'] 6642 19511 APYPGFLSV True PC9_epitope_Rep6 949.49091862661 949.48982993586 87.711 2 0.11194196747755111 0.002138566531433783 0.9438714419765777 ['ENSG00000160447|ENST00000291906|PKN3'] 43393 17575 IHSDVVFVV True PC9_epitope_Rep4 1013.55458151233 1013.55348993586 75.619 2 0.11193601814890572 0.002138566531433783 0.9438714419765777 ['ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1', 'ENST00000464431.1_1_3:127395028-127395444:+|nuORF', 'ENST00000491633.5_1_3:127394949-127398855:+|nuORF'] 6486 7301 APTGDLPRA True PC9_epitope_Rep5 896.4715801643599 896.47048993586 33.045 2 0.11193584409953808 0.002138566531433783 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 40124 6716 HRDNAGYTAL True PC9_epitope_Rep5 1116.5312202987998 1116.53012993586 30.804 2 0.11193385099212623 0.002138566531433783 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 34794 6317 GQTGVIRSV True PC9_epitope_Rep2 915.5137793295099 915.51268993586 29.696 2 0.11193347377627452 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 69574 12579 LVTSINHAL True PC9_epitope_Rep5 966.5498304850599 966.54872993586 53.384 2 0.11193032629357848 0.002138566531433783 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 109793 6255 THITAQTAV True PC9_epitope_Rep3 940.4977949122 940.49668993586 29.097 2 0.11192860701228456 0.002138566531433783 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 40159 5347 HRDYETATL True PC9_epitope_Rep6 1104.51998690876 1104.5188899358602 28.421 2 0.11190846475383265 0.002138566531433783 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 6989 19644 AQQELKLLL True PC9_epitope_Rep1 1054.6386454894598 1054.63754993586 80.385 2 0.11190576466155921 0.002138566531433783 0.9438714419765777 ['ENSG00000119041|ENST00000263956|GTF3C3'] 4136 12793 AHTPVIISV True PC9_epitope_Rep6 935.54401682863 935.54290993586 60.705 2 0.11190424391620635 0.002138566531433783 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 8122 12097 ATESVSLYY True H1975_Epitope_Rep3 1031.48114178855 1031.48057496793 51.696 1 0.11190086534608329 0.002138566531433783 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 84204 9197 QETLTNISA True H1975_Epitope_Rep3 975.48728979815 975.48618993586 40.368 2 0.11189629214951989 0.002138566531433783 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF', 'nc|ENSG00000167657|O43293-2|DAPK3'] 96507 4913 SELEMAKA True NCI_RA007_Epitope_Rep5 877.4215187374499 877.4204299358599 25.594 2 0.11189527463886301 0.002138566531433783 0.9438714419765777 ['ENSG00000267796|ENST00000301159|LIN37'] 54007 9822 KYLEHPLLL True NCI_RA007_Epitope_Rep3 1124.65938093404 1124.65828993586 45.709 2 0.11189458273650713 0.002138566531433783 0.9438714419765777 ['ENSG00000114999|ENST00000233336|TTL'] 193 19581 AAFDGGFTV True PC9_epitope_Rep4 883.4075829254699 883.40703496793 83.44 1 0.11189056023801196 0.002138566531433783 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 26008 5409 FHDESTQV True PC9_epitope_Rep3 961.41412485789 961.41302993586 25.879 2 0.11188651241931805 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 88590 4586 RALKTATSL True NCI_RA007_Epitope_Rep4 959.57637958607 959.57528993586 24.046 2 0.11187972651494985 0.002138566531433783 0.9438714419765777 ['ENSG00000170876|ENST00000306077|TMEM43'] 105974 17961 SVLGSLSSV True PC9_epitope_Rep6 847.4650978015901 847.46454496793 81.716 1 0.11187634340752955 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF'] 72620 8599 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep2 1074.57433136118 1074.5732299358601 38.437 2 0.11187086892490834 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 8150 7459 ATFPDPNVK True NCI_RA007_Epitope_Rep2 987.5025459394699 987.50144993586 33.641 2 0.11186825191405893 0.002138566531433783 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 113222 20530 TQDTNTFFL True PC9_epitope_Rep4 1085.50293986229 1085.5023749679299 87.119 1 0.11186203588205297 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 84609 5339 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 25.924 2 0.11186079164623375 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 45988 17065 ISTEVGITNV True PC9_epitope_Rep2 1031.54989005471 1031.54937496793 70.891 1 0.11185835869078802 0.002138566531433783 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 109630 15757 THDITTISI True PC9_epitope_Rep3 999.52367530687 999.52256993586 65.765 2 0.11185152005932195 0.002138566531433783 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 75770 4666 NRAPNTAEL True PC9_epitope_Rep4 984.4988575413599 984.49776993586 24.476 2 0.11183887645642164 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 61980 16996 LLLPGELAK True PC9_epitope_Rep5 952.5957180483199 952.59462993586 70.394 2 0.1118324371887629 0.002138566531433783 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 47258 21691 IYEPNFIFF True NCI_RA007_Epitope_Rep2 1188.5855472874398 1188.5844499358602 89.878 2 0.11182865948696605 0.002138566531433783 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 106819 11623 SYHPALNAI True PC9_epitope_Rep4 984.5028802926399 984.50178993586 52.466 2 0.11182814856134699 0.002138566531433783 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'BIRC6|p.C777*|1|0.3|ENSG00000115760|chr2:32415620-32415621|TG/-|frameshift_variant', 'BIRC6-YIPF4|1|fusion'] 125613 7200 VMDDGTNEY True H1975_Epitope_Rep3 1042.39134080798 1042.39077496793 32.67 1 0.11182809374902734 0.002138566531433783 0.9438714419765777 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 9477 7526 AVYEGHVSC True PC9_epitope_Rep5 963.4120166829099 963.41090993586 33.898 2 0.11182439385071445 0.002138566531433783 0.9438714419765777 ['ENSG00000105887|ENST00000393085|MTPN'] 67328 21960 LTDQTLIYL True PC9_epitope_Rep1 1078.5910265906998 1078.58992993586 89.287 2 0.11181762681299964 0.002138566531433783 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 101915 10503 SPLLLQAKA True PC9_epitope_Rep6 939.5753169569099 939.57420993586 51.182 2 0.1118174239287571 0.002138566531433783 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 103488 4782 SRAPSVATV True PC9_epitope_Rep6 886.4872302285 886.48612993586 25.856 2 0.11181716839652256 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 40568 21237 HSSVIFIF True PC9_epitope_Rep5 948.5069030439199 948.50580993586 86.738 2 0.11181152745825167 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 11667 11185 DHDITSQL True PC9_epitope_Rep1 927.42977492203 927.42866993586 47.907 2 0.11180499658590823 0.002138566531433783 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 113895 11690 TRHPFLTSL True PC9_epitope_Rep4 1070.58727862294 1070.5861899358601 52.728 2 0.11179781118598386 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000117020|Q9Y243-2|AKT3', 'ENSG00000117020|ENST00000673466|AKT3'] 83731 10623 QEASEAYLV True H1975_Epitope_Rep3 1008.4763907612797 1008.47587496793 45.932 1 0.11179353426617217 0.002138566531433783 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'H3C13|p.G103R|1|0.12|ENSG00000183598|chr1:149813375-149813375|C/G|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 35512 7231 GTGNLGFPK True NCI_RA007_Epitope_Rep4 889.46576650793 889.46466993586 34.448 2 0.11179336640095895 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 138037 5096 YQDPHSTAV True PC9_epitope_Rep3 1016.45632402304 1016.45522993586 24.686 2 0.1117921110708803 0.002138566531433783 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 9965 12433 AYSAKIALF True NCI_RA007_Epitope_Rep5 982.5487678558999 982.54766993586 54.48 2 0.11178895865793502 0.002138566531433783 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF', 'DPYD|p.G194C|1|0.39|ENSG00000188641|chr1:97699451-97699451|C/A|missense_variant'] 123408 14480 VIDQKVYEI True PC9_epitope_Rep5 1105.60192562757 1105.60082993586 60.699 2 0.11178657120286525 0.002138566531433783 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000406934.5_1_22:38246060-38259001:+|nuORF', 'ENST00000476955.5_1_22:38245435-38266306:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 55045 23320 LALFPGVAL True PC9_epitope_Rep3 899.5480395799099 899.54694993586 94.979 2 0.11178276260878149 0.002138566531433783 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 117189 12058 TYTDVTPRQF True PC9_epitope_Rep4 1226.59315184902 1226.5920499358601 54.187 2 0.11177852622698296 0.002138566531433783 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 139276 5260 YTDHQNSSSYY True H1975_Epitope_Rep1 1363.5316737912701 1363.53056993586 25.295 2 0.11177808158523117 0.002138566531433783 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9'] 70076 18366 LYIGHLTTL True PC9_epitope_Rep4 1029.58588164061 1029.58478993586 78.711 2 0.11177644271706398 0.002138566531433783 0.9438714419765777 ['ERC1|p.C1034Y|1|0.36|ENSG00000082805|chr12:1444638-1444638|G/A|missense_variant', 'ENST00000542302.6_1_12:1519571-1599393:+|nuORF', 'WNK1-ERC1|5|fusion', 'nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'WNK1-ERC1|2|fusion', 'WNK1-ERC1|1|fusion', 'WNK1-ERC1|4|fusion', 'WNK1-ERC1|3|fusion'] 32593 9096 GHDASQITL True PC9_epitope_Rep2 940.46140940348 940.46030993586 40.33 2 0.11177045734005638 0.002138566531433783 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 48900 7428 KEVEQFDVA True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 33.517 2 0.11176975786854672 0.002138566531433783 0.9438714419765777 ['ENST00000488453.1_1_1:38483328-38489297:+|nuORF', 'ENSG00000183520|ENST00000373014|UTP11'] 39753 19109 HPYLFPVAA True PC9_epitope_Rep5 1013.5334521449298 1013.53234993586 78.535 2 0.11175865839319997 0.002138566531433783 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 52539 9526 KPQPSILQA True PC9_epitope_Rep5 980.5654805491998 980.56438993586 41.6 2 0.11175751703595689 0.002138566531433783 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 104150 5224 SSAGPGLLK True NCI_RA007_Epitope_Rep5 828.4705175352 828.46942993586 26.791 2 0.11174912548707754 0.002138566531433783 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 136407 13066 YHETLGEAL True PC9_epitope_Rep5 1031.4923751785898 1031.4912699358601 55.264 2 0.11174740468649995 0.002138566531433783 0.9438714419765777 ['ENSG00000077147|ENST00000371142|TM9SF3', 'ENST00000475401.1_1_10:98336385-98336556:-|nuORF'] 7326 5941 ARSTDQTVL True PC9_epitope_Rep1 989.51417325233 989.51306993586 27.666 2 0.11174678836755761 0.002138566531433783 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 61953 20323 LLLPDVIKV True PC9_epitope_Rep4 1008.6583183048799 1008.65722993586 86.315 2 0.11174431415415198 0.002138566531433783 0.9438714419765777 ['ENSG00000109436|ENST00000442267|TBC1D9'] 74716 18249 NLLAHFINA True PC9_epitope_Rep6 1011.55016483823 1011.54906993586 82.835 2 0.11174184947229807 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 44042 20628 ILLDLTDNRL True PC9_epitope_Rep3 1184.6764875501601 1184.67538993586 84.616 2 0.11173560559927448 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 4063 11977 AHQQSIPAVL True PC9_epitope_Rep4 1062.5821932425 1062.58108993586 53.861 2 0.11173322978483842 0.002138566531433783 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 32010 6877 GETSVPPPP True H1975_Epitope_Rep2 879.4337976733099 879.43270993586 31.372 2 0.11173147778186651 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 102318 5412 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 26.21 2 0.11172750476055948 0.002138566531433783 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 52849 13278 KQYPISLVL True NCI_RA007_Epitope_Rep3 1059.63283183303 1059.6317299358602 59.5 2 0.11172027538996998 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X', 'ENST00000463199.1_1_Y:15025644-15026909:+|nuORF', 'nc|ENSG00000067048|O15523-3|DDX3Y'] 93993 11100 RVPKTLVLV True PC9_epitope_Rep6 1023.6804507317898 1023.6793499358599 53.623 2 0.11171996481401765 0.002138566531433783 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 102581 17749 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51289496793 73.291 1 0.11171112934749243 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 138968 11653 YSESSQLLY True H1975_Epitope_Rep2 1088.50260550912 1088.50207496793 49.893 1 0.11170998047941894 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 53893 15502 KYIEGVSDF True PC9_epitope_Rep5 1056.51277627 1056.51166993586 64.638 2 0.1117097818153589 0.002138566531433783 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 138256 9249 YQVAAAESHPL True PC9_epitope_Rep6 1184.5825871653199 1184.5814899358602 45.728 2 0.11170404848241663 0.002138566531433783 0.9438714419765777 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 4432 16130 AIVKEIVNI True PC9_epitope_Rep4 997.6171817688898 997.61608993586 69.983 2 0.11170065282363062 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 1385 8288 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 36.831 2 0.11169459214622901 0.002138566531433783 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 2821 7530 AEVHPNFTP True H1975_Epitope_Rep2 1010.48214484806 1010.48104993586 33.915 2 0.11169405308357168 0.002138566531433783 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 88486 11851 RAAEPLLTL True NCI_RA007_Epitope_Rep4 982.58113061334 982.58002993586 52.565 2 0.11169308552754766 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF', 'NEMF-C14orf182|1|fusion', 'nc|ENSG00000165525|O60524-5|NEMF'] 22397 15841 ETEVSFLDY True H1975_Epitope_Rep3 1101.4866210918099 1101.48552993586 66.38 2 0.11169170238918609 0.002138566531433783 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 131699 18740 VWSDVTPLTF True NCI_RA007_Epitope_Rep2 1163.58627556343 1163.5857749679299 77.693 1 0.11167831260320768 0.002138566531433783 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 33535 11070 GLIDHQTYL True H1975_Epitope_Rep2 1058.53965972418 1058.53856993586 47.613 2 0.11164961470537231 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 95167 17725 SAAFPGASL True PC9_epitope_Rep2 819.41266830591 819.41156993586 73.461 2 0.11164919102852632 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 4261 22211 AIIGGMFTV True PC9_epitope_Rep3 907.48372507119 907.48317496793 90.721 1 0.11164240788511669 0.002138566531433783 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 3909 13918 AHDDSVMYL True PC9_epitope_Rep4 1049.44879611445 1049.4476899358601 61.438 2 0.11164205651300987 0.002138566531433783 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 106895 18922 SYILRPVAF True PC9_epitope_Rep4 1064.60186605792 1064.6007699358602 80.87 2 0.1116271990966985 0.002138566531433783 0.9438714419765777 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.G520Afs*35|1|0.16|ENSG00000156222|chr15:84935495-84935495|G/-|frameshift_variant'] 39846 10047 HQGPATTVAF True PC9_epitope_Rep2 1027.50869394907 1027.50758993586 43.971 2 0.11162604505433693 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 38533 3750 HHEAGVTAL True PC9_epitope_Rep4 933.4668291370899 933.4657299358599 20.567 2 0.11162155776301065 0.002138566531433783 0.9438714419765777 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 6065 15050 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 62.707 2 0.11161562533289403 0.002138566531433783 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 26639 19584 FLADPSAFVAA True PC9_epitope_Rep6 1107.5600608155898 1107.5589699358602 87.994 2 0.11160970791125774 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 10810 6293 DAFPVAGQK True H1975_Epitope_Rep3 931.4763311916298 931.4752299358599 29.211 2 0.11159490729429192 0.002138566531433783 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A', 'ENST00000588329.5_1_19:13056723-13059660:+|nuORF', 'nc|ENSG00000179262|P54725-2|RAD23A'] 48423 9659 KEEDAFHFV True H1975_Epitope_Rep2 1120.5189242795998 1120.5178299358602 42.134 2 0.1115922831629213 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 54114 11544 KYMEDYHQF True PC9_epitope_Rep3 1259.52810906431 1259.5264649037902 49.415 3 0.11157717224335677 0.002138566531433783 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 31236 12785 GDLPFVVPR True NCI_RA007_Epitope_Rep2 998.5549158654999 998.55380993586 54.347 2 0.11157548153670692 0.002138566531433783 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 84659 6133 QHEGGVQEL True PC9_epitope_Rep3 995.46722305991 995.46612993586 28.638 2 0.11157490377491698 0.002138566531433783 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 96543 11993 SELPGAFEA True H1975_Epitope_Rep3 919.4287122928699 919.42816496793 51.291 1 0.111574838255372 0.002138566531433783 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 132133 7089 VYISEHEHF True NCI_RA007_Epitope_Rep4 1159.5298233164701 1159.5281849037901 33.89 3 0.11157403585863296 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 96759 9978 SEQPPNSVLP True H1975_Epitope_Rep3 1066.5294889633 1066.52838993586 43.416 2 0.11157054359324894 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000241839|Q8TD55-2|PLEKHO2', 'ENSG00000241839|ENST00000323544|PLEKHO2'] 86016 14955 QPITPGPSI True PC9_epitope_Rep3 908.4967322830399 908.49618496793 62.656 1 0.11156881357210041 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 92108 10363 RPYQPLPEA True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 44.743 2 0.11156451523990371 0.002138566531433783 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 25308 7054 FEELDRPAA True H1975_Epitope_Rep1 1046.50327421546 1046.5021699358601 32.165 2 0.11156421978479891 0.002138566531433783 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 102563 17839 SQANIAQVL True PC9_epitope_Rep1 942.5134449763399 942.51289496793 73.412 1 0.1115639377711357 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 1279 5310 AEDRQVSITA True H1975_Epitope_Rep3 1088.5462016566 1088.5451099358602 25.501 2 0.11155279261853088 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 86181 18628 QPSSLLPLA True PC9_epitope_Rep6 924.5280324113199 924.52748496793 84.295 1 0.11154901864016398 0.002138566531433783 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 102814 21003 SQFPGAITL True PC9_epitope_Rep1 932.4967322830399 932.49618496793 85.616 1 0.11154273397498198 0.002138566531433783 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 45149 12650 IRDEGISAL True PC9_epitope_Rep1 972.52400966004 972.52290993586 53.527 2 0.11154105592116224 0.002138566531433783 0.9438714419765777 ['ENSG00000100372|ENST00000435456|SLC25A17', 'MKL1-SLC25A17|1|fusion', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 136660 6995 YIDQEELNK True PC9_epitope_Rep4 1150.5506183307 1150.5495299358602 34.153 2 0.11153907730027707 0.002138566531433783 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 113465 22353 TQRGALFLLF True PC9_epitope_Rep3 1164.6655289436399 1164.6644299358602 91.263 2 0.1115352381932807 0.002138566531433783 0.9438714419765777 ['ENST00000481988.1_1_X:99901319-99905990:+|nuORF', 'ENSG00000102359|ENST00000373004|SRPX2'] 21659 13281 ERTSFNYAM True PC9_epitope_Rep3 1117.4862442523297 1117.4851499358601 56.119 2 0.11151959311576749 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 24569 18731 FALPGLLHA True PC9_epitope_Rep6 937.5385375253701 937.53798496793 84.69 1 0.11151703368823378 0.002138566531433783 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 40111 14039 HRDGTVWQL True PC9_epitope_Rep5 1110.55704112382 1110.55594993586 59.016 2 0.11151349945577198 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7'] 129443 10197 VTELHVISY True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 44.163 2 0.11151260601016144 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 26827 21058 FLEKLLPPV True PC9_epitope_Rep3 1054.6426682407398 1054.6415699358602 86.281 2 0.11150979091849134 0.002138566531433783 0.9438714419765777 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 110738 19402 TKFGGIVVL True PC9_epitope_Rep2 932.5695033004798 932.56840993586 80.008 2 0.11150419204110756 0.002138566531433783 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 44135 20522 ILPGSLFRF True PC9_epitope_Rep4 1048.60695143836 1048.60584993586 87.089 2 0.11149364775736534 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000136536|Q9H992-2|MARCHF7', 'ENSG00000136536|ENST00000409175|MARCHF7'] 27652 20162 FQDDNNLYL True PC9_epitope_Rep3 1140.50875351872 1140.5076499358602 82.807 2 0.11147820709100345 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 59160 10800 LGEYGFQNA True H1975_Epitope_Rep3 997.4505103666099 997.44940993586 46.621 2 0.11147790171272327 0.002138566531433783 0.9438714419765777 ['CON__P02769'] 7169 9496 ARDDTLITA True PC9_epitope_Rep5 974.50327421546 974.50216993586 41.482 2 0.1114776281772854 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 57321 8428 LEGPVPEGA True H1975_Epitope_Rep2 867.4337976733099 867.43324496793 37.37 1 0.11147683035444099 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'AHNAK2|p.D3788Tfs*9|1|0.29|ENSG00000185567|chr14:104944089-104944089|C/-|frameshift_variant', 'AHNAK2|p.A3880Tfs*22|1|0.17|ENSG00000185567|chr14:104943798-104943813|GTCCTTTGAGGCCGGC/-|frameshift_variant', 'AHNAK2|p.P5142Qfs*2|1|0.14|ENSG00000185567|chr14:104940026-104940026|G/-|frameshift_variant'] 138288 14762 YQYPVIIHL True H1975_Epitope_Rep1 1144.6280808057597 1144.6269899358601 62.005 2 0.11147053611545714 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 99994 22065 SLITGQDLLSV True PC9_epitope_Rep3 1144.63395403184 1144.6328499358601 90.171 2 0.11146466530489951 0.002138566531433783 0.9438714419765777 ['ENSG00000100625|ENST00000216513|SIX4'] 16079 11504 EEDGFSLAS True H1975_Epitope_Rep2 953.39780608741 953.39725496793 49.307 1 0.11146160986157137 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'PKD1|p.P3458H|1|0.26|ENSG00000008710|chr16:2097351-2097351|G/T|missense_variant'] 83723 6658 QEARPPLVSA True H1975_Epitope_Rep2 1066.5771078620598 1066.5760099358602 30.518 2 0.11145216924305984 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 100425 9412 SLPDFPAAAK True NCI_RA007_Epitope_Rep4 1015.5338460677499 1015.53274993586 43.062 2 0.1114492589070768 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'ENST00000539881.5_1_16:57068826-57081664:+|nuORF', 'ENST00000538930.5_1_16:57075247-57096263:+|nuORF'] 65000 8088 LSDGVAVLK True NCI_RA007_Epitope_Rep2 900.5280324113199 900.52692993586 36.092 2 0.1114470527633009 0.002138566531433783 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 25932 13128 FGPGVAFR True PC9_epitope_Rep2 849.4497225209699 849.44862993586 55.77 2 0.11144427014864744 0.002138566531433783 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 70753 6652 MEDAKVYVA True H1975_Epitope_Rep2 1024.4899326504399 1024.4888299358602 30.494 2 0.11144117614605996 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 97062 5757 SEYLQQHVA True NCI_RA007_Epitope_Rep3 1073.51417325233 1073.5130699358601 29.626 2 0.11143577434226835 0.002138566531433783 0.9438714419765777 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 97637 5839 SHANSAVVL True PC9_epitope_Rep6 896.47158016436 896.47048993586 30.677 2 0.1114238249078863 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 70438 18842 LYRLKFNEF True PC9_epitope_Rep5 1228.6604435632 1228.65880490379 77.493 3 0.11142095091411397 0.002138566531433783 0.9438714419765777 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 96242 8758 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 38.651 2 0.11141070020600102 0.0021622637961831344 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 65116 10373 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42760993586 44.91 2 0.11140944073996543 0.0021622637961831344 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 87303 20167 QSVDLVFPV True PC9_epitope_Rep6 1002.5385970950199 1002.53807496793 90.246 1 0.11138536212377056 0.0021622637961831344 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 6337 5713 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 26.97 2 0.1113843299773955 0.0021622637961831344 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 38517 4368 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 23.893 2 0.11138190863485203 0.0021622637961831344 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 62257 15372 LLQESLAQA True PC9_epitope_Rep1 971.52876068731 971.52766993586 63.946 2 0.11138120420410867 0.0021622637961831344 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 100122 18869 SLLDDLHSA True PC9_epitope_Rep1 969.47672511445 969.47562993586 77.364 2 0.11138039493327866 0.0021622637961831344 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 102674 4554 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 22.61 2 0.11137567392785891 0.0021622637961831344 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 27515 20312 FPFAPPAAA True PC9_epitope_Rep5 887.4541391950698 887.45359496793 83.174 1 0.11137547021084922 0.0021622637961831344 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 8264 4192 ATIQGAYAR True NCI_RA007_Epitope_Rep3 949.4981292653698 949.49702993586 23.124 2 0.11137536015620537 0.0021622637961831344 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 128906 6495 VSTGDVNVE True H1975_Epitope_Rep2 918.42944056886 918.4288949679301 29.9 1 0.11137393289086642 0.0021622637961831344 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 2841 7828 AEVRVIAPP True H1975_Epitope_Rep1 950.5549158654998 950.55380993586 35.061 2 0.1113665625892054 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000172731|Q8TCA0-3|LRRC20', 'nc|ENSG00000172731|Q8TCA0-2|LRRC20', 'ENSG00000172731|ENST00000446961|LRRC20'] 57319 6658 LEGPAAPSA True H1975_Epitope_Rep3 811.40758292547 811.40703496793 30.562 1 0.1113615111079797 0.0021622637961831344 0.9438714419765777 ['ENST00000287652.8_1_3:10290629-10291047:+|nuORF'] 25347 12055 FEGGVVIAA True H1975_Epitope_Rep2 861.4596184983299 861.4590749679301 51.451 1 0.1113565044042733 0.0021622637961831344 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 127022 6546 VPYGVGKAA True PC9_epitope_Rep3 860.4756029156398 860.4745099358599 30.206 2 0.11134232027056833 0.0021622637961831344 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 43412 18622 IHSEPLGVVL True PC9_epitope_Rep3 1062.60734536118 1062.6062499358602 76.851 2 0.11133993754553367 0.0021622637961831344 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 108304 5461 TEDDPQEVSA True H1975_Epitope_Rep2 1089.44621283181 1089.44567496793 26.032 1 0.1113385072850872 0.0021622637961831344 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 70296 20963 LYPEGLAQL True PC9_epitope_Rep3 1002.5385970950199 1002.53750993586 85.914 2 0.11133673879704957 0.0021622637961831344 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 106960 21483 SYLDSVHFF True PC9_epitope_Rep3 1113.51311062317 1113.51200993586 87.927 2 0.11133575730293661 0.0021622637961831344 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 139378 5314 YTDVSTRY True H1975_Epitope_Rep3 1003.46107505031 1003.46057496793 25.516 1 0.11133524090615245 0.0021622637961831344 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 129940 6209 VTNDGATILK True NCI_RA007_Epitope_Rep1 1030.56587447202 1030.56476993586 28.188 2 0.11132938909473204 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF', 'ENST00000550455.5_1_12:69979244-69981425:+|nuORF', 'ENST00000546859.5_1_12:69979244-69981900:+|nuORF', 'ENST00000550638.5_1_12:69979244-69982049:+|nuORF'] 17429 12790 EHFPQAYSV True PC9_epitope_Rep2 1076.49270953176 1076.4916099358602 54.499 2 0.1113285867831978 0.0021622637961831344 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 102641 16367 SQDFPGSNL True PC9_epitope_Rep1 963.42977492203 963.42866993586 67.775 2 0.11132702547025382 0.0021622637961831344 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 139072 12722 YSLEPVAVELK True NCI_RA007_Epitope_Rep1 1246.68090422426 1246.67980993586 53.47 2 0.11131978216842772 0.0021622637961831344 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 103921 9336 SRNSNTVVF True PC9_epitope_Rep3 1022.5145076055 1022.5134099358601 40.85 2 0.11131908322196418 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4', 'CHD8-TOX4|1|fusion'] 31706 9940 GEIPKVLVA True H1975_Epitope_Rep1 924.5644179200399 924.56332993586 43.169 2 0.11131584087236109 0.0021622637961831344 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'AP2A2-PSMD13|2|fusion', 'AP2A2-PSMD13|3|fusion', 'AP2A2-PSMD13|1|fusion', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 27999 19455 FQVRDIENL True PC9_epitope_Rep1 1132.58767254576 1132.58656993586 79.65 2 0.11130861910387771 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000168003|P08195-5|SLC3A2', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2', 'ENST00000535768.1_1_11:62651934-62652955:+|nuORF', 'ENST00000538682.5_1_11:62651934-62653989:+|nuORF'] 36392 21515 GVIAGLNVL True PC9_epitope_Rep2 854.52255310806 854.52200496793 88.225 1 0.11130726879468342 0.0021622637961831344 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 66584 5348 LSSPATLNSR True NCI_RA007_Epitope_Rep5 1044.5563724174801 1044.55526993586 27.263 2 0.11130019826170452 0.0021622637961831344 0.9438714419765777 ['CON__P00761'] 72677 23862 MYIDPDLLAEL True PC9_epitope_Rep3 1291.6369908069498 1291.6358899358602 97.072 2 0.11129813558792606 0.0021622637961831344 0.9438714419765777 ['ENSG00000104611|ENST00000265807|SH2D4A'] 103144 19860 SQMPTVIYV True PC9_epitope_Rep4 1036.5263181591597 1036.5252299358601 84.522 2 0.11129589342560729 0.0021622637961831344 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 123538 13909 VIIEKTYSL True PC9_epitope_Rep4 1064.61176203528 1064.6106699358602 61.405 2 0.11129434762523034 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 101295 22576 SLYANIDIL True PC9_epitope_Rep1 1020.5491617787198 1020.54806993586 91.645 2 0.11129365288794305 0.0021622637961831344 0.9438714419765777 ['ENST00000510102.5_1_6:43481178-43483845:-|nuORF', 'ENST00000460903.2_1_6:43483331-43484545:-|nuORF', 'ENST00000502714.1_1_6:43481208-43483845:-|nuORF', 'ENSG00000137207|ENST00000372422|YIPF3'] 32712 8871 GHSGPITSI True PC9_epitope_Rep3 867.4450310633501 867.44392993586 39.073 2 0.11128478502826154 0.0021622637961831344 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF', 'PRPF19|p.F388L|1|0.17|ENSG00000110107|chr11:60898250-60898250|A/G|missense_variant'] 113748 8611 TRDPAQRVVL True PC9_epitope_Rep5 1153.6567551650899 1153.65511490379 38.066 3 0.11128399948921844 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 54322 7266 KYQAVTATL True NCI_RA007_Epitope_Rep5 993.5494961318899 993.54838993586 34.624 2 0.11128276813405491 0.0021622637961831344 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'ENST00000478813.1_1_8:81177882-81177960:-|nuORF', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 113536 19741 TQVAIVNIL True PC9_epitope_Rep6 969.58588164061 969.58478993586 88.593 2 0.11126233326475174 0.0021622637961831344 0.9438714419765777 ['ENSG00000115084|ENST00000245680|SLC35F5'] 6216 5392 APRGDGVQVSA True PC9_epitope_Rep1 1055.5359713260698 1055.5348699358601 25.574 2 0.11125343458202802 0.0021622637961831344 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 11957 17294 DHTAPLLL True PC9_epitope_Rep2 878.48616759934 878.48506993586 71.78 2 0.11123236078786364 0.0021622637961831344 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 110324 21556 TIITTLENL True PC9_epitope_Rep4 1016.57537652656 1016.57426993586 91.095 2 0.11123023898085738 0.0021622637961831344 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 40083 17523 HRDDELYIL True PC9_epitope_Rep3 1172.5825871653199 1172.5814899358602 72.586 2 0.11122654429573568 0.0021622637961831344 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 84886 22621 QHSEIFWLL True PC9_epitope_Rep1 1171.60259433391 1171.6014899358602 91.821 2 0.11121932799347742 0.0021622637961831344 0.9438714419765777 ['ENST00000565925.5_1_16:81015450-81030931:-|nuORF', 'ENST00000569187.5_1_16:81015453-81040468:-|nuORF'] 11789 16259 DHIQITAL True PC9_epitope_Rep1 909.49198125577 909.49088993586 67.359 2 0.11121463826115957 0.0021622637961831344 0.9438714419765777 ['ENSG00000089723|ENST00000203664|OTUB2'] 41085 14317 HYLPDLHHL True PC9_epitope_Rep1 1143.5825275956702 1143.5808749037901 59.894 3 0.11121391751186165 0.0021622637961831344 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 138111 6995 YQHGGVTGL True PC9_epitope_Rep2 930.4559301002199 930.45482993586 32.304 2 0.11120938387552184 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1', 'ENST00000600689.1_1_19:18976320-18976969:+|nuORF'] 105438 11011 SVAPEFRRL True PC9_epitope_Rep5 1073.5981776598098 1073.5970899358601 47.343 2 0.11120449666118491 0.0021622637961831344 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 7667 4947 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep3 990.4618036426001 990.46070993586 24.123 2 0.11119981889025522 0.0021622637961831344 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 86802 12049 QRNPQGFVL True PC9_epitope_Rep4 1057.5668775315298 1057.56578993586 54.152 2 0.11119423644734298 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 96086 7484 SEDISHITP True H1975_Epitope_Rep3 997.47163973401 997.47054993586 33.768 2 0.11119412868049432 0.0021622637961831344 0.9438714419765777 ['ENSG00000138175|ENST00000260746|ARL3'] 27314 13275 FM[Oxidation]DPASALY True H1975_Epitope_Rep2 1029.44773386573 1029.4471749679299 56.191 1 0.11119354647450075 0.0021622637961831344 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 7493 13234 ASEDSVLLY True H1975_Epitope_Rep2 995.4811417885501 995.48004993586 56.034 2 0.11119045860887897 0.0021622637961831344 0.9438714419765777 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 4735 17242 ALDVVNLVY True H1975_Epitope_Rep2 1004.55424715916 1004.5536749679301 71.613 1 0.11117719236579918 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 74228 14125 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 59.486 2 0.11117436740306139 0.0021622637961831344 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 22245 10584 ETDNNIVVY True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 45.733 2 0.11117210869927385 0.0021622637961831344 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 125175 15266 VLQALEGLK True PC9_epitope_Rep5 969.5858816406098 969.58478993586 63.73 2 0.11117112153552251 0.0021622637961831344 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 108614 16171 TEIPEFPIA True H1975_Epitope_Rep2 1015.5226126777098 1015.52150993586 67.413 2 0.11116670315998313 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000154582|Q15369-2|ELOC', 'ENSG00000154582|ENST00000520242|ELOC'] 99509 4259 SLESINSR True NCI_RA007_Epitope_Rep5 904.46140940348 904.46030993586 22.951 2 0.11116134245095417 0.0021622637961831344 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 21667 16183 ERVPINDVL True PC9_epitope_Rep1 1053.58185888933 1053.5807699358602 67.062 2 0.11115868523288006 0.0021622637961831344 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 48005 13427 KAINVFVSA True PC9_epitope_Rep2 947.54401682863 947.54290993586 56.93 2 0.11115829225054794 0.0021622637961831344 0.9438714419765777 ['ENSG00000114209|ENST00000392750|PDCD10'] 105778 21393 SVIEQIVYV True PC9_epitope_Rep2 1048.580461907 1048.57936993586 87.759 2 0.11115816723363985 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 7521 13302 ASETGFLTY True H1975_Epitope_Rep2 987.4549270407099 987.4543749679301 56.296 1 0.11115357253353875 0.0021622637961831344 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 86628 7122 QREAEQSNVAL True PC9_epitope_Rep3 1243.61567819875 1243.61458993586 32.403 2 0.11115271662066062 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 64514 15780 LRAPPTLL True PC9_epitope_Rep5 879.55418758951 879.55308993586 65.691 2 0.11115043871367679 0.0021622637961831344 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN', 'nc|ENSG00000183963|P53814-2|SMTN'] 72449 12475 MTQDKVFRL True PC9_epitope_Rep5 1136.60121443492 1136.59957490379 52.983 3 0.11114953367926898 0.0021622637961831344 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2'] 44882 8724 IQDDAVHTL True PC9_epitope_Rep4 1010.50327421546 1010.50216993586 41.056 2 0.11114628907018055 0.0021622637961831344 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 35724 9944 GTSSLFIYK True NCI_RA007_Epitope_Rep3 1014.53859709502 1014.53750993586 46.196 2 0.11114457426058162 0.0021622637961831344 0.9438714419765777 ['ENSG00000179941|ENST00000650064|BBS10'] 132281 20109 VYLDKFIRL True PC9_epitope_Rep3 1165.68593003505 1165.68427490379 82.601 3 0.11113809084297716 0.0021622637961831344 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 49412 17536 KILPTLEAV True PC9_epitope_Rep2 982.60628273202 982.60518993586 72.721 2 0.11113747335459195 0.0021622637961831344 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 130935 13786 VVINFDFPK True NCI_RA007_Epitope_Rep4 1077.5858816406098 1077.58478993586 60.251 2 0.11113438223965764 0.0021622637961831344 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 132574 22505 VYPNWAIGL True PC9_epitope_Rep1 1031.5440168286298 1031.54290993586 91.367 2 0.11112069630674602 0.0021622637961831344 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 43514 22074 IIDDTIFNL True PC9_epitope_Rep4 1062.55972646242 1062.5586299358602 93.125 2 0.1111175387446431 0.0021622637961831344 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 1583 6286 AEFGQAESA True H1975_Epitope_Rep3 908.3875757568799 908.3870249679301 29.184 1 0.11111220604019566 0.0021622637961831344 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 73944 10819 NHLGGGAVVL True PC9_epitope_Rep4 935.51886470995 935.51776993586 49.374 2 0.11111076879223591 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 39740 9079 HPYFYAPE True H1975_Epitope_Rep3 1022.4497820906199 1022.44868993586 39.909 2 0.11109994959397257 0.0021622637961831344 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 54586 9930 LADALQELR True NCI_RA007_Epitope_Rep5 1027.56620882519 1027.5651099358602 44.839 2 0.11109877593411395 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 5469 11541 AMDPVSVSY True H1975_Epitope_Rep2 967.4320834211501 967.43098993586 49.452 2 0.1110953813923573 0.0021622637961831344 0.9438714419765777 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3', 'KLF3|p.V36Sfs*31|1|0.12|ENSG00000109787|chr4:38688630-38688630|G/-|frameshift_variant'] 74517 19295 NKTDVVLIL True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 79.023 2 0.11108857175243504 0.0021622637961831344 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'DAPK3|p.H350Pfs*78|1|0.75|ENSG00000167657|chr19:3959417-3959417|T/-|frameshift_variant', 'nc|ENSG00000167657|O43293-2|DAPK3'] 110012 11974 THTTPVLL True PC9_epitope_Rep1 880.5018176634799 880.50072993586 50.92 2 0.11108339850664897 0.0021622637961831344 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 40088 9781 HRDERVLSL True PC9_epitope_Rep1 1123.60980497267 1123.60816490379 42.484 3 0.11107838600143927 0.0021622637961831344 0.9438714419765777 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 73368 7198 NEQGSYVVA True H1975_Epitope_Rep3 965.4454249861698 965.44432993586 32.662 2 0.11105516190681444 0.0021622637961831344 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 61349 2622 LLEGEESR True NCI_RA007_Epitope_Rep5 931.4610750503099 931.45996993586 14.773 2 0.11105387544692792 0.0021622637961831344 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 872 5673 ADLDVSGPK True NCI_RA007_Epitope_Rep2 900.4552613938799 900.45416993586 26.68 2 0.11105153134605583 0.0021622637961831344 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 2492 14775 AEQPWPPLPA True H1975_Epitope_Rep2 1104.56039516876 1104.55928993586 61.991 2 0.11104987370651427 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 97801 12924 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 55.007 2 0.11103731612203517 0.0021622637961831344 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 154 11149 AADPSVVNL True H1975_Epitope_Rep2 884.46034677432 884.45924993586 47.922 2 0.1110199284897887 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 89663 4764 REVDPPM[Oxidation]GP True H1975_Epitope_Rep1 1012.4647809121999 1012.46368993586 23.383 2 0.11101734024583591 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 103328 17192 SQVDRLVALA True PC9_epitope_Rep2 1070.6084079903399 1070.60730993586 71.388 2 0.1110152830650488 0.0021622637961831344 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 139959 18187 YVIELQHVV True PC9_epitope_Rep4 1098.60734536118 1098.6062499358602 78.023 2 0.11100696147861142 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000470113.2_1_3:49135784-49136686:-|nuORF', 'ENST00000494984.5_1_3:49135981-49136101:-|nuORF'] 28392 11715 FSDVDSPYY True H1975_Epitope_Rep2 1091.44475627983 1091.44417496793 50.137 1 0.11100488899627405 0.0021622637961831344 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 17888 4926 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 24.03 3 0.11099893807371955 0.0021622637961831344 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 69368 21244 LVQDLLTQV True PC9_epitope_Rep3 1027.5913609438699 1027.59026993586 87.008 2 0.11099645141634115 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000174791|Q13671-2|RIN1', 'ENSG00000174791|ENST00000311320|RIN1', 'ENST00000526246.5_1_11:66099749-66102792:-|nuORF'] 1340 8018 AEEDIFNKP True H1975_Epitope_Rep1 1061.50293986229 1061.50184993586 35.785 2 0.11099341447312716 0.0021622637961831344 0.9438714419765777 ['ENSG00000174371|ENST00000366548|EXO1'] 48184 9484 KAVGSIAYL True H1975_Epitope_Rep3 920.5331177917599 920.53202993586 41.485 2 0.11099318487014292 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'nc|ENSG00000130164|P01130-6|LDLR', 'nc|ENSG00000130164|P01130-4|LDLR', 'ENST00000560173.1_1_19:11221401-11224126:+|nuORF'] 7259 7828 ARNTVTQVL True PC9_epitope_Rep6 1000.5665431783599 1000.56544993586 39.505 2 0.11099308729621982 0.0021622637961831344 0.9438714419765777 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000607039.1_1_1:112999611-113005178:+|nuORF'] 68397 4951 LTSVINQK True NCI_RA007_Epitope_Rep1 901.5232813840499 901.52218993586 23.342 2 0.11098616714106957 0.0021622637961831344 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 64535 8284 LRDEHNYTL True PC9_epitope_Rep5 1159.56218607391 1159.56055490379 36.803 3 0.11098421386996486 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 125328 10180 VLSDYDASY True H1975_Epitope_Rep3 1031.44475627983 1031.44417496793 44.202 1 0.11098095124872617 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant'] 46261 15787 ITDVIIGFQ True H1975_Epitope_Rep1 1004.5542471591598 1004.5536749679301 66.031 1 0.11096427731787406 0.0021622637961831344 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 31 4578 AAAAPLGAR True PC9_epitope_Rep5 796.4555361774 796.45442993586 22.671 2 0.11095642812599009 0.0021622637961831344 0.9438714419765777 ['ENST00000426838.8_1_18:42260239-42281192:+|nuORF'] 17587 17673 EHLQLISL True PC9_epitope_Rep6 951.5389314481899 951.53782993586 80.616 2 0.1109543059301989 0.0021622637961831344 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4'] 98096 15097 SHYTTPMVL True PC9_epitope_Rep5 1047.50591706775 1047.50480993586 63.078 2 0.11095355330947532 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 9956 8119 AYRQGHFTY True PC9_epitope_Rep3 1141.53049202281 1141.52884490379 36.206 3 0.11095288215628274 0.0021622637961831344 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 138938 14074 YSEGESLFY True H1975_Epitope_Rep2 1093.46040634397 1093.4598749679299 59.289 1 0.11094636157408258 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 6277 9337 APRPTIINA True PC9_epitope_Rep5 951.5501648382299 951.54906993586 40.868 2 0.11094583390207684 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 73154 8830 NEDLRSWTA True H1975_Epitope_Rep1 1090.50433684462 1090.50377496793 38.887 1 0.11094561013509661 0.0021622637961831344 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 43774 22954 IIYPGAFVDL True PC9_epitope_Rep3 1106.60119735158 1106.60010993586 93.557 2 0.11094375415413439 0.0021622637961831344 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 85977 9579 QPFSKPVSV True PC9_epitope_Rep4 987.5389314481899 987.53782993586 44.466 2 0.11092586523728706 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000285253|Q6N043-6|ZNF280D'] 18700 11348 ELDENLEY True H1975_Epitope_Rep2 1023.43967089939 1023.43907496793 48.699 1 0.11092292607973439 0.0021622637961831344 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 138895 4903 YSDVHNCSY True H1975_Epitope_Rep2 1086.40765957846 1086.40656993586 23.943 2 0.11091987530674717 0.0021622637961831344 0.9438714419765777 ['ENST00000557983.1_1_15:80423514-80429967:+|nuORF', 'nc|ENSG00000086666|Q6FIF0-2|ZFAND6', 'ENSG00000086666|ENST00000261749|ZFAND6'] 128897 10405 VSTEVDARL True PC9_epitope_Rep3 988.5189242795998 988.51782993586 44.963 2 0.11091734817609429 0.0021622637961831344 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 119387 10874 VENSYSISV True H1975_Epitope_Rep3 996.47639076128 996.47584496793 46.909 1 0.11091625846269623 0.0021622637961831344 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF', 'ENST00000488923.1_1_2:242186148-242186740:-|nuORF'] 1700 5601 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41284496793 26.546 1 0.11090950189257139 0.0021622637961831344 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 72894 20764 NAVVELVTV True PC9_epitope_Rep1 942.5385970950199 942.53750993586 84.696 2 0.1108853171818443 0.0021622637961831344 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 131809 19847 VYAPPVGGF True PC9_epitope_Rep1 905.4647038787698 905.46360993586 81.158 2 0.11088412152365268 0.0021622637961831344 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 82136 10942 PTDGPPNSFY True H1975_Epitope_Rep2 1093.47163973401 1093.4705499358602 47.122 2 0.11086956324991609 0.0021925016443762333 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 75265 13762 NPNQYNYIA True PC9_epitope_Rep1 1095.49852318819 1095.49742993586 57.78 2 0.11086344163280593 0.0021925016443762333 0.9438714419765777 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 96185 11878 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.45890993586 50.769 2 0.11085556382962679 0.0021925016443762333 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 7425 9043 ASDAAPLQY True H1975_Epitope_Rep1 934.43961132974 934.4390649679301 39.691 1 0.11083868948615727 0.0021925016443762333 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 109997 8767 THTPSGLTV True PC9_epitope_Rep1 911.47124581119 911.47014993586 38.561 2 0.11083446353026645 0.0021925016443762333 0.9438714419765777 ['ENSG00000116685|ENST00000376572|KIAA2013', 'nc|ENSG00000116685|Q8IYS2-2|KIAA2013'] 102341 4965 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 26.675 2 0.11083188390544857 0.0021925016443762333 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 85182 17801 QKDSLVINI True PC9_epitope_Rep5 1028.5866099165999 1028.58550993586 73.491 2 0.11083122299161104 0.0021925016443762333 0.9438714419765777 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 6835 19018 AQIDHYLGL True PC9_epitope_Rep5 1028.52909504048 1028.52857496793 78.178 1 0.11082330487885152 0.0021925016443762333 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4', 'ENST00000485749.1_1_2:55200294-55201100:-|nuORF'] 38869 18742 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 76.88 2 0.11082127187604521 0.0021925016443762333 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 4661 14245 ALDAAVLAY True H1975_Epitope_Rep2 905.4858332461699 905.48528496793 59.942 1 0.1108175037177191 0.0021925016443762333 0.9438714419765777 ['ENSG00000146281|ENST00000275072|PM20D2'] 117846 10033 VAPEEHPVLL True NCI_RA007_Epitope_Rep1 1102.60225998074 1102.60116993586 43.035 2 0.11081687963641 0.0021925016443762333 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 95081 12402 RYSSMAASF True PC9_epitope_Rep5 1018.4542158480599 1018.45310993586 52.702 2 0.11081662560351184 0.0021925016443762333 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 113713 10195 TRDETNYGIP True PC9_epitope_Rep4 1164.5411162761598 1164.54000993586 46.892 2 0.1108152946944542 0.0021925016443762333 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 1716 11692 AEGPVAVVV True H1975_Epitope_Rep2 839.4752685624699 839.47472496793 50.048 1 0.11081514195835038 0.0021925016443762333 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 100235 23242 SLLPAIVEL True PC9_epitope_Rep5 953.57973363101 953.57862993586 94.384 2 0.11081334879377111 0.0021925016443762333 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 96081 12596 SEDFSPLSP True H1975_Epitope_Rep2 977.43419159613 977.43364496793 53.548 1 0.11081278532941323 0.0021925016443762333 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000511829.5_1_5:79738958-79744113:+|nuORF'] 48644 5841 KEKLIAPVA True NCI_RA007_Epitope_Rep4 967.6066170851898 967.60552993586 29.092 2 0.11079890032050495 0.002214597629444791 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000544151.1_1_12:21807353-21810687:-|nuORF'] 28104 13120 FREDSTLAL True PC9_epitope_Rep6 1050.53457434374 1050.53346993586 62.095 2 0.1107932665870758 0.002214597629444791 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671'] 26748 20889 FLDGNEMTL True PC9_epitope_Rep2 1038.46919720586 1038.46867496793 85.793 1 0.11079182941543192 0.002214597629444791 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 113989 19489 TRLPEFSEL True PC9_epitope_Rep3 1090.56587447202 1090.56476993586 80.196 2 0.11078703925477966 0.002214597629444791 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 18758 12032 ELDPNNAVYY True H1975_Epitope_Rep3 1196.53496826656 1196.5338699358601 51.442 2 0.11078428447337493 0.002214597629444791 0.9438714419765777 ['ENSG00000197860|ENST00000381007|SGTB'] 83967 20371 QELLYVVPFVA True H1975_Epitope_Rep2 1276.70672504928 1276.70562993586 84.416 2 0.11078370252251155 0.002214597629444791 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 3066 12252 AGAEGFVRV True PC9_epitope_Rep1 904.4766655447999 904.47556993586 51.987 2 0.11078327198958615 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 3253 6169 AGFAGDDAPR True PC9_epitope_Rep5 975.4410083120698 975.43990993586 28.714 2 0.11077815898487922 0.002214597629444791 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 54600 8670 LADDSVRSL True PC9_epitope_Rep6 974.50327421546 974.50216993586 43.193 2 0.11077474468187175 0.002214597629444791 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 125739 21179 VNFEFPEFQL True NCI_RA007_Epitope_Rep1 1268.6077392839998 1268.60664993586 86.651 2 0.11076885961365264 0.002214597629444791 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF', 'ENST00000426405.1_1_X:73629614-73629932:+|nuORF'] 37460 18778 GYADIVQLL True NCI_RA007_Epitope_Rep4 990.5385970950199 990.5380449679301 81.242 1 0.11076503280167936 0.002214597629444791 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 2178 11717 AEMSTPLSV True H1975_Epitope_Rep2 933.44773348529 933.44662993586 50.144 2 0.11075410994200181 0.002214597629444791 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1'] 75261 7268 NPNQYHYVA True PC9_epitope_Rep1 1104.49885754136 1104.49776993586 32.769 2 0.11075344420040069 0.002214597629444791 0.9438714419765777 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A', 'ATP11A-CUL4A|1|fusion', 'ATP11A-CUL4A|2|fusion'] 22988 15645 EVINTVAQV True PC9_epitope_Rep5 971.52876068731 971.52766993586 65.19 2 0.11074742110177992 0.002214597629444791 0.9438714419765777 ['ENSG00000143753|ENST00000323699|DEGS1'] 35807 21262 GTYDIFYTA True PC9_epitope_Rep5 1049.47057710485 1049.47007496793 86.835 1 0.1107362124571383 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 94937 10223 RYPDSHQLF True PC9_epitope_Rep4 1161.55670677065 1161.5550749037902 47.0 3 0.11071241447430856 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 35045 7689 GRDENSVEL True PC9_epitope_Rep5 1017.4727023631699 1017.47160993586 34.519 2 0.11071181648267912 0.002214597629444791 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 42096 11078 IEELEAVEA True H1975_Epitope_Rep2 1001.4917064722499 1001.4911749679301 47.644 1 0.11071173094696772 0.002214597629444791 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 46258 9815 ITDVDNGYY True H1975_Epitope_Rep2 1058.4556553167 1058.45454993586 42.737 2 0.11070916730573205 0.002214597629444791 0.9438714419765777 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 97723 14921 SHFEGLITT True PC9_epitope_Rep5 1003.49746055903 1003.49636993586 62.398 2 0.11070886594583637 0.002214597629444791 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 37216 22224 GVVDIFQTV True PC9_epitope_Rep3 976.52294703088 976.52184993586 90.769 2 0.11069615071085007 0.002214597629444791 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 11974 20255 DHTVGFIL True PC9_epitope_Rep3 900.4705175351999 900.46942993586 83.171 2 0.11069601976639447 0.002214597629444791 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 78182 8700 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 38.304 2 0.11069600865708185 0.002214597629444791 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 25885 15661 FGIDRDAIAQA True PC9_epitope_Rep5 1175.59348620219 1175.5923899358602 65.252 2 0.11068697037469634 0.002214597629444791 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53259774-53260053:-|nuORF'] 42961 7139 IGAEVYHNLK True PC9_epitope_Rep2 1142.60840799034 1142.6067749037902 32.853 3 0.11068566856071375 0.002214597629444791 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 6838 20246 AQIDQYVGL True PC9_epitope_Rep5 1005.5131106231698 1005.51200993586 82.925 2 0.11068551775903394 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000125744|O75298-2|RTN2', 'ENSG00000125744|ENST00000245923|RTN2', 'ENST00000591789.1_1_19:45989311-45991830:-|nuORF', 'ENST00000593187.5_1_19:45988968-45991824:-|nuORF', 'ENST00000593129.1_1_19:45988968-45992276:-|nuORF', 'nc|ENSG00000125744|O75298-3|RTN2'] 74431 13802 NIVPVIAKA True PC9_epitope_Rep3 923.5804023373499 923.57930993586 58.166 2 0.11068535925731 0.002214597629444791 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 91649 9901 RPFQGTMGV True PC9_epitope_Rep6 991.4909357099498 991.48982993586 48.589 2 0.11068180833770183 0.002214597629444791 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 75473 14965 NQIKEFIYA True PC9_epitope_Rep4 1124.5866099165999 1124.58550993586 65.501 2 0.11067857720520674 0.002214597629444791 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 103569 15124 SRDEYYHLL True PC9_epitope_Rep3 1194.56693710118 1194.56530490379 63.312 3 0.11067658382892942 0.002214597629444791 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 86171 5094 QPSQPVTSA True PC9_epitope_Rep5 913.4505103666099 913.44940993586 24.619 2 0.11067469733724468 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 140333 11257 YYEEQHPEL True PC9_epitope_Rep5 1206.5193182024198 1206.51822993586 48.29 2 0.11066361732211857 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 29086 11430 FTQGHIVEV True PC9_epitope_Rep2 1028.52909504048 1028.5279899358602 49.285 2 0.11066259063449338 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 109961 9116 THSLETQEL True PC9_epitope_Rep5 1056.5087535187201 1056.5076499358602 40.01 2 0.110661900224324 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 104308 16633 SSELFTLTY True H1975_Epitope_Rep3 1059.51244191683 1059.51187496793 69.488 1 0.11065595773885446 0.002214597629444791 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 133041 19063 VYVSDIQEL True PC9_epitope_Rep4 1064.5389910178399 1064.5378899358602 81.416 2 0.11065025957463605 0.002214597629444791 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 38820 6972 HIDVGGHMY True H1975_Epitope_Rep2 1027.45455020123 1027.4534499358601 31.739 2 0.110641775817023 0.002214597629444791 0.9438714419765777 ['ENSG00000134504|ENST00000580059|KCTD1', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15'] 108224 6958 TEAEIAHIA True H1975_Epitope_Rep3 953.4818104948898 953.48070993586 31.725 2 0.11063509697862861 0.002214597629444791 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1'] 140199 13732 YVYPDERTAL True PC9_epitope_Rep2 1225.59790287629 1225.5968099358602 58.109 2 0.11063189145814473 0.002214597629444791 0.9438714419765777 ['ENSG00000145391|ENST00000274031|SETD7'] 82119 16977 PTDAFTVFY True H1975_Epitope_Rep1 1059.49131254943 1059.49020993586 70.725 2 0.11062866130885234 0.002214597629444791 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 76960 21099 NVPEGLLATV True PC9_epitope_Rep5 1011.56006081559 1011.55896993586 86.222 2 0.11061869489362898 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 132535 19287 VYPGDPLRF True PC9_epitope_Rep5 1062.5498304850598 1062.5487299358601 79.231 2 0.11061827077378318 0.002214597629444791 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 45241 15464 IRPENVIIY True PC9_epitope_Rep4 1115.6338944621898 1115.63278993586 67.411 2 0.11061818590246905 0.002214597629444791 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 22585 7114 ETPALTINR True H1975_Epitope_Rep3 1013.55055876105 1013.54946993586 32.334 2 0.11061376161642392 0.002214597629444791 0.9438714419765777 ['ENSG00000167315|ENST00000285093|ACAA2', 'ENST00000419045.1_1_X:48635274-48635379:-|nuORF'] 21708 9443 ERYKEVAEL True PC9_epitope_Rep5 1135.5873381925899 1135.58569490379 41.278 3 0.11060912079888191 0.002214597629444791 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 8124 9356 ATETQPIVY True H1975_Epitope_Rep1 1020.5127762699997 1020.51227496793 40.895 1 0.11060886321930549 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 102958 22864 SQIPFPLSL True PC9_epitope_Rep2 1000.5593325396 1000.55877496793 93.436 1 0.11059951486325774 0.002214597629444791 0.9438714419765777 ['ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 118816 8051 VEEFKSIPA True H1975_Epitope_Rep2 1018.5335117145798 1018.53240993586 35.917 2 0.11059115038403829 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'ENST00000493695.1_1_3:160132272-160134257:+|nuORF'] 18701 11358 ELDENLEY True H1975_Epitope_Rep2 1023.43967089939 1023.4385699358601 48.737 2 0.11058579659839493 0.002214597629444791 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 37750 11981 HAVGDIPGV True PC9_epitope_Rep5 863.45011644379 863.44900993586 51.081 2 0.11056649752477742 0.002214597629444791 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 32576 14602 GHAEVVNLL True PC9_epitope_Rep4 950.5185303567799 950.51742993586 64.094 2 0.11056010338088154 0.002214597629444791 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2'] 1803 12482 AEIDAHLVALA True H1975_Epitope_Rep3 1121.60807363717 1121.6069699358602 53.205 2 0.11055956339489087 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 106181 8969 SVPEGPWWRK True NCI_RA007_Epitope_Rep5 1240.63529144452 1240.6336349037902 41.157 3 0.1105583090083115 0.002214597629444791 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 130818 20727 VVFEIQGTTV True PC9_epitope_Rep5 1091.58627556343 1091.5851699358602 84.785 2 0.11055678557977518 0.002214597629444791 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 33184 13947 GKVQIPIML True NCI_RA007_Epitope_Rep4 997.5994235297699 997.59832993586 60.923 2 0.11055368067061518 0.002214597629444791 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 30165 18694 FYSNIQTVI True PC9_epitope_Rep6 1083.5600608155898 1083.5589699358602 84.549 2 0.11055288794732189 0.002214597629444791 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 21135 19583 ERDRLILFL True PC9_epitope_Rep4 1173.6869926642098 1173.6858899358601 83.448 2 0.11053744771975013 0.002214597629444791 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 1058 9936 AEAIRILAA True H1975_Epitope_Rep2 926.5549158654999 926.55380993586 43.207 2 0.11051429260418351 0.002214597629444791 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 22728 10358 ETYNGHLVSC True PC9_epitope_Rep5 1121.48115887189 1121.48006993586 44.826 2 0.11051332861774768 0.002214597629444791 0.9438714419765777 ['ENSG00000130520|ENST00000593829|LSM4', 'ENST00000593564.2_1_19:18423080-18433830:-|nuORF'] 31529 13999 GEFGGFGSV True NCI_RA007_Epitope_Rep1 855.3762827971899 855.37573496793 58.48 1 0.11051307154983334 0.002214597629444791 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 31878 5333 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.4390649679301 25.567 1 0.11050457694190206 0.002214597629444791 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 103451 16373 SRAGLQFPV True PC9_epitope_Rep1 973.53451477409 973.53340993586 67.801 2 0.11049451065877422 0.002214597629444791 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC4|p.R30Q|1|0.07|ENSG00000278463|chr6:26033480-26033480|C/T|missense_variant', 'H2AC13|p.R30P|1|0.16|ENSG00000196747|chr6:27808298-27808298|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 25310 7177 FEELDRPAA True H1975_Epitope_Rep2 1046.50327421546 1046.5021699358601 32.541 2 0.11049007626049254 0.002214597629444791 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 17328 13435 EHDPSSIYL True PC9_epitope_Rep2 1059.48728979815 1059.48618993586 56.96 2 0.11047363586735415 0.002214597629444791 0.9438714419765777 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 102314 6765 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48104993586 30.827 2 0.11046663450346347 0.002214597629444791 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 42809 18316 IFIQNSKLYF True PC9_epitope_Rep6 1271.69140933831 1271.6903099358601 83.094 2 0.1104620422972509 0.002214597629444791 0.9438714419765777 ['ENSG00000138459|ENST00000492406|SLC35A5'] 123130 9774 VHDETCQVI True PC9_epitope_Rep5 1042.47534521546 1042.4742499358601 42.568 2 0.11045462584232886 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000166750|Q08AF3-2|SLFN5', 'SLFN5|p.A869Pfs*19|1|0.14|ENSG00000166750|chr17:35265814-35265814|G/-|frameshift_variant', 'ENSG00000166750|ENST00000299977|SLFN5'] 4089 12761 AHSNLASVL True PC9_epitope_Rep5 910.4872302285 910.48612993586 54.092 2 0.11045269776827449 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 56784 14400 LEATINELV True H1975_Epitope_Rep1 1000.5440763982799 1000.54357496793 60.586 1 0.11045263222195571 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 26779 4401 FLDSKHPGHY True H1975_Epitope_Rep2 1199.57235683479 1199.57071490379 22.038 3 0.11045211659862604 0.002214597629444791 0.9438714419765777 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant'] 94530 17451 RYIFAKNLF True PC9_epitope_Rep4 1170.6549642599398 1170.65386993586 75.122 2 0.1104486311542294 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 29620 22900 FVLPELPSV True PC9_epitope_Rep1 999.56408356687 999.5635749679301 92.882 1 0.11043894440106912 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 81289 10985 PPQGQFLPP True NCI_RA007_Epitope_Rep4 979.5127167003499 979.51160993586 49.122 2 0.11043858934805191 0.002214597629444791 0.9438714419765777 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF'] 7879 7222 ATAPPAPAY True NCI_RA007_Epitope_Rep4 857.42831837005 857.4272299358599 34.413 2 0.11042987422858962 0.002214597629444791 0.9438714419765777 ['ENSG00000135837|ENST00000367607|CEP350'] 20994 5540 ERAPGETAL True PC9_epitope_Rep2 942.4770594676199 942.47596993586 26.701 2 0.11042809619190824 0.002214597629444791 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 103440 6909 SRAAEKLYL True PC9_epitope_Rep6 1049.58694426977 1049.58584993586 35.495 2 0.11042596936541933 0.002214597629444791 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 119842 6281 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51676993586 29.167 2 0.11042350402486699 0.002214597629444791 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 104335 13196 SSEQTFMYY True H1975_Epitope_Rep3 1154.4590264449798 1154.45847496793 56.012 1 0.11042234544413367 0.002214597629444791 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 4168 6288 AIAQAESLRYK True NCI_RA007_Epitope_Rep2 1248.6826355597598 1248.68098490379 29.065 3 0.11041632349463087 0.002214597629444791 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF', 'ENST00000487417.1_1_12:62415587-62415818:-|nuORF'] 48204 15849 KAYTSQFVSL True PC9_epitope_Rep2 1142.5971746003 1142.5960699358602 66.222 2 0.11041518118374409 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 28189 12226 FRPLYTHEY True PC9_epitope_Rep5 1224.5927579261997 1224.5916699358602 52.015 2 0.11041516626652344 0.002214597629444791 0.9438714419765777 ['ENSG00000008952|ENST00000337002|SEC62'] 10073 6515 AYVHM[Oxidation]VTHF True NCI_RA007_Epitope_Rep1 1119.5171508382302 1119.51604993586 29.357 2 0.11041216895920627 0.002214597629444791 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 105466 6911 SVASISLTK True NCI_RA007_Epitope_Rep5 904.52294703088 904.52184993586 33.269 2 0.11040975197999264 0.002214597629444791 0.9438714419765777 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 136694 21446 YIGPVLVSV True PC9_epitope_Rep3 945.55351888317 945.55242993586 87.783 2 0.11040315610302706 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 8869 13661 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6965849037902 57.57 3 0.11040144003663943 0.002214597629444791 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 81763 3809 PSDPKQYRY True H1975_Epitope_Rep2 1152.5563724174801 1152.55471490379 19.669 3 0.11039789345809461 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC', 'NRDC|p.M396Kfs*40|1|0.13|ENSG00000078618|chr1:51825340-51825341|-/TT|frameshift_variant', 'ENST00000491410.1_1_1:52305873-52344287:-|nuORF'] 76176 10355 NRSNTVVIM True PC9_epitope_Rep5 1032.53861417836 1032.53750993586 44.815 2 0.11039489171700886 0.002214597629444791 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 88021 6111 QVSPEAGVQKV True PC9_epitope_Rep6 1140.6138872935999 1140.61278993586 31.912 2 0.1103864760912725 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 96188 11676 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 49.984 1 0.11037951082352804 0.002214597629444791 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 47244 10362 IYEGYALPH True NCI_RA007_Epitope_Rep1 1061.5181960036098 1061.5170899358602 44.29 2 0.11037724735316162 0.002214597629444791 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 29242 16311 FVDEPLIHATT True PC9_epitope_Rep5 1241.6292030045697 1241.62810993586 67.736 2 0.11036150806528265 0.002214597629444791 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 56 12762 AAAGSPVFL True H1975_Epitope_Rep1 831.44905381463 831.44850496793 54.149 1 0.11036146143842439 0.002214597629444791 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 39845 9957 HQGPATTVAF True PC9_epitope_Rep2 1027.50869394907 1027.50758993586 43.63 2 0.11035812779433643 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 130679 14533 VVDEIFNEY True H1975_Epitope_Rep1 1126.51825557326 1126.51767496793 61.107 1 0.1103566525951439 0.002214597629444791 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 21224 19191 ERFNVPVSL True PC9_epitope_Rep5 1059.5712942056298 1059.57077496793 78.857 1 0.11035565882473289 0.002214597629444791 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 132399 17943 VYNENLVHMI True PC9_epitope_Rep4 1230.60669373818 1230.60558993586 77.068 2 0.11035260093474852 0.002214597629444791 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 54314 20878 KYPSPFFVF True PC9_epitope_Rep4 1130.5800679841798 1130.5794749679299 88.463 1 0.11034861404215154 0.002214597629444791 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 84631 12155 QHDPYITSI True PC9_epitope_Rep4 1072.5189242796 1072.5178299358602 54.572 2 0.11034384184345788 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 95356 7980 SAHDQSLVL True NCI_RA007_Epitope_Rep4 968.4927095317599 968.49160993586 37.453 2 0.11034305475019647 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3', 'ENST00000491769.1_1_2:238233419-238250825:-|nuORF'] 119833 6174 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51731496793 28.817 1 0.1103420762350941 0.002214597629444791 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 960 4855 AEAAAEAAATA True H1975_Epitope_Rep3 945.44033960573 945.43924993586 23.801 2 0.11034131132462867 0.002214597629444791 0.9438714419765777 ['ENST00000242719.3_1_1:51701983-51702103:+|nuORF'] 138333 16845 YRAPEVLL True PC9_epitope_Rep5 959.5440168286299 959.54290993586 69.803 2 0.1103347292411834 0.002214597629444791 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 47436 12123 IYIKQIKTF True PC9_epitope_Rep4 1152.6906810623198 1152.6890249037901 54.44 3 0.11032743396840512 0.002214597629444791 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 24588 21747 FAMEIDPSL True PC9_epitope_Rep1 1021.4790336135699 1021.47792993586 88.483 2 0.11032271468642797 0.002214597629444791 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 106983 17454 SYLERHGLINF True PC9_epitope_Rep2 1347.6935345966297 1347.69187490379 72.388 3 0.11032167157029117 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 137184 14754 YLDSIPPGQYM True H1975_Epitope_Rep2 1282.5903749677 1282.58926993586 61.911 2 0.11032030002364485 0.002214597629444791 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 102161 12845 SPRPPLISV True PC9_epitope_Rep6 964.57056592964 964.56946993586 60.92 2 0.11031233477631382 0.002214597629444791 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 61975 16530 LLLPGELAK True PC9_epitope_Rep2 952.5957180483199 952.59462993586 68.822 2 0.11030795463488045 0.002214597629444791 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 76908 18248 NVLEIVQKV True PC9_epitope_Rep4 1040.62299542532 1040.62188993586 78.261 2 0.11029833109377854 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000125247|Q5T4D3-4|TMTC4', 'nc|ENSG00000125247|Q5T4D3|TMTC4', 'ENSG00000125247|ENST00000342624|TMTC4', 'nc|ENSG00000125247|Q5T4D3-2|TMTC4', 'ENST00000462211.5_1_13:101277731-101294530:-|nuORF'] 8058 12351 ATDYTFAM[Oxidation]Y True H1975_Epitope_Rep2 1097.43756310485 1097.43697496793 52.593 1 0.11029433211941263 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'FOXP4-CCND3|5|fusion', 'FOXP4-CCND3|1|fusion', 'FOXP4-CCND3|3|fusion', 'FOXP4-CCND3|2|fusion', 'FOXP4-CCND3|4|fusion', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 45986 17421 ISTEVGITNV True PC9_epitope_Rep1 1031.54989005471 1031.54937496793 71.806 1 0.11028993599348513 0.002214597629444791 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 71428 23748 M[Oxidation]IPLLLAAL True PC9_epitope_Rep3 969.5932759006099 969.5921699358599 96.632 2 0.11028907912652149 0.002214597629444791 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 35577 13380 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 63.134 2 0.1102871472224597 0.002214597629444791 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 6670 7952 AQAPDLQRV True PC9_epitope_Rep2 996.5352430500799 996.53414993586 35.951 2 0.1102827822972249 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 30258 8529 GAAKDLPGV True PC9_epitope_Rep1 826.4548674710599 826.45376993586 37.644 2 0.11027350102021839 0.002214597629444791 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 130298 6421 VTTGGMVLK True NCI_RA007_Epitope_Rep4 904.5051887917599 904.50408993586 31.299 2 0.11026677342813401 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000173369|P02746|C1QB', 'ENSG00000173369|ENST00000509305|C1QB'] 116228 23380 TVTTVILEV True PC9_epitope_Rep2 973.5695628701299 973.56846993586 95.406 2 0.1102663965944362 0.002214597629444791 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 34556 20533 GQFGVGFYSA True PC9_epitope_Rep3 1031.4712458111896 1031.47014993586 84.243 2 0.11026541694711724 0.002214597629444791 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 40086 14410 HRDDELYIL True PC9_epitope_Rep6 1172.5825871653199 1172.5814899358602 67.325 2 0.11026381881308073 0.002214597629444791 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 112306 7940 TMDNPTTTQY True H1975_Epitope_Rep3 1170.48630382198 1170.48577496793 35.51 1 0.11026003060798746 0.002214597629444791 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 7136 9715 AQYEHDLEV True PC9_epitope_Rep6 1102.4931034545798 1102.49200993586 47.769 2 0.11025552747405122 0.002214597629444791 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 119943 9938 VEYEVPEAA True H1975_Epitope_Rep2 1005.4654917244097 1005.46438993586 43.215 2 0.11025539551479545 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 78187 8263 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 37.144 2 0.11025503775401412 0.002214597629444791 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 3254 6266 AGFAGDDAPR True PC9_epitope_Rep5 975.4410083120698 975.43990993586 29.079 2 0.11025475949877413 0.002214597629444791 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 57854 11721 LEQEADLIEA True H1975_Epitope_Rep2 1129.55028397753 1129.54918993586 50.161 2 0.11025180614103032 0.002214597629444791 0.9438714419765777 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-3|ANKLE2'] 37495 12858 GYFGNPQKF True PC9_epitope_Rep4 1056.50288029264 1056.5017899358602 57.326 2 0.11024945695021059 0.002214597629444791 0.9438714419765777 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 97988 20080 SHSFVVNIL True PC9_epitope_Rep3 1014.5498304850599 1014.54872993586 82.489 2 0.11024715544684316 0.002214597629444791 0.9438714419765777 ['ENSG00000104549|ENST00000265896|SQLE', 'ENST00000518604.1_1_8:126030245-126031031:+|nuORF'] 103788 16281 SRFPYYNSL True PC9_epitope_Rep4 1145.55055876105 1145.54946993586 70.582 2 0.11023745883109463 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-4|DENND3', 'ENST00000518198.1_1_8:142138775-142151424:+|nuORF'] 128372 13431 VSDPVGVLY True H1975_Epitope_Rep3 947.49639792987 947.4958449679301 56.934 1 0.11023593892668858 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 76479 13983 NTDFGDEFY True H1975_Epitope_Rep3 1106.4192698079798 1106.41816993586 59.104 2 0.11023187699914717 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 109199 8735 TFSVVPSPK True NCI_RA007_Epitope_Rep1 960.5280324113198 960.52692993586 37.979 2 0.11023085600970291 0.002214597629444791 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 95077 12545 RYSSMAASF True PC9_epitope_Rep1 1018.4542158480599 1018.45310993586 53.124 2 0.11022939944831547 0.002214597629444791 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 39507 8053 HPDYNNEL True PC9_epitope_Rep1 1000.4250238947601 1000.42392993586 35.798 2 0.11022861418787978 0.002214597629444791 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 87103 6191 QSEVESTEY True H1975_Epitope_Rep2 1070.44039917538 1070.4393099358601 28.786 2 0.11022221837303056 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 33587 20395 GLLAVLRPL True PC9_epitope_Rep3 950.6276868829399 950.62658993586 83.7 2 0.11021475306562879 0.0022306423027562182 0.9438714419765777 ['ENSG00000168569|ENST00000307366|TMEM223'] 70933 15055 MELITPISA True H1975_Epitope_Rep3 973.5154191222899 973.51487496793 63.302 1 0.1102133459691806 0.0022306423027562182 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 63285 6667 LPASNLAGKEA True PC9_epitope_Rep4 1069.57677350889 1069.57566993586 32.819 2 0.11021178629850989 0.0022306423027562182 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 75530 21890 NQLDSLMGL True PC9_epitope_Rep2 989.48518162317 989.4846349679301 89.676 1 0.11021037422985762 0.0022306423027562182 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 33202 18281 GLAAGGIVAV True PC9_epitope_Rep4 826.4912529797799 826.49014993586 78.388 2 0.11020466128814561 0.0022306423027562182 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 102521 16819 SQADVIPAV True PC9_epitope_Rep2 898.4759968384599 898.47488993586 69.943 2 0.11019342638022706 0.0022306423027562182 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 43476 19809 IHVDFPVIL True PC9_epitope_Rep6 1051.60661708519 1051.6055299358602 88.853 2 0.11019241069151463 0.0022306423027562182 0.9438714419765777 ['ENST00000454201.5_1_3:50363554-50364527:-|nuORF', 'ENST00000421918.1_1_3:50363554-50364574:-|nuORF', 'ENSG00000114383|ENST00000232496|TUSC2'] 11916 12375 DHSGQVTIL True PC9_epitope_Rep2 968.49270953176 968.49160993586 52.911 2 0.11019066781961911 0.0022306423027562182 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 14973 19603 DYSPYFKTI True PC9_epitope_Rep1 1132.5440763982801 1132.5429699358601 80.23 2 0.11018828379657691 0.0022306423027562182 0.9438714419765777 ['ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__Q6IFX2'] 54441 16324 KYTKIFNDF True PC9_epitope_Rep3 1174.60225998074 1174.60116993586 67.926 2 0.11018022467640363 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 134415 15324 WTDLALQY True H1975_Epitope_Rep2 1008.4916469026 1008.49054993586 64.101 2 0.11017988399490825 0.0022306423027562182 0.9438714419765777 ['ANAPC13|p.M55I|1|0.22|ENSG00000129055|chr3:134478650-134478650|C/T|missense_variant', 'ENSG00000129055|ENST00000354910|ANAPC13'] 127145 9935 VQDNPRALV True PC9_epitope_Rep5 1010.5508931142199 1010.54978993586 43.188 2 0.1101736323585939 0.0022306423027562182 0.9438714419765777 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89', 'KLHL24-CEP89|1|fusion'] 115803 15489 TVMDEIHTV True PC9_epitope_Rep1 1043.49574630687 1043.49464993586 64.4 2 0.11017173828366308 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 95175 17025 SAAFPGASL True PC9_epitope_Rep4 819.41266830591 819.41156993586 73.48 2 0.11016950602576389 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 100441 12784 SLPEELQKC True PC9_epitope_Rep5 1045.51139637101 1045.51028993586 54.185 2 0.110165309794066 0.0022306423027562182 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 102727 13927 SQDVTTVTL True PC9_epitope_Rep6 962.4920408254201 962.49094993586 65.411 2 0.1101641195525057 0.0022306423027562182 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 70378 14764 LYQEIIHYF True NCI_RA007_Epitope_Rep3 1224.61791004488 1224.6168099358601 65.49 2 0.11015937557400116 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 108432 8144 TEEGYVPTA True H1975_Epitope_Rep3 965.4341915961298 965.43364496793 36.303 1 0.1101563793739932 0.0022306423027562182 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 7202 15308 ARDFTVSAL True PC9_epitope_Rep1 978.5134449763399 978.51234993586 63.703 2 0.11015150229481377 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 109508 12795 THAAQQILL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 54.236 2 0.11015013682791179 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 96254 9001 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 39.618 1 0.11014626689560506 0.0022306423027562182 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 126739 18304 VPSAVLIVA True PC9_epitope_Rep6 867.5429541994699 867.5424049679301 83.05 1 0.11014050367830874 0.0022306423027562182 0.9438714419765777 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000294119.6_1_11:62444064-62444232:-|nuORF'] 138757 13528 YSDAFLNDSY True H1975_Epitope_Rep1 1193.48768372097 1193.4865899358601 57.157 2 0.1101390920521794 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 9122 12508 AVLPQTRYV True PC9_epitope_Rep2 1045.59202965021 1045.59092993586 53.421 2 0.11013513569424695 0.0022306423027562182 0.9438714419765777 ['ADAM9-HTRA4|1|fusion', 'nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 11067 5698 DDSPDLPK True NCI_RA007_Epitope_Rep2 885.40797684829 885.40686993586 26.779 2 0.11013207310931794 0.0022306423027562182 0.9438714419765777 ['CON__P02769'] 20754 20594 EQLGTFTTL True PC9_epitope_Rep5 1008.51277627 1008.51227496793 84.261 1 0.11012548486424206 0.0022306423027562182 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 106664 23059 SYADQMFLL True PC9_epitope_Rep5 1086.50558271458 1086.5050749679299 93.684 1 0.11011962286349261 0.0022306423027562182 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 1341 8178 AEEDIFNKP True H1975_Epitope_Rep3 1061.50293986229 1061.50184993586 36.436 2 0.11011917468202065 0.0022306423027562182 0.9438714419765777 ['ENSG00000174371|ENST00000366548|EXO1'] 38928 20900 HIPDVITYL True PC9_epitope_Rep1 1069.58079626017 1069.5796899358602 85.213 2 0.11011770165699787 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 47942 19351 IYYVDVQKF True PC9_epitope_Rep5 1173.6070110080097 1173.6059099358602 79.48 2 0.11011398108496402 0.0022306423027562182 0.9438714419765777 ['ENSG00000160410|ENST00000291842|SHKBP1'] 138400 5846 YRDPTTVTT True PC9_epitope_Rep4 1052.51383889916 1052.51274993586 29.357 2 0.11009975842490255 0.0022306423027562182 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 48553 4452 KEGKPPISV True H1975_Epitope_Rep3 953.5545815123298 953.55348993586 22.247 2 0.11009879940909238 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 87391 19702 QTDPTLLSV True PC9_epitope_Rep1 972.5127762699999 972.51222496793 80.609 1 0.11009548320159333 0.0022306423027562182 0.9438714419765777 ['ENSG00000144867|ENST00000678299|SRPRB'] 14000 9187 DRTGTGTLSV True PC9_epitope_Rep1 1005.50908787189 1005.50798993586 40.188 2 0.11009270498098798 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 53847 8562 KYGPIRQI True PC9_epitope_Rep5 973.5709002828098 973.56980993586 37.875 2 0.11009190624241845 0.0022306423027562182 0.9438714419765777 ['ENST00000478050.1_1_2:24296944-24299099:-|nuORF', 'ENSG00000115128|ENST00000233468|SF3B6'] 2445 4097 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 20.849 2 0.11008937364364209 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 96564 11665 SELPTTVTV True H1975_Epitope_Rep1 945.50187723313 945.50132496793 49.859 1 0.11008319127591845 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 27656 21348 FQDDPDIIAF True PC9_epitope_Rep4 1179.5448046742697 1179.54370993586 90.283 2 0.11008198824048492 0.0022306423027562182 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'nc|ENSG00000132912|Q9UJW0-2|DCTN4'] 75628 9904 NQSDTSVSL True PC9_epitope_Rep4 949.43525422529 949.4347049679301 45.747 1 0.11007647961178951 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 116193 13041 TVTNAVVTV True PC9_epitope_Rep4 902.50729696674 902.50618993586 58.056 2 0.11007519790219415 0.0022306423027562182 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 8663 20971 AVATDFFTV True PC9_epitope_Rep4 969.48074786573 969.47964993586 88.827 2 0.1100699403740089 0.0022306423027562182 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 38525 6543 HHDSHSSVIL True PC9_epitope_Rep3 1130.5468703629401 1130.54521490379 30.194 3 0.11006667588112282 0.0022306423027562182 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 75577 18693 NQPGVLIQV True PC9_epitope_Rep4 966.5498304850599 966.54928496793 79.983 1 0.11006076757791461 0.0022306423027562182 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 33816 9706 GLTSVINQK True PC9_epitope_Rep1 958.5447451046199 958.54364993586 42.191 2 0.11005915781230258 0.0022306423027562182 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 45145 9534 IRAPSGTSL True PC9_epitope_Rep3 900.50288029264 900.50178993586 41.619 2 0.1100553411437726 0.0022306423027562182 0.9438714419765777 ['ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4'] 76747 20259 NTTDIFQTV True PC9_epitope_Rep3 1037.50293986229 1037.50184993586 83.186 2 0.11005213734422989 0.0022306423027562182 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 6221 4494 APRGDGVQVSA True PC9_epitope_Rep4 1055.5359713260698 1055.5348699358601 23.761 2 0.11005144924648488 0.0022306423027562182 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 2028 8799 AELDDTPMR True PC9_epitope_Rep3 1046.47025983502 1046.46916993586 38.797 2 0.11004521694573297 0.0022306423027562182 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 17787 8362 EHVPNSVRL True PC9_epitope_Rep5 1049.56179215109 1049.5606899358602 37.107 2 0.11004269993839776 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 8462 8108 ATSVITIVK True NCI_RA007_Epitope_Rep5 930.57498260374 930.57388993586 37.874 2 0.1100328102250128 0.0022306423027562182 0.9438714419765777 ['ENSG00000197063|ENST00000357736|MAFG'] 53689 20822 KYAMMFAEL True PC9_epitope_Rep1 1102.51912460374 1102.51802993586 84.921 2 0.11002256312447155 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 87828 20618 QVIQGLEAL True PC9_epitope_Rep3 969.5494961318898 969.54838993586 84.576 2 0.1100216692404116 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 27274 22129 FLYPFPLAL True H1975_Epitope_Rep1 1079.60555445603 1079.60497496793 92.076 1 0.11002108297576653 0.0022306423027562182 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 24376 7704 FAEHNDLQY True H1975_Epitope_Rep2 1135.4934378077498 1135.49287496793 34.588 1 0.11001374249220586 0.0022306423027562182 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 41019 18208 HYGLPVVV True PC9_epitope_Rep5 882.49633836022 882.49524993586 75.049 2 0.11001366092051729 0.0022306423027562182 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 38816 11220 HIDPNFASL True NCI_RA007_Epitope_Rep5 1012.4977949122 1012.49668993586 49.793 2 0.11000790599501782 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 108408 3296 TEEDPGRPGA True H1975_Epitope_Rep1 1027.4570522990298 1027.4559499358602 16.738 2 0.10999679030115556 0.0022306423027562182 0.9438714419765777 ['ENST00000524852.1_1_11:6340395-6340857:-|nuORF', 'ENST00000532354.1_1_11:6340395-6341123:-|nuORF', 'ENSG00000170955|ENST00000303927|CAVIN3'] 89234 6360 REIVMTQSP True NCI_RA007_Epitope_Rep4 1059.5382798251899 1059.5371899358602 31.068 2 0.10999610850007277 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000243063|A0A075B6H7|IGKV3-7'] 107530 10862 TADHNLLLY True H1975_Epitope_Rep1 1058.53965972418 1058.53907496793 46.74 1 0.10999293996971339 0.0022306423027562182 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 84839 14993 QHNDALTVTL True PC9_epitope_Rep5 1110.56693710118 1110.5658499358601 62.673 2 0.10998804474223292 0.0022306423027562182 0.9438714419765777 ['ENST00000426902.5_1_19:18273817-18280101:+|nuORF', 'ENSG00000105647|ENST00000222254|PIK3R2'] 40023 4604 HQVEQTEL True NCI_RA007_Epitope_Rep4 982.4719740871799 982.47086993586 24.122 2 0.1099874235877046 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 73255 7018 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 31.92 2 0.10998668487758263 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 83908 9638 QEISHLIEP True NCI_RA007_Epitope_Rep4 1064.55022440788 1064.54912993586 43.925 2 0.1099860062716299 0.0022306423027562182 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 21800 16471 ESDLPDELLY True H1975_Epitope_Rep1 1192.54994962436 1192.54937496793 68.724 1 0.10998271201150994 0.0022306423027562182 0.9438714419765777 ['ENST00000452107.6_1_7:55447520-55499010:+|nuORF', 'ENSG00000132434|ENST00000254770|LANCL2'] 102121 7982 SPQQPGLSA True PC9_epitope_Rep3 883.4399456829099 883.43884993586 35.68 2 0.10997924666444357 0.0022306423027562182 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 127010 8223 VPYEIQKGQA True PC9_epitope_Rep3 1131.59242357303 1131.5913299358601 36.608 2 0.10997625399086042 0.0022306423027562182 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 53538 17574 KVPEWVDTV True PC9_epitope_Rep5 1071.5600608155898 1071.5589699358602 72.607 2 0.10997577307468664 0.0022306423027562182 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 1483 12380 AEEMETVIP True H1975_Epitope_Rep2 1017.4688628526899 1017.46776993586 52.706 2 0.10997360071960445 0.0022306423027562182 0.9438714419765777 ['ENSG00000116288|ENST00000338639|PARK7', 'ENST00000497113.1_1_1:8022845-8031696:+|nuORF', 'ENST00000465354.5_1_1:8022845-8031070:+|nuORF', 'ENST00000460192.5_1_1:8022845-8029412:+|nuORF'] 39916 16710 HQLESILAM True PC9_epitope_Rep6 1040.5324661687598 1040.53136993586 76.75 2 0.10997141612812442 0.0022306423027562182 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 117849 14392 VAPEEHPVLL True PC9_epitope_Rep1 1102.60225998074 1102.60116993586 60.183 2 0.10996116867351809 0.0022306423027562182 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 6270 8425 APRPTIINA True PC9_epitope_Rep2 951.5501648382299 951.54906993586 37.776 2 0.10995345561395557 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 75650 21498 NQSELAVLL True PC9_epitope_Rep5 985.5444107514498 985.5438649679301 87.728 1 0.1099532784521089 0.0022306423027562182 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 103834 15095 SRIDIANTL True PC9_epitope_Rep1 1001.5505587610501 1001.54946993586 62.882 2 0.1099531213433553 0.0022306423027562182 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 135485 5383 YEDGARIEA True H1975_Epitope_Rep3 1022.4668887067398 1022.46578993586 25.773 2 0.10995237732811809 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000247077|Q96HS1-2|PGAM5', 'ENSG00000247077|ENST00000498926|PGAM5'] 88291 17698 QYILFPLRF True NCI_RA007_Epitope_Rep3 1195.67536535135 1195.6742699358601 77.6 2 0.1099470773901562 0.0022306423027562182 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 35310 5153 GSSSVILEK True NCI_RA007_Epitope_Rep4 918.5022115863 918.50110993586 26.344 2 0.10994466274351115 0.0022306423027562182 0.9438714419765777 ['ENSG00000177409|ENST00000318238|SAMD9L'] 105822 14917 SVIPQIQKV True PC9_epitope_Rep3 1010.6124307416198 1010.61132993586 62.513 2 0.10994446190830476 0.0022306423027562182 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 24277 14237 FAAGETFL True H1975_Epitope_Rep3 854.41741933318 854.4168749679301 60.104 1 0.10993797682560166 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 103145 20753 SQMPTVIYV True PC9_epitope_Rep5 1036.5263181591597 1036.5252299358601 84.878 2 0.10993760853323756 0.0022306423027562182 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 34374 12862 GPSVFLFPPK True H1975_Epitope_Rep2 1087.6066170851898 1087.6055299358602 54.585 2 0.10993378020994522 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 95185 16071 SAAFPGASL True PC9_epitope_Rep6 819.41266830591 819.41211496793 74.143 1 0.1099330792226093 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 34904 8228 GQVTEAVKV True PC9_epitope_Rep3 929.5181960036099 929.51708993586 36.628 2 0.1099284405474924 0.0022306423027562182 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 139242 5377 YTAPPLQSK True NCI_RA007_Epitope_Rep4 1003.53384606775 1003.53274993586 27.25 2 0.1099221687929662 0.0022306423027562182 0.9438714419765777 ['ENSG00000155008|ENST00000373173|APOOL'] 76954 21088 NVPEGLLATV True PC9_epitope_Rep3 1011.56006081559 1011.55896993586 86.398 2 0.10992023195471075 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 136622 7249 YIDEQFER True H1975_Epitope_Rep1 1098.4981888350198 1098.49708993586 32.893 2 0.10991801966785325 0.0022306423027562182 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENST00000484167.5_1_2:242276764-242276932:+|nuORF'] 75021 14581 NMDNMFESY True H1975_Epitope_Rep2 1149.41069635357 1149.4095899358601 61.242 2 0.1099144169634941 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 22266 5268 ETDRGMSAEY True H1975_Epitope_Rep3 1157.46590273057 1157.4653749679298 25.346 1 0.10991425228471591 0.0022306423027562182 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 132795 16609 VYSQIPAAVKL True PC9_epitope_Rep4 1187.6914093383098 1187.6903099358601 71.862 2 0.10991146988630093 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 23745 23791 EYIQFVPLL True PC9_epitope_Rep1 1120.6168474157198 1120.61627496793 96.31 1 0.10990970167446858 0.0022306423027562182 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 40201 6838 HRGTGIAL True PC9_epitope_Rep1 823.46643521427 823.46532993586 31.108 2 0.10989771076302952 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 113620 15207 TRDAGYGGLSL True PC9_epitope_Rep3 1108.5512870370399 1108.55018993586 63.639 2 0.10989508225007395 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 48957 6468 KEYLKALAA True H1975_Epitope_Rep3 1005.5858816406097 1005.58478993586 29.851 2 0.10987622751410435 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4', 'CHD8-TOX4|1|fusion', 'nc|ENSG00000124191|Q96NM4-3|TOX2', 'ENSG00000124191|ENST00000341197|TOX2', 'nc|ENSG00000124191|Q96NM4-2|TOX2', 'nc|ENSG00000103460|O15405-2|TOX3', 'ENSG00000103460|ENST00000219746|TOX3'] 38867 18559 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 76.174 2 0.10987541068463867 0.0022306423027562182 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 138036 5005 YQDPHSTAV True PC9_epitope_Rep3 1016.45632402304 1016.45522993586 24.343 2 0.10987066174842686 0.0022306423027562182 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 30269 6866 GAAKDLPGV True PC9_epitope_Rep6 826.4548674710599 826.45376993586 35.292 2 0.10983725551567226 0.0022306423027562182 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 48781 8519 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5911749679299 37.723 1 0.10983697922954234 0.0022306423027562182 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 97932 11912 SHQESLSVL True PC9_epitope_Rep5 998.5032742154599 998.50216993586 50.817 2 0.109834339472008 0.0022306423027562182 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI'] 140513 15529 YYITGNLETF True NCI_RA007_Epitope_Rep3 1219.57610480255 1219.5750099358602 68.644 2 0.10982806515880546 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 83150 7265 PYSDSTAKL True PC9_epitope_Rep5 980.48147614172 980.48036993586 32.909 2 0.1098257586232772 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF', 'ENST00000602040.5_1_19:50354666-50357992:+|nuORF', 'PTOV1|p.M142Hfs*58|2|0.28|ENSG00000104960|chr19:49854860-49854861|-/A|frameshift_variant'] 31000 16942 GATSLVTLL True H1975_Epitope_Rep2 873.51713337445 873.51658496793 70.412 1 0.10981895196689813 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF', 'ENSG00000227507|ENST00000429299|LTB'] 109511 12471 THAAQQILL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 52.968 2 0.10981894479900088 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 132865 17469 VYTSGIYNV True PC9_epitope_Rep5 1014.5022115863001 1014.50110993586 72.196 2 0.10981271851879197 0.0022306423027562182 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 87365 12678 QTDIQGALSAY True H1975_Epitope_Rep1 1165.5615173675699 1165.56097496793 53.821 1 0.10980923152701723 0.0022306423027562182 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 140555 21155 YYLNEIQSF True PC9_epitope_Rep2 1175.5498900547097 1175.54937496793 86.826 1 0.10979935981391187 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 39534 19135 HPFGFVAV True PC9_epitope_Rep3 872.4544735482399 872.45336993586 78.823 2 0.10979929385730182 0.0022306423027562182 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 136475 11968 YHHGYSYIL True PC9_epitope_Rep2 1151.53999407735 1151.5383449037902 51.355 3 0.10979924980066473 0.0022306423027562182 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 38492 4693 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 23.422 2 0.10978922842682513 0.0022306423027562182 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 77153 15692 NYENKQYLF True PC9_epitope_Rep1 1217.57168812845 1217.5705899358602 65.181 2 0.1097805519969203 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 76356 9388 NSEPETLEY True H1975_Epitope_Rep3 1080.46113461996 1080.46057496793 41.111 1 0.10977653399924953 0.0022306423027562182 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD'] 6137 19866 APNPVVFVA True PC9_epitope_Rep1 912.5069030439199 912.5063549679301 81.233 1 0.10977285012115723 0.0022306423027562182 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 139877 13267 YVDPVNKVL True PC9_epitope_Rep6 1045.58079626017 1045.5796899358602 62.683 2 0.10977254730119623 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 97628 6450 SHANSAVVL True PC9_epitope_Rep2 896.47158016436 896.47048993586 30.225 2 0.10976343896740165 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 109821 19452 THLEGVLLL True PC9_epitope_Rep4 993.5858816406098 993.58478993586 82.937 2 0.10976086730639238 0.0022306423027562182 0.9438714419765777 ['ENSG00000204839|ENST00000398882|MROH6', 'MROH6|p.H353Lfs*180|1|0.11|ENSG00000204839|chr8:143570026-143570051|GAGGCCTCGCAGGTGGTGGTCGGCAT/-|frameshift_variant'] 101913 12551 SPLLLQAKA True PC9_epitope_Rep5 939.5753169569099 939.57420993586 53.277 2 0.1097488902606531 0.0022306423027562182 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 105989 14208 SVLKSIQEV True PC9_epitope_Rep1 1001.57571087973 1001.5746099358599 59.474 2 0.10974310020941683 0.0022306423027562182 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 45960 3778 ISSPTETER True NCI_RA007_Epitope_Rep2 1018.49310345458 1018.49200993586 19.335 2 0.10974050981908404 0.0022306423027562182 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 6220 4413 APRGDGVQVSA True PC9_epitope_Rep4 1055.5359713260698 1055.5348699358601 23.422 2 0.10973254947774116 0.0022306423027562182 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 70302 18928 LYPEGLAQL True PC9_epitope_Rep6 1002.5385970950199 1002.53807496793 85.452 1 0.10972110643810913 0.0022306423027562182 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 34874 10235 GQVLLRAQL True NCI_RA007_Epitope_Rep4 996.6080140675199 996.60690993586 46.225 2 0.10971323288234339 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 56203 19687 LDPHLVLDQLR True PC9_epitope_Rep1 1317.7404847890498 1317.73882490379 80.55 3 0.10971110736905884 0.0022306423027562182 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 95242 7722 SADETWDSA True NCI_RA007_Epitope_Rep4 980.37231961556 980.37122993586 36.376 2 0.10971095826812939 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 84539 14603 QHADPPVQIL True PC9_epitope_Rep5 1116.5927579262 1116.5916699358602 61.172 2 0.1097083405114683 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 102333 5521 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 27.998 2 0.10970833937021834 0.0022306423027562182 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 103655 11645 SRDPHTEFTL True PC9_epitope_Rep1 1201.57275075761 1201.57111490379 49.671 3 0.10970559691135495 0.0022306423027562182 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'COL12A1|p.Y484C|1|0.34|ENSG00000111799|chr6:75183490-75183490|T/C|missense_variant'] 11689 18274 DHEGLGISI True PC9_epitope_Rep5 939.4661604307499 939.46506993586 75.304 2 0.10970499760817366 0.0022306423027562182 0.9438714419765777 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 52476 9670 KPLEPVSTV True PC9_epitope_Rep3 968.55424715916 968.55314993586 42.146 2 0.10970405145204062 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 109688 16528 THEPNFTII True PC9_epitope_Rep4 1070.53965972418 1070.53856993586 71.547 2 0.10969568502889153 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 73861 18745 NHFPGSFQI True PC9_epitope_Rep3 1045.49812926537 1045.4970299358602 77.325 2 0.10969349774281514 0.0022306423027562182 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 106658 23123 SYADQMFLL True PC9_epitope_Rep1 1086.50558271458 1086.5050749679299 93.737 1 0.10968882885177043 0.0022306423027562182 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 69039 18818 LVIDAVREI True PC9_epitope_Rep2 1026.6073453611798 1026.6062499358602 77.754 2 0.10968145332895926 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 97058 6374 SEYIHAQVA True NCI_RA007_Epitope_Rep4 1016.4927095317598 1016.49160993586 31.121 2 0.10967677220748703 0.0022306423027562182 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 51965 7449 KKWTSVIRL True NCI_RA007_Epitope_Rep3 1129.69716342509 1129.69552490379 36.423 3 0.10967025197144824 0.0022306423027562182 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 112928 20901 TPQSLFILFG True H1975_Epitope_Rep1 1121.6120963884498 1121.61157496793 86.839 1 0.10966647609866938 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 48819 5097 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 24.72 2 0.10966259370106156 0.0022306423027562182 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 86492 14154 QQYNSFVSL True NCI_RA007_Epitope_Rep5 1084.5189242796 1084.5178299358602 61.132 2 0.1096603569769328 0.0022306423027562182 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 115325 12898 TVDSYVISY True H1975_Epitope_Rep3 1045.49679185269 1045.4956899358601 54.837 2 0.10965884597012192 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 107564 8912 TAEDLFEAR True H1975_Epitope_Rep1 1050.4981888350198 1050.49708993586 39.183 2 0.10965850578650112 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 104310 16638 SSELFTLTY True H1975_Epitope_Rep3 1059.51244191683 1059.5113499358602 69.506 2 0.10965607734887407 0.0022306423027562182 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 54041 12573 KYLSVQGQLF True NCI_RA007_Epitope_Rep4 1181.64445914589 1181.6433699358602 55.381 2 0.1096500817191118 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1', 'ENST00000471737.1_1_6:36936681-36938521:-|nuORF'] 102874 13537 SQHGVIIQL True PC9_epitope_Rep6 993.5607295219299 993.55962993586 63.803 2 0.10964915949249432 0.0022306423027562182 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 89273 9902 RELENIIQET True NCI_RA007_Epitope_Rep4 1243.6408303174298 1243.63972993586 44.934 2 0.10964855731933681 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF'] 73974 6217 NHNSQVWRV True PC9_epitope_Rep2 1138.5631891334199 1138.56154490379 29.311 3 0.10964141715164105 0.0022306423027562182 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L', 'ENST00000590032.1_1_18:12982523-12982694:+|nuORF'] 84021 5571 QENTQTPTV True H1975_Epitope_Rep2 1016.47745339044 1016.47687496793 26.433 1 0.10963009514139488 0.0022306423027562182 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 139800 16187 YVDDGLISL True H1975_Epitope_Rep3 993.5018772331299 993.50132496793 67.718 1 0.10962840860431322 0.0022306423027562182 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 109406 21598 TGPTRFFLF True PC9_epitope_Rep1 1084.5705659296398 1084.56946993586 87.9 2 0.10962418082765629 0.0022306423027562182 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 124456 15358 VLETNLTGTFY True H1975_Epitope_Rep2 1256.6288686514 1256.6277699358602 64.234 2 0.1096187186457161 0.0022306423027562182 0.9438714419765777 ['FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion', 'ENST00000487318.6_1_2:216928831-216946521:-|nuORF', 'ENST00000474093.5_1_2:216929948-216946521:-|nuORF', 'ENST00000497889.5_1_2:216915539-216946464:-|nuORF', 'ENSG00000115425|ENST00000265322|PECR'] 9798 11934 AYLHTTTTF True PC9_epitope_Rep2 1053.51311062317 1053.51200993586 51.226 2 0.10961852654692474 0.0022306423027562182 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 123207 14356 VHLDSAVAL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 60.483 2 0.1096144583233008 0.0022306423027562182 0.9438714419765777 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 112831 5010 TPMGPGRTV True PC9_epitope_Rep4 914.46438660894 914.46328993586 25.892 2 0.10961371773326153 0.0022306423027562182 0.9438714419765777 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 132191 14267 VYKAFVDNY True PC9_epitope_Rep5 1117.54441075145 1117.5433099358602 59.881 2 0.10960925753633748 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 38933 20859 HIPDVITYL True PC9_epitope_Rep5 1069.58079626017 1069.5796899358602 85.286 2 0.10960514213902604 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 1877 8098 AEIIITKTP True H1975_Epitope_Rep3 984.58554728744 984.58444993586 36.123 2 0.10959862406235095 0.0022306423027562182 0.9438714419765777 ['ENSG00000174306|ENST00000683867|ZHX3', 'nc|ENSG00000174306|Q9H4I2-2|ZHX3'] 37286 19583 GVVPQLVKL True PC9_epitope_Rep1 951.6117024656298 951.61060993586 80.153 2 0.10959669254193183 0.0022306423027562182 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 57280 6629 LEGFHTQISK True NCI_RA007_Epitope_Rep2 1158.6033226099 1158.60166490379 30.396 3 0.10959336810328386 0.0022306423027562182 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1', 'ENST00000560420.1_1_14:24606925-24607473:+|nuORF'] 120400 19461 VFSPDGHLF True PC9_epitope_Rep3 1017.4919812557699 1017.49088993586 80.085 2 0.10959003313360227 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000101182|O14818-4|PSMA7', 'ENST00000484488.5_1_20:60714188-60718428:-|nuORF', 'ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000154611|Q8TAA3-2|PSMA8', 'ENSG00000154611|ENST00000415576|PSMA8', 'nc|ENSG00000154611|Q8TAA3|PSMA8'] 117850 13806 VAPEEHPVLL True PC9_epitope_Rep2 1102.60225998074 1102.60116993586 58.389 2 0.10958609278508856 0.0022306423027562182 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 11864 16735 DHNINLVSM True PC9_epitope_Rep1 1041.4913296327702 1041.49022993586 69.198 2 0.10957984773609863 0.0022306423027562182 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 24068 14934 EYQKVWNLF True NCI_RA007_Epitope_Rep3 1225.6131590176099 1225.61206993586 66.184 2 0.10957789692125545 0.0022306423027562182 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 31837 16303 GENPLQVLV True H1975_Epitope_Rep3 967.5338460677499 967.53274993586 68.184 2 0.10957680792449888 0.0022306423027562182 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 26288 16357 FIDDANYSV True PC9_epitope_Rep6 1042.4607406971402 1042.4596499358602 75.295 2 0.10957295922042842 0.0022306423027562182 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 72923 14246 NAYTGVVYL True H1975_Epitope_Rep2 998.5072969667399 998.5067449679301 59.946 1 0.10956443376019304 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 109979 14638 THSNTIVVSL True PC9_epitope_Rep1 1069.57677350889 1069.57566993586 61.128 2 0.10956329013140345 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 89128 12861 REFPTVPLV True NCI_RA007_Epitope_Rep5 1056.59678067748 1056.59568993586 56.154 2 0.10956084596559375 0.0022306423027562182 0.9438714419765777 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 96450 10921 SEILYSAPP True H1975_Epitope_Rep3 975.49131254943 975.4907649679301 47.095 1 0.1095571391847221 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 89152 6000 REHDIRVSL True NCI_RA007_Epitope_Rep4 1123.60980497267 1123.60816490379 29.698 3 0.10955632503673739 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 14065 11919 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 50.926 2 0.1095487838166886 0.0022306423027562182 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 31950 6017 GESDRVFAT True H1975_Epitope_Rep2 980.45632402304 980.45522993586 28.123 2 0.10954515002587337 0.0022306423027562182 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 43372 14548 IHNQDLLL True PC9_epitope_Rep4 964.5341804209199 964.53308993586 63.872 2 0.10954289842562129 0.0022306423027562182 0.9438714419765777 ['ENSG00000198455|ENST00000374888|ZXDB', 'ENSG00000198205|ENST00000358697|ZXDA', 'ZXDA|p.L327Cfs*25|1|0.52|ENSG00000198205|chrX:57909442-57909442|G/-|frameshift_variant'] 108714 3929 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep3 1063.39504666987 1063.39394993586 20.24 2 0.10953679369547341 0.0022306423027562182 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 94724 10834 RYLEQLHQL True PC9_epitope_Rep6 1198.64585612822 1198.64422490379 52.526 3 0.10953558434701555 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 118506 6546 VDSQILPK True H1975_Epitope_Rep3 898.5123823471799 898.51128993586 30.147 2 0.10953466988534499 0.0022306423027562182 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF'] 48045 20012 KALQFLEEV True PC9_epitope_Rep1 1075.5913609438699 1075.59026993586 81.802 2 0.10952329145861854 0.0022306423027562182 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 57315 10042 LEGNLPVSA True H1975_Epitope_Rep2 898.47599683846 898.47488993586 43.618 2 0.1095208501769784 0.0022306423027562182 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 35713 8132 GTSELLLAK True NCI_RA007_Epitope_Rep4 930.5385970950199 930.53750993586 38.071 2 0.1095148106900428 0.0022306423027562182 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 57450 9039 LEIPPPKPP True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 39.756 2 0.1094994365945036 0.0022306423027562182 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 27362 21712 FMPPGLQEL True PC9_epitope_Rep1 1030.5157534754599 1030.51464993586 88.347 2 0.10949596511318226 0.0022306423027562182 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 95999 9046 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39686496793 39.748 1 0.10949356671948986 0.0022306423027562182 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 52537 9529 KPQPSILQA True PC9_epitope_Rep1 980.5654805491998 980.56438993586 41.51 2 0.10948136865492515 0.0022306423027562182 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 126004 8832 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.49088993586 43.9 2 0.10948125968198104 0.0022306423027562182 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 30073 14894 FYMDTSHLF True NCI_RA007_Epitope_Rep3 1159.5008316873098 1159.4997299358602 66.014 2 0.10947622349977078 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 3245 5495 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 26.531 2 0.10947540462744396 0.0022306423027562182 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 44619 10905 IPHSLPGAVAA True PC9_epitope_Rep6 1031.5763795860698 1031.5752899358602 52.812 2 0.10947517847947767 0.0022306423027562182 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 8893 20584 AVGELLQEV True PC9_epitope_Rep3 956.51786165044 956.51676993586 84.442 2 0.10946728811373413 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000463685.1_1_3:183903968-183904464:+|nuORF', 'ENST00000485921.5_1_3:183903968-183904686:+|nuORF', 'ENST00000466416.1_1_3:183903995-183905333:+|nuORF', 'ENST00000498136.5_1_3:183903995-183905550:+|nuORF', 'ENST00000478288.5_1_3:183903968-183905333:+|nuORF'] 90425 12168 RIPTAGIYGA True PC9_epitope_Rep2 1017.5607295219298 1017.55962993586 52.116 2 0.10946489905303082 0.0022306423027562182 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 126930 14091 VPVEQAVSV True PC9_epitope_Rep5 926.5072969667398 926.50618993586 59.212 2 0.10946287114311404 0.0022306423027562182 0.9438714419765777 ['ENSG00000131899|ENST00000316843|LLGL1'] 120110 10907 VFIDKQTNL True PC9_epitope_Rep6 1076.5866099166 1076.58550993586 52.819 2 0.10946170340152497 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 132279 19654 VYLDKFIRL True PC9_epitope_Rep2 1165.68593003505 1165.68427490379 80.984 3 0.1094566257126012 0.0022306423027562182 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 52538 8073 KPQPSILQA True PC9_epitope_Rep4 980.5654805491998 980.56438993586 38.503 2 0.10945524086735643 0.0022306423027562182 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 103536 17804 SRDDNMFQI True PC9_epitope_Rep3 1124.49205790876 1124.4909699358602 73.681 2 0.10944482997802978 0.0022306423027562182 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 106536 20687 SVVSQFITV True PC9_epitope_Rep4 978.5385970950199 978.53750993586 87.733 2 0.10944093922928436 0.0022306423027562182 0.9438714419765777 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1'] 129299 10661 VTDSGPTFNY True H1975_Epitope_Rep1 1099.4822044177101 1099.4816749679298 45.964 1 0.10943518342829794 0.0022306423027562182 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 64155 13022 LQFDKAINA True PC9_epitope_Rep2 1018.5447451046199 1018.54364993586 55.37 2 0.10942530594161777 0.0022306423027562182 0.9438714419765777 ['ENSG00000140307|ENST00000396060|GTF2A2'] 13877 17360 DRDNVGLVL True PC9_epitope_Rep5 999.53490869691 999.53380993586 71.775 2 0.10942166519099095 0.0022306423027562182 0.9438714419765777 ['ENSG00000174606|ENST00000366962|ANGEL2', 'nc|ENSG00000174606|Q5VTE6-2|ANGEL2'] 108354 5899 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 27.676 2 0.10942053809768454 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 71028 13307 MESPFITSP True H1975_Epitope_Rep3 1007.46338354943 1007.46287496793 56.443 1 0.1094121726420962 0.0022306423027562182 0.9438714419765777 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 34602 10356 GQHPNIITL True NCI_RA007_Epitope_Rep2 991.5450794577899 991.5439899358599 44.874 2 0.10940928456816833 0.0022306423027562182 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'RPS6KA6|p.R473P|1|0.56|ENSG00000072133|chrX:84105824-84105824|C/G|missense_variant', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 129446 10599 VTELHVISY True H1975_Epitope_Rep2 1059.5600608155898 1059.5589699358602 45.791 2 0.10940827165381536 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78360201-78362555:+|nuORF'] 75923 6811 NRDVPNETL True PC9_epitope_Rep4 1056.51998690876 1056.5188899358602 33.413 2 0.10940394652640272 0.0022306423027562182 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 34826 17462 GQVEDVVGNL True PC9_epitope_Rep6 1028.5138388991597 1028.51274993586 79.79 2 0.10939968152333258 0.0022306423027562182 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 105512 18972 SVDEVEISV True PC9_epitope_Rep5 975.4760564081099 975.4755049679301 78.0 1 0.1093990475676717 0.0022306423027562182 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000556963.5_1_14:77924568-77929110:+|nuORF'] 96140 11358 SEDYPAALP True H1975_Epitope_Rep3 961.4392769765699 961.43872496793 48.799 1 0.10939729470409582 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 13033 16753 DLQSNLLQV True PC9_epitope_Rep6 1028.5502244078798 1028.54912993586 76.931 2 0.10939623301724771 0.0022306423027562182 0.9438714419765777 ['ENSG00000131067|ENST00000336431|GGT7'] 1777 10291 AEHPIVIVC True H1975_Epitope_Rep2 979.5160878286299 979.51498993586 44.59 2 0.10937820432082226 0.0022306423027562182 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37', 'DHX37|p.E276K|1|0.23|ENSG00000150990|chr12:124977403-124977403|C/T|missense_variant'] 41605 21796 IDFPGGILSF True PC9_epitope_Rep6 1064.55424715916 1064.5531499358601 96.731 2 0.10937773929923497 0.0022306423027562182 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 17220 15531 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 64.752 2 0.10937508732530461 0.0022306423027562182 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 32782 10804 GIDIFTGK True NCI_RA007_Epitope_Rep2 849.45961849833 849.45852993586 46.628 2 0.10937284718896582 0.0022306423027562182 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 106654 18542 SYADQMFLL True NCI_RA007_Epitope_Rep4 1086.50558271458 1086.5044899358602 80.233 2 0.10937254503963888 0.0022306423027562182 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 35423 11565 GTDMEPSLY True H1975_Epitope_Rep2 1011.42191266027 1011.4213749679301 49.549 1 0.10936652941868213 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 31451 9347 GEDYDERVLP True H1975_Epitope_Rep2 1191.54078192299 1191.53968993586 40.914 2 0.10936569644178912 0.0022306423027562182 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 38794 9492 HHYSGNNIEL True PC9_epitope_Rep3 1182.5417849825 1182.54013490379 41.461 3 0.10936491267985314 0.0022306423027562182 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 97899 10815 SHLVATVTV True PC9_epitope_Rep4 925.52328138405 925.52218993586 49.36 2 0.10935760423809808 0.0022306423027562182 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 55469 8797 LAVDKSASL True PC9_epitope_Rep2 902.50729696674 902.50618993586 39.191 2 0.10935232184559485 0.0022306423027562182 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 89652 8776 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 38.721 2 0.10934193251278522 0.0022306423027562182 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 45236 9987 IRPDNMSEY True PC9_epitope_Rep1 1123.49680893603 1123.49570993586 43.279 2 0.10932732311888632 0.0022306423027562182 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 138965 11412 YSESSQLLY True H1975_Epitope_Rep1 1088.50260550912 1088.50207496793 48.876 1 0.10932296238426954 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 29257 21284 FVDFNDPNF True PC9_epitope_Rep5 1113.47672511445 1113.47562993586 86.922 2 0.10932211921989002 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 108551 7340 TEGGTVLTA True H1975_Epitope_Rep3 847.4287122928699 847.42816496793 33.21 1 0.10931852379754729 0.0022306423027562182 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3'] 64079 5951 LQEAEKELK True NCI_RA007_Epitope_Rep2 1086.5920892198599 1086.59098993586 27.758 2 0.10930838841278415 0.0022306423027562182 0.9438714419765777 ['ENSG00000135862|ENST00000258341|LAMC1', 'ENST00000495918.1_1_1:183103830-183107010:+|nuORF'] 28682 8255 FSSVGSVITK True NCI_RA007_Epitope_Rep1 1023.56006081559 1023.5589699358601 36.11 2 0.10930662440132567 0.0022306423027562182 0.9438714419765777 ['ENST00000522364.5_1_8:80963727-80992703:-|nuORF', 'nc|ENSG00000076554|P55327|TPD52', 'nc|ENSG00000076554|P55327-7|TPD52', 'nc|ENSG00000076554|P55327-5|TPD52', 'nc|ENSG00000076554|P55327-6|TPD52', 'ENST00000517445.5_1_8:80962678-80964851:-|nuORF', 'ENST00000521354.5_1_8:80950353-81083761:-|nuORF', 'nc|ENSG00000076554|P55327-2|TPD52', 'ENSG00000076554|ENST00000518937|TPD52', 'nc|ENSG00000076554|P55327-3|TPD52'] 116356 20046 TVYEGFISA True PC9_epitope_Rep3 985.4756624852898 985.47511496793 82.356 1 0.10930032087937809 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 76804 10650 NVELDPEIQ True NCI_RA007_Epitope_Rep3 1055.51350454599 1055.51297496793 48.939 1 0.10929511793611377 0.0022306423027562182 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 4292 5591 AIITPPPAK True NCI_RA007_Epitope_Rep5 906.5538532363399 906.55274993586 28.195 2 0.10928913175942159 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 8002 6608 ATDPTIHTV True PC9_epitope_Rep2 953.4818104948899 953.48070993586 30.829 2 0.10928834017471303 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 72401 14450 M[Oxidation]TELPAPLSY True H1975_Epitope_Rep2 1136.5423625265598 1136.54126993586 60.737 2 0.10928746030223789 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1'] 26075 12725 FHEGDAYVV True PC9_epitope_Rep1 1035.4661604307498 1035.4650699358601 53.821 2 0.10928627116708022 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 72080 13900 M[Oxidation]RDPIRILV True PC9_epitope_Rep2 1127.64849936095 1127.6474099358602 58.747 2 0.10928352810024237 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 114350 13064 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45507496793 55.338 1 0.10927866929327598 0.0022306423027562182 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 2240 11930 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 50.967 2 0.10927397523145238 0.0022306423027562182 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 84908 9160 QHSTAQLNL True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 40.174 2 0.1092732422521138 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 93810 6952 RVAPAHGLFLK True NCI_RA007_Epitope_Rep4 1207.71896149883 1207.7173049037901 33.368 3 0.10926621514294865 0.0022306423027562182 0.9438714419765777 ['ENST00000493657.1_1_1:1246183-1246756:+|nuORF', 'nc|ENSG00000169972|Q8N0Z8-2|PUSL1', 'ENSG00000169972|ENST00000379031|PUSL1'] 132920 22196 VYTVVDEMF True PC9_epitope_Rep1 1101.5052483614097 1101.5041499358601 90.197 2 0.10925738272766952 0.0022306423027562182 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 103014 19150 SQITSLVTL True PC9_epitope_Rep6 960.54916177872 960.54806993586 86.312 2 0.10925316660010799 0.0022306423027562182 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 91825 13800 RPNDIMAEV True PC9_epitope_Rep1 1043.50697969691 1043.50588993586 57.927 2 0.10924585632440358 0.0022306423027562182 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 9815 10883 AYLHTTTTF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 52.724 2 0.1092436966157862 0.0022306423027562182 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 68723 16806 LVDEWLDSY True H1975_Epitope_Rep2 1138.51825557326 1138.51767496793 69.893 1 0.1092427300191149 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 136583 19485 YHVDSLLQL True PC9_epitope_Rep4 1086.57095985246 1086.5698699358602 83.065 2 0.10924006737571544 0.0022306423027562182 0.9438714419765777 ['ENSG00000141002|ENST00000263346|TCF25'] 38622 17030 HHIYLEGTLL True PC9_epitope_Rep2 1194.6397081186199 1194.63805490379 70.756 3 0.10923555409608965 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 48006 14573 KAINVFVSA True PC9_epitope_Rep3 947.54401682863 947.54290993586 61.182 2 0.10922904723043936 0.0022306423027562182 0.9438714419765777 ['ENSG00000114209|ENST00000392750|PDCD10'] 69173 10357 LVLVGDGGTGK True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 44.72 2 0.10922410141088493 0.0022306423027562182 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 4256 23452 AIIEYMPLL True PC9_epitope_Rep5 1061.5831047592899 1061.58257496793 95.193 1 0.10922082115705745 0.0022306423027562182 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 5070 19322 ALLPELREV True PC9_epitope_Rep2 1038.6073453611798 1038.6062499358602 79.696 2 0.10921922086559624 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000170175|P11230-2|CHRNB1', 'ENSG00000170175|ENST00000306071|CHRNB1'] 119257 14966 VELDNMPLR True PC9_epitope_Rep5 1085.5539298893298 1085.55282993586 62.569 2 0.10921022844793643 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 57102 8614 LEEMEAPAA True H1975_Epitope_Rep3 959.4269980407098 959.42644496793 38.126 1 0.10920649017711502 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 104966 19889 STIAILNSV True PC9_epitope_Rep4 916.5229470308801 916.52239496793 84.635 1 0.10920499808681325 0.0022306423027562182 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 102529 15125 SQADVIPAV True PC9_epitope_Rep6 898.4759968384599 898.47488993586 70.241 2 0.10919245611173611 0.0022306423027562182 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 116517 16858 TYDYNFHSF True PC9_epitope_Rep4 1192.48253877088 1192.4814499358602 72.825 2 0.10919081471183843 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 104198 15987 SSDGAISLLTY True H1975_Epitope_Rep2 1125.55536935797 1125.55477496793 66.692 1 0.10917408187533084 0.0022306423027562182 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 24121 5358 EYSKQMQRF True PC9_epitope_Rep2 1215.57064258263 1215.56899490379 25.995 3 0.10916234371522557 0.0022306423027562182 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 75844 10850 NRDLATPVM True PC9_epitope_Rep2 1015.51206507735 1015.51096993586 47.051 2 0.10916133994097625 0.0022306423027562182 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 76957 20216 NVPEGLLATV True PC9_epitope_Rep4 1011.56006081559 1011.55896993586 85.9 2 0.10915907988015541 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 34814 7833 GQVALRTSL True NCI_RA007_Epitope_Rep5 943.54507945779 943.5439899358599 36.828 2 0.10915525109242095 0.0022306423027562182 0.9438714419765777 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 131120 14941 VVPAALKVV True PC9_epitope_Rep3 894.59023874506 894.58914993586 62.603 2 0.10913321224516265 0.0022306423027562182 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 90069 10704 RGMAFLHTL True NCI_RA007_Epitope_Rep4 1044.55387031968 1044.5527699358602 48.019 2 0.10913040652483512 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 62167 13729 LLPHVVPGTT True PC9_epitope_Rep2 1032.59678067748 1032.59568993586 58.097 2 0.10913020982643698 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 72543 21423 MVGEGFIEV True PC9_epitope_Rep1 979.4684689298699 979.46792496793 87.242 1 0.10912796918725519 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 96887 6776 SETEATPVP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 30.979 1 0.10912652313192911 0.0022306423027562182 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 46746 19180 IVAPGTFEV True PC9_epitope_Rep4 931.5014833103099 931.50038993586 81.873 2 0.10912575654511127 0.0022306423027562182 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 1138 7119 AEAPPSVAP True H1975_Epitope_Rep2 837.4232329896099 837.42212993586 32.315 2 0.10910372679505717 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 35187 6757 GSDKINYTY True H1975_Epitope_Rep3 1059.48728979815 1059.48618993586 30.943 2 0.10908013888739641 0.0022306423027562182 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 4276 22166 AIISELVSI True PC9_epitope_Rep2 943.5589981864299 943.55790993586 90.75 2 0.10907915063005165 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 89270 7063 RELEDDARVIA True H1975_Epitope_Rep3 1285.6626283911698 1285.66152993586 32.134 2 0.10907543842371076 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 102151 14171 SPRPPLISV True PC9_epitope_Rep2 964.57056592964 964.56946993586 59.777 2 0.10907172982578556 0.0022306423027562182 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 86687 15530 QRIDEFEAM True PC9_epitope_Rep1 1137.5124590001699 1137.51136993586 64.56 2 0.10906621223635705 0.0022306423027562182 0.9438714419765777 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 72379 9601 MTEEEQIAY True H1975_Epitope_Rep2 1112.4695911286797 1112.4690749679298 41.906 1 0.10906556152364706 0.0022306423027562182 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 41010 18427 HYGLPVVV True PC9_epitope_Rep1 882.49633836022 882.49524993586 75.67 2 0.10906003867562772 0.0022306423027562182 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 27331 15746 FMDSESFYY True H1975_Epitope_Rep2 1187.44812740811 1187.4470299358602 65.738 2 0.10905687514561616 0.0022306423027562182 0.9438714419765777 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-2|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-3|INPP5F'] 132610 20715 VYPQYVIEY True PC9_epitope_Rep3 1172.57537652656 1172.5748749679299 84.954 1 0.10905645141563254 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000105939|Q7Z2W4-4|ZC3HAV1', 'ENSG00000105939|ENST00000242351|ZC3HAV1'] 97721 15100 SHFEGLITT True PC9_epitope_Rep3 1003.49746055903 1003.49636993586 63.219 2 0.10904751334984074 0.0022306423027562182 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 21005 5148 ERAPGETAL True PC9_epitope_Rep6 942.4770594676199 942.47596993586 27.524 2 0.10904571808042089 0.0022306423027562182 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 104954 3717 STHGTFLNK True NCI_RA007_Epitope_Rep4 1003.50869394907 1003.50758993586 20.431 2 0.10903540645907688 0.0022306423027562182 0.9438714419765777 ['ENSG00000163798|ENST00000326019|SLC4A1AP', 'nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP'] 6357 5383 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 28.581 2 0.10903512378934843 0.0022306423027562182 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 27828 18317 FQIPPNAEL True PC9_epitope_Rep6 1027.53384606775 1027.53274993586 83.098 2 0.10903263521968551 0.0022306423027562182 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4', 'ENST00000597277.1_9:43426178-43426727:-|nuORF'] 39410 15767 HLYGGIILL True H1975_Epitope_Rep2 997.5960524014899 997.59494993586 65.826 2 0.10902714359448834 0.0022306423027562182 0.9438714419765777 ['ENSG00000139826|ENST00000375898|ABHD13'] 65161 12650 LSDTEVLEY True H1975_Epitope_Rep1 1067.50227115595 1067.5016749679298 53.711 1 0.10902387125473946 0.0022306423027562182 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 106471 6153 SVVGNFQEK True NCI_RA007_Epitope_Rep4 1006.5083595959 1006.50726993586 30.279 2 0.10902138739580677 0.0022306423027562182 0.9438714419765777 ['ENSG00000180061|ENST00000326652|TMEM150B'] 28000 19428 FQVRDIENL True PC9_epitope_Rep3 1132.58767254576 1132.58656993586 79.955 2 0.10902065501548558 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000168003|P08195-5|SLC3A2', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2', 'ENST00000535768.1_1_11:62651934-62652955:+|nuORF', 'ENST00000538682.5_1_11:62651934-62653989:+|nuORF'] 74824 21211 NLPIFLPRV True PC9_epitope_Rep3 1067.64915060351 1067.6480499358602 86.878 2 0.10901260302243172 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 11688 18384 DHEGLGISI True PC9_epitope_Rep1 939.4661604307499 939.46506993586 75.504 2 0.10900242492371061 0.0022306423027562182 0.9438714419765777 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 75039 12162 NM[Oxidation]DNMFESY True H1975_Epitope_Rep3 1165.40561135357 1165.40450993586 51.951 2 0.1089991675186304 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 64072 18662 LQDVPLSSV True PC9_epitope_Rep1 956.51786165044 956.51676993586 76.571 2 0.1089934221836328 0.0022306423027562182 0.9438714419765777 ['ENST00000524576.5_1_11:66203480-66233392:-|nuORF', 'nc|ENSG00000174547|Q9Y3B7-2|MRPL11', 'nc|ENSG00000174547|Q9Y3B7-3|MRPL11', 'ENSG00000174547|ENST00000310999|MRPL11'] 137058 16308 YLADIFTKL True H1975_Epitope_Rep3 1082.6011973515801 1082.60010993586 68.203 2 0.10898157052458932 0.0022306423027562182 0.9438714419765777 ['ENSG00000236287|ENST00000413761|ZBED5'] 17299 9416 EHDPHVLLA True PC9_epitope_Rep1 1029.5243440132099 1029.5232499358601 41.076 2 0.1089780888188125 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 86659 14836 QRGPPIIL True PC9_epitope_Rep5 892.5494365622399 892.54832993586 62.068 2 0.10897491270918894 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 102317 5324 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 25.867 2 0.10897305111565767 0.0022306423027562182 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 118150 12222 VAVGVIKAV True PC9_epitope_Rep2 854.5589386167799 854.55784993586 52.325 2 0.10896257125634985 0.0022306423027562182 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 17325 9056 EHDPRVITV True PC9_epitope_Rep3 1064.56145779792 1064.56036993586 39.776 2 0.10896169995075089 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000102796|A0PJE2-2|DHRS12', 'ENSG00000102796|ENST00000444610|DHRS12', 'nc|ENSG00000102796|A0PJE2-3|DHRS12', 'nc|ENSG00000102796|A0PJE2|DHRS12'] 99963 22735 SLINVGLISV True PC9_epitope_Rep2 1013.6120963884499 1013.6115749679301 92.946 1 0.10895989446259413 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 119639 4741 VESEPAM[Oxidation]TP True H1975_Epitope_Rep3 975.4219130407099 975.42080993586 23.361 2 0.10895775517406961 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000498066.1_1_2:102484451-102486985:+|nuORF'] 4647 15038 ALATLIHQV True PC9_epitope_Rep4 964.5705659296401 964.56946993586 65.775 2 0.10895666363772086 0.0022306423027562182 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 108000 10698 [Acetylation]-TDAAVSFAK True NCI_RA007_Epitope_Rep1 950.47091177432 950.46980993586 45.603 2 0.10895180383364644 0.0022306423027562182 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant'] 73756 8394 NHAPSVQI True PC9_epitope_Rep3 864.44536541652 864.44426993586 37.253 2 0.10894963221661394 0.0022306423027562182 0.9438714419765777 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 35089 18618 GRLPSSWAL True PC9_epitope_Rep3 985.53451477409 985.53340993586 76.836 2 0.1089456989529813 0.0022306423027562182 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1'] 41026 9240 HYGQSGISM True PC9_epitope_Rep3 978.4229157197799 978.42180993586 40.485 2 0.10894025070011787 0.0022306423027562182 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 59112 10150 LGEHNIDVLEG True NCI_RA007_Epitope_Rep4 1194.5880664685799 1194.58696993586 45.9 2 0.1089401708852634 0.0022306423027562182 0.9438714419765777 ['CON__P00761'] 25886 10667 FGIDRPAEL True H1975_Epitope_Rep1 1016.5290950404799 1016.52798993586 45.989 2 0.10893984859860392 0.0022306423027562182 0.9438714419765777 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'ENST00000592188.1_1_19:19387459-19391209:-|nuORF', 'ENST00000589144.5_1_19:19387459-19413207:-|nuORF'] 47307 21000 IYGEGFQTW True PC9_epitope_Rep3 1099.4974605590298 1099.49636993586 86.052 2 0.10893963054796128 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 35671 4038 GTM[Oxidation]TGM[Oxidation]LYK True NCI_RA007_Epitope_Rep4 1032.4620044113199 1032.4609099358602 21.79 2 0.10893950874226355 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 1163 8058 AEATGAYVP True H1975_Epitope_Rep2 877.41814760917 877.4175949679301 35.943 1 0.1089366830695917 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'nc|ENSG00000126456|Q14653-2|IRF3'] 14068 12280 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 52.318 2 0.10892629741543133 0.0022306423027562182 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 109619 15897 THDGSILIV True PC9_epitope_Rep3 953.51819600361 953.51708993586 66.295 2 0.10891434923710726 0.0022306423027562182 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 32574 14997 GHADVAQLL True PC9_epitope_Rep1 922.4872302285 922.48612993586 62.505 2 0.10890408414489551 0.0022306423027562182 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'nc|ENSG00000196730|P53355-2|DAPK1', 'ENST00000495281.1_1_9:90263689-90265069:+|nuORF'] 40042 6426 HQVPAVSSV True PC9_epitope_Rep4 922.4872302285 922.48612993586 31.813 2 0.10890215947691173 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 25439 15326 FELPQTPLA True H1975_Epitope_Rep1 1014.5385970950199 1014.53807496793 64.22 1 0.10889936088689331 0.0022306423027562182 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 26066 8703 FHDPDSAVV True PC9_epitope_Rep6 985.4505103666099 985.44940993586 43.329 2 0.10889093324073175 0.0022306423027562182 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 74721 24444 NLLDLLTEV True PC9_epitope_Rep2 1028.57537652656 1028.5748749679299 99.598 1 0.1088890069295021 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 53424 12185 KVGPVLSV True PC9_epitope_Rep5 797.50108938749 797.49998993586 51.859 2 0.10888814708940919 0.0022306423027562182 0.9438714419765777 ['ENSG00000183696|ENST00000395564|UPP1'] 96220 10049 SEEPDALSV True H1975_Epitope_Rep3 945.4291062156899 945.42855496793 43.689 1 0.10888791779859965 0.0022306423027562182 0.9438714419765777 ['ENSG00000104442|ENST00000276569|ARMC1', 'ENST00000523384.1_1_8:66525632-66539633:-|nuORF'] 74214 12178 NIDPITM[Oxidation]AY True H1975_Epitope_Rep1 1052.48484765044 1052.48374993586 51.861 2 0.10888752670432447 0.0022306423027562182 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 91838 11638 RPNDIMAEV True PC9_epitope_Rep6 1043.50697969691 1043.50588993586 55.886 2 0.10888429205227024 0.0022306423027562182 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 19307 11851 ELLTTMGDR True PC9_epitope_Rep1 1034.5066453437398 1034.50554993586 50.45 2 0.1088785805179107 0.0022306423027562182 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL12A|p.R123G|1|0.11|ENSG00000101608|chr18:3255769-3255769|A/G|missense_variant', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 71054 6980 MESRSFYTA True H1975_Epitope_Rep3 1090.4753452154598 1090.4742499358601 31.81 2 0.10887731488853272 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000116260|O00391-2|QSOX1', 'ENSG00000116260|ENST00000367602|QSOX1'] 135905 10427 YETDNNIVV True H1975_Epitope_Rep2 1065.49785448185 1065.49727496793 45.121 1 0.1088760203049568 0.0022306423027562182 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 89799 9725 RFEEKHAYF True PC9_epitope_Rep3 1225.5880068989297 1225.58635490379 42.359 3 0.10887360699572529 0.0022306423027562182 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 25065 12107 FDEESYSLLR True NCI_RA007_Epitope_Rep2 1257.5877321154098 1257.5866299358602 51.687 2 0.10884922055000405 0.0022306423027562182 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 75863 14859 NRDNVGLVL True PC9_epitope_Rep1 998.5508931142199 998.54978993586 61.975 2 0.10883885530220423 0.0022306423027562182 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 140343 4581 YYEHVKARF True NCI_RA007_Epitope_Rep3 1211.60874234351 1211.60710490379 24.907 3 0.10883051827321326 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 91668 12449 RPGEITGYMA True PC9_epitope_Rep1 1093.52262976105 1093.5215299358601 52.75 2 0.10882939540156368 0.0022306423027562182 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 14884 19543 DYIKFLRSI True PC9_epitope_Rep4 1153.64954452633 1153.64788490379 83.294 3 0.10882453610607483 0.0022306423027562182 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF'] 105794 22002 SVIIPGMTL True PC9_epitope_Rep3 929.52558988317 929.52448993586 89.929 2 0.10881805459331095 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 26272 18629 FIDDANYSV True PC9_epitope_Rep1 1042.4607406971402 1042.4596499358602 76.444 2 0.10881380392987683 0.0022306423027562182 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 112853 6537 TPNEIKVSA True PC9_epitope_Rep4 957.51311062317 957.51200993586 32.272 2 0.1088091181212994 0.0022306423027562182 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 36468 23349 GVISGLFEL True PC9_epitope_Rep5 933.5171333744499 933.51658496793 94.794 1 0.10880736847317253 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 59158 10624 LGEYGFQNA True H1975_Epitope_Rep1 997.4505103666099 997.4499649679301 45.822 1 0.10880267085575863 0.0022306423027562182 0.9438714419765777 ['CON__P02769'] 17162 14850 EHAEALLL True PC9_epitope_Rep2 894.4810822188999 894.47998993586 62.385 2 0.10879832359909768 0.0022306423027562182 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 5136 15620 ALNDKFASL True PC9_epitope_Rep1 977.51819600361 977.51708993586 64.901 2 0.10879512655406963 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'CON__Q0VBK2'] 108902 6916 TESQALVSA True H1975_Epitope_Rep2 904.4501760134399 904.44962496793 31.523 1 0.10879483676970289 0.0022306423027562182 0.9438714419765777 ['ENST00000487995.1_1_1:212957698-212965105:-|nuORF', 'nc|ENSG00000117697|Q96IY1-2|NSL1', 'ENSG00000117697|ENST00000366977|NSL1'] 93816 7166 RVCEVDNEL True NCI_RA007_Epitope_Rep3 1075.49680893603 1075.49570993586 35.303 2 0.10878172956062383 0.0022306423027562182 0.9438714419765777 ['ENSG00000101347|ENST00000646673|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1'] 40170 12427 HRFGGLVL True PC9_epitope_Rep6 897.5184707871299 897.51736993586 59.229 2 0.10877708830470341 0.0022306423027562182 0.9438714419765777 ['ENSG00000007520|ENST00000007390|TSR3'] 8183 8642 ATGENLPRV True PC9_epitope_Rep2 955.5086939490699 955.50758993586 38.606 2 0.10877561790510712 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 112329 18955 TMLGKFYHF True PC9_epitope_Rep5 1142.55828699378 1142.5566449037901 77.934 3 0.10877236893397053 0.0022306423027562182 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 9669 21875 AYGNVFSAF True PC9_epitope_Rep5 974.4497820906199 974.44868993586 89.18 2 0.10876930072001625 0.0022306423027562182 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 8554 7651 ATYYGAFIKK True NCI_RA007_Epitope_Rep5 1160.6229954253197 1160.6213549037902 36.133 3 0.10876445935847057 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 32669 11758 GHNAIINTL True PC9_epitope_Rep2 951.5137793295102 951.51268993586 50.561 2 0.10876275613168984 0.0022306423027562182 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 41020 18300 HYGLPVVV True PC9_epitope_Rep5 882.49633836022 882.49524993586 75.405 2 0.1087505999940918 0.0022306423027562182 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 8917 12865 AVGKIFSNV True PC9_epitope_Rep2 933.52836676449 933.52726993586 54.786 2 0.10874791228366641 0.0022306423027562182 0.9438714419765777 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 112677 22280 TPFTGPFISV True PC9_epitope_Rep5 1064.55424715916 1064.5531499358601 90.706 2 0.10874503444804712 0.0022306423027562182 0.9438714419765777 ['ENSG00000164142|ENST00000435205|FHIP1A'] 60072 14037 LHSLGSVSL True PC9_epitope_Rep2 911.50763131991 911.50652993586 59.272 2 0.10874211981498269 0.0022306423027562182 0.9438714419765777 ['TNS4-CCR7|1|fusion', 'ENSG00000131746|ENST00000254051|TNS4'] 118 19909 AAAWPLLL True H1975_Epitope_Rep1 853.5061747679299 853.5056249679301 82.859 1 0.1087364047842016 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 114460 9533 TSERGSFSLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 41.641 2 0.1087326824094896 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'TCF12|p.S223Tfs*22|1|0.16|ENSG00000140262|chr15:57231240-57231240|G/-|frameshift_variant'] 106449 18892 SVVDGTPLV True PC9_epitope_Rep1 885.48074786573 885.4801949679301 77.453 1 0.10872872848732723 0.0022306423027562182 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 107188 21753 SYNVTSVLF True PC9_epitope_Rep2 1028.51786165044 1028.51676993586 89.144 2 0.10872713301125254 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant'] 103544 17597 SRDDNMFQI True PC9_epitope_Rep5 1124.49205790876 1124.49147496793 72.695 1 0.10872464134138782 0.0022306423027562182 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 91839 11719 RPNDIMAEV True PC9_epitope_Rep6 1043.50697969691 1043.50588993586 56.223 2 0.10872166163354514 0.0022306423027562182 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 6749 21328 AQEDYLFSV True PC9_epitope_Rep2 1070.49204082542 1070.49094993586 87.502 2 0.10871268714527656 0.0022306423027562182 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 88200 23324 QYAPLLAVF True PC9_epitope_Rep5 1020.5644179200399 1020.56332993586 94.696 2 0.10871232116445849 0.0022306423027562182 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 125964 10362 VPAGGAVAV True PC9_epitope_Rep3 739.42283906679 739.42229496793 44.801 1 0.10871168357764942 0.0022306423027562182 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 48805 3433 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 17.992 2 0.10871126911992214 0.0022306423027562182 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 83228 14336 QAALEFHGV True PC9_epitope_Rep5 970.4872302284999 970.48612993586 60.145 2 0.10871125474997263 0.0022306423027562182 0.9438714419765777 ['ENSG00000187231|ENST00000428443|SESTD1'] 63936 16337 LPWQGLKAA True PC9_epitope_Rep5 982.5600012459398 982.55890993586 67.837 2 0.10870152373429726 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000442216.1_2_22:38693892-38696026:-|nuORF', 'ENST00000431611.5_2_22:38689311-38696738:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E', 'nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1'] 97091 5706 SEYWDRETRSA True H1975_Epitope_Rep2 1398.61640647474 1398.61530993586 26.944 2 0.10869265415012702 0.0022306423027562182 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 86367 10425 QQLGKVVQV True PC9_epitope_Rep3 997.5920296502098 997.59092993586 45.039 2 0.10869037015518593 0.0022306423027562182 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 41440 20731 IAVNAVLTV True PC9_epitope_Rep1 898.5487678559 898.54766993586 84.569 2 0.1086870094790522 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 57179 13748 LEESFVPVAA True H1975_Epitope_Rep2 1060.54407639828 1060.5429699358601 58.027 2 0.10868654488966788 0.0022306423027562182 0.9438714419765777 ['ENSG00000182768|ENST00000379095|NGRN', 'ENST00000561573.1_1_15:90806992-90815017:+|nuORF'] 119795 4861 VEVEGTVKA True H1975_Epitope_Rep1 930.5022115862998 930.50110993586 23.777 2 0.10868439268982821 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 68820 7673 LVDSNNPKI True PC9_epitope_Rep5 998.53965972418 998.53856993586 34.458 2 0.10868219035246685 0.0022306423027562182 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 116649 21762 TYIPGTQITF True PC9_epitope_Rep3 1139.58627556343 1139.5851699358602 89.006 2 0.10867929282734622 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 11351 6945 DFDTYDDR True H1975_Epitope_Rep3 1045.39886871657 1045.3977699358602 31.675 2 0.1086727417673005 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H', 'ENST00000479338.5_1_7:73588713-73604094:+|nuORF', 'EIF4H|p.T100Ifs*23|1|0.1|ENSG00000106682|chr7:74189723-74189724|AC/-|frameshift_variant', 'ENST00000489484.5_1_7:73588713-73604262:+|nuORF'] 67485 14609 LTEIMSMGY True H1975_Epitope_Rep2 1043.46675467771 1043.46564993586 61.353 2 0.10866411673638253 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A', 'ENST00000588329.5_1_19:13056723-13059660:+|nuORF', 'nc|ENSG00000179262|P54725-2|RAD23A'] 126993 13387 VPWMPPGKSSA True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 56.353 2 0.10865702831993834 0.0022306423027562182 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 90545 10534 RKFLETVEL True NCI_RA007_Epitope_Rep1 1133.6444591458899 1133.6433699358602 44.959 2 0.10865350562861371 0.0022306423027562182 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 126118 10686 VPEGFVIPR True H1975_Epitope_Rep3 1012.5705659296399 1012.56946993586 46.179 2 0.10865251178932064 0.0022306423027562182 0.9438714419765777 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 98512 19846 SILGKFAVV True PC9_epitope_Rep2 932.5695033004798 932.56840993586 81.729 2 0.1086425368456398 0.0022306423027562182 0.9438714419765777 ['DHRS1-METTL3|1|fusion', 'ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 27918 8471 FQNALLVR True H1975_Epitope_Rep1 959.5552502186699 959.55414993586 37.514 2 0.10864193103904288 0.0022306423027562182 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 44982 17171 IQIMKVEEI True PC9_epitope_Rep4 1101.61038213629 1101.60928993586 74.054 2 0.10862837441240072 0.0022306423027562182 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 25346 11951 FEGGVVIAA True H1975_Epitope_Rep2 861.4596184983299 861.4590749679301 51.048 1 0.10862626993425026 0.0022306423027562182 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 71840 19858 MPFGNVVSA True PC9_epitope_Rep1 920.4425885351999 920.44148993586 81.2 2 0.108625328570822 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 96888 6871 SETEATPVP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 31.348 1 0.10861466443872907 0.0022306423027562182 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 111381 14229 TLITDGMRSV True PC9_epitope_Rep6 1091.56449457303 1091.5633899358602 66.622 2 0.10860547984863343 0.0022306423027562182 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000397477.2_1_22:32665833-32665884:+|nuORF'] 134897 13338 YADPGVSFY True H1975_Epitope_Rep2 1017.44436235701 1017.44377496793 56.436 1 0.10860275321420249 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 121004 7024 VGFAEAAR True PC9_epitope_Rep1 819.4239016959499 819.42280993586 31.825 2 0.10859476617673867 0.0022306423027562182 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 104302 16654 SSELFTLTY True H1975_Epitope_Rep1 1059.51244191683 1059.5113499358602 69.447 2 0.10859279128932921 0.0022306423027562182 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 121 20045 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.5056249679301 83.082 1 0.10858726275940289 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 64615 15993 LREPLPATL True PC9_epitope_Rep1 1008.59678067748 1008.59568993586 66.327 2 0.10858594680508496 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 17171 13351 EHAEALLL True PC9_epitope_Rep6 894.4810822188999 894.47998993586 63.017 2 0.10858479923776156 0.0022306423027562182 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 86022 14850 QPITPGPSI True PC9_epitope_Rep5 908.4967322830399 908.49618496793 62.121 1 0.10857369350778956 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 6622 16752 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 76.927 2 0.10855886909728943 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 57125 11022 LEEPLTQVA True H1975_Epitope_Rep1 998.52842633414 998.5278749679301 47.357 1 0.10855398026759472 0.0022306423027562182 0.9438714419765777 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'ENST00000368302.3_1_1:156027838-156028159:+|nuORF', 'nc|ENSG00000116586|Q9Y2Q5-3|LAMTOR2'] 108711 3950 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 20.256 2 0.1085508665376145 0.0022306423027562182 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 103686 8367 SRDQSTPII True PC9_epitope_Rep2 1015.5298233164699 1015.52872993586 37.555 2 0.10854872749441005 0.0022306423027562182 0.9438714419765777 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 83690 10836 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 46.709 1 0.1085386067067658 0.0022306423027562182 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 109967 18351 THSLPVVVI True PC9_epitope_Rep5 963.5753169569099 963.57420993586 75.604 2 0.1085381599087012 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 11990 7348 DHVTATQL True PC9_epitope_Rep5 883.4399456829101 883.43884993586 33.223 2 0.10853221805286598 0.0022306423027562182 0.9438714419765777 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant'] 31676 14611 GEIENIELP True H1975_Epitope_Rep2 1012.5076908895599 1012.50658993586 61.36 2 0.10851965080476794 0.0022306423027562182 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 37743 11893 HAVGDIPGV True PC9_epitope_Rep3 863.45011644379 863.44900993586 50.766 2 0.10851819162796002 0.0022306423027562182 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 90926 10582 RLELTELEA True H1975_Epitope_Rep1 1072.57643915572 1072.57534993586 45.658 2 0.1085117323251067 0.0022306423027562182 0.9438714419765777 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'ENST00000418039.2_1_15:78290504-78290759:-|nuORF', 'ENST00000491479.1_1_15:78290504-78294097:-|nuORF'] 130936 13890 VVINFDFPK True NCI_RA007_Epitope_Rep5 1077.5858816406098 1077.58478993586 60.106 2 0.10850874175239451 0.0022306423027562182 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 17726 7318 EHSTEGSVSL True PC9_epitope_Rep1 1044.47236801 1044.4712699358602 32.962 2 0.10850681795372379 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 1381 8172 AEEFKVPAA True H1975_Epitope_Rep1 960.4916469025998 960.49054993586 36.374 2 0.10850542655217449 0.0022306423027562182 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 140893 21847 YYVDFFKTL True PC9_epitope_Rep5 1194.5961119711399 1194.5950099358602 89.068 2 0.10850441713836834 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 8158 8991 ATFPLSVQK True NCI_RA007_Epitope_Rep4 989.55458151233 989.55348993586 41.418 2 0.10850347990299422 0.0022306423027562182 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 84876 8769 QHQSGIVQL True PC9_epitope_Rep6 1008.5352430500798 1008.53414993586 43.628 2 0.10849921860899223 0.0022306423027562182 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000494720.5_1_2:219129258-219130297:-|nuORF', 'ENST00000475678.5_1_2:219129258-219130549:-|nuORF'] 97590 14954 SHADLAGVPL True PC9_epitope_Rep2 978.5134449763399 978.51234993586 62.78 2 0.10849805503030445 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 1654 6770 AEGDVAALNR True PC9_epitope_Rep3 1014.5094222250599 1014.50832993586 31.062 2 0.10849765491876619 0.0022306423027562182 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 988 8679 AEAEALYSA True H1975_Epitope_Rep2 923.42362691243 923.42307496793 38.344 1 0.10849721896948065 0.0022306423027562182 0.9438714419765777 ['ENSG00000183891|ENST00000333610|TTC32'] 91150 18100 RLPETLPSL True PC9_epitope_Rep2 1024.59169529704 1024.5905899358602 74.924 2 0.10849432291800169 0.0022306423027562182 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 102253 12411 SPTGGFVDA True PC9_epitope_Rep5 849.3868474808899 849.3862949679301 52.738 1 0.10849204724216578 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 140706 20452 YYQEYPMSI True PC9_epitope_Rep5 1192.5110620178398 1192.51047496793 83.705 1 0.1084864588659331 0.0022306423027562182 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 123132 8535 VHDPAGALQAA True PC9_epitope_Rep2 1048.5301576696397 1048.5290699358602 38.192 2 0.10848474949348047 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 1392 8425 AEEFKVPAA True H1975_Epitope_Rep3 960.4916469025998 960.49054993586 37.391 2 0.10847908596693574 0.0022306423027562182 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 102032 6378 SPPPPPPPP True H1975_Epitope_Rep2 881.4647038787699 881.46360993586 29.46 2 0.10846779999264115 0.0022306423027562182 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 8181 9299 ATGENLPRV True PC9_epitope_Rep1 955.5086939490699 955.50758993586 40.623 2 0.10845390024764097 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 26747 20887 FLDGNEMTL True PC9_epitope_Rep2 1038.46919720586 1038.46808993586 85.785 2 0.10845337888830008 0.0022306423027562182 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 29082 20088 FTQDSNYLL True PC9_epitope_Rep3 1099.51858992643 1099.51748993586 82.521 2 0.1084464462903835 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 76628 8187 NTIDPSHPM True PC9_epitope_Rep2 1010.4491304676201 1010.44802993586 36.848 2 0.10844543810137428 0.0022306423027562182 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 8718 17973 AVDLTLPKV True PC9_epitope_Rep4 954.57498260374 954.57388993586 77.186 2 0.10844111075836672 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 102322 5773 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 27.597 2 0.10842111164597819 0.0022306423027562182 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 96983 8077 SEVKFAVQA True H1975_Epitope_Rep2 977.5181960036099 977.51708993586 36.016 2 0.10841381042593447 0.0022306423027562182 0.9438714419765777 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000479557.1_1_21:47690305-47692506:-|nuORF'] 40424 9149 HRYGDSEFTV True PC9_epitope_Rep4 1209.54145062933 1209.5398049037901 42.783 3 0.1084072993926975 0.0022306423027562182 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 19984 12671 EMEEKYYRF True PC9_epitope_Rep5 1293.5699738762899 1293.5688699358602 53.743 2 0.10840560855333108 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 76632 8927 NTIDPSHPM True PC9_epitope_Rep3 1010.4491304676201 1010.44802993586 39.288 2 0.10840273938341918 0.0022306423027562182 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 96407 5986 SEIDM[Oxidation]SVKA True H1975_Epitope_Rep1 994.46411220586 994.46300993586 28.096 2 0.10839893015801455 0.0022306423027562182 0.9438714419765777 ['ENSG00000144136|ENST00000272542|SLC20A1', 'ENST00000490674.1_1_2:113416785-113418150:+|nuORF'] 48854 12122 KESEVFYEL True NCI_RA007_Epitope_Rep5 1142.54955570154 1142.5484499358602 53.281 2 0.10839711566514083 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 625 17452 AASTLVTWL True H1975_Epitope_Rep3 960.52803241132 960.52748496793 72.828 1 0.10839276552550403 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 88364 4724 QYNPHVHQL True NCI_RA007_Epitope_Rep4 1134.55704112382 1134.55540490379 24.601 3 0.10837861891453546 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 35160 6634 GSDCTTIHY True H1975_Epitope_Rep3 995.4018459220301 995.40074993586 30.472 2 0.10837789622917335 0.0022306423027562182 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.Y236C|3|0.43|ENSG00000141510|chr17:7674256-7674256|T/C|missense_variant'] 42593 5698 IESSSPEV True H1975_Epitope_Rep2 846.39707781142 846.3965249679301 26.914 1 0.1083768570339243 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2'] 49387 19286 KIIGIMEEV True PC9_epitope_Rep5 1030.5732683515798 1030.57216993586 79.227 2 0.10837523598234175 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 108905 6943 TESQALVSA True H1975_Epitope_Rep3 904.4501760134399 904.44906993586 31.667 2 0.10836281735866662 0.0022306423027562182 0.9438714419765777 ['ENST00000487995.1_1_1:212957698-212965105:-|nuORF', 'nc|ENSG00000117697|Q96IY1-2|NSL1', 'ENSG00000117697|ENST00000366977|NSL1'] 92112 10475 RPYQPLPEA True PC9_epitope_Rep3 1069.55564414149 1069.5545499358602 45.23 2 0.10836050781716015 0.0022306423027562182 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 43280 14844 IHDGMNLEL True PC9_epitope_Rep6 1040.49608066004 1040.49498993586 69.07 2 0.10835091452502006 0.0022306423027562182 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 140805 17114 YYSPHGHILVL True PC9_epitope_Rep3 1297.68190728377 1297.68025490379 70.983 3 0.10834573581760491 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 135191 9221 YAVEGRDL True PC9_epitope_Rep4 921.4555957470499 921.45448993586 43.066 2 0.10834349667105395 0.0022306423027562182 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 87004 10275 QRYSEDRIGL True PC9_epitope_Rep1 1235.6258489596298 1235.62420490379 44.407 3 0.1083386612887802 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 96447 11014 SEILYSAPP True H1975_Epitope_Rep2 975.49131254943 975.4907649679301 47.393 1 0.1083385360074879 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 110466 13317 TIPEAFRGV True PC9_epitope_Rep6 988.5341804209198 988.53308993586 62.88 2 0.10833817890175998 0.0022306423027562182 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 131298 21062 VVQPLLVSV True PC9_epitope_Rep5 952.5957180483199 952.59516496793 86.075 1 0.1083288405089786 0.0022306423027562182 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 115816 14796 TVMDSKIVQV True PC9_epitope_Rep1 1118.60054572858 1118.59944993586 61.733 2 0.10832720146945649 0.0022306423027562182 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 30120 11180 FYQEHPDL True PC9_epitope_Rep2 1047.4661604307498 1047.4650699358601 48.33 2 0.10831721987032801 0.0022306423027562182 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 1788 7459 AEIAESVQA True H1975_Epitope_Rep2 916.45017601344 916.44962496793 33.638 1 0.10831398277188123 0.0022306423027562182 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 139069 21055 YSLEKVFGI True PC9_epitope_Rep5 1054.5698972233 1054.5688099358601 86.048 2 0.10831394272389402 0.0022306423027562182 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 97007 6646 SEVPVTASA True H1975_Epitope_Rep2 859.42871229287 859.42816496793 30.471 1 0.10830578993123888 0.0022306423027562182 0.9438714419765777 ['ENST00000420416.1_3_10:14920949-14938948:+|nuORF', 'ENST00000313519.9_2_10:14920918-14938948:+|nuORF'] 34668 23299 GQLDFSEFL True PC9_epitope_Rep5 1054.49712620586 1054.4960299358602 94.6 2 0.10830454237785148 0.0022306423027562182 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 39572 16619 HPIEPVLITA True PC9_epitope_Rep5 1088.62299542532 1088.62188993586 68.93 2 0.10830390696431633 0.0022306423027562182 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 31464 10277 GEEEPPALP True H1975_Epitope_Rep2 937.4392769765698 937.43816993586 44.537 2 0.10830104809874264 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 73285 5529 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.5074749679301 26.317 1 0.10829752510583203 0.0022306423027562182 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 96563 11485 SELPTTVTV True H1975_Epitope_Rep1 945.50187723313 945.50132496793 49.16 1 0.10829582394191678 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1', 'nc|ENSG00000106459|Q16656-3|NRF1'] 4258 22018 AIIGGMFTV True PC9_epitope_Rep2 907.48372507119 907.48317496793 90.163 1 0.10829398208957838 0.0022306423027562182 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 38584 10896 HHGTSILTL True PC9_epitope_Rep2 977.52942939365 977.52832993586 47.229 2 0.10827094688506643 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-5|PARPBP'] 104129 5554 SRYSSTETL True PC9_epitope_Rep2 1042.49310345458 1042.49200993586 26.753 2 0.10826107933249823 0.0022306423027562182 0.9438714419765777 ['ARHGEF17|p.G618Wfs*4|1|0.39|ENSG00000110237|chr11:73310481-73310482|-/C|frameshift_variant', 'ENSG00000110237|ENST00000263674|ARHGEF17'] 76837 10210 NVHAVFQEA True PC9_epitope_Rep1 1013.4930438849299 1013.49194993586 44.151 2 0.108259236508135 0.0022306423027562182 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 104927 6013 STFSTNYR True PC9_epitope_Rep4 974.4457593393399 974.44466993586 30.105 2 0.10825899824166238 0.0022306423027562182 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 101832 17348 SPILVATAV True PC9_epitope_Rep6 869.52221875489 869.52112993586 79.343 2 0.1082527302026427 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 89654 9262 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 40.584 2 0.10824705526811013 0.0022306423027562182 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 132641 15232 VYQHLFTRI True PC9_epitope_Rep1 1175.6451278522297 1175.64349490379 63.41 3 0.10824068859721947 0.0022306423027562182 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 114006 6890 TRLQQAQAL True PC9_epitope_Rep2 1027.5774422152297 1027.5763499358602 31.905 2 0.10823473119744645 0.0022306423027562182 0.9438714419765777 ['ENSG00000267368|ENST00000340457|UPK3BL1'] 67157 12944 LTDEQLLY True H1975_Epitope_Rep3 993.50187723313 993.50078993586 55.019 2 0.10822777362147996 0.0022306423027562182 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R'] 101145 6864 SLVNLGGSK True NCI_RA007_Epitope_Rep5 873.4919812557699 873.49088993586 33.085 2 0.10822226594089285 0.0022306423027562182 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 114354 13222 TSDELQFGY True H1975_Epitope_Rep2 1058.4556553167 1058.45507496793 55.986 1 0.10822021300510533 0.0022306423027562182 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 31450 9103 GEDYDERVLP True H1975_Epitope_Rep1 1191.54078192299 1191.53968993586 39.918 2 0.10821435685965798 0.0022306423027562182 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 70980 16352 MEQISQFLQAA True H1975_Epitope_Rep1 1264.61217304144 1264.61106993586 68.257 2 0.10820850182217572 0.0022306423027562182 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 102821 20933 SQFPGAITL True PC9_epitope_Rep3 932.4967322830399 932.49562993586 85.796 2 0.10820546275684527 0.0022306423027562182 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 136546 13837 YHSEVPVSL True PC9_epitope_Rep2 1029.51311062317 1029.51200993586 58.508 2 0.10820183032933046 0.0022306423027562182 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 43250 20050 IHDGFGFM[Oxidation]L True PC9_epitope_Rep2 1051.4797027003501 1051.47860993586 82.528 2 0.10819731791992428 0.0022306423027562182 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 52650 17609 KQFDKILEL True PC9_epitope_Rep5 1132.6492101731599 1132.64755490379 72.742 3 0.10819720047335332 0.0022306423027562182 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 88444 14251 QYTQALEKF True PC9_epitope_Rep1 1126.5658744720197 1126.56476993586 59.641 2 0.1081899661226899 0.0022306423027562182 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 31779 14646 GELPITVSV True H1975_Epitope_Rep1 913.51204799401 913.51149496793 61.548 1 0.10818161138180182 0.0022306423027562182 0.9438714419765777 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF', 'WDR19|p.K475*|1|0.42|ENSG00000157796|chr4:39218047-39218048|-/T|frameshift_variant', 'nc|ENSG00000157796|Q8NEZ3-2|WDR19'] 135230 12335 YAYDGKDYL True PC9_epitope_Rep6 1106.4920408254197 1106.49094993586 58.849 2 0.10817985418649173 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 38725 17690 HHSSVIFIF True PC9_epitope_Rep6 1085.56581490237 1085.56470993586 80.679 2 0.10817470886714176 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 98424 21958 SIIQRLLEV True PC9_epitope_Rep1 1069.64954452633 1069.64844993586 89.28 2 0.10817192031701729 0.0022306423027562182 0.9438714419765777 ['ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 102823 20133 SQFPGAITL True PC9_epitope_Rep4 932.4967322830399 932.49618496793 85.577 1 0.1081668867817636 0.0022306423027562182 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 138813 7725 YSDKEFAGSY True H1975_Epitope_Rep1 1165.49276910141 1165.49166993586 34.676 2 0.10816474961375824 0.0022306423027562182 0.9438714419765777 ['ENSG00000109436|ENST00000442267|TBC1D9', 'ENST00000514787.1_1_4:141591792-141598206:-|nuORF'] 21132 20296 ERDRLILFL True PC9_epitope_Rep2 1173.6869926642098 1173.6858899358601 83.49 2 0.10815549156218048 0.0022306423027562182 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 86459 8978 QQSELQSQV True PC9_epitope_Rep5 1045.5040024914501 1045.50290993586 39.477 2 0.10815117954487166 0.0022306423027562182 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1', 'nc|ENSG00000078114|O76041-2|NEBL'] 115581 21617 TVIATNILL True PC9_epitope_Rep5 956.59063266788 956.58952993586 88.19 2 0.10814686215255419 0.0022306423027562182 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 3881 10439 AHDDGRWSL True PC9_epitope_Rep3 1055.47845644995 1055.47734993586 45.091 2 0.10813166640421079 0.0022306423027562182 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 72458 23529 MTVDDLLSL True PC9_epitope_Rep1 1005.5052483614099 1005.5046749679301 95.293 1 0.10813000643342029 0.0022306423027562182 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 111616 5613 TLNQIDSVK True H1975_Epitope_Rep1 1016.5502244078799 1016.54912993586 26.657 2 0.10812309154185643 0.0022306423027562182 0.9438714419765777 ['CON__P12763'] 135067 23722 YALDLSTFL True PC9_epitope_Rep5 1041.53826274185 1041.5371699358602 96.227 2 0.10812131524509133 0.0022306423027562182 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 91155 17397 RLPETLPSL True PC9_epitope_Rep4 1024.59169529704 1024.5905899358602 74.912 2 0.1081169242697893 0.0022306423027562182 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 102924 17228 SQIHDIVLV True PC9_epitope_Rep5 1022.5760452328999 1022.5754749679301 71.285 1 0.10811629507461556 0.0022306423027562182 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 102751 4343 SQEGRPVQV True PC9_epitope_Rep2 998.5145076054997 998.51340993586 22.053 2 0.10811585666026365 0.0022306423027562182 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 35554 14737 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.5172549679301 61.952 1 0.10811542940973169 0.0022306423027562182 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 89257 8685 RELDPSLVSA True H1975_Epitope_Rep1 1085.57168812845 1085.5705899358602 38.337 2 0.10811270918027134 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 112585 6354 TPAPSAPAA True PC9_epitope_Rep5 781.39701824177 781.39646496793 29.416 1 0.1080996118877209 0.0022306423027562182 0.9438714419765777 ['ENSG00000130706|ENST00000253003|ADRM1'] 40810 15663 HVIGSLAEI True PC9_epitope_Rep2 937.5232813840499 937.52218993586 65.523 2 0.10809272194298097 0.0022306423027562182 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant', 'nc|ENSG00000133704|O15397-2|IPO8'] 47701 16666 IYPVKYTQTF True PC9_epitope_Rep1 1258.65977485686 1258.6586699358602 68.934 2 0.10806716837074942 0.0022306423027562182 0.9438714419765777 ['ENSG00000112378|ENST00000421351|PERP'] 40796 15296 HVGSGDLFSGM True PC9_epitope_Rep6 1105.48624425233 1105.4851499358601 70.954 2 0.10805382139855073 0.0022306423027562182 0.9438714419765777 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 103871 20786 SRLDSVLLL True PC9_epitope_Rep5 1014.6073453611799 1014.60624993586 85.005 2 0.10804788050116947 0.0022306423027562182 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 113389 19059 TQLGPPYHIL True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 78.34 2 0.10804209531839318 0.0022306423027562182 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 98403 21050 SIIGRLLEV True PC9_epitope_Rep2 998.6124307416198 998.61132993586 86.423 2 0.10803887581854893 0.0022306423027562182 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 35048 6101 GRDENSVEL True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 31.871 2 0.10803142480964606 0.0022306423027562182 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 7610 8729 ASITALEAK True PC9_epitope_Rep1 902.50729696674 902.50618993586 38.413 2 0.10802462215225689 0.0022306423027562182 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 11813 17268 DHLLSVSL True PC9_epitope_Rep6 882.4810822189 882.47998993586 79.021 2 0.10801872031203283 0.0022306423027562182 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 102688 4707 SQDPGTHVV True PC9_epitope_Rep5 938.4457593393399 938.44466993586 23.157 2 0.10801366801690922 0.0022306423027562182 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 134899 13249 YADPGVSFY True H1975_Epitope_Rep3 1017.44436235701 1017.44377496793 56.218 1 0.10801013255710011 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 11807 19081 DHLLSVSL True PC9_epitope_Rep2 882.4810822189 882.47998993586 78.759 2 0.1079998744677555 0.0022306423027562182 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 130411 10796 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.49037496793 49.509 1 0.10799469978752288 0.0022306423027562182 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 427 19728 AALPQVVAV True PC9_epitope_Rep3 866.5225531080599 866.52144993586 81.113 2 0.10799403089651245 0.0022306423027562182 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF'] 83966 20265 QELLYVVPFVA True H1975_Epitope_Rep1 1276.70672504928 1276.70562993586 84.297 2 0.10799249722324977 0.0022306423027562182 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 71326 18430 MHGIDPVVL True PC9_epitope_Rep3 979.5160878286299 979.51498993586 76.095 2 0.10799079340446588 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 75624 10537 NQSDTSVSL True PC9_epitope_Rep2 949.43525422529 949.43414993586 45.851 2 0.10797301284795165 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 1931 8484 AEIPEEHIP True H1975_Epitope_Rep1 1033.50802524273 1033.5069299358602 37.563 2 0.10797174763335063 0.0022306423027562182 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 139160 17864 YSSEIWDLY True H1975_Epitope_Rep2 1174.51825557326 1174.51714993586 74.033 2 0.10796069140383886 0.0022306423027562182 0.9438714419765777 ['ENST00000345122.7_1_14:32559748-32559826:+|nuORF'] 20752 20661 EQLGTFTTL True PC9_epitope_Rep1 1008.51277627 1008.51227496793 84.294 1 0.10795822902008945 0.0022306423027562182 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 1861 9775 AEIETELQA True H1975_Epitope_Rep2 1002.4869554449798 1002.48584993586 42.586 2 0.10795813697900362 0.0022306423027562182 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A'] 72522 20593 M[Oxidation]VDGTLLLL True PC9_epitope_Rep6 989.5467196310099 989.54562993586 91.94 2 0.10794929732851721 0.0022306423027562182 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 25979 19927 FGYPFRLNEA True PC9_epitope_Rep5 1212.5927579262 1212.5916699358602 81.705 2 0.10794893895076024 0.0022306423027562182 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 6598 18504 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 76.512 2 0.10794536877868584 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 32711 7773 GHSGPITSI True PC9_epitope_Rep2 867.4450310633501 867.44392993586 35.272 2 0.1079381506209271 0.0022306423027562182 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF', 'PRPF19|p.F388L|1|0.17|ENSG00000110107|chr11:60898250-60898250|A/G|missense_variant'] 33588 19416 GLLAVLRPL True PC9_epitope_Rep4 950.6276868829399 950.62658993586 82.795 2 0.10793547559514065 0.0022306423027562182 0.9438714419765777 ['ENSG00000168569|ENST00000307366|TMEM223'] 96233 5023 SEEPETPAA True H1975_Epitope_Rep3 929.3978060874099 929.39725496793 24.442 1 0.10793302070885746 0.0022306423027562182 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 76157 8528 NRSDPVTL True PC9_epitope_Rep3 900.46649478392 900.46538993586 37.759 2 0.10792363319606285 0.0022306423027562182 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 114400 8532 TSDSTVYDY True H1975_Epitope_Rep1 1049.41893545481 1049.41837496793 37.747 1 0.10791578288026892 0.0022306423027562182 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 76084 7128 NRMLAQQAV True PC9_epitope_Rep2 1029.53894853153 1029.53784993586 32.811 2 0.1079132045088701 0.0022306423027562182 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 11895 4700 DHQQNSPTL True PC9_epitope_Rep4 1038.47303671634 1038.47192993586 24.62 2 0.10791205823892563 0.0022306423027562182 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1'] 105947 20468 SVLGAITSV True PC9_epitope_Rep2 845.48583324617 845.48528496793 84.159 1 0.10791002634995281 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 70778 6060 MEEIQNESA True H1975_Epitope_Rep2 1049.43353997313 1049.4324499358602 28.288 2 0.10788348886763144 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 60082 13008 LHSNGFSL True PC9_epitope_Rep5 873.4344663796501 873.43336993586 55.043 2 0.10786875723421445 0.0022306423027562182 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 61356 5325 LLEGEETR True H1975_Epitope_Rep3 945.4767251144499 945.47562993586 25.555 2 0.10786698572797324 0.0022306423027562182 0.9438714419765777 ['ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 31615 11202 GEGLESYVA True H1975_Epitope_Rep2 923.4236269124299 923.42307496793 48.127 1 0.10786382614243974 0.0022306423027562182 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 87480 4802 QTETKTITY True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 23.56 2 0.10785751709842525 0.0022306423027562182 0.9438714419765777 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF', 'EPB41L3|p.H979Q|1|0.29|ENSG00000082397|chr18:5396237-5396237|G/T|missense_variant'] 20971 20651 ERADLIAYL True PC9_epitope_Rep3 1062.57095985246 1062.5698699358602 84.705 2 0.10785600304723601 0.0022306423027562182 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 32728 10906 GHVAPSVSL True PC9_epitope_Rep3 865.4657665079301 865.46466993586 46.932 2 0.10785420969695245 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 8120 12195 ATESVSLYY True H1975_Epitope_Rep2 1031.48114178855 1031.48057496793 51.991 1 0.10785332857566274 0.0022306423027562182 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 86333 12948 QQITENPQL True PC9_epitope_Rep1 1069.54038800017 1069.53928993586 54.676 2 0.10784605744863471 0.0022306423027562182 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'ENST00000533705.5_1_9:86284090-86294929:-|nuORF'] 31560 8629 GEFRQGLISA True NCI_RA007_Epitope_Rep3 1076.56145779792 1076.56036993586 41.017 2 0.10784152829197234 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 101904 12606 SPLLLQAKA True PC9_epitope_Rep1 939.5753169569099 939.57420993586 53.357 2 0.10784042283055918 0.0022306423027562182 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 95647 11867 SAVPPGTSL True PC9_epitope_Rep3 827.43888305375 827.43778993586 50.665 2 0.10782110601106043 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 35569 15628 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.5172549679301 65.124 1 0.10781056793790075 0.0022306423027562182 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 60171 11888 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 53.503 2 0.10780796583394472 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 113138 15091 TQAPPNVVL True PC9_epitope_Rep4 937.5232813840499 937.52218993586 65.981 2 0.10779799167067161 0.0022306423027562182 0.9438714419765777 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 105091 10924 STLDIVLANK True NCI_RA007_Epitope_Rep5 1072.61282466444 1072.61172993586 48.659 2 0.10778341691752848 0.0022306423027562182 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 26734 20796 FLDGNELTL True PC9_epitope_Rep4 1020.51277627 1020.51166993586 88.14 2 0.1077828254666399 0.0022306423027562182 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 32370 5474 GGEIQPVSVK True NCI_RA007_Epitope_Rep5 1012.5553097883198 1012.55420993586 27.743 2 0.10777614352981221 0.0022306423027562182 0.9438714419765777 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF', 'ENST00000465573.1_1_2:198365552-198367980:+|nuORF'] 95629 12834 SAVFMVTRL True H1975_Epitope_Rep2 1022.5582869937799 1022.55718993586 54.476 2 0.10777530463396488 0.0022306423027562182 0.9438714419765777 ['ENST00000380189.8_1_12:50527593-50531570:-|nuORF', 'nc|ENSG00000139624|Q8N5B7-2|CERS5', 'ENSG00000139624|ENST00000317551|CERS5', 'ENST00000547138.5_1_12:50529516-50531570:-|nuORF', 'ENST00000546676.1_1_12:50529513-50531570:-|nuORF'] 118705 4151 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 21.087 2 0.10777185667971872 0.0022306423027562182 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 26133 13860 FHGPPEPVL True PC9_epitope_Rep4 991.5127167003499 991.51160993586 61.214 2 0.10776598993288 0.0022306423027562182 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B'] 83701 5410 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.46432993586 25.841 2 0.10776355170877565 0.0022306423027562182 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 965 5972 AEAAPPLRP True H1975_Epitope_Rep2 920.50796567308 920.50686993586 27.95 2 0.10776053359856208 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 138322 17027 YRAPEVLL True PC9_epitope_Rep1 959.5440168286299 959.54290993586 70.318 2 0.1077603380034657 0.0022306423027562182 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 7455 12421 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep2 1084.4746768895598 1084.47356993586 52.863 2 0.10775938385594637 0.0022306423027562182 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 40696 8173 HTMEFALVK True NCI_RA007_Epitope_Rep5 1074.55320161334 1074.55210993586 38.12 2 0.10775223312816837 0.0022306423027562182 0.9438714419765777 ['ENSG00000182636|ENST00000649030|NDN'] 70740 17202 MEALPLLAA True H1975_Epitope_Rep2 927.5099398190299 927.50939496793 71.459 1 0.10774697810497431 0.0022306423027562182 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 43866 16393 ILDEAIYKV True PC9_epitope_Rep4 1062.5961119711399 1062.5950099358602 71.017 2 0.10773687397164183 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 70571 8849 LYWSHPRKF True PC9_epitope_Rep4 1232.6454622053996 1232.6438249037901 41.569 3 0.1077359328738922 0.0022306423027562182 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 15212 18680 EAFQLFDR True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 76.873 2 0.10772562980782695 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549017.5_1_12:56552185-56553840:+|nuORF'] 3993 20461 AHFPINVVI True PC9_epitope_Rep5 1008.5756513100799 1008.57454993586 83.74 2 0.10772494704612612 0.0022306423027562182 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 19308 11161 ELLTTMGDR True PC9_epitope_Rep2 1034.5066453437398 1034.50554993586 48.256 2 0.10772447376378126 0.0022306423027562182 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL12A|p.R123G|1|0.11|ENSG00000101608|chr18:3255769-3255769|A/G|missense_variant', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 89607 7993 RESSVLLSP True H1975_Epitope_Rep3 986.53965972418 986.53856993586 35.715 2 0.10772416375824562 0.0022306423027562182 0.9438714419765777 ['ENST00000374647.9_1_9:111693343-111696326:-|nuORF'] 91546 20271 RPAGALVALVV True PC9_epitope_Rep1 1064.67061432408 1064.66950993586 82.8 2 0.10772405939439969 0.0022306423027562182 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 23237 17754 EVRDAAFEAL True PC9_epitope_Rep3 1119.5560380643099 1119.5549499358601 73.487 2 0.10771858337639167 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant'] 13100 6527 DLSELVEK True NCI_RA007_Epitope_Rep1 931.4862271689899 931.48512993586 29.404 2 0.10770721094299304 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G', 'ENST00000446144.2_1_15:20773467-20778061:+|nuORF', 'nc|ENSG00000290359|Q0D2H9|GOLGA8DP'] 115580 21602 TVIATNILL True PC9_epitope_Rep3 956.59063266788 956.58952993586 88.387 2 0.10770693055177137 0.0022306423027562182 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 14345 12546 DTDSINLY True H1975_Epitope_Rep2 939.4185415319901 939.41744993586 53.353 2 0.10770097257895442 0.0022306423027562182 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61719906-61720176:-|nuORF'] 119696 5822 VETDHIVAA True H1975_Epitope_Rep3 953.4818104948898 953.48070993586 27.415 2 0.10769935720477103 0.0022306423027562182 0.9438714419765777 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-3|AIFM1', 'nc|ENSG00000156709|O95831-5|AIFM1', 'nc|ENSG00000156709|O95831-2|AIFM1'] 78175 6467 PAPPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 31.474 2 0.10769643070396719 0.0022306423027562182 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 97594 16936 SHADVVNLL True PC9_epitope_Rep1 966.51344497634 966.51234993586 69.967 2 0.10769328904022225 0.0022306423027562182 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 108549 8684 TEGGGVFTA True H1975_Epitope_Rep3 837.38684748089 837.3862949679301 38.402 1 0.10768819191609492 0.0022306423027562182 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 96598 7581 SELVSNGV True H1975_Epitope_Rep3 803.40249754503 803.40194496793 34.141 1 0.10768761208986716 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF', 'ENST00000517342.1_1_8:57389817-57390279:-|nuORF', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 124207 19203 VLAPLPLHGV True PC9_epitope_Rep1 1014.6226015025001 1014.62150993586 78.659 2 0.10768254268821519 0.0022306423027562182 0.9438714419765777 ['RNF130|p.N172Tfs*6|1|0.34|ENSG00000113269|chr5:180013239-180013239|T/-|frameshift_variant', 'nc|ENSG00000113269|Q86XS8-2|RNF130', 'ENSG00000113269|ENST00000521389|RNF130'] 101529 8157 SPALLREA True PC9_epitope_Rep4 855.48141657207 855.48030993586 38.83 2 0.10767927227555661 0.0022306423027562182 0.9438714419765777 ['ENSG00000158863|ENST00000289921|FHIP2B'] 123208 13693 VHLDSAVAL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 60.559 2 0.10766895652516908 0.0022306423027562182 0.9438714419765777 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 43875 16630 ILDEVIMGY True H1975_Epitope_Rep2 1051.5259838059899 1051.52488993586 69.198 2 0.10764918739638728 0.0022306423027562182 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 1071 5061 AEALPVSHGA True H1975_Epitope_Rep2 950.4821448480601 950.48104993586 24.549 2 0.10764500870357675 0.0022306423027562182 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000542958.5_1_12:64816967-64819028:+|nuORF'] 97843 11762 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 56.403 2 0.10763245567928567 0.0022306423027562182 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 108927 7984 TETDSLVSA True H1975_Epitope_Rep3 921.4291062156899 921.42855496793 35.68 1 0.10762928088925408 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183881502-183882771:+|nuORF'] 97732 15381 SHFVSDVVI True PC9_epitope_Rep4 1001.5181960036099 1001.51708993586 67.095 2 0.10761558247205583 0.0022306423027562182 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 33714 6775 GLQVVAVK True H1975_Epitope_Rep3 812.5119884243599 812.51088993586 31.016 2 0.10760450959994654 0.0022306423027562182 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30260216-30260456:-|nuORF', 'ENSG00000083457|ENST00000263087|ITGAE'] 65300 5245 LSEKPPYSKY True H1975_Epitope_Rep3 1210.6233893481399 1210.6217549037901 25.259 3 0.10760311167040619 0.0022306423027562182 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 9026 18684 AVIGDVIRV True PC9_epitope_Rep1 940.57056592964 940.56946993586 76.658 2 0.1076029264813526 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 9532 20010 AYAENIALL True PC9_epitope_Rep4 976.5229470308799 976.52184993586 85.102 2 0.10759518964872303 0.0022306423027562182 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 95983 12176 SEAEIFYNA True H1975_Epitope_Rep2 1042.46074069714 1042.46017496793 51.918 1 0.10759123957694805 0.0022306423027562182 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 114154 13073 TRSQPFTL True PC9_epitope_Rep1 948.5028802926399 948.50178993586 55.153 2 0.10758807385886762 0.0022306423027562182 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 11918 13057 DHSGQVTIL True PC9_epitope_Rep3 968.49270953176 968.49160993586 55.25 2 0.10758499066558139 0.0022306423027562182 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 672 5614 AAVADPHSL True NCI_RA007_Epitope_Rep5 879.4450310633501 879.44392993586 28.283 2 0.10757563213764035 0.0022306423027562182 0.9438714419765777 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000594962.5_1_19:17611587-17615418:+|nuORF', 'nc|ENSG00000130304|Q6PCB7-2|SLC27A1'] 124640 20634 VLIENVASL True PC9_epitope_Rep2 956.5542471591599 956.55369496793 84.803 1 0.10757368896011597 0.0022306423027562182 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 33185 13758 GKVQIPIML True NCI_RA007_Epitope_Rep5 997.5994235297699 997.59832993586 59.601 2 0.10757187167299531 0.0022306423027562182 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 109767 13007 THISDTSVVL True PC9_epitope_Rep2 1070.56078909158 1070.5596899358602 55.317 2 0.10757056028316064 0.0022306423027562182 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 84295 15273 QEYVTFLGA True H1975_Epitope_Rep2 1026.5022115862998 1026.5016749679298 63.905 1 0.10756827882107718 0.0022306423027562182 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 25516 7962 FEQEMATAA True NCI_RA007_Epitope_Rep2 996.4222470134398 996.4216949679301 35.602 1 0.10756717527091424 0.0022306423027562182 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 70373 14978 LYQDHMQYI True PC9_epitope_Rep2 1209.54884450889 1209.54774993586 62.869 2 0.1075666336131954 0.0022306423027562182 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 7555 17231 ASFNDTFVHV True PC9_epitope_Rep4 1135.5298233164701 1135.52927496793 74.287 1 0.10756506299229006 0.0022306423027562182 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 88207 13408 QYAPSTAQF True PC9_epitope_Rep4 1011.4661604307499 1011.46506993586 59.476 2 0.10756326801524033 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 39484 8557 HPADSVVSV True PC9_epitope_Rep1 909.4555957470501 909.45448993586 37.752 2 0.10756112170913272 0.0022306423027562182 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 85054 16311 QILEGVHYL True PC9_epitope_Rep6 1070.5760452329 1070.57494993586 75.104 2 0.10755774405736165 0.0022306423027562182 0.9438714419765777 ['ENSG00000169967|ENST00000682094|MAP3K2'] 46180 8576 ITDHGSLIY True H1975_Epitope_Rep2 1017.51311062317 1017.51200993586 37.941 2 0.10754677945331115 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 24590 21643 FAMEIDPSL True PC9_epitope_Rep3 1021.4790336135699 1021.47792993586 88.548 2 0.1075311385050658 0.0022306423027562182 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 42378 10296 IENGHIFTV True H1975_Epitope_Rep2 1028.52909504048 1028.5279899358602 44.609 2 0.10752351957797471 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'nc|ENSG00000036257|Q13618-3|CUL3', 'SPAG16-CUL3|1|fusion'] 7218 12999 ARDNTINLI True PC9_epitope_Rep4 1028.56145779792 1028.56036993586 57.894 2 0.10751100377343978 0.0022306423027562182 0.9438714419765777 ['ENSG00000163466|ENST00000315717|ARPC2'] 139137 9999 YSQLVVETIR True NCI_RA007_Epitope_Rep5 1206.66083748602 1206.6597499358602 45.102 2 0.10750574211018285 0.0022306423027562182 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 21784 8486 ESDGKSRWFY True H1975_Epitope_Rep2 1273.5727507576098 1273.57111490379 37.593 3 0.10750305021976841 0.0022306423027562182 0.9438714419765777 ['ENSG00000146476|ENST00000367294|ARMT1'] 110162 6199 TIDDLEEK True PC9_epitope_Rep4 961.46040634397 961.45930993586 30.883 2 0.10749374601665841 0.0022306423027562182 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'ENST00000368528.3_1_3:27674554-27675208:+|nuORF'] 21245 7483 ERHPQTIVL True PC9_epitope_Rep4 1091.60874234351 1091.60764993586 36.144 2 0.10747422847430514 0.0022306423027562182 0.9438714419765777 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 9372 22064 AVVDSILAI True PC9_epitope_Rep2 899.53278343859 899.5322349679301 90.341 1 0.1074660724747582 0.0022306423027562182 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 105473 6313 SVASPFTSK True NCI_RA007_Epitope_Rep5 922.4759968384601 922.47488993586 30.961 2 0.1074659265888143 0.0022306423027562182 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4', 'ENSG00000187527|ENST00000342358|ATP13A5'] 114279 8817 TSALPIIQK True NCI_RA007_Epitope_Rep1 969.58588164061 969.5853349679301 38.299 1 0.10746518894154618 0.0022306423027562182 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000475923.1_1_9:19126103-19126313:-|nuORF', 'ENST00000472715.1_1_9:19126103-19127487:-|nuORF'] 34517 6643 GQEDHYNNL True PC9_epitope_Rep1 1088.45230127176 1088.45120993586 30.356 2 0.10746257501550242 0.0022306423027562182 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 35298 7595 GSSAINILK True NCI_RA007_Epitope_Rep3 901.5232813840499 901.52218993586 37.007 2 0.10746138547711645 0.0022306423027562182 0.9438714419765777 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 95674 7537 SAVTSVAKV True PC9_epitope_Rep5 860.4967322830399 860.49562993586 33.938 2 0.10745865207941578 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27', 'IFI27|p.S8L|1|0.19|ENSG00000165949|chr14:94111705-94111705|C/T|missense_variant'] 17850 8323 EIAQEFKTDLR True NCI_RA007_Epitope_Rep5 1348.6986795467199 1348.6970249037902 38.69 3 0.10745527230086796 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000273213|Q5TEC6|H3-7'] 38483 14098 HHANFPQYVM True PC9_epitope_Rep5 1242.5604122521001 1242.55930993586 59.239 2 0.10744728875400153 0.0022306423027562182 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF'] 107635 21366 TAIDILTTC True PC9_epitope_Rep1 949.4790336135701 949.4784849679301 87.016 1 0.10744645633306182 0.0022306423027562182 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 137594 20860 YLTDLQVSL True PC9_epitope_Rep4 1050.55972646242 1050.5586299358602 88.391 2 0.10743642594831652 0.0022306423027562182 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 46658 20665 ITVGSLVTV True PC9_epitope_Rep2 887.5327834385901 887.5322349679301 84.925 1 0.10743522905738054 0.0022306423027562182 0.9438714419765777 ['ENSG00000025796|ENST00000369002|SEC63', 'ENST00000425785.1_1_1:98011504-98011909:+|nuORF'] 106429 11670 SVTSHIYQV True PC9_epitope_Rep1 1032.5240096600398 1032.52290993586 49.765 2 0.10741715887767585 0.0022306423027562182 0.9438714419765777 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 103581 14486 SRDGMNIVL True PC9_epitope_Rep4 1003.5120650773499 1003.51096993586 63.631 2 0.10741437881474294 0.0022306423027562182 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 99107 22457 SLAEVLQQL True PC9_epitope_Rep2 999.5600608155898 999.55896993586 91.87 2 0.10741117426058534 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000482694.1_1_2:85577073-85578124:-|nuORF'] 94830 13179 RYLTVATVF True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 57.371 2 0.10740894688167547 0.0022306423027562182 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 113648 7857 TRDEDHIAL True PC9_epitope_Rep3 1068.51998690876 1068.5188899358602 35.208 2 0.10740595383650922 0.0022306423027562182 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 32596 9304 GHDASQITL True PC9_epitope_Rep2 940.46140940348 940.4608649679301 41.128 1 0.10739497526538695 0.0022306423027562182 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 27975 17743 FQSSAVMAL True PC9_epitope_Rep6 952.4688032830398 952.46770993586 80.884 2 0.10739417160551432 0.0022306423027562182 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 7225 19472 ARDSLPVLL True PC9_epitope_Rep5 982.58113061334 982.58002993586 79.953 2 0.10738843217935398 0.0022306423027562182 0.9438714419765777 ['ENST00000494870.5_1_X:2838537-2847316:-|nuORF', 'nc|ENSG00000006756|P51689-2|ARSD', 'nc|ENSG00000006756|P51689-3|ARSD', 'ENSG00000006756|ENST00000381154|ARSD'] 44075 23536 ILLPQFLGV True PC9_epitope_Rep3 998.6164534928998 998.61534993586 95.812 2 0.10738564388437576 0.0022306423027562182 0.9438714419765777 ['ENSG00000099282|ENST00000373290|TSPAN15'] 76326 14086 NSEITYSFY True H1975_Epitope_Rep2 1122.48695544498 1122.4858499358602 59.336 2 0.10738536033549465 0.0022306423027562182 0.9438714419765777 ['PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 84023 5578 QENTQTPTV True H1975_Epitope_Rep3 1016.47745339044 1016.47687496793 26.497 1 0.10738288391984188 0.0022306423027562182 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 28315 12853 FRYTAGTPY True PC9_epitope_Rep1 1074.5134449763398 1074.5123499358601 54.313 2 0.10738149799809206 0.0022306423027562182 0.9438714419765777 ['ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 96570 10280 SELPVSEVA True H1975_Epitope_Rep1 929.47057710485 929.46948993586 44.487 2 0.10737421440113798 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 101020 13208 SLTGRLDEV True PC9_epitope_Rep5 988.5189242795999 988.51782993586 55.813 2 0.10737316547817537 0.0022306423027562182 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6'] 8527 4065 ATVTPSPVK True NCI_RA007_Epitope_Rep4 898.5123823471799 898.51128993586 21.908 2 0.10737109090146434 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000069275|Q9H1E3-2|NUCKS1', 'ENSG00000069275|ENST00000367142|NUCKS1'] 4028 11516 AHLDATTVL True PC9_epitope_Rep6 939.5025459394701 939.50144993586 55.38 2 0.10736911965574648 0.0022306423027562182 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 90851 10260 RKVYSILSL True NCI_RA007_Epitope_Rep3 1077.65462990677 1077.6535299358602 47.432 2 0.10736433368550762 0.0022306423027562182 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 2234 7755 AENVAVPEA True NCI_RA007_Epitope_Rep4 898.4396113297399 898.4390649679301 36.507 1 0.10735988770326921 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 35679 4227 GTNPGIITK True NCI_RA007_Epitope_Rep3 899.50763131991 899.50652993586 23.295 2 0.1073596839099459 0.0022306423027562182 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 128357 6153 VSDPSSPQY True H1975_Epitope_Rep2 978.42944056886 978.4288949679301 28.64 1 0.10735716743880369 0.0022306423027562182 0.9438714419765777 ['ENST00000428886.6_1_11:6638445-6640631:-|nuORF', 'ENSG00000166340|ENST00000299427|TPP1', 'ENST00000524903.1_1_11:6639992-6640524:-|nuORF', 'ENST00000531754.1_1_11:6639992-6640658:-|nuORF'] 27320 15528 FMDPASALY True H1975_Epitope_Rep2 1013.45281886573 1013.4522749679301 64.883 1 0.10735343937495417 0.0022306423027562182 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 72849 8882 NAMEDAQTL True NCI_RA007_Epitope_Rep4 991.42806066987 991.42696993586 40.991 2 0.1073371373341942 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000196975|P09525|ANXA4', 'ENSG00000196975|ENST00000394295|ANXA4'] 135846 11088 YEQLSSEALEA True H1975_Epitope_Rep3 1238.56666231766 1238.56607496793 47.743 1 0.10732076862699003 0.0022306423027562182 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000489200.5_1_X:153627802-153628283:+|nuORF', 'ENST00000491035.5_1_X:153626749-153628283:+|nuORF'] 132504 6985 VYPERSTSY True PC9_epitope_Rep3 1100.51383889916 1100.51274993586 31.88 2 0.10731802201824621 0.0022306423027562182 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 6654 8898 AQAEVYKEL True PC9_epitope_Rep6 1049.53932537101 1049.53822993586 44.186 2 0.10731075860716607 0.0022306423027562182 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 77170 22866 NYGDYFNVF True PC9_epitope_Rep1 1137.47672511445 1137.4761749679299 92.747 1 0.10730093489091974 0.0022306423027562182 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 52192 15622 KMIEDLQNEL True PC9_epitope_Rep6 1231.61183868827 1231.6107499358602 72.295 2 0.10729647493076867 0.0022306423027562182 0.9438714419765777 ['ENSG00000198887|ENST00000361138|SMC5'] 113844 10610 TREEGTPLTL True PC9_epitope_Rep6 1115.5822528121498 1115.5811499358601 51.631 2 0.10729111329372416 0.0022306423027562182 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 88859 5102 REAEFTKSIA True H1975_Epitope_Rep3 1150.59823722946 1150.5965849037902 24.736 3 0.10728467659284735 0.0022306423027562182 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 43772 23059 IIYPGAFVDL True PC9_epitope_Rep1 1106.60119735158 1106.60010993586 93.497 2 0.10728093413530897 0.0022306423027562182 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 88909 5156 RECTIEATA True NCI_RA007_Epitope_Rep1 992.4596951513198 992.45858993586 24.139 2 0.10727888765185732 0.0022306423027562182 0.9438714419765777 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 128332 10140 VSDKTLSFY True H1975_Epitope_Rep2 1058.52842633414 1058.52732993586 44.003 2 0.10726882556808509 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 59159 10626 LGEYGFQNA True H1975_Epitope_Rep1 997.4505103666099 997.44940993586 45.829 2 0.10726800982816947 0.0022306423027562182 0.9438714419765777 ['CON__P02769'] 31617 12378 GEGLVTITP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 52.699 1 0.10726609201133051 0.0022306423027562182 0.9438714419765777 ['ENSG00000254986|ENST00000531863|DPP3', 'nc|ENSG00000254986|Q9NY33-4|DPP3'] 94931 12114 RYPDSHQLF True PC9_epitope_Rep1 1161.55670677065 1161.5550749037902 51.459 3 0.10725942950348324 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 105392 10414 SVADTVARV True PC9_epitope_Rep3 916.4977949121999 916.49668993586 44.996 2 0.10725794486521123 0.0022306423027562182 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 43550 6214 IIEAEESR True NCI_RA007_Epitope_Rep2 945.47672511445 945.47562993586 28.778 2 0.10725470536942668 0.0022306423027562182 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000465508.5_1_1:6695737-6697639:-|nuORF', 'MED15-DNAJC11|1|fusion'] 86368 8890 QQLGKVVQV True PC9_epitope_Rep4 997.5920296502098 997.59092993586 41.727 2 0.1072511932377929 0.0022306423027562182 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 24120 5270 EYSKQMQRF True PC9_epitope_Rep2 1215.57064258263 1215.56899490379 25.658 3 0.10725065870369864 0.0022306423027562182 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 32112 6149 GEYIIRQGA True NCI_RA007_Epitope_Rep5 1005.5243440132098 1005.52324993586 30.331 2 0.10724769539654253 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000185532|Q13976|PRKG1', 'ENSG00000185532|ENST00000373980|PRKG1', 'ENST00000373975.2_1_10:53806680-53893656:+|nuORF', 'PRKG1|p.K447Ifs*3|1|0.14|ENSG00000185532|chr10:52272415-52272424|GCAAATATTT/-|frameshift_variant'] 21290 14707 ERIPDVAAL True PC9_epitope_Rep6 982.5447451046199 982.54364993586 68.515 2 0.10724664983389535 0.0022306423027562182 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 67576 13368 LTESETEYVIR True H1975_Epitope_Rep1 1338.6667107121 1338.6656099358602 56.53 2 0.10724555157640486 0.0022306423027562182 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 34519 5525 GQEDHYNNL True PC9_epitope_Rep2 1088.45230127176 1088.45120993586 26.641 2 0.10724062360442596 0.0022306423027562182 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 132946 23252 VYTVVDEMFL True PC9_epitope_Rep5 1214.5893123385397 1214.58877496793 94.425 1 0.10724052198938579 0.0022306423027562182 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 110741 19820 TKFGGIVVL True PC9_epitope_Rep5 932.5695033004798 932.56840993586 81.285 2 0.1072379776229989 0.0022306423027562182 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 44231 20420 ILSSNIISV True PC9_epitope_Rep3 944.55424715916 944.55314993586 83.799 2 0.10722966066811991 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000204385|Q53GD3-3|SLC44A4', 'nc|ENSG00000204385|Q53GD3-4|SLC44A4', 'ENSG00000204385|ENST00000229729|SLC44A4', 'SLC44A4|p.N144Kfs*55|1|0.1|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant', 'SLC44A4|p.L257Wfs*5|1|0.35|ENSG00000204385|chr6:31870980-31870980|G/-|frameshift_variant'] 96313 8026 SEEVGIAEA True H1975_Epitope_Rep3 903.41854153199 903.41744993586 35.845 2 0.10722779012013169 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 99967 22908 SLINVGLISV True PC9_epitope_Rep5 1013.6120963884499 1013.6115749679301 93.108 1 0.10722387863174712 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 97956 9332 SHQTGVVAL True PC9_epitope_Rep3 910.4872302284999 910.48612993586 40.835 2 0.1072218477446687 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 52160 11821 KLVWVPSDK True PC9_epitope_Rep5 1070.6124307416198 1070.61132993586 50.466 2 0.10722152850899565 0.0022306423027562182 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 87800 15623 QVIEKFEAL True PC9_epitope_Rep4 1075.5913609438699 1075.59026993586 68.018 2 0.10722076291904571 0.0022306423027562182 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 77128 17637 NYATGQWTRF True PC9_epitope_Rep3 1242.57817049122 1242.5770699358602 73.032 2 0.10721631281716207 0.0022306423027562182 0.9438714419765777 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 30122 12102 FYQEHPDL True PC9_epitope_Rep3 1047.4661604307498 1047.4650699358601 51.591 2 0.10720948722542753 0.0022306423027562182 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 107945 21351 TAYDNFVEL True PC9_epitope_Rep1 1070.49204082542 1070.49147496793 86.957 1 0.10719526482462995 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 38618 9237 HHIVSIEV True PC9_epitope_Rep6 932.50796567308 932.50686993586 45.68 2 0.10718428965551063 0.0022306423027562182 0.9438714419765777 ['ENSG00000183011|ENST00000575771|NAA38', 'nc|ENSG00000183011|Q9BRA0-2|NAA38'] 86166 2609 QPSQPVTSA True PC9_epitope_Rep2 913.4505103666099 913.4499649679301 14.696 1 0.10717897572639161 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 2332 2816 AEQDPDELNKA True H1975_Epitope_Rep2 1228.55716026312 1228.55606993586 14.901 2 0.10717348314400825 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3', 'ENSG00000146707|ENST00000310842|POMZP3'] 72152 12245 MRIAAGESL True PC9_epitope_Rep1 946.49060135678 946.48950993586 51.959 2 0.10717027578185048 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1'] 88073 16545 QVVGGIYGV True PC9_epitope_Rep6 890.4861675993399 890.48561496793 76.08 1 0.10716788969107884 0.0022306423027562182 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 120158 11813 VFLENVIR True H1975_Epitope_Rep3 988.5705659296399 988.56946993586 50.586 2 0.10716503632272799 0.0022306423027562182 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 105461 6602 SVASISLTK True NCI_RA007_Epitope_Rep3 904.52294703088 904.52184993586 33.029 2 0.10714950613452974 0.0022306423027562182 0.9438714419765777 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 138385 11116 YRDNDSDLAL True PC9_epitope_Rep4 1180.53603089572 1180.5349299358602 50.535 2 0.10714722024027372 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-3|PLEKHB2', 'ENSG00000115762|ENST00000693505|PLEKHB2', 'nc|ENSG00000115762|Q96CS7-6|PLEKHB2'] 9653 20918 AYGLVSATF True PC9_epitope_Rep1 927.47018318203 927.46963496793 85.282 1 0.10713068023124964 0.0022306423027562182 0.9438714419765777 ['ENSG00000156875|ENST00000370152|MFSD14A'] 9530 20914 AYAENIALL True PC9_epitope_Rep3 976.5229470308799 976.52184993586 85.723 2 0.1071283446294588 0.0022306423027562182 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 103412 19889 SQYGEIVNI True PC9_epitope_Rep1 1021.5080252427299 1021.5074749679301 81.321 1 0.10712193569526826 0.0022306423027562182 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 16496 9288 EENFAVEA True H1975_Epitope_Rep1 907.3923267841499 907.39122993586 40.639 2 0.10711822159016068 0.0022306423027562182 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 128351 12998 VSDPLIGGTY True H1975_Epitope_Rep1 1020.5127762699999 1020.51227496793 55.078 1 0.10710685555341423 0.0022306423027562182 0.9438714419765777 ['ENSG00000169359|ENST00000643144|SLC33A1'] 21283 16335 ERIPDVAAL True PC9_epitope_Rep2 982.5447451046199 982.54364993586 68.079 2 0.10709854074645571 0.0022306423027562182 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 128472 9891 VSEVSSLNY True H1975_Epitope_Rep2 996.4763907612801 996.47528993586 43.034 2 0.10709764846011005 0.0022306423027562182 0.9438714419765777 ['ENSG00000117000|ENST00000372771|RLF'] 23946 12265 EYNSDLHQF True PC9_epitope_Rep3 1151.4883524273098 1151.48724993586 52.205 2 0.1070899526719253 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 31863 4902 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep2 977.4124109861698 977.41130993586 23.939 2 0.10707732532687622 0.0022306423027562182 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 9006 15755 AVIDVGINRV True PC9_epitope_Rep2 1054.61349337078 1054.6123899358602 65.87 2 0.1070664824504256 0.0022609917809893365 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 4094 10235 AHSPLAAQL True PC9_epitope_Rep2 906.4923156089401 906.49120993586 44.704 2 0.10706425694170822 0.0022609917809893365 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 70816 11124 MEENFAVEAA True H1975_Epitope_Rep2 1109.46992548185 1109.4688299358602 47.823 2 0.10705766458829187 0.0022609917809893365 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 27660 8861 FQDDPHAGL True PC9_epitope_Rep4 998.4457593393398 998.44466993586 41.616 2 0.10704699208886356 0.0022849830911251257 0.9438714419765777 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 113194 9561 TQDPTAQSL True PC9_epitope_Rep1 959.45598966987 959.45488993586 41.634 2 0.10703982357902542 0.0022849830911251257 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 68120 6145 LTPETLTR True NCI_RA007_Epitope_Rep5 929.51819600361 929.51708993586 30.317 2 0.10703633712992389 0.0022849830911251257 0.9438714419765777 ['CON__REFSEQ:XP_001252647', 'CON__Q9TTE1', 'CON__A2I7N3', 'CON__A2I7N1'] 94782 16731 RYLPTGSFPFL True NCI_RA007_Epitope_Rep4 1296.6866583110398 1296.68556993586 72.539 2 0.10703572759311328 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 35560 15770 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.5172549679301 65.818 1 0.10703509438294456 0.0022849830911251257 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 17205 15585 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50652993586 65.095 2 0.10703504442720488 0.0022849830911251257 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 34964 15087 GQWYGPNTV True PC9_epitope_Rep6 1020.4664947839199 1020.46538993586 70.089 2 0.10703361910488625 0.0022849830911251257 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 137587 21198 YLSTMVGLIL True PC9_epitope_Rep5 1108.620218544 1108.6191299358602 86.585 2 0.1070314448795013 0.0022849830911251257 0.9438714419765777 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000521046.1_1_8:52773369-52773723:-|nuORF'] 124642 19919 VLIENVASL True PC9_epitope_Rep4 956.5542471591599 956.55314993586 84.753 2 0.10702907519446146 0.0022849830911251257 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 24564 19872 FALPGLLHA True PC9_epitope_Rep4 937.5385375253701 937.53798496793 84.57 1 0.10702733318093814 0.0022849830911251257 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 113653 7857 TRDEDHIAL True PC9_epitope_Rep5 1068.51998690876 1068.5188899358602 35.165 2 0.10702708916868488 0.0022849830911251257 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 86830 13967 QRPPTIVL True PC9_epitope_Rep5 922.5600012459399 922.55890993586 58.747 2 0.10702448863720794 0.0022849830911251257 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 117150 12003 TYSPALNKM[Oxidation]F True PC9_epitope_Rep4 1186.5692459807399 1186.5681499358602 53.965 2 0.10701268770933964 0.0022849830911251257 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 102525 16950 SQADVIPAV True PC9_epitope_Rep5 898.4759968384599 898.47488993586 70.216 2 0.10700356002651325 0.0022849830911251257 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 119834 6267 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51731496793 29.175 1 0.10700272433593441 0.0022849830911251257 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 74227 13929 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 58.726 2 0.10699997692571821 0.0022849830911251257 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 11879 18185 DHNYQSYIL True PC9_epitope_Rep1 1151.52473793603 1151.52364993586 74.739 2 0.10699105004463297 0.0022849830911251257 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 19363 7400 ELNITAAK True PC9_epitope_Rep5 858.4810822188999 858.47998993586 33.421 2 0.10698590680915615 0.0022849830911251257 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 65302 5263 LSEKPPYSKY True H1975_Epitope_Rep3 1210.6233893481399 1210.6222899358602 25.326 2 0.10697940350980102 0.0022849830911251257 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 41215 8994 IADPNIAKL True H1975_Epitope_Rep1 953.55458151233 953.55348993586 39.501 2 0.10697805065142695 0.0022849830911251257 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 98825 12454 SITSELHAV True PC9_epitope_Rep4 955.4974605590301 955.49636993586 55.712 2 0.10697602210631395 0.0022849830911251257 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 86067 7075 QPLYQPSHA True PC9_epitope_Rep5 1039.5086939490698 1039.50758993586 32.181 2 0.10697541000912184 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 75710 17109 NQVLNLIKA True PC9_epitope_Rep3 1011.6076797143498 1011.60658993586 70.962 2 0.1069739192385262 0.0022849830911251257 0.9438714419765777 ['ENSG00000117748|ENST00000373912|RPA2', 'nc|ENSG00000117748|P15927-2|RPA2', 'nc|ENSG00000117748|P15927-3|RPA2'] 21148 9165 ERDSTEVEI True PC9_epitope_Rep5 1076.49858275784 1076.4974899358601 40.2 2 0.10697335900110946 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'nc|ENSG00000116641|Q96N67-7|DOCK7'] 1900 13471 AEILELAGNAA True H1975_Epitope_Rep3 1070.5607890915799 1070.56027496793 57.09 1 0.1069699556188021 0.0022849830911251257 0.9438714419765777 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 72203 14093 MRSPISAQL True PC9_epitope_Rep5 1001.5328005219299 1001.53170993586 59.22 2 0.10696767504138208 0.0022849830911251257 0.9438714419765777 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000367203.8_1_1:204082043-204086879:+|nuORF'] 31139 8632 GDAGAEYVVE True H1975_Epitope_Rep1 1008.4400052525599 1008.4394749679301 38.131 1 0.10696496135904865 0.0022849830911251257 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6645960-6646242:+|nuORF', 'ENST00000425487.2_1_X:46299833-46299950:-|nuORF', 'ENST00000507324.1_1_15:64821358-64821781:-|nuORF'] 21244 9730 ERHPQTIVL True PC9_epitope_Rep3 1091.60874234351 1091.60764993586 42.38 2 0.10696372078159015 0.0022849830911251257 0.9438714419765777 ['ENST00000481107.1_1_17:15928260-15930833:+|nuORF', 'ENST00000475723.5_1_17:15903657-15930833:+|nuORF', 'ENSG00000011295|ENST00000261647|TTC19'] 1012 6353 AEAEPPSEV True H1975_Epitope_Rep3 927.41854153199 927.41744993586 29.428 2 0.1069612726492459 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 61404 18416 LLEPFVHQV True PC9_epitope_Rep2 1080.59678067748 1080.59568993586 76.168 2 0.10696008344754157 0.0022849830911251257 0.9438714419765777 ['ENSG00000068745|ENST00000328631|IP6K2', 'nc|ENSG00000068745|Q9UHH9-3|IP6K2', 'nc|ENSG00000068745|Q9UHH9-6|IP6K2', 'nc|ENSG00000068745|Q9UHH9-2|IP6K2', 'nc|ENSG00000068745|Q9UHH9-4|IP6K2', 'nc|ENSG00000068745|Q9UHH9-5|IP6K2'] 70145 10461 LYLDEAHSI True NCI_RA007_Epitope_Rep4 1059.52367530687 1059.52256993586 47.087 2 0.10695884088761685 0.0022849830911251257 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'SPTLC2|p.A351S|1|0.2|ENSG00000100596|chr14:77555425-77555425|C/A|missense_variant'] 73799 10335 NHDTALTL True PC9_epitope_Rep5 883.43994568291 883.43884993586 44.737 2 0.1069587926607536 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 41748 14879 IDPFSLDALSK True H1975_Epitope_Rep1 1204.6339540318397 1204.6328499358601 62.466 2 0.10695618525583898 0.0022849830911251257 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000482776.1_1_7:56124009-56126486:+|nuORF'] 42281 15917 IEIPSVVSV True H1975_Epitope_Rep2 941.54334812229 941.54224993586 66.426 2 0.10695326583480126 0.0022849830911251257 0.9438714419765777 ['ZBTB20|p.T272Rfs*23|1|0.1|ENSG00000181722|chr3:114351265-114351266|-/TCGT|frameshift_variant', 'nc|ENSG00000181722|Q9HC78-2|ZBTB20', 'ZBTB20|p.A693Cfs*33|1|0.16|ENSG00000181722|chr3:114339155-114339156|-/G|frameshift_variant', 'ZBTB20|p.P692Lfs*43|1|0.38|ENSG00000181722|chr3:114339156-114339156|G/-|frameshift_variant', 'ENSG00000181722|ENST00000675478|ZBTB20'] 1684 10008 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 43.485 1 0.10695308440619958 0.0022849830911251257 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 113839 11288 TREEGTPLTL True PC9_epitope_Rep4 1115.5822528121498 1115.5811499358601 51.197 2 0.10695263339704236 0.0022849830911251257 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 31317 11915 GEAEAFAIGA True H1975_Epitope_Rep2 934.4396113297398 934.4390649679301 50.91 1 0.10695149910687013 0.0022849830911251257 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 24677 8819 FATHAAALSVR True PC9_epitope_Rep3 1142.6196413803798 1142.61799490379 38.871 3 0.10694995746854478 0.0022849830911251257 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 117145 12632 TYSPALNKM[Oxidation]F True PC9_epitope_Rep2 1186.5692459807399 1186.5681499358602 53.899 2 0.10694234716439846 0.0022849830911251257 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 8835 16174 AVFPSIVGR True PC9_epitope_Rep2 944.5443511817999 944.54324993586 67.467 2 0.10693206513891305 0.0022849830911251257 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 36474 16241 GVISKTFQL True PC9_epitope_Rep4 991.57023157647 991.56912993586 70.414 2 0.1069295790998997 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 37758 7153 HAVGPSTSL True PC9_epitope_Rep3 867.4450310633501 867.44392993586 32.526 2 0.10692208826127177 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 52678 6430 KQFQSPSTL True NCI_RA007_Epitope_Rep5 1034.5396597241797 1034.53856993586 31.401 2 0.1069184608686693 0.0022849830911251257 0.9438714419765777 ['ENSG00000177311|ENST00000321464|ZBTB38'] 35549 14545 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.51670993586 61.22 2 0.1069156089064355 0.0022849830911251257 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 107511 8971 TAAPSPLRL True H1975_Epitope_Rep3 924.53926580136 924.53816993586 39.502 2 0.10691145945288529 0.0022849830911251257 0.9438714419765777 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 76203 13320 NRVSGGLEVL True PC9_epitope_Rep2 1042.5771078620598 1042.5760099358602 56.509 2 0.10690837665602436 0.0022849830911251257 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000495420.5_1_15:69079601-69113141:-|nuORF'] 33775 11839 GLSQSALPYR True PC9_epitope_Rep3 1090.5771078620598 1090.5760099358602 50.558 2 0.1069074125834221 0.0022849830911251257 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 39396 14765 HLVPEVPTV True PC9_epitope_Rep6 989.55458151233 989.55348993586 68.746 2 0.10690729672126865 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 9490 5515 AWAPKPYHKF True NCI_RA007_Epitope_Rep3 1243.6502132326698 1243.64857490379 28.694 3 0.10689840876684402 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 135627 8162 YEEQPGLQP True H1975_Epitope_Rep1 1059.4872897981497 1059.48618993586 36.336 2 0.10689325723119139 0.0022849830911251257 0.9438714419765777 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 83735 5747 QEAVTRLEA True H1975_Epitope_Rep2 1015.5298233164699 1015.52872993586 27.103 2 0.10689214352014483 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 20837 13400 EQPYKWEKF True PC9_epitope_Rep5 1253.6080736371698 1253.60641490379 56.56 3 0.1068851083281043 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000213096|O75437-2|ZNF254', 'ENSG00000213096|ENST00000357002|ZNF254'] 137407 20474 YLLPAIVHI True PC9_epitope_Rep4 1037.62735252977 1037.6262499358602 86.9 2 0.10688401882201541 0.0022849830911251257 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 38565 18562 HHFEWIQKL True PC9_epitope_Rep5 1236.64037682496 1236.63874490379 76.424 3 0.10688340238812195 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 8231 18746 ATIGELAQV True PC9_epitope_Rep5 900.4916469025999 900.49109496793 77.118 1 0.10686987738960467 0.0022849830911251257 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 123357 19229 VIAEILRGV True PC9_epitope_Rep2 968.6018660579199 968.60076993586 79.338 2 0.106869623784843 0.0022849830911251257 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56'] 91585 12730 RPAQPTLWTA True PC9_epitope_Rep4 1139.60874234351 1139.60764993586 56.82 2 0.10686659847973633 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 86819 13782 QRPPTIVL True PC9_epitope_Rep1 922.5600012459399 922.55890993586 57.859 2 0.10686623038651376 0.0022849830911251257 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 1226 15002 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.44834993586 62.856 2 0.10686603005119007 0.0022849830911251257 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 9151 20370 AVMPTLIQA True PC9_epitope_Rep5 942.5208388558998 942.51974993586 83.388 2 0.10686173639512575 0.0022849830911251257 0.9438714419765777 ['ENSG00000150403|ENST00000434316|TMCO3', 'nc|ENSG00000150403|Q6UWJ1-2|TMCO3'] 72660 20764 MWSPTHPALF True PC9_epitope_Rep3 1185.5641006502099 1185.56300993586 85.138 2 0.10685478103822874 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 72061 19438 MRASSFLIV True PC9_epitope_Rep2 1022.5582869937799 1022.55718993586 80.147 2 0.10684878224246891 0.0022849830911251257 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 2441 3763 AEQM[Oxidation]ASVQNA True H1975_Epitope_Rep2 1063.46042380775 1063.45932993586 19.479 2 0.10684831055474159 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 79198 8036 PGFAPLTSR True NCI_RA007_Epitope_Rep3 944.50796567308 944.50686993586 38.7 2 0.1068440007155345 0.0022849830911251257 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'ENST00000450755.1_1_X:122696050-122696458:+|nuORF', 'TUBB6|p.S278R|1|0.08|ENSG00000176014|chr18:12325623-12325623|C/G|missense_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 94929 7960 RYPDSHQLF True NCI_RA007_Epitope_Rep5 1161.55670677065 1161.5550749037902 37.305 3 0.10682474865859319 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 101266 23037 SLWQEIPVV True PC9_epitope_Rep1 1069.58079626017 1069.5796899358602 93.411 2 0.10680949086215599 0.0022849830911251257 0.9438714419765777 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'nc|ENSG00000050327|Q12774-2|ARHGEF5'] 21826 11590 ESDSTIVYY True H1975_Epitope_Rep2 1075.47097102767 1075.47037496793 49.645 1 0.10680897587815028 0.0022849830911251257 0.9438714419765777 ['ENST00000423257.1_1_17:17360441-17360570:+|nuORF', 'ENST00000485209.5_1_1:184027321-184041978:+|nuORF', 'ENSG00000198860|ENST00000645668|TSEN15'] 59882 7910 LHHDDPEVL True PC9_epitope_Rep3 1073.51417325233 1073.5130699358601 35.407 2 0.10680793721189942 0.0022849830911251257 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 47370 16089 IYIAGHPAF True PC9_epitope_Rep3 987.51780208079 987.51670993586 67.035 2 0.10680738806696453 0.0022849830911251257 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 49404 17788 KILEDVVGV True PC9_epitope_Rep5 970.5698972232999 970.56880993586 73.439 2 0.10680009980141869 0.0022849830911251257 0.9438714419765777 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 7878 7216 ATAPPAPAY True NCI_RA007_Epitope_Rep4 857.42831837005 857.4277649679301 34.389 1 0.10678108667744544 0.0022849830911251257 0.9438714419765777 ['ENSG00000135837|ENST00000367607|CEP350'] 110114 9651 TIAPALVSK True PC9_epitope_Rep5 898.5487678559 898.54766993586 42.089 2 0.10677715374197572 0.0022849830911251257 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 113736 14839 TRDGNVFLV True PC9_epitope_Rep4 1019.5399940773499 1019.53888993586 65.017 2 0.10677143992775302 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 104994 8881 STIEYVIQR True NCI_RA007_Epitope_Rep5 1107.59242357303 1107.59187496793 40.824 1 0.10676082336055562 0.0022849830911251257 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 139487 15596 YTGTPDWLY True H1975_Epitope_Rep1 1114.4971262058598 1114.49657496793 65.275 1 0.106759018815949 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 125962 10180 VPAGGAVAV True PC9_epitope_Rep3 739.42283906679 739.42229496793 44.109 1 0.1067508774444519 0.0022849830911251257 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 113893 11760 TRHPFLTAL True PC9_epitope_Rep6 1054.59236400338 1054.59126993586 56.396 2 0.1067274743461886 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 26753 21069 FLDGNEMTL True PC9_epitope_Rep5 1038.46919720586 1038.46867496793 86.102 1 0.10671640509877774 0.0022849830911251257 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 132492 12662 VYPEKLATKF True PC9_epitope_Rep3 1194.6648602372995 1194.66322490379 53.729 3 0.1067124657997712 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 27736 20991 FQDQQILTL True PC9_epitope_Rep2 1104.58152453616 1104.58097496793 86.193 1 0.10669434492495883 0.0022849830911251257 0.9438714419765777 ['ENST00000524634.5_1_2:228190068-228197215:+|nuORF'] 5238 7317 ALQEM[Oxidation]VHQV True PC9_epitope_Rep5 1069.52263014149 1069.5215299358601 33.106 2 0.10669190768064707 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 90141 7821 RGYGATVSL True NCI_RA007_Epitope_Rep5 922.4872302284999 922.48612993586 36.784 2 0.10668556776373513 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000099998|P36269-2|GGT5', 'ENSG00000099998|ENST00000327365|GGT5', 'nc|ENSG00000099998|P36269-3|GGT5'] 4090 12483 AHSPASLSF True PC9_epitope_Rep5 915.44503106335 915.44392993586 53.015 2 0.1066791570188216 0.0022849830911251257 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 95819 11119 SDGVAVLKV True PC9_epitope_Rep2 886.5123823471799 886.5118349679301 48.094 1 0.10667766301113017 0.0022849830911251257 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 102834 20778 SQFQQEFPSL True PC9_epitope_Rep2 1209.5666027480097 1209.56550993586 85.364 2 0.10667411488624415 0.0022849830911251257 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 27278 22022 FLYPFPLAL True H1975_Epitope_Rep3 1079.60555445603 1079.60497496793 92.085 1 0.10666985375364216 0.0022849830911251257 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 38506 4684 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 24.552 2 0.1066669231256969 0.0022849830911251257 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 103295 17545 SQTSATFQL True PC9_epitope_Rep1 981.4767251144499 981.47562993586 72.28 2 0.10666596792472054 0.0022849830911251257 0.9438714419765777 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 77613 15279 NYVEKGFQI True PC9_epitope_Rep2 1096.5553097883198 1096.5542099358602 64.047 2 0.10665995563294908 0.0022849830911251257 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 135520 7494 YEEAVKTLP True H1975_Epitope_Rep1 1048.54407639828 1048.5429699358601 33.822 2 0.10665863127475884 0.0022849830911251257 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 97597 16144 SHADVVNLL True PC9_epitope_Rep2 966.51344497634 966.51234993586 67.354 2 0.106655886887414 0.0022849830911251257 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 34509 7120 GQDVGRYQV True PC9_epitope_Rep4 1020.49885754136 1020.49776993586 34.66 2 0.10665479889748933 0.0022849830911251257 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 43903 20736 ILDPHVVLL True PC9_epitope_Rep1 1017.6222671493299 1017.6211699358599 84.588 2 0.10665032693342229 0.0022849830911251257 0.9438714419765777 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 48720 6842 KENEGFTVTA True H1975_Epitope_Rep2 1094.52440358286 1094.5233099358602 31.234 2 0.10664708520492427 0.0022849830911251257 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3'] 132807 14108 VYSRTFTWL True NCI_RA007_Epitope_Rep5 1171.6025943339098 1171.6014899358602 60.957 2 0.10663565870900736 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 137558 16082 YLSEEVQAV True PC9_epitope_Rep1 1036.5076908895599 1036.5065899358601 66.674 2 0.10663523583178351 0.002310030395136778 0.9438714419765777 ['ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000496047.5_1_2:85872080-85873002:+|nuORF'] 6952 14596 AQLTSTPAI True PC9_epitope_Rep1 900.4916469026 900.49054993586 60.967 2 0.10662581851053263 0.002310030395136778 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A'] 77629 20483 NYVQAVEEF True PC9_epitope_Rep1 1097.5029398622898 1097.50184993586 83.6 2 0.10662218547897455 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 97816 14056 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 59.157 2 0.10660193425041685 0.002310030395136778 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 35028 13391 GRAPQVLVL True PC9_epitope_Rep6 951.5865503469499 951.58544993586 63.179 2 0.10659211028851044 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 21765 11095 ESDEVELSY True H1975_Epitope_Rep1 1069.44515020265 1069.4440499358602 47.642 2 0.10658733684918344 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 95649 12084 SAVPPGTSL True PC9_epitope_Rep3 827.43888305375 827.43778993586 51.524 2 0.10658085383306 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 18056 11569 EIIRQLNGV True PC9_epitope_Rep6 1040.59784330664 1040.59674993586 55.609 2 0.10657142630750407 0.002310030395136778 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 48607 5180 KEIESIVKA True H1975_Epitope_Rep2 1015.5913609438699 1015.59026993586 24.997 2 0.10655221711006953 0.002310030395136778 0.9438714419765777 ['ENSG00000100209|ENST00000216027|HSCB'] 3890 8050 AHDDGRWSL True PC9_epitope_Rep6 1055.47845644995 1055.47734993586 40.453 2 0.10655214537664591 0.002310030395136778 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 31714 9571 GEIQEKLLSA True NCI_RA007_Epitope_Rep4 1086.5920892198599 1086.59098993586 43.66 2 0.10654828508755418 0.002310030395136778 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 23657 20847 EYGNIIVTL True PC9_epitope_Rep4 1020.54916177872 1020.54806993586 88.341 2 0.1065442296114809 0.002310030395136778 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 38138 7193 HEQLRAVIV True H1975_Epitope_Rep2 1063.61382772395 1063.6127299358602 32.602 2 0.10654387858075923 0.002310030395136778 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 53815 15199 KYFLWVVKF True NCI_RA007_Epitope_Rep3 1228.7008518231999 1228.6997499358602 67.306 2 0.10654102666858371 0.002310030395136778 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 132530 18893 VYPGDPLRF True PC9_epitope_Rep2 1062.5498304850598 1062.5487299358601 78.036 2 0.10653954162289245 0.002310030395136778 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 9088 16065 AVLDLVHSA True PC9_epitope_Rep1 923.50763131991 923.50652993586 66.61 2 0.10653901418597557 0.002310030395136778 0.9438714419765777 ['ENST00000598755.1_1_19:52104581-52104959:+|nuORF', 'ENSG00000142544|ENST00000421832|CTU1'] 47430 12682 IYIKQIKTF True PC9_epitope_Rep2 1152.6906810623198 1152.6890249037901 54.089 3 0.10653876822046872 0.002310030395136778 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 118703 3942 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 20.292 2 0.10653795247561404 0.002310030395136778 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 47462 20648 IYIWDLNNF True NCI_RA007_Epitope_Rep5 1196.5866099165999 1196.58550993586 86.378 2 0.1065379374529398 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 96327 9795 SEEWADNHLP True H1975_Epitope_Rep3 1196.50981614788 1196.50870993586 42.7 2 0.10653705892063357 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3', 'nc|ENSG00000105355|O60664-2|PLIN3'] 74884 7665 NLQTVNVDEN True NCI_RA007_Epitope_Rep5 1144.53603089572 1144.5349299358602 36.186 2 0.10651868308678862 0.002310030395136778 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 40337 7849 HRSGIESAL True PC9_epitope_Rep1 968.5039429218 968.50284993586 35.017 2 0.10649308933568803 0.002310030395136778 0.9438714419765777 ['ENSG00000114446|ENST00000264538|IFT57'] 103543 17638 SRDDNMFQI True PC9_epitope_Rep5 1124.49205790876 1124.4909699358602 72.856 2 0.10648790832404806 0.002310030395136778 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 32108 6222 GEYGRTVVP True NCI_RA007_Epitope_Rep3 976.4977949121999 976.49668993586 31.479 2 0.10648733011482202 0.002310030395136778 0.9438714419765777 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant'] 76946 21074 NVPEGLLATV True PC9_epitope_Rep1 1011.56006081559 1011.55896993586 85.894 2 0.10648029558425813 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 48661 3213 KELEKTYSA True H1975_Epitope_Rep2 1067.54989005471 1067.5487899358602 16.915 2 0.10647380406252759 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 39485 7505 HPADSVVSV True PC9_epitope_Rep2 909.4555957470501 909.45448993586 34.237 2 0.10647136427686166 0.002310030395136778 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 116734 21335 TYLDNGVVF True PC9_epitope_Rep1 1026.5022115862998 1026.5016749679298 86.895 1 0.10645469752743951 0.002310030395136778 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 90663 9447 RKLENIVEL True NCI_RA007_Epitope_Rep4 1112.65535818276 1112.6542699358602 43.196 2 0.10645335922759801 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 109612 16976 THDGGFLSL True PC9_epitope_Rep4 945.45559574705 945.45448993586 73.288 2 0.10645225872817199 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 5943 7020 APIIAVTR True H1975_Epitope_Rep3 839.5228874612301 839.5217899358599 31.965 2 0.10643115915534897 0.002310030395136778 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 96299 7953 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 35.539 1 0.10642688456785927 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 21467 10831 ERQDLTTAL True PC9_epitope_Rep2 1045.54038800017 1045.53928993586 46.979 2 0.10642601356621742 0.002310030395136778 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ARHGEF2|p.P672Qfs*7|2|0.14|ENSG00000116584|chr1:155952207-155952207|C/-|frameshift_variant', 'ENST00000474428.6_1_1:155922555-155932010:-|nuORF'] 82505 9632 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 42.029 1 0.10642418476732951 0.002310030395136778 0.9438714419765777 ['ENSG00000168143|ENST00000306858|FAM83B', 'FAM83B|p.M1000Ifs*12|1|0.2|ENSG00000168143|chr6:54941969-54941970|-/T|frameshift_variant', 'FAM83B|p.K141Rfs*2|1|0.3|ENSG00000168143|chr6:54870665-54870665|G/-|frameshift_variant'] 25591 10722 FESVSHLI True H1975_Epitope_Rep1 930.4810822188999 930.47998993586 46.204 2 0.10640341631313133 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1'] 86168 5087 QPSQPVTSA True PC9_epitope_Rep3 913.4505103666099 913.44940993586 24.652 2 0.10640090587882568 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 72902 20688 NAVVELVTV True PC9_epitope_Rep5 942.5385970950199 942.53750993586 84.632 2 0.10639677304360255 0.002310030395136778 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 94932 10688 RYPDSHQLF True PC9_epitope_Rep2 1161.55670677065 1161.5550749037902 46.424 3 0.1063945480893944 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 4434 17835 AIVKEIVNI True PC9_epitope_Rep5 997.6171817688898 997.61608993586 73.621 2 0.10638159605537618 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 84844 12126 QHNDLEFKL True PC9_epitope_Rep6 1142.57202248162 1142.57038490379 57.986 3 0.10636899286023743 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 77439 7851 NYNNQSSNF True PC9_epitope_Rep2 1086.4366512076201 1086.43554993586 35.568 2 0.10636657861036419 0.002310030395136778 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 68977 14990 LVGIDIFTGK True NCI_RA007_Epitope_Rep2 1061.61209638845 1061.61098993586 62.99 2 0.10636246588200853 0.002310030395136778 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 70494 19179 LYSSEQLLI True PC9_epitope_Rep6 1064.57537652656 1064.57426993586 86.425 2 0.10636069929105267 0.002310030395136778 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 23824 12400 EYLLKVNEI True NCI_RA007_Epitope_Rep4 1119.61757569171 1119.61646993586 54.693 2 0.10635832471044615 0.002310030395136778 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 128411 15434 VSDYYSQLIY True H1975_Epitope_Rep2 1249.58666948625 1249.5855699358601 64.524 2 0.10635169318082714 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C'] 104876 7841 STESSVAVY True H1975_Epitope_Rep3 941.43419159613 941.43308993586 35.137 2 0.1063451962141824 0.002310030395136778 0.9438714419765777 ['ENSG00000134440|ENST00000256854|NARS1', 'ENST00000411676.6_1_18:55274615-55283204:-|nuORF'] 131831 12904 VYAQVARLF True NCI_RA007_Epitope_Rep4 1065.5971150306498 1065.5960099358601 56.724 2 0.10634482472891252 0.002310030395136778 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 103153 20662 SQNDGFFAV True PC9_epitope_Rep3 983.4348603024699 983.43431496793 84.75 1 0.10634202298405752 0.002310030395136778 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 71331 21813 MHHWLLFEM True PC9_epitope_Rep5 1242.5678061316598 1242.5661449037902 88.936 3 0.10633754781309285 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74'] 60473 15703 LILSPTREL True PC9_epitope_Rep2 1040.62299542532 1040.62188993586 65.677 2 0.10633401400453854 0.002310030395136778 0.9438714419765777 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENSG00000088205|ENST00000263239|DDX18'] 53970 13901 KYKGIFNGF True PC9_epitope_Rep4 1072.5705659296398 1072.56946993586 61.372 2 0.1063130047904236 0.002310030395136778 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547908.1_1_12:98989476-98991822:+|nuORF'] 10017 12095 AYTPFHAVL True NCI_RA007_Epitope_Rep5 1017.5283667644899 1017.52726993586 53.18 2 0.1063119403712478 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 14530 16350 DVANKIGII True PC9_epitope_Rep2 941.5545815123298 941.55348993586 68.135 2 0.10631037925219643 0.002310030395136778 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000471152.1_2_3:161146917-161147007:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 95595 7385 SATDNVCHL True H1975_Epitope_Rep2 958.4178303393401 958.41672993586 33.346 2 0.10630810692295856 0.002310030395136778 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 64614 15891 LREPLPATL True PC9_epitope_Rep1 1008.59678067748 1008.59568993586 65.935 2 0.10629398125657827 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 99559 23550 SLFEEMLQV True PC9_epitope_Rep1 1094.53179746242 1094.5307099358602 95.376 2 0.10629386800693187 0.002310030395136778 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 63642 19282 LPNLQTVTV True PC9_epitope_Rep4 983.56514619603 983.56404993586 82.273 2 0.10628843575857254 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 42456 6902 IEQPNVASA True H1975_Epitope_Rep3 927.4661604307499 927.46561496793 31.509 1 0.10628794067787074 0.002310030395136778 0.9438714419765777 ['ENSG00000197070|ENST00000371421|ARRDC1'] 47854 17158 IYTFPHSAF True PC9_epitope_Rep6 1081.5232813840498 1081.52218993586 78.583 2 0.10628418204935419 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 7616 7681 ASITALEAK True PC9_epitope_Rep4 902.50729696674 902.50618993586 36.925 2 0.106280964785997 0.002310030395136778 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 96544 11959 SELPGAFEA True H1975_Epitope_Rep3 919.4287122928699 919.42760993586 51.157 2 0.10627874500822017 0.002310030395136778 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 96179 11525 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.4594649679301 49.316 1 0.10627714021067823 0.002310030395136778 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 97896 12383 SHLVATVTV True PC9_epitope_Rep1 925.52328138405 925.52218993586 52.49 2 0.10627138823819327 0.002310030395136778 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 11764 15576 DHIHIIAL True PC9_epitope_Rep2 930.52870111766 930.52815496793 65.188 1 0.1062681056001728 0.002310030395136778 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 56938 9901 LEDSPVISA True H1975_Epitope_Rep2 929.47057710485 929.47002496793 43.073 1 0.1062677292161608 0.002310030395136778 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 24683 6571 FATHAAALSVR True PC9_epitope_Rep6 1142.6196413803798 1142.61799490379 33.977 3 0.10626523078352249 0.002310030395136778 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 9641 12096 AYGHFSYEF True NCI_RA007_Epitope_Rep5 1119.46616043075 1119.4650699358601 53.184 2 0.10626367182036683 0.002310030395136778 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 84099 6892 QEQGDAPAI True H1975_Epitope_Rep3 927.4297749220298 927.42866993586 31.469 2 0.10625959691193045 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32918272-32920828:-|nuORF', 'ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 43876 16719 ILDEVIMGY True H1975_Epitope_Rep2 1051.5259838059899 1051.52488993586 69.546 2 0.10625655099881791 0.002310030395136778 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 17737 19791 EHSTVITFL True PC9_epitope_Rep5 1045.54441075145 1045.5433099358602 81.171 2 0.10625282400108081 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 104044 11604 SRTATITVL True PC9_epitope_Rep2 960.5603951687599 960.55928993586 49.96 2 0.10625193520489722 0.002310030395136778 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 49327 10036 KIDEHHFVAV True PC9_epitope_Rep3 1193.6193070272102 1193.61766490379 43.56 3 0.10624955868774527 0.002310030395136778 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 1918 4855 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 23.762 2 0.1062477246043681 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 87527 11461 QTHSVFVNV True PC9_epitope_Rep4 1029.5243440132099 1029.5232499358601 51.848 2 0.10624567732775198 0.002310030395136778 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 62191 15069 LLPNHSYVF True PC9_epitope_Rep6 1088.5654805492 1088.5643899358602 70.016 2 0.10624114229644624 0.002310030395136778 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 127232 21005 VQIGDIVTV True PC9_epitope_Rep5 942.5385970950199 942.53750993586 85.855 2 0.10622992129351796 0.002310030395136778 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 7435 9263 ASDDFDQASY True H1975_Epitope_Rep3 1117.4199980839699 1117.41947496793 40.622 1 0.10622753831679493 0.0023336869222609488 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 127234 19011 VQIGDIVTV True PC9_epitope_Rep6 942.5385970950199 942.53750993586 85.769 2 0.10622458065690564 0.0023336869222609488 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 132243 17568 VYKTIMEQF True PC9_epitope_Rep2 1157.57908200801 1157.5779899358602 72.851 2 0.10622337187909568 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 35768 21072 GTVEQIVYL True PC9_epitope_Rep5 1020.5491617787197 1020.54806993586 86.114 2 0.10622109010176875 0.0023336869222609488 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 72514 17855 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep4 989.5467196310099 989.54562993586 77.306 2 0.10621168248173732 0.0023336869222609488 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 84119 17812 QEQLLAILP True H1975_Epitope_Rep3 1023.5964463243098 1023.5953499358601 74.521 2 0.10621130093363453 0.0023336869222609488 0.9438714419765777 ['ENSG00000171222|ENST00000305978|SCAND1'] 75376 9772 NQDKETLTL True PC9_epitope_Rep2 1060.540053647 1060.53894993586 42.927 2 0.10620493672597192 0.0023336869222609488 0.9438714419765777 ['ENSG00000165506|ENST00000298292|DNAAF2', 'nc|ENSG00000165506|Q9NVR5-2|DNAAF2'] 22794 9510 EVDPDTILK True H1975_Epitope_Rep3 1028.5389910178399 1028.5378899358602 41.586 2 0.10620276126874538 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000100227|Q9BY77-2|POLDIP3', 'ENSG00000100227|ENST00000252115|POLDIP3'] 69041 18100 LVIDAVREI True PC9_epitope_Rep4 1026.6073453611798 1026.6062499358602 77.688 2 0.1061779216572891 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 6281 5600 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 26.367 2 0.10617344163480186 0.0023336869222609488 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 34626 19349 GQIEVVPEV True PC9_epitope_Rep5 968.5178616504398 968.51676993586 79.472 2 0.10617318170694119 0.0023336869222609488 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 63257 18229 LPALAGVSA True PC9_epitope_Rep3 797.46470387877 797.4641549679301 75.331 1 0.1061660970976825 0.0023336869222609488 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 112603 4971 TPASPPRVSA True PC9_epitope_Rep4 981.52434401321 981.52324993586 25.727 2 0.1061636104582763 0.0023336869222609488 0.9438714419765777 ['ENST00000513117.1_1_5:6633573-6668378:+|nuORF'] 107756 16697 TAMDVVYAL True NCI_RA007_Epitope_Rep1 981.4841189940099 981.48302993586 69.069 2 0.106157468483977 0.0023336869222609488 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 6877 16245 AQIHDLVLV True PC9_epitope_Rep6 1006.58113061334 1006.58002993586 74.849 2 0.10614889308927503 0.0023336869222609488 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 77412 18546 NYMEVVSLL True NCI_RA007_Epitope_Rep3 1066.53688284286 1066.53578993586 81.151 2 0.1061434821929763 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000115159|P43304-2|GPD2', 'ENSG00000115159|ENST00000438166|GPD2'] 124387 6235 VLEDSDLK True PC9_epitope_Rep2 917.4705771048499 917.46948993586 29.38 2 0.10614224797249432 0.0023336869222609488 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 97818 14329 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 60.202 2 0.10614039675472278 0.0023336869222609488 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 102825 20920 SQFPGAITL True PC9_epitope_Rep5 932.4967322830399 932.49562993586 85.525 2 0.10612857898193749 0.0023336869222609488 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 3878 8864 AHDDGRWSL True PC9_epitope_Rep2 1055.47845644995 1055.47734993586 39.447 2 0.10612708763471093 0.0023336869222609488 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 87390 13153 QTDPTLLSV True H1975_Epitope_Rep2 972.5127762699999 972.51222496793 55.715 1 0.10611983317265782 0.0023336869222609488 0.9438714419765777 ['ENSG00000144867|ENST00000678299|SRPRB'] 53603 17150 KVVNIVPVI True PC9_epitope_Rep6 979.6430025939098 979.64190993586 78.553 2 0.10610983848983374 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 8356 10353 ATLTNILEH True NCI_RA007_Epitope_Rep3 1010.53965972418 1010.53856993586 47.787 2 0.10610377878732638 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'nc|ENSG00000140853|Q86WI3-3|NLRC5'] 38800 9320 HHYSGNNIEL True PC9_epitope_Rep5 1182.5417849825 1182.54013490379 40.802 3 0.10610249155116416 0.0023336869222609488 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 9901 22837 AYPEYLITF True PC9_epitope_Rep5 1115.55391280599 1115.55337496793 92.839 1 0.10608769399489297 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 69058 8207 LVIITAGAR True H1975_Epitope_Rep1 912.5756513100799 912.57454993586 36.51 2 0.10608562825348189 0.0023336869222609488 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 54295 11460 KYPSDLPYM True NCI_RA007_Epitope_Rep5 1112.5212327787199 1112.52012993586 50.729 2 0.1060844671480918 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG', 'ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG'] 91855 7628 RPNPPPVSV True PC9_epitope_Rep2 961.53451477409 961.53340993586 34.712 2 0.10607361172399274 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 86053 20012 QPLPVILHV True PC9_epitope_Rep5 1014.6226015025001 1014.62150993586 82.032 2 0.10606955689833412 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ATF7IP|p.S777C|1|0.33|ENSG00000171681|chr12:14460666-14460666|C/G|missense_variant'] 31870 5209 GEQEPPPPP True H1975_Epitope_Rep1 946.4396113297398 946.43850993586 25.099 2 0.10606314321730438 0.0023336869222609488 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 105059 5964 STITGVMDK True NCI_RA007_Epitope_Rep3 950.4742825863 950.47318993586 30.441 2 0.10606119541017275 0.0023336869222609488 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 60304 6159 LIEVDDER True NCI_RA007_Epitope_Rep5 987.4872897981498 987.48618993586 30.369 2 0.10605850118611454 0.0023336869222609488 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6'] 35708 5689 GTSEFITGK True NCI_RA007_Epitope_Rep3 938.4709114580198 938.46980993586 29.358 2 0.10605305567506706 0.0023336869222609488 0.9438714419765777 ['ENSG00000110002|ENST00000456829|VWA5A'] 100123 18860 SLLDDLHSA True PC9_epitope_Rep3 969.47672511445 969.47562993586 77.769 2 0.10605250254010974 0.0023336869222609488 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 132503 6896 VYPERSTSY True PC9_epitope_Rep3 1100.51383889916 1100.51274993586 31.54 2 0.1060373995498379 0.0023336869222609488 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 114409 8729 TSDSTVYDY True H1975_Epitope_Rep3 1049.41893545481 1049.41837496793 38.58 1 0.10603311365631445 0.0023336869222609488 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 18774 15353 ELDPTNMTYI True H1975_Epitope_Rep2 1195.54309042211 1195.54198993586 64.213 2 0.10602795860404034 0.0023336869222609488 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 138165 8180 YQNENEVGV True PC9_epitope_Rep6 1050.4618033262998 1050.4607099358602 41.023 2 0.10602380973441791 0.0023336869222609488 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 16502 9452 EENFAVEA True H1975_Epitope_Rep3 907.3923267841499 907.39177496793 41.361 1 0.10602047802610749 0.0023336869222609488 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 14344 12721 DTDSINLY True H1975_Epitope_Rep2 939.4185415319901 939.41744993586 54.032 2 0.10601012227966163 0.0023336869222609488 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61719906-61720176:-|nuORF'] 135969 5997 YFDPANGK True NCI_RA007_Epitope_Rep2 910.4184819623399 910.41738993586 27.938 2 0.10600987510679576 0.0023336869222609488 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 34936 9050 GQWKKGFVL True NCI_RA007_Epitope_Rep1 1061.6022004110898 1061.6011099358602 39.205 2 0.10600949756744496 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF'] 37661 14909 HAGVISVL True PC9_epitope_Rep3 794.46503823194 794.46448496793 62.483 1 0.10600129918805669 0.0023336869222609488 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 76697 4357 NTNPNFVR True NCI_RA007_Epitope_Rep5 960.4777281739599 960.47662993586 23.371 2 0.10600061381341297 0.0023336869222609488 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 98858 22812 SIVDFLITA True PC9_epitope_Rep4 977.5433481222899 977.54279496793 95.968 1 0.10600059149653467 0.0023336869222609488 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 54107 7153 KYMEDYHQF True NCI_RA007_Epitope_Rep3 1259.52810906431 1259.5270099358602 35.253 2 0.10600025002155604 0.0023336869222609488 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 2228 7723 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.43850993586 34.69 2 0.10599947800926945 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 70211 23861 LYLPSFFTY True PC9_epitope_Rep1 1149.57464825057 1149.5740749679298 96.583 1 0.10599589668169437 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 1320 6422 AEEAARLSVAA True H1975_Epitope_Rep2 1086.56693710118 1086.5658499358601 29.622 2 0.10599456446042345 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 41011 18416 HYGLPVVV True PC9_epitope_Rep1 882.49633836022 882.49578496793 75.627 1 0.10599185249725256 0.0023336869222609488 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 130886 13298 VVHDGFEGL True PC9_epitope_Rep2 971.47124581119 971.47014993586 56.428 2 0.1059796040642655 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 129254 10088 VTDPSTLEQY True H1975_Epitope_Rep1 1151.53463391339 1151.5340749679299 43.741 1 0.10597937895115563 0.0023336869222609488 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 4018 4568 AHISGATSV True PC9_epitope_Rep3 841.4293809992101 841.42828993586 22.662 2 0.10597884806249926 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 35543 15467 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.5172549679301 64.314 1 0.10596219205090587 0.0023336869222609488 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 37990 9658 HEGPVWQV True H1975_Epitope_Rep3 950.46101548066 950.45990993586 42.168 2 0.10595917948545495 0.0023336869222609488 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 107760 15946 TAMDVVYAL True NCI_RA007_Epitope_Rep4 981.4841189940099 981.48357496793 69.207 1 0.10593884585081913 0.0023336869222609488 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 74410 12539 NIVEKLREV True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 53.537 2 0.10593865701568289 0.0023336869222609488 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 95568 5243 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 25.556 2 0.10593639833256004 0.0023336869222609488 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 96025 9880 SEALPSDIA True H1975_Epitope_Rep2 901.43927697657 901.43872496793 42.991 1 0.10593172822609548 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 123321 11974 VHTIVNETL True PC9_epitope_Rep2 1024.55530978832 1024.5542099358602 51.377 2 0.10592441273492946 0.0023336869222609488 0.9438714419765777 ['ENSG00000023516|ENST00000025301|AKAP11', 'AKAP11|p.S1150Rfs*7|1|0.23|ENSG00000023516|chr13:42302192-42302195|TGTC/-|frameshift_variant'] 140848 13742 YYTDIM[Oxidation]HTL True PC9_epitope_Rep4 1171.5219614351497 1171.5208699358602 60.756 2 0.10592130777319582 0.0023336869222609488 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 26547 19695 FIVHTIEEI True PC9_epitope_Rep5 1099.5913609438699 1099.59026993586 80.807 2 0.1059190600706564 0.0023336869222609488 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 97789 13644 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.4914349679301 57.338 1 0.10590240946479852 0.0023336869222609488 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 88050 8631 QVVEEIRQA True PC9_epitope_Rep5 1070.57202248162 1070.57092993586 38.143 2 0.10589142793536482 0.0023336869222609488 0.9438714419765777 ['ENSG00000121211|ENST00000240488|MND1'] 9032 17277 AVIGDVIRV True PC9_epitope_Rep4 940.57056592964 940.56946993586 74.461 2 0.10588623577304673 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 126516 16082 VPNLQTVSV True PC9_epitope_Rep6 955.53384606775 955.53274993586 74.19 2 0.10588054437324462 0.0023336869222609488 0.9438714419765777 ['ENSG00000105866|ENST00000222584|SP4'] 96554 12053 SELPGAFEA True NCI_RA007_Epitope_Rep5 919.4287122928699 919.42760993586 53.02 2 0.10587719313133225 0.0023336869222609488 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 26814 15853 FLEEVTEYY True H1975_Epitope_Rep2 1191.53357128423 1191.53246993586 66.174 2 0.10587441313950609 0.0023336869222609488 0.9438714419765777 ['ENSG00000158615|ENST00000367188|PPP1R15B'] 43422 13526 IHSPVVNEL True PC9_epitope_Rep1 1006.54474510462 1006.54364993586 56.883 2 0.10587257364209188 0.0023336869222609488 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 1889 5177 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5965849037902 25.013 3 0.10586735923116292 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 88983 2890 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 15.351 2 0.1058584905161803 0.0023336869222609488 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 6333 5976 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 29.933 2 0.10585837424790402 0.0023336869222609488 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 1114 5540 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44286993586 26.317 2 0.10585698252024156 0.0023336869222609488 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 37541 20354 GYMEGYYTF True PC9_epitope_Rep4 1129.44264810485 1129.4415499358602 86.434 2 0.10585104118616845 0.0023336869222609488 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 71965 20385 MPWFKGWKV True PC9_epitope_Rep3 1177.61065691981 1177.60900490379 83.663 3 0.10585034402818688 0.0023336869222609488 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 27291 22305 FLYPFPLAL True PC9_epitope_Rep6 1079.60555445603 1079.6044499358602 98.766 2 0.10584751959311789 0.0023336869222609488 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 97006 6549 SEVPVTASA True H1975_Epitope_Rep2 859.42871229287 859.42816496793 30.101 1 0.10584277079717191 0.0023336869222609488 0.9438714419765777 ['ENST00000420416.1_3_10:14920949-14938948:+|nuORF', 'ENST00000313519.9_2_10:14920918-14938948:+|nuORF'] 69342 11302 LVPVLSAK True PC9_epitope_Rep1 825.53238951577 825.53128993586 48.352 2 0.10584160533035236 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 52747 9931 KQMDSNWTL True NCI_RA007_Epitope_Rep3 1121.51754438061 1121.51644993586 46.145 2 0.10583098094735126 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000108039|Q9NQW7-2|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7-4|XPNPEP1', 'ENSG00000108039|ENST00000502935|XPNPEP1', 'ENST00000475123.1_1_10:111651462-111667565:-|nuORF'] 2467 6293 AEQPPHLTP True H1975_Epitope_Rep2 988.4977949122 988.4972449679301 29.143 1 0.10583044780411092 0.0023336869222609488 0.9438714419765777 ['ENSG00000146733|ENST00000275605|PSPH'] 14999 20702 DYVEGLRVF True PC9_epitope_Rep3 1096.5553097883198 1096.5542099358602 84.904 2 0.10582881414783758 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 132523 23124 VYPFPTFQPAF True PC9_epitope_Rep2 1312.6492101731599 1312.64810993586 94.437 2 0.10582743370661418 0.0023336869222609488 0.9438714419765777 ['ENSG00000132017|ENST00000254337|DCAF15'] 104924 5444 STFSTNYR True NCI_RA007_Epitope_Rep5 974.4457593393399 974.44466993586 27.628 2 0.10582084119654875 0.0023336869222609488 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 31013 22410 GAVDPLLAL True PC9_epitope_Rep1 867.50656869075 867.50546993586 91.019 2 0.10581711298872165 0.0023336869222609488 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 48942 6263 KEYDVAVQA True NCI_RA007_Epitope_Rep5 1021.5080252427298 1021.50692993586 30.769 2 0.10581709564938613 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant'] 109533 19706 THALPIPVI True PC9_epitope_Rep2 959.5804023373499 959.57930993586 81.187 2 0.10581669474116553 0.0023336869222609488 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 137475 21312 YLPELLQTV True PC9_epitope_Rep4 1074.5961119711399 1074.59557496793 90.143 1 0.10581435209734386 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 136561 19870 YHSFVSSVF True PC9_epitope_Rep1 1071.5025459394699 1071.5014499358601 81.248 2 0.10581263533891827 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 38005 7128 HEIEGTGLP True H1975_Epitope_Rep1 951.4661604307499 951.46506993586 32.444 2 0.10581163864847531 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'NIBAN2|p.M44I|1|0.79|ENSG00000136830|chr9:127531702-127531702|C/T|missense_variant'] 129240 8417 VTDMSDAEQY True H1975_Epitope_Rep3 1157.45466934053 1157.45356993586 37.36 2 0.10580982889762858 0.0023336869222609488 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 34830 12830 GQVGGEINV True PC9_epitope_Rep5 871.43994568291 871.43884993586 54.361 2 0.10580952394120383 0.0023336869222609488 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 7639 8341 ASLPLAVTK True NCI_RA007_Epitope_Rep4 898.5487678559 898.54766993586 38.899 2 0.10580866027855428 0.0023336869222609488 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 9492 9936 AWAPKPYHKF True PC9_epitope_Rep1 1243.6502132326698 1243.64857490379 43.08 3 0.10580586923514769 0.0023336869222609488 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 8268 4618 ATIQGAYAR True NCI_RA007_Epitope_Rep4 949.4981292653698 949.49702993586 24.179 2 0.10580428135252413 0.0023336869222609488 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 25997 14586 FHDDDNLSL True PC9_epitope_Rep1 1074.4618033263 1074.4607099358602 60.929 2 0.1057991794487163 0.0023336869222609488 0.9438714419765777 ['ENSG00000152404|ENST00000282251|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 76699 5713 NTNPNFVR True PC9_epitope_Rep3 960.4777281739599 960.47662993586 27.048 2 0.10577497915632834 0.0023568514881402024 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 48765 8413 KEQIDIYEA True H1975_Epitope_Rep3 1107.54480467427 1107.54370993586 37.344 2 0.105772742008616 0.0023568514881402024 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 125847 11888 VNQIGSVTESL True H1975_Epitope_Rep3 1145.59281749585 1145.59172993586 50.877 2 0.10576826612716037 0.0023568514881402024 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 23656 21558 EYGNIIVTL True PC9_epitope_Rep2 1020.54916177872 1020.54806993586 88.392 2 0.1057607337584619 0.0023568514881402024 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 115215 8510 TVAVPLVGK True NCI_RA007_Epitope_Rep5 882.5538532363399 882.55274993586 39.418 2 0.1057539532900724 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 96321 11303 SEEVTPIAV True H1975_Epitope_Rep2 943.4862271689899 943.4856749679301 48.525 1 0.10575164917829685 0.0023568514881402024 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 125971 10301 VPAGGAVAV True PC9_epitope_Rep5 739.42283906679 739.42229496793 44.61 1 0.10574837275997243 0.0023568514881402024 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 2092 11996 AELNAQIITA True H1975_Epitope_Rep2 1042.56587447202 1042.56537496793 51.224 1 0.1057394975777582 0.0023568514881402024 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 2043 9408 AELEGLVRA True NCI_RA007_Epitope_Rep4 956.5290950404799 956.52798993586 43.047 2 0.10572356979541724 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000073969|P46459-2|NSF', 'ENSG00000073969|ENST00000398238|NSF'] 76058 11363 NRLLEATSY True PC9_epitope_Rep4 1065.54547338061 1065.54436993586 51.481 2 0.10571185837895405 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 96463 8052 SEITDTVAA True H1975_Epitope_Rep2 905.43419159613 905.43364496793 35.92 1 0.10571184724117519 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 131129 7893 VVPEM[Oxidation]TEILK True H1975_Epitope_Rep1 1173.63151188413 1173.6304099358601 35.312 2 0.10570352653204697 0.0023568514881402024 0.9438714419765777 ['ENST00000559973.5_1_15:76508902-76510013:-|nuORF', 'ENST00000560179.1_1_15:76508902-76518306:-|nuORF', 'nc|ENSG00000140374|P13804-2|ETFA', 'ENSG00000140374|ENST00000557943|ETFA'] 26171 14626 FHQPDSVIL True PC9_epitope_Rep4 1054.54474510462 1054.54364993586 64.188 2 0.10569888974654419 0.0023568514881402024 0.9438714419765777 ['ENSG00000133056|ENST00000684373|PIK3C2B', 'PIK3C2B|p.R970Pfs*17|1|0.25|ENSG00000133056|chr1:204443543-204443556|CAGATACTGGTAGC/-|frameshift_variant'] 3242 5228 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 25.5 2 0.10569098789896236 0.0023568514881402024 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 105139 21147 STLSDLRVYL True PC9_epitope_Rep1 1165.63428838501 1165.6331899358602 86.174 2 0.10568528474586691 0.0023568514881402024 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 68693 22588 LVDDNYFYL True PC9_epitope_Rep1 1160.5389910178399 1160.5378899358602 91.692 2 0.1056746879410882 0.0023568514881402024 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 62718 22173 LLYEDALYTV True PC9_epitope_Rep1 1198.6121559581 1198.6110499358601 90.106 2 0.10566969279689144 0.0023568514881402024 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000587504.5_1_17:73835995-73839803:-|nuORF', 'nc|ENSG00000092929|Q70J99-2|UNC13D', 'ENST00000591563.5_1_17:73836050-73840487:-|nuORF', 'ENST00000585574.5_1_17:73837076-73839803:-|nuORF'] 128324 11922 VSDGIIAPGY True H1975_Epitope_Rep2 990.5022115862998 990.50110993586 50.937 2 0.10565932563305255 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000446622.5_1_2:216199652-216212358:+|nuORF'] 117801 17606 VAMLPGLAL True NCI_RA007_Epitope_Rep3 883.5201105799099 883.51900993586 77.209 2 0.10565328949917853 0.0023568514881402024 0.9438714419765777 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 140639 15146 YYPAKIEAI True PC9_epitope_Rep5 1066.5698972233 1066.5688099358601 63.266 2 0.10564776818399021 0.0023568514881402024 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.V175Sfs*48|1|0.38|ENSG00000129292|chr8:132803834-132803834|G/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 63955 13236 LQADPSVSV True PC9_epitope_Rep2 914.47091145802 914.46980993586 56.189 2 0.10564729144897207 0.0023568514881402024 0.9438714419765777 ['ENSG00000119686|ENST00000238667|FLVCR2'] 27284 24218 FLYPFPLAL True PC9_epitope_Rep2 1079.60555445603 1079.6044499358602 98.693 2 0.10563953867063526 0.0023568514881402024 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 127227 20853 VQIGDIVTV True PC9_epitope_Rep2 942.5385970950199 942.53750993586 85.656 2 0.10562530114992748 0.0023568514881402024 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 4086 12819 AHSNLASVL True PC9_epitope_Rep1 910.4872302285 910.48612993586 54.182 2 0.1056213815741123 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 34569 12527 GQFSGFPFEK True NCI_RA007_Epitope_Rep5 1142.53965972418 1142.53856993586 54.84 2 0.1056205736428678 0.0023568514881402024 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK'] 21107 10027 ERDPRSLTL True PC9_epitope_Rep5 1085.5829215184901 1085.58182993586 43.548 2 0.10561997699841341 0.0023568514881402024 0.9438714419765777 ['ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 1375 6055 AEEEPSTSATV True H1975_Epitope_Rep3 1119.49316302423 1119.4920699358602 28.305 2 0.10561136116762401 0.0023568514881402024 0.9438714419765777 ['ENSG00000100023|ENST00000398831|PPIL2', 'ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 72484 12030 M[Oxidation]VAPAVASV True PC9_epitope_Rep2 859.4473399429099 859.44624993586 51.59 2 0.10561000469813148 0.0023568514881402024 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 70924 15054 MELITPISA True H1975_Epitope_Rep1 973.5154191222899 973.51487496793 63.156 1 0.1056077293489467 0.0023568514881402024 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 12286 9027 DISLSDYK True H1975_Epitope_Rep3 939.45492704071 939.4543749679301 39.717 1 0.10560658246261632 0.0023568514881402024 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 140880 19965 YYTSVTPVL True PC9_epitope_Rep2 1041.5382627418498 1041.53767496793 82.195 1 0.10560160707334265 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 31486 12445 GEEMPGLSV True H1975_Epitope_Rep1 917.4164333570099 917.4158849679301 52.907 1 0.10559360732009855 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 21646 6826 ERTQENVTL True PC9_epitope_Rep2 1088.5462016565998 1088.5451099358602 31.662 2 0.10558550751022466 0.0023568514881402024 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 75305 17395 NPTLILAA True PC9_epitope_Rep6 811.4803539429099 811.47980496793 79.526 1 0.10558376580973944 0.0023568514881402024 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 26101 9993 FHEPSQEL True PC9_epitope_Rep5 985.4505103666098 985.44940993586 43.413 2 0.1055834771804838 0.0023568514881402024 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 46522 6940 ITQGTPLKY True H1975_Epitope_Rep2 1019.5651461960299 1019.56404993586 31.615 2 0.10557897147995852 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.D1460N|1|0.44|ENSG00000196498|chr12:124344933-124344933|C/T|missense_variant'] 52291 9146 KPAEFTVDA True PC9_epitope_Rep2 976.4865615221598 976.48546993586 40.52 2 0.10557242113411834 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 86380 9367 QQLKKLEEL True PC9_epitope_Rep5 1127.65502382959 1127.65392993586 40.984 2 0.10556659789292802 0.0023568514881402024 0.9438714419765777 ['STAT1|p.D627Tfs*31|1|0.13|ENSG00000115415|chr2:190976999-190977020|AGGGTTCAACCGCATGGAAGTC/-|frameshift_variant', 'nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 99190 22697 SLASLLVSV True PC9_epitope_Rep2 887.5327834385901 887.53168993586 92.799 2 0.10556351053401795 0.0023568514881402024 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 23628 21063 EYFSYPVSL True PC9_epitope_Rep4 1103.51752729727 1103.5169749679299 89.178 1 0.10555480090159346 0.0023568514881402024 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 102424 12316 SPVYVGRVV True PC9_epitope_Rep1 974.5549158654999 974.55380993586 52.228 2 0.10554410774980896 0.0023568514881402024 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 114846 12134 TTDFPGNYSGY True H1975_Epitope_Rep3 1220.49858275784 1220.4974899358601 51.842 2 0.1055439866741854 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 53643 18612 KWNPTAGVAF True PC9_epitope_Rep3 1089.56072952193 1089.5596299358601 76.814 2 0.10554037279305599 0.0023568514881402024 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 27696 9338 FQDGTKATF True PC9_epitope_Rep5 1013.4818104948899 1013.48070993586 40.872 2 0.1055370965757856 0.0023568514881402024 0.9438714419765777 ['ENSG00000110711|ENST00000279146|AIP'] 38496 5995 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 28.114 2 0.10553502021963726 0.0023568514881402024 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 31675 14511 GEIENIELP True H1975_Epitope_Rep2 1012.5076908895599 1012.50658993586 60.975 2 0.10553375729871639 0.0023568514881402024 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL'] 38749 10961 HHVLQNDVL True PC9_epitope_Rep1 1073.56179215109 1073.5606899358602 47.049 2 0.10552761165076265 0.0023568514881402024 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 40647 18416 HTIDTILTV True PC9_epitope_Rep5 1011.56006081559 1011.55896993586 75.857 2 0.1055272013331805 0.0023568514881402024 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 2601 8348 AESLGQYAA True H1975_Epitope_Rep3 908.4239612655999 908.4234149679301 37.095 1 0.1055175615603038 0.0023568514881402024 0.9438714419765777 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 127892 18696 VRPGILVL True PC9_epitope_Rep5 865.5749230340899 865.57382993586 76.931 2 0.10551423955505539 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000167118|Q9BTM9-2|URM1', 'ENST00000470840.5_1_9:131140285-131152010:+|nuORF', 'ENSG00000167118|ENST00000372853|URM1'] 32604 10043 GHDASQITL True PC9_epitope_Rep5 940.46140940348 940.4608649679301 43.61 1 0.1055074934949998 0.0023568514881402024 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 54095 14790 KYMDVQFDF True NCI_RA007_Epitope_Rep2 1191.52704643515 1191.5259499358601 62.206 2 0.10550469001412828 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 5603 9995 APAAATVAV True PC9_epitope_Rep2 769.4334037504899 769.4328549679301 43.774 1 0.10550422141871191 0.0023568514881402024 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 35625 4707 GTLNQPLTK True NCI_RA007_Epitope_Rep5 970.54474510462 970.54364993586 24.791 2 0.10549948000047095 0.0023568514881402024 0.9438714419765777 ['ENSG00000103671|ENST00000261884|TRIP4'] 7550 18001 ASFNDTFVHV True PC9_epitope_Rep2 1135.5298233164701 1135.5287299358602 74.543 2 0.10548332533894532 0.0023568514881402024 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 33175 6304 GKTVISQSL True NCI_RA007_Epitope_Rep3 931.5338460677499 931.53274993586 31.798 2 0.10548127796926711 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 102472 7635 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 34.737 2 0.10547262486530225 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 129307 10820 VTDSGPTFNY True H1975_Epitope_Rep3 1099.4822044177101 1099.4816749679298 46.698 1 0.10547236408859155 0.0023568514881402024 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 41018 16713 HYGLPVVV True PC9_epitope_Rep4 882.49633836022 882.49578496793 72.256 1 0.10546654191302679 0.0023568514881402024 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 52581 10368 KPYESYIGA True PC9_epitope_Rep2 1026.5022115862998 1026.50110993586 45.205 2 0.10545609315944286 0.0023568514881402024 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 120253 10934 VFPDKGYSF True NCI_RA007_Epitope_Rep5 1058.5072969667401 1058.5061899358602 48.697 2 0.105455888252922 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 15604 6368 EAVAAAVGT True H1975_Epitope_Rep3 787.4075829254699 787.40703496793 29.478 1 0.10545526313807596 0.0023568514881402024 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 139503 23058 YTIGEVPISFV True PC9_epitope_Rep1 1223.64379043955 1223.64268993586 93.493 2 0.10545377807109715 0.0023568514881402024 0.9438714419765777 ['ENSG00000000419|ENST00000371588|DPM1', 'ENST00000466152.5_1_20:49551671-49557490:-|nuORF'] 105903 23536 SVLDGLLYV True PC9_epitope_Rep5 977.54334812229 977.54279496793 95.516 1 0.105452415527737 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 63564 18701 LPLFLGRLP True PC9_epitope_Rep6 1024.64333694708 1024.64222993586 84.575 2 0.105451665671851 0.0023568514881402024 0.9438714419765777 ['ENSG00000283632|ENST00000413988|EXOC3L2', 'nc|ENSG00000283632|Q2M3D2|EXOC3L2'] 114367 9186 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4440499358602 40.287 2 0.10544792272930156 0.0023568514881402024 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 75963 8922 NRGPAYGL True PC9_epitope_Rep3 846.4348007328199 846.43370993586 39.269 2 0.10544553032414102 0.0023568514881402024 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENST00000592923.5_1_19:11649661-11650145:+|nuORF', 'ENST00000588468.1_1_19:11649742-11652758:+|nuORF', 'CNN1|p.Q216Rfs*4|1|0.2|ENSG00000130176|chr19:11549466-11549466|C/-|frameshift_variant', 'ENSG00000130176|ENST00000252456|CNN1'] 6316 6421 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 29.725 2 0.10544027714117363 0.0023568514881402024 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 11882 16770 DHNYQSYIL True PC9_epitope_Rep4 1151.52473793603 1151.52364993586 72.473 2 0.10542599866582729 0.0023568514881402024 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 72925 14105 NAYTGVVYL True H1975_Epitope_Rep3 998.5072969667399 998.5067449679301 59.583 1 0.10542517664143045 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 3952 15631 AHDVDPIEL True PC9_epitope_Rep3 1007.4923751785899 1007.49126993586 65.271 2 0.10542087290522534 0.0023568514881402024 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 47201 16576 IYAPKLQEF True PC9_epitope_Rep4 1107.59644632431 1107.5953499358602 71.735 2 0.10541645188052126 0.0023568514881402024 0.9438714419765777 ['ENSG00000175305|ENST00000308108|CCNE2'] 116464 11922 TYAKQYEEF True PC9_epitope_Rep5 1177.52915461013 1177.52804993586 50.855 2 0.10540602324358027 0.0023568514881402024 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 113806 19769 TRDVAFLL True PC9_epitope_Rep1 933.5283667644899 933.52726993586 80.869 2 0.10540334953914873 0.0023568514881402024 0.9438714419765777 ['ENSG00000164291|ENST00000380009|ARSK'] 140521 10210 YYITTRAQF True NCI_RA007_Epitope_Rep5 1161.58185888933 1161.5807699358602 45.905 2 0.10539922448343643 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENSG00000176105|ENST00000314574|YES1'] 97832 13683 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 57.659 2 0.10539775074312815 0.0023568514881402024 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 71421 24246 MIPLLLAAL True PC9_epitope_Rep2 953.5983609006099 953.59726993586 98.802 2 0.10539387803409084 0.0023568514881402024 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 57186 8187 LEESSPIAA True H1975_Epitope_Rep1 915.4549270407099 915.4543749679301 36.432 1 0.10539012708312219 0.0023568514881402024 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 119093 10881 VEIAYSDVA True H1975_Epitope_Rep1 965.4705771048499 965.47002496793 46.813 1 0.10538839582499769 0.0023568514881402024 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 113815 7618 TREAGSALL True PC9_epitope_Rep2 916.4977949121999 916.49668993586 34.675 2 0.10538774251820755 0.0023568514881402024 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2', 'CCNA2|p.A20P|1|0.15|ENSG00000145386|chr4:121823571-121823571|C/G|missense_variant'] 91759 10927 RPKPSSSPVIF True PC9_epitope_Rep1 1213.68190728377 1213.68025490379 46.916 3 0.1053818599098264 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 45128 7014 IQVRETQAL True NCI_RA007_Epitope_Rep4 1056.5927579262 1056.5916699358602 33.607 2 0.10538173116598532 0.0023568514881402024 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3'] 102342 5041 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 27.019 2 0.1053801851485454 0.0023568514881402024 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 2181 11668 AEMSTPLSV True H1975_Epitope_Rep3 933.44773348529 933.44662993586 50.016 2 0.10538011516045798 0.0023568514881402024 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1'] 85485 19345 QLIDIIHTA True PC9_epitope_Rep3 1022.5760452329 1022.57494993586 79.632 2 0.10536268464841636 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 6279 7607 APRPTIINA True PC9_epitope_Rep6 951.5501648382299 951.54906993586 38.546 2 0.1053603056961155 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 40487 15273 HSEQVFAL True PC9_epitope_Rep1 929.4606811274899 929.45958993586 63.567 2 0.10535861423939612 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 11987 6550 DHVTATQL True PC9_epitope_Rep2 883.4399456829101 883.43884993586 30.608 2 0.10535552286456264 0.0023568514881402024 0.9438714419765777 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant'] 114156 13023 TRSQPFTL True PC9_epitope_Rep5 948.5028802926399 948.50178993586 55.098 2 0.10535522359672245 0.0023568514881402024 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 38824 6046 HIDVGGHM[Oxidation]Y True H1975_Epitope_Rep3 1043.44946520123 1043.44836993586 28.269 2 0.10535471530348221 0.0023568514881402024 0.9438714419765777 ['ENSG00000134504|ENST00000580059|KCTD1', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15'] 25837 17353 FGFEITHEV True PC9_epitope_Rep6 1077.51311062317 1077.51200993586 79.364 2 0.10535029681227029 0.0023568514881402024 0.9438714419765777 ['ENST00000486019.1_1_22:39175456-39190144:-|nuORF', 'ENSG00000100246|ENST00000216068|DNAL4'] 44743 12647 IPRPVDGVEV True PC9_epitope_Rep4 1079.59750895347 1079.59640993586 56.487 2 0.1053486487909794 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 136591 17617 YHVPVVVVP True PC9_epitope_Rep4 1007.5804023373499 1007.57930993586 75.786 2 0.10534213786196288 0.0023568514881402024 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 16044 9314 EEALPVTTA True H1975_Epitope_Rep2 929.47057710485 929.46948993586 40.786 2 0.10533168439646826 0.0023568514881402024 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 38472 8147 HHAESKNGWTL True PC9_epitope_Rep3 1278.61053324866 1278.6088949037899 36.317 3 0.10532921051674841 0.0023568514881402024 0.9438714419765777 ['ENSG00000110048|ENST00000263847|OSBP'] 106813 16317 SYGSVFKAI True PC9_epitope_Rep2 970.5123823471799 970.51128993586 68.008 2 0.10532195433963781 0.0023568514881402024 0.9438714419765777 ['STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion', 'ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 107086 21461 SYMEVPTYL True PC9_epitope_Rep3 1101.50524836141 1101.5041499358601 87.841 2 0.10532159260233158 0.0023568514881402024 0.9438714419765777 ['ENSG00000162511|ENST00000294507|LAPTM5'] 72094 18669 MRDPIRILV True PC9_epitope_Rep3 1111.65358436095 1111.65248993586 77.027 2 0.10531689000138479 0.0023568514881402024 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 118781 6240 VEEADAAMA True H1975_Epitope_Rep3 905.3800478482899 905.3794949679301 29.014 1 0.10530770254562231 0.0023568514881402024 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0', 'HNRNPA0|p.S56Y|1|0.26|ENSG00000177733|chr5:137753900-137753900|G/T|missense_variant'] 37735 11831 HAVGDIPGV True PC9_epitope_Rep1 863.45011644379 863.44900993586 50.373 2 0.10530326521200674 0.0023568514881402024 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 62755 13927 LMAEMGVHSV True PC9_epitope_Rep1 1072.50453716876 1072.5034299358601 58.405 2 0.10529313823370724 0.0023859861069163396 0.9438714419765777 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'ENST00000358711.7_1_20:62571331-62572425:-|nuORF'] 105242 6034 STSNSFNLK True NCI_RA007_Epitope_Rep1 996.48762415132 996.48652993586 27.512 2 0.1052917532353846 0.0023859861069163396 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 10920 10972 DAVEDLESVGK True NCI_RA007_Epitope_Rep5 1160.55609763396 1160.5550099358602 48.841 2 0.10529092922168265 0.0023859861069163396 0.9438714419765777 ['ENSG00000161634|ENST00000293371|DCD', 'nc|ENSG00000161634|P81605-2|DCD'] 120100 8800 VFIDKQTNL True NCI_RA007_Epitope_Rep4 1076.5866099166 1076.58550993586 40.66 2 0.1052899941357886 0.0023859861069163396 0.9438714419765777 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2', 'nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 125993 10580 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.49088993586 45.642 2 0.10528780534244847 0.0023859861069163396 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 106281 4883 SVQRYVINH True NCI_RA007_Epitope_Rep4 1114.5883412521 1114.5872499358602 25.233 2 0.10527450236132523 0.0023859861069163396 0.9438714419765777 ['ENSG00000116678|ENST00000349533|LEPR', 'nc|ENSG00000116678|P48357-5|LEPR', 'nc|ENSG00000116678|P48357-2|LEPR', 'nc|ENSG00000116678|P48357-4|LEPR', 'nc|ENSG00000116678|P48357-3|LEPR'] 73959 16631 NHM[Oxidation]AVAFVL True PC9_epitope_Rep2 1016.5113371818 1016.51022993586 69.216 2 0.10526717356537021 0.0023859861069163396 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 31361 5125 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.39082993586 24.823 2 0.10525860693885182 0.0023859861069163396 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 77290 17844 NYISGIQTI True PC9_epitope_Rep6 1007.52876068731 1007.52766993586 81.266 2 0.10525801145698781 0.0023859861069163396 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 88583 16570 RALDVNVAL True PC9_epitope_Rep5 969.5607295219299 969.55962993586 68.741 2 0.10525458057391616 0.0023859861069163396 0.9438714419765777 ['nc|ENSG00000114115|P09455|RBP1', 'nc|ENSG00000114115|P09455-2|RBP1', 'nc|ENSG00000114115|P09455-3|RBP1', 'ENSG00000114115|ENST00000672186|RBP1'] 31372 7893 GEAPVPASV True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 35.306 1 0.10525344947233681 0.0023859861069163396 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 45244 17085 IRPENVIIY True PC9_epitope_Rep5 1115.6338944621898 1115.63278993586 70.739 2 0.10525023728742285 0.0023859861069163396 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 25393 20052 FEILPGLSV True H1975_Epitope_Rep3 973.54843350273 973.54732993586 83.922 2 0.10523911240219293 0.0023859861069163396 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 40611 11362 HTDVGLLEY True H1975_Epitope_Rep2 1045.50802524273 1045.50747496793 48.753 1 0.10523699234054383 0.0023859861069163396 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF'] 42594 5795 IESSSPEV True H1975_Epitope_Rep2 846.39707781142 846.3965249679301 27.28 1 0.10523571302970582 0.0023859861069163396 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2'] 117420 10268 VADLVENSY True H1975_Epitope_Rep3 1008.4763907612801 1008.47528993586 44.547 2 0.105233034811118 0.002397291061100956 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 72066 20013 MRASSFLIV True PC9_epitope_Rep5 1022.5582869937799 1022.55718993586 82.033 2 0.10523173059582629 0.002397291061100956 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 136539 14414 YHSDIVQSL True PC9_epitope_Rep3 1060.5189242796 1060.5178299358602 60.547 2 0.10522899977548499 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31'] 115723 13441 TVLGSLQKV True PC9_epitope_Rep2 943.57023157647 943.56912993586 56.981 2 0.1052238591194497 0.002397291061100956 0.9438714419765777 ['ENSG00000176092|ENST00000308182|CRYBG2', 'ENST00000520372.5_1_1:26655223-26662846:-|nuORF'] 31494 9091 GEEM[Oxidation]PGLSV True H1975_Epitope_Rep3 933.4113483570098 933.4107949679301 39.956 1 0.10521182569700925 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 102328 6829 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 31.283 2 0.10521091188935328 0.002397291061100956 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 132532 19472 VYPGDPLRF True PC9_epitope_Rep3 1062.5498304850598 1062.5487299358601 80.129 2 0.10519976325324996 0.002397291061100956 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 84560 10337 QHDDQQPVVL True PC9_epitope_Rep5 1177.5727507576098 1177.57164993586 44.745 2 0.10519818707207802 0.002397291061100956 0.9438714419765777 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 71401 22299 MIIENFEAL True PC9_epitope_Rep1 1078.53688284286 1078.53578993586 90.584 2 0.10518424659791405 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'RBM26|p.S30Lfs*6|1|0.39|ENSG00000139746|chr13:79378875-79378890|TATTTTGCTAGGGCGG/-|frameshift_variant', 'nc|ENSG00000139746|Q5T8P6-6|RBM26', 'ENST00000472143.2_1_13:79951480-79979915:-|nuORF'] 120248 10540 VFPDKGYSF True NCI_RA007_Epitope_Rep3 1058.5072969667401 1058.5061899358602 48.516 2 0.10516758590030248 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 113924 20119 TRIGVMSLI True PC9_epitope_Rep2 988.5739370579199 988.57282993586 82.796 2 0.10516270014496158 0.002397291061100956 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 39705 7358 HPTWALKEA True PC9_epitope_Rep6 1051.5450794577898 1051.54398993586 37.486 2 0.10515422159664004 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 84098 9069 QEQFNSIAA True H1975_Epitope_Rep3 1006.4719740871798 1006.47147496793 39.869 1 0.10515292992596854 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'ENST00000462875.1_1_6:31609004-31609235:-|nuORF'] 124804 18241 VLLGKVYVV True PC9_epitope_Rep2 988.63210355704 988.63100993586 75.483 2 0.10514942140691204 0.002397291061100956 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24|p.G413S|1|0.3|ENSG00000114796|chr3:183671046-183671046|G/A|missense_variant'] 91712 19650 RPGTALVLLEA True PC9_epitope_Rep1 1138.6710082469 1138.66990993586 80.408 2 0.1051426161782437 0.002397291061100956 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 140806 14382 YYSPHGHILVL True PC9_epitope_Rep4 1297.68190728377 1297.68025490379 63.229 3 0.10514248826339184 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 103486 6409 SRAPSVATV True PC9_epitope_Rep5 886.4872302285 886.48612993586 29.629 2 0.1051418458592402 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 46659 20831 ITVGSLVTV True PC9_epitope_Rep5 887.5327834385901 887.5322349679301 85.175 1 0.10513949765519981 0.002397291061100956 0.9438714419765777 ['ENSG00000025796|ENST00000369002|SEC63', 'ENST00000425785.1_1_1:98011504-98011909:+|nuORF'] 138332 16355 YRAPEVLL True PC9_epitope_Rep5 959.5440168286299 959.54290993586 67.907 2 0.10513821608711786 0.002397291061100956 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 102934 20182 SQIISLQTL True PC9_epitope_Rep4 1001.5757108797301 1001.5746099358599 85.767 2 0.10513775036848519 0.002397291061100956 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 90843 4941 RKVPGVTAI True NCI_RA007_Epitope_Rep3 939.5865503469499 939.58544993586 26.43 2 0.1051217724669524 0.002397291061100956 0.9438714419765777 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000473375.1_1_3:180669142-180671642:+|nuORF', 'ENST00000573957.1_1_17:7497970-7499300:-|nuORF', 'TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1'] 11766 17182 DHIHIIAL True PC9_epitope_Rep3 930.52870111766 930.52760993586 71.247 2 0.10510589937272216 0.002397291061100956 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 43275 17440 IHDGMNLEL True PC9_epitope_Rep3 1040.49608066004 1040.49498993586 72.256 2 0.10510254403341135 0.002397291061100956 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 74225 13740 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 57.997 2 0.10510176289286927 0.002397291061100956 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 35853 17678 GVAANDVIVHI True PC9_epitope_Rep3 1106.6084079903399 1106.60730993586 73.193 2 0.10509620312823707 0.002397291061100956 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 47187 12689 IYAGGIKSI True PC9_epitope_Rep1 920.53311779176 920.53202993586 53.679 2 0.10509411585193829 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4', 'ENST00000573023.6_1_16:67984709-67996179:-|nuORF'] 104187 5372 SSDDSKLEY True H1975_Epitope_Rep1 1042.44548455582 1042.44438993586 25.721 2 0.10509191102025497 0.002397291061100956 0.9438714419765777 ['ACAP2|p.V261L|1|0.12|ENSG00000114331|chr3:195320777-195320777|C/A|missense_variant', 'ENSG00000114331|ENST00000326793|ACAP2'] 47575 8130 IYNGDMEKI True NCI_RA007_Epitope_Rep4 1081.51139637101 1081.51028993586 38.063 2 0.10509142799640324 0.002397291061100956 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3', 'ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 6274 9593 APRPTIINA True PC9_epitope_Rep3 951.5501648382299 951.54906993586 41.852 2 0.10508592704954797 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 44651 10104 IPLDPVAGYK True H1975_Epitope_Rep1 1071.5964463243097 1071.5953499358602 43.802 2 0.10508571870470275 0.002397291061100956 0.9438714419765777 ['CON__P12763'] 52331 15716 KPEEQWWNA True PC9_epitope_Rep1 1186.5407223533398 1186.5396299358601 65.274 2 0.10508142396563319 0.002397291061100956 0.9438714419765777 ['ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 106814 17517 SYGSVFKAI True PC9_epitope_Rep3 970.5123823471799 970.51128993586 72.562 2 0.10508090869270717 0.002397291061100956 0.9438714419765777 ['STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion', 'ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 8321 6829 ATLNSIVAK True NCI_RA007_Epitope_Rep4 915.5389314481899 915.53782993586 32.889 2 0.10507821665075147 0.002397291061100956 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 67409 7321 LTEAGDYTAKY True H1975_Epitope_Rep3 1230.57683307854 1230.5757299358602 33.135 2 0.1050757548931963 0.002397291061100956 0.9438714419765777 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 109634 15589 THDITTISI True PC9_epitope_Rep5 999.52367530687 999.52256993586 64.972 2 0.1050734412468534 0.002397291061100956 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 27105 20635 FLQEGDLISA True PC9_epitope_Rep5 1091.54989005471 1091.54937496793 84.425 1 0.1050715432927891 0.002397291061100956 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 23874 16640 EYM[Oxidation]EHVYLI True PC9_epitope_Rep4 1211.5532615634297 1211.55216993586 71.972 2 0.10506576033981373 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 106405 18313 SVTFVAEQV True PC9_epitope_Rep1 978.5022115862997 978.50110993586 75.23 2 0.10505439111586427 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 73322 17096 NELESYAYSLK True PC9_epitope_Rep2 1315.62959692739 1315.6284899358602 71.009 2 0.10504836997036264 0.002397291061100956 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 70409 23815 LYQILQGIVF True PC9_epitope_Rep1 1192.6855956818797 1192.68448993586 96.401 2 0.10504821055780354 0.002397291061100956 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 77641 9879 NYYEQWGK True PC9_epitope_Rep6 1086.47705946762 1086.4759699358601 48.494 2 0.10504166537131901 0.002397291061100956 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 30261 7722 GAAKDLPGV True PC9_epitope_Rep2 826.4548674710599 826.45376993586 35.079 2 0.10504010262378 0.002397291061100956 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 33399 19001 GLFIIDDK True PC9_epitope_Rep3 919.5014833103099 919.50038993586 78.308 2 0.10503982218587543 0.002397291061100956 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 47250 19076 IYEIIDNSQGF True PC9_epitope_Rep6 1297.6190322436898 1297.61792993586 86.021 2 0.10503958526537946 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 35405 12911 GTDELRLLY True H1975_Epitope_Rep3 1078.56587447202 1078.56537496793 54.89 1 0.10503931595738558 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 131783 6247 VYAHIYHQHF True NCI_RA007_Epitope_Rep4 1313.6305404172501 1313.62888490379 30.635 3 0.10503690403345978 0.002397291061100956 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A', 'ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 35053 19777 GRDLTDYLM True PC9_epitope_Rep5 1082.50664534374 1082.50554993586 81.117 2 0.10503014492868017 0.002397291061100956 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 125969 10115 VPAGGAVAV True PC9_epitope_Rep5 739.42283906679 739.42229496793 43.892 1 0.10501925831863672 0.002397291061100956 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 75297 19219 NPTLILAA True PC9_epitope_Rep2 811.4803539429099 811.47980496793 79.298 1 0.10501857434102918 0.002397291061100956 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 11875 10340 DHNVSSVAI True PC9_epitope_Rep3 940.46140940348 940.46030993586 44.717 2 0.1050092617615848 0.002397291061100956 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 39394 17167 HLVPEVPTV True PC9_epitope_Rep5 989.55458151233 989.55348993586 71.053 2 0.10500906424766127 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 27104 20627 FLQEGDLISA True PC9_epitope_Rep5 1091.54989005471 1091.5487899358602 84.392 2 0.1050068122590875 0.002397291061100956 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 127141 5504 VQDNPRAL True PC9_epitope_Rep1 911.4824792012299 911.48138993586 26.001 2 0.10500420853611737 0.002397291061100956 0.9438714419765777 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89', 'KLHL24-CEP89|1|fusion'] 108361 5134 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 24.852 2 0.10500324972719982 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 132088 8271 VYIKHPVSL True PC9_epitope_Rep6 1054.61751612206 1054.61640993586 41.42 2 0.10500258734222977 0.002397291061100956 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 96253 8907 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 39.26 1 0.10500157590197814 0.002397291061100956 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 83749 11838 QEDKPSPLLF True H1975_Epitope_Rep1 1172.607739284 1172.60664993586 50.532 2 0.10499554699421872 0.002397291061100956 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1'] 2458 9669 AEQNIIPSA True H1975_Epitope_Rep3 941.4818104948899 941.48070993586 42.211 2 0.10498779530054025 0.002397291061100956 0.9438714419765777 ['ENSG00000183508|ENST00000369448|TENT5C'] 9573 11810 AYAPPPHVI True PC9_epitope_Rep5 963.5178020807899 963.51670993586 50.423 2 0.10498730101897273 0.002397291061100956 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 133205 16324 WEALVSPVV True H1975_Epitope_Rep2 998.54368247546 998.5431349679301 68.008 1 0.10498191297494779 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 1092 7649 AEAPPAYTP True H1975_Epitope_Rep2 915.4337976733101 915.43270993586 34.375 2 0.1049766783034898 0.002397291061100956 0.9438714419765777 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 113432 19628 TQNDIISTL True PC9_epitope_Rep5 1003.51858992643 1003.51748993586 80.551 2 0.10495812010249796 0.002397291061100956 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 73747 8617 NHANGLTL True PC9_epitope_Rep5 838.4297153523801 838.42860993586 38.088 2 0.10495712591232467 0.002397291061100956 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 31892 5815 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 27.391 1 0.10495289498944738 0.002397291061100956 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 17780 14512 EHVLTTVTL True PC9_epitope_Rep4 1011.56006081559 1011.55896993586 63.734 2 0.10493310437620657 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 92142 8653 RQAPIPAEL True NCI_RA007_Epitope_Rep4 993.5607295219298 993.55962993586 40.067 2 0.1049262850385531 0.002397291061100956 0.9438714419765777 ['ENSG00000169583|ENST00000494426|CLIC3'] 96417 11039 SEIDQVVPAA True H1975_Epitope_Rep2 1027.5185899264297 1027.51748993586 47.491 2 0.10492422066680286 0.002397291061100956 0.9438714419765777 ['ENSG00000162607|ENST00000339950|USP1'] 72529 23162 MVDGTLLLL True PC9_epitope_Rep3 973.5518046310099 973.55070993586 94.363 2 0.10492376057683034 0.002397291061100956 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 14052 8451 DSDGAQDYY True H1975_Epitope_Rep2 1032.3672342351201 1032.3666749679298 37.459 1 0.10492106570467243 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000562988.5_1_16:2052496-2059683:-|nuORF', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 25563 8954 FESIIKEAA True H1975_Epitope_Rep2 1006.5335117145798 1006.53240993586 39.395 2 0.10490900240589575 0.002397291061100956 0.9438714419765777 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5', 'chrX:135885350-135888848|170|110.96|0.05|11.14|-|ENST00000611668|CT45A10,CT45A10', 'chrX:135881315-135882536|241|118.07|1.0|6.88|-|ENST00000617981|CT45A10,CT45A10', 'chrX:135781735-135785220|228|373.1|0.31|10.21|-|ENST00000487941|CT45A5,CT45A5', 'chrX:135779641-135781561|228|103.74|0.53|7.61|-|ENST00000617203|CT45A5,CT45A5'] 83693 10745 QEALSALTA True H1975_Epitope_Rep3 902.4709114580199 902.46980993586 46.41 2 0.1049079260100417 0.002397291061100956 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 66588 7410 LSSPATLNSR True PC9_epitope_Rep1 1044.5563724174801 1044.55526993586 33.316 2 0.10490521224684213 0.002397291061100956 0.9438714419765777 ['CON__P00761'] 123788 12512 VITEKGISDL True PC9_epitope_Rep4 1073.5968402471299 1073.59574993586 55.946 2 0.10489393262901822 0.002397291061100956 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 27661 10022 FQDDPHAGL True PC9_epitope_Rep5 998.4457593393398 998.44466993586 43.529 2 0.1048896847404123 0.002397291061100956 0.9438714419765777 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 96460 7633 SEIQGLRTV True NCI_RA007_Epitope_Rep5 1001.55055876105 1001.54946993586 36.063 2 0.1048852419776439 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF', 'ENST00000381017.6_1_9:13106966-13119674:-|nuORF'] 36416 14530 GVIDLVFEK True NCI_RA007_Epitope_Rep4 1018.5698972233 1018.56880993586 63.263 2 0.10488435914635941 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 64791 15988 LRVGEPVAL True PC9_epitope_Rep3 952.5705659296398 952.56946993586 66.642 2 0.1048789985561088 0.002397291061100956 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 47385 14823 IYIGGQEHF True PC9_epitope_Rep3 1062.5134449763398 1062.5123499358601 62.153 2 0.10487811331317257 0.002397291061100956 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 48366 8480 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54861496793 37.57 1 0.10487483822612159 0.002397291061100956 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 130434 17407 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 71.756 2 0.10487130454031482 0.002397291061100956 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 140339 18380 YYEHEFVEL True PC9_epitope_Rep2 1227.5448046742697 1227.54370993586 76.03 2 0.10486776418797321 0.002397291061100956 0.9438714419765777 ['ATP9B|p.T1064Rfs*5|1|0.1|ENSG00000166377|chr18:79374017-79374017|A/-|frameshift_variant', 'nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 5496 18794 AM[Oxidation]SSKFFLV True PC9_epitope_Rep1 1044.53140392004 1044.53030993586 77.077 2 0.10485890299169279 0.002397291061100956 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 86773 21205 QRMDILDVL True PC9_epitope_Rep2 1101.5852300176098 1101.5841299358601 87.023 2 0.10485648965708932 0.002397291061100956 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2', 'ENST00000564507.5_1_16:1551718-1556512:+|nuORF'] 8095 13075 ATELQSMMY True H1975_Epitope_Rep2 1072.45691827 1072.4563749679298 55.416 1 0.10485609580867658 0.002397291061100956 0.9438714419765777 ['ENSG00000196284|ENST00000371459|SUPT3H'] 113704 10805 TRDETNYGIP True PC9_epitope_Rep2 1164.5411162761598 1164.54000993586 46.877 2 0.10485413274044944 0.002397291061100956 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 3858 10034 AHAVGNVEL True PC9_epitope_Rep1 908.4715801643599 908.47048993586 43.464 2 0.10485308659476283 0.002397291061100956 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ARHGAP15-KYNU|2|fusion', 'ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU', 'KYNU|p.F306Lfs*17|1|0.1|ENSG00000115919|chr2:143029640-143029640|T/-|frameshift_variant', 'KYNU-ARHGAP15|1|fusion'] 77285 18981 NYISGIQTI True PC9_epitope_Rep4 1007.52876068731 1007.52817496793 81.102 1 0.10484868410170153 0.002397291061100956 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 90853 10599 RKVYSILSL True NCI_RA007_Epitope_Rep5 1077.65462990677 1077.6535299358602 47.405 2 0.10483342945109043 0.002397291061100956 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 31948 12112 GESDDSILRLA True H1975_Epitope_Rep3 1174.58298108814 1174.58188993586 51.754 2 0.1048241864188175 0.002397291061100956 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21', 'ENST00000370562.1_1_20:60963217-60963421:+|nuORF'] 33715 7080 GLQVVAVK True NCI_RA007_Epitope_Rep1 812.5119884243599 812.51088993586 31.533 2 0.10481939612493403 0.002397291061100956 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000447985.1_1_21:30260216-30260456:-|nuORF', 'ENSG00000083457|ENST00000263087|ITGAE'] 75451 7687 NQIDHEVTV True PC9_epitope_Rep6 1053.50908787189 1053.50798993586 38.896 2 0.10481461880781685 0.002397291061100956 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 86101 11618 QPQPQPYAV True PC9_epitope_Rep1 1026.5134449763398 1026.5123499358601 49.566 2 0.10480414569425564 0.002397291061100956 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 73865 18541 NHFPGSFQI True PC9_epitope_Rep5 1045.49812926537 1045.4970299358602 76.34 2 0.10480377329429108 0.002397291061100956 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 25234 15525 FEDDAIQLV True H1975_Epitope_Rep2 1048.50769088956 1048.5065899358601 64.872 2 0.10479901631129386 0.002397291061100956 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 3077 9993 AGAGHFEVV True PC9_epitope_Rep2 885.43446637965 885.43336993586 43.766 2 0.10477924152276463 0.002397291061100956 0.9438714419765777 ['ENSG00000169018|ENST00000306917|FEM1B', 'FEM1B|p.C308Lfs*2|1|0.33|ENSG00000169018|chr15:68290279-68290280|-/T|frameshift_variant'] 105166 6062 STMSTNGIPR True NCI_RA007_Epitope_Rep1 1062.51279335334 1062.5116899358602 27.619 2 0.10477472443542375 0.002397291061100956 0.9438714419765777 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF', 'ENST00000453527.6_1_8:11710176-11718921:-|nuORF', 'ENST00000534510.5_1_8:11710176-11715376:-|nuORF', 'ENST00000532370.1_1_8:11710176-11711001:-|nuORF', 'ENST00000530296.5_1_8:11710176-11726410:-|nuORF', 'ENST00000527243.5_1_8:11710176-11719899:-|nuORF', 'ENST00000345125.7_1_8:11710176-11718921:-|nuORF', 'ENST00000534636.5_1_8:11710176-11725551:-|nuORF', 'ENST00000353047.10_1_8:11710176-11725594:-|nuORF', 'ENST00000531089.5_1_8:11710176-11725551:-|nuORF'] 11469 21579 DGAGFLINLID True H1975_Epitope_Rep3 1146.5920892198599 1146.59098993586 90.168 2 0.10477299530196339 0.002397291061100956 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 35022 16193 GRAPQVLVL True PC9_epitope_Rep3 951.5865503469499 951.58544993586 67.426 2 0.1047672730419385 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 34927 18274 GQWGRAWEV True PC9_epitope_Rep3 1087.51992733911 1087.5188299358601 75.498 2 0.10476621614489132 0.002397291061100956 0.9438714419765777 ['ENSG00000172893|ENST00000355527|DHCR7'] 98548 19142 SILSEVQQA True PC9_epitope_Rep3 973.50802524273 973.50692993586 78.849 2 0.1047633455437761 0.002397291061100956 0.9438714419765777 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 45856 11357 ISQIVSSITAS True H1975_Epitope_Rep3 1104.60265390356 1104.60154993586 48.796 2 0.10476104429408044 0.002397291061100956 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 72919 16917 NAYTGIVLL True H1975_Epitope_Rep2 962.54368247546 962.54258993586 70.318 2 0.10476005652199102 0.002397291061100956 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 32287 11776 GFSLEELR True NCI_RA007_Epitope_Rep5 949.4868958753299 949.48578993586 51.955 2 0.10475815683674541 0.002397291061100956 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF', 'ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 104624 9829 SSVPGVRLLQ True NCI_RA007_Epitope_Rep3 1054.61349337078 1054.6123899358602 45.736 2 0.10475799048036878 0.002397291061100956 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 115575 8399 TVIAKVNNV True PC9_epitope_Rep5 956.5654805492 956.5649349679301 37.25 1 0.1047518297035004 0.002397291061100956 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 108903 6928 TESQALVSA True H1975_Epitope_Rep2 904.4501760134399 904.44906993586 31.569 2 0.10474576751691571 0.002397291061100956 0.9438714419765777 ['ENST00000487995.1_1_1:212957698-212965105:-|nuORF', 'nc|ENSG00000117697|Q96IY1-2|NSL1', 'ENSG00000117697|ENST00000366977|NSL1'] 13445 5318 DNTNEIYSGK True NCI_RA007_Epitope_Rep2 1139.50948179471 1139.5083899358601 25.307 2 0.1047376347566316 0.002397291061100956 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 8634 15828 AVANIVNSV True PC9_epitope_Rep2 885.49198125577 885.49088993586 66.141 2 0.10473660728007587 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 75040 12192 NM[Oxidation]DNMFESY True H1975_Epitope_Rep3 1165.40561135357 1165.40507496793 52.068 1 0.10473447506583236 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 57120 12848 LEEPFHITC True H1975_Epitope_Rep2 1087.5008316873102 1087.4997299358602 54.53 2 0.10472860318427073 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000113597|A5PLN9-2|TRAPPC13', 'nc|ENSG00000113597|A5PLN9-4|TRAPPC13', 'ENSG00000113597|ENST00000399438|TRAPPC13', 'nc|ENSG00000113597|A5PLN9-5|TRAPPC13'] 87481 4899 QTETKTITY True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 23.927 2 0.10471610422816915 0.002397291061100956 0.9438714419765777 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF', 'EPB41L3|p.H979Q|1|0.29|ENSG00000082397|chr18:5396237-5396237|G/T|missense_variant'] 72209 8268 MRSPQMVSA True PC9_epitope_Rep5 1005.47357139365 1005.47246993586 36.744 2 0.1047158390492274 0.002397291061100956 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 38598 10160 HHIGDRSLSL True PC9_epitope_Rep1 1133.59415490853 1133.5924949037899 43.956 3 0.10471496386681685 0.002397291061100956 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF'] 116839 12458 TYMKDLYQL True NCI_RA007_Epitope_Rep4 1173.5739966275698 1173.57288993586 54.928 2 0.10471392296275275 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 31942 7693 GESAEVLSA True H1975_Epitope_Rep3 861.40797684829 861.4074249679301 34.572 1 0.10470935604738744 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 6652 9443 AQAEVYKEL True PC9_epitope_Rep4 1049.53932537101 1049.53822993586 43.934 2 0.10470929374976574 0.002397291061100956 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 60680 16529 LIVKEWNSV True PC9_epitope_Rep1 1086.60734536118 1086.6062499358602 68.402 2 0.10469766729116332 0.002397291061100956 0.9438714419765777 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 135135 18772 YAQGLLTGV True PC9_epitope_Rep4 920.4967322830399 920.49618496793 80.289 1 0.10469653196582844 0.002397291061100956 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 104969 18729 STIAILNSV True PC9_epitope_Rep6 916.5229470308801 916.52184993586 84.682 2 0.10469545058870702 0.002397291061100956 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 134938 12252 YAEVGRVL True PC9_epitope_Rep1 905.4970666362099 905.49596993586 51.987 2 0.10468797683672662 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 56879 12137 LEDLPTVEA True H1975_Epitope_Rep3 985.49679185269 985.49624496793 51.853 1 0.10468184114086107 0.002397291061100956 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 17314 11336 EHDPQYAVI True PC9_epitope_Rep4 1070.50327421546 1070.5021699358601 51.382 2 0.1046728429854381 0.002397291061100956 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 115749 19411 TVLNVEGDAL True PC9_epitope_Rep2 1029.5342399905699 1029.5331499358601 80.043 2 0.10466179235162033 0.002397291061100956 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5'] 65995 10590 LSLTPEQWKS True NCI_RA007_Epitope_Rep3 1187.6186383208699 1187.61754993586 48.706 2 0.10465843509392413 0.002397291061100956 0.9438714419765777 ['HMCN1-IGLL5|1|fusion', 'nc|ENSG00000222037|P0CF74|IGLC6', 'nc|ENSG00000211685|A0M8Q6|IGLC7', 'nc|ENSG00000211679|P0DOY3|IGLC3', 'nc|ENSG00000211677|P0DOY2|IGLC2', 'nc|ENSG00000211675|P0CG04|IGLC1', 'nc|ENSG00000254709|B9A064|IGLL5'] 11751 14941 DHIAHIIEL True PC9_epitope_Rep4 1059.57129420563 1059.57018993586 65.411 2 0.10464995419726542 0.002397291061100956 0.9438714419765777 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 104287 14581 SSEELPLYY True H1975_Epitope_Rep1 1099.5073565363898 1099.50677496793 61.293 1 0.10464881897396985 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 86108 11753 QPQPQPYAV True PC9_epitope_Rep3 1026.5134449763398 1026.5123499358601 50.225 2 0.10464585069780878 0.002397291061100956 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 103108 13781 SQLPPLREI True PC9_epitope_Rep6 1051.60259433391 1051.6014899358602 64.81 2 0.1046445857477449 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 88408 18373 QYQKVPVLF True PC9_epitope_Rep2 1120.6280808057597 1120.6269899358601 76.001 2 0.10463925562617495 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 95578 5255 SASGPLHSV True PC9_epitope_Rep4 853.4293809992101 853.42828993586 26.912 2 0.10463572456450902 0.002397291061100956 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 87619 9417 QTVAVGVIK True PC9_epitope_Rep3 913.5596668927699 913.55856993586 41.159 2 0.10463359848368256 0.002397291061100956 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 67251 12951 LTDLVPNTEY True H1975_Epitope_Rep1 1163.57101942211 1163.5704749679298 54.892 1 0.1046334338998525 0.002397291061100956 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 48478 12190 KEETPLFLAA True H1975_Epitope_Rep2 1117.60192562757 1117.60082993586 51.97 2 0.1046310549261914 0.002397291061100956 0.9438714419765777 ['ENSG00000134250|ENST00000256646|NOTCH2', 'ENSG00000074181|ENST00000263388|NOTCH3'] 56903 9301 LEDPTEVTP True H1975_Epitope_Rep1 999.47605640811 999.47494993586 40.684 2 0.10463088866216619 0.002397291061100956 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'ENSG00000226650|ENST00000435029|KIF4B'] 76823 17010 NVFDEAVRV True PC9_epitope_Rep4 1047.53490869691 1047.53380993586 73.422 2 0.10462739947610686 0.002397291061100956 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1', 'ENST00000475867.5_1_10:5963439-5965826:+|nuORF'] 70745 17146 MEALPLLAA True H1975_Epitope_Rep3 927.5099398190299 927.50939496793 71.584 1 0.10462690877292563 0.002397291061100956 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 76450 7016 NTAQGFRTV True PC9_epitope_Rep1 992.5039429218 992.50284993586 31.793 2 0.10462566645263387 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 96073 5882 SEDEADVAP True H1975_Epitope_Rep2 931.3770706428298 931.3765249679301 27.611 1 0.10462566026248381 0.002397291061100956 0.9438714419765777 ['ENST00000444428.5_3_7:1040118-1094922:-|nuORF', 'ENST00000412051.5_2_7:1040118-1067924:-|nuORF'] 17262 16066 EHASSLLEL True PC9_epitope_Rep4 997.5080252427299 997.50692993586 69.732 2 0.10462060620915603 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 34704 12084 GQMGSFIRL True NCI_RA007_Epitope_Rep3 1007.5222358382299 1007.52112993586 54.651 2 0.1046199933949228 0.002397291061100956 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 84926 9587 QHTPTSITL True PC9_epitope_Rep6 996.52400966004 996.52290993586 47.183 2 0.10461227483215735 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'SETD5|p.K832Rfs*8|1|0.2|ENSG00000168137|chr3:9464441-9464441|A/-|frameshift_variant', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF'] 68978 11355 LVGIISSR True PC9_epitope_Rep3 843.51780208079 843.51670993586 48.681 2 0.10460731015196605 0.002397291061100956 0.9438714419765777 ['ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 107076 17632 SYLTSASSL True PC9_epitope_Rep1 927.45492704071 927.4543749679301 72.614 1 0.10460408519788332 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 64190 18522 LQIAGLEHL True PC9_epitope_Rep4 992.5654805492 992.56438993586 79.318 2 0.10459835172179158 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 91644 12366 RPFQGTMGV True PC9_epitope_Rep3 991.4909357099498 991.48982993586 52.596 2 0.10459816361499405 0.002397291061100956 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 113441 16068 TQNPNYYNL True PC9_epitope_Rep3 1125.5090878718902 1125.50798993586 66.955 2 0.1045975054054641 0.002397291061100956 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 41968 6172 IEDEVTRQV True H1975_Epitope_Rep3 1087.55095268387 1087.54984993586 28.751 2 0.10459676637494232 0.002397291061100956 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 14850 12802 DYFEEYGK True PC9_epitope_Rep4 1049.4341915961297 1049.4330899358602 57.103 2 0.10459373625878167 0.002397291061100956 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 23314 5926 EVSSATNALR True PC9_epitope_Rep5 1046.5356369729 1046.53452993586 27.789 2 0.10458944926312792 0.002397291061100956 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF'] 40655 18236 HTILDLPAV True PC9_epitope_Rep6 977.55458151233 977.55348993586 82.786 2 0.10458655916343233 0.002397291061100956 0.9438714419765777 ['ENST00000274496.9_1_5:143539764-143539935:-|nuORF'] 73263 7151 NEIDTTPPP True H1975_Epitope_Rep3 982.46074069714 982.4601949679301 32.478 1 0.1045856522272291 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 106656 19108 SYADQMFLL True NCI_RA007_Epitope_Rep5 1086.50558271458 1086.5044899358602 80.37 2 0.1045757406186895 0.002397291061100956 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 73787 15068 NHDSRLWSL True PC9_epitope_Rep1 1126.55195574338 1126.5503249037902 62.778 3 0.10457192056151973 0.002397291061100956 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 131516 20940 VVVGDLVEV True PC9_epitope_Rep1 927.5276980581499 927.52660993586 85.366 2 0.10456924629577881 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 34669 23303 GQLDFSEFL True PC9_epitope_Rep5 1054.49712620586 1054.49657496793 94.615 1 0.10455966937223078 0.002397291061100956 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 129338 14535 VTDTGALYLY True H1975_Epitope_Rep2 1114.55464108198 1114.55354993586 61.066 2 0.10454518175468873 0.002397291061100956 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 9821 15894 AYLKAIVLF True NCI_RA007_Epitope_Rep4 1036.6321035570397 1036.6310099358602 69.008 2 0.1045420464658813 0.002397291061100956 0.9438714419765777 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 649 6666 AATKVTTVL True H1975_Epitope_Rep2 902.54368247546 902.54258993586 30.549 2 0.10454154547827516 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 84224 5479 QEVAQVASA True H1975_Epitope_Rep2 901.4505103666098 901.44940993586 26.09 2 0.10453391478701302 0.002397291061100956 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 73011 9508 NDEELNKLLGK True NCI_RA007_Epitope_Rep5 1271.6721304457099 1271.67049490379 43.205 3 0.10452854687854742 0.002397291061100956 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 57173 5280 LEERYVPRA True H1975_Epitope_Rep2 1131.6036569630699 1131.6020249037902 25.37 3 0.1045278010726548 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 98262 7726 SIFDGRVVAK True NCI_RA007_Epitope_Rep5 1090.61349337078 1090.6123899358602 36.418 2 0.10452347055308665 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 113263 22129 TQFADMISL True PC9_epitope_Rep5 1024.4899326504399 1024.4888299358602 90.154 2 0.10451800716026521 0.002397291061100956 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 9410 8220 AVVIVDDR True PC9_epitope_Rep3 885.4919812557699 885.49088993586 36.597 2 0.10451792645961464 0.002397291061100956 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 32709 8799 GHSGPITSI True PC9_epitope_Rep1 867.4450310633501 867.44392993586 38.687 2 0.10451615562567604 0.002397291061100956 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF', 'PRPF19|p.F388L|1|0.17|ENSG00000110107|chr11:60898250-60898250|A/G|missense_variant'] 86052 19081 QPLPVILHV True PC9_epitope_Rep4 1014.6226015025001 1014.62150993586 81.485 2 0.1045146439370872 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ATF7IP|p.S777C|1|0.33|ENSG00000171681|chr12:14460666-14460666|C/G|missense_variant'] 107708 17115 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.57388993586 71.081 2 0.1045094299876899 0.002397291061100956 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 49114 7440 KGDVDISLPK True NCI_RA007_Epitope_Rep2 1070.5971746003 1070.5960699358602 33.566 2 0.10450799687296856 0.002397291061100956 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 18396 12951 EKDFYLYY True H1975_Epitope_Rep2 1139.51752729727 1139.51642993586 54.932 2 0.10450736593019962 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 36049 9893 GVDVTGPHLY True H1975_Epitope_Rep1 1056.52400966004 1056.52290993586 42.987 2 0.1045071592579357 0.002397291061100956 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 65365 10189 LSEPSSLQY True H1975_Epitope_Rep1 1022.49204082542 1022.49147496793 44.132 1 0.10450142680490955 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 87655 5993 QVASTLKQV True PC9_epitope_Rep2 972.5603951687598 972.55928993586 28.44 2 0.1045001141483466 0.002397291061100956 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 127230 20165 VQIGDIVTV True PC9_epitope_Rep4 942.5385970950199 942.53750993586 85.701 2 0.10449642180660532 0.002397291061100956 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 25929 9096 FGPGVAFR True H1975_Epitope_Rep1 849.4497225209699 849.44862993586 39.892 2 0.10449291744188066 0.002397291061100956 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 24172 12520 EYTLMRATF True NCI_RA007_Epitope_Rep4 1130.5430308524599 1130.54192993586 55.176 2 0.10449052056720946 0.002397291061100956 0.9438714419765777 ['ENSG00000185950|ENST00000375856|IRS2'] 110858 18747 TLAAHLPAEF True PC9_epitope_Rep1 1068.56039516876 1068.55928993586 76.898 2 0.10448957815980091 0.002397291061100956 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 18773 9227 ELDPTNM[Oxidation]TY True H1975_Epitope_Rep2 1098.45394144498 1098.45284993586 40.445 2 0.10448943810327214 0.002397291061100956 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 129223 8919 VTDLAGNEY True H1975_Epitope_Rep3 980.4450906330001 980.44454496793 39.307 1 0.1044858550293999 0.002397291061100956 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 72675 23994 MYIDPDLLAEL True PC9_epitope_Rep1 1291.6369908069498 1291.6358899358602 97.1 2 0.10448108049531342 0.002397291061100956 0.9438714419765777 ['ENSG00000104611|ENST00000265807|SH2D4A'] 95581 6529 SASGPLHSV True PC9_epitope_Rep5 853.4293809992101 853.42828993586 30.086 2 0.10446469129701635 0.002397291061100956 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 31747 4710 GELEAVKQA True NCI_RA007_Epitope_Rep3 943.49746055903 943.49636993586 25.473 2 0.10446401432640895 0.002397291061100956 0.9438714419765777 ['SPAG9|p.M1269Ifs*14|1|0.25|ENSG00000008294|chr17:50970743-50970750|TGACAAGC/-|frameshift_variant', 'ENST00000514613.5_1_17:49067015-49156972:-|nuORF', 'nc|ENSG00000008294|O60271-5|SPAG9', 'nc|ENSG00000008294|O60271-3|SPAG9', 'nc|ENSG00000008294|O60271-9|SPAG9', 'nc|ENSG00000008294|O60271-4|SPAG9', 'nc|ENSG00000008294|O60271-2|SPAG9', 'ENSG00000008294|ENST00000262013|SPAG9'] 17170 13265 EHAEALLL True PC9_epitope_Rep6 894.4810822188999 894.47998993586 62.675 2 0.10446100331781195 0.002397291061100956 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 86307 12376 QQGPVGVNV True PC9_epitope_Rep5 896.4715801643599 896.47048993586 52.601 2 0.10445874080829166 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 8479 3568 ATTTVMNPK True NCI_RA007_Epitope_Rep4 961.4902670036099 961.48916993586 19.746 2 0.10445531069630073 0.002397291061100956 0.9438714419765777 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46306285-46312915:-|nuORF', 'ENST00000475170.5_1_21:46306285-46313576:-|nuORF', 'ENST00000479202.5_1_21:46306285-46309037:-|nuORF'] 41216 9218 IADPNIAKL True H1975_Epitope_Rep3 953.55458151233 953.55348993586 40.449 2 0.10445472641745304 0.002397291061100956 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 120166 18609 VFLENVIR True PC9_epitope_Rep3 988.5705659296399 988.56946993586 76.801 2 0.10445276178891015 0.002397291061100956 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C2|p.A70S|1|0.12|ENSG00000278705|chr6:26027045-26027045|C/A|missense_variant'] 86807 11383 QRNPQGFVL True PC9_epitope_Rep6 1057.5668775315298 1057.56578993586 54.834 2 0.10444593788265352 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 108518 14272 TEFPGVVV True H1975_Epitope_Rep2 846.4487194614599 846.4481749679301 60.048 1 0.10444293970407029 0.002397291061100956 0.9438714419765777 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 34817 11075 GQVDMDIKL True NCI_RA007_Epitope_Rep3 1017.51648175145 1017.51538993586 50.664 2 0.10443745791625532 0.002397291061100956 0.9438714419765777 ['ENSG00000129250|ENST00000320785|KIF1C'] 25524 5001 FEQEM[Oxidation]ATAA True NCI_RA007_Epitope_Rep5 1012.4171620134398 1012.41606993586 25.941 2 0.104437054226394 0.002397291061100956 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 107770 21633 TAMDVVYAL True PC9_epitope_Rep5 981.4841189940099 981.48357496793 88.254 1 0.10443375952990414 0.002397291061100956 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 44617 11581 IPHSLPGAVAA True PC9_epitope_Rep4 1031.5763795860698 1031.5752899358602 52.306 2 0.10441480302023184 0.002397291061100956 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 103915 17283 SRMPGELVL True PC9_epitope_Rep1 1000.5375515491999 1000.53644993586 71.296 2 0.10441414534453321 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 2708 8526 AETLAPVQA True H1975_Epitope_Rep2 898.47599683846 898.47544496793 37.751 1 0.10440861680411741 0.002397291061100956 0.9438714419765777 ['ENSG00000018408|ENST00000360632|WWTR1', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 98509 16344 SILFVPTSAPR True PC9_epitope_Rep6 1186.6710082468999 1186.66990993586 75.241 2 0.10440780480393597 0.002397291061100956 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 91858 8544 RPNPPPVSV True PC9_epitope_Rep3 961.53451477409 961.53340993586 37.82 2 0.10440692802053692 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 113883 8545 TRHPENWTL True PC9_epitope_Rep2 1152.56760580752 1152.56596490379 38.23 3 0.10439787071618736 0.002397291061100956 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 67285 5792 LTDPDGALAK True H1975_Epitope_Rep2 999.5236753068699 999.52256993586 27.273 2 0.10439753743580171 0.002397291061100956 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 74383 18832 NITDKGIIAL True PC9_epitope_Rep3 1056.6179100448799 1056.6168099358601 77.66 2 0.10439095851906938 0.002397291061100956 0.9438714419765777 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 48181 20449 KAVELLVEL True PC9_epitope_Rep5 1012.6168474157198 1012.61574993586 83.693 2 0.10438915103039002 0.002397291061100956 0.9438714419765777 ['ENSG00000100554|ENST00000216442|ATP6V1D'] 7988 11567 ATDNLISDTSY True H1975_Epitope_Rep2 1198.53536218938 1198.53426993586 49.556 2 0.10438721640112647 0.002397291061100956 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 123323 12860 VHTIVNETL True PC9_epitope_Rep5 1024.55530978832 1024.5542099358602 54.475 2 0.10437715713666197 0.002397291061100956 0.9438714419765777 ['ENSG00000023516|ENST00000025301|AKAP11', 'AKAP11|p.S1150Rfs*7|1|0.23|ENSG00000023516|chr13:42302192-42302195|TGTC/-|frameshift_variant'] 38493 4781 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 23.76 2 0.1043704087968078 0.002397291061100956 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 119938 9973 VEYEVPEA True H1975_Epitope_Rep2 934.4283779396998 934.4278249679301 43.35 1 0.10436897201260202 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 72267 14769 MSDLNVPEQLY True H1975_Epitope_Rep2 1307.6067533078299 1307.6056499358601 61.967 2 0.10436753241503768 0.002397291061100956 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 133328 15900 WESEPHPYVFF True H1975_Epitope_Rep3 1436.6401020414398 1436.63900993586 66.608 2 0.10436745057537179 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 74432 12297 NIVPVIAKA True PC9_epitope_Rep4 923.5804023373499 923.57930993586 55.114 2 0.1043669771545251 0.002397291061100956 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 53721 15578 KYEELFPAF True NCI_RA007_Epitope_Rep2 1142.5648118428596 1142.56370993586 65.305 2 0.10436378236258992 0.002397291061100956 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 115234 7569 TVDARVYSY True H1975_Epitope_Rep1 1072.5189242796 1072.5178299358602 34.105 2 0.10436260358575908 0.002397291061100956 0.9438714419765777 ['ENST00000378952.7_1_10:12209703-12222485:-|nuORF', 'ENSG00000165609|ENST00000491614|NUDT5'] 102722 16769 SQDTSFTTL True PC9_epitope_Rep5 998.4556553167 998.45454993586 69.506 2 0.10436104129157348 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 78183 8850 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 38.882 2 0.1043597191415664 0.002397291061100956 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 97994 14177 SHSPPLLQV True PC9_epitope_Rep1 976.53418042092 976.53308993586 59.354 2 0.1043591354770594 0.002397291061100956 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 54486 6665 LAAARLAAA True PC9_epitope_Rep6 826.5024863698198 826.50138993586 34.377 2 0.10435015167067233 0.002397291061100956 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 75030 11006 NMDNM[Oxidation]FESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 47.363 2 0.10433886338421 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 86288 11762 QQDSGRLYL True PC9_epitope_Rep5 1078.5407223533398 1078.5396299358601 50.24 2 0.10433847566602979 0.002397291061100956 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2', 'ENST00000520536.1_1_8:22475798-22477192:+|nuORF', 'ENST00000521436.5_1_8:22475932-22477192:+|nuORF'] 17316 12613 EHDPQYAVI True PC9_epitope_Rep5 1070.50327421546 1070.5021699358601 53.518 2 0.10433238874312556 0.002397291061100956 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 8923 21138 AVGLAVLNV True PC9_epitope_Rep4 854.52255310806 854.52144993586 89.469 2 0.10432701455481898 0.002397291061100956 0.9438714419765777 ['ENSG00000175309|ENST00000308158|PHYKPL', 'nc|ENSG00000175309|Q8IUZ5-3|PHYKPL', 'ENST00000481811.5_1_5:177638924-177642644:-|nuORF', 'ENST00000493197.5_1_5:177638946-177656967:-|nuORF'] 29625 21954 FVLPELPSV True PC9_epitope_Rep4 999.56408356687 999.5635749679301 92.658 1 0.10432138029273473 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 110103 6660 TIAPALVSK True NCI_RA007_Epitope_Rep5 898.5487678559 898.54766993586 32.287 2 0.1043164195115161 0.002397291061100956 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 87583 12459 QTPQRLLEV True PC9_epitope_Rep4 1082.6084079903399 1082.60730993586 55.731 2 0.1043155126719827 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 48354 8035 KEAEELLPA True H1975_Epitope_Rep2 998.5284263341398 998.5273299358599 35.856 2 0.10430783370145151 0.002397291061100956 0.9438714419765777 ['ENSG00000135476|ENST00000257934|ESPL1', 'ESPL1|p.E1511Kfs*24|1|0.2|ENSG00000135476|chr12:53288323-53288323|G/-|frameshift_variant'] 61964 11170 LLLPGELAK True H1975_Epitope_Rep1 952.5957180483199 952.59462993586 47.933 2 0.10429837047542831 0.002397291061100956 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 713 13765 AAVLEQTQL True PC9_epitope_Rep6 971.5287606873098 971.52766993586 64.746 2 0.10429138979942988 0.002397291061100956 0.9438714419765777 ['ENST00000517198.2_22:34100813-34100885:-|nuORF'] 11600 11072 DHADSNIVI True PC9_epitope_Rep4 982.47197408718 982.47086993586 50.366 2 0.10429007251106291 0.002397291061100956 0.9438714419765777 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B'] 76287 13389 NSDPNLHLL True PC9_epitope_Rep6 1021.5192586327701 1021.51816993586 63.171 2 0.1042898832192347 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 46521 6835 ITQGTPLKY True H1975_Epitope_Rep2 1019.5651461960299 1019.56404993586 31.207 2 0.10428983099617936 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.D1460N|1|0.44|ENSG00000196498|chr12:124344933-124344933|C/T|missense_variant'] 102798 8634 SQFGTEHVL True NCI_RA007_Epitope_Rep4 1016.4927095317599 1016.49160993586 39.994 2 0.1042867651477302 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 138162 9853 YQNENEVGV True PC9_epitope_Rep3 1050.4618033262998 1050.4607099358602 42.859 2 0.10428629384314209 0.002397291061100956 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 1832 12217 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.4856749679301 52.075 1 0.1042854746431144 0.002397291061100956 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 90004 14263 RGDLPFVVPR True PC9_epitope_Rep2 1154.6560268890998 1154.65492993586 60.128 2 0.1042829379165534 0.002397291061100956 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 116904 14327 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47054993586 60.372 2 0.10426902819299944 0.002397291061100956 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 64015 5791 LQDAEIAR True PC9_epitope_Rep1 914.4821448480599 914.48104993586 27.092 2 0.10426464026491919 0.002397291061100956 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 47665 24194 IYPPLLGALSF True PC9_epitope_Rep1 1189.6746966450098 1189.67358993586 97.877 2 0.10426453428547516 0.002397291061100956 0.9438714419765777 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 136671 9968 YIDSKFEDY True H1975_Epitope_Rep2 1178.5131701928199 1178.5120699358602 43.333 2 0.10425571370426483 0.002397291061100956 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF', 'ENST00000428867.1_1_7:45797631-45798728:-|nuORF', 'ENST00000429741.5_1_7:45796578-45798731:-|nuORF', 'ENST00000449219.2_1_1:224190265-224197055:+|nuORF', 'ENST00000489259.5_1_10:38674311-38691690:-|nuORF'] 88066 17690 QVVGGIYGV True PC9_epitope_Rep4 890.4861675993399 890.48561496793 76.07 1 0.10424987559076086 0.002397291061100956 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 1358 7039 AEEEAAVVAA True H1975_Epitope_Rep2 958.4607406971397 958.4601949679301 32.0 1 0.10424433402320953 0.002397291061100956 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 91771 10803 RPKPSSSPVIF True PC9_epitope_Rep5 1213.68190728377 1213.68080993586 46.544 2 0.10423519757429382 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 6061 14631 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 61.101 2 0.10423461318800244 0.002397291061100956 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 20621 8190 EQEVNILK True PC9_epitope_Rep6 971.5287606873098 971.52766993586 41.067 2 0.10423310024850403 0.002397291061100956 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 68104 6186 LTPEELER True NCI_RA007_Epitope_Rep3 985.5080252427299 985.50692993586 31.339 2 0.1042321114485713 0.002397291061100956 0.9438714419765777 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 110737 19902 TKFGGIVVL True PC9_epitope_Rep1 932.5695033004798 932.56840993586 81.371 2 0.10422601050125375 0.002397291061100956 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 1173 5723 AECPNPSTP True H1975_Epitope_Rep2 914.38038220146 914.37983496793 27.012 1 0.10421500985959233 0.002397291061100956 0.9438714419765777 ['ENSG00000072786|ENST00000176763|STK10', 'ENST00000517360.1_1_5:171471888-171480055:-|nuORF'] 112985 15741 TPSPLPTV True PC9_epitope_Rep3 810.4487194614601 810.4481749679301 65.704 1 0.10421130629161778 0.002397291061100956 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B'] 8320 6398 ATLNSIVAK True NCI_RA007_Epitope_Rep3 915.5389314481899 915.53782993586 32.171 2 0.10420435422638753 0.002397291061100956 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 136674 14435 YIDSSINNV True PC9_epitope_Rep5 1023.4872897981501 1023.4861899358599 60.524 2 0.10420114801475076 0.002397291061100956 0.9438714419765777 ['ENSG00000115977|ENST00000409085|AAK1', 'nc|ENSG00000115977|Q2M2I8-2|AAK1', 'ENST00000495836.1_1_2:69771529-69870271:-|nuORF'] 138600 10689 YRQKQVVIL True PC9_epitope_Rep5 1145.6920780446499 1145.69044490379 46.106 3 0.10418157387894375 0.002397291061100956 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 26751 20177 FLDGNEMTL True PC9_epitope_Rep4 1038.46919720586 1038.46867496793 85.747 1 0.10418080315282417 0.002397291061100956 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 70929 15172 MELITPISA True H1975_Epitope_Rep2 973.5154191222899 973.51487496793 63.515 1 0.1041771870185938 0.002397291061100956 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 84684 12152 QHFDSVM[Oxidation]QL True PC9_epitope_Rep5 1119.5018946969099 1119.5007899358602 51.732 2 0.10417435732808954 0.002397291061100956 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 113384 17596 TQLGPPYHIL True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 75.697 2 0.10417227688883668 0.002397291061100956 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 109210 18632 TFTFSHATF True PC9_epitope_Rep1 1057.4868958753298 1057.48578993586 76.456 2 0.1041552402082959 0.002397291061100956 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 106019 13793 SVLNLVIVK True NCI_RA007_Epitope_Rep2 983.6379172134699 983.63682993586 58.301 2 0.10415408231439044 0.002397291061100956 0.9438714419765777 ['ENSG00000137154|ENST00000380394|RPS6', 'ENST00000464444.1_1_19:13005132-13005321:+|nuORF'] 105967 11613 SVLGQLGITK True NCI_RA007_Epitope_Rep4 1014.6073453611799 1014.60624993586 51.624 2 0.10415371578287672 0.002397291061100956 0.9438714419765777 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1', 'nc|ENSG00000197249|P01009-2|SERPINA1'] 85011 20488 QIFNGTFVKL True PC9_epitope_Rep1 1165.64954452633 1165.64844993586 83.62 2 0.10415356987265559 0.002397291061100956 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000397636.2_1_7:99737498-99738123:-|nuORF'] 715 19879 AAVLSVPAV True PC9_epitope_Rep1 825.4960040070499 825.49490993586 81.284 2 0.10414894890275549 0.002397291061100956 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 25237 15337 FEDDAIQLV True H1975_Epitope_Rep3 1048.50769088956 1048.50717496793 64.405 1 0.10414506041397605 0.002397291061100956 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 138050 21333 YQDPSVLYI True PC9_epitope_Rep5 1096.54407639828 1096.5429699358601 87.114 2 0.10413978097058585 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 107259 14088 SYPSAFSKL True PC9_epitope_Rep4 998.50729696674 998.50618993586 62.098 2 0.10413919464380343 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1', 'MARF1|p.A871Lfs*9|2|0.2|ENSG00000166783|chr16:15621761-15621761|C/-|frameshift_variant'] 21774 12976 ESDFSNPLY True H1975_Epitope_Rep1 1070.4556553167 1070.45507496793 54.99 1 0.10413800920335675 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 97012 5277 SEVQSTVEA True H1975_Epitope_Rep2 948.4400052525599 948.43890993586 25.359 2 0.10413796603075055 0.002397291061100956 0.9438714419765777 ['ENST00000518940.5_1_8:103855961-103870248:-|nuORF'] 86930 4775 QRSGNVAEL True PC9_epitope_Rep2 972.4988575413598 972.49776993586 23.735 2 0.10412880670275348 0.002397291061100956 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 99924 24849 SLIEDLILL True PC9_epitope_Rep1 1027.6165130625498 1027.61540993586 100.48 2 0.10412604637581971 0.002425876010781671 0.9438714419765777 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF', 'ENST00000470510.5_1_1:245912867-246021878:-|nuORF', 'ENST00000366516.5_1_1:245912867-246093251:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-2|SMYD3', 'ENST00000366517.5_1_1:245912867-246116553:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-3|SMYD3', 'ENSG00000185420|ENST00000490107|SMYD3'] 63601 8688 LPLPPPPPRP True H1975_Epitope_Rep1 1079.64915060351 1079.6480499358602 38.349 2 0.10412524591220675 0.002425876010781671 0.9438714419765777 ['ENST00000372441.1_1_6:43477335-43478064:-|nuORF'] 130563 21233 VTYPGELLL True PC9_epitope_Rep4 1003.5589981864299 1003.55790993586 89.836 2 0.10412451050558214 0.002425876010781671 0.9438714419765777 ['ENSG00000146386|ENST00000367660|ABRACL'] 43872 4725 ILDERHDNY True H1975_Epitope_Rep3 1173.54145062933 1173.5398049037901 23.301 3 0.10411647535070821 0.002425876010781671 0.9438714419765777 ['ENSG00000023287|ENST00000025008|RB1CC1', 'nc|ENSG00000023287|Q8TDY2-2|RB1CC1', 'ENST00000522957.1_1_8:53536344-53555381:-|nuORF'] 90903 8121 RLDHWIHSY True H1975_Epitope_Rep2 1225.5992402889701 1225.5976049037902 36.186 3 0.1041082236986079 0.002425876010781671 0.9438714419765777 ['ENSG00000161714|ENST00000619929|PLCD3'] 26080 12680 FHEGDAYVV True PC9_epitope_Rep5 1035.4661604307498 1035.4650699358601 53.779 2 0.10410717635484003 0.002425876010781671 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 47912 22891 IYVPVSLGF True PC9_epitope_Rep1 993.55351888317 993.55297496793 92.847 1 0.10408770489627828 0.002425876010781671 0.9438714419765777 ['ENSG00000172818|ENST00000335987|OVOL1'] 95083 7798 RYSSM[Oxidation]AASF True PC9_epitope_Rep1 1034.44913084806 1034.4480299358602 34.819 2 0.10408611999824692 0.002425876010781671 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 92195 5847 RQGNMTAAL True NCI_RA007_Epitope_Rep4 960.4810993022398 960.48000993586 29.115 2 0.10408488435486299 0.002425876010781671 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5'] 61279 16974 LLDTELDLY True H1975_Epitope_Rep2 1093.55430672881 1093.55377496793 70.539 1 0.10408269570644761 0.002425876010781671 0.9438714419765777 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 39717 11050 HPVLLTEA True PC9_epitope_Rep1 878.4861675993401 878.48561496793 47.392 1 0.1040766712959972 0.002425876010781671 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'POTEF|p.E799K|1|0.23|ENSG00000196604|chr2:130075077-130075077|C/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 28817 9926 FTDGQQLY True H1975_Epitope_Rep2 970.43961132974 970.43850993586 43.169 2 0.10407195669517343 0.002425876010781671 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 21611 15290 ERSPLDQVL True PC9_epitope_Rep6 1055.56112344475 1055.56002993586 70.932 2 0.1040642325917494 0.002425876010781671 0.9438714419765777 ['ENSG00000168994|ENST00000380283|PXDC1'] 105556 9264 SVDSHFQEV True PC9_epitope_Rep2 1046.4668887067398 1046.4657899358601 40.971 2 0.10405674868844106 0.002425876010781671 0.9438714419765777 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 84679 12298 QHFDSVM[Oxidation]QL True PC9_epitope_Rep1 1119.5018946969099 1119.5007899358602 52.159 2 0.10405133071977309 0.002425876010781671 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 88254 17956 QYESKVFYL True PC9_epitope_Rep2 1175.5862755634298 1175.5851699358602 74.373 2 0.1040510628483686 0.002425876010781671 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 105554 10084 SVDSHFQEV True PC9_epitope_Rep1 1046.4668887067398 1046.4657899358601 43.658 2 0.10404835357735591 0.002425876010781671 0.9438714419765777 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 73942 11418 NHLGGGAVVL True PC9_epitope_Rep2 935.51886470995 935.51776993586 49.242 2 0.10404573717799882 0.002425876010781671 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 102594 19371 SQANRLFYL True PC9_epitope_Rep5 1110.5821932425 1110.58108993586 79.557 2 0.10404056520516741 0.002425876010781671 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 12572 17756 DLDLSPLEY True H1975_Epitope_Rep3 1063.50735653639 1063.50677496793 74.256 1 0.10403056724001242 0.002454354983537863 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 137465 20296 YLPDSLTQL True PC9_epitope_Rep4 1048.54407639828 1048.54357496793 86.211 1 0.10402085835043377 0.002454354983537863 0.9438714419765777 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 48519 11306 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 51.579 2 0.10401859883199485 0.002454354983537863 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 118699 4414 VECPPPRTTA True H1975_Epitope_Rep2 1069.52262976105 1069.5215299358601 22.086 2 0.10400714960683063 0.002454354983537863 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 116876 6243 TYNQKHSLF True NCI_RA007_Epitope_Rep4 1136.5614577979202 1136.56036993586 30.619 2 0.10400145800239828 0.002454354983537863 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 57942 11915 LEQNIQLPAA True H1975_Epitope_Rep1 1095.59242357303 1095.5913299358601 50.832 2 0.1039998184190115 0.002454354983537863 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 113320 16337 TQILSVPKV True PC9_epitope_Rep5 983.6015317047498 983.60042993586 67.837 2 0.10399426539509717 0.002454354983537863 0.9438714419765777 ['nc|ENSG00000120802|P42166|TMPO'] 76707 11312 NTPAM[Oxidation]YVAIQA True H1975_Epitope_Rep3 1193.57505963717 1193.57396993586 48.618 2 0.10398016012962484 0.002454354983537863 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000428275.1_1_X:53172669-53172729:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 96034 10221 SEALPSDIAA True H1975_Epitope_Rep3 972.47639076128 972.47528993586 44.363 2 0.10397725502745846 0.002454354983537863 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 96519 7084 SELITKAVA True NCI_RA007_Epitope_Rep4 930.5385970950199 930.53750993586 33.872 2 0.10397650726480692 0.002454354983537863 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-2|p.P39S|2|0.36|ENSG00000187837|chr6:26056314-26056314|G/A|missense_variant', 'ENSG00000184357|ENST00000331442|H1-5'] 58387 10036 LEVNLQAM[Oxidation]K True PC9_epitope_Rep1 1060.5586812970398 1060.55758993586 43.471 2 0.10397527472899513 0.002454354983537863 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 106369 5170 SVSNVVITK True NCI_RA007_Epitope_Rep5 945.54949613189 945.54838993586 26.58 2 0.10397212462632813 0.002454354983537863 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 72546 21332 MVGEGFIEV True PC9_epitope_Rep3 979.4684689298699 979.46792496793 87.35 1 0.10396581997056549 0.002454354983537863 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 83682 10476 QEALSALTA True H1975_Epitope_Rep1 902.4709114580199 902.4703649679301 45.251 1 0.10396012721728899 0.002454354983537863 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 83694 10668 QEALSALTA True H1975_Epitope_Rep3 902.4709114580199 902.4703649679301 46.107 1 0.10395729366011502 0.002454354983537863 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 113467 22350 TQRGALFLLF True PC9_epitope_Rep5 1164.6655289436399 1164.6644299358602 90.978 2 0.10393768292064215 0.002454354983537863 0.9438714419765777 ['ENST00000481988.1_1_X:99901319-99905990:+|nuORF', 'ENSG00000102359|ENST00000373004|SRPX2'] 102822 20039 SQFPGAITL True PC9_epitope_Rep4 932.4967322830399 932.49618496793 85.217 1 0.10393517963630426 0.002454354983537863 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 113584 18643 TRAEEIFSL True PC9_epitope_Rep2 1064.55022440788 1064.54912993586 77.076 2 0.10393306714072935 0.002454354983537863 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 20614 7514 EQEVNILK True NCI_RA007_Epitope_Rep1 971.5287606873098 971.52766993586 33.22 2 0.10393145398303731 0.002454354983537863 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 43265 10568 IHDGLTVHL True PC9_epitope_Rep6 1003.54507945779 1003.5439899358599 51.456 2 0.10393036478879009 0.002454354983537863 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 8659 21959 AVATDFFTV True PC9_epitope_Rep1 969.48074786573 969.47964993586 89.283 2 0.10392978763978897 0.002471414959504526 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 91764 11180 RPKPSSSPVIF True PC9_epitope_Rep3 1213.68190728377 1213.68025490379 48.009 3 0.10392380810964973 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 40274 9764 HRNGGLITL True PC9_epitope_Rep2 979.55631284783 979.55520993586 42.896 2 0.1039233639269268 0.002471414959504526 0.9438714419765777 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 71983 18350 MQAERIFSEV True PC9_epitope_Rep3 1208.5859582936 1208.58486993586 75.794 2 0.10392062066640467 0.002471414959504526 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 47688 21185 IYPTTYVQF True PC9_epitope_Rep1 1130.56481184286 1130.56427496793 86.323 1 0.10391433321556832 0.002471414959504526 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 86848 14678 QRQDIAFAY True PC9_epitope_Rep5 1110.5458077337798 1110.54527496793 61.464 1 0.10390480122049034 0.002471414959504526 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 100650 21033 SLQSTILGV True PC9_epitope_Rep3 916.5229470308799 916.52184993586 86.181 2 0.10390214209534561 0.002471414959504526 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 71346 9981 MHSGPVVAM True PC9_epitope_Rep5 927.43064395251 927.42954993586 43.367 2 0.10389339085840864 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF', 'NMT1-NME1|1|fusion'] 14118 19725 DSEGYLLFY True H1975_Epitope_Rep2 1105.49679185269 1105.4956899358601 81.841 2 0.10388645384301912 0.002471414959504526 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 86415 10286 QQPQPLPPP True PC9_epitope_Rep2 1000.5341804209198 1000.53308993586 44.896 2 0.10388476913272511 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000204540|Q9UIG5-2|PSORS1C1', 'PSORS1C1|p.P145Lfs*7|1|0.33|ENSG00000204540|chr6:31139906-31139906|C/-|frameshift_variant', 'ENSG00000204540|ENST00000259881|PSORS1C1'] 109735 8874 THGPPVQL True PC9_epitope_Rep2 847.45520182423 847.45410993586 39.488 2 0.10388397782660043 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 70041 12477 LYGRHFNYL True PC9_epitope_Rep4 1181.59817765981 1181.59654490379 55.8 3 0.10388185397104034 0.002471414959504526 0.9438714419765777 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 112678 20207 TPFTGPFISV True PC9_epitope_Rep6 1064.55424715916 1064.5531499358601 90.4 2 0.10387927752585174 0.002471414959504526 0.9438714419765777 ['ENSG00000164142|ENST00000435205|FHIP1A'] 29254 21086 FVDFNDPNF True PC9_epitope_Rep2 1113.47672511445 1113.47562993586 86.564 2 0.10387591526994834 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 26825 21148 FLEKLLPPV True PC9_epitope_Rep1 1054.6426682407398 1054.6415699358602 86.178 2 0.10387547047663277 0.002471414959504526 0.9438714419765777 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 62289 18138 LLQNNLPAV True PC9_epitope_Rep4 980.5654805492 980.56438993586 77.832 2 0.10387530231974994 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 100124 18764 SLLDDLHSA True PC9_epitope_Rep5 969.47672511445 969.47562993586 77.186 2 0.10387380976293817 0.002471414959504526 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 74103 16576 NHVSSPFEL True PC9_epitope_Rep1 1028.4927095317598 1028.4916099358602 68.583 2 0.1038562131826668 0.002471414959504526 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 25940 13802 FGQLFRPDNF True NCI_RA007_Epitope_Rep1 1239.6036569630699 1239.60254993586 57.704 2 0.1038547164988972 0.002471414959504526 0.9438714419765777 ['ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 107644 21752 TAIDILTTV True PC9_epitope_Rep5 945.5382627418501 945.53716993586 88.698 2 0.10385412248023088 0.002471414959504526 0.9438714419765777 ['ENSG00000198700|ENST00000361565|IPO9'] 103185 13930 SQPPVQVSV True PC9_epitope_Rep1 939.5025459394699 939.50144993586 58.417 2 0.10385077513115794 0.002471414959504526 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 2042 9044 AELEGLVRA True NCI_RA007_Epitope_Rep3 956.5290950404799 956.52798993586 42.669 2 0.10384910483403528 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000073969|P46459-2|NSF', 'ENSG00000073969|ENST00000398238|NSF'] 113227 19364 TQDTPIPAL True PC9_epitope_Rep5 954.5022115862998 954.50110993586 79.53 2 0.10384224679477942 0.002471414959504526 0.9438714419765777 ['MINDY4|p.W431*|2|0.17|ENSG00000106125|chr7:30839252-30839252|G/-|frameshift_variant', 'ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 72102 15030 MRDPIRILV True PC9_epitope_Rep6 1111.65358436095 1111.65248993586 69.84 2 0.10382222007942096 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000428062.1_1_13:37512878-37513004:-|nuORF', 'ENST00000485101.5_1_3:186504293-186504446:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 25515 7957 FEQEMATAA True NCI_RA007_Epitope_Rep2 996.4222470134398 996.42114993586 35.582 2 0.10380228034918733 0.002471414959504526 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 113643 7735 TRDEDHIAL True PC9_epitope_Rep1 1068.51998690876 1068.5188899358602 34.574 2 0.10379504255728968 0.002471414959504526 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 24109 5575 EYSKQMQRF True NCI_RA007_Epitope_Rep2 1215.57064258263 1215.56899490379 26.301 3 0.10379490102553843 0.002471414959504526 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 40048 8486 HQVTLEESL True NCI_RA007_Epitope_Rep3 1054.5294889633 1054.52838993586 40.455 2 0.10379221044502167 0.002471414959504526 0.9438714419765777 ['BMP2K-CDS1|1|fusion', 'ENSG00000138756|ENST00000502613|BMP2K', 'nc|ENSG00000138756|Q9NSY1-2|BMP2K', 'nc|ENSG00000138756|Q9NSY1-3|BMP2K'] 95086 6298 RYSSM[Oxidation]AASF True PC9_epitope_Rep4 1034.44913084806 1034.4480299358602 31.286 2 0.10379067531734064 0.002471414959504526 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 132887 13305 VYTSVVEEL True NCI_RA007_Epitope_Rep3 1037.5280919809697 1037.52698993586 59.602 2 0.10378870229676282 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 28316 11754 FRYTAGTPY True PC9_epitope_Rep2 1074.5134449763398 1074.5123499358601 50.544 2 0.10378681889943049 0.002471414959504526 0.9438714419765777 ['ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 84598 5932 QHDPSAVAV True PC9_epitope_Rep1 922.4508447197799 922.44974993586 27.631 2 0.1037838568896864 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 21269 5800 ERIMKAQAL True PC9_epitope_Rep4 1058.5906497512199 1058.58954993586 29.166 2 0.10377421847372478 0.002471414959504526 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 34666 22391 GQLDFSEFL True PC9_epitope_Rep4 1054.49712620586 1054.4960299358602 94.36 2 0.10377263676187472 0.002471414959504526 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 53357 10265 KTTTIAVEV True PC9_epitope_Rep2 960.5491617787198 960.54806993586 44.817 2 0.10377183819508956 0.002471414959504526 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 34795 7258 GQTGVIRSV True PC9_epitope_Rep3 915.5137793295099 915.51268993586 32.927 2 0.10376575308535561 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 68696 21593 LVDDNYFYL True PC9_epitope_Rep4 1160.5389910178399 1160.5378899358602 91.241 2 0.1037521669846549 0.002471414959504526 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 96775 9511 SEQSVAVMP True H1975_Epitope_Rep2 946.4429824580199 946.44188993586 41.553 2 0.10374876887200211 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 1384 8188 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 36.447 2 0.1037453660979357 0.002471414959504526 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 136394 10813 YHEDIHTYL True PC9_epitope_Rep6 1189.54038800017 1189.53874490379 52.441 3 0.10373435259090272 0.002471414959504526 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2'] 116353 19803 TVYEGFISA True PC9_epitope_Rep2 985.4756624852898 985.47456993586 81.561 2 0.10372896599194138 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 53833 14261 KYGIVQEFF True NCI_RA007_Epitope_Rep3 1129.58079626017 1129.5796899358602 63.413 2 0.10372525020276564 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000149639|O94964-1|MTCL2', 'ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-3|MTCL2'] 103931 11099 SRPENAIIY True PC9_epitope_Rep5 1061.5505587610498 1061.54946993586 47.68 2 0.10372465471527896 0.002471414959504526 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 83692 10656 QEALSALTA True H1975_Epitope_Rep3 902.4709114580199 902.46980993586 46.062 2 0.10371022182631864 0.002471414959504526 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 71851 14845 MPFPNIRSA True PC9_epitope_Rep4 1031.5222358382298 1031.52112993586 65.041 2 0.10370959769859507 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'nc|ENSG00000013573|Q96FC9-4|DDX11', 'nc|ENSG00000013573|Q96FC9-3|DDX11', 'ENSG00000013573|ENST00000542838|DDX11', 'nc|ENSG00000013573|Q96FC9|DDX11', 'DDX11|p.E807Q|1|0.28|ENSG00000013573|chr12:31102982-31102982|G/C|missense_variant', 'ENST00000537136.1_1_12:31255149-31256026:+|nuORF', 'ENST00000435753.6_1_12:31250908-31256767:+|nuORF', 'ENST00000536265.5_1_12:31242773-31256767:+|nuORF'] 103530 17739 SRDDNMFQI True PC9_epitope_Rep1 1124.49205790876 1124.4909699358602 73.031 2 0.10370918772158805 0.002471414959504526 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 102678 2549 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 14.72 2 0.10370838851972744 0.002471414959504526 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 140654 21660 YYPNPPLVL True PC9_epitope_Rep1 1074.57498260374 1074.57447496793 88.144 1 0.10370219193182519 0.002471414959504526 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 140316 7477 YYEEQHPEL True NCI_RA007_Epitope_Rep3 1206.5193182024198 1206.51822993586 36.532 2 0.10370127861793416 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 75037 13736 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 57.981 2 0.10369106359334442 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 104979 4395 STIDPAVSK True NCI_RA007_Epitope_Rep4 916.48656152216 916.48546993586 23.258 2 0.10367781799460112 0.002471414959504526 0.9438714419765777 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 95173 18306 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41156993586 75.62 2 0.10367189278822328 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 133058 13448 VYVVGTAHF True PC9_epitope_Rep6 991.5127167003499 991.51160993586 63.418 2 0.10366431536550613 0.002471414959504526 0.9438714419765777 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 75034 13322 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40450993586 56.373 2 0.10366107087579392 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 126364 11833 VPLAIVNKA True PC9_epitope_Rep5 923.58040233735 923.57930993586 50.513 2 0.10366005574513162 0.002471414959504526 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 38930 20570 HIPDVITYL True PC9_epitope_Rep2 1069.58079626017 1069.5796899358602 84.557 2 0.10364543482178801 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 89830 7716 RFKTQPVTF True NCI_RA007_Epitope_Rep4 1122.6185787512197 1122.61748993586 36.351 2 0.10364531352867325 0.002471414959504526 0.9438714419765777 ['ENSG00000187479|ENST00000617612|C11orf96', 'nc|nan|Q7Z7L8|C11orf96'] 52533 5296 KPPPPPPPP True PC9_epitope_Rep5 922.5276384884999 922.52654993586 25.384 2 0.10364228065153232 0.002471414959504526 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 109534 18984 THALPIPVI True PC9_epitope_Rep4 959.5804023373499 959.57930993586 81.114 2 0.10362990974558964 0.002471414959504526 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 18771 12011 ELDPTNMTY True H1975_Epitope_Rep3 1082.45902644498 1082.45847496793 51.361 1 0.10362951148965843 0.002471414959504526 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 25530 15120 FEQFPPPEI True H1975_Epitope_Rep2 1102.5335117145798 1102.5324099358602 63.313 2 0.10362382721625453 0.002471414959504526 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 107640 21831 TAIDILTTV True PC9_epitope_Rep1 945.5382627418501 945.53716993586 88.782 2 0.1036148202497983 0.002471414959504526 0.9438714419765777 ['ENSG00000198700|ENST00000361565|IPO9'] 75028 9241 NM[Oxidation]DNM[Oxidation]FESY True H1975_Epitope_Rep2 1181.40052635357 1181.39942993586 40.501 2 0.10359886338470616 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 132285 20077 VYLDKFIRL True PC9_epitope_Rep5 1165.68593003505 1165.68427490379 82.276 3 0.10359401362175584 0.002471414959504526 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 114068 18207 TRPPLLAL True PC9_epitope_Rep1 879.5541875895099 879.55308993586 74.825 2 0.10358966012604445 0.002471414959504526 0.9438714419765777 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1', 'ROR1-PGM1|1|fusion'] 25585 7035 FESSGIHVA True H1975_Epitope_Rep3 945.45559574705 945.45448993586 32.025 2 0.10358300215180999 0.002471414959504526 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 71075 5951 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 27.901 1 0.1035802535413143 0.002471414959504526 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 97792 13806 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 57.948 2 0.1035739552492128 0.002471414959504526 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 45993 9663 ISTEVNPKL True PC9_epitope_Rep4 999.56006081559 999.55896993586 44.796 2 0.10357368868905864 0.002471414959504526 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 98353 7392 SIHENFSQA True PC9_epitope_Rep1 1031.4672230599099 1031.4661299358602 33.247 2 0.103568553044418 0.002471414959504526 0.9438714419765777 ['ENSG00000125633|ENST00000376300|CCDC93'] 9360 4934 AVTTVVNPK True NCI_RA007_Epitope_Rep2 927.5389314481899 927.53782993586 23.813 2 0.10356618110374158 0.002471414959504526 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1'] 95574 6510 SASGPLHSV True PC9_epitope_Rep3 853.4293809992101 853.42828993586 30.068 2 0.10356218673942515 0.002471414959504526 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 35183 10655 GSDFYSMHY True H1975_Epitope_Rep2 1105.41749598617 1105.41638993586 46.009 2 0.10355129329663185 0.002471414959504526 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 47084 14380 IVVGRITEV True PC9_epitope_Rep5 984.5967806774798 984.59568993586 60.313 2 0.10354756056010037 0.002471414959504526 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 133206 16202 WEALVSPVV True H1975_Epitope_Rep3 998.54368247546 998.5431349679301 67.777 1 0.10354483955500568 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 99271 22245 SLDDLLTNV True PC9_epitope_Rep5 988.5076908895601 988.50658993586 90.573 2 0.1035440215521618 0.002471414959504526 0.9438714419765777 ['ENSG00000143819|ENST00000272167|EPHX1'] 91565 18522 RPALPVSYLQA True PC9_epitope_Rep1 1213.68190728377 1213.68080993586 76.034 2 0.10353719545926351 0.002471414959504526 0.9438714419765777 ['ENSG00000167615|ENST00000326764|LENG8'] 14828 17300 DYEAGHLSF True PC9_epitope_Rep1 1037.4454249861699 1037.4443299358602 71.36 2 0.10352801410892917 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000154370|Q96F44-3|TRIM11', 'ENSG00000154370|ENST00000284551|TRIM11'] 140482 16306 YYIFIPSKF True NCI_RA007_Epitope_Rep2 1176.6219327961599 1176.62082993586 68.156 2 0.10352734698813301 0.002471414959504526 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 132924 22081 VYTVVDEMF True PC9_epitope_Rep3 1101.5052483614097 1101.5041499358601 90.23 2 0.10352193906259811 0.002471414959504526 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 139793 20637 YVDDFGVSV True PC9_epitope_Rep5 999.4549270407099 999.4543749679301 84.433 1 0.10351894619472483 0.002471414959504526 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 108431 8152 TEEGYVPTA True H1975_Epitope_Rep2 965.4341915961298 965.43364496793 36.306 1 0.10351887273662315 0.002471414959504526 0.9438714419765777 ['ENSG00000060558|ENST00000262958|GNA15'] 72488 12296 M[Oxidation]VAPAVASV True PC9_epitope_Rep5 859.4473399429099 859.44624993586 52.287 2 0.10351688619490813 0.002471414959504526 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 92201 5208 RQGSPTPAL True NCI_RA007_Epitope_Rep4 925.4981292653699 925.49702993586 26.568 2 0.10351301480722162 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1'] 130747 10930 VVDPNDPQM True PC9_epitope_Rep5 1013.44879611445 1013.44768993586 47.032 2 0.10351171639714575 0.002471414959504526 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 120301 10602 VFPEKGYSF True NCI_RA007_Epitope_Rep5 1072.5229470308798 1072.52184993586 47.418 2 0.10350956513501655 0.002471414959504526 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 30398 15367 GAFFGPIRL True H1975_Epitope_Rep2 976.5494365622399 976.54832993586 64.268 2 0.10350618683459838 0.002471414959504526 0.9438714419765777 ['ENSG00000167113|ENST00000300452|COQ4', 'nc|ENSG00000167113|Q9Y3A0-2|COQ4'] 86601 13474 QRDGIITQL True PC9_epitope_Rep2 1042.5771078620598 1042.5760099358602 57.109 2 0.10350547204169501 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF'] 34955 17017 GQWVGTVLL True NCI_RA007_Epitope_Rep4 971.5440168286299 971.54290993586 73.738 2 0.10350090325335 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF'] 139692 11304 YTTDRVMTV True PC9_epitope_Rep5 1084.5222954078802 1084.52118993586 48.473 2 0.10350090046522589 0.002471414959504526 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 119778 5927 VEVANPPA True H1975_Epitope_Rep3 795.4126683059098 795.41156993586 27.808 2 0.10349949088357947 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 8063 8811 ATEDPWKTNY True H1975_Epitope_Rep2 1223.54586730343 1223.5447699358601 38.857 2 0.10349472713332902 0.002471414959504526 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 139799 16190 YVDDGLISL True H1975_Epitope_Rep1 993.5018772331299 993.50132496793 67.622 1 0.10348907499265203 0.002471414959504526 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 84269 12373 QEYFGSLAA True H1975_Epitope_Rep1 984.4552613938797 984.45471496793 52.623 1 0.1034579950421283 0.002471414959504526 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 7522 13396 ASETGFLTY True H1975_Epitope_Rep2 987.4549270407099 987.4543749679301 56.662 1 0.10345488237839627 0.002471414959504526 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 88327 16597 QYLNKNALTTL True PC9_epitope_Rep5 1277.6979512707298 1277.6968499358602 68.845 2 0.10345413523739008 0.002471414959504526 0.9438714419765777 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant'] 39961 13370 HQQSIPAVL True PC9_epitope_Rep1 991.5450794577898 991.5445349679301 56.288 1 0.10344951677973188 0.002471414959504526 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 88987 3153 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 16.695 2 0.10344391214345679 0.002471414959504526 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 130461 16471 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 71.328 2 0.10343135673352769 0.002471414959504526 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 16548 5836 EEQHPELTP True H1975_Epitope_Rep3 1078.4931034545798 1078.49200993586 27.463 2 0.10343118615760263 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 73796 10559 NHDTALTL True PC9_epitope_Rep3 883.43994568291 883.43884993586 45.562 2 0.10342342974689071 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 6458 6549 APSVGIKAA True PC9_epitope_Rep5 812.4756029156399 812.4745099358599 30.164 2 0.10342292994426398 0.002471414959504526 0.9438714419765777 ['ENSG00000106588|ENST00000223321|PSMA2'] 101879 7337 SPLFSQHTA True PC9_epitope_Rep6 986.48214484806 986.48104993586 37.395 2 0.10342095398482559 0.002471414959504526 0.9438714419765777 ['ENSG00000167721|ENST00000301364|TSR1'] 138223 15727 YQTEIGQTL True PC9_epitope_Rep2 1051.51858992643 1051.51807496793 65.765 1 0.10341522912623297 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 85809 4704 QLYWSHPRK True NCI_RA007_Epitope_Rep4 1213.6356257976897 1213.63399490379 24.524 3 0.10341154045149817 0.002471414959504526 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 88396 20166 QYPVIIHLI True PC9_epitope_Rep4 1094.64881625034 1094.6477099358601 85.705 2 0.10340746332435247 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 96006 9199 SEAFSVASA True H1975_Epitope_Rep3 867.3974121645899 867.39686496793 40.376 1 0.10340461866963133 0.002471414959504526 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 5174 22968 ALPEIFTEL True PC9_epitope_Rep2 1031.55391280599 1031.55337496793 93.839 1 0.10340448718309624 0.002471414959504526 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 74607 13358 NLDQPDLYY True H1975_Epitope_Rep2 1139.51350454599 1139.51297496793 56.515 1 0.1034011907444561 0.002471414959504526 0.9438714419765777 ['ENSG00000171853|ENST00000324266|TRAPPC12'] 26746 21151 FLDGNEMTL True PC9_epitope_Rep1 1038.46919720586 1038.46867496793 86.19 1 0.10339805798631094 0.002471414959504526 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 86141 7703 QPRYPVNSV True PC9_epitope_Rep2 1058.55089311422 1058.5497899358602 35.004 2 0.10338735290884872 0.002471414959504526 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 2017 7729 AELATRALP True H1975_Epitope_Rep2 940.5341804209199 940.53308993586 34.682 2 0.10338496713882421 0.002471414959504526 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 5868 16631 APGNPVLAV True PC9_epitope_Rep5 836.4756029156399 836.4745099358599 68.977 2 0.10338427275589 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 113580 8857 TRADTTTIL True PC9_epitope_Rep2 990.53457434374 990.53346993586 39.42 2 0.10337993019024833 0.002471414959504526 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 47191 10799 IYAIVKEKY True PC9_epitope_Rep1 1125.64339651673 1125.6417449037901 46.425 3 0.1033712075445067 0.002471414959504526 0.9438714419765777 ['ENST00000473576.6_1_13:50235206-50237234:-|nuORF', 'EBPL|p.F172Lfs*7|1|0.15|ENSG00000123179|chr13:49661073-49661073|A/-|frameshift_variant', 'ENSG00000123179|ENST00000242827|EBPL', 'nc|ENSG00000123179|Q9BY08-5|EBPL', 'ENST00000569153.1_1_16:64294558-64295142:-|nuORF'] 134870 9639 YAAQENLEY True H1975_Epitope_Rep2 1099.48220441771 1099.48110993586 42.055 2 0.10337116105910077 0.002471414959504526 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21'] 106363 5012 SVSNVVITK True NCI_RA007_Epitope_Rep3 945.54949613189 945.54838993586 26.711 2 0.1033678281760305 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 88997 3893 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 20.096 2 0.10336754428241819 0.002471414959504526 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 119844 6258 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51731496793 29.083 1 0.10336658688835934 0.002471414959504526 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 75117 9197 NMVAKVDEV True PC9_epitope_Rep4 1003.5008316873099 1003.49972993586 42.973 2 0.10336179494288468 0.002471414959504526 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 127228 20979 VQIGDIVTV True PC9_epitope_Rep3 942.5385970950199 942.5380449679301 85.976 1 0.10336174904507543 0.002471414959504526 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 114584 5287 TSLDKFYRK True NCI_RA007_Epitope_Rep4 1156.6240580544797 1156.62241490379 26.887 3 0.10334799578392342 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3'] 97855 5735 SHITPSTQQHL True PC9_epitope_Rep5 1247.62584895963 1247.62474993586 27.053 2 0.10332836163298585 0.002471414959504526 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 24452 13323 FAHSFIEL True H1975_Epitope_Rep2 962.4861675993399 962.48506993586 56.377 2 0.10332514927517734 0.002471414959504526 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 34775 22295 GQSELTLLL True PC9_epitope_Rep5 972.54916177872 972.54806993586 90.764 2 0.103323666166511 0.002471414959504526 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 108519 14364 TEFPGVVV True H1975_Epitope_Rep2 846.4487194614599 846.4481749679301 60.401 1 0.10332274016836131 0.002471414959504526 0.9438714419765777 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 63887 19471 LPVLIPVAS True PC9_epitope_Rep6 907.5742543277499 907.57314993586 87.559 2 0.10332104588914906 0.002471414959504526 0.9438714419765777 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 134411 11473 WTDGSTLQY True H1975_Epitope_Rep3 1069.47163973401 1069.4705499358602 49.252 2 0.1033209192387052 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 72336 12903 MTDGGLNLY True H1975_Epitope_Rep2 982.44298245802 982.44243496793 54.743 1 0.10331625013003251 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3'] 123129 13098 VHDESAFVV True PC9_epitope_Rep5 1001.4818104948898 1001.48070993586 55.385 2 0.10331272920638124 0.002471414959504526 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 108904 6930 TESQALVSA True H1975_Epitope_Rep3 904.4501760134399 904.44962496793 31.617 1 0.1033090709242758 0.002471414959504526 0.9438714419765777 ['ENST00000487995.1_1_1:212957698-212965105:-|nuORF', 'nc|ENSG00000117697|Q96IY1-2|NSL1', 'ENSG00000117697|ENST00000366977|NSL1'] 8038 10518 ATDVNDALGY True H1975_Epitope_Rep2 1037.4665543535698 1037.46544993586 45.477 2 0.10330813154394859 0.002471414959504526 0.9438714419765777 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 46644 16266 ITVEKIIKI True PC9_epitope_Rep1 1055.69543208959 1055.6943299358602 67.386 2 0.1033075287688215 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 47340 14504 IYHDLEQSI True PC9_epitope_Rep3 1116.54513902744 1116.5440499358601 60.909 2 0.10330601873532473 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000100266|Q9UNF0-2|PACSIN2', 'ENSG00000100266|ENST00000263246|PACSIN2'] 24184 15736 EYTPRSWNF True PC9_epitope_Rep6 1198.54072235334 1198.5396299358601 72.754 2 0.10330210194468657 0.002471414959504526 0.9438714419765777 ['ENSG00000156671|ENST00000542569|SAMD8'] 37748 10626 HAVGDIPGV True PC9_epitope_Rep4 863.45011644379 863.4495649679301 48.624 1 0.10329664509659958 0.002471414959504526 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 120271 16817 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 69.838 2 0.10329448300250767 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 102150 14986 SPRPPLISV True PC9_epitope_Rep1 964.57056592964 964.56946993586 62.464 2 0.10328207424887186 0.002471414959504526 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 24062 7984 EYQKVGQSF True PC9_epitope_Rep2 1084.5189242795998 1084.5178299358602 36.074 2 0.10328074373395478 0.002471414959504526 0.9438714419765777 ['ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0-3|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 43387 9130 IHQENMGQAL True PC9_epitope_Rep5 1139.53934245435 1139.5382499358602 40.065 2 0.10328054374354119 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 7886 5057 ATAPPSPLK True NCI_RA007_Epitope_Rep4 880.50181766348 880.50072993586 25.951 2 0.10328012554514157 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'RREB1|p.A584Gfs*8|1|0.14|ENSG00000124782|chr6:7229846-7229847|-/G|frameshift_variant', 'nc|ENSG00000124782|Q92766-6|RREB1', 'ENST00000475946.5_1_6:7182144-7211943:+|nuORF'] 102697 16588 SQDPTMIGV True PC9_epitope_Rep3 946.44298245802 946.44188993586 68.942 2 0.10327995155242606 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 41225 17110 IADSNYNWFY True H1975_Epitope_Rep2 1291.55095268387 1291.54984993586 71.088 2 0.1032750349113205 0.002471414959504526 0.9438714419765777 ['ENSG00000171451|ENST00000310045|DSEL', 'DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 17186 15594 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 64.802 2 0.10327005611364017 0.002471414959504526 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 42440 13857 IEQFPGIEP True H1975_Epitope_Rep2 1028.5178616504397 1028.51727496793 58.447 1 0.10326872565630571 0.002471414959504526 0.9438714419765777 ['ENST00000487133.1_1_X:119739298-119742228:+|nuORF', 'nc|ENSG00000232119|Q9ULC4-2|MCTS1', 'ENSG00000232119|ENST00000371317|MCTS1', 'nc|ENSG00000232119|Q9ULC4-3|MCTS1', 'MCTS1|p.Y79Ifs*4|1|0.59|ENSG00000232119|chrX:120606145-120606145|T/-|frameshift_variant'] 130942 10478 VVINYSIVK True NCI_RA007_Epitope_Rep2 1033.6171817688898 1033.6160899358601 45.351 2 0.10326827453445717 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENST00000556921.1_1_14:100551177-100572452:+|nuORF', 'ENST00000557637.1_1_14:100531783-100564000:+|nuORF', 'ENST00000554460.5_1_14:100540857-100568654:+|nuORF'] 83688 10833 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 46.698 2 0.10326402394315241 0.002471414959504526 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 21767 11163 ESDEVELSY True H1975_Epitope_Rep3 1069.44515020265 1069.4440499358602 48.036 2 0.10326378446057718 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 11545 10016 DGNASGTTLLE True H1975_Epitope_Rep1 1076.49858275784 1076.49807496793 43.463 1 0.10325526901948545 0.002471414959504526 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5'] 31963 7463 GESPVDYDGGR True PC9_epitope_Rep1 1150.4890807032998 1150.48798993586 33.523 2 0.10325272145208136 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 1278 5397 AEDRQVSITA True H1975_Epitope_Rep2 1088.5462016566 1088.5451099358602 25.792 2 0.10323738134622062 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 73863 18934 NHFPGSFQI True PC9_epitope_Rep3 1045.49812926537 1045.4970299358602 78.054 2 0.10322945763641385 0.002471414959504526 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 37289 18428 GVVPQLVKL True PC9_epitope_Rep4 951.6117024656298 951.61060993586 78.952 2 0.10321661407497579 0.002471414959504526 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 46119 22342 ITAFDLTDV True PC9_epitope_Rep2 993.5018772331299 993.50132496793 91.425 1 0.10321434799212945 0.002471414959504526 0.9438714419765777 ['ENSG00000100228|ENST00000263116|RAB36', 'nc|ENSG00000100228|O95755-2|RAB36'] 65068 16895 LSDLGLLSY True H1975_Epitope_Rep1 979.52261267771 979.5220649679301 70.398 1 0.1032121806409694 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 24310 17549 FADFDGVLY True H1975_Epitope_Rep2 1045.4756624852898 1045.47456993586 72.809 2 0.10320033515259454 0.002471414959504526 0.9438714419765777 ['ENSG00000163466|ENST00000315717|ARPC2', 'ENST00000489598.5_1_2:219082193-219099125:+|nuORF', 'ENST00000491780.5_1_2:219082193-219100082:+|nuORF', 'ENST00000465395.5_1_2:219082193-219103574:+|nuORF'] 84853 14438 QHQESIIQL True PC9_epitope_Rep2 1094.5720224816198 1094.57092993586 60.803 2 0.10319969575338281 0.002471414959504526 0.9438714419765777 ['ENSG00000084112|ENST00000326495|SSH1', 'nc|ENSG00000084112|Q8WYL5-4|SSH1'] 9661 21941 AYGNVFSAF True PC9_epitope_Rep1 974.4497820906199 974.44923496793 89.214 1 0.10319617478325324 0.002471414959504526 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 103457 16272 SRAGLQFPV True PC9_epitope_Rep5 973.53451477409 973.53340993586 67.584 2 0.10319571388831786 0.002471414959504526 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC4|p.R30Q|1|0.07|ENSG00000278463|chr6:26033480-26033480|C/T|missense_variant', 'H2AC13|p.R30P|1|0.16|ENSG00000196747|chr6:27808298-27808298|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 37740 11245 HAVGDIPGV True PC9_epitope_Rep2 863.45011644379 863.44900993586 48.579 2 0.10319481893610803 0.002471414959504526 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 35930 19206 GVAPGFQVV True PC9_epitope_Rep2 872.4756029156399 872.4745099358599 79.249 2 0.10319356482569013 0.002471414959504526 0.9438714419765777 ['ENSG00000165724|ENST00000298585|ZMYND19'] 27840 19610 FQLEHIM[Oxidation]DL True PC9_epitope_Rep5 1160.5535959166 1160.5524899358602 80.482 2 0.1031883582345489 0.002471414959504526 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 37291 19496 GVVPQLVKL True PC9_epitope_Rep5 951.6117024656298 951.61060993586 80.044 2 0.10316532550537295 0.002471414959504526 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 8984 10756 AVHETLVAV True PC9_epitope_Rep4 937.5232813840498 937.52218993586 49.13 2 0.1031640778226341 0.002471414959504526 0.9438714419765777 ['SLC39A3|p.V234Sfs*3|1|0.26|ENSG00000141873|chr19:2732996-2732996|C/-|frameshift_variant', 'ENSG00000141873|ENST00000269740|SLC39A3'] 3995 18301 AHFPINVVI True PC9_epitope_Rep6 1008.5756513100799 1008.57454993586 83.038 2 0.10315884387574216 0.002471414959504526 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF'] 38585 13422 HHGTSILTL True PC9_epitope_Rep3 977.52942939365 977.52832993586 56.667 2 0.10315003070044522 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-5|PARPBP'] 28261 13763 FRVKYETEL True PC9_epitope_Rep1 1183.62372370131 1183.62208490379 57.784 3 0.10314791804517508 0.002471414959504526 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 39127 16276 HLDLGILYY True H1975_Epitope_Rep3 1105.58079626017 1105.5802749679299 68.073 1 0.10314630051711599 0.002471414959504526 0.9438714419765777 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF'] 37979 10706 HEGLPGLAV True H1975_Epitope_Rep2 891.4814165720699 891.48030993586 46.205 2 0.10314085748870747 0.002471414959504526 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 92185 12941 RQFSTPFQL True NCI_RA007_Epitope_Rep4 1122.5821932425 1122.58108993586 56.868 2 0.10313990830516795 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 44615 13075 IPHSLPGAVAA True PC9_epitope_Rep3 1031.5763795860698 1031.5752899358602 55.318 2 0.10313617100988197 0.002471414959504526 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 116801 21476 TYLPTSPLL True PC9_epitope_Rep3 1003.55899818643 1003.55847496793 87.899 1 0.10313312669942705 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 137319 10794 YLIGQHVTA True PC9_epitope_Rep2 1000.53418042092 1000.53308993586 46.837 2 0.10312542890746934 0.002471414959504526 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 102720 16869 SQDTSFTTL True PC9_epitope_Rep1 998.4556553167 998.45454993586 69.711 2 0.10312477441650211 0.002471414959504526 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 118981 9156 VEFDSVQSA True NCI_RA007_Epitope_Rep4 980.445090633 980.44398993586 42.058 2 0.10311431327697446 0.00249295147648019 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 30403 6790 GAFGKPSSL True H1975_Epitope_Rep3 862.45486747106 862.45376993586 31.073 2 0.10310398546024875 0.00249295147648019 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 96184 11675 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.45890993586 49.98 2 0.10310012946761182 0.00249295147648019 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 73803 11085 NHDTGEYVL True PC9_epitope_Rep1 1046.46688870674 1046.4657899358601 47.526 2 0.10309986439139619 0.00249295147648019 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 3899 10206 AHDDSVM[Oxidation]YL True PC9_epitope_Rep4 1065.44371111445 1065.4426099358602 46.934 2 0.10309953935048491 0.00249295147648019 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 23906 19044 EYMLEKSFYQF True PC9_epitope_Rep6 1483.6693535643901 1483.66824993586 85.897 2 0.10309600295123668 0.00249295147648019 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 40208 6863 HRGTGIAL True PC9_epitope_Rep5 823.46643521427 823.46532993586 31.369 2 0.1030923582766999 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 99140 23262 SLALISIEL True PC9_epitope_Rep1 957.57464825057 957.57354993586 94.263 2 0.10309104775279389 0.00249295147648019 0.9438714419765777 ['EFR3A|p.T559S|1|0.41|ENSG00000132294|chr8:131984239-131984239|C/G|missense_variant'] 88982 2825 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 15.012 2 0.1030872737961333 0.00249295147648019 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 24339 21735 FADPDDFTL True PC9_epitope_Rep1 1039.4498416602698 1039.44927496793 88.435 1 0.10308014033573973 0.00249295147648019 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 113810 12831 TRDVVHLDL True PC9_epitope_Rep2 1066.5771078620598 1066.5760099358602 54.657 2 0.10307759809042155 0.00249295147648019 0.9438714419765777 ['ENSG00000164543|ENST00000319357|STK17A'] 102430 12539 SPVYVGRVV True PC9_epitope_Rep3 974.5549158654999 974.55380993586 53.254 2 0.10307207886534307 0.00249295147648019 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 98390 13313 SIIDDRVIL True NCI_RA007_Epitope_Rep5 1042.60225998074 1042.60116993586 57.889 2 0.10306690955723079 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'ENSG00000165475|ENST00000298248|CRYL1'] 126308 18534 VPIPNSPFKVA True PC9_epitope_Rep3 1167.66519459047 1167.6640899358601 76.509 2 0.1030644798355471 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 113535 21729 TQVAIVNIL True PC9_epitope_Rep3 969.58588164061 969.58478993586 88.875 2 0.10306319729015141 0.00249295147648019 0.9438714419765777 ['ENSG00000115084|ENST00000245680|SLC35F5'] 22372 13018 ETERFRELLLY True H1975_Epitope_Rep2 1467.7721788401498 1467.7705349037901 55.193 3 0.10305568991974486 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 32450 14113 GGHGPSFPL True PC9_epitope_Rep3 867.42390169595 867.42280993586 59.371 2 0.10304436470839028 0.00249295147648019 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 44667 20081 IPLQDLVAA True PC9_epitope_Rep4 938.5436824754598 938.54258993586 85.374 2 0.10304397855797517 0.00249295147648019 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 139640 15111 YTSDYFISY True H1975_Epitope_Rep2 1157.49170647225 1157.49117496793 63.278 1 0.1030431755405132 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 41023 9123 HYGQSGISM True PC9_epitope_Rep1 978.4229157197799 978.42180993586 39.942 2 0.10304165899899208 0.00249295147648019 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 68787 13003 LVDPSVYGY True H1975_Epitope_Rep3 1011.49131254943 1011.4907749679301 55.25 1 0.10303818749535605 0.00249295147648019 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 64051 14134 LQDPNHLTL True PC9_epitope_Rep3 1049.55055876105 1049.54946993586 59.451 2 0.10303645845311925 0.00249295147648019 0.9438714419765777 ['KCTD21|p.H177R|1|0.41|ENSG00000188997|chr11:78174025-78174025|T/C|missense_variant', 'ENSG00000188997|ENST00000340067|KCTD21'] 33198 19326 GLAAGGIVAV True PC9_epitope_Rep1 826.4912529797799 826.49014993586 79.143 2 0.10303164253204258 0.00249295147648019 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 43624 19162 IIIQTVPTL True PC9_epitope_Rep6 996.62193279616 996.62082993586 86.357 2 0.10301699105563823 0.00249295147648019 0.9438714419765777 ['ENSG00000118217|ENST00000367942|ATF6'] 9227 9184 AVQEFGLARFK True NCI_RA007_Epitope_Rep3 1264.6928063206399 1264.69117490379 43.215 3 0.10301165447111924 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 95166 18272 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41211496793 75.073 1 0.10300853491714447 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 140359 15307 YYEKLHTYF True PC9_epitope_Rep1 1262.5971746003 1262.59552490379 63.699 3 0.10300740597260337 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 28480 13482 FSETISAYY True H1975_Epitope_Rep2 1079.4811417885498 1079.48004993586 56.991 2 0.10300704199392481 0.00249295147648019 0.9438714419765777 ['ENST00000480273.5_1_20:62319266-62327135:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-9|RTEL1', 'nc|ENSG00000258366|Q9NZ71|RTEL1', 'nc|ENSG00000258366|Q9NZ71-7|RTEL1', 'ENSG00000258366|ENST00000360203|RTEL1', 'nc|ENSG00000258366|Q9NZ71-2|RTEL1', 'nc|ENSG00000258366|Q9NZ71-8|RTEL1', 'nc|ENSG00000258366|Q9NZ71-4|RTEL1'] 39827 12035 HQFPFSSAL True NCI_RA007_Epitope_Rep3 1032.50288029264 1032.5017899358602 54.465 2 0.10300403545431679 0.00249295147648019 0.9438714419765777 ['ENSG00000127249|ENST00000342695|ATP13A4', 'nc|ENSG00000127249|Q4VNC1-2|ATP13A4'] 44613 12197 IPHSLPGAVAA True PC9_epitope_Rep2 1031.5763795860698 1031.5752899358602 52.228 2 0.10300251517843766 0.00249295147648019 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 102468 7256 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 33.297 2 0.10299898510187312 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 44988 18136 IQINVGTTV True PC9_epitope_Rep3 943.53384606775 943.53274993586 74.961 2 0.10296971654291084 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 94572 13188 RYIPTAAAF True PC9_epitope_Rep6 1008.5392658013599 1008.53816993586 62.372 2 0.10295786319685173 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 88433 20381 QYSPLLAAF True PC9_epitope_Rep6 1008.5280324113198 1008.52692993586 91.095 2 0.10295089644044317 0.00249295147648019 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 76264 11253 NSDNNTIFV True H1975_Epitope_Rep1 1022.46688870674 1022.46578993586 48.26 2 0.1029474139450368 0.00249295147648019 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 72461 22551 MTVDDLLSL True PC9_epitope_Rep4 1005.5052483614099 1005.5046749679301 94.981 1 0.1029455230509418 0.00249295147648019 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 92242 6762 RQKGLVEDTL True NCI_RA007_Epitope_Rep4 1157.6404363946099 1157.6393299358601 32.629 2 0.10294421833368222 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 127025 6656 VPYGVGKAA True PC9_epitope_Rep5 860.4756029156398 860.4745099358599 30.574 2 0.10293182590735747 0.00249295147648019 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 109854 16469 THMELYSQL True PC9_epitope_Rep1 1120.52229540788 1120.52118993586 68.174 2 0.10292968469149233 0.00249295147648019 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 86361 10140 QQLGKVVQV True PC9_epitope_Rep1 997.5920296502098 997.59092993586 43.879 2 0.10292578464399503 0.00249295147648019 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 103784 14997 SRFPTNVDL True PC9_epitope_Rep2 1047.53490869691 1047.53380993586 62.942 2 0.10291910538432462 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000155393|Q7Z4Q2-2|HEATR3', 'ENSG00000155393|ENST00000299192|HEATR3', 'nc|ENSG00000155393|Q7Z4Q2-3|HEATR3', 'HEATR3|p.T435Lfs*21|1|0.25|ENSG00000155393|chr16:50084577-50084577|G/-|frameshift_variant'] 123341 9312 VHVSGSPTAL True PC9_epitope_Rep5 966.51344497634 966.51234993586 40.771 2 0.10291897078452607 0.00249295147648019 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 104680 7557 STAGLIIGK True NCI_RA007_Epitope_Rep4 858.51746772762 858.51636993586 35.715 2 0.10291115740118208 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA1|p.G190R|1|0.35|ENSG00000139910|chr14:26448915-26448915|C/T|missense_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 21776 13164 ESDFSNPLY True H1975_Epitope_Rep1 1070.4556553167 1070.45507496793 55.731 1 0.1029006514046167 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 101851 9129 SPKQILDPA True PC9_epitope_Rep1 967.5338460677499 967.53274993586 39.966 2 0.10289840720476144 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant'] 88080 21660 QVVGLGLVAV True PC9_epitope_Rep2 953.5909670210499 953.58986993586 88.791 2 0.10289176164872134 0.00249295147648019 0.9438714419765777 ['ENST00000495270.1_1_9:130699601-130700099:-|nuORF', 'ENSG00000136908|ENST00000314392|DPM2'] 27659 10142 FQDDPHAGL True PC9_epitope_Rep3 998.4457593393398 998.44466993586 43.964 2 0.10288616271655529 0.00249295147648019 0.9438714419765777 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 105950 20714 SVLGAITSV True PC9_epitope_Rep3 845.48583324617 845.48528496793 84.95 1 0.10288573341811984 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 140105 21948 YVPPELITL True PC9_epitope_Rep2 1043.59029831471 1043.58920993586 89.898 2 0.10287953730414855 0.00249295147648019 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 75520 3530 NQKDPGVLDR True NCI_RA007_Epitope_Rep5 1140.58873517492 1140.5870849037901 19.447 3 0.10287393301815052 0.00249295147648019 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 25546 11094 FEQVSGVTV True H1975_Epitope_Rep3 964.4865615221598 964.48546993586 47.767 2 0.10287080051858338 0.00249295147648019 0.9438714419765777 ['ENSG00000122591|ENST00000432176|HYCC1', 'nc|ENSG00000122591|Q9BYI3-2|HYCC1'] 134887 14782 YADGESFLGY True H1975_Epitope_Rep2 1120.4713053808398 1120.47020993586 62.018 2 0.10286316848884408 0.00249295147648019 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 77282 19686 NYISGIQTI True PC9_epitope_Rep2 1007.52876068731 1007.52817496793 81.108 1 0.10286018734016271 0.00249295147648019 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 75000 16956 NLYIISVK True PC9_epitope_Rep3 948.56441792004 948.56332993586 70.382 2 0.1028587106909795 0.00249295147648019 0.9438714419765777 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000577760.1_1_17:37008851-37009031:-|nuORF', 'ENST00000584912.5_1_17:37008851-37009963:-|nuORF'] 2721 5680 AETPGTVSP True H1975_Epitope_Rep3 857.41306222873 857.4125149679301 26.876 1 0.10284401389825493 0.00249295147648019 0.9438714419765777 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 101639 13781 SPFHFQPSA True PC9_epitope_Rep5 1016.47158016436 1016.47048993586 58.028 2 0.10283244624416099 0.00249295147648019 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'PARP4|p.S1470F|1|0.13|ENSG00000102699|chr13:24434732-24434732|G/A|missense_variant', 'ENST00000446672.2_1_13:19968469-19969442:+|nuORF'] 30528 9004 GAIGSPVRL True H1975_Epitope_Rep2 868.51305105352 868.51194993586 39.585 2 0.10282911447124661 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant'] 38011 7369 HEIEGTGLP True H1975_Epitope_Rep3 951.4661604307499 951.46506993586 33.322 2 0.10280326064107127 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'NIBAN2|p.M44I|1|0.79|ENSG00000136830|chr9:127531702-127531702|C/T|missense_variant'] 14958 13007 DYQALRTSI True PC9_epitope_Rep6 1065.54547338061 1065.54436993586 61.613 2 0.10280098628884227 0.00249295147648019 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 90952 8406 RLFVGSIPK True NCI_RA007_Epitope_Rep4 1015.6178504752298 1015.61674993586 39.149 2 0.10280046386218801 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 28108 19904 FREELMEAL True PC9_epitope_Rep3 1136.5535955361597 1136.5524899358602 81.802 2 0.10279600315231123 0.00249295147648019 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 76956 20126 NVPEGLLATV True PC9_epitope_Rep4 1011.56006081559 1011.55896993586 85.549 2 0.10279595189235437 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 118908 3698 VEEPSRPSA True H1975_Epitope_Rep2 970.4719740871799 970.47086993586 19.204 2 0.10279154708820512 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'chr12:2868754-2872102|108|24.14|0.02|10.23|-|0|FOXM1,None|1', 'ENST00000545049.1_1_12:2977686-2983239:-|nuORF'] 109818 20614 THLEGVLLL True PC9_epitope_Rep1 993.5858816406098 993.58478993586 84.109 2 0.10279133058552552 0.00249295147648019 0.9438714419765777 ['ENSG00000204839|ENST00000398882|MROH6', 'MROH6|p.H353Lfs*180|1|0.11|ENSG00000204839|chr8:143570026-143570051|GAGGCCTCGCAGGTGGTGGTCGGCAT/-|frameshift_variant'] 35398 12928 GTDELRLLY True H1975_Epitope_Rep1 1078.56587447202 1078.56537496793 54.802 1 0.10279028099599077 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 6691 22177 AQAQEVFFL True PC9_epitope_Rep3 1051.53384606775 1051.53274993586 90.589 2 0.10278718380792931 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000459659.1_1_3:33863478-33868168:+|nuORF'] 31097 17446 GAYSPIVLL True H1975_Epitope_Rep3 931.53786881903 931.5373249679301 72.801 1 0.10278602942368899 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 64519 21602 LRDAVLLVF True PC9_epitope_Rep1 1044.6331661861998 1044.63206993586 87.915 2 0.10278585443777168 0.00249295147648019 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 28097 14777 FREDQIYRI True PC9_epitope_Rep1 1238.64077074778 1238.6396699358602 61.66 2 0.10278324395814611 0.00249295147648019 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 95181 18176 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41211496793 74.924 1 0.10277804783603849 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 38767 12309 HHYEGAVVIL True PC9_epitope_Rep4 1136.5978433066398 1136.5961849037901 55.159 3 0.10277736655304373 0.00249295147648019 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 17311 12028 EHDPQYAVI True PC9_epitope_Rep2 1070.50327421546 1070.5021699358601 51.582 2 0.10277367540260181 0.00249295147648019 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 29240 15151 FVDEPLIHATT True PC9_epitope_Rep4 1241.6292030045697 1241.62810993586 66.205 2 0.10276483701729039 0.00249295147648019 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 22185 8368 ETDAQSITY True H1975_Epitope_Rep3 1026.4505699362599 1026.4499749679298 37.17 1 0.10276221939100229 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 100871 11815 SLSGELREV True PC9_epitope_Rep4 988.5189242795999 988.51782993586 53.214 2 0.10275939733880679 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 132549 22619 VYPGYYLTF True PC9_epitope_Rep1 1121.54334812229 1121.5422499358601 91.813 2 0.10274615998712626 0.00249295147648019 0.9438714419765777 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 75732 6696 NQWDGTQHGV True PC9_epitope_Rep6 1140.49483479008 1140.49372993586 34.513 2 0.10274606028531705 0.00249295147648019 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 134907 13396 YADPTKRLEL True PC9_epitope_Rep5 1204.6451874218799 1204.6435349037902 56.545 3 0.10274202160468424 0.00249295147648019 0.9438714419765777 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'GTF3C5|p.P179Rfs*26|1|0.09|ENSG00000148308|chr9:133043887-133043887|C/-|frameshift_variant'] 29464 6258 FVIATSTK True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 30.75 2 0.10274196762643781 0.00249295147648019 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 21700 7798 ERYKEVAEL True PC9_epitope_Rep2 1135.5873381925899 1135.58569490379 35.366 3 0.10272865974009003 0.00249295147648019 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 19960 14795 EMDSPILGDY True H1975_Epitope_Rep1 1138.4852411928198 1138.48467496793 62.134 1 0.10270480035904969 0.00249295147648019 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 12283 8836 DISLSDYK True H1975_Epitope_Rep1 939.45492704071 939.45382993586 38.91 2 0.10270126951351391 0.00249295147648019 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 29201 22393 FVAVSLPTL True PC9_epitope_Rep1 945.5535188831699 945.55242993586 90.953 2 0.10269841916212975 0.00249295147648019 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 43874 16567 ILDEVIMGY True H1975_Epitope_Rep1 1051.5259838059899 1051.52488993586 69.1 2 0.10269728180733757 0.00249295147648019 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 31476 10179 GEELAGAIAA True H1975_Epitope_Rep3 900.4552613938798 900.45416993586 44.198 2 0.10269442693620737 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 125475 18586 VLVDAFSHV True PC9_epitope_Rep5 985.5232813840499 985.52218993586 76.516 2 0.10268904664893588 0.00249295147648019 0.9438714419765777 ['ENSG00000101413|ENST00000373433|RPRD1B'] 7026 11894 AQSESILKV True PC9_epitope_Rep3 973.54441075145 973.54330993586 50.77 2 0.10268800936508603 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 73792 10327 NHDTALTL True PC9_epitope_Rep1 883.43994568291 883.43884993586 44.606 2 0.10267427699749848 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 44616 11492 IPHSLPGAVAA True PC9_epitope_Rep4 1031.5763795860698 1031.5752899358602 51.965 2 0.10267055808261438 0.00249295147648019 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 127578 10314 VQWKVDNAL True NCI_RA007_Epitope_Rep3 1071.5712942056298 1071.57018993586 47.637 2 0.10266809180023631 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000211592|P01834|IGKC'] 58766 11431 LFLVSRSSP True H1975_Epitope_Rep2 1004.5654805492001 1004.56438993586 49.022 2 0.10266472900025168 0.00249295147648019 0.9438714419765777 ['ENST00000301764.11_1_11:61100418-61100496:-|nuORF'] 13997 19291 DRSQSWIL True PC9_epitope_Rep5 1003.5086939490699 1003.50758993586 79.246 2 0.1026564121237314 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 75841 11602 NRDLATPVM True PC9_epitope_Rep1 1015.51206507735 1015.51096993586 49.506 2 0.10265478375596195 0.00249295147648019 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 91798 10862 RPLLKAITA True PC9_epitope_Rep5 981.63350053937 981.63240993586 46.768 2 0.10265161257230832 0.00249295147648019 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 7523 13348 ASETGFLTY True H1975_Epitope_Rep2 987.4549270407099 987.45382993586 56.475 2 0.10264594222839972 0.00249295147648019 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 35595 9135 GTITTFEHA True PC9_epitope_Rep4 975.4661604307499 975.46506993586 42.728 2 0.102640869686524 0.00249295147648019 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 4096 11517 AHSPLAAQL True PC9_epitope_Rep3 906.4923156089401 906.49120993586 49.303 2 0.10262761431756241 0.00249295147648019 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 102816 20755 SQFPGAITL True PC9_epitope_Rep2 932.4967322830399 932.49618496793 85.276 1 0.10261459800299247 0.00249295147648019 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 53998 9939 KYLEERAMRQF True PC9_epitope_Rep2 1469.74491854649 1469.74327490379 43.561 3 0.10260943517474311 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 106584 5814 SVYGYGVQK True NCI_RA007_Epitope_Rep3 999.5025459394698 999.50144993586 29.848 2 0.10260671351208868 0.00249295147648019 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 43434 11128 IHSPVVNEL True PC9_epitope_Rep6 1006.54474510462 1006.54364993586 53.744 2 0.10259465065158481 0.00249295147648019 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 31163 14837 GDEELDSLIK True PC9_epitope_Rep6 1117.5502839775297 1117.54918993586 69.044 2 0.10258876913133443 0.00249295147648019 0.9438714419765777 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'nc|ENSG00000105968|Q71UI9-3|H2AZ2'] 102555 11402 SQANIAQVL True NCI_RA007_Epitope_Rep3 942.5134449763399 942.51234993586 51.972 2 0.10258813770875376 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 113355 6082 TQKSLSLSPG True NCI_RA007_Epitope_Rep4 1016.5502244078799 1016.54912993586 30.01 2 0.10258481522690727 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 95395 7519 SAINEVVTR True PC9_epitope_Rep4 987.53490869691 987.53380993586 36.289 2 0.10258291159693445 0.00249295147648019 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 103303 6300 SQTSVAERL True PC9_epitope_Rep4 989.5141732523299 989.51306993586 31.294 2 0.10257822624390754 0.00249295147648019 0.9438714419765777 ['ENSG00000171456|ENST00000375687|ASXL1'] 71098 8031 METDPQTISA True H1975_Epitope_Rep1 1091.48049016555 1091.4793899358601 35.835 2 0.10257753417401246 0.00249295147648019 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 123694 8934 VIPELNGK True PC9_epitope_Rep1 868.50181766348 868.50072993586 39.205 2 0.1025768139344738 0.00249295147648019 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 102155 13493 SPRPPLISV True PC9_epitope_Rep4 964.57056592964 964.56946993586 59.798 2 0.10256732319335048 0.00249295147648019 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 84935 12902 QHVPGSPFSV True PC9_epitope_Rep6 1053.52434401321 1053.5232499358601 61.16 2 0.10255550694079733 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 8633 16331 AVANIVNSV True PC9_epitope_Rep1 885.49198125577 885.49088993586 67.636 2 0.10254802620507736 0.00249295147648019 0.9438714419765777 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 135915 11308 YETLTITQA True H1975_Epitope_Rep2 1038.5233409536997 1038.52277496793 48.543 1 0.10254019915739852 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 46680 15603 ITVTSEVPFSK True PC9_epitope_Rep1 1206.6496040959798 1206.6485099358601 64.837 2 0.102532103766279 0.002510114284026814 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22'] 38524 6453 HHDSHSSVIL True PC9_epitope_Rep3 1130.5468703629401 1130.54521490379 29.847 3 0.10253090585146064 0.002510114284026814 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 90660 8413 RKLDVVVRF True NCI_RA007_Epitope_Rep4 1130.69241239782 1130.69077490379 39.174 3 0.10252657227984951 0.002510114284026814 0.9438714419765777 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 11862 10598 DHNGMLSV True PC9_epitope_Rep4 871.38580193507 871.38470993586 48.508 2 0.10252469453282326 0.002510114284026814 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 110024 10032 THTTPVLL True PC9_epitope_Rep6 880.5018176634799 880.50072993586 49.157 2 0.1025188526434063 0.002510114284026814 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 106573 7213 SVYDGHGGEEV True PC9_epitope_Rep4 1147.47818166643 1147.47708993586 35.05 2 0.10251108289987876 0.002510114284026814 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G'] 68786 13097 LVDPSVYGY True H1975_Epitope_Rep2 1011.49131254943 1011.49020993586 55.503 2 0.10251095504667924 0.002510114284026814 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 94605 18290 RYKLYQEMF True PC9_epitope_Rep5 1276.6274291827597 1276.62577490379 75.367 3 0.1024979529118082 0.002510114284026814 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 32464 15600 GGIDRVYEI True PC9_epitope_Rep1 1020.52400966004 1020.52290993586 64.825 2 0.10249489243853724 0.002510114284026814 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R320P|1|0.19|ENSG00000065427|chr16:75631812-75631812|C/G|missense_variant'] 73856 18738 NHFPGSFQI True PC9_epitope_Rep1 1045.49812926537 1045.4970299358602 76.865 2 0.10248948560674817 0.002510114284026814 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 97794 14009 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 58.724 2 0.1024813085348239 0.002510114284026814 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 85282 5789 QKSLSLSPG True NCI_RA007_Epitope_Rep4 915.5025459394699 915.50144993586 28.891 2 0.10247881692133327 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 105836 11561 SVIQNLRTV True PC9_epitope_Rep6 1028.5978433066398 1028.59674993586 55.575 2 0.10247793514277401 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 71058 5094 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 24.676 1 0.10247291904882815 0.002510114284026814 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 64569 11084 LRDQGGVVL True PC9_epitope_Rep3 955.5450794577898 955.5439899358599 47.632 2 0.10246707967088864 0.002510114284026814 0.9438714419765777 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.R664W|1|0.6|ENSG00000100425|chr22:49797913-49797913|T/A|missense_variant'] 109775 13713 THISDTSVVL True PC9_epitope_Rep5 1070.56078909158 1070.5596899358602 57.775 2 0.10246631851637945 0.002510114284026814 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 126593 6181 VPPPPPIAR True H1975_Epitope_Rep3 942.56508662638 942.56398993586 28.786 2 0.1024648182963653 0.002510114284026814 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 139634 14998 YTSDYFISY True H1975_Epitope_Rep1 1157.49170647225 1157.49117496793 62.935 1 0.10246448061264055 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 2765 4579 AEVDAAM[Oxidation]AA True NCI_RA007_Epitope_Rep4 863.3694835450299 863.36893496793 24.018 1 0.10245470673821451 0.002510114284026814 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 32290 17827 GFSLEELR True PC9_epitope_Rep5 949.4868958753299 949.48578993586 73.591 2 0.10245265592204857 0.002510114284026814 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF', 'ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 62169 13059 LLPHVVPGTT True PC9_epitope_Rep4 1032.59678067748 1032.59568993586 58.125 2 0.1024469087334693 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 41055 13749 HYIPRAVLL True PC9_epitope_Rep4 1080.64439957624 1080.64330993586 60.782 2 0.10243533138358082 0.002510114284026814 0.9438714419765777 ['ENSG00000037042|ENST00000251412|TUBG2', 'ENST00000589613.1_1_17:40761741-40762767:+|nuORF', 'ENST00000588056.1_1_17:40761755-40764233:+|nuORF', 'ENST00000588870.1_1_17:40811874-40817754:+|nuORF', 'ENSG00000131462|ENST00000251413|TUBG1', 'ENST00000418303.1_1_7:43958366-43959461:+|nuORF'] 69650 10703 LVVSTQTALA True H1975_Epitope_Rep1 1001.5757108797299 1001.57517496793 46.128 1 0.10242975670703881 0.002510114284026814 0.9438714419765777 ['CON__P02769'] 126869 14638 VPTNIIAA True PC9_epitope_Rep2 797.4647038787699 797.4641549679301 61.573 1 0.10242699958601763 0.002510114284026814 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 69581 11424 LVTTVTEIAG True H1975_Epitope_Rep3 1002.5597264624199 1002.55862993586 49.059 2 0.10242376926679483 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 105290 16097 STTNGGILTV True PC9_epitope_Rep2 961.50802524273 961.50692993586 67.175 2 0.10241646891921513 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 140807 14471 YYSPHGHILVL True PC9_epitope_Rep4 1297.68190728377 1297.68025490379 63.573 3 0.10241137207559016 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 86826 12495 QRPPTIVL True PC9_epitope_Rep4 922.5600012459399 922.55890993586 55.872 2 0.10240074481520677 0.002510114284026814 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 123133 8098 VHDPAGALQAA True PC9_epitope_Rep4 1048.5301576696397 1048.5290699358602 38.602 2 0.1023981743410686 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 112974 18234 TPSIPVLTA True PC9_epitope_Rep6 897.51713337445 897.51658496793 82.778 1 0.10239361304441771 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 39477 19140 HPAAFPLPV True PC9_epitope_Rep5 947.52288746123 947.5217899358599 78.657 2 0.102392968801564 0.002510114284026814 0.9438714419765777 ['ENSG00000108523|ENST00000262482|RNF167'] 114405 8688 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41837496793 38.38 1 0.10239263711211458 0.002510114284026814 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 112968 20217 TPSIPVLTA True PC9_epitope_Rep3 897.51713337445 897.51658496793 83.024 1 0.10239117206156559 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 91609 19231 RPDSFVLIL True PC9_epitope_Rep6 1058.61243074162 1058.61132993586 86.624 2 0.10238076814495986 0.002510114284026814 0.9438714419765777 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 61737 21730 LLIPIHLEV True PC9_epitope_Rep1 1045.65356727761 1045.6524699358602 88.415 2 0.10237972037686495 0.002510114284026814 0.9438714419765777 ['ENSG00000161956|ENST00000321337|SENP3', 'ENSG00000119231|ENST00000323460|SENP5'] 140835 20058 YYTDIMHTL True PC9_epitope_Rep1 1155.5270464351497 1155.52647496793 81.979 1 0.10237104401143077 0.002510114284026814 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 31015 22168 GAVDPLLAL True PC9_epitope_Rep2 867.50656869075 867.50546993586 90.757 2 0.10236476353812993 0.002510114284026814 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 76305 11355 NSDVVEQIY True H1975_Epitope_Rep2 1065.49785448185 1065.49727496793 48.726 1 0.10235708509275784 0.002510114284026814 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 43427 13641 IHSPVVNEL True PC9_epitope_Rep3 1006.54474510462 1006.54364993586 57.535 2 0.10235622323489792 0.002510114284026814 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 29792 12914 FVTFDDHD True PC9_epitope_Rep1 994.40322582102 994.40212993586 54.547 2 0.1023504923128899 0.002510114284026814 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 103368 13648 SQVPEVTTV True PC9_epitope_Rep2 958.49712620586 958.4965749679301 57.789 1 0.10234927053874616 0.002510114284026814 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 104723 12174 STDHIPILY True H1975_Epitope_Rep2 1057.54441075145 1057.54387496793 51.911 1 0.10234768276363201 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 32434 10197 GGGTGSGFTSL True H1975_Epitope_Rep3 939.42977492203 939.42922496793 44.269 1 0.1023458953578231 0.002510114284026814 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000178462|ENST00000380419|TUBAL3', 'nc|ENSG00000178462|A6NHL2-2|TUBAL3', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 102987 17939 SQISDTSVVL True PC9_epitope_Rep2 1047.5448046742702 1047.54427496793 74.307 1 0.1023393492607342 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 106511 13057 SVVPDVRSV True PC9_epitope_Rep5 956.52909504048 956.52798993586 55.23 2 0.10233804008953609 0.002510114284026814 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 95807 12689 [Acetylation]-SDFDEFER True H1975_Epitope_Rep3 1085.43016916115 1085.42957496793 54.018 1 0.10233759220974241 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 105467 8271 SVASKHAIYAV True PC9_epitope_Rep5 1144.62405805448 1144.62241490379 36.756 3 0.10233377968020421 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 43689 4465 IINSSITTK True NCI_RA007_Epitope_Rep3 975.5600608155901 975.55896993586 24.38 2 0.10233370439797425 0.002510114284026814 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 35430 7030 GTDSASGMDY True H1975_Epitope_Rep2 1002.3600406797 1002.35947496793 31.967 1 0.1023315825497419 0.002510114284026814 0.9438714419765777 ['ENSG00000109861|ENST00000227266|CTSC', 'ENST00000533897.1_1_11:88027176-88029469:-|nuORF'] 3383 12251 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep1 1043.58627587973 1043.5851699358602 52.147 2 0.10232492092094721 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 4126 15040 AHTPVIISV True PC9_epitope_Rep1 935.54401682863 935.54290993586 62.67 2 0.1023192835033611 0.002510114284026814 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 103866 11507 SRKYVIISL True NCI_RA007_Epitope_Rep2 1077.65462990677 1077.6535299358602 49.352 2 0.10231221277916304 0.002510114284026814 0.9438714419765777 ['ENST00000597244.1_1_19:16688496-16688601:-|nuORF'] 107630 18323 TAIAGLTFL True H1975_Epitope_Rep1 905.52221875489 905.52167496793 76.36 1 0.10231216583255798 0.002510114284026814 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 21662 13105 ERTSFNYAM True PC9_epitope_Rep5 1117.4862442523297 1117.4851499358601 55.413 2 0.1023116322522284 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 1165 8196 AEATGAYVP True H1975_Epitope_Rep3 877.41814760917 877.4175949679301 36.506 1 0.10230599655058592 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'nc|ENSG00000126456|Q14653-2|IRF3'] 34930 18437 GQWIAETGV True PC9_epitope_Rep2 959.4712458111899 959.47014993586 76.251 2 0.10228947627838056 0.002510114284026814 0.9438714419765777 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 28387 11533 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44417496793 49.345 1 0.10228790382075355 0.002510114284026814 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 26381 18782 FIINGIEKV True PC9_epitope_Rep5 1031.60153170475 1031.6004299358601 77.258 2 0.10228695457512832 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B'] 3915 11568 AHDGGIYAL True PC9_epitope_Rep2 915.44503106335 915.44392993586 49.821 2 0.10228055434818259 0.002510114284026814 0.9438714419765777 ['ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 43880 16537 ILDEVIMGY True H1975_Epitope_Rep3 1051.5259838059899 1051.52547496793 69.106 1 0.10227775281070652 0.002510114284026814 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 129703 16253 VTITGIVKV True PC9_epitope_Rep4 928.59571804832 928.59462993586 70.468 2 0.10227743327699985 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 22183 8390 ETDAQSITY True H1975_Epitope_Rep2 1026.4505699362599 1026.4499749679298 37.225 1 0.10227401084385326 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 101499 12479 SPAAPVITA True PC9_epitope_Rep1 825.45961849833 825.4590749679301 52.868 1 0.10227328712833211 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 117256 20498 TYYRGFLTL True PC9_epitope_Rep5 1132.59169529704 1132.5905899358602 83.885 2 0.10227140788715075 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000140025|Q9BUY7-3|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-2|EFCAB11', 'nc|ENSG00000140025|Q9BUY7-5|EFCAB11', 'ENSG00000140025|ENST00000316738|EFCAB11', 'ENST00000554761.5_1_14:90397883-90418750:-|nuORF', 'ENST00000553871.5_1_14:90263589-90418750:-|nuORF', 'nc|ENSG00000140025|Q9BUY7-6|EFCAB11', 'ENST00000556639.5_1_14:90302986-90416480:-|nuORF'] 2625 7432 AESPGVPVA True H1975_Epitope_Rep2 825.4232329896099 825.42212993586 33.532 2 0.10227096132791264 0.002510114284026814 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 75872 14679 NRDNVGLVL True PC9_epitope_Rep5 998.5508931142199 998.54978993586 61.467 2 0.10227029162085312 0.002510114284026814 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 35567 14147 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.5172549679301 62.319 1 0.10226429497015618 0.002510114284026814 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 135046 14359 YAITTLHNL True PC9_epitope_Rep6 1044.5603951687601 1044.55928993586 67.128 2 0.10226392033736177 0.002510114284026814 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000168036|ENST00000349496|CTNNB1', 'ENSG00000173801|ENST00000393931|JUP'] 24563 19945 FALPGLLHA True PC9_epitope_Rep4 937.5385375253701 937.53744993586 84.853 2 0.10226332688782787 0.002510114284026814 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 136817 15598 YITERIIAV True PC9_epitope_Rep6 1076.62299542532 1076.62188993586 72.204 2 0.10226274905607119 0.002510114284026814 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 102214 6235 SPSPPFGHSA True PC9_epitope_Rep6 982.4508447197801 982.44974993586 32.465 2 0.10226261822444932 0.002510114284026814 0.9438714419765777 ['ENSG00000141232|ENST00000499247|TOB1'] 94482 15861 RYGSDFYSM True PC9_epitope_Rep1 1124.45969515132 1124.4585899358601 65.818 2 0.10225626467870444 0.002510114284026814 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 115211 8236 TVAVPLVGK True NCI_RA007_Epitope_Rep3 882.5538532363399 882.55274993586 39.531 2 0.10225288927139849 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 47685 15177 IYPTAPPRF True PC9_epitope_Rep1 1060.5705659296398 1060.56946993586 63.199 2 0.10225096126854136 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 35017 14634 GRAPQVLVL True PC9_epitope_Rep2 951.5865503469499 951.58544993586 61.558 2 0.10223577007007513 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 17168 15630 EHAEALLL True PC9_epitope_Rep5 894.4810822188999 894.47998993586 65.131 2 0.10223238635948549 0.002510114284026814 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 138875 14556 YSDPSVVFV True H1975_Epitope_Rep3 1011.49131254943 1011.4907749679301 61.356 1 0.1022275272554754 0.002510114284026814 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF'] 139206 15926 YSVETVTLL True H1975_Epitope_Rep2 1023.5488274255499 1023.54772993586 66.46 2 0.10221618652520867 0.002510114284026814 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 40395 15046 HRTEMDWVL True PC9_epitope_Rep6 1185.5600778989299 1185.55843490379 69.913 3 0.10221400526710511 0.002510114284026814 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 37976 4011 HEGETAYIR True NCI_RA007_Epitope_Rep2 1074.5094222250598 1074.50832993586 20.24 2 0.1022118554321578 0.002510114284026814 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.R181G|1|0.17|ENSG00000136450|chr17:58005812-58005812|T/C|missense_variant'] 2798 5573 AEVEGRLPA True H1975_Epitope_Rep2 940.4977949121998 940.49668993586 26.44 2 0.10221161038877097 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000187239|Q96RU3-4|FNBP1', 'nc|ENSG00000187239|Q96RU3-3|FNBP1', 'nc|ENSG00000187239|Q96RU3-5|FNBP1', 'nc|ENSG00000187239|Q96RU3-2|FNBP1', 'ENSG00000187239|ENST00000446176|FNBP1'] 74045 13184 NHSGAVVLL True PC9_epitope_Rep1 908.50796567308 908.50686993586 55.576 2 0.10220055608951235 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 52617 5897 KQDGTIQNL True PC9_epitope_Rep6 1015.52982331647 1015.52872993586 30.948 2 0.10219108054574118 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'PDE4DIP|p.R930Sfs*80|1|0.35|ENSG00000178104|chr1:148981371-148981371|G/-|frameshift_variant', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 102543 12968 SQAIAFQQA True PC9_epitope_Rep3 962.4821448480601 962.48104993586 54.908 2 0.10219077492669566 0.002510114284026814 0.9438714419765777 ['ZCRB1|p.W185Mfs*13|1|0.31|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant', 'ENSG00000139168|ENST00000266529|ZCRB1'] 4021 4669 AHISGATSV True PC9_epitope_Rep5 841.4293809992101 841.42828993586 23.013 2 0.1021901010995281 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 25882 15745 FGIDRDAIAQA True PC9_epitope_Rep1 1175.59348620219 1175.5923899358602 65.388 2 0.1021893176677393 0.002510114284026814 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53259774-53260053:-|nuORF'] 71904 10855 MPQSGTGVSV True PC9_epitope_Rep2 961.45388149489 961.45278993586 47.072 2 0.10218597064209858 0.002510114284026814 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 86603 16834 QRDIAYVVL True PC9_epitope_Rep4 1075.6025943339098 1075.6014899358602 72.729 2 0.1021857476252738 0.002510114284026814 0.9438714419765777 ['ENSG00000108510|ENST00000397786|MED13'] 102338 6799 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48104993586 31.123 2 0.10218414537441989 0.002510114284026814 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 31723 10916 GEISALTAEA True H1975_Epitope_Rep2 960.47639076128 960.47584496793 47.019 1 0.10218334303460888 0.002510114284026814 0.9438714419765777 ['ENSG00000125968|ENST00000376112|ID1'] 89694 10087 REYAYDVPTSV True H1975_Epitope_Rep2 1298.6142812164198 1298.6131899358602 43.792 2 0.1021797388635618 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000152990|Q8IWK6-3|ADGRA3', 'ENSG00000152990|ENST00000334304|ADGRA3'] 49529 7434 KKFLKPYTL True NCI_RA007_Epitope_Rep2 1136.69576644276 1136.69413490379 33.543 3 0.10217417672244916 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000069849|P54709-2|ATP1B3', 'ENST00000465172.5_1_3:141595540-141640837:+|nuORF', 'ENSG00000069849|ENST00000286371|ATP1B3', 'ATP1B3|p.L110I|2|0.19|ENSG00000069849|chr3:141907256-141907256|C/A|missense_variant'] 126039 12921 VPAPSPLSA True PC9_epitope_Rep2 837.45961849833 837.4590749679301 54.996 1 0.1021714462581333 0.002510114284026814 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 38162 5994 HERPEFIA True NCI_RA007_Epitope_Rep4 997.4981292653698 997.49702993586 29.674 2 0.1021693271215993 0.002510114284026814 0.9438714419765777 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 4134 14959 AHTPVIISV True PC9_epitope_Rep5 935.54401682863 935.54290993586 62.542 2 0.10216926999387246 0.002510114284026814 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 100064 17021 SLKPSIETL True PC9_epitope_Rep1 986.56481184286 986.56370993586 70.295 2 0.1021673681039336 0.002510114284026814 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2', 'ASAP2|p.V238L|2|0.26|ENSG00000151693|chr2:9334763-9334763|G/T|missense_variant'] 132054 19313 VYIHGGGWAL True PC9_epitope_Rep3 1071.5501648382299 1071.5490699358602 79.51 2 0.10216138298837207 0.002510114284026814 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1'] 104299 16552 SSELFTLTY True H1975_Epitope_Rep1 1059.51244191683 1059.51187496793 69.042 1 0.10215837908427503 0.002510114284026814 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 75489 18319 NQINGSFAL True PC9_epitope_Rep4 962.48214484806 962.48104993586 78.533 2 0.10214906818014796 0.002510114284026814 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 30007 8530 FYGRHAEL True PC9_epitope_Rep5 991.4875645816699 991.48646993586 37.753 2 0.10214598532214655 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000179750|ENST00000333467|APOBEC3B'] 24257 18711 FAADIISVL True H1975_Epitope_Rep1 947.53278343859 947.5322349679301 78.028 1 0.1021434200376861 0.002510114284026814 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 97788 13707 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 57.574 2 0.10214291250391581 0.002510114284026814 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 38551 12961 HHFEGAQIL True PC9_epitope_Rep3 1050.5246783663797 1050.5235899358602 54.879 2 0.1021294705064904 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 52349 11515 KPFGQVIST True PC9_epitope_Rep5 975.5389314481899 975.53782993586 49.288 2 0.10212858919320988 0.002510114284026814 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 32742 18228 GHVVDIVAL True PC9_epitope_Rep5 921.52836676449 921.52726993586 75.126 2 0.10212422065816043 0.002510114284026814 0.9438714419765777 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 53737 8158 KYEELQIT True NCI_RA007_Epitope_Rep4 1022.5284263341399 1022.5273299358599 38.169 2 0.10212217187971295 0.002510114284026814 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 84225 5588 QEVAQVASA True H1975_Epitope_Rep2 901.4505103666098 901.44940993586 26.496 2 0.1021179044004423 0.002510114284026814 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 8863 14117 AVFPSIVGRPR True PC9_epitope_Rep3 1197.69822605425 1197.6971299358602 59.386 2 0.10211648738499426 0.002510114284026814 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 48726 4803 KENPVVVA True NCI_RA007_Epitope_Rep4 854.4861675993399 854.48506993586 24.911 2 0.1021129665510957 0.002510114284026814 0.9438714419765777 ['ENSG00000107372|ENST00000376962|ZFAND5'] 32288 17933 GFSLEELR True PC9_epitope_Rep1 949.4868958753299 949.48578993586 73.77 2 0.10211273981801627 0.002510114284026814 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF', 'ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 14798 22816 DYATIFNNL True PC9_epitope_Rep2 1069.5080252427301 1069.50747496793 93.249 1 0.10209612093258759 0.002510114284026814 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 104091 18404 SRVFSVAEL True PC9_epitope_Rep1 1006.5447451046199 1006.54364993586 75.58 2 0.1020845596187531 0.002510114284026814 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 96811 13808 SESDYIVMP True H1975_Epitope_Rep3 1039.4532127885498 1039.4526749679299 58.417 1 0.10207993505173354 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'SCARB1|p.G128S|1|0.24|ENSG00000073060|chr12:124815017-124815017|C/T|missense_variant', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1'] 97906 7531 SHMEGVASV True PC9_epitope_Rep3 915.4120166829099 915.41090993586 33.97 2 0.10207135065989854 0.002510114284026814 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 43904 20451 ILDPHVVLL True PC9_epitope_Rep2 1017.6222671493299 1017.6211699358599 84.093 2 0.1020697738576082 0.002510114284026814 0.9438714419765777 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 27654 20162 FQDDNNLYL True PC9_epitope_Rep5 1140.50875351872 1140.5076499358602 82.601 2 0.10206932873720792 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000478573.6_1_1:227381485-227504745:-|nuORF'] 92150 5948 RQAQAAGVSL True NCI_RA007_Epitope_Rep4 999.5461420869498 999.54504993586 29.499 2 0.10206252894619779 0.002510114284026814 0.9438714419765777 ['ENSG00000130052|ENST00000374599|STARD8', 'nc|ENSG00000130052|Q92502|STARD8'] 15902 6298 EDQTEYLEERR True NCI_RA007_Epitope_Rep1 1466.6637505899798 1466.6620949037901 28.526 3 0.10206229139503604 0.002510114284026814 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 72903 20696 NAVVELVTV True PC9_epitope_Rep5 942.5385970950199 942.5380449679301 84.663 1 0.10206119279873108 0.002510114284026814 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 8720 16864 AVDLTLPKV True PC9_epitope_Rep6 954.57498260374 954.57388993586 77.386 2 0.10205810979879869 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 45157 18661 IRDNFVIIY True PC9_epitope_Rep4 1151.6338944621898 1151.63278993586 79.857 2 0.10205383875953215 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 68105 6439 LTPEELER True NCI_RA007_Epitope_Rep4 985.5080252427299 985.50692993586 31.368 2 0.10204547322770066 0.002510114284026814 0.9438714419765777 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 37143 17850 GVTEVLHGL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 73.679 2 0.10204493005896446 0.002510114284026814 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1'] 57447 9232 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 40.467 2 0.10204492014337321 0.002510114284026814 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 89453 4625 REQEAREPVL True H1975_Epitope_Rep2 1225.6414990237697 1225.6398449037902 22.891 3 0.10203600128702596 0.002510114284026814 0.9438714419765777 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000572067.1_1_16:67916382-67916877:+|nuORF'] 64521 19341 LRDAVLLVF True PC9_epitope_Rep6 1044.6331661861998 1044.63206993586 87.043 2 0.10203109676570177 0.002510114284026814 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000463733.5_1_7:127230086-127231350:+|nuORF'] 75620 10954 NQSDTSVSL True PC9_epitope_Rep1 949.43525422529 949.43414993586 47.022 2 0.10201852543740968 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 126786 16521 VPSPGLPVSA True PC9_epitope_Rep5 922.5123823471799 922.51128993586 68.548 2 0.10201620176219678 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 31527 12091 GEFGDLNAV True NCI_RA007_Epitope_Rep3 920.4239612655999 920.42286993586 54.678 2 0.10201368822213687 0.002510114284026814 0.9438714419765777 ['ENSG00000080298|ENST00000617270|RFX3'] 115582 21631 TVIATNILL True PC9_epitope_Rep5 956.59063266788 956.59008496793 88.246 1 0.10200840502221081 0.002510114284026814 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'ENST00000466479.1_1_7:56130338-56130775:+|nuORF', 'nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 83722 6563 QEARPPLVSA True H1975_Epitope_Rep2 1066.5771078620598 1066.5760099358602 30.155 2 0.1020047413195879 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2'] 53865 11407 KYHGYPYSF True PC9_epitope_Rep2 1160.52909504048 1160.5279899358602 49.199 2 0.10199795456102875 0.002510114284026814 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'nc|ENSG00000104723|Q13454-2|TUSC3'] 28912 12488 FTEEQAVLY True H1975_Epitope_Rep2 1098.5233409536997 1098.52277496793 53.126 1 0.10199586912783325 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68'] 138547 13572 YRMDGHIQL True PC9_epitope_Rep5 1131.5495132152298 1131.54787490379 57.228 3 0.10199172734028411 0.002510114284026814 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 126781 16614 VPSPGLPVSA True PC9_epitope_Rep1 922.5123823471799 922.51128993586 68.732 2 0.10198307438064619 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 18768 12068 ELDPTNMTY True H1975_Epitope_Rep1 1082.45902644498 1082.45847496793 51.43 1 0.10198124138889228 0.002510114284026814 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 108517 14180 TEFPGVVV True H1975_Epitope_Rep2 846.4487194614599 846.4481749679301 59.696 1 0.10197879051695874 0.002510114284026814 0.9438714419765777 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 106985 19212 SYLERHGLINF True PC9_epitope_Rep3 1347.6935345966297 1347.69187490379 79.117 3 0.10197716696968064 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 102726 15875 SQDVTTVTL True PC9_epitope_Rep5 962.4920408254201 962.4914949679301 66.055 1 0.10197488065963824 0.002510114284026814 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 51989 7978 KLDPTKTTL True PC9_epitope_Rep1 1015.5913609438701 1015.59026993586 35.51 2 0.10197466545184844 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000522665.5_1_8:134254200-134261004:-|nuORF', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 37578 17048 GYSEHFVEF True PC9_epitope_Rep4 1113.47672511445 1113.47562993586 73.57 2 0.10196086140546258 0.002510114284026814 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 73142 6614 NEDGAEATLA True H1975_Epitope_Rep3 989.43016884485 989.4296249679301 30.394 1 0.10195336334694231 0.002510114284026814 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2', 'nc|ENSG00000136824|O95347-2|SMC2'] 132884 18062 VYTSKSDVWSF True PC9_epitope_Rep4 1317.62411762413 1317.6230299358601 77.536 2 0.10195189796585198 0.002510114284026814 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 34527 6543 GQEDHYNNL True PC9_epitope_Rep5 1088.45230127176 1088.45120993586 30.141 2 0.10193505899277529 0.002510114284026814 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 105953 20718 SVLGAITSV True PC9_epitope_Rep5 845.48583324617 845.48528496793 84.749 1 0.10193403165555574 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 102520 16726 SQADVIPAV True PC9_epitope_Rep2 898.4759968384599 898.47488993586 69.584 2 0.10192842495247915 0.002510114284026814 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 62287 18822 LLQNNLPAV True PC9_epitope_Rep2 980.5654805492 980.56438993586 77.769 2 0.10189917987906458 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF', 'ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 101580 11392 SPDVQPISA True PC9_epitope_Rep5 912.4552613938798 912.45416993586 48.817 2 0.1018967063421804 0.002510114284026814 0.9438714419765777 ['ENSG00000155903|ENST00000286364|RASA2', 'nc|ENSG00000155903|Q15283|RASA2'] 77280 20001 NYISGIQTI True PC9_epitope_Rep1 1007.52876068731 1007.52817496793 81.761 1 0.1018909605069941 0.002510114284026814 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 32673 10535 GHNAIINTL True PC9_epitope_Rep6 951.5137793295102 951.51268993586 51.315 2 0.10186314085297114 0.002510114284026814 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 47373 15897 IYIAGHPAF True PC9_epitope_Rep5 987.51780208079 987.51670993586 66.138 2 0.1018543017301916 0.002510114284026814 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 132937 18916 VYTVVDEMFL True NCI_RA007_Epitope_Rep3 1214.5893123385397 1214.58820993586 82.693 2 0.10185120905663939 0.002510114284026814 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 103808 12242 SRGFPLRL True PC9_epitope_Rep4 944.5555845718399 944.55448993586 54.906 2 0.10185055743619267 0.002510114284026814 0.9438714419765777 ['ENST00000535126.1_1_11:64084857-64084977:-|nuORF', 'nc|ENSG00000173113|Q9UI30-2|TRMT112', 'ENSG00000173113|ENST00000544844|TRMT112'] 14263 4721 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 23.528 2 0.10185006984817077 0.002510114284026814 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 123409 9272 VIDQQNGLY True H1975_Epitope_Rep1 1048.5189242795998 1048.51837496793 40.577 1 0.10184834197155512 0.002510114284026814 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 41600 23910 IDFPGGILSF True PC9_epitope_Rep1 1064.55424715916 1064.5531499358601 96.773 2 0.10184625772275899 0.002510114284026814 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 88429 21542 QYSPLLAAF True PC9_epitope_Rep4 1008.5280324113198 1008.5274749679301 91.04 1 0.10184516136225007 0.002510114284026814 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 77570 20841 NYSPYVNYF True PC9_epitope_Rep2 1165.50802524273 1165.50747496793 85.611 1 0.1018410071974767 0.002510114284026814 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 75315 14618 NPVDILTY True H1975_Epitope_Rep3 933.4807478657301 933.4801949679301 61.595 1 0.10183023793825688 0.002510114284026814 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 114823 17300 TTDFIYQLY True H1975_Epitope_Rep1 1162.55464108198 1162.5540749679299 72.004 1 0.1018298607638636 0.002510114284026814 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 33267 14576 GLAPPQHLIRV True PC9_epitope_Rep1 1199.71387611839 1199.71222490379 60.89 3 0.10182846950294784 0.002510114284026814 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53'] 6941 21761 AQLPSLLSV True PC9_epitope_Rep5 926.5436824754601 926.5431349679301 88.733 1 0.10181783493125172 0.002510114284026814 0.9438714419765777 ['ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3|QSER1'] 113792 14491 TRDSLPVSL True PC9_epitope_Rep4 986.53965972418 986.53856993586 63.65 2 0.10181489554849173 0.002510114284026814 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 8251 17995 ATINEVVQV True PC9_epitope_Rep1 971.52876068731 971.52766993586 74.01 2 0.10181454209453354 0.002510114284026814 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217', 'ZNF217|p.S275Ifs*4|1|0.32|ENSG00000171940|chr20:53582004-53582005|-/T|frameshift_variant'] 42637 4831 IETNHNLPP True H1975_Epitope_Rep3 1033.5192586327698 1033.5181699358602 23.708 2 0.10179490158526898 0.002510114284026814 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 138323 15550 YRAPEVLL True PC9_epitope_Rep2 959.5440168286299 959.54290993586 65.086 2 0.1017871948169234 0.002510114284026814 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 27761 21336 FQEEDFPAL True PC9_epitope_Rep1 1094.4920408254197 1094.49147496793 86.899 1 0.10178398982458219 0.002510114284026814 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 96175 13434 SEEFPSFGA True H1975_Epitope_Rep3 969.4079768482899 969.4074249679301 56.945 1 0.10177876648020065 0.002535676376931242 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 56063 16261 LDLDGIIAEVK True H1975_Epitope_Rep3 1184.66525416012 1184.66414993586 68.006 2 0.10177736673067132 0.002535676376931242 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 32208 21019 GFGFVLFK True PC9_epitope_Rep2 913.5061747679299 913.50506993586 86.302 2 0.10177334283163736 0.002535676376931242 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'HNRNPDL|p.A199T|1|0.1|ENSG00000152795|chr4:82428295-82428295|C/T|missense_variant', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 22242 10610 ETDNNIVVY True H1975_Epitope_Rep2 1065.4978544818498 1065.49727496793 45.834 1 0.10177096210528515 0.002535676376931242 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 25967 16736 FGVVVVGVGR True PC9_epitope_Rep1 987.5865503469497 987.58544993586 69.202 2 0.10176885426595325 0.002535676376931242 0.9438714419765777 ['ENST00000453612.1_1_7:43810757-43831091:+|nuORF', 'ENSG00000106605|ENST00000265523|BLVRA'] 35359 7653 GTAGNGWFNK True NCI_RA007_Epitope_Rep4 1050.48829285766 1050.4871899358602 36.091 2 0.10176661456517443 0.002535676376931242 0.9438714419765777 ['ENST00000525241.1_1_11:35211476-35226207:+|nuORF', 'ENST00000534296.5_1_11:35211476-35226207:+|nuORF'] 7991 3981 ATDPDDTHAY True H1975_Epitope_Rep3 1104.43598250128 1104.4348899358602 20.439 2 0.10176593287150314 0.002535676376931242 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 3921 16228 AHDGSVFTL True PC9_epitope_Rep3 945.4555957470501 945.45448993586 67.558 2 0.10176501946336343 0.002535676376931242 0.9438714419765777 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4'] 31584 10197 GEFSITYKP True NCI_RA007_Epitope_Rep5 1040.5178616504397 1040.51676993586 45.854 2 0.1017625536793539 0.002535676376931242 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 136368 11913 YHDIAQQAF True PC9_epitope_Rep2 1091.50360856863 1091.5025099358602 51.148 2 0.10176153396299994 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 32714 7412 GHSGPITSI True PC9_epitope_Rep4 867.4450310633501 867.44392993586 35.859 2 0.10175815045697192 0.002535676376931242 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF', 'PRPF19|p.F388L|1|0.17|ENSG00000110107|chr11:60898250-60898250|A/G|missense_variant'] 33867 22640 GLVPFLVSV True PC9_epitope_Rep4 929.5586042636099 929.55805496793 95.314 1 0.10175774617703895 0.002535676376931242 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 106961 20542 SYLDSVHFF True PC9_epitope_Rep4 1113.51311062317 1113.51200993586 87.165 2 0.1017462758626203 0.002535676376931242 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 21025 12737 ERATNIEVL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 54.0 2 0.10174189220508108 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 108982 7930 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46908993586 35.473 2 0.10172794775117244 0.002535676376931242 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 102949 11658 SQIPAQPSV True PC9_epitope_Rep2 925.48689587533 925.4863449679301 50.174 1 0.10172373795278195 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 785 9652 AAYYHPSYL True H1975_Epitope_Rep2 1083.5025459394699 1083.50197496793 42.107 1 0.10171704822855186 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'GSE1|p.P829Lfs*26|1|0.21|ENSG00000131149|chr16:85663456-85663457|CC/T|frameshift_variant', 'GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 102573 17771 SQANIAQVL True PC9_epitope_Rep3 942.5134449763399 942.51289496793 73.555 1 0.10171353647201843 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 17783 15210 EHVPGADIL True PC9_epitope_Rep3 949.4868958753299 949.48578993586 63.651 2 0.10170865211246137 0.002535676376931242 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 124386 5828 VLEDSDLK True NCI_RA007_Epitope_Rep2 917.4705771048499 917.46948993586 27.288 2 0.10170019930764901 0.002535676376931242 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 127895 13502 VRPGTALEL True PC9_epitope_Rep1 954.5498304850599 954.54872993586 56.791 2 0.10169599426724303 0.002535676376931242 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 35576 13295 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 62.793 2 0.10169250645986232 0.002535676376931242 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 35030 13553 GRAPQVLVL True PC9_epitope_Rep6 951.5865503469499 951.58544993586 63.862 2 0.10169111250477623 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 101657 21274 SPFQFTVGP True PC9_epitope_Rep1 978.4810822188999 978.47998993586 86.657 2 0.10169002598035981 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 39749 18396 HPYLFPVAA True PC9_epitope_Rep2 1013.5334521449298 1013.53234993586 76.091 2 0.10168838804559306 0.002535676376931242 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 43656 21777 IILPEDIEL True PC9_epitope_Rep4 1053.59577761797 1053.59468993586 91.959 2 0.10168216380596468 0.002535676376931242 0.9438714419765777 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 1241 4886 AEDLNTRVA True H1975_Epitope_Rep1 987.49852318819 987.4974299358599 23.871 2 0.1016791957162065 0.002535676376931242 0.9438714419765777 ['ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7', 'nc|ENSG00000243414|Q86XR7-2|TICAM2'] 103369 14064 SQVPEVTTV True PC9_epitope_Rep3 958.49712620586 958.49602993586 59.185 2 0.10167262450497408 0.002535676376931242 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 87668 20718 QVAVAGLLTV True PC9_epitope_Rep4 969.58588164061 969.58478993586 87.855 2 0.10167086303459005 0.002535676376931242 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 35587 10391 GTITDDVRV True PC9_epitope_Rep6 974.50327421546 974.50216993586 50.702 2 0.10166728838091382 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 138476 20858 YRGIFPVL True PC9_epitope_Rep3 963.5541875895099 963.55308993586 85.503 2 0.10166383713231587 0.002535676376931242 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 77660 6983 PAAAAAAAAAA True PC9_epitope_Rep1 825.4344663796498 825.43336993586 31.665 2 0.10166334507536105 0.002535676376931242 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 84120 17838 QEQLLAILP True H1975_Epitope_Rep3 1023.5964463243098 1023.59587496793 74.644 1 0.10165995090929825 0.002535676376931242 0.9438714419765777 ['ENSG00000171222|ENST00000305978|SCAND1'] 109948 10146 THSFGNPSI True PC9_epitope_Rep3 958.45084471978 958.44974993586 43.98 2 0.10165654593214123 0.002535676376931242 0.9438714419765777 ['ENSG00000145012|ENST00000617246|LPP', 'LPP|p.V101Dfs*24|1|0.13|ENSG00000145012|chr3:188484700-188484700|T/-|frameshift_variant'] 1927 7026 AEINHSFTP True H1975_Epitope_Rep3 1014.47705946762 1014.47596993586 31.988 2 0.10164902806698198 0.002535676376931242 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 6224 2537 APRGDGVQVSA True PC9_epitope_Rep6 1055.5359713260698 1055.5348699358601 14.688 2 0.1016476372673349 0.002535676376931242 0.9438714419765777 ['ENST00000428149.6_1_11:107436394-107436448:-|nuORF'] 8681 21654 AVDAFFTAV True PC9_epitope_Rep2 939.4701831820299 939.46908993586 88.768 2 0.10163265493579697 0.002535676376931242 0.9438714419765777 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 60078 17628 LHSLPIVSM True PC9_epitope_Rep4 995.54738795691 995.54628993586 75.827 2 0.10162927142998829 0.002535676376931242 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 2102 6544 AELPASVHA True H1975_Epitope_Rep3 893.4606811274899 893.45958993586 30.139 2 0.10162066896097795 0.002535676376931242 0.9438714419765777 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 90731 4993 RKQALQDTL True NCI_RA007_Epitope_Rep4 1071.60365696307 1071.60254993586 25.684 2 0.101620438859835 0.002535676376931242 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 84732 13198 QHGGFVVTV True PC9_epitope_Rep2 942.4923156089399 942.49120993586 56.043 2 0.10161657342440701 0.002535676376931242 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 74743 19694 NLLKLIAEV True PC9_epitope_Rep6 1011.6328318330299 1011.63172993586 88.41 2 0.10161278173482602 0.002535676376931242 0.9438714419765777 ['ENST00000479309.6_1_2:169690730-169745796:-|nuORF', 'ENSG00000152253|ENST00000282074|SPC25'] 70502 21083 LYTEAIKFF True PC9_epitope_Rep5 1130.60119735158 1130.60010993586 86.158 2 0.10160091070919595 0.002535676376931242 0.9438714419765777 ['ENSG00000038532|ENST00000409790|CLEC16A', 'nc|ENSG00000038532|Q2KHT3-2|CLEC16A'] 94827 13367 RYLTVATVF True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 58.574 2 0.10159758038661168 0.002535676376931242 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 6067 14405 APMPPIIHA True PC9_epitope_Rep2 945.51060852537 945.50950993586 60.674 2 0.10159168722325632 0.002535676376931242 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 44612 12103 IPHSLPGAVAA True PC9_epitope_Rep2 1031.5763795860698 1031.5752899358602 51.864 2 0.10156160380203785 0.002535676376931242 0.9438714419765777 ['ENSG00000160113|ENST00000291442|NR2F6'] 7188 17377 ARDETEFYL True PC9_epitope_Rep3 1142.5244035828598 1142.5233099358602 72.012 2 0.10155643440247071 0.002535676376931242 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 26731 21644 FLDGNELTL True PC9_epitope_Rep3 1020.51277627 1020.51227496793 88.552 1 0.10155071501355756 0.002535676376931242 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 1708 5582 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41284496793 26.511 1 0.10154496437793342 0.002535676376931242 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 90064 13029 RGLDIEGVKTV True PC9_epitope_Rep1 1185.67173652289 1185.6700949037902 54.985 3 0.10153760235730336 0.002535676376931242 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000471144.1_1_20:47852594-47852858:+|nuORF', 'ENST00000484427.5_1_20:47852594-47860368:+|nuORF'] 5808 19385 APFLASAVSA True PC9_epitope_Rep3 932.4967322830399 932.49562993586 79.788 2 0.10153529299905405 0.002535676376931242 0.9438714419765777 ['ENSG00000146242|ENST00000369750|TPBG', 'TPBG|p.L117Sfs*56|1|0.45|ENSG00000146242|chr6:82365309-82365327|GCTGGCGGAGCTGGCCGCG/-|frameshift_variant'] 6336 5618 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 26.612 2 0.10153006822206669 0.002535676376931242 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 6637 21640 APYPGFLSV True PC9_epitope_Rep1 949.49091862661 949.49037496793 88.065 1 0.10152449002940576 0.002535676376931242 0.9438714419765777 ['ENSG00000160447|ENST00000291906|PKN3'] 132711 20654 VYSEVAAYEF True PC9_epitope_Rep5 1176.5339056373998 1176.5333749679298 84.498 1 0.1015194405521651 0.0025611587035238013 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 21162 13843 ERDYTYEEL True PC9_epitope_Rep3 1216.5247975056798 1216.52370993586 58.329 2 0.10151884708298013 0.0025611587035238013 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'EIF2S2|p.Y298Ffs*10|1|0.14|ENSG00000125977|chr20:34089840-34089841|AG/-|frameshift_variant', 'ENSG00000125977|ENST00000374980|EIF2S2'] 83699 5533 QEAPPPPPP True H1975_Epitope_Rep1 928.4654321547598 928.46432993586 26.347 2 0.10151839331872335 0.0025611587035238013 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 90835 5922 RKVKSIVTL True NCI_RA007_Epitope_Rep4 1042.68626438822 1042.6851699358601 29.4 2 0.10151833393406241 0.0025611587035238013 0.9438714419765777 ['ENSG00000121769|ENST00000373713|FABP3'] 107438 11742 SYVNHLYVI True NCI_RA007_Epitope_Rep3 1106.5760452329 1106.57494993586 53.299 2 0.1015172886085076 0.0025611587035238013 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5', 'nc|ENSG00000136237|Q92565-2|RAPGEF5'] 107412 18209 SYTSGLETL True PC9_epitope_Rep2 969.4654917244101 969.46438993586 75.355 2 0.10151671496902849 0.0025611587035238013 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 72496 15764 MVAPAVASV True PC9_epitope_Rep3 843.4524249429099 843.45132993586 65.795 2 0.10151589012567218 0.0025611587035238013 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 132426 9336 VYNPTPNSL True NCI_RA007_Epitope_Rep3 1003.49746055903 1003.49636993586 43.819 2 0.10151536799056687 0.0025611587035238013 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 97941 19568 SHQLDFNVL True PC9_epitope_Rep1 1071.53490869691 1071.53380993586 80.093 2 0.10151536382931593 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 103478 6413 SRAPSVATV True PC9_epitope_Rep1 886.4872302285 886.48612993586 29.474 2 0.10151436870232652 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 106041 14951 SVLQQNPSL True PC9_epitope_Rep3 984.52400966004 984.52290993586 62.64 2 0.10151096758319994 0.0025611587035238013 0.9438714419765777 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 57451 9129 LEIPPPKPP True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 40.104 2 0.10150579625910262 0.0025611587035238013 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 31315 8829 GEAEAAVIEA True H1975_Epitope_Rep2 958.4607406971398 958.4601949679301 38.928 1 0.10150321342292422 0.0025611587035238013 0.9438714419765777 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 74415 11280 NIVEKLREV True PC9_epitope_Rep6 1098.6397081186199 1098.6386099358601 54.401 2 0.10150248729266109 0.0025611587035238013 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 54073 20635 KYLVIGDLLF True PC9_epitope_Rep6 1179.69034670915 1179.68924993586 92.108 2 0.10150096549284422 0.0025611587035238013 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 110449 15458 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.53308993586 64.28 2 0.10150054248909827 0.0025611587035238013 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 140797 9929 YYSHLEGARF True PC9_epitope_Rep4 1241.5829215184897 1241.58127490379 45.842 3 0.10149744690406245 0.0025611587035238013 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 87613 6954 QTVAVGVIK True NCI_RA007_Epitope_Rep4 913.5596668927699 913.55856993586 33.375 2 0.1014955613392991 0.0025611587035238013 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 77212 11782 NYIDKVRFL True NCI_RA007_Epitope_Rep4 1166.64479349906 1166.64313490379 52.292 3 0.10148651069337875 0.0025611587035238013 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 9804 13331 AYLHTTTTF True PC9_epitope_Rep3 1053.51311062317 1053.51200993586 56.312 2 0.10148155504469783 0.0025611587035238013 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 96418 10949 SEIDQVVPAA True H1975_Epitope_Rep3 1027.5185899264297 1027.51807496793 47.203 1 0.1014779364725953 0.0025611587035238013 0.9438714419765777 ['ENSG00000162607|ENST00000339950|USP1'] 106667 18679 SYAELGTTI True PC9_epitope_Rep1 953.47057710485 953.46948993586 76.638 2 0.10147397763387336 0.0025611587035238013 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 45414 9106 ISDSDYQAEY True H1975_Epitope_Rep2 1189.47751296009 1189.4764099358601 39.978 2 0.10146916209672899 0.0025611587035238013 0.9438714419765777 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3', 'nc|ENSG00000117519|Q15417-3|CNN3'] 118897 8354 VEEPQALAA True H1975_Epitope_Rep1 926.4709114580198 926.4703649679301 37.063 1 0.10146214771377743 0.0025611587035238013 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 90479 16434 RIYGKFLGL True PC9_epitope_Rep2 1065.6335005393698 1065.63240993586 68.455 2 0.1014581478849693 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'ENST00000556218.5_1_14:102349680-102375988:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 94920 7493 RYPDSHQLF True NCI_RA007_Epitope_Rep3 1161.55670677065 1161.5550749037902 36.597 3 0.10145617732873022 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 119838 6337 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51676993586 29.308 2 0.1014492303148836 0.0025611587035238013 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 2094 11907 AELNAQIITA True H1975_Epitope_Rep3 1042.56587447202 1042.56537496793 50.953 1 0.10144409272745364 0.0025611587035238013 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 123540 13109 VIIEKTYSL True PC9_epitope_Rep6 1064.61176203528 1064.6106699358602 62.041 2 0.10143531496897952 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 76171 10270 NRSNTVVIM True PC9_epitope_Rep1 1032.53861417836 1032.53750993586 44.388 2 0.10142577342242395 0.0025611587035238013 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 31482 12882 GEELSPPLP True H1975_Epitope_Rep2 937.4756624852898 937.47456993586 54.662 2 0.10142337469037346 0.0025611587035238013 0.9438714419765777 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 109506 11447 THAAQQILL True PC9_epitope_Rep2 993.5607295219299 993.55962993586 49.351 2 0.10141768213557839 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 69664 15402 LVVTNLDKL True PC9_epitope_Rep6 1013.6120963884499 1013.61098993586 71.397 2 0.10141765462018743 0.0025611587035238013 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 87680 13714 QVDFSPDMSY True H1975_Epitope_Rep2 1187.4804901655498 1187.4793899358601 57.895 2 0.10141542184566446 0.0025611587035238013 0.9438714419765777 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 104093 18258 SRVFSVAEL True PC9_epitope_Rep5 1006.5447451046199 1006.54364993586 75.243 2 0.10140813956995333 0.0025611587035238013 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 140852 22134 YYTEFPTVL True PC9_epitope_Rep1 1131.54882742555 1131.54827496793 89.951 1 0.10140508418942709 0.0025611587035238013 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 15148 12420 EAEPHPLWEY True H1975_Epitope_Rep2 1269.56660274801 1269.56550993586 52.859 2 0.10140080709079782 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 102325 6542 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 30.191 2 0.10139783297962975 0.0025611587035238013 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 1391 8329 AEEFKVPAA True H1975_Epitope_Rep3 960.4916469025998 960.49054993586 37.022 2 0.10139085462156495 0.0025611587035238013 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 116248 13851 TVVAQLKQL True PC9_epitope_Rep2 998.6124307416198 998.61132993586 58.563 2 0.10138777282908477 0.0025611587035238013 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 129301 10854 VTDSGPTFNY True H1975_Epitope_Rep1 1099.4822044177101 1099.4816749679298 46.708 1 0.1013868365976051 0.0025611587035238013 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 132469 6348 VYPARTQTL True NCI_RA007_Epitope_Rep1 1047.57129420563 1047.57018993586 28.718 2 0.10137843609104508 0.0025611587035238013 0.9438714419765777 ['ENSG00000198502|ENST00000374975|HLA-DRB5'] 26924 17847 FLGYPITL True H1975_Epitope_Rep1 922.5164050984599 922.5158549679301 74.32 1 0.10137709571035654 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 53272 14790 KTIEDDLVSA True PC9_epitope_Rep1 1089.55536935797 1089.55477496793 61.709 1 0.10137530727689721 0.0025611587035238013 0.9438714419765777 ['ENST00000544662.1_1_12:132414461-132416977:+|nuORF', 'nc|ENSG00000177192|Q9Y606-2|PUS1', 'ENSG00000177192|ENST00000376649|PUS1'] 59814 11348 LHDINAQL True PC9_epitope_Rep1 922.4872302285 922.48612993586 48.528 2 0.10135592032391486 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 135733 6519 YEKEGEFVA True H1975_Epitope_Rep3 1070.4920408254197 1070.49147496793 30.046 1 0.10135576837199159 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000414718.1_1_20:12361512-12361782:+|nuORF'] 70754 6753 MEDAKVYVA True H1975_Epitope_Rep2 1024.4899326504399 1024.4888299358602 30.89 2 0.10135338331543813 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 84604 4894 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 24.19 2 0.10135241118485681 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 47468 12707 IYKAPSENW True PC9_epitope_Rep3 1106.53965972418 1106.53856993586 53.901 2 0.101341579906226 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 35568 15527 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.5172549679301 64.735 1 0.10133632701236803 0.0025611587035238013 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 26209 7565 FHTTPNTSL True PC9_epitope_Rep6 1016.49270953176 1016.49160993586 38.373 2 0.10133476772288913 0.0025611587035238013 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 77436 13217 NYNEKIYEL True PC9_epitope_Rep6 1184.5713537752797 1184.5702499358601 62.489 2 0.10132493925339796 0.0025611587035238013 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 137299 19436 YLGPTLFL True H1975_Epitope_Rep2 922.5164050984599 922.5158549679301 80.668 1 0.1013199272904074 0.0025611587035238013 0.9438714419765777 ['ENST00000462381.1_1_7:73151257-73151715:-|nuORF', 'nc|ENSG00000106077|Q8NFV4-6|ABHD11', 'nc|ENSG00000106077|Q8NFV4-4|ABHD11', 'ENSG00000106077|ENST00000222800|ABHD11'] 138567 4510 YRPGTVALR True NCI_RA007_Epitope_Rep3 1031.5876129761098 1031.58650993586 24.592 2 0.10129584760170426 0.0025871699888281295 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'H3C13|p.H40Q|1|0.1|ENSG00000183598|chr1:149813562-149813562|G/C|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 96701 4091 SEPQEAPPKP True H1975_Epitope_Rep3 1078.5294889632999 1078.52838993586 20.862 2 0.10128450785947982 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 31708 10113 GEIPKVLVA True H1975_Epitope_Rep3 924.5644179200399 924.56332993586 43.941 2 0.10127510720487329 0.0025871699888281295 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'AP2A2-PSMD13|2|fusion', 'AP2A2-PSMD13|3|fusion', 'AP2A2-PSMD13|1|fusion', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 95659 10345 SAVPPGTSL True PC9_epitope_Rep6 827.43888305375 827.43778993586 50.507 2 0.10127382288894501 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 118079 6862 VATVSLPR True H1975_Epitope_Rep2 841.5021520166499 841.50104993586 31.314 2 0.10127230506135117 0.0025871699888281295 0.9438714419765777 ['CON__P00761'] 60049 9296 LHSESSMSL True PC9_epitope_Rep5 989.44879611445 989.44768993586 40.707 2 0.10126879046368858 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'ENSG00000131653|ENST00000326181|TRAF7'] 65280 9786 LSEINKPNFY True H1975_Epitope_Rep1 1223.61863832087 1223.61754993586 42.572 2 0.10126711852598169 0.0025871699888281295 0.9438714419765777 ['ENSG00000067334|ENST00000436063|DNTTIP2', 'DNTTIP2|p.N616Tfs*33|1|0.3|ENSG00000067334|chr1:93873174-93873174|T/-|frameshift_variant'] 81860 6254 PSIQNQIVEK True H1975_Epitope_Rep3 1154.6295373577398 1154.62844993586 29.067 2 0.10126486191777782 0.0025871699888281295 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF', 'ENST00000487650.2_1_17:19643643-19644639:-|nuORF'] 53534 15925 KVPEWVDTV True PC9_epitope_Rep4 1071.5600608155898 1071.5589699358602 69.183 2 0.10126371815820619 0.0025871699888281295 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 29244 14258 FVDEPLIHATT True PC9_epitope_Rep6 1241.6292030045697 1241.62810993586 66.734 2 0.10126293261264549 0.0025871699888281295 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 103823 15571 SRHPFLTAL True PC9_epitope_Rep1 1040.5767139392399 1040.57560993586 64.717 2 0.10126261090322573 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000142208|P31749-2|AKT1', 'ENSG00000142208|ENST00000649815|AKT1'] 63877 19423 LPVEFTIDA True PC9_epitope_Rep6 1003.52261267771 1003.52207496793 87.37 1 0.10125713171078528 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 11859 11854 DHNGMLSV True PC9_epitope_Rep1 871.38580193507 871.38470993586 50.461 2 0.1012087930225937 0.0025871699888281295 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 105901 22627 SVLDGLLYV True PC9_epitope_Rep4 977.54334812229 977.54279496793 95.263 1 0.10120842951403772 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 6078 14497 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 60.762 2 0.10120531650819067 0.0025871699888281295 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 135178 7622 YASVLTAQPR True NCI_RA007_Epitope_Rep1 1104.5927579262 1104.5916699358602 33.641 2 0.10120267628256481 0.0025871699888281295 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 97884 12808 SHLQQPLMV True PC9_epitope_Rep2 1051.54845058607 1051.5473499358602 54.567 2 0.101193006469683 0.0025871699888281295 0.9438714419765777 ['ENSG00000109787|ENST00000261438|KLF3', 'nc|ENSG00000109787|P57682-2|KLF3'] 102428 11556 SPVYVGRVV True PC9_epitope_Rep2 974.5549158654999 974.55380993586 49.775 2 0.10118838008280999 0.0025871699888281295 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 118042 12061 VATGVISTL True H1975_Epitope_Rep2 859.50148331031 859.5009349679301 51.474 1 0.10118792204961023 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL', 'ENST00000464970.1_1_7:65554274-65556745:+|nuORF'] 31634 5614 GEGSPPAVAA True H1975_Epitope_Rep3 854.4133965818999 854.41284496793 26.631 1 0.10118470721222421 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17'] 17281 11660 EHDGSLFQA True PC9_epitope_Rep1 1002.4406739589 1002.43956993586 49.728 2 0.10118376516164182 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 106832 23140 SYIALPLTL True PC9_epitope_Rep1 989.57973363101 989.57918496793 93.8 1 0.1011812818576468 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 129147 9663 VTDDIAPGY True H1975_Epitope_Rep2 949.43927697657 949.43872496793 42.15 1 0.10117446040480878 0.0025871699888281295 0.9438714419765777 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 108226 4281 TEAGAGAVAA True H1975_Epitope_Rep3 816.3977465177599 816.3971949679301 21.583 1 0.10117223564139148 0.0025871699888281295 0.9438714419765777 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 83330 21745 QALSPLLSV True PC9_epitope_Rep5 926.5436824754601 926.54258993586 88.671 2 0.10116001894908107 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 95220 10428 SAAQPLNL True H1975_Epitope_Rep2 812.43921740692 812.43812993586 45.125 2 0.10115691276639091 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 75636 16688 NQSEKIFSL True PC9_epitope_Rep1 1064.55022440788 1064.54912993586 69.018 2 0.10115317910078175 0.0025871699888281295 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426'] 138262 15745 YQVGVHYEL True PC9_epitope_Rep2 1106.5396597241802 1106.53856993586 65.833 2 0.1011528013040059 0.0025871699888281295 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 113087 19248 TPYNYPVPV True PC9_epitope_Rep2 1048.5229470308798 1048.52184993586 79.41 2 0.10114893777830755 0.0025871699888281295 0.9438714419765777 ['ENSG00000170906|ENST00000485876|NDUFA3'] 86962 7834 QRVDSPVTV True PC9_epitope_Rep6 999.5349086969098 999.53380993586 39.529 2 0.10114202980405974 0.0025871699888281295 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 24768 16614 FAYEGPMYL True H1975_Epitope_Rep1 1089.4841189940098 1089.48357496793 69.283 1 0.10113997066093981 0.0025871699888281295 0.9438714419765777 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'RNF145|p.P393Lfs*7|1|0.15|ENSG00000145860|chr5:159163023-159163023|G/-|frameshift_variant'] 43930 7794 ILEGELER True NCI_RA007_Epitope_Rep2 957.5131106231698 957.51200993586 34.945 2 0.10113764880133874 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'TPM2|p.E180K|1|0.36|ENSG00000198467|chr9:35685294-35685294|C/T|missense_variant', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 4683 13368 ALDFIASK True PC9_epitope_Rep5 863.47526856247 863.47416993586 56.436 2 0.10113726855200239 0.0025871699888281295 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 102345 6855 SPVFTSRSAA True PC9_epitope_Rep1 1021.51925863277 1021.51816993586 31.172 2 0.10113484354234298 0.0025871699888281295 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 113433 19631 TQNDIISTL True PC9_epitope_Rep5 1003.51858992643 1003.51807496793 80.564 1 0.10112917244942699 0.0025871699888281295 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 13857 6161 DRAPAQPAM True PC9_epitope_Rep5 955.45455020123 955.45344993586 28.682 2 0.10112780202967644 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 75656 19327 NQSGQVFGL True PC9_epitope_Rep3 948.4664947839199 948.46538993586 79.563 2 0.10112747777143975 0.0025871699888281295 0.9438714419765777 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 23639 21605 EYGFYHDFF True PC9_epitope_Rep1 1223.4923751785898 1223.4912699358601 87.927 2 0.10112689514123907 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000143374|Q9BW92-2|TARS2', 'ENSG00000143374|ENST00000369064|TARS2'] 107362 13846 SYSHIMALI True NCI_RA007_Epitope_Rep4 1033.52665251233 1033.52554993586 60.516 2 0.10112312559817775 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 127233 18982 VQIGDIVTV True PC9_epitope_Rep6 942.5385970950199 942.5380449679301 85.657 1 0.10112129920931304 0.0025871699888281295 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11'] 91827 13984 RPNDIMAEV True PC9_epitope_Rep1 1043.50697969691 1043.50588993586 58.628 2 0.1011178116936458 0.0025871699888281295 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 132506 5711 VYPERSTSY True PC9_epitope_Rep4 1100.51383889916 1100.51274993586 28.787 2 0.1011109285341906 0.0025871699888281295 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 134943 12200 YAEVGRVL True PC9_epitope_Rep5 905.4970666362099 905.49596993586 51.913 2 0.10110999769880005 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 47081 13617 IVVGRITEV True PC9_epitope_Rep2 984.5967806774798 984.59568993586 57.67 2 0.10109779166172142 0.0025871699888281295 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 126833 4282 VPSYPSKSA True PC9_epitope_Rep4 934.47599683846 934.47488993586 22.879 2 0.10109371853719278 0.0025871699888281295 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 127592 12437 VQYNEPLKV True PC9_epitope_Rep2 1088.5866099165999 1088.58550993586 53.145 2 0.10108933656985179 0.0025941471376938322 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 113735 15539 TRDGNVFLV True PC9_epitope_Rep2 1019.5399940773499 1019.53888993586 65.043 2 0.10108836075932326 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 88220 15888 QYASLMHSF True PC9_epitope_Rep4 1082.48551597634 1082.4844099358602 69.043 2 0.1010791073351623 0.0025941471376938322 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 132538 17146 VYPGDPLRF True PC9_epitope_Rep6 1062.5498304850598 1062.5487299358601 78.538 2 0.1010766479257171 0.0025941471376938322 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 138171 14320 YQNQGIYQV True PC9_epitope_Rep2 1111.52982331647 1111.5287299358602 60.346 2 0.10107045282800714 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 192 20507 AAFDGGFTV True PC9_epitope_Rep3 883.4075829254699 883.40703496793 84.14 1 0.10105973411444075 0.0025941471376938322 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 72059 20076 MRASSFLIV True PC9_epitope_Rep1 1022.5582869937799 1022.55718993586 82.05 2 0.10105515995173844 0.0025941471376938322 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 86832 11801 QRPPTIVL True PC9_epitope_Rep6 922.5600012459399 922.55890993586 56.581 2 0.10105218949592168 0.0025941471376938322 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 23729 21291 EYINFLENL True PC9_epitope_Rep6 1153.5655401188499 1153.56444993586 94.749 2 0.10104862543648285 0.0025941471376938322 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 39879 21312 HQILTPFLL True PC9_epitope_Rep2 1080.6331661862 1080.63206993586 87.44 2 0.10104394301437927 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 21202 14816 ERFEKTFQL True PC9_epitope_Rep1 1196.6189726740397 1196.6178699358602 61.81 2 0.10103944479363451 0.0025941471376938322 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 53525 17677 KVPEWVDTV True PC9_epitope_Rep1 1071.5600608155898 1071.5589699358602 72.789 2 0.10102774180552017 0.0025941471376938322 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 67254 12993 LTDLVPNTEY True H1975_Epitope_Rep2 1163.57101942211 1163.5704749679298 55.096 1 0.10102568745070356 0.0025941471376938322 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 104857 14956 STEQIPILY True H1975_Epitope_Rep1 1062.5597264624198 1062.55917496793 62.769 1 0.10102326667004173 0.0025941471376938322 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 106083 18764 SVMGNIIHV True PC9_epitope_Rep5 968.51133680136 968.51022993586 77.186 2 0.10101809745896514 0.0025941471376938322 0.9438714419765777 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 67256 12931 LTDLVPNTEY True H1975_Epitope_Rep3 1163.57101942211 1163.5704749679298 54.967 1 0.10100403282879364 0.0025941471376938322 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 97596 16052 SHADVVNLL True PC9_epitope_Rep2 966.51344497634 966.51234993586 67.0 2 0.1009998178174115 0.0025941471376938322 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 76943 16794 NVPDSFNEV True PC9_epitope_Rep5 1019.45598966987 1019.4554749679301 69.606 1 0.10099735045967191 0.0025941471376938322 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 139788 20433 YVDDFGVSV True PC9_epitope_Rep2 999.4549270407099 999.4543749679301 84.022 1 0.10098841234548653 0.0025941471376938322 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 72898 20678 NAVVELVTV True PC9_epitope_Rep3 942.5385970950199 942.53750993586 84.811 2 0.10098268171163123 0.0025941471376938322 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 63838 14193 LPTKDLLSA True PC9_epitope_Rep1 956.5542471591599 956.55314993586 59.416 2 0.10098222689626775 0.0025941471376938322 0.9438714419765777 ['ENSG00000168014|ENST00000334126|C2CD3', 'nc|ENSG00000168014|Q4AC94-2|C2CD3', 'nc|ENSG00000168014|Q4AC94-4|C2CD3', 'nc|ENSG00000168014|Q4AC94-1|C2CD3', 'nc|ENSG00000168014|Q4AC94-3|C2CD3', 'C2CD3|p.I477*|1|0.37|ENSG00000168014|chr11:74118319-74118319|T/-|frameshift_variant', 'ENST00000415191.6_1_11:73824618-73881837:-|nuORF', 'C2CD3|p.V1068Sfs*6|1|0.26|ENSG00000168014|chr11:74093961-74093962|AG/-|frameshift_variant'] 27061 21884 FLPDPSALQNL True PC9_epitope_Rep2 1213.6342883850098 1213.6331899358602 89.653 2 0.10096044266385637 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 100483 13032 SLPKGVVEV True PC9_epitope_Rep3 926.54368247546 926.54258993586 55.154 2 0.10095945227933484 0.0025941471376938322 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 131775 21658 VYAFNLDTF True PC9_epitope_Rep4 1088.5178616504397 1088.51676993586 91.499 2 0.10095584060877545 0.0025941471376938322 0.9438714419765777 ['ENST00000562913.5_1_16:87744798-87760508:-|nuORF', 'ENST00000566349.5_1_16:87741959-87776602:-|nuORF', 'nc|ENSG00000104731|Q8TBB5-2|KLHDC4', 'nc|ENSG00000104731|Q8TBB5-3|KLHDC4', 'ENSG00000104731|ENST00000270583|KLHDC4'] 65257 11847 LSEGVTISY True H1975_Epitope_Rep2 967.4862271689901 967.4856749679301 50.647 1 0.1009420869793672 0.0025941471376938322 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 4069 12866 AHSDAQALVL True PC9_epitope_Rep3 1023.53490869691 1023.53380993586 54.508 2 0.10093951130984292 0.0025941471376938322 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 5806 19431 APFLASAVSA True PC9_epitope_Rep1 932.4967322830399 932.49618496793 79.553 1 0.1009394620637984 0.0025941471376938322 0.9438714419765777 ['ENSG00000146242|ENST00000369750|TPBG', 'TPBG|p.L117Sfs*56|1|0.45|ENSG00000146242|chr6:82365309-82365327|GCTGGCGGAGCTGGCCGCG/-|frameshift_variant'] 105259 6427 STSSVIMMK True NCI_RA007_Epitope_Rep3 982.48273909502 982.48164993586 32.295 2 0.10093781381981674 0.0025941471376938322 0.9438714419765777 ['ENST00000521804.1_1_8:142264568-142318349:-|nuORF'] 88551 5382 RAGVLAHL True NCI_RA007_Epitope_Rep3 835.50282072299 835.50172993586 28.178 2 0.1009369439338435 0.0025941471376938322 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'MYH9|p.F762L|1|0.18|ENSG00000100345|chr22:36304099-36304099|G/C|missense_variant', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 43725 4658 IISNASC[Carbamidomethyl]TTN True NCI_RA007_Epitope_Rep2 1079.4917238350201 1079.4906299358602 22.744 2 0.1009344391948916 0.0025941471376938322 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000503632.1_1_19:47061900-47062413:+|nuORF', 'ENST00000515281.1_1_11:88141588-88141981:-|nuORF', 'ENST00000423411.2_1_6:135940529-135940997:-|nuORF'] 139669 22343 YTTDFIYQL True PC9_epitope_Rep1 1162.55464108198 1162.55354993586 90.757 2 0.10093067691901833 0.0025941471376938322 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 102831 18911 SQFPGAITL True PC9_epitope_Rep6 932.4967322830399 932.49562993586 85.386 2 0.10091384678751107 0.0025941471376938322 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 103427 22260 SQYPEIIFL True PC9_epitope_Rep4 1108.580461907 1108.57936993586 93.862 2 0.10090871320953358 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 5497 18672 AM[Oxidation]SSKFFLV True PC9_epitope_Rep5 1044.53140392004 1044.53030993586 76.843 2 0.1009080200054022 0.0025941471376938322 0.9438714419765777 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 42783 19897 IFIDKIYSI True PC9_epitope_Rep4 1110.63249747986 1110.6314099358601 84.667 2 0.1009000973778385 0.0025941471376938322 0.9438714419765777 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 75912 14164 NRDTQELLL True PC9_epitope_Rep2 1100.58258716532 1100.5814899358602 59.751 2 0.10089253950959108 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'EGFR-TEAD2|1|fusion', 'EGFR-TEAD2|3|fusion', 'EGFR-TEAD2|2|fusion', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 53753 12888 KYFDEHYEY True PC9_epitope_Rep3 1292.53496826656 1292.53333490379 54.591 3 0.10089092459027547 0.0025941471376938322 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 31715 9466 GEIQEKLLSA True NCI_RA007_Epitope_Rep5 1086.5920892198599 1086.59098993586 43.046 2 0.10089005080154367 0.0025941471376938322 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 65069 17010 LSDLGLLSY True H1975_Epitope_Rep2 979.52261267771 979.5220649679301 70.683 1 0.10088745450701171 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 7190 17333 ARDETEFYL True PC9_epitope_Rep3 1142.5244035828598 1142.52387496793 71.846 1 0.10088712321772249 0.0025941471376938322 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 46921 21227 IVLDRLIEL True PC9_epitope_Rep2 1082.66994561774 1082.6688499358602 87.109 2 0.10088659716565306 0.0025941471376938322 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 126051 11500 VPAPSPLSA True PC9_epitope_Rep6 837.45961849833 837.4590749679301 55.312 1 0.1008805012055648 0.0025941471376938322 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 19360 6643 ELNITAAK True PC9_epitope_Rep2 858.4810822188999 858.47998993586 30.961 2 0.10087680247411743 0.0025941471376938322 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 98856 23657 SIVDFLITA True PC9_epitope_Rep3 977.5433481222899 977.54224993586 96.283 2 0.10087367674072054 0.0025941471376938322 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 139314 6420 YTDM[Oxidation]ESEDY True H1975_Epitope_Rep3 1167.39140075807 1167.39087496793 29.671 1 0.1008729210678235 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 7880 7290 ATAPPAPAY True NCI_RA007_Epitope_Rep5 857.42831837005 857.4272299358599 34.717 2 0.10086904093137625 0.0025941471376938322 0.9438714419765777 ['ENSG00000135837|ENST00000367607|CEP350'] 96166 13372 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.4074249679301 56.545 1 0.10086352311407196 0.0025941471376938322 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 40179 11747 HRFPTVAV True PC9_epitope_Rep1 925.5133854066898 925.5122899358599 50.058 2 0.10086151873747277 0.0025941471376938322 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 39912 19351 HQLESILAM True PC9_epitope_Rep3 1040.5324661687598 1040.53136993586 79.655 2 0.10085093407264621 0.0025941471376938322 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 97014 9201 SEVQYIQEA True H1975_Epitope_Rep1 1065.4978544818498 1065.49727496793 40.298 1 0.10084994341826496 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 49075 10974 KFSPNTSQF True PC9_epitope_Rep1 1054.5083595959002 1054.5072699358602 47.1 2 0.10084979210471814 0.0025941471376938322 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 31001 16692 GATSLVTLL True H1975_Epitope_Rep3 873.51713337445 873.51658496793 69.727 1 0.10084360241261854 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF', 'ENSG00000227507|ENST00000429299|LTB'] 24235 18169 EYVVMTTHF True PC9_epitope_Rep1 1125.5164817514499 1125.5153899358602 74.677 2 0.10084336403116907 0.0025941471376938322 0.9438714419765777 ['GABRA3|p.A368Lfs*13|2|0.2|ENSG00000011677|chrX:152189771-152189771|C/-|frameshift_variant', 'ENSG00000022355|ENST00000393943|GABRA1', 'ENSG00000011677|ENST00000370314|GABRA3'] 89333 4654 REMDQTMAA True NCI_RA007_Epitope_Rep4 1051.44266518819 1051.4415699358601 24.32 2 0.10084321510876453 0.0025941471376938322 0.9438714419765777 ['ENST00000371870.3_1_1:47799617-47838812:+|nuORF', 'nc|ENSG00000162368|P30085|CMPK1', 'ENSG00000162368|ENST00000371873|CMPK1'] 135199 22699 YAVELFEGL True PC9_epitope_Rep2 1039.5226126777097 1039.52207496793 92.807 1 0.10083667214043907 0.0025941471376938322 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1'] 31479 12638 GEELSPPLP True H1975_Epitope_Rep2 937.4756624852898 937.47511496793 53.712 1 0.10083351112259273 0.0025941471376938322 0.9438714419765777 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 1102 6319 AEAPPGVET True H1975_Epitope_Rep3 869.41306222873 869.4125149679301 29.3 1 0.10082805712179475 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 54640 19228 LADPSAFVAA True PC9_epitope_Rep5 960.4916469025999 960.49054993586 79.0 2 0.1008239315248447 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 10811 6669 DAFPVHRV True NCI_RA007_Epitope_Rep2 939.49264996211 939.49154993586 30.553 2 0.10082367859604602 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000003096|Q9P2N7-2|KLHL13', 'ENSG00000003096|ENST00000540167|KLHL13', 'nc|ENSG00000003096|Q9P2N7-4|KLHL13', 'nc|ENSG00000003096|Q9P2N7|KLHL13', 'nc|ENSG00000003096|Q9P2N7-5|KLHL13'] 28719 22952 FSVTELIQV True PC9_epitope_Rep5 1034.5648118428599 1034.56370993586 93.273 2 0.10081789970997185 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000141905|P08651-4|NFIC', 'nc|ENSG00000141905|P08651-5|NFIC', 'nc|ENSG00000141905|P08651-3|NFIC', 'nc|ENSG00000141905|P08651-6|NFIC', 'nc|ENSG00000141905|P08651-2|NFIC', 'ENSG00000141905|ENST00000443272|NFIC'] 69088 16408 LVKDVFISA True PC9_epitope_Rep1 990.57498260374 990.57388993586 67.936 2 0.10081673466361415 0.0025941471376938322 0.9438714419765777 ['ENSG00000008018|ENST00000262193|PSMB1'] 95170 18198 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41211496793 75.209 1 0.10080901682630834 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 35936 17373 GVAPGFQVV True PC9_epitope_Rep6 872.4756029156399 872.4745099358599 79.441 2 0.10080678234087398 0.0025941471376938322 0.9438714419765777 ['ENSG00000165724|ENST00000298585|ZMYND19'] 74066 14699 NHTIYINNL True PC9_epitope_Rep3 1100.5614577979202 1100.56036993586 61.68 2 0.10080314318524898 0.0025941471376938322 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 73738 8599 NHANGLTL True PC9_epitope_Rep1 838.4297153523801 838.4291649679301 37.911 1 0.10080168607563948 0.0025941471376938322 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 14865 12073 DYFEQYGK True PC9_epitope_Rep4 1048.4501760134401 1048.44906993586 54.244 2 0.10078704692853506 0.0025941471376938322 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 103240 15934 SQSSLIHLV True PC9_epitope_Rep2 982.5447451046201 982.54364993586 66.538 2 0.100777689136161 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ACOT7|p.R364Gfs*5|1|0.24|ENSG00000097021|chr1:6264651-6264651|C/-|frameshift_variant', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 46744 20100 IVAPGTFEV True PC9_epitope_Rep3 931.5014833103099 931.5009349679301 82.566 1 0.10077590161350777 0.0025941471376938322 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 96171 13524 SEEFPSFGA True H1975_Epitope_Rep2 969.4079768482899 969.4074249679301 57.156 1 0.10077519153879909 0.0025941471376938322 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 44878 9876 IQDDAVHTL True PC9_epitope_Rep1 1010.50327421546 1010.50216993586 42.846 2 0.1007730671963373 0.0025941471376938322 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 2823 16765 AEVISLFSA True H1975_Epitope_Rep2 935.49639792987 935.49530993586 69.724 2 0.10076976015174104 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 39388 16356 HLVPEVPTV True PC9_epitope_Rep2 989.55458151233 989.55348993586 68.159 2 0.10076591045323172 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 130369 12499 VTVEKVIKI True PC9_epitope_Rep5 1027.6641319613097 1027.66302993586 53.075 2 0.10076166584047497 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 95080 10591 RYSSMAASF True PC9_epitope_Rep4 1018.4542158480599 1018.45310993586 48.48 2 0.10075749318885763 0.0025941471376938322 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 139243 5218 YTAPPLQSK True NCI_RA007_Epitope_Rep5 1003.53384606775 1003.53274993586 26.767 2 0.10075713184507581 0.0025941471376938322 0.9438714419765777 ['ENSG00000155008|ENST00000373173|APOOL'] 88895 6734 REAQSFISA True NCI_RA007_Epitope_Rep3 1007.5036085686298 1007.50250993586 33.577 2 0.10075607370701081 0.0025941471376938322 0.9438714419765777 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 48511 12077 KEFPGFLEN True NCI_RA007_Epitope_Rep1 1079.5287606873098 1079.52766993586 50.964 2 0.10074509395476917 0.0025941471376938322 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 89834 20910 RFLAATFLL True PC9_epitope_Rep4 1050.6226015025 1050.62150993586 88.59 2 0.1007432384239703 0.0025941471376938322 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2'] 22 16507 [Acetylation]-AAAAELSLLEK True H1975_Epitope_Rep1 1156.63395434814 1156.63337496793 68.865 1 0.10073920198648445 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000124802|O43324-2|EEF1E1', 'ENSG00000124802|ENST00000379715|EEF1E1'] 84634 11456 QHDPYITSI True PC9_epitope_Rep6 1072.5189242796 1072.5178299358602 55.126 2 0.10073467958101458 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 5605 10438 APAAATVAV True PC9_epitope_Rep3 769.4334037504899 769.4328549679301 45.087 1 0.10072670903335715 0.0025941471376938322 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 100249 14793 SLLQPLNV True NCI_RA007_Epitope_Rep3 882.51746772762 882.51636993586 65.611 2 0.10072258890582794 0.0025941471376938322 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546'] 30407 9677 GAFGKPSSL True PC9_epitope_Rep5 862.45486747106 862.45376993586 42.191 2 0.10071482799434726 0.0025941471376938322 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 98022 17104 SHSVFSVTI True PC9_epitope_Rep4 975.50254593947 975.50144993586 73.795 2 0.10071208344494059 0.0025941471376938322 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 115210 8153 TVAVPLVGK True NCI_RA007_Epitope_Rep3 882.5538532363399 882.55274993586 39.182 2 0.10071169906132689 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 120264 15978 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 66.712 2 0.10070985186627526 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 9133 8090 AVLSSPLSH True NCI_RA007_Epitope_Rep5 909.49198125577 909.49088993586 37.806 2 0.10070979919827837 0.0025941471376938322 0.9438714419765777 ['ENSG00000110799|ENST00000261405|VWF'] 21912 11264 ESGDLLVSY True H1975_Epitope_Rep1 981.46549172441 981.46494496793 48.303 1 0.10070874031043718 0.0025941471376938322 0.9438714419765777 ['PCDHGB2|p.D88Y|1|0.09|ENSG00000253910|chr5:141360397-141360397|G/T|missense_variant'] 32703 10649 GHSGAVMEL True PC9_epitope_Rep5 899.4171020633501 899.41600993586 45.949 2 0.1007074596045373 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40'] 102578 16688 SQANIAQVL True PC9_epitope_Rep4 942.5134449763399 942.51289496793 72.165 1 0.10070726985828869 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 138544 13679 YRMDGHIQL True PC9_epitope_Rep1 1131.5495132152298 1131.54840993586 57.47 2 0.1007042212429346 0.0025941471376938322 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 39626 10620 HPNQPLTITA True PC9_epitope_Rep1 1090.57710786206 1090.5760099358602 45.743 2 0.10070373865259294 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 46486 17974 ITPDEFHFV True PC9_epitope_Rep6 1103.5287606873098 1103.52766993586 81.764 2 0.10069947667322296 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF', 'nc|ENSG00000153827|Q14669-4|TRIP12'] 70975 6986 MEQELAHAV True H1975_Epitope_Rep3 1026.4804305958999 1026.47932993586 31.835 2 0.10069878756715125 0.0025941471376938322 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 88911 4446 RECTIEATA True NCI_RA007_Epitope_Rep3 992.4596951513198 992.45858993586 24.29 2 0.10069252439509564 0.0025941471376938322 0.9438714419765777 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 119881 14497 VEVTEFEDIK True PC9_epitope_Rep6 1207.59723416995 1207.59612993586 67.646 2 0.10065433008619873 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP'] 36427 21602 GVIGGGVFQAI True PC9_epitope_Rep2 1016.5654805491998 1016.56438993586 88.566 2 0.10064992124496369 0.0025941471376938322 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 83718 5690 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.4648849679301 26.917 1 0.10064928608613521 0.0025941471376938322 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 109535 20017 THALPIPVI True PC9_epitope_Rep5 959.5804023373499 959.57930993586 82.047 2 0.1006450597293424 0.0025941471376938322 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 23660 21554 EYGPIHILW True PC9_epitope_Rep3 1126.5811306133398 1126.58002993586 88.202 2 0.10064415623333643 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7', 'ENSG00000162627|ENST00000306121|SNX7'] 75113 10689 NMVAKVDEV True PC9_epitope_Rep1 1003.5008316873099 1003.49972993586 46.006 2 0.10064275542206638 0.0025941471376938322 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 27964 21432 FQSPPTPFL True PC9_epitope_Rep1 1032.5280324113198 1032.5269299358602 87.276 2 0.10063595540314567 0.0025941471376938322 0.9438714419765777 ['ENST00000530791.5_1_11:65687869-65688903:+|nuORF', 'ENSG00000175550|ENST00000312515|DRAP1', 'nc|ENSG00000175550|Q14919-2|DRAP1'] 32789 10105 GIDSSSPEV True PC9_epitope_Rep5 889.4028914678499 889.40234496793 43.853 1 0.10062223483198315 0.0025941471376938322 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 63449 15591 LPGVDALSNI True H1975_Epitope_Rep1 997.5444107514501 997.5438649679301 65.254 1 0.10061700422064854 0.0025941471376938322 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 136497 17945 YHISLEHEIL True PC9_epitope_Rep5 1252.64518742188 1252.6440899358602 74.043 2 0.10061293183450008 0.0025941471376938322 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant'] 9262 4589 AVQRTLLEK True NCI_RA007_Epitope_Rep4 1056.6291434349198 1056.6280499358602 24.059 2 0.10061228589492605 0.0025941471376938322 0.9438714419765777 ['ENST00000381177.6_1_X:2656215-2658842:+|nuORF', 'nc|ENSG00000292348|P14209-3|CD99', 'ENSG00000002586|ENST00000381192|CD99'] 96375 15350 SEGSPLVVLP True H1975_Epitope_Rep2 996.54916177872 996.54806993586 64.202 2 0.10061036797863968 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET'] 57446 9139 LEIPPPKPP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 40.104 2 0.1006100103091306 0.0025941471376938322 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 139794 20661 YVDDFGVSV True PC9_epitope_Rep5 999.4549270407099 999.45382993586 84.525 2 0.10060228476711346 0.0025941471376938322 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 4278 21466 AIISELVSI True PC9_epitope_Rep4 943.5589981864299 943.55790993586 90.758 2 0.10059747615495589 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 84924 11722 QHTPTSITL True PC9_epitope_Rep3 996.52400966004 996.52290993586 50.107 2 0.10059398044322668 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'SETD5|p.K832Rfs*8|1|0.2|ENSG00000168137|chr3:9464441-9464441|A/-|frameshift_variant', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF'] 2481 3729 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 19.412 2 0.10058626775148427 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 95432 9959 SALESQIR True PC9_epitope_Rep1 902.48214484806 902.48104993586 43.17 2 0.10054439642055307 0.0025941471376938322 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF', 'ENST00000478916.5_1_6:152456172-152464916:-|nuORF'] 113219 21229 TQDTNTFFL True PC9_epitope_Rep2 1085.50293986229 1085.5023749679299 87.117 1 0.10054340158534476 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 55050 21304 LALFPGVAL True PC9_epitope_Rep6 899.5480395799099 899.54694993586 94.799 2 0.10052797274090577 0.0025941471376938322 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 53423 11320 KVGPVLSV True PC9_epitope_Rep2 797.50108938749 797.49998993586 48.864 2 0.10052662885423502 0.0025941471376938322 0.9438714419765777 ['ENSG00000183696|ENST00000395564|UPP1'] 21347 5988 ERLKEAYSV True PC9_epitope_Rep2 1093.57677350889 1093.57566993586 28.419 2 0.10050622840484194 0.0025941471376938322 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 26009 4269 FHDESTQV True PC9_epitope_Rep4 961.41412485789 961.41302993586 22.823 2 0.10050289297135308 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 30126 9907 FYQEHPDL True PC9_epitope_Rep6 1047.4661604307498 1047.4650699358601 48.617 2 0.10049875951021982 0.0025941471376938322 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 105222 5967 STQTALTLK True NCI_RA007_Epitope_Rep4 961.54441075145 961.54330993586 29.57 2 0.10049859468807609 0.0025941471376938322 0.9438714419765777 ['ENSG00000172123|ENST00000304905|SLFN12'] 95584 4836 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 26.108 2 0.1004902754829634 0.0025941471376938322 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 16498 9304 EENFAVEA True H1975_Epitope_Rep2 907.3923267841499 907.39122993586 40.746 2 0.10048919817008259 0.0025941471376938322 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 75027 9129 NM[Oxidation]DNM[Oxidation]FESY True H1975_Epitope_Rep2 1181.40052635357 1181.39942993586 40.067 2 0.10048320982249362 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 126362 10710 VPLAIVNKA True PC9_epitope_Rep4 923.58040233735 923.57930993586 48.948 2 0.10048273579491875 0.0025941471376938322 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 84239 15619 QEVFPVLAA True H1975_Epitope_Rep2 972.5280324113197 972.52692993586 65.235 2 0.10048137386504984 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP'] 102628 22254 SQDAGIWYL True PC9_epitope_Rep3 1051.49746055903 1051.49636993586 90.885 2 0.10047270770521208 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 51951 5785 KKVPVSVNL True NCI_RA007_Epitope_Rep3 982.61751612206 982.61640993586 29.734 2 0.10047196697873721 0.0025941471376938322 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 130684 14648 VVDEIFNEY True H1975_Epitope_Rep2 1126.51825557326 1126.51714993586 61.502 2 0.10045609131244207 0.0025941471376938322 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 71944 19304 MPTLPPPSV True PC9_epitope_Rep3 937.49428975489 937.49318993586 79.476 2 0.10045582748210782 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 28002 19369 FQVRDIENL True PC9_epitope_Rep5 1132.58767254576 1132.58656993586 79.549 2 0.10044558551288382 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000168003|P08195-5|SLC3A2', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2', 'ENST00000535768.1_1_11:62651934-62652955:+|nuORF', 'ENST00000538682.5_1_11:62651934-62653989:+|nuORF'] 28426 9517 FSEEGAVGY True H1975_Epitope_Rep3 957.4079768482898 957.4074249679301 41.612 1 0.10044261886753444 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 39067 5000 HKVPGDVSL True NCI_RA007_Epitope_Rep3 950.5185303567799 950.51742993586 26.665 2 0.10043468113866413 0.0025941471376938322 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 35548 15708 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.5172549679301 65.244 1 0.10041914988152992 0.0025941471376938322 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 2466 6338 AEQPPHLTP True H1975_Epitope_Rep2 988.4977949122 988.49668993586 29.309 2 0.10041843734801839 0.0025941471376938322 0.9438714419765777 ['ENSG00000146733|ENST00000275605|PSPH'] 45237 17077 IRPENVIIY True PC9_epitope_Rep1 1115.6338944621898 1115.63278993586 70.513 2 0.10040941159949605 0.0025941471376938322 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 31452 9245 GEDYDERVLP True H1975_Epitope_Rep3 1191.54078192299 1191.53968993586 40.552 2 0.10040359188927564 0.0025941471376938322 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 60365 21877 LIIDEIHLL True PC9_epitope_Rep3 1077.64339651673 1077.6422899358602 89.453 2 0.10040072517047513 0.0025941471376938322 0.9438714419765777 ['ENSG00000112249|ENST00000369162|ASCC3'] 2476 8781 AEQPSELVSA True H1975_Epitope_Rep3 1029.4978544818498 1029.4967499358602 38.782 2 0.10039920976827577 0.0025941471376938322 0.9438714419765777 ['ENSG00000183155|ENST00000367262|RABIF'] 103186 13576 SQPPVQVSV True PC9_epitope_Rep2 939.5025459394699 939.50144993586 57.512 2 0.10039627675039954 0.0025941471376938322 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 76533 9378 NTDNNLAVY True H1975_Epitope_Rep2 1022.4668887067398 1022.46578993586 41.035 2 0.1003942729201108 0.0025941471376938322 0.9438714419765777 ['ENSG00000204019|ENST00000371894|CT83', 'CT83|p.D61Y|1|0.75|ENSG00000204019|chrX:116461902-116461902|C/A|missense_variant'] 108670 8495 TELISTTA True H1975_Epitope_Rep3 834.43346332014 834.4329149679301 37.661 1 0.10039316957365868 0.0025941471376938322 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 125990 10313 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.49088993586 44.614 2 0.1003918106196129 0.0025941471376938322 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 95179 18173 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41156993586 74.913 2 0.10039176980707686 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 64196 8410 LQIDNARLA True NCI_RA007_Epitope_Rep5 1012.5665431783599 1012.56544993586 39.025 2 0.10038867058611152 0.0025941471376938322 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000520711.1_1_8:41368829-41369321:+|nuORF', 'ENST00000527480.1_1_11:6015523-6015940:-|nuORF', 'ENST00000425692.6_1_17:16723399-16724021:-|nuORF', 'ENST00000417510.5_1_17:16723399-16724042:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 46181 8752 ITDHGSLIY True H1975_Epitope_Rep2 1017.51311062317 1017.51200993586 38.628 2 0.10038299631103628 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 96107 11985 SEDPTVPLP True H1975_Epitope_Rep3 953.4705771048499 953.47002496793 51.258 1 0.10038224130716043 0.0025941471376938322 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 35220 3430 GSGTAEVELKK True NCI_RA007_Epitope_Rep2 1117.59790287629 1117.5968099358602 18.0 2 0.10037230685245505 0.0025941471376938322 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 113647 6641 TRDEDHIAL True PC9_epitope_Rep2 1068.51998690876 1068.5188899358602 30.953 2 0.10037072352019814 0.0025941471376938322 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 84708 19055 QHFDTIYSIL True PC9_epitope_Rep6 1235.6186383208699 1235.61754993586 85.939 2 0.10037061839234267 0.0025941471376938322 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 135132 19490 YAQGLLTGV True PC9_epitope_Rep2 920.4967322830399 920.49562993586 80.35 2 0.10034740271098833 0.0025941471376938322 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 17688 18383 EHSLPTLGL True PC9_epitope_Rep1 965.51819600361 965.5176449679301 75.5 1 0.10034637977822093 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 12340 13107 DIVMTQSPDSL True NCI_RA007_Epitope_Rep4 1204.56455414268 1204.56344993586 57.517 2 0.10033988059602085 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000211598|P06312|IGKV4-1'] 96538 12054 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42816496793 51.447 1 0.10033651871110053 0.0025941471376938322 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 96090 10462 SEDLPLNISR True NCI_RA007_Epitope_Rep2 1142.59315184902 1142.5920499358601 45.289 2 0.10033274842389113 0.0025941471376938322 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 21220 19293 ERFNVPVSL True PC9_epitope_Rep3 1059.5712942056298 1059.57077496793 79.432 1 0.1003292779982786 0.0025941471376938322 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 38698 8732 HHSGNTYFL True PC9_epitope_Rep4 1074.48829285766 1074.4871899358602 41.093 2 0.10032769258661817 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 110186 15873 TIDPSNPMV True PC9_epitope_Rep3 972.45863252216 972.45752993586 66.204 2 0.10032698654556502 0.0025941471376938322 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 74176 7309 NHYSESTEL True PC9_epitope_Rep5 1078.45671794586 1078.45562993586 33.076 2 0.10032629476770244 0.0025941471376938322 0.9438714419765777 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'ENST00000443361.1_1_9:108285096-108287232:+|nuORF'] 43085 10681 IGLFGGAGVGK True H1975_Epitope_Rep3 974.5549158654998 974.55380993586 46.16 2 0.10032201493775565 0.0025941471376938322 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 116611 21350 TYGPSFPAF True PC9_epitope_Rep2 985.4545331178899 985.4539849679301 87.59 1 0.1003191108243628 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'RALGAPB|p.V262F|1|0.49|ENSG00000170471|chr20:38509120-38509120|G/T|missense_variant'] 109614 18594 THDGGFLSL True PC9_epitope_Rep5 945.45559574705 945.45448993586 76.546 2 0.10031860483392936 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 130743 10982 VVDPNDPQM True PC9_epitope_Rep3 1013.44879611445 1013.44768993586 47.228 2 0.10031593143127913 0.0025941471376938322 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 126042 12274 VPAPSPLSA True PC9_epitope_Rep4 837.45961849833 837.4590749679301 55.028 1 0.10031443541337523 0.0025941471376938322 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 34516 6549 GQEDHYNNL True PC9_epitope_Rep1 1088.45230127176 1088.45120993586 29.996 2 0.10030484416068391 0.0025941471376938322 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 130749 9232 VVDPNDPQM True PC9_epitope_Rep6 1013.44879611445 1013.44768993586 45.657 2 0.10030152244135483 0.0025941471376938322 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 39140 6381 HLDTLTEHY True H1975_Epitope_Rep3 1127.52473793603 1127.52364993586 29.522 2 0.10029580591628388 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 88998 3980 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 20.435 2 0.10029517422391386 0.0025941471376938322 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 128343 13969 VSDMVEDLY True H1975_Epitope_Rep2 1069.4637774722498 1069.46268993586 58.879 2 0.10029203993664759 0.0025941471376938322 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 85610 19795 QLNGILLHL True PC9_epitope_Rep4 1019.6127650947899 1019.61166993586 84.267 2 0.10029142149583496 0.0025941471376938322 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 96126 8076 SEDVPYTAA True H1975_Epitope_Rep2 951.41854153199 951.4179949679301 36.011 1 0.10028981199653524 0.0025941471376938322 0.9438714419765777 ['ENSG00000071553|ENST00000369762|ATP6AP1'] 45239 16251 IRPENVIIY True PC9_epitope_Rep2 1115.6338944621898 1115.63278993586 67.752 2 0.10028548435828477 0.0025941471376938322 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 76396 14703 NSLKQLYTV True PC9_epitope_Rep1 1064.5866099165999 1064.58550993586 61.375 2 0.10028430474323884 0.0025941471376938322 0.9438714419765777 ['ENSG00000135372|ENST00000257829|NAT10', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 32144 4738 GFAGDDAPR True NCI_RA007_Epitope_Rep1 904.40389452736 904.40278993586 22.51 2 0.10028010012471913 0.0025941471376938322 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 102518 17068 SQADVIPAV True PC9_epitope_Rep1 898.4759968384599 898.47488993586 70.477 2 0.10027464163195828 0.0025941471376938322 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 95563 6334 SASGPLHSV True PC9_epitope_Rep1 853.4293809992101 853.42828993586 29.175 2 0.10027300629927337 0.0025941471376938322 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 96439 10871 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 46.845 1 0.10027070005838447 0.0025941471376938322 0.9438714419765777 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 8345 16495 ATLSKIIQV True PC9_epitope_Rep1 971.6015317047498 971.60042993586 68.273 2 0.1002681858311093 0.0025941471376938322 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 133211 6350 WEDDKVTEA True H1975_Epitope_Rep3 1091.4771190372699 1091.47657496793 29.417 1 0.1002629015692878 0.0025941471376938322 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 103124 8062 SQLSMKAAL True NCI_RA007_Epitope_Rep3 947.51100244819 947.50990993586 38.798 2 0.10026261060631948 0.0025941471376938322 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001'] 15198 8932 EAFNM[Oxidation]IDQNR True PC9_epitope_Rep1 1252.5506357944798 1252.5495299358602 39.198 2 0.10025783291213679 0.0025941471376938322 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 6308 6038 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 28.618 2 0.1002538268312321 0.0025941471376938322 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 132760 16834 VYSPHVLNL True PC9_epitope_Rep2 1040.5654805492 1040.5643899358602 70.001 2 0.10025258851414728 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 13882 6835 DRDPASGTAL True PC9_epitope_Rep2 1001.47778774361 1001.47668993586 31.695 2 0.10025169339526223 0.0025941471376938322 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 106064 22517 SVLVNDFFL True PC9_epitope_Rep4 1052.55424715916 1052.5531499358601 94.843 2 0.10025133424580741 0.0025941471376938322 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E'] 69377 13465 LVQGELVTA True PC9_epitope_Rep4 928.5229470308799 928.52239496793 59.69 1 0.10025017780998416 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1'] 34799 7224 GQTGVIRSV True PC9_epitope_Rep5 915.5137793295099 915.51268993586 32.751 2 0.10024981533975387 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 4132 13549 AHTPVIISV True PC9_epitope_Rep4 935.54401682863 935.54290993586 60.011 2 0.10024395410732816 0.0025941471376938322 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 140534 20748 YYLGNPAEF True PC9_epitope_Rep5 1072.48656152216 1072.48597496793 84.865 1 0.10023454404916382 0.0025941471376938322 0.9438714419765777 ['ENSG00000049449|ENST00000054950|RCN1', 'nc|ENSG00000049449|Q15293-2|RCN1'] 84549 13021 QHAVEAISL True PC9_epitope_Rep5 966.5134449763399 966.51234993586 55.09 2 0.10022905618017662 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 117152 13196 TYSPALNKM[Oxidation]F True PC9_epitope_Rep5 1186.5692459807399 1186.5681499358602 55.765 2 0.1002244719923141 0.0025941471376938322 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 139758 10694 YVADLVHSA True PC9_epitope_Rep4 973.4868958753299 973.48578993586 48.888 2 0.10022303949264476 0.0025941471376938322 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 23833 19125 EYLLKVNEI True PC9_epitope_Rep5 1119.61757569171 1119.61646993586 78.599 2 0.10021607345388066 0.0025941471376938322 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 65750 22381 LSIEQLTTL True PC9_epitope_Rep1 1016.5753765265599 1016.57426993586 90.904 2 0.10021607034567716 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 7219 12260 ARDNTINLI True PC9_epitope_Rep6 1028.56145779792 1028.56036993586 58.539 2 0.1002135819515175 0.0025941471376938322 0.9438714419765777 ['ENSG00000163466|ENST00000315717|ARPC2'] 37490 14405 GYEPPVQESV True PC9_epitope_Rep5 1103.51350454599 1103.51297496793 60.408 1 0.10019884440267221 0.0025941471376938322 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 32706 10755 GHSGDVMSL True PC9_epitope_Rep3 901.3963666187701 901.39526993586 46.322 2 0.1001981722099031 0.0025941471376938322 0.9438714419765777 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'GNB2|p.A181V|1|0.43|ENSG00000172354|chr7:100678142-100678142|C/T|missense_variant', 'ENSG00000114450|ENST00000232564|GNB4'] 70775 7490 MEEEPTHLP True H1975_Epitope_Rep3 1081.4750108622898 1081.47390993586 33.791 2 0.10018510209675913 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 5588 13055 ANTFVAELK True PC9_epitope_Rep3 991.5338460677499 991.53274993586 55.244 2 0.10017191915793948 0.0025941471376938322 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 96248 8897 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42816496793 39.192 1 0.10016711568739 0.0025941471376938322 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 83675 4791 QEALAKGDVTA True H1975_Epitope_Rep3 1101.56660274801 1101.56550993586 23.555 2 0.10016230748492881 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-4|SOD2'] 39542 18398 HPFPGPGLAI True PC9_epitope_Rep2 1004.5443511817998 1004.54324993586 76.099 2 0.1001597629047837 0.0025941471376938322 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 8340 5922 ATLQNVLRK True NCI_RA007_Epitope_Rep4 1041.6294777880898 1041.62838993586 29.4 2 0.10015917622087596 0.0025941471376938322 0.9438714419765777 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1'] 139372 5324 YTDVSTRY True H1975_Epitope_Rep2 1003.46107505031 1003.46057496793 25.532 1 0.1001535832457827 0.0025941471376938322 0.9438714419765777 ['ENST00000436507.2_1_9:37885847-37886384:+|nuORF', 'nc|ENSG00000213593|Q9Y320-2|TMX2', 'ENSG00000213593|ENST00000278422|TMX2'] 89413 8487 RENPNLVMPP True H1975_Epitope_Rep3 1165.5913780272099 1165.59028993586 37.631 2 0.10015343200432027 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 54722 6021 LAELEQER True H1975_Epitope_Rep3 986.50327421546 986.50216993586 28.172 2 0.10015099884547417 0.0025941471376938322 0.9438714419765777 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4'] 125049 15880 VLPGHFNTF True PC9_epitope_Rep2 1030.5236157372199 1030.5225099358602 66.338 2 0.10014254919104963 0.0025941471376938322 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 102735 20225 SQDYPTLAF True PC9_epitope_Rep4 1040.48147614172 1040.48097496793 85.935 1 0.10014171112865156 0.0025941471376938322 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 8767 9924 AVEFNFGQK True NCI_RA007_Epitope_Rep2 1038.5134449763398 1038.5123499358601 43.228 2 0.10014167707783363 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000468690.2_2_1:245021279-245021477:-|nuORF'] 85559 9863 QLLGSAHEV True PC9_epitope_Rep5 952.4977949122001 952.49668993586 42.908 2 0.10013630446386595 0.0025941471376938322 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 48799 3023 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 15.949 2 0.10012509059068872 0.0025941471376938322 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 45214 17596 IRKPYIWEY True PC9_epitope_Rep3 1266.67609362734 1266.6749899358601 72.87 2 0.1001249619516747 0.0025941471376938322 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 83125 21252 PYPQYFTQL True PC9_epitope_Rep3 1155.5600608155898 1155.5589699358602 87.039 2 0.10012127721732723 0.0025941471376938322 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1'] 65109 13562 LSDPAGAIIYT True H1975_Epitope_Rep2 1119.5811901829898 1119.58008993586 57.303 2 0.1001187319418776 0.0025941471376938322 0.9438714419765777 ['ENSG00000178921|ENST00000314666|PFAS'] 97903 6357 SHMEGVASV True PC9_epitope_Rep2 915.4120166829099 915.41090993586 29.856 2 0.10011666307717196 0.0025941471376938322 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 48535 4889 KEFPSQASP True NCI_RA007_Epitope_Rep4 989.4818104948898 989.48070993586 25.256 2 0.10011662608848276 0.0025941471376938322 0.9438714419765777 ['ENSG00000138641|ENST00000402738|HERC3', 'ENST00000506714.5_1_4:89300148-89319290:+|nuORF', 'nc|ENSG00000138642|Q8IVU3-3|HERC6', 'nc|ENSG00000287542|Q15034-2|HERC3', 'ENSG00000138642|ENST00000264346|HERC6', 'nc|ENSG00000138642|Q8IVU3-2|HERC6'] 110151 19758 TIDDGIFEV True PC9_epitope_Rep6 1007.48114178855 1007.48057496793 88.659 1 0.10011659538767016 0.0025941471376938322 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 1895 13489 AEILELAGNAA True H1975_Epitope_Rep1 1070.5607890915799 1070.56027496793 57.004 1 0.10008369728003766 0.0025941471376938322 0.9438714419765777 ['ENSG00000099284|ENST00000373255|MACROH2A2', 'nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF', 'ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 103917 18227 SRMPVSIDL True PC9_epitope_Rep5 1016.5324661687599 1016.53136993586 75.122 2 0.10008254238401422 0.0025941471376938322 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 135645 5501 YEEVHDLER True NCI_RA007_Epitope_Rep2 1188.54111627616 1188.53947490379 26.016 3 0.10007375346576809 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF', 'nc|ENSG00000205531|Q99733-2|NAP1L4', 'ENSG00000205531|ENST00000380542|NAP1L4'] 32589 9919 GHDASQITL True PC9_epitope_Rep1 940.46140940348 940.46030993586 43.013 2 0.10006916857162171 0.0025941471376938322 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 75921 7051 NRDVPNETL True PC9_epitope_Rep2 1056.51998690876 1056.5188899358602 32.52 2 0.10006547937648978 0.0025941471376938322 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 28850 10333 FTDPGQVAY True H1975_Epitope_Rep3 996.4552613938799 996.45416993586 44.798 2 0.10006258579297997 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 25215 10227 FEALEKIAA True H1975_Epitope_Rep2 990.5385970950198 990.53750993586 44.343 2 0.10005443715903943 0.0025941471376938322 0.9438714419765777 ['ENST00000488824.1_1_1:110279695-110282569:-|nuORF', 'ENSG00000134202|ENST00000361066|GSTM3', 'GSTM3|p.R191L|1|0.25|ENSG00000134202|chr1:109737464-109737464|C/A|missense_variant'] 6271 8518 APRPTIINA True PC9_epitope_Rep2 951.5501648382299 951.54906993586 38.127 2 0.10005288542635901 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 71986 15649 MQAERIFSEV True PC9_epitope_Rep6 1208.5859582936 1208.58486993586 72.398 2 0.10005201282943985 0.0025941471376938322 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 26533 18031 FIVEEIQRI True PC9_epitope_Rep6 1145.6444591458899 1145.6433699358602 81.985 2 0.10004093970963449 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 31616 11138 GEGLESYVA True H1975_Epitope_Rep3 923.4236269124299 923.42307496793 47.938 1 0.10003912266571875 0.0025941471376938322 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 28819 10132 FTDGQQLY True H1975_Epitope_Rep2 970.43961132974 970.4390649679301 43.971 1 0.10003644156152212 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 85279 6225 QKSLSLSPG True NCI_RA007_Epitope_Rep2 915.5025459394699 915.50144993586 28.82 2 0.10003553668026417 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 102158 14918 SPRPPLISV True PC9_epitope_Rep5 964.57056592964 964.56946993586 62.387 2 0.10003550531091604 0.0025941471376938322 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 64055 13909 LQDPSAIKI True PC9_epitope_Rep2 983.5651461960299 983.56404993586 58.78 2 0.1000311409574684 0.0025941471376938322 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 75875 12479 NRDNVGLVL True PC9_epitope_Rep6 998.5508931142199 998.54978993586 59.422 2 0.10003078639616123 0.0025941471376938322 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 89136 5472 REFSGPSTP True NCI_RA007_Epitope_Rep4 976.4614094034798 976.46030993586 27.632 2 0.10003044156058456 0.0025941471376938322 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'ENST00000525875.1_1_11:62201326-62284770:-|nuORF'] 95455 20450 SALPFITYL True H1975_Epitope_Rep2 1023.5640835668698 1023.5635749679301 84.724 1 0.10002869615401229 0.0025941471376938322 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 86501 15507 QRAAVIGDVI True PC9_epitope_Rep5 1040.5978433066398 1040.59674993586 64.657 2 0.10002510397934336 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 40026 4392 HQVEQTEL True NCI_RA007_Epitope_Rep5 982.4719740871799 982.47086993586 23.521 2 0.10001573359773894 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 88209 12548 QYAPSTAQF True PC9_epitope_Rep6 1011.4661604307499 1011.46506993586 59.702 2 0.10001268837943769 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 26925 17992 FLGYPITL True H1975_Epitope_Rep2 922.5164050984599 922.5158549679301 74.535 1 0.10000914474387056 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 23002 15679 EVISKLYAV True PC9_epitope_Rep2 1020.5855472874398 1020.5849749679301 65.586 1 0.10000902800767551 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 112918 22864 TPQSIFIFA True PC9_epitope_Rep1 1022.5436824754598 1022.5431749679301 92.739 1 0.10000366309331732 0.0025941471376938322 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 35009 10961 GRAPGGLSL True PC9_epitope_Rep5 826.4661008611 826.4650099358599 47.151 2 0.09999483636726067 0.0025941471376938322 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 114798 12662 TTDDPALLY True H1975_Epitope_Rep1 1007.4811417885498 1007.48057496793 53.759 1 0.0999943127524714 0.0025941471376938322 0.9438714419765777 ['ENSG00000182749|ENST00000675840|PAQR7'] 48207 14313 KAYTSQFVSL True PC9_epitope_Rep6 1142.5971746003 1142.5960699358602 66.952 2 0.09999352752924709 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 109830 17631 THLGPLASL True PC9_epitope_Rep3 907.51271670035 907.51160993586 73.009 2 0.09997221824830176 0.0025941471376938322 0.9438714419765777 ['ENSG00000127399|ENST00000359623|LRRC61'] 13927 19036 DRFFSEYEKL True PC9_epitope_Rep3 1332.6350166609998 1332.6339099358602 78.443 2 0.09997107941341869 0.0025941471376938322 0.9438714419765777 ['ENSG00000135932|ENST00000258418|CAB39'] 13969 17268 DRNAVIVAL True PC9_epitope_Rep5 969.5607295219299 969.55962993586 71.432 2 0.09996540958892523 0.0025941471376938322 0.9438714419765777 ['PTGES3-UBE2K|1|fusion', 'nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K'] 97799 12747 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 54.337 2 0.09995547815454356 0.0025941471376938322 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 113804 6633 TRDSVKTVL True PC9_epitope_Rep3 1017.58185888933 1017.58076993586 30.537 2 0.09995166202514076 0.0025941471376938322 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 34859 9319 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42828993586 40.798 2 0.0999439810676529 0.0025941471376938322 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 11736 5810 DHHENKYLL True PC9_epitope_Rep4 1167.56727145435 1167.56563490379 29.206 3 0.0999292567603608 0.0025941471376938322 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 7779 4867 ASVNTLVNK True NCI_RA007_Epitope_Rep5 944.52909504048 944.52798993586 25.414 2 0.09992814052092783 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 105447 13469 SVAQDIPKL True PC9_epitope_Rep6 969.5494961318899 969.54838993586 63.503 2 0.09992773137791325 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000108861|P51452-2|DUSP3', 'ENSG00000108861|ENST00000226004|DUSP3'] 70806 10949 MEENFAVEA True H1975_Epitope_Rep1 1038.4328116971399 1038.43227496793 47.079 1 0.09992394992740225 0.0025941471376938322 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 92291 11009 RQLETLGQEKL True PC9_epitope_Rep3 1313.7303140281695 1313.72866490379 47.337 3 0.0999203906984361 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 14947 9078 DYPLEAVR True H1975_Epitope_Rep1 961.48689587533 961.48578993586 39.823 2 0.09991761718099175 0.0025941471376938322 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 103439 6834 SRAAEKLYL True PC9_epitope_Rep6 1049.58694426977 1049.58584993586 35.15 2 0.0999089655620217 0.0025941471376938322 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9', 'nc|ENSG00000143742|P49458-2|SRP9'] 139423 13664 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep2 1147.5107280451098 1147.51017496793 57.698 1 0.09990314705295819 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 9812 13090 AYLHTTTTF True PC9_epitope_Rep5 1053.51311062317 1053.51200993586 55.355 2 0.09988672641468746 0.0025941471376938322 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 37721 11450 HASDRIIAL True PC9_epitope_Rep1 994.5559784946599 994.55488993586 48.92 2 0.09988236993595667 0.0025941471376938322 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 28518 8904 FSHAQTVVL True NCI_RA007_Epitope_Rep2 1000.5341804209199 1000.53308993586 39.261 2 0.09987949968523191 0.0025941471376938322 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 68729 11243 LVDGDTLSY True H1975_Epitope_Rep3 981.46549172441 981.46494496793 48.349 1 0.0998757767463382 0.0025941471376938322 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3', 'ENST00000550564.1_1_12:53468877-53473168:-|nuORF'] 31867 6448 GEQEGAMVAA True H1975_Epitope_Rep3 961.4174959861698 961.41694496793 29.776 1 0.09987451441818114 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 25629 11326 FEVQVGPEA True H1975_Epitope_Rep3 974.4709114580198 974.46980993586 48.674 2 0.09987392794755395 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 17534 7789 EHINSVSAM True PC9_epitope_Rep3 986.44913046762 986.44802993586 34.955 2 0.099872714409254 0.0025941471376938322 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 90973 21552 RLIALLEVL True PC9_epitope_Rep4 1038.68011637862 1038.6790099358602 91.081 2 0.09987198908990554 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 34705 19329 GQMGSFIRL True PC9_epitope_Rep1 1007.5222358382299 1007.52112993586 79.155 2 0.09986483170678487 0.0025941471376938322 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 119987 18112 VFAGVFNTF True NCI_RA007_Epitope_Rep5 1000.50181766348 1000.50072993586 76.472 2 0.09986422741599164 0.0025941471376938322 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 47181 18958 IYADLNQNDF True PC9_epitope_Rep4 1211.5458673034302 1211.5447699358601 81.009 2 0.09986226862768073 0.0025941471376938322 0.9438714419765777 ['ENSG00000064763|ENST00000536681|FAR2'] 115819 14140 TVMDSKIVQV True PC9_epitope_Rep2 1118.60054572858 1118.59944993586 59.66 2 0.09984820148276889 0.0025941471376938322 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 9033 18424 AVIGDVIRV True PC9_epitope_Rep5 940.57056592964 940.56946993586 75.888 2 0.09983917588137553 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 95260 11229 SADPNVVDL True H1975_Epitope_Rep1 928.45017601344 928.44962496793 48.166 1 0.09982507326442897 0.0025941471376938322 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 24115 5018 EYSKQMQRF True NCI_RA007_Epitope_Rep5 1215.57064258263 1215.56899490379 26.004 3 0.09982449510550936 0.0025941471376938322 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 33345 8644 GLDVEDVK True PC9_epitope_Rep2 873.4443623570099 873.44326993586 38.615 2 0.09982259440052062 0.0025941471376938322 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 8337 7601 ATLQEALAH True NCI_RA007_Epitope_Rep5 952.4977949121999 952.49668993586 35.934 2 0.09982123041410022 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 96459 7798 SEIQGLRTV True NCI_RA007_Epitope_Rep4 1001.55055876105 1001.54946993586 36.678 2 0.09981553730864412 0.0025941471376938322 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF', 'ENST00000381017.6_1_9:13106966-13119674:-|nuORF'] 43433 13445 IHSPVVNEL True PC9_epitope_Rep5 1006.54474510462 1006.54364993586 56.732 2 0.09980653838551358 0.0025941471376938322 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 64017 5279 LQDAEIAR True PC9_epitope_Rep2 914.4821448480599 914.48104993586 25.694 2 0.09980421472401403 0.0025941471376938322 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 94900 9473 RYPDRITLI True NCI_RA007_Epitope_Rep3 1145.65569253593 1145.65405490379 44.364 3 0.09979409152150354 0.0025941471376938322 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 46781 12308 IVDEAIYY True H1975_Epitope_Rep1 984.4804135125601 984.4798649679301 52.37 1 0.0997915660717723 0.0025941471376938322 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 46267 5664 ITDVKPGNY True H1975_Epitope_Rep2 1005.51311062317 1005.51200993586 26.784 2 0.09978850042203136 0.0025941471376938322 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX', 'ENST00000513319.5_1_5:121402440-121412860:-|nuORF', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3', 'ENSG00000115318|ENST00000264094|LOXL3'] 89445 11684 REQDLILAV True NCI_RA007_Epitope_Rep3 1055.5975089534697 1055.59640993586 53.075 2 0.09978403599440439 0.0025941471376938322 0.9438714419765777 ['ENSG00000177303|ENST00000321617|CASKIN2'] 96437 10620 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 45.874 1 0.09978355826992963 0.0025941471376938322 0.9438714419765777 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 41110 17111 HYMPPPYASL True PC9_epitope_Rep5 1174.5481162328997 1174.5470099358602 70.84 2 0.09978178514175205 0.0025941471376938322 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 21794 13873 ESDLDYIQY True H1975_Epitope_Rep1 1144.4924347482402 1144.4913299358602 58.511 2 0.09977440106772713 0.0025941471376938322 0.9438714419765777 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 70805 10214 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42717496793 44.334 1 0.09976328760117535 0.0025941471376938322 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 8661 21680 AVATDFFTV True PC9_epitope_Rep2 969.48074786573 969.4801949679301 88.868 1 0.099755915214944 0.0025941471376938322 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 119152 12445 VEIPDPVEA True H1975_Epitope_Rep3 967.4862271689899 967.4856749679301 53.062 1 0.09974225354669994 0.0025941471376938322 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 134960 14642 YAFSGVEEL True H1975_Epitope_Rep2 1013.4705771048499 1013.47007496793 61.48 1 0.09972979481542084 0.0025941471376938322 0.9438714419765777 ['ENST00000503240.5_1_5:148743537-148748214:+|nuORF', 'ENSG00000145882|ENST00000274569|PCYOX1L'] 31215 18649 GDLENAFLNL True H1975_Epitope_Rep3 1104.54513902744 1104.54457496793 78.198 1 0.09971382291425292 0.0025941471376938322 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 53773 16441 KYFEKQFEL True PC9_epitope_Rep3 1230.6284747285797 1230.62683490379 68.378 3 0.09969774199238081 0.0025941471376938322 0.9438714419765777 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 136165 22055 YGIENEVFL True PC9_epitope_Rep1 1082.52842633414 1082.52732993586 89.647 2 0.09969461057148409 0.0025941471376938322 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 7461 14676 ASDMLQLEY True H1975_Epitope_Rep2 1068.4797618895598 1068.4786699358601 61.612 2 0.09969316063676267 0.0025941471376938322 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 45941 16479 ISSENLLDAVY True H1975_Epitope_Rep2 1222.60813320682 1222.60702993586 68.603 2 0.09969017131289074 0.0025941471376938322 0.9438714419765777 ['ENST00000471788.1_1_2:207651391-207655428:+|nuORF', 'nc|ENSG00000118246|Q9NYY8-2|FASTKD2', 'ENST00000487777.5_1_2:207631381-207653673:+|nuORF', 'ENSG00000118246|ENST00000402774|FASTKD2'] 121423 12255 VGIDIFTGK True H1975_Epitope_Rep3 948.52803241132 948.52692993586 52.316 2 0.09968322279268624 0.0025941471376938322 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 45861 11772 ISQIVSSITAS True NCI_RA007_Epitope_Rep2 1104.60265390356 1104.6020749679299 50.389 1 0.09965530015316812 0.002620239897519506 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 30404 9703 GAFGKPSSL True PC9_epitope_Rep1 862.45486747106 862.45376993586 42.18 2 0.0996522644921893 0.002620239897519506 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 8947 5317 AVGPVHNSV True PC9_epitope_Rep5 878.4610154806601 878.45990993586 25.465 2 0.09965137332977086 0.002620239897519506 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 27186 17380 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55805496793 72.146 1 0.09964964021991551 0.002620239897519506 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 37950 4767 HEEPSATVP True H1975_Epitope_Rep3 965.4454249861699 965.44432993586 23.462 2 0.09964373965508269 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP'] 137092 17651 YLDAIPPTFY True H1975_Epitope_Rep2 1198.5910265907 1198.58992993586 73.215 2 0.09962380132077837 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000092969|P61812-2|TGFB2'] 62138 22797 LLPDYYLVTV True PC9_epitope_Rep5 1194.65362684726 1194.65252993586 92.679 2 0.09962011434033352 0.002620239897519506 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 26081 10543 FHEGDAYVV True PC9_epitope_Rep6 1035.4661604307498 1035.4650699358601 51.352 2 0.09961885702807405 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL', 'ENST00000460007.1_1_10:29764360-29770575:-|nuORF', 'ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 45987 17035 ISTEVGITNV True PC9_epitope_Rep2 1031.54989005471 1031.5487899358602 70.775 2 0.09958206993346287 0.002620239897519506 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 74658 7341 NLGGLAVAR True H1975_Epitope_Rep3 869.5083000262499 869.50720993586 33.214 2 0.09957796923176329 0.002620239897519506 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 17518 11884 EHINEGETAML True PC9_epitope_Rep2 1242.55505208814 1242.5539499358601 51.036 2 0.09956471005645072 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 139366 11873 YTDTYTEAYM True H1975_Epitope_Rep2 1256.4907204960798 1256.4896299358602 50.748 2 0.09956252001185155 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 86371 10253 QQLGKVVQV True PC9_epitope_Rep5 997.5920296502098 997.59092993586 44.425 2 0.09955864386294049 0.002620239897519506 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 83709 5639 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 26.69 1 0.09955644533414709 0.002620239897519506 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 74223 13557 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 57.284 2 0.09954960916612914 0.002620239897519506 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 106903 24272 SYIPLFPQLYF True PC9_epitope_Rep2 1386.72237511342 1386.7212699358602 98.903 2 0.09954665158225554 0.002620239897519506 0.9438714419765777 ['ENSG00000165996|ENST00000361271|HACD1'] 78188 8400 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 37.682 2 0.09953812105601904 0.002620239897519506 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 73901 8601 NHHMQSISF True PC9_epitope_Rep2 1099.4869129586702 1099.48580993586 38.444 2 0.09953370811087472 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 127528 12819 VQVGETFKV True PC9_epitope_Rep4 1005.5494961318899 1005.54838993586 57.171 2 0.09952957005332526 0.002620239897519506 0.9438714419765777 ['ENSG00000141646|ENST00000342988|SMAD4', 'SMAD4|p.D415Efs*20|1|0.15|ENSG00000141646|chr18:51067121-51067124|AGAC/-|frameshift_variant'] 76132 8829 NRPSVQAAL True PC9_epitope_Rep5 954.5246783663799 954.52358993586 38.906 2 0.09952824545235571 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 54280 9035 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 40.101 3 0.09952417438479758 0.002620239897519506 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 6824 11179 AQIDGTLST True PC9_epitope_Rep3 904.4501760134401 904.44906993586 48.005 2 0.0995222327964947 0.002620239897519506 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 37842 5965 HDLVLVGGSTR True H1975_Epitope_Rep3 1152.6251206836398 1152.62402993586 27.955 2 0.09950671460616684 0.002620239897519506 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 43279 17284 IHDGMNLEL True PC9_epitope_Rep5 1040.49608066004 1040.49498993586 71.489 2 0.09950262345279902 0.002620239897519506 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 85969 17236 QPFGDHIISV True PC9_epitope_Rep4 1111.56620882519 1111.5651099358602 74.307 2 0.0994958355410361 0.002620239897519506 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 48004 14431 KAINVFVSA True PC9_epitope_Rep1 947.54401682863 947.54290993586 60.332 2 0.09949394440587046 0.002620239897519506 0.9438714419765777 ['ENSG00000114209|ENST00000392750|PDCD10'] 92283 4981 RQLENGTTL True NCI_RA007_Epitope_Rep3 1030.5407223533398 1030.5396299358601 26.589 2 0.09948766362714564 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'NCAPG2-ESYT2|1|fusion', 'nc|ENSG00000117868|A0FGR8-5|ESYT2', 'ENST00000435514.3_1_7:158526900-158536411:-|nuORF'] 18702 11309 ELDENLEY True H1975_Epitope_Rep3 1023.43967089939 1023.43907496793 48.606 1 0.09947928151494348 0.002620239897519506 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 27753 20613 FQDSVFNDL True PC9_epitope_Rep4 1083.48728979815 1083.48618993586 87.442 2 0.09947318758893871 0.002620239897519506 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 21565 15562 ERSDTFINL True PC9_epitope_Rep6 1093.54038800017 1093.53928993586 72.059 2 0.0994549464919299 0.002620239897519506 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 22396 15959 ETEVSFLDY True H1975_Epitope_Rep2 1101.4866210918099 1101.4860749679299 66.584 1 0.09944995704766108 0.002620239897519506 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 52338 11493 KPFGQVIST True PC9_epitope_Rep1 975.5389314481899 975.53782993586 49.087 2 0.0994483732400947 0.002620239897519506 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 96139 11519 SEDYPAALP True H1975_Epitope_Rep2 961.4392769765699 961.43872496793 49.366 1 0.09943748539267522 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 102414 15156 SPVVPQISA True PC9_epitope_Rep4 896.4967322830399 896.49562993586 66.225 2 0.09941381195297633 0.002620239897519506 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 132116 8827 VYIPSKTDL True NCI_RA007_Epitope_Rep3 1034.5648118428599 1034.56370993586 41.812 2 0.09939737340294495 0.002620239897519506 0.9438714419765777 ['ENSG00000145912|ENST00000274606|NHP2'] 69636 16907 LVVDWDHHL True PC9_epitope_Rep5 1132.56654317836 1132.56490490379 70.047 3 0.09939673519470761 0.002620239897519506 0.9438714419765777 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 114031 6575 TRM[Oxidation]STVSEL True PC9_epitope_Rep5 1038.5015603437398 1038.50046993586 30.261 2 0.09939500577932099 0.002620239897519506 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 27841 17415 FQLEHIM[Oxidation]DL True PC9_epitope_Rep6 1160.5535959166 1160.5524899358602 79.603 2 0.09938942964961248 0.002620239897519506 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 32594 9229 GHDASQITL True PC9_epitope_Rep2 940.46140940348 940.46030993586 40.84 2 0.09937747237994535 0.002620239897519506 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 106959 21254 SYLDSVHFF True PC9_epitope_Rep2 1113.51311062317 1113.51200993586 87.214 2 0.09937349661657126 0.002620239897519506 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 7820 13101 ATADYICKV True PC9_epitope_Rep3 982.4793679667399 982.47826993586 55.417 2 0.09936547410295832 0.0026376047071099387 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 96820 8972 SESFVSPEA True H1975_Epitope_Rep2 951.41854153199 951.41744993586 39.465 2 0.09935492463933368 0.0026376047071099387 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 131004 16732 VVLGEFGVRNV True PC9_epitope_Rep6 1187.6662572196299 1187.6651699358601 76.844 2 0.0993508883804471 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 137989 20944 YQAPDIDVQL True PC9_epitope_Rep1 1160.57135377528 1160.57077496793 85.382 1 0.09934730713542196 0.0026376047071099387 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 6072 15035 APMPPIIHA True PC9_epitope_Rep3 945.51060852537 945.50950993586 62.961 2 0.09934474349200086 0.0026376047071099387 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 112830 6247 TPMGPGRTV True PC9_epitope_Rep3 914.46438660894 914.46328993586 29.067 2 0.09934344967870626 0.0026376047071099387 0.9438714419765777 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 86481 17400 QQVQRLPFL True PC9_epitope_Rep6 1127.64512785223 1127.64402993586 79.544 2 0.09934199693344194 0.0026376047071099387 0.9438714419765777 ['ENSG00000132963|ENST00000380842|POMP'] 137499 20280 YLPPGFLSA True PC9_epitope_Rep4 963.50656869075 963.5060249679301 86.149 1 0.09933777440823587 0.0026376047071099387 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 76702 5745 NTNPNFVR True PC9_epitope_Rep5 960.4777281739599 960.47662993586 27.091 2 0.09933583251749502 0.0026376047071099387 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 127445 17234 VQSGLRILL True PC9_epitope_Rep6 997.6284151589299 997.62730993586 78.889 2 0.09933431493556363 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 137130 15942 YLDIGQVYY True H1975_Epitope_Rep3 1132.54407639828 1132.5429699358601 66.774 2 0.09933055991411055 0.0026376047071099387 0.9438714419765777 ['ENSG00000006555|ENST00000371276|TTC22'] 136816 17988 YITERIIAV True PC9_epitope_Rep5 1076.62299542532 1076.62188993586 74.207 2 0.09930687669990451 0.0026376047071099387 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 9617 21095 AYFDVPELI True PC9_epitope_Rep6 1065.5382627418498 1065.5371699358602 93.97 2 0.09929865235083273 0.0026376047071099387 0.9438714419765777 ['CLIP4|p.A344Hfs*6|1|0.23|ENSG00000115295|chr2:29152693-29152693|G/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 6683 7225 AQAPDLQRV True PC9_epitope_Rep6 996.5352430500799 996.53414993586 36.902 2 0.09929797434225136 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 138314 16651 YRAPELML True PC9_epitope_Rep4 991.5160878286299 991.51498993586 72.012 2 0.09928872047443758 0.0026376047071099387 0.9438714419765777 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 67096 10546 LTDAIDEY True H1975_Epitope_Rep3 938.4232925592601 938.42274496793 45.631 1 0.09928506640877374 0.0026376047071099387 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 35194 17939 GSDVVDWLY True H1975_Epitope_Rep2 1052.48147614172 1052.48097496793 74.324 1 0.09928079389035042 0.0026376047071099387 0.9438714419765777 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'DVL3|p.H453Y|1|0.13|ENSG00000161202|chr3:184167924-184167924|C/T|missense_variant', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 25622 12044 FEVEEVETP True H1975_Epitope_Rep2 1077.4866210918099 1077.48552993586 51.407 2 0.09927562282643623 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 61946 16547 LLLNNDNLLR True PC9_epitope_Rep6 1196.6877209401998 1196.68662993586 76.087 2 0.09927250108736695 0.0026376047071099387 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 130954 17656 VVITEKGISDL True PC9_epitope_Rep3 1172.66525416012 1172.66414993586 73.105 2 0.09926971771915043 0.0026376047071099387 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 31214 18720 GDLENAFLNL True H1975_Epitope_Rep3 1104.54513902744 1104.5440499358601 78.503 2 0.09926939789402985 0.0026376047071099387 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 123285 15952 VHSEQVFAL True PC9_epitope_Rep1 1028.5290950404797 1028.5279899358602 66.169 2 0.09926623672319314 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 8257 15886 ATINEVVQV True PC9_epitope_Rep6 971.52876068731 971.52766993586 73.384 2 0.0992662072089731 0.0026376047071099387 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217', 'ZNF217|p.S275Ifs*4|1|0.32|ENSG00000171940|chr20:53582004-53582005|-/T|frameshift_variant'] 32740 18459 GHVVDIVAL True PC9_epitope_Rep3 921.52836676449 921.52726993586 76.206 2 0.09925880960475829 0.0026376047071099387 0.9438714419765777 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 72711 16950 MYPYIFHVL True NCI_RA007_Epitope_Rep4 1181.59433814933 1181.59324993586 73.456 2 0.09925638084957585 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 109600 11023 THDEAINVL True PC9_epitope_Rep6 1010.5032742154599 1010.50216993586 53.302 2 0.09925375084790893 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 116192 14098 TVTNAVVTV True PC9_epitope_Rep3 902.50729696674 902.50618993586 59.313 2 0.09924409559934336 0.0026376047071099387 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 37760 7146 HAVGPSTSL True PC9_epitope_Rep5 867.4450310633501 867.44392993586 32.456 2 0.09924376673212082 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 43978 6260 ILGPGLNK True H1975_Epitope_Rep3 810.4963383602201 810.49524993586 29.09 2 0.09924039273198057 0.0026376047071099387 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000426688.1_1_1:81674334-81674790:+|nuORF'] 75764 2620 NRAPNTAEL True PC9_epitope_Rep2 984.4988575413599 984.49776993586 14.733 2 0.09922291482860106 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 32657 7083 GHLEKAVVL True PC9_epitope_Rep6 964.5705659296399 964.56946993586 36.28 2 0.09921941644458745 0.0026376047071099387 0.9438714419765777 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENST00000460806.1_1_3:5021979-5023208:+|nuORF', 'ENSG00000134107|ENST00000256495|BHLHE40', 'ENSG00000123095|ENST00000242728|BHLHE41'] 110060 15337 THYDHVLIEL True PC9_epitope_Rep6 1238.6295373577398 1238.62789490379 71.122 3 0.09921662117819353 0.0026376047071099387 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 130339 8667 VTTVTEIAG True H1975_Epitope_Rep3 889.4756624852898 889.47511496793 38.336 1 0.0992133038946903 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 54454 13849 KYVTVYNLI True NCI_RA007_Epitope_Rep4 1111.62774645259 1111.62664993586 60.53 2 0.0992072985368263 0.0026376047071099387 0.9438714419765777 ['ENSG00000138592|ENST00000307179|USP8', 'ENST00000560954.5_1_15:50731270-50751199:+|nuORF', 'ENST00000558892.1_1_15:50731270-50736797:+|nuORF'] 21142 8264 ERDSQTQAIL True PC9_epitope_Rep2 1159.5833154413099 1159.5822099358602 37.148 2 0.0992041546685465 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 97995 13204 SHSPPLLQV True PC9_epitope_Rep2 976.53418042092 976.53308993586 56.068 2 0.09920127846357182 0.0026376047071099387 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 100424 9079 SLPDFPAAAK True NCI_RA007_Epitope_Rep3 1015.5338460677499 1015.53274993586 42.8 2 0.09920006487014953 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'ENST00000539881.5_1_16:57068826-57081664:+|nuORF', 'ENST00000538930.5_1_16:57075247-57096263:+|nuORF'] 48363 8256 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54806993586 36.71 2 0.09919012930774025 0.0026376047071099387 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 102817 20858 SQFPGAITL True PC9_epitope_Rep2 932.4967322830399 932.49618496793 85.675 1 0.09918991556465795 0.0026376047071099387 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 53805 13223 KYFLWEEKF True NCI_RA007_Epitope_Rep4 1288.6492101731599 1288.64755490379 57.989 3 0.09918689844809139 0.0026376047071099387 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 1849 10459 AEIEETLQAA True H1975_Epitope_Rep1 1073.5240692296898 1073.5229699358601 45.185 2 0.09917833467175229 0.0026376047071099387 0.9438714419765777 ['ENSG00000176903|ENST00000316836|PNMA1'] 31223 10754 GDLGIEIPAEK True NCI_RA007_Epitope_Rep4 1140.60265390356 1140.60154993586 48.212 2 0.09917793859153043 0.0026376047071099387 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 46601 4514 ITSPVVTQK True NCI_RA007_Epitope_Rep3 971.56514619603 971.56404993586 24.612 2 0.09917441013296963 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR', 'ENST00000504466.1_1_5:74645886-74647190:+|nuORF'] 39884 19468 HQILTPFLL True PC9_epitope_Rep6 1080.6331661862 1080.63206993586 87.547 2 0.09916265469210467 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 106788 20486 SYGDILHVI True PC9_epitope_Rep2 1015.53384606775 1015.5332749679301 84.229 1 0.09914625962760847 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 93984 14332 RVPKTLVLV True PC9_epitope_Rep1 1023.6804507317898 1023.6793499358599 59.952 2 0.0991233340026922 0.0026376047071099387 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 108793 5980 TEQEVAQVA True H1975_Epitope_Rep3 973.4716397340098 973.47054993586 28.013 2 0.0991135022126442 0.0026376047071099387 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 63320 20265 LPDIFEAQIA True PC9_epitope_Rep6 1115.58627556343 1115.5851699358602 90.64 2 0.09910924332592858 0.0026376047071099387 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 125228 14475 VLQSALAAIR True PC9_epitope_Rep2 1040.6342288153598 1040.63312993586 60.948 2 0.09908910922216672 0.0026376047071099387 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 119145 10245 VEINENLPA True H1975_Epitope_Rep3 997.5080252427299 997.5074749679301 44.456 1 0.099088621990388 0.0026376047071099387 0.9438714419765777 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF', 'ENST00000317633.13_2_5:70196496-70197687:+|nuORF'] 43269 11328 IHDGM[Oxidation]NLEL True PC9_epitope_Rep2 1056.49099566004 1056.4898899358602 48.894 2 0.09908568836264929 0.0026376047071099387 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 138792 17044 YSDFFTDCY True H1975_Epitope_Rep2 1159.41682727983 1159.41627496793 70.816 1 0.09908340875976407 0.0026376047071099387 0.9438714419765777 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 6957 13469 AQMDYYGTRL True PC9_epitope_Rep4 1216.55465816532 1216.5535699358602 59.705 2 0.09907746110119467 0.0026376047071099387 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000397102.5_1_3:10355120-10362775:-|nuORF', 'ENST00000397099.1_1_3:10357003-10360966:-|nuORF'] 70053 15450 LYGRNFNYL True PC9_epitope_Rep6 1158.5821932425 1158.58108993586 71.586 2 0.09907514331444991 0.0026376047071099387 0.9438714419765777 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 103781 10196 SRFPQGAQL True PC9_epitope_Rep4 1002.5246783663797 1002.52358993586 46.895 2 0.09907293247822328 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 132933 13604 VYTVVDEM[Oxidation]F True NCI_RA007_Epitope_Rep5 1117.50016336141 1117.49957496793 59.015 1 0.09907084238493775 0.0026376047071099387 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 34708 19365 GQMGSFIRL True PC9_epitope_Rep3 1007.5222358382299 1007.52112993586 79.711 2 0.09906874425039465 0.0026376047071099387 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 132427 9502 VYNPTPNSL True NCI_RA007_Epitope_Rep4 1003.49746055903 1003.49636993586 43.4 2 0.09906410652234167 0.0026376047071099387 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 35483 8225 GTFDPDNLEK True NCI_RA007_Epitope_Rep3 1134.5193182024198 1134.51822993586 39.489 2 0.09905667862666453 0.0026376047071099387 0.9438714419765777 ['ENSG00000182154|ENST00000371443|MRPL41'] 13994 5723 DRSKSYEL True PC9_epitope_Rep3 996.4876241513199 996.48652993586 27.086 2 0.09905641455613413 0.0026376047071099387 0.9438714419765777 ['ENSG00000100605|ENST00000267615|ITPK1', 'nc|ENSG00000100605|Q13572-2|ITPK1'] 116495 6358 TYDNVHQQF True NCI_RA007_Epitope_Rep3 1150.5043368446202 1150.5032299358602 32.012 2 0.09905316575012807 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24'] 122823 7660 VGVNGFGR True PC9_epitope_Rep2 804.4242360491198 804.42312993586 34.834 2 0.09905136949511971 0.0026376047071099387 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 94818 19672 RYLTVAAVF True PC9_epitope_Rep2 1038.5862159937797 1038.5851099358601 81.055 2 0.0990492689495438 0.0026376047071099387 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 84536 8364 QHADPPVQI True PC9_epitope_Rep6 1003.50869394907 1003.50758993586 41.828 2 0.09903983717211548 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 108553 11542 TEGINLVTA True H1975_Epitope_Rep2 916.48656152216 916.48601496793 49.456 1 0.09903413296961706 0.0026376047071099387 0.9438714419765777 ['ENSG00000181004|ENST00000314218|BBS12'] 84923 10733 QHTPTSITL True PC9_epitope_Rep2 996.52400966004 996.52290993586 46.603 2 0.09903391701971052 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'SETD5|p.K832Rfs*8|1|0.2|ENSG00000168137|chr3:9464441-9464441|A/-|frameshift_variant', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF'] 2086 16346 AELLPLVSA True H1975_Epitope_Rep2 911.53278343859 911.5322349679301 68.094 1 0.09902780438270777 0.0026376047071099387 0.9438714419765777 ['ENST00000569496.5_1_16:2514507-2514666:+|nuORF', 'nc|ENSG00000162062|Q7L2K0-2|TEDC2', 'ENSG00000162062|ENST00000361837|TEDC2'] 3945 13887 AHDTTLVAL True PC9_epitope_Rep5 939.50254593947 939.50144993586 58.436 2 0.09902638003604884 0.0026376047071099387 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 118165 15580 VAVPLYDTL True NCI_RA007_Epitope_Rep4 989.54334812229 989.54224993586 67.681 2 0.09902613707560494 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 27927 17962 FQNPFRSEL True PC9_epitope_Rep4 1136.56145779792 1136.56036993586 77.145 2 0.09901917971607341 0.0026376047071099387 0.9438714419765777 ['ENSG00000073050|ENST00000262887|XRCC1', 'XRCC1|p.D487Tfs*6|2|0.14|ENSG00000073050|chr19:43546074-43546074|C/-|frameshift_variant'] 26143 10474 FHLSSQSSL True PC9_epitope_Rep6 1004.49270953176 1004.49160993586 51.047 2 0.0990105673400042 0.0026376047071099387 0.9438714419765777 ['SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion', 'nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 722 6567 AAVNHISQL True H1975_Epitope_Rep3 951.51377932951 951.51268993586 30.219 2 0.09900929375947856 0.0026376047071099387 0.9438714419765777 ['ENSG00000120029|ENST00000370033|ARMH3', 'ENST00000495001.1_1_10:103607287-103649300:-|nuORF', 'nc|ENSG00000120029|Q5T2E6-2|ARMH3'] 9528 20723 AYAENIALL True PC9_epitope_Rep2 976.5229470308799 976.52184993586 85.148 2 0.09899106473046958 0.0026376047071099387 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 95206 13623 SAAMPGASL True PC9_epitope_Rep5 803.38473930591 803.38364993586 57.424 2 0.09898916771420993 0.0026376047071099387 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 85119 15889 QISDTSVVL True PC9_epitope_Rep6 960.51277627 960.51166993586 73.395 2 0.09898208458451788 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 75571 19673 NQPGVLIQV True PC9_epitope_Rep1 966.5498304850599 966.54928496793 80.497 1 0.0989790343143165 0.0026376047071099387 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 47544 13014 IYLSKPTHW True PC9_epitope_Rep1 1143.60767971435 1143.60604490379 54.93 3 0.09897663029124168 0.0026376047071099387 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 102612 9995 SQAPSTMQV True PC9_epitope_Rep5 947.4382314307501 947.43712993586 43.421 2 0.0989721845264149 0.0026376047071099387 0.9438714419765777 ['ENSG00000112658|ENST00000265354|SRF'] 95579 6350 SASGPLHSV True PC9_epitope_Rep5 853.4293809992101 853.42828993586 29.401 2 0.09896665074579317 0.0026376047071099387 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 108799 8633 TEQEVYAQVA True H1975_Epitope_Rep2 1136.5349682665599 1136.5338699358601 38.163 2 0.09896067735822302 0.0026376047071099387 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 31461 10152 GEEEPPALP True H1975_Epitope_Rep2 937.4392769765698 937.43872496793 44.049 1 0.09893623565709188 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 32671 11152 GHNAIINTL True PC9_epitope_Rep4 951.5137793295102 951.51268993586 50.675 2 0.09893126462054869 0.0026376047071099387 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 4279 21476 AIISELVSI True PC9_epitope_Rep4 943.5589981864299 943.5584449679301 90.798 1 0.09892730284703048 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 9191 18551 AVPEIMDRI True PC9_epitope_Rep3 1042.5481162329 1042.5470099358602 76.575 2 0.09892426522939429 0.0026376047071099387 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4', 'ENSG00000123983|ENST00000357430|ACSL3'] 47364 10146 IYIAGHPAF True NCI_RA007_Epitope_Rep3 987.51780208079 987.51670993586 46.998 2 0.09892252592873606 0.0026376047071099387 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 9380 19828 AVVEFLTSV True PC9_epitope_Rep6 963.5276980581499 963.52660993586 88.929 2 0.09891849840826297 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA'] 98302 8887 SIFSKFTSK True NCI_RA007_Epitope_Rep4 1043.56514619603 1043.56404993586 41.01 2 0.09890826034891713 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000072518|Q7KZI7-15|MARK2', 'nc|ENSG00000072518|Q7KZI7-10|MARK2', 'nc|ENSG00000072518|Q7KZI7-13|MARK2', 'nc|ENSG00000072518|Q7KZI7-7|MARK2', 'nc|ENSG00000072518|Q7KZI7-2|MARK2', 'nc|ENSG00000072518|Q7KZI7-5|MARK2', 'nc|ENSG00000072518|Q7KZI7-16|MARK2', 'nc|ENSG00000072518|Q7KZI7-4|MARK2', 'nc|ENSG00000072518|Q7KZI7-9|MARK2', 'nc|ENSG00000072518|Q7KZI7-12|MARK2', 'nc|ENSG00000072518|Q7KZI7-14|MARK2', 'nc|ENSG00000072518|Q7KZI7-3|MARK2', 'nc|ENSG00000072518|Q7KZI7-6|MARK2', 'nc|ENSG00000072518|Q7KZI7-11|MARK2', 'nc|ENSG00000072518|Q7KZI7-8|MARK2', 'ENSG00000072518|ENST00000402010|MARK2'] 21019 10569 ERATAISL True PC9_epitope_Rep5 859.4763311916299 859.4752299358599 45.642 2 0.09890429625060784 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000598459.5_1_19:39949480-39950711:+|nuORF'] 133268 9099 WEIDNNPKV True H1975_Epitope_Rep1 1113.54547338061 1113.54436993586 39.903 2 0.0989040741572346 0.0026376047071099387 0.9438714419765777 ['ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'PSIP1|p.K246Afs*3|1|0.34|ENSG00000164985|chr9:15474127-15474131|TCTTT/-|frameshift_variant', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000463712.6_1_9:15489396-15510916:-|nuORF'] 27325 15495 FMDPASALY True H1975_Epitope_Rep3 1013.45281886573 1013.4522749679301 65.018 1 0.0988988204119191 0.0026376047071099387 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 136169 21955 YGIENEVFL True PC9_epitope_Rep3 1082.52842633414 1082.52732993586 89.75 2 0.09889799057805766 0.0026376047071099387 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 113870 17697 TRFAEVECL True PC9_epitope_Rep3 1066.5117307241799 1066.5106299358602 73.269 2 0.0988844263182806 0.0026376047071099387 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 128194 11851 VRTPYTMSY True PC9_epitope_Rep4 1116.52738078832 1116.5262899358602 53.361 2 0.09888337918577286 0.0026376047071099387 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 96167 13467 SEEFPSFGA True H1975_Epitope_Rep1 969.4079768482899 969.4074249679301 56.917 1 0.09888175959934514 0.0026376047071099387 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 17634 13453 EHNSTIIVM True PC9_epitope_Rep1 1042.51173072418 1042.5106299358602 56.606 2 0.09886655470685314 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 1787 7426 AEIAESVQA True H1975_Epitope_Rep2 916.45017601344 916.44906993586 33.509 2 0.0988545758903365 0.0026376047071099387 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 102856 11151 SQHGVIIQL True NCI_RA007_Epitope_Rep2 993.5607295219299 993.55962993586 47.957 2 0.09884514829602659 0.0026376047071099387 0.9438714419765777 ['ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000572564.1_1_17:4082142-4082325:-|nuORF'] 44950 9957 IQFNPPLSEK True NCI_RA007_Epitope_Rep4 1171.62372370131 1171.62262993586 45.143 2 0.09883729843359741 0.0026376047071099387 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 73989 11191 NHQGATPLVL True PC9_epitope_Rep4 1048.56654317836 1048.5654499358602 50.825 2 0.09883212655444504 0.0026376047071099387 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 13287 7115 DLYDAGVK True H1975_Epitope_Rep3 879.43379767331 879.43270993586 32.338 2 0.0988320669701691 0.0026376047071099387 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 135259 17106 YAYDGKDYLAL True PC9_epitope_Rep6 1290.6132185872598 1290.6121299358601 78.373 2 0.09882990102580706 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 38489 6099 HHDDPEVL True PC9_epitope_Rep1 960.4301092752 960.42900993586 28.274 2 0.09882962943774899 0.0026376047071099387 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 35712 7605 GTSELLLAK True NCI_RA007_Epitope_Rep3 930.5385970950199 930.53750993586 37.046 2 0.09881910822933539 0.0026376047071099387 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 85433 6625 QLETLGQEK True PC9_epitope_Rep5 1044.5451390274397 1044.5440499358601 30.456 2 0.09881090589800315 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 96532 9208 SELPAPPAA True H1975_Epitope_Rep2 851.4388830537499 851.43833496793 40.372 1 0.09881063511801393 0.0026376047071099387 0.9438714419765777 ['ENST00000584717.1_1_17:80059560-80064242:-|nuORF'] 63563 20867 LPLFLGRLP True PC9_epitope_Rep1 1024.64333694708 1024.64222993586 85.09 2 0.0988019712198349 0.0026376047071099387 0.9438714419765777 ['ENSG00000283632|ENST00000413988|EXOC3L2', 'nc|ENSG00000283632|Q2M3D2|EXOC3L2'] 113213 20422 TQDSSILPL True PC9_epitope_Rep2 972.5127762699999 972.51222496793 83.98 1 0.09879875183668885 0.0026376047071099387 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 25523 5070 FEQEM[Oxidation]ATAA True NCI_RA007_Epitope_Rep4 1012.4171620134398 1012.41606993586 26.003 2 0.09878710937512024 0.0026376047071099387 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 126602 7917 VPPPPPIAR True PC9_epitope_Rep2 942.56508662638 942.56398993586 35.819 2 0.09878255416975214 0.0026376047071099387 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 60248 13447 LIDVGTGYY True H1975_Epitope_Rep2 999.49131254943 999.4907749679301 56.858 1 0.09877592811857776 0.0026376047071099387 0.9438714419765777 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 77626 13689 NYVQAVEEF True NCI_RA007_Epitope_Rep3 1097.5029398622898 1097.50184993586 61.158 2 0.09877515420008706 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000529239.1_1_8:61850915-61851251:-|nuORF', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 8395 2610 ATPTSPIRVK True NCI_RA007_Epitope_Rep3 1068.6291434349198 1068.6280499358602 14.735 2 0.09876450744802848 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 47346 9534 IYHNPTANSF True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 42.019 2 0.09875852864246351 0.0026376047071099387 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 14852 11974 DYFEEYGK True PC9_epitope_Rep6 1049.4341915961297 1049.4330899358602 57.324 2 0.09875757569580607 0.0026376047071099387 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 132508 6922 VYPERSTSY True PC9_epitope_Rep5 1100.51383889916 1100.51274993586 31.596 2 0.09875629420324528 0.0026376047071099387 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 118704 4056 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 20.73 2 0.09875203649831135 0.0026376047071099387 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 107199 18359 SYPDLLPTF True NCI_RA007_Epitope_Rep4 1051.52261267771 1051.5215099358602 79.424 2 0.09874979861457835 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 116207 19555 TVTSDLLQV True PC9_epitope_Rep4 974.5284263341399 974.5273299358599 83.34 2 0.09874908342824495 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 35426 9321 GTDNGDLPSY True H1975_Epitope_Rep2 1037.43016884485 1037.42957496793 40.814 1 0.0987476847320228 0.0026376047071099387 0.9438714419765777 ['ENSG00000135249|ENST00000257700|RINT1'] 95701 11716 SAYEFYHAL True NCI_RA007_Epitope_Rep3 1099.49746055903 1099.49636993586 53.198 2 0.09874715558380134 0.0026376047071099387 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 126991 13149 VPWMPPGKSSA True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 55.443 2 0.09874663997444043 0.0026376047071099387 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 96874 10181 SESVPVIAA True H1975_Epitope_Rep2 871.46509780159 871.46454496793 44.163 1 0.09873944623088504 0.0026376047071099387 0.9438714419765777 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 105720 12199 SVHKGFAFV True PC9_epitope_Rep5 990.5287011176598 990.52760993586 51.909 2 0.09873779920460346 0.0026376047071099387 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 45366 6485 ISDLAQHY True H1975_Epitope_Rep2 945.4555957470502 945.45448993586 29.861 2 0.09872988702364825 0.0026376047071099387 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 110065 7748 TIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1005.4437110134398 1005.44260993586 34.762 2 0.09872788985477393 0.0026376047071099387 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 40175 17723 HRFPFSSAL True PC9_epitope_Rep3 1060.5454138109599 1060.5443099358602 73.368 2 0.09872741076057892 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 90310 15802 RIADQFLGA True PC9_epitope_Rep1 989.5294293936499 989.52832993586 65.594 2 0.09872426956817126 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 114877 6134 TTDSSYGQNY True H1975_Epitope_Rep2 1134.4465471849799 1134.44597496793 28.572 1 0.09871874052015481 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 108968 7904 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 35.35 2 0.09871701191322133 0.0026376047071099387 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 28933 11288 FTEPNEISQY True H1975_Epitope_Rep1 1226.54553295026 1226.5449749679299 48.397 1 0.0987159443864189 0.0026376047071099387 0.9438714419765777 ['ENSG00000143155|ENST00000367833|TIPRL'] 61706 21644 LLIENVASL True PC9_epitope_Rep5 970.5698972232999 970.56880993586 88.298 2 0.09871382145040117 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1', 'ENST00000388829.3_1_X:13397321-13397372:-|nuORF', 'ENST00000419783.1_2_3:49395567-49395990:-|nuORF'] 104657 9634 SSYSGVTQL True H1975_Epitope_Rep3 940.4501760134401 940.44906993586 42.073 2 0.09871346856312117 0.0026376047071099387 0.9438714419765777 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 52801 6202 KQTDVAAEV True PC9_epitope_Rep5 959.4923751785899 959.49126993586 28.839 2 0.09871051297130803 0.0026376047071099387 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217'] 106833 22909 SYIALPLTL True PC9_epitope_Rep2 989.57973363101 989.57918496793 93.626 1 0.09871025281253283 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 68620 12620 LVAASQAALGL True NCI_RA007_Epitope_Rep3 1012.5916952970399 1012.59058993586 56.886 2 0.09870866159886921 0.0026376047071099387 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 14067 12136 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45284993586 51.765 2 0.09870535125218714 0.0026376047071099387 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 114836 12139 TTDFPGNYSGY True H1975_Epitope_Rep1 1220.49858275784 1220.4974899358601 51.709 2 0.09870504169481109 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 76098 9458 NRNELAETL True PC9_epitope_Rep4 1058.5356369729 1058.53452993586 43.989 2 0.09869607292744073 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'RSF1|p.K386Nfs*6|1|0.19|ENSG00000048649|chr11:77702071-77702071|T/-|frameshift_variant'] 5125 21187 ALMPVLNQV True PC9_epitope_Rep1 983.54738795691 983.54628993586 86.33 2 0.09869312182892255 0.0026376047071099387 0.9438714419765777 ['ENSG00000223496|ENST00000435634|EXOSC6'] 35437 5852 GTDVDAANLR True NCI_RA007_Epitope_Rep2 1030.50433684462 1030.5032299358602 27.381 2 0.09869172880518631 0.0026376047071099387 0.9438714419765777 ['ENSG00000164305|ENST00000308394|CASP3'] 138568 5302 YRPGTVALR True NCI_RA007_Epitope_Rep4 1031.5876129761098 1031.58650993586 26.948 2 0.0986894829371903 0.0026376047071099387 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'H3C13|p.H40Q|1|0.1|ENSG00000183598|chr1:149813562-149813562|G/C|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 70773 7482 MEEEPTHLP True H1975_Epitope_Rep2 1081.4750108622898 1081.47390993586 33.727 2 0.09868605628525043 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 74586 10215 NLDPAVHEV True PC9_epitope_Rep5 992.49270953176 992.49160993586 44.28 2 0.09867223910513889 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'ENST00000503738.5_1_2:27851561-27855513:+|nuORF', 'ENST00000461249.1_1_2:27852141-27855513:+|nuORF', 'ENST00000478484.5_1_2:27851925-27854072:+|nuORF'] 38084 14384 HENILGFIA True H1975_Epitope_Rep2 1012.5341804209199 1012.53308993586 60.478 2 0.09866816328280807 0.0026376047071099387 0.9438714419765777 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant'] 89036 7792 REEEVTGPVIA True H1975_Epitope_Rep2 1198.61936659686 1198.61826993586 34.92 2 0.09866695450518481 0.0026376047071099387 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 2666 7171 AETAAVTVAA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 32.516 1 0.09866435758381993 0.0026376047071099387 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 109215 17072 TFTFSHATF True PC9_epitope_Rep4 1057.4868958753298 1057.48578993586 73.665 2 0.09865061237752858 0.0026376047071099387 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 21835 11686 ESDVGVVVY True H1975_Epitope_Rep2 965.47057710485 965.46948993586 50.023 2 0.09864919144782328 0.0026376047071099387 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 59916 17051 LHILAEQSL True PC9_epitope_Rep5 1022.5760452329 1022.57494993586 70.606 2 0.09864648799041881 0.0026376047071099387 0.9438714419765777 ['ENSG00000181004|ENST00000314218|BBS12'] 6062 14732 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 61.489 2 0.09863642115179817 0.0026376047071099387 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 96517 6741 SELITKAVA True H1975_Epitope_Rep2 930.5385970950199 930.53750993586 30.844 2 0.09863472389059577 0.0026376047071099387 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-2|p.P39S|2|0.36|ENSG00000187837|chr6:26056314-26056314|G/A|missense_variant', 'ENSG00000184357|ENST00000331442|H1-5'] 42590 7300 IESRTLAIA True NCI_RA007_Epitope_Rep5 972.5603951687599 972.55928993586 34.757 2 0.09862986463600175 0.0026376047071099387 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 31765 10928 GELLFVHSA True H1975_Epitope_Rep2 971.50763131991 971.50652993586 47.067 2 0.09862776230004613 0.0026376047071099387 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 8637 6941 AVAPAGILK True NCI_RA007_Epitope_Rep3 838.5276384885 838.52654993586 34.409 2 0.09862282501537976 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000186994|Q6NY19-1|KANK3', 'ENSG00000186994|ENST00000330915|KANK3', 'ENST00000593331.1_1_19:8399202-8399642:-|nuORF'] 73998 7396 NHQGTYVL True PC9_epitope_Rep4 930.4559301002199 930.45482993586 35.796 2 0.0986173504040537 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 16084 8508 EEDIRDLAA True H1975_Epitope_Rep1 1030.4931034545798 1030.49200993586 37.656 2 0.0986134532792337 0.0026544331919559133 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 119150 12507 VEIPDPVEA True H1975_Epitope_Rep2 967.4862271689899 967.4856749679301 53.199 1 0.09861288575663495 0.0026544331919559133 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 26043 11109 FHDLEGNAV True PC9_epitope_Rep1 1000.4614094034799 1000.46030993586 47.616 2 0.09861168462361698 0.0026544331919559133 0.9438714419765777 ['ENSG00000099219|ENST00000339450|ERMP1'] 110075 11836 TIAEGFVKA True PC9_epitope_Rep2 934.5123823471798 934.51128993586 50.856 2 0.09860848911394605 0.0026544331919559133 0.9438714419765777 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 102998 18260 SQISDTSVVL True PC9_epitope_Rep5 1047.5448046742702 1047.54427496793 75.251 1 0.09860639505782899 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 137387 20827 YLLDLHSYL True PC9_epitope_Rep4 1135.59136094387 1135.59026993586 88.262 2 0.09860558689446941 0.0026544331919559133 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'MARCHF6|p.A560T|1|0.21|ENSG00000145495|chr5:10410263-10410263|G/A|missense_variant'] 140723 10129 YYQHIVTTL True NCI_RA007_Epitope_Rep4 1136.5866099166 1136.58550993586 45.818 2 0.09860481629595766 0.0026544331919559133 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 103071 10746 SQLGIFISK True NCI_RA007_Epitope_Rep3 991.5702315764701 991.56912993586 49.316 2 0.09860026030861219 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 27407 7401 FNDPNAKEM True PC9_epitope_Rep5 1064.45969515132 1064.4585899358601 33.424 2 0.09859989999004184 0.0026544331919559133 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 65254 11701 LSEGVTISY True H1975_Epitope_Rep1 967.4862271689901 967.48512993586 49.999 2 0.0985945133323449 0.0026544331919559133 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 6106 9673 APM[Oxidation]PPIIHA True PC9_epitope_Rep6 961.50552352537 961.50442993586 47.581 2 0.09859290982282956 0.0026544331919559133 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 78166 6517 PAPPPPPPP True H1975_Epitope_Rep3 865.46978925921 865.46868993586 30.038 2 0.09859000078380094 0.0026544331919559133 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 299 9385 AAHLLNDAL True NCI_RA007_Epitope_Rep5 936.50288029264 936.50178993586 42.739 2 0.09858802305609267 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'ENST00000467906.5_1_6:43030654-43039600:+|nuORF', 'nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 1807 11429 AEIDASNIV True H1975_Epitope_Rep2 930.46582607758 930.46472993586 49.014 2 0.09858644633554574 0.0026544331919559133 0.9438714419765777 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 8353 14191 ATLSKIIQV True PC9_epitope_Rep6 971.6015317047498 971.60042993586 66.469 2 0.09858220676429721 0.0026544331919559133 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 69355 16699 LVQAFQFTDK True PC9_epitope_Rep1 1195.62372370131 1195.62262993586 69.061 2 0.09857734752989224 0.0026544331919559133 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 110077 12570 TIAEGFVKA True PC9_epitope_Rep5 934.5123823471798 934.51128993586 53.35 2 0.09856840495939123 0.0026544331919559133 0.9438714419765777 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 28795 15123 FTDEEVDELYR True PC9_epitope_Rep6 1414.6252398229399 1414.62414993586 70.234 2 0.09856413054996505 0.0026544331919559133 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 65260 11753 LSEGVTISY True H1975_Epitope_Rep3 967.4862271689901 967.4856749679301 50.351 1 0.09856289458974557 0.0026544331919559133 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 58378 6016 LEVLSGER True H1975_Epitope_Rep3 901.4868958753299 901.48578993586 28.153 2 0.09856123990351211 0.0026544331919559133 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1'] 37314 10874 GVVPTIQKV True PC9_epitope_Rep6 939.5753169569098 939.57420993586 52.689 2 0.09854774471960458 0.0026544331919559133 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 31481 12827 GEELSPPLP True H1975_Epitope_Rep2 937.4756624852898 937.47511496793 54.448 1 0.09853266020054302 0.0026544331919559133 0.9438714419765777 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 114240 14943 TRYIAPTIL True PC9_epitope_Rep6 1046.6124307416198 1046.61132993586 69.483 2 0.09852885282559731 0.0026544331919559133 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 6251 5590 APRLQSEVA True PC9_epitope_Rep4 969.5243440132099 969.52324993586 28.285 2 0.09852672755325215 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 86165 4937 QPSQPVTSA True PC9_epitope_Rep1 913.4505103666099 913.44940993586 23.852 2 0.0985110842647663 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 2480 2763 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 14.711 2 0.09850396130039175 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 96901 8612 SETEYVIRC True H1975_Epitope_Rep2 1098.5015599633 1098.50046993586 38.082 2 0.09849820535551544 0.0026544331919559133 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 132188 13377 VYKAFVDNY True PC9_epitope_Rep2 1117.54441075145 1117.5433099358602 56.736 2 0.09849547845537349 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 107426 4691 SYTSHTNEI True NCI_RA007_Epitope_Rep5 1050.4618033263002 1050.4607099358602 24.731 2 0.09849195178712947 0.0026544331919559133 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 9221 19593 AVQDFLHEI True PC9_epitope_Rep4 1070.53965972418 1070.53856993586 83.489 2 0.09848730725715621 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 112927 20876 TPQSLFILFG True H1975_Epitope_Rep1 1121.6120963884498 1121.61098993586 86.743 2 0.0984860098900244 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 61832 20763 LLLAQLSDA True PC9_epitope_Rep2 942.53859709502 942.53750993586 85.307 2 0.09848500378701318 0.0026544331919559133 0.9438714419765777 ['ENSG00000175348|ENST00000534025|TMEM9B'] 14128 10185 DSESSGVLY True H1975_Epitope_Rep2 955.41345615155 955.4129049679301 44.178 1 0.09848478363298133 0.0026544331919559133 0.9438714419765777 ['ENSG00000176390|ENST00000324238|CRLF3', 'nc|ENSG00000176390|Q8IUI8-2|CRLF3'] 77284 19946 NYISGIQTI True PC9_epitope_Rep3 1007.52876068731 1007.52817496793 81.965 1 0.09847083789222769 0.0026544331919559133 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 75010 12079 NMAEGFRTV True PC9_epitope_Rep5 1023.4807649490699 1023.47966993586 51.456 2 0.09846969071845345 0.0026544331919559133 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 115214 8421 TVAVPLVGK True NCI_RA007_Epitope_Rep5 882.5538532363399 882.55274993586 39.069 2 0.09846393724477541 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 64 13109 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 55.549 1 0.09845783528264249 0.0026544331919559133 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 2482 3811 AEQPSQPSSTP True H1975_Epitope_Rep3 1127.5094817947102 1127.5083899358601 19.752 2 0.09845047980562768 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 73736 8543 NHANGLTL True PC9_epitope_Rep1 838.4297153523801 838.42860993586 37.698 2 0.09844287783925326 0.0026544331919559133 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 76173 9362 NRSNTVVIM True PC9_epitope_Rep2 1032.53861417836 1032.53750993586 41.346 2 0.09844239758296797 0.0026544331919559133 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 53390 13745 KVDIDVPDV True PC9_epitope_Rep4 998.5284263341399 998.5273299358599 60.767 2 0.09843628067125619 0.0026544331919559133 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant'] 42425 15879 IEQEGYWLP True H1975_Epitope_Rep2 1133.53932537101 1133.53822993586 66.278 2 0.09843241898464011 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 102655 21477 SQDGSFYFL True PC9_epitope_Rep4 1062.46582607758 1062.4652749679299 90.802 1 0.09843236618134055 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 52088 18539 KLLPQLTYL True PC9_epitope_Rep6 1087.66413196131 1087.66302993586 83.952 2 0.09843197225845941 0.0026544331919559133 0.9438714419765777 ['ENST00000483551.6_1_15:69072422-69081590:-|nuORF', 'ENSG00000140350|ENST00000465139|ANP32A', 'ENST00000486769.1_1_9:100760930-100767440:+|nuORF', 'nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B'] 71914 7517 M[Oxidation]PQSGTGVSV True PC9_epitope_Rep2 977.44879649489 977.44768993586 34.281 2 0.09842118897506053 0.0026544331919559133 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 69171 7863 LVLVGDGGTGK True NCI_RA007_Epitope_Rep2 1014.57095985246 1014.56986993586 35.215 2 0.0984114852371526 0.0026544331919559133 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 38518 4440 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 24.233 2 0.09839986340686004 0.0026544331919559133 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 4264 22239 AIIGGMFTV True PC9_epitope_Rep5 907.48372507119 907.48317496793 90.549 1 0.0983959635521686 0.0026544331919559133 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 73753 8271 NHAPSVQI True PC9_epitope_Rep1 864.44536541652 864.44426993586 36.647 2 0.09839509568963317 0.0026544331919559133 0.9438714419765777 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 89014 4893 REEDPFRSTA True H1975_Epitope_Rep3 1206.5629143499 1206.56125490379 23.948 3 0.09839268308417548 0.0026544331919559133 0.9438714419765777 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000470601.5_1_3:51977371-51978822:+|nuORF'] 69909 8660 LYDIDVAK True H1975_Epitope_Rep1 935.49639792987 935.49530993586 38.24 2 0.09838926858979545 0.0026544331919559133 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 48968 15940 KEYWFVLTA True NCI_RA007_Epitope_Rep5 1155.59644632431 1155.5953499358602 68.038 2 0.09838476035249627 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 38531 7692 HHDSSTFTL True PC9_epitope_Rep4 1043.46722305991 1043.4661299358602 36.969 2 0.09837998052522506 0.0026544331919559133 0.9438714419765777 ['ENSG00000106397|ENST00000223127|PLOD3'] 126597 6572 VPPPPPIAR True NCI_RA007_Epitope_Rep1 942.56508662638 942.56398993586 29.577 2 0.09837136376681038 0.0026544331919559133 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 8113 3537 ATEQPLTAK True NCI_RA007_Epitope_Rep4 957.5131106231698 957.51200993586 19.608 2 0.09836818774327666 0.0026544331919559133 0.9438714419765777 ['ENSG00000120725|ENST00000394817|SIL1'] 106427 9034 SVTSEGIKAV True PC9_epitope_Rep1 989.5393253710098 989.53822993586 39.599 2 0.09835049637530222 0.0026544331919559133 0.9438714419765777 ['AMN1|p.A111T|1|0.11|ENSG00000151743|chr12:31697943-31697943|C/T|missense_variant', 'nc|ENSG00000151743|Q8IY45-2|AMN1', 'ENSG00000151743|ENST00000281471|AMN1'] 41104 17404 HYMPPPYASL True PC9_epitope_Rep3 1174.5481162328997 1174.5470099358602 72.114 2 0.09834706426353948 0.0026544331919559133 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 76178 8382 NRSNTVVIM True PC9_epitope_Rep6 1032.53861417836 1032.53750993586 41.906 2 0.09833888635314454 0.0026544331919559133 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 96960 9836 SEVEVIHVP True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52766993586 45.763 2 0.09831941760252987 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 87299 21316 QSVDLVFPV True PC9_epitope_Rep4 1002.5385970950199 1002.53750993586 90.158 2 0.09831807428580704 0.0026544331919559133 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 61 12926 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44850496793 54.833 1 0.09831327874097913 0.0026544331919559133 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 43254 20940 IHDGFGFML True PC9_epitope_Rep2 1035.48478770035 1035.4836899358602 85.993 2 0.09831278798479182 0.0026544331919559133 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 75352 13239 NQAKYIPEL True PC9_epitope_Rep6 1074.57095985246 1074.5698699358602 62.573 2 0.09829960422705251 0.0026544331919559133 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 88386 17183 QYNTYPIKL True PC9_epitope_Rep3 1138.60225998074 1138.60116993586 71.251 2 0.09829536846527563 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1'] 107714 16302 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.57388993586 70.666 2 0.09829500910269572 0.0026544331919559133 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 133285 11417 WELGQVHPP True H1975_Epitope_Rep3 1061.52942939365 1061.52832993586 49.032 2 0.09827329053811218 0.0026544331919559133 0.9438714419765777 ['ENST00000573236.5_1_16:4393478-4393541:-|nuORF', 'ENST00000573450.5_1_16:4391489-4393601:-|nuORF'] 71828 21634 MPALGWAVA True PC9_epitope_Rep5 914.4684093602199 914.46786496793 88.258 1 0.09826673576242952 0.0026544331919559133 0.9438714419765777 ['AOC1|p.L708Wfs*7|1|0.34|ENSG00000002726|chr7:150861073-150861073|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 47762 12424 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65880490379 52.652 3 0.09826397762806839 0.0026544331919559133 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 137234 13859 YLETVAAYY True H1975_Epitope_Rep3 1091.51752729727 1091.5169749679299 58.617 1 0.0982597154763246 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 65031 17585 LSDIYIIPPAY True H1975_Epitope_Rep2 1263.67509056783 1263.6739899358602 72.953 2 0.09824183557508723 0.0026544331919559133 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 2670 7318 AETAAVTVAA True H1975_Epitope_Rep3 902.4709114580199 902.4703649679301 33.122 1 0.09824025839963837 0.0026544331919559133 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 8839 15473 AVFPSIVGR True PC9_epitope_Rep4 944.5443511817999 944.54324993586 67.444 2 0.09823738478315631 0.0026544331919559133 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 70759 5292 MEDANVRVA True H1975_Epitope_Rep3 1003.4756795686299 1003.47458993586 25.435 2 0.0982359392581936 0.0026544331919559133 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 6831 18489 AQIDGTLSTI True PC9_epitope_Rep5 1017.5342399905701 1017.53314993586 76.141 2 0.09822846288451502 0.0026544331919559133 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 110108 9753 TIAPALVSK True PC9_epitope_Rep1 898.5487678559 898.54766993586 42.374 2 0.09822791083556526 0.0026544331919559133 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 108787 8299 TEQDVLTVKP True H1975_Epitope_Rep2 1128.60265390356 1128.60154993586 36.873 2 0.09822612587069648 0.0026544331919559133 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 105748 11312 SVIDGNLELVK True NCI_RA007_Epitope_Rep3 1185.6605031328502 1185.6594099358601 51.605 2 0.09821751798288558 0.0026544331919559133 0.9438714419765777 ['ENSG00000198435|ENST00000356628|NRARP'] 11878 8634 DHNVSSVAI True PC9_epitope_Rep6 940.46140940348 940.46030993586 43.028 2 0.09821615284826077 0.0026544331919559133 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 84925 10183 QHTPTSITL True PC9_epitope_Rep4 996.52400966004 996.52290993586 46.847 2 0.09821089479892922 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'SETD5|p.K832Rfs*8|1|0.2|ENSG00000168137|chr3:9464441-9464441|A/-|frameshift_variant', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E', 'ENST00000443339.5_1_3:9475802-9506425:+|nuORF'] 43267 12253 IHDGM[Oxidation]NLEL True PC9_epitope_Rep1 1056.49099566004 1056.4898899358602 51.991 2 0.09819838796205357 0.0026544331919559133 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 9031 17188 AVIGDVIRV True PC9_epitope_Rep4 940.57056592964 940.56946993586 74.119 2 0.09819662391790754 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 113740 9212 TRDGVLKL True PC9_epitope_Rep5 900.5392658013599 900.53816993586 40.38 2 0.09819196041635661 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 107365 19112 SYSHIMALI True PC9_epitope_Rep4 1033.52665251233 1033.52554993586 81.605 2 0.0981889073611396 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000489324.1_1_1:155289446-155290397:+|nuORF'] 26794 11939 FLDTNETPY True H1975_Epitope_Rep2 1098.48695544498 1098.48637496793 51.002 1 0.0981734563075928 0.0026544331919559133 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 104045 10996 SRTATITVL True PC9_epitope_Rep4 960.5603951687599 960.55928993586 50.073 2 0.09817019338861964 0.0026544331919559133 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 106553 22430 SVVTSIFGV True PC9_epitope_Rep3 907.5014833103099 907.50038993586 91.553 2 0.09816767868859859 0.0026544331919559133 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 95025 4391 RYQTKFRHL True NCI_RA007_Epitope_Rep4 1247.6887239997097 1247.68708490379 23.243 3 0.09816330246800238 0.0026544331919559133 0.9438714419765777 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89', 'nc|ENSG00000121289|Q96ST8-3|CEP89'] 97825 12837 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 57.243 2 0.09816262775999544 0.0026544331919559133 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 52583 9853 KPYESYIGA True PC9_epitope_Rep4 1026.5022115862998 1026.50110993586 45.549 2 0.09816238100634286 0.0026544331919559133 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion'] 46749 20097 IVAPGTFEV True PC9_epitope_Rep5 931.5014833103099 931.5009349679301 82.349 1 0.09814503967967347 0.0026544331919559133 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 22962 17204 EVIEKFDYV True PC9_epitope_Rep2 1140.5702911461199 1140.56918993586 71.433 2 0.09813478556644079 0.0026544331919559133 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000472620.5_1_22:41980283-41985061:-|nuORF', 'ENST00000485648.5_1_22:41980283-41985809:-|nuORF', 'ENST00000478337.1_1_22:41980122-41985809:-|nuORF', 'ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 55044 23206 LALFPGVAL True PC9_epitope_Rep2 899.5480395799099 899.54694993586 94.745 2 0.09813269493527993 0.0026544331919559133 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 7148 13799 AQYLINVRL True NCI_RA007_Epitope_Rep2 1088.63422881536 1088.63312993586 58.324 2 0.09811632030901078 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 34921 18826 GQWASVIRV True PC9_epitope_Rep3 1014.5610638750999 1014.55996993586 77.638 2 0.09811145521854862 0.0026544331919559133 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 128 19813 AAAWPLLL True H1975_Epitope_Rep3 853.5061747679299 853.5056249679301 82.951 1 0.09811131880819245 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 35544 15516 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.51670993586 64.505 2 0.09810613252560879 0.0026544331919559133 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 34953 16566 GQWVGTVLL True NCI_RA007_Epitope_Rep3 971.5440168286299 971.54346496793 72.953 1 0.09810496180173296 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF'] 65359 12535 LSEPEEAAALY True H1975_Epitope_Rep2 1191.5659340416698 1191.56537496793 53.31 1 0.09809951603739461 0.0026544331919559133 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant'] 25349 11873 FEGGVVIAA True H1975_Epitope_Rep3 861.4596184983299 861.4590749679301 50.819 1 0.09808578816632196 0.0026544331919559133 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 26198 10207 FHTDPEAL True PC9_epitope_Rep2 928.42904664604 928.4279499358599 44.598 2 0.09808251583778356 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000187624|Q6ZQX7-2|LIAT1', 'ENSG00000187624|ENST00000360127|C17orf97', 'nc|ENSG00000187624|Q6ZQX7-3|LIAT1', 'nc|ENSG00000187624|Q6ZQX7|LIAT1'] 97834 13871 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 58.375 2 0.09808108782158691 0.0026544331919559133 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 35678 4110 GTNPGIITK True NCI_RA007_Epitope_Rep3 899.50763131991 899.50652993586 22.704 2 0.09808081053672502 0.0026544331919559133 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 31258 6571 [Acetylation]-GDREQLLQR True H1975_Epitope_Rep3 1155.5996345280898 1155.5985299358601 30.231 2 0.09807587151711444 0.0026544331919559133 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH'] 97632 6176 SHANSAVVL True PC9_epitope_Rep4 896.47158016436 896.47048993586 30.786 2 0.09806429483494374 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 123099 11322 VHAQIVSTL True PC9_epitope_Rep2 966.5498304850599 966.54872993586 48.872 2 0.09806120732227327 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 86014 14860 QPITPGPSI True PC9_epitope_Rep3 908.4967322830399 908.49562993586 62.295 2 0.09806042859159163 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 48790 7938 KEQVPGFTP True H1975_Epitope_Rep2 1001.5181960036098 1001.51708993586 35.481 2 0.09804985926965376 0.0026544331919559133 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 106786 20811 SYGDILHVI True PC9_epitope_Rep1 1015.53384606775 1015.5332749679301 84.877 1 0.09804948923635011 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 99191 21984 SLASLLVSV True PC9_epitope_Rep4 887.5327834385901 887.53168993586 92.78 2 0.09804120327660469 0.0026544331919559133 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 24568 18714 FALPGLLHA True PC9_epitope_Rep6 937.5385375253701 937.53744993586 84.626 2 0.09803274329249458 0.0026544331919559133 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 125996 9512 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.49088993586 44.198 2 0.09803049881268554 0.0026544331919559133 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 48529 11543 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 51.049 2 0.09802689810456947 0.0026544331919559133 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 1295 14879 AEDTISILP True H1975_Epitope_Rep3 957.5018772331299 957.50078993586 62.619 2 0.0980214867740664 0.0026544331919559133 0.9438714419765777 ['ENSG00000258289|ENST00000549115|CHURC1', 'nc|ENSG00000258289|Q8WUH1-2|CHURC1', 'nc|ENSG00000258289|Q8WUH1-1|CHURC1'] 29116 11062 FTSDTGLEY True H1975_Epitope_Rep2 1031.4447562798298 1031.44417496793 47.58 1 0.09802031855441053 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000088305|Q9UBC3-7|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-4|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-8|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-3|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-5|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-2|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-6|DNMT3B', 'ENSG00000088305|ENST00000328111|DNMT3B'] 54598 9310 LADDSVRSL True PC9_epitope_Rep4 974.50327421546 974.50216993586 43.417 2 0.0980179503616519 0.0026544331919559133 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL'] 32271 15233 GFQNALIVR True PC9_epitope_Rep3 1016.5767139392399 1016.57560993586 63.743 2 0.09801100797345885 0.0026544331919559133 0.9438714419765777 ['CON__P02769'] 124638 20878 VLIENVASL True PC9_epitope_Rep1 956.5542471591599 956.55369496793 85.127 1 0.09800463586442697 0.0026544331919559133 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 91107 13886 RLMNDMTAV True PC9_epitope_Rep1 1049.49978614149 1049.49868993586 58.252 2 0.09800153223649684 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 109959 9283 THSLETQEL True PC9_epitope_Rep3 1056.5087535187201 1056.5076499358602 40.648 2 0.09799924493856388 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 46764 14213 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.4580849679301 59.493 1 0.09799346193051063 0.0026544331919559133 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 1476 13276 [Acetylation]-AEELVLER True H1975_Epitope_Rep1 999.5236756231699 999.52317496793 56.167 1 0.0979929517701965 0.0026544331919559133 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 84657 4948 QHEGGVQEL True PC9_epitope_Rep2 995.46722305991 995.46612993586 24.396 2 0.09798707962851695 0.0026544331919559133 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC'] 98031 16483 SHTDVVPVF True PC9_epitope_Rep5 999.50254593947 999.50144993586 68.4 2 0.09798588596240786 0.0026544331919559133 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 27319 15501 FMDPASALY True H1975_Epitope_Rep1 1013.45281886573 1013.4522749679301 64.898 1 0.09795836041040368 0.0026544331919559133 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 113707 11565 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 49.498 2 0.09795647406512263 0.0026544331919559133 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 26465 19473 FIPPDGNFRL True PC9_epitope_Rep2 1174.61349337078 1174.6123899358602 80.282 2 0.09794593689191552 0.0026544331919559133 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 102740 19103 SQDYPTLAF True PC9_epitope_Rep6 1040.48147614172 1040.48097496793 86.129 1 0.09794457344087668 0.0026544331919559133 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 38077 2872 HENESVYKA True H1975_Epitope_Rep1 1075.4934378077498 1075.4923499358601 14.649 2 0.09794362220355388 0.0026544331919559133 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000578492.5_1_17:62746826-62750158:-|nuORF'] 53799 12647 KYFLWEEKF True NCI_RA007_Epitope_Rep3 1288.6492101731599 1288.64755490379 56.99 3 0.09793852955087154 0.0026544331919559133 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 99919 23827 SLIDIVTEI True PC9_epitope_Rep1 1001.56447748969 1001.56338993586 96.45 2 0.09792773804330789 0.0026544331919559133 0.9438714419765777 ['ENSG00000068745|ENST00000328631|IP6K2'] 43877 16642 ILDEVIMGY True H1975_Epitope_Rep2 1051.5259838059899 1051.52547496793 69.245 1 0.0979254725380251 0.0026544331919559133 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 84682 10651 QHFDSVM[Oxidation]QL True PC9_epitope_Rep4 1119.5018946969099 1119.5007899358602 48.719 2 0.09790736915245464 0.0026544331919559133 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 21911 11106 ESGDLLVSY True H1975_Epitope_Rep1 981.46549172441 981.46494496793 47.683 1 0.09790296548274136 0.0026544331919559133 0.9438714419765777 ['PCDHGB2|p.D88Y|1|0.09|ENSG00000253910|chr5:141360397-141360397|G/T|missense_variant'] 120393 16982 VFSGLVSTGLK True PC9_epitope_Rep3 1106.63356010902 1106.6324699358602 70.481 2 0.09790230814335439 0.0026544331919559133 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 83106 19509 PYNPILGETF True PC9_epitope_Rep6 1149.57062549929 1149.5695299358601 87.703 2 0.09790104268653864 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 39915 19240 HQLESILAM True PC9_epitope_Rep5 1040.5324661687598 1040.53136993586 79.045 2 0.0978993462877979 0.0026544331919559133 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 132767 17650 VYSPHVLNL True PC9_epitope_Rep5 1040.5654805492 1040.5643899358602 72.903 2 0.09788751944505925 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 99116 19642 SLAGGIIGV True PC9_epitope_Rep4 785.46470387877 785.4641549679301 83.671 1 0.09788361982590577 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 26939 10753 FLIDGVTGR True NCI_RA007_Epitope_Rep2 976.5341804209199 976.53308993586 46.427 2 0.0978759509844258 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 2214 7754 AENVAVPEA True H1975_Epitope_Rep1 898.4396113297399 898.43850993586 34.785 2 0.09786296616608575 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 77287 19933 NYISGIQTI True PC9_epitope_Rep5 1007.52876068731 1007.52766993586 81.727 2 0.0978564129697513 0.0026544331919559133 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 6068 14498 APMPPIIHA True PC9_epitope_Rep2 945.51060852537 945.50950993586 61.035 2 0.09784709620914123 0.0026544331919559133 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 60249 13541 LIDVGTGYY True H1975_Epitope_Rep2 999.49131254943 999.4907749679301 57.222 1 0.09784502044785943 0.0026544331919559133 0.9438714419765777 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 76055 16070 NRLISQIV True PC9_epitope_Rep3 941.5658149023699 941.56470993586 66.963 2 0.0978440510032127 0.0026544331919559133 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 27836 19683 FQLEHIM[Oxidation]DL True PC9_epitope_Rep1 1160.5535959166 1160.5524899358602 80.535 2 0.09779854708990623 0.0026544331919559133 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 27243 22116 FLVPTFEQL True PC9_epitope_Rep4 1092.5855472874398 1092.5844499358602 93.285 2 0.09779025164142185 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 73220 6801 NEGVATYAA True H1975_Epitope_Rep3 894.4083112014598 894.40776496793 31.113 1 0.09778668555611794 0.0026544331919559133 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 96085 7569 SEDISHITP True H1975_Epitope_Rep2 997.47163973401 997.47054993586 34.068 2 0.0977832488138442 0.0026544331919559133 0.9438714419765777 ['ENSG00000138175|ENST00000260746|ARL3'] 84497 10978 QGRTEVVSL True PC9_epitope_Rep3 987.5349086969098 987.53380993586 47.213 2 0.09778255714359334 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF'] 95266 11242 SADPNVVDL True H1975_Epitope_Rep3 928.45017601344 928.44962496793 48.345 1 0.0977818173779632 0.0026544331919559133 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 77275 12958 NYISGIQTI True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52817496793 58.244 1 0.09778053906540886 0.0026544331919559133 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 44522 12528 IPAGTVTVNAA True PC9_epitope_Rep3 1012.55530978832 1012.55420993586 53.213 2 0.09777843051323089 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 118050 12227 VATKIFQEL True NCI_RA007_Epitope_Rep2 1047.59644632431 1047.5953499358602 52.159 2 0.09776992639426295 0.0026544331919559133 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 28781 13938 FTDEEVDELY True H1975_Epitope_Rep3 1258.52412879934 1258.52357496793 58.927 1 0.09776064705573138 0.0026544331919559133 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 31304 9160 GDYPLEAVR True NCI_RA007_Epitope_Rep1 1018.5083595959 1018.50726993586 39.631 2 0.09775857205975041 0.0026544331919559133 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF'] 25287 6712 FEEAAGAAP True H1975_Epitope_Rep2 861.3868474808897 861.3862949679301 30.729 1 0.09775682876758386 0.0026544331919559133 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'TBL2|p.G324V|2|0.18|ENSG00000106638|chr7:73570880-73570880|C/A|missense_variant'] 11944 14677 DHSPDSLPL True PC9_epitope_Rep5 979.46107505031 979.45996993586 61.46 2 0.0977436160119126 0.0026767982039547535 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 95079 12684 RYSSMAASF True PC9_epitope_Rep3 1018.4542158480599 1018.45310993586 53.812 2 0.09774059796412381 0.0026767982039547535 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 34553 20622 GQFGVGFYSA True PC9_epitope_Rep1 1031.4712458111896 1031.4706749679299 84.141 1 0.09773474758412116 0.0026767982039547535 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 34869 11650 GQVIKGIGV True PC9_epitope_Rep2 869.5334521449298 869.53234993586 50.141 2 0.09773150285438552 0.0026767982039547535 0.9438714419765777 ['ENSG00000171497|ENST00000307720|PPID'] 45472 8769 ISEKIKEPLYY True H1975_Epitope_Rep3 1381.74931813725 1381.7476649037899 38.736 3 0.09772784433883286 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000120526|Q96RS6-3|NUDCD1', 'ENST00000519607.5_1_8:110255240-110326067:-|nuORF', 'nc|ENSG00000120526|Q96RS6-2|NUDCD1', 'ENSG00000120526|ENST00000239690|NUDCD1'] 72056 13068 MRAFADAL True PC9_epitope_Rep6 893.4429228883698 893.44182993586 61.873 2 0.0977264460402604 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 123209 15010 VHLDSAVAL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 62.739 2 0.09772632512592877 0.0026767982039547535 0.9438714419765777 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 37954 4307 HEEVSQPVSA True H1975_Epitope_Rep2 1081.50400249145 1081.50290993586 21.678 2 0.09772283086346728 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44', 'ENST00000529348.1_1_11:130109693-130131768:-|nuORF', 'nc|ENSG00000196323|Q8NCP5-3|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-4|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-2|ZBTB44'] 52874 7147 KRFDDKYTL True PC9_epitope_Rep2 1184.6189726740397 1184.61733490379 32.883 3 0.09771268065031309 0.0026767982039547535 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 73280 5505 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.5074749679301 26.187 1 0.09770081643823099 0.0026767982039547535 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 6012 7791 APLLQPRAA True PC9_epitope_Rep4 935.5552502186699 935.55414993586 37.367 2 0.09770048671789447 0.0026767982039547535 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 31722 10882 GEISALTAEA True H1975_Epitope_Rep1 960.47639076128 960.47584496793 46.817 1 0.09769998973155261 0.0026767982039547535 0.9438714419765777 ['ENSG00000125968|ENST00000376112|ID1'] 34858 9223 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42828993586 40.423 2 0.09766540674244248 0.0026767982039547535 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 123351 9577 VHYPGEAVAT True PC9_epitope_Rep5 1042.5083595959 1042.5072699358602 41.798 2 0.09764296434734239 0.0026767982039547535 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 106655 18572 SYADQMFLL True NCI_RA007_Epitope_Rep4 1086.50558271458 1086.5050749679299 80.346 1 0.0976408989100521 0.0026767982039547535 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 11761 15514 DHIHIIAL True PC9_epitope_Rep2 930.52870111766 930.52760993586 64.95 2 0.09763622075446365 0.0026767982039547535 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 22795 14590 EVDPNIQAV True PC9_epitope_Rep5 983.4923751785898 983.49126993586 61.122 2 0.09762884856626039 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000441609.1_1_6:162989483-162989972:+|nuORF', 'ENST00000433288.2_1_1:151922871-151923141:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 24438 17019 FAGMPITL True H1975_Epitope_Rep1 848.44661128648 848.44606496793 70.887 1 0.09759650515973056 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 86461 12287 QQSEVTRIL True PC9_epitope_Rep5 1072.58767254576 1072.58656993586 52.25 2 0.09759326447983079 0.0026767982039547535 0.9438714419765777 ['ENSG00000142669|ENST00000270792|SH3BGRL3'] 100140 19031 SLLDKIIGA True PC9_epitope_Rep6 928.5593325396 928.55878496793 85.845 1 0.09758880402221018 0.0026767982039547535 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 39882 21621 HQILTPFLL True PC9_epitope_Rep5 1080.6331661862 1080.63206993586 88.205 2 0.09758830192261192 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS'] 126336 9843 VPKNSDPWAA True PC9_epitope_Rep1 1083.53490869691 1083.53380993586 42.722 2 0.09757317258289021 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 75730 8654 NQWDGTQHGV True PC9_epitope_Rep5 1140.49483479008 1140.49372993586 38.231 2 0.0975731060940321 0.0026767982039547535 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 70815 11046 MEENFAVEA True H1975_Epitope_Rep3 1038.4328116971399 1038.43227496793 47.579 1 0.09755761029008723 0.0026767982039547535 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 126506 12256 VPNKFLVTA True PC9_epitope_Rep4 987.5753169569099 987.57420993586 54.961 2 0.0975520514890151 0.0026767982039547535 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 96239 8810 SEEPGAPLP True H1975_Epitope_Rep1 895.4287122928699 895.42760993586 38.813 2 0.09754853848649982 0.0026767982039547535 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 70735 15121 M[Oxidation]EALPLLAA True H1975_Epitope_Rep3 943.5048548190299 943.50430496793 63.562 1 0.09753705037394585 0.0026767982039547535 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 34928 19038 GQWIAETGV True PC9_epitope_Rep1 959.4712458111899 959.47014993586 78.02 2 0.0975356268527481 0.0026767982039547535 0.9438714419765777 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 88251 12198 QYESKVFYL True NCI_RA007_Epitope_Rep4 1175.5862755634298 1175.5851699358602 53.914 2 0.09753524517706266 0.0026767982039547535 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 118229 8953 VAYLQAHAL True NCI_RA007_Epitope_Rep3 984.5392658013599 984.53816993586 42.31 2 0.09753097919575655 0.0026767982039547535 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 105835 13827 SVIQNLRTV True PC9_epitope_Rep5 1028.5978433066398 1028.59674993586 58.206 2 0.09752259734966623 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 40620 5571 HTEVPARNLY True H1975_Epitope_Rep3 1198.6094706195 1198.60783490379 26.47 3 0.09752175773392797 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 114459 9307 TSERGSFSLY True H1975_Epitope_Rep2 1145.53530261973 1145.5342099358602 40.757 2 0.09751426947201321 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'TCF12|p.S223Tfs*22|1|0.16|ENSG00000140262|chr15:57231240-57231240|G/-|frameshift_variant'] 104636 11887 SSVVTVPSSNF True NCI_RA007_Epitope_Rep4 1122.55570371114 1122.55460993586 52.72 2 0.09751350667861673 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211893|P01859|IGHG2'] 963 6760 AEAAGAVQV True H1975_Epitope_Rep2 814.41848196234 814.41738993586 30.917 2 0.09751285889104541 0.0026767982039547535 0.9438714419765777 ['ENSG00000181004|ENST00000314218|BBS12'] 103375 20021 SQVPHLPVLV True PC9_epitope_Rep3 1087.6389798426299 1087.6378899358601 82.259 2 0.09751003346573892 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 24283 19664 FAAPEKDIFL True PC9_epitope_Rep2 1149.60701100801 1149.6059099358602 81.022 2 0.09750195263537467 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000183826|Q96Q07-3|BTBD9', 'nc|ENSG00000183826|Q96Q07-2|BTBD9', 'ENSG00000183826|ENST00000481247|BTBD9'] 48912 9863 KEVFLAQPV True NCI_RA007_Epitope_Rep4 1029.5858816406096 1029.58478993586 44.785 2 0.09749824247866778 0.0026767982039547535 0.9438714419765777 ['ENST00000376007.8_1_6:31588511-31590634:+|nuORF'] 49523 8802 KKFENEIIL True NCI_RA007_Epitope_Rep5 1132.6492101731599 1132.64755490379 40.524 3 0.09749465909952623 0.0026767982039547535 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.D1124Y|1|0.33|ENSG00000134516|chr5:170019097-170019097|G/T|missense_variant'] 119097 11035 VEIAYSDVA True H1975_Epitope_Rep3 965.4705771048499 965.47002496793 47.536 1 0.09748824502871105 0.0026767982039547535 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 106535 21686 SVVSQFITV True PC9_epitope_Rep1 978.5385970950199 978.53750993586 88.243 2 0.09748721066688464 0.0026767982039547535 0.9438714419765777 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1'] 75970 11341 NRHAVVMEL True PC9_epitope_Rep5 1067.55459859567 1067.5535099358601 48.62 2 0.09748465594893374 0.0026767982039547535 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2'] 81476 19652 PQPDVFPLF True NCI_RA007_Epitope_Rep5 1058.54368247546 1058.5425899358602 82.506 2 0.09747817129727442 0.0026767982039547535 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 71875 8291 MPNGDHIVSA True PC9_epitope_Rep2 1039.47567956863 1039.4745899358602 37.252 2 0.09747701668851771 0.0026767982039547535 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 114402 8593 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41837496793 38.007 1 0.09747656131367481 0.0026767982039547535 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 6873 11655 AQIGSYVHV True PC9_epitope_Rep6 972.50288029264 972.50178993586 55.958 2 0.09747605596989638 0.0026767982039547535 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 9039 21468 AVIGGLVYL True PC9_epitope_Rep4 903.5429541994699 903.5424049679301 90.766 1 0.09746152465838141 0.0026767982039547535 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'MAGT1|p.R207T|1|0.83|ENSG00000102158|chrX:77856785-77856785|C/G|missense_variant'] 53461 14805 KVIEGLDTGL True PC9_epitope_Rep4 1043.5862755634298 1043.5851699358602 64.886 2 0.09745742408325274 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 95085 6497 RYSSM[Oxidation]AASF True PC9_epitope_Rep2 1034.44913084806 1034.4480299358602 30.405 2 0.09744631457498494 0.0026767982039547535 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 85747 18708 QLVEDLDRI True PC9_epitope_Rep2 1099.5873381925899 1099.58624993586 77.332 2 0.09744229159316892 0.0026767982039547535 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-23|FGFR2', 'nc|ENSG00000066468|P21802-15|FGFR2', 'ENST00000604236.5_1_10:123239373-123278228:-|nuORF', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'BAG4-FGFR1|1|fusion', 'BAG4-FGFR1|2|fusion', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-3|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'ENST00000531196.5_1_8:38271148-38271684:-|nuORF', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion'] 89655 9513 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 41.561 2 0.09741860890151767 0.0026767982039547535 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 18827 9804 ELEEDFIK True H1975_Epitope_Rep1 1021.4967918526899 1021.49568993586 42.639 2 0.09741744141007651 0.0026767982039547535 0.9438714419765777 ['ENSG00000103187|ENST00000262428|COTL1', 'ENST00000567278.1_1_16:84600453-84600705:-|nuORF'] 97634 7458 SHANSAVVL True PC9_epitope_Rep5 896.47158016436 896.47048993586 33.641 2 0.09740253843471378 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 94727 11145 RYLEVMRKL True PC9_epitope_Rep2 1206.6906981456598 1206.68905490379 48.196 3 0.09739796487277534 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 71881 9271 MPNGDHIVSA True PC9_epitope_Rep5 1039.47567956863 1039.4745899358602 40.609 2 0.09739522315172339 0.0026767982039547535 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 83134 18807 PYRLIFEKF True PC9_epitope_Rep2 1211.6702799709099 1211.66863490379 77.712 3 0.09739493387815108 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 27988 12162 FQTHTTPVL True PC9_epitope_Rep3 1042.54474510462 1042.54364993586 51.818 2 0.0973946152377092 0.0026767982039547535 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 140883 18788 YYTTPIYRF True PC9_epitope_Rep2 1222.60225998074 1222.60116993586 77.637 2 0.0973935113967771 0.0026767982039547535 0.9438714419765777 ['ENSG00000104957|ENST00000221554|YJU2B'] 99625 20213 SLFRVITEV True PC9_epitope_Rep2 1062.60734536118 1062.6062499358602 83.167 2 0.0973881238427488 0.0026767982039547535 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 39189 9401 HLGALLAR True PC9_epitope_Rep3 849.51847078713 849.51736993586 41.097 2 0.09738644501092955 0.0026767982039547535 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 102805 17349 SQFNKEILL True PC9_epitope_Rep1 1090.60225998074 1090.60116993586 71.545 2 0.09738423864358658 0.0026767982039547535 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 1872 5536 AEIGEHVAP True H1975_Epitope_Rep3 921.45559574705 921.45448993586 26.342 2 0.09738252673965146 0.0026767982039547535 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 109512 12574 THAAQQILL True PC9_epitope_Rep5 993.5607295219299 993.55962993586 53.365 2 0.09737864864629442 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 95580 6439 SASGPLHSV True PC9_epitope_Rep5 853.4293809992101 853.42828993586 29.741 2 0.09737513279775199 0.0026767982039547535 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 138791 16772 YSDEFGNLDF True H1975_Epitope_Rep3 1205.4876837209702 1205.4871749679298 70.058 1 0.09737420281777158 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 95641 12432 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 52.683 2 0.09736304178117061 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 101905 11748 SPLLLQAKA True PC9_epitope_Rep2 939.5753169569099 939.57420993586 50.522 2 0.09736136409759866 0.0026767982039547535 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 107446 18297 SYVQVTSNF True PC9_epitope_Rep1 1043.49237517859 1043.4912699358601 75.168 2 0.0973605629499035 0.0026767982039547535 0.9438714419765777 ['ENSG00000072364|ENST00000265343|AFF4'] 48692 4226 KEMELPAKEA True H1975_Epitope_Rep3 1144.5798102839997 1144.5781649037901 21.374 3 0.09735650521144397 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 35767 20158 GTVEQIVYL True PC9_epitope_Rep4 1020.5491617787197 1020.54806993586 85.674 2 0.09735571710207173 0.0026767982039547535 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 34951 19574 GQWSQGLISA True PC9_epitope_Rep5 1045.5192586327698 1045.5181699358602 80.343 2 0.09734598938983786 0.0026767982039547535 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 26927 17799 FLGYPITL True H1975_Epitope_Rep3 922.5164050984599 922.5158549679301 74.46 1 0.0973458324013682 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 126656 7453 VPQTPLHTA True PC9_epitope_Rep1 962.5185303567798 962.51742993586 33.486 2 0.0973425682049456 0.0026767982039547535 0.9438714419765777 ['MAPKAPK3|p.D345Tfs*5|1|0.16|ENSG00000114738|chr3:50647930-50647930|G/-|frameshift_variant', 'ENSG00000114738|ENST00000621469|MAPKAPK3'] 35300 4541 GSSDVIIHR True NCI_RA007_Epitope_Rep2 982.5195929859399 982.51848993586 22.292 2 0.09733251328950535 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1', 'ENST00000532550.1_1_11:601671-606691:+|nuORF'] 39756 13117 HPYLPINSA True PC9_epitope_Rep1 1010.51853035678 1010.51742993586 55.322 2 0.09732713146379064 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 94978 13496 RYQDAIRVF True PC9_epitope_Rep2 1166.6196413803798 1166.61799490379 57.199 3 0.09730840054975808 0.0026767982039547535 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 96301 7804 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43364496793 35.001 1 0.09730600391149122 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 89597 5975 RESNNMVVP True NCI_RA007_Epitope_Rep5 1044.5022286696399 1044.50112993586 29.666 2 0.0973057883872058 0.0026767982039547535 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000589947.7_1_19:19459550-19465349:+|nuORF'] 125722 9226 VNELTEFAK True NCI_RA007_Epitope_Rep2 1049.53932537101 1049.5387749679298 40.496 1 0.09730568537881994 0.0026767982039547535 0.9438714419765777 ['CON__P02769'] 109668 6535 THEDAVAAM True PC9_epitope_Rep1 943.40693130247 943.40582993586 29.94 2 0.09730481726112934 0.0026767982039547535 0.9438714419765777 ['nc|ENSG00000096746|P31942-2|HNRNPH3', 'ENSG00000096746|ENST00000265866|HNRNPH3', 'nc|ENSG00000096746|P31942-3|HNRNPH3', 'nc|ENSG00000096746|P31942-6|HNRNPH3', 'ENST00000478698.1_1_10:70098871-70101119:+|nuORF', 'nc|ENSG00000096746|P31942-5|HNRNPH3', 'ENST00000490442.5_1_10:70098233-70101119:+|nuORF', 'nc|ENSG00000096746|P31942-4|HNRNPH3', 'ENST00000469172.5_1_10:70098233-70101808:+|nuORF', 'ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF', 'ENST00000515481.5_1_5:179044503-179045371:-|nuORF', 'nc|ENSG00000132463|Q12849-5|GRSF1', 'ENSG00000132463|ENST00000254799|GRSF1'] 113045 13910 TPVETVNIS True PC9_epitope_Rep5 958.49712620586 958.4965749679301 58.525 1 0.09730420039052093 0.0026767982039547535 0.9438714419765777 ['ENSG00000169676|ENST00000304374|DRD5'] 70528 17932 LYTGTVSSF True PC9_epitope_Rep2 973.47566248529 973.47511496793 74.282 1 0.09729973974587827 0.0026767982039547535 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 16643 8384 EESPVQYAA True H1975_Epitope_Rep3 992.4450906329998 992.44398993586 37.232 2 0.09729882532902055 0.0026767982039547535 0.9438714419765777 ['ENSG00000143653|ENST00000366510|SCCPDH'] 42550 14865 IESLIAVFQK True NCI_RA007_Epitope_Rep1 1146.6648602373 1146.66376993586 61.88 2 0.09728704755796892 0.0026767982039547535 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 65071 17026 LSDLGLLSY True H1975_Epitope_Rep2 979.52261267771 979.52150993586 70.746 2 0.09728285674651804 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 17307 13994 EHDPHVLLAV True PC9_epitope_Rep5 1128.5927579262 1128.59110490379 58.85 3 0.09727704301267442 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 139490 15745 YTGTPDWLY True H1975_Epitope_Rep2 1114.4971262058598 1114.4960299358602 65.734 2 0.09727212615798754 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 100176 21708 SLLGDDALVQV True PC9_epitope_Rep2 1128.60265390356 1128.60154993586 88.976 2 0.09727139170883643 0.0027016152210151178 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 24267 22898 FAADIISVL True PC9_epitope_Rep3 947.53278343859 947.53168993586 93.343 2 0.09727057535602367 0.0027016152210151178 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 24459 9627 FAHTNVESL True PC9_epitope_Rep4 1016.4927095317599 1016.49160993586 44.654 2 0.09726874295554082 0.0027016152210151178 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 138482 13401 YRGNVGVVL True PC9_epitope_Rep5 975.5501648382299 975.54906993586 56.564 2 0.09726707870597481 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT', 'ENSG00000128951|ENST00000331200|DUT'] 6401 8833 APSAQVQQVAA True PC9_epitope_Rep5 1068.55637241748 1068.55526993586 38.921 2 0.09725714860453763 0.0027016152210151178 0.9438714419765777 ['ENST00000533632.5_1_11:118889218-118889467:+|nuORF'] 33200 19306 GLAAGGIVAV True PC9_epitope_Rep3 826.4912529797799 826.49014993586 79.483 2 0.09724887142065121 0.0027016152210151178 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 87920 18150 QVPDDLPNV True PC9_epitope_Rep3 995.4923751785899 995.49126993586 75.015 2 0.09724872273655803 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 104399 9558 SSHFLEQTL True NCI_RA007_Epitope_Rep3 1060.5189242796 1060.5178299358602 44.683 2 0.09724669589652851 0.0027016152210151178 0.9438714419765777 ['ENSG00000149262|ENST00000534064|INTS4', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000587624.5_1_7:64601607-64646883:+|nuORF', 'nc|ENSG00000149262|Q96HW7-2|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 40050 8813 HQVTLEESL True NCI_RA007_Epitope_Rep5 1054.5294889633 1054.52838993586 40.564 2 0.09724568316050998 0.0027016152210151178 0.9438714419765777 ['BMP2K-CDS1|1|fusion', 'ENSG00000138756|ENST00000502613|BMP2K', 'nc|ENSG00000138756|Q9NSY1-2|BMP2K', 'nc|ENSG00000138756|Q9NSY1-3|BMP2K'] 43467 8343 IHTDSNTVL True PC9_epitope_Rep5 998.50327421546 998.50216993586 37.032 2 0.09724465233792293 0.0027016152210151178 0.9438714419765777 ['ENSG00000133243|ENST00000255608|BTBD2', 'nc|ENSG00000133243|Q9BX70-2|BTBD2', 'ENST00000589685.2_1_19:1986489-1990887:-|nuORF'] 96312 8012 SEEVGIAEA True H1975_Epitope_Rep3 903.41854153199 903.4179949679301 35.791 1 0.09724327614110688 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 23976 18426 EYPDRIMNTF True PC9_epitope_Rep2 1284.5808729131597 1284.5802749679299 76.207 1 0.09723952976387322 0.0027016152210151178 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 74792 20782 NLNPEFISV True PC9_epitope_Rep2 1031.5287606873098 1031.52817496793 85.38 1 0.09723710368418038 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 38490 6194 HHDDPEVL True PC9_epitope_Rep1 960.4301092752 960.42900993586 28.64 2 0.0972312984938153 0.0027016152210151178 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 27742 10341 FQDRPVSSL True PC9_epitope_Rep2 1047.53490869691 1047.53380993586 45.103 2 0.09721222468671836 0.0027016152210151178 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 113181 13108 TQDGTPITV True PC9_epitope_Rep3 930.4658260775799 930.4652749679301 55.442 1 0.09720731726577865 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 60246 13356 LIDVGTGYY True H1975_Epitope_Rep1 999.49131254943 999.4907749679301 56.483 1 0.09720273662663415 0.0027016152210151178 0.9438714419765777 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 104726 11998 STDHIPILY True H1975_Epitope_Rep3 1057.54441075145 1057.54387496793 51.31 1 0.09719967340078865 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 140319 11164 YYEEQHPEL True PC9_epitope_Rep1 1206.5193182024198 1206.51822993586 47.828 2 0.09719310175176547 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 109538 10824 THANALTVM True PC9_epitope_Rep3 956.4749512926401 956.47384993586 46.606 2 0.09719213994806761 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1'] 26178 15214 FHSDPQHWL True PC9_epitope_Rep1 1165.53049202281 1165.52884490379 63.341 3 0.09719180430651964 0.0027016152210151178 0.9438714419765777 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 1225 14913 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.44834993586 62.516 2 0.09718364718195036 0.0027016152210151178 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 6100 10291 APM[Oxidation]PPIIHA True PC9_epitope_Rep4 961.50552352537 961.50442993586 47.271 2 0.09717120066364199 0.0027016152210151178 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 57314 9812 LEGNLPVSA True H1975_Epitope_Rep1 898.47599683846 898.47544496793 42.669 1 0.09717031658949363 0.0027016152210151178 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 102647 16299 SQDFPGSNL True PC9_epitope_Rep5 963.42977492203 963.42866993586 67.688 2 0.09717023312839694 0.0027016152210151178 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 67338 8259 LTDRELEEY True H1975_Epitope_Rep1 1166.54553295026 1166.5449749679299 36.707 1 0.09716729532827019 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 135713 13187 YEIPSNLTP True H1975_Epitope_Rep2 1032.51277627 1032.51227496793 55.85 1 0.09716712197563812 0.0027016152210151178 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 76701 4840 NTNPNFVR True PC9_epitope_Rep4 960.4777281739599 960.47662993586 25.202 2 0.09716163679599099 0.0027016152210151178 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 105813 23427 SVINFLDQL True PC9_epitope_Rep5 1047.5600608155898 1047.5589699358602 95.093 2 0.0971616353702402 0.0027016152210151178 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 17735 19393 EHSTVITFL True PC9_epitope_Rep2 1045.54441075145 1045.5433099358602 79.973 2 0.0971572453960393 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 36463 23104 GVISGLFEL True PC9_epitope_Rep2 933.5171333744499 933.51658496793 94.36 1 0.09715332313485266 0.0027016152210151178 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 42538 8637 IESDPVTPP True H1975_Epitope_Rep2 953.47057710485 953.46948993586 38.18 2 0.09713569108378146 0.0027016152210151178 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 24301 15941 FADDMYSLY True H1975_Epitope_Rep1 1123.45321278855 1123.4526749679299 66.628 1 0.09712733414110868 0.0027016152210151178 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 21287 15630 ERIPDVAAL True PC9_epitope_Rep4 982.5447451046199 982.54364993586 68.044 2 0.09712586426315346 0.0027016152210151178 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 89618 9130 RETETVFVP True H1975_Epitope_Rep2 1076.5502244078798 1076.5496749679298 40.07 1 0.09712438492283626 0.0027016152210151178 0.9438714419765777 ['ENSG00000176986|ENST00000345254|SEC24C'] 7931 15691 ATDFDVLSY True H1975_Epitope_Rep2 1029.46549172441 1029.46438993586 65.522 2 0.09711129018293865 0.0027016152210151178 0.9438714419765777 ['ENST00000463347.5_1_3:45730948-45748420:+|nuORF', 'ENST00000445499.2_1_3:45730957-45754662:+|nuORF', 'ENST00000463237.5_1_3:45730948-45754703:+|nuORF', 'ENSG00000211456|ENST00000389061|SACM1L'] 70570 9305 LYWSHPRKF True PC9_epitope_Rep2 1232.6454622053996 1232.6438249037901 41.132 3 0.09710269585805584 0.0027016152210151178 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 49519 9465 KKFENEIIL True NCI_RA007_Epitope_Rep2 1132.6492101731599 1132.64810993586 41.428 2 0.09709970313282683 0.0027016152210151178 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.D1124Y|1|0.33|ENSG00000134516|chr5:170019097-170019097|G/T|missense_variant'] 1912 10323 AEINATMSV True H1975_Epitope_Rep2 934.4429824580201 934.44188993586 44.716 2 0.09709229340784463 0.0027016152210151178 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF'] 72589 9376 MVRPVAVAA True PC9_epitope_Rep1 912.5215075622399 912.52040993586 40.922 2 0.09708350891038797 0.0027016152210151178 0.9438714419765777 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 60742 7165 LKDDEVAQLK True PC9_epitope_Rep5 1157.62920300457 1157.6275649037902 32.527 3 0.09708347365170332 0.0027016152210151178 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 25391 20284 FEILPGLSV True H1975_Epitope_Rep2 973.54843350273 973.54788496793 84.059 1 0.0970714979326152 0.0027016152210151178 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 96187 11587 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 49.634 1 0.09706688525738101 0.0027016152210151178 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 103298 17567 SQTSATFQL True PC9_epitope_Rep3 981.4767251144499 981.47562993586 72.758 2 0.09706660157396046 0.0027016152210151178 0.9438714419765777 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 7638 7743 ASLPLAVTK True NCI_RA007_Epitope_Rep3 898.5487678559 898.54766993586 37.579 2 0.09706361909265358 0.0027016152210151178 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 4509 9224 AKLRLEVNL True NCI_RA007_Epitope_Rep3 1054.6498788795 1054.6487899358601 43.379 2 0.09706279820480912 0.0027016152210151178 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 75488 18226 NQINGSFAL True PC9_epitope_Rep4 962.48214484806 962.48104993586 78.177 2 0.09706246247109203 0.0027016152210151178 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 113604 8294 TRATEGMVV True PC9_epitope_Rep5 962.4855159763398 962.48440993586 36.841 2 0.0970553968391308 0.0027016152210151178 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 113379 18484 TQLGPPYHIL True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 76.432 2 0.0970489885476551 0.002724639343792124 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 113105 9646 TQAEQTLNV True PC9_epitope_Rep6 1002.49818883502 1002.49708993586 47.457 2 0.09704236777926055 0.002724639343792124 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 124292 16847 VLDFITHLY True H1975_Epitope_Rep2 1119.5964463243101 1119.5953499358602 70.049 2 0.0970394861219476 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 1571 6271 AEFAEVSK True PC9_epitope_Rep5 879.43379767331 879.43270993586 29.098 2 0.09703312891554106 0.002724639343792124 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 11865 16160 DHNINLVSM True PC9_epitope_Rep2 1041.4913296327702 1041.49022993586 67.414 2 0.0970329420015794 0.002724639343792124 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 26304 12178 FIDTTSKF True PC9_epitope_Rep2 957.48074786573 957.47964993586 52.155 2 0.09703226473857914 0.002724639343792124 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 75647 21489 NQSELAVLL True PC9_epitope_Rep3 985.5444107514498 985.5438649679301 87.949 1 0.0970289707555117 0.002724639343792124 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 31568 10136 GEFSITYKP True H1975_Epitope_Rep1 1040.5178616504397 1040.51727496793 43.926 1 0.09702124898623564 0.002724639343792124 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 84686 10107 QHFDSVM[Oxidation]QL True PC9_epitope_Rep6 1119.5018946969099 1119.5007899358602 49.483 2 0.09701542655805334 0.002724639343792124 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 39487 8607 HPADSVVSV True PC9_epitope_Rep3 909.4555957470501 909.45448993586 38.055 2 0.09701526885898146 0.002724639343792124 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 104875 7876 STESSVAVY True H1975_Epitope_Rep2 941.43419159613 941.43364496793 35.241 1 0.09700610548495625 0.002724639343792124 0.9438714419765777 ['ENSG00000134440|ENST00000256854|NARS1', 'ENST00000411676.6_1_18:55274615-55283204:-|nuORF'] 75484 19396 NQINGSFAL True PC9_epitope_Rep1 962.48214484806 962.48159496793 79.418 1 0.09699369868233164 0.002724639343792124 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 134883 14753 YADGESFLGY True H1975_Epitope_Rep1 1120.4713053808398 1120.4707749679299 61.971 1 0.09699344521064152 0.002724639343792124 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 90881 9349 RLASTLVHL True NCI_RA007_Epitope_Rep4 1008.6080140675199 1008.60690993586 42.815 2 0.0969922197459584 0.002724639343792124 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 14038 12015 DSDDQWGEY True H1975_Epitope_Rep3 1113.3886979556898 1113.3876099358602 51.376 2 0.09698863953568117 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None'] 130490 13442 VTVSDLQHV True PC9_epitope_Rep1 996.5240096600402 996.52290993586 56.564 2 0.09698668501906639 0.002724639343792124 0.9438714419765777 ['ENSG00000068489|ENST00000262293|PRR11'] 138283 18451 YQYLLVTAL True NCI_RA007_Epitope_Rep5 1082.60119735158 1082.60010993586 77.797 2 0.09698051808168585 0.002724639343792124 0.9438714419765777 ['ENSG00000165389|ENST00000298130|SPTSSA'] 7932 13466 ATDFGEALV True H1975_Epitope_Rep2 921.4443623570098 921.44381496793 56.93 1 0.09697787431613461 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 7817 12991 ATADYICKV True PC9_epitope_Rep1 982.4793679667399 982.47826993586 54.841 2 0.09696084774685672 0.002724639343792124 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 73857 18837 NHFPGSFQI True PC9_epitope_Rep1 1045.49812926537 1045.4970299358602 77.241 2 0.09695393345450325 0.002724639343792124 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 1294 14987 AEDTISILP True H1975_Epitope_Rep2 957.5018772331299 957.50078993586 62.798 2 0.09694899150644758 0.002724639343792124 0.9438714419765777 ['ENSG00000258289|ENST00000549115|CHURC1', 'nc|ENSG00000258289|Q8WUH1-2|CHURC1', 'nc|ENSG00000258289|Q8WUH1-1|CHURC1'] 103838 15096 SRIDIANTL True PC9_epitope_Rep5 1001.5505587610501 1001.54946993586 63.074 2 0.09694703308687552 0.002724639343792124 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 74102 12929 NHVRTWSVT True PC9_epitope_Rep3 1098.55704112382 1098.55594993586 54.756 2 0.09694557114002426 0.002724639343792124 0.9438714419765777 ['ENSG00000160410|ENST00000291842|SHKBP1'] 60532 21385 LIPEYLNFI True PC9_epitope_Rep6 1120.61684741572 1120.61574993586 95.13 2 0.09694157285830572 0.002724639343792124 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 139425 13539 YTELEAIM[Oxidation]Y True H1975_Epitope_Rep3 1147.5107280451098 1147.51017496793 57.357 1 0.09693531073125508 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 6609 17866 APWPPKGLVPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 76.762 2 0.09691177660496815 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 70289 14682 LYPEGLAQL True NCI_RA007_Epitope_Rep3 1002.5385970950199 1002.53750993586 65.135 2 0.0969116171236169 0.002724639343792124 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 35826 5971 GTYVSSVPR True NCI_RA007_Epitope_Rep1 964.4977949121999 964.49668993586 27.272 2 0.09690822018614569 0.002724639343792124 0.9438714419765777 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 112297 12245 TMAKESSIIGV True PC9_epitope_Rep4 1134.59546034814 1134.5943699358602 54.917 2 0.0969028857350871 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 28001 18210 FQVRDIENL True PC9_epitope_Rep4 1132.58767254576 1132.58656993586 78.113 2 0.09689519135296885 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000168003|P08195-5|SLC3A2', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2', 'ENST00000535768.1_1_11:62651934-62652955:+|nuORF', 'ENST00000538682.5_1_11:62651934-62653989:+|nuORF'] 97804 13221 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 56.132 2 0.09689347327802136 0.002724639343792124 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 7163 19064 ARDDFAYCL True PC9_epitope_Rep5 1072.46478053176 1072.4636899358602 78.359 2 0.09689064652210776 0.002724639343792124 0.9438714419765777 ['ENSG00000115641|ENST00000530340|FHL2'] 118780 6137 VEEADAAMA True H1975_Epitope_Rep2 905.3800478482899 905.3794949679301 28.583 1 0.09688958124300982 0.002724639343792124 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0', 'HNRNPA0|p.S56Y|1|0.26|ENSG00000177733|chr5:137753900-137753900|G/T|missense_variant'] 59070 13553 LGDLYEEEMR True PC9_epitope_Rep4 1253.5598031154097 1253.5587099358602 60.026 2 0.09688582644882368 0.002724639343792124 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 4298 16494 AIKEILTQV True PC9_epitope_Rep5 1013.6120963884499 1013.61098993586 68.443 2 0.09688246530213626 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1'] 43430 11970 IHSPVVNEL True PC9_epitope_Rep4 1006.54474510462 1006.54364993586 53.835 2 0.0968776656218813 0.002724639343792124 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 75631 9263 NQSDTSVSL True PC9_epitope_Rep6 949.43525422529 949.43414993586 45.782 2 0.09687650111678787 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 105791 16656 SVIGVSPAV True PC9_epitope_Rep3 827.47526856247 827.47416993586 69.203 2 0.09687375621011123 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 106072 18353 SVLVSVSEV True PC9_epitope_Rep4 917.50696261357 917.50641496793 78.661 1 0.09687122068257284 0.002724639343792124 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 31645 8447 GEHGLIIRV True NCI_RA007_Epitope_Rep4 992.57671393924 992.57560993586 39.307 2 0.0968707303466379 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 87067 10774 QSEIASM[Oxidation]LY True H1975_Epitope_Rep2 1056.47976227 1056.4786699358601 46.472 2 0.09687045628580199 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 26745 21149 FLDGNEMTL True PC9_epitope_Rep1 1038.46919720586 1038.46808993586 86.182 2 0.09685759613048962 0.002724639343792124 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 26730 21504 FLDGNELTL True PC9_epitope_Rep2 1020.51277627 1020.51227496793 88.183 1 0.09685702252557561 0.002724639343792124 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 131776 17421 VYAFSIENF True NCI_RA007_Epitope_Rep3 1088.5178616504397 1088.51676993586 76.435 2 0.09685027931201957 0.002724639343792124 0.9438714419765777 ['ENST00000528557.5_1_1:26759436-26769365:+|nuORF', 'nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS'] 8273 4457 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 23.788 2 0.09684889673783083 0.002724639343792124 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 138434 20926 YREDLDFVL True PC9_epitope_Rep1 1168.5764391557198 1168.57534993586 85.313 2 0.09684852878848507 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 31687 5966 GEIEYEVQR True NCI_RA007_Epitope_Rep3 1121.53530261973 1121.5342099358602 30.448 2 0.09683490728743602 0.002724639343792124 0.9438714419765777 ['ENSG00000173546|ENST00000308508|CSPG4'] 21105 10050 ERDPRSLTL True PC9_epitope_Rep1 1085.5829215184901 1085.58182993586 43.525 2 0.09682716930448142 0.002724639343792124 0.9438714419765777 ['ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 127054 17321 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 71.883 2 0.0968242536022542 0.002724639343792124 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 128311 7094 VSDDGTLHM True H1975_Epitope_Rep2 973.41749598617 973.41638993586 32.219 2 0.09682402586635815 0.002724639343792124 0.9438714419765777 ['ENSG00000141101|ENST00000268802|NOB1'] 14037 12045 DSDDQWGEY True H1975_Epitope_Rep2 1113.3886979556898 1113.3876099358602 51.41 2 0.09682401380691841 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None'] 14002 9333 DRTGTGTLSV True PC9_epitope_Rep3 1005.50908787189 1005.50798993586 40.839 2 0.09681777276460213 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 108386 10370 TEDWDQPVA True H1975_Epitope_Rep2 1059.45090428943 1059.44980993586 44.899 2 0.09681316231462035 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 37783 16477 HAYIISSL True PC9_epitope_Rep5 902.4861675993401 902.48506993586 68.377 2 0.09681217303327688 0.002724639343792124 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 38497 6086 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 28.459 2 0.09680455986541851 0.002724639343792124 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 87801 14738 QVIEKFEAL True PC9_epitope_Rep6 1075.5913609438699 1075.59026993586 68.639 2 0.09680071054807061 0.002724639343792124 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP'] 1615 6402 AEFVEVTK True H1975_Epitope_Rep1 921.4807478657299 921.47964993586 29.684 2 0.09679411723366026 0.002724639343792124 0.9438714419765777 ['CON__P02769'] 81251 12003 PPPLPPPPP True PC9_epitope_Rep1 907.51673945163 907.51564993586 51.032 2 0.09679385882234168 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000135723|ENST00000258201|FHOD1', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000122574|ENST00000242140|WIPF3', 'ENSG00000090470|ENST00000204549|PDCD7'] 66586 7226 LSSPATLNSR True PC9_epitope_Rep1 1044.5563724174801 1044.55526993586 32.609 2 0.09678700362704958 0.002724639343792124 0.9438714419765777 ['CON__P00761'] 99188 23028 SLASLLVSV True PC9_epitope_Rep1 887.5327834385901 887.53168993586 93.376 2 0.0967806456706714 0.002724639343792124 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 7002 9908 AQQPTAVQV True PC9_epitope_Rep3 940.4977949121998 940.49668993586 43.067 2 0.09677286295235689 0.002724639343792124 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 6236 4793 APRGPGTVPA True PC9_epitope_Rep5 921.5032146458099 921.50210993586 23.481 2 0.0967719963174908 0.002724639343792124 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 78186 8173 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 36.793 2 0.09677162684682392 0.002724639343792124 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 104877 7852 STESSVAVY True H1975_Epitope_Rep3 941.43419159613 941.43364496793 35.178 1 0.09676520255854923 0.002724639343792124 0.9438714419765777 ['ENSG00000134440|ENST00000256854|NARS1', 'ENST00000411676.6_1_18:55274615-55283204:-|nuORF'] 26050 15889 FHDMGGVQL True PC9_epitope_Rep1 1002.4593012284997 1002.4582099358599 65.927 2 0.09676447769300187 0.002724639343792124 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 95525 10167 SAQGSDVSLTA True PC9_epitope_Rep5 1034.48801807414 1034.4869299358602 44.094 2 0.09675230195735542 0.002724639343792124 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENST00000497377.5_1_6:31322262-31322491:-|nuORF', 'ENST00000496081.5_1_6:29912792-29913229:+|nuORF', 'ENST00000481849.5_1_6:31322262-31322472:-|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H', 'ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 86242 16013 QPYMPTVSA True PC9_epitope_Rep5 992.4637179025999 992.4631649679301 66.584 1 0.09675099889265598 0.002724639343792124 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 7454 12326 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep2 1084.4746768895598 1084.47356993586 52.496 2 0.0967483524889818 0.002724639343792124 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 11948 7106 DHSQAVTL True PC9_epitope_Rep4 869.42429561877 869.42318993586 34.602 2 0.09674273323603996 0.002724639343792124 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 6484 7117 APTGDLPRA True PC9_epitope_Rep5 896.4715801643599 896.47048993586 32.343 2 0.09673664478843928 0.002724639343792124 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 86831 11723 QRPPTIVL True PC9_epitope_Rep6 922.5600012459399 922.55890993586 56.239 2 0.09671931531576898 0.002724639343792124 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 139186 7184 YSTEPNNL True H1975_Epitope_Rep2 936.41887588516 936.41776993586 32.567 2 0.0967087196471806 0.002724639343792124 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 35709 6005 GTSEFITGK True NCI_RA007_Epitope_Rep4 938.4709114580198 938.46980993586 29.717 2 0.09670072915957188 0.002724639343792124 0.9438714419765777 ['ENSG00000110002|ENST00000456829|VWA5A'] 98405 20349 SIIGRLLEV True PC9_epitope_Rep4 998.6124307416198 998.61132993586 86.415 2 0.09668953337465243 0.002749298356148691 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 43873 16554 ILDEVIMGY True H1975_Epitope_Rep1 1051.5259838059899 1051.52547496793 69.05 1 0.09668685015942613 0.002749298356148691 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 104306 16761 SSELFTLTY True H1975_Epitope_Rep2 1059.51244191683 1059.51187496793 69.709 1 0.09668438032534359 0.002749298356148691 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 116562 23061 TYFSTPLLL True PC9_epitope_Rep5 1053.57464825057 1053.57354993586 93.692 2 0.09668184467611217 0.002749298356148691 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 86928 15298 QRSDIATLL True PC9_epitope_Rep4 1015.56620882519 1015.56510993586 66.776 2 0.09668105607482938 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15', 'USP15|p.R710Tfs*14|1|0.16|ENSG00000135655|chr12:62391317-62391318|-/A|frameshift_variant', 'ENST00000546718.5_1_12:62654195-62688116:+|nuORF', 'ENST00000551206.5_1_12:62654195-62696719:+|nuORF', 'ENST00000537297.2_1_12:62654195-62698555:+|nuORF', 'ENST00000548524.5_1_12:62654195-62708744:+|nuORF', 'ENST00000550632.5_1_12:62654195-62749153:+|nuORF', 'nc|ENSG00000135655|Q9Y4E8-4|USP15'] 18778 10979 ELDRFMHYY True H1975_Epitope_Rep2 1272.55974354576 1272.55810490379 47.257 3 0.0966792495222942 0.002749298356148691 0.9438714419765777 ['ENSG00000001629|ENST00000265742|ANKIB1', 'ENST00000422095.1_3_7:92000906-92025787:+|nuORF'] 23655 21553 EYGNIIVTL True PC9_epitope_Rep2 1020.54916177872 1020.5485749679301 88.373 1 0.09667602267177285 0.002749298356148691 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 120994 4998 VGEVIVTK True H1975_Epitope_Rep1 843.50656869075 843.50546993586 24.297 2 0.09666813476735905 0.002749298356148691 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 41105 17494 HYMPPPYASL True PC9_epitope_Rep3 1174.5481162328997 1174.5470099358602 72.467 2 0.09666811777758634 0.002749298356148691 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 30615 7341 GALALEEK True PC9_epitope_Rep3 829.4545331178899 829.45342993586 33.246 2 0.09666690179525746 0.002749298356148691 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 77383 12879 NYLSIFRKF True NCI_RA007_Epitope_Rep3 1186.6498788795 1186.6482449037899 57.916 3 0.0966585148080846 0.002749298356148691 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 52341 10596 KPFGQVIST True PC9_epitope_Rep2 975.5389314481899 975.53782993586 46.073 2 0.09664997595646352 0.002749298356148691 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 33204 19227 GLAAGGIVAV True PC9_epitope_Rep5 826.4912529797799 826.49014993586 78.996 2 0.0966435739911063 0.002749298356148691 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 86922 9620 QRSDGPYAL True PC9_epitope_Rep1 1005.4879585044899 1005.48686993586 41.858 2 0.0966429880682602 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 75383 22035 NQDNLQLFL True PC9_epitope_Rep2 1103.5611234447501 1103.56002993586 90.23 2 0.09663458751831913 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'NDRG3|p.G292Dfs*5|1|0.18|ENSG00000101079|chr20:36656516-36656516|C/-|frameshift_variant', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 28322 10572 FRYTAGTPY True PC9_epitope_Rep6 1074.5134449763398 1074.5123499358601 51.473 2 0.09663335732404975 0.002749298356148691 0.9438714419765777 ['ENSG00000054965|ENST00000356467|FAM168A', 'nc|ENSG00000054965|Q92567|FAM168A'] 6089 10855 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 47.072 2 0.09662929013913632 0.002749298356148691 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 14317 10314 DTDHYFLRY True H1975_Epitope_Rep1 1228.5512870370399 1228.55018993586 44.62 2 0.09662236830528141 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT'] 72172 17311 MRMLAEDEL True PC9_epitope_Rep3 1106.51001647202 1106.5089099358602 71.763 2 0.09661866713516909 0.002749298356148691 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF'] 9037 22169 AVIGGLVYL True PC9_epitope_Rep2 903.5429541994699 903.5424049679301 90.761 1 0.09660875677872442 0.002749298356148691 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'MAGT1|p.R207T|1|0.83|ENSG00000102158|chrX:77856785-77856785|C/G|missense_variant'] 116640 16011 TYIKFVNLF True NCI_RA007_Epitope_Rep3 1143.63283183303 1143.6317299358602 70.655 2 0.09659712984346314 0.002749298356148691 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 95452 20320 SALPFITYL True H1975_Epitope_Rep1 1023.5640835668698 1023.56298993586 84.519 2 0.09659590507371471 0.002749298356148691 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 127316 14150 VQMVITEAQKV True PC9_epitope_Rep5 1244.6798586784398 1244.6787699358601 59.439 2 0.09659448995583082 0.002749298356148691 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 64576 7521 LRDQSAVVV True PC9_epitope_Rep4 985.5556441414899 985.55454993586 36.296 2 0.09659437885111362 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 43415 16975 IHSEPLGVVL True PC9_epitope_Rep4 1062.60734536118 1062.6062499358602 73.284 2 0.0965840309181303 0.002749298356148691 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 78170 5924 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 30.28 2 0.09656350487681067 0.002749298356148691 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 125047 16730 VLPGHFNTF True PC9_epitope_Rep1 1030.5236157372199 1030.5225099358602 69.179 2 0.09653952610629096 0.002749298356148691 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 73904 8111 NHHMQSISF True PC9_epitope_Rep4 1099.4869129586702 1099.48580993586 38.653 2 0.09653078650805541 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 4711 13288 ALDSSSILY True H1975_Epitope_Rep2 967.4862271689899 967.4856749679301 56.242 1 0.09652903294909679 0.002749298356148691 0.9438714419765777 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15', 'ENST00000546932.5_1_12:72265915-72278641:+|nuORF'] 103892 18697 SRLPETLPSL True PC9_epitope_Rep1 1111.6237237013102 1111.62262993586 76.709 2 0.09652123871747553 0.002749298356148691 0.9438714419765777 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 44537 12848 IPAPPLSKV True PC9_epitope_Rep2 920.56950330048 920.56840993586 54.72 2 0.09651869397358208 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF'] 135946 4774 YEYEGGHIKTA True H1975_Epitope_Rep3 1266.5880664685797 1266.58642490379 23.49 3 0.09651465254365416 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B', 'nc|ENSG00000101224|P30305-3|CDC25B'] 84690 17887 QHFDSVMQL True PC9_epitope_Rep3 1103.5069796969099 1103.50588993586 74.004 2 0.09651187937747126 0.002749298356148691 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 113794 10714 TRDSNIIRL True PC9_epitope_Rep1 1086.61455599994 1086.6134499358602 46.099 2 0.0965075826826598 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS'] 89598 5364 RESPFSTSA True H1975_Epitope_Rep2 980.45632402304 980.45522993586 25.676 2 0.09649393349299162 0.002749298356148691 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 35603 5122 GTLDPVEK True NCI_RA007_Epitope_Rep4 857.44944773745 857.44834993586 26.216 2 0.09649222909554961 0.002749298356148691 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 115628 20553 TVISILNTI True PC9_epitope_Rep6 972.58554728744 972.58499496793 91.785 1 0.09648979049942187 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 113419 8372 TQLQTTQSV True PC9_epitope_Rep5 1004.5138388991599 1004.51274993586 37.145 2 0.09648945705048789 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.E636Q|2|0.14|ENSG00000143569|chr1:154254887-154254887|G/C|missense_variant'] 76263 11250 NSDNNTIFV True H1975_Epitope_Rep1 1022.46688870674 1022.46637496793 48.249 1 0.09647195318478628 0.002749298356148691 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 22338 2734 ETEKMIEKY True H1975_Epitope_Rep2 1169.5638258666897 1169.56272993586 14.578 2 0.09647012224953073 0.002749298356148691 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 13944 13689 DRIKDEFQL True PC9_epitope_Rep4 1162.59823722946 1162.5965849037902 60.544 3 0.0964420296779575 0.002749298356148691 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 1882 10813 AEIISPPSP True H1975_Epitope_Rep2 909.48074786573 909.47964993586 46.622 2 0.09643600854648318 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 96297 7985 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 35.663 2 0.09643138043026996 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 135825 11698 YEQGFITDP True H1975_Epitope_Rep2 1068.4763907612798 1068.47528993586 50.071 2 0.09642849948316626 0.002749298356148691 0.9438714419765777 ['ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 40819 15597 HVLDDFVKV True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 67.913 2 0.09642677659062103 0.002749298356148691 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 39393 17076 HLVPEVPTV True PC9_epitope_Rep5 989.55458151233 989.55348993586 70.702 2 0.0964258664831946 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 35735 4085 GTSSVIVSR True NCI_RA007_Epitope_Rep5 904.4977949122 904.49668993586 22.165 2 0.09642040064807325 0.002749298356148691 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 93907 14556 RVIGTLEEV True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 61.117 2 0.09641459963580322 0.002749298356148691 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 6193 5266 APQPQRTL True PC9_epitope_Rep5 909.50321464581 909.50210993586 25.271 2 0.09640378207538411 0.002749298356148691 0.9438714419765777 ['ENST00000583776.1_1_18:2906615-2908961:+|nuORF'] 61178 21202 LLDLLSELY True H1975_Epitope_Rep3 1077.59577761797 1077.59468993586 88.554 2 0.09640115981518768 0.002749298356148691 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 33865 23478 GLVPFLVSV True PC9_epitope_Rep3 929.5586042636099 929.55750993586 95.587 2 0.09639615716638494 0.002749298356148691 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 75268 13677 NPNQYNYIA True PC9_epitope_Rep5 1095.49852318819 1095.49742993586 57.633 2 0.09638527751370907 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 48948 13617 KEYFGIVSV True NCI_RA007_Epitope_Rep5 1040.5542471591598 1040.5531499358601 59.063 2 0.09637655809917436 0.002755681818181818 0.9438714419765777 ['ENSG00000055211|ENST00000367419|GINM1'] 74132 13332 NHYAEIQVV True PC9_epitope_Rep5 1071.53490869691 1071.53380993586 56.294 2 0.09637231421815468 0.002755681818181818 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 36650 21871 GVLPQLSMV True PC9_epitope_Rep1 942.5208388559 942.51974993586 88.94 2 0.09636943093140199 0.002755681818181818 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 115630 23499 TVISLLTGL True PC9_epitope_Rep1 915.56408356687 915.56298993586 95.176 2 0.0963651522772644 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 78190 8587 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 38.39 2 0.09636441135117774 0.002755681818181818 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 48053 10048 KALSDHHIYL True PC9_epitope_Rep1 1195.63495709135 1195.63330490379 43.518 3 0.09636091744496089 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 60553 11681 LIQDRVAEV True PC9_epitope_Rep3 1041.5818588893299 1041.5807699358602 49.951 2 0.09636061350715429 0.002755681818181818 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 5929 13022 APHPPLSVV True PC9_epitope_Rep5 915.51780208079 915.51670993586 55.094 2 0.09635248805550344 0.002755681818181818 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 28501 13426 FSGDPVYL True H1975_Epitope_Rep3 896.4279840168799 896.42743496793 56.913 1 0.09635228499823222 0.002755681818181818 0.9438714419765777 ['ENSG00000242732|ENST00000609883|RTL5'] 108513 11789 TEFPGVVA True H1975_Epitope_Rep3 818.4174193331799 818.4168749679301 50.493 1 0.09635115887421035 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 136350 8827 YHDDDNSVL True PC9_epitope_Rep5 1076.44106788172 1076.43996993586 38.898 2 0.09633622038649421 0.002755681818181818 0.9438714419765777 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 116226 21217 TVTTVILEV True PC9_epitope_Rep1 973.5695628701299 973.56846993586 86.435 2 0.09632251968628479 0.002755681818181818 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 77416 20613 NYMPGQLTI True PC9_epitope_Rep1 1035.5059170677498 1035.50537496793 84.104 1 0.09632213369584525 0.002755681818181818 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 74128 10663 NHVTPPNVSL True PC9_epitope_Rep6 1076.56145779792 1076.56036993586 51.833 2 0.09632095722130599 0.002755681818181818 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 74018 8735 NHSADFETV True PC9_epitope_Rep3 1018.43558857846 1018.43448993586 38.552 2 0.09631406667557858 0.002755681818181818 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 67374 14285 LTDTFTAYY True H1975_Epitope_Rep2 1093.49679185269 1093.49627496793 60.096 1 0.09631181839807307 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 91857 7807 RPNPPPVSV True PC9_epitope_Rep2 961.53451477409 961.53340993586 35.399 2 0.09631055167172653 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 47330 20543 IYGYVAEQF True PC9_epitope_Rep1 1088.5178616504397 1088.51727496793 83.831 1 0.09630355962500758 0.002755681818181818 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 138414 11754 YRDPYTEQTI True PC9_epitope_Rep4 1284.59863115228 1284.5975299358602 52.973 2 0.09629393996759746 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 139636 15005 YTSDYFISY True H1975_Epitope_Rep1 1157.49170647225 1157.4906099358602 62.962 2 0.09627803207498452 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 29613 22921 FVLGHFILL True PC9_epitope_Rep1 1057.63243791021 1057.63134993586 92.964 2 0.09627168807507326 0.002755681818181818 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 107641 21586 TAIDILTTV True PC9_epitope_Rep2 945.5382627418501 945.53716993586 88.502 2 0.09627084685985264 0.002755681818181818 0.9438714419765777 ['ENSG00000198700|ENST00000361565|IPO9'] 130721 5960 VVDLM[Oxidation]AHM[Oxidation]A True NCI_RA007_Epitope_Rep2 1017.46233876449 1017.46124993586 27.792 2 0.09626370735961438 0.002755681818181818 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000432206.1_1_20:13373901-13374318:+|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 88846 5361 READGILKP True NCI_RA007_Epitope_Rep4 997.5556441414899 997.55454993586 27.188 2 0.0962603881109309 0.002755681818181818 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 24266 22758 FAADIISVL True PC9_epitope_Rep2 947.53278343859 947.53168993586 93.031 2 0.09624406759652597 0.002755681818181818 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 135830 7507 YEQGPDTPVSA True H1975_Epitope_Rep3 1162.51423282198 1162.5131299358602 33.857 2 0.09622814390324297 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 29622 22665 FVLPELPSV True PC9_epitope_Rep2 999.56408356687 999.5635749679301 92.677 1 0.09622605920530372 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000536027.1_1_16:71958181-71961713:+|nuORF', 'ENST00000541180.1_1_16:71958590-71961713:+|nuORF'] 106539 8586 SVVSSTEKL True PC9_epitope_Rep5 948.51277627 948.51166993586 37.967 2 0.0962229469942643 0.002755681818181818 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 71932 10497 MPSSVPLRA True PC9_epitope_Rep2 956.5113368013599 956.51022993586 45.698 2 0.09621567832522739 0.002755681818181818 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 113737 14011 TRDGNVFLV True PC9_epitope_Rep6 1019.5399940773499 1019.53888993586 65.747 2 0.09621065385398946 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 11646 11156 DHATTALL True PC9_epitope_Rep5 840.43413202648 840.43302993586 47.896 2 0.0962105144097598 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'ENST00000514280.1_1_5:79646842-79647379:-|nuORF'] 96721 6025 SEQETLVRP True H1975_Epitope_Rep3 1057.54038800017 1057.53928993586 28.19 2 0.09621036269657865 0.002755681818181818 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'MDM2|p.H134Qfs*73|1|0.37|ENSG00000135679|chr12:68824406-68824409|CCTT/-|frameshift_variant', 'MDM2-NUP107|3|fusion', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2', 'nc|ENSG00000135679|Q00987-7|MDM2', 'ENST00000493419.1_1_12:69202221-69210726:+|nuORF', 'nc|ENSG00000135679|Q00987-9|MDM2', 'nc|ENSG00000135679|Q00987-5|MDM2'] 29334 14549 FVDSNLLY True H1975_Epitope_Rep2 969.4807478657299 969.47964993586 61.119 2 0.09621014245383634 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000155792|Q8TB45-2|DEPTOR', 'ENSG00000155792|ENST00000286234|DEPTOR'] 30161 13958 FYSGSPTSY True PC9_epitope_Rep5 1007.4236269124299 1007.42252993586 58.711 2 0.09620802548285091 0.002755681818181818 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1'] 74394 12048 NITRALIVV True H1975_Epitope_Rep2 997.6284151589299 997.62730993586 51.422 2 0.09620784700010004 0.002755681818181818 0.9438714419765777 ['ENST00000586817.5_1_19:1089487-1094188:-|nuORF', 'ENSG00000099817|ENST00000615234|POLR2E', 'POLR2E|p.E97D|1|0.42|ENSG00000099817|chr19:1091849-1091849|C/A|missense_variant'] 22407 16284 ETEYSFLDY True H1975_Epitope_Rep2 1165.4815357113698 1165.48042993586 67.851 2 0.09620655435602003 0.002755681818181818 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF'] 130021 18984 VTPPGFQLV True PC9_epitope_Rep6 956.53311779176 956.53202993586 85.665 2 0.09620636614337848 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 40375 2542 HRTELETKL True PC9_epitope_Rep6 1125.61422164677 1125.61258490379 14.706 3 0.09620300420596045 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 1913 10251 AEINATMSV True H1975_Epitope_Rep3 934.4429824580201 934.44243496793 44.479 1 0.09619945753232277 0.002755681818181818 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF'] 9375 21957 AVVEFLTSV True PC9_epitope_Rep1 963.5276980581499 963.52660993586 89.276 2 0.09618686513121198 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA'] 73743 8734 NHANGLTL True PC9_epitope_Rep3 838.4297153523801 838.42860993586 38.548 2 0.09618657838359995 0.002755681818181818 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 108816 9606 TEQPPSPLP True H1975_Epitope_Rep2 964.48656152216 964.48546993586 41.925 2 0.09618402413416122 0.002755681818181818 0.9438714419765777 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 107926 12387 TAVTVNQSL True PC9_epitope_Rep3 931.4974605590301 931.49636993586 52.677 2 0.09617656750871537 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 35318 12269 GSVDGVIKEV True PC9_epitope_Rep4 1001.5393253710099 1001.53822993586 55.01 2 0.09616728540279994 0.002755681818181818 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 60439 20831 LILDPIFKV True PC9_epitope_Rep4 1056.65831830488 1056.6572299358602 88.277 2 0.09616334415455208 0.002755681818181818 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 16042 9122 EEALPVTTA True H1975_Epitope_Rep1 929.47057710485 929.46948993586 39.991 2 0.0961540536265808 0.002755681818181818 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 105389 10253 SVADTVARV True PC9_epitope_Rep1 916.4977949121999 916.49668993586 44.321 2 0.09614953053739675 0.002755681818181818 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 2620 6845 AESPEEVAC True H1975_Epitope_Rep2 933.37496246785 933.3744149679301 31.245 1 0.09614420090568218 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 73279 5394 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.5074749679301 25.784 1 0.09614311753117874 0.002755681818181818 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 96934 8492 SEVATLTAA True H1975_Epitope_Rep2 861.4443623570099 861.44381496793 37.617 1 0.09613293218229256 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 30527 8777 GAIGSPVRL True H1975_Epitope_Rep2 868.51305105352 868.51194993586 38.724 2 0.0961226772941444 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant'] 76340 12299 NSELSCQLY True H1975_Epitope_Rep2 1055.4593607981499 1055.45877496793 52.392 1 0.09611614041089139 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 25605 10805 FETEFNTQP True H1975_Epitope_Rep3 1111.48220441771 1111.48110993586 46.64 2 0.09610311409563815 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 59701 13902 LGTLSPAFSTR True PC9_epitope_Rep2 1148.6189726740402 1148.6178699358602 58.755 2 0.09610077653328461 0.002755681818181818 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1', 'ENST00000489417.5_1_7:127726971-127732107:+|nuORF'] 42587 7695 IESRTLAIA True NCI_RA007_Epitope_Rep4 972.5603951687599 972.55928993586 36.263 2 0.09610025590141223 0.002755681818181818 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 96807 13704 SESDYIVMP True H1975_Epitope_Rep1 1039.4532127885498 1039.4526749679299 57.85 1 0.0960994425839228 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'SCARB1|p.G128S|1|0.24|ENSG00000073060|chr12:124815017-124815017|C/T|missense_variant', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1'] 54851 11861 LAGDGVGAVNI True H1975_Epitope_Rep1 984.52400966004 984.5234649679301 50.621 1 0.0960986388146119 0.002755681818181818 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 103134 21638 SQMATILNL True PC9_epitope_Rep5 989.5215671318899 989.52101496793 88.273 1 0.09608217668879264 0.002755681818181818 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 77549 21098 NYSGAAEYLYF True PC9_epitope_Rep4 1296.56626839484 1296.56567496793 89.316 1 0.09607525628427677 0.002755681818181818 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 66597 6308 LSSPATLNSR True PC9_epitope_Rep4 1044.5563724174801 1044.55526993586 31.323 2 0.09607288289861195 0.002755681818181818 0.9438714419765777 ['CON__P00761'] 39509 7110 HPDYNNEL True PC9_epitope_Rep2 1000.4250238947601 1000.42392993586 32.745 2 0.09607056469076718 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 115064 18181 TTSDIDYAL True PC9_epitope_Rep5 997.46040634397 997.45930993586 74.943 2 0.0960620204500537 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 7495 13183 ASEDSVLLY True H1975_Epitope_Rep3 995.4811417885501 995.48004993586 55.959 2 0.09604838850516896 0.002755681818181818 0.9438714419765777 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 2404 11104 AEQLAKWIA True H1975_Epitope_Rep2 1028.5654805491997 1028.5643899358602 47.746 2 0.09604128424487067 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 40112 11653 HRDIVNLQV True PC9_epitope_Rep2 1092.6039913162401 1092.60288993586 50.153 2 0.09603398451064328 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1'] 107652 13832 TAIHNFPTV True PC9_epitope_Rep1 998.5185303567799 998.51742993586 58.047 2 0.09603074607271835 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 45142 21342 IQYIPTELDQV True PC9_epitope_Rep5 1317.68163250025 1317.68052993586 87.151 2 0.09602537367786708 0.002755681818181818 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 1710 5798 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41284496793 27.327 1 0.09601975261556747 0.002755681818181818 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 44891 14892 IQDEIRSVI True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 62.548 2 0.09601754409357019 0.002755681818181818 0.9438714419765777 ['ENSG00000164109|ENST00000296509|MAD2L1', 'ENST00000504707.1_1_4:120981275-120987923:-|nuORF'] 125991 10404 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.49088993586 44.959 2 0.09601600953530387 0.002755681818181818 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 35546 15698 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.51670993586 65.205 2 0.09601381889087204 0.002755681818181818 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 95451 20317 SALPFITYL True H1975_Epitope_Rep1 1023.5640835668698 1023.5635749679301 84.504 1 0.09601278331914417 0.002755681818181818 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 107666 20186 TAISLFYEL True NCI_RA007_Epitope_Rep2 1055.5539128059902 1055.55337496793 83.547 1 0.09601168392286306 0.002755681818181818 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 33862 23590 GLVPFLVSV True PC9_epitope_Rep1 929.5586042636099 929.55805496793 95.527 1 0.09600874121160038 0.002755681818181818 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 54476 8196 LAAARLAAA True PC9_epitope_Rep3 826.5024863698198 826.50138993586 36.505 2 0.09600797482390498 0.002755681818181818 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 65296 5215 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 25.127 3 0.09599572127676187 0.002755681818181818 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 36391 21508 GVIAGLNVL True PC9_epitope_Rep2 854.52255310806 854.52144993586 88.198 2 0.09599218253760221 0.002755681818181818 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 71026 13416 MESPFITSP True H1975_Epitope_Rep2 1007.46338354943 1007.46287496793 56.74 1 0.09598610922981386 0.002755681818181818 0.9438714419765777 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 135365 9874 YDGHLPIEIK True NCI_RA007_Epitope_Rep1 1183.62372370131 1183.62208490379 42.41 3 0.0959814576046234 0.002755681818181818 0.9438714419765777 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 107912 21961 TAVPSLFSV True PC9_epitope_Rep1 919.50148331031 919.5009349679301 89.291 1 0.09597759850850955 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1'] 16790 7029 EFHLNESGD True NCI_RA007_Epitope_Rep4 1046.43050319802 1046.4294099358601 33.664 2 0.09597178246735381 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000514799.1_1_5:59755891-59756539:-|nuORF'] 14097 14187 DSDSDQLFY True H1975_Epitope_Rep3 1088.42983449168 1088.42927496793 59.906 1 0.09597155182086932 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 97592 13421 SHADLAGVPL True PC9_epitope_Rep6 978.5134449763399 978.51234993586 63.304 2 0.09596912920989467 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 7141 10287 AQYENPPHI True PC9_epitope_Rep1 1067.50360856863 1067.5025099358602 44.454 2 0.09596789972077793 0.002755681818181818 0.9438714419765777 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'MYO1F|p.A217Pfs*12|1|0.18|ENSG00000142347|chr19:8551862-8551862|C/-|frameshift_variant', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000594774.5_1_19:8618146-8642307:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 78191 8680 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 38.752 2 0.09596706622334406 0.002755681818181818 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 30075 15483 FYMDTSHLF True NCI_RA007_Epitope_Rep5 1159.5008316873098 1159.4997299358602 66.251 2 0.09596401992014462 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 40895 17667 HVQPYIPSI True PC9_epitope_Rep5 1052.5654805492 1052.5643899358602 72.97 2 0.09595951482585055 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'ENST00000465154.1_1_9:130272232-130272589:-|nuORF'] 104192 15470 SSDFDPLVY True H1975_Epitope_Rep3 1041.46549172441 1041.46497496793 64.922 1 0.09595173228894767 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000108375|Q68DV7-3|RNF43', 'nc|ENSG00000108375|Q68DV7-2|RNF43', 'ENSG00000108375|ENST00000407977|RNF43', 'nc|ENSG00000108375|Q68DV7-4|RNF43'] 48512 11836 KEFPGFLEN True NCI_RA007_Epitope_Rep2 1079.5287606873098 1079.52766993586 50.641 2 0.09594833334084511 0.002755681818181818 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 105088 18802 STLDGVLEV True PC9_epitope_Rep6 931.48622716899 931.4856749679301 84.962 1 0.09593311524348126 0.002755681818181818 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6'] 68129 12010 LTPKLFHEV True PC9_epitope_Rep2 1082.6124307416198 1082.61132993586 51.513 2 0.09593108021184209 0.002755681818181818 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 65294 4998 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 24.31 3 0.09592588714489726 0.002755681818181818 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 120326 16057 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 66.752 2 0.09592125670325079 0.002755681818181818 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 8566 17297 AVAAVLTQV True PC9_epitope_Rep4 870.5174677276199 870.51636993586 74.536 2 0.09591861029404578 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 70010 11230 LYGKIAEAF True NCI_RA007_Epitope_Rep4 1010.5436824754598 1010.54258993586 50.086 2 0.09591615390765061 0.002755681818181818 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 3810 22383 AGVPLFLLE True PC9_epitope_Rep4 957.5535188831699 957.55297496793 94.33 1 0.09591514711871779 0.002755681818181818 0.9438714419765777 ['ENSG00000157103|ENST00000287766|SLC6A1'] 108360 5035 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 24.488 2 0.09590797010779814 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 25535 5323 FEQGGARVV True H1975_Epitope_Rep3 961.4981292653698 961.49702993586 25.548 2 0.09590070625472566 0.002755681818181818 0.9438714419765777 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 105906 21437 SVLDGLLYV True PC9_epitope_Rep6 977.54334812229 977.54224993586 95.332 2 0.09589900306269636 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 71322 18830 MHFLENISL True PC9_epitope_Rep6 1102.5481162329 1102.5470099358602 85.073 2 0.09588994753899843 0.002755681818181818 0.9438714419765777 ['ENST00000356142.4_1_7:6426883-6431586:+|nuORF'] 5604 10022 APAAATVAV True PC9_epitope_Rep2 769.4334037504899 769.43230993586 43.875 2 0.09588992177913368 0.002755681818181818 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 1086 4945 AEAPASPAP True H1975_Epitope_Rep3 809.3919328613299 809.39082993586 24.149 2 0.09588652741816592 0.002755681818181818 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 70288 14605 LYPEGLAQL True NCI_RA007_Epitope_Rep3 1002.5385970950199 1002.53750993586 64.791 2 0.09588325236488317 0.002755681818181818 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 88981 2754 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 14.677 2 0.09588311889368491 0.002755681818181818 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 89795 6054 RFEEKHAYF True NCI_RA007_Epitope_Rep4 1225.5880068989297 1225.58635490379 29.903 3 0.09587810551926304 0.002755681818181818 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 25232 15357 FEDDAIQLV True H1975_Epitope_Rep1 1048.50769088956 1048.50717496793 64.34 1 0.09587650167731893 0.002755681818181818 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 5045 22049 ALLGGLVNV True PC9_epitope_Rep5 854.52255310806 854.52200496793 89.839 1 0.09587573440117343 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-3|PAQR4'] 95082 12495 RYSSMAASF True PC9_epitope_Rep5 1018.4542158480599 1018.45310993586 53.06 2 0.09587445852273481 0.002755681818181818 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 11786 6420 DHINGRVL True PC9_epitope_Rep5 922.49846361854 922.49736993586 29.671 2 0.09586803759466671 0.002755681818181818 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 139463 9170 YTFPNGAKY True H1975_Epitope_Rep2 1059.5025459394699 1059.5014499358601 40.225 2 0.09586582742713673 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000188010|Q502X0|MORN2', 'ENSG00000188010|ENST00000644631|MORN2'] 4097 9717 AHSPLAAQL True PC9_epitope_Rep4 906.4923156089401 906.49120993586 45.014 2 0.0958627441094803 0.002755681818181818 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 95998 9052 SEAFSVASA True H1975_Epitope_Rep1 867.3974121645899 867.39686496793 39.727 1 0.09585716140484071 0.002755681818181818 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 17887 4827 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 23.657 3 0.09584999434430783 0.002755681818181818 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 21571 12302 ERSGIPIVT True PC9_epitope_Rep1 970.5447451046199 970.54364993586 52.175 2 0.09584761271170016 0.002755681818181818 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3'] 86365 10202 QQLGKVVQV True PC9_epitope_Rep3 997.5920296502098 997.59092993586 44.193 2 0.09584080767443377 0.002755681818181818 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 76451 5933 NTAQGFRTV True PC9_epitope_Rep2 992.5039429218 992.50284993586 28.211 2 0.09584042774458605 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 87063 7125 QSEEAVAAY True H1975_Epitope_Rep2 966.4294405688597 966.4288949679301 32.34 1 0.09584039839601573 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 110459 15375 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.53308993586 64.149 2 0.09584018050486129 0.002755681818181818 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 84574 16462 QHDFTSQIF True PC9_epitope_Rep4 1121.51417325233 1121.5130699358601 71.29 2 0.09583483984961087 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 132940 23319 VYTVVDEMFL True PC9_epitope_Rep1 1214.5893123385397 1214.58877496793 94.487 1 0.0958239356573292 0.002755681818181818 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 31770 11032 GELLFVHSA True NCI_RA007_Epitope_Rep4 971.50763131991 971.50652993586 49.307 2 0.09582018093462381 0.002755681818181818 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 71158 4162 M[Oxidation]EVKPSSVTA True H1975_Epitope_Rep2 1063.52196143515 1063.5208699358602 21.11 2 0.09581480971652245 0.002755681818181818 0.9438714419765777 ['BTG3|p.P193Afs*29|1|0.14|ENSG00000154640|chr21:17594276-17594277|-/T|frameshift_variant', 'ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 125056 14343 VLPGHFNTF True PC9_epitope_Rep6 1030.5236157372199 1030.5225099358602 67.067 2 0.09581114376394599 0.002755681818181818 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 108545 14306 TEGEPPFLP True H1975_Epitope_Rep3 985.4756624852898 985.47511496793 60.374 1 0.095810943569009 0.002755681818181818 0.9438714419765777 ['ENSG00000241058|ENST00000377304|NSUN6'] 98391 23009 SIIDEFLHI True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 93.998 2 0.09580812589469208 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 67521 15545 LTELPPLDDY True H1975_Epitope_Rep2 1174.57577044938 1174.57517496793 64.949 1 0.09580630020123711 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 8188 7774 ATGENLPRV True PC9_epitope_Rep6 955.5086939490699 955.50758993586 39.271 2 0.09580416139131084 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 27777 8951 FQEETGVRV True PC9_epitope_Rep4 1063.52982331647 1063.5287299358602 41.974 2 0.09580030090808085 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 127526 13479 VQVGETFKV True PC9_epitope_Rep2 1005.5494961318899 1005.54838993586 57.132 2 0.09579768042309947 0.002755681818181818 0.9438714419765777 ['ENSG00000141646|ENST00000342988|SMAD4', 'SMAD4|p.D415Efs*20|1|0.15|ENSG00000141646|chr18:51067121-51067124|AGAC/-|frameshift_variant'] 97797 14429 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 60.324 2 0.09579152120396074 0.002755681818181818 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 47082 14575 IVVGRITEV True PC9_epitope_Rep3 984.5967806774798 984.59568993586 61.189 2 0.09579020243520207 0.002755681818181818 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 93713 6250 RTNSTFNQV True PC9_epitope_Rep5 1065.5203212619301 1065.51922993586 29.019 2 0.09578987619971559 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 5807 19047 APFLASAVSA True PC9_epitope_Rep2 932.4967322830399 932.49562993586 78.629 2 0.09578570623282359 0.002755681818181818 0.9438714419765777 ['ENSG00000146242|ENST00000369750|TPBG', 'TPBG|p.L117Sfs*56|1|0.45|ENSG00000146242|chr6:82365309-82365327|GCTGGCGGAGCTGGCCGCG/-|frameshift_variant'] 17210 15976 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50708496793 66.598 1 0.09578481541886825 0.002755681818181818 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 138967 11638 YSESSQLLY True H1975_Epitope_Rep1 1088.50260550912 1088.50207496793 49.757 1 0.09578310160442928 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 87423 12422 QTEDNM[Oxidation]LFY True H1975_Epitope_Rep2 1175.4804905459898 1175.4793899358601 52.867 2 0.09578146802016495 0.002755681818181818 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 21084 8905 ERDPATYNI True PC9_epitope_Rep4 1077.5090878718902 1077.50798993586 41.79 2 0.09577960499492566 0.002755681818181818 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 125963 10271 VPAGGAVAV True PC9_epitope_Rep3 739.42283906679 739.42229496793 44.456 1 0.09577880735003716 0.002755681818181818 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 138103 19863 YQGSSFVL True PC9_epitope_Rep1 899.4388830537499 899.43833496793 81.22 1 0.0957708271469265 0.002755681818181818 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 69971 22445 LYEQAFQLL True PC9_epitope_Rep2 1123.5913609438699 1123.59026993586 91.823 2 0.09576995949563319 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 52339 11587 KPFGQVIST True PC9_epitope_Rep1 975.5389314481899 975.53782993586 49.446 2 0.09576631428846938 0.002755681818181818 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 43729 5511 IISSIEQK True NCI_RA007_Epitope_Rep2 916.5229470308799 916.52184993586 26.051 2 0.09576408797237394 0.002755681818181818 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 26132 14554 FHGPPEPVL True PC9_epitope_Rep2 991.5127167003499 991.51160993586 61.253 2 0.09575331733348315 0.002755681818181818 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B'] 98886 13245 SIWDETLYK True NCI_RA007_Epitope_Rep5 1153.5655401188499 1153.56444993586 57.627 2 0.09574479600685046 0.002755681818181818 0.9438714419765777 ['ENSG00000155876|ENST00000380527|RRAGA', 'ENSG00000083750|ENST00000374941|RRAGB', 'nc|ENSG00000083750|Q5VZM2|RRAGB', 'ENST00000474757.1_1_X:55757854-55777647:+|nuORF'] 27839 18535 FQLEHIM[Oxidation]DL True PC9_epitope_Rep4 1160.5535959166 1160.5524899358602 79.369 2 0.09573830551801735 0.002755681818181818 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 29002 19695 FTIGEAITSA True PC9_epitope_Rep4 1008.5127762699999 1008.51166993586 83.878 2 0.09573744366782015 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 25598 10604 FETAVAPNV True H1975_Epitope_Rep2 946.4759968384599 946.47544496793 45.812 1 0.09572762726247153 0.002755681818181818 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 130878 4478 VVGVGMTK True NCI_RA007_Epitope_Rep5 789.44186025921 789.44076993586 23.875 2 0.09572507347680023 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 14792 12053 DYAEVSNTF True NCI_RA007_Epitope_Rep3 1044.44000525256 1044.43890993586 54.532 2 0.0957245345452598 0.002755681818181818 0.9438714419765777 ['ENSG00000186141|ENST00000334163|POLR3C'] 106670 17470 SYAELGTTI True PC9_epitope_Rep4 953.47057710485 953.46948993586 75.196 2 0.09572255704615121 0.002755681818181818 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 2512 6879 AEQRIGPLA True H1975_Epitope_Rep2 953.5294293936498 953.52832993586 31.38 2 0.09572207135626813 0.002755681818181818 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 27755 19434 FQDSVFNDL True PC9_epitope_Rep6 1083.48728979815 1083.48618993586 87.412 2 0.09570939312417828 0.002755681818181818 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 115814 8597 TVM[Oxidation]DSKIVQV True PC9_epitope_Rep6 1134.59546072858 1134.5943699358602 42.876 2 0.09570006627018275 0.002755681818181818 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 45329 8090 ISDAPAPAY True H1975_Epitope_Rep2 903.43379767331 903.43324496793 36.065 1 0.09569818711731705 0.002755681818181818 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 72064 18726 MRASSFLIV True PC9_epitope_Rep4 1022.5582869937799 1022.55718993586 80.111 2 0.09569056306816086 0.002755681818181818 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 67252 12985 LTDLVPNTEY True H1975_Epitope_Rep2 1163.57101942211 1163.56992993586 55.064 2 0.09566836658760697 0.002755681818181818 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 98404 21611 SIIGRLLEV True PC9_epitope_Rep3 998.6124307416198 998.61132993586 88.423 2 0.09566802248667021 0.002755681818181818 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 55441 10461 LATRSFPQL True H1975_Epitope_Rep2 1031.5763795860698 1031.5752899358602 45.254 2 0.09566689202704347 0.002755681818181818 0.9438714419765777 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 11747 13563 DHHENKYLLL True PC9_epitope_Rep5 1280.65133543148 1280.6502299358601 57.192 2 0.09566292991291096 0.002755681818181818 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 107921 8249 TAVTVNQSL True NCI_RA007_Epitope_Rep3 931.4974605590301 931.49636993586 39.579 2 0.09563759479119485 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 24710 14055 FAVIGRSSL True PC9_epitope_Rep4 948.53926580136 948.53816993586 61.972 2 0.09563634892736056 0.002755681818181818 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'ENST00000502426.5_1_17:48755439-48768558:+|nuORF'] 9796 13153 AYLHTTTTF True PC9_epitope_Rep1 1053.51311062317 1053.51257496793 55.458 1 0.09563013182842046 0.002755681818181818 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 90451 17109 RISGETIFVTA True PC9_epitope_Rep1 1192.64518742188 1192.6440899358602 70.636 2 0.09562595600781243 0.002755681818181818 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 72242 14252 MRYVASYL True PC9_epitope_Rep6 1001.5004377644898 1001.49934993586 66.711 2 0.09562571005451309 0.002755681818181818 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 137473 22016 YLPELLQTV True PC9_epitope_Rep2 1074.5961119711399 1074.59557496793 90.156 1 0.0956225258613972 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 86591 19428 QRDFNMIDL True PC9_epitope_Rep2 1150.54409348162 1150.54298993586 80.107 2 0.095613685214655 0.002755681818181818 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 26157 9578 FHNTEVEAM True PC9_epitope_Rep1 1076.45969515132 1076.4585899358601 41.699 2 0.09559189499336916 0.002755681818181818 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 36478 11901 GVISKVSTL True PC9_epitope_Rep2 902.5436824754601 902.54258993586 51.101 2 0.09559179489859108 0.002755681818181818 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 25300 4715 FEEGVGKPA True H1975_Epitope_Rep3 932.4603467743198 932.45924993586 23.262 2 0.09558635719487389 0.002755681818181818 0.9438714419765777 ['ENSG00000116903|ENST00000366645|EXOC8'] 2471 6326 AEQPPHLTP True H1975_Epitope_Rep3 988.4977949122 988.4972449679301 29.326 1 0.0955790484175295 0.002755681818181818 0.9438714419765777 ['ENSG00000146733|ENST00000275605|PSPH'] 75581 17544 NQPGVLIQV True PC9_epitope_Rep6 966.5498304850599 966.54872993586 80.123 2 0.09557784505838697 0.002755681818181818 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 27282 24458 FLYPFPLAL True PC9_epitope_Rep1 1079.60555445603 1079.60497496793 98.92 1 0.09556412057692872 0.002755681818181818 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 98010 8401 SHSSFQASL True PC9_epitope_Rep4 962.44575933934 962.44466993586 39.777 2 0.09555813693047707 0.002755681818181818 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214'] 101596 9656 SPFAEGTSA True PC9_epitope_Rep1 865.38176210045 865.3806699358599 41.998 2 0.09555621193383657 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 118166 15758 VAVPLYDTL True NCI_RA007_Epitope_Rep5 989.54334812229 989.54224993586 67.332 2 0.09555346736138104 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 99114 20557 SLAGGIIGV True PC9_epitope_Rep3 785.46470387877 785.4641549679301 84.336 1 0.09554862439835761 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 25345 11892 FEGGVVIAA True H1975_Epitope_Rep1 861.4596184983299 861.4590749679301 50.743 1 0.09554215158962956 0.002755681818181818 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 138351 10678 YRDEADVL True PC9_epitope_Rep1 979.4610750503098 979.45996993586 45.963 2 0.09554035072772916 0.002755681818181818 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 104194 15868 SSDGAISLLTY True H1975_Epitope_Rep1 1125.55536935797 1125.55426993586 66.345 2 0.09552987764547353 0.002755681818181818 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 139326 5409 YTDRALRASY True H1975_Epitope_Rep3 1214.6043852390599 1214.6027249037902 25.868 3 0.09552899927236803 0.002755681818181818 0.9438714419765777 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF', 'ENSG00000100056|ENST00000252137|ESS2', 'ENST00000434568.5_1_22:19121711-19126708:-|nuORF'] 140443 13599 YYFPVKNVI True NCI_RA007_Epitope_Rep4 1141.6171817688898 1141.6160899358601 59.518 2 0.09552324970496057 0.002755681818181818 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 52342 10686 KPFGQVIST True PC9_epitope_Rep2 975.5389314481899 975.53782993586 46.416 2 0.09551767921790832 0.002755681818181818 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 81788 21218 PSESLILFL True PC9_epitope_Rep6 1017.5746482505699 1017.57354993586 94.462 2 0.09551710298148013 0.002755681818181818 0.9438714419765777 ['ENST00000293778.10_2_17:4636851-4637124:-|nuORF'] 17738 17582 EHSTVITFL True PC9_epitope_Rep6 1045.54441075145 1045.5433099358602 80.268 2 0.09551144029303496 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 137995 19998 YQAPDIDVQL True PC9_epitope_Rep4 1160.57135377528 1160.57077496793 85.055 1 0.09550835903318755 0.002755681818181818 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 1185 7947 AEDDLNTVAA True H1975_Epitope_Rep1 1017.46146897313 1017.4608749679301 35.517 1 0.09550673549651156 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 26064 10527 FHDPDSAVV True PC9_epitope_Rep5 985.4505103666099 985.44940993586 45.48 2 0.09550224111032299 0.002755681818181818 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 87345 5497 QTDCAPNNGY True H1975_Epitope_Rep2 1081.4134732348898 1081.4123699358602 26.157 2 0.09550198216253494 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 115209 8072 TVAVPLVGK True NCI_RA007_Epitope_Rep3 882.5538532363399 882.55274993586 38.843 2 0.09549142856780544 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 139400 8936 YTEEDAVSY True H1975_Epitope_Rep1 1075.43458551895 1075.43348993586 39.279 2 0.09548382794424487 0.002755681818181818 0.9438714419765777 ['ENSG00000188191|ENST00000537384|PRKAR1B'] 10979 4932 DC[Carbamidomethyl]VGPEVEK True NCI_RA007_Epitope_Rep2 1031.4593610775798 1031.45826993586 23.805 2 0.09548122451244526 0.002755681818181818 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 115238 10602 TVDDEAPAV True PC9_epitope_Rep5 915.41854153199 915.41744993586 45.768 2 0.09548043184896493 0.002755681818181818 0.9438714419765777 ['ENST00000562816.5_1_16:89383456-89484700:-|nuORF', 'ENST00000378330.6_1_16:89383456-89484700:-|nuORF', 'ENST00000330736.9_1_16:89383456-89383540:-|nuORF'] 3251 5193 AGFAGDDAPR True PC9_epitope_Rep4 975.4410083120698 975.43990993586 26.677 2 0.09547798612631413 0.002755681818181818 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 97018 9354 SEVQYIQEA True H1975_Epitope_Rep3 1065.4978544818498 1065.49727496793 40.98 1 0.09547688256349333 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 22386 6813 ETERRMDFY True H1975_Epitope_Rep3 1245.54482175761 1245.54372993586 31.16 2 0.09547303615769584 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 87541 20112 QTIQDIVTV True PC9_epitope_Rep5 1015.5549754351499 1015.5544749679301 82.408 1 0.09546350712623528 0.002755681818181818 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF'] 104676 4795 STAGFVTGK True NCI_RA007_Epitope_Rep4 866.4497820906199 866.44868993586 24.881 2 0.09545811736855486 0.002755681818181818 0.9438714419765777 ['ENST00000471951.6_2_20:45927519-45927630:-|nuORF'] 114931 21696 TTFEDFVAI True PC9_epitope_Rep4 1041.5018772331298 1041.5007899358602 91.656 2 0.09545650458549555 0.002755681818181818 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A'] 20974 20640 ERADLIAYL True PC9_epitope_Rep5 1062.57095985246 1062.5698699358602 84.445 2 0.09544810584444297 0.002755681818181818 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 100440 11533 SLPEELQKC True PC9_epitope_Rep4 1045.51139637101 1045.51028993586 52.124 2 0.09544183650535165 0.002755681818181818 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 83094 21851 PYNDYFEYF True PC9_epitope_Rep4 1256.50260550912 1256.50207496793 92.252 1 0.09543342823139649 0.002755681818181818 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 14970 19850 DYSDIVTTL True PC9_epitope_Rep6 1025.49170647225 1025.4906099358602 89.013 2 0.09541808229928804 0.002755681818181818 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF', 'RAD21-EIF3H|4|fusion'] 96944 15045 SEVEIAWPA True H1975_Epitope_Rep2 1000.4865615221598 1000.48597496793 63.021 1 0.09540731188933795 0.002755681818181818 0.9438714419765777 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 138686 14778 YRTEFTTAL True PC9_epitope_Rep2 1100.55022440788 1100.54912993586 62.107 2 0.09540356050150016 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 105200 8054 STPLAGLAPK True NCI_RA007_Epitope_Rep3 953.55458151233 953.55348993586 38.766 2 0.09540162839846879 0.002755681818181818 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 6478 6186 APTGDLPRA True PC9_epitope_Rep2 896.4715801643599 896.47048993586 29.184 2 0.09538991446373478 0.002755681818181818 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 47836 8744 IYSTKLYRF True NCI_RA007_Epitope_Rep3 1189.6495445263297 1189.64788490379 41.483 3 0.09538886427059601 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENSG00000148925|ENST00000278174|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 116846 19275 TYMKDLYQL True PC9_epitope_Rep5 1173.5739966275698 1173.57288993586 79.184 2 0.0953877595925382 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 53859 17804 KYGSVIQLL True PC9_epitope_Rep6 1019.60153170475 1019.60042993586 81.116 2 0.0953857031552553 0.002755681818181818 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3', 'ITPR3|p.D181Tfs*3|1|0.61|ENSG00000096433|chr6:33659029-33659029|G/-|frameshift_variant'] 113925 20613 TRIGVMSLI True PC9_epitope_Rep3 988.5739370579199 988.57282993586 84.557 2 0.09538538784526387 0.002755681818181818 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 43276 17525 IHDGMNLEL True PC9_epitope_Rep3 1040.49608066004 1040.49498993586 72.593 2 0.0953736698891296 0.002755681818181818 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 49411 17453 KILPTLEAV True PC9_epitope_Rep2 982.60628273202 982.60518993586 72.385 2 0.09536764850396576 0.002755681818181818 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 22094 19610 ESVAILPQL True PC9_epitope_Rep4 968.55424715916 968.55314993586 83.553 2 0.09536095686124098 0.002755681818181818 0.9438714419765777 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 91866 8604 RPNPPPVSV True PC9_epitope_Rep5 961.53451477409 961.53340993586 38.039 2 0.09535501735137576 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 114213 10621 TRVNPVTL True PC9_epitope_Rep1 898.5236157372199 898.52250993586 45.747 2 0.09535420829954007 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000278259|Q96H55-4|MYO19', 'ENSG00000278259|ENST00000614623|MYO19', 'nc|ENSG00000278259|Q96H55-2|MYO19', 'nc|ENSG00000278259|Q96H55-3|MYO19'] 105470 6126 SVASPFTSK True NCI_RA007_Epitope_Rep3 922.4759968384601 922.47488993586 31.084 2 0.09534215117329545 0.002755681818181818 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4', 'ENSG00000187527|ENST00000342358|ATP13A5'] 119159 16741 VEITPESILSA True H1975_Epitope_Rep2 1157.61796961453 1157.6168699358602 69.629 2 0.09533389741199445 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 26469 18757 FIPPDGNFRL True PC9_epitope_Rep4 1174.61349337078 1174.6123899358602 80.231 2 0.09533205615459334 0.002755681818181818 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 103142 20743 SQMPTVIYV True PC9_epitope_Rep3 1036.5263181591597 1036.5252299358601 85.056 2 0.09533137870805593 0.002755681818181818 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 38852 13819 HIGDAVVI True PC9_epitope_Rep5 822.4599528515 822.45884993586 58.173 2 0.095329134737553 0.002755681818181818 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 26811 13000 FLEENNLDY True H1975_Epitope_Rep2 1155.5084191655499 1155.50732993586 55.121 2 0.09530615222622714 0.002755681818181818 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000527623.1_1_19:46891683-46893600:+|nuORF', 'ENST00000487483.6_1_19:46891669-46893605:+|nuORF'] 86935 4543 QRSGNVAEL True PC9_epitope_Rep6 972.4988575413598 972.49776993586 24.729 2 0.09530169395432782 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 102330 5240 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 26.856 2 0.09528969892198925 0.002755681818181818 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 47785 5841 IYQRHVYNL True NCI_RA007_Epitope_Rep3 1204.6352914445197 1204.6336349037902 29.956 3 0.09528704771169406 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 36426 21889 GVIGGGVFQAI True PC9_epitope_Rep1 1016.5654805491998 1016.56438993586 89.01 2 0.09528572636426144 0.002755681818181818 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 73361 7931 NEQEGVPSV True H1975_Epitope_Rep2 957.4403396057298 957.4397949679301 35.452 1 0.09527929751595864 0.002755681818181818 0.9438714419765777 ['ENSG00000113194|ENST00000261942|FAF2'] 21380 6921 ERMAGNEAL True PC9_epitope_Rep5 989.4600295044899 989.4589299358599 31.592 2 0.09527920522912009 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000148426|Q86WR7-2|PROSER2', 'ENSG00000148426|ENST00000277570|PROSER2'] 1946 12150 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47456993586 51.82 2 0.09526859655150954 0.002755681818181818 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 95285 19777 SADTTILFV True PC9_epitope_Rep6 965.50696261357 965.50586993586 88.73 2 0.09526144540859403 0.002755681818181818 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 31415 19081 GEDFLSWNDL True H1975_Epitope_Rep3 1194.51931820242 1194.51822993586 80.013 2 0.09526017383058917 0.002755681818181818 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.R772Pfs*13|1|0.15|ENSG00000183856|chr1:156544452-156544462|CCTATAACCCC/-|frameshift_variant'] 88889 5916 REAPASVVP True H1975_Epitope_Rep3 924.5028802926399 924.50178993586 27.765 2 0.09525589635164608 0.002755681818181818 0.9438714419765777 ['ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'nc|ENSG00000168883|Q53GS9-3|USP39', 'USP39|p.H155Qfs*5|1|0.1|ENSG00000168883|chr2:85623675-85623676|CA/-|frameshift_variant', 'ENST00000455732.5_1_2:85843288-85850811:+|nuORF'] 107373 20316 SYSMIVNNL True PC9_epitope_Rep2 1039.50083168731 1039.4997299358602 83.569 2 0.09525508181848266 0.002755681818181818 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 2391 11647 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.5067449679301 49.87 1 0.09525479858745783 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 93651 10083 RTFEKIEEV True PC9_epitope_Rep1 1149.60298825673 1149.60133490379 43.654 3 0.09525065843432823 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 87104 6102 QSEVESTEY True H1975_Epitope_Rep2 1070.44039917538 1070.4398749679299 28.448 1 0.09525048992984958 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 95708 8579 SAYQHPASF True PC9_epitope_Rep1 1006.4508447197799 1006.44974993586 37.836 2 0.09525023350617493 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 29733 22231 FVPQFISQL True PC9_epitope_Rep2 1077.5858816406098 1077.58478993586 90.989 2 0.09523977785883773 0.002755681818181818 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 24344 21339 FADPDDLPGL True PC9_epitope_Rep5 1058.49204082542 1058.49094993586 87.139 2 0.09523277666758376 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC', 'NRDC|p.M396Kfs*40|1|0.13|ENSG00000078618|chr1:51825340-51825341|-/TT|frameshift_variant'] 2217 7666 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.43850993586 34.439 2 0.09522693006605702 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 13897 15300 DRDPEFYKF True PC9_epitope_Rep1 1215.5560380643099 1215.5549499358601 63.672 2 0.09522548584539202 0.002755681818181818 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 39831 11911 HQGATPLVL True PC9_epitope_Rep2 934.5236157372199 934.52250993586 51.14 2 0.09521379795938409 0.002755681818181818 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 38086 14229 HENILGFIA True H1975_Epitope_Rep3 1012.5341804209199 1012.53308993586 60.073 2 0.09520598457282438 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant'] 47441 11437 IYIKQIKTF True PC9_epitope_Rep6 1152.6906810623198 1152.68958993586 55.055 2 0.09519769494611918 0.002755681818181818 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 28796 12814 FTDEEVDEMY True H1975_Epitope_Rep1 1276.4805497352 1276.4794499358602 54.353 2 0.09519299684546048 0.002755681818181818 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9'] 127491 19182 VQTPVMTVV True PC9_epitope_Rep5 972.5314035396 972.53030993586 78.82 2 0.09519148270710152 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 103249 17126 SQSSVVYEI True PC9_epitope_Rep2 1010.4920408254198 1010.49094993586 71.123 2 0.0951865410207909 0.002755681818181818 0.9438714419765777 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 137790 9728 YPAQTYTA True PC9_epitope_Rep1 913.4181476091699 913.41704993586 42.276 2 0.095185060256334 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'ENST00000481203.1_1_3:100463567-100467372:+|nuORF'] 69649 10546 LVVSTQTALA True H1975_Epitope_Rep1 1001.5757108797299 1001.57517496793 45.519 1 0.09518223777192653 0.002755681818181818 0.9438714419765777 ['CON__P02769'] 22260 5094 ETDRGMSAEY True H1975_Epitope_Rep1 1157.46590273057 1157.46480993586 24.665 2 0.09518026462434848 0.002755681818181818 0.9438714419765777 ['ENSG00000100347|ENST00000350028|SAMM50'] 68623 20473 LVAEDIPLLFS True H1975_Epitope_Rep1 1215.6750905678298 1215.6739899358602 85.149 2 0.09518003380677652 0.002755681818181818 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 61982 14914 LLLPGELAK True PC9_epitope_Rep6 952.5957180483199 952.59462993586 69.361 2 0.09517850061876473 0.002755681818181818 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 27695 8057 FQDGTKATF True PC9_epitope_Rep4 1013.4818104948899 1013.48070993586 38.443 2 0.09517599749589997 0.002755681818181818 0.9438714419765777 ['ENSG00000110711|ENST00000279146|AIP'] 140661 19530 YYPNPPLVL True PC9_epitope_Rep6 1074.57498260374 1074.57388993586 87.785 2 0.09517406267445166 0.002755681818181818 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 95614 13804 SATQVYTIL True H1975_Epitope_Rep3 994.53351171458 994.53240993586 58.402 2 0.09516672129232548 0.002755681818181818 0.9438714419765777 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000481241.1_1_3:180491477-180491675:-|nuORF'] 31887 5994 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 28.069 2 0.09516309084599571 0.002755681818181818 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 102668 4431 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44466993586 21.928 2 0.09515929708030384 0.002755681818181818 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 84602 4713 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 23.498 2 0.09514162313180947 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 42421 12133 IEQEFLTEA True H1975_Epitope_Rep3 1078.51825557326 1078.51714993586 51.838 2 0.09513684776799688 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B', 'ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 2287 6536 AEPSRGPPLP True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 30.052 2 0.09513504880198718 0.002755681818181818 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 18747 8758 ELDPDNETY True H1975_Epitope_Rep3 1094.44039917538 1094.4398749679299 38.693 1 0.09513320260025555 0.002755681818181818 0.9438714419765777 ['ENSG00000104969|ENST00000221566|SGTA'] 6686 14817 AQAPGVITGV True PC9_epitope_Rep2 911.5076313199099 911.50652993586 62.257 2 0.09513080067147416 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 72545 21159 MVGEGFIEV True PC9_epitope_Rep2 979.4684689298699 979.46792496793 86.841 1 0.09512854367585548 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 140739 12629 YYQNYFEKL True NCI_RA007_Epitope_Rep5 1266.5920892198599 1266.59098993586 55.23 2 0.095126630646748 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 27787 21911 FQEGDIILV True PC9_epitope_Rep1 1032.5491617787197 1032.5480699358602 89.096 2 0.09512343903908958 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 21770 12226 ESDFDDEAYY True H1975_Epitope_Rep2 1252.4407930982 1252.43968993586 52.111 2 0.0951217714339099 0.002755681818181818 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 64571 10916 LRDQGGVVL True PC9_epitope_Rep5 955.5450794577898 955.5439899358599 46.978 2 0.09512133030347279 0.002755681818181818 0.9438714419765777 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.R664W|1|0.6|ENSG00000100425|chr22:49797913-49797913|T/A|missense_variant'] 75485 18945 NQINGSFAL True PC9_epitope_Rep2 962.48214484806 962.48104993586 78.237 2 0.09511141493723074 0.002755681818181818 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 75847 10220 NRDLATPVM True PC9_epitope_Rep4 1015.51206507735 1015.51096993586 46.989 2 0.09510081509665629 0.002755681818181818 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 83195 14954 PYYSKFILI True NCI_RA007_Epitope_Rep3 1142.6375828603 1142.63648993586 66.259 2 0.09509872477065813 0.002755681818181818 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5'] 118899 4806 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 23.575 2 0.09509013032836919 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 36471 16953 GVISKTFQL True PC9_epitope_Rep2 991.57023157647 991.56912993586 70.454 2 0.09508521654754976 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 31862 4805 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep2 977.4124109861698 977.41130993586 23.571 2 0.0950787894767459 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 9069 15305 AVIVWSFMK True NCI_RA007_Epitope_Rep5 1079.58377346563 1079.5826699358602 65.567 2 0.0950719792877004 0.002755681818181818 0.9438714419765777 ['ENST00000514133.1_1_4:52895917-52895998:-|nuORF'] 73615 19784 NGFPVFATV True PC9_epitope_Rep6 950.48616759934 950.48506993586 88.755 2 0.09506610245057019 0.002755681818181818 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 44148 23067 ILPPQLALF True PC9_epitope_Rep2 1010.6164534928998 1010.61534993586 94.22 2 0.09506387046016686 0.002755681818181818 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 113406 21657 TQLNMFQTL True PC9_epitope_Rep1 1094.54303085246 1094.54247496793 88.133 1 0.09505982027041031 0.002755681818181818 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 106769 17034 SYFSGSHMF True PC9_epitope_Rep2 1061.4276667470501 1061.42656993586 70.771 2 0.09505351822277126 0.002755681818181818 0.9438714419765777 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 66816 21397 LSVPGLVSV True PC9_epitope_Rep5 869.52221875489 869.52112993586 87.365 2 0.09505159212704566 0.002755681818181818 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 118342 7498 VDFNVPM[Oxidation]K True H1975_Epitope_Rep1 964.4688036634799 964.46770993586 33.839 2 0.09504661397907835 0.002755681818181818 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 78167 6786 PAPPPPPPP True NCI_RA007_Epitope_Rep1 865.46978925921 865.46868993586 30.403 2 0.09504533512474349 0.002755681818181818 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 104570 4971 SSSPPILTK True NCI_RA007_Epitope_Rep3 928.52294703088 928.52184993586 26.549 2 0.09504216600872971 0.002755681818181818 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A'] 97724 12561 SHFEGLITT True PC9_epitope_Rep6 1003.49746055903 1003.49636993586 59.758 2 0.09503544923772571 0.0027832211524807587 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 48531 11768 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 51.923 2 0.09503332605952627 0.0027832211524807587 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 83804 9037 QEEPDLVSA True H1975_Epitope_Rep2 986.4556553166999 986.45454993586 39.714 2 0.09502308380814059 0.0027832211524807587 0.9438714419765777 ['ENSG00000143643|ENST00000366661|TTC13'] 107355 16703 SYSDPPLKF True PC9_epitope_Rep3 1052.51786165044 1052.51676993586 69.381 2 0.09502215761300162 0.0027832211524807587 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 1215 6871 AEDEPPAPP True H1975_Epitope_Rep3 921.4079768482899 921.40686993586 31.388 2 0.0950213972507476 0.0027832211524807587 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 71361 13948 MHYSPDASTAF True PC9_epitope_Rep5 1225.5073736197298 1225.50626993586 58.673 2 0.09502084251017671 0.0027832211524807587 0.9438714419765777 ['ENSG00000198727|ENST00000361789|MT-CYB'] 40348 5884 HRTDSEIAL True PC9_epitope_Rep4 1040.5250722892 1040.5239699358601 29.53 2 0.09500098261708279 0.0027832211524807587 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 53532 17787 KVPEWVDTV True PC9_epitope_Rep3 1071.5600608155898 1071.5589699358602 73.619 2 0.0949992787550158 0.0027832211524807587 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 73284 5423 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.5074749679301 25.918 1 0.0949973935742021 0.0027832211524807587 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 102013 3083 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 15.875 2 0.09499608417857328 0.0027832211524807587 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 76532 9198 NTDNNLAVY True H1975_Epitope_Rep2 1022.4668887067398 1022.46637496793 40.334 1 0.09499414655717682 0.0027832211524807587 0.9438714419765777 ['ENSG00000204019|ENST00000371894|CT83', 'CT83|p.D61Y|1|0.75|ENSG00000204019|chrX:116461902-116461902|C/A|missense_variant'] 671 5784 AAVADPHSL True NCI_RA007_Epitope_Rep4 879.4450310633501 879.44392993586 28.87 2 0.09498922474805531 0.0028084309664974045 0.9438714419765777 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000594962.5_1_19:17611587-17615418:+|nuORF', 'nc|ENSG00000130304|Q6PCB7-2|SLC27A1'] 5949 11420 APILVPHTA True PC9_epitope_Rep3 917.5334521449299 917.53234993586 48.927 2 0.09498796131151215 0.0028084309664974045 0.9438714419765777 ['ENSG00000223501|ENST00000445902|VPS52', 'nc|ENSG00000223501|Q8N1B4-2|VPS52'] 102413 16178 SPVVPQISA True PC9_epitope_Rep3 896.4967322830399 896.49562993586 67.367 2 0.09496969001013339 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 1112 6426 AEAPPPKIP True H1975_Epitope_Rep3 918.51746772762 918.51636993586 29.694 2 0.09496565360305698 0.0028084309664974045 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 54852 11850 LAGDGVGAVNI True H1975_Epitope_Rep3 984.52400966004 984.5234649679301 50.729 1 0.09495961296953065 0.0028084309664974045 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 62147 7361 LLPEYGGTK True NCI_RA007_Epitope_Rep1 976.5229470308799 976.52184993586 32.628 2 0.09495717153283467 0.0028084309664974045 0.9438714419765777 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF', 'ENST00000465573.1_1_2:198365552-198367980:+|nuORF', 'ENST00000550617.1_1_12:102267096-102267252:-|nuORF'] 138981 10133 YSEVYPGQQY True H1975_Epitope_Rep2 1232.5349682665599 1232.53437496793 43.975 1 0.09495689793883892 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 29609 18583 FVLGHFILL True H1975_Epitope_Rep1 1057.63243791021 1057.63134993586 77.484 2 0.09495083825459881 0.0028084309664974045 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 38739 5862 HHTTQQTFL True PC9_epitope_Rep2 1111.54105670651 1111.53994993586 27.945 2 0.09494740602042996 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 5946 9279 APIIDVVR True H1975_Epitope_Rep3 881.53345214493 881.53234993586 40.686 2 0.09494059695626691 0.0028084309664974045 0.9438714419765777 ['ENSG00000166441|ENST00000314138|RPL27A'] 91958 5780 RPPPPPPPP True PC9_epitope_Rep1 950.5337864980999 950.53268993586 27.049 2 0.09493959125615765 0.0028084309664974045 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 27100 20437 FLQEGDLISA True PC9_epitope_Rep2 1091.54989005471 1091.54937496793 84.038 1 0.09493673208938389 0.0028084309664974045 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 706 9764 AAVGSVATL True H1975_Epitope_Rep3 787.44396843419 787.44341496793 42.58 1 0.09492903095533486 0.0028084309664974045 0.9438714419765777 ['ALKBH1|p.A252Pfs*25|1|0.19|ENSG00000100601|chr14:77674229-77674229|G/-|frameshift_variant', 'ENSG00000100601|ENST00000216489|ALKBH1'] 101517 9706 SPAGPILSIR True H1975_Epitope_Rep3 1009.59202965021 1009.59092993586 42.356 2 0.09491678225402746 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 72501 15672 MVAPAVASV True PC9_epitope_Rep5 843.4524249429099 843.45132993586 65.294 2 0.0949082702406368 0.0028084309664974045 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 66838 16159 LSVTELDRV True PC9_epitope_Rep2 1030.56587447202 1030.56476993586 67.41 2 0.09490573314456069 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 34912 4885 GQVVTKTAL True NCI_RA007_Epitope_Rep3 915.5389314481899 915.53782993586 26.201 2 0.09490330702677123 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 90869 3507 RKYSNEDTL True NCI_RA007_Epitope_Rep4 1124.5462016566 1124.5451099358602 19.467 2 0.09489720468780748 0.0028084309664974045 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 86719 12261 QRISETTML True PC9_epitope_Rep3 1077.54884450889 1077.54774993586 52.19 2 0.09489212219524575 0.0028084309664974045 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 2057 9890 AELGEAPVP True H1975_Epitope_Rep1 881.4494477374499 881.4488949679301 42.975 1 0.09488270949952349 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 132424 14505 VYNPELDKW True PC9_epitope_Rep6 1162.5658744720197 1162.56476993586 67.676 2 0.09486651221422814 0.0028084309664974045 0.9438714419765777 ['ENSG00000178502|ENST00000319121|KLHL11'] 4744 8944 ALEAVFGK True NCI_RA007_Epitope_Rep5 833.4647038787699 833.46360993586 41.063 2 0.09485589799092985 0.0028084309664974045 0.9438714419765777 ['ENSG00000147274|ENST00000320676|RBMX', 'nc|ENSG00000147274|P38159-2|RBMX', 'ENST00000567262.5_1_X:135958813-135961586:-|nuORF', 'nc|ENSG00000147274|P38159-3|RBMX', 'ENST00000565907.1_1_X:135961433-135961586:-|nuORF'] 132334 10193 VYLPTHTSL True NCI_RA007_Epitope_Rep2 1029.54949613189 1029.54838993586 44.236 2 0.09485169578804209 0.0028084309664974045 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 106773 15417 SYFSGSHMF True PC9_epitope_Rep6 1061.4276667470501 1061.42656993586 71.458 2 0.09484988031541376 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 48523 11587 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52766993586 51.517 2 0.09484940370081132 0.0028084309664974045 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 77036 12001 NVVNRLTSV True PC9_epitope_Rep2 1000.56654317836 1000.56544993586 51.479 2 0.09484758294680652 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 105433 13202 SVALVIHNV True PC9_epitope_Rep4 950.5549158655001 950.55380993586 58.68 2 0.09483997237480511 0.0028084309664974045 0.9438714419765777 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2'] 135810 13730 YEPPVQESV True PC9_epitope_Rep3 1046.49204082542 1046.49094993586 57.895 2 0.09483716486974272 0.0028084309664974045 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 110366 23762 TILPAIILV True PC9_epitope_Rep1 951.63685458431 951.6363049679301 96.196 1 0.09483666163038319 0.0028084309664974045 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 34796 5855 GQTGVIRSV True PC9_epitope_Rep4 915.5137793295099 915.51268993586 29.396 2 0.09483613845769215 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 6141 19788 APNPVVFVA True PC9_epitope_Rep5 912.5069030439199 912.5063549679301 81.16 1 0.09483597372692994 0.0028084309664974045 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 96385 3371 SEHINEGETA True H1975_Epitope_Rep1 1085.46253160229 1085.46142993586 17.101 2 0.09482857703769254 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 70532 18367 LYTGTVSSF True PC9_epitope_Rep5 973.47566248529 973.47511496793 75.668 1 0.09480492277496805 0.0028084309664974045 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 101986 12584 SPNGQFVAP True PC9_epitope_Rep5 915.4450310633499 915.44392993586 53.404 2 0.09480359454029512 0.0028084309664974045 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 16267 13211 EEIEGLISA True NCI_RA007_Epitope_Rep4 959.4811417885498 959.48004993586 57.941 2 0.09477837420776793 0.0028084309664974045 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 75868 14958 NRDNVGLVL True PC9_epitope_Rep3 998.5508931142199 998.54978993586 62.667 2 0.09477276890999116 0.0028084309664974045 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 84893 11850 QHSISYTL True PC9_epitope_Rep1 947.47124581119 947.47014993586 50.446 2 0.09477215727842381 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000174516|Q8N2H9-4|PELI3', 'nc|ENSG00000174516|Q8N2H9-3|PELI3', 'nc|ENSG00000174516|Q8N2H9-2|PELI3', 'ENSG00000174516|ENST00000320740|PELI3', 'ENSG00000139946|ENST00000267460|PELI2', 'ENSG00000197329|ENST00000358912|PELI1'] 41115 14731 HYMSINDSF True PC9_epitope_Rep4 1112.45969515132 1112.4585899358601 64.596 2 0.09476886704292725 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 86011 15032 QPITPGPSI True PC9_epitope_Rep1 908.4967322830399 908.49618496793 62.64 1 0.09475008519185832 0.0028084309664974045 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 119084 5518 VEHSDLSFSK True NCI_RA007_Epitope_Rep1 1147.5509526838698 1147.54930490379 25.535 3 0.09474922172570306 0.0028084309664974045 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF'] 61289 15633 LLDTVELATY True H1975_Epitope_Rep2 1136.5965058939598 1136.59540993586 65.286 2 0.09473457749010142 0.002828374250480824 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 106957 21826 SYLDSIHFF True PC9_epitope_Rep2 1127.52876068731 1127.52766993586 89.428 2 0.0947258427265835 0.002828374250480824 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 103912 11879 SRMDGEGQLTL True PC9_epitope_Rep6 1205.5710365054497 1205.56992993586 56.916 2 0.09472233694419231 0.002828374250480824 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 14804 23013 DYATIFNNL True PC9_epitope_Rep5 1069.5080252427301 1069.50747496793 93.511 1 0.09470500303215328 0.002828374250480824 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 39772 17405 HQDDFNQLL True PC9_epitope_Rep5 1128.5199869087598 1128.5188899358602 71.948 2 0.09469175584837694 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000171056|Q9BT81-2|SOX7', 'nc|ENSG00000258724|Q96BK5-2|PINX1', 'ENST00000517607.1_1_8:10679572-10690446:-|nuORF', 'ENSG00000254093|ENST00000314787|PINX1'] 105917 15590 SVLDSFLKY True NCI_RA007_Epitope_Rep3 1070.5648118428599 1070.56370993586 68.901 2 0.09467548627661625 0.002828374250480824 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 120279 15459 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 67.393 2 0.09466933754555051 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 96288 7651 SEETPAISP True H1975_Epitope_Rep1 929.4341915961298 929.43364496793 34.408 1 0.0946612369845048 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 62656 17216 LLVTKNWL True PC9_epitope_Rep4 985.5960524014899 985.59494993586 74.23 2 0.09465774308338958 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 34470 19899 GQDGLYIGV True PC9_epitope_Rep2 920.4603467743199 920.4597949679301 81.937 1 0.09465376675878522 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 139670 22346 YTTDFIYQL True PC9_epitope_Rep1 1162.55464108198 1162.5540749679299 90.768 1 0.09465275680572093 0.002828374250480824 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 86931 4751 QRSGNVAEL True PC9_epitope_Rep4 972.4988575413598 972.49776993586 24.837 2 0.09465058270044407 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000527932.1_1_1:46080644-46081380:+|nuORF'] 63640 19986 LPNLQTVTV True PC9_epitope_Rep2 983.56514619603 983.56404993586 82.278 2 0.09465034368333315 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 102527 17066 SQADVIPAV True PC9_epitope_Rep5 898.4759968384599 898.47544496793 70.664 1 0.09464982081975813 0.002828374250480824 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 38505 4603 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 24.211 2 0.09464474023775654 0.002828374250480824 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 24303 15921 FADDMYSLY True H1975_Epitope_Rep3 1123.45321278855 1123.4526749679299 66.691 1 0.09464218374426533 0.002828374250480824 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 28840 15662 FTDNFSFNTY True H1975_Epitope_Rep2 1254.51931820242 1254.51822993586 65.401 2 0.0946403817875709 0.002828374250480824 0.9438714419765777 ['ENSG00000136169|ENST00000611815|SETDB2', 'nc|ENSG00000136169|Q96T68-3|SETDB2', 'nc|ENSG00000136169|Q96T68|SETDB2'] 2392 11741 AEQIVPLSA True H1975_Epitope_Rep2 926.5072969667399 926.5067449679301 50.237 1 0.09463740256207263 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 32729 9330 GHVAPSVSL True PC9_epitope_Rep4 865.4657665079301 865.46466993586 43.495 2 0.0946343910159925 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 24302 16042 FADDMYSLY True H1975_Epitope_Rep2 1123.45321278855 1123.4526749679299 66.906 1 0.09462382596718362 0.002828374250480824 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 83808 6170 QEEPQSLQA True H1975_Epitope_Rep2 1028.4774533904397 1028.47634993586 28.705 2 0.09461225217495522 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-13|PML', 'ENSG00000140464|ENST00000268058|PML', 'nc|ENSG00000140464|P29590-14|PML', 'nc|ENSG00000140464|P29590-10|PML', 'nc|ENSG00000140464|P29590-12|PML', 'nc|ENSG00000140464|P29590-11|PML', 'ENST00000564725.1_1_15:74290377-74317280:+|nuORF', 'ENST00000569161.1_1_15:74315283-74324931:+|nuORF'] 130999 19139 VVLGEFGVRNV True PC9_epitope_Rep1 1187.6662572196299 1187.6651699358601 78.41 2 0.09460794646583505 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 43704 12763 IIQLLDDYPK True H1975_Epitope_Rep3 1216.67033954056 1216.66924993586 54.307 2 0.09460604080970533 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000546564.5_1_12:120636605-120638589:-|nuORF', 'ENST00000548568.5_1_12:120636605-120638589:-|nuORF', 'ENST00000448115.1_1_1:220490746-220490923:-|nuORF', 'ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 8351 16405 ATLSKIIQV True PC9_epitope_Rep5 971.6015317047498 971.60042993586 68.1 2 0.09460430059763852 0.002828374250480824 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 103265 13077 SQTDVKTFL True PC9_epitope_Rep4 1037.53932537101 1037.53822993586 58.192 2 0.09459557758665642 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF'] 91765 11283 RPKPSSSPVIF True PC9_epitope_Rep3 1213.68190728377 1213.68025490379 48.408 3 0.09458765624951701 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 47208 21607 IYAPPLPSL True PC9_epitope_Rep3 969.55351888317 969.55242993586 88.408 2 0.09457656461859819 0.002828374250480824 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1'] 35304 12172 GSSGGVIYL True H1975_Epitope_Rep1 851.43888305375 851.43833496793 51.838 1 0.0945763997513696 0.002828374250480824 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 36569 23594 GVLENIFGV True PC9_epitope_Rep1 946.5123823471798 946.51128993586 95.542 2 0.09456860925273106 0.002828374250480824 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 39478 16790 HPAAFPLPV True PC9_epitope_Rep6 947.52288746123 947.5217899358599 77.086 2 0.09456688069899569 0.002828374250480824 0.9438714419765777 ['ENSG00000108523|ENST00000262482|RNF167'] 77661 6215 PAAAAAAAAAA True PC9_epitope_Rep2 825.4344663796498 825.43336993586 29.303 2 0.09456669701026042 0.002828374250480824 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 86856 17139 QRQQLLVSL True PC9_epitope_Rep1 1083.64004247179 1083.6389499358602 70.748 2 0.09454339127639437 0.002828374250480824 0.9438714419765777 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 40272 12025 HRNGGLITL True PC9_epitope_Rep1 979.55631284783 979.55520993586 51.116 2 0.09454045054579661 0.002828374250480824 0.9438714419765777 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 39910 19332 HQLESILAM True PC9_epitope_Rep1 1040.5324661687598 1040.53136993586 79.166 2 0.09453235938704566 0.002828374250480824 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 7320 11444 ARSELLTTV True PC9_epitope_Rep2 988.55530978832 988.55420993586 49.34 2 0.09451618870929146 0.002828374250480824 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 32727 9850 GHVAPSVSL True PC9_epitope_Rep2 865.4657665079301 865.46466993586 43.223 2 0.0944969322215787 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 135497 6192 YEDIRVSRV True H1975_Epitope_Rep3 1135.59857158263 1135.59691490379 28.83 3 0.09448415242502504 0.002828374250480824 0.9438714419765777 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 89611 5256 RETEGGTVLTA True H1975_Epitope_Rep2 1132.5724164044398 1132.5713099358602 25.284 2 0.09448260120228835 0.002828374250480824 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3'] 138187 15089 YQQQQSLAL True PC9_epitope_Rep3 1077.54547338061 1077.54436993586 63.176 2 0.09448108836918062 0.002828374250480824 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 7209 15314 ARDFTVSAL True PC9_epitope_Rep5 978.5134449763399 978.51234993586 63.917 2 0.09445627166219545 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 54583 12501 LADAINTEF True NCI_RA007_Epitope_Rep3 992.48147614172 992.48036993586 56.403 2 0.09445230009743408 0.002828374250480824 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 71882 7417 MPNGDHIVSA True PC9_epitope_Rep6 1039.47567956863 1039.4745899358602 37.749 2 0.09443764453212589 0.002828374250480824 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 105186 5440 STNSFALNK True NCI_RA007_Epitope_Rep5 980.4927095317599 980.49160993586 27.613 2 0.09443396712867197 0.002828374250480824 0.9438714419765777 ['ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENST00000579209.1_1_17:62758032-62758825:-|nuORF'] 17207 15938 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50652993586 66.451 2 0.09443289892115489 0.002828374250480824 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 108550 7395 TEGGTVLTA True H1975_Epitope_Rep2 847.4287122928699 847.42816496793 33.387 1 0.09441972599453127 0.002828374250480824 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3'] 65124 8030 LSDPQVHTV True PC9_epitope_Rep5 994.5083595959 994.50726993586 35.826 2 0.09441884922395724 0.002828374250480824 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 14001 8597 DRTGTGTLSV True PC9_epitope_Rep2 1005.50908787189 1005.50798993586 38.43 2 0.09441879659643035 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 125360 6022 VLSQQAASVVK True H1975_Epitope_Rep3 1128.65027280232 1128.64916993586 28.177 2 0.09441122658016632 0.002828374250480824 0.9438714419765777 ['ENSG00000239900|ENST00000623063|ADSL'] 11645 11282 DHATTALL True PC9_epitope_Rep3 840.43413202648 840.43302993586 48.404 2 0.09440951647962555 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'ENST00000514280.1_1_5:79646842-79647379:-|nuORF'] 9570 11863 AYAPPPHVI True PC9_epitope_Rep1 963.5178020807899 963.51670993586 50.496 2 0.09439791772382428 0.002828374250480824 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 52138 20587 KLVEFDFLGA True PC9_epitope_Rep4 1137.60701100801 1137.6059099358602 87.34 2 0.09439383126592808 0.002828374250480824 0.9438714419765777 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|9|fusion', 'ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 32676 10561 GHNLQTVQL True PC9_epitope_Rep2 1008.53524305008 1008.53414993586 45.94 2 0.0943865242397342 0.002828374250480824 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 132936 19141 VYTVVDEM[Oxidation]F True PC9_epitope_Rep4 1117.50016336141 1117.49906993586 81.721 2 0.0943837869642915 0.002828374250480824 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 27065 20028 FLPDPSALQNL True PC9_epitope_Rep6 1213.6342883850098 1213.6331899358602 89.704 2 0.09437379025428991 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 123466 6913 VIFTGGVGK True NCI_RA007_Epitope_Rep3 876.5069030439198 876.50580993586 34.296 2 0.09436500459281945 0.002828374250480824 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1', 'ENST00000473474.5_1_1:111715860-111726929:+|nuORF'] 52255 4801 KNLQTVNVDEN True NCI_RA007_Epitope_Rep3 1272.6309939097198 1272.62988993586 25.852 2 0.0943633403129346 0.002828374250480824 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 29286 7316 FVDKPVAY True H1975_Epitope_Rep2 937.4909186266098 937.48982993586 33.081 2 0.09435080451465368 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000115750|Q53T94-2|TAF1B', 'ENSG00000115750|ENST00000263663|TAF1B', 'nc|ENSG00000115750|Q53T94-3|TAF1B'] 67288 5881 LTDPDGALAK True H1975_Epitope_Rep3 999.5236753068699 999.52256993586 27.632 2 0.09434762366223645 0.002828374250480824 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000552390.5_1_12:57926966-57928919:-|nuORF', 'ENST00000551872.1_1_12:57927977-57928175:-|nuORF'] 5860 6612 APGLPTARA True PC9_epitope_Rep4 852.4817509252399 852.48064993586 32.592 2 0.09434077352296592 0.002828374250480824 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 95391 8723 SAINEVVTR True PC9_epitope_Rep1 987.53490869691 987.53380993586 38.39 2 0.09433731239824467 0.002828374250480824 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 24595 20152 FAMPYFIQV True H1975_Epitope_Rep2 1114.55213898418 1114.5510499358602 83.508 2 0.09433565143937866 0.002828374250480824 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 58549 13924 LFDQAFGLPR True NCI_RA007_Epitope_Rep5 1162.6134933707797 1162.6123899358602 60.243 2 0.09433509096980154 0.002828374250480824 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 101507 11537 SPAAPVITA True PC9_epitope_Rep4 825.45961849833 825.4590749679301 52.14 1 0.09433175770474579 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 88241 20738 QYEEQFVTL True PC9_epitope_Rep5 1155.5448046742697 1155.54427496793 84.827 1 0.09433163115638032 0.002828374250480824 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 106368 5072 SVSNVVITK True NCI_RA007_Epitope_Rep5 945.54949613189 945.54838993586 26.21 2 0.0943302076260172 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 132917 16623 VYTVVDEMF True NCI_RA007_Epitope_Rep3 1101.5052483614097 1101.50467496793 73.169 1 0.09432911101080996 0.002828374250480824 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 57896 8141 LEQIGAPQA True H1975_Epitope_Rep1 925.4868958753299 925.48578993586 36.254 2 0.09432806796148738 0.002828374250480824 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 123070 14549 VHAEEVIVL True PC9_epitope_Rep6 1007.5651461960299 1007.56404993586 67.857 2 0.09432565969663587 0.002828374250480824 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'KDM3B|p.A1619Rfs*25|1|0.09|ENSG00000120733|chr5:138429926-138429927|-/C|frameshift_variant'] 83833 12385 QEFRFLPPP True NCI_RA007_Epitope_Rep3 1129.5920296502097 1129.59092993586 55.92 2 0.09432302462684651 0.002828374250480824 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 9306 10581 AVSDGVIKV True PC9_epitope_Rep4 886.5123823471799 886.51128993586 48.44 2 0.09431777018078089 0.002828374250480824 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 99193 22951 SLASLLVSV True PC9_epitope_Rep5 887.5327834385901 887.53168993586 93.269 2 0.09430914284552946 0.002828374250480824 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 107094 21737 SYMFVDENTF True PC9_epitope_Rep3 1251.5117902938298 1251.51127496793 88.905 1 0.09430673282025531 0.002828374250480824 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 67094 10386 LTDAIDEY True H1975_Epitope_Rep1 938.4232925592601 938.42274496793 44.898 1 0.09430102634442676 0.002828374250480824 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 72492 15750 MVAPAVASV True PC9_epitope_Rep1 843.4524249429099 843.45132993586 65.406 2 0.09428994464270832 0.002828374250480824 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 27602 9366 FPSIVGRP True H1975_Epitope_Rep1 871.49158733295 871.49048993586 40.934 2 0.09428564966916023 0.002828374250480824 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 96559 12548 SELPIVTPA True H1975_Epitope_Rep2 925.51204799401 925.51094993586 53.36 2 0.09428194909361097 0.002828374250480824 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 103425 23125 SQYPEIIFL True PC9_epitope_Rep3 1108.580461907 1108.57936993586 94.219 2 0.0942695617179189 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 113649 7951 TRDEDHIAL True PC9_epitope_Rep3 1068.51998690876 1068.5188899358602 35.562 2 0.094264935508349 0.002828374250480824 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 113410 21589 TQLNMFQTL True PC9_epitope_Rep5 1094.54303085246 1094.54247496793 88.082 1 0.09425990881516216 0.002828374250480824 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 103916 15536 SRMPGELVL True PC9_epitope_Rep4 1000.5375515491999 1000.53644993586 67.683 2 0.09425120232448002 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 34686 18395 GQLPNLQTV True PC9_epitope_Rep3 968.5290950404801 968.52798993586 75.963 2 0.09424415759354524 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 114406 8789 TSDSTVYDY True H1975_Epitope_Rep2 1049.41893545481 1049.41837496793 38.771 1 0.0942376965132989 0.002828374250480824 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 31316 8789 GEAEAAVIEA True H1975_Epitope_Rep3 958.4607406971398 958.4601949679301 38.813 1 0.09423433732400653 0.002828374250480824 0.9438714419765777 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 17671 13159 EHSGPPIVI True PC9_epitope_Rep2 947.5076313199099 947.50652993586 55.887 2 0.09423012236813347 0.002828374250480824 0.9438714419765777 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 108596 5089 TEIGSIHSA True NCI_RA007_Epitope_Rep5 913.45051036661 913.44940993586 26.273 2 0.0942234206873495 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF'] 100180 20977 SLLGGDVVSV True PC9_epitope_Rep1 944.51786165044 944.51731496793 85.513 1 0.09421657068380228 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000157514|Q99576|TSC22D3'] 140514 15769 YYITGNLETF True NCI_RA007_Epitope_Rep4 1219.57610480255 1219.5750099358602 68.482 2 0.0942152025107724 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 130405 11593 VTVPPGPSL True NCI_RA007_Epitope_Rep1 865.49091862661 865.48982993586 49.065 2 0.09421476824138435 0.002828374250480824 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 117188 13520 TYTDVTPRQF True PC9_epitope_Rep3 1226.59315184902 1226.5920499358601 57.055 2 0.09421192525578838 0.002828374250480824 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 119385 10950 VENSYSISV True H1975_Epitope_Rep2 996.47639076128 996.47528993586 47.15 2 0.09420532406366121 0.002828374250480824 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF', 'ENST00000488923.1_1_2:242186148-242186740:-|nuORF'] 68782 12941 LVDPSVYGY True H1975_Epitope_Rep1 1011.49131254943 1011.4907749679301 54.852 1 0.09419161821155089 0.002828374250480824 0.9438714419765777 ['ENSG00000107164|ENST00000319725|FUBP3'] 139643 15071 YTSDYFISY True H1975_Epitope_Rep3 1157.49170647225 1157.49117496793 63.366 1 0.09419129180795237 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 136459 5148 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 25.179 2 0.09418787658505016 0.002828374250480824 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 43905 20663 ILDPHVVLL True PC9_epitope_Rep5 1017.6222671493299 1017.6211699358599 84.534 2 0.0941590744432298 0.002828374250480824 0.9438714419765777 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 54185 7794 KYPDRVPVI True NCI_RA007_Epitope_Rep3 1085.62332977849 1085.62222993586 37.782 2 0.0941587539490997 0.002828374250480824 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 69866 10588 LYAPYSTHF True NCI_RA007_Epitope_Rep3 1097.51819600361 1097.5170899358602 48.699 2 0.09413974069462511 0.002828374250480824 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 85115 16914 QISDTSVVL True PC9_epitope_Rep4 960.51277627 960.51166993586 73.048 2 0.09413450077375408 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 9124 11346 AVLPRLHQL True PC9_epitope_Rep4 1045.63964854897 1045.63854993586 51.419 2 0.09413065057720434 0.002828374250480824 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000463906.1_1_1:43630116-43636618:-|nuORF'] 37640 9052 HADPTELAL True NCI_RA007_Epitope_Rep3 965.4818104948899 965.48070993586 42.698 2 0.09411637724738904 0.002828374250480824 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 120583 11660 VGAGAPVYL True H1975_Epitope_Rep1 845.46470387877 845.4641549679301 49.839 1 0.09411611734828956 0.002828374250480824 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 116352 20115 TVYEGFISA True PC9_epitope_Rep1 985.4756624852898 985.47511496793 82.202 1 0.09411439495330085 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 35570 15394 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.51670993586 64.221 2 0.09411307251552833 0.002828374250480824 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 135914 11291 YETLTITQA True H1975_Epitope_Rep1 1038.5233409536997 1038.5222499358601 48.408 2 0.09410429738954593 0.002828374250480824 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF', 'ENST00000587313.1_1_18:12913471-12913552:+|nuORF', 'ENST00000420241.1_1_21:28739411-28739597:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF'] 71834 21788 MPFAGLISA True PC9_epitope_Rep2 905.46807500705 905.4675249679301 89.278 1 0.09408906668750465 0.002828374250480824 0.9438714419765777 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 66596 6223 LSSPATLNSR True PC9_epitope_Rep4 1044.5563724174801 1044.55526993586 30.984 2 0.09408527523555886 0.002828374250480824 0.9438714419765777 ['CON__P00761'] 119143 10276 VEINENLPA True H1975_Epitope_Rep2 997.5080252427299 997.50692993586 44.533 2 0.09405936098442416 0.002845070422535211 0.9438714419765777 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF', 'ENST00000317633.13_2_5:70196496-70197687:+|nuORF'] 26345 19192 FIFSDTHEL True PC9_epitope_Rep2 1107.52367530687 1107.52256993586 79.194 2 0.09405729737916842 0.002845070422535211 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 97851 4652 SHITPSTQQHL True PC9_epitope_Rep2 1247.62584895963 1247.62420490379 23.266 3 0.09405426734180597 0.002845070422535211 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 72076 8693 MRDPDDQYKL True PC9_epitope_Rep2 1279.58668656959 1279.58503490379 38.801 3 0.09405122102138136 0.002845070422535211 0.9438714419765777 ['ENSG00000130332|ENST00000252622|LSM7'] 35683 4183 GTNPGIITK True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 22.619 2 0.09404506165760308 0.002845070422535211 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 72905 14697 NAVYTFETL True NCI_RA007_Epitope_Rep3 1056.51277627 1056.51166993586 65.208 2 0.09404125212819242 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 131081 11387 VVLVLAGR True PC9_epitope_Rep6 825.5436229058099 825.54252993586 54.851 2 0.09403927931470864 0.002845070422535211 0.9438714419765777 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 67330 21683 LTDQTLIYL True PC9_epitope_Rep2 1078.5910265906998 1078.58992993586 88.88 2 0.0940362143829213 0.002845070422535211 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 38700 11349 HHSGNTYFL True PC9_epitope_Rep5 1074.48829285766 1074.4871899358602 48.651 2 0.09402979655335558 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 21691 17239 ERYFISHVL True PC9_epitope_Rep5 1162.61349337078 1162.6118549037901 71.327 3 0.09402955139686242 0.002845070422535211 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 86960 9568 QRVDSPVTV True PC9_epitope_Rep5 999.5349086969098 999.53380993586 41.764 2 0.09402131867295387 0.002845070422535211 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'ENST00000567642.1_1_16:30087698-30092679:+|nuORF'] 139103 10457 YSNKEIFL True H1975_Epitope_Rep3 1012.5229470308799 1012.52184993586 45.285 2 0.09402102924630172 0.002845070422535211 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 95573 6406 SASGPLHSV True PC9_epitope_Rep3 853.4293809992101 853.42828993586 29.666 2 0.09401806321649966 0.002845070422535211 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 9554 21666 AYALLSHFL True PC9_epitope_Rep1 1033.5596668927699 1033.55856993586 88.167 2 0.09400236492534136 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 72618 9401 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep1 1074.57433136118 1074.5732299358601 41.02 2 0.09400231662892598 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 17889 5021 EIDKNDHLY True H1975_Epitope_Rep2 1145.53530261973 1145.53366490379 24.396 3 0.09399515152954954 0.002845070422535211 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 132925 22094 VYTVVDEMF True PC9_epitope_Rep3 1101.5052483614097 1101.50467496793 90.281 1 0.09399487081040701 0.002845070422535211 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 64567 10777 LRDPGSVIV True PC9_epitope_Rep6 954.5498304850599 954.54872993586 52.285 2 0.09399186683345437 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'KDM5C|p.Q1138P|2|0.17|ENSG00000126012|chrX:53194956-53194956|T/G|missense_variant', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 7937 19023 ATDFGEALV True PC9_epitope_Rep4 921.4443623570098 921.44381496793 81.262 1 0.0939895494504408 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 34836 9326 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42828993586 40.729 2 0.09398443600554264 0.002845070422535211 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 77043 9677 NVVVVDGVR True PC9_epitope_Rep1 955.5450794577898 955.5439899358599 42.079 2 0.09398328519725305 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000138029|P55084-2|HADHB', 'ENSG00000138029|ENST00000317799|HADHB'] 76982 4682 NVSDAVAQSTR True H1975_Epitope_Rep3 1146.5629143499002 1146.56180993586 23.133 2 0.09397371022753288 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 73801 8562 NHDTALTL True PC9_epitope_Rep6 883.43994568291 883.43884993586 42.705 2 0.09395528895777108 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'ENST00000506930.2_1_5:139884419-139889237:+|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 48475 5533 KEERPPELP True H1975_Epitope_Rep3 1093.5767735088898 1093.57566993586 26.331 2 0.09395197401107738 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 117071 16488 TYQVLAVTF True NCI_RA007_Epitope_Rep3 1040.5542471591598 1040.5531499358601 72.646 2 0.09394969451619334 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 84612 5981 QHDPSAVAV True PC9_epitope_Rep3 922.4508447197799 922.44974993586 28.061 2 0.09393829713041825 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 86376 17664 QQLGTAVEL True PC9_epitope_Rep1 957.5131106231698 957.51200993586 72.739 2 0.09393632052853129 0.002845070422535211 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 1104 6064 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 28.302 2 0.09392133934759911 0.002845070422535211 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 74428 13582 NIVPVIAKA True PC9_epitope_Rep1 923.5804023373499 923.57930993586 57.099 2 0.09392130065936953 0.002845070422535211 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 1124 7875 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 35.237 2 0.09391616780210979 0.002845070422535211 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 52258 6903 KNLQTVNVDEN True PC9_epitope_Rep1 1272.6309939097198 1272.62988993586 31.358 2 0.09391229720557068 0.002845070422535211 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 76311 11672 NSDWHLVNY True H1975_Epitope_Rep2 1146.50942222506 1146.50832993586 49.969 2 0.09391027834317067 0.002845070422535211 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 75873 14772 NRDNVGLVL True PC9_epitope_Rep5 998.5508931142199 998.54978993586 61.82 2 0.0938929352626576 0.002845070422535211 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 106575 7152 SVYDHQGIFK True NCI_RA007_Epitope_Rep3 1192.58767254576 1192.58602490379 35.25 3 0.09388600953037846 0.002845070422535211 0.9438714419765777 ['ENSG00000153989|ENST00000368494|NUS1'] 75401 15492 NQFPGFKEV True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 64.412 2 0.09387501908697923 0.002845070422535211 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 60636 6392 LITEDVQGK True PC9_epitope_Rep4 1001.5393253710098 1001.53822993586 31.677 2 0.09387438884942895 0.002845070422535211 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF'] 128899 9169 VSTEVDARL True PC9_epitope_Rep4 988.5189242795998 988.51782993586 42.862 2 0.09385955288219544 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 32015 6169 GETVPAPSA True H1975_Epitope_Rep3 827.40249754503 827.40194496793 28.742 1 0.09385679365392866 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 65255 11755 LSEGVTISY True H1975_Epitope_Rep1 967.4862271689901 967.4856749679301 50.21 1 0.09385097420084386 0.002845070422535211 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 2573 5198 AERYDDMAA True NCI_RA007_Epitope_Rep3 1040.4233096425999 1040.42220993586 27.446 2 0.09383949227280129 0.002845070422535211 0.9438714419765777 ['ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 2437 7402 AEQLTAPPSA True H1975_Epitope_Rep1 983.4923751785899 983.49126993586 33.476 2 0.09382515379585288 0.002845070422535211 0.9438714419765777 ['ENSG00000075218|ENST00000454366|GTSE1', 'ENST00000466510.5_1_22:46711975-46722552:+|nuORF', 'ENST00000479645.1_1_22:46711975-46724816:+|nuORF'] 9478 10677 AVYEGHVSCV True PC9_epitope_Rep5 1062.4804305958999 1062.47932993586 46.058 2 0.09381006384369567 0.002845070422535211 0.9438714419765777 ['ENSG00000105887|ENST00000393085|MTPN'] 13894 6140 DRDPASGTAL True PC9_epitope_Rep6 1001.47778774361 1001.47668993586 32.043 2 0.09380826971403453 0.002845070422535211 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 34472 20127 GQDGLYIGV True PC9_epitope_Rep3 920.4603467743199 920.4597949679301 82.672 1 0.0938076815986755 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 108356 4550 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 22.623 2 0.0937811002106791 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 32990 8910 GIVEFSGK True PC9_epitope_Rep4 835.44396843419 835.44286993586 41.81 2 0.09377966452004367 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 109592 12842 THDEAINVL True PC9_epitope_Rep1 1010.5032742154599 1010.50216993586 54.271 2 0.09377392493053642 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'ENST00000539508.5_1_9:13106966-13133978:-|nuORF'] 97812 13732 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 57.902 2 0.09377167476610339 0.002845070422535211 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 75852 9678 NRDLATPVM True PC9_epitope_Rep6 1015.51206507735 1015.51096993586 47.605 2 0.09374113385155323 0.002845070422535211 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 31767 10810 GELLFVHSA True H1975_Epitope_Rep3 971.50763131991 971.50652993586 46.659 2 0.09373462085998539 0.002845070422535211 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 47104 6818 IVVVTAGVR True NCI_RA007_Epitope_Rep3 912.5756513100798 912.57454993586 33.926 2 0.09373418875129515 0.002845070422535211 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 83872 12735 QEIATVVVP True H1975_Epitope_Rep1 954.5385970950199 954.5380449679301 54.045 1 0.09373299665111123 0.002845070422535211 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 1526 13496 AEEQPPFGVYA True H1975_Epitope_Rep2 1206.5557037111398 1206.55460993586 57.045 2 0.09373220851865519 0.002845070422535211 0.9438714419765777 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2', 'ENST00000483432.1_1_9:140070142-140074912:-|nuORF'] 6485 7208 APTGDLPRA True PC9_epitope_Rep5 896.4715801643599 896.47048993586 32.69 2 0.09373024323758444 0.002845070422535211 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 135904 10404 YETDNNIVV True H1975_Epitope_Rep2 1065.49785448185 1065.4967499358602 45.032 2 0.09372165990887076 0.002845070422535211 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 132948 21784 VYTVVDEM[Oxidation]FL True PC9_epitope_Rep1 1230.58422733854 1230.5831299358601 88.622 2 0.09371929956024629 0.002845070422535211 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 34584 19843 GQGEVLVYV True PC9_epitope_Rep2 962.5072969667398 962.5067449679301 81.717 1 0.09371313046763205 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 53796 13281 KYFLKPEVL True PC9_epitope_Rep6 1135.6641319613097 1135.66302993586 62.739 2 0.0937106086278576 0.002845070422535211 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 11666 11333 DHDITSQL True PC9_epitope_Rep1 927.42977492203 927.42866993586 48.472 2 0.0937080220546693 0.002845070422535211 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 71917 8512 MPRQLSAAAA True PC9_epitope_Rep1 1014.5280494946599 1014.52694993586 37.578 2 0.09370169709273417 0.002845070422535211 0.9438714419765777 ['ENSG00000078081|ENST00000265598|LAMP3'] 82118 16976 PTDAFTVFY True H1975_Epitope_Rep1 1059.49131254943 1059.4907749679298 70.722 1 0.09369842233888073 0.002845070422535211 0.9438714419765777 ['ENST00000465121.5_1_3:52018080-52021658:+|nuORF', 'nc|ENSG00000243989|Q03154-2|ACY1', 'nc|ENSG00000243989|Q03154-3|ACY1', 'nc|ENSG00000243989|Q03154-4|ACY1', 'ENSG00000243989|ENST00000636358|ACY1'] 17627 9463 EHNIFHNEV True PC9_epitope_Rep5 1137.5203212619301 1137.51922993586 41.355 2 0.09369283502741843 0.002845070422535211 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 8228 18344 ATIGELAQV True PC9_epitope_Rep2 900.4916469025999 900.49054993586 75.89 2 0.09369270427822315 0.002845070422535211 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 91772 10900 RPKPSSSPVIF True PC9_epitope_Rep5 1213.68190728377 1213.68080993586 46.914 2 0.09368832515752236 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 102156 13587 SPRPPLISV True PC9_epitope_Rep4 964.57056592964 964.56946993586 60.156 2 0.0936880967979664 0.002845070422535211 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 118836 3659 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 19.026 2 0.09368365481006898 0.002845070422535211 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 95258 10990 SADPNVVDL True H1975_Epitope_Rep1 928.45017601344 928.44962496793 47.237 1 0.09368275276901813 0.002845070422535211 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 100654 7422 SLQSVAEER True PC9_epitope_Rep3 1017.5090878718898 1017.50798993586 33.556 2 0.09368200443909482 0.002845070422535211 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 96649 17291 SENMFSFEV True H1975_Epitope_Rep2 1088.44846176128 1088.44736993586 71.803 2 0.09367482438149757 0.002845070422535211 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 6603 18864 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 77.784 2 0.09367190955936369 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 74209 16552 NIDINNNEL True PC9_epitope_Rep2 1057.5040024914501 1057.50290993586 68.906 2 0.09366378802328627 0.002845070422535211 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 102567 17055 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51234993586 70.854 2 0.09366238685888195 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 74221 13366 NIDPITM[Oxidation]AY True H1975_Epitope_Rep2 1052.48484765044 1052.48374993586 56.545 2 0.09366174813205932 0.002845070422535211 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 119837 6242 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51676993586 28.967 2 0.0936595399536646 0.002845070422535211 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 132560 14240 VYPLMKEYF True NCI_RA007_Epitope_Rep4 1188.5889184157197 1188.58782993586 62.055 2 0.09365241047701399 0.002845070422535211 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 46824 13476 IVEESVTGV True PC9_epitope_Rep1 931.4862271689899 931.48512993586 56.693 2 0.09364914479774204 0.002845070422535211 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2', 'ENST00000492628.1_1_7:129040195-129045055:+|nuORF'] 108969 8001 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 35.725 2 0.09364308282246349 0.002845070422535211 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 140882 20183 YYTSVTPVL True PC9_epitope_Rep5 1041.5382627418498 1041.53767496793 82.683 1 0.09364007982777163 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 130287 20986 VTTDVSYLL True PC9_epitope_Rep2 1009.53317736141 1009.53208993586 86.173 2 0.09363978893201137 0.002845070422535211 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 30262 8650 GAAKDLPGV True PC9_epitope_Rep3 826.4548674710599 826.45376993586 38.224 2 0.09363912086119772 0.002845070422535211 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 35547 15618 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.5172549679301 64.894 1 0.09363676147151918 0.002845070422535211 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 28106 13132 FREDSVVL True PC9_epitope_Rep4 963.5025459394699 963.50144993586 58.407 2 0.09362656136583278 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.T809Rfs*37|1|0.17|ENSG00000106608|chr7:43877038-43877038|T/-|frameshift_variant'] 40036 7717 HQVPAVSSV True PC9_epitope_Rep1 922.4872302285 922.48612993586 34.503 2 0.09362095837678658 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 95458 20212 SALPFITYL True H1975_Epitope_Rep3 1023.5640835668698 1023.5635749679301 84.539 1 0.09361950141794186 0.002845070422535211 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 9218 7393 AVPTNIIAAK True NCI_RA007_Epitope_Rep5 996.5967806774798 996.59568993586 35.115 2 0.09361121236363501 0.002845070422535211 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 70410 23560 LYQILQGIVF True PC9_epitope_Rep2 1192.6855956818797 1192.68448993586 96.099 2 0.093604519612631 0.002845070422535211 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 39901 14726 HQLEIFDAL True NCI_RA007_Epitope_Rep3 1084.5553097883198 1084.5542099358602 65.33 2 0.09359988197279295 0.002845070422535211 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1-LYPLA1|1|fusion', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 119094 11075 VEIAYSDVA True H1975_Epitope_Rep2 965.4705771048499 965.47002496793 47.632 1 0.09359835532749501 0.002845070422535211 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 6685 15149 AQAPGVITGV True PC9_epitope_Rep1 911.5076313199099 911.50652993586 63.092 2 0.09358892269978368 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 86820 13887 QRPPTIVL True PC9_epitope_Rep1 922.5600012459399 922.55890993586 58.256 2 0.09357888257017132 0.002845070422535211 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 88195 23383 QYAPLLAVF True PC9_epitope_Rep1 1020.5644179200399 1020.56332993586 94.724 2 0.09357574007160468 0.002845070422535211 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 131706 17993 VWSDVTPLTF True NCI_RA007_Epitope_Rep4 1163.58627556343 1163.5857749679299 77.855 1 0.09357322300510947 0.002845070422535211 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 27791 19789 FQEGDIILV True PC9_epitope_Rep6 1032.5491617787197 1032.5480699358602 88.774 2 0.09355129039241292 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 2143 11420 AELWGEQAEA True H1975_Epitope_Rep3 1102.49310345458 1102.49200993586 49.043 2 0.09352476719732633 0.002845070422535211 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 43262 13250 IHDGLTVHL True PC9_epitope_Rep3 1003.54507945779 1003.5439899358599 55.998 2 0.093523950932931 0.002845070422535211 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 83879 12809 QEIATVVVP True H1975_Epitope_Rep3 954.5385970950199 954.5380449679301 54.489 1 0.09352042418109312 0.002845070422535211 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 39833 11297 HQGATPLVL True PC9_epitope_Rep4 934.5236157372199 934.52250993586 51.231 2 0.0935187453584929 0.002845070422535211 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 101183 18882 SLVSSLYKV True PC9_epitope_Rep5 994.5698972232999 994.56880993586 77.649 2 0.09351554074018523 0.002845070422535211 0.9438714419765777 ['ENSG00000122591|ENST00000432176|HYCC1', 'ENST00000467005.5_1_7:23023511-23030730:-|nuORF', 'nc|ENSG00000122591|Q9BYI3-3|HYCC1'] 57941 11824 LEQNIQLPAA True H1975_Epitope_Rep1 1095.59242357303 1095.5913299358601 50.476 2 0.09350875444530002 0.002845070422535211 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 105084 10900 STLDGSLHAV True PC9_epitope_Rep4 998.5032742154599 998.50216993586 49.692 2 0.0934980138642781 0.002845070422535211 0.9438714419765777 ['ENST00000583028.1_1_17:62175367-62207458:-|nuORF', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENSG00000178607|ENST00000433197|ERN1'] 140855 22065 YYTEFPTVL True PC9_epitope_Rep5 1131.54882742555 1131.54827496793 89.901 1 0.09349472199749365 0.002845070422535211 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 74826 21215 NLPIFLPRV True PC9_epitope_Rep5 1067.64915060351 1067.6480499358602 86.651 2 0.09349191050366354 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 53851 19754 KYGPVFSF True PC9_epitope_Rep1 943.4803539429099 943.47924993586 80.811 2 0.09349182246254979 0.002845070422535211 0.9438714419765777 ['ENSG00000001630|ENST00000003100|CYP51A1'] 93612 12337 RTADGEFMAV True PC9_epitope_Rep4 1095.50189431647 1095.5007899358602 55.263 2 0.09348981822905773 0.002845070422535211 0.9438714419765777 ['ENST00000506639.5_1_5:33994220-34005893:-|nuORF', 'ENSG00000242110|ENST00000335606|AMACR', 'nc|ENSG00000242110|Q9UHK6-5|AMACR'] 109658 5221 THDQAVQAL True PC9_epitope_Rep6 981.4879585044899 981.48686993586 27.852 2 0.09348960656637346 0.002845070422535211 0.9438714419765777 ['ENSG00000168807|ENST00000336278|SNTB2', 'ENST00000360496.5_1_16:69221543-69279522:+|nuORF', 'ENST00000528525.1_1_16:69221558-69294134:+|nuORF', 'nc|ENSG00000168807|Q13425-2|SNTB2', 'SNTB2-CIRH1A|1|fusion'] 95215 11428 SAAPAIQL True H1975_Epitope_Rep2 769.43340375049 769.4328549679301 49.01 1 0.0934839798466057 0.002845070422535211 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2'] 48319 2625 KDREDYVP True NCI_RA007_Epitope_Rep3 1020.4876241513199 1020.48652993586 14.786 2 0.0934811867741298 0.002845070422535211 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 40093 9792 HRDERVLSL True PC9_epitope_Rep5 1123.60980497267 1123.60816490379 42.634 3 0.09348100159546179 0.002845070422535211 0.9438714419765777 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 99940 19258 SLIGHLQTL True PC9_epitope_Rep3 980.5654805492001 980.56438993586 79.297 2 0.09347719189421722 0.002845070422535211 0.9438714419765777 ['ENSG00000138166|ENST00000369583|DUSP5'] 131121 13476 VVPAALKVV True PC9_epitope_Rep4 894.59023874506 894.58914993586 59.732 2 0.09347638725341371 0.002845070422535211 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 107766 21429 TAMDVVYAL True PC9_epitope_Rep2 981.4841189940099 981.48357496793 87.899 1 0.093476302626891 0.002845070422535211 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 34850 9436 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42828993586 41.234 2 0.09346717998595237 0.002845070422535211 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 35666 5790 GTM[Oxidation]TGMLYK True NCI_RA007_Epitope_Rep4 1016.46708941132 1016.46598993586 28.895 2 0.09344801591243557 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 139473 17872 YTGEGQWEV True PC9_epitope_Rep1 1067.45598966987 1067.4548899358601 73.539 2 0.09344094624036442 0.002845070422535211 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 102923 15916 SQIHDIVLV True PC9_epitope_Rep4 1022.5760452328999 1022.5754749679301 69.147 1 0.0934396378621537 0.002845070422535211 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 11871 16832 DHNLLLYEA True PC9_epitope_Rep6 1086.53457434374 1086.53346993586 77.257 2 0.09343862634322267 0.002845070422535211 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 139641 15210 YTSDYFISY True H1975_Epitope_Rep2 1157.49170647225 1157.49117496793 63.661 1 0.09343474113650853 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 106130 5100 SVNSTVLVK True NCI_RA007_Epitope_Rep3 945.5494961318899 945.54838993586 27.054 2 0.09342541755976524 0.002845070422535211 0.9438714419765777 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML'] 113342 6188 TQKSLSLSPG True NCI_RA007_Epitope_Rep1 1016.5502244078799 1016.54912993586 28.105 2 0.0934221955344406 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 7462 14582 ASDMLQLEY True H1975_Epitope_Rep2 1068.4797618895598 1068.47917496793 61.246 1 0.09341701922482633 0.002845070422535211 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 117235 16518 TYVSGTLRF True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 68.537 2 0.0934163693383974 0.002845070422535211 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1'] 110018 10498 THTTPVLL True PC9_epitope_Rep4 880.5018176634799 880.50072993586 48.101 2 0.09341099362309904 0.002845070422535211 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 23908 18557 EYMLQNHVF True PC9_epitope_Rep5 1179.5382798251899 1179.5371899358602 76.402 2 0.09340985701560084 0.002845070422535211 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 84080 6572 QEQEGGPAVP True H1975_Epitope_Rep3 1010.4668887067396 1010.46578993586 30.235 2 0.09340801421541763 0.002845070422535211 0.9438714419765777 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 641 7461 AATGGGIVRV True PC9_epitope_Rep4 899.51886470995 899.51776993586 36.054 2 0.09340641361268542 0.002845070422535211 0.9438714419765777 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000561993.5_1_16:8732964-8736423:+|nuORF'] 94936 10134 RYPDSHQLF True PC9_epitope_Rep4 1161.55670677065 1161.5550749037902 46.658 3 0.09340300660054883 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 1634 8992 AEFVEVTK True PC9_epitope_Rep5 921.4807478657299 921.47964993586 39.533 2 0.09339922538097238 0.002845070422535211 0.9438714419765777 ['CON__P02769'] 11765 17095 DHIHIIAL True PC9_epitope_Rep3 930.52870111766 930.52760993586 70.907 2 0.09339753340646652 0.002845070422535211 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 95646 12040 SAVPPGTSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 51.627 2 0.09339636451962487 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 117079 21146 TYQVLAVTF True PC9_epitope_Rep4 1040.5542471591598 1040.5531499358601 89.501 2 0.09339227497763905 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 132055 19177 VYIHGGGWAL True PC9_epitope_Rep5 1071.5501648382299 1071.5490699358602 78.801 2 0.09338596419850707 0.002845070422535211 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1'] 138897 5185 YSDVHNCSY True H1975_Epitope_Rep3 1086.40765957846 1086.40656993586 25.04 2 0.0933812157380352 0.002845070422535211 0.9438714419765777 ['ENST00000557983.1_1_15:80423514-80429967:+|nuORF', 'nc|ENSG00000086666|Q6FIF0-2|ZFAND6', 'ENSG00000086666|ENST00000261749|ZFAND6'] 75848 10308 NRDLATPVM True PC9_epitope_Rep4 1015.51206507735 1015.51096993586 47.336 2 0.09337865293627727 0.002845070422535211 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 26088 16325 FHEGDVITL True PC9_epitope_Rep4 1029.51311062317 1029.51200993586 70.757 2 0.09337424737820839 0.002845070422535211 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 37997 9454 HEHIEILTV True H1975_Epitope_Rep1 1089.58185888933 1089.5807699358602 41.282 2 0.09337227541910643 0.002845070422535211 0.9438714419765777 ['ENST00000487133.1_1_X:119739298-119742228:+|nuORF', 'nc|ENSG00000232119|Q9ULC4-2|MCTS1', 'ENSG00000232119|ENST00000371317|MCTS1', 'nc|ENSG00000232119|Q9ULC4-3|MCTS1', 'MCTS1|p.Y79Ifs*4|1|0.59|ENSG00000232119|chrX:120606145-120606145|T/-|frameshift_variant'] 21219 18732 ERFNVPVSL True PC9_epitope_Rep2 1059.5712942056298 1059.57077496793 77.431 1 0.09336554704198932 0.002845070422535211 0.9438714419765777 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 99624 20770 SLFRVITEV True PC9_epitope_Rep1 1062.60734536118 1062.6062499358602 84.719 2 0.09336233398979893 0.002845070422535211 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 126990 13047 VPWMPPGKSSA True PC9_epitope_Rep1 1155.57466533391 1155.5735699358602 55.054 2 0.09335984896844025 0.002845070422535211 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 127482 6246 VQTEVNREL True PC9_epitope_Rep6 1086.56693710118 1086.5658499358601 32.515 2 0.09335756750394202 0.002845070422535211 0.9438714419765777 ['BLZF1|p.A167Lfs*14|1|0.53|ENSG00000117475|chr1:169378359-169378359|G/-|frameshift_variant', 'ENSG00000117475|ENST00000367808|BLZF1'] 84619 5972 QHDPSAVAV True PC9_epitope_Rep5 922.4508447197799 922.4502949679301 27.966 1 0.09335741522758151 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 108664 7496 TELESTVSA True H1975_Epitope_Rep2 935.4447562798299 935.44364993586 33.783 2 0.09335376240753938 0.002845070422535211 0.9438714419765777 ['SOS2|p.P1259*|1|0.09|ENSG00000100485|chr14:50118556-50118569|GAGGAGTGCTTGGC/-|frameshift_variant', 'ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 27816 19000 FQGVEFHYV True PC9_epitope_Rep5 1124.5290950404801 1124.5279899358602 78.111 2 0.09334610263562867 0.002845070422535211 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 84947 19756 QHWPVFVEV True PC9_epitope_Rep4 1139.5763795860698 1139.5752899358602 84.115 2 0.09334003375011421 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000114544|Q96GZ6-6|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-7|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-5|SLC41A3', 'ENSG00000114544|ENST00000360370|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-2|SLC41A3', 'nc|ENSG00000114544|Q96GZ6|SLC41A3'] 97631 7622 SHANSAVVL True PC9_epitope_Rep3 896.47158016436 896.47048993586 34.315 2 0.09333954033159625 0.002845070422535211 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 72198 11758 MRSDTPAML True PC9_epitope_Rep3 1020.47323704048 1020.47212993586 50.248 2 0.09333599023598149 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 103577 15077 SRDGMNIVL True PC9_epitope_Rep2 1003.5120650773499 1003.51096993586 63.252 2 0.09331777739462488 0.0028694404591104736 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 107198 18066 SYPDLLPTF True NCI_RA007_Epitope_Rep3 1051.52261267771 1051.5215099358602 79.159 2 0.09331657524734598 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 104413 14345 SSIEHLTTL True PC9_epitope_Rep1 999.52367530687 999.52256993586 60.001 2 0.0933147157911247 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 9007 15847 AVIDVGINRV True PC9_epitope_Rep2 1054.61349337078 1054.6123899358602 66.215 2 0.0933097622607589 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000065911|P13995-2|MTHFD2', 'ENSG00000065911|ENST00000394053|MTHFD2'] 26179 13770 FHSDPQHWL True PC9_epitope_Rep2 1165.53049202281 1165.52884490379 58.252 3 0.09330271560413782 0.0028694404591104736 0.9438714419765777 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 87967 10745 QVRDVIIAA True PC9_epitope_Rep4 983.5763795860698 983.57528993586 49.087 2 0.09330252850602586 0.0028694404591104736 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 129896 5050 VTLTSEEEAR True H1975_Epitope_Rep1 1133.5564319871298 1133.55532993586 24.496 2 0.09329376700515964 0.0028694404591104736 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 48417 15285 KEDPFVFIP True H1975_Epitope_Rep3 1090.5698972233 1090.5688099358601 64.202 2 0.09328984945264326 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 25849 18427 FGFVTFDDHD True PC9_epitope_Rep6 1198.4931034545798 1198.49200993586 83.524 2 0.09328888389081669 0.0028694404591104736 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 102022 6914 SPPIPLAK True H1975_Epitope_Rep3 821.50108938749 821.49998993586 31.555 2 0.09328461999285691 0.0028694404591104736 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 2001 4492 AEKRDPQELVA True H1975_Epitope_Rep3 1254.65681473474 1254.65515490379 22.398 3 0.0932834042761254 0.0028694404591104736 0.9438714419765777 ['ENST00000580601.5_1_17:73689468-73702598:+|nuORF', 'nc|ENSG00000161526|Q9UHR5-2|SAP30BP', 'ENSG00000161526|ENST00000584667|SAP30BP', 'ENST00000577292.5_1_17:73663452-73698652:+|nuORF'] 107015 22865 SYLLPGMASF True PC9_epitope_Rep5 1084.52631815916 1084.5252299358601 92.948 2 0.09328073102707718 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000168310|P14316-2|IRF2', 'ENSG00000168310|ENST00000393593|IRF2'] 59812 16117 LHDENILL True PC9_epitope_Rep1 965.51819600361 965.51708993586 66.81 2 0.09327850299913443 0.0028694404591104736 0.9438714419765777 ['ENSG00000103494|ENST00000647211|RPGRIP1L', 'nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L'] 96650 10316 SENPSVYVP True H1975_Epitope_Rep1 990.4658260775799 990.4652749679301 44.628 1 0.09327772687097217 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 95084 6409 RYSSM[Oxidation]AASF True PC9_epitope_Rep2 1034.44913084806 1034.4480299358602 30.06 2 0.09325858127638832 0.0028694404591104736 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 139867 19842 YVDPVITSI True PC9_epitope_Rep4 1005.53826274185 1005.53767496793 84.453 1 0.09325567733733686 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 102772 2536 SQEGRPVQV True PC9_epitope_Rep6 998.5145076054997 998.51340993586 14.686 2 0.09325234351887562 0.0028694404591104736 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 0 6118 AAAAAAAAAAA True PC9_epitope_Rep1 799.41881631551 799.41770993586 28.347 2 0.09325220397523834 0.0028694404591104736 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 7916 13060 ATDDITELY True H1975_Epitope_Rep1 1039.47097102767 1039.46986993586 55.321 2 0.09325032174717122 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 72486 11393 M[Oxidation]VAPAVASV True PC9_epitope_Rep4 859.4473399429099 859.44624993586 51.594 2 0.09324731417239884 0.0028694404591104736 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 1096 7769 AEAPPAYTP True H1975_Epitope_Rep3 915.4337976733101 915.43270993586 34.868 2 0.09324711037181324 0.0028694404591104736 0.9438714419765777 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 118108 20819 VATWVDETL True PC9_epitope_Rep3 1032.51277627 1032.51166993586 85.352 2 0.09324444282736392 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 1949 12260 AEIPEGYVP True H1975_Epitope_Rep2 973.47566248529 973.47511496793 52.242 1 0.09324434243210675 0.0028694404591104736 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 18769 12068 ELDPTNMTY True H1975_Epitope_Rep2 1082.45902644498 1082.45847496793 51.502 1 0.09324137047021762 0.0028694404591104736 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 31881 5325 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 25.555 2 0.09322696809661968 0.0028694404591104736 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 95852 11513 SDLLSRLV True H1975_Epitope_Rep3 901.5232813840499 901.52218993586 49.41 2 0.09321576999799525 0.0028694404591104736 0.9438714419765777 ['FRY|p.M2908Cfs*5|1|0.3|ENSG00000073910|chr13:32294509-32294509|A/-|frameshift_variant', 'ENSG00000073910|ENST00000542859|FRY'] 103925 11178 SRPENAIIY True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 47.88 2 0.09320210494879641 0.0028694404591104736 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 97823 12588 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 56.249 2 0.09320022764338447 0.0028694404591104736 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 43261 11820 IHDGLTVHL True PC9_epitope_Rep2 1003.54507945779 1003.5439899358599 50.795 2 0.09319870914021042 0.0028694404591104736 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 75012 22882 NMAELFAVV True PC9_epitope_Rep2 992.5001034113199 992.49900993586 93.512 2 0.0931962094732798 0.0028694404591104736 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000530983.5_1_8:145651064-145651211:-|nuORF', 'ENST00000526977.5_1_8:145650235-145651211:-|nuORF', 'ENST00000528142.5_1_8:145649272-145651551:-|nuORF'] 39843 10804 HQGPATTVAF True PC9_epitope_Rep1 1027.50869394907 1027.50758993586 46.444 2 0.09319138779692376 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 77196 19100 NYGQYFTLW True NCI_RA007_Epitope_Rep4 1190.53965972418 1190.53856993586 82.616 2 0.09318945988685387 0.0028694404591104736 0.9438714419765777 ['ENSG00000109929|ENST00000264027|SC5D'] 129833 20953 VTLGPVPEI True PC9_epitope_Rep3 923.53278343859 923.5322349679301 85.873 1 0.09318742367877923 0.0028694404591104736 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 102609 20056 SQAPFIVAL True PC9_epitope_Rep6 944.5331177917599 944.53202993586 89.812 2 0.09318649714151578 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 76712 11425 NTPEYMEKI True PC9_epitope_Rep4 1123.52196105471 1123.5208699358602 51.714 2 0.09316869494168041 0.0028694404591104736 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 15988 17643 EDYLSLILNR True NCI_RA007_Epitope_Rep1 1234.65575210558 1234.65464993586 72.763 2 0.09316599582610696 0.0028694404591104736 0.9438714419765777 ['CON__P02769'] 105937 14003 SVLEPPLFLK True NCI_RA007_Epitope_Rep3 1141.6746966450098 1141.67358993586 62.388 2 0.0931605246248305 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 67813 20790 LTIDDGIFEV True PC9_epitope_Rep6 1120.56520576568 1120.5641099358602 92.737 2 0.0931506877274706 0.0028694404591104736 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 95586 4989 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 26.789 2 0.09314863875789711 0.0028694404591104736 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 102436 10326 SPVYVGRVV True PC9_epitope_Rep6 974.5549158654999 974.55380993586 50.418 2 0.0931475644199582 0.0028694404591104736 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 97836 14074 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 59.149 2 0.09314465547785158 0.0028694404591104736 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 131634 13921 VWDTAGQEKF True PC9_epitope_Rep3 1179.5560380643099 1179.5549499358601 58.627 2 0.09313496246482134 0.0028694404591104736 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000537745.5_1_12:131357552-131357684:+|nuORF'] 112966 20097 TPSIPVLTA True PC9_epitope_Rep2 897.51713337445 897.51658496793 82.711 1 0.09313202503633257 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 647 10433 AATKILTEL True H1975_Epitope_Rep2 958.5698972233 958.56880993586 45.146 2 0.09313065357734235 0.0028694404591104736 0.9438714419765777 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'ENSG00000129680|ENST00000316077|MAP7D3'] 26055 13406 FHDMGGVQL True PC9_epitope_Rep6 1002.4593012284997 1002.4582099358599 63.241 2 0.0931303014021251 0.0028694404591104736 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 108232 8107 TEAGFPEQA True H1975_Epitope_Rep2 948.4188758851598 948.41776993586 36.132 2 0.0931284725517195 0.0028694404591104736 0.9438714419765777 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 85508 9232 QLIVGVNK True PC9_epitope_Rep3 869.53345214493 869.53234993586 40.452 2 0.0931182434209751 0.002893014633598292 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 115458 7731 TVFSHAQTV True PC9_epitope_Rep2 988.4977949121999 988.49668993586 35.112 2 0.09311721341289761 0.002893014633598292 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 21710 6957 ERYKEVAEL True PC9_epitope_Rep6 1135.5873381925899 1135.58624993586 35.712 2 0.0931169171114048 0.002893014633598292 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 5177 22253 ALPEIFTEL True PC9_epitope_Rep4 1031.55391280599 1031.55280993586 93.835 2 0.09311610108431005 0.002893014633598292 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 91828 12929 RPNDIMAEV True PC9_epitope_Rep2 1043.50697969691 1043.50588993586 55.026 2 0.09311332507556365 0.002893014633598292 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 52879 6524 KRFDDKYTL True PC9_epitope_Rep6 1184.6189726740397 1184.61733490379 33.766 3 0.0931096669886147 0.002893014633598292 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 47431 12773 IYIKQIKTF True PC9_epitope_Rep2 1152.6906810623198 1152.6890249037901 54.435 3 0.09310671283566088 0.002893014633598292 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 32013 6111 GETVPAPSA True H1975_Epitope_Rep2 827.40249754503 827.40194496793 28.485 1 0.09310079098119371 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 104390 3737 SSGPSTPLK True NCI_RA007_Epitope_Rep4 872.46034677432 872.45924993586 20.521 2 0.09308862374167565 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5'] 130409 10955 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 50.179 2 0.0930602647577313 0.002893014633598292 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 7519 13230 ASETGFLTY True H1975_Epitope_Rep1 987.4549270407099 987.4543749679301 55.987 1 0.09305876850757724 0.002893014633598292 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 29634 21976 FVLPILQKL True PC9_epitope_Rep2 1069.68995278633 1069.6888499358602 90.007 2 0.0930515889447674 0.002893014633598292 0.9438714419765777 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 48538 13027 KEFQLFQGV True NCI_RA007_Epitope_Rep3 1094.5760452328998 1094.57494993586 58.513 2 0.09304060857959481 0.002893014633598292 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'nc|ENSG00000068438|Q9UET6-2|FTSJ1'] 27408 5785 FNDPNAKEM True PC9_epitope_Rep6 1064.45969515132 1064.4585899358601 30.44 2 0.09303013604631065 0.002893014633598292 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 135769 7372 YENEVALR True PC9_epitope_Rep2 992.4927095317598 992.49160993586 33.738 2 0.09302889966509656 0.002893014633598292 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 31505 6234 GEEQPPQPP True H1975_Epitope_Rep3 977.4454249861699 977.44432993586 28.993 2 0.09302336278265455 0.002893014633598292 0.9438714419765777 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 58217 19913 LESSIAPIVIF True H1975_Epitope_Rep2 1187.6801759482698 1187.67906993586 82.581 2 0.09301976616345027 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000175792|Q9Y265-2|RUVBL1', 'ENSG00000175792|ENST00000322623|RUVBL1'] 104655 9676 SSYSGVTQL True H1975_Epitope_Rep2 940.4501760134401 940.44962496793 42.2 1 0.09301203770819692 0.002893014633598292 0.9438714419765777 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 114052 15804 TRNDYVMMY True PC9_epitope_Rep5 1191.50526544475 1191.50416993586 65.78 2 0.0930093379105637 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 54270 21577 KYPLNLYLL True PC9_epitope_Rep1 1135.66413196131 1135.66302993586 87.818 2 0.09300883220307883 0.002893014633598292 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 43281 14927 IHDGMNLEL True PC9_epitope_Rep6 1040.49608066004 1040.49498993586 69.414 2 0.09300295160299937 0.002893014633598292 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 130477 15050 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 69.932 2 0.09299565062128126 0.002893014633598292 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 53349 12346 KTSESSTILVV True PC9_epitope_Rep4 1162.64451871554 1162.64342993586 55.297 2 0.0929954088308519 0.002893014633598292 0.9438714419765777 ['ENSG00000203926|ENST00000370518|SPANXA2', 'ENSG00000198573|ENST00000358993|SPANXC', 'ENSG00000198021|ENST00000370519|SPANXA1', 'ENSG00000196406|ENST00000370515|SPANXD', 'ENSG00000227234|ENST00000449283|SPANXB1'] 104089 16197 SRVEAVYVL True PC9_epitope_Rep5 1034.5760452328998 1034.57494993586 67.293 2 0.09299466223262313 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000117115|Q9Y2J8-2|PADI2', 'ENSG00000117115|ENST00000375486|PADI2'] 72848 8811 NAMEDAQTL True NCI_RA007_Epitope_Rep3 991.42806066987 991.42696993586 41.749 2 0.09299425041995273 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000196975|P09525|ANXA4', 'ENSG00000196975|ENST00000394295|ANXA4'] 96808 13842 SESDYIVMP True H1975_Epitope_Rep1 1039.4532127885498 1039.4526749679299 58.389 1 0.09298591398321059 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'SCARB1|p.G128S|1|0.24|ENSG00000073060|chr12:124815017-124815017|C/T|missense_variant', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1'] 49414 16729 KILPTLEAV True PC9_epitope_Rep4 982.60628273202 982.60518993586 72.316 2 0.09298218294561852 0.002893014633598292 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 132802 9817 VYSRDPNYL True PC9_epitope_Rep2 1125.5454733806098 1125.54436993586 43.097 2 0.09298025950032272 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 109899 3961 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 21.456 2 0.09298000680888356 0.002893014633598292 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 31376 13087 GEAPVPVLP True H1975_Epitope_Rep2 877.4909186266099 877.49037496793 55.462 1 0.09296770436882922 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 139199 14966 YSVDIPLDK True PC9_epitope_Rep4 1048.54407639828 1048.5429699358601 65.505 2 0.09295110983061358 0.002893014633598292 0.9438714419765777 ['ENSG00000131469|ENST00000253788|RPL27'] 98855 23531 SIVDFLITA True PC9_epitope_Rep2 977.5433481222899 977.54279496793 95.987 1 0.09294787164612113 0.002893014633598292 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 118453 3111 VDQLTNDK True NCI_RA007_Epitope_Rep2 931.46107505031 931.45996993586 16.72 2 0.09294519653145922 0.002893014633598292 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'VIM|p.R170L|2|0.27|ENSG00000026025|chr10:17229931-17229931|G/T|missense_variant'] 126539 17942 VPPAVTGITFL True H1975_Epitope_Rep1 1113.64339651673 1113.6428749679299 74.752 1 0.09293879351713291 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 9167 14360 AVNPKFLAV True PC9_epitope_Rep4 957.5647522732099 957.56364993586 63.143 2 0.0929280026849593 0.002893014633598292 0.9438714419765777 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 98419 23468 SIIPPLFTV True PC9_epitope_Rep3 985.58481901145 985.58372993586 95.548 2 0.09292796207933722 0.002893014633598292 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 76580 6633 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.4608649679301 30.468 1 0.09292629271772983 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 116829 14657 TYMGHTGAVW True PC9_epitope_Rep3 1121.4964150132098 1121.4953099358602 61.514 2 0.09292443132486478 0.002893014633598292 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 16183 10018 EEEYPGITA True H1975_Epitope_Rep2 1007.4447562798298 1007.44364993586 43.525 2 0.09291497988071791 0.002893014633598292 0.9438714419765777 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 132621 13291 VYPSSLSKI True PC9_epitope_Rep3 992.5542471591599 992.55314993586 56.158 2 0.09291223502779572 0.002893014633598292 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 88438 5344 QYTHKIYHL True NCI_RA007_Epitope_Rep4 1201.6243924076498 1201.6227449037901 27.121 3 0.09291178349641736 0.002893014633598292 0.9438714419765777 ['PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion', 'ENSG00000174238|ENST00000313486|PITPNA', 'ENST00000471825.1_1_22:28306950-28315179:-|nuORF', 'ENST00000460566.5_1_22:28293057-28315179:-|nuORF', 'ENSG00000180957|ENST00000335272|PITPNB', 'nc|ENSG00000180957|P48739-2|PITPNB', 'nc|ENSG00000180957|P48739-3|PITPNB'] 84731 13109 QHGGFVVTV True PC9_epitope_Rep2 942.4923156089399 942.49120993586 55.699 2 0.0929078311446791 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 110373 21612 TILPAIILV True PC9_epitope_Rep6 951.63685458431 951.63574993586 96.009 2 0.092900033711027 0.002893014633598292 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 131517 20697 VVVGDLVEV True PC9_epitope_Rep2 927.5276980581499 927.5271449679301 85.047 1 0.09289911986534315 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 44809 4254 IPVEQKEGA True PC9_epitope_Rep5 969.5131106231698 969.51200993586 21.435 2 0.09289621288448338 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 10889 8714 DAQSAPLRV True PC9_epitope_Rep4 955.50869394907 955.50758993586 41.016 2 0.09289038672918531 0.002893014633598292 0.9438714419765777 ['CON__P02754'] 1134 7710 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.45342993586 34.64 2 0.09288921887419423 0.002893014633598292 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 76077 7056 NRMDGTYAC True PC9_epitope_Rep5 1029.4008003762099 1029.39970993586 32.109 2 0.09288909776424933 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 8119 12111 ATESVSLYY True H1975_Epitope_Rep1 1031.48114178855 1031.48057496793 51.599 1 0.09288781464486369 0.002893014633598292 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 107947 21070 TAYDNFVEL True PC9_epitope_Rep2 1070.49204082542 1070.49147496793 86.502 1 0.09288514786083511 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 105630 11758 SVFESLIAK True NCI_RA007_Epitope_Rep3 992.5542471591598 992.55314993586 53.36 2 0.0928837260554987 0.002893014633598292 0.9438714419765777 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 39600 11214 HPLLGVSA True PC9_epitope_Rep1 792.4493881678001 792.4488349679301 48.015 1 0.09286730459837687 0.002893014633598292 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 26279 18551 FIDDANYSV True PC9_epitope_Rep3 1042.4607406971402 1042.4596499358602 76.575 2 0.09286626906354717 0.002893014633598292 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 96806 15036 SESDVIIIP True H1975_Epitope_Rep2 971.5175272972699 971.5169749679301 62.988 1 0.09286377639025932 0.002893014633598292 0.9438714419765777 ['ENSG00000154845|ENST00000400556|PPP4R1', 'PPP4R1|p.Y898Ffs*24|1|0.26|ENSG00000154845|chr18:9547948-9547949|AT/-|frameshift_variant', 'PPP4R1|p.R256Dfs*44|1|0.35|ENSG00000154845|chr18:9583270-9583270|G/-|frameshift_variant', 'PPP4R1|p.S412Qfs*37|2|0.3|ENSG00000154845|chr18:9570496-9570496|A/-|frameshift_variant', 'PPP4R1|p.L621Tfs*25|1|0.24|ENSG00000154845|chr18:9559559-9559586|CAGTCATAGATAAATACTGATCTAACAA/-|frameshift_variant', 'ENST00000580283.1_1_18:9594966-9614260:-|nuORF', 'PPP4R1|p.L133Pfs*6|1|0.25|ENSG00000154845|chr18:9588751-9588752|-/G|frameshift_variant'] 73900 8503 NHHMQSISF True PC9_epitope_Rep2 1099.4869129586702 1099.48580993586 38.072 2 0.0928635730981924 0.002893014633598292 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 104654 9481 SSYSGVTQL True H1975_Epitope_Rep2 940.4501760134401 940.44962496793 41.437 1 0.09285533034840351 0.002893014633598292 0.9438714419765777 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 118827 11597 VEEGFSIQA True H1975_Epitope_Rep2 978.4658260775799 978.46472993586 49.674 2 0.09284621877423622 0.002921020110099989 0.9438714419765777 ['ENSG00000172409|ENST00000533682|CLP1'] 120416 17471 VFTEVANLF True NCI_RA007_Epitope_Rep3 1038.53859709502 1038.53750993586 76.651 2 0.0928447140888498 0.002943237561317449 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 59110 15086 LGEHNIDVLE True PC9_epitope_Rep5 1137.56660274801 1137.56550993586 63.035 2 0.09284348551586206 0.002943237561317449 0.9438714419765777 ['CON__P00761'] 14868 11298 DYFEQYGK True PC9_epitope_Rep6 1048.4501760134401 1048.44906993586 54.474 2 0.09284094697096121 0.002943237561317449 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 86784 14618 QRMTTQLLL True PC9_epitope_Rep6 1102.6168644990598 1102.61576993586 68.143 2 0.09281500559296958 0.002943237561317449 0.9438714419765777 ['ENSG00000110195|ENST00000393676|FOLR1'] 44913 19847 IQDRVLYVL True PC9_epitope_Rep5 1117.64954452633 1117.64844993586 81.39 2 0.09280706590971739 0.002943237561317449 0.9438714419765777 ['ENSG00000004779|ENST00000007516|NDUFAB1'] 74536 18942 NLAEKLIGV True PC9_epitope_Rep2 955.5702315764698 955.56912993586 78.224 2 0.09279915566151761 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 14078 13492 DSDMQTLVY True H1975_Epitope_Rep2 1070.45902644498 1070.45847496793 57.03 1 0.09277726431711368 0.002943237561317449 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 140518 20582 YYITGNLETF True PC9_epitope_Rep4 1219.57610480255 1219.5750099358602 87.321 2 0.0927772102608527 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 27662 8347 FQDDPHAGL True PC9_epitope_Rep6 998.4457593393398 998.44466993586 41.758 2 0.09276740661790212 0.002943237561317449 0.9438714419765777 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 36641 20234 GVLPNIQAV True PC9_epitope_Rep2 909.5283667644899 909.52781496793 83.248 1 0.09276489322971329 0.002943237561317449 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 137182 14478 YLDSIPPGQYM True H1975_Epitope_Rep2 1282.5903749677 1282.58926993586 60.846 2 0.09275915265273259 0.002943237561317449 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 67376 14176 LTDTFTAYY True H1975_Epitope_Rep3 1093.49679185269 1093.49627496793 59.863 1 0.09275003730484636 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 91257 14286 RLTPKLMEV True PC9_epitope_Rep5 1085.6267009067699 1085.6256099358602 59.955 2 0.09274622975687635 0.002943237561317449 0.9438714419765777 ['RAD21-EIF3H|4|fusion', 'RAD21-EIF3H|2|fusion', 'RAD21-EIF3H|1|fusion', 'RAD21-EIF3H|3|fusion', 'EIF3H|p.K178R|1|0.38|ENSG00000147677|chr8:116657239-116657239|T/C|missense_variant', 'ENSG00000147677|ENST00000521861|EIF3H', 'EIF3H|p.E217Nfs*30|1|0.19|ENSG00000147677|chr8:116655914-116655914|C/-|frameshift_variant'] 137409 21456 YLLPAIVHI True PC9_epitope_Rep5 1037.62735252977 1037.6262499358602 87.576 2 0.09274042237891494 0.002943237561317449 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 17428 13873 EHFPQAYSV True PC9_epitope_Rep1 1076.49270953176 1076.4916099358602 58.203 2 0.092739658008961 0.002943237561317449 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 101874 9217 SPLFSQHTA True PC9_epitope_Rep1 986.48214484806 986.48104993586 40.305 2 0.09273634673302142 0.002943237561317449 0.9438714419765777 ['ENSG00000167721|ENST00000301364|TSR1'] 130939 20911 VVINFDFPKL True PC9_epitope_Rep4 1190.6699456177398 1190.6688499358602 88.594 2 0.0927347094309432 0.002943237561317449 0.9438714419765777 ['ENSG00000110367|ENST00000534980|DDX6'] 111042 15582 TLDPQTGLFY True H1975_Epitope_Rep3 1153.5655401188499 1153.56444993586 65.353 2 0.09273126101817321 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000531641.1_1_11:76237526-76255878:+|nuORF'] 110184 15890 TIDPSNPMV True PC9_epitope_Rep1 972.45863252216 972.45752993586 65.931 2 0.09272842367233258 0.002943237561317449 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 69060 11431 LVIITAGAR True PC9_epitope_Rep2 912.5756513100799 912.57454993586 49.289 2 0.09272184556857846 0.002943237561317449 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 8564 18011 AVAAVLTQV True PC9_epitope_Rep2 870.5174677276199 870.51636993586 74.585 2 0.09270896646043496 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 59590 4533 LGSALRPSTSR True NCI_RA007_Epitope_Rep2 1143.6360197205101 1143.6343649037901 22.26 3 0.09270210695471937 0.002943237561317449 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 105567 13700 SVDSQILYY True H1975_Epitope_Rep3 1086.5233409537 1086.5222499358601 57.991 2 0.09269892203249007 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 97622 19316 SHALVTLTL True PC9_epitope_Rep3 953.5545815123301 953.55348993586 79.521 2 0.09269776599513938 0.002943237561317449 0.9438714419765777 ['ENST00000531423.1_1_8:145696018-145698106:+|nuORF', 'ENSG00000167702|ENST00000645548|KIFC2', 'nc|ENSG00000167702|Q96AC6|KIFC2'] 39723 8920 HPVLLTEA True PC9_epitope_Rep6 878.4861675993401 878.48561496793 44.284 1 0.09269735933269348 0.002943237561317449 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'POTEF|p.E799K|1|0.23|ENSG00000196604|chr2:130075077-130075077|C/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 106071 19382 SVLVSVSEV True PC9_epitope_Rep3 917.50696261357 917.50641496793 79.776 1 0.09269340098976546 0.002943237561317449 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 3238 6271 AGFAGDDAPR True PC9_epitope_Rep1 975.4410083120698 975.43990993586 28.935 2 0.09269112029134435 0.002943237561317449 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 53751 11482 KYFDEHYEY True PC9_epitope_Rep2 1292.53496826656 1292.5338699358601 49.485 2 0.09268743963741422 0.002943237561317449 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 112829 6148 TPMGPGRTV True PC9_epitope_Rep1 914.46438660894 914.46328993586 28.463 2 0.09268641851569234 0.002943237561317449 0.9438714419765777 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 91547 19641 RPAGALVALVV True PC9_epitope_Rep2 1064.67061432408 1064.66950993586 80.934 2 0.09267514209641858 0.002943237561317449 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 2190 11838 AENELGVVVA True H1975_Epitope_Rep2 999.5236753068698 999.52256993586 50.611 2 0.09266265050982393 0.002943237561317449 0.9438714419765777 ['ENSG00000171311|ENST00000370902|EXOSC1'] 140843 15176 YYTDIM[Oxidation]HTL True PC9_epitope_Rep1 1171.5219614351497 1171.5208699358602 63.195 2 0.09266251691838259 0.002943237561317449 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 84617 5928 QHDPSAVAV True PC9_epitope_Rep5 922.4508447197799 922.44974993586 27.797 2 0.09266037708922674 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 77608 21238 NYTLYPITF True PC9_epitope_Rep4 1130.56481184286 1130.56370993586 89.857 2 0.09266013662234375 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000151233|Q4G148-2|GXYLT1', 'ENSG00000151233|ENST00000398675|GXYLT1'] 96542 11905 SELPGAFEA True H1975_Epitope_Rep3 919.4287122928699 919.42816496793 50.945 1 0.09266009825268427 0.002943237561317449 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 74047 13285 NHSGAVVLL True PC9_epitope_Rep3 908.50796567308 908.50686993586 56.136 2 0.09265695066402134 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 106551 22225 SVVTSIFGV True PC9_epitope_Rep2 907.5014833103099 907.50038993586 90.967 2 0.09265288622872489 0.002943237561317449 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 47458 20861 IYIWDLNNF True NCI_RA007_Epitope_Rep2 1196.5866099165999 1196.58550993586 86.279 2 0.09264459476173878 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 119648 7991 VESGVPQPP True H1975_Epitope_Rep2 908.4603467743198 908.45924993586 35.686 2 0.09264339496221301 0.002943237561317449 0.9438714419765777 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 97600 15369 SHADVVNLL True PC9_epitope_Rep4 966.51344497634 966.51234993586 67.049 2 0.09264237153989706 0.002943237561317449 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 39935 10075 HQNQLLSSL True NCI_RA007_Epitope_Rep4 1038.5458077337798 1038.54470993586 45.598 2 0.09264056325441987 0.002943237561317449 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 64577 8946 LRDQSAVVV True PC9_epitope_Rep5 985.5556441414899 985.55454993586 39.354 2 0.09264022614778948 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I', 'nc|ENSG00000196275|Q86UP8-2|GTF2IRD2', 'nc|ENSG00000174428|Q6EKJ0-2|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-5|GTF2IRD2', 'ENSG00000196275|ENST00000451013|GTF2IRD2', 'ENSG00000174428|ENST00000472837|GTF2IRD2B', 'nc|ENSG00000196275|Q86UP8-3|GTF2IRD2', 'ENST00000457594.2_7:74237150-74267816:-|nuORF'] 75840 11512 NRDLATPVM True PC9_epitope_Rep1 1015.51206507735 1015.51096993586 49.16 2 0.09263041900763341 0.002943237561317449 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 89065 8617 REELSNVLA True H1975_Epitope_Rep3 1029.5454733806098 1029.54436993586 38.139 2 0.09262934598190964 0.002943237561317449 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36'] 5792 12892 APFDLFENK True H1975_Epitope_Rep1 1079.52876068731 1079.52766993586 54.66 2 0.09262599082254667 0.002943237561317449 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P'] 1802 12581 AEIDAHLVALA True H1975_Epitope_Rep2 1121.60807363717 1121.6069699358602 53.488 2 0.09262144992893588 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 54144 17828 KYNANFVTF True PC9_epitope_Rep5 1102.54474510462 1102.5441749679298 73.595 1 0.09261813659852035 0.002943237561317449 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 32597 10114 GHDASQITL True PC9_epitope_Rep3 940.46140940348 940.46030993586 43.854 2 0.09261797682839772 0.002943237561317449 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 102417 14146 SPVVPQISA True PC9_epitope_Rep6 896.4967322830399 896.49562993586 66.284 2 0.09261596895925318 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 2403 10766 AEQLAKWIA True H1975_Epitope_Rep1 1028.5654805491997 1028.5643899358602 46.373 2 0.0926085376952277 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 102819 20929 SQFPGAITL True PC9_epitope_Rep3 932.4967322830399 932.49618496793 85.781 1 0.09260478217588149 0.002943237561317449 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 105899 23354 SVLDGLLYV True PC9_epitope_Rep2 977.54334812229 977.54279496793 95.305 1 0.09260275606412692 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 138177 20203 YQNYIMEGV True PC9_epitope_Rep1 1115.49574630687 1115.49464993586 82.54 2 0.09260078938254293 0.002943237561317449 0.9438714419765777 ['ENSG00000124226|ENST00000244061|RNF114', 'nc|ENSG00000124226|Q9Y508-2|RNF114'] 77023 23180 NVVEALIAL True PC9_epitope_Rep5 940.5593325395998 940.55822993586 94.143 2 0.09259577168021063 0.002943237561317449 0.9438714419765777 ['ENSG00000242028|ENST00000442995|HYPK', 'ENST00000458412.1_2_15:44093902-44094001:+|nuORF'] 71384 10377 MIDVTKSYY True H1975_Epitope_Rep2 1118.5317974624202 1118.5307099358602 44.926 2 0.09256917163187847 0.002943237561317449 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF'] 82399 19847 PVAEYFSGV True PC9_epitope_Rep2 967.4650978015899 967.46400993586 81.734 2 0.09256675972291988 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 44940 10342 IQESNFDRV True PC9_epitope_Rep5 1106.5356369729 1106.53452993586 44.765 2 0.09256627214709164 0.002943237561317449 0.9438714419765777 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 42000 6781 IEDLSQQA True H1975_Epitope_Rep3 902.4345259493001 902.43397496793 31.037 1 0.09256577692663416 0.002943237561317449 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA'] 23822 17524 EYLKVDAQF True PC9_epitope_Rep5 1111.5549754351498 1111.5538699358601 72.412 2 0.09255177209420352 0.002943237561317449 0.9438714419765777 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF', 'ENST00000466052.1_1_1:33256818-33263474:-|nuORF', 'ENST00000470377.1_1_1:33256708-33272178:-|nuORF'] 102415 15999 SPVVPQISA True PC9_epitope_Rep5 896.4967322830399 896.49562993586 66.53 2 0.09255116463523624 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 93992 11019 RVPKTLVLV True PC9_epitope_Rep6 1023.6804507317898 1023.6793499358599 53.284 2 0.09254904950053082 0.002943237561317449 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 60523 23636 LIPEYLNFI True PC9_epitope_Rep1 1120.61684741572 1120.61574993586 95.71 2 0.09254819847878935 0.002943237561317449 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 25354 14790 FEGIVTDLIR True NCI_RA007_Epitope_Rep1 1161.63937376545 1161.63826993586 61.588 2 0.09254500660464195 0.002943237561317449 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 38103 7465 HENVSVIP True H1975_Epitope_Rep2 893.4606811274899 893.45958993586 33.661 2 0.09253453784287737 0.002943237561317449 0.9438714419765777 ['ENST00000551440.1_1_12:100594629-100598862:+|nuORF', 'ENST00000550813.5_1_12:100594629-100599999:+|nuORF', 'nc|ENSG00000075089|Q9GZN1-2|ACTR6', 'ENSG00000075089|ENST00000188312|ACTR6'] 45419 5486 ISDSEGFK True PC9_epitope_Rep3 881.4130622287299 881.41196993586 26.176 2 0.09253363881734268 0.002943237561317449 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 12647 9112 DLEIATYR True H1975_Epitope_Rep1 979.4974605590301 979.49691496793 39.954 1 0.0925237345234565 0.002943237561317449 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 120442 11556 VFTSRSAAF True PC9_epitope_Rep3 984.5028802926398 984.50178993586 49.464 2 0.09251260041960009 0.002943237561317449 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 109771 12267 THISDTSVVL True PC9_epitope_Rep4 1070.56078909158 1070.5596899358602 55.002 2 0.09250371391173992 0.002943237561317449 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 35830 5666 GTYVSSVPR True NCI_RA007_Epitope_Rep4 964.4977949121999 964.49668993586 28.4 2 0.09250031538051992 0.002943237561317449 0.9438714419765777 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 96252 8791 SEEPGAPLP True H1975_Epitope_Rep3 895.4287122928699 895.42816496793 38.821 1 0.09249067079439198 0.002943237561317449 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 95121 7936 RYVPRASYF True NCI_RA007_Epitope_Rep4 1157.5981776598098 1157.5970899358601 37.268 2 0.09248865685944756 0.002943237561317449 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 1964 5527 AEIRAINEA True H1975_Epitope_Rep2 985.51925863277 985.51816993586 26.267 2 0.0924822789882704 0.00297118511043839 0.9438714419765777 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 107096 21781 SYMFVDENTF True PC9_epitope_Rep5 1251.5117902938298 1251.51068993586 88.812 2 0.0924771907443671 0.0029943471203895448 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 72073 8424 MRDGHYTTF True PC9_epitope_Rep5 1126.4865786055 1126.48492490379 37.343 3 0.0924706785037725 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11'] 97839 11245 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 54.251 2 0.09246501407560169 0.0029943471203895448 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 27187 17474 FLSQPILL True H1975_Epitope_Rep2 929.5586042636099 929.55805496793 72.505 1 0.09245832500469611 0.0029943471203895448 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 40011 7095 HQSSVGSVL True PC9_epitope_Rep2 912.46649478392 912.46538993586 32.69 2 0.09244305855011137 0.0029943471203895448 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 19961 14891 EMDSPILGDY True H1975_Epitope_Rep1 1138.4852411928198 1138.48467496793 62.515 1 0.09244012505540829 0.0029943471203895448 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 133283 11522 WELGQVHPP True H1975_Epitope_Rep2 1061.52942939365 1061.52832993586 49.377 2 0.09243954574913352 0.0029943471203895448 0.9438714419765777 ['ENST00000573236.5_1_16:4393478-4393541:-|nuORF', 'ENST00000573450.5_1_16:4391489-4393601:-|nuORF'] 44869 20284 IQALISGIEA True PC9_epitope_Rep2 1013.57571087973 1013.57517496793 83.444 1 0.09243904550277002 0.0029943471203895448 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 95673 6376 SAVTSVAKV True PC9_epitope_Rep4 860.4967322830399 860.49562993586 31.611 2 0.09243862854491783 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27', 'IFI27|p.S8L|1|0.19|ENSG00000165949|chr14:94111705-94111705|C/T|missense_variant'] 9388 9679 AVVGAIKNV True PC9_epitope_Rep5 869.5334521449299 869.53234993586 42.199 2 0.09243710308228661 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 89701 11652 REYMGFIQA True NCI_RA007_Epitope_Rep4 1113.5277151414898 1113.52660993586 51.776 2 0.09242265427239228 0.0029943471203895448 0.9438714419765777 ['ENSG00000197976|ENST00000313871|AKAP17A', 'nc|ENSG00000292343|Q02040-2|AKAP17A', 'nc|ENSG00000292343|Q02040-3|AKAP17A'] 58676 15452 LFIATSQKF True PC9_epitope_Rep4 1053.58588164061 1053.58478993586 67.367 2 0.0924178957684369 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 92153 7723 RQASPNIVI True NCI_RA007_Epitope_Rep3 996.5716285588 996.57052993586 37.501 2 0.09241748611348881 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000144566|P20339-2|RAB5A', 'ENSG00000144566|ENST00000273047|RAB5A', 'ENSG00000108774|ENST00000346213|RAB5C', 'nc|ENSG00000108774|P51148-2|RAB5C', 'ENST00000469122.5_1_3:19992498-20019915:+|nuORF', 'ENST00000473608.1_1_3:20017064-20025312:+|nuORF'] 105534 3117 SVDPKNYPK True NCI_RA007_Epitope_Rep2 1046.53965972418 1046.53856993586 16.745 2 0.09241680689084143 0.0029943471203895448 0.9438714419765777 ['ENST00000491056.5_1_2:113587940-113590763:-|nuORF', 'ENSG00000125538|ENST00000263341|IL1B'] 69442 5682 LVRPPTEQA True PC9_epitope_Rep4 1009.55564414149 1009.55454993586 28.664 2 0.09241661734203949 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 113448 14679 TQPGTGWVQF True NCI_RA007_Epitope_Rep3 1119.5349086969097 1119.53380993586 65.122 2 0.09241482253594241 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000157191|Q9NVZ3-4|NECAP2', 'ENSG00000157191|ENST00000337132|NECAP2'] 101016 8452 SLTGHISTV True PC9_epitope_Rep4 913.4868958753301 913.48578993586 39.975 2 0.09240322487377846 0.0029943471203895448 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 53892 15408 KYIEGVSDF True PC9_epitope_Rep5 1056.51277627 1056.51166993586 64.276 2 0.09239214407406914 0.0029943471203895448 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 93901 9010 RVIEGDVVSA True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 40.008 2 0.09239014103894991 0.0029943471203895448 0.9438714419765777 ['ENSG00000169756|ENST00000544547|LIMS1', 'ENST00000603767.1_1_2:111195993-111209584:-|nuORF', 'nc|ENSG00000169756|P48059|LIMS1', 'nc|ENSG00000169756|P48059-4|LIMS1', 'nc|ENSG00000169756|P48059-5|LIMS1', 'nc|ENSG00000169756|P48059-3|LIMS1', 'ENSG00000256977|ENST00000480744|LIMS3', 'ENSG00000256671|ENST00000632897|LIMS4'] 111333 23829 TLIEDILGV True PC9_epitope_Rep2 971.5539128059899 971.55280993586 97.129 2 0.0923881477071656 0.0029943471203895448 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 84900 13787 QHSITPLAL True PC9_epitope_Rep6 978.5498304850599 978.54872993586 64.832 2 0.09238169978506824 0.0029943471203895448 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 96681 7058 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.4183249679301 32.113 1 0.09237578587991274 0.0029943471203895448 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 91490 4930 RNVSTGDVNVE True NCI_RA007_Epitope_Rep4 1188.5734790335998 1188.5723899358602 25.426 2 0.0923747735044294 0.0029943471203895448 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 89596 6281 RESNNMVVP True NCI_RA007_Epitope_Rep4 1044.5022286696399 1044.50112993586 30.763 2 0.09237142002772752 0.0029943471203895448 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000589947.7_1_19:19459550-19465349:+|nuORF'] 91051 19324 RLLDLENIQI True PC9_epitope_Rep6 1225.70303665117 1225.70192993586 86.979 2 0.09236993047800976 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'AOAH-ELMO1|1|fusion', 'AOAH-ELMO1|2|fusion', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1', 'ENST00000487843.1_1_7:36895158-37025590:-|nuORF', 'nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 119142 10278 VEINENLPA True H1975_Epitope_Rep1 997.5080252427299 997.50692993586 44.479 2 0.09232940460118308 0.0029943471203895448 0.9438714419765777 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF', 'ENST00000317633.13_2_5:70196496-70197687:+|nuORF'] 128695 15962 VSNPVDILTY True H1975_Epitope_Rep1 1119.58119018299 1119.58067496793 66.71 1 0.09232277711126012 0.0029943471203895448 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 85137 10061 QITQINHGL True PC9_epitope_Rep5 1022.5508931142199 1022.5497899358601 43.679 2 0.09232205890867339 0.0029943471203895448 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 105396 8563 SVADTVARV True PC9_epitope_Rep6 916.4977949121999 916.49668993586 42.709 2 0.09231564139697579 0.0029943471203895448 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 81240 7828 PPPAPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 37.518 2 0.09231544714149902 0.0029943471203895448 0.9438714419765777 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'BOD1L1|p.V1300*|1|0.17|ENSG00000038219|chr4:13603002-13603002|C/-|frameshift_variant', 'ENST00000302913.8_1_7:100488489-100488690:-|nuORF', 'ENST00000480400.1_1_2:175446032-175450310:-|nuORF', 'nc|ENSG00000162105|Q9UPX8-4|SHANK2', 'nc|ENSG00000162105|Q9UPX8-1|SHANK2', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000038219|ENST00000040738|BOD1L1', 'ENSG00000162105|ENST00000601538|SHANK2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENSG00000271601|ENST00000604000|LIX1L'] 38889 15625 HIIENIVAV True PC9_epitope_Rep6 1006.58113061334 1006.58002993586 72.304 2 0.09231525852227894 0.0029943471203895448 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 28077 7972 FRDQNPEQL True PC9_epitope_Rep4 1145.5465360097699 1145.54542993586 38.11 2 0.09231468362291419 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 1804 10899 AEIDAITAP True H1975_Epitope_Rep1 899.46001242115 899.4594649679301 46.885 1 0.09231359677523615 0.0029943471203895448 0.9438714419765777 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENST00000533707.1_1_11:47774435-47776097:-|nuORF'] 2069 6514 AELGLTRAA True H1975_Epitope_Rep3 900.5028802926399 900.50178993586 30.026 2 0.09231229281320469 0.0029943471203895448 0.9438714419765777 ['ENSG00000148331|ENST00000277458|ASB6', 'nc|ENSG00000148331|Q9NWX5-2|ASB6'] 34662 23106 GQLDFSEFL True PC9_epitope_Rep2 1054.49712620586 1054.4960299358602 94.368 2 0.09231192457008221 0.0029943471203895448 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 105951 19758 SVLGAITSV True PC9_epitope_Rep4 845.48583324617 845.48528496793 84.123 1 0.0923058496041184 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 31940 7534 GESAEVLSA True H1975_Epitope_Rep2 861.40797684829 861.4074249679301 33.931 1 0.09229169775803618 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 655 13996 AATSLITTL True H1975_Epitope_Rep2 889.5120479940101 889.51149496793 58.985 1 0.09229058792761842 0.0029943471203895448 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 130495 11522 VTVSDLQHV True PC9_epitope_Rep6 996.5240096600402 996.52290993586 55.404 2 0.09229029488759505 0.0029943471203895448 0.9438714419765777 ['ENSG00000068489|ENST00000262293|PRR11'] 29063 20401 FTPDVKVWEV True PC9_epitope_Rep5 1218.62847472858 1218.62736993586 83.51 2 0.09228937487353088 0.0029943471203895448 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF'] 88403 21633 QYPVYWDHLEF True PC9_epitope_Rep3 1495.67721582615 1495.67610993586 88.51 2 0.09228858844672146 0.0029943471203895448 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21'] 89547 3547 RERRDNYVP True NCI_RA007_Epitope_Rep4 1203.6108676018298 1203.60922490379 19.657 3 0.09228594806321277 0.0029943471203895448 0.9438714419765777 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 38534 3835 HHEAGVTAL True PC9_epitope_Rep4 933.4668291370899 933.4657299358599 20.921 2 0.09228268497987865 0.0029943471203895448 0.9438714419765777 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 70362 13157 LYQDGVFKF True NCI_RA007_Epitope_Rep3 1115.56514619603 1115.56404993586 59.026 2 0.0922771802214938 0.0029943471203895448 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 40277 12004 HRNGGLITL True PC9_epitope_Rep5 979.55631284783 979.55520993586 51.167 2 0.09227393617973935 0.0029943471203895448 0.9438714419765777 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 72053 15566 MRAFADAL True PC9_epitope_Rep5 893.4429228883698 893.44182993586 64.884 2 0.09227190328633146 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 65258 11785 LSEGVTISY True H1975_Epitope_Rep2 967.4862271689901 967.48512993586 50.405 2 0.09226955625171948 0.0029943471203895448 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 38877 18748 HIIENIVAV True PC9_epitope_Rep3 1006.58113061334 1006.58002993586 77.335 2 0.09226292785440483 0.0029943471203895448 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 74382 18128 NITDKGIIAL True PC9_epitope_Rep2 1056.6179100448799 1056.6168099358601 75.031 2 0.09226261687651888 0.0029943471203895448 0.9438714419765777 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 132565 19523 VYPLMKEYF True PC9_epitope_Rep4 1188.5889184157197 1188.58782993586 83.214 2 0.09225975207083398 0.0029943471203895448 0.9438714419765777 ['ENSG00000100109|ENST00000407690|TFIP11'] 79271 9188 PGHLQEGF True PC9_epitope_Rep5 883.41881631551 883.41770993586 40.286 2 0.09224495993451742 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 17308 11693 EHDPHVLLAV True PC9_epitope_Rep6 1128.5927579262 1128.59110490379 56.11 3 0.09224390626022724 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 3934 8169 AHDSSEYAI True PC9_epitope_Rep5 991.42468954159 991.42358993586 36.363 2 0.0922373778508133 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 88994 3648 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 19.063 2 0.09223647503522428 0.0029943471203895448 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 23909 23060 EYNAFFYSL True PC9_epitope_Rep1 1152.51277627 1152.51166993586 93.501 2 0.09223067458295488 0.0029943471203895448 0.9438714419765777 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3', 'ENST00000491292.5_1_2:128018779-128018920:-|nuORF'] 99920 23770 SLIDIVTEI True PC9_epitope_Rep5 1001.56447748969 1001.56338993586 96.413 2 0.09222914074802202 0.0029943471203895448 0.9438714419765777 ['ENSG00000068745|ENST00000328631|IP6K2'] 41999 6785 IEDLSQQA True H1975_Epitope_Rep2 902.4345259493001 902.43397496793 31.014 1 0.09222889311719905 0.0029943471203895448 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA'] 96298 7858 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 35.172 1 0.09222806761967191 0.0029943471203895448 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 103815 7103 SRGPTPPAM True PC9_epitope_Rep3 912.4487365447999 912.44762993586 32.33 2 0.09221850892640104 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1', 'ENST00000527764.1_1_1:36622018-36637187:+|nuORF'] 38491 4595 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 23.043 2 0.09221294283361756 0.0030031700127912796 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 60167 13587 LHYPSTTAL True PC9_epitope_Rep3 1001.51819600361 1001.51708993586 57.32 2 0.09220071764650013 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 108380 8921 TEDVGVVC True H1975_Epitope_Rep2 820.36366950816 820.36312496793 39.276 1 0.09218737267971308 0.0030031700127912796 0.9438714419765777 ['ENSG00000134013|ENST00000389131|LOXL2'] 29637 20097 FVLPILQKL True PC9_epitope_Rep6 1069.68995278633 1069.6888499358602 89.979 2 0.09218329740512848 0.0030031700127912796 0.9438714419765777 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 10 4834 AAAAAAAAAAA True PC9_epitope_Rep6 799.41881631551 799.41770993586 26.101 2 0.09217942932100573 0.0030031700127912796 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 61875 13756 LLLEVISGER True NCI_RA007_Epitope_Rep2 1127.65502382959 1127.65392993586 58.154 2 0.09217860959515109 0.0030031700127912796 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 139677 22277 YTTDFIYQL True PC9_epitope_Rep5 1162.55464108198 1162.5540749679299 90.695 1 0.09217808856457904 0.0030031700127912796 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 127627 7063 VRDKSYLL True PC9_epitope_Rep4 992.5654805492 992.56438993586 34.434 2 0.09215621567689437 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000117602|Q9UKA8-5|RCAN3', 'ENSG00000117602|ENST00000374395|RCAN3', 'nc|ENSG00000117602|Q9UKA8-6|RCAN3'] 37726 8843 HASDRIIAL True PC9_epitope_Rep6 994.5559784946599 994.55488993586 43.948 2 0.09215051833191142 0.0030031700127912796 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 131757 10136 VYADQPHIF True NCI_RA007_Epitope_Rep3 1088.52909504048 1088.5279899358602 46.959 2 0.09214888148814548 0.0030031700127912796 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 44986 13692 IQIM[Oxidation]KVEEI True PC9_epitope_Rep2 1117.60529713629 1117.6041899358602 57.956 2 0.09214706327143841 0.0030031700127912796 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000401937.3_1_1:33445851-33446070:+|nuORF'] 1959 10610 AEIQGVIDA True H1975_Epitope_Rep1 914.4709114580199 914.4703649679301 45.765 1 0.09214047557224715 0.0030031700127912796 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 113795 9273 TRDSNIIRL True PC9_epitope_Rep2 1086.61455599994 1086.6134499358602 41.009 2 0.09214040746126156 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS'] 31002 16775 GATSLVTLL True H1975_Epitope_Rep3 873.51713337445 873.51658496793 70.071 1 0.09213992193436468 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF', 'ENSG00000227507|ENST00000429299|LTB'] 76156 7563 NRSDPVTL True PC9_epitope_Rep2 900.46649478392 900.46538993586 34.46 2 0.09213642529584465 0.0030031700127912796 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 17895 5083 EIDKNDHLY True H1975_Epitope_Rep3 1145.53530261973 1145.53366490379 24.668 3 0.09213046602126888 0.0030031700127912796 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 88343 15733 QYLRVETQF True PC9_epitope_Rep2 1182.6033226099 1182.6022299358601 65.788 2 0.09212751274144408 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 120337 14066 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 65.977 2 0.0921270880372245 0.0030031700127912796 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 49458 9105 KITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep2 1246.62273800457 1246.6216499358602 40.022 2 0.09212593148208854 0.0030031700127912796 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 127094 14045 VQAPRLAAL True PC9_epitope_Rep2 937.5709002828098 937.56980993586 59.304 2 0.09212379761365758 0.0030031700127912796 0.9438714419765777 ['ENSG00000033100|ENST00000035307|CHPF2', 'nc|ENSG00000033100|Q9P2E5-2|CHPF2', 'CHPF2|p.Y186N|1|0.45|ENSG00000033100|chr7:151235340-151235340|T/A|missense_variant'] 27746 9811 FQDRPVSSL True PC9_epitope_Rep4 1047.53490869691 1047.53380993586 45.38 2 0.09211662443806475 0.0030031700127912796 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 47663 10461 IYPPKLHQF True PC9_epitope_Rep6 1141.62841515893 1141.62676490379 50.992 3 0.09211413334210464 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 83072 15159 PYMAKFVVF True NCI_RA007_Epitope_Rep4 1100.5728744287599 1100.5717699358602 65.897 2 0.09210960185902929 0.0030031700127912796 0.9438714419765777 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant', 'CAMK2D-ANK2|1|fusion', 'CAMK2D-ANK2|2|fusion', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3'] 124643 20799 VLIENVASL True PC9_epitope_Rep5 956.5542471591599 956.55314993586 85.052 2 0.09210792755398432 0.0030031700127912796 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 40818 16406 HVLDDFVKV True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 68.349 2 0.09210553681388453 0.0030031700127912796 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 3173 11420 AGEGLLAVQ True NCI_RA007_Epitope_Rep3 856.4654321547598 856.4648849679301 52.046 1 0.09210387736130846 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 6850 10327 AQIEGGVHGL True PC9_epitope_Rep5 979.50869394907 979.50758993586 44.707 2 0.09209540184036484 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 60444 22149 LILEPSLYTV True PC9_epitope_Rep2 1146.65362684726 1146.65252993586 90.678 2 0.09209299655817586 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'ENST00000553009.5_1_12:54718935-54736154:+|nuORF'] 65149 14665 LSDSFSDLY True H1975_Epitope_Rep1 1045.46040634397 1045.4593099358601 61.623 2 0.0920909241549613 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 47667 24062 IYPPLLGALSF True PC9_epitope_Rep3 1189.6746966450098 1189.67358993586 97.839 2 0.09208107239040071 0.0030031700127912796 0.9438714419765777 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 113818 8856 TREAGSALL True PC9_epitope_Rep5 916.4977949121999 916.49668993586 39.01 2 0.09207740863965325 0.0030031700127912796 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2', 'CCNA2|p.A20P|1|0.15|ENSG00000145386|chr4:121823571-121823571|C/G|missense_variant'] 116842 19374 TYMKDLYQL True PC9_epitope_Rep1 1173.5739966275698 1173.57288993586 79.331 2 0.0920758295602993 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 106131 5266 SVNSTVLVK True NCI_RA007_Epitope_Rep5 945.5494961318899 945.54838993586 26.952 2 0.09207210414815217 0.0030031700127912796 0.9438714419765777 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML'] 38509 6103 HHDDPEVL True PC9_epitope_Rep5 960.4301092752 960.42900993586 28.463 2 0.09204629541493729 0.0030031700127912796 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 35831 5437 GTYVSSVPR True NCI_RA007_Epitope_Rep5 964.4977949121999 964.49668993586 27.602 2 0.0920261057747572 0.0030031700127912796 0.9438714419765777 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF', 'ENSG00000204252|ENST00000229829|HLA-DOA'] 8336 7614 ATLQEALAH True NCI_RA007_Epitope_Rep4 952.4977949121999 952.49668993586 35.939 2 0.09201082216073979 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 138070 5363 YQDTHPERL True PC9_epitope_Rep5 1157.5465360097699 1157.54488490379 25.643 3 0.09200469498449249 0.0030031700127912796 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 32210 21313 GFGFVLFK True PC9_epitope_Rep5 913.5061747679299 913.50506993586 87.034 2 0.09198979556481292 0.0030031700127912796 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'HNRNPDL|p.A199T|1|0.1|ENSG00000152795|chr4:82428295-82428295|C/T|missense_variant', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 78204 9073 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 39.844 2 0.09198971118422553 0.0030031700127912796 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 76152 8391 NRSDPVTL True PC9_epitope_Rep1 900.46649478392 900.46538993586 37.112 2 0.09198820302254802 0.0030031700127912796 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 126596 6463 VPPPPPIAR True NCI_RA007_Epitope_Rep1 942.56508662638 942.56398993586 29.162 2 0.09198752370598803 0.0030031700127912796 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 7516 9078 ASEPSAQLSY True H1975_Epitope_Rep3 1051.4822044177101 1051.4816749679298 39.905 1 0.09198690286586014 0.0030031700127912796 0.9438714419765777 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF'] 2675 11329 AETAVSVIP True H1975_Epitope_Rep1 885.48074786573 885.47964993586 48.555 2 0.09198528819842892 0.0030031700127912796 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 132182 9524 VYITRAQLM True NCI_RA007_Epitope_Rep3 1093.5954007784899 1093.59430993586 44.555 2 0.09198394768347394 0.0030031700127912796 0.9438714419765777 ['ENSG00000160877|ENST00000292431|NACC1'] 92359 9809 RQPSLFYHL True NCI_RA007_Epitope_Rep3 1159.61382772395 1159.6127299358602 45.65 2 0.09196613033492189 0.0030031700127912796 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5', 'ENSG00000180815|ENST00000338883|MAP3K15'] 135063 23767 YALDLSTFL True PC9_epitope_Rep1 1041.53826274185 1041.5371699358602 96.215 2 0.091962330230428 0.0030031700127912796 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 84592 7133 QHDPETSVL True PC9_epitope_Rep6 1024.48253877088 1024.4814499358602 36.498 2 0.0919568857000871 0.0030031700127912796 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 69375 14108 LVQGELVTA True PC9_epitope_Rep2 928.5229470308799 928.52184993586 59.54 2 0.09194241625866197 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1'] 26258 11303 FIAPTGHSL True PC9_epitope_Rep4 941.4970666362101 941.49596993586 51.253 2 0.091937830945763 0.0030031700127912796 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 96724 11312 SEQFETVAV True H1975_Epitope_Rep2 1008.4763907612798 1008.47587496793 48.559 1 0.09193477896181884 0.0030031700127912796 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2', 'TGFBR2|p.K277E|1|0.47|ENSG00000163513|chr3:30672012-30672012|A/G|missense_variant'] 26735 21678 FLDGNELTL True PC9_epitope_Rep5 1020.51277627 1020.51227496793 88.432 1 0.09193357932376263 0.0030031700127912796 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 123412 9423 VIDQQNGLY True H1975_Epitope_Rep3 1048.5189242795998 1048.5178299358602 41.247 2 0.09193146933280437 0.0030031700127912796 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 3469 12149 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep1 1042.5658747883201 1042.56476993586 51.748 2 0.09192957732845199 0.0030031700127912796 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 26638 21622 FLADPSAFVAA True PC9_epitope_Rep5 1107.5600608155898 1107.5594749679299 88.209 1 0.09192904607694664 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 103480 5580 SRAPSVATV True PC9_epitope_Rep2 886.4872302285 886.48612993586 26.853 2 0.09192441629273236 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 99626 20718 SLFRVITEV True PC9_epitope_Rep3 1062.60734536118 1062.6062499358602 84.965 2 0.09192299569768893 0.0030031700127912796 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 139791 19723 YVDDFGVSV True PC9_epitope_Rep4 999.4549270407099 999.4543749679301 83.987 1 0.09192175465897191 0.0030031700127912796 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 52301 12826 KPANLLISA True PC9_epitope_Rep5 925.55966689277 925.55856993586 54.346 2 0.09191752188782477 0.0030031700127912796 0.9438714419765777 ['ENST00000459720.5_1_9:90585689-90589466:-|nuORF', 'nc|ENSG00000156345|Q8IZL9-2|CDK20', 'nc|ENSG00000156345|Q8IZL9-3|CDK20', 'nc|ENSG00000156345|Q8IZL9-5|CDK20', 'nc|ENSG00000156345|Q8IZL9-4|CDK20', 'ENSG00000156345|ENST00000325303|CDK20'] 35565 14183 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.51670993586 62.459 2 0.09191250748751495 0.0030031700127912796 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 72060 20099 MRASSFLIV True PC9_epitope_Rep1 1022.5582869937799 1022.5577749679301 82.139 1 0.091910268057264 0.0030031700127912796 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 84735 12455 QHGGFVVTV True PC9_epitope_Rep4 942.4923156089399 942.49120993586 55.715 2 0.09190673195287215 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 14791 13504 DYAETVHQL True PC9_epitope_Rep3 1074.49818883502 1074.49708993586 56.994 2 0.09190235950626617 0.0030031700127912796 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 103286 14680 SQTLVSQGL True PC9_epitope_Rep5 931.4974605590301 931.49636993586 61.471 2 0.09190067586807608 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 12626 17347 DLEEFFSTVGK True NCI_RA007_Epitope_Rep1 1270.60813320682 1270.60702993586 71.609 2 0.09189627513145124 0.0030031700127912796 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 103482 6511 SRAPSVATV True PC9_epitope_Rep3 886.4872302285 886.48612993586 30.072 2 0.09188928057791607 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 11783 6325 DHINGRVL True PC9_epitope_Rep1 922.49846361854 922.49736993586 29.141 2 0.09188621265689433 0.0030031700127912796 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 95312 16266 SAFDNFKEV True PC9_epitope_Rep1 1055.49237517859 1055.4912699358601 67.386 2 0.09188465519346299 0.0030031700127912796 0.9438714419765777 ['ENSG00000157827|ENST00000288670|FMNL2', 'nc|ENSG00000157827|Q96PY5|FMNL2', 'ENST00000492942.1_1_2:153435413-153463948:+|nuORF'] 48670 4790 KELEPLKEMTS True H1975_Epitope_Rep3 1303.66935356439 1303.66771490379 23.552 3 0.0918842609209023 0.0030031700127912796 0.9438714419765777 ['ENSG00000120162|ENST00000262244|MOB3B'] 31369 5510 GEAPPSAPP True H1975_Epitope_Rep2 821.3919328613299 821.39082993586 26.206 2 0.09187623985710144 0.0030031700127912796 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 51851 8689 KKLPPLPSL True NCI_RA007_Epitope_Rep3 991.64300259391 991.64190993586 41.258 2 0.09187567846732478 0.0030031700127912796 0.9438714419765777 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 6868 13923 AQIGSYVHV True PC9_epitope_Rep3 972.50288029264 972.50178993586 58.634 2 0.09187258396706927 0.0030031700127912796 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 127023 5520 VPYGVGKAA True PC9_epitope_Rep4 860.4756029156398 860.4745099358599 27.994 2 0.09184213122050432 0.0030031700127912796 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 47216 11928 IYDGFDGFAK True NCI_RA007_Epitope_Rep2 1131.52367530687 1131.52256993586 51.001 2 0.09183888626893703 0.0030031700127912796 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 95464 9746 SALSDLHA True PC9_epitope_Rep4 812.4028318982001 812.40172993586 45.124 2 0.09182812629878766 0.0030031700127912796 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF'] 73935 15287 NHIGEAVIL True PC9_epitope_Rep1 964.5341804209199 964.53308993586 63.623 2 0.09180419387884312 0.0030031700127912796 0.9438714419765777 ['ENST00000357430.7_1_2:223806358-223806715:+|nuORF'] 37756 7178 HAVGPSTSL True PC9_epitope_Rep1 867.4450310633501 867.44392993586 32.421 2 0.0918035730549463 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 107439 12353 SYVNHLYVI True NCI_RA007_Epitope_Rep4 1106.5760452329 1106.57494993586 54.512 2 0.09180229958855092 0.0030031700127912796 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5', 'nc|ENSG00000136237|Q92565-2|RAPGEF5'] 75808 12561 NRDDSNLYI True PC9_epitope_Rep1 1108.51490152832 1108.51380993586 53.185 2 0.09177712297272526 0.0030031700127912796 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1'] 83892 16659 QEIFYTAIV True H1975_Epitope_Rep2 1082.56481184286 1082.56370993586 69.313 2 0.0917769356620601 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS', 'nc|ENSG00000119969|Q9NRZ9-6|HELLS', 'nc|ENSG00000119969|Q9NRZ9-5|HELLS'] 127512 12662 VQVDGKIGL True PC9_epitope_Rep2 927.5389314481899 927.53782993586 54.011 2 0.09177580295715239 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 7204 14499 ARDFTVSAL True PC9_epitope_Rep2 978.5134449763399 978.51234993586 61.039 2 0.09177064562369626 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 36645 19533 GVLPNIQAV True PC9_epitope_Rep4 909.5283667644899 909.52781496793 83.255 1 0.09176831210350417 0.0030031700127912796 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 26989 17570 FLLDPVKGERL True PC9_epitope_Rep2 1285.73942215989 1285.73776490379 72.859 3 0.09175451207112949 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 98072 15338 SHVIQDIAL True PC9_epitope_Rep2 994.5447451046199 994.54364993586 64.277 2 0.09174415312795448 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10'] 102692 3901 SQDPGTHVV True PC9_epitope_Rep6 938.4457593393399 938.44466993586 21.672 2 0.09174290238206358 0.0030031700127912796 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 8001 7396 ATDPTIHTV True PC9_epitope_Rep1 953.4818104948899 953.48070993586 33.262 2 0.09173793071814 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 102734 21120 SQDYPTLAF True PC9_epitope_Rep3 1040.48147614172 1040.48097496793 86.521 1 0.09173681560317494 0.0030031700127912796 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 76698 5742 NTNPNFVR True PC9_epitope_Rep1 960.4777281739599 960.47662993586 26.904 2 0.09173576155755013 0.0030031700127912796 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 26068 8791 FHDSAVTSV True PC9_epitope_Rep1 961.45051036661 961.44940993586 38.655 2 0.09172999035664468 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 96033 10219 SEALPSDIAA True H1975_Epitope_Rep3 972.47639076128 972.47584496793 44.355 1 0.09172527447647912 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 27090 22812 FLPSYIIDV True PC9_epitope_Rep5 1065.57464825057 1065.57354993586 92.739 2 0.09171844658369838 0.0030031700127912796 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 35810 19176 GTYDIFYTA True PC9_epitope_Rep6 1049.47057710485 1049.47007496793 86.413 1 0.0917050462476151 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 125956 10155 VPAGGAVAV True PC9_epitope_Rep1 739.42283906679 739.42229496793 43.937 1 0.09170465369443392 0.0030031700127912796 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 28587 17216 FSPAGPILSIR True PC9_epitope_Rep6 1156.6604435632 1156.65934993586 78.812 2 0.0917032954971028 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENSG00000186288|ENST00000373519|PABPC1L2A', 'ENSG00000184388|ENST00000373521|PABPC1L2B'] 29817 20437 FVVDEVSNI True PC9_epitope_Rep1 1020.5127762699999 1020.51166993586 83.423 2 0.09169417327046667 0.0030031700127912796 0.9438714419765777 ['ENSG00000146425|ENST00000367089|DYNLT1'] 76470 14012 NTDFGDEFY True H1975_Epitope_Rep1 1106.4192698079798 1106.41867496793 59.058 1 0.09168632419791446 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 38594 20314 HHHSSVIFIF True PC9_epitope_Rep1 1222.6247267608198 1222.62307490379 82.967 3 0.09168072221278485 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 21174 12861 EREKWIHAL True PC9_epitope_Rep3 1180.63529144452 1180.6336349037902 54.488 3 0.09167636076883491 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 96293 7764 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43364496793 34.812 1 0.0916702968901758 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 6064 14952 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 62.335 2 0.09165118553976129 0.0030031700127912796 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 43264 12948 IHDGLTVHL True PC9_epitope_Rep5 1003.54507945779 1003.5439899358599 54.815 2 0.09164477395096175 0.0030031700127912796 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 5172 23236 ALPEIFTEL True PC9_epitope_Rep1 1031.55391280599 1031.55337496793 94.168 1 0.09164474481435118 0.0030031700127912796 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 96004 9283 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39630993586 40.665 2 0.09164331896615573 0.0030031700127912796 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 6080 14693 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 61.52 2 0.09163525594420399 0.0030031700127912796 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 28820 10065 FTDGQQLY True H1975_Epitope_Rep3 970.43961132974 970.4390649679301 43.753 1 0.09162589331010272 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 106180 9052 SVPEGPWWRK True NCI_RA007_Epitope_Rep4 1240.63529144452 1240.6341899358601 41.652 2 0.09162336480607598 0.0030031700127912796 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 87359 10257 QTDHLFFKY True H1975_Epitope_Rep2 1197.5818588893299 1197.58021490379 44.459 3 0.09162186614924926 0.0030031700127912796 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 42582 7408 IESRTLAIA True H1975_Epitope_Rep3 972.5603951687599 972.55928993586 33.472 2 0.09161916584583044 0.0030031700127912796 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 75783 14418 NRAPQLLIA True PC9_epitope_Rep1 994.5923640033799 994.5912699358599 60.283 2 0.09161909390019354 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 25534 5366 FEQGGARVV True H1975_Epitope_Rep2 961.4981292653698 961.49702993586 25.682 2 0.09161516665788014 0.0030031700127912796 0.9438714419765777 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 103949 15844 SRPPLVVF True PC9_epitope_Rep6 913.53853752537 913.53744993586 73.215 2 0.09161337805112794 0.0030031700127912796 0.9438714419765777 ['TMEM248|p.R131Pfs*40|1|0.15|ENSG00000106609|chr7:66945204-66945205|-/C|frameshift_variant', 'nc|ENSG00000106609|Q9NWD8-2|TMEM248', 'ENSG00000106609|ENST00000341567|TMEM248'] 73516 9487 NFGIGQDIQPK True NCI_RA007_Epitope_Rep5 1215.62478633047 1215.62368993586 43.125 2 0.09160724802073147 0.0030031700127912796 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000488538.1_1_4:83412536-83412710:-|nuORF', 'ENST00000441433.1_1_7:26961755-26962307:+|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 84182 6294 QESPGGLEA True H1975_Epitope_Rep2 886.4032258210199 886.40267496793 29.147 1 0.0916035784143399 0.0030031700127912796 0.9438714419765777 ['ARAP2-PDS5A|1|fusion', 'chr4:39825488-39837932|160|15.06|0.92|4.04|-|2|PDS5A,None|1', 'ENSG00000121892|ENST00000303538|PDS5A'] 106390 5374 SVSTVLTSK True NCI_RA007_Epitope_Rep5 920.51786165044 920.51676993586 27.36 2 0.09159880797364395 0.0030031700127912796 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 95632 14303 SAVGQFVSL True NCI_RA007_Epitope_Rep4 906.4810822188999 906.47998993586 62.318 2 0.09157616065147713 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1', 'nc|ENSG00000185024|Q92994-6|BRF1', 'nc|ENSG00000185024|Q92994-4|BRF1'] 1292 17066 AEDSVFVIV True H1975_Epitope_Rep2 977.50696261357 977.50586993586 70.907 2 0.09157527027862876 0.0030031700127912796 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF', 'ENST00000475596.1_1_2:190306218-190316629:+|nuORF', 'ENST00000472286.5_1_2:190306218-190320233:+|nuORF'] 127585 15361 VQYGNVPAV True PC9_epitope_Rep1 945.4919812557698 945.49088993586 63.903 2 0.09157267139494804 0.0030031700127912796 0.9438714419765777 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462', 'ENST00000497489.5_1_9:109691986-109693263:+|nuORF'] 2077 8631 AELIHQIEA True H1975_Epitope_Rep2 1022.53965972418 1022.53856993586 38.156 2 0.09157003523678092 0.0030031700127912796 0.9438714419765777 ['ENSG00000198707|ENST00000552810|CEP290'] 107671 19324 TAISLFYEL True NCI_RA007_Epitope_Rep4 1055.5539128059902 1055.55337496793 83.57 1 0.09156436902545921 0.0030031700127912796 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 132790 17231 VYSQIPAAVKL True PC9_epitope_Rep2 1187.6914093383098 1187.6903099358601 71.54 2 0.09156342701631197 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 96084 7480 SEDISHITP True H1975_Epitope_Rep2 997.47163973401 997.47054993586 33.719 2 0.09155672234724758 0.0030031700127912796 0.9438714419765777 ['ENSG00000138175|ENST00000260746|ARL3'] 83791 16296 QEELDTLFTTA True H1975_Epitope_Rep2 1266.5979624459399 1266.59686993586 67.902 2 0.09153843084884185 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A', 'nc|ENSG00000087995|Q96IZ6-2|METTL2A'] 117437 15686 VADPYVVIM True NCI_RA007_Epitope_Rep5 1005.5205045027299 1005.51997496793 67.052 1 0.0915370010962983 0.0030031700127912796 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 115821 14187 TVMDSKIVQV True PC9_epitope_Rep2 1118.60054572858 1118.59997496793 59.839 1 0.09153203827199793 0.0030031700127912796 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 34849 9347 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42828993586 40.892 2 0.09151638489402793 0.0030031700127912796 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 18765 9229 ELDPSNTKALY True H1975_Epitope_Rep2 1249.61903224369 1249.61792993586 40.454 2 0.09151420403978479 0.0030031700127912796 0.9438714419765777 ['ENSG00000171497|ENST00000307720|PPID'] 130669 15511 VVDAVVTQV True PC9_epitope_Rep1 928.5229470308799 928.52184993586 64.485 2 0.09150703823256774 0.0030031700127912796 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 14346 12669 DTDSINLY True H1975_Epitope_Rep3 939.4185415319901 939.4179949679301 53.941 1 0.09150475231646756 0.0030031700127912796 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61719906-61720176:-|nuORF'] 70824 5069 MEERAQLEA True H1975_Epitope_Rep1 1075.4968089360298 1075.49570993586 24.569 2 0.09150097648766672 0.0030031700127912796 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2'] 114369 9088 TSDETTLEY True H1975_Epitope_Rep3 1057.44515020265 1057.4440499358602 39.944 2 0.09149997163995445 0.0030031700127912796 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 1465 6499 AEELPHIHA True H1975_Epitope_Rep2 1015.5086939490701 1015.50758993586 29.915 2 0.09149649241423263 0.0030031700127912796 0.9438714419765777 ['ENST00000567436.1_1_16:30204298-30204508:-|nuORF', 'ENSG00000183336|ENST00000330978|BOLA2', 'ENSG00000169627|ENST00000651894|BOLA2B'] 74175 6046 NHYQKQLEI True PC9_epitope_Rep6 1171.5985715826298 1171.59691490379 31.62 3 0.09148947516691595 0.0030031700127912796 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 32674 14522 GHNGWVTQI True PC9_epitope_Rep5 1010.4933782380999 1010.49228993586 60.857 2 0.09148410339437081 0.0030031700127912796 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF', 'ENST00000503170.1_1_5:180669321-180670896:-|nuORF', 'ENST00000514318.1_1_5:180670199-180670896:-|nuORF'] 26073 8808 FHDSAVTSV True PC9_epitope_Rep5 961.45051036661 961.44940993586 38.825 2 0.09148212337121263 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 33531 19844 GLIDGVVEA True PC9_epitope_Rep2 871.46509780159 871.46454496793 81.721 1 0.09147911577846184 0.0030031700127912796 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL'] 70897 13942 MEIPTTIQC True H1975_Epitope_Rep1 1034.47765371458 1034.4770749679299 58.784 1 0.091478727921028 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 135919 10607 YEVEKTLGI True H1975_Epitope_Rep3 1050.5597264624198 1050.5586299358602 45.868 2 0.09147565682074144 0.0030031700127912796 0.9438714419765777 ['ENSG00000148606|ENST00000372371|POLR3A'] 136315 9380 YGYHDFGSS True PC9_epitope_Rep4 1031.3984747937498 1031.39736993586 43.69 2 0.09147482432188485 0.0030031700127912796 0.9438714419765777 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'ENST00000592763.5_1_19:10795072-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 113346 6415 TQKSLSLSPG True NCI_RA007_Epitope_Rep2 1016.5502244078799 1016.54912993586 29.561 2 0.09147039403322889 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 75528 22181 NQLDSLMGL True PC9_epitope_Rep1 989.48518162317 989.4846349679301 90.139 1 0.09146868096962452 0.0030031700127912796 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 97817 14146 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 59.496 2 0.09145396802392503 0.0030031700127912796 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 46801 17048 IVDNTTMQL True PC9_epitope_Rep1 1033.51139637101 1033.51028993586 70.401 2 0.09145389977426166 0.0030031700127912796 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 35402 13064 GTDELRLLY True H1975_Epitope_Rep2 1078.56587447202 1078.56537496793 55.373 1 0.09145301041179471 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 35305 12191 GSSGGVIYL True H1975_Epitope_Rep2 851.43888305375 851.43833496793 51.974 1 0.09144917883124785 0.0030031700127912796 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 96678 7221 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.4183249679301 32.709 1 0.09144658960251378 0.0030031700127912796 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 119381 8798 VENSPSPLP True H1975_Epitope_Rep2 938.4709114580199 938.4703649679301 38.806 1 0.09144028183729304 0.0030031700127912796 0.9438714419765777 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'ENST00000399098.5_2_21:38444584-38445304:-|nuORF', 'ENST00000329667.7_1_21:38439639-38444836:-|nuORF', 'ENST00000430792.1_1_21:38444584-38444998:-|nuORF', 'ENST00000479152.1_1_21:38441850-38444998:-|nuORF'] 24427 4263 FAGDDAPRA True NCI_RA007_Epitope_Rep5 918.4195445915 918.4184499358599 22.969 2 0.09144023816307416 0.0030031700127912796 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 113343 6289 TQKSLSLSPG True NCI_RA007_Epitope_Rep1 1016.5502244078799 1016.54912993586 28.492 2 0.09143602382351917 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 39826 18643 HQFPELMGV True PC9_epitope_Rep4 1056.5062514209199 1056.5051499358601 79.788 2 0.09143496606907792 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'nc|ENSG00000004866|Q9NRC1-5|ST7', 'nc|ENSG00000004866|Q9NRC1-3|ST7', 'nc|ENSG00000004866|Q9NRC1-2|ST7', 'ENST00000464020.1_1_7:116859112-116863031:+|nuORF', 'nc|ENSG00000004866|Q9NRC1-6|ST7'] 1800 8608 AEIDAHLVA True H1975_Epitope_Rep3 937.48689587533 937.48578993586 38.102 2 0.09143295280756969 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000554457.1_1_14:35786443-35786509:+|nuORF', 'nc|ENSG00000100902|P60900-3|PSMA6', 'ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 21568 5855 ERSEPTQAL True PC9_epitope_Rep1 1029.5090878718897 1029.50798993586 27.335 2 0.09142770600522666 0.0030031700127912796 0.9438714419765777 ['ENST00000587807.5_1_18:54270260-54293401:-|nuORF', 'ENSG00000091164|ENST00000217515|TXNL1'] 140009 15698 YVLEGLKSV True PC9_epitope_Rep4 1006.5698972232999 1006.56880993586 68.308 2 0.09142757651200656 0.0030031700127912796 0.9438714419765777 ['ENST00000481600.5_1_10:127417653-127452038:+|nuORF', 'nc|ENSG00000107938|Q3B7T1-5|EDRF1', 'ENSG00000107938|ENST00000356792|EDRF1', 'nc|ENSG00000107938|Q3B7T1-3|EDRF1', 'EDRF1|p.A795Qfs*8|1|0.17|ENSG00000107938|chr10:125743067-125743067|G/-|frameshift_variant', 'ENST00000525091.5_1_10:127408310-127436620:+|nuORF'] 86528 9284 QRALPSEEL True PC9_epitope_Rep4 1041.54547338061 1041.54436993586 43.316 2 0.09142035273999904 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF', 'EIF4G1|p.G1434C|1|0.25|ENSG00000114867|chr3:184331511-184331511|G/T|missense_variant'] 84738 14070 QHGGFVVTV True PC9_epitope_Rep5 942.4923156089399 942.49120993586 59.134 2 0.09141566679343817 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 98259 7961 SIFDGRVVAK True NCI_RA007_Epitope_Rep4 1090.61349337078 1090.6123899358602 37.372 2 0.09140520027659907 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1', 'ENSG00000143183|ENST00000367881|TMCO1'] 67819 22637 LTIEDGIFEV True PC9_epitope_Rep2 1134.58085582982 1134.57974993586 92.567 2 0.09140442898528237 0.0030031700127912796 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 104970 18738 STIAILNSV True PC9_epitope_Rep6 916.5229470308801 916.52239496793 84.716 1 0.09140193465568983 0.0030031700127912796 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 72329 16457 MTDEWFSEY True H1975_Epitope_Rep2 1206.45394106454 1206.45337496793 68.52 1 0.09139730127469571 0.0030031700127912796 0.9438714419765777 ['ENST00000578795.1_1_17:28576037-28576226:-|nuORF', 'ENSG00000108578|ENST00000261714|BLMH'] 17225 12991 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 61.547 2 0.09139486733643197 0.0030031700127912796 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 54364 11438 KYQEYTNEL True PC9_epitope_Rep5 1186.5506183307 1186.5495299358602 48.995 2 0.0913935508285102 0.0030031700127912796 0.9438714419765777 ['ENSG00000183735|ENST00000331710|TBK1', 'ENST00000545392.1_1_12:64890804-64891535:+|nuORF'] 8261 4841 ATIQGAYAR True NCI_RA007_Epitope_Rep1 949.4981292653698 949.49702993586 22.91 2 0.0913701051034417 0.0030031700127912796 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 135642 7965 YEETSGVSV True H1975_Epitope_Rep2 969.4291062156899 969.42800993586 35.586 2 0.09136870396499071 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 138320 16457 YRAPEVLL True PC9_epitope_Rep1 959.5440168286299 959.54290993586 68.127 2 0.09136044048851105 0.0030031700127912796 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 11822 12421 DHMDGSYSL True PC9_epitope_Rep5 1023.3967605415901 1023.3956699358599 52.776 2 0.09135207704314022 0.0030031700127912796 0.9438714419765777 ['ENSG00000112290|ENST00000392589|WASF1'] 22241 10589 ETDNNIVVY True H1975_Epitope_Rep1 1065.4978544818498 1065.49727496793 45.684 1 0.09133775272741812 0.0030031700127912796 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 120268 16271 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 67.828 2 0.09133701287819239 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 49522 8708 KKFENEIIL True NCI_RA007_Epitope_Rep5 1132.6492101731599 1132.64755490379 40.163 3 0.09132761260264721 0.0030031700127912796 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.D1124Y|1|0.33|ENSG00000134516|chr5:170019097-170019097|G/T|missense_variant'] 27321 15625 FMDPASALY True H1975_Epitope_Rep2 1013.45281886573 1013.4522749679301 65.255 1 0.09132401016877933 0.0030031700127912796 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 95972 4501 SEADPSGVA True H1975_Epitope_Rep3 831.36102665587 831.36047496793 22.434 1 0.09132284722098015 0.0030031700127912796 0.9438714419765777 ['ENSG00000184990|ENST00000329967|SIVA1'] 52730 18109 KQLDFTYEM True PC9_epitope_Rep5 1173.53761111885 1173.53650993586 74.668 2 0.09131554598418794 0.0030031700127912796 0.9438714419765777 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81'] 2169 8557 AEMPADSGYPA True H1975_Epitope_Rep3 1107.45427541771 1107.4531699358602 37.903 2 0.09130967643698018 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 32107 13949 GEYGNLVTI True NCI_RA007_Epitope_Rep5 964.48656152216 964.48546993586 60.338 2 0.09130402651804279 0.0030031700127912796 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525056.1_1_11:108203545-108206748:+|nuORF'] 1084 5030 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.39082993586 24.428 2 0.09130277474759363 0.0030031700127912796 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 37287 19144 GVVPQLVKL True PC9_epitope_Rep2 951.6117024656298 951.61060993586 79.008 2 0.09130219540374736 0.0030031700127912796 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 14343 12718 DTDSINLY True H1975_Epitope_Rep2 939.4185415319901 939.4179949679301 54.02 1 0.09130193284265321 0.0030031700127912796 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61719906-61720176:-|nuORF'] 89411 8557 RENPNLVMPP True H1975_Epitope_Rep2 1165.5913780272099 1165.59028993586 37.871 2 0.09128685424824211 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 123388 7590 VIDDTNITR True PC9_epitope_Rep3 1045.5403880001702 1045.53928993586 34.193 2 0.09128643396656115 0.0030031700127912796 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 103380 18750 SQVQQLISL True PC9_epitope_Rep6 1014.5709598524599 1014.56986993586 84.762 2 0.091279015174314 0.0030031700127912796 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR'] 44149 22340 ILPPQLALF True PC9_epitope_Rep4 1010.6164534928998 1010.61534993586 94.168 2 0.09127521779815742 0.0030031700127912796 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 6074 13550 APMPPIIHA True PC9_epitope_Rep4 945.51060852537 945.50950993586 60.015 2 0.09127190435851265 0.0030031700127912796 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 124639 20621 VLIENVASL True PC9_epitope_Rep2 956.5542471591599 956.55314993586 84.752 2 0.0912649100014539 0.0030031700127912796 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 76573 6531 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.4608649679301 30.033 1 0.09124789561479471 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 132545 22752 VYPGLAVFF True PC9_epitope_Rep4 1011.5429541994698 1011.5423749679301 95.735 1 0.09124694992849428 0.0030031700127912796 0.9438714419765777 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 107753 8969 TAMDAQEAL True NCI_RA007_Epitope_Rep4 948.4222470134399 948.42114993586 41.336 2 0.09124603847596097 0.0030031700127912796 0.9438714419765777 ['ENST00000433877.6_1_12:122990076-123005058:-|nuORF', 'nc|ENSG00000111011|Q7L4I2-2|RSRC2', 'ENSG00000111011|ENST00000331738|RSRC2'] 118637 4906 VEAPPPKVNP True H1975_Epitope_Rep3 1046.5760452329 1046.57494993586 23.998 2 0.09123703316396004 0.0030031700127912796 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 109782 15980 THISPNAIF True PC9_epitope_Rep5 998.5185303567799 998.51742993586 66.458 2 0.09123406194393147 0.0030031700127912796 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant'] 104990 8912 STIEYVIQR True NCI_RA007_Epitope_Rep4 1107.59242357303 1107.59187496793 41.112 1 0.09121104839754375 0.0030031700127912796 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 116855 16346 TYNEPGSQVF True PC9_epitope_Rep5 1140.50875351872 1140.5076499358602 67.872 2 0.09120922460012916 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.W992Mfs*12|1|0.31|ENSG00000163939|chr3:52587502-52587503|-/T|frameshift_variant', 'PBRM1|p.P1361Hfs*23|1|0.28|ENSG00000163939|chr3:52563287-52563287|G/-|frameshift_variant'] 31515 11475 GEFAYTYAA True H1975_Epitope_Rep3 991.4287122928699 991.42816496793 49.26 1 0.09119915844722289 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1'] 46748 20086 IVAPGTFEV True PC9_epitope_Rep5 931.5014833103099 931.50038993586 82.31 2 0.09119838235007025 0.0030031700127912796 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 21204 13274 ERFEKTFQL True PC9_epitope_Rep2 1196.6189726740397 1196.61733490379 56.336 3 0.09119554735835257 0.0030031700127912796 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 14107 16354 DSDWFAENY True H1975_Epitope_Rep2 1145.43016884485 1145.42906993586 68.124 2 0.09119310987226166 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000138029|P55084-2|HADHB', 'ENSG00000138029|ENST00000317799|HADHB'] 96007 9289 SEAFSVASA True H1975_Epitope_Rep3 867.3974121645899 867.39686496793 40.725 1 0.09118923881698907 0.0030031700127912796 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 1685 10111 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 43.888 1 0.09118590113943646 0.0030031700127912796 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 17418 7197 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.53465490379 32.649 3 0.09118479032196239 0.0030031700127912796 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 71846 19775 MPFGNVVSA True PC9_epitope_Rep5 920.4425885351999 920.44148993586 81.11 2 0.0911790371065354 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 1892 5284 AEIKDGERLP True H1975_Epitope_Rep3 1126.59823722946 1126.5971499358602 25.407 2 0.09117870464077601 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 34703 12725 GQMDPSAQI True PC9_epitope_Rep5 945.4225813666098 945.42148993586 53.954 2 0.09117246259598247 0.0030031700127912796 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000493446.1_1_7:1510215-1510538:-|nuORF'] 8721 16953 AVDLTLPKV True PC9_epitope_Rep6 954.57498260374 954.57388993586 77.755 2 0.09117187308508942 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 57465 10375 LEIVNPQAA True H1975_Epitope_Rep3 953.51819600361 953.5176449679301 44.963 1 0.09116974830986714 0.0030031700127912796 0.9438714419765777 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 33183 13301 GKVQIPIML True NCI_RA007_Epitope_Rep3 997.5994235297699 997.59832993586 59.585 2 0.09116958861743873 0.0030031700127912796 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 91529 13868 RPADVIFAT True PC9_epitope_Rep2 988.5341804209199 988.53308993586 58.626 2 0.0911643329881481 0.0030031700127912796 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 95430 17175 SALDTITTV True PC9_epitope_Rep6 919.48622716899 919.48512993586 78.651 2 0.09115278956657165 0.0030031700127912796 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 106542 12180 SVVTGGVQSV True PC9_epitope_Rep3 931.49746055903 931.49636993586 51.886 2 0.09114154551001914 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 71874 8201 MPNGDHIVSA True PC9_epitope_Rep2 1039.47567956863 1039.4745899358602 36.904 2 0.09114154498940764 0.0030031700127912796 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 9164 14627 AVNPHFIAV True PC9_epitope_Rep2 966.5287011176599 966.52760993586 61.53 2 0.09113948716463961 0.0030031700127912796 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 139312 6318 YTDM[Oxidation]ESEDY True H1975_Epitope_Rep2 1167.39140075807 1167.39087496793 29.238 1 0.09113076733426975 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'ENST00000474971.1_1_X:53563041-53563582:-|nuORF'] 42850 16729 IFNPVSKNF True PC9_epitope_Rep3 1064.5654805492002 1064.5643899358602 69.487 2 0.09112413522403341 0.0030031700127912796 0.9438714419765777 ['ENST00000589391.5_1_2:179401165-179403504:+|nuORF', 'ENST00000415561.1_1_2:179402212-179403504:+|nuORF', 'ENST00000588244.5_1_2:179402120-179403504:+|nuORF', 'ENST00000419746.5_1_2:179402219-179403504:+|nuORF', 'ENST00000589434.5_1_2:179388144-179403504:+|nuORF'] 103685 9214 SRDQSTPII True PC9_epitope_Rep1 1015.5298233164699 1015.52872993586 40.294 2 0.09112086284588848 0.0030031700127912796 0.9438714419765777 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 139871 18696 YVDPVITSI True PC9_epitope_Rep6 1005.53826274185 1005.53767496793 84.557 1 0.09111915033356778 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 9307 11646 AVSDGVIKV True PC9_epitope_Rep5 886.5123823471799 886.51128993586 49.792 2 0.09110326225746512 0.0030031700127912796 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 48407 4200 KEDKPPLAP True H1975_Epitope_Rep3 993.5494961318898 993.54838993586 21.273 2 0.09109532144153662 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 21689 14680 ERYFISHVL True PC9_epitope_Rep4 1162.61349337078 1162.6118549037901 64.402 3 0.09109189108693015 0.0030031700127912796 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000459969.5_1_2:10262865-10264033:+|nuORF', 'ENST00000491447.1_1_2:10262886-10264978:+|nuORF'] 111514 10148 TLLQEQGTKTV True PC9_epitope_Rep1 1216.66631678928 1216.66520993586 43.91 2 0.0910917865014194 0.0030031700127912796 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant'] 39609 9679 HPLLGVSA True PC9_epitope_Rep4 792.4493881678001 792.4488349679301 44.86 1 0.0910865562900453 0.0030031700127912796 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 140341 17675 YYEHEFVEL True PC9_epitope_Rep4 1227.5448046742697 1227.54370993586 76.012 2 0.09108302782087346 0.0030031700127912796 0.9438714419765777 ['ATP9B|p.T1064Rfs*5|1|0.1|ENSG00000166377|chr18:79374017-79374017|A/-|frameshift_variant', 'nc|ENSG00000166377|O43861-2|ATP9B', 'ENSG00000166377|ENST00000426216|ATP9B'] 1831 12118 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.4856749679301 51.696 1 0.0910614493117956 0.0030031700127912796 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 47753 8313 IYQRDPLKL True NCI_RA007_Epitope_Rep1 1144.6604435631998 1144.65880490379 36.336 3 0.09105951743873417 0.0030031700127912796 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 88036 14185 QVTNEFQTV True PC9_epitope_Rep2 1064.51383889916 1064.51274993586 59.831 2 0.09105888496081914 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 27510 20135 FPFAPPAAA True PC9_epitope_Rep2 887.4541391950698 887.45359496793 82.86 1 0.09104651555068728 0.0030031700127912796 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 89471 5974 REQLEQQVP True H1975_Epitope_Rep2 1125.5778361380499 1125.5767299358602 27.958 2 0.09103756994440564 0.0030031700127912796 0.9438714419765777 ['ENST00000557932.5_1_15:102513813-102516466:+|nuORF', 'ENST00000400706.3_1_12:88275-90926:+|nuORF', 'nc|ENSG00000292372|Q9NQA3|WASH6P', 'nc|ENSG00000185596|C4AMC7|WASH3P', 'nc|ENSG00000291134|Q6VEQ5|WASH2P', 'ENSG00000181404|ENST00000696149|WASHC1', 'nc|ENSG00000234769|A8MWX3|WASH4P', 'ENSG00000182484|ENST00000359512|WASH6P', 'ENST00000538033.2_1_2:114353729-114354265:+|nuORF', 'ENST00000482170.6_1_X:155252010-155252984:+|nuORF'] 40802 19230 HVIDLDDATFL True PC9_epitope_Rep6 1257.62411762413 1257.6230299358601 86.62 2 0.09102911569353195 0.0030031700127912796 0.9438714419765777 ['ENSG00000152219|ENST00000282032|ARL14EP'] 76949 20839 NVPEGLLATV True PC9_epitope_Rep2 1011.56006081559 1011.55896993586 85.603 2 0.09102537560259985 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 35497 7636 GTFPGNYVK True NCI_RA007_Epitope_Rep5 981.4919812557698 981.49088993586 36.076 2 0.09100399087510204 0.0030031700127912796 0.9438714419765777 ['nc|ENSG00000095637|Q9BX66-12|SORBS1', 'nc|ENSG00000095637|Q9BX66-9|SORBS1', 'ENSG00000095637|ENST00000371247|SORBS1', 'nc|ENSG00000095637|Q9BX66-11|SORBS1', 'nc|ENSG00000095637|Q9BX66-2|SORBS1', 'nc|ENSG00000095637|Q9BX66-5|SORBS1', 'nc|ENSG00000095637|Q9BX66-3|SORBS1', 'nc|ENSG00000095637|Q9BX66-6|SORBS1', 'nc|ENSG00000095637|Q9BX66-10|SORBS1', 'nc|ENSG00000095637|Q9BX66-8|SORBS1', 'nc|ENSG00000095637|Q9BX66-4|SORBS1', 'nc|ENSG00000154556|O94875-12|SORBS2', 'nc|ENSG00000154556|O94875-10|SORBS2', 'nc|ENSG00000154556|O94875-4|SORBS2', 'nc|ENSG00000154556|O94875-2|SORBS2', 'nc|ENSG00000154556|O94875-8|SORBS2', 'nc|ENSG00000154556|O94875-3|SORBS2', 'nc|ENSG00000154556|O94875-9|SORBS2', 'ENST00000478461.1_1_4:186508783-186510953:-|nuORF', 'nc|ENSG00000154556|O94875-7|SORBS2', 'nc|ENSG00000154556|O94875|SORBS2', 'nc|ENSG00000154556|O94875-11|SORBS2', 'ENSG00000154556|ENST00000695409|SORBS2'] 114239 15821 TRYIAPTIL True PC9_epitope_Rep4 1046.6124307416198 1046.61132993586 68.779 2 0.09099287628679799 0.0030031700127912796 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 43777 20929 IIYPGAFVDL True PC9_epitope_Rep6 1106.60119735158 1106.60010993586 93.276 2 0.09099183885859818 0.0030031700127912796 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 86823 13130 QRPPTIVL True PC9_epitope_Rep2 922.5600012459399 922.55890993586 55.777 2 0.09098984351010413 0.0030031700127912796 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 114977 6954 TTISKVSQV True PC9_epitope_Rep3 961.5444107514498 961.54330993586 31.761 2 0.09098260217464726 0.003029460811561979 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 30028 15791 FYHKYFNYL True PC9_epitope_Rep6 1293.61824439805 1293.6171499358602 72.992 2 0.09097594945288516 0.003029460811561979 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 72062 19529 MRASSFLIV True PC9_epitope_Rep2 1022.5582869937799 1022.55718993586 80.502 2 0.09097119526997365 0.003029460811561979 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 112922 22761 TPQSIFIFA True PC9_epitope_Rep3 1022.5436824754598 1022.5431749679301 92.819 1 0.09096998178518886 0.003029460811561979 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 105465 6820 SVASISLTK True NCI_RA007_Epitope_Rep5 904.52294703088 904.52184993586 32.919 2 0.09096778281305633 0.003029460811561979 0.9438714419765777 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 125983 9935 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.49088993586 43.545 2 0.09096772481085913 0.003029460811561979 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 131522 20865 VVVGDLVEV True PC9_epitope_Rep5 927.5276980581499 927.5271449679301 85.309 1 0.0909607356714086 0.003029460811561979 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 139287 6327 YTDKIM[Oxidation]TY True H1975_Epitope_Rep2 1049.47394861357 1049.47284993586 29.269 2 0.0909591645349258 0.003029460811561979 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 135335 13470 YDAGEVSFY True H1975_Epitope_Rep2 1049.43419159613 1049.4336749679298 56.946 1 0.09094589125458286 0.003029460811561979 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 87429 11687 QTEEDYTLTM[Oxidation]Y True H1975_Epitope_Rep3 1408.5704277492 1408.5693299358602 50.092 2 0.09092877716193853 0.003029460811561979 0.9438714419765777 ['nc|ENSG00000166206|P28472-3|GABRB3'] 73820 9113 NHDTGEYVL True PC9_epitope_Rep6 1046.46688870674 1046.4657899358601 45.146 2 0.09091961307940925 0.003029460811561979 0.9438714419765777 ['ENSG00000144597|ENST00000396842|EAF1'] 114360 13145 TSDELQFGY True H1975_Epitope_Rep3 1058.4556553167 1058.45454993586 55.81 2 0.09091873239326752 0.003029460811561979 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 107201 22930 SYPDLLPTF True PC9_epitope_Rep1 1051.52261267771 1051.52207496793 93.001 1 0.09091431464022791 0.003029460811561979 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 1914 4464 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 22.285 2 0.09090300463317164 0.003029460811561979 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 4679 9678 ALDFIASK True NCI_RA007_Epitope_Rep1 863.47526856247 863.47416993586 41.645 2 0.09088857022500337 0.003029460811561979 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 32089 8414 GEYGDSPVP True H1975_Epitope_Rep2 919.3923267841499 919.39177496793 37.318 1 0.09088382400361081 0.003029460811561979 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 40656 11573 HTILIVEKV True PC9_epitope_Rep2 1050.6437308699 1050.6426299358602 49.839 2 0.09088291288014634 0.003029460811561979 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF'] 31502 6160 GEEQPPQPP True H1975_Epitope_Rep2 977.4454249861699 977.44432993586 28.667 2 0.0908822235417609 0.003029460811561979 0.9438714419765777 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 102286 17564 SPTYQYVTV True PC9_epitope_Rep1 1056.5127762700001 1056.51166993586 72.353 2 0.09087535961933281 0.003056914184081814 0.9438714419765777 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 118626 3979 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 20.374 2 0.09087347275848978 0.003056914184081814 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 116927 12790 TYPDVNNSI True PC9_epitope_Rep6 1021.4716397340101 1021.47107496793 60.694 1 0.09087273703488408 0.003056914184081814 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 85111 17561 QISDTSVVL True PC9_epitope_Rep2 960.51277627 960.51166993586 72.821 2 0.09087200887640641 0.003056914184081814 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 28270 11708 FRVKYETEL True PC9_epitope_Rep4 1183.62372370131 1183.62208490379 52.797 3 0.09085918239657655 0.0030833333333333333 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 71989 23157 MQAPLLIAL True PC9_epitope_Rep1 968.5728744287599 968.5723249679301 93.868 1 0.09084442438648305 0.0030833333333333333 0.9438714419765777 ['ENSG00000196743|ENST00000357164|GM2A'] 8319 6313 ATLNSIVAK True NCI_RA007_Epitope_Rep3 915.5389314481899 915.53782993586 31.834 2 0.09083751824469777 0.0030833333333333333 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 110457 15749 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.53308993586 65.735 2 0.09082678702641121 0.0030833333333333333 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 94639 20988 RYLDLFTNF True PC9_epitope_Rep4 1187.59750895347 1187.59640993586 88.891 2 0.0908239374936788 0.0030833333333333333 0.9438714419765777 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'KDELR3|p.F122Lfs*15|1|0.31|ENSG00000100196|chr22:38481225-38481228|TCTC/-|frameshift_variant'] 104571 5539 SSSPPILTK True NCI_RA007_Epitope_Rep4 928.52294703088 928.52184993586 27.902 2 0.09082335379188308 0.0030833333333333333 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A'] 116354 19806 TVYEGFISA True PC9_epitope_Rep2 985.4756624852898 985.47511496793 81.573 1 0.09082205699152712 0.0030833333333333333 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 48474 5587 KEERPPELP True H1975_Epitope_Rep2 1093.5767735088898 1093.57566993586 26.492 2 0.09082156616819353 0.0030833333333333333 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 109826 18248 THLESLVEL True PC9_epitope_Rep4 1039.5549754351498 1039.5538699358601 78.261 2 0.0908119083910981 0.0030833333333333333 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4'] 132766 17560 VYSPHVLNL True PC9_epitope_Rep5 1040.5654805492 1040.5643899358602 72.552 2 0.09081175788409306 0.0030833333333333333 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 45331 8077 ISDAPAPAY True H1975_Epitope_Rep3 903.43379767331 903.43324496793 36.042 1 0.09081053293813184 0.0030833333333333333 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 38929 20946 HIPDVITYL True PC9_epitope_Rep1 1069.58079626017 1069.5796899358602 85.389 2 0.0908031164165166 0.0030833333333333333 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 131646 24212 VWFPDMMPTW True PC9_epitope_Rep1 1308.5671374253197 1308.5660299358601 97.946 2 0.09080146376243342 0.0030833333333333333 0.9438714419765777 ['ENSG00000005812|ENST00000355619|FBXL3'] 132473 21883 VYPASKMFPFI True PC9_epitope_Rep5 1298.67331674602 1298.67220993586 89.212 2 0.09078452876277796 0.0030833333333333333 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 102918 16544 SQIHDIVLV True PC9_epitope_Rep2 1022.5760452328999 1022.5754749679301 68.874 1 0.09077875869828607 0.0030833333333333333 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 22295 10518 ETEDVNLAY True H1975_Epitope_Rep1 1052.4662200004 1052.46567496793 45.409 1 0.09077819440395682 0.0030833333333333333 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000153767|ENST00000283875|GTF2E1'] 131968 7676 VYGDVQRV True PC9_epitope_Rep1 934.4872302284999 934.48612993586 34.347 2 0.09075671448724056 0.0031093836757357025 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF', 'PTBP2|p.A484Rfs*2|2|0.3|ENSG00000117569|chr1:96813062-96813063|-/T|frameshift_variant', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 108268 10713 TEAPVPVSV True H1975_Epitope_Rep2 897.4807478657299 897.47964993586 46.232 2 0.09075150723676202 0.0031093836757357025 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 120323 14727 VFPEKGYSF True PC9_epitope_Rep4 1072.5229470308798 1072.52184993586 64.581 2 0.09074516992236299 0.0031093836757357025 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 38703 14706 HHSLALTSF True PC9_epitope_Rep3 1011.51377932951 1011.51268993586 61.706 2 0.09074458156534686 0.0031093836757357025 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'TSEN34|p.K87Q|1|0.15|ENSG00000170892|chr19:54191736-54191736|A/C|missense_variant'] 106979 16323 SYLENVDHF True PC9_epitope_Rep4 1122.49818883502 1122.49708993586 70.75 2 0.09074107345789562 0.0031093836757357025 0.9438714419765777 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-5|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF'] 33201 19309 GLAAGGIVAV True PC9_epitope_Rep3 826.4912529797799 826.49070496793 79.494 1 0.09073988910122736 0.0031093836757357025 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 101852 8023 SPKQILDPA True PC9_epitope_Rep2 967.5338460677499 967.53274993586 36.221 2 0.09073927610179947 0.0031093836757357025 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant'] 135619 12374 YEEPLSPISA True H1975_Epitope_Rep3 1104.5339056373998 1104.53280993586 52.784 2 0.0907344424056131 0.0031093836757357025 0.9438714419765777 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000467894.5_1_1:33790468-33797238:-|nuORF', 'nc|ENSG00000134686|Q8IXK0-2|PHC2', 'nc|ENSG00000134686|Q8IXK0-3|PHC2', 'ENST00000485928.5_1_1:33791428-33799821:-|nuORF'] 43407 7978 IHSEPLGV True PC9_epitope_Rep6 850.45486747106 850.45376993586 40.147 2 0.09073054096369462 0.0031093836757357025 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 35056 7382 GRFADSHEL True PC9_epitope_Rep5 1030.4832074772198 1030.48210993586 33.353 2 0.09072322620300825 0.0031093836757357025 0.9438714419765777 ['ENSG00000121680|ENST00000378750|PEX16', 'nc|ENSG00000121680|Q9Y5Y5-2|PEX16'] 60077 19218 LHSLPIVSM True PC9_epitope_Rep3 995.54738795691 995.54628993586 79.141 2 0.09071892419192368 0.0031093836757357025 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 33203 18283 GLAAGGIVAV True PC9_epitope_Rep4 826.4912529797799 826.49070496793 78.396 1 0.09070798216730894 0.0031093836757357025 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 92149 5478 RQAQAAGVSL True NCI_RA007_Epitope_Rep3 999.5461420869498 999.54504993586 28.555 2 0.090706233938626 0.0031093836757357025 0.9438714419765777 ['ENSG00000130052|ENST00000374599|STARD8', 'nc|ENSG00000130052|Q92502|STARD8'] 1942 11947 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 50.958 1 0.09070162424305471 0.0031093836757357025 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 9232 9685 AVQEFGLARFK True NCI_RA007_Epitope_Rep5 1264.6928063206399 1264.69117490379 43.89 3 0.09069276167226603 0.0031093836757357025 0.9438714419765777 ['nc|ENSG00000169230|Q9Y255-2|PRELID1', 'ENSG00000169230|ENST00000303204|PRELID1'] 27664 18103 FQDDRYLYM True PC9_epitope_Rep2 1249.54375912845 1249.5426699358602 74.935 2 0.09069025077325264 0.0031093836757357025 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENST00000582445.1_1_18:18625251-18629157:-|nuORF', 'ENSG00000134318|ENST00000315872|ROCK2'] 104967 20782 STIAILNSV True PC9_epitope_Rep5 916.5229470308801 916.52239496793 84.99 1 0.09066532321437044 0.0031093836757357025 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 54155 19522 KYNDTFWKEF True PC9_epitope_Rep3 1376.6401020414398 1376.63845490379 80.322 3 0.09065704129969429 0.0031093836757357025 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 103283 14731 SQTLVSQGL True PC9_epitope_Rep3 931.4974605590301 931.49636993586 61.8 2 0.09065477813433727 0.0031093836757357025 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 36393 21697 GVIAGLNVL True PC9_epitope_Rep5 854.52255310806 854.52144993586 88.505 2 0.0906453117486359 0.0031093836757357025 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 13943 15624 DRIKDEFQL True PC9_epitope_Rep3 1162.59823722946 1162.5965849037902 65.245 3 0.09063409477760687 0.0031327104876493583 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 132771 16707 VYSPLGSAYKL True PC9_epitope_Rep6 1196.6441247927198 1196.64302993586 76.738 2 0.09063373032134181 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'ENST00000514806.5_1_5:54965038-54993786:-|nuORF'] 73281 5403 NEIKDSVVA True H1975_Epitope_Rep3 973.5080252427299 973.50692993586 25.845 2 0.09063253398146574 0.0031327104876493583 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 70866 19286 MEGLSWLV True H1975_Epitope_Rep2 933.4629896266099 933.4624449679301 80.045 1 0.09062247170798496 0.0031327104876493583 0.9438714419765777 ['ENST00000378119.8_1_6:24720562-24720727:-|nuORF'] 9926 20137 AYPPAPFMHI True PC9_epitope_Rep3 1142.55828699378 1142.5571899358602 82.711 2 0.09061240037719746 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 127441 19637 VQSGLRILL True PC9_epitope_Rep1 997.6284151589299 997.62730993586 80.358 2 0.0905961926382376 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 96761 5665 SEQPRGPIP True H1975_Epitope_Rep3 979.5086939490698 979.50758993586 26.819 2 0.09059289747173117 0.0031327104876493583 0.9438714419765777 ['ENST00000450873.6_2_7:66236975-66240294:+|nuORF'] 88479 13291 RAADVLVYL True NCI_RA007_Epitope_Rep3 1018.5811306133398 1018.58002993586 59.548 2 0.0905725467957005 0.0031327104876493583 0.9438714419765777 ['ENSG00000126391|ENST00000317568|FRMD8', 'nc|ENSG00000227942|Q9BZ68|FRMD8P1', 'nc|ENSG00000126391|Q9BZ67-3|FRMD8'] 2436 7311 AEQLTAPPSA True H1975_Epitope_Rep1 983.4923751785899 983.49126993586 33.129 2 0.09056035066246482 0.0031327104876493583 0.9438714419765777 ['ENSG00000075218|ENST00000454366|GTSE1', 'ENST00000466510.5_1_22:46711975-46722552:+|nuORF', 'ENST00000479645.1_1_22:46711975-46724816:+|nuORF'] 44831 19917 IPVYSPLSA True PC9_epitope_Rep3 945.5171333744499 945.51602993586 81.851 2 0.09055628816398323 0.0031327104876493583 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 78195 8984 PAPPPPPPP True PC9_epitope_Rep3 865.46978925921 865.46868993586 39.502 2 0.09055244555031403 0.0031327104876493583 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 10021 18886 AYTPFHAVL True PC9_epitope_Rep3 1017.5283667644899 1017.52726993586 77.868 2 0.0905346947775158 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 49413 18731 KILPTLEAV True PC9_epitope_Rep3 982.60628273202 982.60518993586 77.272 2 0.09053281156861108 0.0031327104876493583 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 31017 22343 GAVDPLLAL True PC9_epitope_Rep5 867.50656869075 867.50546993586 90.953 2 0.09052727580788142 0.0031327104876493583 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 25333 14570 FEFELNQPA True H1975_Epitope_Rep2 1093.50802524273 1093.5069299358602 61.199 2 0.09051370157756765 0.0031327104876493583 0.9438714419765777 ['ENSG00000005812|ENST00000355619|FBXL3'] 1510 10350 AEEPVFAAA True H1975_Epitope_Rep1 903.4337976733099 903.43324496793 44.758 1 0.0905032911808268 0.0031327104876493583 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 84275 12618 QEYFGSLAA True H1975_Epitope_Rep2 984.4552613938797 984.45471496793 53.633 1 0.09049865348876877 0.0031327104876493583 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 90716 5018 RKNVQNINL True NCI_RA007_Epitope_Rep4 1097.63054041725 1097.62944993586 25.788 2 0.09049622795785699 0.0031327104876493583 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 4026 12251 AHLDATTVL True PC9_epitope_Rep4 939.5025459394701 939.50144993586 54.94 2 0.09049287354197966 0.0031327104876493583 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 58136 7523 LESELIKSA True H1975_Epitope_Rep2 988.5440763982799 988.54296993586 33.888 2 0.0904911649748396 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion'] 131518 20837 VVVGDLVEV True PC9_epitope_Rep3 927.5276980581499 927.52660993586 85.421 2 0.09048773317882002 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 52105 19743 KLPSETIFVGC True PC9_epitope_Rep3 1192.61619579272 1192.6150899358602 81.169 2 0.09047106057390505 0.0031327104876493583 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 11644 10514 DHATTALL True PC9_epitope_Rep2 840.43413202648 840.43302993586 45.764 2 0.09046463389774222 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'ENST00000514280.1_1_5:79646842-79647379:-|nuORF'] 27088 22760 FLPSYIIDV True PC9_epitope_Rep3 1065.57464825057 1065.57354993586 92.815 2 0.09046145537303465 0.0031327104876493583 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 191 20291 AAFDGGFTV True PC9_epitope_Rep2 883.4075829254699 883.40703496793 83.471 1 0.09044749153662207 0.0031327104876493583 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 137593 21557 YLTDLQVSL True PC9_epitope_Rep2 1050.55972646242 1050.5586299358602 88.388 2 0.09044128104380232 0.0031327104876493583 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 21282 16246 ERIPDVAAL True PC9_epitope_Rep2 982.5447451046199 982.54364993586 67.734 2 0.09043754283521764 0.0031327104876493583 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 56789 14936 LEATINELV True NCI_RA007_Epitope_Rep1 1000.5440763982799 1000.54296993586 62.159 2 0.09042858612278505 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 103487 6513 SRAPSVATV True PC9_epitope_Rep5 886.4872302285 886.48612993586 30.025 2 0.09042028662911612 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 70300 20966 LYPEGLAQL True PC9_epitope_Rep5 1002.5385970950199 1002.53750993586 85.705 2 0.09041872532821518 0.0031327104876493583 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 61734 20886 LLIPGLATA True PC9_epitope_Rep4 867.54295419947 867.5424049679301 88.496 1 0.09041791765067217 0.0031327104876493583 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 31503 5958 GEEQPPQPP True H1975_Epitope_Rep3 977.4454249861699 977.44432993586 27.929 2 0.09041428408929097 0.0031327104876493583 0.9438714419765777 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 74585 9579 NLDPAVHEV True PC9_epitope_Rep2 992.49270953176 992.49160993586 42.19 2 0.09041014442959824 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'ENST00000503738.5_1_2:27851561-27855513:+|nuORF', 'ENST00000461249.1_1_2:27852141-27855513:+|nuORF', 'ENST00000478484.5_1_2:27851925-27854072:+|nuORF'] 39758 13059 HPYLPINSA True PC9_epitope_Rep5 1010.51853035678 1010.51742993586 55.237 2 0.09041013478940622 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 18746 8774 ELDPDNETY True H1975_Epitope_Rep2 1094.44039917538 1094.4398749679299 38.713 1 0.09040837207106976 0.0031327104876493583 0.9438714419765777 ['ENSG00000104969|ENST00000221566|SGTA'] 48439 7451 KEEEEVFQP True H1975_Epitope_Rep2 1133.5240692296898 1133.5229699358601 33.605 2 0.09040064063330878 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000118564|Q9UKA1-2|FBXL5', 'ENSG00000118564|ENST00000341285|FBXL5'] 47616 21983 IYPDSFTVL True PC9_epitope_Rep3 1053.53826274185 1053.5371699358602 89.858 2 0.09039871876590122 0.0031327104876493583 0.9438714419765777 ['RWDD1-FAM26D|1|fusion', 'ENSG00000111832|ENST00000466444|RWDD1'] 40084 17226 HRDDELYIL True PC9_epitope_Rep5 1172.5825871653199 1172.5814899358602 71.277 2 0.09039142015948395 0.0031327104876493583 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 109858 16384 THMELYSQL True PC9_epitope_Rep5 1120.52229540788 1120.52118993586 68.019 2 0.09039090469079226 0.0031327104876493583 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 31966 5208 GESPVPHTV True H1975_Epitope_Rep2 921.45559574705 921.45448993586 25.105 2 0.09038947428243668 0.0031327104876493583 0.9438714419765777 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN'] 108512 12040 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 51.391 1 0.09038789955783598 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 106590 8913 SVYSDIVGK True NCI_RA007_Epitope_Rep3 966.5022115862998 966.50110993586 42.142 2 0.09038703608214477 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 26344 19666 FIFSDTHEL True PC9_epitope_Rep1 1107.52367530687 1107.52256993586 80.469 2 0.09038033351113586 0.0031327104876493583 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 7318 14415 ARSDKPIFTL True PC9_epitope_Rep5 1146.6397081186199 1146.63805490379 60.446 3 0.09036605653606124 0.0031327104876493583 0.9438714419765777 ['ENSG00000136045|ENST00000412830|PWP1'] 26061 10557 FHDPDSAVV True PC9_epitope_Rep1 985.4505103666099 985.44940993586 45.499 2 0.09036540692111633 0.0031327104876493583 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 104300 16638 SSELFTLTY True H1975_Epitope_Rep1 1059.51244191683 1059.51187496793 69.38 1 0.0903530312376158 0.0031327104876493583 0.9438714419765777 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'ENST00000497251.1_1_1:36605278-36614725:-|nuORF'] 25218 9691 FEAPATINSA True H1975_Epitope_Rep1 1019.49237517859 1019.49187496793 42.201 1 0.09034261567996604 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 61944 17546 LLLNNDNLLR True PC9_epitope_Rep4 1196.6877209401998 1196.68662993586 75.507 2 0.09033360116186716 0.0031327104876493583 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2', 'ENST00000485542.5_1_1:113162466-113192092:+|nuORF', 'ENST00000476936.5_1_1:113162466-113209756:+|nuORF'] 17765 5802 EHVASSPAL True PC9_epitope_Rep4 909.4555957470499 909.45448993586 29.173 2 0.09032973682891901 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 27511 20327 FPFAPPAAA True PC9_epitope_Rep3 887.4541391950698 887.45359496793 83.437 1 0.09032533492165479 0.0031327104876493583 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 114268 17332 TSAESFVNV True PC9_epitope_Rep5 952.45017601344 952.44962496793 71.667 1 0.0903178363302208 0.0031327104876493583 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 37757 6056 HAVGPSTSL True PC9_epitope_Rep2 867.4450310633501 867.44392993586 28.688 2 0.0903148031719196 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 131292 20920 VVQPLLVSV True PC9_epitope_Rep2 952.5957180483199 952.59516496793 85.915 1 0.0903119019866676 0.003152742055919688 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 2288 6642 AEPSRGPPLP True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 30.456 2 0.09029824859557252 0.003152742055919688 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 94278 19353 RWSPVRPLVF True PC9_epitope_Rep2 1255.71896149883 1255.7173049037901 79.817 3 0.09028309237204771 0.003152742055919688 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 132484 7948 VYPDGIRHI True PC9_epitope_Rep6 1068.5716285587998 1068.5705299358601 40.017 2 0.09027888641661622 0.003152742055919688 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 107929 10584 TAVTVNQSL True PC9_epitope_Rep6 931.4974605590301 931.49636993586 51.526 2 0.0902699016878119 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 81564 7861 PRIASNAGSIA True PC9_epitope_Rep5 1055.57235683479 1055.5712499358601 35.181 2 0.09026939422612067 0.003152742055919688 0.9438714419765777 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000584583.1_1_17:37006387-37006753:-|nuORF'] 2382 5181 AEQIKHILA True H1975_Epitope_Rep2 1021.5920296502098 1021.59092993586 25.001 2 0.09025711005749955 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000458298.1_1_6:86137181-86137394:-|nuORF', 'ENST00000490277.1_1_13:45913571-45913754:-|nuORF'] 127018 5409 VPYGVGKAA True PC9_epitope_Rep2 860.4756029156398 860.4745099358599 26.2 2 0.0902478009224819 0.003152742055919688 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 21796 13893 ESDLDYIQY True H1975_Epitope_Rep2 1144.4924347482402 1144.49187496793 58.584 1 0.090238605713308 0.003152742055919688 0.9438714419765777 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 87377 6146 QTDLHEHPLY True H1975_Epitope_Rep2 1251.58840082175 1251.58675490379 28.613 3 0.09021861299710032 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF', 'nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 48185 10928 KAVKDLVVL True PC9_epitope_Rep6 983.6379172134698 983.63682993586 52.903 2 0.09021774687296448 0.003152742055919688 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 119840 6251 VEVPETPKA True H1975_Epitope_Rep2 968.5178616504398 968.51731496793 28.999 1 0.09021354600567112 0.003152742055919688 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 103461 5678 SRAPDGAAL True PC9_epitope_Rep1 856.4402800360799 856.43918993586 26.663 2 0.09020560506434924 0.003152742055919688 0.9438714419765777 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 75421 15472 NQFPGFKEV True PC9_epitope_Rep5 1064.52909504048 1064.5279899358602 64.524 2 0.09020283004167357 0.003152742055919688 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000407763.2_1_6:149433147-149433330:-|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2'] 39876 10762 HQIEAVDGEEL True PC9_epitope_Rep6 1238.5778957076998 1238.57678993586 52.224 2 0.09019297026573073 0.003152742055919688 0.9438714419765777 ['ENST00000595226.1_1_19:42461000-42461518:-|nuORF', 'ENSG00000105404|ENST00000222008|RABAC1'] 140613 14214 YYNGKWEFL True NCI_RA007_Epitope_Rep4 1218.5709598524597 1218.5698699358602 61.954 2 0.09019212498186323 0.003152742055919688 0.9438714419765777 ['ENSG00000144843|ENST00000357003|ADPRH'] 68724 16885 LVDEWLDSY True H1975_Epitope_Rep2 1138.51825557326 1138.51714993586 70.193 2 0.09018596016811235 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000416602.6_1_7:66767701-66771051:+|nuORF', 'ENST00000496157.5_1_7:99775584-99786236:+|nuORF'] 114408 8640 TSDSTVYDY True H1975_Epitope_Rep3 1049.41893545481 1049.41837496793 38.229 1 0.0901784210604163 0.003152742055919688 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 116458 7605 TYAEKLHRL True PC9_epitope_Rep3 1129.62439240765 1129.6227449037901 34.25 3 0.09016882314636944 0.003152742055919688 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 1050 8370 AEAILGQNAA True H1975_Epitope_Rep3 956.4927095317599 956.4921649679301 37.178 1 0.090168759475382 0.003152742055919688 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 11979 18103 DHTVGFIL True PC9_epitope_Rep6 900.4705175351999 900.46942993586 82.269 2 0.09015144490824155 0.003152742055919688 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 11 5045 AAAAAAAAAAA True PC9_epitope_Rep6 799.41881631551 799.41770993586 27.036 2 0.09015104938599451 0.003152742055919688 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 109539 9109 THANALTVM True PC9_epitope_Rep4 956.4749512926401 956.47384993586 42.624 2 0.09014854232519842 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1'] 30401 6665 GAFGKPSSL True H1975_Epitope_Rep2 862.45486747106 862.45376993586 30.545 2 0.0901275720659196 0.003152742055919688 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 46825 13410 IVEESVTGV True PC9_epitope_Rep5 931.4862271689899 931.48512993586 56.598 2 0.09012677769529812 0.003152742055919688 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2', 'ENST00000492628.1_1_7:129040195-129045055:+|nuORF'] 115009 21655 TTLPGLLTV True PC9_epitope_Rep2 913.5484335027301 913.54732993586 88.771 2 0.09011448154674405 0.003152742055919688 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 95113 16851 RYVEIVSQF True PC9_epitope_Rep4 1139.5975089534697 1139.59640993586 72.799 2 0.09009556181697442 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 134127 15472 WRDPDEPVL True PC9_epitope_Rep2 1125.5454733806098 1125.54436993586 64.79 2 0.09009368198783269 0.003152742055919688 0.9438714419765777 ['ENSG00000117448|ENST00000351829|AKR1A1', 'ENST00000487654.5_1_1:46033819-46034819:+|nuORF'] 29233 16904 FVDEPLIHA True PC9_epitope_Rep3 1039.5338460677497 1039.53274993586 70.18 2 0.09009337429362332 0.003152742055919688 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 132059 19107 VYIHPSSALF True PC9_epitope_Rep3 1132.59169529704 1132.5905899358602 78.719 2 0.09009006460488905 0.003152742055919688 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8'] 94992 15305 RYQDIIHSI True PC9_epitope_Rep1 1143.6036569630699 1143.60254993586 63.692 2 0.09007545558537895 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 135708 16258 YEIPESLLA True H1975_Epitope_Rep2 1033.5331773614098 1033.53208993586 67.747 2 0.09005897667953969 0.003152742055919688 0.9438714419765777 ['ENSG00000102362|ENST00000372989|SYTL4'] 6015 7304 APLLQPRAA True PC9_epitope_Rep6 935.5552502186699 935.55414993586 37.247 2 0.09005622359136921 0.003152742055919688 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 65032 17678 LSDIYIIPPAY True H1975_Epitope_Rep2 1263.67509056783 1263.6739899358602 73.32 2 0.09004198961493445 0.003152742055919688 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 24258 18726 FAADIISVL True H1975_Epitope_Rep1 947.53278343859 947.53168993586 78.087 2 0.09004172541937215 0.003152742055919688 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 17287 16124 EHDGSLFQAV True PC9_epitope_Rep1 1101.50908787189 1101.50798993586 66.836 2 0.09004070122567061 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 1118 5574 AEAPPPPPP True H1975_Epitope_Rep3 871.44396843419 871.44286993586 26.481 2 0.09003944664150793 0.003152742055919688 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 131778 22238 VYAFSIENF True PC9_epitope_Rep2 1088.5178616504397 1088.51676993586 91.016 2 0.09003490709186548 0.003152742055919688 0.9438714419765777 ['ENST00000528557.5_1_1:26759436-26769365:+|nuORF', 'nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS'] 101776 5335 SPHSQVLTA True PC9_epitope_Rep1 938.4821448480599 938.48104993586 25.36 2 0.09002729632470977 0.003152742055919688 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 86924 9720 QRSDGPYAL True PC9_epitope_Rep3 1005.4879585044899 1005.48686993586 42.341 2 0.09002206571903675 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 44807 2676 IPVEQKEGA True PC9_epitope_Rep5 969.5131106231698 969.51200993586 14.799 2 0.09001991094754452 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 25531 14908 FEQFPPPEI True H1975_Epitope_Rep2 1102.5335117145798 1102.5324099358602 62.496 2 0.09001623417160969 0.003152742055919688 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 73712 7482 NGTDPEDVIR True NCI_RA007_Epitope_Rep1 1114.5254662120199 1114.52436993586 33.095 2 0.09001464759942306 0.003152742055919688 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'ENST00000569826.2_1_15:42864283-42864628:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 1403 14594 AEEFPNLAV True H1975_Epitope_Rep3 988.4865615221598 988.48546993586 61.504 2 0.09000102609648088 0.003152742055919688 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 107454 3620 SYVTTSTR True NCI_RA007_Epitope_Rep5 913.45051036661 913.44940993586 19.892 2 0.08997930653221459 0.003152742055919688 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 130413 11108 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 49.603 2 0.08996333564630797 0.003152742055919688 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 138302 9635 YRAPEAEL True PC9_epitope_Rep2 947.4712458111899 947.47014993586 42.403 2 0.08994188302886653 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000152332|Q8TAS1-3|UHMK1', 'nc|ENSG00000152332|Q8TAS1-2|UHMK1', 'ENSG00000152332|ENST00000489294|UHMK1'] 38189 3381 HESGHAIIA True NCI_RA007_Epitope_Rep4 933.4668291370899 933.4657299358599 18.838 2 0.08993974896215391 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 85510 9169 QLIVGVNK True PC9_epitope_Rep5 869.53345214493 869.53234993586 40.215 2 0.08993631137809073 0.003152742055919688 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 103061 11963 SQLEEGKPGYL True PC9_epitope_Rep1 1219.6084675599898 1219.60736993586 50.881 2 0.08993382525411805 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 128366 13308 VSDPVGVLY True H1975_Epitope_Rep1 947.49639792987 947.4958449679301 56.293 1 0.08992703459052234 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 6822 9231 AQHSVELTL True NCI_RA007_Epitope_Rep4 996.52400966004 996.52290993586 42.358 2 0.08992495253301035 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENSG00000090989|ENST00000381295|EXOC1'] 102669 4523 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44466993586 22.277 2 0.08991782363660114 0.003152742055919688 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 27193 17311 FLSQPILL True H1975_Epitope_Rep3 929.5586042636099 929.55805496793 72.24 1 0.0899073970705649 0.003152742055919688 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 76783 15128 NVDGHLYEL True PC9_epitope_Rep2 1058.5032742154601 1058.5021699358601 63.449 2 0.08990409448323641 0.003152742055919688 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1', 'ENST00000510566.1_1_4:41263775-41266241:+|nuORF'] 16636 6517 EESNYELEGK True PC9_epitope_Rep3 1196.5197121252397 1196.51860993586 30.095 2 0.08990397787525209 0.003152742055919688 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 43623 20312 IIIQTVPTL True PC9_epitope_Rep4 996.62193279616 996.62082993586 86.273 2 0.08990349465782614 0.003152742055919688 0.9438714419765777 ['ENSG00000118217|ENST00000367942|ATF6'] 91793 8850 RPLLKAITA True PC9_epitope_Rep2 981.63350053937 981.63240993586 39.393 2 0.08989581319764747 0.003152742055919688 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 1123 7778 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 34.865 2 0.08989527053554937 0.003152742055919688 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 26286 18441 FIDDANYSV True PC9_epitope_Rep5 1042.4607406971402 1042.4596499358602 75.954 2 0.08988814157553514 0.003152742055919688 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 1911 10307 AEINATMSV True H1975_Epitope_Rep2 934.4429824580201 934.44243496793 44.652 1 0.0898875491232279 0.003152742055919688 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF'] 21021 11639 ERATNIEVL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 50.096 2 0.08987237975120052 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1'] 76948 21106 NVPEGLLATV True PC9_epitope_Rep1 1011.56006081559 1011.5594749679301 86.012 1 0.08986829110560983 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 15211 18877 EAFQLFDR True PC9_epitope_Rep3 1024.4977949121999 1024.49668993586 77.834 2 0.08986215645724877 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549017.5_1_12:56552185-56553840:+|nuORF'] 72548 21362 MVGEGFIEV True PC9_epitope_Rep5 979.4684689298699 979.46736993586 87.228 2 0.08986096952933502 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 97635 7547 SHANSAVVL True PC9_epitope_Rep5 896.47158016436 896.47048993586 33.98 2 0.08985990070532378 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 35677 4042 GTNPGIITK True NCI_RA007_Epitope_Rep3 899.50763131991 899.50652993586 22.363 2 0.08985760579058459 0.003152742055919688 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 35031 16662 GRAPVLVAL True PC9_epitope_Rep5 894.5650866263799 894.56398993586 69.095 2 0.08985518226119435 0.003152742055919688 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'ENST00000534330.1_1_11:133993775-133993928:-|nuORF', 'ENST00000532001.6_1_1:32374455-32378590:-|nuORF'] 17784 13706 EHVPGADIL True PC9_epitope_Rep4 949.4868958753299 949.48578993586 60.608 2 0.08985407240907883 0.003152742055919688 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 108445 11411 TEELAYLK True PC9_epitope_Rep2 965.50696261357 965.50586993586 49.214 2 0.08983554270601199 0.003152742055919688 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 9383 14633 AVVESMVTA True PC9_epitope_Rep1 905.4528188657299 905.45172993586 61.109 2 0.08982629740125324 0.003152742055919688 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 117109 15689 TYSHGNYLF True PC9_epitope_Rep1 1100.49270953176 1100.4916099358602 65.17 2 0.08982614430554718 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 2010 14718 AELADVLTEA True H1975_Epitope_Rep2 1030.51825557326 1030.51714993586 61.773 2 0.0898178726974769 0.003152742055919688 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant', 'ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 23646 14911 EYGKFFVTL True NCI_RA007_Epitope_Rep4 1102.5698972233 1102.5688099358601 64.818 2 0.08981649806664035 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 35899 23018 GVAGTDIFLVV True PC9_epitope_Rep2 1089.60701100801 1089.6059099358602 94.032 2 0.08981547156761512 0.003152742055919688 0.9438714419765777 ['ENST00000481918.1_1_1:213186656-213188829:-|nuORF'] 21281 17013 ERIPDVAAL True PC9_epitope_Rep1 982.5447451046199 982.54364993586 70.264 2 0.08981504943368147 0.003152742055919688 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 119638 7549 VESEPAMTP True H1975_Epitope_Rep2 959.4269980407099 959.42644496793 33.989 1 0.08979647192553374 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000498066.1_1_2:102484451-102486985:+|nuORF'] 77020 23249 NVVEALIAL True PC9_epitope_Rep1 940.5593325395998 940.55822993586 94.215 2 0.08979370926959704 0.003152742055919688 0.9438714419765777 ['ENSG00000242028|ENST00000442995|HYPK', 'ENST00000458412.1_2_15:44093902-44094001:+|nuORF'] 1717 11499 AEGPVAVVV True H1975_Epitope_Rep3 839.4752685624699 839.47472496793 49.355 1 0.08976761616703408 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 17650 12089 EHQPSVLL True PC9_epitope_Rep5 921.4919812557699 921.49088993586 51.495 2 0.08976324042603746 0.003152742055919688 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT'] 96903 8718 SETEYVIRC True H1975_Epitope_Rep3 1098.5015599633 1098.50046993586 38.535 2 0.0897629841334863 0.003152742055919688 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 23703 11941 EYIKFLRSI True NCI_RA007_Epitope_Rep5 1167.6651945904698 1167.66355490379 52.587 3 0.08974864676931317 0.003152742055919688 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 131826 21997 VYAPPVGGFSF True PC9_epitope_Rep5 1139.56514619603 1139.56457496793 89.638 1 0.08974621675057226 0.003152742055919688 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 12613 12792 DLEALLNSK True H1975_Epitope_Rep1 1001.53932537101 1001.53822993586 54.268 2 0.08974401895686207 0.003152742055919688 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 101018 13267 SLTGRLDEV True PC9_epitope_Rep1 988.5189242795999 988.51782993586 55.896 2 0.08973976606221094 0.003152742055919688 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6'] 31620 5122 GEGPPANPP True H1975_Epitope_Rep3 834.38718183406 834.38608993586 24.812 2 0.08973970335169251 0.003152742055919688 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19', 'nc|ENSG00000109686|Q5HYK7-3|SH3D19', 'nc|ENSG00000109686|Q5HYK7-2|SH3D19', 'nc|ENSG00000109686|Q5HYK7|SH3D19'] 10099 18412 AYVPGFAHI True PC9_epitope_Rep1 973.5021520166499 973.50104993586 75.612 2 0.08973659297806666 0.003152742055919688 0.9438714419765777 ['CUEDC2|p.V149Wfs*35|1|0.4|ENSG00000107874|chr10:102424145-102424145|C/-|frameshift_variant', 'ENST00000477994.1_1_10:104183924-104192326:-|nuORF', 'ENSG00000107874|ENST00000369937|CUEDC2'] 106082 18890 SVMGNIIHV True PC9_epitope_Rep1 968.51133680136 968.51022993586 77.445 2 0.08973392203345551 0.0031763568567877366 0.9438714419765777 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 101017 9948 SLTGHISTV True PC9_epitope_Rep5 913.4868958753301 913.48578993586 43.238 2 0.08973234962250258 0.0031763568567877366 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 49462 18627 KIVDFSYSV True PC9_epitope_Rep5 1056.5491617787202 1056.5480699358602 76.674 2 0.08972768750692624 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000156970|O60566-3|BUB1B', 'nc|ENSG00000156970|O60566-2|BUB1B', 'MARK2-BUB1B|1|fusion', 'ENSG00000156970|ENST00000287598|BUB1B', 'ENST00000453867.6_3_15:40509736-40545453:+|nuORF'] 28262 13955 FRVKYETEL True PC9_epitope_Rep1 1183.62372370131 1183.62208490379 58.514 3 0.08972764285568749 0.0031763568567877366 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 91607 21071 RPDSFVLIL True PC9_epitope_Rep2 1058.61243074162 1058.61132993586 86.506 2 0.08972700202476944 0.0031763568567877366 0.9438714419765777 ['ENSG00000137193|ENST00000373509|PIM1', 'nc|ENSG00000137193|P11309-2|PIM1'] 119125 7665 VEILANDQGNR True PC9_epitope_Rep1 1227.6207635791898 1227.6191249037902 34.306 3 0.08972578264713243 0.0031763568567877366 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 101856 9134 SPKQILDPA True PC9_epitope_Rep5 967.5338460677499 967.53274993586 40.079 2 0.089719802522474 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant'] 57187 8221 LEESSPIAA True H1975_Epitope_Rep2 915.4549270407099 915.4543749679301 36.576 1 0.08971305452865351 0.0031763568567877366 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 100438 12182 SLPEELQKC True PC9_epitope_Rep2 1045.51139637101 1045.51028993586 52.17 2 0.08970846442098822 0.0031763568567877366 0.9438714419765777 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 87106 6205 QSEVESTEY True H1975_Epitope_Rep3 1070.44039917538 1070.4398749679299 28.88 1 0.08970613240721258 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 2213 7647 AENVAVPEA True H1975_Epitope_Rep1 898.4396113297399 898.43850993586 34.392 2 0.08969944151550517 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 87444 11050 QTELGNQLEY True H1975_Epitope_Rep3 1193.5564319871298 1193.5558749679299 47.594 1 0.08968494014509266 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2', 'nc|ENSG00000149930|Q9UL54-2|TAOK2', 'nc|ENSG00000149930|Q9UL54-4|TAOK2'] 14851 14029 DYFEEYGK True PC9_epitope_Rep5 1049.4341915961297 1049.4330899358602 58.979 2 0.08968122054857769 0.0031763568567877366 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 103137 20815 SQMPTVIYV True PC9_epitope_Rep1 1036.5263181591597 1036.5252299358601 84.893 2 0.08967261903799437 0.0031763568567877366 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 84980 5636 QIDREHQNFY True H1975_Epitope_Rep3 1348.61601255192 1348.6143749037901 26.716 3 0.08967187893075373 0.0031763568567877366 0.9438714419765777 ['ENSG00000165895|ENST00000298815|ARHGAP42'] 90157 16904 RHDDYLVML True PC9_epitope_Rep4 1160.5648289262 1160.56372993586 73.005 2 0.0896612828382427 0.0031763568567877366 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF', 'ENST00000555319.1_1_14:52466454-52468602:+|nuORF'] 48205 15150 KAYTSQFVSL True PC9_epitope_Rep4 1142.5971746003 1142.5960699358602 66.201 2 0.08965582206649049 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 54188 8114 KYPDRVPVI True NCI_RA007_Epitope_Rep5 1085.62332977849 1085.62222993586 37.896 2 0.08964737124890783 0.0031763568567877366 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 17181 8137 EHAGGEVEL True PC9_epitope_Rep3 939.42977492203 939.42866993586 36.278 2 0.08963789106584005 0.0031763568567877366 0.9438714419765777 ['ENSG00000218891|ENST00000325421|ZNF579'] 6093 12798 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 54.528 2 0.08962706120446043 0.0031763568567877366 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 57051 5778 LEEGSVEA True H1975_Epitope_Rep2 832.3814277472799 832.38087496793 27.219 1 0.08961174570909816 0.0031763568567877366 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 45227 16103 IRLENEIQTY True PC9_epitope_Rep3 1277.66156576201 1277.6604699358602 67.091 2 0.08961153440309891 0.0031763568567877366 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 83871 12568 QEIATVVVP True H1975_Epitope_Rep1 954.5385970950199 954.53750993586 53.389 2 0.08959858498916703 0.0031763568567877366 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 22307 15812 ETEEDKFLLLY True H1975_Epitope_Rep1 1398.6918628307799 1398.69127496793 66.127 1 0.08959463106206807 0.0031763568567877366 0.9438714419765777 ['ENST00000446987.5_1_7:44605603-44612175:-|nuORF', 'nc|ENSG00000136271|Q9NY93-2|DDX56', 'ENSG00000136271|ENST00000258772|DDX56'] 95232 13663 SADDTYLQL True NCI_RA007_Epitope_Rep4 1024.47130538084 1024.47020993586 59.776 2 0.08958607208448084 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7'] 86243 10654 QPYM[Oxidation]PTVSA True PC9_epitope_Rep2 1008.4586329025999 1008.45752993586 46.292 2 0.08958225812473662 0.0031763568567877366 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 74678 21412 NLIDLDDLYV True PC9_epitope_Rep6 1191.6023195503901 1191.60177496793 95.235 1 0.08958109453637303 0.0031763568567877366 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 93838 5967 RVFDVPIRR True NCI_RA007_Epitope_Rep3 1156.68291034328 1156.68127490379 30.452 3 0.08957706087160472 0.0031763568567877366 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3'] 6010 9109 APLLQPRAA True PC9_epitope_Rep3 935.5552502186699 935.55414993586 39.977 2 0.08955942417619907 0.0031763568567877366 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 73613 21826 NGFPVFATV True PC9_epitope_Rep5 950.48616759934 950.48561496793 88.985 1 0.08955110035935804 0.0031763568567877366 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 24052 19912 EYQELMNVKL True PC9_epitope_Rep1 1265.6325741328499 1265.6314699358602 81.41 2 0.08954360831690626 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446'] 124644 18762 VLIENVASL True PC9_epitope_Rep6 956.5542471591599 956.55314993586 84.808 2 0.08954355303630888 0.0031763568567877366 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 32992 8413 GIVEFSGK True PC9_epitope_Rep6 835.44396843419 835.44286993586 42.044 2 0.08954295002340683 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 2233 7726 AENVAVPEA True NCI_RA007_Epitope_Rep4 898.4396113297399 898.43850993586 36.39 2 0.08952742117691614 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 90949 7340 RLFVGSIPK True NCI_RA007_Epitope_Rep3 1015.6178504752298 1015.61674993586 35.996 2 0.08952119695829075 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 41415 5561 IASNAGSIA True NCI_RA007_Epitope_Rep5 802.41848196234 802.41793496793 28.075 1 0.08950463503655326 0.0031763568567877366 0.9438714419765777 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000584583.1_1_17:37006387-37006753:-|nuORF'] 135679 4912 YEHFNSPHP True H1975_Epitope_Rep3 1126.4832074772198 1126.48156490379 24.021 3 0.0894978887558265 0.0031763568567877366 0.9438714419765777 ['ENST00000521970.1_1_5:133473560-133474730:+|nuORF', 'nc|ENSG00000081059|P36402-10|TCF7', 'nc|ENSG00000081059|P36402-11|TCF7', 'ENSG00000081059|ENST00000342854|TCF7', 'nc|ENSG00000081059|P36402|TCF7', 'nc|ENSG00000081059|P36402-7|TCF7', 'nc|ENSG00000081059|P36402-4|TCF7', 'nc|ENSG00000081059|P36402-12|TCF7', 'nc|ENSG00000081059|P36402-15|TCF7', 'nc|ENSG00000081059|P36402-13|TCF7', 'nc|ENSG00000081059|P36402-9|TCF7', 'nc|ENSG00000081059|P36402-2|TCF7', 'nc|ENSG00000081059|P36402-6|TCF7', 'nc|ENSG00000081059|P36402-8|TCF7', 'ENST00000522653.5_1_5:133451068-133478640:+|nuORF', 'nc|ENSG00000081059|P36402-16|TCF7', 'nc|ENSG00000081059|P36402-14|TCF7', 'nc|ENSG00000081059|P36402-3|TCF7'] 86500 13954 QRAAVIGDVI True PC9_epitope_Rep4 1040.5978433066398 1040.59674993586 61.577 2 0.08949323572143274 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 89419 2762 REPNAEVPRP True H1975_Epitope_Rep3 1163.6047195922297 1163.60308490379 14.707 3 0.0894823445182092 0.0031763568567877366 0.9438714419765777 ['ENSG00000109180|ENST00000264312|OCIAD1', 'ENST00000510824.5_2_4:48833247-48834725:+|nuORF', 'ENST00000507546.5_1_4:48833247-48850510:+|nuORF', 'nc|ENSG00000109180|Q9NX40-3|OCIAD1', 'nc|ENSG00000109180|Q9NX40-2|OCIAD1', 'nc|ENSG00000109180|Q9NX40-4|OCIAD1'] 7491 13228 ASEDSVLLY True H1975_Epitope_Rep2 995.4811417885501 995.4805949679301 56.009 1 0.08947849007017905 0.0031763568567877366 0.9438714419765777 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 47782 9830 IYQRDPLKL True PC9_epitope_Rep6 1144.6604435631998 1144.65934993586 48.276 2 0.08947193918846963 0.0031763568567877366 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 3886 8665 AHDDGRWSL True PC9_epitope_Rep4 1055.47845644995 1055.47734993586 40.82 2 0.08946999672712323 0.0031763568567877366 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 656 13873 AATSLITTL True H1975_Epitope_Rep3 889.5120479940101 889.51149496793 58.671 1 0.08946931149021121 0.0031763568567877366 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 27934 10859 FQPEANPSHL True PC9_epitope_Rep5 1138.54072235334 1138.5396299358601 46.756 2 0.08946894848516612 0.0031763568567877366 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'ENST00000261509.10_1_4:169846154-169847533:+|nuORF'] 130670 15522 VVDAVVTQV True PC9_epitope_Rep3 928.5229470308799 928.52184993586 64.855 2 0.08946381916916686 0.0031763568567877366 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 64157 12370 LQFDKAINA True PC9_epitope_Rep4 1018.5447451046199 1018.54364993586 55.388 2 0.08946199008188643 0.0031763568567877366 0.9438714419765777 ['ENSG00000140307|ENST00000396060|GTF2A2'] 57346 4764 LEHAISPSA True H1975_Epitope_Rep2 923.47124581119 923.47014993586 23.413 2 0.08945177935521613 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000169696|Q9BZE9-3|ASPSCR1', 'ENSG00000169696|ENST00000306739|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-2|ASPSCR1', 'ENST00000585274.1_1_17:79974599-79974746:+|nuORF', 'ENST00000578236.5_1_17:79966858-79974746:+|nuORF', 'ENST00000577733.5_1_17:79966858-79975195:+|nuORF', 'TBCD-ASPSCR1|1|fusion', 'TBCD-ASPSCR1|2|fusion', 'ENST00000578361.5_1_17:79969964-79975195:+|nuORF'] 17400 7096 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.53465490379 32.104 3 0.08943558451591639 0.00319894104020738 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 75593 19729 NQQLPIESQMV True PC9_epitope_Rep5 1285.63363676201 1285.63252993586 80.934 2 0.08942887223034318 0.00319894104020738 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 104714 9974 STDGKHWWEY True H1975_Epitope_Rep1 1307.5571006934701 1307.55544490379 43.302 3 0.08942391117476156 0.00319894104020738 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1', 'RAB3GAP1-CCNT2|2|fusion', 'nc|ENSG00000082258|O60583-2|CCNT2'] 89405 4644 REMPVKVEA True NCI_RA007_Epitope_Rep5 1057.5590152697698 1057.5579099358602 24.542 2 0.08942031200814503 0.00319894104020738 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 98758 20836 SISDVIAQV True PC9_epitope_Rep5 930.5022115863 930.50110993586 85.194 2 0.08941297038407806 0.00319894104020738 0.9438714419765777 ['ENSG00000154122|ENST00000284268|ANKH'] 31589 19324 GEFTFLLPA True H1975_Epitope_Rep2 993.5171333744498 993.51658496793 80.202 1 0.08940912579905423 0.00319894104020738 0.9438714419765777 ['ENSG00000099203|ENST00000214869|TMED1'] 102426 11280 SPVYVGRVV True PC9_epitope_Rep2 974.5549158654999 974.55380993586 48.714 2 0.08940798928024296 0.00319894104020738 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 115323 13046 TVDSYVISY True H1975_Epitope_Rep2 1045.49679185269 1045.4956899358601 55.303 2 0.08940675507475286 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 113694 7752 TRDETNYGI True PC9_epitope_Rep4 1067.4883524273098 1067.48724993586 37.21 2 0.08940042400999819 0.00319894104020738 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 57938 11484 LEQNIQLPA True H1975_Epitope_Rep2 1024.5553097883198 1024.5542099358602 49.228 2 0.08939122700148798 0.00319894104020738 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 6335 5529 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 26.273 2 0.08939047784271571 0.00319894104020738 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 1072 4976 AEALPVSHGA True H1975_Epitope_Rep3 950.4821448480601 950.48104993586 24.268 2 0.08938995246660718 0.00319894104020738 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000542958.5_1_12:64816967-64819028:+|nuORF'] 34561 20558 GQFGVGFYSA True PC9_epitope_Rep5 1031.4712458111896 1031.4706749679299 84.121 1 0.0893837561639278 0.00319894104020738 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 87922 18077 QVPDDLPNV True PC9_epitope_Rep5 995.4923751785899 995.49126993586 74.547 2 0.08937904714334903 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 28715 8389 FSVSPVVR True H1975_Epitope_Rep3 889.5021520166499 889.50104993586 37.251 2 0.08937667052731073 0.00319894104020738 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 27290 24397 FLYPFPLAL True PC9_epitope_Rep5 1079.60555445603 1079.6044499358602 98.878 2 0.08937246780402563 0.00319894104020738 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 52347 10064 KPFGQVIST True PC9_epitope_Rep4 975.5389314481899 975.53782993586 46.379 2 0.08936662473601974 0.00319894104020738 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 135062 20487 YALDLSTFL True H1975_Epitope_Rep3 1041.53826274185 1041.5371699358602 85.641 2 0.08935254741528387 0.00319894104020738 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 90535 8550 RKFDEVVSL True NCI_RA007_Epitope_Rep3 1091.59750895347 1091.59640993586 40.702 2 0.08935196223719429 0.00319894104020738 0.9438714419765777 ['ENSG00000197563|ENST00000640252|PIGN'] 113176 15150 TQDGNIYQL True PC9_epitope_Rep6 1050.4981888350198 1050.49708993586 70.349 2 0.08934616211320083 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 104151 5315 SSAGPGLLK True NCI_RA007_Epitope_Rep5 828.4705175352 828.46942993586 27.137 2 0.08933236749249114 0.00319894104020738 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 45358 8363 ISDGKMQLY True H1975_Epitope_Rep2 1053.51648175145 1053.5153899358602 37.12 2 0.08932561164859744 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000198182|Q96SK3-3|ZNF607', 'ENSG00000198182|ENST00000355202|ZNF607'] 43447 13502 IHSSIVSTL True PC9_epitope_Rep1 955.5338460677501 955.53274993586 56.791 2 0.0893206999187683 0.00319894104020738 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 17338 4846 EHDPVGQM[Oxidation]V True PC9_epitope_Rep4 1026.4440454676198 1026.44294993586 25.226 2 0.08931133952574792 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 133015 15223 VYVQHPITF True PC9_epitope_Rep2 1102.5811306133398 1102.58002993586 63.821 2 0.0893103677240207 0.00319894104020738 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 1098 6151 AEAPPGVET True H1975_Epitope_Rep2 869.41306222873 869.41196993586 28.632 2 0.08930918611951963 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 130445 17185 VTVPPGPSL True PC9_epitope_Rep2 865.49091862661 865.48982993586 71.36 2 0.0893063827772161 0.00319894104020738 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 5178 22267 ALPEIFTEL True PC9_epitope_Rep4 1031.55391280599 1031.55337496793 93.89 1 0.08930218937147082 0.00319894104020738 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 97936 10655 SHQGDYAVL True PC9_epitope_Rep3 988.4614094034798 988.46030993586 45.93 2 0.08929433297396329 0.00319894104020738 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT', 'nc|ENSG00000149313|Q9NRN7-2|AASDHPPT'] 31834 16596 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53274993586 69.063 2 0.08928079491790977 0.00319894104020738 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 57463 10434 LEIVNPQAA True H1975_Epitope_Rep2 953.51819600361 953.51708993586 45.149 2 0.08927889336880415 0.00319894104020738 0.9438714419765777 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 86827 13663 QRPPTIVL True PC9_epitope_Rep5 922.5600012459399 922.55890993586 57.578 2 0.08927576242990777 0.00319894104020738 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 52847 9639 KQYGNEVFL True NCI_RA007_Epitope_Rep3 1096.5553097883198 1096.5542099358602 44.994 2 0.08927369479817264 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 115011 19805 TTLPGLLTV True PC9_epitope_Rep6 913.5484335027301 913.54732993586 88.839 2 0.08926929704528111 0.00319894104020738 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 35557 15729 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.51670993586 65.661 2 0.08926632768614572 0.00319894104020738 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 109507 12703 THAAQQILL True PC9_epitope_Rep3 993.5607295219299 993.55962993586 53.886 2 0.0892636956198781 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 95184 16085 SAAFPGASL True PC9_epitope_Rep6 819.41266830591 819.41156993586 74.203 2 0.08926325111211252 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 2294 6890 AEPSRGPPLP True H1975_Epitope_Rep3 1019.5399940773498 1019.53888993586 31.461 2 0.08925595273248652 0.00319894104020738 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 90455 15435 RISLPLPNF True NCI_RA007_Epitope_Rep4 1055.61276509479 1055.6116699358602 67.04 2 0.08924464430583134 0.00319894104020738 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 115292 17170 TVDPASLWEY True H1975_Epitope_Rep1 1179.54480467427 1179.54427496793 71.495 1 0.08924018346949998 0.00319894104020738 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 86209 9535 QPVSGTQVV True PC9_epitope_Rep3 913.48689587533 913.48578993586 41.622 2 0.08923841950574726 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 2041 15243 AELEFAIQP True H1975_Epitope_Rep2 1016.5178616504397 1016.51676993586 63.79 2 0.089233084221039 0.00319894104020738 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR', 'ENST00000476189.1_1_6:159209469-159239197:-|nuORF', 'ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'RDX|p.E461Kfs*3|1|0.1|ENSG00000137710|chr11:110233447-110233447|G/-|frameshift_variant', 'nc|ENSG00000137710|P35241-3|RDX', 'ENSG00000147065|ENST00000360270|MSN'] 74723 23710 NLLDLLTEV True PC9_epitope_Rep4 1028.57537652656 1028.57426993586 99.558 2 0.08923288275931765 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 35021 16096 GRAPQVLVL True PC9_epitope_Rep3 951.5865503469499 951.58544993586 67.062 2 0.0892290085837243 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 104334 13191 SSEQTFMYY True H1975_Epitope_Rep3 1154.4590264449798 1154.4579299358602 55.991 2 0.08920857395162854 0.00319894104020738 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 28482 11552 FSEVNMQEY True H1975_Epitope_Rep2 1145.46992548185 1145.4688299358602 49.496 2 0.08920613586552618 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 138218 16238 YQTEIGQTL True PC9_epitope_Rep1 1051.51858992643 1051.51807496793 67.277 1 0.08920514436541378 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 98407 21597 SIIGRLLEV True PC9_epitope_Rep5 998.6124307416198 998.61132993586 88.113 2 0.08920134819736761 0.00319894104020738 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 91536 12324 RPADVIFAT True PC9_epitope_Rep6 988.5341804209199 988.53308993586 58.801 2 0.08919961883861352 0.00319894104020738 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 130450 17389 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 72.057 2 0.08919277157729129 0.00319894104020738 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 102815 21099 SQFPGAITL True PC9_epitope_Rep1 932.4967322830399 932.49618496793 85.989 1 0.08916166150727348 0.00319894104020738 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 47766 10743 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65880490379 46.641 3 0.08915754546435764 0.00319894104020738 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 47395 9082 IYIKHPHLF True NCI_RA007_Epitope_Rep4 1166.66004964038 1166.6589499358602 41.767 2 0.08915562137096107 0.00319894104020738 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 34522 5854 GQEDHYNNL True PC9_epitope_Rep2 1088.45230127176 1088.45120993586 27.915 2 0.08915262660653317 0.00319894104020738 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 97655 6290 SHDAAGAAVL True PC9_epitope_Rep4 910.45084471978 910.44974993586 31.253 2 0.08915026425340485 0.00319894104020738 0.9438714419765777 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENST00000496023.1_1_7:4798670-4799378:+|nuORF'] 115917 14798 TVPKPDVVVQV True PC9_epitope_Rep2 1179.68632395787 1179.6852299358602 62.184 2 0.08914735683943203 0.00319894104020738 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 6088 10765 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 46.725 2 0.08914251382362777 0.0032231404958677685 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 114363 8941 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4445749679298 39.351 1 0.08913485603661095 0.0032231404958677685 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 97904 6445 SHMEGVASV True PC9_epitope_Rep2 915.4120166829099 915.41090993586 30.205 2 0.08913213129033576 0.0032231404958677685 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 76624 18248 NTIDNFTHGL True PC9_epitope_Rep5 1130.5356369729 1130.53452993586 75.205 2 0.08913132325887207 0.0032231404958677685 0.9438714419765777 ['nc|ENSG00000165915|Q96H72-2|SLC39A13', 'ENSG00000165915|ENST00000362021|SLC39A13'] 122825 7246 VGVNGFGR True PC9_epitope_Rep4 804.4242360491198 804.42312993586 35.177 2 0.08913121644656216 0.0032231404958677685 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 73748 8549 NHANGLTL True PC9_epitope_Rep5 838.4297153523801 838.4291649679301 37.828 1 0.08912604394435246 0.0032231404958677685 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 9803 13243 AYLHTTTTF True PC9_epitope_Rep3 1053.51311062317 1053.51200993586 55.972 2 0.08912166508801507 0.0032231404958677685 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 117113 15590 TYSHGNYLF True PC9_epitope_Rep5 1100.49270953176 1100.4916099358602 64.976 2 0.0891146765287691 0.0032231404958677685 0.9438714419765777 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 94826 12651 RYLTVATVF True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 57.006 2 0.08910701688426444 0.0032231404958677685 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 99571 19178 SLFGGSVKL True PC9_epitope_Rep1 906.51746772762 906.51636993586 78.563 2 0.08909767263915806 0.0032231404958677685 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000477798.5_1_3:33840175-33866683:+|nuORF'] 67198 9526 LTDINEAY True H1975_Epitope_Rep3 937.43927697657 937.43872496793 41.648 1 0.08909545471595458 0.0032231404958677685 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 73157 8902 NEDLRSWTA True H1975_Epitope_Rep2 1090.50433684462 1090.50377496793 39.208 1 0.0890800770750855 0.0032231404958677685 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 14595 13786 DVIEEYFK True NCI_RA007_Epitope_Rep1 1041.50187723313 1041.5007899358602 57.642 2 0.08906994307348515 0.0032231404958677685 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12'] 17239 7763 EHALGTPEV True PC9_epitope_Rep6 951.4661604307499 951.46506993586 39.223 2 0.08906659418282684 0.0032231404958677685 0.9438714419765777 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX', 'nc|ENSG00000114439|Q8WY36-3|BBX'] 116504 18563 TYDRVESLF True PC9_epitope_Rep2 1128.54513902744 1128.5440499358601 76.754 2 0.08906132290810552 0.0032231404958677685 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 135504 13677 YEDSGIPLP True H1975_Epitope_Rep1 989.4705771048499 989.47002496793 57.744 1 0.08905200111501214 0.0032231404958677685 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 1961 10735 AEIQGVIDA True H1975_Epitope_Rep2 914.4709114580199 914.4703649679301 46.319 1 0.08905119659912877 0.0032231404958677685 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 131901 15394 VYEGPELNHAF True PC9_epitope_Rep4 1274.59315184902 1274.5920499358601 67.146 2 0.08904799826541111 0.0032231404958677685 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant'] 44822 19958 IPVSGITVV True PC9_epitope_Rep1 883.53786881903 883.53676993586 81.592 2 0.08904210433101882 0.0032231404958677685 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 1514 10540 AEEPVFAAA True H1975_Epitope_Rep3 903.4337976733099 903.43324496793 45.608 1 0.08903730297405597 0.0032231404958677685 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 19362 6428 ELNITAAK True PC9_epitope_Rep4 858.4810822188999 858.47998993586 31.821 2 0.08902690247200203 0.0032231404958677685 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 75962 7608 NRGPAYGL True PC9_epitope_Rep2 846.4348007328199 846.43370993586 34.636 2 0.08900702895254108 0.0032231404958677685 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENST00000592923.5_1_19:11649661-11650145:+|nuORF', 'ENST00000588468.1_1_19:11649742-11652758:+|nuORF', 'CNN1|p.Q216Rfs*4|1|0.2|ENSG00000130176|chr19:11549466-11549466|C/-|frameshift_variant', 'ENSG00000130176|ENST00000252456|CNN1'] 10107 17833 AYVTQNITV True PC9_epitope_Rep5 1007.52876068731 1007.52766993586 73.614 2 0.08900405560709354 0.0032231404958677685 0.9438714419765777 ['ZNF384|p.S83Y|1|0.13|ENSG00000126746|chr12:6679002-6679002|G/T|missense_variant'] 74913 19844 NLSEGVLSV True PC9_epitope_Rep5 916.48656152216 916.48601496793 81.377 1 0.08900331247584954 0.0032231404958677685 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000531161.5_1_11:44146432-44228372:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 35681 4032 GTNPGIITK True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 21.932 2 0.08899857694060151 0.0032231404958677685 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 71921 8510 MPRQLSAAAA True PC9_epitope_Rep5 1014.5280494946599 1014.52694993586 37.676 2 0.08899707969154907 0.0032231404958677685 0.9438714419765777 ['ENSG00000078081|ENST00000265598|LAMP3'] 20705 20252 EQISQFLQA True PC9_epitope_Rep2 1062.53457434374 1062.53346993586 83.319 2 0.08899437479283967 0.0032231404958677685 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 38649 9256 HHMGGMAGL True PC9_epitope_Rep3 909.3949271501299 909.39382993586 40.548 2 0.08899183386712509 0.0032231404958677685 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 53746 12832 KYFDEHYEY True PC9_epitope_Rep1 1292.53496826656 1292.5338699358601 54.233 2 0.08899029248738377 0.0032231404958677685 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 27801 12203 FQEPNANSV True PC9_epitope_Rep5 1004.4563240230399 1004.45522993586 51.924 2 0.0889864996025385 0.0032231404958677685 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122', 'ENST00000480931.1_1_3:128580492-128584319:-|nuORF', 'ENST00000448668.2_1_3:129200375-129202705:+|nuORF'] 75845 11685 NRDLATPVM True PC9_epitope_Rep3 1015.51206507735 1015.51096993586 49.966 2 0.08898367586778652 0.0032231404958677685 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 118566 5085 VEAAAELSAK True H1975_Epitope_Rep1 987.5236753068699 987.52256993586 24.631 2 0.08897068179000273 0.0032231404958677685 0.9438714419765777 ['ENSG00000159335|ENST00000309083|PTMS'] 127983 18950 VRPVALVL True PC9_epitope_Rep3 865.5749230340899 865.57382993586 78.116 2 0.08896803042686295 0.0032231404958677685 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D'] 113761 7785 TRDPQFQKL True PC9_epitope_Rep3 1131.6036569630699 1131.60254993586 34.939 2 0.0889660283829014 0.0032231404958677685 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 139756 11297 YVADLVHSA True PC9_epitope_Rep2 973.4868958753299 973.48578993586 48.777 2 0.08896056661111713 0.0032231404958677685 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 14044 17572 DSDFFTSYY True H1975_Epitope_Rep2 1143.43967089939 1143.4390749679299 72.902 1 0.08895866618330192 0.0032231404958677685 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 38882 16594 HIIENIVAV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 71.804 2 0.08895723618547091 0.0032231404958677685 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 120310 15410 VFPEKGYSF True PC9_epitope_Rep2 1072.5229470308798 1072.52184993586 64.555 2 0.08895651761158205 0.0032231404958677685 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 90713 5153 RKNQGDFSL True NCI_RA007_Epitope_Rep5 1063.5410567065098 1063.53994993586 26.516 2 0.08893876014898511 0.003246485267009657 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF'] 103587 9084 SRDGM[Oxidation]NIVL True PC9_epitope_Rep4 1019.5069800773499 1019.50588993586 42.529 2 0.08893378563557573 0.003246485267009657 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 105764 18877 SVIDNDNYL True PC9_epitope_Rep5 1051.48220441771 1051.48110993586 77.63 2 0.08892618609566248 0.003246485267009657 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 102746 4841 SQEGRPVQV True PC9_epitope_Rep1 998.5145076054997 998.51340993586 23.49 2 0.08891269668463432 0.003246485267009657 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 109635 15622 THDITTISI True PC9_epitope_Rep5 999.52367530687 999.52317496793 65.1 1 0.08890336060597809 0.003246485267009657 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 31357 5409 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 25.839 2 0.0889013620533871 0.003246485267009657 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 6546 10311 APVLPHTAV True PC9_epitope_Rep2 903.51780208079 903.51670993586 44.99 2 0.0889005389366879 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'ENST00000471231.6_1_16:30937150-30941463:+|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B', 'nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 140429 18909 YYFEGIKQTF True PC9_epitope_Rep4 1294.6233893481397 1294.6228749679299 80.82 1 0.08889984877387822 0.003246485267009657 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 52601 15274 KQADPFASL True PC9_epitope_Rep2 975.5025459394699 975.50144993586 64.027 2 0.08889342384178434 0.003246485267009657 0.9438714419765777 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 89084 4524 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6032899358602 22.523 2 0.08888604646996869 0.003246485267009657 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 103255 12856 SQSTVKVLI True PC9_epitope_Rep3 973.5807962601699 973.57968993586 54.469 2 0.08888551310463011 0.003246485267009657 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 43519 19803 IIDETMAQL True PC9_epitope_Rep5 1032.5161473982798 1032.5150499358601 81.22 2 0.088876092920841 0.003246485267009657 0.9438714419765777 ['ENSG00000072501|ENST00000322213|SMC1A'] 6827 18159 AQIDGTLSTI True PC9_epitope_Rep2 1017.5342399905701 1017.53314993586 75.153 2 0.0888755467583524 0.003246485267009657 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 73961 15927 NHM[Oxidation]AVAFVL True PC9_epitope_Rep4 1016.5113371818 1016.51022993586 69.191 2 0.08886976848137776 0.003246485267009657 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 138531 12462 YRLLPGPSA True PC9_epitope_Rep6 972.5392658013599 972.53816993586 59.361 2 0.08886642260587943 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 132514 15199 VYPESFREL True PC9_epitope_Rep4 1138.56587447202 1138.56476993586 66.386 2 0.08886289211364559 0.003246485267009657 0.9438714419765777 ['ENSG00000008513|ENST00000522652|ST3GAL1'] 61123 13811 LLDDTGLAY True H1975_Epitope_Rep2 979.4862271689899 979.4856749679301 58.271 1 0.08885979094721566 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000144580|Q92600-3|CNOT9', 'ENSG00000144580|ENST00000273064|CNOT9', 'nc|ENSG00000144580|Q92600-2|CNOT9', 'ENST00000473626.1_1_2:219457053-219457431:+|nuORF'] 17228 13410 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 63.258 2 0.08885837831675748 0.003246485267009657 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 7494 13148 ASEDSVLLY True H1975_Epitope_Rep3 995.4811417885501 995.4805949679301 55.822 1 0.08885740711821533 0.003246485267009657 0.9438714419765777 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 115060 18305 TTSDIDYAL True PC9_epitope_Rep1 997.46040634397 997.45930993586 75.198 2 0.08885087357413267 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 73988 12902 NHQGATPLVL True PC9_epitope_Rep3 1048.56654317836 1048.5654499358602 54.648 2 0.08884888817760941 0.003246485267009657 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 53563 15383 KVSGVILSV True PC9_epitope_Rep5 900.5644179200399 900.56332993586 64.179 2 0.08884110358188657 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000564968.1_1_16:1507514-1509320:-|nuORF', 'ENST00000563822.1_1_16:1505719-1509320:-|nuORF'] 62785 13738 LMDHTIPEV True PC9_epitope_Rep6 1053.51648175145 1053.5153899358602 64.635 2 0.08884059920361141 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 21913 11281 ESGDLLVSY True H1975_Epitope_Rep2 981.46549172441 981.46494496793 48.439 1 0.08883663213526326 0.003246485267009657 0.9438714419765777 ['PCDHGB2|p.D88Y|1|0.09|ENSG00000253910|chr5:141360397-141360397|G/T|missense_variant'] 89113 12334 REFEMWAP True NCI_RA007_Epitope_Rep3 1064.4749512926398 1064.47384993586 55.702 2 0.08883110314803117 0.003246485267009657 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENSG00000116254|ENST00000262450|CHD5'] 70900 13930 MEIPTTIQC True H1975_Epitope_Rep3 1034.47765371458 1034.4770749679299 58.895 1 0.08882843615457338 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 140833 13462 YYTDIMHTL True NCI_RA007_Epitope_Rep5 1155.5270464351497 1155.5259499358601 58.467 2 0.08882534091193664 0.003246485267009657 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 41485 4255 IC[Carbamidomethyl]DNQDTISSK True NCI_RA007_Epitope_Rep2 1279.5714307076998 1279.5703299358602 21.189 2 0.08881364373682973 0.003246485267009657 0.9438714419765777 ['CON__P02769'] 106936 17189 SYKNGFLNL True PC9_epitope_Rep4 1054.54474510462 1054.54364993586 74.122 2 0.08880981040210603 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 85965 18697 QPFGDHIISV True PC9_epitope_Rep1 1111.56620882519 1111.5651099358602 76.709 2 0.08880926870369836 0.003246485267009657 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 7327 4817 ARSTDQTVL True PC9_epitope_Rep2 989.51417325233 989.51306993586 23.897 2 0.08879524886313735 0.003246485267009657 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 37458 18517 GYADIVQLL True NCI_RA007_Epitope_Rep3 990.5385970950199 990.5380449679301 81.029 1 0.08879494093442214 0.003246485267009657 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 35784 8388 GTVVTGTLER True PC9_epitope_Rep1 1031.56112344475 1031.56002993586 37.101 2 0.08879209770998027 0.003246485267009657 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 47837 9307 IYSTKLYRF True NCI_RA007_Epitope_Rep4 1189.6495445263297 1189.64788490379 42.654 3 0.0887895140060021 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENSG00000148925|ENST00000278174|BTBD10', 'ENST00000549824.1_1_12:53143198-53143681:+|nuORF'] 75743 16377 NRAATLMML True PC9_epitope_Rep4 1019.5256069665099 1019.52450993586 70.956 2 0.08878716596993048 0.003246485267009657 0.9438714419765777 ['ENSG00000168259|ENST00000457167|DNAJC7', 'nc|ENSG00000168259|Q99615-2|DNAJC7'] 11949 8126 DHSQAVTL True PC9_epitope_Rep5 869.42429561877 869.42318993586 36.195 2 0.08878403316457265 0.003246485267009657 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 135045 15191 YAITTLHNL True PC9_epitope_Rep4 1044.5603951687601 1044.55928993586 66.355 2 0.08878382588833929 0.003246485267009657 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000168036|ENST00000349496|CTNNB1', 'ENSG00000173801|ENST00000393931|JUP'] 29373 24505 FVEPFVILL True PC9_epitope_Rep5 1075.63176920387 1075.6306699358602 99.34 2 0.08878059615699999 0.003246485267009657 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'nc|ENSG00000196296|O14983|ATP2A1', 'ENSG00000196296|ENST00000395503|ATP2A1'] 1950 11969 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47511496793 51.197 1 0.08876812762085903 0.003246485267009657 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 133307 15085 WEQFTDAVV True H1975_Epitope_Rep2 1093.50802524273 1093.5069299358602 63.176 2 0.08876285310295719 0.003246485267009657 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG'] 34024 9965 GNLANVIR True PC9_epitope_Rep3 855.49264996211 855.49154993586 43.288 2 0.08874895817100169 0.003246485267009657 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant', 'ENSG00000151475|ENST00000281154|SLC25A31', 'ENST00000418448.1_1_13:57888978-57889152:+|nuORF', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 6347 2535 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 14.684 2 0.08874886918491433 0.003246485267009657 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 1390 8235 AEEFKVPAA True H1975_Epitope_Rep3 960.4916469025998 960.49054993586 36.659 2 0.08874804524462034 0.003246485267009657 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 43691 4564 IINSSITTK True NCI_RA007_Epitope_Rep5 975.5600608155901 975.55896993586 24.215 2 0.08873677646802 0.003246485267009657 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 96106 12152 SEDPTVPLP True H1975_Epitope_Rep2 953.4705771048499 953.47002496793 51.827 1 0.08873455985268047 0.003246485267009657 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 7927 10309 ATDDSLYY True H1975_Epitope_Rep3 946.39199243098 946.39144496793 44.708 1 0.08873175065437162 0.003246485267009657 0.9438714419765777 ['ENSG00000149260|ENST00000648180|CAPN5'] 101997 20684 SPNSYFMDV True PC9_epitope_Rep5 1058.43789707758 1058.43737496793 84.616 1 0.08872372883404316 0.003246485267009657 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 109787 5882 THISSQNSEL True PC9_epitope_Rep3 1114.52546621202 1114.52436993586 27.689 2 0.08868762325719964 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 133270 12150 WEIENNPTV True H1975_Epitope_Rep1 1100.51383889916 1100.51274993586 51.753 2 0.08868624963208876 0.003270219022231993 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF', 'ENSG00000112273|ENST00000510882|HDGFL1'] 129333 9403 VTDTALAY True H1975_Epitope_Rep2 852.4228986364401 852.42235496793 41.133 1 0.08868549966998099 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000127585|Q8N461-2|FBXL16', 'ENSG00000127585|ENST00000397621|FBXL16'] 94915 13694 RYPDRITLI True PC9_epitope_Rep4 1145.65569253593 1145.65405490379 60.563 3 0.08867487297541722 0.003270219022231993 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 32055 6341 GEVPESPEA True H1975_Epitope_Rep3 913.4028914678499 913.40234496793 29.38 1 0.0886731613978401 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 136171 21985 YGIENEVFL True PC9_epitope_Rep5 1082.52842633414 1082.52732993586 89.594 2 0.08867005162869714 0.003270219022231993 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 116719 13836 TYKVISNEF True PC9_epitope_Rep2 1099.5549754351498 1099.5538699358601 58.504 2 0.08865684925432307 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 32209 20307 GFGFVLFK True PC9_epitope_Rep4 913.5061747679299 913.50506993586 86.253 2 0.08865093512479447 0.003270219022231993 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'HNRNPDL|p.A199T|1|0.1|ENSG00000152795|chr4:82428295-82428295|C/T|missense_variant', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 47049 6784 IVSSITAS True H1975_Epitope_Rep3 776.42798401688 776.42743496793 31.049 1 0.08864996461224728 0.003270219022231993 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENST00000442739.1_1_22:21363397-21363730:-|nuORF', 'ENST00000425085.1_1_21:24780104-24780850:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 132499 6985 VYPERSTSY True PC9_epitope_Rep1 1100.51383889916 1100.51274993586 31.673 2 0.08864911094647637 0.003270219022231993 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 135906 10353 YETDNNIVV True H1975_Epitope_Rep3 1065.49785448185 1065.4967499358602 44.877 2 0.08864681679406049 0.003270219022231993 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 1921 6333 AEINGTMNA True H1975_Epitope_Rep2 919.4069313024701 919.4063849679301 29.292 1 0.0886388007695444 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 77459 14858 NYPDEFTKL True PC9_epitope_Rep6 1125.53423999057 1125.5331499358601 69.126 2 0.08863753184074658 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'NF1|p.H1943Rfs*17|3|0.12|ENSG00000196712|chr17:31334853-31334863|ACCTTTGTTTG/-|frameshift_variant', 'NF1|p.R1970Sfs*6|1|0.43|ENSG00000196712|chr17:31334931-31334932|AA/-|frameshift_variant', 'NF1|p.T2108Nfs*12|1|0.16|ENSG00000196712|chr17:31336808-31336809|-/A|frameshift_variant', 'NF1|p.G1807Afs*56|1|0.52|ENSG00000196712|chr17:31327648-31327648|G/-|frameshift_variant', 'nc|ENSG00000196712|P21359-3|NF1', 'NF1|p.I679Dfs*21|1|0.39|ENSG00000196712|chr17:31226459-31226460|-/C|frameshift_variant', 'ENST00000495910.6_1_17:29490228-29576996:+|nuORF', 'NF1|p.R1250Lfs*10|1|0.15|ENSG00000196712|chr17:31235648-31235658|CTCGGCATTTA/-|frameshift_variant', 'nc|ENSG00000196712|P21359-4|NF1', 'nc|ENSG00000196712|P21359-5|NF1'] 47905 13780 IYVNPANTHQF True PC9_epitope_Rep3 1302.6356853673399 1302.63458993586 58.084 2 0.08862383561897814 0.003270219022231993 0.9438714419765777 ['ENSG00000132716|ENST00000368074|DCAF8'] 38886 18457 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58057496793 76.016 1 0.08861948429445868 0.003270219022231993 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 4150 17044 AHVTLLTSL True PC9_epitope_Rep4 953.5545815123301 953.55348993586 73.553 2 0.08861692693203888 0.003270219022231993 0.9438714419765777 ['ENSG00000087510|ENST00000201031|TFAP2C', 'nc|ENSG00000087510|Q92754-2|TFAP2C'] 116910 14774 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47054993586 61.964 2 0.08859373899180004 0.003270219022231993 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 32094 8650 GEYGDSPVP True H1975_Epitope_Rep3 919.3923267841499 919.39177496793 38.268 1 0.08858708342912022 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 130671 15439 VVDAVVTQV True PC9_epitope_Rep5 928.5229470308799 928.52184993586 64.395 2 0.08858399985501955 0.003270219022231993 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 31350 11753 GEAPALVAV True H1975_Epitope_Rep2 825.45961849833 825.4590749679301 50.284 1 0.08857574813638325 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF'] 87618 9412 QTVAVGVIK True PC9_epitope_Rep3 913.5596668927699 913.55856993586 41.14 2 0.08856601237749712 0.003270219022231993 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 1848 9761 AEIEETLQA True H1975_Epitope_Rep1 1002.4869554449798 1002.48637496793 42.476 1 0.08856080515966834 0.003270219022231993 0.9438714419765777 ['ENSG00000176903|ENST00000316836|PNMA1'] 3389 12747 [Acetylation]-AGITTIEAVK True NCI_RA007_Epitope_Rep2 1043.58627587973 1043.5851699358602 54.201 2 0.08855395029686275 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 27909 19924 FQLPIRFNL True PC9_epitope_Rep6 1146.65496425994 1146.65386993586 89.296 2 0.08854822459051655 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3', 'ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000509410.1_1_5:33461160-33466106:+|nuORF'] 126783 16366 VPSPGLPVSA True PC9_epitope_Rep2 922.5123823471799 922.51128993586 68.196 2 0.08854393205869363 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 2626 7587 AESPGVPVA True H1975_Epitope_Rep2 825.4232329896099 825.42212993586 34.135 2 0.08854376548258817 0.003270219022231993 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 136763 19015 YIPTELDQV True PC9_epitope_Rep4 1076.53899101784 1076.5378899358602 81.231 2 0.08853869478364965 0.003270219022231993 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 38647 9096 HHMGGMAGL True PC9_epitope_Rep1 909.3949271501299 909.39382993586 39.839 2 0.08853715823259066 0.003270219022231993 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 126139 10037 VPEWVDTVK True NCI_RA007_Epitope_Rep5 1071.5600608155898 1071.5589699358602 45.246 2 0.08853687353291984 0.003270219022231993 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 21092 5344 ERDPGGITA True PC9_epitope_Rep3 914.4457593393399 914.44466993586 25.633 2 0.08853464228320986 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C', 'ENSG00000099385|ENST00000215115|BCL7C'] 1933 8714 AEIPEEHIP True H1975_Epitope_Rep1 1033.50802524273 1033.5069299358602 38.446 2 0.08852592285850325 0.003270219022231993 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 39998 17521 HQSGFFSAL True PC9_epitope_Rep4 992.4715801643599 992.47048993586 75.399 2 0.08852136186668177 0.003270219022231993 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000120029|ENST00000370033|ARMH3'] 67197 17659 LTDILGIEDY True H1975_Epitope_Rep2 1150.57577044938 1150.5746699358601 73.247 2 0.08852099991337085 0.003270219022231993 0.9438714419765777 ['ENST00000481066.1_1_2:55872466-55874499:-|nuORF', 'ENST00000260604.8_1_2:55870335-55906871:-|nuORF', 'ENSG00000138035|ENST00000447944|PNPT1'] 3067 11452 AGAEGFVRV True PC9_epitope_Rep2 904.4766655447999 904.47556993586 49.369 2 0.08851371472315446 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 38102 7302 HENVSVIP True H1975_Epitope_Rep2 893.4606811274899 893.45958993586 33.025 2 0.08850497169309339 0.003270219022231993 0.9438714419765777 ['ENST00000551440.1_1_12:100594629-100598862:+|nuORF', 'ENST00000550813.5_1_12:100594629-100599999:+|nuORF', 'nc|ENSG00000075089|Q9GZN1-2|ACTR6', 'ENSG00000075089|ENST00000188312|ACTR6'] 112842 5693 TPMPSRPSTTP True NCI_RA007_Epitope_Rep4 1170.57030822946 1170.56920993586 28.51 2 0.08850462170083051 0.003270219022231993 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 43290 19730 IHDPSVFLL True PC9_epitope_Rep4 1039.57023157647 1039.56912993586 84.014 2 0.0884862722639837 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-9|USP54', 'nc|ENSG00000166348|Q70EL1-10|USP54', 'nc|ENSG00000166348|Q70EL1-8|USP54'] 70782 7837 MEEKYIVSA True H1975_Epitope_Rep3 1068.5161473982798 1068.5150499358601 35.121 2 0.08847710626268601 0.003270219022231993 0.9438714419765777 ['ENSG00000168172|ENST00000307602|HOOK3'] 31226 15970 GDLGIEIPAEK True PC9_epitope_Rep2 1140.60265390356 1140.60154993586 66.682 2 0.08847120969262263 0.003270219022231993 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 90972 22253 RLIALLEVL True PC9_epitope_Rep2 1038.68011637862 1038.6790099358602 91.073 2 0.08845838488139908 0.003270219022231993 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 41144 19286 HYQDVSCLQF True PC9_epitope_Rep1 1238.53900810118 1238.5379099358602 78.986 2 0.08845763420867088 0.003270219022231993 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 129181 13550 VTDFIAPGY True H1975_Epitope_Rep2 981.4807478657299 981.47964993586 57.257 2 0.08844899318153072 0.003270219022231993 0.9438714419765777 ['BRD7|p.Y457Hfs*4|1|0.1|ENSG00000166164|chr16:50323658-50323662|CATAC/-|frameshift_variant', 'ENSG00000166164|ENST00000394688|BRD7', 'nc|ENSG00000166164|Q9NPI1-2|BRD7', 'ENST00000299197.6_1_13:95410637-95411129:-|nuORF', 'BRD7|p.K223Sfs*7|2|0.24|ENSG00000166164|chr16:50340012-50340012|C/-|frameshift_variant'] 113808 18425 TRDVAFLL True PC9_epitope_Rep4 933.5283667644899 933.52726993586 78.941 2 0.08843684205544135 0.0032900148050666227 0.9438714419765777 ['ENSG00000164291|ENST00000380009|ARSK'] 140845 14520 YYTDIM[Oxidation]HTL True PC9_epitope_Rep2 1171.5219614351497 1171.5208699358602 61.123 2 0.0884276193761059 0.0032900148050666227 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 16182 9825 EEEYPGITA True H1975_Epitope_Rep2 1007.4447562798298 1007.44364993586 42.777 2 0.08841592495967696 0.0032900148050666227 0.9438714419765777 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 110110 9077 TIAPALVSK True PC9_epitope_Rep2 898.5487678559 898.54766993586 40.258 2 0.08841355660470206 0.0032900148050666227 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 139505 18122 YTIPDEYRI True PC9_epitope_Rep2 1168.57643915572 1168.57534993586 75.008 2 0.08839537138542401 0.0032900148050666227 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF'] 45332 7977 ISDAPAPAY True H1975_Epitope_Rep3 903.43379767331 903.43324496793 35.655 1 0.08838893149358239 0.0032900148050666227 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 59818 9032 LHDINAQM True PC9_epitope_Rep1 940.4436511643601 940.44254993586 39.591 2 0.0883836792319715 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 39529 18945 HPFGFVAV True PC9_epitope_Rep1 872.4544735482399 872.45336993586 77.655 2 0.0883750938982247 0.0032900148050666227 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 117802 17608 VAMLPGLAL True NCI_RA007_Epitope_Rep3 883.5201105799099 883.51956496793 77.216 1 0.08836106765732424 0.0032900148050666227 0.9438714419765777 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 84894 10848 QHSISYTL True PC9_epitope_Rep2 947.47124581119 947.47014993586 47.044 2 0.08835964562320743 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000174516|Q8N2H9-4|PELI3', 'nc|ENSG00000174516|Q8N2H9-3|PELI3', 'nc|ENSG00000174516|Q8N2H9-2|PELI3', 'ENSG00000174516|ENST00000320740|PELI3', 'ENSG00000139946|ENST00000267460|PELI2', 'ENSG00000197329|ENST00000358912|PELI1'] 35585 11031 GTITDDVRV True PC9_epitope_Rep4 974.50327421546 974.50216993586 50.207 2 0.08834969897606687 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 30117 11744 FYQEHPDL True PC9_epitope_Rep1 1047.4661604307498 1047.4650699358601 50.047 2 0.08834535946405946 0.0032900148050666227 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 9919 16146 AYPHNLMTF True PC9_epitope_Rep6 1092.50625142092 1092.5051499358601 74.456 2 0.08833043995578455 0.0032900148050666227 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 11947 8187 DHSQAVTL True PC9_epitope_Rep3 869.42429561877 869.42318993586 36.471 2 0.08832856282320235 0.0032900148050666227 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 29470 22842 FVIDGFDEL True PC9_epitope_Rep3 1053.50187723313 1053.50137496793 93.133 1 0.08832301752071896 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 29821 20293 FVVEHDFIMA True PC9_epitope_Rep1 1206.5743309807401 1206.5732299358601 82.884 2 0.08831557765147768 0.0032900148050666227 0.9438714419765777 ['ENSG00000164163|ENST00000296577|ABCE1', 'ENST00000510321.1_1_4:146044588-146044753:+|nuORF', 'ENST00000515678.5_1_4:146042303-146044753:+|nuORF', 'ENST00000444025.1_1_7:23602199-23602811:-|nuORF'] 106887 7006 SYIGGHEGL True NCI_RA007_Epitope_Rep3 931.43994568291 931.43884993586 34.667 2 0.08831073925310842 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 75701 16644 NQVEALNNL True PC9_epitope_Rep3 1013.5141732523299 1013.51306993586 69.157 2 0.08830488843437362 0.0032900148050666227 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'BIRC6|p.C777*|1|0.3|ENSG00000115760|chr2:32415620-32415621|TG/-|frameshift_variant'] 18333 20221 EIVTTIPTI True PC9_epitope_Rep4 985.56956287013 985.56901496793 85.919 1 0.08830306236397162 0.0032900148050666227 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 61328 8366 LLEEDTPRY True H1975_Epitope_Rep3 1134.5557037111398 1134.55460993586 37.163 2 0.08829437827425667 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 102492 7236 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 35.137 2 0.08828422242830304 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 110142 21893 TIDDGIFEV True PC9_epitope_Rep1 1007.48114178855 1007.48057496793 89.024 1 0.08827861567877358 0.0032900148050666227 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 98859 23720 SIVDFLITA True PC9_epitope_Rep5 977.5433481222899 977.54224993586 96.22 2 0.08827317704619866 0.0032900148050666227 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 18330 20935 EIVTTIPTI True PC9_epitope_Rep2 985.56956287013 985.56901496793 85.974 1 0.08827056991723148 0.0032900148050666227 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 138685 15744 YRTEFTTAL True PC9_epitope_Rep1 1100.55022440788 1100.54912993586 65.384 2 0.08827022423591009 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 138870 14415 YSDPSVLYM True H1975_Epitope_Rep2 1073.47394823313 1073.4733749679299 60.599 1 0.08825972607881319 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Cfs*12|1|0.2|ENSG00000068024|chr2:239053582-239053591|CAGGCAGCGC/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF'] 135242 12426 YAYDGKDYLAL True H1975_Epitope_Rep1 1290.6132185872598 1290.6121299358601 52.833 2 0.08824926400350212 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 29305 16138 FVDPNGKISL True PC9_epitope_Rep2 1088.5866099165999 1088.58550993586 67.332 2 0.08824859624777065 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 34665 23256 GQLDFSEFL True PC9_epitope_Rep3 1054.49712620586 1054.49657496793 94.731 1 0.08823296829502215 0.0032900148050666227 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 27184 17289 FLSQPILL True H1975_Epitope_Rep1 929.5586042636099 929.55805496793 71.963 1 0.08822704113619206 0.0032900148050666227 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 1109 6114 AEAPPPKIP True H1975_Epitope_Rep3 918.51746772762 918.51636993586 28.529 2 0.08822373956927716 0.0032900148050666227 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 6489 5763 APTGDLPRA True PC9_epitope_Rep6 896.4715801643599 896.47048993586 30.339 2 0.0882209421176844 0.0032900148050666227 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 101502 12243 SPAAPVITA True PC9_epitope_Rep2 825.45961849833 825.45852993586 52.403 2 0.08821388710734807 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 76186 15617 NRSYEELVL True PC9_epitope_Rep4 1121.57168812845 1121.5705899358602 67.993 2 0.08820692795252964 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'ENST00000342449.7_2_21:40670494-40684812:-|nuORF', 'ENST00000546823.1_1_12:90313320-90313449:-|nuORF', 'nc|ENSG00000185658|Q9NSI6-4|BRWD1'] 34788 10893 GQTGARIWL True NCI_RA007_Epitope_Rep4 1000.5454138109599 1000.54430993586 48.755 2 0.0882004843976284 0.0032900148050666227 0.9438714419765777 ['ENSG00000183726|ENST00000374358|TMEM50A'] 83717 5584 QEAPPPPPP True H1975_Epitope_Rep3 928.4654321547598 928.4648849679301 26.519 1 0.08819925442890614 0.0032900148050666227 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 1943 12138 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 51.705 1 0.08819660209688593 0.0032900148050666227 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 21474 2612 ERQPGAASL True PC9_epitope_Rep2 927.4773938207899 927.47628993586 14.706 2 0.08819268167185527 0.0032900148050666227 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 108255 4153 TEAPLNPKA True H1975_Epitope_Rep3 939.5025459394699 939.50144993586 21.094 2 0.08818564766500138 0.0032900148050666227 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 34376 12616 GPSVFLFPPK True NCI_RA007_Epitope_Rep5 1087.6066170851898 1087.6055299358602 55.18 2 0.08817461972953339 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 9656 16218 AYGNVFSAF True NCI_RA007_Epitope_Rep3 974.4497820906199 974.44868993586 71.484 2 0.08817206228130481 0.0032900148050666227 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 4127 14114 AHTPVIISV True PC9_epitope_Rep2 935.54401682863 935.54290993586 59.562 2 0.0881673864090291 0.0032900148050666227 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 26271 18526 FIDDANYSV True PC9_epitope_Rep1 1042.4607406971402 1042.4596499358602 76.049 2 0.08815679207040653 0.0032900148050666227 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 105460 7557 SVASISLTK True NCI_RA007_Epitope_Rep2 904.52294703088 904.52184993586 34.02 2 0.0881564009993759 0.0032900148050666227 0.9438714419765777 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 105779 21574 SVIEQIVYV True PC9_epitope_Rep3 1048.580461907 1048.57936993586 88.279 2 0.08815016205259225 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 27814 19128 FQGVEFHYV True PC9_epitope_Rep3 1124.5290950404801 1124.5279899358602 78.797 2 0.08814900370041563 0.0032900148050666227 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 8230 18725 ATIGELAQV True PC9_epitope_Rep5 900.4916469025999 900.49054993586 77.042 2 0.08814547665613041 0.0032900148050666227 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 48822 5615 KEQVPPPAV True H1975_Epitope_Rep3 963.5389314481897 963.53782993586 26.635 2 0.0881446396383287 0.0032900148050666227 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 17227 13328 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 62.923 2 0.088143228113913 0.0032900148050666227 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 88401 16802 QYPVYWDHLEF True NCI_RA007_Epitope_Rep5 1495.67721582615 1495.67610993586 71.38 2 0.08813556067557667 0.0032900148050666227 0.9438714419765777 ['ENSG00000090487|ENST00000204566|SPG21'] 16315 6992 EEITGTQPP True H1975_Epitope_Rep2 970.46074069714 970.4596499358599 31.818 2 0.08813168064985737 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 34661 23368 GQLDFSEFL True PC9_epitope_Rep1 1054.49712620586 1054.49657496793 94.664 1 0.08813014808368948 0.0032900148050666227 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 71877 9395 MPNGDHIVSA True PC9_epitope_Rep3 1039.47567956863 1039.4745899358602 41.075 2 0.08812872653841643 0.0032900148050666227 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 127593 13116 VQYNEPLKV True PC9_epitope_Rep3 1088.5866099165999 1088.58550993586 55.472 2 0.08812541306238264 0.0032900148050666227 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 47338 20473 IYGYVAEQF True PC9_epitope_Rep5 1088.5178616504397 1088.51727496793 83.787 1 0.08812070064682631 0.0032900148050666227 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 86240 15947 QPYMPTVSA True PC9_epitope_Rep5 992.4637179025999 992.46262993586 66.329 2 0.08811979862179979 0.0032900148050666227 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 73997 7310 NHQGTYVL True PC9_epitope_Rep4 930.4559301002199 930.45482993586 35.447 2 0.08810604790757028 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 40618 5406 HTEVPARNLY True H1975_Epitope_Rep2 1198.6094706195 1198.60783490379 25.827 3 0.08809872870727517 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 27845 17015 FQLESVNKL True PC9_epitope_Rep5 1076.5866099166 1076.58550993586 70.467 2 0.08809798769214576 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000135052|Q8NBJ4-2|GOLM1', 'ENSG00000135052|ENST00000388712|GOLM1'] 103155 19731 SQNDGFFAV True PC9_epitope_Rep4 983.4348603024699 983.43376993586 84.018 2 0.08809210344064076 0.0032900148050666227 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 12608 6308 DLEAHIDSANK True PC9_epitope_Rep2 1211.57823006087 1211.57659490379 29.663 3 0.08808711531528685 0.0032900148050666227 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 72887 19865 NAVAALSEI True PC9_epitope_Rep5 886.47599683846 886.47544496793 81.461 1 0.08808695190291299 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 13179 11610 DLTDYLM[Oxidation]K True H1975_Epitope_Rep1 1013.47394861357 1013.47337496793 49.647 1 0.08808690145307844 0.0032900148050666227 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 69059 8352 LVIITAGAR True H1975_Epitope_Rep3 912.5756513100799 912.57454993586 37.11 2 0.0880858424909938 0.0032900148050666227 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 44868 20531 IQALISGIEA True PC9_epitope_Rep1 1013.57571087973 1013.57517496793 83.784 1 0.08808384756748976 0.0032900148050666227 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 86329 8581 QQIKELEKL True PC9_epitope_Rep4 1127.65502382959 1127.6533649037901 40.487 3 0.08808287295723485 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000095787|Q9BTA9-5|WAC', 'nc|ENSG00000095787|Q9BTA9-2|WAC', 'ENSG00000095787|ENST00000354911|WAC', 'ENST00000345541.6_1_10:28905090-28908532:+|nuORF'] 72662 18631 MWSPTHPALF True PC9_epitope_Rep6 1185.5641006502099 1185.56300993586 84.306 2 0.08807677933357655 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 75032 12272 NM[Oxidation]DNMFESY True H1975_Epitope_Rep2 1165.40561135357 1165.40507496793 52.289 1 0.08807487312901828 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 11775 14092 DHIHIIAL True PC9_epitope_Rep6 930.52870111766 930.52760993586 66.077 2 0.08807377316943187 0.0032900148050666227 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 47640 18993 IYPPINVLPSL True NCI_RA007_Epitope_Rep4 1224.71181042972 1224.7107099358602 82.151 2 0.08807319776705624 0.0032900148050666227 0.9438714419765777 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 117001 10940 TYQDIQNTI True NCI_RA007_Epitope_Rep2 1094.52440358286 1094.52387496793 47.162 1 0.08807117323303393 0.0032900148050666227 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 90953 7533 RLFVGSIPK True NCI_RA007_Epitope_Rep5 1015.6178504752298 1015.61674993586 35.662 2 0.08806377053614403 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 89206 9312 REIIINAV True NCI_RA007_Epitope_Rep4 926.5549158654999 926.55380993586 42.675 2 0.08806187315767938 0.0032900148050666227 0.9438714419765777 ['ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 116449 23332 TWYPVSIPAF True PC9_epitope_Rep1 1179.5964463243097 1179.5953499358602 94.537 2 0.0880505755731008 0.0032900148050666227 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1'] 108576 5909 TEHSPPLPP True H1975_Epitope_Rep3 973.4868958753299 973.48578993586 27.739 2 0.08805026851414709 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 5361 10085 ALTGHLEEV True PC9_epitope_Rep4 967.49746055903 967.49636993586 46.464 2 0.08804663607821495 0.0032900148050666227 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 44695 18036 IPNPAQTSVVV True PC9_epitope_Rep3 1123.62372370131 1123.62262993586 74.577 2 0.08804460915767168 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 42788 22011 IFIDPGYQTF True PC9_epitope_Rep1 1199.58627556343 1199.5857749679299 89.489 1 0.08802150156731475 0.0032900148050666227 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 9748 13759 AYLEAHETF True PC9_epitope_Rep5 1079.4923751785898 1079.4912699358601 57.946 2 0.08801100935977901 0.0032900148050666227 0.9438714419765777 ['MDM2-NUP107|1|fusion', 'nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 2241 12025 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 51.335 2 0.08800915649774838 0.0032900148050666227 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 42904 7859 IFVGGIKEN True NCI_RA007_Epitope_Rep4 975.5389314481899 975.53782993586 36.938 2 0.08800720170517365 0.0032900148050666227 0.9438714419765777 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 54475 7472 LAAARLAAA True PC9_epitope_Rep2 826.5024863698198 826.50138993586 34.113 2 0.08800698993008835 0.0032900148050666227 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 86533 9175 QRAPGVADL True PC9_epitope_Rep2 925.4981292653699 925.49702993586 40.629 2 0.08799864006446338 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5', 'ENST00000400933.2_1_1:247348476-247348617:-|nuORF', 'ENST00000545220.1_1_12:7343495-7354840:+|nuORF'] 2383 5398 AEQIKHILA True H1975_Epitope_Rep2 1021.5920296502098 1021.59092993586 25.796 2 0.08799072484363493 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000458298.1_1_6:86137181-86137394:-|nuORF', 'ENST00000490277.1_1_13:45913571-45913754:-|nuORF'] 75677 16687 NQTPVTLQV True PC9_epitope_Rep3 998.5396597241801 998.53911496793 69.322 1 0.0879881901042375 0.0032900148050666227 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 113570 16166 TQYTVFHSL True PC9_epitope_Rep2 1094.53965972418 1094.53856993586 67.436 2 0.08798063311321365 0.003317067821700751 0.9438714419765777 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant', 'ENST00000504435.1_1_4:882633-887812:-|nuORF'] 113700 11535 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 49.248 2 0.0879793255143436 0.003317067821700751 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 75014 23122 NMAELFAVV True PC9_epitope_Rep5 992.5001034113199 992.49900993586 93.926 2 0.08797246887892819 0.003317067821700751 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000530983.5_1_8:145651064-145651211:-|nuORF', 'ENST00000526977.5_1_8:145650235-145651211:-|nuORF', 'ENST00000528142.5_1_8:145649272-145651551:-|nuORF'] 138419 11772 YRDPYTGQSV True PC9_epitope_Rep3 1184.5462016566 1184.5451099358602 50.3 2 0.08796961542103961 0.003317067821700751 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 68976 14938 LVGIDIFTGK True NCI_RA007_Epitope_Rep1 1061.61209638845 1061.61098993586 62.167 2 0.08795396029265651 0.0033423741815292733 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 88443 9522 QYTQALEKF True NCI_RA007_Epitope_Rep5 1126.5658744720197 1126.56476993586 43.262 2 0.08794981165392625 0.0033423741815292733 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 120595 11875 VGAGAPVYL True H1975_Epitope_Rep3 845.46470387877 845.46360993586 50.827 2 0.08794136944199717 0.0033423741815292733 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 91797 8443 RPLLKAITA True PC9_epitope_Rep4 981.63350053937 981.63240993586 39.941 2 0.08793233241673137 0.0033423741815292733 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 6476 7157 APTGDLPRA True PC9_epitope_Rep1 896.4715801643599 896.47048993586 32.34 2 0.08791932022880164 0.0033423741815292733 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 25522 7712 FEQEMATAA True NCI_RA007_Epitope_Rep5 996.4222470134398 996.42114993586 36.365 2 0.08790821999637273 0.0033423741815292733 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 27086 22865 FLPSYIIDV True PC9_epitope_Rep1 1065.57464825057 1065.57354993586 92.743 2 0.08790125367393162 0.0033423741815292733 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1', 'ENST00000532560.5_1_8:145625727-145626379:-|nuORF'] 31531 13068 GEFGGFGSV True NCI_RA007_Epitope_Rep3 855.3762827971899 855.37573496793 58.683 1 0.08789730705751134 0.0033423741815292733 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 74036 11906 NHSDYNMVL True PC9_epitope_Rep6 1091.47059418819 1091.46948993586 57.031 2 0.08789619665082013 0.0033423741815292733 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 11676 17616 DHDLQAIL True PC9_epitope_Rep2 923.47124581119 923.47014993586 73.039 2 0.08787440265011177 0.0033423741815292733 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000477802.1_1_1:182828020-182829385:+|nuORF'] 113430 18679 TQNDIISTL True PC9_epitope_Rep4 1003.51858992643 1003.51748993586 79.929 2 0.08786934219019384 0.0033423741815292733 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 40022 4329 HQVEQTEL True NCI_RA007_Epitope_Rep3 982.4719740871799 982.47086993586 23.776 2 0.08786538801636443 0.0033423741815292733 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 32091 8626 GEYGDSPVP True H1975_Epitope_Rep2 919.3923267841499 919.39177496793 38.136 1 0.0878604879067984 0.0033423741815292733 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 65152 14629 LSDSFSDLY True H1975_Epitope_Rep3 1045.46040634397 1045.4598749679299 61.639 1 0.08785868003985328 0.0033423741815292733 0.9438714419765777 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 132791 17332 VYSQIPAAVKL True PC9_epitope_Rep2 1187.6914093383098 1187.6903099358601 71.922 2 0.08785513929197131 0.0033423741815292733 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 133219 7195 WEDEGVRAC True H1975_Epitope_Rep3 1063.4392940599098 1063.43818993586 32.651 2 0.08784751180610818 0.0033423741815292733 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 2201 14559 AENPDIFAV True H1975_Epitope_Rep2 974.4709114580199 974.4703649679301 61.158 1 0.0878394492458514 0.0033423741815292733 0.9438714419765777 ['ENSG00000139514|ENST00000380752|SLC7A1'] 7675 4958 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep5 990.4618036426001 990.46125496793 24.106 1 0.08783871898457088 0.0033423741815292733 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 96715 8075 SEQEPVQGVEP True H1975_Epitope_Rep2 1197.5513466066898 1197.5502499358602 36.008 2 0.08783382137797165 0.0033423741815292733 0.9438714419765777 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B'] 6094 12889 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 54.875 2 0.08783370806365613 0.0033423741815292733 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 38488 6005 HHDDPEVL True PC9_epitope_Rep1 960.4301092752 960.42900993586 27.912 2 0.08782883804900095 0.0033423741815292733 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 1426 7689 AEEGPPLGA True H1975_Epitope_Rep3 839.4024975450299 839.40194496793 34.559 1 0.08782812709488985 0.0033423741815292733 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 132417 5962 VYNNNSSRF True PC9_epitope_Rep3 1099.50467119779 1099.50356993586 27.99 2 0.08782618952048328 0.0033423741815292733 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant'] 30919 17890 GASENIVIQV True PC9_epitope_Rep4 1028.5502244078798 1028.54912993586 76.852 2 0.08781613554653489 0.0033686498234175495 0.9438714419765777 ['ENSG00000106804|ENST00000223642|C5'] 77520 5308 NYQKRFQNL True NCI_RA007_Epitope_Rep3 1209.6254550368096 1209.6243499358602 27.888 2 0.08780249404783527 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 1267 8003 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 35.754 2 0.08780243141970955 0.0033686498234175495 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 4316 23275 AILPTSIFL True PC9_epitope_Rep2 973.58481901145 973.58427496793 95.011 1 0.08779935254572804 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5'] 97920 17606 SHNPLANIL True PC9_epitope_Rep4 977.52942939365 977.52832993586 75.737 2 0.08779871495063624 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 158 13155 AADPVSPLL True NCI_RA007_Epitope_Rep3 881.4858332461699 881.48472993586 59.019 2 0.08778483380006841 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 102770 3968 SQEGRPVQV True PC9_epitope_Rep6 998.5145076054997 998.51340993586 22.016 2 0.08777597766523532 0.0033686498234175495 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 67516 15349 LTELPPLDDY True H1975_Epitope_Rep1 1174.57577044938 1174.57517496793 64.308 1 0.0877752536551477 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'ENST00000587353.5_1_18:45394679-45413284:-|nuORF'] 91646 10487 RPFQGTMGV True PC9_epitope_Rep4 991.4909357099498 991.48982993586 48.054 2 0.08774022285328523 0.0033686498234175495 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 1235 12520 AEDINYVVP True H1975_Epitope_Rep2 1018.49712620586 1018.49602993586 53.252 2 0.08773276587996798 0.0033686498234175495 0.9438714419765777 ['ENSG00000170871|ENST00000307659|KIAA0232'] 70737 17091 MEALPLLAA True H1975_Epitope_Rep1 927.5099398190299 927.50939496793 71.166 1 0.08772776053809994 0.0033686498234175495 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 54474 7379 LAAARLAAA True PC9_epitope_Rep2 826.5024863698198 826.50138993586 33.764 2 0.08772717032089344 0.0033686498234175495 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 87043 7109 QSDPTQSGMY True H1975_Epitope_Rep2 1112.44443901 1112.44387496793 32.276 1 0.08772477973811318 0.0033686498234175495 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1', 'nc|ENSG00000105856|O60381-2|HBP1'] 90202 15168 RHIEIFTDL True PC9_epitope_Rep6 1142.6084079903399 1142.60730993586 70.419 2 0.08772418852617064 0.0033686498234175495 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 1580 6246 AEFGQAESA True H1975_Epitope_Rep2 908.3875757568799 908.3870249679301 28.981 1 0.08772119166790433 0.0033686498234175495 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 113892 15599 TRHPFLTAL True PC9_epitope_Rep5 1054.59236400338 1054.59126993586 65.012 2 0.08771562589583488 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 11565 13842 DGQFSVLFTK True NCI_RA007_Epitope_Rep2 1140.5815245361598 1140.5804299358601 58.493 2 0.08770653454512711 0.0033686498234175495 0.9438714419765777 ['CON__P12763'] 102313 6659 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48104993586 30.418 2 0.08769640573261381 0.0033686498234175495 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 14940 12690 DYMKTTSNF True PC9_epitope_Rep5 1105.47501086229 1105.47390993586 53.817 2 0.08769483856408813 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 44823 19716 IPVSGITVV True PC9_epitope_Rep2 883.53786881903 883.53676993586 81.226 2 0.08769415631290377 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 119831 6170 VEVPETPKA True H1975_Epitope_Rep1 968.5178616504398 968.51676993586 28.802 2 0.08768950066583231 0.0033686498234175495 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 67320 13699 LTDQAIFY True H1975_Epitope_Rep3 969.4807478657299 969.4801949679301 57.987 1 0.08768407842819687 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 118043 11966 VATGVISTL True H1975_Epitope_Rep3 859.50148331031 859.5009349679301 51.185 1 0.0876812766566297 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL', 'ENST00000464970.1_1_7:65554274-65556745:+|nuORF'] 97584 20566 SGYPGLLNGV True PC9_epitope_Rep5 975.5025459394699 975.50199496793 84.152 1 0.08768072248612128 0.0033686498234175495 0.9438714419765777 ['ENSG00000140006|ENST00000620954|WDR89'] 38019 9269 HEIEVETIP True NCI_RA007_Epitope_Rep5 1065.53423999057 1065.5331499358601 42.3 2 0.08767993682481134 0.0033686498234175495 0.9438714419765777 ['ENSG00000100811|ENST00000262238|YY1'] 24552 10842 FALNHPEL True NCI_RA007_Epitope_Rep4 939.48141657207 939.48030993586 48.554 2 0.08767573106303825 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'NDRG3|p.G292Dfs*5|1|0.18|ENSG00000101079|chr20:36656516-36656516|C/-|frameshift_variant', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 5666 22230 APALLLIPA True PC9_epitope_Rep1 877.56368964405 877.56258993586 90.33 2 0.08767144619822684 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 2680 11391 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.47964993586 48.865 2 0.08766312753719147 0.0033686498234175495 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 86373 8450 QQLGKVVQV True PC9_epitope_Rep6 997.5920296502098 997.59092993586 42.202 2 0.0876619078406725 0.0033686498234175495 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 61353 4012 LLEGEESR True PC9_epitope_Rep4 931.4610750503099 931.45996993586 21.676 2 0.08765967056371356 0.0033686498234175495 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 78164 6436 PAPPPPPPP True H1975_Epitope_Rep2 865.46978925921 865.46868993586 29.676 2 0.08765564196896122 0.0033686498234175495 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 73605 21897 NGFPVFATV True PC9_epitope_Rep1 950.48616759934 950.48561496793 89.04 1 0.08762611647337437 0.0033686498234175495 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 17292 14944 EHDGSLFQAV True PC9_epitope_Rep4 1101.50908787189 1101.50798993586 65.422 2 0.08762554981511046 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 139645 15087 YTSDYFISY True H1975_Epitope_Rep3 1157.49170647225 1157.4906099358602 63.428 2 0.08761288331846617 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 52191 16577 KMIEDLQNEL True PC9_epitope_Rep4 1231.61183868827 1231.6107499358602 71.739 2 0.08756466863415663 0.0033686498234175495 0.9438714419765777 ['ENSG00000198887|ENST00000361138|SMC5'] 84618 6020 QHDPSAVAV True PC9_epitope_Rep5 922.4508447197799 922.44974993586 28.149 2 0.08755457085794692 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 1555 6043 AEEYGARVV True H1975_Epitope_Rep3 992.4927095317598 992.49160993586 28.258 2 0.08755295694509413 0.0033686498234175495 0.9438714419765777 ['ENSG00000132740|ENST00000255078|IGHMBP2', 'IGHMBP2|p.R425L|1|0.5|ENSG00000132740|chr11:68933337-68933337|G/T|missense_variant'] 86582 10471 QRDEKVLEL True PC9_epitope_Rep5 1128.6138872935999 1128.61278993586 45.262 2 0.08755240573142153 0.0033686498234175495 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 110730 10857 TKEVNSGFFY True H1975_Epitope_Rep2 1190.5607890915799 1190.56027496793 46.79 1 0.0875506470645466 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000132141|Q92526-3|CCT6B'] 39068 5088 HKVPGDVSL True NCI_RA007_Epitope_Rep3 950.5185303567799 950.51742993586 27.005 2 0.08754747927022336 0.0033686498234175495 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 76253 17180 NSDLNNLLF True H1975_Epitope_Rep2 1048.5189242796 1048.51837496793 71.37 1 0.08754649129304681 0.0033686498234175495 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 25495 2781 FEQAGEPRQP True H1975_Epitope_Rep2 1157.5465360097699 1157.54542993586 14.726 2 0.08754444104798134 0.0033686498234175495 0.9438714419765777 ['ENST00000549114.5_1_16:779204-779453:+|nuORF', 'ENSG00000103253|ENST00000389703|HAGHL'] 110270 23841 TIFSEFITI True PC9_epitope_Rep1 1069.5695628701299 1069.56846993586 96.503 2 0.08754245045507393 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000188343|A1XBS5-3|CIBAR1', 'ENSG00000188343|ENST00000518322|CIBAR1', 'ENST00000528023.3_1_15:41455975-41456569:+|nuORF', 'nc|ENSG00000188343|A1XBS5-4|CIBAR1'] 96103 11844 SEDPTVPLP True H1975_Epitope_Rep1 953.4705771048499 953.47002496793 50.555 1 0.08752998025835275 0.0033686498234175495 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 89601 5671 RESPFSTSA True NCI_RA007_Epitope_Rep4 980.45632402304 980.45522993586 28.42 2 0.08752834285454401 0.0033686498234175495 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 94854 10357 RYMPQNPHII True PC9_epitope_Rep4 1267.6495616096697 1267.64846993586 47.536 2 0.08752736941056971 0.0033686498234175495 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 106671 18576 SYAELGTTI True PC9_epitope_Rep5 953.47057710485 953.46948993586 76.477 2 0.08752728133572876 0.0033686498234175495 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 6247 7060 APRLQSEVA True PC9_epitope_Rep1 969.5243440132099 969.52324993586 31.963 2 0.08751370825392896 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 74200 19733 NIANHFFTV True PC9_epitope_Rep3 1061.52942939365 1061.52832993586 81.131 2 0.0875102887184776 0.0033686498234175495 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 96304 7819 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43308993586 35.054 2 0.08751015644865283 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 139855 15623 YVDPQFLTY True H1975_Epitope_Rep2 1144.54407639828 1144.5429699358601 65.249 2 0.08750830517332195 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2', 'nc|ENSG00000181191|Q8NG27-2|PJA1', 'ENSG00000181191|ENST00000374571|PJA1', 'nc|ENSG00000181191|Q8NG27|PJA1'] 70791 9417 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42717496793 41.189 1 0.08750260821394945 0.0033686498234175495 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 38104 7425 HENVSVIP True H1975_Epitope_Rep3 893.4606811274899 893.45958993586 33.538 2 0.08750081176851411 0.0033686498234175495 0.9438714419765777 ['ENST00000551440.1_1_12:100594629-100598862:+|nuORF', 'ENST00000550813.5_1_12:100594629-100599999:+|nuORF', 'nc|ENSG00000075089|Q9GZN1-2|ACTR6', 'ENSG00000075089|ENST00000188312|ACTR6'] 138325 16013 YRAPEVLL True PC9_epitope_Rep2 959.5440168286299 959.54290993586 66.848 2 0.08749927222873036 0.0033686498234175495 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 9927 21416 AYPPAPFMHIL True PC9_epitope_Rep1 1255.64235097091 1255.64124993586 87.212 2 0.08749840758069072 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 114980 6962 TTISKVSQV True PC9_epitope_Rep5 961.5444107514498 961.54330993586 31.747 2 0.08748625613490885 0.0033686498234175495 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 72619 8509 M[Oxidation]VVQDGIVKA True PC9_epitope_Rep2 1074.57433136118 1074.5732299358601 38.093 2 0.0874847561888022 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 46872 13897 IVGPVVGL True H1975_Epitope_Rep2 752.4796256669199 752.47907496793 58.599 1 0.08748085107966723 0.0033686498234175495 0.9438714419765777 ['ENSG00000152348|ENST00000282185|ATG10'] 85483 19377 QLIDIIHTA True PC9_epitope_Rep1 1022.5760452329 1022.57494993586 79.343 2 0.08747125225529638 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 136472 14129 YHHGYSYIL True PC9_epitope_Rep1 1151.53999407735 1151.5383449037902 59.172 3 0.08746625763939997 0.0033686498234175495 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 83008 17976 PYISNIYLI True NCI_RA007_Epitope_Rep4 1094.60119735158 1094.60010993586 77.78 2 0.08743564972950685 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 75842 11696 NRDLATPVM True PC9_epitope_Rep1 1015.51206507735 1015.51096993586 49.864 2 0.08743471519388277 0.0033686498234175495 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 106017 19223 SVLNELPSA True PC9_epitope_Rep5 928.48656152216 928.48601496793 78.981 1 0.08743096837701586 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000167608|Q7Z404|TMC4', 'TMC4|p.V56Cfs*94|1|0.22|ENSG00000167608|chr19:54172015-54172015|C/-|frameshift_variant', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 27273 22118 FLYPFPLAL True H1975_Epitope_Rep1 1079.60555445603 1079.6044499358602 92.032 2 0.08742818446170338 0.0033686498234175495 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 46270 5769 ITDVKPGNY True H1975_Epitope_Rep3 1005.51311062317 1005.51200993586 27.217 2 0.08741688493100783 0.0033686498234175495 0.9438714419765777 ['ENSG00000113083|ENST00000231004|LOX', 'ENST00000513319.5_1_5:121402440-121412860:-|nuORF', 'nc|ENSG00000115318|P58215-2|LOXL3', 'nc|ENSG00000115318|P58215-3|LOXL3', 'ENSG00000115318|ENST00000264094|LOXL3'] 9795 12955 AYLHTTTTF True PC9_epitope_Rep1 1053.51311062317 1053.51200993586 54.704 2 0.08741483009512081 0.0033686498234175495 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 69510 20178 LVSPASFENV True PC9_epitope_Rep1 1061.5393253710101 1061.53822993586 82.443 2 0.08740552476002082 0.0033686498234175495 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 38212 6750 HETSIDISA True NCI_RA007_Epitope_Rep4 971.45598966987 971.45488993586 32.583 2 0.08740107436047259 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 115059 18285 TTSDIDYAL True PC9_epitope_Rep1 997.46040634397 997.45985496793 75.123 1 0.08739812896951973 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 52287 9990 KPADLQNLA True PC9_epitope_Rep5 968.5290950404799 968.52798993586 43.402 2 0.08738724005250258 0.0033686498234175495 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4', 'ENSG00000159212|ENST00000349499|CLIC6', 'nc|ENSG00000159212|Q96NY7|CLIC6'] 29114 14385 FTSATITYL True H1975_Epitope_Rep2 1015.52261267771 1015.52207496793 60.482 1 0.0873827607998868 0.0033686498234175495 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF'] 131774 17768 VYAFNLDTF True NCI_RA007_Epitope_Rep4 1088.5178616504397 1088.51676993586 76.918 2 0.08738062550096322 0.0033686498234175495 0.9438714419765777 ['ENST00000562913.5_1_16:87744798-87760508:-|nuORF', 'ENST00000566349.5_1_16:87741959-87776602:-|nuORF', 'nc|ENSG00000104731|Q8TBB5-2|KLHDC4', 'nc|ENSG00000104731|Q8TBB5-3|KLHDC4', 'ENSG00000104731|ENST00000270583|KLHDC4'] 48472 5369 KEERPPELP True H1975_Epitope_Rep2 1093.5767735088898 1093.57566993586 25.692 2 0.08737160736028286 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 48517 11104 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 50.78 2 0.08737004073645717 0.0033686498234175495 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 39178 6998 HLGALLAR True NCI_RA007_Epitope_Rep2 849.51847078713 849.51736993586 31.842 2 0.08736527953248345 0.0033686498234175495 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 135772 6536 YENEVALR True PC9_epitope_Rep6 992.4927095317598 992.49160993586 33.814 2 0.08736479160301315 0.0033686498234175495 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 47440 13786 IYIKQIKTF True PC9_epitope_Rep5 1152.6906810623198 1152.68958993586 58.047 2 0.08736114754027083 0.0033686498234175495 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 102351 6824 SPVFTSRSAA True PC9_epitope_Rep3 1021.51925863277 1021.51816993586 31.265 2 0.087357950204949 0.0033686498234175495 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 103849 7350 SRISSSSF True PC9_epitope_Rep5 869.4242956187701 869.42318993586 33.231 2 0.08735127460470647 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 35025 14305 GRAPQVLVL True PC9_epitope_Rep4 951.5865503469499 951.5860049679301 62.924 1 0.08735122739631995 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 128902 10286 VSTEVDARL True PC9_epitope_Rep5 988.5189242795998 988.51782993586 44.552 2 0.08734908987675537 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 113583 8410 TRADTTTIL True PC9_epitope_Rep4 990.53457434374 990.53346993586 39.813 2 0.08733892317748775 0.0033686498234175495 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 138313 17275 YRAPELML True PC9_epitope_Rep2 991.5160878286299 991.51498993586 71.706 2 0.08733791422189974 0.0033686498234175495 0.9438714419765777 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 1772 5355 AEHLGEAEVA True H1975_Epitope_Rep2 1024.48253877088 1024.4814499358602 25.643 2 0.08733481685021958 0.0033686498234175495 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 6662 17992 AQAGALLQV True PC9_epitope_Rep5 869.49706663621 869.49651496793 74.223 1 0.08732917772515986 0.0033686498234175495 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 104083 11917 SRVDGVVL True PC9_epitope_Rep1 843.48141657207 843.48030993586 50.705 2 0.08732180483868077 0.0033686498234175495 0.9438714419765777 ['ENST00000496699.1_1_1:117509714-117517097:+|nuORF', 'ENSG00000134247|ENST00000393203|PTGFRN'] 39134 4705 HLDQSQKSLY True H1975_Epitope_Rep2 1217.60405088589 1217.6029499358601 23.19 2 0.08730092229183954 0.0033686498234175495 0.9438714419765777 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 8036 10331 ATDVNDALGY True H1975_Epitope_Rep1 1037.4665543535698 1037.46544993586 44.686 2 0.08729365511998263 0.0033686498234175495 0.9438714419765777 ['ENST00000486023.1_1_21:47422428-47423924:+|nuORF', 'ENST00000498614.5_1_21:47421141-47423924:+|nuORF', 'ENSG00000142156|ENST00000361866|COL6A1'] 1520 9892 AEEPWGEEA True H1975_Epitope_Rep3 1016.4087051242799 1016.4081749679301 43.08 1 0.08729333347491397 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 97842 11682 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 56.066 2 0.08728909250809229 0.0033686498234175495 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 96972 7605 SEVGDTQVV True H1975_Epitope_Rep3 932.4450906330001 932.44398993586 34.234 2 0.08728846082838489 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000475205.1_1_21:30434643-30435788:-|nuORF'] 8664 20978 AVATDFFTV True PC9_epitope_Rep4 969.48074786573 969.4801949679301 88.853 1 0.08728653593538137 0.0033686498234175495 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 34520 5614 GQEDHYNNL True PC9_epitope_Rep2 1088.45230127176 1088.45120993586 26.981 2 0.08728415173646444 0.0033686498234175495 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 65162 12685 LSDTEVLEY True H1975_Epitope_Rep2 1067.50227115595 1067.5011699358602 53.894 2 0.08728336509027017 0.0033686498234175495 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 75118 10669 NMVAKVDEV True PC9_epitope_Rep5 1003.5008316873099 1003.49972993586 46.027 2 0.0872615729705114 0.0033686498234175495 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 132622 11764 VYPSSLSKI True PC9_epitope_Rep4 992.5542471591599 992.55314993586 53.016 2 0.08726146909344275 0.0033686498234175495 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 64332 21528 LQNPIIVQL True PC9_epitope_Rep5 1036.62808080576 1036.6269899358601 87.844 2 0.0872536803856373 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1', 'SMCHD1|p.R1275I|1|0.2|ENSG00000101596|chr18:2747544-2747544|G/T|missense_variant'] 44969 7074 IQHPSNVL True PC9_epitope_Rep4 906.49231560894 906.49120993586 34.477 2 0.08725345399029939 0.0033686498234175495 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 31663 6905 GEIASFDKA True H1975_Epitope_Rep3 936.4552613938799 936.45416993586 31.521 2 0.08724592151118343 0.0033686498234175495 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 49520 8320 KKFENEIIL True NCI_RA007_Epitope_Rep3 1132.6492101731599 1132.64810993586 39.844 2 0.08721943610232703 0.0033686498234175495 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.D1124Y|1|0.33|ENSG00000134516|chr5:170019097-170019097|G/T|missense_variant'] 1167 6527 AEAVAHFEA True H1975_Epitope_Rep2 943.43994568291 943.43884993586 30.021 2 0.08721804535646528 0.0033686498234175495 0.9438714419765777 ['ENSG00000177051|ENST00000317683|FBXO46'] 131946 17858 VYFPDQHINF True PC9_epitope_Rep6 1278.6033226099 1278.6022299358601 81.317 2 0.0872031895320892 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 88253 18884 QYESKVFYL True PC9_epitope_Rep1 1175.5862755634298 1175.5851699358602 77.422 2 0.0872016010383215 0.0033686498234175495 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 119942 9734 VEYEVPEAA True H1975_Epitope_Rep1 1005.4654917244097 1005.46438993586 42.37 2 0.08719860201927597 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 83683 10570 QEALSALTA True H1975_Epitope_Rep1 902.4709114580199 902.4703649679301 45.611 1 0.08719558875397991 0.0033686498234175495 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 139947 19256 YVIEDDVNM True PC9_epitope_Rep1 1096.47467650912 1096.47417496793 78.868 1 0.08718856102364395 0.0033686498234175495 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 130885 14210 VVHDGFEGL True PC9_epitope_Rep1 971.47124581119 971.47014993586 59.481 2 0.08718706376480838 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 2624 7427 AESPGVPVA True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 33.513 1 0.08718147597216555 0.0033686498234175495 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 118887 5682 VEEPENPAA True H1975_Epitope_Rep3 954.4294405688598 954.42834993586 26.884 2 0.08716827741245174 0.0033686498234175495 0.9438714419765777 ['ENSG00000171316|ENST00000423902|CHD7'] 648 10282 AATKILTEL True H1975_Epitope_Rep3 958.5698972233 958.56880993586 44.601 2 0.08716518972747908 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'ENSG00000129680|ENST00000316077|MAP7D3'] 86019 13908 QPITPGPSI True PC9_epitope_Rep4 908.4967322830399 908.49618496793 61.401 1 0.08716131855336005 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 33293 14132 GLATDVQTV True PC9_epitope_Rep5 902.47091145802 902.46980993586 59.37 2 0.08715282425494925 0.0033686498234175495 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 87921 17160 QVPDDLPNV True PC9_epitope_Rep4 995.4923751785899 995.49126993586 74.011 2 0.08714378316595758 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 17291 14846 EHDGSLFQAV True PC9_epitope_Rep4 1101.50908787189 1101.50798993586 65.045 2 0.08714291841101732 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 103588 9190 SRDGM[Oxidation]NIVL True PC9_epitope_Rep4 1019.5069800773499 1019.50588993586 42.944 2 0.08713837624394731 0.0033686498234175495 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 47432 14101 IYIKQIKTF True PC9_epitope_Rep3 1152.6906810623198 1152.6890249037901 59.325 3 0.08713813228654138 0.0033686498234175495 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 96596 7589 SELVSNGV True H1975_Epitope_Rep2 803.40249754503 803.40194496793 34.143 1 0.08713685163522278 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF', 'ENST00000517342.1_1_8:57389817-57390279:-|nuORF', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 40211 4171 HRGTGIAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 22.986 2 0.08713136780116681 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 83321 14060 QALLDLHAL True NCI_RA007_Epitope_Rep4 992.5654805492001 992.5649349679301 61.364 1 0.08712489863213525 0.0033686498234175495 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 123535 15358 VIIEKTYSL True PC9_epitope_Rep1 1064.61176203528 1064.6106699358602 63.892 2 0.08711387296589068 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 7510 8908 ASELKALGY True H1975_Epitope_Rep2 950.5072969667399 950.50618993586 39.231 2 0.08711293563117198 0.0033686498234175495 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 34639 18885 GQISEVVVV True PC9_epitope_Rep1 928.5229470308799 928.52184993586 77.426 2 0.08710394639545997 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 88862 4735 REAEFTKSIA True NCI_RA007_Epitope_Rep3 1150.59823722946 1150.5971499358602 25.576 2 0.08710052709680954 0.0033686498234175495 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 6590 18517 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 76.015 2 0.08709858939610055 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 72051 13741 MRAFADAL True PC9_epitope_Rep4 893.4429228883698 893.44182993586 60.753 2 0.08708501397614749 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 32996 17135 GIVGGLSTV True PC9_epitope_Rep4 801.4596184983301 801.4590749679301 73.915 1 0.08708461374574042 0.0033686498234175495 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 118625 3898 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 20.038 2 0.08708192321634414 0.0033686498234175495 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 125053 15185 VLPGHFNTF True PC9_epitope_Rep4 1030.5236157372199 1030.5225099358602 66.333 2 0.08708024787492456 0.0033686498234175495 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 131513 18383 VVVEIIKAV True PC9_epitope_Rep5 968.6270181765998 968.62592993586 75.728 2 0.08707889844540893 0.0033686498234175495 0.9438714419765777 ['ENSG00000066654|ENST00000396083|THUMPD1'] 6273 9507 APRPTIINA True PC9_epitope_Rep3 951.5501648382299 951.54906993586 41.516 2 0.08707882058431542 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 4594 21964 ALADDDFLTV True PC9_epitope_Rep1 1078.5182555732601 1078.51767496793 89.303 1 0.08707733283096133 0.0033686498234175495 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 117029 14079 TYQDIQNTI True PC9_epitope_Rep6 1094.52440358286 1094.52387496793 66.026 1 0.08707143345879657 0.0033686498234175495 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 94907 15858 RYPDRITLI True PC9_epitope_Rep1 1145.65569253593 1145.65458993586 65.809 2 0.08705772643624883 0.0033686498234175495 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 113642 15189 TRDDSPLYI True PC9_epitope_Rep5 1078.5294889632999 1078.52838993586 63.431 2 0.08705207514957762 0.0033686498234175495 0.9438714419765777 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 115130 20748 TTYPNTYIF True PC9_epitope_Rep2 1118.5284263341398 1118.52732993586 85.247 2 0.08705042454176294 0.0033686498234175495 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 96758 10154 SEQPPNSVLP True H1975_Epitope_Rep2 1066.5294889633 1066.52838993586 44.056 2 0.08704591709533897 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000241839|Q8TD55-2|PLEKHO2', 'ENSG00000241839|ENST00000323544|PLEKHO2'] 125046 16641 VLPGHFNTF True PC9_epitope_Rep1 1030.5236157372199 1030.5225099358602 68.838 2 0.08704569839830487 0.0033686498234175495 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 28272 13831 FRVKYETEL True PC9_epitope_Rep5 1183.62372370131 1183.62208490379 58.221 3 0.08704493321856073 0.0033686498234175495 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 67811 22859 LTIDDGIFEV True PC9_epitope_Rep5 1120.56520576568 1120.56467496793 92.925 1 0.08704470179260808 0.0033686498234175495 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 6479 6277 APTGDLPRA True PC9_epitope_Rep2 896.4715801643599 896.47048993586 29.54 2 0.08704224202117497 0.0033686498234175495 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 1503 6396 AEEPASVTP True H1975_Epitope_Rep3 899.42362691243 899.42252993586 29.579 2 0.08703971113381605 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF'] 113899 15928 TRIDLIQKL True PC9_epitope_Rep5 1098.67609362734 1098.6749899358601 66.259 2 0.08703410362555583 0.0033686498234175495 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6'] 92176 14972 RQFGFIVL True NCI_RA007_Epitope_Rep3 978.5650866263799 978.56398993586 66.335 2 0.08703335135692018 0.0033686498234175495 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 130876 4515 VVGVGMTK True NCI_RA007_Epitope_Rep3 789.44186025921 789.44076993586 24.616 2 0.08700486215381037 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 46743 19894 IVAPGTFEV True PC9_epitope_Rep2 931.5014833103099 931.5009349679301 81.917 1 0.08700292954633547 0.0033686498234175495 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 45141 20473 IQYIPTELDQV True PC9_epitope_Rep4 1317.68163250025 1317.68052993586 86.896 2 0.08699772141060609 0.0033686498234175495 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 136756 23481 YIPSYFDFV True PC9_epitope_Rep1 1149.53826274185 1149.5371699358602 95.105 2 0.08699640781096148 0.0033686498234175495 0.9438714419765777 ['ENSG00000117597|ENST00000491415|UTP25', 'ENST00000457820.1_2_1:210016778-210017042:+|nuORF'] 31689 17543 GEIFNVQLP True H1975_Epitope_Rep2 1015.5338460677499 1015.53274993586 72.785 2 0.0869955994327506 0.0033686498234175495 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 2679 11486 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 49.236 1 0.08698019827228111 0.0033686498234175495 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 84584 8690 QHDPETSVL True PC9_epitope_Rep1 1024.48253877088 1024.4814499358602 38.266 2 0.0869753070956327 0.0033686498234175495 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 73867 18730 NHFPGSFQI True PC9_epitope_Rep5 1045.49812926537 1045.4970299358602 77.06 2 0.08697503389096925 0.0033686498234175495 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219610891-219612857:+|nuORF', 'ENST00000475950.5_1_2:219610891-219612096:+|nuORF'] 106815 15608 SYGSVFKAI True PC9_epitope_Rep4 970.5123823471799 970.51128993586 67.96 2 0.08697260942265891 0.0033686498234175495 0.9438714419765777 ['STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion', 'ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 7004 9807 AQQPTAVQV True PC9_epitope_Rep5 940.4977949121998 940.49668993586 42.69 2 0.08696634784858394 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 116886 18400 TYNYPVHYF True PC9_epitope_Rep3 1202.53965972418 1202.53856993586 75.983 2 0.086962920392964 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 86212 9454 QPVSGTQVV True PC9_epitope_Rep5 913.48689587533 913.48578993586 41.321 2 0.08696046165670207 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 70609 21069 MAAAWPLLL True H1975_Epitope_Rep2 984.5466596809199 984.5461149679301 87.209 1 0.08696035410765424 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 102466 6843 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 31.727 2 0.08694891465059446 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 24679 9004 FATHAAALSVR True PC9_epitope_Rep3 1142.6196413803798 1142.61799490379 39.578 3 0.08694623892654423 0.0033686498234175495 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 139209 18167 YSVEYLPKV True PC9_epitope_Rep5 1096.5804619069997 1096.57936993586 74.888 2 0.0869075251790882 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 65259 11661 LSEGVTISY True H1975_Epitope_Rep3 967.4862271689901 967.4856749679301 49.989 1 0.08690537165249201 0.0033686498234175495 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 84824 20383 QHLPYIQIL True PC9_epitope_Rep2 1123.6389798426299 1123.6378899358601 83.828 2 0.08689842724133726 0.0033686498234175495 0.9438714419765777 ['ENST00000576646.7_1_17:1412470-1416845:-|nuORF', 'nc|ENSG00000132376|Q9BT40-2|INPP5K', 'ENST00000350761.9_1_17:1399119-1419845:-|nuORF', 'ENSG00000132376|ENST00000421807|INPP5K'] 96295 7763 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 34.808 2 0.08689724892445776 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 132762 17779 VYSPHVLNL True PC9_epitope_Rep3 1040.5654805492 1040.5643899358602 73.587 2 0.08689487550704869 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 138470 7943 YRGGSISV True PC9_epitope_Rep1 837.43446637965 837.43336993586 35.375 2 0.0868916070073451 0.0033686498234175495 0.9438714419765777 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1'] 18793 7784 ELDSNLYR True NCI_RA007_Epitope_Rep1 1008.48762415132 1008.48652993586 34.268 2 0.08688838718709498 0.0033686498234175495 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 140635 15248 YYPAKIEAI True PC9_epitope_Rep1 1066.5698972233 1066.5688099358601 63.471 2 0.08688048007320004 0.0033686498234175495 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.V175Sfs*48|1|0.38|ENSG00000129292|chr8:132803834-132803834|G/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 35710 5863 GTSEFITGK True NCI_RA007_Epitope_Rep5 938.4709114580198 938.46980993586 29.237 2 0.08687969238189167 0.0033686498234175495 0.9438714419765777 ['ENSG00000110002|ENST00000456829|VWA5A'] 35007 9565 GRAPGGLSL True PC9_epitope_Rep4 826.4661008611 826.4650099358599 44.41 2 0.08687480850727941 0.0033686498234175495 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 107778 19665 TAM[Oxidation]DVVYAL True PC9_epitope_Rep3 997.4790339940099 997.47792993586 80.877 2 0.08686456305286644 0.0033686498234175495 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 84211 9116 QETSSIVSV True NCI_RA007_Epitope_Rep3 948.47639076128 948.47528993586 42.944 2 0.0868574871029717 0.0033686498234175495 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5'] 53809 13272 KYFLWEEKF True NCI_RA007_Epitope_Rep5 1288.6492101731599 1288.64810993586 57.73 2 0.08684232400767701 0.0033686498234175495 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 9751 12294 AYLEAIHNF True NCI_RA007_Epitope_Rep2 1076.52909504048 1076.5279899358602 52.422 2 0.08684197598119503 0.0033686498234175495 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1'] 34488 16348 GQDGSVVQF True PC9_epitope_Rep1 935.4348603024699 935.43376993586 67.703 2 0.08684053674325139 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2', 'ENSG00000177688|ENST00000326669|SUMO4', 'ENSG00000184900|ENST00000332859|SUMO3', 'nc|ENSG00000184900|P55854-2|SUMO3', 'ENST00000466861.1_1_21:46233737-46238015:-|nuORF', 'ENST00000511179.1_1_17:48313271-48313352:+|nuORF'] 64098 14253 LQEDPPVGV True PC9_epitope_Rep1 952.4865615221598 952.48546993586 59.649 2 0.08683771835859276 0.0033686498234175495 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 40037 6636 HQVPAVSSV True PC9_epitope_Rep2 922.4872302285 922.48612993586 30.935 2 0.08682525727598533 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 104127 16540 SRYPDQWIV True PC9_epitope_Rep6 1162.57710786206 1162.5760099358602 76.06 2 0.0868186493111644 0.0033686498234175495 0.9438714419765777 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 75748 12402 NRAEDSICL True PC9_epitope_Rep5 1019.4705941881899 1019.46948993586 52.702 2 0.08681278709845704 0.0033686498234175495 0.9438714419765777 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 54825 13694 LAFNGDLAKA True PC9_epitope_Rep2 1018.5447451046199 1018.54364993586 57.964 2 0.08680909913369844 0.0033686498234175495 0.9438714419765777 ['TNKS1BP1|p.S1554Vfs*72|1|0.21|ENSG00000149115|chr11:57302483-57302483|G/-|frameshift_variant', 'ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000528882.5_1_11:57067274-57087552:-|nuORF'] 25399 12996 FEIQGTTVP True H1975_Epitope_Rep2 990.5022115863 990.50110993586 55.107 2 0.08680422906889186 0.0033686498234175495 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 28096 17445 FREDMPSIL True PC9_epitope_Rep6 1106.5430308524599 1106.54192993586 79.719 2 0.08679904186361906 0.0033686498234175495 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 43249 20499 IHDGFGFM[Oxidation]L True PC9_epitope_Rep1 1051.4797027003501 1051.47860993586 83.661 2 0.08678971123934665 0.0033686498234175495 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 4265 20166 AIIGGMFTV True PC9_epitope_Rep6 907.48372507119 907.48317496793 90.242 1 0.08678272046462777 0.0033686498234175495 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 132928 22128 VYTVVDEMF True PC9_epitope_Rep5 1101.5052483614097 1101.50467496793 90.15 1 0.08676859438567251 0.0033686498234175495 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 123564 18246 VIIKGLEEI True PC9_epitope_Rep2 1012.6168474157199 1012.61574993586 75.503 2 0.08676651128181985 0.0033686498234175495 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 126996 13383 VPWMPPGKSSA True PC9_epitope_Rep3 1155.57466533391 1155.5735699358602 56.508 2 0.08676053655949324 0.0033686498234175495 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 25628 11406 FEVQVGPEA True H1975_Epitope_Rep2 974.4709114580198 974.46980993586 48.923 2 0.08675951539685119 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 98555 22012 SILSSLTSV True PC9_epitope_Rep1 905.5069626135701 905.50586993586 89.492 2 0.08674995167736546 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 31456 13130 GEEDLFVSA True H1975_Epitope_Rep2 965.43419159613 965.43364496793 55.626 1 0.08674713776702457 0.0033686498234175495 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 53789 14629 KYFLKPEVL True PC9_epitope_Rep2 1135.6641319613097 1135.66249490379 61.538 3 0.08673446946791463 0.0033686498234175495 0.9438714419765777 ['NCEH1|p.L331Sfs*53|1|0.13|ENSG00000144959|chr3:172633831-172633831|G/-|frameshift_variant', 'ENSG00000144959|ENST00000475381|NCEH1', 'nc|ENSG00000144959|Q6PIU2-2|NCEH1', 'nc|ENSG00000144959|Q6PIU2-3|NCEH1'] 4843 23937 ALFGALFLA True PC9_epitope_Rep3 921.5323895157699 921.53184496793 97.359 1 0.08673076748055632 0.0033686498234175495 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 71010 7521 [Acetylation]-M[Oxidation]EQVNELK True H1975_Epitope_Rep3 1047.49066162317 1047.4895699358601 33.909 2 0.0867150996672615 0.0033686498234175495 0.9438714419765777 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'ENST00000540736.1_1_11:63953733-63960840:+|nuORF'] 103673 4776 SRDPTQAIA True PC9_epitope_Rep4 957.4879585044898 957.48686993586 24.943 2 0.08670952978138259 0.0033686498234175495 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2', 'nc|ENSG00000103479|Q08999-2|RBL2'] 114060 8498 TRNPVSEEL True PC9_epitope_Rep4 1043.52473793603 1043.52364993586 40.161 2 0.086707592943463 0.0033686498234175495 0.9438714419765777 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.C424Afs*36|1|0.25|ENSG00000168411|chr16:74636502-74636502|A/-|frameshift_variant'] 83783 8011 QEEISAEVA True H1975_Epitope_Rep2 974.4556553166998 974.45454993586 35.761 2 0.08669599865120008 0.0033686498234175495 0.9438714419765777 ['ENST00000463912.5_1_7:139083347-139097327:+|nuORF', 'nc|ENSG00000269955|Q9Y383-3|LUC7L2', 'nc|ENSG00000269955|Q9Y383-2|LUC7L2', 'ENSG00000146963|ENST00000354926|LUC7L2', 'nc|ENSG00000164898|Q96HJ9-2|FMC1'] 61153 18929 LLDGFLVNY True H1975_Epitope_Rep2 1052.55424715916 1052.5531499358601 78.577 2 0.08669283523384502 0.0033686498234175495 0.9438714419765777 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D'] 108264 16039 TEAPPIIFATP True H1975_Epitope_Rep3 1155.6175756917098 1155.61646993586 67.151 2 0.08669280498750832 0.0033686498234175495 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 21090 5221 ERDPGGITA True PC9_epitope_Rep1 914.4457593393399 914.44466993586 24.931 2 0.08668664550449073 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C', 'ENSG00000099385|ENST00000215115|BCL7C'] 132798 15573 VYSQIPAAVKL True PC9_epitope_Rep6 1187.6914093383098 1187.6903099358601 72.111 2 0.08668417139949063 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 53524 17581 KVPEWVDTV True PC9_epitope_Rep1 1071.5600608155898 1071.5589699358602 72.417 2 0.08667829439451409 0.0033686498234175495 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 89200 11097 REIFFPETA True NCI_RA007_Epitope_Rep3 1108.5553097883198 1108.5542099358602 50.753 2 0.08667748737001546 0.0033686498234175495 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 8271 4294 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 23.102 2 0.08667051883593249 0.0033686498234175495 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 108960 7786 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46908993586 34.904 2 0.08666936196287431 0.0033686498234175495 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 59828 15048 LHDPVSISV True PC9_epitope_Rep2 965.5181960036101 965.51708993586 63.141 2 0.08665948252563997 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 97793 13909 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 58.337 2 0.08665231645252401 0.0033686498234175495 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 1749 17195 AEGWMDWAA True H1975_Epitope_Rep1 1035.4120166829098 1035.41147496793 71.596 1 0.08663906531280012 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1'] 118139 11060 VAVEPGAAV True PC9_epitope_Rep2 811.4439684341899 811.44341496793 47.86 1 0.08663628271042732 0.0033686498234175495 0.9438714419765777 ['ENSG00000171421|ENST00000505059|MRPL36'] 69955 14874 LYEEKFESI True PC9_epitope_Rep4 1156.5652057656798 1156.5641099358602 65.151 2 0.08663455979537055 0.0033686498234175495 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'nc|ENSG00000181555|Q9BYW2-2|SETD2'] 23620 20143 EYFKSFNF True PC9_epitope_Rep3 1080.4916469026 1080.4905499358601 82.734 2 0.08662872281005482 0.0033686498234175495 0.9438714419765777 ['ENSG00000151470|ENST00000425929|C4orf33'] 3861 8606 AHAVGNVEL True PC9_epitope_Rep4 908.4715801643599 908.47048993586 40.584 2 0.0866168401703912 0.0033686498234175495 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ARHGAP15-KYNU|2|fusion', 'ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU', 'KYNU|p.F306Lfs*17|1|0.1|ENSG00000115919|chr2:143029640-143029640|T/-|frameshift_variant', 'KYNU-ARHGAP15|1|fusion'] 9969 18721 AYSEYVNNF True PC9_epitope_Rep1 1105.47163973401 1105.4705499358602 76.8 2 0.08661658569672089 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000104728|O15013-7|ARHGEF10', 'nc|ENSG00000104728|O15013-4|ARHGEF10', 'ENSG00000104728|ENST00000349830|ARHGEF10', 'nc|ENSG00000104728|O15013-6|ARHGEF10', 'nc|ENSG00000104728|O15013|ARHGEF10', 'ENST00000523711.5_1_8:1824717-1874701:+|nuORF'] 113374 10773 TQLGDLHTC True PC9_epitope_Rep5 986.44913046762 986.44802993586 46.43 2 0.0866164251307206 0.0033686498234175495 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 13184 11766 DLTDYLM[Oxidation]K True NCI_RA007_Epitope_Rep2 1013.47394861357 1013.47337496793 50.365 1 0.08660161890585848 0.0033686498234175495 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 7317 14476 ARSDKPIFTL True PC9_epitope_Rep1 1146.6397081186199 1146.63805490379 60.508 3 0.08659950091111225 0.0033686498234175495 0.9438714419765777 ['ENSG00000136045|ENST00000412830|PWP1'] 120675 12518 VGAPKIPSV True PC9_epitope_Rep2 866.5225531080599 866.52144993586 53.458 2 0.08659683750584687 0.0033686498234175495 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 115709 11088 TVLERVEGA True PC9_epitope_Rep1 972.5240096600398 972.52290993586 47.538 2 0.08659673250893532 0.0033686498234175495 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 4073 10648 AHSEPLAL True PC9_epitope_Rep1 836.43921740692 836.43812993586 45.849 2 0.08658757077649078 0.0033686498234175495 0.9438714419765777 ['ENSG00000132017|ENST00000254337|DCAF15'] 119046 9790 VEGPAFTDAIR True H1975_Epitope_Rep1 1174.59823722946 1174.5971499358602 42.585 2 0.08658058954593324 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 6071 14914 APMPPIIHA True PC9_epitope_Rep3 945.51060852537 945.50950993586 62.502 2 0.0865658683140941 0.0033686498234175495 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 95648 11954 SAVPPGTSL True PC9_epitope_Rep3 827.43888305375 827.43778993586 51.003 2 0.08656093631990057 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 6488 5689 APTGDLPRA True PC9_epitope_Rep6 896.4715801643599 896.47048993586 30.004 2 0.08655622633437578 0.0033686498234175495 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 65115 10463 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42816496793 45.263 1 0.08655318701893272 0.0033686498234175495 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 95063 9489 RYSGNQVLF True NCI_RA007_Epitope_Rep4 1082.55089311422 1082.5497899358602 43.351 2 0.08654786988025738 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 115031 5378 TTNDIVISK True NCI_RA007_Epitope_Rep4 989.53932537101 989.53822993586 27.254 2 0.08653887201808 0.0033686498234175495 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 6676 7642 AQAPDLQRV True PC9_epitope_Rep4 996.5352430500799 996.53414993586 36.775 2 0.08653764260480001 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 40118 11623 HRDLPIKL True PC9_epitope_Rep5 990.5974493838199 990.59634993586 49.703 2 0.08652189340181626 0.0033686498234175495 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 1605 9885 AEFQVKITA True H1975_Epitope_Rep3 1005.5494961318899 1005.54838993586 43.054 2 0.08652044224058114 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 114418 9290 TSDTLNNVGY True H1975_Epitope_Rep3 1082.48801807414 1082.4869299358602 40.728 2 0.08651913573169052 0.0033686498234175495 0.9438714419765777 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 71934 11149 MPSSVPLRA True PC9_epitope_Rep5 956.5113368013599 956.51022993586 47.869 2 0.08651432192387155 0.0033686498234175495 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 88076 15013 QVVGKLIEV True PC9_epitope_Rep2 983.6015317047498 983.60042993586 63.002 2 0.08650695928716567 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 23821 17652 EYLKVDAQF True PC9_epitope_Rep1 1111.5549754351498 1111.5538699358601 72.691 2 0.0865013536408268 0.0033686498234175495 0.9438714419765777 ['ENSG00000134684|ENST00000373477|YARS1', 'ENST00000481895.5_1_1:33256818-33282875:-|nuORF', 'ENST00000466052.1_1_1:33256818-33263474:-|nuORF', 'ENST00000470377.1_1_1:33256708-33272178:-|nuORF'] 112568 9888 TPALIALR True H1975_Epitope_Rep3 853.53853752537 853.53744993586 43.065 2 0.08650127709687867 0.0033686498234175495 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENSG00000187134|ENST00000380872|AKR1C1'] 115804 14856 TVMDEIHTV True PC9_epitope_Rep2 1043.49574630687 1043.49464993586 62.408 2 0.0864963553513867 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 1932 8605 AEIPEEHIP True H1975_Epitope_Rep1 1033.50802524273 1033.5069299358602 38.026 2 0.08647987066379206 0.0033686498234175495 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 75742 18540 NRAATLMML True PC9_epitope_Rep3 1019.5256069665099 1019.52450993586 76.534 2 0.08646384338011467 0.0033686498234175495 0.9438714419765777 ['ENSG00000168259|ENST00000457167|DNAJC7', 'nc|ENSG00000168259|Q99615-2|DNAJC7'] 46792 19939 IVDGMGITGV True PC9_epitope_Rep5 960.4950180308799 960.49392993586 81.75 2 0.08645783357325248 0.0033686498234175495 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525178.5_1_11:108217294-108236232:+|nuORF', 'ATM|p.D2913H|1|0.3|ENSG00000149311|chr11:108353831-108353831|G/C|missense_variant'] 29262 18322 FVDGSAIQV True PC9_epitope_Rep1 934.47599683846 934.47488993586 75.264 2 0.0864567035988875 0.0033686498234175495 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 87028 10914 QSDGGGLLY True H1975_Epitope_Rep2 908.4239612655999 908.4234149679301 47.011 1 0.08644680631945652 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'ENST00000418472.6_1_18:46856042-46938282:-|nuORF'] 132916 16608 VYTVVDEMF True NCI_RA007_Epitope_Rep3 1101.5052483614097 1101.5041499358601 73.109 2 0.0864398327327134 0.0033686498234175495 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 34853 8348 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42828993586 39.568 2 0.08643813719705665 0.0033686498234175495 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 85966 17878 QPFGDHIISV True PC9_epitope_Rep2 1111.56620882519 1111.5651099358602 74.07 2 0.08643499139421404 0.0033686498234175495 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 102343 5115 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 27.359 2 0.08642936476333846 0.0033686498234175495 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 30127 9986 FYQEHPDL True PC9_epitope_Rep6 1047.4661604307498 1047.4650699358601 48.964 2 0.08642891443681501 0.0033686498234175495 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 135134 18770 YAQGLLTGV True PC9_epitope_Rep4 920.4967322830399 920.49562993586 80.281 2 0.08641997994453746 0.0033686498234175495 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 35674 4630 GTNPGIITK True NCI_RA007_Epitope_Rep1 899.50763131991 899.50652993586 22.098 2 0.08641560365163627 0.0033686498234175495 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 11922 12911 DHSGQVTIL True PC9_epitope_Rep5 968.49270953176 968.49160993586 54.674 2 0.08641014304659331 0.0033686498234175495 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 104323 11282 SSEQTFM[Oxidation]YY True H1975_Epitope_Rep2 1170.4539414449798 1170.45337496793 48.443 1 0.08640533190677496 0.0033686498234175495 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 131284 6322 VVQNGFFAHK True NCI_RA007_Epitope_Rep4 1145.5981776598098 1145.59654490379 30.921 3 0.08640437380480137 0.0033686498234175495 0.9438714419765777 ['ENSG00000132965|ENST00000380490|ALOX5AP'] 76579 6531 NTDSPLRY True H1975_Epitope_Rep3 964.46140940348 964.4608649679301 30.088 1 0.08640304960877343 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 91834 12283 RPNDIMAEV True PC9_epitope_Rep4 1043.50697969691 1043.50588993586 55.063 2 0.08640289021897157 0.0033686498234175495 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 120057 21941 VFFKELIQEF True PC9_epitope_Rep2 1298.6910749851397 1298.68996993586 89.872 2 0.08639977943265062 0.0033686498234175495 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 5233 11076 ALQEMVHQV True PC9_epitope_Rep4 1053.52771514149 1053.52660993586 50.381 2 0.08639411021075258 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 12515 15252 DLAGSIIGK True PC9_epitope_Rep1 872.4967322830399 872.49562993586 63.487 2 0.0863871891360366 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 17330 12774 EHDPSSIYL True PC9_epitope_Rep4 1059.48728979815 1059.48618993586 56.998 2 0.08637074802552107 0.0033686498234175495 0.9438714419765777 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-2|HEATR5B'] 43135 9641 IGPLGLSPK True NCI_RA007_Epitope_Rep2 880.5382031722 880.53710993586 42.116 2 0.08636492984642645 0.0033686498234175495 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12'] 11740 5584 DHHENKYLL True PC9_epitope_Rep6 1167.56727145435 1167.56563490379 29.526 3 0.0863553952847672 0.0033686498234175495 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 37493 18202 GYFEYIEENK True PC9_epitope_Rep5 1290.5768330785397 1290.5757299358602 75.024 2 0.08634670224699767 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF', 'ENST00000366525.8_2_1:245025904-245026177:-|nuORF'] 38985 11552 HKDAYQVIL True PC9_epitope_Rep2 1085.5869442697701 1085.58584993586 49.761 2 0.08633962602897619 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'ENST00000530300.1_1_11:43333659-43340360:+|nuORF'] 92227 6085 RQIKPYTL True NCI_RA007_Epitope_Rep4 1017.5971150306499 1017.59600993586 30.021 2 0.08633235271365312 0.0033686498234175495 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 21212 17441 ERFLSQVL True PC9_epitope_Rep4 990.5498304850599 990.54872993586 75.08 2 0.086332055110826 0.0033686498234175495 0.9438714419765777 ['ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1'] 105343 10640 STVSSVTQV True PC9_epitope_Rep5 906.4658260775799 906.46472993586 45.915 2 0.08632671108097421 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1'] 9628 21310 AYGGAFYAF True PC9_epitope_Rep2 965.42831837005 965.4277649679301 87.433 1 0.08632604168456706 0.0033686498234175495 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 6097 11584 APM[Oxidation]PPIIHA True PC9_epitope_Rep3 961.50552352537 961.50442993586 49.572 2 0.08632265785229316 0.0033686498234175495 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 134518 15624 WVDSDQLLY True H1975_Epitope_Rep1 1137.53423999057 1137.53367496793 65.383 1 0.08630906233110758 0.0033686498234175495 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 47071 17965 IVVDNVPQV True PC9_epitope_Rep1 981.5494961318899 981.54838993586 73.895 2 0.08630445881608784 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 28813 14706 FTDGDAALEF True H1975_Epitope_Rep3 1084.4713053808398 1084.4707749679299 61.939 1 0.08629997206014522 0.0033686498234175495 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 138942 5937 YSEGREFRY True H1975_Epitope_Rep3 1205.5465360097699 1205.54488490379 27.845 3 0.08629983922855329 0.0033686498234175495 0.9438714419765777 ['ENSG00000103126|ENST00000262320|AXIN1', 'nc|ENSG00000103126|O15169-2|AXIN1', 'ENST00000461023.5_1_16:343426-396314:-|nuORF'] 39390 17414 HLVPEVPTV True PC9_epitope_Rep3 989.55458151233 989.55348993586 72.153 2 0.08629964907580064 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 113675 16053 TRDELEWKL True PC9_epitope_Rep5 1188.6138872935999 1188.61278993586 66.735 2 0.08628949203873396 0.0033686498234175495 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 140110 21336 YVPPELITL True PC9_epitope_Rep4 1043.59029831471 1043.58920993586 90.237 2 0.08627840228601878 0.0033686498234175495 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 22244 10822 ETDNNIVVY True H1975_Epitope_Rep2 1065.4978544818498 1065.49727496793 46.656 1 0.08627117289658369 0.0033686498234175495 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 7915 13053 ATDDITELY True H1975_Epitope_Rep1 1039.47097102767 1039.47037496793 55.294 1 0.08626943393958518 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000466459.5_1_7:112097053-112108063:+|nuORF'] 72739 21128 MYTKLFVGF True PC9_epitope_Rep5 1104.5677890483198 1104.56668993586 86.33 2 0.08626288820576695 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'SMPD4|p.K500Sfs*21|2|0.35|ENSG00000136699|chr2:130155169-130155169|G/-|frameshift_variant', 'nc|ENSG00000136699|Q9NXE4-9|SMPD4', 'nc|ENSG00000136699|Q9NXE4-10|SMPD4', 'nc|ENSG00000136699|Q9NXE4-7|SMPD4', 'nc|ENSG00000136699|Q9NXE4-8|SMPD4', 'ENST00000482171.5_1_2:130912606-130913705:-|nuORF', 'ENST00000461187.5_1_2:130911777-130913705:-|nuORF'] 127095 14702 VQAPRLAAL True PC9_epitope_Rep5 937.5709002828098 937.56980993586 61.554 2 0.08625341967328737 0.0033686498234175495 0.9438714419765777 ['ENSG00000033100|ENST00000035307|CHPF2', 'nc|ENSG00000033100|Q9P2E5-2|CHPF2', 'CHPF2|p.Y186N|1|0.45|ENSG00000033100|chr7:151235340-151235340|T/A|missense_variant'] 40270 7710 HRNEVTVEL True PC9_epitope_Rep4 1095.56727145435 1095.5661699358602 37.045 2 0.0862529392357445 0.0033686498234175495 0.9438714419765777 ['KPNA3|p.N437Kfs*8|1|0.2|ENSG00000102753|chr13:49705682-49705683|-/T|frameshift_variant', 'ENSG00000102753|ENST00000261667|KPNA3'] 137183 14607 YLDSIPPGQYM True H1975_Epitope_Rep2 1282.5903749677 1282.58926993586 61.345 2 0.08624872074220427 0.0033686498234175495 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 32003 13222 GETIFVTAP True NCI_RA007_Epitope_Rep5 933.48074786573 933.47964993586 57.539 2 0.08624536485709312 0.0033686498234175495 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 2058 9979 AELGEAPVP True H1975_Epitope_Rep1 881.4494477374499 881.4488949679301 43.321 1 0.08624003189893834 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 44666 20792 IPLQDLVAA True PC9_epitope_Rep2 938.5436824754598 938.54258993586 85.418 2 0.08623750506556246 0.0033686498234175495 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 126599 5900 VPPPPPIAR True NCI_RA007_Epitope_Rep5 942.56508662638 942.56398993586 29.381 2 0.08622194179239326 0.0033686498234175495 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 77142 12971 NYDKVEKLF True PC9_epitope_Rep4 1154.5971746003 1154.59552490379 57.786 3 0.08621808211757483 0.0033686498234175495 0.9438714419765777 ['ENSG00000176102|ENST00000323959|CSTF3'] 1543 6761 AEETPPTSV True H1975_Epitope_Rep3 929.43419159613 929.43364496793 30.961 1 0.08621509027484425 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 67141 16450 LTDEAFEFY True H1975_Epitope_Rep2 1133.49170647225 1133.49117496793 68.494 1 0.08621108729081213 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 1137 7017 AEAPPSVAP True H1975_Epitope_Rep2 837.4232329896099 837.42212993586 31.916 2 0.08619715308470573 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 83224 14407 QAALEFHGV True PC9_epitope_Rep1 970.4872302284999 970.48612993586 60.24 2 0.08619643065383102 0.0033686498234175495 0.9438714419765777 ['ENSG00000187231|ENST00000428443|SESTD1'] 21279 14901 ERINNINIL True PC9_epitope_Rep6 1097.61930702721 1097.61820993586 69.308 2 0.08619259977872018 0.0033686498234175495 0.9438714419765777 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 29465 6352 FVIATSTK True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 31.109 2 0.08619161414560456 0.0033686498234175495 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 1091 7546 AEAPPAYTP True H1975_Epitope_Rep2 915.4337976733101 915.43270993586 33.977 2 0.08619050722010803 0.0033686498234175495 0.9438714419765777 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 35734 2608 GTSSVIVSR True NCI_RA007_Epitope_Rep5 904.4977949122 904.49668993586 14.735 2 0.08618582004397994 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 4128 14204 AHTPVIISV True PC9_epitope_Rep2 935.54401682863 935.54290993586 59.904 2 0.08618238802003686 0.0033686498234175495 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 21557 17328 ERSDTFINL True PC9_epitope_Rep2 1093.54038800017 1093.53928993586 71.912 2 0.0861805090971836 0.0033686498234175495 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 69379 12586 LVQGELVTA True PC9_epitope_Rep6 928.5229470308799 928.52184993586 59.856 2 0.08617337849139992 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1'] 17260 16773 EHASSLLEL True PC9_epitope_Rep2 997.5080252427299 997.50692993586 69.765 2 0.08617244677631522 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 71876 9304 MPNGDHIVSA True PC9_epitope_Rep3 1039.47567956863 1039.4745899358602 40.729 2 0.08616762732694143 0.0033686498234175495 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 21658 13192 ERTSFNYAM True PC9_epitope_Rep3 1117.4862442523297 1117.4851499358601 55.779 2 0.08616153375207133 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 21869 5044 ESEEYQERY True H1975_Epitope_Rep3 1231.49931103383 1231.4982099358601 24.522 2 0.08615389466523878 0.0033686498234175495 0.9438714419765777 ['ENST00000492316.5_1_6:30585621-30587787:+|nuORF', 'ENSG00000204568|ENST00000259873|MRPS18B'] 69844 13807 LYADVGGKQF True PC9_epitope_Rep5 1096.55530978832 1096.55477496793 58.128 1 0.0861538200530878 0.0033686498234175495 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 47755 7582 IYQRDPLKL True NCI_RA007_Epitope_Rep3 1144.6604435631998 1144.65880490379 36.955 3 0.08615300578025874 0.0033686498234175495 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 102595 16925 SQANRLFYL True PC9_epitope_Rep6 1110.5821932425 1110.58108993586 77.642 2 0.08614738494902449 0.0033686498234175495 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000497281.5_1_X:153763381-153774262:-|nuORF'] 110371 22818 TILPAIILV True PC9_epitope_Rep4 951.63685458431 951.6363049679301 95.991 1 0.0861367621346212 0.0033686498234175495 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 105973 20094 SVLGSLSSV True PC9_epitope_Rep5 847.4650978015901 847.46454496793 82.338 1 0.08613671286689892 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF'] 117843 9498 VAPEEHPVLL True H1975_Epitope_Rep1 1102.60225998074 1102.60116993586 41.454 2 0.08613602845254945 0.0033686498234175495 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 6599 18650 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 77.103 2 0.08613561127946286 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 86803 13450 QRNPQGFVL True PC9_epitope_Rep5 1057.5668775315298 1057.56578993586 56.751 2 0.08613270382571492 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 76268 11551 NSDNNTIFV True H1975_Epitope_Rep2 1022.46688870674 1022.46637496793 49.492 1 0.08612362997343036 0.0033686498234175495 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 85758 15268 QLVPALAKV True PC9_epitope_Rep4 937.5960524014899 937.59494993586 66.658 2 0.08612301539656038 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000158161|Q99504-2|EYA3', 'nc|ENSG00000158161|Q99504-4|EYA3', 'nc|ENSG00000158161|Q99504-5|EYA3', 'nc|ENSG00000158161|Q99504-3|EYA3', 'ENSG00000158161|ENST00000373871|EYA3'] 37140 17954 GVTEVLHGL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 73.851 2 0.08611520694418685 0.0033686498234175495 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1'] 22997 6232 EVISDEHGID True NCI_RA007_Epitope_Rep3 1112.4985827578398 1112.4974899358601 31.518 2 0.0861035844838625 0.0033686498234175495 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENST00000587204.1_1_18:12308291-12311096:+|nuORF'] 33052 8077 GKDGYNYTL True NCI_RA007_Epitope_Rep5 1029.47672511445 1029.47562993586 37.757 2 0.08609750595550168 0.0033686498234175495 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 103479 6515 SRAPSVATV True PC9_epitope_Rep1 886.4872302285 886.48612993586 29.863 2 0.08608545623602645 0.0033686498234175495 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 108823 6700 TEQPVTPEP True H1975_Epitope_Rep2 996.47639076128 996.47584496793 30.681 1 0.08608282536690638 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1'] 85968 18699 QPFGDHIISV True PC9_epitope_Rep3 1111.56620882519 1111.5651099358602 77.148 2 0.08607978480478007 0.0033929589316250915 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 132970 22243 VYVDDIYVI True PC9_epitope_Rep5 1097.56447748969 1097.5639749679299 90.565 1 0.08607490140120513 0.0033929589316250915 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 87713 21157 QVEEELFSV True PC9_epitope_Rep1 1078.51825557326 1078.51767496793 86.213 1 0.0860476673729745 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 103260 21257 SQTDFSQLL True PC9_epitope_Rep1 1037.50293986229 1037.50184993586 86.588 2 0.08604628238795965 0.0033929589316250915 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 85281 5403 QKSLSLSPG True NCI_RA007_Epitope_Rep3 915.5025459394699 915.50144993586 28.264 2 0.08603988371699683 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 6278 9426 APRPTIINA True PC9_epitope_Rep5 951.5501648382299 951.54906993586 41.212 2 0.08603758164701225 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 76062 12487 NRLPDGMAV True PC9_epitope_Rep5 971.48585032951 971.48474993586 53.03 2 0.08603394749811284 0.0033929589316250915 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 132500 7085 VYPERSTSY True PC9_epitope_Rep1 1100.51383889916 1100.51274993586 32.06 2 0.08603319808572608 0.0033929589316250915 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 6763 10271 AQEPGNYEV True PC9_epitope_Rep2 1005.4403396057298 1005.43924993586 44.84 2 0.08602946682307425 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 104052 6850 SRTPGQVL True PC9_epitope_Rep3 856.4766655447999 856.47556993586 31.363 2 0.08601837677057439 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.P626Lfs*11|1|0.21|ENSG00000120539|chr10:27170834-27170834|C/-|frameshift_variant'] 87660 5840 QVASTLKQV True PC9_epitope_Rep4 972.5603951687598 972.55928993586 29.329 2 0.08601726628834062 0.0033929589316250915 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 7560 16277 ASFNDTFVHV True PC9_epitope_Rep6 1135.5298233164701 1135.5287299358602 74.971 2 0.08601395081211602 0.0033929589316250915 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 113169 16785 TQDGNIYQL True PC9_epitope_Rep2 1050.4981888350198 1050.49767496793 69.812 1 0.08601181744658135 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 93773 9053 RTSTGIIGV True PC9_epitope_Rep6 902.5185303567799 902.51742993586 44.879 2 0.08599294641676927 0.0033929589316250915 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 94902 10186 RYPDRITLI True NCI_RA007_Epitope_Rep4 1145.65569253593 1145.65405490379 46.037 3 0.08597800807641406 0.0033929589316250915 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 107709 17721 TALLKIEGV True PC9_epitope_Rep3 942.57498260374 942.57388993586 73.361 2 0.08597184156379968 0.0033929589316250915 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 2608 7796 AESLQPVAA True H1975_Epitope_Rep2 884.4603467743199 884.4597949679301 34.934 1 0.0859704517394518 0.0033929589316250915 0.9438714419765777 ['ENSG00000038219|ENST00000040738|BOD1L1'] 71422 24359 MIPLLLAAL True PC9_epitope_Rep3 953.5983609006099 953.59726993586 99.012 2 0.08596825435028602 0.0033929589316250915 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 39686 8700 HPTENLIASA True PC9_epitope_Rep4 1051.52982331647 1051.5287299358602 40.959 2 0.08595756145208387 0.0033929589316250915 0.9438714419765777 ['ENSG00000196981|ENST00000330689|WDR5B'] 116928 12777 TYPDVNNSI True PC9_epitope_Rep6 1021.4716397340101 1021.47054993586 60.64 2 0.08594455022154009 0.0033929589316250915 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 96031 10224 SEALPSDIAA True H1975_Epitope_Rep2 972.47639076128 972.47584496793 44.332 1 0.08594322882387888 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 88979 3972 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 20.348 2 0.08594136709741432 0.0033929589316250915 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 24265 23017 FAADIISVL True PC9_epitope_Rep1 947.53278343859 947.53168993586 93.332 2 0.0859371452596946 0.0033929589316250915 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 84807 17560 QHITLPVSV True PC9_epitope_Rep3 992.5654805492 992.56438993586 72.73 2 0.0859359561943539 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5', 'NFAT5|p.L1061Ffs*35|2|0.25|ENSG00000102908|chr16:69693055-69693056|-/T|frameshift_variant'] 117017 16331 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.52387496793 67.952 1 0.08591229843702201 0.0033929589316250915 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 21786 8582 ESDGKSRWFY True H1975_Epitope_Rep3 1273.5727507576098 1273.57111490379 38.002 3 0.08590500818431712 0.0033929589316250915 0.9438714419765777 ['ENSG00000146476|ENST00000367294|ARMT1'] 21422 10321 ERNNTRLLL True PC9_epitope_Rep5 1127.64110510095 1127.63944490379 44.685 3 0.08588451422831682 0.0033929589316250915 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA1-ALDH3B1|1|fusion', 'PPFIA2|p.N382Tfs*10|1|0.1|ENSG00000139220|chr12:81374755-81374755|T/-|frameshift_variant', 'PPFIA2|p.A489Lfs*3|1|0.65|ENSG00000139220|chr12:81368742-81368742|C/-|frameshift_variant', 'ENST00000602716.5_1_19:49631560-49640169:+|nuORF', 'ENST00000421230.6_1_19:49631605-49643027:+|nuORF', 'nc|ENSG00000143847|O75335|PPFIA4', 'ENSG00000177380|ENST00000334186|PPFIA3', 'nc|ENSG00000177380|O75145-2|PPFIA3', 'nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'ENSG00000143847|ENST00000295706|PPFIA4'] 109779 16056 THISPNAIF True PC9_epitope_Rep1 998.5185303567799 998.51742993586 66.573 2 0.08588259887123431 0.0033929589316250915 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant'] 46508 9788 ITPQTIHGV True PC9_epitope_Rep1 964.5341804209198 964.53308993586 42.511 2 0.08585042933012699 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 9079 23242 AVLALITLG True PC9_epitope_Rep2 869.55860426361 869.55805496793 94.883 1 0.08585008744125358 0.0033929589316250915 0.9438714419765777 ['nc|ENSG00000166086|Q9BX67-2|JAM3', 'ENSG00000166086|ENST00000299106|JAM3'] 115626 22639 TVISILNTI True PC9_epitope_Rep5 972.58554728744 972.58499496793 92.082 1 0.08583853963735787 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 130299 6054 VTTGGMVLK True NCI_RA007_Epitope_Rep5 904.5051887917599 904.50408993586 29.969 2 0.08583671069694106 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000173369|P02746|C1QB', 'ENSG00000173369|ENST00000509305|C1QB'] 48856 16850 KESHFQEVL True PC9_epitope_Rep3 1115.56112344475 1115.56002993586 69.966 2 0.0858308454060186 0.0034128768384842495 0.9438714419765777 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128446747-128451900:+|nuORF'] 43411 17694 IHSEPLGVVL True PC9_epitope_Rep2 1062.60734536118 1062.6062499358602 73.34 2 0.08582347705412703 0.0034128768384842495 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 35027 15878 GRAPQVLVL True PC9_epitope_Rep5 951.5865503469499 951.58544993586 66.067 2 0.08581637307003842 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 11724 16194 DHGGVIVAI True PC9_epitope_Rep1 879.48141657207 879.48030993586 67.107 2 0.08581483152478257 0.0034128768384842495 0.9438714419765777 ['ENSG00000184985|ENST00000507866|SORCS2'] 52289 12708 KPAEFTIDA True PC9_epitope_Rep3 990.5022115862998 990.50110993586 53.904 2 0.08581353692895438 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant', 'FLNC|p.V684L|1|0.18|ENSG00000128591|chr7:128841496-128841496|G/C|missense_variant'] 471 8883 AAMPGFIAK True NCI_RA007_Epitope_Rep4 904.4840594243599 904.48296993586 40.995 2 0.0858090263028724 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK', 'ENST00000508867.5_1_5:74842847-74877278:+|nuORF', 'ENST00000506928.5_1_5:74842847-74879138:+|nuORF'] 101014 9968 SLTGHISTV True PC9_epitope_Rep1 913.4868958753301 913.48578993586 43.206 2 0.08579415887087023 0.0034128768384842495 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 41194 16829 IAAGIFNDL True NCI_RA007_Epitope_Rep5 932.4967322830399 932.49618496793 71.482 1 0.0857909736639302 0.0034128768384842495 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 64049 14028 LQDPNHLTL True PC9_epitope_Rep1 1049.55055876105 1049.54946993586 58.797 2 0.08579053204301038 0.0034128768384842495 0.9438714419765777 ['KCTD21|p.H177R|1|0.41|ENSG00000188997|chr11:78174025-78174025|T/C|missense_variant', 'ENSG00000188997|ENST00000340067|KCTD21'] 24784 16990 FAYGYIEDL True H1975_Epitope_Rep2 1089.50187723313 1089.5007899358602 70.601 2 0.08578119471934913 0.0034128768384842495 0.9438714419765777 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 132208 9329 VYKDHQTITI True PC9_epitope_Rep5 1216.6451874218799 1216.6435349037902 40.837 3 0.08575978700746825 0.0034128768384842495 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 19364 6038 ELNITAAK True PC9_epitope_Rep6 858.4810822188999 858.47998993586 31.58 2 0.08575568910845556 0.0034128768384842495 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 3070 10241 AGAEGFVRV True PC9_epitope_Rep6 904.4766655447999 904.47556993586 50.053 2 0.08575140072582484 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 117127 18537 TYSPALNKMF True PC9_epitope_Rep1 1170.5743309807401 1170.57377496793 76.092 1 0.08575093284182769 0.0034128768384842495 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 113787 6223 TRDSKPIAL True PC9_epitope_Rep5 999.5712942056299 999.57018993586 28.916 2 0.0857386843783208 0.0034128768384842495 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 101910 11177 SPLLLQAKA True PC9_epitope_Rep4 939.5753169569099 939.57420993586 50.772 2 0.08573530122307751 0.0034128768384842495 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 31032 23110 GAVPIFIEL True PC9_epitope_Rep2 957.5535188831699 957.55297496793 94.383 1 0.08573401867103775 0.0034128768384842495 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'ENSG00000025800|ENST00000373625|KPNA6'] 21141 9091 ERDSQTQAIL True PC9_epitope_Rep1 1159.5833154413099 1159.5822099358602 39.82 2 0.08572522197060362 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 103299 16295 SQTSATFQL True PC9_epitope_Rep4 981.4767251144499 981.47562993586 70.637 2 0.08572088984622252 0.0034128768384842495 0.9438714419765777 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 86705 7019 QRIDSDDAL True PC9_epitope_Rep4 1031.4883524273098 1031.48724993586 34.247 2 0.08572006138068722 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 11760 16989 DHIHIIAL True PC9_epitope_Rep1 930.52870111766 930.52760993586 70.172 2 0.0857164200169673 0.0034128768384842495 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 61280 16856 LLDTELDLY True H1975_Epitope_Rep3 1093.55430672881 1093.5532099358602 70.388 2 0.08571220449969154 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 106477 15267 SVVGQIAKL True PC9_epitope_Rep2 913.5596668927699 913.55856993586 64.001 2 0.08569798219389205 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000106853|Q14914-2|PTGR1', 'ENSG00000106853|ENST00000407693|PTGR1'] 136617 11835 YIDEGRLVL True NCI_RA007_Epitope_Rep4 1076.5866099165999 1076.58550993586 52.504 2 0.08569729476274796 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1', 'SOAT1|p.R253Pfs*31|1|0.16|ENSG00000057252|chr1:179341284-179341285|-/C|frameshift_variant'] 14003 8153 DRTGTGTLSV True PC9_epitope_Rep4 1005.50908787189 1005.50798993586 38.815 2 0.08569278833539161 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 102435 10245 SPVYVGRVV True PC9_epitope_Rep6 974.5549158654999 974.55380993586 50.07 2 0.08568546326407975 0.0034128768384842495 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 89656 9729 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 42.409 2 0.08567368633143568 0.0034128768384842495 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 106070 19381 SVLVSVSEV True PC9_epitope_Rep3 917.50696261357 917.50586993586 79.772 2 0.08567175224885819 0.0034128768384842495 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 92208 3121 RQHNTEIRM True NCI_RA007_Epitope_Rep2 1183.5880239822698 1183.58638490379 16.765 3 0.08566865354973689 0.0034128768384842495 0.9438714419765777 ['FKBP15|p.G1133Vfs*45|2|0.29|ENSG00000119321|chr9:113169311-113169311|C/-|frameshift_variant', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'ENSG00000119321|ENST00000238256|FKBP15'] 8807 22037 AVFPDDMPTL True PC9_epitope_Rep3 1104.51614739828 1104.5150499358601 90.063 2 0.08566767046264818 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 138457 11050 YRFGDSQQL True PC9_epitope_Rep6 1112.5250722892 1112.5239699358601 53.414 2 0.0856534994059853 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 46266 16157 ITDVIIGFQ True NCI_RA007_Epitope_Rep2 1004.5542471591598 1004.5536749679301 67.573 1 0.08564944409994305 0.0034128768384842495 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 113186 11326 TQDGTPITV True PC9_epitope_Rep6 930.4658260775799 930.46472993586 54.59 2 0.08564530823458348 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 11908 13305 DHSATIVSI True PC9_epitope_Rep4 941.48181049489 941.48070993586 59.073 2 0.0856266178291386 0.0034128768384842495 0.9438714419765777 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75'] 39767 12773 HQADIGEYV True PC9_epitope_Rep3 1030.47197408718 1030.47086993586 54.152 2 0.08562494816655308 0.0034128768384842495 0.9438714419765777 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7', 'ENST00000562523.1_1_16:69375146-69375552:+|nuORF'] 74100 15518 NHVPVITTL True PC9_epitope_Rep1 992.5654805492001 992.56438993586 64.513 2 0.08562444666029317 0.0034128768384842495 0.9438714419765777 ['ENST00000609454.5_1_22:38228707-38236239:-|nuORF', 'ENST00000498417.5_1_22:38228707-38229954:-|nuORF', 'ENSG00000100124|ENST00000215941|ANKRD54'] 24274 14271 FAAGETFL True H1975_Epitope_Rep1 854.41741933318 854.4168749679301 60.077 1 0.08562039644869086 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 45855 11392 ISQIVSSITAS True H1975_Epitope_Rep1 1104.60265390356 1104.6020749679299 48.798 1 0.08562020618260541 0.0034128768384842495 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 134871 12034 YAAQPELL True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 51.369 1 0.08559885102867107 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 105469 6041 SVASPFTSK True NCI_RA007_Epitope_Rep3 922.4759968384601 922.47488993586 30.742 2 0.08559482076800416 0.0034128768384842495 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENSG00000127249|ENST00000342695|ATP13A4', 'ENSG00000187527|ENST00000342358|ATP13A5'] 88279 18590 QYGGDLTNTF True PC9_epitope_Rep2 1114.49310345458 1114.49200993586 76.858 2 0.08558390891759819 0.0034128768384842495 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 110148 21818 TIDDGIFEV True PC9_epitope_Rep5 1007.48114178855 1007.48057496793 88.955 1 0.08558200779459142 0.0034128768384842495 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 36466 22394 GVISGLFEL True PC9_epitope_Rep4 933.5171333744499 933.51658496793 94.372 1 0.08557998530204886 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 39778 13696 HQDLSTPVL True PC9_epitope_Rep3 1008.52400966004 1008.52290993586 57.759 2 0.08557773447004687 0.0034128768384842495 0.9438714419765777 ['ENSG00000122678|ENST00000242248|POLM', 'ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 116918 13661 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47054993586 60.438 2 0.08557665236884347 0.0034128768384842495 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 9632 20611 AYGGAFYAF True PC9_epitope_Rep4 965.42831837005 965.4272299358599 87.434 2 0.08556855603155362 0.0034128768384842495 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 25429 10305 FELFADKVPK True H1975_Epitope_Rep1 1192.6492101731599 1192.64755490379 44.583 3 0.08556710380228956 0.0034128768384842495 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA'] 95120 7130 RYVPRASYF True NCI_RA007_Epitope_Rep3 1157.5981776598098 1157.5970899358601 35.166 2 0.08555679218166841 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 74588 13399 NLDPLTETY True H1975_Epitope_Rep1 1064.50260550912 1064.5015099358602 56.651 2 0.08555165899435554 0.0034128768384842495 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 106896 20006 SYILRPVAF True PC9_epitope_Rep5 1064.60186605792 1064.6007699358602 82.007 2 0.0855474213441956 0.0034128768384842495 0.9438714419765777 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.G520Afs*35|1|0.16|ENSG00000156222|chr15:84935495-84935495|G/-|frameshift_variant'] 107176 8199 SYNPITHQL True NCI_RA007_Epitope_Rep3 1071.5349086969102 1071.53380993586 39.382 2 0.08554728636674523 0.0034128768384842495 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122'] 2230 7914 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.43850993586 35.412 2 0.08554351793036186 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 102139 13607 SPREVFFRV True PC9_epitope_Rep2 1135.61382772395 1135.61218490379 57.629 3 0.0855387706511027 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000087088|Q07812-6|BAX', 'nc|ENSG00000087088|Q07812-4|BAX', 'nc|ENSG00000087088|Q07812-7|BAX', 'nc|ENSG00000087088|Q07812-8|BAX', 'ENST00000513545.5_1_19:49458896-49464890:+|nuORF', 'ENSG00000087088|ENST00000345358|BAX', 'nc|ENSG00000087088|Q07812-5|BAX', 'nc|ENSG00000087088|Q07812-2|BAX'] 1110 6217 AEAPPPKIP True H1975_Epitope_Rep3 918.51746772762 918.51636993586 28.926 2 0.08553580029915321 0.0034128768384842495 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 6946 15378 AQLQDFVRA True PC9_epitope_Rep5 1046.55089311422 1046.5497899358602 64.16 2 0.08553154095027939 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 6762 10170 AQEPGNYEV True PC9_epitope_Rep2 1005.4403396057298 1005.43924993586 44.456 2 0.08551695940479834 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 84277 12525 QEYFGSLAA True H1975_Epitope_Rep3 984.4552613938797 984.45471496793 53.374 1 0.08551488272284465 0.0034128768384842495 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 6480 6540 APTGDLPRA True PC9_epitope_Rep2 896.4715801643599 896.47048993586 30.57 2 0.08549263253817578 0.0034128768384842495 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 29612 18491 FVLGHFILL True H1975_Epitope_Rep3 1057.63243791021 1057.63134993586 77.537 2 0.0854925954452867 0.0034128768384842495 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 87677 10490 QVDEDALTY True H1975_Epitope_Rep2 1052.4662200004 1052.46567496793 45.368 1 0.08548622270077713 0.0034128768384842495 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'GBE1-ZNF385D|1|fusion'] 136372 10636 YHDIAQQAF True PC9_epitope_Rep6 1091.50360856863 1091.5025099358602 51.727 2 0.0854842852005556 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 83796 7052 QEELQQLR True PC9_epitope_Rep3 1042.5407223533398 1042.5396299358601 32.136 2 0.08548068007963507 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 89794 13785 RFEEAHFTF True PC9_epitope_Rep6 1182.5458077337796 1182.54415490379 64.824 3 0.08547432157459021 0.0034128768384842495 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 2605 13853 AESLQLVTV True H1975_Epitope_Rep2 958.53351171458 958.53240993586 58.431 2 0.08545621331084963 0.0034128768384842495 0.9438714419765777 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000461999.1_1_11:118967710-118968007:-|nuORF'] 4017 4552 AHISGATSV True PC9_epitope_Rep1 841.4293809992101 841.42828993586 22.388 2 0.0854452189276476 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 140704 19495 YYQEYPMSI True PC9_epitope_Rep4 1192.5110620178398 1192.51047496793 83.105 1 0.08544315220899912 0.0034128768384842495 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000488743.6_1_2:27425876-27434347:-|nuORF'] 76861 21738 NVIESFTEL True PC9_epitope_Rep2 1050.5233409537 1050.52277496793 89.093 1 0.08542752452778335 0.0034128768384842495 0.9438714419765777 ['RAB40A|p.I163V|1|0.09|ENSG00000172476|chrX:103500270-103500270|T/C|missense_variant', 'ENST00000561781.1_1_16:675886-677619:+|nuORF', 'nc|ENSG00000197562|Q96S21-2|RAB40C', 'ENSG00000197562|ENST00000248139|RAB40C'] 9420 21542 AVVPGLLEV True PC9_epitope_Rep2 895.5378688190299 895.53676993586 88.328 2 0.08542107146119499 0.0034128768384842495 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 75477 14123 NQIKEFIYA True PC9_epitope_Rep6 1124.5866099165999 1124.58550993586 66.194 2 0.08541707207606877 0.0034128768384842495 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 36584 8830 GVLGPIINK True NCI_RA007_Epitope_Rep3 909.56475227321 909.56364993586 41.824 2 0.08540810867388564 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000523568.1_7:102228019-102246337:-|nuORF'] 96462 8008 SEITDTVAA True H1975_Epitope_Rep1 905.43419159613 905.43364496793 35.748 1 0.08540559387225846 0.0034128768384842495 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 88989 3289 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 17.372 2 0.08539913818024215 0.0034128768384842495 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 31910 7082 GEQSVVTAP True H1975_Epitope_Rep2 886.4396113297399 886.43850993586 32.172 2 0.08539828577860058 0.0034128768384842495 0.9438714419765777 ['ENSG00000100324|ENST00000216160|TAB1'] 104204 5763 SSDKGRLCYY True H1975_Epitope_Rep2 1190.53900810118 1190.53735490379 27.162 3 0.08538984015315952 0.0034128768384842495 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 15352 18450 EALFQPSFL True H1975_Epitope_Rep1 1050.53859709502 1050.53750993586 76.91 2 0.08538557013013974 0.0034128768384842495 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 11785 6329 DHINGRVL True PC9_epitope_Rep5 922.49846361854 922.49736993586 29.32 2 0.08538281302635399 0.0034128768384842495 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 80631 18319 PLPLPPPPP True PC9_epitope_Rep5 923.5480395799099 923.54694993586 75.478 2 0.08535428064403967 0.0034363331349098977 0.9438714419765777 ['SHROOM3|p.P1528L|1|0.34|ENSG00000138771|chr4:76755066-76755066|C/T|missense_variant', 'ENST00000217964.11_1_X:9433148-9621615:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'MAMLD1|p.P359L|1|0.23|ENSG00000013619|chrX:150470649-150470649|C/T|missense_variant'] 73278 5298 NEIKDSVVA True H1975_Epitope_Rep2 973.5080252427299 973.5074749679301 25.434 1 0.08535318001083815 0.0034363331349098977 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 17416 7010 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.53465490379 31.931 3 0.08535063089980542 0.0034363331349098977 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 83686 10514 QEALSALTA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 45.462 1 0.08534210025358119 0.0034363331349098977 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 11845 9905 DHMVSPTAV True PC9_epitope_Rep1 955.44331681119 955.44220993586 42.957 2 0.08534000287406153 0.0034363331349098977 0.9438714419765777 ['ENST00000440593.3_1_19:13255325-13260573:-|nuORF', 'ENSG00000104915|ENST00000587230|STX10'] 52320 10749 KPANVFITA True PC9_epitope_Rep4 959.54401682863 959.54290993586 49.104 2 0.0853274799338431 0.0034363331349098977 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 6680 8790 AQAPDLQRV True PC9_epitope_Rep5 996.5352430500799 996.53414993586 38.753 2 0.08532141062330607 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 41111 17152 HYMPPPYASL True PC9_epitope_Rep5 1174.5481162328997 1174.5470099358602 70.997 2 0.0853182503786905 0.0034363331349098977 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 4024 12892 AHLDATTVL True PC9_epitope_Rep2 939.5025459394701 939.50144993586 54.886 2 0.0853154443365843 0.0034363331349098977 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000411980.1_1_2:98823421-98823919:+|nuORF'] 27997 18819 FQVQGVQNL True PC9_epitope_Rep2 1031.5399940773498 1031.5388899358602 77.758 2 0.08528933060484727 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 88037 14710 QVTNEFQTV True PC9_epitope_Rep3 1064.51383889916 1064.51274993586 61.722 2 0.08527999167196824 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 1682 9784 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 42.621 1 0.08527811988527284 0.0034363331349098977 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 97653 6489 SHDAAGAAVL True PC9_epitope_Rep2 910.45084471978 910.44974993586 30.374 2 0.08527300557146586 0.0034363331349098977 0.9438714419765777 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENST00000496023.1_1_7:4798670-4799378:+|nuORF'] 63280 4777 LPASETPKA True PC9_epitope_Rep3 912.4916469025999 912.49054993586 23.471 2 0.08526985549976583 0.0034363331349098977 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1'] 29675 19921 FVNDIFERI True PC9_epitope_Rep4 1151.59750895347 1151.59640993586 84.76 2 0.085268570104527 0.0034363331349098977 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 89450 8545 REQDLPLAEA True H1975_Epitope_Rep2 1140.5775017848798 1140.57640993586 37.824 2 0.08526531869403062 0.0034363331349098977 0.9438714419765777 ['ENSG00000169895|ENST00000380155|SYAP1'] 102980 6783 SQIRETQQL True PC9_epitope_Rep5 1101.5778361380499 1101.5767299358602 31.062 2 0.08526341502865095 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000186283|Q9H497-3|TOR3A', 'ENSG00000186283|ENST00000367627|TOR3A', 'ENST00000472001.1_1_1:179057051-179060848:+|nuORF', 'nc|ENSG00000186283|Q9H497-2|TOR3A', 'ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 60525 23374 LIPEYLNFI True PC9_epitope_Rep2 1120.61684741572 1120.61574993586 95.382 2 0.08525677074987244 0.0034363331349098977 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 26118 11241 FHGAPLTV True PC9_epitope_Rep4 840.4493881678001 840.44828993586 51.013 2 0.08525641003949073 0.0034363331349098977 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 71111 9433 METPSIAA True H1975_Epitope_Rep2 818.3844049527398 818.38385496793 41.251 1 0.08525158040941877 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 112824 10347 TPLYTDNTA True PC9_epitope_Rep5 994.46074069714 994.4596499358599 44.785 2 0.08523286990332749 0.0034363331349098977 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 96540 11995 SELPGAFEA True H1975_Epitope_Rep2 919.4287122928699 919.42760993586 51.22 2 0.0852276325141251 0.0034363331349098977 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 118620 3503 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 18.323 2 0.08522202745395765 0.0034363331349098977 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 29596 22249 FVLDEADEML True PC9_epitope_Rep3 1180.53219138524 1180.53108993586 90.866 2 0.08521979081393564 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENST00000448133.1_1_13:61211649-61211793:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 61536 5991 LLGESAVGK True H1975_Epitope_Rep3 872.4967322830399 872.49562993586 28.057 2 0.08521742423178749 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000144566|P20339-2|RAB5A', 'ENSG00000144566|ENST00000273047|RAB5A', 'ENSG00000108774|ENST00000346213|RAB5C', 'nc|ENSG00000108774|P51148-2|RAB5C', 'ENST00000476544.1_1_3:19992384-19992582:+|nuORF', 'ENST00000550013.1_1_17:40282343-40282577:-|nuORF', 'ENST00000546810.1_1_12:56367874-56383936:+|nuORF', 'nc|ENSG00000111540|P61020-2|RAB5B', 'ENSG00000111540|ENST00000360299|RAB5B'] 136383 12398 YHDISTEL True PC9_epitope_Rep5 976.45017601344 976.44906993586 52.685 2 0.08521366999848298 0.0034363331349098977 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 30187 14035 FYVEHPEV True PC9_epitope_Rep1 1018.4759968384599 1018.47488993586 58.823 2 0.08521280178781988 0.0034363331349098977 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF'] 102409 16190 SPVVPQISA True PC9_epitope_Rep1 896.4967322830399 896.49562993586 67.091 2 0.08520820754479935 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 49415 16817 KILPTLEAV True PC9_epitope_Rep4 982.60628273202 982.60518993586 72.658 2 0.08520468441577221 0.0034363331349098977 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 14847 14121 DYFEEYGK True PC9_epitope_Rep1 1049.4341915961297 1049.4330899358602 59.143 2 0.08520007848256654 0.0034363331349098977 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 93906 14065 RVIGDLDTV True PC9_epitope_Rep5 986.53965972418 986.53856993586 59.115 2 0.08519933320973302 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'ENST00000479659.5_1_1:1561777-1565907:+|nuORF', 'nc|ENSG00000197530|Q96AX9-7|MIB2', 'nc|ENSG00000197530|Q96AX9-9|MIB2', 'ENST00000511502.5_1_1:1550926-1563560:+|nuORF', 'ENST00000507229.5_1_1:1551767-1563881:+|nuORF'] 116144 20691 TVTDSMFAV True PC9_epitope_Rep1 969.4477334852899 969.4471849679301 84.412 1 0.08519662924806058 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 27826 19527 FQIPPNAEL True PC9_epitope_Rep4 1027.53384606775 1027.53274993586 83.231 2 0.08518870057946201 0.0034363331349098977 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4', 'ENST00000597277.1_9:43426178-43426727:-|nuORF'] 86519 13433 QRALLANAL True PC9_epitope_Rep2 968.5767139392399 968.57560993586 56.952 2 0.08517735156614965 0.0034363331349098977 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 54605 11923 LADELINAA True H1975_Epitope_Rep2 928.48656152216 928.48546993586 50.942 2 0.0851747076649416 0.0034363331349098977 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000599232.1_1_19:58905872-58905992:+|nuORF'] 120453 19435 VFTYVGALF True NCI_RA007_Epitope_Rep5 1015.5378688190298 1015.53676993586 81.644 2 0.08517113083050754 0.0034363331349098977 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 92311 10162 RQLPAMTAL True NCI_RA007_Epitope_Rep4 999.5535359665099 999.55242993586 45.945 2 0.08516685830699045 0.0034363331349098977 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 110076 11239 TIAEGFVKA True PC9_epitope_Rep4 934.5123823471798 934.51128993586 51.005 2 0.08516237485843495 0.0034363331349098977 0.9438714419765777 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 103296 17560 SQTSATFQL True PC9_epitope_Rep1 981.4767251144499 981.4761749679301 72.336 1 0.08516168363620379 0.0034363331349098977 0.9438714419765777 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 101349 16361 SMAPGLTSV True PC9_epitope_Rep5 861.4266041178901 861.42550993586 67.93 2 0.08515070011907366 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000198682|O95340|PAPSS2', 'ENSG00000198682|ENST00000456849|PAPSS2'] 84727 9427 QHGDVVSAI True PC9_epitope_Rep1 924.46649478392 924.46538993586 41.119 2 0.08514204083893702 0.003450971933892319 0.9438714419765777 ['ENSG00000109062|ENST00000262613|NHERF1', 'nc|ENSG00000109062|O14745-2|NHERF1'] 72238 15749 MRYVASYL True PC9_epitope_Rep2 1001.5004377644898 1001.49934993586 65.847 2 0.08513929480379148 0.003450971933892319 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 24657 12886 FASTILHL True H1975_Epitope_Rep2 900.5069030439199 900.50580993586 54.679 2 0.08513927111881776 0.003450971933892319 0.9438714419765777 ['ENSG00000129562|ENST00000250498|DAD1'] 76890 16892 NVKEMWTEV True PC9_epitope_Rep5 1134.53794547202 1134.5368499358601 69.987 2 0.08513770974954402 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 47482 18129 IYKFITERF True PC9_epitope_Rep5 1215.6651945904698 1215.66355490379 74.742 3 0.08513636567632543 0.003450971933892319 0.9438714419765777 ['ENSG00000178919|ENST00000375123|FOXE1'] 97800 12695 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.4914349679301 54.137 1 0.08512966622590272 0.003450971933892319 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 110370 22811 TILPAIILV True PC9_epitope_Rep4 951.63685458431 951.63574993586 95.964 2 0.0851286118613078 0.003450971933892319 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 101635 16871 SPFGTITSA True PC9_epitope_Rep5 879.43379767331 879.43270993586 69.905 2 0.08511394950582783 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 123471 19160 VIFTKFDEV True PC9_epitope_Rep5 1096.580461907 1096.57936993586 78.736 2 0.08511336175893634 0.003450971933892319 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'CLASP1|p.N240Ifs*72|1|0.18|ENSG00000074054|chr2:121469954-121469954|T/-|frameshift_variant', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 42636 5370 IETNHNLPP True H1975_Epitope_Rep2 1033.5192586327698 1033.5181699358602 25.696 2 0.08510887427655722 0.003450971933892319 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 3241 5143 AGFAGDDAPR True PC9_epitope_Rep2 975.4410083120698 975.43990993586 25.161 2 0.08510814452573948 0.003450971933892319 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 31501 6066 GEEQPPQPP True H1975_Epitope_Rep2 977.4454249861699 977.44432993586 28.31 2 0.08510577639333419 0.003450971933892319 0.9438714419765777 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 84563 16840 QHDFQAPYL True PC9_epitope_Rep1 1117.5192586327698 1117.5181699358602 69.6 2 0.08509887971232909 0.003450971933892319 0.9438714419765777 ['ENST00000481464.5_1_1:19927449-19952892:+|nuORF', 'ENST00000486890.5_1_1:19927449-19950128:+|nuORF', 'ENSG00000173436|ENST00000322753|MICOS10', 'ENST00000498642.5_1_1:19923539-19952083:+|nuORF'] 20015 5053 EM[Oxidation]PPTNPIR True H1975_Epitope_Rep3 1069.5226301414898 1069.5215299358601 24.559 2 0.08509496221707524 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 87422 14773 QTEDNMLFY True H1975_Epitope_Rep3 1159.4855755459898 1159.48446993586 62.203 2 0.08509035243110696 0.003450971933892319 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 6655 14990 AQAEVYKELRL True PC9_epitope_Rep1 1318.7245003717399 1318.72285490379 62.478 3 0.08508935794041358 0.003450971933892319 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 103019 20872 SQIYPVVCV True PC9_epitope_Rep5 1006.5157534754599 1006.51464993586 85.337 2 0.08508901187433583 0.003450971933892319 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 102016 4953 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 23.349 2 0.0850836010917677 0.003450971933892319 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 23798 12060 EYLDDRNTF True PC9_epitope_Rep6 1171.51456717515 1171.51346993586 57.701 2 0.08508299645511527 0.003450971933892319 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53', 'TP53|p.H214R|4|0.56|ENSG00000141510|chr17:7674890-7674890|T/C|missense_variant', 'TP53|p.R213G|1|0.52|ENSG00000141510|chr17:7674894-7674894|G/C|missense_variant', 'TP53|p.R213L|1|0.15|ENSG00000141510|chr17:7674893-7674893|C/A|missense_variant'] 69061 10225 LVIITAGAR True PC9_epitope_Rep6 912.5756513100799 912.57454993586 49.983 2 0.08507764634536516 0.003450971933892319 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 104591 4643 SSSSVLINK True NCI_RA007_Epitope_Rep4 933.51311062317 933.51200993586 24.276 2 0.08507737565512646 0.003450971933892319 0.9438714419765777 ['ENSG00000120278|ENST00000696526|PLEKHG1'] 45054 20028 IQPDNIVYV True PC9_epitope_Rep5 1059.56006081559 1059.5589699358602 82.089 2 0.08507637767745845 0.003450971933892319 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 132897 18081 VYTSVVEEL True PC9_epitope_Rep6 1037.5280919809697 1037.52698993586 82.184 2 0.08506714487623714 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 70364 13648 LYQDGVFKF True NCI_RA007_Epitope_Rep5 1115.56514619603 1115.56404993586 59.18 2 0.0850599268719398 0.003450971933892319 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 139919 12947 YVFPGVTRL True H1975_Epitope_Rep1 1050.58621599378 1050.58567496793 54.875 1 0.08505744047821767 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 96930 2640 SETVMVHQA True NCI_RA007_Epitope_Rep5 1000.4647805317599 1000.46368993586 14.842 2 0.085053442474306 0.003450971933892319 0.9438714419765777 ['ENSG00000100647|ENST00000342745|SUSD6'] 46189 7467 ITDHLDTQY True H1975_Epitope_Rep2 1104.5087535187201 1104.5076499358602 33.669 2 0.08504910844351916 0.003450971933892319 0.9438714419765777 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 18743 8619 ELDPDNETY True H1975_Epitope_Rep1 1094.44039917538 1094.4398749679299 38.08 1 0.08504339290291832 0.003450971933892319 0.9438714419765777 ['ENSG00000104969|ENST00000221566|SGTA'] 110144 21617 TIDDGIFEV True PC9_epitope_Rep2 1007.48114178855 1007.48057496793 88.624 1 0.0850385898900219 0.003450971933892319 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 91576 5607 RPAPQIQEA True PC9_epitope_Rep5 1008.53524305008 1008.53414993586 26.571 2 0.0850302459110225 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000197696|P08949-2|NMB'] 96000 9137 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39686496793 40.097 1 0.0850295538844326 0.003450971933892319 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 132507 5792 VYPERSTSY True PC9_epitope_Rep4 1100.51383889916 1100.51274993586 29.133 2 0.08501891666833157 0.003450971933892319 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 70333 17806 LYPQFMFHL True NCI_RA007_Epitope_Rep1 1194.5895871220598 1194.58848993586 73.398 2 0.08501712564468 0.003450971933892319 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 75714 18742 NQVSTIVSL True PC9_epitope_Rep4 959.52876068731 959.52766993586 80.175 2 0.08501418356113302 0.003450971933892319 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HECTD1|p.L328Ffs*29|1|0.3|ENSG00000092148|chr14:31173328-31173329|-/AA|frameshift_variant'] 90548 9835 RKFLETVEL True NCI_RA007_Epitope_Rep3 1133.6444591458899 1133.64280490379 45.759 3 0.08500978614691951 0.003450971933892319 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 107535 11190 TADHNLLLY True H1975_Epitope_Rep2 1058.53965972418 1058.53907496793 48.082 1 0.08500518685566794 0.003450971933892319 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 74827 19139 NLPIFLPRV True PC9_epitope_Rep6 1067.64915060351 1067.6480499358602 86.269 2 0.08499089323214432 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 112746 7372 TPKMPGQSV True PC9_epitope_Rep5 943.47970231991 943.47860993586 33.313 2 0.08498391234450856 0.003450971933892319 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000420969.1_1_2:162357792-162360000:-|nuORF'] 132498 6891 VYPERSTSY True PC9_epitope_Rep1 1100.51383889916 1100.51274993586 31.31 2 0.0849785137301068 0.003450971933892319 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 108800 8828 TEQEVYAQVA True H1975_Epitope_Rep2 1136.5349682665599 1136.5338699358601 38.923 2 0.0849622552587572 0.003450971933892319 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'ENST00000394947.7_1_15:75702535-75702580:-|nuORF'] 83878 12716 QEIATVVVP True H1975_Epitope_Rep3 954.5385970950199 954.5380449679301 54.122 1 0.08496083261537753 0.003450971933892319 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 94942 9633 RYPDSHQLF True PC9_epitope_Rep6 1161.55670677065 1161.5550749037902 47.397 3 0.08494727366778689 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 26376 14827 FIHQHFVEV True PC9_epitope_Rep5 1154.5872786229402 1154.5856249037902 62.032 3 0.08493886004629292 0.003450971933892319 0.9438714419765777 ['KLHL18|p.S161R|1|0.62|ENSG00000114648|chr3:47330032-47330032|C/A|missense_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 18054 13728 EIIRQLNGV True PC9_epitope_Rep5 1040.59784330664 1040.59674993586 57.831 2 0.08493055268013563 0.003450971933892319 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 36460 23416 GVISGLFEL True PC9_epitope_Rep1 933.5171333744499 933.51658496793 94.854 1 0.08492674647754128 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 117824 13124 VANRYFTTV True PC9_epitope_Rep5 1069.55564414149 1069.5545499358602 55.486 2 0.08492350027141571 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1', 'ENST00000467707.1_1_9:128116999-128121864:+|nuORF', 'ENST00000474637.5_1_9:128108952-128125022:+|nuORF'] 131253 10226 VVQDGITLITK True NCI_RA007_Epitope_Rep4 1185.69688864157 1185.6957899358601 46.189 2 0.08491997644574513 0.003450971933892319 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 132774 15441 VYSQFITQL True NCI_RA007_Epitope_Rep4 1097.5757108797297 1097.57460993586 67.062 2 0.08491870171493557 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 103370 12959 SQVPEVTTV True PC9_epitope_Rep4 958.49712620586 958.49602993586 57.739 2 0.08490143640651217 0.003450971933892319 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 136149 6267 YGGPVGAGIR True H1975_Epitope_Rep3 945.5032146458099 945.50210993586 29.114 2 0.08489560767272684 0.003450971933892319 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7'] 96889 6857 SETEATPVP True H1975_Epitope_Rep3 929.4341915961298 929.43364496793 31.333 1 0.0848764101024945 0.003450971933892319 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 130737 10753 VVDPNDPQM True PC9_epitope_Rep1 1013.44879611445 1013.44768993586 46.249 2 0.08486329664381681 0.003450971933892319 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 1136 6926 AEAPPSVAP True H1975_Epitope_Rep2 837.4232329896099 837.42212993586 31.562 2 0.08485753428749467 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 39533 19045 HPFGFVAV True PC9_epitope_Rep3 872.4544735482399 872.45336993586 78.477 2 0.08485522820333202 0.003450971933892319 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 47271 23092 IYEPNFIFF True PC9_epitope_Rep4 1188.5855472874398 1188.5849749679298 97.045 1 0.08484742519958674 0.003450971933892319 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 57017 10489 LEEELGRDWQA True H1975_Epitope_Rep3 1344.6309939097198 1344.62988993586 45.409 2 0.0848441075361777 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000123815|Q96D53-2|COQ8B', 'ENSG00000123815|ENST00000324464|COQ8B'] 2087 7494 AELLSRTV True H1975_Epitope_Rep3 887.50763131991 887.50652993586 33.808 2 0.0848243339998547 0.003450971933892319 0.9438714419765777 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589085.5_1_19:5787014-5789688:-|nuORF'] 887 5913 ADLSGITK True NCI_RA007_Epitope_Rep2 803.43888305375 803.43778993586 27.617 2 0.08482083697762388 0.003450971933892319 0.9438714419765777 ['CON__P34955', 'ENSG00000100665|ENST00000557004|SERPINA4'] 7457 12237 ASDM[Oxidation]LQLEY True H1975_Epitope_Rep3 1084.4746768895598 1084.47356993586 52.244 2 0.08481939132107387 0.003450971933892319 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 132441 14809 VYNPVRAEW True PC9_epitope_Rep4 1132.5665431783598 1132.5654499358602 64.901 2 0.0848175976035197 0.003450971933892319 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6'] 97051 6230 SEYIHAQVA True H1975_Epitope_Rep2 1016.4927095317598 1016.49160993586 28.925 2 0.08481223572149953 0.003450971933892319 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 37544 21325 GYMEGYYTF True PC9_epitope_Rep5 1129.44264810485 1129.44207496793 87.083 1 0.08480277580815267 0.003450971933892319 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 89100 4564 REFDNPDTA True NCI_RA007_Epitope_Rep3 1063.45705229903 1063.4559499358602 24.832 2 0.08480230527087028 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000136161|O95199-2|RCBTB2', 'ENSG00000136161|ENST00000344532|RCBTB2'] 102601 22141 SQAPFIVAL True PC9_epitope_Rep1 944.5331177917599 944.53202993586 89.978 2 0.08480103147815703 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 99087 15737 SLADLQNDEV True PC9_epitope_Rep6 1102.5142328219802 1102.5131299358602 72.758 2 0.08479955210202385 0.003450971933892319 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF'] 26040 18797 FHDHALMIIF True PC9_epitope_Rep6 1242.6219498795 1242.62029490379 84.943 3 0.08479652598332559 0.003450971933892319 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 102154 15187 SPRPPLISV True PC9_epitope_Rep3 964.57056592964 964.56946993586 63.562 2 0.08479498690118561 0.003450971933892319 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1', 'nc|ENSG00000053770|Q9H0R1-2|AP5M1', 'ENST00000554931.1_1_14:57736032-57741739:+|nuORF'] 60522 23544 LIPEYLNFI True PC9_epitope_Rep1 1120.61684741572 1120.61574993586 95.353 2 0.08477492657572841 0.003450971933892319 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 75959 5255 NRGESTVL True PC9_epitope_Rep3 874.45084471978 874.44974993586 25.292 2 0.08477490372924966 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 91551 20190 RPAGALVALVV True PC9_epitope_Rep5 1064.67061432408 1064.66950993586 82.707 2 0.08477385941237513 0.003450971933892319 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 8229 18884 ATIGELAQV True PC9_epitope_Rep3 900.4916469025999 900.49054993586 77.86 2 0.0847687256919983 0.003450971933892319 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 89111 4500 REFEERHIP True H1975_Epitope_Rep3 1211.6047195922297 1211.60308490379 22.429 3 0.08476627125112812 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 67820 22640 LTIEDGIFEV True PC9_epitope_Rep2 1134.58085582982 1134.5802749679299 92.579 1 0.08474177069201835 0.003450971933892319 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 1425 7600 AEEGPPLGA True H1975_Epitope_Rep3 839.4024975450299 839.40194496793 34.214 1 0.08474106165654759 0.003450971933892319 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 113702 11727 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 49.982 2 0.08473777942333434 0.003450971933892319 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 43416 18392 IHSEPLGVVL True PC9_epitope_Rep5 1062.60734536118 1062.6062499358602 75.763 2 0.08473654026298799 0.003450971933892319 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 98046 18656 SHTLVSLSL True PC9_epitope_Rep5 955.5338460677501 955.53274993586 76.785 2 0.0847209798293243 0.003450971933892319 0.9438714419765777 ['ENSG00000160445|ENST00000291900|ZER1'] 86525 12149 QRALLANAL True PC9_epitope_Rep6 968.5767139392399 968.57560993586 58.084 2 0.08471965130106729 0.003450971933892319 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 44852 18568 IPYHIVNIV True PC9_epitope_Rep4 1066.6175161220601 1066.61697496793 79.499 1 0.08470161759456075 0.003450971933892319 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 35509 9921 GTGIVSAPVPK True PC9_epitope_Rep5 1024.59169529704 1024.5905899358602 43.134 2 0.08470058276982381 0.003450971933892319 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 132395 18561 VYNENLVHMI True PC9_epitope_Rep2 1230.60669373818 1230.60558993586 76.747 2 0.08469449860094219 0.003450971933892319 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 39539 18930 HPFGFVAV True PC9_epitope_Rep5 872.4544735482399 872.45336993586 77.837 2 0.08468503559440509 0.003450971933892319 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 8005 7330 ATDPTIHTV True PC9_epitope_Rep5 953.4818104948899 953.48070993586 33.154 2 0.08468154800213205 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 96114 9884 SEDSPPPLP True H1975_Epitope_Rep2 937.4392769765699 937.43872496793 43.007 1 0.08467896394597617 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12'] 98360 16924 [Acetylation]-SIHFSSPVF True H1975_Epitope_Rep1 1061.51819631991 1061.51767496793 70.51 1 0.08466608713555379 0.003450971933892319 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 33214 12850 GLADASLLKKV True PC9_epitope_Rep6 1113.6757592741699 1113.67466993586 60.94 2 0.08465745513290426 0.003450971933892319 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10'] 118633 4856 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 23.766 2 0.08464433747687783 0.003450971933892319 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 84081 6665 QEQEGGPAVP True H1975_Epitope_Rep3 1010.4668887067396 1010.46578993586 30.591 2 0.08463151338824497 0.003450971933892319 0.9438714419765777 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 106069 19091 SVLVSVSEV True PC9_epitope_Rep2 917.50696261357 917.50586993586 78.801 2 0.08463104470668154 0.003450971933892319 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 137636 22615 YLVYILNEL True PC9_epitope_Rep4 1138.6274120994199 1138.62630993586 95.219 2 0.08462468340252623 0.003450971933892319 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 46421 20057 ITLDGGAIYEA True PC9_epitope_Rep5 1121.5604547384098 1121.5593499358602 82.203 2 0.08462364851474578 0.003450971933892319 0.9438714419765777 ['ENSG00000163975|ENST00000296350|MELTF', 'nc|ENSG00000163975|P08582-2|MELTF', 'ENST00000473501.1_1_3:196753297-196754890:-|nuORF'] 38984 13119 HKDAYQVIL True PC9_epitope_Rep1 1085.5869442697701 1085.58584993586 55.33 2 0.08461789809059884 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'ENST00000530300.1_1_11:43333659-43340360:+|nuORF'] 127322 19031 VQNDTLLQV True PC9_epitope_Rep3 1028.5502244078798 1028.54912993586 78.423 2 0.08461631064990907 0.003450971933892319 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 35241 5856 GSIDAITGK True NCI_RA007_Epitope_Rep5 860.46034677432 860.45924993586 29.21 2 0.08460870817919161 0.003450971933892319 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 68691 14068 LVDDNYFY True H1975_Epitope_Rep3 1047.45492704071 1047.4543749679299 59.436 1 0.0845893703530825 0.003450971933892319 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 97038 12109 SEWLIRPP True NCI_RA007_Epitope_Rep3 996.5392658013599 996.53816993586 54.746 2 0.08458718748297472 0.003450971933892319 0.9438714419765777 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 7962 16903 ATDLAYYLV True H1975_Epitope_Rep3 1027.52261267771 1027.52207496793 70.577 1 0.0845821500882074 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL', 'ASL|p.R379L|1|0.21|ENSG00000126522|chr7:66092079-66092079|G/T|missense_variant'] 117166 9211 TYSTEPNNL True PC9_epitope_Rep6 1037.46655435357 1037.46544993586 45.569 2 0.08458134317739771 0.003450971933892319 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 23641 18441 EYGIFNQKI True PC9_epitope_Rep1 1110.57095985246 1110.5698699358602 75.724 2 0.08457173788346453 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 138480 12384 YRGNVGVVL True PC9_epitope_Rep2 975.5501648382299 975.54906993586 52.944 2 0.08456876153729675 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT', 'ENSG00000128951|ENST00000331200|DUT'] 73835 7329 NHDYSYTV True PC9_epitope_Rep6 997.4141248578901 997.41302993586 37.363 2 0.08456699070999879 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant'] 102348 5768 SPVFTSRSAA True PC9_epitope_Rep2 1021.51925863277 1021.51816993586 27.579 2 0.08456097364783777 0.003450971933892319 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 52661 6654 KQFEKQVEL True PC9_epitope_Rep4 1147.6237237013097 1147.62208490379 32.766 3 0.08452266461488421 0.003450971933892319 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 21569 5915 ERSEPTQAL True PC9_epitope_Rep5 1029.5090878718897 1029.50798993586 27.745 2 0.08451267753283043 0.003450971933892319 0.9438714419765777 ['ENST00000587807.5_1_18:54270260-54293401:-|nuORF', 'ENSG00000091164|ENST00000217515|TXNL1'] 54324 10518 KYQDAPAAQF True PC9_epitope_Rep5 1137.5454733806098 1137.54436993586 45.445 2 0.0845099173392029 0.003450971933892319 0.9438714419765777 ['KEAP1|p.N469Kfs*11|1|0.54|ENSG00000079999|chr19:10489772-10489773|-/T|frameshift_variant', 'KEAP1|p.R596Efs*2|1|0.17|ENSG00000079999|chr19:10486741-10486741|G/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.C319Afs*9|1|0.35|ENSG00000079999|chr19:10491948-10491948|G/-|frameshift_variant'] 138066 5293 YQDTHPERL True PC9_epitope_Rep3 1157.5465360097699 1157.54488490379 25.437 3 0.08449794269670123 0.003450971933892319 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 89800 9813 RFEEKHAYF True PC9_epitope_Rep3 1225.5880068989297 1225.58635490379 42.702 3 0.08447574947380639 0.003450971933892319 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 88612 14685 RALTVPEL True PC9_epitope_Rep4 897.5283667644899 897.52726993586 64.42 2 0.08443854022287776 0.003450971933892319 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 39488 7198 HPADSVVSV True PC9_epitope_Rep4 909.4555957470501 909.45448993586 34.99 2 0.08441989571320185 0.003450971933892319 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 85976 8751 QPFPAHIGRSA True PC9_epitope_Rep5 1179.61489035311 1179.61324490379 38.602 3 0.08441941071659026 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000139436|Q14161-3|GIT2', 'ENSG00000139436|ENST00000355312|GIT2', 'nc|ENSG00000139436|Q14161-4|GIT2'] 132635 11354 VYQGHTALL True PC9_epitope_Rep5 1000.5341804209199 1000.53308993586 48.669 2 0.08441291843941931 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 12033 12604 DIDIRPGLY True H1975_Epitope_Rep3 1060.5553097883198 1060.5542099358602 53.686 2 0.08440540342204883 0.003450971933892319 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B', 'ENST00000484312.1_1_3:179298984-179304429:+|nuORF'] 108318 6810 TEDLKTLSA True H1975_Epitope_Rep2 976.50769088956 976.50658993586 31.112 2 0.08440355859223984 0.003450971933892319 0.9438714419765777 ['ENSG00000121957|ENST00000264126|GPSM2', 'GPSM1|p.G58S|2|0.32|ENSG00000160360|chr9:136334550-136334550|G/A|missense_variant', 'nc|ENSG00000160360|Q86YR5-4|GPSM1', 'nc|ENSG00000160360|Q86YR5|GPSM1', 'ENSG00000160360|ENST00000440944|GPSM1', 'nc|ENSG00000160360|Q86YR5-3|GPSM1'] 106691 15922 SYANVQDGF True PC9_epitope_Rep5 999.4297749220299 999.42927496793 66.235 1 0.08439608335638428 0.003450971933892319 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 73963 17558 NHM[Oxidation]AVAFVL True PC9_epitope_Rep5 1016.5113371818 1016.51022993586 72.545 2 0.08438723870977352 0.003450971933892319 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 130451 17484 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 72.43 2 0.08437738999128937 0.003450971933892319 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 106076 17243 SVLVSVSEV True PC9_epitope_Rep6 917.50696261357 917.50586993586 78.923 2 0.08436236312551067 0.003450971933892319 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 117023 16130 TYQDIQNTI True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 67.034 2 0.08435370357587302 0.003450971933892319 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 108914 7253 TESSQSFVA True H1975_Epitope_Rep2 954.4294405688598 954.4288949679301 32.833 1 0.08434876322229579 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2'] 78197 8093 PAPPPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 38.58 2 0.08434840551218373 0.003450971933892319 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 89456 14924 REQEIPFVFA True H1975_Epitope_Rep2 1234.6346227381798 1234.63352993586 62.558 2 0.08434686267987339 0.003450971933892319 0.9438714419765777 ['SECISBP2L|p.A823Qfs*12|1|0.13|ENSG00000138593|chr15:48996524-48996524|A/-|frameshift_variant', 'ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L'] 110107 9659 TIAPALVSK True PC9_epitope_Rep1 898.5487678559 898.54766993586 42.009 2 0.08434106626413418 0.003450971933892319 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 24288 20310 FAAPLILL True H1975_Epitope_Rep2 856.54222592348 856.54167496793 84.165 1 0.08433022991562235 0.003450971933892319 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 70758 5136 MEDANVRVA True H1975_Epitope_Rep2 1003.4756795686299 1003.47458993586 24.833 2 0.08432473054998083 0.003450971933892319 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 122826 8409 VGVNGFGR True PC9_epitope_Rep5 804.4242360491198 804.42312993586 37.286 2 0.08432113416045824 0.003450971933892319 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 124173 18244 VLADALKSI True PC9_epitope_Rep1 928.5593325396001 928.55822993586 74.966 2 0.0843185780907469 0.003450971933892319 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000573554.1_1_16:18800267-18800435:-|nuORF'] 134850 11206 YAAAETYL True H1975_Epitope_Rep2 900.4228986364399 900.42235496793 48.144 1 0.08431845005397559 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000105643|Q8TBH0-2|ARRDC2'] 43728 5368 IISSIEQK True NCI_RA007_Epitope_Rep1 916.5229470308799 916.52184993586 24.959 2 0.08431092627433838 0.003450971933892319 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 91548 20227 RPAGALVALVV True PC9_epitope_Rep3 1064.67061432408 1064.66950993586 83.063 2 0.08429810557648079 0.003450971933892319 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 33199 18982 GLAAGGIVAV True PC9_epitope_Rep2 826.4912529797799 826.49014993586 78.379 2 0.08429371026136948 0.003450971933892319 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 57288 7246 LEGGQTPIA True H1975_Epitope_Rep3 884.4603467743199 884.4597949679301 32.844 1 0.08429223665800373 0.003450971933892319 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 48499 7895 KEFIKIVEA True NCI_RA007_Epitope_Rep5 1075.62774645259 1075.62664993586 37.06 2 0.08429218387527185 0.003450971933892319 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 106881 19294 SYIEHIFEI True PC9_epitope_Rep6 1149.57062549929 1149.57007496793 86.861 1 0.08427186229333944 0.0034725961020781737 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 135829 7497 YEQGPDTPVSA True H1975_Epitope_Rep2 1162.51423282198 1162.5131299358602 33.787 2 0.08426803077385202 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 70481 20978 LYSPLAEQF True PC9_epitope_Rep2 1066.5335117145798 1066.5324099358602 86.143 2 0.08426528977877175 0.0034725961020781737 0.9438714419765777 ['ENSG00000103148|ENST00000611875|NPRL3'] 129068 20369 VTAPSGILDV True PC9_epitope_Rep3 970.53351171458 970.53240993586 83.599 2 0.08426357208600099 0.0034725961020781737 0.9438714419765777 ['ENSG00000162063|ENST00000397066|CCNF'] 44923 8140 IQEAVYKNV True PC9_epitope_Rep4 1062.57095985246 1062.5698699358602 38.765 2 0.08425562313329686 0.0034725961020781737 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 95221 10438 SAAQPLNL True H1975_Epitope_Rep2 812.43921740692 812.4386649679301 45.165 1 0.08424964334984406 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 23773 13389 EYISTVKTL True PC9_epitope_Rep5 1052.57537652656 1052.57426993586 56.517 2 0.08423070898528669 0.0034725961020781737 0.9438714419765777 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 70412 22844 LYQILQGIVF True PC9_epitope_Rep4 1192.6855956818797 1192.68448993586 96.091 2 0.08422953202598729 0.0034725961020781737 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 120283 16594 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 68.834 2 0.08422641999022118 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 97461 9997 SGHLETVILG True H1975_Epitope_Rep1 1024.5553097883198 1024.5542099358602 43.389 2 0.08422464861012008 0.0034725961020781737 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 53221 12095 KTDLLLEPY True H1975_Epitope_Rep3 1090.5910265906998 1090.58992993586 51.688 2 0.08421519686683357 0.0034725961020781737 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 108541 14353 TEGEPPFLP True H1975_Epitope_Rep1 985.4756624852898 985.47511496793 60.401 1 0.08420330409518513 0.0034725961020781737 0.9438714419765777 ['ENSG00000241058|ENST00000377304|NSUN6'] 74800 18942 NLNPEFISV True PC9_epitope_Rep6 1031.5287606873098 1031.52817496793 85.506 1 0.08420300446458963 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 57127 11277 LEEPLTQVA True H1975_Epitope_Rep2 998.52842633414 998.5278749679301 48.423 1 0.08419953082305745 0.0034725961020781737 0.9438714419765777 ['ENSG00000116586|ENST00000368305|LAMTOR2', 'ENST00000368302.3_1_1:156027838-156028159:+|nuORF', 'nc|ENSG00000116586|Q9Y2Q5-3|LAMTOR2'] 107051 15829 SYLPLAHMF True NCI_RA007_Epitope_Rep5 1077.53173789277 1077.53064993586 67.607 2 0.08419748962270031 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 2195 9053 AENISSVVA True H1975_Epitope_Rep2 888.4552613938799 888.45471496793 39.776 1 0.08419744299865349 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C'] 120009 21664 VFCPPMKFEF True PC9_epitope_Rep1 1243.5769738330298 1243.57586993586 88.159 2 0.08419489009910636 0.0034725961020781737 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF'] 137595 15675 YLTDRVMTV True PC9_epitope_Rep2 1096.5586809166 1096.55758993586 65.571 2 0.08418641708110192 0.0034725961020781737 0.9438714419765777 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3'] 88506 10213 RADDTFEAL True NCI_RA007_Epitope_Rep1 1036.48253877088 1036.48197496793 43.737 1 0.08417152532671127 0.0034725961020781737 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 119176 7168 VEKIGEISA True H1975_Epitope_Rep2 944.51786165044 944.51676993586 32.505 2 0.08415891456799802 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7668832-7673976:+|nuORF'] 127462 9575 VQSNRILGV True PC9_epitope_Rep6 984.5716285587998 984.57052993586 47.13 2 0.08415019306773766 0.0034725961020781737 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 26378 13195 FIIDPNGVIK True NCI_RA007_Epitope_Rep1 1114.6386454894598 1114.63754993586 55.324 2 0.08414942285058828 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 86260 21288 QQADVVLVL True PC9_epitope_Rep1 983.5651461960299 983.56404993586 86.71 2 0.08413384801090089 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000130762|Q5VV41-2|ARHGEF16', 'ENSG00000130762|ENST00000378378|ARHGEF16', 'ENST00000485984.1_1_1:3394688-3397148:+|nuORF'] 104009 6586 SRSDSNFQV True PC9_epitope_Rep4 1038.47303671634 1038.47192993586 32.491 2 0.08413369928969544 0.0034725961020781737 0.9438714419765777 ['ENST00000505131.1_1_4:48384636-48389420:+|nuORF', 'ENSG00000109171|ENST00000264313|SLAIN2'] 110090 20367 TIAEIKNLF True PC9_epitope_Rep3 1047.59644632431 1047.5953499358602 83.59 2 0.08412483522205991 0.0034725961020781737 0.9438714419765777 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000601652.5_1_19:14640444-14674077:+|nuORF'] 105911 23868 SVLDLVVAL True PC9_epitope_Rep2 927.56408356687 927.5635349679301 97.281 1 0.08412316504421713 0.0034725961020781737 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12', 'ENST00000479481.5_1_10:99131673-99132940:-|nuORF'] 96444 11453 SEILGVAA True H1975_Epitope_Rep2 758.41741933318 758.4168749679301 49.108 1 0.08412220979087093 0.0034725961020781737 0.9438714419765777 ['ENSG00000123213|ENST00000380985|NLN'] 95262 11228 SADPNVVDL True H1975_Epitope_Rep2 928.45017601344 928.44962496793 48.23 1 0.08411394473761181 0.0034725961020781737 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 14056 10036 DSDHWAPIHY True H1975_Epitope_Rep2 1239.53088594563 1239.5297899358602 43.595 2 0.0840940174092813 0.0034725961020781737 0.9438714419765777 ['ENSG00000001631|ENST00000394505|KRIT1', 'nc|ENSG00000001631|O00522-2|KRIT1', 'ENST00000486261.5_1_7:91830052-91864980:-|nuORF', 'ENST00000475770.5_1_7:91830052-91864980:-|nuORF'] 85507 9173 QLIVGVNK True PC9_epitope_Rep1 869.53345214493 869.53234993586 40.133 2 0.0840919009672365 0.0034725961020781737 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 22097 8610 ESVFTVEGGHR True PC9_epitope_Rep5 1216.58364979448 1216.5820049037902 38.062 3 0.08409005536767271 0.0034725961020781737 0.9438714419765777 ['ENST00000543465.5_1_12:7077022-7079730:-|nuORF', 'nc|ENSG00000215021|Q99623-2|PHB2', 'ENSG00000215021|ENST00000535923|PHB2', 'ENST00000542294.1_1_12:7079357-7079730:-|nuORF', 'ENST00000544134.5_1_12:7077746-7079730:-|nuORF'] 40207 4649 HRGTGIAL True PC9_epitope_Rep4 823.46643521427 823.46532993586 24.403 2 0.08408964250340846 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 133306 9933 WEQDYHLQP True H1975_Epitope_Rep2 1214.5356369729 1214.53452993586 43.197 2 0.0840736483604562 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6'] 31096 17610 GAYSPIVLL True H1975_Epitope_Rep2 931.53786881903 931.5373249679301 73.052 1 0.08407291945326721 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 7090 9998 AQYDRQIRL True PC9_epitope_Rep5 1161.6254550368099 1161.62380490379 43.432 3 0.08407090860130624 0.0034725961020781737 0.9438714419765777 ['ENST00000600753.1_1_19:47634148-47653459:+|nuORF', 'nc|ENSG00000142230|Q9UBE0-2|SAE1', 'nc|ENSG00000142230|Q9UBE0-3|SAE1', 'ENSG00000142230|ENST00000270225|SAE1'] 62247 19444 LLQDFFNGR True PC9_epitope_Rep2 1108.56654317836 1108.5654499358602 80.17 2 0.08406931171450821 0.0034725961020781737 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 47669 24138 IYPPLLGALSF True PC9_epitope_Rep5 1189.6746966450098 1189.67358993586 97.833 2 0.08406183647187812 0.0034725961020781737 0.9438714419765777 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 1962 10583 AEIQGVIDA True H1975_Epitope_Rep3 914.4709114580199 914.4703649679301 45.777 1 0.08403698243780586 0.0034725961020781737 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 31744 5526 GELAIKDANA True NCI_RA007_Epitope_Rep3 1000.5189242795999 1000.51782993586 28.734 2 0.08403383801056179 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__H-INV:HIT000292931'] 87393 19627 QTDPTLLSV True PC9_epitope_Rep5 972.5127762699999 972.51222496793 80.548 1 0.08402565719141905 0.0034725961020781737 0.9438714419765777 ['ENSG00000144867|ENST00000678299|SRPRB'] 86925 8223 QRSDGPYAL True PC9_epitope_Rep4 1005.4879585044899 1005.48686993586 39.09 2 0.08400488795992946 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 2039 13732 AELDSVFSSA True H1975_Epitope_Rep3 1024.47130538084 1024.4707749679299 58.117 1 0.08400376129622437 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000173744|P52594-2|AGFG1', 'ENSG00000173744|ENST00000310078|AGFG1', 'nc|ENSG00000173744|P52594-3|AGFG1', 'nc|ENSG00000173744|P52594-4|AGFG1'] 71356 8399 MHYNRKIIL True PC9_epitope_Rep2 1186.6644833978198 1186.66282490379 37.679 3 0.0840030097542878 0.0034725961020781737 0.9438714419765777 ['ENST00000557431.5_1_14:78177213-78182211:+|nuORF'] 21085 8989 ERDPATYNI True PC9_epitope_Rep4 1077.5090878718902 1077.50798993586 42.131 2 0.08400068822330967 0.0034725961020781737 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 74023 9976 NHSDLDAEL True PC9_epitope_Rep2 1012.44615326216 1012.44504993586 43.702 2 0.08399885356799493 0.0034725961020781737 0.9438714419765777 ['ENSG00000184292|ENST00000371225|TACSTD2'] 96003 9344 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39686496793 40.903 1 0.08398937316282211 0.0034725961020781737 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 2014 7442 AELATRALP True H1975_Epitope_Rep2 940.5341804209199 940.53308993586 33.571 2 0.08398466666286142 0.0034725961020781737 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 35581 17636 GTINNLIHV True PC9_epitope_Rep3 979.5450794577899 979.5439899358599 73.028 2 0.08396740807989288 0.0034725961020781737 0.9438714419765777 ['nc|ENSG00000131791|O43741-2|PRKAB2', 'ENSG00000131791|ENST00000254101|PRKAB2'] 107525 9103 TADGAHFEL True NCI_RA007_Epitope_Rep3 959.43486030247 959.43376993586 42.892 2 0.08396554554524278 0.0034725961020781737 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP', 'ENST00000546538.1_1_19:16643407-16652813:-|nuORF'] 124884 23047 VLLNEILEQV True PC9_epitope_Rep2 1168.67033954056 1168.66924993586 94.142 2 0.08396373474351769 0.0034725961020781737 0.9438714419765777 ['ENSG00000109805|ENST00000251496|NCAPG'] 137491 20960 YLPPGFLSA True PC9_epitope_Rep2 963.50656869075 963.50546993586 86.07 2 0.08395471875461698 0.0034725961020781737 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 4133 14866 AHTPVIISV True PC9_epitope_Rep5 935.54401682863 935.54290993586 62.185 2 0.0839538164877205 0.0034725961020781737 0.9438714419765777 ['ENSG00000182993|ENST00000330828|C12orf60'] 87777 11931 QVHGTITGVDV True PC9_epitope_Rep1 1124.5825871653199 1124.5814899358602 50.757 2 0.08395347529644558 0.0034725961020781737 0.9438714419765777 ['ENSG00000167088|ENST00000300413|SNRPD1'] 125992 10492 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.49088993586 45.297 2 0.08394378211009922 0.0034725961020781737 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 47702 15871 IYPVKYTQTF True PC9_epitope_Rep2 1258.65977485686 1258.6586699358602 66.305 2 0.08394015670389306 0.0034725961020781737 0.9438714419765777 ['ENSG00000112378|ENST00000421351|PERP'] 98019 7264 SHSSVILKM True PC9_epitope_Rep4 1000.5375515492 1000.53644993586 35.252 2 0.08393579360000815 0.0034725961020781737 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 97079 7879 SEYMNNKEALP True H1975_Epitope_Rep2 1294.58635221642 1294.58524993586 35.253 2 0.0839259358386788 0.0034725961020781737 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK', 'ENST00000515592.1_1_5:140041093-140041799:+|nuORF'] 34931 19054 GQWIAETGV True PC9_epitope_Rep3 959.4712458111899 959.47014993586 78.513 2 0.0839187175968358 0.003484413948377067 0.9438714419765777 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 140575 19611 YYLSKIEEL True PC9_epitope_Rep3 1156.6015912743999 1156.6004899358602 80.67 2 0.08391583797355431 0.003484413948377067 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5'] 44202 16114 ILSEVQQAV True PC9_epitope_Rep5 985.54441075145 985.54330993586 66.972 2 0.08391535460545729 0.003484413948377067 0.9438714419765777 ['ENSG00000143799|ENST00000366794|PARP1', 'ENST00000490921.5_1_1:226555150-226558263:-|nuORF'] 15208 11208 EAFNMIDQNR True PC9_epitope_Rep6 1236.5557207944798 1236.55462993586 54.09 2 0.08388912368487879 0.003484413948377067 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 42242 3967 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 20.387 2 0.0838889694491515 0.003484413948377067 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 140803 15182 YYSPHGHILVL True PC9_epitope_Rep2 1297.68190728377 1297.68025490379 63.656 3 0.08388777664083481 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 136348 8905 YHDDDNSVL True PC9_epitope_Rep3 1076.44106788172 1076.43996993586 39.204 2 0.08388363728531584 0.003484413948377067 0.9438714419765777 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 102476 7997 SPYIPPHAA True PC9_epitope_Rep2 951.48141657207 951.48030993586 36.122 2 0.0838756204025134 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 103248 17649 SQSSVVYEI True PC9_epitope_Rep1 1010.4920408254198 1010.49147496793 72.68 1 0.08387163926748366 0.003484413948377067 0.9438714419765777 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 132824 11246 VYTGIDHHW True PC9_epitope_Rep5 1126.51959298594 1126.51848993586 48.249 2 0.08387153323211759 0.003484413948377067 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766226-105766550:+|nuORF'] 2286 6559 AEPSRGPPLP True H1975_Epitope_Rep1 1019.5399940773498 1019.53888993586 30.286 2 0.08387056825606849 0.003484413948377067 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 77400 17484 NYLSTMKNF True PC9_epitope_Rep5 1116.52738078832 1116.5262899358602 72.254 2 0.0838643765626595 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 140607 11579 YYMIGEQKF True NCI_RA007_Epitope_Rep4 1177.5477818797299 1177.54668993586 51.486 2 0.08386340047792605 0.003484413948377067 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT'] 88192 15682 QYAIISEAW True NCI_RA007_Epitope_Rep3 1079.52876068731 1079.52766993586 69.32 2 0.08386259560020132 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'ENSG00000165475|ENST00000298248|CRYL1'] 138689 15676 YRTEFTTAL True PC9_epitope_Rep5 1100.55022440788 1100.54912993586 65.309 2 0.08386037543921603 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 54614 16726 LADIVTELY True H1975_Epitope_Rep2 1035.54882742555 1035.5477299358602 69.573 2 0.08385873262135218 0.003484413948377067 0.9438714419765777 ['ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'UBE2E2-FAM179B|1|fusion'] 65070 17093 LSDLGLLSY True H1975_Epitope_Rep2 979.52261267771 979.5220649679301 71.022 1 0.08385195090147586 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 107388 12756 SYSSTFHSL True PC9_epitope_Rep1 1027.46107505031 1027.45996993586 53.94 2 0.08385120810677699 0.003484413948377067 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 23843 23125 EYLPIGGLAEF True PC9_epitope_Rep5 1207.6124903112698 1207.6119749679299 93.937 1 0.0838475384429295 0.003484413948377067 0.9438714419765777 ['CNOT1-GOT2|1|fusion', 'ENST00000568368.1_1_16:58756047-58768190:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2'] 13929 17067 DRFFSEYEKL True PC9_epitope_Rep4 1332.6350166609998 1332.6339099358602 73.647 2 0.08384673307905961 0.003484413948377067 0.9438714419765777 ['ENSG00000135932|ENST00000258418|CAB39'] 116924 14711 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47054993586 61.585 2 0.08384220446013384 0.003484413948377067 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 21989 15792 ESMLNTVLY True H1975_Epitope_Rep2 1068.51614739828 1068.5150499358601 65.928 2 0.08383557509860175 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'ENST00000525616.1_1_19:50180537-50188241:+|nuORF'] 17212 13980 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 61.679 2 0.0838263577496175 0.003484413948377067 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 32672 12865 GHNAIINTL True PC9_epitope_Rep5 951.5137793295102 951.51268993586 54.494 2 0.0838111246089315 0.003484413948377067 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 2101 6439 AELPASVHA True H1975_Epitope_Rep2 893.4606811274899 893.45958993586 29.687 2 0.08380877930936526 0.003484413948377067 0.9438714419765777 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 113218 18551 TQDSSILPL True PC9_epitope_Rep6 972.5127762699999 972.51166993586 83.995 2 0.08380808809504792 0.003484413948377067 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 12030 5949 DIDIHEVR True NCI_RA007_Epitope_Rep3 995.5036085686299 995.50250993586 30.382 2 0.0838080194365295 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 44989 17062 IQINVGTTV True PC9_epitope_Rep4 943.53384606775 943.53274993586 73.626 2 0.08380622194337249 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 12285 8997 DISLSDYK True H1975_Epitope_Rep3 939.45492704071 939.45382993586 39.603 2 0.0838045740782459 0.003484413948377067 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 1471 11571 AEELSTALP True H1975_Epitope_Rep2 929.4705771048499 929.47002496793 49.572 1 0.08380410680396302 0.003484413948377067 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2', 'GTF3C2|p.A731Cfs*26|1|0.4|ENSG00000115207|chr2:27328533-27328534|-/A|frameshift_variant', 'GTF3C2|p.H458Tfs*71|1|0.41|ENSG00000115207|chr2:27336012-27336012|G/-|frameshift_variant', 'nc|ENSG00000115207|Q8WUA4-2|GTF3C2'] 19964 14881 EMDSPILGDY True H1975_Epitope_Rep2 1138.4852411928198 1138.48467496793 62.393 1 0.08380389777000136 0.003484413948377067 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 54480 8181 LAAARLAAA True PC9_epitope_Rep5 826.5024863698198 826.50138993586 36.408 2 0.08380180512834626 0.003484413948377067 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 49275 2678 KHGGPKDEER True NCI_RA007_Epitope_Rep2 1151.5683340835099 1151.56669490379 14.637 3 0.08379225226882799 0.003484413948377067 0.9438714419765777 ['ENSG00000142168|ENST00000270142|SOD1'] 102119 7375 SPQQPGLSA True PC9_epitope_Rep2 883.4399456829099 883.43884993586 33.749 2 0.08379043483552506 0.003484413948377067 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 125978 10511 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.49088993586 45.32 2 0.08378927107358483 0.003484413948377067 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 6312 5572 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 26.51 2 0.0837847177167958 0.003484413948377067 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 106647 18638 SYADAFQFL True NCI_RA007_Epitope_Rep4 1060.4865615221602 1060.48546993586 80.621 2 0.08377149930452595 0.003484413948377067 0.9438714419765777 ['ENSG00000242732|ENST00000609883|RTL5'] 75580 19609 NQPGVLIQV True PC9_epitope_Rep5 966.5498304850599 966.54928496793 80.478 1 0.08376218756357047 0.003484413948377067 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 45238 17175 IRPENVIIY True PC9_epitope_Rep1 1115.6338944621898 1115.63278993586 70.885 2 0.08374578539537537 0.003484413948377067 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 128328 14041 VSDITDPLQY True H1975_Epitope_Rep2 1149.55536935797 1149.55426993586 59.16 2 0.08373136284627293 0.003484413948377067 0.9438714419765777 ['ENSG00000182405|ENST00000397766|PGBD4'] 1808 11388 AEIDASNIV True H1975_Epitope_Rep3 930.46582607758 930.4652749679301 48.918 1 0.08373111690038662 0.003484413948377067 0.9438714419765777 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 14098 10412 DSDSEGPIQY True H1975_Epitope_Rep2 1109.4512982122499 1109.4502099358601 45.064 2 0.08373086248625086 0.003484413948377067 0.9438714419765777 ['ENST00000493669.2_1_1:28733953-28817463:+|nuORF', 'nc|ENSG00000204138|Q8IZ21-3|PHACTR4', 'ENSG00000204138|ENST00000373839|PHACTR4', 'nc|ENSG00000204138|Q8IZ21-2|PHACTR4'] 40728 13059 HTVEDLVKV True PC9_epitope_Rep1 1038.5709598524597 1038.5698699358602 55.098 2 0.08372449156081498 0.003484413948377067 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 132318 18129 VYLPNINKI True PC9_epitope_Rep2 1072.62808080576 1072.6269899358601 75.035 2 0.08371247829400533 0.003484413948377067 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 96915 6703 SETKIFTA True NCI_RA007_Epitope_Rep5 895.4650978015899 895.46400993586 32.455 2 0.0837091661858317 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 106512 11094 SVVPDVRSV True PC9_epitope_Rep6 956.52909504048 956.52798993586 53.599 2 0.0837071452880728 0.003484413948377067 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 108966 7712 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 34.619 2 0.08370689879547394 0.003484413948377067 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 106975 11425 SYLENVDHF True NCI_RA007_Epitope_Rep4 1122.49818883502 1122.49708993586 50.868 2 0.08370299354086877 0.003484413948377067 0.9438714419765777 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-5|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'ENST00000576872.1_1_17:4872867-4875829:-|nuORF'] 120677 13323 VGAPKIPSV True PC9_epitope_Rep3 866.5225531080599 866.52144993586 56.28 2 0.08370181054710175 0.003484413948377067 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 104333 13334 SSEQTFMYY True H1975_Epitope_Rep2 1154.4590264449798 1154.4579299358602 56.421 2 0.08370002413765779 0.003484413948377067 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 101658 20988 SPFQFTVGP True PC9_epitope_Rep2 978.4810822188999 978.47998993586 86.181 2 0.08369820066236547 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 24338 8749 FADLSEAANR True PC9_epitope_Rep6 1092.5199869087598 1092.5188899358602 43.543 2 0.08369725662716455 0.003484413948377067 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 75846 11777 NRDLATPVM True PC9_epitope_Rep3 1015.51206507735 1015.51096993586 50.318 2 0.0836919760020358 0.003484413948377067 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 91094 21560 RLLSFVVLA True PC9_epitope_Rep5 1016.63825156664 1016.63714993586 87.969 2 0.08369112098664597 0.003484413948377067 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF', 'chr1:156020167-156020337|162|12.83|0.31|5.36|-|0|SSR2,None|1'] 32002 13232 GETIFVTAP True NCI_RA007_Epitope_Rep5 933.48074786573 933.4801949679301 57.576 1 0.08368057273942531 0.003484413948377067 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 105086 20914 STLDGVLEV True PC9_epitope_Rep1 931.48622716899 931.4856749679301 85.266 1 0.0836805240136006 0.003484413948377067 0.9438714419765777 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6'] 95088 7813 RYSSM[Oxidation]AASF True PC9_epitope_Rep5 1034.44913084806 1034.4480299358602 34.997 2 0.08367435550127761 0.003484413948377067 0.9438714419765777 ['ENSG00000162366|ENST00000294338|PDZK1IP1'] 132304 11632 VYLPGSRQTL True PC9_epitope_Rep6 1132.62405805448 1132.62296993586 55.865 2 0.0836506939782114 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 104149 5706 SSAGPGLLK True NCI_RA007_Epitope_Rep4 828.4705175352 828.46942993586 28.563 2 0.0836484911379553 0.003484413948377067 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 89049 9814 REEFPTLQA True H1975_Epitope_Rep2 1089.5454733806098 1089.54436993586 42.733 2 0.08364816305717979 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 116899 14763 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47107496793 61.605 1 0.0836431463225999 0.003484413948377067 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 105898 23353 SVLDGLLYV True PC9_epitope_Rep2 977.54334812229 977.54224993586 95.301 2 0.08364079733583195 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 34863 7820 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42828993586 39.473 2 0.08363748208932015 0.003484413948377067 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 3490 9565 AGLQFPVGR True NCI_RA007_Epitope_Rep3 943.5239500903898 943.52284993586 44.709 2 0.08363684007986037 0.003484413948377067 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 97810 13042 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.4914349679301 55.445 1 0.08363215122211345 0.003484413948377067 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 137339 20568 YLKDFFSNV True PC9_epitope_Rep5 1131.56006081559 1131.5589699358602 84.161 2 0.08363097764236654 0.003484413948377067 0.9438714419765777 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 40831 16295 HVLDVIHEV True PC9_epitope_Rep3 1059.57129420563 1059.57018993586 67.815 2 0.08363084440434475 0.003484413948377067 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 84906 9042 QHSTAQLNL True PC9_epitope_Rep1 1010.5145076055 1010.51340993586 39.632 2 0.0836279391911707 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 133512 18820 WHDSDWIL True PC9_epitope_Rep6 1070.48214484806 1070.48104993586 85.033 2 0.08362752457307715 0.003484413948377067 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50'] 17202 14845 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50708496793 62.365 1 0.0836153344877756 0.003484413948377067 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 137579 15351 YLSQDTVSV True PC9_epitope_Rep1 1010.49204082542 1010.49094993586 63.865 2 0.08361195061933338 0.003484413948377067 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 2224 7962 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.4390649679301 35.574 1 0.08360701843201995 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 31805 12450 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43606993586 52.979 2 0.08360611984211468 0.003484413948377067 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 88968 3152 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 16.602 2 0.0836033532917459 0.003484413948377067 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 52106 19703 KLPSETIFVGC True PC9_epitope_Rep5 1192.61619579272 1192.6150899358602 80.835 2 0.0836032593725326 0.003484413948377067 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 4087 11644 AHSNLASVL True PC9_epitope_Rep2 910.4872302285 910.48612993586 50.115 2 0.08359413989444803 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 6529 11742 APVAEVPTA True PC9_epitope_Rep5 853.4545331178899 853.45342993586 50.166 2 0.08359220502443528 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 95428 19312 SALDTITTV True PC9_epitope_Rep3 919.48622716899 919.48512993586 79.506 2 0.08358711583176398 0.003484413948377067 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 26036 19875 FHDHALMIIF True PC9_epitope_Rep4 1242.6219498795 1242.62029490379 84.581 3 0.08358568146097399 0.003484413948377067 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 2478 4270 AEQPSQPSSTP True H1975_Epitope_Rep2 1127.5094817947102 1127.5083899358601 21.537 2 0.08357600522761255 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 14028 4727 DSAPSPPPP True H1975_Epitope_Rep3 863.40249754503 863.40194496793 23.309 1 0.08357101390720773 0.003484413948377067 0.9438714419765777 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 75785 14319 NRAPQLLIA True PC9_epitope_Rep5 994.5923640033799 994.5912699358599 60.08 2 0.0835596089754656 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 103705 13972 SRDYAVVL True PC9_epitope_Rep5 921.4919812557699 921.49088993586 58.766 2 0.08355300123597108 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 131773 14369 VYAEVSRLLL True NCI_RA007_Epitope_Rep4 1161.6757592741699 1161.67466993586 62.578 2 0.0835467499309913 0.003484413948377067 0.9438714419765777 ['ENSG00000114999|ENST00000233336|TTL'] 52486 8423 KPLQPLPNTA True PC9_epitope_Rep2 1077.61824439805 1077.6171499358602 37.769 2 0.08354475269548113 0.003484413948377067 0.9438714419765777 ['ENST00000498414.5_1_6:30314081-30314584:+|nuORF', 'ENST00000473266.1_1_6:30313175-30314584:+|nuORF', 'ENSG00000241370|ENST00000442966|RPP21', 'nc|ENSG00000241370|Q9H633-4|RPP21', 'nc|ENSG00000241370|Q9H633-2|RPP21', 'ENST00000436442.2_2_6:30314274-30314587:+|nuORF'] 34664 23241 GQLDFSEFL True PC9_epitope_Rep3 1054.49712620586 1054.4960299358602 94.671 2 0.08353897107597039 0.003484413948377067 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 121424 12805 VGIDIFTGK True NCI_RA007_Epitope_Rep1 948.52803241132 948.52692993586 53.796 2 0.08352674793969296 0.003484413948377067 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 127093 14791 VQAPRLAAL True PC9_epitope_Rep1 937.5709002828098 937.56980993586 61.713 2 0.0835226416786562 0.003484413948377067 0.9438714419765777 ['ENSG00000033100|ENST00000035307|CHPF2', 'nc|ENSG00000033100|Q9P2E5-2|CHPF2', 'CHPF2|p.Y186N|1|0.45|ENSG00000033100|chr7:151235340-151235340|T/A|missense_variant'] 132512 15347 VYPERTPLL True PC9_epitope_Rep3 1086.60734536118 1086.6062499358602 64.188 2 0.08352131550558596 0.003484413948377067 0.9438714419765777 ['ENST00000475235.1_1_6:32782088-32784728:-|nuORF', 'ENSG00000241106|ENST00000438763|HLA-DOB'] 2712 8671 AETLAPVQA True H1975_Epitope_Rep3 898.47599683846 898.47544496793 38.351 1 0.08351441904800214 0.003484413948377067 0.9438714419765777 ['ENSG00000018408|ENST00000360632|WWTR1', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 115201 6569 TVAVGVIK True NCI_RA007_Epitope_Rep1 785.50108938749 785.49998993586 29.566 2 0.08351350284333087 0.003484413948377067 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 130680 14451 VVDEIFNEY True H1975_Epitope_Rep1 1126.51825557326 1126.51714993586 60.783 2 0.08350637735280027 0.003484413948377067 0.9438714419765777 ['ENSG00000100220|ENST00000216038|RTCB'] 54374 16782 KYQIINEEF True PC9_epitope_Rep2 1182.5920892198599 1182.59098993586 69.8 2 0.08349568794400762 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 106205 5909 SVPLPISHK True NCI_RA007_Epitope_Rep4 976.5705659296401 976.56946993586 29.352 2 0.08349238632602507 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF', 'ENST00000480104.5_1_X:47101567-47101732:+|nuORF'] 89539 3562 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5876299358601 19.719 2 0.0834904751291451 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 9811 13083 AYLHTTTTF True PC9_epitope_Rep5 1053.51311062317 1053.51257496793 55.33 1 0.08348831411806945 0.003484413948377067 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 39743 18918 HPYLFPVA True PC9_epitope_Rep1 942.4963383602199 942.49524993586 77.553 2 0.08347659127321781 0.003484413948377067 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 106510 12953 SVVPDVRSV True PC9_epitope_Rep5 956.52909504048 956.52798993586 54.833 2 0.08347362034730653 0.003484413948377067 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 135192 8660 YAVEGRDL True PC9_epitope_Rep6 921.4555957470499 921.45448993586 43.146 2 0.08346603284599892 0.003484413948377067 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000368311.5_1_1:155984733-155990735:-|nuORF', 'ENST00000532074.5_1_1:155984857-155990687:-|nuORF', 'ENST00000484320.6_1_1:155988041-155990687:-|nuORF'] 70906 5302 [Acetylation]-M[Oxidation]EKTELIQK True NCI_RA007_Epitope_Rep5 1176.6060257285797 1176.6049299358601 27.088 2 0.08346380612455195 0.003484413948377067 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ'] 135176 7624 YASSPGGVY True H1975_Epitope_Rep2 899.40249754503 899.40194496793 34.279 1 0.08345885659430319 0.003484413948377067 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 75543 8106 NQLIRTSGV True PC9_epitope_Rep4 986.55089311422 986.54978993586 38.633 2 0.08345781705652697 0.003484413948377067 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 91792 8761 RPLLKAITA True PC9_epitope_Rep2 981.63350053937 981.63240993586 39.055 2 0.08345614106740695 0.003484413948377067 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 72241 17071 MRYVASYL True PC9_epitope_Rep5 1001.5004377644898 1001.49934993586 70.683 2 0.08345253205880152 0.003484413948377067 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 27790 21842 FQEGDIILV True PC9_epitope_Rep5 1032.5491617787197 1032.5480699358602 89.049 2 0.08345219888893522 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 16822 19713 EFNSTPAVF True PC9_epitope_Rep2 1010.4709114580198 1010.4703749679301 81.213 1 0.08344891443105003 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 20891 7454 EQSPTRCTL True PC9_epitope_Rep1 1033.48624425233 1033.4851499358601 33.489 2 0.08343550868597169 0.003484413948377067 0.9438714419765777 ['ENSG00000265808|ENST00000578049|SEC22B'] 127068 18546 VPYPPLLRA True PC9_epitope_Rep5 1024.6069514383598 1024.60584993586 76.36 2 0.08342151306410031 0.003484413948377067 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 107752 8835 TAMDAQEAL True NCI_RA007_Epitope_Rep3 948.4222470134399 948.42114993586 41.845 2 0.08342049510881666 0.003484413948377067 0.9438714419765777 ['ENST00000433877.6_1_12:122990076-123005058:-|nuORF', 'nc|ENSG00000111011|Q7L4I2-2|RSRC2', 'ENSG00000111011|ENST00000331738|RSRC2'] 52729 12357 KQLDENISL True PC9_epitope_Rep4 1058.56078909158 1058.5596899358602 55.337 2 0.08341320003679707 0.003484413948377067 0.9438714419765777 ['ENSG00000119285|ENST00000366582|HEATR1'] 71933 11332 MPSSVPLRA True PC9_epitope_Rep3 956.5113368013599 956.51022993586 48.594 2 0.08340879438657933 0.003484413948377067 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 1318 5860 AEEAARLSVA True H1975_Epitope_Rep2 1015.5298233164699 1015.52872993586 27.526 2 0.08338498943385524 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 39064 10224 HKVLPLEAL True NCI_RA007_Epitope_Rep4 1018.6175161220599 1018.61640993586 46.182 2 0.08337351809858827 0.003484413948377067 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1', 'GCN1L1-CCND2|1|fusion'] 135882 11478 YESEWTNEV True H1975_Epitope_Rep1 1155.47203365683 1155.47092993586 49.134 2 0.0833481150815034 0.003484413948377067 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF', 'EXT2|p.K581N|1|0.19|ENSG00000151348|chr11:44232433-44232433|G/T|missense_variant'] 76839 9142 NVHAVFQEA True PC9_epitope_Rep2 1013.4930438849299 1013.49194993586 40.505 2 0.08333760695602561 0.003484413948377067 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 71091 6478 METAAAVAA True NCI_RA007_Epitope_Rep5 833.3953039896098 833.39475496793 31.585 1 0.08333299185456067 0.003484413948377067 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 41100 17594 HYMPPPYASL True PC9_epitope_Rep1 1174.5481162328997 1174.5470099358602 72.468 2 0.08333236753039033 0.003484413948377067 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 75516 3965 NQKDPGVLDR True NCI_RA007_Epitope_Rep1 1140.58873517492 1140.5870849037901 19.464 3 0.08332103377227601 0.003484413948377067 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 126716 8882 VPRQPTVTSV True PC9_epitope_Rep3 1082.60840799034 1082.60730993586 39.114 2 0.08331586826334955 0.003484413948377067 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5'] 41103 17291 HYMPPPYASL True PC9_epitope_Rep3 1174.5481162328997 1174.5470099358602 71.684 2 0.08330958269818278 0.003484413948377067 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 34707 18578 GQMGSFIRL True PC9_epitope_Rep2 1007.5222358382299 1007.52112993586 76.814 2 0.08328976256726847 0.003484413948377067 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 88252 12203 QYESKVFYL True NCI_RA007_Epitope_Rep5 1175.5862755634298 1175.5851699358602 53.591 2 0.08328911536866966 0.003484413948377067 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 134064 21281 WQLLLPTAL True NCI_RA007_Epitope_Rep1 1053.62226714933 1053.62116993586 87.07 2 0.08328671161735975 0.003484413948377067 0.9438714419765777 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENSG00000162747|ENST00000650385|FCGR3B'] 95463 10295 SALSDLHA True PC9_epitope_Rep2 812.4028318982001 812.40172993586 44.929 2 0.08328421228287317 0.003484413948377067 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF'] 29710 17779 FVPEIFHRI True PC9_epitope_Rep2 1156.6393141958 1156.63765490379 73.675 3 0.083282206213084 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 74809 22164 NLPDEEIFQQL True PC9_epitope_Rep2 1344.6561460284 1344.65504993586 90.741 2 0.083280974236325 0.003484413948377067 0.9438714419765777 ['ENSG00000169019|ENST00000381571|COMMD8'] 132903 14674 VYTTTVHW True PC9_epitope_Rep5 1005.49198125577 1005.49088993586 61.447 2 0.0832784145428064 0.003484413948377067 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 46720 4268 IVAGTLTNK True NCI_RA007_Epitope_Rep3 915.53893144819 915.53782993586 23.486 2 0.08327321741147815 0.003484413948377067 0.9438714419765777 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 138939 14085 YSEGESLFY True H1975_Epitope_Rep2 1093.46040634397 1093.4593099358601 59.332 2 0.08326097773414046 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 44505 11947 IPAAIATA True PC9_epitope_Rep2 726.4275900940601 726.4270449679301 51.276 1 0.08325963632251465 0.003484413948377067 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 17631 15168 EHNSILQSL True PC9_epitope_Rep4 1039.52982331647 1039.5287299358602 66.27 2 0.08325744216492663 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 7130 10891 AQYEHDLEV True PC9_epitope_Rep2 1102.4931034545798 1102.49200993586 47.209 2 0.08325515011739441 0.003484413948377067 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 34596 13285 GQGQIYVHL True PC9_epitope_Rep4 1013.5294293936499 1013.52832993586 58.996 2 0.08325504273401772 0.003484413948377067 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 39569 15964 HPIEPVLITA True PC9_epitope_Rep2 1088.62299542532 1088.62188993586 66.659 2 0.08325376595509361 0.003484413948377067 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 42585 7045 IESRTLAIA True NCI_RA007_Epitope_Rep3 972.5603951687599 972.55928993586 34.83 2 0.08324743322996137 0.003484413948377067 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 128348 10500 VSDNGPCLGY True H1975_Epitope_Rep2 1023.4331460503099 1023.4320499358599 45.406 2 0.08324533448483923 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 84899 16163 QHSITPLAL True PC9_epitope_Rep5 978.5498304850599 978.54872993586 67.16 2 0.0832442852644091 0.003484413948377067 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 74086 11127 NHVASDISL True PC9_epitope_Rep5 954.47705946762 954.47596993586 47.791 2 0.08323723469986961 0.003484413948377067 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L'] 48002 7821 KAINQGGLTSV True PC9_epitope_Rep4 1086.6033226099 1086.6022299358601 37.488 2 0.08322348867306219 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000100902|P60900-2|PSMA6', 'ENSG00000100902|ENST00000261479|PSMA6', 'ENST00000556167.1_1_14:35761682-35777333:+|nuORF', 'ENST00000554843.5_1_14:35761682-35780127:+|nuORF'] 21760 10205 ESDDGVVVY True H1975_Epitope_Rep3 981.4291062156899 981.42855496793 44.299 1 0.0832032530376091 0.003484413948377067 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 70103 13551 LYITEPKTI True PC9_epitope_Rep6 1076.61176203528 1076.6106699358602 63.855 2 0.0832025688130474 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 87572 19993 QTPEFFQDV True PC9_epitope_Rep4 1109.5029398622898 1109.50184993586 85.036 2 0.08319995889241268 0.003484413948377067 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 54189 8212 KYPDRVPVI True NCI_RA007_Epitope_Rep5 1085.62332977849 1085.62222993586 38.268 2 0.08319683028944494 0.003484413948377067 0.9438714419765777 ['ENSG00000139112|ENST00000266458|GABARAPL1', 'ENSG00000170296|ENST00000302386|GABARAP', 'nc|ENSG00000139112|Q9H0R8-2|GABARAPL1', 'ENSG00000034713|ENST00000037243|GABARAPL2'] 88246 16732 QYEQVKQLF True PC9_epitope_Rep1 1181.6080736371698 1181.6069699358602 69.187 2 0.08319613971334827 0.003484413948377067 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1', 'CNOT1-GOT2|1|fusion'] 117847 10233 VAPEEHPVLL True NCI_RA007_Epitope_Rep2 1102.60225998074 1102.60116993586 44.395 2 0.0831928538037597 0.003484413948377067 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 84599 6036 QHDPSAVAV True PC9_epitope_Rep1 922.4508447197799 922.44974993586 28.031 2 0.08318333708441052 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 29263 17934 FVDGSAIQV True PC9_epitope_Rep2 934.47599683846 934.47488993586 74.289 2 0.0831829144425659 0.003484413948377067 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 108402 8022 TEEAPIQATP True H1975_Epitope_Rep2 1055.51350454599 1055.5124099358602 35.804 2 0.08317619469723594 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'nc|ENSG00000185567|Q8IVF2-2|AHNAK2'] 76177 10450 NRSNTVVIM True PC9_epitope_Rep5 1032.53861417836 1032.53750993586 45.182 2 0.08317533502154732 0.003484413948377067 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 26957 21819 FLITILDHL True PC9_epitope_Rep4 1083.63283183303 1083.6317299358602 92.122 2 0.08317380264203665 0.003484413948377067 0.9438714419765777 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2', 'nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1'] 35256 6762 GSLFLRTPK True NCI_RA007_Epitope_Rep5 1017.5971150306499 1017.59600993586 32.686 2 0.08316968091463836 0.003484413948377067 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000437325.2_1_1:235901419-235901638:+|nuORF'] 73219 6849 NEGVATYAA True H1975_Epitope_Rep2 894.4083112014598 894.40776496793 31.263 1 0.08316753295015764 0.003484413948377067 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 126498 13640 VPNKFLVTA True PC9_epitope_Rep1 987.5753169569099 987.57420993586 57.322 2 0.08316742581744739 0.003484413948377067 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 105940 14788 SVLEPPLFLK True NCI_RA007_Epitope_Rep4 1141.6746966450098 1141.67358993586 64.343 2 0.08315688040130341 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 6659 17630 AQAGALLQV True PC9_epitope_Rep2 869.49706663621 869.49596993586 73.096 2 0.08315418608281734 0.003484413948377067 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 9535 20926 AYAENIALL True PC9_epitope_Rep5 976.5229470308799 976.52184993586 85.549 2 0.08315377130369005 0.003484413948377067 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 117162 10942 TYSTEPNNL True PC9_epitope_Rep3 1037.46655435357 1037.46544993586 47.071 2 0.08315150866026705 0.003484413948377067 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 130754 12059 VVDPNQVNV True PC9_epitope_Rep2 982.5083595959001 982.50726993586 51.699 2 0.08314580084697153 0.003484413948377067 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 114193 9956 TRTSSVVTL True PC9_epitope_Rep3 962.53965972418 962.53856993586 43.251 2 0.08313656238670715 0.003484413948377067 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 84611 5888 QHDPSAVAV True PC9_epitope_Rep3 922.4508447197799 922.44974993586 27.712 2 0.08313508876808653 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 76950 20932 NVPEGLLATV True PC9_epitope_Rep2 1011.56006081559 1011.55896993586 85.963 2 0.08312613012305389 0.003484413948377067 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 73742 8645 NHANGLTL True PC9_epitope_Rep3 838.4297153523801 838.42860993586 38.203 2 0.0831059691310188 0.003507644522987121 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 41027 7635 HYGQSGISM True PC9_epitope_Rep4 978.4229157197799 978.42180993586 36.748 2 0.08310365918915004 0.003507644522987121 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57490357-57492756:-|nuORF'] 128367 13454 VSDPVGVLY True H1975_Epitope_Rep1 947.49639792987 947.4958449679301 56.867 1 0.08310088192217698 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 2551 6181 AERGDWVQA True NCI_RA007_Epitope_Rep3 1030.4832074772198 1030.48210993586 31.32 2 0.08308575283263259 0.003507644522987121 0.9438714419765777 ['ENST00000524001.1_1_8:21768344-21770030:-|nuORF', 'ENSG00000147443|ENST00000276420|DOK2'] 11863 11812 DHNGMLSV True PC9_epitope_Rep5 871.38580193507 871.38470993586 50.431 2 0.0830732582906916 0.003507644522987121 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 87001 14851 QRYPGQVIL True PC9_epitope_Rep1 1072.6029286870798 1072.60182993586 61.943 2 0.08307209246274201 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 6076 13728 APMPPIIHA True PC9_epitope_Rep4 945.51060852537 945.50950993586 60.702 2 0.08305166310162045 0.003507644522987121 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 120584 11754 VGAGAPVYL True H1975_Epitope_Rep1 845.46470387877 845.4641549679301 50.206 1 0.08304847620840261 0.003507644522987121 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 2665 7072 AETAAVTVAA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 32.131 1 0.08304299665428459 0.003507644522987121 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 9810 12961 AYLHTTTTF True PC9_epitope_Rep5 1053.51311062317 1053.51200993586 54.863 2 0.08303580600389524 0.003507644522987121 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 92437 4880 RQVASHVGL True NCI_RA007_Epitope_Rep2 965.5406627836898 965.53956993586 23.605 2 0.08303532048627264 0.003507644522987121 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 33291 14222 GLATDVQTV True PC9_epitope_Rep3 902.47091145802 902.46980993586 59.79 2 0.0830334197865837 0.003507644522987121 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 35117 8312 GRSDTQLVV True PC9_epitope_Rep2 973.5192586327698 973.51816993586 37.337 2 0.08302621788765371 0.003507644522987121 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 114348 12925 TSDELQFGY True H1975_Epitope_Rep1 1058.4556553167 1058.45507496793 54.79 1 0.08301503231579249 0.003507644522987121 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 57443 8923 LEIPPPKPP True H1975_Epitope_Rep1 986.5800679841799 986.57896993586 39.227 2 0.08301004825240219 0.003507644522987121 0.9438714419765777 ['ENSG00000143614|ENST00000368655|GATAD2B', 'nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 59817 11313 LHDINAQL True PC9_epitope_Rep5 922.4872302285 922.48612993586 48.508 2 0.08300793713127508 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 105313 4129 STTTGHLIYK True NCI_RA007_Epitope_Rep5 1119.5924235730301 1119.5913299358601 22.377 2 0.0830000017299128 0.003507644522987121 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2'] 9034 18517 AVIGDVIRV True PC9_epitope_Rep5 940.57056592964 940.56946993586 76.25 2 0.08299106082354392 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 83672 9150 QEAISVVA True H1975_Epitope_Rep3 815.4388830537499 815.43833496793 40.185 1 0.08298862088199901 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B'] 70840 4434 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 22.166 2 0.08298129267868926 0.003507644522987121 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 46227 4917 ITDQNSDGY True H1975_Epitope_Rep1 1011.4145187807098 1011.41342993586 23.988 2 0.08297772529451028 0.003507644522987121 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 135635 7403 YEERVQAVV True H1975_Epitope_Rep3 1091.56112344475 1091.56002993586 33.454 2 0.0829754857977706 0.003507644522987121 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 115620 22682 TVISILNTI True PC9_epitope_Rep1 972.58554728744 972.58444993586 92.05 2 0.0829718067588609 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 118140 11057 VAVEPGAAV True PC9_epitope_Rep2 811.4439684341899 811.44286993586 47.849 2 0.08296596039648342 0.003507644522987121 0.9438714419765777 ['ENSG00000171421|ENST00000505059|MRPL36'] 23810 13812 EYLERAPEL True PC9_epitope_Rep4 1118.5607890915799 1118.5596899358602 61.023 2 0.08296059380860336 0.003507644522987121 0.9438714419765777 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 8297 12388 ATLGGPAIVHA True PC9_epitope_Rep1 1005.56072952193 1005.55962993586 52.51 2 0.08291176625198866 0.003507644522987121 0.9438714419765777 ['ENSG00000123983|ENST00000357430|ACSL3'] 52041 7945 KLHDVELHQV True PC9_epitope_Rep5 1216.65642081192 1216.65478490379 35.499 3 0.08290794376466361 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000560075.1_1_15:52439654-52476873:-|nuORF'] 39986 4296 HQRITEEL True NCI_RA007_Epitope_Rep3 1024.53015766964 1024.5290699358602 23.631 2 0.08290700224960096 0.003507644522987121 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 8920 11551 AVGKIFSNV True PC9_epitope_Rep6 933.52836676449 933.52726993586 55.532 2 0.08289478356002053 0.003507644522987121 0.9438714419765777 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 1386 8434 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 37.392 2 0.08289448440441798 0.003507644522987121 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 104456 5561 SSLNLRETN True NCI_RA007_Epitope_Rep2 1032.51998690876 1032.5188899358602 26.245 2 0.08288756196820223 0.003507644522987121 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'VIM|p.D429Y|1|0.25|ENSG00000026025|chr10:17236305-17236305|G/T|missense_variant'] 89050 9903 REEFPTLQA True H1975_Epitope_Rep2 1089.5454733806098 1089.54436993586 43.08 2 0.08288373678871919 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 96080 12494 SEDFSPLSP True H1975_Epitope_Rep2 977.43419159613 977.43364496793 53.15 1 0.08287737513794843 0.003507644522987121 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000511829.5_1_5:79738958-79744113:+|nuORF'] 4622 16790 ALAPGLPTA True PC9_epitope_Rep2 809.46470387877 809.4641549679301 69.83 1 0.08286296326636879 0.003507644522987121 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 135137 19766 YAQGLLTGV True PC9_epitope_Rep5 920.4967322830399 920.49562993586 81.073 2 0.082859826413626 0.003507644522987121 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2', 'ENST00000409926.2_1_22:25083318-25083507:+|nuORF'] 114431 10480 TSDVGGYYY True H1975_Epitope_Rep3 1023.4185415319901 1023.41744993586 45.374 2 0.08285381425094365 0.003507644522987121 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 52097 17785 KLNETLENELV True H1975_Epitope_Rep3 1300.68744615668 1300.68634993586 74.398 2 0.08284794518652483 0.003507644522987121 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 6847 9615 AQIEGGVHGL True PC9_epitope_Rep2 979.50869394907 979.50758993586 42.326 2 0.08283768337206568 0.003507644522987121 0.9438714419765777 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 14072 13392 DSDMQTLVY True H1975_Epitope_Rep1 1070.45902644498 1070.45847496793 56.623 1 0.0828307081888332 0.003530827872141233 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 107039 22820 SYLPFTEAF True PC9_epitope_Rep5 1073.5069626135698 1073.50637496793 92.77 1 0.0828301925565412 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 117073 17179 TYQVLAVTF True NCI_RA007_Epitope_Rep5 1040.5542471591598 1040.5531499358601 72.852 2 0.0828136832678586 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 127044 18146 VPYPPLLRA True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 74.589 2 0.08280609937204678 0.003530827872141233 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 96876 10421 SESVPVIAA True H1975_Epitope_Rep2 871.46509780159 871.46400993586 45.097 2 0.08279626520388554 0.003530827872141233 0.9438714419765777 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 124981 14287 VLNEYFHNV True PC9_epitope_Rep6 1133.5505587610498 1133.54946993586 66.848 2 0.08278192367704988 0.003530827872141233 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 28810 14779 FTDGDAALEF True H1975_Epitope_Rep2 1084.4713053808398 1084.47020993586 62.007 2 0.08277971913898768 0.003530827872141233 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 97444 11803 SGGPVVVL True H1975_Epitope_Rep3 726.42759009406 726.4270449679301 50.547 1 0.08277652497379252 0.003530827872141233 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 113636 8786 TRDAPLAV True PC9_epitope_Rep3 841.4657665079299 841.46466993586 38.747 2 0.08276717981906036 0.003530827872141233 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 85967 17966 QPFGDHIISV True PC9_epitope_Rep2 1111.56620882519 1111.5651099358602 74.41 2 0.08276264909851162 0.003530827872141233 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 91588 11982 RPAQPTLWTA True PC9_epitope_Rep6 1139.60874234351 1139.60764993586 57.358 2 0.0827616145364531 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 28816 9894 FTDGQQLY True H1975_Epitope_Rep1 970.43961132974 970.4390649679301 42.992 1 0.08275202618654165 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC'] 23724 23343 EYINFLENL True PC9_epitope_Rep3 1153.5655401188499 1153.56444993586 95.068 2 0.08275191633406352 0.003530827872141233 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 13892 7666 DRDPASGTAL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 34.431 2 0.08275095052681561 0.003530827872141233 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 95162 18034 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41211496793 74.159 1 0.08274080808929625 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 129308 14181 VTDSGPTFNYL True H1975_Epitope_Rep1 1212.56626839484 1212.56516993586 59.722 2 0.08273607923360075 0.003530827872141233 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 5779 17256 APELQGVEV True PC9_epitope_Rep1 940.4865615221598 940.48601496793 71.193 1 0.08272342529493884 0.003530827872141233 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 130492 13489 VTVSDLQHV True PC9_epitope_Rep3 996.5240096600402 996.52290993586 56.936 2 0.0827208598431369 0.003530827872141233 0.9438714419765777 ['ENSG00000068489|ENST00000262293|PRR11'] 35018 14929 GRAPQVLVL True PC9_epitope_Rep2 951.5865503469499 951.58544993586 62.685 2 0.08271709323800462 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 113354 5986 TQKSLSLSPG True NCI_RA007_Epitope_Rep4 1016.5502244078799 1016.54912993586 29.644 2 0.082715415705122 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 11720 14808 DHFRLGSVL True PC9_epitope_Rep6 1042.55597849466 1042.55488993586 68.93 2 0.08270943466891804 0.003530827872141233 0.9438714419765777 ['ENSG00000158435|ENST00000289382|CNOT11'] 108246 9585 TEALHFVAA True H1975_Epitope_Rep2 957.4919812557698 957.49088993586 41.845 2 0.08270569754193653 0.003530827872141233 0.9438714419765777 ['ENSG00000125817|ENST00000379751|CENPB'] 138874 14667 YSDPSVVFV True H1975_Epitope_Rep2 1011.49131254943 1011.4907749679301 61.578 1 0.08268705979156518 0.003530827872141233 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF'] 122815 6127 VGVNGFGR True H1975_Epitope_Rep3 804.4242360491198 804.42312993586 28.58 2 0.08268597258495414 0.003530827872141233 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 35041 7757 GRDENSVEL True PC9_epitope_Rep3 1017.4727023631699 1017.47160993586 34.829 2 0.0826846409770401 0.003530827872141233 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 45016 23614 IQLTALWPIAA True PC9_epitope_Rep5 1195.69649471875 1195.69538993586 95.81 2 0.08266174929653121 0.003530827872141233 0.9438714419765777 ['ENST00000525647.1_1_11:118133556-118134958:-|nuORF', 'ENST00000527282.1_1_11:118133507-118134958:-|nuORF', 'ENSG00000149573|ENST00000278937|MPZL2', 'ENST00000529376.5_1_11:118130767-118134958:-|nuORF'] 96985 5752 SEVLKTVSA True H1975_Epitope_Rep2 932.5178616504401 932.51676993586 27.122 2 0.08264996771297152 0.003530827872141233 0.9438714419765777 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 99118 18500 SLAGGIIGV True PC9_epitope_Rep6 785.46470387877 785.4641549679301 83.802 1 0.08264655526815347 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 57038 17660 LEEFITPIV True H1975_Epitope_Rep2 1059.58521293427 1059.58467496793 73.25 1 0.08264553628161707 0.003530827872141233 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'ENST00000491510.1_1_3:25668659-25671642:-|nuORF', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 37642 9398 HADPTELAL True NCI_RA007_Epitope_Rep5 965.4818104948899 965.48070993586 42.789 2 0.08263331686776405 0.003530827872141233 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 114024 14649 TRMPDGPVAL True PC9_epitope_Rep5 1055.54336520563 1055.54277496793 61.35 1 0.08259928962032187 0.003530827872141233 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 126995 13292 VPWMPPGKSSA True PC9_epitope_Rep3 1155.57466533391 1155.5735699358602 56.162 2 0.08259845490570054 0.003530827872141233 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 27508 20385 FPFAPPAAA True PC9_epitope_Rep1 887.4541391950698 887.45359496793 83.234 1 0.08259086704452148 0.003530827872141233 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 96001 9075 SEAFSVASA True H1975_Epitope_Rep2 867.3974121645899 867.39630993586 39.859 2 0.08257856344575512 0.003530827872141233 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 96180 11635 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.4594649679301 49.744 1 0.08256785244404166 0.003530827872141233 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 113878 8418 TRHGVPISV True PC9_epitope_Rep1 964.5454138109599 964.54430993586 37.215 2 0.08256691217289243 0.003530827872141233 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000484693.1_1_6:30709216-30709507:-|nuORF', 'ENST00000484168.1_1_6:30709216-30709966:-|nuORF'] 92310 9654 RQLPAMTAL True NCI_RA007_Epitope_Rep3 999.5535359665099 999.55242993586 45.052 2 0.0825623896203348 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 73259 7145 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4601949679301 32.418 1 0.08256011605379979 0.003530827872141233 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 31755 11818 GELGAIAQV True NCI_RA007_Epitope_Rep4 856.4654321547599 856.46432993586 52.438 2 0.08255263835924113 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000113657|Q14195|DPYSL3', 'DPYSL3|p.A516Qfs*15|1|0.67|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant', 'ENSG00000113657|ENST00000343218|DPYSL3'] 129907 6035 VTLTSEEEAR True PC9_epitope_Rep2 1133.5564319871298 1133.55532993586 28.607 2 0.08255055737353272 0.0035521606751776082 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 37679 16686 HALGLLYHV True PC9_epitope_Rep1 1021.5709002828102 1021.56980993586 69.01 2 0.08254305168533924 0.0035521606751776082 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 139605 14674 YTRELLLEL True NCI_RA007_Epitope_Rep3 1148.6441247927198 1148.64302993586 65.099 2 0.0825423992564291 0.0035521606751776082 0.9438714419765777 ['ENSG00000129925|ENST00000431232|PGAP6'] 21793 13854 ESDLDYIQY True H1975_Epitope_Rep1 1144.4924347482402 1144.49187496793 58.438 1 0.08253823996450892 0.0035521606751776082 0.9438714419765777 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 25518 7438 FEQEMATAA True NCI_RA007_Epitope_Rep3 996.4222470134398 996.42114993586 36.38 2 0.08253822415488583 0.0035521606751776082 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 64174 11088 LQHEGIFRV True PC9_epitope_Rep2 1097.5981776598098 1097.5970899358601 47.976 2 0.08253545990607447 0.0035521606751776082 0.9438714419765777 ['ENSG00000089820|ENST00000350060|ARHGAP4', 'nc|ENSG00000089820|P98171-2|ARHGAP4', 'ENST00000494397.5_1_X:153175958-153178171:-|nuORF', 'ENST00000470209.5_1_X:153173185-153178999:-|nuORF', 'ENST00000404127.6_1_X:153173185-153186849:-|nuORF', 'ENSG00000266028|ENST00000573034|SRGAP2'] 68064 7269 LTNQEPIA True H1975_Epitope_Rep2 884.4603467743199 884.4597949679301 32.896 1 0.08253246180082832 0.0035521606751776082 0.9438714419765777 ['ENST00000370382.7_2_1:92546128-92605069:+|nuORF', 'nc|ENSG00000189195|Q5XKL5-4|BTBD8', 'nc|ENSG00000189195|Q5XKL5|BTBD8'] 72341 18924 MTDLYPPELF True H1975_Epitope_Rep2 1224.5736622744 1224.5725699358602 78.559 2 0.08252493887687681 0.0035521606751776082 0.9438714419765777 ['ENSG00000148291|ENST00000371964|SURF2'] 114458 9231 TSERGSFSLY True H1975_Epitope_Rep1 1145.53530261973 1145.5342099358602 40.416 2 0.08250953238676541 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'TCF12|p.S223Tfs*22|1|0.16|ENSG00000140262|chr15:57231240-57231240|G/-|frameshift_variant'] 97820 12286 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 55.074 2 0.08249871328136804 0.0035521606751776082 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 96241 8874 SEEPGAPLP True H1975_Epitope_Rep1 895.4287122928699 895.42816496793 39.047 1 0.08249230669921624 0.0035521606751776082 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 32983 11147 GIVEFASK True PC9_epitope_Rep1 849.45961849833 849.45852993586 47.76 2 0.08247779527542919 0.0035521606751776082 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 40044 7716 HQVPAVSSV True PC9_epitope_Rep5 922.4872302285 922.48612993586 34.622 2 0.08245434812707089 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 87356 8013 QTDGTLTY True H1975_Epitope_Rep3 897.40797684829 897.4074249679301 35.795 1 0.08245371012391406 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C'] 117006 10849 TYQDIQNTI True NCI_RA007_Epitope_Rep5 1094.52440358286 1094.52387496793 48.366 1 0.08245181724671702 0.0035521606751776082 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 86362 10233 QQLGKVVQV True PC9_epitope_Rep1 997.5920296502098 997.59092993586 44.242 2 0.08244928735054036 0.0035521606751776082 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 6275 7882 APRPTIINA True PC9_epitope_Rep4 951.5501648382299 951.54906993586 37.747 2 0.08243213260974618 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 35508 9940 GTGIVSAPVPK True PC9_epitope_Rep1 1024.59169529704 1024.5905899358602 43.096 2 0.08243130917830235 0.0035521606751776082 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 8841 14493 AVFPSIVGR True PC9_epitope_Rep6 944.5443511817999 944.54324993586 67.631 2 0.08241760624666744 0.0035521606751776082 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 47439 13873 IYIKQIKTF True PC9_epitope_Rep5 1152.6906810623198 1152.6890249037901 58.382 3 0.0824108363407375 0.0035521606751776082 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 95384 9825 SAIGLADPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43778993586 45.72 2 0.082410279218156 0.0035521606751776082 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 7164 10721 ARDDQIHIL True PC9_epitope_Rep2 1079.57235683479 1079.5712499358601 46.554 2 0.08240367732062015 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 43368 18196 IHNGVIAVF True PC9_epitope_Rep1 968.5443511817999 968.54324993586 74.781 2 0.08240282471461523 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000459857.5_1_22:45072965-45122509:+|nuORF', 'ENST00000492289.5_1_22:45073049-45126704:+|nuORF', 'ENST00000477331.5_1_22:45098405-45122466:+|nuORF'] 95482 19635 SAMEVVPAL True PC9_epitope_Rep4 915.4735543103099 915.47300496793 83.642 1 0.08240021498178887 0.0035521606751776082 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 34711 19226 GQMGSFIRL True PC9_epitope_Rep5 1007.5222358382299 1007.52112993586 78.992 2 0.08239207716789627 0.0035521606751776082 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 48399 6503 KEDGRRWRMFR True NCI_RA007_Epitope_Rep1 1535.7891834003096 1535.7875249037902 29.311 3 0.082390859268016 0.0035521606751776082 0.9438714419765777 ['ENST00000560458.5_1_15:59970098-59981480:-|nuORF', 'ENSG00000140299|ENST00000607373|BNIP2', 'nc|ENSG00000140299|Q12982-2|BNIP2'] 48320 4453 KDREDYVP True NCI_RA007_Epitope_Rep4 1020.4876241513199 1020.48652993586 23.503 2 0.08238041881090162 0.0035521606751776082 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 106555 20355 SVVTSIFGV True PC9_epitope_Rep6 907.5014833103099 907.50038993586 90.994 2 0.08236945436673863 0.0035521606751776082 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 30920 18960 GASENIVIQV True PC9_epitope_Rep5 1028.5502244078798 1028.54912993586 77.954 2 0.08236039553372516 0.0035521606751776082 0.9438714419765777 ['ENSG00000106804|ENST00000223642|C5'] 97997 14296 SHSPPLLQV True PC9_epitope_Rep3 976.53418042092 976.53308993586 60.076 2 0.0823500363637554 0.0035521606751776082 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 72049 14429 MRAFADAL True PC9_epitope_Rep2 893.4429228883698 893.44182993586 60.77 2 0.0823330119825186 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 32781 10894 GIDIFTGK True NCI_RA007_Epitope_Rep1 849.45961849833 849.45852993586 46.368 2 0.08232390412856007 0.0035521606751776082 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 102411 15912 SPVVPQISA True PC9_epitope_Rep2 896.4967322830399 896.49562993586 66.457 2 0.08232093358649868 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 97996 13295 SHSPPLLQV True PC9_epitope_Rep2 976.53418042092 976.53308993586 56.416 2 0.08231429614698521 0.0035521606751776082 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 108976 7660 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46963496793 34.446 1 0.08231308181505172 0.0035521606751776082 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 72055 12983 MRAFADAL True PC9_epitope_Rep6 893.4429228883698 893.44182993586 61.514 2 0.08229634334593142 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 26739 14661 FLDGNEMTL True NCI_RA007_Epitope_Rep3 1038.46919720586 1038.46808993586 65.045 2 0.08229618691305925 0.0035521606751776082 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 76658 22961 NTIPLFVQL True PC9_epitope_Rep3 1043.60153170475 1043.60097496793 93.584 1 0.08229353254159723 0.0035521606751776082 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'JUP|p.R582Q|1|0.15|ENSG00000173801|chr17:41758427-41758427|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 126501 12796 VPNKFLVTA True PC9_epitope_Rep2 987.5753169569099 987.57420993586 54.521 2 0.0822816183023108 0.0035521606751776082 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 97768 11770 SHGPIAVL True PC9_epitope_Rep2 792.4493881678001 792.44828993586 50.605 2 0.08227846783529096 0.0035521606751776082 0.9438714419765777 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 96843 11885 SESPITVEV True H1975_Epitope_Rep3 959.48114178855 959.4805949679301 50.866 1 0.08227793264675397 0.0035521606751776082 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 132819 18926 VYTEAIADI True PC9_epitope_Rep4 993.5018772331298 993.50078993586 80.885 2 0.08227469343184891 0.0035521606751776082 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK'] 101307 19743 SLYGGTITI True PC9_epitope_Rep4 923.49639792987 923.4958449679301 84.065 1 0.08227258277963549 0.0035521606751776082 0.9438714419765777 ['ENSG00000155827|ENST00000389120|RNF20'] 76174 10514 NRSNTVVIM True PC9_epitope_Rep3 1032.53861417836 1032.53750993586 45.381 2 0.08226899781741259 0.0035521606751776082 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1', 'ENST00000379752.5_1_1:157029186-157029948:-|nuORF'] 101828 19167 SPILVATAV True PC9_epitope_Rep2 869.52221875489 869.52112993586 79.099 2 0.08226527887037792 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 106708 20689 SYATLLHVL True PC9_epitope_Rep5 1015.5702315764698 1015.56912993586 84.635 2 0.08226052765562626 0.0035521606751776082 0.9438714419765777 ['ENSG00000183840|ENST00000329321|GPR39'] 25395 20053 FEILPGLSV True H1975_Epitope_Rep3 973.54843350273 973.54788496793 83.926 1 0.08225168731458454 0.0035521606751776082 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 74889 10571 NLQTVNVDEN True PC9_epitope_Rep2 1144.53603089572 1144.5349299358602 45.979 2 0.08224401704677223 0.0035521606751776082 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 74236 14754 NIDPITMAY True H1975_Epitope_Rep1 1036.48993265044 1036.48937496793 61.975 1 0.082241765434649 0.0035521606751776082 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 98823 13156 SITSELHAV True PC9_epitope_Rep2 955.4974605590301 955.49636993586 55.875 2 0.08223833353844817 0.0035521606751776082 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 135855 12148 YEQQTYQVIP True H1975_Epitope_Rep2 1267.60846755999 1267.60736993586 51.813 2 0.08223779204717609 0.0035521606751776082 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000406934.5_1_22:38246060-38259001:+|nuORF', 'ENST00000476955.5_1_22:38245435-38266306:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 124565 4686 VLGPTPVQK True NCI_RA007_Epitope_Rep3 937.55966689277 937.55856993586 25.378 2 0.08223191796818935 0.0035521606751776082 0.9438714419765777 ['ENSG00000166225|ENST00000549921|FRS2'] 40032 5743 HQVLQTRL True NCI_RA007_Epitope_Rep4 993.57196291197 993.57086993586 28.708 2 0.08222749008724015 0.0035521606751776082 0.9438714419765777 ['nc|ENSG00000133059|Q6XUX3-3|DSTYK', 'nc|ENSG00000133059|Q6XUX3-2|DSTYK', 'ENSG00000133059|ENST00000367162|DSTYK'] 8837 16919 AVFPSIVGR True PC9_epitope_Rep3 944.5443511817999 944.54324993586 70.237 2 0.08222645627143588 0.0035521606751776082 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 98023 18587 SHSVFSVTI True PC9_epitope_Rep5 975.50254593947 975.50144993586 76.519 2 0.08221454836520196 0.0035521606751776082 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 42772 15203 IFGVTTLDIVR True H1975_Epitope_Rep1 1232.71287305888 1232.71176993586 63.741 2 0.08221249280742456 0.0035521606751776082 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 114122 13232 TRSAIILHL True PC9_epitope_Rep2 1022.62366413166 1022.62256993586 56.174 2 0.08218113683256005 0.003567245234799276 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1', 'ENST00000518921.1_1_8:63055996-63056374:-|nuORF'] 74674 23461 NLIDLDDLYV True PC9_epitope_Rep3 1191.6023195503901 1191.60177496793 95.522 1 0.08217523917525459 0.003567245234799276 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 21500 12991 ERQSQALIL True PC9_epitope_Rep5 1056.5927579262 1056.5916699358602 54.979 2 0.0821689430408469 0.003567245234799276 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188'] 109661 10296 THDTFQNEL True PC9_epitope_Rep2 1103.48835242731 1103.48724993586 44.933 2 0.08216158883134356 0.003567245234799276 0.9438714419765777 ['ENSG00000198642|ENST00000359039|KLHL9'] 26072 7375 FHDSAVTSV True PC9_epitope_Rep4 961.45051036661 961.44940993586 35.706 2 0.08215946347510253 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 27959 15873 FQSDTNAML True PC9_epitope_Rep5 1025.4487961144498 1025.4476899358601 66.047 2 0.08215091539571341 0.003567245234799276 0.9438714419765777 ['ENSG00000127337|ENST00000247843|YEATS4'] 48396 12752 KEDDLFAIA True H1975_Epitope_Rep2 1020.5127762699999 1020.51166993586 54.153 2 0.08214772874076826 0.003567245234799276 0.9438714419765777 ['FAM21C-LURAP1L|1|fusion', 'FAM21C-LURAP1L|2|fusion', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C'] 118837 5005 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 24.336 2 0.08214156119921898 0.003567245234799276 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 120993 4906 VGEVIVTK True H1975_Epitope_Rep1 843.50656869075 843.50546993586 23.948 2 0.08214140157074858 0.003567245234799276 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 72530 22301 MVDGTLLLL True PC9_epitope_Rep4 973.5518046310099 973.55125496793 94.019 1 0.08213053884473424 0.003567245234799276 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 38825 6046 HIDVGGHM[Oxidation]Y True H1975_Epitope_Rep3 1043.44946520123 1043.44836993586 28.269 2 0.08212675442087002 0.003567245234799276 0.9438714419765777 ['ENSG00000134504|ENST00000580059|KCTD1', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15'] 34531 5117 GQEDHYNNL True PC9_epitope_Rep6 1088.45230127176 1088.45120993586 27.366 2 0.08212253743129491 0.003567245234799276 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 96656 10623 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.46472993586 45.885 2 0.08212028362363026 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 133212 9505 WEDDVNHSF True H1975_Epitope_Rep2 1147.45705229903 1147.4559499358602 41.53 2 0.08211203308610425 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 21703 9615 ERYKEVAEL True PC9_epitope_Rep3 1135.5873381925899 1135.58569490379 41.934 3 0.08210792302139307 0.003567245234799276 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 2611 7773 AESLQPVAA True H1975_Epitope_Rep3 884.4603467743199 884.45924993586 34.883 2 0.08210685367454044 0.003567245234799276 0.9438714419765777 ['ENSG00000038219|ENST00000040738|BOD1L1'] 27364 21613 FMPPGLQEL True PC9_epitope_Rep3 1030.5157534754599 1030.51464993586 88.431 2 0.08209478407279273 0.003567245234799276 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 84534 8819 QHADPPVQI True PC9_epitope_Rep4 1003.50869394907 1003.50758993586 41.453 2 0.08209444075797558 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 6011 7705 APLLQPRAA True PC9_epitope_Rep4 935.5552502186699 935.55414993586 37.024 2 0.0820927675525509 0.003567245234799276 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 84270 12556 QEYFGSLAA True H1975_Epitope_Rep1 984.4552613938797 984.45471496793 53.341 1 0.08208749308900433 0.003567245234799276 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 1518 9948 AEEPWGEEA True H1975_Epitope_Rep2 1016.4087051242799 1016.4081749679301 43.255 1 0.08208652079101446 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 29964 22645 FYAHIIPFL True PC9_epitope_Rep1 1119.6117024656298 1119.61060993586 91.91 2 0.08208620202065926 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000131238|P50897-2|PPT1', 'ENSG00000131238|ENST00000642050|PPT1'] 93821 9725 RVDPAKGLFY True H1975_Epitope_Rep2 1164.6291434349198 1164.6274949037902 42.393 3 0.08207965242100458 0.003567245234799276 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 26466 19574 FIPPDGNFRL True PC9_epitope_Rep2 1174.61349337078 1174.6123899358602 80.673 2 0.08207469054149232 0.003567245234799276 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 138475 20895 YRGIFPVL True PC9_epitope_Rep1 963.5541875895099 963.55308993586 85.193 2 0.08207023209946056 0.003567245234799276 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 116646 21870 TYIPGTQITF True PC9_epitope_Rep1 1139.58627556343 1139.5857749679299 88.935 1 0.08205845424875646 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 130481 15382 VTVPPGPSL True PC9_epitope_Rep6 865.49091862661 865.48982993586 71.312 2 0.08205840104672013 0.003567245234799276 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 23221 7849 EVQLVESGG True NCI_RA007_Epitope_Rep5 916.4501760134399 916.44906993586 36.889 2 0.08205822733300037 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D', 'nc|ENSG00000211958|A0A0C4DH36|IGHV3-38', 'nc|ENSG00000211944|A0A0C4DH30|IGHV3-16', 'nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74', 'nc|ENSG00000211942|P01766|IGHV3-13', 'nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73', 'nc|ENSG00000211957|A0A0C4DH35|IGHV3-35', 'nc|ENSG00000211938|P01780|IGHV3-7'] 116837 12038 TYMKDLYQL True NCI_RA007_Epitope_Rep3 1173.5739966275698 1173.57347496793 54.476 1 0.08205602929582641 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 1011 6465 AEAEPPSEV True H1975_Epitope_Rep3 927.41854153199 927.4179949679301 29.839 1 0.08205288915901061 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 26021 13815 FHDGDSVVF True PC9_epitope_Rep4 1021.4505103666099 1021.44940993586 61.035 2 0.0820507711455817 0.003567245234799276 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant', 'ENST00000483715.5_1_3:49712632-49712743:+|nuORF'] 21236 12354 ERGENYIL True PC9_epitope_Rep5 992.4927095317598 992.49160993586 52.514 2 0.08204970204353992 0.003567245234799276 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF'] 107639 21288 TAIDILTTC True PC9_epitope_Rep5 949.4790336135701 949.4784849679301 86.938 1 0.0820491636352628 0.003567245234799276 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 33341 6700 GLDVEDVK True H1975_Epitope_Rep3 873.4443623570099 873.44326993586 30.726 2 0.0820472688763137 0.003567245234799276 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 137895 7308 YPNSGSVSA True PC9_epitope_Rep3 880.39266113732 880.39156993586 33.115 2 0.08204482100043829 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 16289 5583 EEILAQAK True PC9_epitope_Rep4 900.4916469026 900.49054993586 28.255 2 0.0820296185167003 0.003567245234799276 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 24448 7368 FAHGNAEL True PC9_epitope_Rep5 857.40316625137 857.40206993586 33.298 2 0.0820285415202847 0.003567245234799276 0.9438714419765777 ['ENSG00000122299|ENST00000355758|ZC3H7A', 'nc|ENSG00000122299|Q8IWR0-2|ZC3H7A'] 6927 7160 AQLGEDIR True PC9_epitope_Rep3 900.46649478392 900.46538993586 32.554 2 0.08201996270695988 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG', 'TFG|p.P25R|1|0.33|ENSG00000114354|chr3:100713759-100713759|C/G|missense_variant'] 68826 7981 LVDTAGQDEY True H1975_Epitope_Rep2 1109.48768372097 1109.4871749679298 35.647 1 0.08201190956565271 0.003567245234799276 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000550797.1_1_12:49458888-49462935:-|nuORF', 'ENSG00000167550|ENST00000301068|RHEBL1'] 76273 10700 NSDPGLAVGY True H1975_Epitope_Rep1 991.46107505031 991.46052496793 46.117 1 0.08199418980848985 0.003567245234799276 0.9438714419765777 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 26512 16218 FITDPVVL True H1975_Epitope_Rep3 902.51131971802 902.51077496793 67.839 1 0.08197824346080565 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000418838.1_1_X:40219448-40219874:-|nuORF', 'ENSG00000178035|ENST00000326739|IMPDH2', 'ENST00000491610.1_1_3:49064384-49065376:-|nuORF'] 57317 9990 LEGNLPVSA True H1975_Epitope_Rep3 898.47599683846 898.47488993586 43.463 2 0.08197774007459997 0.003567245234799276 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 106740 17509 SYDPDFNQL True PC9_epitope_Rep6 1097.46655435357 1097.46597496793 79.979 1 0.08197678299266321 0.003567245234799276 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 96195 11830 SEEFPVPPA True H1975_Epitope_Rep3 971.4600124211498 971.4594649679301 50.65 1 0.08197198241075558 0.003567245234799276 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 53996 6529 KYLEERAMRQF True NCI_RA007_Epitope_Rep3 1469.74491854649 1469.74327490379 32.724 3 0.08194803505796182 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 117147 13382 TYSPALNKM[Oxidation]F True PC9_epitope_Rep3 1186.5692459807399 1186.5681499358602 56.505 2 0.08194148674349748 0.003567245234799276 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 24559 20577 FALPGLLHA True PC9_epitope_Rep2 937.5385375253701 937.53798496793 84.581 1 0.08193878769575756 0.003567245234799276 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 57963 7593 LEQQSEITP True H1975_Epitope_Rep2 1043.51350454599 1043.5124099358602 34.158 2 0.0819303391423383 0.003567245234799276 0.9438714419765777 ['ENST00000467307.1_1_12:109509452-109519261:+|nuORF', 'ENSG00000135093|ENST00000257548|USP30'] 137235 13878 YLETVAAYY True H1975_Epitope_Rep3 1091.51752729727 1091.51642993586 58.692 2 0.081924637966218 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 78184 8964 PAPPPPPPP True PC9_epitope_Rep1 865.46978925921 865.46868993586 39.325 2 0.08191373195596689 0.003567245234799276 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 36390 21780 GVIAGLNVL True PC9_epitope_Rep1 854.52255310806 854.52144993586 88.605 2 0.08190534774242157 0.003567245234799276 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 90836 4813 RKVKSTITL True NCI_RA007_Epitope_Rep2 1044.66552894364 1044.6644299358602 23.349 2 0.08190469332195542 0.003567245234799276 0.9438714419765777 ['ENSG00000205186|ENST00000379071|FABP9', 'ENSG00000170323|ENST00000256104|FABP4'] 124385 5870 VLEDSDLK True NCI_RA007_Epitope_Rep1 917.4705771048499 917.46948993586 26.886 2 0.08190267314870693 0.003567245234799276 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5'] 38838 13713 HIGDAVVI True PC9_epitope_Rep1 822.4599528515 822.45884993586 57.596 2 0.08190084994088986 0.003567245234799276 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 575 9934 AARLPLDAA True PC9_epitope_Rep4 896.5079656730799 896.50686993586 45.863 2 0.08189395688702696 0.003567245234799276 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 96245 9074 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 39.855 2 0.08188312298487008 0.003567245234799276 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 8585 19960 AVAELNYGL True PC9_epitope_Rep1 948.4916469026 948.49109496793 81.6 1 0.08188142332183342 0.003567245234799276 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 83730 10753 QEASEAYLV True H1975_Epitope_Rep2 1008.4763907612797 1008.47528993586 46.391 2 0.0818790272581247 0.003567245234799276 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'H3C13|p.G103R|1|0.12|ENSG00000183598|chr1:149813375-149813375|C/G|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 7028 9888 AQSESILKV True PC9_epitope_Rep6 973.54441075145 973.54330993586 48.535 2 0.08186097261219233 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 6667 8712 AQAPDLQRV True PC9_epitope_Rep1 996.5352430500799 996.53414993586 38.349 2 0.08186043284242205 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 95208 8046 SAAM[Oxidation]PGASL True PC9_epitope_Rep2 819.37965430591 819.37854993586 36.308 2 0.08185668061183124 0.003567245234799276 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 133003 21704 VYVLTVTEL True PC9_epitope_Rep5 1035.5852129342697 1035.5841099358602 88.533 2 0.0818564460116751 0.003567245234799276 0.9438714419765777 ['ENSG00000196368|ENST00000375992|NUDT11', 'ENSG00000122824|ENST00000356450|NUDT10'] 101625 16846 SPFGSITSA True PC9_epitope_Rep5 865.4181476091701 865.4175949679301 69.807 1 0.08185525007637338 0.003567245234799276 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 88975 3648 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 18.984 2 0.0818549043653187 0.003567245234799276 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 6107 9753 APM[Oxidation]PPIIHA True PC9_epitope_Rep6 961.50552352537 961.50442993586 47.944 2 0.08185086976270035 0.003567245234799276 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 110113 8591 TIAPALVSK True PC9_epitope_Rep4 898.5487678559 898.54766993586 40.526 2 0.08184668601379767 0.003567245234799276 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 1958 10447 AEIQGVIDA True H1975_Epitope_Rep1 914.4709114580199 914.4703649679301 45.139 1 0.08183788728754353 0.003567245234799276 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENSG00000185009|ENST00000355264|AP3M1'] 40040 7783 HQVPAVSSV True PC9_epitope_Rep3 922.4872302285 922.48612993586 34.931 2 0.08183745586993807 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 96666 10448 SENPSVYVP True NCI_RA007_Epitope_Rep4 990.4658260775799 990.4652749679301 47.038 1 0.08183600521442899 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 59804 17468 LHAQPIISI True PC9_epitope_Rep1 990.58621599378 990.58510993586 71.988 2 0.08183511559629165 0.003567245234799276 0.9438714419765777 ['ENST00000533407.6_1_11:6422737-6440257:-|nuORF', 'ENST00000529778.5_1_11:6422476-6423430:-|nuORF', 'ENST00000526925.6_1_11:6422737-6426086:-|nuORF', 'nc|ENSG00000166313|O00213-4|APBB1', 'nc|ENSG00000166313|O00213-6|APBB1', 'nc|ENSG00000166313|O00213-3|APBB1', 'nc|ENSG00000166313|O00213-5|APBB1', 'APBB1|p.A652Lfs*34|1|0.38|ENSG00000166313|chr11:6395797-6395797|C/-|frameshift_variant', 'nc|ENSG00000166313|O00213-2|APBB1', 'ENSG00000166313|ENST00000609360|APBB1'] 113167 16767 TQDGNIYQL True PC9_epitope_Rep2 1050.4981888350198 1050.49708993586 69.742 2 0.08183062483679159 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 103167 10565 SQPEKVYTL True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 45.529 2 0.08182437004387595 0.003567245234799276 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 13941 15504 DRIKDEFQL True PC9_epitope_Rep1 1162.59823722946 1162.5965849037902 64.458 3 0.08182058638409373 0.003567245234799276 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 114414 9111 TSDTLNNVGY True H1975_Epitope_Rep1 1082.48801807414 1082.48747496793 39.95 1 0.08181682159325342 0.003567245234799276 0.9438714419765777 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1', 'ENST00000483443.1_1_2:238664770-238678725:+|nuORF'] 31633 5627 GEGSPPAVAA True H1975_Epitope_Rep2 854.4133965818999 854.41284496793 26.643 1 0.08181358211509047 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17'] 37883 7359 HEAFNRLLE True H1975_Epitope_Rep3 1127.5723568347898 1127.5712499358601 33.282 2 0.08180933286892005 0.003567245234799276 0.9438714419765777 ['ENSG00000170092|ENST00000625065|SPDYE5', 'ENSG00000260097|ENST00000563237|SPDYE6', 'ENSG00000230358|ENST00000424157|SPDYE21', 'nc|ENSG00000205482|P0DV79|SPDYE18', 'ENSG00000185040|ENST00000633306|SPDYE16', 'nc|ENSG00000179994|Q495Y7|SPDYE7P'] 75532 22079 NQLDSLMGL True PC9_epitope_Rep3 989.48518162317 989.4846349679301 90.222 1 0.08180639164343805 0.003567245234799276 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 139792 19724 YVDDFGVSV True PC9_epitope_Rep4 999.4549270407099 999.45382993586 83.991 2 0.08180488335816574 0.003567245234799276 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 126661 14549 VPRAAFLSP True PC9_epitope_Rep5 956.5443511817999 956.54324993586 60.962 2 0.08180346674746905 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 30128 20638 FYQGIVQQF True PC9_epitope_Rep2 1128.5603951687597 1128.55928993586 84.818 2 0.08179968261423899 0.003567245234799276 0.9438714419765777 ['ENSG00000126216|ENST00000261965|TUBGCP3', 'ENST00000469302.1_1_13:113140309-113144032:-|nuORF'] 67545 14311 LTEPTGLLY True H1975_Epitope_Rep3 1005.5382627418498 1005.53716993586 60.393 2 0.08179450018863821 0.003567245234799276 0.9438714419765777 ['ENSG00000168758|ENST00000305476|SEMA4C'] 32743 15705 GHVVDIVAL True PC9_epitope_Rep6 921.52836676449 921.52726993586 72.624 2 0.08178016103526438 0.003567245234799276 0.9438714419765777 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 9089 15538 AVLDLVHSA True PC9_epitope_Rep2 923.50763131991 923.50652993586 65.039 2 0.08177466198476462 0.003567245234799276 0.9438714419765777 ['ENST00000598755.1_1_19:52104581-52104959:+|nuORF', 'ENSG00000142544|ENST00000421832|CTU1'] 9629 21315 AYGGAFYAF True PC9_epitope_Rep2 965.42831837005 965.4272299358599 87.452 2 0.08176575796802586 0.003567245234799276 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 11734 6192 DHHENKYLL True PC9_epitope_Rep2 1167.56727145435 1167.56563490379 29.209 3 0.08176574929986304 0.003567245234799276 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 61249 19803 LLDRFLATV True PC9_epitope_Rep4 1046.61243074162 1046.61132993586 84.299 2 0.08176279942821288 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 47510 19589 IYLEVIHNL True PC9_epitope_Rep4 1112.6229954253201 1112.62188993586 83.472 2 0.08176082105341435 0.003567245234799276 0.9438714419765777 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'ENST00000491074.5_1_2:183605037-183619453:+|nuORF', 'ENST00000418559.5_1_2:183605037-183617329:+|nuORF'] 43289 20441 IHDPSVFLL True PC9_epitope_Rep2 1039.57023157647 1039.56912993586 84.053 2 0.08175305012790017 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-9|USP54', 'nc|ENSG00000166348|Q70EL1-10|USP54', 'nc|ENSG00000166348|Q70EL1-8|USP54'] 95484 20509 SAMEVVPAL True PC9_epitope_Rep5 915.4735543103099 915.47300496793 83.929 1 0.08174682489805786 0.003567245234799276 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 13853 19625 DRAIPLVL True PC9_epitope_Rep2 895.5491022090699 895.54800993586 80.872 2 0.08174077852851766 0.003567245234799276 0.9438714419765777 ['ENSG00000103381|ENST00000381774|CPPED1'] 96138 11424 SEDYPAALP True H1975_Epitope_Rep2 961.4392769765699 961.43872496793 48.994 1 0.08172318995298251 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 113655 5925 TRDEDHIAL True PC9_epitope_Rep6 1068.51998690876 1068.5188899358602 31.074 2 0.08171129128962762 0.003567245234799276 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 126601 6089 VPPPPPIAR True NCI_RA007_Epitope_Rep5 942.56508662638 942.56398993586 30.102 2 0.0816981193766479 0.003567245234799276 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 62787 18933 LMDPMNVFY True H1975_Epitope_Rep2 1128.49838915916 1128.4972899358602 78.592 2 0.0816967243685011 0.003567245234799276 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 885 5258 ADLSGITK True H1975_Epitope_Rep1 803.43888305375 803.43778993586 25.287 2 0.08169250151718815 0.003567245234799276 0.9438714419765777 ['CON__P34955', 'ENSG00000100665|ENST00000557004|SERPINA4'] 65256 11756 LSEGVTISY True H1975_Epitope_Rep2 967.4862271689901 967.4856749679301 50.295 1 0.08169191689990386 0.003567245234799276 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 75755 12885 NRAINIAL True PC9_epitope_Rep4 883.5239500903899 883.52284993586 57.438 2 0.08169099543015272 0.003567245234799276 0.9438714419765777 ['ENSG00000172336|ENST00000303151|POP7'] 95126 12611 RYVPRASYF True PC9_epitope_Rep5 1157.5981776598098 1157.59654490379 53.509 3 0.08168605021564211 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 52550 6597 KPSESIYSA True PC9_epitope_Rep5 980.48147614172 980.48036993586 30.346 2 0.08168298876767253 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000189057|Q6SJ93-2|FAM111B', 'ENSG00000189057|ENST00000343597|FAM111B'] 105155 5438 STMGYMAAK True NCI_RA007_Epitope_Rep4 958.4252242188999 958.42412993586 27.495 2 0.08167778463876245 0.003567245234799276 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 109876 13717 THMTAIVGM True PC9_epitope_Rep2 959.4568587003499 959.45576993586 58.053 2 0.08167773720536316 0.003567245234799276 0.9438714419765777 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 31095 17466 GAYSPIVLL True H1975_Epitope_Rep1 931.53786881903 931.5373249679301 72.669 1 0.081675972738159 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 140290 12474 YYDKHFTEF True PC9_epitope_Rep2 1248.54513902744 1248.5440499358601 53.291 2 0.08166561952761582 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 30124 10602 FYQEHPDL True PC9_epitope_Rep4 1047.4661604307498 1047.4650699358601 48.527 2 0.08166486108210001 0.003567245234799276 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 71097 8058 METDPQTISA True H1975_Epitope_Rep1 1091.48049016555 1091.47997496793 35.939 1 0.08165933192213937 0.003567245234799276 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 136814 16472 YITERIIAV True PC9_epitope_Rep4 1076.62299542532 1076.62188993586 71.332 2 0.08165626539058463 0.003567245234799276 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 125502 23812 VLVNDFFLV True PC9_epitope_Rep1 1064.5906326678798 1064.59007496793 96.39 1 0.08164403653251216 0.003567245234799276 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E'] 83032 21703 PYLDKFFAL True PC9_epitope_Rep2 1112.59063266788 1112.5895299358601 88.957 2 0.08163639133493071 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 94528 19562 RYIFAKNLF True PC9_epitope_Rep1 1170.6549642599398 1170.65386993586 80.071 2 0.08163098066827033 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 2439 14024 AEQLTLLDA True H1975_Epitope_Rep2 972.5127762699999 972.51166993586 59.093 2 0.08162745745999131 0.003567245234799276 0.9438714419765777 ['ENSG00000237441|ENST00000497454|RGL2', 'ENST00000494550.5_1_6:33263795-33265760:-|nuORF', 'nc|ENSG00000237441|O15211-2|RGL2', 'ENST00000483151.5_1_6:33261379-33266279:-|nuORF', 'nc|ENSG00000107263|Q13905-3|RAPGEF1', 'nc|ENSG00000107263|Q13905-2|RAPGEF1', 'nc|ENSG00000107263|Q13905|RAPGEF1', 'nc|ENSG00000107263|Q13905-4|RAPGEF1', 'ENSG00000107263|ENST00000683357|RAPGEF1'] 21018 10718 ERATAISL True PC9_epitope_Rep3 859.4763311916299 859.4752299358599 46.181 2 0.0816267347957088 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000598459.5_1_19:39949480-39950711:+|nuORF'] 2610 7767 AESLQPVAA True H1975_Epitope_Rep3 884.4603467743199 884.4597949679301 34.861 1 0.08162554157949022 0.003567245234799276 0.9438714419765777 ['ENSG00000038219|ENST00000040738|BOD1L1'] 1644 5621 AEGAPQVEA True H1975_Epitope_Rep2 870.4083112014599 870.40776496793 26.62 1 0.08162246320227512 0.003567245234799276 0.9438714419765777 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'ENSG00000122786|ENST00000361675|CALD1', 'nc|ENSG00000122786|Q05682-5|CALD1', 'nc|ENSG00000122786|Q05682-3|CALD1', 'ENST00000472096.1_1_7:134625950-134632541:+|nuORF'] 40089 7126 HRDERVLSL True PC9_epitope_Rep2 1123.60980497267 1123.60816490379 32.804 3 0.08161104866254666 0.003567245234799276 0.9438714419765777 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 108703 5057 TEMEHEVAC True H1975_Epitope_Rep2 1047.40013166987 1047.3990299358602 24.534 2 0.08160493512701274 0.003567245234799276 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 102605 21203 SQAPFIVAL True PC9_epitope_Rep4 944.5331177917599 944.53256496793 89.722 1 0.08159737369260076 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 72006 23032 MQFGELLAAV True PC9_epitope_Rep2 1077.55286726017 1077.5517699358602 94.085 2 0.08159473596134116 0.003567245234799276 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16', 'nc|ENSG00000291110|Q309B1-2|TRIM16L'] 39628 9325 HPNQPLTITA True PC9_epitope_Rep4 1090.57710786206 1090.5760099358602 43.477 2 0.08159107745825835 0.003567245234799276 0.9438714419765777 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 1105 6159 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 28.663 2 0.08158369513536305 0.003567245234799276 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 70825 5341 MEERAQLEA True H1975_Epitope_Rep2 1075.4968089360298 1075.49570993586 25.593 2 0.0815812118358753 0.003567245234799276 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2'] 76251 17162 NSDLNNLLF True H1975_Epitope_Rep2 1048.5189242796 1048.5178299358602 71.293 2 0.08156883888687971 0.003567245234799276 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 52770 4810 KQQAPPPPP True NCI_RA007_Epitope_Rep3 958.5236157372198 958.52250993586 25.887 2 0.08156653975586974 0.003567245234799276 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant'] 3907 15505 AHDDSVMYL True PC9_epitope_Rep3 1049.44879611445 1049.4476899358601 64.791 2 0.08154041350468022 0.0035774856900572397 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 109562 14673 THASQIELL True PC9_epitope_Rep1 1010.5396597241798 1010.53856993586 61.262 2 0.08153167912671996 0.0035774856900572397 0.9438714419765777 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF', 'ENSG00000124688|ENST00000372171|MAD2L1BP', 'nc|ENSG00000124688|Q15013-3|MAD2L1BP'] 64215 12232 LQIPHGATV True PC9_epitope_Rep2 934.52361573722 934.52250993586 52.362 2 0.08153142466191339 0.0035774856900572397 0.9438714419765777 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1', 'nc|ENSG00000125149|Q9BSU1-2|PHAF1', 'ENST00000569626.1_1_16:67154016-67168169:+|nuORF'] 39567 7316 HPIDDLQSA True PC9_epitope_Rep4 994.47197408718 994.47086993586 35.47 2 0.08152469309573847 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'TRIM59|p.S202Vfs*3|1|0.51|ENSG00000213186|chr3:160438580-160438580|T/-|frameshift_variant', 'ENSG00000213186|ENST00000309784|TRIM59'] 39603 10231 HPLLGVSA True PC9_epitope_Rep2 792.4493881678001 792.4488349679301 44.689 1 0.08152282949441275 0.0035774856900572397 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 25208 9121 FEADPPGQVAA True H1975_Epitope_Rep2 1100.51383889916 1100.51274993586 40.036 2 0.08149863811668402 0.0035774856900572397 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 105393 9097 SVADTVARV True PC9_epitope_Rep4 916.4977949121999 916.49668993586 42.577 2 0.08149375850853234 0.0035774856900572397 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 103300 17459 SQTSATFQL True PC9_epitope_Rep5 981.4767251144499 981.47562993586 72.156 2 0.08144432558009222 0.0035774856900572397 0.9438714419765777 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 85827 15633 QMISRIEYI True PC9_epitope_Rep6 1151.60088008175 1151.5997899358601 72.334 2 0.0814316296002083 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E'] 41099 17499 HYMPPPYASL True PC9_epitope_Rep1 1174.5481162328997 1174.5470099358602 72.104 2 0.08142937271206431 0.0035774856900572397 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 95534 7688 SAQSFFENK True NCI_RA007_Epitope_Rep5 1056.48762415132 1056.48652993586 36.275 2 0.08142572948307603 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 38513 4077 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 22.544 2 0.08142549304279544 0.0035774856900572397 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 103636 19226 SRDLSLLI True PC9_epitope_Rep2 915.5389314481899 915.53782993586 79.325 2 0.08141812693811239 0.0035774856900572397 0.9438714419765777 ['ENSG00000242550|ENST00000238508|SERPINB10'] 17265 10483 EHAVGYAL True PC9_epitope_Rep1 858.42356734278 858.42246993586 45.211 2 0.08141785438952924 0.0035774856900572397 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000494697.5_1_20:2633306-2634895:+|nuORF', 'ENST00000470143.1_1_20:2633306-2634188:+|nuORF'] 133214 6124 WEDEGVRA True H1975_Epitope_Rep3 960.4301092751998 960.42900993586 28.568 2 0.08141078842056412 0.0035774856900572397 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 96533 9141 SELPAPPAA True H1975_Epitope_Rep3 851.4388830537499 851.43833496793 40.151 1 0.0814045482026216 0.0035774856900572397 0.9438714419765777 ['ENST00000584717.1_1_17:80059560-80064242:-|nuORF'] 97923 16679 SHNPLANIL True PC9_epitope_Rep6 977.52942939365 977.52832993586 76.626 2 0.08139240263526956 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 91760 11020 RPKPSSSPVIF True PC9_epitope_Rep1 1213.68190728377 1213.68025490379 47.276 3 0.08138765904148446 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 103923 5504 SRPEANEAL True PC9_epitope_Rep5 985.4828731240499 985.48176993586 26.18 2 0.08138261303164822 0.0035774856900572397 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 83152 13286 PYSGSPANF True PC9_epitope_Rep5 938.4133965819 938.41228993586 56.114 2 0.08138201730775596 0.0035774856900572397 0.9438714419765777 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'ENST00000579558.5_1_17:18243959-18259295:-|nuORF'] 76094 14408 NRNEDPLVL True PC9_epitope_Rep3 1068.55637241748 1068.55526993586 60.52 2 0.0813791141212814 0.0035774856900572397 0.9438714419765777 ['ENSG00000165355|ENST00000298097|FBXO33'] 118876 11249 VEEMGVPVAA True H1975_Epitope_Rep2 1000.4899326504398 1000.4893749679301 48.313 1 0.08137493754121737 0.0035774856900572397 0.9438714419765777 ['ENST00000585968.5_1_19:36103696-36110661:+|nuORF', 'ENSG00000249115|ENST00000203166|HAUS5', 'ENST00000588570.5_1_19:36103696-36104695:+|nuORF', 'ENST00000428854.5_1_19:36103723-36104803:+|nuORF', 'nc|ENSG00000249115|O94927-2|HAUS5'] 137858 7949 YPIEHGIVTN True H1975_Epitope_Rep3 1141.5767735088898 1141.57566993586 35.545 2 0.08137113534709405 0.0035774856900572397 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 47396 8109 IYIKHPHLF True NCI_RA007_Epitope_Rep5 1166.66004964038 1166.6584049037901 37.878 3 0.08136951807027754 0.0035774856900572397 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 116900 14862 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47107496793 61.986 1 0.0813605547782958 0.0035774856900572397 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 24698 14442 FAVAPNQNL True PC9_epitope_Rep6 972.50288029264 972.50178993586 67.443 2 0.08135542904041201 0.0035774856900572397 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 125745 9842 VNFTVDQIR True NCI_RA007_Epitope_Rep4 1090.5771078620598 1090.5760099358602 44.704 2 0.08134240355319493 0.0035774856900572397 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000594885.1_1_19:3984132-3985378:-|nuORF'] 102124 7970 SPQQPGLSA True PC9_epitope_Rep5 883.4399456829099 883.43884993586 35.597 2 0.08133841772506852 0.0035774856900572397 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 1686 10216 AEGPEVICA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 44.3 1 0.0813383240352358 0.0035774856900572397 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 44507 12201 IPAAIATA True PC9_epitope_Rep5 726.4275900940601 726.4270449679301 51.916 1 0.08133327175778401 0.0035774856900572397 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 113608 8107 TRATEGMVVA True PC9_epitope_Rep3 1033.5226297610498 1033.5215299358601 36.16 2 0.08131773086822483 0.0035774856900572397 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 140919 21450 YYYINYTTI True PC9_epitope_Rep1 1212.5702911461199 1212.56918993586 87.347 2 0.0813099283702787 0.0035774856900572397 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 47639 18918 IYPPINVLPSL True NCI_RA007_Epitope_Rep4 1224.71181042972 1224.7107099358602 81.801 2 0.08130866561287303 0.0035774856900572397 0.9438714419765777 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 97798 12659 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 54.0 2 0.08130686773956743 0.0035774856900572397 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 1681 9773 AEGPEVICA True H1975_Epitope_Rep1 887.4058686733099 887.40531496793 42.521 1 0.08128905621881732 0.0035774856900572397 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 84946 20480 QHWPVFVEV True PC9_epitope_Rep2 1139.5763795860698 1139.5752899358602 84.208 2 0.08128075784508593 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000114544|Q96GZ6-6|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-7|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-5|SLC41A3', 'ENSG00000114544|ENST00000360370|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-2|SLC41A3', 'nc|ENSG00000114544|Q96GZ6|SLC41A3'] 136442 13082 YHGEVPVSL True PC9_epitope_Rep4 999.5025459394699 999.50144993586 58.212 2 0.08126454960196186 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'ENST00000530775.1_1_11:66454463-66454959:-|nuORF'] 12513 10727 DLAGSIIGK True NCI_RA007_Epitope_Rep1 872.4967322830399 872.49562993586 45.717 2 0.08126293816689961 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 110029 20696 THVDILNDFTL True PC9_epitope_Rep4 1286.65066672514 1286.6495699358602 87.768 2 0.08125407811814457 0.0035774856900572397 0.9438714419765777 ['ENSG00000114491|ENST00000232607|UMPS', 'nc|ENSG00000114491|P11172-4|UMPS', 'nc|ENSG00000114491|P11172-2|UMPS', 'nc|ENSG00000114491|P11172-3|UMPS'] 48493 8841 KEFIKIVEA True NCI_RA007_Epitope_Rep2 1075.62774645259 1075.62664993586 39.038 2 0.08124955275801059 0.0035774856900572397 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 113349 5520 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.54912993586 28.712 2 0.08122794323656866 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 114878 6129 TTDSSYGQNY True H1975_Epitope_Rep3 1134.4465471849799 1134.44597496793 28.587 1 0.08121455028994258 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 94788 16130 RYLQDLLAW True NCI_RA007_Epitope_Rep3 1176.6291434349198 1176.6280499358602 71.148 2 0.08121446461585315 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 31083 11559 GAYGKVFLV True H1975_Epitope_Rep1 952.5382031721999 952.53710993586 49.449 2 0.08121442970062205 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000100784|O75582-2|RPS6KA5', 'ENSG00000100784|ENST00000614987|RPS6KA5', 'ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 8394 5229 ATPTSPIRVK True NCI_RA007_Epitope_Rep2 1068.6291434349198 1068.6280499358602 24.96 2 0.08120353560055568 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 72692 21496 MYLKITQII True PC9_epitope_Rep5 1121.6518530254498 1121.6507499358602 87.719 2 0.08119647144437675 0.0035774856900572397 0.9438714419765777 ['ENST00000503561.7_1_5:49963943-50055521:+|nuORF'] 77288 19934 NYISGIQTI True PC9_epitope_Rep5 1007.52876068731 1007.52817496793 81.731 1 0.08119034208525658 0.0035774856900572397 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 12385 10630 DKDEIPTISSY True H1975_Epitope_Rep3 1266.59796244594 1266.59686993586 45.96 2 0.08118867698005448 0.0035774856900572397 0.9438714419765777 ['ENSG00000227729|ENST00000557640|RD3L'] 96027 9841 SEALPSDIA True H1975_Epitope_Rep3 901.43927697657 901.43872496793 42.882 1 0.08118856760560025 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 31537 13554 GEFGGFGSV True NCI_RA007_Epitope_Rep5 855.3762827971899 855.37573496793 58.824 1 0.08117759964485259 0.0035774856900572397 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 9954 5941 AYRQGHFTY True PC9_epitope_Rep2 1141.53049202281 1141.52884490379 28.241 3 0.0811764891182905 0.0035774856900572397 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 72573 16330 MVPEDVPRL True PC9_epitope_Rep1 1054.5481162329 1054.5470099358602 67.632 2 0.08117366688299907 0.0035774856900572397 0.9438714419765777 ['ENSG00000272333|ENST00000420124|KMT2B'] 103188 12917 SQPPVQVSV True PC9_epitope_Rep4 939.5025459394699 939.50144993586 57.57 2 0.08115797680516164 0.0035774856900572397 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 83049 21814 PYLDSFYEY True PC9_epitope_Rep5 1195.5073565363898 1195.50677496793 88.94 1 0.08115797384891432 0.0035774856900572397 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 38787 7179 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.5406899358602 33.005 2 0.0811574046287748 0.0035774856900572397 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 8331 19797 ATLPTTLGV True PC9_epitope_Rep1 871.5014833103099 871.50038993586 80.97 2 0.08115071538073214 0.0035774856900572397 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 40210 4098 HRGTGIAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 22.642 2 0.08115023168600241 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 14029 4830 DSAPSPPPP True H1975_Epitope_Rep3 863.40249754503 863.40194496793 23.704 1 0.08114914411218375 0.0035774856900572397 0.9438714419765777 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 72460 23394 MTVDDLLSL True PC9_epitope_Rep3 1005.5052483614099 1005.50414993586 95.266 2 0.08114077278517515 0.0035774856900572397 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 37548 19417 GYNVKFDMF True PC9_epitope_Rep4 1119.5059170677498 1119.50480993586 82.799 2 0.08113336242312333 0.0035774856900572397 0.9438714419765777 ['ENST00000589115.5_1_19:1105440-1106426:+|nuORF', 'ENST00000588919.5_1_19:1105440-1106636:+|nuORF', 'nc|ENSG00000167468|P36969-2|GPX4', 'ENSG00000167468|ENST00000354171|GPX4'] 76238 11032 NSATGVPTV True PC9_epitope_Rep5 844.42904664604 844.4284949679301 47.424 1 0.08113213183062576 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 96466 8169 SEITDTVAA True H1975_Epitope_Rep3 905.43419159613 905.43364496793 36.401 1 0.08112269745844528 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 35019 15019 GRAPQVLVL True PC9_epitope_Rep2 951.5865503469499 951.58544993586 63.023 2 0.08111843754124738 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 25927 5860 FGPGIEGK True H1975_Epitope_Rep3 803.41775368635 803.41664993586 27.554 2 0.08109502008827187 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 94926 8026 RYPDSHQLF True NCI_RA007_Epitope_Rep4 1161.55670677065 1161.5550749037902 37.638 3 0.08109388052586623 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 72592 9396 MVRPVAVAA True PC9_epitope_Rep5 912.5215075622399 912.52040993586 41.096 2 0.08109362904639064 0.0035774856900572397 0.9438714419765777 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 8815 19920 AVFPHLTVV True PC9_epitope_Rep3 981.5647522732099 981.56364993586 81.863 2 0.08107588883101162 0.0035774856900572397 0.9438714419765777 ['ENSG00000134825|ENST00000537328|TMEM258'] 108682 9817 TELQPALSA True H1975_Epitope_Rep2 928.4865615221598 928.48546993586 42.745 2 0.08107476313758459 0.0035774856900572397 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000551842.5_1_12:57881873-57883359:+|nuORF', 'ENST00000553162.5_1_12:57881873-57883795:+|nuORF'] 135771 8150 YENEVALR True PC9_epitope_Rep5 992.4927095317598 992.49160993586 36.288 2 0.08106169227545475 0.0035774856900572397 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 21756 8017 ESDAPGPVY True H1975_Epitope_Rep3 933.40797684829 933.4074249679301 35.81 1 0.08105523572415299 0.0035774856900572397 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 75116 9111 NMVAKVDEV True PC9_epitope_Rep4 1003.5008316873099 1003.49972993586 42.631 2 0.08104996253512982 0.0035774856900572397 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 96935 8461 SEVATLTAA True H1975_Epitope_Rep3 861.4443623570099 861.44381496793 37.53 1 0.0810454292604635 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 68108 7323 LTPEELER True PC9_epitope_Rep6 985.5080252427299 985.50692993586 37.339 2 0.0810410299609676 0.0035774856900572397 0.9438714419765777 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 67827 20758 LTIEDGIFEV True PC9_epitope_Rep6 1134.58085582982 1134.57974993586 92.605 2 0.08104013563425792 0.0035774856900572397 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 99572 17582 SLFGGSVKL True PC9_epitope_Rep4 906.51746772762 906.51636993586 75.645 2 0.08103947758407194 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'nc|ENSG00000170248|Q8WUM4-3|PDCD6IP', 'ENST00000477798.5_1_3:33840175-33866683:+|nuORF'] 108619 6140 TEISTKEVP True H1975_Epitope_Rep3 1002.5233409536999 1002.52224993586 28.628 2 0.08103172472401397 0.0035774856900572397 0.9438714419765777 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF'] 115633 23392 TVISLLTGL True PC9_epitope_Rep3 915.56408356687 915.56298993586 95.259 2 0.08102892058195241 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant', 'ENST00000462818.1_1_3:136219063-136323180:-|nuORF', 'STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 1750 17315 AEGWMDWAA True H1975_Epitope_Rep2 1035.4120166829098 1035.41147496793 71.895 1 0.08102791960447842 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1'] 63910 17014 LPVWLENHTA True PC9_epitope_Rep4 1178.60840799034 1178.60730993586 73.437 2 0.08102126822808936 0.0035774856900572397 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 136759 19721 YIPTELDQV True PC9_epitope_Rep2 1076.53899101784 1076.5378899358602 81.246 2 0.08101992393506675 0.0035774856900572397 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 126913 9862 VPVDTGVAA True PC9_epitope_Rep2 827.4388830537498 827.43833496793 43.267 1 0.08101352561245924 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 34607 8214 GQHSISYTL True NCI_RA007_Epitope_Rep4 1004.4927095317599 1004.49160993586 38.382 2 0.08100074877155067 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000174516|Q8N2H9-4|PELI3', 'nc|ENSG00000174516|Q8N2H9-3|PELI3', 'nc|ENSG00000174516|Q8N2H9-2|PELI3', 'ENSG00000174516|ENST00000320740|PELI3', 'ENSG00000139946|ENST00000267460|PELI2'] 120316 16336 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 67.971 2 0.08099698181422657 0.0035774856900572397 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 70040 15955 LYGRHFNYL True PC9_epitope_Rep3 1181.59817765981 1181.59654490379 66.518 3 0.08099576207962758 0.0035774856900572397 0.9438714419765777 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 103415 19824 SQYGEIVNI True PC9_epitope_Rep3 1021.5080252427299 1021.5074749679301 81.487 1 0.08098509857838307 0.0035774856900572397 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 107209 22875 SYPDLLPTF True PC9_epitope_Rep5 1051.52261267771 1051.5215099358602 92.987 2 0.080981059252185 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 132546 22761 VYPGLAVFF True PC9_epitope_Rep4 1011.5429541994698 1011.54184993586 95.768 2 0.08097984721983982 0.0035774856900572397 0.9438714419765777 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 131824 21123 VYAPPVGGFSF True PC9_epitope_Rep4 1139.56514619603 1139.56457496793 89.412 1 0.08097267360072338 0.0035774856900572397 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 117081 22035 TYQVLAVTF True PC9_epitope_Rep5 1040.5542471591598 1040.5531499358601 89.784 2 0.08095410903956728 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 30918 18597 GASENIVIQV True PC9_epitope_Rep2 1028.5502244078798 1028.5496749679298 76.885 1 0.08095138291755175 0.0035774856900572397 0.9438714419765777 ['ENSG00000106804|ENST00000223642|C5'] 73367 7188 NEQGSYVVA True H1975_Epitope_Rep3 965.4454249861698 965.4448749679301 32.623 1 0.08094864361164586 0.0035774856900572397 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 8184 9374 ATGENLPRV True PC9_epitope_Rep3 955.5086939490699 955.50758993586 40.996 2 0.0809471279372888 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-3|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 89595 5873 RESNNMVVP True NCI_RA007_Epitope_Rep3 1044.5022286696399 1044.50112993586 30.079 2 0.08091580167220545 0.0035774856900572397 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000589947.7_1_19:19459550-19465349:+|nuORF'] 132818 19646 VYTEAIADI True PC9_epitope_Rep2 993.5018772331298 993.50078993586 80.953 2 0.0809122019325925 0.0035774856900572397 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK'] 8352 14105 ATLSKIIQV True PC9_epitope_Rep6 971.6015317047498 971.60042993586 66.128 2 0.08090824109952996 0.0035774856900572397 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 109803 7000 THIVGTEV True PC9_epitope_Rep4 854.4497820906199 854.44868993586 34.172 2 0.08090043996531705 0.0035774856900572397 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 77237 20278 NYIKDLNIL True PC9_epitope_Rep1 1104.61791004488 1104.6168099358601 82.826 2 0.08090007189573767 0.0035774856900572397 0.9438714419765777 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 122822 7570 VGVNGFGR True PC9_epitope_Rep2 804.4242360491198 804.42312993586 34.488 2 0.08089524931465208 0.0035774856900572397 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 1701 5701 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41284496793 26.925 1 0.0808849596077997 0.0035774856900572397 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 112861 11962 TPNRATFVV True PC9_epitope_Rep3 1003.5450794577899 1003.5439899358599 51.036 2 0.08087811291274602 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 104195 15870 SSDGAISLLTY True H1975_Epitope_Rep1 1125.55536935797 1125.55477496793 66.353 1 0.08087798220174883 0.0035774856900572397 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 74090 15980 NHVISPLL True PC9_epitope_Rep1 891.5178020807899 891.51670993586 66.276 2 0.08086538618293454 0.0035774856900572397 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 2177 11467 AEMSTPLSV True H1975_Epitope_Rep1 933.44773348529 933.44662993586 49.09 2 0.0808605294107246 0.0035774856900572397 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1'] 22435 11963 ETFSYPESY True H1975_Epitope_Rep1 1121.4553209635299 1121.4542299358602 51.02 2 0.08085396035735837 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000047634|Q9UN30-2|SCML1', 'nc|ENSG00000047634|Q9UN30-1|SCML1', 'ENSG00000047634|ENST00000380041|SCML1'] 7819 12398 ATADYICKV True PC9_epitope_Rep2 982.4793679667399 982.47826993586 52.998 2 0.08083385068346004 0.0035774856900572397 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 4098 11212 AHSPLAAQL True PC9_epitope_Rep5 906.4923156089401 906.49120993586 48.115 2 0.08083022450611733 0.0035774856900572397 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 87621 7804 QTVAVGVIK True PC9_epitope_Rep6 913.5596668927699 913.55856993586 39.408 2 0.08082339712812336 0.0035774856900572397 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 95399 10546 SAIQSISHV True PC9_epitope_Rep1 940.4977949122 940.49668993586 45.455 2 0.0808231773493562 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 32988 9402 GIVEFSGK True PC9_epitope_Rep2 835.44396843419 835.44286993586 41.504 2 0.08081357052391659 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 97831 13825 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.4914349679301 58.198 1 0.080811968276234 0.0035774856900572397 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 44699 15949 IPNPAQTSVVV True PC9_epitope_Rep6 1123.62372370131 1123.62262993586 73.644 2 0.0808091522021945 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 102347 5677 SPVFTSRSAA True PC9_epitope_Rep2 1021.51925863277 1021.51816993586 27.225 2 0.08079564832061789 0.0035774856900572397 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 108482 7411 TEETATTVVAA True H1975_Epitope_Rep2 1091.5346339133898 1091.53352993586 33.449 2 0.08078330728199658 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 102808 17158 SQFPEEILL True NCI_RA007_Epitope_Rep3 1074.55972646242 1074.5586299358602 75.376 2 0.0807798630423707 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 15056 7501 EAALSTALSEK True H1975_Epitope_Rep3 1118.58191845898 1118.58082993586 33.834 2 0.08077453532436528 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 22095 20500 ESVAILPQL True PC9_epitope_Rep5 968.55424715916 968.55314993586 83.892 2 0.08076694410737698 0.0035774856900572397 0.9438714419765777 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 106333 10029 SVSDIIVVAK True NCI_RA007_Epitope_Rep4 1029.60701100801 1029.6059099358602 45.42 2 0.08076349255366753 0.0035774856900572397 0.9438714419765777 ['ENST00000583120.1_1_17:31258522-31263466:+|nuORF', 'ENSG00000006042|ENST00000579849|TMEM98'] 104046 10911 SRTGEMTVL True PC9_epitope_Rep1 992.49608066004 992.49498993586 46.855 2 0.08075662164436853 0.0035774856900572397 0.9438714419765777 ['ENSG00000168495|ENST00000306433|POLR3D'] 96323 11227 SEEVTPIAV True H1975_Epitope_Rep3 943.4862271689899 943.4856749679301 48.286 1 0.0807565661146966 0.0035774856900572397 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 61216 20675 LLDPNVKSIFV True PC9_epitope_Rep5 1243.71762408615 1243.71652993586 84.581 2 0.08075321610235503 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000117419|O43414-3|ERI3', 'nc|ENSG00000117419|O43414-2|ERI3', 'ENSG00000117419|ENST00000372257|ERI3'] 31864 5015 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep2 977.4124109861698 977.41130993586 24.373 2 0.0807329389398718 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 25222 9866 FEAPATINSA True H1975_Epitope_Rep3 1019.49237517859 1019.49187496793 42.979 1 0.08073150810135732 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 33403 18788 GLFIIDGK True PC9_epitope_Rep3 861.4960040070499 861.49490993586 77.491 2 0.0807228287995697 0.0035774856900572397 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF'] 71424 23527 MIPLLLAAL True PC9_epitope_Rep4 953.5983609006099 953.59726993586 98.801 2 0.08072080363802187 0.0035774856900572397 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 39538 18830 HPFGFVAV True PC9_epitope_Rep5 872.4544735482399 872.45336993586 77.444 2 0.08071297334451076 0.0035774856900572397 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 13854 19886 DRAIPLVL True PC9_epitope_Rep5 895.5491022090699 895.54800993586 81.544 2 0.08070483188900321 0.0035774856900572397 0.9438714419765777 ['ENSG00000103381|ENST00000381774|CPPED1'] 136906 13004 YKDGTELEL True PC9_epitope_Rep2 1066.51825557326 1066.51767496793 55.306 1 0.08070372641615992 0.0035774856900572397 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 7490 13005 ASEDSVLLY True H1975_Epitope_Rep1 995.4811417885501 995.4805949679301 55.106 1 0.08068505137148264 0.0035774856900572397 0.9438714419765777 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 63581 23126 LPLLIAPALAA True PC9_epitope_Rep5 1061.68486740589 1061.68376993586 93.941 2 0.08067244625759873 0.0035774856900572397 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 86829 13872 QRPPTIVL True PC9_epitope_Rep5 922.5600012459399 922.55890993586 58.378 2 0.08066910011976361 0.0035774856900572397 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 15029 7065 EAAAAVVAAA True H1975_Epitope_Rep2 842.4497820906199 842.44923496793 32.104 1 0.08066450201046751 0.0035774856900572397 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000398654.7_1_18:44497289-44497409:-|nuORF'] 63807 12401 LPSRFIESA True PC9_epitope_Rep2 1018.5447451046199 1018.54364993586 53.009 2 0.08065595130174548 0.0035774856900572397 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 26051 14965 FHDMGGVQL True PC9_epitope_Rep2 1002.4593012284997 1002.4582099358599 62.821 2 0.0806468921301689 0.0035774856900572397 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 113185 13003 TQDGTPITV True PC9_epitope_Rep5 930.4658260775799 930.4652749679301 55.024 1 0.08064244979570076 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 2688 5908 AETDKIVVG True NCI_RA007_Epitope_Rep4 930.5022115862998 930.50110993586 29.348 2 0.08063190619055495 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'ENST00000557486.1_1_14:73748983-73753845:-|nuORF', 'ENST00000553997.5_1_14:73748216-73753941:-|nuORF'] 728 15300 AAVPGKTFVNI True PC9_epitope_Rep2 1115.63389446219 1115.63278993586 64.133 2 0.08063150123915354 0.0035774856900572397 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 17218 14168 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50708496793 62.402 1 0.08062320677783727 0.0035774856900572397 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 103598 14807 SRDKTIIM[Oxidation]W True PC9_epitope_Rep5 1164.59612943492 1164.59449490379 61.954 3 0.08061810135391455 0.0035774856900572397 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 25874 6192 FGHGAEDSL True NCI_RA007_Epitope_Rep5 931.40356017419 931.40246993586 30.496 2 0.08061226620755094 0.0035774856900572397 0.9438714419765777 ['ENSG00000173432|ENST00000356524|SAA1'] 67143 16348 LTDEAFEFY True H1975_Epitope_Rep3 1133.49170647225 1133.4906099358602 68.356 2 0.08061111503876278 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 9387 14550 AVVESMVTA True PC9_epitope_Rep5 905.4528188657299 905.45172993586 60.966 2 0.08059763770014389 0.0035774856900572397 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 105969 20162 SVLGSLSSV True PC9_epitope_Rep1 847.4650978015901 847.46400993586 82.382 2 0.08059622028677677 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF'] 6314 6124 APRQPGLM[Oxidation]A True PC9_epitope_Rep3 955.4909360903898 955.48982993586 28.603 2 0.08056832943523083 0.0035774856900572397 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 138306 17754 YRAPELLL True PC9_epitope_Rep2 973.5596668927699 973.55856993586 73.572 2 0.08055704960706528 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF', 'CDK19|p.G207V|2|0.16|ENSG00000155111|chr6:110632056-110632056|C/A|missense_variant', 'ENSG00000155111|ENST00000368911|CDK19', 'ENSG00000132964|ENST00000381527|CDK8', 'nc|ENSG00000155111|Q9BWU1-2|CDK19', 'CDK8|p.H300Qfs*3|1|0.14|ENSG00000132964|chr13:26397191-26397192|AT/-|frameshift_variant', 'ENST00000561477.1_1_16:89758247-89760641:+|nuORF', 'nc|ENSG00000132964|P49336-2|CDK8', 'ENST00000472018.5_1_16:89760470-89762097:+|nuORF', 'ENST00000505733.5_1_16:89758861-89762180:+|nuORF', 'nc|ENSG00000185324|Q15131-4|CDK10', 'nc|ENSG00000185324|Q15131-3|CDK10', 'nc|ENSG00000185324|Q15131-7|CDK10', 'nc|ENSG00000185324|Q15131-2|CDK10', 'ENSG00000185324|ENST00000353379|CDK10'] 1616 6522 AEFVEVTK True H1975_Epitope_Rep3 921.4807478657299 921.47964993586 30.054 2 0.08055265135219757 0.0035774856900572397 0.9438714419765777 ['CON__P02769'] 59801 7449 LHAQGDPAL True PC9_epitope_Rep3 920.4715801643599 920.47048993586 33.657 2 0.08054670534897145 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000257365|P49356-2|FNTB', 'ENSG00000257365|ENST00000246166|FNTB'] 86370 10150 QQLGKVVQV True PC9_epitope_Rep5 997.5920296502098 997.59092993586 44.029 2 0.08054598098865762 0.0035774856900572397 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 59879 6163 LHHDDPEVL True PC9_epitope_Rep2 1073.51417325233 1073.5130699358601 29.098 2 0.08054331636836841 0.0035774856900572397 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 104982 9341 STIEYVIQR True NCI_RA007_Epitope_Rep2 1107.59242357303 1107.59187496793 40.943 1 0.08053941807308274 0.0035774856900572397 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 34871 12412 GQVIKGIGV True PC9_epitope_Rep5 869.5334521449298 869.53234993586 52.741 2 0.08053092697234532 0.0035774856900572397 0.9438714419765777 ['ENSG00000171497|ENST00000307720|PPID'] 84226 5559 QEVAQVASA True H1975_Epitope_Rep3 901.4505103666098 901.44940993586 26.429 2 0.08050477922568251 0.0035774856900572397 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 135894 9233 YESSTASALVA True H1975_Epitope_Rep3 1097.52406922969 1097.5229699358601 40.506 2 0.08048866469928376 0.0035774856900572397 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 29081 20087 FTQDSNYLL True PC9_epitope_Rep3 1099.51858992643 1099.51807496793 82.517 1 0.08048313005818453 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 75896 7526 NRDRTQIAL True PC9_epitope_Rep1 1085.59415490853 1085.59304993586 33.766 2 0.08048145007362192 0.0035774856900572397 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 88212 14054 QYASAFHFL True NCI_RA007_Epitope_Rep5 1082.51853035678 1082.51742993586 60.748 2 0.08048056288791298 0.0035774856900572397 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 6075 13641 APMPPIIHA True PC9_epitope_Rep4 945.51060852537 945.50950993586 60.362 2 0.08047567392135101 0.0035774856900572397 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 74244 14691 NIDPITMAY True H1975_Epitope_Rep3 1036.48993265044 1036.48937496793 61.881 1 0.08047542306845308 0.0035774856900572397 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 84605 4984 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 24.54 2 0.08047452424951908 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 113983 15541 TRLPALTV True PC9_epitope_Rep5 869.5334521449299 869.53234993586 64.788 2 0.08045620220136665 0.0035774856900572397 0.9438714419765777 ['ENSG00000197746|ENST00000394936|PSAP', 'nc|ENSG00000197746|P07602-2|PSAP', 'nc|ENSG00000197746|P07602-3|PSAP'] 76197 7549 NRVGDEGAQAL True PC9_epitope_Rep5 1128.5523496662 1128.5512499358601 33.987 2 0.080453957816118 0.0035774856900572397 0.9438714419765777 ['ENSG00000167207|ENST00000647318|NOD2', 'nc|ENSG00000167207|Q9HC29|NOD2'] 11727 16126 DHGGVIVAI True PC9_epitope_Rep5 879.48141657207 879.48030993586 67.019 2 0.08045079124338086 0.0035774856900572397 0.9438714419765777 ['ENSG00000184985|ENST00000507866|SORCS2'] 88142 19132 QWPPDPPLHF True PC9_epitope_Rep6 1232.59784330664 1232.59674993586 86.242 2 0.08044841989651037 0.0035774856900572397 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 107206 22820 SYPDLLPTF True PC9_epitope_Rep3 1051.52261267771 1051.5215099358602 93.047 2 0.08042876212613997 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 57189 8353 LEESSPIAA True H1975_Epitope_Rep3 915.4549270407099 915.4543749679301 37.114 1 0.08042710065090425 0.0035774856900572397 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 103837 15007 SRIDIANTL True PC9_epitope_Rep5 1001.5505587610501 1001.54946993586 62.728 2 0.0804211963133091 0.0035774856900572397 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 95457 20209 SALPFITYL True H1975_Epitope_Rep3 1023.5640835668698 1023.56298993586 84.525 2 0.08042107375355001 0.0035774856900572397 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 8528 3828 ATVTPSPVK True NCI_RA007_Epitope_Rep5 898.5123823471799 898.51128993586 20.943 2 0.08042099960271726 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000069275|Q9H1E3-2|NUCKS1', 'ENSG00000069275|ENST00000367142|NUCKS1'] 28425 9557 FSEEGAVGY True H1975_Epitope_Rep2 957.4079768482898 957.4074249679301 41.735 1 0.08042031422266974 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 83842 9069 QEFVRALAA True NCI_RA007_Epitope_Rep4 1003.5450794577897 1003.5439899358599 41.716 2 0.08041082959648302 0.0035774856900572397 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 25291 16037 FEEDGLGVLP True H1975_Epitope_Rep2 1074.5233409536997 1074.52277496793 66.885 1 0.08040742271771326 0.0035774856900572397 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF'] 106339 9893 SVSDLFNTK True NCI_RA007_Epitope_Rep4 1009.50802524273 1009.50692993586 44.9 2 0.08040444367201564 0.0035774856900572397 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 76007 8587 NRITDASAL True PC9_epitope_Rep4 959.5036085686299 959.50250993586 40.51 2 0.08038189146117083 0.0035774856900572397 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 6671 8043 AQAPDLQRV True PC9_epitope_Rep2 996.5352430500799 996.53414993586 36.297 2 0.08036728391423545 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 7514 7687 ASENKYQIIY True H1975_Epitope_Rep2 1227.61355294043 1227.61244993586 34.52 2 0.08036322997204025 0.0036003600360036 0.9438714419765777 ['CNTN6|p.A388S|1|0.22|ENSG00000134115|chr3:1327535-1327535|G/T|missense_variant'] 1153 3753 AEAQPPSHPP True H1975_Epitope_Rep2 1029.48795850449 1029.48686993586 19.44 2 0.08036305410795615 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 140849 13951 YYTDIM[Oxidation]HTL True PC9_epitope_Rep4 1171.5219614351497 1171.5208699358602 61.565 2 0.08036301455353044 0.0036003600360036 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 86707 6564 QRIDSDDAL True PC9_epitope_Rep6 1031.4883524273098 1031.48724993586 33.943 2 0.08033833770579488 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 105161 5592 STMGYM[Oxidation]MAK True NCI_RA007_Epitope_Rep4 1034.42351034718 1034.42240993586 28.109 2 0.08033314749690494 0.0036003600360036 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000518337.1_1_8:74128289-74128592:-|nuORF'] 3078 9459 AGAGHFEVV True PC9_epitope_Rep4 885.43446637965 885.43336993586 43.993 2 0.08033131304280247 0.0036003600360036 0.9438714419765777 ['ENSG00000169018|ENST00000306917|FEM1B', 'FEM1B|p.C308Lfs*2|1|0.33|ENSG00000169018|chr15:68290279-68290280|-/T|frameshift_variant'] 91867 8703 RPNPPPVSV True PC9_epitope_Rep5 961.53451477409 961.53340993586 38.418 2 0.08030895861383869 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 29303 16707 FVDPNGKISL True PC9_epitope_Rep1 1088.5866099165999 1088.58550993586 69.091 2 0.08029658459879742 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 35345 5983 GSYSLEEPK True NCI_RA007_Epitope_Rep4 1008.4763907612798 1008.47528993586 29.634 2 0.08028705168546779 0.0036003600360036 0.9438714419765777 ['ENSG00000115884|ENST00000254351|SDC1'] 61134 7396 LLDEHHISY True H1975_Epitope_Rep3 1125.54547338061 1125.54382490379 33.427 3 0.0802863846972941 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 98073 14616 SHVIQDIAL True PC9_epitope_Rep4 994.5447451046199 994.54364993586 64.151 2 0.08028304956473285 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10'] 109640 12275 THDLEGPPL True PC9_epitope_Rep3 977.4818104948899 977.48070993586 52.242 2 0.08027902584336492 0.0036003600360036 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 77191 15790 NYGHVYAVF True PC9_epitope_Rep4 1068.5028802926397 1068.5017899358602 68.662 2 0.08027258659411775 0.0036003600360036 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 108251 3733 TEAPLNPK True NCI_RA007_Epitope_Rep4 868.4654321547599 868.46432993586 20.505 2 0.08026242635866637 0.0036003600360036 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 104975 22449 STIANVWLV True PC9_epitope_Rep5 1001.55458151233 1001.55348993586 91.35 2 0.0802620671202605 0.0036003600360036 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 103757 14934 SRFLANEVL True PC9_epitope_Rep6 1047.57129420563 1047.57018993586 69.442 2 0.08025580123749129 0.0036003600360036 0.9438714419765777 ['IPO7-WEE1|1|fusion', 'nc|ENSG00000166483|P30291-2|WEE1', 'ENSG00000166483|ENST00000450114|WEE1'] 95213 15421 SAAMVFSAL True NCI_RA007_Epitope_Rep3 895.4473395624699 895.44624993586 68.212 2 0.08024800583791514 0.0036003600360036 0.9438714419765777 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 90608 4429 RKKHLEDEL True NCI_RA007_Epitope_Rep2 1166.64077074778 1166.6391149037902 21.861 3 0.0802443945690265 0.0036003600360036 0.9438714419765777 ['ENSG00000117862|ENST00000371626|TXNDC12'] 77430 14692 NYNEKIYEL True PC9_epitope_Rep2 1184.5713537752797 1184.5702499358601 61.778 2 0.08022527000197346 0.0036003600360036 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 65755 22311 LSIEQLTTL True PC9_epitope_Rep5 1016.5753765265599 1016.57426993586 90.826 2 0.08021446710129465 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 33287 14225 GLATDVQTV True PC9_epitope_Rep1 902.47091145802 902.46980993586 59.541 2 0.08021196838443369 0.0036003600360036 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 77537 21500 NYQVQFVTL True PC9_epitope_Rep3 1110.57095985246 1110.5698699358602 87.993 2 0.08019653771038572 0.0036003600360036 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 89631 4545 RETGSIAAP True NCI_RA007_Epitope_Rep4 900.4664947839198 900.46538993586 23.884 2 0.08017234261197395 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000011258|Q05BQ5-3|MBTD1', 'MBTD1|p.P559Hfs*30|1|0.1|ENSG00000011258|chr17:51192790-51192796|GCTGGAG/-|frameshift_variant', 'ENSG00000011258|ENST00000586178|MBTD1'] 113284 11015 TQHAVGIVV True PC9_epitope_Rep1 922.5236157372199 922.52250993586 47.257 2 0.08017123334362224 0.0036003600360036 0.9438714419765777 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 8052 8711 ATDYPLIAR True NCI_RA007_Epitope_Rep4 1018.5447451046199 1018.54364993586 40.298 2 0.08015458013523066 0.0036003600360036 0.9438714419765777 ['ENSG00000101265|ENST00000379400|RASSF2'] 47464 23427 IYIWDLNNF True PC9_epitope_Rep2 1196.5866099165999 1196.58550993586 95.585 2 0.08015108628658978 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 57286 7149 LEGGQTPIA True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 32.433 2 0.08014064241881523 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 17283 10243 EHDGSLFQA True PC9_epitope_Rep4 1002.4406739589 1002.43956993586 47.08 2 0.0801397763896286 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 101113 21210 SLVELLNQI True PC9_epitope_Rep6 1027.5913609438699 1027.59026993586 94.433 2 0.08012234374223598 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 23955 19823 EYNSDLHQFF True PC9_epitope_Rep3 1298.5567663402996 1298.5556699358601 81.482 2 0.08010139370298569 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 39508 8146 HPDYNNEL True PC9_epitope_Rep1 1000.4250238947601 1000.42392993586 36.164 2 0.08009057146256623 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 83660 7106 QEAGSPPVV True H1975_Epitope_Rep3 882.4446967101799 882.44414496793 32.303 1 0.08008224332519776 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 6679 8701 AQAPDLQRV True PC9_epitope_Rep5 996.5352430500799 996.53414993586 38.41 2 0.08007692793796793 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 47742 13034 IYQKPFQTL True PC9_epitope_Rep4 1136.62299542532 1136.62188993586 58.028 2 0.08006099734370817 0.0036003600360036 0.9438714419765777 ['ATL2|p.K282Nfs*32|1|0.35|ENSG00000119787|chr2:38310406-38310406|C/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'nc|ENSG00000119787|Q8NHH9-3|ATL2'] 85284 5828 QKSLSLSPG True NCI_RA007_Epitope_Rep4 915.5025459394699 915.50199496793 29.041 1 0.08006047924039923 0.0036003600360036 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 107707 17026 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.57388993586 70.741 2 0.08005573446525742 0.0036003600360036 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 35793 7542 GTWNGTTKV True PC9_epitope_Rep1 962.48214484806 962.48104993586 33.828 2 0.08005103278181437 0.0036003600360036 0.9438714419765777 ['ENSG00000176105|ENST00000314574|YES1'] 33338 19298 GLDSQFVEV True PC9_epitope_Rep4 992.4814761417199 992.48036993586 82.335 2 0.08004383116866812 0.00361869040386698 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 6784 8731 AQFDADELR True NCI_RA007_Epitope_Rep1 1063.4934378077498 1063.4923499358601 37.963 2 0.08004353375618159 0.00361869040386698 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 85547 21399 QLLDLDPEV True PC9_epitope_Rep2 1040.5389910178399 1040.5378899358602 87.783 2 0.08003843933727736 0.00361869040386698 0.9438714419765777 ['ENSG00000113384|ENST00000265070|GOLPH3'] 104612 13852 SSVATVVYL True H1975_Epitope_Rep1 937.5120479940099 937.51149496793 58.43 1 0.08003551266931658 0.00361869040386698 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 103386 12310 SQVVQVVL True NCI_RA007_Epitope_Rep3 870.5174677276198 870.51636993586 55.597 2 0.08003526646074798 0.00361869040386698 0.9438714419765777 ['KPNA3|p.N437Kfs*8|1|0.2|ENSG00000102753|chr13:49705682-49705683|-/T|frameshift_variant', 'ENSG00000102753|ENST00000261667|KPNA3'] 129142 11041 VTDDALVY True H1975_Epitope_Rep2 894.4334633201399 894.4329149679301 47.499 1 0.08002516662117043 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 26035 21267 FHDHALMIIF True PC9_epitope_Rep3 1242.6219498795 1242.62029490379 87.097 3 0.08002516067119535 0.00361869040386698 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 113426 19720 TQNDIISTL True PC9_epitope_Rep1 1003.51858992643 1003.51807496793 80.68 1 0.08002345349158557 0.00361869040386698 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 9308 9930 AVSDGVIKV True PC9_epitope_Rep6 886.5123823471799 886.51128993586 48.713 2 0.0800172998728856 0.00361869040386698 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 7014 20019 AQQVILVQV True PC9_epitope_Rep3 996.5967806774798 996.59568993586 82.25 2 0.08000357882189958 0.00361869040386698 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF', 'nc|ENSG00000075420|Q53EP0-3|FNDC3B'] 123306 9463 VHSPPNVGL True PC9_epitope_Rep2 918.49231560894 918.49120993586 41.738 2 0.07999717508788771 0.00361869040386698 0.9438714419765777 ['ENSG00000146247|ENST00000275034|PHIP', 'PHIP|p.G744Efs*5|1|0.13|ENSG00000146247|chr6:78990956-78990956|C/-|frameshift_variant'] 99910 23051 SLIADLEQL True PC9_epitope_Rep3 1000.5440763982799 1000.54296993586 93.933 2 0.07999648009991032 0.00361869040386698 0.9438714419765777 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 125998 9462 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.4914349679301 44.004 1 0.07997233202963276 0.00361869040386698 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 75301 18516 NPTLILAA True PC9_epitope_Rep4 811.4803539429099 811.47980496793 79.295 1 0.07996294389995899 0.00361869040386698 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 99060 12253 SKVSILESL True NCI_RA007_Epitope_Rep4 974.56481184286 974.56370993586 54.128 2 0.07996259545254851 0.00361869040386698 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 26787 21753 FLDSTSPLL True PC9_epitope_Rep1 991.52261267771 991.5220649679301 88.507 1 0.07995946741438516 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 68741 16530 LVDLAPLGY True H1975_Epitope_Rep2 959.5327834385898 959.5322349679301 68.807 1 0.07995633803068702 0.00361869040386698 0.9438714419765777 ['DTX2|p.H232Tfs*122|1|0.12|ENSG00000091073|chr7:76482925-76482926|-/C|frameshift_variant', 'nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 104328 13041 SSEQTFMYY True H1975_Epitope_Rep1 1154.4590264449798 1154.4579299358602 55.248 2 0.07994404671178922 0.00361869040386698 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 95583 4763 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 25.767 2 0.07993677883958095 0.00361869040386698 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 135633 7411 YEERVQAVV True H1975_Epitope_Rep2 1091.56112344475 1091.56002993586 33.449 2 0.07993669851981502 0.00361869040386698 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 113640 15354 TRDDSPLYI True PC9_epitope_Rep3 1078.5294889632999 1078.52838993586 64.214 2 0.07992781314657146 0.00361869040386698 0.9438714419765777 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 57698 11541 LENEIQTY True PC9_epitope_Rep6 1008.4763907612798 1008.47528993586 55.483 2 0.07992431834181025 0.00361869040386698 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 120288 17127 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 70.9 2 0.0799199081503161 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 114895 17090 TTEFLYNLY True H1975_Epitope_Rep3 1162.5546410819798 1162.5540749679299 71.353 1 0.07991499432731593 0.00361869040386698 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF', 'ENST00000474114.5_1_21:45744937-45745285:+|nuORF', 'ENST00000495274.1_1_21:45742848-45745285:+|nuORF'] 106360 5699 SVSNVVITK True NCI_RA007_Epitope_Rep1 945.54949613189 945.54838993586 26.226 2 0.07991141517627837 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 5 6051 AAAAAAAAAAA True PC9_epitope_Rep3 799.41881631551 799.41770993586 28.326 2 0.07990603650071373 0.00361869040386698 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 9652 14656 AYGLVSATF True NCI_RA007_Epitope_Rep4 927.47018318203 927.46963496793 63.783 1 0.07990188582840879 0.00361869040386698 0.9438714419765777 ['ENSG00000156875|ENST00000370152|MFSD14A'] 101854 9190 SPKQILDPA True PC9_epitope_Rep3 967.5338460677499 967.53274993586 40.288 2 0.07989598457283784 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant'] 20976 18454 ERADLIAYL True PC9_epitope_Rep6 1062.57095985246 1062.5698699358602 83.625 2 0.07988524888619508 0.00361869040386698 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'ENST00000420810.1_1_Y:28695704-28695887:+|nuORF'] 6810 18890 AQGGVLPNI True PC9_epitope_Rep3 867.48141657207 867.48030993586 77.883 2 0.07988446254085335 0.00361869040386698 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC8|p.A114T|1|0.22|ENSG00000277075|chr6:26217314-26217314|G/A|missense_variant', 'H2AC4|p.Q113K|1|0.39|ENSG00000278463|chr6:26033232-26033232|G/T|missense_variant', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 1108 6469 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 29.799 2 0.0798805264817731 0.00361869040386698 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 69089 15564 LVKDVFISA True PC9_epitope_Rep2 990.57498260374 990.57388993586 65.14 2 0.0798771776124575 0.00361869040386698 0.9438714419765777 ['ENSG00000008018|ENST00000262193|PSMB1'] 54272 7054 KYPNVFKKI True NCI_RA007_Epitope_Rep4 1135.67536535135 1135.67371490379 33.757 3 0.07986215387671121 0.00361869040386698 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 9705 20730 AYILDTLVF True NCI_RA007_Epitope_Rep5 1053.57464825057 1053.57354993586 86.711 2 0.07985670826113686 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 127581 22092 VQYALPLQL True PC9_epitope_Rep2 1043.60153170475 1043.6004299358601 90.449 2 0.07982938621661823 0.00361869040386698 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant'] 118903 5195 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 25.055 2 0.07982354151336218 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 43418 16028 IHSEPLGVVL True PC9_epitope_Rep6 1062.60734536118 1062.6062499358602 73.977 2 0.07981269278677276 0.00361869040386698 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 9415 6774 AVVIVDDR True PC9_epitope_Rep6 885.4919812557699 885.49088993586 34.873 2 0.07981233217030699 0.00361869040386698 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 107085 16126 SYMEVPTYL True NCI_RA007_Epitope_Rep5 1101.50524836141 1101.5041499358601 68.761 2 0.07980970115463847 0.00361869040386698 0.9438714419765777 ['ENSG00000162511|ENST00000294507|LAPTM5'] 135622 4877 YEEPPQKPP True H1975_Epitope_Rep3 1083.5236753068698 1083.52256993586 23.885 2 0.0798021358293758 0.00361869040386698 0.9438714419765777 ['ENSG00000064999|ENST00000360359|ANKS1A'] 116357 19092 TVYEGFISA True PC9_epitope_Rep4 985.4756624852898 985.47456993586 81.528 2 0.07979595292781802 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 105810 23380 SVINFLDQL True PC9_epitope_Rep3 1047.5600608155898 1047.5589699358602 95.21 2 0.07979045836476648 0.00361869040386698 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 119649 8081 VESGVPQPP True H1975_Epitope_Rep2 908.4603467743198 908.45924993586 36.031 2 0.0797731375521652 0.00361869040386698 0.9438714419765777 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 25290 15922 FEEDGLGVLP True H1975_Epitope_Rep1 1074.5233409536997 1074.52277496793 66.555 1 0.07977035434477646 0.00361869040386698 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF'] 140811 13744 YYSPHGHILVL True PC9_epitope_Rep6 1297.68190728377 1297.68025490379 64.659 3 0.07976164707221953 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 140503 8125 YYINGKTGL True NCI_RA007_Epitope_Rep3 1027.53384606775 1027.53274993586 39.065 2 0.07976083056079206 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 62770 12622 LM[Oxidation]DHTIPEV True PC9_epitope_Rep3 1069.51139675145 1069.51028993586 53.573 2 0.07975708489450359 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 30917 18589 GASENIVIQV True PC9_epitope_Rep2 1028.5502244078798 1028.54912993586 76.854 2 0.07975608293237452 0.00361869040386698 0.9438714419765777 ['ENSG00000106804|ENST00000223642|C5'] 7672 4950 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep5 990.4618036426001 990.46070993586 24.078 2 0.07974525594284587 0.00361869040386698 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 140576 18317 YYLSKIEEL True PC9_epitope_Rep4 1156.6015912743999 1156.6004899358602 78.524 2 0.07974486705242656 0.00361869040386698 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5'] 133251 8027 WEEGATSQTVA True H1975_Epitope_Rep2 1177.52513185885 1177.5240299358602 35.823 2 0.07974329141909586 0.00361869040386698 0.9438714419765777 ['ENSG00000161036|ENST00000292616|LRWD1'] 103701 8283 SRDTTMYAV True PC9_epitope_Rep4 1042.47534521546 1042.4742499358601 39.321 2 0.07974237355384244 0.00361869040386698 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA'] 105476 16130 SVATELNAV True PC9_epitope_Rep1 902.4709114580199 902.46980993586 66.86 2 0.07973110663522998 0.00361869040386698 0.9438714419765777 ['ENSG00000003393|ENST00000264276|ALS2', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF', 'nc|ENSG00000003393|Q96Q42-2|ALS2', 'nc|ENSG00000003393|Q96Q42-3|ALS2', 'ENST00000482789.5_1_2:202606311-202633608:-|nuORF'] 43435 11206 IHSPVVNEL True PC9_epitope_Rep6 1006.54474510462 1006.54364993586 54.083 2 0.07972932461433217 0.00361869040386698 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 1008 6236 AEAEPPSEV True H1975_Epitope_Rep2 927.41854153199 927.41744993586 28.945 2 0.07972739084655182 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 96922 3957 SETSGIARP True NCI_RA007_Epitope_Rep3 916.4614094034799 916.46030993586 21.938 2 0.07972208293590068 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 73960 16719 NHM[Oxidation]AVAFVL True PC9_epitope_Rep2 1016.5113371818 1016.51022993586 69.559 2 0.07972010003525042 0.00361869040386698 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 87302 20159 QSVDLVFPV True PC9_epitope_Rep6 1002.5385970950199 1002.53750993586 90.214 2 0.07971118611689697 0.00361869040386698 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 40271 11930 HRNGGLITL True PC9_epitope_Rep1 979.55631284783 979.55520993586 50.753 2 0.07970924157614911 0.00361869040386698 0.9438714419765777 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 48196 7782 KAWSVARL True NCI_RA007_Epitope_Rep4 929.5446855349699 929.54358993586 36.614 2 0.07969908093767461 0.00361869040386698 0.9438714419765777 ['CON__P02769'] 94120 19826 RWFDKSFTF True PC9_epitope_Rep2 1232.59784330664 1232.5961849037901 81.65 3 0.07969332488695538 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 64199 12636 LQIDNARLA True PC9_epitope_Rep3 1012.5665431783599 1012.56544993586 53.627 2 0.07968615962658383 0.00361869040386698 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000520711.1_1_8:41368829-41369321:+|nuORF', 'ENST00000527480.1_1_11:6015523-6015940:-|nuORF', 'ENST00000425692.6_1_17:16723399-16724021:-|nuORF', 'ENST00000417510.5_1_17:16723399-16724042:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 40335 9001 HRSDVLETV True PC9_epitope_Rep5 1054.54072235334 1054.5396299358601 39.567 2 0.07968383296004193 0.00361869040386698 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 130454 15845 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.48982993586 68.871 2 0.07968313590612101 0.00361869040386698 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 115208 9144 TVAVPLVGK True NCI_RA007_Epitope_Rep2 882.5538532363399 882.55274993586 40.175 2 0.07965025180594486 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 117044 16485 TYQLGFHSI True PC9_epitope_Rep4 1064.52909504048 1064.5279899358602 71.38 2 0.07964770018002369 0.00361869040386698 0.9438714419765777 ['ENSG00000142507|ENST00000270586|PSMB6'] 75901 7508 NRDRTQIAL True PC9_epitope_Rep3 1085.59415490853 1085.59304993586 33.883 2 0.07964735120668574 0.00361869040386698 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 7673 5041 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep5 990.4618036426001 990.46070993586 24.42 2 0.07964708224822478 0.00361869040386698 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 1871 5542 AEIGEHVAP True H1975_Epitope_Rep2 921.45559574705 921.45448993586 26.325 2 0.07963879101999506 0.00361869040386698 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 76526 12891 NTDNLLTEY True H1975_Epitope_Rep2 1081.49276910141 1081.49217496793 54.698 1 0.0796318728483887 0.00361869040386698 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF'] 47517 15402 IYLPEVRKI True PC9_epitope_Rep1 1129.68593003505 1129.68427490379 64.063 3 0.0796258084499525 0.00361869040386698 0.9438714419765777 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 57103 8627 LEEMEAPAA True H1975_Epitope_Rep3 959.4269980407098 959.42590993586 38.177 2 0.07960892521469869 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 44142 16645 ILPKELQTW True PC9_epitope_Rep6 1126.6386454894598 1126.63754993586 76.492 2 0.07960184353246234 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 110115 8068 TIAPALVSK True PC9_epitope_Rep6 898.5487678559 898.54766993586 40.53 2 0.07959425108605858 0.00361869040386698 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 48030 18596 KALDGFVMV True PC9_epitope_Rep4 978.5208388558999 978.51974993586 79.606 2 0.07959122564364882 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 27740 11100 FQDRPVSSL True PC9_epitope_Rep1 1047.53490869691 1047.53380993586 47.583 2 0.07959118423387572 0.00361869040386698 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 8587 19642 AVAELNYGL True PC9_epitope_Rep2 948.4916469026 948.49109496793 80.938 1 0.07959034680213667 0.00361869040386698 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 7929 15575 ATDFDVLSY True H1975_Epitope_Rep1 1029.46549172441 1029.46497496793 65.19 1 0.07958901438381219 0.00361869040386698 0.9438714419765777 ['ENST00000463347.5_1_3:45730948-45748420:+|nuORF', 'ENST00000445499.2_1_3:45730957-45754662:+|nuORF', 'ENST00000463237.5_1_3:45730948-45754703:+|nuORF', 'ENSG00000211456|ENST00000389061|SACM1L'] 101628 16972 SPFGTITSA True PC9_epitope_Rep1 879.43379767331 879.43324496793 70.106 1 0.07958831660115688 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 32083 7787 GEYDHLPEQA True H1975_Epitope_Rep2 1157.4989171110099 1157.4978299358602 34.899 2 0.07958637122381056 0.00361869040386698 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 118930 6033 VEERITQVA True H1975_Epitope_Rep2 1043.56112344475 1043.56002993586 28.184 2 0.07958571600152851 0.00361869040386698 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 74682 15990 NLIGKIENV True PC9_epitope_Rep2 998.5760452328999 998.57494993586 66.758 2 0.07958498722542713 0.00361869040386698 0.9438714419765777 ['ENSG00000129295|ENST00000620350|DNAAF11', 'nc|ENSG00000129295|Q86X45-2|DNAAF11', 'ENST00000520446.5_1_8:133637625-133687739:-|nuORF'] 7257 8316 ARNTVTQVL True PC9_epitope_Rep4 1000.5665431783599 1000.56544993586 39.447 2 0.07958473516772947 0.00361869040386698 0.9438714419765777 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000607039.1_1_1:112999611-113005178:+|nuORF'] 12512 10189 DLAGSIIGK True H1975_Epitope_Rep3 872.4967322830399 872.49562993586 44.237 2 0.07958082279351074 0.00361869040386698 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 77434 14112 NYNEKIYEL True PC9_epitope_Rep4 1184.5713537752797 1184.5702499358601 62.187 2 0.07957792920407546 0.00361869040386698 0.9438714419765777 ['ENST00000466373.1_1_22:19439515-19452862:-|nuORF', 'nc|ENSG00000070010|Q92890-3|UFD1', 'ENST00000459854.5_1_22:19442175-19463025:-|nuORF', 'ENSG00000070010|ENST00000263202|UFD1', 'nc|ENSG00000070010|Q92890-1|UFD1'] 119146 12337 VEIPDPVEA True H1975_Epitope_Rep1 967.4862271689899 967.4856749679301 52.484 1 0.07956864447606815 0.003644430359689431 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 70099 15675 LYITEPKTI True PC9_epitope_Rep1 1076.61176203528 1076.6106699358602 65.116 2 0.07956436604140704 0.003644430359689431 0.9438714419765777 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 47769 11046 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65880490379 47.808 3 0.07955649624333425 0.003644430359689431 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 7940 17873 ATDFGEALV True PC9_epitope_Rep6 921.4443623570098 921.44326993586 81.375 2 0.07955093931074927 0.003644430359689431 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 106668 18695 SYAELGTTI True PC9_epitope_Rep1 953.47057710485 953.47002496793 76.701 1 0.07954599939158434 0.003644430359689431 0.9438714419765777 ['ENSG00000151012|ENST00000280612|SLC7A11'] 97621 18432 SHALVTLTL True PC9_epitope_Rep2 953.5545815123301 953.55348993586 76.23 2 0.07954344790256822 0.003644430359689431 0.9438714419765777 ['ENST00000531423.1_1_8:145696018-145698106:+|nuORF', 'ENSG00000167702|ENST00000645548|KIFC2', 'nc|ENSG00000167702|Q96AC6|KIFC2'] 21797 13807 ESDLDYIQY True H1975_Epitope_Rep3 1144.4924347482402 1144.49187496793 58.414 1 0.07954212792296003 0.003644430359689431 0.9438714419765777 ['ENST00000437036.6_1_17:57189640-57232487:-|nuORF', 'ENSG00000182628|ENST00000330137|SKA2', 'ENST00000583976.1_1_17:57189640-57232487:-|nuORF'] 42426 15900 IEQEGYWLP True H1975_Epitope_Rep2 1133.53932537101 1133.5387749679298 66.361 1 0.07952291025460356 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 17223 15983 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 66.469 2 0.07951749337993627 0.0036593392128471767 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 9732 15401 AYKPGALTF True PC9_epitope_Rep1 966.5174677276199 966.51636993586 64.059 2 0.07950005814093349 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 72050 15799 MRAFADAL True PC9_epitope_Rep3 893.4429228883698 893.44182993586 65.925 2 0.07949840229216501 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 15028 6945 EAAAAVVAAA True H1975_Epitope_Rep1 842.4497820906199 842.44923496793 31.754 1 0.0794829809085968 0.0036593392128471767 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000398654.7_1_18:44497289-44497409:-|nuORF'] 8730 10168 AVDPTSGQLY True H1975_Epitope_Rep1 1049.50293986229 1049.50184993586 44.051 2 0.07947809250304445 0.0036593392128471767 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210'] 47591 20310 IYNGETLVF True PC9_epitope_Rep4 1054.5335117145798 1054.5324099358602 86.265 2 0.07947739955215612 0.0036593392128471767 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 65581 12039 LSGHLETVIL True H1975_Epitope_Rep1 1080.61791004488 1080.6168099358601 51.319 2 0.07947603859277198 0.0036593392128471767 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 44080 20445 ILLPRIIEA True PC9_epitope_Rep3 1036.6644663144798 1036.6633699358601 83.897 2 0.07947470538977185 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 70932 15130 MELITPISA True H1975_Epitope_Rep3 973.5154191222899 973.51432993586 63.597 2 0.07946978862750227 0.0036593392128471767 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 32601 9913 GHDASQITL True PC9_epitope_Rep5 940.46140940348 940.46030993586 43.102 2 0.0794691599944734 0.0036593392128471767 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF'] 96722 11061 SEQFETVAV True H1975_Epitope_Rep1 1008.4763907612798 1008.47587496793 47.507 1 0.07946778726900519 0.0036593392128471767 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2', 'TGFBR2|p.K277E|1|0.47|ENSG00000163513|chr3:30672012-30672012|A/G|missense_variant'] 112135 15686 TLVEAIKQV True PC9_epitope_Rep1 999.5964463243098 999.59534993586 65.158 2 0.07946065045929651 0.0036593392128471767 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'MOV10|p.V542A|1|0.11|ENSG00000155363|chr1:112695420-112695420|T/C|missense_variant', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 30320 11933 GADHTQAIVL True PC9_epitope_Rep2 1023.53490869691 1023.53380993586 51.222 2 0.07944097685113188 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000139626|P26010-2|ITGB7', 'ENSG00000139626|ENST00000267082|ITGB7'] 1119 5693 AEAPPPPPP True H1975_Epitope_Rep3 871.44396843419 871.44286993586 26.928 2 0.07943529594424022 0.0036593392128471767 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 116911 14864 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47054993586 62.311 2 0.07943413532604893 0.0036593392128471767 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 72250 17812 M[Oxidation]RYVASYLL True PC9_epitope_Rep2 1130.5794167416198 1130.57830993586 73.806 2 0.07942972713339409 0.0036593392128471767 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 44806 2559 IPVEQKEGA True PC9_epitope_Rep4 969.5131106231698 969.51200993586 14.754 2 0.07942627240347351 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 29289 20762 FVDPAQITM True PC9_epitope_Rep1 1020.49501803088 1020.49447496793 84.689 1 0.0794168296141439 0.0036593392128471767 0.9438714419765777 ['ENSG00000167325|ENST00000300738|RRM1'] 38893 18241 HIIGGVIAV True PC9_epitope_Rep5 877.53853752537 877.53744993586 75.178 2 0.07941578926671299 0.0036593392128471767 0.9438714419765777 ['ENST00000550528.5_1_12:58133675-58140075:+|nuORF', 'ENST00000546993.5_1_12:58138937-58140584:+|nuORF', 'ENSG00000135452|ENST00000257910|TSPAN31'] 94425 16295 RYFENPQVI True PC9_epitope_Rep5 1164.5927579262 1164.5916699358602 67.672 2 0.07941246584880213 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 130887 13390 VVHDGFEGL True PC9_epitope_Rep2 971.47124581119 971.47014993586 56.785 2 0.07940548209444068 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 26246 16951 FHYNGTDVSF True PC9_epitope_Rep4 1185.50908787189 1185.50798993586 73.192 2 0.07939981422544927 0.0036593392128471767 0.9438714419765777 ['ENSG00000176624|ENST00000406189|MEX3C'] 88953 5308 REDKPPLAV True H1975_Epitope_Rep2 1023.5712942056298 1023.57018993586 25.468 2 0.07939785949611794 0.0036593392128471767 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1', 'ENST00000512807.1_1_3:129278266-129279214:-|nuORF'] 29656 11014 FVMEVEVDGQK True NCI_RA007_Epitope_Rep1 1279.6118386882697 1279.6107499358602 46.837 2 0.0793967701472675 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 10939 3613 DAVTYTEHAK True NCI_RA007_Epitope_Rep5 1133.53530261973 1133.5342099358602 19.859 2 0.07938160298743521 0.0036593392128471767 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 113174 17257 TQDGNIYQL True PC9_epitope_Rep5 1050.4981888350198 1050.49767496793 71.391 1 0.07937953427937877 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 77265 9424 NYIPVKNGKQF True PC9_epitope_Rep1 1306.70337100434 1306.70173490379 41.108 3 0.07936233881798936 0.0036593392128471767 0.9438714419765777 ['ENSG00000095951|ENST00000379388|HIVEP1', 'HIVEP1|p.E539Kfs*3|1|0.36|ENSG00000095951|chr6:12121410-12121410|G/-|frameshift_variant'] 23784 11297 EYKNTNEMF True PC9_epitope_Rep5 1174.49647458286 1174.49536993586 48.447 2 0.07935739388912773 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 9385 14176 AVVESMVTA True PC9_epitope_Rep2 905.4528188657299 905.45172993586 59.795 2 0.0793553570814953 0.0036593392128471767 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 26472 19749 FIPPDGNFRL True PC9_epitope_Rep5 1174.61349337078 1174.6123899358602 81.009 2 0.07934798847547403 0.0036593392128471767 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 39848 9437 HQGPATTVAF True PC9_epitope_Rep4 1027.50869394907 1027.50758993586 43.911 2 0.07934766782032586 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000164087|Q8NBT0-2|POC1A', 'nc|ENSG00000164087|Q8NBT0-3|POC1A', 'ENSG00000164087|ENST00000296484|POC1A'] 76623 22454 NTIDILTAI True PC9_epitope_Rep2 972.54916177872 972.54861496793 91.859 1 0.07934550161918325 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'DNM1L|p.G587Efs*12|1|0.19|ENSG00000087470|chr12:32740116-32740117|GC/-|frameshift_variant'] 102062 7143 SPPPPPPPP True PC9_epitope_Rep6 881.4647038787699 881.46360993586 36.545 2 0.07933604462427064 0.0036593392128471767 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 4074 10644 AHSEPLAL True PC9_epitope_Rep5 836.43921740692 836.43812993586 45.929 2 0.07931841312960447 0.0036593392128471767 0.9438714419765777 ['ENSG00000132017|ENST00000254337|DCAF15'] 30101 18586 FYPPHPDYTW True PC9_epitope_Rep4 1321.5767735088898 1321.57566993586 79.567 2 0.07931640816309969 0.0036593392128471767 0.9438714419765777 ['ENSG00000130309|ENST00000252599|COLGALT1'] 8843 9274 AVFPSIVGRPR True NCI_RA007_Epitope_Rep1 1197.69822605425 1197.6965849037902 40.071 3 0.07930655706374792 0.0036593392128471767 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 43428 11798 IHSPVVNEL True PC9_epitope_Rep4 1006.54474510462 1006.54364993586 53.15 2 0.07930400973520114 0.0036593392128471767 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF'] 94948 20675 RYPQSIFSTF True PC9_epitope_Rep5 1244.6189726740397 1244.6178699358602 84.581 2 0.07930354626506614 0.0036593392128471767 0.9438714419765777 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2'] 86926 9580 QRSDGPYAL True PC9_epitope_Rep5 1005.4879585044899 1005.48686993586 41.811 2 0.07929592244497856 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 31368 4919 GEAPPSAPP True H1975_Epitope_Rep2 821.3919328613299 821.39082993586 24.003 2 0.0792884498164807 0.0036593392128471767 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 2629 7580 AESPGVPVA True H1975_Epitope_Rep3 825.4232329896099 825.42212993586 34.137 2 0.07928631704787155 0.0036593392128471767 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 45132 9072 IQVTKVTQV True PC9_epitope_Rep4 1014.6073453611799 1014.60624993586 42.479 2 0.07928518120602328 0.0036593392128471767 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 52345 11757 KPFGQVIST True PC9_epitope_Rep3 975.5389314481899 975.53782993586 50.244 2 0.07927820646565559 0.0036593392128471767 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 72067 17647 MRASSFLIV True PC9_epitope_Rep6 1022.5582869937799 1022.55718993586 80.518 2 0.07927676607191898 0.0036593392128471767 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 106073 18379 SVLVSVSEV True PC9_epitope_Rep4 917.50696261357 917.50586993586 78.761 2 0.07927035163558582 0.0036593392128471767 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 67142 16330 LTDEAFEFY True H1975_Epitope_Rep3 1133.49170647225 1133.49117496793 68.287 1 0.07925842088852592 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 84606 5075 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 24.895 2 0.07924574052662925 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 70393 19151 LYQFNPAFF True NCI_RA007_Epitope_Rep5 1145.5545815123298 1145.5534899358602 80.535 2 0.07923455327165234 0.0036593392128471767 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 86825 14151 QRPPTIVL True PC9_epitope_Rep3 922.5600012459399 922.55890993586 59.515 2 0.07922579904817224 0.0036593392128471767 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 88780 8827 RDLVAIEA True NCI_RA007_Epitope_Rep4 885.4919812557699 885.49088993586 40.764 2 0.07921289070674795 0.0036593392128471767 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 85432 5052 QLETLGQEK True NCI_RA007_Epitope_Rep5 1044.5451390274397 1044.5440499358601 26.132 2 0.0792061281286787 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000515599.1_1_5:146086275-146086944:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 30442 10607 GAGAPVYLAA True H1975_Epitope_Rep1 888.4705175351999 888.4699649679301 45.754 1 0.07919579912073993 0.0036593392128471767 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 38823 5942 HIDVGGHM[Oxidation]Y True H1975_Epitope_Rep2 1043.44946520123 1043.44836993586 27.838 2 0.07919413366129228 0.0036593392128471767 0.9438714419765777 ['ENSG00000134504|ENST00000580059|KCTD1', 'ENST00000592210.1_1_19:34291359-34292248:+|nuORF', 'nc|ENSG00000153885|Q96SI1-2|KCTD15', 'nc|ENSG00000134504|Q719H9|KCTD1', 'ENSG00000153885|ENST00000683859|KCTD15'] 37281 5385 GVVPFSQRK True NCI_RA007_Epitope_Rep4 1016.5767139392398 1016.57560993586 27.28 2 0.07918250720416449 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 75684 16436 NQTPVTLQV True PC9_epitope_Rep5 998.5396597241801 998.53856993586 68.219 2 0.0791818320879529 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 71849 17696 MPFGNVVSA True PC9_epitope_Rep6 920.4425885351999 920.44148993586 80.703 2 0.0791810526582348 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 31813 9755 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43153496793 42.511 1 0.07917949713688874 0.0036593392128471767 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 38555 9579 HHFEGAQIL True PC9_epitope_Rep6 1050.5246783663797 1050.5235899358602 47.147 2 0.07916941537483493 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 60472 16489 LILSPTREL True PC9_epitope_Rep1 1040.62299542532 1040.62188993586 68.25 2 0.07916613982769977 0.0036593392128471767 0.9438714419765777 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54', 'ENSG00000088205|ENST00000263239|DDX18'] 46657 20909 ITVGSLVTV True PC9_epitope_Rep1 887.5327834385901 887.5322349679301 85.247 1 0.07916568592160063 0.0036593392128471767 0.9438714419765777 ['ENSG00000025796|ENST00000369002|SEC63', 'ENST00000425785.1_1_1:98011504-98011909:+|nuORF'] 59433 14052 LGLTNQPEL True PC9_epitope_Rep4 983.52876068731 983.52766993586 61.961 2 0.0791618589397303 0.0036593392128471767 0.9438714419765777 ['ENSG00000179626|ENST00000641569|OR6C4'] 25601 10680 FETEFNTQP True H1975_Epitope_Rep1 1111.48220441771 1111.48110993586 46.04 2 0.07916028532213301 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 113387 17864 TQLGPPYHIL True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 76.753 2 0.07914937317446617 0.0036593392128471767 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 77176 21852 NYGDYFNVF True PC9_epitope_Rep4 1137.47672511445 1137.4761749679299 92.256 1 0.07914742155804726 0.0036593392128471767 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 91804 17555 RPLLPVPAV True PC9_epitope_Rep6 960.6120368187999 960.61092993586 80.165 2 0.0791442889504528 0.0036593392128471767 0.9438714419765777 ['DHTKD1|p.P894L|1|0.23|ENSG00000181192|chr10:12120809-12120809|C/T|missense_variant'] 132509 7018 VYPERSTSY True PC9_epitope_Rep5 1100.51383889916 1100.51274993586 31.964 2 0.07914175342491994 0.0036593392128471767 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 43271 12168 IHDGM[Oxidation]NLEL True PC9_epitope_Rep5 1056.49099566004 1056.4898899358602 51.794 2 0.07914067093408157 0.0036593392128471767 0.9438714419765777 ['ENSG00000198258|ENST00000586895|UBL5'] 40334 8131 HRSDALQL True PC9_epitope_Rep5 938.4933782380999 938.49228993586 36.215 2 0.07913423642056164 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000122861|P00749-2|PLAU', 'ENSG00000122861|ENST00000372764|PLAU'] 13896 15276 DRDPEFYKF True PC9_epitope_Rep1 1215.5560380643099 1215.55438490379 63.58 3 0.07912582153462816 0.0036593392128471767 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 94934 10866 RYPDSHQLF True PC9_epitope_Rep2 1161.55670677065 1161.5550749037902 47.113 3 0.07912485818342332 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 7142 10263 AQYENPPHI True PC9_epitope_Rep5 1067.50360856863 1067.5025099358602 44.463 2 0.07911907894144068 0.0036593392128471767 0.9438714419765777 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'MYO1F|p.A217Pfs*12|1|0.18|ENSG00000142347|chr19:8551862-8551862|C/-|frameshift_variant', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000594774.5_1_19:8618146-8642307:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 23640 21537 EYGFYHDFF True PC9_epitope_Rep5 1223.4923751785898 1223.4912699358601 87.878 2 0.07911707429236928 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000143374|Q9BW92-2|TARS2', 'ENSG00000143374|ENST00000369064|TARS2'] 139653 4990 YTSGPGSRISS True PC9_epitope_Rep5 1110.53055159246 1110.5294499358602 24.226 2 0.07911661099491668 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF'] 124637 20877 VLIENVASL True PC9_epitope_Rep1 956.5542471591599 956.55314993586 85.123 2 0.07910941586279222 0.0036593392128471767 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2'] 42347 10362 IELPHTVDC True H1975_Epitope_Rep2 1025.48518162317 1025.48408993586 44.866 2 0.07910830132846233 0.0036593392128471767 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 116229 21138 TVTTVILEV True PC9_epitope_Rep3 973.5695628701299 973.56846993586 86.592 2 0.07909076863405076 0.0036593392128471767 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 36845 14089 GVPTKVFNV True PC9_epitope_Rep2 959.5440168286299 959.54290993586 59.467 2 0.07908860141548829 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3'] 92083 9012 RPSSQYIVA True PC9_epitope_Rep3 1019.53999407735 1019.53888993586 39.609 2 0.07907732926938747 0.0036593392128471767 0.9438714419765777 ['ENSG00000103257|ENST00000261622|SLC7A5', 'ENST00000437413.2_1_16:21498935-21531497:-|nuORF', 'nc|ENSG00000260727|Q8MH63|SLC7A5P1', 'nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2', 'nc|ENSG00000258186|Q9GIP4|SLC7A5P2', 'ENST00000522841.6_1_16:21495824-21531728:-|nuORF'] 5642 14042 APAGIPAVA True PC9_epitope_Rep5 765.43848913093 765.43738993586 59.028 2 0.07907295419463473 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 23218 7846 EVQLVESG True NCI_RA007_Epitope_Rep4 859.4287122928699 859.42816496793 36.88 1 0.07907131472293377 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D', 'nc|ENSG00000211958|A0A0C4DH36|IGHV3-38', 'nc|ENSG00000211944|A0A0C4DH30|IGHV3-16', 'nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74', 'nc|ENSG00000211942|P01766|IGHV3-13', 'nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73', 'nc|ENSG00000223648|A0A075B6Q5|IGHV3-64', 'nc|ENSG00000211957|A0A0C4DH35|IGHV3-35', 'nc|ENSG00000211938|P01780|IGHV3-7'] 103900 10062 SRLTKVEEL True PC9_epitope_Rep3 1073.60807363717 1073.6069699358602 43.659 2 0.07906987843682692 0.0036593392128471767 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1'] 23067 17446 EVLDSFLDLAR True NCI_RA007_Epitope_Rep2 1276.66631678928 1276.66520993586 72.597 2 0.07904295799378172 0.0036593392128471767 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 89600 5241 RESPFSTSA True NCI_RA007_Epitope_Rep3 980.45632402304 980.45522993586 27.62 2 0.07902895518071676 0.0036593392128471767 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 102557 11759 SQANIAQVL True NCI_RA007_Epitope_Rep4 942.5134449763399 942.51234993586 52.203 2 0.07902606624658884 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 88990 3356 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 17.709 2 0.07902504186317287 0.0036593392128471767 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 88976 3725 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 19.324 2 0.07902486485608147 0.0036593392128471767 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 22788 8043 EVDIYTVK True H1975_Epitope_Rep3 965.50696261357 965.50586993586 35.911 2 0.07901543261899852 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000126457|Q99873-5|PRMT1', 'nc|ENSG00000126457|Q99873-2|PRMT1', 'nc|ENSG00000126457|Q99873-3|PRMT1', 'ENSG00000126457|ENST00000454376|PRMT1', 'PRMT8|p.E343Kfs*18|1|0.21|ENSG00000111218|chr12:3592277-3592277|G/-|frameshift_variant', 'ENST00000530361.5_1_19:50188842-50191499:+|nuORF', 'nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8'] 18050 12292 EIIRQLNGV True PC9_epitope_Rep4 1040.59784330664 1040.59674993586 55.096 2 0.07900332804644819 0.0036593392128471767 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 1935 8864 AEIPEEHIP True H1975_Epitope_Rep2 1033.50802524273 1033.5069299358602 39.064 2 0.07899959145221587 0.0036593392128471767 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 6013 9007 APLLQPRAA True PC9_epitope_Rep5 935.5552502186699 935.55414993586 39.591 2 0.07899103730547999 0.0036593392128471767 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 47664 20863 IYPPLLGALSF True NCI_RA007_Epitope_Rep3 1189.6746966450098 1189.67358993586 90.841 2 0.07898982937029607 0.0036593392128471767 0.9438714419765777 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 27786 21910 FQEGDIILV True PC9_epitope_Rep1 1032.5491617787197 1032.5485749679299 89.092 1 0.07897472410574705 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 1359 7129 AEEEAAVVAA True H1975_Epitope_Rep2 958.4607406971397 958.4601949679301 32.354 1 0.07896094903052742 0.0036593392128471767 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 34440 16561 GQAFVIFK True PC9_epitope_Rep2 908.5119884243599 908.51088993586 68.94 2 0.07895259202515202 0.0036593392128471767 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 120797 16720 VGDAIPAVEVF True H1975_Epitope_Rep3 1115.58627556343 1115.5851699358602 69.84 2 0.07895238599306342 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5'] 120439 7949 VFTSRSAAF True NCI_RA007_Epitope_Rep4 984.5028802926398 984.50178993586 37.322 2 0.07894919557475812 0.0036593392128471767 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 17622 9462 EHNIFHNEV True PC9_epitope_Rep1 1137.5203212619301 1137.51868490379 41.251 3 0.07894379764757514 0.0036593392128471767 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 88375 8738 QYNPKFQTL True NCI_RA007_Epitope_Rep4 1137.58185888933 1137.5807699358602 40.404 2 0.07894082140419374 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 35564 14093 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.51670993586 62.116 2 0.07892992278654527 0.0036593392128471767 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 25873 6420 FGHGAEDSL True NCI_RA007_Epitope_Rep4 931.40356017419 931.40246993586 31.295 2 0.0789292403685898 0.0036593392128471767 0.9438714419765777 ['ENSG00000173432|ENST00000356524|SAA1'] 52031 19143 KLGDFGLATV True PC9_epitope_Rep2 1019.5651461960299 1019.56404993586 79.005 2 0.07892370731555447 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 17603 20632 EHLTMLQVL True PC9_epitope_Rep1 1082.57941636118 1082.57830993586 84.181 2 0.07891665219218497 0.0036593392128471767 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 98853 23782 SIVDFLITA True PC9_epitope_Rep1 977.5433481222899 977.54279496793 96.273 1 0.07891528781990079 0.0036593392128471767 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L'] 32610 11983 GHFAEVQVV True PC9_epitope_Rep4 984.5028802926399 984.50178993586 53.886 2 0.07891301558003808 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 34841 8782 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 39.134 2 0.0789081967154363 0.0036593392128471767 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 23722 23454 EYINFLENL True PC9_epitope_Rep1 1153.5655401188499 1153.56444993586 95.0 2 0.07890337620121883 0.0036593392128471767 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 8225 21643 ATIFDLSEV True PC9_epitope_Rep4 993.5018772331299 993.50132496793 91.441 1 0.07889930101223457 0.0036593392128471767 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 6276 8108 APRPTIINA True PC9_epitope_Rep4 951.5501648382299 951.54906993586 38.64 2 0.0788981986399078 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 123526 15427 VIIDDHPEVTV True PC9_epitope_Rep4 1235.63976768827 1235.6386699358602 67.27 2 0.07888105146431522 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 102569 17394 SQANIAQVL True PC9_epitope_Rep2 942.5134449763399 942.51289496793 72.166 1 0.07887907221596858 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 123689 7081 VIPELNGK True NCI_RA007_Epitope_Rep2 868.50181766348 868.50072993586 32.168 2 0.07887275039752051 0.0036593392128471767 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 102122 7101 SPQQPGLSA True PC9_epitope_Rep4 883.4399456829099 883.43884993586 34.58 2 0.07886505994219234 0.0036593392128471767 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 7325 9598 ARSPTNSLL True PC9_epitope_Rep5 957.52434401321 957.52324993586 41.881 2 0.07885866346203052 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000183864|Q14106-2|TOB2', 'ENSG00000183864|ENST00000327492|TOB2'] 46719 10431 IVAEEFLK True H1975_Epitope_Rep3 947.5327834385898 947.53168993586 45.182 2 0.07885189327110598 0.0036593392128471767 0.9438714419765777 ['ENSG00000241553|ENST00000397261|ARPC4', 'ENST00000467289.5_1_3:9834805-9845712:+|nuORF', 'nc|ENSG00000241553|P59998-3|ARPC4', 'ENST00000440787.5_1_3:9845376-9847896:+|nuORF', 'nc|ENSG00000241553|P59998-4|ARPC4'] 72199 10111 MRSDTPAML True PC9_epitope_Rep4 1020.47323704048 1020.47212993586 46.562 2 0.07883356126397532 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 102489 6959 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 34.005 2 0.07883213523552511 0.0036593392128471767 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 6842 18215 AQIEDLQVKL True PC9_epitope_Rep2 1155.6499384491499 1155.6488499358602 75.381 2 0.07882303545717646 0.0036593392128471767 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 11810 18386 DHLLSVSL True PC9_epitope_Rep4 882.4810822189 882.48053496793 78.787 1 0.0788224155284668 0.0036593392128471767 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 31604 9388 GEGDLSISA True H1975_Epitope_Rep2 847.39232678415 847.39177496793 41.073 1 0.07881600053535015 0.0036711682181722826 0.9438714419765777 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1', 'ENST00000526890.5_1_11:3039642-3048038:-|nuORF'] 114881 10203 TTDVDSLSY True H1975_Epitope_Rep2 999.43967089939 999.4390749679301 44.251 1 0.07881289520008827 0.0036711682181722826 0.9438714419765777 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000490583.5_1_22:20040979-20049207:+|nuORF', 'ENST00000485715.2_1_22:20024321-20049197:+|nuORF', 'ENST00000484373.5_1_22:20024321-20041279:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-3|TANGO2', 'nc|ENSG00000183597|Q6ICL3-4|TANGO2', 'nc|ENSG00000183597|Q6ICL3-6|TANGO2'] 96912 6489 SETKIFTA True NCI_RA007_Epitope_Rep3 895.4650978015899 895.46400993586 32.554 2 0.07881032447092089 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 96291 7777 SEETPAISP True H1975_Epitope_Rep1 929.4341915961298 929.43308993586 34.868 2 0.07880547416853674 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 11777 9886 DHIKDSFHSL True PC9_epitope_Rep1 1197.57783613805 1197.57619490379 42.884 3 0.07877991867386068 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 7518 13045 ASETGFLTY True H1975_Epitope_Rep1 987.4549270407099 987.4543749679301 55.263 1 0.07877744650837347 0.0036711682181722826 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 1099 6156 AEAPPGVET True H1975_Epitope_Rep2 869.41306222873 869.4125149679301 28.651 1 0.07877514688199251 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 71467 19544 MKFNPFVTSD True PC9_epitope_Rep3 1184.5535955361597 1184.5524899358602 80.409 2 0.07876947603247607 0.0036711682181722826 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 97000 5771 SEVPEQPSA True NCI_RA007_Epitope_Rep5 942.4294405688601 942.42834993586 28.886 2 0.07875727951649823 0.0036711682181722826 0.9438714419765777 ['ENSG00000184557|ENST00000330871|SOCS3'] 20978 17944 ERADPLFL True PC9_epitope_Rep2 959.5076313199099 959.50652993586 74.326 2 0.07875636549473285 0.0036711682181722826 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 108281 4472 TEAVPRAPA True H1975_Epitope_Rep2 910.4872302284998 910.48612993586 22.314 2 0.0787450772154468 0.0036711682181722826 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 68106 8210 LTPEELER True PC9_epitope_Rep2 985.5080252427299 985.50692993586 36.938 2 0.07874354714354648 0.0036711682181722826 0.9438714419765777 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 86358 13626 QQLEPVTGQV True PC9_epitope_Rep2 1097.57168812845 1097.5705899358602 57.704 2 0.07873438296700312 0.0036711682181722826 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 103704 11914 SRDVKQMLL True PC9_epitope_Rep3 1088.60121443492 1088.60010993586 50.847 2 0.07871460225384731 0.0036711682181722826 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 118631 4473 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 22.318 2 0.07871367095873158 0.0036711682181722826 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 23006 14996 EVISKLYAV True PC9_epitope_Rep4 1020.5855472874398 1020.58444993586 65.621 2 0.07870355865601146 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 136964 7019 YKKFYEAFSK True NCI_RA007_Epitope_Rep5 1309.6706738937298 1309.66903490379 33.678 3 0.07869941539988169 0.0036711682181722826 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 297 9008 AAHLLNDAL True NCI_RA007_Epitope_Rep3 936.50288029264 936.50178993586 42.529 2 0.07869230007083815 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'ENST00000467906.5_1_6:43030654-43039600:+|nuORF', 'nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 72457 23528 MTVDDLLSL True PC9_epitope_Rep1 1005.5052483614099 1005.50414993586 95.289 2 0.07868326802241316 0.0036711682181722826 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 140116 20101 YVPPELITL True PC9_epitope_Rep6 1043.59029831471 1043.58920993586 89.994 2 0.07867564506653141 0.0036711682181722826 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 23677 23810 EYGSIIAFF True PC9_epitope_Rep5 1045.51204799401 1045.5114749679299 96.566 1 0.07866868359076228 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 14077 13388 DSDMQTLVY True H1975_Epitope_Rep2 1070.45902644498 1070.45847496793 56.631 1 0.07865844683993603 0.0036711682181722826 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 8160 9767 ATFTGILGK True NCI_RA007_Epitope_Rep3 906.5174677276199 906.51636993586 45.486 2 0.07865153889754327 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000167995|O76090-3|BEST1', 'ENST00000534553.5_1_11:61722629-61730618:+|nuORF'] 138873 14573 YSDPSVVFV True H1975_Epitope_Rep1 1011.49131254943 1011.4907749679301 61.26 1 0.07865032297469064 0.0036711682181722826 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF'] 1142 5101 AEAPQLRPA True H1975_Epitope_Rep3 951.5137793295099 951.51268993586 24.732 2 0.07863706712863501 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 28355 10341 FSDGRVLCY True H1975_Epitope_Rep2 1058.48551597634 1058.4844099358602 44.785 2 0.0786349464170838 0.0036711682181722826 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 67484 14484 LTEIMSMGY True H1975_Epitope_Rep1 1043.46675467771 1043.4661749679299 60.913 1 0.07862636605457625 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A', 'ENST00000588329.5_1_19:13056723-13059660:+|nuORF', 'nc|ENSG00000179262|P54725-2|RAD23A'] 17169 15637 EHAEALLL True PC9_epitope_Rep5 894.4810822188999 894.48053496793 65.158 1 0.07862052935850919 0.0036711682181722826 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 8322 6574 ATLNSIVAK True NCI_RA007_Epitope_Rep5 915.5389314481899 915.53782993586 31.949 2 0.07861853742878465 0.0036711682181722826 0.9438714419765777 ['ENSG00000007944|ENST00000356840|MYLIP'] 95521 8407 SAQGKPLAL True PC9_epitope_Rep5 883.5127167003499 883.51160993586 37.278 2 0.07861717996134553 0.0036711682181722826 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 139597 7370 YTQKSLSLSPG True NCI_RA007_Epitope_Rep4 1179.6135529404298 1179.61244993586 34.989 2 0.07861621085560551 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1'] 96942 15028 SEVEIAWPA True H1975_Epitope_Rep2 1000.4865615221598 1000.48546993586 62.958 2 0.07860869967492823 0.0036711682181722826 0.9438714419765777 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 48524 11672 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52766993586 51.857 2 0.07860801915505561 0.0036711682181722826 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 119783 9219 VEVDAAVTP True H1975_Epitope_Rep2 899.4600124211499 899.45890993586 40.415 2 0.07860234356911555 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 9301 11687 AVSDGVIKV True PC9_epitope_Rep1 886.5123823471799 886.51128993586 49.83 2 0.07860195957964354 0.0036711682181722826 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 135496 6100 YEDIRVSRV True H1975_Epitope_Rep2 1135.59857158263 1135.59691490379 28.44 3 0.07859941475123855 0.0036711682181722826 0.9438714419765777 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 32052 6201 GEVPESPEA True H1975_Epitope_Rep2 913.4028914678499 913.40234496793 28.824 1 0.07859863431998078 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 120511 13586 VFYPNSNKF True PC9_epitope_Rep5 1114.54474510462 1114.54364993586 57.281 2 0.07859539758657959 0.0036711682181722826 0.9438714419765777 ['ENSG00000160345|ENST00000429260|PIERCE1'] 87355 8028 QTDGTLTY True H1975_Epitope_Rep2 897.40797684829 897.4074249679301 35.828 1 0.07859262823730499 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C'] 97442 11617 SGGPVVVL True H1975_Epitope_Rep2 726.42759009406 726.4270449679301 49.752 1 0.07859234632743685 0.0036711682181722826 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 17204 15448 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 64.698 2 0.07858837377390991 0.0036711682181722826 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 90948 7258 RLFVGSIPK True NCI_RA007_Epitope_Rep3 1015.6178504752298 1015.61674993586 35.66 2 0.07858240717109592 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP', 'ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 110368 23533 TILPAIILV True PC9_epitope_Rep2 951.63685458431 951.6363049679301 95.994 1 0.07858002430871347 0.0036711682181722826 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 76252 17095 NSDLNNLLF True H1975_Epitope_Rep2 1048.5189242796 1048.51837496793 71.03 1 0.07857492720657497 0.0036711682181722826 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 112577 11097 TPAPHSPWTA True PC9_epitope_Rep5 1063.50869394907 1063.50758993586 47.673 2 0.0785584428449842 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 21969 15190 ESLQEEIAFLK True NCI_RA007_Epitope_Rep1 1305.6816325002499 1305.68052993586 63.156 2 0.07855609862626785 0.0036711682181722826 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 2375 10939 AEQFSSLTP True H1975_Epitope_Rep1 978.4658260775799 978.46472993586 47.04 2 0.078541080201716 0.0036711682181722826 0.9438714419765777 ['ENST00000366535.3_1_1:244615028-244615205:-|nuORF'] 38737 5539 HHTTQQTFL True PC9_epitope_Rep2 1111.54105670651 1111.53994993586 26.697 2 0.07853878756389701 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 48159 7369 KASAVYQAL True NCI_RA007_Epitope_Rep4 949.5232813840499 949.52218993586 34.985 2 0.07852418182813344 0.0036711682181722826 0.9438714419765777 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 101989 8889 SPNMANTVNA True PC9_epitope_Rep3 1017.45494412405 1017.45384993586 39.141 2 0.07851508671040115 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 95990 8489 SEAEKVYIV True H1975_Epitope_Rep3 1036.5440763982797 1036.5429699358601 37.638 2 0.07851469363790185 0.0036711682181722826 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7'] 63648 7601 LPNNVKTAV True PC9_epitope_Rep1 954.5498304850599 954.54872993586 34.059 2 0.07851203295354145 0.0036711682181722826 0.9438714419765777 ['ENSG00000261456|ENST00000568584|TUBB8'] 52797 12443 KQTALVELLK True PC9_epitope_Rep4 1141.7070594024499 1141.7059699358601 55.67 2 0.07851023105885602 0.0036711682181722826 0.9438714419765777 ['CON__P02769'] 117047 20010 TYQQLFYLL True NCI_RA007_Epitope_Rep3 1187.6226610721499 1187.6215699358602 87.204 2 0.07847864468536801 0.0036711682181722826 0.9438714419765777 ['ENSG00000145703|ENST00000274364|IQGAP2', 'nc|ENSG00000145703|Q13576-3|IQGAP2', 'nc|ENSG00000145703|Q13576-2|IQGAP2'] 103010 21249 SQITSLVTL True PC9_epitope_Rep1 960.54916177872 960.54861496793 86.557 1 0.0784777932757089 0.0036711682181722826 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 14101 13927 DSDSVPAFY True H1975_Epitope_Rep1 999.4185415319898 999.41797496793 58.724 1 0.07846028887637436 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 73574 20217 NFTNVAATF True PC9_epitope_Rep5 983.4712458111899 983.4706949679301 82.812 1 0.07845780253540775 0.0036711682181722826 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 116912 14803 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47107496793 62.074 1 0.07844412758368921 0.0036711682181722826 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 13290 7098 DLYDAGVK True NCI_RA007_Epitope_Rep5 879.43379767331 879.43270993586 33.982 2 0.07843226985711749 0.0036711682181722826 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 125473 18082 VLVDAFSHV True PC9_epitope_Rep2 985.5232813840499 985.52218993586 74.854 2 0.07843090264124063 0.0036711682181722826 0.9438714419765777 ['ENSG00000101413|ENST00000373433|RPRD1B'] 101510 12423 SPAAPVITA True PC9_epitope_Rep5 825.45961849833 825.4590749679301 52.784 1 0.07842381406534654 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 6289 6564 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 30.053 2 0.07842041497073546 0.0036711682181722826 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 32739 17380 GHVVDIVAL True PC9_epitope_Rep2 921.52836676449 921.52726993586 72.112 2 0.07840764823955082 0.0036711682181722826 0.9438714419765777 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 46813 11265 IVDSATALY True H1975_Epitope_Rep1 951.49131254943 951.4907649679301 48.307 1 0.0784072507144657 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 55513 16588 LAVVAGVAAE True PC9_epitope_Rep5 898.5123823471799 898.5118349679301 68.812 1 0.07840632787282392 0.0036711682181722826 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 77126 23168 NYASTFTWW True PC9_epitope_Rep5 1174.5083595959 1174.5072699358602 94.105 2 0.07839762012224225 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000052802|Q15800-2|MSMO1', 'ENSG00000052802|ENST00000261507|MSMO1'] 17324 7756 EHDPRVITV True PC9_epitope_Rep2 1064.56145779792 1064.56036993586 35.208 2 0.07838867409286368 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000102796|A0PJE2-2|DHRS12', 'ENSG00000102796|ENST00000444610|DHRS12', 'nc|ENSG00000102796|A0PJE2-3|DHRS12', 'nc|ENSG00000102796|A0PJE2|DHRS12'] 113722 9655 TRDETNYGIP True PC9_epitope_Rep6 1164.5411162761598 1164.54000993586 47.496 2 0.07838054150094745 0.0036711682181722826 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 40247 12018 HRIQDLEQL True PC9_epitope_Rep2 1150.6094706195 1150.60836993586 51.544 2 0.07837227162971978 0.0036711682181722826 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 76257 17049 NSDLNNLLF True H1975_Epitope_Rep3 1048.5189242796 1048.51837496793 71.179 1 0.07836014429375253 0.0036711682181722826 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 98964 11388 SKFPTQISL True NCI_RA007_Epitope_Rep5 1019.5651461960299 1019.56404993586 50.454 2 0.07833495676432252 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 97813 13927 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.4914349679301 58.649 1 0.0783327807498811 0.0036711682181722826 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 2416 16821 AEQLMTLISAA True H1975_Epitope_Rep3 1146.59546034814 1146.5943699358602 70.255 2 0.0783306503695563 0.0036711682181722826 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 38503 4439 HHDDPEVL True PC9_epitope_Rep4 960.4301092752 960.42900993586 23.534 2 0.07832603016821564 0.0036711682181722826 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 103311 21618 SQVAVAGLLTV True PC9_epitope_Rep1 1056.6179100448799 1056.61737496793 87.979 1 0.07830787469329785 0.0036711682181722826 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 62474 10955 LLSNDEVTIK True PC9_epitope_Rep4 1130.6183039677 1130.61720993586 49.908 2 0.07830722845183005 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 7517 12305 ASETAGSGFLY True H1975_Epitope_Rep3 1101.49785448185 1101.49727496793 52.512 1 0.07829510490040639 0.0036711682181722826 0.9438714419765777 ['ENSG00000170832|ENST00000300896|USP32', 'ENST00000587651.1_1_17:58296950-58303472:-|nuORF', 'USP32|p.R660Pfs*31|1|0.61|ENSG00000170832|chr17:60214663-60214663|C/-|frameshift_variant'] 68103 6809 LTPEELER True NCI_RA007_Epitope_Rep2 985.5080252427299 985.50692993586 31.101 2 0.0782867994306052 0.0036711682181722826 0.9438714419765777 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 1369 9223 AEEELETPTP True H1975_Epitope_Rep2 1114.50299943194 1114.50190993586 40.43 2 0.07827362636512342 0.0036711682181722826 0.9438714419765777 ['ENSG00000169217|ENST00000305596|CD2BP2'] 73739 7327 NHANGLTL True PC9_epitope_Rep2 838.4297153523801 838.42860993586 33.565 2 0.07827034357341373 0.0036711682181722826 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 99581 8440 SLFGSPVAK True NCI_RA007_Epitope_Rep5 904.50181766348 904.50072993586 39.144 2 0.07826225513377533 0.0036711682181722826 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 76642 15604 NTIDRLIQA True PC9_epitope_Rep3 1042.57710786206 1042.5760099358602 65.17 2 0.07826124828449102 0.0036711682181722826 0.9438714419765777 ['ENST00000371727.5_1_1:51938565-51946964:-|nuORF'] 23761 10756 EYIRSLNQF True NCI_RA007_Epitope_Rep4 1168.58767254576 1168.58656993586 48.219 2 0.07825202700859592 0.0036711682181722826 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 101831 19355 SPILVATAV True PC9_epitope_Rep5 869.52221875489 869.52112993586 79.495 2 0.07824990526744212 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 103531 17701 SRDDNMFQI True PC9_epitope_Rep1 1124.49205790876 1124.49147496793 72.882 1 0.07824990072761616 0.0036711682181722826 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 136762 19947 YIPTELDQV True PC9_epitope_Rep3 1076.53899101784 1076.5378899358602 81.969 2 0.07824614300276257 0.0036711682181722826 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 125359 10320 VLSQHFQTV True PC9_epitope_Rep2 1057.55564414149 1057.5545499358602 45.024 2 0.07824516662339503 0.0036711682181722826 0.9438714419765777 ['ENSG00000167720|ENST00000344595|SRR'] 44854 17428 IPYHIVNIV True PC9_epitope_Rep6 1066.6175161220601 1066.61640993586 79.651 2 0.07823791279353923 0.0036711682181722826 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 140476 22275 YYIEGIENSVF True PC9_epitope_Rep3 1332.62378327096 1332.62268993586 90.966 2 0.07823225443781166 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 7025 11094 AQSESILKV True PC9_epitope_Rep2 973.54441075145 973.54330993586 47.998 2 0.07823045572481485 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000203485|Q27J81-2|INF2', 'ENSG00000203485|ENST00000392634|INF2'] 75529 21889 NQLDSLMGL True PC9_epitope_Rep2 989.48518162317 989.48408993586 89.673 2 0.07821954708600444 0.0036711682181722826 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 104331 13231 SSEQTFMYY True H1975_Epitope_Rep1 1154.4590264449798 1154.4579299358602 55.99 2 0.07819285975962716 0.0036711682181722826 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 107643 20888 TAIDILTTV True PC9_epitope_Rep4 945.5382627418501 945.53716993586 88.504 2 0.07818691016894017 0.0036711682181722826 0.9438714419765777 ['ENSG00000198700|ENST00000361565|IPO9'] 27710 18744 FQDPSVTQL True PC9_epitope_Rep3 1033.50802524273 1033.5069299358602 77.321 2 0.0781848908139214 0.0036711682181722826 0.9438714419765777 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000563829.5_1_15:75146292-75165596:-|nuORF'] 11929 16185 DHSIIETL True PC9_epitope_Rep4 926.47091145802 926.46980993586 70.199 2 0.07818324204050485 0.0036711682181722826 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 1679 12439 AEGNEFWSA True H1975_Epitope_Rep3 1009.41412485789 1009.41357496793 53.038 1 0.0781726838288308 0.0036711682181722826 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000527897.1_1_11:64953408-64953522:+|nuORF'] 113716 11464 TRDETNYGIP True PC9_epitope_Rep5 1164.5411162761598 1164.54000993586 49.094 2 0.07817265324811237 0.0036711682181722826 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 106549 22537 SVVTSIFGV True PC9_epitope_Rep1 907.5014833103099 907.50038993586 91.491 2 0.07817261480716615 0.0036711682181722826 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 64173 12937 LQHEGIFRV True PC9_epitope_Rep1 1097.5981776598098 1097.5970899358601 54.635 2 0.07816981062452769 0.0036711682181722826 0.9438714419765777 ['ENSG00000089820|ENST00000350060|ARHGAP4', 'nc|ENSG00000089820|P98171-2|ARHGAP4', 'ENST00000494397.5_1_X:153175958-153178171:-|nuORF', 'ENST00000470209.5_1_X:153173185-153178999:-|nuORF', 'ENST00000404127.6_1_X:153173185-153186849:-|nuORF', 'ENSG00000266028|ENST00000573034|SRGAP2'] 139711 15164 YTVPGTEGV True PC9_epitope_Rep5 921.4443623570099 921.44326993586 63.335 2 0.07815582297377041 0.0036711682181722826 0.9438714419765777 ['ENST00000554757.1_1_14:104198706-104199352:+|nuORF', 'ENSG00000100711|ENST00000311141|ZFYVE21', 'ENST00000555501.1_1_14:104193911-104199352:+|nuORF', 'nc|ENSG00000100711|Q9BQ24-2|ZFYVE21'] 9149 20435 AVMPTLIQA True PC9_epitope_Rep1 942.5208388558998 942.51974993586 83.415 2 0.07814886353402618 0.0036711682181722826 0.9438714419765777 ['ENSG00000150403|ENST00000434316|TMCO3', 'nc|ENSG00000150403|Q6UWJ1-2|TMCO3'] 13961 13305 DRMVGQVL True PC9_epitope_Rep3 916.4800366730798 916.47892993586 56.211 2 0.07813086786209163 0.0036711682181722826 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'EIF2S3|p.G359A|1|0.39|ENSG00000130741|chrX:24071621-24071621|G/C|missense_variant'] 113816 7239 TREAGSALL True PC9_epitope_Rep4 916.4977949121999 916.49668993586 35.149 2 0.0781274771316321 0.0036711682181722826 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2', 'CCNA2|p.A20P|1|0.15|ENSG00000145386|chr4:121823571-121823571|C/G|missense_variant'] 17648 12105 EHQPSVLL True PC9_epitope_Rep1 921.4919812557699 921.49088993586 51.422 2 0.07811814830816029 0.0036711682181722826 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT'] 129965 13562 VTNSVFHEI True PC9_epitope_Rep2 1044.52400966004 1044.52290993586 57.457 2 0.07810494114397666 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000074416|Q99685-2|MGLL', 'nc|ENSG00000074416|Q99685|MGLL', 'ENSG00000074416|ENST00000265052|MGLL'] 31678 8222 GEIENQITA True H1975_Epitope_Rep3 973.4716397340098 973.4710949679301 36.609 1 0.07809563581196712 0.0036711682181722826 0.9438714419765777 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 64198 11915 LQIDNARLA True PC9_epitope_Rep2 1012.5665431783599 1012.56544993586 51.156 2 0.07808804927671317 0.0036711682181722826 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000520711.1_1_8:41368829-41369321:+|nuORF', 'ENST00000527480.1_1_11:6015523-6015940:-|nuORF', 'ENST00000425692.6_1_17:16723399-16724021:-|nuORF', 'ENST00000417510.5_1_17:16723399-16724042:-|nuORF', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000534728.1_1_11:124983810-124984254:+|nuORF', 'ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'ENST00000491673.1_1_17:39779200-39780782:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'CON__P05784', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7', 'ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 104694 3707 STASELSPK True NCI_RA007_Epitope_Rep4 918.46582607758 918.46472993586 20.384 2 0.07808595672650655 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 103426 23132 SQYPEIIFL True PC9_epitope_Rep3 1108.580461907 1108.57987496793 94.244 1 0.07808323756110587 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 5168 20995 ALPEDLVEV True PC9_epitope_Rep2 983.5175272972699 983.51642993586 86.209 2 0.07807900914158127 0.0036711682181722826 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 9931 18776 AYPYNFSNL True PC9_epitope_Rep6 1087.49746055903 1087.49636993586 84.862 2 0.07806146944844884 0.0036711682181722826 0.9438714419765777 ['ENSG00000174282|ENST00000380599|ZBTB4'] 91955 8035 RPPPIGAEV True PC9_epitope_Rep4 934.5236157372199 934.52250993586 38.359 2 0.07805038327420755 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 42586 7134 IESRTLAIA True NCI_RA007_Epitope_Rep3 972.5603951687599 972.55928993586 35.181 2 0.07804829527203455 0.0036711682181722826 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 72707 22637 MYPLKPTWWF True PC9_epitope_Rep5 1367.6736510991898 1367.6725499358602 92.074 2 0.07803009508407577 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1'] 96651 10410 SENPSVYVP True H1975_Epitope_Rep1 990.4658260775799 990.4652749679301 44.994 1 0.07802267675164593 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 98641 9289 SIPGGPVRL True H1975_Epitope_Rep2 894.52870111766 894.52760993586 40.688 2 0.07802149540796059 0.0036711682181722826 0.9438714419765777 ['CON__P12763'] 26284 18428 FIDDANYSV True PC9_epitope_Rep5 1042.4607406971402 1042.46017496793 75.904 1 0.07802134660896935 0.0036711682181722826 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 87065 10727 QSEIASM[Oxidation]LY True H1975_Epitope_Rep1 1056.47976227 1056.4786699358601 46.224 2 0.07801609338156637 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 137433 18601 YLMEVTHDL True PC9_epitope_Rep5 1119.52704643515 1119.5259499358601 76.573 2 0.0780156306598852 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'nc|ENSG00000133706|Q9P2J5-3|LARS1'] 108751 8488 TENSFVVSS True H1975_Epitope_Rep2 968.445090633 968.44454496793 37.601 1 0.07800743664557971 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 7959 16906 ATDLAYYLV True H1975_Epitope_Rep1 1027.52261267771 1027.52207496793 70.441 1 0.07800588432150382 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL', 'ASL|p.R379L|1|0.21|ENSG00000126522|chr7:66092079-66092079|G/T|missense_variant'] 35648 5108 GTMKAQGVLLK True NCI_RA007_Epitope_Rep3 1144.6638146914797 1144.6627099358602 27.084 2 0.07799703076110831 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000166482|P55083-2|MFAP4'] 86035 15030 QPLGTLPQA True PC9_epitope_Rep2 923.5076313199098 923.50708496793 63.069 1 0.07799337156809584 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 61351 4963 LLEGEESR True PC9_epitope_Rep1 931.4610750503099 931.45996993586 23.949 2 0.07797647127823593 0.0036711682181722826 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 2523 10435 AEQTLSQLP True H1975_Epitope_Rep2 985.5080252427299 985.50692993586 45.153 2 0.07796708990148761 0.0036711682181722826 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 6294 7490 APRQPGLM[Oxidation]A True PC9_epitope_Rep1 955.4909360903898 955.48982993586 33.63 2 0.07796088184380301 0.0036711682181722826 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 102673 4461 SQDPGTHVV True PC9_epitope_Rep3 938.4457593393399 938.44466993586 22.255 2 0.07796057782663875 0.0036711682181722826 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 6869 12371 AQIGSYVHV True PC9_epitope_Rep4 972.50288029264 972.50178993586 55.392 2 0.07795149321920108 0.0036711682181722826 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 6961 5169 AQMREATTL True NCI_RA007_Epitope_Rep3 1019.50697969691 1019.50588993586 27.324 2 0.0779504706721549 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 95991 8433 SEAEKVYIV True H1975_Epitope_Rep3 1036.5440763982797 1036.54357496793 37.421 1 0.077944025490243 0.0036711682181722826 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7'] 117074 22109 TYQVLAVTF True PC9_epitope_Rep1 1040.5542471591598 1040.5531499358601 89.854 2 0.07793693514604992 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 107642 21721 TAIDILTTV True PC9_epitope_Rep3 945.5382627418501 945.53716993586 88.843 2 0.07792910598677547 0.0036711682181722826 0.9438714419765777 ['ENSG00000198700|ENST00000361565|IPO9'] 106932 13749 SYKDSTLIM True PC9_epitope_Rep5 1056.51614739828 1056.5150499358601 57.907 2 0.07792861152030792 0.0036711682181722826 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 33174 7087 GKTVISQSL True NCI_RA007_Epitope_Rep1 931.5338460677499 931.53274993586 31.561 2 0.07792246999743412 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 42588 7779 IESRTLAIA True NCI_RA007_Epitope_Rep4 972.5603951687599 972.55928993586 36.603 2 0.07791744236345417 0.0036711682181722826 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 130417 11461 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 51.015 2 0.07791505341571456 0.0036711682181722826 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 5313 10131 ALSGHLETV True PC9_epitope_Rep5 925.48689587533 925.48578993586 43.953 2 0.07791273947639464 0.0036711682181722826 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 41098 17344 HYMPPPYASL True PC9_epitope_Rep1 1174.5481162328997 1174.5470099358602 71.526 2 0.07791097462084813 0.0036711682181722826 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 102480 8115 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 36.189 2 0.07790115262985405 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 1135 7806 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.45342993586 35.009 2 0.07789017253920864 0.0036711682181722826 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 86203 21544 QPVQLLVEL True PC9_epitope_Rep5 1037.6120963884498 1037.61098993586 87.906 2 0.07788503653762374 0.0036711682181722826 0.9438714419765777 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF', 'ENST00000525238.2_1_19:1041360-1041637:+|nuORF', 'ENST00000527496.1_1_19:1041282-1041972:+|nuORF'] 133203 16213 WEALVSPVV True H1975_Epitope_Rep1 998.54368247546 998.5431349679301 67.712 1 0.07787919247020154 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 126591 6065 VPPPPPIAR True H1975_Epitope_Rep1 942.56508662638 942.56398993586 28.396 2 0.0778677259106401 0.0036711682181722826 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 71833 22067 MPFAGLISA True PC9_epitope_Rep1 905.46807500705 905.4675249679301 89.69 1 0.07786655039061639 0.0036711682181722826 0.9438714419765777 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 115301 17654 TVDPASLWEY True H1975_Epitope_Rep2 1179.54480467427 1179.54370993586 73.226 2 0.07786085219509484 0.0036711682181722826 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1', 'ENST00000473330.1_1_7:5642709-5645102:+|nuORF', 'CARD11-FSCN1|1|fusion'] 54460 6579 LAAAAAAAA True PC9_epitope_Rep5 699.3915389385099 699.39099496793 30.276 1 0.07785992989417419 0.0036711682181722826 0.9438714419765777 ['ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000198944|ENST00000378693|SOWAHA', 'ENSG00000151789|ENST00000281523|ZNF385D', 'ENST00000374888.2_1_X:57618686-57618833:+|nuORF', 'ENST00000356978.8_1_14:90863393-90866410:+|nuORF', 'ENST00000312719.9_1_6:114663491-114664094:-|nuORF', 'ENST00000489266.5_1_10:123733883-123734162:-|nuORF', 'ENST00000447653.7_1_14:90863393-90865345:+|nuORF', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant', 'ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2', 'ENSG00000167470|ENST00000682408|MIDN', 'nc|ENSG00000167470|Q504T8|MIDN', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000071553|ENST00000369762|ATP6AP1', 'nc|ENSG00000235927|Q8NBZ9|NEXN-AS1', 'ENST00000380007.2_1_5:94956482-94957517:+|nuORF'] 86524 12071 QRALLANAL True PC9_epitope_Rep6 968.5767139392399 968.57560993586 57.749 2 0.07785274377816255 0.0036711682181722826 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 1049 8389 AEAILGQNAA True H1975_Epitope_Rep2 956.4927095317599 956.49160993586 37.221 2 0.0778510850173639 0.0036711682181722826 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 107322 17660 SYRELFEFF True NCI_RA007_Epitope_Rep3 1236.5815245361598 1236.5804299358601 77.437 2 0.0778415230184303 0.0036711682181722826 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 62156 9852 LLPGKTYSF True NCI_RA007_Epitope_Rep3 1024.5593325395998 1024.55822993586 45.826 2 0.07784053663556204 0.0036711682181722826 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 118900 4898 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 23.923 2 0.07782938004311644 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 105085 12124 STLDGSLHAV True PC9_epitope_Rep5 998.5032742154599 998.50216993586 51.624 2 0.07782404194259919 0.003674075618208823 0.9438714419765777 ['ENST00000583028.1_1_17:62175367-62207458:-|nuORF', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENSG00000178607|ENST00000433197|ERN1'] 2420 5185 AEQLRDEEV True H1975_Epitope_Rep3 1087.51456717515 1087.51346993586 25.04 2 0.07782241348822028 0.003674075618208823 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 34695 19153 GQLSEGAIAAI True PC9_epitope_Rep2 1028.5502244078798 1028.54912993586 79.043 2 0.07781829957877975 0.003674075618208823 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 102621 18259 SQATDFGEALV True PC9_epitope_Rep6 1136.5349682665599 1136.5338699358601 82.874 2 0.07781678379561227 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 70744 17063 MEALPLLAA True H1975_Epitope_Rep3 927.5099398190299 927.50939496793 71.24 1 0.07781244295309518 0.003674075618208823 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 106014 19277 SVLNELPSA True PC9_epitope_Rep3 928.48656152216 928.48601496793 79.37 1 0.07781185875418614 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000167608|Q7Z404|TMC4', 'TMC4|p.V56Cfs*94|1|0.22|ENSG00000167608|chr19:54172015-54172015|C/-|frameshift_variant', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 39750 19243 HPYLFPVAA True PC9_epitope_Rep3 1013.5334521449298 1013.53234993586 79.238 2 0.07780659171060109 0.003674075618208823 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 117072 16839 TYQVLAVTF True NCI_RA007_Epitope_Rep4 1040.5542471591598 1040.5531499358601 72.966 2 0.0778005530869032 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 4387 10259 AIRLELQGPR True PC9_epitope_Rep4 1151.6774906096698 1151.67583490379 47.145 3 0.07779129588258234 0.003674075618208823 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 61346 2823 LLEGEESR True NCI_RA007_Epitope_Rep1 931.4610750503099 931.45996993586 14.81 2 0.07779085387391203 0.003674075618208823 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 77157 15606 NYENKQYLF True PC9_epitope_Rep5 1217.57168812845 1217.5705899358602 65.04 2 0.07778148625586248 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 95609 17223 SATLVLAYL True H1975_Epitope_Rep2 949.54843350273 949.54788496793 71.538 1 0.07777327399078758 0.003674075618208823 0.9438714419765777 ['ENSG00000188716|ENST00000338487|DUSP29', 'nc|ENSG00000133878|Q9BV47-2|DUSP26', 'ENSG00000133878|ENST00000256261|DUSP26', 'nc|ENSG00000293543|Q6B8I1|DUSP13A'] 23167 6275 EVPAVPETLKK True NCI_RA007_Epitope_Rep5 1209.69688864157 1209.6952349037902 30.816 3 0.07777238165252684 0.003674075618208823 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7'] 102061 7064 SPPPPPPPP True PC9_epitope_Rep6 881.4647038787699 881.46360993586 36.196 2 0.0777712302290559 0.003674075618208823 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 123320 12916 VHTIVNETL True PC9_epitope_Rep1 1024.55530978832 1024.5542099358602 54.554 2 0.0777510865397491 0.003674075618208823 0.9438714419765777 ['ENSG00000023516|ENST00000025301|AKAP11', 'AKAP11|p.S1150Rfs*7|1|0.23|ENSG00000023516|chr13:42302192-42302195|TGTC/-|frameshift_variant'] 139868 20704 YVDPVITSI True PC9_epitope_Rep5 1005.53826274185 1005.53716993586 84.695 2 0.07773785227967282 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 96104 12093 SEDPTVPLP True H1975_Epitope_Rep1 953.4705771048499 953.47002496793 51.529 1 0.07772886231376781 0.003674075618208823 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 96216 7877 SEELTVTNA True H1975_Epitope_Rep3 962.4556553167 962.45454993586 35.276 2 0.0777267351910747 0.003674075618208823 0.9438714419765777 ['ENSG00000237649|ENST00000428849|KIFC1'] 42821 16556 IFKPPDPDNTF True PC9_epitope_Rep4 1289.62920300457 1289.62810993586 71.656 2 0.07772162464425052 0.003674075618208823 0.9438714419765777 ['ENSG00000165943|ENST00000298894|MOAP1'] 41728 11343 IDNNIEQIS True PC9_epitope_Rep6 1044.50875351872 1044.5076499358602 54.67 2 0.0777206342523547 0.003674075618208823 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 21296 8764 ERIQHAVQL True PC9_epitope_Rep1 1092.60399131624 1092.60288993586 38.549 2 0.07771626394164106 0.003674075618208823 0.9438714419765777 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 139285 6934 YTDKIM[Oxidation]TY True H1975_Epitope_Rep1 1049.47394861357 1049.47284993586 31.715 2 0.07771548847935801 0.003674075618208823 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 31349 7551 GEAPAALEA True H1975_Epitope_Rep3 827.40249754503 827.40194496793 34.026 1 0.07771272989062097 0.003674075618208823 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 6660 16927 AQAGALLQV True PC9_epitope_Rep4 869.49706663621 869.49596993586 73.097 2 0.07771075681276397 0.003674075618208823 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 102667 10270 SQDNVIKVC True PC9_epitope_Rep5 1004.49608066004 1004.49498993586 44.49 2 0.07770255843743998 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 140106 22038 YVPPELITL True PC9_epitope_Rep2 1043.59029831471 1043.58920993586 90.241 2 0.07770171385526728 0.003674075618208823 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 96056 4107 SEAPPTNQATA True H1975_Epitope_Rep2 1085.49891711101 1085.4978299358602 20.89 2 0.07768469196983044 0.003674075618208823 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 117577 17470 VAGMPVFL True H1975_Epitope_Rep2 832.4516966669199 832.4511449679301 72.491 1 0.07767903338823681 0.003674075618208823 0.9438714419765777 ['ENSG00000139410|ENST00000403593|SDSL', 'SDSL|p.P141Rfs*6|1|0.24|ENSG00000139410|chr12:113434196-113434196|C/-|frameshift_variant'] 77489 12787 NYPQSVPRL True PC9_epitope_Rep2 1072.56654317836 1072.5654499358602 54.488 2 0.07766805094128791 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 1180 7512 AEDDLNTVA True H1975_Epitope_Rep2 946.42435518842 946.4238049679301 33.845 1 0.0776499747184244 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 6008 8078 APLLQPRAA True PC9_epitope_Rep2 935.5552502186699 935.55414993586 36.431 2 0.07764444581542049 0.003674075618208823 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 108511 11942 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 51.013 1 0.07764035194703932 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 35015 15670 GRAPQVLVL True PC9_epitope_Rep1 951.5865503469499 951.58544993586 65.096 2 0.0776335313156457 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 84733 14202 QHGGFVVTV True PC9_epitope_Rep3 942.4923156089399 942.49120993586 59.714 2 0.077624746533192 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 99117 20562 SLAGGIIGV True PC9_epitope_Rep5 785.46470387877 785.4641549679301 84.136 1 0.07762120903624593 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 38799 9218 HHYSGNNIEL True PC9_epitope_Rep5 1182.5417849825 1182.54013490379 40.403 3 0.07759922974163433 0.003674075618208823 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 113651 6317 TRDEDHIAL True PC9_epitope_Rep4 1068.51998690876 1068.5188899358602 31.36 2 0.07757588099256021 0.003674075618208823 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 67030 20305 LTAPALALA True PC9_epitope_Rep5 839.5116540711899 839.51110496793 83.147 1 0.07757301879574449 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 32720 8170 GHSTAVVSL True PC9_epitope_Rep4 869.46068112749 869.45958993586 38.881 2 0.07756325607798212 0.003674075618208823 0.9438714419765777 ['ENSG00000156463|ENST00000359120|SH3RF2', 'SH3RF2|p.S564Qfs*64|1|0.55|ENSG00000156463|chr5:146059995-146059995|C/-|frameshift_variant', 'SH3RF2|p.A673Rfs*13|1|0.23|ENSG00000156463|chr5:146062527-146062527|G/-|frameshift_variant'] 75658 17065 NQSGQVFGL True PC9_epitope_Rep6 948.4664947839199 948.46538993586 78.205 2 0.07755240794832902 0.003674075618208823 0.9438714419765777 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 109702 10532 THFHELTAL True PC9_epitope_Rep6 1067.53999407735 1067.5388899358602 51.301 2 0.07754847056895213 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 110468 18324 TIPEILPKL True PC9_epitope_Rep6 1022.6375828602999 1022.6364899358599 83.126 2 0.07753794409823725 0.003674075618208823 0.9438714419765777 ['ENSG00000121879|ENST00000263967|PIK3CA'] 102324 6452 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 29.843 2 0.07752834789089617 0.003674075618208823 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 44282 22266 ILVQVIPVV True PC9_epitope_Rep2 978.6477536211798 978.64664993586 91.125 2 0.07751801622568318 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000117595|O14896-2|IRF6', 'IRF6|p.P426Sfs*9|1|0.1|ENSG00000117595|chr1:209788543-209788549|GTCTGGG/-|frameshift_variant', 'ENSG00000117595|ENST00000367021|IRF6'] 88487 6404 RAAEPVQL True H1975_Epitope_Rep2 882.4923156089399 882.49120993586 29.556 2 0.07751710251984546 0.003674075618208823 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 8842 14578 AVFPSIVGR True PC9_epitope_Rep6 944.5443511817999 944.54324993586 67.97 2 0.07750654546624362 0.003674075618208823 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 107301 9464 SYRDSYDSY True PC9_epitope_Rep5 1154.45163256542 1154.45052993586 41.359 2 0.0775033902162832 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'ENST00000591055.5_1_19:1271297-1272439:+|nuORF', 'ENST00000593128.5_1_19:1271297-1272439:+|nuORF', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP', 'ENST00000590347.5_1_19:1271297-1272439:+|nuORF', 'ENST00000590704.5_1_19:1271297-1272439:+|nuORF', 'nc|ENSG00000099622|Q14011-3|CIRBP', 'ENST00000591097.5_1_19:1271671-1272439:+|nuORF'] 140587 19191 YYLTHGLYL True PC9_epitope_Rep4 1141.58079626017 1141.5796899358602 81.917 2 0.07749689921348751 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000101464|Q9H490-2|PIGU', 'ENSG00000101464|ENST00000217446|PIGU'] 105582 7012 SVEADINGLRR True H1975_Epitope_Rep1 1228.65239806064 1228.65076490379 32.006 3 0.07748614288639055 0.003674075618208823 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P08730-1', 'ENST00000468313.5_1_17:39657932-39661743:-|nuORF', 'nc|ENSG00000171401|P13646-3|KRT13', 'CON__ENSEMBL:ENSP00000377550', 'ENSG00000171401|ENST00000246635|KRT13', 'CON__P13646-1', 'KRT13|p.I394Tfs*34|1|0.14|ENSG00000171401|chr17:41502430-41502437|TGTCTTGA/-|frameshift_variant', 'nc|ENSG00000171401|P13646-2|KRT13', 'CON__P19001', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000493253.5_1_17:39778327-39780527:-|nuORF', 'CON__Q6IFX2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF'] 298 9727 AAHLLNDAL True NCI_RA007_Epitope_Rep4 936.50288029264 936.50178993586 44.26 2 0.07748584104649305 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'ENST00000467906.5_1_6:43030654-43039600:+|nuORF', 'nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 77384 13551 NYLSIFRKF True NCI_RA007_Epitope_Rep4 1186.6498788795 1186.6487899358601 59.33 2 0.07748520264242513 0.003674075618208823 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 576 10020 AARLPLDAA True PC9_epitope_Rep4 896.5079656730799 896.50686993586 46.205 2 0.07748213303205916 0.003674075618208823 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 135638 7165 YEERVQAVVA True H1975_Epitope_Rep2 1162.59823722946 1162.5971499358602 32.493 2 0.07748198481316555 0.003674075618208823 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 18041 15492 EIIQRIENV True PC9_epitope_Rep5 1112.61897267404 1112.6178699358602 64.599 2 0.07747460179982282 0.003674075618208823 0.9438714419765777 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF', 'nc|ENSG00000172239|Q9H074-3|PAIP1', 'nc|ENSG00000172239|Q9H074-2|PAIP1', 'ENSG00000172239|ENST00000306846|PAIP1'] 56788 14930 LEATINELV True NCI_RA007_Epitope_Rep1 1000.5440763982799 1000.54357496793 62.136 1 0.07747406595008474 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 30282 18548 GAAPLPLLL True H1975_Epitope_Rep1 863.54803957991 863.5474949679301 77.33 1 0.07746963828728956 0.003674075618208823 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 83870 12557 QEIATVVVP True H1975_Epitope_Rep1 954.5385970950199 954.5380449679301 53.345 1 0.07746651339553877 0.003674075618208823 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 13967 17364 DRNAVIVAL True PC9_epitope_Rep1 969.5607295219299 969.55962993586 71.601 2 0.07746387433802866 0.003674075618208823 0.9438714419765777 ['PTGES3-UBE2K|1|fusion', 'nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K'] 75994 15510 NRILGDPEAL True PC9_epitope_Rep1 1096.58767254576 1096.58656993586 64.482 2 0.07745978142174331 0.003674075618208823 0.9438714419765777 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000509749.1_1_5:135385157-135385316:+|nuORF', 'ENST00000515433.1_1_5:135385061-135390565:+|nuORF'] 120058 21247 VFFKELIQEF True PC9_epitope_Rep4 1298.6910749851397 1298.68996993586 89.891 2 0.07745477848894083 0.003674075618208823 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3', 'ENST00000581642.1_1_17:80193878-80194172:+|nuORF', 'ENST00000584781.5_1_17:80193878-80195055:+|nuORF', 'ENST00000579572.1_1_17:80193878-80195110:+|nuORF'] 140320 11274 YYEEQHPEL True PC9_epitope_Rep1 1206.5193182024198 1206.51822993586 48.245 2 0.07745228217568745 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 17201 15332 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 64.255 2 0.07744666525214118 0.003674075618208823 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 84292 8365 QEYSEFVKA True NCI_RA007_Epitope_Rep5 1099.5185899264297 1099.51748993586 38.848 2 0.07744522875970007 0.003674075618208823 0.9438714419765777 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 108093 14796 TDLLLEPYNK True PC9_epitope_Rep6 1204.6339540318397 1204.6328499358601 68.883 2 0.07744165560377798 0.003674075618208823 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 118669 16009 VEAQPPWLP True H1975_Epitope_Rep2 1035.5389314481897 1035.5378299358601 66.777 2 0.07743700868771837 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000100299|P15289-2|ARSA', 'nc|ENSG00000100299|P15289|ARSA', 'ENSG00000100299|ENST00000216124|ARSA', 'ENST00000551731.1_1_22:51065210-51065465:-|nuORF'] 140881 19266 YYTSVTPVL True PC9_epitope_Rep4 1041.5382627418498 1041.53767496793 82.209 1 0.07743589409317224 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 126094 4990 VPDRFTGSG True NCI_RA007_Epitope_Rep4 934.4508447197799 934.44974993586 25.671 2 0.0774243404726682 0.003674075618208823 0.9438714419765777 ['CON__Q05B55'] 40383 18631 HRTEMDWVL True PC9_epitope_Rep3 1185.5600778989299 1185.5589899358602 76.884 2 0.07742392732719255 0.003674075618208823 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 52603 15972 KQADPFASL True PC9_epitope_Rep5 975.5025459394699 975.50144993586 66.425 2 0.0774148259419438 0.003674075618208823 0.9438714419765777 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 13963 13167 DRMVGQVL True PC9_epitope_Rep5 916.4800366730798 916.47892993586 55.651 2 0.0774126992167439 0.003674075618208823 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'EIF2S3|p.G359A|1|0.39|ENSG00000130741|chrX:24071621-24071621|G/C|missense_variant'] 194 20512 AAFDGGFTV True PC9_epitope_Rep5 883.4075829254699 883.40703496793 83.941 1 0.07739098228948318 0.003674075618208823 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 75744 18321 NRAATLMML True PC9_epitope_Rep5 1019.5256069665099 1019.52450993586 75.486 2 0.07738487333957342 0.003674075618208823 0.9438714419765777 ['ENSG00000168259|ENST00000457167|DNAJC7', 'nc|ENSG00000168259|Q99615-2|DNAJC7'] 40811 17092 HVIGSLAEI True PC9_epitope_Rep3 937.5232813840499 937.52218993586 70.896 2 0.07737410125554435 0.003674075618208823 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant', 'nc|ENSG00000133704|O15397-2|IPO8'] 138236 8140 YQTEKGITV True PC9_epitope_Rep2 1037.5393253710097 1037.53822993586 36.668 2 0.07736652971782346 0.003674075618208823 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 19691 6114 ELSEALTR True H1975_Epitope_Rep3 917.4818104948899 917.48070993586 28.529 2 0.07735709936302552 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1'] 60287 19147 LIENVASL True PC9_epitope_Rep5 857.4858332461699 857.48472993586 78.683 2 0.07735113456349314 0.003674075618208823 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2', 'nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1'] 91709 19395 RPGTAFELLEA True PC9_epitope_Rep2 1202.62953735774 1202.62844993586 79.981 2 0.07735000598697749 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 134904 12504 YADPTKRLEL True PC9_epitope_Rep2 1204.6451874218799 1204.6435349037902 53.406 3 0.07734783834943725 0.003674075618208823 0.9438714419765777 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'GTF3C5|p.P179Rfs*26|1|0.09|ENSG00000148308|chr9:133043887-133043887|C/-|frameshift_variant'] 34649 18887 GQISEVVVV True PC9_epitope_Rep5 928.5229470308799 928.52184993586 77.668 2 0.0773469157967354 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 52352 9478 KPFGQVIST True PC9_epitope_Rep6 975.5389314481899 975.53782993586 46.704 2 0.07733542293878366 0.003674075618208823 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 61947 5014 LLLNNGAK True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 25.99 2 0.0773256289909336 0.003674075618208823 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 70795 10300 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42717496793 44.626 1 0.07732120602994756 0.003674075618208823 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 94511 17790 RYIDRIHIF True PC9_epitope_Rep1 1231.68257599011 1231.68094490379 73.225 3 0.07731810274196906 0.003674075618208823 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 38848 12430 HIGDAVVI True PC9_epitope_Rep4 822.4599528515 822.45884993586 55.615 2 0.07730540559462956 0.003674075618208823 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 4277 22180 AIISELVSI True PC9_epitope_Rep2 943.5589981864299 943.5584449679301 90.802 1 0.077301963469453 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 12555 14069 DLDGIIAEVK True H1975_Epitope_Rep3 1071.58119018299 1071.58008993586 59.44 2 0.07727656746630455 0.003674075618208823 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF'] 108326 6090 TEDPHTVL True H1975_Epitope_Rep2 910.43961132974 910.43850993586 28.4 2 0.07727024572011655 0.003674075618208823 0.9438714419765777 ['ENST00000567111.1_1_16:2284613-2285107:+|nuORF', 'ENST00000569796.1_1_16:2284558-2285107:+|nuORF', 'ENSG00000167967|ENST00000301727|E4F1'] 5039 15494 ALLGDLTKA True PC9_epitope_Rep2 900.52803241132 900.52692993586 64.872 2 0.0772662798710385 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 34586 19129 GQGEVLVYV True PC9_epitope_Rep4 962.5072969667398 962.5067449679301 81.672 1 0.07725927606765173 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 9930 20855 AYPYNFSNL True PC9_epitope_Rep3 1087.49746055903 1087.49636993586 85.492 2 0.07725368677443929 0.003674075618208823 0.9438714419765777 ['ENSG00000174282|ENST00000380599|ZBTB4'] 23780 11375 EYKNTNEMF True PC9_epitope_Rep1 1174.49647458286 1174.49536993586 48.635 2 0.07723749530801353 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 75807 19335 NRDDIGIIL True PC9_epitope_Rep5 1027.56620882519 1027.5651099358602 79.416 2 0.07723638956794171 0.003674075618208823 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 96008 9231 SEAFSVASA True H1975_Epitope_Rep3 867.3974121645899 867.39630993586 40.498 2 0.07723452551309791 0.003674075618208823 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 108973 7746 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 34.748 1 0.07722677399227441 0.003674075618208823 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 43900 14529 ILDPHVVLL True H1975_Epitope_Rep1 1017.6222671493299 1017.6211699358599 61.089 2 0.07722248046470606 0.003674075618208823 0.9438714419765777 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 73986 12714 NHQGATPLVL True PC9_epitope_Rep1 1048.56654317836 1048.5654499358602 53.776 2 0.07722026611737666 0.003674075618208823 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 11095 4571 DEDKEKTFEEK True H1975_Epitope_Rep3 1396.6358045066397 1396.63414490379 22.703 3 0.07721771490783456 0.003674075618208823 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 27711 17680 FQDPSVTQL True PC9_epitope_Rep4 1033.50802524273 1033.5069299358602 76.03 2 0.07720909764443266 0.003674075618208823 0.9438714419765777 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000563829.5_1_15:75146292-75165596:-|nuORF'] 17625 7349 EHNIFHNEV True PC9_epitope_Rep4 1137.5203212619301 1137.51868490379 35.6 3 0.0772058608334455 0.003674075618208823 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 103012 20292 SQITSLVTL True PC9_epitope_Rep4 960.54916177872 960.54861496793 86.196 1 0.07719482145554485 0.003674075618208823 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 71345 10001 MHSGPVVAM True PC9_epitope_Rep1 927.43064395251 927.42954993586 43.335 2 0.07718937838828759 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF', 'NMT1-NME1|1|fusion'] 34790 7256 GQTGVIRSV True PC9_epitope_Rep1 915.5137793295099 915.51268993586 32.723 2 0.07718397779006785 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 106624 17640 SWPEGHFATI True PC9_epitope_Rep4 1143.53490869691 1143.53380993586 75.874 2 0.07717374523356228 0.003674075618208823 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1'] 1709 5689 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41284496793 26.913 1 0.07716790857913235 0.003674075618208823 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 43721 6764 IISAPSAD True H1975_Epitope_Rep3 772.3966838886 772.39613496793 30.972 1 0.07716229398975664 0.003674075618208823 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 104084 10973 SRVDGVVL True PC9_epitope_Rep2 843.48141657207 843.48030993586 47.531 2 0.07714846167445986 0.003674075618208823 0.9438714419765777 ['ENST00000496699.1_1_1:117509714-117517097:+|nuORF', 'ENSG00000134247|ENST00000393203|PTGFRN'] 29287 8257 FVDMGHSAY True H1975_Epitope_Rep3 1025.42766674705 1025.42656993586 36.746 2 0.07714084666008024 0.003674075618208823 0.9438714419765777 ['ENSG00000170606|ENST00000304858|HSPA4', 'HSPA4|p.V199I|1|0.48|ENSG00000170606|chr5:133074058-133074058|G/A|missense_variant'] 20081 9157 ENGSLYDY True H1975_Epitope_Rep2 959.38724140371 959.3866949679301 40.174 1 0.0771346816889775 0.003674075618208823 0.9438714419765777 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 40145 12808 HRDWVSSQL True PC9_epitope_Rep5 1126.55195574338 1126.5503249037902 54.277 3 0.07712886583812702 0.003674075618208823 0.9438714419765777 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000533676.5_1_11:61641288-61643947:-|nuORF', 'ENST00000529404.5_1_11:61643581-61643947:-|nuORF'] 39367 11923 HLVDEPQNLIK True PC9_epitope_Rep2 1304.7088503076 1304.7077499358602 51.185 2 0.07712480604871154 0.003674075618208823 0.9438714419765777 ['CON__P02769'] 48897 9368 KEVDLIPKV True NCI_RA007_Epitope_Rep4 1039.62774645259 1039.62664993586 42.888 2 0.07711542029603001 0.003674075618208823 0.9438714419765777 ['FAM21A-LURAP1L|1|fusion', 'nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A', 'ENST00000492914.1_1_10:51829372-51845265:+|nuORF', 'FAM21C-LURAP1L|1|fusion', 'FAM21C-LURAP1L|2|fusion', 'nc|ENSG00000172661|Q9Y4E1-5|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-6|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-4|WASHC2C', 'ENSG00000172661|ENST00000623400|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C'] 2711 8670 AETLAPVQA True H1975_Epitope_Rep3 898.47599683846 898.47488993586 38.347 2 0.077113683237795 0.003674075618208823 0.9438714419765777 ['ENSG00000018408|ENST00000360632|WWTR1', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 115700 22094 TVLEQVLPI True PC9_epitope_Rep2 1010.6011973515798 1010.60010993586 90.457 2 0.07710990458853932 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 113466 21304 TQRGALFLLF True PC9_epitope_Rep4 1164.6655289436399 1164.6644299358602 90.113 2 0.07708874170078615 0.003674075618208823 0.9438714419765777 ['ENST00000481988.1_1_X:99901319-99905990:+|nuORF', 'ENSG00000102359|ENST00000373004|SRPX2'] 140109 21244 YVPPELITL True PC9_epitope_Rep4 1043.59029831471 1043.58920993586 89.88 2 0.07708056197705959 0.003674075618208823 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 40260 13292 HRLLTDII True PC9_epitope_Rep6 979.58146496651 979.58036993586 62.782 2 0.07705343544188402 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 6527 11806 APVAEVPTA True PC9_epitope_Rep3 853.4545331178899 853.45342993586 50.429 2 0.07703627744991662 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 63973 10072 LQAETSQQL True PC9_epitope_Rep3 1016.51383889916 1016.51274993586 43.696 2 0.07703420187274182 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 46498 22035 ITPENLPQILL True PC9_epitope_Rep4 1249.7281887698498 1249.72708993586 92.978 2 0.07702745189689096 0.003674075618208823 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 28854 11875 FTDPRAYLKY True H1975_Epitope_Rep2 1272.6502728023197 1272.64861490379 50.756 3 0.07702254586934514 0.003674075618208823 0.9438714419765777 ['ENSG00000026652|ENST00000320285|AGPAT4'] 70919 12701 M[Oxidation]ELITPISA True H1975_Epitope_Rep2 989.5103341222899 989.50922993586 53.955 2 0.07702098428906792 0.003674075618208823 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 97846 11658 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.4914349679301 55.971 1 0.07700827743320628 0.003674075618208823 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 40094 6452 HRDERVLSL True PC9_epitope_Rep6 1123.60980497267 1123.60816490379 33.449 3 0.07700090798393362 0.003674075618208823 0.9438714419765777 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 15144 12221 EAEPHPLWEY True H1975_Epitope_Rep1 1269.56660274801 1269.56550993586 52.029 2 0.07699858980891712 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 33340 18138 GLDSQFVEV True PC9_epitope_Rep6 992.4814761417199 992.48036993586 82.405 2 0.07699600274356239 0.003674075618208823 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 96513 7646 SELFGPRAA True H1975_Epitope_Rep3 946.4872302284998 946.48612993586 34.392 2 0.076995222173948 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant', 'nc|ENSG00000112659|Q8IWT3-3|CUL9', 'CUL9|p.Q2357Gfs*83|2|0.22|ENSG00000112659|chr6:43222815-43222816|CA/G|frameshift_variant', 'ENSG00000112659|ENST00000252050|CUL9', 'ENST00000515773.5_1_6:43164260-43192180:+|nuORF'] 73609 21812 NGFPVFATV True PC9_epitope_Rep3 950.48616759934 950.48561496793 89.198 1 0.0769835330043376 0.003674075618208823 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 136349 7556 YHDDDNSVL True PC9_epitope_Rep4 1076.44106788172 1076.43996993586 36.439 2 0.07698070880834146 0.003674075618208823 0.9438714419765777 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 54512 18044 LAAEFLKQV True PC9_epitope_Rep3 1017.5858816406097 1017.58478993586 74.606 2 0.07697624289441642 0.003674075618208823 0.9438714419765777 ['ENSG00000135624|ENST00000258091|CCT7', 'ENST00000480489.5_1_2:73461506-73470269:+|nuORF', 'ENST00000461290.5_1_2:73461506-73471178:+|nuORF', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000406551.2_1_6:150201187-150201547:+|nuORF'] 51984 19224 KLAPPLVTL True PC9_epitope_Rep5 950.6164534929001 950.61534993586 78.985 2 0.07697578792773518 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 91532 13107 RPADVIFAT True PC9_epitope_Rep4 988.5341804209199 988.53308993586 58.31 2 0.07696930538336169 0.003674075618208823 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 115010 20958 TTLPGLLTV True PC9_epitope_Rep4 913.5484335027301 913.54732993586 88.776 2 0.07696661255781195 0.003674075618208823 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 44103 8795 ILMEHIHKL True PC9_epitope_Rep6 1132.64268532408 1132.64104490379 43.731 3 0.07696555169305735 0.003674075618208823 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 109823 19616 THLESLVEL True PC9_epitope_Rep1 1039.5549754351498 1039.5538699358601 80.28 2 0.07696213627192046 0.003674075618208823 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4'] 26755 19015 FLDGNEMTL True PC9_epitope_Rep6 1038.46919720586 1038.46808993586 85.785 2 0.0769603063486527 0.003674075618208823 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 60681 16658 LIVKEWNSV True PC9_epitope_Rep3 1086.60734536118 1086.6062499358602 69.21 2 0.07695367626368503 0.003674075618208823 0.9438714419765777 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 116738 21270 TYLDNGVVF True PC9_epitope_Rep5 1026.5022115862998 1026.5016749679298 86.866 1 0.07694844388796895 0.003674075618208823 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 8714 18591 AVDLTLPKV True PC9_epitope_Rep2 954.57498260374 954.57388993586 76.862 2 0.0769481435568372 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 90821 8622 RKSSLLTEL True NCI_RA007_Epitope_Rep4 1045.61315901761 1045.61206993586 39.947 2 0.07693650069514105 0.003674075618208823 0.9438714419765777 ['ENSG00000126756|ENST00000333119|UXT', 'nc|ENSG00000126756|Q9UBK9-2|UXT'] 128403 9703 VSDTVVEPYNA True H1975_Epitope_Rep3 1192.5611830143998 1192.56008993586 42.345 2 0.07693204220806361 0.003674075618208823 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 87183 17935 QSLEYLEQV True PC9_epitope_Rep6 1107.54480467427 1107.54370993586 81.614 2 0.07692776193494316 0.003674075618208823 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 48526 11550 KEFPGFLEN True NCI_RA007_Epitope_Rep4 1079.5287606873098 1079.52817496793 51.374 1 0.07692483596513845 0.003674075618208823 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 38785 9294 HHYSGNNIEL True PC9_epitope_Rep1 1182.5417849825 1182.54013490379 40.604 3 0.07690597714288404 0.003674075618208823 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 136492 16721 YHISLEHEIL True PC9_epitope_Rep2 1252.64518742188 1252.6435349037902 69.566 3 0.07690198812286839 0.003674075618208823 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant'] 1420 7634 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40194496793 34.316 1 0.07689847242035612 0.003674075618208823 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 104653 9447 SSYSGVTQL True H1975_Epitope_Rep1 940.4501760134401 940.44906993586 41.254 2 0.07689358727052205 0.003674075618208823 0.9438714419765777 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF'] 6084 12897 APMPPIIHA True PC9_epitope_Rep6 945.51060852537 945.50950993586 61.138 2 0.0768831517623548 0.003674075618208823 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 113019 14671 TPTPVPVV True PC9_epitope_Rep4 808.4694549060399 808.46890496793 64.366 1 0.07687564181617704 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 88752 10001 RDFVLPTAA True NCI_RA007_Epitope_Rep3 988.5341804209198 988.53308993586 46.431 2 0.07687233868260161 0.003674075618208823 0.9438714419765777 ['ENSG00000085491|ENST00000565488|SLC25A24'] 42584 8100 IESRTLAIA True NCI_RA007_Epitope_Rep2 972.5603951687599 972.55928993586 36.14 2 0.07687018377216592 0.003674075618208823 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 58805 12529 LFQEREHVLRL True PC9_epitope_Rep4 1438.80448202794 1438.80283490379 56.011 3 0.07686904790952609 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 123211 12912 VHLDSAVAL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 61.2 2 0.07685517701583909 0.003674075618208823 0.9438714419765777 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 120590 12103 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.4641549679301 51.637 1 0.0768438723072041 0.003674075618208823 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 96823 12580 SESGLITIA True H1975_Epitope_Rep2 889.4756624852901 889.47511496793 53.484 1 0.07682699321302654 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000115159|P43304-2|GPD2', 'ENSG00000115159|ENST00000438166|GPD2'] 129304 10884 VTDSGPTFNY True H1975_Epitope_Rep2 1099.4822044177101 1099.4816749679298 46.893 1 0.07682463303903658 0.003674075618208823 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'TOP2A|p.S1117C|1|0.12|ENSG00000131747|chr17:40398876-40398876|G/C|missense_variant', 'nc|ENSG00000131747|P11388-4|TOP2A'] 2188 12386 AENELGVVV True H1975_Epitope_Rep2 928.4865615221598 928.48601496793 52.731 1 0.0768243432392045 0.003674075618208823 0.9438714419765777 ['ENSG00000171311|ENST00000370902|EXOSC1'] 49457 8683 KITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1246.62273800457 1246.6216499358602 38.398 2 0.07682151416521375 0.003674075618208823 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 105342 10670 STVSSVTQV True PC9_epitope_Rep1 906.4658260775799 906.46472993586 45.932 2 0.0768184824111801 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1'] 113606 6998 TRATEGMVVA True PC9_epitope_Rep2 1033.5226297610498 1033.5215299358601 32.315 2 0.07680352509833276 0.003674075618208823 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 105391 9624 SVADTVARV True PC9_epitope_Rep2 916.4977949121999 916.49668993586 42.36 2 0.07680332432412176 0.003674075618208823 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 108958 7580 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46908993586 34.149 2 0.07679074359291851 0.003674075618208823 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 11767 14814 DHIHIIAL True PC9_epitope_Rep4 930.52870111766 930.52760993586 64.92 2 0.07678611760387849 0.003674075618208823 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 103718 5182 SREESAGPAL True PC9_epitope_Rep2 1015.4934378077497 1015.49234993586 25.321 2 0.07678508079355857 0.003674075618208823 0.9438714419765777 ['ENST00000354336.7_1_22:21271986-21272097:+|nuORF'] 73758 8270 NHAPSVQI True PC9_epitope_Rep5 864.44536541652 864.44426993586 36.753 2 0.0767731973008401 0.003674075618208823 0.9438714419765777 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 140366 13198 YYEKLHTYF True PC9_epitope_Rep4 1262.5971746003 1262.59552490379 58.666 3 0.07676737256192902 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 54088 15639 KYMDINFDF True NCI_RA007_Epitope_Rep5 1191.52704643515 1191.5259499358601 66.863 2 0.07676343374718206 0.003674075618208823 0.9438714419765777 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G', 'ENSG00000176658|ENST00000318217|MYO1D'] 28127 10655 FRIEQKTTL True PC9_epitope_Rep1 1134.63970811862 1134.63805490379 45.875 3 0.07676314139046991 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK', 'ENST00000508867.5_1_5:74842847-74877278:+|nuORF', 'ENST00000506928.5_1_5:74842847-74879138:+|nuORF'] 25390 20354 FEILPGLSV True H1975_Epitope_Rep2 973.54843350273 973.54732993586 84.35 2 0.07675181915530331 0.003674075618208823 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 138797 12825 YSDFPFHEDY True H1975_Epitope_Rep3 1318.51423282198 1318.5131299358602 54.551 2 0.07674566418419086 0.003674075618208823 0.9438714419765777 ['ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF'] 40187 8812 HRFPTVAV True PC9_epitope_Rep6 925.5133854066898 925.5122899358599 43.805 2 0.07670220042979513 0.003674075618208823 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 986 6891 AEAEAGVAV True H1975_Epitope_Rep2 815.4024975450299 815.40194496793 31.427 1 0.0766988716438748 0.003674075618208823 0.9438714419765777 ['ENSG00000178685|ENST00000313028|PARP10', 'ENST00000528580.1_1_8:145060208-145060527:-|nuORF'] 37254 13720 GVVGEVTQV True PC9_epitope_Rep4 886.47599683846 886.47488993586 60.664 2 0.07669668128821958 0.003674075618208823 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 73611 20933 NGFPVFATV True PC9_epitope_Rep4 950.48616759934 950.48561496793 88.679 1 0.07669370005598937 0.003674075618208823 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 90701 4635 RKMAQAVTL True NCI_RA007_Epitope_Rep5 1016.5800850675199 1016.57898993586 24.506 2 0.07668640493179778 0.003674075618208823 0.9438714419765777 ['ENSG00000157978|ENST00000374338|LDLRAP1', 'LDLRAP1|p.S202Pfs*2|1|0.48|ENSG00000157978|chr1:25563141-25563141|T/-|frameshift_variant', 'ENST00000488127.1_1_1:25880414-25890333:+|nuORF'] 138871 14452 YSDPSVLYM True H1975_Epitope_Rep2 1073.47394823313 1073.47284993586 60.745 2 0.07667947793463434 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Cfs*12|1|0.2|ENSG00000068024|chr2:239053582-239053591|CAGGCAGCGC/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF'] 38602 10153 HHIGDRSLSL True PC9_epitope_Rep5 1133.59415490853 1133.5924949037899 44.04 3 0.07666904942415095 0.003674075618208823 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF'] 102976 7066 SQIQEFKEA True PC9_epitope_Rep6 1078.5294889632999 1078.52838993586 36.203 2 0.07666606638323371 0.003674075618208823 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 47674 12008 IYPQVLHSL True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 52.849 2 0.0766560820284859 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 102312 6563 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48104993586 30.05 2 0.07665225660574773 0.003674075618208823 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 26277 18169 FIDDANYSV True PC9_epitope_Rep2 1042.4607406971402 1042.46017496793 75.19 1 0.0766445524745058 0.003674075618208823 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 91854 8771 RPNPPPVSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 38.578 2 0.07664418424224839 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 18828 9980 ELEEDFIK True H1975_Epitope_Rep3 1021.4967918526899 1021.49568993586 43.424 2 0.07663923543857988 0.003674075618208823 0.9438714419765777 ['ENSG00000103187|ENST00000262428|COTL1', 'ENST00000567278.1_1_16:84600453-84600705:-|nuORF'] 108695 8181 TELVEHITA True H1975_Epitope_Rep2 1011.52367530687 1011.52256993586 36.419 2 0.0766250943554414 0.003674075618208823 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172'] 47472 14610 IYKDSSTFL True PC9_epitope_Rep3 1072.5440763982801 1072.5429699358601 61.329 2 0.07661168528738174 0.003674075618208823 0.9438714419765777 ['ENSG00000145388|ENST00000388822|METTL14'] 75316 18137 NPVDILTYV True H1975_Epitope_Rep1 1032.54916177872 1032.5485749679299 75.564 1 0.0765977935044047 0.003674075618208823 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 4377 5979 AIQNPTMINK True NCI_RA007_Epitope_Rep3 1128.59612905448 1128.59502993586 30.499 2 0.07658452018398249 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 38815 11300 HIDPNFASL True NCI_RA007_Epitope_Rep4 1012.4977949122 1012.49668993586 50.362 2 0.07658248449754984 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000442060.7_1_5:118860916-118866997:+|nuORF'] 8161 10216 ATFTGILGK True NCI_RA007_Epitope_Rep4 906.5174677276199 906.51636993586 46.152 2 0.07657914505097045 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000167995|O76090-3|BEST1', 'ENST00000534553.5_1_11:61722629-61730618:+|nuORF'] 110044 18230 THYDHVLIEL True PC9_epitope_Rep1 1238.6295373577398 1238.62789490379 74.912 3 0.0765773812382384 0.003674075618208823 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 70899 14023 MEIPTTIQC True H1975_Epitope_Rep2 1034.47765371458 1034.4770749679299 59.089 1 0.07655837029405894 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 132591 12333 VYPPPHQVF True PC9_epitope_Rep2 1082.5549158654999 1082.55380993586 52.751 2 0.07655172321750725 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 46784 12537 IVDEAIYY True H1975_Epitope_Rep2 984.4804135125601 984.47930993586 53.317 2 0.07655023203206929 0.003674075618208823 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 97626 7500 SHANSAVVL True PC9_epitope_Rep1 896.47158016436 896.47048993586 33.666 2 0.07654958084833395 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 70527 18481 LYTGTVSSF True PC9_epitope_Rep1 973.47566248529 973.47456993586 75.878 2 0.07653205512996503 0.003674075618208823 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 26063 9174 FHDPDSAVV True PC9_epitope_Rep4 985.4505103666099 985.44940993586 42.883 2 0.07652396912415599 0.003674075618208823 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 35763 21142 GTVEQIVYL True PC9_epitope_Rep1 1020.5491617787197 1020.5485749679301 86.154 1 0.07652118862882079 0.003674075618208823 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 72200 11661 MRSDTPAML True PC9_epitope_Rep5 1020.47323704048 1020.47212993586 49.85 2 0.07651845621611303 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 13895 6217 DRDPASGTAL True PC9_epitope_Rep6 1001.47778774361 1001.47668993586 32.383 2 0.07651585042640334 0.003674075618208823 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 42006 14943 IEDPLIVTP True H1975_Epitope_Rep3 995.55391280599 995.55280993586 62.865 2 0.07650722829617417 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.P626Lfs*11|1|0.21|ENSG00000120539|chr10:27170834-27170834|C/-|frameshift_variant'] 127622 14474 VRDGATLIL True PC9_epitope_Rep2 956.5654805492 956.56438993586 60.944 2 0.07649858882337808 0.003674075618208823 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 106068 19057 SVLVSVSEV True PC9_epitope_Rep2 917.50696261357 917.50641496793 78.668 1 0.07649845826765839 0.003674075618208823 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 25385 20158 FEILPGLSV True H1975_Epitope_Rep1 973.54843350273 973.54788496793 83.887 1 0.07649807893895365 0.003674075618208823 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 2469 6329 AEQPPHLTP True H1975_Epitope_Rep3 988.4977949122 988.49668993586 29.336 2 0.07648936315567377 0.003674075618208823 0.9438714419765777 ['ENSG00000146733|ENST00000275605|PSPH'] 105970 19818 SVLGSLSSV True PC9_epitope_Rep2 847.4650978015901 847.46454496793 81.62 1 0.07648496598069425 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF'] 84734 14295 QHGGFVVTV True PC9_epitope_Rep3 942.4923156089399 942.49120993586 60.072 2 0.07648096542462936 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 9027 17897 AVIGDVIRV True PC9_epitope_Rep2 940.57056592964 940.56946993586 74.144 2 0.07646988083881294 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 105773 15497 SVIEQGGIQTV True PC9_epitope_Rep2 1129.59790287629 1129.5968099358602 64.882 2 0.07646631239782067 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'ENST00000566321.5_1_15:29046634-29050027:+|nuORF', 'ENST00000562423.5_1_15:29046609-29050027:+|nuORF'] 75752 11783 NRAEYYHLL True PC9_epitope_Rep4 1177.58800689893 1177.5869099358601 53.09 2 0.07646512685390564 0.003674075618208823 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 105683 9003 SVGKPLYL True H1975_Epitope_Rep2 875.5116540711899 875.51054993586 39.581 2 0.0764613073613786 0.003674075618208823 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 23910 22995 EYNAFFYSL True PC9_epitope_Rep5 1152.51277627 1152.51166993586 93.441 2 0.07644524305221943 0.003674075618208823 0.9438714419765777 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3', 'ENST00000491292.5_1_2:128018779-128018920:-|nuORF'] 32713 8966 GHSGPITSI True PC9_epitope_Rep3 867.4450310633501 867.44392993586 39.435 2 0.07644207047525833 0.003674075618208823 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF', 'PRPF19|p.F388L|1|0.17|ENSG00000110107|chr11:60898250-60898250|A/G|missense_variant'] 6295 2606 APRQPGLM[Oxidation]A True PC9_epitope_Rep2 955.4909360903898 955.48982993586 14.687 2 0.07644087906106617 0.003674075618208823 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 123641 18570 VILPKFTAV True PC9_epitope_Rep4 986.6164534929 986.61534993586 79.507 2 0.0764374775759171 0.003674075618208823 0.9438714419765777 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF'] 96302 7898 SEETPAISP True H1975_Epitope_Rep3 929.4341915961298 929.43364496793 35.353 1 0.07643550943402139 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 86923 8676 QRSDGPYAL True PC9_epitope_Rep2 1005.4879585044899 1005.48686993586 38.738 2 0.076434894700521 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 34476 20115 GQDGLYIGV True PC9_epitope_Rep5 920.4603467743199 920.4597949679301 82.419 1 0.07642689449913927 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 53828 13227 KYGALVNNF True PC9_epitope_Rep4 1024.53418042092 1024.53308993586 58.773 2 0.07642433039660242 0.003674075618208823 0.9438714419765777 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 99113 20353 SLAGGIIGV True PC9_epitope_Rep2 785.46470387877 785.4641549679301 83.71 1 0.0764121303125955 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 113828 4023 TREEGAQTL True PC9_epitope_Rep3 1003.4934378077497 1003.49234993586 20.587 2 0.07638839552849008 0.003674075618208823 0.9438714419765777 ['TRIM56|p.F497Sfs*35|1|0.12|ENSG00000169871|chr7:101088800-101088800|T/-|frameshift_variant', 'ENSG00000169871|ENST00000306085|TRIM56'] 35537 17262 GTIGLIHAI True PC9_epitope_Rep2 893.53345214493 893.5329049679301 71.658 1 0.07638558881238278 0.003674075618208823 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 60529 22661 LIPEYLNFI True PC9_epitope_Rep4 1120.61684741572 1120.61574993586 95.395 2 0.07638300618311143 0.003674075618208823 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 101827 19449 SPILVATAV True PC9_epitope_Rep1 869.52221875489 869.52112993586 79.626 2 0.07638098637870916 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 22335 16710 ETEKFWMFY True H1975_Epitope_Rep2 1279.55834656343 1279.55724993586 69.511 2 0.07637335754807763 0.003674075618208823 0.9438714419765777 ['TMEM186|p.R61H|2|0.31|ENSG00000184857|chr16:8796412-8796412|C/T|missense_variant', 'ENSG00000184857|ENST00000333050|TMEM186'] 5928 12900 APHPPLSVV True PC9_epitope_Rep5 915.51780208079 915.51670993586 54.632 2 0.07637294945513742 0.003674075618208823 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 96404 9171 SEIDMNDIKA True NCI_RA007_Epitope_Rep4 1134.5226893307001 1134.5215899358602 42.116 2 0.07636417208904957 0.003674075618208823 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 21284 17027 ERIPDVAAL True PC9_epitope_Rep3 982.5447451046199 982.54364993586 70.65 2 0.07636318291937637 0.003674075618208823 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 76574 6626 NTDSPLRY True H1975_Epitope_Rep2 964.46140940348 964.4608649679301 30.395 1 0.07636241131853522 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF'] 97609 10118 SHAELETAL True PC9_epitope_Rep2 969.47672511445 969.47562993586 44.257 2 0.07636091127374359 0.003674075618208823 0.9438714419765777 ['GPC1|p.P538Rfs*15|1|0.17|ENSG00000063660|chr2:240466222-240466222|C/-|frameshift_variant', 'ENSG00000063660|ENST00000264039|GPC1', 'nc|ENSG00000063660|P35052-2|GPC1', 'ENST00000469694.5_1_2:241381745-241403123:+|nuORF'] 24015 23832 EYPFILDAF True PC9_epitope_Rep2 1113.5382627418498 1113.5371699358602 97.141 2 0.07634811738598407 0.003674075618208823 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 22181 8248 ETDAQSITY True H1975_Epitope_Rep2 1026.4505699362599 1026.4499749679298 36.679 1 0.07634677355438559 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3'] 132794 16510 VYSQIPAAVKL True PC9_epitope_Rep4 1187.6914093383098 1187.6903099358601 71.476 2 0.0763158674760187 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 107418 16416 SYTSGLETL True PC9_epitope_Rep6 969.4654917244101 969.46438993586 75.549 2 0.07630671660644035 0.003674075618208823 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 14084 17711 DSDPFSSFY True H1975_Epitope_Rep3 1063.41345615155 1063.4128749679298 74.044 1 0.07629932048347586 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF', 'ENST00000496688.1_1_9:123589031-123593637:-|nuORF', 'PSMD5|p.L270V|1|0.16|ENSG00000095261|chr9:120826771-120826771|G/C|missense_variant'] 131998 14112 VYGPLPQSF True NCI_RA007_Epitope_Rep4 1006.5123823471798 1006.51187496793 61.562 1 0.07628910826377955 0.003674075618208823 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 104146 6133 SSAGPGLLK True NCI_RA007_Epitope_Rep2 828.4705175352 828.46942993586 28.463 2 0.07628034549723314 0.003674075618208823 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 74053 9720 NHSLVTSDL True PC9_epitope_Rep4 984.4876241513201 984.48652993586 45.025 2 0.0762778974001188 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4'] 114467 5009 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59746993586 24.35 2 0.07627345871911338 0.003674075618208823 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 34468 20189 GQDGLYIGV True PC9_epitope_Rep1 920.4603467743199 920.4597949679301 82.486 1 0.07627279436121605 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 9364 16946 AVTVMFDKV True PC9_epitope_Rep1 1008.5314035395999 1008.53030993586 70.007 2 0.07626471884738507 0.003674075618208823 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 72788 21172 NAFSENFLEV True PC9_epitope_Rep4 1168.5400536470001 1168.53894993586 89.601 2 0.07626307574656414 0.003674075618208823 0.9438714419765777 ['ENSG00000170836|ENST00000305921|PPM1D', 'ENST00000392995.7_1_17:58734367-58740910:+|nuORF'] 9170 13645 AVNPKFLAV True PC9_epitope_Rep6 957.5647522732099 957.56364993586 64.26 2 0.07625870424224508 0.003674075618208823 0.9438714419765777 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B'] 116865 22288 TYNMVLNLL True PC9_epitope_Rep4 1079.56851732431 1079.56740993586 93.969 2 0.07625345129058934 0.003699843668577384 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 60073 15152 LHSLGSVSL True PC9_epitope_Rep3 911.50763131991 911.50652993586 63.423 2 0.0762411542801482 0.003699843668577384 0.9438714419765777 ['TNS4-CCR7|1|fusion', 'ENSG00000131746|ENST00000254051|TNS4'] 116457 5447 TYAEKLHRL True PC9_epitope_Rep2 1129.62439240765 1129.6227449037901 26.346 3 0.07623958565464684 0.003699843668577384 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 27932 10887 FQPEANPSHL True PC9_epitope_Rep1 1138.54072235334 1138.5396299358601 46.761 2 0.07621849296772104 0.0037258018290299887 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'ENST00000261509.10_1_4:169846154-169847533:+|nuORF'] 8563 18414 AVAAVLTQV True PC9_epitope_Rep1 870.5174677276199 870.51636993586 75.62 2 0.07618962013129889 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 115202 6929 TVAVGVIK True NCI_RA007_Epitope_Rep2 785.50108938749 785.49998993586 31.572 2 0.07618203720793151 0.0037489260888807895 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 112849 16957 TPMSVLQQA True PC9_epitope_Rep5 973.49026700361 973.48916993586 70.244 2 0.07617701507440558 0.0037489260888807895 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant'] 76207 11260 NRWKQSVEL True PC9_epitope_Rep5 1158.61455599994 1158.6129149037902 48.302 3 0.07617502204670863 0.0037489260888807895 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 25977 19581 FGYPFRLNEA True PC9_epitope_Rep2 1212.5927579262 1212.5916699358602 80.699 2 0.07617365320768528 0.0037489260888807895 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 1698 5402 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41284496793 25.811 1 0.07617092413801625 0.0037489260888807895 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 113603 8371 TRATEGMVV True PC9_epitope_Rep1 962.4855159763398 962.48440993586 37.035 2 0.07616758926539775 0.0037489260888807895 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 29965 22549 FYAHIIPFL True PC9_epitope_Rep5 1119.6117024656298 1119.61060993586 91.74 2 0.07616337103993363 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000131238|P50897-2|PPT1', 'ENSG00000131238|ENST00000642050|PPT1'] 40066 15041 HRALVAVLL True PC9_epitope_Rep6 990.6338348925399 990.63272993586 69.894 2 0.07616155614688162 0.0037489260888807895 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1', 'GCN1L1-CCND2|1|fusion'] 86379 17579 QQLGTAVEL True PC9_epitope_Rep5 957.5131106231698 957.51200993586 72.626 2 0.07615160548781831 0.0037489260888807895 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 46742 19884 IVAPGTFEV True PC9_epitope_Rep2 931.5014833103099 931.50038993586 81.877 2 0.0761429781847538 0.0037489260888807895 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 95125 12686 RYVPRASYF True PC9_epitope_Rep1 1157.5981776598098 1157.59654490379 53.668 3 0.076135184598307 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 116361 17937 TVYEGFISA True PC9_epitope_Rep6 985.4756624852898 985.47456993586 81.621 2 0.0761296045409172 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 98962 10932 SKFPTQISL True NCI_RA007_Epitope_Rep3 1019.5651461960299 1019.56404993586 50.085 2 0.0761214786849613 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 100447 23240 SLPEVLPIL True PC9_epitope_Rep1 979.5953836951498 979.59428993586 94.183 2 0.07611182187354044 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 129380 10711 VTEEPQRLFY True H1975_Epitope_Rep3 1280.64010204144 1280.63900993586 46.277 2 0.07610577603473784 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000104081|Q96LC9-3|BMF', 'nc|ENSG00000104081|Q96LC9-2|BMF', 'ENSG00000104081|ENST00000354670|BMF'] 108962 7596 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46963496793 34.21 1 0.076104567719818 0.0037489260888807895 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 32012 6019 GETVPAPSA True H1975_Epitope_Rep2 827.40249754503 827.40194496793 28.13 1 0.07610108550805071 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 88894 6649 REAQSFISA True NCI_RA007_Epitope_Rep3 1007.5036085686298 1007.50250993586 33.223 2 0.07609679593617094 0.0037489260888807895 0.9438714419765777 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 91535 14695 RPADVIFAT True PC9_epitope_Rep5 988.5341804209199 988.53308993586 61.527 2 0.07609019155154978 0.0037489260888807895 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 76510 10930 NTDLGNDLY True H1975_Epitope_Rep1 1023.4509042894299 1023.4498099358599 47.005 2 0.07608793577627082 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 137991 20708 YQAPDIDVQL True PC9_epitope_Rep2 1160.57135377528 1160.57077496793 85.089 1 0.07608439602124445 0.0037489260888807895 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 94418 16389 RYFENPQVI True PC9_epitope_Rep1 1164.5927579262 1164.5916699358602 67.863 2 0.07607350654716322 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 139412 8798 YTEGAELVD True H1975_Epitope_Rep1 995.4447562798299 995.4442049679301 38.767 1 0.07606943673546941 0.0037489260888807895 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 6828 18185 AQIDGTLSTI True PC9_epitope_Rep2 1017.5342399905701 1017.5336749679301 75.256 1 0.0760685272803184 0.0037489260888807895 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 125984 10025 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.49088993586 43.887 2 0.07605979862898474 0.0037489260888807895 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 11873 10174 DHNSLDSSL True PC9_epitope_Rep5 986.4305031980201 986.42940993586 44.121 2 0.07604540243755523 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 115212 8712 TVAVPLVGK True NCI_RA007_Epitope_Rep4 882.5538532363399 882.55274993586 40.302 2 0.07603069523277492 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 97443 11913 SGGPVVVL True H1975_Epitope_Rep2 726.42759009406 726.4270449679301 50.903 1 0.07601406178461823 0.0037489260888807895 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 83243 15430 QADLINELY True H1975_Epitope_Rep1 1077.53423999057 1077.5331499358601 64.622 2 0.07600381497175461 0.0037489260888807895 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 31662 6923 GEIASFDKA True H1975_Epitope_Rep2 936.4552613938799 936.45416993586 31.55 2 0.07598936058367141 0.003772014255612497 0.9438714419765777 ['ENSG00000034510|ENST00000233143|TMSB10'] 106074 19333 SVLVSVSEV True PC9_epitope_Rep5 917.50696261357 917.50586993586 79.408 2 0.07597426692451052 0.003772014255612497 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 132553 22557 VYPGYYLTF True PC9_epitope_Rep5 1121.54334812229 1121.5422499358601 91.769 2 0.0759720156327481 0.003772014255612497 0.9438714419765777 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 48495 7720 KEFIKIVEA True NCI_RA007_Epitope_Rep3 1075.62774645259 1075.62664993586 37.49 2 0.07594662078783891 0.003772014255612497 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 59870 9111 LHGPSGSAF True PC9_epitope_Rep1 871.4188163155101 871.41770993586 39.897 2 0.07593778525927199 0.003772014255612497 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 97630 7533 SHANSAVVL True PC9_epitope_Rep3 896.47158016436 896.47048993586 33.977 2 0.0759327252872896 0.003772014255612497 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 13878 7494 DRDPASGTAL True PC9_epitope_Rep1 1001.47778774361 1001.47668993586 33.645 2 0.07592372399414564 0.003772014255612497 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 126001 10300 VPAGGAVAVSA True PC9_epitope_Rep5 897.4919812557699 897.49088993586 44.607 2 0.07590685694683251 0.003772014255612497 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 127443 18266 VQSGLRILL True PC9_epitope_Rep4 997.6284151589299 997.62730993586 78.33 2 0.07589665719693588 0.003772014255612497 0.9438714419765777 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 21645 12985 ERTPGVLL True PC9_epitope_Rep5 883.5127167003499 883.51160993586 54.956 2 0.07588840742703706 0.003772014255612497 0.9438714419765777 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'nc|ENSG00000185684|Q6ZTU2-2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-6|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-4|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-5|EP400P1'] 39627 9849 HPNQPLTITA True PC9_epitope_Rep2 1090.57710786206 1090.5760099358602 43.219 2 0.07587978953445519 0.003772014255612497 0.9438714419765777 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 93486 5460 RSHQVSVTL True NCI_RA007_Epitope_Rep4 1025.56179215109 1025.5606899358602 27.585 2 0.07587282150782748 0.003772014255612497 0.9438714419765777 ['ENSG00000112343|ENST00000357085|TRIM38'] 30617 7255 GALALEEK True PC9_epitope_Rep5 829.4545331178899 829.45342993586 32.87 2 0.07586660064831713 0.003772014255612497 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 3227 4741 AGFAGDDAPR True H1975_Epitope_Rep3 975.4410083120698 975.43990993586 23.361 2 0.07586557991873896 0.003772014255612497 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 40844 10467 HVLEEVQQV True PC9_epitope_Rep4 1079.56112344475 1079.56002993586 47.973 2 0.07582363432304605 0.003772014255612497 0.9438714419765777 ['ENSG00000136026|ENST00000378026|CKAP4'] 88960 3814 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 19.27 2 0.0758200881727834 0.003772014255612497 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 53842 11402 KYGNLSNYL True NCI_RA007_Epitope_Rep2 1070.53965972418 1070.53856993586 48.941 2 0.07581998862016659 0.003772014255612497 0.9438714419765777 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'FLT1|p.C1110Afs*4|1|0.45|ENSG00000102755|chr13:28317556-28317556|A/-|frameshift_variant', 'ENST00000451650.1_1_3:46184698-46185163:-|nuORF'] 114918 8429 TTEVHPELY True H1975_Epitope_Rep2 1087.5185899264297 1087.51748993586 37.375 2 0.07581338718318988 0.003772014255612497 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 102608 22082 SQAPFIVAL True PC9_epitope_Rep5 944.5331177917599 944.53202993586 89.968 2 0.07579493874758426 0.003772014255612497 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 60531 23563 LIPEYLNFI True PC9_epitope_Rep5 1120.61684741572 1120.61574993586 95.621 2 0.07576603957700957 0.003772014255612497 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 38613 12348 HHITVKINEL True PC9_epitope_Rep5 1202.6771562565 1202.67550490379 52.49 3 0.07575550111531384 0.003772014255612497 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 37980 10799 HEGLPGLAV True H1975_Epitope_Rep2 891.4814165720699 891.48030993586 46.568 2 0.07572265106206054 0.003772014255612497 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 86020 14767 QPITPGPSI True PC9_epitope_Rep5 908.4967322830399 908.49562993586 61.8 2 0.07571688518214208 0.003772014255612497 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000602503.1_1_1:23408727-23408946:+|nuORF'] 102321 5686 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 27.258 2 0.07570837524129466 0.003772014255612497 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 132799 15664 VYSQIPAAVKL True PC9_epitope_Rep6 1187.6914093383098 1187.6903099358601 72.457 2 0.0757074103757921 0.003772014255612497 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 31371 5517 GEAPPSAPP True H1975_Epitope_Rep3 821.3919328613299 821.39082993586 26.269 2 0.07569992911386039 0.003772014255612497 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 71066 5294 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 25.419 2 0.07569885841401312 0.003772014255612497 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 44782 18291 IPTNIPGL True PC9_epitope_Rep6 823.4803539429099 823.47924993586 82.999 2 0.07569349057885248 0.003772014255612497 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 106550 22540 SVVTSIFGV True PC9_epitope_Rep1 907.5014833103099 907.5009349679301 91.502 1 0.07568977512463212 0.003772014255612497 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 35769 21075 GTVEQIVYL True PC9_epitope_Rep5 1020.5491617787197 1020.5485749679301 86.125 1 0.07568342252868618 0.003772014255612497 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 17616 6406 EHNDLQYAA True PC9_epitope_Rep4 1059.46213767947 1059.46104993586 31.731 2 0.07568101351845911 0.0037969416415270987 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 29069 9274 FTPNNIKQV True PC9_epitope_Rep2 1059.57129420563 1059.57018993586 41.013 2 0.07567453866772704 0.0037969416415270987 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 132014 16671 VYGPMKNYL True PC9_epitope_Rep5 1083.5423025764699 1083.54120993586 69.129 2 0.07566677969821185 0.0037969416415270987 0.9438714419765777 ['ENSG00000166825|ENST00000300060|ANPEP'] 25223 11727 FEAPSPLGA True H1975_Epitope_Rep1 887.4388830537498 887.43833496793 50.1 1 0.07566470260775628 0.0037969416415270987 0.9438714419765777 ['ENST00000477110.6_1_X:295104-295341:-|nuORF', 'nc|ENSG00000292327|Q9Y5P8-2|PPP2R3B', 'ENSG00000167393|ENST00000390665|PPP2R3B'] 213 22071 AAFPGASLYL True PC9_epitope_Rep1 1008.5280324113198 1008.52692993586 89.705 2 0.07564826285760644 0.0037969416415270987 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 26732 21643 FLDGNELTL True PC9_epitope_Rep3 1020.51277627 1020.51166993586 88.548 2 0.07564646660646022 0.0037969416415270987 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 9708 9164 AYINKVEEL True NCI_RA007_Epitope_Rep3 1077.57062549929 1077.5695299358601 43.133 2 0.07564394992447392 0.0037969416415270987 0.9438714419765777 ['ENSG00000155368|ENST00000355857|DBI', 'nc|ENSG00000155368|P07108-3|DBI', 'nc|ENSG00000155368|P07108-2|DBI', 'nc|ENSG00000155368|P07108-4|DBI', 'nc|ENSG00000155368|P07108-5|DBI'] 39005 5637 HKFAGDKGYL True NCI_RA007_Epitope_Rep2 1134.5821932425 1134.58054490379 26.54 3 0.07564069084851914 0.0037969416415270987 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10', 'ENST00000478574.5_1_1:151956596-151958706:-|nuORF', 'ENST00000478348.1_1_1:151957748-151958706:-|nuORF'] 47194 19127 IYANTINTF True PC9_epitope_Rep1 1055.52876068731 1055.52766993586 78.363 2 0.07563088364400818 0.0037969416415270987 0.9438714419765777 ['nc|ENSG00000115380|Q12805-5|EFEMP1', 'nc|ENSG00000115380|Q12805-2|EFEMP1', 'nc|ENSG00000115380|Q12805-4|EFEMP1', 'nc|ENSG00000115380|Q12805-3|EFEMP1', 'ENSG00000115380|ENST00000355426|EFEMP1'] 24489 16690 FAIPLIEKL True H1975_Epitope_Rep3 1042.64266824074 1042.6415699358602 69.72 2 0.07562518026521821 0.0037969416415270987 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 96029 10052 SEALPSDIAA True H1975_Epitope_Rep1 972.47639076128 972.47528993586 43.604 2 0.07562218384941514 0.0037969416415270987 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 44081 19412 ILLPRIIEA True PC9_epitope_Rep4 1036.6644663144798 1036.6633699358601 82.779 2 0.07560769580481137 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 203 9349 AAFGGTFKKV True PC9_epitope_Rep1 1024.5705659296398 1024.56946993586 40.818 2 0.07559034332133331 0.0038026748066326927 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 26754 21070 FLDGNEMTL True PC9_epitope_Rep5 1038.46919720586 1038.46808993586 86.106 2 0.07558184543930381 0.0038026748066326927 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 124564 4586 VLGPTPVQK True NCI_RA007_Epitope_Rep3 937.55966689277 937.55856993586 24.933 2 0.07557710531453403 0.0038026748066326927 0.9438714419765777 ['ENSG00000166225|ENST00000549921|FRS2'] 105905 21427 SVLDGLLYV True PC9_epitope_Rep6 977.54334812229 977.54279496793 95.295 1 0.07557599207108501 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 72210 8372 MRSPQMVSA True PC9_epitope_Rep5 1005.47357139365 1005.47246993586 37.145 2 0.0755591476780959 0.0038026748066326927 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 65215 7476 LSEAKLDEY True H1975_Epitope_Rep1 1066.51825557326 1066.51714993586 33.755 2 0.07555457001850507 0.0038026748066326927 0.9438714419765777 ['ENSG00000089902|ENST00000262241|RCOR1'] 2421 4447 AEQLRDEEVHA True H1975_Epitope_Rep2 1295.6105928183101 1295.6089349037902 22.217 3 0.07553814148099276 0.0038026748066326927 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 67246 17442 LTDLVDDNYFY True H1975_Epitope_Rep2 1376.6136125100802 1376.61250993586 72.382 2 0.07552964714583316 0.0038026748066326927 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 84613 6073 QHDPSAVAV True PC9_epitope_Rep3 922.4508447197799 922.44974993586 28.408 2 0.07552866460431015 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 119845 6365 VEVPETPKA True H1975_Epitope_Rep3 968.5178616504398 968.51731496793 29.467 1 0.07552332416455285 0.0038026748066326927 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2'] 135591 8166 YEELQSLAGK True H1975_Epitope_Rep1 1136.5713537752797 1136.57077496793 36.352 1 0.07551316006165557 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__H-INV:HIT000292931'] 12364 18404 DIYLPIANVA True H1975_Epitope_Rep2 1087.59136094387 1087.59026993586 76.342 2 0.07551194174756579 0.0038026748066326927 0.9438714419765777 ['ENSG00000120837|ENST00000240055|NFYB'] 40445 7614 HSDPESDFY True H1975_Epitope_Rep2 1095.41451878071 1095.41397496793 34.241 1 0.07551120479985311 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000119760|O94864-2|SUPT7L', 'ENSG00000119760|ENST00000337768|SUPT7L'] 74006 5455 NHQKDIQVL True PC9_epitope_Rep4 1093.58800689893 1093.5869099358601 27.72 2 0.07551084120125111 0.0038026748066326927 0.9438714419765777 ['ENSG00000153561|ENST00000283632|RMND5A'] 112241 17330 TLYERGFENI True PC9_epitope_Rep1 1240.6088019131598 1240.6077099358602 71.474 2 0.07550716035068576 0.0038026748066326927 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 86139 8735 QPRYPVNSV True PC9_epitope_Rep1 1058.55089311422 1058.5497899358602 38.437 2 0.07550285263040658 0.0038026748066326927 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 132758 17679 VYSPHVLNL True PC9_epitope_Rep1 1040.5654805492 1040.5643899358602 72.797 2 0.0755003305176572 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 86363 9336 QQLGKVVQV True PC9_epitope_Rep2 997.5920296502098 997.59092993586 41.249 2 0.07550000006876036 0.0038026748066326927 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 22374 12852 ETERFRELLLY True H1975_Epitope_Rep3 1467.7721788401498 1467.7705349037901 54.657 3 0.07547969785095676 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 56937 9708 LEDSPVISA True H1975_Epitope_Rep2 929.47057710485 929.47002496793 42.325 1 0.07546419395710069 0.0038026748066326927 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 35024 14339 GRAPQVLVL True PC9_epitope_Rep4 951.5865503469499 951.58544993586 63.057 2 0.07542321683963377 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 49345 4705 KIERQKILK True NCI_RA007_Epitope_Rep4 1154.7499272739399 1154.7482849037901 24.527 3 0.07541307253652259 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000132274|Q8IYM9-2|TRIM22'] 1415 12831 AEEGGFAVVC True H1975_Epitope_Rep2 980.4273323938799 980.4267849679301 54.463 1 0.07540751424493672 0.0038026748066326927 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 31356 5305 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 25.46 2 0.0754016912994597 0.0038026748066326927 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 102731 20981 SQDYPTLAF True PC9_epitope_Rep2 1040.48147614172 1040.48097496793 86.154 1 0.07539491798340003 0.0038026748066326927 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 6187 8392 APQEATLGA True PC9_epitope_Rep1 856.4290466460399 856.4284949679301 37.116 1 0.0753938567194824 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 63450 15681 LPGVDALSNI True H1975_Epitope_Rep1 997.5444107514501 997.5438649679301 65.605 1 0.07538849318602649 0.0038026748066326927 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 25207 9021 FEADPPGQVAA True H1975_Epitope_Rep2 1100.51383889916 1100.51274993586 39.652 2 0.07538811541675293 0.0038026748066326927 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 129838 18986 VTLGPVPEI True PC9_epitope_Rep6 923.53278343859 923.5322349679301 85.673 1 0.07537548713568448 0.0038026748066326927 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 24275 14352 FAAGETFL True H1975_Epitope_Rep2 854.41741933318 854.4168749679301 60.355 1 0.07537474648956152 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 43451 11014 IHSSIVSTL True PC9_epitope_Rep6 955.5338460677501 955.53274993586 53.263 2 0.0753743139115941 0.0038026748066326927 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 73571 19955 NFTNVAATF True PC9_epitope_Rep2 983.4712458111899 983.47014993586 82.156 2 0.07537304849461654 0.0038026748066326927 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 31888 5376 GEQEPPPPP True H1975_Epitope_Rep3 946.4396113297398 946.4390649679301 25.745 1 0.07535811437010337 0.0038026748066326927 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 2251 12007 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.51128993586 51.346 2 0.07535534328641787 0.0038026748066326927 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 102829 18896 SQFPGAITL True PC9_epitope_Rep6 932.4967322830399 932.49618496793 85.33 1 0.07534668743653841 0.0038026748066326927 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 31836 16519 GENPLQVLV True H1975_Epitope_Rep2 967.5338460677499 967.53329496793 68.76 1 0.07534653757150593 0.0038026748066326927 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 107204 22685 SYPDLLPTF True PC9_epitope_Rep2 1051.52261267771 1051.52207496793 92.751 1 0.07534653074366715 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 96416 11001 SEIDQVVPAA True H1975_Epitope_Rep2 1027.5185899264297 1027.51807496793 47.342 1 0.0753457077033052 0.0038026748066326927 0.9438714419765777 ['ENSG00000162607|ENST00000339950|USP1'] 108331 3366 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 17.665 2 0.07534056653131976 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 114077 9140 TRQTGIVL True PC9_epitope_Rep2 886.5236157372198 886.52250993586 40.498 2 0.07532060959183987 0.0038026748066326927 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 1414 11352 AEEGGFAVV True H1975_Epitope_Rep2 877.4181476091699 877.4175949679301 48.715 1 0.07531945250945199 0.0038026748066326927 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 130562 22106 VTYPGELLL True PC9_epitope_Rep3 1003.5589981864299 1003.55790993586 90.327 2 0.07531074534880056 0.0038026748066326927 0.9438714419765777 ['ENSG00000146386|ENST00000367660|ABRACL'] 27318 15409 FMDPASALY True H1975_Epitope_Rep1 1013.45281886573 1013.4522749679301 64.541 1 0.0753103318980782 0.0038026748066326927 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 47788 6739 IYQRHVYNL True NCI_RA007_Epitope_Rep4 1204.6352914445197 1204.6341899358601 32.543 2 0.07531005677187054 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 32446 13830 GGHGPSFPL True PC9_epitope_Rep1 867.42390169595 867.42280993586 58.04 2 0.07530458105294138 0.0038026748066326927 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 93768 9514 RTSTGIIGV True PC9_epitope_Rep4 902.5185303567799 902.51742993586 44.206 2 0.07530102811536218 0.0038026748066326927 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 97791 13924 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.4914349679301 58.394 1 0.07530066052860901 0.0038026748066326927 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 107272 13393 SYQKVIELF True NCI_RA007_Epitope_Rep3 1125.6070110080097 1125.6059099358602 59.957 2 0.07529846174349451 0.0038026748066326927 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 31908 6870 GEQRSRFLAV True H1975_Epitope_Rep3 1161.6254550368099 1161.62380490379 31.384 3 0.0752936121130568 0.0038026748066326927 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 91528 13779 RPADVIFAT True PC9_epitope_Rep2 988.5341804209199 988.53308993586 58.285 2 0.07529033661202102 0.0038026748066326927 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 98400 21677 SIIGRLLEV True PC9_epitope_Rep1 998.6124307416198 998.61132993586 88.208 2 0.0752848023832741 0.0038026748066326927 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 88910 5268 RECTIEATA True NCI_RA007_Epitope_Rep1 992.4596951513198 992.45858993586 24.573 2 0.07527895093680384 0.0038026748066326927 0.9438714419765777 ['ENST00000502372.1_1_3:128889298-128890145:-|nuORF', 'nc|ENSG00000169714|P62633-7|CNBP', 'nc|ENSG00000169714|P62633-3|CNBP', 'nc|ENSG00000169714|P62633-2|CNBP', 'nc|ENSG00000169714|P62633-8|CNBP', 'nc|ENSG00000169714|P62633-5|CNBP', 'ENSG00000169714|ENST00000422453|CNBP', 'nc|ENSG00000169714|P62633-4|CNBP', 'nc|ENSG00000169714|P62633-6|CNBP'] 96659 10509 SENPSVYVP True H1975_Epitope_Rep3 990.4658260775799 990.46472993586 45.486 2 0.07527433440626312 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 51938 6690 KKVAAIEAL True NCI_RA007_Epitope_Rep2 941.5909670210499 941.58986993586 30.635 2 0.07526895876825465 0.0038026748066326927 0.9438714419765777 ['ENSG00000100380|ENST00000216218|ST13', 'nc|ENSG00000232150|Q8IZP2|ST13P4'] 138042 4392 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 23.338 2 0.07526806355370001 0.0038026748066326927 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 97841 11598 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.49088993586 55.727 2 0.07525884658001239 0.0038026748066326927 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 23243 10994 EVRESLAEL True PC9_epitope_Rep5 1044.54513902744 1044.5440499358601 47.277 2 0.07525847712196267 0.0038026748066326927 0.9438714419765777 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A'] 2229 7818 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.43850993586 35.052 2 0.07525420073492031 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 102542 12453 SQAIAFQQA True PC9_epitope_Rep2 962.4821448480601 962.48104993586 53.207 2 0.07525063178110271 0.0038026748066326927 0.9438714419765777 ['ZCRB1|p.W185Mfs*13|1|0.31|ENSG00000139168|chr12:42313168-42313169|-/T|frameshift_variant', 'ENSG00000139168|ENST00000266529|ZCRB1'] 2953 16028 AFGYYGPLR True PC9_epitope_Rep2 1042.5236157372199 1042.5225099358602 66.906 2 0.07524349745095166 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000112081|P84103-2|SRSF3', 'ENSG00000112081|ENST00000373715|SRSF3'] 7933 20048 ATDFGEALV True PC9_epitope_Rep1 921.4443623570098 921.44381496793 81.94 1 0.07524302247867473 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 35764 21140 GTVEQIVYL True PC9_epitope_Rep1 1020.5491617787197 1020.54806993586 86.145 2 0.07522798427504723 0.0038026748066326927 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 11896 4812 DHQQNSPTL True PC9_epitope_Rep4 1038.47303671634 1038.47192993586 25.085 2 0.07522657202949125 0.0038026748066326927 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1'] 119470 10806 VEQAFQTIA True H1975_Epitope_Rep2 1005.51311062317 1005.51200993586 46.594 2 0.07522639425443564 0.0038026748066326927 0.9438714419765777 ['ENSG00000075785|ENST00000265062|RAB7A'] 1242 2724 AEDLNTRVA True H1975_Epitope_Rep2 987.49852318819 987.4974299358599 14.566 2 0.0752244796296163 0.0038026748066326927 0.9438714419765777 ['ENST00000514548.1_1_5:114952016-114952166:-|nuORF', 'ENST00000503010.1_1_5:114951908-114961566:-|nuORF', 'nc|ENSG00000134970|Q9Y3B3-2|TMED7', 'ENSG00000134970|ENST00000456936|TMED7', 'nc|ENSG00000243414|Q86XR7-2|TICAM2'] 2026 7409 AELATRALP True NCI_RA007_Epitope_Rep5 940.5341804209199 940.53308993586 35.176 2 0.07522140488362172 0.0038026748066326927 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 116828 13430 TYMGHTGAVW True PC9_epitope_Rep2 1121.4964150132098 1121.4953099358602 56.94 2 0.0752173412882563 0.0038026748066326927 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32688150-32694122:+|nuORF', 'ENST00000489353.5_1_1:32688042-32691823:+|nuORF'] 7781 8294 ASVPKVETV True PC9_epitope_Rep2 928.52294703088 928.52184993586 37.265 2 0.0752014154026559 0.0038026748066326927 0.9438714419765777 ['ENSG00000100664|ENST00000216554|EIF5'] 71872 9262 MPNGDHIVSA True PC9_epitope_Rep1 1039.47567956863 1039.4745899358602 40.479 2 0.07519947074931621 0.0038026748066326927 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 20980 18983 ERADPLFL True PC9_epitope_Rep3 959.5076313199099 959.50652993586 78.241 2 0.07519907115495474 0.0038026748066326927 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 40758 7019 HVAKEILL True H1975_Epitope_Rep2 921.5647522732099 921.56364993586 31.924 2 0.07518440070701467 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'nc|ENSG00000170632|Q8N2F6-4|ARMC10', 'ENST00000313754.4_1_3:94225612-94226386:-|nuORF', 'nc|ENSG00000170632|Q8N2F6-3|ARMC10', 'nc|ENSG00000170632|Q8N2F6-5|ARMC10', 'nc|ENSG00000170632|Q8N2F6-6|ARMC10'] 9631 20608 AYGGAFYAF True PC9_epitope_Rep4 965.42831837005 965.4277649679301 87.422 1 0.07518374139149166 0.0038026748066326927 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 34857 9127 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42828993586 40.053 2 0.07517834016058222 0.0038026748066326927 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 137385 21524 YLLDLHSYL True PC9_epitope_Rep2 1135.59136094387 1135.59026993586 88.26 2 0.07517811381613039 0.0038026748066326927 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'MARCHF6|p.A560T|1|0.21|ENSG00000145495|chr5:10410263-10410263|G/A|missense_variant'] 98950 8779 SKAPVLTY True PC9_epitope_Rep4 877.49091862661 877.48982993586 41.28 2 0.07517358026342362 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-2|EFHC1', 'EFHC1|p.Q76R|1|0.4|ENSG00000096093|chr6:52424109-52424109|A/G|missense_variant'] 88362 19787 QYMKIISSF True PC9_epitope_Rep3 1115.5685173243098 1115.56740993586 81.341 2 0.07517260813420043 0.0038026748066326927 0.9438714419765777 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 69215 11769 LVNELTEFAK True NCI_RA007_Epitope_Rep2 1162.6233893481399 1162.6228749679299 50.377 1 0.07516453452735382 0.0038026748066326927 0.9438714419765777 ['CON__P02769'] 32454 13841 GGHGPSFPL True PC9_epitope_Rep5 867.42390169595 867.42280993586 58.26 2 0.07516035654967312 0.0038026748066326927 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 26117 11830 FHGAPLTV True PC9_epitope_Rep2 840.4493881678001 840.44828993586 50.835 2 0.07515239446248333 0.0038026748066326927 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 112863 11773 TPNRATFVV True PC9_epitope_Rep5 1003.5450794577899 1003.5439899358599 50.283 2 0.07513403220128118 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 2291 6609 AEPSRGPPLP True H1975_Epitope_Rep3 1019.5399940773498 1019.53888993586 30.373 2 0.07512503373940252 0.0038026748066326927 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 116359 20045 TVYEGFISA True PC9_epitope_Rep5 985.4756624852898 985.47511496793 82.157 1 0.07512498114237104 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 71059 5201 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 25.077 1 0.07510233813471782 0.0038026748066326927 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 2799 2725 AEVEHVVNA True H1975_Epitope_Rep2 966.4770594676199 966.47596993586 14.567 2 0.07506803529425504 0.0038026748066326927 0.9438714419765777 ['ENST00000577286.5_1_17:79993838-79994415:-|nuORF', 'ENST00000579842.5_1_17:79993838-79994531:-|nuORF', 'ENSG00000169738|ENST00000306869|DCXR'] 101946 8768 SPLSSHPVV True PC9_epitope_Rep2 921.49198125577 921.49088993586 39.083 2 0.07506109474564795 0.0038026748066326927 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 123340 9320 VHVSGSPTAL True PC9_epitope_Rep1 966.51344497634 966.51234993586 40.705 2 0.0750497468842395 0.0038026748066326927 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 40275 9234 HRNGGLITL True PC9_epitope_Rep4 979.55631284783 979.55520993586 43.116 2 0.0750230612404889 0.0038026748066326927 0.9438714419765777 ['ENST00000511214.1_1_17:47013530-47014505:-|nuORF', 'nc|ENSG00000159210|Q96H20-2|SNF8', 'ENSG00000159210|ENST00000502492|SNF8'] 34552 20621 GQFGVGFYSA True PC9_epitope_Rep1 1031.4712458111896 1031.47014993586 84.137 2 0.07501637381681883 0.0038026748066326927 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 17529 7703 EHINSVSAM True PC9_epitope_Rep1 986.44913046762 986.44802993586 34.45 2 0.07501286638877906 0.0038026748066326927 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 116190 13789 TVTNAVVTV True PC9_epitope_Rep2 902.50729696674 902.50618993586 58.324 2 0.07501132489749474 0.0038026748066326927 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 3472 18935 [Acetylation]-AGLNSLEAVK True PC9_epitope_Rep1 1042.5658747883201 1042.56476993586 77.618 2 0.07499977866772144 0.0038026748066326927 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 75497 23540 NQIPGLIWI True PC9_epitope_Rep5 1052.60186605792 1052.6007699358602 95.531 2 0.07499954749016714 0.0038026748066326927 0.9438714419765777 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000493208.1_1_5:131825047-131826375:-|nuORF', 'ENSG00000125347|ENST00000245414|IRF1'] 110014 11041 THTTPVLL True PC9_epitope_Rep2 880.5018176634799 880.50072993586 47.788 2 0.07499390116190643 0.0038026748066326927 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 104987 8555 STIEYVIQR True NCI_RA007_Epitope_Rep3 1107.59242357303 1107.59187496793 40.723 1 0.07494774042570705 0.0038026748066326927 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'SEC23B|p.G124C|1|0.18|ENSG00000101310|chr20:18524436-18524436|G/T|missense_variant'] 6268 9385 APRPTIINA True PC9_epitope_Rep1 951.5501648382299 951.54906993586 40.958 2 0.0749455834438072 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 116485 11179 TYDKGYQF True PC9_epitope_Rep1 1020.45526139388 1020.45416993586 47.884 2 0.07493340204989302 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 52311 11376 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54290993586 49.078 2 0.07493199904213173 0.0038026748066326927 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 27766 21264 FQEEDFPAL True PC9_epitope_Rep5 1094.4920408254197 1094.49147496793 86.842 1 0.07491522810125921 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 130729 18389 VVDPLNGWMY True H1975_Epitope_Rep3 1192.5586809166 1192.55758993586 77.088 2 0.07491007096469444 0.0038026748066326927 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant'] 72518 22717 M[Oxidation]VDGTLLLL True PC9_epitope_Rep1 989.5467196310099 989.54617496793 92.185 1 0.07490762661676183 0.0038026748066326927 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 72048 15495 MRAFADAL True PC9_epitope_Rep1 893.4429228883698 893.44182993586 64.423 2 0.0749006235950882 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 4099 11305 AHSPLAAQL True PC9_epitope_Rep5 906.4923156089401 906.49120993586 48.477 2 0.07489469683672742 0.0038026748066326927 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 75780 4509 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 24.559 2 0.07488562578505419 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 34298 19692 GPPGILALLD True H1975_Epitope_Rep3 964.5593325396 964.55878496793 82.473 1 0.07486943392978415 0.0038026748066326927 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 115611 5852 TVINQTQKENL True NCI_RA007_Epitope_Rep5 1286.6830294825797 1286.6819299358601 29.194 2 0.07485475663311297 0.0038026748066326927 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 71953 12755 MPTTLEGA True PC9_epitope_Rep5 818.3844049527399 818.38385496793 54.069 1 0.07485098321891974 0.0038026748066326927 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 21098 7960 ERDPHEEIL True PC9_epitope_Rep3 1136.5462016566 1136.5445549037902 35.596 3 0.07485079343887086 0.0038026748066326927 0.9438714419765777 ['ENSG00000153140|ENST00000283122|CETN3'] 72505 13944 MVAPVTGNDV True PC9_epitope_Rep1 1001.48518162317 1001.48408993586 58.471 2 0.07484833081331262 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 101940 6120 SPLSAARAA True PC9_epitope_Rep1 842.46101548066 842.45990993586 28.355 2 0.0748472829786653 0.0038026748066326927 0.9438714419765777 ['ENST00000381222.8_2_X:2408799-2418966:-|nuORF', 'ENST00000381223.9_1_X:2408799-2418966:-|nuORF', 'ENST00000430536.7_1_X:2256005-2418966:-|nuORF', 'ENSG00000169084|ENST00000334651|DHRSX'] 43762 8027 IIYDDLSK True H1975_Epitope_Rep1 965.5069626135701 965.50586993586 35.82 2 0.07483253683554572 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000586523.1_1_18:43667267-43667453:-|nuORF'] 66981 19610 LTADPDQITNI True PC9_epitope_Rep1 1199.60338217955 1199.6022899358602 80.258 2 0.07482761425546065 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 48497 8425 KEFIKIVEA True NCI_RA007_Epitope_Rep4 1075.62774645259 1075.62664993586 39.221 2 0.07482581716406848 0.0038026748066326927 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 67618 4777 LTEVNKTGTQY True H1975_Epitope_Rep2 1252.62993128056 1252.62882993586 23.464 2 0.07480810038570986 0.0038026748066326927 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 14281 6360 DSYVGDEAQTK True NCI_RA007_Epitope_Rep1 1211.5306111621096 1211.52950993586 28.765 2 0.07480769437517518 0.0038026748066326927 0.9438714419765777 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 113093 17410 TPYNYPVPV True PC9_epitope_Rep6 1048.5229470308798 1048.52184993586 79.582 2 0.07480732287446462 0.0038026748066326927 0.9438714419765777 ['ENSG00000170906|ENST00000485876|NDUFA3'] 107422 4428 SYTSHTNEI True NCI_RA007_Epitope_Rep3 1050.4618033263002 1050.4607099358602 24.213 2 0.07480072626827851 0.0038026748066326927 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 47103 7316 IVVVTAGVR True H1975_Epitope_Rep3 912.5756513100798 912.57454993586 33.113 2 0.07479967267788624 0.0038026748066326927 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000470280.1_1_12:21796836-21807485:-|nuORF'] 47262 20816 IYEPNFIFF True NCI_RA007_Epitope_Rep4 1188.5855472874398 1188.5844499358602 90.188 2 0.07479480242356717 0.0038026748066326927 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 70392 18661 LYQFNPAFF True NCI_RA007_Epitope_Rep4 1145.5545815123298 1145.5534899358602 80.724 2 0.07479199182173298 0.0038026748066326927 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 13880 7681 DRDPASGTAL True PC9_epitope_Rep1 1001.47778774361 1001.47668993586 34.368 2 0.07478973844434975 0.0038026748066326927 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 31754 11406 GELGAIAQV True NCI_RA007_Epitope_Rep3 856.4654321547599 856.46432993586 51.99 2 0.07478244485236218 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000113657|Q14195|DPYSL3', 'DPYSL3|p.A516Qfs*15|1|0.67|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant', 'ENSG00000113657|ENST00000343218|DPYSL3'] 1478 13243 [Acetylation]-AEELVLER True H1975_Epitope_Rep3 999.5236756231699 999.52317496793 56.195 1 0.0747723536645274 0.0038026748066326927 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 114069 17199 TRPPLLAL True PC9_epitope_Rep2 879.5541875895099 879.55308993586 71.414 2 0.0747708417532982 0.0038026748066326927 0.9438714419765777 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1', 'ROR1-PGM1|1|fusion'] 9882 20881 AYNDNWFITF True NCI_RA007_Epitope_Rep5 1289.57168812845 1289.5705899358602 87.315 2 0.07476640869420953 0.0038026748066326927 0.9438714419765777 ['ENSG00000107929|ENST00000316157|LARP4B', 'LARP4B|p.S572Lfs*24|1|0.11|ENSG00000107929|chr10:815015-815052|GGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCT/-|frameshift_variant'] 113827 7918 TREDAGSYTL True PC9_epitope_Rep6 1111.51456717515 1111.51346993586 39.888 2 0.07476425322846537 0.0038026748066326927 0.9438714419765777 ['ENSG00000204941|ENST00000342951|PSG5', 'ENST00000401992.1_1_19:43687564-43690557:-|nuORF', 'ENST00000600817.5_1_19:43679971-43690557:-|nuORF', 'nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1', 'ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11', 'ENST00000599245.1_1_19:43528837-43530575:-|nuORF', 'ENSG00000242221|ENST00000406487|PSG2', 'ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 102484 8523 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 37.74 2 0.07475952331437287 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 42003 14969 IEDPLIVTP True H1975_Epitope_Rep2 995.55391280599 995.55280993586 62.73 2 0.07475660264022506 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.P626Lfs*11|1|0.21|ENSG00000120539|chr10:27170834-27170834|C/-|frameshift_variant'] 132533 18099 VYPGDPLRF True PC9_epitope_Rep4 1062.5498304850598 1062.5487299358601 77.684 2 0.07472414130133953 0.0038026748066326927 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 70499 23571 LYTDIINIF True PC9_epitope_Rep2 1110.5961119711399 1110.5950099358602 96.141 2 0.07472032738308614 0.0038026748066326927 0.9438714419765777 ['ENST00000533377.1_1_8:145066406-145067006:+|nuORF', 'ENSG00000178719|ENST00000395068|GRINA'] 35029 13473 GRAPQVLVL True PC9_epitope_Rep6 951.5865503469499 951.58544993586 63.518 2 0.07470441300556754 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 36640 20481 GVLPNIQAV True PC9_epitope_Rep1 909.5283667644899 909.52781496793 83.592 1 0.0746998702624884 0.0038026748066326927 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 1387 8528 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 37.758 2 0.07469790785596706 0.0038026748066326927 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 21610 17578 ERSPLDQVL True PC9_epitope_Rep5 1055.56112344475 1055.56002993586 72.622 2 0.07469690361062448 0.0038026748066326927 0.9438714419765777 ['ENSG00000168994|ENST00000380283|PXDC1'] 29469 22698 FVIDGFDEL True PC9_epitope_Rep2 1053.50187723313 1053.50137496793 92.803 1 0.07469234327353545 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 29718 18359 FVPIKVEQI True PC9_epitope_Rep1 1071.63283183303 1071.6317299358602 75.409 2 0.07468993597373826 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 120272 16906 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 70.187 2 0.07468418983220873 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 4907 13260 ALGPILRL True H1975_Epitope_Rep2 851.55927296995 851.55816993586 56.133 2 0.07468345958070687 0.0038026748066326927 0.9438714419765777 ['ENSG00000135953|ENST00000258436|MFSD9'] 108496 12104 TEFIHLISS True NCI_RA007_Epitope_Rep3 1045.54441075145 1045.5433099358602 54.728 2 0.07466364654860233 0.0038026748066326927 0.9438714419765777 ['ENSG00000117505|ENST00000370272|DR1'] 54119 9961 KYMPNVKVAVF True NCI_RA007_Epitope_Rep3 1294.7107648838999 1294.7096699358601 46.267 2 0.0746627343960376 0.0038026748066326927 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 32583 9125 GHAMPIRSL True PC9_epitope_Rep5 980.5225701914001 980.52146993586 40.046 2 0.07466015806133648 0.0038026748066326927 0.9438714419765777 ['ENSG00000140395|ENST00000267973|SKIC8'] 114882 10166 TTDVDSLSY True H1975_Epitope_Rep3 999.43967089939 999.4390749679301 44.147 1 0.07464512878268346 0.0038026748066326927 0.9438714419765777 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000490583.5_1_22:20040979-20049207:+|nuORF', 'ENST00000485715.2_1_22:20024321-20049197:+|nuORF', 'ENST00000484373.5_1_22:20024321-20041279:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-3|TANGO2', 'nc|ENSG00000183597|Q6ICL3-4|TANGO2', 'nc|ENSG00000183597|Q6ICL3-6|TANGO2'] 4147 8400 AHVQNGIAL True PC9_epitope_Rep4 921.5032146458099 921.50210993586 39.773 2 0.07464206695163345 0.0038026748066326927 0.9438714419765777 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 29605 22054 FVLDKVPFL True PC9_epitope_Rep5 1076.6270181766 1076.62592993586 89.858 2 0.07463582725364896 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 95478 20576 SAMEVVPAL True PC9_epitope_Rep1 915.4735543103099 915.47300496793 83.959 1 0.07463518124233158 0.0038026748066326927 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 17649 10706 EHQPSVLL True PC9_epitope_Rep4 921.4919812557699 921.49088993586 48.932 2 0.07462423952059134 0.0038026748066326927 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT'] 26289 16278 FIDDANYSV True PC9_epitope_Rep6 1042.4607406971402 1042.46017496793 74.974 1 0.07461007127769415 0.0038026748066326927 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 83876 12825 QEIATVVVP True H1975_Epitope_Rep2 954.5385970950199 954.5380449679301 54.44 1 0.07460055582322461 0.0038026748066326927 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 35714 7896 GTSELLLAK True NCI_RA007_Epitope_Rep5 930.5385970950199 930.53750993586 37.064 2 0.07459744149166217 0.0038026748066326927 0.9438714419765777 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1', 'ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 131865 19428 VYDPATETW True PC9_epitope_Rep5 1080.4763907612798 1080.47528993586 79.78 2 0.07459168422741218 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 72753 10281 NADHTTLLL True NCI_RA007_Epitope_Rep4 996.52400966004 996.52290993586 46.4 2 0.07457887653640052 0.0038026748066326927 0.9438714419765777 ['ENSG00000160695|ENST00000621676|VPS11', 'nc|ENSG00000160695|Q9H270|VPS11'] 58287 10589 LETGEVIPP True H1975_Epitope_Rep2 953.50696261357 953.50641496793 45.754 1 0.0745784958744241 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000165264|O95139-2|NDUFB6', 'ENSG00000165264|ENST00000379847|NDUFB6'] 107387 8624 SYSSTFHSL True NCI_RA007_Epitope_Rep4 1027.46107505031 1027.45996993586 39.955 2 0.07457827447634649 0.0038026748066326927 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 38842 13069 HIGDAVVI True PC9_epitope_Rep2 822.4599528515 822.45884993586 55.547 2 0.07457711926999154 0.0038026748066326927 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 48606 4285 KEIEQGDVTA True NCI_RA007_Epitope_Rep4 1088.5349682665599 1088.5338699358601 22.817 2 0.07457500538405716 0.0038026748066326927 0.9438714419765777 ['ENSG00000120451|ENST00000265909|SNX19', 'nc|ENSG00000120451|Q92543-2|SNX19'] 32741 16654 GHVVDIVAL True PC9_epitope_Rep4 921.52836676449 921.52726993586 72.024 2 0.07456428465730035 0.0038026748066326927 0.9438714419765777 ['ENSG00000125870|ENST00000246071|SNRPB2', 'ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 48528 11453 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 50.702 2 0.07454803068776195 0.0038026748066326927 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 102336 6557 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48104993586 30.194 2 0.07453231650073491 0.0038026748066326927 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 6349 4659 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 25.247 2 0.07452987284752417 0.0038026748066326927 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 65114 10368 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42816496793 44.891 1 0.07452178384069146 0.0038026748066326927 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 129238 8446 VTDMSDAEQY True H1975_Epitope_Rep2 1157.45466934053 1157.45407496793 37.439 1 0.07450368677907124 0.0038026748066326927 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 104567 5952 SSSKGSLGGGF True NCI_RA007_Epitope_Rep4 982.4719740871798 982.47086993586 29.514 2 0.07448571203192414 0.0038026748066326927 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 104148 5148 SSAGPGLLK True NCI_RA007_Epitope_Rep3 828.4705175352 828.46942993586 27.242 2 0.07448397228362327 0.0038026748066326927 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 113697 7318 TRDETNYGI True PC9_epitope_Rep6 1067.4883524273098 1067.48724993586 37.317 2 0.07448208060783285 0.0038026748066326927 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 67244 17283 LTDLVDDNYFY True H1975_Epitope_Rep1 1376.6136125100802 1376.6130749679298 71.94 1 0.07447712649519905 0.0038026748066326927 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 136715 16762 YIITGGGFL True H1975_Epitope_Rep3 939.5065686907499 939.5060249679301 70.016 1 0.07447395713522986 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 44136 19413 ILPGSLFRF True PC9_epitope_Rep6 1048.60695143836 1048.60584993586 87.328 2 0.07446982606386653 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000136536|Q9H992-2|MARCHF7', 'ENSG00000136536|ENST00000409175|MARCHF7'] 62136 22591 LLPDYYLVTV True PC9_epitope_Rep2 1194.65362684726 1194.65252993586 92.396 2 0.07445991510353278 0.0038026748066326927 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 83972 7059 QELPQPQA True NCI_RA007_Epitope_Rep4 909.4555957470499 909.45448993586 33.777 2 0.07445418808172444 0.0038026748066326927 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'ENST00000551520.1_1_12:57108340-57119068:-|nuORF'] 72340 18837 MTDLYPPELF True H1975_Epitope_Rep2 1224.5736622744 1224.5725699358602 78.213 2 0.07444988869471877 0.0038026748066326927 0.9438714419765777 ['ENSG00000148291|ENST00000371964|SURF2'] 86327 13168 QQIGNAKISL True PC9_epitope_Rep5 1070.6084079903399 1070.60730993586 55.655 2 0.07444453991632306 0.0038026748066326927 0.9438714419765777 ['ENSG00000100625|ENST00000216513|SIX4', 'SIX4|p.Q371Rfs*8|1|0.35|ENSG00000100625|chr14:60720196-60720197|CT/-|frameshift_variant'] 59380 12059 LGLGIDEDD True H1975_Epitope_Rep3 945.42910621569 945.42855496793 51.547 1 0.07440829620944606 0.0038026748066326927 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000530115.1_1_11:27910388-27910514:-|nuORF'] 126910 10219 VPVDTGVAA True PC9_epitope_Rep1 827.4388830537498 827.43833496793 44.188 1 0.07440806380781541 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 112924 21876 TPQSIFIFA True PC9_epitope_Rep4 1022.5436824754598 1022.5431749679301 92.357 1 0.07437969883566231 0.0038026748066326927 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 17294 13965 EHDGSLFQAV True PC9_epitope_Rep6 1101.50908787189 1101.50798993586 65.571 2 0.07437196929963275 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 31362 5225 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.39082993586 25.184 2 0.0743633854992887 0.0038026748066326927 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 87697 17410 QVDSSFLSLY True H1975_Epitope_Rep2 1157.5604547384098 1157.5593499358602 72.26 2 0.07436321197752196 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'nc|ENSG00000170632|Q8N2F6-4|ARMC10', 'nc|ENSG00000170632|Q8N2F6-3|ARMC10'] 108507 11645 TEFPGVVA True H1975_Epitope_Rep1 818.4174193331799 818.4168749679301 49.782 1 0.07435428596299161 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 113607 8018 TRATEGMVVA True PC9_epitope_Rep3 1033.5226297610498 1033.5215299358601 35.817 2 0.07435299453023694 0.0038026748066326927 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 31590 19071 GEFTFLLPA True H1975_Epitope_Rep3 993.5171333744498 993.51658496793 79.97 1 0.07432936424276154 0.0038026748066326927 0.9438714419765777 ['ENSG00000099203|ENST00000214869|TMED1'] 57996 6234 LEQVRSLSA True H1975_Epitope_Rep2 1001.55055876105 1001.54946993586 28.938 2 0.07432868607563438 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 102248 12462 SPTGGFVDA True PC9_epitope_Rep1 849.3868474808899 849.3862949679301 52.8 1 0.07432175340650768 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 45006 22282 IQLPDSVNQLL True PC9_epitope_Rep5 1238.68705223386 1238.6859499358602 90.714 2 0.0743190008711105 0.0038026748066326927 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000469445.1_1_2:27263203-27263702:+|nuORF'] 131283 5711 VVQNGFFAHK True NCI_RA007_Epitope_Rep3 1145.5981776598098 1145.59654490379 29.439 3 0.07430215302811186 0.0038026748066326927 0.9438714419765777 ['ENSG00000132965|ENST00000380490|ALOX5AP'] 26750 21051 FLDGNEMTL True PC9_epitope_Rep3 1038.46919720586 1038.46867496793 86.252 1 0.0743019129634213 0.0038026748066326927 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 29795 11693 FVTFDDHD True PC9_epitope_Rep4 994.40322582102 994.40212993586 52.74 2 0.07430022185428972 0.0038026748066326927 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 23661 20580 EYGPIHILW True PC9_epitope_Rep4 1126.5811306133398 1126.58002993586 87.314 2 0.07429418191448668 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7', 'ENSG00000162627|ENST00000306121|SNX7'] 32787 10190 GIDSSSPEV True PC9_epitope_Rep3 889.4028914678499 889.40234496793 44.149 1 0.07428455786055814 0.0038026748066326927 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 136031 19811 YFQNTQGLIF True PC9_epitope_Rep6 1229.6080736371698 1229.6069699358602 88.861 2 0.07427232838503782 0.0038026748066326927 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 53236 14551 KTELGSFFTEY True H1975_Epitope_Rep2 1320.6237832709598 1320.62268993586 61.126 2 0.07426675961017763 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000459857.5_1_22:45072965-45122509:+|nuORF', 'ENST00000492289.5_1_22:45073049-45126704:+|nuORF', 'ENST00000495250.2_1_22:45121127-45205177:+|nuORF'] 83823 11216 QEEVFNTAV True H1975_Epitope_Rep2 1035.4872897981497 1035.48618993586 48.183 2 0.07426026755965187 0.0038026748066326927 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A'] 104274 15455 SSDYSIFDNY True H1975_Epitope_Rep2 1209.4825983405299 1209.48150993586 64.605 2 0.07424455371324858 0.0038026748066326927 0.9438714419765777 ['ENST00000584350.1_1_17:66246608-66253107:+|nuORF', 'nc|ENSG00000196704|Q86W34-5|AMZ2', 'ENSG00000196704|ENST00000359904|AMZ2'] 96191 11965 SEEFPVPPA True H1975_Epitope_Rep2 971.4600124211498 971.4594649679301 51.102 1 0.0742442936856008 0.0038026748066326927 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 109523 7343 THAGAHLDL True PC9_epitope_Rep3 933.4668291370899 933.4657299358599 33.254 2 0.07423914586632277 0.0038026748066326927 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3470835-3470958:-|nuORF'] 86144 8976 QPRYPVNSV True PC9_epitope_Rep3 1058.55089311422 1058.5497899358602 39.473 2 0.07423173455114741 0.0038026748066326927 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 119939 9920 VEYEVPEA True H1975_Epitope_Rep3 934.4283779396998 934.4278249679301 43.189 1 0.07423090048408897 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 48481 11840 KEEVWSFEA True H1975_Epitope_Rep2 1123.51858992643 1123.51748993586 50.618 2 0.07423034165215257 0.0038026748066326927 0.9438714419765777 ['ENSG00000127837|ENST00000248450|AAMP', 'ENST00000475678.5_1_2:219131145-219134809:-|nuORF', 'ENST00000489767.5_1_2:219130391-219134818:-|nuORF'] 26696 14726 FLDDSTALY True H1975_Epitope_Rep2 1043.48114178855 1043.48057496793 61.805 1 0.07422879627474457 0.0038026748066326927 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2'] 104273 16426 SSDVLVFDY True H1975_Epitope_Rep2 1043.48114178855 1043.48057496793 68.404 1 0.0742108458793386 0.0038026748066326927 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16871803-16876886:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000398588.2_1_6:58446590-58447106:-|nuORF'] 100225 22142 SLLNQIILA True PC9_epitope_Rep1 983.6015317047498 983.60042993586 89.983 2 0.07420727920476741 0.0038026748066326927 0.9438714419765777 ['ABCC8|p.R1103Q|1|0.3|ENSG00000006071|chr11:17406643-17406643|C/T|missense_variant'] 26830 18970 FLEKLLPPV True PC9_epitope_Rep6 1054.6426682407398 1054.6415699358602 85.613 2 0.07420487971318086 0.0038026748066326927 0.9438714419765777 ['ENSG00000011009|ENST00000374514|LYPLA2', 'ENST00000472213.1_1_1:24120901-24121219:+|nuORF'] 52619 7842 KQDLPNAM True PC9_epitope_Rep1 915.44840219163 915.44730993586 34.99 2 0.0741962681131811 0.0038026748066326927 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 106066 19422 SVLVSVSEV True PC9_epitope_Rep1 917.50696261357 917.50586993586 79.519 2 0.07419508209580705 0.0038026748066326927 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 91860 8756 RPNPPPVSV True PC9_epitope_Rep3 961.53451477409 961.53340993586 38.634 2 0.07417654826847893 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 87380 6222 QTDLHEHPLY True H1975_Epitope_Rep3 1251.58840082175 1251.58675490379 28.945 3 0.07417390086542489 0.0038026748066326927 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF', 'nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 102478 7921 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 35.448 2 0.07416053155316654 0.0038278501965652804 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 106507 12395 SVVPDVRSV True PC9_epitope_Rep2 956.52909504048 956.52798993586 52.987 2 0.07415602727150235 0.0038278501965652804 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 126005 8910 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.49088993586 44.238 2 0.07415567099269864 0.0038278501965652804 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 118708 4442 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 22.208 2 0.07415162158278459 0.0038278501965652804 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 1705 5722 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 27.039 2 0.07414998516952169 0.0038278501965652804 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 43240 16162 IHDDLPTEL True PC9_epitope_Rep1 1051.5185899264302 1051.51748993586 66.981 2 0.07414898607662483 0.0038278501965652804 0.9438714419765777 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'ARHGEF40|p.A737Pfs*3|1|0.38|ENSG00000165801|chr14:21078445-21078445|G/-|frameshift_variant', 'ENST00000555232.5_1_14:21538555-21549271:+|nuORF'] 25998 14487 FHDDDNLSL True PC9_epitope_Rep5 1074.4618033263 1074.4607099358602 60.725 2 0.07414041703462008 0.0038278501965652804 0.9438714419765777 ['ENSG00000152404|ENST00000282251|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 53939 2611 KYISKPENL True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 14.702 2 0.07413504503758801 0.003853215754221728 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 25431 10921 FELFADKVPK True NCI_RA007_Epitope_Rep1 1192.6492101731599 1192.64755490379 46.473 3 0.07413254020197474 0.003853215754221728 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA'] 98642 9392 SIPGGPVRL True H1975_Epitope_Rep2 894.52870111766 894.52760993586 41.091 2 0.0740800000123743 0.003853215754221728 0.9438714419765777 ['CON__P12763'] 108564 6516 TEGYSPPAA True H1975_Epitope_Rep2 891.3974121645898 891.39686496793 29.977 1 0.07406627033421313 0.003853215754221728 0.9438714419765777 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 73987 11789 NHQGATPLVL True PC9_epitope_Rep2 1048.56654317836 1048.5654499358602 50.679 2 0.07406626134061457 0.003853215754221728 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 113226 19263 TQDTPIPAL True PC9_epitope_Rep5 954.5022115862998 954.50110993586 79.137 2 0.07406258724931813 0.003873366730362031 0.9438714419765777 ['MINDY4|p.W431*|2|0.17|ENSG00000106125|chr7:30839252-30839252|G/-|frameshift_variant', 'ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 131075 9014 VVLVLAGR True NCI_RA007_Epitope_Rep5 825.5436229058099 825.54252993586 41.33 2 0.07404953456578753 0.003873366730362031 0.9438714419765777 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 99939 18065 SLIGHLQTL True PC9_epitope_Rep2 980.5654805492001 980.56438993586 74.789 2 0.07404840710026397 0.003873366730362031 0.9438714419765777 ['ENSG00000138166|ENST00000369583|DUSP5'] 5991 16473 APLDSIHSLAA True PC9_epitope_Rep1 1093.57677350889 1093.57566993586 68.189 2 0.07404731924778707 0.003873366730362031 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 85970 18583 QPFGDHIISV True PC9_epitope_Rep5 1111.56620882519 1111.5651099358602 76.504 2 0.07403971999802478 0.003873366730362031 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 117645 10099 VAIGNPVHL True H1975_Epitope_Rep3 918.5287011176599 918.52760993586 43.886 2 0.0740386100629277 0.003873366730362031 0.9438714419765777 ['ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3'] 47794 10029 IYQRHVYNL True PC9_epitope_Rep5 1204.6352914445197 1204.6336349037902 43.556 3 0.07403087924854021 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 92470 8971 RQYSVTDAL True NCI_RA007_Epitope_Rep4 1051.52982331647 1051.5287299358602 41.343 2 0.07403040177755948 0.003873366730362031 0.9438714419765777 ['ENSG00000062725|ENST00000083182|APPBP2'] 47471 13697 IYKDSSTFL True PC9_epitope_Rep2 1072.5440763982801 1072.5429699358601 57.977 2 0.07400781052141367 0.003873366730362031 0.9438714419765777 ['ENSG00000145388|ENST00000388822|METTL14'] 34835 9232 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42828993586 40.363 2 0.07399664715702924 0.003873366730362031 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 19419 16184 ELPKHYFSF True PC9_epitope_Rep2 1166.5760452329 1166.57494993586 67.504 2 0.07399628657202276 0.003873366730362031 0.9438714419765777 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 43079 11995 IGIVGLPNVGK True H1975_Epitope_Rep1 1065.65462990677 1065.6535299358602 51.146 2 0.07399394013154079 0.003873366730362031 0.9438714419765777 ['ENSG00000138430|ENST00000284719|OLA1', 'nc|ENSG00000138430|Q9NTK5-3|OLA1'] 109763 13704 THISDTSVVL True PC9_epitope_Rep1 1070.56078909158 1070.5596899358602 57.563 2 0.07398412158625119 0.003873366730362031 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 66809 21463 LSVPGLVSV True PC9_epitope_Rep1 869.52221875489 869.52112993586 87.398 2 0.07398306395301261 0.003873366730362031 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 54276 8656 KYPNVFKKI True PC9_epitope_Rep2 1135.67536535135 1135.67371490379 38.661 3 0.0739749849619119 0.003873366730362031 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 118085 6845 VATVSLPR True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 33.014 2 0.07397473309293069 0.003873366730362031 0.9438714419765777 ['CON__P00761'] 71773 7645 [Acetylation]-M[Oxidation]NGPEDLPK True H1975_Epitope_Rep3 1057.4750115590298 1057.47390993586 34.388 2 0.07395356245653235 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'TXNRD1-LAMTOR3|1|fusion', 'TXNRD1|p.V276Mfs*88|1|0.48|ENSG00000198431|chr12:104319008-104319011|GTCT/-|frameshift_variant', 'TXNRD1-LAMTOR3|3|fusion', 'TXNRD1|p.C214Lfs*4|1|0.52|ENSG00000198431|chr12:104315801-104315802|-/G|frameshift_variant', 'TXNRD1-LAMTOR3|2|fusion'] 127457 11822 VQSNRILGV True PC9_epitope_Rep3 984.5716285587998 984.57052993586 50.49 2 0.0739525141148875 0.003873366730362031 0.9438714419765777 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000533130.1_1_8:145534985-145535559:+|nuORF', 'ENST00000527328.5_1_8:145534845-145537878:+|nuORF'] 27684 11064 FQDEVAKAQQL True PC9_epitope_Rep4 1275.64591569787 1275.6448099358602 50.334 2 0.07395224173042497 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 103759 9073 SRFLNKQPY True PC9_epitope_Rep1 1151.60874234351 1151.60710490379 39.751 3 0.07394247499218154 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'ENST00000484855.2_1_20:44526619-44527086:+|nuORF'] 130296 6669 VTTGGMVLK True NCI_RA007_Epitope_Rep1 904.5051887917599 904.50408993586 29.952 2 0.07394192065687913 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000173369|P02746|C1QB', 'ENSG00000173369|ENST00000509305|C1QB'] 43445 13270 IHSSIVSTL True PC9_epitope_Rep1 955.5338460677501 955.53274993586 55.908 2 0.07394028132671056 0.003873366730362031 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 113714 10281 TRDETNYGIP True PC9_epitope_Rep4 1164.5411162761598 1164.54000993586 47.232 2 0.07391167803734083 0.003873366730362031 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 105434 14496 SVALVIHNV True PC9_epitope_Rep5 950.5549158655001 950.55380993586 60.759 2 0.07391085334237578 0.003873366730362031 0.9438714419765777 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2'] 63235 18588 LPAAMPITA True PC9_epitope_Rep3 883.48372507119 883.48262993586 76.724 2 0.07390074778926864 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant'] 7594 20150 ASIDILHSI True PC9_epitope_Rep1 967.5338460677501 967.53274993586 82.336 2 0.07390001131671137 0.003873366730362031 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'PSMD11|p.R20L|1|0.1|ENSG00000108671|chr17:32444582-32444582|G/T|missense_variant'] 137857 7797 YPIEHGIVTN True H1975_Epitope_Rep1 1141.5767735088898 1141.57566993586 34.947 2 0.07389962887566351 0.003873366730362031 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 39768 12605 HQADIGEYV True PC9_epitope_Rep5 1030.47197408718 1030.47086993586 53.485 2 0.07388985857341814 0.003873366730362031 0.9438714419765777 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7', 'ENST00000562523.1_1_16:69375146-69375552:+|nuORF'] 34834 9131 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42828993586 39.974 2 0.07388511158741047 0.003873366730362031 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 5606 10417 APAAATVAV True PC9_epitope_Rep5 769.4334037504899 769.43230993586 45.054 2 0.07388232569629684 0.003873366730362031 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 132929 20046 VYTVVDEMF True PC9_epitope_Rep6 1101.5052483614097 1101.5041499358601 89.773 2 0.07388186818436737 0.003873366730362031 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 34648 18798 GQISEVVVV True PC9_epitope_Rep5 928.5229470308799 928.52239496793 77.319 1 0.07387784870199056 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 137091 17564 YLDAIPPTFY True H1975_Epitope_Rep2 1198.5910265907 1198.58992993586 72.868 2 0.07387592055410756 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000092969|P61812-2|TGFB2'] 118915 6180 VEEPSVGA True H1975_Epitope_Rep2 786.3759484440199 786.3753949679301 28.742 1 0.07383930303851842 0.003873366730362031 0.9438714419765777 ['ENSG00000278129|ENST00000621650|ZNF8'] 40091 6865 HRDERVLSL True PC9_epitope_Rep4 1123.60980497267 1123.60816490379 33.625 3 0.07383757985681907 0.003873366730362031 0.9438714419765777 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 9426 19691 AVVPGLLEV True PC9_epitope_Rep6 895.5378688190299 895.53676993586 88.398 2 0.07383182959147579 0.003873366730362031 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 9896 9709 AYNPVTHQL True PC9_epitope_Rep2 1041.52434401321 1041.5232499358601 42.684 2 0.07382966312501416 0.003873366730362031 0.9438714419765777 ['ENST00000525625.1_1_11:125884983-125893371:-|nuORF', 'ENSG00000064309|ENST00000531738|CDON', 'nc|ENSG00000064309|Q4KMG0|CDON', 'CDON|p.Q260Rfs*40|1|0.19|ENSG00000064309|chr11:126017239-126017239|C/-|frameshift_variant'] 17415 5313 EHFPNHQQL True PC9_epitope_Rep4 1148.53630567924 1148.5352099358602 27.149 2 0.07381749206178663 0.003873366730362031 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 76337 12087 NSELSCQLY True H1975_Epitope_Rep1 1055.4593607981499 1055.45877496793 51.506 1 0.07381737744007887 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 117806 22665 VAMLPGLAL True PC9_epitope_Rep5 883.5201105799099 883.51900993586 92.182 2 0.07381564080895275 0.003873366730362031 0.9438714419765777 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 116641 16612 TYIKFVNLF True NCI_RA007_Epitope_Rep4 1143.63283183303 1143.6317299358602 72.017 2 0.07381474053091427 0.003873366730362031 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 138572 7190 YRPGTVALR True PC9_epitope_Rep3 1031.5876129761098 1031.58650993586 32.668 2 0.07381181931083206 0.003873366730362031 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'H3C13|p.H40Q|1|0.1|ENSG00000183598|chr1:149813562-149813562|G/C|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 47347 9631 IYHNPTANSF True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 42.388 2 0.07381176794750478 0.003873366730362031 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 31921 13007 GEQWTPIEP True H1975_Epitope_Rep2 1055.4923751785898 1055.49187496793 55.148 1 0.07380980664238397 0.003873366730362031 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 57505 4455 LEKPAKYDDIK True NCI_RA007_Epitope_Rep1 1318.7132669817 1318.7116349037901 21.437 3 0.07380881175071477 0.003873366730362031 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000434621.2_1_7:9655276-9655384:+|nuORF', 'ENST00000432206.1_1_20:13373901-13374318:+|nuORF', 'ENST00000505218.1_1_5:159377718-159377781:-|nuORF', 'ENST00000424043.3_1_1:92580458-92580773:-|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 86116 9967 QPQPQPYAV True PC9_epitope_Rep6 1026.5134449763398 1026.5123499358601 48.88 2 0.07380752232253361 0.003873366730362031 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 129356 5434 VTEEEGSANM[Oxidation]Y True H1975_Epitope_Rep2 1244.4866981252399 1244.48560993586 25.928 2 0.07380567879930434 0.003873366730362031 0.9438714419765777 ['ENSG00000129317|ENST00000344862|PUS7L', 'nc|ENSG00000129317|Q9H0K6-2|PUS7L'] 8267 4535 ATIQGAYAR True NCI_RA007_Epitope_Rep4 949.4981292653698 949.49702993586 23.841 2 0.07379299996782836 0.003873366730362031 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 51968 7676 KKWTSVIRL True NCI_RA007_Epitope_Rep5 1129.69716342509 1129.69552490379 36.228 3 0.07378984103055376 0.003873366730362031 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 64071 15543 LQDTSLQQL True PC9_epitope_Rep4 1044.54513902744 1044.5440499358601 67.71 2 0.07378167192541506 0.003873366730362031 0.9438714419765777 ['ENSG00000067334|ENST00000436063|DNTTIP2', 'DNTTIP2|p.N616Tfs*33|1|0.3|ENSG00000067334|chr1:93873174-93873174|T/-|frameshift_variant'] 1164 8232 AEATGAYVP True H1975_Epitope_Rep2 877.41814760917 877.4175949679301 36.615 1 0.07376382500165693 0.003873366730362031 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'nc|ENSG00000126456|Q14653-2|IRF3'] 19967 14874 EMDSPILGDY True H1975_Epitope_Rep3 1138.4852411928198 1138.48467496793 62.599 1 0.07376140864505289 0.003873366730362031 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 39541 16335 HPFGFVAV True PC9_epitope_Rep6 872.4544735482399 872.45336993586 75.204 2 0.07376029609358589 0.003873366730362031 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 63982 18920 LQAPELANV True PC9_epitope_Rep1 953.5181960036099 953.51708993586 77.56 2 0.0737567359134663 0.003873366730362031 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 29420 23249 FVFPGELLL True PC9_epitope_Rep4 1033.5848190114498 1033.5837299358602 97.677 2 0.07374838314711397 0.003873366730362031 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 96163 7293 SEEERVQIVSA True H1975_Epitope_Rep2 1245.62009487285 1245.61898993586 32.991 2 0.0737421925044325 0.003873366730362031 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1'] 25418 5499 FEKPDSVAA True H1975_Epitope_Rep3 962.4709114580198 962.46980993586 26.204 2 0.07373204184150099 0.003873366730362031 0.9438714419765777 ['ENST00000482023.5_1_1:249144411-249145095:-|nuORF', 'ENST00000533927.5_1_1:249144411-249149911:-|nuORF', 'nc|ENSG00000171163|Q9BU19-3|ZNF692', 'nc|ENSG00000171163|Q9BU19-2|ZNF692', 'ENSG00000171163|ENST00000306601|ZNF692', 'nc|ENSG00000171163|Q9BU19-5|ZNF692'] 54065 17989 KYLVIGDLLF True NCI_RA007_Epitope_Rep3 1179.69034670915 1179.68924993586 78.827 2 0.07372380929273256 0.003884144459306513 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 1249 9138 AEDLPVTEA True H1975_Epitope_Rep3 943.44984166027 943.4492949679301 40.138 1 0.07372019120102977 0.003884144459306513 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 87066 10758 QSEIASM[Oxidation]LY True H1975_Epitope_Rep1 1056.47976227 1056.47917496793 46.342 1 0.07369647404365871 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 6246 6968 APRLQSEVA True PC9_epitope_Rep1 969.5243440132099 969.52324993586 31.607 2 0.07367947139662731 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 53485 20615 KVLDFEHFL True PC9_epitope_Rep5 1146.60734536118 1146.60568490379 84.345 3 0.07367920006180641 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF'] 11907 13952 DHSATIVSI True PC9_epitope_Rep2 941.48181049489 941.48070993586 58.944 2 0.0736659388281116 0.003884144459306513 0.9438714419765777 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75'] 70221 21702 LYLPSFFTY True PC9_epitope_Rep6 1149.57464825057 1149.5740749679298 96.363 1 0.07365782490676898 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 96654 10671 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.4652749679301 46.072 1 0.07365077620154449 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 35012 9031 GRAPGGLSL True PC9_epitope_Rep6 826.4661008611 826.4650099358599 44.781 2 0.07364826167718445 0.003884144459306513 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 32093 8559 GEYGDSPVP True H1975_Epitope_Rep3 919.3923267841499 919.39177496793 37.91 1 0.07364457692694293 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 102349 5901 SPVFTSRSAA True PC9_epitope_Rep2 1021.51925863277 1021.51816993586 28.093 2 0.07363404697612176 0.003884144459306513 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 40206 4566 HRGTGIAL True PC9_epitope_Rep4 823.46643521427 823.46532993586 24.06 2 0.07362850348434546 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 120441 11393 VFTSRSAAF True PC9_epitope_Rep1 984.5028802926398 984.50178993586 48.703 2 0.07362592506458811 0.003884144459306513 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 96023 9665 SEALPSDIA True H1975_Epitope_Rep1 901.43927697657 901.43872496793 42.102 1 0.07361980995201862 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 41109 17014 HYMPPPYASL True PC9_epitope_Rep5 1174.5481162328997 1174.5470099358602 70.463 2 0.07360515764530946 0.003884144459306513 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 116915 13653 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47107496793 60.408 1 0.07360072156841886 0.003884144459306513 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 9777 17908 AYLEAYKEF True PC9_epitope_Rep5 1132.54407639828 1132.5429699358601 73.9 2 0.07359530111651338 0.003884144459306513 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 126997 12963 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 54.871 2 0.07358601405820372 0.003884144459306513 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 43410 17607 IHSEPLGVVL True PC9_epitope_Rep2 1062.60734536118 1062.6062499358602 73.003 2 0.0735793957307812 0.003884144459306513 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 42654 8596 IEVDSSPSV True H1975_Epitope_Rep2 931.44984166027 931.4492949679301 38.018 1 0.0735776496413231 0.003884144459306513 0.9438714419765777 ['ENSG00000181467|ENST00000323534|RAP2B', 'ENSG00000125249|ENST00000245304|RAP2A', 'ENSG00000123728|ENST00000370874|RAP2C'] 102706 8291 SQDPYHETL True PC9_epitope_Rep4 1088.4774533904401 1088.47634993586 39.351 2 0.07357450187267223 0.003884144459306513 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 72678 23051 MYIDPDLLAEL True PC9_epitope_Rep4 1291.6369908069498 1291.6358899358602 96.887 2 0.073571846899453 0.003884144459306513 0.9438714419765777 ['ENSG00000104611|ENST00000265807|SH2D4A'] 39832 13034 HQGATPLVL True PC9_epitope_Rep3 934.5236157372199 934.52250993586 55.161 2 0.07357103566495607 0.003884144459306513 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 136659 8111 YIDQEELNK True PC9_epitope_Rep3 1150.5506183307 1150.5495299358602 36.174 2 0.07355515342407025 0.003884144459306513 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 33342 7278 GLDVEDVK True NCI_RA007_Epitope_Rep1 873.4443623570099 873.44326993586 32.301 2 0.07354342870516303 0.003884144459306513 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 24561 20812 FALPGLLHA True PC9_epitope_Rep3 937.5385375253701 937.53798496793 85.325 1 0.07352109995455738 0.003884144459306513 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 57569 13117 LELDTNLPA True H1975_Epitope_Rep2 984.51277627 984.51222496793 55.575 1 0.07351254685544518 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 8883 14255 AVFVRGVGV True PC9_epitope_Rep5 902.5337864980997 902.53268993586 59.836 2 0.07350934478135936 0.003884144459306513 0.9438714419765777 ['ENST00000232458.9_1_3:172468581-172468611:+|nuORF'] 73831 11284 NHDVQVIL True PC9_epitope_Rep6 936.50288029264 936.50178993586 54.419 2 0.07350837997636009 0.003884144459306513 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 102352 6915 SPVFTSRSAA True PC9_epitope_Rep3 1021.51925863277 1021.51816993586 31.611 2 0.07350336417956169 0.003884144459306513 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 109540 10671 THANALTVM True PC9_epitope_Rep5 956.4749512926401 956.47384993586 46.035 2 0.0734987806699235 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1'] 48158 6775 KASAVYQAL True NCI_RA007_Epitope_Rep3 949.5232813840499 949.52218993586 33.749 2 0.07349398917614534 0.003884144459306513 0.9438714419765777 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000477938.5_1_1:219352746-219385067:+|nuORF', 'ENST00000474379.5_1_1:219347271-219385067:+|nuORF', 'nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1'] 108565 6543 TEGYSPPAA True H1975_Epitope_Rep3 891.3974121645898 891.39686496793 30.135 1 0.07348256378211723 0.003884144459306513 0.9438714419765777 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 21230 11506 ERFSTSQVL True PC9_epitope_Rep4 1065.54547338061 1065.54436993586 52.019 2 0.07348178161173863 0.003884144459306513 0.9438714419765777 ['ENSG00000181481|ENST00000328381|RNF135'] 96653 10577 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.4652749679301 45.707 1 0.07347899859579694 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 65150 14725 LSDSFSDLY True H1975_Epitope_Rep2 1045.46040634397 1045.4593099358601 61.801 2 0.07346507718331403 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 138329 14934 YRAPEVLL True PC9_epitope_Rep4 959.5440168286299 959.54290993586 65.385 2 0.07346097805075795 0.003884144459306513 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 14801 22101 DYATIFNNL True PC9_epitope_Rep4 1069.5080252427301 1069.5069299358602 93.228 2 0.07346048063389504 0.003884144459306513 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 98402 21681 SIIGRLLEV True PC9_epitope_Rep1 998.6124307416198 998.6118849679301 88.224 1 0.0734417877227617 0.003884144459306513 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 104271 8276 SSDTSALSY True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 36.784 1 0.07344165598243312 0.003884144459306513 0.9438714419765777 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 44035 21766 ILLAEVPTM True PC9_epitope_Rep1 985.55180463101 985.55070993586 88.556 2 0.07342325827387154 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF'] 123308 10259 VHSPPNVGL True PC9_epitope_Rep5 918.49231560894 918.49120993586 44.448 2 0.07341248405205605 0.003884144459306513 0.9438714419765777 ['ENSG00000146247|ENST00000275034|PHIP', 'PHIP|p.G744Efs*5|1|0.13|ENSG00000146247|chr6:78990956-78990956|C/-|frameshift_variant'] 42666 11034 IEVGICNEA True H1975_Epitope_Rep2 946.44298245802 946.44243496793 47.473 1 0.07341205258777327 0.003884144459306513 0.9438714419765777 ['ENSG00000106588|ENST00000223321|PSMA2'] 33532 20028 GLIDGVVEA True PC9_epitope_Rep3 871.46509780159 871.46454496793 82.287 1 0.07340715994091428 0.003884144459306513 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL'] 39458 10995 HNIKLFVL True NCI_RA007_Epitope_Rep3 982.59638675466 982.59528993586 50.337 2 0.07340181084852689 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000137491|O94956-3|SLCO2B1', 'ENSG00000137491|ENST00000289575|SLCO2B1'] 6092 12709 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 54.19 2 0.07339885944920789 0.003884144459306513 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 37496 12146 GYFGNPQKF True PC9_epitope_Rep6 1056.50288029264 1056.5017899358602 58.071 2 0.07339369045819788 0.003884144459306513 0.9438714419765777 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 8347 15729 ATLSKIIQV True PC9_epitope_Rep2 971.6015317047498 971.60042993586 65.772 2 0.0733876669811712 0.003884144459306513 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 89393 14306 REMIPFAVV True NCI_RA007_Epitope_Rep5 1060.57393705792 1060.57282993586 61.721 2 0.07338401627569717 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'ENST00000586456.1_1_17:75486911-75493449:+|nuORF'] 74811 20297 NLPDEEIFQQL True PC9_epitope_Rep6 1344.6561460284 1344.65504993586 90.777 2 0.0733673191636774 0.003884144459306513 0.9438714419765777 ['ENSG00000169019|ENST00000381571|COMMD8'] 88611 15335 RALTVPEL True PC9_epitope_Rep2 897.5283667644899 897.52726993586 64.266 2 0.0733629516642366 0.003884144459306513 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 105541 7515 SVDPTQTEY True H1975_Epitope_Rep1 1038.45056993626 1038.4499749679298 33.906 1 0.07336258631352646 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 13750 15521 DQLIYNLLK True NCI_RA007_Epitope_Rep2 1118.63356010902 1118.6324699358602 65.079 2 0.07336204777371547 0.003884144459306513 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF', 'ENST00000469976.2_1_11:18418389-18418551:+|nuORF'] 4050 18500 AHPPLLVL True PC9_epitope_Rep2 858.53272386894 858.53162993586 76.497 2 0.07335843442985429 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000130810|Q9NQ55-2|PPAN', 'ENSG00000130810|ENST00000253107|PPAN', 'nc|ENSG00000130810|Q9NQ55-3|PPAN'] 112572 11035 TPAPHSPWTA True PC9_epitope_Rep1 1063.50869394907 1063.50758993586 47.334 2 0.07334482645679537 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 118885 5620 VEEPENPAA True H1975_Epitope_Rep2 954.4294405688598 954.42834993586 26.616 2 0.0733342877854328 0.003884144459306513 0.9438714419765777 ['ENSG00000171316|ENST00000423902|CHD7'] 130297 5876 VTTGGMVLK True NCI_RA007_Epitope_Rep3 904.5051887917599 904.50408993586 30.09 2 0.07332116825322729 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000173369|P02746|C1QB', 'ENSG00000173369|ENST00000509305|C1QB'] 102497 6445 SPYIPPHAA True PC9_epitope_Rep6 951.48141657207 951.48030993586 33.419 2 0.07331153396011734 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 130883 9857 VVHAVEVAL True NCI_RA007_Epitope_Rep1 935.5440168286299 935.54290993586 42.344 2 0.07328081087088995 0.003884144459306513 0.9438714419765777 ['CON__P12763'] 96391 15744 SEHWLVLVP True H1975_Epitope_Rep2 1078.5811306133398 1078.58002993586 65.73 2 0.07327997844895956 0.003884144459306513 0.9438714419765777 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 135714 13079 YEIPSNLTP True H1975_Epitope_Rep3 1032.51277627 1032.51227496793 55.552 1 0.07327792590597965 0.003884144459306513 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 28989 16590 FTHSQFIVV True PC9_epitope_Rep4 1076.5654805492 1076.5643899358602 71.789 2 0.07327134674977714 0.003884144459306513 0.9438714419765777 ['ENSG00000136824|ENST00000374793|SMC2'] 106439 17435 SVVAAVQGL True PC9_epitope_Rep4 842.48616759934 842.48506993586 75.058 2 0.07324161975103842 0.003884144459306513 0.9438714419765777 ['ENSG00000110092|ENST00000227507|CCND1'] 61584 17779 LLGPPPVGV True PC9_epitope_Rep6 847.51673945163 847.51564993586 81.022 2 0.07323456337881737 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 129288 4810 VTDRSDARLQY True H1975_Epitope_Rep2 1322.6578773638998 1322.6562449037901 23.59 3 0.07322815675351398 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 135524 4933 YEEDGARSI True H1975_Epitope_Rep3 1038.4618033262998 1038.4607099358602 24.101 2 0.07321657713586517 0.003884144459306513 0.9438714419765777 ['ENSG00000138107|ENST00000369905|ACTR1A', 'ENST00000470322.5_1_10:104240622-104242055:-|nuORF'] 6874 11736 AQIGSYVHV True PC9_epitope_Rep6 972.50288029264 972.50178993586 56.296 2 0.0732102340860081 0.003884144459306513 0.9438714419765777 ['ENSG00000166847|ENST00000300087|DCTN5', 'ENST00000566053.5_1_16:23652819-23678462:+|nuORF', 'nc|ENSG00000166847|Q9BTE1-2|DCTN5'] 47590 21317 IYNGETLVF True PC9_epitope_Rep1 1054.5335117145798 1054.5324099358602 86.824 2 0.07320179769538449 0.003884144459306513 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 90711 5112 RKNQGDFSL True NCI_RA007_Epitope_Rep3 1063.5410567065098 1063.53994993586 27.1 2 0.07320152900645702 0.003884144459306513 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF'] 2465 6229 AEQPPHLTP True H1975_Epitope_Rep2 988.4977949122 988.49668993586 28.921 2 0.07318285379283826 0.003884144459306513 0.9438714419765777 ['ENSG00000146733|ENST00000275605|PSPH'] 12859 17257 DLLEVADVLEK True NCI_RA007_Epitope_Rep1 1242.67073346338 1242.66962993586 71.256 2 0.07318184496257855 0.003884144459306513 0.9438714419765777 ['ENST00000509696.5_1_4:7062591-7066009:-|nuORF', 'ENSG00000109519|ENST00000264954|GRPEL1'] 136461 5325 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 25.871 2 0.07317972483169842 0.003884144459306513 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 5811 17220 APFLASAVSA True PC9_epitope_Rep6 932.4967322830399 932.49562993586 78.827 2 0.07317955981272176 0.003884144459306513 0.9438714419765777 ['ENSG00000146242|ENST00000369750|TPBG', 'TPBG|p.L117Sfs*56|1|0.45|ENSG00000146242|chr6:82365309-82365327|GCTGGCGGAGCTGGCCGCG/-|frameshift_variant'] 35558 15821 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.51670993586 66.011 2 0.0731787787048917 0.003884144459306513 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 118346 8306 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep1 964.4688036634799 964.46770993586 36.309 2 0.07317871740518132 0.003884144459306513 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 59015 18338 LGAPALEGV True PC9_epitope_Rep1 825.45961849833 825.4590749679301 75.325 1 0.07317499871871325 0.003884144459306513 0.9438714419765777 ['ENSG00000172478|ENST00000388934|MAB21L4', 'nc|ENSG00000172478|Q08AI8-3|MAB21L4', 'nc|ENSG00000172478|Q08AI8-2|MAB21L4'] 77321 15065 NYKKFYEQF True PC9_epitope_Rep3 1265.6080736371698 1265.60641490379 63.08 3 0.07317230017547494 0.003884144459306513 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 131698 18842 VWSDVTPLTF True NCI_RA007_Epitope_Rep1 1163.58627556343 1163.5851699358602 77.435 2 0.07316607491250852 0.003884144459306513 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 127028 5237 VPYGVGKAA True PC9_epitope_Rep6 860.4756029156398 860.4745099358599 27.928 2 0.0731656311219015 0.003884144459306513 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 6875 17937 AQIHDLVLV True PC9_epitope_Rep2 1006.58113061334 1006.58002993586 74.3 2 0.07316431383740786 0.003884144459306513 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 137162 19297 YLDPSVLSGV True PC9_epitope_Rep6 1048.54407639828 1048.5429699358601 86.873 2 0.07315712599935982 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'nc|ENSG00000170540|Q15041-3|ARL6IP1'] 119944 9885 VEYEVPEAA True H1975_Epitope_Rep3 1005.4654917244097 1005.46438993586 43.054 2 0.07315418170856498 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 9670 19771 AYGNVFSAF True PC9_epitope_Rep6 974.4497820906199 974.44868993586 88.707 2 0.07314962736598483 0.003884144459306513 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 139826 5060 YVDGVEVHN True NCI_RA007_Epitope_Rep3 1030.47197408718 1030.47086993586 26.897 2 0.07314957894285122 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 1712 11308 AEGPVAVVV True H1975_Epitope_Rep1 839.4752685624699 839.47472496793 48.474 1 0.07314814189885369 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 102617 20131 SQATDFGEALV True PC9_epitope_Rep2 1136.5349682665599 1136.5338699358601 82.844 2 0.0731404619258614 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 115347 20422 TVEEQVINI True PC9_epitope_Rep3 1043.54989005471 1043.5487899358602 83.806 2 0.0731323156219914 0.003884144459306513 0.9438714419765777 ['ENST00000476275.5_1_1:78046613-78098535:-|nuORF', 'nc|ENSG00000036549|Q8IYH5-4|ZZZ3'] 1951 12057 AEIPEGYVP True H1975_Epitope_Rep3 973.47566248529 973.47511496793 51.539 1 0.07312811020920672 0.003884144459306513 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 24599 6793 FANGRSTGL True PC9_epitope_Rep1 921.46682913709 921.4657299358599 30.935 2 0.0731230724700173 0.003884144459306513 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 94941 12042 RYPDSHQLF True PC9_epitope_Rep5 1161.55670677065 1161.5550749037902 51.313 3 0.07312238843462293 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 17313 12837 EHDPQYAVI True PC9_epitope_Rep3 1070.50327421546 1070.5021699358601 54.396 2 0.07312204935500129 0.003884144459306513 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 9408 7423 AVVIVDDR True PC9_epitope_Rep2 885.4919812557699 885.49088993586 33.929 2 0.07312001390193 0.003884144459306513 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 6487 5613 APTGDLPRA True PC9_epitope_Rep6 896.4715801643599 896.47048993586 29.663 2 0.0731169890987988 0.003884144459306513 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 43296 6541 IHDSQAPSL True PC9_epitope_Rep4 966.47705946762 966.47596993586 32.287 2 0.07310894538037675 0.003884144459306513 0.9438714419765777 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF'] 97802 13020 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.49088993586 55.364 2 0.0731087806900925 0.003884144459306513 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 104086 11849 SRVDGVVL True PC9_epitope_Rep5 843.48141657207 843.48030993586 50.576 2 0.07310562416940763 0.003884144459306513 0.9438714419765777 ['ENST00000496699.1_1_1:117509714-117517097:+|nuORF', 'ENSG00000134247|ENST00000393203|PTGFRN'] 52840 13453 KQVSDLISVL True NCI_RA007_Epitope_Rep3 1100.6441247927198 1100.64302993586 60.199 2 0.07309982729719468 0.003884144459306513 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 40221 6364 HRGTGLVL True PC9_epitope_Rep4 851.49773534255 851.49662993586 31.56 2 0.07309676747138374 0.003884144459306513 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 93524 5245 RSNPYYIVK True NCI_RA007_Epitope_Rep3 1138.61349337078 1138.6118549037901 27.635 3 0.07308959435968017 0.003884144459306513 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.D681Mfs*9|1|0.2|ENSG00000108055|chr10:110596475-110596475|G/-|frameshift_variant'] 1922 6434 AEINGTMNA True H1975_Epitope_Rep2 919.4069313024701 919.4063849679301 29.668 1 0.07308465443227481 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 113220 21236 TQDTNTFFL True PC9_epitope_Rep2 1085.50293986229 1085.50184993586 87.143 2 0.07308315330134454 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000160688|Q8NFF5-4|FLAD1', 'nc|ENSG00000160688|Q8NFF5-5|FLAD1', 'nc|ENSG00000160688|Q8NFF5-3|FLAD1', 'nc|ENSG00000160688|Q8NFF5-2|FLAD1', 'ENSG00000160688|ENST00000292180|FLAD1'] 132627 10981 VYPTKTFPNL True NCI_RA007_Epitope_Rep4 1178.6335601090198 1178.6324699358602 49.107 2 0.07307852335892337 0.003884144459306513 0.9438714419765777 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 16824 19941 EFNSTPAVF True PC9_epitope_Rep5 1010.4709114580198 1010.4703749679301 81.758 1 0.07306787615521919 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 1029 7326 AEAGALPAAA True H1975_Epitope_Rep2 840.4341320264799 840.4335849679301 33.12 1 0.0730655470223525 0.003884144459306513 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 113940 17399 TRIWQDVQL True PC9_epitope_Rep6 1157.6193070272097 1157.61820993586 79.54 2 0.07304605531865689 0.003884144459306513 0.9438714419765777 ['ENSG00000004766|ENST00000305866|VPS50', 'VPS50|p.S583Vfs*7|1|0.23|ENSG00000004766|chr7:93308938-93308938|A/-|frameshift_variant', 'VPS50|p.K778Nfs*7|1|0.13|ENSG00000004766|chr7:93349900-93349900|G/-|frameshift_variant', 'nc|ENSG00000004766|Q96JG6-3|VPS50', 'ENST00000471188.5_1_7:92887656-92969983:+|nuORF', 'ENST00000441602.5_1_7:92883193-92979232:+|nuORF'] 84896 16310 QHSITPLAL True PC9_epitope_Rep3 978.5498304850599 978.54872993586 67.872 2 0.07304247875251635 0.003884144459306513 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 1525 13392 AEEQPPFGVYA True H1975_Epitope_Rep2 1206.5557037111398 1206.55460993586 56.646 2 0.07303943655845364 0.003884144459306513 0.9438714419765777 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2', 'ENST00000483432.1_1_9:140070142-140074912:-|nuORF'] 32207 21378 GFGFVLFK True PC9_epitope_Rep1 913.5061747679299 913.50506993586 87.062 2 0.07303098985712163 0.003884144459306513 0.9438714419765777 ['ENSG00000152795|ENST00000295470|HNRNPDL', 'nc|ENSG00000152795|O14979-2|HNRNPDL', 'nc|ENSG00000152795|O14979-3|HNRNPDL', 'HNRNPDL|p.A199T|1|0.1|ENSG00000152795|chr4:82428295-82428295|C/T|missense_variant', 'nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD'] 120585 11676 VGAGAPVYL True H1975_Epitope_Rep1 845.46470387877 845.46360993586 49.901 2 0.0730108270001174 0.003884144459306513 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 34297 19755 GPPGILALLD True H1975_Epitope_Rep1 964.5593325396 964.55878496793 82.22 1 0.07300531842769985 0.003884144459306513 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 57464 10477 LEIVNPQAA True H1975_Epitope_Rep2 953.51819600361 953.5176449679301 45.318 1 0.07300303789419947 0.003884144459306513 0.9438714419765777 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 22917 15025 EVFSSFAHA True PC9_epitope_Rep5 993.4555957470499 993.45448993586 62.797 2 0.07296798780646292 0.003884144459306513 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 121006 6049 VGFAEAAR True PC9_epitope_Rep2 819.4239016959499 819.42280993586 28.66 2 0.07296482750118521 0.003884144459306513 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 133311 2756 WEQQEPGERKL True H1975_Epitope_Rep2 1398.6891774921799 1398.68752490379 14.629 3 0.07296014888049643 0.003884144459306513 0.9438714419765777 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 100183 20011 SLLGGDVVSV True PC9_epitope_Rep4 944.51786165044 944.51676993586 85.106 2 0.07295148182300178 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000157514|Q99576|TSC22D3'] 66813 21361 LSVPGLVSV True PC9_epitope_Rep3 869.52221875489 869.52112993586 87.463 2 0.07294762178963486 0.003884144459306513 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 27779 20189 FQEEVVAVL True PC9_epitope_Rep4 1032.5491617787197 1032.5480699358602 85.794 2 0.07294527609108561 0.003884144459306513 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4', 'nc|ENSG00000163918|P35249-2|RFC4', 'ENST00000494047.5_1_3:186509405-186522502:-|nuORF'] 59805 18434 LHASDFSVL True PC9_epitope_Rep5 987.50254593947 987.50144993586 75.927 2 0.07291857909742251 0.003884144459306513 0.9438714419765777 ['ENSG00000130827|ENST00000369682|PLXNA3'] 96145 11210 SEEDPVTSIP True H1975_Epitope_Rep2 1072.49243474824 1072.4913299358602 48.16 2 0.07291848243977771 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 1344 12177 AEEDPPWAP True H1975_Epitope_Rep1 1010.4345259492999 1010.43397496793 51.857 1 0.07291650847825437 0.003884144459306513 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 39196 6814 HLGALLAR True PC9_epitope_Rep6 849.51847078713 849.51736993586 35.064 2 0.07290951555823308 0.003884144459306513 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 20968 11845 ERADALQL True PC9_epitope_Rep5 914.48214484806 914.48104993586 50.561 2 0.07290846767924114 0.003884144459306513 0.9438714419765777 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 128485 22214 VSFGDFVQV True PC9_epitope_Rep1 996.4916469025999 996.49054993586 90.268 2 0.07288887255625012 0.003884144459306513 0.9438714419765777 ['ENSG00000166263|ENST00000376352|STXBP4', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 39602 10138 HPLLGVSA True PC9_epitope_Rep2 792.4493881678001 792.4488349679301 44.334 1 0.07286431943819956 0.003884144459306513 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 103441 19121 SRADTILCL True PC9_epitope_Rep5 990.5168161046199 990.51570993586 78.582 2 0.07286172898150031 0.003884144459306513 0.9438714419765777 ['ENSG00000187531|ENST00000328666|SIRT7', 'ENST00000572976.5_1_17:79870294-79872532:-|nuORF', 'nc|ENSG00000187531|Q9NRC8-3|SIRT7', 'SIRT7|p.G268V|1|0.48|ENSG00000187531|chr17:81914307-81914307|C/A|missense_variant', 'ENST00000574992.5_1_17:79871648-79872373:-|nuORF', 'ENST00000576156.1_1_17:79871830-79872373:-|nuORF'] 70205 20228 LYLPSFFTY True NCI_RA007_Epitope_Rep3 1149.57464825057 1149.5740749679298 88.135 1 0.07286013577755482 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 37725 11414 HASDRIIAL True PC9_epitope_Rep5 994.5559784946599 994.55488993586 48.903 2 0.07285108942851687 0.003884144459306513 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 47326 13953 IYGYVAEQF True NCI_RA007_Epitope_Rep4 1088.5178616504397 1088.51727496793 60.947 1 0.07284926711849539 0.003884144459306513 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 27062 21994 FLPDPSALQNL True PC9_epitope_Rep3 1213.6342883850098 1213.6331899358602 89.899 2 0.07284766058851745 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 2243 12285 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 52.338 2 0.07284229946934105 0.003884144459306513 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 6856 3629 AQIENSAAVQK True NCI_RA007_Epitope_Rep5 1157.6040508858898 1157.6029499358601 19.933 2 0.07283071965078461 0.003884144459306513 0.9438714419765777 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 88860 5356 REAEFTKSIA True NCI_RA007_Epitope_Rep1 1150.59823722946 1150.5971499358602 24.911 2 0.07282982224891636 0.003884144459306513 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 33897 19696 GLYEGLTWL True H1975_Epitope_Rep1 1050.53859709502 1050.53807496793 81.985 1 0.07282953649129166 0.003884144459306513 0.9438714419765777 ['ENSG00000165527|ENST00000298316|ARF6'] 87523 12084 QTHSVFVNV True PC9_epitope_Rep2 1029.5243440132099 1029.5232499358601 51.791 2 0.07282641598712765 0.003884144459306513 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 6272 9330 APRPTIINA True PC9_epitope_Rep3 951.5501648382299 951.54906993586 40.827 2 0.0728160348354914 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 27989 11977 FQTHTTPVL True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 51.066 2 0.07279885950833316 0.003884144459306513 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 7895 9249 ATASNLVKV True PC9_epitope_Rep1 901.5232813840499 901.52218993586 40.428 2 0.07278973862234459 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 90889 18427 RLAVLFSGA True PC9_epitope_Rep5 932.5443511817999 932.54324993586 75.9 2 0.07278794851143543 0.003884144459306513 0.9438714419765777 ['ENSG00000129226|ENST00000250092|CD68', 'ENST00000581621.1_1_17:7482995-7483061:+|nuORF', 'nc|ENSG00000129226|P34810-2|CD68', 'nc|ENSG00000129226|P34810-3|CD68'] 17209 15885 EHAGVISVL True PC9_epitope_Rep3 923.5076313199099 923.50708496793 66.251 1 0.07278671877553777 0.003884144459306513 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 99365 11102 SLDVGGPLRY True H1975_Epitope_Rep2 1075.56620882519 1075.5651099358602 47.738 2 0.07278581232952087 0.003884144459306513 0.9438714419765777 ['ENSG00000176894|ENST00000317479|PXMP2'] 77507 17272 NYQGHFHLF True PC9_epitope_Rep1 1161.5355774032498 1161.53392490379 71.255 3 0.07277923117872487 0.003884144459306513 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 102572 17501 SQANIAQVL True PC9_epitope_Rep3 942.5134449763399 942.51234993586 72.496 2 0.07277195259247395 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 102820 21038 SQFPGAITL True PC9_epitope_Rep3 932.4967322830399 932.49618496793 86.201 1 0.07276206568877461 0.003884144459306513 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 71771 7473 [Acetylation]-M[Oxidation]NGPEDLPK True H1975_Epitope_Rep1 1057.4750115590298 1057.47390993586 33.743 2 0.07275821630923811 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'TXNRD1-LAMTOR3|1|fusion', 'TXNRD1|p.V276Mfs*88|1|0.48|ENSG00000198431|chr12:104319008-104319011|GTCT/-|frameshift_variant', 'TXNRD1-LAMTOR3|3|fusion', 'TXNRD1|p.C214Lfs*4|1|0.52|ENSG00000198431|chr12:104315801-104315802|-/G|frameshift_variant', 'TXNRD1-LAMTOR3|2|fusion'] 131818 22073 VYAPPVGGFSF True PC9_epitope_Rep1 1139.56514619603 1139.56457496793 89.713 1 0.07275189073459704 0.003884144459306513 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 97317 6303 SFSTVHEKF True NCI_RA007_Epitope_Rep4 1080.5240096600398 1080.52290993586 30.848 2 0.07275148568222423 0.003884144459306513 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 35545 15611 GTIGLIHAV True PC9_epitope_Rep1 879.51780208079 879.51670993586 64.867 2 0.07272462851628908 0.003884144459306513 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 8514 14714 ATVPGLLKV True PC9_epitope_Rep6 896.5695033004799 896.56840993586 68.545 2 0.07270870642097818 0.003884144459306513 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 2060 10150 AELGEAPVP True H1975_Epitope_Rep2 881.4494477374499 881.4488949679301 44.041 1 0.07270573914152756 0.003884144459306513 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 48498 8521 KEFIKIVEA True NCI_RA007_Epitope_Rep4 1075.62774645259 1075.62664993586 39.566 2 0.07270515240895005 0.003884144459306513 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 22791 8664 EVDLNLKGPK True NCI_RA007_Epitope_Rep2 1111.62372370131 1111.62262993586 38.347 2 0.07270065241157599 0.0039054470709146967 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 76266 11268 NSDNNTIFV True H1975_Epitope_Rep2 1022.46688870674 1022.46637496793 48.387 1 0.07268664450510193 0.0039054470709146967 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 95993 11794 SEAFATVVTA True H1975_Epitope_Rep2 994.4971262058599 994.4965749679301 50.439 1 0.07268242041320284 0.0039054470709146967 0.9438714419765777 ['ZNF292-ORC3|2|fusion', 'ZNF292-ORC3|1|fusion', 'nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 127017 6644 VPYGVGKAA True PC9_epitope_Rep1 860.4756029156398 860.4745099358599 30.36 2 0.07267231351420257 0.0039054470709146967 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 27752 21509 FQDSVFNDL True PC9_epitope_Rep3 1083.48728979815 1083.48618993586 88.028 2 0.07266629986383152 0.0039054470709146967 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 1719 11568 AEGPVAVVV True NCI_RA007_Epitope_Rep4 839.4752685624699 839.47472496793 51.444 1 0.0726422433676196 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 6063 14828 APMPPIIHA True PC9_epitope_Rep1 945.51060852537 945.50950993586 61.855 2 0.072639392798544 0.0039054470709146967 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 118884 5581 VEEPENPAA True H1975_Epitope_Rep2 954.4294405688598 954.42834993586 26.471 2 0.07263826367643936 0.0039054470709146967 0.9438714419765777 ['ENSG00000171316|ENST00000423902|CHD7'] 32192 6746 GFEAAVAAGAK True H1975_Epitope_Rep1 990.5134449763398 990.51234993586 30.989 2 0.07263787299539148 0.0039054470709146967 0.9438714419765777 ['ENST00000479458.1_1_1:24140678-24143239:-|nuORF', 'ENST00000513148.1_1_1:24137168-24151905:-|nuORF', 'ENSG00000117305|ENST00000374490|HMGCL'] 2710 8711 AETLAPVQA True H1975_Epitope_Rep2 898.47599683846 898.47544496793 38.467 1 0.07261604509530964 0.0039054470709146967 0.9438714419765777 ['ENSG00000018408|ENST00000360632|WWTR1', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 79268 9226 PGHLQEGF True PC9_epitope_Rep1 883.41881631551 883.41770993586 40.341 2 0.07261520136545999 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 106358 4681 SVSLPSVKK True NCI_RA007_Epitope_Rep3 943.57023157647 943.56912993586 25.359 2 0.0726131374328226 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A', 'nc|ENSG00000034677|Q9NV58-2|RNF19A'] 96246 9168 SEEPGAPLP True H1975_Epitope_Rep2 895.4287122928699 895.42760993586 40.218 2 0.07259868183608952 0.0039054470709146967 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 84623 4760 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 25.754 2 0.07259536530293324 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 35016 15961 GRAPQVLVL True PC9_epitope_Rep1 951.5865503469499 951.58544993586 66.204 2 0.07259519225152583 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 103674 5803 SRDPTQAIA True PC9_epitope_Rep5 957.4879585044898 957.48686993586 27.314 2 0.07259331241180593 0.0039054470709146967 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2', 'nc|ENSG00000103479|Q08999-2|RBL2'] 112835 4630 TPMGPGRTV True PC9_epitope_Rep6 914.46438660894 914.46328993586 25.12 2 0.07258493458585043 0.0039054470709146967 0.9438714419765777 ['ENST00000489586.6_1_1:236706790-236711458:+|nuORF', 'ENSG00000116977|ENST00000366584|LGALS8', 'nc|ENSG00000116977|O00214-2|LGALS8'] 138013 22042 YQDELTALL True PC9_epitope_Rep2 1064.5389910178399 1064.53847496793 90.256 1 0.07258280719258615 0.0039054470709146967 0.9438714419765777 ['ENSG00000129474|ENST00000262713|AJUBA', 'AJUBA|p.G32Rfs*10|1|0.57|ENSG00000129474|chr14:22982162-22982173|CTTGCCCGGCCC/G|frameshift_variant'] 6085 12975 APMPPIIHA True PC9_epitope_Rep6 945.51060852537 945.50950993586 61.477 2 0.07256483641864964 0.0039054470709146967 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 96010 9783 SEAFSVASAA True H1975_Epitope_Rep2 938.4345259492999 938.43342993586 42.617 2 0.07256364982556728 0.0039054470709146967 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 24589 21497 FAMEIDPSL True PC9_epitope_Rep2 1021.4790336135699 1021.47792993586 88.158 2 0.07256149360564194 0.0039054470709146967 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 99189 23031 SLASLLVSV True PC9_epitope_Rep1 887.5327834385901 887.5322349679301 93.388 1 0.07256125481772432 0.0039054470709146967 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 140322 10386 YYEEQHPEL True PC9_epitope_Rep2 1206.5193182024198 1206.51822993586 45.272 2 0.07254793508989646 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 71069 5638 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 26.686 2 0.0725433505091725 0.0039054470709146967 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 41604 23851 IDFPGGILSF True PC9_epitope_Rep5 1064.55424715916 1064.5531499358601 96.725 2 0.07254131208051161 0.0039054470709146967 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 40489 15209 HSEQVFAL True PC9_epitope_Rep5 929.4606811274899 929.45958993586 63.51 2 0.07253978648286198 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3', 'nc|ENSG00000131408|P55055-2|NR1H2', 'ENSG00000131408|ENST00000253727|NR1H2'] 94582 10808 RYISQPPLL True NCI_RA007_Epitope_Rep5 1085.6233297784897 1085.62222993586 48.207 2 0.0725271132319389 0.0039054470709146967 0.9438714419765777 ['ENSG00000116406|ENST00000318130|EDEM3', 'nc|ENSG00000116406|Q9BZQ6-2|EDEM3'] 72446 17720 MTPEIIQKL True PC9_epitope_Rep5 1071.59981745259 1071.59872993586 73.176 2 0.07252249669327562 0.0039054470709146967 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 102416 16116 SPVVPQISA True PC9_epitope_Rep5 896.4967322830399 896.49618496793 66.981 1 0.07252208361527944 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 44803 2695 IPVEQKEGA True PC9_epitope_Rep1 969.5131106231698 969.51200993586 14.789 2 0.07249788169908351 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 94435 12870 RYFKGPELL True PC9_epitope_Rep6 1121.6233297784897 1121.62222993586 61.024 2 0.07249380908079285 0.0039054470709146967 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'CSNK2A1|p.D205H|1|0.1|ENSG00000101266|chr20:492262-492262|C/G|missense_variant', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 104614 13819 SSVATVVYL True H1975_Epitope_Rep3 937.5120479940099 937.51149496793 58.46 1 0.07247491616006299 0.0039054470709146967 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 134066 20340 WQLLLPTAL True NCI_RA007_Epitope_Rep4 1053.62226714933 1053.62116993586 88.06 2 0.07247026374131413 0.0039054470709146967 0.9438714419765777 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENSG00000162747|ENST00000650385|FCGR3B'] 89047 9755 REEFPTLQA True H1975_Epitope_Rep1 1089.5454733806098 1089.54436993586 42.452 2 0.07246981610123619 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 34824 18619 GQVEDVVGNL True PC9_epitope_Rep4 1028.5138388991597 1028.51274993586 79.695 2 0.0724617561550508 0.0039054470709146967 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 1210 6644 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.4074249679301 30.464 1 0.07245910123805208 0.0039054470709146967 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 21134 19570 ERDRLILFL True PC9_epitope_Rep4 1173.6869926642098 1173.6853349037901 83.399 3 0.07245793882458543 0.0039054470709146967 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 88822 6078 RDTQALLSA True NCI_RA007_Epitope_Rep5 973.51925863277 973.51816993586 30.061 2 0.0724434201794811 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF'] 48468 6021 KEEPIPCTA True H1975_Epitope_Rep3 986.4742825862999 986.47318993586 28.172 2 0.0724155642337676 0.0039054470709146967 0.9438714419765777 ['ENSG00000124588|ENST00000380455|NQO2'] 120292 14466 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 67.531 2 0.07241501036809608 0.0039054470709146967 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 12284 8852 DISLSDYK True H1975_Epitope_Rep1 939.45492704071 939.4543749679301 38.971 1 0.07241326813040416 0.0039054470709146967 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 108842 9515 TEQYPQGLGP True H1975_Epitope_Rep1 1088.5138388991597 1088.51274993586 41.522 2 0.07240898711586938 0.0039054470709146967 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'ENST00000591718.1_1_19:55966993-55972941:-|nuORF'] 107768 21609 TAMDVVYAL True PC9_epitope_Rep3 981.4841189940099 981.48357496793 88.416 1 0.07240156711619194 0.0039054470709146967 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 21004 5076 ERAPGETAL True PC9_epitope_Rep6 942.4770594676199 942.47596993586 27.182 2 0.07239001878794601 0.0039054470709146967 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 45004 18202 IQLNGRYYL True PC9_epitope_Rep1 1138.61349337078 1138.6123899358602 74.804 2 0.07237738498333394 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6'] 135265 11765 YAYEPADTAL True NCI_RA007_Epitope_Rep5 1112.5026055091198 1112.5015099358602 51.912 2 0.07237251707609937 0.003944874225113992 0.9438714419765777 ['ENSG00000106541|ENST00000419304|AGR2'] 30039 12000 FYISPVNKL True NCI_RA007_Epitope_Rep4 1079.60153170475 1079.6004299358601 53.162 2 0.07235587021224917 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 29311 14452 FVDPNGKISL True PC9_epitope_Rep6 1088.5866099165999 1088.58550993586 67.479 2 0.07235565156121465 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 105800 9970 SVILPILKK True NCI_RA007_Epitope_Rep4 1009.68995278633 1009.68884993586 45.194 2 0.07235179624761555 0.003944874225113992 0.9438714419765777 ['ENSG00000187231|ENST00000428443|SESTD1', 'ENST00000486468.1_1_2:180027226-180056568:-|nuORF'] 84184 6411 QESPGGLEA True H1975_Epitope_Rep3 886.4032258210199 886.40267496793 29.637 1 0.0723445960731201 0.003944874225113992 0.9438714419765777 ['ARAP2-PDS5A|1|fusion', 'chr4:39825488-39837932|160|15.06|0.92|4.04|-|2|PDS5A,None|1', 'ENSG00000121892|ENST00000303538|PDS5A'] 73365 7219 NEQGSYVVA True H1975_Epitope_Rep2 965.4454249861698 965.4448749679301 32.702 1 0.07234299016045523 0.003944874225113992 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 31374 12837 GEAPVPVLP True H1975_Epitope_Rep1 877.4909186266099 877.49037496793 54.444 1 0.07234178656821663 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 32451 12313 GGHGPSFPL True PC9_epitope_Rep4 867.42390169595 867.42280993586 55.174 2 0.07233660367269383 0.003944874225113992 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 2585 10361 AESEITIAP True H1975_Epitope_Rep2 929.4705771048499 929.47002496793 44.862 1 0.07232453028568037 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 96597 7608 SELVSNGV True H1975_Epitope_Rep2 803.40249754503 803.40140993586 34.217 2 0.07230826483085327 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF', 'ENST00000517342.1_1_8:57389817-57390279:-|nuORF', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 6104 11456 APM[Oxidation]PPIIHA True PC9_epitope_Rep5 961.50552352537 961.50442993586 49.064 2 0.07229949994568663 0.003944874225113992 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 25513 8232 FEQEMATAA True NCI_RA007_Epitope_Rep1 996.4222470134398 996.42114993586 36.019 2 0.0722890581176906 0.003944874225113992 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 29316 11401 FVDPSQDHAL True PC9_epitope_Rep4 1127.52473793603 1127.52364993586 51.624 2 0.07228593322569182 0.003944874225113992 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 108586 14058 TEIDSVPPLP True H1975_Epitope_Rep2 1066.55464108198 1066.5540749679299 59.226 1 0.0722837370439456 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 46648 16182 ITVEKIIKI True PC9_epitope_Rep5 1055.69543208959 1055.6943299358602 67.233 2 0.07228222820681418 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 113385 17689 TQLGPPYHIL True PC9_epitope_Rep4 1137.61824439805 1137.6171499358602 76.066 2 0.07228218590000642 0.003944874225113992 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 116605 16316 TYGGSWKF True PC9_epitope_Rep5 944.43921740692 944.43812993586 67.756 2 0.0722821341242827 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000146416|Q9NVV5-6|AIG1', 'nc|ENSG00000146416|Q9NVV5-5|AIG1', 'nc|ENSG00000146416|Q9NVV5-3|AIG1', 'nc|ENSG00000146416|Q9NVV5-4|AIG1', 'ENSG00000146416|ENST00000357847|AIG1', 'nc|ENSG00000146416|Q9NVV5-1|AIG1'] 2393 11635 AEQIVPLSA True H1975_Epitope_Rep3 926.5072969667399 926.5067449679301 49.888 1 0.07227773220772864 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 32997 18207 GIVGGLSTV True PC9_epitope_Rep5 801.4596184983301 801.4590749679301 75.045 1 0.07226227715572149 0.003944874225113992 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 106453 18783 SVVDGTPLV True PC9_epitope_Rep5 885.48074786573 885.4801949679301 77.261 1 0.07225286695577218 0.003944874225113992 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 123693 6559 VIPELNGK True NCI_RA007_Epitope_Rep5 868.50181766348 868.50072993586 31.891 2 0.07224866806776678 0.003944874225113992 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 104805 17115 STDPYLDDFYY True H1975_Epitope_Rep2 1397.5663279644898 1397.56522993586 71.108 2 0.07224765847050417 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 17199 15100 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 63.339 2 0.07222971078703078 0.003944874225113992 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 95308 12451 SAFAPFGK True PC9_epitope_Rep2 823.42283906679 823.42174993586 53.199 2 0.07222826723238743 0.003944874225113992 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000470635.1_1_10:121340019-121341495:-|nuORF'] 114124 12639 TRSAIILHL True PC9_epitope_Rep4 1022.62366413166 1022.62256993586 56.457 2 0.07218970064304452 0.003944874225113992 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1', 'ENST00000518921.1_1_8:63055996-63056374:-|nuORF'] 63514 12083 LPKEPQGIIA True PC9_epitope_Rep4 1064.62299542532 1064.62188993586 54.281 2 0.07218468954252624 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10', 'ENST00000474216.5_1_1:11137420-11140866:-|nuORF'] 29062 20153 FTPDVKVWEV True PC9_epitope_Rep2 1218.62847472858 1218.62736993586 82.931 2 0.0721829125785094 0.003944874225113992 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF'] 120591 11932 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.46360993586 50.974 2 0.0721825993019335 0.003944874225113992 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 38887 18547 HIIENIVAV True PC9_epitope_Rep5 1006.58113061334 1006.58057496793 76.364 1 0.07218230037396595 0.003944874225113992 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 5667 22163 APALLLIPA True PC9_epitope_Rep5 877.56368964405 877.56258993586 90.287 2 0.07217916298145291 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 2663 7131 AETAAVTVAA True H1975_Epitope_Rep1 902.4709114580199 902.4703649679301 32.454 1 0.0721780511746198 0.003944874225113992 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 7552 18577 ASFNDTFVHV True PC9_epitope_Rep3 1135.5298233164701 1135.5287299358602 76.683 2 0.07217721510077342 0.003944874225113992 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 75130 11803 NMYGKVVTV True PC9_epitope_Rep2 1009.52665251233 1009.52554993586 50.731 2 0.07217667863970323 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 105954 20720 SVLGAITSV True PC9_epitope_Rep5 845.48583324617 845.48472993586 84.757 2 0.07217312694359254 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 2669 7206 AETAAVTVAA True H1975_Epitope_Rep3 902.4709114580199 902.4703649679301 32.694 1 0.07215127512201519 0.003944874225113992 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 28312 13900 FRYPTTEEL True PC9_epitope_Rep6 1154.5607890915799 1154.5596899358602 65.306 2 0.07214215660383094 0.003944874225113992 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 43086 16271 IGLFGGAGVGK True PC9_epitope_Rep1 974.5549158654998 974.55380993586 67.405 2 0.07211746645568674 0.003944874225113992 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 137501 21260 YLPPGFLSA True PC9_epitope_Rep5 963.50656869075 963.50546993586 86.827 2 0.07208318138051274 0.003944874225113992 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 73475 10590 NEVTDYAIA True H1975_Epitope_Rep1 994.46074069714 994.4601949679301 45.688 1 0.07208254406065652 0.003944874225113992 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 125960 9810 VPAGGAVAV True PC9_epitope_Rep2 739.42283906679 739.42229496793 43.071 1 0.07208118373631701 0.003944874225113992 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 6648 10666 AQAEVYKEL True PC9_epitope_Rep1 1049.53932537101 1049.53822993586 45.917 2 0.07205861645406395 0.003944874225113992 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 31534 13240 GEFGGFGSV True NCI_RA007_Epitope_Rep4 855.3762827971899 855.37573496793 58.059 1 0.07205291816121841 0.003944874225113992 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 9891 19529 AYNPMARDLF True PC9_epitope_Rep1 1196.5648289262 1196.56372993586 79.94 2 0.07204807920848419 0.003944874225113992 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 88378 13162 QYNPKFQTL True PC9_epitope_Rep3 1137.58185888933 1137.5807699358602 55.659 2 0.07203807781070493 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 44322 9250 IMDDPAGNSY True H1975_Epitope_Rep2 1081.43862535357 1081.43752993586 40.536 2 0.07203594485548308 0.003944874225113992 0.9438714419765777 ['ENSG00000109917|ENST00000227322|ZPR1'] 106506 13040 SVVPDVRSV True PC9_epitope_Rep1 956.52909504048 956.52798993586 55.028 2 0.07203538561503262 0.003944874225113992 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 6926 7137 AQLGEDIR True PC9_epitope_Rep3 900.46649478392 900.46538993586 32.461 2 0.0720217765276479 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG', 'TFG|p.P25R|1|0.33|ENSG00000114354|chr3:100713759-100713759|C/G|missense_variant'] 18043 13576 EIIRQLNGV True PC9_epitope_Rep1 1040.59784330664 1040.59674993586 57.076 2 0.07200330249828348 0.003944874225113992 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 103947 16731 SRPPLVVF True PC9_epitope_Rep4 913.53853752537 913.53744993586 72.323 2 0.07199893300696548 0.003944874225113992 0.9438714419765777 ['TMEM248|p.R131Pfs*40|1|0.15|ENSG00000106609|chr7:66945204-66945205|-/C|frameshift_variant', 'nc|ENSG00000106609|Q9NWD8-2|TMEM248', 'ENSG00000106609|ENST00000341567|TMEM248'] 35731 4020 GTSSVIVSR True NCI_RA007_Epitope_Rep3 904.4977949122 904.49668993586 22.263 2 0.07198429100277652 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 31526 12090 GEFGDLNAV True NCI_RA007_Epitope_Rep3 920.4239612655999 920.4234149679301 54.675 1 0.07197736937225067 0.003944874225113992 0.9438714419765777 ['ENSG00000080298|ENST00000617270|RFX3'] 76218 8482 NRYDGIYKV True PC9_epitope_Rep4 1126.5771078620598 1126.5760099358602 40.098 2 0.07197452078791498 0.003944874225113992 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 45357 8578 ISDGKMQLY True H1975_Epitope_Rep2 1053.51648175145 1053.5153899358602 37.949 2 0.0719728447706135 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000198182|Q96SK3-3|ZNF607', 'ENSG00000198182|ENST00000355202|ZNF607'] 70761 7421 MEDDAVPAA True H1975_Epitope_Rep2 917.3800478482899 917.3794949679301 33.489 1 0.07197210025654471 0.003944874225113992 0.9438714419765777 ['ENSG00000174628|ENST00000695302|IQCK', 'ENST00000568300.6_1_16:19775348-19867867:+|nuORF'] 37634 13587 HACGVIATI True PC9_epitope_Rep5 883.4585729525099 883.45746993586 57.285 2 0.07197094286311 0.003944874225113992 0.9438714419765777 ['ENSG00000183726|ENST00000374358|TMEM50A', 'ENST00000480937.5_1_1:25666968-25687193:+|nuORF'] 24656 12705 FASTILHL True H1975_Epitope_Rep1 900.5069030439199 900.50580993586 53.926 2 0.07196443853412982 0.003944874225113992 0.9438714419765777 ['ENSG00000129562|ENST00000250498|DAD1'] 54661 8334 LADVNNIGKY True H1975_Epitope_Rep1 1105.57677350889 1105.57566993586 36.988 2 0.07196085800817845 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 79272 8572 PGHLQEGFG True PC9_epitope_Rep1 940.4402800360799 940.43918993586 37.809 2 0.07195409485131103 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 22614 9572 ETQALILAPTR True H1975_Epitope_Rep3 1211.6873865870298 1211.68628993586 41.827 2 0.07194882989946565 0.003944874225113992 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3'] 36647 20412 GVLPNIQAV True PC9_epitope_Rep5 909.5283667644899 909.52781496793 83.552 1 0.07192887359283842 0.003944874225113992 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 1594 12402 AEFLPDPSA True H1975_Epitope_Rep2 945.4443623570099 945.44326993586 52.79 2 0.07192455336394245 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 99076 15098 SLADAINTEF True NCI_RA007_Epitope_Rep3 1079.51350454599 1079.5124099358602 66.874 2 0.07190767046221108 0.003944874225113992 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 105993 12335 SVLKSIQEV True PC9_epitope_Rep4 1001.57571087973 1001.5746099358599 55.256 2 0.07190133032281248 0.003944874225113992 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 63885 20629 LPVLIPVAS True PC9_epitope_Rep4 907.5742543277499 907.57314993586 87.505 2 0.07189047345059811 0.003944874225113992 0.9438714419765777 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 116815 15519 TYLTSIPSL True NCI_RA007_Epitope_Rep3 993.53826274185 993.53716993586 68.602 2 0.07188307974398345 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L'] 2065 10030 AELGEAPVP True NCI_RA007_Epitope_Rep4 881.4494477374499 881.4488949679301 45.424 1 0.07186823588861446 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 7329 4732 ARSTDQTVL True PC9_epitope_Rep4 989.51417325233 989.51306993586 24.755 2 0.07185704156509594 0.003944874225113992 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9', 'nc|ENSG00000010017|Q96S59-2|RANBP9'] 33288 14229 GLATDVQTV True PC9_epitope_Rep1 902.47091145802 902.4703649679301 59.557 1 0.07185504560553606 0.003944874225113992 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 108644 19428 TEKVCQFIL True PC9_epitope_Rep5 1079.5685173243098 1079.56740993586 79.78 2 0.0718541310402685 0.003944874225113992 0.9438714419765777 ['ENST00000483613.1_1_8:12428002-12428092:-|nuORF'] 46858 13200 IVGDQISF True H1975_Epitope_Rep3 877.45453311789 877.4539849679301 56.027 1 0.07185357605531652 0.003944874225113992 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000498765.5_1_11:67352240-67354045:+|nuORF'] 105559 8797 SVDSHFQEV True PC9_epitope_Rep4 1046.4668887067398 1046.4657899358601 41.356 2 0.07185035525016172 0.003944874225113992 0.9438714419765777 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 132964 22314 VYVDDIYVI True PC9_epitope_Rep1 1097.56447748969 1097.5639749679299 90.643 1 0.07184955325675915 0.003944874225113992 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 57945 11958 LEQNIQLPAA True H1975_Epitope_Rep2 1095.59242357303 1095.5913299358601 51.075 2 0.07184368539686868 0.003944874225113992 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 1100 6264 AEAPPGVET True H1975_Epitope_Rep2 869.41306222873 869.4125149679301 29.041 1 0.07184318207400892 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 125719 8771 VNELTEFAK True H1975_Epitope_Rep3 1049.53932537101 1049.5387749679298 38.744 1 0.07183339540302557 0.003944874225113992 0.9438714419765777 ['CON__P02769'] 95401 10670 SAIQSISHV True PC9_epitope_Rep3 940.4977949122 940.49668993586 45.988 2 0.071825548284217 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 116907 14333 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47107496793 60.396 1 0.07181899927062814 0.003944874225113992 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 1125 7997 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 35.71 2 0.07181284635186909 0.003944874225113992 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 56904 9434 LEDPTEVTP True H1975_Epitope_Rep3 999.47605640811 999.47494993586 41.289 2 0.0717998032740977 0.003944874225113992 0.9438714419765777 ['ENSG00000090889|ENST00000374403|KIF4A', 'ENSG00000226650|ENST00000435029|KIF4B'] 8350 15027 ATLSKIIQV True PC9_epitope_Rep4 971.6015317047498 971.60042993586 65.737 2 0.07178580877274902 0.003944874225113992 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 75267 13774 NPNQYNYIA True PC9_epitope_Rep3 1095.49852318819 1095.49742993586 58.062 2 0.07178266588397716 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 77799 19400 PAEPAFLA True PC9_epitope_Rep1 814.4225047136199 814.42140993586 79.434 2 0.07178251678663553 0.003944874225113992 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 83968 20152 QELLYVVPFVA True H1975_Epitope_Rep3 1276.70672504928 1276.70562993586 84.304 2 0.0717817850900364 0.003944874225113992 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 6743 16538 AQDPTAFSV True PC9_epitope_Rep5 934.4396113297399 934.43850993586 68.615 2 0.07178125101614805 0.003944874225113992 0.9438714419765777 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 1421 7728 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40194496793 34.678 1 0.07178022920927624 0.003944874225113992 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 96296 7888 SEETPAISP True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 35.287 2 0.07177490475004111 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000128951|P33316-2|DUT'] 34474 19193 GQDGLYIGV True PC9_epitope_Rep4 920.4603467743199 920.4597949679301 81.925 1 0.07177409372985262 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 123525 16115 VIIDDHPEVTV True PC9_epitope_Rep2 1235.63976768827 1235.6386699358602 67.245 2 0.07177305784171004 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 2384 5383 AEQIKHILA True H1975_Epitope_Rep3 1021.5920296502098 1021.59092993586 25.773 2 0.07175635704420634 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000458298.1_1_6:86137181-86137394:-|nuORF', 'ENST00000490277.1_1_13:45913571-45913754:-|nuORF'] 138573 5415 YRPGTVALR True PC9_epitope_Rep4 1031.5876129761098 1031.58650993586 27.559 2 0.07175473922519085 0.003944874225113992 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'H3C13|p.H40Q|1|0.1|ENSG00000183598|chr1:149813562-149813562|G/C|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 72463 23457 MTVDDLLSL True PC9_epitope_Rep5 1005.5052483614099 1005.50414993586 95.211 2 0.07175380927596332 0.003944874225113992 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 63210 3529 LNVTEQEKIDK True NCI_RA007_Epitope_Rep1 1315.69834519355 1315.69669490379 17.65 3 0.0717482159963456 0.003944874225113992 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 108832 4677 TEQQQRFHEI True H1975_Epitope_Rep3 1314.6316626160599 1314.6305699358602 23.114 2 0.07174385894584744 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 16043 9147 EEALPVTTA True H1975_Epitope_Rep2 929.47057710485 929.46948993586 40.135 2 0.0717421589086212 0.003944874225113992 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 70331 8959 LYPPRQPTF True NCI_RA007_Epitope_Rep3 1117.59202965021 1117.59092993586 42.335 2 0.07173782536368338 0.003944874225113992 0.9438714419765777 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 83835 12555 QEFRFLPPP True NCI_RA007_Epitope_Rep3 1129.5920296502097 1129.59092993586 56.625 2 0.07173389464817645 0.003944874225113992 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 98079 3845 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 20.962 2 0.07173308163693293 0.003944874225113992 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 98268 4574 SIFEPAKGGEK True NCI_RA007_Epitope_Rep5 1161.6029882567298 1161.60133490379 24.253 3 0.07172268804262708 0.003944874225113992 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 97790 13820 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.4914349679301 58.002 1 0.07170321685343362 0.003944874225113992 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 24404 18758 FAFPGSTNSL True PC9_epitope_Rep6 1039.49746055903 1039.49636993586 84.793 2 0.07168528190031073 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 40082 15960 HRDDELYIL True PC9_epitope_Rep2 1172.5825871653199 1172.5814899358602 66.642 2 0.07168516503956568 0.003944874225113992 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 118835 2818 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 14.908 2 0.07167711162942042 0.003944874225113992 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 8121 12202 ATESVSLYY True H1975_Epitope_Rep2 1031.48114178855 1031.48004993586 52.017 2 0.07164779379665406 0.003944874225113992 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 47764 12145 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65880490379 51.577 3 0.07164307159297816 0.003944874225113992 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 101945 9743 SPLSSHPVV True PC9_epitope_Rep1 921.49198125577 921.49088993586 42.336 2 0.07162607578617632 0.003944874225113992 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 60285 19221 LIENVASL True PC9_epitope_Rep3 857.4858332461699 857.48472993586 79.153 2 0.07162114886079327 0.003944874225113992 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2', 'nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1'] 22381 6725 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54316490379 30.782 3 0.07161735522721037 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 40070 13570 HRAPIFMRV True PC9_epitope_Rep5 1125.62295293901 1125.6213149037899 57.22 3 0.07161064682744825 0.003944874225113992 0.9438714419765777 ['ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'ENST00000567998.5_1_16:28619793-28620024:-|nuORF'] 9639 11648 AYGHFSYEF True NCI_RA007_Epitope_Rep3 1119.46616043075 1119.4650699358601 52.937 2 0.07159298128769956 0.003944874225113992 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 17673 13721 EHSGPPIVI True PC9_epitope_Rep5 947.5076313199099 947.50652993586 57.804 2 0.07157739594448317 0.003944874225113992 0.9438714419765777 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 42290 11297 IEISELNR True PC9_epitope_Rep2 972.52400966004 972.52290993586 48.777 2 0.07157175833228818 0.003944874225113992 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 107287 13359 SYQKVMALW True NCI_RA007_Epitope_Rep4 1124.5688516774799 1124.56774993586 58.54 2 0.07156968364621834 0.003944874225113992 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 29724 16020 FVPIKVEQI True PC9_epitope_Rep6 1071.63283183303 1071.6317299358602 73.944 2 0.07156847511071458 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 17261 17799 EHASSLLEL True PC9_epitope_Rep3 997.5080252427299 997.50692993586 73.663 2 0.07156686075647416 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 12727 5538 DLGEEHFK True NCI_RA007_Epitope_Rep2 973.4505103666099 973.44940993586 26.158 2 0.0715613854195353 0.003944874225113992 0.9438714419765777 ['CON__P02769'] 95480 20508 SAMEVVPAL True PC9_epitope_Rep3 915.4735543103099 915.47300496793 84.144 1 0.07155220806211098 0.003944874225113992 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 9888 22608 AYNEGIINLL True PC9_epitope_Rep3 1118.5971746003 1118.5960699358602 92.23 2 0.07154435436871216 0.003944874225113992 0.9438714419765777 ['nc|ENSG00000073921|Q13492-4|PICALM', 'PICALM|p.W564*|1|0.36|ENSG00000073921|chr11:85981216-85981216|C/-|frameshift_variant', 'nc|ENSG00000073921|Q13492-3|PICALM', 'nc|ENSG00000073921|Q13492-2|PICALM', 'nc|ENSG00000073921|Q13492-5|PICALM', 'ENSG00000073921|ENST00000393346|PICALM', 'ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 97998 14386 SHSPPLLQV True PC9_epitope_Rep3 976.53418042092 976.53308993586 60.428 2 0.07151953198987974 0.003958322692680934 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 64201 20643 LQIDQINTDL True PC9_epitope_Rep2 1171.60846755999 1171.60736993586 84.838 2 0.07151672704790162 0.003958322692680934 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 39492 6827 HPADSVVSV True PC9_epitope_Rep6 909.4555957470501 909.45448993586 35.121 2 0.07151289087614776 0.003958322692680934 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 105499 14280 SVDDTIVAL True NCI_RA007_Epitope_Rep5 931.4862271689899 931.4856749679301 61.622 1 0.07150750164121704 0.003958322692680934 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 72516 18138 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep5 989.5467196310099 989.54617496793 76.574 1 0.07148846474573967 0.003958322692680934 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 55725 5811 LDDPTVPR True H1975_Epitope_Rep3 911.47124581119 911.47014993586 27.375 2 0.07146504622824319 0.003958322692680934 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153761151-153761283:-|nuORF'] 116940 16809 TYPENWRAF True PC9_epitope_Rep4 1182.5458077337798 1182.54470993586 72.628 2 0.07145403255621995 0.003958322692680934 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 96032 10319 SEALPSDIAA True H1975_Epitope_Rep2 972.47639076128 972.47584496793 44.7 1 0.07144939796596943 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 106816 14762 SYGSVFKAI True PC9_epitope_Rep6 970.5123823471799 970.51128993586 68.735 2 0.07144806166135671 0.003958322692680934 0.9438714419765777 ['STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion', 'ENSG00000104375|ENST00000419617|STK3', 'nc|ENSG00000104375|Q13188-2|STK3'] 118080 6959 VATVSLPR True H1975_Epitope_Rep2 841.5021520166499 841.50104993586 31.688 2 0.07143670555906287 0.003958322692680934 0.9438714419765777 ['CON__P00761'] 72759 18517 NADPILISLK True PC9_epitope_Rep3 1082.63356010902 1082.6324699358602 76.444 2 0.07143179403648847 0.003958322692680934 0.9438714419765777 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 34840 8689 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 38.785 2 0.07143081529623149 0.003958322692680934 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 40144 12899 HRDWVSSQL True PC9_epitope_Rep1 1126.55195574338 1126.5503249037902 54.489 3 0.07142397038132826 0.003958322692680934 0.9438714419765777 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000533676.5_1_11:61641288-61643947:-|nuORF', 'ENST00000529404.5_1_11:61643581-61643947:-|nuORF'] 87899 13702 QVMQGMGVSA True PC9_epitope_Rep1 1006.4575869763398 1006.45648993586 57.556 2 0.07142318925356746 0.003958322692680934 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 45242 15566 IRPENVIIY True PC9_epitope_Rep4 1115.6338944621898 1115.63278993586 67.795 2 0.07142192616551753 0.003958322692680934 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B'] 105494 13551 SVDDGITLY True H1975_Epitope_Rep1 981.46549172441 981.46494496793 57.248 1 0.07141987327616174 0.003958322692680934 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 7936 19731 ATDFGEALV True PC9_epitope_Rep2 921.4443623570098 921.44326993586 81.286 2 0.0714179962944509 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 118929 5942 VEERITQVA True H1975_Epitope_Rep2 1043.56112344475 1043.56002993586 27.838 2 0.07140945705846485 0.003958322692680934 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 311 18767 AAIDWFDGK True PC9_epitope_Rep2 1021.4868958753299 1021.48578993586 77.558 2 0.07139872829582226 0.003958322692680934 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 123307 8933 VHSPPNVGL True PC9_epitope_Rep4 918.49231560894 918.49120993586 41.903 2 0.07139470730546603 0.003958322692680934 0.9438714419765777 ['ENSG00000146247|ENST00000275034|PHIP', 'PHIP|p.G744Efs*5|1|0.13|ENSG00000146247|chr6:78990956-78990956|C/-|frameshift_variant'] 95263 11322 SADPNVVDL True H1975_Epitope_Rep2 928.45017601344 928.44962496793 48.599 1 0.07138612065673118 0.003958322692680934 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 1107 6370 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 29.429 2 0.07138372384977965 0.003958322692680934 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 3944 12626 AHDTTLVAL True PC9_epitope_Rep4 939.50254593947 939.50199496793 56.404 1 0.07137721992084523 0.003958322692680934 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 35316 13535 GSVDGVIKEV True PC9_epitope_Rep1 1001.5393253710099 1001.53822993586 56.919 2 0.07137603342330749 0.003958322692680934 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2', 'nc|ENSG00000119655|P61916-2|NPC2', 'ENST00000554482.1_1_14:74947450-74959914:-|nuORF'] 53832 16301 KYGIVQEF True PC9_epitope_Rep3 982.5123823471799 982.51128993586 67.838 2 0.0713697744460677 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000149639|O94964-1|MTCL2', 'ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-3|MTCL2'] 134354 13019 WSDQNIEYEY True H1975_Epitope_Rep1 1345.54626122625 1345.54516993586 55.161 2 0.07136044859571616 0.003958322692680934 0.9438714419765777 ['ENSG00000196757|ENST00000254321|ZNF700'] 70738 17176 MEALPLLAA True H1975_Epitope_Rep1 927.5099398190299 927.50939496793 71.517 1 0.07135848184360392 0.003958322692680934 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 9964 12570 AYSAKIALF True NCI_RA007_Epitope_Rep4 982.5487678558999 982.54766993586 55.368 2 0.07135039955290295 0.003958322692680934 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF', 'DPYD|p.G194C|1|0.39|ENSG00000188641|chr1:97699451-97699451|C/A|missense_variant'] 14064 10845 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep2 1086.45394144498 1086.45337496793 46.745 1 0.07134221244143762 0.003958322692680934 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 20437 6781 EPQYPVRSA True PC9_epitope_Rep1 1045.5192586327698 1045.5181699358602 30.888 2 0.07132760783066595 0.003958322692680934 0.9438714419765777 ['ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 61219 9450 LLDPSQKNLY True H1975_Epitope_Rep1 1189.63428838501 1189.6331899358602 41.266 2 0.07132507317117459 0.003958322692680934 0.9438714419765777 ['ENSG00000223547|ENST00000439326|ZNF844', 'ENSG00000257446|ENST00000547628|ZNF878', 'ENSG00000277462|ENST00000366503|ZNF670'] 88613 16247 RALTVPEL True PC9_epitope_Rep5 897.5283667644899 897.52726993586 67.483 2 0.07131811830553716 0.003958322692680934 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 70468 17736 LYSEVSHLL True PC9_epitope_Rep4 1059.56006081559 1059.5589699358602 76.244 2 0.07131605645067453 0.003958322692680934 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 132894 19224 VYTSVVEEL True PC9_epitope_Rep4 1037.5280919809697 1037.52698993586 82.046 2 0.0713158777215432 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 104646 14943 SSYMHFTNV True PC9_epitope_Rep1 1084.46478053176 1084.4636899358602 62.3 2 0.07130611600425424 0.003958322692680934 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 39530 19034 HPFGFVAV True PC9_epitope_Rep1 872.4544735482399 872.45336993586 78.005 2 0.07130507000678682 0.003958322692680934 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 4058 6674 AHQQSIPAV True PC9_epitope_Rep4 949.4981292653698 949.49702993586 32.847 2 0.07130382696469507 0.003958322692680934 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 73825 12586 NHDVQVIL True PC9_epitope_Rep2 936.50288029264 936.50178993586 53.719 2 0.0712980913853524 0.003958322692680934 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 105684 8902 SVGKPLYL True H1975_Epitope_Rep3 875.5116540711899 875.51054993586 39.24 2 0.07128765111978082 0.003958322692680934 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 109632 14302 THDITTISI True PC9_epitope_Rep4 999.52367530687 999.52256993586 62.913 2 0.07128645192384322 0.003958322692680934 0.9438714419765777 ['ENST00000544258.1_3_12:4598975-4611546:-|nuORF', 'ENSG00000047621|ENST00000261250|C12orf4'] 107628 6157 TAHFEQNTL True NCI_RA007_Epitope_Rep3 1059.49852318819 1059.49742993586 31.219 2 0.07128583222558113 0.003958322692680934 0.9438714419765777 ['ENSG00000153975|ENST00000368576|ZUP1'] 28700 18314 FSTTVIQNV True PC9_epitope_Rep2 1007.5287606873098 1007.52766993586 75.771 2 0.07127938053835799 0.003958322692680934 0.9438714419765777 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.T122Ifs*2|1|0.21|ENSG00000100554|chr14:67345856-67345859|CCAG/-|frameshift_variant'] 21702 9528 ERYKEVAEL True PC9_epitope_Rep3 1135.5873381925899 1135.58569490379 41.596 3 0.07127297498687547 0.003958322692680934 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 70827 4163 M[Oxidation]EERAQLEA True H1975_Epitope_Rep2 1091.4917239360298 1091.4906299358602 21.114 2 0.07126779437539633 0.003958322692680934 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2'] 126538 17950 VPPAVTGITFL True H1975_Epitope_Rep1 1113.64339651673 1113.6422899358602 74.787 2 0.07125384085741142 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 41051 15494 HYILHNSFF True PC9_epitope_Rep6 1176.5716285587998 1176.5705299358601 71.776 2 0.07124622073431357 0.003958322692680934 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 126509 11480 VPNKFLVTA True PC9_epitope_Rep6 987.5753169569099 987.57420993586 55.229 2 0.07123749835809688 0.003958322692680934 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 95400 9608 SAIQSISHV True PC9_epitope_Rep2 940.4977949122 940.49668993586 42.3 2 0.07123331501550388 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 105394 9184 SVADTVARV True PC9_epitope_Rep4 916.4977949121999 916.49668993586 42.92 2 0.07123239174509015 0.003958322692680934 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 1361 7154 AEEEAAVVAA True H1975_Epitope_Rep3 958.4607406971397 958.4601949679301 32.49 1 0.07121698286759859 0.003958322692680934 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 99112 20636 SLAGGIIGV True PC9_epitope_Rep1 785.46470387877 785.4641549679301 84.198 1 0.07121653328407619 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 31900 10731 GEQLSFAA True H1975_Epitope_Rep2 821.3919328613299 821.3913849679301 46.305 1 0.0712132476568233 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENSG00000204843|ENST00000628224|DCTN1', 'ENST00000466110.5_1_2:74593906-74595252:-|nuORF'] 34588 20070 GQGEVLVYV True PC9_epitope_Rep5 962.5072969667398 962.5067449679301 82.252 1 0.07120394898598166 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 2200 14465 AENPDIFAV True H1975_Epitope_Rep2 974.4709114580199 974.4703649679301 60.795 1 0.07119697534517029 0.003958322692680934 0.9438714419765777 ['ENSG00000139514|ENST00000380752|SLC7A1'] 97787 13613 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 57.218 2 0.07119326776783876 0.003958322692680934 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 101645 20136 SPFLNNVEV True PC9_epitope_Rep2 1017.51311062317 1017.51200993586 82.864 2 0.07119193084009104 0.003958322692680934 0.9438714419765777 ['ENSG00000113504|ENST00000264930|SLC12A7', 'nc|ENSG00000113504|Q9Y666-2|SLC12A7'] 11778 8194 DHIKDSFHSL True PC9_epitope_Rep2 1197.57783613805 1197.57619490379 36.876 3 0.07118555588743561 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 57177 5440 LEERYVPRA True H1975_Epitope_Rep3 1131.6036569630699 1131.60254993586 25.984 2 0.07118279125328776 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 41441 20492 IAVNAVLTV True PC9_epitope_Rep2 898.5487678559 898.54766993586 84.253 2 0.07118237501526797 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 89829 6807 RFKTQPVTF True NCI_RA007_Epitope_Rep3 1122.6185787512197 1122.61748993586 33.88 2 0.0711813680364624 0.003958322692680934 0.9438714419765777 ['ENSG00000187479|ENST00000617612|C11orf96', 'nc|nan|Q7Z7L8|C11orf96'] 6697 9532 AQASDLEKI True PC9_epitope_Rep2 973.50802524273 973.50692993586 42.012 2 0.07118090486495225 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530666.1_1_11:764238-764842:+|nuORF'] 46449 11503 ITLTGVHQV True PC9_epitope_Rep2 966.5498304850602 966.54872993586 49.57 2 0.07117863786158879 0.003958322692680934 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion'] 32085 7857 GEYDHLPEQA True H1975_Epitope_Rep3 1157.4989171110099 1157.4978299358602 35.198 2 0.071156740927415 0.003958322692680934 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 2607 7654 AESLQPVAA True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 34.395 2 0.07115619788800669 0.003958322692680934 0.9438714419765777 ['ENSG00000038219|ENST00000040738|BOD1L1'] 85283 5883 QKSLSLSPG True NCI_RA007_Epitope_Rep4 915.5025459394699 915.50144993586 29.252 2 0.07115149621621052 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 1133 7905 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.4539849679301 35.38 1 0.07114851243257923 0.003958322692680934 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 40205 4483 HRGTGIAL True PC9_epitope_Rep4 823.46643521427 823.46532993586 23.716 2 0.0711295792940283 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 11843 15316 DHMRFISEL True PC9_epitope_Rep6 1146.54917886206 1146.5480899358602 71.034 2 0.07110056554081565 0.003958322692680934 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 46750 18035 IVAPGTFEV True PC9_epitope_Rep6 931.5014833103099 931.50038993586 82.002 2 0.07108763145771302 0.003958322692680934 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 75982 9168 NRIANPDQL True PC9_epitope_Rep1 1039.5410567065098 1039.53994993586 40.114 2 0.07108418250933927 0.003958322692680934 0.9438714419765777 ['ENSG00000117528|ENST00000370214|ABCD3', 'nc|ENSG00000117528|P28288-3|ABCD3', 'nc|ENSG00000117528|P28288-2|ABCD3'] 122820 8429 VGVNGFGR True PC9_epitope_Rep1 804.4242360491198 804.42312993586 37.258 2 0.07107998029626231 0.003958322692680934 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 70876 7493 MEGPTPVSA True H1975_Epitope_Rep2 887.4058686733099 887.40476993586 33.771 2 0.07107607770128826 0.003958322692680934 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 39375 13015 HLVDEPQNLIK True PC9_epitope_Rep5 1304.7088503076 1304.7077499358602 55.069 2 0.07107558003662513 0.003958322692680934 0.9438714419765777 ['CON__P02769'] 2677 11555 AETAVSVIP True H1975_Epitope_Rep1 885.48074786573 885.47964993586 49.432 2 0.07107082723382388 0.003958322692680934 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 35052 19804 GRDLTDYLM True PC9_epitope_Rep3 1082.50664534374 1082.50554993586 81.408 2 0.07105642669180098 0.003958322692680934 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 105971 20110 SVLGSLSSV True PC9_epitope_Rep3 847.4650978015901 847.46454496793 82.605 1 0.07105577274508991 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF'] 60613 16171 LISQIVSSITA True H1975_Epitope_Rep3 1130.6546894764201 1130.65358993586 67.659 2 0.07105511103350295 0.003958322692680934 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 1293 14904 AEDTISILP True H1975_Epitope_Rep1 957.5018772331299 957.50078993586 62.566 2 0.07105401673656547 0.003958322692680934 0.9438714419765777 ['ENSG00000258289|ENST00000549115|CHURC1', 'nc|ENSG00000258289|Q8WUH1-2|CHURC1', 'nc|ENSG00000258289|Q8WUH1-1|CHURC1'] 72025 18127 MQMSPALTC True PC9_epitope_Rep1 980.4129452830399 980.41184993586 74.516 2 0.07105093762411287 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 140652 20203 YYPEYKLLF True PC9_epitope_Rep4 1234.62741209942 1234.62630993586 85.848 2 0.07104667175665319 0.003958322692680934 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 57461 10216 LEIVNPQAA True H1975_Epitope_Rep1 953.51819600361 953.51708993586 44.237 2 0.0710453722570627 0.003958322692680934 0.9438714419765777 ['ENSG00000105618|ENST00000321030|PRPF31', 'ENST00000466404.5_1_19:54631532-54634860:+|nuORF'] 47480 18513 IYKFITERF True PC9_epitope_Rep3 1215.6651945904698 1215.66355490379 76.429 3 0.07103848665890436 0.003958322692680934 0.9438714419765777 ['ENSG00000178919|ENST00000375123|FOXE1'] 115717 8792 TVLERVEGA True PC9_epitope_Rep6 972.5240096600398 972.52290993586 43.719 2 0.07103690245138196 0.003958322692680934 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 24287 20149 FAAPLILL True H1975_Epitope_Rep1 856.54222592348 856.54167496793 83.853 1 0.07102710053819845 0.003958322692680934 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 97830 13734 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.4914349679301 57.851 1 0.07102182431636378 0.003958322692680934 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 17635 13364 EHNSTIIVM True PC9_epitope_Rep5 1042.51173072418 1042.5106299358602 56.42 2 0.07101842637299138 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 34991 8628 GRADGYVL True PC9_epitope_Rep6 849.43446637965 849.43336993586 43.003 2 0.07100441877085044 0.003958322692680934 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 118706 4251 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 21.468 2 0.07095541110358564 0.003958322692680934 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 4143 17679 AHVPTLQVL True PC9_epitope_Rep3 976.5705659296399 976.56946993586 73.198 2 0.07094933287578042 0.003958322692680934 0.9438714419765777 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF', 'ENST00000592624.1_1_19:1242319-1242811:+|nuORF'] 67828 20765 LTIEDGIFEV True PC9_epitope_Rep6 1134.58085582982 1134.5802749679299 92.631 1 0.07093509333030974 0.003958322692680934 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 86104 11769 QPQPQPYAV True PC9_epitope_Rep1 1026.5134449763398 1026.51287496793 50.142 1 0.07092906564266548 0.003958322692680934 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 39137 6355 HLDTLTEHY True H1975_Epitope_Rep2 1127.52473793603 1127.52364993586 29.372 2 0.07091526380532333 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 117559 10342 VAGGAVYL True H1975_Epitope_Rep2 748.4119400299201 748.41139496793 44.788 1 0.07090793455569615 0.003958322692680934 0.9438714419765777 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 47348 10693 IYHNPTANSF True PC9_epitope_Rep3 1162.54072235334 1162.5396299358601 46.078 2 0.07090196176570442 0.003958322692680934 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 14805 20926 DYATIFNNL True PC9_epitope_Rep6 1069.5080252427301 1069.5069299358602 93.266 2 0.07089997736377239 0.003958322692680934 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 5182 21077 ALPEIFTEL True PC9_epitope_Rep6 1031.55391280599 1031.55337496793 93.896 1 0.07089533915710952 0.003958322692680934 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 1130 7996 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 35.707 1 0.07089152054512315 0.003958322692680934 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 125982 9846 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.49088993586 43.207 2 0.07089031302053442 0.003958322692680934 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 140356 5401 YYEHVKARF True PC9_epitope_Rep6 1211.60874234351 1211.60710490379 28.663 3 0.07088663011605241 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 47547 23291 IYLTFPVAM True PC9_epitope_Rep1 1053.55689001145 1053.55637496793 94.376 1 0.07088533521785498 0.003958322692680934 0.9438714419765777 ['ENST00000601829.1_1_19:7694719-7695635:+|nuORF', 'ENSG00000229833|ENST00000594797|PET100'] 99466 20114 SLELNVIVTV True PC9_epitope_Rep4 1085.63322575585 1085.6321299358601 85.503 2 0.07088341445551989 0.003958322692680934 0.9438714419765777 ['ENSG00000156886|ENST00000389202|ITGAD'] 139958 18896 YVIELQHVV True PC9_epitope_Rep2 1098.60734536118 1098.6062499358602 78.047 2 0.07087780021163671 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000470113.2_1_3:49135784-49136686:-|nuORF', 'ENST00000494984.5_1_3:49135981-49136101:-|nuORF'] 61732 21732 LLIPGLATA True PC9_epitope_Rep3 867.54295419947 867.5424049679301 88.886 1 0.07087500553486079 0.003958322692680934 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 140600 17463 YYLTPDGQRF True PC9_epitope_Rep5 1258.59823722946 1258.5971499358602 72.172 2 0.07087090661677352 0.003958322692680934 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 107410 18761 SYTSGLETL True PC9_epitope_Rep1 969.4654917244101 969.46438993586 76.952 2 0.07086608502682602 0.003958322692680934 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 11468 21680 DGAGFLINLID True H1975_Epitope_Rep1 1146.5920892198599 1146.59098993586 90.084 2 0.0708582745232754 0.003958322692680934 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 3958 13195 AHDVDPIEL True PC9_epitope_Rep6 1007.4923751785899 1007.49126993586 62.399 2 0.07085617851838848 0.003958322692680934 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000473054.1_1_14:68805457-68806021:-|nuORF'] 62907 11858 LMVDHVTEV True PC9_epitope_Rep6 1041.51648175145 1041.5153899358602 56.822 2 0.07085055347360031 0.003958322692680934 0.9438714419765777 ['ENST00000602875.5_1_5:139930287-139937028:-|nuORF', 'ENSG00000213523|ENST00000336283|SRA1'] 44214 8241 ILSGVVTK True PC9_epitope_Rep3 815.51165407119 815.51054993586 36.676 2 0.07084836945159174 0.003958322692680934 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 11671 10131 DHDITSQL True PC9_epitope_Rep4 927.42977492203 927.42866993586 46.644 2 0.07084591333786923 0.003958322692680934 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 89789 16628 RFEEAHFTF True PC9_epitope_Rep5 1182.5458077337796 1182.54415490379 68.966 3 0.07083139474147065 0.003958322692680934 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 107949 20367 TAYDNFVEL True PC9_epitope_Rep4 1070.49204082542 1070.49147496793 86.486 1 0.07082954294200602 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 3939 13267 AHDTTLVAL True PC9_epitope_Rep2 939.50254593947 939.50199496793 56.307 1 0.07081874969216714 0.003958322692680934 0.9438714419765777 ['ENSG00000134575|ENST00000672073|ACP2'] 101541 10513 SPAPQGVTV True PC9_epitope_Rep5 854.4497820906199 854.44868993586 45.425 2 0.07080035758497091 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'TULP3-GGNBP2|1|fusion'] 72462 22553 MTVDDLLSL True PC9_epitope_Rep4 1005.5052483614099 1005.50414993586 94.988 2 0.07078539293778231 0.003958322692680934 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 33343 7162 GLDVEDVK True NCI_RA007_Epitope_Rep2 873.4443623570099 873.44326993586 32.48 2 0.07078450146992266 0.003958322692680934 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 38530 8083 HHDSSTFTL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 36.449 2 0.07077683583631283 0.003958322692680934 0.9438714419765777 ['ENSG00000106397|ENST00000223127|PLOD3'] 24592 21679 FAMEIDPSL True PC9_epitope_Rep5 1021.4790336135699 1021.47792993586 88.436 2 0.07076068411570742 0.003958322692680934 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 2825 16635 AEVISLFSA True H1975_Epitope_Rep3 935.49639792987 935.4958449679301 69.495 1 0.07074719878299865 0.003958322692680934 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 106893 19641 SYILRPVAF True PC9_epitope_Rep2 1064.60186605792 1064.6007699358602 80.934 2 0.07074508208187687 0.003958322692680934 0.9438714419765777 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.G520Afs*35|1|0.16|ENSG00000156222|chr15:84935495-84935495|G/-|frameshift_variant'] 102757 2550 SQEGRPVQV True PC9_epitope_Rep4 998.5145076054997 998.51340993586 14.721 2 0.07073947817818674 0.0039817249036473625 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 33336 20000 GLDSQFVEV True PC9_epitope_Rep2 992.4814761417199 992.48036993586 82.332 2 0.07072671536308535 0.0039817249036473625 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 27703 10242 FQDKNHLYL True PC9_epitope_Rep2 1176.5927579262 1176.59110490379 44.73 3 0.07070932086455896 0.0039817249036473625 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 34532 5215 GQEDHYNNL True PC9_epitope_Rep6 1088.45230127176 1088.45120993586 27.827 2 0.07070036542414283 0.0039817249036473625 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 76625 6189 NTIDPSHPM True NCI_RA007_Epitope_Rep3 1010.4491304676201 1010.44802993586 31.353 2 0.07069983132827183 0.0039817249036473625 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 135637 7071 YEERVQAVVA True H1975_Epitope_Rep2 1162.59823722946 1162.5971499358602 32.127 2 0.07069979689758842 0.0039817249036473625 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 132902 11906 VYTTNIQEL True NCI_RA007_Epitope_Rep5 1079.54989005471 1079.5487899358602 52.453 2 0.07069704798839596 0.0039817249036473625 0.9438714419765777 ['ENSG00000110031|ENST00000395074|LPXN', 'nc|ENSG00000110031|O60711-2|LPXN', 'ENST00000529915.1_1_11:58322280-58343350:-|nuORF'] 1265 7711 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 34.644 2 0.07068578917213253 0.0039817249036473625 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 68695 22487 LVDDNYFYL True PC9_epitope_Rep3 1160.5389910178399 1160.5378899358602 91.771 2 0.07068578127886445 0.0039817249036473625 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 104627 10190 SSVPGVRLLQ True NCI_RA007_Epitope_Rep5 1054.61349337078 1054.6123899358602 45.829 2 0.07068315412570143 0.0039817249036473625 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 110120 17813 TIAQLVHAV True PC9_epitope_Rep5 950.5549158654999 950.55380993586 73.536 2 0.07068149011197165 0.0039817249036473625 0.9438714419765777 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 113412 16786 TQLPESTSLRL True PC9_epitope_Rep1 1243.67721582615 1243.67610993586 69.392 2 0.07066925066066382 0.0039817249036473625 0.9438714419765777 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000567743.5_1_16:66851261-66857485:-|nuORF'] 5046 19990 ALLGGLVNV True PC9_epitope_Rep6 854.52255310806 854.52144993586 89.558 2 0.07066081483829888 0.0039817249036473625 0.9438714419765777 ['nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-3|PAQR4'] 130946 19615 VVINYTEQL True PC9_epitope_Rep1 1077.57062549929 1077.5695299358601 80.276 2 0.07063641889819948 0.0039817249036473625 0.9438714419765777 ['ENSG00000095015|ENST00000399503|MAP3K1'] 26582 6403 FKDLGEEHFK True PC9_epitope_Rep4 1248.6138872935996 1248.61225490379 31.72 3 0.07063355750375463 0.0039817249036473625 0.9438714419765777 ['CON__P02769'] 8609 8561 AVAISLPK True H1975_Epitope_Rep3 797.50108938749 797.49998993586 37.918 2 0.07062737518267083 0.0039817249036473625 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 17523 12442 EHINEGETAML True PC9_epitope_Rep5 1242.55505208814 1242.5539499358601 52.859 2 0.07062088482008681 0.0039817249036473625 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 84115 17874 QEQLLAILP True H1975_Epitope_Rep1 1023.5964463243098 1023.59587496793 74.443 1 0.07060549690834636 0.0039817249036473625 0.9438714419765777 ['ENSG00000171222|ENST00000305978|SCAND1'] 94757 14316 RYLPDTLLL True NCI_RA007_Epitope_Rep3 1102.63864548946 1102.63754993586 63.629 2 0.07059688071516788 0.0039817249036473625 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 16823 19006 EFNSTPAVF True PC9_epitope_Rep4 1010.4709114580198 1010.4703749679301 81.197 1 0.07058394821226122 0.0039817249036473625 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 108752 8676 TENSFVVSS True H1975_Epitope_Rep2 968.445090633 968.44398993586 38.333 2 0.07057628059987595 0.0039817249036473625 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 39691 9742 HPTWALKEA True PC9_epitope_Rep1 1051.5450794577898 1051.54398993586 42.332 2 0.07057084077790524 0.004005919575423556 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 102311 6473 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48104993586 29.704 2 0.07056917112652933 0.004005919575423556 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 106534 17126 SVVSPSSFENV True PC9_epitope_Rep6 1150.5506183307 1150.5495299358602 78.458 2 0.07056366488690533 0.004005919575423556 0.9438714419765777 ['nc|ENSG00000289694|P60953-1|CDC42', 'ENSG00000070831|ENST00000656825|CDC42'] 88962 3269 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 16.599 2 0.07056180422688581 0.004005919575423556 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 113118 11833 TQAPGNPVL True PC9_epitope_Rep2 895.4763311916299 895.4752299358599 50.846 2 0.07055819998657477 0.004005919575423556 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 35004 10188 GRAPGGLSL True PC9_epitope_Rep2 826.4661008611 826.4650099358599 44.526 2 0.07055797641089696 0.004005919575423556 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 86050 19796 QPLPVILHV True PC9_epitope_Rep2 1014.6226015025001 1014.62150993586 81.535 2 0.07055337770348784 0.004005919575423556 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ATF7IP|p.S777C|1|0.33|ENSG00000171681|chr12:14460666-14460666|C/G|missense_variant'] 123404 8602 VIDPVAPRY True H1975_Epitope_Rep1 1028.5654805492 1028.5643899358602 38.016 2 0.07055320969188968 0.004005919575423556 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 130288 21159 VTTDVSYLL True PC9_epitope_Rep3 1009.53317736141 1009.53208993586 86.674 2 0.07054745482589982 0.004005919575423556 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 45015 23676 IQLTALWPIAA True PC9_epitope_Rep1 1195.69649471875 1195.69538993586 95.861 2 0.07054722410762179 0.004005919575423556 0.9438714419765777 ['ENST00000525647.1_1_11:118133556-118134958:-|nuORF', 'ENST00000527282.1_1_11:118133507-118134958:-|nuORF', 'ENSG00000149573|ENST00000278937|MPZL2', 'ENST00000529376.5_1_11:118130767-118134958:-|nuORF'] 135623 4974 YEEPPQKPP True H1975_Epitope_Rep3 1083.5236753068698 1083.52256993586 24.26 2 0.07054375606492505 0.004005919575423556 0.9438714419765777 ['ENSG00000064999|ENST00000360359|ANKS1A'] 74893 10983 NLQTVNVDEN True PC9_epitope_Rep5 1144.53603089572 1144.5349299358602 47.236 2 0.07052916012550181 0.004005919575423556 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 105781 21610 SVIEQIVYV True PC9_epitope_Rep5 1048.580461907 1048.57936993586 88.164 2 0.07052792156756697 0.004005919575423556 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 14858 8796 DYFEQYGK True NCI_RA007_Epitope_Rep4 1048.4501760134401 1048.44906993586 40.646 2 0.07052073667130641 0.004027529951567678 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'ENST00000521638.1_1_5:153717591-153717873:-|nuORF'] 17197 14919 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 62.647 2 0.07051827466946398 0.004027529951567678 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 6007 7986 APLLQPRAA True PC9_epitope_Rep2 935.5552502186699 935.55414993586 36.081 2 0.07051734225690916 0.004027529951567678 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 94656 13475 RYLEGTSCI True PC9_epitope_Rep5 1040.4960806600398 1040.49498993586 56.849 2 0.07051135438310914 0.004027529951567678 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 34961 16064 GQWYGPNTV True PC9_epitope_Rep4 1020.4664947839199 1020.46538993586 69.724 2 0.0705104334283169 0.004027529951567678 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 76271 10506 NSDPGLAVGY True H1975_Epitope_Rep1 991.46107505031 991.46052496793 45.366 1 0.07050397370926849 0.004027529951567678 0.9438714419765777 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 30440 10780 GAGAPVYL True H1975_Epitope_Rep3 746.3962899657799 746.39574496793 46.545 1 0.07050285111171052 0.004027529951567678 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 92309 9559 RQLPAMTAL True NCI_RA007_Epitope_Rep3 999.5535359665099 999.55242993586 44.687 2 0.0704902899087656 0.004027529951567678 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 87716 21081 QVEEELFSV True PC9_epitope_Rep5 1078.51825557326 1078.51767496793 86.15 1 0.07048381880572248 0.004027529951567678 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 31460 9947 GEEEPPALP True H1975_Epitope_Rep1 937.4392769765698 937.43872496793 43.198 1 0.0704829210512051 0.004027529951567678 0.9438714419765777 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 92646 19648 RRFMQTFVL True PC9_epitope_Rep5 1196.64883333368 1196.64718490379 80.632 3 0.07048006353544743 0.004027529951567678 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 113229 17310 TQDTPIPAL True PC9_epitope_Rep6 954.5022115862998 954.50110993586 79.193 2 0.07047656497255415 0.004027529951567678 0.9438714419765777 ['MINDY4|p.W431*|2|0.17|ENSG00000106125|chr7:30839252-30839252|G/-|frameshift_variant', 'ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 46274 15936 ITDYLIEEV True H1975_Epitope_Rep2 1093.55430672881 1093.5532099358602 66.497 2 0.0704762364821015 0.004027529951567678 0.9438714419765777 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 103005 20344 SQITEYFSV True PC9_epitope_Rep4 1072.5076908895599 1072.5065899358601 86.399 2 0.07047125702096153 0.004027529951567678 0.9438714419765777 ['ENSG00000158435|ENST00000289382|CNOT11'] 109776 13678 THISDTSVVL True PC9_epitope_Rep5 1070.56078909158 1070.56027496793 57.637 1 0.07046311634632893 0.004027529951567678 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 25388 20257 FEILPGLSV True H1975_Epitope_Rep1 973.54843350273 973.54732993586 84.267 2 0.07045317226103072 0.004027529951567678 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 34792 6133 GQTGVIRSV True PC9_epitope_Rep2 915.5137793295099 915.51268993586 28.985 2 0.07045073930539994 0.004027529951567678 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 96675 6933 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.4183249679301 31.588 1 0.07044745598701545 0.004027529951567678 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 84064 12735 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57746993586 54.088 2 0.07044246003201252 0.004027529951567678 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 111340 21903 TLIEDILGV True PC9_epitope_Rep6 971.5539128059899 971.55280993586 97.152 2 0.0704405939142568 0.004027529951567678 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 76777 13905 NVDESLLGY True H1975_Epitope_Rep2 1008.4763907612798 1008.47528993586 58.632 2 0.07043911949205241 0.004027529951567678 0.9438714419765777 ['ENSG00000172890|ENST00000319023|NADSYN1', 'ENST00000531236.1_1_11:71196518-71209628:+|nuORF', 'nc|ENSG00000172890|Q6IA69-2|NADSYN1'] 32786 9658 GIDSSSPEV True PC9_epitope_Rep2 889.4028914678499 889.40234496793 42.489 1 0.07043883494107007 0.004027529951567678 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 86112 10700 QPQPQPYAV True PC9_epitope_Rep4 1026.5134449763398 1026.51287496793 48.91 1 0.07043805433307095 0.004027529951567678 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 48530 11677 KEFPGFLEN True NCI_RA007_Epitope_Rep5 1079.5287606873098 1079.52766993586 51.569 2 0.07042692450059687 0.004027529951567678 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 20635 16633 EQFHQFLEA True PC9_epitope_Rep5 1147.52982331647 1147.5287299358602 68.985 2 0.07041454507189526 0.004027529951567678 0.9438714419765777 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF'] 83022 11086 PYKVTQDEL True PC9_epitope_Rep3 1091.54989005471 1091.5487899358602 47.64 2 0.07040706800496421 0.004027529951567678 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 38154 6663 HERAIDFSP True NCI_RA007_Epitope_Rep5 1070.5145076055 1070.5134099358602 32.298 2 0.07038499299376724 0.004027529951567678 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 117803 18118 VAMLPGLAL True NCI_RA007_Epitope_Rep4 883.5201105799099 883.51956496793 78.397 1 0.0703772258451878 0.004027529951567678 0.9438714419765777 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 61978 15755 LLLPGELAK True PC9_epitope_Rep4 952.5957180483199 952.59462993586 68.525 2 0.07037166539127962 0.004027529951567678 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 2218 7760 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.43850993586 34.803 2 0.07036632535751193 0.004027529951567678 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 40400 9363 HRVEEEHVIL True PC9_epitope_Rep1 1259.6622344683499 1259.66059490379 40.872 3 0.070365219140755 0.004027529951567678 0.9438714419765777 ['ENSG00000136381|ENST00000258886|IREB2'] 43456 6165 IHSSSTVL True PC9_epitope_Rep3 842.44978209062 842.44868993586 28.757 2 0.0703637577896211 0.004027529951567678 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 38695 9195 HHSGNTYFL True PC9_epitope_Rep2 1074.48829285766 1074.4871899358602 40.71 2 0.07036141871642561 0.004027529951567678 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 113381 19098 TQLGPPYHIL True PC9_epitope_Rep3 1137.61824439805 1137.6171499358602 78.684 2 0.07035792557963091 0.004027529951567678 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 140749 17981 YYQRGSSMVLF True PC9_epitope_Rep4 1349.64380752289 1349.64270993586 77.218 2 0.0703416208153096 0.004027529951567678 0.9438714419765777 ['ENSG00000171867|ENST00000379440|PRNP'] 118864 8598 VEELGPPSA True H1975_Epitope_Rep2 897.4443623570099 897.44326993586 38.026 2 0.07033534434154247 0.004027529951567678 0.9438714419765777 ['ENSG00000112511|ENST00000374516|PHF1', 'ENST00000486845.1_1_6:33382534-33383872:+|nuORF', 'ENST00000374512.7_2_6:33381598-33383628:+|nuORF'] 136480 17525 YHIDVGTQTF True PC9_epitope_Rep1 1179.5560380643099 1179.5549499358601 72.204 2 0.0703260464709231 0.004027529951567678 0.9438714419765777 ['ENSG00000118496|ENST00000237281|FBXO30'] 109890 11578 THNIIVNQL True PC9_epitope_Rep6 1050.5821932425 1050.58108993586 55.645 2 0.07032471945940576 0.004027529951567678 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'GET3|p.V281I|1|0.41|ENSG00000198356|chr19:12747518-12747518|G/A|missense_variant'] 5865 16379 APGNPVLAV True PC9_epitope_Rep2 836.4756029156399 836.4745099358599 68.248 2 0.07029923904255413 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 42266 5563 IEIDGTEKA True H1975_Epitope_Rep3 974.49204082542 974.49094993586 26.439 2 0.07029782833028678 0.0040433323161428135 0.9438714419765777 ['ENSG00000154727|ENST00000400075|GABPA', 'ENST00000419271.1_1_7:63353684-63354623:+|nuORF'] 26022 15294 FHDGDSVVF True PC9_epitope_Rep5 1021.4505103666099 1021.44940993586 63.839 2 0.07029701059705197 0.0040433323161428135 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant', 'ENST00000483715.5_1_3:49712632-49712743:+|nuORF'] 38892 16324 HIIGGVIAV True PC9_epitope_Rep4 877.53853752537 877.53744993586 70.754 2 0.07028873389369897 0.0040433323161428135 0.9438714419765777 ['ENST00000550528.5_1_12:58133675-58140075:+|nuORF', 'ENST00000546993.5_1_12:58138937-58140584:+|nuORF', 'ENSG00000135452|ENST00000257910|TSPAN31'] 94918 12990 RYPDRITLI True PC9_epitope_Rep6 1145.65569253593 1145.65405490379 61.543 3 0.07027601654914427 0.0040433323161428135 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 102485 8620 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 38.106 2 0.07026688316965962 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 27283 24462 FLYPFPLAL True PC9_epitope_Rep1 1079.60555445603 1079.6044499358602 98.935 2 0.07026031879941677 0.0040433323161428135 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 115138 4903 TVADHIQKV True PC9_epitope_Rep2 1009.5556441414899 1009.55454993586 24.224 2 0.07025525018040611 0.0040433323161428135 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 26474 17627 FIPPDGNFRL True PC9_epitope_Rep6 1174.61349337078 1174.6123899358602 80.443 2 0.07025390889561223 0.0040433323161428135 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 115817 14902 TVMDSKIVQV True PC9_epitope_Rep1 1118.60054572858 1118.59944993586 62.14 2 0.07024157913988145 0.0040433323161428135 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 15353 18362 EALFQPSFL True H1975_Epitope_Rep3 1050.53859709502 1050.53750993586 76.97 2 0.0702406039253634 0.0040433323161428135 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 116358 19093 TVYEGFISA True PC9_epitope_Rep4 985.4756624852898 985.47511496793 81.532 1 0.07023973651946021 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 107090 21845 SYMFVDENTF True PC9_epitope_Rep1 1251.5117902938298 1251.51068993586 88.836 2 0.07023342788557901 0.0040433323161428135 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 135765 16088 YENELMLMA True H1975_Epitope_Rep2 1112.48821839828 1112.4871299358601 67.09 2 0.07023119376664116 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 24380 13376 FAENNFTEL True NCI_RA007_Epitope_Rep3 1083.48728979815 1083.48618993586 59.884 2 0.07021042878600477 0.0040433323161428135 0.9438714419765777 ['ENSG00000066336|ENST00000378538|SPI1', 'nc|ENSG00000066336|P17947-2|SPI1'] 104681 7186 STAGLIIGK True NCI_RA007_Epitope_Rep5 858.51746772762 858.51636993586 34.32 2 0.07020869492038288 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA1|p.G190R|1|0.35|ENSG00000139910|chr14:26448915-26448915|C/T|missense_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 116882 9880 TYNSSGAYRF True PC9_epitope_Rep4 1164.5199869087598 1164.5188899358602 45.654 2 0.07020709679769772 0.0040433323161428135 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 30611 7350 GALALEEK True PC9_epitope_Rep1 829.4545331178899 829.45342993586 33.083 2 0.07016848185654236 0.0040433323161428135 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 140362 13886 YYEKLHTYF True PC9_epitope_Rep2 1262.5971746003 1262.59552490379 58.693 3 0.07016601295369063 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 35562 13813 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.51670993586 61.027 2 0.0701635110895117 0.0040433323161428135 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 65072 16886 LSDLGLLSY True H1975_Epitope_Rep3 979.52261267771 979.5220649679301 70.504 1 0.07012746732903266 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 23709 18087 EYIKFLRSI True PC9_epitope_Rep2 1167.6651945904698 1167.66355490379 74.874 3 0.07012407363461344 0.0040433323161428135 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 68263 18339 LTRGIITEI True PC9_epitope_Rep6 1014.6073453611799 1014.60624993586 83.183 2 0.0700980570644725 0.0040433323161428135 0.9438714419765777 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000264874.7_1_6:7397003-7402949:+|nuORF'] 72371 9563 MTEEEQIAY True H1975_Epitope_Rep1 1112.4695911286797 1112.4684899358601 41.709 2 0.07008966899849835 0.0040433323161428135 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 26384 12045 FIIPNVVK True H1975_Epitope_Rep1 928.57458868092 928.57348993586 51.341 2 0.07008796701001604 0.0040433323161428135 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF'] 38847 12336 HIGDAVVI True PC9_epitope_Rep4 822.4599528515 822.45884993586 55.259 2 0.07008140021546241 0.0040433323161428135 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 24313 18824 FADGFVLVY True H1975_Epitope_Rep2 1029.51713337445 1029.51657496793 78.161 1 0.07007973226019368 0.0040433323161428135 0.9438714419765777 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 27792 19793 FQEGDIILV True PC9_epitope_Rep6 1032.5491617787197 1032.5485749679299 88.79 1 0.07006544266648632 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 123539 15284 VIIEKTYSL True PC9_epitope_Rep5 1064.61176203528 1064.6106699358602 63.799 2 0.07005953432218485 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 73826 12675 NHDVQVIL True PC9_epitope_Rep2 936.50288029264 936.50178993586 54.063 2 0.07005680504653966 0.0040433323161428135 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 75302 18548 NPTLILAA True PC9_epitope_Rep4 811.4803539429099 811.47924993586 79.42 2 0.07005145781550183 0.0040433323161428135 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 11967 16532 DHTLGNII True PC9_epitope_Rep5 881.46068112749 881.45958993586 68.592 2 0.07003707635076535 0.0040433323161428135 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 100482 12189 SLPKGVVEV True PC9_epitope_Rep2 926.54368247546 926.5431349679301 52.198 1 0.07003205213975018 0.0040433323161428135 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 126691 6562 VPRPETAVA True PC9_epitope_Rep3 938.5185303567798 938.51742993586 30.265 2 0.07002773671056832 0.0040433323161428135 0.9438714419765777 ['ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 35584 12295 GTITDDVRV True PC9_epitope_Rep3 974.50327421546 974.50216993586 52.319 2 0.07002326934396781 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 54391 16737 KYQKGFSLW True PC9_epitope_Rep1 1155.6076797143498 1155.60658993586 69.206 2 0.07002167447673606 0.0040433323161428135 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 117082 22036 TYQVLAVTF True PC9_epitope_Rep5 1040.5542471591598 1040.55367496793 89.788 1 0.07001891661297346 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 11846 9984 DHMVSPTAV True PC9_epitope_Rep3 955.44331681119 955.44220993586 43.359 2 0.0700184033201892 0.0040433323161428135 0.9438714419765777 ['ENST00000440593.3_1_19:13255325-13260573:-|nuORF', 'ENSG00000104915|ENST00000587230|STX10'] 108461 9190 TEEPDVHLP True H1975_Epitope_Rep1 1035.48728979815 1035.48618993586 40.257 2 0.0700041919338158 0.0040433323161428135 0.9438714419765777 ['ENSG00000163870|ENST00000355552|TPRA1'] 66811 21243 LSVPGLVSV True PC9_epitope_Rep2 869.52221875489 869.52112993586 87.17 2 0.06997318086156763 0.0040433323161428135 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 47564 21122 IYMDTLNIF True PC9_epitope_Rep6 1128.5525329069999 1128.5514299358601 94.087 2 0.06997293130025897 0.0040433323161428135 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 84558 10469 QHDDQQPVVL True PC9_epitope_Rep3 1177.5727507576098 1177.57164993586 45.208 2 0.06996569594124714 0.0040433323161428135 0.9438714419765777 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 1687 9979 AEGPEVICA True H1975_Epitope_Rep3 887.4058686733099 887.40531496793 43.42 1 0.06995730142969596 0.0040433323161428135 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 122819 8332 VGVNGFGR True PC9_epitope_Rep1 804.4242360491198 804.42312993586 36.882 2 0.06995270716335523 0.0040433323161428135 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 636 8514 AATAVTQAL True NCI_RA007_Epitope_Rep5 844.4654321547599 844.46432993586 39.433 2 0.06993656807952325 0.0040433323161428135 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.N779H|1|0.37|ENSG00000137076|chr9:35717269-35717269|T/G|missense_variant'] 90598 4021 RKISGTTAL True NCI_RA007_Epitope_Rep4 945.5607295219299 945.55962993586 21.724 2 0.06993227642400296 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'CLIP1|p.E1185Gfs*24|1|0.23|ENSG00000130779|chr12:122309804-122309805|-/T|frameshift_variant', 'ENST00000541410.1_1_12:122839622-122839970:-|nuORF', 'ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2'] 114880 10004 TTDVDSLSY True H1975_Epitope_Rep1 999.43967089939 999.4390749679301 43.416 1 0.06993080479783367 0.0040433323161428135 0.9438714419765777 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000490583.5_1_22:20040979-20049207:+|nuORF', 'ENST00000485715.2_1_22:20024321-20049197:+|nuORF', 'ENST00000484373.5_1_22:20024321-20041279:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-3|TANGO2', 'nc|ENSG00000183597|Q6ICL3-4|TANGO2', 'nc|ENSG00000183597|Q6ICL3-6|TANGO2'] 132210 8132 VYKGEEATF True PC9_epitope_Rep2 1042.4971262058598 1042.4960299358602 36.637 2 0.06992282868796938 0.0040433323161428135 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 71159 4288 M[Oxidation]EVKPSSVTA True H1975_Epitope_Rep2 1063.52196143515 1063.5208699358602 21.607 2 0.06992209644302869 0.0040433323161428135 0.9438714419765777 ['BTG3|p.P193Afs*29|1|0.14|ENSG00000154640|chr21:17594276-17594277|-/T|frameshift_variant', 'ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 83691 10512 QEALSALTA True H1975_Epitope_Rep3 902.4709114580199 902.46980993586 45.498 2 0.06991886465210141 0.0040433323161428135 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 2261 12788 AEPDFIFRA True H1975_Epitope_Rep2 1064.52909504048 1064.5279899358602 54.294 2 0.06991361874504237 0.0040433323161428135 0.9438714419765777 ['ENSG00000166439|ENST00000299563|RNF169'] 112709 23274 TPGTLLLFL True PC9_epitope_Rep2 973.58481901145 973.58372993586 95.008 2 0.06990701799356187 0.0040433323161428135 0.9438714419765777 ['ENSG00000178031|ENST00000380548|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-2|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-1|ADAMTSL1'] 20781 18152 EQLSQLTGV True PC9_epitope_Rep5 973.5080252427299 973.50692993586 74.83 2 0.06990300695704338 0.0040433323161428135 0.9438714419765777 ['ENSG00000152684|ENST00000274311|PELO'] 699 11080 AAVGFPTHL True H1975_Epitope_Rep2 911.48650195251 911.48540993586 47.651 2 0.06990063801627619 0.0040433323161428135 0.9438714419765777 ['ENSG00000177352|ENST00000321895|CCDC71'] 6917 14282 AQLEAALQQA True PC9_epitope_Rep4 1041.54547338061 1041.54436993586 62.837 2 0.06988908389944887 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 78163 6326 PAPPPPPPP True H1975_Epitope_Rep1 865.46978925921 865.46868993586 29.397 2 0.06987969086737948 0.0040433323161428135 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 15102 5841 EADPGQYRC True PC9_epitope_Rep5 1037.42364399577 1037.4225499358602 27.46 2 0.06987851699641819 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 63461 11983 LPHDLAVQA True PC9_epitope_Rep5 962.5185303567799 962.51742993586 51.089 2 0.06987623140201357 0.0040433323161428135 0.9438714419765777 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'ENST00000487671.1_1_22:31840579-31845472:-|nuORF', 'nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1'] 136696 19451 YIGPVLVSV True PC9_epitope_Rep6 945.55351888317 945.55242993586 87.482 2 0.06987281727905256 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 1713 11351 AEGPVAVVV True H1975_Epitope_Rep2 839.4752685624699 839.47472496793 48.711 1 0.06987021042263274 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 84673 18970 QHFDAAYIF True PC9_epitope_Rep4 1110.5134449763398 1110.5123499358601 81.058 2 0.06986899849546317 0.0040433323161428135 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 69376 14522 LVQGELVTA True PC9_epitope_Rep3 928.5229470308799 928.52184993586 60.981 2 0.06985828383431673 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1'] 75898 5745 NRDRTQIAL True PC9_epitope_Rep2 1085.59415490853 1085.59304993586 27.489 2 0.06985581658223484 0.0040433323161428135 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 93769 9598 RTSTGIIGV True PC9_epitope_Rep4 902.5185303567799 902.51742993586 44.544 2 0.0698550498539426 0.0040433323161428135 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 113703 10713 TRDETNYGIP True PC9_epitope_Rep2 1164.5411162761598 1164.54000993586 46.524 2 0.06985093274130398 0.0040433323161428135 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 4718 16998 ALDSTNVEL True PC9_epitope_Rep5 960.47639076128 960.47584496793 70.401 1 0.06984504383477458 0.0040433323161428135 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 21173 9750 EREKWIHAL True PC9_epitope_Rep2 1180.63529144452 1180.6336349037902 42.842 3 0.06982545110999183 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 134859 15050 YAAELIERV True PC9_epitope_Rep4 1062.57095985246 1062.5698699358602 65.822 2 0.06982166230709726 0.0040433323161428135 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 102327 6729 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48104993586 30.906 2 0.06981673145360508 0.0040433323161428135 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 32756 9513 GIAGSLKTV True PC9_epitope_Rep2 844.5018176634801 844.50072993586 41.94 2 0.06981352875024921 0.0040433323161428135 0.9438714419765777 ['ENSG00000008083|ENST00000341776|JARID2'] 70844 4803 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 23.563 2 0.06981152049921557 0.0040433323161428135 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 39536 17258 HPFGFVAV True PC9_epitope_Rep4 872.4544735482399 872.45336993586 74.389 2 0.06980501240295417 0.0040433323161428135 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 136487 15246 YHILGNEM True PC9_epitope_Rep3 975.44840219163 975.44730993586 63.791 2 0.0697978421909408 0.0040433323161428135 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 88393 18070 QYPSICPRL True PC9_epitope_Rep5 1075.54845058607 1075.5473499358602 74.521 2 0.06979476338467365 0.0040433323161428135 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 22371 12865 ETERFRELLLY True H1975_Epitope_Rep1 1467.7721788401498 1467.7705349037901 54.554 3 0.06976970074005666 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 72504 13735 MVAPAVASV True PC9_epitope_Rep6 843.4524249429099 843.45132993586 64.622 2 0.06975594998085191 0.0040433323161428135 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 126811 7158 VPSSPLRAA True PC9_epitope_Rep2 896.50796567308 896.50686993586 32.926 2 0.0697526862963533 0.0040433323161428135 0.9438714419765777 ['ENST00000372409.7_1_20:44563346-44566100:+|nuORF'] 35239 5665 GSIDAITGK True NCI_RA007_Epitope_Rep3 860.46034677432 860.45924993586 29.268 2 0.06972355038035345 0.0040433323161428135 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 95386 10128 SAIGLADPP True NCI_RA007_Epitope_Rep4 839.4388830537499 839.43778993586 45.814 2 0.0697190052194549 0.0040433323161428135 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 132704 20721 VYSEVAAYEF True PC9_epitope_Rep1 1176.5339056373998 1176.5333749679298 84.528 1 0.06971317937560899 0.0040433323161428135 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 43871 4621 ILDERHDNY True H1975_Epitope_Rep3 1173.54145062933 1173.5398049037901 22.897 3 0.06970667714616109 0.0040433323161428135 0.9438714419765777 ['ENSG00000023287|ENST00000025008|RB1CC1', 'nc|ENSG00000023287|Q8TDY2-2|RB1CC1', 'ENST00000522957.1_1_8:53536344-53555381:-|nuORF'] 71920 7124 MPRQLSAAAA True PC9_epitope_Rep4 1014.5280494946599 1014.52694993586 34.675 2 0.06970665318034736 0.0040433323161428135 0.9438714419765777 ['ENSG00000078081|ENST00000265598|LAMP3'] 31375 13025 GEAPVPVLP True H1975_Epitope_Rep1 877.4909186266099 877.49037496793 55.184 1 0.06969758098448334 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 39936 9949 HQNQLLSSL True NCI_RA007_Epitope_Rep5 1038.5458077337798 1038.54470993586 44.91 2 0.06969127149745821 0.0040433323161428135 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 102666 10171 SQDNVIKVC True PC9_epitope_Rep5 1004.49608066004 1004.49498993586 44.109 2 0.06968534528865634 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 126143 14514 VPFAAPATA True PC9_epitope_Rep5 843.4490538146299 843.44850496793 60.827 1 0.06968000250331399 0.0040433323161428135 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 54663 8498 LADVNNIGKY True H1975_Epitope_Rep3 1105.57677350889 1105.57566993586 37.673 2 0.0696786408670622 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 14094 14299 DSDSDQLFY True H1975_Epitope_Rep2 1088.42983449168 1088.42872993586 60.151 2 0.06967717805821766 0.0040433323161428135 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 138484 14909 YRGQFPEL True PC9_epitope_Rep2 1008.5028802926398 1008.50178993586 62.611 2 0.06966964736583814 0.0040433323161428135 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 82 10633 AAAMTLRTV True PC9_epitope_Rep5 932.5113368013599 932.51022993586 45.888 2 0.0696669864617708 0.0040433323161428135 0.9438714419765777 ['PTGES3-UBE2K|1|fusion', 'nc|ENSG00000078140|P61086-2|UBE2K', 'ENSG00000078140|ENST00000261427|UBE2K', 'PTGES3-UBE2K|2|fusion', 'nc|ENSG00000078140|P61086-3|UBE2K'] 31820 9029 GEMWNNTAA True H1975_Epitope_Rep2 992.4021802752 992.40108993586 39.682 2 0.06966206440461134 0.0040433323161428135 0.9438714419765777 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000446155.1_1_1:45997278-45997635:+|nuORF', 'ENST00000507778.1_1_4:41844266-41844645:-|nuORF', 'nc|ENSG00000124097|B2RPK0|HMGB1P1'] 18484 4586 EKLQEEM[Oxidation]LQR True NCI_RA007_Epitope_Rep2 1318.6551008630197 1318.6540099358601 22.464 2 0.06965999910400048 0.0040433323161428135 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 126737 20304 VPSAVLIVA True PC9_epitope_Rep5 867.5429541994699 867.54184993586 83.144 2 0.06965037778955811 0.0040433323161428135 0.9438714419765777 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000294119.6_1_11:62444064-62444232:-|nuORF'] 66814 20536 LSVPGLVSV True PC9_epitope_Rep4 869.52221875489 869.52112993586 87.142 2 0.06964735889897956 0.0040433323161428135 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 26475 17717 FIPPDGNFRL True PC9_epitope_Rep6 1174.61349337078 1174.6123899358602 80.783 2 0.06962426263776006 0.00406762425320961 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 6140 19776 APNPVVFVA True PC9_epitope_Rep5 912.5069030439199 912.50580993586 81.113 2 0.06961116428337034 0.00406762425320961 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 23770 12808 EYISTVKTL True PC9_epitope_Rep2 1052.57537652656 1052.57426993586 54.567 2 0.0695948681759685 0.00406762425320961 0.9438714419765777 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 103635 19837 SRDLSLLI True PC9_epitope_Rep1 915.5389314481899 915.53782993586 81.119 2 0.06959255684358404 0.00406762425320961 0.9438714419765777 ['ENSG00000242550|ENST00000238508|SERPINB10'] 97045 11094 SEYEMSIAA True H1975_Epitope_Rep1 999.4219126602699 999.4213749679301 47.637 1 0.06958930947725393 0.00406762425320961 0.9438714419765777 ['nc|ENSG00000138138|Q8NBU5-2|ATAD1', 'ENSG00000138138|ENST00000680024|ATAD1'] 36557 14777 GVLDAILATK True NCI_RA007_Epitope_Rep5 999.59644632431 999.59534993586 63.513 2 0.06957974326728013 0.00406762425320961 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 86237 14912 QPYMPTVSA True PC9_epitope_Rep4 992.4637179025999 992.46262993586 65.3 2 0.06957257588081163 0.00406762425320961 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 106474 9128 SVVGPVKGV True PC9_epitope_Rep5 840.5069030439199 840.50580993586 40.057 2 0.06955608603159821 0.00406762425320961 0.9438714419765777 ['nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 85556 9840 QLLGSAHEV True PC9_epitope_Rep1 952.4977949122001 952.49668993586 42.711 2 0.06954483760482696 0.00406762425320961 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 106508 13107 SVVPDVRSV True PC9_epitope_Rep3 956.52909504048 956.52798993586 55.439 2 0.06953097973420176 0.00406762425320961 0.9438714419765777 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1'] 102951 12078 SQIPAQPSV True PC9_epitope_Rep3 925.48689587533 925.4863449679301 51.501 1 0.06953055614865813 0.00406762425320961 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 120597 11617 VGAGAPVYLAA True H1975_Epitope_Rep1 987.5389314481899 987.53838496793 49.674 1 0.06950243575749052 0.00407646537536397 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 26070 7672 FHDSAVTSV True PC9_epitope_Rep2 961.45051036661 961.44940993586 34.879 2 0.0695005976660414 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'ENSG00000182308|ENST00000333141|DCAF4L1'] 54483 8483 LAAARLAAA True PC9_epitope_Rep5 826.5024863698198 826.50138993586 37.571 2 0.0694959987901162 0.00407646537536397 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 63984 17819 LQAPELANV True PC9_epitope_Rep4 953.5181960036099 953.51708993586 76.573 2 0.06948989211155793 0.00407646537536397 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 135802 5139 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 24.844 2 0.06948888896550978 0.00407646537536397 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 15627 20862 EAVVDIIVLY True H1975_Epitope_Rep2 1132.6379767831197 1132.6368699358602 86.381 2 0.06947702785582216 0.00407646537536397 0.9438714419765777 ['ENST00000310389.5_1_5:175799850-175800087:+|nuORF'] 34587 19137 GQGEVLVYV True PC9_epitope_Rep4 962.5072969667398 962.50618993586 81.706 2 0.0694704801796814 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 71829 21636 MPALGWAVA True PC9_epitope_Rep5 914.4684093602199 914.46730993586 88.265 2 0.06945196590822127 0.00407646537536397 0.9438714419765777 ['AOC1|p.L708Wfs*7|1|0.34|ENSG00000002726|chr7:150861073-150861073|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 97544 20502 SGVEVLVSV True PC9_epitope_Rep1 887.4963979298699 887.4958449679301 83.673 1 0.06945156624374656 0.00407646537536397 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 84551 10836 QHAVGIVV True PC9_epitope_Rep3 821.47593726881 821.47484993586 46.652 2 0.06943753660212612 0.00407646537536397 0.9438714419765777 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 14793 12460 DYAEVSNTF True NCI_RA007_Epitope_Rep5 1044.44000525256 1044.43890993586 54.584 2 0.06943662605560312 0.00407646537536397 0.9438714419765777 ['ENSG00000186141|ENST00000334163|POLR3C'] 30172 23225 FYTFPFQQL True PC9_epitope_Rep5 1189.5807962601698 1189.5796899358602 94.318 2 0.0694354547390286 0.00407646537536397 0.9438714419765777 ['ENSG00000139372|ENST00000392872|TDG', 'ENST00000544060.1_1_12:104359692-104373925:+|nuORF'] 95650 12435 SAVPPGTSL True PC9_epitope_Rep3 827.43888305375 827.43778993586 52.856 2 0.06942213081453902 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 36055 16622 GVDVTLPRV True PC9_epitope_Rep2 954.5498304850599 954.54872993586 69.182 2 0.0694185648101905 0.00407646537536397 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 26752 20184 FLDGNEMTL True PC9_epitope_Rep4 1038.46919720586 1038.46808993586 85.775 2 0.06941199940046339 0.00407646537536397 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 85286 5528 QKSLSLSPG True NCI_RA007_Epitope_Rep5 915.5025459394699 915.50144993586 27.95 2 0.069409170406136 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 1080 4830 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.3913849679301 23.669 1 0.06940808847528543 0.00407646537536397 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 102477 7830 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 35.107 2 0.06940657762696302 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 132575 22508 VYPNWAIGL True PC9_epitope_Rep1 1031.5440168286298 1031.54347496793 91.378 1 0.06939864326435073 0.00407646537536397 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 47267 23815 IYEPNFIFF True PC9_epitope_Rep2 1188.5855472874398 1188.5849749679298 97.074 1 0.0693826024390646 0.00407646537536397 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 85829 15208 QMISRIEYV True PC9_epitope_Rep2 1137.58523001761 1137.5841299358601 63.76 2 0.06938220866411549 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 102335 6465 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48104993586 29.841 2 0.06938141787081231 0.00407646537536397 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 74429 12937 NIVPVIAKA True PC9_epitope_Rep2 923.5804023373499 923.57930993586 55.057 2 0.0693680093088278 0.00407646537536397 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 113021 15532 TPTPVPVV True PC9_epitope_Rep5 808.4694549060399 808.46834993586 64.756 2 0.06936304892966644 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 109798 10437 THITAQTAVL True PC9_epitope_Rep2 1053.58185888933 1053.5807699358602 45.465 2 0.06936291530666357 0.00407646537536397 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 6602 18776 APWPPKGLVPA True PC9_epitope_Rep3 1131.64406522307 1131.64296993586 77.442 2 0.06936123931255252 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 128895 9762 VSTEVDARL True PC9_epitope_Rep2 988.5189242795998 988.51782993586 42.888 2 0.06935662565837909 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 88959 3644 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 18.444 2 0.06935442925709137 0.00407646537536397 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 53567 6036 KVTEGSFVYK True NCI_RA007_Epitope_Rep1 1156.61282466444 1156.61172993586 27.519 2 0.06934240007383481 0.00407646537536397 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 110020 11921 THTTPVLL True PC9_epitope_Rep5 880.5018176634799 880.50072993586 50.851 2 0.06934082904548604 0.00407646537536397 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 7070 12535 AQVVQVVL True NCI_RA007_Epitope_Rep3 854.5225531080598 854.52200496793 56.54 1 0.06931946065140415 0.00407646537536397 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4'] 84901 13868 QHSITPLAL True PC9_epitope_Rep6 978.5498304850599 978.54872993586 65.167 2 0.06930977591830273 0.00407646537536397 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 99362 10733 SLDVGGPLRY True H1975_Epitope_Rep1 1075.56620882519 1075.5651099358602 46.246 2 0.06930686971100017 0.00407646537536397 0.9438714419765777 ['ENSG00000176894|ENST00000317479|PXMP2'] 94811 13648 RYLTVAAVF True NCI_RA007_Epitope_Rep1 1038.5862159937797 1038.5851099358601 57.1 2 0.06928720899431536 0.00407646537536397 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 106274 10084 SVQPTVSL True H1975_Epitope_Rep1 829.4545331178899 829.4539849679301 43.724 1 0.06928381924728123 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000434232.1_1_7:36858782-36858980:+|nuORF', 'ENST00000513394.1_1_8:57014234-57014760:-|nuORF', 'ENST00000423757.1_1_7:149031294-149031639:+|nuORF'] 76953 20988 NVPEGLLATV True PC9_epitope_Rep3 1011.56006081559 1011.55896993586 86.007 2 0.0692781226529827 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 14071 13261 DSDMQTLVY True H1975_Epitope_Rep1 1070.45902644498 1070.45847496793 56.107 1 0.06927204000455271 0.00407646537536397 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 21627 7112 ERSSYYKSL True PC9_epitope_Rep1 1131.55603806431 1131.55438490379 32.165 3 0.06926382652650678 0.00407646537536397 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 84620 4544 QHDPSAVAV True PC9_epitope_Rep6 922.4508447197799 922.44974993586 24.733 2 0.06925129998236747 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 25931 13939 FGPGVAFR True PC9_epitope_Rep1 849.4497225209699 849.44862993586 58.452 2 0.06925075845867137 0.00407646537536397 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 34429 6074 GPYGGAQPSA True PC9_epitope_Rep2 903.40864555463 903.40754993586 28.757 2 0.06922038445169343 0.00407646537536397 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 104051 6871 SRTPGQVL True PC9_epitope_Rep1 856.4766655447999 856.47556993586 31.234 2 0.06921538268366939 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.P626Lfs*11|1|0.21|ENSG00000120539|chr10:27170834-27170834|C/-|frameshift_variant'] 1693 5372 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 25.703 2 0.06921170706495666 0.00407646537536397 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 71880 9175 MPNGDHIVSA True PC9_epitope_Rep5 1039.47567956863 1039.4745899358602 40.238 2 0.0691975302696504 0.00407646537536397 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 74530 3800 NKYAASSY True NCI_RA007_Epitope_Rep4 902.4133965819001 902.41228993586 20.798 2 0.06919523772333397 0.00407646537536397 0.9438714419765777 ['HMCN1-IGLL5|1|fusion', 'nc|ENSG00000222037|P0CF74|IGLC6', 'nc|ENSG00000211685|A0M8Q6|IGLC7', 'nc|ENSG00000211679|P0DOY3|IGLC3', 'nc|ENSG00000211677|P0DOY2|IGLC2', 'nc|ENSG00000211675|P0CG04|IGLC1', 'nc|ENSG00000254709|B9A064|IGLL5', 'ENSG00000128322|ENST00000330377|IGLL1'] 113898 16140 TRIDLIQKL True PC9_epitope_Rep3 1098.67609362734 1098.6749899358601 67.231 2 0.06917584705218821 0.00407646537536397 0.9438714419765777 ['ENSG00000170677|ENST00000397942|SOCS6'] 138354 6224 YRDEFSHQV True PC9_epitope_Rep2 1179.53088594563 1179.52924490379 29.338 3 0.06917207824886147 0.00407646537536397 0.9438714419765777 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.H813Ifs*24|1|0.36|ENSG00000109111|chr17:28684908-28684908|C/-|frameshift_variant'] 5640 13769 APAGIPAVA True PC9_epitope_Rep2 765.43848913093 765.4379449679301 58.248 1 0.06917204593825049 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 31960 6744 GESPTTPPTP True H1975_Epitope_Rep2 982.46074069714 982.4596499358599 30.855 2 0.06916179754935406 0.00407646537536397 0.9438714419765777 ['ENSG00000173327|ENST00000309100|MAP3K11', 'nc|ENSG00000173327|Q16584-2|MAP3K11'] 56724 13341 LEAHFVPLV True H1975_Epitope_Rep3 1023.5753169569099 1023.57420993586 56.578 2 0.06915656198359497 0.00407646537536397 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF', 'PPP2R1A|p.D123N|1|0.1|ENSG00000105568|chr19:52211356-52211356|G/A|missense_variant'] 37779 10866 HAYIISSL True NCI_RA007_Epitope_Rep4 902.4861675993401 902.48506993586 48.646 2 0.06915295129742925 0.00407646537536397 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF', 'ENSG00000013016|ENST00000322054|EHD3', 'ENST00000498472.1_1_11:64622667-64627458:-|nuORF'] 1501 6312 AEEPASVTP True H1975_Epitope_Rep2 899.42362691243 899.42252993586 29.215 2 0.06915209174612387 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF'] 123128 11701 VHDESAFVV True PC9_epitope_Rep4 1001.4818104948898 1001.48070993586 52.77 2 0.06914779756954718 0.00407646537536397 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 89570 6969 RESDVGVVV True H1975_Epitope_Rep2 958.5083595958998 958.50726993586 31.727 2 0.06913129171604772 0.00407646537536397 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 36477 15351 GVISKTFQL True PC9_epitope_Rep6 991.57023157647 991.56912993586 71.18 2 0.06912723267332706 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 31427 4321 GEDLTRHHDEL True H1975_Epitope_Rep2 1320.6058417910401 1320.6041849037902 21.735 3 0.06911974481562426 0.00407646537536397 0.9438714419765777 ['ENSG00000142552|ENST00000270645|RCN3'] 38599 7985 HHIGDRSLSL True PC9_epitope_Rep2 1133.59415490853 1133.5924949037899 36.078 3 0.06911530881021549 0.00407646537536397 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF'] 98418 23348 SIIPPLFTV True PC9_epitope_Rep2 985.58481901145 985.58372993586 95.282 2 0.069114329773794 0.00407646537536397 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 45307 13508 ISARTTSII True PC9_epitope_Rep2 960.56039516876 960.55928993586 57.246 2 0.06911388680794407 0.00407646537536397 0.9438714419765777 ['ENSG00000215182|ENST00000621226|MUC5AC'] 101830 18459 SPILVATAV True PC9_epitope_Rep4 869.52221875489 869.52112993586 79.072 2 0.06910105500332206 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 29064 18296 FTPDVKVWEV True PC9_epitope_Rep6 1218.62847472858 1218.62736993586 83.018 2 0.06908493092054034 0.00407646537536397 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF'] 1517 9742 AEEPWGEEA True H1975_Epitope_Rep2 1016.4087051242799 1016.4081749679301 42.459 1 0.0690831001618823 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 70244 11325 LYMKNGQGF True PC9_epitope_Rep5 1056.5062514209196 1056.5051499358601 48.556 2 0.06908054673671826 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000127314|P61224-4|RAP1B', 'ENST00000494982.1_1_1:112233982-112249293:+|nuORF', 'nc|ENSG00000127314|P61224-3|RAP1B', 'nc|ENSG00000254893|A6NIZ1|RAP1BL', 'ENSG00000127314|ENST00000250559|RAP1B', 'ENSG00000116473|ENST00000369709|RAP1A'] 30011 19293 FYHKYFNYL True PC9_epitope_Rep1 1293.61824439805 1293.6171499358602 79.015 2 0.06907894978415613 0.00407646537536397 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 88015 6456 QVSPEAGVQKV True PC9_epitope_Rep4 1140.6138872935999 1140.61278993586 31.936 2 0.06907670170841941 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 107423 4569 SYTSHTNEI True NCI_RA007_Epitope_Rep3 1050.4618033263002 1050.4607099358602 24.854 2 0.06907598781289764 0.00407646537536397 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 72483 12364 M[Oxidation]VAPAVASV True PC9_epitope_Rep1 859.4473399429099 859.44624993586 52.417 2 0.06907262107188952 0.00407646537536397 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 97795 14128 SHIGDAVVI True PC9_epitope_Rep1 909.49198125577 909.49088993586 59.169 2 0.06906393938454854 0.00407646537536397 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 87964 12136 QVRDVIIAA True PC9_epitope_Rep3 983.5763795860698 983.57528993586 51.721 2 0.06906386751626763 0.00407646537536397 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 57947 11796 LEQNIQLPAA True H1975_Epitope_Rep3 1095.59242357303 1095.5913299358601 50.519 2 0.06905709759638387 0.00407646537536397 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 110106 9548 TIAPALVSK True PC9_epitope_Rep1 898.5487678559 898.54766993586 41.584 2 0.06902226343024276 0.00407646537536397 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 44209 5709 ILSGVVTK True NCI_RA007_Epitope_Rep5 815.51165407119 815.51054993586 28.647 2 0.06901833036960715 0.00407646537536397 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 41091 14206 HYLPDLHHL True PC9_epitope_Rep5 1143.5825275956702 1143.5808749037901 59.651 3 0.0690121861649328 0.00407646537536397 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 116395 10998 TWFNQPARKI True PC9_epitope_Rep4 1259.6774906096698 1259.67583490379 50.081 3 0.06901035882695043 0.00407646537536397 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 105013 3345 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 18.656 3 0.06900647858156306 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 132313 12149 VYLPNINKI True NCI_RA007_Epitope_Rep4 1072.62808080576 1072.6269899358601 53.728 2 0.06898568659840794 0.00407646537536397 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 17563 13150 EHIVPNAEL True PC9_epitope_Rep5 1020.52400966004 1020.52290993586 55.586 2 0.06898396009044526 0.00407646537536397 0.9438714419765777 ['ENSG00000120129|ENST00000239223|DUSP1'] 54096 15921 KYMDVQFDF True NCI_RA007_Epitope_Rep2 1191.52704643515 1191.5259499358601 66.646 2 0.06898044421974125 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 32051 5898 GEVPAPSAA True H1975_Epitope_Rep2 797.3919328613299 797.3913849679301 27.672 1 0.06893035367616214 0.00407646537536397 0.9438714419765777 ['ENSG00000119574|ENST00000594051|ZBTB45'] 31911 7562 GEQTLHYIA True H1975_Epitope_Rep2 1030.5083595958997 1030.5072699358602 34.04 2 0.06892652001791175 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 53195 7396 KTAENFRAL True PC9_epitope_Rep5 1048.5665431783598 1048.5654499358602 33.406 2 0.06892511911708937 0.00407646537536397 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000289549|F5H284|PPIAL4D', 'ENSG00000279782|ENST00000581138|PPIAL4F', 'ENSG00000271567|ENST00000581164|PPIAL4E', 'nc|ENSG00000108179|P30405-2|PPIF', 'ENSG00000236334|ENST00000419275|PPIAL4G', 'ENST00000492149.1_1_10:81107262-81109515:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID', 'nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C', 'ENSG00000270339|ENST00000584068|PPIAL4H', 'ENSG00000263353|ENST00000577856|PPIAL4A', 'ENSG00000108179|ENST00000225174|PPIF'] 70813 10931 MEENFAVEA True H1975_Epitope_Rep3 1038.4328116971399 1038.43170993586 47.132 2 0.06892435051289267 0.00407646537536397 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 110369 23639 TILPAIILV True PC9_epitope_Rep3 951.63685458431 951.63574993586 96.215 2 0.06886732692081553 0.00407646537536397 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 106012 19310 SVLNELPSA True PC9_epitope_Rep1 928.48656152216 928.48546993586 79.081 2 0.06886255504263995 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000167608|Q7Z404|TMC4', 'TMC4|p.V56Cfs*94|1|0.22|ENSG00000167608|chr19:54172015-54172015|C/-|frameshift_variant', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 37664 12898 HAGVISVL True PC9_epitope_Rep4 794.46503823194 794.46448496793 57.491 1 0.06885567181325035 0.00407646537536397 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 7475 8958 ASDRNIVLY True H1975_Epitope_Rep2 1049.5505587610498 1049.54997496793 39.412 1 0.06885214351969232 0.00407646537536397 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13'] 69947 21791 LYEEAFTVF True PC9_epitope_Rep4 1117.53317736141 1117.53208993586 92.013 2 0.06884829745775559 0.00407646537536397 0.9438714419765777 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 31879 5443 GEQEPPPPP True H1975_Epitope_Rep2 946.4396113297398 946.4390649679301 25.963 1 0.06884379238598812 0.00407646537536397 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3'] 108974 7840 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 35.106 1 0.06884176738379184 0.00407646537536397 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 2289 6738 AEPSRGPPLP True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 30.832 2 0.0688332101270706 0.00407646537536397 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 11756 19344 DHIGALLAV True PC9_epitope_Rep2 907.51271670035 907.51160993586 79.78 2 0.06883191347415128 0.00407646537536397 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3', 'ENST00000515601.6_1_5:465213-467010:+|nuORF'] 116187 13870 TVTNAVVTV True PC9_epitope_Rep1 902.50729696674 902.50618993586 58.191 2 0.06883101232229814 0.00407646537536397 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 57743 7342 LENPKKYIP True H1975_Epitope_Rep1 1100.62299542532 1100.62188993586 33.25 2 0.0688218342079479 0.00407646537536397 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS', 'CON__P62894'] 22972 17907 EVIKELAQI True PC9_epitope_Rep1 1041.6070110080097 1041.6059099358602 73.671 2 0.06881890812116492 0.00407646537536397 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27608458-27608728:-|nuORF'] 137953 22372 YPVDNEILL True PC9_epitope_Rep5 1074.55972646242 1074.5586299358602 91.065 2 0.06880844156356193 0.00407646537536397 0.9438714419765777 ['ENST00000429404.1_1_10:60897597-60897936:-|nuORF'] 4285 5436 AIITPPPAK True NCI_RA007_Epitope_Rep3 906.5538532363399 906.55274993586 28.392 2 0.06879430448768892 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 2225 7692 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.4390649679301 34.568 1 0.06879092947916424 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 116351 20114 TVYEGFISA True PC9_epitope_Rep1 985.4756624852898 985.47456993586 82.198 2 0.06878663883556158 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 1944 12234 AEIPEGYVP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 52.08 1 0.06877629553475045 0.00407646537536397 0.9438714419765777 ['ENST00000488002.5_1_3:179322588-179334847:+|nuORF', 'nc|ENSG00000136521|O43674-2|NDUFB5', 'ENST00000359944.10_1_3:179322640-179341825:+|nuORF', 'ENSG00000136521|ENST00000259037|NDUFB5'] 138546 13871 YRMDGHIQL True PC9_epitope_Rep3 1131.5495132152298 1131.54787490379 58.437 3 0.06877576875456277 0.00407646537536397 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 87322 18381 QTAEEFYTV True PC9_epitope_Rep1 1086.48695544498 1086.4858499358602 75.493 2 0.06877285183313336 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 103687 9292 SRDQSTPII True PC9_epitope_Rep3 1015.5298233164699 1015.52872993586 40.682 2 0.06876584237363793 0.00407646537536397 0.9438714419765777 ['ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 109802 8473 THIVGTEV True PC9_epitope_Rep3 854.4497820906199 854.44868993586 37.553 2 0.06876581565404186 0.00407646537536397 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 115621 22396 TVISILNTI True PC9_epitope_Rep2 972.58554728744 972.58444993586 91.641 2 0.06875771756650341 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 40043 6508 HQVPAVSSV True PC9_epitope_Rep4 922.4872302285 922.48612993586 32.154 2 0.06875521257477449 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 9862 16181 AYLSKAMEI True PC9_epitope_Rep5 1024.52631815916 1024.5252299358601 67.229 2 0.06874819264564747 0.00407646537536397 0.9438714419765777 ['ENSG00000124784|ENST00000379834|RIOK1'] 46888 8643 IVIETGPLK True NCI_RA007_Epitope_Rep3 968.5906326678798 968.58952993586 41.075 2 0.0687397635476461 0.00407646537536397 0.9438714419765777 ['ENSG00000151657|ENST00000379562|KIN'] 129187 17788 VTDGAFFDYM True H1975_Epitope_Rep2 1164.47976188956 1164.4786699358601 73.743 2 0.06873018241798477 0.00407646537536397 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 128387 8620 VSDSGISTDY True H1975_Epitope_Rep2 1042.44548455582 1042.44438993586 38.114 2 0.06872672372134432 0.00407646537536397 0.9438714419765777 ['ENSG00000187266|ENST00000222139|EPOR', 'ENST00000592375.6_1_19:11488662-11489328:-|nuORF'] 1060 9355 AEAIRILAA True NCI_RA007_Epitope_Rep3 926.5549158654999 926.55380993586 43.889 2 0.06870681583639185 0.00407646537536397 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 24401 20611 FAFPGSTNSL True PC9_epitope_Rep2 1039.49746055903 1039.49636993586 84.714 2 0.06869487639507225 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 103164 10979 SQNQVQVVL True NCI_RA007_Epitope_Rep4 1013.5505587610498 1013.54946993586 49.099 2 0.06868353978312962 0.00407646537536397 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1', 'nc|ENSG00000140688|Q96GQ5-2|RUSF1', 'ENST00000568491.1_1_16:31502158-31504599:-|nuORF'] 14070 10818 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep3 1086.45394144498 1086.45337496793 46.69 1 0.06868272905214448 0.00407646537536397 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 103948 18273 SRPPLVVF True PC9_epitope_Rep5 913.53853752537 913.53744993586 75.3 2 0.06865970624027226 0.00407646537536397 0.9438714419765777 ['TMEM248|p.R131Pfs*40|1|0.15|ENSG00000106609|chr7:66945204-66945205|-/C|frameshift_variant', 'nc|ENSG00000106609|Q9NWD8-2|TMEM248', 'ENSG00000106609|ENST00000341567|TMEM248'] 1140 7101 AEAPPSVAP True H1975_Epitope_Rep3 837.4232329896099 837.42212993586 32.284 2 0.06865656360057404 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 72263 19772 MSDLLSPLLY True H1975_Epitope_Rep2 1150.59439771898 1150.5933099358601 82.027 2 0.06864498731925812 0.00407646537536397 0.9438714419765777 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 96779 11149 SEQVPLMSA True H1975_Epitope_Rep3 960.4586325221599 960.45752993586 47.98 2 0.06864067959184755 0.00407646537536397 0.9438714419765777 ['ENST00000551200.5_1_12:102471044-102512308:-|nuORF', 'ENSG00000075188|ENST00000552283|NUP37'] 3998 6925 AHFQKSYTL True PC9_epitope_Rep2 1093.5556441414901 1093.5545499358602 32.038 2 0.06863689613561647 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000465023.1_1_22:37163271-37171742:-|nuORF', 'ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 6260 4340 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 23.127 2 0.0686318441751901 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ENSG00000184939|ENST00000563169|ZFP90'] 52717 15637 KQLDDLKVEL True PC9_epitope_Rep3 1199.6761531969898 1199.6750499358602 65.294 2 0.06861947494618656 0.00407646537536397 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 853 7310 ADIC[Carbamidomethyl]TLPDTEK True H1975_Epitope_Rep1 1261.58601814268 1261.5849299358601 33.125 2 0.06861739952672874 0.00407646537536397 0.9438714419765777 ['CON__P02769'] 135686 11604 YEIAEGISA True H1975_Epitope_Rep2 951.4549270407099 951.45382993586 49.701 2 0.06861569561163774 0.00407646537536397 0.9438714419765777 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000481911.5_1_6:36446898-36449467:+|nuORF'] 6929 5668 AQLGEDIR True PC9_epitope_Rep6 900.46649478392 900.46538993586 29.909 2 0.06861023358035476 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG', 'TFG|p.P25R|1|0.33|ENSG00000114354|chr3:100713759-100713759|C/G|missense_variant'] 140637 15413 YYPAKIEAI True PC9_epitope_Rep3 1066.5698972233 1066.5688099358601 64.44 2 0.0685958647436909 0.00407646537536397 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.V175Sfs*48|1|0.38|ENSG00000129292|chr8:132803834-132803834|G/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 49403 17903 KILEDVVGV True PC9_epitope_Rep1 970.5698972232999 970.56880993586 73.656 2 0.06858413707051336 0.00407646537536397 0.9438714419765777 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 1264 7976 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 35.626 1 0.06858293738048085 0.00407646537536397 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 27541 15133 FPHLQDAQV True PC9_epitope_Rep5 1053.5243440132099 1053.5232499358601 63.214 2 0.0685750748368806 0.00407646537536397 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61705957-61719950:-|nuORF'] 105293 16621 STTNGGILTV True PC9_epitope_Rep3 961.50802524273 961.50692993586 69.069 2 0.06855449634653302 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 11668 10700 DHDITSQL True PC9_epitope_Rep2 927.42977492203 927.42866993586 46.471 2 0.06854890684776477 0.00407646537536397 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 30438 10974 GAGAPVYL True H1975_Epitope_Rep2 746.3962899657799 746.39574496793 47.24 1 0.0685464369893644 0.00407646537536397 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 120394 14582 VFSGLVSTGLK True PC9_epitope_Rep6 1106.63356010902 1106.6324699358602 67.986 2 0.06853501679917573 0.00407646537536397 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 131509 5335 VVVDVSHED True NCI_RA007_Epitope_Rep3 997.47163973401 997.47054993586 27.993 2 0.06853428998918502 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 78200 8676 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 38.315 2 0.06851936696751344 0.00407646537536397 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 1418 7447 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40194496793 33.59 1 0.06851355406488728 0.00407646537536397 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 25466 15306 FENFVTIEA True H1975_Epitope_Rep2 1068.51277627 1068.51166993586 64.033 2 0.06850211069961631 0.00407646537536397 0.9438714419765777 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'RALGAPA1|p.C1295Lfs*2|1|0.4|ENSG00000174373|chr14:35655901-35655902|-/A|frameshift_variant', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1'] 75295 19508 NPTLILAA True PC9_epitope_Rep1 811.4803539429099 811.47924993586 79.856 2 0.06849123125700017 0.00407646537536397 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 72761 7262 NADPQAVTM True NCI_RA007_Epitope_Rep3 945.42258136661 945.42148993586 35.675 2 0.06848232242124233 0.00407646537536397 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 131078 13457 VVLVLAGR True PC9_epitope_Rep3 825.5436229058099 825.54252993586 56.808 2 0.06847788953335301 0.00407646537536397 0.9438714419765777 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 114066 15111 TRPPALLL True PC9_epitope_Rep4 879.5541875895099 879.55308993586 66.054 2 0.06847505976009871 0.00407646537536397 0.9438714419765777 ['ENSG00000090971|ENST00000205194|NAT14'] 28502 7686 FSGGFGAR True PC9_epitope_Rep1 797.3820368839699 797.38092993586 34.387 2 0.06846912614425169 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 20082 9107 ENGSLYDY True H1975_Epitope_Rep3 959.38724140371 959.3866949679301 40.018 1 0.06846892684975832 0.00407646537536397 0.9438714419765777 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 18334 21073 EIVTTIPTI True PC9_epitope_Rep5 985.56956287013 985.56901496793 86.118 1 0.06845844170702525 0.00407646537536397 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENSG00000004059|ENST00000000233|ARF5', 'ENST00000483848.5_1_3:57563094-57582900:-|nuORF', 'ENST00000493378.1_1_3:57569737-57582900:-|nuORF', 'ENST00000463733.5_1_7:127228552-127229672:+|nuORF', 'ENST00000470670.5_1_1:228270461-228285316:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 135879 4254 YESDVMGRGHA True NCI_RA007_Epitope_Rep4 1220.5244206662 1220.52277490379 22.69 3 0.06845787834390872 0.00407646537536397 0.9438714419765777 ['ENSG00000175899|ENST00000318602|A2M'] 96893 6745 SETEATPVP True NCI_RA007_Epitope_Rep4 929.4341915961298 929.43364496793 32.565 1 0.06845462770033728 0.00407646537536397 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 108401 7878 TEEAPIQATP True H1975_Epitope_Rep1 1055.51350454599 1055.5124099358602 35.253 2 0.06845425947710548 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'nc|ENSG00000185567|Q8IVF2-2|AHNAK2'] 83904 10091 QEISHLIEP True NCI_RA007_Epitope_Rep2 1064.55022440788 1064.54912993586 43.841 2 0.06844422004511908 0.00407646537536397 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 8603 18238 AVAGATSLVTL True PC9_epitope_Rep6 1001.57571087973 1001.5746099358599 82.794 2 0.06844303919461857 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF', 'ENSG00000227507|ENST00000429299|LTB'] 58227 14010 LESTPSPVVF True H1975_Epitope_Rep2 1074.55972646242 1074.55917496793 59.038 1 0.06841384074861166 0.00407646537536397 0.9438714419765777 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 35003 10100 GRAPGGLSL True PC9_epitope_Rep2 826.4661008611 826.4650099358599 44.185 2 0.06841364448607229 0.00407646537536397 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 135797 2747 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 14.601 2 0.0684129522142511 0.00407646537536397 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 20835 12271 EQPYKWEKF True PC9_epitope_Rep2 1253.6080736371698 1253.60641490379 52.51 3 0.06841057551662942 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000213096|O75437-2|ZNF254', 'ENSG00000213096|ENST00000357002|ZNF254'] 97691 10588 SHDSTSQLYTV True PC9_epitope_Rep2 1236.5622456435601 1236.5611499358602 46.043 2 0.06839850939677944 0.00407646537536397 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 96974 8759 SEVGKLLSA True H1975_Epitope_Rep2 902.50729696674 902.50618993586 38.655 2 0.06839761040183287 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF'] 4216 8001 AIDTIINQK True NCI_RA007_Epitope_Rep1 1014.5709598524599 1014.56986993586 35.116 2 0.0683749844236668 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF'] 138229 15137 YQTEIGQTL True PC9_epitope_Rep4 1051.51858992643 1051.51807496793 66.152 1 0.06837249125326054 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 70940 4089 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 20.818 2 0.06837125294224194 0.00407646537536397 0.9438714419765777 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 26756 19016 FLDGNEMTL True PC9_epitope_Rep6 1038.46919720586 1038.46867496793 85.789 1 0.0683637636260498 0.00407646537536397 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 118901 5003 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 24.329 2 0.06836271329341821 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 89265 4709 RELEDATETA True H1975_Epitope_Rep3 1133.52004647841 1133.51894993586 23.239 2 0.06836080638133002 0.00407646537536397 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 75434 8502 NQGESITHAL True PC9_epitope_Rep4 1068.51998690876 1068.5188899358602 40.18 2 0.06835568160669919 0.00407646537536397 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 21705 7524 ERYKEVAEL True PC9_epitope_Rep4 1135.5873381925899 1135.58624993586 36.307 2 0.06834954328274191 0.004100020247013565 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 4887 3884 ALGGEDVR True NCI_RA007_Epitope_Rep4 815.4137309350699 815.41262993586 21.154 2 0.06833660111511335 0.004100020247013565 0.9438714419765777 ['CON__P12763'] 132931 13129 VYTVVDEM[Oxidation]F True NCI_RA007_Epitope_Rep3 1117.50016336141 1117.49957496793 58.919 1 0.06832957105662908 0.004100020247013565 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 28721 15249 FSVTGRVL True PC9_epitope_Rep3 877.50215201665 877.50104993586 63.802 2 0.0683199851998298 0.004100020247013565 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 136397 8309 YHEGSAPAL True PC9_epitope_Rep3 943.4399456829099 943.43884993586 36.933 2 0.0683194305360246 0.004100020247013565 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000558338.1_1_15:62199375-62209725:-|nuORF'] 24556 20886 FALPGLLHA True PC9_epitope_Rep1 937.5385375253701 937.53798496793 85.157 1 0.06831773879581479 0.004100020247013565 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 6237 4893 APRGPGTVPA True PC9_epitope_Rep5 921.5032146458099 921.50210993586 23.861 2 0.068313998417489 0.004100020247013565 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 438 14612 AALQELLSK True PC9_epitope_Rep4 971.5651461960299 971.56404993586 64.136 2 0.06831260434546332 0.004100020247013565 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 17224 16079 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50652993586 66.836 2 0.06831225419151109 0.004100020247013565 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 118081 6992 VATVSLPR True H1975_Epitope_Rep3 841.5021520166499 841.50104993586 31.857 2 0.068311201858761 0.004100020247013565 0.9438714419765777 ['CON__P00761'] 95672 7558 SAVTSVAKV True PC9_epitope_Rep3 860.4967322830399 860.49562993586 34.073 2 0.06831028194675234 0.004100020247013565 0.9438714419765777 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27', 'IFI27|p.S8L|1|0.19|ENSG00000165949|chr14:94111705-94111705|C/T|missense_variant'] 100181 20713 SLLGGDVVSV True PC9_epitope_Rep2 944.51786165044 944.51731496793 85.108 1 0.06830990409130998 0.004100020247013565 0.9438714419765777 ['nc|ENSG00000157514|Q99576|TSC22D3'] 35164 10673 GSDDGVLAY True H1975_Epitope_Rep3 895.3923267841499 895.39177496793 46.127 1 0.06829862796371562 0.004100020247013565 0.9438714419765777 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 109722 11920 THGGLVTGL True PC9_epitope_Rep1 853.46576650793 853.46466993586 50.716 2 0.06828401338262503 0.004100020247013565 0.9438714419765777 ['ENSG00000119669|ENST00000238647|IRF2BPL'] 2588 10553 AESEITIAP True H1975_Epitope_Rep3 929.4705771048499 929.47002496793 45.659 1 0.06828230196692293 0.004100020247013565 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 8567 18320 AVAAVLTQV True PC9_epitope_Rep5 870.5174677276199 870.51636993586 75.482 2 0.06827263677281244 0.004100020247013565 0.9438714419765777 ['nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 12664 20160 DLENAFLNL True H1975_Epitope_Rep3 1047.52367530687 1047.52256993586 84.336 2 0.06826919263973831 0.004100020247013565 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 96676 7035 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.4183249679301 31.984 1 0.06824513778224942 0.0041244939271255065 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 2609 7797 AESLQPVAA True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 34.938 2 0.06824061570620371 0.0041244939271255065 0.9438714419765777 ['ENSG00000038219|ENST00000040738|BOD1L1'] 137488 21208 YLPPGFLSA True PC9_epitope_Rep1 963.50656869075 963.50546993586 86.408 2 0.06823920675092313 0.0041244939271255065 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 54004 7771 KYLEETNSL True NCI_RA007_Epitope_Rep4 1095.5448046742702 1095.54370993586 36.573 2 0.06820868182109541 0.0041244939271255065 0.9438714419765777 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 89653 9148 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 40.139 2 0.06819705703167145 0.0041244939271255065 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 108981 7833 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46908993586 35.108 2 0.06818860980918423 0.0041244939271255065 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 53825 9391 KYGALVNNF True NCI_RA007_Epitope_Rep3 1024.53418042092 1024.53308993586 44.03 2 0.06817712886416906 0.0041244939271255065 0.9438714419765777 ['ENST00000495427.1_2_1:46810505-46812688:+|nuORF', 'ENST00000475281.1_1_1:46810505-46810817:+|nuORF', 'nc|ENSG00000117481|Q96CB9-2|NSUN4', 'nc|ENSG00000117481|Q96CB9-4|NSUN4', 'ENSG00000117481|ENST00000474844|NSUN4'] 95567 5156 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 25.209 2 0.06817077164167014 0.0041244939271255065 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 7613 8067 ASITALEAK True PC9_epitope_Rep2 902.50729696674 902.50618993586 36.39 2 0.06816112786373399 0.004141100421685226 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 125461 9025 VLTVINQTQK True PC9_epitope_Rep5 1142.66592286646 1142.66482993586 39.66 2 0.06816101067648804 0.004141100421685226 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 1916 4665 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 23.04 2 0.06812839273541964 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 102842 11510 SQFSYQHAI True PC9_epitope_Rep2 1079.5036085686302 1079.5025099358602 49.597 2 0.0681277636198565 0.004141100421685226 0.9438714419765777 ['RAD21-EIF3H|4|fusion', 'RAD21-EIF3H|2|fusion', 'RAD21-EIF3H|1|fusion', 'RAD21-EIF3H|3|fusion', 'ENST00000517974.1_1_8:117671049-117768052:-|nuORF', 'ENSG00000147677|ENST00000521861|EIF3H', 'ENST00000518034.5_1_8:117671049-117768048:-|nuORF', 'EIF3H|p.E217Nfs*30|1|0.19|ENSG00000147677|chr8:116655914-116655914|C/-|frameshift_variant'] 88985 3021 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 16.025 2 0.06811605983033778 0.004141100421685226 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 89870 17442 RFMDGHITF True PC9_epitope_Rep1 1122.5280494946599 1122.52639490379 71.888 3 0.06810380541027018 0.004141100421685226 0.9438714419765777 ['ENSG00000078081|ENST00000265598|LAMP3'] 123407 8617 VIDPVAPRY True H1975_Epitope_Rep3 1028.5654805492 1028.5643899358602 38.139 2 0.068101661802125 0.004141100421685226 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 77099 14811 NYAFLHRTL True PC9_epitope_Rep3 1133.59817765981 1133.59654490379 62.105 3 0.06809235935748141 0.004141100421685226 0.9438714419765777 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 106015 18219 SVLNELPSA True PC9_epitope_Rep4 928.48656152216 928.48601496793 78.148 1 0.06807207862118785 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000167608|Q7Z404|TMC4', 'TMC4|p.V56Cfs*94|1|0.22|ENSG00000167608|chr19:54172015-54172015|C/-|frameshift_variant', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 87354 13707 QTDFGMYDY True H1975_Epitope_Rep2 1138.4277263166998 1138.42662993586 57.867 2 0.06806050948926197 0.004141100421685226 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'nc|ENSG00000183506|A4QPH2-2|PI4KAP2', 'nc|ENSG00000183506|A4QPH2-4|PI4KAP2', 'ENST00000467443.5_1_22:21831964-21846319:-|nuORF', 'ENST00000462560.6_1_22:21830876-21842641:-|nuORF', 'ENST00000450651.5_1_22:21830386-21841179:-|nuORF', 'ENST00000492581.5_1_22:21065434-21067334:-|nuORF', 'ENST00000463608.5_1_22:21830433-21838406:-|nuORF', 'ENST00000466772.5_1_22:21065465-21081626:-|nuORF', 'ENST00000486209.5_1_22:21830876-21832684:-|nuORF'] 11705 5370 DHFASVHSV True PC9_epitope_Rep6 997.46174375665 997.46064993586 28.52 2 0.06805039697944495 0.004141100421685226 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 126378 21721 VPLEFPVVA True PC9_epitope_Rep2 969.5535188831699 969.55242993586 89.028 2 0.06804850644199728 0.004141100421685226 0.9438714419765777 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 87830 21174 QVIQSLIAL True PC9_epitope_Rep4 983.6015317047498 983.60042993586 89.61 2 0.0680477513867528 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000185651|P68036-3|UBE2L3', 'nc|ENSG00000185651|P68036-2|UBE2L3', 'UBE2L3|p.Q116Sfs*10|1|0.33|ENSG00000185651|chr22:21621546-21621546|C/-|frameshift_variant', 'ENSG00000236444|ENST00000635918|UBE2L5', 'ENSG00000185651|ENST00000342192|UBE2L3', 'ENST00000496722.1_1_22:21922618-21975955:+|nuORF'] 1266 7900 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 35.361 2 0.06804172100461996 0.004141100421685226 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 4332 19612 AINDSFLSA True PC9_epitope_Rep3 936.45526139388 936.45416993586 80.674 2 0.06804103491636528 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 53601 18157 KVVNIVPVI True PC9_epitope_Rep4 979.6430025939098 979.64190993586 77.904 2 0.06803426420288765 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 108727 9317 TEMPGTLQA True H1975_Epitope_Rep3 946.4429824580199 946.44243496793 40.834 1 0.06802095186244751 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 96181 11739 SEEFPVPPA True H1975_Epitope_Rep1 971.4600124211498 971.4594649679301 50.146 1 0.06801632279297534 0.004141100421685226 0.9438714419765777 ['ENSG00000135900|ENST00000258383|MRPL44'] 72590 9472 MVRPVAVAA True PC9_epitope_Rep3 912.5215075622399 912.52040993586 41.385 2 0.06801619595866863 0.004141100421685226 0.9438714419765777 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 10186 9914 C[Carbamidomethyl]C[Carbamidomethyl]SGAIIVLTK True NCI_RA007_Epitope_Rep2 1220.62571548946 1220.62460993586 43.189 2 0.06801277403757641 0.004141100421685226 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF'] 11674 9498 DHDITSQL True PC9_epitope_Rep6 927.42977492203 927.42866993586 46.789 2 0.06800959938743367 0.004141100421685226 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 84736 12541 QHGGFVVTV True PC9_epitope_Rep4 942.4923156089399 942.49120993586 56.058 2 0.06798825663301225 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 108231 7998 TEAGFPEQA True H1975_Epitope_Rep2 948.4188758851598 948.41776993586 35.714 2 0.06798271793792258 0.004141100421685226 0.9438714419765777 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 24684 6651 FATHAAALSVR True PC9_epitope_Rep6 1142.6196413803798 1142.61799490379 34.32 3 0.06798099719335064 0.004141100421685226 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 108567 9524 TEHFLTAVA True H1975_Epitope_Rep2 987.5025459394699 987.50144993586 41.605 2 0.06797538387447888 0.004141100421685226 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L'] 136029 20959 YFQNTQGLIF True PC9_epitope_Rep4 1229.6080736371698 1229.6069699358602 88.78 2 0.06797080494331473 0.004141100421685226 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 37776 5077 HAYDREVHL True H1975_Epitope_Rep2 1138.55195574338 1138.5503249037902 24.61 3 0.06797073648626105 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000142330|Q9HC96-4|CAPN10', 'nc|ENSG00000142330|Q9HC96-2|CAPN10', 'ENSG00000142330|ENST00000391984|CAPN10', 'ENST00000483602.1_1_2:241534571-241535939:+|nuORF', 'ENST00000416591.5_1_2:241535566-241537362:+|nuORF'] 97821 12381 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.49088993586 55.43 2 0.06795248373262217 0.004141100421685226 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 52029 9831 KLFVGGLK True PC9_epitope_Rep5 860.5483739330798 860.54726993586 42.783 2 0.0679483466728766 0.004141100421685226 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 48962 13226 KEYPDFNFV True NCI_RA007_Epitope_Rep4 1157.53932537101 1157.53822993586 58.0 2 0.06794817504634697 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.K134Rfs*14|1|0.17|ENSG00000112531|chr6:163478888-163478888|A/-|frameshift_variant'] 30437 10882 GAGAPVYL True H1975_Epitope_Rep2 746.3962899657799 746.39574496793 46.886 1 0.0679399405715603 0.004141100421685226 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 62150 7390 LLPGELAK True H1975_Epitope_Rep3 839.5116540711899 839.51054993586 33.404 2 0.06793760900649509 0.004141100421685226 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 103345 17810 SQVEIKLSL True PC9_epitope_Rep4 1015.5913609438699 1015.59026993586 76.538 2 0.06792914614144674 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q1211H|1|0.08|ENSG00000177731|chr17:18245396-18245396|C/G|missense_variant'] 97206 18510 SFITSSWTF True NCI_RA007_Epitope_Rep4 1074.5022115863 1074.50110993586 80.113 2 0.06792275341222778 0.004141100421685226 0.9438714419765777 ['ENSG00000116209|ENST00000234831|TMEM59', 'TMEM59|p.I177Nfs*7|1|0.1|ENSG00000116209|chr1:54043386-54043387|-/T|frameshift_variant'] 118622 3654 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 19.007 2 0.06791485403172923 0.004141100421685226 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 132861 12921 VYTSGIYNI True NCI_RA007_Epitope_Rep4 1028.51786165044 1028.51727496793 56.791 1 0.0679129139146202 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1'] 74046 12046 NHSGAVVLL True PC9_epitope_Rep2 908.50796567308 908.50686993586 51.651 2 0.06789340588325474 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 106494 19107 SVVKVLTEL True PC9_epitope_Rep2 986.6011973515799 986.60010993586 78.866 2 0.06785829973537574 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 73941 12629 NHLGGGAVVL True PC9_epitope_Rep1 935.51886470995 935.51776993586 53.447 2 0.06783819800284531 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 34581 20146 GQGEVLVYV True PC9_epitope_Rep1 962.5072969667398 962.5067449679301 82.321 1 0.06782343400931576 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 97540 7557 SGTSEFLNK True PC9_epitope_Rep3 981.4767251144499 981.47562993586 34.069 2 0.06781459449263867 0.004141100421685226 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 114393 15241 TSDQATLLLY True H1975_Epitope_Rep2 1123.57610480255 1123.57557496793 63.782 1 0.06780741614504487 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM'] 35489 5919 GTFGGLGSK True NCI_RA007_Epitope_Rep4 822.42356734278 822.42301496793 29.389 1 0.06780598260982854 0.004141100421685226 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 27965 21188 FQSPPTPFL True PC9_epitope_Rep2 1032.5280324113198 1032.5269299358602 86.955 2 0.06779611182910354 0.004141100421685226 0.9438714419765777 ['ENST00000530791.5_1_11:65687869-65688903:+|nuORF', 'ENSG00000175550|ENST00000312515|DRAP1', 'nc|ENSG00000175550|Q14919-2|DRAP1'] 98502 20777 SILETVTAV True PC9_epitope_Rep5 931.52261267771 931.52150993586 84.971 2 0.06779499717813388 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 87404 12962 QTDQMVFNAY True H1975_Epitope_Rep1 1215.52302368387 1215.5224749679298 54.933 1 0.06778229282472788 0.004141100421685226 0.9438714419765777 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 8254 16902 ATINEVVQV True PC9_epitope_Rep4 971.52876068731 971.52766993586 72.998 2 0.06777348248967105 0.004141100421685226 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217', 'ZNF217|p.S275Ifs*4|1|0.32|ENSG00000171940|chr20:53582004-53582005|-/T|frameshift_variant'] 28701 17617 FSTTVIQNV True PC9_epitope_Rep4 1007.5287606873098 1007.52766993586 75.786 2 0.06777321270175898 0.004141100421685226 0.9438714419765777 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.T122Ifs*2|1|0.21|ENSG00000100554|chr14:67345856-67345859|CCAG/-|frameshift_variant'] 137502 21203 YLPPGFLSA True PC9_epitope_Rep5 963.50656869075 963.5060249679301 86.605 1 0.06775595286823739 0.004141100421685226 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 113721 9582 TRDETNYGIP True PC9_epitope_Rep6 1164.5411162761598 1164.54000993586 47.16 2 0.06773682032399657 0.004141100421685226 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 119255 15105 VELDNMPLR True PC9_epitope_Rep3 1085.5539298893298 1085.55282993586 63.24 2 0.06773491003576453 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 22395 15931 ETEVSFLDY True H1975_Epitope_Rep2 1101.4866210918099 1101.48552993586 66.478 2 0.06773247258569748 0.004141100421685226 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 17741 19628 EHTEVLQLL True PC9_epitope_Rep2 1080.5815245361598 1080.5804299358601 80.884 2 0.06773181652851373 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 75874 14701 NRDNVGLVL True PC9_epitope_Rep5 998.5508931142199 998.5503449679301 61.55 1 0.06772999713277705 0.004141100421685226 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 84550 9654 QHAVGIVV True PC9_epitope_Rep2 821.47593726881 821.47484993586 42.473 2 0.06772996066305688 0.004141100421685226 0.9438714419765777 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 101853 8113 SPKQILDPA True PC9_epitope_Rep2 967.5338460677499 967.53274993586 36.565 2 0.06771536166304334 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant'] 102457 17413 SPYHGFTIV True PC9_epitope_Rep5 1019.5076313199099 1019.50652993586 71.98 2 0.06770646889629399 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 113438 12964 TQNEVAAAL True PC9_epitope_Rep5 915.4661604307498 915.46506993586 54.875 2 0.06769617414243163 0.004141100421685226 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 116561 22145 TYFSTPLLL True PC9_epitope_Rep4 1053.57464825057 1053.5740749679298 93.398 1 0.06769302230917243 0.004141100421685226 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 53850 13001 KYGPVFSF True NCI_RA007_Epitope_Rep4 943.4803539429099 943.47924993586 57.11 2 0.06767140964138398 0.004141100421685226 0.9438714419765777 ['ENSG00000001630|ENST00000003100|CYP51A1'] 27018 20406 FLLPHPGLQV True PC9_epitope_Rep5 1119.6440652230701 1119.64296993586 83.529 2 0.06766954794603743 0.004141100421685226 0.9438714419765777 ['ENSG00000184743|ENST00000398868|ATL3'] 131863 19454 VYDPATETW True PC9_epitope_Rep3 1080.4763907612798 1080.47528993586 80.057 2 0.067667345200053 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 14061 10664 DSDM[Oxidation]QTLVY True H1975_Epitope_Rep1 1086.45394144498 1086.45337496793 45.977 1 0.0676482032886609 0.004141100421685226 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 9529 20728 AYAENIALL True PC9_epitope_Rep2 976.5229470308799 976.52239496793 85.168 1 0.06764396742389012 0.004141100421685226 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 34525 5390 GQEDHYNNL True PC9_epitope_Rep4 1088.45230127176 1088.45120993586 27.461 2 0.0676302598348566 0.004141100421685226 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 45207 15238 IRKPYIWEY True PC9_epitope_Rep2 1266.67609362734 1266.6744449037901 63.882 3 0.06760114497889493 0.004141100421685226 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 113017 15623 TPTPVPVV True PC9_epitope_Rep3 808.4694549060399 808.46890496793 65.241 1 0.06759109040569232 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 29574 17396 FVIRNIVEA True PC9_epitope_Rep2 1059.6076797143498 1059.60658993586 72.174 2 0.06758842219158508 0.004141100421685226 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 89045 9519 REEFPTLQA True H1975_Epitope_Rep1 1089.5454733806098 1089.54436993586 41.537 2 0.06758541490548424 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 93910 11673 RVIGTLEEV True PC9_epitope_Rep6 1014.57095985246 1014.56986993586 56.03 2 0.0675653678362615 0.004141100421685226 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 6262 4505 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 23.806 2 0.06756166041792984 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ENSG00000184939|ENST00000563169|ZFP90'] 136757 20000 YIPTELDQV True PC9_epitope_Rep1 1076.53899101784 1076.5378899358602 81.757 2 0.06754662099004385 0.004141100421685226 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 1159 12876 AEASMVIAV True H1975_Epitope_Rep3 889.45790424617 889.4573549679301 54.752 1 0.06754430547417584 0.004141100421685226 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF', 'ENST00000545930.5_1_11:61091835-61095006:-|nuORF'] 102974 6914 SQIQEFKEA True PC9_epitope_Rep6 1078.5294889632999 1078.52838993586 35.519 2 0.06754304863309926 0.004141100421685226 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 30090 23624 FYPAIADLF True PC9_epitope_Rep2 1055.5327834385898 1055.5316899358602 96.34 2 0.06753116104331372 0.004141100421685226 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 94814 12896 RYLTVAAVF True NCI_RA007_Epitope_Rep3 1038.5862159937797 1038.5851099358601 57.991 2 0.06751774391622462 0.004141100421685226 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 40010 6265 HQSSVGSVL True NCI_RA007_Epitope_Rep4 912.46649478392 912.46538993586 30.702 2 0.06751426868917151 0.004141100421685226 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 118500 12391 VDSLLENLEK True NCI_RA007_Epitope_Rep2 1158.61321858726 1158.6121299358601 52.804 2 0.06750669084832411 0.004141100421685226 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000553444.1_1_14:21679384-21680083:-|nuORF'] 106533 18235 SVVSPSSFENV True PC9_epitope_Rep4 1150.5506183307 1150.5495299358602 78.211 2 0.06750310630300006 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000289694|P60953-1|CDC42', 'ENSG00000070831|ENST00000656825|CDC42'] 102060 8681 SPPPPPPPP True PC9_epitope_Rep5 881.4647038787699 881.46360993586 38.333 2 0.06749458194608812 0.004141100421685226 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 103157 18581 SQNDGFFAV True PC9_epitope_Rep6 983.4348603024699 983.43431496793 84.113 1 0.06748774623187234 0.004141100421685226 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 115627 20540 TVISILNTI True PC9_epitope_Rep6 972.58554728744 972.58444993586 91.736 2 0.0674859586442656 0.004141100421685226 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 2239 11823 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.51128993586 50.553 2 0.06748070076170723 0.004141100421685226 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 120318 16608 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 69.019 2 0.06747295478585763 0.004166245833754166 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 135766 13964 YENELM[Oxidation]LMA True H1975_Epitope_Rep2 1128.48313339828 1128.48202993586 58.86 2 0.06744909863092177 0.004190860893713708 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 85549 19540 QLLDLDPEV True PC9_epitope_Rep6 1040.5389910178399 1040.5378899358602 87.825 2 0.06744442256187735 0.004190860893713708 0.9438714419765777 ['ENSG00000113384|ENST00000265070|GOLPH3'] 110011 11885 THTTPVLL True PC9_epitope_Rep1 880.5018176634799 880.50072993586 50.581 2 0.0674403119557871 0.004190860893713708 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 41281 20452 IAGPGFINV True PC9_epitope_Rep2 886.49125297978 886.49070496793 84.097 1 0.06742988854460058 0.004190860893713708 0.9438714419765777 ['nc|ENSG00000113643|P54136-2|RARS1', 'ENSG00000113643|ENST00000231572|RARS1', 'ENST00000521939.5_1_5:167913503-167921691:+|nuORF'] 78165 6570 PAPPPPPPP True H1975_Epitope_Rep2 865.46978925921 865.46868993586 30.182 2 0.06742553337957208 0.004190860893713708 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 48416 15452 KEDPFVFIP True H1975_Epitope_Rep2 1090.5698972233 1090.56937496793 64.592 1 0.0674241563315548 0.004190860893713708 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 26285 18518 FIDDANYSV True PC9_epitope_Rep5 1042.4607406971402 1042.46017496793 76.254 1 0.06740785656098283 0.004210367083501412 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 107239 8660 SYPRRFSTL True PC9_epitope_Rep2 1125.59309227937 1125.59143490379 38.676 3 0.06740103823506957 0.004210367083501412 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 34582 20148 GQGEVLVYV True PC9_epitope_Rep1 962.5072969667398 962.50618993586 82.328 2 0.06740059548221161 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 110100 7237 TIAPALVSK True NCI_RA007_Epitope_Rep1 898.5487678559 898.54766993586 32.141 2 0.0674004238027864 0.004210367083501412 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 27683 12466 FQDEVAKAQQL True PC9_epitope_Rep3 1275.64591569787 1275.6448099358602 52.974 2 0.06739973260196148 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 109934 13012 THSDAFRVSL True PC9_epitope_Rep5 1131.56727145435 1131.56563490379 55.058 3 0.06739768566462354 0.004210367083501412 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 72510 23271 MVDDVFYIV True PC9_epitope_Rep1 1099.52598380599 1099.52488993586 94.297 2 0.0673864699638637 0.004210367083501412 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000526700.5_1_16:70530266-70542451:-|nuORF'] 39747 19295 HPYLFPVAA True PC9_epitope_Rep1 1013.5334521449298 1013.53234993586 79.023 2 0.0673658511841794 0.004210367083501412 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 136462 5548 YHGNTNPEL True PC9_epitope_Rep2 1043.46722305991 1043.4661299358602 26.731 2 0.06735867077391815 0.004210367083501412 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 109548 6082 THAPATLEA True PC9_epitope_Rep3 909.45559574705 909.45448993586 28.444 2 0.06735417501940157 0.004210367083501412 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 40613 11236 HTDVGLLEY True H1975_Epitope_Rep3 1045.50802524273 1045.50747496793 48.321 1 0.06735303401554897 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'ENST00000542565.1_1_12:124970985-124979836:-|nuORF'] 96436 10512 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 45.454 1 0.06728290510651994 0.004210367083501412 0.9438714419765777 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 91831 13762 RPNDIMAEV True PC9_epitope_Rep3 1043.50697969691 1043.50588993586 58.018 2 0.06728274115099657 0.004210367083501412 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 15151 12187 EAEPHPLWEY True H1975_Epitope_Rep3 1269.56660274801 1269.56550993586 52.049 2 0.06727740468771584 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 32847 6840 GIHETTFNS True PC9_epitope_Rep5 1004.4563240230401 1004.45522993586 31.281 2 0.06727279636749275 0.004210367083501412 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000437653.1_1_3:175695464-175695797:-|nuORF', 'ENST00000418351.1_1_15:44281261-44281585:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 30938 7901 GASKAVFL True H1975_Epitope_Rep2 791.45413919507 791.45304993586 35.338 2 0.06726441923167481 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000109046|Q9Y6I7-2|WSB1', 'ENSG00000109046|ENST00000262394|WSB1'] 88991 3431 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 18.049 2 0.06725839210576642 0.004210367083501412 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 46114 8221 ITADVNHNL True PC9_epitope_Rep2 995.50360856863 995.50250993586 36.98 2 0.06725525505916578 0.004210367083501412 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1'] 102117 7974 SPQQPGLSA True PC9_epitope_Rep1 883.4399456829099 883.43884993586 35.495 2 0.06725025987307448 0.004210367083501412 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 91830 12969 RPNDIMAEV True PC9_epitope_Rep2 1043.50697969691 1043.50647496793 55.177 1 0.0672387070957305 0.004210367083501412 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 35675 5058 GTNPGIITK True NCI_RA007_Epitope_Rep2 899.50763131991 899.50652993586 24.3 2 0.06723063388801324 0.004210367083501412 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 11672 10226 DHDITSQL True PC9_epitope_Rep4 927.42977492203 927.42866993586 47.012 2 0.06723054328864783 0.004210367083501412 0.9438714419765777 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 115213 8795 TVAVPLVGK True NCI_RA007_Epitope_Rep4 882.5538532363399 882.55274993586 40.642 2 0.0672227040867722 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 96965 10305 SEVEVIHVP True NCI_RA007_Epitope_Rep5 1007.52876068731 1007.52766993586 46.269 2 0.06722213915413494 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 107049 15785 SYLPLAHMF True NCI_RA007_Epitope_Rep4 1077.53173789277 1077.53064993586 68.557 2 0.0672207131591031 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 102023 7481 SPPIPLAK True NCI_RA007_Epitope_Rep2 821.50108938749 821.49998993586 33.727 2 0.06719986090818406 0.004210367083501412 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 107503 9107 TAAPLSRIP True H1975_Epitope_Rep2 924.53926580136 924.53816993586 39.982 2 0.06717975390227693 0.004210367083501412 0.9438714419765777 ['ENST00000575214.1_1_16:3073840-3074149:-|nuORF'] 8832 10773 AVFPSIVGR True H1975_Epitope_Rep1 944.5443511817999 944.54324993586 46.4 2 0.06717322656836976 0.004210367083501412 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 95403 10545 SAIQSISHV True PC9_epitope_Rep5 940.4977949122 940.49668993586 45.55 2 0.06716058115729161 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 17215 14416 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 63.359 2 0.06714021726800624 0.004210367083501412 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 62259 15302 LLQESLAQA True PC9_epitope_Rep5 971.52876068731 971.52766993586 63.869 2 0.06713389206275537 0.004210367083501412 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 69335 22322 LVPSDFLSV True PC9_epitope_Rep2 975.52769805815 975.52660993586 91.344 2 0.06712876123383403 0.004210367083501412 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 36296 6152 GVGPVPARA True PC9_epitope_Rep1 822.47118624154 822.47008993586 28.478 2 0.06712634597517549 0.004210367083501412 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 6764 9621 AQEPGNYEV True PC9_epitope_Rep4 1005.4403396057298 1005.43924993586 44.631 2 0.067112869880707 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 24706 20327 FAVFQTTFF True H1975_Epitope_Rep2 1106.54368247546 1106.5425899358602 84.233 2 0.06711061652634913 0.004210367083501412 0.9438714419765777 ['ENSG00000145623|ENST00000274276|OSMR', 'nc|ENSG00000145623|Q99650-2|OSMR'] 123087 18188 VHAPPMQLGF True PC9_epitope_Rep2 1095.5535359665098 1095.5524299358601 75.268 2 0.06709040012760525 0.004210367083501412 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 26054 15806 FHDMGGVQL True PC9_epitope_Rep5 1002.4593012284997 1002.4582099358599 65.787 2 0.06708505555220257 0.004210367083501412 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'ENST00000497023.1_1_2:32727936-32730277:+|nuORF'] 107075 17617 SYLTSASSL True PC9_epitope_Rep1 927.45492704071 927.45382993586 72.556 2 0.06708334004972087 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 20992 8003 ERANGMEL True PC9_epitope_Rep5 918.4229157197799 918.42180993586 35.722 2 0.06707265078906614 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'nc|ENSG00000164548|Q13595-2|TRA2A', 'ENST00000494255.5_1_7:23547037-23556014:-|nuORF'] 24345 8258 FADQEVRSL True H1975_Epitope_Rep1 1063.52982331647 1063.5287299358602 36.703 2 0.06707097975336891 0.004210367083501412 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 31370 5417 GEAPPSAPP True H1975_Epitope_Rep3 821.3919328613299 821.39082993586 25.898 2 0.06705274001542232 0.004210367083501412 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 74984 23350 NLVSFLETV True PC9_epitope_Rep2 1020.54916177872 1020.54806993586 95.29 2 0.06705118701393907 0.004210367083501412 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 100580 13564 SLQEALVV True H1975_Epitope_Rep2 857.4858332461698 857.48528496793 57.311 1 0.06704473064132986 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000096996|P42701-2|IL12RB1', 'ENSG00000096996|ENST00000593993|IL12RB1'] 46120 22539 ITAFDLTDV True PC9_epitope_Rep5 993.5018772331299 993.50132496793 91.702 1 0.0670426158718612 0.004210367083501412 0.9438714419765777 ['ENSG00000100228|ENST00000263116|RAB36', 'nc|ENSG00000100228|O95755-2|RAB36'] 31583 10214 GEFSITYKP True NCI_RA007_Epitope_Rep4 1040.5178616504397 1040.51727496793 46.144 1 0.06703020851712001 0.004210367083501412 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 108514 11882 TEFPGVVA True H1975_Epitope_Rep3 818.4174193331799 818.4168749679301 50.854 1 0.06703006269381538 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 296 9857 AAHLLNDAL True NCI_RA007_Epitope_Rep1 936.50288029264 936.50178993586 42.344 2 0.06701551404948716 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4', 'nc|ENSG00000137171|Q9NSK0-4|KLC4', 'ENST00000467906.5_1_6:43030654-43039600:+|nuORF', 'nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2'] 108284 4320 TEAVPRAPA True H1975_Epitope_Rep3 910.4872302284998 910.48612993586 21.733 2 0.0670119712636934 0.004210367083501412 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 95140 12446 SAAAALVL True H1975_Epitope_Rep2 714.4275900940601 714.4270449679301 52.961 1 0.06700044613137036 0.004210367083501412 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 1195 5886 AEDDRHYNIP True H1975_Epitope_Rep2 1228.54726428576 1228.54616993586 27.627 2 0.06698913925825285 0.004210367083501412 0.9438714419765777 ['ENSG00000154124|ENST00000284274|OTULIN'] 22630 11658 ETQSIIFLGK True H1975_Epitope_Rep3 1134.6284747285797 1134.62736993586 49.977 2 0.06698405297020267 0.004210367083501412 0.9438714419765777 ['CON__REFSEQ:XP_001252647', 'CON__ENSEMBL:ENSBTAP00000038329'] 125670 15993 VMSATFAKF True PC9_epitope_Rep2 1000.5051887917599 1000.50408993586 66.77 2 0.06697476035947475 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF'] 2846 7972 AEVTSTLEA True H1975_Epitope_Rep1 919.44984166027 919.4492949679301 35.614 1 0.06695956220267162 0.004210367083501412 0.9438714419765777 ['ENSG00000119285|ENST00000366582|HEATR1'] 15146 12440 EAEPHPLWEY True H1975_Epitope_Rep1 1269.56660274801 1269.56550993586 52.888 2 0.0669521179018345 0.004210367083501412 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 135981 16467 YFEGIKQTF True PC9_epitope_Rep4 1131.5600608155898 1131.5589699358602 71.309 2 0.06693395824025655 0.0042231215907091325 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 74101 15424 NHVPVITTL True PC9_epitope_Rep5 992.5654805492001 992.56438993586 64.337 2 0.06692456467377332 0.0042231215907091325 0.9438714419765777 ['ENST00000609454.5_1_22:38228707-38236239:-|nuORF', 'ENST00000498417.5_1_22:38228707-38229954:-|nuORF', 'ENSG00000100124|ENST00000215941|ANKRD54'] 76344 12214 NSELSCQLY True H1975_Epitope_Rep3 1055.4593607981499 1055.45877496793 52.154 1 0.06692151128381703 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 66986 21371 LTAEDLFEA True PC9_epitope_Rep2 1007.4811417885498 1007.48057496793 87.673 1 0.06692136185959678 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 14073 13483 DSDMQTLVY True H1975_Epitope_Rep1 1070.45902644498 1070.45847496793 56.981 1 0.06692115265255424 0.0042231215907091325 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 95141 7005 SAAAALVLK True NCI_RA007_Epitope_Rep3 842.52255310806 842.52144993586 34.663 2 0.0669172291090819 0.0042231215907091325 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 7612 7977 ASITALEAK True PC9_epitope_Rep2 902.50729696674 902.50618993586 36.046 2 0.06691641103490259 0.0042231215907091325 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 127595 11732 VQYNEPLKV True PC9_epitope_Rep4 1088.5866099165999 1088.58550993586 52.889 2 0.06691556281687755 0.0042231215907091325 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 1285 7329 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 33.131 1 0.06691545980506253 0.0042231215907091325 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 47425 13896 IYIKQIKTF True PC9_epitope_Rep1 1152.6906810623198 1152.6890249037901 58.288 3 0.0669099095528498 0.0042231215907091325 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 13962 11775 DRMVGQVL True PC9_epitope_Rep4 916.4800366730798 916.47892993586 53.06 2 0.06690952610029655 0.0042231215907091325 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'EIF2S3|p.G359A|1|0.39|ENSG00000130741|chrX:24071621-24071621|G/C|missense_variant'] 115750 18695 TVLNVEGDAL True PC9_epitope_Rep4 1029.5342399905699 1029.5331499358601 79.99 2 0.06689362914237762 0.0042231215907091325 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5'] 40027 4458 HQVEQTEL True NCI_RA007_Epitope_Rep5 982.4719740871799 982.47086993586 23.792 2 0.06688510566804856 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 135632 7246 YEERVQAVV True H1975_Epitope_Rep1 1091.56112344475 1091.56002993586 32.881 2 0.0668837837967551 0.0042231215907091325 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 13960 13230 DRMVGQVL True PC9_epitope_Rep1 916.4800366730798 916.47892993586 55.755 2 0.06687459786777264 0.0042231215907091325 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'EIF2S3|p.G359A|1|0.39|ENSG00000130741|chrX:24071621-24071621|G/C|missense_variant'] 24224 7142 EYVRNQQTI True PC9_epitope_Rep3 1149.57783613805 1149.5767299358602 32.485 2 0.06686083954121981 0.0042231215907091325 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 67146 13547 LTDEGLLY True H1975_Epitope_Rep2 922.46476344842 922.46421496793 57.245 1 0.06685324790866777 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000136144|Q8NDN9-2|RCBTB1', 'ENSG00000136144|ENST00000378302|RCBTB1'] 60130 14651 LHVPGPMAV True PC9_epitope_Rep4 919.49495846123 919.49386993586 64.287 2 0.06685181757875912 0.0042231215907091325 0.9438714419765777 ['ENSG00000102243|ENST00000370634|VGLL1'] 17609 14454 EHMATIEAL True PC9_epitope_Rep5 1013.4851816231699 1013.48408993586 60.598 2 0.06684609571839975 0.0042231215907091325 0.9438714419765777 ['ENSG00000095906|ENST00000262302|NUBP2'] 84601 4620 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 23.138 2 0.06684112372908764 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 31210 18728 GDLENAFLNL True H1975_Epitope_Rep1 1104.54513902744 1104.5440499358601 78.095 2 0.06683929119674623 0.0042231215907091325 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 88970 3286 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 17.277 2 0.06682482195062199 0.0042231215907091325 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 70577 17364 LYYDAIWHF True NCI_RA007_Epitope_Rep4 1226.5760452328998 1226.57494993586 75.2 2 0.06682296809921724 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000165272|Q92482-2|AQP3', 'ENSG00000165272|ENST00000297991|AQP3'] 106077 17245 SVLVSVSEV True PC9_epitope_Rep6 917.50696261357 917.50641496793 78.93 1 0.06679770839652228 0.0042231215907091325 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 102493 7318 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 35.477 2 0.06678544898639382 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 11921 11758 DHSGQVTIL True PC9_epitope_Rep4 968.49270953176 968.49160993586 52.991 2 0.06676735921743818 0.0042231215907091325 0.9438714419765777 ['ENSG00000139668|ENST00000298125|WDFY2'] 622 17465 AASTLVTWL True H1975_Epitope_Rep1 960.52803241132 960.52748496793 72.665 1 0.06676722451825734 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 48795 2740 KEQVPPPAV True H1975_Epitope_Rep2 963.5389314481897 963.53782993586 14.59 2 0.06675800092456453 0.0042231215907091325 0.9438714419765777 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000478980.1_1_2:27256012-27257182:+|nuORF', 'ENST00000495312.1_1_2:27255799-27258254:+|nuORF'] 116197 13989 TVTNAVVTV True PC9_epitope_Rep5 902.50729696674 902.50618993586 58.83 2 0.06675405327480202 0.0042231215907091325 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 38188 3289 HESGHAIIA True H1975_Epitope_Rep2 933.4668291370899 933.4657299358599 17.291 2 0.06674524332598815 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 117834 4300 VAPAPAVVK True NCI_RA007_Epitope_Rep5 850.5276384885 850.52654993586 23.127 2 0.0667437787798656 0.0042231215907091325 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF'] 49371 17971 KIIDETMAQL True PC9_epitope_Rep5 1160.61111041228 1160.61000993586 74.142 2 0.06673921343336398 0.0042231215907091325 0.9438714419765777 ['ENSG00000072501|ENST00000322213|SMC1A'] 126390 21353 VPLGNLIVV True PC9_epitope_Rep4 922.5851533646199 922.58404993586 90.302 2 0.06672928774940194 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32875160-32883832:+|nuORF'] 127624 15325 VRDGATLIL True PC9_epitope_Rep5 956.5654805492 956.56438993586 63.958 2 0.06670021297508341 0.0042231215907091325 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 109760 7638 THILTPQKL True PC9_epitope_Rep4 1049.62332977849 1049.62222993586 36.761 2 0.06669333439408168 0.0042231215907091325 0.9438714419765777 ['ENSG00000136854|ENST00000373299|STXBP1'] 7032 13429 AQSGTIMAV True PC9_epitope_Rep2 876.43750315476 876.43640993586 56.937 2 0.0666904622258244 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3'] 88374 6337 QYNPHVHQL True PC9_epitope_Rep5 1134.55704112382 1134.55594993586 29.35 2 0.06668340046184702 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 89805 6043 RFEELGVK True NCI_RA007_Epitope_Rep4 976.5341804209197 976.53308993586 29.861 2 0.0666831010051513 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000124767|Q04760-2|GLO1', 'ENSG00000124767|ENST00000373365|GLO1'] 36574 23538 GVLENIFGV True PC9_epitope_Rep5 946.5123823471798 946.51128993586 95.523 2 0.0666679466821985 0.0042231215907091325 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 88513 9547 RADDTFEAL True NCI_RA007_Epitope_Rep4 1036.48253877088 1036.48197496793 43.571 1 0.06666779870847271 0.0042231215907091325 0.9438714419765777 ['ENSG00000103363|ENST00000409906|ELOB', 'nc|ENSG00000103363|Q15370-2|ELOB'] 102337 6703 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48104993586 30.754 2 0.06664072102832351 0.0042231215907091325 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 66983 21637 LTAEDLFEA True PC9_epitope_Rep1 1007.4811417885498 1007.48057496793 88.053 1 0.06663322786010077 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 54626 17513 LADLSCLVY True H1975_Epitope_Rep2 995.4997690581499 995.4992249679301 72.662 1 0.06661883846987811 0.0042231215907091325 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'DCAF5-ERH|1|fusion', 'ENST00000523006.1_1_7:139219111-139219246:+|nuORF'] 25462 7819 FENEMATAA True NCI_RA007_Epitope_Rep3 982.4065969492999 982.40548993586 37.873 2 0.06660397175652119 0.0042231215907091325 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ACTG2|p.S234Y|2|0.25|ENSG00000163017|chr2:73914767-73914767|C/A|missense_variant', 'nc|ENSG00000163017|P63267-2|ACTG2'] 115687 13886 TVLDKTLSV True PC9_epitope_Rep4 974.5648118428601 974.56370993586 61.314 2 0.06660015960921303 0.0042231215907091325 0.9438714419765777 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF', 'ENST00000432615.5_1_7:158447451-158457424:-|nuORF'] 46873 13788 IVGPVVGL True H1975_Epitope_Rep3 752.4796256669199 752.47907496793 58.338 1 0.06659885508342671 0.0042231215907091325 0.9438714419765777 ['ENSG00000152348|ENST00000282185|ATG10'] 70769 12730 MEDSPDLLAA True H1975_Epitope_Rep3 1060.47467650912 1060.47417496793 54.177 1 0.06658769861029537 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000462436.1_1_7:97484616-97487685:-|nuORF'] 41990 5744 IEDINDHTP True H1975_Epitope_Rep3 1052.4774533904401 1052.47634993586 27.12 2 0.06657872673188049 0.0042231215907091325 0.9438714419765777 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB4|p.A557Gfs*30|1|0.19|ENSG00000253953|chr5:141389554-141389554|C/-|frameshift_variant', 'PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 85975 7080 QPFPAHIGRSA True PC9_epitope_Rep4 1179.61489035311 1179.61324490379 34.5 3 0.06657859692605532 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000139436|Q14161-3|GIT2', 'ENSG00000139436|ENST00000355312|GIT2', 'nc|ENSG00000139436|Q14161-4|GIT2'] 73828 11988 NHDVQVIL True PC9_epitope_Rep4 936.50288029264 936.50178993586 53.904 2 0.0665697517628075 0.0042231215907091325 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 46791 19937 IVDGMGITGV True PC9_epitope_Rep3 960.4950180308799 960.49392993586 81.93 2 0.06656429504741408 0.0042231215907091325 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525178.5_1_11:108217294-108236232:+|nuORF', 'ATM|p.D2913H|1|0.3|ENSG00000149311|chr11:108353831-108353831|G/C|missense_variant'] 95379 9999 SAIGLADPP True H1975_Epitope_Rep2 839.4388830537499 839.43778993586 43.451 2 0.0665590518188345 0.0042231215907091325 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 78896 23011 PEVLLYFLG True PC9_epitope_Rep5 1049.57973363101 1049.57917496793 93.502 1 0.066558411518802 0.0042231215907091325 0.9438714419765777 ['ENST00000605778.1_1_7:35735152-35735278:+|nuORF'] 108944 5335 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.4390649679301 25.575 1 0.06654679845158601 0.0042231215907091325 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 31941 7688 GESAEVLSA True H1975_Epitope_Rep2 861.40797684829 861.4074249679301 34.524 1 0.06654216833983236 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 133510 19946 WHDSDWIL True PC9_epitope_Rep4 1070.48214484806 1070.48104993586 84.857 2 0.06654058929492347 0.0042231215907091325 0.9438714419765777 ['ENSG00000107625|ENST00000373585|DDX50'] 26796 11883 FLDTNETPY True H1975_Epitope_Rep3 1098.48695544498 1098.4858499358602 50.858 2 0.06653979188292766 0.0042231215907091325 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 97835 13966 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 58.743 2 0.06653621556211456 0.0042231215907091325 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 112301 10313 TMDELVEHY True H1975_Epitope_Rep2 1135.48557554599 1135.48446993586 44.675 2 0.06653386877752408 0.0042231215907091325 0.9438714419765777 ['ENSG00000071051|ENST00000233154|NCK2'] 9792 8412 AYLHTTTTF True NCI_RA007_Epitope_Rep3 1053.51311062317 1053.51200993586 40.179 2 0.06653227633483187 0.0042231215907091325 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 102724 15566 SQDVTTVTL True PC9_epitope_Rep2 962.4920408254201 962.4914949679301 65.148 1 0.06653142458263425 0.0042231215907091325 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 118621 3578 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 18.663 2 0.06652885846732065 0.0042231215907091325 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 89046 9557 REEFPTLQA True H1975_Epitope_Rep1 1089.5454733806098 1089.54487496793 41.686 1 0.06652537710737616 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 134869 6935 YAAQASQAL True NCI_RA007_Epitope_Rep3 921.4555957470499 921.45448993586 34.387 2 0.06651600032424575 0.0042231215907091325 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'ENST00000462163.1_1_20:35807747-35832332:+|nuORF'] 91533 13195 RPADVIFAT True PC9_epitope_Rep4 988.5341804209199 988.53308993586 58.652 2 0.06651441587066118 0.0042231215907091325 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 83698 5426 QEAPPPPPP True H1975_Epitope_Rep1 928.4654321547598 928.46432993586 25.928 2 0.06651433433253975 0.0042231215907091325 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 75782 4727 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 25.591 2 0.06651061530576662 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 24591 20796 FAMEIDPSL True PC9_epitope_Rep4 1021.4790336135699 1021.47792993586 88.14 2 0.0664983433470922 0.0042231215907091325 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 94840 9570 RYMNHMQSL True PC9_epitope_Rep1 1178.5324832521 1178.5308449037902 41.669 3 0.06649462183909711 0.0042231215907091325 0.9438714419765777 ['ENSG00000166233|ENST00000379887|ARIH1'] 52721 13933 KQLDDLKVEL True PC9_epitope_Rep4 1199.6761531969898 1199.6750499358602 61.496 2 0.06645408905970059 0.0042231215907091325 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF', 'ENST00000446039.2_1_7:27309195-27309288:-|nuORF', 'ENST00000495728.1_1_9:127623696-127624209:-|nuORF'] 99042 5606 SKTSAQVVL True NCI_RA007_Epitope_Rep5 931.5338460677499 931.53274993586 28.251 2 0.0664461358114479 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'ENST00000528593.1_1_11:46804822-46806223:-|nuORF'] 47520 13673 IYLPEVRKI True PC9_epitope_Rep4 1129.68593003505 1129.68427490379 60.484 3 0.06643685594277805 0.0042231215907091325 0.9438714419765777 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 44337 20164 IMFVQEEAL True PC9_epitope_Rep6 1078.53688284286 1078.53578993586 90.235 2 0.06643614158824719 0.0042231215907091325 0.9438714419765777 ['ENSG00000010322|ENST00000345716|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 76154 8576 NRSDPVTL True PC9_epitope_Rep1 900.46649478392 900.46538993586 37.824 2 0.0664359762222174 0.0042231215907091325 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 25355 14928 FEGIVTDLIR True NCI_RA007_Epitope_Rep2 1161.63937376545 1161.63826993586 62.745 2 0.06643241511411704 0.0042231215907091325 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 6610 17955 APWPPKGLVPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 77.118 2 0.06643180981240486 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 109773 12310 THISDTSVVL True PC9_epitope_Rep4 1070.56078909158 1070.56027496793 55.162 1 0.06642806002427569 0.0042231215907091325 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 53253 16073 KTFSEILNRV True PC9_epitope_Rep5 1205.67682190333 1205.67572993586 66.814 2 0.06642628363031722 0.0042231215907091325 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 108700 13679 TEMDPVIIA True H1975_Epitope_Rep2 987.4946836777099 987.49358993586 57.757 2 0.06642255819061052 0.0042231215907091325 0.9438714419765777 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54'] 83708 5537 QEAPPPPPP True H1975_Epitope_Rep2 928.4654321547598 928.4648849679301 26.306 1 0.06642049257287237 0.0042231215907091325 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 71873 9358 MPNGDHIVSA True PC9_epitope_Rep1 1039.47567956863 1039.4745899358602 40.853 2 0.06642041022356247 0.0042231215907091325 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 90140 7972 RGYGATVSL True NCI_RA007_Epitope_Rep4 922.4872302284999 922.48612993586 37.419 2 0.06641996886471017 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000099998|P36269-2|GGT5', 'ENSG00000099998|ENST00000327365|GGT5', 'nc|ENSG00000099998|P36269-3|GGT5'] 139207 15852 YSVETVTLL True H1975_Epitope_Rep2 1023.5488274255499 1023.5482749679301 66.17 1 0.06641627466061503 0.0042231215907091325 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 44883 9860 IQDDAVHTL True PC9_epitope_Rep5 1010.50327421546 1010.50216993586 42.896 2 0.06641564220895152 0.0042231215907091325 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 63883 21510 LPVLIPVAS True PC9_epitope_Rep1 907.5742543277499 907.57314993586 87.573 2 0.06640934290113376 0.0042231215907091325 0.9438714419765777 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 125976 10310 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.49088993586 44.542 2 0.06639176077289685 0.0042231215907091325 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 57897 8320 LEQIGAPQA True H1975_Epitope_Rep2 925.4868958753299 925.48578993586 36.955 2 0.06637958401236736 0.0042231215907091325 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 77134 13942 NYATRIVTL True PC9_epitope_Rep6 1049.58694426977 1049.58584993586 65.477 2 0.06636057245880096 0.0042231215907091325 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 32090 8525 GEYGDSPVP True H1975_Epitope_Rep2 919.3923267841499 919.39177496793 37.747 1 0.06635007306800561 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 23986 19035 EYPDRIMNTF True PC9_epitope_Rep5 1284.5808729131597 1284.5802749679299 78.246 1 0.06634725542739456 0.0042231215907091325 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 70522 18310 LYTEKFEEF True PC9_epitope_Rep5 1204.5652057656796 1204.56467496793 75.444 1 0.06634021248164823 0.0042231215907091325 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 75930 6421 NREENILNR True PC9_epitope_Rep1 1156.5948831845199 1156.59322490379 29.505 3 0.06632128390123303 0.0042231215907091325 0.9438714419765777 ['PIK3CA|p.K111N|1|0.06|ENSG00000121879|chr3:179199158-179199158|G/C|missense_variant'] 139917 12858 YVFPGVTRL True H1975_Epitope_Rep1 1050.58621599378 1050.5851099358601 54.527 2 0.06630829022058726 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 110145 21781 TIDDGIFEV True PC9_epitope_Rep3 1007.48114178855 1007.48057496793 89.079 1 0.06627035039517377 0.0042231215907091325 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 40045 5918 HQVPAVSSV True PC9_epitope_Rep6 922.4872302285 922.48612993586 31.038 2 0.06624669549239244 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 18755 11944 ELDPNNAVYY True H1975_Epitope_Rep1 1196.53496826656 1196.5338699358601 50.947 2 0.06624651268930784 0.0042231215907091325 0.9438714419765777 ['ENSG00000197860|ENST00000381007|SGTB'] 110035 7967 THVGPTPAI True PC9_epitope_Rep4 891.48141657207 891.48030993586 38.09 2 0.06624196387097267 0.0042231215907091325 0.9438714419765777 ['ENSG00000157259|ENST00000287957|GATAD1'] 67373 14194 LTDTFTAYY True H1975_Epitope_Rep1 1093.49679185269 1093.49627496793 59.775 1 0.06622277147165122 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 31354 5118 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 24.764 2 0.06620858484951714 0.0042231215907091325 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 4782 9190 ALEISALK True H1975_Epitope_Rep3 843.5065686907499 843.50546993586 40.341 2 0.06620391095214806 0.0042231215907091325 0.9438714419765777 ['ENST00000490918.5_1_6:3138827-3138989:+|nuORF'] 29255 20403 FVDFNDPNF True PC9_epitope_Rep4 1113.47672511445 1113.47562993586 86.627 2 0.06620300150946166 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 42461 14935 IEQPTPFLP True H1975_Epitope_Rep3 1040.5542471591598 1040.55367496793 62.834 1 0.06620142106668196 0.0042231215907091325 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 21653 12904 ERTSFNYAM True PC9_epitope_Rep1 1117.4862442523297 1117.4851499358601 54.507 2 0.06619655408157311 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 136570 10337 YHSSGGLEL True PC9_epitope_Rep2 961.4505103666099 961.44940993586 45.088 2 0.06617934203849536 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000463118.1_1_7:91729006-91736737:+|nuORF'] 120274 17088 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 70.88 2 0.06617097942336304 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 130891 12731 VVHDGFEGL True PC9_epitope_Rep4 971.47124581119 971.47014993586 56.824 2 0.06616378541813733 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 26723 15769 FLDGNELTL True NCI_RA007_Epitope_Rep3 1020.51277627 1020.51166993586 69.666 2 0.06615147725365719 0.0042231215907091325 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 72899 20682 NAVVELVTV True PC9_epitope_Rep3 942.5385970950199 942.5380449679301 84.827 1 0.06614569425990927 0.0042231215907091325 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 26467 19670 FIPPDGNFRL True PC9_epitope_Rep2 1174.61349337078 1174.6123899358602 81.047 2 0.06614558492359583 0.0042231215907091325 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 17221 15662 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50708496793 65.255 1 0.06614386570998695 0.0042231215907091325 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 123711 20017 VIPTNVPEL True PC9_epitope_Rep3 980.5542471591599 980.55314993586 82.243 2 0.0661312111073171 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 46751 18045 IVAPGTFEV True PC9_epitope_Rep6 931.5014833103099 931.5009349679301 82.041 1 0.0661175272605513 0.0042231215907091325 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 70215 23753 LYLPSFFTY True PC9_epitope_Rep3 1149.57464825057 1149.5740749679298 96.651 1 0.06610643409372886 0.0042231215907091325 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 72895 20768 NAVVELVTV True PC9_epitope_Rep1 942.5385970950199 942.5380449679301 84.712 1 0.06610509875863715 0.0042231215907091325 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 96219 12035 SEEPAEILPPA True H1975_Epitope_Rep2 1151.5710194221099 1151.56992993586 51.374 2 0.0661022110148997 0.0042231215907091325 0.9438714419765777 ['ENSG00000131370|ENST00000383791|SH3BP5'] 21579 5521 ERSGVNSEL True PC9_epitope_Rep3 989.47778774361 989.47668993586 26.317 2 0.06609949834011003 0.0042231215907091325 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 26048 9072 FHDLEGNAV True PC9_epitope_Rep6 1000.4614094034799 1000.46030993586 44.961 2 0.0660837671922962 0.0042231215907091325 0.9438714419765777 ['ENSG00000099219|ENST00000339450|ERMP1'] 103362 15012 SQVMQGMGV True PC9_epitope_Rep5 935.4204731916299 935.41936993586 62.747 2 0.06606931472076635 0.004238457101296617 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 95209 8436 SAAM[Oxidation]PGASL True PC9_epitope_Rep5 819.37965430591 819.37854993586 37.392 2 0.06606839590981237 0.004238457101296617 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 130877 4998 VVGVGMTK True NCI_RA007_Epitope_Rep4 789.44186025921 789.44076993586 25.705 2 0.06605796894416507 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 88288 17154 QYIEELQKF True PC9_epitope_Rep4 1196.6077392839995 1196.60664993586 73.989 2 0.06605463945875188 0.004238457101296617 0.9438714419765777 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 2068 6479 AELGLTRAA True H1975_Epitope_Rep2 900.5028802926399 900.50178993586 29.839 2 0.06604170653986408 0.004238457101296617 0.9438714419765777 ['ENSG00000148331|ENST00000277458|ASB6', 'nc|ENSG00000148331|Q9NWX5-2|ASB6'] 138471 8033 YRGGSISV True PC9_epitope_Rep1 837.43446637965 837.43336993586 35.72 2 0.06603837894579877 0.004238457101296617 0.9438714419765777 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1'] 137771 22082 YNTLLPYTF True PC9_epitope_Rep3 1130.56481184286 1130.56370993586 90.234 2 0.06603367869783366 0.004238457101296617 0.9438714419765777 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant'] 129061 17631 VTAPELNSI True PC9_epitope_Rep2 942.5022115863001 942.50110993586 73.099 2 0.06603255177893833 0.004238457101296617 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF'] 138324 15577 YRAPEVLL True PC9_epitope_Rep2 959.5440168286299 959.54346496793 65.191 1 0.06600313419932373 0.004238457101296617 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 70510 18401 LYTEKFEEF True PC9_epitope_Rep1 1204.5652057656796 1204.56467496793 75.57 1 0.06597761154703027 0.004238457101296617 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 88558 13938 RAIEGLATL True PC9_epitope_Rep4 942.5498304850599 942.54872993586 61.515 2 0.06597393396327941 0.004238457101296617 0.9438714419765777 ['ENSG00000103326|ENST00000219611|CAPN15', 'CAPN15|p.E990Dfs*41|1|0.17|ENSG00000103326|chr16:552926-552932|GAGAACC/-|frameshift_variant'] 70874 7350 MEGPTPVSA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 33.212 1 0.06596944414313845 0.004238457101296617 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 120284 16690 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 69.202 2 0.06596516311695495 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 106197 21934 SVPIEIPTI True PC9_epitope_Rep1 967.5589981864299 967.5584449679301 89.185 1 0.0659611606465206 0.004238457101296617 0.9438714419765777 ['ENSG00000112996|ENST00000507110|MRPS30', 'MRPS30|p.C266Y|1|0.42|ENSG00000112996|chr5:44811964-44811964|G/A|missense_variant'] 11768 14901 DHIHIIAL True PC9_epitope_Rep4 930.52870111766 930.52760993586 65.258 2 0.06596089226494546 0.004238457101296617 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 1870 5442 AEIGEHVAP True H1975_Epitope_Rep2 921.45559574705 921.45448993586 25.959 2 0.06596063165693662 0.004238457101296617 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 104804 17045 STDPYLDDFYY True H1975_Epitope_Rep1 1397.5663279644898 1397.56522993586 70.989 2 0.06595887204314822 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 35732 4335 GTSSVIVSR True NCI_RA007_Epitope_Rep4 904.4977949122 904.49668993586 23.018 2 0.0659429854155925 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 37701 17439 HAMTEFLEV True PC9_epitope_Rep6 1075.50083168731 1075.4997299358602 79.694 2 0.06593795125996267 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000575246.6_1_17:4711576-4721404:+|nuORF'] 21106 8983 ERDPRSLTL True PC9_epitope_Rep2 1085.5829215184901 1085.58182993586 39.907 2 0.06593686760021403 0.004238457101296617 0.9438714419765777 ['ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1'] 71445 22008 MISLEIPQV True PC9_epitope_Rep2 1028.55761828744 1028.55652993586 90.125 2 0.0659311658935791 0.004238457101296617 0.9438714419765777 ['ENSG00000111231|ENST00000228827|GPN3', 'nc|ENSG00000111231|Q9UHW5-2|GPN3', 'nc|ENSG00000111231|Q9UHW5-3|GPN3'] 74408 7461 NIVEAAAVR True PC9_epitope_Rep6 941.5294293936498 941.52832993586 37.937 2 0.06592354808153113 0.004238457101296617 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'RPS26|p.I41M|1|0.12|ENSG00000197728|chr12:56042544-56042544|T/G|missense_variant', 'ENST00000475510.1_1_3:124452395-124452491:-|nuORF', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 137490 21238 YLPPGFLSA True PC9_epitope_Rep1 963.50656869075 963.5060249679301 86.516 1 0.06591612799313586 0.004238457101296617 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 17187 15693 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 65.185 2 0.06591286137248988 0.004238457101296617 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 48360 8150 KEAIETIVA True H1975_Epitope_Rep1 972.5491617787198 972.54806993586 36.29 2 0.06590987287247825 0.004238457101296617 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 107951 19210 TAYDNFVEL True PC9_epitope_Rep6 1070.49204082542 1070.49094993586 86.543 2 0.06590573890324974 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 31979 10413 GETEDTFIA True H1975_Epitope_Rep2 981.4291062156899 981.42855496793 45.068 1 0.06590327970332924 0.004238457101296617 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000522954.1_1_17:4859850-4860339:+|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 20779 18107 EQLSFLVL True NCI_RA007_Epitope_Rep3 947.53278343859 947.53168993586 79.346 2 0.06590258577053588 0.004238457101296617 0.9438714419765777 ['ENSG00000182810|ENST00000332395|DDX28'] 7083 6231 AQYDELAR True NCI_RA007_Epitope_Rep2 964.4614094034799 964.46030993586 28.843 2 0.06589741303173291 0.004238457101296617 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000402024.2_1_6:116778987-116779080:-|nuORF', 'ENST00000398525.2_1_2:65894186-65894534:+|nuORF', 'ENST00000436075.1_1_22:20837457-20837766:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 109522 7323 THAGAHLDL True PC9_epitope_Rep1 933.4668291370899 933.4657299358599 32.98 2 0.06588832221172179 0.004238457101296617 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3470835-3470958:-|nuORF'] 101630 16425 SPFGTITSA True PC9_epitope_Rep2 879.43379767331 879.43270993586 68.422 2 0.06588795947846479 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 58350 10999 LEVDPNIQA True H1975_Epitope_Rep2 997.50802524273 997.50692993586 47.334 2 0.06588666534550075 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000441609.1_1_6:162989483-162989972:+|nuORF', 'ENST00000433288.2_1_1:151922871-151923141:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931'] 26788 21744 FLDSTSPLL True PC9_epitope_Rep1 991.52261267771 991.52150993586 88.471 2 0.06588614215091068 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 86522 12785 QRALLANAL True PC9_epitope_Rep4 968.5767139392399 968.57560993586 57.039 2 0.06586974615129565 0.004238457101296617 0.9438714419765777 ['ENSG00000109133|ENST00000504986|TMEM33'] 26464 19915 FIPPDGNFRL True PC9_epitope_Rep1 1174.61349337078 1174.6123899358602 81.421 2 0.06586115281375082 0.004238457101296617 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 23618 20196 EYFKSFNF True PC9_epitope_Rep1 1080.4916469026 1080.4905499358601 82.513 2 0.06585916292340817 0.004238457101296617 0.9438714419765777 ['ENSG00000151470|ENST00000425929|C4orf33'] 102140 12927 SPREVFFRV True PC9_epitope_Rep4 1135.61382772395 1135.61218490379 57.608 3 0.06585714161544881 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000087088|Q07812-6|BAX', 'nc|ENSG00000087088|Q07812-4|BAX', 'nc|ENSG00000087088|Q07812-7|BAX', 'nc|ENSG00000087088|Q07812-8|BAX', 'ENST00000513545.5_1_19:49458896-49464890:+|nuORF', 'ENSG00000087088|ENST00000345358|BAX', 'nc|ENSG00000087088|Q07812-5|BAX', 'nc|ENSG00000087088|Q07812-2|BAX'] 30878 9840 GARLQLQAL True NCI_RA007_Epitope_Rep4 968.5767139392398 968.57560993586 44.697 2 0.06583469236810673 0.004238457101296617 0.9438714419765777 ['SVA_D_dup1229|chr17:30522805-30524227:+|1.1342495796522174|0.476847412502663|1.25|502.0|48|1|anti-sense'] 108543 14471 TEGEPPFLP True H1975_Epitope_Rep2 985.4756624852898 985.47511496793 60.82 1 0.06582891965756693 0.004238457101296617 0.9438714419765777 ['ENSG00000241058|ENST00000377304|NSUN6'] 27657 10060 FQDDPHAGL True PC9_epitope_Rep1 998.4457593393398 998.44466993586 43.566 2 0.0658281044375771 0.004238457101296617 0.9438714419765777 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 103423 22983 SQYPEIIFL True PC9_epitope_Rep2 1108.580461907 1108.57936993586 93.899 2 0.06582649294989891 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 52556 12443 KPSVNSFISA True PC9_epitope_Rep2 1048.55530978832 1048.5542099358602 53.167 2 0.06582449625973334 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000177683|Q7Z6K1-2|THAP5', 'ENSG00000177683|ENST00000415914|THAP5'] 46259 9762 ITDVDNGYY True H1975_Epitope_Rep3 1058.4556553167 1058.45454993586 42.572 2 0.06582144551662104 0.004238457101296617 0.9438714419765777 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 115713 11369 TVLERVEGA True PC9_epitope_Rep3 972.5240096600398 972.52290993586 48.735 2 0.0658131908221516 0.004238457101296617 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 75625 10476 NQSDTSVSL True PC9_epitope_Rep2 949.43525422529 949.4347049679301 45.612 1 0.06579597104115537 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 89281 4135 RELEVQHPAA True H1975_Epitope_Rep2 1148.59382055536 1148.59272993586 20.999 2 0.0657862598846997 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 96464 8193 SEITDTVAA True H1975_Epitope_Rep2 905.43419159613 905.43364496793 36.467 1 0.06577498395616746 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 102429 12448 SPVYVGRVV True PC9_epitope_Rep3 974.5549158654999 974.55380993586 52.905 2 0.06576811251341601 0.004238457101296617 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 72906 14940 NAVYTFETL True NCI_RA007_Epitope_Rep4 1056.51277627 1056.51166993586 64.932 2 0.065753076579494 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 1078 10905 AEAPADPFA True H1975_Epitope_Rep2 887.40249754503 887.40194496793 46.976 1 0.06573370169550437 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000177674|Q6RW13-2|AGTRAP', 'ENSG00000177674|ENST00000314340|AGTRAP', 'ENST00000471765.1_1_1:11807599-11814482:+|nuORF', 'ENST00000510878.1_1_1:11796255-11810246:+|nuORF', 'ENST00000491346.5_1_1:11806200-11810246:+|nuORF', 'ENST00000476512.5_1_1:11806200-11810246:+|nuORF'] 17485 8966 EHGPNPIL True PC9_epitope_Rep2 875.45011644379 875.44900993586 39.844 2 0.06573016995961031 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 97811 13647 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 57.559 2 0.06571716261816789 0.004238457101296617 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 74049 13046 NHSGAVVLL True PC9_epitope_Rep5 908.50796567308 908.50686993586 55.186 2 0.06571096007495612 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 1506 6821 AEEPNAAVP True H1975_Epitope_Rep2 896.4239612655998 896.42286993586 31.155 2 0.06570900559606188 0.004238457101296617 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'HSP90AB1|p.E707K|1|0.33|ENSG00000096384|chr6:44253542-44253542|G/A|missense_variant'] 133330 7142 WESPAQNTA True H1975_Epitope_Rep2 1002.4406739589 1002.43956993586 32.405 2 0.06568746970868589 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000072062|P17612-2|PRKACA', 'ENSG00000072062|ENST00000308677|PRKACA', 'ENST00000536649.5_1_19:14208073-14223129:-|nuORF'] 45328 7960 ISDAPAPAY True H1975_Epitope_Rep2 903.43379767331 903.43324496793 35.566 1 0.06567982094038222 0.004238457101296617 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 72256 17721 MRYVASYLLA True PC9_epitope_Rep6 1185.6216155263298 1185.6205099358601 80.798 2 0.06567884784488592 0.004238457101296617 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 72208 6835 MRSPQMVSA True PC9_epitope_Rep4 1005.47357139365 1005.47246993586 33.511 2 0.06567848837555261 0.004238457101296617 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 2628 7578 AESPGVPVA True H1975_Epitope_Rep3 825.4232329896099 825.4226849679301 34.131 1 0.06567000266164216 0.004238457101296617 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 8496 9231 ATVGHGLTAV True PC9_epitope_Rep5 924.5028802926399 924.50178993586 40.454 2 0.06566469318542625 0.004238457101296617 0.9438714419765777 ['ENSG00000197712|ENST00000358869|FAM114A1'] 37724 11760 HASDRIIAL True PC9_epitope_Rep3 994.5559784946599 994.55488993586 50.255 2 0.06566008633289092 0.004238457101296617 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 279 16990 AAGTVFTTV True PC9_epitope_Rep3 865.4545331178899 865.4539849679301 70.512 1 0.06565917779074569 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 60129 16377 LHVPGPMAV True PC9_epitope_Rep3 919.49495846123 919.49386993586 68.132 2 0.06564666732172263 0.004238457101296617 0.9438714419765777 ['ENSG00000102243|ENST00000370634|VGLL1'] 35728 4699 GTSSVIVSR True NCI_RA007_Epitope_Rep1 904.4977949122 904.49668993586 22.361 2 0.06564001894421631 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 103136 18852 SQMPAGSFITA True PC9_epitope_Rep2 1108.52229540788 1108.52118993586 77.882 2 0.06563782933667808 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 102830 18993 SQFPGAITL True PC9_epitope_Rep6 932.4967322830399 932.49618496793 85.701 1 0.06563390403764004 0.004238457101296617 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 91754 9185 RPKPIITSV True PC9_epitope_Rep3 1009.62841515893 1009.62730993586 40.269 2 0.06562199815288548 0.004238457101296617 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 2219 7670 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.4390649679301 34.454 1 0.06559717507641233 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 132785 11072 VYSQIPAAVKL True NCI_RA007_Epitope_Rep3 1187.6914093383098 1187.6903099358601 50.653 2 0.06559071895339429 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 53840 12080 KYGNLSNFL True NCI_RA007_Epitope_Rep3 1054.54474510462 1054.54364993586 54.637 2 0.0655885765363527 0.004238457101296617 0.9438714419765777 ['FLT4|p.Q1201Rfs*12|1|0.11|ENSG00000037280|chr5:180611414-180611415|CT/-|frameshift_variant', 'nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4'] 89160 6802 REHPLWQA True NCI_RA007_Epitope_Rep4 1035.5250127195497 1035.52390993586 32.789 2 0.06557729956806667 0.004238457101296617 0.9438714419765777 ['ENSG00000198113|ENST00000357503|TOR4A'] 27977 22304 FQTDLIYNL True PC9_epitope_Rep1 1125.5706254992901 1125.5695299358601 90.605 2 0.06557153373179173 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 32754 10509 GIAGSLKTV True PC9_epitope_Rep1 844.5018176634801 844.50072993586 45.313 2 0.06557056801858961 0.004238457101296617 0.9438714419765777 ['ENSG00000008083|ENST00000341776|JARID2'] 61350 4145 LLEGEESR True NCI_RA007_Epitope_Rep5 931.4610750503099 931.45996993586 22.446 2 0.06555866552620329 0.004238457101296617 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 140003 22319 YVLDDLIVA True PC9_epitope_Rep2 1019.5539128059899 1019.55280993586 91.332 2 0.06553087961436876 0.004238457101296617 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 85082 19999 QIPVKWIGV True PC9_epitope_Rep3 1038.6226015024997 1038.62150993586 82.171 2 0.06552719782583473 0.004238457101296617 0.9438714419765777 ['ENSG00000035687|ENST00000366535|ADSS2'] 35307 12363 GSSGGVIYL True H1975_Epitope_Rep3 851.43888305375 851.43833496793 52.74 1 0.06552546079166417 0.004238457101296617 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 48008 14314 KAINVFVSA True PC9_epitope_Rep5 947.54401682863 947.54290993586 60.062 2 0.06552171145577007 0.004238457101296617 0.9438714419765777 ['ENSG00000114209|ENST00000392750|PDCD10'] 72524 19045 MVDGTLLLL True NCI_RA007_Epitope_Rep4 973.5518046310099 973.55125496793 82.381 1 0.0655121371323797 0.004238457101296617 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 26065 10625 FHDPDSAVV True PC9_epitope_Rep5 985.4505103666099 985.44940993586 45.856 2 0.06548350796779516 0.004238457101296617 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 60524 23282 LIPEYLNFI True PC9_epitope_Rep2 1120.61684741572 1120.61574993586 95.038 2 0.06547213476452947 0.004238457101296617 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 139288 6320 YTDKIM[Oxidation]TY True H1975_Epitope_Rep3 1049.47394861357 1049.47284993586 29.303 2 0.06546799945700908 0.004238457101296617 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 138038 4069 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 21.923 2 0.06544719873769986 0.004238457101296617 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 1181 7620 AEDDLNTVA True H1975_Epitope_Rep2 946.42435518842 946.4238049679301 34.263 1 0.06544046465062457 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 17214 14237 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 62.668 2 0.06543274974186873 0.004238457101296617 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 126834 4889 VPSYPSKSA True PC9_epitope_Rep5 934.47599683846 934.47488993586 23.846 2 0.06543144731045272 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 17185 15581 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50708496793 64.754 1 0.06542382027463153 0.004238457101296617 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 96115 9897 SEDSPPPLP True H1975_Epitope_Rep3 937.4392769765699 937.43872496793 43.1 1 0.06541443467539244 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12'] 88897 6887 REAQSFISA True NCI_RA007_Epitope_Rep5 1007.5036085686298 1007.50250993586 33.171 2 0.0654126317995758 0.004238457101296617 0.9438714419765777 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519259.5_1_5:65459659-65459779:+|nuORF'] 140586 13855 YYLTHGLYL True NCI_RA007_Epitope_Rep4 1141.58079626017 1141.5796899358602 60.555 2 0.06539713678404373 0.004238457101296617 0.9438714419765777 ['nc|ENSG00000101464|Q9H490-2|PIGU', 'ENSG00000101464|ENST00000217446|PIGU'] 493 6531 AAPAEEPAAAA True PC9_epitope_Rep5 967.4610750503098 967.45996993586 30.094 2 0.06538515373598362 0.004238457101296617 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 122818 6085 VGVNGFGR True NCI_RA007_Epitope_Rep5 804.4242360491198 804.42312993586 30.087 2 0.06537735313364088 0.004238457101296617 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 105949 20712 SVLGAITSV True PC9_epitope_Rep3 845.48583324617 845.48472993586 84.942 2 0.0653703377423086 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 34656 7050 GQKPGGSDFL True NCI_RA007_Epitope_Rep3 1004.4927095317599 1004.49160993586 34.85 2 0.06535880345809686 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000128989|P56211-2|ARPP19', 'ENSG00000128989|ENST00000249822|ARPP19', 'nc|ENSG00000143420|O43768-6|ENSA', 'nc|ENSG00000143420|O43768-5|ENSA', 'nc|ENSG00000143420|O43768-2|ENSA', 'ENSG00000143420|ENST00000369014|ENSA', 'nc|ENSG00000143420|O43768-9|ENSA', 'nc|ENSG00000143420|O43768-7|ENSA', 'nc|ENSG00000143420|O43768-3|ENSA', 'nc|ENSG00000143420|O43768-4|ENSA', 'nc|ENSG00000143420|O43768-8|ENSA'] 95381 10304 SAIGLADPP True H1975_Epitope_Rep2 839.4388830537499 839.43778993586 44.64 2 0.06534294669658335 0.004255745256095729 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 86270 10208 QQDKQQLVL True PC9_epitope_Rep1 1098.6033226099 1098.6022299358601 44.144 2 0.06534034893974028 0.004255745256095729 0.9438714419765777 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant'] 63577 23191 LPLLIAPALAA True PC9_epitope_Rep1 1061.68486740589 1061.68376993586 93.999 2 0.06532946370601093 0.004255745256095729 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 31927 12926 GEQWTPIEP True H1975_Epitope_Rep3 1055.4923751785898 1055.49187496793 54.948 1 0.06531438258278172 0.004255745256095729 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 96831 9663 SESLIKQIP True H1975_Epitope_Rep1 1013.57571087973 1013.5746099358599 42.094 2 0.06530446074317375 0.004255745256095729 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 103378 20612 SQVQQLISL True PC9_epitope_Rep2 1014.5709598524599 1014.56986993586 84.718 2 0.06527584462476484 0.004255745256095729 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR'] 89336 4995 REMEEAPVA True H1975_Epitope_Rep2 1030.4753452154598 1030.4742499358601 24.298 2 0.06527514343616088 0.004255745256095729 0.9438714419765777 ['ENSG00000102302|ENST00000375135|FGD1'] 31997 12749 GETIFVTAP True NCI_RA007_Epitope_Rep3 933.48074786573 933.4801949679301 57.385 1 0.06527315696708537 0.004255745256095729 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 86167 4751 QPSQPVTSA True PC9_epitope_Rep2 913.4505103666099 913.44940993586 23.647 2 0.06526460146004726 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 52325 12192 KPANVFITA True PC9_epitope_Rep5 959.54401682863 959.54346496793 51.886 1 0.06526394318098717 0.004255745256095729 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 34562 18453 GQFGVGFYSA True PC9_epitope_Rep6 1031.4712458111896 1031.47014993586 83.621 2 0.06526304884899209 0.004255745256095729 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 4070 12657 AHSDAQALVL True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 53.689 2 0.0652560804499964 0.004255745256095729 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 20977 18871 ERADPLFL True PC9_epitope_Rep1 959.5076313199099 959.50652993586 77.372 2 0.06525493515542496 0.004255745256095729 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 123268 12998 VHQLSVTL True PC9_epitope_Rep2 895.51271670035 895.51160993586 55.283 2 0.06525236702362265 0.004255745256095729 0.9438714419765777 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000485075.1_1_15:78562865-78566840:+|nuORF', 'ENST00000399417.3_1_X:106595227-106595875:-|nuORF', 'nc|ENSG00000086061|P31689-2|DNAJA1', 'ENSG00000086061|ENST00000330899|DNAJA1'] 4712 17116 ALDSTNVEL True PC9_epitope_Rep1 960.47639076128 960.47528993586 70.661 2 0.06524757483723509 0.004255745256095729 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 86054 17955 QPLPVILHV True PC9_epitope_Rep6 1014.6226015025001 1014.62150993586 81.693 2 0.06524296022315883 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ATF7IP|p.S777C|1|0.33|ENSG00000171681|chr12:14460666-14460666|C/G|missense_variant'] 103882 21307 SRLGLPLLL True PC9_epitope_Rep2 980.63825156664 980.63714993586 87.421 2 0.06522413156157411 0.004255745256095729 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 94004 9599 RVQDAFAAA True PC9_epitope_Rep5 947.4824792012298 947.48138993586 41.884 2 0.06521362863841412 0.004255745256095729 0.9438714419765777 ['ENSG00000103257|ENST00000261622|SLC7A5'] 44082 18277 ILLPRIIEA True PC9_epitope_Rep6 1036.6644663144798 1036.6633699358601 82.944 2 0.06521216015705965 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 123687 6556 VIPELNGK True H1975_Epitope_Rep3 868.50181766348 868.50072993586 30.178 2 0.0652076301401089 0.004255745256095729 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 3963 18552 AHEGSIFAL True PC9_epitope_Rep3 943.4763311916299 943.4752299358599 76.579 2 0.06520117311415291 0.004255745256095729 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3'] 34990 8553 GRADGYVL True PC9_epitope_Rep6 849.43446637965 849.43336993586 42.666 2 0.06518947765389123 0.004255745256095729 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 102353 5563 SPVFTSRSAA True PC9_epitope_Rep4 1021.51925863277 1021.51816993586 28.164 2 0.06518926135763248 0.004255745256095729 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 123688 7044 VIPELNGK True NCI_RA007_Epitope_Rep1 868.50181766348 868.50072993586 31.395 2 0.06518494715403385 0.004255745256095729 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 27092 16118 FLPTLLHQA True PC9_epitope_Rep6 1038.58621599378 1038.5851099358601 74.339 2 0.06518390262580495 0.004255745256095729 0.9438714419765777 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF'] 95 13345 AAAPVVPAV True PC9_epitope_Rep6 793.4697892592098 793.46868993586 62.993 2 0.06518258669470431 0.004255745256095729 0.9438714419765777 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 66988 21537 LTAEDLFEA True PC9_epitope_Rep3 1007.4811417885498 1007.48057496793 88.138 1 0.06517962141387194 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 76809 16633 NVELDPEIQ True PC9_epitope_Rep1 1055.51350454599 1055.51297496793 68.807 1 0.0651776958256182 0.004255745256095729 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5'] 88405 13590 QYQEAFQKL True PC9_epitope_Rep1 1153.5767735088898 1153.57566993586 57.129 2 0.06517473798630015 0.004255745256095729 0.9438714419765777 ['ENSG00000082516|ENST00000285873|GEMIN5'] 73159 9117 NEDLRSWTA True H1975_Epitope_Rep2 1090.50433684462 1090.50377496793 40.022 1 0.06517377557906673 0.004255745256095729 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'ENST00000474381.1_1_6:31323854-31324663:-|nuORF', 'ENST00000494367.1_1_6:29974674-29976922:+|nuORF', 'ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 108822 5413 TEQPSVSP True H1975_Epitope_Rep3 843.3974121645899 843.39686496793 25.883 1 0.06516304033575222 0.004255745256095729 0.9438714419765777 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.T506Pfs*15|1|0.15|ENSG00000197056|chr1:35113340-35113340|A/-|frameshift_variant'] 24260 18926 FAADIISVL True H1975_Epitope_Rep2 947.53278343859 947.53168993586 78.566 2 0.06516285073734684 0.004255745256095729 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 78202 8871 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 39.066 2 0.06516035087670957 0.004255745256095729 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 88999 4071 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 20.785 2 0.0651569116886327 0.004255745256095729 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 23557 7652 EYAKIEETM True NCI_RA007_Epitope_Rep3 1112.5059766374 1112.5048699358601 37.223 2 0.06515232048447767 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 113391 16674 TQLGPPYHIL True PC9_epitope_Rep6 1137.61824439805 1137.6171499358602 76.607 2 0.06514668946765502 0.004255745256095729 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 2660 6470 AETAAVTVA True NCI_RA007_Epitope_Rep4 831.43379767331 831.43324496793 31.484 1 0.06513634012109601 0.004255745256095729 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 96946 14838 SEVEIAWPA True H1975_Epitope_Rep3 1000.4865615221598 1000.48546993586 62.457 2 0.06511825748858761 0.004255745256095729 0.9438714419765777 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 87167 20546 QSLAGGIIGV True PC9_epitope_Rep5 913.5232813840499 913.5227349679301 84.074 1 0.06511652722709224 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 133536 20268 WHIDTILHV True PC9_epitope_Rep5 1132.60292868708 1132.60129490379 83.012 3 0.06511250853860796 0.004255745256095729 0.9438714419765777 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000556741.5_1_14:24032738-24033292:-|nuORF'] 35589 15059 GTITQVIKV True PC9_epitope_Rep1 957.58588164061 957.58478993586 62.742 2 0.0651098960611248 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000166747|O43747-2|AP1G1', 'ENSG00000166747|ENST00000299980|AP1G1'] 74123 11450 NHVTPPNVSL True PC9_epitope_Rep4 1076.56145779792 1076.56087496793 51.81 1 0.06509645768902408 0.004255745256095729 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 137467 21207 YLPDSLTQL True PC9_epitope_Rep5 1048.54407639828 1048.54357496793 86.621 1 0.06508452394114235 0.004255745256095729 0.9438714419765777 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 2182 5803 AEMTTRMVA True NCI_RA007_Epitope_Rep3 1008.47323704048 1008.47212993586 29.803 2 0.06505044588999172 0.004255745256095729 0.9438714419765777 ['ENSG00000205220|ENST00000358514|PSMB10'] 8357 10841 ATLTNILEH True NCI_RA007_Epitope_Rep4 1010.53965972418 1010.53856993586 48.55 2 0.06504557658354597 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000140853|Q86WI3-2|NLRC5', 'nc|ENSG00000140853|Q86WI3-5|NLRC5', 'nc|ENSG00000140853|Q86WI3-6|NLRC5', 'nc|ENSG00000140853|Q86WI3-4|NLRC5', 'ENSG00000140853|ENST00000688547|NLRC5', 'nc|ENSG00000140853|Q86WI3-3|NLRC5'] 6280 7684 APRPTIINA True PC9_epitope_Rep6 951.5501648382299 951.54906993586 38.884 2 0.06502554383261494 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'ENST00000489593.1_1_9:134321978-134323403:+|nuORF'] 109844 11246 THLLNQDTL True PC9_epitope_Rep4 1053.54547338061 1053.54436993586 51.032 2 0.0650227874212784 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 24311 17554 FADFDGVLY True H1975_Epitope_Rep2 1045.4756624852898 1045.47507496793 72.831 1 0.06501567157619692 0.004255745256095729 0.9438714419765777 ['ENSG00000163466|ENST00000315717|ARPC2', 'ENST00000489598.5_1_2:219082193-219099125:+|nuORF', 'ENST00000491780.5_1_2:219082193-219100082:+|nuORF', 'ENST00000465395.5_1_2:219082193-219103574:+|nuORF'] 119988 18131 VFAGVFNTF True NCI_RA007_Epitope_Rep5 1000.50181766348 1000.50127496793 76.545 1 0.06499574098137899 0.004255745256095729 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 1338 6592 AEEDAALQA True H1975_Epitope_Rep3 916.4137905047199 916.41324496793 30.309 1 0.06498895158119282 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'nc|ENSG00000070814|Q13428-5|TCOF1'] 75754 14639 NRAINIAL True PC9_epitope_Rep1 883.5239500903899 883.52284993586 61.131 2 0.06498890895471612 0.004255745256095729 0.9438714419765777 ['ENSG00000172336|ENST00000303151|POP7'] 28811 14784 FTDGDAALEF True H1975_Epitope_Rep2 1084.4713053808398 1084.4707749679299 62.025 1 0.06497616996169021 0.004255745256095729 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 88753 10535 RDFVLPTAA True NCI_RA007_Epitope_Rep4 988.5341804209198 988.53308993586 47.368 2 0.06497489401090618 0.004255745256095729 0.9438714419765777 ['ENSG00000085491|ENST00000565488|SLC25A24'] 109621 14326 THDGSILIV True PC9_epitope_Rep4 953.51819600361 953.5176449679301 63.007 1 0.06496990351569425 0.004255745256095729 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 76838 10297 NVHAVFQEA True PC9_epitope_Rep1 1013.4930438849299 1013.49194993586 44.493 2 0.06496139359828139 0.004255745256095729 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 42241 3877 IEHDVVM[Oxidation]KA True H1975_Epitope_Rep3 1056.52738116876 1056.5262899358602 20.028 2 0.06494625310586309 0.004255745256095729 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 131759 10507 VYADQPHIF True NCI_RA007_Epitope_Rep5 1088.52909504048 1088.5279899358602 47.048 2 0.06493059709363842 0.004255745256095729 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 45989 17318 ISTEVGITNV True PC9_epitope_Rep5 1031.54989005471 1031.54937496793 71.616 1 0.06493043535958803 0.004255745256095729 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 64160 11704 LQFDKAINA True PC9_epitope_Rep6 1018.5447451046199 1018.54364993586 56.158 2 0.06492488540881453 0.004255745256095729 0.9438714419765777 ['ENSG00000140307|ENST00000396060|GTF2A2'] 119666 8577 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43872496793 37.945 1 0.06492270121978959 0.004255745256095729 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 27276 22301 FLYPFPLAL True H1975_Epitope_Rep2 1079.60555445603 1079.60497496793 92.162 1 0.06491808184155236 0.004255745256095729 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 70033 20014 LYGPSSVSF True PC9_epitope_Rep3 955.46509780159 955.46400993586 82.231 2 0.06490625189855426 0.004255745256095729 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 1367 4808 AEEEGVPRP True H1975_Epitope_Rep2 982.4719740871798 982.47086993586 23.583 2 0.0649040385543822 0.004255745256095729 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3'] 95261 11026 SADPNVVDL True H1975_Epitope_Rep2 928.45017601344 928.44906993586 47.441 2 0.06490025407948717 0.004255745256095729 0.9438714419765777 ['ENST00000567143.1_1_16:58436992-58437325:+|nuORF', 'ENSG00000181938|ENST00000318129|GINS3', 'nc|ENSG00000181938|Q9BRX5-3|GINS3'] 4056 6894 AHQQSIPAV True PC9_epitope_Rep2 949.4981292653698 949.49702993586 31.919 2 0.06489990089585972 0.004255745256095729 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 75341 7854 NQADKAINTAV True PC9_epitope_Rep5 1143.5884008217502 1143.58730993586 35.153 2 0.06488409759852794 0.004255745256095729 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 105972 19105 SVLGSLSSV True PC9_epitope_Rep4 847.4650978015901 847.46454496793 81.579 1 0.06488174483999717 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50', 'ENST00000469163.1_1_22:45574147-45579448:+|nuORF', 'ENST00000556933.1_1_14:65067322-65068336:-|nuORF', 'ENST00000502634.1_1_5:20304521-20305535:-|nuORF', 'ENST00000405676.2_1_6:25140296-25141628:+|nuORF'] 101677 17855 SPFTVGVAA True PC9_epitope_Rep1 847.4439684341899 847.44341496793 73.473 1 0.06486998211743739 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 132755 13401 VYSNSIYEL True NCI_RA007_Epitope_Rep4 1086.5233409537 1086.52277496793 58.724 1 0.06486333665441482 0.004255745256095729 0.9438714419765777 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 32780 10288 GIDIFTGK True H1975_Epitope_Rep3 849.45961849833 849.45852993586 44.624 2 0.06484742200945844 0.004255745256095729 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 24276 14443 FAAGETFL True H1975_Epitope_Rep2 854.41741933318 854.4168749679301 60.71 1 0.06484721928726786 0.004255745256095729 0.9438714419765777 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD'] 24707 20101 FAVFQTTFF True H1975_Epitope_Rep3 1106.54368247546 1106.5425899358602 84.11 2 0.0648394476201898 0.004278850965869282 0.9438714419765777 ['ENSG00000145623|ENST00000274276|OSMR', 'nc|ENSG00000145623|Q99650-2|OSMR'] 69366 22114 LVQDILLNV True PC9_epitope_Rep2 1025.6120963884498 1025.61098993586 90.538 2 0.0648387781473971 0.004278850965869282 0.9438714419765777 ['ENSG00000116922|ENST00000486637|C1orf109', 'ENST00000464178.1_1_1:38148797-38151999:-|nuORF'] 89571 6956 RESDVGVVV True H1975_Epitope_Rep3 958.5083595958998 958.50726993586 31.718 2 0.06482551212928803 0.004278850965869282 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 44542 13521 IPATPGIGA True PC9_epitope_Rep1 795.4490538146299 795.44850496793 56.865 1 0.06482412516479649 0.004278850965869282 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 127591 12346 VQYNEPLKV True PC9_epitope_Rep2 1088.5866099165999 1088.58550993586 52.798 2 0.06482359820189083 0.004278850965869282 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 138317 15726 YRAPELML True PC9_epitope_Rep6 991.5160878286299 991.51498993586 72.713 2 0.06481171152397965 0.004278850965869282 0.9438714419765777 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'nc|ENSG00000166484|Q13164-4|MAPK7', 'ENST00000570306.5_1_17:19283765-19285121:+|nuORF'] 87330 19121 QTAPEEAFIKL True PC9_epitope_Rep2 1245.6605031328497 1245.6594099358601 78.92 2 0.06479781708089503 0.004278850965869282 0.9438714419765777 ['TTC30B|p.A478Cfs*6|1|0.11|ENSG00000196659|chr2:177551332-177551333|-/A|frameshift_variant', 'TTC30A|p.A478Cfs*6|1|0.12|ENSG00000197557|chr2:177617270-177617271|-/A|frameshift_variant', 'ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 74983 23675 NLVSFLETV True PC9_epitope_Rep1 1020.54916177872 1020.54806993586 95.857 2 0.06479615734816635 0.004278850965869282 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 21015 7071 ERAQGVVL True PC9_epitope_Rep4 870.4923156089399 870.49120993586 34.463 2 0.06479535144467333 0.004278850965869282 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 4057 7934 AHQQSIPAV True PC9_epitope_Rep3 949.4981292653698 949.49702993586 35.498 2 0.06479013911134711 0.004278850965869282 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 138869 14325 YSDPSVLYM True H1975_Epitope_Rep1 1073.47394823313 1073.4733749679299 60.29 1 0.06478134630367992 0.004278850965869282 0.9438714419765777 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Cfs*12|1|0.2|ENSG00000068024|chr2:239053582-239053591|CAGGCAGCGC/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF'] 106442 16333 SVVADTPEL True PC9_epitope_Rep2 929.47057710485 929.46948993586 68.072 2 0.06477618794016085 0.004278850965869282 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1'] 101958 20684 SPLTSIISA True PC9_epitope_Rep1 887.49639792987 887.49530993586 84.385 2 0.06477439096294649 0.004278850965869282 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF'] 70817 11076 MEENFAVEAA True H1975_Epitope_Rep3 1109.46992548185 1109.4688299358602 47.696 2 0.06477433419877351 0.004278850965869282 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 32721 9547 GHSTAVVSL True PC9_epitope_Rep5 869.46068112749 869.45958993586 41.68 2 0.06477350254572638 0.004278850965869282 0.9438714419765777 ['ENSG00000156463|ENST00000359120|SH3RF2', 'SH3RF2|p.S564Qfs*64|1|0.55|ENSG00000156463|chr5:146059995-146059995|C/-|frameshift_variant', 'SH3RF2|p.A673Rfs*13|1|0.23|ENSG00000156463|chr5:146062527-146062527|G/-|frameshift_variant'] 87616 9343 QTVAVGVIK True PC9_epitope_Rep1 913.5596668927699 913.55856993586 40.795 2 0.0647727852075711 0.004278850965869282 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 9474 3482 AVYDRPGASPK True NCI_RA007_Epitope_Rep4 1159.5985715826298 1159.59691490379 19.341 3 0.06474911264018568 0.004278850965869282 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 47995 8521 KAIEQADLL True NCI_RA007_Epitope_Rep3 999.5600608155898 999.55896993586 40.588 2 0.06473195042919562 0.004278850965869282 0.9438714419765777 ['nc|ENSG00000182287|P56377|AP1S2', 'ENSG00000106367|ENST00000337619|AP1S1', 'ENSG00000182287|ENST00000672987|AP1S2', 'nc|ENSG00000182287|P56377-2|AP1S2'] 3883 8405 AHDDGRWSL True PC9_epitope_Rep4 1055.47845644995 1055.47734993586 39.794 2 0.06470306704227839 0.004324351347297905 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 2614 6807 AESLVDQSA True H1975_Epitope_Rep2 918.4294405688601 918.42834993586 31.101 2 0.06469598447442862 0.004324351347297905 0.9438714419765777 ['ENST00000506320.1_1_1:115321857-115323228:-|nuORF', 'ENST00000474562.1_1_1:115321817-115323228:-|nuORF', 'ENST00000475335.5_1_1:115321747-115323228:-|nuORF', 'ENSG00000052723|ENST00000060969|SIKE1', 'nc|ENSG00000052723|Q9BRV8-2|SIKE1'] 105963 11865 SVLGKVNEI True PC9_epitope_Rep4 957.54949613189 957.54838993586 53.414 2 0.06467632800122187 0.004324351347297905 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 115008 21901 TTLPGLLTV True PC9_epitope_Rep1 913.5484335027301 913.54788496793 89.055 1 0.06466916664449945 0.004324351347297905 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 7882 4874 ATAPPGVLK True NCI_RA007_Epitope_Rep3 852.50690304392 852.50580993586 26.155 2 0.06465293913258653 0.004324351347297905 0.9438714419765777 ['ENSG00000105538|ENST00000222145|RASIP1'] 19341 9690 ELNEFLTR True H1975_Epitope_Rep1 1020.52400966004 1020.52290993586 42.197 2 0.06465137231920669 0.004324351347297905 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 26385 12043 FIIPNVVK True H1975_Epitope_Rep3 928.57458868092 928.57348993586 51.484 2 0.06464785543478604 0.004324351347297905 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF'] 1259 7968 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 35.597 2 0.06462932882000598 0.004324351347297905 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 55427 8690 LATNAAVTVLR True H1975_Epitope_Rep1 1127.6662572196299 1127.6651699358601 38.357 2 0.06462714857394913 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 96319 11086 SEEVTPIAV True H1975_Epitope_Rep1 943.4862271689899 943.4856749679301 47.606 1 0.06462016085360346 0.004324351347297905 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 25203 8713 FEADPPGQVA True H1975_Epitope_Rep2 1029.47672511445 1029.4761749679299 38.475 1 0.0646180394001236 0.004324351347297905 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 105420 20227 SVAGGFVGL True PC9_epitope_Rep2 805.4334037504899 805.4328549679301 83.221 1 0.06461439474470415 0.004324351347297905 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6', 'SLC6A6|p.L206Cfs*11|1|0.18|ENSG00000131389|chr3:14457966-14457966|T/-|frameshift_variant'] 26737 19633 FLDGNELTL True PC9_epitope_Rep6 1020.51277627 1020.51227496793 88.178 1 0.06460621544047605 0.004324351347297905 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 47790 10020 IYQRHVYNL True PC9_epitope_Rep1 1204.6352914445197 1204.6336349037902 43.408 3 0.06459498711848731 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 59434 15028 LGLTNQPEL True PC9_epitope_Rep5 983.52876068731 983.52766993586 62.809 2 0.06459009542206803 0.004324351347297905 0.9438714419765777 ['ENSG00000179626|ENST00000641569|OR6C4'] 1059 9962 AEAIRILAA True H1975_Epitope_Rep2 926.5549158654999 926.55436496793 43.31 1 0.06458429991873185 0.004324351347297905 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 1337 6575 AEEDAALQA True H1975_Epitope_Rep3 916.4137905047199 916.41268993586 30.246 2 0.06457785824014912 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'nc|ENSG00000070814|Q13428-5|TCOF1'] 105923 10252 SVLDSTAKV True PC9_epitope_Rep3 918.5022115863 918.50110993586 44.385 2 0.06456598225933433 0.004324351347297905 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 17408 7040 EHFPNHQQL True PC9_epitope_Rep3 1148.53630567924 1148.53465490379 32.09 3 0.06456490477016025 0.004324351347297905 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 64578 17907 LRDQWFHSL True PC9_epitope_Rep5 1200.60399131624 1200.60235490379 73.896 3 0.06454199228452712 0.004324351347297905 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP'] 86505 9876 QRAHQILVL True PC9_epitope_Rep4 1076.6454622054 1076.6443699358601 45.639 2 0.06453818732754708 0.004324351347297905 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2'] 104160 3553 SSAPPLTGK True NCI_RA007_Epitope_Rep4 856.46543215476 856.46432993586 19.682 2 0.06453420892315502 0.004324351347297905 0.9438714419765777 ['PATZ1|p.Y509Ffs*13|1|0.29|ENSG00000100105|chr22:31328911-31328912|-/CAGAGGAGAAACCTAAACAAGACAAAAAGGAC|frameshift_variant', 'nc|ENSG00000100105|Q9HBE1-4|PATZ1', 'nc|ENSG00000100105|Q9HBE1-2|PATZ1', 'nc|ENSG00000100105|Q9HBE1-3|PATZ1', 'ENSG00000100105|ENST00000266269|PATZ1', 'PATZ1|p.R265Q|1|0.17|ENSG00000100105|chr22:31344809-31344809|C/T|missense_variant'] 35480 21587 GTFDIFYTA True PC9_epitope_Rep4 1033.4756624852898 1033.47507496793 91.216 1 0.06453043711109153 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 9638 11418 AYGHFGRDSF True PC9_epitope_Rep5 1155.50975657823 1155.50812490379 48.919 3 0.06452788307593163 0.004324351347297905 0.9438714419765777 ['ENSG00000168906|ENST00000306434|MAT2A', 'ENST00000477975.2_1_3:112415757-112416508:-|nuORF'] 4966 23458 ALIGILTGL True PC9_epitope_Rep5 869.55860426361 869.55750993586 95.215 2 0.06452747408000001 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7'] 24426 4587 FAGDDAPRA True NCI_RA007_Epitope_Rep4 918.4195445915 918.4184499358599 24.05 2 0.06449282841225469 0.004324351347297905 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 35933 18503 GVAPGFQVV True PC9_epitope_Rep4 872.4756029156399 872.4745099358599 79.244 2 0.06446345362352596 0.004324351347297905 0.9438714419765777 ['ENSG00000165724|ENST00000298585|ZMYND19'] 86245 10811 QPYM[Oxidation]PTVSA True PC9_epitope_Rep5 1008.4586329025999 1008.45752993586 46.574 2 0.06446128864006959 0.004324351347297905 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 75952 9377 NRFSDHVAL True PC9_epitope_Rep2 1057.53049202281 1057.52938993586 41.404 2 0.06445461176035806 0.004324351347297905 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'ENST00000473076.1_1_1:182850471-182852465:+|nuORF'] 31928 13018 GEQWTPIEP True H1975_Epitope_Rep3 1055.4923751785898 1055.49187496793 55.31 1 0.0644543180274703 0.004324351347297905 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 120850 14708 VGDPSVHLL True PC9_epitope_Rep2 935.5076313199099 935.50652993586 61.842 2 0.06445117496389656 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 129 19686 AAAWPLLL True NCI_RA007_Epitope_Rep4 853.5061747679299 853.5056249679301 85.073 1 0.06444966746125855 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 70005 20534 LYGAPGVEF True PC9_epitope_Rep2 951.4701831820299 951.46963496793 84.416 1 0.06444829311993847 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'LLGL2|p.G740Afs*31|1|0.09|ENSG00000073350|chr17:75571705-75571705|G/-|frameshift_variant', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2'] 102708 7801 SQDPYHETL True PC9_epitope_Rep6 1088.4774533904401 1088.47634993586 39.395 2 0.0644335676028097 0.004324351347297905 0.9438714419765777 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 35193 17789 GSDVVDWLY True H1975_Epitope_Rep1 1052.48147614172 1052.48097496793 74.053 1 0.0644328473034887 0.004324351347297905 0.9438714419765777 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'DVL3|p.H453Y|1|0.13|ENSG00000161202|chr3:184167924-184167924|C/T|missense_variant', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 8588 19901 AVAELNYGL True PC9_epitope_Rep3 948.4916469026 948.49109496793 81.79 1 0.06442623748589577 0.004324351347297905 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 2490 15699 AEQPWPPLP True H1975_Epitope_Rep2 1033.5232813840498 1033.52218993586 65.554 2 0.06442519510098206 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 88063 18902 QVVGGIYGV True PC9_epitope_Rep3 890.4861675993399 890.48561496793 77.929 1 0.06442007336220767 0.004324351347297905 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 126595 6410 VPPPPPIAR True H1975_Epitope_Rep3 942.56508662638 942.56398993586 29.633 2 0.06442005032781117 0.004324351347297905 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 132502 5902 VYPERSTSY True PC9_epitope_Rep2 1100.51383889916 1100.51274993586 28.097 2 0.06441974783162523 0.004324351347297905 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 35613 11351 GTLEQWIEK True NCI_RA007_Epitope_Rep3 1102.56587447202 1102.56476993586 51.762 2 0.06441155773532668 0.004324351347297905 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 87378 6245 QTDLHEHPLY True H1975_Epitope_Rep2 1251.58840082175 1251.58675490379 28.977 3 0.06439983676083519 0.004324351347297905 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF', 'nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 31988 11655 GETIFVTA True NCI_RA007_Epitope_Rep3 836.42798401688 836.42743496793 52.965 1 0.06436792252314895 0.004359306496612196 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 106483 14701 SVVGSNQLIEA True PC9_epitope_Rep6 1115.58225281215 1115.5811499358601 68.483 2 0.06436450203053333 0.004359306496612196 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 132624 11091 VYPSSLSKI True PC9_epitope_Rep6 992.5542471591599 992.55314993586 53.585 2 0.06436422756260424 0.004359306496612196 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 1089 5109 AEAPGAVAGA True H1975_Epitope_Rep2 812.4028318981999 812.4022849679301 24.731 1 0.06434832276118668 0.004359306496612196 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 136518 9107 YHNPTANSF True PC9_epitope_Rep3 1049.45665837621 1049.45556993586 39.97 2 0.06434776395614734 0.004359306496612196 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 49334 7367 KIDEHHFVAV True PC9_epitope_Rep6 1193.6193070272102 1193.61766490379 37.528 3 0.06434409085820349 0.004359306496612196 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 29576 18506 FVIRNIVEA True PC9_epitope_Rep3 1059.6076797143498 1059.60658993586 76.401 2 0.06433711963187379 0.004359306496612196 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 31588 19164 GEFTFLLPA True H1975_Epitope_Rep1 993.5171333744498 993.51658496793 79.867 1 0.06433697568343394 0.004359306496612196 0.9438714419765777 ['ENSG00000099203|ENST00000214869|TMED1'] 66587 7318 LSSPATLNSR True PC9_epitope_Rep1 1044.5563724174801 1044.55526993586 32.962 2 0.06432862365503719 0.004359306496612196 0.9438714419765777 ['CON__P00761'] 135762 11138 YENDLGITA True H1975_Epitope_Rep2 994.4607406971398 994.4596499358599 47.878 2 0.06432492169045023 0.004359306496612196 0.9438714419765777 ['ERBB2-CTTN|3|fusion', 'ERBB2-CTTN|1|fusion', 'ERBB2-CTTN|4|fusion', 'ERBB2-CTTN|2|fusion', 'ENST00000393747.3_1_11:70269077-70281851:+|nuORF', 'nc|ENSG00000085733|Q14247-3|CTTN', 'ENSG00000085733|ENST00000301843|CTTN', 'nc|ENSG00000085733|Q14247-2|CTTN'] 106892 20088 SYILRPVAF True PC9_epitope_Rep1 1064.60186605792 1064.6007699358602 82.097 2 0.06431394096581382 0.004359306496612196 0.9438714419765777 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.G520Afs*35|1|0.16|ENSG00000156222|chr15:84935495-84935495|G/-|frameshift_variant'] 1106 6262 AEAPPPKIP True H1975_Epitope_Rep2 918.51746772762 918.51636993586 29.035 2 0.06429737366440633 0.004359306496612196 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 11981 19094 DHTVGVLF True PC9_epitope_Rep5 886.45486747106 886.45376993586 78.475 2 0.0642941027032158 0.004359306496612196 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 30436 10594 GAGAPVYL True H1975_Epitope_Rep2 746.3962899657799 746.39574496793 45.772 1 0.06428947124287178 0.004359306496612196 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 64191 19144 LQIDDNVTSAV True PC9_epitope_Rep1 1173.5877321154103 1173.5866299358602 78.431 2 0.06425415387526259 0.004359306496612196 0.9438714419765777 ['ENSG00000025772|ENST00000372813|TOMM34'] 139524 19978 YTLDGGDIINA True PC9_epitope_Rep2 1150.5506183307 1150.5495299358602 82.247 2 0.06424049343253299 0.004359306496612196 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 1806 11427 AEIDASNIV True H1975_Epitope_Rep2 930.46582607758 930.4652749679301 49.006 1 0.06422347281956142 0.004359306496612196 0.9438714419765777 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 95429 18337 SALDTITTV True PC9_epitope_Rep4 919.48622716899 919.4856749679301 78.601 1 0.06421947270493938 0.004359306496612196 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 129153 18139 VTDDLVCLVY True H1975_Epitope_Rep2 1138.55801221026 1138.55747496793 75.18 1 0.06421905760090967 0.004359306496612196 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 84607 5164 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 25.239 2 0.06421103758892578 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 113605 8063 TRATEGMVVA True PC9_epitope_Rep1 1033.5226297610498 1033.5215299358601 35.838 2 0.06420876739740576 0.004359306496612196 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 100560 12640 SLPYQVSL True H1975_Epitope_Rep1 905.4858332461699 905.48528496793 53.672 1 0.06418956838360036 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000010438|P35030-5|PRSS3', 'ENSG00000010438|ENST00000379405|PRSS3', 'nc|ENSG00000010438|P35030-2|PRSS3', 'nc|ENSG00000010438|P35030-4|PRSS3', 'nc|ENSG00000010438|P35030|PRSS3'] 123536 14601 VIIEKTYSL True PC9_epitope_Rep2 1064.61176203528 1064.6106699358602 61.431 2 0.06418524648800183 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 11726 14999 DHGGVIVAI True PC9_epitope_Rep4 879.48141657207 879.48030993586 65.633 2 0.06418486682427803 0.004359306496612196 0.9438714419765777 ['ENSG00000184985|ENST00000507866|SORCS2'] 46467 11178 ITNIPFDVK True NCI_RA007_Epitope_Rep2 1045.58079626017 1045.5796899358602 48.06 2 0.0641785236910479 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 36300 4917 GVGPVPARA True PC9_epitope_Rep4 822.47118624154 822.47008993586 25.508 2 0.06417019907283467 0.004359306496612196 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 25260 9163 FEDETIRNI True H1975_Epitope_Rep1 1135.55095268387 1135.54984993586 40.152 2 0.0641662993041177 0.004359306496612196 0.9438714419765777 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 102619 19433 SQATDFGEALV True PC9_epitope_Rep4 1136.5349682665599 1136.5338699358601 82.862 2 0.06416072857910103 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 33294 14164 GLATDVQTV True PC9_epitope_Rep5 902.47091145802 902.4703649679301 59.493 1 0.06415956030944041 0.004359306496612196 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 100470 4765 SLPHRRPHF True NCI_RA007_Epitope_Rep2 1145.6206444398902 1145.61898490379 23.165 3 0.06414792928271112 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000120885|P10909-3|CLU', 'nc|ENSG00000120885|P10909-4|CLU', 'ENST00000522299.5_1_8:27457218-27472184:-|nuORF', 'nc|ENSG00000120885|P10909-6|CLU', 'ENSG00000120885|ENST00000316403|CLU', 'nc|ENSG00000120885|P10909-5|CLU', 'nc|ENSG00000120885|P10909-2|CLU'] 58223 9273 LESTPSPVV True H1975_Epitope_Rep2 927.49131254943 927.4907649679301 40.624 1 0.06413368182372332 0.004359306496612196 0.9438714419765777 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 38841 12976 HIGDAVVI True PC9_epitope_Rep2 822.4599528515 822.45884993586 55.204 2 0.06412871204987883 0.004359306496612196 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 105462 6684 SVASISLTK True NCI_RA007_Epitope_Rep3 904.52294703088 904.52184993586 33.372 2 0.0641136160795867 0.004359306496612196 0.9438714419765777 ['ENST00000298289.6_1_14:50085755-50087389:-|nuORF'] 114181 6349 TRTGSSFSV True PC9_epitope_Rep4 940.4614094034799 940.46030993586 31.497 2 0.06410777603693456 0.004359306496612196 0.9438714419765777 ['ENSG00000101473|ENST00000217455|ACOT8', 'ENST00000484783.1_1_20:44472824-44485954:-|nuORF', 'ENST00000484975.5_1_20:44472824-44477348:-|nuORF', 'ENST00000493118.5_1_20:44472824-44485929:-|nuORF'] 132524 21223 VYPFPTFQPAF True PC9_epitope_Rep6 1312.6492101731599 1312.64810993586 94.482 2 0.06409594050460388 0.004359306496612196 0.9438714419765777 ['ENSG00000132017|ENST00000254337|DCAF15'] 34657 7450 GQKPGGSDFL True NCI_RA007_Epitope_Rep4 1004.4927095317599 1004.49160993586 35.301 2 0.06408203284862649 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000128989|P56211-2|ARPP19', 'ENSG00000128989|ENST00000249822|ARPP19', 'nc|ENSG00000143420|O43768-6|ENSA', 'nc|ENSG00000143420|O43768-5|ENSA', 'nc|ENSG00000143420|O43768-2|ENSA', 'ENSG00000143420|ENST00000369014|ENSA', 'nc|ENSG00000143420|O43768-9|ENSA', 'nc|ENSG00000143420|O43768-7|ENSA', 'nc|ENSG00000143420|O43768-3|ENSA', 'nc|ENSG00000143420|O43768-4|ENSA', 'nc|ENSG00000143420|O43768-8|ENSA'] 5809 18335 APFLASAVSA True PC9_epitope_Rep4 932.4967322830399 932.49562993586 78.593 2 0.06407628725540046 0.004359306496612196 0.9438714419765777 ['ENSG00000146242|ENST00000369750|TPBG', 'TPBG|p.L117Sfs*56|1|0.45|ENSG00000146242|chr6:82365309-82365327|GCTGGCGGAGCTGGCCGCG/-|frameshift_variant'] 62905 13278 LMVDHVTEV True PC9_epitope_Rep2 1041.51648175145 1041.5153899358602 56.351 2 0.06407613197826091 0.004359306496612196 0.9438714419765777 ['ENST00000602875.5_1_5:139930287-139937028:-|nuORF', 'ENSG00000213523|ENST00000336283|SRA1'] 107097 19692 SYMFVDENTF True PC9_epitope_Rep6 1251.5117902938298 1251.51068993586 88.402 2 0.06406613599466424 0.004359306496612196 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 107195 23223 SYPAFWTSF True PC9_epitope_Rep1 1104.4916469026 1104.4905499358601 94.126 2 0.06404600594279025 0.004359306496612196 0.9438714419765777 ['ENST00000299505.6_1_19:34791118-34791184:+|nuORF'] 88017 6622 QVSPEAGVQKV True PC9_epitope_Rep4 1140.6138872935999 1140.61278993586 32.63 2 0.06401985465767365 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 99992 21371 SLITDLQTI True PC9_epitope_Rep4 1002.5597264624199 1002.55862993586 90.372 2 0.0640063276402642 0.004359306496612196 0.9438714419765777 ['ENSG00000168014|ENST00000334126|C2CD3'] 67808 22813 LTIDDGIFEV True PC9_epitope_Rep3 1120.56520576568 1120.56467496793 93.021 1 0.06400177299106269 0.004359306496612196 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 102054 8369 SPPPPPPPP True PC9_epitope_Rep3 881.4647038787699 881.46360993586 37.16 2 0.063996962503511 0.004359306496612196 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 103936 13765 SRPLSFHVL True PC9_epitope_Rep2 1054.59236400338 1054.59126993586 58.233 2 0.06399634128420761 0.004359306496612196 0.9438714419765777 ['ENST00000482540.1_1_7:8110532-8125911:+|nuORF'] 32986 11115 GIVEFASK True PC9_epitope_Rep5 849.45961849833 849.45852993586 47.744 2 0.06399427373250087 0.004359306496612196 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 38775 11798 HHYEGAVVIL True PC9_epitope_Rep6 1136.5978433066398 1136.5961849037901 56.57 3 0.06399086916376982 0.004359306496612196 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS'] 126522 19044 VPNPYIISA True PC9_epitope_Rep2 972.5280324113199 972.52692993586 78.618 2 0.06396929976030598 0.004359306496612196 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 10016 12263 AYTPFHAVL True NCI_RA007_Epitope_Rep4 1017.5283667644899 1017.52726993586 54.166 2 0.06396319668442309 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000138614|Q96SY0-4|INTS14', 'nc|ENSG00000138614|Q96SY0-3|INTS14', 'ENSG00000138614|ENST00000313182|INTS14'] 31818 10275 GEMVGALAA True H1975_Epitope_Rep2 817.4003893700499 817.3998449679301 44.529 1 0.06396094867360898 0.004359306496612196 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 54918 8774 LAGPLRPAA True PC9_epitope_Rep5 864.5181364339599 864.51702993586 38.692 2 0.0639486582979402 0.004359306496612196 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 138472 6712 YRGGSISV True PC9_epitope_Rep2 837.43446637965 837.43336993586 31.23 2 0.06394562776098935 0.004359306496612196 0.9438714419765777 ['ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1'] 95180 18306 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41156993586 75.428 2 0.06394414907581097 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 103481 6408 SRAPSVATV True PC9_epitope_Rep3 886.4872302285 886.48612993586 29.673 2 0.06394407257813237 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 2249 11786 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.51128993586 50.481 2 0.06393845081728439 0.004359306496612196 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 78203 8975 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 39.466 2 0.06393824598344505 0.004359306496612196 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 31363 5321 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.39082993586 25.543 2 0.06392986034222972 0.004359306496612196 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 7925 10369 ATDDSLYY True H1975_Epitope_Rep2 946.39199243098 946.39144496793 44.895 1 0.063924891666342 0.004359306496612196 0.9438714419765777 ['ENSG00000149260|ENST00000648180|CAPN5'] 71832 22056 MPFAGLISA True PC9_epitope_Rep1 905.46807500705 905.46696993586 89.65 2 0.0639232075915581 0.004359306496612196 0.9438714419765777 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 89575 6213 RESEGFEEHVP True H1975_Epitope_Rep3 1314.5840437173 1314.5829499358601 28.911 2 0.06392134206991963 0.004359306496612196 0.9438714419765777 ['ENSG00000119801|ENST00000261353|YPEL5'] 9051 9266 AVIREIQNA True PC9_epitope_Rep5 1012.56654317836 1012.56544993586 40.59 2 0.06391675363731562 0.004359306496612196 0.9438714419765777 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000491221.1_1_19:19762333-19764718:-|nuORF', 'ENST00000469641.5_1_19:19762333-19763700:-|nuORF', 'ENST00000473243.5_1_19:19762333-19765368:-|nuORF'] 91856 7717 RPNPPPVSV True PC9_epitope_Rep2 961.53451477409 961.53340993586 35.06 2 0.06391308550298135 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 114429 10548 TSDVGGYYY True H1975_Epitope_Rep2 1023.4185415319901 1023.41744993586 45.593 2 0.06390162575218465 0.004359306496612196 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 88965 2950 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 15.589 2 0.06388271850604817 0.004359306496612196 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 83252 9538 QADPTKLEL True NCI_RA007_Epitope_Rep5 1013.5393253710099 1013.53822993586 43.325 2 0.06387970233136177 0.004359306496612196 0.9438714419765777 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000523219.1_1_5:159833399-159834623:-|nuORF', 'ENST00000520841.1_1_5:159833399-159835410:-|nuORF'] 10925 15841 DAVLLLFANK True H1975_Epitope_Rep3 1102.6386454894598 1102.63754993586 66.38 2 0.06387960948738418 0.004359306496612196 0.9438714419765777 ['ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 67147 13473 LTDEGLLY True H1975_Epitope_Rep3 922.46476344842 922.46421496793 57.098 1 0.06387935777984907 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000136144|Q8NDN9-2|RCBTB1', 'ENSG00000136144|ENST00000378302|RCBTB1'] 39272 19437 HLPEELAEL True PC9_epitope_Rep3 1049.53932537101 1049.53822993586 79.991 2 0.06387631868918228 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 106790 19775 SYGDILHVI True PC9_epitope_Rep4 1015.53384606775 1015.53274993586 84.19 2 0.06386476275946426 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 52560 12668 KPTETLLNTV True PC9_epitope_Rep4 1114.62338934814 1114.6222899358602 56.573 2 0.06384976985796911 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000407982.6_1_9:125930502-125941310:-|nuORF'] 54063 16559 KYLTVKDYL True PC9_epitope_Rep5 1141.6383111362898 1141.63720993586 68.698 2 0.06384950300926377 0.004359306496612196 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF'] 132354 15557 VYMDWYEKF True NCI_RA007_Epitope_Rep2 1279.5583465634297 1279.55724993586 65.22 2 0.06384731005416668 0.004359306496612196 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 14845 10193 DYFEEYGK True NCI_RA007_Epitope_Rep1 1049.4341915961297 1049.4330899358602 43.66 2 0.06384429329033862 0.004359306496612196 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 101744 16555 SPHGLVMVGV True PC9_epitope_Rep3 994.5269868654999 994.52588993586 68.819 2 0.06384365986149397 0.004359306496612196 0.9438714419765777 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 112320 19273 TMIKGLYGI True PC9_epitope_Rep1 994.5521389841799 994.55104993586 78.937 2 0.06383968234703088 0.004359306496612196 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 118231 14842 VAYPKGMYDV True PC9_epitope_Rep5 1141.5477818797299 1141.54668993586 62.091 2 0.06383628861522198 0.004359306496612196 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 42906 7620 IFVGGIKENT True NCI_RA007_Epitope_Rep3 1076.5866099165999 1076.58550993586 37.1 2 0.0638327224941489 0.004359306496612196 0.9438714419765777 ['ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 76095 12772 NRNEDPLVL True PC9_epitope_Rep4 1068.55637241748 1068.55526993586 56.991 2 0.0638263582024256 0.004359306496612196 0.9438714419765777 ['ENSG00000165355|ENST00000298097|FBXO33'] 6523 11678 APVAEVPTA True PC9_epitope_Rep1 853.4545331178899 853.45342993586 49.797 2 0.06382341229957264 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 134071 14669 WQLQDDKNQSL True PC9_epitope_Rep5 1373.6575430107298 1373.65644993586 61.427 2 0.06380803899949475 0.004359306496612196 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2'] 4806 13670 ALELTGLK True PC9_epitope_Rep3 843.5065686907499 843.50546993586 57.647 2 0.06379308322102441 0.004359306496612196 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 35026 15790 GRAPQVLVL True PC9_epitope_Rep5 951.5865503469499 951.58544993586 65.725 2 0.06379082153011449 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 34842 8871 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 39.477 2 0.0637832127077726 0.004359306496612196 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 32053 6301 GEVPESPEA True H1975_Epitope_Rep2 913.4028914678499 913.40234496793 29.173 1 0.06377135513468052 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 103839 9853 SRIETSNVI True PC9_epitope_Rep5 1017.54547338061 1017.54436993586 42.868 2 0.06377086271212502 0.004359306496612196 0.9438714419765777 ['ENSG00000145623|ENST00000274276|OSMR', 'nc|ENSG00000145623|Q99650-2|OSMR'] 114065 15808 TRPPALLL True PC9_epitope_Rep2 879.5541875895099 879.55308993586 66.066 2 0.06377071545575251 0.004359306496612196 0.9438714419765777 ['ENSG00000090971|ENST00000205194|NAT14'] 34983 10733 GRADGYVL True PC9_epitope_Rep3 849.43446637965 849.43336993586 46.239 2 0.06376880465613051 0.004359306496612196 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 131391 7069 VVSTQTALA True H1975_Epitope_Rep3 888.4916469025999 888.49109496793 32.158 1 0.06376523187451051 0.004359306496612196 0.9438714419765777 ['CON__P02769'] 31341 8480 GEALASISHVA True H1975_Epitope_Rep3 1053.54547338061 1053.54436993586 37.603 2 0.06375928836798582 0.004359306496612196 0.9438714419765777 ['ENSG00000076242|ENST00000231790|MLH1', 'ENST00000539477.5_1_3:37035370-37053334:+|nuORF', 'ENST00000466900.5_1_3:37035370-37047454:+|nuORF'] 644 10222 AATKIINEV True PC9_epitope_Rep1 957.54949613189 957.54838993586 44.2 2 0.06375714772310792 0.004359306496612196 0.9438714419765777 ['GNL3-MANF|1|fusion', 'ENST00000470900.1_1_3:51423580-51426517:+|nuORF', 'ENSG00000145050|ENST00000528157|MANF', 'ENST00000482262.1_1_3:51425158-51426517:+|nuORF', 'ENST00000446668.5_1_3:51424348-51426517:+|nuORF'] 33075 8660 GKFQGFARL True NCI_RA007_Epitope_Rep4 1022.5661492555398 1022.56504993586 40.093 2 0.06375077358488827 0.004359306496612196 0.9438714419765777 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1'] 70878 7494 MEGPTPVSA True H1975_Epitope_Rep3 887.4058686733099 887.40476993586 33.808 2 0.06373976273619812 0.004359306496612196 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 974 7914 AEAATAFGA True H1975_Epitope_Rep2 807.3762827971899 807.37573496793 35.389 1 0.06373963775121616 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000124535|Q96S55-2|WRNIP1', 'ENSG00000124535|ENST00000380773|WRNIP1'] 31504 6145 GEEQPPQPP True H1975_Epitope_Rep3 977.4454249861699 977.44432993586 28.647 2 0.06373110187186096 0.004359306496612196 0.9438714419765777 ['ENST00000566637.5_1_16:88776385-88780917:+|nuORF', 'nc|ENSG00000174177|Q2VPK5-3|CTU2', 'nc|ENSG00000174177|Q2VPK5-5|CTU2', 'ENSG00000174177|ENST00000453996|CTU2'] 132438 10286 VYNPVRAEW True NCI_RA007_Epitope_Rep3 1132.5665431783598 1132.5654499358602 47.531 2 0.06372998739111722 0.004359306496612196 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6'] 26719 18116 FLDGIYVSEK True PC9_epitope_Rep5 1169.59684024713 1169.59574993586 74.694 2 0.06371565872223596 0.004359306496612196 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000475906.1_1_14:35732014-35732239:+|nuORF', 'ENST00000464118.2_1_19:30447279-30447516:-|nuORF'] 16290 6491 EEILAQAK True PC9_epitope_Rep5 900.4916469026 900.49054993586 29.939 2 0.06370057087014576 0.004359306496612196 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 127085 2637 VQAINVSSR True PC9_epitope_Rep2 972.53524305008 972.53414993586 14.795 2 0.06369257800679386 0.004359306496612196 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2'] 108918 7994 TESSWHEIAA True H1975_Epitope_Rep2 1129.50400249145 1129.50290993586 35.698 2 0.06366512360210705 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 45327 7919 ISDAPAPAY True H1975_Epitope_Rep1 903.43379767331 903.43324496793 35.411 1 0.06366484685906021 0.004359306496612196 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 4107 10694 AHSVQPLSL True PC9_epitope_Rep6 950.51853035678 950.51742993586 51.947 2 0.06366346236350488 0.004359306496612196 0.9438714419765777 ['ENSG00000013563|ENST00000369807|DNASE1L1'] 109498 6847 THAAALSV True PC9_epitope_Rep5 768.41300265908 768.41190993586 31.307 2 0.06364589942622426 0.004359306496612196 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 95571 5515 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 26.604 2 0.06363754185890533 0.004359306496612196 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 140515 16146 YYITGNLETF True NCI_RA007_Epitope_Rep5 1219.57610480255 1219.5750099358602 68.84 2 0.06363501238790473 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 32697 8229 GHSEAVISV True PC9_epitope_Rep4 897.45559574705 897.45448993586 39.115 2 0.0636056747092808 0.004359306496612196 0.9438714419765777 ['ENSG00000073536|ENST00000442241|NLE1', 'ENST00000593176.1_1_17:33464206-33469153:-|nuORF'] 46884 15943 IVIDPKNPL True PC9_epitope_Rep2 1007.60153170475 1007.60042993586 66.573 2 0.06359055357683027 0.004359306496612196 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 32126 14391 GEYSFKIFP True NCI_RA007_Epitope_Rep4 1086.53859709502 1086.53750993586 62.664 2 0.06358295265778141 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 58288 10700 LETGEVIPP True H1975_Epitope_Rep2 953.50696261357 953.50641496793 46.183 1 0.06357963352472949 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000165264|O95139-2|NDUFB6', 'ENSG00000165264|ENST00000379847|NDUFB6'] 84127 4992 QEQLRPQTP True H1975_Epitope_Rep3 1095.56727145435 1095.5661699358602 24.331 2 0.0635766146224875 0.004359306496612196 0.9438714419765777 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3'] 49379 11299 KIIEENITSA True PC9_epitope_Rep5 1116.6026539035602 1116.60154993586 48.455 2 0.06356609747944333 0.004359306496612196 0.9438714419765777 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 104297 13215 SSEITSLYY True H1975_Epitope_Rep2 1061.49170647225 1061.49117496793 55.959 1 0.06356421589390555 0.004359306496612196 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENSG00000149256|ENST00000278550|TENM4', 'nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1'] 66817 19381 LSVPGLVSV True PC9_epitope_Rep6 869.52221875489 869.52112993586 87.201 2 0.06355346945984044 0.004359306496612196 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 84552 9127 QHAVGIVV True PC9_epitope_Rep4 821.47593726881 821.47484993586 42.693 2 0.06355169434824903 0.004359306496612196 0.9438714419765777 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 1157 12923 AEASMVIAV True H1975_Epitope_Rep2 889.45790424617 889.4573549679301 54.822 1 0.06354902480211873 0.004359306496612196 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF', 'ENST00000545930.5_1_11:61091835-61095006:-|nuORF'] 5195 20751 ALPPVLTTV True PC9_epitope_Rep2 909.55351888317 909.55242993586 85.26 2 0.063541997914921 0.004359306496612196 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 75355 6661 NQDDLTHKL True PC9_epitope_Rep1 1082.5356369729002 1082.53452993586 30.426 2 0.06353538273835514 0.004359306496612196 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 106652 18321 SYADQMFLL True NCI_RA007_Epitope_Rep3 1086.50558271458 1086.5044899358602 80.226 2 0.06352339376765034 0.004359306496612196 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 113708 11653 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 49.841 2 0.06352283430403684 0.004359306496612196 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 29571 18990 FVINVVNRL True PC9_epitope_Rep4 1072.6393141958 1072.63820993586 81.137 2 0.063519582397796 0.004359306496612196 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 1513 10616 AEEPVFAAA True H1975_Epitope_Rep2 903.4337976733099 903.43270993586 45.857 2 0.06351017402657153 0.004359306496612196 0.9438714419765777 ['ENST00000367833.6_1_1:168148199-168148316:+|nuORF'] 78193 8720 PAPPPPPPP True PC9_epitope_Rep3 865.46978925921 865.46868993586 38.494 2 0.06350816280843365 0.004359306496612196 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 63839 12761 LPTKDLLSA True PC9_epitope_Rep4 956.5542471591599 956.55314993586 56.948 2 0.06348179777097492 0.004359306496612196 0.9438714419765777 ['ENSG00000168014|ENST00000334126|C2CD3', 'nc|ENSG00000168014|Q4AC94-2|C2CD3', 'nc|ENSG00000168014|Q4AC94-4|C2CD3', 'nc|ENSG00000168014|Q4AC94-1|C2CD3', 'nc|ENSG00000168014|Q4AC94-3|C2CD3', 'C2CD3|p.I477*|1|0.37|ENSG00000168014|chr11:74118319-74118319|T/-|frameshift_variant', 'ENST00000415191.6_1_11:73824618-73881837:-|nuORF', 'C2CD3|p.V1068Sfs*6|1|0.26|ENSG00000168014|chr11:74093961-74093962|AG/-|frameshift_variant'] 120273 16994 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 70.527 2 0.0634772257997674 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 26390 8738 FIISRPTKL True H1975_Epitope_Rep3 1073.65971528721 1073.65860993586 38.614 2 0.06347668118482724 0.004359306496612196 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 29422 24160 FVFPGELLL True PC9_epitope_Rep5 1033.5848190114498 1033.58427496793 97.917 1 0.06346767118958137 0.004359306496612196 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 48473 5478 KEERPPELP True H1975_Epitope_Rep2 1093.5767735088898 1093.57566993586 26.088 2 0.0634551219576268 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 9726 15141 AYIQEFQEF True NCI_RA007_Epitope_Rep3 1173.5342399905699 1173.5331499358601 67.068 2 0.06342562281886575 0.004359306496612196 0.9438714419765777 ['ENST00000528308.1_1_11:7507082-7509735:+|nuORF', 'ENSG00000183801|ENST00000329293|OLFML1'] 30729 16431 GANAILGVSL True NCI_RA007_Epitope_Rep2 913.5232813840499 913.5227349679301 68.641 1 0.06341976583097854 0.004359306496612196 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 54449 18520 KYVENFGLI True PC9_epitope_Rep4 1081.5807962601698 1081.5796899358602 79.31 2 0.06341329155243455 0.004359306496612196 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2', 'ENST00000561636.2_1_15:43423309-43423531:+|nuORF'] 108843 9702 TEQYPQGLGP True H1975_Epitope_Rep2 1088.5138388991597 1088.51274993586 42.302 2 0.0634117009838734 0.004359306496612196 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'ENST00000591718.1_1_19:55966993-55972941:-|nuORF'] 23616 22766 EYFESPFTI True PC9_epitope_Rep3 1131.5124419168299 1131.5113499358602 92.838 2 0.06340742302812125 0.004359306496612196 0.9438714419765777 ['ENSG00000198938|ENST00000362079|MT-CO3'] 6950 18583 AQLSEGSITL True PC9_epitope_Rep1 1017.53423999057 1017.53314993586 76.267 2 0.0634067462863745 0.004359306496612196 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'CEP192|p.S1464Ffs*9|1|0.11|ENSG00000101639|chr18:13059212-13059213|-/T|frameshift_variant', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF', 'CEP192|p.Q1109Efs*2|1|0.12|ENSG00000101639|chr18:13055915-13055916|CA/-|frameshift_variant'] 71423 23523 MIPLLLAAL True PC9_epitope_Rep4 953.5983609006099 953.59781496793 98.786 1 0.0633927348845285 0.004359306496612196 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 8178 7382 ATGDVALLR True NCI_RA007_Epitope_Rep3 914.5185303567799 914.51742993586 36.164 2 0.06339013727337868 0.004359306496612196 0.9438714419765777 ['ENSG00000100605|ENST00000267615|ITPK1'] 29084 20076 FTQDSNYLL True PC9_epitope_Rep5 1099.51858992643 1099.51748993586 82.275 2 0.06338212867902966 0.004359306496612196 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 108959 7690 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46908993586 34.545 2 0.06338039899952305 0.004359306496612196 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 120317 16425 VFPEKGYSF True PC9_epitope_Rep3 1072.5229470308798 1072.52184993586 68.315 2 0.06337390181875398 0.004359306496612196 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 1419 7539 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40194496793 33.95 1 0.0633645550322971 0.004359306496612196 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 2647 13356 AESVQAFVV True H1975_Epitope_Rep2 948.4916469025998 948.49054993586 56.506 2 0.06335586350024211 0.00437060766346321 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 120280 15562 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 67.78 2 0.06335182919564504 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 35929 19507 GVAPGFQVV True PC9_epitope_Rep1 872.4756029156399 872.4745099358599 79.852 2 0.06335133097863238 0.00437060766346321 0.9438714419765777 ['ENSG00000165724|ENST00000298585|ZMYND19'] 41437 19139 IAVERVISV True PC9_epitope_Rep4 984.59678067748 984.59568993586 81.713 2 0.06334099390402376 0.00437060766346321 0.9438714419765777 ['ENSG00000250423|ENST00000691062|KIAA1210', 'nc|ENSG00000250423|Q9ULL0|KIAA1210'] 102410 15816 SPVVPQISA True PC9_epitope_Rep2 896.4967322830399 896.49562993586 66.097 2 0.06334038409544572 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 17052 9509 EGPEVDVNLPK True H1975_Epitope_Rep3 1195.6084675599898 1195.60736993586 41.581 2 0.0633384953701824 0.00437060766346321 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 47899 19185 IYVHDLLTF True PC9_epitope_Rep6 1119.59644632431 1119.5953499358602 86.447 2 0.06333714818644298 0.00437060766346321 0.9438714419765777 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000570062.1_1_15:42476637-42483338:-|nuORF'] 87617 8716 QTVAVGVIK True PC9_epitope_Rep2 913.5596668927699 913.55856993586 38.887 2 0.06333411291071947 0.00437060766346321 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 136192 18386 YGLDYVHNL True PC9_epitope_Rep2 1092.52400966004 1092.52290993586 76.052 2 0.06332205805615859 0.00437060766346321 0.9438714419765777 ['ENSG00000212907|ENST00000361335|MT-ND4L'] 72491 15674 MVAPAVASV True PC9_epitope_Rep1 843.4524249429099 843.45187496793 65.112 1 0.06331999574280989 0.00437060766346321 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 46733 13651 IVAPGKGILAA True PC9_epitope_Rep2 1008.6331661861998 1008.63206993586 57.801 2 0.06331981795578609 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 134917 9654 YADVGGKQF True PC9_epitope_Rep3 983.47124581119 983.47014993586 42.082 2 0.06331758196085517 0.00437060766346321 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 113763 5893 TRDPQFQKL True PC9_epitope_Rep4 1131.6036569630699 1131.6020249037902 29.566 3 0.0633086112730919 0.00437060766346321 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 28451 13879 FSENERLI True PC9_epitope_Rep3 1006.5083595959 1006.50726993586 58.466 2 0.06330769052001575 0.00437060766346321 0.9438714419765777 ['ENST00000502732.5_1_1:179076600-179076849:-|nuORF'] 2612 7386 AESLQPVAA True NCI_RA007_Epitope_Rep3 884.4603467743199 884.4597949679301 36.181 1 0.06330313440595152 0.00437060766346321 0.9438714419765777 ['ENSG00000038219|ENST00000040738|BOD1L1'] 85546 21654 QLLDLDPEV True PC9_epitope_Rep1 1040.5389910178399 1040.53847496793 88.12 1 0.06329573679475997 0.00437060766346321 0.9438714419765777 ['ENSG00000113384|ENST00000265070|GOLPH3'] 34558 19605 GQFGVGFYSA True PC9_epitope_Rep4 1031.4712458111896 1031.4706749679299 83.536 1 0.06328078639647541 0.00437060766346321 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 113113 12156 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.4752299358599 51.622 2 0.06327706421518217 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 987 6915 AEAEAGVAV True H1975_Epitope_Rep3 815.4024975450299 815.40194496793 31.558 1 0.06325537560029346 0.00437060766346321 0.9438714419765777 ['ENSG00000178685|ENST00000313028|PARP10', 'ENST00000528580.1_1_8:145060208-145060527:-|nuORF'] 42251 7115 IEHISVSP True H1975_Epitope_Rep3 880.46543215476 880.46432993586 32.338 2 0.06325494784739975 0.00437060766346321 0.9438714419765777 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF', 'ENST00000498365.1_1_2:190327217-190328592:+|nuORF'] 132721 21615 VYSGGVYLF True PC9_epitope_Rep2 1003.5014833103099 1003.50038993586 88.616 2 0.06324486616651982 0.00437060766346321 0.9438714419765777 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 106011 19305 SVLNELPSA True PC9_epitope_Rep1 928.48656152216 928.48601496793 79.062 1 0.06323541839132038 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000167608|Q7Z404|TMC4', 'TMC4|p.V56Cfs*94|1|0.22|ENSG00000167608|chr19:54172015-54172015|C/-|frameshift_variant', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 5861 7690 APGLPTARA True PC9_epitope_Rep5 852.4817509252399 852.48064993586 34.523 2 0.06322491135119986 0.00437060766346321 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 6213 15778 APRDAYWIA True PC9_epitope_Rep5 1061.52942939365 1061.52832993586 65.683 2 0.06322240252702911 0.00437060766346321 0.9438714419765777 ['ENSG00000151465|ENST00000281141|CDC123'] 116188 14069 TVTNAVVTV True PC9_epitope_Rep1 902.50729696674 902.50618993586 58.952 2 0.06321828573044046 0.00437060766346321 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 38856 11677 HIGDAVVI True PC9_epitope_Rep6 822.4599528515 822.45884993586 56.044 2 0.06321482759162612 0.00437060766346321 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 105390 10346 SVADTVARV True PC9_epitope_Rep1 916.4977949121999 916.49668993586 44.677 2 0.06320791636530577 0.00437060766346321 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 138937 13988 YSEGESLFY True H1975_Epitope_Rep1 1093.46040634397 1093.4598749679299 58.963 1 0.06320663503777195 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 63578 22980 LPLLIAPALAA True PC9_epitope_Rep2 1061.68486740589 1061.68376993586 93.888 2 0.06319676361718624 0.00437060766346321 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 77623 9835 NYVKKFQSF True PC9_epitope_Rep2 1159.6025943339098 1159.60093490379 43.166 3 0.06319360679520825 0.00437060766346321 0.9438714419765777 ['ENSG00000109536|ENST00000226798|FRG1', 'ENST00000278882.8_1_20:29623179-29633907:+|nuORF'] 106546 10336 SVVTGGVQSV True PC9_epitope_Rep6 931.49746055903 931.49636993586 50.46 2 0.06318803172809948 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 7466 7696 ASDPGTATF True H1975_Epitope_Rep2 865.38176210045 865.3812149679301 34.557 1 0.06317808984913789 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000008441|Q14938-6|NFIX', 'nc|ENSG00000008441|Q14938-5|NFIX', 'nc|ENSG00000008441|Q14938-3|NFIX'] 90974 22836 RLIALLEVL True PC9_epitope_Rep5 1038.68011637862 1038.6790099358602 92.834 2 0.06317702000839123 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 23956 18778 EYNSDLHQFF True PC9_epitope_Rep4 1298.5567663402996 1298.5556699358601 80.313 2 0.06316390138870939 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 74243 14781 NIDPITMAY True H1975_Epitope_Rep3 1036.48993265044 1036.4888299358602 62.234 2 0.06316226479656256 0.00437060766346321 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 48365 8379 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54861496793 37.182 1 0.06316130320925617 0.00437060766346321 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 75805 19438 NRDDIGIIL True PC9_epitope_Rep1 1027.56620882519 1027.5651099358602 79.582 2 0.06315623845324489 0.00437060766346321 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 82500 9342 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 40.896 1 0.06313861296914916 0.00437060766346321 0.9438714419765777 ['ENSG00000168143|ENST00000306858|FAM83B', 'FAM83B|p.M1000Ifs*12|1|0.2|ENSG00000168143|chr6:54941969-54941970|-/T|frameshift_variant', 'FAM83B|p.K141Rfs*2|1|0.3|ENSG00000168143|chr6:54870665-54870665|G/-|frameshift_variant'] 129143 10983 VTDDALVY True H1975_Epitope_Rep2 894.4334633201399 894.43236993586 47.272 2 0.06313751077883961 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 9391 16761 AVVGGVVAV True PC9_epitope_Rep1 769.4697892592098 769.4692449679301 69.296 1 0.06312781552434633 0.00437060766346321 0.9438714419765777 ['ENSG00000165948|ENST00000555523|IFI27L1'] 47814 15640 IYSEVATLI True NCI_RA007_Epitope_Rep4 1007.55391280599 1007.55280993586 67.935 2 0.06312763236373405 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000078674|Q15154-2|PCM1', 'ENSG00000078674|ENST00000325083|PCM1', 'nc|ENSG00000078674|Q15154-4|PCM1', 'nc|ENSG00000078674|Q15154-5|PCM1'] 69268 18794 LVPDVVNEV True PC9_epitope_Rep4 982.53351171458 982.5329649679301 80.377 1 0.0631105456769832 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 2814 12322 AEVFPPPVA True H1975_Epitope_Rep2 925.4909186266098 925.49037496793 52.481 1 0.06309899719648424 0.00437060766346321 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 105421 19516 SVAGGFVGL True PC9_epitope_Rep4 805.4334037504899 805.4328549679301 83.187 1 0.06309347239817012 0.00437060766346321 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6', 'SLC6A6|p.L206Cfs*11|1|0.18|ENSG00000131389|chr3:14457966-14457966|T/-|frameshift_variant'] 24261 18936 FAADIISVL True H1975_Epitope_Rep2 947.53278343859 947.5322349679301 78.605 1 0.06307370831383415 0.00437060766346321 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 89582 3460 RESKVVVPP True NCI_RA007_Epitope_Rep3 1009.5920296502098 1009.59092993586 19.29 2 0.06307106557420186 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 65151 14627 LSDSFSDLY True H1975_Epitope_Rep3 1045.46040634397 1045.4593099358601 61.631 2 0.06306561509466525 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-3|NDC1'] 2489 15550 AEQPWPPLP True H1975_Epitope_Rep2 1033.5232813840498 1033.52218993586 64.969 2 0.06304953205556882 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 109869 17028 THMSPSWTL True PC9_epitope_Rep5 1058.4855159763401 1058.4844099358602 70.516 2 0.06303761788993838 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000128513|Q9NUX5-2|POT1', 'ENSG00000128513|ENST00000357628|POT1'] 87057 7105 QSDVIHQSVY True H1975_Epitope_Rep2 1174.56185172074 1174.56074993586 32.259 2 0.06303739580888447 0.00437060766346321 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 97814 14015 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.4914349679301 58.99 1 0.06303592308737242 0.00437060766346321 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 89112 4612 REFEERHIP True H1975_Epitope_Rep3 1211.6047195922297 1211.60308490379 22.862 3 0.06302865756776385 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 87420 14805 QTEDNMLFY True H1975_Epitope_Rep1 1159.4855755459898 1159.48446993586 62.174 2 0.06302817406151659 0.00437060766346321 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 83670 9006 QEAISVVA True H1975_Epitope_Rep2 815.4388830537499 815.43833496793 39.594 1 0.06300074300535306 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B'] 109970 10792 THSLTTPVV True PC9_epitope_Rep3 953.51819600361 953.51708993586 46.475 2 0.06300046499472411 0.00437060766346321 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 17752 12151 EHTPSALAI True PC9_epitope_Rep5 937.4868958753299 937.48578993586 51.728 2 0.06299530733420133 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000566146.1_1_16:30080209-30080764:+|nuORF'] 47572 5409 IYNEIAGK True NCI_RA007_Epitope_Rep4 906.4810822188999 906.47998993586 27.377 2 0.06299337816311056 0.00437060766346321 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 135172 6398 YASSANLHLPK True NCI_RA007_Epitope_Rep5 1199.62987171091 1199.62822490379 31.281 3 0.0629852326035142 0.00437060766346321 0.9438714419765777 ['CON__P34955'] 42770 23451 IFGVIIDTF True PC9_epitope_Rep2 1023.56408356687 1023.56298993586 95.675 2 0.06297941968270697 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENST00000493491.5_1_3:4841632-4887906:+|nuORF', 'ENSG00000123104|ENST00000381340|ITPR2', 'ENSG00000096433|ENST00000605930|ITPR3'] 2815 12431 AEVFPPPVA True H1975_Epitope_Rep2 925.4909186266098 925.49037496793 52.902 1 0.06296193812943074 0.00437060766346321 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 130448 17059 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 70.77 2 0.06296088663050887 0.00437060766346321 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 111761 11216 TLQLDNNFEVK True NCI_RA007_Epitope_Rep2 1319.6721304457103 1319.6710299358601 48.213 2 0.06295963447335166 0.00437060766346321 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 46802 17052 IVDNTTMQL True PC9_epitope_Rep3 1033.51139637101 1033.51028993586 70.744 2 0.0629468469211221 0.00437060766346321 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 119646 7876 VESGVPQPP True H1975_Epitope_Rep1 908.4603467743198 908.45924993586 35.245 2 0.06293437683780993 0.00437060766346321 0.9438714419765777 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 102217 11700 SPSPPSVAV True PC9_epitope_Rep4 839.4388830537499 839.43778993586 52.766 2 0.062927050149752 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'COP1|p.T329Qfs*25|1|0.31|ENSG00000143207|chr1:176116666-176116666|G/-|frameshift_variant', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 35055 7301 GRFADSHEL True PC9_epitope_Rep1 1030.4832074772198 1030.48210993586 32.896 2 0.06291711069612682 0.00437060766346321 0.9438714419765777 ['ENSG00000121680|ENST00000378750|PEX16', 'nc|ENSG00000121680|Q9Y5Y5-2|PEX16'] 53178 8821 KSTLINSL True NCI_RA007_Epitope_Rep4 874.51238234718 874.51128993586 40.741 2 0.06291703391108958 0.00437060766346321 0.9438714419765777 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000473201.1_1_7:35903172-35913395:+|nuORF', 'ENST00000475109.5_1_7:35903172-35919218:+|nuORF', 'ENST00000494824.5_1_2:242255375-242275396:+|nuORF', 'ENST00000484740.1_1_2:242255375-242274650:+|nuORF', 'ENST00000563743.1_1_16:30393079-30393866:-|nuORF', 'ENST00000366210.2_1_2:242263647-242276275:+|nuORF', 'nc|ENSG00000180096|Q8WYJ6-2|SEPTIN1', 'ENST00000563957.6_1_16:30392598-30394125:-|nuORF', 'ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000467971.5_1_2:242255375-242276932:+|nuORF', 'ENSG00000180096|ENST00000321367|SEPTIN1'] 131633 13049 VWDTAGQEKF True PC9_epitope_Rep2 1179.5560380643099 1179.5549499358601 55.472 2 0.06291379114656853 0.00437060766346321 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000537745.5_1_12:131357552-131357684:+|nuORF'] 94820 18952 RYLTVAAVF True PC9_epitope_Rep4 1038.5862159937797 1038.5851099358601 80.986 2 0.06291051256853675 0.00437060766346321 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 42566 10804 IESPPAFTA True H1975_Epitope_Rep1 931.46509780159 931.46400993586 46.521 2 0.06290861424361426 0.00437060766346321 0.9438714419765777 ['ENSG00000152382|ENST00000367874|TADA1'] 70606 20843 MAAAWPLLL True H1975_Epitope_Rep1 984.5466596809199 984.54556993586 86.616 2 0.06290387347083765 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 106089 5960 SVMRPEQIMK True NCI_RA007_Epitope_Rep3 1217.6260492837698 1217.62441490379 30.424 3 0.06289637045568174 0.00437060766346321 0.9438714419765777 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 113076 22380 TPYGYFLISA True PC9_epitope_Rep3 1130.5648118428599 1130.56370993586 91.362 2 0.06289099012381283 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 138399 5979 YRDPTTVTT True PC9_epitope_Rep2 1052.51383889916 1052.51274993586 28.384 2 0.06288800948423147 0.00437060766346321 0.9438714419765777 ['ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A'] 130018 20987 VTPPGFQLV True PC9_epitope_Rep3 956.53311779176 956.53202993586 86.003 2 0.06288293877876544 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 64622 13554 LREPLPATL True PC9_epitope_Rep6 1008.59678067748 1008.59568993586 63.867 2 0.06287118258090953 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'NSUN2|p.R248Sfs*4|1|0.25|ENSG00000037474|chr5:6620177-6620177|C/-|frameshift_variant'] 4457 6125 AKDPFAHLPK True NCI_RA007_Epitope_Rep4 1122.6185787512197 1122.61693490379 30.172 3 0.06287112483682536 0.00437060766346321 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'ENST00000434365.1_1_X:114937583-114938135:+|nuORF'] 24422 4050 FAGDDAPR True NCI_RA007_Epitope_Rep2 847.38243080679 847.38132993586 20.392 2 0.06286430134425451 0.00437060766346321 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 89052 9692 REEFPTLQA True H1975_Epitope_Rep3 1089.5454733806098 1089.54436993586 42.301 2 0.06285880553239656 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 47609 20381 IYPATIASI True PC9_epitope_Rep3 947.53278343859 947.53168993586 83.646 2 0.06285191134968189 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000205571|Q16637-4|SMN1', 'nc|ENSG00000205571|Q16637-2|SMN1', 'nc|ENSG00000205571|Q16637-3|SMN1', 'ENSG00000205571|ENST00000380743|SMN2', 'ENSG00000172062|ENST00000380707|SMN1'] 132859 12675 VYTSGIYNI True NCI_RA007_Epitope_Rep3 1028.51786165044 1028.51727496793 57.101 1 0.06284489984624764 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1'] 17266 10459 EHAVGYAL True PC9_epitope_Rep5 858.42356734278 858.42246993586 45.217 2 0.06283699865528171 0.00437060766346321 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000494697.5_1_20:2633306-2634895:+|nuORF', 'ENST00000470143.1_1_20:2633306-2634188:+|nuORF'] 17290 16484 EHDGSLFQAV True PC9_epitope_Rep3 1101.50908787189 1101.50798993586 68.542 2 0.06281682415752438 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 42786 16867 IFIDPGYQTF True NCI_RA007_Epitope_Rep5 1199.58627556343 1199.5851699358602 71.632 2 0.0628131007928292 0.00437060766346321 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 2662 7039 AETAAVTVAA True H1975_Epitope_Rep1 902.4709114580199 902.4703649679301 32.108 1 0.06280788676620268 0.00437060766346321 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 88075 15913 QVVGKLIEV True PC9_epitope_Rep1 983.6015317047498 983.60042993586 66.02 2 0.06279961266508409 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 17230 13572 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 63.942 2 0.0627975301471691 0.00437060766346321 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 94403 13973 RYFDPANGKF True PC9_epitope_Rep3 1213.5880068989297 1213.58635490379 58.82 3 0.06279633445677103 0.00437060766346321 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 2682 11691 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.47964993586 50.044 2 0.06279132335915118 0.00437060766346321 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 26242 20546 FHYIFNVQL True PC9_epitope_Rep4 1179.6076797143498 1179.60658993586 87.181 2 0.06279034787961581 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3', 'ENST00000488104.1_1_10:111879082-111879346:+|nuORF'] 8680 21937 AVDAFFTAV True PC9_epitope_Rep1 939.4701831820299 939.46908993586 89.198 2 0.0627835842815469 0.00437060766346321 0.9438714419765777 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 36304 4857 GVGPVPARA True PC9_epitope_Rep6 822.47118624154 822.47008993586 26.204 2 0.06277334573600948 0.00437060766346321 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 95709 7290 SAYQHPASF True PC9_epitope_Rep4 1006.4508447197799 1006.44974993586 35.355 2 0.06276121751237608 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 109972 10594 THSLTTPVV True PC9_epitope_Rep5 953.51819600361 953.51708993586 45.738 2 0.06274666738201291 0.00437060766346321 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 130672 13568 VVDAVVTQV True PC9_epitope_Rep6 928.5229470308799 928.52184993586 63.925 2 0.0627291463539968 0.00437060766346321 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF'] 34734 4687 GQNPTNAEVLK True NCI_RA007_Epitope_Rep3 1169.6040508858898 1169.6029499358601 25.382 2 0.06272137693667776 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56552185-56553955:+|nuORF', 'ENST00000547703.5_1_12:56552185-56553570:+|nuORF', 'ENST00000546630.1_1_12:56552185-56553570:+|nuORF', 'ENST00000549178.5_1_12:56548807-56551507:+|nuORF', 'ENST00000550152.5_1_12:56547702-56549709:+|nuORF', 'ENSG00000196465|ENST00000695999|MYL6B', 'ENST00000405661.8_1_12:56547702-56549525:+|nuORF'] 48494 7630 KEFIKIVEA True NCI_RA007_Epitope_Rep3 1075.62774645259 1075.62664993586 37.141 2 0.06268719843830813 0.00437060766346321 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 94669 7743 RYLEKPMEI True NCI_RA007_Epitope_Rep5 1177.6165301458898 1177.6154299358602 36.481 2 0.06268184613643032 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 13999 8019 DRTAIHEVM True PC9_epitope_Rep5 1070.51787873378 1070.51678993586 35.783 2 0.06267134813486631 0.00437060766346321 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'ENST00000476448.1_1_6:52141011-52144220:-|nuORF'] 1184 7646 AEDDLNTVA True H1975_Epitope_Rep3 946.42435518842 946.42324993586 34.392 2 0.06267106232517713 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 98500 20543 SILETVTAV True PC9_epitope_Rep2 931.52261267771 931.52150993586 84.451 2 0.06266543784525612 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 102358 5203 SPVFTSRSAA True PC9_epitope_Rep6 1021.51925863277 1021.51816993586 27.774 2 0.06265665944114844 0.00437060766346321 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 94517 17682 RYIDRIHIF True PC9_epitope_Rep5 1231.68257599011 1231.68094490379 73.028 3 0.06265297519758727 0.00437060766346321 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 7185 16352 ARDETEFYL True PC9_epitope_Rep2 1142.5244035828598 1142.52387496793 68.143 1 0.06264834387284733 0.00437060766346321 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 83317 13504 QALLDLHAL True NCI_RA007_Epitope_Rep3 992.5654805492001 992.56438993586 60.408 2 0.06263435555308947 0.00437060766346321 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 75806 19444 NRDDIGIIL True PC9_epitope_Rep3 1027.56620882519 1027.5651099358602 80.017 2 0.06263183444431089 0.00437060766346321 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 9644 18795 AYGHFSYEF True PC9_epitope_Rep3 1119.46616043075 1119.4650699358601 77.519 2 0.06263064754105462 0.00437060766346321 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 129067 20202 VTAPSGILDV True PC9_epitope_Rep2 970.53351171458 970.53240993586 83.122 2 0.06261711073018802 0.00437060766346321 0.9438714419765777 ['ENSG00000162063|ENST00000397066|CCNF'] 47186 15408 IYADNQVMHF True PC9_epitope_Rep6 1236.55974354576 1236.55864993586 71.422 2 0.06260093536503791 0.00437060766346321 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 94821 20175 RYLTVAAVF True PC9_epitope_Rep5 1038.5862159937797 1038.5851099358601 82.651 2 0.0625861817480047 0.00437060766346321 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 6526 11714 APVAEVPTA True PC9_epitope_Rep3 853.4545331178899 853.45342993586 50.076 2 0.06256960269279856 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 103463 4490 SRAPDGAAL True PC9_epitope_Rep4 856.4402800360799 856.43918993586 23.741 2 0.06254899037591113 0.00437060766346321 0.9438714419765777 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 101603 9600 SPFAEGTSA True PC9_epitope_Rep5 865.38176210045 865.3806699358599 41.888 2 0.06253799749282292 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 52845 6093 KQYAGKYVL True NCI_RA007_Epitope_Rep4 1068.59678067748 1068.59568993586 30.052 2 0.06252954911243981 0.00437060766346321 0.9438714419765777 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 5628 21535 APAELLAALPA True PC9_epitope_Rep3 1035.5964463243097 1035.5953499358602 88.131 2 0.06252912974419467 0.00437060766346321 0.9438714419765777 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 89051 9879 REEFPTLQA True H1975_Epitope_Rep2 1089.5454733806098 1089.54487496793 42.987 1 0.06250400915097118 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 38718 6958 HHSNLIAGM True PC9_epitope_Rep6 978.47053461854 978.46942993586 35.715 2 0.06247097012555592 0.00437060766346321 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 103413 19578 SQYGEIVNI True PC9_epitope_Rep2 1021.5080252427299 1021.5074749679301 80.688 1 0.06246412573969268 0.00437060766346321 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 132788 17745 VYSQIPAAVKL True PC9_epitope_Rep1 1187.6914093383098 1187.6903099358601 73.054 2 0.062463688502441654 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 138953 10019 YSELAEGAAY True H1975_Epitope_Rep2 1072.4713053808398 1072.47020993586 43.529 2 0.06246147687418183 0.00437060766346321 0.9438714419765777 ['ENSG00000198933|ENST00000578982|TBKBP1'] 97010 5411 SEVQSTVEA True H1975_Epitope_Rep1 948.4400052525599 948.43890993586 25.87 2 0.06244957199825905 0.00437060766346321 0.9438714419765777 ['ENST00000518940.5_1_8:103855961-103870248:-|nuORF'] 48956 9323 KEYILVEEA True NCI_RA007_Epitope_Rep3 1092.5702911461199 1092.56918993586 43.77 2 0.062449179937931185 0.00437060766346321 0.9438714419765777 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2', 'ENST00000478055.1_1_5:131553347-131562829:-|nuORF'] 135897 9754 YESSTASALVA True NCI_RA007_Epitope_Rep1 1097.52406922969 1097.5229699358601 41.942 2 0.062437333653753965 0.00437060766346321 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 26386 12426 FIIPNVVK True NCI_RA007_Epitope_Rep1 928.57458868092 928.57348993586 52.31 2 0.06243160070360875 0.00437060766346321 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF'] 104047 9858 SRTGEMTVL True PC9_epitope_Rep2 992.49608066004 992.49498993586 43.253 2 0.06240606626777968 0.00437060766346321 0.9438714419765777 ['ENSG00000168495|ENST00000306433|POLR3D'] 137681 21834 YMHGFFMDI True PC9_epitope_Rep1 1159.48307344819 1159.4819699358602 88.794 2 0.06239521636592946 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10'] 30618 7352 GALALEEK True PC9_epitope_Rep5 829.4545331178899 829.45342993586 33.238 2 0.06238170575106505 0.004389880952380952 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 43766 9358 IIYGGSVTG True NCI_RA007_Epitope_Rep1 865.45453311789 865.4539849679301 40.394 1 0.06237946038244908 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 39188 7501 HLGALLAR True PC9_epitope_Rep2 849.51847078713 849.51736993586 34.222 2 0.06237878901299804 0.004389880952380952 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 4540 10570 AKREQEVTV True PC9_epitope_Rep1 1058.5720224816198 1058.57092993586 45.548 2 0.062349093223316346 0.004389880952380952 0.9438714419765777 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 35556 15467 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.51670993586 64.646 2 0.06234231629067334 0.004389880952380952 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 7960 17032 ATDLAYYLV True H1975_Epitope_Rep2 1027.52261267771 1027.52207496793 70.77 1 0.06234165646327313 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL', 'ASL|p.R379L|1|0.21|ENSG00000126522|chr7:66092079-66092079|G/T|missense_variant'] 1027 8537 AEAFGKIVA True H1975_Epitope_Rep3 904.5018176634799 904.50072993586 37.825 2 0.06232250233223734 0.004389880952380952 0.9438714419765777 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 97827 12399 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.4914349679301 55.497 1 0.06231372941472734 0.004389880952380952 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 4333 18598 AINDSFLSA True PC9_epitope_Rep4 936.45526139388 936.45416993586 79.614 2 0.062311774885937275 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 31379 12982 GEAPVPVLP True H1975_Epitope_Rep3 877.4909186266099 877.49037496793 55.17 1 0.062304727625999624 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 26839 17504 FLEPVNPRL True PC9_epitope_Rep1 1083.60767971435 1083.60658993586 72.124 2 0.06230132376190793 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A', 'chr12:56598783-56598942|139|11.99|0.66|4.18|-|0|BAZ2A,None|1'] 39841 7010 HQGGPAVAL True PC9_epitope_Rep4 848.4504507969599 848.44934993586 34.212 2 0.06229051950284442 0.004389880952380952 0.9438714419765777 ['ENSG00000231274|ENST00000612221|SBK3'] 103062 11230 SQLEEGKPGYL True PC9_epitope_Rep2 1219.6084675599898 1219.60736993586 48.524 2 0.06228416743378274 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 106424 11990 SVTQIYHAV True PC9_epitope_Rep1 1016.5290950404799 1016.52798993586 50.982 2 0.06227823950337439 0.004389880952380952 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 35572 15586 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.51670993586 64.961 2 0.06227772969280669 0.004389880952380952 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 127273 18345 VQLDPQTVGV True PC9_epitope_Rep2 1054.56587447202 1054.56476993586 75.894 2 0.062275620700327265 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 7273 9520 ARPPGYEF True PC9_epitope_Rep4 935.45011644379 935.44900993586 44.229 2 0.06227513033721345 0.004389880952380952 0.9438714419765777 ['ENSG00000170604|ENST00000302165|IRF2BP1'] 21207 14729 ERFEKTFQL True PC9_epitope_Rep5 1196.6189726740397 1196.61733490379 61.654 3 0.06227213408831972 0.004389880952380952 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 11945 8197 DHSQAVTL True PC9_epitope_Rep1 869.42429561877 869.42318993586 36.363 2 0.06225901086843795 0.004389880952380952 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 140854 22043 YYTEFPTVL True PC9_epitope_Rep3 1131.54882742555 1131.5477299358602 90.085 2 0.062252465669581404 0.004389880952380952 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 113610 8073 TRATEGMVVA True PC9_epitope_Rep5 1033.5226297610498 1033.5215299358601 35.991 2 0.06224259707438535 0.004389880952380952 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 75029 9111 NM[Oxidation]DNM[Oxidation]FESY True H1975_Epitope_Rep3 1181.40052635357 1181.39942993586 40.035 2 0.062234509200170596 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 26698 14749 FLDDSTALY True H1975_Epitope_Rep2 1043.48114178855 1043.48004993586 61.892 2 0.06222840780390131 0.004389880952380952 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2'] 56751 9334 LEAPGGIAT True H1975_Epitope_Rep2 827.43888305375 827.43833496793 40.864 1 0.06221740054941777 0.004389880952380952 0.9438714419765777 ['ENST00000470452.5_1_2:237994547-238002319:+|nuORF', 'COPS8|p.T92Pfs*50|1|0.31|ENSG00000198612|chr2:237089936-237089936|A/-|frameshift_variant', 'COPS8|p.P192Tfs*13|1|0.67|ENSG00000198612|chr2:237097686-237097697|CCCAATGAACAG/A|frameshift_variant', 'ENSG00000198612|ENST00000354371|COPS8'] 7546 18558 ASFNDTFVHV True PC9_epitope_Rep1 1135.5298233164701 1135.5287299358602 76.171 2 0.062212232184417335 0.004389880952380952 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 32289 18017 GFSLEELR True PC9_epitope_Rep3 949.4868958753299 949.48578993586 74.505 2 0.062211496440110106 0.004389880952380952 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF', 'ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 32723 18912 GHTDIVLAL True PC9_epitope_Rep1 937.5232813840499 937.52218993586 77.53 2 0.06220737017093143 0.004389880952380952 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 71996 12339 MQDKSSYLL True PC9_epitope_Rep2 1083.52704643515 1083.5259499358601 52.773 2 0.062202040757904926 0.004389880952380952 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 113140 16091 TQAPPNVVL True PC9_epitope_Rep5 937.5232813840499 937.52218993586 66.882 2 0.06220188747535848 0.004389880952380952 0.9438714419765777 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 1111 6316 AEAPPPKIP True H1975_Epitope_Rep3 918.51746772762 918.51636993586 29.291 2 0.062196838988330075 0.004389880952380952 0.9438714419765777 ['ENST00000471272.1_1_10:49633986-49635218:+|nuORF', 'nc|ENSG00000107643|P45983-5|MAPK8', 'nc|ENSG00000107643|P45983-3|MAPK8', 'nc|ENSG00000107643|P45983-2|MAPK8', 'nc|ENSG00000107643|P45983-4|MAPK8', 'ENSG00000107643|ENST00000374189|MAPK8'] 113809 19681 TRDVAFLL True PC9_epitope_Rep5 933.5283667644899 933.52726993586 80.757 2 0.062194104119829625 0.004389880952380952 0.9438714419765777 ['ENSG00000164291|ENST00000380009|ARSK'] 88995 3728 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 19.408 2 0.06218524218847175 0.004389880952380952 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 125110 21609 VLPGVDALSNI True PC9_epitope_Rep2 1096.61282466444 1096.61172993586 88.594 2 0.06218087888917222 0.004389880952380952 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 46656 20899 ITVGSLVTV True PC9_epitope_Rep1 887.5327834385901 887.53168993586 85.209 2 0.062177587704766946 0.004389880952380952 0.9438714419765777 ['ENSG00000025796|ENST00000369002|SEC63', 'ENST00000425785.1_1_1:98011504-98011909:+|nuORF'] 88210 13513 QYASAFHFL True NCI_RA007_Epitope_Rep3 1082.51853035678 1082.51742993586 60.442 2 0.06216749386690392 0.004389880952380952 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 57185 7706 LEESSPIA True H1975_Epitope_Rep2 844.4178132559999 844.41726496793 34.595 1 0.06216703555417233 0.004389880952380952 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 132200 7852 VYKDHQTITI True PC9_epitope_Rep2 1216.6451874218799 1216.6435349037902 35.572 3 0.0621627878923126 0.004389880952380952 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 31366 5055 GEAPPSAPP True H1975_Epitope_Rep1 821.3919328613299 821.39082993586 24.516 2 0.06214922144668115 0.004389880952380952 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 47919 18393 IYVTGGHLF True PC9_epitope_Rep5 1005.52836676449 1005.52726993586 75.767 2 0.06214675859880301 0.004389880952380952 0.9438714419765777 ['ENSG00000130487|ENST00000648057|KLHDC7B', 'nc|ENSG00000130487|Q96G42|KLHDC7B'] 1017 8362 AEAEPPSEVV True H1975_Epitope_Rep3 1026.48695544498 1026.4858499358602 37.147 2 0.062146577390961605 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 32447 13929 GGHGPSFPL True PC9_epitope_Rep1 867.42390169595 867.42280993586 58.413 2 0.06214157007700914 0.004389880952380952 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 68814 7683 LVDSNNPKI True PC9_epitope_Rep1 998.53965972418 998.53856993586 34.375 2 0.06214024384685537 0.004389880952380952 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 76904 20168 NVLDHFSEL True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 82.625 2 0.0621312340596313 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 74168 6397 NHYQKQLEI True PC9_epitope_Rep4 1171.5985715826298 1171.59746993586 31.697 2 0.062123352583722875 0.004389880952380952 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 6750 21508 AQEDYLFSV True PC9_epitope_Rep3 1070.49204082542 1070.49094993586 88.025 2 0.06210815779792063 0.004389880952380952 0.9438714419765777 ['ENSG00000171150|ENST00000394861|SOCS5', 'ENSG00000180008|ENST00000555846|SOCS4'] 9340 13629 AVTDKFLSA True PC9_epitope_Rep5 950.5072969667399 950.50618993586 57.446 2 0.062097519324516896 0.004389880952380952 0.9438714419765777 ['ENSG00000140575|ENST00000268182|IQGAP1'] 54080 13004 KYLYVDKNF True PC9_epitope_Rep5 1188.6179100448796 1188.6168099358601 55.028 2 0.062095317138809114 0.004389880952380952 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 38621 19091 HHIYLEGTLL True PC9_epitope_Rep1 1194.6397081186199 1194.6386099358601 78.224 2 0.06207035900254379 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 2226 7791 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.4390649679301 34.951 1 0.06205808110975182 0.004389880952380952 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 35013 9106 GRAPGGLSL True PC9_epitope_Rep6 826.4661008611 826.4650099358599 45.116 2 0.06205807110780458 0.004389880952380952 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 48982 11681 KFDQLLAEEK True PC9_epitope_Rep1 1219.6448530687096 1219.6437499358601 49.808 2 0.06203882228228048 0.004410853673646388 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 98193 13957 SIDSLQLGY True H1975_Epitope_Rep1 994.49712620586 994.49602993586 58.841 2 0.062034902092436554 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 24371 5729 FAEGQGRAL True PC9_epitope_Rep6 947.4824792012298 947.48138993586 30.191 2 0.06202953919349943 0.004410853673646388 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 118163 15182 VAVPLYDTL True NCI_RA007_Epitope_Rep3 989.54334812229 989.54279496793 67.238 1 0.06202911519784866 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 5859 7667 APGLPTARA True PC9_epitope_Rep3 852.4817509252399 852.48064993586 34.49 2 0.06202354911350884 0.004410853673646388 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 96388 4990 SEHPPAVP True H1975_Epitope_Rep3 832.40791727864 832.40682993586 24.323 2 0.06201618378694982 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 107667 19002 TAISLFYEL True NCI_RA007_Epitope_Rep3 1055.5539128059902 1055.55280993586 83.027 2 0.06199523760110219 0.004410853673646388 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 116632 9692 TYIEASGKSL True PC9_epitope_Rep2 1067.54989005471 1067.5487899358602 42.621 2 0.06198944436276484 0.004410853673646388 0.9438714419765777 ['ENST00000590420.1_1_19:11685827-11688432:-|nuORF', 'ENSG00000102575|ENST00000648477|ACP5'] 110057 18190 THYDHVLIEL True PC9_epitope_Rep5 1238.6295373577398 1238.62789490379 74.977 3 0.061981406109122124 0.004410853673646388 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 61733 20880 LLIPGLATA True PC9_epitope_Rep4 867.54295419947 867.54184993586 88.472 2 0.06194305241677439 0.004410853673646388 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 35477 22573 GTFDIFYTA True PC9_epitope_Rep1 1033.4756624852898 1033.47507496793 91.634 1 0.061935380293983044 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 114959 5380 TTIEEDKSVLK True NCI_RA007_Epitope_Rep4 1261.6765471198098 1261.67491490379 27.262 3 0.06193054849421395 0.004410853673646388 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3'] 574 11401 AARLPLDAA True PC9_epitope_Rep3 896.5079656730799 896.50686993586 48.857 2 0.06192397269432358 0.004410853673646388 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 21654 13074 ERTSFNYAM True PC9_epitope_Rep1 1117.4862442523297 1117.4851499358601 55.157 2 0.06190891925324912 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 20682 15709 EQIHTILQV True PC9_epitope_Rep4 1079.59750895347 1079.59640993586 68.351 2 0.06190582807209349 0.004410853673646388 0.9438714419765777 ['ENSG00000163481|ENST00000295704|RNF25', 'ENST00000463188.5_1_2:219529923-219536693:-|nuORF'] 49358 18593 KIFSGVFVKV True PC9_epitope_Rep5 1122.68011637862 1122.67846490379 76.542 3 0.06190523986633703 0.004410853673646388 0.9438714419765777 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 136167 21752 YGIENEVFL True PC9_epitope_Rep2 1082.52842633414 1082.52732993586 89.14 2 0.06190420493915165 0.004410853673646388 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 42583 7883 IESRTLAIA True NCI_RA007_Epitope_Rep1 972.5603951687599 972.55928993586 34.656 2 0.06188631743785166 0.004410853673646388 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 77618 11426 NYVEVTRKW True PC9_epitope_Rep1 1193.61930702721 1193.61766490379 48.828 3 0.06188236995301012 0.004410853673646388 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1'] 103883 21642 SRLGLPLLL True PC9_epitope_Rep3 980.63825156664 980.63714993586 88.545 2 0.06186738263725248 0.004410853673646388 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 80636 18409 PLPPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 75.601 2 0.06183947103205865 0.004410853673646388 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 61244 11758 LLDQRPAWY True H1975_Epitope_Rep2 1160.5978433066398 1160.59674993586 50.303 2 0.06183479553823071 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000179241|Q86YD5-2|LDLRAD3', 'ENSG00000179241|ENST00000315571|LDLRAD3'] 102603 21901 SQAPFIVAL True PC9_epitope_Rep2 944.5331177917599 944.53256496793 89.718 1 0.0618344320551386 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 125123 22127 VLPLRGFLGI True PC9_epitope_Rep1 1083.68045073179 1083.67934993586 89.925 2 0.06183398881331743 0.004410853673646388 0.9438714419765777 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 52257 4945 KNLQTVNVDEN True NCI_RA007_Epitope_Rep5 1272.6309939097198 1272.62988993586 25.722 2 0.061823300276207555 0.004410853673646388 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 46256 9629 ITDVDNGYY True H1975_Epitope_Rep1 1058.4556553167 1058.45454993586 41.966 2 0.06181018816654649 0.004410853673646388 0.9438714419765777 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT', 'ENST00000477340.5_1_20:62339420-62365174:+|nuORF', 'nc|ENSG00000197114|Q8N5A5-3|ZGPAT'] 96877 10332 SESVPVIAA True H1975_Epitope_Rep3 871.46509780159 871.46454496793 44.794 1 0.061807505654122435 0.004410853673646388 0.9438714419765777 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 91261 6471 RLVESKVEL True NCI_RA007_Epitope_Rep5 1071.62880908175 1071.6277099358601 31.556 2 0.061801370267101294 0.004410853673646388 0.9438714419765777 ['ENST00000452767.1_1_10:71914847-71917573:-|nuORF', 'nc|ENSG00000079332|Q9NR31-2|SAR1A', 'ENSG00000079332|ENST00000373241|SAR1A'] 48651 6689 KELAETIAA True H1975_Epitope_Rep3 944.5178616504398 944.51676993586 30.684 2 0.061787834548657154 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 105019 5792 STIKEVAQA True PC9_epitope_Rep1 945.5131106231698 945.51200993586 27.096 2 0.06178568430233096 0.004410853673646388 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 7422 16550 ASAVIGLLY True H1975_Epitope_Rep2 905.52221875489 905.52167496793 68.884 1 0.061771531414203544 0.004410853673646388 0.9438714419765777 ['ENSG00000125629|ENST00000245787|INSIG2'] 24716 13061 FAVPENSSV True PC9_epitope_Rep6 948.4552613938799 948.45416993586 61.845 2 0.06176220899004894 0.004410853673646388 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 101147 7854 SLVNLGGSK True PC9_epitope_Rep6 873.4919812557699 873.49088993586 39.61 2 0.06175690860403178 0.004410853673646388 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 132768 15211 VYSPHVLNL True PC9_epitope_Rep6 1040.5654805492 1040.5643899358602 70.605 2 0.0617499054656393 0.004410853673646388 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 120026 16988 VFDVALLD True H1975_Epitope_Rep1 890.4749342092998 890.4743849679301 70.767 1 0.06172427172269264 0.004410853673646388 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000489038.5_1_7:33016023-33032371:+|nuORF', 'ENST00000494374.5_1_7:32997059-33028356:+|nuORF'] 137500 21157 YLPPGFLSA True PC9_epitope_Rep5 963.50656869075 963.50546993586 86.433 2 0.0616937469471287 0.004432558254711141 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 126337 8700 VPKNSDPWAA True PC9_epitope_Rep2 1083.53490869691 1083.53380993586 38.827 2 0.061674849048227474 0.004432558254711141 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 27987 12020 FQTHTTPVL True PC9_epitope_Rep1 1042.54474510462 1042.54364993586 51.097 2 0.0616498964193991 0.004432558254711141 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 4145 9856 AHVQNGIAL True PC9_epitope_Rep1 921.5032146458099 921.50210993586 42.77 2 0.06164190763990987 0.004432558254711141 0.9438714419765777 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 6719 17092 AQDEHLITF True PC9_epitope_Rep5 1072.5189242796 1072.51837496793 70.766 1 0.06163649932552624 0.004432558254711141 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 95631 14300 SAVGQFVSL True NCI_RA007_Epitope_Rep4 906.4810822188999 906.48053496793 62.306 1 0.06162889965899518 0.004432558254711141 0.9438714419765777 ['nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1', 'nc|ENSG00000185024|Q92994-6|BRF1', 'nc|ENSG00000185024|Q92994-4|BRF1'] 129066 20190 VTAPSGILDV True PC9_epitope_Rep2 970.53351171458 970.5329649679301 83.077 1 0.06160175769746992 0.004432558254711141 0.9438714419765777 ['ENSG00000162063|ENST00000397066|CCNF'] 113358 5695 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.54912993586 28.593 2 0.061601737390234904 0.004432558254711141 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 7671 4332 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep4 990.4618036426001 990.46070993586 23.089 2 0.061596851799731484 0.004432558254711141 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 108510 11849 TEFPGVVA True H1975_Epitope_Rep2 818.4174193331799 818.4168749679301 50.655 1 0.06159607905398469 0.004432558254711141 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 61345 4138 LLEGEESR True H1975_Epitope_Rep1 931.4610750503099 931.45996993586 20.844 2 0.06159432754269958 0.004432558254711141 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 44728 19528 IPQQVFQEV True PC9_epitope_Rep3 1086.57095985246 1086.5698699358602 80.345 2 0.06158161533187127 0.004432558254711141 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 7923 7863 ATDDSLHQL True PC9_epitope_Rep4 998.4668887067401 998.46578993586 37.665 2 0.06158130011036099 0.004432558254711141 0.9438714419765777 ['ENSG00000104549|ENST00000265896|SQLE'] 130016 21071 VTPPGFQLV True PC9_epitope_Rep1 956.53311779176 956.53202993586 85.882 2 0.06156274060863893 0.004432558254711141 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 2386 11468 AEQIVPLSA True H1975_Epitope_Rep1 926.5072969667399 926.5067449679301 49.094 1 0.06155796093261479 0.004432558254711141 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ENST00000507620.2_1_3:142215312-142218583:-|nuORF'] 17195 14611 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50708496793 61.469 1 0.061556709196731806 0.004432558254711141 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 95281 20923 SADTTILFV True PC9_epitope_Rep4 965.50696261357 965.50641496793 88.639 1 0.061544530504787955 0.004432558254711141 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 2293 6794 AEPSRGPPLP True H1975_Epitope_Rep3 1019.5399940773498 1019.53888993586 31.088 2 0.06153744808761237 0.004432558254711141 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 27837 19247 FQLEHIM[Oxidation]DL True PC9_epitope_Rep2 1160.5535959166 1160.5524899358602 79.407 2 0.061534639805224535 0.004432558254711141 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 91557 10519 RPALFSSSA True PC9_epitope_Rep5 934.4872302285 934.48612993586 45.448 2 0.06153366774775012 0.004432558254711141 0.9438714419765777 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5', 'ENST00000489842.1_1_9:135931263-135933364:+|nuORF'] 32677 10013 GHNLQTVQL True PC9_epitope_Rep4 1008.53524305008 1008.53414993586 46.177 2 0.06153178752810849 0.004432558254711141 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 43169 4294 IGSGC[Carbamidomethyl]NLDSAR True H1975_Epitope_Rep3 1148.5244209456298 1148.5233299358601 21.632 2 0.061503814510204154 0.004432558254711141 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 46272 11998 ITDVMDAY True H1975_Epitope_Rep2 926.4055343201399 926.4049849679301 51.232 1 0.061501668460883056 0.004432558254711141 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 61140 19115 LLDELPMIY True H1975_Epitope_Rep3 1105.57293399841 1105.57182993586 80.149 2 0.061499546206624164 0.004432558254711141 0.9438714419765777 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 72348 21109 MTEDGFLAV True PC9_epitope_Rep1 981.4477334852899 981.4471849679301 86.023 1 0.06149759486045773 0.004432558254711141 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 73850 13925 NHFMDNTTL True PC9_epitope_Rep3 1091.47059418819 1091.46948993586 58.642 2 0.06149747152211572 0.004432558254711141 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 40742 16291 HTVGELIEV True PC9_epitope_Rep2 995.5287606873098 995.52821496793 67.909 1 0.06148042448331672 0.004432558254711141 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 4976 9413 ALIVEPSR True PC9_epitope_Rep1 883.51271670035 883.51160993586 41.065 2 0.061478135603585386 0.004432558254711141 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 133007 10927 VYVQHPITF True NCI_RA007_Epitope_Rep1 1102.5811306133398 1102.58002993586 46.497 2 0.06146719943725393 0.004455555830589866 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 105952 19759 SVLGAITSV True PC9_epitope_Rep4 845.48583324617 845.48472993586 84.127 2 0.0614428116181119 0.004455555830589866 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 57567 13058 LELDTNLPA True H1975_Epitope_Rep1 984.51277627 984.51222496793 55.313 1 0.06144110094765561 0.004455555830589866 0.9438714419765777 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 67319 13803 LTDQAIFY True H1975_Epitope_Rep2 969.4807478657299 969.4801949679301 58.24 1 0.061433156392949065 0.004455555830589866 0.9438714419765777 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 101632 16978 SPFGTITSA True PC9_epitope_Rep3 879.43379767331 879.43324496793 70.466 1 0.06143000706862378 0.004455555830589866 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 134399 13162 WTAELGIRHV True PC9_epitope_Rep2 1180.63529144452 1180.6336349037902 55.9 3 0.061405392178561384 0.004455555830589866 0.9438714419765777 ['ENSG00000108106|ENST00000264552|UBE2S'] 24694 16476 FAVAPNQNL True PC9_epitope_Rep1 972.50288029264 972.50178993586 68.201 2 0.061395408691425006 0.004455555830589866 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 56846 6145 LEDEVTRNL True H1975_Epitope_Rep2 1087.55095268387 1087.54984993586 28.609 2 0.06139086819585359 0.004455555830589866 0.9438714419765777 ['ENSG00000172840|ENST00000311765|PDP2'] 85021 19842 QIGAKFWEV True PC9_epitope_Rep5 1076.5654805492 1076.5643899358602 81.37 2 0.06138171951882751 0.004455555830589866 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 120843 7628 VGDPHTVTV True PC9_epitope_Rep1 923.47124581119 923.47014993586 34.162 2 0.06137523529974076 0.004455555830589866 0.9438714419765777 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 17487 8474 EHGPNPIL True PC9_epitope_Rep4 875.45011644379 875.44900993586 40.064 2 0.06135673609480696 0.004455555830589866 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 17728 6557 EHSTEGSVSL True PC9_epitope_Rep2 1044.47236801 1044.4712699358602 30.634 2 0.061355791734919035 0.004455555830589866 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 123216 14424 VHLETILGA True PC9_epitope_Rep6 951.5389314481898 951.53782993586 67.377 2 0.06134432472460148 0.004455555830589866 0.9438714419765777 ['ENSG00000165591|ENST00000374900|FAAH2'] 4598 8245 ALADGVQKV True PC9_epitope_Rep5 899.5076313199099 899.50652993586 36.656 2 0.06134424577098985 0.004455555830589866 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 86154 10403 QPSEVLRTV True PC9_epitope_Rep5 1027.56620882519 1027.5651099358602 45.001 2 0.06133459690573705 0.004455555830589866 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 4470 5506 AKFSRPAQL True NCI_RA007_Epitope_Rep4 1016.5767139392399 1016.57560993586 27.77 2 0.06131516384393244 0.004455555830589866 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 103187 13813 SQPPVQVSV True PC9_epitope_Rep3 939.5025459394699 939.50144993586 58.211 2 0.06129465773210759 0.00447698434292216 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 35306 12492 GSSGGVIYL True H1975_Epitope_Rep2 851.43888305375 851.43833496793 53.141 1 0.06129081740525331 0.00447698434292216 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 1500 6386 AEEPASVTP True H1975_Epitope_Rep2 899.42362691243 899.42307496793 29.489 1 0.0612891403252148 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF'] 58279 11670 LETEVPVVA True H1975_Epitope_Rep2 955.5226126777098 955.52150993586 49.961 2 0.06127812027377429 0.00447698434292216 0.9438714419765777 ['ENST00000298552.7_1_9:135804334-135819933:-|nuORF', 'ENST00000490179.2_1_9:135806641-135819933:-|nuORF'] 86107 11275 QPQPQPYAV True PC9_epitope_Rep2 1026.5134449763398 1026.51287496793 48.695 1 0.06126555561933041 0.00447698434292216 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 88892 6311 REAPPVVPP True H1975_Epitope_Rep2 960.5392658013599 960.53816993586 29.211 2 0.06125365417949394 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 138687 15865 YRTEFTTAL True PC9_epitope_Rep3 1100.55022440788 1100.54912993586 66.175 2 0.06124197483841567 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 69514 18051 LVSPASFENV True PC9_epitope_Rep6 1061.5393253710101 1061.53822993586 82.064 2 0.061228033874009276 0.00447698434292216 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 5810 19323 APFLASAVSA True PC9_epitope_Rep5 932.4967322830399 932.49562993586 79.37 2 0.061225446273252625 0.00447698434292216 0.9438714419765777 ['ENSG00000146242|ENST00000369750|TPBG', 'TPBG|p.L117Sfs*56|1|0.45|ENSG00000146242|chr6:82365309-82365327|GCTGGCGGAGCTGGCCGCG/-|frameshift_variant'] 47519 15610 IYLPEVRKI True PC9_epitope_Rep3 1129.68593003505 1129.68427490379 65.193 3 0.0612196695634845 0.00447698434292216 0.9438714419765777 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 40366 2556 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 14.742 3 0.06118445102818991 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 20680 17189 EQIGALQEV True PC9_epitope_Rep1 985.5080252427299 985.50692993586 70.938 2 0.061178757354311296 0.00447698434292216 0.9438714419765777 ['ENSG00000171017|ENST00000306708|LRRC8E'] 48058 14377 KALSIFNEL True NCI_RA007_Epitope_Rep4 1033.58079626017 1033.5796899358602 62.609 2 0.06117755569821093 0.00447698434292216 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 44079 20118 ILLPRIIEA True PC9_epitope_Rep2 1036.6644663144798 1036.6633699358601 82.792 2 0.06115972859631544 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 139208 15715 YSVETVTLL True H1975_Epitope_Rep3 1023.5488274255499 1023.5482749679301 65.888 1 0.06115492829802514 0.00447698434292216 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 126100 11367 VPDVLVAD True H1975_Epitope_Rep1 826.4436340810199 826.4430849679301 48.701 1 0.061152420424534976 0.00447698434292216 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF'] 99934 21466 SLIFKLEEL True PC9_epitope_Rep3 1090.6274120994199 1090.62630993586 87.86 2 0.06115138581240289 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000080189|Q9NQQ7-2|SLC35C2', 'ENSG00000080189|ENST00000372230|SLC35C2', 'nc|ENSG00000080189|Q9NQQ7-3|SLC35C2'] 104147 5061 SSAGPGLLK True NCI_RA007_Epitope_Rep3 828.4705175352 828.46942993586 26.901 2 0.06114929554549848 0.00447698434292216 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 24159 18239 EYTDVLQKI True PC9_epitope_Rep2 1107.58119018299 1107.58067496793 75.475 1 0.061142368466161195 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1', 'ENST00000592284.5_1_19:55593146-55593922:+|nuORF', 'ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1'] 28808 14723 FTDGDAALEF True H1975_Epitope_Rep1 1084.4713053808398 1084.4707749679299 61.852 1 0.06113742284823017 0.00447698434292216 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 71951 10375 MPTQPQVQA True PC9_epitope_Rep5 998.4855159763398 998.48440993586 44.892 2 0.061135488063009585 0.00447698434292216 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 124310 14389 VLDNGILSY True H1975_Epitope_Rep2 992.51786165044 992.51676993586 60.498 2 0.06113493933949112 0.00447698434292216 0.9438714419765777 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3'] 63961 8109 LQAEIEGLK True H1975_Epitope_Rep1 999.5600608155898 999.55896993586 36.136 2 0.061132963132258834 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__H-INV:HIT000292931'] 101660 21163 SPFQFTVGP True PC9_epitope_Rep3 978.4810822188999 978.47998993586 86.69 2 0.06112888444986258 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 107754 18281 TAMDQVFHV True PC9_epitope_Rep2 1046.4855159763401 1046.4844099358602 75.639 2 0.06112229911179527 0.00447698434292216 0.9438714419765777 ['ENSG00000145012|ENST00000617246|LPP'] 86491 13856 QQYNSFVSL True NCI_RA007_Epitope_Rep4 1084.5189242796 1084.5178299358602 60.559 2 0.06111598839415475 0.00447698434292216 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 88204 9894 QYAPSTAQF True NCI_RA007_Epitope_Rep5 1011.4661604307499 1011.46506993586 44.7 2 0.06111453273106108 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 26346 19654 FIFSDTHEL True PC9_epitope_Rep3 1107.52367530687 1107.52256993586 80.834 2 0.06110012106727733 0.00447698434292216 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 95806 12711 [Acetylation]-SDFDEFER True H1975_Epitope_Rep1 1085.43016916115 1085.42957496793 53.951 1 0.06109800983591596 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 38701 8244 HHSGNTYFL True PC9_epitope_Rep6 1074.48829285766 1074.4871899358602 41.296 2 0.06109283821446668 0.00447698434292216 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 65117 10464 LSDPGSGLY True H1975_Epitope_Rep2 907.4287122928699 907.42760993586 45.267 2 0.06108275764814144 0.004500717147237747 0.9438714419765777 ['ENSG00000182108|ENST00000331808|DEXI'] 47765 12235 IYQRDPLKL True PC9_epitope_Rep1 1144.6604435631998 1144.65880490379 51.921 3 0.06107039522751712 0.004500717147237747 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 96875 10403 SESVPVIAA True H1975_Epitope_Rep2 871.46509780159 871.46454496793 45.028 1 0.061063433353366114 0.004500717147237747 0.9438714419765777 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 107484 12904 TAAGAVFL True H1975_Epitope_Rep2 748.41194002992 748.41139496793 54.747 1 0.06105910477202234 0.004500717147237747 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 7176 22297 ARDEIIWLL True PC9_epitope_Rep5 1127.63389446219 1127.63337496793 90.772 1 0.06104452022001931 0.004500717147237747 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 34958 16769 GQWYGPNTV True PC9_epitope_Rep2 1020.4664947839199 1020.46538993586 69.75 2 0.06103820129336691 0.004500717147237747 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 33404 16332 GLFIIDGK True PC9_epitope_Rep6 861.4960040070499 861.49490993586 75.193 2 0.06103301932563517 0.004500717147237747 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF'] 16238 5641 EEGPPPPSP True H1975_Epitope_Rep2 905.4130622287299 905.41196993586 26.697 2 0.06102564210725173 0.004500717147237747 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000468653.5_1_3:160117521-160130242:+|nuORF'] 14967 21727 DYSDIVTTL True PC9_epitope_Rep2 1025.49170647225 1025.4906099358602 89.049 2 0.06102410516585757 0.004500717147237747 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF', 'RAD21-EIF3H|4|fusion'] 95453 20445 SALPFITYL True H1975_Epitope_Rep2 1023.5640835668698 1023.56298993586 84.706 2 0.06102172809462372 0.004524886877828055 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 53762 12768 KYFDEHYEY True PC9_epitope_Rep5 1292.53496826656 1292.53333490379 54.121 3 0.06102114748724709 0.004524886877828055 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 52676 8137 KQFQFGHAL True NCI_RA007_Epitope_Rep4 1074.5610638750998 1074.5599699358602 38.089 2 0.061019689227918165 0.004524886877828055 0.9438714419765777 ['ENSG00000018510|ENST00000264167|AGPS'] 96738 5408 SEQHIPVSA True NCI_RA007_Epitope_Rep4 966.4770594676199 966.47596993586 27.373 2 0.06101802385064102 0.004524886877828055 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 131359 11345 VVSEGVPRI True PC9_epitope_Rep2 954.5498304850599 954.54872993586 48.958 2 0.06099674008569874 0.004524886877828055 0.9438714419765777 ['ENSG00000186222|ENST00000320776|BLOC1S4'] 21144 7848 ERDSQTQAIL True PC9_epitope_Rep4 1159.5833154413099 1159.5822099358602 37.602 2 0.06098640132251019 0.0045488257107540175 0.9438714419765777 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 66992 19500 LTAEDLFEA True PC9_epitope_Rep6 1007.4811417885498 1007.48057496793 87.668 1 0.06097690825179856 0.0045488257107540175 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 54915 7792 LAGPLRPAA True PC9_epitope_Rep2 864.5181364339599 864.51702993586 35.344 2 0.0609760916251874 0.0045488257107540175 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 59969 12074 LHNDSVVSL True PC9_epitope_Rep5 982.5083595959001 982.50726993586 51.437 2 0.06096157024178682 0.0045488257107540175 0.9438714419765777 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 71879 7953 MPNGDHIVSA True PC9_epitope_Rep4 1039.47567956863 1039.4745899358602 38.033 2 0.06095046413703795 0.0045488257107540175 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 39071 5141 HKVPGDVSL True NCI_RA007_Epitope_Rep5 950.5185303567799 950.51742993586 26.47 2 0.060943334816133864 0.0045488257107540175 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 24402 19913 FAFPGSTNSL True PC9_epitope_Rep4 1039.49746055903 1039.49636993586 84.731 2 0.06093969646076976 0.0045488257107540175 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 88287 18570 QYIEELQKF True PC9_epitope_Rep1 1196.6077392839995 1196.60664993586 76.218 2 0.060929401077645315 0.004592819398488815 0.9438714419765777 ['ENSG00000116191|ENST00000367635|RALGPS2', 'nc|ENSG00000116191|Q86X27-2|RALGPS2', 'ENST00000495034.5_1_1:178745899-178848128:+|nuORF', 'nc|ENSG00000116191|Q86X27-3|RALGPS2'] 1121 7580 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.45342993586 34.108 2 0.060927522791072206 0.004592819398488815 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 8227 18828 ATIGELAQV True PC9_epitope_Rep1 900.4916469025999 900.49054993586 77.208 2 0.06089684377708116 0.004592819398488815 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 34483 9083 GQDGQLKGF True PC9_epitope_Rep5 948.4664947839199 948.46538993586 39.884 2 0.060889320191280176 0.004592819398488815 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 108821 5299 TEQPSVSP True H1975_Epitope_Rep3 843.3974121645899 843.39686496793 25.462 1 0.060878606610359494 0.004592819398488815 0.9438714419765777 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.T506Pfs*15|1|0.15|ENSG00000197056|chr1:35113340-35113340|A/-|frameshift_variant'] 96873 10142 SESVPVIAA True H1975_Epitope_Rep1 871.46509780159 871.46454496793 43.95 1 0.060866636180347815 0.004592819398488815 0.9438714419765777 ['ENST00000513565.6_1_5:122694091-122724023:-|nuORF', 'nc|ENSG00000168944|Q8N960-2|CEP120', 'ENSG00000168944|ENST00000306467|CEP120'] 76947 21178 NVPEGLLATV True PC9_epitope_Rep1 1011.56006081559 1011.55896993586 86.296 2 0.06086450203648072 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 101530 9697 SPALLREA True PC9_epitope_Rep5 855.48141657207 855.48030993586 42.267 2 0.060862887165257194 0.004592819398488815 0.9438714419765777 ['ENSG00000158863|ENST00000289921|FHIP2B'] 97828 13582 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 57.266 2 0.06084758553836052 0.004592819398488815 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 35005 11285 GRAPGGLSL True PC9_epitope_Rep3 826.4661008611 826.4650099358599 48.415 2 0.06084679047533129 0.004592819398488815 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 5175 22982 ALPEIFTEL True PC9_epitope_Rep2 1031.55391280599 1031.55280993586 93.895 2 0.06080893546421886 0.004592819398488815 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 113779 16407 TRDQFLDTL True PC9_epitope_Rep4 1107.5560380643099 1107.55547496793 71.071 1 0.060802279892606975 0.004592819398488815 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 21674 13854 ERVPINDVL True PC9_epitope_Rep6 1053.58185888933 1053.5807699358602 65.109 2 0.060797259861786454 0.004592819398488815 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000486705.1_1_3:139062973-139067190:+|nuORF', 'ENST00000483545.1_1_3:139065838-139069914:+|nuORF', 'nc|ENSG00000175110|P82650-2|MRPS22'] 90704 4481 RKNDENITL True NCI_RA007_Epitope_Rep3 1101.57783613805 1101.5767299358602 24.448 2 0.06079486270815357 0.004592819398488815 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2'] 129144 10891 VTDDALVY True H1975_Epitope_Rep3 894.4334633201399 894.4329149679301 46.977 1 0.060788329983154955 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 29238 15838 FVDEPLIHATT True PC9_epitope_Rep2 1241.6292030045697 1241.62810993586 66.179 2 0.06078538316048214 0.004592819398488815 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 52292 9235 KPAEFTVDA True PC9_epitope_Rep2 976.4865615221598 976.48546993586 40.861 2 0.06077378311988049 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 71819 18519 MPAGSFITA True PC9_epitope_Rep1 893.43168949833 893.43058993586 76.023 2 0.06076211267471376 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 21660 11573 ERTSFNYAM True PC9_epitope_Rep4 1117.4862442523297 1117.4851499358601 52.275 2 0.060755364450048505 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 35163 10741 GSDDGVLAY True H1975_Epitope_Rep2 895.3923267841499 895.39177496793 46.342 1 0.06075507951828464 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 46736 14210 IVAPGKGILAA True PC9_epitope_Rep5 1008.6331661861998 1008.63206993586 59.665 2 0.06070439694166439 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 105008 3027 STIGPEGVHQK True NCI_RA007_Epitope_Rep4 1151.5934862021898 1151.5918349037902 16.946 3 0.06070135668525946 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 56708 5300 LEAERSTNIAA True H1975_Epitope_Rep2 1173.5989655054502 1173.5978699358602 25.442 2 0.06068974638847658 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'ENST00000609021.1_1_6:125597294-125597426:-|nuORF'] 118617 3290 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 17.295 2 0.060682149064946 0.004592819398488815 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 3859 9059 AHAVGNVEL True PC9_epitope_Rep2 908.4715801643599 908.47048993586 40.191 2 0.06065837009503096 0.004592819398488815 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ARHGAP15-KYNU|2|fusion', 'ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU', 'KYNU|p.F306Lfs*17|1|0.1|ENSG00000115919|chr2:143029640-143029640|T/-|frameshift_variant', 'KYNU-ARHGAP15|1|fusion'] 9819 15783 AYLIQVHKW True PC9_epitope_Rep5 1156.6393141958 1156.63765490379 65.702 3 0.060657357206207664 0.004592819398488815 0.9438714419765777 ['ENSG00000110536|ENST00000326674|PTPMT1', 'ENST00000534775.1_1_11:47587445-47593178:+|nuORF'] 75850 11626 NRDLATPVM True PC9_epitope_Rep5 1015.51206507735 1015.51096993586 49.714 2 0.060655618695001697 0.004592819398488815 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 138485 16169 YRGQFPEL True PC9_epitope_Rep3 1008.5028802926398 1008.50178993586 67.335 2 0.06065380033115659 0.004592819398488815 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 71004 9772 MEQQTLSIA True H1975_Epitope_Rep3 1019.4957463068699 1019.49464993586 42.611 2 0.060648454626424105 0.004592819398488815 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 87977 10248 QVRDVIIAA True PC9_epitope_Rep6 983.5763795860698 983.57528993586 50.083 2 0.06064114210256426 0.004592819398488815 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 105432 14754 SVALVIHNV True PC9_epitope_Rep3 950.5549158655001 950.55380993586 61.889 2 0.06058914921492781 0.004592819398488815 0.9438714419765777 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2'] 96943 14957 SEVEIAWPA True H1975_Epitope_Rep2 1000.4865615221598 1000.48597496793 62.684 1 0.06056620902295098 0.004592819398488815 0.9438714419765777 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 131228 20681 VVPQQLLTV True PC9_epitope_Rep3 995.60153170475 995.60042993586 84.823 2 0.060565371423120976 0.004592819398488815 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 48696 7349 KEMENFEAP True H1975_Epitope_Rep2 1093.4750108622898 1093.47390993586 33.208 2 0.06056314606316476 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000474616.5_1_22:37154357-37156899:-|nuORF', 'ENST00000471809.5_1_22:37154357-37154516:-|nuORF'] 118841 3861 VEEKEGIPP True H1975_Epitope_Rep3 996.5127762699998 996.51166993586 19.965 2 0.06055954775950183 0.004592819398488815 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 76297 13514 NSDVSLLNY True H1975_Epitope_Rep3 1023.48728979815 1023.48677496793 57.26 1 0.06055845150669379 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 131779 22431 VYAFSIENF True PC9_epitope_Rep3 1088.5178616504397 1088.51676993586 91.557 2 0.060557497773516863 0.004592819398488815 0.9438714419765777 ['ENST00000528557.5_1_1:26759436-26769365:+|nuORF', 'nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS'] 113987 19430 TRLPEFSEL True PC9_epitope_Rep1 1090.56587447202 1090.56537496793 79.549 1 0.0605518603767713 0.004592819398488815 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 75758 15760 NRAISVIL True PC9_epitope_Rep5 884.5443511817999 884.54324993586 65.615 2 0.060542618846624215 0.004592819398488815 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1'] 14800 22942 DYATIFNNL True PC9_epitope_Rep3 1069.5080252427301 1069.5069299358602 93.513 2 0.06054072680687235 0.004592819398488815 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 96343 9365 SEFGKIYGP True NCI_RA007_Epitope_Rep4 996.4916469025998 996.49054993586 42.877 2 0.06053932457880069 0.004592819398488815 0.9438714419765777 ['ENSG00000082781|ENST00000296181|ITGB5'] 47789 5991 IYQRHVYNL True NCI_RA007_Epitope_Rep5 1204.6352914445197 1204.6336349037902 29.728 3 0.06052838474136441 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 91872 7725 RPNQDGTLIA True PC9_epitope_Rep5 1083.56727145435 1083.5661699358602 34.655 2 0.060523822150993216 0.004592819398488815 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1'] 103816 10674 SRGQGLLL True PC9_epitope_Rep4 842.4974009893799 842.49630993586 48.804 2 0.060519395954462415 0.004592819398488815 0.9438714419765777 ['C1QTNF1|p.N214Tfs*6|1|0.37|ENSG00000173918|chr17:79047881-79047881|G/-|frameshift_variant', 'ENSG00000173918|ENST00000579760|C1QTNF1', 'nc|ENSG00000173918|Q9BXJ1-2|C1QTNF1'] 116261 18553 TVVAVVAGV True PC9_epitope_Rep5 813.4960040070499 813.49490993586 76.387 2 0.06051683759961033 0.004592819398488815 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 840 11127 [Acetylation]-ADFDTYDDR True H1975_Epitope_Rep1 1158.4465475012798 1158.44597496793 47.766 1 0.06050083133535206 0.004592819398488815 0.9438714419765777 ['nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H', 'ENST00000479338.5_1_7:73588713-73604094:+|nuORF', 'EIF4H|p.T100Ifs*23|1|0.1|ENSG00000106682|chr7:74189723-74189724|AC/-|frameshift_variant', 'ENST00000489484.5_1_7:73588713-73604262:+|nuORF'] 74005 5370 NHQKDIQVL True PC9_epitope_Rep4 1093.58800689893 1093.5869099358601 27.378 2 0.06049523267646171 0.004592819398488815 0.9438714419765777 ['ENSG00000153561|ENST00000283632|RMND5A'] 54067 18773 KYLVIGDLLF True NCI_RA007_Epitope_Rep5 1179.69034670915 1179.68924993586 79.045 2 0.060456500895965666 0.004592819398488815 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 49455 8540 KITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1246.62273800457 1246.6216499358602 37.776 2 0.060438311500739694 0.004606138233410513 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 63963 12181 LQAEIEGLK True PC9_epitope_Rep3 999.5600608155898 999.55896993586 51.89 2 0.060433195353544196 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__REFSEQ:XP_092267', 'CON__H-INV:HIT000292931'] 21655 13163 ERTSFNYAM True PC9_epitope_Rep1 1117.4862442523297 1117.4851499358601 55.497 2 0.06042738066478732 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 75399 20310 NQFNSFISV True PC9_epitope_Rep4 1054.5083595959 1054.5072699358602 86.265 2 0.060425512770558 0.004606138233410513 0.9438714419765777 ['ENSG00000136021|ENST00000360820|SCYL2'] 35604 4767 GTLDPVEK True NCI_RA007_Epitope_Rep5 857.44944773745 857.44834993586 25.02 2 0.06042137312931038 0.004606138233410513 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 25323 7933 FEEQVNNIKP True H1975_Epitope_Rep2 1216.6088019131598 1216.6077099358602 35.46 2 0.06040966900327081 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1081Kfs*25|2|0.4|ENSG00000139734|chr13:59774745-59774746|-/T|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3'] 21827 11540 ESDSTIVYY True H1975_Epitope_Rep3 1075.47097102767 1075.47037496793 49.514 1 0.06040666711081756 0.004606138233410513 0.9438714419765777 ['ENST00000423257.1_1_17:17360441-17360570:+|nuORF', 'ENST00000485209.5_1_1:184027321-184041978:+|nuORF', 'ENSG00000198860|ENST00000645668|TSEN15'] 7938 19968 ATDFGEALV True PC9_epitope_Rep5 921.4443623570098 921.44381496793 81.858 1 0.060388970767130866 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 99577 9219 SLFGSPVAK True NCI_RA007_Epitope_Rep2 904.50181766348 904.50072993586 40.469 2 0.06037867561823645 0.004606138233410513 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 6334 6053 APRQPGLM[Oxidation]A True PC9_epitope_Rep4 955.4909360903898 955.48982993586 30.277 2 0.06037571666227005 0.004606138233410513 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 113710 11836 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 50.546 2 0.06037465475531325 0.004606138233410513 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 118619 3430 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 17.981 2 0.06037099695281652 0.004606138233410513 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 116258 18147 TVVAVVAGV True PC9_epitope_Rep2 813.4960040070499 813.49490993586 75.104 2 0.060368807427714354 0.004606138233410513 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 116944 15754 TYPENWRAF True PC9_epitope_Rep6 1182.5458077337798 1182.54470993586 72.83 2 0.06035672839722284 0.004606138233410513 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 38699 11252 HHSGNTYFL True PC9_epitope_Rep5 1074.48829285766 1074.4871899358602 48.271 2 0.06035445643317903 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 59379 12080 LGLGIDEDD True H1975_Epitope_Rep1 945.42910621569 945.42855496793 51.478 1 0.06034583603738187 0.004606138233410513 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000530115.1_1_11:27910388-27910514:-|nuORF'] 120440 7728 VFTSRSAAF True NCI_RA007_Epitope_Rep5 984.5028802926398 984.50178993586 36.426 2 0.06033483697039145 0.004606138233410513 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 88980 2820 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 14.915 2 0.06032951294868764 0.004606138233410513 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 13289 7427 DLYDAGVK True NCI_RA007_Epitope_Rep2 879.43379767331 879.43270993586 33.516 2 0.0603284407173585 0.004606138233410513 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 40498 15148 HSEVVAIL True PC9_epitope_Rep5 866.4861675993399 866.48506993586 63.274 2 0.06031439334346357 0.004606138233410513 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 73766 14058 NHASLISAL True PC9_epitope_Rep4 924.50288029264 924.5023349679301 61.984 1 0.0602910549271518 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 48403 2722 KEDKPPLAP True H1975_Epitope_Rep2 993.5494961318898 993.54838993586 14.564 2 0.06027874912081471 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'ENST00000432006.1_1_7:16624422-16624878:-|nuORF'] 35598 4948 GTLASVYHK True NCI_RA007_Epitope_Rep2 974.5185303567802 974.51742993586 23.867 2 0.06027335277590108 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 44321 9091 IMDDPAGNSY True H1975_Epitope_Rep1 1081.43862535357 1081.43752993586 39.872 2 0.06026234548946141 0.004606138233410513 0.9438714419765777 ['ENSG00000109917|ENST00000227322|ZPR1'] 32852 20440 GIIDAFHQI True PC9_epitope_Rep5 1012.5341804209202 1012.53308993586 83.66 2 0.060256259294401635 0.004606138233410513 0.9438714419765777 ['ENSG00000100372|ENST00000435456|SLC25A17', 'MKL1-SLC25A17|1|fusion', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 54352 7045 KYQEVTNNL True PC9_epitope_Rep6 1107.5560380643099 1107.5549499358601 36.105 2 0.06024704566682249 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 120455 23104 VFTYVGALF True PC9_epitope_Rep3 1015.5378688190298 1015.53676993586 94.138 2 0.0602352319796346 0.004606138233410513 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 131801 9518 VYANGIRNI True PC9_epitope_Rep4 1018.5559784946599 1018.55488993586 44.222 2 0.06023434680331994 0.004606138233410513 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 108480 6705 TEETATTVVA True H1975_Epitope_Rep3 1020.4975201286799 1020.4969749679301 30.745 1 0.06022651652548008 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 84677 17471 QHFDPVIQL True PC9_epitope_Rep6 1095.5712942056298 1095.57018993586 79.825 2 0.060213632401715476 0.004606138233410513 0.9438714419765777 ['ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 8252 17678 ATINEVVQV True PC9_epitope_Rep2 971.52876068731 971.52766993586 73.279 2 0.06019566789562593 0.004606138233410513 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217', 'ZNF217|p.S275Ifs*4|1|0.32|ENSG00000171940|chr20:53582004-53582005|-/T|frameshift_variant'] 73789 15371 NHDSRLWSL True PC9_epitope_Rep3 1126.55195574338 1126.55084993586 64.28 2 0.06019118467035017 0.004606138233410513 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 103244 14402 SQSSLIHLV True PC9_epitope_Rep6 982.5447451046201 982.54364993586 67.295 2 0.060185358979999194 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ACOT7|p.R364Gfs*5|1|0.24|ENSG00000097021|chr1:6264651-6264651|C/-|frameshift_variant', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 35452 14635 GTEFTTVLY True H1975_Epitope_Rep2 1029.5018772331298 1029.5007899358602 61.452 2 0.06016742197613436 0.004606138233410513 0.9438714419765777 ['TP63-TPRG1|2|fusion', 'TP63-TPRG1|3|fusion', 'nc|ENSG00000073282|Q9H3D4-11|TP63', 'TP63|p.H608Pfs*20|1|0.38|ENSG00000073282|chr3:189894278-189894291|CTCCACGAATTCTC/-|frameshift_variant', 'nc|ENSG00000073282|Q9H3D4-9|TP63', 'nc|ENSG00000073282|Q9H3D4-2|TP63', 'nc|ENSG00000073282|Q9H3D4-12|TP63', 'nc|ENSG00000073282|Q9H3D4-3|TP63', 'nc|ENSG00000073282|Q9H3D4-7|TP63', 'nc|ENSG00000073282|Q9H3D4-10|TP63', 'nc|ENSG00000073282|Q9H3D4-5|TP63', 'nc|ENSG00000073282|Q9H3D4-4|TP63', 'nc|ENSG00000073282|Q9H3D4-8|TP63', 'nc|ENSG00000073282|Q9H3D4-6|TP63', 'chr3:189872995-189880064|439|16.81|0.81|4.37|+|ENST00000437221|TP63,TP63', 'ENST00000460036.1_1_3:189507541-189590785:+|nuORF', 'ENSG00000073282|ENST00000264731|TP63'] 132690 14158 VYSDYLQTI True NCI_RA007_Epitope_Rep3 1100.53899101784 1100.5378899358602 62.978 2 0.06016453675984685 0.004606138233410513 0.9438714419765777 ['ENSG00000179715|ENST00000546455|PCED1B'] 1272 9318 AEDPVSEVP True H1975_Epitope_Rep2 941.43419159613 941.43308993586 40.802 2 0.060153733010889957 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 105083 11504 STLDGSLHAV True PC9_epitope_Rep2 998.5032742154599 998.50216993586 49.574 2 0.06014882467246592 0.004606138233410513 0.9438714419765777 ['ENST00000583028.1_1_17:62175367-62207458:-|nuORF', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENSG00000178607|ENST00000433197|ERN1'] 76469 13909 NTDFGDEFY True H1975_Epitope_Rep1 1106.4192698079798 1106.41867496793 58.653 1 0.06012371086196172 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 129320 6402 VTDSIRDEY True H1975_Epitope_Rep3 1096.5036681382799 1096.50307496793 29.602 1 0.06012136317455172 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'DNM1L|p.G587Efs*12|1|0.19|ENSG00000087470|chr12:32740116-32740117|GC/-|frameshift_variant', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 43388 7546 IHQETATVL True PC9_epitope_Rep4 1010.53965972418 1010.53856993586 36.395 2 0.06011365112407686 0.004606138233410513 0.9438714419765777 ['ENSG00000164002|ENST00000415550|EXO5'] 62135 20481 LLPDTINSI True PC9_epitope_Rep5 984.5491617787201 984.54806993586 83.819 2 0.060107327340506396 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 3850 8681 AHAGSLTNL True PC9_epitope_Rep5 882.4559301002201 882.45482993586 38.333 2 0.060089175288588606 0.004606138233410513 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000484998.5_1_20:2635830-2636687:+|nuORF', 'ENST00000480992.5_1_20:2635438-2636687:+|nuORF'] 34641 18899 GQISEVVVV True PC9_epitope_Rep1 928.5229470308799 928.52239496793 77.479 1 0.060062266186877614 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 40640 11871 HTGPVFTV True PC9_epitope_Rep2 856.44430278736 856.44320993586 50.987 2 0.06005599272076807 0.004606138233410513 0.9438714419765777 ['ENST00000547496.5_1_12:89853476-89885774:-|nuORF', 'ENST00000539190.6_1_12:89855074-89919672:-|nuORF', 'nc|ENSG00000139323|Q8TC44-2|POC1B', 'ENSG00000139323|ENST00000313546|POC1B'] 37501 19217 GYGFVSFYNK True PC9_epitope_Rep5 1180.5553097883196 1180.5542099358602 78.959 2 0.060054470868972004 0.004606138233410513 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 27366 21640 FMPPGLQEL True PC9_epitope_Rep5 1030.5157534754599 1030.51464993586 88.282 2 0.060047014536299875 0.004606138233410513 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 76854 22264 NVIDYIDTI True PC9_epitope_Rep2 1064.53899101784 1064.5378899358602 91.118 2 0.06002768807498899 0.004606138233410513 0.9438714419765777 ['ENSG00000156017|ENST00000376834|CARNMT1'] 24713 13946 FAVPENSSV True PC9_epitope_Rep4 948.4552613938799 948.45416993586 61.547 2 0.06002631225605527 0.004606138233410513 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 724 15602 AAVNVICEL True H1975_Epitope_Rep2 930.48445334718 930.48390496793 65.169 1 0.060024901455568096 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1'] 123692 6448 VIPELNGK True NCI_RA007_Epitope_Rep5 868.50181766348 868.50072993586 31.469 2 0.060018576902364305 0.004606138233410513 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 68624 20382 LVAEDIPLLFS True H1975_Epitope_Rep3 1215.6750905678298 1215.6739899358602 85.22 2 0.060002544893713705 0.004606138233410513 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 132918 16833 VYTVVDEMF True NCI_RA007_Epitope_Rep4 1101.5052483614097 1101.5041499358601 72.94 2 0.06000114591230493 0.004606138233410513 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 26275 18079 FIDDANYSV True PC9_epitope_Rep2 1042.4607406971402 1042.4596499358602 74.843 2 0.06000100476653881 0.004606138233410513 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 131402 9451 VVTGGVQSV True PC9_epitope_Rep5 844.4654321547599 844.4648849679301 41.308 1 0.0599921429348519 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 113661 15154 TRDELEWKL True PC9_epitope_Rep2 1188.6138872935999 1188.61225490379 63.547 3 0.05998801096548207 0.004606138233410513 0.9438714419765777 ['ENSG00000115539|ENST00000264254|PDCL3', 'ENST00000398028.3_1_6:151149346-151149517:+|nuORF', 'ENST00000534575.1_1_8:61300140-61300551:+|nuORF', 'ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 22394 15856 ETEVSFLDY True H1975_Epitope_Rep1 1101.4866210918099 1101.4860749679299 66.298 1 0.05998671079827363 0.004606138233410513 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8'] 69172 7216 LVLVGDGGTGK True NCI_RA007_Epitope_Rep5 1014.57095985246 1014.56986993586 34.435 2 0.05998461004958779 0.004606138233410513 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 73136 13616 NEAWNGFVAA True NCI_RA007_Epitope_Rep3 1077.4879585044898 1077.48686993586 60.858 2 0.05998429692497152 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 68705 13717 LVDDPLEY True H1975_Epitope_Rep2 962.4596780679799 962.45858993586 57.907 2 0.05996641342420481 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 83108 17055 PYNPLWAQL True NCI_RA007_Epitope_Rep3 1100.5654805492 1100.5643899358602 74.951 2 0.05996397911929178 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 110017 11975 THTTPVLL True PC9_epitope_Rep3 880.5018176634799 880.50072993586 51.084 2 0.059959151572294984 0.004606138233410513 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 76233 11166 NSATGVPTV True PC9_epitope_Rep1 844.42904664604 844.4284949679301 47.835 1 0.05995796065697742 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 70100 15776 LYITEPKTI True PC9_epitope_Rep3 1076.61176203528 1076.6106699358602 65.84 2 0.059957326029465824 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 132724 20905 VYSGGVYLF True PC9_epitope_Rep4 1003.5014833103099 1003.50038993586 88.571 2 0.05993118605600567 0.004606138233410513 0.9438714419765777 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 36285 9920 GVGPIRDV True PC9_epitope_Rep1 811.4552018242299 811.45410993586 43.017 2 0.05992271270115212 0.004606138233410513 0.9438714419765777 ['ENSG00000170043|ENST00000303731|TRAPPC1'] 60404 8791 LIIYSRNQ True NCI_RA007_Epitope_Rep2 1005.5607295219299 1005.55962993586 38.841 2 0.059921712623761496 0.004606138233410513 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.T725S|2|0.23|ENSG00000181544|chrX:14843974-14843974|T/A|missense_variant'] 112860 10859 TPNRATFVV True PC9_epitope_Rep2 1003.5450794577899 1003.5439899358599 47.087 2 0.059920533303371964 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 35454 15418 GTELGNELFY True H1975_Epitope_Rep1 1141.5291546101298 1141.52857496793 64.575 1 0.059905257949964964 0.004606138233410513 0.9438714419765777 ['ENSG00000126821|ENST00000247225|SGPP1'] 101764 6206 SPHPPSEVTA True PC9_epitope_Rep3 1020.48762415132 1020.48652993586 28.912 2 0.059899155473751776 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 125731 20787 VNEVAILSL True PC9_epitope_Rep3 956.5542471591599 956.55314993586 85.228 2 0.05988758611533424 0.004606138233410513 0.9438714419765777 ['ENST00000455385.6_1_7:105731299-105731344:-|nuORF'] 76843 10272 NVHAVFQEA True PC9_epitope_Rep5 1013.4930438849299 1013.49194993586 44.498 2 0.05988209640790241 0.004606138233410513 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 140565 19142 YYLNLIEL True NCI_RA007_Epitope_Rep3 1039.5589981864298 1039.5579099358602 83.598 2 0.059879367285700945 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF'] 71349 12525 MHSIGGVQV True PC9_epitope_Rep3 926.4643866089399 926.46328993586 53.202 2 0.059870880309165514 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant', 'LRBA|p.L476I|1|0.18|ENSG00000198589|chr4:150908401-150908401|G/T|missense_variant'] 102752 4430 SQEGRPVQV True PC9_epitope_Rep2 998.5145076054997 998.51340993586 22.397 2 0.05987006950546406 0.004606138233410513 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 11762 15602 DHIHIIAL True PC9_epitope_Rep2 930.52870111766 930.52760993586 65.292 2 0.05986871852792326 0.004606138233410513 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 45365 6388 ISDLAQHY True H1975_Epitope_Rep2 945.4555957470502 945.45448993586 29.495 2 0.059865545516451235 0.004606138233410513 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 26795 11872 FLDTNETPY True H1975_Epitope_Rep3 1098.48695544498 1098.48637496793 50.815 1 0.05985347509150955 0.004606138233410513 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 2528 8300 [Acetylation]-AEQVALSR True H1975_Epitope_Rep1 914.4821451643598 914.48159496793 36.858 1 0.059848728681165135 0.004606138233410513 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 31311 5921 GEAAGSPVP True H1975_Epitope_Rep2 783.37628279719 783.37573496793 27.762 1 0.05981850668272725 0.004606138233410513 0.9438714419765777 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 23623 17956 EYFKSFNF True PC9_epitope_Rep6 1080.4916469026 1080.4905499358601 81.696 2 0.05980237077743809 0.004606138233410513 0.9438714419765777 ['ENSG00000151470|ENST00000425929|C4orf33'] 115561 8295 TVIAKVNNV True PC9_epitope_Rep1 956.5654805492 956.56438993586 36.741 2 0.05980227130037134 0.004606138233410513 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 77495 11872 NYPSAFHSV True PC9_epitope_Rep1 1020.46649478392 1020.46538993586 50.532 2 0.05979945685497601 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 87030 10845 QSDGGGLLY True H1975_Epitope_Rep3 908.4239612655999 908.4234149679301 46.797 1 0.059796933283359055 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'ENST00000418472.6_1_18:46856042-46938282:-|nuORF'] 71080 5694 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38912993586 26.932 2 0.059793800798026146 0.004606138233410513 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 1207 6628 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.40686993586 30.403 2 0.05978722852510149 0.004606138233410513 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 7885 4887 ATAPPGVLK True NCI_RA007_Epitope_Rep5 852.50690304392 852.50580993586 25.49 2 0.05978040264277638 0.004606138233410513 0.9438714419765777 ['ENSG00000105538|ENST00000222145|RASIP1'] 98556 21669 SILSSLTSV True PC9_epitope_Rep2 905.5069626135701 905.50586993586 88.826 2 0.059780171683434566 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 133061 12212 VYWDSAGAAHF True NCI_RA007_Epitope_Rep4 1222.5407223533396 1222.5396299358601 53.968 2 0.05975093614194511 0.004606138233410513 0.9438714419765777 ['ENSG00000136213|ENST00000618655|CHST12'] 48518 11194 KEFPGFLEN True NCI_RA007_Epitope_Rep3 1079.5287606873098 1079.52766993586 51.138 2 0.05974291664570806 0.004606138233410513 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 136478 14031 YHHGYSYIL True PC9_epitope_Rep5 1151.53999407735 1151.5388899358602 58.986 2 0.05971992173586841 0.004606138233410513 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 87969 10923 QVRDVIIAA True PC9_epitope_Rep4 983.5763795860698 983.57528993586 49.784 2 0.05969538023469821 0.004606138233410513 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 17757 5061 EHTQTVSQL True PC9_epitope_Rep2 1041.50908787189 1041.50798993586 24.841 2 0.05969498303864373 0.004606138233410513 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 35010 11050 GRAPGGLSL True PC9_epitope_Rep5 826.4661008611 826.4650099358599 47.491 2 0.05967453272115573 0.004606138233410513 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 39012 7909 HKFSSAIGL True NCI_RA007_Epitope_Rep4 958.5236157372199 958.52250993586 37.16 2 0.059657447238598796 0.004606138233410513 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 136389 11791 YHDYGHLEL True PC9_epitope_Rep4 1145.51417325233 1145.51251490379 53.123 3 0.05965743088734075 0.004606138233410513 0.9438714419765777 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 42459 15083 IEQPTPFLP True H1975_Epitope_Rep2 1040.5542471591598 1040.55367496793 63.168 1 0.05965705449603448 0.004606138233410513 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 124189 17708 VLAETLTQV True PC9_epitope_Rep4 972.5491617787198 972.54806993586 76.138 2 0.059652080960448516 0.004606138233410513 0.9438714419765777 ['CREBBP-TRAP1|1|fusion', 'CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 108798 7031 TEQEVAQVASA True H1975_Epitope_Rep3 1131.54078192299 1131.53968993586 32.008 2 0.05965058609377989 0.004606138233410513 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 120293 14553 VFPDKGYSF True PC9_epitope_Rep6 1058.5072969667401 1058.5061899358602 67.872 2 0.059634117916408505 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 6601 18162 APWPPKGLVPA True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 75.164 2 0.05962645462588425 0.004606138233410513 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 5176 23108 ALPEIFTEL True PC9_epitope_Rep3 1031.55391280599 1031.55280993586 94.152 2 0.05959498312807643 0.004628261939931069 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 71871 9168 MPNGDHIVSA True PC9_epitope_Rep1 1039.47567956863 1039.4745899358602 40.114 2 0.05958539249831838 0.004628261939931069 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 24705 20215 FAVFQTTFF True H1975_Epitope_Rep1 1106.54368247546 1106.5425899358602 84.104 2 0.05958487516629412 0.004628261939931069 0.9438714419765777 ['ENSG00000145623|ENST00000274276|OSMR', 'nc|ENSG00000145623|Q99650-2|OSMR'] 61580 19788 LLGPPPVGV True PC9_epitope_Rep3 847.51673945163 847.51564993586 81.345 2 0.05957952021805857 0.004628261939931069 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 138477 19713 YRGIFPVL True PC9_epitope_Rep4 963.5541875895099 963.55308993586 83.949 2 0.05957837007640448 0.004628261939931069 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 5945 9088 APIIDVVR True H1975_Epitope_Rep1 881.53345214493 881.53234993586 39.861 2 0.059575944977805564 0.004628261939931069 0.9438714419765777 ['ENSG00000166441|ENST00000314138|RPL27A'] 11953 7868 DHSVAESL True PC9_epitope_Rep2 856.3926611373201 856.39156993586 35.631 2 0.05957535981435011 0.004628261939931069 0.9438714419765777 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 140164 9769 YVTEKVLAA True PC9_epitope_Rep4 992.5542471591598 992.55314993586 45.218 2 0.05957472733633186 0.004628261939931069 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENSG00000136872|ENST00000647789|ALDOB'] 130414 11196 VTVPPGPSL True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 49.951 2 0.059573955177651045 0.004628261939931069 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 31331 11389 GEAIPALAA True H1975_Epitope_Rep2 811.44396843419 811.44341496793 48.857 1 0.05956285308893262 0.004628261939931069 0.9438714419765777 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 130437 17706 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.48982993586 72.902 2 0.05955004637605276 0.004628261939931069 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 84641 13660 QHEEFVTSL True PC9_epitope_Rep2 1088.51383889916 1088.51274993586 57.835 2 0.05954267659448874 0.004628261939931069 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 102346 6947 SPVFTSRSAA True PC9_epitope_Rep1 1021.51925863277 1021.51816993586 31.528 2 0.05953124643069658 0.004628261939931069 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 25529 15010 FEQFPPPEI True H1975_Epitope_Rep2 1102.5335117145798 1102.5324099358602 62.886 2 0.05952736736306324 0.004628261939931069 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 100182 20005 SLLGGDVVSV True PC9_epitope_Rep4 944.51786165044 944.51731496793 85.082 1 0.05952695014545973 0.004628261939931069 0.9438714419765777 ['nc|ENSG00000157514|Q99576|TSC22D3'] 17264 15172 EHASSLLEL True PC9_epitope_Rep6 997.5080252427299 997.50692993586 70.435 2 0.05951951852371319 0.004628261939931069 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 4977 8736 ALIVEPSR True PC9_epitope_Rep2 883.51271670035 883.51160993586 38.963 2 0.05951722618420602 0.004628261939931069 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 100185 18852 SLLGGDVVSV True PC9_epitope_Rep6 944.51786165044 944.51676993586 85.162 2 0.05950672825797003 0.004628261939931069 0.9438714419765777 ['nc|ENSG00000157514|Q99576|TSC22D3'] 44603 18840 IPHLLGDVV True PC9_epitope_Rep4 961.55966689277 961.55856993586 80.555 2 0.05950055159854532 0.004628261939931069 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1', 'nc|ENSG00000137409|Q9NZJ7-3|MTCH1'] 17668 6431 EHSGLTTGV True PC9_epitope_Rep1 899.43486030247 899.43376993586 29.542 2 0.05949729825649377 0.004628261939931069 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19'] 31355 5210 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.39082993586 25.111 2 0.05948858612368534 0.004628261939931069 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 103831 9793 SRIARALAL True PC9_epitope_Rep4 969.6083484206899 969.60724993586 45.311 2 0.05948412053680222 0.004628261939931069 0.9438714419765777 ['ENSG00000142871|ENST00000451137|CCN1'] 106807 5754 SYGKQTNVL True NCI_RA007_Epitope_Rep4 1008.52400966004 1008.52290993586 28.751 2 0.05947795290103422 0.004645675097706659 0.9438714419765777 ['ENSG00000175336|ENST00000398189|APOF'] 105368 3437 STYPAQNGQVK True NCI_RA007_Epitope_Rep4 1191.5884008217497 1191.58730993586 19.121 2 0.05947679752731289 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 89386 7994 REMGQFYEA True H1975_Epitope_Rep2 1129.4862442523297 1129.4851499358601 35.698 2 0.05946414720382446 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP', 'URGCP|p.T809Rfs*37|1|0.17|ENSG00000106608|chr7:43877038-43877038|T/-|frameshift_variant'] 6241 6228 APRGTGIVSA True PC9_epitope_Rep5 927.5137793295098 927.51268993586 28.935 2 0.05944932742766654 0.004645675097706659 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 9038 22173 AVIGGLVYL True PC9_epitope_Rep2 903.5429541994699 903.54184993586 90.776 2 0.05944206015968556 0.004645675097706659 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'MAGT1|p.R207T|1|0.83|ENSG00000102158|chrX:77856785-77856785|C/G|missense_variant'] 34702 12779 GQMDPSAQI True PC9_epitope_Rep1 945.4225813666098 945.42148993586 54.028 2 0.059433393100333735 0.004645675097706659 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000493446.1_1_7:1510215-1510538:-|nuORF'] 91144 13844 RLPEAIEEV True PC9_epitope_Rep4 1054.56587447202 1054.56476993586 61.152 2 0.05940697960128669 0.004645675097706659 0.9438714419765777 ['ENST00000493368.5_1_9:37422710-37428742:+|nuORF', 'ENSG00000137106|ENST00000318158|GRHPR', 'ENST00000460882.5_1_9:37422710-37436776:+|nuORF', 'ENST00000377824.8_1_9:37422741-37431094:+|nuORF'] 44515 23571 IPADIVFVL True PC9_epitope_Rep5 985.58481901145 985.58427496793 95.651 1 0.059403347847503306 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1', 'ENST00000429417.1_1_2:192746108-192746309:-|nuORF', 'nc|ENSG00000137094|O75953|DNAJB5', 'DNAJB5|p.C292Afs*10|2|0.11|ENSG00000137094|chr9:34997083-34997083|C/-|frameshift_variant', 'ENSG00000137094|ENST00000682809|DNAJB5', 'nc|ENSG00000137094|O75953-5|DNAJB5'] 109725 10072 THGHTPIIL True PC9_epitope_Rep5 987.5501648382299 987.54906993586 43.723 2 0.05940147751345822 0.004645675097706659 0.9438714419765777 ['ENSG00000124177|ENST00000373233|CHD6'] 21205 13275 ERFEKTFQL True PC9_epitope_Rep2 1196.6189726740397 1196.6178699358602 56.34 2 0.059401374509855824 0.004645675097706659 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 1915 4574 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 22.699 2 0.05939829268459808 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 104415 14246 SSIEHLTTL True PC9_epitope_Rep5 999.52367530687 999.52256993586 59.803 2 0.05939006539367925 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 30333 11804 GADQTTLLY True H1975_Epitope_Rep2 980.4814761417199 980.48036993586 50.48 2 0.05938045072212114 0.004645675097706659 0.9438714419765777 ['ENSG00000075539|ENST00000358350|FRYL'] 39181 6617 HLGALLAR True NCI_RA007_Epitope_Rep4 849.51847078713 849.51736993586 32.08 2 0.05937654969050925 0.004645675097706659 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 96910 7347 SETKIFTA True NCI_RA007_Epitope_Rep2 895.4650978015899 895.46400993586 33.201 2 0.05937589415601942 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 28034 16447 FRAPQVMTY True PC9_epitope_Rep3 1111.54845058607 1111.5473499358602 68.4 2 0.059371987722379366 0.004645675097706659 0.9438714419765777 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263'] 136573 9087 YHTDTTVKF True PC9_epitope_Rep1 1110.53457434374 1110.53346993586 39.805 2 0.059371468652810414 0.004645675097706659 0.9438714419765777 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 89682 4576 REWEEAERQA True NCI_RA007_Epitope_Rep4 1302.59527710734 1302.5941899358602 24.007 2 0.059366390496917214 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 116242 18159 TVVAAIQAV True PC9_epitope_Rep3 870.51746772762 870.51636993586 75.049 2 0.059355121203859953 0.004645675097706659 0.9438714419765777 ['ENSG00000170265|ENST00000610704|ZNF282', 'nc|ENSG00000170265|Q9UDV7-2|ZNF282'] 81269 5194 PPPPPIAR True NCI_RA007_Epitope_Rep2 843.49667271339 843.49556993586 24.823 2 0.05935325507347044 0.004645675097706659 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF', 'ENST00000525816.1_1_11:84732145-84732388:-|nuORF'] 115721 19503 TVLGKIWKL True PC9_epitope_Rep5 1056.66955169492 1056.66844993586 80.071 2 0.05934407334665804 0.004645675097706659 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENST00000484846.1_1_11:64621807-64623066:-|nuORF'] 40246 13614 HRIQDLEQL True PC9_epitope_Rep1 1150.6094706195 1150.60783490379 57.222 3 0.0593429857257864 0.004645675097706659 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 29313 12552 FVDPSQDHAL True PC9_epitope_Rep1 1127.52473793603 1127.52364993586 53.15 2 0.05933817622213308 0.004645675097706659 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 43458 4992 IHSSSTVL True PC9_epitope_Rep4 842.44978209062 842.44868993586 25.814 2 0.05933813582146685 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 112859 11793 TPNRATFVV True PC9_epitope_Rep1 1003.5450794577899 1003.5439899358599 50.232 2 0.05933171131418436 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 2257 6065 AEPAKIEAFR True NCI_RA007_Epitope_Rep4 1130.6084079903399 1130.6067749037902 29.945 3 0.05932000007208103 0.004645675097706659 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 64121 12316 LQEEQFVNAVE True H1975_Epitope_Rep3 1304.6248459001201 1304.6237499358601 52.556 2 0.05931700418310569 0.004645675097706659 0.9438714419765777 ['ENSG00000146281|ENST00000275072|PM20D2'] 74202 18362 NIANHFFTV True PC9_epitope_Rep4 1061.52942939365 1061.52832993586 78.696 2 0.0593099681472835 0.004645675097706659 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 135066 22821 YALDLSTFL True PC9_epitope_Rep4 1041.53826274185 1041.5371699358602 96.003 2 0.059301877019613695 0.004645675097706659 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 27516 20316 FPFAPPAAA True PC9_epitope_Rep5 887.4541391950698 887.45304993586 83.191 2 0.05929649845687905 0.004645675097706659 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 384 5178 AALEDKNSL True NCI_RA007_Epitope_Rep3 959.49237517859 959.49126993586 27.359 2 0.059290254726959764 0.004645675097706659 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA1-ALDH3B1|1|fusion'] 105948 20470 SVLGAITSV True PC9_epitope_Rep2 845.48583324617 845.48472993586 84.167 2 0.05929019888007036 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000120705|P62495-2|ETF1', 'ENSG00000120705|ENST00000360541|ETF1'] 97921 17707 SHNPLANIL True PC9_epitope_Rep4 977.52942939365 977.52832993586 76.134 2 0.05929009911877829 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 102696 16249 SQDPTMIGV True PC9_epitope_Rep2 946.44298245802 946.44188993586 67.745 2 0.05928178971487074 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 76208 11285 NRWKQSVEL True PC9_epitope_Rep5 1158.61455599994 1158.6134499358602 48.4 2 0.05926970623137093 0.004645675097706659 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 6524 11787 APVAEVPTA True PC9_epitope_Rep1 853.4545331178899 853.4539849679301 50.209 1 0.05926920754495583 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 97566 12113 SGVSLAALK True PC9_epitope_Rep3 844.50181766348 844.50072993586 51.636 2 0.05924931663859983 0.004645675097706659 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 130408 10860 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 49.778 2 0.05923264122950329 0.004645675097706659 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 88977 3808 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 19.664 2 0.059226833290489056 0.004645675097706659 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 99691 10416 SLGEISALTSK True NCI_RA007_Epitope_Rep2 1104.60265390356 1104.60154993586 45.108 2 0.0592077147468157 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 70380 15351 LYQEIIHYF True NCI_RA007_Epitope_Rep5 1224.61791004488 1224.6168099358601 65.752 2 0.05920246682392486 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 70948 9232 MEMPSQPAP True H1975_Epitope_Rep2 986.4201388384598 986.41904993586 40.467 2 0.05919904537987381 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.D632Efs*4|1|0.14|ENSG00000048028|chr11:113812336-113812352|TCAGGCCTCCATAGGAA/-|frameshift_variant'] 120593 11851 VGAGAPVYL True H1975_Epitope_Rep3 845.46470387877 845.4641549679301 50.732 1 0.05919807753880899 0.004645675097706659 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 23009 16394 EVISKLYAV True PC9_epitope_Rep5 1020.5855472874398 1020.5849749679301 68.057 1 0.059196222689351916 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 57287 7252 LEGGQTPIA True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 32.829 2 0.05919615110252007 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1'] 2454 5806 AEQMHPAPYEA True H1975_Epitope_Rep2 1242.5339227207398 1242.53282993586 27.323 2 0.059192373276246456 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2'] 112915 11872 TPQPPLLKA True PC9_epitope_Rep5 963.5753169569099 963.57420993586 50.664 2 0.05917017945776713 0.004645675097706659 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 21353 14305 ERLKLVTVL True PC9_epitope_Rep6 1069.68593003505 1069.68482993586 66.922 2 0.059168870868176404 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000029364|Q9NUM3-3|SLC39A9', 'nc|ENSG00000029364|Q9NUM3-2|SLC39A9', 'ENSG00000029364|ENST00000336643|SLC39A9', 'ENST00000554059.1_1_14:69866086-69895394:+|nuORF', 'ENST00000555245.5_1_14:69865254-69925307:+|nuORF', 'ENST00000556125.5_1_14:69864828-69908619:+|nuORF'] 6861 14706 AQIEVVPSA True PC9_epitope_Rep5 912.4916469025999 912.49109496793 61.571 1 0.05916700260827889 0.004645675097706659 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 113212 20420 TQDSSILPL True PC9_epitope_Rep2 972.5127762699999 972.51166993586 83.973 2 0.059152749763391625 0.004645675097706659 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 53691 19641 KYAMMFAEL True PC9_epitope_Rep4 1102.51912460374 1102.51802993586 83.667 2 0.05913262746020616 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 44714 12629 IPPPVPPSA True PC9_epitope_Rep2 873.4960040070499 873.49490993586 53.886 2 0.059129326229833155 0.004645675097706659 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4', 'nc|ENSG00000120875|Q13115-2|DUSP4'] 8666 19815 AVATDFFTV True PC9_epitope_Rep6 969.48074786573 969.47964993586 88.878 2 0.05912833299458063 0.004645675097706659 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 91849 12712 RPNGVITGLAA True PC9_epitope_Rep5 1067.60874234351 1067.60764993586 53.902 2 0.059119938021362645 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1', 'nc|ENSG00000122068|Q96QD9-4|FYTTD1'] 102360 5357 SPVFTSRSAA True PC9_epitope_Rep6 1021.51925863277 1021.51816993586 28.465 2 0.059119582607704536 0.004645675097706659 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 1192 8076 AEDDLNTVAA True H1975_Epitope_Rep3 1017.46146897313 1017.4608749679301 36.038 1 0.05911678406749998 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 6069 14069 APMPPIIHA True PC9_epitope_Rep2 945.51060852537 945.50950993586 59.393 2 0.05911192582824311 0.004645675097706659 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 35809 19175 GTYDIFYTA True PC9_epitope_Rep6 1049.47057710485 1049.46948993586 86.409 2 0.059110459056085994 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 2684 11708 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 50.11 1 0.05909956595806679 0.004645675097706659 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 135758 6591 YEMLANRTA True H1975_Epitope_Rep3 1067.5069796969099 1067.50588993586 30.306 2 0.059096026127764274 0.004645675097706659 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B'] 27512 20358 FPFAPPAAA True PC9_epitope_Rep3 887.4541391950698 887.45304993586 83.556 2 0.05909527456046039 0.004645675097706659 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 8939 13437 AVGPIVQL True H1975_Epitope_Rep1 795.48543932335 795.48489496793 56.799 1 0.05907522484701972 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.K134Rfs*14|1|0.17|ENSG00000112531|chr6:163478888-163478888|A/-|frameshift_variant'] 109864 13447 THMPSVVGV True PC9_epitope_Rep3 925.4691376362099 925.46804993586 56.769 2 0.05906035787267326 0.004645675097706659 0.9438714419765777 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 6431 9536 APSGNYVAC True PC9_epitope_Rep5 880.3749028981999 880.37380993586 41.639 2 0.059045283358334526 0.004666047784238042 0.9438714419765777 ['ENSG00000114450|ENST00000232564|GNB4'] 132593 11398 VYPPPHQVF True PC9_epitope_Rep4 1082.5549158654999 1082.55380993586 51.613 2 0.05903843469543904 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 72850 9149 NAMEDAQTL True NCI_RA007_Epitope_Rep5 991.42806066987 991.42696993586 41.84 2 0.059035538142054186 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000196975|P09525|ANXA4', 'ENSG00000196975|ENST00000394295|ANXA4'] 23003 15714 EVISKLYAV True PC9_epitope_Rep2 1020.5855472874398 1020.58444993586 65.718 2 0.059018552200092556 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 83894 10177 QEIKELMAEA True H1975_Epitope_Rep2 1160.5747249035599 1160.57362993586 44.148 2 0.059015011549878864 0.004666047784238042 0.9438714419765777 ['ENSG00000109079|ENST00000226225|TNFAIP1'] 130285 12531 VTTDIQVKV True PC9_epitope_Rep5 1001.5757108797299 1001.5746099358599 53.199 2 0.0590149159074527 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 27998 18113 FQVQGVQNL True PC9_epitope_Rep4 1031.5399940773498 1031.5388899358602 77.738 2 0.05901180240982937 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 5180 23153 ALPEIFTEL True PC9_epitope_Rep5 1031.55391280599 1031.55280993586 94.047 2 0.05900842984844521 0.004666047784238042 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 40362 4697 HRTELETKL True PC9_epitope_Rep2 1125.61422164677 1125.61258490379 23.437 3 0.058993122214096236 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 137114 15163 YLDDPTNSWY True H1975_Epitope_Rep3 1272.52988288612 1272.52878993586 63.726 2 0.058983149922872444 0.004666047784238042 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 89594 6177 RESLPSTVSA True H1975_Epitope_Rep3 1045.54038800017 1045.53928993586 28.77 2 0.05897292068531697 0.004666047784238042 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2'] 71000 9586 MEQQTLSIA True H1975_Epitope_Rep1 1019.4957463068699 1019.49464993586 41.797 2 0.05897237285314799 0.004666047784238042 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 17188 15786 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 65.537 2 0.05896940881334248 0.004666047784238042 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 95688 10888 SAYDGKDYI True PC9_epitope_Rep2 1030.46074069714 1030.4596499358602 47.198 2 0.058958653860702 0.004666047784238042 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 120278 15367 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 67.042 2 0.058957495176025644 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 108970 8117 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 36.171 2 0.058952591317157715 0.004666047784238042 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 32453 13745 GGHGPSFPL True PC9_epitope_Rep5 867.42390169595 867.42280993586 57.892 2 0.058947100101244154 0.004666047784238042 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 110022 9873 THTTPVLL True PC9_epitope_Rep6 880.5018176634799 880.50072993586 48.468 2 0.05893882685850451 0.004666047784238042 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 30094 22907 FYPAIADLF True PC9_epitope_Rep4 1055.5327834385898 1055.5322749679299 96.331 1 0.05893351567247705 0.004666047784238042 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 25923 11336 FGPALSVK True PC9_epitope_Rep2 817.46978925921 817.46868993586 48.924 2 0.0589291295415145 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 30616 6245 GALALEEK True PC9_epitope_Rep4 829.4545331178899 829.45342993586 31.066 2 0.05892562147471365 0.004666047784238042 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 89609 7953 RESVPDLAP True H1975_Epitope_Rep1 982.5083595958998 982.50726993586 35.539 2 0.05891755060620927 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000144580|Q92600-3|CNOT9', 'ENSG00000144580|ENST00000273064|CNOT9', 'nc|ENSG00000144580|Q92600-2|CNOT9'] 73744 7037 NHANGLTL True PC9_epitope_Rep4 838.4297153523801 838.42860993586 34.319 2 0.05891490138567821 0.004666047784238042 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 76634 7827 NTIDPSHPM True PC9_epitope_Rep4 1010.4491304676201 1010.44802993586 37.514 2 0.058902782556656784 0.004666047784238042 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 63886 21430 LPVLIPVAS True PC9_epitope_Rep5 907.5742543277499 907.57314993586 87.493 2 0.05890276354215019 0.004666047784238042 0.9438714419765777 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 46767 14264 IVCDVPSASA True PC9_epitope_Rep3 960.45863252216 960.45752993586 59.95 2 0.058898393215228655 0.004666047784238042 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 27815 17659 FQGVEFHYV True PC9_epitope_Rep4 1124.5290950404801 1124.5279899358602 75.951 2 0.05888696012616667 0.004666047784238042 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 74048 11514 NHSGAVVLL True PC9_epitope_Rep4 908.50796567308 908.50686993586 52.051 2 0.05888203930597448 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 64061 16319 LQDQNTYTL True PC9_epitope_Rep3 1094.52440358286 1094.5233099358602 67.908 2 0.05885983622984112 0.004666047784238042 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 96215 7902 SEELTVTNA True H1975_Epitope_Rep2 962.4556553167 962.4551049679301 35.342 1 0.058858055334007724 0.004666047784238042 0.9438714419765777 ['ENSG00000237649|ENST00000428849|KIFC1'] 110372 23687 TILPAIILV True PC9_epitope_Rep5 951.63685458431 951.63574993586 96.09 2 0.05885595255523565 0.004666047784238042 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 84548 11546 QHAVEAISL True PC9_epitope_Rep4 966.5134449763399 966.51234993586 52.174 2 0.05885226051340706 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000182923|Q96MT8-4|CEP63', 'nc|ENSG00000182923|Q96MT8-3|CEP63'] 35372 15958 GTASGFYTV True PC9_epitope_Rep2 901.4181476091701 901.4175949679301 66.634 1 0.058847302958551666 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 10120 19093 AYYPAQGVQQF True PC9_epitope_Rep1 1270.59823722946 1270.5971499358602 78.231 2 0.05884179514860006 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 35008 9655 GRAPGGLSL True PC9_epitope_Rep4 826.4661008611 826.4650099358599 44.763 2 0.05884082531824203 0.004666047784238042 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 47444 19396 IYILDPELL True NCI_RA007_Epitope_Rep3 1087.61651306255 1087.61540993586 84.649 2 0.05883090637015857 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 47783 9833 IYQRDPLKL True PC9_epitope_Rep6 1144.6604435631998 1144.65880490379 48.29 3 0.05882924264094199 0.004666047784238042 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 140760 16260 YYQSSVQYL True PC9_epitope_Rep6 1149.5342399905699 1149.5331499358601 74.908 2 0.05882801088097924 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 44100 8556 ILMEHIHKL True PC9_epitope_Rep6 1132.64268532408 1132.64104490379 42.678 3 0.05882044444787864 0.004666047784238042 0.9438714419765777 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF', 'ENSG00000108298|ENST00000225430|RPL19', 'ENST00000498753.1_1_3:141762467-141763034:-|nuORF'] 43251 19346 IHDGFGFM[Oxidation]L True PC9_epitope_Rep4 1051.4797027003501 1051.47860993586 82.524 2 0.05881934660704669 0.004666047784238042 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 64325 9221 LQNEPLPERL True NCI_RA007_Epitope_Rep3 1207.6560864587498 1207.6549899358602 43.367 2 0.05880203912402641 0.004666047784238042 0.9438714419765777 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 15106 11421 EADVAQLEY True H1975_Epitope_Rep2 1036.47130538084 1036.47020993586 48.983 2 0.05880070819393248 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 75899 5893 NRDRTQIAL True PC9_epitope_Rep2 1085.59415490853 1085.59304993586 28.06 2 0.0587914115929435 0.004666047784238042 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 31473 10214 GEELAGAIAA True H1975_Epitope_Rep2 900.4552613938798 900.45471496793 44.293 1 0.05878952099689956 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 28761 16822 FTAQVLIL True H1975_Epitope_Rep2 903.5429541994698 903.5424049679301 69.952 1 0.058789440346459255 0.004666047784238042 0.9438714419765777 ['ENST00000447052.1_1_21:24762753-24763314:+|nuORF'] 32989 10295 GIVEFSGK True PC9_epitope_Rep3 835.44396843419 835.44286993586 44.548 2 0.05878729492872672 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 71106 8578 METGTGLTP True H1975_Epitope_Rep3 905.4164333570099 905.4158849679301 37.986 1 0.05878161984664342 0.004666047784238042 0.9438714419765777 ['ENSG00000068489|ENST00000262293|PRR11'] 132577 22395 VYPNWAIGL True PC9_epitope_Rep3 1031.5440168286298 1031.54290993586 91.422 2 0.05875478964621108 0.004666047784238042 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 74337 22462 NIPPYFVAL True PC9_epitope_Rep2 1032.56441792004 1032.56332993586 91.889 2 0.05874494549338169 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 26724 15696 FLDGNELTL True NCI_RA007_Epitope_Rep3 1020.51277627 1020.51227496793 69.374 1 0.058741477214847015 0.004666047784238042 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 96757 10044 SEQPPNSVLP True H1975_Epitope_Rep2 1066.5294889633 1066.52838993586 43.627 2 0.05873428596850086 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000241839|Q8TD55-2|PLEKHO2', 'ENSG00000241839|ENST00000323544|PLEKHO2'] 32011 5917 GETVPAPSA True H1975_Epitope_Rep2 827.40249754503 827.40194496793 27.747 1 0.058724025961214114 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 26843 21616 FLEQELETI True PC9_epitope_Rep5 1120.56520576568 1120.5641099358602 88.186 2 0.05871689675305862 0.004666047784238042 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 31632 5512 GEGSPPAVAA True H1975_Epitope_Rep2 854.4133965818999 854.41284496793 26.214 1 0.05871376243317377 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17'] 31347 9345 GEALPHVVP True H1975_Epitope_Rep2 917.49706663621 917.49596993586 40.907 2 0.05869866379402818 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 138216 10862 YQTEIGQTL True NCI_RA007_Epitope_Rep5 1051.51858992643 1051.51748993586 48.417 2 0.058694913832421196 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 107952 14210 TAYLDGVSL True NCI_RA007_Epitope_Rep3 937.47566248529 937.47456993586 63.201 2 0.05868833676001456 0.004666047784238042 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 17084 9655 EGRDTHYLI True PC9_epitope_Rep2 1102.54072235334 1102.5396299358601 42.477 2 0.05866294957072955 0.004666047784238042 0.9438714419765777 ['TENM1|p.F2575L|1|0.89|ENSG00000009694|chrX:124380991-124380991|A/G|missense_variant'] 8668 18848 AVATFLQSV True PC9_epitope_Rep6 934.5123823471798 934.51128993586 85.145 2 0.05865784783853102 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 47787 6718 IYQRHVYNL True NCI_RA007_Epitope_Rep4 1204.6352914445197 1204.6336349037902 32.464 3 0.058655613118656545 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 32779 10091 GIDIFTGK True H1975_Epitope_Rep1 849.45961849833 849.45852993586 43.751 2 0.05863214146307332 0.004666047784238042 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 92209 3204 RQHNTEIRM True NCI_RA007_Epitope_Rep2 1183.5880239822698 1183.58638490379 17.11 3 0.05862880180781531 0.004666047784238042 0.9438714419765777 ['FKBP15|p.G1133Vfs*45|2|0.29|ENSG00000119321|chr9:113169311-113169311|C/-|frameshift_variant', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'ENSG00000119321|ENST00000238256|FKBP15'] 35733 4420 GTSSVIVSR True NCI_RA007_Epitope_Rep4 904.4977949122 904.49668993586 23.363 2 0.058627527996081535 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 26287 16272 FIDDANYSV True PC9_epitope_Rep6 1042.4607406971402 1042.4596499358602 74.954 2 0.058622499422624944 0.004666047784238042 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 137122 19215 YLDEIVKEV True PC9_epitope_Rep5 1106.58594121026 1106.5848499358601 78.951 2 0.05861260949614682 0.004666047784238042 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant', 'nc|ENSG00000047410|P12270-2|TPR'] 78176 6555 PAPPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 31.825 2 0.0586119199101972 0.004666047784238042 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 25201 8610 FEADPPGQVA True H1975_Epitope_Rep2 1029.47672511445 1029.47562993586 38.075 2 0.05860480353459677 0.004666047784238042 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 123690 6270 VIPELNGK True NCI_RA007_Epitope_Rep3 868.50181766348 868.50072993586 31.666 2 0.05859833267523695 0.004666047784238042 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 103946 17445 SRPPLVVF True PC9_epitope_Rep2 913.53853752537 913.53744993586 72.355 2 0.05857739960529101 0.004666047784238042 0.9438714419765777 ['TMEM248|p.R131Pfs*40|1|0.15|ENSG00000106609|chr7:66945204-66945205|-/C|frameshift_variant', 'nc|ENSG00000106609|Q9NWD8-2|TMEM248', 'ENSG00000106609|ENST00000341567|TMEM248'] 72924 14257 NAYTGVVYL True H1975_Epitope_Rep2 998.5072969667399 998.50618993586 59.99 2 0.05857550750534164 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 116901 14764 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47054993586 61.609 2 0.058551881441748534 0.004666047784238042 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 140107 22096 YVPPELITL True PC9_epitope_Rep3 1043.59029831471 1043.58920993586 90.289 2 0.0585385546905506 0.004666047784238042 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 107258 14782 SYPSAFSKL True PC9_epitope_Rep2 998.50729696674 998.50618993586 62.122 2 0.058527979968849085 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1', 'MARF1|p.A871Lfs*9|2|0.2|ENSG00000166783|chr16:15621761-15621761|C/-|frameshift_variant'] 6081 14788 APMPPIIHA True PC9_epitope_Rep5 945.51060852537 945.50950993586 61.882 2 0.05852486357464098 0.004666047784238042 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 136420 16451 YHFPDQQEL True PC9_epitope_Rep3 1175.52473793603 1175.52364993586 68.417 2 0.05852235711512363 0.004666047784238042 0.9438714419765777 ['ENSG00000165490|ENST00000533655|DDIAS'] 1507 6909 AEEPNAAVP True H1975_Epitope_Rep3 896.4239612655998 896.42286993586 31.535 2 0.05850060734942702 0.004666047784238042 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'HSP90AB1|p.E707K|1|0.33|ENSG00000096384|chr6:44253542-44253542|G/A|missense_variant'] 118083 6724 VATVSLPR True NCI_RA007_Epitope_Rep3 841.5021520166499 841.50104993586 33.537 2 0.058480887953796856 0.004666047784238042 0.9438714419765777 ['CON__P00761'] 123269 12378 VHQLSVTL True PC9_epitope_Rep4 895.51271670035 895.51160993586 55.419 2 0.058476949535853064 0.004666047784238042 0.9438714419765777 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000485075.1_1_15:78562865-78566840:+|nuORF', 'ENST00000399417.3_1_X:106595227-106595875:-|nuORF', 'nc|ENSG00000086061|P31689-2|DNAJA1', 'ENSG00000086061|ENST00000330899|DNAJA1'] 36302 5081 GVGPVPARA True PC9_epitope_Rep4 822.47118624154 822.47008993586 26.194 2 0.05847371790376715 0.004666047784238042 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 63809 11762 LPSRFIESA True PC9_epitope_Rep4 1018.5447451046199 1018.54364993586 53.009 2 0.05846776393747512 0.004666047784238042 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 88967 3085 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 16.264 2 0.05845906365868692 0.004666047784238042 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 27958 15944 FQSDTNAML True PC9_epitope_Rep3 1025.4487961144498 1025.4476899358601 66.475 2 0.05845305751903191 0.004666047784238042 0.9438714419765777 ['ENSG00000127337|ENST00000247843|YEATS4'] 28674 12602 FSSSAGPGL True PC9_epitope_Rep1 821.3919328613299 821.39082993586 53.342 2 0.05843861227703656 0.004666047784238042 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 9805 11337 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 51.385 2 0.058436968977351726 0.004666047784238042 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 37824 10996 HDGITVAV True PC9_epitope_Rep5 810.42356734278 810.42246993586 47.285 2 0.058419964792752486 0.004666047784238042 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5'] 48364 8178 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54861496793 36.407 1 0.05841813665468138 0.004666047784238042 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 17222 15755 EHAGVISVL True PC9_epitope_Rep5 923.5076313199099 923.50708496793 65.599 1 0.058414370159370045 0.004666047784238042 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 136134 15825 YGGLIFNSY True H1975_Epitope_Rep3 1032.4916469026 1032.4905499358601 66.32 2 0.05841150425373165 0.004666047784238042 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 115622 22586 TVISILNTI True PC9_epitope_Rep3 972.58554728744 972.58444993586 92.148 2 0.058405480550613134 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 40018 17206 HQTIVVQLL True PC9_epitope_Rep6 1049.62332977849 1049.62222993586 78.772 2 0.058402031967440114 0.004666047784238042 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 112967 20215 TPSIPVLTA True PC9_epitope_Rep3 897.51713337445 897.51602993586 83.015 2 0.058389908005463315 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 8816 18787 AVFPHLTVV True PC9_epitope_Rep4 981.5647522732099 981.56364993586 80.349 2 0.058380870240208424 0.004666047784238042 0.9438714419765777 ['ENSG00000134825|ENST00000537328|TMEM258'] 86149 6954 QPRYPVNSV True PC9_epitope_Rep6 1058.55089311422 1058.5497899358602 35.698 2 0.05837143073025024 0.004666047784238042 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 7666 4857 [Acetylation]-ASNVTNKTD True PC9_epitope_Rep3 990.4618036426001 990.46070993586 23.78 2 0.05836592566763537 0.004666047784238042 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 58174 5263 LESKSVVP True H1975_Epitope_Rep2 857.4858332461699 857.48472993586 25.312 2 0.05835297315515006 0.004666047784238042 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000546204.1_1_6:160200657-160201127:-|nuORF'] 128486 21951 VSFGDFVQV True PC9_epitope_Rep2 996.4916469025999 996.49054993586 89.909 2 0.0583456294532534 0.004666047784238042 0.9438714419765777 ['ENSG00000166263|ENST00000376352|STXBP4', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 84915 11629 QHSVPLQL True PC9_epitope_Rep4 920.50796567308 920.50686993586 52.488 2 0.0583456029707678 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 2836 8215 AEVPDVTAT True H1975_Epitope_Rep1 901.43927697657 901.43872496793 36.542 1 0.05832023123931991 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 103123 10085 SQLSKLQEV True PC9_epitope_Rep2 1030.56587447202 1030.56476993586 44.122 2 0.058305773700404455 0.004666047784238042 0.9438714419765777 ['ENST00000472011.5_1_1:235582749-235612074:+|nuORF', 'nc|ENSG00000285053|Q15813|TBCE', 'nc|ENSG00000285053|Q15813-2|TBCE'] 74044 12897 NHSGAVVLL True PC9_epitope_Rep1 908.50796567308 908.50686993586 54.481 2 0.05830048726066725 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 131647 24146 VWFPDMMPTW True PC9_epitope_Rep5 1308.5671374253197 1308.5660299358601 97.864 2 0.05829808853000606 0.004666047784238042 0.9438714419765777 ['ENSG00000005812|ENST00000355619|FBXL3'] 74027 8393 NHSDYNM[Oxidation]VL True PC9_epitope_Rep4 1107.46550918819 1107.4644099358602 39.745 2 0.058298028636728096 0.004666047784238042 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 100103 18931 SLLAAALLY True H1975_Epitope_Rep3 933.55351888317 933.55297496793 79.387 1 0.05829686862077263 0.004666047784238042 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3'] 1239 16235 AEDLNLLIA True H1975_Epitope_Rep2 970.53351171458 970.5329649679301 67.657 1 0.05827208990870137 0.004666047784238042 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 5623 5799 APAEEPAAAAA True PC9_epitope_Rep4 967.4610750503098 967.45996993586 29.162 2 0.05827104835894206 0.004666047784238042 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 98639 8975 SIPGGPVRL True H1975_Epitope_Rep1 894.52870111766 894.52760993586 39.427 2 0.05826984198684747 0.004666047784238042 0.9438714419765777 ['CON__P12763'] 45082 6791 IQRTPKIQVY True H1975_Epitope_Rep3 1244.7241064489199 1244.72245490379 31.077 3 0.058266935378314934 0.004666047784238042 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 102494 7469 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 36.084 2 0.0582442626192247 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 43087 15513 IGLFGGAGVGK True PC9_epitope_Rep2 974.5549158654998 974.55380993586 64.946 2 0.05822676797747189 0.004666047784238042 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 7034 13794 AQSGTIMAV True PC9_epitope_Rep5 876.43750315476 876.43640993586 58.078 2 0.05822612984258529 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3'] 136172 19906 YGIENEVFL True PC9_epitope_Rep6 1082.52842633414 1082.52732993586 89.223 2 0.058225221877265275 0.004666047784238042 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 108566 9214 TEHFLTAVA True H1975_Epitope_Rep1 987.5025459394699 987.50144993586 40.351 2 0.05821656442144288 0.004666047784238042 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L'] 1187 7945 AEDDLNTVAA True H1975_Epitope_Rep2 1017.46146897313 1017.4608749679301 35.508 1 0.05820078838021961 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 85081 20050 QIPVKWIGV True PC9_epitope_Rep1 1038.6226015024997 1038.62150993586 81.948 2 0.058195645244567176 0.004666047784238042 0.9438714419765777 ['ENSG00000035687|ENST00000366535|ADSS2'] 89602 5440 RESPFSTSA True NCI_RA007_Epitope_Rep5 980.45632402304 980.45522993586 27.613 2 0.05818491270261258 0.004666047784238042 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 114067 16715 TRPPALLL True PC9_epitope_Rep5 879.5541875895099 879.55308993586 69.3 2 0.058181824162022874 0.004666047784238042 0.9438714419765777 ['ENSG00000090971|ENST00000205194|NAT14'] 1188 7955 AEDDLNTVAA True H1975_Epitope_Rep2 1017.46146897313 1017.46036993586 35.547 2 0.05817609243829633 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 109836 18834 THLLGVAL True PC9_epitope_Rep1 822.49633836022 822.49524993586 77.229 2 0.0581685176364929 0.004666047784238042 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 31313 5989 GEAAGSPVP True H1975_Epitope_Rep3 783.37628279719 783.37573496793 28.049 1 0.05816170137427693 0.004666047784238042 0.9438714419765777 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 37855 4484 HDPSAVAV True PC9_epitope_Rep6 794.3922672145001 794.39116993586 24.448 2 0.05815680661168688 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 86229 16121 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.46262993586 66.825 2 0.05814321735904761 0.004666047784238042 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 41021 18234 HYGLPVVV True PC9_epitope_Rep5 882.49633836022 882.49578496793 75.15 1 0.05813746009598713 0.004666047784238042 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 120331 16529 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 68.581 2 0.05813041118471175 0.004666047784238042 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 63540 22157 LPLAGDAVI True PC9_epitope_Rep2 867.50656869075 867.5060249679301 90.713 1 0.05812963552238321 0.004666047784238042 0.9438714419765777 ['ENST00000521369.2_1_8:107282449-107284274:+|nuORF'] 104972 22523 STIANVWLV True PC9_epitope_Rep1 1001.55458151233 1001.55348993586 91.436 2 0.05811500173681553 0.004666047784238042 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 139241 4992 YTAPPLQSK True NCI_RA007_Epitope_Rep3 1003.53384606775 1003.53274993586 26.635 2 0.058109971776693484 0.004666047784238042 0.9438714419765777 ['ENSG00000155008|ENST00000373173|APOOL'] 46735 12984 IVAPGKGILAA True PC9_epitope_Rep4 1008.6331661861998 1008.63206993586 57.836 2 0.05810531031894949 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 87451 9246 QTESDYSYY True H1975_Epitope_Rep2 1154.44039917538 1154.4393099358601 40.522 2 0.058090732974586265 0.004666047784238042 0.9438714419765777 ['ENSG00000102595|ENST00000376747|UGGT2', 'nc|ENSG00000102595|Q9NYU1-2|UGGT2', 'UGGT2|p.W307Lfs*14|1|0.21|ENSG00000102595|chr13:95989983-95989984|CC/A|frameshift_variant'] 127623 13806 VRDGATLIL True PC9_epitope_Rep4 956.5654805492 956.56438993586 61.0 2 0.05808924463668339 0.004666047784238042 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 727 16127 AAVPGKTFVNI True PC9_epitope_Rep1 1115.63389446219 1115.63278993586 66.849 2 0.05807742282224137 0.004666047784238042 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 6014 7227 APLLQPRAA True PC9_epitope_Rep6 935.5552502186699 935.55414993586 36.909 2 0.0580556451843882 0.004666047784238042 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 109008 3297 TEVSKTPEA True H1975_Epitope_Rep1 960.47639076128 960.47528993586 16.742 2 0.05804819031992466 0.004666047784238042 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.R76W|1|0.36|ENSG00000102316|chrX:54809902-54809902|C/T|missense_variant'] 76401 8416 NSLPDTVQIR True NCI_RA007_Epitope_Rep5 1141.6091362663299 1141.60802993586 39.048 2 0.058039662042717634 0.004666047784238042 0.9438714419765777 ['ENSG00000242372|ENST00000374450|EIF6'] 38185 20758 HESDWQWAL True PC9_epitope_Rep1 1170.50942222506 1170.50832993586 84.674 2 0.058029965486098074 0.004666047784238042 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 108792 5861 TEQEVAQVA True H1975_Epitope_Rep2 973.4716397340098 973.47054993586 27.53 2 0.05802750753319933 0.004666047784238042 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 96382 8480 SEHGLVVIA True NCI_RA007_Epitope_Rep3 923.5076313199099 923.50652993586 40.433 2 0.05801875531508145 0.004666047784238042 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 21209 10687 ERFHHVTVL True PC9_epitope_Rep5 1136.60907669668 1136.60743490379 46.098 3 0.058001841139529255 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF', 'SFI1|p.E436Afs*118|1|0.1|ENSG00000198089|chr22:31583929-31583930|AG/-|frameshift_variant'] 61976 17110 LLLPGELAK True PC9_epitope_Rep3 952.5957180483199 952.59462993586 70.966 2 0.05797825847070198 0.004666047784238042 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 118640 5154 VEAPPPSSP True H1975_Epitope_Rep3 879.43379767331 879.43270993586 24.928 2 0.05797412453733162 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 103695 11768 SRDSSILIA True PC9_epitope_Rep1 960.52400966004 960.52290993586 50.138 2 0.057970917544605746 0.004666047784238042 0.9438714419765777 ['ENST00000327320.8_2_11:85989390-85989564:+|nuORF', 'ENST00000528250.1_1_11:85988947-85989564:+|nuORF', 'ENSG00000074266|ENST00000263360|EED', 'nc|ENSG00000074266|O75530-2|EED'] 28500 13530 FSGDPVYL True H1975_Epitope_Rep2 896.4279840168799 896.42743496793 57.179 1 0.05796976182170283 0.004666047784238042 0.9438714419765777 ['ENSG00000242732|ENST00000609883|RTL5'] 39613 9065 HPLLGVSA True PC9_epitope_Rep6 792.4493881678001 792.4488349679301 44.932 1 0.057964114043519345 0.004666047784238042 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 21586 5577 ERSGVNSEL True PC9_epitope_Rep5 989.47778774361 989.47668993586 26.457 2 0.05796306933814082 0.004666047784238042 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 118904 5106 VEEPSNPEA True H1975_Epitope_Rep3 970.4243551884199 970.42324993586 24.751 2 0.05796087946506596 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 102486 6619 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 32.62 2 0.05795523366286559 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 125371 4641 VLSSIEQK True NCI_RA007_Epitope_Rep2 902.50729696674 902.50618993586 22.679 2 0.057954305218473286 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 77247 12821 NYIMKIHNF True PC9_epitope_Rep4 1178.5906497512199 1178.58901490379 57.178 3 0.05795308405284109 0.004666047784238042 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 75757 15873 NRAISVIL True PC9_epitope_Rep1 884.5443511817999 884.54324993586 65.864 2 0.05794412196308157 0.004666047784238042 0.9438714419765777 ['ENSG00000105856|ENST00000222574|HBP1', 'nc|ENSG00000105856|O60381-3|HBP1'] 30439 10603 GAGAPVYL True H1975_Epitope_Rep3 746.3962899657799 746.39574496793 45.853 1 0.05794006321804427 0.004666047784238042 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 88250 11748 QYESKVFYL True NCI_RA007_Epitope_Rep3 1175.5862755634298 1175.5851699358602 53.322 2 0.0579384584520505 0.004666047784238042 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 31728 12395 GEISGTIAI True H1975_Epitope_Rep2 859.46509780159 859.46454496793 52.762 1 0.05793760264206036 0.004666047784238042 0.9438714419765777 ['ENSG00000109536|ENST00000226798|FRG1', 'ENST00000514482.1_1_4:190862182-190882061:+|nuORF'] 7928 10217 ATDDVAQIY True H1975_Epitope_Rep2 994.46074069714 994.4596499358599 44.304 2 0.057911614128989236 0.004666047784238042 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 95585 4913 SASGPLHSV True PC9_epitope_Rep6 853.4293809992101 853.42828993586 26.452 2 0.05790777590317488 0.004666047784238042 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 76275 10767 NSDPGLAVGY True H1975_Epitope_Rep2 991.46107505031 991.46052496793 46.445 1 0.05790540049483041 0.004666047784238042 0.9438714419765777 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 86207 9566 QPVSGTQVV True PC9_epitope_Rep1 913.48689587533 913.48578993586 41.654 2 0.057901154586909316 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 42581 7600 IESRTLAIA True H1975_Epitope_Rep2 972.5603951687599 972.55928993586 34.186 2 0.05789644123100243 0.004666047784238042 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 103591 9217 SRDKSFLL True PC9_epitope_Rep4 964.5341804209199 964.53308993586 43.051 2 0.05788784344737444 0.004666047784238042 0.9438714419765777 ['ENST00000563040.5_1_16:30007580-30010601:+|nuORF', 'nc|ENSG00000169592|Q8NBZ0-2|INO80E', 'ENSG00000169592|ENST00000563197|INO80E'] 46870 13843 IVGPDGLVY True H1975_Epitope_Rep2 931.50148331031 931.5009349679301 58.394 1 0.057887485559495126 0.004666047784238042 0.9438714419765777 ['ENSG00000105202|ENST00000221801|FBL'] 105793 21862 SVIIPGMTL True PC9_epitope_Rep2 929.52558988317 929.52448993586 89.567 2 0.05788146656529711 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 794 8012 ACFEPANQMVK True NCI_RA007_Epitope_Rep3 1236.56311467404 1236.56200993586 38.609 2 0.05787480285675226 0.004666047784238042 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C'] 38017 9365 HEIESLYTKL True NCI_RA007_Epitope_Rep5 1231.6448530687098 1231.6437499358601 42.664 2 0.05786406198767695 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 68689 14161 LVDDNYFY True H1975_Epitope_Rep2 1047.45492704071 1047.4543749679299 59.623 1 0.05786048923418605 0.004666047784238042 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 100102 19195 SLLAAALLY True H1975_Epitope_Rep2 933.55351888317 933.55297496793 79.672 1 0.057853021469527005 0.004666047784238042 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3'] 87961 11374 QVRDVIIAA True PC9_epitope_Rep2 983.5763795860698 983.57528993586 49.071 2 0.057851704487974526 0.004666047784238042 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 5805 19415 APFLASAVSA True PC9_epitope_Rep1 932.4967322830399 932.49562993586 79.49 2 0.05785008537924937 0.004666047784238042 0.9438714419765777 ['ENSG00000146242|ENST00000369750|TPBG', 'TPBG|p.L117Sfs*56|1|0.45|ENSG00000146242|chr6:82365309-82365327|GCTGGCGGAGCTGGCCGCG/-|frameshift_variant'] 36461 23417 GVISGLFEL True PC9_epitope_Rep1 933.5171333744499 933.51602993586 94.857 2 0.05783956199904279 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 140847 15127 YYTDIM[Oxidation]HTL True PC9_epitope_Rep3 1171.5219614351497 1171.5208699358602 63.325 2 0.057833455886382404 0.004666047784238042 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 91530 14835 RPADVIFAT True PC9_epitope_Rep3 988.5341804209199 988.53308993586 62.199 2 0.05782036774945471 0.004666047784238042 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 11817 10250 DHLPNAAL True PC9_epitope_Rep4 849.43446637965 849.43336993586 47.109 2 0.05779599913153976 0.004666047784238042 0.9438714419765777 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 44158 11458 ILQDRLNQV True PC9_epitope_Rep2 1097.61930702721 1097.61820993586 49.393 2 0.0577804706433455 0.004666047784238042 0.9438714419765777 ['ENSG00000094804|ENST00000209728|CDC6'] 2587 10626 AESEITIAP True H1975_Epitope_Rep2 929.4705771048499 929.46948993586 45.896 2 0.05777160111481143 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 17198 15010 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 62.99 2 0.057765441692705026 0.004666047784238042 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 47076 15882 IVVDNVPQV True PC9_epitope_Rep6 981.5494961318899 981.54838993586 73.369 2 0.05776537125115657 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 86140 8824 QPRYPVNSV True PC9_epitope_Rep1 1058.55089311422 1058.5497899358602 38.783 2 0.057763871115784446 0.004666047784238042 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 21572 16342 ERSGLQLSL True PC9_epitope_Rep5 1001.5505587610498 1001.54946993586 67.857 2 0.057760807520270754 0.004666047784238042 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 54723 8212 LAELEQER True PC9_epitope_Rep1 986.50327421546 986.50216993586 36.42 2 0.057757467268044344 0.004666047784238042 0.9438714419765777 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4'] 109720 20063 THFSFPLRL True PC9_epitope_Rep1 1116.60801406752 1116.6069099358601 81.998 2 0.05774525082236041 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 4545 5794 AKSKIRALL True NCI_RA007_Epitope_Rep4 998.6600496403798 998.65894993586 28.91 2 0.057726023699107606 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 99192 21988 SLASLLVSV True PC9_epitope_Rep4 887.5327834385901 887.5322349679301 92.797 1 0.05772015351295016 0.004666047784238042 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 118114 21250 VAVAGLLTV True PC9_epitope_Rep2 841.52730413533 841.5267549679301 87.199 1 0.05771985730461519 0.004666047784238042 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 139529 20176 YTLDGGDIINA True PC9_epitope_Rep5 1150.5506183307 1150.5495299358602 82.655 2 0.05771656382438732 0.004666047784238042 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 85123 7772 QISEVVVVK True NCI_RA007_Epitope_Rep4 999.5964463243099 999.59534993586 36.577 2 0.05770213717085313 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 87976 10169 QVRDVIIAA True PC9_epitope_Rep6 983.5763795860698 983.57528993586 49.745 2 0.05769168262880492 0.004666047784238042 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 113308 14202 TQIHSMVNL True PC9_epitope_Rep1 1041.52771514149 1041.52660993586 59.451 2 0.0576826510895717 0.004666047784238042 0.9438714419765777 ['ENST00000371873.9_1_1:47834144-47834267:+|nuORF'] 94686 12968 RYLEKPMEI True PC9_epitope_Rep5 1177.6165301458898 1177.61488490379 54.891 3 0.05767432477058469 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 108950 5551 TETQPPAAP True H1975_Epitope_Rep3 910.4396113297398 910.4390649679301 26.397 1 0.05767289712510876 0.004666047784238042 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 7970 15336 ATDLDVANFY True H1975_Epitope_Rep3 1127.51350454599 1127.51297496793 64.401 1 0.05767124321223768 0.004666047784238042 0.9438714419765777 ['ENSG00000142252|ENST00000270257|GEMIN7'] 118149 12911 VAVGVIKAV True PC9_epitope_Rep1 854.5589386167799 854.55784993586 54.535 2 0.057639892449003034 0.004666047784238042 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 13288 7676 DLYDAGVK True NCI_RA007_Epitope_Rep1 879.43379767331 879.43270993586 33.85 2 0.057636357444219 0.004666047784238042 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 113602 8272 TRATEGMVV True PC9_epitope_Rep1 962.4855159763398 962.48440993586 36.651 2 0.05763272667857745 0.004666047784238042 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 117842 6563 VAPEEHPVL True NCI_RA007_Epitope_Rep3 989.5181960036099 989.51708993586 32.869 2 0.05762687456839678 0.004666047784238042 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 118348 7908 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep2 964.4688036634799 964.46770993586 35.393 2 0.057624551910375965 0.004666047784238042 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 108895 12691 TESGNVFVV True H1975_Epitope_Rep2 950.4709114580199 950.4703649679301 53.918 1 0.05761212542765969 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF', 'LLGL2|p.G740Afs*31|1|0.09|ENSG00000073350|chr17:75571705-75571705|G/-|frameshift_variant', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2'] 110463 13062 TIPEAFRGV True PC9_epitope_Rep6 988.5341804209198 988.53308993586 61.849 2 0.05757741015077788 0.004666047784238042 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 84073 9113 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57797496793 40.042 1 0.05757099578841638 0.004666047784238042 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 64063 14149 LQDQNTYTL True PC9_epitope_Rep6 1094.52440358286 1094.5233099358602 66.295 2 0.05755708797663648 0.004666047784238042 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 103016 20841 SQIYPVVCV True PC9_epitope_Rep3 1006.5157534754599 1006.5151749679301 85.436 1 0.057549832198245665 0.004666047784238042 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 5867 15665 APGNPVLAV True PC9_epitope_Rep4 836.4756029156399 836.4745099358599 68.183 2 0.057547167685440916 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 127026 5032 VPYGVGKAA True PC9_epitope_Rep6 860.4756029156398 860.4745099358599 26.981 2 0.057532774003280225 0.004666047784238042 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 29264 18241 FVDGSAIQV True PC9_epitope_Rep3 934.47599683846 934.47544496793 75.375 1 0.05752075874415056 0.004666047784238042 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 92424 10173 RQSLGEPAL True PC9_epitope_Rep4 969.5243440132099 969.52324993586 46.806 2 0.05751655432847396 0.004666047784238042 0.9438714419765777 ['ENST00000556883.1_1_14:93650687-93651102:-|nuORF'] 132044 15393 VYIDQTMVL True NCI_RA007_Epitope_Rep4 1080.5525329069999 1080.5514299358601 66.883 2 0.05751161399489502 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 73741 7510 NHANGLTL True PC9_epitope_Rep2 838.4297153523801 838.42860993586 34.255 2 0.0575071184975567 0.004666047784238042 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 46653 7559 ITVGDIGPK True NCI_RA007_Epitope_Rep3 898.5123823471799 898.51128993586 36.857 2 0.05750409758581826 0.004666047784238042 0.9438714419765777 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'nc|ENSG00000161533|Q15067|ACOX1'] 106381 19360 SVSTQLSLV True PC9_epitope_Rep1 932.51786165044 932.51676993586 79.275 2 0.05749675605421438 0.004666047784238042 0.9438714419765777 ['ENSG00000214194|ENST00000397764|SMIM30'] 39839 8442 HQGGPAVAL True PC9_epitope_Rep3 848.4504507969599 848.44934993586 37.435 2 0.057493831750901135 0.004666047784238042 0.9438714419765777 ['ENSG00000231274|ENST00000612221|SBK3'] 132109 18505 VYINTAQEF True PC9_epitope_Rep1 1083.5236753068698 1083.52256993586 75.97 2 0.05748589958124419 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 35795 7499 GTWNGTTKV True PC9_epitope_Rep5 962.48214484806 962.48104993586 33.795 2 0.05748477137344419 0.004666047784238042 0.9438714419765777 ['ENSG00000176105|ENST00000314574|YES1'] 132934 19842 VYTVVDEM[Oxidation]F True PC9_epitope_Rep2 1117.50016336141 1117.49906993586 81.713 2 0.05747086505668549 0.004666047784238042 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 52598 11606 KPYTVVDVSA True PC9_epitope_Rep2 1077.57062549929 1077.5695299358601 49.968 2 0.057468584923241355 0.004666047784238042 0.9438714419765777 ['ENSG00000173517|ENST00000682557|PEAK1'] 1261 7681 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 34.497 1 0.057457285155642183 0.004666047784238042 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 35020 14999 GRAPQVLVL True PC9_epitope_Rep2 951.5865503469499 951.5860049679301 62.949 1 0.05745551078154879 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 35265 5543 GSLRPFVQK True NCI_RA007_Epitope_Rep4 1030.5923640033798 1030.59126993586 27.917 2 0.05745156760551924 0.004666047784238042 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 75908 5248 NRDRTQIAL True PC9_epitope_Rep6 1085.59415490853 1085.59304993586 27.972 2 0.05745005122737511 0.004666047784238042 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 54469 8171 LAAARLAAA True PC9_epitope_Rep1 826.5024863698198 826.50138993586 36.262 2 0.05743425629784247 0.004666047784238042 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 54075 11660 KYLYVDKNF True PC9_epitope_Rep2 1188.6179100448796 1188.6168099358601 50.182 2 0.05742781573684129 0.004666047784238042 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 60405 8400 LIIYSRNQ True NCI_RA007_Epitope_Rep4 1005.5607295219299 1005.55962993586 39.126 2 0.05742691998951324 0.004666047784238042 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.T725S|2|0.23|ENSG00000181544|chrX:14843974-14843974|T/A|missense_variant'] 128326 8710 VSDGNFSNY True H1975_Epitope_Rep2 1001.40903947745 1001.40794993586 38.463 2 0.05742438968906474 0.004666047784238042 0.9438714419765777 ['ENSG00000183508|ENST00000369448|TENT5C'] 54371 11398 KYQIINEEF True NCI_RA007_Epitope_Rep5 1182.5920892198599 1182.59098993586 50.493 2 0.05742208317697946 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 135270 18829 YAYPGVLLI True H1975_Epitope_Rep2 1007.5691689473099 1007.5685749679301 78.18 1 0.057421862300532193 0.004666047784238042 0.9438714419765777 ['ENSG00000100412|ENST00000216254|ACO2', 'ENST00000478010.1_1_22:41904038-41912046:+|nuORF'] 136314 10820 YGYHDFGSS True PC9_epitope_Rep3 1031.3984747937498 1031.39736993586 46.588 2 0.05739971205673635 0.004666047784238042 0.9438714419765777 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'ENST00000592763.5_1_19:10795072-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 102179 21879 SPSAAWLLGAA True PC9_epitope_Rep5 1042.5447451046198 1042.54364993586 89.195 2 0.057396291865421126 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 107246 11026 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59198993586 47.403 2 0.057394980822981334 0.004666047784238042 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 105415 17931 SVAESLNYV True PC9_epitope_Rep1 980.48147614172 980.48036993586 73.763 2 0.057394057910330656 0.004666047784238042 0.9438714419765777 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 1643 13799 AEGAPIIPISA True H1975_Epitope_Rep2 1037.57571087973 1037.57460993586 58.225 2 0.05738927615374457 0.004666047784238042 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 140747 16936 YYQNYFEKL True PC9_epitope_Rep6 1266.5920892198599 1266.59098993586 77.687 2 0.05738618725868672 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 131999 14095 VYGPLPQSF True NCI_RA007_Epitope_Rep4 1006.5123823471798 1006.51128993586 61.497 2 0.057384081548573385 0.004666047784238042 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 70877 7472 MEGPTPVSA True H1975_Epitope_Rep3 887.4058686733099 887.40531496793 33.72 1 0.05738244348572942 0.004666047784238042 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 94515 14591 RYIDRIHIF True PC9_epitope_Rep4 1231.68257599011 1231.68094490379 64.052 3 0.05737565994881705 0.004666047784238042 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 44506 11245 IPAAIATA True PC9_epitope_Rep4 726.4275900940601 726.4270449679301 51.028 1 0.05737540010457411 0.004666047784238042 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 39177 6109 HLGALLAR True H1975_Epitope_Rep2 849.51847078713 849.51736993586 28.476 2 0.057357587974680005 0.004666047784238042 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 8569 5676 AVADAVIEK True NCI_RA007_Epitope_Rep4 914.50729696674 914.50618993586 28.438 2 0.05734664967630099 0.004666047784238042 0.9438714419765777 ['ENST00000369426.9_1_1:119575536-119588262:-|nuORF', 'ENSG00000116874|ENST00000235521|WARS2'] 8269 4138 ATIQGAYAR True NCI_RA007_Epitope_Rep5 949.4981292653698 949.49702993586 22.415 2 0.057335296614373074 0.004666047784238042 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 4701 12430 ALDLEIATYR True NCI_RA007_Epitope_Rep2 1163.6186383208699 1163.61807496793 52.96 1 0.057309895215718686 0.004666047784238042 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 16703 22140 EEVQSLPLPL True PC9_epitope_Rep1 1123.6124903112698 1123.6113899358602 89.974 2 0.0572985856785604 0.004666047784238042 0.9438714419765777 ['ENSG00000145912|ENST00000274606|NHP2'] 110704 5895 TKASIKDVL True NCI_RA007_Epitope_Rep3 973.5807962601699 973.57968993586 30.164 2 0.05729551957416829 0.004666047784238042 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 38192 9783 HESLFGSVA True H1975_Epitope_Rep3 945.45559574705 945.45448993586 42.654 2 0.05727843029730289 0.004666047784238042 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16871803-16876886:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 114815 19749 TTDFIFNLY True H1975_Epitope_Rep2 1132.54407639828 1132.5429699358601 81.938 2 0.057276721219268675 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 44673 21301 IPLTLLPAA True PC9_epitope_Rep5 907.5742543277498 907.5737049679301 86.986 1 0.05727012249764987 0.004666047784238042 0.9438714419765777 ['ENSG00000116903|ENST00000366645|EXOC8'] 112904 11086 TPQEDYVEA True PC9_epitope_Rep5 1050.4505699362599 1050.4494699358602 47.63 2 0.05726131683774449 0.004666047784238042 0.9438714419765777 ['ENSG00000140829|ENST00000268482|DHX38'] 57139 6148 LEEQKIVQA True H1975_Epitope_Rep3 1056.5815245361598 1056.5804299358601 28.659 2 0.05725968153922153 0.004666047784238042 0.9438714419765777 ['ENSG00000167842|ENST00000611091|MIS12'] 61355 4292 LLEGEESR True PC9_epitope_Rep4 931.4610750503099 931.45996993586 22.919 2 0.057256638671801516 0.004666047784238042 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.E403K|1|0.16|ENSG00000170421|chr12:52898515-52898515|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000026025|ENST00000544301|VIM', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 122632 8725 VGTNEFTA True H1975_Epitope_Rep2 837.38684748089 837.3862949679301 38.522 1 0.05725331113924274 0.004666047784238042 0.9438714419765777 ['ENSG00000055163|ENST00000620254|CYFIP2', 'CYFIP2|p.A905Sfs*86|1|0.34|ENSG00000055163|chr5:157341122-157341122|G/TC|frameshift_variant', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'ENST00000524058.1_1_5:156810283-156816436:+|nuORF', 'ENST00000522884.5_1_5:156811334-156816436:+|nuORF'] 29456 9443 FVHPGAATV True PC9_epitope_Rep3 897.4708518883699 897.46974993586 41.262 2 0.05724487306007705 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 108261 16060 TEAPPIIFATP True H1975_Epitope_Rep1 1155.6175756917098 1155.61646993586 67.112 2 0.05724297117257677 0.004666047784238042 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 126594 6300 VPPPPPIAR True H1975_Epitope_Rep3 942.56508662638 942.56398993586 29.237 2 0.057239224582732014 0.004666047784238042 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 1401 14593 AEEFPNLAV True H1975_Epitope_Rep3 988.4865615221598 988.48601496793 61.5 1 0.05723228225334121 0.004666047784238042 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 103250 16397 SQSSVVYEI True PC9_epitope_Rep4 1010.4920408254198 1010.49094993586 71.032 2 0.05722909266229892 0.004666047784238042 0.9438714419765777 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 86378 16529 QQLGTAVEL True PC9_epitope_Rep4 957.5131106231698 957.51200993586 71.551 2 0.05722556072281203 0.004666047784238042 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 62896 23235 LMSLIINTF True PC9_epitope_Rep5 1050.57835373202 1050.5772499358602 94.357 2 0.05721749116735012 0.004666047784238042 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 83111 22099 PYNPLWAQL True PC9_epitope_Rep2 1100.5654805492 1100.5643899358602 90.475 2 0.057183967757826026 0.004666047784238042 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 30441 10873 GAGAPVYL True H1975_Epitope_Rep3 746.3962899657799 746.39574496793 46.905 1 0.057172259346874296 0.004689560842166968 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 24487 16784 FAIPLIEKL True H1975_Epitope_Rep1 1042.64266824074 1042.6415699358602 69.96 2 0.05715232975097094 0.004689560842166968 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 98032 8799 SHTHVSVVI True PC9_epitope_Rep5 977.52942939365 977.52832993586 38.788 2 0.05714037154175771 0.004689560842166968 0.9438714419765777 ['ENSG00000151461|ENST00000357604|UPF2'] 36575 21342 GVLENIFGV True PC9_epitope_Rep6 946.5123823471798 946.51128993586 94.963 2 0.057132249829776105 0.004689560842166968 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 73823 13419 NHDVQVIL True PC9_epitope_Rep1 936.50288029264 936.50178993586 56.477 2 0.057109930538991986 0.004689560842166968 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 20753 20571 EQLGTFTTL True PC9_epitope_Rep3 1008.51277627 1008.51166993586 84.392 2 0.05709164052130814 0.004689560842166968 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 115715 11070 TVLERVEGA True PC9_epitope_Rep5 972.5240096600398 972.52290993586 47.57 2 0.05708869712250144 0.004689560842166968 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 105450 8579 SVAQPIHL True H1975_Epitope_Rep3 863.48650195251 863.48540993586 37.99 2 0.05708585183109141 0.004689560842166968 0.9438714419765777 ['nc|ENSG00000161888|Q8NBT2-2|SPC24', 'ENST00000423327.2_1_19:11257861-11259987:-|nuORF', 'ENSG00000161888|ENST00000592540|SPC24'] 79083 15413 PFVDHVFTF True NCI_RA007_Epitope_Rep4 1107.53893144819 1107.5378299358601 66.957 2 0.057076607705107994 0.004711568976881576 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1'] 47470 10457 IYKAPSENW True PC9_epitope_Rep6 1106.53965972418 1106.53856993586 50.977 2 0.057075543116472276 0.004711568976881576 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 117076 21856 TYQVLAVTF True PC9_epitope_Rep2 1040.5542471591598 1040.5531499358601 89.544 2 0.05706112568297569 0.004711568976881576 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 1068 11547 AEALPSLAA True H1975_Epitope_Rep2 841.4545331178899 841.4539849679301 49.477 1 0.057057876103487434 0.004711568976881576 0.9438714419765777 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA'] 130289 20275 VTTDVSYLL True PC9_epitope_Rep4 1009.53317736141 1009.53208993586 86.13 2 0.057051014772143166 0.004711568976881576 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 21497 13701 ERQRWVTAL True PC9_epitope_Rep5 1157.63054041725 1157.62888490379 57.728 3 0.05704648172589565 0.004711568976881576 0.9438714419765777 ['ENSG00000110048|ENST00000263847|OSBP'] 32145 5563 GFAGDDAPR True PC9_epitope_Rep1 904.40389452736 904.40278993586 26.228 2 0.05704073405721523 0.004711568976881576 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 34559 19615 GQFGVGFYSA True PC9_epitope_Rep4 1031.4712458111896 1031.47014993586 83.566 2 0.05703449707702345 0.004711568976881576 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 43765 8861 IIYGGSVTG True H1975_Epitope_Rep3 865.45453311789 865.4539849679301 39.086 1 0.057030387381417816 0.004711568976881576 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 40902 4512 HVSIVEPK True NCI_RA007_Epitope_Rep2 907.51271670035 907.51160993586 22.183 2 0.0570164342139903 0.004711568976881576 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000433853.1_1_3:183867695-183868220:+|nuORF'] 87358 9936 QTDHLFFKY True H1975_Epitope_Rep1 1197.5818588893299 1197.58021490379 43.154 3 0.057012211155919514 0.004711568976881576 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 73827 13550 NHDVQVIL True PC9_epitope_Rep3 936.50288029264 936.50178993586 57.176 2 0.05700558683421283 0.004711568976881576 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 6133 8128 APNLQNQQV True PC9_epitope_Rep6 1010.5145076055 1010.51340993586 40.801 2 0.05700063173324034 0.004711568976881576 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 72138 10227 MRFGNEREL True PC9_epitope_Rep5 1150.5553268716599 1150.5536849037899 44.327 3 0.05698611188117011 0.004711568976881576 0.9438714419765777 ['ZNF639|p.I476L|1|0.71|ENSG00000121864|chr3:179334390-179334390|A/T|missense_variant', 'ENSG00000121864|ENST00000496856|ZNF639'] 104027 11875 SRSPGLVL True PC9_epitope_Rep5 827.48650195251 827.48540993586 50.675 2 0.05698491759755436 0.004711568976881576 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 61731 21713 LLIPGLATA True PC9_epitope_Rep3 867.54295419947 867.54184993586 88.813 2 0.056979751979285224 0.004711568976881576 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 34555 20318 GQFGVGFYSA True PC9_epitope_Rep2 1031.4712458111896 1031.4706749679299 83.578 1 0.05696836268492317 0.004711568976881576 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 75112 10588 NMVAKVDEV True PC9_epitope_Rep1 1003.5008316873099 1003.49972993586 45.619 2 0.056967305676928655 0.004711568976881576 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 137432 18709 YLMEVTHDL True PC9_epitope_Rep1 1119.52704643515 1119.5259499358601 76.753 2 0.05696443993172029 0.004711568976881576 0.9438714419765777 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'nc|ENSG00000133706|Q9P2J5-3|LARS1'] 94215 5267 RWPKKSAEF True NCI_RA007_Epitope_Rep4 1147.61382772395 1147.61218490379 26.807 3 0.05694841984672335 0.004711568976881576 0.9438714419765777 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 105181 10835 STNNWVLIK True NCI_RA007_Epitope_Rep5 1073.58694426977 1073.58584993586 48.312 2 0.056946700625775955 0.004711568976881576 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1'] 21562 16550 ERSDTFINL True PC9_epitope_Rep4 1093.54038800017 1093.53987496793 71.634 1 0.05693844651386049 0.0047347098159808655 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000474026.5_1_1:223946905-223957668:+|nuORF', 'CAPN2|p.R459M|1|0.2|ENSG00000162909|chr1:223759328-223759328|G/T|missense_variant'] 17335 7795 EHDPVGQM[Oxidation]V True PC9_epitope_Rep2 1026.4440454676198 1026.44294993586 35.355 2 0.05693623986252617 0.0047347098159808655 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 1085 5044 AEAPASPAP True H1975_Epitope_Rep2 809.3919328613299 809.3913849679301 24.483 1 0.05692658020197086 0.0047347098159808655 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 37914 6634 HEDVEALAA True H1975_Epitope_Rep2 953.4454249861699 953.44432993586 30.426 2 0.05692350183649551 0.0047347098159808655 0.9438714419765777 ['ENSG00000167657|ENST00000545797|DAPK3', 'ENST00000595279.1_1_19:3959101-3961233:-|nuORF'] 116635 21175 TYIGQGYII True PC9_epitope_Rep1 1026.53859709502 1026.53750993586 86.284 2 0.056918060117505574 0.0047347098159808655 0.9438714419765777 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000489591.5_1_17:39969413-39975983:+|nuORF'] 107715 16391 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.57388993586 71.009 2 0.05691235807011291 0.0047347098159808655 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 29635 21272 FVLPILQKL True PC9_epitope_Rep4 1069.68995278633 1069.6888499358602 89.992 2 0.05690876762098258 0.0047347098159808655 0.9438714419765777 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000599373.5_1_19:19030550-19032753:+|nuORF'] 139104 10299 YSNKEIFL True H1975_Epitope_Rep3 1012.5229470308799 1012.5223749679301 44.668 1 0.05689733937397869 0.0047347098159808655 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 24425 4413 FAGDDAPRA True NCI_RA007_Epitope_Rep3 918.4195445915 918.4184499358599 24.141 2 0.056897161312282556 0.0047347098159808655 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 83831 15009 QEFPSILA True H1975_Epitope_Rep2 903.4701831820298 903.46963496793 62.882 1 0.05687267780720416 0.0047347098159808655 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'ENST00000525306.1_1_11:103152943-103158366:+|nuORF'] 42082 15205 IEEIEGLISA True H1975_Epitope_Rep2 1072.56520576568 1072.5641099358602 63.642 2 0.05685117152280823 0.0047347098159808655 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 71848 17689 MPFGNVVSA True PC9_epitope_Rep6 920.4425885351999 920.44203496793 80.675 1 0.056808206187764734 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 33866 23482 GLVPFLVSV True PC9_epitope_Rep3 929.5586042636099 929.55805496793 95.602 1 0.056799167129333486 0.004752504204138334 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 47093 11655 IVVNLTGR True PC9_epitope_Rep5 870.5287011176599 870.52760993586 49.826 2 0.05679740329833361 0.004752504204138334 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 119716 4988 VETFGGLK True NCI_RA007_Epitope_Rep4 849.4596184983299 849.45852993586 25.663 2 0.056788304150087045 0.004752504204138334 0.9438714419765777 ['ENSG00000206384|ENST00000358511|COL6A6', 'nc|ENSG00000206384|A6NMZ7-2|COL6A6', 'COL6A6|p.T1544Hfs*49|1|0.17|ENSG00000206384|chr3:130599777-130599777|C/-|frameshift_variant'] 111336 23990 TLIEDILGV True PC9_epitope_Rep3 971.5539128059899 971.5533649679301 97.563 1 0.05678753785920106 0.004752504204138334 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 103271 10802 SQTFVNPHV True PC9_epitope_Rep5 1027.5086939490698 1027.50758993586 46.54 2 0.05678296975367144 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000602029.1_1_19:50519188-50519419:-|nuORF'] 9204 21429 AVPFSLDSV True PC9_epitope_Rep1 933.48074786573 933.4801949679301 87.265 1 0.05678016164170695 0.004752504204138334 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2'] 86366 10332 QQLGKVVQV True PC9_epitope_Rep3 997.5920296502098 997.59092993586 44.686 2 0.0567799206901535 0.004752504204138334 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 56850 6901 LEDGGSALA True H1975_Epitope_Rep3 831.3974121645899 831.39686496793 31.505 1 0.056777984867315265 0.004752504204138334 0.9438714419765777 ['ENSG00000223496|ENST00000435634|EXOSC6'] 108623 11129 TEIYGGLSA True H1975_Epitope_Rep2 909.4443623570098 909.44381496793 47.843 1 0.05674681456367484 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000116885|Q8WVF1-4|OSCP1', 'nc|ENSG00000116885|Q8WVF1-2|OSCP1', 'ENSG00000116885|ENST00000235532|OSCP1', 'nc|ENSG00000116885|Q8WVF1|OSCP1'] 47073 17939 IVVDNVPQV True PC9_epitope_Rep3 981.5494961318899 981.54838993586 74.204 2 0.05674330070087332 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 24449 20783 FAHPDLFVSI True PC9_epitope_Rep2 1144.59169529704 1144.5905899358602 85.385 2 0.05674240886035488 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000533825.1_1_1:52237763-52247292:+|nuORF'] 35551 14795 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.51670993586 62.172 2 0.05674232646840534 0.004752504204138334 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 83855 5790 QEGPPTPEA True H1975_Epitope_Rep2 924.4188758851599 924.4183249679301 27.266 1 0.0567398553576268 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000114859|P51788-4|CLCN2', 'nc|ENSG00000114859|P51788-3|CLCN2', 'ENSG00000114859|ENST00000265593|CLCN2', 'nc|ENSG00000114859|P51788-5|CLCN2'] 6825 11134 AQIDGTLST True PC9_epitope_Rep5 904.4501760134401 904.44906993586 47.812 2 0.056737404061431504 0.004752504204138334 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 96863 8369 SESRFFVSS True H1975_Epitope_Rep2 1044.48762415132 1044.48652993586 37.144 2 0.056733244198782375 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 87971 12074 QVRDVIIAA True PC9_epitope_Rep5 983.5763795860698 983.57528993586 51.437 2 0.0567177242608285 0.004752504204138334 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 5624 5348 APAEEPAAAAA True PC9_epitope_Rep6 967.4610750503098 967.45996993586 28.425 2 0.05671175807061714 0.004752504204138334 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 44948 9542 IQFNPPLSEK True NCI_RA007_Epitope_Rep3 1171.62372370131 1171.62262993586 44.621 2 0.056707325532428826 0.004752504204138334 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 1595 12309 AEFLPDPSA True H1975_Epitope_Rep3 945.4443623570099 945.44381496793 52.528 1 0.05669187799164543 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000158019|Q9NXR7-4|BABAM2', 'nc|ENSG00000158019|Q9NXR7-3|BABAM2', 'ENSG00000158019|ENST00000379624|BABAM2', 'nc|ENSG00000158019|Q9NXR7-1|BABAM2'] 43414 16887 IHSEPLGVVL True PC9_epitope_Rep4 1062.60734536118 1062.6062499358602 72.94 2 0.05668804761028597 0.004752504204138334 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 130746 10721 VVDPNDPQM True PC9_epitope_Rep5 1013.44879611445 1013.44768993586 46.228 2 0.056678082695550074 0.004752504204138334 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 40202 6932 HRGTGIAL True PC9_epitope_Rep1 823.46643521427 823.46532993586 31.47 2 0.056671841109374524 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 95661 10524 SAVPPGTSL True PC9_epitope_Rep6 827.43888305375 827.43778993586 51.269 2 0.056658437389259825 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 6053 15233 APLYQVAAA True PC9_epitope_Rep5 902.4861675993398 902.48561496793 63.603 1 0.05665825840038326 0.004752504204138334 0.9438714419765777 ['ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 31991 13100 GETIFVTAP True H1975_Epitope_Rep1 933.48074786573 933.4801949679301 55.479 1 0.056648669362644836 0.004752504204138334 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 1176 8025 AEDAGATEVKF True H1975_Epitope_Rep2 1136.5349682665599 1136.5338699358601 35.816 2 0.05664396582170043 0.004752504204138334 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant'] 101652 21061 SPFPLEAV True PC9_epitope_Rep1 858.44871946146 858.4481749679301 85.841 1 0.05662827466294473 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 93652 8410 RTFEKIEEV True PC9_epitope_Rep2 1149.60298825673 1149.60133490379 37.719 3 0.05661347821976048 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 116922 14757 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47107496793 61.762 1 0.056602977667204735 0.004752504204138334 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 126917 10165 VPVDTGVAA True PC9_epitope_Rep3 827.4388830537498 827.43833496793 44.053 1 0.056602501388860006 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 89391 13711 REMIPFAVV True NCI_RA007_Epitope_Rep3 1060.57393705792 1060.57282993586 61.254 2 0.05660180881934507 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'ENST00000586456.1_1_17:75486911-75493449:+|nuORF'] 26042 10986 FHDKYGNAVL True PC9_epitope_Rep5 1162.57710786206 1162.5754649037901 47.247 3 0.05660159550094289 0.004752504204138334 0.9438714419765777 ['ENST00000475465.1_1_X:77154999-77158279:+|nuORF', 'ENSG00000131174|ENST00000650309|COX7B', 'ENSG00000170516|ENST00000355591|COX7B2'] 119647 7882 VESGVPQPP True H1975_Epitope_Rep2 908.4603467743198 908.45924993586 35.264 2 0.05660122355467323 0.004752504204138334 0.9438714419765777 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 1129 7889 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 35.291 1 0.0565998229615311 0.004752504204138334 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 119070 6974 VEHGSVALP True H1975_Epitope_Rep3 907.4763311916299 907.4752299358599 31.787 2 0.05659128158302374 0.004752504204138334 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.I452V|1|0.26|ENSG00000137076|chr9:35720149-35720149|T/C|missense_variant'] 40680 6249 HTLNQIDSVK True PC9_epitope_Rep3 1153.6091362663299 1153.60802993586 29.074 2 0.056579814803985634 0.004752504204138334 0.9438714419765777 ['CON__P12763'] 72730 20006 MYSDVWKQL True PC9_epitope_Rep1 1168.5586809166 1168.55758993586 81.781 2 0.056576533959020854 0.004752504204138334 0.9438714419765777 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 116360 20046 TVYEGFISA True PC9_epitope_Rep5 985.4756624852898 985.47456993586 82.161 2 0.05657134181908349 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 61972 17029 LLLPGELAK True PC9_epitope_Rep1 952.5957180483199 952.59462993586 70.326 2 0.05656499159665633 0.004752504204138334 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 3471 12330 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep3 1042.5658747883201 1042.56537496793 52.611 1 0.05656191384387235 0.004752504204138334 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 11547 10183 DGNASGTTLLE True H1975_Epitope_Rep3 1076.49858275784 1076.49807496793 44.214 1 0.05656138889424641 0.004752504204138334 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5'] 35023 14249 GRAPQVLVL True PC9_epitope_Rep4 951.5865503469499 951.58544993586 62.713 2 0.05655757844647295 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 52495 8568 KPNEGAIVEV True PC9_epitope_Rep6 1054.56587447202 1054.56476993586 42.733 2 0.05655463860725697 0.004752504204138334 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4'] 26722 15685 FLDGNELTL True NCI_RA007_Epitope_Rep3 1020.51277627 1020.51166993586 69.331 2 0.056549773602036585 0.004752504204138334 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 99101 10473 SLAELEKR True PC9_epitope_Rep6 944.5290950404799 944.52798993586 51.043 2 0.05654404515771529 0.004752504204138334 0.9438714419765777 ['PARN|p.F419Lfs*7|1|0.37|ENSG00000140694|chr16:14580879-14580879|A/-|frameshift_variant', 'nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN', 'ENST00000562715.1_1_16:14670117-14678644:-|nuORF'] 25825 10654 FGEENIEVYHS True NCI_RA007_Epitope_Rep1 1322.5778957077 1322.57678993586 45.432 2 0.056535226297585645 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 7000 9919 AQQPTAVQV True PC9_epitope_Rep1 940.4977949121998 940.49668993586 43.013 2 0.05652427071347908 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 36472 17040 GVISKTFQL True PC9_epitope_Rep2 991.57023157647 991.56912993586 70.796 2 0.05652230869764041 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 108330 3297 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 17.324 2 0.056517553421666394 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 56864 6089 LEDKPPAPP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 28.434 2 0.05650508222185882 0.004752504204138334 0.9438714419765777 ['ENSG00000180370|ENST00000327134|PAK2', 'ENST00000556425.2_1_15:21937379-21938108:-|nuORF'] 14283 6050 DSYVGDEAQTK True NCI_RA007_Epitope_Rep2 1211.5306111621096 1211.52950993586 28.138 2 0.05650191908047184 0.004752504204138334 0.9438714419765777 ['ENST00000415794.1_1_3:139212742-139212994:+|nuORF'] 36529 14487 GVKQLIVGV True PC9_epitope_Rep4 911.5804023373498 911.57930993586 63.635 2 0.05647843652388805 0.004752504204138334 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000401075.3_1_1:31961199-31961370:-|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 87542 18048 QTIQDIVTV True PC9_epitope_Rep6 1015.5549754351499 1015.55386993586 82.053 2 0.056476890203880616 0.004752504204138334 0.9438714419765777 ['ENSG00000266028|ENST00000573034|SRGAP2', 'nc|ENSG00000196369|P0DMP2|SRGAP2B', 'ENSG00000196369|ENST00000641863|SRGAP2B', 'ENSG00000171943|ENST00000367123|SRGAP2C', 'ENST00000483628.1_1:206566231-206579954:+|nuORF'] 19565 12384 ELRARQLEL True PC9_epitope_Rep4 1126.64585612822 1126.64422490379 55.44 3 0.05647608098645214 0.004752504204138334 0.9438714419765777 ['ENST00000557266.5_1_15:91500194-91504996:+|nuORF', 'ENSG00000166965|ENST00000394258|RCCD1', 'ENST00000555737.5_1_15:91500194-91503934:+|nuORF'] 135164 16067 YASDVQLIL True H1975_Epitope_Rep2 1020.54916177872 1020.54806993586 67.004 2 0.05647373011612717 0.004752504204138334 0.9438714419765777 ['nc|ENSG00000123094|Q8NHQ8-2|RASSF8', 'ENSG00000123094|ENST00000689635|RASSF8'] 97912 13811 SHMEPQVCL True PC9_epitope_Rep5 1042.45758697634 1042.4564899358602 58.143 2 0.056472745227671955 0.004752504204138334 0.9438714419765777 ['ENST00000465315.1_1_2:131099412-131099547:-|nuORF', 'ENSG00000136710|ENST00000259229|CCDC115', 'nc|ENSG00000136710|Q96NT0-2|CCDC115'] 74134 12820 NHYGGVVSL True PC9_epitope_Rep1 944.4715801643599 944.47048993586 54.186 2 0.05646546869933969 0.004774432427165546 0.9438714419765777 ['SPACA9|p.A130G|1|0.27|ENSG00000165698|chr9:132888331-132888331|C/G|missense_variant', 'nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 97868 18485 SHLDYDITL True PC9_epitope_Rep2 1075.5185899264302 1075.51807496793 76.436 1 0.05646139251600135 0.004774432427165546 0.9438714419765777 ['ENSG00000163960|ENST00000296328|UBXN7'] 91526 14750 RPADVIFAT True PC9_epitope_Rep1 988.5341804209199 988.53308993586 61.555 2 0.05645743542905117 0.004774432427165546 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 21663 10884 ERTSFNYAM True PC9_epitope_Rep6 1117.4862442523297 1117.4851499358601 52.728 2 0.056443860109850315 0.004774432427165546 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 127630 14578 VRDPRVLIL True PC9_epitope_Rep2 1079.68151336095 1079.68040993586 61.344 2 0.056441802536194796 0.004774432427165546 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 99041 6052 SKTSAQVVL True NCI_RA007_Epitope_Rep4 931.5338460677499 931.53274993586 29.896 2 0.056435773568489216 0.004774432427165546 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'ENST00000528593.1_1_11:46804822-46806223:-|nuORF'] 8253 17979 ATINEVVQV True PC9_epitope_Rep3 971.52876068731 971.52766993586 74.36 2 0.0564345112871963 0.004774432427165546 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217', 'ZNF217|p.S275Ifs*4|1|0.32|ENSG00000171940|chr20:53582004-53582005|-/T|frameshift_variant'] 108977 7753 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46963496793 34.806 1 0.05642848431720067 0.004774432427165546 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 9999 8735 AYSVEHNQL True PC9_epitope_Rep1 1059.49852318819 1059.49742993586 38.437 2 0.05642746259092954 0.004774432427165546 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 103824 15495 SRHPFLTAL True PC9_epitope_Rep5 1040.5767139392399 1040.57560993586 64.61 2 0.056424766848125946 0.004774432427165546 0.9438714419765777 ['nc|ENSG00000142208|P31749-2|AKT1', 'ENSG00000142208|ENST00000649815|AKT1'] 23757 12401 EYIQKNVQL True PC9_epitope_Rep3 1133.6080736371698 1133.6069699358602 52.729 2 0.05641892347248987 0.004774432427165546 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 42579 7399 IESRTLAIA True H1975_Epitope_Rep2 972.5603951687599 972.55928993586 33.402 2 0.056416449728051134 0.004774432427165546 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 47361 10907 IYIAGHPAF True NCI_RA007_Epitope_Rep1 987.51780208079 987.51670993586 46.417 2 0.056408135106857146 0.004774432427165546 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 17821 8612 EIAEAYLGK True NCI_RA007_Epitope_Rep1 992.5178616504398 992.51676993586 37.499 2 0.05640530790233566 0.004774432427165546 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 140800 12779 YYSNLHQTF True PC9_epitope_Rep5 1171.52982331647 1171.5287299358602 54.163 2 0.056382556142672326 0.004774432427165546 0.9438714419765777 ['ENSG00000171806|ENST00000310392|METTL18'] 109519 15430 THADYVLEM True PC9_epitope_Rep2 1077.48009624273 1077.47898993586 64.629 2 0.056379418247843344 0.004774432427165546 0.9438714419765777 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF', 'ENSG00000172009|ENST00000307741|THOP1'] 97833 13774 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.49088993586 58.001 2 0.05636798883146483 0.004774432427165546 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 76663 13502 NTISTGLLY True H1975_Epitope_Rep3 980.51786165044 980.51731496793 57.212 1 0.056361206248214536 0.004774432427165546 0.9438714419765777 ['ENSG00000139218|ENST00000369367|SCAF11', 'ENST00000474828.1_1_12:46355467-46384201:-|nuORF', 'ENST00000547018.5_1_12:46345524-46385838:-|nuORF'] 140331 10139 YYEEQHPEL True PC9_epitope_Rep4 1206.5193182024198 1206.51822993586 46.678 2 0.05634845337230842 0.004774432427165546 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 85083 19963 QIPVKWIGV True PC9_epitope_Rep5 1038.6226015024997 1038.62150993586 81.842 2 0.056336286050328976 0.004774432427165546 0.9438714419765777 ['ENSG00000035687|ENST00000366535|ADSS2'] 27583 13214 FPRPVTVEP True PC9_epitope_Rep2 1040.5654805492 1040.5643899358602 56.105 2 0.05633448988476013 0.004774432427165546 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 34870 11070 GQVIKGIGV True PC9_epitope_Rep4 869.5334521449298 869.53234993586 50.358 2 0.056327271361865605 0.004798557996784723 0.9438714419765777 ['ENSG00000171497|ENST00000307720|PPID'] 39179 5527 HLGALLAR True NCI_RA007_Epitope_Rep3 849.51847078713 849.51736993586 28.738 2 0.05632302502323006 0.004798557996784723 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 46770 14107 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.45752993586 59.273 2 0.05629619827585295 0.0048072254054579 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 107539 11038 TADHNLLLY True H1975_Epitope_Rep3 1058.53965972418 1058.53907496793 47.547 1 0.05629423103100512 0.0048072254054579 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 139522 20240 YTLDGGDIINA True PC9_epitope_Rep1 1150.5506183307 1150.5495299358602 82.68 2 0.05628714327261211 0.0048072254054579 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 54482 8371 LAAARLAAA True PC9_epitope_Rep5 826.5024863698198 826.50138993586 37.141 2 0.05626208356860123 0.0048072254054579 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 113728 9626 TRDEVTGEAAL True PC9_epitope_Rep1 1160.567331024 1160.56622993586 41.881 2 0.05625703378147813 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000169696|Q9BZE9-3|ASPSCR1', 'ENSG00000169696|ENST00000306739|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-2|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-4|ASPSCR1'] 88993 3573 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 18.723 2 0.05625495569769721 0.0048072254054579 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 126541 17892 VPPAVTGITFL True H1975_Epitope_Rep3 1113.64339651673 1113.6422899358602 74.919 2 0.056252084342768474 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 131080 13301 VVLVLAGR True PC9_epitope_Rep5 825.5436229058099 825.54252993586 56.173 2 0.05624861994374326 0.0048072254054579 0.9438714419765777 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 2865 7403 AEYINEAAA True NCI_RA007_Epitope_Rep3 950.4345259492999 950.43342993586 36.246 2 0.05622566655238438 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 88893 6409 REAPPVVPP True H1975_Epitope_Rep3 960.5392658013599 960.53816993586 29.629 2 0.05620344367682236 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 11962 16613 DHTLGNII True PC9_epitope_Rep1 881.46068112749 881.45958993586 68.728 2 0.056192040071267914 0.0048072254054579 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 48501 8074 KEFIKIVEA True NCI_RA007_Epitope_Rep5 1075.62774645259 1075.62664993586 37.745 2 0.05619034861259052 0.0048072254054579 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 40401 9355 HRVEEEHVIL True PC9_epitope_Rep5 1259.6622344683499 1259.66059490379 40.939 3 0.05618577520584994 0.0048072254054579 0.9438714419765777 ['ENSG00000136381|ENST00000258886|IREB2'] 71060 5310 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 25.476 1 0.0561744148950365 0.0048072254054579 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 8004 6345 ATDPTIHTV True PC9_epitope_Rep4 953.4818104948899 953.48070993586 31.483 2 0.05617315402940388 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 109556 4536 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 24.698 2 0.056160997174401775 0.0048072254054579 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 140614 14354 YYNGKWEFL True NCI_RA007_Epitope_Rep5 1218.5709598524597 1218.5698699358602 61.897 2 0.05615592182132315 0.0048072254054579 0.9438714419765777 ['ENSG00000144843|ENST00000357003|ADPRH'] 4055 6799 AHQQSIPAV True PC9_epitope_Rep2 949.4981292653698 949.49702993586 31.558 2 0.056126498629862596 0.0048072254054579 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 118623 3732 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 19.352 2 0.056121674469930084 0.0048072254054579 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 73768 15901 NHASLISAL True PC9_epitope_Rep5 924.50288029264 924.5023349679301 66.153 1 0.05611256305971856 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 12383 10663 DKDEIPTISSY True H1975_Epitope_Rep1 1266.59796244594 1266.59686993586 45.973 2 0.05611135189718318 0.0048072254054579 0.9438714419765777 ['ENSG00000227729|ENST00000557640|RD3L'] 2848 10199 AEVVDEIAA True H1975_Epitope_Rep2 915.4549270407098 915.4543749679301 44.235 1 0.05610329673174217 0.0048072254054579 0.9438714419765777 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 71074 5805 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 27.352 1 0.05609979138829469 0.0048072254054579 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 70879 8036 MEGPVRIAA True H1975_Epitope_Rep2 942.4956867372199 942.49458993586 35.86 2 0.05609888011644006 0.0048072254054579 0.9438714419765777 ['ENST00000527967.5_1_11:125932492-125932705:-|nuORF'] 98826 13892 SITSELHAV True PC9_epitope_Rep5 955.4974605590301 955.49636993586 58.455 2 0.05607714483818438 0.0048072254054579 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 96832 9785 SESLIKQIP True H1975_Epitope_Rep2 1013.57571087973 1013.5746099358599 42.625 2 0.056044103586495204 0.0048072254054579 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 43449 11686 IHSSIVSTL True PC9_epitope_Rep4 955.5338460677501 955.53274993586 52.714 2 0.05603477490180737 0.0048072254054579 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 57944 11864 LEQNIQLPAA True H1975_Epitope_Rep2 1095.59242357303 1095.5913299358601 50.713 2 0.056025955873611026 0.0048072254054579 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 88971 3355 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 17.622 2 0.05602096009540435 0.0048072254054579 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 126382 19888 VPLEFPVVA True PC9_epitope_Rep6 969.5535188831699 969.55242993586 89.154 2 0.05602082490608789 0.0048072254054579 0.9438714419765777 ['ENST00000268489.9_1_16:72994068-73081865:-|nuORF'] 136704 17928 YIHVHFLEV True PC9_epitope_Rep4 1155.60767971435 1155.60604490379 77.008 3 0.05600953160079966 0.0048072254054579 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 25392 20370 FEILPGLSV True H1975_Epitope_Rep2 973.54843350273 973.54788496793 84.411 1 0.05598888761932538 0.0048072254054579 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 2221 7856 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.43850993586 35.168 2 0.05598561412022887 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 51854 9463 KKLPPLPSL True NCI_RA007_Epitope_Rep4 991.64300259391 991.64190993586 43.256 2 0.05598156726270381 0.0048072254054579 0.9438714419765777 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 95278 21629 SADTTILFV True PC9_epitope_Rep2 965.50696261357 965.50641496793 88.671 1 0.05597912409846252 0.0048072254054579 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 7244 17241 ARIPLNPVL True PC9_epitope_Rep2 991.61785047523 991.61674993586 71.579 2 0.055971539467404484 0.0048072254054579 0.9438714419765777 ['ENSG00000185338|ENST00000332029|SOCS1'] 68647 18964 LVAPPLPAA True PC9_epitope_Rep5 847.51673945163 847.51564993586 77.969 2 0.05594985005152133 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 1206 6523 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.40686993586 30.004 2 0.055933155500122164 0.0048072254054579 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 37326 19543 GVVTDLITV True PC9_epitope_Rep6 915.52769805815 915.52660993586 87.835 2 0.05593104860506276 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3'] 36556 14851 GVLDAILATK True NCI_RA007_Epitope_Rep4 999.59644632431 999.59534993586 64.587 2 0.055920447503950955 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 120267 16257 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 67.775 2 0.05591816001489664 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 31939 9317 GESAEAFVA True H1975_Epitope_Rep2 879.3974121645899 879.39686496793 40.798 1 0.05590778271192878 0.0048072254054579 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000581012.6_1_17:30190380-30195078:-|nuORF'] 96682 7145 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.4183249679301 32.455 1 0.05589866628767268 0.0048072254054579 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 68173 2874 LTQDQDVDVK True NCI_RA007_Epitope_Rep1 1159.57208205127 1159.57098993586 15.003 2 0.05589300469809357 0.0048072254054579 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 40737 10734 HTVEDLVKV True PC9_epitope_Rep6 1038.5709598524597 1038.5698699358602 52.108 2 0.05589054969365321 0.0048072254054579 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE'] 103828 12975 SRIARALAL True PC9_epitope_Rep1 969.6083484206899 969.60724993586 54.78 2 0.05585579614457364 0.0048072254054579 0.9438714419765777 ['ENSG00000142871|ENST00000451137|CCN1'] 75317 18073 NPVDILTYV True H1975_Epitope_Rep3 1032.54916177872 1032.5485749679299 75.713 1 0.05585426269558551 0.0048072254054579 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 101855 7680 SPKQILDPA True PC9_epitope_Rep4 967.5338460677499 967.53274993586 36.92 2 0.0558523608617751 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant'] 138072 6485 YQDTPKQI True PC9_epitope_Rep3 991.4974605590298 991.49636993586 29.97 2 0.055847657689878503 0.0048072254054579 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 107261 13367 SYPSAFSKL True PC9_epitope_Rep6 998.50729696674 998.50618993586 63.079 2 0.055846371971497 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1', 'MARF1|p.A871Lfs*9|2|0.2|ENSG00000166783|chr16:15621761-15621761|C/-|frameshift_variant'] 32123 5991 GEYRGSDFTA True NCI_RA007_Epitope_Rep4 1101.47270236317 1101.4716099358602 29.662 2 0.055842479213833646 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 135634 7299 YEERVQAVV True H1975_Epitope_Rep2 1091.56112344475 1091.56002993586 33.013 2 0.05583200845929594 0.0048072254054579 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 9028 17986 AVIGDVIRV True PC9_epitope_Rep2 940.57056592964 940.56946993586 74.485 2 0.05581830318890749 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 30435 10572 GAGAPVYL True H1975_Epitope_Rep1 746.3962899657799 746.39574496793 45.618 1 0.05580981481490844 0.0048072254054579 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 131697 18827 VWSDVTPLTF True NCI_RA007_Epitope_Rep1 1163.58627556343 1163.5857749679299 77.377 1 0.05580397269738515 0.0048072254054579 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 27178 9517 FLSKLQDD True PC9_epitope_Rep1 964.48656152216 964.48546993586 41.462 2 0.055799234272687265 0.0048072254054579 0.9438714419765777 ['ENSG00000135392|ENST00000678005|DNAJC14'] 11774 14006 DHIHIIAL True PC9_epitope_Rep6 930.52870111766 930.52760993586 65.729 2 0.05579920914304012 0.0048072254054579 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 89657 9828 REVDPLRIPP True H1975_Epitope_Rep2 1190.6771562565 1190.6760499358602 42.789 2 0.05579515480565634 0.0048072254054579 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 96141 11394 SEDYPAALP True H1975_Epitope_Rep3 961.4392769765699 961.43816993586 48.94 2 0.05579360187541845 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 120261 17237 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 71.119 2 0.055792112643830605 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 124317 13716 VLDPNTVFA True H1975_Epitope_Rep1 974.50729696674 974.5067449679301 57.897 1 0.055791424093444134 0.0048072254054579 0.9438714419765777 ['CON__P34955'] 131077 12722 VVLVLAGR True PC9_epitope_Rep2 825.5436229058099 825.54252993586 54.241 2 0.05578950228247683 0.0048072254054579 0.9438714419765777 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 90008 13571 RGDLPFVVPR True PC9_epitope_Rep4 1154.6560268890998 1154.65492993586 60.095 2 0.05577867075890321 0.0048072254054579 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 90699 4547 RKMAQAVTL True NCI_RA007_Epitope_Rep3 1016.5800850675199 1016.57898993586 24.755 2 0.05577392928836928 0.0048072254054579 0.9438714419765777 ['ENSG00000157978|ENST00000374338|LDLRAP1', 'LDLRAP1|p.S202Pfs*2|1|0.48|ENSG00000157978|chr1:25563141-25563141|T/-|frameshift_variant', 'ENST00000488127.1_1_1:25880414-25890333:+|nuORF'] 40199 12017 HRGIELTL True PC9_epitope_Rep2 937.53451477409 937.53340993586 51.54 2 0.05574732870369746 0.0048072254054579 0.9438714419765777 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-3|SHMT1', 'nc|ENSG00000176974|P34896-2|SHMT1', 'nc|ENSG00000176974|P34896-4|SHMT1'] 105920 7576 SVLDSSALK True NCI_RA007_Epitope_Rep4 918.5022115863 918.50110993586 35.79 2 0.05574257526893998 0.0048072254054579 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25573299-25581087:+|nuORF', 'nc|ENSG00000197077|Q9BY89-2|KIAA1671'] 84940 18647 QHVQEWWEL True PC9_epitope_Rep6 1253.5829215184897 1253.58182993586 84.369 2 0.055722856403549924 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3', 'ENST00000569959.5_1_16:30214216-30214357:+|nuORF', 'ENST00000562257.5_1_16:30212387-30214357:+|nuORF', 'nc|ENSG00000289755|P50225-2|SULT1A1', 'ENSG00000261052|ENST00000338971|SULT1A3', 'ENSG00000213648|ENST00000360423|SULT1A4', 'ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'STK3-SULT1A3|2|fusion', 'STK3-SULT1A3|1|fusion'] 38696 11628 HHSGNTYFL True PC9_epitope_Rep3 1074.48829285766 1074.4871899358602 49.744 2 0.055705455201017384 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 47188 12643 IYAGGIKSI True PC9_epitope_Rep5 920.53311779176 920.53202993586 53.635 2 0.05569794102529248 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4', 'ENST00000573023.6_1_16:67984709-67996179:-|nuORF'] 43230 9193 IGYNPDTV True H1975_Epitope_Rep3 877.41814760917 877.4175949679301 40.353 1 0.05568100911942316 0.0048072254054579 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000443590.1_1_2:107314489-107314633:-|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 88226 21153 QYDPTPLTW True PC9_epitope_Rep5 1119.52367530687 1119.52256993586 86.418 2 0.05567610338622007 0.0048072254054579 0.9438714419765777 ['ADAMTS12|p.Y616Tfs*25|1|0.23|ENSG00000151388|chr5:33637620-33637620|G/-|frameshift_variant', 'ADAMTS12|p.D612Tfs*29|1|0.19|ENSG00000151388|chr5:33637631-33637631|C/-|frameshift_variant', 'ADAMTS12|p.K880Rfs*51|1|0.33|ENSG00000151388|chr5:33595949-33595949|T/-|frameshift_variant', 'nc|ENSG00000151388|P58397-3|ADAMTS12', 'ADAMTS12|p.R1460Dfs*93|1|0.33|ENSG00000151388|chr5:33546127-33546127|T/-|frameshift_variant', 'ADAMTS12|p.E1422Sfs*131|1|0.18|ENSG00000151388|chr5:33549245-33549245|C/-|frameshift_variant', 'ENSG00000151388|ENST00000504830|ADAMTS12'] 21420 10317 ERNNTRLLL True PC9_epitope_Rep1 1127.64110510095 1127.63944490379 44.568 3 0.05564929087902222 0.0048072254054579 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA1-ALDH3B1|1|fusion', 'PPFIA2|p.N382Tfs*10|1|0.1|ENSG00000139220|chr12:81374755-81374755|T/-|frameshift_variant', 'PPFIA2|p.A489Lfs*3|1|0.65|ENSG00000139220|chr12:81368742-81368742|C/-|frameshift_variant', 'ENST00000602716.5_1_19:49631560-49640169:+|nuORF', 'ENST00000421230.6_1_19:49631605-49643027:+|nuORF', 'nc|ENSG00000143847|O75335|PPFIA4', 'ENSG00000177380|ENST00000334186|PPFIA3', 'nc|ENSG00000177380|O75145-2|PPFIA3', 'nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'ENSG00000143847|ENST00000295706|PPFIA4'] 129667 15180 VTIEDVQKL True PC9_epitope_Rep4 1043.58627556343 1043.5851699358602 66.314 2 0.05564432003788979 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000439132.1_1_1:79520632-79520758:-|nuORF'] 15837 4751 EDKYEEEIK True NCI_RA007_Epitope_Rep2 1181.5451985970901 1181.5441099358602 23.11 2 0.05564127738507667 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000520239.1_1_8:70042334-70042577:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF'] 5173 23216 ALPEIFTEL True PC9_epitope_Rep1 1031.55391280599 1031.55280993586 94.099 2 0.05563444346166269 0.0048072254054579 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 67033 18321 LTAPALALA True PC9_epitope_Rep6 839.5116540711899 839.51054993586 83.114 2 0.055625512448713554 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 67586 15438 LTETEDWLY True H1975_Epitope_Rep3 1168.5288202569598 1168.52827496793 64.796 1 0.055622281863596267 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 70203 21410 LYLPSFFTY True NCI_RA007_Epitope_Rep2 1149.57464825057 1149.5740749679298 88.6 1 0.055615764797247794 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 86676 17743 QRIDEFEAL True PC9_epitope_Rep1 1119.5560380643099 1119.55547496793 73.046 1 0.05560936350168727 0.0048072254054579 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 119984 17419 VFAGVFNTF True NCI_RA007_Epitope_Rep3 1000.50181766348 1000.50127496793 76.427 1 0.055599366133768216 0.0048072254054579 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 1269 7946 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 35.534 1 0.0555917039380893 0.0048072254054579 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 96914 6616 SETKIFTA True NCI_RA007_Epitope_Rep5 895.4650978015899 895.46400993586 32.109 2 0.055591581420477744 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 35000 10940 GRAPGGLSL True PC9_epitope_Rep1 826.4661008611 826.4650099358599 46.969 2 0.05558982136873011 0.0048072254054579 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 7934 20051 ATDFGEALV True PC9_epitope_Rep1 921.4443623570098 921.44326993586 81.952 2 0.05558621095565828 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 115577 6617 TVIAKVNNV True PC9_epitope_Rep6 956.5654805492 956.56438993586 34.166 2 0.055575745452062675 0.0048072254054579 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 14240 4277 DSYVGDEAQSK True H1975_Epitope_Rep1 1197.51496109797 1197.5138699358602 21.424 2 0.0555611055943758 0.0048072254054579 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 129481 11133 VTESPAKFALY True H1975_Epitope_Rep3 1224.63903941228 1224.6379499358602 47.919 2 0.05556019669316869 0.0048072254054579 0.9438714419765777 ['ENSG00000153179|ENST00000542104|RASSF3'] 82635 5608 PVLKNPDDPDT True NCI_RA007_Epitope_Rep5 1209.5877321154098 1209.5866299358602 28.259 2 0.055550748425152535 0.0048072254054579 0.9438714419765777 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 119662 8286 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43872496793 36.824 1 0.05554974627210418 0.0048072254054579 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 131643 20862 VWFPDMMPTW True NCI_RA007_Epitope_Rep3 1308.5671374253197 1308.5660299358601 90.837 2 0.055543293081113075 0.0048072254054579 0.9438714419765777 ['ENSG00000005812|ENST00000355619|FBXL3'] 129328 10828 VTDSPSPEYL True H1975_Epitope_Rep2 1106.5131701928199 1106.5120699358602 46.68 2 0.05554020882372172 0.0048072254054579 0.9438714419765777 ['ENSG00000170485|ENST00000335681|NPAS2', 'ENST00000486017.5_1_2:101541677-101580523:+|nuORF'] 15202 13097 EAFNMIDQNR True PC9_epitope_Rep1 1236.5557207944798 1236.55462993586 55.247 2 0.05553325680761401 0.0048072254054579 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 35802 21034 GTYDIFYTA True PC9_epitope_Rep2 1049.47057710485 1049.46948993586 86.36 2 0.05553222532947909 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 105174 5598 STMVDVRVMKK True NCI_RA007_Epitope_Rep4 1292.6944631967597 1292.6928149037901 28.132 3 0.05551495731952599 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 89540 3636 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5876299358601 20.062 2 0.05551259971108858 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 110143 21898 TIDDGIFEV True PC9_epitope_Rep1 1007.48114178855 1007.48004993586 89.044 2 0.0554737925071135 0.0048072254054579 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 139950 19196 YVIEDDVNM True PC9_epitope_Rep3 1096.47467650912 1096.47417496793 79.055 1 0.05546618680732624 0.0048072254054579 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 117432 15103 VADPYVVIM True NCI_RA007_Epitope_Rep3 1005.5205045027299 1005.51997496793 66.898 1 0.055443752490963095 0.0048072254054579 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 38080 3391 HENGVHTIDVK True NCI_RA007_Epitope_Rep2 1247.62584895963 1247.62420490379 17.849 3 0.05543955976495479 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000475487.1_1_3:58141790-58149086:+|nuORF'] 2589 10554 AESEITIAP True H1975_Epitope_Rep3 929.4705771048499 929.46948993586 45.663 2 0.05543587626345693 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 139252 9761 YTDAALNY True H1975_Epitope_Rep3 929.41306222873 929.41196993586 42.568 2 0.055417231203863604 0.0048072254054579 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000497425.1_1_2:166736340-166740450:-|nuORF'] 40214 6444 HRGTGLVL True PC9_epitope_Rep2 851.49773534255 851.49662993586 30.201 2 0.055413119264335474 0.0048072254054579 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 118777 6545 VEDYSQNVA True H1975_Epitope_Rep3 1023.4509042894298 1023.4498099358599 30.143 2 0.05541036978317425 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6'] 19153 10883 ELISNSSDAL True H1975_Epitope_Rep3 1047.50841916555 1047.50732993586 46.944 2 0.055388522392151675 0.0048072254054579 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P'] 71065 5187 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 25.024 2 0.055387432318032205 0.0048072254054579 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 2678 11381 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 48.826 1 0.05538036617053511 0.0048072254054579 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 105921 7412 SVLDSSALK True NCI_RA007_Epitope_Rep5 918.5022115863 918.50110993586 35.188 2 0.055377687430419355 0.0048072254054579 0.9438714419765777 ['ENSG00000197077|ENST00000358431|KIAA1671', 'ENST00000494730.2_1_22:25573299-25581087:+|nuORF', 'nc|ENSG00000197077|Q9BY89-2|KIAA1671'] 122824 8445 VGVNGFGR True PC9_epitope_Rep3 804.4242360491198 804.42312993586 37.446 2 0.05537044629277943 0.0048072254054579 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 83901 6611 QEIRLTEQA True H1975_Epitope_Rep2 1086.56693710118 1086.5658499358601 30.337 2 0.05536738820448875 0.0048072254054579 0.9438714419765777 ['ENSG00000103381|ENST00000381774|CPPED1', 'ENST00000539677.1_1_16:12874994-12897657:-|nuORF', 'nc|ENSG00000103381|Q9BRF8-3|CPPED1', 'nc|ENSG00000103381|Q9BRF8-2|CPPED1'] 74333 17273 NIPGITLL True H1975_Epitope_Rep1 839.51165407119 839.51110496793 71.903 1 0.055362541359447064 0.0048072254054579 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF'] 86983 17421 QRVWAEYAL True PC9_epitope_Rep4 1134.5821932425 1134.58108993586 75.003 2 0.05535900145960317 0.0048072254054579 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 96836 9740 SESLIKQIP True H1975_Epitope_Rep3 1013.57571087973 1013.5746099358599 42.487 2 0.055358219430750776 0.0048072254054579 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 39754 16609 HPYLFPVAA True PC9_epitope_Rep6 1013.5334521449298 1013.53234993586 76.343 2 0.05535224065889724 0.0048072254054579 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 70219 23807 LYLPSFFTY True PC9_epitope_Rep5 1149.57464825057 1149.5740749679298 96.555 1 0.05534880216150709 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 99942 16315 SLIGHLQTL True PC9_epitope_Rep6 980.5654805492001 980.56438993586 75.121 2 0.05534313730389943 0.0048072254054579 0.9438714419765777 ['ENSG00000138166|ENST00000369583|DUSP5'] 34479 9089 GQDGQLKGF True PC9_epitope_Rep1 948.4664947839199 948.46538993586 39.813 2 0.05531635492790258 0.0048072254054579 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 31367 5245 GEAPPSAPP True H1975_Epitope_Rep1 821.3919328613299 821.39082993586 25.238 2 0.055314352527220195 0.0048072254054579 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF'] 54525 16936 LAAGLLEEL True NCI_RA007_Epitope_Rep4 927.52769805815 927.5271449679301 73.392 1 0.05531077051056593 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1', 'ENST00000469476.2_1_1:40313418-40313755:-|nuORF'] 54310 21588 KYPSPFFVF True PC9_epitope_Rep2 1130.5800679841798 1130.5794749679299 88.51 1 0.055310615376961594 0.0048072254054579 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 8201 12678 ATGSWDSFLK True NCI_RA007_Epitope_Rep4 1110.53457434374 1110.53346993586 55.806 2 0.055302808063577055 0.0048072254054579 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 54479 7024 LAAARLAAA True PC9_epitope_Rep4 826.5024863698198 826.50138993586 34.269 2 0.05530027967445714 0.0048072254054579 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 102813 15015 SQFPGAITL True NCI_RA007_Epitope_Rep4 932.4967322830399 932.49562993586 65.265 2 0.055299338121262746 0.0048072254054579 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 972 4483 AEAAPPTQEA True H1975_Epitope_Rep2 983.45598966987 983.45488993586 22.357 2 0.05529347594863677 0.0048072254054579 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 57916 11042 LEQLFQDEVAK True NCI_RA007_Epitope_Rep1 1318.67688147298 1318.6757899358602 46.947 2 0.05528331885396331 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 48577 9761 KEIDGSEIVKF True H1975_Epitope_Rep2 1263.6710678165498 1263.66943490379 42.535 3 0.055265847266656884 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'DOCK4|p.K1934Qfs*18|1|0.1|ENSG00000128512|chr7:111728375-111728376|-/G|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4', 'ENST00000476846.1_7:111503332-111846439:-|nuORF'] 122821 7480 VGVNGFGR True PC9_epitope_Rep2 804.4242360491198 804.42312993586 34.144 2 0.0552596498466711 0.0048072254054579 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 70217 22904 LYLPSFFTY True PC9_epitope_Rep4 1149.57464825057 1149.5740749679298 96.319 1 0.05525777853446003 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 89304 7570 RELTPQVVSA True NCI_RA007_Epitope_Rep4 1098.6033226099 1098.6022299358601 35.766 2 0.05523954055236849 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 108520 14301 TEFPGVVV True H1975_Epitope_Rep2 846.4487194614599 846.44762993586 60.159 2 0.05523788564344635 0.0048072254054579 0.9438714419765777 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 21848 10372 ESEDPDYYQY True H1975_Epitope_Rep2 1307.48299226335 1307.4818899358602 44.906 2 0.055235815422276964 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'nc|ENSG00000263001|P78347-5|GTF2I'] 7696 10089 ASQDIIPQLK True NCI_RA007_Epitope_Rep4 1111.62372370131 1111.62262993586 45.657 2 0.05522219571416017 0.0048072254054579 0.9438714419765777 ['ENSG00000093010|ENST00000361682|COMT', 'nc|ENSG00000093010|P21964-2|COMT', 'ENST00000207636.9_1_22:19951681-19956256:+|nuORF'] 89578 14793 RESFPAPVVIL True H1975_Epitope_Rep1 1226.7023083751799 1226.70120993586 62.126 2 0.0552134417934292 0.0048072254054579 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL'] 137510 16424 YLPYPIHQV True PC9_epitope_Rep2 1128.5967806774802 1128.59568993586 68.418 2 0.05521136119897005 0.0048072254054579 0.9438714419765777 ['ENSG00000176444|ENST00000368361|CLK2', 'nc|ENSG00000176444|P49760-3|CLK2', 'ENST00000497188.1_1_1:155234069-155238352:-|nuORF'] 69580 11405 LVTTVTEIAG True H1975_Epitope_Rep3 1002.5597264624199 1002.5591749679301 48.985 1 0.055210513023750366 0.0048072254054579 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF'] 120275 17216 VFPDKGYSF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 71.376 2 0.05517750515525335 0.004830917874396135 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 29232 16273 FVDEPLIHA True PC9_epitope_Rep2 1039.5338460677497 1039.53274993586 67.836 2 0.05517541863299683 0.004830917874396135 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 138661 12606 YRSEEACML True PC9_epitope_Rep5 1100.4630662795998 1100.46196993586 53.489 2 0.05517045303003774 0.004830917874396135 0.9438714419765777 ['ENST00000585357.1_1_19:38780610-38781349:+|nuORF', 'nc|ENSG00000167642|O43291-2|SPINT2', 'ENSG00000167642|ENST00000301244|SPINT2'] 71836 21998 MPFAGLISA True PC9_epitope_Rep5 905.46807500705 905.46696993586 89.641 2 0.055166781541679866 0.004830917874396135 0.9438714419765777 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 86738 16496 QRLDLQIKL True PC9_epitope_Rep2 1125.68699266421 1125.6853349037901 68.693 3 0.05516563313646693 0.004830917874396135 0.9438714419765777 ['nc|ENSG00000140280|Q8IV50-2|LYSMD2', 'ENSG00000140280|ENST00000267838|LYSMD2'] 106552 22235 SVVTSIFGV True PC9_epitope_Rep2 907.5014833103099 907.5009349679301 91.005 1 0.05515394200207552 0.004846957322540775 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 54393 8443 KYQPPPPP True PC9_epitope_Rep1 922.4912529797798 922.49014993586 37.313 2 0.05514426368082822 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'GSE1|p.P829Lfs*26|1|0.21|ENSG00000131149|chr16:85663456-85663457|CC/T|frameshift_variant', 'GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 23982 17706 EYPDRIMNTF True PC9_epitope_Rep4 1284.5808729131597 1284.5802749679299 76.13 1 0.05513559066713665 0.004846957322540775 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 30507 7214 GAHGDAVIL True H1975_Epitope_Rep2 851.4501164437901 851.44900993586 32.683 2 0.05513531316546339 0.004846957322540775 0.9438714419765777 ['ENSG00000162482|ENST00000361640|AKR7A3', 'nc|ENSG00000211454|Q8NHP1|AKR7L', 'ENSG00000053371|ENST00000235835|AKR7A2'] 79273 8667 PGHLQEGFG True PC9_epitope_Rep1 940.4402800360799 940.43918993586 38.177 2 0.05512652546747533 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 124352 16442 VLDSFLQGY True H1975_Epitope_Rep2 1040.51786165044 1040.51676993586 68.464 2 0.0551174657439976 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000186185|Q86Y91-6|KIF18B', 'ENSG00000186185|ENST00000593135|KIF18B'] 35219 5185 GSGTAEVELK True NCI_RA007_Epitope_Rep2 989.50293986229 989.50184993586 24.788 2 0.05511554988968377 0.004846957322540775 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 92312 9924 RQLPAMTAL True NCI_RA007_Epitope_Rep5 999.5535359665099 999.55242993586 44.815 2 0.055114415843388 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 44903 8262 IQDNHDGTYTV True PC9_epitope_Rep3 1261.55749461629 1261.5563899358601 36.755 2 0.05510563692010794 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 57045 8041 LEEGEGPIA True H1975_Epitope_Rep2 913.4392769765699 913.43872496793 35.879 1 0.05510383314992521 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000509178.5_1_5:134117763-134126202:+|nuORF'] 71053 6986 MESRSFYTA True H1975_Epitope_Rep2 1090.4753452154598 1090.4742499358601 31.795 2 0.05509316323828178 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000116260|O00391-2|QSOX1', 'ENSG00000116260|ENST00000367602|QSOX1'] 27507 20384 FPFAPPAAA True PC9_epitope_Rep1 887.4541391950698 887.45304993586 83.23 2 0.055083000305507356 0.004846957322540775 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 16854 7781 EFSGNPIK True PC9_epitope_Rep5 890.4497820906199 890.44868993586 34.875 2 0.05507652743615145 0.004846957322540775 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 18759 12051 ELDPNNAVYY True H1975_Epitope_Rep3 1196.53496826656 1196.53437496793 51.515 1 0.055074304313790956 0.004846957322540775 0.9438714419765777 ['ENSG00000197860|ENST00000381007|SGTB'] 62920 22329 LMYTEVWNNL True PC9_epitope_Rep1 1281.6063593850097 1281.6052699358602 90.702 2 0.05506930082424956 0.004846957322540775 0.9438714419765777 ['ENST00000466599.1_1_7:133979587-133979849:-|nuORF', 'ENSG00000205060|ENST00000378509|SLC35B4'] 454 10592 AALTSDPAV True PC9_epitope_Rep4 843.4337976733099 843.43270993586 48.484 2 0.055041603113728375 0.004846957322540775 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 4595 21706 ALADDDFLTV True PC9_epitope_Rep2 1078.5182555732601 1078.51714993586 88.969 2 0.05502347822672848 0.004846957322540775 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 34979 10718 GRADGYVL True PC9_epitope_Rep1 849.43446637965 849.43336993586 46.116 2 0.05502323683754109 0.004846957322540775 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 70865 19109 MEGLSWLV True H1975_Epitope_Rep1 933.4629896266099 933.4624449679301 79.64 1 0.054995701334222276 0.004846957322540775 0.9438714419765777 ['ENST00000378119.8_1_6:24720562-24720727:-|nuORF'] 11101 4705 DEDKEKTFEEK True NCI_RA007_Epitope_Rep5 1396.6358045066397 1396.63414490379 24.785 3 0.05499320795149711 0.004846957322540775 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 24565 20797 FALPGLLHA True PC9_epitope_Rep5 937.5385375253701 937.53744993586 85.045 2 0.054989639890780824 0.004846957322540775 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 97960 9304 SHQTGVVAL True PC9_epitope_Rep5 910.4872302284999 910.48612993586 40.741 2 0.05498062140414776 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000188807|Q5SNT2-2|TMEM201', 'ENSG00000188807|ENST00000340381|TMEM201'] 124362 17710 VLDSVDVRL True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 73.319 2 0.05496666445245104 0.004846957322540775 0.9438714419765777 ['ENSG00000169105|ENST00000306243|CHST14'] 91733 6415 RPKMQEVVA True PC9_epitope_Rep1 1056.5749996870798 1056.57390993586 29.482 2 0.05496110465423191 0.004846957322540775 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1', 'ENST00000451943.6_1_11:61067610-61070297:-|nuORF', 'ENST00000538470.2_1_11:61067610-61070684:-|nuORF', 'ENST00000540166.5_1_11:61067610-61069753:-|nuORF', 'ENST00000545894.1_1_11:61067610-61068439:-|nuORF'] 64600 12407 LREERAYIL True PC9_epitope_Rep5 1161.6506071554898 1161.64897490379 52.722 3 0.05495998793294141 0.004846957322540775 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 26019 15392 FHDGDSVVF True PC9_epitope_Rep1 1021.4505103666099 1021.44940993586 64.023 2 0.05495327093245576 0.004846957322540775 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant', 'ENST00000483715.5_1_3:49712632-49712743:+|nuORF'] 40041 6341 HQVPAVSSV True PC9_epitope_Rep4 922.4872302285 922.48612993586 31.466 2 0.05494570930535009 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 69464 17123 LVSDSALYF True H1975_Epitope_Rep1 1013.50696261357 1013.50637496793 71.3 1 0.05492614272811673 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000211777|A0A0B4J244|TRAV3'] 104902 18328 STFPQFIKA True PC9_epitope_Rep1 1037.5545815123298 1037.5534899358602 75.287 2 0.0549173526879022 0.004846957322540775 0.9438714419765777 ['ENSG00000040487|ENST00000375153|SLC66A1'] 83074 19930 PYMAKFVVF True PC9_epitope_Rep4 1100.5728744287599 1100.5717699358602 84.795 2 0.05488735137861349 0.004846957322540775 0.9438714419765777 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant', 'CAMK2D-ANK2|1|fusion', 'CAMK2D-ANK2|2|fusion', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3'] 54638 19031 LADPSAFVAA True PC9_epitope_Rep2 960.4916469025999 960.49054993586 78.567 2 0.05487955401632177 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 40642 12794 HTGPVFTV True PC9_epitope_Rep5 856.44430278736 856.44320993586 54.223 2 0.054863036845713344 0.004846957322540775 0.9438714419765777 ['ENST00000547496.5_1_12:89853476-89885774:-|nuORF', 'ENST00000539190.6_1_12:89855074-89919672:-|nuORF', 'nc|ENSG00000139323|Q8TC44-2|POC1B', 'ENSG00000139323|ENST00000313546|POC1B'] 89690 5084 REWVAPEKA True NCI_RA007_Epitope_Rep4 1084.5665431783598 1084.5654499358602 26.064 2 0.05485742002272224 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5'] 32098 8860 GEYGGWYKA True NCI_RA007_Epitope_Rep5 1029.45559574705 1029.45448993586 40.745 2 0.054852912740625336 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 416 20002 AALPNVYEV True PC9_epitope_Rep1 974.5072969667399 974.5067449679301 81.765 1 0.05484924510455017 0.004846957322540775 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 104727 11733 STDISSLY True H1975_Epitope_Rep3 884.41272787556 884.41217496793 50.273 1 0.05484700297689431 0.004846957322540775 0.9438714419765777 ['ENSG00000121486|ENST00000367506|TRMT1L', 'nc|ENSG00000121486|Q7Z2T5-2|TRMT1L'] 105292 16532 STTNGGILTV True PC9_epitope_Rep3 961.50802524273 961.50692993586 68.728 2 0.054842588990544526 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 76901 20248 NVLDHFSEL True PC9_epitope_Rep1 1072.5189242796 1072.5178299358602 82.712 2 0.054839302468193574 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 86561 10903 QRASLEAAI True PC9_epitope_Rep5 957.5243440132099 957.52324993586 46.926 2 0.054814993182065286 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'CON__H-INV:HIT000292931', 'ENST00000449849.2_1_2:203790299-203790389:+|nuORF'] 61735 21736 LLIPGLATA True PC9_epitope_Rep5 867.54295419947 867.54184993586 88.639 2 0.0548141452753165 0.004846957322540775 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 109824 18967 THLESLVEL True PC9_epitope_Rep2 1039.5549754351498 1039.5538699358601 78.321 2 0.05480948723650655 0.004846957322540775 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4'] 119750 5307 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44906993586 25.465 2 0.0547995329390608 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 102828 21039 SQFPGAITL True PC9_epitope_Rep5 932.4967322830399 932.49618496793 85.986 1 0.054790346719214934 0.004846957322540775 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 106444 16634 SVVADTPEL True PC9_epitope_Rep5 929.47057710485 929.46948993586 68.988 2 0.05478461925573886 0.004846957322540775 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1'] 132291 9666 VYLHDFQRF True NCI_RA007_Epitope_Rep3 1223.60874234351 1223.60710490379 45.099 3 0.05478253781571524 0.004846957322540775 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2', 'ENST00000567980.5_1_16:81819579-81955027:+|nuORF', 'PLCG2|p.S821Ifs*21|1|0.26|ENSG00000197943|chr16:81927118-81927119|-/T|frameshift_variant', 'ENST00000569929.5_1_16:81888133-81917132:+|nuORF'] 29043 19640 FTLSHITQL True PC9_epitope_Rep3 1058.5760452329 1058.57494993586 80.782 2 0.05478175310641499 0.004846957322540775 0.9438714419765777 ['ENSG00000148484|ENST00000345264|RSU1'] 11968 14350 DHTLGNII True PC9_epitope_Rep6 881.46068112749 881.45958993586 67.094 2 0.05476276228152066 0.004846957322540775 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 4324 18354 AILTAVHMI True PC9_epitope_Rep4 967.55247333735 967.55136993586 78.665 2 0.05476005520235435 0.004846957322540775 0.9438714419765777 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000553629.5_1_14:24035015-24036984:-|nuORF', 'ENST00000557619.5_1_14:24035015-24036327:-|nuORF', 'ENST00000556743.5_1_14:24034808-24036327:-|nuORF', 'ENST00000556277.5_1_14:24034355-24036984:-|nuORF', 'ENST00000460049.6_1_14:24033375-24036327:-|nuORF', 'ENST00000465445.6_1_14:24034355-24036327:-|nuORF'] 118344 7754 VDFNVPM[Oxidation]K True H1975_Epitope_Rep3 964.4688036634799 964.46770993586 34.81 2 0.054749181615858705 0.004846957322540775 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 37234 11039 GVVDPVHGV True PC9_epitope_Rep5 877.46576650793 877.46466993586 47.449 2 0.05473652949355949 0.004846957322540775 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 114345 10861 TSDEDDLYY True H1975_Epitope_Rep2 1119.42441475807 1119.42330993586 46.807 2 0.054734289696757664 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 31822 9221 GEMWSEQSA True H1975_Epitope_Rep2 1023.39676054159 1023.3956699358599 40.422 2 0.05473381788551713 0.004846957322540775 0.9438714419765777 ['ENSG00000164104|ENST00000296503|HMGB2', 'ENST00000511316.1_1_4:174253953-174254163:-|nuORF'] 109134 22700 TFLDDSGSLNW True PC9_epitope_Rep1 1253.5564319871298 1253.55532993586 92.119 2 0.05473311588588197 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 81787 22411 PSESLILFL True PC9_epitope_Rep4 1017.5746482505699 1017.57354993586 94.435 2 0.05473286188821572 0.004846957322540775 0.9438714419765777 ['ENST00000293778.10_2_17:4636851-4637124:-|nuORF'] 114394 15092 TSDQATLLLY True H1975_Epitope_Rep3 1123.57610480255 1123.5750099358602 63.447 2 0.05472550423405049 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM'] 9704 20159 AYILDTLVF True NCI_RA007_Epitope_Rep4 1053.57464825057 1053.57354993586 87.223 2 0.05472419952804362 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 2223 7857 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.4390649679301 35.169 1 0.0547173183941079 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 34560 20557 GQFGVGFYSA True PC9_epitope_Rep5 1031.4712458111896 1031.47014993586 84.117 2 0.05470743688887647 0.004846957322540775 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 44357 17354 IMPYELTRV True PC9_epitope_Rep4 1120.59506642532 1120.59396993586 74.757 2 0.054689830380931496 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 105023 4535 STIKEVAQA True PC9_epitope_Rep4 945.5131106231698 945.51200993586 23.932 2 0.054686601486883986 0.004846957322540775 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 140117 20194 YVPPELITL True PC9_epitope_Rep6 1043.59029831471 1043.58920993586 90.348 2 0.05468609980495213 0.004846957322540775 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 17604 20570 EHLTMLQVL True PC9_epitope_Rep3 1082.57941636118 1082.57830993586 84.388 2 0.054685296319586615 0.004846957322540775 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 60467 21241 LILNDFPSV True PC9_epitope_Rep4 1016.55424715916 1016.55314993586 89.868 2 0.054682849493710335 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000148297|Q15528-2|MED22', 'ENSG00000148297|ENST00000343730|MED22'] 4124 10896 AHTEMPTTL True PC9_epitope_Rep5 999.46953155903 999.46842993586 46.899 2 0.054682438466489534 0.004846957322540775 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 137888 7340 YPNSGSVSA True PC9_epitope_Rep1 880.39266113732 880.3921149679301 33.045 1 0.05468057093219855 0.004846957322540775 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 120594 11945 VGAGAPVYL True H1975_Epitope_Rep3 845.46470387877 845.4641549679301 51.102 1 0.0546634307738084 0.004846957322540775 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 126690 6568 VPRPETAVA True PC9_epitope_Rep1 938.5185303567798 938.51742993586 30.069 2 0.05464545649935778 0.004846957322540775 0.9438714419765777 ['ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 1482 4629 AEEM[Oxidation]ETGNVA True H1975_Epitope_Rep2 1065.4284549731299 1065.42734993586 22.905 2 0.05464042073352887 0.004846957322540775 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 110323 22259 TIITTLENL True PC9_epitope_Rep2 1016.57537652656 1016.57426993586 91.098 2 0.05462242639481292 0.004846957322540775 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 77519 13941 NYQGHFHLF True PC9_epitope_Rep6 1161.5355774032498 1161.53392490379 65.473 3 0.05461196340911143 0.004846957322540775 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 101627 16962 SPFGTITSA True PC9_epitope_Rep1 879.43379767331 879.43270993586 70.067 2 0.05460246367868998 0.00487048389832562 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 2681 11599 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.47964993586 49.682 2 0.05459778411933364 0.00487048389832562 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 48769 8000 KEQLPPLAA True H1975_Epitope_Rep2 965.5545815123298 965.55348993586 35.721 2 0.054597327032941206 0.00487048389832562 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 105176 12051 STMYPGLPSRL True NCI_RA007_Epitope_Rep4 1220.6223438023198 1220.62124993586 53.355 2 0.054593553156216355 0.00487048389832562 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 138215 10706 YQTEIGQTL True NCI_RA007_Epitope_Rep4 1051.51858992643 1051.51748993586 48.026 2 0.05458215362195577 0.00487048389832562 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 32987 10194 GIVEFSGK True PC9_epitope_Rep1 835.44396843419 835.44286993586 44.089 2 0.054566130176984244 0.00487048389832562 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 94815 13333 RYLTVAAVF True NCI_RA007_Epitope_Rep5 1038.5862159937797 1038.5851099358601 57.971 2 0.05455472908732864 0.004888555456063503 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 83883 10092 QEIAVPVA True NCI_RA007_Epitope_Rep3 825.4596184983299 825.4590749679301 46.788 1 0.054551634028468014 0.004888555456063503 0.9438714419765777 ['ENST00000462391.5_1_10:103541605-103543114:-|nuORF', 'ENSG00000107833|ENST00000370110|NPM3'] 55471 9863 LAVDPNRAV True PC9_epitope_Rep5 953.5294293936499 953.52832993586 42.908 2 0.054550516703841506 0.004888555456063503 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'ENST00000510608.1_1_5:175813700-175815552:-|nuORF', 'nc|ENSG00000048162|Q9Y3C1-3|NOP16', 'nc|ENSG00000048162|Q9Y3C1-2|NOP16', 'ENST00000504821.1_1_5:175813909-175815568:-|nuORF'] 88255 17252 QYESKVFYL True PC9_epitope_Rep4 1175.5862755634298 1175.5851699358602 74.367 2 0.054540311046683616 0.004888555456063503 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 118635 3052 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 16.105 2 0.0545295461773885 0.004888555456063503 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 100126 24380 SLLDELLEV True PC9_epitope_Rep2 1029.55939210925 1029.55828993586 99.344 2 0.05452758771118027 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1', 'SOAT1|p.R253Pfs*31|1|0.16|ENSG00000057252|chr1:179341284-179341285|-/C|frameshift_variant'] 116785 16130 TYLPQSYLI True NCI_RA007_Epitope_Rep4 1096.580461907 1096.57936993586 69.948 2 0.054522033589985176 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000136156|Q9Y287-2|ITM2B', 'ENSG00000136156|ENST00000647800|ITM2B'] 59816 9905 LHDINAQL True PC9_epitope_Rep4 922.4872302285 922.48612993586 45.751 2 0.054519682610623725 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 26643 21000 FLAEDALNTV True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 85.603 2 0.05451548503349547 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000484556.1_1_6:30866836-30867070:+|nuORF'] 139795 18561 YVDDFGVSV True PC9_epitope_Rep6 999.4549270407099 999.45382993586 84.035 2 0.05451548361058606 0.004888555456063503 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 70870 4820 MEGPPRPQA True H1975_Epitope_Rep3 981.47020026537 981.46910993586 23.666 2 0.054502132527866926 0.004888555456063503 0.9438714419765777 ['ENST00000380502.7_2_9:19102712-19102766:-|nuORF'] 52732 15663 KQLEAIDQLHL True PC9_epitope_Rep4 1306.7245003717399 1306.72285490379 68.175 3 0.054496853558277124 0.004888555456063503 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 135893 9074 YESSTASALVA True H1975_Epitope_Rep1 1097.52406922969 1097.52347496793 39.808 1 0.05448886036708821 0.004888555456063503 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 75115 10849 NMVAKVDEV True PC9_epitope_Rep3 1003.5008316873099 1003.49972993586 46.705 2 0.054470811190654625 0.004888555456063503 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 105780 20695 SVIEQIVYV True PC9_epitope_Rep4 1048.580461907 1048.57936993586 87.764 2 0.05446967565014925 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 127516 22081 VQVEDIVFL True PC9_epitope_Rep4 1060.580461907 1060.57987496793 93.15 1 0.05446091789869382 0.004888555456063503 0.9438714419765777 ['ENSG00000197780|ENST00000338366|TAF13'] 30191 19729 FYVGHIDAF True PC9_epitope_Rep2 1067.50763131991 1067.50652993586 81.277 2 0.05445971163166002 0.004888555456063503 0.9438714419765777 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 37663 13038 HAGVISVL True PC9_epitope_Rep4 794.46503823194 794.46394993586 58.045 2 0.05445800868744907 0.004888555456063503 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 11815 11413 DHLPNAAL True PC9_epitope_Rep1 849.43446637965 849.43336993586 48.777 2 0.05444328819568375 0.004888555456063503 0.9438714419765777 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 75437 9306 NQGPHSPIL True PC9_epitope_Rep1 961.4981292653699 961.49702993586 40.651 2 0.054439238360821915 0.004888555456063503 0.9438714419765777 ['ENSG00000100147|ENST00000255784|CCDC134'] 15095 5911 EADHLQEEY True H1975_Epitope_Rep2 1132.46728262956 1132.46618993586 27.723 2 0.05443865791074813 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 52296 10067 KPAEFTVDA True PC9_epitope_Rep5 976.4865615221598 976.48546993586 43.704 2 0.054428905643014225 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 128323 11921 VSDGIIAPGY True H1975_Epitope_Rep2 990.5022115862998 990.5016649679301 50.934 1 0.05442142932521784 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000446622.5_1_2:216199652-216212358:+|nuORF'] 127020 5611 VPYGVGKAA True PC9_epitope_Rep2 860.4756029156398 860.4745099358599 26.968 2 0.054409308825421054 0.004888555456063503 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 68582 22133 LTYGTMVFV True PC9_epitope_Rep1 1029.5205045027299 1029.51997496793 89.947 1 0.05440781421151295 0.004888555456063503 0.9438714419765777 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'nc|ENSG00000161533|Q15067|ACOX1', 'ENST00000589744.1_1_17:73949530-73951667:-|nuORF'] 8682 21834 AVDAFFTAV True PC9_epitope_Rep3 939.4701831820299 939.46908993586 89.285 2 0.05440449732370496 0.004888555456063503 0.9438714419765777 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 47543 8583 IYLSKPTHW True NCI_RA007_Epitope_Rep4 1143.60767971435 1143.60604490379 39.798 3 0.0543952639995308 0.004888555456063503 0.9438714419765777 ['ENSG00000047315|ENST00000314595|POLR2B'] 94554 9569 RYIPTAAAF True NCI_RA007_Epitope_Rep3 1008.5392658013599 1008.5386749679301 44.726 1 0.054391205310364094 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 87958 12095 QVRDVIIAA True PC9_epitope_Rep1 983.5763795860698 983.57528993586 51.383 2 0.054384798072349784 0.004888555456063503 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 91537 12406 RPADVIFAT True PC9_epitope_Rep6 988.5341804209199 988.53308993586 59.146 2 0.05438457450727902 0.004888555456063503 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 31475 10160 GEELAGAIAA True H1975_Epitope_Rep3 900.4552613938798 900.45471496793 44.123 1 0.054379309637446076 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC'] 137495 21227 YLPPGFLSA True PC9_epitope_Rep3 963.50656869075 963.50546993586 86.941 2 0.054372911247154807 0.004888555456063503 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 72908 15268 NAVYTFETL True NCI_RA007_Epitope_Rep5 1056.51277627 1056.51166993586 65.419 2 0.054370642048736074 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 132579 21537 VYPNWAIGL True PC9_epitope_Rep4 1031.5440168286298 1031.54347496793 91.021 1 0.054363109240808255 0.004888555456063503 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 34452 13662 GQATTAYFL True NCI_RA007_Epitope_Rep4 970.47599683846 970.47544496793 59.772 1 0.0543621292056879 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 24770 16721 FAYEGPMYL True H1975_Epitope_Rep2 1089.4841189940098 1089.48357496793 69.554 1 0.05434229507917753 0.004888555456063503 0.9438714419765777 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'RNF145|p.P393Lfs*7|1|0.15|ENSG00000145860|chr5:159163023-159163023|G/-|frameshift_variant'] 1699 5507 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41284496793 26.195 1 0.05432549553379814 0.004888555456063503 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 39270 19444 HLPEELAEL True PC9_epitope_Rep1 1049.53932537101 1049.53822993586 79.605 2 0.0543249952572953 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 76753 18182 NTTDIFQTV True PC9_epitope_Rep6 1037.50293986229 1037.5023749679299 82.577 1 0.05431699564469026 0.004888555456063503 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 40209 6953 HRGTGIAL True PC9_epitope_Rep5 823.46643521427 823.46532993586 31.713 2 0.05430619993043673 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 52026 5881 KLFVGGLK True NCI_RA007_Epitope_Rep3 860.5483739330798 860.54726993586 30.111 2 0.054298477528839297 0.004888555456063503 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 2491 14679 AEQPWPPLPA True H1975_Epitope_Rep2 1104.56039516876 1104.55928993586 61.624 2 0.054292256950200096 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 2770 7537 AEVDAAMAA True H1975_Epitope_Rep2 847.3745685450299 847.3740149679301 33.942 1 0.05427621152688779 0.004888555456063503 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 65788 13846 LSISETYDLK True PC9_epitope_Rep6 1167.6023195503901 1167.6012299358601 65.072 2 0.054274588630950714 0.004888555456063503 0.9438714419765777 ['CON__P34955'] 52479 7709 KPLEPVSTV True PC9_epitope_Rep6 968.55424715916 968.55314993586 38.995 2 0.054272711033409034 0.004888555456063503 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 27322 15535 FMDPASALY True H1975_Epitope_Rep2 1013.45281886573 1013.45172993586 64.909 2 0.05423606131668149 0.004888555456063503 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 13843 12280 DRAGSIVL True PC9_epitope_Rep3 829.46576650793 829.46466993586 52.263 2 0.05422475831496572 0.004888555456063503 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 36061 15016 GVDVTLPRV True PC9_epitope_Rep6 954.5498304850599 954.54872993586 69.785 2 0.05421780080607075 0.004888555456063503 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 39856 6041 HQGVMVGMGQK True PC9_epitope_Rep1 1170.5637833803796 1170.5626899358601 28.05 2 0.054215032856400655 0.004888555456063503 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 126048 13257 VPAPSPLSA True PC9_epitope_Rep5 837.45961849833 837.45852993586 56.003 2 0.054204433170004784 0.004888555456063503 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 126521 18952 VPNPYIISA True PC9_epitope_Rep2 972.5280324113199 972.52692993586 78.263 2 0.05420345200865888 0.004888555456063503 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 7611 8823 ASITALEAK True PC9_epitope_Rep1 902.50729696674 902.50618993586 38.779 2 0.05420100231162577 0.004888555456063503 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 75354 12775 NQCTVQVRL True PC9_epitope_Rep5 1059.54951321523 1059.54840993586 54.148 2 0.05416726857459322 0.004904566320367239 0.9438714419765777 ['ENSG00000130382|ENST00000252674|MLLT1'] 39491 6753 HPADSVVSV True PC9_epitope_Rep6 909.4555957470501 909.45448993586 34.783 2 0.054155254005348624 0.004904566320367239 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 19566 14537 ELRARQLEL True PC9_epitope_Rep5 1126.64585612822 1126.64422490379 60.915 3 0.05415200409189443 0.004904566320367239 0.9438714419765777 ['ENST00000557266.5_1_15:91500194-91504996:+|nuORF', 'ENSG00000166965|ENST00000394258|RCCD1', 'ENST00000555737.5_1_15:91500194-91503934:+|nuORF'] 101602 8566 SPFAEGTSA True PC9_epitope_Rep4 865.38176210045 865.3812149679301 40.429 1 0.05414738667368151 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 9634 19459 AYGGAFYAF True PC9_epitope_Rep6 965.42831837005 965.4277649679301 87.512 1 0.0541456127767205 0.004904566320367239 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 113015 15605 TPTPVPVV True PC9_epitope_Rep1 808.4694549060399 808.46890496793 64.844 1 0.05412829552952264 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 116280 9430 TVVKAISGV True PC9_epitope_Rep4 872.53311779176 872.53202993586 43.883 2 0.05410774583250455 0.004904566320367239 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 9434 21363 AVVSILLLSV True PC9_epitope_Rep2 1012.65323292444 1012.65212993586 87.641 2 0.05409627471941056 0.004904566320367239 0.9438714419765777 ['ENSG00000198178|ENST00000360345|CLEC4C'] 26693 14631 FLDDSTALY True H1975_Epitope_Rep1 1043.48114178855 1043.48057496793 61.488 1 0.05409189723353889 0.004904566320367239 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2'] 2779 7182 AEVDAAMAA True NCI_RA007_Epitope_Rep3 847.3745685450299 847.3740149679301 35.363 1 0.05408871406219164 0.004904566320367239 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 73007 9182 NDEELNKLLGK True NCI_RA007_Epitope_Rep3 1271.6721304457099 1271.67049490379 43.207 3 0.05407867453966119 0.004904566320367239 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 35456 15543 GTELGNELFY True H1975_Epitope_Rep2 1141.5291546101298 1141.52857496793 64.941 1 0.05407375976819122 0.004904566320367239 0.9438714419765777 ['ENSG00000126821|ENST00000247225|SGPP1'] 96879 8337 SESVTEITA True H1975_Epitope_Rep3 935.44475627983 935.4442049679301 37.053 1 0.05405996064252537 0.004904566320367239 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 23718 16339 EYIKFLRSI True PC9_epitope_Rep6 1167.6651945904698 1167.66355490379 75.22 3 0.054045200447198696 0.004904566320367239 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 75713 19453 NQVSTIVSL True PC9_epitope_Rep2 959.52876068731 959.52766993586 80.207 2 0.054011680110777234 0.004904566320367239 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HECTD1|p.L328Ffs*29|1|0.3|ENSG00000092148|chr14:31173328-31173329|-/AA|frameshift_variant'] 77452 11248 NYNNQSSNFGP True PC9_epitope_Rep5 1240.51087877704 1240.50978993586 48.256 2 0.054002382905337556 0.004904566320367239 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF'] 29142 9252 FTTRSTFST True PC9_epitope_Rep5 1046.50327421546 1046.5021699358601 40.536 2 0.053993799357515575 0.004904566320367239 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 112782 7002 TPLHVTSPSSA True PC9_epitope_Rep2 1095.55603806431 1095.5549499358601 32.335 2 0.05399243150191795 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 34984 10818 GRADGYVL True PC9_epitope_Rep3 849.43446637965 849.43336993586 46.581 2 0.05397432321577384 0.004904566320367239 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 129055 10494 VTANTMENV True PC9_epitope_Rep1 977.44879611445 977.44768993586 45.255 2 0.05396843739857749 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 8263 4127 ATIQGAYAR True NCI_RA007_Epitope_Rep3 949.4981292653698 949.49702993586 22.789 2 0.05396156852233541 0.004904566320367239 0.9438714419765777 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF', 'ENST00000508276.1_1_4:2933242-2933551:-|nuORF'] 95987 8275 SEAEKVYIV True H1975_Epitope_Rep2 1036.5440763982797 1036.5429699358601 36.78 2 0.05395061376145977 0.004904566320367239 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7'] 45512 11798 ISESSSIY True H1975_Epitope_Rep2 884.41272787556 884.41217496793 50.456 1 0.0539428855060526 0.004904566320367239 0.9438714419765777 ['CFHR4|p.T541Kfs*30|2|0.26|ENSG00000134365|chr1:196918294-196918294|C/-|frameshift_variant', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4', 'ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4'] 71002 9829 MEQQTLSIA True H1975_Epitope_Rep2 1019.4957463068699 1019.49464993586 42.793 2 0.05394245674682691 0.004904566320367239 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 138086 4277 YQEHPDLAR True NCI_RA007_Epitope_Rep2 1127.5359713260698 1127.53432490379 21.276 3 0.05394057046201449 0.004904566320367239 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 108978 7849 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46963496793 35.169 1 0.05393625275077933 0.004904566320367239 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 30074 15219 FYMDTSHLF True NCI_RA007_Epitope_Rep4 1159.5008316873098 1159.4997299358602 66.163 2 0.053935375662081834 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 54677 8306 LAEAALELREE True NCI_RA007_Epitope_Rep2 1242.6455813446998 1242.64448993586 36.948 2 0.05392676387030765 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 70391 18347 LYQFNPAFF True NCI_RA007_Epitope_Rep3 1145.5545815123298 1145.5534899358602 80.347 2 0.05392027599208479 0.004904566320367239 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 102499 6619 SPYIPPHAA True PC9_epitope_Rep6 951.48141657207 951.48030993586 34.174 2 0.053900704848973816 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 8316 15690 ATLNIIHSV True PC9_epitope_Rep5 966.5498304850599 966.54872993586 65.361 2 0.05388897841519735 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 96941 14940 SEVEIAWPA True H1975_Epitope_Rep2 1000.4865615221598 1000.48546993586 62.618 2 0.05387708653047476 0.004904566320367239 0.9438714419765777 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 65002 7729 LSDGVAVLK True NCI_RA007_Epitope_Rep4 900.5280324113199 900.52692993586 36.402 2 0.0538770003885019 0.004904566320367239 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 37722 11579 HASDRIIAL True PC9_epitope_Rep1 994.5559784946599 994.55488993586 49.417 2 0.05387333466809001 0.004904566320367239 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 13964 9597 DRM[Oxidation]VGQVL True PC9_epitope_Rep5 932.4749516730798 932.47384993586 41.877 2 0.05387033532602077 0.004904566320367239 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'EIF2S3|p.G359A|1|0.39|ENSG00000130741|chrX:24071621-24071621|G/C|missense_variant'] 56676 4965 LEAATQVKP True H1975_Epitope_Rep3 955.5338460677499 955.53274993586 24.225 2 0.053862741675265384 0.004904566320367239 0.9438714419765777 ['ENSG00000137100|ENST00000259632|DCTN3', 'ENST00000481438.1_1_9:34613781-34613940:-|nuORF', 'ENST00000479399.5_1_9:34613781-34614146:-|nuORF', 'ENST00000472418.5_1_9:34613781-34614781:-|nuORF', 'nc|ENSG00000137100|O75935-3|DCTN3'] 37235 9272 GVVDPVHGV True PC9_epitope_Rep6 877.46576650793 877.46466993586 45.819 2 0.053861390910546626 0.004904566320367239 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 26585 8426 FKDLGEEHFK True PC9_epitope_Rep5 1248.6138872935996 1248.61278993586 37.351 2 0.05384324850758544 0.004904566320367239 0.9438714419765777 ['CON__P02769'] 98356 7298 SIHENFSQA True PC9_epitope_Rep3 1031.4672230599099 1031.4661299358602 33.078 2 0.053842075239152 0.004904566320367239 0.9438714419765777 ['ENSG00000125633|ENST00000376300|CCDC93'] 75304 19431 NPTLILAA True PC9_epitope_Rep5 811.4803539429099 811.47980496793 79.792 1 0.0538388076704541 0.004904566320367239 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 46495 17924 ITPENLPQI True PC9_epitope_Rep6 1023.5600608155898 1023.5589699358601 81.571 2 0.053798480830716575 0.004904566320367239 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 1214 6627 AEDEPPAPP True H1975_Epitope_Rep3 921.4079768482899 921.40686993586 30.443 2 0.05379540606620247 0.004904566320367239 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 75114 9641 NMVAKVDEV True PC9_epitope_Rep2 1003.5008316873099 1003.49972993586 42.425 2 0.05379532552127048 0.004904566320367239 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 117560 10673 VAGGAVYL True H1975_Epitope_Rep2 748.4119400299201 748.41139496793 46.078 1 0.05379334275685967 0.004904566320367239 0.9438714419765777 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 25417 5539 FEKPDSVAA True H1975_Epitope_Rep2 962.4709114580198 962.46980993586 26.313 2 0.05378591725802162 0.004904566320367239 0.9438714419765777 ['ENST00000482023.5_1_1:249144411-249145095:-|nuORF', 'ENST00000533927.5_1_1:249144411-249149911:-|nuORF', 'nc|ENSG00000171163|Q9BU19-3|ZNF692', 'nc|ENSG00000171163|Q9BU19-2|ZNF692', 'ENSG00000171163|ENST00000306601|ZNF692', 'nc|ENSG00000171163|Q9BU19-5|ZNF692'] 86234 16091 QPYMPTVSA True PC9_epitope_Rep3 992.4637179025999 992.46262993586 67.043 2 0.053780003147985034 0.004904566320367239 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 43937 20865 ILEPSLYTV True PC9_epitope_Rep2 1033.5695628701299 1033.56846993586 85.703 2 0.05377525425505791 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'ENST00000553009.5_1_12:54718935-54736154:+|nuORF'] 126592 6158 VPPPPPIAR True H1975_Epitope_Rep1 942.56508662638 942.56398993586 28.756 2 0.05375585197404228 0.004904566320367239 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 25871 6826 FGHGAEDSL True NCI_RA007_Epitope_Rep2 931.40356017419 931.40246993586 31.166 2 0.053748369824848805 0.004904566320367239 0.9438714419765777 ['ENSG00000173432|ENST00000356524|SAA1'] 11872 10241 DHNSLDSSL True PC9_epitope_Rep3 986.4305031980201 986.42940993586 44.342 2 0.05374230726067816 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 39185 5951 HLGALLAR True NCI_RA007_Epitope_Rep5 849.51847078713 849.51736993586 29.574 2 0.053739354737126335 0.004904566320367239 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 22932 6618 EVGSIIGK True NCI_RA007_Epitope_Rep2 801.45961849833 801.45852993586 30.351 2 0.05373825861571595 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000498121.1_1_21:47289198-47321357:+|nuORF', 'ENST00000550910.1_1_12:53848575-53849202:+|nuORF', 'ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3', 'nc|ENSG00000090097|P57723-2|PCBP4', 'ENSG00000090097|ENST00000461554|PCBP4', 'ENST00000492809.5_1_3:51994845-51995337:-|nuORF', 'ENST00000498822.5_1_3:51994845-51996905:-|nuORF'] 48353 7833 KEAEELLPA True H1975_Epitope_Rep2 998.5284263341398 998.5273299358599 35.079 2 0.0537185618413285 0.004904566320367239 0.9438714419765777 ['ENSG00000135476|ENST00000257934|ESPL1', 'ESPL1|p.E1511Kfs*24|1|0.2|ENSG00000135476|chr12:53288323-53288323|G/-|frameshift_variant'] 96221 4600 SEEPETPAA True H1975_Epitope_Rep2 929.3978060874099 929.39670993586 22.798 2 0.053705129665894656 0.004904566320367239 0.9438714419765777 ['ENSG00000174109|ENST00000442039|UQCC4', 'ENST00000563974.1_2_16:1470249-1470717:-|nuORF'] 27181 21623 FLSQDIITV True PC9_epitope_Rep1 1034.5648118428599 1034.56370993586 88.0 2 0.05370382831941652 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000143839|P00797-2|REN', 'ENSG00000143839|ENST00000272190|REN'] 95123 7945 RYVPRASYF True NCI_RA007_Epitope_Rep4 1157.5981776598098 1157.59654490379 37.304 3 0.053702342560400206 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 61139 19346 LLDELPMIY True H1975_Epitope_Rep2 1105.57293399841 1105.57182993586 80.293 2 0.05369919036349889 0.004904566320367239 0.9438714419765777 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 86231 15701 QPYMPTVSA True PC9_epitope_Rep2 992.4637179025999 992.46262993586 65.67 2 0.05369792997930874 0.004904566320367239 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 26041 8810 FHDKYGNAVL True PC9_epitope_Rep4 1162.57710786206 1162.5754649037901 41.412 3 0.05369037699049785 0.004904566320367239 0.9438714419765777 ['ENST00000475465.1_1_X:77154999-77158279:+|nuORF', 'ENSG00000131174|ENST00000650309|COX7B', 'ENSG00000170516|ENST00000355591|COX7B2'] 24554 20876 FALPGLLHA True PC9_epitope_Rep1 937.5385375253701 937.53744993586 85.122 2 0.053673472881040456 0.004904566320367239 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 72197 10675 MRSDTPAML True PC9_epitope_Rep2 1020.47323704048 1020.47212993586 46.374 2 0.05367248902821689 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 83671 9202 QEAISVVA True H1975_Epitope_Rep2 815.4388830537499 815.43833496793 40.349 1 0.05366768211125764 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B'] 108858 9436 TERIRSIEAL True PC9_epitope_Rep2 1186.6669854956199 1186.6653449037901 41.634 3 0.05366453210062847 0.004904566320367239 0.9438714419765777 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 109537 10692 THANALTVM True PC9_epitope_Rep1 956.4749512926401 956.47384993586 46.017 2 0.053661016302815716 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2', 'ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1'] 40368 3990 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 21.577 3 0.05365436465749621 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 25340 13512 FEFNDGAIA True H1975_Epitope_Rep2 982.4396113297397 982.4390649679301 57.109 1 0.05364648390826557 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 71350 12332 MHSIGGVQV True PC9_epitope_Rep5 926.4643866089399 926.46328993586 52.428 2 0.05364002027387062 0.004904566320367239 0.9438714419765777 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant', 'LRBA|p.L476I|1|0.18|ENSG00000198589|chr4:150908401-150908401|G/T|missense_variant'] 71005 9776 MEQQTLSIA True H1975_Epitope_Rep3 1019.4957463068699 1019.4951749679301 42.626 1 0.053627060063801926 0.004904566320367239 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 47779 12216 IYQRDPLKL True PC9_epitope_Rep5 1144.6604435631998 1144.65880490379 51.976 3 0.053621159778388286 0.004904566320367239 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 70742 17208 MEALPLLAA True H1975_Epitope_Rep2 927.5099398190299 927.50884993586 71.481 2 0.0536064656856821 0.004916136495083863 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 31791 14590 GELTMTFPA True H1975_Epitope_Rep2 965.4528188657299 965.45172993586 61.276 2 0.05360395295798615 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 137493 20971 YLPPGFLSA True PC9_epitope_Rep2 963.50656869075 963.5060249679301 86.115 1 0.05360153090424072 0.004916136495083863 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 72806 16279 NAIGSASVVTV True PC9_epitope_Rep2 1016.55022440788 1016.54912993586 67.861 2 0.05359013918491445 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF'] 2719 5565 AETPGTVSP True H1975_Epitope_Rep2 857.41306222873 857.4125149679301 26.415 1 0.053589538265035326 0.004916136495083863 0.9438714419765777 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 32349 17356 GGDDSFNTF True PC9_epitope_Rep1 958.3668403123 958.36574993586 71.57 2 0.05358600757952397 0.004916136495083863 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 36772 9943 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 43.234 2 0.05358071699799557 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 17691 17775 EHSLPTLGL True PC9_epitope_Rep2 965.51819600361 965.51708993586 73.66 2 0.053557222542449906 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 54307 21982 KYPSPFFVF True PC9_epitope_Rep1 1130.5800679841798 1130.5794749679299 89.374 1 0.05354819191341322 0.004916136495083863 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 95658 10614 SAVPPGTSL True PC9_epitope_Rep6 827.43888305375 827.43778993586 51.646 2 0.053547014720327656 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 48361 8173 KEAIETIVA True H1975_Epitope_Rep1 972.5491617787198 972.54861496793 36.378 1 0.05354598717774245 0.004916136495083863 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 14938 11381 DYMKTTSNF True PC9_epitope_Rep4 1105.47501086229 1105.47390993586 51.549 2 0.05354582848823866 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000165525|O60524-4|NEMF', 'nc|ENSG00000165525|O60524-3|NEMF', 'ENSG00000165525|ENST00000298310|NEMF'] 31530 13680 GEFGGFGSV True NCI_RA007_Epitope_Rep2 855.3762827971899 855.37573496793 57.855 1 0.053532467956518115 0.004916136495083863 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 30270 6937 GAAKDLPGV True PC9_epitope_Rep6 826.4548674710599 826.45376993586 35.626 2 0.053515307343122674 0.004916136495083863 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 44134 20096 ILPEELQTL True PC9_epitope_Rep4 1054.5910265907 1054.58992993586 85.431 2 0.053504795463723026 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000198315|Q15776-2|ZKSCAN8', 'ENSG00000198315|ENST00000330236|ZKSCAN8'] 17727 6389 EHSTEGSVSL True PC9_epitope_Rep2 1044.47236801 1044.4712699358602 29.982 2 0.053501976530672644 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 105416 17390 SVAESLNYV True PC9_epitope_Rep2 980.48147614172 980.48036993586 72.152 2 0.05349865678776099 0.004916136495083863 0.9438714419765777 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 48500 7984 KEFIKIVEA True NCI_RA007_Epitope_Rep5 1075.62774645259 1075.62664993586 37.397 2 0.05346458640345564 0.004916136495083863 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 48351 6879 KEADLPMTAA True NCI_RA007_Epitope_Rep3 1045.51139637101 1045.51028993586 34.166 2 0.053442646788605844 0.004916136495083863 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 53831 17441 KYGFGYQL True PC9_epitope_Rep1 974.48616759934 974.48506993586 71.884 2 0.05343958117529968 0.004916136495083863 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2', 'nc|ENSG00000185988|Q496M5-2|PLK5', 'ENSG00000185988|ENST00000454744|PLK5'] 134863 11360 YAAGVHSVL True PC9_epitope_Rep5 915.4814165720701 915.48030993586 48.692 2 0.053406693303205126 0.004916136495083863 0.9438714419765777 ['ENSG00000242802|ENST00000649063|AP5Z1', 'ENST00000490487.1_1_7:4829477-4830874:+|nuORF'] 70250 16785 LYMRIRDNW True PC9_epitope_Rep5 1265.6339115455298 1265.63227490379 69.569 3 0.05339098826774363 0.004916136495083863 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'ENST00000557566.1_1_14:78045296-78063654:-|nuORF', 'SPTLC3|p.R116T|1|0.31|ENSG00000172296|chr20:13072299-13072299|G/C|missense_variant', 'ENSG00000172296|ENST00000399002|SPTLC3'] 31465 10100 GEEEPPALP True H1975_Epitope_Rep3 937.4392769765698 937.43872496793 43.89 1 0.053386571560668644 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 88381 10940 QYNPKFQTL True PC9_epitope_Rep6 1137.58185888933 1137.5807699358602 52.955 2 0.05335989915916674 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'ENST00000496324.5_1_1:155642327-155650230:-|nuORF', 'nc|ENSG00000116580|Q3T8J9-2|GON4L', 'nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 48049 18733 KALQFLEEV True PC9_epitope_Rep4 1075.5913609438699 1075.59077496793 80.138 1 0.05335601117119028 0.004916136495083863 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 88371 4523 QYNPHVHQL True PC9_epitope_Rep4 1134.55704112382 1134.55540490379 23.886 3 0.05334596521836464 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 107213 14019 SYPDNFLHI True NCI_RA007_Epitope_Rep5 1104.52400966004 1104.52290993586 60.616 2 0.05334494007042976 0.004916136495083863 0.9438714419765777 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5'] 26923 17771 FLGYPITL True H1975_Epitope_Rep1 922.5164050984599 922.5158549679301 73.976 1 0.05333102688924757 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 47860 9431 IYTIDGSRK True PC9_epitope_Rep2 1051.56620882519 1051.5651099358602 41.615 2 0.05331942528745524 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2', 'nc|ENSG00000077279|O43602-2|DCX', 'nc|ENSG00000077279|O43602|DCX', 'ENSG00000077279|ENST00000636035|DCX'] 39062 5012 HKVISGTTL True NCI_RA007_Epitope_Rep4 954.5498304850599 954.54872993586 25.763 2 0.05326954927402942 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-6|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'nc|ENSG00000040341|Q9NUL3-4|STAU2'] 7926 10388 ATDDSLYY True H1975_Epitope_Rep2 946.39199243098 946.39088993586 44.968 2 0.053253634863173756 0.004916136495083863 0.9438714419765777 ['ENSG00000149260|ENST00000648180|CAPN5'] 49079 6074 KFTPVASKF True NCI_RA007_Epitope_Rep3 1023.5753169569099 1023.57420993586 30.874 2 0.05324031482664902 0.004916136495083863 0.9438714419765777 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX', 'ENST00000446634.1_1_7:143080130-143081191:+|nuORF'] 41112 17398 HYMPPPYASL True PC9_epitope_Rep5 1174.5481162328997 1174.5470099358602 71.922 2 0.053235799636353345 0.004916136495083863 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 120854 14117 VGDPSVHLL True PC9_epitope_Rep4 935.5076313199099 935.50652993586 62.207 2 0.05323394801370582 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 95233 13673 SADDTYLQL True NCI_RA007_Epitope_Rep4 1024.47130538084 1024.4707749679299 59.816 1 0.053228169509161316 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7'] 89235 6039 REIVMTQSP True NCI_RA007_Epitope_Rep5 1059.5382798251899 1059.5371899358602 29.911 2 0.05322600795383583 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000243063|A0A075B6H7|IGKV3-7'] 103535 17716 SRDDNMFQI True PC9_epitope_Rep3 1124.49205790876 1124.4909699358602 73.341 2 0.05322259036924852 0.004916136495083863 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 88973 3498 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 18.304 2 0.0532172035951942 0.004916136495083863 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 16470 12294 EELSNVLAA True H1975_Epitope_Rep2 944.4814761417199 944.48036993586 52.372 2 0.053211188143942496 0.004916136495083863 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 93653 10302 RTFEKIEEV True PC9_epitope_Rep3 1149.60298825673 1149.60133490379 44.573 3 0.05321062688673126 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 5236 10324 ALQEMVHQV True PC9_epitope_Rep6 1053.52771514149 1053.52660993586 50.411 2 0.053209703740711635 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 76475 14065 NTDFGDEFY True H1975_Epitope_Rep2 1106.4192698079798 1106.41867496793 59.253 1 0.05320097966938285 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 96415 10386 SEIDQVVPA True H1975_Epitope_Rep2 956.4814761417199 956.48036993586 44.961 2 0.05317871447559508 0.004916136495083863 0.9438714419765777 ['ENSG00000162607|ENST00000339950|USP1'] 75567 10358 NQMPTQPQV True PC9_epitope_Rep4 1041.49132963277 1041.49022993586 47.54 2 0.053163475261316664 0.004916136495083863 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 1190 8082 AEDDLNTVAA True H1975_Epitope_Rep2 1017.46146897313 1017.46036993586 36.034 2 0.053148552633464526 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 74912 19931 NLSEGVLSV True PC9_epitope_Rep1 916.48656152216 916.48601496793 81.485 1 0.05313353119903842 0.004916136495083863 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000531161.5_1_11:44146432-44228372:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 1394 14539 AEEFPNLAV True H1975_Epitope_Rep1 988.4865615221598 988.48546993586 61.129 2 0.0531281592922641 0.004916136495083863 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 26721 16613 FLDGNELTL True NCI_RA007_Epitope_Rep2 1020.51277627 1020.51227496793 69.352 1 0.05310664079850649 0.004916136495083863 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 53550 7347 KVQNYTVNI True NCI_RA007_Epitope_Rep5 1077.58185888933 1077.5807699358602 34.939 2 0.053101382025532017 0.004916136495083863 0.9438714419765777 ['ENSG00000101544|ENST00000262198|ADNP2'] 132382 18919 VYMPDHSYVTI True PC9_epitope_Rep5 1323.61692406871 1323.6158299358601 77.793 2 0.05306142048047853 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1', 'ENST00000545893.5_1_17:38345052-38350037:+|nuORF'] 94813 12815 RYLTVAAVF True NCI_RA007_Epitope_Rep3 1038.5862159937797 1038.5851099358601 57.651 2 0.053060220616408284 0.004916136495083863 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 125048 15787 VLPGHFNTF True PC9_epitope_Rep2 1030.5236157372199 1030.5225099358602 65.989 2 0.053057694575211846 0.004916136495083863 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 108709 3727 TEM[Oxidation]EHEVAC True H1975_Epitope_Rep2 1063.39504666987 1063.39394993586 19.331 2 0.05304402829670466 0.004916136495083863 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000414411.3_1_11:61081295-61081943:-|nuORF'] 88972 3426 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 17.964 2 0.053040269245523415 0.004916136495083863 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 133326 15900 WESEPHPYVFF True H1975_Epitope_Rep1 1436.6401020414398 1436.63900993586 66.469 2 0.05303351341105063 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 7614 8857 ASITALEAK True PC9_epitope_Rep3 902.50729696674 902.50618993586 39.02 2 0.05301006414179646 0.004916136495083863 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 7636 10182 ASLMHSFILK True NCI_RA007_Epitope_Rep3 1145.6267009067699 1145.62504490379 47.137 3 0.05300732433764629 0.004916136495083863 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 75889 8683 NRDQYSHLL True PC9_epitope_Rep2 1144.56252042708 1144.56088490379 38.764 3 0.05299994119944629 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 34728 7387 GQNPTEAEL True NCI_RA007_Epitope_Rep4 957.44033960573 957.4397949679301 35.056 1 0.05299487365552109 0.004916136495083863 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 26348 19591 FIFSDTHEL True PC9_epitope_Rep5 1107.52367530687 1107.52256993586 80.409 2 0.05298466799720203 0.004916136495083863 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 2215 7653 AENVAVPEA True H1975_Epitope_Rep1 898.4396113297399 898.4390649679301 34.415 1 0.05297220362593049 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 118145 18214 VAVGEFQEV True PC9_epitope_Rep1 976.48656152216 976.48546993586 74.851 2 0.05297213701957171 0.004916136495083863 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 92299 7607 RQLGSKYIL True NCI_RA007_Epitope_Rep4 1076.6342288153598 1076.63312993586 35.913 2 0.05293710183415742 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 42246 8249 IEHGDLELA True H1975_Epitope_Rep2 995.4923751785899 995.49126993586 36.683 2 0.05291046949556164 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT'] 100449 23017 SLPEVLPIL True PC9_epitope_Rep2 979.5953836951498 979.5948349679301 94.028 1 0.0529080747925028 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 39183 5767 HLGALLAR True NCI_RA007_Epitope_Rep5 849.51847078713 849.51736993586 28.87 2 0.05289077129714095 0.004916136495083863 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 123172 9872 VHGPPVQL True PC9_epitope_Rep4 845.47593726881 845.47484993586 45.623 2 0.05288333924813418 0.004916136495083863 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 67032 18310 LTAPALALA True PC9_epitope_Rep6 839.5116540711899 839.51110496793 83.072 1 0.052845125460646264 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 69013 7424 LVHELDEAEYR True NCI_RA007_Epitope_Rep2 1372.6622940379998 1372.6606349037902 33.505 3 0.052833631714555795 0.004916136495083863 0.9438714419765777 ['ENSG00000092010|ENST00000206451|PSME1', 'nc|ENSG00000092010|Q06323-3|PSME1', 'nc|ENSG00000092010|Q06323-2|PSME1'] 53860 14625 KYGSVTVW True PC9_epitope_Rep5 938.48616759934 938.48506993586 61.257 2 0.05282712328633666 0.004916136495083863 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 104123 18231 SRYPDQWIV True PC9_epitope_Rep2 1162.57710786206 1162.5760099358602 75.443 2 0.052819474464227065 0.004916136495083863 0.9438714419765777 ['ENSG00000173598|ENST00000415493|NUDT4', 'ENSG00000177144|ENST00000322209|NUDT4B'] 69512 19185 LVSPASFENV True PC9_epitope_Rep4 1061.5393253710101 1061.53822993586 81.893 2 0.05281660815606983 0.004916136495083863 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 100404 13060 SLNRYFIKV True PC9_epitope_Rep6 1138.6498788795 1138.6482449037899 61.841 3 0.05281088263342476 0.004916136495083863 0.9438714419765777 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENSG00000141568|ENST00000335255|FOXK2', 'nc|ENSG00000141568|Q01167-2|FOXK2'] 117804 22494 VAMLPGLAL True PC9_epitope_Rep2 883.5201105799099 883.51900993586 92.012 2 0.052801520492569455 0.004916136495083863 0.9438714419765777 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 48051 17591 KALQFLEEV True PC9_epitope_Rep6 1075.5913609438699 1075.59026993586 80.306 2 0.052800264188033345 0.004916136495083863 0.9438714419765777 ['ENSG00000146731|ENST00000275603|CCT6A', 'nc|ENSG00000146731|P40227-2|CCT6A', 'CCT6A|p.I274*|1|0.15|ENSG00000146731|chr7:56058450-56058450|A/-|frameshift_variant'] 71837 22015 MPFAGLISA True PC9_epitope_Rep5 905.46807500705 905.4675249679301 89.707 1 0.05279306923314953 0.004916136495083863 0.9438714419765777 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 108321 6998 TEDLRKYVT True H1975_Epitope_Rep2 1123.5873381925899 1123.58569490379 31.842 3 0.0527895063943734 0.004916136495083863 0.9438714419765777 ['ENSG00000104331|ENST00000262644|BPNT2'] 65583 12649 LSGHLETVIL True NCI_RA007_Epitope_Rep2 1080.61791004488 1080.6168099358601 53.814 2 0.05278528263998864 0.004916136495083863 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 1345 12109 AEEDPPWAP True H1975_Epitope_Rep2 1010.4345259492999 1010.43342993586 51.66 2 0.052784747247662175 0.004916136495083863 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 107371 14203 SYSMIVNNL True NCI_RA007_Epitope_Rep4 1039.50083168731 1039.4997299358602 61.913 2 0.05278142797124691 0.004916136495083863 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 132181 15142 VYISNGQVL True PC9_epitope_Rep6 991.5338460677498 991.53274993586 70.309 2 0.05277338392440532 0.004916136495083863 0.9438714419765777 ['ENST00000487571.1_1_3:53922418-53925815:-|nuORF', 'ENSG00000113811|ENST00000495461|SELENOK'] 9454 5770 AVVVVDDR True PC9_epitope_Rep2 871.4763311916298 871.4752299358599 27.587 2 0.052773309131736786 0.004916136495083863 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'PSPC1|p.E183Q|1|0.14|ENSG00000121390|chr13:19772369-19772369|C/G|missense_variant'] 140865 11850 YYTPITPHL True NCI_RA007_Epitope_Rep4 1103.56514619603 1103.56404993586 52.561 2 0.05276975233918307 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 17088 10852 EGRDTHYLI True PC9_epitope_Rep5 1102.54072235334 1102.5396299358601 46.73 2 0.052761219786758434 0.004916136495083863 0.9438714419765777 ['TENM1|p.F2575L|1|0.89|ENSG00000009694|chrX:124380991-124380991|A/G|missense_variant'] 86069 15103 QPMAVVQSV True PC9_epitope_Rep5 957.4953523840499 957.49424993586 63.1 2 0.05276024173613037 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'ENSG00000140464|ENST00000268058|PML'] 46774 14122 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.4580849679301 59.331 1 0.0527497615835537 0.004916136495083863 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 90738 9550 RKQMVIDVL True NCI_RA007_Epitope_Rep1 1100.6375999436398 1100.6365099358602 41.145 2 0.05274932871181106 0.004916136495083863 0.9438714419765777 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 106728 12739 SYDPDFNQL True NCI_RA007_Epitope_Rep4 1097.46655435357 1097.46544993586 56.059 2 0.0527368139424593 0.004916136495083863 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 30614 7248 GALALEEK True PC9_epitope_Rep3 829.4545331178899 829.45342993586 32.89 2 0.05272339370750002 0.004916136495083863 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 39193 9346 HLGALLAR True PC9_epitope_Rep5 849.51847078713 849.51736993586 40.902 2 0.05272038543460794 0.004916136495083863 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 18817 12748 ELEDNLLY True H1975_Epitope_Rep2 1007.4811417885498 1007.48004993586 54.138 2 0.05270842438285551 0.004916136495083863 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 126323 10670 VPKFDQNLD True PC9_epitope_Rep4 1074.53457434374 1074.53346993586 48.79 2 0.052700112294147096 0.004916136495083863 0.9438714419765777 ['ENSG00000136943|ENST00000259470|CTSV'] 74092 15882 NHVISPLL True PC9_epitope_Rep5 891.5178020807899 891.51670993586 66.08 2 0.052698906532730544 0.004916136495083863 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 118634 4960 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 24.162 2 0.052689476977660965 0.004916136495083863 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 5506 13982 [Acetylation]-AM[Oxidation]VSEFLK True H1975_Epitope_Rep3 981.4841196907499 981.48357496793 59.1 1 0.05267803905285596 0.004916136495083863 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 44824 19900 IPVSGITVV True PC9_epitope_Rep3 883.53786881903 883.53676993586 81.786 2 0.052672516125979923 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 33388 15321 GLFDEYGSK True PC9_epitope_Rep3 1014.4658260775799 1014.46472993586 64.085 2 0.05266135355738216 0.004916136495083863 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF', 'ENST00000415545.2_1_1:92108345-92109332:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 8024 7345 ATDRFRSLY True H1975_Epitope_Rep3 1127.5723568347898 1127.57071490379 33.229 3 0.052653794140923006 0.004916136495083863 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-10|DST'] 68821 7763 LVDSNNPKI True PC9_epitope_Rep5 998.53965972418 998.53856993586 34.804 2 0.052647124407451396 0.004916136495083863 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 102375 13411 SPVPIAPTA True PC9_epitope_Rep5 851.47526856247 851.47416993586 56.602 2 0.0526470951075089 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 101896 10125 SPLKHFVTA True PC9_epitope_Rep1 998.5549158654999 998.55380993586 43.819 2 0.05264427747483664 0.004916136495083863 0.9438714419765777 ['ENSG00000116688|ENST00000235329|MFN2', 'ENST00000497302.1_1_1:12042112-12052340:+|nuORF'] 70692 4552 [Acetylation]-M[Oxidation]DKSELVQK True NCI_RA007_Epitope_Rep2 1134.5590755361598 1134.55796993586 22.334 2 0.052643057442578335 0.004916136495083863 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB'] 131626 11166 VWAAVPGKTF True NCI_RA007_Epitope_Rep4 1074.58621599378 1074.5851099358601 49.824 2 0.05264013817887992 0.004916136495083863 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 29453 9330 FVHPGAATV True PC9_epitope_Rep1 897.4708518883699 897.46974993586 40.744 2 0.05263803334984096 0.004916136495083863 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 42017 2759 IEDSPTKRLP True H1975_Epitope_Rep2 1154.62953735774 1154.62789490379 14.64 3 0.05263313503941317 0.004916136495083863 0.9438714419765777 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000325117.8_1_X:101802327-101802774:-|nuORF'] 105113 18302 STLPDVTEV True PC9_epitope_Rep5 959.48114178855 959.4805949679301 75.413 1 0.05262071887731827 0.004916136495083863 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 119386 10952 VENSYSISV True H1975_Epitope_Rep2 996.47639076128 996.47584496793 47.158 1 0.05261434567452465 0.004937736348965484 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF', 'ENST00000488923.1_1_2:242186148-242186740:-|nuORF'] 96864 8259 SESRFFVSS True H1975_Epitope_Rep3 1044.48762415132 1044.4870749679299 36.754 1 0.052611899870048134 0.004937736348965484 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 8513 16930 ATVPGLLKV True PC9_epitope_Rep5 896.5695033004799 896.56840993586 70.137 2 0.052608047088676196 0.004937736348965484 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 81623 9079 PRQVGVVV True PC9_epitope_Rep2 852.5181364339599 852.51702993586 40.265 2 0.05260630037426313 0.004937736348965484 0.9438714419765777 ['ENST00000465651.1_1_1:205561255-205569586:+|nuORF'] 70970 5942 M[Oxidation]EQELAHAV True H1975_Epitope_Rep2 1042.4753455958999 1042.4742499358601 27.838 2 0.05259789940169012 0.004937736348965484 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000077044|Q16760-2|DGKD'] 96379 8791 SEHGLVVIA True H1975_Epitope_Rep2 923.5076313199099 923.50652993586 38.778 2 0.05258499725685276 0.004937736348965484 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 131858 20304 VYDGKFAIF True PC9_epitope_Rep3 1058.54368247546 1058.5425899358602 83.348 2 0.052571749880522205 0.004937736348965484 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'ENST00000546884.1_1_12:56474084-56480451:+|nuORF', 'nc|ENSG00000065361|P21860-3|ERBB3', 'nc|ENSG00000065361|P21860-2|ERBB3'] 135232 8748 YAYDGKDYLA True NCI_RA007_Epitope_Rep3 1177.5291546101298 1177.52804993586 41.5 2 0.05255713492209234 0.004937736348965484 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 1436 5521 AEEHLTVDA True H1975_Epitope_Rep1 983.45598966987 983.45488993586 26.299 2 0.052548284036885384 0.004937736348965484 0.9438714419765777 ['ENST00000378952.7_1_10:12209703-12222485:-|nuORF', 'ENSG00000165609|ENST00000491614|NUDT5'] 127583 14548 VQYEGNINV True PC9_epitope_Rep2 1034.50327421546 1034.5021699358601 61.231 2 0.052546996512929905 0.004937736348965484 0.9438714419765777 ['nc|ENSG00000166750|Q08AF3-2|SLFN5', 'SLFN5|p.A869Pfs*19|1|0.14|ENSG00000166750|chr17:35265814-35265814|G/-|frameshift_variant', 'ENSG00000166750|ENST00000299977|SLFN5'] 107509 8781 TAAPSPLRL True H1975_Epitope_Rep1 924.53926580136 924.53816993586 38.704 2 0.05254069536906398 0.004937736348965484 0.9438714419765777 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 132310 12553 VYLPNINKI True NCI_RA007_Epitope_Rep2 1072.62808080576 1072.6269899358601 53.442 2 0.05253015902641937 0.004937736348965484 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 14045 17479 DSDFFTSYY True H1975_Epitope_Rep3 1143.43967089939 1143.4390749679299 72.949 1 0.05252570980079442 0.004937736348965484 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 35711 5867 GTSEFLNK True NCI_RA007_Epitope_Rep2 894.4446967101799 894.44358993586 27.441 2 0.052525382603528584 0.004937736348965484 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 28868 7420 FTDSSGLIK True H1975_Epitope_Rep2 966.5022115862998 966.50110993586 33.485 2 0.05251775235415449 0.004937736348965484 0.9438714419765777 ['ENSG00000188321|ENST00000603380|ZNF559'] 9527 20995 AYAENIALL True PC9_epitope_Rep1 976.5229470308799 976.52239496793 85.583 1 0.052516825214356286 0.004937736348965484 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 110109 8985 TIAPALVSK True PC9_epitope_Rep2 898.5487678559 898.54766993586 39.915 2 0.05250324670661886 0.004937736348965484 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 1917 4761 AEINGTM[Oxidation]NA True H1975_Epitope_Rep2 935.4018463024701 935.40074993586 23.402 2 0.05249671562830335 0.004937736348965484 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 91763 9129 RPKPSSSPVIF True PC9_epitope_Rep2 1213.68190728377 1213.68080993586 40.453 2 0.0524922467441956 0.004937736348965484 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 127670 16365 VRFGPGVAF True PC9_epitope_Rep6 948.5181364339599 948.51702993586 75.333 2 0.052489205100792455 0.004937736348965484 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 137054 7314 YKYKARIFL True NCI_RA007_Epitope_Rep3 1200.7019144523597 1200.70027490379 35.887 3 0.052479007038362516 0.004937736348965484 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1'] 90837 4412 RKVKSTITL True NCI_RA007_Epitope_Rep4 1044.66552894364 1044.6644299358602 23.328 2 0.05246491286641263 0.004959911395757591 0.9438714419765777 ['ENSG00000205186|ENST00000379071|FABP9', 'ENSG00000170323|ENST00000256104|FABP4'] 1160 13563 AEASPAPLVL True H1975_Epitope_Rep2 966.5385970950199 966.5380449679301 57.307 1 0.052464226512901245 0.004959911395757591 0.9438714419765777 ['ENSG00000173621|ENST00000309602|LRFN4'] 17670 13796 EHSGPPIVI True PC9_epitope_Rep1 947.5076313199099 947.50652993586 57.911 2 0.0524322497413005 0.004959911395757591 0.9438714419765777 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 109797 4613 THITAQTAV True PC9_epitope_Rep6 940.4977949122 940.49668993586 25.046 2 0.05243098366630526 0.004959911395757591 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 2705 4149 AETKPPM[Oxidation]AP True H1975_Epitope_Rep3 956.4637182830398 956.46262993586 21.08 2 0.05242707886347493 0.004959911395757591 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 116784 15732 TYLPQSYLI True NCI_RA007_Epitope_Rep3 1096.580461907 1096.57936993586 69.52 2 0.05242004223145308 0.004959911395757591 0.9438714419765777 ['nc|ENSG00000136156|Q9Y287-2|ITM2B', 'ENSG00000136156|ENST00000647800|ITM2B'] 88247 15929 QYEQVKQLF True PC9_epitope_Rep2 1181.6080736371698 1181.6069699358602 66.52 2 0.05240331528336277 0.004959911395757591 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1', 'CNOT1-GOT2|1|fusion'] 25586 7466 FESSGIHVAA True H1975_Epitope_Rep2 1016.4927095317599 1016.49160993586 33.665 2 0.05239357841169794 0.004959911395757591 0.9438714419765777 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 26812 14731 FLEETNCLY True H1975_Epitope_Rep2 1130.4954119536999 1130.4943099358602 61.824 2 0.052389791191219476 0.004959911395757591 0.9438714419765777 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A'] 7615 8948 ASITALEAK True PC9_epitope_Rep3 902.50729696674 902.50618993586 39.367 2 0.05238168113506248 0.004959911395757591 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 44032 19746 ILLAELEQLK True PC9_epitope_Rep4 1168.7067250492798 1168.70562993586 84.077 2 0.052373006570505566 0.004959911395757591 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 97549 20524 SGVEVLVSV True PC9_epitope_Rep5 887.4963979298699 887.4958449679301 83.988 1 0.05237282121634984 0.004959911395757591 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 93770 10992 RTSTGIIGV True PC9_epitope_Rep5 902.5185303567799 902.51742993586 47.269 2 0.05236120670881509 0.004959911395757591 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 140756 18646 YYQSSVQYL True PC9_epitope_Rep3 1149.5342399905699 1149.5331499358601 76.941 2 0.05236065582340463 0.004959911395757591 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 108244 9220 TEALHFVAA True H1975_Epitope_Rep2 957.4919812557698 957.49088993586 40.418 2 0.05235876226878641 0.004959911395757591 0.9438714419765777 ['ENSG00000125817|ENST00000379751|CENPB'] 61361 10068 LLEGSGLALR True H1975_Epitope_Rep1 1027.6025943339098 1027.6014899358602 43.667 2 0.05235569027262835 0.004959911395757591 0.9438714419765777 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 70826 5324 MEERAQLEA True H1975_Epitope_Rep3 1075.4968089360298 1075.49570993586 25.551 2 0.05234965778357394 0.004978354978354979 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2'] 88441 9155 QYTQALEKF True NCI_RA007_Epitope_Rep3 1126.5658744720197 1126.56476993586 43.099 2 0.052342848933033426 0.004978354978354979 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 118840 3698 VEEKEGIPP True H1975_Epitope_Rep3 996.5127762699998 996.51166993586 19.283 2 0.052342588144218896 0.004978354978354979 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 38692 11230 HHSGNTYFL True PC9_epitope_Rep1 1074.48829285766 1074.4871899358602 48.076 2 0.052314671750144495 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 2474 8620 AEQPSELVSA True H1975_Epitope_Rep1 1029.4978544818498 1029.4967499358602 38.084 2 0.05231290511739956 0.004978354978354979 0.9438714419765777 ['ENSG00000183155|ENST00000367262|RABIF'] 138143 19186 YQLGELVKV True PC9_epitope_Rep2 1047.59644632431 1047.5953499358602 79.172 2 0.05229625031944819 0.004978354978354979 0.9438714419765777 ['ENSG00000130227|ENST00000252512|XPO7'] 138800 12172 YSDGLGGNSLY True H1975_Epitope_Rep2 1144.5036681382799 1144.50307496793 51.903 1 0.052292001877707696 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3'] 8339 6336 ATLQNVLRK True NCI_RA007_Epitope_Rep2 1041.6294777880898 1041.62838993586 29.252 2 0.05228483078726149 0.004978354978354979 0.9438714419765777 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1'] 1376 5438 AEEERYFRA True H1975_Epitope_Rep3 1169.5465360097699 1169.54488490379 25.976 3 0.05227770459363143 0.004978354978354979 0.9438714419765777 ['ENSG00000130770|ENST00000335514|ATP5IF1'] 113128 11256 TQAPGNPVL True PC9_epitope_Rep4 895.4763311916299 895.47578496793 51.069 1 0.05226284727159986 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 76477 13979 NTDFGDEFY True H1975_Epitope_Rep3 1106.4192698079798 1106.41867496793 59.089 1 0.05225910449751803 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 33400 18879 GLFIIDDK True PC9_epitope_Rep5 919.5014833103099 919.50038993586 77.637 2 0.05225309019910259 0.004978354978354979 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 65012 13133 LSDIGLEY True H1975_Epitope_Rep3 908.44911338428 908.4485649679301 55.764 1 0.05224095825340986 0.004978354978354979 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 24714 14977 FAVPENSSV True PC9_epitope_Rep5 948.4552613938799 948.45416993586 62.613 2 0.05223400453408228 0.004978354978354979 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 5198 18902 ALPPVLTTV True PC9_epitope_Rep6 909.55351888317 909.55242993586 85.353 2 0.05223066840336738 0.004978354978354979 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 1422 7483 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40140993586 33.731 2 0.05222717149016791 0.004978354978354979 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 120336 13982 VFPEKGYSF True PC9_epitope_Rep6 1072.5229470308798 1072.52184993586 65.64 2 0.05221560243097122 0.004978354978354979 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 116653 21798 TYIPGTQITF True PC9_epitope_Rep5 1139.58627556343 1139.5857749679299 88.878 1 0.052206146947844194 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 126736 20371 VPSAVLIVA True PC9_epitope_Rep1 867.5429541994699 867.5424049679301 83.182 1 0.052176382233518566 0.004978354978354979 0.9438714419765777 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000294119.6_1_11:62444064-62444232:-|nuORF'] 47309 21000 IYGEGFQTW True PC9_epitope_Rep5 1099.4974605590298 1099.49687496793 85.839 1 0.052164758620219145 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 127571 21490 VQWENSFVSV True PC9_epitope_Rep1 1193.57168812845 1193.57117496793 87.505 1 0.05216430898676529 0.004978354978354979 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 63914 20469 LPWAPAGVAA True PC9_epitope_Rep1 951.5178020807898 951.5172549679301 83.546 1 0.05215013464580846 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000166448|Q8N3G9-3|TMEM130', 'ENSG00000166448|ENST00000339375|TMEM130', 'nc|ENSG00000166448|Q8N3G9|TMEM130'] 116905 14414 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47054993586 60.712 2 0.05213373702199912 0.004978354978354979 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 45857 11378 ISQIVSSITAS True H1975_Epitope_Rep3 1104.60265390356 1104.6020749679299 48.877 1 0.05213081037112509 0.004978354978354979 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 46732 13559 IVAPGKGILAA True PC9_epitope_Rep2 1008.6331661861998 1008.63206993586 57.447 2 0.05212925233459624 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 4682 12758 ALDFIASK True PC9_epitope_Rep2 863.47526856247 863.47416993586 54.378 2 0.05212023699916562 0.004978354978354979 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 136474 11955 YHHGYSYIL True PC9_epitope_Rep2 1151.53999407735 1151.5388899358602 51.306 2 0.0521193977739696 0.004978354978354979 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 4054 7816 AHQQSIPAV True PC9_epitope_Rep1 949.4981292653698 949.49702993586 34.888 2 0.05211571960691712 0.004978354978354979 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 5669 22277 APALLLIPAA True PC9_epitope_Rep1 948.60080342876 948.59970993586 90.504 2 0.052100803610033816 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 72469 14369 M[Oxidation]VADKFTEL True PC9_epitope_Rep1 1068.51614777872 1068.5150499358601 60.095 2 0.052072466901031025 0.004978354978354979 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 72047 15655 MRAFADAL True PC9_epitope_Rep1 893.4429228883698 893.44182993586 65.037 2 0.05201631906247506 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 93772 8975 RTSTGIIGV True PC9_epitope_Rep6 902.5185303567799 902.51742993586 44.538 2 0.05201202778883381 0.004978354978354979 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 62154 8056 LLPGELAK True NCI_RA007_Epitope_Rep2 839.5116540711899 839.51054993586 35.967 2 0.052011851229162555 0.004978354978354979 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 114064 16790 TRPPALLL True PC9_epitope_Rep1 879.5541875895099 879.55308993586 69.407 2 0.052006840561090506 0.004978354978354979 0.9438714419765777 ['ENSG00000090971|ENST00000205194|NAT14'] 102340 4887 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 26.338 2 0.052003048773581376 0.004978354978354979 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 17760 5018 EHTQTVSQL True PC9_epitope_Rep4 1041.50908787189 1041.50798993586 25.925 2 0.05200217517366735 0.004978354978354979 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 17807 7190 EHYPNGVCT True PC9_epitope_Rep5 1018.41783033934 1018.41672993586 32.621 2 0.051995087266994304 0.004978354978354979 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000464669.1_1_7:116502674-116546397:+|nuORF', 'nc|ENSG00000198898|P47755-2|CAPZA2'] 105941 14553 SVLEPPLFLK True NCI_RA007_Epitope_Rep5 1141.6746966450098 1141.67358993586 62.65 2 0.051982673479278804 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 35730 2607 GTSSVIVSR True NCI_RA007_Epitope_Rep3 904.4977949122 904.49668993586 14.727 2 0.05198069739436811 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 31861 4709 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep2 977.4124109861698 977.41130993586 23.205 2 0.051977842603167894 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 116241 18143 TVVAAIQAV True PC9_epitope_Rep1 870.51746772762 870.51636993586 74.577 2 0.05197709880838833 0.004978354978354979 0.9438714419765777 ['ENSG00000170265|ENST00000610704|ZNF282', 'nc|ENSG00000170265|Q9UDV7-2|ZNF282'] 11620 10782 DHARTITVAL True PC9_epitope_Rep4 1095.60365696307 1095.60254993586 49.231 2 0.05197677048285551 0.004978354978354979 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 96381 8940 SEHGLVVIA True H1975_Epitope_Rep3 923.5076313199099 923.50652993586 39.384 2 0.051969781797942934 0.004978354978354979 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 95118 7052 RYVPRASYF True NCI_RA007_Epitope_Rep3 1157.5981776598098 1157.59654490379 34.858 3 0.0519546895861017 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 52336 17921 KPFELGNFAA True PC9_epitope_Rep4 1092.56039516876 1092.55928993586 76.982 2 0.051953553594661785 0.004978354978354979 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 1186 7942 AEDDLNTVAA True H1975_Epitope_Rep1 1017.46146897313 1017.46036993586 35.498 2 0.05194352371348132 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 40047 6070 HQVPAVSSV True PC9_epitope_Rep6 922.4872302285 922.48612993586 31.726 2 0.05194315176236613 0.004978354978354979 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 123575 9134 VIISAPSAD True H1975_Epitope_Rep3 871.46509780159 871.46454496793 40.123 1 0.05193928814033451 0.0050008414877503425 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 107207 21964 SYPDLLPTF True PC9_epitope_Rep4 1051.52261267771 1051.52207496793 92.698 1 0.051917954226859464 0.0050008414877503425 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 38191 9945 HESLFGSVA True H1975_Epitope_Rep2 945.45559574705 945.45448993586 43.242 2 0.05190157415638514 0.0050008414877503425 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16871803-16876886:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 119755 5566 VETPNSTPP True H1975_Epitope_Rep3 940.45017601344 940.44906993586 26.451 2 0.051887118258816915 0.0050008414877503425 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 95524 10250 SAQGSDVSLTA True PC9_epitope_Rep3 1034.48801807414 1034.4869299358602 44.377 2 0.05187182573526683 0.0050008414877503425 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENST00000497377.5_1_6:31322262-31322491:-|nuORF', 'ENST00000496081.5_1_6:29912792-29913229:+|nuORF', 'ENST00000481849.5_1_6:31322262-31322472:-|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H', 'ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 15096 6029 EADHLQEEY True H1975_Epitope_Rep3 1132.46728262956 1132.46618993586 28.205 2 0.05185520450096493 0.0050008414877503425 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 32065 5331 GEVTNVTTA True NCI_RA007_Epitope_Rep3 890.4345259493 890.43342993586 27.978 2 0.05185381348988165 0.0050008414877503425 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 110365 23761 TILPAIILV True PC9_epitope_Rep1 951.63685458431 951.63574993586 96.192 2 0.05185371242029089 0.0050008414877503425 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 1139 7088 AEAPPSVAP True H1975_Epitope_Rep3 837.4232329896099 837.4226849679301 32.231 1 0.05184838154832393 0.0050008414877503425 0.9438714419765777 ['nc|ENSG00000015133|Q9P219-3|CCDC88C', 'nc|ENSG00000015133|Q9P219-2|CCDC88C', 'ENSG00000015133|ENST00000389857|CCDC88C'] 92446 5229 RQVLHGEAL True NCI_RA007_Epitope_Rep4 1021.5668775315298 1021.56578993586 26.651 2 0.05183364907108743 0.0050008414877503425 0.9438714419765777 ['ENSG00000124217|ENST00000244051|MOCS3'] 116843 18560 TYMKDLYQL True PC9_epitope_Rep2 1173.5739966275698 1173.57288993586 76.743 2 0.05179248381797962 0.0050008414877503425 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 31556 10257 GEFQSFSSA True NCI_RA007_Epitope_Rep5 958.4032258210199 958.40212993586 46.083 2 0.05178834034366319 0.0050008414877503425 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 95172 18215 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41156993586 75.276 2 0.051770428663687244 0.0050008414877503425 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 132801 10748 VYSRDPNYL True PC9_epitope_Rep1 1125.5454733806098 1125.54436993586 46.23 2 0.05175413492871175 0.00502150356791043 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 23537 17242 EWSPYTKIFQF True NCI_RA007_Epitope_Rep4 1444.7027022979998 1444.70160993586 74.653 2 0.05174849188495329 0.00502150356791043 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 86241 16037 QPYMPTVSA True PC9_epitope_Rep5 992.4637179025999 992.46262993586 66.675 2 0.05173616148885829 0.00502150356791043 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 89590 3607 RESKVVVPP True NCI_RA007_Epitope_Rep5 1009.5920296502098 1009.59092993586 19.831 2 0.05173323630437398 0.00502150356791043 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 22444 7071 ETGDEPFQYKN True NCI_RA007_Epitope_Rep3 1326.5728103272597 1326.57170993586 34.931 2 0.05173313468975931 0.00502150356791043 0.9438714419765777 ['ENSG00000135821|ENST00000331872|GLUL', 'ENST00000324731.7_1_9:34917810-34918290:+|nuORF'] 107092 21554 SYMFVDENTF True PC9_epitope_Rep2 1251.5117902938298 1251.51068993586 88.377 2 0.05173017967181155 0.00502150356791043 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 94817 20270 RYLTVAAVF True PC9_epitope_Rep1 1038.5862159937797 1038.5851099358601 82.796 2 0.05172258313595375 0.00502150356791043 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 139315 13328 YTDPDQFVY True H1975_Epitope_Rep2 1146.48695544498 1146.48637496793 56.397 1 0.051718162085551724 0.00502150356791043 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6'] 116563 20968 TYFSTPLLL True PC9_epitope_Rep6 1053.57464825057 1053.57354993586 93.447 2 0.051694545040806304 0.00502150356791043 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 1442 12234 AEEIANEMIEA True H1975_Epitope_Rep2 1218.5438186981 1218.54272993586 52.14 2 0.05169125496391627 0.00502150356791043 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 48754 6380 KEQEPMPTV True H1975_Epitope_Rep2 1057.5113963710098 1057.51087496793 29.468 1 0.05166780160413584 0.00502150356791043 0.9438714419765777 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2', 'WDR18-HN1L|1|fusion'] 47518 14354 IYLPEVRKI True PC9_epitope_Rep2 1129.68593003505 1129.68427490379 60.474 3 0.051662118459440846 0.00502150356791043 0.9438714419765777 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 84274 12695 QEYFGSLAA True H1975_Epitope_Rep2 984.4552613938797 984.45416993586 53.934 2 0.051640823238788144 0.00502150356791043 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 7618 7280 ASITALEAK True PC9_epitope_Rep6 902.50729696674 902.50618993586 37.14 2 0.051640533405655234 0.00502150356791043 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 74386 16396 NITDKGIIAL True PC9_epitope_Rep6 1056.6179100448799 1056.6168099358601 75.457 2 0.05163862437876897 0.00502150356791043 0.9438714419765777 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF'] 138293 14840 YQYPVIIHL True NCI_RA007_Epitope_Rep4 1144.6280808057597 1144.6269899358601 64.545 2 0.05163830724641062 0.00502150356791043 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 89080 4216 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6032899358602 21.334 2 0.0516097448291458 0.00502150356791043 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 35014 9185 GRAPGGLSL True PC9_epitope_Rep6 826.4661008611 826.4650099358599 45.459 2 0.051602332315263906 0.00502150356791043 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 78662 18575 PEALFQPSFL True H1975_Epitope_Rep1 1147.59136094387 1147.59026993586 77.446 2 0.05159800299291454 0.00502150356791043 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 26224 14124 FHWSGNEQM True PC9_epitope_Rep3 1134.45527847722 1134.45418993586 59.414 2 0.051575702033454414 0.00502150356791043 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B'] 42578 7394 IESRTLAIA True H1975_Epitope_Rep1 972.5603951687599 972.55928993586 33.445 2 0.05155591766337335 0.00502150356791043 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 130751 16852 VVDPNDPQML True PC9_epitope_Rep1 1126.53286009158 1126.5317699358602 69.645 2 0.051546250432007855 0.00502150356791043 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 102681 3673 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 20.252 2 0.051538593325580126 0.00502150356791043 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 93811 14854 RVAPPGLTQI True PC9_epitope_Rep5 1050.61857875122 1050.61748993586 62.137 2 0.05153851624625009 0.00502150356791043 0.9438714419765777 ['nc|ENSG00000143153|P05026-2|ATP1B1', 'ENSG00000143153|ENST00000367815|ATP1B1'] 106787 20482 SYGDILHVI True PC9_epitope_Rep2 1015.53384606775 1015.53274993586 84.214 2 0.05152067741569472 0.00502150356791043 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 97064 5894 SEYLQQHVA True NCI_RA007_Epitope_Rep5 1073.51417325233 1073.5130699358601 29.358 2 0.051511763524402454 0.00502150356791043 0.9438714419765777 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 34771 22271 GQSELTLLL True PC9_epitope_Rep3 972.54916177872 972.54861496793 90.95 1 0.051510089838202225 0.00502150356791043 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 83973 4638 QELPSHGV True H1975_Epitope_Rep2 865.4293809992099 865.42828993586 22.94 2 0.051480903665669375 0.00502150356791043 0.9438714419765777 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 103159 12497 SQNKNIEVL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 53.068 2 0.05145538529275638 0.005045408678102927 0.9438714419765777 ['OR4P4|p.G14W|1|0.64|ENSG00000181927|chr11:55638397-55638397|G/T|missense_variant', 'OR4P4|p.T237Lfs*6|2|0.14|ENSG00000181927|chr11:55639064-55639064|C/-|frameshift_variant', 'ENSG00000181927|ENST00000641760|OR4P4'] 8834 16084 AVFPSIVGR True PC9_epitope_Rep2 944.5443511817999 944.54324993586 67.124 2 0.05144296166602713 0.005065053531134476 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 113807 19106 TRDVAFLL True PC9_epitope_Rep2 933.5283667644899 933.52726993586 78.862 2 0.05142851790683535 0.005065053531134476 0.9438714419765777 ['ENSG00000164291|ENST00000380009|ARSK'] 17698 17061 EHSLPTLGL True PC9_epitope_Rep4 965.51819600361 965.51708993586 73.622 2 0.05142538819166856 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000531334.1_1_1:21546450-21548377:-|nuORF'] 46889 9119 IVIETGPLK True NCI_RA007_Epitope_Rep4 968.5906326678798 968.58952993586 41.917 2 0.05141123632351286 0.005065053531134476 0.9438714419765777 ['ENSG00000151657|ENST00000379562|KIN'] 70334 17916 LYPQFMFHL True NCI_RA007_Epitope_Rep2 1194.5895871220598 1194.58848993586 74.427 2 0.051408910805371306 0.005065053531134476 0.9438714419765777 ['ENSG00000101310|ENST00000650089|SEC23B', 'nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 118091 9098 VATVSLPR True PC9_epitope_Rep2 841.5021520166499 841.50104993586 40.337 2 0.051404188497653006 0.005065053531134476 0.9438714419765777 ['CON__P00761'] 136145 14526 YGGPVGAGI True PC9_epitope_Rep1 789.4021036222099 789.4015549679301 60.699 1 0.051400577020590525 0.005065053531134476 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7'] 138872 14301 YSDPSVLYM True H1975_Epitope_Rep3 1073.47394823313 1073.4733749679299 60.353 1 0.05139723316607779 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Cfs*12|1|0.2|ENSG00000068024|chr2:239053582-239053591|CAGGCAGCGC/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000487617.5_1_2:240002789-240024568:-|nuORF'] 99035 6169 SKSSTAVYL True NCI_RA007_Epitope_Rep3 954.5022115862998 954.50110993586 31.268 2 0.05138698389010145 0.005065053531134476 0.9438714419765777 ['ENSG00000204217|ENST00000374580|BMPR2'] 107241 8685 SYPRRFSTL True PC9_epitope_Rep2 1125.59309227937 1125.59198993586 38.771 2 0.051374720214135396 0.005065053531134476 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 87817 19861 QVIPQFQTV True PC9_epitope_Rep2 1058.5760452328998 1058.57547496793 81.787 1 0.05136536693408501 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 100351 18222 SLNDCFVKV True PC9_epitope_Rep5 1023.5059170677499 1023.50480993586 75.103 2 0.05134170595980035 0.005065053531134476 0.9438714419765777 ['ENSG00000176678|ENST00000320241|FOXL1', 'ENSG00000164379|ENST00000296839|FOXQ1'] 91874 6086 RPNSGIIDA True PC9_epitope_Rep4 941.4930438849299 941.49194993586 30.417 2 0.051341221852359224 0.005065053531134476 0.9438714419765777 ['ENSG00000124164|ENST00000475243|VAPB', 'nc|ENSG00000124164|O95292-2|VAPB', 'ENST00000265619.6_1_20:56965263-57014041:+|nuORF'] 118618 3358 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 17.636 2 0.05133675913137305 0.005065053531134476 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 47716 12520 IYQDVTLKW True NCI_RA007_Epitope_Rep3 1164.6179100448799 1164.6168099358601 56.477 2 0.0513270814381113 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'BBS9|p.V734*|1|0.27|ENSG00000122507|chr7:33505546-33505546|G/-|frameshift_variant', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9', 'nc|ENSG00000122507|Q3SYG4-5|BBS9'] 47209 19658 IYAPPLPSL True PC9_epitope_Rep6 969.55351888317 969.55242993586 88.273 2 0.051323333985698875 0.005065053531134476 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1'] 16288 5493 EEILAQAK True PC9_epitope_Rep4 900.4916469026 900.49054993586 27.889 2 0.05131090025632059 0.005065053531134476 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 26044 10164 FHDLEGNAV True PC9_epitope_Rep2 1000.4614094034799 1000.46030993586 44.433 2 0.05129785319440209 0.005065053531134476 0.9438714419765777 ['ENSG00000099219|ENST00000339450|ERMP1'] 20982 17325 ERADPLFL True PC9_epitope_Rep4 959.5076313199099 959.50652993586 74.647 2 0.05129655397713345 0.005065053531134476 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 71835 21086 MPFAGLISA True PC9_epitope_Rep4 905.46807500705 905.4675249679301 89.269 1 0.0512937437697055 0.005065053531134476 0.9438714419765777 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 25270 6210 FEDNQDVSA True H1975_Epitope_Rep3 1023.4145187807098 1023.4134299358601 28.899 2 0.051279355219720636 0.005065053531134476 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 91806 6067 RPLQDPPSA True PC9_epitope_Rep5 979.5086939490699 979.50758993586 28.327 2 0.05127751555797195 0.005065053531134476 0.9438714419765777 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF', 'ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'RNF123|p.R733Pfs*7|1|0.14|ENSG00000164068|chr3:49705571-49705572|-/C|frameshift_variant', 'ENST00000486102.5_1_3:49728598-49742525:+|nuORF'] 48694 4529 KEMELPAKEA True H1975_Epitope_Rep3 1144.5798102839997 1144.5781649037901 22.542 3 0.051277311479258306 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 103570 12814 SRDEYYHLL True PC9_epitope_Rep4 1194.56693710118 1194.56530490379 57.15 3 0.05127620043906756 0.005065053531134476 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 36301 4999 GVGPVPARA True PC9_epitope_Rep4 822.47118624154 822.47008993586 25.846 2 0.05126412344705136 0.005065053531134476 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 30108 20710 FYPPKVELF True PC9_epitope_Rep1 1138.60628273202 1138.6051899358602 84.488 2 0.05126343283171544 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 30229 20219 GAAAFFTAV True PC9_epitope_Rep4 853.4334037504899 853.4328549679301 85.912 1 0.05125937055294113 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 101981 12087 SPNGQFVAP True PC9_epitope_Rep2 915.4450310633499 915.44392993586 51.801 2 0.05125433445866743 0.005065053531134476 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 84740 11842 QHGGFVVTV True PC9_epitope_Rep6 942.4923156089399 942.49120993586 56.757 2 0.051239882764026454 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 34988 10620 GRADGYVL True PC9_epitope_Rep5 849.43446637965 849.43336993586 45.837 2 0.0512267988179212 0.005065053531134476 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 54639 19260 LADPSAFVAA True PC9_epitope_Rep3 960.4916469025999 960.49054993586 79.305 2 0.05122565217014813 0.005065053531134476 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 54921 12925 LAGPVVEI True H1975_Epitope_Rep3 796.4694549060399 796.46890496793 54.944 1 0.05122287407630585 0.005065053531134476 0.9438714419765777 ['OR6N1|p.F168Ifs*13|1|0.18|ENSG00000197403|chr1:158766182-158766183|-/G|frameshift_variant', 'ENSG00000197403|ENST00000641846|OR6N1'] 98408 21601 SIIGRLLEV True PC9_epitope_Rep5 998.6124307416198 998.6118849679301 88.128 1 0.051202579620715054 0.005065053531134476 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 71079 5588 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38912993586 26.534 2 0.051193219244710104 0.005065053531134476 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 26276 18080 FIDDANYSV True PC9_epitope_Rep2 1042.4607406971402 1042.46017496793 74.846 1 0.051180652368784975 0.005065053531134476 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 8221 22602 ATIFDLSEV True PC9_epitope_Rep1 993.5018772331299 993.50078993586 91.748 2 0.05117749469567449 0.005065053531134476 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 31410 12698 GEDFAIVA True H1975_Epitope_Rep2 820.3966838885999 820.39613496793 53.943 1 0.05117047755661989 0.00508490837570757 0.9438714419765777 ['ENSG00000008018|ENST00000262193|PSMB1'] 40219 6198 HRGTGLVL True PC9_epitope_Rep4 851.49773534255 851.49662993586 30.878 2 0.05116513971260668 0.00508490837570757 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 60081 11402 LHSNGFSL True PC9_epitope_Rep4 873.4344663796501 873.43336993586 51.628 2 0.05115942988018833 0.00508490837570757 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 34985 9073 GRADGYVL True PC9_epitope_Rep4 849.43446637965 849.43336993586 42.483 2 0.05114795796600223 0.00508490837570757 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 95557 15823 SASDWYDAL True NCI_RA007_Epitope_Rep3 1026.4294405688597 1026.42834993586 69.872 2 0.05114283689651168 0.00508490837570757 0.9438714419765777 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 95702 11939 SAYEFYHAL True NCI_RA007_Epitope_Rep4 1099.49746055903 1099.49636993586 52.924 2 0.05113540162875957 0.00508490837570757 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 44830 19711 IPVYSPLSA True PC9_epitope_Rep2 945.5171333744499 945.51602993586 81.206 2 0.05111561401490173 0.00508490837570757 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 103277 16311 SQTLLSVL True NCI_RA007_Epitope_Rep4 859.50148331031 859.5009349679301 70.738 1 0.0511033819381716 0.00508490837570757 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'CEP192|p.S1464Ffs*9|1|0.11|ENSG00000101639|chr18:13059212-13059213|-/T|frameshift_variant', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF', 'ENSG00000176101|ENST00000322310|SSNA1', 'ENST00000463511.1_1_9:140083297-140084363:+|nuORF', 'ENST00000459860.1_1_9:140083297-140084363:+|nuORF'] 106202 17906 SVPLKVPGL True PC9_epitope_Rep2 908.5695033004798 908.56840993586 74.179 2 0.05110289571977012 0.00508490837570757 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 577 11135 AARLPLDAA True PC9_epitope_Rep5 896.5079656730799 896.50686993586 47.815 2 0.05109218540554278 0.00508490837570757 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 67329 21964 LTDQTLIYL True PC9_epitope_Rep1 1078.5910265906998 1078.59047496793 89.303 1 0.05108821557046002 0.00508490837570757 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 78180 6423 PAPPPPPPP True NCI_RA007_Epitope_Rep5 865.46978925921 865.46868993586 31.376 2 0.0510775167764403 0.00508490837570757 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 104792 4532 STDPSVLGK True NCI_RA007_Epitope_Rep3 902.4709114580199 902.46980993586 24.695 2 0.05106696168544826 0.00508490837570757 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 76281 10416 NSDPNLHLL True NCI_RA007_Epitope_Rep4 1021.5192586327701 1021.51816993586 46.919 2 0.05106295842044832 0.00508490837570757 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 91795 11319 RPLLKAITA True PC9_epitope_Rep3 981.63350053937 981.63240993586 48.546 2 0.05106250461963425 0.00508490837570757 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 30610 7250 GALALEEK True PC9_epitope_Rep1 829.4545331178899 829.45342993586 32.701 2 0.0510600782105686 0.00508490837570757 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 135518 10675 YEEAAMAIA True H1975_Epitope_Rep3 967.4320834211499 967.43153496793 46.134 1 0.05105967357590517 0.00508490837570757 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 23765 16728 EYIRSLNQF True PC9_epitope_Rep3 1168.58767254576 1168.58656993586 69.483 2 0.05105680570007422 0.00508490837570757 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 107892 9054 TATSEYQTF True NCI_RA007_Epitope_Rep3 1046.4556553167 1046.45454993586 42.705 2 0.05104536743926929 0.00508490837570757 0.9438714419765777 ['ENSG00000180210|ENST00000311907|F2'] 110277 16695 TIGGTLSIL True H1975_Epitope_Rep1 873.5171333744499 873.51658496793 69.614 1 0.05104030162230795 0.00508490837570757 0.9438714419765777 ['nc|ENSG00000180068|P47883|OR3A4P'] 12501 18741 DLADELALVD True H1975_Epitope_Rep3 1072.52882025696 1072.5277299358602 78.592 2 0.05103692542196312 0.00508490837570757 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENSG00000166796|ENST00000541669|LDHC', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF'] 96660 10522 SENPSVYVP True H1975_Epitope_Rep3 990.4658260775799 990.4652749679301 45.539 1 0.05102928219102618 0.00508490837570757 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 126000 10311 VPAGGAVAVSA True PC9_epitope_Rep5 897.4919812557699 897.4914349679301 44.648 1 0.051010166085285386 0.00508490837570757 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 48700 6719 KEMETPLSA True H1975_Epitope_Rep3 1004.4848472699998 1004.48374993586 30.801 2 0.05100891175898705 0.00508490837570757 0.9438714419765777 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF', 'nc|ENSG00000107262|Q99933-4|BAG1', 'nc|ENSG00000107262|Q99933-3|BAG1', 'nc|ENSG00000107262|Q99933-2|BAG1', 'ENSG00000107262|ENST00000634734|BAG1'] 93 15185 AAAPVVPAV True PC9_epitope_Rep3 793.4697892592098 793.46868993586 63.553 2 0.05099312756301115 0.00508490837570757 0.9438714419765777 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 25806 21112 FGANAILGV True PC9_epitope_Rep1 860.4756029156399 860.4745099358599 86.036 2 0.05098906218342232 0.00508490837570757 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 72493 15363 MVAPAVASV True PC9_epitope_Rep2 843.4524249429099 843.45187496793 64.375 1 0.05098453045897931 0.00508490837570757 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 139506 17418 YTIPDEYRI True PC9_epitope_Rep4 1168.57643915572 1168.57534993586 74.991 2 0.05098214702665938 0.00508490837570757 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF'] 113175 15068 TQDGNIYQL True PC9_epitope_Rep6 1050.4981888350198 1050.49708993586 70.013 2 0.05098213712032456 0.00508490837570757 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 102606 21205 SQAPFIVAL True PC9_epitope_Rep4 944.5331177917599 944.53202993586 89.729 2 0.05098107871501575 0.00508490837570757 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 20565 19348 EQDQSVLVL True PC9_epitope_Rep4 1029.5342399905699 1029.53367496793 82.532 1 0.05096974269508966 0.00508490837570757 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 106890 10582 SYIGGHEGL True PC9_epitope_Rep5 931.43994568291 931.43884993586 45.691 2 0.05094710001387969 0.00508490837570757 0.9438714419765777 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 105812 22501 SVINFLDQL True PC9_epitope_Rep4 1047.5600608155898 1047.5594749679299 94.78 1 0.050946299403688985 0.00508490837570757 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 36846 15052 GVPTKVFNV True PC9_epitope_Rep3 959.5440168286299 959.54290993586 63.027 2 0.0509443345844095 0.00508490837570757 0.9438714419765777 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3'] 92423 10758 RQSLGEPAL True PC9_epitope_Rep2 969.5243440132099 969.52324993586 46.699 2 0.05094083832863195 0.005097401043411669 0.9438714419765777 ['ENST00000556883.1_1_14:93650687-93651102:-|nuORF'] 96841 11699 SESPITVEV True H1975_Epitope_Rep1 959.48114178855 959.4805949679301 49.991 1 0.05093428223080948 0.005097401043411669 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 103853 5747 SRKESYSVY True PC9_epitope_Rep5 1117.5403880001697 1117.53928993586 27.099 2 0.05092850288390472 0.005097401043411669 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENST00000609585.1_1_1:149399050-149399179:-|nuORF', 'ENST00000412169.1_1_1:120906105-120906168:+|nuORF'] 44212 7314 ILSGVVTK True PC9_epitope_Rep2 815.51165407119 815.51054993586 33.517 2 0.05092728239310898 0.005097401043411669 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 83993 19955 QEMETVWTILP True H1975_Epitope_Rep2 1345.6587888806898 1345.6576899358602 82.74 2 0.05091653627165958 0.005097401043411669 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 74810 21459 NLPDEEIFQQL True PC9_epitope_Rep4 1344.6561460284 1344.65504993586 90.732 2 0.0509142497852025 0.005097401043411669 0.9438714419765777 ['ENSG00000169019|ENST00000381571|COMMD8'] 24144 14991 EYSRFVNQI True PC9_epitope_Rep3 1154.5720224816198 1154.57092993586 62.79 2 0.05089893811559223 0.005097401043411669 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'nc|ENSG00000132680|Q7Z7F0-3|KHDC4', 'ENST00000483237.1_1_1:155891178-155891799:-|nuORF', 'ENST00000478002.5_1_1:155885750-155895538:-|nuORF', 'nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 35303 4318 GSSEPITVK True NCI_RA007_Epitope_Rep4 916.48656152216 916.48546993586 22.953 2 0.05089451761396668 0.005097401043411669 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 88301 13524 QYKDVPITY True PC9_epitope_Rep5 1125.57062549929 1125.5695299358601 57.042 2 0.05088899351199651 0.005097401043411669 0.9438714419765777 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 41302 12639 IAHLEITAL True NCI_RA007_Epitope_Rep4 979.57023157647 979.56912993586 55.646 2 0.05088344611195953 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 29239 16499 FVDEPLIHATT True PC9_epitope_Rep3 1241.6292030045697 1241.62810993586 68.6 2 0.05086589722572991 0.005097401043411669 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 33416 9464 GLGAEVAEV True H1975_Epitope_Rep2 843.4337976733099 843.43324496793 41.371 1 0.050852556553229324 0.005097401043411669 0.9438714419765777 ['ENST00000243878.8_1_16:67700286-67700655:-|nuORF'] 47445 19748 IYILDPELL True NCI_RA007_Epitope_Rep4 1087.61651306255 1087.61540993586 85.34 2 0.05084892225183607 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 102716 11246 SQDSTAVAL True PC9_epitope_Rep2 890.4345259492999 890.43342993586 48.584 2 0.05084232980342741 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 140506 11102 YYINGKTGL True PC9_epitope_Rep4 1027.53384606775 1027.53274993586 50.48 2 0.050841873590832865 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 129152 18209 VTDDLVCLVY True H1975_Epitope_Rep2 1138.55801221026 1138.5569099358602 75.478 2 0.050841138282739534 0.005097401043411669 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 87972 12184 QVRDVIIAA True PC9_epitope_Rep5 983.5763795860698 983.57528993586 51.855 2 0.05083593349009023 0.005097401043411669 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 14799 22831 DYATIFNNL True PC9_epitope_Rep2 1069.5080252427301 1069.5069299358602 93.309 2 0.05080668927589913 0.005097401043411669 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 137982 12233 YQAEHLLQT True PC9_epitope_Rep3 1101.5454733806098 1101.54436993586 52.084 2 0.05076425280864119 0.005097401043411669 0.9438714419765777 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF'] 72897 20542 NAVVELVTV True PC9_epitope_Rep2 942.5385970950199 942.5380449679301 84.447 1 0.050758112068175265 0.005097401043411669 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 113705 10895 TRDETNYGIP True PC9_epitope_Rep2 1164.5411162761598 1164.54000993586 47.225 2 0.05074186091954063 0.005097401043411669 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 28881 16614 FTDVNKIYL True PC9_epitope_Rep4 1111.5913609438699 1111.59026993586 71.876 2 0.050729955233520536 0.005097401043411669 0.9438714419765777 ['ENSG00000101337|ENST00000398022|TM9SF4', 'TM9SF4-HM13|8|fusion', 'TM9SF4-HM13|7|fusion', 'TM9SF4-HM13|2|fusion', 'TM9SF4-HM13|9|fusion', 'TM9SF4-HM13|1|fusion', 'TM9SF4-HM13|3|fusion'] 104085 10404 SRVDGVVL True PC9_epitope_Rep4 843.48141657207 843.48030993586 47.724 2 0.050725771844611155 0.005097401043411669 0.9438714419765777 ['ENST00000496699.1_1_1:117509714-117517097:+|nuORF', 'ENSG00000134247|ENST00000393203|PTGFRN'] 131076 13359 VVLVLAGR True PC9_epitope_Rep1 825.5436229058099 825.54252993586 56.245 2 0.05070091228515739 0.005097401043411669 0.9438714419765777 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 31993 13069 GETIFVTAP True H1975_Epitope_Rep3 933.48074786573 933.4801949679301 55.512 1 0.050686762420929676 0.005097401043411669 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 54478 6771 LAAARLAAA True PC9_epitope_Rep4 826.5024863698198 826.50138993586 33.242 2 0.050684420158190545 0.005097401043411669 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 23010 14062 EVISKLYAV True PC9_epitope_Rep6 1020.5855472874398 1020.58444993586 65.962 2 0.050677979641733636 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 108972 7650 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 34.379 1 0.05067128413617385 0.005097401043411669 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 87831 22067 QVIQSLIAL True PC9_epitope_Rep5 983.6015317047498 983.60042993586 89.908 2 0.0506642248699393 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000185651|P68036-3|UBE2L3', 'nc|ENSG00000185651|P68036-2|UBE2L3', 'UBE2L3|p.Q116Sfs*10|1|0.33|ENSG00000185651|chr22:21621546-21621546|C/-|frameshift_variant', 'ENSG00000236444|ENST00000635918|UBE2L5', 'ENSG00000185651|ENST00000342192|UBE2L3', 'ENST00000496722.1_1_22:21922618-21975955:+|nuORF'] 64570 9385 LRDQGGVVL True PC9_epitope_Rep4 955.5450794577898 955.5439899358599 43.708 2 0.050626642683863736 0.005097401043411669 0.9438714419765777 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1', 'BRD1|p.R664W|1|0.6|ENSG00000100425|chr22:49797913-49797913|T/A|missense_variant'] 41074 12227 HYLDTTTLI True NCI_RA007_Epitope_Rep4 1075.55497543515 1075.5538699358601 54.026 2 0.05060276640677545 0.005097401043411669 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 96108 12074 SEDPTVPLP True H1975_Epitope_Rep3 953.4705771048499 953.47002496793 51.607 1 0.050591173379235854 0.005097401043411669 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2'] 125104 16544 VLPGVDALSNI True H1975_Epitope_Rep3 1096.61282466444 1096.61227496793 69.132 1 0.050581572535491476 0.005097401043411669 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 33205 19233 GLAAGGIVAV True PC9_epitope_Rep5 826.4912529797799 826.49070496793 79.02 1 0.050570283162323586 0.005097401043411669 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 83075 16680 PYMANVYLI True NCI_RA007_Epitope_Rep3 1082.5470536037399 1082.54594993586 73.419 2 0.05055545189221607 0.005097401043411669 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2', 'ENST00000478436.1_1_3:145795570-145803239:-|nuORF'] 76655 23083 NTIPLFVQL True PC9_epitope_Rep1 1043.60153170475 1043.60097496793 93.591 1 0.05054970751583729 0.005097401043411669 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'JUP|p.R582Q|1|0.15|ENSG00000173801|chr17:41758427-41758427|C/T|missense_variant', 'ENSG00000173801|ENST00000393931|JUP'] 96366 7838 SEGGSSFVTA True H1975_Epitope_Rep2 940.4137905047199 940.41324496793 35.099 1 0.05051804934155678 0.005097401043411669 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16', 'nc|ENSG00000039319|Q7Z3T8-3|ZFYVE16', 'ENST00000510995.1_1_5:79729945-79735859:+|nuORF'] 61205 16095 LLDPASFEY True H1975_Epitope_Rep2 1053.50187723313 1053.5007899358602 67.118 2 0.050512158481927215 0.005097401043411669 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 102483 8389 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 37.234 2 0.050509722423327276 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 74284 7479 NIILEEGK True NCI_RA007_Epitope_Rep2 914.5072969667399 914.50618993586 33.72 2 0.05049272132725088 0.005097401043411669 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF'] 7088 10030 AQYDRQIRL True PC9_epitope_Rep1 1161.6254550368099 1161.62380490379 43.448 3 0.050490708235543774 0.005097401043411669 0.9438714419765777 ['ENST00000600753.1_1_19:47634148-47653459:+|nuORF', 'nc|ENSG00000142230|Q9UBE0-2|SAE1', 'nc|ENSG00000142230|Q9UBE0-3|SAE1', 'ENSG00000142230|ENST00000270225|SAE1'] 88978 3891 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 20.01 2 0.050490102709709446 0.005097401043411669 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 127034 20948 VPYLVGQVV True PC9_epitope_Rep1 972.5644179200399 972.56386496793 85.397 1 0.050475812594401065 0.005097401043411669 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 113984 13329 TRLPALTV True PC9_epitope_Rep6 869.5334521449299 869.53234993586 62.927 2 0.050475461002625774 0.005097401043411669 0.9438714419765777 ['ENSG00000197746|ENST00000394936|PSAP', 'nc|ENSG00000197746|P07602-2|PSAP', 'nc|ENSG00000197746|P07602-3|PSAP'] 113733 20535 TRDFANFVL True PC9_epitope_Rep1 1081.55564414149 1081.5545499358602 83.801 2 0.05047428931872848 0.005097401043411669 0.9438714419765777 ['ENST00000474983.5_1_6:10529144-10530083:+|nuORF', 'GCNT2|p.K355Sfs*26|1|0.12|ENSG00000111846|chr6:10626460-10626460|A/-|frameshift_variant', 'ENSG00000111846|ENST00000495262|GCNT2'] 67457 10863 LTEEALAESA True H1975_Epitope_Rep3 1032.4975201286798 1032.4969749679299 46.866 1 0.050462687615406766 0.005097401043411669 0.9438714419765777 ['ENSG00000047662|ENST00000265018|FAM184B'] 88394 15532 QYPVIIHLI True NCI_RA007_Epitope_Rep4 1094.64881625034 1094.6477099358601 67.462 2 0.05046124446699645 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF'] 95558 15802 SASDWYDAL True NCI_RA007_Epitope_Rep4 1026.4294405688597 1026.42887496793 68.628 1 0.05046054216329234 0.005097401043411669 0.9438714419765777 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 78895 23073 PEVLLYFLG True PC9_epitope_Rep1 1049.57973363101 1049.57917496793 93.55 1 0.05044829829982158 0.005097401043411669 0.9438714419765777 ['ENST00000605778.1_1_7:35735152-35735278:+|nuORF'] 112826 8754 TPLYTDNTA True PC9_epitope_Rep6 994.46074069714 994.4596499358599 43.562 2 0.05044569693486349 0.005097401043411669 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 43245 10897 IHDFQPHVI True PC9_epitope_Rep4 1104.5716285588 1104.5705299358601 49.681 2 0.05044434433487277 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 40746 15587 HTVGELIEV True PC9_epitope_Rep4 995.5287606873098 995.52821496793 67.876 1 0.05043296899822954 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000496548.1_1_7:1855708-1869233:-|nuORF'] 455 11561 AALTSDPAV True PC9_epitope_Rep5 843.4337976733099 843.43270993586 49.465 2 0.05043161672561626 0.005097401043411669 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 58449 16250 LEWPSLTA True H1975_Epitope_Rep2 915.4701831820299 915.46963496793 67.715 1 0.05040515670083698 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 1883 2737 AEIKDGERLP True H1975_Epitope_Rep2 1126.59823722946 1126.5965849037902 14.585 3 0.05039405757655975 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 37550 17893 GYPEVALHF True PC9_epitope_Rep6 1031.5076313199097 1031.50652993586 81.45 2 0.050387393023819615 0.005097401043411669 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 108609 18271 TEINIAFLP True H1975_Epitope_Rep2 1016.5542471591599 1016.55314993586 75.752 2 0.05038339057494195 0.005097401043411669 0.9438714419765777 ['ENSG00000136854|ENST00000373299|STXBP1', 'nc|ENSG00000136854|P61764-2|STXBP1'] 89776 10419 RFEEAHFTF True NCI_RA007_Epitope_Rep5 1182.5458077337796 1182.54470993586 46.704 2 0.050379964063019415 0.005097401043411669 0.9438714419765777 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000498436.2_1_1:145578572-145580415:+|nuORF', 'ENST00000369299.7_1_1:145575401-145580415:+|nuORF'] 5038 16236 ALLGDLTKA True PC9_epitope_Rep1 900.52803241132 900.52692993586 67.269 2 0.05037668525740048 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 422 19924 AALPNVYEV True PC9_epitope_Rep5 974.5072969667399 974.5067449679301 81.692 1 0.050373983029740915 0.005097401043411669 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 95174 18396 SAAFPGASL True PC9_epitope_Rep3 819.41266830591 819.41156993586 75.967 2 0.050360675611347806 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 26383 11872 FIIPNVVK True H1975_Epitope_Rep1 928.57458868092 928.57348993586 50.664 2 0.05036045805099299 0.005097401043411669 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF'] 131762 15308 VYADQPHIF True PC9_epitope_Rep2 1088.52909504048 1088.5279899358602 64.164 2 0.05035213739548801 0.005097401043411669 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 113417 8451 TQLQTTQSV True PC9_epitope_Rep3 1004.5138388991599 1004.51274993586 37.471 2 0.05035051376139039 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.E636Q|2|0.14|ENSG00000143569|chr1:154254887-154254887|G/C|missense_variant'] 91842 7356 RPNDSRMLVA True PC9_epitope_Rep1 1157.59752603681 1157.5964299358602 33.106 2 0.05033888945725656 0.005097401043411669 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 2701 4004 AETKPPM[Oxidation]AP True H1975_Epitope_Rep2 956.4637182830398 956.46262993586 20.473 2 0.05033251022781392 0.005097401043411669 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 67249 17320 LTDLVDDNYFY True H1975_Epitope_Rep3 1376.6136125100802 1376.61250993586 72.273 2 0.05029748634862044 0.005097401043411669 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 103165 11009 SQNQVQVVL True NCI_RA007_Epitope_Rep5 1013.5505587610498 1013.54946993586 48.98 2 0.050288148632263475 0.005097401043411669 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1', 'nc|ENSG00000140688|Q96GQ5-2|RUSF1', 'ENST00000568491.1_1_16:31502158-31504599:-|nuORF'] 686 12070 AAVDATVNQVL True NCI_RA007_Epitope_Rep4 1099.58733819259 1099.58624993586 53.426 2 0.05028216486337746 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 109575 10146 THDDSHLVSL True PC9_epitope_Rep1 1122.5305515924601 1122.5294499358602 43.902 2 0.05027274016516396 0.005097401043411669 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 6858 14449 AQIEVVPSA True PC9_epitope_Rep2 912.4916469025999 912.49109496793 60.848 1 0.05026995529784166 0.005097401043411669 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 103465 5693 SRAPDGAAL True PC9_epitope_Rep5 856.4402800360799 856.43918993586 26.894 2 0.05026233311716895 0.005097401043411669 0.9438714419765777 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 76958 20161 NVPEGLLATV True PC9_epitope_Rep4 1011.56006081559 1011.5594749679301 85.687 1 0.05026206237453063 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 1515 9742 AEEPWGEEA True H1975_Epitope_Rep1 1016.4087051242799 1016.4081749679301 42.402 1 0.05024936566785838 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 32704 10633 GHSGDVMSL True PC9_epitope_Rep1 901.3963666187701 901.39526993586 45.792 2 0.0502442000903451 0.005097401043411669 0.9438714419765777 ['ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2', 'GNB2|p.A181V|1|0.43|ENSG00000172354|chr7:100678142-100678142|C/T|missense_variant', 'ENSG00000114450|ENST00000232564|GNB4'] 6528 10752 APVAEVPTA True PC9_epitope_Rep4 853.4545331178899 853.45342993586 49.115 2 0.05023471527270468 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 86051 20031 QPLPVILHV True PC9_epitope_Rep3 1014.6226015025001 1014.62150993586 82.299 2 0.05022517703724233 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ATF7IP|p.S777C|1|0.33|ENSG00000171681|chr12:14460666-14460666|C/G|missense_variant'] 16047 9337 EEALPVTTA True H1975_Epitope_Rep3 929.47057710485 929.47002496793 40.914 1 0.050210684047979015 0.005097401043411669 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 71883 7499 MPNGDHIVSA True PC9_epitope_Rep6 1039.47567956863 1039.4745899358602 38.095 2 0.05021037991001044 0.005097401043411669 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 72713 21566 MYPYIFHVL True PC9_epitope_Rep2 1181.59433814933 1181.59324993586 88.425 2 0.050202891756009886 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 93774 9129 RTSTGIIGV True PC9_epitope_Rep6 902.5185303567799 902.51742993586 45.218 2 0.050192098529337884 0.005097401043411669 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 61981 14831 LLLPGELAK True PC9_epitope_Rep6 952.5957180483199 952.59462993586 69.021 2 0.05018677110740075 0.005097401043411669 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 7194 15748 ARDETEFYL True PC9_epitope_Rep4 1142.5244035828598 1142.52387496793 68.499 1 0.050185102975246594 0.005097401043411669 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 104048 9319 SRTGEMTVL True PC9_epitope_Rep4 992.49608066004 992.49498993586 43.454 2 0.05018021475273298 0.005097401043411669 0.9438714419765777 ['ENSG00000168495|ENST00000306433|POLR3D'] 31796 11029 GEMAGAFVA True H1975_Epitope_Rep2 851.3847393059099 851.3841949679301 47.452 1 0.05016009122007313 0.005097401043411669 0.9438714419765777 ['ENST00000451221.1_1_3:172321509-172321743:-|nuORF', 'ENSG00000136868|ENST00000374212|SLC31A1'] 32991 10166 GIVEFSGK True PC9_epitope_Rep5 835.44396843419 835.44286993586 44.09 2 0.05015852436332059 0.005097401043411669 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 31909 7062 GEQSVVTAP True H1975_Epitope_Rep2 886.4396113297399 886.4390649679301 32.092 1 0.05015794039702835 0.005097401043411669 0.9438714419765777 ['ENSG00000100324|ENST00000216160|TAB1'] 15355 19098 EALFQPSFL True NCI_RA007_Epitope_Rep1 1050.53859709502 1050.53807496793 78.428 1 0.050153991144115034 0.005097401043411669 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 24320 8010 FADKHIQVL True NCI_RA007_Epitope_Rep4 1069.59202965021 1069.59092993586 37.577 2 0.050137312221343475 0.005097401043411669 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 86809 10189 QRNTFLTL True NCI_RA007_Epitope_Rep1 991.5450794577899 991.5439899358599 43.645 2 0.05011489404376019 0.005097401043411669 0.9438714419765777 ['ENST00000321037.4_1_6:46107576-46107684:+|nuORF'] 27697 7600 FQDGTKATF True PC9_epitope_Rep6 1013.4818104948899 1013.48070993586 38.517 2 0.050111145694783636 0.005097401043411669 0.9438714419765777 ['ENSG00000110711|ENST00000279146|AIP'] 103881 21725 SRLGLPLLL True PC9_epitope_Rep1 980.63825156664 980.63714993586 88.396 2 0.05010726084954322 0.005097401043411669 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 94601 18736 RYKLYQEMF True PC9_epitope_Rep3 1276.6274291827597 1276.6263299358602 77.29 2 0.05010700038821641 0.005097401043411669 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 24696 15365 FAVAPNQNL True PC9_epitope_Rep4 972.50288029264 972.50178993586 67.033 2 0.0500761426668342 0.005097401043411669 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 92146 6415 RQAPPHIEL True NCI_RA007_Epitope_Rep3 1059.58252759567 1059.5814299358601 32.244 2 0.05005121953139607 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 110326 20397 TIITTLENL True PC9_epitope_Rep6 1016.57537652656 1016.57426993586 91.156 2 0.05004903253677152 0.005117903094657292 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 119256 13867 VELDNMPLR True PC9_epitope_Rep4 1085.5539298893298 1085.55282993586 61.241 2 0.05003776498167049 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 4720 14953 ALDSTNVEL True PC9_epitope_Rep6 960.47639076128 960.47528993586 69.525 2 0.05003011186680245 0.005117903094657292 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 60615 16825 LISQIVSSITA True NCI_RA007_Epitope_Rep2 1130.6546894764201 1130.65358993586 70.18 2 0.05002966744691977 0.005117903094657292 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 39274 19395 HLPEELAEL True PC9_epitope_Rep5 1049.53932537101 1049.53822993586 79.649 2 0.049996772250432225 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 91859 8664 RPNPPPVSV True PC9_epitope_Rep3 961.53451477409 961.53340993586 38.276 2 0.04998486109467985 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 40204 6988 HRGTGIAL True PC9_epitope_Rep3 823.46643521427 823.46532993586 31.891 2 0.04998465790542568 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000143252|Q99643-5|SDHC', 'nc|ENSG00000143252|Q99643-4|SDHC', 'nc|ENSG00000143252|Q99643-3|SDHC', 'nc|ENSG00000143252|Q99643-2|SDHC', 'ENSG00000143252|ENST00000367975|SDHC'] 128892 10296 VSTEVDARL True PC9_epitope_Rep1 988.5189242795998 988.51782993586 44.489 2 0.04998008575282566 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1', 'ENST00000530119.5_1_11:747481-760254:+|nuORF', 'ENST00000533796.1_1_11:755745-760254:+|nuORF'] 131090 10957 VVLYPLVAK True NCI_RA007_Epitope_Rep3 1000.6321035570398 1000.63100993586 50.186 2 0.049952783247140975 0.005117903094657292 0.9438714419765777 ['ENSG00000110711|ENST00000279146|AIP'] 108753 8643 TENSFVVSS True H1975_Epitope_Rep3 968.445090633 968.44454496793 38.241 1 0.04994320736097815 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 49357 16215 KIFSGVFVKV True PC9_epitope_Rep4 1122.68011637862 1122.67846490379 70.314 3 0.049925455417487066 0.005117903094657292 0.9438714419765777 ['ENST00000530523.1_1_8:42580956-42581139:-|nuORF', 'nc|ENSG00000146223|Q6DKI1-2|RPL7L1', 'ENST00000397415.7_1_6:42848808-42854199:+|nuORF', 'ENSG00000146223|ENST00000493763|RPL7L1', 'ENST00000462348.1_1_6:42848614-42854030:+|nuORF'] 2603 9581 AESLPGVEA True H1975_Epitope_Rep2 871.4287122928699 871.42816496793 41.829 1 0.049902908725528196 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C'] 31916 12812 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.49187496793 54.345 1 0.0498943744824178 0.005117903094657292 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 117438 13354 VADRLLVEL True NCI_RA007_Epitope_Rep4 1026.6073453611798 1026.6062499358602 58.519 2 0.04988411387825639 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B'] 138543 13661 YRMDGHIQL True PC9_epitope_Rep1 1131.5495132152298 1131.54787490379 57.402 3 0.04988268974496092 0.005117903094657292 0.9438714419765777 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 6625 16873 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 77.419 2 0.049866069840426325 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 108363 5454 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 26.035 2 0.04985189921762499 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 2627 7616 AESPGVPVA True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 34.248 1 0.04983391628094004 0.005117903094657292 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 60403 8129 LIIYSRNQ True H1975_Epitope_Rep2 1005.5607295219299 1005.55962993586 36.218 2 0.04980945163013556 0.005117903094657292 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.T725S|2|0.23|ENSG00000181544|chrX:14843974-14843974|T/A|missense_variant'] 106514 19371 SVVPYLPRL True PC9_epitope_Rep4 1042.61751612206 1042.61640993586 82.623 2 0.04980247550770425 0.005117903094657292 0.9438714419765777 ['ABL2|p.P984Hfs*6|1|0.15|ENSG00000143322|chr1:179108316-179108316|G/-|frameshift_variant', 'nc|ENSG00000143322|P42684-4|ABL2', 'nc|ENSG00000143322|P42684-7|ABL2', 'nc|ENSG00000143322|P42684-10|ABL2', 'nc|ENSG00000143322|P42684-5|ABL2', 'nc|ENSG00000143322|P42684-2|ABL2', 'nc|ENSG00000143322|P42684-6|ABL2', 'nc|ENSG00000143322|P42684-3|ABL2', 'ENSG00000143322|ENST00000502732|ABL2', 'ABL2|p.S721Efs*9|1|0.38|ENSG00000143322|chr1:179109106-179109107|-/C|frameshift_variant'] 64026 11852 LQDEANYHL True PC9_epitope_Rep5 1101.50908787189 1101.50798993586 50.587 2 0.049794327742887216 0.005117903094657292 0.9438714419765777 ['ENSG00000137275|ENST00000259808|RIPK1', 'nc|ENSG00000137275|Q13546-2|RIPK1'] 108975 7936 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46963496793 35.474 1 0.049759495611112564 0.005117903094657292 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 8697 9974 AVDEDRKMYL True PC9_epitope_Rep1 1238.5965229772999 1238.59486490379 43.23 3 0.049739111039809304 0.005117903094657292 0.9438714419765777 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 103421 23239 SQYPEIIFL True PC9_epitope_Rep1 1108.580461907 1108.57936993586 94.179 2 0.04973853252260387 0.005117903094657292 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-3|ELAC2'] 54914 8700 LAGPLRPAA True PC9_epitope_Rep1 864.5181364339599 864.51702993586 38.304 2 0.04973148574180531 0.005117903094657292 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 87814 10659 QVIKEINQV True PC9_epitope_Rep5 1069.6131590176099 1069.61206993586 45.988 2 0.04972733670252366 0.005117903094657292 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19'] 136748 17499 YIPGRQIIEV True PC9_epitope_Rep5 1186.6710082468999 1186.66990993586 72.313 2 0.04972660564966094 0.005117903094657292 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 21657 12283 ERTSFNYAM True PC9_epitope_Rep2 1117.4862442523297 1117.4851499358601 52.557 2 0.049707244035829816 0.00513800932010993 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 24305 15197 FADEGSIFY True H1975_Epitope_Rep1 1047.45492704071 1047.4543749679299 63.718 1 0.049697209237413394 0.00513800932010993 0.9438714419765777 ['nc|ENSG00000107745|Q9BPX6-2|MICU1', 'ENSG00000107745|ENST00000361114|MICU1', 'nc|ENSG00000107745|Q9BPX6-3|MICU1', 'nc|ENSG00000107745|Q9BPX6-6|MICU1'] 104207 5809 SSDKGRLCYY True H1975_Epitope_Rep3 1190.53900810118 1190.53735490379 27.367 3 0.0496893783612664 0.00513800932010993 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 25210 9025 FEADPPGQVAA True H1975_Epitope_Rep3 1100.51383889916 1100.51274993586 39.709 2 0.04968694630185185 0.00513800932010993 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 1126 7594 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 34.162 1 0.04967695092387384 0.00513800932010993 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 92225 12041 RQIIAVVL True NCI_RA007_Epitope_Rep5 910.5963867546599 910.59528993586 52.975 2 0.04967690343101184 0.00513800932010993 0.9438714419765777 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 26742 14950 FLDGNEMTL True NCI_RA007_Epitope_Rep4 1038.46919720586 1038.46867496793 64.97 1 0.049663501752591446 0.00513800932010993 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 86652 14909 QRGPPIIL True PC9_epitope_Rep1 892.5494365622399 892.54832993586 62.169 2 0.049627370611393655 0.00513800932010993 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 123131 5812 VHDGDTVSV True PC9_epitope_Rep1 927.42977492203 927.42866993586 27.171 2 0.04961513663281033 0.00513800932010993 0.9438714419765777 ['ENSG00000186111|ENST00000335312|PIP5K1C', 'nc|ENSG00000186111|O60331-4|PIP5K1C', 'nc|ENSG00000186111|O60331-3|PIP5K1C', 'ENST00000486866.1_1_1:151209168-151212598:+|nuORF', 'nc|ENSG00000186111|O60331-2|PIP5K1C'] 43531 13483 IIDNSQGF True PC9_epitope_Rep1 892.4290466460399 892.4279499358599 56.719 2 0.049610918964991424 0.00513800932010993 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 53564 18791 KVTDDLVCL True PC9_epitope_Rep5 1004.5212327787199 1004.52012993586 77.293 2 0.049600405947633514 0.00513800932010993 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 30904 8189 GASAEELLAQ True H1975_Epitope_Rep2 987.4872897981497 987.48674496793 36.451 1 0.049585825364320296 0.00513800932010993 0.9438714419765777 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47655184-47666418:-|nuORF'] 35309 4613 GSSSVILEK True NCI_RA007_Epitope_Rep3 918.5022115863 918.50110993586 25.06 2 0.04958226961667447 0.00513800932010993 0.9438714419765777 ['ENSG00000177409|ENST00000318238|SAMD9L'] 125698 8195 VNDGDMRLAD True PC9_epitope_Rep4 1104.48697252832 1104.4858699358601 38.981 2 0.049579854628411836 0.00513800932010993 0.9438714419765777 ['ENSG00000108679|ENST00000262776|LGALS3BP'] 76288 12063 NSDPYSVAL True NCI_RA007_Epitope_Rep4 964.4501760134399 964.44962496793 53.4 1 0.04957690148059574 0.00513800932010993 0.9438714419765777 ['ENSG00000165168|ENST00000378588|CYBB', 'CYBB|p.K331Rfs*12|1|0.56|ENSG00000165168|chrX:37803969-37803969|A/-|frameshift_variant', 'CYBB|p.W206Gfs*8|2|0.14|ENSG00000165168|chrX:37796079-37796079|C/-|frameshift_variant', 'CYBB|p.W289Gfs*24|2|0.12|ENSG00000165168|chrX:37801313-37801313|T/-|frameshift_variant'] 4620 17076 ALAPGLPTA True PC9_epitope_Rep1 809.46470387877 809.46360993586 70.509 2 0.04957489323691505 0.00513800932010993 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 138035 4720 YQDPHSTAV True PC9_epitope_Rep2 1016.45632402304 1016.45522993586 23.525 2 0.049567437196640377 0.00513800932010993 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 9892 8510 AYNPNTQTF True NCI_RA007_Epitope_Rep3 1054.4719740871801 1054.47086993586 40.548 2 0.049556351802682815 0.00513800932010993 0.9438714419765777 ['ENSG00000174405|ENST00000442234|LIG4', 'LIG4|p.G346Efs*10|1|0.4|ENSG00000174405|chr13:108210232-108210232|C/-|frameshift_variant'] 29266 17138 FVDGSAIQV True PC9_epitope_Rep4 934.47599683846 934.47488993586 73.927 2 0.04955271210978492 0.00513800932010993 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 39757 12220 HPYLPINSA True PC9_epitope_Rep2 1010.51853035678 1010.51742993586 52.317 2 0.04954808995129483 0.00513800932010993 0.9438714419765777 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 6233 2547 APRGPGTVPA True PC9_epitope_Rep4 921.5032146458099 921.50210993586 14.717 2 0.04952742400884737 0.00513800932010993 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 22800 19686 EVDPSDWIGLY True H1975_Epitope_Rep2 1292.5924831426798 1292.5913899358602 81.684 2 0.04952304036803859 0.00513800932010993 0.9438714419765777 ['ENSG00000138411|ENST00000644978|HECW2'] 102123 7938 SPQQPGLSA True PC9_epitope_Rep5 883.4399456829099 883.4393949679301 35.473 1 0.04951645814863924 0.00513800932010993 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 14027 4837 DSAPSPPPP True H1975_Epitope_Rep2 863.40249754503 863.40140993586 23.695 2 0.049512048697445736 0.00513800932010993 0.9438714419765777 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 48370 8300 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54861496793 36.91 1 0.04950314947228283 0.00513800932010993 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 137464 21010 YLPDSLTQL True PC9_epitope_Rep2 1048.54407639828 1048.54357496793 86.269 1 0.04950259102912042 0.00513800932010993 0.9438714419765777 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 104613 14018 SSVATVVYL True H1975_Epitope_Rep2 937.5120479940099 937.51149496793 59.07 1 0.04950143248606093 0.00513800932010993 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 5021 21365 ALLELLHEL True PC9_epitope_Rep4 1049.61209638845 1049.61098993586 90.347 2 0.04949584421469488 0.00513800932010993 0.9438714419765777 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF', 'ENSG00000161904|ENST00000293760|LEMD2'] 101723 21974 SPGTALILLEA True PC9_epitope_Rep2 1083.61757569171 1083.61707496793 89.999 1 0.049489518617738294 0.00513800932010993 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 101675 6756 SPFSTGRSC True PC9_epitope_Rep5 940.40726565564 940.40616993586 30.958 2 0.049479012986950205 0.00513800932010993 0.9438714419765777 ['ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B'] 63240 11640 LPAEAVEAA True PC9_epitope_Rep1 869.4494477374499 869.44834993586 49.652 2 0.04947856116694657 0.00513800932010993 0.9438714419765777 ['ENSG00000130706|ENST00000253003|ADRM1'] 118086 6935 VATVSLPR True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 33.36 2 0.049471566896470226 0.005149969004816175 0.9438714419765777 ['CON__P00761'] 9909 11567 AYPHNLMTF True NCI_RA007_Epitope_Rep3 1092.50625142092 1092.5051499358601 52.628 2 0.04946578053947449 0.005149969004816175 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 117409 6558 VADKVHLM[Oxidation]Y True H1975_Epitope_Rep1 1090.54811661334 1090.5470099358602 30.283 2 0.04946560420054105 0.005149969004816175 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 24423 4147 FAGDDAPR True NCI_RA007_Epitope_Rep2 847.38243080679 847.38132993586 20.77 2 0.04946336543795456 0.005149969004816175 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 97547 19542 SGVEVLVSV True PC9_epitope_Rep4 887.4963979298699 887.4958449679301 83.291 1 0.04945555553943836 0.005149969004816175 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 131777 22526 VYAFSIENF True PC9_epitope_Rep1 1088.5178616504397 1088.51676993586 91.448 2 0.04945462394755529 0.005149969004816175 0.9438714419765777 ['ENST00000528557.5_1_1:26759436-26769365:+|nuORF', 'nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS'] 56877 12215 LEDLPTVEA True H1975_Epitope_Rep2 985.49679185269 985.49568993586 52.067 2 0.04945427560602664 0.005149969004816175 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 77095 14094 NYAAALETF True NCI_RA007_Epitope_Rep3 998.47091145802 998.46980993586 62.733 2 0.04944821345878209 0.005149969004816175 0.9438714419765777 ['ENST00000379514.2_1_9:33503785-33510678:-|nuORF', 'ENSG00000165416|ENST00000310528|SUGT1', 'nc|ENSG00000165416|Q9Y2Z0|SUGT1'] 33900 19583 GLYEGLTWL True H1975_Epitope_Rep3 1050.53859709502 1050.53807496793 82.051 1 0.04944737973749211 0.005149969004816175 0.9438714419765777 ['ENSG00000165527|ENST00000298316|ARF6'] 21012 7231 ERAQGVVL True PC9_epitope_Rep2 870.4923156089399 870.49120993586 33.203 2 0.04944202748857048 0.005149969004816175 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 18428 14786 EKFQHYPHIKR True PC9_epitope_Rep6 1481.78916631697 1481.7875249037902 68.84 3 0.0494325890268288 0.005149969004816175 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13'] 70898 13972 MEIPTTIQC True H1975_Epitope_Rep1 1034.47765371458 1034.47654993586 58.901 2 0.049428965196710674 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 78174 6280 PAPPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 30.759 2 0.049425586269700825 0.005149969004816175 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 132954 21035 VYTWPSGNTF True PC9_epitope_Rep5 1170.53457434374 1170.53346993586 85.97 2 0.04941366556625879 0.005149969004816175 0.9438714419765777 ['ENSG00000149596|ENST00000372980|JPH2', 'nc|ENSG00000149596|Q9BR39-2|JPH2'] 135895 9237 YESSTASALVA True H1975_Epitope_Rep3 1097.52406922969 1097.52347496793 40.521 1 0.04941235167221112 0.005149969004816175 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 76278 10713 NSDPGLAVGY True H1975_Epitope_Rep3 991.46107505031 991.46052496793 46.284 1 0.04940469188188386 0.005149969004816175 0.9438714419765777 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 137497 20251 YLPPGFLSA True PC9_epitope_Rep4 963.50656869075 963.50546993586 86.037 2 0.049388740645282994 0.005149969004816175 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 7023 15303 AQSELETAL True PC9_epitope_Rep2 960.47639076128 960.47528993586 64.145 2 0.04937951749050157 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 10866 11448 DALNIETAIK True NCI_RA007_Epitope_Rep2 1086.5920892198599 1086.59157496793 49.121 1 0.04934740004485485 0.005149969004816175 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion'] 48785 8433 KEQLPPLAAA True H1975_Epitope_Rep3 1036.5916952970397 1036.5911749679299 37.421 1 0.049332041278479136 0.005149969004816175 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 119669 12944 VESPVWVSA True H1975_Epitope_Rep2 972.4916469025999 972.49109496793 54.903 1 0.04932668840551248 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC', 'nc|ENSG00000054983|P54803-4|GALC', 'ENST00000557520.1_1_14:88425979-88431954:-|nuORF', 'nc|ENSG00000054983|P54803-5|GALC'] 123695 9057 VIPELNGK True PC9_epitope_Rep1 868.50181766348 868.50072993586 39.688 2 0.049320187788494944 0.005149969004816175 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 76844 8267 NVHAVFQEA True PC9_epitope_Rep6 1013.4930438849299 1013.49194993586 41.402 2 0.04930301752317534 0.005149969004816175 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 56922 6577 LEDRPSNLP True H1975_Epitope_Rep1 1039.52982331647 1039.5287299358602 30.357 2 0.049295001471388954 0.005149969004816175 0.9438714419765777 ['ENSG00000108239|ENST00000225235|TBC1D12'] 98002 11892 SHSPPLLQV True PC9_epitope_Rep6 976.53418042092 976.53308993586 56.974 2 0.04929122907863044 0.005149969004816175 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 116511 11966 TYDYNFHSF True NCI_RA007_Epitope_Rep5 1192.48253877088 1192.4814499358602 52.684 2 0.04927976565036587 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 72676 23776 MYIDPDLLAEL True PC9_epitope_Rep2 1291.6369908069498 1291.6358899358602 96.926 2 0.04925662164267488 0.005149969004816175 0.9438714419765777 ['ENSG00000104611|ENST00000265807|SH2D4A'] 125004 7666 VLNTNIDGR True PC9_epitope_Rep5 1000.53015766964 1000.52906993586 34.431 2 0.04924120080608189 0.005149969004816175 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 90742 9814 RKQMVIDVL True NCI_RA007_Epitope_Rep4 1100.6375999436398 1100.6365099358602 44.598 2 0.049237511715977886 0.005149969004816175 0.9438714419765777 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 113654 5852 TRDEDHIAL True PC9_epitope_Rep6 1068.51998690876 1068.5188899358602 30.735 2 0.04923704504639955 0.005149969004816175 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 29891 19829 FVYPLDFART True PC9_epitope_Rep4 1227.6288090817498 1227.6277099358601 84.4 2 0.0492349412861952 0.005149969004816175 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant', 'SLC25A5|p.R140H|1|0.11|ENSG00000005022|chrX:119469968-119469968|G/A|missense_variant', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 31478 12506 GEELSPPLP True H1975_Epitope_Rep1 937.4756624852898 937.47511496793 53.145 1 0.04922235901846393 0.005149969004816175 0.9438714419765777 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 102141 5568 SPREVTVQA True PC9_epitope_Rep5 985.51925863277 985.51816993586 26.421 2 0.049217739303695135 0.005149969004816175 0.9438714419765777 ['ENSG00000160111|ENST00000443236|CPAMD8', 'nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'CPAMD8|p.V1154Sfs*25|1|0.33|ENSG00000160111|chr19:16928060-16928060|C/-|frameshift_variant'] 136365 9688 YHDHTKIII True PC9_epitope_Rep1 1138.61349337078 1138.6118549037901 42.121 3 0.04917834251153973 0.005149969004816175 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 7116 5189 AQYEEIANR True H1975_Epitope_Rep3 1092.5199869087598 1092.5188899358602 25.055 2 0.049176969144119564 0.005149969004816175 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF'] 103553 9982 SRDDTTLNAL True PC9_epitope_Rep4 1104.54111627616 1104.54000993586 46.056 2 0.049164235249456824 0.005149969004816175 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF'] 97815 13972 SHIGDAVVI True PC9_epitope_Rep3 909.49198125577 909.49088993586 58.817 2 0.04915591520914456 0.005149969004816175 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 54420 14576 KYSNMEQSLF True PC9_epitope_Rep6 1245.5699738762899 1245.5688699358602 67.963 2 0.0491514977842022 0.005149969004816175 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 109571 6140 THAVVGVAT True PC9_epitope_Rep1 853.4657665079299 853.46466993586 28.432 2 0.04914145973844711 0.005149969004816175 0.9438714419765777 ['ENSG00000111671|ENST00000524270|SPSB2', 'nc|ENSG00000111671|Q99619-2|SPSB2', 'ENSG00000175093|ENST00000310546|SPSB4', 'ENSG00000171621|ENST00000328089|SPSB1'] 52507 10480 KPNPNQIISV True PC9_epitope_Rep6 1108.62405805448 1108.62296993586 51.072 2 0.049130903641971084 0.005149969004816175 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 19965 14974 EMDSPILGDY True H1975_Epitope_Rep2 1138.4852411928198 1138.48467496793 62.749 1 0.049126848057195166 0.005149969004816175 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 6355 5173 APRQPGLM[Oxidation]A True PC9_epitope_Rep6 955.4909360903898 955.48982993586 27.637 2 0.04910236578305956 0.005149969004816175 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 40977 16253 HYAALAHYF True PC9_epitope_Rep5 1091.51886470995 1091.51776993586 67.507 2 0.04908759979491589 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'ENST00000566346.2_1_16:33401403-33412789:+|nuORF'] 129414 5929 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.5229699358601 27.815 2 0.04908256970294258 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 6261 4422 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 23.462 2 0.049076468837728725 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ENSG00000184939|ENST00000563169|ZFP90'] 88259 16289 QYESKVFYL True PC9_epitope_Rep6 1175.5862755634298 1175.5851699358602 75.016 2 0.04907368042948948 0.005149969004816175 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 100488 12687 SLPKGVVEV True PC9_epitope_Rep5 926.54368247546 926.54258993586 53.806 2 0.04905317309771814 0.005149969004816175 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 98042 13983 [Acetylation]-SHTILLVQPTK True PC9_epitope_Rep4 1277.7343370957499 1277.7332299358602 61.691 2 0.049051572487020356 0.005149969004816175 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH'] 6131 7973 APNLQNQQV True PC9_epitope_Rep6 1010.5145076055 1010.51340993586 40.128 2 0.049042653587248713 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 70290 14957 LYPEGLAQL True NCI_RA007_Epitope_Rep4 1002.5385970950199 1002.53750993586 64.996 2 0.049036083756026035 0.005149969004816175 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000563305.1_1_16:67472744-67473248:-|nuORF'] 104053 6878 SRTPGQVL True PC9_epitope_Rep5 856.4766655447999 856.47556993586 31.426 2 0.04901316247718536 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.P626Lfs*11|1|0.21|ENSG00000120539|chr10:27170834-27170834|C/-|frameshift_variant'] 102490 7043 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 34.347 2 0.048999916327883315 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 25925 10743 FGPALSVK True PC9_epitope_Rep4 817.46978925921 817.46868993586 49.079 2 0.04898507145221815 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 46762 14301 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.45752993586 59.834 2 0.04896831117471628 0.005149969004816175 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 95205 12590 SAAMPGASL True PC9_epitope_Rep4 803.38473930591 803.38364993586 56.257 2 0.048965233382567606 0.005149969004816175 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 1127 7696 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 34.557 1 0.048946738379342276 0.005149969004816175 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 76959 21029 NVPEGLLATV True PC9_epitope_Rep5 1011.56006081559 1011.5594749679301 85.945 1 0.048939517290351585 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 24307 15175 FADEGSIFY True H1975_Epitope_Rep3 1047.45492704071 1047.4543749679299 63.774 1 0.04893765917872978 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000107745|Q9BPX6-2|MICU1', 'ENSG00000107745|ENST00000361114|MICU1', 'nc|ENSG00000107745|Q9BPX6-3|MICU1', 'nc|ENSG00000107745|Q9BPX6-6|MICU1'] 35526 15455 GTIDEIQKL True PC9_epitope_Rep3 1015.5549754351499 1015.55386993586 64.6 2 0.04893416566151631 0.005149969004816175 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1'] 88442 9429 QYTQALEKF True NCI_RA007_Epitope_Rep4 1126.5658744720197 1126.56476993586 43.127 2 0.0489174003840425 0.005149969004816175 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 41484 4161 IC[Carbamidomethyl]DNQDTISSK True NCI_RA007_Epitope_Rep2 1279.5714307076998 1279.5703299358602 20.825 2 0.04891174645795667 0.005149969004816175 0.9438714419765777 ['CON__P02769'] 27246 18704 FLVQNIHTL True PC9_epitope_Rep1 1083.60767971435 1083.60658993586 76.734 2 0.04891023896475362 0.005149969004816175 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF'] 55483 11931 LAVHPSGVAL True PC9_epitope_Rep6 962.5549158654999 962.55380993586 57.136 2 0.04889512234546716 0.005149969004816175 0.9438714419765777 ['ENSG00000187608|ENST00000649529|ISG15'] 86583 8154 QRDEKVLEL True PC9_epitope_Rep6 1128.6138872935999 1128.61225490379 40.909 3 0.048894780491619924 0.005149969004816175 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 106689 16027 SYANVQDGF True PC9_epitope_Rep3 999.4297749220299 999.42866993586 66.797 2 0.04888979285040424 0.005149969004816175 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 107758 15667 TAMDVVYAL True NCI_RA007_Epitope_Rep3 981.4841189940099 981.48357496793 69.246 1 0.048883142670850845 0.005149969004816175 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 40981 15996 HYALNTWLF True NCI_RA007_Epitope_Rep3 1163.57637958607 1163.5752899358602 70.594 2 0.04888216470628263 0.005149969004816175 0.9438714419765777 ['ENSG00000170881|ENST00000303545|RNF139'] 89662 8759 REVDPLRIPP True H1975_Epitope_Rep3 1190.6771562565 1190.6760499358602 38.697 2 0.04888033194683055 0.005149969004816175 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 25386 20250 FEILPGLSV True H1975_Epitope_Rep1 973.54843350273 973.54788496793 84.239 1 0.04886338387471644 0.005149969004816175 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 78208 7590 PAPPPPPPP True PC9_epitope_Rep6 865.46978925921 865.46868993586 38.473 2 0.04886227405520227 0.005149969004816175 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 132435 22891 VYNPVIYVF True PC9_epitope_Rep3 1112.5906326678798 1112.5895299358601 93.316 2 0.04886009853164636 0.005149969004816175 0.9438714419765777 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 2103 5012 AELPGRTP True H1975_Epitope_Rep2 839.4501164437901 839.44900993586 24.361 2 0.04884631521788395 0.005149969004816175 0.9438714419765777 ['ENSG00000163623|ENST00000295886|NKX6-1'] 134884 14715 YADGESFLGY True H1975_Epitope_Rep1 1120.4713053808398 1120.47020993586 61.819 2 0.048844052452622425 0.005149969004816175 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 35794 7498 GTWNGTTKV True PC9_epitope_Rep3 962.48214484806 962.48104993586 33.844 2 0.04883330038815773 0.005149969004816175 0.9438714419765777 ['ENSG00000176105|ENST00000314574|YES1'] 5129 19095 ALMPVLNQV True PC9_epitope_Rep6 983.54738795691 983.54628993586 86.097 2 0.048824563146528596 0.005149969004816175 0.9438714419765777 ['ENSG00000223496|ENST00000435634|EXOSC6'] 131520 19988 VVVGDLVEV True PC9_epitope_Rep4 927.5276980581499 927.5271449679301 85.017 1 0.04882436647479231 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 32695 9584 GHSEAVISV True PC9_epitope_Rep1 897.45559574705 897.45448993586 41.721 2 0.04880667153328444 0.005149969004816175 0.9438714419765777 ['ENSG00000073536|ENST00000442241|NLE1', 'ENST00000593176.1_1_17:33464206-33469153:-|nuORF'] 5903 10502 APGYSYTAA True PC9_epitope_Rep5 899.4024975450299 899.40194496793 45.382 1 0.048801081736836345 0.005149969004816175 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS'] 59967 17270 LHNDGIYIM True PC9_epitope_Rep5 1074.51681610462 1074.51570993586 71.439 2 0.04877650048342286 0.005149969004816175 0.9438714419765777 ['ENSG00000087448|ENST00000381271|KLHL42'] 108222 6879 TEAEIAHIA True H1975_Epitope_Rep2 953.4818104948898 953.48070993586 31.38 2 0.04876475271038045 0.005149969004816175 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1'] 102498 6528 SPYIPPHAA True PC9_epitope_Rep6 951.48141657207 951.48030993586 33.782 2 0.04875592320855155 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 2809 5728 AEVEPTPEA True NCI_RA007_Epitope_Rep3 941.4341915961298 941.43308993586 29.508 2 0.04873474158694054 0.005149969004816175 0.9438714419765777 ['ENSG00000186834|ENST00000332499|HEXIM1'] 732 15899 AAVPGKTFVNI True PC9_epitope_Rep5 1115.63389446219 1115.63278993586 66.146 2 0.04872934763795897 0.005149969004816175 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 113990 18039 TRLPEFSEL True PC9_epitope_Rep4 1090.56587447202 1090.56537496793 77.453 1 0.04872174672788093 0.005149969004816175 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 31768 10834 GELLFVHSA True H1975_Epitope_Rep3 971.50763131991 971.50708496793 46.752 1 0.048721643419968964 0.005149969004816175 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 113360 5632 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.5496749679301 28.351 1 0.048709559651017205 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 137479 20493 YLPESSFIGA True PC9_epitope_Rep3 1082.52842633414 1082.52732993586 84.084 2 0.04870911617962824 0.005149969004816175 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD', 'FOCAD|p.A1367S|1|0.67|ENSG00000188352|chr9:20953032-20953032|G/T|missense_variant'] 120588 11911 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.4641549679301 50.895 1 0.04869246721696863 0.005149969004816175 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 72459 23265 MTVDDLLSL True PC9_epitope_Rep2 1005.5052483614099 1005.50414993586 94.972 2 0.04868091810627789 0.005149969004816175 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 133339 9397 WEVDVTGKEA True NCI_RA007_Epitope_Rep5 1132.540053647 1132.53894993586 42.786 2 0.048671944729881955 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000132109|P19474-2|TRIM21', 'ENSG00000132109|ENST00000254436|TRIM21'] 95161 11694 SAAFPGASL True NCI_RA007_Epitope_Rep3 819.41266830591 819.41156993586 53.114 2 0.048664450359089534 0.005149969004816175 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 31803 12256 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43606993586 52.225 2 0.0486447971953076 0.005149969004816175 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 132261 10867 VYLAAVNRL True NCI_RA007_Epitope_Rep4 1017.5971150306499 1017.59600993586 48.65 2 0.04863392228386119 0.005149969004816175 0.9438714419765777 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 118345 8215 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep1 964.4688036634799 964.46770993586 35.953 2 0.048630465330597304 0.005149969004816175 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 96878 8214 SESVTEITA True H1975_Epitope_Rep2 935.44475627983 935.4442049679301 36.548 1 0.04860700554337063 0.005149969004816175 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 52604 13698 KQADPFASL True PC9_epitope_Rep6 975.5025459394699 975.50144993586 64.476 2 0.04860392252230914 0.005149969004816175 0.9438714419765777 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 132004 20485 VYGPLPQSF True PC9_epitope_Rep3 1006.5123823471798 1006.51187496793 84.054 1 0.04860096901640617 0.005149969004816175 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 70797 10338 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 44.773 2 0.048593848487432256 0.0051734414113720345 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 70559 17755 LYVVPFVA True H1975_Epitope_Rep2 906.5214904788999 906.5209449679301 73.615 1 0.0485915204697 0.0051734414113720345 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 88986 3085 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 16.36 2 0.04857978741010421 0.0051734414113720345 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 103713 10774 SREEQAVLL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 49.202 2 0.0485628342528741 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1'] 20755 20595 EQLGTFTTL True PC9_epitope_Rep5 1008.51277627 1008.51166993586 84.265 2 0.048560450681751695 0.0051908469652594234 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF'] 115205 7730 TVAVGVIK True PC9_epitope_Rep2 785.50108938749 785.49998993586 35.108 2 0.04855539790649015 0.0051908469652594234 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 46493 19078 ITPENLPQI True PC9_epitope_Rep4 1023.5600608155898 1023.5589699358601 81.474 2 0.04852510325674161 0.0051908469652594234 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 93767 11286 RTSTGIIGV True PC9_epitope_Rep3 902.5185303567799 902.51742993586 48.418 2 0.048522537642912394 0.0051908469652594234 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 886 5967 ADLSGITK True NCI_RA007_Epitope_Rep1 803.43888305375 803.43778993586 27.258 2 0.04852200000945974 0.0051908469652594234 0.9438714419765777 ['CON__P34955', 'ENSG00000100665|ENST00000557004|SERPINA4'] 135061 20700 YALDLSTFL True H1975_Epitope_Rep2 1041.53826274185 1041.5371699358602 85.729 2 0.048521483414012724 0.0051908469652594234 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 32757 8937 GIAGSLKTV True PC9_epitope_Rep4 844.5018176634801 844.50072993586 41.918 2 0.04851677859023537 0.0051908469652594234 0.9438714419765777 ['ENSG00000008083|ENST00000341776|JARID2'] 6263 4638 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 24.359 2 0.048500767132510655 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ENSG00000184939|ENST00000563169|ZFP90'] 117010 15726 TYQDIQNTI True PC9_epitope_Rep2 1094.52440358286 1094.52387496793 65.761 1 0.04849471692292664 0.0051908469652594234 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 109552 5009 THAPATLEA True PC9_epitope_Rep4 909.45559574705 909.45448993586 25.888 2 0.048494480215431464 0.0051908469652594234 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 5675 22211 APALLLIPAA True PC9_epitope_Rep5 948.60080342876 948.59970993586 90.445 2 0.04846556008776104 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 116454 13605 TYADTLNHL True PC9_epitope_Rep4 1046.5032742154601 1046.5021699358601 60.225 2 0.04846378795931566 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.K1960N|1|0.26|ENSG00000151779|chr2:15238531-15238531|T/A|missense_variant'] 98828 11799 SITSELHAV True PC9_epitope_Rep6 955.4974605590301 955.49636993586 56.574 2 0.048424057510181945 0.0051908469652594234 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 32449 13035 GGHGPSFPL True PC9_epitope_Rep2 867.42390169595 867.42280993586 55.419 2 0.048418327735351034 0.0051908469652594234 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 27788 21642 FQEGDIILV True PC9_epitope_Rep2 1032.5491617787197 1032.5485749679299 88.72 1 0.04841589360230523 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 62152 7851 LLPGELAK True NCI_RA007_Epitope_Rep1 839.5116540711899 839.51054993586 34.529 2 0.04835335979438101 0.0051908469652594234 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 105561 8285 SVDSHFQEV True PC9_epitope_Rep6 1046.4668887067398 1046.4657899358601 41.481 2 0.048351697414855274 0.0051908469652594234 0.9438714419765777 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 96053 2856 SEAPPTNQA True H1975_Epitope_Rep1 913.41412485789 913.41302993586 14.596 2 0.048347895842770224 0.0051908469652594234 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 109995 10665 THSTLVLTA True PC9_epitope_Rep1 941.5181960036099 941.51708993586 45.913 2 0.048341043566109326 0.0051908469652594234 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 1581 6149 AEFGQAESA True H1975_Epitope_Rep2 908.3875757568799 908.38646993586 28.624 2 0.048331979043004826 0.0051908469652594234 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 70572 12070 LYWSHPRKF True PC9_epitope_Rep5 1232.6454622053996 1232.6438249037901 51.422 3 0.04832476788707428 0.0051908469652594234 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 9814 10560 AYLHTTTTF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 51.421 2 0.04831908294198835 0.0051908469652594234 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 31586 10310 GEFSITYKP True NCI_RA007_Epitope_Rep5 1040.5178616504397 1040.51727496793 46.288 1 0.04830290663031104 0.0051908469652594234 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 132300 12959 VYLPGSRQTL True PC9_epitope_Rep2 1132.62405805448 1132.62296993586 55.139 2 0.04827800757331954 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 113309 14125 TQIHSMVNL True PC9_epitope_Rep5 1041.52771514149 1041.52660993586 59.342 2 0.04827640113873883 0.0051908469652594234 0.9438714419765777 ['ENST00000371873.9_1_1:47834144-47834267:+|nuORF'] 1437 5632 AEEHLTVDA True H1975_Epitope_Rep2 983.45598966987 983.45488993586 26.663 2 0.04827133007143793 0.0051908469652594234 0.9438714419765777 ['ENST00000378952.7_1_10:12209703-12222485:-|nuORF', 'ENSG00000165609|ENST00000491614|NUDT5'] 321 10561 AAIENLNEA True PC9_epitope_Rep4 943.46107505031 943.45996993586 48.354 2 0.04826087834491761 0.0051908469652594234 0.9438714419765777 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 57409 5397 LEIEDAHGHTP True H1975_Epitope_Rep3 1217.56766537717 1217.5660049037901 25.824 3 0.048246076914446365 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 6379 6013 APRQPGLMA True PC9_epitope_Rep6 939.4960210903898 939.49492993586 31.465 2 0.048240965135992436 0.0051908469652594234 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 1288 7243 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 32.794 2 0.04822142594966779 0.0051908469652594234 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 130464 16968 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.49037496793 70.287 1 0.048208110823901376 0.0051908469652594234 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 86567 16580 QRAWTVEQL True PC9_epitope_Rep3 1129.5880068989297 1129.5869099358601 68.913 2 0.04819948063408037 0.0051908469652594234 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 76162 6763 NRSDPVTL True PC9_epitope_Rep6 900.46649478392 900.46538993586 34.827 2 0.04819328260343945 0.0051908469652594234 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 63511 8401 LPKEDPTAV True PC9_epitope_Rep1 968.5178616504398 968.51676993586 37.152 2 0.0481885454573517 0.0051908469652594234 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 85019 19918 QIGAKFWEV True PC9_epitope_Rep1 1076.5654805492 1076.5643899358602 81.433 2 0.04818637081419141 0.0051908469652594234 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 6259 5401 APRPPTAAP True PC9_epitope_Rep3 876.4817509252399 876.48064993586 25.847 2 0.048168060571516964 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ENSG00000184939|ENST00000563169|ZFP90'] 23011 14151 EVISKLYAV True PC9_epitope_Rep6 1020.5855472874398 1020.58444993586 66.301 2 0.04815868400946685 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 70403 20878 LYQFNPAFF True PC9_epitope_Rep6 1145.5545815123298 1145.5534899358602 93.081 2 0.048158384897170045 0.0051908469652594234 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 71078 5477 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38912993586 26.12 2 0.048152590558368374 0.0051908469652594234 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 95466 11923 SALSGHLETV True PC9_epitope_Rep3 1012.5189242796 1012.51782993586 50.883 2 0.048150927350961735 0.0051908469652594234 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 121717 10689 VGLQVVAVK True PC9_epitope_Rep6 911.5804023373498 911.57930993586 51.929 2 0.048145493516205444 0.0051908469652594234 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 131761 15222 VYADQPHIF True PC9_epitope_Rep2 1088.52909504048 1088.5279899358602 63.817 2 0.048133292377493364 0.0051908469652594234 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 132699 17402 VYSEAARVLQF True PC9_epitope_Rep6 1281.67173652289 1281.67062993586 79.552 2 0.048125866258837566 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 84058 8939 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57797496793 39.343 1 0.04812555019065262 0.0051908469652594234 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 25396 20145 FEILPGLSV True H1975_Epitope_Rep3 973.54843350273 973.54788496793 84.278 1 0.048116794263844465 0.0051908469652594234 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 7896 8498 ATASNLVKV True PC9_epitope_Rep2 901.5232813840499 901.52218993586 38.052 2 0.048114100583964904 0.0051908469652594234 0.9438714419765777 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 120328 16240 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 67.456 2 0.048110688374002966 0.0051908469652594234 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 88061 18402 QVVGGIYGV True PC9_epitope_Rep2 890.4861675993399 890.48561496793 76.113 1 0.04809146528655006 0.0051908469652594234 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 4158 9755 AHYSAVTSL True PC9_epitope_Rep2 947.47124581119 947.47014993586 42.861 2 0.048072210898955185 0.0051908469652594234 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 74294 21888 NIIPYITNV True PC9_epitope_Rep1 1045.58079626017 1045.5796899358602 89.006 2 0.048069055380979164 0.0051908469652594234 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 138815 7906 YSDKEFAGSY True H1975_Epitope_Rep3 1165.49276910141 1165.49166993586 35.384 2 0.04806120815679472 0.0051908469652594234 0.9438714419765777 ['ENSG00000109436|ENST00000442267|TBC1D9', 'ENST00000514787.1_1_4:141591792-141598206:-|nuORF'] 87960 12342 QVRDVIIAA True PC9_epitope_Rep1 983.5763795860698 983.57528993586 52.331 2 0.04803700648634354 0.00521316860672713 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 31866 6415 GEQEGAMVAA True H1975_Epitope_Rep2 961.4174959861698 961.41694496793 29.6 1 0.04803629882188278 0.00521316860672713 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 19950 10780 EMDPSGQLNEY True H1975_Epitope_Rep2 1281.5183322262499 1281.51722993586 46.496 2 0.04803246791091025 0.00521316860672713 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 39182 5678 HLGALLAR True NCI_RA007_Epitope_Rep5 849.51847078713 849.51736993586 28.53 2 0.048021836126572265 0.00521316860672713 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 87927 12904 QVPEKLDVV True PC9_epitope_Rep5 1025.5757108797297 1025.57460993586 54.647 2 0.04800379759264047 0.00521316860672713 0.9438714419765777 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000490291.1_1_2:85578731-85581633:-|nuORF'] 45418 5368 ISDSEGFK True PC9_epitope_Rep3 881.4130622287299 881.41196993586 25.723 2 0.04799478091197892 0.00521316860672713 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 35605 6366 GTLDPVEK True PC9_epitope_Rep3 857.44944773745 857.44834993586 29.512 2 0.047988711681470744 0.00521316860672713 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 7884 5424 ATAPPGVLK True NCI_RA007_Epitope_Rep4 852.50690304392 852.50580993586 27.438 2 0.04798817076339927 0.00521316860672713 0.9438714419765777 ['ENSG00000105538|ENST00000222145|RASIP1'] 124253 19402 VLDAEKAFVSV True PC9_epitope_Rep3 1176.63903941228 1176.6379499358602 79.853 2 0.04798271279104728 0.00521316860672713 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 7883 5335 ATAPPGVLK True NCI_RA007_Epitope_Rep4 852.50690304392 852.50580993586 27.086 2 0.04796987772032277 0.00521316860672713 0.9438714419765777 ['ENSG00000105538|ENST00000222145|RASIP1'] 44133 20800 ILPEELQTL True PC9_epitope_Rep2 1054.5910265907 1054.58992993586 85.45 2 0.04795085795667345 0.00521316860672713 0.9438714419765777 ['nc|ENSG00000198315|Q15776-2|ZKSCAN8', 'ENSG00000198315|ENST00000330236|ZKSCAN8'] 22813 6692 EVDYSIGR True H1975_Epitope_Rep3 937.4505103666098 937.44940993586 30.695 2 0.047946177636818806 0.00521316860672713 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 1131 7706 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.4539849679301 34.624 1 0.04793151094001163 0.005232986846173973 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 108260 15263 TEAPPIIFA True H1975_Epitope_Rep3 957.5171333744499 957.51658496793 64.117 1 0.04793134107897455 0.005232986846173973 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 56862 5898 LEDKPPAPP True H1975_Epitope_Rep1 962.5072969667399 962.50618993586 27.758 2 0.047930787170113766 0.005232986846173973 0.9438714419765777 ['ENSG00000180370|ENST00000327134|PAK2', 'ENST00000556425.2_1_15:21937379-21938108:-|nuORF'] 58225 13905 LESTPSPVVF True H1975_Epitope_Rep1 1074.55972646242 1074.55917496793 58.637 1 0.04791326817060887 0.005232986846173973 0.9438714419765777 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 34932 17728 GQWIAETGV True PC9_epitope_Rep4 959.4712458111899 959.47014993586 76.215 2 0.04789194129261721 0.005232986846173973 0.9438714419765777 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 44864 20808 IQAGLLSAL True PC9_epitope_Rep4 884.53311779176 884.53202993586 88.188 2 0.04789040157117497 0.005232986846173973 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 114979 5748 TTISKVSQV True PC9_epitope_Rep4 961.5444107514498 961.54330993586 28.942 2 0.047857593637062136 0.005232986846173973 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 48717 8004 KENAFSLGA True H1975_Epitope_Rep2 935.4712458111899 935.47014993586 35.735 2 0.04784858617044514 0.005232986846173973 0.9438714419765777 ['ENSG00000109111|ENST00000314616|SUPT6H', 'nc|ENSG00000109111|Q7KZ85-2|SUPT6H'] 71468 18263 MKFNPFVTSD True PC9_epitope_Rep4 1184.5535955361597 1184.5524899358602 78.319 2 0.047843710524100705 0.005232986846173973 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000578115.1_1_17:8285406-8285628:-|nuORF'] 113103 10251 TQAEQTLNV True PC9_epitope_Rep4 1002.49818883502 1002.49708993586 47.113 2 0.04783658401006699 0.005232986846173973 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 139443 4558 YTERRQPLY True H1975_Epitope_Rep3 1224.6251206836398 1224.6234749037899 22.652 3 0.047828011721357575 0.005232986846173973 0.9438714419765777 ['ENSG00000113719|ENST00000393784|ERGIC1', 'nc|ENSG00000113719|Q969X5-2|ERGIC1'] 35550 14703 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.51670993586 61.821 2 0.04782165352092935 0.005232986846173973 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 9475 3569 AVYDRPGASPK True NCI_RA007_Epitope_Rep4 1159.5985715826298 1159.59691490379 19.75 3 0.04781261297569172 0.005232986846173973 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 29575 17487 FVIRNIVEA True PC9_epitope_Rep2 1059.6076797143498 1059.60658993586 72.52 2 0.04780268834826126 0.005232986846173973 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 37665 14651 HAGVISVL True PC9_epitope_Rep5 794.46503823194 794.46394993586 61.358 2 0.047791598841842295 0.005232986846173973 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 135060 20691 YALDLSTFL True H1975_Epitope_Rep2 1041.53826274185 1041.53767496793 85.695 1 0.047762646859672485 0.005232986846173973 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 43527 12467 IIDLVLDR True NCI_RA007_Epitope_Rep1 955.57023157647 955.56912993586 52.471 2 0.04776078211531608 0.005232986846173973 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 99366 11049 SLDVGGPLRY True H1975_Epitope_Rep2 1075.56620882519 1075.56567496793 47.53 1 0.047759544217232525 0.005232986846173973 0.9438714419765777 ['ENSG00000176894|ENST00000317479|PXMP2'] 41915 17253 IEAFTPLLA True H1975_Epitope_Rep2 973.5484335027298 973.54788496793 71.654 1 0.04774781229302122 0.005232986846173973 0.9438714419765777 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF', 'nc|ENSG00000014138|Q14181-2|POLA2'] 103848 15570 SRIPFNQAL True PC9_epitope_Rep5 1044.5716285588 1044.5705299358601 64.899 2 0.0477347722287916 0.005232986846173973 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303610-112303748:+|nuORF'] 105430 14569 SVALVIHNV True PC9_epitope_Rep1 950.5549158655001 950.55380993586 60.864 2 0.04773457163120309 0.005232986846173973 0.9438714419765777 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2'] 60637 5934 LITEDVQGK True PC9_epitope_Rep6 1001.5393253710098 1001.53822993586 31.117 2 0.04771041298107491 0.005232986846173973 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000442655.2_1_4:9032265-9032511:+|nuORF'] 10971 9313 DC[Carbamidomethyl]LTESNLIK True H1975_Epitope_Rep1 1191.58053883942 1191.57944993586 40.729 2 0.04770525880394755 0.005232986846173973 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 253 13501 AAGGVGSIVRV True PC9_epitope_Rep3 984.5716285588 984.57052993586 56.982 2 0.04770182754997838 0.005232986846173973 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5'] 40215 6533 HRGTGLVL True PC9_epitope_Rep2 851.49773534255 851.49662993586 30.544 2 0.04769902259917226 0.005232986846173973 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 21426 17041 ERNRYFISL True PC9_epitope_Rep5 1196.6302060640799 1196.62855490379 70.567 3 0.04768280149042247 0.005232986846173973 0.9438714419765777 ['ENSG00000163481|ENST00000295704|RNF25'] 32994 17849 GIVGGLSTV True PC9_epitope_Rep2 801.4596184983301 801.4590749679301 73.956 1 0.04768085056424909 0.005232986846173973 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 72527 23019 MVDGTLLLL True PC9_epitope_Rep2 973.5518046310099 973.55125496793 94.036 1 0.047674233851602674 0.005232986846173973 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 131027 19408 VVLKMVTEI True PC9_epitope_Rep1 1030.6096538602999 1030.60854993586 79.463 2 0.04767150036116205 0.005232986846173973 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS', 'ENST00000514075.2_1_4:8176279-8176723:+|nuORF'] 117083 20007 TYQVLAVTF True PC9_epitope_Rep6 1040.5542471591598 1040.5531499358601 89.623 2 0.04766296470188301 0.005232986846173973 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 131 6329 AAAYPHTSL True NCI_RA007_Epitope_Rep5 929.46068112749 929.45958993586 31.021 2 0.047655957622713914 0.005232986846173973 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 69865 21028 LYAPTILLW True NCI_RA007_Epitope_Rep5 1088.6270181766 1088.62592993586 87.894 2 0.04762700409030843 0.005232986846173973 0.9438714419765777 ['ENSG00000081051|ENST00000395792|AFP'] 48540 6128 KEFTEAVEA True NCI_RA007_Epitope_Rep3 1022.4920408254197 1022.4909499358599 31.092 2 0.04760693479479111 0.005252150767622035 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1'] 96834 9983 SESLIKQIP True H1975_Epitope_Rep2 1013.57571087973 1013.5746099358599 43.389 2 0.0476060944770626 0.005252150767622035 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 88950 5092 REDGPGIPA True H1975_Epitope_Rep2 910.4508447197799 910.44974993586 24.668 2 0.04759446618814064 0.005252150767622035 0.9438714419765777 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF', 'ENST00000568642.5_1_16:46706372-46712929:-|nuORF'] 39378 10646 HLVDEPQNLIK True PC9_epitope_Rep6 1304.7088503076 1304.7077499358602 51.768 2 0.0475792741257257 0.005252150767622035 0.9438714419765777 ['CON__P02769'] 127621 15485 VRDGATLIL True PC9_epitope_Rep1 956.5654805492 956.56438993586 64.385 2 0.047570574794513175 0.005252150767622035 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 731 14691 AAVPGKTFVNI True PC9_epitope_Rep4 1115.63389446219 1115.63278993586 64.442 2 0.04755475000159779 0.005252150767622035 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 27968 19917 FQSSAVMAL True PC9_epitope_Rep1 952.4688032830398 952.4682549679301 81.429 1 0.04754890622890862 0.005252150767622035 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 102334 5607 SPVFTSRSA True PC9_epitope_Rep4 950.48214484806 950.48104993586 28.361 2 0.047548438245822194 0.005252150767622035 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 61967 11763 LLLPGELAK True NCI_RA007_Epitope_Rep2 952.5957180483199 952.59462993586 50.354 2 0.047538231929861875 0.005252150767622035 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 39734 12222 HPWETVTTAA True PC9_epitope_Rep5 1111.52982331647 1111.5287299358602 51.999 2 0.0475282239940522 0.005252150767622035 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 120592 12022 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.46360993586 51.323 2 0.04751145892245454 0.005252150767622035 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 101897 10106 SPLKHFVTA True PC9_epitope_Rep5 998.5549158654999 998.55380993586 43.857 2 0.04750211851710777 0.005252150767622035 0.9438714419765777 ['ENSG00000116688|ENST00000235329|MFN2', 'ENST00000497302.1_1_1:12042112-12052340:+|nuORF'] 2220 7765 AENVAVPEA True H1975_Epitope_Rep2 898.4396113297399 898.4390649679301 34.816 1 0.047489320952313716 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 73763 14738 NHASLISAL True PC9_epitope_Rep2 924.50288029264 924.5023349679301 61.956 1 0.04748684109100818 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 87029 10931 QSDGGGLLY True H1975_Epitope_Rep2 908.4239612655999 908.42286993586 47.079 2 0.04748022995104602 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'ENST00000418472.6_1_18:46856042-46938282:-|nuORF'] 103596 13603 SRDKTIIM[Oxidation]W True PC9_epitope_Rep5 1164.59612943492 1164.59449490379 57.346 3 0.04746055846369412 0.005252150767622035 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 21656 12192 ERTSFNYAM True PC9_epitope_Rep2 1117.4862442523297 1117.4851499358601 52.209 2 0.04745492092735242 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 3391 18952 [Acetylation]-AGITTIEAVK True PC9_epitope_Rep5 1043.58627587973 1043.5851699358602 77.922 2 0.04745210422597202 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 6766 9071 AQEPGNYEV True PC9_epitope_Rep6 1005.4403396057298 1005.43924993586 44.957 2 0.047438729874014755 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 60286 18154 LIENVASL True PC9_epitope_Rep4 857.4858332461699 857.48472993586 77.893 2 0.04743621769498386 0.005252150767622035 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2', 'nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1'] 9917 17016 AYPHNLMTF True PC9_epitope_Rep4 1092.50625142092 1092.5051499358601 73.445 2 0.04742436226744008 0.005252150767622035 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 115625 22623 TVISILNTI True PC9_epitope_Rep5 972.58554728744 972.58444993586 92.018 2 0.047420275681388256 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 31365 5540 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.3913849679301 26.358 1 0.04741904168761492 0.005252150767622035 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 86038 14343 QPLGTLPQA True PC9_epitope_Rep4 923.5076313199098 923.50708496793 63.075 1 0.0474103270132538 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 9150 19492 AVMPTLIQA True PC9_epitope_Rep4 942.5208388558998 942.51974993586 83.092 2 0.047403204958466304 0.005252150767622035 0.9438714419765777 ['ENSG00000150403|ENST00000434316|TMCO3', 'nc|ENSG00000150403|Q6UWJ1-2|TMCO3'] 20981 17233 ERADPLFL True PC9_epitope_Rep4 959.5076313199099 959.50652993586 74.294 2 0.047393347363064164 0.005252150767622035 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 84614 4871 QHDPSAVAV True PC9_epitope_Rep4 922.4508447197799 922.44974993586 25.325 2 0.04737501899463818 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 82811 12517 PVSIQGSSV True PC9_epitope_Rep2 872.46034677432 872.45924993586 53.454 2 0.04737399429117523 0.005252150767622035 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'ENST00000572588.1_1_16:14341268-14341367:+|nuORF'] 39837 7249 HQGGPAVAL True PC9_epitope_Rep2 848.4504507969599 848.44934993586 33.272 2 0.04737144917291402 0.005252150767622035 0.9438714419765777 ['ENSG00000231274|ENST00000612221|SBK3'] 29424 22061 FVFPGELLL True PC9_epitope_Rep6 1033.5848190114498 1033.58427496793 97.791 1 0.04736812204992794 0.005252150767622035 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 47435 12037 IYIKQIKTF True PC9_epitope_Rep4 1152.6906810623198 1152.6890249037901 54.105 3 0.04736702866651774 0.005252150767622035 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 21285 17117 ERIPDVAAL True PC9_epitope_Rep3 982.5447451046199 982.54364993586 70.994 2 0.047366973836545756 0.005252150767622035 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 107914 20996 TAVPSLFSV True PC9_epitope_Rep4 919.50148331031 919.5009349679301 88.923 1 0.0473479265419433 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1'] 25054 14473 FDDPGLM[Oxidation]L True H1975_Epitope_Rep1 922.4106200810199 922.4100749679301 60.87 1 0.04733937659648344 0.005252150767622035 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 133002 16312 VYVLTVTEL True NCI_RA007_Epitope_Rep4 1035.5852129342697 1035.5841099358602 70.742 2 0.04733233204293532 0.005252150767622035 0.9438714419765777 ['ENSG00000196368|ENST00000375992|NUDT11', 'ENSG00000122824|ENST00000356450|NUDT10'] 17412 5258 EHFPNHQQL True PC9_epitope_Rep4 1148.53630567924 1148.53465490379 26.924 3 0.047331481522102516 0.005252150767622035 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 92239 9915 RQKAVSLFL True NCI_RA007_Epitope_Rep4 1060.6393141958 1060.63820993586 44.984 2 0.047327709921157986 0.005252150767622035 0.9438714419765777 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 84897 16400 QHSITPLAL True PC9_epitope_Rep3 978.5498304850599 978.54872993586 68.221 2 0.047306911135385786 0.005275289309222251 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 136382 12419 YHDISTEL True PC9_epitope_Rep1 976.45017601344 976.44906993586 52.632 2 0.04730646307131039 0.005275289309222251 0.9438714419765777 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 123765 14914 VISGVLQL True H1975_Epitope_Rep1 827.5116540711899 827.51110496793 62.604 1 0.047298608890475144 0.005275289309222251 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 35162 10519 GSDDGVLAY True H1975_Epitope_Rep2 895.3923267841499 895.39177496793 45.481 1 0.04729796942615819 0.005275289309222251 0.9438714419765777 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 87413 4940 QTDRANRFEY True H1975_Epitope_Rep2 1298.6003624877799 1298.59870490379 24.085 3 0.04729387328977201 0.005275289309222251 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5'] 48513 11935 KEFPGFLEN True NCI_RA007_Epitope_Rep2 1079.5287606873098 1079.52766993586 51.028 2 0.047280895224515514 0.005296912114014252 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 5799 16028 APFGGFKMS True PC9_epitope_Rep1 940.4476739156399 940.44656993586 66.464 2 0.04723814097795275 0.005296912114014252 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 132604 13659 VYPQPGMQRF True PC9_epitope_Rep5 1221.5964634076497 1221.5953699358602 57.562 2 0.04723454497805128 0.005296912114014252 0.9438714419765777 ['ENSG00000151929|ENST00000369085|BAG3'] 35011 11148 GRAPGGLSL True PC9_epitope_Rep5 826.4661008611 826.4650099358599 47.865 2 0.047232017135459714 0.005296912114014252 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 108214 6189 TEADVNPKAYP True H1975_Epitope_Rep3 1203.5771674317098 1203.57606993586 28.818 2 0.0472318120956139 0.005296912114014252 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 21014 7413 ERAQGVVL True PC9_epitope_Rep2 870.4923156089399 870.49120993586 33.891 2 0.047228144103408636 0.005296912114014252 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 21838 8501 ESDYALRY True H1975_Epitope_Rep2 1015.46107505031 1015.45996993586 37.653 2 0.04720353822541278 0.005296912114014252 0.9438714419765777 ['nc|ENSG00000179119|Q68D10-2|SPTY2D1', 'ENSG00000179119|ENST00000336349|SPTY2D1'] 76232 11064 NSATGVPTV True PC9_epitope_Rep1 844.42904664604 844.4284949679301 47.446 1 0.04719518394676362 0.005296912114014252 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 29794 12988 FVTFDDHD True PC9_epitope_Rep3 994.40322582102 994.40212993586 54.985 2 0.047192242211090266 0.005296912114014252 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 71841 19533 MPFGNVVSA True PC9_epitope_Rep2 920.4425885351999 920.44148993586 80.517 2 0.04718983704036296 0.005296912114014252 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 24227 17473 EYVSQHLVF True PC9_epitope_Rep2 1120.5553097883198 1120.5542099358602 72.462 2 0.047184371408528984 0.005296912114014252 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 5869 14715 APGNPVLAV True PC9_epitope_Rep6 836.4756029156399 836.4745099358599 68.549 2 0.04714175348710746 0.005296912114014252 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 108949 5441 TETQPPAAP True H1975_Epitope_Rep3 910.4396113297398 910.4390649679301 25.987 1 0.04713915991058884 0.005296912114014252 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 71072 5406 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 25.856 1 0.04713748289376191 0.005296912114014252 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 1149 5991 AEAPSSPDV True H1975_Epitope_Rep3 871.39232678415 871.39122993586 28.057 2 0.04712697315910395 0.005296912114014252 0.9438714419765777 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 6225 4516 APRGPGTVPA True PC9_epitope_Rep1 921.5032146458099 921.50210993586 22.25 2 0.047120585756329166 0.005296912114014252 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 125050 16764 VLPGHFNTF True PC9_epitope_Rep3 1030.5236157372199 1030.5225099358602 69.628 2 0.0471127435561791 0.005296912114014252 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 127631 13898 VRDPRVLIL True PC9_epitope_Rep4 1079.68151336095 1079.68040993586 61.359 2 0.0470917511833907 0.005320033250207814 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 113292 15239 TQIDHYVGI True PC9_epitope_Rep1 1044.52400966004 1044.52347496793 63.436 1 0.04707489367105477 0.005320033250207814 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 14034 15275 DSDAPLFY True H1975_Epitope_Rep2 926.4021631918599 926.40106993586 63.913 2 0.047067683607794286 0.005320033250207814 0.9438714419765777 ['ENSG00000186532|ENST00000305513|SMYD4', 'ENST00000573937.5_1_17:1707859-1733034:-|nuORF'] 1696 5680 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 26.847 2 0.04705573528212527 0.005320033250207814 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 86115 11726 QPQPQPYAV True PC9_epitope_Rep5 1026.5134449763398 1026.51287496793 50.103 1 0.04704711715807728 0.005320033250207814 0.9438714419765777 ['ENST00000573807.5_1_17:7216558-7216813:-|nuORF', 'ENST00000571697.5_1_17:7216461-7217028:-|nuORF', 'nc|ENSG00000132522|Q13227-2|GPS2', 'ENSG00000132522|ENST00000380728|GPS2'] 95300 9450 SAEQVIAGFNR True H1975_Epitope_Rep1 1190.6043852390599 1190.6032899358602 41.266 2 0.047041342865136844 0.005343148895749228 0.9438714419765777 ['ENSG00000143256|ENST00000368010|PFDN2'] 59810 7554 LHDDRGPVL True PC9_epitope_Rep5 1020.5352430500799 1020.53414993586 34.006 2 0.04703202186764927 0.005343148895749228 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 418 19948 AALPNVYEV True PC9_epitope_Rep3 974.5072969667399 974.5067449679301 81.973 1 0.046993264162711434 0.005343148895749228 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 138688 14069 YRTEFTTAL True PC9_epitope_Rep4 1100.55022440788 1100.54912993586 62.026 2 0.046992760500777955 0.005343148895749228 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 77024 21056 NVVEALIAL True PC9_epitope_Rep6 940.5593325395998 940.55822993586 93.814 2 0.04697186991833419 0.005343148895749228 0.9438714419765777 ['ENSG00000242028|ENST00000442995|HYPK', 'ENST00000458412.1_2_15:44093902-44094001:+|nuORF'] 94842 9589 RYMNHMQSL True PC9_epitope_Rep5 1178.5324832521 1178.5308449037902 41.845 3 0.04696364592674357 0.005359260137538535 0.9438714419765777 ['ENSG00000166233|ENST00000379887|ARIH1'] 87714 20881 QVEEELFSV True PC9_epitope_Rep2 1078.51825557326 1078.51767496793 85.763 1 0.0469612379979612 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 120182 15153 VFLKAGASF True PC9_epitope_Rep2 938.5225531080598 938.52144993586 63.543 2 0.046960788053094275 0.005359260137538535 0.9438714419765777 ['ENST00000368875.6_2_1:151298654-151299818:-|nuORF'] 113373 22380 TQLGAFYIV True PC9_epitope_Rep1 1010.5436824754598 1010.5431749679301 90.9 1 0.046948797929093435 0.005359260137538535 0.9438714419765777 ['ENSG00000143753|ENST00000323699|DEGS1'] 91521 10572 RPAAPLIGA True PC9_epitope_Rep1 864.51813643396 864.51702993586 45.556 2 0.046944751935136246 0.005359260137538535 0.9438714419765777 ['ENSG00000111276|ENST00000228872|CDKN1B'] 84538 14800 QHADPPVQIL True PC9_epitope_Rep3 1116.5927579262 1116.5916699358602 62.063 2 0.04693580042298432 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 44872 5117 IQASTM[Oxidation]AFK True H1975_Epitope_Rep3 1011.50591744819 1011.50480993586 24.792 2 0.04692880347483401 0.005359260137538535 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 71086 6697 METAAAVAA True H1975_Epitope_Rep3 833.3953039896098 833.39475496793 30.715 1 0.046925037541753215 0.005359260137538535 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 86360 13928 QQLEPVTGQV True PC9_epitope_Rep5 1097.57168812845 1097.5705899358602 58.595 2 0.04692250881110707 0.005359260137538535 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 77590 12042 NYTARFSRF True PC9_epitope_Rep5 1160.57269118796 1160.5710449037902 51.313 3 0.046921344059325305 0.005359260137538535 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 130423 11338 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 50.261 2 0.04691495131426273 0.005359260137538535 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 104386 12288 SSGGVIYL True H1975_Epitope_Rep2 794.41741933318 794.4168749679301 52.349 1 0.04691189524430143 0.005359260137538535 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9'] 57275 5662 LEGELEAR True PC9_epitope_Rep2 915.4661604307499 915.46506993586 27.166 2 0.04690550571445636 0.005359260137538535 0.9438714419765777 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'ENST00000502356.3_1_1:112958760-112958892:+|nuORF', 'CTTNBP2NL-CAPZA1|1|fusion'] 45169 16744 IRDPFIHEI True PC9_epitope_Rep1 1138.6134933707801 1138.6118549037901 69.234 3 0.046905395303244224 0.005359260137538535 0.9438714419765777 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 35935 19436 GVAPGFQVV True PC9_epitope_Rep5 872.4756029156399 872.4745099358599 79.811 2 0.04689984290742866 0.005359260137538535 0.9438714419765777 ['ENSG00000165724|ENST00000298585|ZMYND19'] 103344 4288 SQVEGEHQL True PC9_epitope_Rep4 1025.47778774361 1025.4766899358601 22.904 2 0.04689939331633661 0.005359260137538535 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 124799 5123 VLLGETGK True NCI_RA007_Epitope_Rep5 815.47526856247 815.47416993586 26.402 2 0.04689819228027652 0.005359260137538535 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 37972 11920 HEFPMNFNP True NCI_RA007_Epitope_Rep4 1131.4807649490701 1131.47966993586 52.852 2 0.04689200359522211 0.005359260137538535 0.9438714419765777 ['ENSG00000085719|ENST00000517490|CPNE3', 'ENST00000523588.1_1_8:87563280-87563554:+|nuORF'] 116257 18548 TVVAVVAGV True PC9_epitope_Rep1 813.4960040070499 813.49490993586 76.135 2 0.046885747691441534 0.005359260137538535 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 86179 20622 QPSSLLPLA True PC9_epitope_Rep5 924.5280324113199 924.52692993586 84.373 2 0.04688010889286263 0.005359260137538535 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 44829 19985 IPVYSPLSA True PC9_epitope_Rep1 945.5171333744499 945.51602993586 81.697 2 0.046862184323009405 0.005359260137538535 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 17479 11296 EHGPENIVM True PC9_epitope_Rep5 1024.46478053176 1024.4636899358602 48.443 2 0.04685208049017525 0.005359260137538535 0.9438714419765777 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 48369 8176 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54861496793 36.428 1 0.04684205587110585 0.005359260137538535 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 88193 21592 QYAIISEAW True PC9_epitope_Rep5 1079.52876068731 1079.52766993586 88.095 2 0.046818223085711944 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'ENSG00000165475|ENST00000298248|CRYL1'] 138883 17615 YSDSGLFGIY True H1975_Epitope_Rep2 1120.5076908895599 1120.5065899358601 73.073 2 0.04680693493196208 0.005359260137538535 0.9438714419765777 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'ENSG00000140740|ENST00000268379|UQCRC2'] 4442 14607 AIYDHINEGV True PC9_epitope_Rep1 1129.54038800017 1129.53928993586 61.01 2 0.046775195892525115 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000184076|Q9UDW1-2|UQCR10'] 70949 9226 MEMPSQPAP True H1975_Epitope_Rep3 986.4201388384598 986.41904993586 40.482 2 0.04675878768243131 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.D632Efs*4|1|0.14|ENSG00000048028|chr11:113812336-113812352|TCAGGCCTCCATAGGAA/-|frameshift_variant'] 86172 2543 QPSQPVTSA True PC9_epitope_Rep6 913.4505103666099 913.4499649679301 14.71 1 0.046744256559780734 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 67056 20934 LTATGALLLL True PC9_epitope_Rep3 984.62193279616 984.62082993586 85.8 2 0.04674329754268897 0.005359260137538535 0.9438714419765777 ['ENSG00000187492|ENST00000412678|CDHR4'] 11087 4396 DEAQSKRGILT True NCI_RA007_Epitope_Rep4 1216.6411646706 1216.63951490379 23.261 3 0.04671635344764411 0.005359260137538535 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000411655.1_1_10:70782635-70782722:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 102458 11314 SPYHNFDSV True PC9_epitope_Rep1 1064.45632402304 1064.4552299358602 48.399 2 0.04668216634521323 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1', 'NEDD1|p.I571Nfs*8|1|0.31|ENSG00000139350|chr12:96945743-96945744|-/A|frameshift_variant'] 139874 15502 YVDPVNKVL True PC9_epitope_Rep3 1045.58079626017 1045.5796899358602 64.778 2 0.04667405433819103 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 35299 8147 GSSAINILK True NCI_RA007_Epitope_Rep4 901.5232813840499 901.52218993586 38.127 2 0.04667164189850225 0.005359260137538535 0.9438714419765777 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 71061 5428 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 25.905 1 0.04662636243118601 0.005359260137538535 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 89321 8232 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64349490379 39.516 3 0.04661653788549934 0.005359260137538535 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 70006 19827 LYGAPGVEF True PC9_epitope_Rep4 951.4701831820299 951.46963496793 84.393 1 0.04661019629567182 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'LLGL2|p.G740Afs*31|1|0.09|ENSG00000073350|chr17:75571705-75571705|G/-|frameshift_variant', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2'] 98643 9241 SIPGGPVRL True H1975_Epitope_Rep3 894.52870111766 894.52760993586 40.537 2 0.04660539273065196 0.005359260137538535 0.9438714419765777 ['CON__P12763'] 1572 4923 AEFAEVSK True PC9_epitope_Rep6 879.43379767331 879.43270993586 26.496 2 0.04659456697286866 0.005359260137538535 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 101540 10166 SPAPQGVTV True PC9_epitope_Rep2 854.4497820906199 854.44868993586 44.441 2 0.046591432217502546 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'TULP3-GGNBP2|1|fusion'] 23751 23724 EYIQFVPLL True PC9_epitope_Rep5 1120.6168474157198 1120.61627496793 96.235 1 0.04657219094308169 0.005359260137538535 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 124528 9733 VLGAFSDG True NCI_RA007_Epitope_Rep3 764.37046914076 764.36992496793 45.354 1 0.0465452130522612 0.005359260137538535 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66N|1|0.32|ENSG00000223609|chr11:5234108-5234108|C/A|missense_variant'] 25884 14418 FGIDRDAIAQA True PC9_epitope_Rep4 1175.59348620219 1175.5923899358602 63.367 2 0.04654340347425173 0.005359260137538535 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53259774-53260053:-|nuORF'] 133287 15784 WELLPSAAA True H1975_Epitope_Rep2 956.4967322830398 956.49562993586 65.894 2 0.04654308430517711 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A', 'ENST00000487089.1_1_6:31603319-31603595:+|nuORF', 'ENST00000487839.1_1_6:31603188-31603595:+|nuORF'] 9531 20916 AYAENIALL True PC9_epitope_Rep3 976.5229470308799 976.52239496793 85.73 1 0.04652951706615374 0.005359260137538535 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 2867 7682 AEYINEAAA True NCI_RA007_Epitope_Rep5 950.4345259492999 950.43342993586 36.252 2 0.046523970504471546 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 74430 13707 NIVPVIAKA True PC9_epitope_Rep3 923.5804023373499 923.57930993586 57.805 2 0.04651810056330618 0.005359260137538535 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9'] 6960 15396 AQMPTIERL True PC9_epitope_Rep5 1057.55901526977 1057.5579099358602 64.228 2 0.046515924277616055 0.005359260137538535 0.9438714419765777 ['ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'ENST00000529565.1_1_11:104815482-104817977:-|nuORF'] 28671 9393 FSSPSVHNV True PC9_epitope_Rep1 972.4664947839201 972.46538993586 40.989 2 0.046512627416225145 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 112965 20071 TPSIPVLTA True PC9_epitope_Rep2 897.51713337445 897.51602993586 82.609 2 0.0465106073036202 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 109663 9770 THDTFQNEL True PC9_epitope_Rep4 1103.48835242731 1103.48724993586 45.221 2 0.04651037163550882 0.005359260137538535 0.9438714419765777 ['ENSG00000198642|ENST00000359039|KLHL9'] 53537 17481 KVPEWVDTV True PC9_epitope_Rep5 1071.5600608155898 1071.5589699358602 72.242 2 0.04650600563480999 0.005359260137538535 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 62893 23189 LMSLIINTF True PC9_epitope_Rep3 1050.57835373202 1050.5772499358602 94.467 2 0.046504789459542846 0.005359260137538535 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 130550 19856 VTYGFPIML True H1975_Epitope_Rep3 1039.5412399473098 1039.5401499358602 83.13 2 0.04649004811790867 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF'] 1666 9081 AEGGMTAVV True H1975_Epitope_Rep2 833.3953039896099 833.39475496793 39.882 1 0.046484307025238605 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1'] 3972 15265 AHEPTYFTV True PC9_epitope_Rep5 1063.49746055903 1063.49636993586 63.726 2 0.04648342843606367 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 106056 11466 SVLSPLLNK True NCI_RA007_Epitope_Rep2 969.5858816406101 969.58478993586 49.193 2 0.046482857455374 0.005359260137538535 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 108282 4564 TEAVPRAPA True H1975_Epitope_Rep2 910.4872302284998 910.48612993586 22.662 2 0.046472604650220795 0.005359260137538535 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 8557 13912 AVAAELVSA True PC9_epitope_Rep2 829.4545331178899 829.45342993586 58.791 2 0.04647101699155317 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-4|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF', 'NASP|p.T209Dfs*3|1|0.09|ENSG00000132780|chr1:45607535-45607536|-/G|frameshift_variant'] 102811 14656 SQFPGAITL True NCI_RA007_Epitope_Rep3 932.4967322830399 932.49562993586 65.024 2 0.04646950148823052 0.005359260137538535 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 39586 10006 HPKYSDMIVA True PC9_epitope_Rep2 1159.56957995347 1159.56848993586 43.816 2 0.04645633642374986 0.005359260137538535 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 140504 8484 YYINGKTGL True NCI_RA007_Epitope_Rep5 1027.53384606775 1027.53274993586 39.317 2 0.046425895028399056 0.005381952676750913 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 63460 12168 LPHDLAVQA True PC9_epitope_Rep3 962.5185303567799 962.51742993586 51.841 2 0.046406052474672596 0.005381952676750913 0.9438714419765777 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'ENST00000487671.1_1_22:31840579-31845472:-|nuORF', 'nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1'] 135517 10758 YEEAAMAIA True H1975_Epitope_Rep2 967.4320834211499 967.43153496793 46.41 1 0.046402101337175684 0.005381952676750913 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 52350 11617 KPFGQVIST True PC9_epitope_Rep5 975.5389314481899 975.53782993586 49.68 2 0.04640052959107077 0.005381952676750913 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 132728 13205 VYSHFNETL True PC9_epitope_Rep5 1108.5189242796 1108.5178299358602 55.8 2 0.04640006948185116 0.005381952676750913 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 1087 4956 AEAPASPAP True H1975_Epitope_Rep3 809.3919328613299 809.3913849679301 24.191 1 0.04638705799843823 0.005381952676750913 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 48908 7497 KEVEQFTQVA True NCI_RA007_Epitope_Rep4 1177.5979028762902 1177.5968099358602 35.482 2 0.04638327115420636 0.005381952676750913 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2011477-2011732:+|nuORF'] 5184 15911 ALPGLLHA True PC9_epitope_Rep3 790.47012361238 790.46902993586 66.35 2 0.04637901590519194 0.005381952676750913 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 88383 7028 QYNPVKQQL True NCI_RA007_Epitope_Rep4 1116.5927579262 1116.5916699358602 33.66 2 0.04636566840520726 0.005404892850369808 0.9438714419765777 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 107253 10642 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59198993586 45.922 2 0.04636488860714585 0.005404892850369808 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 89639 8424 REVDPLRIPP True H1975_Epitope_Rep1 1190.6771562565 1190.6760499358602 37.331 2 0.046359139442564645 0.005404892850369808 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 127100 9748 VQASHFEGL True PC9_epitope_Rep6 986.4821448480599 986.48104993586 47.918 2 0.04635699035080897 0.005404892850369808 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 2063 10078 AELGEAPVP True H1975_Epitope_Rep3 881.4494477374499 881.4488949679301 43.803 1 0.04635538433983847 0.005404892850369808 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 60612 16189 LISQIVSSITA True H1975_Epitope_Rep1 1130.6546894764201 1130.65358993586 67.618 2 0.046344701843869296 0.005404892850369808 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 1204 10579 AEDELNIEA True H1975_Epitope_Rep3 1002.45056993626 1002.44946993586 45.761 2 0.046341821103550576 0.0054257688480310855 0.9438714419765777 ['ENST00000564047.1_1_16:89590622-89596095:+|nuORF', 'nc|ENSG00000197912|Q9UQ90-2|SPG7', 'SPG7|p.E528Rfs*57|1|0.22|ENSG00000197912|chr16:89548051-89548051|G/-|frameshift_variant', 'ENSG00000197912|ENST00000645818|SPG7'] 3500 14627 AGLQFPVGR True PC9_epitope_Rep3 943.5239500903898 943.52284993586 61.394 2 0.046336783227643216 0.0054257688480310855 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 7024 14609 AQSELETAL True PC9_epitope_Rep4 960.47639076128 960.47528993586 64.123 2 0.04631443741776149 0.0054257688480310855 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 75781 4656 NRAPNTAEL True PC9_epitope_Rep6 984.4988575413599 984.49776993586 25.234 2 0.04631439953392884 0.0054257688480310855 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 106625 19053 SWPEGHFATI True PC9_epitope_Rep5 1143.53490869691 1143.53380993586 78.315 2 0.04631274530759764 0.0054257688480310855 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1'] 113746 8717 TRDPAQRVVL True PC9_epitope_Rep3 1153.6567551650899 1153.65511490379 38.483 3 0.046307439126940714 0.0054257688480310855 0.9438714419765777 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 38853 13881 HIGDAVVI True PC9_epitope_Rep5 822.4599528515 822.45940496793 58.413 1 0.0463065238908311 0.0054257688480310855 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 92240 12382 RQKFFEDIL True NCI_RA007_Epitope_Rep4 1194.6397081186199 1194.6386099358601 54.624 2 0.04629890576960957 0.0054257688480310855 0.9438714419765777 ['nc|ENSG00000244274|Q9BQY9-3|DBNDD2', 'ENSG00000244274|ENST00000372710|DBNDD2', 'nc|ENSG00000244274|Q9BQY9|DBNDD2', 'nc|ENSG00000244274|Q9BQY9-4|DBNDD2'] 11928 16098 DHSIIETL True PC9_epitope_Rep4 926.47091145802 926.46980993586 69.857 2 0.04628910475879302 0.0054257688480310855 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 25506 7239 FEQEMATA True NCI_RA007_Epitope_Rep5 925.3851332287298 925.38402993586 34.522 2 0.04628754601229406 0.0054257688480310855 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'POTEE|p.A931S|1|0.19|ENSG00000188219|chr2:131264246-131264246|G/T|missense_variant', 'ENST00000428275.1_1_X:53172253-53172460:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 9496 7263 AWAPKPYHKF True PC9_epitope_Rep4 1243.6502132326698 1243.64857490379 35.249 3 0.04627561675002281 0.0054257688480310855 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 1257 5466 AEDPGPAVA True H1975_Epitope_Rep2 825.38684748089 825.3862949679301 26.051 1 0.04627495915587712 0.0054257688480310855 0.9438714419765777 ['nc|ENSG00000123146|P48960-2|ADGRE5', 'nc|ENSG00000123146|P48960-3|ADGRE5', 'ENSG00000123146|ENST00000242786|ADGRE5'] 96050 2839 SEAPPTNQA True H1975_Epitope_Rep1 913.41412485789 913.41357496793 14.57 1 0.046261806694347214 0.0054257688480310855 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 34453 13940 GQATTAYFL True NCI_RA007_Epitope_Rep5 970.47599683846 970.47488993586 60.305 2 0.046235388360639076 0.0054257688480310855 0.9438714419765777 ['nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 77172 22560 NYGDYFNVF True PC9_epitope_Rep2 1137.47672511445 1137.4761749679299 92.27 1 0.04622032770402737 0.0054257688480310855 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 10190 4770 C[Carbamidomethyl]C[Carbamidomethyl]TESLVNR True NCI_RA007_Epitope_Rep5 1137.49067856863 1137.48958993586 25.032 2 0.04621350502667249 0.0054257688480310855 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 75264 7273 NPNQYHYVA True PC9_epitope_Rep5 1104.49885754136 1104.49776993586 32.94 2 0.04621138401751258 0.0054257688480310855 0.9438714419765777 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A', 'ATP11A-CUL4A|1|fusion', 'ATP11A-CUL4A|2|fusion'] 89285 4376 RELEVQHPAA True NCI_RA007_Epitope_Rep4 1148.59382055536 1148.59272993586 23.182 2 0.04620948484692009 0.0054257688480310855 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 27294 19035 FLYPNVSLL True H1975_Epitope_Rep2 1064.59063266788 1064.5895299358601 79.018 2 0.04620331408824434 0.0054257688480310855 0.9438714419765777 ['ENST00000394434.6_1_5:145551543-145552296:-|nuORF'] 42638 5138 IETNHNLPP True H1975_Epitope_Rep3 1033.5192586327698 1033.5181699358602 24.867 2 0.04620119664368787 0.0054257688480310855 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'ENST00000495356.5_1_X:153052908-153059781:-|nuORF'] 37305 13004 GVVPTIQKV True PC9_epitope_Rep1 939.5753169569098 939.57420993586 54.891 2 0.04618287684115964 0.0054257688480310855 0.9438714419765777 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF', 'ENST00000574439.5_1_15:74472423-74490170:-|nuORF', 'nc|ENSG00000137868|Q9BX79-3|STRA6', 'ENSG00000137868|ENST00000395105|STRA6', 'nc|ENSG00000137868|Q9BX79-6|STRA6', 'nc|ENSG00000137868|Q9BX79-4|STRA6', 'nc|ENSG00000137868|Q9BX79-5|STRA6'] 72513 17433 M[Oxidation]VDGTLLLL True NCI_RA007_Epitope_Rep3 989.5467196310099 989.54562993586 76.489 2 0.04618076280700534 0.0054257688480310855 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 1055 9620 AEAIRILAA True H1975_Epitope_Rep1 926.5549158654999 926.55436496793 41.929 1 0.04615967620227333 0.005448300367168068 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 24658 12701 FASTILHL True H1975_Epitope_Rep3 900.5069030439199 900.50580993586 54.065 2 0.046142745541903854 0.005448300367168068 0.9438714419765777 ['ENSG00000129562|ENST00000250498|DAD1'] 85136 8756 QITQINHGL True PC9_epitope_Rep4 1022.5508931142199 1022.5497899358601 41.188 2 0.04613758348225897 0.005448300367168068 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 77277 13262 NYISGIQTI True NCI_RA007_Epitope_Rep4 1007.52876068731 1007.52817496793 58.146 1 0.04613402111115363 0.005448300367168068 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3'] 62466 13309 LLSLVGSDP True H1975_Epitope_Rep3 899.49639792987 899.4958449679301 56.451 1 0.04613102159841305 0.005448300367168068 0.9438714419765777 ['nc|ENSG00000276850|P13928-3|ANXA8', 'nc|ENSG00000264230|Q5VT79-2|ANXA8L1', 'ENSG00000265190|ENST00000585281|ANXA8', 'ENSG00000264230|ENST00000619162|ANXA8L1'] 31918 13035 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.49187496793 55.224 1 0.046125687378725695 0.005448300367168068 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 88268 11766 QYFPKAPEF True NCI_RA007_Epitope_Rep5 1125.5494961318898 1125.54838993586 51.916 2 0.046124286822753054 0.005448300367168068 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48', 'nc|ENSG00000090686|Q86UV5-3|USP48'] 131119 14105 VVPAALKVV True PC9_epitope_Rep2 894.59023874506 894.58914993586 59.529 2 0.04611353288543929 0.005448300367168068 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 132581 22446 VYPNWAIGL True PC9_epitope_Rep5 1031.5440168286298 1031.54347496793 91.339 1 0.046103457021128155 0.005448300367168068 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 34687 18251 GQLPNLQTV True PC9_epitope_Rep5 968.5290950404801 968.5285449679301 75.218 1 0.04609269297366742 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 32914 23026 GIPDYFDIV True PC9_epitope_Rep2 1037.5069626135698 1037.50637496793 94.062 1 0.046091494730017064 0.005462155068454281 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 1731 10494 AEGRIIWPA True H1975_Epitope_Rep3 1011.5501648382299 1011.54906993586 45.428 2 0.046085061741905346 0.005462155068454281 0.9438714419765777 ['ENST00000457895.6_2_19:19516611-19516803:+|nuORF'] 131711 20641 VWSDVTPLTF True PC9_epitope_Rep6 1163.58627556343 1163.5851699358602 92.13 2 0.04607690064098007 0.005462155068454281 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 37253 14410 GVVGEVTQV True PC9_epitope_Rep2 886.47599683846 886.47488993586 60.695 2 0.046061986213659846 0.005462155068454281 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 72495 15680 MVAPAVASV True PC9_epitope_Rep3 843.4524249429099 843.45132993586 65.456 2 0.0460576179638191 0.005462155068454281 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 139672 22066 YTTDFIYQL True PC9_epitope_Rep2 1162.55464108198 1162.5540749679299 90.348 1 0.046055706351874406 0.005462155068454281 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 70605 19635 M[Oxidation]AAAWPLLL True H1975_Epitope_Rep3 1000.5415746809199 1000.5410749679301 82.253 1 0.046052255747148337 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 120450 18642 VFTYVGALF True NCI_RA007_Epitope_Rep3 1015.5378688190298 1015.5372749679301 81.562 1 0.046030732377412585 0.005462155068454281 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 44906 11278 IQDNKFIEA True PC9_epitope_Rep1 1076.55022440788 1076.54912993586 48.26 2 0.04602666065316388 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 107665 20240 TAISLFYEL True NCI_RA007_Epitope_Rep1 1055.5539128059902 1055.55337496793 82.933 1 0.046014284792985964 0.005462155068454281 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 86626 6263 QREAEQSNVAL True PC9_epitope_Rep2 1243.61567819875 1243.61458993586 29.489 2 0.04600478783872042 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 68176 21171 LTQEAILSLTV True PC9_epitope_Rep1 1186.6809042242598 1186.67980993586 86.267 2 0.04599834662314008 0.005462155068454281 0.9438714419765777 ['ENST00000592937.1_1_19:2477233-2477596:+|nuORF'] 82978 20747 PYCSPPMTF True PC9_epitope_Rep5 1041.42997524617 1041.42947496793 84.862 1 0.04599788925282428 0.005462155068454281 0.9438714419765777 ['ENST00000576921.1_1_16:3072866-3073436:-|nuORF', 'nc|ENSG00000103145|Q9NWW0-2|HCFC1R1', 'ENSG00000103145|ENST00000248089|HCFC1R1'] 41445 20665 IAVNAVLTV True PC9_epitope_Rep5 898.5487678559 898.5482149679301 84.542 1 0.04599697655720875 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 108336 3739 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 19.378 2 0.04598674747903054 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 101669 10944 SPFRVNVGA True PC9_epitope_Rep4 945.5032146458099 945.50210993586 49.865 2 0.045980058822688984 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.N756K|1|0.07|ENSG00000196924|chrX:154364034-154364034|G/T|missense_variant'] 89638 4871 REVDAEYEA True NCI_RA007_Epitope_Rep4 1080.4723680099999 1080.4712699358602 25.184 2 0.04596664301801683 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000149182|Q8N6H7-3|ARFGAP2', 'nc|ENSG00000149182|Q8N6H7-2|ARFGAP2', 'ENSG00000149182|ENST00000524782|ARFGAP2'] 47917 22832 IYVPVSLGF True PC9_epitope_Rep5 993.55351888317 993.55242993586 92.819 2 0.04596419109226819 0.005462155068454281 0.9438714419765777 ['ENSG00000172818|ENST00000335987|OVOL1'] 41134 19832 HYPPVQVLF True PC9_epitope_Rep2 1098.58621599378 1098.5851099358601 81.676 2 0.04595602817712119 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 100144 21523 SLLDPVPEV True PC9_epitope_Rep1 967.52261267771 967.52150993586 87.621 2 0.045950755836421275 0.005462155068454281 0.9438714419765777 ['ENSG00000089154|ENST00000300648|GCN1'] 85280 5316 QKSLSLSPG True NCI_RA007_Epitope_Rep3 915.5025459394699 915.50144993586 27.92 2 0.04593588493903743 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 131519 20851 VVVGDLVEV True PC9_epitope_Rep3 927.5276980581499 927.5271449679301 85.476 1 0.045928036541976025 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 85557 8801 QLLGSAHEV True PC9_epitope_Rep2 952.4977949122001 952.49668993586 39.206 2 0.04592237614320468 0.005462155068454281 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 131515 20941 VVVGDLVEV True PC9_epitope_Rep1 927.5276980581499 927.5271449679301 85.37 1 0.045913397414809494 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 137580 14869 YLSQDTVSV True PC9_epitope_Rep2 1010.49204082542 1010.49094993586 62.456 2 0.04591290813515085 0.005462155068454281 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 118902 5103 VEEPSNPEA True H1975_Epitope_Rep2 970.4243551884199 970.42324993586 24.708 2 0.045911177111126605 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 4144 17442 AHVPTLQVL True PC9_epitope_Rep5 976.5705659296399 976.56946993586 72.09 2 0.045890908297834605 0.005462155068454281 0.9438714419765777 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF', 'ENST00000592624.1_1_19:1242319-1242811:+|nuORF'] 108337 3823 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 19.722 2 0.045887903137281576 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 40220 6282 HRGTGLVL True PC9_epitope_Rep4 851.49773534255 851.49662993586 31.221 2 0.0458849422220611 0.005462155068454281 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 85985 16022 QPHDPLVPLSA True PC9_epitope_Rep1 1172.61897267404 1172.6178699358602 66.442 2 0.0458717222436593 0.005462155068454281 0.9438714419765777 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210', 'ENST00000479519.5_1_3:13393312-13395748:-|nuORF'] 97031 15072 SEWDGIVTV True NCI_RA007_Epitope_Rep3 1004.4814761417199 1004.48036993586 66.768 2 0.045871471022087454 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 3493 10083 AGLQFPVGR True NCI_RA007_Epitope_Rep4 943.5239500903898 943.52284993586 45.631 2 0.04586241554770007 0.005462155068454281 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 38855 11592 HIGDAVVI True PC9_epitope_Rep6 822.4599528515 822.45884993586 55.704 2 0.04584427769535375 0.005462155068454281 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 60247 13450 LIDVGTGYY True H1975_Epitope_Rep1 999.49131254943 999.4907749679301 56.851 1 0.04581343307520103 0.005462155068454281 0.9438714419765777 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 18168 16288 EIPLTLHSV True PC9_epitope_Rep4 1007.56514619603 1007.56404993586 70.608 2 0.045812893487815705 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant', 'BAZ1B|p.E690V|1|0.47|ENSG00000009954|chr7:73477392-73477392|T/A|missense_variant'] 109691 6361 THEQGSVMM True PC9_epitope_Rep5 1018.42120146762 1018.42010993586 29.444 2 0.04578767006849341 0.005462155068454281 0.9438714419765777 ['ENSG00000101347|ENST00000646673|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1'] 8667 19820 AVATDFFTV True PC9_epitope_Rep6 969.48074786573 969.4801949679301 88.896 1 0.04577892345892779 0.005462155068454281 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 117561 10539 VAGGAVYL True H1975_Epitope_Rep3 748.4119400299201 748.41139496793 45.605 1 0.04576263654767322 0.005462155068454281 0.9438714419765777 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 72900 19805 NAVVELVTV True PC9_epitope_Rep4 942.5385970950199 942.5380449679301 84.306 1 0.045744884894738574 0.005462155068454281 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 130875 4389 VVGVGMTK True NCI_RA007_Epitope_Rep3 789.44186025921 789.44076993586 24.039 2 0.0457445762974824 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 5630 19556 APAELLAALPA True PC9_epitope_Rep6 1035.5964463243097 1035.5953499358602 87.886 2 0.045723430317899036 0.005462155068454281 0.9438714419765777 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 106745 17767 SYDPTIENTF True PC9_epitope_Rep6 1185.51898384925 1185.51788993586 80.974 2 0.04571630272295775 0.005462155068454281 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB'] 93766 11193 RTSTGIIGV True PC9_epitope_Rep3 902.5185303567799 902.51742993586 48.058 2 0.04571237647892157 0.005462155068454281 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 7171 22375 ARDEIIWLL True PC9_epitope_Rep1 1127.63389446219 1127.63337496793 90.881 1 0.045708286248676705 0.005462155068454281 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 6902 7230 AQITGTEHL True PC9_epitope_Rep4 968.49270953176 968.49160993586 35.115 2 0.045690749071279076 0.005462155068454281 0.9438714419765777 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 1182 7635 AEDDLNTVA True H1975_Epitope_Rep2 946.42435518842 946.42324993586 34.32 2 0.04568833102553614 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 123092 17466 VHAPPMQLGF True PC9_epitope_Rep4 1095.5535359665098 1095.5524299358601 75.18 2 0.04568753924766641 0.005462155068454281 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 17219 14256 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50708496793 62.739 1 0.04568696501985336 0.005462155068454281 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 24306 15277 FADEGSIFY True H1975_Epitope_Rep2 1047.45492704071 1047.4543749679299 63.921 1 0.04566634013751243 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000107745|Q9BPX6-2|MICU1', 'ENSG00000107745|ENST00000361114|MICU1', 'nc|ENSG00000107745|Q9BPX6-3|MICU1', 'nc|ENSG00000107745|Q9BPX6-6|MICU1'] 76250 17076 NSDLNNLLF True H1975_Epitope_Rep2 1048.5189242796 1048.5178299358602 70.949 2 0.045663986396307296 0.005462155068454281 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 32700 13598 GHSEVVAIL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 60.197 2 0.04565433910164922 0.005462155068454281 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 139657 13781 YTSPVNPAV True PC9_epitope_Rep1 946.47599683846 946.47488993586 57.855 2 0.04564727988788964 0.005462155068454281 0.9438714419765777 ['ENSG00000134825|ENST00000537328|TMEM258'] 101296 22510 SLYANIDIL True PC9_epitope_Rep5 1020.5491617787198 1020.54806993586 91.588 2 0.0456370994100559 0.005462155068454281 0.9438714419765777 ['ENST00000510102.5_1_6:43481178-43483845:-|nuORF', 'ENST00000460903.2_1_6:43483331-43484545:-|nuORF', 'ENST00000502714.1_1_6:43481208-43483845:-|nuORF', 'ENSG00000137207|ENST00000372422|YIPF3'] 97077 6721 SEYLSQNPRVA True H1975_Epitope_Rep2 1262.62551460646 1262.62440993586 30.766 2 0.045629877863254134 0.005462155068454281 0.9438714419765777 ['ENSG00000168564|ENST00000504169|CDKN2AIP'] 116393 11684 TWFNQPARKI True PC9_epitope_Rep2 1259.6774906096698 1259.67583490379 50.273 3 0.04561240781733567 0.005462155068454281 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 86176 20620 QPSSLLPLA True PC9_epitope_Rep3 924.5280324113199 924.52692993586 84.583 2 0.045600066257056364 0.005462155068454281 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 134359 11186 WSENTSLNY True H1975_Epitope_Rep2 1112.47745339044 1112.47634993586 48.065 2 0.04557878019607841 0.005462155068454281 0.9438714419765777 ['ENSG00000132423|ENST00000254759|COQ3'] 47615 21810 IYPDSFTVL True PC9_epitope_Rep2 1053.53826274185 1053.5371699358602 89.366 2 0.045568711646942504 0.005462155068454281 0.9438714419765777 ['RWDD1-FAM26D|1|fusion', 'ENSG00000111832|ENST00000466444|RWDD1'] 77124 18923 NYASTFTWW True NCI_RA007_Epitope_Rep4 1174.5083595959 1174.5072699358602 81.826 2 0.04556694823520613 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000052802|Q15800-2|MSMO1', 'ENSG00000052802|ENST00000261507|MSMO1'] 105381 15790 SVAAQLTGV True PC9_epitope_Rep3 844.4654321547599 844.46432993586 65.892 2 0.045565637268620486 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 74886 10915 NLQTVNVDEN True PC9_epitope_Rep1 1144.53603089572 1144.5349299358602 46.87 2 0.04556407532611614 0.005462155068454281 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 75900 5985 NRDRTQIAL True PC9_epitope_Rep2 1085.59415490853 1085.59304993586 28.408 2 0.04555443422675608 0.005462155068454281 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 43083 21483 IGLDGIPEV True PC9_epitope_Rep1 911.49639792987 911.4958449679301 87.477 1 0.04555357801818368 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'ENST00000546039.5_1_11:73589845-73611421:+|nuORF'] 53804 13291 KYFLWEEKF True NCI_RA007_Epitope_Rep4 1288.6492101731599 1288.64810993586 58.263 2 0.045543525217369915 0.005462155068454281 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 1094 7613 AEAPPAYTP True H1975_Epitope_Rep2 915.4337976733101 915.43324496793 34.237 1 0.04553460245067536 0.005462155068454281 0.9438714419765777 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 86334 12488 QQITENPQL True PC9_epitope_Rep2 1069.54038800017 1069.53928993586 53.344 2 0.045518656965399036 0.005462155068454281 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'ENST00000533705.5_1_9:86284090-86294929:-|nuORF'] 116937 18252 TYPENWRAF True PC9_epitope_Rep3 1182.5458077337798 1182.54470993586 75.416 2 0.045509933169196194 0.005462155068454281 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 28786 11378 FTDEEVDELYR True NCI_RA007_Epitope_Rep5 1414.6252398229399 1414.62414993586 50.417 2 0.045504014468750194 0.005462155068454281 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 36649 18431 GVLPNIQAV True PC9_epitope_Rep6 909.5283667644899 909.52781496793 83.538 1 0.04550233699456095 0.005462155068454281 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 119671 12882 VESPVWVSA True H1975_Epitope_Rep3 972.4916469025999 972.49109496793 54.775 1 0.04547788902967015 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC', 'nc|ENSG00000054983|P54803-4|GALC', 'ENST00000557520.1_1_14:88425979-88431954:-|nuORF', 'nc|ENSG00000054983|P54803-5|GALC'] 103565 10372 SRDEQGACAVL True PC9_epitope_Rep5 1147.5291716934698 1147.52806993586 44.88 2 0.04546784682071799 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'CAPG|p.I184Rfs*16|1|0.41|ENSG00000042493|chr2:85399247-85399251|CAGGA/-|frameshift_variant'] 127471 8621 VQTAIKSEL True PC9_epitope_Rep2 987.56006081559 987.55896993586 38.524 2 0.045437878194314864 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 79282 6751 PGHLQEGFG True PC9_epitope_Rep6 940.4402800360799 940.43918993586 34.775 2 0.045420963445847326 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 8006 5869 ATDPTIHTV True PC9_epitope_Rep6 953.4818104948899 953.48070993586 30.817 2 0.04541832439301211 0.005462155068454281 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 53807 13267 KYFLWEEKF True NCI_RA007_Epitope_Rep5 1288.6492101731599 1288.64755490379 57.711 3 0.04541700729883286 0.005462155068454281 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 91870 7004 RPNPPPVSV True PC9_epitope_Rep6 961.53451477409 961.53340993586 35.93 2 0.04539498330309968 0.005484892902737718 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 55482 13893 LAVHPSGVAL True PC9_epitope_Rep5 962.5549158654999 962.55380993586 58.459 2 0.04537564177113587 0.005484892902737718 0.9438714419765777 ['ENSG00000187608|ENST00000649529|ISG15'] 120266 16162 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 67.42 2 0.0453750284054959 0.005484892902737718 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 101500 12490 SPAAPVITA True PC9_epitope_Rep1 825.45961849833 825.45852993586 52.911 2 0.04536200988264235 0.005484892902737718 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 1191 8075 AEDDLNTVAA True H1975_Epitope_Rep3 1017.46146897313 1017.46036993586 36.034 2 0.04535962556131908 0.005484892902737718 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 28684 14104 FSTALYGESDL True H1975_Epitope_Rep1 1201.55028397753 1201.54918993586 59.42 2 0.045355727908386934 0.005484892902737718 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 31804 12358 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43606993586 52.62 2 0.04534654807090449 0.005484892902737718 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 27827 20364 FQIPPNAEL True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 83.365 2 0.045346215579025725 0.005490103675777568 0.9438714419765777 ['ENSG00000004478|ENST00000001008|FKBP4', 'ENST00000597277.1_9:43426178-43426727:-|nuORF'] 23004 16518 EVISKLYAV True PC9_epitope_Rep3 1020.5855472874398 1020.58444993586 68.672 2 0.0453301581524744 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 31509 8291 GEESPLETAA True H1975_Epitope_Rep3 1002.45056993626 1002.4499749679301 36.875 1 0.045325624490270125 0.005490103675777568 0.9438714419765777 ['ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 72414 10107 MTEPIDEY True H1975_Epitope_Rep1 996.4110136233999 996.41046496793 43.815 1 0.04532507458029788 0.005490103675777568 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 25206 8884 FEADPPGQVAA True H1975_Epitope_Rep1 1100.51383889916 1100.51274993586 39.084 2 0.04532163148711313 0.005490103675777568 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 16280 13404 EEIITYYPA True H1975_Epitope_Rep2 1097.52809198097 1097.52698993586 56.693 2 0.045307863201275236 0.005490103675777568 0.9438714419765777 ['ENSG00000148334|ENST00000338961|PTGES2', 'ENST00000496594.5_1_9:130885151-130886781:-|nuORF'] 111253 20087 TLGPVPEI True PC9_epitope_Rep5 824.4643695256 824.46382496793 82.314 1 0.045302345310983934 0.005490103675777568 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 106106 3111 SVNGKVLSK True NCI_RA007_Epitope_Rep2 930.5498304850599 930.54872993586 16.72 2 0.045299585827489976 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 29436 16435 FVHDLVLYL True H1975_Epitope_Rep1 1117.6171817688898 1117.6160899358601 68.578 2 0.045284317968155685 0.005490103675777568 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 1704 5626 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 26.678 2 0.045281851602395416 0.005490103675777568 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 32225 17046 GFGFVTYA True NCI_RA007_Epitope_Rep4 860.4068546494799 860.40630496793 73.856 1 0.0452764940119634 0.005490103675777568 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000484852.1_1_3:147884522-147885023:-|nuORF', 'ENST00000426371.2_1_11:74065594-74065891:+|nuORF', 'chr12:54281941-54282052|502|101.78|0.0|23.28|+|ENST00000676842|HNRNPA1,HNRNPA1', 'ENST00000452488.1_1_2:41383770-41384067:+|nuORF', 'chr12:54281945-54282090|502|40.68|0.0|21.96|+|ENST00000550994|HNRNPA1,HNRNPA1', 'ENST00000441603.1_1_11:5593122-5593311:-|nuORF', 'chr12:54281908-54283827|502|76.48|0.0|22.87|+|ENST00000678448|HNRNPA1,HNRNPA1', 'ENST00000560782.2_1_15:54613573-54613741:-|nuORF', 'chr12:54281896-54283827|502|218.97|0.0|24.38|+|ENST00000679273|HNRNPA1,HNRNPA1', 'ENST00000412087.2_1_X:100143133-100143544:-|nuORF'] 46738 12168 IVAPGKGILAA True PC9_epitope_Rep6 1008.6331661861998 1008.63206993586 58.161 2 0.045273622756949516 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 78189 8490 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 38.022 2 0.045273447755662104 0.005490103675777568 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 97030 15060 SEWDGIVTV True NCI_RA007_Epitope_Rep3 1004.4814761417199 1004.48097496793 66.712 1 0.04527060076978974 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 116392 11591 TWFNQPARKI True PC9_epitope_Rep2 1259.6774906096698 1259.67583490379 49.912 3 0.04525915161780699 0.005490103675777568 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 113765 6050 TRDPQFQKL True PC9_epitope_Rep4 1131.6036569630699 1131.6020249037902 30.266 3 0.0452483182223644 0.005490103675777568 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 31983 5698 GETEPPAAP True H1975_Epitope_Rep3 867.3974121645898 867.39686496793 26.948 1 0.04522326360389679 0.005490103675777568 0.9438714419765777 ['ENSG00000177303|ENST00000321617|CASKIN2', 'GRB2-CASKIN2|1|fusion', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2'] 2781 7366 AEVDAAMAA True NCI_RA007_Epitope_Rep4 847.3745685450299 847.3740149679301 34.974 1 0.0452191475244064 0.005490103675777568 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 132888 13588 VYTSVVEEL True NCI_RA007_Epitope_Rep4 1037.5280919809697 1037.52698993586 59.472 2 0.04520673680475517 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 116397 10546 TWFNQPARKI True PC9_epitope_Rep6 1259.6774906096698 1259.67583490379 51.363 3 0.045196850980009765 0.005490103675777568 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 31917 12943 GEQWTPIEP True H1975_Epitope_Rep1 1055.4923751785898 1055.49187496793 54.86 1 0.04519152986158023 0.005490103675777568 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 78382 6334 PAVFPAAR True NCI_RA007_Epitope_Rep3 827.4653725851099 827.46426993586 31.919 2 0.04516780970500184 0.005490103675777568 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 21011 8395 ERAQGVVL True PC9_epitope_Rep1 870.4923156089399 870.49120993586 37.129 2 0.04516534357479426 0.005490103675777568 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 30613 6518 GALALEEK True PC9_epitope_Rep2 829.4545331178899 829.45342993586 30.488 2 0.045145916576234624 0.005490103675777568 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 35161 10509 GSDDGVLAY True H1975_Epitope_Rep1 895.3923267841499 895.39177496793 45.375 1 0.04514037491341001 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 66067 18561 LSNIFVIGK True PC9_epitope_Rep5 989.5909670210499 989.58986993586 76.42 2 0.045123814182256326 0.005490103675777568 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 124267 14939 VLDDNRLLT True PC9_epitope_Rep2 1057.57677350889 1057.57566993586 62.722 2 0.04510160819029868 0.005490103675777568 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 38694 9106 HHSGNTYFL True PC9_epitope_Rep2 1074.48829285766 1074.4871899358602 40.368 2 0.04510009622420672 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 7939 19970 ATDFGEALV True PC9_epitope_Rep5 921.4443623570098 921.44326993586 81.866 2 0.04509830066195671 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 28707 18105 FSVDDVQTV True PC9_epitope_Rep4 1008.4763907612801 1008.47528993586 77.706 2 0.04509586208748511 0.005490103675777568 0.9438714419765777 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 109497 6911 THAAALSV True PC9_epitope_Rep1 768.41300265908 768.41190993586 31.39 2 0.04509227188733615 0.005490103675777568 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 105653 4279 SVFQQGMKNK True NCI_RA007_Epitope_Rep4 1165.5913780272097 1165.59028993586 22.793 2 0.04509084858561292 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000479960.1_1_1:116943772-116944278:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3'] 113711 11926 TRDETNYGIP True PC9_epitope_Rep3 1164.5411162761598 1164.54000993586 50.893 2 0.04508123943859706 0.005490103675777568 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 13889 6673 DRDPASGTAL True PC9_epitope_Rep4 1001.47778774361 1001.47668993586 32.843 2 0.045077050026668036 0.005490103675777568 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 100494 13612 SLPKKLALL True PC9_epitope_Rep2 981.6586526580498 981.65754993586 57.65 2 0.04506839293773273 0.005490103675777568 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 38871 18666 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58057496793 76.589 1 0.04506449948273315 0.005490103675777568 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 94774 13939 RYLPTGSFPF True NCI_RA007_Epitope_Rep3 1183.6025943339098 1183.6014899358602 62.14 2 0.04506154566456448 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 71024 13157 MESPFITSP True H1975_Epitope_Rep1 1007.46338354943 1007.46287496793 55.701 1 0.045061501993507294 0.005490103675777568 0.9438714419765777 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 62 12768 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44794993586 54.215 2 0.04503969280134633 0.005490103675777568 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 116807 14145 TYLSIIHSL True NCI_RA007_Epitope_Rep3 1045.58079626017 1045.5796899358602 62.925 2 0.04501868822511057 0.005490103675777568 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 46513 8230 ITPQTIHGV True PC9_epitope_Rep6 964.5341804209198 964.53308993586 41.24 2 0.04501098916015127 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 34585 20083 GQGEVLVYV True PC9_epitope_Rep3 962.5072969667398 962.5067449679301 82.501 1 0.044995356519844744 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 4091 10383 AHSPASLSF True PC9_epitope_Rep6 915.44503106335 915.44392993586 50.664 2 0.044967765451595976 0.005490103675777568 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 132000 20556 VYGPLPQSF True PC9_epitope_Rep1 1006.5123823471798 1006.51187496793 83.881 1 0.044964702942625875 0.005490103675777568 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 71070 5869 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 27.56 2 0.044964626320581916 0.005490103675777568 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 83071 14552 PYMAKFVVF True NCI_RA007_Epitope_Rep3 1100.5728744287599 1100.5717699358602 64.556 2 0.04495429366882258 0.005490103675777568 0.9438714419765777 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant', 'CAMK2D-ANK2|1|fusion', 'CAMK2D-ANK2|2|fusion', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3'] 109902 4227 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 22.633 2 0.04495370445484967 0.005490103675777568 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 43459 6194 IHSSSTVL True PC9_epitope_Rep5 842.44978209062 842.44868993586 28.809 2 0.04494725887851332 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 70526 18458 LYTGTVSSF True PC9_epitope_Rep1 973.47566248529 973.47511496793 75.79 1 0.04494561363390727 0.005490103675777568 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 1256 5356 AEDPGPAVA True H1975_Epitope_Rep2 825.38684748089 825.3862949679301 25.647 1 0.0449365713250169 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000123146|P48960-2|ADGRE5', 'nc|ENSG00000123146|P48960-3|ADGRE5', 'ENSG00000123146|ENST00000242786|ADGRE5'] 61576 19922 LLGPPPVGV True PC9_epitope_Rep1 847.51673945163 847.51564993586 81.448 2 0.04493163329791722 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 54230 21952 KYPENFFLL True PC9_epitope_Rep1 1169.61209638845 1169.61157496793 89.257 1 0.044920835328972876 0.005490103675777568 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 6511 11362 APTSVLSQSGA True PC9_epitope_Rep5 1016.5138388991599 1016.51274993586 48.7 2 0.04491410727668216 0.005490103675777568 0.9438714419765777 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2'] 4734 17207 ALDVVNLVY True H1975_Epitope_Rep2 1004.55424715916 1004.55314993586 71.477 2 0.044907709126881135 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 90852 11173 RKVYSILSL True NCI_RA007_Epitope_Rep4 1077.65462990677 1077.6535299358602 49.85 2 0.04490318295146965 0.005490103675777568 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 39366 13135 HLVDEPQNLIK True PC9_epitope_Rep1 1304.7088503076 1304.7077499358602 55.392 2 0.04490199048777475 0.005490103675777568 0.9438714419765777 ['CON__P02769'] 125994 9335 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.49088993586 43.514 2 0.044900237616121136 0.005490103675777568 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 5629 20707 APAELLAALPA True PC9_epitope_Rep4 1035.5964463243097 1035.5953499358602 87.811 2 0.04488569983027516 0.005490103675777568 0.9438714419765777 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 45973 5602 ISSSSFSR True PC9_epitope_Rep3 869.42429561877 869.42318993586 26.625 2 0.04488315846926631 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 35377 16387 GTASGFYTV True PC9_epitope_Rep5 901.4181476091701 901.41704993586 68.031 2 0.044882677835223685 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 103166 17064 SQPDLLHQL True PC9_epitope_Rep5 1049.55055876105 1049.54946993586 70.655 2 0.0448774288319872 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000497100.5_1_X:53227940-53240837:-|nuORF', 'ENST00000465402.1_1_X:53230656-53239709:-|nuORF', 'ENST00000492117.1_1_Y:21877982-21883284:-|nuORF', 'ENST00000544777.1_1_12:442481-443474:-|nuORF', 'ENSG00000117139|ENST00000367265|KDM5B', 'nc|ENSG00000117139|Q9UGL1-2|KDM5B', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C', 'ENSG00000073614|ENST00000399788|KDM5A', 'nc|ENSG00000073614|P29375-2|KDM5A'] 64060 15766 LQDQNTYTL True PC9_epitope_Rep2 1094.52440358286 1094.5233099358602 65.909 2 0.044876652641523546 0.005490103675777568 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 25350 11968 FEGGVVIAA True H1975_Epitope_Rep3 861.4596184983299 861.4590749679301 51.193 1 0.04487488441490379 0.005490103675777568 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 95207 13624 SAAMPGASL True PC9_epitope_Rep5 803.38473930591 803.3841949679301 57.427 1 0.04487391082129979 0.005490103675777568 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 115838 20209 TVMPEDLVEA True PC9_epitope_Rep1 1102.5216267015398 1102.5205299358602 82.563 2 0.044869502993799305 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118788237-118827866:+|nuORF'] 68690 14166 LVDDNYFY True H1975_Epitope_Rep2 1047.45492704071 1047.45382993586 59.643 2 0.04484590028232386 0.005490103675777568 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 116817 16142 TYLTSIPSL True NCI_RA007_Epitope_Rep5 993.53826274185 993.53716993586 68.825 2 0.04482439821573486 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L'] 120795 16708 VGDAIPAVEVF True H1975_Epitope_Rep1 1115.58627556343 1115.5857749679299 69.663 1 0.044775656950114366 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5'] 101667 11541 SPFRVNVGA True PC9_epitope_Rep2 945.5032146458099 945.50210993586 49.718 2 0.044775031666625865 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.N756K|1|0.07|ENSG00000196924|chrX:154364034-154364034|G/T|missense_variant'] 54240 20693 KYPENFFLL True PC9_epitope_Rep4 1169.61209638845 1169.61157496793 87.757 1 0.04476429615986063 0.005490103675777568 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 102344 5186 SPVFTSRSA True PC9_epitope_Rep6 950.48214484806 950.48104993586 27.697 2 0.044760797401665504 0.005490103675777568 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 1342 11956 AEEDPPWAP True H1975_Epitope_Rep1 1010.4345259492999 1010.43397496793 50.993 1 0.04473646867013142 0.005490103675777568 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 76270 11443 NSDNNTIFV True H1975_Epitope_Rep3 1022.46688870674 1022.46637496793 49.134 1 0.04473250629907669 0.005490103675777568 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 1258 7577 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 34.097 2 0.04472478730556504 0.005490103675777568 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 2786 12947 AEVDDILAA True H1975_Epitope_Rep3 915.4549270407099 915.4543749679301 55.031 1 0.044718490873300175 0.005490103675777568 0.9438714419765777 ['ENSG00000132330|ENST00000254663|SCLY', 'ENST00000482031.5_1_2:238973007-238991399:+|nuORF', 'nc|ENSG00000132330|Q96I15-2|SCLY'] 140145 11126 YVSGELEHV True PC9_epitope_Rep3 1031.4923751785898 1031.4912699358601 47.794 2 0.044698692596522996 0.005490103675777568 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 34981 9680 GRADGYVL True PC9_epitope_Rep2 849.43446637965 849.43336993586 42.574 2 0.044692870483402786 0.005490103675777568 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 57532 15902 LEKSFYQF True PC9_epitope_Rep4 1060.5229470308798 1060.52184993586 69.096 2 0.04467329971594422 0.005490103675777568 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 107224 19883 SYPKIIEEF True PC9_epitope_Rep5 1124.57537652656 1124.57426993586 81.532 2 0.044658803241469966 0.005490103675777568 0.9438714419765777 ['ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'nc|ENSG00000144554|Q9BXW9-4|FANCD2'] 17315 11438 EHDPQYAVI True PC9_epitope_Rep4 1070.50327421546 1070.5021699358601 51.766 2 0.044656588532926006 0.005490103675777568 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 43413 18727 IHSEPLGVVL True PC9_epitope_Rep3 1062.60734536118 1062.6062499358602 77.257 2 0.04465291626457601 0.005490103675777568 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 4479 7010 AKHLTPVTL True NCI_RA007_Epitope_Rep4 978.58621599378 978.58510993586 33.591 2 0.0446484036722767 0.005490103675777568 0.9438714419765777 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000472059.5_1_17:19558694-19578882:+|nuORF', 'ENST00000476965.5_1_17:19559657-19578882:+|nuORF', 'nc|ENSG00000006534|P43353-2|ALDH3B1', 'ENSG00000006534|ENST00000342456|ALDH3B1', 'ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 76936 16874 NVPDSFNEV True PC9_epitope_Rep1 1019.45598966987 1019.4554749679301 69.729 1 0.04464497512972628 0.005490103675777568 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 41097 17112 HYMPPPYASL True PC9_epitope_Rep1 1174.5481162328997 1174.5470099358602 70.647 2 0.04464407285873957 0.005490103675777568 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 2435 11170 AEQLSLVQA True H1975_Epitope_Rep2 957.5131106231698 957.51200993586 48.002 2 0.04464218949761249 0.005490103675777568 0.9438714419765777 ['FKBP15|p.G1133Vfs*45|2|0.29|ENSG00000119321|chr9:113169311-113169311|C/-|frameshift_variant', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'ENSG00000119321|ENST00000238256|FKBP15'] 23645 14399 EYGKFFVTL True NCI_RA007_Epitope_Rep3 1102.5698972233 1102.5688099358601 63.955 2 0.04464108265350581 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'ENST00000575656.5_1_16:24960717-24971282:-|nuORF'] 95283 21811 SADTTILFV True PC9_epitope_Rep5 965.50696261357 965.50641496793 88.928 1 0.04463877166656158 0.005490103675777568 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 53935 4713 KYISKPENL True NCI_RA007_Epitope_Rep5 1090.60225998074 1090.60116993586 24.813 2 0.04462207115246231 0.005490103675777568 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 114168 6903 TRSTFSTNY True PC9_epitope_Rep4 1075.49343780775 1075.4923499358601 33.777 2 0.04462080976884792 0.005490103675777568 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 53834 14898 KYGIVQEFF True NCI_RA007_Epitope_Rep4 1129.58079626017 1129.5796899358602 64.768 2 0.04461938305619642 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000149639|O94964-1|MTCL2', 'ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-3|MTCL2'] 27813 18364 FQGVEFHYV True PC9_epitope_Rep2 1124.5290950404801 1124.5279899358602 75.966 2 0.04461786425685835 0.005490103675777568 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 96842 11935 SESPITVEV True H1975_Epitope_Rep2 959.48114178855 959.4805949679301 50.986 1 0.04461699403545162 0.005490103675777568 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 1715 11598 AEGPVAVVV True H1975_Epitope_Rep2 839.4752685624699 839.47472496793 49.678 1 0.04461530001779679 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 95234 14040 SADDTYLQL True NCI_RA007_Epitope_Rep5 1024.47130538084 1024.47020993586 60.696 2 0.04459409118305994 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7'] 70610 20730 MAAAWPLLL True H1975_Epitope_Rep3 984.5466596809199 984.54556993586 86.62 2 0.04458545378048562 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 113801 18394 TRDSTFVFM True PC9_epitope_Rep4 1102.5117307241799 1102.5106299358602 78.817 2 0.04458361757571312 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-2|FBXO11'] 70117 20120 LYIVHPTMF True PC9_epitope_Rep2 1119.57868808519 1119.57758993586 82.8 2 0.04456668066386144 0.005490103675777568 0.9438714419765777 ['ENSG00000175220|ENST00000311956|ARHGAP1'] 103397 15044 SQWSLQHEI True PC9_epitope_Rep2 1126.54072235334 1126.5396299358601 63.124 2 0.04456363805423136 0.005490103675777568 0.9438714419765777 ['ENSG00000085415|ENST00000399892|SEH1L', 'nc|ENSG00000085415|Q96EE3|SEH1L'] 115324 12969 TVDSYVISY True H1975_Epitope_Rep2 1045.49679185269 1045.49627496793 55.0 1 0.04456150255883597 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 4059 7852 AHQQSIPAV True PC9_epitope_Rep5 949.4981292653698 949.49702993586 35.145 2 0.04454509689661304 0.005490103675777568 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 88996 3810 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 19.748 2 0.044544761516721244 0.005490103675777568 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 96465 8158 SEITDTVAA True H1975_Epitope_Rep3 905.43419159613 905.43308993586 36.359 2 0.044543693485296784 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 87829 21876 QVIQSLIAL True PC9_epitope_Rep2 983.6015317047498 983.60042993586 89.621 2 0.04453855012893222 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000185651|P68036-3|UBE2L3', 'nc|ENSG00000185651|P68036-2|UBE2L3', 'UBE2L3|p.Q116Sfs*10|1|0.33|ENSG00000185651|chr22:21621546-21621546|C/-|frameshift_variant', 'ENSG00000236444|ENST00000635918|UBE2L5', 'ENSG00000185651|ENST00000342192|UBE2L3', 'ENST00000496722.1_1_22:21922618-21975955:+|nuORF'] 66989 21569 LTAEDLFEA True PC9_epitope_Rep5 1007.4811417885498 1007.48057496793 88.005 1 0.044533534713104554 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 26741 14941 FLDGNEMTL True NCI_RA007_Epitope_Rep4 1038.46919720586 1038.46808993586 64.936 2 0.04450312908539272 0.005490103675777568 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 21206 12607 ERFEKTFQL True PC9_epitope_Rep4 1196.6189726740397 1196.61733490379 56.332 3 0.04449868741422842 0.005490103675777568 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 31763 10630 GELLFVHSA True H1975_Epitope_Rep1 971.50763131991 971.50708496793 45.846 1 0.04447848668902456 0.005490103675777568 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 112675 21369 TPFTGPFISV True PC9_epitope_Rep4 1064.55424715916 1064.5531499358601 90.363 2 0.04447641139952561 0.005490103675777568 0.9438714419765777 ['ENSG00000164142|ENST00000435205|FHIP1A'] 87963 11382 QVRDVIIAA True PC9_epitope_Rep2 983.5763795860698 983.5758349679301 49.103 1 0.044442827074647695 0.005490103675777568 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 60527 23516 LIPEYLNFI True PC9_epitope_Rep3 1120.61684741572 1120.61574993586 95.735 2 0.04442696916854725 0.005490103675777568 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 71297 16481 MHAGSLLL True PC9_epitope_Rep3 840.45275929608 840.45166993586 68.531 2 0.044420293083455936 0.005490103675777568 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'ENSG00000196862|ENST00000408999|RGPD4', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 1 6207 AAAAAAAAAAA True PC9_epitope_Rep1 799.41881631551 799.41770993586 28.689 2 0.04441408410489386 0.005490103675777568 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 98557 21939 SILSSLTSV True PC9_epitope_Rep5 905.5069626135701 905.50586993586 89.429 2 0.04440876078531878 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 48675 10951 KELFQTPVC True H1975_Epitope_Rep2 1063.5372171960298 1063.5361099358602 47.154 2 0.044404102588755025 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant'] 96760 5534 SEQPRGPIP True H1975_Epitope_Rep2 979.5086939490698 979.50758993586 26.295 2 0.0443846147643213 0.005490103675777568 0.9438714419765777 ['ENST00000450873.6_2_7:66236975-66240294:+|nuORF'] 6009 8170 APLLQPRAA True PC9_epitope_Rep2 935.5552502186699 935.55414993586 36.781 2 0.04436745388939823 0.005490103675777568 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 103586 13631 SRDGMNIVL True PC9_epitope_Rep6 1003.5120650773499 1003.51096993586 64.2 2 0.04435948835410051 0.005490103675777568 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 40183 9247 HRFPTVAV True PC9_epitope_Rep4 925.5133854066898 925.5122899358599 43.165 2 0.04434814672893232 0.005490103675777568 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 16210 13533 EEFPSFGA True H1975_Epitope_Rep2 882.3759484440199 882.37484993586 57.191 2 0.04434359326299137 0.005490103675777568 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 126738 20307 VPSAVLIVA True PC9_epitope_Rep5 867.5429541994699 867.5424049679301 83.155 1 0.044343208283176686 0.005490103675777568 0.9438714419765777 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000294119.6_1_11:62444064-62444232:-|nuORF'] 1697 5784 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 27.242 2 0.044337670623729626 0.005490103675777568 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 81254 12182 PPPLPPPPP True PC9_epitope_Rep3 907.51673945163 907.51564993586 51.894 2 0.0443201851581561 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000135723|ENST00000258201|FHOD1', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000122574|ENST00000242140|WIPF3', 'ENSG00000090470|ENST00000204549|PDCD7'] 84015 5404 QENTQTPTV True H1975_Epitope_Rep1 1016.47745339044 1016.47634993586 25.843 2 0.044316848604985457 0.005490103675777568 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'nc|ENSG00000228224|Q9BZK3|NACA4P', 'ENST00000419462.1_1_8:102381493-102381775:+|nuORF', 'ENSG00000253506|ENST00000521764|NACA2'] 57850 7555 LEQDHFQVA True H1975_Epitope_Rep2 1085.5141732523298 1085.5130699358601 34.014 2 0.044312507924568145 0.005490103675777568 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 135826 6452 YEQGPDTPVS True H1975_Epitope_Rep1 1091.4771190372699 1091.4760299358602 29.879 2 0.04430589325857447 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 112140 19415 TLVEDFPSA True PC9_epitope_Rep2 977.4705771048499 977.46948993586 80.058 2 0.04430219200066438 0.005490103675777568 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant'] 85757 15944 QLVPALAKV True PC9_epitope_Rep2 937.5960524014899 937.59494993586 66.577 2 0.04428622251934863 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000158161|Q99504-2|EYA3', 'nc|ENSG00000158161|Q99504-4|EYA3', 'nc|ENSG00000158161|Q99504-5|EYA3', 'nc|ENSG00000158161|Q99504-3|EYA3', 'ENSG00000158161|ENST00000373871|EYA3'] 35311 4739 GSSSVILEK True NCI_RA007_Epitope_Rep5 918.5022115863 918.50110993586 24.912 2 0.044269952755659696 0.005490103675777568 0.9438714419765777 ['ENSG00000177409|ENST00000318238|SAMD9L'] 67920 10280 LTLEKHGGI True PC9_epitope_Rep6 966.5498304850598 966.54872993586 50.231 2 0.0442670015086318 0.005490103675777568 0.9438714419765777 ['ENSG00000165688|ENST00000371717|PMPCA', 'ENST00000371720.5_1_9:139305120-139310743:+|nuORF', 'PMPCA|p.D141G|1|0.62|ENSG00000165688|chr9:136412877-136412877|A/G|missense_variant'] 1347 12143 AEEDPPWAP True H1975_Epitope_Rep2 1010.4345259492999 1010.43397496793 51.792 1 0.04422772687309357 0.005490103675777568 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 66987 21530 LTAEDLFEA True PC9_epitope_Rep3 1007.4811417885498 1007.48004993586 88.109 2 0.04422345993463052 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 103668 5364 SRDPSAPRL True PC9_epitope_Rep5 997.5304920228099 997.52938993586 25.647 2 0.04421343396878884 0.005490103675777568 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 33176 6389 GKTVISQSL True NCI_RA007_Epitope_Rep3 931.5338460677499 931.53274993586 32.134 2 0.04421163474475648 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 95427 19409 SALDTITTV True PC9_epitope_Rep1 919.48622716899 919.4856749679301 79.467 1 0.04418411266981522 0.005490103675777568 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 103366 13622 SQVPEVTTV True PC9_epitope_Rep2 958.49712620586 958.49602993586 57.689 2 0.04417310007917849 0.005490103675777568 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 18699 11350 ELDENLEY True H1975_Epitope_Rep1 1023.43967089939 1023.43907496793 48.634 1 0.044158059067577866 0.005490103675777568 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant', 'ENST00000476776.1_1_13:23927912-23929028:-|nuORF'] 96861 8261 SESRFFVSS True H1975_Epitope_Rep1 1044.48762415132 1044.48652993586 36.714 2 0.04415135656215492 0.005490103675777568 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 4148 9805 AHVQNGIAL True PC9_epitope_Rep5 921.5032146458099 921.50210993586 42.682 2 0.04411302801665988 0.005490103675777568 0.9438714419765777 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 57851 7517 LEQDHFQVA True H1975_Epitope_Rep3 1085.5141732523298 1085.5130699358601 33.894 2 0.044102947569941875 0.005490103675777568 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 130744 9863 VVDPNDPQM True PC9_epitope_Rep4 1013.44879611445 1013.44768993586 45.589 2 0.044088603010561944 0.005490103675777568 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 8255 17893 ATINEVVQV True PC9_epitope_Rep5 971.52876068731 971.52766993586 73.843 2 0.04408620864297308 0.005490103675777568 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217', 'ZNF217|p.S275Ifs*4|1|0.32|ENSG00000171940|chr20:53582004-53582005|-/T|frameshift_variant'] 71205 19884 [Acetylation]-M[Oxidation]FLVNSFLK True H1975_Epitope_Rep3 1155.5998181493298 1155.59872993586 83.241 2 0.04408378526078043 0.005490103675777568 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 4121 8159 AHTAGVVL True PC9_epitope_Rep1 766.43373810366 766.43264993586 36.214 2 0.04407552103550432 0.005508993313871362 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 83046 21779 PYLDSFYEY True PC9_epitope_Rep3 1195.5073565363898 1195.50677496793 89.071 1 0.04405746251709348 0.005508993313871362 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 2292 6698 AEPSRGPPLP True H1975_Epitope_Rep3 1019.5399940773498 1019.53888993586 30.718 2 0.04405488077008161 0.005508993313871362 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 31491 12407 GEEMPGLSV True H1975_Epitope_Rep3 917.4164333570099 917.41532993586 52.913 2 0.04405473297957042 0.005508993313871362 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 89209 5251 REILKTYAA True H1975_Epitope_Rep2 1063.6025943339098 1063.6014899358602 25.264 2 0.04403549694932437 0.005508993313871362 0.9438714419765777 ['ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'ENSG00000167333|ENST00000300747|TRIM68', 'nc|ENSG00000167333|Q6AZZ1-2|TRIM68'] 98834 10941 SITSVFITK True NCI_RA007_Epitope_Rep4 994.5698972233 994.5693449679301 48.948 1 0.04401087214052287 0.005508993313871362 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 128374 13454 VSDPVGVLY True H1975_Epitope_Rep3 947.49639792987 947.49530993586 57.024 2 0.04400104859749012 0.005508993313871362 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 85114 16864 QISDTSVVL True PC9_epitope_Rep4 960.51277627 960.51222496793 72.848 1 0.04399000706584205 0.005508993313871362 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 9534 20925 AYAENIALL True PC9_epitope_Rep5 976.5229470308799 976.52239496793 85.545 1 0.043969084431189916 0.005508993313871362 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 58803 8518 LFQEREHVLRL True NCI_RA007_Epitope_Rep5 1438.80448202794 1438.80283490379 39.448 3 0.043966870442268484 0.005508993313871362 0.9438714419765777 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 8814 19502 AVFPHLTVV True PC9_epitope_Rep2 981.5647522732099 981.56364993586 80.397 2 0.04396592159717563 0.005508993313871362 0.9438714419765777 ['ENSG00000134825|ENST00000537328|TMEM258'] 8610 11879 AVAISLPK True PC9_epitope_Rep2 797.50108938749 797.49998993586 51.017 2 0.04396437897113943 0.005508993313871362 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 42570 10983 IESPPAFTA True H1975_Epitope_Rep3 931.46509780159 931.46400993586 47.335 2 0.04396227173974627 0.005508993313871362 0.9438714419765777 ['ENSG00000152382|ENST00000367874|TADA1'] 139953 17022 YVIEDDVNM True PC9_epitope_Rep6 1096.47467650912 1096.47356993586 78.028 2 0.04395643536929254 0.005508993313871362 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 101959 20616 SPLTSIISA True PC9_epitope_Rep3 887.49639792987 887.49530993586 84.568 2 0.04394542361200747 0.005508993313871362 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF'] 70875 7478 MEGPTPVSA True H1975_Epitope_Rep2 887.4058686733099 887.40531496793 33.712 1 0.04393770769716827 0.005508993313871362 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 86627 7033 QREAEQSNVAL True PC9_epitope_Rep3 1243.61567819875 1243.61458993586 32.064 2 0.043927562502925614 0.005508993313871362 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 21099 6415 ERDPHEEIL True PC9_epitope_Rep4 1136.5462016566 1136.5445549037902 31.769 3 0.04392304887523775 0.005508993313871362 0.9438714419765777 ['ENSG00000153140|ENST00000283122|CETN3'] 109607 21561 THDELIQLVL True PC9_epitope_Rep3 1179.6499384491499 1179.6488499358602 88.23 2 0.04390461547626763 0.005508993313871362 0.9438714419765777 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1', 'ENST00000522774.1_1_8:37720415-37728147:-|nuORF', 'nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1'] 32445 13643 GGHGPSFPL True PC9_epitope_Rep1 867.42390169595 867.42280993586 57.334 2 0.04389403721947082 0.005508993313871362 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 11847 9843 DHMVSPTAV True PC9_epitope_Rep5 955.44331681119 955.44220993586 42.83 2 0.04386270569291145 0.005508993313871362 0.9438714419765777 ['ENST00000440593.3_1_19:13255325-13260573:-|nuORF', 'ENSG00000104915|ENST00000587230|STX10'] 23937 13405 EYNNNFHVL True PC9_epitope_Rep6 1148.5250722892001 1148.5239699358601 63.237 2 0.04386243090971754 0.005508993313871362 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 11499 21346 DGFLSELTQQL True NCI_RA007_Epitope_Rep2 1249.6190322436898 1249.6184749679298 88.325 1 0.043852645966648625 0.005508993313871362 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 21016 8402 ERAQGVVL True PC9_epitope_Rep5 870.4923156089399 870.49120993586 37.261 2 0.04385260363158039 0.005508993313871362 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 11816 10781 DHLPNAAL True PC9_epitope_Rep2 849.43446637965 849.43336993586 46.787 2 0.04385192589890875 0.005508993313871362 0.9438714419765777 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 56876 12122 LEDLPTVEA True H1975_Epitope_Rep2 985.49679185269 985.49568993586 51.711 2 0.043849656599167904 0.005508993313871362 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 8829 19765 AVFPSIVG True PC9_epitope_Rep4 788.4432401582 788.44269496793 84.15 1 0.043847183491819576 0.005508993313871362 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 2894 11006 AEYSNTWTP True NCI_RA007_Epitope_Rep5 1067.45598966987 1067.4548899358601 48.969 2 0.043846776664317494 0.005508993313871362 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 32109 6698 GEYGRTVVP True NCI_RA007_Epitope_Rep4 976.4977949121999 976.49668993586 32.387 2 0.04384629273816997 0.005508993313871362 0.9438714419765777 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant'] 102832 11393 SQFPGTQRL True PC9_epitope_Rep5 1032.53524305008 1032.5341499358601 48.821 2 0.04379951956859769 0.005508993313871362 0.9438714419765777 ['ENSG00000132330|ENST00000254663|SCLY', 'ENST00000463433.1_1_2:238999874-239004239:+|nuORF', 'ENST00000480357.5_1_2:239002940-239006993:+|nuORF'] 31335 11433 GEAIPALAA True H1975_Epitope_Rep3 811.44396843419 811.44341496793 49.096 1 0.04376358384313794 0.005508993313871362 0.9438714419765777 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 17475 11345 EHGPENIVM True PC9_epitope_Rep1 1024.46478053176 1024.4636899358602 48.517 2 0.04376100300564706 0.005508993313871362 0.9438714419765777 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 489 6566 AAPAEEPAAAA True PC9_epitope_Rep1 967.4610750503098 967.45996993586 30.061 2 0.04375629801366207 0.005508993313871362 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 3425 9740 AGLAKSIGV True PC9_epitope_Rep2 814.4912529797799 814.49014993586 42.805 2 0.04375154129115645 0.005508993313871362 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|250|16.96|0.18|6.55|+|ENST00000602997|AKR1C3,AKR1C3', 'ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|317|31.41|0.67|5.55|+|ENST00000380859|AKR1C1,AKR1C1', 'chr10:4963893-4965914|317|27.99|0.97|4.85|+|ENST00000380859|AKR1C1,AKR1C1'] 85198 4280 QKFDQKQEL True NCI_RA007_Epitope_Rep4 1162.5982372294595 1162.5965849037902 22.796 3 0.0437514698364463 0.005508993313871362 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF'] 29270 16151 FVDGSAIQV True PC9_epitope_Rep6 934.47599683846 934.47488993586 74.475 2 0.04374236960576761 0.005508993313871362 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 132723 20903 VYSGGVYLF True PC9_epitope_Rep4 1003.5014833103099 1003.50097496793 88.563 1 0.043727476823728455 0.00553019249776439 0.9438714419765777 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 37666 14668 HAGVISVL True PC9_epitope_Rep5 794.46503823194 794.46448496793 61.423 1 0.043727339432840004 0.00553019249776439 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 36464 23305 GVISGLFEL True PC9_epitope_Rep3 933.5171333744499 933.51658496793 94.923 1 0.04369733287003759 0.00553019249776439 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 25520 7554 FEQEMATAA True NCI_RA007_Epitope_Rep4 996.4222470134398 996.42114993586 35.704 2 0.04369405681785656 0.00553019249776439 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 53539 15006 KVPEWVDTV True PC9_epitope_Rep6 1071.5600608155898 1071.5589699358602 69.744 2 0.04367210462712661 0.00553019249776439 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 26697 14819 FLDDSTALY True H1975_Epitope_Rep2 1043.48114178855 1043.48057496793 62.158 1 0.0436640365484384 0.00553019249776439 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2'] 52771 5350 KQQAPPPPP True NCI_RA007_Epitope_Rep4 958.5236157372198 958.52250993586 27.144 2 0.04364173791996381 0.00553019249776439 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant'] 5627 21411 APAELLAALPA True PC9_epitope_Rep2 1035.5964463243097 1035.5953499358602 87.828 2 0.043636942227392526 0.00553019249776439 0.9438714419765777 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 35541 18001 GTIGLIHAI True PC9_epitope_Rep5 893.53345214493 893.53234993586 74.258 2 0.04362310686934478 0.00553019249776439 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 132921 22197 VYTVVDEMF True PC9_epitope_Rep1 1101.5052483614097 1101.50467496793 90.201 1 0.043603259306653985 0.00553019249776439 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 60250 13355 LIDVGTGYY True H1975_Epitope_Rep3 999.49131254943 999.4907749679301 56.635 1 0.04359599197277278 0.00553019249776439 0.9438714419765777 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 138134 9210 YQLDQDHNV True PC9_epitope_Rep1 1130.49925146418 1130.49814993586 40.276 2 0.043593756433046534 0.00553019249776439 0.9438714419765777 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'RSF1|p.K386Nfs*6|1|0.19|ENSG00000048649|chr11:77702071-77702071|T/-|frameshift_variant', 'ENST00000534794.1_1_11:77413524-77475723:-|nuORF'] 75549 14585 NQLKYLTRL True PC9_epitope_Rep5 1147.67134260007 1147.66969490379 61.102 3 0.04358446174153176 0.00553019249776439 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 85947 20308 QPASFAVSL True PC9_epitope_Rep1 918.4810822188999 918.47998993586 82.943 2 0.04358203129862067 0.00553019249776439 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.G2359V|1|0.44|ENSG00000196924|chrX:154350989-154350989|C/A|missense_variant', 'ENST00000490936.5_1_X:153578959-153579424:-|nuORF'] 32617 14260 GHFDGVQDL True PC9_epitope_Rep1 986.4457593393399 986.44466993586 59.675 2 0.04354315161968879 0.00553019249776439 0.9438714419765777 ['nc|ENSG00000134759|Q6IA86-4|ELP2', 'nc|ENSG00000134759|Q6IA86-2|ELP2', 'nc|ENSG00000134759|Q6IA86-3|ELP2', 'nc|ENSG00000134759|Q6IA86-5|ELP2', 'ENSG00000134759|ENST00000358232|ELP2', 'nc|ENSG00000134759|Q6IA86-6|ELP2', 'nc|ENSG00000134759|Q6IA86-7|ELP2'] 11757 18633 DHIGALLAV True PC9_epitope_Rep4 907.51271670035 907.51160993586 79.75 2 0.04354153705555319 0.00553019249776439 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3', 'ENST00000515601.6_1_5:465213-467010:+|nuORF'] 96019 8281 SEALIREVA True H1975_Epitope_Rep2 986.53965972418 986.53856993586 36.803 2 0.043535642335314824 0.00553019249776439 0.9438714419765777 ['nc|ENSG00000123992|Q9ULA0-2|DNPEP', 'ENSG00000123992|ENST00000273075|DNPEP'] 113484 10044 TQSEKQLVL True PC9_epitope_Rep3 1044.58152453616 1044.5804299358601 43.59 2 0.0435321321701206 0.00553019249776439 0.9438714419765777 ['ENSG00000128567|ENST00000378555|PODXL', 'nc|ENSG00000128567|O00592-2|PODXL', 'ENST00000446198.5_1_7:131189072-131193853:-|nuORF'] 84855 7952 QHQETINTL True PC9_epitope_Rep3 1082.5356369729 1082.53452993586 35.566 2 0.043507532680573884 0.005552026725009998 0.9438714419765777 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 47613 16696 IYPDSFTVL True NCI_RA007_Epitope_Rep4 1053.53826274185 1053.5371699358602 72.402 2 0.04349751706204592 0.005552026725009998 0.9438714419765777 ['RWDD1-FAM26D|1|fusion', 'ENSG00000111832|ENST00000466444|RWDD1'] 14968 21020 DYSDIVTTL True PC9_epitope_Rep4 1025.49170647225 1025.4906099358602 89.015 2 0.04348857607025376 0.005552026725009998 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF', 'RAD21-EIF3H|4|fusion'] 2633 9740 AESPSWTP True H1975_Epitope_Rep2 873.38684748089 873.3862949679301 42.451 1 0.0434784612964738 0.005552026725009998 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 120445 11370 VFTSRSAAF True PC9_epitope_Rep5 984.5028802926398 984.50178993586 48.731 2 0.04347675266931382 0.005552026725009998 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 1692 5265 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 25.32 2 0.04347469301633775 0.005552026725009998 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 67028 19455 LTAPALALA True PC9_epitope_Rep4 839.5116540711899 839.51110496793 82.949 1 0.043451261447594564 0.005552026725009998 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 126050 11546 VPAPSPLSA True PC9_epitope_Rep6 837.45961849833 837.45852993586 55.511 2 0.043449155081766194 0.005552026725009998 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 102218 12616 SPSPPSVAV True PC9_epitope_Rep5 839.4388830537499 839.43778993586 53.53 2 0.04344201020556229 0.005552026725009998 0.9438714419765777 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'COP1|p.T329Qfs*25|1|0.31|ENSG00000143207|chr1:176116666-176116666|G/-|frameshift_variant', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 95989 8519 SEAEKVYIV True H1975_Epitope_Rep2 1036.5440763982797 1036.54357496793 37.723 1 0.043438618620076065 0.005552026725009998 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7'] 2197 11510 AENNWIEEA True H1975_Epitope_Rep1 1074.4618033263 1074.4607099358602 49.259 2 0.04343211007418775 0.005552026725009998 0.9438714419765777 ['ENSG00000119661|ENST00000553645|DNAL1', 'nc|ENSG00000119661|Q4LDG9-3|DNAL1', 'nc|ENSG00000119661|Q4LDG9-2|DNAL1'] 88988 3222 REDPDSVPP True H1975_Epitope_Rep3 1010.46688870674 1010.46578993586 17.034 2 0.043424796576029066 0.005552026725009998 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 2493 14872 AEQPWPPLPA True H1975_Epitope_Rep2 1104.56039516876 1104.55928993586 62.357 2 0.043407189156254515 0.005552026725009998 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 92 14896 AAAPVVPAV True PC9_epitope_Rep2 793.4697892592098 793.46868993586 62.563 2 0.04339080054398677 0.005566385607252742 0.9438714419765777 ['ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 118101 9718 VATVSLPR True PC9_epitope_Rep5 841.5021520166499 841.50104993586 42.348 2 0.04338859921978459 0.005566385607252742 0.9438714419765777 ['CON__P00761'] 26694 14721 FLDDSTALY True H1975_Epitope_Rep1 1043.48114178855 1043.48057496793 61.845 1 0.043384835061171766 0.005566385607252742 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2'] 120324 14908 VFPEKGYSF True PC9_epitope_Rep4 1072.5229470308798 1072.52184993586 65.286 2 0.04337698348432162 0.005566385607252742 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 1260 7591 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 34.151 1 0.04336979634728172 0.005566385607252742 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 33779 6022 GLSQSALPYRR True NCI_RA007_Epitope_Rep5 1246.6782188856598 1246.6765649037902 29.847 3 0.0433664756683125 0.005566385607252742 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000534329.1_1_11:17098694-17099257:-|nuORF', 'ENST00000528074.1_1_11:17098819-17099188:-|nuORF'] 75202 14605 NPAAGSVILL True H1975_Epitope_Rep1 953.55458151233 953.5540349679301 61.386 1 0.04335456388848178 0.005566385607252742 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1'] 1667 9031 AEGGMTAVV True H1975_Epitope_Rep3 833.3953039896099 833.39475496793 39.733 1 0.0433396868467104 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1'] 105094 2638 STLEPVEK True NCI_RA007_Epitope_Rep5 901.47566248529 901.47456993586 14.834 2 0.0433372805359364 0.005566385607252742 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.L323P|1|0.12|ENSG00000173110|chr1:161525626-161525626|T/C|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 89591 5697 RESLASPVA True H1975_Epitope_Rep2 928.4977949121999 928.49668993586 26.91 2 0.04331778223209669 0.005566385607252742 0.9438714419765777 ['ENST00000373622.9_1_20:35807565-35812612:+|nuORF'] 117798 8105 VAMEAVAA True H1975_Epitope_Rep2 760.3789256494799 760.3783749679301 36.125 1 0.0433165174072089 0.005566385607252742 0.9438714419765777 ['GLI2|p.Q1236Sfs*2|1|0.25|ENSG00000074047|chr2:120989667-120989667|C/-|frameshift_variant', 'ENSG00000074047|ENST00000361492|GLI2', 'nc|ENSG00000074047|P10070|GLI2', 'nc|ENSG00000074047|P10070-4|GLI2', 'nc|ENSG00000074047|P10070-3|GLI2', 'ENST00000452692.5_1_2:121728002-121748192:+|nuORF', 'ENST00000438299.5_1_2:121728002-121748192:+|nuORF', 'nc|ENSG00000074047|P10070-2|GLI2', 'nc|ENSG00000074047|P10070-1|GLI2'] 89207 6983 REIKFTVQA True H1975_Epitope_Rep1 1090.61349337078 1090.6123899358602 31.9 2 0.04330018477097773 0.005566385607252742 0.9438714419765777 ['ENSG00000109929|ENST00000264027|SC5D', 'ENST00000534455.5_1_11:121174081-121175207:+|nuORF', 'ENST00000531140.1_1_11:121174081-121177378:+|nuORF', 'ENST00000524683.5_1_11:121175009-121175207:+|nuORF'] 38153 6549 HERAIDFSP True NCI_RA007_Epitope_Rep5 1070.5145076055 1070.5134099358602 31.852 2 0.04329657239310296 0.005566385607252742 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 108963 7706 TEVAPPPPP True H1975_Epitope_Rep1 903.4701831820299 903.46963496793 34.603 1 0.04328839145266551 0.005566385607252742 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 37325 21636 GVVTDLITV True PC9_epitope_Rep5 915.52769805815 915.52660993586 88.265 2 0.0432830429290565 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3'] 43974 16749 ILGGPGTVQGV True PC9_epitope_Rep5 996.56039516876 996.55928993586 69.43 2 0.04327086113508001 0.005566385607252742 0.9438714419765777 ['ENST00000526066.5_1_11:66366934-66367108:+|nuORF', 'ENSG00000173992|ENST00000533244|CCS'] 75119 8680 NMVAKVDEV True PC9_epitope_Rep6 1003.5008316873099 1003.49972993586 43.232 2 0.04325233828754593 0.005566385607252742 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF'] 82600 6826 PVKAAQFEPPG True NCI_RA007_Epitope_Rep3 1139.5975089534697 1139.59640993586 33.958 2 0.043236510808640584 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000244682|P31995|FCGR2C', 'nc|ENSG00000143226|P12318-2|FCGR2A', 'ENSG00000143226|ENST00000271450|FCGR2A', 'ENST00000537821.2_1_1:161482968-161571037:+|nuORF', 'ENST00000507374.5_1_1:161564627-161571037:+|nuORF'] 89102 6059 REFDRRFSP True NCI_RA007_Epitope_Rep2 1208.6050539453997 1208.60341490379 28.173 3 0.04321112958600507 0.005566385607252742 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 76002 6728 NRISHGEVL True PC9_epitope_Rep1 1023.5461420869499 1023.54504993586 30.684 2 0.043194745270884315 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 12453 11011 DKNSGVVITV True PC9_epitope_Rep1 1030.56587447202 1030.56476993586 47.242 2 0.043193503433844774 0.005566385607252742 0.9438714419765777 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-1|CDH26'] 45062 10320 IQQGETPGL True PC9_epitope_Rep4 941.4818104948898 941.48070993586 47.387 2 0.04319248697740943 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143', 'ENST00000532305.1_1_11:9546777-9549157:+|nuORF'] 87865 19685 QVLEDFPTI True PC9_epitope_Rep6 1060.54407639828 1060.5429699358601 88.377 2 0.04318814945552398 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 41049 18817 HYILHNSFF True PC9_epitope_Rep5 1176.5716285587998 1176.56998490379 77.392 3 0.04318470138187492 0.005566385607252742 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 115718 8870 TVLERVEGA True PC9_epitope_Rep6 972.5240096600398 972.52290993586 44.055 2 0.043167306592660076 0.005566385607252742 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 115131 20047 TTYPNTYIF True PC9_epitope_Rep4 1118.5284263341398 1118.52732993586 85.247 2 0.04311787458351842 0.005566385607252742 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 139094 10078 YSNKEIFL True H1975_Epitope_Rep1 1012.5229470308799 1012.5223749679301 43.701 1 0.0431132580092058 0.005566385607252742 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 130433 17130 VTVPPGPSL True PC9_epitope_Rep1 865.49091862661 865.49037496793 70.715 1 0.04311040112269236 0.005566385607252742 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 140163 11338 YVTEKVLAA True PC9_epitope_Rep3 992.5542471591598 992.55314993586 48.618 2 0.04308748347297791 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENSG00000136872|ENST00000647789|ALDOB'] 116991 14336 TYPYLQHEI True PC9_epitope_Rep4 1162.5658744720201 1162.56476993586 63.044 2 0.043084758660866786 0.005566385607252742 0.9438714419765777 ['PMEPA1|p.S209Qfs*3|1|0.15|ENSG00000124225|chr20:57652292-57652293|-/G|frameshift_variant', 'nc|ENSG00000124225|Q969W9-3|PMEPA1', 'nc|ENSG00000124225|Q969W9-2|PMEPA1', 'ENSG00000124225|ENST00000341744|PMEPA1'] 107028 18017 SYLPFTEAF True NCI_RA007_Epitope_Rep3 1073.5069626135698 1073.5058699358601 78.949 2 0.043075630268468924 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 97548 20421 SGVEVLVSV True PC9_epitope_Rep5 887.4963979298699 887.4958449679301 83.584 1 0.04307031795515793 0.005566385607252742 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 84114 4959 QEQLKSPPSP True H1975_Epitope_Rep3 1109.57168812845 1109.5705899358602 24.202 2 0.04305323888342398 0.005566385607252742 0.9438714419765777 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12'] 98000 12643 SHSPPLLQV True PC9_epitope_Rep4 976.53418042092 976.53308993586 56.471 2 0.04304081790976707 0.005566385607252742 0.9438714419765777 ['ENSG00000165030|ENST00000297689|NFIL3'] 1729 10418 AEGRIIWPA True H1975_Epitope_Rep2 1011.5501648382299 1011.54906993586 45.086 2 0.04302912897916526 0.005566385607252742 0.9438714419765777 ['ENST00000457895.6_2_19:19516611-19516803:+|nuORF'] 96905 15308 SETILTMVA True H1975_Epitope_Rep2 963.49468367771 963.4941349679301 64.041 1 0.04302633858729708 0.005566385607252742 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 129141 10949 VTDDALVY True H1975_Epitope_Rep2 894.4334633201399 894.4329149679301 47.146 1 0.043021681400004785 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 52679 12827 KQFVQWDEL True NCI_RA007_Epitope_Rep3 1191.5924235730297 1191.5913299358601 57.696 2 0.04300966247775189 0.005566385607252742 0.9438714419765777 ['ENSG00000137100|ENST00000259632|DCTN3', 'ENST00000481438.1_1_9:34613781-34613940:-|nuORF', 'ENST00000479399.5_1_9:34613781-34614146:-|nuORF', 'ENST00000472418.5_1_9:34613781-34614781:-|nuORF', 'nc|ENSG00000137100|O75935-3|DCTN3'] 109765 13766 THISDTSVVL True PC9_epitope_Rep1 1070.56078909158 1070.56027496793 57.795 1 0.04300342612696725 0.005566385607252742 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 40161 18768 HRDYFLQEL True PC9_epitope_Rep5 1219.5985715826298 1219.59746993586 77.202 2 0.04299764965518352 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000240771|Q86VW2-2|ARHGEF25', 'ENSG00000240771|ENST00000286494|ARHGEF25', 'nc|ENSG00000240771|Q86VW2-3|ARHGEF25'] 132471 21969 VYPASKMFPFI True PC9_epitope_Rep1 1298.67331674602 1298.67220993586 89.323 2 0.04298502417933643 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 93972 8970 RVNKAFVNV True PC9_epitope_Rep3 1045.6032630402499 1045.60216993586 39.45 2 0.04298469966958547 0.005566385607252742 0.9438714419765777 ['ENSG00000176731|ENST00000619594|RBIS'] 102646 15175 SQDFPGSNL True PC9_epitope_Rep4 963.42977492203 963.42866993586 66.296 2 0.042981637974732936 0.005566385607252742 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 116717 9691 TYKVISNEF True NCI_RA007_Epitope_Rep5 1099.5549754351498 1099.5538699358601 43.913 2 0.04297477393759674 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 35913 21266 GVAIPLPGV True PC9_epitope_Rep5 821.50108938749 821.5005449679301 86.85 1 0.04297198660646744 0.005566385607252742 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 7031 13869 AQSGTIMAV True PC9_epitope_Rep1 876.43750315476 876.43640993586 58.188 2 0.042958298516836246 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3'] 108220 5916 TEAEDM[Oxidation]ISA True H1975_Epitope_Rep2 981.3960922156899 981.3949899358599 27.742 2 0.042954109447291534 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B'] 68648 17046 LVAPPLPAA True PC9_epitope_Rep6 847.51673945163 847.51564993586 78.125 2 0.04292093909821352 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 15351 18440 EALFQPSFL True H1975_Epitope_Rep1 1050.53859709502 1050.53807496793 76.868 1 0.04291625992731266 0.005566385607252742 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 28760 16682 FTAQVLIL True H1975_Epitope_Rep1 903.5429541994698 903.5424049679301 69.563 1 0.04290807264661468 0.005566385607252742 0.9438714419765777 ['ENST00000447052.1_1_21:24762753-24763314:+|nuORF'] 17620 5974 EHNDLQYAA True PC9_epitope_Rep6 1059.46213767947 1059.46104993586 31.295 2 0.04290396788812858 0.005566385607252742 0.9438714419765777 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 71420 24475 MIPLLLAAL True PC9_epitope_Rep1 953.5983609006099 953.59781496793 98.988 1 0.042891224881913936 0.005566385607252742 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 14459 8965 DTRLQEVAL True NCI_RA007_Epitope_Rep5 1043.56112344475 1043.56002993586 41.141 2 0.04288535232918959 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000185651|P68036-3|UBE2L3'] 130762 9046 VVDSSNTAL True PC9_epitope_Rep1 904.45017601344 904.44906993586 39.647 2 0.042875401424005526 0.005566385607252742 0.9438714419765777 ['ENSG00000167515|ENST00000696289|TRAPPC2L', 'nc|ENSG00000167515|Q9UL33|TRAPPC2L', 'ENST00000565309.1_1_16:88925068-88926212:+|nuORF', 'ENST00000565205.5_1_16:88925858-88927364:+|nuORF'] 281 15768 AAGTVFTTV True PC9_epitope_Rep4 865.4545331178899 865.4539849679301 68.574 1 0.04286744344249449 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 72920 16652 NAYTGIVLL True H1975_Epitope_Rep3 962.54368247546 962.5431349679301 69.569 1 0.04284526586843794 0.005566385607252742 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 47902 21379 IYVISAETF True PC9_epitope_Rep5 1041.53826274185 1041.5371699358602 87.295 2 0.042842923819861566 0.005566385607252742 0.9438714419765777 ['ENSG00000116459|ENST00000369722|ATP5PB'] 106770 18256 SYFSGSHMF True PC9_epitope_Rep3 1061.4276667470501 1061.42656993586 75.431 2 0.0428402675776731 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 123803 11541 VITIMQNPR True PC9_epitope_Rep5 1070.5906497512199 1070.58954993586 49.39 2 0.04283444039575354 0.005566385607252742 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 74985 23615 NLVSFLETV True PC9_epitope_Rep5 1020.54916177872 1020.54806993586 95.814 2 0.04282657937995989 0.005566385607252742 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1'] 39599 11123 HPLLGVSA True PC9_epitope_Rep1 792.4493881678001 792.4488349679301 47.67 1 0.042826487084479815 0.005566385607252742 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 118976 19703 VEFDFIPDV True H1975_Epitope_Rep2 1079.51752729727 1079.5169749679299 81.757 1 0.0428106871302597 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000518968.1_1_8:50652851-50653445:-|nuORF'] 72807 16701 NAIGSASVVTV True PC9_epitope_Rep3 1016.55022440788 1016.54912993586 69.373 2 0.04280378665795028 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF'] 9030 18674 AVIGDVIRV True PC9_epitope_Rep3 940.57056592964 940.56946993586 77.048 2 0.04279895368500258 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 33269 12777 GLAPPQHLIRV True PC9_epitope_Rep4 1199.71387611839 1199.71222490379 57.009 3 0.04279804199394224 0.005566385607252742 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'nc|ENSG00000141510|P04637-9|TP53', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'nc|ENSG00000141510|P04637-8|TP53'] 120446 9316 VFTSRSAAF True PC9_epitope_Rep6 984.5028802926398 984.50178993586 46.001 2 0.04277653294159241 0.005566385607252742 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 84586 7812 QHDPETSVL True PC9_epitope_Rep2 1024.48253877088 1024.4814499358602 35.418 2 0.042764119251164696 0.005566385607252742 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 24264 18889 FAADIISVL True NCI_RA007_Epitope_Rep5 947.53278343859 947.53168993586 79.501 2 0.04276079719503114 0.005566385607252742 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 48955 9644 KEYILVEEA True H1975_Epitope_Rep3 1092.5702911461199 1092.56918993586 42.112 2 0.04275415047756508 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2', 'ENST00000478055.1_1_5:131553347-131562829:-|nuORF'] 109987 10139 THSPYVAQI True PC9_epitope_Rep2 1014.51344497634 1014.51234993586 44.338 2 0.04274711879675441 0.005566385607252742 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1'] 101504 12502 SPAAPVITA True PC9_epitope_Rep3 825.45961849833 825.45852993586 53.115 2 0.042733572036550295 0.00558934736149926 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 118756 6557 VEDPATEEP True H1975_Epitope_Rep3 985.42402083525 985.42347496793 30.182 1 0.04271945661474781 0.00558934736149926 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32', 'nc|ENSG00000008517|P24001-7|IL32'] 67810 21965 LTIDDGIFEV True PC9_epitope_Rep4 1120.56520576568 1120.56467496793 92.702 1 0.042716512362201274 0.00558934736149926 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 103048 21841 SQLDIIIHSL True PC9_epitope_Rep1 1137.63937376545 1137.63826993586 88.822 2 0.042701285087648734 0.00558934736149926 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 10188 5391 C[Carbamidomethyl]C[Carbamidomethyl]TESLVNR True NCI_RA007_Epitope_Rep1 1137.49067856863 1137.48958993586 25.048 2 0.04267246636653847 0.005608090668043269 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 110987 16099 TLDDMISYY True H1975_Epitope_Rep2 1119.4794275363902 1119.47832993586 67.135 2 0.04265312718627253 0.005608090668043269 0.9438714419765777 ['ENSG00000154781|ENST00000383794|CCDC174'] 24596 19385 FAMPYFIQV True NCI_RA007_Epitope_Rep3 1114.55213898418 1114.5510499358602 84.602 2 0.04264998018340283 0.005608090668043269 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 74896 9814 NLQYNISRNT True NCI_RA007_Epitope_Rep1 1221.61019889549 1221.60910993586 42.178 2 0.042631883838258555 0.005608090668043269 0.9438714419765777 ['ENST00000298105.7_1_13:103543811-103548031:+|nuORF', 'nc|ENSG00000250878|A6NDL7|METTL21EP'] 9121 12209 AVLPHVDQV True PC9_epitope_Rep4 976.5341804209198 976.53308993586 54.781 2 0.04263070863666128 0.005608090668043269 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1'] 8873 13784 AVFPSIVGRPR True PC9_epitope_Rep5 1197.69822605425 1197.6971299358602 58.039 2 0.04262952074385244 0.005608090668043269 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 120589 12006 VGAGAPVYL True H1975_Epitope_Rep2 845.46470387877 845.4641549679301 51.263 1 0.04261431687261005 0.005608090668043269 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 95163 18177 SAAFPGASL True PC9_epitope_Rep1 819.41266830591 819.41156993586 74.707 2 0.04260405050979902 0.005608090668043269 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 44503 12254 IPAAIATA True PC9_epitope_Rep1 726.4275900940601 726.4270449679301 51.995 1 0.04259014910672537 0.005608090668043269 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 8349 14937 ATLSKIIQV True PC9_epitope_Rep4 971.6015317047498 971.60042993586 65.396 2 0.042588626704221325 0.005608090668043269 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 1953 6021 AEIPETSNA True H1975_Epitope_Rep2 930.4294405688601 930.42834993586 28.138 2 0.04256949406423512 0.005608090668043269 0.9438714419765777 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 97407 16509 SGFGGITML True H1975_Epitope_Rep3 881.43168949833 881.4311449679301 68.999 1 0.04254891330627914 0.005608090668043269 0.9438714419765777 ['nc|ENSG00000141219|Q9BSJ5-2|MTNAP1', 'nc|ENSG00000141219|Q9BSJ5-3|MTNAP1', 'ENSG00000141219|ENST00000535032|C17orf80'] 138211 6746 YQSKYEEL True NCI_RA007_Epitope_Rep5 1058.49204082542 1058.49094993586 32.622 2 0.042538782275032494 0.005608090668043269 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 71298 14349 MHAGSLLL True PC9_epitope_Rep4 840.45275929608 840.45166993586 63.1 2 0.04253721482463444 0.005608090668043269 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'ENSG00000196862|ENST00000408999|RGPD4', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 88958 3571 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 18.073 2 0.04252337182857864 0.005608090668043269 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 99582 8533 SLFGSPVAK True NCI_RA007_Epitope_Rep5 904.50181766348 904.50072993586 39.506 2 0.04252093532169005 0.005608090668043269 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 45846 11335 ISQFLQAA True H1975_Epitope_Rep2 876.4705175351999 876.46942993586 48.65 2 0.04252057139495993 0.005608090668043269 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 420 19019 AALPNVYEV True PC9_epitope_Rep4 974.5072969667399 974.5067449679301 81.247 1 0.04251153019867661 0.005608090668043269 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 95015 10344 RYQQWMERF True NCI_RA007_Epitope_Rep4 1342.6240751378198 1342.62296993586 46.644 2 0.042510063679173565 0.005608090668043269 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 35874 23662 GVAEFFEFV True PC9_epitope_Rep2 1043.49639792987 1043.4953099358602 96.488 2 0.04250005564742962 0.005608090668043269 0.9438714419765777 ['ENSG00000131697|ENST00000378156|NPHP4', 'ENST00000489180.6_1_1:5923327-5936049:-|nuORF'] 106771 16307 SYFSGSHMF True PC9_epitope_Rep4 1061.4276667470501 1061.42656993586 70.686 2 0.04246905872717356 0.005608090668043269 0.9438714419765777 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 62153 7953 LLPGELAK True NCI_RA007_Epitope_Rep1 839.5116540711899 839.51054993586 34.929 2 0.04246603325108038 0.005608090668043269 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 132908 18520 VYTTTVHWL True PC9_epitope_Rep2 1118.5760452329 1118.57494993586 76.581 2 0.04244950628615772 0.005608090668043269 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 139825 4968 YVDGVEVHN True NCI_RA007_Epitope_Rep3 1030.47197408718 1030.47086993586 26.538 2 0.04244886756549584 0.005608090668043269 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 45172 14386 IRDPFIHEI True PC9_epitope_Rep4 1138.6134933707801 1138.6118549037901 63.246 3 0.042448322264178016 0.005608090668043269 0.9438714419765777 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 28685 14087 FSTALYGESDL True H1975_Epitope_Rep3 1201.55028397753 1201.54918993586 59.513 2 0.04242594159230629 0.005608090668043269 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 10824 11596 DAGTIAGL True H1975_Epitope_Rep1 716.37046914076 716.36992496793 49.593 1 0.04241295261059729 0.005608090668043269 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000508840.1_1_8:30095113-30095479:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF', 'ENSG00000044574|ENST00000324460|HSPA5'] 102671 4559 SQDPGTHVV True PC9_epitope_Rep1 938.4457593393399 938.44521496793 22.413 1 0.04241016228018778 0.005608090668043269 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 86146 7508 QPRYPVNSV True PC9_epitope_Rep4 1058.55089311422 1058.5497899358602 36.246 2 0.04240216195558218 0.005608090668043269 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 84725 10302 QHFRNLEAL True PC9_epitope_Rep2 1126.5883412521 1126.58668490379 44.955 3 0.042396830199180974 0.005608090668043269 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 19493 19881 ELQGSNLLTV True PC9_epitope_Rep2 1072.57643915572 1072.57534993586 81.865 2 0.04236565922176601 0.005608090668043269 0.9438714419765777 ['ENSG00000106328|ENST00000265825|FSCN3'] 89151 8159 REHAPFLVA True NCI_RA007_Epitope_Rep4 1038.5610638750998 1038.5599699358602 38.172 2 0.042353133439607595 0.005608090668043269 0.9438714419765777 ['ENSG00000177666|ENST00000336615|PNPLA2'] 72437 19305 MTLEGDIRL True PC9_epitope_Rep5 1046.5430308524599 1046.54192993586 79.302 2 0.04235242181342169 0.005608090668043269 0.9438714419765777 ['ENSG00000072786|ENST00000176763|STK10', 'ENST00000519710.1_1_5:171533786-171583726:-|nuORF', 'STK10|p.L257Cfs*9|1|0.5|ENSG00000072786|chr5:172106640-172106640|C/-|frameshift_variant', 'STK10|p.G468Afs*41|1|0.29|ENSG00000072786|chr5:172093563-172093563|C/-|frameshift_variant'] 13844 12368 DRAGSIVL True PC9_epitope_Rep3 829.46576650793 829.46466993586 52.603 2 0.04234902660143193 0.005608090668043269 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 44733 21340 IPQSIIECV True PC9_epitope_Rep5 1000.5263181591599 1000.52522993586 87.143 2 0.04232957056458957 0.005608090668043269 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 59849 14430 LHFFM[Oxidation]PGFAP True H1975_Epitope_Rep1 1178.5582873742198 1178.5571899358602 60.7 2 0.04230153578861413 0.005608090668043269 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'TUBB1|p.R262C|1|0.3|ENSG00000101162|chr20:59024211-59024211|C/T|missense_variant', 'ENST00000416519.1_1_7:55713940-55714147:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 108254 4385 TEAPLNPKA True H1975_Epitope_Rep2 939.5025459394699 939.50144993586 21.978 2 0.042284903154514206 0.005627066188366041 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 282 16870 AAGTVFTTV True PC9_epitope_Rep5 865.4545331178899 865.45342993586 69.901 2 0.04227105452764746 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 16287 5938 EEILAQAK True PC9_epitope_Rep2 900.4916469026 900.49054993586 28.23 2 0.04224363590493842 0.005627066188366041 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 106735 18641 SYDPDFNQL True PC9_epitope_Rep4 1097.46655435357 1097.46544993586 79.78 2 0.04224260886340391 0.005627066188366041 0.9438714419765777 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 118579 13459 VEADGAWVV True H1975_Epitope_Rep3 944.4603467743199 944.4597949679301 57.043 1 0.04224136255009028 0.005627066188366041 0.9438714419765777 ['ENSG00000211455|ENST00000389032|STK38L', 'nc|ENSG00000211455|Q9Y2H1-2|STK38L'] 130452 17576 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 72.795 2 0.042213017534524326 0.005627066188366041 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 47521 15305 IYLPEVRKI True PC9_epitope_Rep5 1129.68593003505 1129.68427490379 63.88 3 0.04220553109195989 0.005627066188366041 0.9438714419765777 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 70095 23355 LYIPIFSTF True PC9_epitope_Rep4 1099.59538369515 1099.5942899358602 98.093 2 0.042194032297930964 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12'] 31719 9394 GEIRTITVV True NCI_RA007_Epitope_Rep4 986.5760452328999 986.57494993586 42.988 2 0.042179243357392156 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 5858 7673 APGLPTARA True PC9_epitope_Rep1 852.4817509252399 852.48064993586 34.336 2 0.04216922748097877 0.005627066188366041 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 506 20425 AAPHFLPVL True PC9_epitope_Rep2 963.5541875895099 963.55308993586 83.992 2 0.0421673034242361 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000185504|Q0VG06-3|FAAP100', 'ENSG00000185504|ENST00000327787|FAAP100', 'C17orf70-NPLOC4|1|fusion'] 36848 13496 GVPTKVFNV True PC9_epitope_Rep4 959.5440168286299 959.54290993586 59.809 2 0.042149245334465735 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3'] 111752 11796 TLQKEGVIGV True PC9_epitope_Rep1 1042.6022599807397 1042.60116993586 50.243 2 0.04214355959410732 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 43446 13410 IHSSIVSTL True PC9_epitope_Rep1 955.5338460677501 955.53274993586 56.443 2 0.04214071257990475 0.005627066188366041 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 93765 10066 RTSTGIIGV True PC9_epitope_Rep2 902.5185303567799 902.51742993586 44.049 2 0.04212744586747286 0.005627066188366041 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 99815 9793 SLGSVQAPSY True NCI_RA007_Epitope_Rep3 1007.4923751785898 1007.49126993586 45.584 2 0.04212613384093219 0.005627066188366041 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000453838.2_1_1:182929095-182929497:-|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 8602 19392 AVAGATSLVTL True PC9_epitope_Rep4 1001.57571087973 1001.5746099358599 82.701 2 0.042123677618918075 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF', 'ENSG00000227507|ENST00000429299|LTB'] 96146 11127 SEEDPVTSIP True H1975_Epitope_Rep3 1072.49243474824 1072.4913299358602 47.896 2 0.0421116456455236 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 86414 10741 QQPQPLPPP True PC9_epitope_Rep1 1000.5341804209198 1000.53308993586 46.202 2 0.042098637716832005 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000204540|Q9UIG5-2|PSORS1C1', 'PSORS1C1|p.P145Lfs*7|1|0.33|ENSG00000204540|chr6:31139906-31139906|C/-|frameshift_variant', 'ENSG00000204540|ENST00000259881|PSORS1C1'] 39164 9718 HLETVILG True H1975_Epitope_Rep1 880.5018176634799 880.50072993586 42.309 2 0.042096911554960044 0.005627066188366041 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 127247 15085 VQIPGGTTV True PC9_epitope_Rep1 870.4810822189 870.47998993586 62.843 2 0.042093007933687206 0.005627066188366041 0.9438714419765777 ['ZFP64|p.H225Rfs*49|1|0.1|ENSG00000020256|chr20:52160209-52160212|GAGT/-|frameshift_variant', 'nc|ENSG00000020256|Q9NTW7-3|ZFP64', 'nc|ENSG00000020256|Q9NTW7-6|ZFP64', 'nc|ENSG00000020256|Q9NTW7|ZFP64', 'ENSG00000020256|ENST00000216923|ZFP64'] 102651 11690 SQDGHQWTL True PC9_epitope_Rep4 1070.4781220967802 1070.4770299358602 52.728 2 0.04207973839605662 0.005627066188366041 0.9438714419765777 ['ENSG00000185010|ENST00000360256|F8', 'nc|ENSG00000185010|P00451-2|F8'] 113443 15959 TQNPNYYNL True PC9_epitope_Rep5 1125.5090878718902 1125.50798993586 66.376 2 0.04207937829998109 0.005627066188366041 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 136405 10615 YHEPRSFEV True PC9_epitope_Rep5 1162.54072235334 1162.5390749037902 45.818 3 0.04207918875170936 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000160953|Q2TAK8-2|PWWP3A', 'ENST00000587460.5_1_19:1358605-1376572:+|nuORF', 'ENSG00000160953|ENST00000591337|PWWP3A', 'nc|ENSG00000160953|Q2TAK8-3|PWWP3A', 'ENST00000591433.5_1_19:1358605-1371443:+|nuORF'] 47835 17832 IYSTAFDYF True NCI_RA007_Epitope_Rep5 1125.5018772331298 1125.50137496793 75.39 1 0.042058349708628075 0.005627066188366041 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'nc|ENSG00000183506|A4QPH2-2|PI4KAP2', 'nc|ENSG00000183506|A4QPH2-4|PI4KAP2', 'ENST00000467443.5_1_22:21831964-21846319:-|nuORF', 'ENST00000462560.6_1_22:21830876-21842641:-|nuORF', 'nc|ENSG00000290425|Q8N8J0|PI4KAP1', 'ENST00000450651.5_1_22:21841260-21846319:-|nuORF'] 62205 21447 LLPQGLPGL True PC9_epitope_Rep2 906.5538532363399 906.55274993586 87.97 2 0.04204456551986178 0.005627066188366041 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 7464 14464 ASDMLQLEY True H1975_Epitope_Rep3 1068.4797618895598 1068.47917496793 60.994 1 0.04203809384927638 0.005627066188366041 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 140303 14566 YYDPKHVIF True PC9_epitope_Rep2 1180.59169529704 1180.5905899358602 61.297 2 0.04202781736467641 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 61727 21805 LLIPGLATA True PC9_epitope_Rep1 867.54295419947 867.54184993586 88.689 2 0.04202388364272462 0.005627066188366041 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 75232 8528 NPKEFYHEV True PC9_epitope_Rep1 1161.54547338061 1161.54382490379 37.64 3 0.042021770955368375 0.005627066188366041 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 47091 11026 IVVNLTGR True PC9_epitope_Rep2 870.5287011176599 870.52760993586 47.731 2 0.042019576458030616 0.005627066188366041 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 5040 16313 ALLGDLTKA True PC9_epitope_Rep3 900.52803241132 900.52692993586 67.884 2 0.04201784522304511 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 29079 20155 FTQDSNYLL True PC9_epitope_Rep1 1099.51858992643 1099.51748993586 82.355 2 0.042008855765794814 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 106328 6884 SVSDGIHSV True PC9_epitope_Rep2 899.4348603024702 899.43376993586 31.88 2 0.042007121247610746 0.005627066188366041 0.9438714419765777 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 25633 6823 FEVTKTAVA True H1975_Epitope_Rep2 964.5229470308799 964.52184993586 31.163 2 0.04194390338337157 0.005646805220365988 0.9438714419765777 ['ENSG00000074842|ENST00000262947|MYDGF'] 4601 15438 ALAEEVEQV True PC9_epitope_Rep2 986.4920408254198 986.49094993586 64.661 2 0.04194377436144187 0.005646805220365988 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 123444 12265 VIELLNPQRL True NCI_RA007_Epitope_Rep2 1193.71320741205 1193.71210993586 52.308 2 0.041941718087759074 0.005646805220365988 0.9438714419765777 ['ENST00000581395.5_1_17:8053998-8059672:-|nuORF'] 5042 16150 ALLGDLTKA True PC9_epitope_Rep5 900.52803241132 900.52692993586 67.108 2 0.0419251237753774 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 43934 10539 ILELAQGG True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 45.492 1 0.041924211721720596 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000139908|Q6SA08-3|TSSK4', 'nc|ENSG00000139908|Q6SA08|TSSK4', 'ENSG00000139908|ENST00000339917|TSSK4'] 47180 19666 IYADLNQNDF True PC9_epitope_Rep2 1211.5458673034302 1211.5447699358601 81.031 2 0.04188987384536362 0.005646805220365988 0.9438714419765777 ['ENSG00000064763|ENST00000536681|FAR2'] 42005 14851 IEDPLIVTP True H1975_Epitope_Rep3 995.55391280599 995.55280993586 62.507 2 0.041880077539629426 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.P626Lfs*11|1|0.21|ENSG00000120539|chr10:27170834-27170834|C/-|frameshift_variant'] 41139 20098 HYPPVQVLF True PC9_epitope_Rep5 1098.58621599378 1098.5851099358601 82.353 2 0.04187859499314864 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 96384 8849 SEHGLVVIA True NCI_RA007_Epitope_Rep5 923.5076313199099 923.50652993586 40.702 2 0.04187778251090597 0.005646805220365988 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 139598 7227 YTQKSLSLSPG True NCI_RA007_Epitope_Rep5 1179.6135529404298 1179.61244993586 34.476 2 0.04187756477924386 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1'] 118609 13568 VEALTTLEVA True H1975_Epitope_Rep1 1044.5702911461199 1044.56977496793 57.315 1 0.04186717426385808 0.005646805220365988 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU'] 31989 11966 GETIFVTA True NCI_RA007_Epitope_Rep4 836.42798401688 836.42743496793 53.029 1 0.04186664699016238 0.005646805220365988 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 74107 14135 NHVSSPFEL True PC9_epitope_Rep6 1028.4927095317598 1028.4916099358602 66.241 2 0.041855077739937116 0.005646805220365988 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 87926 12347 QVPEKLDVV True PC9_epitope_Rep2 1025.5757108797297 1025.57460993586 52.802 2 0.04184559440307003 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000490291.1_1_2:85578731-85581633:-|nuORF'] 56739 13440 LEALPQIAA True H1975_Epitope_Rep2 924.5280324113198 924.52748496793 56.83 1 0.041838812882821624 0.005646805220365988 0.9438714419765777 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000577789.5_1_17:27207581-27224656:-|nuORF'] 9428 12418 AVVPSTATV True PC9_epitope_Rep5 843.4701831820299 843.46963496793 52.766 1 0.04182994199698162 0.005646805220365988 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 72196 11619 MRSDTPAML True PC9_epitope_Rep1 1020.47323704048 1020.47212993586 49.57 2 0.04182642261056086 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 83651 7889 QEAEPPLTA True H1975_Epitope_Rep3 954.4658260775799 954.4652749679301 35.32 1 0.041808731873543 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 3473 18914 [Acetylation]-AGLNSLEAVK True PC9_epitope_Rep3 1042.5658747883201 1042.56476993586 77.973 2 0.04180806298857578 0.005646805220365988 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 138798 7583 YSDGKLQTV True PC9_epitope_Rep1 1009.5080252427299 1009.50692993586 33.987 2 0.041801902089748016 0.005646805220365988 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 102799 8525 SQFGTEHVL True NCI_RA007_Epitope_Rep5 1016.4927095317599 1016.49160993586 39.474 2 0.04180000490716238 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 124351 19675 VLDSEGYLLFY True H1975_Epitope_Rep3 1317.6492697428098 1317.64867496793 82.41 1 0.04179261219026396 0.005646805220365988 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 42357 8506 IELVSNSA True H1975_Epitope_Rep2 831.4337976733101 831.43324496793 37.672 1 0.04178162168303286 0.005646805220365988 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511643.5_1_4:39456165-39456631:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 13846 10931 DRAGSIVL True PC9_epitope_Rep4 829.46576650793 829.46466993586 49.815 2 0.04178046619872853 0.005646805220365988 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 8142 10949 ATFFGEVVK True NCI_RA007_Epitope_Rep3 996.5280324113198 996.52692993586 50.154 2 0.04175469393165879 0.005646805220365988 0.9438714419765777 ['nc|ENSG00000183527|O95456-2|PSMG1', 'ENSG00000183527|ENST00000331573|PSMG1'] 114155 13168 TRSQPFTL True PC9_epitope_Rep1 948.5028802926399 948.50178993586 55.516 2 0.041747789701872415 0.005646805220365988 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 86953 10798 QRVDPDVL True PC9_epitope_Rep5 940.4977949121999 940.49668993586 46.525 2 0.04174451423733778 0.005646805220365988 0.9438714419765777 ['BTG3|p.P193Afs*29|1|0.14|ENSG00000154640|chr21:17594276-17594277|-/T|frameshift_variant', 'ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 114981 7051 TTISKVSQV True PC9_epitope_Rep5 961.5444107514498 961.54330993586 32.09 2 0.041738607309393126 0.005646805220365988 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 106091 6725 SVMRPEQIMK True NCI_RA007_Epitope_Rep4 1217.6260492837698 1217.62441490379 32.491 3 0.04173591182107961 0.005669571736482054 0.9438714419765777 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 6525 11421 APVAEVPTA True PC9_epitope_Rep2 853.4545331178899 853.45342993586 49.252 2 0.04172023184043861 0.005669571736482054 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 125006 6140 VLNTNIDGR True PC9_epitope_Rep6 1000.53015766964 1000.52906993586 32.043 2 0.04171915617196595 0.005669571736482054 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 6378 5937 APRQPGLMA True PC9_epitope_Rep6 939.4960210903898 939.49492993586 31.128 2 0.04171480642055873 0.005669571736482054 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 126787 14695 VPSPGLPVSA True PC9_epitope_Rep6 922.5123823471799 922.51128993586 68.458 2 0.04170177856087802 0.005669571736482054 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 135068 21620 YALDLSTFL True PC9_epitope_Rep6 1041.53826274185 1041.5371699358602 96.04 2 0.041670426133137435 0.005692732980368271 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 140802 15095 YYSPHGHILVL True PC9_epitope_Rep2 1297.68190728377 1297.68025490379 63.321 3 0.04165662906022944 0.005692732980368271 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 8250 10690 ATILTNSVIA True H1975_Epitope_Rep1 1001.57571087973 1001.5746099358599 46.078 2 0.04164011272449287 0.0057122790588786145 0.9438714419765777 ['ENSG00000181001|ENST00000641645|OR52N1'] 32115 7083 GEYISKDGVP True H1975_Epitope_Rep3 1063.51858992643 1063.51748993586 32.212 2 0.04163853740625539 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000173210|O94929-3|ABLIM3', 'ENSG00000173210|ENST00000309868|ABLIM3', 'nc|ENSG00000173210|O94929-2|ABLIM3', 'ABLIM3|p.Q205Pfs*5|1|0.33|ENSG00000173210|chr5:149210760-149210761|-/C|frameshift_variant'] 26790 11749 FLDTNETPY True H1975_Epitope_Rep1 1098.48695544498 1098.48637496793 50.185 1 0.041611093967766626 0.0057122790588786145 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 35808 21269 GTYDIFYTA True PC9_epitope_Rep5 1049.47057710485 1049.46948993586 86.862 2 0.041606787906069004 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 34977 10495 GRADGYVL True PC9_epitope_Rep1 849.43446637965 849.43336993586 45.258 2 0.04159694762967589 0.0057122790588786145 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 97579 20351 SGYPGLLNGV True PC9_epitope_Rep2 975.5025459394699 975.50199496793 83.703 1 0.04159338325722457 0.0057122790588786145 0.9438714419765777 ['ENSG00000140006|ENST00000620954|WDR89'] 131755 24353 VYADGIFDLF True PC9_epitope_Rep5 1158.55972646242 1158.55917496793 98.707 1 0.041585171248358935 0.0057122790588786145 0.9438714419765777 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B'] 107001 15924 SYLHEPAVL True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 66.243 2 0.04156974970669963 0.0057122790588786145 0.9438714419765777 ['ENSG00000167306|ENST00000285039|MYO5B', 'ENST00000541028.5_1_15:52553308-52587917:-|nuORF', 'nc|ENSG00000128833|Q9NQX4-2|MYO5C', 'ENSG00000128833|ENST00000261839|MYO5C', 'nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 106794 18627 SYGDILHVI True PC9_epitope_Rep6 1015.53384606775 1015.53274993586 84.291 2 0.0415608476908882 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 84249 5541 QEVPGPAA True H1975_Epitope_Rep2 767.3813681776298 767.3808149679301 26.321 1 0.041555434774975857 0.0057122790588786145 0.9438714419765777 ['ENSG00000146278|ENST00000336032|PNRC1'] 70154 17933 LYLEFLQKF True NCI_RA007_Epitope_Rep5 1199.6590465808697 1199.6579499358602 75.769 2 0.041513823334348214 0.0057122790588786145 0.9438714419765777 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 98515 18010 SILGKFAVV True PC9_epitope_Rep6 932.5695033004798 932.56840993586 81.902 2 0.04150963008943729 0.0057122790588786145 0.9438714419765777 ['DHRS1-METTL3|1|fusion', 'ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 106350 4973 SVSGYIYHK True NCI_RA007_Epitope_Rep5 1052.52909504048 1052.5279899358602 25.831 2 0.041498074929562256 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 34693 18881 GQLSDLVVV True PC9_epitope_Rep3 928.52294703088 928.52184993586 77.85 2 0.041482808373319184 0.0057122790588786145 0.9438714419765777 ['ENST00000511288.1_1_17:48545715-48548505:+|nuORF', 'ENST00000506085.5_1_17:48545715-48551043:+|nuORF'] 27586 13891 FPRPVTVEP True PC9_epitope_Rep5 1040.5654805492 1040.5643899358602 58.452 2 0.04148003126275508 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 61290 15537 LLDTVELATY True H1975_Epitope_Rep3 1136.5965058939598 1136.59540993586 65.181 2 0.04145935858437909 0.0057122790588786145 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 107223 19922 SYPKIIEEF True PC9_epitope_Rep3 1124.57537652656 1124.57426993586 81.871 2 0.04145759938421233 0.0057122790588786145 0.9438714419765777 ['ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'nc|ENSG00000144554|Q9BXW9-4|FANCD2'] 116604 16415 TYGGSWKF True PC9_epitope_Rep1 944.43921740692 944.43812993586 67.963 2 0.041455891051166587 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000146416|Q9NVV5-6|AIG1', 'nc|ENSG00000146416|Q9NVV5-5|AIG1', 'nc|ENSG00000146416|Q9NVV5-3|AIG1', 'nc|ENSG00000146416|Q9NVV5-4|AIG1', 'ENSG00000146416|ENST00000357847|AIG1', 'nc|ENSG00000146416|Q9NVV5-1|AIG1'] 707 10198 AAVGTTVSL True H1975_Epitope_Rep2 817.45453311789 817.4539849679301 44.231 1 0.04143263742814401 0.0057122790588786145 0.9438714419765777 ['ENST00000274457.4_1_5:114880280-114880403:-|nuORF'] 133001 15881 VYVLTVTEL True NCI_RA007_Epitope_Rep3 1035.5852129342697 1035.5841099358602 70.123 2 0.04142679935820536 0.0057122790588786145 0.9438714419765777 ['ENSG00000196368|ENST00000375992|NUDT11', 'ENSG00000122824|ENST00000356450|NUDT10'] 43454 6288 IHSSSTVL True PC9_epitope_Rep1 842.44978209062 842.44868993586 29.0 2 0.04141927396131463 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 39995 10442 HQSAESLTL True PC9_epitope_Rep5 984.48762415132 984.48652993586 45.152 2 0.041415022642643684 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'ENSG00000141258|ENST00000268989|SGSM2', 'ENST00000574857.1_1_17:2267361-2267601:+|nuORF'] 139675 21367 YTTDFIYQL True PC9_epitope_Rep4 1162.55464108198 1162.5540749679299 90.355 1 0.04140488429438614 0.0057122790588786145 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 38682 4164 HHSDGSVSL True PC9_epitope_Rep1 937.42535824793 937.42426993586 20.913 2 0.04140236541417111 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 1457 5997 AEELASGHLA True H1975_Epitope_Rep2 996.4876241513199 996.48652993586 28.047 2 0.04140042435240154 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 84805 11582 QHIQVTNEI True PC9_epitope_Rep2 1080.5563724174801 1080.55526993586 49.876 2 0.04139093354934654 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000120156|Q02763-3|TEK', 'nc|ENSG00000120156|Q02763-2|TEK', 'ENSG00000120156|ENST00000380036|TEK'] 28889 16158 FTDVPSIQIY True H1975_Epitope_Rep1 1181.5968402471299 1181.59574993586 67.497 2 0.04138091312255916 0.0057122790588786145 0.9438714419765777 ['nc|ENSG00000163539|O75122-2|CLASP2', 'nc|ENSG00000163539|O75122|CLASP2', 'ENSG00000163539|ENST00000682230|CLASP2', 'nc|ENSG00000163539|O75122-3|CLASP2'] 133336 9101 WETVTTAA True H1975_Epitope_Rep3 877.4181476091699 877.4175949679301 39.995 1 0.04136273819474264 0.0057122790588786145 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 4624 17001 ALAPGLPTA True PC9_epitope_Rep5 809.46470387877 809.46360993586 70.413 2 0.04135153814691699 0.0057122790588786145 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 25510 7669 FEQEMATAA True H1975_Epitope_Rep2 996.4222470134398 996.42114993586 34.45 2 0.04133316976958254 0.005734616014792969 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 40333 6220 HRSDALQL True PC9_epitope_Rep2 938.4933782380999 938.49228993586 29.324 2 0.04131269531988039 0.005734616014792969 0.9438714419765777 ['nc|ENSG00000122861|P00749-2|PLAU', 'ENSG00000122861|ENST00000372764|PLAU'] 47483 19671 IYKIDFVRF True PC9_epitope_Rep2 1199.6702799709099 1199.66863490379 81.051 3 0.04131207656622115 0.005734616014792969 0.9438714419765777 ['nc|ENSG00000109103|Q13432-2|UNC119', 'ENSG00000109103|ENST00000335765|UNC119'] 61963 11004 LLLPGELAK True H1975_Epitope_Rep1 952.5957180483199 952.59462993586 47.287 2 0.041300950527381315 0.005734616014792969 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 58452 16362 LEWPSLTA True H1975_Epitope_Rep2 915.4701831820299 915.46908993586 68.158 2 0.0412854002027092 0.005734616014792969 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 125230 12980 VLQSALAAIR True PC9_epitope_Rep6 1040.6342288153598 1040.63312993586 61.502 2 0.041258419410149114 0.005734616014792969 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 47618 22025 IYPDSFTVL True PC9_epitope_Rep5 1053.53826274185 1053.5371699358602 89.747 2 0.0412300823285098 0.005734616014792969 0.9438714419765777 ['RWDD1-FAM26D|1|fusion', 'ENSG00000111832|ENST00000466444|RWDD1'] 91766 8664 RPKPSSSPVIF True PC9_epitope_Rep4 1213.68190728377 1213.68025490379 40.816 3 0.041229912368106636 0.005734616014792969 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 102481 8205 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 36.54 2 0.04118985989486871 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 135059 20598 YALDLSTFL True H1975_Epitope_Rep1 1041.53826274185 1041.5371699358602 85.647 2 0.04118567545433382 0.005755059071236402 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 118115 21389 VAVAGLLTV True PC9_epitope_Rep3 841.52730413533 841.5267549679301 87.572 1 0.041182942288014876 0.005755059071236402 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 88667 9050 RAYAKFYTL True NCI_RA007_Epitope_Rep4 1131.60767971435 1131.60658993586 41.644 2 0.041181933431999954 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C', 'ENST00000380437.8_1_9:19290781-19335045:+|nuORF'] 137477 20144 YLPELLQTV True PC9_epitope_Rep6 1074.5961119711399 1074.5950099358602 90.156 2 0.04116810110596374 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 133335 9169 WETVTTAA True H1975_Epitope_Rep2 877.4181476091699 877.4175949679301 40.222 1 0.04116654622754502 0.005755059071236402 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 105319 18584 STVEALQNL True PC9_epitope_Rep5 973.50802524273 973.50692993586 76.508 2 0.04115470143032943 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000143401|Q9BTT0-3|ANP32E', 'ENSG00000143401|ENST00000583931|ANP32E'] 95572 6313 SASGPLHSV True PC9_epitope_Rep3 853.4293809992101 853.42828993586 29.313 2 0.04114431445054796 0.005755059071236402 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 135012 10129 YAGSGNVL True PC9_epitope_Rep4 779.38136817763 779.3808149679301 46.637 1 0.041140721732535926 0.005755059071236402 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 116059 4833 TVRSSTSSI True PC9_epitope_Rep6 936.48762415132 936.48652993586 26.098 2 0.04112589458628045 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000047932|Q9HD26-3|GOPC'] 120256 16697 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 69.053 2 0.041108667573115876 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 74135 12065 NHYGGVVSL True PC9_epitope_Rep2 944.4715801643599 944.47048993586 51.721 2 0.04109975563727981 0.005755059071236402 0.9438714419765777 ['SPACA9|p.A130G|1|0.27|ENSG00000165698|chr9:132888331-132888331|C/G|missense_variant', 'nc|ENSG00000165698|Q96E40-2|SPACA9', 'ENSG00000165698|ENST00000356311|SPACA9'] 85832 13688 QMISRIEYV True PC9_epitope_Rep6 1137.58523001761 1137.5841299358601 64.436 2 0.04109739910903431 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 43457 6263 IHSSSTVL True PC9_epitope_Rep3 842.44978209062 842.44868993586 29.127 2 0.04108947607272625 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 108245 9491 TEALHFVAA True H1975_Epitope_Rep2 957.4919812557698 957.49088993586 41.476 2 0.04107118848524748 0.005755059071236402 0.9438714419765777 ['ENSG00000125817|ENST00000379751|CENPB'] 39 16350 AAAAVIPTV True PC9_epitope_Rep4 811.48035394291 811.47980496793 70.855 1 0.0410657305033151 0.005755059071236402 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 72526 23285 MVDGTLLLL True PC9_epitope_Rep1 973.5518046310099 973.55125496793 94.353 1 0.04106172575410692 0.005755059071236402 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 126969 7513 VPVSLKEA True PC9_epitope_Rep2 841.49091862661 841.48982993586 34.267 2 0.04103664785349369 0.005755059071236402 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 10189 5346 C[Carbamidomethyl]C[Carbamidomethyl]TESLVNR True NCI_RA007_Epitope_Rep2 1137.49067856863 1137.48958993586 25.414 2 0.04103065751433293 0.005755059071236402 0.9438714419765777 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 1284 7229 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 32.741 1 0.04102049276591319 0.005755059071236402 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 104210 15933 SSDLLSDIY True H1975_Epitope_Rep2 1011.47605640811 1011.47494993586 66.486 2 0.04098769259309159 0.005755059071236402 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 7877 7033 ATAPPAPAY True NCI_RA007_Epitope_Rep3 857.42831837005 857.4272299358599 34.781 2 0.04096952932609217 0.005755059071236402 0.9438714419765777 ['ENSG00000135837|ENST00000367607|CEP350'] 31907 6881 GEQRSRFLAV True H1975_Epitope_Rep2 1161.6254550368099 1161.62380490379 31.389 3 0.040922689383735174 0.0057764265668849395 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'ENST00000568291.2_1_16:70588380-70590279:+|nuORF'] 7029 4640 AQSGHEVTL True NCI_RA007_Epitope_Rep3 940.46140940348 940.46030993586 25.175 2 0.040919004507039766 0.0057764265668849395 0.9438714419765777 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'EPS15L1|p.F303Lfs*11|1|0.25|ENSG00000127527|chr19:16421360-16421360|G/-|frameshift_variant', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1', 'ENST00000597559.5_1_19:16547732-16582756:-|nuORF'] 34986 9160 GRADGYVL True PC9_epitope_Rep4 849.43446637965 849.43336993586 42.826 2 0.04091782694992231 0.0057764265668849395 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 106944 21412 SYLDNFIKI True PC9_epitope_Rep2 1111.59136094387 1111.59026993586 87.832 2 0.04089170708345914 0.0057764265668849395 0.9438714419765777 ['nc|ENSG00000130669|O96013-2|PAK4', 'nc|ENSG00000130669|O96013-3|PAK4', 'nc|ENSG00000130669|O96013-4|PAK4', 'ENSG00000130669|ENST00000360442|PAK4'] 72393 10653 MTEKLYPGYY True H1975_Epitope_Rep2 1263.58456131127 1263.5834699358602 46.002 2 0.040890278526755065 0.0057764265668849395 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 28869 12598 FTDTEGLPY True H1975_Epitope_Rep2 1041.4654917244097 1041.46497496793 53.556 1 0.04088405567374195 0.0057764265668849395 0.9438714419765777 ['nc|ENSG00000102554|Q13887-4|KLF5', 'ENSG00000102554|ENST00000377687|KLF5'] 17355 5535 EHDTTEYKL True PC9_epitope_Rep2 1134.51931820242 1134.51766490379 26.682 3 0.040868024842897616 0.0057764265668849395 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 99579 8251 SLFGSPVAK True NCI_RA007_Epitope_Rep3 904.50181766348 904.50072993586 39.586 2 0.040867665561051966 0.0057764265668849395 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 42441 13775 IEQFPGIEP True H1975_Epitope_Rep3 1028.5178616504397 1028.51676993586 58.288 2 0.04085545776310633 0.0057764265668849395 0.9438714419765777 ['ENST00000487133.1_1_X:119739298-119742228:+|nuORF', 'nc|ENSG00000232119|Q9ULC4-2|MCTS1', 'ENSG00000232119|ENST00000371317|MCTS1', 'nc|ENSG00000232119|Q9ULC4-3|MCTS1', 'MCTS1|p.Y79Ifs*4|1|0.59|ENSG00000232119|chrX:120606145-120606145|T/-|frameshift_variant'] 24602 6794 FANGRSTGL True PC9_epitope_Rep5 921.46682913709 921.4657299358599 31.104 2 0.040837130160733724 0.0057764265668849395 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 70121 17827 LYKDVRDLL True PC9_epitope_Rep1 1133.6444591458899 1133.64280490379 73.365 3 0.04082853790791551 0.0057764265668849395 0.9438714419765777 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1', 'ANKZF1|p.T270S|1|0.12|ENSG00000163516|chr2:219233422-219233422|A/T|missense_variant'] 87690 13115 QVDPLSALKY True H1975_Epitope_Rep1 1132.6128246644398 1132.61172993586 55.539 2 0.0408171353898969 0.0057764265668849395 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1', 'nc|ENSG00000128585|Q9UL63-2|MKLN1', 'ENST00000498778.5_1_7:131151082-131172419:+|nuORF', 'ENST00000497746.1_1_7:131149041-131155790:+|nuORF'] 92224 12465 RQIIAVVL True NCI_RA007_Epitope_Rep4 910.5963867546599 910.59528993586 54.954 2 0.0408159876377645 0.0057764265668849395 0.9438714419765777 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 119665 8481 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43872496793 37.574 1 0.04081586456673705 0.0057764265668849395 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 72211 6354 MRSPQMVSA True PC9_epitope_Rep6 1005.47357139365 1005.47246993586 33.015 2 0.040786939455023256 0.0057764265668849395 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 139198 15680 YSVDIPLDK True PC9_epitope_Rep2 1048.54407639828 1048.5429699358601 65.59 2 0.040720243476811774 0.005799406028576106 0.9438714419765777 ['ENSG00000131469|ENST00000253788|RPL27'] 40639 12855 HTGPVFTV True PC9_epitope_Rep1 856.44430278736 856.44320993586 54.321 2 0.04071905919371718 0.005799406028576106 0.9438714419765777 ['ENST00000547496.5_1_12:89853476-89885774:-|nuORF', 'ENST00000539190.6_1_12:89855074-89919672:-|nuORF', 'nc|ENSG00000139323|Q8TC44-2|POC1B', 'ENSG00000139323|ENST00000313546|POC1B'] 86302 18881 QQFQEPFVAV True PC9_epitope_Rep6 1191.59242357303 1191.5913299358601 85.275 2 0.04071305126588507 0.005799406028576106 0.9438714419765777 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67958045-67971691:-|nuORF'] 47328 14218 IYGYVAEQF True NCI_RA007_Epitope_Rep5 1088.5178616504397 1088.51727496793 61.381 1 0.04069306088430174 0.005820340805497768 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 70947 9018 MEMPSQPAP True H1975_Epitope_Rep1 986.4201388384598 986.41904993586 39.594 2 0.04068878956439157 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.D632Efs*4|1|0.14|ENSG00000048028|chr11:113812336-113812352|TCAGGCCTCCATAGGAA/-|frameshift_variant'] 129140 10721 VTDDALVY True H1975_Epitope_Rep2 894.4334633201399 894.4329149679301 46.265 1 0.040662822913903184 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 66151 4567 LSPDREGP True NCI_RA007_Epitope_Rep4 869.4242956187699 869.42318993586 23.968 2 0.04065842771306413 0.005820340805497768 0.9438714419765777 ['ARHGAP33|p.G761Afs*35|1|0.13|ENSG00000004777|chr19:35787326-35787326|G/-|frameshift_variant', 'nc|ENSG00000004777|O14559-11|ARHGAP33', 'ENSG00000004777|ENST00000007510|ARHGAP33', 'nc|ENSG00000004777|O14559-12|ARHGAP33'] 92147 7077 RQAPPHIEL True NCI_RA007_Epitope_Rep4 1059.58252759567 1059.5814299358601 33.845 2 0.04064024088726571 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 8601 20099 AVAGATSLVTL True PC9_epitope_Rep2 1001.57571087973 1001.5746099358599 82.719 2 0.040631799754933334 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000227507|Q06643-2|LTB', 'ENST00000482429.1_1_6:31549873-31550179:-|nuORF', 'ENSG00000227507|ENST00000429299|LTB'] 46941 21346 IVLPEDLQL True PC9_epitope_Rep4 1038.5961119711399 1038.59557496793 90.276 1 0.0406282488039286 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 8329 16173 ATLPSTVAV True PC9_epitope_Rep5 857.4858332461699 857.48472993586 67.198 2 0.040624074963432635 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 70867 19019 MEGLSWLV True H1975_Epitope_Rep3 933.4629896266099 933.4624449679301 79.753 1 0.04060956467801213 0.005820340805497768 0.9438714419765777 ['ENST00000378119.8_1_6:24720562-24720727:-|nuORF'] 86656 15099 QRGPPIIL True PC9_epitope_Rep3 892.5494365622399 892.54832993586 63.215 2 0.04059967137681459 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 77810 19477 PAEPAFLA True PC9_epitope_Rep5 814.4225047136199 814.42140993586 79.971 2 0.040586198159496996 0.005820340805497768 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 71425 24416 MIPLLLAAL True PC9_epitope_Rep5 953.5983609006099 953.59781496793 98.954 1 0.04058291059597379 0.005820340805497768 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 11675 18238 DHDLQAIL True PC9_epitope_Rep1 923.47124581119 923.47014993586 74.944 2 0.04054642250355252 0.005820340805497768 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000477802.1_1_1:182828020-182829385:+|nuORF'] 26791 11907 FLDTNETPY True H1975_Epitope_Rep1 1098.48695544498 1098.48637496793 50.801 1 0.04054637188343144 0.005820340805497768 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 131524 18837 VVVGDLVEV True PC9_epitope_Rep6 927.5276980581499 927.5271449679301 85.101 1 0.040538242314558784 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF'] 94588 14640 RYKGPGFEYF True PC9_epitope_Rep4 1262.6084079903396 1262.60730993586 64.242 2 0.040530487640973806 0.005820340805497768 0.9438714419765777 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 35165 10761 GSDDGVLAY True H1975_Epitope_Rep3 895.3923267841499 895.39177496793 46.473 1 0.04051529131060507 0.005820340805497768 0.9438714419765777 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 20562 20324 EQDQSVLVL True PC9_epitope_Rep1 1029.5342399905699 1029.53367496793 83.005 1 0.040506322883389206 0.005820340805497768 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 33899 19854 GLYEGLTWL True H1975_Epitope_Rep2 1050.53859709502 1050.53750993586 82.351 2 0.0404698773145675 0.0058427596522389455 0.9438714419765777 ['ENSG00000165527|ENST00000298316|ARF6'] 116459 5123 TYAEKLHRL True PC9_epitope_Rep4 1129.62439240765 1129.6227449037901 26.363 3 0.040468144672055034 0.0058427596522389455 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 48492 8467 KEFIKIVEA True NCI_RA007_Epitope_Rep1 1075.62774645259 1075.62664993586 36.933 2 0.04046446746156734 0.0058427596522389455 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 119664 8470 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43816993586 37.531 2 0.04046348379491599 0.0058427596522389455 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 41137 19027 HYPPVQVLF True PC9_epitope_Rep4 1098.58621599378 1098.5851099358601 81.277 2 0.04045562026358132 0.0058427596522389455 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 34475 19195 GQDGLYIGV True PC9_epitope_Rep4 920.4603467743199 920.45924993586 81.933 2 0.040427363244545045 0.0058427596522389455 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 77042 14697 NVVQSVTSV True PC9_epitope_Rep2 931.49746055903 931.49636993586 61.796 2 0.04040953372092556 0.0058427596522389455 0.9438714419765777 ['ENSG00000173267|ENST00000372017|SNCG', 'ENST00000483064.1_1_10:88719196-88722739:+|nuORF', 'ENST00000465679.5_1_10:88718421-88722579:+|nuORF'] 104462 11448 SSLPTQLFK True NCI_RA007_Epitope_Rep1 1019.5651461960299 1019.56404993586 48.494 2 0.04040410102004637 0.0058643489638092565 0.9438714419765777 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 54919 12949 LAGPVVEI True H1975_Epitope_Rep1 796.4694549060399 796.46890496793 54.883 1 0.040378159921392556 0.0058643489638092565 0.9438714419765777 ['OR6N1|p.F168Ifs*13|1|0.18|ENSG00000197403|chr1:158766182-158766183|-/G|frameshift_variant', 'ENSG00000197403|ENST00000641846|OR6N1'] 26121 11517 FHGDAQVAL True PC9_epitope_Rep5 956.4715801643599 956.47048993586 49.296 2 0.04037463457433297 0.0058643489638092565 0.9438714419765777 ['ENSG00000143412|ENST00000368947|ANXA9'] 52140 19442 KLVEFDFLGA True PC9_epitope_Rep6 1137.60701100801 1137.6059099358602 87.445 2 0.04034670548804906 0.0058643489638092565 0.9438714419765777 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|9|fusion', 'ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 33164 5560 GKSKTIVGL True NCI_RA007_Epitope_Rep4 901.5596668927699 901.55856993586 27.987 2 0.04034154125986418 0.0058643489638092565 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 116560 23015 TYFSTPLLL True PC9_epitope_Rep3 1053.57464825057 1053.57354993586 93.793 2 0.04033608944471331 0.0058643489638092565 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 4846 24004 ALFGALFLA True PC9_epitope_Rep5 921.5323895157699 921.53184496793 97.314 1 0.04032195558076569 0.0058643489638092565 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 29722 18145 FVPIKVEQI True PC9_epitope_Rep5 1071.63283183303 1071.6317299358602 74.804 2 0.04031909570194491 0.0058643489638092565 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 35910 21326 GVAIPLPGV True PC9_epitope_Rep1 821.50108938749 821.5005449679301 86.861 1 0.04031246060691841 0.0058643489638092565 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 2083 13266 AELLATLQA True H1975_Epitope_Rep2 928.5229470308799 928.52184993586 56.158 2 0.040308053642240535 0.0058643489638092565 0.9438714419765777 ['ENSG00000148798|ENST00000369849|INA'] 43764 8693 IIYGGSVTG True H1975_Epitope_Rep1 865.45453311789 865.4539849679301 38.368 1 0.04030705467702592 0.0058643489638092565 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 128471 9832 VSEVSSLNY True H1975_Epitope_Rep1 996.4763907612801 996.47584496793 42.748 1 0.04029608784358073 0.0058643489638092565 0.9438714419765777 ['ENSG00000117000|ENST00000372771|RLF'] 109839 17002 THLLGVAL True PC9_epitope_Rep4 822.49633836022 822.49524993586 73.391 2 0.040293876684937696 0.0058643489638092565 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 60175 12248 LHYPSTTAL True PC9_epitope_Rep4 1001.51819600361 1001.51708993586 54.929 2 0.04026976295661351 0.005887025183385507 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 135501 5408 YEDM[Oxidation]AAFM[Oxidation]K True H1975_Epitope_Rep3 1136.4518336504398 1136.4507299358602 25.864 2 0.04025955826995712 0.005887025183385507 0.9438714419765777 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 115346 20517 TVEEQVINI True PC9_epitope_Rep1 1043.54989005471 1043.5487899358602 83.729 2 0.040255423000498086 0.005887025183385507 0.9438714419765777 ['ENST00000476275.5_1_1:78046613-78098535:-|nuORF', 'nc|ENSG00000036549|Q8IYH5-4|ZZZ3'] 48791 8085 KEQVPGFTP True H1975_Epitope_Rep2 1001.5181960036098 1001.51708993586 36.046 2 0.04025343390758057 0.005887025183385507 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 88325 16823 QYLNKNALTTL True PC9_epitope_Rep3 1277.6979512707298 1277.6968499358602 69.861 2 0.04023672927189058 0.005887025183385507 0.9438714419765777 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant'] 133242 9461 WEEETVPTT True H1975_Epitope_Rep1 1090.4818700645399 1090.48127496793 41.309 1 0.0402253753723406 0.005907350331558793 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 84289 8028 QEYSEFVKA True NCI_RA007_Epitope_Rep3 1099.5185899264297 1099.51748993586 38.67 2 0.04022196324845779 0.005907350331558793 0.9438714419765777 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 131767 13689 VYADQPHIF True PC9_epitope_Rep6 1088.52909504048 1088.5279899358602 64.44 2 0.040208054535429756 0.005907350331558793 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 83227 13046 QAALEFHGV True PC9_epitope_Rep4 970.4872302284999 970.48612993586 58.074 2 0.040168684637684096 0.005907350331558793 0.9438714419765777 ['ENSG00000187231|ENST00000428443|SESTD1'] 13872 16351 DRDGGFVL True PC9_epitope_Rep1 877.4293809992099 877.42828993586 67.715 2 0.04016860961488996 0.005907350331558793 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 71635 22316 MLPLLAALL True PC9_epitope_Rep6 953.5983609006099 953.59781496793 98.809 1 0.04015185395018359 0.005907350331558793 0.9438714419765777 ['ENSG00000249992|ENST00000503771|TMEM158'] 68584 22056 LTYGTMVFV True PC9_epitope_Rep5 1029.5205045027299 1029.51940993586 89.865 2 0.04014376767246008 0.005907350331558793 0.9438714419765777 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'nc|ENSG00000161533|Q15067|ACOX1', 'ENST00000589744.1_1_17:73949530-73951667:-|nuORF'] 127038 19976 VPYLVGQVV True PC9_epitope_Rep4 972.5644179200399 972.56386496793 84.971 1 0.04012422488675656 0.005907350331558793 0.9438714419765777 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'UROD|p.G210A|1|0.19|ENSG00000126088|chr1:45014063-45014063|G/C|missense_variant'] 124798 5027 VLLGETGK True NCI_RA007_Epitope_Rep5 815.47526856247 815.47416993586 26.039 2 0.040116752080434435 0.005907350331558793 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 87962 11463 QVRDVIIAA True PC9_epitope_Rep2 983.5763795860698 983.57528993586 49.411 2 0.040103400906986816 0.005907350331558793 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 139570 5809 YTNKEMLKY True H1975_Epitope_Rep3 1188.58489566444 1188.58324490379 27.367 3 0.04010221651091398 0.005907350331558793 0.9438714419765777 ['ENSG00000047188|ENST00000161863|YTHDC2'] 118636 3127 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 16.473 2 0.040094500597892435 0.005907350331558793 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 37542 20355 GYMEGYYTF True PC9_epitope_Rep4 1129.44264810485 1129.44207496793 86.438 1 0.04008820189750726 0.005907350331558793 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 136521 10278 YHNSVECL True PC9_epitope_Rep5 963.41201668291 963.41090993586 44.521 2 0.040088161880959594 0.005907350331558793 0.9438714419765777 ['ENST00000414369.2_1_2:53984069-54014663:-|nuORF', 'ENSG00000115239|ENST00000263634|ASB3', 'nc|ENSG00000115239|Q9Y575-3|ASB3'] 91555 8506 RPAGSYLEA True PC9_epitope_Rep5 962.48214484806 962.48104993586 37.66 2 0.04008188604932541 0.005907350331558793 0.9438714419765777 ['ENST00000573483.1_1_17:3785816-3788993:-|nuORF', 'CAMKK1|p.P352Hfs*30|1|0.16|ENSG00000004660|chr17:3872610-3872623|ATCGTCGATGAATG/T|frameshift_variant', 'ENSG00000004660|ENST00000348335|CAMKK1', 'nc|ENSG00000004660|Q8N5S9-2|CAMKK1'] 6928 7172 AQLGEDIR True PC9_epitope_Rep5 900.46649478392 900.46538993586 32.554 2 0.04007928582517027 0.005907350331558793 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG', 'TFG|p.P25R|1|0.33|ENSG00000114354|chr3:100713759-100713759|C/G|missense_variant'] 76229 17082 NRYYPQIL True PC9_epitope_Rep5 1065.56072952193 1065.5596299358601 70.726 2 0.04006082510206802 0.005907350331558793 0.9438714419765777 ['ENST00000495641.5_1_9:95858537-95872895:+|nuORF', 'ENST00000466929.5_1_9:95858543-95872895:+|nuORF', 'ENST00000468781.5_1_9:95858594-95875386:+|nuORF', 'ENSG00000165233|ENST00000375464|CARD19', 'nc|ENSG00000165233|Q96LW7|CARD19'] 42279 15128 IEILSDVQLIK True NCI_RA007_Epitope_Rep1 1269.75440351769 1269.7533099358602 62.914 2 0.04004260959186733 0.005907350331558793 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0'] 30198 20894 FYVPAEPKLAF True PC9_epitope_Rep3 1280.68051030144 1280.6794099358601 85.644 2 0.040037941993428715 0.005907350331558793 0.9438714419765777 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461190.1_1_3:123871117-123871351:-|nuORF', 'ENST00000449200.1_1_22:40502501-40502987:-|nuORF'] 89053 9785 REEFPTLQA True H1975_Epitope_Rep3 1089.5454733806098 1089.54436993586 42.662 2 0.04003671938627113 0.005907350331558793 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 2769 7445 AEVDAAMAA True H1975_Epitope_Rep2 847.3745685450299 847.3740149679301 33.582 1 0.04003007018926369 0.005907350331558793 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 71581 22948 MLFPGSIAL True PC9_epitope_Rep1 947.51502519947 947.51392993586 93.07 2 0.04002707600932897 0.005907350331558793 0.9438714419765777 ['ENSG00000101367|ENST00000375571|MAPRE1'] 68640 19033 LVAPPLPAA True PC9_epitope_Rep1 847.51673945163 847.51564993586 78.001 2 0.040014391772958326 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 21782 13193 ESDFSNPLY True H1975_Epitope_Rep3 1070.4556553167 1070.45454993586 56.0 2 0.040014124593546016 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 43535 8229 IIDPNGVIK True H1975_Epitope_Rep1 967.57023157647 967.56912993586 36.596 2 0.040002287976948325 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000165672|P30048-2|PRDX3', 'ENSG00000165672|ENST00000298510|PRDX3'] 14385 17050 DTEPPPLLVY True H1975_Epitope_Rep3 1142.5859412102598 1142.58537496793 71.183 1 0.039996769001198924 0.005917573328984461 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 43144 8836 IGQGYLIKDGK True PC9_epitope_Rep5 1190.66592286646 1190.66428490379 38.934 3 0.03999329265635939 0.005917573328984461 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 59850 14447 LHFFM[Oxidation]PGFAP True H1975_Epitope_Rep3 1178.5582873742198 1178.5571899358602 60.927 2 0.03999272542150628 0.005917573328984461 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENST00000290377.9_1_9:141071128-141071713:+|nuORF', 'TUBB1|p.R262C|1|0.3|ENSG00000101162|chr20:59024211-59024211|C/T|missense_variant', 'ENST00000416519.1_1_7:55713940-55714147:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 40406 16027 HRWLKGGVVL True PC9_epitope_Rep5 1163.6927467509897 1163.69110490379 66.636 3 0.0399911509379304 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 35766 21048 GTVEQIVYL True PC9_epitope_Rep3 1020.5491617787197 1020.54806993586 86.24 2 0.03999111710678872 0.005917573328984461 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 97546 20251 SGVEVLVSV True PC9_epitope_Rep2 887.4963979298699 887.4958449679301 83.315 1 0.03998916534729825 0.005917573328984461 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 11752 14127 DHIAHIIEL True PC9_epitope_Rep6 1059.57129420563 1059.57018993586 66.211 2 0.0399675235551606 0.005917573328984461 0.9438714419765777 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2'] 84904 16993 QHSPDLMSF True PC9_epitope_Rep5 1060.46478053176 1060.4636899358602 70.383 2 0.03996058664085296 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 11501 8473 DGFVALSK True H1975_Epitope_Rep3 835.44396843419 835.44286993586 37.576 2 0.039947891377378565 0.005917573328984461 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 83650 7925 QEAEPPLTA True H1975_Epitope_Rep2 954.4658260775799 954.4652749679301 35.429 1 0.03991126576637436 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 106692 13807 SYANVQDGF True PC9_epitope_Rep6 999.4297749220299 999.42866993586 64.911 2 0.03990112333776591 0.005917573328984461 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 25811 21041 FGANAILGV True PC9_epitope_Rep5 860.4756029156399 860.4745099358599 85.994 2 0.039897970847031346 0.005917573328984461 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 72567 23029 MVLHIPDIFL True PC9_epitope_Rep5 1196.66275206232 1196.6616499358602 93.573 2 0.03989339928271609 0.005917573328984461 0.9438714419765777 ['ENST00000462685.1_1_2:74159806-74173970:+|nuORF', 'nc|ENSG00000114956|Q16854-6|DGUOK'] 69051 22365 LVIGQFLEA True PC9_epitope_Rep1 988.5593325395998 988.55822993586 90.844 2 0.03986836846055678 0.005917573328984461 0.9438714419765777 ['ENST00000596386.1_1_19:40477100-40485896:+|nuORF', 'ENST00000593455.5_1_19:40477100-40486089:+|nuORF', 'nc|ENSG00000013275|P43686-2|PSMC4', 'ENSG00000013275|ENST00000157812|PSMC4', 'ENST00000601697.5_1_19:40477100-40486546:+|nuORF'] 112864 9757 TPNRATFVV True PC9_epitope_Rep6 1003.5450794577899 1003.5439899358599 47.959 2 0.03985674464915535 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000113161|P04035-2|HMGCR', 'ENSG00000113161|ENST00000287936|HMGCR', 'nc|ENSG00000113161|P04035-3|HMGCR'] 86291 16568 QQDYFPKAL True PC9_epitope_Rep5 1108.5553097883198 1108.5542099358602 68.733 2 0.039811538320101876 0.005917573328984461 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 22207 11639 ETDGDMLGY True H1975_Epitope_Rep2 999.3855271515499 999.38497496793 49.84 1 0.039811040743115006 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000134313|Q9ULH0-4|KIDINS220', 'KIDINS220|p.Q48Hfs*6|1|0.26|ENSG00000134313|chr2:8818756-8818758|CCT/AA|frameshift_variant', 'ENSG00000134313|ENST00000256707|KIDINS220', 'nc|ENSG00000134313|Q9ULH0-2|KIDINS220', 'ENST00000488729.5_1_2:8870852-8965899:-|nuORF', 'nc|ENSG00000134313|Q9ULH0-3|KIDINS220'] 32040 8841 GEVLDPTAA True H1975_Epitope_Rep2 871.4287122928699 871.42760993586 38.973 2 0.03980280086846352 0.005917573328984461 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1', 'RUSF1|p.Q301H|1|0.38|ENSG00000140688|chr16:31493658-31493658|C/G|missense_variant', 'ENST00000541442.5_1_16:31504873-31505170:-|nuORF', 'ENST00000567673.5_1_16:31504873-31508265:-|nuORF'] 89305 7171 RELTPQVVSA True NCI_RA007_Epitope_Rep5 1098.6033226099 1098.6022299358601 34.258 2 0.03979646334049854 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 26130 10133 FHGPGEAL True PC9_epitope_Rep5 826.3973525949399 826.3962499358599 43.961 2 0.039785017403120286 0.005917573328984461 0.9438714419765777 ['ENSG00000277150|ENST00000622749|F8A3'] 57114 5622 LEENPDPSA True H1975_Epitope_Rep3 970.4243551884199 970.4238049679301 26.661 1 0.039779878103180025 0.005917573328984461 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF', 'ENST00000424089.5_1_2:86315699-86317049:-|nuORF'] 120285 16778 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 69.543 2 0.03977511291287241 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 125955 10064 VPAGGAVAV True PC9_epitope_Rep1 739.42283906679 739.42229496793 43.581 1 0.03976434764134799 0.005917573328984461 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 31553 9979 GEFQSFSSA True NCI_RA007_Epitope_Rep3 958.4032258210199 958.40212993586 46.336 2 0.03975555717516734 0.005917573328984461 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 84887 22201 QHSEIFWLL True PC9_epitope_Rep2 1171.60259433391 1171.6014899358602 90.878 2 0.03975070236079534 0.005917573328984461 0.9438714419765777 ['ENST00000565925.5_1_16:81015450-81030931:-|nuORF', 'ENST00000569187.5_1_16:81015453-81040468:-|nuORF'] 118375 5773 VDITTPKAA True NCI_RA007_Epitope_Rep3 914.5072969667399 914.50618993586 29.689 2 0.03974749339542329 0.005917573328984461 0.9438714419765777 ['ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'PSIP1|p.K246Afs*3|1|0.34|ENSG00000164985|chr9:15474127-15474131|TCTTT/-|frameshift_variant', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000422292.2_1_9:15055292-15055805:+|nuORF'] 47608 20452 IYPATIASI True PC9_epitope_Rep1 947.53278343859 947.53168993586 83.478 2 0.039743973787518094 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000205571|Q16637-4|SMN1', 'nc|ENSG00000205571|Q16637-2|SMN1', 'nc|ENSG00000205571|Q16637-3|SMN1', 'ENSG00000205571|ENST00000380743|SMN2', 'ENSG00000172062|ENST00000380707|SMN1'] 48986 9842 KFDQLLAEEK True PC9_epitope_Rep4 1219.6448530687096 1219.6437499358601 45.506 2 0.03973023361432043 0.005917573328984461 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 74127 12697 NHVTPPNVSL True PC9_epitope_Rep5 1076.56145779792 1076.56087496793 53.844 1 0.039728870870201737 0.005917573328984461 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 53393 10243 KVDSNGVITV True PC9_epitope_Rep2 1030.56587447202 1030.56476993586 44.734 2 0.03972832253786068 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'nc|ENSG00000011143|Q9NXB0-2|MKS1'] 2586 10624 AESEITIAP True H1975_Epitope_Rep2 929.4705771048499 929.47002496793 45.889 1 0.03971881094816766 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF', 'ENST00000462327.1_1_10:120889049-120892241:+|nuORF'] 9645 17009 AYGHFSYEF True PC9_epitope_Rep4 1119.46616043075 1119.4650699358601 73.418 2 0.039711529623246575 0.005917573328984461 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 57736 7622 LENMPSAEA True H1975_Epitope_Rep2 960.4222470134399 960.42114993586 34.271 2 0.03968428678623747 0.005917573328984461 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 80640 18501 PLPPLPPPP True PC9_epitope_Rep2 923.5480395799099 923.54694993586 76.5 2 0.03967921069496211 0.005917573328984461 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 25204 8676 FEADPPGQVA True H1975_Epitope_Rep3 1029.47672511445 1029.4761749679299 38.37 1 0.03967681772420285 0.005917573328984461 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 21013 7321 ERAQGVVL True PC9_epitope_Rep2 870.4923156089399 870.49120993586 33.543 2 0.03964600187522306 0.005917573328984461 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 10086 9448 AYVHM[Oxidation]VTHF True PC9_epitope_Rep3 1119.5171508382302 1119.51604993586 41.283 2 0.03964144369570128 0.005917573328984461 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 135711 13108 YEIPSNLTP True H1975_Epitope_Rep1 1032.51277627 1032.51227496793 55.509 1 0.03962657861138432 0.005917573328984461 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 103884 20604 SRLGLPLLL True PC9_epitope_Rep4 980.63825156664 980.63714993586 87.407 2 0.039624003302685055 0.005917573328984461 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 110367 23530 TILPAIILV True PC9_epitope_Rep2 951.63685458431 951.63574993586 95.983 2 0.03962202183644761 0.005917573328984461 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 118615 2979 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 15.734 2 0.03960448274282392 0.005917573328984461 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 73253 7196 NEIDAEPPA True H1975_Epitope_Rep3 954.42944056886 954.42834993586 32.654 2 0.03960235949368445 0.005917573328984461 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 102355 5724 SPVFTSRSAA True PC9_epitope_Rep4 1021.51925863277 1021.51816993586 28.843 2 0.03955724575867805 0.005917573328984461 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 105407 12244 SVAEGRALMSV True PC9_epitope_Rep4 1118.5753936099 1118.5742899358602 54.913 2 0.03955480683916178 0.005917573328984461 0.9438714419765777 ['ENST00000506965.5_1_5:176942058-176943946:-|nuORF', 'ENST00000503078.5_1_5:176938794-176943460:-|nuORF', 'ENSG00000183258|ENST00000330503|DDX41'] 13767 12210 DQNLTPKL True PC9_epitope_Rep5 927.50254593947 927.50144993586 51.951 2 0.03955313784677698 0.005917573328984461 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 21694 9329 ERYKEVAEL True PC9_epitope_Rep1 1135.5873381925899 1135.58569490379 40.74 3 0.03955044043627655 0.005917573328984461 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 105832 14358 SVIQGHQIIAV True PC9_epitope_Rep4 1163.66625721963 1163.6651699358601 63.135 2 0.03953235354166203 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 94414 19135 RYFDVGLHNF True PC9_epitope_Rep5 1266.6145559999397 1266.6134499358602 78.638 2 0.0395203563174208 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000054392|Q5VTY9-6|HHAT', 'nc|ENSG00000054392|Q5VTY9-5|HHAT', 'nc|ENSG00000054392|Q5VTY9-2|HHAT', 'ENSG00000054392|ENST00000261458|HHAT', 'nc|ENSG00000054392|Q5VTY9-7|HHAT', 'nc|ENSG00000054392|Q5VTY9-3|HHAT'] 89488 4997 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.63469490379 24.306 3 0.039515026758962124 0.005917573328984461 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 8553 7826 ATYYGAFIKK True NCI_RA007_Epitope_Rep4 1160.6229954253197 1160.6213549037902 36.794 3 0.03949944850908212 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 119983 17398 VFAGVFNTF True NCI_RA007_Epitope_Rep3 1000.50181766348 1000.50072993586 76.336 2 0.0394885865830502 0.005917573328984461 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 29304 16046 FVDPNGKISL True PC9_epitope_Rep2 1088.5866099165999 1088.58550993586 66.978 2 0.03948339373054331 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 98318 10036 SIGGILAS True NCI_RA007_Epitope_Rep1 716.40685464948 716.40630496793 43.046 1 0.0394804223123897 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 23706 17975 EYIKFLRSI True PC9_epitope_Rep2 1167.6651945904698 1167.6640899358601 74.444 2 0.039469411154637334 0.005917573328984461 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 17753 10206 EHTPSALAI True PC9_epitope_Rep6 937.4868958753299 937.48578993586 49.902 2 0.039465978483359684 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000566146.1_1_16:30080209-30080764:+|nuORF'] 96491 14251 SELAGLLSA True NCI_RA007_Epitope_Rep3 859.46509780159 859.46400993586 63.369 2 0.039465351341571364 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 104828 18498 STEDIHCLIP True H1975_Epitope_Rep2 1126.53286009158 1126.5317699358602 76.755 2 0.03945703305041221 0.005917573328984461 0.9438714419765777 ['ENST00000549034.1_1_12:56383771-56384735:+|nuORF'] 127099 11745 VQASHFEGL True PC9_epitope_Rep5 986.4821448480599 986.48104993586 50.177 2 0.03942211128795969 0.005917573328984461 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 91853 8676 RPNPPPVSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 38.211 2 0.03941787953024982 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 132187 14343 VYKAFVDNY True PC9_epitope_Rep1 1117.54441075145 1117.5433099358602 59.994 2 0.03940539919995778 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 61729 21583 LLIPGLATA True PC9_epitope_Rep2 867.54295419947 867.54184993586 88.491 2 0.03939390166647986 0.005917573328984461 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 120305 16223 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 67.22 2 0.039343250783933935 0.005917573328984461 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 107669 19014 TAISLFYEL True NCI_RA007_Epitope_Rep3 1055.5539128059902 1055.55337496793 83.073 1 0.039339401301924856 0.005917573328984461 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 34529 6581 GQEDHYNNL True PC9_epitope_Rep5 1088.45230127176 1088.4517749679299 30.284 1 0.039330832174308494 0.005917573328984461 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 64023 7078 LQDAIREV True NCI_RA007_Epitope_Rep2 942.51344497634 942.51234993586 32.156 2 0.039330771911872515 0.005917573328984461 0.9438714419765777 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ARHGEF2|p.P672Qfs*7|2|0.14|ENSG00000116584|chr1:155952207-155952207|C/-|frameshift_variant'] 96837 9833 SESLIKQIP True H1975_Epitope_Rep3 1013.57571087973 1013.5746099358599 42.852 2 0.03932007090609888 0.005917573328984461 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 118084 7184 VATVSLPR True NCI_RA007_Epitope_Rep4 841.5021520166499 841.50104993586 34.255 2 0.03931143459299923 0.005917573328984461 0.9438714419765777 ['CON__P00761'] 45974 5653 ISSSSFSR True PC9_epitope_Rep5 869.42429561877 869.42318993586 26.743 2 0.03930877975537165 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 135899 9196 YESSTASALVA True NCI_RA007_Epitope_Rep5 1097.52406922969 1097.5229699358601 42.023 2 0.03930338551198044 0.005917573328984461 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 135869 11399 YERPVDYLP True NCI_RA007_Epitope_Rep4 1150.5658744720197 1150.56476993586 50.762 2 0.039296588509748306 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 6264 4720 APRPPTAAP True PC9_epitope_Rep4 876.4817509252399 876.48064993586 24.7 2 0.0392919751736026 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ENSG00000184939|ENST00000563169|ZFP90'] 112926 22796 TPQSIFIFA True PC9_epitope_Rep5 1022.5436824754598 1022.5431749679301 92.676 1 0.03928726121682723 0.005917573328984461 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 70789 10234 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42662993586 44.308 2 0.03928350127298318 0.005917573328984461 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 17491 16023 EHGSDVYLL True PC9_epitope_Rep1 1031.49237517859 1031.4912699358601 66.445 2 0.03927147577354998 0.005917573328984461 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'GTF2IRD1|p.R129W|1|0.26|ENSG00000006704|chr7:74515560-74515560|C/T|missense_variant'] 77587 10417 NYTARFSRF True PC9_epitope_Rep2 1160.57269118796 1160.5710449037902 45.391 3 0.03925862625889239 0.005917573328984461 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 75799 9148 NRAQIQTVI True PC9_epitope_Rep6 1041.59309227937 1041.59198993586 45.298 2 0.03924805401813302 0.005917573328984461 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1'] 35580 17515 GTINNLIHV True PC9_epitope_Rep1 979.5450794577899 979.5439899358599 72.165 2 0.039245186735429254 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000131791|O43741-2|PRKAB2', 'ENSG00000131791|ENST00000254101|PRKAB2'] 85504 23170 QLIPIFTDV True PC9_epitope_Rep1 1044.58554728744 1044.5849749679298 93.918 1 0.03920576320886802 0.005917573328984461 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 127148 13510 VQDRFEVNV True PC9_epitope_Rep2 1104.55637241748 1104.55526993586 57.253 2 0.039190461668344924 0.005917573328984461 0.9438714419765777 ['ENSG00000123136|ENST00000242776|DDX39A', 'ENST00000588692.5_1_19:14519750-14520718:-|nuORF', 'ENST00000587730.5_1_19:14519750-14520297:-|nuORF'] 11958 17980 DHTAPLLL True PC9_epitope_Rep3 878.48616759934 878.48506993586 74.363 2 0.03916792868004983 0.005917573328984461 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 48650 6650 KELAETIAA True H1975_Epitope_Rep2 944.5178616504398 944.51676993586 30.487 2 0.03914853166411115 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 94819 20223 RYLTVAAVF True PC9_epitope_Rep3 1038.5862159937797 1038.5851099358601 83.048 2 0.03913542793154189 0.005917573328984461 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 132895 19237 VYTSVVEEL True PC9_epitope_Rep4 1037.5280919809697 1037.52757496793 82.095 1 0.03913309917095358 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 88278 19153 QYGGDLTNTF True PC9_epitope_Rep1 1114.49310345458 1114.4925749679298 78.466 1 0.03911476130921239 0.005917573328984461 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 31018 22352 GAVDPLLAL True PC9_epitope_Rep5 867.50656869075 867.5060249679301 90.986 1 0.039111357110755016 0.005917573328984461 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 54587 14325 LADALQELR True PC9_epitope_Rep2 1027.56620882519 1027.5651099358602 60.365 2 0.039075033056602655 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 139526 20161 YTLDGGDIINA True PC9_epitope_Rep3 1150.5506183307 1150.5495299358602 82.803 2 0.03906465521818974 0.005917573328984461 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 26468 19775 FIPPDGNFRL True PC9_epitope_Rep3 1174.61349337078 1174.6123899358602 81.293 2 0.039058168740839144 0.005917573328984461 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 131912 16678 VYENVSHFL True PC9_epitope_Rep4 1106.53965972418 1106.53856993586 72.127 2 0.039053359636623326 0.005917573328984461 0.9438714419765777 ['ENSG00000164933|ENST00000297578|SLC25A32'] 21711 7032 ERYKEVAEL True PC9_epitope_Rep6 1135.5873381925899 1135.58624993586 36.049 2 0.03903615910493256 0.005917573328984461 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 102660 17631 SQDLVYETV True PC9_epitope_Rep5 1052.50260550912 1052.50207496793 72.829 1 0.03903378362794469 0.005917573328984461 0.9438714419765777 ['ENST00000484629.1_1_3:47312946-47318864:-|nuORF', 'ENST00000487440.5_1_3:47281337-47324087:-|nuORF', 'nc|ENSG00000088727|Q9HAQ2-2|KIF9', 'ENSG00000088727|ENST00000684063|KIF9'] 139707 11308 YTVEDTHYV True PC9_epitope_Rep2 1125.49785448185 1125.4967499358602 48.818 2 0.03902811967043775 0.005917573328984461 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 103431 10880 SQYPVNHLV True PC9_epitope_Rep4 1055.53999407735 1055.5388899358602 49.615 2 0.03900945938271795 0.005938518863530508 0.9438714419765777 ['ENSG00000131037|ENST00000201647|EPS8L1'] 114144 9383 TRSPSVCL True PC9_epitope_Rep5 861.4378375079299 861.43674993586 41.046 2 0.03900673201344566 0.005938518863530508 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF', 'ECE1|p.V239Mfs*13|1|0.31|ENSG00000117298|chr1:21258737-21258740|AGAC/-|frameshift_variant'] 102368 17666 SPVLPLTSA True PC9_epitope_Rep4 883.50148331031 883.50038993586 75.979 2 0.038983953852941115 0.005938518863530508 0.9438714419765777 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1'] 34647 17868 GQISEVVVV True PC9_epitope_Rep4 928.5229470308799 928.52184993586 76.769 2 0.03898015350662742 0.005938518863530508 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 97670 9227 SHDFYSHEL True PC9_epitope_Rep2 1133.4777877436102 1133.47615490379 40.832 3 0.038914258187796376 0.005938518863530508 0.9438714419765777 ['ENSG00000095015|ENST00000399503|MAP3K1', 'MAP3K1|p.T946Kfs*22|1|0.62|ENSG00000095015|chr5:56882037-56882037|C/-|frameshift_variant', 'MAP3K1|p.T947Nfs*56|1|0.61|ENSG00000095015|chr5:56882039-56882040|AC/-|frameshift_variant'] 5768 7101 APELAPLK True H1975_Epitope_Rep3 837.4960040070499 837.49490993586 32.284 2 0.03890735351941866 0.005938518863530508 0.9438714419765777 ['nc|ENSG00000125868|P60981-2|DSTN', 'ENSG00000125868|ENST00000246069|DSTN'] 44774 10408 IPTENSMTA True PC9_epitope_Rep5 962.43789707758 962.43678993586 45.02 2 0.0388983604960798 0.005938518863530508 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 31551 10395 GEFQSFSSA True NCI_RA007_Epitope_Rep2 958.4032258210199 958.40212993586 45.025 2 0.03889772603485912 0.005938518863530508 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 27016 20085 FLLPHPGLQV True PC9_epitope_Rep2 1119.6440652230701 1119.64296993586 82.665 2 0.038892856185313095 0.005938518863530508 0.9438714419765777 ['ENSG00000184743|ENST00000398868|ATL3'] 42063 4148 IEEELGSK True H1975_Epitope_Rep1 903.4549270407099 903.45382993586 20.885 2 0.03888998631050114 0.005938518863530508 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 24091 5197 EYRKKMDIPAK True NCI_RA007_Epitope_Rep5 1377.74385591733 1377.74221490379 26.687 3 0.03887959498888635 0.005938518863530508 0.9438714419765777 ['nc|ENSG00000116747|P10155-3|RO60', 'nc|ENSG00000116747|P10155-5|RO60', 'nc|ENSG00000116747|P10155-4|RO60', 'ENSG00000116747|ENST00000400968|RO60'] 91756 6475 RPKPIITSV True PC9_epitope_Rep4 1009.62841515893 1009.62730993586 32.021 2 0.038871068323236745 0.005938518863530508 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 49033 8708 KFIDTTSKF True PC9_epitope_Rep6 1085.57571087973 1085.57460993586 43.352 2 0.03886986090704532 0.005938518863530508 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 45972 5725 ISSSSFSR True PC9_epitope_Rep1 869.42429561877 869.42318993586 26.842 2 0.03886009238239718 0.005938518863530508 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 29414 24224 FVFPGELLL True PC9_epitope_Rep1 1033.5848190114498 1033.58427496793 97.995 1 0.03883820636811698 0.005938518863530508 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 95016 17018 RYQQWMERF True PC9_epitope_Rep1 1342.6240751378198 1342.62296993586 70.283 2 0.03882048293073639 0.005938518863530508 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 75766 5212 NRAPNTAEL True PC9_epitope_Rep2 984.4988575413599 984.49776993586 25.438 2 0.03881795314782404 0.005938518863530508 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 119589 10261 VERPTVLP True H1975_Epitope_Rep3 909.5283667644899 909.52726993586 44.518 2 0.038808715391412264 0.00595875424794004 0.9438714419765777 ['KCNQ3|p.T740R|1|0.67|ENSG00000184156|chr8:132129662-132129662|G/C|missense_variant', 'ENST00000519589.1_1_8:133141511-133152462:-|nuORF', 'nc|ENSG00000184156|O43525-2|KCNQ3', 'KCNQ3|p.D843Gfs*102|1|0.69|ENSG00000184156|chr8:132129354-132129355|CC/TCCG|frameshift_variant', 'ENSG00000184156|ENST00000388996|KCNQ3'] 47671 11467 IYPQVLHSL True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 52.225 2 0.03880458951018922 0.00595875424794004 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 118350 8095 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep2 964.4688036634799 964.46770993586 36.121 2 0.038802602112375774 0.00595875424794004 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 71634 24367 MLPLLAALL True PC9_epitope_Rep3 953.5983609006099 953.59781496793 99.042 1 0.03880002388882958 0.00595875424794004 0.9438714419765777 ['ENSG00000249992|ENST00000503771|TMEM158'] 30132 17410 FYQPKIQQF True PC9_epitope_Rep1 1197.61824439805 1197.6171499358602 71.766 2 0.03879572447643667 0.00595875424794004 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 43501 9354 IIALDGDTK True PC9_epitope_Rep2 944.51786165044 944.51676993586 41.316 2 0.03879516615814578 0.00595875424794004 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 123173 9958 VHGPPVQL True PC9_epitope_Rep4 845.47593726881 845.47484993586 45.96 2 0.038787374397245174 0.00595875424794004 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 4281 14864 AIITGFRNV True PC9_epitope_Rep2 989.56581490237 989.56470993586 62.437 2 0.03878501246140431 0.00595875424794004 0.9438714419765777 ['nc|ENSG00000156970|O60566-3|BUB1B', 'nc|ENSG00000156970|O60566-2|BUB1B', 'MARK2-BUB1B|1|fusion', 'ENSG00000156970|ENST00000287598|BUB1B'] 40892 8455 HVQNMIKGV True PC9_epitope_Rep1 1024.5487849392398 1024.54768993586 37.358 2 0.03878050044128347 0.00595875424794004 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000439124.1_1_6:64325734-64326112:-|nuORF', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000514842.5_1_4:39459094-39460113:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 43417 15946 IHSEPLGVVL True PC9_epitope_Rep6 1062.60734536118 1062.6062499358602 73.633 2 0.03877712199231734 0.00595875424794004 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1'] 70505 11537 LYTEKFEEF True NCI_RA007_Epitope_Rep3 1204.5652057656796 1204.5641099358602 52.509 2 0.03877674550390741 0.00595875424794004 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 112969 19368 TPSIPVLTA True PC9_epitope_Rep4 897.51713337445 897.51602993586 82.61 2 0.038774169894649685 0.00595875424794004 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 132889 13791 VYTSVVEEL True NCI_RA007_Epitope_Rep5 1037.5280919809697 1037.52698993586 59.723 2 0.038759625235839756 0.00595875424794004 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 111376 19727 TLISELVQA True PC9_epitope_Rep6 972.5491617787198 972.54806993586 88.538 2 0.03875931518648684 0.00595875424794004 0.9438714419765777 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 70637 4930 MAQTDPETND True PC9_epitope_Rep5 1120.43426824912 1120.4331699358602 24.0 2 0.03874555913407247 0.00595875424794004 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 106649 19271 SYADAFQFL True NCI_RA007_Epitope_Rep5 1060.4865615221602 1060.48546993586 80.994 2 0.038740355771770575 0.00595875424794004 0.9438714419765777 ['ENSG00000242732|ENST00000609883|RTL5'] 67227 12007 LTDLVDDNY True H1975_Epitope_Rep1 1066.48187006454 1066.48127496793 51.193 1 0.03873905812864468 0.00595875424794004 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 71067 5399 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 25.8 2 0.038723716465685724 0.00595875424794004 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 76117 16741 NRPILVAL True PC9_epitope_Rep1 894.56508662638 894.56398993586 69.222 2 0.03872006427898772 0.00595875424794004 0.9438714419765777 ['ENST00000361875.7_1_3:150176295-150176361:+|nuORF'] 116919 13751 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47054993586 60.789 2 0.03870658233381379 0.00595875424794004 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 18167 16988 EIPLTLHSV True PC9_epitope_Rep2 1007.56514619603 1007.56404993586 70.594 2 0.038696852475132645 0.00595875424794004 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant', 'BAZ1B|p.E690V|1|0.47|ENSG00000009954|chr7:73477392-73477392|T/A|missense_variant'] 19563 13044 ELRARQLEL True PC9_epitope_Rep2 1126.64585612822 1126.64422490379 55.453 3 0.03869061345914732 0.00595875424794004 0.9438714419765777 ['ENST00000557266.5_1_15:91500194-91504996:+|nuORF', 'ENSG00000166965|ENST00000394258|RCCD1', 'ENST00000555737.5_1_15:91500194-91503934:+|nuORF'] 132045 15603 VYIDQTMVL True NCI_RA007_Epitope_Rep5 1080.5525329069999 1080.5514299358601 66.726 2 0.03868057056870191 0.00598063855533836 0.9438714419765777 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 26199 11191 FHTDPEAL True PC9_epitope_Rep3 928.42904664604 928.4279499358599 48.051 2 0.038674660068337675 0.00598063855533836 0.9438714419765777 ['nc|ENSG00000187624|Q6ZQX7-2|LIAT1', 'ENSG00000187624|ENST00000360127|C17orf97', 'nc|ENSG00000187624|Q6ZQX7-3|LIAT1', 'nc|ENSG00000187624|Q6ZQX7|LIAT1'] 2785 13018 AEVDDILAA True H1975_Epitope_Rep1 915.4549270407099 915.4543749679301 55.157 1 0.03867002434192134 0.00598063855533836 0.9438714419765777 ['ENSG00000132330|ENST00000254663|SCLY', 'ENST00000482031.5_1_2:238973007-238991399:+|nuORF', 'nc|ENSG00000132330|Q96I15-2|SCLY'] 102263 5298 SPTKNNIAV True PC9_epitope_Rep5 942.5134449763399 942.51234993586 25.392 2 0.038667617737547656 0.00598063855533836 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 77619 11646 NYVEVTRKW True PC9_epitope_Rep3 1193.61930702721 1193.61766490379 49.811 3 0.0386576677348314 0.00598063855533836 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1'] 87975 10088 QVRDVIIAA True PC9_epitope_Rep6 983.5763795860698 983.57528993586 49.405 2 0.03864325046697225 0.00598063855533836 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 70546 20214 LYVGKIPGF True PC9_epitope_Rep1 992.5695033004798 992.56840993586 82.582 2 0.038635667541862755 0.00598063855533836 0.9438714419765777 ['ENST00000488620.5_1_9:116327559-116353744:+|nuORF'] 31414 19395 GEDFLSWNDL True H1975_Epitope_Rep2 1194.51931820242 1194.51822993586 80.497 2 0.03862909245213456 0.00598063855533836 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.R772Pfs*13|1|0.15|ENSG00000183856|chr1:156544452-156544462|CCTATAACCCC/-|frameshift_variant'] 123322 11331 VHTIVNETL True PC9_epitope_Rep4 1024.55530978832 1024.5542099358602 51.364 2 0.03862687889111078 0.00598063855533836 0.9438714419765777 ['ENSG00000023516|ENST00000025301|AKAP11', 'AKAP11|p.S1150Rfs*7|1|0.23|ENSG00000023516|chr13:42302192-42302195|TGTC/-|frameshift_variant'] 124318 13697 VLDPNTVFA True H1975_Epitope_Rep3 974.50729696674 974.5067449679301 57.979 1 0.03862603847413931 0.00598063855533836 0.9438714419765777 ['CON__P34955'] 17233 13441 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50708496793 63.39 1 0.038615584855037924 0.0060034904013961604 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 46818 14290 IVDSLTEMY True H1975_Epitope_Rep2 1069.5001629809701 1069.49906993586 60.116 2 0.03860265406472541 0.0060034904013961604 0.9438714419765777 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant'] 95385 10006 SAIGLADPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43778993586 46.451 2 0.03860183983652491 0.0060034904013961604 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 136541 5634 YHSEGETL True PC9_epitope_Rep3 934.40322582102 934.40212993586 26.748 2 0.03859583307398997 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF', 'USP54|p.S1440*|1|0.29|ENSG00000166348|chr10:73500821-73500831|CCTCACGTTTG/-|frameshift_variant'] 115471 14664 TVFTDHM[Oxidation]LTV True PC9_epitope_Rep6 1178.5641606002998 1178.56306993586 68.329 2 0.038584392696657886 0.006019755955839628 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1', 'nc|ENSG00000060982|P54687-2|BCAT1', 'nc|ENSG00000060982|P54687-3|BCAT1'] 97565 11310 SGVSLAALK True PC9_epitope_Rep2 844.50181766348 844.50072993586 48.827 2 0.038554596044179115 0.006019755955839628 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 74212 16155 NIDLVSKLLY True H1975_Epitope_Rep2 1176.675424921 1176.6743299358602 67.351 2 0.038550891988809496 0.006019755955839628 0.9438714419765777 ['ENSG00000188419|ENST00000357749|CHM', 'ENSG00000203668|ENST00000366553|CHML'] 88963 3733 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 18.873 2 0.038541396331124564 0.006019755955839628 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 65754 21412 LSIEQLTTL True PC9_epitope_Rep4 1016.5753765265599 1016.57426993586 90.537 2 0.03850915473801042 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 135901 13518 YESSTASALVA True PC9_epitope_Rep1 1097.52406922969 1097.5229699358601 56.853 2 0.03849953645449169 0.006019755955839628 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 32984 10332 GIVEFASK True PC9_epitope_Rep2 849.45961849833 849.45852993586 45.069 2 0.03848189572241957 0.006019755955839628 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 17282 10859 EHDGSLFQA True PC9_epitope_Rep2 1002.4406739589 1002.43956993586 47.087 2 0.03848069906213835 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 42951 5796 IGAEVYHNLK True H1975_Epitope_Rep3 1142.60840799034 1142.60730993586 27.318 2 0.03845633029586616 0.006019755955839628 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 67029 19467 LTAPALALA True PC9_epitope_Rep4 839.5116540711899 839.51054993586 82.996 2 0.03845266870919772 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 8022 7274 ATDRFRSLY True H1975_Epitope_Rep2 1127.5723568347898 1127.57071490379 32.915 3 0.0384496367903974 0.006019755955839628 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-10|DST'] 17216 14520 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 63.766 2 0.038449014039497804 0.006019755955839628 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 3892 8205 AHDDGRWSL True PC9_epitope_Rep6 1055.47845644995 1055.47734993586 41.134 2 0.03843780693837406 0.006019755955839628 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 130701 14687 VVDGNFEEV True PC9_epitope_Rep4 1006.46074069714 1006.4596499358599 64.428 2 0.038437626656052486 0.006019755955839628 0.9438714419765777 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 75491 19303 NQINGSFAL True PC9_epitope_Rep5 962.48214484806 962.48159496793 79.294 1 0.03843140332571117 0.006019755955839628 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 2772 7462 AEVDAAMAA True H1975_Epitope_Rep3 847.3745685450299 847.3740149679301 33.682 1 0.03842111081581228 0.006019755955839628 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 118641 5283 VEAPPPSSP True H1975_Epitope_Rep3 879.43379767331 879.43270993586 25.403 2 0.03840749725859733 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 17533 7698 EHINSVSAM True PC9_epitope_Rep3 986.44913046762 986.44802993586 34.606 2 0.03839310385250902 0.006019755955839628 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 88974 3573 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 18.644 2 0.038381545989422075 0.006019755955839628 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 2687 11517 AETAVSVIP True H1975_Epitope_Rep3 885.48074786573 885.47964993586 49.425 2 0.038378886295970686 0.006019755955839628 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 35800 21344 GTYDIFYTA True PC9_epitope_Rep1 1049.47057710485 1049.46948993586 86.93 2 0.03837374000958712 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 46871 13748 IVGPDGLVY True H1975_Epitope_Rep3 931.50148331031 931.5009349679301 58.179 1 0.03835885246504826 0.006019755955839628 0.9438714419765777 ['ENSG00000105202|ENST00000221801|FBL'] 75298 19258 NPTLILAA True PC9_epitope_Rep2 811.4803539429099 811.47924993586 79.45 2 0.03835838655063389 0.006019755955839628 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 1694 5477 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 26.086 2 0.03835390714076964 0.006019755955839628 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 39531 17882 HPFGFVAV True PC9_epitope_Rep2 872.4544735482399 872.45336993586 74.085 2 0.03833568419045662 0.006019755955839628 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 25211 9136 FEADPPGQVAA True H1975_Epitope_Rep3 1100.51383889916 1100.51274993586 40.131 2 0.0383225742297806 0.006019755955839628 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 100477 12685 SLPKGVVEV True PC9_epitope_Rep1 926.54368247546 926.54258993586 53.664 2 0.03832026841901494 0.006019755955839628 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 85278 6054 QKSLSLSPG True NCI_RA007_Epitope_Rep1 915.5025459394699 915.50144993586 27.587 2 0.03830045095083576 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 45884 13645 ISQVQVVL True NCI_RA007_Epitope_Rep4 884.5331177917599 884.53256496793 59.706 1 0.03828722568986381 0.006019755955839628 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5', 'nc|ENSG00000197442|Q99683-2|MAP3K5'] 115610 5696 TVINQTQKENL True NCI_RA007_Epitope_Rep3 1286.6830294825797 1286.6819299358601 29.383 2 0.038286112897362876 0.006019755955839628 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 69923 19936 LYDIVFKHF True PC9_epitope_Rep1 1180.6280808057602 1180.62643490379 81.504 3 0.0382762886685313 0.006019755955839628 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 74622 13560 NLEEISNYY True H1975_Epitope_Rep2 1143.50841916555 1143.50732993586 57.296 2 0.0382386461405416 0.006019755955839628 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L'] 103829 10442 SRIARALAL True PC9_epitope_Rep2 969.6083484206899 969.60724993586 45.486 2 0.03823317551054656 0.006019755955839628 0.9438714419765777 ['ENSG00000142871|ENST00000451137|CCN1'] 116610 21636 TYGPSFPAF True PC9_epitope_Rep1 985.4545331178899 985.4539849679301 88.049 1 0.03821373892480403 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'RALGAPB|p.V262F|1|0.49|ENSG00000170471|chr20:38509120-38509120|G/T|missense_variant'] 119668 8442 VESPESLAA True H1975_Epitope_Rep3 901.4392769765699 901.43872496793 37.458 1 0.038185611131704274 0.006019755955839628 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 117163 9779 TYSTEPNNL True PC9_epitope_Rep4 1037.46655435357 1037.46544993586 45.255 2 0.038167166263253664 0.006019755955839628 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 40107 7539 HRDGEFQEL True PC9_epitope_Rep2 1129.51523588149 1129.51360490379 34.365 3 0.03815745682371803 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000136146|Q9NPJ6-2|MED4', 'ENSG00000136146|ENST00000258648|MED4'] 9997 15000 AYSTVPGYYSW True NCI_RA007_Epitope_Rep3 1292.57135377528 1292.5702499358601 66.465 2 0.03815686908216778 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000165806|P55210-4|CASP7', 'ENSG00000165806|ENST00000369318|CASP7', 'nc|ENSG00000165806|P55210-3|CASP7'] 96858 5382 SESPVTPSA True H1975_Epitope_Rep2 873.40797684829 873.4074249679301 25.738 1 0.03815373065937166 0.006019755955839628 0.9438714419765777 ['ENSG00000059691|ENST00000263985|GATB', 'ENST00000513504.1_1_4:152592328-152612815:-|nuORF'] 39730 11381 HPWETVTTAA True PC9_epitope_Rep2 1111.52982331647 1111.5287299358602 49.099 2 0.038144960644015354 0.006019755955839628 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 97680 5734 SHDHGYTTL True PC9_epitope_Rep5 1029.45157299577 1029.4504699358602 27.049 2 0.038096087723379746 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000099956|Q12824-2|SMARCB1'] 6592 19002 APWPPKGLVPA True PC9_epitope_Rep1 1131.64406522307 1131.64296993586 77.879 2 0.03806765112307397 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 41089 11712 HYLPDLHHL True PC9_epitope_Rep4 1143.5825275956702 1143.5808749037901 52.813 3 0.03806036361536921 0.006019755955839628 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 139979 19954 YVITDLTQL True PC9_epitope_Rep6 1064.57537652656 1064.5748749679299 89.415 1 0.038057843158789635 0.006019755955839628 0.9438714419765777 ['ENSG00000134070|ENST00000256458|IRAK2'] 41603 23802 IDFPGGILSF True PC9_epitope_Rep3 1064.55424715916 1064.5531499358601 96.841 2 0.038055347478680994 0.006019755955839628 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 113081 5375 TPYKQEINA True PC9_epitope_Rep4 1062.53457434374 1062.53346993586 27.4 2 0.038050956338776795 0.006019755955839628 0.9438714419765777 ['ENSG00000138356|ENST00000374700|AOX1'] 24278 13208 FAAGIIAHL True H1975_Epitope_Rep2 911.5228874612301 911.5217899358599 55.932 2 0.03805092207711592 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000203995|Q6WRX3-2|ZYG11A', 'ENSG00000203995|ENST00000371528|ZYG11A', 'ENSG00000162378|ENST00000294353|ZYG11B', 'nc|ENSG00000162378|Q9C0D3-2|ZYG11B'] 113729 9601 TRDEVTGEAAL True PC9_epitope_Rep5 1160.567331024 1160.56622993586 41.892 2 0.03804977184793396 0.006019755955839628 0.9438714419765777 ['nc|ENSG00000169696|Q9BZE9-3|ASPSCR1', 'ENSG00000169696|ENST00000306739|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-2|ASPSCR1', 'nc|ENSG00000169696|Q9BZE9-4|ASPSCR1'] 1198 8570 AEDEAAALP True H1975_Epitope_Rep2 885.4079768482899 885.4074249679301 37.917 1 0.03804458780606559 0.006019755955839628 0.9438714419765777 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 26471 18949 FIPPDGNFRL True PC9_epitope_Rep4 1174.61349337078 1174.6123899358602 80.975 2 0.03800609407412411 0.006038507095245837 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 130698 15377 VVDGNFEEV True PC9_epitope_Rep2 1006.46074069714 1006.4596499358599 64.43 2 0.03799811112321499 0.006038507095245837 0.9438714419765777 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 91552 17825 RPAGALVALVV True PC9_epitope_Rep6 1064.67061432408 1064.66950993586 81.195 2 0.03796813413554747 0.006038507095245837 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 54282 11694 KYPNVFKKI True PC9_epitope_Rep3 1135.67536535135 1135.67371490379 50.001 3 0.037967974423747476 0.006038507095245837 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 111799 19593 TLRDGAALLL True PC9_epitope_Rep1 1041.61824439805 1041.6171499358602 80.193 2 0.03796193225988726 0.006038507095245837 0.9438714419765777 ['ENSG00000162227|ENST00000294168|TAF6L', 'ENST00000524976.5_1_11:62538888-62549806:+|nuORF', 'TAF6L|p.K357Sfs*93|1|0.4|ENSG00000162227|chr11:62786368-62786369|AA/-|frameshift_variant'] 18623 6554 ELALGQDR True PC9_epitope_Rep2 900.46649478392 900.46538993586 30.623 2 0.03795056907379035 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 2064 9686 AELGEAPVP True NCI_RA007_Epitope_Rep3 881.4494477374499 881.44834993586 45.176 2 0.03793172433938658 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 78194 8811 PAPPPPPPP True PC9_epitope_Rep3 865.46978925921 865.46868993586 38.841 2 0.037926297004214085 0.006038507095245837 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 96461 4093 SEIRAIRQA True NCI_RA007_Epitope_Rep4 1042.5883412521 1042.5872499358602 22.02 2 0.03791393691965308 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 36429 20904 GVIGGGVFQAI True PC9_epitope_Rep4 1016.5654805491998 1016.56438993586 88.567 2 0.03790705855868007 0.006038507095245837 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 79276 8684 PGHLQEGFG True PC9_epitope_Rep3 940.4402800360799 940.43918993586 38.352 2 0.03790454220798225 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 128489 22136 VSFGDFVQV True PC9_epitope_Rep5 996.4916469025999 996.49054993586 90.181 2 0.037900672560610284 0.006038507095245837 0.9438714419765777 ['ENSG00000166263|ENST00000376352|STXBP4', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 72615 5883 M[Oxidation]VVPAALK True NCI_RA007_Epitope_Rep5 843.4888108320699 843.48770993586 29.316 2 0.037899341523011026 0.006038507095245837 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 72237 10670 MRYNEKELQAL True PC9_epitope_Rep6 1393.70238502817 1393.70074490379 51.86 3 0.03789490923529325 0.006038507095245837 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 75496 22648 NQIPGLIWI True PC9_epitope_Rep4 1052.60186605792 1052.6007699358602 95.346 2 0.0378940452603056 0.006038507095245837 0.9438714419765777 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000493208.1_1_5:131825047-131826375:-|nuORF', 'ENSG00000125347|ENST00000245414|IRF1'] 7716 5270 ASREEILAQAK True PC9_epitope_Rep2 1214.66190011518 1214.66026490379 25.658 3 0.03789300963093258 0.006038507095245837 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 31343 13153 GEALDALRPW True H1975_Epitope_Rep3 1126.5771078620598 1126.5760099358602 55.841 2 0.037892967361443194 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 43982 20071 ILGPPPPSF True PC9_epitope_Rep3 923.51165407119 923.51054993586 82.454 2 0.03789008922008898 0.006038507095245837 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF', 'ENST00000511978.5_1_5:138651425-138655027:+|nuORF', 'ENST00000509918.5_1_5:138651425-138657594:+|nuORF'] 21172 9660 EREKWIHAL True PC9_epitope_Rep2 1180.63529144452 1180.6336349037902 42.496 3 0.037874117608302574 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 47037 17096 IVSNPVDILTY True H1975_Epitope_Rep3 1232.66525416012 1232.66414993586 71.378 2 0.03787278790283944 0.006038507095245837 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 72228 13316 MRYNEKELQAL True PC9_epitope_Rep1 1393.70238502817 1393.7012899358601 56.081 2 0.03786794329025208 0.006038507095245837 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 128488 21249 VSFGDFVQV True PC9_epitope_Rep4 996.4916469025999 996.49054993586 89.898 2 0.037867673455756284 0.006038507095245837 0.9438714419765777 ['ENSG00000166263|ENST00000376352|STXBP4', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 44218 16915 ILSKDGVLYV True PC9_epitope_Rep2 1105.63831113629 1105.63720993586 70.308 2 0.03786432611732583 0.006038507095245837 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000454465.1_1_2:87398353-87423749:+|nuORF'] 8232 15136 ATIIDILTK True NCI_RA007_Epitope_Rep2 986.60119735158 986.60010993586 63.564 2 0.03786389042283817 0.006038507095245837 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 89842 20110 RFLDDLGLKF True PC9_epitope_Rep4 1222.6710082468996 1222.66990993586 85.487 2 0.037857071322525526 0.006038507095245837 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 2109 4624 AELPSRTP True H1975_Epitope_Rep3 869.46068112749 869.45958993586 22.908 2 0.03784871526422948 0.006038507095245837 0.9438714419765777 ['ENSG00000198113|ENST00000357503|TOR4A'] 126785 15676 VPSPGLPVSA True PC9_epitope_Rep4 922.5123823471799 922.51128993586 68.224 2 0.03784433251489812 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 109198 8329 TFSVVPSPK True H1975_Epitope_Rep3 960.5280324113198 960.52692993586 37.022 2 0.0378412611804976 0.006038507095245837 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 86806 11304 QRNPQGFVL True PC9_epitope_Rep6 1057.5668775315298 1057.56578993586 54.499 2 0.03783930349436065 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 56785 14403 LEATINELV True H1975_Epitope_Rep1 1000.5440763982799 1000.54296993586 60.597 2 0.037838548969098405 0.006038507095245837 0.9438714419765777 ['nc|ENSG00000136810|P10599-2|TXN', 'ENSG00000136810|ENST00000374517|TXN', 'ENST00000441872.2_1_10:121442641-121442701:-|nuORF', 'ENST00000487892.1_1_9:113006439-113007258:-|nuORF'] 43206 5744 IGTVPVGR True NCI_RA007_Epitope_Rep2 797.47593726881 797.47484993586 26.96 2 0.03781588153568367 0.006038507095245837 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 86284 8033 QQDPQQYNV True PC9_epitope_Rep6 1118.49925146418 1118.49814993586 40.382 2 0.037815385448476506 0.006038507095245837 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 52524 5122 KPPPPPPPP True PC9_epitope_Rep3 922.5276384884999 922.52654993586 24.79 2 0.0378021089976536 0.006058214567568822 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 107236 10652 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59198993586 45.864 2 0.03779938927197675 0.006058214567568822 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 125725 21104 VNEQLYIL True PC9_epitope_Rep2 990.5385970950199 990.53750993586 86.635 2 0.037766057051882615 0.006058214567568822 0.9438714419765777 ['SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 137607 8645 YLTTAVITNK True NCI_RA007_Epitope_Rep2 1122.62847472858 1122.62736993586 38.273 2 0.03776190728642553 0.006058214567568822 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E'] 89490 5217 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.63469490379 25.135 3 0.03776138468383337 0.006058214567568822 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 103462 5647 SRAPDGAAL True PC9_epitope_Rep3 856.4402800360799 856.43918993586 26.798 2 0.03776070578063028 0.006058214567568822 0.9438714419765777 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 41143 21728 HYPYFLIV True PC9_epitope_Rep1 1050.5538532363398 1050.5527499358602 88.408 2 0.037759508570732916 0.006058214567568822 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 126812 6925 VPSSPLRAA True PC9_epitope_Rep4 896.50796567308 896.50686993586 33.866 2 0.037753644165393875 0.006058214567568822 0.9438714419765777 ['ENST00000372409.7_1_20:44563346-44566100:+|nuORF'] 1158 13013 AEASMVIAV True H1975_Epitope_Rep2 889.45790424617 889.4573549679301 55.174 1 0.03774077004674028 0.006058214567568822 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF', 'ENST00000545930.5_1_11:61091835-61095006:-|nuORF'] 33334 11805 GLDSGFHSV True PC9_epitope_Rep5 917.4242956187701 917.42318993586 50.404 2 0.037728852874883305 0.006058214567568822 0.9438714419765777 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000467201.5_1_7:100174858-100176198:-|nuORF'] 140419 13204 YYFEGIKQTF True NCI_RA007_Epitope_Rep4 1294.6233893481397 1294.6222899358602 57.911 2 0.03771832505644189 0.006058214567568822 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 30488 14236 GAGPSLLL True H1975_Epitope_Rep2 726.4275900940601 726.4270449679301 59.908 1 0.03770706331512909 0.006058214567568822 0.9438714419765777 ['ENSG00000109861|ENST00000227266|CTSC', 'ENST00000533865.5_1_11:88068232-88070840:-|nuORF', 'ENST00000534131.1_1_11:88068041-88070840:-|nuORF', 'nc|ENSG00000109861|P53634-2|CTSC', 'nc|ENSG00000109861|P53634-3|CTSC', 'ENST00000393301.4_1_11:88059607-88070840:-|nuORF'] 29146 19512 FTVAELKQL True PC9_epitope_Rep3 1047.59644632431 1047.5953499358602 80.284 2 0.03768028037117074 0.006058214567568822 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 36573 23480 GVLENIFGV True PC9_epitope_Rep3 946.5123823471798 946.51128993586 95.595 2 0.03767637477840724 0.006058214567568822 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 5668 20185 APALLLIPA True PC9_epitope_Rep6 877.56368964405 877.56258993586 90.315 2 0.03764879906136489 0.006058214567568822 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 47522 12954 IYLPEVRKI True PC9_epitope_Rep6 1129.68593003505 1129.68427490379 61.379 3 0.03763259135818655 0.006058214567568822 0.9438714419765777 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 74104 16734 NHVSSPFEL True PC9_epitope_Rep3 1028.4927095317598 1028.4916099358602 69.506 2 0.037631388437254006 0.006058214567568822 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 97056 6055 SEYIHAQVA True NCI_RA007_Epitope_Rep3 1016.4927095317598 1016.49160993586 30.796 2 0.037628329585937016 0.006058214567568822 0.9438714419765777 ['ENSG00000122642|ENST00000242209|FKBP9', 'nc|ENSG00000122642|O95302-3|FKBP9', 'nc|ENSG00000122642|O95302-2|FKBP9', 'ENST00000471066.1_1_7:33042511-33044960:+|nuORF', 'nc|ENSG00000291029|Q75LS8|FKBP9P1', 'ENST00000475220.1_1_7:33038205-33044960:+|nuORF', 'ENST00000455909.5_1_7:55750344-55756724:-|nuORF'] 9429 10807 AVVPSTATV True PC9_epitope_Rep6 843.4701831820299 843.46908993586 52.413 2 0.0376198792678378 0.006058214567568822 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 44037 21692 ILLAEVPTM True PC9_epitope_Rep5 985.55180463101 985.55070993586 88.486 2 0.037585243866162965 0.006058214567568822 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF'] 106567 15889 SVWTKVEGV True PC9_epitope_Rep1 1003.5338460677498 1003.53274993586 65.927 2 0.03754656977603093 0.006058214567568822 0.9438714419765777 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 4061 13356 AHQQSIPAVL True PC9_epitope_Rep1 1062.5821932425 1062.58108993586 56.233 2 0.03753742021241423 0.006058214567568822 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 36303 6030 GVGPVPARA True PC9_epitope_Rep5 822.47118624154 822.47008993586 28.187 2 0.03753695904798844 0.006058214567568822 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 75303 19430 NPTLILAA True PC9_epitope_Rep5 811.4803539429099 811.47924993586 79.788 2 0.037515636550902794 0.006058214567568822 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 34023 8832 GNLANVIR True PC9_epitope_Rep2 855.49264996211 855.49154993586 39.324 2 0.03751130805403719 0.006058214567568822 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'SLC25A5|p.T221Lfs*6|1|0.2|ENSG00000005022|chrX:119470434-119470434|C/-|frameshift_variant', 'ENSG00000151475|ENST00000281154|SLC25A31', 'ENST00000418448.1_1_13:57888978-57889152:+|nuORF', 'ENSG00000151729|ENST00000281456|SLC25A4', 'ENSG00000169100|ENST00000381401|SLC25A6'] 1208 6727 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.40686993586 30.789 2 0.037508967174923726 0.006077617202904266 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 52471 6381 KPKVIIVQA True PC9_epitope_Rep2 994.6539016307798 994.65280993586 29.95 2 0.03746922987164288 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF'] 73513 7511 NFGFGDSR True NCI_RA007_Epitope_Rep3 898.3933298436599 898.39222993586 36.67 2 0.03746705622681135 0.006077617202904266 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 118578 13484 VEADGAWVV True H1975_Epitope_Rep2 944.4603467743199 944.4597949679301 56.998 1 0.03746542419161434 0.006077617202904266 0.9438714419765777 ['ENSG00000211455|ENST00000389032|STK38L', 'nc|ENSG00000211455|Q9Y2H1-2|STK38L'] 43533 12319 IIDNSQGF True PC9_epitope_Rep4 892.4290466460399 892.4279499358599 55.195 2 0.0374563338041698 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 27200 17737 FLSTENATV True PC9_epitope_Rep2 980.48147614172 980.48036993586 73.506 2 0.03745630303979379 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000072071|O94910|ADGRL1', 'ENSG00000072071|ENST00000361434|ADGRL1'] 77298 14388 NYKDLNGNVF True PC9_epitope_Rep2 1182.5669371011797 1182.5658499358601 60.605 2 0.03743789034374799 0.006077617202904266 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 26020 14511 FHDGDSVVF True PC9_epitope_Rep2 1021.4505103666099 1021.44940993586 61.087 2 0.037432640013951524 0.006077617202904266 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant', 'ENST00000483715.5_1_3:49712632-49712743:+|nuORF'] 126036 13303 VPAPSPLSA True PC9_epitope_Rep1 837.45961849833 837.45852993586 56.033 2 0.03741320309428112 0.006077617202904266 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 101501 12146 SPAAPVITA True PC9_epitope_Rep2 825.45961849833 825.45852993586 52.029 2 0.037408635567256515 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 32667 15332 GHMGEGFAL True PC9_epitope_Rep5 917.4065373796499 917.40544993586 63.985 2 0.037405385634261386 0.006077617202904266 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 134067 20896 WQLLLPTAL True NCI_RA007_Epitope_Rep5 1053.62226714933 1053.62116993586 87.373 2 0.0373979736111174 0.006077617202904266 0.9438714419765777 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENSG00000162747|ENST00000650385|FCGR3B'] 34451 13422 GQATTAYFL True NCI_RA007_Epitope_Rep3 970.47599683846 970.47544496793 60.073 1 0.03739263372224841 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 26841 21694 FLEQELETI True PC9_epitope_Rep1 1120.56520576568 1120.5641099358602 88.276 2 0.037389584573498974 0.006077617202904266 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 114982 5313 TTISKVSQV True PC9_epitope_Rep6 961.5444107514498 961.54330993586 28.268 2 0.037388218491753895 0.006077617202904266 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 4597 8300 ALADGVQKV True PC9_epitope_Rep3 899.5076313199099 899.50652993586 36.899 2 0.03737790082054351 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 29578 16758 FVIRNIVEA True PC9_epitope_Rep4 1059.6076797143498 1059.60658993586 72.426 2 0.037356964684068385 0.006077617202904266 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 85680 5210 QLRASLQDL True NCI_RA007_Epitope_Rep4 1042.5771078620598 1042.5760099358602 26.575 2 0.0373451410145635 0.006077617202904266 0.9438714419765777 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 123486 17075 VIGPELVHV True PC9_epitope_Rep2 961.55966689277 961.55856993586 70.931 2 0.03733204153856617 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'ENST00000485409.5_1_3:196921289-197023334:-|nuORF'] 39565 8533 HPIDDLQSA True PC9_epitope_Rep1 994.47197408718 994.47086993586 37.659 2 0.03732405712063132 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'TRIM59|p.S202Vfs*3|1|0.51|ENSG00000213186|chr3:160438580-160438580|T/-|frameshift_variant', 'ENSG00000213186|ENST00000309784|TRIM59'] 13476 18540 DPDLNAVLY True H1975_Epitope_Rep2 1018.49712620586 1018.49602993586 76.938 2 0.03732104859470602 0.006077617202904266 0.9438714419765777 ['ENST00000486621.1_1_1:55181548-55183334:+|nuORF', 'ENSG00000243725|ENST00000371281|TTC4'] 27509 20128 FPFAPPAAA True PC9_epitope_Rep2 887.4541391950698 887.45304993586 82.833 2 0.037315527551035406 0.006077617202904266 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 84640 14809 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.5132749679299 61.784 1 0.03730635495042697 0.006077617202904266 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 31977 10175 GETEDTFIA True H1975_Epitope_Rep1 981.4291062156899 981.42855496793 44.078 1 0.0373057777558124 0.006077617202904266 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000522954.1_1_17:4859850-4860339:+|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 41132 20266 HYPPVQVLF True PC9_epitope_Rep1 1098.58621599378 1098.5851099358601 82.784 2 0.03730443554849967 0.006077617202904266 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 53589 12832 KVVDVDVKL True PC9_epitope_Rep5 1013.6120963884499 1013.61098993586 54.369 2 0.037302813170419474 0.006077617202904266 0.9438714419765777 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 4062 12573 AHQQSIPAVL True PC9_epitope_Rep2 1062.5821932425 1062.58108993586 53.67 2 0.037287743709329656 0.006077617202904266 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 108524 7265 TEFQFRGG True NCI_RA007_Epitope_Rep3 940.4402800360797 940.43918993586 35.687 2 0.03724703565667591 0.006089936553512713 0.9438714419765777 ['ENSG00000124614|ENST00000648437|RPS10', 'ENST00000440748.1_1_7:37415149-37415623:+|nuORF', 'ENST00000408001.1_1_6:34712123-34712447:+|nuORF', 'ENST00000468490.1_1_5:50571220-50571544:+|nuORF'] 132176 8388 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 41.932 3 0.03720379387153512 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 88078 15810 QVVGKLIEV True PC9_epitope_Rep5 983.6015317047498 983.60042993586 65.803 2 0.03718693997724592 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 105112 18289 STLPDVTEV True PC9_epitope_Rep5 959.48114178855 959.48004993586 75.363 2 0.03717076738154102 0.006089936553512713 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 27308 19575 FM[Oxidation]ANIPLLL True H1975_Epitope_Rep2 1046.5834394929 1046.58234993586 81.226 2 0.03715802232424775 0.006089936553512713 0.9438714419765777 ['ENSG00000197746|ENST00000394936|PSAP', 'nc|ENSG00000197746|P07602-2|PSAP', 'nc|ENSG00000197746|P07602-3|PSAP'] 96657 10720 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.46472993586 46.261 2 0.037153993148773407 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 110715 8076 TKDSGSISL True PC9_epitope_Rep1 906.46582607758 906.46472993586 35.889 2 0.037141094310498265 0.006089936553512713 0.9438714419765777 ['ENSG00000065613|ENST00000369755|SLK', 'nc|ENSG00000065613|Q9H2G2-2|SLK'] 75013 22167 NMAELFAVV True PC9_epitope_Rep4 992.5001034113199 992.49900993586 93.49 2 0.0371367765068344 0.006089936553512713 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000530983.5_1_8:145651064-145651211:-|nuORF', 'ENST00000526977.5_1_8:145650235-145651211:-|nuORF', 'ENST00000528142.5_1_8:145649272-145651551:-|nuORF'] 36395 19671 GVIAGLNVL True PC9_epitope_Rep6 854.52255310806 854.52200496793 88.322 1 0.037124635028118545 0.006089936553512713 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 65293 2733 LSEKPPYSKY True H1975_Epitope_Rep2 1210.6233893481399 1210.6217549037901 14.577 3 0.037105337465784406 0.006089936553512713 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 97659 9259 SHDDGNIDL True PC9_epitope_Rep3 984.41485313388 984.41374993586 40.56 2 0.03709386015879871 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON'] 106111 2818 SVNGKVLSK True NCI_RA007_Epitope_Rep5 930.5498304850599 930.54872993586 15.699 2 0.03709249537071303 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 101960 20625 SPLTSIISA True PC9_epitope_Rep5 887.49639792987 887.49530993586 84.385 2 0.037087734291939935 0.006089936553512713 0.9438714419765777 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF'] 27658 9336 FQDDPHAGL True PC9_epitope_Rep2 998.4457593393398 998.44466993586 41.249 2 0.03708207881187935 0.006089936553512713 0.9438714419765777 ['ENSG00000106400|ENST00000305105|ZNHIT1', 'ENST00000485387.1_1_7:100865814-100867236:+|nuORF', 'ENST00000492315.5_1_7:100864992-100867236:+|nuORF'] 106545 12150 SVVTGGVQSV True PC9_epitope_Rep5 931.49746055903 931.49691496793 51.724 1 0.03708174835067147 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 39184 5861 HLGALLAR True NCI_RA007_Epitope_Rep5 849.51847078713 849.51736993586 29.23 2 0.03707298183961938 0.006089936553512713 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 20991 8075 ERANGMEL True PC9_epitope_Rep3 918.4229157197799 918.42180993586 36.035 2 0.037070520120135377 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'nc|ENSG00000164548|Q13595-2|TRA2A', 'ENST00000494255.5_1_7:23547037-23556014:-|nuORF'] 103697 11715 SRDSSILIA True PC9_epitope_Rep5 960.52400966004 960.52290993586 50.06 2 0.03706754595025098 0.006089936553512713 0.9438714419765777 ['ENST00000327320.8_2_11:85989390-85989564:+|nuORF', 'ENST00000528250.1_1_11:85988947-85989564:+|nuORF', 'ENSG00000074266|ENST00000263360|EED', 'nc|ENSG00000074266|O75530-2|EED'] 85811 3935 QLYWSHPRK True NCI_RA007_Epitope_Rep5 1213.6356257976897 1213.63399490379 21.462 3 0.03706679810819253 0.006089936553512713 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 3848 12948 AHADPTELAL True PC9_epitope_Rep4 1036.5189242796 1036.5178299358602 57.693 2 0.03704495470140453 0.006089936553512713 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 54484 6275 LAAARLAAA True PC9_epitope_Rep6 826.5024863698198 826.50138993586 32.643 2 0.03703988957845378 0.006089936553512713 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 102024 9454 SPPIPLAK True PC9_epitope_Rep1 821.50108938749 821.49998993586 41.221 2 0.0370213143449403 0.006089936553512713 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 97647 6051 SHAQTVVL True PC9_epitope_Rep6 853.46576650793 853.46466993586 31.641 2 0.03701619129609 0.006089936553512713 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 47353 8567 IYHNPTANSF True PC9_epitope_Rep6 1162.54072235334 1162.5396299358601 42.728 2 0.037014358185949406 0.006089936553512713 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 1702 5429 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 25.941 2 0.0370082374671326 0.006089936553512713 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 40024 4225 HQVEQTEL True NCI_RA007_Epitope_Rep5 982.4719740871799 982.47086993586 22.79 2 0.03700557855238531 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 2667 7267 AETAAVTVAA True H1975_Epitope_Rep2 902.4709114580199 902.4703649679301 32.888 1 0.036981067661218676 0.006089936553512713 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 96135 11189 SEDYPAALP True H1975_Epitope_Rep1 961.4392769765699 961.43872496793 48.007 1 0.03697026698129539 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-4|ETS1'] 17300 8244 EHDPHVLLA True PC9_epitope_Rep2 1029.5243440132099 1029.5232499358601 37.067 2 0.03695274016802972 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 44674 19339 IPLTLLPAA True PC9_epitope_Rep6 907.5742543277498 907.57314993586 87.036 2 0.03694961565024672 0.006089936553512713 0.9438714419765777 ['ENSG00000116903|ENST00000366645|EXOC8'] 139499 13778 YTIDTENSTV True PC9_epitope_Rep1 1141.51389846881 1141.51280993586 57.844 2 0.03693932929484571 0.006089936553512713 0.9438714419765777 ['LSM14A-GPI|1|fusion', 'nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A', 'LSM14A-GPI|2|fusion'] 35804 21246 GTYDIFYTA True PC9_epitope_Rep3 1049.47057710485 1049.46948993586 87.016 2 0.036915320036526006 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 70731 5711 MEADLKAAA True H1975_Epitope_Rep3 918.4480678384599 918.44696993586 26.996 2 0.03691127399286944 0.006089936553512713 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 41203 14166 IADEGTWTL True NCI_RA007_Epitope_Rep3 1004.48147614172 1004.48036993586 63.011 2 0.03690312558226037 0.006089936553512713 0.9438714419765777 ['ENSG00000170584|ENST00000302764|NUDCD2'] 999 5678 AEAELLQQQK True H1975_Epitope_Rep3 1156.60880191316 1156.6077099358602 26.869 2 0.03690070968544242 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 134409 11612 WTDGSTLQY True H1975_Epitope_Rep2 1069.47163973401 1069.4705499358602 49.733 2 0.0368670774860096 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 137993 20854 YQAPDIDVQL True PC9_epitope_Rep3 1160.57135377528 1160.57077496793 85.488 1 0.036853278003173354 0.006089936553512713 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 140795 10443 YYSHLEGARF True PC9_epitope_Rep2 1241.5829215184897 1241.58127490379 45.489 3 0.036852225499299625 0.006089936553512713 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 45741 19844 ISMPDFDLHL True PC9_epitope_Rep6 1186.5692456003 1186.5681499358602 88.99 2 0.03684141908671129 0.006089936553512713 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 22999 16421 EVISKLYAV True PC9_epitope_Rep1 1020.5855472874398 1020.58444993586 67.987 2 0.03683047894447785 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 70916 12529 M[Oxidation]ELITPISA True H1975_Epitope_Rep1 989.5103341222899 989.50978496793 53.236 1 0.03682675728602867 0.006089936553512713 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 1150 11367 AEAPTALVP True H1975_Epitope_Rep2 867.4701831820299 867.46908993586 48.773 2 0.036737569977909966 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF', 'ENST00000474741.5_1_22:32009833-32014520:+|nuORF'] 6813 16712 AQGGVLPNI True PC9_epitope_Rep6 867.48141657207 867.48030993586 76.757 2 0.03670736646631576 0.006089936553512713 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC8|p.A114T|1|0.22|ENSG00000277075|chr6:26217314-26217314|G/A|missense_variant', 'H2AC4|p.Q113K|1|0.39|ENSG00000278463|chr6:26033232-26033232|G/T|missense_variant', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 138081 7460 YQEGAKMAV True PC9_epitope_Rep1 995.4746169394698 995.47350993586 33.512 2 0.036704118129739526 0.006089936553512713 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 132803 9333 VYSRDPNYL True PC9_epitope_Rep4 1125.5454733806098 1125.54436993586 43.506 2 0.03669919082315231 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 112575 9740 TPAPHSPWTA True PC9_epitope_Rep4 1063.50869394907 1063.50758993586 45.102 2 0.03669459740516935 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 97037 13435 SEWKFTITP True NCI_RA007_Epitope_Rep4 1107.56006081559 1107.5589699358602 58.865 2 0.03667587151681944 0.006089936553512713 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 97563 11837 SGVSLAALK True PC9_epitope_Rep1 844.50181766348 844.50072993586 50.396 2 0.03667359718810017 0.006089936553512713 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 8056 14723 ATDYTFAMY True H1975_Epitope_Rep3 1081.44264810485 1081.44207496793 62.007 1 0.03665189541993796 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'FOXP4-CCND3|5|fusion', 'FOXP4-CCND3|1|fusion', 'FOXP4-CCND3|3|fusion', 'FOXP4-CCND3|2|fusion', 'FOXP4-CCND3|4|fusion', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 71348 11369 MHSIGGVQV True PC9_epitope_Rep2 926.4643866089399 926.46328993586 49.052 2 0.0366483770698618 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant', 'LRBA|p.L476I|1|0.18|ENSG00000198589|chr4:150908401-150908401|G/T|missense_variant'] 2405 10941 AEQLAKWIA True H1975_Epitope_Rep3 1028.5654805491997 1028.5643899358602 47.171 2 0.036646658372222495 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000104723|Q13454-2|TUSC3', 'ENSG00000104723|ENST00000503731|TUSC3'] 97034 15638 SEWDGIVTV True NCI_RA007_Epitope_Rep5 1004.4814761417199 1004.48097496793 66.859 1 0.03663781464257071 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 9055 22544 AVITGFFTV True PC9_epitope_Rep2 953.5222187548899 953.52167496793 92.208 1 0.03663672184846072 0.006089936553512713 0.9438714419765777 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 35458 15409 GTELGNELFY True H1975_Epitope_Rep3 1141.5291546101298 1141.52857496793 64.682 1 0.03663330832073292 0.006089936553512713 0.9438714419765777 ['ENSG00000126821|ENST00000247225|SGPP1'] 103489 7421 SRAPVSAL True PC9_epitope_Rep5 799.45520182423 799.45410993586 33.5 2 0.0366309348574011 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 3933 8229 AHDSSEYAI True PC9_epitope_Rep3 991.42468954159 991.42358993586 36.632 2 0.036625596723751055 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 132637 13305 VYQHGLTGF True PC9_epitope_Rep5 1020.5028802926398 1020.50178993586 56.19 2 0.03662265362220723 0.006089936553512713 0.9438714419765777 ['ENSG00000030110|ENST00000374467|BAK1'] 70786 9571 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42662993586 41.738 2 0.03661577557546898 0.006089936553512713 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 127130 10601 VQDESHSEWV True PC9_epitope_Rep5 1214.52038083158 1214.5192899358601 45.764 2 0.03661412194108483 0.006089936553512713 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF'] 91758 6047 RPKPIITSV True PC9_epitope_Rep6 1009.62841515893 1009.62730993586 31.624 2 0.036589551598598904 0.006089936553512713 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 89215 5927 REINITSA True NCI_RA007_Epitope_Rep4 902.48214484806 902.48104993586 29.419 2 0.03657717813113518 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 135678 5606 YEHEVRLSP True H1975_Epitope_Rep2 1128.55637241748 1128.55471490379 26.565 3 0.0365606751000456 0.006089936553512713 0.9438714419765777 ['ENSG00000205730|ENST00000381440|ITPRIPL2', 'ENST00000566735.1_1_16:19125342-19127388:+|nuORF', 'ENST00000564808.6_1_16:19125342-19138551:+|nuORF'] 140634 20814 YYPAGTQLF True PC9_epitope_Rep3 1058.5072969667401 1058.5061899358602 85.334 2 0.03655989474182128 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000104413|Q6NXG1-2|ESRP1', 'nc|ENSG00000104413|Q6NXG1-5|ESRP1', 'nc|ENSG00000104413|Q6NXG1-4|ESRP1', 'nc|ENSG00000104413|Q6NXG1-3|ESRP1', 'ENSG00000104413|ENST00000433389|ESRP1'] 60407 8287 LIIYSRNQ True NCI_RA007_Epitope_Rep5 1005.5607295219299 1005.55962993586 38.553 2 0.036550952709359236 0.006089936553512713 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.T725S|2|0.23|ENSG00000181544|chrX:14843974-14843974|T/A|missense_variant'] 15737 20953 EDEAESDIFSI True PC9_epitope_Rep5 1253.52994245577 1253.52884993586 85.654 2 0.03654997622106182 0.006089936553512713 0.9438714419765777 ['ENSG00000108561|ENST00000225698|C1QBP'] 7173 22296 ARDEIIWLL True PC9_epitope_Rep3 1127.63389446219 1127.63337496793 91.046 1 0.036548367074674466 0.006089936553512713 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 71825 18446 MPAGSFITA True PC9_epitope_Rep5 893.43168949833 893.43058993586 75.973 2 0.036539347632918426 0.006089936553512713 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 21487 4174 ERQPGAASL True PC9_epitope_Rep6 927.4773938207899 927.47628993586 22.997 2 0.036537641012609 0.006089936553512713 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 137051 17302 YKVEYPIMY True PC9_epitope_Rep6 1204.58383303528 1204.58272993586 79.159 2 0.03653325369621658 0.006089936553512713 0.9438714419765777 ['ENSG00000143198|ENST00000367889|MGST3', 'ENST00000488688.1_1_1:165619084-165620325:+|nuORF', 'ENST00000477450.1_1_1:165619084-165623023:+|nuORF'] 60787 5375 LKGDDLQAIKK True PC9_epitope_Rep3 1227.7186867153098 1227.71704490379 25.749 3 0.03653207925993314 0.006089936553512713 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC'] 107196 23161 SYPAFWTSF True PC9_epitope_Rep5 1104.4916469026 1104.4905499358601 94.077 2 0.036530490972236526 0.006089936553512713 0.9438714419765777 ['ENST00000299505.6_1_19:34791118-34791184:+|nuORF'] 34530 5044 GQEDHYNNL True PC9_epitope_Rep6 1088.45230127176 1088.45120993586 27.032 2 0.03652860069502696 0.006089936553512713 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 137504 19184 YLPPGFLSA True PC9_epitope_Rep6 963.50656869075 963.50546993586 86.443 2 0.036515988976322196 0.006089936553512713 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 834 6871 ADEGISFR True NCI_RA007_Epitope_Rep3 893.42429561877 893.42318993586 34.136 2 0.036495723654998466 0.006089936553512713 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1'] 5961 9260 APITGQVSA True PC9_epitope_Rep5 842.4497820906199 842.44868993586 40.567 2 0.036491281866742546 0.006089936553512713 0.9438714419765777 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 31542 6490 GEFKEQLQA True NCI_RA007_Epitope_Rep3 1048.5189242796 1048.5178299358602 32.559 2 0.03648183752348681 0.006089936553512713 0.9438714419765777 ['ENSG00000184743|ENST00000398868|ATL3'] 30612 6428 GALALEEK True PC9_epitope_Rep2 829.4545331178899 829.45342993586 30.134 2 0.036474741441470816 0.006089936553512713 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 44649 16970 IPLDPVAG True PC9_epitope_Rep5 780.4381547777599 780.43760496793 70.294 1 0.03642797949057585 0.006110828202398037 0.9438714419765777 ['CON__P12763'] 69657 14085 LVVSTQTALA True PC9_epitope_Rep6 1001.5757108797299 1001.5746099358599 66.05 2 0.03642096026783658 0.006110828202398037 0.9438714419765777 ['CON__P02769'] 48054 10444 KALSDHHIYL True PC9_epitope_Rep3 1195.63495709135 1195.63330490379 45.109 3 0.0364139819516715 0.006110828202398037 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 30034 11646 FYIHEVQEL True NCI_RA007_Epitope_Rep3 1176.5815245361598 1176.5804299358601 52.929 2 0.036413373435182195 0.006110828202398037 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF'] 99576 9030 SLFGSPVAK True NCI_RA007_Epitope_Rep1 904.50181766348 904.50072993586 39.128 2 0.036401718198557614 0.006110828202398037 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 1956 6141 AEIPETSNA True H1975_Epitope_Rep3 930.4294405688601 930.42834993586 28.632 2 0.03635440115187768 0.006110828202398037 0.9438714419765777 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 47737 11771 IYQKAFEHL True PC9_epitope_Rep5 1147.6025943339098 1147.60093490379 50.274 3 0.03633792659703154 0.006110828202398037 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 36847 13407 GVPTKVFNV True PC9_epitope_Rep4 959.5440168286299 959.54290993586 59.472 2 0.036326877829227444 0.006110828202398037 0.9438714419765777 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3'] 3573 6235 AGPASVPLR True NCI_RA007_Epitope_Rep2 866.4974009893799 866.49630993586 28.86 2 0.03632514265529776 0.006110828202398037 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 2702 4101 AETKPPM[Oxidation]AP True H1975_Epitope_Rep2 956.4637182830398 956.46262993586 20.866 2 0.0362999046632807 0.006110828202398037 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 77530 6963 NYQNVVHKL True PC9_epitope_Rep4 1113.59309227937 1113.59198993586 34.021 2 0.03629613355808723 0.006110828202398037 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4', 'ZMYM4|p.P896Lfs*7|1|0.34|ENSG00000146463|chr1:35392308-35392308|C/-|frameshift_variant'] 1196 6012 AEDDRHYNIP True H1975_Epitope_Rep2 1228.54726428576 1228.54616993586 28.104 2 0.036292480228291304 0.006110828202398037 0.9438714419765777 ['ENSG00000154124|ENST00000284274|OTULIN'] 105854 9434 SVIVQPFSK True NCI_RA007_Epitope_Rep1 1003.57023157647 1003.56912993586 40.69 2 0.036289686967641815 0.006110828202398037 0.9438714419765777 ['nc|ENSG00000285253|Q6N043-2|ZNF280D', 'ENSG00000137871|ENST00000267807|ZNF280D', 'nc|ENSG00000285253|Q6N043-3|ZNF280D', 'nc|ENSG00000285253|Q6N043-6|ZNF280D'] 63860 8964 LPTTNSGVSA True PC9_epitope_Rep5 945.47672511445 945.47562993586 39.423 2 0.03628697353922065 0.006110828202398037 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 59820 9028 LHDINAQM True PC9_epitope_Rep5 940.4436511643601 940.44254993586 39.672 2 0.036274583982209875 0.006110828202398037 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 1591 16411 AEFLKVFLP True NCI_RA007_Epitope_Rep4 1062.6113681124598 1062.61026993586 71.128 2 0.03625579103843451 0.006110828202398037 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3'] 46939 22052 IVLPEDLQL True PC9_epitope_Rep2 1038.5961119711399 1038.59557496793 90.296 1 0.03624781977247611 0.006133833298613522 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 73567 13365 NFTNVAATF True NCI_RA007_Epitope_Rep3 983.4712458111899 983.47014993586 59.835 2 0.03623909044923461 0.00615128460097588 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 109943 11010 THSDQFLVA True PC9_epitope_Rep4 1016.4927095317599 1016.49160993586 50.127 2 0.036231981257618194 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'chr10:7799683-7799772|176|17.9|0.71|4.65|+|1|None,ATP5F1C|1'] 44213 7407 ILSGVVTK True PC9_epitope_Rep2 815.51165407119 815.51054993586 33.869 2 0.036226178007748834 0.00615128460097588 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 77162 20664 NYFIPSHYF True PC9_epitope_Rep1 1186.54474510462 1186.54364993586 84.306 2 0.03622021800346425 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'nc|ENSG00000146414|Q149N8-2|SHPRH', 'SHPRH|p.R1289Lfs*8|1|0.16|ENSG00000146414|chr6:145921309-145921310|-/A|frameshift_variant', 'nc|ENSG00000146414|Q149N8-5|SHPRH'] 125876 8439 VNSATGVPTV True H1975_Epitope_Rep1 943.49746055903 943.49691496793 37.387 1 0.036209792746436265 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 76159 7102 NRSDPVTL True PC9_epitope_Rep4 900.46649478392 900.46538993586 34.585 2 0.03620958708496039 0.00615128460097588 0.9438714419765777 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5', 'ENSG00000086548|ENST00000199764|CEACAM6', 'RPS19-CEACAM5|3|fusion', 'nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 7160 10770 ARAPATLL True PC9_epitope_Rep5 811.49158733295 811.49048993586 46.418 2 0.0362065461075924 0.00615128460097588 0.9438714419765777 ['NT5E|p.E409Rfs*15|1|0.41|ENSG00000135318|chr6:85490520-85490520|G/-|frameshift_variant', 'nc|ENSG00000135318|P21589-2|NT5E', 'ENSG00000135318|ENST00000257770|NT5E', 'NT5E|p.A15D|1|0.67|ENSG00000135318|chr6:85450183-85450183|C/A|missense_variant'] 101829 19422 SPILVATAV True PC9_epitope_Rep3 869.52221875489 869.52112993586 79.933 2 0.0362057913819775 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 74093 13434 NHVISPLL True PC9_epitope_Rep6 891.5178020807899 891.51670993586 63.363 2 0.03619748819386387 0.00615128460097588 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 9635 19462 AYGGAFYAF True PC9_epitope_Rep6 965.42831837005 965.4272299358599 87.523 2 0.03619521726310189 0.00615128460097588 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 3062 12782 AGAAVAFI True H1975_Epitope_Rep2 718.40137534622 718.40082496793 54.27 1 0.03619047950577292 0.00615128460097588 0.9438714419765777 ['ENSG00000147100|ENST00000587091|SLC16A2'] 15153 12380 EAEPHPLWEY True H1975_Epitope_Rep3 1269.56660274801 1269.56550993586 52.806 2 0.03617744674106595 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'ENST00000568463.1_1_16:68389580-68391124:+|nuORF', 'ENST00000568975.5_1_16:68386292-68391124:+|nuORF', 'nc|ENSG00000132600|Q9NVM4-2|PRMT7'] 3906 15416 AHDDSVMYL True PC9_epitope_Rep3 1049.44879611445 1049.4476899358601 64.452 2 0.03617616703589682 0.00615128460097588 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 113173 16088 TQDGNIYQL True PC9_epitope_Rep4 1050.4981888350198 1050.49767496793 69.818 1 0.03616890385297106 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 26033 20605 FHDHALMIIF True PC9_epitope_Rep2 1242.6219498795 1242.6208499358602 84.691 2 0.03616727630568367 0.00615128460097588 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 123549 10192 VIIGSTHVL True NCI_RA007_Epitope_Rep4 937.55966689277 937.55856993586 46.059 2 0.036165857326428616 0.00615128460097588 0.9438714419765777 ['ENSG00000116266|ENST00000370008|STXBP3'] 103640 19741 SRDLSLLI True PC9_epitope_Rep5 915.5389314481899 915.53782993586 80.979 2 0.03614994175766418 0.00615128460097588 0.9438714419765777 ['ENSG00000242550|ENST00000238508|SERPINB10'] 32104 13441 GEYGNLVTI True NCI_RA007_Epitope_Rep3 964.48656152216 964.48546993586 60.148 2 0.036133230392141405 0.00615128460097588 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525056.1_1_11:108203545-108206748:+|nuORF'] 130017 20830 VTPPGFQLV True PC9_epitope_Rep2 956.53311779176 956.53202993586 85.566 2 0.03613310530991358 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 95210 8566 SAAM[Oxidation]PGASL True PC9_epitope_Rep5 819.37965430591 819.37854993586 37.891 2 0.03612695772132583 0.00615128460097588 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 70034 19076 LYGPSSVSF True PC9_epitope_Rep4 955.46509780159 955.46400993586 81.466 2 0.03611532922484628 0.00615128460097588 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 36780 17936 GVPEWFHGA True PC9_epitope_Rep5 998.4610154806597 998.45990993586 74.009 2 0.036111574267425964 0.00615128460097588 0.9438714419765777 ['ENSG00000196684|ENST00000613986|HSH2D'] 70492 21296 LYSSEQLLI True PC9_epitope_Rep1 1064.57537652656 1064.57426993586 86.743 2 0.03609184225014425 0.00615128460097588 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 75296 19519 NPTLILAA True PC9_epitope_Rep1 811.4803539429099 811.47980496793 79.9 1 0.03607937943534314 0.00615128460097588 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 54485 6424 LAAARLAAA True PC9_epitope_Rep6 826.5024863698198 826.50138993586 33.329 2 0.03605474267007166 0.00615128460097588 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 30647 15111 GALETIWR True PC9_epitope_Rep2 944.5079656730799 944.50686993586 63.381 2 0.03605091133812063 0.00615128460097588 0.9438714419765777 ['ENSG00000162461|ENST00000294454|SLC25A34'] 48693 4337 KEMELPAKEA True H1975_Epitope_Rep3 1144.5798102839997 1144.5781649037901 21.799 3 0.03602229685796595 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 12655 12579 DLEKEAPWEY True H1975_Epitope_Rep3 1278.57683307854 1278.5757299358602 53.587 2 0.03602069287596328 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ABCC4|p.L1261Ffs*59|1|0.26|ENSG00000125257|chr13:95034692-95034693|-/AA|frameshift_variant', 'ENSG00000125257|ENST00000645237|ABCC4'] 2194 6064 AENGSSLPSA True H1975_Epitope_Rep3 931.4246895415899 931.42358993586 28.336 2 0.03601514976089363 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5'] 104159 12393 SSAPGLTSV True PC9_epitope_Rep5 817.4181476091701 817.4175949679301 52.666 1 0.03601135586255327 0.00615128460097588 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1'] 95402 9093 SAIQSISHV True PC9_epitope_Rep4 940.4977949122 940.49668993586 42.563 2 0.03600459532245182 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 52356 8844 KPFKEFVEA True PC9_epitope_Rep4 1093.5807962601698 1093.5796899358602 41.55 2 0.03600116813004463 0.00615128460097588 0.9438714419765777 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 16035 6511 EEAGAELQA True H1975_Epitope_Rep2 916.4137905047199 916.41324496793 29.962 1 0.036001008397464666 0.00615128460097588 0.9438714419765777 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 120329 16336 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 67.834 2 0.03599564541585995 0.00615128460097588 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 90741 9725 RKQMVIDVL True NCI_RA007_Epitope_Rep4 1100.6375999436398 1100.6365099358602 44.252 2 0.03599530315187067 0.00615128460097588 0.9438714419765777 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 31777 12990 GELPAWAA True H1975_Epitope_Rep2 813.40210362221 813.4015549679301 55.083 1 0.035993597979620214 0.00615128460097588 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 34628 17304 GQIEVVPEV True PC9_epitope_Rep6 968.5178616504398 968.51731496793 79.166 1 0.035991883208492406 0.00615128460097588 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 29419 24110 FVFPGELLL True PC9_epitope_Rep3 1033.5848190114498 1033.58427496793 98.021 1 0.03598378920344858 0.00615128460097588 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 77501 10851 NYQGHFHLF True NCI_RA007_Epitope_Rep4 1161.5355774032498 1161.53392490379 48.588 3 0.03597680078363167 0.00615128460097588 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 91752 6782 RPKPIITSV True PC9_epitope_Rep2 1009.62841515893 1009.62730993586 31.491 2 0.03595492681565724 0.00615128460097588 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 52288 11729 KPAEFTIDA True PC9_epitope_Rep2 990.5022115862998 990.50110993586 50.448 2 0.035945570558164296 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant', 'FLNC|p.V684L|1|0.18|ENSG00000128591|chr7:128841496-128841496|G/C|missense_variant'] 140505 11717 YYINGKTGL True PC9_epitope_Rep2 1027.53384606775 1027.53274993586 50.401 2 0.035941153102196144 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 61247 20510 LLDRFLATV True PC9_epitope_Rep2 1046.61243074162 1046.61132993586 84.322 2 0.03593940208108132 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000118816|Q14094-2|CCNI', 'ENSG00000118816|ENST00000237654|CCNI'] 136765 19921 YIPTELDQV True PC9_epitope_Rep5 1076.53899101784 1076.5378899358602 81.681 2 0.03593693804212148 0.006169273781741722 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 9036 16274 AVIGDVIRV True PC9_epitope_Rep6 940.57056592964 940.56946993586 74.96 2 0.0359078464517126 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 131744 11849 VYAALQRQLL True NCI_RA007_Epitope_Rep1 1173.6869926642098 1173.6858899358601 50.072 2 0.035891600966442526 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 11956 17852 DHTAPLLL True PC9_epitope_Rep1 878.48616759934 878.48506993586 73.462 2 0.035888283486404424 0.006169273781741722 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 57130 15615 LEEPPLVLAA True H1975_Epitope_Rep2 1050.5961119711399 1050.5950099358602 65.219 2 0.03588645140077075 0.006169273781741722 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9', 'ENST00000464863.1_1_6:32825734-32826344:+|nuORF', 'ENST00000467593.1_1_6:32823908-32826344:+|nuORF'] 24567 20814 FALPGLLHA True PC9_epitope_Rep5 937.5385375253701 937.53798496793 85.11 1 0.035878473005778094 0.006169273781741722 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 40511 20078 HSFTEFMGV True PC9_epitope_Rep3 1053.45896687533 1053.4578699358601 82.481 2 0.035874001676300546 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000137177|Q9H1H9-3|KIF13A', 'nc|ENSG00000137177|Q9H1H9-4|KIF13A', 'nc|ENSG00000137177|Q9H1H9-2|KIF13A', 'ENSG00000137177|ENST00000259711|KIF13A'] 48537 7162 KEFQDLREV True NCI_RA007_Epitope_Rep4 1162.5982372294598 1162.5965849037902 34.171 3 0.03586725136401132 0.006169273781741722 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 733 16018 AAVPGKTFVNI True PC9_epitope_Rep5 1115.63389446219 1115.63278993586 66.603 2 0.03585943617666594 0.006169273781741722 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 59802 6165 LHAQGDPAL True PC9_epitope_Rep4 920.4715801643599 920.47048993586 30.743 2 0.03585694384937047 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000257365|P49356-2|FNTB', 'ENSG00000257365|ENST00000246166|FNTB'] 34774 22294 GQSELTLLL True PC9_epitope_Rep5 972.54916177872 972.54861496793 90.761 1 0.03582602990249858 0.006169273781741722 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 112963 20283 TPSIPVLTA True PC9_epitope_Rep1 897.51713337445 897.51602993586 82.846 2 0.03582594705054042 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 132117 9144 VYIPSKTDL True NCI_RA007_Epitope_Rep4 1034.5648118428599 1034.56370993586 42.013 2 0.035815906570954514 0.006169273781741722 0.9438714419765777 ['ENSG00000145912|ENST00000274606|NHP2'] 138355 7890 YRDEFSHQV True PC9_epitope_Rep3 1179.53088594563 1179.52924490379 35.333 3 0.03580777897456021 0.006169273781741722 0.9438714419765777 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.H813Ifs*24|1|0.36|ENSG00000109111|chr17:28684908-28684908|C/-|frameshift_variant'] 132781 20339 VYSQFITQL True PC9_epitope_Rep4 1097.5757108797297 1097.57517496793 86.378 1 0.03579966398534724 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 97614 16113 SHAENILQI True PC9_epitope_Rep3 1023.53490869691 1023.53380993586 67.13 2 0.03579238901642932 0.006169273781741722 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 76476 14154 NTDFGDEFY True H1975_Epitope_Rep2 1106.4192698079798 1106.41867496793 59.597 1 0.035787538493414386 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 31922 13112 GEQWTPIEP True H1975_Epitope_Rep2 1055.4923751785898 1055.49187496793 55.556 1 0.03578573339557241 0.006169273781741722 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA'] 37537 21393 GYMEGYYTF True PC9_epitope_Rep1 1129.44264810485 1129.44207496793 87.122 1 0.03578531012983726 0.006169273781741722 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 77494 11441 NYPQSVPRL True PC9_epitope_Rep6 1072.56654317836 1072.5654499358602 55.069 2 0.03577213444228665 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 106481 15679 SVVGSNQLIEA True PC9_epitope_Rep4 1115.58225281215 1115.5811499358601 68.235 2 0.03576506818182624 0.006169273781741722 0.9438714419765777 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 100478 12951 SLPKGVVEV True PC9_epitope_Rep1 926.54368247546 926.5431349679301 54.687 1 0.035746095118964524 0.006169273781741722 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 88189 19203 QYAGKYVLF True PC9_epitope_Rep3 1087.57023157647 1087.56912993586 79.083 2 0.03573024784599956 0.006169273781741722 0.9438714419765777 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 18235 20712 EISAHLSALVL True PC9_epitope_Rep1 1151.65502382959 1151.65392993586 84.496 2 0.03572276321315947 0.006169273781741722 0.9438714419765777 ['ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 94944 20489 RYPDTIALTF True PC9_epitope_Rep5 1195.62372370131 1195.62262993586 83.851 2 0.03569936509030498 0.006169273781741722 0.9438714419765777 ['ENSG00000137802|ENST00000457542|MAPKBP1', 'nc|ENSG00000137802|O60336|MAPKBP1', 'ENST00000505061.5_1_15:42105116-42107966:+|nuORF', 'nc|ENSG00000137802|O60336-2|MAPKBP1'] 40046 5996 HQVPAVSSV True PC9_epitope_Rep6 922.4872302285 922.48612993586 31.384 2 0.0356832469381402 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 32455 11717 GGHGPSFPL True PC9_epitope_Rep6 867.42390169595 867.42280993586 56.216 2 0.03567736091367107 0.006169273781741722 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 113225 18416 TQDTPIPAL True PC9_epitope_Rep4 954.5022115862998 954.5016649679301 78.905 1 0.035676196874827426 0.006169273781741722 0.9438714419765777 ['MINDY4|p.W431*|2|0.17|ENSG00000106125|chr7:30839252-30839252|G/-|frameshift_variant', 'ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 89315 8756 RELVKNWVP True H1975_Epitope_Rep3 1139.64512785223 1139.64349490379 38.684 3 0.03566927500715017 0.006169273781741722 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 46321 22880 ITFDEIVNI True PC9_epitope_Rep5 1062.55972646242 1062.5586299358602 93.006 2 0.035661211819806055 0.006169273781741722 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12', 'nc|ENSG00000197958|P30050-2|RPL12'] 41135 20131 HYPPVQVLF True PC9_epitope_Rep3 1098.58621599378 1098.5851099358601 82.687 2 0.035659630231586206 0.006169273781741722 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 109804 18130 THIYDMSTVM True PC9_epitope_Rep1 1196.52058115572 1196.51948993586 74.528 2 0.03564016570059013 0.006169273781741722 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 38804 6471 HHYSGNNIEL True PC9_epitope_Rep6 1182.5417849825 1182.5406899358602 33.533 2 0.03563866637152105 0.006169273781741722 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 106765 21710 SYFPKILTF True PC9_epitope_Rep3 1114.60628273202 1114.6051899358602 88.8 2 0.035614230951022376 0.00618823312090145 0.9438714419765777 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-2|SLC39A8'] 98341 17518 SIGRQGLIYL True PC9_epitope_Rep5 1118.64479349906 1118.64368993586 72.388 2 0.035608020151849315 0.00618823312090145 0.9438714419765777 ['ENSG00000179148|ENST00000448843|ALOXE3', 'nc|ENSG00000179148|Q9BYJ1-2|ALOXE3'] 106678 10229 SYAMANTGI True NCI_RA007_Epitope_Rep5 926.41676771018 926.41566993586 45.977 2 0.035599238566346565 0.00618823312090145 0.9438714419765777 ['ENSG00000134294|ENST00000256689|SLC38A2', 'ENSG00000139209|ENST00000266579|SLC38A4'] 113979 19212 TRLEMYNIL True PC9_epitope_Rep4 1151.6008800817501 1151.5997899358601 81.998 2 0.03558935662304376 0.00618823312090145 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 2082 11114 AELLANVA True H1975_Epitope_Rep2 799.44396843419 799.44341496793 47.786 1 0.035585233993804734 0.00618823312090145 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51', 'VPS51|p.I453F|1|0.23|ENSG00000149823|chr11:65108828-65108828|A/T|missense_variant'] 75909 5323 NRDRTQIAL True PC9_epitope_Rep6 1085.59415490853 1085.59304993586 28.307 2 0.035579041675220205 0.00618823312090145 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 52658 6867 KQFEKQVEL True PC9_epitope_Rep2 1147.6237237013097 1147.62208490379 31.816 3 0.035560646471620445 0.00618823312090145 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 9582 18652 AYDDKIYYF True PC9_epitope_Rep4 1196.5389910178399 1196.5378899358602 79.821 2 0.03555418068271885 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 6857 14761 AQIEVVPSA True PC9_epitope_Rep1 912.4916469025999 912.49109496793 61.598 1 0.03554752526994685 0.00618823312090145 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 62151 7486 LLPGELAK True H1975_Epitope_Rep3 839.5116540711899 839.51054993586 33.776 2 0.03554193904225147 0.00618823312090145 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 70854 4897 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 23.964 2 0.035538084426309256 0.00618823312090145 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 17477 11442 EHGPENIVM True PC9_epitope_Rep3 1024.46478053176 1024.4636899358602 49.011 2 0.035508447635075366 0.00618823312090145 0.9438714419765777 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 38640 16460 HHLPMPVAI True PC9_epitope_Rep5 1013.54805666325 1013.54694993586 68.311 2 0.03550842684999918 0.00618823312090145 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 120853 14026 VGDPSVHLL True PC9_epitope_Rep4 935.5076313199099 935.50652993586 61.863 2 0.035501331461575775 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 109745 7920 THGPPVQL True PC9_epitope_Rep6 847.45520182423 847.45410993586 39.895 2 0.03549526928760885 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 29581 15803 FVIRNIVEA True PC9_epitope_Rep6 1059.6076797143498 1059.60658993586 73.044 2 0.03549006640690356 0.00618823312090145 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 60964 17008 LLAESVTEV True PC9_epitope_Rep4 959.5175272972699 959.51642993586 73.415 2 0.03548998090025458 0.00618823312090145 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 62891 23303 LMSLIINTF True PC9_epitope_Rep1 1050.57835373202 1050.5772499358602 94.423 2 0.03548893860238986 0.00618823312090145 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 43453 6184 IHSSSTVL True PC9_epitope_Rep1 842.44978209062 842.44868993586 28.602 2 0.03543171735257266 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 27691 16775 FQDGDTIVNV True PC9_epitope_Rep6 1106.52440358286 1106.5233099358602 77.022 2 0.03541528655853888 0.00618823312090145 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 2216 7757 AENVAVPEA True H1975_Epitope_Rep1 898.4396113297399 898.4390649679301 34.795 1 0.03541221553548405 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 69513 20117 LVSPASFENV True PC9_epitope_Rep5 1061.5393253710101 1061.53822993586 82.427 2 0.03539619701491566 0.00618823312090145 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 73620 21697 NGGLADIFTVF True H1975_Epitope_Rep1 1152.5815245361598 1152.5804299358601 90.153 2 0.03539227786143013 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000577191.5_1_17:7125289-7125622:+|nuORF'] 52351 9401 KPFGQVIST True PC9_epitope_Rep6 975.5389314481899 975.53782993586 46.368 2 0.03537949177788627 0.00618823312090145 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 105540 7422 SVDPTQTEY True H1975_Epitope_Rep1 1038.45056993626 1038.4499749679298 33.552 1 0.03537261911504075 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 129168 8445 VTDEGQLY True H1975_Epitope_Rep2 923.4236269124299 923.42307496793 37.435 1 0.03537098188879597 0.00618823312090145 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 119215 4590 VEKPVGVAA True NCI_RA007_Epitope_Rep4 868.5018176634799 868.50072993586 24.063 2 0.03532707837255891 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'ENST00000562659.1_1_16:85698640-85699994:+|nuORF'] 86090 13988 QPQLPYSQA True PC9_epitope_Rep1 1030.5083595959 1030.5072699358602 58.643 2 0.03532595834989964 0.00618823312090145 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 23859 19591 EYMAQHLVF True PC9_epitope_Rep1 1136.5324661687598 1136.53136993586 80.184 2 0.03532020679745505 0.00618823312090145 0.9438714419765777 ['ENST00000473429.5_1_1:110591964-110592183:+|nuORF', 'nc|ENSG00000143093|Q5VSL9-3|STRIP1', 'ENST00000485775.5_1_1:110582506-110596531:+|nuORF', 'nc|ENSG00000143093|Q5VSL9-2|STRIP1', 'ENSG00000143093|ENST00000369795|STRIP1'] 140286 8492 YYDKHFTEF True NCI_RA007_Epitope_Rep3 1248.54513902744 1248.5440499358601 40.477 2 0.0353059284037842 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 3923 6844 AHDPAGPSL True PC9_epitope_Rep1 863.41373093507 863.41262993586 31.131 2 0.03529765296552781 0.006208743018049208 0.9438714419765777 ['ZNF703|p.G568Dfs*14|1|0.18|ENSG00000183779|chr8:37698603-37698603|G/-|frameshift_variant', 'ZNF703|p.G558Afs*24|1|0.13|ENSG00000183779|chr8:37698569-37698569|G/-|frameshift_variant', 'ENSG00000183779|ENST00000331569|ZNF703'] 14051 8656 DSDFRKDDFY True H1975_Epitope_Rep3 1306.5465955794198 1306.54495490379 38.291 3 0.03529289355675297 0.006208743018049208 0.9438714419765777 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 72787 22064 NAFSENFLEV True PC9_epitope_Rep3 1168.5400536470001 1168.53894993586 90.167 2 0.03529260006213087 0.006208743018049208 0.9438714419765777 ['ENSG00000170836|ENST00000305921|PPM1D', 'ENST00000392995.7_1_17:58734367-58740910:+|nuORF'] 33188 12582 GKVQIPIM[Oxidation]L True NCI_RA007_Epitope_Rep4 1013.5943385297699 1013.59324993586 55.417 2 0.03528632867108841 0.006208743018049208 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 7048 17020 AQVALVNEV True PC9_epitope_Rep1 941.51819600361 941.5176449679301 70.291 1 0.0352787238647983 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 119754 5363 VETPNSTPP True H1975_Epitope_Rep3 940.45017601344 940.44906993586 25.694 2 0.035277604398164845 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 72015 18436 MQIQRVVI True PC9_epitope_Rep1 985.5742714110899 985.57316993586 75.704 2 0.03527102549806019 0.006208743018049208 0.9438714419765777 ['ENST00000392987.7_1_19:14817461-14817590:+|nuORF', 'ENST00000601134.5_1_19:14805840-14818739:+|nuORF', 'ENST00000597301.5_1_19:14804303-14827921:+|nuORF', 'nc|ENSG00000160961|Q96JL9-3|ZNF333', 'ENSG00000160961|ENST00000292530|ZNF333'] 46652 19926 ITVGDIAQV True PC9_epitope_Rep3 914.50729696674 914.50618993586 81.887 2 0.03525944728320354 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'nc|ENSG00000070961|P20020-5|ATP2B1', 'nc|ENSG00000070961|P20020-2|ATP2B1'] 7207 13823 ARDFTVSAL True PC9_epitope_Rep4 978.5134449763399 978.51234993586 61.066 2 0.03522190969476105 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000497177.1_1_3:186504924-186505672:+|nuORF'] 23766 15112 EYIRSLNQF True PC9_epitope_Rep4 1168.58767254576 1168.58656993586 66.057 2 0.035199928007731 0.006208743018049208 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 88891 6211 REAPPVVPP True H1975_Epitope_Rep2 960.5392658013599 960.53816993586 28.86 2 0.035197785076392554 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 97545 20602 SGVEVLVSV True PC9_epitope_Rep1 887.4963979298699 887.4958449679301 84.062 1 0.03519271739408692 0.006208743018049208 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 96655 10529 SENPSVYVP True H1975_Epitope_Rep2 990.4658260775799 990.46472993586 45.521 2 0.03518814008112068 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 113352 5534 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.5496749679301 28.766 1 0.03517815203268546 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 26190 8005 FHSGDDSQVL True PC9_epitope_Rep6 1103.48835242731 1103.48724993586 40.261 2 0.03515960961921495 0.006208743018049208 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3'] 63874 19416 LPVDVVVNA True PC9_epitope_Rep2 924.5280324113199 924.52692993586 80.062 2 0.0351526871927464 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 1923 6446 AEINGTMNA True H1975_Epitope_Rep3 919.4069313024701 919.4063849679301 29.768 1 0.03515131624252577 0.006208743018049208 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 105545 7474 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4499749679298 33.696 1 0.03513375152386334 0.006254327255942765 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 104329 13054 SSEQTFMYY True H1975_Epitope_Rep1 1154.4590264449798 1154.45847496793 55.298 1 0.035131507473310085 0.006254327255942765 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1'] 91768 8666 RPKPSSSPVIF True PC9_epitope_Rep4 1213.68190728377 1213.68080993586 40.824 2 0.035122777701380364 0.006254327255942765 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 113110 4611 TQAPAVATT True NCI_RA007_Epitope_Rep5 858.44469671018 858.44414496793 24.41 1 0.03510355815776866 0.006254327255942765 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF', 'ENST00000475555.1_1_4:144270430-144270667:-|nuORF'] 129062 16932 VTAPELNSI True PC9_epitope_Rep4 942.5022115863001 942.50110993586 73.115 2 0.035088679125246616 0.006277116218960583 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF'] 133260 6847 WEEPSSGNGTA True H1975_Epitope_Rep3 1133.46253160229 1133.46142993586 31.294 2 0.03507964369978124 0.006277116218960583 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 28716 12223 FSVSPVVR True PC9_epitope_Rep1 889.5021520166499 889.50104993586 51.875 2 0.03507152969012085 0.006296706338223083 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 89311 8844 RELVKNWVP True H1975_Epitope_Rep2 1139.64512785223 1139.64349490379 38.986 3 0.035057506555544814 0.006296706338223083 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 2676 11551 AETAVSVIP True H1975_Epitope_Rep1 885.48074786573 885.4801949679301 49.417 1 0.03502544725079017 0.006296706338223083 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 112972 20261 TPSIPVLTA True PC9_epitope_Rep5 897.51713337445 897.51602993586 82.983 2 0.03501491442569288 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 14095 14219 DSDSDQLFY True H1975_Epitope_Rep2 1088.42983449168 1088.42927496793 59.843 1 0.03500719025961461 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1', 'ENST00000358133.5_1_1:11994791-12014648:+|nuORF'] 100490 10849 SLPKGVVEV True PC9_epitope_Rep6 926.54368247546 926.54258993586 52.59 2 0.03500686372578877 0.006296706338223083 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 17538 5987 EHINSVSAM True PC9_epitope_Rep6 986.44913046762 986.44802993586 31.348 2 0.03499407184983532 0.006296706338223083 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 101769 6257 SPHPPSEVTA True PC9_epitope_Rep5 1020.48762415132 1020.48652993586 29.045 2 0.03498924421309856 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 97047 11074 SEYEMSIAA True H1975_Epitope_Rep3 999.4219126602699 999.4213749679301 47.688 1 0.034981374411976456 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000138138|Q8NBU5-2|ATAD1', 'ENSG00000138138|ENST00000680024|ATAD1'] 89119 9003 REFESAIVEA True NCI_RA007_Epitope_Rep5 1149.56660274801 1149.56550993586 41.287 2 0.034976228205469403 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 103297 16998 SQTSATFQL True PC9_epitope_Rep2 981.4767251144499 981.47562993586 70.632 2 0.03496076207527505 0.006296706338223083 0.9438714419765777 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1', 'ENST00000563221.5_1_16:66836914-66839833:-|nuORF'] 139563 14789 YTMSYGDSLYY True H1975_Epitope_Rep2 1361.54856972537 1361.5474699358601 62.044 2 0.03492972043338611 0.006296706338223083 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 104167 8390 SSATTSPFFK True NCI_RA007_Epitope_Rep5 1071.52367530687 1071.52256993586 38.948 2 0.03492063357669714 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB'] 25870 6809 FGHGAEDSL True NCI_RA007_Epitope_Rep1 931.40356017419 931.40246993586 30.493 2 0.0348982548208821 0.006296706338223083 0.9438714419765777 ['ENSG00000173432|ENST00000356524|SAA1'] 40370 4217 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 22.596 3 0.0348708718111054 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 2227 7897 AENVAVPEA True H1975_Epitope_Rep3 898.4396113297399 898.4390649679301 35.351 1 0.034869668090176595 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 105026 5788 STIKEVAQA True PC9_epitope_Rep5 945.5131106231698 945.51200993586 27.256 2 0.03484313805756122 0.006296706338223083 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 22204 6365 ETDEQRLRDEY True H1975_Epitope_Rep2 1452.6481005258397 1452.64700993586 29.41 2 0.0348322891759589 0.006296706338223083 0.9438714419765777 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2'] 17387 17752 EHFDRILEM True PC9_epitope_Rep1 1188.5597435457598 1188.55810490379 73.08 3 0.03482599920076076 0.006296706338223083 0.9438714419765777 ['ENST00000576646.7_1_17:1412470-1416845:-|nuORF', 'nc|ENSG00000132376|Q9BT40-2|INPP5K', 'ENST00000350761.9_1_17:1399119-1419845:-|nuORF', 'ENSG00000132376|ENST00000421807|INPP5K'] 103492 16388 SRATSFLL True PC9_epitope_Rep5 893.49706663621 893.49596993586 68.034 2 0.03482106920820304 0.006296706338223083 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ENST00000481168.1_1_3:128363760-128369658:-|nuORF', 'ENST00000497415.1_1_3:128359957-128369658:-|nuORF'] 8057 14761 ATDYTFAMY True H1975_Epitope_Rep3 1081.44264810485 1081.4415499358602 62.156 2 0.034817914128663675 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'FOXP4-CCND3|5|fusion', 'FOXP4-CCND3|1|fusion', 'FOXP4-CCND3|3|fusion', 'FOXP4-CCND3|2|fusion', 'FOXP4-CCND3|4|fusion', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 84993 12296 QIEEAGWSY True H1975_Epitope_Rep1 1081.4716397340098 1081.47107496793 52.322 1 0.034792757901248916 0.006296706338223083 0.9438714419765777 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 85309 10331 QLAEIQEAC True H1975_Epitope_Rep2 1003.4644461785899 1003.46334993586 44.748 2 0.03478582335709496 0.006296706338223083 0.9438714419765777 ['ENSG00000076321|ENST00000209884|KLHL20', 'ENST00000493170.1_1_1:173684720-173703518:+|nuORF'] 34722 8119 GQNPTEAEL True NCI_RA007_Epitope_Rep1 957.44033960573 957.4397949679301 35.579 1 0.034772347557845265 0.006296706338223083 0.9438714419765777 ['ENSG00000198668|ENST00000356978|CALM1', 'ENSG00000160014|ENST00000291295|CALM3', 'ENSG00000143933|ENST00000272298|CALM2', 'ENST00000400429.3_1_13:41744904-41745177:-|nuORF', 'ENST00000597868.5_1_19:47104691-47111872:+|nuORF', 'ENST00000555267.1_1_14:90866417-90870426:+|nuORF', 'ENST00000482532.5_1_2:47387917-47389823:-|nuORF', 'ENST00000556757.5_1_14:90863574-90867886:+|nuORF', 'ENST00000482532.5_1_2:47389674-47389740:-|nuORF', 'ENSG00000178363|ENST00000315238|CALML3'] 25443 15293 FELPQTPLA True H1975_Epitope_Rep3 1014.5385970950199 1014.53750993586 64.233 2 0.034759328859011354 0.00631875100892466 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 113228 19327 TQDTPIPAL True PC9_epitope_Rep5 954.5022115862998 954.5016649679301 79.385 1 0.03475568099012169 0.00631875100892466 0.9438714419765777 ['MINDY4|p.W431*|2|0.17|ENSG00000106125|chr7:30839252-30839252|G/-|frameshift_variant', 'ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 54472 7106 LAAARLAAA True PC9_epitope_Rep2 826.5024863698198 826.50138993586 32.73 2 0.03474226862507294 0.00631875100892466 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 77154 14677 NYENKQYLF True PC9_epitope_Rep2 1217.57168812845 1217.5705899358602 61.72 2 0.0347416987704505 0.00631875100892466 0.9438714419765777 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 125148 15556 VLPSSLPTF True NCI_RA007_Epitope_Rep4 959.5327834385901 959.53168993586 67.569 2 0.03471057424209566 0.00631875100892466 0.9438714419765777 ['ENSG00000117983|ENST00000529681|MUC5B'] 1067 11276 AEALPSLAA True H1975_Epitope_Rep1 841.4545331178899 841.4539849679301 48.35 1 0.0347054039424749 0.00631875100892466 0.9438714419765777 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA'] 132220 8900 VYKPAQNSW True PC9_epitope_Rep2 1091.5399940773498 1091.5388899358602 39.59 2 0.03470397605394695 0.00631875100892466 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 20826 14079 EQPETYYKW True PC9_epitope_Rep4 1242.5557037111398 1242.55460993586 62.065 2 0.034692469182481894 0.0063407885635231725 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1'] 127001 13576 VPWMPPGKSSA True PC9_epitope_Rep5 1155.57466533391 1155.5735699358602 57.243 2 0.034668430932863065 0.0063407885635231725 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 1924 6460 AEINGTMNA True H1975_Epitope_Rep3 919.4069313024701 919.40582993586 29.82 2 0.034668348202770614 0.0063407885635231725 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 39706 7437 HPTWALKEA True PC9_epitope_Rep6 1051.5450794577898 1051.54398993586 37.835 2 0.03466125473611365 0.0063407885635231725 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 1177 8006 AEDAGATEVKF True H1975_Epitope_Rep3 1136.5349682665599 1136.5338699358601 35.766 2 0.03465768546040356 0.0063407885635231725 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant'] 28030 6651 FRAPNTDAA True PC9_epitope_Rep1 961.4617437566499 961.46064993586 30.387 2 0.034654780163657924 0.0063407885635231725 0.9438714419765777 ['nc|ENSG00000147394|O15231-4|ZNF185', 'nc|ENSG00000147394|O15231-7|ZNF185', 'nc|ENSG00000147394|O15231|ZNF185', 'nc|ENSG00000147394|O15231-3|ZNF185', 'nc|ENSG00000147394|O15231-8|ZNF185', 'nc|ENSG00000147394|O15231-6|ZNF185', 'ENSG00000147394|ENST00000695776|ZNF185', 'nc|ENSG00000147394|O15231-5|ZNF185'] 84717 13293 QHFEFEYQT True PC9_epitope_Rep6 1227.5196525555898 1227.5185499358602 62.786 2 0.034654557138037126 0.0063407885635231725 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 84610 2624 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 14.743 2 0.03464939095838578 0.0063612058633723614 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 140158 17400 YVTDVLYRV True PC9_epitope_Rep6 1126.60225998074 1126.60116993586 79.544 2 0.034632278675504724 0.0063612058633723614 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1'] 70287 16537 LYPDHFHLL True PC9_epitope_Rep6 1153.59202965021 1153.5903749037902 76.049 3 0.03462662107404417 0.0063612058633723614 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 9640 11940 AYGHFSYEF True NCI_RA007_Epitope_Rep4 1119.46616043075 1119.4650699358601 52.928 2 0.034626123346426146 0.0063612058633723614 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 135743 5869 YELGRPAA True NCI_RA007_Epitope_Rep3 875.4501164437899 875.44900993586 30.064 2 0.03462351858329198 0.0063612058633723614 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8', 'ENST00000470475.1_1_1:45241268-45242451:+|nuORF'] 71419 24474 MIPLLLAAL True PC9_epitope_Rep1 953.5983609006099 953.59726993586 98.984 2 0.03461972091477743 0.0063612058633723614 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2'] 17083 10823 EGRDTHYLI True PC9_epitope_Rep1 1102.54072235334 1102.5396299358601 46.517 2 0.03461535866135292 0.0063612058633723614 0.9438714419765777 ['TENM1|p.F2575L|1|0.89|ENSG00000009694|chrX:124380991-124380991|A/G|missense_variant'] 52340 10502 KPFGQVIST True PC9_epitope_Rep2 975.5389314481899 975.53782993586 45.717 2 0.03460974777502544 0.0063612058633723614 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 5802 15937 APFGGFKMS True PC9_epitope_Rep5 940.4476739156399 940.44656993586 66.292 2 0.03460354458606491 0.0063612058633723614 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 86208 8988 QPVSGTQVV True PC9_epitope_Rep2 913.48689587533 913.48578993586 39.926 2 0.0345955999712137 0.0063612058633723614 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 1069 11082 AEALPSLAA True NCI_RA007_Epitope_Rep3 841.4545331178899 841.4539849679301 50.691 1 0.03458275393622512 0.0063612058633723614 0.9438714419765777 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA'] 97678 5651 SHDHGYTTL True PC9_epitope_Rep3 1029.45157299577 1029.4504699358602 26.813 2 0.03454745996514229 0.0063612058633723614 0.9438714419765777 ['nc|ENSG00000099956|Q12824-2|SMARCB1'] 2502 12951 AEQPYFIEA True H1975_Epitope_Rep3 1066.49712620586 1066.4960299358602 55.048 2 0.034537309177869464 0.0063612058633723614 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B'] 29310 16604 FVDPNGKISL True PC9_epitope_Rep5 1088.5866099165999 1088.58550993586 68.873 2 0.03453671092662084 0.0063612058633723614 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 2496 12788 AEQPYFIEA True H1975_Epitope_Rep1 1066.49712620586 1066.4960299358602 54.252 2 0.034535761939121765 0.0063612058633723614 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B'] 26116 12876 FHGAPLTV True PC9_epitope_Rep1 840.4493881678001 840.44828993586 54.401 2 0.03451786937722149 0.0063612058633723614 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 86580 8624 QRDEKVLEL True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 40.654 2 0.03451396226878764 0.0063612058633723614 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 132009 18448 VYGPLPQSF True PC9_epitope_Rep6 1006.5123823471798 1006.51187496793 83.603 1 0.03451345983810418 0.0063612058633723614 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 94518 13905 RYIDRIHIF True PC9_epitope_Rep6 1231.68257599011 1231.68094490379 65.325 3 0.0344962472218246 0.0063733836454834105 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 57849 7415 LEQDHFQVA True H1975_Epitope_Rep2 1085.5141732523298 1085.5130699358601 33.464 2 0.03449148683318669 0.0063733836454834105 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 137582 15263 YLSQDTVSV True PC9_epitope_Rep5 1010.49204082542 1010.49094993586 63.719 2 0.03447698243732227 0.0063733836454834105 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 100661 17969 SLQTSDVVI True PC9_epitope_Rep1 960.5127762699999 960.51166993586 73.911 2 0.03446096603065683 0.0063733836454834105 0.9438714419765777 ['SLC25A13-MAGI2|2|fusion', 'SLC25A13-MAGI2|1|fusion', 'nc|ENSG00000187391|Q86UL8-2|MAGI2', 'ENSG00000187391|ENST00000354212|MAGI2'] 138479 18606 YRGIFPVL True PC9_epitope_Rep6 963.5541875895099 963.55308993586 84.211 2 0.034451099248432565 0.0063733836454834105 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000565143.1_1_15:72491993-72493046:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 569 11161 AARLPLDAA True PC9_epitope_Rep1 896.5079656730799 896.50686993586 47.816 2 0.03444727820166737 0.0063733836454834105 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 54627 17600 LADLSCLVY True H1975_Epitope_Rep2 995.4997690581499 995.4992249679301 73.013 1 0.034443105066299946 0.0063733836454834105 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'DCAF5-ERH|1|fusion', 'ENST00000523006.1_1_7:139219111-139219246:+|nuORF'] 67139 16346 LTDEAFEFY True H1975_Epitope_Rep1 1133.49170647225 1133.49117496793 68.234 1 0.03444200060546828 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENST00000495663.1_1_16:538965-546860:+|nuORF'] 95204 13814 SAAMPGASL True PC9_epitope_Rep3 803.38473930591 803.38364993586 58.214 2 0.03443412230786539 0.0063733836454834105 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 56863 6000 LEDKPPAPP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 28.058 2 0.03442148783077745 0.0063733836454834105 0.9438714419765777 ['ENSG00000180370|ENST00000327134|PAK2', 'ENST00000556425.2_1_15:21937379-21938108:-|nuORF'] 70037 20299 LYGQVQVF True PC9_epitope_Rep5 952.5018176634799 952.50072993586 83.131 2 0.03435607862853371 0.0063733836454834105 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'ENSG00000162408|ENST00000377705|NOL9'] 490 5890 AAPAEEPAAAA True PC9_epitope_Rep2 967.4610750503098 967.45996993586 28.048 2 0.034340031261156145 0.0063733836454834105 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 99018 11228 SKPPVISL True PC9_epitope_Rep6 839.51165407119 839.51054993586 54.186 2 0.03431472270207566 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 101765 6300 SPHPPSEVTA True PC9_epitope_Rep3 1020.48762415132 1020.48652993586 29.264 2 0.034312232118582774 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 44504 11854 IPAAIATA True PC9_epitope_Rep2 726.4275900940601 726.4270449679301 50.924 1 0.03429661613137629 0.0063733836454834105 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 35207 8349 GSGERQETLL True PC9_epitope_Rep4 1088.5462016565998 1088.5451099358602 39.572 2 0.03426953670080033 0.0063733836454834105 0.9438714419765777 ['ENST00000593411.1_1_19:17213013-17214246:+|nuORF'] 89201 11546 REIFFPETA True NCI_RA007_Epitope_Rep5 1108.5553097883198 1108.5542099358602 51.061 2 0.034261112785782005 0.0063733836454834105 0.9438714419765777 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 75492 17134 NQINGSFAL True PC9_epitope_Rep6 962.48214484806 962.48104993586 78.491 2 0.034209646077004705 0.0063733836454834105 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 99580 8777 SLFGSPVAK True NCI_RA007_Epitope_Rep4 904.50181766348 904.50072993586 40.565 2 0.03420730716918559 0.0063733836454834105 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 120306 16407 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 67.932 2 0.03420458849406761 0.0063733836454834105 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 88001 17902 QVSEVFNTV True PC9_epitope_Rep5 1021.5080252427299 1021.50692993586 73.877 2 0.03420276766773363 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 5043 13911 ALLGDLTKA True PC9_epitope_Rep6 900.52803241132 900.52692993586 65.349 2 0.034202687662068736 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 138169 9380 YQNQEIHNL True PC9_epitope_Rep3 1157.5465360097699 1157.54542993586 41.019 2 0.03419036240194585 0.0063733836454834105 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000456732.2_10:48190054-48195746:+|nuORF'] 35218 5107 GSGTAEVELK True NCI_RA007_Epitope_Rep1 989.50293986229 989.50184993586 23.95 2 0.03417437039722047 0.0063733836454834105 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 104464 10970 SSLPTQLFK True NCI_RA007_Epitope_Rep5 1019.5651461960299 1019.56404993586 48.834 2 0.03416099005195504 0.0063733836454834105 0.9438714419765777 ['ENSG00000017427|ENST00000337514|IGF1', 'nc|ENSG00000017427|P05019-4|IGF1', 'nc|ENSG00000017427|P05019|IGF1'] 104668 10228 STAAVFHAV True PC9_epitope_Rep2 901.4657665079299 901.46466993586 44.678 2 0.03410720670754125 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000090097|P57723-2|PCBP4', 'ENSG00000090097|ENST00000461554|PCBP4', 'ENST00000497390.5_1_3:51992079-51994784:-|nuORF', 'ENST00000492809.5_1_3:51992079-51994784:-|nuORF'] 77801 19566 PAEPAFLA True PC9_epitope_Rep1 814.4225047136199 814.42140993586 80.086 2 0.03410664378187586 0.0063733836454834105 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 17530 7797 EHINSVSAM True PC9_epitope_Rep1 986.44913046762 986.44802993586 34.815 2 0.034088236797925435 0.0063733836454834105 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 32985 11253 GIVEFASK True PC9_epitope_Rep3 849.45961849833 849.45852993586 48.291 2 0.03407420387084405 0.0063733836454834105 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 84029 20392 QENVLYIL True PC9_epitope_Rep4 990.5385970950199 990.53750993586 86.584 2 0.034067954708336026 0.0063733836454834105 0.9438714419765777 ['ENSG00000122733|ENST00000242315|PHF24'] 83720 7272 QEAPPVPGA True H1975_Epitope_Rep2 864.4341320264798 864.43302993586 32.907 2 0.0340614630840304 0.0063733836454834105 0.9438714419765777 ['ENST00000496125.2_2_19:45596475-45612027:+|nuORF', 'ENSG00000104866|ENST00000221462|PPP1R37'] 83196 15576 PYYSKFILI True NCI_RA007_Epitope_Rep4 1142.6375828603 1142.63648993586 67.664 2 0.03406084892302693 0.0063733836454834105 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5'] 74808 22423 NLPDEEIFQQL True PC9_epitope_Rep1 1344.6561460284 1344.65504993586 91.07 2 0.03405579567246687 0.0063733836454834105 0.9438714419765777 ['ENSG00000169019|ENST00000381571|COMMD8'] 118839 3508 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 18.343 2 0.034052573682401735 0.0063733836454834105 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 1706 5828 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 27.438 2 0.034032177391371696 0.0063733836454834105 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 75756 14547 NRAINIAL True PC9_epitope_Rep5 883.5239500903899 883.52284993586 60.955 2 0.03402663429570429 0.0063733836454834105 0.9438714419765777 ['ENSG00000172336|ENST00000303151|POP7'] 88187 12379 QYAGKYVLF True NCI_RA007_Epitope_Rep4 1087.57023157647 1087.56912993586 54.612 2 0.034023998921385475 0.0063733836454834105 0.9438714419765777 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 36299 6038 GVGPVPARA True PC9_epitope_Rep3 822.47118624154 822.47008993586 28.277 2 0.03400521906461324 0.0063733836454834105 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 3849 8683 AHAGSLTNL True PC9_epitope_Rep1 882.4559301002201 882.45482993586 38.238 2 0.03400387210633342 0.0063733836454834105 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000484998.5_1_20:2635830-2636687:+|nuORF', 'ENST00000480992.5_1_20:2635438-2636687:+|nuORF'] 13847 12153 DRAGSIVL True PC9_epitope_Rep5 829.46576650793 829.46521496793 51.736 1 0.03400160871602825 0.0063733836454834105 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 106156 17472 SVPDPELIKTV True PC9_epitope_Rep5 1196.66525416012 1196.66414993586 72.208 2 0.0339717941632393 0.0063733836454834105 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 108607 9607 TEILSRNLP True H1975_Epitope_Rep2 1041.58185888933 1041.5807699358602 41.929 2 0.03395163644659923 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000182931|Q8IUB3-2|WFDC10B'] 59714 8304 LGVAEAVAA True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 36.893 1 0.03394437110847631 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 125105 16610 VLPGVDALSNI True H1975_Epitope_Rep3 1096.61282466444 1096.61172993586 69.389 2 0.033906616457186546 0.0063733836454834105 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 120307 16500 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 68.291 2 0.033900645757713815 0.0063733836454834105 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 8968 12430 AVHDSFVAV True PC9_epitope_Rep1 943.4763311916299 943.4752299358599 52.675 2 0.03386225953014455 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 139548 13677 YTLREVDTV True PC9_epitope_Rep5 1094.5607890915799 1094.5596899358602 57.633 2 0.0338535006956795 0.0063733836454834105 0.9438714419765777 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 75306 17434 NPTLILAA True PC9_epitope_Rep6 811.4803539429099 811.47924993586 79.674 2 0.033851816988485266 0.0063733836454834105 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 86170 5116 QPSQPVTSA True PC9_epitope_Rep5 913.4505103666099 913.4499649679301 24.704 1 0.0338427098190012 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 42771 22724 IFGVIIDTF True PC9_epitope_Rep4 1023.56408356687 1023.56298993586 95.628 2 0.03381570048337252 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENST00000493491.5_1_3:4841632-4887906:+|nuORF', 'ENSG00000123104|ENST00000381340|ITPR2', 'ENSG00000096433|ENST00000605930|ITPR3'] 101725 21270 SPGTALILLEA True PC9_epitope_Rep4 1083.61757569171 1083.61707496793 89.984 1 0.033810999296586784 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 41443 19798 IAVNAVLTV True PC9_epitope_Rep4 898.5487678559 898.5482149679301 84.279 1 0.033806081414514605 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5', 'ENST00000423695.6_1_5:10250480-10261980:+|nuORF'] 1939 9014 AEIPEEHIP True H1975_Epitope_Rep3 1033.50802524273 1033.5069299358602 39.669 2 0.03379597928500949 0.0063733836454834105 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 70846 5011 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 24.357 2 0.0337848745078668 0.0063733836454834105 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 17232 13359 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50708496793 63.047 1 0.033778652179930216 0.0063733836454834105 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 49452 7174 KIRRSSEEHLR True H1975_Epitope_Rep1 1409.7851435656899 1409.78350490379 32.616 3 0.03377476756885558 0.0063733836454834105 0.9438714419765777 ['ENSG00000078401|ENST00000379375|EDN1'] 17203 14941 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50708496793 62.731 1 0.03377317148455607 0.0063733836454834105 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 47756 8191 IYQRDPLKL True NCI_RA007_Epitope_Rep4 1144.6604435631998 1144.65880490379 38.294 3 0.033761455542827994 0.0063733836454834105 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 102807 17073 SQFPEEILL True NCI_RA007_Epitope_Rep3 1074.55972646242 1074.5586299358602 75.023 2 0.033757644935338296 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 2108 4778 AELPSRTP True H1975_Epitope_Rep2 869.46068112749 869.45958993586 23.468 2 0.03374321084827647 0.0063733836454834105 0.9438714419765777 ['ENSG00000198113|ENST00000357503|TOR4A'] 43902 14517 ILDPHVVLL True H1975_Epitope_Rep3 1017.6222671493299 1017.6211699358599 61.202 2 0.033737424962588115 0.0063733836454834105 0.9438714419765777 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 77614 14497 NYVEKGFQI True PC9_epitope_Rep4 1096.5553097883198 1096.5542099358602 63.674 2 0.03372780091352414 0.0063733836454834105 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 45970 4415 ISSSSFSR True NCI_RA007_Epitope_Rep5 869.42429561877 869.42318993586 23.614 2 0.03369906776808791 0.0063733836454834105 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 20979 18032 ERADPLFL True PC9_epitope_Rep2 959.5076313199099 959.50652993586 74.665 2 0.033695813046601096 0.0063733836454834105 0.9438714419765777 ['BTAF1-MARCH5|1|fusion', 'ENSG00000198060|ENST00000358935|MARCHF5'] 21017 6663 ERAQGVVL True PC9_epitope_Rep6 870.4923156089399 870.49120993586 34.369 2 0.033693337548772656 0.0063733836454834105 0.9438714419765777 ['ENSG00000136950|ENST00000353214|ARPC5L'] 53930 4552 KYISKPENL True NCI_RA007_Epitope_Rep3 1090.60225998074 1090.60116993586 24.779 2 0.03368568362688483 0.0063733836454834105 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 101306 20450 SLYGGTITI True PC9_epitope_Rep2 923.49639792987 923.4958449679301 84.09 1 0.03366809418283409 0.0063733836454834105 0.9438714419765777 ['ENSG00000155827|ENST00000389120|RNF20'] 56936 9685 LEDSPVISA True H1975_Epitope_Rep1 929.47057710485 929.47002496793 42.178 1 0.03363608210216971 0.0063733836454834105 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 9966 18453 AYSAKIALF True PC9_epitope_Rep2 982.5487678558999 982.54766993586 76.311 2 0.03360655895869873 0.0063733836454834105 0.9438714419765777 ['ENSG00000188641|ENST00000370192|DPYD', 'ENST00000474241.1_1_1:98157206-98165091:-|nuORF', 'DPYD|p.G194C|1|0.39|ENSG00000188641|chr1:97699451-97699451|C/A|missense_variant'] 87968 10837 QVRDVIIAA True PC9_epitope_Rep4 983.5763795860698 983.57528993586 49.444 2 0.03360118257062736 0.0063733836454834105 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 48237 7957 KDDYKHRMFWR True H1975_Epitope_Rep1 1580.7670509733998 1580.7654149037899 35.554 3 0.033576739830568594 0.0063733836454834105 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 118103 8179 VATVSLPR True PC9_epitope_Rep6 841.5021520166499 841.50104993586 41.019 2 0.03357672192023183 0.0063733836454834105 0.9438714419765777 ['CON__P00761'] 37247 20614 GVVFSVTTV True PC9_epitope_Rep5 907.5014833103099 907.50038993586 84.34 2 0.033554539086740894 0.0063733836454834105 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4', 'ENST00000489758.1_1_1:25072044-25124343:+|nuORF'] 39327 7322 HLSERADWQY True H1975_Epitope_Rep2 1303.5945488313498 1303.59344993586 33.104 2 0.03354907484584548 0.0063733836454834105 0.9438714419765777 ['ENSG00000107362|ENST00000333421|ABHD17B', 'nc|ENSG00000107362|Q5VST6-2|ABHD17B', 'nc|ENSG00000136379|Q6PCB6-2|ABHD17C', 'ENSG00000136379|ENST00000258884|ABHD17C'] 127984 16017 VRPVALVL True PC9_epitope_Rep6 865.5749230340899 865.57382993586 73.932 2 0.03353887542159234 0.0063949208686050795 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D'] 103638 18515 SRDLSLLI True PC9_epitope_Rep4 915.5389314481899 915.53782993586 79.291 2 0.0335277622568109 0.0063949208686050795 0.9438714419765777 ['ENSG00000242550|ENST00000238508|SERPINB10'] 31525 4491 GEFEKKYVA True NCI_RA007_Epitope_Rep5 1069.5444107514497 1069.5433099358602 23.928 2 0.03350905335604209 0.0063949208686050795 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 15071 8604 EAAVAAVAV True H1975_Epitope_Rep2 799.44396843419 799.44341496793 38.049 1 0.03350582794367331 0.0063949208686050795 0.9438714419765777 ['ENSG00000066735|ENST00000423312|KIF26A', 'KIF26A|p.P954Hfs*31|1|0.2|ENSG00000066735|chr14:104175645-104175645|C/-|frameshift_variant'] 95183 16001 SAAFPGASL True PC9_epitope_Rep6 819.41266830591 819.41156993586 73.861 2 0.033504555187541786 0.0063949208686050795 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 19949 11290 EMDNYEPGVY True H1975_Epitope_Rep3 1215.47540478511 1215.4743099358602 48.532 2 0.0334834154615165 0.0063949208686050795 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'CTNNA1|p.L776Pfs*102|1|0.11|ENSG00000044115|chr5:138932603-138932604|-/C|frameshift_variant'] 30103 17494 FYPPHPDYTW True PC9_epitope_Rep6 1321.5767735088898 1321.57566993586 79.919 2 0.03346246434061453 0.0063949208686050795 0.9438714419765777 ['ENSG00000130309|ENST00000252599|COLGALT1'] 110149 21831 TIDDGIFEV True PC9_epitope_Rep5 1007.48114178855 1007.48004993586 89.005 2 0.033456929188214066 0.0063949208686050795 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 85112 17957 QISDTSVVL True PC9_epitope_Rep3 960.51277627 960.51166993586 74.276 2 0.033437656323830243 0.0063949208686050795 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 64483 16269 LQVLEERDLE True PC9_epitope_Rep1 1242.6455813446998 1242.64448993586 67.397 2 0.0334148702374226 0.0063949208686050795 0.9438714419765777 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 132432 22979 VYNPVIYVF True PC9_epitope_Rep1 1112.5906326678798 1112.5895299358601 93.186 2 0.033408377944853754 0.006417038502231014 0.9438714419765777 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 17384 10778 EHFDASHVAL True PC9_epitope_Rep4 1124.5250722892 1124.52343490379 49.217 3 0.033406418646101804 0.006417038502231014 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH'] 65751 22118 LSIEQLTTL True PC9_epitope_Rep2 1016.5753765265599 1016.5748749679301 90.553 1 0.03340101890984812 0.006417038502231014 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 119062 9670 VEHDFIMAT True H1975_Epitope_Rep3 1061.4851816231699 1061.48408993586 42.215 2 0.033386718940340426 0.006417038502231014 0.9438714419765777 ['ENSG00000164163|ENST00000296577|ABCE1', 'ENST00000510321.1_1_4:146044588-146044753:+|nuORF', 'ENST00000515678.5_1_4:146042303-146044753:+|nuORF', 'ENST00000444025.1_1_7:23602199-23602811:-|nuORF'] 41765 4335 IDQEELNK True NCI_RA007_Epitope_Rep2 987.48728979815 987.48618993586 21.499 2 0.033375981978292155 0.006417038502231014 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 68642 19028 LVAPPLPAA True PC9_epitope_Rep3 847.51673945163 847.51564993586 78.412 2 0.03333699215096502 0.006417038502231014 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 7595 19847 ASIDILHSI True PC9_epitope_Rep2 967.5338460677501 967.53274993586 81.734 2 0.033298102121247106 0.00643915003219575 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'PSMD11|p.R20L|1|0.1|ENSG00000108671|chr17:32444582-32444582|G/T|missense_variant'] 4280 20307 AIISELVSI True PC9_epitope_Rep6 943.5589981864299 943.55790993586 90.818 2 0.03328169132541165 0.00643915003219575 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 22799 19636 EVDPSDWIGLY True H1975_Epitope_Rep1 1292.5924831426798 1292.5913899358602 81.742 2 0.033274572206397936 0.00643915003219575 0.9438714419765777 ['ENSG00000138411|ENST00000644978|HECW2'] 84672 19694 QHFDAAYIF True PC9_epitope_Rep2 1110.5134449763398 1110.5123499358601 81.139 2 0.033272555823370714 0.00643915003219575 0.9438714419765777 ['ENSG00000023608|ENST00000216294|SNAPC1'] 47446 20247 IYILDPELL True NCI_RA007_Epitope_Rep5 1087.61651306255 1087.61540993586 84.821 2 0.033269311102446505 0.00643915003219575 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 14816 14472 DYAYLREHF True PC9_epitope_Rep6 1212.5563724174797 1212.55471490379 67.552 3 0.03326894153870745 0.00643915003219575 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 37461 19282 GYADIVQLL True NCI_RA007_Epitope_Rep5 990.5385970950199 990.53750993586 81.039 2 0.033256791936518024 0.006461849790737249 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 104572 5132 SSSPPILTK True NCI_RA007_Epitope_Rep5 928.52294703088 928.52184993586 26.435 2 0.03324023511672774 0.006461849790737249 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A'] 1189 8073 AEDDLNTVAA True H1975_Epitope_Rep2 1017.46146897313 1017.4608749679301 36.0 1 0.03320537280600676 0.006483951071461418 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 131816 17712 VYAPPVGGF True PC9_epitope_Rep6 905.4647038787698 905.46360993586 80.762 2 0.03317840782565948 0.006483951071461418 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 14811 17089 DYAYLREHF True PC9_epitope_Rep3 1212.5563724174797 1212.55471490379 70.883 3 0.03314683124454992 0.006483951071461418 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 117841 16112 VAPEEHPLLL True PC9_epitope_Rep2 1116.6179100448799 1116.6168099358601 67.234 2 0.03312804739012307 0.006483951071461418 0.9438714419765777 ['ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 89593 6097 RESLPSTVSA True H1975_Epitope_Rep2 1045.54038800017 1045.53928993586 28.429 2 0.03312061699790427 0.006483951071461418 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2'] 106462 19298 SVVELVNKL True PC9_epitope_Rep3 999.5964463243099 999.59534993586 79.451 2 0.03311101607198476 0.006483951071461418 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 107634 21350 TAIDILTTC True PC9_epitope_Rep1 949.4790336135701 949.47792993586 86.953 2 0.033066423369415565 0.006518396107324015 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 17268 5460 EHDAAAESL True PC9_epitope_Rep3 941.4090394774499 941.40794993586 26.078 2 0.03305159603924529 0.006518396107324015 0.9438714419765777 ['ENST00000506320.1_1_1:115321857-115323228:-|nuORF', 'ENST00000474562.1_1_1:115321817-115323228:-|nuORF', 'ENST00000475335.5_1_1:115321747-115323228:-|nuORF', 'ENSG00000052723|ENST00000060969|SIKE1', 'nc|ENSG00000052723|Q9BRV8-2|SIKE1'] 113776 18077 TRDQFLDTL True PC9_epitope_Rep1 1107.5560380643099 1107.55547496793 74.326 1 0.033046566017941696 0.006518396107324015 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 23801 21841 EYLDRIGQLFF True PC9_epitope_Rep4 1399.7136013348697 1399.71250993586 92.214 2 0.03302410039687291 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000239857|Q7L5D6-2|GET4', 'ENSG00000239857|ENST00000265857|GET4'] 25376 10705 FEIGGTIHP True H1975_Epitope_Rep1 969.49198125577 969.49088993586 46.136 2 0.033013240565143646 0.006518396107324015 0.9438714419765777 ['ENSG00000138678|ENST00000264409|GPAT3'] 71087 6613 METAAAVAA True H1975_Epitope_Rep3 833.3953039896098 833.39420993586 30.389 2 0.033000602864051855 0.006518396107324015 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 2703 3959 AETKPPM[Oxidation]AP True H1975_Epitope_Rep3 956.4637182830398 956.46262993586 20.358 2 0.03299721078953184 0.006518396107324015 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 40008 3818 HQSRTVATL True NCI_RA007_Epitope_Rep4 1011.5461420869499 1011.54504993586 20.873 2 0.03298091735021602 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000557212.5_1_15:91479504-91485975:+|nuORF'] 102255 7854 SPTGKEFVSA True PC9_epitope_Rep1 1021.5080252427299 1021.50692993586 35.037 2 0.032973058182367516 0.006518396107324015 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766642-105766726:+|nuORF'] 4623 16143 ALAPGLPTA True PC9_epitope_Rep4 809.46470387877 809.46360993586 70.033 2 0.032953669626721055 0.006518396107324015 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 110053 16134 THYDHVLIEL True PC9_epitope_Rep4 1238.6295373577398 1238.62789490379 69.999 3 0.03295361721172152 0.006518396107324015 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 2686 11609 AETAVSVIP True H1975_Epitope_Rep3 885.48074786573 885.4801949679301 49.786 1 0.032935289869737504 0.006518396107324015 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 31548 10782 GEFQSFSSA True NCI_RA007_Epitope_Rep1 958.4032258210199 958.40212993586 45.935 2 0.032914544117683804 0.006518396107324015 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 103534 16880 SRDDNMFQI True PC9_epitope_Rep2 1124.49205790876 1124.49147496793 70.176 1 0.03290824640354923 0.006518396107324015 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 6232 4904 APRGPGTVPA True PC9_epitope_Rep3 921.5032146458099 921.50210993586 23.961 2 0.032897104977349274 0.006518396107324015 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 76471 13955 NTDFGDEFY True H1975_Epitope_Rep1 1106.4192698079798 1106.41816993586 58.833 2 0.03289444160957511 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 75442 7497 NQGPHSPIL True PC9_epitope_Rep6 961.4981292653699 961.49702993586 38.086 2 0.032890877936690266 0.006518396107324015 0.9438714419765777 ['ENSG00000100147|ENST00000255784|CCDC134'] 717 18933 AAVLSVPAV True PC9_epitope_Rep4 825.4960040070499 825.4954549679301 80.915 1 0.032889692342801854 0.006518396107324015 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 128780 4351 VSQVGKEL True PC9_epitope_Rep6 858.4810822188998 858.47998993586 23.819 2 0.03287888516736753 0.006518396107324015 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 11725 16278 DHGGVIVAI True PC9_epitope_Rep3 879.48141657207 879.48030993586 67.751 2 0.03287880131690452 0.006518396107324015 0.9438714419765777 ['ENSG00000184985|ENST00000507866|SORCS2'] 130019 20125 VTPPGFQLV True PC9_epitope_Rep4 956.53311779176 956.53202993586 85.546 2 0.03286677579125258 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 108478 6708 TEETATTVVA True H1975_Epitope_Rep2 1020.4975201286799 1020.4969749679301 30.714 1 0.03286286602433975 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 39751 17592 HPYLFPVAA True PC9_epitope_Rep4 1013.5334521449298 1013.53234993586 75.682 2 0.032794000876346326 0.006518396107324015 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 31933 6619 GERIPDVAA True NCI_RA007_Epitope_Rep3 926.4821448480599 926.48104993586 33.096 2 0.03279271691278488 0.006518396107324015 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.I37L|1|0.44|ENSG00000182220|chrX:40589057-40589057|A/C|missense_variant'] 67333 21884 LTDQTLIYL True PC9_epitope_Rep5 1078.5910265906998 1078.59047496793 89.215 1 0.03278243460052939 0.006518396107324015 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 63258 17079 LPALAGVSA True PC9_epitope_Rep4 797.46470387877 797.4641549679301 73.691 1 0.03275320823649205 0.006518396107324015 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 125054 16580 VLPGHFNTF True PC9_epitope_Rep5 1030.5236157372199 1030.5225099358602 68.782 2 0.032745630229492714 0.006518396107324015 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 60519 21016 LIPDIDLKL True PC9_epitope_Rep5 1038.63249747986 1038.6314099358601 85.896 2 0.032739541360741975 0.006518396107324015 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 16385 5125 EELKALAER True NCI_RA007_Epitope_Rep4 1057.5767735088898 1057.57566993586 26.228 2 0.032734435088410264 0.006518396107324015 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 13855 6195 DRAPAQPAM True PC9_epitope_Rep1 955.45455020123 955.45344993586 28.644 2 0.03271933121782086 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 140810 13659 YYSPHGHILVL True PC9_epitope_Rep6 1297.68190728377 1297.68025490379 64.322 3 0.03270620152577434 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 75335 8083 NPYYGGESA True PC9_epitope_Rep4 956.3875757568799 956.3870249679301 38.543 1 0.03269877203075963 0.006518396107324015 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 123177 9400 VHGPPVQL True PC9_epitope_Rep6 845.47593726881 845.47484993586 46.363 2 0.03269788385795532 0.006518396107324015 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 26891 22917 FLFSKFIEL True PC9_epitope_Rep1 1142.6375828603 1142.63648993586 92.948 2 0.03267998379799591 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF', 'ENST00000496932.1_1_1:43830369-43830754:-|nuORF', 'ENST00000468865.6_1_1:43829752-43830910:-|nuORF', 'ENST00000464204.5_1_1:43830107-43833598:-|nuORF'] 102219 12705 SPSPPSVAV True PC9_epitope_Rep5 839.4388830537499 839.43778993586 53.875 2 0.032665648596859186 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'COP1|p.T329Qfs*25|1|0.31|ENSG00000143207|chr1:176116666-176116666|G/-|frameshift_variant', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 48768 7911 KEQLPPLAA True H1975_Epitope_Rep2 965.5545815123298 965.55348993586 35.377 2 0.032661497659967426 0.006518396107324015 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 126047 13166 VPAPSPLSA True PC9_epitope_Rep5 837.45961849833 837.45852993586 55.647 2 0.032627032893695916 0.006518396107324015 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 2685 11506 AETAVSVIP True H1975_Epitope_Rep3 885.48074786573 885.4801949679301 49.382 1 0.03259121496204849 0.006518396107324015 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 64088 11017 LQEDPPAGV True PC9_epitope_Rep2 924.4552613938798 924.45416993586 47.697 2 0.032588091001464356 0.006518396107324015 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 12989 7304 DLQDDIQNR True H1975_Epitope_Rep1 1115.52071518475 1115.5196099358602 33.106 2 0.03258453744027489 0.006518396107324015 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1-LYPLA1|1|fusion', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 2513 5266 AEQRLKAIVA True H1975_Epitope_Rep2 1097.6556925359298 1097.65458993586 25.323 2 0.03258045302020224 0.006518396107324015 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000530314.5_1_16:70543112-70557304:-|nuORF', 'ENST00000562200.5_1_16:70543798-70557434:-|nuORF', 'nc|ENSG00000103051|Q9H9E3-2|COG4'] 6470 8344 APTAITEA True PC9_epitope_Rep5 772.3966838886 772.39613496793 37.036 1 0.032577468208267166 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 5167 21288 ALPEDLVEV True PC9_epitope_Rep1 983.5175272972699 983.51642993586 86.71 2 0.03255881038163716 0.006518396107324015 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 6230 4618 APRGPGTVPA True PC9_epitope_Rep3 921.5032146458099 921.50210993586 22.859 2 0.032558100331608116 0.006518396107324015 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 106785 20797 SYGDILHVI True PC9_epitope_Rep1 1015.53384606775 1015.53274993586 84.822 2 0.03254956069895811 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 22710 18406 ETVWTILP True H1975_Epitope_Rep1 957.5171333744498 957.51658496793 76.71 1 0.03253284608647971 0.006518396107324015 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 44910 11235 IQDNKFIEA True PC9_epitope_Rep5 1076.55022440788 1076.54912993586 48.205 2 0.032528370549677645 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 11784 6357 DHINGRVL True PC9_epitope_Rep3 922.49846361854 922.49736993586 29.478 2 0.03252638145893262 0.006518396107324015 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 40520 12758 HSIPVTVEV True PC9_epitope_Rep4 979.53384606775 979.53274993586 56.936 2 0.03251408455371007 0.006518396107324015 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5', 'HDAC5|p.L646Sfs*24|1|0.2|ENSG00000108840|chr17:44086686-44086686|G/-|frameshift_variant'] 120530 14881 VGAAALFL True H1975_Epitope_Rep3 760.44832553864 760.4477749679301 62.626 1 0.03247987440417728 0.006518396107324015 0.9438714419765777 ['ENST00000257700.6_1_7:105205780-105205849:+|nuORF'] 46737 14300 IVAPGKGILAA True PC9_epitope_Rep5 1008.6331661861998 1008.63206993586 60.007 2 0.03246367359132869 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 73853 11403 NHFMDNTTL True PC9_epitope_Rep6 1091.47059418819 1091.46948993586 54.92 2 0.032462976751264805 0.006518396107324015 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000556170.5_1_14:75573136-75593624:-|nuORF'] 32448 12941 GGHGPSFPL True PC9_epitope_Rep2 867.42390169595 867.42280993586 55.072 2 0.03245544298687044 0.006518396107324015 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 39191 7083 HLGALLAR True PC9_epitope_Rep4 849.51847078713 849.51736993586 34.511 2 0.03244678089414577 0.006518396107324015 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 29307 15351 FVDPNGKISL True PC9_epitope_Rep4 1088.5866099165999 1088.58550993586 66.98 2 0.03240580724396491 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 1213 6713 AEDEPPAPP True H1975_Epitope_Rep3 921.4079768482899 921.4074249679301 30.778 1 0.03238642274296826 0.006518396107324015 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 59872 9017 LHGPSGSAF True PC9_epitope_Rep5 871.4188163155101 871.41770993586 39.629 2 0.03238295152079473 0.006518396107324015 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 112328 16825 TMLGKFYHF True PC9_epitope_Rep4 1142.55828699378 1142.5566449037901 72.691 3 0.03238139792130821 0.006518396107324015 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 136329 8428 YHADIYDKV True PC9_epitope_Rep4 1122.53457434374 1122.53346993586 39.882 2 0.032374911489703465 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 17486 9994 EHGPNPIL True PC9_epitope_Rep3 875.45011644379 875.44900993586 43.397 2 0.0323618446758292 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 24263 18593 FAADIISVL True NCI_RA007_Epitope_Rep4 947.53278343859 947.53168993586 80.425 2 0.03236008119130723 0.006518396107324015 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 13845 10846 DRAGSIVL True PC9_epitope_Rep4 829.46576650793 829.46466993586 49.479 2 0.03235969344077667 0.006518396107324015 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 120265 16067 VFPDKGYSF True PC9_epitope_Rep2 1058.5072969667401 1058.5061899358602 67.058 2 0.032343668853624434 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 46812 11072 IVDSATALY True H1975_Epitope_Rep1 951.49131254943 951.4907649679301 47.552 1 0.032342793794859666 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 68226 20017 LTQPVYDQI True PC9_epitope_Rep4 1075.55497543515 1075.5538699358601 85.129 2 0.03233151256557656 0.006518396107324015 0.9438714419765777 ['ENSG00000189233|ENST00000413272|NUGGC'] 35575 13207 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 62.451 2 0.03231962112700608 0.006518396107324015 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 114142 17853 TRSPLLTQL True PC9_epitope_Rep6 1027.60259433391 1027.6014899358602 81.3 2 0.03227843796368723 0.006518396107324015 0.9438714419765777 ['ENSG00000119411|ENST00000374183|BSPRY'] 70943 4304 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 21.667 2 0.032267868257631026 0.006518396107324015 0.9438714419765777 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 88197 23272 QYAPLLAVF True PC9_epitope_Rep3 1020.5644179200399 1020.56332993586 94.793 2 0.0322667602131906 0.006518396107324015 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 1291 7431 AEDSPAIGP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 33.562 2 0.032246872700579174 0.006518396107324015 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 132746 17697 VYSLQQFGF True NCI_RA007_Epitope_Rep4 1087.53384606775 1087.53274993586 76.576 2 0.03223258765074885 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000049656|Q96KA5-2|CLPTM1L', 'ENSG00000049656|ENST00000320895|CLPTM1L'] 73465 11351 NEVKSQNLL True PC9_epitope_Rep2 1043.5611234447501 1043.56002993586 48.985 2 0.03223071119653907 0.006518396107324015 0.9438714419765777 ['ENST00000451029.5_1_7:89905415-89916830:+|nuORF', 'ENST00000475031.5_1_7:89901258-89916830:+|nuORF', 'nc|ENSG00000105792|A5D8W1-2|CFAP69', 'nc|ENSG00000105792|A5D8W1-5|CFAP69', 'ENSG00000105792|ENST00000389297|CFAP69'] 106088 12008 SVMRLTISY True NCI_RA007_Epitope_Rep5 1068.56376629704 1068.5626699358602 52.849 2 0.03222788224022959 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 13850 12222 DRAGVTVL True PC9_epitope_Rep1 829.46576650793 829.46521496793 51.871 1 0.0322218500808645 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000185513|Q9Y468-2|L3MBTL1', 'nc|ENSG00000185513|Q9Y468-3|L3MBTL1'] 52332 15635 KPEEQWWNA True PC9_epitope_Rep5 1186.5407223533398 1186.5396299358601 65.15 2 0.03222047043220443 0.006518396107324015 0.9438714419765777 ['ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 89337 4925 REMEEAPVA True H1975_Epitope_Rep3 1030.4753452154598 1030.4742499358601 24.07 2 0.03221059698101386 0.006518396107324015 0.9438714419765777 ['ENSG00000102302|ENST00000375135|FGD1'] 107080 16298 SYLTSASSL True PC9_epitope_Rep4 927.45492704071 927.4543749679301 70.649 1 0.032206904154974667 0.006518396107324015 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 86228 16027 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.46262993586 66.46 2 0.03215738408339681 0.006540747710738301 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 113646 6547 TRDEDHIAL True PC9_epitope_Rep2 1068.51998690876 1068.5188899358602 30.596 2 0.03215335503243287 0.006540747710738301 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 125663 23851 VMPSSFFLL True PC9_epitope_Rep1 1039.5412399473098 1039.5401499358602 96.542 2 0.0321383428773986 0.006540747710738301 0.9438714419765777 ['ENSG00000143155|ENST00000367833|TIPRL'] 40035 7628 HQVPAVSSV True PC9_epitope_Rep1 922.4872302285 922.48612993586 34.162 2 0.032134936075833384 0.006540747710738301 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 1388 8624 AEEFKVPAA True H1975_Epitope_Rep2 960.4916469025998 960.49054993586 38.129 2 0.032113853312881836 0.006581814012154569 0.9438714419765777 ['ENSG00000120686|ENST00000239878|UFM1', 'nc|ENSG00000120686|P61960-2|UFM1'] 32715 6901 GHSGPITSI True PC9_epitope_Rep6 867.4450310633501 867.44392993586 35.463 2 0.03208617231795719 0.006581814012154569 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF', 'PRPF19|p.F388L|1|0.17|ENSG00000110107|chr11:60898250-60898250|A/G|missense_variant'] 30193 19025 FYVGHIDAF True PC9_epitope_Rep4 1067.50763131991 1067.50652993586 81.271 2 0.032033528967395156 0.006581814012154569 0.9438714419765777 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 91800 8011 RPLLKAITA True PC9_epitope_Rep6 981.63350053937 981.63240993586 40.286 2 0.032024554405780545 0.006581814012154569 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 46527 7924 ITQIEHEVSSS True PC9_epitope_Rep3 1228.5935457718401 1228.59244993586 35.459 2 0.03201997490106226 0.006581814012154569 0.9438714419765777 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 92099 11010 RPWSPAVSA True PC9_epitope_Rep5 969.5032146458099 969.50210993586 47.339 2 0.03201466367838862 0.006581814012154569 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 72613 14374 MVVESVERI True PC9_epitope_Rep5 1060.5586809166 1060.55758993586 60.289 2 0.031992132141810944 0.006581814012154569 0.9438714419765777 ['ENSG00000166886|ENST00000300131|NAB2', 'nc|ENSG00000166886|Q15742-3|NAB2', 'nc|ENSG00000166886|Q15742-2|NAB2'] 113125 11140 TQAPGNPVL True PC9_epitope_Rep4 895.4763311916299 895.4752299358599 50.628 2 0.03198636924309794 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 99926 23808 SLIEDLILL True PC9_epitope_Rep4 1027.6165130625498 1027.61540993586 99.996 2 0.03198547629567567 0.006581814012154569 0.9438714419765777 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF', 'ENST00000470510.5_1_1:245912867-246021878:-|nuORF', 'ENST00000366516.5_1_1:245912867-246093251:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-2|SMYD3', 'ENST00000366517.5_1_1:245912867-246116553:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-3|SMYD3', 'ENSG00000185420|ENST00000490107|SMYD3'] 123402 7057 VIDPGFAK True NCI_RA007_Epitope_Rep4 845.46470387877 845.46360993586 33.769 2 0.03197570697427059 0.006581814012154569 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 135001 11266 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.3808149679301 48.215 1 0.03196758408820522 0.006581814012154569 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 118082 6642 VATVSLPR True NCI_RA007_Epitope_Rep3 841.5021520166499 841.50104993586 33.194 2 0.031952707645501184 0.006581814012154569 0.9438714419765777 ['CON__P00761'] 48788 7719 KEQRISGLLVA True H1975_Epitope_Rep2 1212.71902106848 1212.7173749037902 34.643 3 0.03194971530021939 0.006581814012154569 0.9438714419765777 ['ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1'] 117111 15822 TYSHGNYLF True PC9_epitope_Rep3 1100.49270953176 1100.4916099358602 66.014 2 0.03192521562781167 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 114396 4953 TSDQLHILK True NCI_RA007_Epitope_Rep4 1053.58185888933 1053.5807699358602 25.517 2 0.03191037660168985 0.006581814012154569 0.9438714419765777 ['SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion', 'nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 18750 15125 ELDPLTGEWHY True H1975_Epitope_Rep2 1358.61428121642 1358.6131899358602 63.335 2 0.03190880802804205 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 102025 8889 SPPIPLAK True PC9_epitope_Rep2 821.50108938749 821.49998993586 39.546 2 0.03189545139238171 0.006581814012154569 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 48792 8176 KEQVPGFTP True H1975_Epitope_Rep2 1001.5181960036098 1001.51708993586 36.399 2 0.03188834425619745 0.006581814012154569 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 24560 20803 FALPGLLHA True PC9_epitope_Rep3 937.5385375253701 937.53744993586 85.29 2 0.031874331819426574 0.006581814012154569 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 5930 13121 APHPPLSVV True PC9_epitope_Rep5 915.51780208079 915.51670993586 55.474 2 0.03187397208801461 0.006581814012154569 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 87072 14087 QSEIASMLY True H1975_Epitope_Rep1 1040.48484727 1040.48374993586 59.352 2 0.03187327384746592 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000587317.1_1_19:11277236-11281082:-|nuORF'] 38685 4219 HHSDGSVSL True PC9_epitope_Rep3 937.42535824793 937.42426993586 21.344 2 0.03185350585710672 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000480730.5_1_6:33272047-33272452:-|nuORF', 'nc|ENSG00000231925|O15533-4|TAPBP'] 2689 9049 AETDSVVIA True H1975_Epitope_Rep2 903.45492704071 903.4543749679301 39.76 1 0.031836138060027865 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 88748 4550 RDFEGKVV True NCI_RA007_Epitope_Rep5 948.5028802926398 948.50178993586 24.157 2 0.031821354901964534 0.006581814012154569 0.9438714419765777 ['ENSG00000066379|ENST00000332435|POLR1H'] 130027 21535 VTPQSLFILFG True H1975_Epitope_Rep3 1220.6805103014397 1220.6794099358601 89.988 2 0.03181361829396942 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 34500 7440 GQDVGRYQV True PC9_epitope_Rep2 1020.49885754136 1020.49776993586 33.995 2 0.031804048249331356 0.006581814012154569 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 124885 22327 VLLNEILEQV True PC9_epitope_Rep4 1168.67033954056 1168.66924993586 94.119 2 0.0317992417154386 0.006581814012154569 0.9438714419765777 ['ENSG00000109805|ENST00000251496|NCAPG'] 84251 6073 QEVPGPAAA True H1975_Epitope_Rep2 838.4184819623398 838.41793496793 28.337 1 0.03179834771879337 0.006581814012154569 0.9438714419765777 ['ENSG00000146278|ENST00000336032|PNRC1'] 9238 5715 AVQKAIPMYK True NCI_RA007_Epitope_Rep4 1147.64235097091 1147.64071490379 28.597 3 0.03179128926212601 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000131100|P36543-3|ATP6V1E1', 'nc|ENSG00000131100|P36543-2|ATP6V1E1', 'ENSG00000131100|ENST00000253413|ATP6V1E1', 'ENST00000439215.1_1_1:43369124-43369580:+|nuORF', 'ENST00000481365.5_1_22:18080958-18102283:-|nuORF'] 17478 10015 EHGPENIVM True PC9_epitope_Rep4 1024.46478053176 1024.4636899358602 46.186 2 0.03178815095593243 0.006581814012154569 0.9438714419765777 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 8606 16662 AVAGILKQL True PC9_epitope_Rep2 911.58040233735 911.57930993586 69.334 2 0.03177611376745165 0.006581814012154569 0.9438714419765777 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4', 'nc|ENSG00000068878|Q14997-3|PSME4'] 68708 13565 LVDDPLEY True H1975_Epitope_Rep3 962.4596780679799 962.45858993586 57.46 2 0.03176404448470799 0.006581814012154569 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 83316 14470 QALLDLHAL True NCI_RA007_Epitope_Rep2 992.5654805492001 992.5649349679301 60.947 1 0.03174127739401848 0.006603535643042212 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 103637 19800 SRDLSLLI True PC9_epitope_Rep3 915.5389314481899 915.53782993586 81.393 2 0.0317407276821572 0.006603535643042212 0.9438714419765777 ['ENSG00000242550|ENST00000238508|SERPINB10'] 54359 14950 KYQEVTNNLEF True PC9_epitope_Rep4 1383.6670450652698 1383.66594993586 65.445 2 0.03172302522004747 0.006603535643042212 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 97735 6677 SHGDVIRPL True PC9_epitope_Rep2 992.5403284305199 992.53922993586 31.091 2 0.0317210918656954 0.006603535643042212 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 113006 9436 TPTFTYKAA True PC9_epitope_Rep4 998.5072969667398 998.50618993586 43.907 2 0.0317098433579233 0.006603535643042212 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000599648.1_1_19:7705628-7705700:+|nuORF'] 55902 23028 LDGLYLLTL True PC9_epitope_Rep2 1019.5902983147099 1019.5897749679301 94.07 1 0.03165882469780878 0.006603535643042212 0.9438714419765777 ['ENST00000590435.5_1_17:74559537-74560081:+|nuORF'] 98494 24887 SILDVLTGI True PC9_epitope_Rep5 929.54334812229 929.54224993586 100.89 2 0.031655980263785286 0.006603535643042212 0.9438714419765777 ['ENSG00000163781|ENST00000260810|TOPBP1'] 27368 19622 FMPPGLQEL True PC9_epitope_Rep6 1030.5157534754599 1030.51464993586 88.135 2 0.03164478689528038 0.006603535643042212 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 96380 9043 SEHGLVVIA True H1975_Epitope_Rep2 923.5076313199099 923.50652993586 39.737 2 0.03164236428401818 0.00662388264955306 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 132544 23484 VYPGLAVFF True PC9_epitope_Rep2 1011.5429541994698 1011.54184993586 95.803 2 0.0316413772995915 0.00662388264955306 0.9438714419765777 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 105546 7568 SVDPTQTEY True H1975_Epitope_Rep2 1038.45056993626 1038.4499749679298 34.064 1 0.03161703675124267 0.00662388264955306 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 31978 10182 GETEDTFIA True H1975_Epitope_Rep2 981.4291062156899 981.42855496793 44.167 1 0.03159354000785338 0.00662388264955306 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000522954.1_1_17:4859850-4860339:+|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 39190 9491 HLGALLAR True PC9_epitope_Rep3 849.51847078713 849.51736993586 41.457 2 0.03158955211907228 0.00662388264955306 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 39786 14638 HQDPQSIFV True PC9_epitope_Rep1 1069.51925863277 1069.5181699358602 61.128 2 0.03158851539882582 0.00662388264955306 0.9438714419765777 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 101509 12409 SPAAPVITA True PC9_epitope_Rep5 825.45961849833 825.45852993586 52.73 2 0.03158242943517004 0.00662388264955306 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 52312 11210 KPANVFITA True PC9_epitope_Rep2 959.54401682863 959.54346496793 48.445 1 0.03157241193517085 0.00662388264955306 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 23681 17331 EYGYIRTVL True PC9_epitope_Rep4 1112.5866099165999 1112.58550993586 74.67 2 0.031552994173614686 0.00662388264955306 0.9438714419765777 ['nc|ENSG00000057294|Q99959|PKP2', 'ENSG00000057294|ENST00000340811|PKP2'] 47372 14606 IYIAGHPAF True PC9_epitope_Rep4 987.51780208079 987.51670993586 64.112 2 0.03153395392483013 0.00662388264955306 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 47666 23953 IYPPLLGALSF True PC9_epitope_Rep2 1189.6746966450098 1189.67358993586 97.618 2 0.03152981676072783 0.00662388264955306 0.9438714419765777 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 102386 17731 SPVSIM[Oxidation]VV True PC9_epitope_Rep5 846.45209097018 846.45098993586 73.221 2 0.03152936799298302 0.00662388264955306 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 75903 5543 NRDRTQIAL True PC9_epitope_Rep4 1085.59415490853 1085.59304993586 28.085 2 0.03152713691213815 0.00662388264955306 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 105831 15062 SVIQGHQIIAV True PC9_epitope_Rep2 1163.66625721963 1163.6651699358601 63.193 2 0.03152461570951884 0.00662388264955306 0.9438714419765777 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2'] 433 12438 AALQAVNSV True PC9_epitope_Rep5 871.47633119163 871.4752299358599 52.844 2 0.03152184402820018 0.00662388264955306 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF', 'PTBP1|p.A147S|1|0.33|ENSG00000011304|chr19:804535-804535|G/T|missense_variant'] 42560 7123 IESPAVAA True H1975_Epitope_Rep2 756.40176926904 756.40122496793 32.331 1 0.03151911844861091 0.00662388264955306 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 7804 4912 ATAAAIGATPR True NCI_RA007_Epitope_Rep2 998.55089311422 998.54978993586 23.728 2 0.03150414216024671 0.00662388264955306 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000540626.5_1_11:71714575-71718510:-|nuORF'] 5594 12106 ANVGWNNSTFA True NCI_RA007_Epitope_Rep4 1179.5308859456302 1179.5297899358602 53.563 2 0.031432976351749346 0.006669111243525691 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24237017-24237290:+|nuORF', 'ENST00000498385.1_1_22:24236898-24237290:+|nuORF'] 96440 11020 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 47.417 1 0.03143106759867793 0.006669111243525691 0.9438714419765777 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 573 11310 AARLPLDAA True PC9_epitope_Rep3 896.5079656730799 896.50686993586 48.511 2 0.031429121142405377 0.006669111243525691 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 139286 6226 YTDKIM[Oxidation]TY True H1975_Epitope_Rep2 1049.47394861357 1049.47284993586 28.911 2 0.03142625680565764 0.006669111243525691 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 135291 10443 YCAEIAHNV True PC9_epitope_Rep3 1018.4542158480599 1018.45310993586 45.106 2 0.03141454936787216 0.006678865507776762 0.9438714419765777 ['ENSG00000144713|ENST00000429711|RPL32', 'ENST00000458542.1_1_3:25791186-25791384:+|nuORF'] 35006 11382 GRAPGGLSL True PC9_epitope_Rep3 826.4661008611 826.4650099358599 48.783 2 0.03141113296461793 0.006678865507776762 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 131708 18403 VWSDVTPLTF True NCI_RA007_Epitope_Rep5 1163.58627556343 1163.5857749679299 77.597 1 0.03138859276958141 0.006678865507776762 0.9438714419765777 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 132007 20493 VYGPLPQSF True PC9_epitope_Rep5 1006.5123823471798 1006.51187496793 83.866 1 0.03138267332553254 0.006678865507776762 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 21143 9170 ERDSQTQAIL True PC9_epitope_Rep3 1159.5833154413099 1159.5822099358602 40.213 2 0.03136978558463142 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1', 'ENST00000392357.1_1_17:80012338-80013241:+|nuORF'] 116396 10466 TWFNQPARKI True PC9_epitope_Rep6 1259.6774906096698 1259.67583490379 51.013 3 0.03134105433378565 0.006678865507776762 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000491523.5_1_16:89627367-89627472:+|nuORF'] 54948 6193 LAHAAFSAA True PC9_epitope_Rep6 857.43955176009 857.43844993586 32.277 2 0.03133749406492833 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'MMGT1|p.E37Kfs*7|1|0.46|ENSG00000169446|chrX:135971082-135971082|T/-|frameshift_variant', 'ENSG00000169446|ENST00000305963|MMGT1'] 16852 7782 EFSGNPIK True PC9_epitope_Rep1 890.4497820906199 890.44868993586 34.757 2 0.03132452063751673 0.006678865507776762 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 136028 21667 YFQNTQGLIF True PC9_epitope_Rep2 1229.6080736371698 1229.6069699358602 88.819 2 0.03131325326602449 0.006678865507776762 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000004059|ENST00000000233|ARF5', 'ENSG00000168374|ENST00000303436|ARF4', 'ENST00000605447.1_1_9:136944076-136944538:+|nuORF'] 65324 10819 LSELEDRVAV True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 46.694 2 0.03128879827540257 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH'] 47772 12491 IYQRDPLKL True PC9_epitope_Rep3 1144.6604435631998 1144.65880490379 53.071 3 0.03128402232830319 0.006678865507776762 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 133246 9602 WEEETVPTT True H1975_Epitope_Rep3 1090.4818700645399 1090.48127496793 41.947 1 0.03128104535006162 0.006678865507776762 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 29332 14394 FVDRGFYSV True PC9_epitope_Rep6 1088.52909504048 1088.5279899358602 67.263 2 0.0312801225239516 0.006678865507776762 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 40218 9273 HRGTGLVL True PC9_epitope_Rep3 851.49773534255 851.49662993586 40.611 2 0.031277418772375845 0.006678865507776762 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 71081 6502 METAAAVAA True H1975_Epitope_Rep2 833.3953039896098 833.39475496793 29.926 1 0.031275531676179635 0.006678865507776762 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 35535 17211 GTIGLIHAI True PC9_epitope_Rep2 893.53345214493 893.53234993586 71.459 2 0.031268619772941215 0.006678865507776762 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 60284 19252 LIENVASL True PC9_epitope_Rep1 857.4858332461699 857.48472993586 78.853 2 0.031255410477939505 0.006678865507776762 0.9438714419765777 ['ENSG00000176153|ENST00000389614|GPX2', 'nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1'] 40681 6265 HTLNQIDSVK True PC9_epitope_Rep3 1153.6091362663299 1153.60750490379 29.134 3 0.03125340569618497 0.006678865507776762 0.9438714419765777 ['CON__P12763'] 47374 13697 IYIAGHPAF True PC9_epitope_Rep6 987.51780208079 987.51670993586 64.472 2 0.031244352929966832 0.006678865507776762 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 5673 21362 APALLLIPAA True PC9_epitope_Rep4 948.60080342876 948.59970993586 90.337 2 0.031186912954437145 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 579 9313 AARLPLDAA True PC9_epitope_Rep6 896.5079656730799 896.50686993586 45.99 2 0.03118333024629538 0.006678865507776762 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 117558 10366 VAGGAVYL True H1975_Epitope_Rep1 748.4119400299201 748.41139496793 44.821 1 0.031178898703865816 0.006678865507776762 0.9438714419765777 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 2153 13959 AELYGPFTSA True H1975_Epitope_Rep3 1054.49712620586 1054.49657496793 59.01 1 0.031174880596260834 0.006678865507776762 0.9438714419765777 ['ENSG00000169217|ENST00000305596|CD2BP2'] 71490 14298 MKLHYVAVL True PC9_epitope_Rep4 1072.61032256664 1072.6092299358602 62.898 2 0.03117150827990659 0.006678865507776762 0.9438714419765777 ['ENSG00000128791|ENST00000262120|TWSG1', 'nc|ENSG00000128791|Q9GZX9-2|TWSG1'] 37641 9437 HADPTELAL True NCI_RA007_Epitope_Rep4 965.4818104948899 965.48070993586 43.159 2 0.03115232951260511 0.006678865507776762 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 69875 15432 LYAPYSTHF True PC9_epitope_Rep4 1097.51819600361 1097.5170899358602 67.293 2 0.03114073580028823 0.006678865507776762 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 607 13655 AASGHFICV True PC9_epitope_Rep1 903.4272728242299 903.42616993586 57.379 2 0.03112167895124849 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000465134.5_1_2:74650023-74652276:+|nuORF', 'ENST00000468778.5_1_2:74649977-74650720:+|nuORF'] 76842 8683 NVHAVFQEA True PC9_epitope_Rep4 1013.4930438849299 1013.49194993586 40.89 2 0.031116701235151138 0.006678865507776762 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 53841 12564 KYGNLSNFL True NCI_RA007_Epitope_Rep4 1054.54474510462 1054.54364993586 55.344 2 0.03111186477011339 0.006678865507776762 0.9438714419765777 ['FLT4|p.Q1201Rfs*12|1|0.11|ENSG00000037280|chr5:180611414-180611415|CT/-|frameshift_variant', 'nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4'] 58228 13884 LESTPSPVVF True H1975_Epitope_Rep3 1074.55972646242 1074.55917496793 58.714 1 0.03110769994970914 0.006678865507776762 0.9438714419765777 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 2709 8695 AETLAPVQA True H1975_Epitope_Rep2 898.47599683846 898.47488993586 38.406 2 0.03110738974514226 0.006678865507776762 0.9438714419765777 ['ENSG00000018408|ENST00000360632|WWTR1', 'ENST00000485244.1_1_3:149243755-149260220:-|nuORF', 'ENST00000471586.5_2_3:149238594-149258828:-|nuORF', 'ENST00000494754.1_2_3:149238594-149258041:-|nuORF'] 115589 23765 TVIDQIPFLAV True PC9_epitope_Rep1 1214.6910749851402 1214.68996993586 96.207 2 0.031104248367474063 0.006678865507776762 0.9438714419765777 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 25532 5152 FEQGGARVV True H1975_Epitope_Rep1 961.4981292653698 961.49702993586 24.883 2 0.03110095210638918 0.006678865507776762 0.9438714419765777 ['ENSG00000165898|ENST00000556816|ISCA2', 'ENST00000555139.1_1_14:74961475-74961700:+|nuORF'] 77450 10651 NYNNQSSNFGP True PC9_epitope_Rep2 1240.51087877704 1240.50978993586 46.281 2 0.031096176567488983 0.006678865507776762 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF'] 104270 8119 SSDTSALSY True H1975_Epitope_Rep2 929.3978060874099 929.39725496793 36.179 1 0.03107642323215603 0.006678865507776762 0.9438714419765777 ['ENSG00000121653|ENST00000241014|MAPK8IP1'] 20591 20358 EQELIYFTF True NCI_RA007_Epitope_Rep5 1188.57029114612 1188.56918993586 85.244 2 0.031056345909491762 0.006678865507776762 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5'] 135009 11381 YAGSGNVL True PC9_epitope_Rep3 779.38136817763 779.3808149679301 48.779 1 0.031032746167576522 0.006678865507776762 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 5227 12336 ALQEMVHQV True PC9_epitope_Rep1 1053.52771514149 1053.52660993586 52.307 2 0.031026504133219758 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 17191 15838 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50708496793 65.734 1 0.03101182376385658 0.006678865507776762 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 31439 9100 GEDPTSVAIA True H1975_Epitope_Rep1 958.46074069714 958.4601949679301 39.907 1 0.031010737099278964 0.006678865507776762 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 41162 20428 HYSPIYLSF True PC9_epitope_Rep2 1125.5494961318898 1125.54838993586 84.004 2 0.03100880091771315 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 60963 18105 LLAESVTEV True PC9_epitope_Rep3 959.5175272972699 959.51642993586 74.836 2 0.031001748516735015 0.006678865507776762 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 102966 7869 SQIQEFKEA True PC9_epitope_Rep2 1078.5294889632999 1078.52838993586 35.635 2 0.031001523550913866 0.006678865507776762 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 9163 15413 AVNPHFIAV True PC9_epitope_Rep1 966.5287011176599 966.52760993586 64.104 2 0.03098941424537928 0.006678865507776762 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 34643 18579 GQISEVVVV True PC9_epitope_Rep2 928.5229470308799 928.52184993586 76.817 2 0.03095160132522464 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 64193 19036 LQIDDNVTSAV True PC9_epitope_Rep5 1173.5877321154103 1173.5866299358602 78.25 2 0.030904013958151278 0.006678865507776762 0.9438714419765777 ['ENSG00000025772|ENST00000372813|TOMM34'] 70332 9276 LYPPRQPTF True NCI_RA007_Epitope_Rep5 1117.59202965021 1117.59092993586 42.326 2 0.0309002387231734 0.006678865507776762 0.9438714419765777 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 39186 9248 HLGALLAR True PC9_epitope_Rep1 849.51847078713 849.51736993586 40.425 2 0.030893004675139286 0.006678865507776762 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 46420 20132 ITLDGGAIYEA True PC9_epitope_Rep1 1121.5604547384098 1121.5593499358602 82.268 2 0.030878488853583623 0.006678865507776762 0.9438714419765777 ['ENSG00000163975|ENST00000296350|MELTF', 'nc|ENSG00000163975|P08582-2|MELTF', 'ENST00000473501.1_1_3:196753297-196754890:-|nuORF'] 43460 6285 IHSSSTVL True PC9_epitope_Rep5 842.44978209062 842.44868993586 29.152 2 0.03086298100329785 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 72065 18758 MRASSFLIV True PC9_epitope_Rep4 1022.5582869937799 1022.5577749679301 80.235 1 0.03086052065889214 0.006678865507776762 0.9438714419765777 ['ENSG00000124102|ENST00000243924|PI3'] 64062 16225 LQDQNTYTL True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 67.399 2 0.030858838508778005 0.006678865507776762 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 88609 10268 RALTVPEL True NCI_RA007_Epitope_Rep3 897.5283667644899 897.52726993586 47.464 2 0.030841804235211785 0.006678865507776762 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 100846 12874 SLSDIEIY True H1975_Epitope_Rep3 938.4596780679799 938.45912496793 54.744 1 0.030829139710842796 0.006678865507776762 0.9438714419765777 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 46466 11181 ITNIPFDVK True NCI_RA007_Epitope_Rep1 1045.58079626017 1045.5796899358602 47.49 2 0.03081533405057542 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 45851 8390 ISQGGEFAA True H1975_Epitope_Rep3 878.4133965818999 878.41284496793 37.256 1 0.030805564533246472 0.006678865507776762 0.9438714419765777 ['WDR93|p.D206E|1|0.28|ENSG00000140527|chr15:89712082-89712082|C/A|missense_variant'] 138486 14280 YRGQFPEL True PC9_epitope_Rep4 1008.5028802926398 1008.50178993586 62.829 2 0.030792244213252842 0.006678865507776762 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 107160 15047 SYNEHWNYL True PC9_epitope_Rep6 1224.5199869087598 1224.5188899358602 69.917 2 0.030788122123608916 0.006678865507776762 0.9438714419765777 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 83215 18743 QAADLAYQL True PC9_epitope_Rep5 991.4974605590301 991.49636993586 77.107 2 0.030753800307162373 0.006678865507776762 0.9438714419765777 ['ENSG00000147113|ENST00000398000|DIPK2B', 'DIPK2B|p.D262Y|1|0.55|ENSG00000147113|chrX:45154087-45154087|C/A|missense_variant'] 70845 4905 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 23.95 2 0.030734973097214777 0.006678865507776762 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 94285 17540 RWSPVRPLVF True PC9_epitope_Rep6 1255.71896149883 1255.7173049037901 80.108 3 0.030706083601904244 0.006678865507776762 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 129139 10716 VTDDALVY True H1975_Epitope_Rep1 894.4334633201399 894.4329149679301 46.181 1 0.0307010418045435 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 113378 18395 TQLGPPYHIL True PC9_epitope_Rep2 1137.61824439805 1137.6171499358602 76.087 2 0.030695655818627064 0.006678865507776762 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 37656 14753 HAGVISVL True PC9_epitope_Rep1 794.46503823194 794.46448496793 61.566 1 0.030688177908668072 0.006678865507776762 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 63242 10641 LPAEAVEAA True PC9_epitope_Rep4 869.4494477374499 869.44834993586 48.68 2 0.030686652147262822 0.006678865507776762 0.9438714419765777 ['ENSG00000130706|ENST00000253003|ADRM1'] 101019 12208 SLTGRLDEV True PC9_epitope_Rep2 988.5189242795999 988.51782993586 52.269 2 0.0306816554621447 0.006678865507776762 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6'] 24641 11475 FASGAVEL True H1975_Epitope_Rep2 792.40176926904 792.40122496793 49.193 1 0.030658372710043798 0.006678865507776762 0.9438714419765777 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF', 'ENSG00000123600|ENST00000375258|METTL8', 'nc|ENSG00000123600|Q9H825-2|METTL8', 'nc|ENSG00000123600|Q9H825|METTL8', 'ENST00000428182.2_1_12:15408356-15408710:-|nuORF'] 3174 11822 AGEGLLAVQ True NCI_RA007_Epitope_Rep5 856.4654321547598 856.4648849679301 52.131 1 0.030652278804847482 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 137847 8502 YPIEHGIITN True NCI_RA007_Epitope_Rep1 1155.5924235730297 1155.5913299358601 37.071 2 0.030648757521045462 0.006678865507776762 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 9138 4993 AVLTHSGFPAK True NCI_RA007_Epitope_Rep3 1126.6134933707797 1126.6118549037901 26.638 3 0.030636709966575738 0.006678865507776762 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 136740 15066 YINGGELFY True H1975_Epitope_Rep3 1074.5022115862998 1074.5016749679298 63.344 1 0.03062244549092622 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF'] 101074 21347 SLTSLSLSV True PC9_epitope_Rep3 905.5069626135701 905.50586993586 87.408 2 0.03061813999117393 0.006678865507776762 0.9438714419765777 ['ENST00000467638.1_1_7:139757417-139762332:-|nuORF'] 103832 9882 SRIARALAL True PC9_epitope_Rep4 969.6083484206899 969.60724993586 45.661 2 0.030602553642927455 0.006678865507776762 0.9438714419765777 ['ENSG00000142871|ENST00000451137|CCN1'] 102323 5861 SPVFTSRSA True PC9_epitope_Rep2 950.48214484806 950.48104993586 27.941 2 0.030597885218864453 0.006678865507776762 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 47369 15287 IYIAGHPAF True PC9_epitope_Rep2 987.51780208079 987.51670993586 64.079 2 0.03058131335203734 0.006678865507776762 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 82504 9531 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43364496793 41.632 1 0.030570036490543708 0.006678865507776762 0.9438714419765777 ['ENSG00000168143|ENST00000306858|FAM83B', 'FAM83B|p.M1000Ifs*12|1|0.2|ENSG00000168143|chr6:54941969-54941970|-/T|frameshift_variant', 'FAM83B|p.K141Rfs*2|1|0.3|ENSG00000168143|chr6:54870665-54870665|G/-|frameshift_variant'] 105962 13650 SVLGKVNEI True PC9_epitope_Rep3 957.54949613189 957.54838993586 57.57 2 0.030565744896755717 0.006678865507776762 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 73755 7295 NHAPSVQI True PC9_epitope_Rep2 864.44536541652 864.44426993586 33.445 2 0.03056512534220527 0.006678865507776762 0.9438714419765777 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 43861 19115 ILDDSHLLV True PC9_epitope_Rep2 1023.56006081559 1023.5589699358601 78.896 2 0.030557436289794706 0.006678865507776762 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR'] 17484 9899 EHGPNPIL True PC9_epitope_Rep1 875.45011644379 875.44900993586 42.934 2 0.030553132403674344 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 59815 10425 LHDINAQL True PC9_epitope_Rep2 922.4872302285 922.48612993586 45.42 2 0.030551305325962872 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 130020 20998 VTPPGFQLV True PC9_epitope_Rep5 956.53311779176 956.53202993586 85.831 2 0.030537947081400497 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 85548 20700 QLLDLDPEV True PC9_epitope_Rep4 1040.5389910178399 1040.5378899358602 87.783 2 0.030534642201070383 0.006678865507776762 0.9438714419765777 ['ENSG00000113384|ENST00000265070|GOLPH3'] 120258 16887 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 69.782 2 0.03052646541328843 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 24138 17431 EYSKYLQQAF True PC9_epitope_Rep2 1275.6135529404298 1275.61244993586 72.301 2 0.030497660641994346 0.006678865507776762 0.9438714419765777 ['nc|ENSG00000162702|Q9Y2X9-2|ZNF281', 'ENSG00000162702|ENST00000367353|ZNF281'] 39838 7393 HQGGPAVAL True PC9_epitope_Rep2 848.4504507969599 848.44934993586 33.818 2 0.03049032979450164 0.006678865507776762 0.9438714419765777 ['ENSG00000231274|ENST00000612221|SBK3'] 70910 5966 M[Oxidation]ELESKLNEA True H1975_Epitope_Rep2 1178.5489044589801 1178.5478099358602 27.931 2 0.030477801787116943 0.0066968367160358385 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF', 'ENST00000572915.6_1_17:2570288-2573571:+|nuORF'] 3889 7970 AHDDGRWSL True PC9_epitope_Rep6 1055.47845644995 1055.47734993586 40.116 2 0.03045910042957726 0.0066968367160358385 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 109572 6132 THAVVGVAT True PC9_epitope_Rep5 853.4657665079299 853.46466993586 28.572 2 0.03045517625353258 0.0066968367160358385 0.9438714419765777 ['ENSG00000111671|ENST00000524270|SPSB2', 'nc|ENSG00000111671|Q99619-2|SPSB2', 'ENSG00000175093|ENST00000310546|SPSB4', 'ENSG00000171621|ENST00000328089|SPSB1'] 61232 10517 LLDPTQKALY True H1975_Epitope_Rep1 1160.64412479272 1160.64302993586 45.406 2 0.030436245179025583 0.0066968367160358385 0.9438714419765777 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A'] 35883 21401 GVAETLVLV True PC9_epitope_Rep5 899.5327834385898 899.5322349679301 87.382 1 0.030412948307863372 0.0066968367160358385 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 91531 14924 RPADVIFAT True PC9_epitope_Rep3 988.5341804209199 988.53308993586 62.539 2 0.0303820887389258 0.0066968367160358385 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 34864 7900 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42828993586 39.813 2 0.03036783128086919 0.0066968367160358385 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 89493 5145 REQPPRFAQP True H1975_Epitope_Rep3 1224.6363540736797 1224.63469490379 24.894 3 0.030366174912735258 0.0066968367160358385 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 68818 7669 LVDSNNPKI True PC9_epitope_Rep3 998.53965972418 998.53856993586 34.497 2 0.030356947969114405 0.0066968367160358385 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 132543 23475 VYPGLAVFF True PC9_epitope_Rep2 1011.5429541994698 1011.5423749679301 95.767 1 0.030344936551192626 0.0066968367160358385 0.9438714419765777 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 43172 4795 IGSGC[Carbamidomethyl]NLDSAR True NCI_RA007_Epitope_Rep1 1148.5244209456298 1148.5233299358601 22.731 2 0.030338850000889813 0.0066968367160358385 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 137007 6162 YKKRLSVEL True NCI_RA007_Epitope_Rep4 1134.67609362734 1134.6744449037901 30.312 3 0.03033239390507743 0.0066968367160358385 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 25198 8535 FEADPPGQVA True H1975_Epitope_Rep1 1029.47672511445 1029.4761749679299 37.759 1 0.03030743461896494 0.0066968367160358385 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 61581 18925 LLGPPPVGV True PC9_epitope_Rep4 847.51673945163 847.51564993586 80.881 2 0.030296970900460785 0.0066968367160358385 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 115623 21692 TVISILNTI True PC9_epitope_Rep4 972.58554728744 972.58444993586 91.641 2 0.03029324388059799 0.0066968367160358385 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 120312 15589 VFPEKGYSF True PC9_epitope_Rep2 1072.5229470308798 1072.52184993586 65.239 2 0.030290809759542476 0.0066968367160358385 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 97654 7523 SHDAAGAAVL True PC9_epitope_Rep3 910.45084471978 910.44974993586 33.938 2 0.0302818147366478 0.0066968367160358385 0.9438714419765777 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENST00000496023.1_1_7:4798670-4799378:+|nuORF'] 78205 7330 PAPPPPPPP True PC9_epitope_Rep6 865.46978925921 865.46868993586 37.366 2 0.030274154972388275 0.0066968367160358385 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 69265 19502 LVPDVVNEV True PC9_epitope_Rep2 982.53351171458 982.53240993586 80.397 2 0.030272224950908186 0.0066968367160358385 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 97046 11136 SEYEMSIAA True H1975_Epitope_Rep2 999.4219126602699 999.4213749679301 47.871 1 0.03027071527622959 0.0066968367160358385 0.9438714419765777 ['nc|ENSG00000138138|Q8NBU5-2|ATAD1', 'ENSG00000138138|ENST00000680024|ATAD1'] 40110 8581 HRDGLRLSI True PC9_epitope_Rep5 1065.60432566941 1065.60322993586 37.948 2 0.03026087388483359 0.0066968367160358385 0.9438714419765777 ['ENSG00000115687|ENST00000234040|PASK', 'nc|ENSG00000115687|Q96RG2-2|PASK', 'ENST00000493544.1_1_2:242054361-242072488:-|nuORF', 'nc|ENSG00000115687|Q96RG2-4|PASK'] 68815 6823 LVDSNNPKI True PC9_epitope_Rep2 998.53965972418 998.53856993586 31.65 2 0.030257181455132415 0.0066968367160358385 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 126867 14980 VPTNIIAA True PC9_epitope_Rep1 797.4647038787699 797.4641549679301 62.441 1 0.030243550022812093 0.0066968367160358385 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 69367 21422 LVQDILLNV True PC9_epitope_Rep4 1025.6120963884498 1025.61098993586 90.576 2 0.030231302555514126 0.0066968367160358385 0.9438714419765777 ['ENSG00000116922|ENST00000486637|C1orf109', 'ENST00000464178.1_1_1:38148797-38151999:-|nuORF'] 77662 6303 PAAAAAAAAAA True PC9_epitope_Rep2 825.4344663796498 825.43336993586 29.644 2 0.030226225532348855 0.0066968367160358385 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 7952 17365 ATDIPCLLY True H1975_Epitope_Rep2 1007.4997690581499 1007.49917496793 72.088 1 0.03021428081535491 0.0066968367160358385 0.9438714419765777 ['ENSG00000135249|ENST00000257700|RINT1', 'ENST00000474123.1_1_7:105190513-105195680:+|nuORF'] 93771 11081 RTSTGIIGV True PC9_epitope_Rep5 902.5185303567799 902.51742993586 47.612 2 0.030167413019478322 0.0066968367160358385 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 31228 15312 GDLGIEIPAEK True PC9_epitope_Rep4 1140.60265390356 1140.60154993586 66.83 2 0.030160310280022543 0.0066968367160358385 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM', 'ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 34989 10711 GRADGYVL True PC9_epitope_Rep5 849.43446637965 849.43336993586 46.19 2 0.03015321703776416 0.0066968367160358385 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 97205 18232 SFITSSWTF True NCI_RA007_Epitope_Rep3 1074.5022115863 1074.50110993586 79.832 2 0.030136785424685026 0.0066968367160358385 0.9438714419765777 ['ENSG00000116209|ENST00000234831|TMEM59', 'TMEM59|p.I177Nfs*7|1|0.1|ENSG00000116209|chr1:54043386-54043387|-/T|frameshift_variant'] 52477 8189 KPLEPVSTV True PC9_epitope_Rep4 968.55424715916 968.55314993586 38.958 2 0.03011679100213986 0.0066968367160358385 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 633 10053 AATATFAAA True PC9_epitope_Rep5 793.3970182417698 793.39646496793 43.648 1 0.03010663780204953 0.0066968367160358385 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 132043 15031 VYIDQTMVL True NCI_RA007_Epitope_Rep3 1080.5525329069999 1080.5514299358601 66.585 2 0.03007380593642051 0.006741316270566728 0.9438714419765777 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 1233 12370 AEDILGVQAA True H1975_Epitope_Rep2 985.5080252427299 985.50692993586 52.667 2 0.030062864088931527 0.006741316270566728 0.9438714419765777 ['ENSG00000119227|ENST00000412723|PIGZ', 'PIGZ|p.H312Lfs*39|1|0.11|ENSG00000119227|chr3:196947952-196947964|GAGCCGCGCGTGC/-|frameshift_variant'] 71073 5508 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38966496793 26.238 1 0.03004488737985283 0.006741316270566728 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 43965 18806 ILFYRSNV True PC9_epitope_Rep4 1010.5549158654999 1010.55380993586 80.422 2 0.030026831557650804 0.006741316270566728 0.9438714419765777 ['OR5L2|p.A188Lfs*3|1|0.12|ENSG00000205030|chr11:55827780-55827781|GC/-|frameshift_variant', 'ENSG00000205030|ENST00000378397|OR5L2'] 89671 5405 REVEHFLKA True NCI_RA007_Epitope_Rep4 1127.60874234351 1127.60710490379 27.362 3 0.030026303506281576 0.006741316270566728 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 120452 19032 VFTYVGALF True NCI_RA007_Epitope_Rep4 1015.5378688190298 1015.53676993586 82.329 2 0.030016344302978854 0.006741316270566728 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 86748 5033 QRLETQVSA True PC9_epitope_Rep4 1030.5407223533398 1030.5396299358601 25.989 2 0.03001569956939908 0.006741316270566728 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 21299 8852 ERIQHAVQL True PC9_epitope_Rep3 1092.60399131624 1092.60288993586 39.001 2 0.030015008852237044 0.006741316270566728 0.9438714419765777 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF', 'nc|ENSG00000110619|P49589-2|CARS1', 'nc|ENSG00000110619|P49589|CARS1', 'ENSG00000110619|ENST00000380525|CARS1'] 31819 8837 GEMWNNTAA True H1975_Epitope_Rep2 992.4021802752 992.40108993586 38.958 2 0.030010815265557655 0.006757990867579908 0.9438714419765777 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENST00000446155.1_1_1:45997278-45997635:+|nuORF', 'ENST00000507778.1_1_4:41844266-41844645:-|nuORF', 'nc|ENSG00000124097|B2RPK0|HMGB1P1'] 27107 18588 FLQEGDLISA True PC9_epitope_Rep6 1091.54989005471 1091.54937496793 84.14 1 0.03000651578250978 0.006757990867579908 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-3|EXOSC2'] 77665 5602 PAAAAAAAAAA True PC9_epitope_Rep6 825.4344663796498 825.43336993586 29.61 2 0.029996221724184848 0.006757990867579908 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 79936 17797 PIRALDVL True PC9_epitope_Rep6 895.5491022090699 895.54800993586 81.09 2 0.029989683495647342 0.006757990867579908 0.9438714419765777 ['OPRL1|p.R162L|1|0.62|ENSG00000125510|chr20:64098053-64098053|G/T|missense_variant'] 102309 5912 SPVFRTGSE True PC9_epitope_Rep6 978.4770594676199 978.47596993586 31.01 2 0.029982682129470035 0.006757990867579908 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 72591 8021 MVRPVAVAA True PC9_epitope_Rep4 912.5215075622399 912.52040993586 38.303 2 0.029957001596160878 0.006757990867579908 0.9438714419765777 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 105795 21167 SVIIPGMTL True PC9_epitope_Rep4 929.52558988317 929.52448993586 89.582 2 0.029956835149219967 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 54637 19314 LADPSAFVAA True PC9_epitope_Rep1 960.4916469025999 960.49054993586 79.096 2 0.02995089046927293 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 108477 6602 TEETATTVVA True H1975_Epitope_Rep2 1020.4975201286799 1020.4969749679301 30.305 1 0.029944255647369994 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 103192 12188 SQPPVQVSV True PC9_epitope_Rep6 939.5025459394699 939.50144993586 58.243 2 0.029941827040508833 0.006757990867579908 0.9438714419765777 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 73829 13363 NHDVQVIL True PC9_epitope_Rep5 936.50288029264 936.50178993586 56.415 2 0.029940645623560656 0.006757990867579908 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 6915 22614 AQLDPSLVAFL True PC9_epitope_Rep4 1172.6441247927198 1172.64302993586 95.215 2 0.029937715251286343 0.006757990867579908 0.9438714419765777 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1'] 103464 5601 SRAPDGAAL True PC9_epitope_Rep5 856.4402800360799 856.43918993586 26.548 2 0.02991226389624912 0.006757990867579908 0.9438714419765777 ['ENSG00000120256|ENST00000239367|LRP11', 'nc|ENSG00000120256|Q86VZ4-2|LRP11'] 9572 10530 AYAPPPHVI True PC9_epitope_Rep4 963.5178020807899 963.51670993586 48.229 2 0.02989971738630273 0.006757990867579908 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 62139 20726 LLPDYYLVTV True PC9_epitope_Rep6 1194.65362684726 1194.65252993586 92.483 2 0.029895190078843868 0.006757990867579908 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 77022 23167 NVVEALIAL True PC9_epitope_Rep5 940.5593325395998 940.55822993586 94.101 2 0.029886829984294577 0.006757990867579908 0.9438714419765777 ['ENSG00000242028|ENST00000442995|HYPK', 'ENST00000458412.1_2_15:44093902-44094001:+|nuORF'] 60528 22564 LIPEYLNFI True PC9_epitope_Rep4 1120.61684741572 1120.61574993586 95.032 2 0.02986159429719747 0.006757990867579908 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 48534 4608 KEFPSQASP True NCI_RA007_Epitope_Rep3 989.4818104948898 989.48070993586 25.041 2 0.029861084051671254 0.006757990867579908 0.9438714419765777 ['ENSG00000138641|ENST00000402738|HERC3', 'ENST00000506714.5_1_4:89300148-89319290:+|nuORF', 'nc|ENSG00000138642|Q8IVU3-3|HERC6', 'nc|ENSG00000287542|Q15034-2|HERC3', 'ENSG00000138642|ENST00000264346|HERC6', 'nc|ENSG00000138642|Q8IVU3-2|HERC6'] 97406 16643 SGFGGITML True H1975_Epitope_Rep2 881.43168949833 881.4311449679301 69.249 1 0.029859979108563667 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000141219|Q9BSJ5-2|MTNAP1', 'nc|ENSG00000141219|Q9BSJ5-3|MTNAP1', 'ENSG00000141219|ENST00000535032|C17orf80'] 105035 5683 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 29.335 3 0.029846117859360494 0.006757990867579908 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 91954 8538 RPPPIGAEV True PC9_epitope_Rep2 934.5236157372199 934.52250993586 38.203 2 0.029832034961844417 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 47206 21710 IYAPPLPSL True PC9_epitope_Rep1 969.55351888317 969.55242993586 88.34 2 0.029823409075790838 0.006757990867579908 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1'] 60442 20898 LILEKILQA True PC9_epitope_Rep1 1039.6641319613097 1039.66302993586 85.205 2 0.0298099848370827 0.006757990867579908 0.9438714419765777 ['ENSG00000129474|ENST00000262713|AJUBA', 'AJUBA|p.G32Rfs*10|1|0.57|ENSG00000129474|chr14:22982162-22982173|CTTGCCCGGCCC/G|frameshift_variant'] 46816 11228 IVDSATALY True H1975_Epitope_Rep3 951.49131254943 951.4907649679301 48.29 1 0.029803416764405226 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 136335 15066 YHAPDTALSTL True PC9_epitope_Rep2 1187.58225281215 1187.5811499358601 63.208 2 0.02980243849054863 0.006757990867579908 0.9438714419765777 ['ENST00000263056.5_1_10:30726187-30726295:+|nuORF'] 108329 3223 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 16.962 2 0.029784646134328265 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 2768 7336 AEVDAAMAA True H1975_Epitope_Rep2 847.3745685450299 847.3740149679301 33.158 1 0.02976323392537446 0.006757990867579908 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 32701 10633 GHSGAVMEL True PC9_epitope_Rep1 899.4171020633501 899.41600993586 45.792 2 0.029708974023990076 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40'] 34992 9823 GRAEAYVL True PC9_epitope_Rep2 877.46576650793 877.46466993586 43.119 2 0.02969992937777087 0.006757990867579908 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 64476 13345 LQVEEVHQL True PC9_epitope_Rep3 1093.57677350889 1093.57566993586 56.365 2 0.029692872515209155 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000184047|Q9NR28-2|DIABLO', 'nc|ENSG00000184047|Q9NR28-3|DIABLO', 'ENSG00000184047|ENST00000464942|DIABLO'] 47368 15201 IYIAGHPAF True PC9_epitope_Rep2 987.51780208079 987.51670993586 63.732 2 0.029688811022154003 0.006757990867579908 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 1348 12246 AEEDPPWAP True H1975_Epitope_Rep2 1010.4345259492999 1010.43397496793 52.186 1 0.02967528840798841 0.006757990867579908 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 102888 13638 SQIDKLLHV True PC9_epitope_Rep6 1051.60259433391 1051.6014899358602 64.227 2 0.02967505906981618 0.006757990867579908 0.9438714419765777 ['ENSG00000166396|ENST00000398019|SERPINB7', 'SERPINB7|p.R82Efs*6|1|0.22|ENSG00000166396|chr18:63793182-63793182|A/-|frameshift_variant'] 27789 21841 FQEGDIILV True PC9_epitope_Rep5 1032.5491617787197 1032.5485749679299 89.045 1 0.029633133000564707 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 106385 19279 SVSTQLSLV True PC9_epitope_Rep5 932.51786165044 932.51731496793 79.201 1 0.02962876662076118 0.006757990867579908 0.9438714419765777 ['ENSG00000214194|ENST00000397764|SMIM30'] 89674 4633 REVGSLGTSA True NCI_RA007_Epitope_Rep4 975.4985231881899 975.4974299358599 24.237 2 0.02962634694722069 0.006757990867579908 0.9438714419765777 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.R1708Afs*23|1|0.17|ENSG00000185010|chrX:154928668-154928668|G/-|frameshift_variant', 'F8|p.E1756Nfs*16|1|0.1|ENSG00000185010|chrX:154906527-154906527|C/-|frameshift_variant'] 11100 5105 DEDKEKTFEEK True NCI_RA007_Epitope_Rep2 1396.6358045066397 1396.63414490379 24.481 3 0.02962369213798075 0.006757990867579908 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 44815 12093 IPVNCPYRA True PC9_epitope_Rep5 1031.5222358382298 1031.52112993586 51.51 2 0.02961804676641313 0.006757990867579908 0.9438714419765777 ['ENSG00000121691|ENST00000241052|CAT', 'ENST00000525707.1_1_11:34482779-34490041:+|nuORF'] 41138 19118 HYPPVQVLF True PC9_epitope_Rep4 1098.58621599378 1098.5851099358601 81.631 2 0.029605519273793783 0.006757990867579908 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 71908 10221 MPQSGTGVSV True PC9_epitope_Rep4 961.45388149489 961.45333496793 46.993 1 0.029604216668357372 0.006757990867579908 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 65261 11677 LSEGVTISY True H1975_Epitope_Rep3 967.4862271689901 967.48512993586 50.053 2 0.029586952286650113 0.006778809942254582 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 38573 18286 HHFPGPLLV True PC9_epitope_Rep3 1015.5603355991099 1015.55922993586 75.543 2 0.02958244223693831 0.006778809942254582 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI', 'nc|ENSG00000140525|Q9NVI1-4|FANCI'] 1792 10069 AEIASSLPAA True H1975_Epitope_Rep2 928.48656152216 928.48546993586 43.722 2 0.029574625977571448 0.006778809942254582 0.9438714419765777 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-2|TMEM131L'] 132720 21926 VYSGGVYLF True PC9_epitope_Rep1 1003.5014833103099 1003.50038993586 89.154 2 0.029552597405506968 0.006778809942254582 0.9438714419765777 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 113129 12120 TQAPGNPVL True PC9_epitope_Rep5 895.4763311916299 895.4752299358599 51.608 2 0.029552347964894782 0.006778809942254582 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 39192 9227 HLGALLAR True PC9_epitope_Rep5 849.51847078713 849.51736993586 40.438 2 0.029552335053073992 0.006778809942254582 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 123065 12425 VHADVYRVL True PC9_epitope_Rep5 1070.58727862294 1070.5861899358601 52.792 2 0.02952670601986531 0.006778809942254582 0.9438714419765777 ['ENST00000477409.1_1_2:97001567-97024936:+|nuORF', 'nc|ENSG00000121152|Q15003-2|NCAPH', 'chr2:96335848-96341675|495|15.55|0.71|4.44|+|ENST00000435975|NCAPH,NCAPH', 'ENSG00000121152|ENST00000240423|NCAPH'] 44511 17719 IPAALPVAA True PC9_epitope_Rep2 821.50108938749 821.49998993586 73.437 2 0.029516801832085663 0.006778809942254582 0.9438714419765777 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.L269Pfs*11|1|0.15|ENSG00000145715|chr5:87332616-87332620|TTACT/-|frameshift_variant', 'RASA1|p.N407Sfs*3|1|0.22|ENSG00000145715|chr5:87349329-87349332|CAAT/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1', 'RASA1|p.L146Sfs*24|1|0.5|ENSG00000145715|chr5:87268885-87268897|CTTTGGGGGCGGG/-|frameshift_variant'] 62215 19158 LLPSRQFGF True PC9_epitope_Rep1 1063.5814649665099 1063.58036993586 78.485 2 0.029500849670070866 0.006778809942254582 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF'] 32062 5448 GEVTNVTTA True H1975_Epitope_Rep2 890.4345259493 890.43397496793 25.982 1 0.029483387404539034 0.006778809942254582 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 26029 18575 FHDHALMII True PC9_epitope_Rep5 1095.55353596651 1095.5524299358601 76.473 2 0.029482628515464984 0.006778809942254582 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 1545 11544 AEEVAPPLP True H1975_Epitope_Rep2 921.4807478657299 921.47964993586 49.464 2 0.029459327614420234 0.006778809942254582 0.9438714419765777 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1', 'ENST00000522774.1_1_8:37728794-37730726:-|nuORF'] 13178 11521 DLTDYLM[Oxidation]K True H1975_Epitope_Rep1 1013.47394861357 1013.47337496793 49.3 1 0.029437836491670612 0.006778809942254582 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 130695 16312 VVDGFNVLY True H1975_Epitope_Rep2 1024.52294703088 1024.5223749679299 67.961 1 0.02938337220429248 0.006820099906480235 0.9438714419765777 ['nc|ENSG00000179889|Q6P996-2|PDXDC1', 'ENST00000570001.5_1_16:15069056-15125764:+|nuORF', 'nc|ENSG00000179889|Q6P996-3|PDXDC1', 'nc|ENSG00000179889|Q6P996-4|PDXDC1', 'nc|ENSG00000179889|Q6P996-5|PDXDC1', 'ENSG00000179889|ENST00000396410|PDXDC1'] 17743 13197 EHTGAIDVL True PC9_epitope_Rep1 953.4818104948899 953.48070993586 55.626 2 0.029382699585903213 0.006820099906480235 0.9438714419765777 ['TMED8|p.Q126L|1|0.34|ENSG00000100580|chr14:77343774-77343774|T/A|missense_variant', 'ENSG00000100580|ENST00000216468|TMED8'] 39761 8651 HPYPPGPGV True PC9_epitope_Rep3 919.4552018242299 919.45410993586 38.228 2 0.029378619642056042 0.006820099906480235 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 128346 10267 VSDNGPCLGY True H1975_Epitope_Rep2 1023.4331460503099 1023.43257496793 44.498 1 0.02937281620905228 0.006820099906480235 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 16640 8243 EESPVQYAA True H1975_Epitope_Rep1 992.4450906329998 992.44398993586 36.649 2 0.029371447485344183 0.006820099906480235 0.9438714419765777 ['ENSG00000143653|ENST00000366510|SCCPDH'] 123168 10404 VHGPPVQL True PC9_epitope_Rep2 845.47593726881 845.47484993586 45.342 2 0.029368922800811874 0.006820099906480235 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 14440 10813 DTLYEAVR True PC9_epitope_Rep2 965.4818104948899 965.48070993586 46.909 2 0.02935681054371169 0.006820099906480235 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF', 'ENST00000490335.4_1_6:35436211-35436651:+|nuORF'] 70799 10527 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 45.514 2 0.029346601802938993 0.006820099906480235 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 57113 5579 LEENPDPSA True H1975_Epitope_Rep3 970.4243551884199 970.42324993586 26.5 2 0.02934161069026545 0.006820099906480235 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF', 'ENST00000424089.5_1_2:86315699-86317049:-|nuORF'] 96885 7881 SETANYISA True H1975_Epitope_Rep2 954.42944056886 954.4288949679301 35.26 1 0.029339608466968658 0.006820099906480235 0.9438714419765777 ['ENST00000452385.5_1_3:48982572-49020700:+|nuORF', 'ENSG00000177479|ENST00000356401|ARIH2', 'ENST00000469038.1_1_3:49011147-49012531:+|nuORF', 'ENST00000465217.1_1_3:49008110-49012121:+|nuORF'] 108622 11188 TEIVKILSA True H1975_Epitope_Rep3 972.5855472874399 972.58444993586 48.132 2 0.029315757945025254 0.006820099906480235 0.9438714419765777 ['DIAPH2|p.R928Lfs*20|1|0.47|ENSG00000147202|chrX:97247778-97247778|G/-|frameshift_variant', 'nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 47703 16808 IYPVKYTQTF True PC9_epitope_Rep3 1258.65977485686 1258.6586699358602 69.801 2 0.029303870503949093 0.006820099906480235 0.9438714419765777 ['ENSG00000112378|ENST00000421351|PERP'] 8053 14756 ATDYTFAMY True H1975_Epitope_Rep1 1081.44264810485 1081.44207496793 61.982 1 0.0292782322625493 0.006820099906480235 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'FOXP4-CCND3|5|fusion', 'FOXP4-CCND3|1|fusion', 'FOXP4-CCND3|3|fusion', 'FOXP4-CCND3|2|fusion', 'FOXP4-CCND3|4|fusion', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 57316 9989 LEGNLPVSA True H1975_Epitope_Rep3 898.47599683846 898.47544496793 43.46 1 0.029269696929117385 0.006820099906480235 0.9438714419765777 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 94068 10755 RVVAELVSS True PC9_epitope_Rep5 958.5447451046199 958.54364993586 46.362 2 0.029267854979040227 0.006820099906480235 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1'] 114259 17420 TSAESFVNV True PC9_epitope_Rep1 952.45017601344 952.44962496793 71.802 1 0.02925478038970282 0.006820099906480235 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 42460 14917 IEQPTPFLP True H1975_Epitope_Rep3 1040.5542471591598 1040.5531499358601 62.764 2 0.029241551442476244 0.006820099906480235 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 116879 5679 TYNQKHSLF True NCI_RA007_Epitope_Rep5 1136.5614577979202 1136.55982490379 28.534 3 0.02923959785984146 0.006820099906480235 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 31799 12206 GEMEPPALP True H1975_Epitope_Rep1 939.4371688015898 939.43661496793 51.971 1 0.02922111581826 0.006820099906480235 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 60614 16562 LISQIVSSITA True NCI_RA007_Epitope_Rep1 1130.6546894764201 1130.65358993586 68.539 2 0.02921346484513927 0.006820099906480235 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000243910|ENST00000490341|TUBA4B', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 54674 7916 LAEAALELREE True H1975_Epitope_Rep3 1242.6455813446998 1242.64448993586 35.418 2 0.029195460525239803 0.006820099906480235 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 6240 6203 APRGTGIVSA True PC9_epitope_Rep3 927.5137793295098 927.51268993586 28.9 2 0.02918503703802727 0.006820099906480235 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 60251 13449 LIDVGTGYY True H1975_Epitope_Rep3 999.49131254943 999.4907749679301 57.005 1 0.029152205238344987 0.006820099906480235 0.9438714419765777 ['ENST00000553171.1_1_12:53691669-53691972:+|nuORF', 'ENST00000552341.5_1_12:53691573-53693126:+|nuORF', 'nc|ENSG00000123349|Q99471-3|PFDN5', 'ENSG00000123349|ENST00000334478|PFDN5', 'ENST00000548984.1_1_12:53691573-53691735:+|nuORF'] 44672 21299 IPLTLLPAA True PC9_epitope_Rep5 907.5742543277498 907.57314993586 86.978 2 0.02914023385823975 0.006820099906480235 0.9438714419765777 ['ENSG00000116903|ENST00000366645|EXOC8'] 6535 19477 APVETLENIIA True PC9_epitope_Rep6 1168.63395403184 1168.6328499358601 87.581 2 0.0291363518962765 0.006820099906480235 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 77125 19614 NYASTFTWW True NCI_RA007_Epitope_Rep5 1174.5083595959 1174.5072699358602 82.348 2 0.02913531953156724 0.006820099906480235 0.9438714419765777 ['nc|ENSG00000052802|Q15800-2|MSMO1', 'ENSG00000052802|ENST00000261507|MSMO1'] 126154 21916 VPFLNPYTV True PC9_epitope_Rep1 1048.5593325395998 1048.55822993586 89.115 2 0.029117172579897464 0.006820099906480235 0.9438714419765777 ['ENST00000403017.2_1_2:135957914-136028945:-|nuORF', 'nc|ENSG00000121988|Q5FWF4-3|ZRANB3', 'ENSG00000121988|ENST00000264159|ZRANB3', 'nc|ENSG00000121988|Q5FWF4-4|ZRANB3', 'nc|ENSG00000121988|Q5FWF4-2|ZRANB3'] 97826 12307 SHIGDAVVI True PC9_epitope_Rep4 909.49198125577 909.4914349679301 55.151 1 0.029112881498369707 0.006820099906480235 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 35878 21476 GVAETLVLV True PC9_epitope_Rep1 899.5327834385898 899.5322349679301 87.449 1 0.029077925573939845 0.006835737234260715 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 84678 12200 QHFDSVM[Oxidation]QL True PC9_epitope_Rep1 1119.5018946969099 1119.5007899358602 51.786 2 0.029069215094606762 0.006835737234260715 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 35806 20334 GTYDIFYTA True PC9_epitope_Rep4 1049.47057710485 1049.46948993586 86.359 2 0.02905171642800987 0.006835737234260715 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 2530 8446 [Acetylation]-AEQVALSR True H1975_Epitope_Rep3 914.4821451643598 914.48159496793 37.471 1 0.02904845665298234 0.006835737234260715 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD'] 97984 6987 SHSELIHNL True PC9_epitope_Rep6 1048.5301576696402 1048.5290699358602 35.85 2 0.02904371868733646 0.006835737234260715 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 107071 11271 SYLTSASSL True NCI_RA007_Epitope_Rep3 927.45492704071 927.45382993586 51.449 2 0.02903124404952251 0.006835737234260715 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 2646 13150 AESVLAVVA True NCI_RA007_Epitope_Rep4 857.4858332461699 857.48528496793 57.68 1 0.029027816304579013 0.006835737234260715 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 88601 12105 RALNQEQVIAV True PC9_epitope_Rep4 1239.6935345966301 1239.6924299358602 54.365 2 0.02901230094370819 0.006835737234260715 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 99194 22954 SLASLLVSV True PC9_epitope_Rep5 887.5327834385901 887.5322349679301 93.28 1 0.028996346785266323 0.006835737234260715 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 34563 18460 GQFGVGFYSA True PC9_epitope_Rep6 1031.4712458111896 1031.4706749679299 83.647 1 0.02897365997179547 0.006835737234260715 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 24314 18597 FADGFVLVY True H1975_Epitope_Rep3 1029.51713337445 1029.51657496793 77.993 1 0.028935602649355904 0.006835737234260715 0.9438714419765777 ['ENSG00000197885|ENST00000425478|NKIRAS1'] 4681 13438 ALDFIASK True PC9_epitope_Rep1 863.47526856247 863.47416993586 56.549 2 0.02892915238275662 0.006835737234260715 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 1411 8337 AEEGFTQVT True H1975_Epitope_Rep2 980.4450906329998 980.44398993586 37.02 2 0.028926139291388476 0.006835737234260715 0.9438714419765777 ['ENSG00000115946|ENST00000263657|PNO1'] 47260 20591 IYEPNFIFF True NCI_RA007_Epitope_Rep3 1188.5855472874398 1188.5844499358602 89.689 2 0.02892197058920003 0.006835737234260715 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 104203 5661 SSDKGRLCYY True H1975_Epitope_Rep2 1190.53900810118 1190.53735490379 26.773 3 0.028920939488877057 0.006835737234260715 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 6860 13782 AQIEVVPSA True PC9_epitope_Rep4 912.4916469025999 912.49109496793 60.909 1 0.028911376667924614 0.006835737234260715 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12', 'ENST00000495231.1_1_14:35209757-35209856:-|nuORF'] 45423 5420 ISDSEGFK True PC9_epitope_Rep5 881.4130622287299 881.41196993586 25.86 2 0.028893366123496387 0.006835737234260715 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 116953 17047 TYPIKTPTF True PC9_epitope_Rep3 1066.5698972233001 1066.5688099358601 70.725 2 0.02889182830090995 0.006835737234260715 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 54074 13082 KYLYVDKNF True PC9_epitope_Rep1 1188.6179100448796 1188.6168099358601 55.187 2 0.0288827049852358 0.006835737234260715 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 118645 9022 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48472993586 39.656 2 0.028854963117908066 0.006835737234260715 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 72506 13974 MVAPVTGNDV True PC9_epitope_Rep3 1001.48518162317 1001.48408993586 58.824 2 0.028839544502573755 0.006835737234260715 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 44876 6178 IQDADRVI True NCI_RA007_Epitope_Rep2 928.4977949122 928.49668993586 28.638 2 0.02883620796293866 0.006835737234260715 0.9438714419765777 ['ENSG00000167880|ENST00000301607|EVPL', 'EVPL|p.L696Efs*65|1|0.15|ENSG00000167880|chr17:76015052-76015053|GC/-|frameshift_variant'] 106203 17206 SVPLKVPGL True PC9_epitope_Rep4 908.5695033004798 908.56840993586 74.188 2 0.028831251260713266 0.006835737234260715 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 115712 11273 TVLERVEGA True PC9_epitope_Rep3 972.5240096600398 972.52290993586 48.37 2 0.028826632105471678 0.006835737234260715 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 113044 12980 TPVETVNIS True PC9_epitope_Rep4 958.49712620586 958.4965749679301 57.822 1 0.028826629210636685 0.006835737234260715 0.9438714419765777 ['ENSG00000169676|ENST00000304374|DRD5'] 17624 9643 EHNIFHNEV True PC9_epitope_Rep3 1137.5203212619301 1137.51868490379 42.04 3 0.028817242166580482 0.006835737234260715 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 75536 22113 NQLDSLMGL True PC9_epitope_Rep5 989.48518162317 989.4846349679301 90.092 1 0.028816526180180775 0.006835737234260715 0.9438714419765777 ['ENSG00000135148|ENST00000412615|TRAFD1'] 96677 7128 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.4183249679301 32.35 1 0.028802776491891245 0.006835737234260715 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 88882 5051 REAHPPISV True H1975_Epitope_Rep3 1004.5403284305199 1004.53922993586 24.551 2 0.02879384569299413 0.006835737234260715 0.9438714419765777 ['ENST00000466317.1_1_17:17124695-17126113:-|nuORF', 'nc|ENSG00000154803|Q8NFG4-2|FLCN'] 34987 10529 GRADGYVL True PC9_epitope_Rep5 849.43446637965 849.43336993586 45.487 2 0.02875860324469722 0.006835737234260715 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 70880 7982 MEGPVRIAA True H1975_Epitope_Rep3 942.4956867372199 942.49458993586 35.673 2 0.028751087368661478 0.006835737234260715 0.9438714419765777 ['ENST00000527967.5_1_11:125932492-125932705:-|nuORF'] 117011 15822 TYQDIQNTI True PC9_epitope_Rep2 1094.52440358286 1094.52387496793 66.118 1 0.028739851576708334 0.006835737234260715 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 79857 19968 PIIGSLFL True H1975_Epitope_Rep1 858.5214904789 858.5209449679301 83.111 1 0.028734465917406984 0.006835737234260715 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'ENSG00000108784|ENST00000225927|NAGLU'] 13841 12296 DRAGSIVL True PC9_epitope_Rep1 829.46576650793 829.46466993586 52.152 2 0.02869598297134005 0.006835737234260715 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 7072 13067 AQVVQVVL True NCI_RA007_Epitope_Rep4 854.5225531080598 854.52144993586 57.361 2 0.028686100424592346 0.006835737234260715 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4'] 113719 11734 TRDETNYGIP True PC9_epitope_Rep5 1164.5411162761598 1164.54000993586 50.136 2 0.028659850281703952 0.006835737234260715 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 53759 10885 KYFDEHYEY True PC9_epitope_Rep4 1292.53496826656 1292.5338699358601 49.634 2 0.0286567055951797 0.006835737234260715 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 137665 17190 YLYVDKNFI True PC9_epitope_Rep6 1173.6070110080097 1173.6059099358602 78.71 2 0.028655999026484892 0.006835737234260715 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 43532 12987 IIDNSQGF True PC9_epitope_Rep2 892.4290466460399 892.4279499358599 55.242 2 0.02865050255890657 0.006835737234260715 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 32067 5616 GEVTNVTTA True NCI_RA007_Epitope_Rep4 890.4345259493 890.43397496793 28.203 1 0.028650458883576074 0.006835737234260715 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 74024 9435 NHSDLDAEL True PC9_epitope_Rep4 1012.44615326216 1012.44504993586 43.904 2 0.02864159807902279 0.006835737234260715 0.9438714419765777 ['ENSG00000184292|ENST00000371225|TACSTD2'] 26822 10571 FLEGVGIR True NCI_RA007_Epitope_Rep1 889.5021520166499 889.50104993586 45.102 2 0.028632702519537596 0.006835737234260715 0.9438714419765777 ['ENSG00000101331|ENST00000452892|CCM2L'] 102374 12621 SPVPIAPTA True PC9_epitope_Rep4 851.47526856247 851.47416993586 56.386 2 0.028623874389568253 0.006835737234260715 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 72497 14659 MVAPAVASV True PC9_epitope_Rep4 843.4524249429099 843.45132993586 64.319 2 0.02861940848758885 0.006835737234260715 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 102730 21255 SQDYPTLAF True PC9_epitope_Rep1 1040.48147614172 1040.48097496793 86.58 1 0.028559410269567567 0.006835737234260715 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 108542 14374 TEGEPPFLP True H1975_Epitope_Rep2 985.4756624852898 985.47511496793 60.439 1 0.02852106609253451 0.006835737234260715 0.9438714419765777 ['ENSG00000241058|ENST00000377304|NSUN6'] 37233 9865 GVVDPVHGV True PC9_epitope_Rep4 877.46576650793 877.46466993586 45.597 2 0.028495910740197267 0.006855867346938775 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 132726 19759 VYSGGVYLF True PC9_epitope_Rep6 1003.5014833103099 1003.50097496793 88.662 1 0.028493897166398146 0.006855867346938775 0.9438714419765777 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 131122 14777 VVPAALKVV True PC9_epitope_Rep5 894.59023874506 894.58914993586 61.839 2 0.028492774118076363 0.006855867346938775 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 571 11340 AARLPLDAA True PC9_epitope_Rep1 896.5079656730799 896.50686993586 48.498 2 0.02848400630537361 0.006855867346938775 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 31704 10213 GEILKKIIP True NCI_RA007_Epitope_Rep4 1009.6535672776099 1009.65246993586 46.14 2 0.028459518593419796 0.006855867346938775 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 84916 11718 QHSVPLQL True PC9_epitope_Rep4 920.50796567308 920.50686993586 52.834 2 0.028450261075354998 0.006855867346938775 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 1735 12515 AEGSEFWSA True H1975_Epitope_Rep3 982.4032258210199 982.40267496793 53.335 1 0.028449093025632324 0.006855867346938775 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 63884 21329 LPVLIPVAS True PC9_epitope_Rep2 907.5742543277499 907.57314993586 87.506 2 0.028447213289210366 0.006855867346938775 0.9438714419765777 ['ENST00000257787.5_1_6:88385034-88385271:-|nuORF'] 57232 5450 LEFEHQRAP True NCI_RA007_Epitope_Rep3 1125.55670677065 1125.5550749037902 28.449 3 0.028443778825504865 0.006855867346938775 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 114452 9428 TSEIALLQSR True H1975_Epitope_Rep1 1116.6138872935999 1116.61278993586 41.177 2 0.028435470920189578 0.006855867346938775 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 46785 12435 IVDEAIYY True H1975_Epitope_Rep3 984.4804135125601 984.4798649679301 53.021 1 0.028426434145900258 0.006855867346938775 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 38726 9250 HHSTPLIV True PC9_epitope_Rep3 902.4974009893799 902.49630993586 40.522 2 0.028386333861686246 0.006855867346938775 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 88077 14303 QVVGKLIEV True PC9_epitope_Rep4 983.6015317047498 983.60042993586 62.917 2 0.0283651209538949 0.006855867346938775 0.9438714419765777 ['nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 2290 6833 AEPSRGPPLP True H1975_Epitope_Rep2 1019.5399940773498 1019.53888993586 31.202 2 0.02835274268911138 0.006855867346938775 0.9438714419765777 ['ENSG00000172301|ENST00000302362|COPRS'] 43832 21130 IKYPENFFLL True PC9_epitope_Rep4 1282.6961603655798 1282.6950699358601 89.439 2 0.028338229064238725 0.006855867346938775 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB'] 140165 11146 YVTEKVLAA True PC9_epitope_Rep5 992.5542471591598 992.55314993586 47.857 2 0.02832023554502089 0.006855867346938775 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENSG00000136872|ENST00000647789|ALDOB'] 126784 16606 VPSPGLPVSA True PC9_epitope_Rep3 922.5123823471799 922.51128993586 69.012 2 0.028318041447825845 0.006855867346938775 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 77484 21344 NYPPQYLILKL True PC9_epitope_Rep5 1360.77547331544 1360.77436993586 87.158 2 0.028298946945529486 0.00687754776707431 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 41043 19121 HYILHNSFF True PC9_epitope_Rep3 1176.5716285587998 1176.56998490379 78.771 3 0.02825952933828025 0.00687754776707431 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 59113 15628 LGEHNIDVLEG True PC9_epitope_Rep3 1194.5880664685799 1194.58696993586 65.26 2 0.02825024793079172 0.00687754776707431 0.9438714419765777 ['CON__P00761'] 78198 8181 PAPPPPPPP True PC9_epitope_Rep4 865.46978925921 865.46868993586 38.928 2 0.02824517223615442 0.00687754776707431 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 77498 11814 NYPSAFHSV True PC9_epitope_Rep5 1020.46649478392 1020.46538993586 50.438 2 0.0282224559499269 0.00687754776707431 0.9438714419765777 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 29267 17228 FVDGSAIQV True PC9_epitope_Rep4 934.47599683846 934.47488993586 74.275 2 0.02820078562890188 0.00687754776707431 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 7602 7670 ASIHEAWTDGK True PC9_epitope_Rep3 1213.57275075761 1213.57111490379 34.5 3 0.028189607263526987 0.00687754776707431 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 114123 12555 TRSAIILHL True PC9_epitope_Rep4 1022.62366413166 1022.62256993586 56.115 2 0.028175637211332136 0.006897807726455255 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1', 'ENST00000518921.1_1_8:63055996-63056374:-|nuORF'] 49330 7795 KIDEHHFVAV True PC9_epitope_Rep4 1193.6193070272102 1193.61766490379 37.383 3 0.028136999094802537 0.006897807726455255 0.9438714419765777 ['ENSG00000149313|ENST00000278618|AASDHPPT'] 105897 23608 SVLDGLLYV True PC9_epitope_Rep1 977.54334812229 977.54224993586 95.599 2 0.028131830844324884 0.006897807726455255 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 5626 21633 APAELLAALPA True PC9_epitope_Rep1 1035.5964463243097 1035.5953499358602 88.037 2 0.028122096679245555 0.006897807726455255 0.9438714419765777 ['ENSG00000182534|ENST00000449428|MXRA7', 'nc|ENSG00000182534|P84157-3|MXRA7', 'nc|ENSG00000182534|P84157|MXRA7'] 23008 16430 EVISKLYAV True PC9_epitope_Rep5 1020.5855472874398 1020.58444993586 68.197 2 0.02810425661429952 0.006897807726455255 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 11833 16077 DHMRFISEL True PC9_epitope_Rep4 1146.54917886206 1146.54754490379 69.774 3 0.028083430657018602 0.006897807726455255 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 139787 20703 YVDDFGVSV True PC9_epitope_Rep1 999.4549270407099 999.45382993586 84.46 2 0.028079313159525113 0.006897807726455255 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 14916 16141 DYKNTFPKW True PC9_epitope_Rep5 1197.5818588893299 1197.5807699358602 67.074 2 0.02806393588181375 0.006897807726455255 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1'] 6228 4904 APRGPGTVPA True PC9_epitope_Rep1 921.5032146458099 921.50210993586 23.728 2 0.028054867194210735 0.006897807726455255 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 32698 14463 GHSEVLPAAL True PC9_epitope_Rep1 992.5290950404799 992.52798993586 60.455 2 0.02804887225871281 0.006897807726455255 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 5364 13220 ALTGHLEEVVL True NCI_RA007_Epitope_Rep2 1179.6499384491499 1179.6488499358602 56.055 2 0.028015249626225043 0.006897807726455255 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 63808 13637 LPSRFIESA True PC9_epitope_Rep3 1018.5447451046199 1018.54364993586 57.52 2 0.028002677093345082 0.006897807726455255 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 70202 21407 LYLPSFFTY True NCI_RA007_Epitope_Rep2 1149.57464825057 1149.57354993586 88.586 2 0.028000620783023487 0.006897807726455255 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 11665 9928 DHDIPQQL True PC9_epitope_Rep6 964.46140940348 964.46030993586 48.706 2 0.02799385152871994 0.006897807726455255 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 8466 19238 ATSVTFVGV True PC9_epitope_Rep5 879.4701831820299 879.46908993586 79.038 2 0.027980956036831588 0.006897807726455255 0.9438714419765777 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF'] 104678 6915 STAGLIIGK True NCI_RA007_Epitope_Rep3 858.51746772762 858.51636993586 34.303 2 0.02797735453037906 0.006897807726455255 0.9438714419765777 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'NOVA1|p.G190R|1|0.35|ENSG00000139910|chr14:26448915-26448915|C/T|missense_variant', 'ENSG00000104967|ENST00000263257|NOVA2'] 64100 13966 LQEDPPVGV True PC9_epitope_Rep2 952.4865615221598 952.48546993586 58.994 2 0.027935535593045777 0.0069360744092966135 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 67026 20316 LTAPALALA True PC9_epitope_Rep3 839.5116540711899 839.51054993586 83.393 2 0.027924831653327646 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 136346 8829 YHDDDNSVL True PC9_epitope_Rep1 1076.44106788172 1076.43996993586 38.802 2 0.027922504374650527 0.0069360744092966135 0.9438714419765777 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 109554 6108 THAPATLEA True PC9_epitope_Rep5 909.45559574705 909.45448993586 28.481 2 0.027913573030803017 0.0069360744092966135 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 102120 7427 SPQQPGLSA True PC9_epitope_Rep2 883.4399456829099 883.4393949679301 33.944 1 0.027906924530281447 0.0069360744092966135 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 23007 16339 EVISKLYAV True PC9_epitope_Rep5 1020.5855472874398 1020.58444993586 67.845 2 0.027877833392751388 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 70075 19082 LYIGHLTTL True PC9_epitope_Rep2 1029.58588164061 1029.58478993586 78.763 2 0.027876957699535795 0.0069360744092966135 0.9438714419765777 ['ERC1|p.C1034Y|1|0.36|ENSG00000082805|chr12:1444638-1444638|G/A|missense_variant', 'ENST00000542302.6_1_12:1519571-1599393:+|nuORF', 'WNK1-ERC1|5|fusion', 'nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'WNK1-ERC1|2|fusion', 'WNK1-ERC1|1|fusion', 'WNK1-ERC1|4|fusion', 'WNK1-ERC1|3|fusion'] 84811 13259 QHLAQLQQL True PC9_epitope_Rep1 1077.59309227937 1077.59198993586 55.867 2 0.027874426054836945 0.0069360744092966135 0.9438714419765777 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant', 'YLPM1|p.P426Hfs*9|1|0.19|ENSG00000119596|chr14:74780567-74780567|C/-|frameshift_variant', 'YLPM1|p.G95Afs*124|1|0.21|ENSG00000119596|chr14:74763768-74763768|G/-|frameshift_variant'] 89673 4295 REVGSLGTSA True NCI_RA007_Epitope_Rep3 975.4985231881899 975.4974299358599 23.627 2 0.02784785519852205 0.0069360744092966135 0.9438714419765777 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.R1708Afs*23|1|0.17|ENSG00000185010|chrX:154928668-154928668|G/-|frameshift_variant', 'F8|p.E1756Nfs*16|1|0.1|ENSG00000185010|chrX:154906527-154906527|C/-|frameshift_variant'] 131332 12333 VVRNEQVEI True PC9_epitope_Rep4 1084.58767254576 1084.58656993586 55.248 2 0.027844373578197235 0.0069360744092966135 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 2777 7777 AEVDAAMAA True NCI_RA007_Epitope_Rep2 847.3745685450299 847.3740149679301 34.879 1 0.02784173086245709 0.0069360744092966135 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 70944 4400 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 22.034 2 0.02783809777146074 0.0069360744092966135 0.9438714419765777 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 39771 8665 HQAVAVIL True NCI_RA007_Epitope_Rep3 849.50723739709 849.50614993586 41.164 2 0.027828098109203985 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12', 'nc|ENSG00000196628|P15884-16|TCF4', 'ENSG00000196628|ENST00000354452|TCF4', 'nc|ENSG00000196628|P15884-5|TCF4', 'nc|ENSG00000196628|P15884|TCF4', 'nc|ENSG00000196628|P15884-4|TCF4', 'nc|ENSG00000196628|P15884-12|TCF4', 'nc|ENSG00000196628|P15884-13|TCF4', 'nc|ENSG00000196628|P15884-14|TCF4', 'nc|ENSG00000196628|P15884-10|TCF4', 'nc|ENSG00000196628|P15884-11|TCF4', 'nc|ENSG00000196628|P15884-7|TCF4', 'nc|ENSG00000196628|P15884-15|TCF4', 'nc|ENSG00000196628|P15884-9|TCF4', 'nc|ENSG00000196628|P15884-2|TCF4', 'nc|ENSG00000196628|P15884-6|TCF4', 'nc|ENSG00000196628|P15884-8|TCF4'] 98081 3653 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 20.173 2 0.027821491546181285 0.0069360744092966135 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 88191 16561 QYAGKYVLF True PC9_epitope_Rep6 1087.57023157647 1087.56912993586 76.14 2 0.02780735511848192 0.0069360744092966135 0.9438714419765777 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 125052 15092 VLPGHFNTF True PC9_epitope_Rep4 1030.5236157372199 1030.5225099358602 65.984 2 0.02779165573742837 0.0069360744092966135 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 117852 9137 VAPEEHPVLLT True NCI_RA007_Epitope_Rep4 1203.6499384491499 1203.6488499358602 41.985 2 0.027768412160740382 0.0069360744092966135 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 134950 13883 YAFGGGCEL True H1975_Epitope_Rep2 915.3796539254699 915.3791049679301 58.544 1 0.027758487301813507 0.0069360744092966135 0.9438714419765777 ['ENSG00000127884|ENST00000368547|ECHS1'] 25298 9213 FEEGLETTA True H1975_Epitope_Rep2 995.4447562798299 995.4442049679301 40.392 1 0.02775718166544699 0.0069360744092966135 0.9438714419765777 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 94816 13425 RYLTVAAVF True NCI_RA007_Epitope_Rep5 1038.5862159937797 1038.5851099358601 58.325 2 0.02773740496115504 0.0069360744092966135 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 1954 6115 AEIPETSNA True H1975_Epitope_Rep2 930.4294405688601 930.42834993586 28.5 2 0.027731847748711118 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B'] 135202 21993 YAVELFEGL True PC9_epitope_Rep4 1039.5226126777097 1039.5215099358602 92.816 2 0.027725520154759313 0.0069360744092966135 0.9438714419765777 ['BCAT1|p.R291Gfs*26|1|0.36|ENSG00000060982|chr12:24836543-24836543|T/-|frameshift_variant', 'ENST00000544418.1_1_12:24987681-25055019:-|nuORF', 'nc|ENSG00000060982|P54687-4|BCAT1', 'ENSG00000060982|ENST00000261192|BCAT1', 'nc|ENSG00000060982|P54687-5|BCAT1'] 14443 8906 DTNADKQLSF True NCI_RA007_Epitope_Rep5 1137.53021723929 1137.52912993586 40.918 2 0.02772078436666863 0.0069360744092966135 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 24691 19611 FAVALPQLL True H1975_Epitope_Rep1 970.5851533646198 970.5846049679301 81.643 1 0.027709354450237006 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant'] 44216 8192 ILSGVVTK True PC9_epitope_Rep5 815.51165407119 815.51054993586 36.452 2 0.027706239074767096 0.0069360744092966135 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 92084 8885 RPSSQYIVA True PC9_epitope_Rep5 1019.53999407735 1019.53888993586 39.119 2 0.027681555976315834 0.0069360744092966135 0.9438714419765777 ['ENSG00000103257|ENST00000261622|SLC7A5', 'ENST00000437413.2_1_16:21498935-21531497:-|nuORF', 'nc|ENSG00000260727|Q8MH63|SLC7A5P1', 'nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2', 'nc|ENSG00000258186|Q9GIP4|SLC7A5P2', 'ENST00000522841.6_1_16:21495824-21531728:-|nuORF'] 101508 11621 SPAAPVITA True PC9_epitope_Rep4 825.45961849833 825.45852993586 52.459 2 0.02766382613771713 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 91579 6335 RPAPVAVAA True PC9_epitope_Rep5 850.5024863698198 850.50138993586 29.342 2 0.027650725532918034 0.0069360744092966135 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 115065 18194 TTSDIDYAL True PC9_epitope_Rep5 997.46040634397 997.45985496793 74.993 1 0.02764746916611838 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 59431 15116 LGLTNQPEL True PC9_epitope_Rep1 983.52876068731 983.52766993586 62.962 2 0.027638938740698837 0.0069360744092966135 0.9438714419765777 ['ENSG00000179626|ENST00000641569|OR6C4'] 113111 6013 TQAPAVATT True PC9_epitope_Rep3 858.44469671018 858.44358993586 28.182 2 0.027632167047350553 0.0069360744092966135 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000529806.5_1_16:2012098-2012518:-|nuORF', 'ENST00000475555.1_1_4:144270430-144270667:-|nuORF'] 84739 11764 QHGGFVVTV True PC9_epitope_Rep6 942.4923156089399 942.49120993586 56.412 2 0.027625936899119227 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000470356.3_1_19:3572947-3573972:+|nuORF', 'ENST00000488973.6_1_19:3572986-3573972:+|nuORF'] 18019 14916 EIIDLVLDR True H1975_Epitope_Rep3 1084.61282466444 1084.61172993586 62.76 2 0.02762172141399246 0.0069360744092966135 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 27365 20769 FMPPGLQEL True PC9_epitope_Rep4 1030.5157534754599 1030.51464993586 88.043 2 0.027616212509427356 0.0069360744092966135 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 37232 10409 GVVDPVHGV True PC9_epitope_Rep2 877.46576650793 877.46466993586 45.36 2 0.027599860823688826 0.0069360744092966135 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 136712 22287 YIITEIPSL True PC9_epitope_Rep5 1047.58521293427 1047.5841099358602 90.734 2 0.027586100577144248 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000155085|Q5TCS8-2|AK9', 'nc|ENSG00000155085|Q5TCS8-1|AK9', 'nc|ENSG00000155085|Q5TCS8-3|AK9', 'nc|ENSG00000155085|Q5TCS8-6|AK9', 'ENSG00000155085|ENST00000424296|AK9'] 6812 16623 AQGGVLPNI True PC9_epitope_Rep6 867.48141657207 867.48030993586 76.405 2 0.027571835603741046 0.0069360744092966135 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC8|p.A114T|1|0.22|ENSG00000277075|chr6:26217314-26217314|G/A|missense_variant', 'H2AC4|p.Q113K|1|0.39|ENSG00000278463|chr6:26033232-26033232|G/T|missense_variant', 'ENST00000454426.1_1_6:25882256-25882391:-|nuORF', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 86256 8486 QPYYATRVN True PC9_epitope_Rep1 1110.5458077337798 1110.54470993586 37.477 2 0.02754723292615791 0.0069360744092966135 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 129851 11360 VTLKAEQTI True PC9_epitope_Rep4 1001.5757108797299 1001.5746099358599 51.47 2 0.02751913867210098 0.0069360744092966135 0.9438714419765777 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.V2037Lfs*29|1|0.2|ENSG00000196569|chr6:129440839-129440839|G/-|frameshift_variant'] 75333 9285 NPYYGGESA True PC9_epitope_Rep3 956.3875757568799 956.38646993586 40.656 2 0.02749565468791519 0.0069360744092966135 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 98824 14106 SITSELHAV True PC9_epitope_Rep3 955.4974605590301 955.49636993586 59.344 2 0.027489431904755727 0.0069360744092966135 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 117435 15503 VADPYVVIM True NCI_RA007_Epitope_Rep4 1005.5205045027299 1005.51997496793 67.33 1 0.027488067997940024 0.0069360744092966135 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 77297 14296 NYKDLNGNVF True PC9_epitope_Rep2 1182.5669371011797 1182.5658499358601 60.255 2 0.027485167182972593 0.0069360744092966135 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 104028 9789 SRSPGLVL True PC9_epitope_Rep6 827.48650195251 827.48540993586 48.102 2 0.027460923625577737 0.0069360744092966135 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1', 'nc|ENSG00000156521|Q2T9J0-2|TYSND1'] 120311 15501 VFPEKGYSF True PC9_epitope_Rep2 1072.5229470308798 1072.52184993586 64.899 2 0.027454714535082216 0.0069360744092966135 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 129702 16969 VTITGIVKV True PC9_epitope_Rep2 928.59571804832 928.59462993586 70.518 2 0.027454625043333687 0.0069360744092966135 0.9438714419765777 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 17349 8554 EHDPVGQMV True PC9_epitope_Rep6 1010.44913046762 1010.44802993586 42.67 2 0.027450798653373354 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 29417 23971 FVFPGELLL True PC9_epitope_Rep2 1033.5848190114498 1033.58427496793 97.697 1 0.027446222022581238 0.006954387400286357 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 107508 10384 TAAPPAQPL True PC9_epitope_Rep5 864.4705175352 864.46942993586 44.926 2 0.02742001527397041 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 132049 7984 VYIDRVRSL True NCI_RA007_Epitope_Rep4 1119.64004247179 1119.6389499358602 37.47 2 0.027401254478224626 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 70765 11573 MEDLGGSLPA True H1975_Epitope_Rep2 988.4535471417199 988.4529949679301 49.579 1 0.027379198475450534 0.006954387400286357 0.9438714419765777 ['ENST00000540056.5_1_12:16500716-16500800:+|nuORF'] 133259 6808 WEEPSSGNGTA True H1975_Epitope_Rep2 1133.46253160229 1133.46142993586 31.105 2 0.027378782407692186 0.006954387400286357 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 40641 13059 HTGPVFTV True PC9_epitope_Rep3 856.44430278736 856.44320993586 55.258 2 0.02737045248319884 0.006954387400286357 0.9438714419765777 ['ENST00000547496.5_1_12:89853476-89885774:-|nuORF', 'ENST00000539190.6_1_12:89855074-89919672:-|nuORF', 'nc|ENSG00000139323|Q8TC44-2|POC1B', 'ENSG00000139323|ENST00000313546|POC1B'] 89303 6908 RELTPQVVSA True NCI_RA007_Epitope_Rep3 1098.6033226099 1098.6022299358601 34.277 2 0.02734456071036022 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 77487 13427 NYPQSVPRL True PC9_epitope_Rep1 1072.56654317836 1072.5654499358602 56.508 2 0.027320185987582266 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'ENST00000574308.1_1_17:1371595-1373510:-|nuORF'] 45367 6492 ISDLAQHY True H1975_Epitope_Rep3 945.4555957470502 945.45448993586 29.941 2 0.027313617417277763 0.006954387400286357 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 74273 5593 NIHLNLDRR True NCI_RA007_Epitope_Rep4 1149.6366884268498 1149.6350549037902 28.113 3 0.027305504249966753 0.006954387400286357 0.9438714419765777 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A'] 113869 17610 TRFAEVECL True PC9_epitope_Rep3 1066.5117307241799 1066.5106299358602 72.925 2 0.027303861225339055 0.006954387400286357 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 81427 7033 PQEEAPEV True H1975_Epitope_Rep2 897.4079768482899 897.40686993586 31.977 2 0.027300456159364925 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 86489 3580 QQYESVAAK True NCI_RA007_Epitope_Rep5 1022.5032742154598 1022.50216993586 19.699 2 0.0272834538803885 0.006954387400286357 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 70809 11008 MEENFAVEA True H1975_Epitope_Rep2 1038.4328116971399 1038.43170993586 47.37 2 0.0272833718496736 0.006954387400286357 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 98640 9066 SIPGGPVRL True H1975_Epitope_Rep1 894.52870111766 894.52760993586 39.781 2 0.02727815822110352 0.006954387400286357 0.9438714419765777 ['CON__P12763'] 90740 8847 RKQMVIDVL True NCI_RA007_Epitope_Rep3 1100.6375999436398 1100.6365099358602 41.891 2 0.027273960435663745 0.006954387400286357 0.9438714419765777 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 86657 13251 QRGPPIIL True PC9_epitope_Rep4 892.5494365622399 892.54832993586 58.868 2 0.027268950603024547 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 70379 15207 LYQEIIHYF True NCI_RA007_Epitope_Rep4 1224.61791004488 1224.6168099358601 66.108 2 0.02726284638299339 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 39693 7931 HPTWALKEA True PC9_epitope_Rep2 1051.5450794577898 1051.54398993586 35.871 2 0.027256127006271395 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 2706 5203 AETKPPMAP True H1975_Epitope_Rep2 940.4688032830398 940.46770993586 25.085 2 0.027254967510208204 0.006954387400286357 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 105395 10353 SVADTVARV True PC9_epitope_Rep5 916.4977949121999 916.49668993586 44.807 2 0.027251485238366516 0.006954387400286357 0.9438714419765777 ['ENSG00000145632|ENST00000274289|PLK2'] 15235 8479 EAGDEFELR True H1975_Epitope_Rep1 1064.47745339044 1064.47634993586 37.544 2 0.02723910811194123 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000171552|Q07817-2|BCL2L1', 'nc|ENSG00000171552|Q07817-3|BCL2L1', 'ENSG00000171552|ENST00000307677|BCL2L1'] 34978 10628 GRADGYVL True PC9_epitope_Rep1 849.43446637965 849.43336993586 45.773 2 0.027238800894847114 0.006954387400286357 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 34430 6848 GPYGGAQPSA True PC9_epitope_Rep3 903.40864555463 903.40754993586 31.355 2 0.02723796522278075 0.006954387400286357 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 30230 21175 GAAAFFTAV True PC9_epitope_Rep5 853.4334037504899 853.4328549679301 86.499 1 0.02723576756513394 0.006954387400286357 0.9438714419765777 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 77334 11613 NYKKFYEQF True PC9_epitope_Rep6 1265.6080736371698 1265.6069699358602 55.793 2 0.027233351259185967 0.006954387400286357 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 2653 6367 AETAAVTVA True H1975_Epitope_Rep2 831.43379767331 831.43324496793 29.419 1 0.027206130076120518 0.006954387400286357 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 130597 10795 VVADETPAV True PC9_epitope_Rep2 899.4600124211499 899.45890993586 46.841 2 0.02715799050675125 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 125986 9990 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.4914349679301 43.756 1 0.027153299330470292 0.006969353007945517 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 75750 12426 NRAEYYHLL True PC9_epitope_Rep2 1177.58800689893 1177.5869099358601 53.104 2 0.0270987974604072 0.006969353007945517 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 47497 17093 IYLDLPQNF True NCI_RA007_Epitope_Rep3 1121.57571087973 1121.57460993586 75.104 2 0.027071036915153893 0.006969353007945517 0.9438714419765777 ['ENSG00000013561|ENST00000394520|RNF14', 'ENST00000502341.5_1_5:141348723-141357950:+|nuORF'] 86355 20697 QQLEGAFAL True PC9_epitope_Rep5 975.5025459394698 975.50199496793 84.667 1 0.027069223545954636 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'ENSG00000131459|ENST00000253778|GFPT2'] 123836 16789 VIVPLYDTL True NCI_RA007_Epitope_Rep3 1031.5902983147098 1031.58920993586 73.889 2 0.027064446654811572 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 51852 8775 KKLPPLPSL True NCI_RA007_Epitope_Rep3 991.64300259391 991.64190993586 41.604 2 0.02705930504119207 0.006969353007945517 0.9438714419765777 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 109932 13078 THSDAFRVSL True PC9_epitope_Rep1 1131.56727145435 1131.56563490379 55.172 3 0.02705582981579476 0.006969353007945517 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 62784 13654 LMDHTIPEV True PC9_epitope_Rep6 1053.51648175145 1053.5153899358602 64.3 2 0.027021687730246977 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP'] 1203 8751 AEDEAAALP True H1975_Epitope_Rep3 885.4079768482899 885.4074249679301 38.665 1 0.027021014009222 0.006969353007945517 0.9438714419765777 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 47094 9848 IVVNLTGR True PC9_epitope_Rep6 870.5287011176599 870.52760993586 48.356 2 0.026994716815097297 0.006969353007945517 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 36053 17177 GVDVTLPRV True PC9_epitope_Rep1 954.5498304850599 954.54872993586 70.892 2 0.02698680446681912 0.006969353007945517 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 118228 18308 VAYLDPLEL True NCI_RA007_Epitope_Rep4 1031.5539128059897 1031.55337496793 79.201 1 0.026979537574385634 0.006969353007945517 0.9438714419765777 ['ENSG00000187244|ENST00000270233|BCAM'] 113930 6828 TRISGQVV True PC9_epitope_Rep5 858.4923156089399 858.49120993586 31.236 2 0.026977656873181433 0.006969353007945517 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 71853 6675 MPFQGSGKSA True PC9_epitope_Rep5 1008.4698659121999 1008.46876993586 30.647 2 0.026972646052853856 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 87832 20035 QVIQSLIAL True PC9_epitope_Rep6 983.6015317047498 983.60042993586 89.732 2 0.026952311998424797 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000185651|P68036-3|UBE2L3', 'nc|ENSG00000185651|P68036-2|UBE2L3', 'UBE2L3|p.Q116Sfs*10|1|0.33|ENSG00000185651|chr22:21621546-21621546|C/-|frameshift_variant', 'ENSG00000236444|ENST00000635918|UBE2L5', 'ENSG00000185651|ENST00000342192|UBE2L3', 'ENST00000496722.1_1_22:21922618-21975955:+|nuORF'] 25341 13497 FEFNDGAIA True H1975_Epitope_Rep2 982.4396113297397 982.43850993586 57.049 2 0.026947808273626774 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 139235 13206 YTAEGEINNV True PC9_epitope_Rep1 1108.50366813828 1108.50256993586 55.66 2 0.026935957820915585 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000136485|P61962-2|DCAF7', 'ENSG00000136485|ENST00000614556|DCAF7'] 33119 6582 GKMERQVFL True NCI_RA007_Epitope_Rep3 1106.5906497512199 1106.58954993586 32.941 2 0.026912912034694703 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 1374 5996 AEEEPSTSATV True H1975_Epitope_Rep2 1119.49316302423 1119.4925749679298 28.042 1 0.026906698784021927 0.006969353007945517 0.9438714419765777 ['ENSG00000100023|ENST00000398831|PPIL2', 'ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 19981 12888 EMEEKYYRF True PC9_epitope_Rep3 1293.5699738762899 1293.56833490379 54.591 3 0.026894478655350797 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 53997 7372 KYLEERAMRQF True NCI_RA007_Epitope_Rep4 1469.74491854649 1469.74327490379 34.997 3 0.026893106998529887 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 93987 14524 RVPKTLVLV True PC9_epitope_Rep3 1023.6804507317898 1023.6793499358599 60.989 2 0.02681981495179541 0.006969353007945517 0.9438714419765777 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 135016 11222 YAGSGNVL True PC9_epitope_Rep5 779.38136817763 779.3808149679301 48.155 1 0.026816316398543528 0.006969353007945517 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 90495 5871 RKAGIFQSV True NCI_RA007_Epitope_Rep3 1004.57671393924 1004.57560993586 30.072 2 0.026797327216753992 0.006969353007945517 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 5641 14144 APAGIPAVA True PC9_epitope_Rep3 765.43848913093 765.4379449679301 59.489 1 0.026768493065688834 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 59871 9191 LHGPSGSAF True PC9_epitope_Rep3 871.4188163155101 871.41770993586 40.291 2 0.026765758587443022 0.006969353007945517 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 6250 7047 APRLQSEVA True PC9_epitope_Rep3 969.5243440132099 969.52324993586 32.116 2 0.026764401614094473 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 21661 11662 ERTSFNYAM True PC9_epitope_Rep4 1117.4862442523297 1117.4851499358601 52.619 2 0.02675895662642353 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 88423 17634 QYSPLLAAF True NCI_RA007_Epitope_Rep4 1008.5280324113198 1008.52692993586 76.298 2 0.026748484427868674 0.006969353007945517 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 52290 10106 KPAEFTVDA True PC9_epitope_Rep1 976.4865615221598 976.48546993586 43.745 2 0.02672997423727006 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 134855 19138 YAADNQIYI True PC9_epitope_Rep1 1069.50802524273 1069.5069299358602 78.406 2 0.02672598827422891 0.006969353007945517 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 69167 14543 LVLVGDGG True PC9_epitope_Rep2 728.40685464948 728.40630496793 61.211 1 0.026711265599450376 0.006969353007945517 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 34847 9117 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42828993586 40.006 2 0.026708407480484732 0.006969353007945517 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 57428 7504 LEIKPPPSA True H1975_Epitope_Rep3 950.54368247546 950.54258993586 33.845 2 0.026703596652347915 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant', 'SRCAP|p.N716Ifs*24|1|0.21|ENSG00000080603|chr16:30713222-30713244|CAATGCCTTTCATGTGTGTATCA/-|frameshift_variant'] 126650 7731 VPQQALVIR True H1975_Epitope_Rep3 1022.6236641316598 1022.62256993586 34.72 2 0.026702940121536175 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant'] 90887 17201 RLAVLFSGA True PC9_epitope_Rep2 932.5443511817999 932.54324993586 71.422 2 0.02667911481288412 0.006969353007945517 0.9438714419765777 ['ENSG00000129226|ENST00000250092|CD68', 'ENST00000581621.1_1_17:7482995-7483061:+|nuORF', 'nc|ENSG00000129226|P34810-2|CD68', 'nc|ENSG00000129226|P34810-3|CD68'] 116672 22503 TYIQILESF True PC9_epitope_Rep4 1112.57537652656 1112.57426993586 94.788 2 0.026674786791861076 0.006969353007945517 0.9438714419765777 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM'] 44898 20424 IQDGYLSLL True PC9_epitope_Rep6 1020.54916177872 1020.54806993586 91.264 2 0.02667222415882007 0.006969353007945517 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 119903 14097 VEWDYKLVP True NCI_RA007_Epitope_Rep4 1147.5913609438699 1147.59026993586 61.505 2 0.026667573526245443 0.006969353007945517 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4'] 1209 6539 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.4074249679301 30.063 1 0.026655972257748704 0.006969353007945517 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 103752 14932 SRFGKYFEI True PC9_epitope_Rep6 1145.58694426977 1145.58529490379 69.434 3 0.026651604352167138 0.006969353007945517 0.9438714419765777 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'MYO1F|p.A217Pfs*12|1|0.18|ENSG00000142347|chr19:8551862-8551862|C/-|frameshift_variant', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 101576 13914 SPDSGVYEM True PC9_epitope_Rep5 983.3906125319901 983.38950993586 58.54 2 0.026649399683343473 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 98513 19131 SILGKFAVV True PC9_epitope_Rep4 932.5695033004798 932.56840993586 81.68 2 0.026646693486635942 0.006969353007945517 0.9438714419765777 ['DHRS1-METTL3|1|fusion', 'ENSG00000165819|ENST00000298717|METTL3', 'nc|ENSG00000165819|Q86U44-2|METTL3', 'ENST00000537163.5_1_14:21967572-21971372:-|nuORF'] 34554 20314 GQFGVGFYSA True PC9_epitope_Rep2 1031.4712458111896 1031.47014993586 83.561 2 0.026617736138483197 0.006969353007945517 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000575854.5_1_16:3724861-3727653:-|nuORF', 'ENST00000573872.5_1_16:3721765-3727644:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P', 'CREBBP-TRAP1|1|fusion', 'CREBBP-TRAP1|3|fusion', 'nc|ENSG00000126602|Q12931-2|TRAP1', 'CREBBP-TRAP1|2|fusion', 'ENSG00000126602|ENST00000246957|TRAP1'] 35488 5899 GTFGGLGSK True NCI_RA007_Epitope_Rep4 822.42356734278 822.42246993586 29.314 2 0.026616697572716373 0.006969353007945517 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 137093 17749 YLDAIPPTFY True H1975_Epitope_Rep2 1198.5910265907 1198.58992993586 73.592 2 0.026605171941118298 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000092969|P61812-2|TGFB2'] 77123 18787 NYASTFTWW True NCI_RA007_Epitope_Rep3 1174.5083595959 1174.5072699358602 82.162 2 0.026604111013041776 0.006969353007945517 0.9438714419765777 ['nc|ENSG00000052802|Q15800-2|MSMO1', 'ENSG00000052802|ENST00000261507|MSMO1'] 112161 21643 TLVGVFTITL True PC9_epitope_Rep2 1062.6324974798601 1062.6314099358601 88.724 2 0.026591630308126963 0.006969353007945517 0.9438714419765777 ['ENSG00000173175|ENST00000462833|ADCY5', 'nc|ENSG00000173175|O95622-2|ADCY5'] 108979 7977 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46963496793 35.655 1 0.0265759492988674 0.0069846021271288295 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 72498 14750 MVAPAVASV True PC9_epitope_Rep4 843.4524249429099 843.45132993586 64.669 2 0.026575232473447615 0.0069846021271288295 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 106443 16733 SVVADTPEL True PC9_epitope_Rep3 929.47057710485 929.46948993586 69.502 2 0.026566307029995524 0.0069846021271288295 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1'] 86739 15774 QRLDLQIKL True PC9_epitope_Rep4 1125.68699266421 1125.6853349037901 68.598 3 0.026564880793196757 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000140280|Q8IV50-2|LYSMD2', 'ENSG00000140280|ENST00000267838|LYSMD2'] 89804 6260 RFEEKHAYF True PC9_epitope_Rep6 1225.5880068989297 1225.58635490379 32.582 3 0.026557108709593963 0.0069846021271288295 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 74770 18821 NLLTHIENV True PC9_epitope_Rep1 1051.5662088251902 1051.5651099358602 77.182 2 0.026551589156538217 0.0069846021271288295 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000477051.1_1_8:133854703-133858165:+|nuORF'] 84288 10492 QEYPTLKVP True NCI_RA007_Epitope_Rep4 1073.57571087973 1073.57460993586 47.205 2 0.02654707371395156 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000503693.1_1_4:1283701-1322488:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-5|MAEA'] 28081 7490 FRDQNPEQL True PC9_epitope_Rep6 1145.5465360097699 1145.54542993586 38.059 2 0.026533919243879125 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 5920 13086 APHPPLSVV True PC9_epitope_Rep1 915.51780208079 915.51670993586 55.204 2 0.026531418838355008 0.0069846021271288295 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 90590 6571 RKIIATTL True NCI_RA007_Epitope_Rep4 914.59130137422 914.59020993586 31.893 2 0.026528350479336677 0.0069846021271288295 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5', 'nc|ENSG00000197442|Q99683-2|MAP3K5'] 34571 10215 GQFTGSTGV True PC9_epitope_Rep1 852.3977465177599 852.39664993586 44.172 2 0.026499693571262476 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 138361 11519 YRDETLSGSEL True PC9_epitope_Rep2 1268.5884603913998 1268.5873699358601 49.634 2 0.026474033870487357 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 2776 8091 AEVDAAMAA True NCI_RA007_Epitope_Rep1 847.3745685450299 847.3740149679301 35.469 1 0.026464723939989998 0.0069846021271288295 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 105387 13565 SVAAQLTGV True PC9_epitope_Rep6 844.4654321547599 844.46432993586 63.913 2 0.026459719959871415 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 107405 13378 SYTRLFSNF True NCI_RA007_Epitope_Rep4 1133.5505587610498 1133.54946993586 58.626 2 0.02643836331857774 0.0069846021271288295 0.9438714419765777 ['ENST00000490112.1_1_3:33438535-33441732:-|nuORF', 'ENST00000486388.5_1_3:33438291-33450199:-|nuORF', 'nc|ENSG00000153560|Q9NZI7-4|UBP1', 'ENSG00000153560|ENST00000283629|UBP1'] 91755 6393 RPKPIITSV True PC9_epitope_Rep4 1009.62841515893 1009.62730993586 31.681 2 0.026415162822246603 0.0069846021271288295 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 17089 10942 EGRDTHYLI True PC9_epitope_Rep5 1102.54072235334 1102.5396299358601 47.079 2 0.026406526997906434 0.0069846021271288295 0.9438714419765777 ['TENM1|p.F2575L|1|0.89|ENSG00000009694|chrX:124380991-124380991|A/G|missense_variant'] 2232 7533 AENVAVPEA True NCI_RA007_Epitope_Rep3 898.4396113297399 898.4390649679301 36.753 1 0.026392787203328664 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 32063 5553 GEVTNVTTA True H1975_Epitope_Rep2 890.4345259493 890.43397496793 26.367 1 0.026363735659805574 0.0069846021271288295 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 1548 12919 AEEVSLISC True H1975_Epitope_Rep2 949.4426481048499 949.4415499358599 54.807 2 0.026354593456918894 0.0069846021271288295 0.9438714419765777 ['ENST00000395949.2_1_11:31451062-31451945:+|nuORF', 'ENST00000530125.1_1_11:31438740-31451945:+|nuORF', 'ENSG00000170946|ENST00000465995|DNAJC24'] 136424 13393 YHFSSSEL True PC9_epitope_Rep5 968.4239612655999 968.42286993586 56.532 2 0.02634830661078117 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 113121 12206 TQAPGNPVL True PC9_epitope_Rep3 895.4763311916299 895.4752299358599 51.981 2 0.026339916277315863 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 75851 9605 NRDLATPVM True PC9_epitope_Rep6 1015.51206507735 1015.51096993586 47.265 2 0.026338727195923534 0.0069846021271288295 0.9438714419765777 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 89083 4573 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 22.711 3 0.026337461734177163 0.0069846021271288295 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 48441 2735 KEEEIARIA True H1975_Epitope_Rep2 1057.5767735088898 1057.57566993586 14.579 2 0.026332563066880792 0.0069846021271288295 0.9438714419765777 ['ENSG00000171703|ENST00000343484|TCEA2'] 71584 22877 MLFPGSIAL True PC9_epitope_Rep5 947.51502519947 947.51392993586 92.994 2 0.026328249499649677 0.0069846021271288295 0.9438714419765777 ['ENSG00000101367|ENST00000375571|MAPRE1'] 102683 3842 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 20.948 2 0.026296707673998988 0.0069846021271288295 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 41141 17907 HYPPVQVLF True PC9_epitope_Rep6 1098.58621599378 1098.5851099358601 81.503 2 0.02624510549433523 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 113136 15907 TQAPPNVVL True PC9_epitope_Rep2 937.5232813840499 937.52218993586 66.439 2 0.026244381430278182 0.0069846021271288295 0.9438714419765777 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 132527 12663 VYPGDPLRF True NCI_RA007_Epitope_Rep5 1062.5498304850598 1062.5487299358601 55.363 2 0.02624372491378278 0.0069846021271288295 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 126343 8444 VPKNSDPWAA True PC9_epitope_Rep4 1083.53490869691 1083.53380993586 39.944 2 0.026231688357636465 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 52733 17221 KQLEAIDQLHL True PC9_epitope_Rep5 1306.7245003717399 1306.72285490379 71.261 3 0.026221875861771042 0.0069846021271288295 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 111753 10960 TLQKEGVIGV True PC9_epitope_Rep2 1042.6022599807397 1042.60116993586 47.479 2 0.026218947248905007 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 75336 9187 NPYYGGESA True PC9_epitope_Rep5 956.3875757568799 956.38646993586 40.282 2 0.02621129415945889 0.0069846021271288295 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 91753 9089 RPKPIITSV True PC9_epitope_Rep3 1009.62841515893 1009.62730993586 39.901 2 0.02620259904646967 0.0069846021271288295 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 139205 15838 YSVETVTLL True H1975_Epitope_Rep2 1023.5488274255499 1023.54772993586 66.113 2 0.026201547419682426 0.0069846021271288295 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 13849 10244 DRAGSIVL True PC9_epitope_Rep6 829.46576650793 829.46466993586 50.066 2 0.026201023958551648 0.0069846021271288295 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 8473 3966 ATTLKNRPL True NCI_RA007_Epitope_Rep4 1012.60292868708 1012.60182993586 21.494 2 0.026184827575265617 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000169129|Q8N4X5-2|AFAP1L2', 'ENSG00000169129|ENST00000304129|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-4|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-3|AFAP1L2', 'ENST00000491814.1_1_10:116056685-116061337:-|nuORF'] 31761 5106 GELKTQMTSA True NCI_RA007_Epitope_Rep4 1064.51721002744 1064.5161099358602 26.15 2 0.026170005676453313 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 120449 19839 VFTYVGALF True NCI_RA007_Epitope_Rep2 1015.5378688190298 1015.5372749679301 82.157 1 0.026164961759501334 0.0069846021271288295 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 125460 7898 VLTVINQTQK True PC9_epitope_Rep4 1142.66592286646 1142.66482993586 37.808 2 0.026144028828727343 0.0069846021271288295 0.9438714419765777 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF'] 36062 15097 GVDVTLPRV True PC9_epitope_Rep6 954.5498304850599 954.54872993586 70.129 2 0.026110756436035235 0.0069846021271288295 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 113744 8665 TRDPAQRVVL True PC9_epitope_Rep1 1153.6567551650899 1153.65511490379 38.168 3 0.02609716147196756 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 31309 5733 GEAAGSPVP True H1975_Epitope_Rep2 783.37628279719 783.37573496793 27.05 1 0.02609065221206246 0.0069846021271288295 0.9438714419765777 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 113144 7527 TQAPQPAQV True PC9_epitope_Rep5 938.4821448480599 938.48104993586 33.902 2 0.026079104771148946 0.0069846021271288295 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 96976 8839 SEVGKLLSA True H1975_Epitope_Rep3 902.50729696674 902.50618993586 39.007 2 0.026069654020190215 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF'] 127989 6542 VRQAPGKGLEW True NCI_RA007_Epitope_Rep3 1239.6724052292298 1239.67075490379 32.778 3 0.026067784819478447 0.0069846021271288295 0.9438714419765777 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000211950|A0A0C4DH33|IGHV1-24', 'nc|ENSG00000211955|P0DP02|IGHV3-30-3', 'nc|ENSG00000270550|P0DP03|IGHV3-30-5', 'nc|ENSG00000211967|P01767|IGHV3-53', 'nc|ENSG00000211955|P01772|IGHV3-33', 'nc|ENSG00000211938|P01780|IGHV3-7'] 46986 19483 IVPEGGILQI True PC9_epitope_Rep6 1037.6120963884498 1037.61098993586 87.604 2 0.02606300086795187 0.007002674160358972 0.9438714419765777 ['ENSG00000163661|ENST00000295927|PTX3'] 71062 5533 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38966496793 26.29 1 0.026034391902524 0.007002674160358972 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 135510 13972 YEDSGIPLP True H1975_Epitope_Rep2 989.4705771048499 989.46948993586 58.89 2 0.026000345498925968 0.007002674160358972 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 137496 21191 YLPPGFLSA True PC9_epitope_Rep3 963.50656869075 963.5060249679301 86.799 1 0.02599593210323488 0.007002674160358972 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 105749 11766 SVIDGNLELVK True NCI_RA007_Epitope_Rep4 1185.6605031328502 1185.6594099358601 52.232 2 0.025992361729912483 0.007002674160358972 0.9438714419765777 ['ENSG00000198435|ENST00000356628|NRARP'] 31463 10172 GEEEPPALP True H1975_Epitope_Rep2 937.4392769765698 937.43816993586 44.129 2 0.025968034631853137 0.007002674160358972 0.9438714419765777 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD'] 376 15823 AALDIYETL True NCI_RA007_Epitope_Rep4 1007.51752729727 1007.5169749679301 68.721 1 0.025930247292637917 0.007002674160358972 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ITCH-DYNLRB1|4|fusion', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH'] 112296 13842 TMAKESSIIGV True PC9_epitope_Rep3 1134.59546034814 1134.5943699358602 58.325 2 0.025909098516970493 0.007002674160358972 0.9438714419765777 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 17482 9686 EHGPNPIL True PC9_epitope_Rep1 875.45011644379 875.44900993586 42.113 2 0.025897479965315818 0.007002674160358972 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 64359 12766 LQPERYELW True NCI_RA007_Epitope_Rep4 1232.61897267404 1232.6178699358602 56.164 2 0.02588151732236415 0.007002674160358972 0.9438714419765777 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'nc|ENSG00000127663|O94953-2|KDM4B'] 113120 11885 TQAPGNPVL True PC9_epitope_Rep2 895.4763311916299 895.47578496793 51.04 1 0.025875780828745375 0.007002674160358972 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 1474 13096 [Acetylation]-AEELVLER True H1975_Epitope_Rep1 999.5236756231699 999.52317496793 55.464 1 0.02586513929584083 0.007002674160358972 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 24135 5038 EYSKQMQRF True PC9_epitope_Rep6 1215.57064258263 1215.56899490379 27.006 3 0.025858315837638295 0.007002674160358972 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 9165 13943 AVNPHFIAV True PC9_epitope_Rep4 966.5287011176599 966.52760993586 61.536 2 0.025844623526983454 0.007002674160358972 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 5003 22058 ALLAYTLGV True PC9_epitope_Rep5 919.5378688190299 919.53676993586 89.874 2 0.025837395097864584 0.007002674160358972 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF'] 32066 5615 GEVTNVTTA True NCI_RA007_Epitope_Rep4 890.4345259493 890.43342993586 28.199 2 0.02581695997064842 0.007002674160358972 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 17532 6759 EHINSVSAM True PC9_epitope_Rep2 986.44913046762 986.44802993586 31.406 2 0.02578923885896048 0.007002674160358972 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 8772 8184 AVEHLDDLPG True NCI_RA007_Epitope_Rep3 1064.51383889916 1064.51274993586 39.318 2 0.02578613449976666 0.007002674160358972 0.9438714419765777 ['CON__P01966'] 74672 23339 NLIDLDDLYV True PC9_epitope_Rep2 1191.6023195503901 1191.60177496793 95.248 1 0.02577278335639572 0.007002674160358972 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 118116 20547 VAVAGLLTV True PC9_epitope_Rep4 841.52730413533 841.5267549679301 87.185 1 0.025772069270764853 0.007002674160358972 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 33091 11663 GKIDTIEIITD True NCI_RA007_Epitope_Rep4 1216.6550833992399 1216.6539899358602 51.82 2 0.02573268884677938 0.007002674160358972 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 47272 24005 IYEPNFIFF True PC9_epitope_Rep5 1188.5855472874398 1188.5849749679298 97.318 1 0.025719879114913677 0.007002674160358972 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 1775 9984 AEHPIVIVC True H1975_Epitope_Rep2 979.5160878286299 979.51498993586 43.393 2 0.025702304166785025 0.007002674160358972 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37', 'DHX37|p.E276K|1|0.23|ENSG00000150990|chr12:124977403-124977403|C/T|missense_variant'] 34852 8255 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42828993586 39.214 2 0.025695439015388927 0.007002674160358972 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 67720 12187 LTGHLEEVVL True NCI_RA007_Epitope_Rep2 1108.61282466444 1108.61172993586 52.003 2 0.025685338529501178 0.007002674160358972 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF'] 30648 13547 GALETIWR True PC9_epitope_Rep6 944.5079656730799 944.50686993586 63.84 2 0.025667057222218872 0.007002674160358972 0.9438714419765777 ['ENSG00000162461|ENST00000294454|SLC25A34'] 120330 16429 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 68.193 2 0.025658097679080165 0.007002674160358972 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 70848 4315 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 21.714 2 0.025657097925741692 0.007002674160358972 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 82431 17195 PVCPPGGIQEV True PC9_epitope_Rep1 1094.5430308524599 1094.54192993586 70.96 2 0.02565230779683295 0.007002674160358972 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'CON__Q922U2'] 54109 7476 KYMEDYHQF True NCI_RA007_Epitope_Rep4 1259.52810906431 1259.5270099358602 35.403 2 0.025615354822232105 0.007022471910112359 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 109900 4041 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 21.804 2 0.02560767045073837 0.007022471910112359 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 102372 13256 SPVPIAPTA True PC9_epitope_Rep2 851.47526856247 851.47416993586 56.264 2 0.025606663492856944 0.007022471910112359 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 25202 8800 FEADPPGQVA True H1975_Epitope_Rep2 1029.47672511445 1029.47562993586 38.815 2 0.025602588095268684 0.007022471910112359 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 106840 20882 SYIDLLQRF True PC9_epitope_Rep4 1153.6131590176099 1153.61206993586 88.479 2 0.02559034850975489 0.007022471910112359 0.9438714419765777 ['ENSG00000127580|ENST00000293883|WDR24'] 88440 5347 QYTPHSHQF True PC9_epitope_Rep5 1143.50975657823 1143.50812490379 25.582 3 0.025588104341830894 0.007022471910112359 0.9438714419765777 ['ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR'] 104266 11107 SSDTADFRDLY True H1975_Epitope_Rep1 1288.55716026312 1288.55606993586 47.687 2 0.025582125610450958 0.007022471910112359 0.9438714419765777 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3', 'nc|ENSG00000160767|P81408-2|ENTREP3', 'ENSG00000160767|ENST00000361361|ENTREP3', 'ENST00000368366.5_1_1:155217575-155221373:-|nuORF'] 96884 6730 SETALPGA True NCI_RA007_Epitope_Rep3 744.3653837603199 744.36483496793 33.562 1 0.025578037971654203 0.007022471910112359 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 118651 9166 VEAPPVVTA True H1975_Epitope_Rep3 881.4858332461699 881.48472993586 40.247 2 0.02557102340974128 0.007022471910112359 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 136569 6961 YHSPGRNVL True PC9_epitope_Rep1 1041.53557740325 1041.5344899358602 31.582 2 0.025564962932254725 0.007022471910112359 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'ENST00000580540.1_1_17:17720525-17721213:-|nuORF', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 61961 15479 LLLPGELA True H1975_Epitope_Rep2 824.5007550343199 824.50020496793 64.696 1 0.025550556032718153 0.007022471910112359 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'nc|ENSG00000121413|Q8TBC5-2|ZSCAN18', 'nc|ENSG00000121413|Q8TBC5-4|ZSCAN18', 'ENST00000594191.5_1_19:58598487-58609571:-|nuORF', 'ENST00000598497.1_1_19:58600016-58601841:-|nuORF', 'ENST00000600318.1_1_19:58600016-58609306:-|nuORF', 'ENSG00000121413|ENST00000601144|ZSCAN18', 'ZSCAN18|p.P159H|1|0.06|ENSG00000121413|chr19:58088765-58088765|G/T|missense_variant', 'H2BC7|p.K109N|1|0.14|ENSG00000277224|chr6:26199885-26199885|G/C|missense_variant', 'nc|ENSG00000121413|Q8TBC5-3|ZSCAN18', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 34684 18340 GQLPNLQTV True PC9_epitope_Rep1 968.5290950404801 968.5285449679301 75.333 1 0.025543152062551207 0.007022471910112359 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 98024 16421 SHSVIGIAL True PC9_epitope_Rep4 895.5127167003499 895.51160993586 71.125 2 0.0255425503137609 0.007022471910112359 0.9438714419765777 ['nc|ENSG00000183780|Q8IY50|SLC35F3', 'ENSG00000183780|ENST00000366618|SLC35F3'] 61612 17497 LLGSLADLY True H1975_Epitope_Rep2 963.52769805815 963.5271449679301 72.595 1 0.02553936422430267 0.007022471910112359 0.9438714419765777 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7'] 32948 9514 GISDVFAK True NCI_RA007_Epitope_Rep2 835.44396843419 835.44286993586 41.621 2 0.02553105660167693 0.007022471910112359 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 32618 14167 GHFDGVQDL True PC9_epitope_Rep5 986.4457593393399 986.44466993586 59.504 2 0.025526994125671502 0.007022471910112359 0.9438714419765777 ['nc|ENSG00000134759|Q6IA86-4|ELP2', 'nc|ENSG00000134759|Q6IA86-2|ELP2', 'nc|ENSG00000134759|Q6IA86-3|ELP2', 'nc|ENSG00000134759|Q6IA86-5|ELP2', 'ENSG00000134759|ENST00000358232|ELP2', 'nc|ENSG00000134759|Q6IA86-6|ELP2', 'nc|ENSG00000134759|Q6IA86-7|ELP2'] 100137 21247 SLLDKIIGA True PC9_epitope_Rep1 928.5593325396 928.55822993586 86.55 2 0.025509233987630064 0.007022471910112359 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 81624 8579 PRQVGVVV True PC9_epitope_Rep4 852.5181364339599 852.51702993586 40.479 2 0.025504970813150014 0.007022471910112359 0.9438714419765777 ['ENST00000465651.1_1_1:205561255-205569586:+|nuORF'] 127629 17415 VRDPRPWLL True PC9_epitope_Rep5 1150.66111226954 1150.65946490379 71.988 3 0.025497859834826577 0.007043529465054129 0.9438714419765777 ['ENST00000529462.5_1_8:145637924-145638077:-|nuORF', 'ENST00000527148.5_1_8:145635301-145638951:-|nuORF', 'nc|ENSG00000147804|Q6P5W5-2|SLC39A4', 'ENSG00000147804|ENST00000301305|SLC39A4'] 46731 14388 IVAPGKGILAA True PC9_epitope_Rep1 1008.6331661861998 1008.63206993586 60.168 2 0.025483108040071836 0.007043529465054129 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 140161 10275 YVTEKVLAA True PC9_epitope_Rep2 992.5542471591598 992.55314993586 44.854 2 0.02547534000596732 0.007043529465054129 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENSG00000136872|ENST00000647789|ALDOB'] 34720 13225 GQNNSVFTL True NCI_RA007_Epitope_Rep4 978.47705946762 978.47596993586 57.996 2 0.02546714907567767 0.007043529465054129 0.9438714419765777 ['ENSG00000131475|ENST00000253794|VPS25'] 127027 5111 VPYGVGKAA True PC9_epitope_Rep6 860.4756029156398 860.4745099358599 27.343 2 0.025434778808716436 0.007043529465054129 0.9438714419765777 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000558340.1_1_14:24761833-24765739:-|nuORF'] 41106 17613 HYMPPPYASL True PC9_epitope_Rep3 1174.5481162328997 1174.5470099358602 72.936 2 0.025433413135286843 0.007043529465054129 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 24271 14330 FAAEPGNNEL True PC9_epitope_Rep5 1060.48253877088 1060.4814499358602 60.121 2 0.025431312883945803 0.007043529465054129 0.9438714419765777 ['ENSG00000130340|ENST00000392185|SNX9'] 31760 4573 GELKTQMTSA True NCI_RA007_Epitope_Rep3 1064.51721002744 1064.5161099358602 24.874 2 0.025430939169332156 0.007043529465054129 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 26273 18530 FIDDANYSV True PC9_epitope_Rep1 1042.4607406971402 1042.46017496793 76.064 1 0.025409076877997136 0.007043529465054129 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 124807 17535 VLLGKVYVV True PC9_epitope_Rep4 988.63210355704 988.63100993586 75.461 2 0.025391533759223477 0.007043529465054129 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24|p.G413S|1|0.3|ENSG00000114796|chr3:183671046-183671046|G/A|missense_variant'] 39834 10673 HQGATPLVL True PC9_epitope_Rep6 934.5236157372199 934.52250993586 51.871 2 0.02538354219746728 0.007061859170231548 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 47535 23429 IYLPYLQNW True PC9_epitope_Rep1 1208.6229954253201 1208.62247496793 94.904 1 0.02536077946453835 0.007061859170231548 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 2590 7074 AESGQPVVP True H1975_Epitope_Rep2 882.4446967101799 882.44414496793 32.139 1 0.02535525486709502 0.007061859170231548 0.9438714419765777 ['ENSG00000133393|ENST00000255759|CEP20'] 48936 8836 KEYDGVVVV True NCI_RA007_Epitope_Rep3 1006.5335117145797 1006.53240993586 41.85 2 0.025353819257043886 0.007061859170231548 0.9438714419765777 ['ENSG00000198695|ENST00000361681|MT-ND6'] 96849 19490 SESPIVVVL True PC9_epitope_Rep6 941.5433481222899 941.54279496793 87.63 1 0.025343846581791334 0.007061859170231548 0.9438714419765777 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000585864.1_1_18:56807180-56819918:+|nuORF', 'nc|ENSG00000140612|P67812-2|SEC11A', 'nc|ENSG00000140612|P67812-4|SEC11A', 'ENSG00000140612|ENST00000268220|SEC11A', 'nc|ENSG00000140612|P67812-3|SEC11A'] 138346 5127 YRASGEQL True NCI_RA007_Epitope_Rep5 922.45084471978 922.44974993586 26.417 2 0.0253178649035206 0.007061859170231548 0.9438714419765777 ['nc|ENSG00000106328|Q9NQT6-2|FSCN3'] 109744 7841 THGPPVQL True PC9_epitope_Rep6 847.45520182423 847.45410993586 39.555 2 0.025308013899669763 0.007061859170231548 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 72841 21050 NALPPVLTTV True PC9_epitope_Rep1 1023.59644632431 1023.5953499358601 85.799 2 0.02529728822681656 0.007061859170231548 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 67737 5085 LTGPPGVGK True NCI_RA007_Epitope_Rep4 824.4756029156399 824.4745099358599 26.068 2 0.02529174455491811 0.007061859170231548 0.9438714419765777 ['ENSG00000135778|ENST00000366628|NTPCR'] 82436 17114 PVCPPGGIQEV True PC9_epitope_Rep5 1094.5430308524599 1094.54192993586 70.851 2 0.0252827720760215 0.007061859170231548 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'CON__Q922U2'] 78177 6647 PAPPPPPPP True NCI_RA007_Epitope_Rep4 865.46978925921 865.46868993586 32.19 2 0.02528190945823529 0.007061859170231548 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 43229 9008 IGYNPDTV True H1975_Epitope_Rep1 877.41814760917 877.4175949679301 39.553 1 0.025276200610236478 0.007061859170231548 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000443590.1_1_2:107314489-107314633:-|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 26377 11647 FIHQHFVEV True PC9_epitope_Rep6 1154.5872786229402 1154.5856249037902 55.926 3 0.025263136776422977 0.007061859170231548 0.9438714419765777 ['KLHL18|p.S161R|1|0.62|ENSG00000114648|chr3:47330032-47330032|C/A|missense_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 41918 9538 IEAKSNDVLP True H1975_Epitope_Rep2 1084.57643915572 1084.57534993586 41.66 2 0.025257149761916595 0.007061859170231548 0.9438714419765777 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B'] 102058 7559 SPPPPPPPP True PC9_epitope_Rep4 881.4647038787699 881.46360993586 36.451 2 0.025239229341450693 0.007061859170231548 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 96838 8094 SESLNHLLY True H1975_Epitope_Rep2 1074.5345743437401 1074.53346993586 36.081 2 0.025224718321190873 0.007061859170231548 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 109754 19295 THIETVINAL True PC9_epitope_Rep3 1109.60807363717 1109.6069699358602 79.439 2 0.02520954396928697 0.007061859170231548 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'ENST00000524952.2_1_11:985541-988707:+|nuORF', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 72635 22195 MVWEGLNVV True PC9_epitope_Rep3 1045.52665251233 1045.52554993586 90.659 2 0.025202946266740925 0.007061859170231548 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'NMT1-NME1|1|fusion'] 73249 7067 NEIDAEPPA True H1975_Epitope_Rep2 954.42944056886 954.42834993586 32.112 2 0.025200301339398705 0.007061859170231548 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 4123 8151 AHTAGVVL True PC9_epitope_Rep5 766.43373810366 766.43264993586 36.292 2 0.02519066267033582 0.007061859170231548 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 120327 16147 VFPEKGYSF True PC9_epitope_Rep5 1072.5229470308798 1072.52184993586 67.097 2 0.02517858870267393 0.007061859170231548 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 109958 9194 THSLETQEL True PC9_epitope_Rep3 1056.5087535187201 1056.5076499358602 40.302 2 0.02515107738156731 0.007061859170231548 0.9438714419765777 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 1689 3649 AEGPGLSR True NCI_RA007_Epitope_Rep2 785.4031662513701 785.40206993586 18.843 2 0.025144092485163503 0.007061859170231548 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 6362 6635 APRQPGLMA True PC9_epitope_Rep2 939.4960210903898 939.49492993586 30.931 2 0.025140969048179453 0.007061859170231548 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 132113 16228 VYINTAQEF True PC9_epitope_Rep6 1083.5236753068698 1083.52256993586 74.784 2 0.025129557855179164 0.007061859170231548 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 35122 14991 GRTEVSFTL True PC9_epitope_Rep4 1008.52400966004 1008.52290993586 65.601 2 0.025119656831347245 0.007061859170231548 0.9438714419765777 ['ENSG00000188342|ENST00000340473|GTF2F2'] 27966 19335 FQSPPTPFL True PC9_epitope_Rep6 1032.5280324113198 1032.5269299358602 87.02 2 0.02511458614648262 0.007061859170231548 0.9438714419765777 ['ENST00000530791.5_1_11:65687869-65688903:+|nuORF', 'ENSG00000175550|ENST00000312515|DRAP1', 'nc|ENSG00000175550|Q14919-2|DRAP1'] 103261 21259 SQTDFSQLL True PC9_epitope_Rep1 1037.50293986229 1037.5023749679299 86.597 1 0.025085809702994434 0.007081608181180569 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 96833 9888 SESLIKQIP True H1975_Epitope_Rep2 1013.57571087973 1013.5746099358599 43.022 2 0.02506609869232183 0.007081608181180569 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 76249 17058 NSDLNNLLF True H1975_Epitope_Rep1 1048.5189242796 1048.51837496793 71.038 1 0.025063940970876976 0.007081608181180569 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 71085 6604 METAAAVAA True H1975_Epitope_Rep3 833.3953039896098 833.39475496793 30.354 1 0.025043243622719605 0.007081608181180569 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 116864 23175 TYNMVLNLL True PC9_epitope_Rep3 1079.56851732431 1079.56740993586 94.413 2 0.025043016510631903 0.007081608181180569 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 31310 5826 GEAAGSPVP True H1975_Epitope_Rep2 783.37628279719 783.37573496793 27.401 1 0.02503016436877517 0.007081608181180569 0.9438714419765777 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 43215 6364 IGVLDEGK True NCI_RA007_Epitope_Rep5 829.45453311789 829.45342993586 31.154 2 0.025029866264308625 0.007081608181180569 0.9438714419765777 ['ENSG00000170889|ENST00000302907|RPS9'] 103491 16481 SRATSFLL True PC9_epitope_Rep1 893.49706663621 893.49596993586 68.22 2 0.02502095588108462 0.007081608181180569 0.9438714419765777 ['ENSG00000163902|ENST00000296255|RPN1', 'ENST00000481168.1_1_3:128363760-128369658:-|nuORF', 'ENST00000497415.1_1_3:128359957-128369658:-|nuORF'] 106690 14695 SYANVQDGF True PC9_epitope_Rep4 999.4297749220299 999.42866993586 64.458 2 0.025013365175833097 0.007081608181180569 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 75299 19482 NPTLILAA True PC9_epitope_Rep3 811.4803539429099 811.47924993586 80.167 2 0.02501002038201018 0.007081608181180569 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 35485 6294 GTFGGLGSK True NCI_RA007_Epitope_Rep1 822.42356734278 822.42246993586 28.511 2 0.02497154602816682 0.007081608181180569 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 23911 9659 EYNKSWQTF True NCI_RA007_Epitope_Rep3 1201.5403880001697 1201.53928993586 45.071 2 0.024959277604247997 0.007081608181180569 0.9438714419765777 ['ENSG00000198440|ENST00000333201|ZNF583'] 2952 16905 AFGYYGPLR True PC9_epitope_Rep1 1042.5236157372199 1042.5225099358602 69.849 2 0.024950731244177526 0.007081608181180569 0.9438714419765777 ['nc|ENSG00000112081|P84103-2|SRSF3', 'ENSG00000112081|ENST00000373715|SRSF3'] 108621 11329 TEIVKILSA True H1975_Epitope_Rep2 972.5855472874399 972.58444993586 48.626 2 0.02494553636113903 0.007081608181180569 0.9438714419765777 ['DIAPH2|p.R928Lfs*20|1|0.47|ENSG00000147202|chrX:97247778-97247778|G/-|frameshift_variant', 'nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 92432 8392 RQTVAVGVI True NCI_RA007_Epitope_Rep4 941.5658149023698 941.56470993586 39.095 2 0.024926249233049168 0.007081608181180569 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF', 'ENST00000547505.2_1_12:44054544-44054901:+|nuORF'] 104769 4710 STDPAAPNLK True NCI_RA007_Epitope_Rep5 1012.5189242796 1012.51782993586 24.803 2 0.024925852134260403 0.007081608181180569 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 102725 14872 SQDVTTVTL True PC9_epitope_Rep4 962.4920408254201 962.4914949679301 65.144 1 0.024910839466586444 0.007081608181180569 0.9438714419765777 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000460658.5_1_22:31484094-31491444:+|nuORF', 'nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN'] 113497 6031 TQSPSVKSL True PC9_epitope_Rep2 945.51311062317 945.51200993586 28.592 2 0.02491032659902835 0.007081608181180569 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A'] 75787 11743 NRAPSLTL True PC9_epitope_Rep5 870.49231560894 870.49120993586 50.17 2 0.02489875296622532 0.00712572953897661 0.9438714419765777 ['nc|ENSG00000167695|Q8TBR7-1|TLCD3A', 'ENST00000570699.1_1_17:636236-644807:+|nuORF', 'ENSG00000167695|ENST00000308278|TLCD3A'] 8317 13516 ATLNIIHSV True PC9_epitope_Rep6 966.5498304850599 966.54872993586 63.712 2 0.024886498846113766 0.00712572953897661 0.9438714419765777 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 25517 7346 FEQEMATAA True NCI_RA007_Epitope_Rep3 996.4222470134398 996.42114993586 36.019 2 0.02487914761241515 0.00712572953897661 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 80642 17589 PLPPLPPPP True PC9_epitope_Rep4 923.5480395799099 923.54694993586 75.671 2 0.02484537027498062 0.00712572953897661 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 39840 8537 HQGGPAVAL True PC9_epitope_Rep3 848.4504507969599 848.44934993586 37.793 2 0.02481838929032835 0.00712572953897661 0.9438714419765777 ['ENSG00000231274|ENST00000612221|SBK3'] 109017 12448 TEWDDIHVV True NCI_RA007_Epitope_Rep3 1112.5138388991597 1112.51274993586 56.184 2 0.024781181570722413 0.00712572953897661 0.9438714419765777 ['nc|ENSG00000123329|Q9BRR9-4|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9-3|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9-5|ARHGAP9', 'ENSG00000123329|ENST00000393791|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9|ARHGAP9'] 62892 23014 LMSLIINTF True PC9_epitope_Rep2 1050.57835373202 1050.5772499358602 94.017 2 0.02478035926182207 0.00712572953897661 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 47612 16419 IYPDSFTVL True NCI_RA007_Epitope_Rep3 1053.53826274185 1053.5371699358602 72.331 2 0.024757468599820222 0.007143341546669078 0.9438714419765777 ['RWDD1-FAM26D|1|fusion', 'ENSG00000111832|ENST00000466444|RWDD1'] 4763 4912 ALEENNNFSK True NCI_RA007_Epitope_Rep1 1164.54111627616 1164.54000993586 23.187 2 0.024728379579369766 0.007143341546669078 0.9438714419765777 ['ENSG00000104435|ENST00000220876|STMN2', 'nc|ENSG00000104435|Q93045-2|STMN2'] 6006 8981 APLLQPRAA True PC9_epitope_Rep1 935.5552502186699 935.55414993586 39.391 2 0.02470860319404447 0.007143341546669078 0.9438714419765777 ['ENST00000257700.6_1_7:105172682-105177020:+|nuORF'] 24455 8001 FAHTNVESL True NCI_RA007_Epitope_Rep1 1016.4927095317599 1016.49160993586 35.116 2 0.024686535958368554 0.007143341546669078 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 8315 15048 ATLNIIHSV True PC9_epitope_Rep2 966.5498304850599 966.54872993586 63.141 2 0.024655964714825725 0.007143341546669078 0.9438714419765777 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 46490 19787 ITPENLPQI True PC9_epitope_Rep2 1023.5600608155898 1023.5589699358601 81.499 2 0.024629619197483608 0.007143341546669078 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 11959 16588 DHTAPLLL True PC9_epitope_Rep4 878.48616759934 878.48506993586 71.782 2 0.02462416776267131 0.007143341546669078 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD'] 95387 10341 SAIGLADPP True NCI_RA007_Epitope_Rep5 839.4388830537499 839.43778993586 46.405 2 0.02461548929182891 0.007143341546669078 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 65 13058 AAAGSPVFL True H1975_Epitope_Rep2 831.44905381463 831.44794993586 55.35 2 0.024608959313077904 0.007143341546669078 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 37484 14500 GYEPPVQESV True PC9_epitope_Rep1 1103.51350454599 1103.5124099358602 60.6 2 0.024608417634823333 0.007143341546669078 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 29749 9361 FVRCCGLVLGA True NCI_RA007_Epitope_Rep3 1136.5834561958 1136.58234993586 43.913 2 0.02460760232729605 0.007143341546669078 0.9438714419765777 ['ENST00000585091.1_1_17:79977083-79977522:-|nuORF'] 44210 5802 ILSGVVTK True NCI_RA007_Epitope_Rep5 815.51165407119 815.51054993586 29.004 2 0.02459599948131793 0.007143341546669078 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 33864 23355 GLVPFLVSV True PC9_epitope_Rep2 929.5586042636099 929.55805496793 95.309 1 0.02457488400050533 0.007143341546669078 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 104092 18525 SRVFSVAEL True PC9_epitope_Rep3 1006.5447451046199 1006.54364993586 76.474 2 0.024568706967868493 0.007143341546669078 0.9438714419765777 ['ENSG00000181029|ENST00000596148|TRAPPC5'] 21718 6984 ERYSGNQVL True PC9_epitope_Rep4 1064.5250722892 1064.5239699358601 34.109 2 0.024566352084544 0.007143341546669078 0.9438714419765777 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 33206 17170 GLAAGGIVAV True PC9_epitope_Rep6 826.4912529797799 826.49014993586 78.63 2 0.02455663354271931 0.007143341546669078 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 102698 16603 SQDPTMIGV True PC9_epitope_Rep3 946.44298245802 946.44243496793 69.0 1 0.024549740743809525 0.007143341546669078 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 2152 13856 AELYGPFTSA True H1975_Epitope_Rep3 1054.49712620586 1054.49657496793 58.605 1 0.024542427162652147 0.007143341546669078 0.9438714419765777 ['ENSG00000169217|ENST00000305596|CD2BP2'] 45135 22117 IQVWLYEQV True PC9_epitope_Rep5 1176.6179100448799 1176.6168099358601 90.107 2 0.02452049227342016 0.007143341546669078 0.9438714419765777 ['ENSG00000182004|ENST00000414487|SNRPE', 'ENST00000338402.6_1_16:20250446-20250542:-|nuORF'] 89592 5771 RESLASPVA True H1975_Epitope_Rep3 928.4977949121999 928.49668993586 27.224 2 0.024505662044770837 0.007143341546669078 0.9438714419765777 ['ENST00000373622.9_1_20:35807565-35812612:+|nuORF'] 120600 11813 VGAGAPVYLAA True H1975_Epitope_Rep3 987.5389314481899 987.53782993586 50.586 2 0.024499817236277928 0.007143341546669078 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 17399 7002 EHFPNHQQL True PC9_epitope_Rep1 1148.53630567924 1148.53465490379 31.738 3 0.024484213476424713 0.007143341546669078 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 88557 5921 RAIEALHGHEL True NCI_RA007_Epitope_Rep4 1244.6625688215202 1244.66092490379 29.396 3 0.024467600985471266 0.007143341546669078 0.9438714419765777 ['nc|ENSG00000239306|Q96PK6-5|RBM14', 'nc|ENSG00000239306|Q96PK6-3|RBM14', 'nc|ENSG00000239306|Q96PK6-4|RBM14', 'ENST00000511114.1_1_11:66384104-66406046:+|nuORF', 'nc|ENSG00000239306|Q96PK6-2|RBM14', 'ENST00000512283.1_1_11:66384104-66384788:+|nuORF', 'RBM14|p.D163Tfs*68|2|0.19|ENSG00000239306|chr11:66624360-66624360|G/-|frameshift_variant', 'ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 101927 5609 SPLNTPHTSA True PC9_epitope_Rep1 1023.4985231881901 1023.4974299358599 26.402 2 0.024466549776464105 0.007143341546669078 0.9438714419765777 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 27153 9744 FLRTKELDL True NCI_RA007_Epitope_Rep3 1133.6444591458899 1133.64280490379 45.395 3 0.024453422378307787 0.007143341546669078 0.9438714419765777 ['nc|ENSG00000136636|Q9Y597-2|KCTD3', 'ENSG00000136636|ENST00000259154|KCTD3'] 46125 14036 ITAGKLVTL True PC9_epitope_Rep4 914.58006798418 914.57896993586 61.9 2 0.024438925970925274 0.007143341546669078 0.9438714419765777 ['ENSG00000139410|ENST00000403593|SDSL'] 88969 3218 REDPDSVPP True H1975_Epitope_Rep2 1010.46688870674 1010.46578993586 16.941 2 0.02439343072163524 0.007143341546669078 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 28720 15130 FSVTGRVL True PC9_epitope_Rep1 877.50215201665 877.50104993586 63.018 2 0.024383871132937697 0.007143341546669078 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 47461 19960 IYIWDLNNF True NCI_RA007_Epitope_Rep4 1196.5866099165999 1196.58550993586 86.314 2 0.024382797559309565 0.007143341546669078 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 11743 14009 DHHENKYLLL True PC9_epitope_Rep3 1280.65133543148 1280.6496749037901 58.967 3 0.024364749245543 0.007143341546669078 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 72439 22386 M[Oxidation]TLLLLPLL True PC9_epitope_Rep6 1041.65079077673 1041.6496899358601 99.077 2 0.024361213120527345 0.007143341546669078 0.9438714419765777 ['ENSG00000139182|ENST00000266546|CLSTN3'] 46815 11327 IVDSATALY True H1975_Epitope_Rep2 951.49131254943 951.49020993586 48.618 2 0.02433186121761641 0.0071609288876841055 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 17405 5458 EHFPNHQQL True PC9_epitope_Rep2 1148.53630567924 1148.53465490379 26.39 3 0.024321911630888822 0.0071609288876841055 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 34471 19903 GQDGLYIGV True PC9_epitope_Rep2 920.4603467743199 920.45924993586 81.952 2 0.024320014791972554 0.0071609288876841055 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 1349 12094 AEEDPPWAP True H1975_Epitope_Rep3 1010.4345259492999 1010.43397496793 51.684 1 0.024311417886394848 0.0071609288876841055 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 102015 3262 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 16.581 2 0.024293061252738765 0.0071609288876841055 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 99097 12544 SLAEGLRTV True PC9_epitope_Rep5 944.52909504048 944.52798993586 53.249 2 0.024288138870114342 0.0071609288876841055 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 68107 9014 LTPEELER True PC9_epitope_Rep3 985.5080252427299 985.50692993586 39.616 2 0.02428377075702816 0.0071609288876841055 0.9438714419765777 ['ENSG00000049247|ENST00000361696|UTS2', 'nc|ENSG00000049247|O95399-2|UTS2'] 132428 14398 VYNPTPNSL True PC9_epitope_Rep3 1003.49746055903 1003.49636993586 60.479 2 0.024249445273418407 0.0071609288876841055 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 41133 19740 HYPPVQVLF True PC9_epitope_Rep2 1098.58621599378 1098.5851099358601 81.319 2 0.024248261444348742 0.0071609288876841055 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 85063 18640 QILPTLVRL True PC9_epitope_Rep6 1051.67536535135 1051.6742699358601 84.342 2 0.024219799894351128 0.0071609288876841055 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 106677 9868 SYAMANTGI True NCI_RA007_Epitope_Rep3 926.41676771018 926.41566993586 45.889 2 0.02421507577641374 0.0071609288876841055 0.9438714419765777 ['ENSG00000134294|ENST00000256689|SLC38A2', 'ENSG00000139209|ENST00000266579|SLC38A4'] 23973 19137 EYPDRIMNTF True PC9_epitope_Rep1 1284.5808729131597 1284.5802749679299 78.403 1 0.02418484191900673 0.0071609288876841055 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 126832 4204 VPSYPSKSA True PC9_epitope_Rep4 934.47599683846 934.47488993586 22.542 2 0.02415828033373374 0.0071609288876841055 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 72115 12807 MRDPTFVRL True PC9_epitope_Rep4 1133.60154878809 1133.59990490379 57.122 3 0.024143263800965986 0.0071609288876841055 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 96913 6959 SETKIFTA True NCI_RA007_Epitope_Rep4 895.4650978015899 895.46400993586 33.394 2 0.024105935576176372 0.0071609288876841055 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 71528 12369 MKTILSNQTVD True PC9_epitope_Rep5 1248.63838778928 1248.63728993586 52.574 2 0.024105801026504906 0.0071609288876841055 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000514842.5_1_4:39459094-39460113:-|nuORF'] 67107 11963 LTDDDLLRY True H1975_Epitope_Rep1 1122.55570371114 1122.55460993586 51.02 2 0.024087748930900887 0.0071609288876841055 0.9438714419765777 ['ENSG00000114480|ENST00000429644|GBE1', 'ENST00000484687.1_1_3:81584326-81627079:-|nuORF'] 49392 14166 KIIYIVHDEV True PC9_epitope_Rep1 1227.6863239578702 1227.68467490379 59.311 3 0.024046235136054393 0.0071609288876841055 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3'] 14158 9364 DSLPLVDTHS True NCI_RA007_Epitope_Rep3 1082.52440358286 1082.5233099358602 43.923 2 0.02403247200211664 0.0071609288876841055 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000487938.5_1_10:17278234-17279267:+|nuORF'] 28390 11771 FSDVDSPYY True H1975_Epitope_Rep1 1091.44475627983 1091.44417496793 50.269 1 0.024008351505027246 0.0071609288876841055 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 68694 22295 LVDDNYFYL True PC9_epitope_Rep2 1160.5389910178399 1160.5378899358602 91.235 2 0.02400026048385634 0.0071609288876841055 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 23916 14896 EYNKSWQTF True PC9_epitope_Rep5 1201.5403880001697 1201.53928993586 62.301 2 0.0239958226039325 0.0071609288876841055 0.9438714419765777 ['ENSG00000198440|ENST00000333201|ZNF583'] 64016 5191 LQDAEIAR True PC9_epitope_Rep2 914.4821448480599 914.48104993586 25.355 2 0.023994384223256258 0.0071609288876841055 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 92223 11653 RQIIAVVL True NCI_RA007_Epitope_Rep3 910.5963867546599 910.59528993586 52.957 2 0.023991196330723927 0.0071609288876841055 0.9438714419765777 ['ENST00000491113.1_1_20:35234354-35236222:+|nuORF', 'nc|ENSG00000101084|Q9BUV8-4|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-3|RAB5IF', 'ENSG00000101084|ENST00000344795|RAB5IF', 'nc|ENSG00000101084|Q9BUV8|RAB5IF', 'nc|ENSG00000101084|Q9BUV8-5|RAB5IF', 'nc|ENSG00000118707|Q9GZN2-2|TGIF2'] 86191 17368 QPTQVTLITA True PC9_epitope_Rep5 1070.5971746003 1070.5960699358602 71.806 2 0.02398229292813497 0.0071609288876841055 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 45211 17496 IRKPYIWEY True PC9_epitope_Rep3 1266.67609362734 1266.6744449037901 72.474 3 0.023969319143151997 0.0071609288876841055 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 58804 12439 LFQEREHVLRL True PC9_epitope_Rep4 1438.80448202794 1438.80283490379 55.653 3 0.023937983402561182 0.0071609288876841055 0.9438714419765777 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 124887 21147 VLLNEILEQV True PC9_epitope_Rep6 1168.67033954056 1168.66924993586 94.188 2 0.023930794654700712 0.0071609288876841055 0.9438714419765777 ['ENSG00000109805|ENST00000251496|NCAPG'] 96822 10978 SESGIQMVP True NCI_RA007_Epitope_Rep4 946.44298245802 946.44243496793 49.096 1 0.023908307227504547 0.0071609288876841055 0.9438714419765777 ['ENSG00000171311|ENST00000370902|EXOSC1'] 123696 8350 VIPELNGK True PC9_epitope_Rep2 868.50181766348 868.50072993586 37.488 2 0.023908229434310237 0.0071609288876841055 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 119147 12483 VEIPDPVEA True H1975_Epitope_Rep1 967.4862271689899 967.48512993586 53.056 2 0.023905013673111104 0.0071609288876841055 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 134423 14715 WTEMNTIVY True H1975_Epitope_Rep3 1155.52704643515 1155.52647496793 61.974 1 0.02386014940286046 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 132626 10593 VYPTKTFPNL True NCI_RA007_Epitope_Rep3 1178.6335601090198 1178.6324699358602 48.717 2 0.023852764755084552 0.007173957181853046 0.9438714419765777 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 47540 23367 IYLPYLQNW True PC9_epitope_Rep5 1208.6229954253201 1208.62247496793 94.865 1 0.023852287699115994 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 96285 11256 SEETMVLEA True H1975_Epitope_Rep2 1007.4481274081098 1007.44702993586 48.341 2 0.023844019072059026 0.007173957181853046 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'C3|p.K263Rfs*40|2|0.22|ENSG00000125730|chr19:6713497-6713497|C/-|frameshift_variant'] 15337 9927 EALATLPSSP True H1975_Epitope_Rep3 984.51277627 984.51222496793 43.217 1 0.023843092407424906 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF'] 39420 19067 HMAVAFVL True PC9_epitope_Rep4 886.4734947406599 886.47238993586 81.432 2 0.023798746664445834 0.007173957181853046 0.9438714419765777 ['ENSG00000164919|ENST00000520468|COX6C'] 39594 9112 HPKYSDMIVA True PC9_epitope_Rep6 1159.56957995347 1159.56848993586 45.141 2 0.023791321325559316 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 106200 15103 SVPKELVAL True PC9_epitope_Rep4 954.5749826037398 954.57388993586 66.022 2 0.023782912874498317 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000553041.5_1_12:96414526-96429297:-|nuORF', 'LTA4H|p.G387Afs*19|1|0.18|ENSG00000111144|chr12:96014899-96014899|C/-|frameshift_variant'] 55481 12637 LAVHPSGVAL True PC9_epitope_Rep4 962.5549158654999 962.55380993586 56.448 2 0.02376130456713178 0.007173957181853046 0.9438714419765777 ['ENSG00000187608|ENST00000649529|ISG15'] 106623 19163 SWPEGHFATI True PC9_epitope_Rep1 1143.53490869691 1143.53380993586 78.505 2 0.02373057661042423 0.007173957181853046 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1'] 61834 18914 LLLAQLSDA True PC9_epitope_Rep6 942.53859709502 942.53750993586 85.397 2 0.023704491362570877 0.007173957181853046 0.9438714419765777 ['ENSG00000175348|ENST00000534025|TMEM9B'] 99915 20931 SLIADLEQL True PC9_epitope_Rep6 1000.5440763982799 1000.54296993586 93.284 2 0.023701022129533667 0.007173957181853046 0.9438714419765777 ['ENSG00000162458|ENST00000375766|FBLIM1', 'nc|ENSG00000162458|Q8WUP2-2|FBLIM1'] 116372 20393 TVYPGLMITA True PC9_epitope_Rep4 1064.55761828744 1064.55652993586 86.588 2 0.023650596720382215 0.007173957181853046 0.9438714419765777 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 2783 7452 AEVDAAMAA True NCI_RA007_Epitope_Rep5 847.3745685450299 847.3740149679301 35.344 1 0.023647730803313786 0.007173957181853046 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 4331 19684 AINDSFLSA True PC9_epitope_Rep1 936.45526139388 936.45416993586 80.538 2 0.023639189738934595 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 135928 8282 YEVQQVPKV True H1975_Epitope_Rep2 1088.5866099165999 1088.58550993586 36.807 2 0.02362844856379499 0.007173957181853046 0.9438714419765777 ['ENSG00000174606|ENST00000366962|ANGEL2', 'nc|ENSG00000174606|Q5VTE6-2|ANGEL2'] 106685 10769 SYANVQDGF True NCI_RA007_Epitope_Rep5 999.4297749220299 999.42866993586 48.058 2 0.023627607452982927 0.007173957181853046 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 85364 10959 QLDTHMELY True H1975_Epitope_Rep2 1148.51721002744 1148.5161099358602 47.185 2 0.02360257840996801 0.007173957181853046 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 52027 6487 KLFVGGLK True NCI_RA007_Epitope_Rep4 860.5483739330798 860.54726993586 31.55 2 0.02360081503209842 0.007173957181853046 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 2804 13314 AEVEMVIPA True H1975_Epitope_Rep2 957.4841189940098 957.48302993586 56.343 2 0.02359967114650274 0.007173957181853046 0.9438714419765777 ['ENSG00000133812|ENST00000256190|SBF2', 'ARHGAP42-SBF2|1|fusion', 'ENST00000525040.5_1_11:9801967-9809483:-|nuORF'] 11709 14658 DHFISSSL True PC9_epitope_Rep5 904.4290466460401 904.4279499358599 61.386 2 0.023596254833740418 0.007173957181853046 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'ENST00000566127.1_1_16:29552630-29552998:-|nuORF', 'ENST00000568855.1_1_16:70265056-70269235:-|nuORF'] 118341 7404 VDFNVPM[Oxidation]K True H1975_Epitope_Rep1 964.4688036634799 964.46770993586 33.483 2 0.023591542024243815 0.007173957181853046 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 39729 12291 HPWETVTTAA True PC9_epitope_Rep1 1111.52982331647 1111.5287299358602 52.13 2 0.023564047136438344 0.007173957181853046 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 101767 5163 SPHPPSEVTA True PC9_epitope_Rep4 1020.48762415132 1020.48652993586 26.547 2 0.023559076160907848 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 53818 15746 KYFLWVVKF True NCI_RA007_Epitope_Rep5 1228.7008518231999 1228.6997499358602 67.283 2 0.02355292182161515 0.007173957181853046 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 44510 18023 IPAALPVAA True PC9_epitope_Rep1 821.50108938749 821.49998993586 74.118 2 0.023547721915880036 0.007173957181853046 0.9438714419765777 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.L269Pfs*11|1|0.15|ENSG00000145715|chr5:87332616-87332620|TTACT/-|frameshift_variant', 'RASA1|p.N407Sfs*3|1|0.22|ENSG00000145715|chr5:87349329-87349332|CAAT/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1', 'RASA1|p.L146Sfs*24|1|0.5|ENSG00000145715|chr5:87268885-87268897|CTTTGGGGGCGGG/-|frameshift_variant'] 86838 14745 QRQDIAFAY True PC9_epitope_Rep1 1110.5458077337798 1110.54527496793 61.536 1 0.023544237525865725 0.007173957181853046 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF'] 39715 11201 HPVHPFLAV True PC9_epitope_Rep4 1015.56033559911 1015.55922993586 50.862 2 0.023521084453405488 0.007173957181853046 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 126970 8435 VPVSLKEA True PC9_epitope_Rep3 841.49091862661 841.48982993586 37.409 2 0.023519971248957904 0.007173957181853046 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 25502 4230 FEQDVGSRTT True H1975_Epitope_Rep2 1138.5254662120199 1138.52436993586 21.379 2 0.023504094798954055 0.007173957181853046 0.9438714419765777 ['ENSG00000157350|ENST00000342907|ST3GAL2'] 29404 21638 FVFPGELLL True H1975_Epitope_Rep1 1033.5848190114498 1033.58427496793 89.919 1 0.023500304112842832 0.007173957181853046 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 118377 5904 VDITTPKAA True NCI_RA007_Epitope_Rep5 914.5072969667399 914.50618993586 29.397 2 0.023499361398523277 0.007173957181853046 0.9438714419765777 ['ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'PSIP1|p.K246Afs*3|1|0.34|ENSG00000164985|chr9:15474127-15474131|TCTTT/-|frameshift_variant', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000422292.2_1_9:15055292-15055805:+|nuORF'] 1502 6393 AEEPASVTP True H1975_Epitope_Rep3 899.42362691243 899.42307496793 29.569 1 0.02349855164721701 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF'] 77204 17808 NYGRVFSEW True PC9_epitope_Rep4 1156.53015766964 1156.5290699358602 76.531 2 0.023496873504576504 0.007173957181853046 0.9438714419765777 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 33869 21444 GLVPFLVSV True PC9_epitope_Rep6 929.5586042636099 929.55805496793 95.361 1 0.023482318599407977 0.007173957181853046 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 13842 11522 DRAGSIVL True PC9_epitope_Rep2 829.46576650793 829.46466993586 49.647 2 0.023467406369475054 0.007173957181853046 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 107254 10739 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59198993586 46.299 2 0.023462982373526477 0.007173957181853046 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 123697 9084 VIPELNGK True PC9_epitope_Rep3 868.50181766348 868.50072993586 39.881 2 0.02345105503869643 0.007173957181853046 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 412 19784 AALNTIVTV True PC9_epitope_Rep5 900.5280324113199 900.52692993586 81.145 2 0.023449146429170627 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 42190 4044 IEGDNENKLPR True H1975_Epitope_Rep3 1283.64697832703 1283.64532490379 20.685 3 0.023428778937422887 0.007173957181853046 0.9438714419765777 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000476672.1_1_3:180675662-180688154:+|nuORF'] 43088 16192 IGLFGGAGVGK True PC9_epitope_Rep5 974.5549158654998 974.55380993586 67.272 2 0.023419353314720063 0.007173957181853046 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 6658 18076 AQAGALLQV True PC9_epitope_Rep1 869.49706663621 869.49651496793 74.322 1 0.023416092898429317 0.007173957181853046 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 1569 5373 AEFAEVSK True PC9_epitope_Rep2 879.43379767331 879.43270993586 26.055 2 0.02341102544475473 0.007173957181853046 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 48789 7870 KEQVPGFTP True H1975_Epitope_Rep1 1001.5181960036098 1001.51708993586 35.222 2 0.02339646630088979 0.007173957181853046 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 9875 19787 AYM[Oxidation]PHTFFI True PC9_epitope_Rep5 1141.52665289277 1141.52554993586 81.156 2 0.023386184965777174 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 54477 8286 LAAARLAAA True PC9_epitope_Rep3 826.5024863698198 826.50138993586 36.846 2 0.0233792722082899 0.007173957181853046 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 31430 13432 GEDPITFAP True H1975_Epitope_Rep2 945.4443623570099 945.44381496793 56.8 1 0.023358842242997436 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12', 'ENST00000481154.1_1_7:77214868-77221624:+|nuORF', 'ENST00000494248.1_1_7:77214868-77230160:+|nuORF'] 89048 9717 REEFPTLQA True H1975_Epitope_Rep2 1089.5454733806098 1089.54436993586 42.362 2 0.023350658570336993 0.007173957181853046 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 135266 19703 YAYFNFPEL True H1975_Epitope_Rep1 1162.5335117145798 1162.5324099358602 82.012 2 0.02334716415336372 0.007173957181853046 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 63466 21281 LPHFILVEC True PC9_epitope_Rep5 1069.56303802105 1069.5619499358602 86.91 2 0.023344731149170263 0.007173957181853046 0.9438714419765777 ['ENSG00000051382|ENST00000674063|PIK3CB', 'PIK3CB-BFSP2|1|fusion'] 105867 17679 SVKNGFLTI True PC9_epitope_Rep3 977.55458151233 977.55348993586 73.198 2 0.023329026947503585 0.007173957181853046 0.9438714419765777 ['ASAP2|p.L787Afs*16|1|0.25|ENSG00000151693|chr2:9388513-9388514|-/C|frameshift_variant', 'nc|ENSG00000151693|O43150-2|ASAP2', 'ENSG00000151693|ENST00000281419|ASAP2'] 39570 16861 HPIEPVLITA True PC9_epitope_Rep3 1088.62299542532 1088.62188993586 70.009 2 0.02332203182414238 0.007173957181853046 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 27197 14458 FLSSEAANV True PC9_epitope_Rep1 936.4552613938799 936.45416993586 60.436 2 0.023321713646463387 0.007173957181853046 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 91794 11228 RPLLKAITA True PC9_epitope_Rep3 981.63350053937 981.63240993586 48.196 2 0.023320314309044198 0.007173957181853046 0.9438714419765777 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 123305 9372 VHSPPNVGL True PC9_epitope_Rep2 918.49231560894 918.49120993586 41.383 2 0.0233060742484287 0.007173957181853046 0.9438714419765777 ['ENSG00000146247|ENST00000275034|PHIP', 'PHIP|p.G744Efs*5|1|0.13|ENSG00000146247|chr6:78990956-78990956|C/-|frameshift_variant'] 131021 22239 VVLGNLEITYV True PC9_epitope_Rep2 1218.6859896047001 1218.6848899358602 91.02 2 0.023291448891349056 0.007173957181853046 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR', 'nc|ENSG00000146648|P00533-2|EGFR', 'nc|ENSG00000146648|P00533-4|EGFR', 'nc|ENSG00000146648|P00533-3|EGFR'] 78201 8774 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 38.692 2 0.023290664999534867 0.007173957181853046 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 46782 12463 IVDEAIYY True H1975_Epitope_Rep1 984.4804135125601 984.4798649679301 52.976 1 0.023287413752859202 0.007173957181853046 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 113609 6659 TRATEGMVVA True PC9_epitope_Rep4 1033.5226297610498 1033.5215299358601 32.787 2 0.023276502501847218 0.007173957181853046 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7', 'ENST00000498485.5_1_9:127146904-127177393:-|nuORF'] 1229 7821 AEDGPPTVAP True H1975_Epitope_Rep2 952.45017601344 952.44962496793 35.032 1 0.02327208775280529 0.007194569115225874 0.9438714419765777 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ'] 97004 15902 SEVPSFLV True H1975_Epitope_Rep2 876.45928414516 876.45873496793 66.368 1 0.023262527266730677 0.007194569115225874 0.9438714419765777 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'nc|ENSG00000011143|Q9NXB0-2|MKS1'] 84531 9293 QHADPPVQI True PC9_epitope_Rep2 1003.50869394907 1003.50758993586 41.086 2 0.02325805269591665 0.007194569115225874 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 34637 12823 GQIQEAIAL True NCI_RA007_Epitope_Rep5 941.5181960036098 941.51708993586 56.005 2 0.023244585413781015 0.007194569115225874 0.9438714419765777 ['ENSG00000101193|ENST00000266069|GID8'] 105383 14473 SVAAQLTGV True PC9_epitope_Rep4 844.4654321547599 844.46432993586 63.581 2 0.023235341598733514 0.007194569115225874 0.9438714419765777 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 117993 9193 VASGSAVVL True H1975_Epitope_Rep2 801.45961849833 801.4590749679301 40.314 1 0.023234987064847577 0.007194569115225874 0.9438714419765777 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 31801 12313 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43661496793 52.446 1 0.023228640075080277 0.007194569115225874 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 67210 4439 LTDKDTGVTRY True H1975_Epitope_Rep3 1267.6408303174298 1267.63918490379 22.197 3 0.023225314876296043 0.007194569115225874 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 138027 9572 YQDLLNVK True NCI_RA007_Epitope_Rep1 991.5338460677499 991.53274993586 41.232 2 0.023209509839195043 0.007194569115225874 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 102299 6147 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 29.037 2 0.023193963762924482 0.007194569115225874 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 74971 20695 NLVPMIIHL True PC9_epitope_Rep4 1048.61032256664 1048.6092299358602 87.764 2 0.023170514713500744 0.007194569115225874 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4'] 95119 7138 RYVPRASYF True NCI_RA007_Epitope_Rep3 1157.5981776598098 1157.59654490379 35.197 3 0.023169589957560098 0.007194569115225874 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 47866 12384 IYTNLNQKI True PC9_epitope_Rep3 1105.61315901761 1105.61206993586 52.665 2 0.02313623719227547 0.007215495276105437 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 132003 20294 VYGPLPQSF True PC9_epitope_Rep2 1006.5123823471798 1006.51187496793 83.483 1 0.02312451883098828 0.007215495276105437 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 117110 14604 TYSHGNYLF True PC9_epitope_Rep2 1100.49270953176 1100.4916099358602 61.443 2 0.023119227274417103 0.007215495276105437 0.9438714419765777 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 24139 16722 EYSKYLQQAF True PC9_epitope_Rep4 1275.6135529404298 1275.61244993586 72.29 2 0.023101811268443948 0.007215495276105437 0.9438714419765777 ['nc|ENSG00000162702|Q9Y2X9-2|ZNF281', 'ENSG00000162702|ENST00000367353|ZNF281'] 116658 21934 TYIPPLLVAF True PC9_epitope_Rep6 1132.6532329244399 1132.65212993586 97.277 2 0.023093488210668825 0.007215495276105437 0.9438714419765777 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF', 'ENST00000561809.1_1_16:75589903-75590146:-|nuORF'] 105449 8666 SVAQPIHL True H1975_Epitope_Rep2 863.48650195251 863.48540993586 38.292 2 0.023086469777520168 0.007215495276105437 0.9438714419765777 ['nc|ENSG00000161888|Q8NBT2-2|SPC24', 'ENST00000423327.2_1_19:11257861-11259987:-|nuORF', 'ENSG00000161888|ENST00000592540|SPC24'] 34473 20130 GQDGLYIGV True PC9_epitope_Rep3 920.4603467743199 920.45924993586 82.683 2 0.02308124837299322 0.007215495276105437 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 96438 10763 SEIIESVPP True H1975_Epitope_Rep2 969.5018772331299 969.50132496793 46.43 1 0.023071839322609873 0.007215495276105437 0.9438714419765777 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 47319 20308 IYGLLKNPF True PC9_epitope_Rep2 1063.60661708519 1063.6055299358602 83.538 2 0.02303310014354987 0.007215495276105437 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1', 'ENST00000463270.1_1_10:27418274-27425210:-|nuORF'] 100870 13662 SLSGELREV True PC9_epitope_Rep3 988.5189242795999 988.51782993586 57.615 2 0.023023687584160218 0.007215495276105437 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 1132 7805 AEAPPPSVV True H1975_Epitope_Rep3 865.45453311789 865.4539849679301 35.005 1 0.022983779253859155 0.007235107174251133 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 1287 7383 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 33.339 2 0.022943984692857328 0.007235107174251133 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 107095 20850 SYMFVDENTF True PC9_epitope_Rep4 1251.5117902938298 1251.51068993586 88.353 2 0.022927845265995478 0.007235107174251133 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 31865 5089 GEQEGAM[Oxidation]VAA True H1975_Epitope_Rep3 977.4124109861698 977.41130993586 24.69 2 0.02291312856177011 0.007235107174251133 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 98406 20353 SIIGRLLEV True PC9_epitope_Rep4 998.6124307416198 998.6118849679301 86.43 1 0.022904295326219428 0.007235107174251133 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA'] 63774 13232 LPSDIAAEA True PC9_epitope_Rep4 885.4443623570099 885.44381496793 58.793 1 0.02290042049839709 0.007235107174251133 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 44833 19905 IPVYSPLSA True PC9_epitope_Rep5 945.5171333744499 945.51602993586 81.619 2 0.022897461646030362 0.007235107174251133 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 24450 14703 FAHPYQYEL True PC9_epitope_Rep4 1166.53965972418 1166.53856993586 64.49 2 0.02288957631621412 0.007235107174251133 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 5676 20206 APALLLIPAA True PC9_epitope_Rep6 948.60080342876 948.59970993586 90.396 2 0.022869338783918367 0.007235107174251133 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 86458 9025 QQSELQSQV True PC9_epitope_Rep3 1045.5040024914501 1045.50290993586 39.657 2 0.022841544166922217 0.007235107174251133 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'ENST00000584106.1_1_17:37026403-37055075:+|nuORF', 'nc|ENSG00000002834|Q14847-2|LASP1', 'nc|ENSG00000078114|O76041-2|NEBL'] 54285 8525 KYPNVFKKI True PC9_epitope_Rep4 1135.67536535135 1135.67371490379 40.269 3 0.022841335920489928 0.007235107174251133 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 91524 4511 RPAAQPSFHQA True PC9_epitope_Rep5 1208.6050539454 1208.60341490379 22.419 3 0.022832334609054376 0.007235107174251133 0.9438714419765777 ['ENSG00000151929|ENST00000369085|BAG3'] 38014 9021 HEIESLYTKL True NCI_RA007_Epitope_Rep3 1231.6448530687098 1231.6437499358601 42.579 2 0.022819787768638678 0.007235107174251133 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1', 'ENST00000542424.1_1_12:1005827-1009868:+|nuORF'] 35882 20497 GVAETLVLV True PC9_epitope_Rep4 899.5327834385898 899.5322349679301 86.992 1 0.02280066335129126 0.007235107174251133 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 54675 8010 LAEAALELREE True H1975_Epitope_Rep3 1242.6455813446998 1242.64448993586 35.783 2 0.022788538924412023 0.007235107174251133 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 114809 4879 TTDENKVPY True H1975_Epitope_Rep2 1065.4978544818498 1065.4967499358602 23.853 2 0.02278645077056787 0.007235107174251133 0.9438714419765777 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 77663 6448 PAAAAAAAAAA True PC9_epitope_Rep2 825.4344663796498 825.43336993586 30.216 2 0.022740185843790568 0.007235107174251133 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 17406 5672 EHFPNHQQL True PC9_epitope_Rep2 1148.53630567924 1148.53465490379 27.207 3 0.022736370407349615 0.007235107174251133 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 34935 16662 GQWIAETGV True PC9_epitope_Rep6 959.4712458111899 959.47014993586 76.56 2 0.022727075651294032 0.0072547031654838345 0.9438714419765777 ['ENSG00000100211|ENST00000216029|CBY1', 'ENST00000492537.5_1_22:39052727-39067259:+|nuORF'] 25142 11477 FDQAFGLPR True NCI_RA007_Epitope_Rep2 1049.5294293936497 1049.52832993586 49.236 2 0.022716456833400414 0.0072547031654838345 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 31718 8874 GEIRTITVV True NCI_RA007_Epitope_Rep3 986.5760452328999 986.57494993586 41.997 2 0.022711372562056298 0.0072547031654838345 0.9438714419765777 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 100451 22296 SLPEVLPIL True PC9_epitope_Rep4 979.5953836951498 979.5948349679301 94.0 1 0.022707853036255925 0.0072547031654838345 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 8805 21855 AVFPDDMPTL True PC9_epitope_Rep2 1104.51614739828 1104.51557496793 89.541 1 0.022705822151747553 0.0072547031654838345 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 24751 16422 FAYDGKDYL True PC9_epitope_Rep4 1090.4971262058598 1090.49657496793 71.129 1 0.022701440949415487 0.0072547031654838345 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant'] 93764 11134 RTSTGIIGV True PC9_epitope_Rep1 902.5185303567799 902.51742993586 47.711 2 0.022685342758812597 0.0072547031654838345 0.9438714419765777 ['ENST00000543995.5_1_12:6442265-6443279:-|nuORF'] 47421 8905 IYIKQIKTF True NCI_RA007_Epitope_Rep5 1152.6906810623198 1152.68958993586 40.914 2 0.02268383388518153 0.0072547031654838345 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 134410 11462 WTDGSTLQY True H1975_Epitope_Rep3 1069.47163973401 1069.47107496793 49.209 1 0.022678561360464464 0.0072547031654838345 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 73750 6717 NHANGLTL True PC9_epitope_Rep6 838.4297153523801 838.42860993586 34.614 2 0.0226488101403059 0.0072547031654838345 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 8491 12287 ATVEDLPSA True PC9_epitope_Rep4 901.4392769765699 901.43816993586 55.078 2 0.022618412779287864 0.0072547031654838345 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'nc|ENSG00000123159|O14908-2|GIPC1', 'ENST00000585606.5_1_19:14589230-14590349:-|nuORF'] 32452 12405 GGHGPSFPL True PC9_epitope_Rep4 867.42390169595 867.42280993586 55.519 2 0.02260806568125405 0.0072547031654838345 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 17190 15747 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50708496793 65.396 1 0.022587533340952832 0.0072547031654838345 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 102990 18327 SQISDTSVVL True PC9_epitope_Rep3 1047.5448046742702 1047.54427496793 75.704 1 0.022583479249115627 0.0072547031654838345 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 99167 22436 SLAQYLINV True PC9_epitope_Rep1 1019.5651461960299 1019.5645749679301 91.122 1 0.0225600232891749 0.0072547031654838345 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547048.5_1_12:53862529-53873223:+|nuORF'] 40496 14297 HSEVVAIL True PC9_epitope_Rep2 866.4861675993399 866.48506993586 60.259 2 0.02255058411390549 0.0072547031654838345 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 95965 5782 SEAATPPVA True H1975_Epitope_Rep3 841.4181476091699 841.4175949679301 27.267 1 0.02254766961523054 0.0072547031654838345 0.9438714419765777 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 32354 17250 GGDDSFNTF True PC9_epitope_Rep5 958.3668403123 958.36574993586 71.366 2 0.022539420113799613 0.0072547031654838345 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 75623 10449 NQSDTSVSL True PC9_epitope_Rep2 949.43525422529 949.43414993586 45.512 2 0.022510797947556466 0.007273300457114549 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 23092 12744 EVLLSLFDEK True NCI_RA007_Epitope_Rep1 1191.63870505911 1191.6376099358602 53.557 2 0.02250145032686279 0.007273300457114549 0.9438714419765777 ['ENST00000510293.1_1_4:156835507-156839956:+|nuORF', 'ENSG00000151790|ENST00000536354|TDO2'] 126755 8183 VPSGASTGIYE True H1975_Epitope_Rep1 1079.51350454599 1079.51297496793 36.417 1 0.022493291047489025 0.007273300457114549 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000492343.1_1_1:8931941-8934967:-|nuORF', 'ENST00000486051.5_1_1:8930279-8934967:-|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2', 'ENST00000537838.5_1_12:7024996-7025840:+|nuORF', 'ENST00000539713.5_1_12:7024996-7026336:+|nuORF'] 26354 17779 FIGAGAATVGV True PC9_epitope_Rep4 961.5232813840499 961.52218993586 76.416 2 0.02249162567258292 0.007273300457114549 0.9438714419765777 ['ENST00000497075.5_1_2:176043783-176046391:-|nuORF', 'ENST00000513781.5_1_17:46970480-46973128:+|nuORF', 'ENST00000502964.5_1_17:46971694-46973128:+|nuORF', 'ENSG00000159199|ENST00000393366|ATP5MC1', 'ENSG00000135390|ENST00000394349|ATP5MC2', 'ENSG00000154518|ENST00000284727|ATP5MC3', 'nc|ENSG00000135390|Q06055-3|ATP5MC2', 'nc|ENSG00000135390|Q06055-2|ATP5MC2'] 59683 15895 LGTIHLVAV True PC9_epitope_Rep4 921.5647522732099 921.56364993586 69.069 2 0.022485839567324212 0.007273300457114549 0.9438714419765777 ['ENST00000438671.3_1_3:45731844-45750997:+|nuORF'] 21577 5838 ERSGVNSEL True PC9_epitope_Rep1 989.47778774361 989.47668993586 27.27 2 0.022458202597796365 0.007273300457114549 0.9438714419765777 ['ENSG00000124795|ENST00000652689|DEK', 'nc|ENSG00000124795|P35659-2|DEK', 'ENST00000512145.1_1_6:18237336-18256602:-|nuORF'] 140278 5247 YYAKEIHKF True NCI_RA007_Epitope_Rep4 1197.61824439805 1197.6166049037902 26.723 3 0.02245272608849564 0.007273300457114549 0.9438714419765777 ['nc|ENSG00000119699|P10600-2|TGFB3', 'ENSG00000119699|ENST00000238682|TGFB3'] 1263 7873 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 35.23 1 0.02244261963885517 0.007273300457114549 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 103403 9634 SQWVKAHEL True PC9_epitope_Rep5 1096.56654317836 1096.5654499358602 42.021 2 0.022440455678878896 0.007273300457114549 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A', 'ENST00000441989.6_2_7:98935832-98937548:+|nuORF'] 119784 9143 VEVDAAVTP True H1975_Epitope_Rep3 899.4600124211499 899.4594649679301 40.159 1 0.02241818300601965 0.007273300457114549 0.9438714419765777 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 10005 20067 AYTLLGHEF True PC9_epitope_Rep1 1049.51819600361 1049.5170899358602 82.014 2 0.022415633216371814 0.007273300457114549 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF', 'ENST00000425026.1_1_Y:10028050-10028227:-|nuORF'] 16788 7044 EFHLNESGD True H1975_Epitope_Rep3 1046.43050319802 1046.4294099358601 32.059 2 0.022413690712910606 0.007273300457114549 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000514799.1_1_5:59755891-59756539:-|nuORF'] 119709 13208 VETFAFQA True H1975_Epitope_Rep2 911.4388830537499 911.43778993586 55.932 2 0.022402218492479708 0.007273300457114549 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 1276 5155 AEDRQVSITA True H1975_Epitope_Rep2 1088.5462016566 1088.5451099358602 24.906 2 0.02239515029851407 0.007273300457114549 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000571539.1_1_17:2604432-2604736:-|nuORF'] 32120 11656 GEYPATLV True H1975_Epitope_Rep2 848.4279840168799 848.42743496793 49.905 1 0.022331401184246022 0.007273300457114549 0.9438714419765777 ['ENSG00000108256|ENST00000225388|NUFIP2'] 6375 7823 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49492993586 35.035 2 0.02232500417216798 0.007273300457114549 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 41283 20639 IAGPGFINV True PC9_epitope_Rep5 886.49125297978 886.49070496793 84.441 1 0.02231809086390702 0.007273300457114549 0.9438714419765777 ['nc|ENSG00000113643|P54136-2|RARS1', 'ENSG00000113643|ENST00000231572|RARS1', 'ENST00000521939.5_1_5:167913503-167921691:+|nuORF'] 31806 12147 GEMEPPALP True H1975_Epitope_Rep3 939.4371688015898 939.43661496793 51.891 1 0.02230761109764203 0.007273300457114549 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 123314 10548 VHSTNVLL True PC9_epitope_Rep1 881.49706663621 881.49596993586 45.463 2 0.02229386455116258 0.007273300457114549 0.9438714419765777 ['BACH1|p.I569Sfs*11|1|0.53|ENSG00000156273|chr21:29329623-29329624|TT/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 63986 16740 LQAPELANV True PC9_epitope_Rep6 953.5181960036099 953.51708993586 76.88 2 0.022293528471487353 0.007273300457114549 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 34450 8065 GQATNLQRL True PC9_epitope_Rep5 999.5461420869499 999.54504993586 35.959 2 0.022279715170819607 0.007273300457114549 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 5621 6073 APAEEPAAAAA True PC9_epitope_Rep2 967.4610750503098 967.45996993586 28.754 2 0.022233576463196042 0.007273300457114549 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 11498 21328 DGFLSELTQQL True NCI_RA007_Epitope_Rep2 1249.6190322436898 1249.61792993586 88.243 2 0.022232756778043063 0.007273300457114549 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 102456 17514 SPYHGFTIV True PC9_epitope_Rep1 1019.5076313199099 1019.50652993586 72.161 2 0.022224562444471702 0.007273300457114549 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 40224 5751 HRGTGLVL True PC9_epitope_Rep6 851.49773534255 851.49662993586 30.288 2 0.022152045443897986 0.007293026606041507 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 11963 15950 DHTLGNII True PC9_epitope_Rep2 881.46068112749 881.45958993586 66.599 2 0.02214847936961443 0.007293026606041507 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 96880 8357 SESVTEITA True H1975_Epitope_Rep3 935.44475627983 935.44364993586 37.129 2 0.022119186143956554 0.007293026606041507 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 31497 11416 GEEPDIAVP True H1975_Epitope_Rep2 925.4392769765699 925.43872496793 48.962 1 0.022104737370456977 0.007293026606041507 0.9438714419765777 ['ENSG00000185298|ENST00000329214|CCDC137'] 24125 7304 EYSKQMQRF True PC9_epitope_Rep3 1215.57064258263 1215.56899490379 33.101 3 0.02209873225719211 0.007293026606041507 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000463172.5_1_1:32757770-32792715:+|nuORF', 'ENST00000481281.5_1_1:32757770-32793222:+|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 95431 21293 SALEELVNV True PC9_epitope_Rep3 972.5127762699999 972.51166993586 87.198 2 0.022095363374803393 0.007293026606041507 0.9438714419765777 ['ENSG00000162408|ENST00000377705|NOL9'] 70031 19777 LYGPSSVSF True PC9_epitope_Rep2 955.46509780159 955.46400993586 81.459 2 0.02208736723144951 0.007293026606041507 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 132754 13201 VYSNSIYEL True NCI_RA007_Epitope_Rep3 1086.5233409537 1086.52277496793 59.196 1 0.022062013600408433 0.007293026606041507 0.9438714419765777 ['ENST00000509573.5_1_5:138855949-138860944:-|nuORF', 'ENST00000507297.5_1_5:138855848-138858268:-|nuORF', 'ENSG00000184584|ENST00000330794|STING1'] 1919 4898 AEINGTM[Oxidation]NA True H1975_Epitope_Rep3 935.4018463024701 935.40074993586 23.967 2 0.0220309362116721 0.007293026606041507 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 54671 7772 LAEAALELREE True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 34.851 2 0.022026416914302464 0.007293026606041507 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 106792 20719 SYGDILHVI True PC9_epitope_Rep5 1015.53384606775 1015.53274993586 84.753 2 0.022018935302682768 0.007293026606041507 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 88389 20172 QYPHWAVYV True PC9_epitope_Rep3 1161.56072952193 1161.5596299358601 82.848 2 0.022002227173401636 0.007293026606041507 0.9438714419765777 ['ENSG00000168672|ENST00000304916|LRATD2'] 51956 9111 KKVYASFAL True NCI_RA007_Epitope_Rep2 1025.5909670210497 1025.5898699358602 40.045 2 0.021996731403491263 0.007293026606041507 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 84557 9711 QHDDQQPVVL True PC9_epitope_Rep2 1177.5727507576098 1177.57164993586 42.691 2 0.021992501685725356 0.007293026606041507 0.9438714419765777 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3', 'ENST00000512390.1_1_5:141033519-141041645:-|nuORF'] 116492 9278 TYDKGYQF True PC9_epitope_Rep6 1020.45526139388 1020.45416993586 45.844 2 0.02198826452860194 0.007293026606041507 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 5020 21165 ALLEGLTVV True PC9_epitope_Rep4 913.54843350273 913.54788496793 89.574 1 0.021963147830109036 0.007293026606041507 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 9025 18588 AVIGDVIRV True PC9_epitope_Rep1 940.57056592964 940.56946993586 76.286 2 0.021963077755407512 0.007293026606041507 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 4266 21829 AIIPVSGITVV True PC9_epitope_Rep3 1067.65904658087 1067.6579499358602 89.265 2 0.021961402132590523 0.007311586051743532 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 8163 10217 ATFTNVFGK True NCI_RA007_Epitope_Rep4 983.5076313199098 983.50652993586 46.156 2 0.02195388166664107 0.007311586051743532 0.9438714419765777 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 70533 18376 LYTGTVSSF True PC9_epitope_Rep5 973.47566248529 973.47456993586 75.702 2 0.02195215593631759 0.007311586051743532 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 120277 15278 VFPDKGYSF True PC9_epitope_Rep4 1058.5072969667401 1058.5061899358602 66.695 2 0.021940760939488404 0.007311586051743532 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 117832 2620 VAPAPAVVK True NCI_RA007_Epitope_Rep5 850.5276384885 850.52654993586 14.766 2 0.021920612669854986 0.007311586051743532 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF'] 1793 10037 AEIASSLPAA True H1975_Epitope_Rep3 928.48656152216 928.48546993586 43.643 2 0.021902887681857115 0.007311586051743532 0.9438714419765777 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-2|TMEM131L'] 90344 15802 RIIDVVYNA True PC9_epitope_Rep2 1061.58694426977 1061.58637496793 66.042 1 0.02189303581621131 0.007311586051743532 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 24781 17852 FAYGGWNYL True H1975_Epitope_Rep2 1089.4919812557698 1089.4908899358602 73.989 2 0.021875345920223107 0.007311586051743532 0.9438714419765777 ['ENSG00000103257|ENST00000261622|SLC7A5'] 2658 6491 AETAAVTVA True H1975_Epitope_Rep3 831.43379767331 831.43324496793 29.937 1 0.021859401042717226 0.007311586051743532 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 64103 13295 LQEDPPVGV True PC9_epitope_Rep4 952.4865615221598 952.48546993586 59.035 2 0.021859279376982125 0.007311586051743532 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 40225 5827 HRGTGLVL True PC9_epitope_Rep6 851.49773534255 851.49662993586 30.628 2 0.021851519462618776 0.007311586051743532 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 132730 5874 VYSHVIQKL True NCI_RA007_Epitope_Rep3 1085.62332977849 1085.62222993586 30.083 2 0.02184113081609672 0.007311586051743532 0.9438714419765777 ['ENSG00000135094|ENST00000257549|SDS'] 71068 5513 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep2 849.3902189896098 849.38912993586 26.218 2 0.02181017370947585 0.007311586051743532 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 47914 22775 IYVPVSLGF True PC9_epitope_Rep3 993.55351888317 993.55242993586 92.873 2 0.02177837175494207 0.007311586051743532 0.9438714419765777 ['ENSG00000172818|ENST00000335987|OVOL1'] 96383 9106 SEHGLVVIA True NCI_RA007_Epitope_Rep4 923.5076313199099 923.50652993586 41.866 2 0.021771958069146776 0.007311586051743532 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 27838 19639 FQLEHIM[Oxidation]DL True PC9_epitope_Rep3 1160.5535959166 1160.5524899358602 80.778 2 0.021771602546292707 0.007311586051743532 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 8725 14277 AVDPGLLGY True H1975_Epitope_Rep2 903.47018318203 903.46963496793 60.066 1 0.02176506335240529 0.007311586051743532 0.9438714419765777 ['ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1'] 45308 12850 ISARTTSII True PC9_epitope_Rep4 960.56039516876 960.55928993586 57.293 2 0.021763768016782054 0.007311586051743532 0.9438714419765777 ['ENSG00000215182|ENST00000621226|MUC5AC'] 71088 6259 METAAAVAA True NCI_RA007_Epitope_Rep3 833.3953039896098 833.39420993586 31.622 2 0.021761439101403365 0.007311586051743532 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 129489 21320 VTEVELLLY True H1975_Epitope_Rep1 1077.5957776179698 1077.59468993586 88.568 2 0.021751142402864156 0.007311586051743532 0.9438714419765777 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574', 'ZNF574|p.Q224Sfs*144|1|0.3|ENSG00000105732|chr19:42079275-42079275|C/-|frameshift_variant'] 53687 14613 KYAMMFAEL True NCI_RA007_Epitope_Rep4 1102.51912460374 1102.51802993586 63.6 2 0.021731069981742138 0.007311586051743532 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 72762 7433 NADPQAVTM True NCI_RA007_Epitope_Rep4 945.42258136661 945.42148993586 35.235 2 0.02169977952672754 0.007311586051743532 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 91861 8846 RPNPPPVSV True PC9_epitope_Rep3 961.53451477409 961.53340993586 38.978 2 0.021673624437269324 0.007311586051743532 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 70354 22381 LYPSIIQEF True PC9_epitope_Rep3 1108.580461907 1108.57936993586 91.366 2 0.021673031490959078 0.007311586051743532 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 120351 17189 VFQFLNAK True PC9_epitope_Rep3 965.5334521449298 965.53234993586 71.274 2 0.021625465852135893 0.007356249437595609 0.9438714419765777 ['RPL24-SLC9A9|1|fusion', 'ENSG00000114391|ENST00000394077|RPL24'] 2697 11378 AETFDAVVA True H1975_Epitope_Rep2 921.4443623570098 921.44381496793 48.814 1 0.021592003358684803 0.007356249437595609 0.9438714419765777 ['ENSG00000132423|ENST00000254759|COQ3'] 107413 18758 SYTSGLETL True PC9_epitope_Rep3 969.4654917244101 969.46438993586 77.373 2 0.02157292483768648 0.007377915738803788 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 4634 13030 ALASHLIEA True PC9_epitope_Rep1 923.5076313199099 923.50652993586 54.989 2 0.02156539868961953 0.007377915738803788 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 139319 18162 YTDQAFFSF True H1975_Epitope_Rep2 1124.48147614172 1124.4803699358602 75.274 2 0.021559075418585327 0.007377915738803788 0.9438714419765777 ['ENSG00000169359|ENST00000643144|SLC33A1', 'chr3:155829755-155829856|411|14.03|0.8|4.13|-|ENST00000644855|SLC33A1,SLC33A1'] 76234 10649 NSATGVPTV True PC9_epitope_Rep2 844.42904664604 844.4284949679301 46.274 1 0.02155513836431686 0.007377915738803788 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 28509 14157 FSGPAITL True H1975_Epitope_Rep1 804.43815477776 804.43760496793 59.63 1 0.02154567833309221 0.007377915738803788 0.9438714419765777 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 86653 14999 QRGPPIIL True PC9_epitope_Rep1 892.5494365622399 892.54832993586 62.514 2 0.021531828226579626 0.007399077926459012 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 26343 12901 FIFSDTHEL True NCI_RA007_Epitope_Rep5 1107.52367530687 1107.52256993586 56.306 2 0.021529328111452726 0.007399077926459012 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 49372 17025 KIIDIFTTL True NCI_RA007_Epitope_Rep4 1062.6324974798601 1062.6314099358601 73.77 2 0.02152790733256339 0.007399077926459012 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant', 'DNAH5|p.A481T|1|0.13|ENSG00000039139|chr5:13913838-13913838|C/T|missense_variant'] 42686 13008 IEVPTSFSA True H1975_Epitope_Rep3 949.47566248529 949.47511496793 55.27 1 0.021489842465451946 0.007399077926459012 0.9438714419765777 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant'] 35621 6848 GTLMWHQMK True NCI_RA007_Epitope_Rep3 1130.5365060033798 1130.53486490379 34.049 3 0.021487624636562785 0.007399077926459012 0.9438714419765777 ['ENST00000352767.7_2_3:184032446-184033585:+|nuORF', 'ENST00000346169.6_1_3:184032401-184033585:+|nuORF'] 101636 16886 SPFGTITSA True PC9_epitope_Rep5 879.43379767331 879.43324496793 69.964 1 0.02147120624651499 0.007399077926459012 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 40186 8725 HRFPTVAV True PC9_epitope_Rep6 925.5133854066898 925.5122899358599 43.424 2 0.021447126575572035 0.007399077926459012 0.9438714419765777 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588167.1_1_18:12009921-12028151:+|nuORF'] 52346 9973 KPFGQVIST True PC9_epitope_Rep4 975.5389314481899 975.53782993586 46.022 2 0.02143299425481851 0.007399077926459012 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000552228.1_1_12:56965526-56975322:+|nuORF', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 5620 5981 APAEEPAAAAA True PC9_epitope_Rep2 967.4610750503098 967.45996993586 28.393 2 0.021419049768647037 0.007420899952776091 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 6346 7503 APRQPGLM[Oxidation]A True PC9_epitope_Rep5 955.4909360903898 955.48982993586 33.811 2 0.021397044411378525 0.007420899952776091 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 40226 5901 HRGTGLVL True PC9_epitope_Rep6 851.49773534255 851.49662993586 30.965 2 0.021383374888068896 0.007420899952776091 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 32947 9605 GISDVFAK True NCI_RA007_Epitope_Rep1 835.44396843419 835.44286993586 41.359 2 0.021375436881394354 0.007420899952776091 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 126994 13199 VPWMPPGKSSA True PC9_epitope_Rep3 1155.57466533391 1155.5735699358602 55.807 2 0.021337916759618113 0.007442383361439011 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 100590 22257 SLQFIPILI True PC9_epitope_Rep4 1042.6426682407398 1042.6415699358602 93.851 2 0.021336962112896117 0.007442383361439011 0.9438714419765777 ['ENSG00000260286|ENST00000565469|ARMH2'] 115916 15260 TVPKPDVVVQV True PC9_epitope_Rep1 1179.68632395787 1179.6852299358602 63.518 2 0.021328722563113637 0.007442383361439011 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 41142 17995 HYPPVQVLF True PC9_epitope_Rep6 1098.58621599378 1098.5851099358601 81.846 2 0.02132496987809549 0.007442383361439011 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 47901 21451 IYVISAETF True PC9_epitope_Rep1 1041.53826274185 1041.5371699358602 87.351 2 0.02129372624788968 0.007442383361439011 0.9438714419765777 ['ENSG00000116459|ENST00000369722|ATP5PB'] 126038 12995 VPAPSPLSA True PC9_epitope_Rep2 837.45961849833 837.45852993586 55.272 2 0.02129259136247936 0.007442383361439011 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 118905 5210 VEEPSNPEA True H1975_Epitope_Rep3 970.4243551884199 970.42324993586 25.128 2 0.021288766955706938 0.007464196587153488 0.9438714419765777 ['nc|ENSG00000171862|P60484-2|PTEN', 'PAPSS2-PTEN|1|fusion', 'ENSG00000171862|ENST00000371953|PTEN', 'ENST00000532280.1_1_9:33675440-33676694:-|nuORF'] 35880 21208 GVAETLVLV True PC9_epitope_Rep2 899.5327834385898 899.5322349679301 87.034 1 0.021284884738412807 0.007464196587153488 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 17250 18965 EHAPSIIFM True PC9_epitope_Rep4 1043.5110024481899 1043.5099099358602 81.039 2 0.02127365141030181 0.007464196587153488 0.9438714419765777 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 91767 8752 RPKPSSSPVIF True PC9_epitope_Rep4 1213.68190728377 1213.68025490379 41.17 3 0.0212483475796575 0.007464196587153488 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 65752 22276 LSIEQLTTL True PC9_epitope_Rep3 1016.5753765265599 1016.57426993586 90.97 2 0.021217537032499248 0.007484996291218054 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 86747 6320 QRLETQVSA True PC9_epitope_Rep1 1030.5407223533398 1030.5396299358601 29.122 2 0.021195904731060165 0.007484996291218054 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 46783 12523 IVDEAIYY True H1975_Epitope_Rep2 984.4804135125601 984.4798649679301 53.263 1 0.02119449834556356 0.007484996291218054 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 64101 14233 LQEDPPVGV True PC9_epitope_Rep3 952.4865615221598 952.48546993586 59.833 2 0.021178125780235278 0.007484996291218054 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 31312 5889 GEAAGSPVP True H1975_Epitope_Rep3 783.37628279719 783.37573496793 27.661 1 0.021165250747765027 0.007484996291218054 0.9438714419765777 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 84909 7632 QHSTAQLNL True PC9_epitope_Rep4 1010.5145076055 1010.51340993586 36.736 2 0.02115304289063238 0.007484996291218054 0.9438714419765777 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 107389 11769 SYSSTFHSL True PC9_epitope_Rep2 1027.46107505031 1027.45996993586 50.601 2 0.021143441620301663 0.007484996291218054 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 68257 10661 LTREENTAI True PC9_epitope_Rep5 1045.54038800017 1045.53928993586 45.996 2 0.021142769942273983 0.007484996291218054 0.9438714419765777 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant', 'BRCA2|p.R2034H|2|0.21|ENSG00000139618|chr13:32340456-32340456|G/A|missense_variant'] 48916 6549 KEVLVPEA True NCI_RA007_Epitope_Rep3 883.5014833103099 883.50038993586 32.807 2 0.02114041629836008 0.007484996291218054 0.9438714419765777 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-4|NISCH', 'nc|ENSG00000010322|Q9Y2I1-3|NISCH'] 72490 10660 M[Oxidation]VAPAVASV True PC9_epitope_Rep6 859.4473399429099 859.44624993586 51.822 2 0.021140327106680006 0.007484996291218054 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 132582 20362 VYPNWAIGL True PC9_epitope_Rep6 1031.5440168286298 1031.54290993586 91.02 2 0.021135872676335862 0.007504268895479465 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 6826 18595 AQIDGTLSTI True PC9_epitope_Rep1 1017.5342399905701 1017.5336749679301 76.313 1 0.021122193404577334 0.007504268895479465 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 127326 6284 VQNGKVIGV True PC9_epitope_Rep2 912.5392658013598 912.53816993586 29.568 2 0.021075241970874594 0.007504268895479465 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 102960 22151 SQIPFPLSL True PC9_epitope_Rep4 1000.5593325396 1000.55877496793 93.424 1 0.021044523971062715 0.007504268895479465 0.9438714419765777 ['ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 34469 20198 GQDGLYIGV True PC9_epitope_Rep1 920.4603467743199 920.45924993586 82.52 2 0.021036307155431592 0.007504268895479465 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 139836 5991 YVDGVEVHNA True NCI_RA007_Epitope_Rep4 1101.50908787189 1101.50798993586 29.662 2 0.021028783986057727 0.007504268895479465 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 96205 11791 SEEILTVAA True H1975_Epitope_Rep2 931.4862271689899 931.48512993586 50.428 2 0.021026531639410012 0.007504268895479465 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 67375 14379 LTDTFTAYY True H1975_Epitope_Rep2 1093.49679185269 1093.49627496793 60.459 1 0.021015227621691314 0.007504268895479465 0.9438714419765777 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 56900 9816 LEDPSQLPP True H1975_Epitope_Rep2 994.49712620586 994.49602993586 42.741 2 0.021014548226985327 0.007504268895479465 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 62894 22297 LMSLIINTF True PC9_epitope_Rep4 1050.57835373202 1050.5772499358602 94.004 2 0.021012636748131235 0.007504268895479465 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 75765 4934 NRAPNTAEL True PC9_epitope_Rep2 984.4988575413599 984.49776993586 24.342 2 0.02101260581496886 0.007504268895479465 0.9438714419765777 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA', 'ENSG00000162924|ENST00000394479|REL', 'REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 137916 21918 YPPVQVLF True PC9_epitope_Rep2 961.5273041353298 961.52620993586 89.784 2 0.021010941650409603 0.007504268895479465 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 100652 5563 SLQSVAEER True NCI_RA007_Epitope_Rep4 1017.5090878718898 1017.50798993586 28.0 2 0.02100630506698506 0.007504268895479465 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15', 'ENST00000490223.1_1_3:23959920-23960989:+|nuORF', 'ENST00000436146.1_1_3:23959450-23960989:+|nuORF'] 86258 13983 QQAALLLA True NCI_RA007_Epitope_Rep4 826.4912529797799 826.49070496793 61.057 1 0.021003740944129067 0.007504268895479465 0.9438714419765777 ['ENSG00000152382|ENST00000367874|TADA1'] 126168 11938 VPFQNAATA True PC9_epitope_Rep5 917.4606811274898 917.45958993586 50.917 2 0.02099676339540395 0.007504268895479465 0.9438714419765777 ['nc|ENSG00000182831|Q14CZ0-2|HAPSTR1', 'ENSG00000182831|ENST00000327827|HAPSTR1'] 1097 7700 AEAPPAYTP True H1975_Epitope_Rep3 915.4337976733101 915.43324496793 34.599 1 0.02098805275758934 0.007504268895479465 0.9438714419765777 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 64438 17724 LQSDRVLYL True PC9_epitope_Rep3 1105.6131590176099 1105.61206993586 73.372 2 0.0209878692236041 0.007504268895479465 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4'] 40029 10468 HQVKIGDFGL True NCI_RA007_Epitope_Rep3 1112.5978433066398 1112.59674993586 48.24 2 0.020986895267178205 0.007504268895479465 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 89454 4451 REQEAREPVL True H1975_Epitope_Rep3 1225.6414990237697 1225.6398449037902 22.243 3 0.020971299712498153 0.007504268895479465 0.9438714419765777 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000572067.1_1_16:67916382-67916877:+|nuORF'] 30487 13788 GAGPSLLL True H1975_Epitope_Rep1 726.4275900940601 726.4270449679301 58.179 1 0.020923658132896508 0.007523694021470601 0.9438714419765777 ['ENSG00000109861|ENST00000227266|CTSC', 'ENST00000533865.5_1_11:88068232-88070840:-|nuORF', 'ENST00000534131.1_1_11:88068041-88070840:-|nuORF', 'nc|ENSG00000109861|P53634-2|CTSC', 'nc|ENSG00000109861|P53634-3|CTSC', 'ENST00000393301.4_1_11:88059607-88070840:-|nuORF'] 4948 11779 ALIARVTNV True PC9_epitope_Rep4 955.58146496651 955.58036993586 53.074 2 0.020871474433000213 0.007523694021470601 0.9438714419765777 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD', 'nc|ENSG00000103490|Q9ULZ3-3|PYCARD', 'ENST00000565022.1_1_16:31212908-31213633:-|nuORF'] 25055 14446 FDDPGLM[Oxidation]L True H1975_Epitope_Rep3 922.4106200810199 922.4100749679301 60.923 1 0.020859011809507808 0.007523694021470601 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 140694 8004 YYQDTPKQI True PC9_epitope_Rep4 1154.5607890915799 1154.5596899358602 38.237 2 0.020854429941414444 0.007523694021470601 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 69052 22097 LVIGQFLEA True PC9_epitope_Rep2 988.5593325395998 988.55822993586 90.468 2 0.02084165568718935 0.007523694021470601 0.9438714419765777 ['ENST00000596386.1_1_19:40477100-40485896:+|nuORF', 'ENST00000593455.5_1_19:40477100-40486089:+|nuORF', 'nc|ENSG00000013275|P43686-2|PSMC4', 'ENSG00000013275|ENST00000157812|PSMC4', 'ENST00000601697.5_1_19:40477100-40486546:+|nuORF'] 31802 12406 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43661496793 52.805 1 0.020819431161930937 0.007523694021470601 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 129330 9271 VTDSTQVNV True PC9_epitope_Rep1 961.47163973401 961.47054993586 40.513 2 0.020816886281662044 0.007523694021470601 0.9438714419765777 ['ENST00000420642.1_7:74765936-74789271:+|nuORF', 'nc|ENSG00000274523|Q96I51-3|RCC1L', 'ENSG00000274523|ENST00000610322|RCC1L', 'nc|ENSG00000274523|Q96I51-2|RCC1L'] 116439 20540 TWTEVSYTF True PC9_epitope_Rep4 1132.5076908895599 1132.5065899358601 87.157 2 0.020815583915064627 0.007523694021470601 0.9438714419765777 ['ENSG00000116663|ENST00000376753|FBXO6'] 119660 8305 VESPESLAA True H1975_Epitope_Rep1 901.4392769765699 901.43816993586 36.877 2 0.02078944372412514 0.007523694021470601 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 135065 23658 YALDLSTFL True PC9_epitope_Rep3 1041.53826274185 1041.5371699358602 96.286 2 0.02078333121668888 0.007523694021470601 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 74970 21393 NLVPMIIHL True PC9_epitope_Rep2 1048.61032256664 1048.6092299358602 87.759 2 0.020782725097223696 0.007523694021470601 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4'] 105320 9633 STVEKLYAA True PC9_epitope_Rep5 980.5178616504397 980.51676993586 42.018 2 0.02077660148708323 0.007523694021470601 0.9438714419765777 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 70270 13812 LYNPKITSEL True PC9_epitope_Rep6 1176.63903941228 1176.6379499358602 64.932 2 0.02077603090833649 0.007523694021470601 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 55904 23205 LDGLYLLTL True PC9_epitope_Rep5 1019.5902983147099 1019.5897749679301 94.239 1 0.020750239249522302 0.007523694021470601 0.9438714419765777 ['ENST00000590435.5_1_17:74559537-74560081:+|nuORF'] 29413 21778 FVFPGELLL True NCI_RA007_Epitope_Rep5 1033.5848190114498 1033.5837299358602 90.892 2 0.020707695436337725 0.007523694021470601 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 89548 3620 RERRDNYVP True NCI_RA007_Epitope_Rep4 1203.6108676018298 1203.60922490379 19.992 3 0.020692973277995574 0.007523694021470601 0.9438714419765777 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 37775 5724 HAYDGKDYI True NCI_RA007_Epitope_Rep5 1080.48762415132 1080.48652993586 28.705 2 0.02068772564831561 0.007523694021470601 0.9438714419765777 ['ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'nc|ENSG00000206341|P01893|HLA-H'] 20465 4392 EPSEVPTPK True NCI_RA007_Epitope_Rep5 982.4971262058599 982.49602993586 23.521 2 0.020659096472154193 0.007523694021470601 0.9438714419765777 ['ENST00000430198.2_1_4:73964637-73964859:+|nuORF', 'nc|ENSG00000137309|P17096-2|HMGA1', 'ENSG00000137309|ENST00000311487|HMGA1', 'nc|ENSG00000137309|P17096-3|HMGA1'] 118347 8057 VDFNVPM[Oxidation]K True NCI_RA007_Epitope_Rep1 964.4688036634799 964.46770993586 35.336 2 0.02061085542446422 0.00754395024585195 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 113527 8104 TQTGVVQHL True PC9_epitope_Rep1 981.5243440132099 981.52324993586 35.998 2 0.020575653102522753 0.00754395024585195 0.9438714419765777 ['RASA2-ACPL2|1|fusion', 'nc|ENSG00000155893|Q8TE99-2|PXYLP1', 'ENSG00000155893|ENST00000286353|PXYLP1', 'PXYLP1|p.L165V|2|0.15|ENSG00000155893|chr3:141287441-141287441|C/G|missense_variant'] 67027 20325 LTAPALALA True PC9_epitope_Rep3 839.5116540711899 839.51110496793 83.43 1 0.020574849899550232 0.00754395024585195 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 21494 16852 ERQRWLVAL True PC9_epitope_Rep2 1169.6669259259697 1169.66527490379 70.07 3 0.020552273171156703 0.00754395024585195 0.9438714419765777 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3', 'ENST00000498106.1_1_7:30085848-30088836:+|nuORF', 'nc|ENSG00000106086|Q96JA3-3|PLEKHA8', 'nc|ENSG00000106086|Q96JA3-2|PLEKHA8', 'ENSG00000106086|ENST00000449726|PLEKHA8'] 102053 8341 SPPPPPPPP True PC9_epitope_Rep2 881.4647038787699 881.46360993586 37.454 2 0.020532170142656427 0.00754395024585195 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 31957 6080 GESNRLLSA True NCI_RA007_Epitope_Rep4 945.4879585044899 945.48686993586 30.003 2 0.020524087013392065 0.00754395024585195 0.9438714419765777 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'nc|ENSG00000138698|P52306-6|RAP1GDS1'] 76061 12656 NRLPDGMAV True PC9_epitope_Rep3 971.48585032951 971.48474993586 53.706 2 0.020522545698898775 0.00754395024585195 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 35095 11195 GRPGQLSL True PC9_epitope_Rep3 826.4661008611 826.4650099358599 48.066 2 0.02051396324390764 0.00754395024585195 0.9438714419765777 ['ENST00000609803.2_1_12:46121133-46121556:-|nuORF'] 76255 17038 NSDLNNLLF True H1975_Epitope_Rep3 1048.5189242796 1048.5178299358602 71.133 2 0.020508470102870883 0.00754395024585195 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 128325 11845 VSDGIIAPGY True H1975_Epitope_Rep3 990.5022115862998 990.5016649679301 50.71 1 0.020504162568747535 0.00754395024585195 0.9438714419765777 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000446622.5_1_2:216199652-216212358:+|nuORF'] 40340 12604 HRTDLNPIL True PC9_epitope_Rep5 1077.59309227937 1077.59198993586 53.481 2 0.02047835364910696 0.00754395024585195 0.9438714419765777 ['ENST00000498316.3_1_7:28857752-28858893:+|nuORF', 'nc|ENSG00000146592|Q02930-4|CREB5', 'nc|ENSG00000146592|Q02930-3|CREB5', 'nc|ENSG00000146592|Q02930-2|CREB5', 'ENSG00000146592|ENST00000357727|CREB5'] 94476 20465 RYGNTPFLF True PC9_epitope_Rep3 1113.56072952193 1113.5596299358601 83.975 2 0.020460604922011728 0.00754395024585195 0.9438714419765777 ['ENSG00000188419|ENST00000357749|CHM'] 83123 19372 PYPPPPPEF True PC9_epitope_Rep5 1039.5014833103098 1039.50038993586 79.561 2 0.020456869894478123 0.00754395024585195 0.9438714419765777 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 95523 10205 SAQGSDVSLTA True PC9_epitope_Rep1 1034.48801807414 1034.4869299358602 44.132 2 0.020415882733973 0.00756521348718179 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000383620.4_1_6:29857122-29858256:+|nuORF', 'ENST00000497377.5_1_6:31322262-31322491:-|nuORF', 'ENST00000496081.5_1_6:29912792-29913229:+|nuORF', 'ENST00000481849.5_1_6:31322262-31322472:-|nuORF', 'ENSG00000234745|ENST00000412585|HLA-B', 'nc|ENSG00000206341|P01893|HLA-H', 'ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 9914 12019 AYPHNLMTF True NCI_RA007_Epitope_Rep5 1092.50625142092 1092.5051499358601 52.89 2 0.02040878900828808 0.00756521348718179 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 14030 4726 DSAPSPPPP True H1975_Epitope_Rep3 863.40249754503 863.40140993586 23.305 2 0.02039787984285772 0.00756521348718179 0.9438714419765777 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 127576 21426 VQWENSFVSV True PC9_epitope_Rep5 1193.57168812845 1193.57117496793 87.478 1 0.02039342769232288 0.00756521348718179 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 110215 20893 TIEDGIFEV True PC9_epitope_Rep4 1021.4967918526899 1021.49627496793 88.523 1 0.02039103259898118 0.00756521348718179 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 108413 5638 TEEDTPLKP True H1975_Epitope_Rep3 1028.5026055091198 1028.5015099358602 26.724 2 0.02038356675274872 0.00756521348718179 0.9438714419765777 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4'] 97636 7509 SHANSAVVL True PC9_epitope_Rep5 896.47158016436 896.4710349679301 33.834 1 0.02037108982206959 0.00756521348718179 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 16048 9276 EEALPVTTA True H1975_Epitope_Rep3 929.47057710485 929.46948993586 40.674 2 0.020313161080735716 0.007585448506474562 0.9438714419765777 ['ENSG00000184897|ENST00000333762|H1-10'] 94219 8461 RWPKKSAEF True PC9_epitope_Rep5 1147.61382772395 1147.61218490379 37.488 3 0.02028880062492885 0.007585448506474562 0.9438714419765777 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 102354 5643 SPVFTSRSAA True PC9_epitope_Rep4 1021.51925863277 1021.51816993586 28.502 2 0.02028553071041552 0.007585448506474562 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 53646 16793 KWNPTAGVAF True PC9_epitope_Rep4 1089.56072952193 1089.56017496793 72.565 1 0.020240847409173923 0.007585448506474562 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 27049 19347 FLNRAEDYTL True PC9_epitope_Rep1 1240.6088019131598 1240.6077099358602 79.223 2 0.02023761144197572 0.007585448506474562 0.9438714419765777 ['ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 89247 7466 REKMFVEEV True NCI_RA007_Epitope_Rep3 1165.58014463717 1165.5790499358602 36.487 2 0.020233466162967964 0.007585448506474562 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 73754 7192 NHAPSVQI True PC9_epitope_Rep2 864.44536541652 864.44426993586 33.056 2 0.020229827732374816 0.007585448506474562 0.9438714419765777 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 7 5245 AAAAAAAAAAA True PC9_epitope_Rep4 799.41881631551 799.41770993586 26.874 2 0.02021772431886021 0.007585448506474562 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 1435 6183 AEEHAPSIV True H1975_Epitope_Rep2 951.4661604307499 951.46506993586 28.753 2 0.020210465049500723 0.007585448506474562 0.9438714419765777 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000555787.1_1_14:90734518-90735894:+|nuORF'] 84945 20824 QHWPVFVEV True PC9_epitope_Rep1 1139.5763795860698 1139.5752899358602 84.928 2 0.020203797931535927 0.007585448506474562 0.9438714419765777 ['nc|ENSG00000114544|Q96GZ6-6|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-7|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-5|SLC41A3', 'ENSG00000114544|ENST00000360370|SLC41A3', 'nc|ENSG00000114544|Q96GZ6-2|SLC41A3', 'nc|ENSG00000114544|Q96GZ6|SLC41A3'] 45969 4335 ISSSSFSR True NCI_RA007_Epitope_Rep5 869.42429561877 869.42318993586 23.279 2 0.0201992719854305 0.007585448506474562 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 109525 7286 THAGAHLDL True PC9_epitope_Rep5 933.4668291370899 933.4657299358599 32.99 2 0.020198105436733716 0.007585448506474562 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3470835-3470958:-|nuORF'] 136325 8780 YHADIYDKV True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 39.127 2 0.020178014304273434 0.007585448506474562 0.9438714419765777 ['nc|ENSG00000054148|Q9NRX4-2|PHPT1', 'ENSG00000054148|ENST00000247665|PHPT1', 'ENST00000492540.5_1_9:139743852-139744679:+|nuORF'] 8638 7191 AVAPAGILK True NCI_RA007_Epitope_Rep5 838.5276384885 838.52654993586 34.339 2 0.02014759795682219 0.007604989231873654 0.9438714419765777 ['nc|ENSG00000186994|Q6NY19-1|KANK3', 'ENSG00000186994|ENST00000330915|KANK3', 'ENST00000593331.1_1_19:8399202-8399642:-|nuORF'] 107012 16826 SYLKQLPHF True PC9_epitope_Rep5 1131.6076797143498 1131.60658993586 69.731 2 0.020140629456130772 0.007604989231873654 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 21147 8427 ERDSTEVEI True PC9_epitope_Rep2 1076.49858275784 1076.4974899358601 37.784 2 0.020139025867457465 0.007604989231873654 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'nc|ENSG00000116641|Q96N67-7|DOCK7'] 34610 11021 GQIAGSTGL True PC9_epitope_Rep1 802.41848196234 802.41793496793 47.28 1 0.020132041110276246 0.007604989231873654 0.9438714419765777 ['ENSG00000102243|ENST00000370634|VGLL1'] 27627 18379 FQADGTYTL True PC9_epitope_Rep5 1014.4658260775799 1014.46472993586 75.713 2 0.020114818298930727 0.007604989231873654 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3', 'nc|ENSG00000108344|O43242-2|PSMD3', 'ENST00000415039.7_1_17:38140716-38152959:+|nuORF', 'ENST00000485835.1_1_17:38151035-38151804:+|nuORF', 'THRA-PSMD3|1|fusion'] 40890 19901 HVPSTDLILNV True PC9_epitope_Rep1 1206.66083748602 1206.6597499358602 81.367 2 0.020108344558733574 0.007604989231873654 0.9438714419765777 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'nc|ENSG00000155034|Q96ME1-3|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 31358 5041 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.3913849679301 24.472 1 0.020104104678898903 0.007604989231873654 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 116681 13665 TYISRSFQV True PC9_epitope_Rep4 1099.56620882519 1099.5651099358602 60.454 2 0.020088409046009774 0.007604989231873654 0.9438714419765777 ['ENSG00000154127|ENST00000284273|UBASH3B'] 3855 14828 AHAPATLML True PC9_epitope_Rep5 923.4898730807901 923.48876993586 62.035 2 0.020058982565795132 0.007604989231873654 0.9438714419765777 ['ENST00000588498.1_1_19:10506000-10506648:-|nuORF'] 70828 4280 M[Oxidation]EERAQLEA True H1975_Epitope_Rep2 1091.4917239360298 1091.4906299358602 21.577 2 0.02004497989989888 0.007604989231873654 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2'] 90413 17548 RIPAYFVTV True PC9_epitope_Rep6 1064.60186605792 1064.6007699358602 80.138 2 0.020032571619151243 0.007604989231873654 0.9438714419765777 ['ENSG00000204394|ENST00000375663|VARS1', 'ENST00000461874.1_1_6:31749609-31749932:-|nuORF', 'ENST00000483275.1_1_6:31749724-31750195:-|nuORF'] 130564 21234 VTYPGELLL True PC9_epitope_Rep4 1003.5589981864299 1003.55847496793 89.84 1 0.02002170228544007 0.007604989231873654 0.9438714419765777 ['ENSG00000146386|ENST00000367660|ABRACL'] 104796 8161 STDPSVLGKY True H1975_Epitope_Rep2 1065.5342399905699 1065.5331499358601 36.341 2 0.020018692811320682 0.007604989231873654 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 57737 7736 LENMPSAEA True H1975_Epitope_Rep2 960.4222470134399 960.42114993586 34.709 2 0.020005017305823377 0.007604989231873654 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 111341 21905 TLIEDILGV True PC9_epitope_Rep6 971.5539128059899 971.5533649679301 97.16 1 0.019995099068955163 0.007604989231873654 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 63859 9003 LPTTNSGVSA True PC9_epitope_Rep3 945.47672511445 945.47562993586 39.575 2 0.01992999402685202 0.007604989231873654 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 41988 5655 IEDINDHTP True H1975_Epitope_Rep2 1052.4774533904401 1052.47634993586 26.749 2 0.019928041492783065 0.007604989231873654 0.9438714419765777 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB4|p.A557Gfs*30|1|0.19|ENSG00000253953|chr5:141389554-141389554|C/-|frameshift_variant', 'PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 68583 21852 LTYGTMVFV True PC9_epitope_Rep2 1029.5205045027299 1029.51940993586 89.528 2 0.019897553889796298 0.0076246860423394335 0.9438714419765777 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'nc|ENSG00000161533|Q15067|ACOX1', 'ENST00000589744.1_1_17:73949530-73951667:-|nuORF'] 46492 19980 ITPENLPQI True PC9_epitope_Rep3 1023.5600608155898 1023.5589699358601 82.098 2 0.01988637501369781 0.0076246860423394335 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 119937 9766 VEYEVPEA True H1975_Epitope_Rep1 934.4283779396998 934.4278249679301 42.496 1 0.01988267893605289 0.0076246860423394335 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 103599 15208 SRDKTIIM[Oxidation]W True PC9_epitope_Rep5 1164.59612943492 1164.59449490379 63.506 3 0.019878737198626067 0.0076246860423394335 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 97035 15644 SEWDGIVTV True NCI_RA007_Epitope_Rep5 1004.4814761417199 1004.48036993586 66.882 2 0.019867530319954013 0.0076246860423394335 0.9438714419765777 ['nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 37673 14433 HAIPPTLAM True PC9_epitope_Rep5 949.5055231449301 949.50442993586 60.516 2 0.019867162549327418 0.0076246860423394335 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 5185 15677 ALPGLLHA True PC9_epitope_Rep5 790.47012361238 790.46902993586 65.313 2 0.019864479139923237 0.0076246860423394335 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 118113 21471 VAVAGLLTV True PC9_epitope_Rep1 841.52730413533 841.5267549679301 87.429 1 0.019761651477168976 0.0076246860423394335 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 34837 9415 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42828993586 41.072 2 0.0197565202942514 0.0076246860423394335 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 55153 6976 LANGQTKVL True PC9_epitope_Rep5 942.5498304850599 942.54872993586 31.801 2 0.019742222077639218 0.0076246860423394335 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP', 'ENST00000488537.1_1_1:145440216-145440639:+|nuORF'] 53816 15873 KYFLWVVKF True NCI_RA007_Epitope_Rep4 1228.7008518231999 1228.6997499358602 68.924 2 0.019730397281387358 0.0076246860423394335 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 28871 13142 FTDTSLMY True H1975_Epitope_Rep1 976.42118438428 976.42063496793 55.644 1 0.01971453495763769 0.0076246860423394335 0.9438714419765777 ['nc|ENSG00000177426|Q15583-4|TGIF1', 'ENSG00000177426|ENST00000343820|TGIF1', 'nc|ENSG00000177426|Q15583-3|TGIF1', 'nc|ENSG00000177426|Q15583|TGIF1'] 1695 5584 AEGPPTNPP True H1975_Epitope_Rep2 878.4133965819 878.41228993586 26.483 2 0.019714279574507627 0.0076246860423394335 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 19696 6406 ELSEQIQR True PC9_epitope_Rep1 1001.51417325233 1001.51306993586 29.449 2 0.019691616197493073 0.0076246860423394335 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 101763 6339 SPHPPSEVTA True PC9_epitope_Rep1 1020.48762415132 1020.48652993586 29.194 2 0.019689227532504735 0.0076246860423394335 0.9438714419765777 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 72030 18102 MQMSPALTC True PC9_epitope_Rep5 980.4129452830399 980.41184993586 74.64 2 0.0196867220522715 0.0076246860423394335 0.9438714419765777 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 76420 13595 NSTFSEIFKK True PC9_epitope_Rep3 1199.6186383208699 1199.61700490379 57.355 3 0.019665087801763608 0.007641114123736751 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 6226 4619 APRGPGTVPA True PC9_epitope_Rep1 921.5032146458099 921.50210993586 22.639 2 0.019663343316434455 0.007641114123736751 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 47363 10057 IYIAGHPAF True NCI_RA007_Epitope_Rep3 987.51780208079 987.51670993586 46.654 2 0.01965124269493161 0.007641114123736751 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 140755 18003 YYQSSVQYL True PC9_epitope_Rep2 1149.5342399905699 1149.5331499358601 74.551 2 0.019650610086615013 0.007641114123736751 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 9574 9928 AYAPPPHVI True PC9_epitope_Rep6 963.5178020807899 963.51670993586 48.706 2 0.019641951558823267 0.007641114123736751 0.9438714419765777 ['ENSG00000128335|ENST00000358502|APOL2'] 64087 11522 LQEDPPAGV True PC9_epitope_Rep1 924.4552613938798 924.45416993586 49.198 2 0.019638003235526016 0.007641114123736751 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 76909 12488 NVLELNDVR True PC9_epitope_Rep2 1070.5720224816198 1070.57092993586 53.344 2 0.019635005066776796 0.007641114123736751 0.9438714419765777 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD'] 1262 7777 AEDPSQLP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 34.861 1 0.019593627117486846 0.007641114123736751 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 27185 17213 FLSQPILL True H1975_Epitope_Rep1 929.5586042636099 929.55750993586 71.671 2 0.019581739894615785 0.007641114123736751 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 36768 9739 GVPENGYQTLY True H1975_Epitope_Rep1 1239.5771674317102 1239.57606993586 42.391 2 0.019577633178720917 0.007641114123736751 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 54471 8355 LAAARLAAA True PC9_epitope_Rep1 826.5024863698198 826.50138993586 36.973 2 0.01957428071263591 0.007641114123736751 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 55894 15524 LDGGKELKIDI True PC9_epitope_Rep5 1199.6761531969898 1199.6750499358602 64.723 2 0.019567945913470854 0.007641114123736751 0.9438714419765777 ['nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 75786 11792 NRAPSLTL True PC9_epitope_Rep1 870.49231560894 870.49120993586 50.228 2 0.019559057365444235 0.007641114123736751 0.9438714419765777 ['nc|ENSG00000167695|Q8TBR7-1|TLCD3A', 'ENST00000570699.1_1_17:636236-644807:+|nuORF', 'ENSG00000167695|ENST00000308278|TLCD3A'] 23000 16510 EVISKLYAV True PC9_epitope_Rep1 1020.5855472874398 1020.58444993586 68.329 2 0.019557424654921603 0.007641114123736751 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8'] 119374 7520 VENPGGYVA True H1975_Epitope_Rep3 904.42904664604 904.4279499358599 33.906 2 0.01955203459239042 0.007641114123736751 0.9438714419765777 ['TFRC-TCTEX1D2|1|fusion', 'ENSG00000072274|ENST00000360110|TFRC'] 572 10509 AARLPLDAA True PC9_epitope_Rep2 896.5079656730799 896.50686993586 45.745 2 0.019546145026428735 0.007641114123736751 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 76045 16875 NRLEEPGNFVL True PC9_epitope_Rep6 1286.6619001151798 1286.66080993586 77.427 2 0.01953705255360544 0.007641114123736751 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 87530 10733 QTHSVFVNV True PC9_epitope_Rep6 1029.5243440132099 1029.5232499358601 52.104 2 0.01952027090490287 0.007641114123736751 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 132005 19585 VYGPLPQSF True PC9_epitope_Rep4 1006.5123823471798 1006.51187496793 83.456 1 0.01951784795269967 0.007641114123736751 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 72744 12771 NAAPGVDL True PC9_epitope_Rep2 755.38136817763 755.38026993586 54.428 2 0.01951439259783077 0.007641114123736751 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7'] 9396 7594 AVVGVVAGG True NCI_RA007_Epitope_Rep5 727.4228390667898 727.42229496793 35.905 1 0.019510101007516403 0.007641114123736751 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 37660 14871 HAGVISVL True PC9_epitope_Rep3 794.46503823194 794.46394993586 62.338 2 0.019475765339280634 0.007641114123736751 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 1590 15752 AEFLKVFLP True NCI_RA007_Epitope_Rep3 1062.6113681124598 1062.61026993586 69.598 2 0.019429609194829445 0.007641114123736751 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3'] 93893 13495 RVIDREGVYEI True PC9_epitope_Rep1 1347.7146639640298 1347.71302490379 56.765 3 0.019428122915960997 0.007641114123736751 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000533200.5_1_11:43904193-43919192:+|nuORF'] 95178 18074 SAAFPGASL True PC9_epitope_Rep5 819.41266830591 819.41156993586 74.536 2 0.019426363888189992 0.007641114123736751 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 87435 5354 QTEERVQPEY True H1975_Epitope_Rep3 1277.58879474457 1277.58768993586 25.664 2 0.019375021388713824 0.007641114123736751 0.9438714419765777 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 58587 8409 LFERLTLKHD True NCI_RA007_Epitope_Rep4 1270.70337100434 1270.70173490379 39.159 3 0.01935672965635132 0.007641114123736751 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL'] 54676 8425 LAEAALELREE True NCI_RA007_Epitope_Rep1 1242.6455813446998 1242.64448993586 36.773 2 0.019318339579862214 0.007641114123736751 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 135817 4308 YEQEGEVEKP True H1975_Epitope_Rep3 1206.5404475698197 1206.5393499358602 21.685 2 0.019314948650386916 0.007641114123736751 0.9438714419765777 ['nc|ENSG00000078674|Q15154-2|PCM1', 'ENSG00000078674|ENST00000325083|PCM1', 'nc|ENSG00000078674|Q15154-4|PCM1', 'nc|ENSG00000078674|Q15154-5|PCM1'] 375 15562 AALDIYETL True NCI_RA007_Epitope_Rep3 1007.51752729727 1007.51642993586 68.777 2 0.019304957521335497 0.007641114123736751 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ITCH-DYNLRB1|4|fusion', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH'] 125237 21092 VLQTVLQEV True PC9_epitope_Rep2 1027.5913609438699 1027.59026993586 86.588 2 0.019294083503582273 0.007641114123736751 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3'] 74096 5543 NHVNSGCQL True PC9_epitope_Rep3 970.42906372938 970.42796993586 26.401 2 0.019287454298619677 0.007641114123736751 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 132725 21846 VYSGGVYLF True PC9_epitope_Rep5 1003.5014833103099 1003.50038993586 89.065 2 0.01926912052684935 0.007641114123736751 0.9438714419765777 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 59337 22703 LGIYLAIGLL True PC9_epitope_Rep5 1044.65831830488 1044.6572299358602 92.333 2 0.0192666110934847 0.007641114123736751 0.9438714419765777 ['L1MB7_dup7884|chr6:109271511-109272669:-|1.663382698896682|0.075209377654616|4.47|479.0|78|3|anti-sense'] 83915 10984 QEISQELLY True H1975_Epitope_Rep2 1121.5604547384098 1121.5593499358602 47.276 2 0.019251314331391125 0.007641114123736751 0.9438714419765777 ['ENSG00000134698|ENST00000373210|AGO4'] 2767 7418 AEVDAAMAA True H1975_Epitope_Rep1 847.3745685450299 847.3740149679301 33.538 1 0.01920424599436912 0.007662320204328539 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 33253 20446 GLAISQLVDV True PC9_epitope_Rep3 1013.57571087973 1013.57517496793 83.901 1 0.019191094869413408 0.007662320204328539 0.9438714419765777 ['ENSG00000169684|ENST00000299565|CHRNA5'] 116656 23962 TYIPPLLVAF True PC9_epitope_Rep3 1132.6532329244399 1132.65212993586 97.455 2 0.01917913242537534 0.007662320204328539 0.9438714419765777 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF', 'ENST00000561809.1_1_16:75589903-75590146:-|nuORF'] 5925 11571 APHPPLSVV True PC9_epitope_Rep4 915.51780208079 915.51670993586 52.267 2 0.01916729611344682 0.007662320204328539 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 23715 17356 EYIKFLRSI True PC9_epitope_Rep4 1167.6651945904698 1167.66355490379 74.763 3 0.01916029202333922 0.007662320204328539 0.9438714419765777 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 39195 6742 HLGALLAR True PC9_epitope_Rep6 849.51847078713 849.51736993586 34.729 2 0.01914611840310263 0.007662320204328539 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 102491 7128 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 34.691 2 0.019142863575638703 0.007662320204328539 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 109837 17719 THLLGVAL True PC9_epitope_Rep2 822.49633836022 822.49524993586 73.437 2 0.01913339885819698 0.007683691756272402 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 113351 5444 TQKSLSLSPG True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.5496749679301 28.425 1 0.01913330381455908 0.007683691756272402 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 87340 8749 QTATTTMVY True H1975_Epitope_Rep3 1014.4691972058599 1014.46867496793 38.657 1 0.019133221394417352 0.007683691756272402 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 116260 18450 TVVAVVAGV True PC9_epitope_Rep5 813.4960040070499 813.49490993586 75.989 2 0.01912975122825247 0.007683691756272402 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 48729 7010 KENPYEDIP True H1975_Epitope_Rep3 1103.51350454599 1103.5124099358602 31.928 2 0.01910991314098828 0.007683691756272402 0.9438714419765777 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C', 'ENST00000481894.1_1_1:115138166-115167938:-|nuORF'] 83916 11019 QEISQELLY True H1975_Epitope_Rep2 1121.5604547384098 1121.55987496793 47.413 1 0.01908759299877127 0.007683691756272402 0.9438714419765777 ['ENSG00000134698|ENST00000373210|AGO4'] 744 13942 AAVPRAAFL True PC9_epitope_Rep4 914.5337864980999 914.53268993586 61.532 2 0.019068379594955685 0.007701435063917433 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 88219 17695 QYASLMHSF True PC9_epitope_Rep3 1082.48551597634 1082.4844099358602 73.261 2 0.01905623523829912 0.007701435063917433 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 88258 16201 QYESKVFYL True PC9_epitope_Rep6 1175.5862755634298 1175.5851699358602 74.671 2 0.019055595429884765 0.007701435063917433 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG'] 39528 17658 HPFDLGLYNEA True PC9_epitope_Rep6 1274.59315184902 1274.5920499358601 80.56 2 0.019043163179561493 0.007701435063917433 0.9438714419765777 ['ENSG00000106399|ENST00000223129|RPA3'] 45716 20196 ISLPLPNFSSL True H1975_Epitope_Rep1 1186.65977485686 1186.6586699358602 84.033 2 0.01903073246750434 0.007701435063917433 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 101664 21206 SPFQFTVGP True PC9_epitope_Rep5 978.4810822188999 978.47998993586 86.616 2 0.019008661203263413 0.007701435063917433 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 35046 5952 GRDENSVEL True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 31.194 2 0.01900085351500344 0.007701435063917433 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 133245 9661 WEEETVPTT True H1975_Epitope_Rep2 1090.4818700645399 1090.48127496793 42.141 1 0.018992316679886614 0.007701435063917433 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 1117 5547 AEAPPPPPP True H1975_Epitope_Rep2 871.44396843419 871.44341496793 26.344 1 0.01897667499057459 0.007701435063917433 0.9438714419765777 ['ENST00000354574.8_1_12:110434058-110434154:-|nuORF', 'DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 44968 8514 IQHPSNVL True PC9_epitope_Rep3 906.49231560894 906.49120993586 37.708 2 0.018953655757866023 0.007701435063917433 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 91836 12320 RPNDIMAEV True PC9_epitope_Rep4 1043.50697969691 1043.50647496793 55.199 1 0.018930606273640297 0.007701435063917433 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 73945 12570 NHLGGGAVVL True PC9_epitope_Rep5 935.51886470995 935.51776993586 53.35 2 0.018920225559940617 0.007701435063917433 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 28675 12078 FSSSAGPGL True PC9_epitope_Rep2 821.3919328613299 821.39082993586 51.77 2 0.018915529210985705 0.007701435063917433 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 2766 7316 AEVDAAMAA True H1975_Epitope_Rep1 847.3745685450299 847.3740149679301 33.148 1 0.018901353897879357 0.007701435063917433 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 105027 5878 STIKEVAQA True PC9_epitope_Rep5 945.5131106231698 945.51200993586 27.601 2 0.018882169524904558 0.007701435063917433 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 75334 8080 NPYYGGESA True PC9_epitope_Rep4 956.3875757568799 956.38646993586 38.532 2 0.018871208155772964 0.007701435063917433 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 135798 4740 YENPHYQSP True H1975_Epitope_Rep2 1133.47778774361 1133.4766899358601 23.324 2 0.018851297975979644 0.007701435063917433 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000515798.5_1_5:34923288-34925101:+|nuORF'] 72733 17759 MYSDVWKQL True PC9_epitope_Rep6 1168.5586809166 1168.55758993586 80.943 2 0.018819989314561365 0.007701435063917433 0.9438714419765777 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 14331 17182 DTDIVDEAIYY True H1975_Epitope_Rep3 1315.58197802863 1315.58147496793 71.729 1 0.018811618903270624 0.007701435063917433 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 1423 7609 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40140993586 34.22 2 0.018807526548724852 0.007701435063917433 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 28929 7440 FTENDKEYQEY True H1975_Epitope_Rep2 1464.6045043783597 1464.60340993586 33.563 2 0.01879802223830499 0.007701435063917433 0.9438714419765777 ['ENSG00000235272|ENST00000444122|RAMACL', 'ENSG00000169612|ENST00000304191|RAMAC'] 1703 5531 AEGPPTNPP True H1975_Epitope_Rep3 878.4133965819 878.41228993586 26.324 2 0.018792576383778053 0.007701435063917433 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1'] 44732 21305 IPQSIIECV True PC9_epitope_Rep3 1000.5263181591599 1000.52522993586 87.245 2 0.018778055521226866 0.007701435063917433 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000517662.1_1_8:75515525-75516083:-|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 107386 8325 SYSSTFHSL True NCI_RA007_Epitope_Rep3 1027.46107505031 1027.45996993586 39.863 2 0.018774395011359364 0.007701435063917433 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 76622 22698 NTIDILTAI True PC9_epitope_Rep1 972.54916177872 972.54861496793 92.112 1 0.018771051026421022 0.007701435063917433 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'DNM1L|p.G587Efs*12|1|0.19|ENSG00000087470|chr12:32740116-32740117|GC/-|frameshift_variant'] 40108 9634 HRDGEFQEL True PC9_epitope_Rep3 1129.51523588149 1129.5141299358602 42.007 2 0.01874798209725459 0.007701435063917433 0.9438714419765777 ['nc|ENSG00000136146|Q9NPJ6-2|MED4', 'ENSG00000136146|ENST00000258648|MED4'] 9908 12460 AYPHNLMTF True NCI_RA007_Epitope_Rep2 1092.50625142092 1092.5051499358601 53.077 2 0.018741677000504876 0.007701435063917433 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 120257 16796 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 69.43 2 0.018703623996912177 0.0077226127053767295 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 89291 9917 RELLGTITA True H1975_Epitope_Rep2 972.5603951687599 972.55928993586 43.135 2 0.018688540557002663 0.0077226127053767295 0.9438714419765777 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF'] 115564 7331 TVIAKVNNV True PC9_epitope_Rep2 956.5654805492 956.56438993586 33.58 2 0.018683143120890568 0.0077226127053767295 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 120286 16868 VFPDKGYSF True PC9_epitope_Rep5 1058.5072969667401 1058.5061899358602 69.893 2 0.018679158840616977 0.0077226127053767295 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 101503 12149 SPAAPVITA True PC9_epitope_Rep2 825.45961849833 825.4590749679301 52.041 1 0.01866551689624553 0.0077226127053767295 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 121421 12096 VGIDIFTGK True H1975_Epitope_Rep1 948.52803241132 948.52692993586 51.54 2 0.01866100726336933 0.0077226127053767295 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2', 'EIF5A2|p.K68T|2|0.22|ENSG00000163577|chr3:170907056-170907056|T/G|missense_variant'] 70500 22854 LYTDIINIF True PC9_epitope_Rep4 1110.5961119711399 1110.5950099358602 96.13 2 0.01863731272403176 0.0077226127053767295 0.9438714419765777 ['ENST00000533377.1_1_8:145066406-145067006:+|nuORF', 'ENSG00000178719|ENST00000395068|GRINA'] 48782 8253 KEQLPPLAAA True H1975_Epitope_Rep3 1036.5916952970397 1036.5905899358602 36.73 2 0.018614305645564974 0.007744130352066967 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 117046 15588 TYQLGFHSI True PC9_epitope_Rep6 1064.52909504048 1064.5279899358602 72.168 2 0.01861137651560084 0.007744130352066967 0.9438714419765777 ['ENSG00000142507|ENST00000270586|PSMB6'] 8970 11724 AVHDSFVAV True PC9_epitope_Rep2 943.4763311916299 943.4752299358599 50.43 2 0.01861034396397457 0.007744130352066967 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 18266 9172 EITALAPS True H1975_Epitope_Rep3 800.42798401688 800.42743496793 40.27 1 0.018606449048213156 0.007744130352066967 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 140822 8245 YYSPTKNEI True PC9_epitope_Rep6 1113.53423999057 1113.5331499358601 41.301 2 0.018601950500541947 0.007744130352066967 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 77807 18492 PAEPAFLA True PC9_epitope_Rep4 814.4225047136199 814.42140993586 79.203 2 0.018582035384295956 0.007765643183242324 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 1201 8729 AEDEAAALP True H1975_Epitope_Rep2 885.4079768482899 885.4074249679301 38.537 1 0.01857794106384475 0.007765643183242324 0.9438714419765777 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 14945 2837 DYNVTANSK True NCI_RA007_Epitope_Rep1 1010.4668887067401 1010.46578993586 14.859 2 0.018569183238441513 0.007765643183242324 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA'] 70784 9388 M[Oxidation]EENFAVEA True H1975_Epitope_Rep1 1054.4277266971399 1054.42662993586 41.022 2 0.01855629864082089 0.007765643183242324 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 89545 2606 RERRDNYVP True NCI_RA007_Epitope_Rep3 1203.6108676018298 1203.60922490379 14.725 3 0.018506745911620173 0.007765643183242324 0.9438714419765777 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 117562 10347 VAGGAVYL True H1975_Epitope_Rep3 748.4119400299201 748.41139496793 44.854 1 0.01846947997303713 0.007782101167315175 0.9438714419765777 ['ENST00000590075.1_1_19:5679497-5680497:-|nuORF', 'ENSG00000174917|ENST00000309324|MICOS13'] 100859 22226 SLSFDPLLI True PC9_epitope_Rep1 1003.5589981864299 1003.55790993586 90.315 2 0.01842086306187804 0.007782101167315175 0.9438714419765777 ['ENST00000506951.5_1_4:20711306-20720453:+|nuORF', 'nc|ENSG00000163138|Q8N7B6-2|PACRGL', 'ENSG00000163138|ENST00000503585|PACRGL'] 120844 6976 VGDPHTVTV True PC9_epitope_Rep2 923.47124581119 923.47014993586 32.23 2 0.018411905392512484 0.007782101167315175 0.9438714419765777 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 31674 14427 GEIDYEAIV True H1975_Epitope_Rep3 1007.48114178855 1007.48057496793 60.848 1 0.018409382425758833 0.007782101167315175 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6'] 39788 13134 HQDPQSIFV True PC9_epitope_Rep4 1069.51925863277 1069.5181699358602 58.414 2 0.0183961523457176 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 116847 16857 TYMKDLYQL True PC9_epitope_Rep6 1173.5739966275698 1173.57288993586 77.358 2 0.01836814641843252 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000146376|Q8N392-2|ARHGAP18', 'ENSG00000146376|ENST00000368149|ARHGAP18'] 22219 9799 ETDKNGFLQY True H1975_Epitope_Rep2 1213.5615173675699 1213.5604299358602 42.678 2 0.018364821681323275 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 114669 5300 TSREVQTAV True PC9_epitope_Rep5 989.5141732523299 989.51306993586 25.4 2 0.018358326844232588 0.007782101167315175 0.9438714419765777 ['ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1'] 21714 13028 ERYPYPVRL True PC9_epitope_Rep2 1191.6400424717897 1191.63838490379 55.393 3 0.018315507940895433 0.007782101167315175 0.9438714419765777 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 139606 15481 YTRELLLEL True NCI_RA007_Epitope_Rep4 1148.6441247927198 1148.64302993586 67.219 2 0.01830744367338647 0.007782101167315175 0.9438714419765777 ['ENSG00000129925|ENST00000431232|PGAP6'] 84967 17628 QIDGTLSTI True PC9_epitope_Rep5 946.49712620586 946.49602993586 72.817 2 0.018299066693738722 0.007782101167315175 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 129824 14736 VTLGEVPAA True PC9_epitope_Rep4 855.4701831820299 855.46908993586 64.615 2 0.018297952812180652 0.007782101167315175 0.9438714419765777 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|245|11.93|0.02|9.4|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3', 'chrX:152751574-152753788|174|17.34|0.02|9.87|-|ENST00000611674|MAGEA2,MAGEA2', 'chrX:152751822-152752394|202|24.98|0.06|8.82|-|ENST00000623806|MAGEA2,MAGEA2', 'ENSG00000268606|ENST00000684311|MAGEA2', 'ENSG00000183305|ENST00000682532|MAGEA2B', 'chrX:152753623-152753788|178|10.09|0.02|9.31|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152753391-152753542|175|16.75|0.02|9.45|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152752513-152753788|203|29.14|0.06|8.98|-|ENST00000620710|MAGEA2,MAGEA2', 'chrX:152753391-152753788|192|21.18|0.03|9.4|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152751725|206|35.77|0.07|9.03|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152752394|220|50.13|0.12|8.73|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152751428-152751509|251|75.14|0.18|8.7|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152714682-152716896|187|20.44|0.02|9.74|+|ENST00000370293|MAGEA2B,MAGEA2B', 'chrX:152752513-152753313|204|33.18|0.07|8.98|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152716745-152716896|206|35.69|0.07|9.02|+|ENST00000447530|MAGEA2B,MAGEA2B', 'MAGEA3|p.A154Lfs*13|1|0.29|ENSG00000221867|chrX:152701292-152701292|G/-|frameshift_variant', 'chrX:152714682-152715079|194|21.52|0.03|9.39|+|ENST00000447530|MAGEA2B,MAGEA2B'] 9809 11592 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51257496793 52.347 1 0.018297882840330446 0.007782101167315175 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 94696 8357 RYLENGKETL True PC9_epitope_Rep3 1221.6353510141698 1221.63424993586 37.113 2 0.018285601516273193 0.007782101167315175 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 92245 5020 RQKLEAQL True NCI_RA007_Epitope_Rep4 984.5716285587998 984.57052993586 25.795 2 0.01826829483288681 0.007782101167315175 0.9438714419765777 ['ENSG00000204220|ENST00000374606|PFDN6', 'ENST00000395134.3_1_6:33257633-33258228:+|nuORF', 'ENST00000491382.1_1_6:33257633-33258228:+|nuORF'] 83093 22781 PYNDYFEYF True PC9_epitope_Rep3 1256.50260550912 1256.50207496793 92.896 1 0.018249595888746525 0.007782101167315175 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 17414 5430 EHFPNHQQL True PC9_epitope_Rep4 1148.53630567924 1148.53465490379 27.619 3 0.01823473553447927 0.007782101167315175 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 107527 9449 TADGAHFEL True NCI_RA007_Epitope_Rep5 959.43486030247 959.43376993586 42.982 2 0.018233347152095927 0.007782101167315175 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP', 'ENST00000546538.1_1_19:16643407-16652813:-|nuORF'] 119781 9160 VEVDAAVTP True H1975_Epitope_Rep1 899.4600124211499 899.4594649679301 40.141 1 0.018205409247258764 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 17705 14027 EHSLSIGSL True PC9_epitope_Rep4 941.4818104948899 941.48070993586 61.866 2 0.018190392791278886 0.007782101167315175 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 71583 22853 MLFPGSIAL True PC9_epitope_Rep3 947.51502519947 947.51392993586 93.176 2 0.018151165011649373 0.007782101167315175 0.9438714419765777 ['ENSG00000101367|ENST00000375571|MAPRE1'] 89589 3536 RESKVVVPP True NCI_RA007_Epitope_Rep5 1009.5920296502098 1009.59092993586 19.474 2 0.018137383428036415 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3'] 110059 15294 THYDHVLIEL True PC9_epitope_Rep6 1238.6295373577398 1238.62844993586 70.946 2 0.018127739019384494 0.007782101167315175 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 139284 6678 YTDKIM[Oxidation]TY True H1975_Epitope_Rep1 1049.47394861357 1049.47284993586 30.741 2 0.01812218668693122 0.007782101167315175 0.9438714419765777 ['ENSG00000076685|ENST00000404739|NT5C2', 'nc|ENSG00000076685|P49902-2|NT5C2'] 47238 17618 IYDSVKVYF True PC9_epitope_Rep6 1132.5804619069997 1132.57936993586 80.407 2 0.018115522319880003 0.007782101167315175 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3', 'ENST00000547869.1_1_12:98994914-98995303:+|nuORF'] 8880 14358 AVFVRGVGV True PC9_epitope_Rep1 902.5337864980997 902.53268993586 60.052 2 0.01810145342892376 0.007782101167315175 0.9438714419765777 ['ENST00000232458.9_1_3:172468581-172468611:+|nuORF'] 31817 6998 GEMPKTLAC True NCI_RA007_Epitope_Rep3 948.4408742830399 948.43976993586 34.637 2 0.018076484173462602 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000124731|Q9NP99-3|TREM1', 'ENST00000586287.1_1_6:41250094-41254393:-|nuORF', 'nc|ENSG00000124731|Q9NP99-2|TREM1', 'ENSG00000124731|ENST00000244709|TREM1'] 89140 4361 REFTDSAEA True NCI_RA007_Epitope_Rep5 1024.4461532621597 1024.4450499358602 23.388 2 0.01807396117281306 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL'] 88211 14031 QYASAFHFL True NCI_RA007_Epitope_Rep4 1082.51853035678 1082.51742993586 61.253 2 0.01806007267389082 0.007782101167315175 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 122107 4239 VGRGARLQTAL True NCI_RA007_Epitope_Rep4 1140.6727395823998 1140.67108490379 22.622 3 0.018056844561936635 0.007782101167315175 0.9438714419765777 ['ENSG00000137877|ENST00000320955|SPTBN5'] 38626 16240 HHIYLEGTLL True PC9_epitope_Rep4 1194.6397081186199 1194.63805490379 70.41 3 0.018045493824218297 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 86278 9766 QQDPQQYNV True PC9_epitope_Rep3 1118.49925146418 1118.49814993586 42.517 2 0.018044658218762614 0.007782101167315175 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 140642 18054 YYPAQGVQQF True PC9_epitope_Rep5 1199.56112344475 1199.56002993586 74.459 2 0.018033645759403246 0.007782101167315175 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 129335 14352 VTDTGALYLY True H1975_Epitope_Rep1 1114.55464108198 1114.5540749679299 60.397 1 0.018019255660505572 0.007782101167315175 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 118152 12848 VAVGVIKAV True PC9_epitope_Rep5 854.5589386167799 854.55784993586 54.43 2 0.017996232864542917 0.0077926137632295805 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 48388 4618 KEAVTTIAA True NCI_RA007_Epitope_Rep3 902.5072969667399 902.50618993586 25.079 2 0.01799369667563215 0.0077926137632295805 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 54257 20136 KYPHYFPLL True PC9_epitope_Rep5 1176.6331661862 1176.63151490379 82.502 3 0.017970715894746137 0.0077926137632295805 0.9438714419765777 ['ENSG00000172009|ENST00000307741|THOP1'] 24600 5432 FANGRSTGL True PC9_epitope_Rep2 921.46682913709 921.4657299358599 26.286 2 0.01796203525436847 0.0077926137632295805 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 100487 11586 SLPKGVVEV True PC9_epitope_Rep4 926.54368247546 926.5431349679301 52.325 1 0.017946032190818348 0.0077926137632295805 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 13840 12203 DRAGSIVL True PC9_epitope_Rep1 829.46576650793 829.46466993586 51.797 2 0.017933420198716334 0.0077926137632295805 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 87166 20356 QSLAGGIIGV True PC9_epitope_Rep2 913.5232813840499 913.5227349679301 83.722 1 0.017922287883689124 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 45012 19961 IQLPSVNTV True PC9_epitope_Rep3 969.54949613189 969.54838993586 82.025 2 0.01790260137155724 0.0077926137632295805 0.9438714419765777 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292'] 135234 9072 YAYDGKDYLA True NCI_RA007_Epitope_Rep5 1177.5291546101298 1177.52804993586 41.551 2 0.017883529889955757 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 60445 21437 LILEPSLYTV True PC9_epitope_Rep4 1146.65362684726 1146.65252993586 90.636 2 0.017868877486599346 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'ENST00000553009.5_1_12:54718935-54736154:+|nuORF'] 70790 9411 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 41.166 2 0.01785254574044183 0.0077926137632295805 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 108716 6745 TEMFPERVRSA True H1975_Epitope_Rep2 1321.6448701520499 1321.64323490379 30.859 3 0.017850859774573756 0.0077926137632295805 0.9438714419765777 ['ENSG00000100216|ENST00000216034|TOMM22', 'ENST00000492561.1_1_22:39078186-39079843:+|nuORF'] 132398 17856 VYNENLVHMI True PC9_epitope_Rep4 1230.60669373818 1230.60558993586 76.722 2 0.017841133672295367 0.0077926137632295805 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 91757 5967 RPKPIITSV True PC9_epitope_Rep6 1009.62841515893 1009.62730993586 31.259 2 0.01784022956953117 0.0077926137632295805 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 132380 7221 VYMNRVKEI True PC9_epitope_Rep4 1150.6168644990598 1150.61521490379 35.08 3 0.017834709297511846 0.0077926137632295805 0.9438714419765777 ['ENSG00000197223|ENST00000410067|C1D', 'ENST00000455013.2_1_10:81784495-81784867:-|nuORF'] 88062 18813 QVVGGIYGV True PC9_epitope_Rep3 890.4861675993399 890.48561496793 77.588 1 0.017809488583657385 0.0077926137632295805 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 90875 11320 RLAPAGIPA True PC9_epitope_Rep5 864.51813643396 864.51702993586 48.537 2 0.017793339540243147 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 109733 8686 THGPPVQL True PC9_epitope_Rep2 847.45520182423 847.45410993586 38.775 2 0.017774599622954097 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 47792 8143 IYQRHVYNL True PC9_epitope_Rep2 1204.6352914445197 1204.6336349037902 36.679 3 0.017772719321460427 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 34377 12729 GPSVFLFPPK True NCI_RA007_Epitope_Rep5 1087.6066170851898 1087.6055299358602 55.626 2 0.01776135903212761 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 73933 14117 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69646993586 66.17 2 0.01773727304918149 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 35478 22287 GTFDIFYTA True PC9_epitope_Rep2 1033.4756624852898 1033.47507496793 91.205 1 0.017736627445110793 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 54672 7866 LAEAALELREE True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 35.209 2 0.017714131870284026 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 30091 23628 FYPAIADLF True PC9_epitope_Rep2 1055.5327834385898 1055.5322749679299 96.356 1 0.017705114976145808 0.0077926137632295805 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 140901 21283 YYVGGEIVTI True PC9_epitope_Rep5 1112.57537652656 1112.5748749679299 86.918 1 0.017681094428177235 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 129331 9250 VTDSTQVNV True PC9_epitope_Rep5 961.47163973401 961.47054993586 40.527 2 0.017672787281679134 0.0077926137632295805 0.9438714419765777 ['ENST00000420642.1_7:74765936-74789271:+|nuORF', 'nc|ENSG00000274523|Q96I51-3|RCC1L', 'ENSG00000274523|ENST00000610322|RCC1L', 'nc|ENSG00000274523|Q96I51-2|RCC1L'] 68704 13620 LVDDPLEY True H1975_Epitope_Rep2 962.4596780679799 962.45858993586 57.527 2 0.01767174749265178 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 123654 18682 VILSLILHL True PC9_epitope_Rep6 1019.6743027221901 1019.67320993586 84.504 2 0.01760060707784805 0.0077926137632295805 0.9438714419765777 ['ENSG00000113249|ENST00000523175|HAVCR1'] 102533 11110 SQAEKVYIM True PC9_epitope_Rep2 1067.5321318155898 1067.53102993586 48.059 2 0.01755720455276989 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000515766.1_1_4:1332171-1332954:+|nuORF'] 76256 16962 NSDLNNLLF True H1975_Epitope_Rep3 1048.5189242796 1048.51837496793 70.832 1 0.017542661151475764 0.0077926137632295805 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 118104 8257 VATVSLPR True PC9_epitope_Rep6 841.5021520166499 841.50104993586 41.357 2 0.017510547716436106 0.0077926137632295805 0.9438714419765777 ['CON__P00761'] 64538 6014 LRDEHNYTL True PC9_epitope_Rep6 1159.56218607391 1159.56055490379 31.469 3 0.01749251301474662 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 105622 10510 SVFAGVGER True PC9_epitope_Rep3 920.4715801643599 920.47048993586 45.364 2 0.01748987910013309 0.0077926137632295805 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 21327 17259 ERLDPGLAL True PC9_epitope_Rep5 982.5447451046198 982.54364993586 71.398 2 0.017473510702434497 0.0077926137632295805 0.9438714419765777 ['ENSG00000237649|ENST00000428849|KIFC1'] 53932 4720 KYISKPENL True NCI_RA007_Epitope_Rep3 1090.60225998074 1090.60116993586 25.515 2 0.017453259269907477 0.0077926137632295805 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 72576 16258 MVPEDVPRL True PC9_epitope_Rep5 1054.5481162329 1054.5470099358602 67.528 2 0.01744159063175975 0.0077926137632295805 0.9438714419765777 ['ENSG00000272333|ENST00000420124|KMT2B'] 77448 7091 NYNNQSSNF True PC9_epitope_Rep6 1086.4366512076201 1086.43554993586 36.312 2 0.017439390048924114 0.0077926137632295805 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 34959 17369 GQWYGPNTV True PC9_epitope_Rep3 1020.4664947839199 1020.46538993586 71.981 2 0.017430428659581824 0.0077926137632295805 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 71083 6522 METAAAVAA True H1975_Epitope_Rep2 833.3953039896098 833.39420993586 30.0 2 0.01739165562885347 0.0077926137632295805 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 35373 15882 GTASGFYTV True PC9_epitope_Rep2 901.4181476091701 901.41704993586 66.345 2 0.017389779695709012 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 74198 19014 NIANHFFTV True PC9_epitope_Rep2 1061.52942939365 1061.52887496793 78.502 1 0.017381887417826265 0.0077926137632295805 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 123317 10546 VHSTNVLL True PC9_epitope_Rep5 881.49706663621 881.49596993586 45.554 2 0.017374426171877757 0.0077926137632295805 0.9438714419765777 ['BACH1|p.I569Sfs*11|1|0.53|ENSG00000156273|chr21:29329623-29329624|TT/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 79280 8621 PGHLQEGFG True PC9_epitope_Rep5 940.4402800360799 940.43918993586 38.103 2 0.017365756025494408 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 92082 8904 RPSSQYIVA True PC9_epitope_Rep1 1019.53999407735 1019.53888993586 39.088 2 0.017356340003770482 0.0077926137632295805 0.9438714419765777 ['ENSG00000103257|ENST00000261622|SLC7A5', 'ENST00000437413.2_1_16:21498935-21531497:-|nuORF', 'nc|ENSG00000260727|Q8MH63|SLC7A5P1', 'nc|ENSG00000258186|Q9GIP4-1|SLC7A5P2', 'nc|ENSG00000258186|Q9GIP4|SLC7A5P2', 'ENST00000522841.6_1_16:21495824-21531728:-|nuORF'] 38004 5717 HEIEGAHLP True NCI_RA007_Epitope_Rep3 1001.4930438849299 1001.49194993586 29.463 2 0.017356338449262567 0.0077926137632295805 0.9438714419765777 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3'] 81772 7970 PSDPVQPQY True H1975_Epitope_Rep3 1029.4767251144501 1029.47562993586 35.628 2 0.017353866230334837 0.0077926137632295805 0.9438714419765777 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9'] 71946 18356 MPTLPPPSV True PC9_epitope_Rep4 937.49428975489 937.49318993586 78.674 2 0.017349193512114707 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 25069 12395 FDEILEASD True H1975_Epitope_Rep1 1037.4553209635299 1037.4542299358602 52.711 2 0.017349119783453847 0.0077926137632295805 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'nc|ENSG00000067225|P14618-2|PKM'] 102359 5282 SPVFTSRSAA True PC9_epitope_Rep6 1021.51925863277 1021.51816993586 28.114 2 0.01732707940158294 0.0077926137632295805 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 90874 10305 RLAPAGIPA True PC9_epitope_Rep2 864.51813643396 864.51702993586 44.966 2 0.017326261378199957 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 84100 6902 QEQGDAPAI True H1975_Epitope_Rep3 927.4297749220298 927.42922496793 31.509 1 0.017292554610673864 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32918272-32920828:-|nuORF', 'ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 72001 22909 MQDPMEIFV True PC9_epitope_Rep3 1108.49330377872 1108.49220993586 93.386 2 0.017290582134850397 0.0077926137632295805 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF'] 10032 15366 AYTTVLQEW True NCI_RA007_Epitope_Rep3 1109.5393253710097 1109.53822993586 68.001 2 0.017285625567001365 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 11861 11928 DHNGMLSV True PC9_epitope_Rep3 871.38580193507 871.38470993586 50.902 2 0.017274668158946207 0.0077926137632295805 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 4596 21009 ALADDDFLTV True PC9_epitope_Rep4 1078.5182555732601 1078.51714993586 88.972 2 0.017274059890258413 0.0077926137632295805 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 67486 14484 LTEIMSMGY True H1975_Epitope_Rep3 1043.46675467771 1043.4661749679299 61.072 1 0.017243434479420512 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A', 'ENST00000588329.5_1_19:13056723-13059660:+|nuORF', 'nc|ENSG00000179262|P54725-2|RAD23A'] 71166 13416 MEYNLIQQC True NCI_RA007_Epitope_Rep3 1140.4943664078799 1140.49326993586 60.05 2 0.017242259883446243 0.0077926137632295805 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'ENST00000466513.1_1_17:57742174-57744343:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 71077 5350 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep3 849.3902189896098 849.38912993586 25.65 2 0.017238686447815153 0.0077926137632295805 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 37753 9939 HAVGDIPGV True PC9_epitope_Rep6 863.45011644379 863.44900993586 48.755 2 0.017235291406109698 0.0077926137632295805 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 119035 11654 VEGIETVTV True H1975_Epitope_Rep3 945.50187723313 945.50078993586 49.963 2 0.0172094174676247 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'ENST00000523243.5_1_8:135490727-135577256:-|nuORF'] 126140 14256 VPFAAPATA True PC9_epitope_Rep2 843.4490538146299 843.44850496793 60.102 1 0.017208524236679543 0.0077926137632295805 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 71105 8567 METGTGLTP True H1975_Epitope_Rep2 905.4164333570099 905.4158849679301 37.906 1 0.017194212541492563 0.0077926137632295805 0.9438714419765777 ['ENSG00000068489|ENST00000262293|PRR11'] 96830 9562 SESLIKQIP True H1975_Epitope_Rep1 1013.57571087973 1013.5746099358599 41.706 2 0.01717805608674078 0.0077926137632295805 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 89569 10137 RESDKMWLV True H1975_Epitope_Rep2 1162.58047899034 1162.57882490379 43.991 3 0.01716433268419586 0.0077926137632295805 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 98420 22629 SIIPPLFTV True PC9_epitope_Rep4 985.58481901145 985.58372993586 95.271 2 0.017154203140126317 0.0077926137632295805 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 114667 6025 TSRENVSI True PC9_epitope_Rep6 904.4614094034799 904.46030993586 31.519 2 0.017152427378984692 0.0077926137632295805 0.9438714419765777 ['ENSG00000069248|ENST00000261396|NUP133'] 67023 20379 LTAPALALA True PC9_epitope_Rep1 839.5116540711899 839.51110496793 83.214 1 0.017128505742468096 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 95671 6525 SAVTSVAKV True PC9_epitope_Rep2 860.4967322830399 860.49562993586 30.514 2 0.017127610496152 0.0077926137632295805 0.9438714419765777 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27', 'IFI27|p.S8L|1|0.19|ENSG00000165949|chr14:94111705-94111705|C/T|missense_variant'] 91863 7442 RPNPPPVSV True PC9_epitope_Rep4 961.53451477409 961.53340993586 35.976 2 0.01711046133084722 0.007812848787892316 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 129411 6106 VTEIDQDKY True H1975_Epitope_Rep2 1109.5240692296898 1109.5229699358601 28.464 2 0.017101380387531947 0.007812848787892316 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 5507 14083 [Acetylation]-AM[Oxidation]VSEFLK True H1975_Epitope_Rep3 981.4841196907499 981.48357496793 59.496 1 0.017093884423097273 0.007812848787892316 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 17420 7212 EHFPNHQQL True PC9_epitope_Rep5 1148.53630567924 1148.5352099358602 32.705 2 0.017074994934569782 0.007812848787892316 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 68819 6682 LVDSNNPKI True PC9_epitope_Rep4 998.53965972418 998.53856993586 32.884 2 0.01706914105180725 0.007812848787892316 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 29301 15272 FVDPLVTNY True H1975_Epitope_Rep3 1066.53351171458 1066.53297496793 64.153 1 0.01706095213728401 0.007812848787892316 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 130668 21119 VVDALWNEEAL True PC9_epitope_Rep2 1257.62411762413 1257.6230299358601 86.693 2 0.017051899390942173 0.007812848787892316 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 5695 20589 APAPVFFVT True PC9_epitope_Rep4 947.5116540711899 947.51054993586 87.348 2 0.017032917179701578 0.007812848787892316 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'nc|ENSG00000108846|O15438-5|ABCC3', 'nc|ENSG00000108846|O15438-3|ABCC3'] 37540 21302 GYMEGYYTF True PC9_epitope_Rep3 1129.44264810485 1129.44207496793 87.234 1 0.01702539117077303 0.007812848787892316 0.9438714419765777 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 2118 8849 AELQRLVAA True NCI_RA007_Epitope_Rep1 969.5607295219298 969.55962993586 38.421 2 0.016964545090148928 0.007812848787892316 0.9438714419765777 ['ENSG00000150779|ENST00000504148|TIMM8B'] 72264 19812 MSDLLSPLLY True H1975_Epitope_Rep2 1150.59439771898 1150.5938749679299 82.188 1 0.01694024660467084 0.007812848787892316 0.9438714419765777 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15'] 49059 14332 KFNPVSFTW True NCI_RA007_Epitope_Rep3 1124.5654805492 1124.5643899358602 63.69 2 0.016918316559351908 0.007812848787892316 0.9438714419765777 ['ENSG00000124702|ENST00000326974|KLHDC3'] 41311 11956 IAIDNLEKA True PC9_epitope_Rep4 985.54441075145 985.54330993586 53.778 2 0.016867870878855554 0.007831674773528493 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-1|BNIP1'] 135005 10703 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.3808149679301 46.484 1 0.01683943098003359 0.007831674773528493 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 123414 14286 VIDRNLLIL True NCI_RA007_Epitope_Rep4 1067.6702799709099 1067.66918993586 62.252 2 0.016835985921230704 0.007831674773528493 0.9438714419765777 ['ENSG00000153208|ENST00000295408|MERTK', 'TMEM87B-MERTK|2|fusion', 'ENST00000473065.1_1_2:112754988-112760808:+|nuORF'] 104037 15533 SRSVALAVL True PC9_epitope_Rep5 914.5549158655 914.55380993586 64.758 2 0.016797206778723654 0.007831674773528493 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant', 'B2M|p.L15Ffs*41|2|0.34|ENSG00000166710|chr15:44711583-44711584|CT/-|frameshift_variant'] 7788 20267 [Acetylation]-ASVSELAC[Carbamidomethyl]IY True H1975_Epitope_Rep1 1153.53252633414 1153.5314299358602 84.304 2 0.01679157064499788 0.007831674773528493 0.9438714419765777 ['nc|ENSG00000137818|P05386-2|RPLP1', 'ENSG00000137818|ENST00000260379|RPLP1', 'ENST00000487304.6_1_15:69745218-69746066:+|nuORF'] 25588 4546 FESTDPREA True H1975_Epitope_Rep2 1050.4618033262998 1050.4607099358602 22.595 2 0.016789725982936057 0.007831674773528493 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 14082 17784 DSDPFSSFY True H1975_Epitope_Rep1 1063.41345615155 1063.4128749679298 74.032 1 0.016774021760782652 0.007831674773528493 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF', 'ENST00000496688.1_1_9:123589031-123593637:-|nuORF', 'PSMD5|p.L270V|1|0.16|ENSG00000095261|chr9:120826771-120826771|G/C|missense_variant'] 54473 7196 LAAARLAAA True PC9_epitope_Rep2 826.5024863698198 826.50138993586 33.07 2 0.01674793495331147 0.007831674773528493 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 31672 14518 GEIDYEAIV True H1975_Epitope_Rep2 1007.48114178855 1007.48057496793 61.002 1 0.016732354081151334 0.007831674773528493 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6'] 117799 8266 VAMEAVAA True H1975_Epitope_Rep2 760.3789256494799 760.3783749679301 36.747 1 0.01671322000455251 0.007831674773528493 0.9438714419765777 ['GLI2|p.Q1236Sfs*2|1|0.25|ENSG00000074047|chr2:120989667-120989667|C/-|frameshift_variant', 'ENSG00000074047|ENST00000361492|GLI2', 'nc|ENSG00000074047|P10070|GLI2', 'nc|ENSG00000074047|P10070-4|GLI2', 'nc|ENSG00000074047|P10070-3|GLI2', 'ENST00000452692.5_1_2:121728002-121748192:+|nuORF', 'ENST00000438299.5_1_2:121728002-121748192:+|nuORF', 'nc|ENSG00000074047|P10070-2|GLI2', 'nc|ENSG00000074047|P10070-1|GLI2'] 114251 9914 TRYQIPKEV True PC9_epitope_Rep5 1132.6240580544797 1132.62241490379 43.106 3 0.01670663622945351 0.007831674773528493 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L'] 17090 8653 EGRDTHYLI True PC9_epitope_Rep6 1102.54072235334 1102.5396299358601 43.112 2 0.01670369886288673 0.007831674773528493 0.9438714419765777 ['TENM1|p.F2575L|1|0.89|ENSG00000009694|chrX:124380991-124380991|A/G|missense_variant'] 95217 6450 SAAPISARV True H1975_Epitope_Rep3 870.49231560894 870.49120993586 29.784 2 0.016680668031052986 0.007831674773528493 0.9438714419765777 ['ENSG00000233436|ENST00000422652|BTBD18'] 32106 13754 GEYGNLVTI True NCI_RA007_Epitope_Rep4 964.48656152216 964.48601496793 60.132 1 0.01665709873272255 0.007831674773528493 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525056.1_1_11:108203545-108206748:+|nuORF'] 130290 21431 VTTEESFYL True PC9_epitope_Rep1 1087.5073565363898 1087.50624993586 87.272 2 0.01664137718472747 0.007831674773528493 0.9438714419765777 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3'] 37529 9317 GYLPNKQVL True NCI_RA007_Epitope_Rep4 1030.5811306133398 1030.58002993586 42.694 2 0.01662584647779658 0.007831674773528493 0.9438714419765777 ['GCH1|p.G164D|1|0.26|ENSG00000131979|chr14:54859699-54859699|C/T|missense_variant', 'nc|ENSG00000131979|P30793-3|GCH1', 'nc|ENSG00000131979|P30793-2|GCH1', 'nc|ENSG00000131979|P30793-4|GCH1', 'ENSG00000131979|ENST00000491895|GCH1'] 71824 18481 MPAGSFITA True PC9_epitope_Rep5 893.43168949833 893.4311449679301 76.108 1 0.016620842109428685 0.007831674773528493 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 1128 7793 AEAPPPSVV True H1975_Epitope_Rep2 865.45453311789 865.4539849679301 34.924 1 0.016604621357706528 0.007831674773528493 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF'] 5959 8795 APITGQVSA True PC9_epitope_Rep2 842.4497820906199 842.44868993586 39.184 2 0.016600307401443793 0.007831674773528493 0.9438714419765777 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 102261 5294 SPTKNNIAV True PC9_epitope_Rep1 942.5134449763399 942.51234993586 25.206 2 0.016579736105390857 0.007831674773528493 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 54917 7454 LAGPLRPAA True PC9_epitope_Rep4 864.5181364339599 864.51702993586 36.026 2 0.016553098629349713 0.007850483964494403 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 70730 5623 MEADLKAAA True H1975_Epitope_Rep2 918.4480678384599 918.44696993586 26.628 2 0.016546528986292 0.007850483964494403 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 38163 5216 HERPEFIA True NCI_RA007_Epitope_Rep5 997.4981292653698 997.49702993586 26.759 2 0.01651978663422377 0.007850483964494403 0.9438714419765777 ['ENST00000550009.1_1_12:120875908-120876378:+|nuORF', 'ENSG00000111775|ENST00000229379|COX6A1'] 47614 17103 IYPDSFTVL True NCI_RA007_Epitope_Rep5 1053.53826274185 1053.5371699358602 72.556 2 0.01651579293507015 0.007850483964494403 0.9438714419765777 ['RWDD1-FAM26D|1|fusion', 'ENSG00000111832|ENST00000466444|RWDD1'] 1290 7465 AEDSPAIGP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 33.693 1 0.016513763772876684 0.007850483964494403 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 97769 13017 SHGPIAVL True PC9_epitope_Rep3 792.4493881678001 792.44828993586 55.099 2 0.0165024987718381 0.007850483964494403 0.9438714419765777 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 70804 10294 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42662993586 44.648 2 0.01644119265005974 0.007850483964494403 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 133530 13429 WHHTFYNEL True PC9_epitope_Rep4 1245.55670677065 1245.55560993586 59.554 2 0.016439147775109242 0.007850483964494403 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 46734 14501 IVAPGKGILAA True PC9_epitope_Rep3 1008.6331661861998 1008.63206993586 60.897 2 0.016431994206502088 0.007850483964494403 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 109685 13247 THEEGSYLF True PC9_epitope_Rep4 1081.47163973401 1081.4705499358602 58.854 2 0.01643033562470107 0.007850483964494403 0.9438714419765777 ['ENSG00000182827|ENST00000366812|ACBD3'] 131997 13783 VYGPLPQSF True NCI_RA007_Epitope_Rep3 1006.5123823471798 1006.51187496793 61.546 1 0.01641455500260282 0.007850483964494403 0.9438714419765777 ['ENSG00000131143|ENST00000253452|COX4I1', 'ENST00000568339.5_1_16:85840315-85840477:+|nuORF', 'ENST00000562929.1_1_16:85838708-85840477:+|nuORF', 'ENST00000564648.1_1_16:85839106-85840477:+|nuORF'] 110068 7887 TIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1005.4437110134398 1005.44260993586 35.313 2 0.016383281797269247 0.007850483964494403 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 111338 23119 TLIEDILGV True PC9_epitope_Rep4 971.5539128059899 971.5533649679301 97.147 1 0.016382469912894635 0.007850483964494403 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 102479 8027 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 35.851 2 0.016366064842594303 0.007850483964494403 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 125005 6217 VLNTNIDGR True PC9_epitope_Rep6 1000.53015766964 1000.52906993586 32.383 2 0.016364405256625022 0.007850483964494403 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18'] 86043 19314 QPLIGAIAA True PC9_epitope_Rep3 852.5069030439199 852.50580993586 79.513 2 0.016363929762531145 0.007850483964494403 0.9438714419765777 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 78199 8585 PAPPPPPPP True PC9_epitope_Rep5 865.46978925921 865.46868993586 37.963 2 0.016352684827208412 0.007850483964494403 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 52523 5032 KPPPPPPPP True PC9_epitope_Rep3 922.5276384884999 922.52654993586 24.445 2 0.016342318164367993 0.007850483964494403 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 58224 9219 LESTPSPVV True H1975_Epitope_Rep3 927.49131254943 927.4907649679301 40.453 1 0.01633933879347001 0.007850483964494403 0.9438714419765777 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000471515.5_1_22:51018486-51019028:-|nuORF', 'ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA', 'ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 105036 5775 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 29.697 3 0.01633143246899155 0.007850483964494403 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 11965 16659 DHTLGNII True PC9_epitope_Rep3 881.46068112749 881.45958993586 69.214 2 0.016277527194662363 0.007869451813540807 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 120184 15996 VFLKAGASF True PC9_epitope_Rep5 938.5225531080598 938.52144993586 66.519 2 0.016268908528547867 0.007869451813540807 0.9438714419765777 ['ENST00000368875.6_2_1:151298654-151299818:-|nuORF'] 107447 18320 SYVQVTSNF True PC9_epitope_Rep1 1043.49237517859 1043.49187496793 75.257 1 0.01626028856289535 0.007869451813540807 0.9438714419765777 ['ENSG00000072364|ENST00000265343|AFF4'] 109901 4118 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 22.157 2 0.016259990713535528 0.007869451813540807 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 139759 11896 YVADLVHSA True PC9_epitope_Rep5 973.4868958753299 973.48578993586 50.755 2 0.01625178192498674 0.007869451813540807 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 6368 7914 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 35.421 2 0.01624322154936765 0.007869451813540807 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 64532 6350 LRDEHNYTL True PC9_epitope_Rep4 1159.56218607391 1159.56055490379 31.502 3 0.016241241247052743 0.007869451813540807 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 127363 9665 VQPSKYHFL True PC9_epitope_Rep4 1117.5920296502102 1117.59092993586 44.804 2 0.01623912433847709 0.007869451813540807 0.9438714419765777 ['ENSG00000177383|ENST00000317897|MAGEF1'] 6127 8561 APNLQNQQV True PC9_epitope_Rep4 1010.5145076055 1010.51397496793 40.41 1 0.01622728725778537 0.007869451813540807 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 136618 11857 YIDEGRLVL True NCI_RA007_Epitope_Rep5 1076.5866099165999 1076.58550993586 52.264 2 0.016222762778009818 0.007869451813540807 0.9438714419765777 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1', 'SOAT1|p.R253Pfs*31|1|0.16|ENSG00000057252|chr1:179341284-179341285|-/C|frameshift_variant'] 32699 14264 GHSEVVAIL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 60.132 2 0.01620360445241262 0.007869451813540807 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 39180 5618 HLGALLAR True NCI_RA007_Epitope_Rep3 849.51847078713 849.51736993586 29.09 2 0.016164771183046284 0.007869451813540807 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 70201 21521 LYLPSFFTY True NCI_RA007_Epitope_Rep1 1149.57464825057 1149.57354993586 88.051 2 0.01616239463797573 0.007869451813540807 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 131230 18660 VVPQQLLTV True PC9_epitope_Rep6 995.60153170475 995.60042993586 84.419 2 0.01616000009507727 0.007869451813540807 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 28511 14125 FSGPAITL True H1975_Epitope_Rep3 804.43815477776 804.43760496793 59.661 1 0.01615403903974709 0.007869451813540807 0.9438714419765777 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 734 13909 AAVPGKTFVNI True PC9_epitope_Rep6 1115.63389446219 1115.63278993586 65.34 2 0.016151042646720223 0.007869451813540807 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 84052 8837 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57797496793 38.914 1 0.016142035517248098 0.007869451813540807 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 131117 9150 VVNPLFEK True NCI_RA007_Epitope_Rep5 944.53311779176 944.53202993586 41.844 2 0.01613336540992144 0.007869451813540807 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF', 'ENST00000468834.1_1_10:33346560-33347304:-|nuORF', 'ENST00000434317.1_1_7:102395625-102396051:+|nuORF', 'ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 8717 17888 AVDLTLPKV True PC9_epitope_Rep4 954.57498260374 954.57388993586 76.845 2 0.016126118619304925 0.007869451813540807 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF', 'ENST00000518193.1_1_8:63767865-63768189:-|nuORF'] 24474 19891 FAIDPHLLL True PC9_epitope_Rep6 1037.59096702105 1037.5898699358602 89.165 2 0.01609288835855258 0.007886646170298089 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 71404 22658 MIIPSLEEL True PC9_epitope_Rep2 1043.5572839342701 1043.5561899358602 92.651 2 0.016078329917128268 0.007886646170298089 0.9438714419765777 ['NUSAP1-RTF1|1|fusion', 'ENST00000558123.5_1_15:41625155-41634596:+|nuORF', 'nc|ENSG00000137804|Q9BXS6-7|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-4|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-6|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-3|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-5|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-2|NUSAP1', 'ENSG00000137804|ENST00000559596|NUSAP1'] 103571 12845 SRDEYYHLL True PC9_epitope_Rep4 1194.56693710118 1194.5658499358601 57.273 2 0.01606530392208221 0.007886646170298089 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 118117 21405 VAVAGLLTV True PC9_epitope_Rep5 841.52730413533 841.5267549679301 87.398 1 0.016063706304870563 0.007886646170298089 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 128760 4985 VSQEPFPNK True NCI_RA007_Epitope_Rep5 1044.5240096600398 1044.52290993586 25.879 2 0.016044541612819 0.007886646170298089 0.9438714419765777 ['ENSG00000134986|ENST00000257435|NREP', 'ENST00000507742.5_1_5:111066620-111092910:-|nuORF', 'nc|ENSG00000134986|Q16612-2|NREP'] 48367 8432 KEAIETIVA True H1975_Epitope_Rep2 972.5491617787198 972.54806993586 37.385 2 0.01603975917809057 0.007886646170298089 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 48502 8173 KEFIKIVEA True NCI_RA007_Epitope_Rep5 1075.62774645259 1075.62664993586 38.12 2 0.01603346753058029 0.007886646170298089 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF'] 114749 11397 TSVPPGSAL True PC9_epitope_Rep1 827.4388830537499 827.43778993586 48.718 2 0.016021153513072515 0.007886646170298089 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'nc|ENSG00000181555|Q9BYW2-2|SETD2'] 102701 16520 SQDPTMIGV True PC9_epitope_Rep5 946.44298245802 946.44243496793 68.544 1 0.015997949457283143 0.007886646170298089 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 84248 5433 QEVPGPAA True H1975_Epitope_Rep2 767.3813681776298 767.3808149679301 25.924 1 0.015991235594809878 0.007886646170298089 0.9438714419765777 ['ENSG00000146278|ENST00000336032|PNRC1'] 1778 9658 AEHPIVIVC True NCI_RA007_Epitope_Rep3 979.5160878286299 979.51498993586 45.068 2 0.01596594795837232 0.007886646170298089 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37', 'DHX37|p.E276K|1|0.23|ENSG00000150990|chr12:124977403-124977403|C/T|missense_variant'] 132583 5473 VYPPIRHHL True NCI_RA007_Epitope_Rep4 1130.6348975217 1130.63326490379 27.636 3 0.015940985678706776 0.007886646170298089 0.9438714419765777 ['nc|ENSG00000155975|Q8NEZ2-3|VPS37A', 'ENSG00000155975|ENST00000324849|VPS37A', 'nc|ENSG00000155975|Q8NEZ2-2|VPS37A'] 105498 13787 SVDDTIVAL True NCI_RA007_Epitope_Rep3 931.4862271689899 931.48512993586 61.56 2 0.015922840327776886 0.007886646170298089 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 123318 13287 VHTDCIVSV True PC9_epitope_Rep5 971.47461693947 971.47350993586 56.118 2 0.015919669983304307 0.007886646170298089 0.9438714419765777 ['ENSG00000119906|ENST00000238961|SLF2', 'nc|ENSG00000119906|Q8IX21-2|SLF2'] 15027 6206 EAAAAVVAA True H1975_Epitope_Rep2 771.41266830591 771.41211496793 28.843 1 0.01591722291072893 0.007886646170298089 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000398654.7_1_18:44497289-44497409:-|nuORF', 'LRRCC1|p.K405Nfs*4|2|0.32|ENSG00000133739|chr8:85124882-85124883|GC/-|frameshift_variant', 'LRRCC1|p.P406Afs*4|2|0.21|ENSG00000133739|chr8:85124877-85124878|-/A|frameshift_variant', 'ENSG00000133739|ENST00000360375|LRRCC1'] 1499 6277 AEEPASVTP True H1975_Epitope_Rep2 899.42362691243 899.42307496793 29.088 1 0.015916181524504292 0.007886646170298089 0.9438714419765777 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF'] 124635 20258 VLIDDLTTL True PC9_epitope_Rep6 1001.56447748969 1001.56338993586 90.608 2 0.015912751003515142 0.007886646170298089 0.9438714419765777 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'ENST00000370308.8_1_6:74189644-74210455:+|nuORF', 'nc|ENSG00000135297|Q9Y2Z2-2|MTO1'] 23630 19908 EYFSYPVSL True PC9_epitope_Rep6 1103.51752729727 1103.5169749679299 89.231 1 0.015911775123026346 0.007886646170298089 0.9438714419765777 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 82360 6883 PTTLPTSTG True H1975_Epitope_Rep3 873.44436235701 873.44381496793 31.434 1 0.015905843365699397 0.007886646170298089 0.9438714419765777 ['ZNF544|p.L412Tfs*29|1|0.22|ENSG00000198131|chr19:58261839-58261840|-/A|frameshift_variant', 'ENSG00000198131|ENST00000687789|ZNF544'] 39083 17850 HLAENLVVI True PC9_epitope_Rep2 1006.58113061334 1006.58002993586 73.961 2 0.015905552510103765 0.007886646170298089 0.9438714419765777 ['ACTR10|p.Q298H|1|0.25|ENSG00000131966|chr14:58232089-58232089|A/T|missense_variant'] 46887 16333 IVIDPKNPL True PC9_epitope_Rep5 1007.60153170475 1007.60042993586 67.822 2 0.015901168530717172 0.007886646170298089 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 2773 7561 AEVDAAMAA True H1975_Epitope_Rep3 847.3745685450299 847.3740149679301 34.065 1 0.015891074739629973 0.007886646170298089 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 105548 7625 SVDPTQTEY True H1975_Epitope_Rep3 1038.45056993626 1038.4499749679298 34.312 1 0.015879209548473702 0.007886646170298089 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 99086 17509 SLADLQNDEV True PC9_epitope_Rep2 1102.5142328219802 1102.5131299358602 72.606 2 0.015877861311897234 0.007886646170298089 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF'] 123068 15373 VHAEEVIVL True PC9_epitope_Rep4 1007.5651461960299 1007.56404993586 67.065 2 0.01587104849876539 0.007886646170298089 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'KDM3B|p.A1619Rfs*25|1|0.09|ENSG00000120733|chr5:138429926-138429927|-/C|frameshift_variant'] 1424 7716 AEEGPPLGA True H1975_Epitope_Rep2 839.4024975450299 839.40140993586 34.632 2 0.01585136221255516 0.007886646170298089 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 97401 7078 SGEVLVNVK True NCI_RA007_Epitope_Rep2 943.53384606775 943.53274993586 32.156 2 0.015836633061772933 0.007886646170298089 0.9438714419765777 ['ENSG00000084623|ENST00000677711|EIF3I', 'ENST00000474371.1_1_1:32689659-32696621:+|nuORF'] 78173 6272 PAPPPPPPP True NCI_RA007_Epitope_Rep3 865.46978925921 865.46868993586 31.673 2 0.015834323445354917 0.007886646170298089 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 101600 9716 SPFAEGTSA True PC9_epitope_Rep3 865.38176210045 865.3806699358599 42.326 2 0.015818725246525854 0.007886646170298089 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 136402 8006 YHEHQANLL True PC9_epitope_Rep5 1123.5410567065098 1123.53940490379 35.733 3 0.015805023861528895 0.007907691622301918 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 114984 14300 TTISRFEAL True PC9_epitope_Rep4 1036.5553097883198 1036.5542099358602 62.905 2 0.015774492979465083 0.007907691622301918 0.9438714419765777 ['nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000028277|P09086-4|POU2F2', 'ENST00000559648.1_1_1:167358914-167365774:+|nuORF', 'nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1', 'nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3', 'ENST00000533620.5_1_11:120169092-120189098:+|nuORF'] 31438 5219 GEDPTAAAP True H1975_Epitope_Rep2 827.3661120363099 827.36556496793 25.142 1 0.015773962004061542 0.007907691622301918 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 96052 3697 SEAPPTNQA True H1975_Epitope_Rep1 913.41412485789 913.41302993586 18.698 2 0.01576939149341124 0.007907691622301918 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 48937 6317 KEYDVAVEA True NCI_RA007_Epitope_Rep5 1022.4920408254197 1022.4909499358599 30.976 2 0.01576807649683059 0.007907691622301918 0.9438714419765777 ['STAG1|p.G456Efs*41|1|0.16|ENSG00000118007|chr3:136452094-136452094|C/-|frameshift_variant', 'nc|ENSG00000118007|Q8WVM7-2|STAG1', 'ENSG00000118007|ENST00000383202|STAG1'] 132923 21910 VYTVVDEMF True PC9_epitope_Rep2 1101.5052483614097 1101.50467496793 89.753 1 0.015734326460682006 0.007907691622301918 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 76955 21019 NVPEGLLATV True PC9_epitope_Rep3 1011.56006081559 1011.5594749679301 86.127 1 0.015724434770744363 0.007907691622301918 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 138793 17054 YSDFFTDCY True H1975_Epitope_Rep2 1159.41682727983 1159.41572993586 70.857 2 0.01566762929576811 0.007929613542710769 0.9438714419765777 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 23516 18610 EWLSFGHKF True PC9_epitope_Rep5 1149.56072952193 1149.55909490379 76.608 3 0.0156364340578046 0.007929613542710769 0.9438714419765777 ['ENSG00000133812|ENST00000256190|SBF2'] 73027 13832 NDEELNKLLGR True PC9_epitope_Rep4 1299.67827845531 1299.67663490379 61.102 3 0.015620839483153372 0.007951356407857811 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4'] 11884 15777 DHNYQSYIL True PC9_epitope_Rep6 1151.52473793603 1151.52364993586 72.933 2 0.015620771354710723 0.007951356407857811 0.9438714419765777 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000561922.1_1_16:67270489-67272168:-|nuORF'] 31733 7204 GEKALLVSA True H1975_Epitope_Rep3 886.5123823471799 886.51128993586 32.685 2 0.015598886152615378 0.007951356407857811 0.9438714419765777 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-6|USP48', 'ENST00000464577.1_1_1:22013654-22030763:-|nuORF'] 72342 18628 MTDLYPPELF True H1975_Epitope_Rep3 1224.5736622744 1224.5725699358602 78.114 2 0.015584783130466549 0.00797203108646759 0.9438714419765777 ['ENSG00000148291|ENST00000371964|SURF2'] 36297 5350 GVGPVPARA True PC9_epitope_Rep2 822.47118624154 822.47008993586 25.966 2 0.015551521946435398 0.00797203108646759 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 70471 16797 LYSEVSHLL True PC9_epitope_Rep6 1059.56006081559 1059.5589699358602 77.115 2 0.015550481504422934 0.00797203108646759 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 96341 9080 SEFGKIYGP True NCI_RA007_Epitope_Rep3 996.4916469025998 996.49054993586 42.803 2 0.015525656669586689 0.00797203108646759 0.9438714419765777 ['ENSG00000082781|ENST00000296181|ITGB5'] 6624 17054 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 78.163 2 0.01550991480481502 0.00797203108646759 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 2645 13067 AESVLAVVA True H1975_Epitope_Rep3 857.4858332461699 857.48528496793 55.504 1 0.015508524092709038 0.00797203108646759 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 119707 11220 VETDSEEVY True H1975_Epitope_Rep2 1069.44515020265 1069.4445749679298 48.199 1 0.015485924541276785 0.00797203108646759 0.9438714419765777 ['MCTP2|p.A123V|1|0.28|ENSG00000140563|chr15:94298633-94298633|C/T|missense_variant'] 2690 8239 AETDVVNSV True H1975_Epitope_Rep3 932.4450906330001 932.44398993586 36.674 2 0.015470530938709239 0.00797203108646759 0.9438714419765777 ['ENSG00000106524|ENST00000306999|ANKMY2'] 115591 23708 TVIDQIPFLAV True PC9_epitope_Rep5 1214.6910749851402 1214.68996993586 96.173 2 0.015468008801598798 0.00797203108646759 0.9438714419765777 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 64537 5904 LRDEHNYTL True PC9_epitope_Rep6 1159.56218607391 1159.56055490379 30.976 3 0.015448244429343795 0.007991985752448798 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 8821 14630 AVFPSIVG True H1975_Epitope_Rep2 788.4432401582 788.44269496793 61.433 1 0.015448068022269307 0.007991985752448798 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 107093 21733 SYMFVDENTF True PC9_epitope_Rep3 1251.5117902938298 1251.51068993586 88.89 2 0.015435879578669045 0.007991985752448798 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 101909 12349 SPLLLQAKA True PC9_epitope_Rep3 939.5753169569099 939.57420993586 52.529 2 0.015421270730933943 0.007991985752448798 0.9438714419765777 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 42567 11118 IESPPAFTA True H1975_Epitope_Rep2 931.46509780159 931.46400993586 47.8 2 0.015394689183421517 0.007991985752448798 0.9438714419765777 ['ENSG00000152382|ENST00000367874|TADA1'] 135038 12368 YAIGNAPEL True H1975_Epitope_Rep3 946.4759968384599 946.47488993586 52.76 2 0.015392188340500816 0.007991985752448798 0.9438714419765777 ['BAP1|p.V386Efs*45|1|0.21|ENSG00000163930|chr3:52404546-52404547|-/CT|frameshift_variant', 'ENSG00000163930|ENST00000460680|BAP1'] 136807 20703 YITDLFQVL True NCI_RA007_Epitope_Rep4 1110.59611197114 1110.5950099358602 89.694 2 0.01538347121799399 0.007991985752448798 0.9438714419765777 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'ENST00000313754.4_1_3:94225612-94226386:-|nuORF', 'nc|ENSG00000170632|Q8N2F6-5|ARMC10'] 30227 20928 GAAAFFTAV True PC9_epitope_Rep2 853.4334037504899 853.4328549679301 85.946 1 0.015363090306509024 0.007991985752448798 0.9438714419765777 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 36298 5946 GVGPVPARA True PC9_epitope_Rep3 822.47118624154 822.47008993586 27.929 2 0.015338419820678415 0.007991985752448798 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 102247 10547 SPTELPSA True PC9_epitope_Rep5 800.39159850816 800.39050993586 45.558 2 0.015334859661185413 0.007991985752448798 0.9438714419765777 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11', 'ENST00000488544.1_1_20:3209968-3210393:-|nuORF'] 116608 18418 TYGKIDLGF True PC9_epitope_Rep4 1012.5229470308799 1012.52184993586 78.912 2 0.015326660863430824 0.007991985752448798 0.9438714419765777 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 111335 23983 TLIEDILGV True PC9_epitope_Rep3 971.5539128059899 971.55280993586 97.537 2 0.015322463536322155 0.007991985752448798 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 95143 7762 SAAAALVLK True NCI_RA007_Epitope_Rep4 842.52255310806 842.52144993586 36.536 2 0.015287736389526841 0.007991985752448798 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 63858 8486 LPTTNSGVSA True PC9_epitope_Rep2 945.47672511445 945.47562993586 38.007 2 0.015276040971983445 0.00801068090787717 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 107359 12322 SYSGTFHSL True PC9_epitope_Rep1 997.4505103666099 997.44940993586 52.251 2 0.01523416739339739 0.00801068090787717 0.9438714419765777 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1'] 37522 4937 GYKAGMTHI True NCI_RA007_Epitope_Rep4 976.4800366730799 976.47892993586 25.452 2 0.015221348338520445 0.00801068090787717 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000484615.5_1_22:39713464-39715605:-|nuORF', 'ENST00000460589.5_1_22:39713464-39715412:-|nuORF', 'ENST00000465618.5_1_22:39712851-39715803:-|nuORF', 'ENST00000467870.1_1_14:57445264-57445663:+|nuORF', 'ENST00000413027.1_1_6:31248141-31248948:+|nuORF', 'ENST00000461967.1_1_22:39714348-39714516:-|nuORF'] 131492 11369 VVVATIKSV True PC9_epitope_Rep1 914.5800679841799 914.57896993586 48.611 2 0.01516980535425425 0.00801068090787717 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1', 'nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 61853 19720 LLLDVPTAAV True PC9_epitope_Rep6 1010.6011973515799 1010.6006749679301 88.512 1 0.01515982711266486 0.00801068090787717 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 293 10522 AAHIFNEAL True NCI_RA007_Epitope_Rep4 984.50288029264 984.50178993586 47.32 2 0.015143564306854708 0.00801068090787717 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 98082 3739 SHVSGTTTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 20.526 2 0.015139978817554484 0.00801068090787717 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant', 'ENST00000478443.1_1_17:20910195-20914666:-|nuORF'] 113491 15460 TQSELATAL True PC9_epitope_Rep5 932.4814761417199 932.48092496793 64.477 1 0.015138421853692612 0.00801068090787717 0.9438714419765777 ['ENSG00000138629|ENST00000395081|UBL7'] 1231 9694 AEDGYSGVEV True H1975_Epitope_Rep2 1024.4349198721197 1024.43437496793 42.269 1 0.015121690284244938 0.00801068090787717 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 31711 10036 GEIPKVLVA True NCI_RA007_Epitope_Rep5 924.5644179200399 924.56332993586 45.242 2 0.015114831881598342 0.00801068090787717 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'AP2A2-PSMD13|2|fusion', 'AP2A2-PSMD13|3|fusion', 'AP2A2-PSMD13|1|fusion', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 106784 14658 SYGDILHVI True NCI_RA007_Epitope_Rep4 1015.53384606775 1015.53274993586 63.791 2 0.015089615153921637 0.00801068090787717 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 70435 17402 LYRLKFNEF True PC9_epitope_Rep2 1228.6604435632 1228.65934993586 72.196 2 0.015089532741502279 0.00801068090787717 0.9438714419765777 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 100332 14296 SLMKDFPGA True PC9_epitope_Rep4 964.4688032830398 964.46770993586 62.89 2 0.015086153897040499 0.00801068090787717 0.9438714419765777 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2'] 87866 21811 QVLEELTEL True PC9_epitope_Rep1 1072.5652057656798 1072.5641099358602 88.707 2 0.01505688612116456 0.00801068090787717 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'ENSG00000131459|ENST00000253778|GFPT2'] 38870 18578 HIIENIVAV True PC9_epitope_Rep1 1006.58113061334 1006.58057496793 76.247 1 0.014987910268774279 0.00801068090787717 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 8827 20469 AVFPSIVG True PC9_epitope_Rep2 788.4432401582 788.44269496793 84.163 1 0.01498502853081962 0.00801068090787717 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 31014 22417 GAVDPLLAL True PC9_epitope_Rep1 867.50656869075 867.5060249679301 91.047 1 0.014983581964000028 0.00801068090787717 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 47085 12221 IVVGRITEV True PC9_epitope_Rep6 984.5967806774798 984.59568993586 58.38 2 0.014947817234220765 0.00801068090787717 0.9438714419765777 ['ENSG00000130713|ENST00000372358|EXOSC2', 'EXOSC2|p.F219Lfs*12|1|0.28|ENSG00000130713|chr9:130702286-130702287|-/G|frameshift_variant', 'nc|ENSG00000130713|Q13868-2|EXOSC2', 'ENST00000463488.1_1_9:133569202-133574940:+|nuORF'] 76926 17329 NVLYENPNL True PC9_epitope_Rep4 1074.53457434374 1074.53346993586 74.662 2 0.014942277329034883 0.00801068090787717 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 71945 18264 MPTLPPPSV True PC9_epitope_Rep4 937.49428975489 937.49318993586 78.322 2 0.014916836837288845 0.00801068090787717 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 102293 9037 SPVDYGTSA True PC9_epitope_Rep3 895.39232678415 895.39122993586 39.703 2 0.014888099256315299 0.008026146115878874 0.9438714419765777 ['ENSG00000149658|ENST00000370339|YTHDF1'] 43534 13422 IIDNSQGF True PC9_epitope_Rep5 892.4290466460399 892.4279499358599 56.643 2 0.014885237136145618 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1'] 63033 14164 LNIPVREVP True PC9_epitope_Rep6 1035.6076797143498 1035.60658993586 66.355 2 0.014879481669793977 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000007516|O94812-5|BAIAP3', 'nc|ENSG00000007516|O94812-3|BAIAP3', 'ENSG00000007516|ENST00000426824|BAIAP3', 'nc|ENSG00000007516|O94812-2|BAIAP3', 'nc|ENSG00000007516|O94812|BAIAP3'] 102717 10648 SQDSTAVAL True PC9_epitope_Rep4 890.4345259492999 890.43342993586 48.708 2 0.014874272976511047 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 137494 21131 YLPPGFLSA True PC9_epitope_Rep3 963.50656869075 963.50546993586 86.564 2 0.014851202189564766 0.008026146115878874 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 47092 10482 IVVNLTGR True PC9_epitope_Rep4 870.5287011176599 870.52760993586 48.035 2 0.014850887185853473 0.008026146115878874 0.9438714419765777 ['ENSG00000134419|ENST00000322989|RPS15A', 'ENST00000569365.6_1_16:18794333-18800349:-|nuORF', 'ENST00000449387.1_1_11:28308937-28309159:-|nuORF'] 63983 18522 LQAPELANV True PC9_epitope_Rep2 953.5181960036099 953.51708993586 76.589 2 0.014847448830324506 0.008026146115878874 0.9438714419765777 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 109197 8172 TFSVVPSPK True H1975_Epitope_Rep1 960.5280324113198 960.52692993586 36.374 2 0.014832048985468227 0.008026146115878874 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000545422.1_1_12:25593812-25593941:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 46520 6780 ITQGTPLKY True H1975_Epitope_Rep1 1019.5651461960299 1019.56404993586 31.123 2 0.014828323053866915 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.D1460N|1|0.44|ENSG00000196498|chr12:124344933-124344933|C/T|missense_variant'] 85080 17444 QIPQVLNQV True PC9_epitope_Rep6 1037.58694426977 1037.58584993586 79.715 2 0.014795925287643223 0.008026146115878874 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7'] 34627 19350 GQIEVVPEV True PC9_epitope_Rep5 968.5178616504398 968.51731496793 79.476 1 0.014794102406680299 0.008026146115878874 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 128818 4370 VSRVESVPK True NCI_RA007_Epitope_Rep3 999.5712942056299 999.57018993586 23.958 2 0.014776611184075712 0.008026146115878874 0.9438714419765777 ['ENSG00000177992|ENST00000325643|SPATA31E1', 'SPATA31E1|p.P892H|1|0.31|ENSG00000177992|chr9:87887162-87887162|C/A|missense_variant'] 77304 15679 NYKKFYEAF True PC9_epitope_Rep1 1208.5866099165999 1208.58550993586 65.131 2 0.014762995292432262 0.008026146115878874 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 106013 18924 SVLNELPSA True PC9_epitope_Rep2 928.48656152216 928.48601496793 78.155 1 0.01476004940599481 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000167608|Q7Z404|TMC4', 'TMC4|p.V56Cfs*94|1|0.22|ENSG00000167608|chr19:54172015-54172015|C/-|frameshift_variant', 'nc|ENSG00000167608|Q7Z404-1|TMC4', 'ENSG00000167608|ENST00000619895|TMC4'] 81426 6851 PQEEAPEV True H1975_Epitope_Rep2 897.4079768482899 897.40686993586 31.271 2 0.014757153632028532 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 84125 12274 QEQLRLQLP True H1975_Epitope_Rep2 1123.6349570913499 1123.63386993586 52.296 2 0.01474894064367219 0.008026146115878874 0.9438714419765777 ['KIAA0907-UBQLN4|1|fusion', 'ENSG00000160803|ENST00000368309|UBQLN4'] 54641 17213 LADPSAFVAA True PC9_epitope_Rep6 960.4916469025999 960.49054993586 78.799 2 0.014742199537555166 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000213553|Q8NHW5|RPLP0P6', 'ENSG00000089157|ENST00000392514|RPLP0', 'nc|ENSG00000089157|P05388-2|RPLP0', 'ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 1427 7619 AEEGPPLGA True H1975_Epitope_Rep3 839.4024975450299 839.40140993586 34.287 2 0.014733923416564206 0.008026146115878874 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 129286 5103 VTDRSDARLQY True H1975_Epitope_Rep1 1322.6578773638998 1322.6562449037901 24.699 3 0.01472093762342397 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000117362|Q96BI3-2|APH1A', 'ENSG00000117362|ENST00000369109|APH1A'] 130738 10906 VVDPNDPQM True PC9_epitope_Rep1 1013.44879611445 1013.44827496793 46.834 1 0.01472042252790343 0.008026146115878874 0.9438714419765777 ['ENSG00000151883|ENST00000281631|PARP8'] 134103 12119 WQYRQLSAL True NCI_RA007_Epitope_Rep5 1163.60874234351 1163.60764993586 53.27 2 0.014717157400930752 0.008026146115878874 0.9438714419765777 ['ENSG00000174748|ENST00000307839|RPL15', 'nc|ENSG00000174748|P61313-2|RPL15'] 53499 17658 KVLNELTQL True PC9_epitope_Rep1 1056.6179100448799 1056.6168099358601 72.716 2 0.014695820403784272 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 129058 9431 VTANTMENV True PC9_epitope_Rep4 977.44879611445 977.44768993586 43.886 2 0.0146832116746287 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 109903 4305 THNPTNATL True PC9_epitope_Rep4 967.47230844035 967.47120993586 22.971 2 0.014680675423568004 0.008026146115878874 0.9438714419765777 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184007|Q12974-3|PTP4A2', 'nc|ENSG00000184489|O75365-2|PTP4A3', 'ENSG00000184007|ENST00000647444|PTP4A2', 'ENSG00000112245|ENST00000626021|PTP4A1', 'PTP4A3|p.T32A|1|0.44|ENSG00000184489|chr8:141422334-141422334|A/G|missense_variant', 'ENST00000590314.1_1_17:40685554-40685683:+|nuORF', 'ENST00000484483.1_1_1:32381486-32384666:-|nuORF', 'nc|ENSG00000184007|Q12974-2|PTP4A2', 'nc|ENSG00000184007|Q12974-4|PTP4A2'] 69053 20241 LVIGQFLEA True PC9_epitope_Rep6 988.5593325395998 988.55822993586 90.541 2 0.014663833097224807 0.008026146115878874 0.9438714419765777 ['ENST00000596386.1_1_19:40477100-40485896:+|nuORF', 'ENST00000593455.5_1_19:40477100-40486089:+|nuORF', 'nc|ENSG00000013275|P43686-2|PSMC4', 'ENSG00000013275|ENST00000157812|PSMC4', 'ENST00000601697.5_1_19:40477100-40486546:+|nuORF'] 26388 22081 FIISDFESV True PC9_epitope_Rep2 1055.5175272972701 1055.51642993586 90.406 2 0.01466169972700341 0.008026146115878874 0.9438714419765777 ['ENSG00000164307|ENST00000443439|ERAP1', 'nc|ENSG00000164307|Q9NZ08-2|ERAP1', 'ERAP1|p.N856Kfs*10|1|0.12|ENSG00000164307|chr5:96781078-96781079|-/T|frameshift_variant'] 57046 8015 LEEGEGPIA True H1975_Epitope_Rep3 913.4392769765699 913.43872496793 35.802 1 0.01465509384633062 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000509178.5_1_5:134117763-134126202:+|nuORF'] 70365 20126 LYQDGVFKF True PC9_epitope_Rep1 1115.56514619603 1115.56404993586 82.245 2 0.014637736036367944 0.008026146115878874 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 85824 18365 QMISRIEYI True PC9_epitope_Rep3 1151.60088008175 1151.5997899358601 75.852 2 0.014616038746776899 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000578904.1_1_17:80208040-80213403:-|nuORF', 'ENSG00000213923|ENST00000396832|CSNK1E'] 136695 20590 YIGPVLVSV True PC9_epitope_Rep4 945.55351888317 945.55297496793 87.352 1 0.014600844571122045 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 120447 10369 VFTTGFSR True PC9_epitope_Rep2 913.4657665079299 913.46466993586 45.209 2 0.014594917736627664 0.008026146115878874 0.9438714419765777 ['ENST00000453768.6_1_11:67208484-67210099:-|nuORF', 'ENSG00000172725|ENST00000341356|CORO1B', 'ENST00000547361.1_1_12:109046046-109052582:-|nuORF', 'ENST00000552030.5_1_12:109042755-109052582:-|nuORF', 'ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 47457 21089 IYIWDLNNF True NCI_RA007_Epitope_Rep1 1196.5866099165999 1196.58550993586 86.288 2 0.014575078098082495 0.008026146115878874 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 7954 17377 ATDIPCLLY True H1975_Epitope_Rep2 1007.4997690581499 1007.49866993586 72.133 2 0.014552675463639501 0.008026146115878874 0.9438714419765777 ['ENSG00000135249|ENST00000257700|RINT1', 'ENST00000474123.1_1_7:105190513-105195680:+|nuORF'] 105020 5898 STIKEVAQA True PC9_epitope_Rep1 945.5131106231698 945.51200993586 27.502 2 0.014546745301534518 0.008026146115878874 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 4774 11782 ALEESCEAL True PC9_epitope_Rep5 963.4219126602699 963.42080993586 50.317 2 0.014543002828570867 0.008026146115878874 0.9438714419765777 ['ADGRL3|p.V569L|1|0.14|ENSG00000150471|chr4:61892880-61892880|G/T|missense_variant'] 135811 12669 YEPPVQESV True PC9_epitope_Rep4 1046.49204082542 1046.49094993586 56.577 2 0.014534844826214356 0.008026146115878874 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 70942 4203 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 21.274 2 0.014524294951792268 0.008026146115878874 0.9438714419765777 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 3369 18229 AGIKEYFNV True PC9_epitope_Rep1 1039.53384606775 1039.53274993586 74.908 2 0.01451071262931729 0.008026146115878874 0.9438714419765777 ['ENSG00000123562|ENST00000441076|MORF4L2', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000525966.1_1_11:14695245-14695548:-|nuORF'] 96392 15098 SEHWLVLVP True NCI_RA007_Epitope_Rep3 1078.5811306133398 1078.58002993586 66.874 2 0.014495090680016804 0.008035516093229745 0.9438714419765777 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 87973 12277 QVRDVIIAA True PC9_epitope_Rep5 983.5763795860698 983.57528993586 52.212 2 0.014490399969464511 0.008035516093229745 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 102149 8091 SPRNLAMEA True PC9_epitope_Rep5 987.4807649490699 987.47966993586 36.06 2 0.014487460260724519 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D'] 8367 19246 ATMPVVPSV True PC9_epitope_Rep5 899.4786396907499 899.47754993586 79.068 2 0.01446983854392976 0.008035516093229745 0.9438714419765777 ['ENSG00000148341|ENST00000372564|SH3GLB2', 'nc|ENSG00000148341|Q9NR46-2|SH3GLB2', 'ENST00000479237.5_1_9:131770965-131773053:-|nuORF', 'ENST00000461811.5_1_9:131770965-131772716:-|nuORF'] 26353 18457 FIGAGAATVGV True PC9_epitope_Rep2 961.5232813840499 961.52218993586 76.328 2 0.014456235984627445 0.008035516093229745 0.9438714419765777 ['ENST00000497075.5_1_2:176043783-176046391:-|nuORF', 'ENST00000513781.5_1_17:46970480-46973128:+|nuORF', 'ENST00000502964.5_1_17:46971694-46973128:+|nuORF', 'ENSG00000159199|ENST00000393366|ATP5MC1', 'ENSG00000135390|ENST00000394349|ATP5MC2', 'ENSG00000154518|ENST00000284727|ATP5MC3', 'nc|ENSG00000135390|Q06055-3|ATP5MC2', 'nc|ENSG00000135390|Q06055-2|ATP5MC2'] 113684 16690 TRDENPFASL True PC9_epitope_Rep4 1148.5462016565998 1148.5451099358602 72.172 2 0.014451818045299917 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B'] 63042 9249 LNKEVSTI True PC9_epitope_Rep1 902.50729696674 902.50618993586 40.428 2 0.01443232098515209 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000268758|Q86SQ3|ADGRE4P'] 125372 4968 VLSSIEQK True PC9_epitope_Rep1 902.50729696674 902.50618993586 23.969 2 0.014429388343805104 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 27963 21256 FQSPPIVEL True PC9_epitope_Rep5 1028.5542471591598 1028.5531499358601 86.813 2 0.014419889283768021 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 17334 2618 EHDPVGQM[Oxidation]V True PC9_epitope_Rep2 1026.4440454676198 1026.44294993586 14.726 2 0.014415960134951635 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'ENST00000469700.1_1_20:47707305-47712721:+|nuORF'] 11909 4581 DHSDAGADELG True NCI_RA007_Epitope_Rep4 1085.42614609357 1085.4250499358602 24.025 2 0.014407963204579665 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENST00000497538.1_1_3:155705188-155705881:+|nuORF'] 115063 17097 TTSDIDYAL True PC9_epitope_Rep4 997.46040634397 997.45985496793 73.762 1 0.014400492492969314 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 115565 7422 TVIAKVNNV True PC9_epitope_Rep2 956.5654805492 956.56438993586 33.924 2 0.014397432236622744 0.008035516093229745 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 12518 15179 DLAGSIIGK True PC9_epitope_Rep5 872.4967322830399 872.49562993586 63.394 2 0.014377833833797876 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 129220 8773 VTDLAGNEY True H1975_Epitope_Rep2 980.4450906330001 980.44398993586 38.709 2 0.014364063962440674 0.008035516093229745 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 12363 18738 DIYLPIANV True H1975_Epitope_Rep2 1016.55424715916 1016.55314993586 77.781 2 0.014358958368561117 0.008035516093229745 0.9438714419765777 ['ENSG00000120837|ENST00000240055|NFYB'] 39099 14286 HLAVLTNL True PC9_epitope_Rep4 879.51780208079 879.51670993586 62.852 2 0.014341874562689622 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF'] 6897 14097 AQIKPFYTV True PC9_epitope_Rep6 1065.5858816406098 1065.58478993586 66.096 2 0.01434075403228308 0.008035516093229745 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 83229 12309 QAALEFHGV True PC9_epitope_Rep6 970.4872302284999 970.48612993586 58.74 2 0.014340043771995572 0.008035516093229745 0.9438714419765777 ['ENSG00000187231|ENST00000428443|SESTD1'] 118093 9276 VATVSLPR True PC9_epitope_Rep2 841.5021520166499 841.50104993586 41.02 2 0.014331209842575212 0.008035516093229745 0.9438714419765777 ['CON__P00761'] 23533 17938 EWSPYTKIFQF True NCI_RA007_Epitope_Rep1 1444.7027022979998 1444.70160993586 73.911 2 0.014317185075095974 0.008035516093229745 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 70798 10432 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 45.142 2 0.014307421429491117 0.008035516093229745 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 41287 17304 IAGPVLLI True H1975_Epitope_Rep1 794.5265758593399 794.5260249679301 72.02 1 0.014274060432520818 0.008035516093229745 0.9438714419765777 ['ENSG00000243279|ENST00000553851|PRAF2'] 91570 7494 RPALVEQTAA True PC9_epitope_Rep5 1054.57710786206 1054.5760099358602 33.775 2 0.0142637606623585 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 31778 12918 GELPAWAA True H1975_Epitope_Rep3 813.40210362221 813.4015549679301 54.918 1 0.014256306667551804 0.008035516093229745 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 119371 7386 VENPGGYVA True H1975_Epitope_Rep2 904.42904664604 904.4279499358599 33.35 2 0.014214549200606628 0.008035516093229745 0.9438714419765777 ['TFRC-TCTEX1D2|1|fusion', 'ENSG00000072274|ENST00000360110|TFRC'] 113769 5517 TRDPQFQKL True PC9_epitope_Rep6 1131.6036569630699 1131.6020249037902 29.209 3 0.014213835856156294 0.008035516093229745 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000589504.1_1_19:34856171-34859700:+|nuORF', 'GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion'] 70793 9618 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 41.972 2 0.014195920561683088 0.008035516093229745 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 41073 11583 HYLDTTTLI True NCI_RA007_Epitope_Rep3 1075.55497543515 1075.5538699358601 52.69 2 0.014191865666304265 0.008035516093229745 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 5218 4260 ALQASALK True NCI_RA007_Epitope_Rep5 800.47560291564 800.4745099358599 22.956 2 0.01418383655874833 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 84747 11009 QHGPPNIVV True PC9_epitope_Rep5 959.51886470995 959.51776993586 47.335 2 0.014175667755343546 0.008035516093229745 0.9438714419765777 ['ENSG00000124209|ENST00000244040|RAB22A'] 115203 8456 TVAVGVIK True PC9_epitope_Rep1 785.50108938749 785.49998993586 37.362 2 0.014167041628407982 0.008035516093229745 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 35481 21589 GTFDIFYTA True PC9_epitope_Rep4 1033.4756624852898 1033.47456993586 91.224 2 0.014161694429973748 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 124268 14247 VLDDNRLLT True PC9_epitope_Rep4 1057.57677350889 1057.57566993586 62.707 2 0.014147974386338073 0.008035516093229745 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 6988 3816 AQQELEEQTR True NCI_RA007_Epitope_Rep2 1230.5840437172997 1230.5829499358601 19.477 2 0.014109344817591659 0.008035516093229745 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'ENST00000511640.1_1_5:25909808-25910855:+|nuORF'] 80657 16423 PLPPPLPPP True PC9_epitope_Rep6 923.54803957991 923.54694993586 75.575 2 0.014104049853161793 0.008035516093229745 0.9438714419765777 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 25205 8746 FEADPPGQVA True H1975_Epitope_Rep3 1029.47672511445 1029.47562993586 38.645 2 0.014103178815257874 0.008035516093229745 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 119749 5203 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44906993586 25.085 2 0.01409927354310063 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 87900 13881 QVMQGMGVSA True PC9_epitope_Rep1 1006.4575869763398 1006.45648993586 58.233 2 0.014071436871275832 0.008035516093229745 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 31701 9758 GEIINNTVP True NCI_RA007_Epitope_Rep4 955.4974605590301 955.49636993586 44.383 2 0.014061819112742534 0.008035516093229745 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000557781.5_1_12:57498159-57499088:-|nuORF'] 106686 10781 SYANVQDGF True NCI_RA007_Epitope_Rep5 999.4297749220299 999.42866993586 48.105 2 0.014050229638602441 0.008035516093229745 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 90316 18297 RIATLLQQV True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 75.584 2 0.014048911671329802 0.008035516093229745 0.9438714419765777 ['ENSG00000183665|ENST00000328599|TRMT12'] 96786 9524 SERELAALV True H1975_Epitope_Rep2 986.5396597241798 986.53856993586 41.605 2 0.014030888381529208 0.008035516093229745 0.9438714419765777 ['ENSG00000261308|ENST00000618634|FIGNL2'] 1805 11128 AEIDAITAP True H1975_Epitope_Rep2 899.46001242115 899.45890993586 47.839 2 0.014021438766385006 0.008035516093229745 0.9438714419765777 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENST00000533707.1_1_11:47774435-47776097:-|nuORF'] 23213 15907 EVQILGDQY True H1975_Epitope_Rep2 1063.51858992643 1063.51748993586 66.387 2 0.014011324893144227 0.008035516093229745 0.9438714419765777 ['ENSG00000173599|ENST00000393960|PC', 'nc|ENSG00000173599|P11498-2|PC'] 130 6149 AAAYPHTSL True NCI_RA007_Epitope_Rep3 929.46068112749 929.45958993586 31.181 2 0.014009239528273845 0.008035516093229745 0.9438714419765777 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 136477 11308 YHHGYSYIL True PC9_epitope_Rep4 1151.53999407735 1151.5388899358602 51.274 2 0.014004619556183946 0.008035516093229745 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 101610 9434 SPFENTENA True PC9_epitope_Rep5 1007.41960416115 1007.41850993586 41.243 2 0.01399097848349467 0.008035516093229745 0.9438714419765777 ['PPP6R3-LRP5|3|fusion', 'PPP6R3-LRP5|1|fusion', 'PPP6R3-LRP5|4|fusion', 'PPP6R3-LRP5|2|fusion', 'PPP6R3|p.L400F|1|0.27|ENSG00000110075|chr11:68569817-68569817|C/T|missense_variant', 'ENST00000526574.1_1_11:68334490-68338573:+|nuORF', 'RNF121-PPP6R3|1|fusion', 'RNF121-PPP6R3|4|fusion', 'RNF121-PPP6R3|3|fusion', 'nc|ENSG00000110075|Q5H9R7-3|PPP6R3', 'nc|ENSG00000110075|Q5H9R7-4|PPP6R3', 'nc|ENSG00000110075|Q5H9R7-6|PPP6R3', 'nc|ENSG00000110075|Q5H9R7-2|PPP6R3', 'ENSG00000110075|ENST00000393800|PPP6R3', 'RNF121-PPP6R3|2|fusion', 'nc|ENSG00000110075|Q5H9R7-5|PPP6R3'] 115716 11161 TVLERVEGA True PC9_epitope_Rep5 972.5240096600398 972.52290993586 47.917 2 0.013979494620021205 0.008035516093229745 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 64790 15055 LRVGEPVAL True PC9_epitope_Rep2 952.5705659296398 952.56946993586 63.167 2 0.01397839748031263 0.008035516093229745 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 136454 17110 YHGLTVPL True PC9_epitope_Rep5 898.4912529797799 898.49014993586 70.836 2 0.013975683084806406 0.008035516093229745 0.9438714419765777 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 128490 20087 VSFGDFVQV True PC9_epitope_Rep6 996.4916469025999 996.49054993586 89.94 2 0.013960167168507072 0.008035516093229745 0.9438714419765777 ['ENSG00000166263|ENST00000376352|STXBP4', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 20923 8275 EQVANSAFVER True PC9_epitope_Rep4 1248.6098645423197 1248.6087699358602 39.291 2 0.013953778452199514 0.008035516093229745 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 104664 9136 STAAKIMGV True PC9_epitope_Rep4 876.4738886634799 876.47278993586 42.732 2 0.013934929639606082 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31'] 94983 12082 RYQDAIRVF True PC9_epitope_Rep6 1166.6196413803798 1166.61854993586 57.796 2 0.013924498772635947 0.008035516093229745 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 69440 2617 LVRPPTEQA True PC9_epitope_Rep2 1009.55564414149 1009.55454993586 14.722 2 0.013920826271399844 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 89713 12073 REYQDLLNV True NCI_RA007_Epitope_Rep1 1148.5825871653199 1148.5820749679299 50.949 1 0.01391541104783209 0.008035516093229745 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM'] 31480 12727 GEELSPPLP True H1975_Epitope_Rep2 937.4756624852898 937.47511496793 54.057 1 0.013914102584974953 0.008035516093229745 0.9438714419765777 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 86490 13622 QQYNSFVSL True NCI_RA007_Epitope_Rep3 1084.5189242796 1084.5178299358602 60.883 2 0.013856582534760924 0.008035516093229745 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF', 'ENST00000592800.5_2_17:66526404-66526587:+|nuORF'] 25419 5593 FEKPDSVAA True H1975_Epitope_Rep3 962.4709114580198 962.46980993586 26.553 2 0.013848032260310993 0.008035516093229745 0.9438714419765777 ['ENST00000482023.5_1_1:249144411-249145095:-|nuORF', 'ENST00000533927.5_1_1:249144411-249149911:-|nuORF', 'nc|ENSG00000171163|Q9BU19-3|ZNF692', 'nc|ENSG00000171163|Q9BU19-2|ZNF692', 'ENSG00000171163|ENST00000306601|ZNF692', 'nc|ENSG00000171163|Q9BU19-5|ZNF692'] 37491 14422 GYEPPVQESV True PC9_epitope_Rep5 1103.51350454599 1103.5124099358602 60.473 2 0.013843082792818213 0.008035516093229745 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 124560 13849 VLGPDLKSV True PC9_epitope_Rep5 926.5436824754601 926.54258993586 58.29 2 0.01381681023255829 0.008035516093229745 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 126603 7584 VPPPPPIAR True PC9_epitope_Rep4 942.56508662638 942.56398993586 36.552 2 0.013816279026087182 0.008035516093229745 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 670 5408 AAVADPHSL True NCI_RA007_Epitope_Rep3 879.4450310633501 879.44392993586 28.285 2 0.013813412342765776 0.008035516093229745 0.9438714419765777 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000594962.5_1_19:17611587-17615418:+|nuORF', 'nc|ENSG00000130304|Q6PCB7-2|SLC27A1'] 118822 5817 VEEGAPPPP True H1975_Epitope_Rep3 891.4337976733099 891.43324496793 27.4 1 0.013810504154338935 0.008035516093229745 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 125109 16603 VLPGVDALSNI True NCI_RA007_Epitope_Rep5 1096.61282466444 1096.61172993586 70.625 2 0.013789470971754213 0.008035516093229745 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 41729 11850 IDNNIEQISSY True NCI_RA007_Epitope_Rep3 1294.60411045554 1294.6030099358602 53.734 2 0.01377469680789858 0.008035516093229745 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 44531 18080 IPALDNFLDKL True H1975_Epitope_Rep3 1257.69688864157 1257.6957899358601 75.742 2 0.013772283922057668 0.008035516093229745 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 20560 18714 EQDPTNLYI True PC9_epitope_Rep4 1091.51350454599 1091.5124099358602 80.063 2 0.01376752225258247 0.008035516093229745 0.9438714419765777 ['ENSG00000076067|ENST00000262031|RBMS2', 'ENST00000492283.1_1_2:161159304-161174707:-|nuORF', 'ENST00000552916.5_1_12:56956336-56975213:+|nuORF', 'ENST00000497205.1_1_3:29476395-29781369:+|nuORF', 'nc|ENSG00000144642|Q6XE24-3|RBMS3', 'nc|ENSG00000144642|Q6XE24-4|RBMS3', 'nc|ENSG00000144642|Q6XE24-5|RBMS3', 'nc|ENSG00000144642|Q6XE24-2|RBMS3', 'ENSG00000144642|ENST00000383767|RBMS3', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 33167 7114 GKSSVINTL True NCI_RA007_Epitope_Rep4 917.51819600361 917.51708993586 33.985 2 0.013737641074539135 0.008035516093229745 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2', 'ENST00000469191.1_1_1:38041920-38047841:-|nuORF'] 126044 12353 VPAPSPLSA True PC9_epitope_Rep4 837.45961849833 837.45852993586 55.323 2 0.013733621872031327 0.008035516093229745 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 70841 4523 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 22.509 2 0.013724027735737464 0.008035516093229745 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 130804 14211 VVEVGHFWGY True H1975_Epitope_Rep2 1191.5712942056298 1191.57018993586 59.813 2 0.013719890758910594 0.00805735594424221 0.9438714419765777 ['nc|ENSG00000156414|Q8NDG6-2|TDRD9', 'ENSG00000156414|ENST00000409874|TDRD9'] 76309 11274 NSDVVEQIY True H1975_Epitope_Rep3 1065.49785448185 1065.49727496793 48.47 1 0.013687292935789156 0.00805735594424221 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 25509 7573 FEQEMATAA True H1975_Epitope_Rep2 996.4222470134398 996.42114993586 34.081 2 0.013676928858301612 0.008076325715553584 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 136336 14367 YHAPDTALSTL True PC9_epitope_Rep4 1187.58225281215 1187.5811499358601 63.171 2 0.013675543890542988 0.008076325715553584 0.9438714419765777 ['ENST00000263056.5_1_10:30726187-30726295:+|nuORF'] 53848 6024 KYGPIRQI True PC9_epitope_Rep6 973.5709002828098 973.56980993586 31.515 2 0.0136716248154252 0.008076325715553584 0.9438714419765777 ['ENST00000478050.1_1_2:24296944-24299099:-|nuORF', 'ENSG00000115128|ENST00000233468|SF3B6'] 107255 7833 SYPRRFSTL True PC9_epitope_Rep6 1125.59309227937 1125.59143490379 39.525 3 0.013655184279494007 0.008076325715553584 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 108497 12615 TEFIHLISS True NCI_RA007_Epitope_Rep4 1045.54441075145 1045.5433099358602 55.55 2 0.013644873390087112 0.008076325715553584 0.9438714419765777 ['ENSG00000117505|ENST00000370272|DR1'] 30400 19491 GAFGFQLKEV True PC9_epitope_Rep2 1094.5760452328998 1094.57494993586 80.354 2 0.01363219191156958 0.008076325715553584 0.9438714419765777 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-3|BPNT1', 'nc|ENSG00000162813|O95861-4|BPNT1'] 107372 20631 SYSMIVNNL True PC9_epitope_Rep1 1039.50083168731 1039.50027496793 84.177 1 0.013624463555112194 0.008076325715553584 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 781 4606 AAYNRYFRK True NCI_RA007_Epitope_Rep4 1187.6199757335496 1187.6183249037902 24.13 3 0.013614573946429991 0.008076325715553584 0.9438714419765777 ['ENSG00000111341|ENST00000539261|MGP', 'nc|ENSG00000111341|P08493-2|MGP'] 58586 7418 LFERLTLKHD True NCI_RA007_Epitope_Rep3 1270.70337100434 1270.70173490379 36.304 3 0.013606875247925265 0.008076325715553584 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL'] 117994 9430 VASGSAVVL True H1975_Epitope_Rep2 801.45961849833 801.4590749679301 41.24 1 0.013602760174244428 0.008076325715553584 0.9438714419765777 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 35573 15688 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.51670993586 65.355 2 0.013602139934825513 0.008076325715553584 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 103416 18858 SQYGEIVNI True PC9_epitope_Rep4 1021.5080252427299 1021.5074749679301 80.623 1 0.013593329592249473 0.008076325715553584 0.9438714419765777 ['ENSG00000134597|ENST00000305536|RBMX2'] 40074 17443 HRAPVVAIAVL True PC9_epitope_Rep5 1144.7080624619598 1144.7069699358601 72.094 2 0.013591871368095015 0.008076325715553584 0.9438714419765777 ['ENSG00000131899|ENST00000316843|LLGL1'] 113142 14168 TQAPPNVVL True PC9_epitope_Rep6 937.5232813840499 937.52218993586 66.369 2 0.013561065401455293 0.008076325715553584 0.9438714419765777 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 59591 4554 LGSALRPSTSR True NCI_RA007_Epitope_Rep2 1143.6360197205101 1143.63492993586 22.342 2 0.013555023931659867 0.008076325715553584 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 23781 10472 EYKNTNEMF True PC9_epitope_Rep2 1174.49647458286 1174.49536993586 45.597 2 0.013540162925881399 0.008076325715553584 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 111525 21188 TLLRLLYEA True PC9_epitope_Rep5 1090.6386454894598 1090.63754993586 86.547 2 0.013531750949185949 0.008076325715553584 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 102665 10226 SQDNVIKVC True PC9_epitope_Rep1 1004.49608066004 1004.49498993586 44.215 2 0.013504070314979962 0.008076325715553584 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 39890 6283 HQISQQTQL True PC9_epitope_Rep1 1081.55162139021 1081.5505299358601 28.98 2 0.013448601751745238 0.008096178160282146 0.9438714419765777 ['RC3H1|p.P1010Tfs*14|1|0.12|ENSG00000135870|chr1:173943550-173943551|-/G|frameshift_variant', 'nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 96615 4082 SEMRAPPAA True H1975_Epitope_Rep2 928.4436511643598 928.44254993586 20.792 2 0.013443506131383677 0.008096178160282146 0.9438714419765777 ['nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000108312|ENST00000436088|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF', 'UBTF|p.K594Rfs*63|1|0.17|ENSG00000108312|chr17:44209476-44209476|T/-|frameshift_variant'] 89214 5428 REINITSA True NCI_RA007_Epitope_Rep3 902.48214484806 902.48104993586 28.363 2 0.013435110917790828 0.008096178160282146 0.9438714419765777 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 43205 5085 IGTVPVGR True H1975_Epitope_Rep3 797.47593726881 797.47484993586 24.675 2 0.013431148035250555 0.008096178160282146 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 25987 20998 FGYVDFESA True PC9_epitope_Rep3 1033.4392769765698 1033.43877496793 86.045 1 0.013421506873755103 0.008096178160282146 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 31028 15445 GAVHTVIFAG True PC9_epitope_Rep4 970.5236157372199 970.52250993586 67.342 2 0.013400506936857124 0.008096178160282146 0.9438714419765777 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 70836 4084 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 20.799 2 0.013392893930960464 0.008096178160282146 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 20590 19512 EQELIYFTF True NCI_RA007_Epitope_Rep3 1188.57029114612 1188.56918993586 85.131 2 0.013392646801423427 0.008096178160282146 0.9438714419765777 ['ENSG00000136237|ENST00000665637|RAPGEF5', 'nc|ENSG00000136237|Q92565|RAPGEF5'] 86238 15002 QPYMPTVSA True PC9_epitope_Rep4 992.4637179025999 992.46262993586 65.644 2 0.01332117182415147 0.008096178160282146 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 130548 20119 VTYGFPIML True H1975_Epitope_Rep2 1039.5412399473098 1039.5401499358602 83.376 2 0.0133169442181987 0.008096178160282146 0.9438714419765777 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF'] 69193 19253 LVMGDIPAA True PC9_epitope_Rep5 885.4629896266099 885.46188993586 79.098 2 0.013305616055097462 0.008096178160282146 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF', 'NASP|p.T209Dfs*3|1|0.09|ENSG00000132780|chr1:45607535-45607536|-/G|frameshift_variant', 'ENST00000529333.5_1_1:46049729-46070604:+|nuORF'] 136148 14443 YGGPVGAGI True PC9_epitope_Rep5 789.4021036222099 789.4015549679301 60.556 1 0.013303470601648394 0.008096178160282146 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7'] 94822 17851 RYLTVAAVF True PC9_epitope_Rep6 1038.5862159937797 1038.5851099358601 81.292 2 0.013286513289310575 0.008096178160282146 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 40695 8345 HTMEFALVK True NCI_RA007_Epitope_Rep5 1074.55320161334 1074.55210993586 38.772 2 0.013261507466372061 0.008114579638169564 0.9438714419765777 ['ENSG00000182636|ENST00000649030|NDN'] 83838 13103 QEFRFLPPP True NCI_RA007_Epitope_Rep4 1129.5920296502097 1129.59092993586 57.501 2 0.013237074487578902 0.008114579638169564 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 34619 19439 GQIEVVPEV True PC9_epitope_Rep1 968.5178616504398 968.51731496793 79.586 1 0.01322022176635441 0.008114579638169564 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 95073 18217 RYSNLILNLF True NCI_RA007_Epitope_Rep5 1251.69755734791 1251.69646993586 76.881 2 0.013218395918735217 0.008114579638169564 0.9438714419765777 ['ENSG00000078142|ENST00000262039|PIK3C3', 'ENST00000587328.2_1_18:39644671-39661098:+|nuORF'] 27111 19750 FLQEQLVEL True PC9_epitope_Rep6 1117.60192562757 1117.60082993586 88.628 2 0.013216994216706992 0.008114579638169564 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant'] 72013 13720 MQHENVIGL True PC9_epitope_Rep1 1039.51206507735 1039.5109699358602 57.623 2 0.013206222055206177 0.008114579638169564 0.9438714419765777 ['nc|ENSG00000156711|O15264-2|MAPK13', 'ENSG00000156711|ENST00000211287|MAPK13'] 105110 18344 STLPDVTEV True PC9_epitope_Rep3 959.48114178855 959.48004993586 75.771 2 0.013203798644817771 0.008114579638169564 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 111339 24079 TLIEDILGV True PC9_epitope_Rep5 971.5539128059899 971.5533649679301 97.603 1 0.013199172171831596 0.008114579638169564 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 8879 5187 AVFRGRMSMK True NCI_RA007_Epitope_Rep4 1181.6161533064098 1181.61451490379 26.482 3 0.013164035758362275 0.008114579638169564 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 63917 20407 LPWAPAGVAA True PC9_epitope_Rep5 951.5178020807898 951.5172549679301 83.534 1 0.013145342990474188 0.008114579638169564 0.9438714419765777 ['nc|ENSG00000166448|Q8N3G9-3|TMEM130', 'ENSG00000166448|ENST00000339375|TMEM130', 'nc|ENSG00000166448|Q8N3G9|TMEM130'] 119794 2844 VEVEGTVKA True H1975_Epitope_Rep1 930.5022115862998 930.50110993586 14.576 2 0.01314159333631594 0.008114579638169564 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 130719 12634 VVDLLAPYAK True NCI_RA007_Epitope_Rep2 1087.62774645259 1087.62664993586 53.756 2 0.013140545741013553 0.008114579638169564 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 13873 16276 DRDGGFVL True PC9_epitope_Rep5 877.4293809992099 877.42828993586 67.599 2 0.01312731823244168 0.008114579638169564 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 119489 4861 VEQIEAGTPGR True H1975_Epitope_Rep3 1155.5884008217497 1155.58730993586 23.823 2 0.013127272619527215 0.008114579638169564 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-7|TXNRD1', 'ENST00000529546.5_1_12:104682722-104742190:+|nuORF'] 13910 7607 DRDSGGPVL True PC9_epitope_Rep2 914.4457593393399 914.44466993586 34.633 2 0.013124761402855156 0.008114579638169564 0.9438714419765777 ['ENST00000471909.1_1_21:45217249-45223652:+|nuORF', 'ENST00000467112.5_1_21:45213150-45223652:+|nuORF', 'ENSG00000160214|ENST00000497547|RRP1'] 8233 15186 ATIIDILTK True NCI_RA007_Epitope_Rep2 986.60119735158 986.6006449679301 63.762 1 0.013122438013117925 0.008114579638169564 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 107232 10617 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59143490379 45.732 3 0.013106747425331291 0.008114579638169564 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 113723 9729 TRDETNYGIP True PC9_epitope_Rep6 1164.5411162761598 1164.54000993586 47.83 2 0.013103184109030082 0.008114579638169564 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 48372 8345 KEAIETIVA True H1975_Epitope_Rep3 972.5491617787198 972.54806993586 37.083 2 0.013099834059408223 0.008114579638169564 0.9438714419765777 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF', 'ENST00000494081.5_1_20:57478601-57480533:+|nuORF', 'ENST00000487981.5_1_20:57478601-57484479:+|nuORF', 'ENST00000476196.5_1_20:57478538-57485881:+|nuORF', 'ENST00000496934.5_1_20:57473969-57485881:+|nuORF', 'ENST00000313949.11_1_20:57415898-57485881:+|nuORF', 'ENST00000371075.7_3_20:57415898-57485881:+|nuORF', 'ENST00000480975.5_1_20:57464272-57485881:+|nuORF', 'nc|ENSG00000087460|P63092-3|GNAS', 'nc|ENSG00000087460|P63092-2|GNAS', 'ENSG00000087460|ENST00000371085|GNAS', 'nc|ENSG00000087460|P63092-4|GNAS', 'nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS'] 104176 4861 SSDANPVRY True H1975_Epitope_Rep2 1007.4672230599099 1007.46612993586 23.786 2 0.013092600448793523 0.008114579638169564 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant', 'MDN1|p.G347Sfs*36|2|0.35|ENSG00000112159|chr6:89790201-89790219|AGGAGGCTTTGTTCTACCT/-|frameshift_variant'] 1183 7633 AEDDLNTVA True H1975_Epitope_Rep3 946.42435518842 946.4238049679301 34.342 1 0.013089313276373051 0.008114579638169564 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 80637 18499 PLPPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 75.947 2 0.01307372843920623 0.008134586399503502 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 129151 18129 VTDDLVCLVY True H1975_Epitope_Rep2 1138.55801221026 1138.5569099358602 75.137 2 0.013058576390045377 0.008134586399503502 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 108901 10854 TESPCALVA True H1975_Epitope_Rep2 889.4215187374499 889.4209649679301 46.779 1 0.013033869268423155 0.008134586399503502 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1'] 25478 5240 FENVGSPKP True H1975_Epitope_Rep1 973.4868958753299 973.48578993586 25.219 2 0.013029214764066278 0.008134586399503502 0.9438714419765777 ['ENSG00000165895|ENST00000298815|ARHGAP42'] 41991 5850 IEDINDHTP True H1975_Epitope_Rep3 1052.4774533904401 1052.47634993586 27.515 2 0.01302570230913766 0.008134586399503502 0.9438714419765777 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB4|p.A557Gfs*30|1|0.19|ENSG00000253953|chr5:141389554-141389554|C/-|frameshift_variant', 'PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 135744 6049 YELGRPAA True NCI_RA007_Epitope_Rep5 875.4501164437899 875.44900993586 29.948 2 0.01302431018658451 0.008134586399503502 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8', 'ENST00000470475.1_1_1:45241268-45242451:+|nuORF'] 72574 15847 MVPEDVPRL True PC9_epitope_Rep2 1054.5481162329 1054.5470099358602 66.215 2 0.013014257014879696 0.008134586399503502 0.9438714419765777 ['ENSG00000272333|ENST00000420124|KMT2B'] 74584 10255 NLDPAVHEV True PC9_epitope_Rep1 992.49270953176 992.49160993586 44.329 2 0.013009045624450469 0.008134586399503502 0.9438714419765777 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'ENST00000503738.5_1_2:27851561-27855513:+|nuORF', 'ENST00000461249.1_1_2:27852141-27855513:+|nuORF', 'ENST00000478484.5_1_2:27851925-27854072:+|nuORF'] 129149 17998 VTDDLVCLVY True H1975_Epitope_Rep1 1138.55801221026 1138.55747496793 74.99 1 0.013000329110702633 0.008134586399503502 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 4951 22660 ALIDEQILCV True PC9_epitope_Rep5 1115.58964669171 1115.58854993586 92.163 2 0.012994907490984493 0.008134586399503502 0.9438714419765777 ['nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 61138 19205 LLDELPMIY True H1975_Epitope_Rep1 1105.57293399841 1105.57237496793 80.027 1 0.01298761178558187 0.008134586399503502 0.9438714419765777 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 101383 17800 SMTLAIHEI True PC9_epitope_Rep1 1013.52156713189 1013.52046993586 73.262 2 0.012978434586647483 0.008134586399503502 0.9438714419765777 ['ENSG00000143753|ENST00000323699|DEGS1'] 108247 9372 TEALHFVAA True H1975_Epitope_Rep3 957.4919812557698 957.49088993586 41.049 2 0.012925053956999225 0.008156570693973447 0.9438714419765777 ['ENSG00000125817|ENST00000379751|CENPB'] 73222 7374 NEGVATYAAA True H1975_Epitope_Rep2 965.4454249861698 965.44432993586 33.305 2 0.012916844859800273 0.008178372747622953 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 64192 19065 LQIDDNVTSAV True PC9_epitope_Rep3 1173.5877321154103 1173.5866299358602 78.557 2 0.012888743701285371 0.008178372747622953 0.9438714419765777 ['ENSG00000025772|ENST00000372813|TOMM34'] 33128 4620 GKPKITQSL True NCI_RA007_Epitope_Rep4 970.5811306133401 970.58002993586 24.186 2 0.012866166534686722 0.008191096057204843 0.9438714419765777 ['CD84|p.M142K|1|0.34|ENSG00000066294|chr1:160554110-160554110|A/T|missense_variant', 'nc|ENSG00000066294|Q9UIB8-7|CD84', 'nc|ENSG00000066294|Q9UIB8-6|CD84', 'ENST00000368047.3_1_1:160523601-160549236:-|nuORF', 'nc|ENSG00000066294|Q9UIB8-5|CD84', 'nc|ENSG00000066294|Q9UIB8-4|CD84', 'ENST00000360056.7_1_1:160523087-160549236:-|nuORF', 'ENSG00000066294|ENST00000368054|CD84', 'nc|ENSG00000066294|Q9UIB8-2|CD84', 'nc|ENSG00000066294|Q9UIB8|CD84'] 9961 5449 AYRQGHFTY True PC9_epitope_Rep6 1141.53049202281 1141.52884490379 28.882 3 0.012848086461351339 0.008191096057204843 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 87334 17326 QTAPEEAFIKL True PC9_epitope_Rep6 1245.6605031328497 1245.6594099358601 79.257 2 0.012835563448963213 0.008191096057204843 0.9438714419765777 ['TTC30B|p.A478Cfs*6|1|0.11|ENSG00000196659|chr2:177551332-177551333|-/A|frameshift_variant', 'TTC30A|p.A478Cfs*6|1|0.12|ENSG00000197557|chr2:177617270-177617271|-/A|frameshift_variant', 'ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 9659 16879 AYGNVFSAF True NCI_RA007_Epitope_Rep5 974.4497820906199 974.44868993586 71.681 2 0.012827552367777018 0.008191096057204843 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 21128 12140 ERDRAMLAL True PC9_epitope_Rep5 1073.56516327937 1073.56406993586 51.686 2 0.012799474620399369 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 113339 8571 TQKSLSLSLG True NCI_RA007_Epitope_Rep3 1032.5815245361598 1032.5804299358601 40.786 2 0.012793216659150017 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4'] 105041 5741 STIPPELVKQK True NCI_RA007_Epitope_Rep5 1238.72343774258 1238.7217949037902 28.77 3 0.012783944377278355 0.008191096057204843 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 14657 12710 DVNAAIATIK True PC9_epitope_Rep4 1014.57095985246 1014.56986993586 56.744 2 0.012781818808887242 0.008191096057204843 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 5041 14774 ALLGDLTKA True PC9_epitope_Rep4 900.52803241132 900.52692993586 64.76 2 0.01277151365568697 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000423641.1_1_10:86150999-86151317:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 31364 5435 GEAPPGTPP True H1975_Epitope_Rep3 821.39193286133 821.3913849679301 25.964 1 0.012749898747764221 0.008191096057204843 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 41310 12581 IAIDNLEKA True PC9_epitope_Rep2 985.54441075145 985.54330993586 53.699 2 0.01272745328757442 0.008191096057204843 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-1|BNIP1'] 17683 5090 EHSKPVVL True PC9_epitope_Rep3 907.5127167003499 907.51160993586 24.664 2 0.012725377381908569 0.008191096057204843 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000557024.1_1_14:64625447-64629048:+|nuORF'] 8750 13663 AVDTNGDII True PC9_epitope_Rep2 916.4501760134399 916.44906993586 57.846 2 0.012721956247491206 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000110171|O75382-4|TRIM3', 'nc|ENSG00000110171|O75382-3|TRIM3', 'nc|ENSG00000110171|O75382-2|TRIM3', 'ENSG00000110171|ENST00000345851|TRIM3'] 39065 5823 HKVPGDVSL True NCI_RA007_Epitope_Rep1 950.5185303567799 950.51742993586 26.705 2 0.012721277030505148 0.008191096057204843 0.9438714419765777 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4', 'nc|ENSG00000155659|Q9Y279-3|VSIG4'] 102148 8073 SPRNLAMEA True PC9_epitope_Rep1 987.4807649490699 987.47966993586 35.876 2 0.01270175765573696 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D'] 118092 9187 VATVSLPR True PC9_epitope_Rep2 841.5021520166499 841.50104993586 40.68 2 0.01269590904090533 0.008191096057204843 0.9438714419765777 ['CON__P00761'] 88955 7767 REDLSRLV True H1975_Epitope_Rep2 986.5508931142199 986.54978993586 34.823 2 0.012681568653589383 0.008191096057204843 0.9438714419765777 ['ENSG00000185043|ENST00000328649|CIB1', 'nc|ENSG00000185043|Q99828-2|CIB1'] 96911 6407 SETKIFTA True NCI_RA007_Epitope_Rep3 895.4650978015899 895.46400993586 32.207 2 0.01267854507032411 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L'] 106561 22053 SVWIGGSILA True PC9_epitope_Rep5 1001.5545815123298 1001.5540749679301 89.854 1 0.012677508897939485 0.008191096057204843 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000428275.1_1_X:53172047-53172134:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENSG00000181786|ENST00000324436|ACTL9'] 95630 13896 SAVGQFVSL True NCI_RA007_Epitope_Rep3 906.4810822188999 906.47998993586 61.979 2 0.012642059183976298 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1', 'nc|ENSG00000185024|Q92994-6|BRF1', 'nc|ENSG00000185024|Q92994-4|BRF1'] 41989 5745 IEDINDHTP True H1975_Epitope_Rep2 1052.4774533904401 1052.47634993586 27.095 2 0.012629310080303921 0.008191096057204843 0.9438714419765777 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4', 'PCDHGB4|p.A557Gfs*30|1|0.19|ENSG00000253953|chr5:141389554-141389554|C/-|frameshift_variant', 'PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 31868 6158 GEQEGAMVAA True NCI_RA007_Epitope_Rep3 961.4174959861698 961.41638993586 31.223 2 0.012612117927235557 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 54945 8152 LAHAAFSAA True PC9_epitope_Rep3 857.43955176009 857.43844993586 36.335 2 0.012603183945840365 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'MMGT1|p.E37Kfs*7|1|0.46|ENSG00000169446|chrX:135971082-135971082|T/-|frameshift_variant', 'ENSG00000169446|ENST00000305963|MMGT1'] 69911 12464 LYDIDVAK True PC9_epitope_Rep2 935.49639792987 935.49530993586 53.253 2 0.012601458278664558 0.008191096057204843 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000482216.1_1_5:120911545-120911773:-|nuORF', 'ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 2683 11613 AETAVSVIP True H1975_Epitope_Rep2 885.48074786573 885.4801949679301 49.736 1 0.012585124527426337 0.008191096057204843 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 4776 5187 ALEEVQEFHQ True H1975_Epitope_Rep3 1228.57241640444 1228.5713099358602 25.047 2 0.012581050440157324 0.008191096057204843 0.9438714419765777 ['ENSG00000164961|ENST00000318410|WASHC5', 'WASHC5|p.Y1056Tfs*28|1|0.3|ENSG00000164961|chr8:125037249-125037252|TGTA/-|frameshift_variant'] 126478 20103 VPMEIHFMEA True PC9_epitope_Rep1 1202.54640198074 1202.5453099358601 82.155 2 0.012580170890412964 0.008191096057204843 0.9438714419765777 ['ENST00000472678.1_1_2:61258678-61258789:+|nuORF'] 84152 8146 QERFTQDTQP True H1975_Epitope_Rep2 1248.5734790335998 1248.57184490379 36.283 3 0.012575184797851144 0.008191096057204843 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 63840 12016 LPTKDLLSA True PC9_epitope_Rep6 956.5542471591599 956.55314993586 57.507 2 0.012564428847929434 0.008191096057204843 0.9438714419765777 ['ENSG00000168014|ENST00000334126|C2CD3', 'nc|ENSG00000168014|Q4AC94-2|C2CD3', 'nc|ENSG00000168014|Q4AC94-4|C2CD3', 'nc|ENSG00000168014|Q4AC94-1|C2CD3', 'nc|ENSG00000168014|Q4AC94-3|C2CD3', 'C2CD3|p.I477*|1|0.37|ENSG00000168014|chr11:74118319-74118319|T/-|frameshift_variant', 'ENST00000415191.6_1_11:73824618-73881837:-|nuORF', 'C2CD3|p.V1068Sfs*6|1|0.26|ENSG00000168014|chr11:74093961-74093962|AG/-|frameshift_variant'] 20706 19541 EQISQFLQA True PC9_epitope_Rep4 1062.53457434374 1062.53346993586 83.287 2 0.012562334230643513 0.008191096057204843 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 40227 5977 HRGTGLVL True PC9_epitope_Rep6 851.49773534255 851.49662993586 31.306 2 0.012543219084924739 0.008191096057204843 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 32758 10543 GIAGSLKTV True PC9_epitope_Rep5 844.5018176634801 844.50072993586 45.543 2 0.012535886899930335 0.008191096057204843 0.9438714419765777 ['ENSG00000008083|ENST00000341776|JARID2'] 120856 13204 VGDPSVHLL True PC9_epitope_Rep6 935.5076313199099 935.50652993586 62.438 2 0.012517319694236535 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 30645 10129 GALETIWR True H1975_Epitope_Rep1 944.5079656730799 944.50686993586 43.897 2 0.01250830774329031 0.008191096057204843 0.9438714419765777 ['ENSG00000162461|ENST00000294454|SLC25A34'] 30 4739 AAAAPLGAR True PC9_epitope_Rep3 796.4555361774 796.45442993586 23.318 2 0.012503089300858852 0.008191096057204843 0.9438714419765777 ['ENST00000426838.8_1_18:42260239-42281192:+|nuORF'] 114752 11483 TSVPPGSAL True PC9_epitope_Rep5 827.4388830537499 827.43778993586 49.167 2 0.012497383145038671 0.008191096057204843 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'nc|ENSG00000181555|Q9BYW2-2|SETD2'] 23220 7786 EVQLVESGG True NCI_RA007_Epitope_Rep4 916.4501760134399 916.44962496793 36.631 1 0.012466466000139292 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000211964|P01763|IGHV3-48', 'ENSG00000259680|ENST00000569103|IGHV3OR16-17', 'nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21', 'nc|ENSG00000211965|A0A0A0MS15|IGHV3-49', 'nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72', 'nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43', 'nc|ENSG00000211949|P01764|IGHV3-23', 'nc|ENSG00000211943|A0A0B4J1V0|IGHV3-15', 'nc|ENSG00000211946|A0A0C4DH32|IGHV3-20', 'nc|ENSG00000211972|A0A0C4DH42|IGHV3-66', 'nc|ENSG00000282639|A0A0J9YX35|IGHV3-64D', 'nc|ENSG00000211958|A0A0C4DH36|IGHV3-38', 'nc|ENSG00000211944|A0A0C4DH30|IGHV3-16', 'nc|ENSG00000224650|A0A0B4J1X5|IGHV3-74', 'nc|ENSG00000211942|P01766|IGHV3-13', 'nc|ENSG00000211976|A0A0B4J1V6|IGHV3-73', 'nc|ENSG00000211957|A0A0C4DH35|IGHV3-35', 'nc|ENSG00000211938|P01780|IGHV3-7'] 6830 17479 AQIDGTLSTI True PC9_epitope_Rep4 1017.5342399905701 1017.5336749679301 75.233 1 0.012461352646611261 0.008191096057204843 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 98963 11022 SKFPTQISL True NCI_RA007_Epitope_Rep3 1019.5651461960299 1019.56404993586 50.448 2 0.012456981385167397 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000122779|O15164-2|TRIM24', 'ENSG00000122779|ENST00000343526|TRIM24'] 108995 8852 TEVLKTHGLLV True NCI_RA007_Epitope_Rep3 1208.71287305888 1208.71123490379 41.911 3 0.01245155268281116 0.008191096057204843 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A'] 137492 21096 YLPPGFLSA True PC9_epitope_Rep2 963.50656869075 963.50546993586 86.605 2 0.01244663266283758 0.008191096057204843 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 41136 20219 HYPPVQVLF True PC9_epitope_Rep3 1098.58621599378 1098.5851099358601 83.032 2 0.012426282838621563 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 139737 19653 YTYEFDFSKV True PC9_epitope_Rep4 1297.5866694862498 1297.5855699358601 83.714 2 0.01241664773841927 0.008191096057204843 0.9438714419765777 ['ENSG00000126814|ENST00000261249|TRMT5'] 38803 6596 HHYSGNNIEL True PC9_epitope_Rep6 1182.5417849825 1182.54013490379 34.078 3 0.012408079637759407 0.008191096057204843 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 99141 23151 SLALISIEL True PC9_epitope_Rep3 957.57464825057 957.57354993586 94.32 2 0.012387414168330163 0.008191096057204843 0.9438714419765777 ['EFR3A|p.T559S|1|0.41|ENSG00000132294|chr8:131984239-131984239|C/G|missense_variant'] 108602 8754 TEILKSVVA True H1975_Epitope_Rep1 958.5698972232999 958.56880993586 38.602 2 0.012380640731540861 0.008191096057204843 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 24572 21496 FALPYVIVL True H1975_Epitope_Rep3 1033.6212045201698 1033.62010993586 89.834 2 0.012363312889624674 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000163607|Q8N3Z3-2|GTPBP8', 'ENSG00000163607|ENST00000383678|GTPBP8'] 8703 10261 AVDGNTVEL True NCI_RA007_Epitope_Rep1 916.45017601344 916.44962496793 43.923 1 0.012340814395282597 0.008191096057204843 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 107007 10799 SYLKQLPHF True NCI_RA007_Epitope_Rep4 1131.6076797143498 1131.60604490379 48.385 3 0.01233842127705536 0.008191096057204843 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 27582 13122 FPRPVTVEP True PC9_epitope_Rep2 1040.5654805492 1040.5643899358602 55.748 2 0.012330341726936212 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 41131 20173 HYPPVQVLF True PC9_epitope_Rep1 1098.58621599378 1098.5851099358601 82.424 2 0.012323871614048668 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 131939 12946 VYFPDQHINF True NCI_RA007_Epitope_Rep3 1278.6033226099 1278.6022299358601 58.198 2 0.012319949056560971 0.008191096057204843 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B', 'nc|ENSG00000116117|Q8TEW8-5|PARD3B'] 124831 10479 VLLLGKLNSE True H1975_Epitope_Rep1 1084.64921017316 1084.64810993586 45.263 2 0.01230342604040548 0.008211416303313339 0.9438714419765777 ['ENST00000602540.5_1_12:76422676-76422754:-|nuORF'] 70417 6966 LYQRAFQHL True NCI_RA007_Epitope_Rep3 1174.6247267608198 1174.62307490379 34.507 3 0.012264310521288152 0.008211416303313339 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 26470 18849 FIPPDGNFRL True PC9_epitope_Rep4 1174.61349337078 1174.6123899358602 80.59 2 0.012259355994856877 0.008211416303313339 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 100495 12929 SLPKKLALL True PC9_epitope_Rep4 981.6586526580498 981.65754993586 57.616 2 0.01224646776640881 0.008211416303313339 0.9438714419765777 ['ENST00000588858.5_1_19:13886394-13889009:+|nuORF', 'ENSG00000104979|ENST00000588234|C19orf53'] 113122 12299 TQAPGNPVL True PC9_epitope_Rep3 895.4763311916299 895.4752299358599 52.334 2 0.012244925976577859 0.008211416303313339 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 75703 14489 NQVEALNNL True PC9_epitope_Rep6 1013.5141732523299 1013.51306993586 67.616 2 0.012212486244206506 0.008211416303313339 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'BIRC6|p.C777*|1|0.3|ENSG00000115760|chr2:32415620-32415621|TG/-|frameshift_variant'] 31425 7492 GEDLNKWQA True H1975_Epitope_Rep2 1059.4985231881901 1059.49742993586 33.768 2 0.012205293178339651 0.008211416303313339 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 95696 20200 SAYEFVTWL True H1975_Epitope_Rep2 1114.5335117145798 1114.5324099358602 83.702 2 0.012203097902724237 0.008211416303313339 0.9438714419765777 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25', 'ENST00000593636.1_1_19:50321571-50322554:+|nuORF'] 77620 11375 NYVEVTRKW True PC9_epitope_Rep5 1193.61930702721 1193.61766490379 48.75 3 0.012195504420228239 0.008211416303313339 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1'] 26759 9558 FLDHKTLYY True H1975_Epitope_Rep2 1198.60225998074 1198.60116993586 41.739 2 0.012190042185637424 0.008211416303313339 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'ENST00000444292.2_1_X:95228575-95229244:-|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5', 'nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7'] 24304 15941 FADDMYSLY True H1975_Epitope_Rep3 1123.45321278855 1123.45210993586 66.77 2 0.01216406996681392 0.008226448474126492 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 102679 2553 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44521496793 14.731 1 0.01215627701820673 0.008226448474126492 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 83183 15434 PYVDNSYKW True PC9_epitope_Rep5 1170.53457434374 1170.53346993586 64.377 2 0.012151217878540559 0.008226448474126492 0.9438714419765777 ['ENSG00000103642|ENST00000261893|LACTB'] 37766 4299 HAVQHPVL True NCI_RA007_Epitope_Rep4 899.49773534255 899.49662993586 22.877 2 0.012111484829817974 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1'] 17382 11371 EHFDASHVAL True PC9_epitope_Rep2 1124.5250722892 1124.52343490379 49.06 3 0.012110328054356828 0.008226448474126492 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH'] 106473 9224 SVVGPVKGV True PC9_epitope_Rep3 840.5069030439199 840.50580993586 40.419 2 0.012089092091954023 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 110393 15184 TILRSYEERLR True PC9_epitope_Rep1 1434.7943112670598 1434.79267490379 63.227 3 0.012055406035670554 0.008226448474126492 0.9438714419765777 ['ENSG00000103269|ENST00000352681|RHBDL1', 'nc|ENSG00000103269|O75783|RHBDL1', 'ENST00000450775.2_1_16:727761-728049:+|nuORF'] 108965 7618 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 34.255 2 0.012055029289883914 0.008226448474126492 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 115576 6540 TVIAKVNNV True PC9_epitope_Rep6 956.5654805492 956.56438993586 33.831 2 0.012050657535291453 0.008226448474126492 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 88342 16616 QYLRVETQF True PC9_epitope_Rep1 1182.6033226099 1182.6022299358601 68.74 2 0.012035833851775216 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 119372 7575 VENPGGYVA True H1975_Epitope_Rep2 904.42904664604 904.4279499358599 34.089 2 0.011992748627128708 0.008226448474126492 0.9438714419765777 ['TFRC-TCTEX1D2|1|fusion', 'ENSG00000072274|ENST00000360110|TFRC'] 71999 23020 MQDPMEIFV True PC9_epitope_Rep1 1108.49330377872 1108.49220993586 93.343 2 0.011966296557711207 0.008226448474126492 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF'] 138172 14977 YQNQGIYQV True PC9_epitope_Rep3 1111.52982331647 1111.5287299358602 62.739 2 0.01196486851315895 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 113112 11991 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.4752299358599 50.986 2 0.011964150579235132 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 95003 15236 RYQDIIHSI True PC9_epitope_Rep5 1143.6036569630699 1143.60254993586 63.614 2 0.0119012466901048 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'ENST00000466844.1_1_7:72877242-72880699:-|nuORF'] 120444 9871 VFTSRSAAF True PC9_epitope_Rep4 984.5028802926398 984.50178993586 45.619 2 0.011891838476886487 0.008226448474126492 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 1286 7424 AEDSPAIGP True H1975_Epitope_Rep2 855.3974121645899 855.39686496793 33.501 1 0.011891617507492269 0.008226448474126492 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 46856 22871 IVGDFGIVVV True PC9_epitope_Rep1 1016.5906326678798 1016.58952993586 92.766 2 0.011882962634877153 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000157064|Q9BZQ4-2|NMNAT2', 'ENSG00000157064|ENST00000287713|NMNAT2'] 1088 5056 AEAPASPAP True H1975_Epitope_Rep3 809.3919328613299 809.3913849679301 24.57 1 0.011849146357110506 0.008226448474126492 0.9438714419765777 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B'] 48009 12025 KAINVFVSA True PC9_epitope_Rep6 947.54401682863 947.54290993586 57.547 2 0.011842768778687781 0.008226448474126492 0.9438714419765777 ['ENSG00000114209|ENST00000392750|PDCD10'] 308 17207 AAIAVLEEL True NCI_RA007_Epitope_Rep5 927.5276980581499 927.52660993586 72.96 2 0.011825846256951211 0.008226448474126492 0.9438714419765777 ['ENSG00000124214|ENST00000371856|STAU1', 'nc|ENSG00000124214|O95793-2|STAU1', 'nc|ENSG00000124214|O95793-3|STAU1'] 87925 16220 QVPEEQVLNAA True PC9_epitope_Rep5 1196.60371653272 1196.60260993586 67.382 2 0.011817602843445279 0.008226448474126492 0.9438714419765777 ['ENSG00000160813|ENST00000292330|PPP1R35'] 106986 16691 SYLERHGLINF True PC9_epitope_Rep4 1347.6935345966297 1347.69187490379 72.176 3 0.01180842004311317 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 119650 8071 VESGVPQPP True H1975_Epitope_Rep3 908.4603467743198 908.45924993586 36.02 2 0.011797078824743243 0.008226448474126492 0.9438714419765777 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 105495 13581 SVDDGITLY True H1975_Epitope_Rep2 981.46549172441 981.46494496793 57.375 1 0.011792423639657887 0.008226448474126492 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 65248 14375 LSEFQLEGY True H1975_Epitope_Rep2 1084.5076908895599 1084.5065899358601 60.443 2 0.01175270797635031 0.008226448474126492 0.9438714419765777 ['ENSG00000177303|ENST00000321617|CASKIN2', 'GRB2-CASKIN2|1|fusion', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2'] 5622 6512 APAEEPAAAAA True PC9_epitope_Rep3 967.4610750503098 967.45996993586 30.076 2 0.011736666848083319 0.008226448474126492 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 114974 5831 TTISKVSQV True PC9_epitope_Rep2 961.5444107514498 961.54330993586 27.823 2 0.011735252966600312 0.008226448474126492 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 26473 19851 FIPPDGNFRL True PC9_epitope_Rep5 1174.61349337078 1174.6123899358602 81.406 2 0.011728864387081525 0.008226448474126492 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 34862 7740 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42828993586 39.131 2 0.011719114803124129 0.008226448474126492 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 41140 20188 HYPPVQVLF True PC9_epitope_Rep5 1098.58621599378 1098.5851099358601 82.701 2 0.011716315238019625 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 1275 4796 AEDREQLVA True H1975_Epitope_Rep2 1029.50908787189 1029.50798993586 23.537 2 0.011713365254873083 0.008226448474126492 0.9438714419765777 ['ENSG00000100867|ENST00000250383|DHRS2', 'ENST00000556729.1_1_14:24108037-24109131:+|nuORF', 'ENST00000553896.5_1_14:24099332-24110898:+|nuORF', 'nc|ENSG00000100867|Q13268-2|DHRS2'] 100561 12811 SLPYQVSL True H1975_Epitope_Rep3 905.4858332461699 905.48528496793 54.496 1 0.011708176333282567 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000010438|P35030-5|PRSS3', 'ENSG00000010438|ENST00000379405|PRSS3', 'nc|ENSG00000010438|P35030-2|PRSS3', 'nc|ENSG00000010438|P35030-4|PRSS3', 'nc|ENSG00000010438|P35030|PRSS3'] 101633 15706 SPFGTITSA True PC9_epitope_Rep4 879.43379767331 879.43324496793 68.34 1 0.011704908659429563 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 1730 10674 AEGRIIWPA True H1975_Epitope_Rep2 1011.5501648382299 1011.54906993586 46.081 2 0.011703140014259672 0.008226448474126492 0.9438714419765777 ['ENST00000457895.6_2_19:19516611-19516803:+|nuORF'] 105842 17620 SVISVVSYL True H1975_Epitope_Rep3 965.5433481222899 965.54279496793 73.615 1 0.011663226840755252 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3', 'ENST00000543123.1_1_11:63449027-63517671:+|nuORF', 'nc|ENSG00000133318|O95197-6|RTN3', 'nc|ENSG00000133318|O95197-5|RTN3'] 102482 8297 SPYIPPHAA True PC9_epitope_Rep3 951.48141657207 951.48030993586 36.887 2 0.01162743835234807 0.008226448474126492 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 31999 13160 GETIFVTAP True NCI_RA007_Epitope_Rep4 933.48074786573 933.47964993586 57.719 2 0.011613335911329499 0.008226448474126492 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 76825 24299 NVFFGSIWL True PC9_epitope_Rep5 1081.5596668927699 1081.55907496793 98.488 1 0.01160895666393324 0.008226448474126492 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 95284 21817 SADTTILFV True PC9_epitope_Rep5 965.50696261357 965.50586993586 88.951 2 0.011586804772603975 0.008246556565187593 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 34550 6057 GQFDHGSGSL True NCI_RA007_Epitope_Rep5 1003.4359229316299 1003.43482993586 29.98 2 0.011584016577055085 0.008246556565187593 0.9438714419765777 ['THRAP3|p.T757Nfs*6|1|0.26|ENSG00000054118|chr1:36296730-36296731|-/A|frameshift_variant', 'ENSG00000054118|ENST00000354618|THRAP3'] 107550 12773 TADSGYYVL True NCI_RA007_Epitope_Rep4 987.45492704071 987.4543749679301 56.192 1 0.011582722335068461 0.008246556565187593 0.9438714419765777 ['nc|ENSG00000179403|Q6PCB0-2|VWA1', 'ENSG00000179403|ENST00000476993|VWA1'] 106006 21827 SVLLLNPAL True PC9_epitope_Rep2 938.58006798418 938.57896993586 89.432 2 0.011567010890947685 0.008246556565187593 0.9438714419765777 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 2674 11324 AETAVSVIP True H1975_Epitope_Rep1 885.48074786573 885.4801949679301 48.536 1 0.011562476641101571 0.008246556565187593 0.9438714419765777 ['DLGAP5|p.E603D|1|0.21|ENSG00000126787|chr14:55158586-55158586|T/G|missense_variant', 'nc|ENSG00000126787|Q15398-1|DLGAP5', 'nc|ENSG00000126787|Q15398-3|DLGAP5', 'chr14:55148684-55150799|497|14.5|0.53|4.76|-|ENST00000395425|DLGAP5,DLGAP5', 'chr14:55148473-55148594|498|12.04|0.62|4.29|-|ENST00000395425|DLGAP5,DLGAP5', 'ENSG00000126787|ENST00000247191|DLGAP5'] 69653 11075 LVVSTQTALA True NCI_RA007_Epitope_Rep1 1001.5757108797299 1001.5746099358599 47.076 2 0.011557522436190853 0.008246556565187593 0.9438714419765777 ['CON__P02769'] 111053 5046 TLDRQLNHY True H1975_Epitope_Rep3 1158.57817049122 1158.57652490379 24.531 3 0.011534617433784904 0.008246556565187593 0.9438714419765777 ['ENST00000523824.5_1_8:126104167-126163564:+|nuORF', 'ENSG00000156831|ENST00000287437|NSMCE2'] 25257 8295 FEDESPPAP True H1975_Epitope_Rep2 987.4185415319898 987.4179949679301 36.858 1 0.01151867591303798 0.008246556565187593 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D'] 77451 11322 NYNNQSSNFGP True PC9_epitope_Rep3 1240.51087877704 1240.50978993586 48.556 2 0.011506321336421026 0.008246556565187593 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF'] 87178 19811 QSLEYLEQV True PC9_epitope_Rep2 1107.54480467427 1107.54427496793 81.592 1 0.011492604629091614 0.008246556565187593 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 55467 15525 LAVDAVIAELK True NCI_RA007_Epitope_Rep1 1140.675424921 1140.6743299358602 64.473 2 0.011487225897241386 0.008246556565187593 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000447985.1_1_21:30260983-30261475:-|nuORF'] 58267 6524 LETAVGAA True H1975_Epitope_Rep2 730.3861192049 730.3855749679301 30.008 1 0.011449221332374094 0.00826354979120175 0.9438714419765777 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 37048 17966 GVSDVDYSL True PC9_epitope_Rep5 953.43419159613 953.43364496793 74.123 1 0.011441650545909692 0.00826354979120175 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 104233 11466 SSDNIMVQY True H1975_Epitope_Rep2 1055.45936079815 1055.45877496793 49.159 1 0.01140721523327625 0.00826354979120175 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1', 'ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 32014 6079 GETVPAPSA True H1975_Epitope_Rep2 827.40249754503 827.40140993586 28.36 2 0.011404231682937778 0.00826354979120175 0.9438714419765777 ['nc|ENSG00000154813|Q96FX2-2|DPH3', 'ENST00000462982.1_1_3:16302273-16305894:-|nuORF', 'ENSG00000154813|ENST00000488423|DPH3'] 113130 12213 TQAPGNPVL True PC9_epitope_Rep5 895.4763311916299 895.4752299358599 51.964 2 0.011399249398039078 0.00826354979120175 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 87860 21573 QVLEDFPTI True PC9_epitope_Rep2 1060.54407639828 1060.5429699358601 88.452 2 0.01139698593180756 0.00826354979120175 0.9438714419765777 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-4|FDFT1'] 17323 15701 EHDPQYAVIL True PC9_epitope_Rep6 1183.5873381925899 1183.58624993586 72.607 2 0.011391012063737342 0.00826354979120175 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 60962 17715 LLAESVTEV True PC9_epitope_Rep2 959.5175272972699 959.51642993586 73.422 2 0.011389282182164154 0.00826354979120175 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 139530 20179 YTLDGGDIINA True PC9_epitope_Rep5 1150.5506183307 1150.55007496793 82.666 1 0.011374487343238452 0.00826354979120175 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 118648 9296 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48472993586 40.715 2 0.011349187560037043 0.00826354979120175 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 53080 15416 KSDPFLVFY True H1975_Epitope_Rep1 1114.5698972233 1114.5688099358601 64.567 2 0.011304135763942402 0.00826354979120175 0.9438714419765777 ['ENSG00000124772|ENST00000244751|CPNE5', 'ENST00000551855.1_1_12:39120300-39161507:-|nuORF', 'ENSG00000139117|ENST00000331366|CPNE8', 'ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000144550|Q8IYJ1-2|CPNE9'] 47979 4336 KAFSDHSSL True NCI_RA007_Epitope_Rep4 990.4770594676199 990.47596993586 23.022 2 0.011284606995438968 0.00826354979120175 0.9438714419765777 ['ENST00000590152.1_1_19:9267931-9272106:+|nuORF', 'nc|ENSG00000130803|Q96PQ6-2|ZNF317', 'ENSG00000130803|ENST00000247956|ZNF317', 'nc|ENSG00000130803|Q96PQ6-3|ZNF317', 'nc|ENSG00000130803|Q96PQ6-4|ZNF317', 'ENST00000591278.5_1_19:9268612-9272106:+|nuORF'] 24308 6971 FADENNEKL True PC9_epitope_Rep4 1078.49310345458 1078.49200993586 34.054 2 0.011283374252487197 0.00826354979120175 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 5226 18075 ALQEKLWNV True PC9_epitope_Rep5 1099.60259433391 1099.6014899358602 74.54 2 0.011279143408583535 0.00826354979120175 0.9438714419765777 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF'] 105384 14506 SVAAQLTGV True PC9_epitope_Rep4 844.4654321547599 844.4648849679301 63.712 1 0.01127672421067658 0.00826354979120175 0.9438714419765777 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 40813 14076 HVIGSLAEI True PC9_epitope_Rep6 937.5232813840499 937.52218993586 66.015 2 0.011260361795738803 0.00826354979120175 0.9438714419765777 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant', 'nc|ENSG00000133704|O15397-2|IPO8'] 14823 17055 DYDSVFHHL True PC9_epitope_Rep3 1131.4985231881901 1131.49687490379 70.755 3 0.011260311372352777 0.00826354979120175 0.9438714419765777 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 31798 12094 GEMEPPALP True H1975_Epitope_Rep1 939.4371688015898 939.43661496793 51.533 1 0.011258069718418952 0.00826354979120175 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 8820 14539 AVFPSIVG True H1975_Epitope_Rep2 788.4432401582 788.44269496793 61.081 1 0.011243990535907944 0.00826354979120175 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 5742 6295 APDEKYVAA True PC9_epitope_Rep5 962.4709114580199 962.46980993586 29.189 2 0.011230207297845152 0.00826354979120175 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 31522 4394 GEFEKKYVA True NCI_RA007_Epitope_Rep3 1069.5444107514497 1069.5433099358602 24.058 2 0.0112159936984165 0.00826354979120175 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 70213 23619 LYLPSFFTY True PC9_epitope_Rep2 1149.57464825057 1149.5740749679298 96.32 1 0.011211940185418738 0.00826354979120175 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 24290 20057 FAAPLILL True H1975_Epitope_Rep3 856.54222592348 856.54167496793 83.941 1 0.011211065065350674 0.00826354979120175 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 96975 8922 SEVGKLLSA True H1975_Epitope_Rep2 902.50729696674 902.50618993586 39.28 2 0.011194702724011817 0.00826354979120175 0.9438714419765777 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF'] 123315 10727 VHSTNVLL True PC9_epitope_Rep3 881.49706663621 881.49596993586 46.216 2 0.011188610619513739 0.00826354979120175 0.9438714419765777 ['BACH1|p.I569Sfs*11|1|0.53|ENSG00000156273|chr21:29329623-29329624|TT/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 44805 4242 IPVEQKEGA True PC9_epitope_Rep3 969.5131106231698 969.51200993586 21.431 2 0.011167984650960248 0.00826354979120175 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 25199 8602 FEADPPGQVA True H1975_Epitope_Rep1 1029.47672511445 1029.47562993586 38.016 2 0.011164029690180637 0.00826354979120175 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 26278 18464 FIDDANYSV True PC9_epitope_Rep3 1042.4607406971402 1042.4596499358602 76.228 2 0.011158276925198355 0.00826354979120175 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 126707 14199 VPRPPSLLA True PC9_epitope_Rep2 948.5756513100799 948.57454993586 59.883 2 0.01114308290751652 0.008285095665237947 0.9438714419765777 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A', 'ENST00000494435.5_1_21:47924311-47965916:+|nuORF'] 44208 6000 ILSGVVTK True H1975_Epitope_Rep3 815.51165407119 815.51054993586 28.092 2 0.011078167943943893 0.008285095665237947 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 31442 9273 GEDPTSVAIA True H1975_Epitope_Rep3 958.46074069714 958.4601949679301 40.663 1 0.01106624819233809 0.008285095665237947 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 9833 17110 AYLKGTVLF True PC9_epitope_Rep6 1010.5800679841799 1010.57896993586 78.39 2 0.011034392169630616 0.008304803975704031 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 6740 16618 AQDPTAFSV True PC9_epitope_Rep1 934.4396113297399 934.43850993586 68.747 2 0.011028820292538835 0.008304803975704031 0.9438714419765777 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 34477 20127 GQDGLYIGV True PC9_epitope_Rep5 920.4603467743199 920.45924993586 82.466 2 0.011015555415496647 0.008304803975704031 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 70808 10988 MEENFAVEA True H1975_Epitope_Rep1 1038.4328116971399 1038.43170993586 47.23 2 0.011002475413539612 0.008304803975704031 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 109742 9627 THGPPVQL True PC9_epitope_Rep5 847.45520182423 847.45410993586 41.995 2 0.010970048802801575 0.008304803975704031 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 111056 16754 TLDSITLMY True H1975_Epitope_Rep2 1055.52089842555 1055.5198099358602 69.682 2 0.010954109260193157 0.008304803975704031 0.9438714419765777 ['ENSG00000104643|ENST00000221086|MTMR9', 'ENST00000528389.1_1_8:11152715-11157663:+|nuORF', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 46814 11272 IVDSATALY True H1975_Epitope_Rep2 951.49131254943 951.4907649679301 48.403 1 0.010947568438421557 0.008304803975704031 0.9438714419765777 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51', 'nc|ENSG00000051180|Q06609-3|RAD51'] 13893 6065 DRDPASGTAL True PC9_epitope_Rep6 1001.47778774361 1001.47668993586 31.705 2 0.010920091483640358 0.008304803975704031 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 116808 14704 TYLSIIHSL True NCI_RA007_Epitope_Rep4 1045.58079626017 1045.5796899358602 63.979 2 0.010914092574323641 0.008304803975704031 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 101634 15713 SPFGTITSA True PC9_epitope_Rep4 879.43379767331 879.43270993586 68.366 2 0.010891933311614838 0.008304803975704031 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 23914 14992 EYNKSWQTF True PC9_epitope_Rep1 1201.5403880001697 1201.53928993586 62.486 2 0.01089193000738718 0.008304803975704031 0.9438714419765777 ['ENSG00000198440|ENST00000333201|ZNF583'] 34889 7206 GQVPPGESV True PC9_epitope_Rep4 868.42904664604 868.4279499358599 35.022 2 0.0108827303474132 0.008304803975704031 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 137848 8484 YPIEHGIITN True NCI_RA007_Epitope_Rep2 1155.5924235730297 1155.5913299358601 37.644 2 0.010882488488494331 0.008304803975704031 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 6416 13252 APSGNFVAC True PC9_epitope_Rep1 864.37998827864 864.37888993586 55.84 2 0.010836822609288584 0.008324500971559795 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 81255 12314 PPPLPPPPP True PC9_epitope_Rep3 907.51673945163 907.51564993586 52.389 2 0.010806525334137654 0.008324500971559795 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000135723|ENST00000258201|FHOD1', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000122574|ENST00000242140|WIPF3', 'ENSG00000090470|ENST00000204549|PDCD7'] 6507 8058 APTPSTAAV True PC9_epitope_Rep5 813.4232329896099 813.42212993586 35.933 2 0.010768746243267863 0.008324500971559795 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 47495 23038 IYLDGIITI True PC9_epitope_Rep2 1019.59029831471 1019.58920993586 94.108 2 0.010743172568404815 0.008324500971559795 0.9438714419765777 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000172785|Q9BRT8-3|ZNG1A', 'ENST00000431099.3_1_9:160122-173274:-|nuORF', 'ENST00000495302.5_1_9:151417-166034:-|nuORF', 'ENST00000377445.5_9:69238165-69262487:-|nuORF', 'ENST00000492566.1_1_2:114195517-114220159:+|nuORF', 'ENST00000495626.2_9:69245151-69262487:-|nuORF', 'ENST00000476973.2_9:69243634-69261296:-|nuORF', 'ENST00000461037.2_9:69234942-69249581:-|nuORF', 'nc|ENSG00000215126|Q5RIA9-3|ZNG1E'] 134408 11535 WTDGSTLQY True H1975_Epitope_Rep2 1069.47163973401 1069.47107496793 49.429 1 0.010735620431064389 0.008324500971559795 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 42963 6878 IGAEVYHNLK True PC9_epitope_Rep4 1142.60840799034 1142.6067749037902 33.676 3 0.010728522178563805 0.008324500971559795 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 726 15983 AAVPGKTFVNI True PC9_epitope_Rep1 1115.63389446219 1115.63278993586 66.288 2 0.01070618242985725 0.008324500971559795 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 98757 19926 SISDVIAQV True PC9_epitope_Rep4 930.5022115863 930.50110993586 84.779 2 0.010701831991165988 0.008324500971559795 0.9438714419765777 ['ENSG00000154122|ENST00000284268|ANKH'] 25072 6408 FDENGQEIK True NCI_RA007_Epitope_Rep1 1078.4931034545798 1078.49200993586 28.95 2 0.010700333131463227 0.008324500971559795 0.9438714419765777 ['ENST00000437348.5_1_11:31115730-31149186:-|nuORF', 'DCDC1|p.I1627Kfs*18|1|0.15|ENSG00000170959|chr11:30894261-30894261|A/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.M1392*|1|0.16|ENSG00000170959|chr11:30905096-30905096|C/-|frameshift_variant', 'ENST00000342355.8_1_11:30965860-31263019:-|nuORF'] 47321 19588 IYGLLKNPF True PC9_epitope_Rep4 1063.60661708519 1063.6055299358602 83.467 2 0.010700168837599356 0.008324500971559795 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1', 'ENST00000463270.1_1_10:27418274-27425210:-|nuORF'] 47997 15794 KAIGAVPLI True PC9_epitope_Rep4 880.57458868092 880.57348993586 68.677 2 0.010698663894164084 0.008324500971559795 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD', 'ENST00000497544.2_2_11:1775127-1776230:-|nuORF'] 131949 11742 VYFSKSEQL True PC9_epitope_Rep2 1099.5549754351498 1099.5538699358601 50.499 2 0.010684497098881723 0.008324500971559795 0.9438714419765777 ['ENSG00000142627|ENST00000358432|EPHA2'] 138068 5340 YQDTHPERL True PC9_epitope_Rep5 1157.5465360097699 1157.54542993586 25.553 2 0.010672539441352777 0.008324500971559795 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 74016 8613 NHSADFETV True PC9_epitope_Rep1 1018.43558857846 1018.43448993586 37.966 2 0.010648908033296293 0.00834400247229703 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 105904 23539 SVLDGLLYV True PC9_epitope_Rep5 977.54334812229 977.54224993586 95.527 2 0.010630889623463534 0.00834400247229703 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 17590 16573 EHLQVITTL True PC9_epitope_Rep2 1052.5866099166 1052.58607496793 68.986 1 0.010607844677764735 0.00834400247229703 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 47601 14231 IYNQVKQII True PC9_epitope_Rep2 1117.64954452633 1117.64844993586 60.006 2 0.010607140103321084 0.00834400247229703 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 24259 18841 FAADIISVL True H1975_Epitope_Rep2 947.53278343859 947.53168993586 78.229 2 0.010599547897408544 0.00834400247229703 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 102812 14903 SQFPGAITL True NCI_RA007_Epitope_Rep4 932.4967322830399 932.49562993586 64.787 2 0.010591379947943598 0.00834400247229703 0.9438714419765777 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF', 'nc|ENSG00000262664|Q8WZ82|OVCA2', 'ENST00000571710.5_1_17:1945525-1946395:+|nuORF'] 115276 13353 TVDNARIVL True PC9_epitope_Rep3 999.5712942056299 999.57018993586 56.397 2 0.010589997062871063 0.00834400247229703 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 38874 17342 HIIENIVAV True PC9_epitope_Rep2 1006.58113061334 1006.58057496793 71.959 1 0.010545485257076808 0.00834400247229703 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 63649 7603 LPNNVKTAV True PC9_epitope_Rep5 954.5498304850599 954.54872993586 34.194 2 0.010543381058714791 0.00834400247229703 0.9438714419765777 ['ENSG00000261456|ENST00000568584|TUBB8'] 78207 7489 PAPPPPPPP True PC9_epitope_Rep6 865.46978925921 865.46868993586 38.055 2 0.010536888961093775 0.00834400247229703 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 54395 7587 KYQRILERL True NCI_RA007_Epitope_Rep4 1217.72444080209 1217.72278490379 35.833 3 0.010535226996400068 0.00834400247229703 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant'] 96374 15345 SEGSPLVVLP True H1975_Epitope_Rep2 996.54916177872 996.54861496793 64.183 1 0.01052816973035383 0.00834400247229703 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET'] 88054 18817 QVVGGIYGV True PC9_epitope_Rep1 890.4861675993399 890.48561496793 77.166 1 0.010510785672283493 0.00834400247229703 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 40821 14719 HVLDDFVKV True PC9_epitope_Rep6 1070.5760452329 1070.57494993586 68.563 2 0.010510181694414205 0.00834400247229703 0.9438714419765777 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1'] 106337 9618 SVSDLFNTK True NCI_RA007_Epitope_Rep3 1009.50802524273 1009.50692993586 44.914 2 0.010471597201407872 0.008365337924336733 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 84541 12489 QHAEPWVV True PC9_epitope_Rep4 964.4766655447999 964.47556993586 55.847 2 0.010464035583928366 0.008365337924336733 0.9438714419765777 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7'] 103590 9722 SRDKSFLL True PC9_epitope_Rep2 964.5341804209199 964.53308993586 42.736 2 0.01043967557989264 0.008365337924336733 0.9438714419765777 ['ENST00000563040.5_1_16:30007580-30010601:+|nuORF', 'nc|ENSG00000169592|Q8NBZ0-2|INO80E', 'ENSG00000169592|ENST00000563197|INO80E'] 31980 10355 GETEDTFIA True H1975_Epitope_Rep3 981.4291062156899 981.42855496793 44.884 1 0.010436315428936544 0.008365337924336733 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'ENST00000522954.1_1_17:4859850-4860339:+|nuORF', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 48954 9781 KEYILVEEA True H1975_Epitope_Rep2 1092.5702911461199 1092.56918993586 42.609 2 0.010420918519421864 0.008381859890594671 0.9438714419765777 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2', 'ENST00000478055.1_1_5:131553347-131562829:-|nuORF'] 75592 18863 NQQLPIESQMV True PC9_epitope_Rep4 1285.63363676201 1285.63252993586 80.644 2 0.010408933607162812 0.008381859890594671 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 24598 20223 FAMPYFIQV True NCI_RA007_Epitope_Rep5 1114.55213898418 1114.5510499358602 84.729 2 0.010355127779761919 0.008381859890594671 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 130706 10004 VVDGTPLVA True NCI_RA007_Epitope_Rep4 869.4858332461699 869.48528496793 45.324 1 0.010348044475174937 0.008381859890594671 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 17085 11057 EGRDTHYLI True PC9_epitope_Rep3 1102.54072235334 1102.5396299358601 47.528 2 0.0103275978448699 0.008381859890594671 0.9438714419765777 ['TENM1|p.F2575L|1|0.89|ENSG00000009694|chrX:124380991-124380991|A/G|missense_variant'] 61295 20186 LLDVPTAAV True PC9_epitope_Rep1 897.5171333744499 897.51602993586 82.476 2 0.01031251286351155 0.008381859890594671 0.9438714419765777 ['ENSG00000216490|ENST00000407280|IFI30'] 100138 21167 SLLDKIIGA True PC9_epitope_Rep3 928.5593325396 928.55822993586 86.707 2 0.010298766669721243 0.008381859890594671 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 112973 18218 TPSIPVLTA True PC9_epitope_Rep6 897.51713337445 897.51602993586 82.718 2 0.010289295894753742 0.008381859890594671 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 58079 17537 LERQYQLL True PC9_epitope_Rep3 1061.58694426977 1061.58584993586 72.641 2 0.01027607866136566 0.008381859890594671 0.9438714419765777 ['PTGS1|p.R244L|1|0.21|ENSG00000095303|chr9:122381716-122381716|G/T|missense_variant'] 60406 8198 LIIYSRNQ True NCI_RA007_Epitope_Rep5 1005.5607295219299 1005.55962993586 38.213 2 0.01025853227970742 0.008381859890594671 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.T725S|2|0.23|ENSG00000181544|chrX:14843974-14843974|T/A|missense_variant'] 116196 13800 TVTNAVVTV True PC9_epitope_Rep5 902.50729696674 902.50618993586 58.1 2 0.010257720153873644 0.008381859890594671 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 38697 8647 HHSGNTYFL True PC9_epitope_Rep4 1074.48829285766 1074.4871899358602 40.751 2 0.010223561510132042 0.008381859890594671 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 136423 13462 YHFSSSEL True PC9_epitope_Rep1 968.4239612655999 968.42286993586 56.639 2 0.010212433477481601 0.008381859890594671 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 108554 11256 TEGKALLYL True H1975_Epitope_Rep2 1006.5698972232999 1006.56880993586 48.341 2 0.010208418365073883 0.008381859890594671 0.9438714419765777 ['ENST00000349457.7_1_16:57609483-57609783:+|nuORF'] 76898 7300 NVKVDPEIQ True PC9_epitope_Rep6 1040.5502244078798 1040.54912993586 37.227 2 0.010201034030780813 0.008381859890594671 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'KRT2|p.L163P|1|0.23|ENSG00000172867|chr12:52651655-52651655|A/G|missense_variant'] 132548 17732 VYPGYYLTF True NCI_RA007_Epitope_Rep4 1121.54334812229 1121.5422499358601 76.747 2 0.01019317855366909 0.008381859890594671 0.9438714419765777 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 119346 20980 VENAVVLTV True PC9_epitope_Rep3 942.5385970950199 942.53750993586 85.979 2 0.010189206498795756 0.008381859890594671 0.9438714419765777 ['ENSG00000186190|ENST00000375494|BPIFB3'] 95986 3692 SEAEIQAKA True NCI_RA007_Epitope_Rep4 945.4767251144498 945.47562993586 20.315 2 0.010185504634244882 0.008381859890594671 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 74847 13532 NLQEAEEWYK True PC9_epitope_Rep6 1308.59863115228 1308.5975299358602 63.781 2 0.010174069323972752 0.008381859890594671 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 90543 7194 RKFLDGNEL True NCI_RA007_Epitope_Rep3 1090.5771078620598 1090.5760099358602 35.41 2 0.010160729053169167 0.008381859890594671 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 38085 14472 HENILGFIA True H1975_Epitope_Rep2 1012.5341804209199 1012.53308993586 60.824 2 0.010159732175678364 0.008381859890594671 0.9438714419765777 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant'] 63256 18203 LPALAGVSA True PC9_epitope_Rep3 797.46470387877 797.46360993586 75.229 2 0.010143633286375507 0.008381859890594671 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 119782 9192 VEVDAAVTP True H1975_Epitope_Rep2 899.4600124211499 899.4594649679301 40.31 1 0.010133017903100294 0.008381859890594671 0.9438714419765777 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP'] 59888 5576 LHHDDPEVL True PC9_epitope_Rep6 1073.51417325233 1073.5130699358601 29.493 2 0.010132710325986841 0.008381859890594671 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 43655 22598 IILPEDIEL True PC9_epitope_Rep3 1053.59577761797 1053.59468993586 92.193 2 0.010116375387048532 0.008381859890594671 0.9438714419765777 ['ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1'] 11097 5300 DEDKEKTFEEK True NCI_RA007_Epitope_Rep1 1396.6358045066397 1396.63414490379 24.697 3 0.010096946086877447 0.008381859890594671 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 136259 15117 YGSDIVPF True H1975_Epitope_Rep1 896.4279840168799 896.42743496793 63.404 1 0.010089298951162324 0.008381859890594671 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 38873 17248 HIIENIVAV True PC9_epitope_Rep2 1006.58113061334 1006.58057496793 71.605 1 0.010068689351189045 0.008381859890594671 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 75693 18707 NQTVVRVFL True PC9_epitope_Rep1 1074.61857875122 1074.61748993586 76.745 2 0.010064579494388253 0.008381859890594671 0.9438714419765777 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 52599 10999 KPYTVVDVSA True PC9_epitope_Rep4 1077.57062549929 1077.5695299358601 50.085 2 0.010037901418263332 0.008381859890594671 0.9438714419765777 ['ENSG00000173517|ENST00000682557|PEAK1'] 8828 20636 AVFPSIVG True PC9_epitope_Rep3 788.4432401582 788.44269496793 84.647 1 0.010024232314522107 0.008402990670695398 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 140006 20454 YVLDDLIVA True PC9_epitope_Rep6 1019.5539128059899 1019.55280993586 91.392 2 0.010018013082338116 0.008402990670695398 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 79168 4892 PGDSDIIR True NCI_RA007_Epitope_Rep5 871.43994568291 871.43884993586 25.509 2 0.01000915680173031 0.008402990670695398 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 116973 21016 TYPNTYIF True PC9_epitope_Rep1 1017.48074786573 1017.47964993586 85.667 2 0.00998672857306344 0.008402990670695398 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 109551 4926 THAPATLEA True PC9_epitope_Rep4 909.45559574705 909.45448993586 25.545 2 0.009974238935396458 0.008402990670695398 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 138175 12809 YQNQGIYQV True PC9_epitope_Rep6 1111.52982331647 1111.5287299358602 60.773 2 0.009961218548013037 0.00842374525888683 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 96143 11100 SEEDPVTSIP True H1975_Epitope_Rep2 1072.49243474824 1072.49187496793 47.731 1 0.009957446757360855 0.00842374525888683 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 118821 5725 VEEGAPPPP True H1975_Epitope_Rep3 891.4337976733099 891.43324496793 27.05 1 0.009940953824862878 0.00842374525888683 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 105296 14437 STTNGGILTV True PC9_epitope_Rep6 961.50802524273 961.50692993586 67.423 2 0.00992787370224497 0.00842374525888683 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 24638 12278 FASEVSNVL True NCI_RA007_Epitope_Rep3 964.48656152216 964.48546993586 55.457 2 0.009909873950110514 0.00842374525888683 0.9438714419765777 ['ENSG00000136738|ENST00000377524|STAM', 'nc|ENSG00000136738|Q92783-2|STAM'] 107103 14546 SYMGHFDLL True NCI_RA007_Epitope_Rep4 1081.49026700361 1081.4891699358602 63.328 2 0.009905307554204611 0.00842374525888683 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 4019 4783 AHISGATSV True PC9_epitope_Rep3 841.4293809992101 841.42828993586 23.494 2 0.009902037071387686 0.00842374525888683 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 140640 13007 YYPAKIEAI True PC9_epitope_Rep6 1066.5698972233 1066.5688099358601 61.613 2 0.00988021865255748 0.008445424476295479 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.V175Sfs*48|1|0.38|ENSG00000129292|chr8:132803834-132803834|G/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 132857 13560 VYTSGIYNI True NCI_RA007_Epitope_Rep1 1028.51786165044 1028.51676993586 56.755 2 0.009880037170759077 0.008445424476295479 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1'] 52742 16080 KQLSDTSIIAV True PC9_epitope_Rep1 1173.6605031328502 1173.6594099358601 66.666 2 0.009868220639031953 0.008466168397380779 0.9438714419765777 ['ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000145743|Q9UF56-3|FBXL17', 'nc|ENSG00000145743|Q9UF56-2|FBXL17'] 25192 8849 FEADPPGQV True H1975_Epitope_Rep1 958.4396113297399 958.4390649679301 38.959 1 0.009863782790580212 0.008466168397380779 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 132199 9405 VYKDHQTITI True PC9_epitope_Rep1 1216.6451874218799 1216.6435349037902 41.035 3 0.009843046904977167 0.008466168397380779 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 134421 14727 WTEMNTIVY True H1975_Epitope_Rep1 1155.52704643515 1155.52647496793 61.868 1 0.009835969721786327 0.008466168397380779 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 123389 6617 VIDDTNITR True PC9_epitope_Rep4 1045.5403880001702 1045.53928993586 32.612 2 0.00981755497935064 0.008466168397380779 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 25411 7560 FEKIEEVSA True H1975_Epitope_Rep2 1050.5233409537 1050.5222499358601 34.033 2 0.00981569997150365 0.008466168397380779 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 38793 9403 HHYSGNNIEL True PC9_epitope_Rep3 1182.5417849825 1182.54013490379 41.105 3 0.009813518908392682 0.008466168397380779 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 47315 6649 IYGGSVTG True NCI_RA007_Epitope_Rep2 752.3704691407601 752.36992496793 30.473 1 0.009738675420649358 0.00848466149506347 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 139525 19980 YTLDGGDIINA True PC9_epitope_Rep2 1150.5506183307 1150.55007496793 82.255 1 0.009719851966735008 0.00848466149506347 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 63803 8849 LPSQPPPAA True PC9_epitope_Rep1 876.4705175351999 876.46942993586 38.879 2 0.009674604325098021 0.00848466149506347 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD'] 6365 7634 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 34.36 2 0.009669471314821288 0.00848466149506347 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 43767 9169 IIYGGSVTG True NCI_RA007_Epitope_Rep2 865.45453311789 865.4539849679301 40.274 1 0.009646206843941098 0.00848466149506347 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 108563 6407 TEGYSPPAA True H1975_Epitope_Rep2 891.3974121645898 891.39686496793 29.568 1 0.009625281774509187 0.00848466149506347 0.9438714419765777 ['ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1'] 59779 13139 LHAAAVLL True PC9_epitope_Rep4 806.50142374066 806.50032993586 58.434 2 0.009603274553251802 0.00848466149506347 0.9438714419765777 ['nc|ENSG00000074410|O43570-2|CA12', 'ENSG00000074410|ENST00000178638|CA12'] 87896 8300 QVMQGM[Oxidation]GVSA True PC9_epitope_Rep1 1022.4525019763398 1022.4514099358599 36.759 2 0.009594291760003057 0.00848466149506347 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 71210 10890 [Acetylation]-M[Oxidation]FQVPDSEGGR True H1975_Epitope_Rep3 1279.5503017576098 1279.54920993586 46.973 2 0.009586042578015163 0.00848466149506347 0.9438714419765777 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'ENST00000569256.5_1_16:1728292-1741847:+|nuORF', 'ENST00000567717.1_1_16:1728292-1742376:+|nuORF'] 46351 10331 ITGTASTILY True H1975_Epitope_Rep1 1038.55972646242 1038.5586299358602 44.686 2 0.009584901266417457 0.00848466149506347 0.9438714419765777 ['ENSG00000125304|ENST00000376387|TM9SF2'] 59883 5946 LHHDDPEVL True PC9_epitope_Rep4 1073.51417325233 1073.5130699358601 29.801 2 0.009574401773632864 0.00848466149506347 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 137846 8091 YPIEHGIITN True H1975_Epitope_Rep3 1155.5924235730297 1155.5913299358601 36.096 2 0.00957200332042339 0.00848466149506347 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 35378 16463 GTASGFYTV True PC9_epitope_Rep5 901.4181476091701 901.4175949679301 68.324 1 0.009570029017442812 0.00848466149506347 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 5063 15629 ALLLLC[Carbamidomethyl]GEDD True H1975_Epitope_Rep3 1117.53252601784 1117.53197496793 65.533 1 0.009568517967042665 0.00848466149506347 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF'] 89075 4518 REERPPTLSA True H1975_Epitope_Rep2 1154.6043852390599 1154.6027249037902 22.491 3 0.009560009107311177 0.00848466149506347 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 4638 12980 ALASHLIEA True PC9_epitope_Rep5 923.5076313199099 923.50652993586 54.936 2 0.009558496249840917 0.00848466149506347 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 119214 4194 VEKPVGVAA True H1975_Epitope_Rep3 868.5018176634799 868.50072993586 21.25 2 0.00954978586954303 0.00848466149506347 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'ENST00000562659.1_1_16:85698640-85699994:+|nuORF'] 94610 13607 RYKPGEPITF True PC9_epitope_Rep5 1206.6397081186199 1206.6386099358601 57.362 2 0.009547563195990824 0.00848466149506347 0.9438714419765777 ['ENSG00000213047|ENST00000620048|DENND1B', 'DENND1B|p.E705Kfs*3|1|0.3|ENSG00000213047|chr1:197510675-197510675|C/-|frameshift_variant', 'nc|ENSG00000213047|Q6P3S1-4|DENND1B', 'nc|ENSG00000213047|Q6P3S1-2|DENND1B', 'nc|ENSG00000213047|Q6P3S1-5|DENND1B'] 116881 11356 TYNSSGAYRF True PC9_epitope_Rep1 1164.5199869087598 1164.5188899358602 48.56 2 0.00954670234122897 0.00848466149506347 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 123576 13023 VIISAPSAD True PC9_epitope_Rep2 871.46509780159 871.46400993586 55.374 2 0.00953897838923292 0.008498645941125961 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 131797 10111 VYANGIRNI True PC9_epitope_Rep2 1018.5559784946599 1018.55488993586 44.229 2 0.009533365389180901 0.008498645941125961 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 27939 19835 FQPPPGVNI True PC9_epitope_Rep1 967.5127167003499 967.51160993586 81.111 2 0.009532607471470042 0.008498645941125961 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 5864 16351 APGNPVLAV True PC9_epitope_Rep2 836.4756029156399 836.4750549679301 68.139 1 0.009528842830715305 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 61962 15321 LLLPGELA True H1975_Epitope_Rep3 824.5007550343199 824.50020496793 64.341 1 0.009524697025575266 0.008498645941125961 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'H2BC15|p.V99L|1|0.32|ENSG00000233822|chr6:27838956-27838956|G/T|missense_variant', 'H2BC10|p.V99L|1|0.2|ENSG00000278588|chr6:26273270-26273270|G/C|missense_variant', 'nc|ENSG00000121413|Q8TBC5-2|ZSCAN18', 'nc|ENSG00000121413|Q8TBC5-4|ZSCAN18', 'ENST00000594191.5_1_19:58598487-58609571:-|nuORF', 'ENST00000598497.1_1_19:58600016-58601841:-|nuORF', 'ENST00000600318.1_1_19:58600016-58609306:-|nuORF', 'ENSG00000121413|ENST00000601144|ZSCAN18', 'ZSCAN18|p.P159H|1|0.06|ENSG00000121413|chr19:58088765-58088765|G/T|missense_variant', 'H2BC7|p.K109N|1|0.14|ENSG00000277224|chr6:26199885-26199885|G/C|missense_variant', 'nc|ENSG00000121413|Q8TBC5-3|ZSCAN18', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 71885 5709 MPNGTPHPTA True PC9_epitope_Rep3 1021.46511488493 1021.46400993586 27.033 2 0.009521951520623743 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 130398 15480 VTVPKVGEI True PC9_epitope_Rep5 940.5593325395998 940.55822993586 64.554 2 0.009454934112395884 0.008498645941125961 0.9438714419765777 ['AHNAK|p.E1477del|1|0.21|ENSG00000124942|chr11:62529985-62529987|CTT/-|inframe_deletion'] 127620 12578 VRDEPVLL True PC9_epitope_Rep4 939.5389314481899 939.53782993586 56.209 2 0.009454118060643547 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000102384|Q92674-2|CENPI', 'ENSG00000102384|ENST00000682095|CENPI'] 31998 13071 GETIFVTAP True NCI_RA007_Epitope_Rep4 933.48074786573 933.47964993586 57.377 2 0.009452039515497323 0.008498645941125961 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 115204 7643 TVAVGVIK True PC9_epitope_Rep2 785.50108938749 785.49998993586 34.767 2 0.009425581620437891 0.008498645941125961 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 69703 21735 LVYPGAFNL True PC9_epitope_Rep2 992.5331177917599 992.53202993586 89.08 2 0.009411590648610626 0.008498645941125961 0.9438714419765777 ['NIT2|p.Q171K|1|0.16|ENSG00000114021|chr3:100348808-100348808|C/A|missense_variant', 'ENST00000478856.5_1_3:100065035-100067726:+|nuORF', 'ENST00000465368.5_1_3:100064894-100074109:+|nuORF', 'ENSG00000114021|ENST00000394140|NIT2'] 91188 17882 RLQELFAV True PC9_epitope_Rep1 974.5549158654998 974.55380993586 73.576 2 0.009406262431246157 0.008498645941125961 0.9438714419765777 ['ENST00000340291.6_1_9:35812160-35812229:-|nuORF'] 11838 18337 DHMRFISEL True PC9_epitope_Rep5 1146.54917886206 1146.54754490379 75.548 3 0.00939617439609223 0.008498645941125961 0.9438714419765777 ['ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 6688 13199 AQAPGVITGV True PC9_epitope_Rep6 911.5076313199099 911.50652993586 62.417 2 0.009383680476430147 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 6258 5492 APRPPTAAP True PC9_epitope_Rep1 876.4817509252399 876.48064993586 25.954 2 0.0093595797029006 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ENSG00000184939|ENST00000563169|ZFP90'] 110216 21803 TIEDGIFEV True PC9_epitope_Rep5 1021.4967918526899 1021.49568993586 88.897 2 0.009347678156450974 0.008498645941125961 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 132914 17691 VYTVVDEMF True NCI_RA007_Epitope_Rep1 1101.5052483614097 1101.5041499358601 72.952 2 0.0093453216697401 0.008498645941125961 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 21717 7339 ERYSGNQVL True PC9_epitope_Rep2 1064.5250722892 1064.5239699358601 33.611 2 0.009337435470063929 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 38836 13108 HIGDAVVI True PC9_epitope_Rep1 822.4599528515 822.45884993586 55.287 2 0.009320247093962208 0.008498645941125961 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 14820 16907 DYDSVFHHL True PC9_epitope_Rep1 1131.4985231881901 1131.49687490379 69.857 3 0.009319088315015597 0.008498645941125961 0.9438714419765777 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32573515-32573971:-|nuORF'] 85110 18057 QISDTSVVL True PC9_epitope_Rep1 960.51277627 960.51166993586 74.249 2 0.00931893480872743 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 28702 18664 FSTTVIQNV True PC9_epitope_Rep5 1007.5287606873098 1007.52766993586 76.814 2 0.009314717794500896 0.008498645941125961 0.9438714419765777 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.T122Ifs*2|1|0.21|ENSG00000100554|chr14:67345856-67345859|CCAG/-|frameshift_variant'] 378 16168 AALDIYETL True NCI_RA007_Epitope_Rep5 1007.51752729727 1007.51642993586 68.927 2 0.009308436000516182 0.008498645941125961 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ITCH-DYNLRB1|4|fusion', 'ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH'] 72533 21123 MVDGTLLLL True PC9_epitope_Rep6 973.5518046310099 973.55125496793 94.09 1 0.009282555273012581 0.008498645941125961 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 66298 8919 LSQILAGR True PC9_epitope_Rep2 856.5130510535199 856.51194993586 39.665 2 0.009277144833314523 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000133115|Q8TAV4-2|STOML3', 'ENSG00000133115|ENST00000379631|STOML3'] 107701 17603 TALLKIEGV True PC9_epitope_Rep1 942.57498260374 942.57388993586 72.503 2 0.009274999113799618 0.008498645941125961 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 53213 10788 KTDHFIFTY True H1975_Epitope_Rep2 1170.57095985246 1170.5693249037902 46.524 3 0.00921737713465515 0.008498645941125961 0.9438714419765777 ['ENSG00000116212|ENST00000371370|LRRC42'] 20990 7981 ERANGMEL True PC9_epitope_Rep1 918.4229157197799 918.42180993586 35.521 2 0.009182151481141968 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'nc|ENSG00000164548|Q13595-2|TRA2A', 'ENST00000494255.5_1_7:23547037-23556014:-|nuORF'] 125849 12490 VNQIGSVTESL True NCI_RA007_Epitope_Rep1 1145.59281749585 1145.59227496793 52.562 1 0.00917924686955456 0.008498645941125961 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 89241 3710 REKGFDQAP True NCI_RA007_Epitope_Rep4 1046.5145076054998 1046.5134099358602 20.397 2 0.009174874174346035 0.008498645941125961 0.9438714419765777 ['ENST00000462349.5_1_21:44473992-44479496:-|nuORF', 'ENSG00000160200|ENST00000398165|CBS', 'nc|ENSG00000160200|P35520-2|CBS'] 102118 8064 SPQQPGLSA True PC9_epitope_Rep1 883.4399456829099 883.43884993586 35.842 2 0.009171127281007186 0.008498645941125961 0.9438714419765777 ['ENSG00000170498|ENST00000367194|KISS1'] 128443 3678 VSELKEELKK True NCI_RA007_Epitope_Rep4 1201.69180326113 1201.69015490379 20.257 3 0.009165501547327667 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF'] 72222 6042 MRVSDRQQL True PC9_epitope_Rep5 1131.5818759726699 1131.5802449037901 28.233 3 0.009161245928138528 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 115724 12782 TVLGSLQKV True PC9_epitope_Rep4 943.57023157647 943.56912993586 57.028 2 0.009154600903222824 0.008498645941125961 0.9438714419765777 ['ENSG00000176092|ENST00000308182|CRYBG2', 'ENST00000520372.5_1_1:26655223-26662846:-|nuORF'] 114131 5213 TRSITNTTV True PC9_epitope_Rep2 991.52982331647 991.52872993586 25.442 2 0.00914731266408551 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 120259 16979 VFPDKGYSF True PC9_epitope_Rep1 1058.5072969667401 1058.5061899358602 70.133 2 0.009146049971992812 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF', 'TIA1|p.R244Q|1|0.47|ENSG00000116001|chr2:70216241-70216241|C/T|missense_variant', 'ENST00000477415.5_1_2:70443338-70451751:-|nuORF'] 112668 2550 TPFQGQGHGA True PC9_epitope_Rep4 998.4569927293797 998.45588993586 14.721 2 0.009134759861546965 0.008498645941125961 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 129057 10582 VTANTMENV True PC9_epitope_Rep3 977.44879611445 977.44768993586 45.65 2 0.009134292635767888 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 118898 8372 VEEPQALAA True H1975_Epitope_Rep2 926.4709114580198 926.46980993586 37.156 2 0.009130901352477959 0.008498645941125961 0.9438714419765777 ['ENSG00000105447|ENST00000253237|GRWD1'] 113817 7323 TREAGSALL True PC9_epitope_Rep4 916.4977949121999 916.49668993586 35.496 2 0.009119147597530184 0.008498645941125961 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2', 'CCNA2|p.A20P|1|0.15|ENSG00000145386|chr4:121823571-121823571|C/G|missense_variant'] 116601 18058 TYGEIFEKF True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 82.09 2 0.009118846843212085 0.008498645941125961 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 21268 5721 ERIMKAQAL True PC9_epitope_Rep4 1058.5906497512199 1058.58954993586 28.827 2 0.009107395748053568 0.008498645941125961 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 25463 7950 FENEMATAA True NCI_RA007_Epitope_Rep4 982.4065969492999 982.40548993586 37.325 2 0.009095077957302689 0.008498645941125961 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ACTG2|p.S234Y|2|0.25|ENSG00000163017|chr2:73914767-73914767|C/A|missense_variant', 'nc|ENSG00000163017|P63267-2|ACTG2'] 26840 17424 FLEPVNPRL True PC9_epitope_Rep5 1083.60767971435 1083.60658993586 72.022 2 0.009062629103526405 0.0085191626125432 0.9438714419765777 ['nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A', 'chr12:56598783-56598942|139|11.99|0.66|4.18|-|0|BAZ2A,None|1'] 36060 17151 GVDVTLPRV True PC9_epitope_Rep5 954.5498304850599 954.54872993586 70.993 2 0.009058016224994287 0.0085191626125432 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 108544 14381 TEGEPPFLP True H1975_Epitope_Rep2 985.4756624852898 985.47456993586 60.467 2 0.009052439617436833 0.0085191626125432 0.9438714419765777 ['ENSG00000241058|ENST00000377304|NSUN6'] 77202 18521 NYGRVFSEW True PC9_epitope_Rep2 1156.53015766964 1156.5290699358602 76.585 2 0.009047805578077552 0.0085191626125432 0.9438714419765777 ['ENST00000473417.5_1_3:125188296-125239016:-|nuORF', 'nc|ENSG00000114520|O95219-2|SNX4', 'ENST00000471751.5_1_3:125166625-125239024:-|nuORF', 'ENSG00000114520|ENST00000251775|SNX4'] 116259 17437 TVVAVVAGV True PC9_epitope_Rep4 813.4960040070499 813.49490993586 75.065 2 0.00903572859042881 0.0085191626125432 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 30730 16468 GANAILGVSL True NCI_RA007_Epitope_Rep2 913.5232813840499 913.52218993586 68.784 2 0.009022550489311155 0.0085191626125432 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 118087 7026 VATVSLPR True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 33.704 2 0.009005866377935556 0.0085191626125432 0.9438714419765777 ['CON__P00761'] 54281 11605 KYPNVFKKI True PC9_epitope_Rep3 1135.67536535135 1135.67371490379 49.654 3 0.008996570583701883 0.0085191626125432 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 108423 13899 TEEEVEMLVA True H1975_Epitope_Rep2 1148.5271060047999 1148.5260099358602 58.608 2 0.008991150546041613 0.008539484109516682 0.9438714419765777 ['nc|ENSG00000092841|P60660-2|MYL6', 'ENSG00000092841|ENST00000550697|MYL6', 'ENST00000548725.5_1_12:56553869-56554112:+|nuORF'] 109730 9542 THGPPVQL True PC9_epitope_Rep1 847.45520182423 847.45410993586 41.561 2 0.008937125741419676 0.008539484109516682 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 138590 8479 YRPVRQYVY True PC9_epitope_Rep2 1242.65094150866 1242.6493049037902 37.981 3 0.008928917141017208 0.008539484109516682 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A'] 138803 7075 YSDGPNPEV True H1975_Epitope_Rep2 976.4137905047199 976.41324496793 32.143 1 0.008916015484283632 0.008539484109516682 0.9438714419765777 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant'] 6371 6434 APRQPGLMA True PC9_epitope_Rep4 939.4960210903898 939.49492993586 31.844 2 0.008915625477867362 0.008539484109516682 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 79472 10290 PGPQTVLI True H1975_Epitope_Rep3 823.4803539429099 823.47924993586 44.631 2 0.008893008156464325 0.008539484109516682 0.9438714419765777 ['ENSG00000027001|ENST00000382172|MIPEP', 'ENST00000382172.3_1_13:24460505-24460568:-|nuORF', 'ENST00000424756.1_1_13:21875607-21878632:+|nuORF'] 46775 12345 IVCDVPSASA True PC9_epitope_Rep6 960.45863252216 960.45752993586 58.888 2 0.008878460073525388 0.008539484109516682 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 8857 12696 AVFPSIVGRPR True PC9_epitope_Rep2 1197.69822605425 1197.6971299358602 54.141 2 0.008874022899851263 0.008539484109516682 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 70982 16561 MEQISQFLQAA True H1975_Epitope_Rep2 1264.61217304144 1264.61106993586 68.927 2 0.008872074742162955 0.008539484109516682 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant'] 74419 12592 NIVHDLPAA True PC9_epitope_Rep5 948.5028802926399 948.50178993586 53.435 2 0.008856039931073858 0.00856130466360015 0.9438714419765777 ['nc|ENSG00000183527|O95456-2|PSMG1', 'ENSG00000183527|ENST00000331573|PSMG1', 'ENST00000411828.5_1_21:40547518-40555177:-|nuORF'] 71001 9601 MEQQTLSIA True H1975_Epitope_Rep1 1019.4957463068699 1019.4951749679301 41.855 1 0.008839279189074683 0.008582935363894453 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 54470 8265 LAAARLAAA True PC9_epitope_Rep1 826.5024863698198 826.50138993586 36.624 2 0.008835544168401092 0.008582935363894453 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 140796 10546 YYSHLEGARF True PC9_epitope_Rep2 1241.5829215184897 1241.58127490379 45.885 3 0.008799617369589147 0.008601913980860191 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 48381 3136 KEAPPMEKP True NCI_RA007_Epitope_Rep2 1025.52156713189 1025.52046993586 16.829 2 0.008793020969215571 0.008601913980860191 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15'] 45345 13732 ISDEGIAYL True H1975_Epitope_Rep1 979.4862271689899 979.4856749679301 57.959 1 0.008789168411275798 0.008601913980860191 0.9438714419765777 ['ENSG00000163918|ENST00000296273|RFC4', 'nc|ENSG00000163918|P35249-2|RFC4', 'ENST00000494047.5_1_3:186509405-186522502:-|nuORF', 'ENST00000479307.5_1_3:186508099-186512490:-|nuORF'] 5126 20963 ALMPVLNQV True PC9_epitope_Rep2 983.54738795691 983.54628993586 86.083 2 0.00878651147607904 0.008601913980860191 0.9438714419765777 ['ENSG00000223496|ENST00000435634|EXOSC6'] 59016 17958 LGAPALEGV True PC9_epitope_Rep2 825.45961849833 825.45852993586 74.38 2 0.008786416187147626 0.008601913980860191 0.9438714419765777 ['ENSG00000172478|ENST00000388934|MAB21L4', 'nc|ENSG00000172478|Q08AI8-3|MAB21L4', 'nc|ENSG00000172478|Q08AI8-2|MAB21L4'] 132244 18581 VYKTIMEQF True PC9_epitope_Rep3 1157.57908200801 1157.5779899358602 76.698 2 0.008759127302448988 0.008601913980860191 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 96862 8088 SESRFFVSS True H1975_Epitope_Rep2 1044.48762415132 1044.48652993586 36.057 2 0.00875491941369413 0.008601913980860191 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 81217 18524 PPLPLPPPP True PC9_epitope_Rep5 923.5480395799099 923.54694993586 76.277 2 0.008753177355825923 0.008601913980860191 0.9438714419765777 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'MAMLD1|p.P359L|1|0.23|ENSG00000013619|chrX:150470649-150470649|C/T|missense_variant', 'ENSG00000188493|ENST00000378313|ACTMAP'] 109736 9781 THGPPVQL True PC9_epitope_Rep3 847.45520182423 847.45410993586 42.576 2 0.008752826137350013 0.008601913980860191 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 21769 11258 ESDEVELSY True H1975_Epitope_Rep3 1069.44515020265 1069.4445749679298 48.407 1 0.008749593061221665 0.008601913980860191 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 110046 16875 THYDHVLIEL True PC9_epitope_Rep2 1238.6295373577398 1238.62789490379 70.157 3 0.008728981932590946 0.008601913980860191 0.9438714419765777 ['ENSG00000076003|ENST00000264156|MCM6'] 31671 14457 GEIDYEAIV True H1975_Epitope_Rep1 1007.48114178855 1007.48057496793 60.806 1 0.008721323246067673 0.008601913980860191 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6'] 129544 13541 VTGAVVTAV True PC9_epitope_Rep2 815.47526856247 815.47472496793 57.378 1 0.008719927850881326 0.008601913980860191 0.9438714419765777 ['ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 87392 18701 QTDPTLLSV True PC9_epitope_Rep4 972.5127762699999 972.51222496793 80.015 1 0.008715729678265807 0.008601913980860191 0.9438714419765777 ['ENSG00000144867|ENST00000678299|SRPRB'] 28199 10123 FRQQRPLEF True PC9_epitope_Rep4 1219.6461904813898 1219.64455490379 46.612 3 0.008715371185360312 0.008601913980860191 0.9438714419765777 ['ENSG00000089693|ENST00000203630|MLF2'] 118097 9981 VATVSLPR True PC9_epitope_Rep3 841.5021520166499 841.50104993586 43.347 2 0.008714080426043378 0.008601913980860191 0.9438714419765777 ['CON__P00761'] 72071 15397 MRCALALSA True PC9_epitope_Rep5 934.4728431176599 934.47174993586 64.232 2 0.008711931855868296 0.008618604753424356 0.9438714419765777 ['ENSG00000128567|ENST00000378555|PODXL', 'nc|ENSG00000128567|O00592-2|PODXL'] 113361 5721 TQKSLSLSPG True NCI_RA007_Epitope_Rep5 1016.5502244078799 1016.5496749679301 28.694 1 0.008705058816755628 0.008618604753424356 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 106683 10429 SYANVQDGF True NCI_RA007_Epitope_Rep3 999.4297749220299 999.42866993586 48.09 2 0.00870329928324824 0.008618604753424356 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 6249 6955 APRLQSEVA True PC9_epitope_Rep3 969.5243440132099 969.52324993586 31.765 2 0.00867770573074349 0.008618604753424356 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 126447 14268 VPLRFPAGSAA True PC9_epitope_Rep1 1084.6029286870798 1084.60182993586 59.705 2 0.008673203254528222 0.008618604753424356 0.9438714419765777 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 118095 9796 VATVSLPR True PC9_epitope_Rep3 841.5021520166499 841.50104993586 42.635 2 0.00865450511508781 0.008618604753424356 0.9438714419765777 ['CON__P00761'] 108258 15389 TEAPPIIFA True H1975_Epitope_Rep2 957.5171333744499 957.51658496793 64.352 1 0.00865097275923939 0.008618604753424356 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 72584 18018 MVPTSQGFTEV True PC9_epitope_Rep5 1194.5590748394202 1194.55796993586 74.322 2 0.008644220321220107 0.008618604753424356 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2', 'ENST00000465154.1_1_9:130272232-130272589:-|nuORF'] 72525 19394 MVDGTLLLL True NCI_RA007_Epitope_Rep5 973.5518046310099 973.55125496793 81.484 1 0.00863647950128707 0.008618604753424356 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 76534 9384 NTDNNLAVY True H1975_Epitope_Rep2 1022.4668887067398 1022.46637496793 41.058 1 0.008626229346766321 0.008618604753424356 0.9438714419765777 ['ENSG00000204019|ENST00000371894|CT83', 'CT83|p.D61Y|1|0.75|ENSG00000204019|chrX:116461902-116461902|C/A|missense_variant'] 40212 8883 HRGTGLVL True PC9_epitope_Rep1 851.49773534255 851.49662993586 39.007 2 0.008624279858610265 0.008618604753424356 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 136516 8940 YHNPTANSF True PC9_epitope_Rep1 1049.45665837621 1049.45556993586 39.228 2 0.008611589112382969 0.008618604753424356 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 6367 7818 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 35.062 2 0.008594364087611746 0.008618604753424356 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 24419 2853 FAGDDAPR True H1975_Epitope_Rep1 847.38243080679 847.38132993586 14.588 2 0.008573345394978556 0.008618604753424356 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 108243 9167 TEALHFVAA True H1975_Epitope_Rep1 957.4919812557698 957.49088993586 40.166 2 0.008544475231223236 0.008618604753424356 0.9438714419765777 ['ENSG00000125817|ENST00000379751|CENPB'] 26766 15414 FLDPNNIPKA True PC9_epitope_Rep5 1127.5975089534702 1127.59640993586 64.299 2 0.00854150658727363 0.008618604753424356 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8', 'NARS2-ALG8|2|fusion', 'NARS2-ALG8|1|fusion', 'ENST00000532552.2_1_11:77817934-77820625:-|nuORF'] 77021 23141 NVVEALIAL True PC9_epitope_Rep3 940.5593325395998 940.55822993586 94.279 2 0.00853673488461852 0.008618604753424356 0.9438714419765777 ['ENSG00000242028|ENST00000442995|HYPK', 'ENST00000458412.1_2_15:44093902-44094001:+|nuORF'] 36776 9827 GVPENGYQTLY True H1975_Epitope_Rep3 1239.5771674317102 1239.57606993586 42.826 2 0.00851650128830494 0.008618604753424356 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 135723 5021 YEKDIAAYR True NCI_RA007_Epitope_Rep4 1127.5611234447497 1127.55946490379 25.799 3 0.00851534730576884 0.008618604753424356 0.9438714419765777 ['ENSG00000189403|ENST00000341423|HMGB1', 'ENSG00000164104|ENST00000296503|HMGB2'] 81213 18733 PPLPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 76.845 2 0.008474505224119896 0.008618604753424356 0.9438714419765777 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'MAMLD1|p.P359L|1|0.23|ENSG00000013619|chrX:150470649-150470649|C/T|missense_variant', 'ENSG00000188493|ENST00000378313|ACTMAP'] 9916 17841 AYPHNLMTF True PC9_epitope_Rep2 1092.50625142092 1092.5051499358601 73.924 2 0.008469635116386952 0.008618604753424356 0.9438714419765777 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1', 'TRAM1|p.M165V|2|0.33|ENSG00000067167|chr8:70594583-70594583|T/C|missense_variant'] 46124 14751 ITAGKLVTL True PC9_epitope_Rep2 914.58006798418 914.57896993586 62.006 2 0.00846044904875691 0.008618604753424356 0.9438714419765777 ['ENSG00000139410|ENST00000403593|SDSL'] 113126 11234 TQAPGNPVL True PC9_epitope_Rep4 895.4763311916299 895.4752299358599 50.987 2 0.008437972275783816 0.008618604753424356 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 26347 18476 FIFSDTHEL True PC9_epitope_Rep4 1107.52367530687 1107.52256993586 79.139 2 0.008435216043237612 0.008618604753424356 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 140804 15132 YYSPHGHILVL True PC9_epitope_Rep2 1297.68190728377 1297.68080993586 63.463 2 0.008429267888996256 0.008618604753424356 0.9438714419765777 ['nc|ENSG00000144895|Q9BY44-2|EIF2A', 'nc|ENSG00000144895|Q9BY44-4|EIF2A', 'nc|ENSG00000144895|Q9BY44-3|EIF2A', 'ENSG00000144895|ENST00000460851|EIF2A'] 101762 6233 SPHPPSEVTA True PC9_epitope_Rep1 1020.48762415132 1020.48652993586 28.788 2 0.008421133444841713 0.008618604753424356 0.9438714419765777 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 45995 9094 ISTEVNPKL True PC9_epitope_Rep6 999.56006081559 999.55896993586 45.064 2 0.008417996438568802 0.008618604753424356 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 39720 9419 HPVLLTEA True PC9_epitope_Rep4 878.4861675993401 878.48561496793 43.841 1 0.008396146022327342 0.008618604753424356 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000480947.1_1_10:104243895-104247966:-|nuORF', 'ENST00000451664.1_1_2:98275340-98280353:-|nuORF', 'ENST00000460427.2_1_2:98275340-98276060:-|nuORF', 'POTEF|p.E799K|1|0.23|ENSG00000196604|chr2:130075077-130075077|C/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENSG00000115073|ENST00000289228|ACTR1B'] 54630 22830 LADLSELQL True PC9_epitope_Rep2 1000.5440763982799 1000.54296993586 93.305 2 0.008380647005771884 0.008634326390719748 0.9438714419765777 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant'] 70196 24199 LYLPFSLTF True PC9_epitope_Rep3 1099.59538369515 1099.5942899358602 98.372 2 0.00837812689789548 0.008634326390719748 0.9438714419765777 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 68493 12334 LTVKENLSL True NCI_RA007_Epitope_Rep4 1015.59136094387 1015.59026993586 54.441 2 0.008369108335540883 0.008634326390719748 0.9438714419765777 ['ENSG00000154262|ENST00000284425|ABCA6', 'nc|ENSG00000154262|Q8N139-2|ABCA6', 'ABCA6|p.G1034Afs*30|1|0.12|ENSG00000154262|chr17:69097939-69097939|C/-|frameshift_variant', 'ENST00000590311.5_1_17:67109638-67111556:-|nuORF', 'ENST00000589803.5_1_17:67102167-67114054:-|nuORF'] 26695 14711 FLDDSTALY True H1975_Epitope_Rep1 1043.48114178855 1043.48004993586 61.804 2 0.00836231816937856 0.008634326390719748 0.9438714419765777 ['ENSG00000100558|ENST00000216446|PLEK2'] 27514 19436 FPFAPPAAA True PC9_epitope_Rep4 887.4541391950698 887.45304993586 82.874 2 0.008360706243172186 0.008634326390719748 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 69337 22512 LVPSDFLSV True PC9_epitope_Rep5 975.52769805815 975.52660993586 91.596 2 0.00835501326054151 0.008634326390719748 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 54481 8274 LAAARLAAA True PC9_epitope_Rep5 826.5024863698198 826.50138993586 36.767 2 0.008349531060820177 0.008634326390719748 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 56983 7761 LEEDHACIP True H1975_Epitope_Rep1 1025.4487961144498 1025.4476899358601 34.81 2 0.00834621366723255 0.008634326390719748 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 102303 6859 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 31.786 2 0.008345624134475784 0.008634326390719748 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 84820 12241 QHLLDTNQL True PC9_epitope_Rep4 1080.5563724174801 1080.55526993586 54.902 2 0.008342460384413507 0.008634326390719748 0.9438714419765777 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF', 'EHF|p.D69V|2|0.38|ENSG00000135373|chr11:34646547-34646547|A/T|missense_variant'] 57739 7772 LENMPSAEA True H1975_Epitope_Rep3 960.4222470134399 960.42114993586 34.88 2 0.008330684335842007 0.008634326390719748 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 88065 17602 QVVGGIYGV True PC9_epitope_Rep4 890.4861675993399 890.48561496793 75.723 1 0.008327346126582523 0.008634326390719748 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 85020 19895 QIGAKFWEV True PC9_epitope_Rep3 1076.5654805492 1076.5643899358602 81.767 2 0.00829883384802446 0.008634326390719748 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENST00000489942.1_1_6:3155224-3157697:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF', 'ENSG00000261456|ENST00000568584|TUBB8'] 123574 8989 VIISAPSAD True H1975_Epitope_Rep1 871.46509780159 871.46454496793 39.482 1 0.008284017630581082 0.008634326390719748 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 32350 16784 GGDDSFNTF True PC9_epitope_Rep2 958.3668403123 958.36574993586 69.808 2 0.008274002706438197 0.008634326390719748 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 118099 8758 VATVSLPR True PC9_epitope_Rep4 841.5021520166499 841.50104993586 41.195 2 0.008261139690389845 0.008634326390719748 0.9438714419765777 ['CON__P00761'] 58451 16275 LEWPSLTA True H1975_Epitope_Rep2 915.4701831820299 915.46908993586 67.815 2 0.008244788524279465 0.008634326390719748 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 44514 17923 IPAALPVAA True PC9_epitope_Rep5 821.50108938749 821.49998993586 73.958 2 0.00824196815112563 0.008634326390719748 0.9438714419765777 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.L269Pfs*11|1|0.15|ENSG00000145715|chr5:87332616-87332620|TTACT/-|frameshift_variant', 'RASA1|p.N407Sfs*3|1|0.22|ENSG00000145715|chr5:87349329-87349332|CAAT/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1', 'RASA1|p.L146Sfs*24|1|0.5|ENSG00000145715|chr5:87268885-87268897|CTTTGGGGGCGGG/-|frameshift_variant'] 101588 11766 SPEKFQIEA True PC9_epitope_Rep5 1047.5236753068698 1047.52256993586 50.255 2 0.008229564853306422 0.008634326390719748 0.9438714419765777 ['ENSG00000113194|ENST00000261942|FAF2'] 26953 19199 FLIQHLPLV True PC9_epitope_Rep6 1078.65390163078 1078.6528099358602 86.502 2 0.00822815756370882 0.008634326390719748 0.9438714419765777 ['ENST00000430069.5_1_3:176771676-176782752:-|nuORF', 'ENST00000424913.5_1_3:176771673-176816307:-|nuORF'] 62245 19117 LLQDFFNGK True PC9_epitope_Rep2 1080.5603951687601 1080.55928993586 78.904 2 0.008218054367681972 0.008634326390719748 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 102719 11604 SQDSTAVAL True PC9_epitope_Rep5 890.4345259492999 890.43397496793 49.632 1 0.008217471182561534 0.008634326390719748 0.9438714419765777 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 109209 12121 TFTFSHATF True NCI_RA007_Epitope_Rep5 1057.4868958753298 1057.48578993586 53.278 2 0.008166432770561113 0.008634326390719748 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 103018 20869 SQIYPVVCV True PC9_epitope_Rep5 1006.5157534754599 1006.5151749679301 85.324 1 0.00814845416602447 0.008634326390719748 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 91 9478 AAAPVVAAA True PC9_epitope_Rep1 739.4228390667898 739.42229496793 41.315 1 0.008131895497265246 0.008634326390719748 0.9438714419765777 ['ENST00000563328.4_1_16:72822270-72822732:+|nuORF'] 38470 14275 HGYLGIVEL True NCI_RA007_Epitope_Rep4 999.5389314481899 999.53782993586 62.202 2 0.008113087614834555 0.008634326390719748 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555371.1_1_14:35871898-35872434:-|nuORF'] 44230 20504 ILSSNIISV True PC9_epitope_Rep1 944.55424715916 944.55314993586 83.682 2 0.008086179713398506 0.008634326390719748 0.9438714419765777 ['nc|ENSG00000204385|Q53GD3-3|SLC44A4', 'nc|ENSG00000204385|Q53GD3-4|SLC44A4', 'ENSG00000204385|ENST00000229729|SLC44A4', 'SLC44A4|p.N144Kfs*55|1|0.1|ENSG00000204385|chr6:31874757-31874758|-/T|frameshift_variant', 'SLC44A4|p.L257Wfs*5|1|0.35|ENSG00000204385|chr6:31870980-31870980|G/-|frameshift_variant'] 99061 12192 SKVSILESL True NCI_RA007_Epitope_Rep5 974.56481184286 974.56370993586 53.551 2 0.008081025130611425 0.008634326390719748 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENSG00000188191|ENST00000537384|PRKAR1B'] 137008 6165 YKKRLSVEL True NCI_RA007_Epitope_Rep4 1134.67609362734 1134.6749899358601 30.324 2 0.008069763524305664 0.008634326390719748 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 28069 14569 FRDNSTVL True PC9_epitope_Rep1 950.48214484806 950.48104993586 60.864 2 0.008069683614924092 0.008634326390719748 0.9438714419765777 ['nc|ENSG00000198298|Q8NCK3-2|ZNF485', 'ENSG00000198298|ENST00000361807|ZNF485', 'ZNF485|p.C135Ffs*13|1|0.19|ENSG00000198298|chr10:43616447-43616447|G/TT|frameshift_variant'] 75137 13791 NNALGDLVLY True H1975_Epitope_Rep3 1090.56587447202 1090.56476993586 58.35 2 0.008065928966894384 0.008634326390719748 0.9438714419765777 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.A1065Pfs*28|1|0.5|ENSG00000105429|chr19:42352298-42352298|T/-|frameshift_variant'] 140897 21087 YYVGGEIVTI True PC9_epitope_Rep2 1112.57537652656 1112.5748749679299 86.568 1 0.008063742652622528 0.008634326390719748 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 124920 17036 VLLTGLHAV True PC9_epitope_Rep1 921.5647522732099 921.56364993586 70.353 2 0.008062176295105208 0.008634326390719748 0.9438714419765777 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3', 'ENST00000477675.1_1_22:22055420-22058252:-|nuORF', 'ENSG00000175155|ENST00000312655|YPEL2', 'ENSG00000100027|ENST00000339468|YPEL1'] 73568 13675 NFTNVAATF True NCI_RA007_Epitope_Rep4 983.4712458111899 983.47014993586 59.823 2 0.00804676180782793 0.008649835345773875 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 28676 12555 FSSSAGPGL True PC9_epitope_Rep5 821.3919328613299 821.39082993586 53.292 2 0.008027417885359135 0.008649835345773875 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 53934 4627 KYISKPENL True NCI_RA007_Epitope_Rep5 1090.60225998074 1090.60116993586 24.474 2 0.00800994961970271 0.008649835345773875 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 106541 12182 SVVTGGVQSV True PC9_epitope_Rep1 931.49746055903 931.49691496793 51.716 1 0.008007164690477108 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 22007 12127 ESPINVTTV True PC9_epitope_Rep6 958.49712620586 958.49602993586 57.99 2 0.007999854390848242 0.008649835345773875 0.9438714419765777 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 98501 19830 SILETVTAV True PC9_epitope_Rep4 931.52261267771 931.52150993586 84.404 2 0.007997284874340682 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 313 18058 AAIDWFDGK True PC9_epitope_Rep4 1021.4868958753299 1021.48578993586 77.522 2 0.007988561612727181 0.008649835345773875 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 31440 9111 GEDPTSVAIA True H1975_Epitope_Rep2 958.46074069714 958.4601949679301 39.998 1 0.007972547134539484 0.008649835345773875 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 17547 15771 EHIPNSPFHVL True PC9_epitope_Rep4 1288.65642081192 1288.65478490379 68.587 3 0.007958057304737776 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 24397 20105 FAFESDLHSL True PC9_epitope_Rep2 1164.54513902744 1164.5440499358601 82.742 2 0.007935111865492383 0.008649835345773875 0.9438714419765777 ['ENST00000488829.1_1_9:89626569-89628063:+|nuORF', 'ENSG00000117399|ENST00000310955|CDC20'] 87323 17810 QTAEEFYTV True PC9_epitope_Rep2 1086.48695544498 1086.4858499358602 73.799 2 0.00793302411152 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 87916 18593 QVPAAFAGL True PC9_epitope_Rep6 872.4756029156398 872.4745099358599 84.16 2 0.00788272614430209 0.008649835345773875 0.9438714419765777 ['ENSG00000132965|ENST00000380490|ALOX5AP'] 6 5158 AAAAAAAAAAA True PC9_epitope_Rep4 799.41881631551 799.41770993586 26.526 2 0.007879578351287164 0.008649835345773875 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 1268 7850 AEDPSQLP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 35.173 1 0.007876765957779008 0.008649835345773875 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 129056 9974 VTANTMENV True PC9_epitope_Rep2 977.44879611445 977.44768993586 43.694 2 0.007867966114826888 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 72502 15604 MVAPAVASV True PC9_epitope_Rep5 843.4524249429099 843.45187496793 65.032 1 0.007839191086514392 0.008649835345773875 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 140005 21614 YVLDDLIVA True PC9_epitope_Rep4 1019.5539128059899 1019.55280993586 91.329 2 0.007825823946133 0.008649835345773875 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 136204 20459 YGLPVVVKL True PC9_epitope_Rep5 986.6164534929 986.6159049679301 83.734 1 0.007792568179820947 0.008649835345773875 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1'] 44875 5994 IQDADRVI True NCI_RA007_Epitope_Rep2 928.4977949122 928.49668993586 27.925 2 0.00778104706511283 0.008649835345773875 0.9438714419765777 ['ENSG00000167880|ENST00000301607|EVPL', 'EVPL|p.L696Efs*65|1|0.15|ENSG00000167880|chr17:76015052-76015053|GC/-|frameshift_variant'] 56984 7801 LEEDHACIP True H1975_Epitope_Rep2 1025.4487961144498 1025.4476899358601 34.953 2 0.007770815856212607 0.008649835345773875 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 39584 11947 HPKYSDMIVA True PC9_epitope_Rep1 1159.56957995347 1159.56848993586 50.82 2 0.007766162495507139 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 85558 8380 QLLGSAHEV True PC9_epitope_Rep4 952.4977949122001 952.49668993586 39.692 2 0.00776536015674678 0.008649835345773875 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 86001 21913 QPILLELEA True PC9_epitope_Rep5 1024.580461907 1024.57936993586 89.328 2 0.0077601761228541875 0.008649835345773875 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 131604 14866 VVYGGGAAEI True PC9_epitope_Rep1 934.4759968384599 934.47544496793 62.001 1 0.00772192146924708 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 118978 9402 VEFDSVQSA True H1975_Epitope_Rep2 980.445090633 980.44398993586 41.129 2 0.007715663910992911 0.008649835345773875 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 132486 7622 VYPEKLATKF True NCI_RA007_Epitope_Rep3 1194.6648602372995 1194.66322490379 37.109 3 0.0077123702961653575 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 31483 12609 GEELSPPLP True H1975_Epitope_Rep3 937.4756624852898 937.47511496793 53.705 1 0.007692402105377629 0.008649835345773875 0.9438714419765777 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 71057 5190 M[Oxidation]ETAAAVAA True H1975_Epitope_Rep1 849.3902189896098 849.38966496793 25.026 1 0.007681986681006102 0.008649835345773875 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 101926 15372 SPLNSPLSSA True PC9_epitope_Rep1 971.49237517859 971.49126993586 63.946 2 0.007681292270443582 0.008649835345773875 0.9438714419765777 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 63773 13910 LPSDIAAEA True PC9_epitope_Rep2 885.4443623570099 885.44381496793 58.784 1 0.00766261858308042 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 31552 9893 GEFQSFSSA True NCI_RA007_Epitope_Rep3 958.4032258210199 958.40212993586 45.993 2 0.007638366826595399 0.008649835345773875 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 88079 13502 QVVGKLIEV True PC9_epitope_Rep6 983.6015317047498 983.60042993586 63.645 2 0.007608310264028337 0.008649835345773875 0.9438714419765777 ['nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 136392 13257 YHEDIHTYL True PC9_epitope_Rep3 1189.54038800017 1189.53874490379 56.025 3 0.007608040772346284 0.008649835345773875 0.9438714419765777 ['ENSG00000145386|ENST00000274026|CCNA2'] 22727 10411 ETYNGHLVSC True PC9_epitope_Rep1 1121.48115887189 1121.48006993586 44.93 2 0.007591765575990821 0.008649835345773875 0.9438714419765777 ['ENSG00000130520|ENST00000593829|LSM4', 'ENST00000593564.2_1_19:18423080-18433830:-|nuORF'] 118088 9683 VATVSLPR True PC9_epitope_Rep1 841.5021520166499 841.50104993586 42.102 2 0.007581606223567565 0.0086702664735063 0.9438714419765777 ['CON__P00761'] 110177 15651 TIDNFTHGL True PC9_epitope_Rep5 1016.49270953176 1016.49160993586 65.213 2 0.007580145661438813 0.0086702664735063 0.9438714419765777 ['nc|ENSG00000165915|Q96H72-2|SLC39A13', 'ENSG00000165915|ENST00000362021|SLC39A13'] 89403 4647 REMPVKVEA True NCI_RA007_Epitope_Rep3 1057.5590152697698 1057.5579099358602 25.202 2 0.007547877449500759 0.0086702664735063 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 31342 13224 GEALDALRPW True H1975_Epitope_Rep1 1126.5771078620598 1126.5760099358602 55.964 2 0.007520893105840417 0.0086702664735063 0.9438714419765777 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 39699 7672 HPTWALKEA True PC9_epitope_Rep4 1051.5450794577898 1051.54398993586 36.891 2 0.007518607588017543 0.0086702664735063 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 96435 10312 SEIIESVPP True H1975_Epitope_Rep1 969.5018772331299 969.50132496793 44.611 1 0.007518455911238459 0.0086702664735063 0.9438714419765777 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000112200|Q9Y4E5-4|ZNF451', 'ENST00000444273.6_1_6:56954967-57015704:+|nuORF', 'nc|ENSG00000112200|Q9Y4E5-2|ZNF451', 'ENSG00000112200|ENST00000370706|ZNF451'] 40087 9687 HRDERVLSL True PC9_epitope_Rep1 1123.60980497267 1123.60816490379 42.117 3 0.00751228550841342 0.0086702664735063 0.9438714419765777 ['ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 68910 11815 LVEVQLLESK True NCI_RA007_Epitope_Rep1 1156.6703395405598 1156.66924993586 49.937 2 0.007502712669308396 0.0086702664735063 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 112662 4763 TPFQGQGHGA True PC9_epitope_Rep1 998.4569927293797 998.45588993586 23.187 2 0.007432716167111478 0.008689546212586677 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 87965 12433 QVRDVIIAA True PC9_epitope_Rep3 983.5763795860698 983.57528993586 52.849 2 0.00741360523462482 0.008689546212586677 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 96618 4290 SEMRAPPAA True NCI_RA007_Epitope_Rep4 928.4436511643598 928.44254993586 22.835 2 0.007412939415227224 0.008689546212586677 0.9438714419765777 ['nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000108312|ENST00000436088|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF', 'UBTF|p.K594Rfs*63|1|0.17|ENSG00000108312|chr17:44209476-44209476|T/-|frameshift_variant'] 9035 16186 AVIGDVIRV True PC9_epitope_Rep6 940.57056592964 940.56946993586 74.615 2 0.007408684922801229 0.008689546212586677 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 117995 9374 VASGSAVVL True H1975_Epitope_Rep3 801.45961849833 801.4590749679301 41.057 1 0.00740780847705241 0.008689546212586677 0.9438714419765777 ['nc|ENSG00000165949|P40305-1|IFI27', 'ENSG00000165949|ENST00000612813|IFI27'] 88883 5147 REAHPPISV True H1975_Epitope_Rep3 1004.5403284305199 1004.53922993586 24.902 2 0.007401505588895241 0.008689546212586677 0.9438714419765777 ['ENST00000466317.1_1_17:17124695-17126113:-|nuORF', 'nc|ENSG00000154803|Q8NFG4-2|FLCN'] 118096 9888 VATVSLPR True PC9_epitope_Rep3 841.5021520166499 841.50104993586 42.991 2 0.0073960361097461244 0.008689546212586677 0.9438714419765777 ['CON__P00761'] 119131 7639 VEILANDQGNR True PC9_epitope_Rep3 1227.6207635791898 1227.6191249037902 34.382 3 0.007374764355419124 0.008689546212586677 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 72178 9898 MRPRKAFLL True PC9_epitope_Rep2 1130.6746541587 1130.6730149037899 43.404 3 0.007361765614951926 0.008689546212586677 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 53497 7414 KVLGAFSD True NCI_RA007_Epitope_Rep3 835.44396843419 835.44286993586 36.287 2 0.007352904456361973 0.008689546212586677 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66N|1|0.32|ENSG00000223609|chr11:5234108-5234108|C/A|missense_variant'] 7881 4792 ATAPPGVLK True NCI_RA007_Epitope_Rep3 852.50690304392 852.50580993586 25.816 2 0.007327135476519587 0.008689546212586677 0.9438714419765777 ['ENSG00000105538|ENST00000222145|RASIP1'] 72331 15546 MTDGFQFEY True H1975_Epitope_Rep2 1136.44846176128 1136.44736993586 64.953 2 0.007316595891676638 0.008689546212586677 0.9438714419765777 ['ENSG00000108821|ENST00000225964|COL1A1'] 34768 22088 GQSELTLLL True PC9_epitope_Rep2 972.54916177872 972.54861496793 90.434 1 0.0072904628837400275 0.008689546212586677 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 5921 12203 APHPPLSVV True PC9_epitope_Rep2 915.51780208079 915.51670993586 52.25 2 0.007274515770950452 0.008689546212586677 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 29001 20410 FTIGEAITSA True PC9_epitope_Rep2 1008.5127762699999 1008.51166993586 83.932 2 0.007254539346516408 0.008710724942952431 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 64094 11386 LQEDPPAGV True PC9_epitope_Rep5 924.4552613938798 924.45416993586 48.794 2 0.007218362362914325 0.008710724942952431 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 25413 7649 FEKIEEVSA True H1975_Epitope_Rep3 1050.5233409537 1050.5222499358601 34.403 2 0.007173710598747299 0.008710724942952431 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 113296 15243 TQIDHYVGI True PC9_epitope_Rep3 1044.52400966004 1044.52290993586 63.78 2 0.0071415343624332776 0.008710724942952431 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 77419 20528 NYMPGQLTI True PC9_epitope_Rep3 1035.5059170677498 1035.50537496793 84.223 1 0.007099504709895683 0.008731899956121105 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 119661 8314 VESPESLAA True H1975_Epitope_Rep1 901.4392769765699 901.43872496793 36.911 1 0.0070960411487191516 0.008731899956121105 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 29579 18287 FVIRNIVEA True PC9_epitope_Rep5 1059.6076797143498 1059.60658993586 75.355 2 0.007082159589233287 0.008731899956121105 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 84068 9019 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 39.686 2 0.007081741568267902 0.008731899956121105 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 103852 5696 SRKESYSVY True PC9_epitope_Rep1 1117.5403880001697 1117.53928993586 26.731 2 0.007044603046192076 0.008751919280543979 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENST00000609585.1_1_1:149399050-149399179:-|nuORF', 'ENST00000412169.1_1_1:120906105-120906168:+|nuORF'] 45971 5632 ISSSSFSR True PC9_epitope_Rep1 869.42429561877 869.42318993586 26.49 2 0.00698408630833177 0.008751919280543979 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF'] 2741 6285 AEVAAAVSA True H1975_Epitope_Rep2 787.4075829254699 787.40703496793 29.118 1 0.006982657608639413 0.008751919280543979 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 28333 16217 FSALPSLEEY True H1975_Epitope_Rep2 1154.54955570154 1154.54897496793 67.588 1 0.006972372557626751 0.008751919280543979 0.9438714419765777 ['KLF6|p.W32Cfs*6|1|0.35|ENSG00000067082|chr10:3784918-3784919|GC/A|frameshift_variant', 'ENST00000380946.3_1_10:3825413-3827293:-|nuORF', 'nc|ENSG00000067082|Q99612-3|KLF6', 'nc|ENSG00000067082|Q99612-2|KLF6', 'ENSG00000067082|ENST00000497571|KLF6'] 91869 6929 RPNPPPVSV True PC9_epitope_Rep6 961.53451477409 961.53340993586 35.59 2 0.006968213622653935 0.008751919280543979 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 25511 7677 FEQEMATAA True H1975_Epitope_Rep3 996.4222470134398 996.42114993586 34.512 2 0.006965159817664996 0.008751919280543979 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 130410 11053 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 50.578 2 0.006951053537960285 0.008751919280543979 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 131891 10863 VYEDQVGKF True PC9_epitope_Rep4 1083.5236753068698 1083.52256993586 49.547 2 0.006942725014299111 0.008751919280543979 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 28699 18788 FSTTVIQNV True PC9_epitope_Rep1 1007.5287606873098 1007.52766993586 77.052 2 0.00691464060340667 0.008751919280543979 0.9438714419765777 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.T122Ifs*2|1|0.21|ENSG00000100554|chr14:67345856-67345859|CCAG/-|frameshift_variant'] 71878 7868 MPNGDHIVSA True PC9_epitope_Rep4 1039.47567956863 1039.4745899358602 37.686 2 0.006907436999761527 0.008751919280543979 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 10695 4302 CSQNQYHQYLK True NCI_RA007_Epitope_Rep1 1410.6350337443403 1410.6333749037901 20.845 3 0.006879126768194413 0.008769814299182215 0.9438714419765777 ['ENSG00000069206|ENST00000175238|ADAM7'] 106081 19232 SVMETFLLY True NCI_RA007_Epitope_Rep4 1101.5416338701298 1101.5405299358601 83.15 2 0.006862993235662208 0.008769814299182215 0.9438714419765777 ['MAP3K6|p.D642*|1|0.14|ENSG00000142733|chr1:27360835-27360836|-/A|frameshift_variant', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-2|MAP3K6'] 35538 18262 GTIGLIHAI True PC9_epitope_Rep3 893.53345214493 893.53234993586 75.453 2 0.00684600941121048 0.008769814299182215 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 137845 7932 YPIEHGIITN True H1975_Epitope_Rep1 1155.5924235730297 1155.5913299358601 35.46 2 0.0067810248884147455 0.008769814299182215 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 10808 21668 DAFLGSFLYEY True H1975_Epitope_Rep1 1323.60231955039 1323.60177496793 90.036 1 0.006744528157227304 0.008769814299182215 0.9438714419765777 ['CON__P02769'] 11820 19357 DHLSSLII True PC9_epitope_Rep3 896.49673228304 896.49562993586 79.679 2 0.006739850197112437 0.008769814299182215 0.9438714419765777 ['ENSG00000179299|ENST00000381782|NSUN7', 'nc|ENSG00000179299|Q8NE18-3|NSUN7', 'ENST00000473399.5_1_4:40752710-40776973:+|nuORF', 'nc|ENSG00000179299|Q8NE18-2|NSUN7'] 5672 22185 APALLLIPAA True PC9_epitope_Rep3 948.60080342876 948.59970993586 90.62 2 0.006737346287941053 0.008769814299182215 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 54273 7146 KYPNVFKKI True NCI_RA007_Epitope_Rep4 1135.67536535135 1135.67371490379 34.108 3 0.006724502890698228 0.008769814299182215 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 83834 12467 QEFRFLPPP True NCI_RA007_Epitope_Rep3 1129.5920296502097 1129.59092993586 56.262 2 0.006662398005436763 0.008769814299182215 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 46773 14401 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.45752993586 60.393 2 0.006629314629269632 0.008769814299182215 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 38792 7414 HHYSGNNIEL True PC9_epitope_Rep2 1182.5417849825 1182.54013490379 33.895 3 0.0066138129651684835 0.008769814299182215 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 75238 6753 NPKEFYHEV True PC9_epitope_Rep4 1161.54547338061 1161.54382490379 33.171 3 0.006599596280021368 0.008769814299182215 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 107551 15885 TADSYLLQL True NCI_RA007_Epitope_Rep3 1022.52842633414 1022.5273299358599 70.14 2 0.006582934302747428 0.008769814299182215 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-3|HCFC1'] 37850 4777 HDPSAVAV True PC9_epitope_Rep4 794.3922672145001 794.39116993586 24.947 2 0.006574602633605731 0.008769814299182215 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 80653 18412 PLPPPLPPP True PC9_epitope_Rep2 923.54803957991 923.54694993586 76.152 2 0.0065566848892204075 0.008769814299182215 0.9438714419765777 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 2664 7057 AETAAVTVAA True H1975_Epitope_Rep1 902.4709114580199 902.46980993586 32.177 2 0.006543884834637883 0.008769814299182215 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 57573 10567 LELEQTYQA True H1975_Epitope_Rep1 1093.52915461013 1093.52804993586 45.598 2 0.006542812152325846 0.008769814299182215 0.9438714419765777 ['ENSG00000176619|ENST00000325327|LMNB2'] 107245 11066 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 47.565 3 0.0065286567973364025 0.008769814299182215 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 13177 11364 DLTDYLM[Oxidation]K True H1975_Epitope_Rep1 1013.47394861357 1013.47337496793 48.689 1 0.0065222656743067695 0.008769814299182215 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 716 19645 AAVLSVPAV True PC9_epitope_Rep2 825.4960040070499 825.49490993586 80.949 2 0.006518611663705873 0.008769814299182215 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 99077 15669 SLADAINTEF True NCI_RA007_Epitope_Rep5 1079.51350454599 1079.5124099358602 66.987 2 0.006512588012006471 0.008769814299182215 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 5824 14000 APGALLLE True NCI_RA007_Epitope_Rep5 782.4538048419 782.4532549679301 60.536 1 0.006469397639694993 0.008812310929896094 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 90632 2597 RKKKREQEL True NCI_RA007_Epitope_Rep5 1213.7255034312495 1213.72384490379 14.707 3 0.006466353072633815 0.008812310929896094 0.9438714419765777 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1', 'BTN3A1|p.F281L|1|0.26|ENSG00000026950|chr6:26409660-26409660|C/G|missense_variant'] 35884 21410 GVAETLVLV True PC9_epitope_Rep5 899.5327834385898 899.53168993586 87.417 2 0.006454018922777949 0.008812310929896094 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 128381 4870 VSDSGAHVL True NCI_RA007_Epitope_Rep3 883.43994568291 883.43884993586 26.14 2 0.006450494251068814 0.008812310929896094 0.9438714419765777 ['ENSG00000064102|ENST00000261191|INTS13'] 48542 7065 KEGDFNNLTA True NCI_RA007_Epitope_Rep3 1107.51965255559 1107.5185499358602 34.906 2 0.006396761731873845 0.008812310929896094 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2'] 111334 23831 TLIEDILGV True PC9_epitope_Rep2 971.5539128059899 971.5533649679301 97.137 1 0.006394989756794368 0.008812310929896094 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 17608 14549 EHMATIEAL True PC9_epitope_Rep1 1013.4851816231699 1013.48408993586 60.787 2 0.006368549122598711 0.008812310929896094 0.9438714419765777 ['ENSG00000095906|ENST00000262302|NUBP2'] 117053 12818 TYQQVQQTL True PC9_epitope_Rep5 1107.55603806431 1107.5549499358601 54.314 2 0.006334132074001131 0.008832102391023253 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 65106 8515 LSDPAAGAY True H1975_Epitope_Rep3 863.40249754503 863.40194496793 37.738 1 0.006326846430682129 0.008832102391023253 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000557589.1_1_12:56815505-56817595:-|nuORF'] 51979 11800 KLAPPLVTL True NCI_RA007_Epitope_Rep3 950.6164534929001 950.61534993586 53.531 2 0.0062913167790302135 0.008832102391023253 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 31498 4072 GEEPPRPSP True H1975_Epitope_Rep2 964.4614094034799 964.46030993586 20.748 2 0.0062896751198917925 0.008832102391023253 0.9438714419765777 ['ENSG00000104626|ENST00000250263|ERI1'] 123167 11332 VHGPPVQL True PC9_epitope_Rep1 845.47593726881 845.47484993586 48.468 2 0.00628211026490758 0.008832102391023253 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 35540 16580 GTIGLIHAI True PC9_epitope_Rep4 893.53345214493 893.53234993586 71.752 2 0.00626788909899252 0.008832102391023253 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 91751 6692 RPKPIITSV True PC9_epitope_Rep2 1009.62841515893 1009.62730993586 31.149 2 0.00624559713005468 0.008832102391023253 0.9438714419765777 ['ENSG00000168802|ENST00000448552|CHTF8'] 62228 19604 LLPVRLPLA True PC9_epitope_Rep4 990.6589870112199 990.65788993586 83.531 2 0.006244470978736209 0.008832102391023253 0.9438714419765777 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 105111 18375 STLPDVTEV True PC9_epitope_Rep3 959.48114178855 959.4805949679301 75.889 1 0.006230529715680808 0.008832102391023253 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 30106 14692 FYPPKVELF True NCI_RA007_Epitope_Rep4 1138.60628273202 1138.6051899358602 63.929 2 0.006225796964164471 0.008832102391023253 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 96344 9506 SEFGKIYGP True NCI_RA007_Epitope_Rep5 996.4916469025998 996.49054993586 43.197 2 0.006221353863744323 0.008832102391023253 0.9438714419765777 ['ENSG00000082781|ENST00000296181|ITGB5'] 29408 21760 FVFPGELLL True H1975_Epitope_Rep2 1033.5848190114498 1033.58427496793 90.009 1 0.006165610695628781 0.008873989351212778 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 120596 11669 VGAGAPVYL True H1975_Epitope_Rep3 845.46470387877 845.4641549679301 50.021 1 0.006164011969995112 0.008873989351212778 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC8|p.E42Q|1|0.17|ENSG00000277075|chr6:26217098-26217098|G/C|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 39731 12378 HPWETVTTAA True PC9_epitope_Rep3 1111.52982331647 1111.5287299358602 52.641 2 0.006142878665028093 0.008873989351212778 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 47712 21489 IYPWVHVVI True PC9_epitope_Rep1 1124.6382515666398 1124.6371499358602 87.501 2 0.0061282254551454874 0.008873989351212778 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3'] 32788 9156 GIDSSSPEV True PC9_epitope_Rep4 889.4028914678499 889.40178993586 42.811 2 0.006123828825823056 0.008873989351212778 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant'] 72220 6033 MRVSDRQQL True PC9_epitope_Rep1 1131.5818759726699 1131.5802449037901 28.021 3 0.006114550281395405 0.008873989351212778 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 104079 5025 SRVDDAVAA True PC9_epitope_Rep5 902.4457593393399 902.44466993586 24.358 2 0.006110052689312873 0.008873989351212778 0.9438714419765777 ['ENSG00000244187|ENST00000290079|TMEM141', 'ENST00000465017.5_1_9:139685822-139687379:+|nuORF'] 31441 9299 GEDPTSVAIA True H1975_Epitope_Rep2 958.46074069714 958.4601949679301 40.727 1 0.00610637749574477 0.008873989351212778 0.9438714419765777 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 111004 11202 TLDGSLHAV True PC9_epitope_Rep5 911.4712458111901 911.47014993586 48.077 2 0.00610154395787637 0.008873989351212778 0.9438714419765777 ['ENST00000583028.1_1_17:62175367-62207458:-|nuORF', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENSG00000178607|ENST00000433197|ERN1'] 762 11948 AAVTSLFAK True PC9_epitope_Rep6 906.5174677276199 906.51636993586 57.208 2 0.006094101863178622 0.008873989351212778 0.9438714419765777 ['CON__Q3SX09'] 104117 8113 SRYEGKMETL True PC9_epitope_Rep3 1212.5808729131597 1212.57922490379 36.182 3 0.006070373659564355 0.008893367212827477 0.9438714419765777 ['ENSG00000110395|ENST00000264033|CBL'] 14042 17533 DSDFFTSYY True H1975_Epitope_Rep1 1143.43967089939 1143.4390749679299 72.939 1 0.006042906624075871 0.008893367212827477 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 8511 15694 ATVPGLLKV True PC9_epitope_Rep4 896.5695033004799 896.56840993586 68.292 2 0.006031593557190691 0.008893367212827477 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 115710 11188 TVLERVEGA True PC9_epitope_Rep1 972.5240096600398 972.52290993586 47.917 2 0.006026961920015256 0.008893367212827477 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 28508 13935 FSGPAITL True H1975_Epitope_Rep1 804.43815477776 804.43760496793 58.756 1 0.006025392526726128 0.008893367212827477 0.9438714419765777 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 70842 4617 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 22.861 2 0.006008246372004363 0.008893367212827477 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 54 11283 AAAGSPLSL True H1975_Epitope_Rep2 785.4283183700501 785.4277649679301 48.447 1 0.005993459947209702 0.008893367212827477 0.9438714419765777 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 71865 24280 MPLGLLWLG True PC9_epitope_Rep5 998.5623097450599 998.56176496793 98.41 1 0.0059814909954548036 0.008893367212827477 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant', 'ENST00000470902.5_1_9:130911720-130912803:+|nuORF', 'LCN2|p.A11V|1|0.84|ENSG00000148346|chr9:128149557-128149557|C/T|missense_variant'] 116917 13569 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47054993586 60.087 2 0.005976791580895572 0.008893367212827477 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 99115 20565 SLAGGIIGV True PC9_epitope_Rep3 785.46470387877 785.46360993586 84.369 2 0.005967366575658554 0.008893367212827477 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 130631 10688 VVAGVAAE True PC9_epitope_Rep3 714.39120458534 714.39065496793 46.057 1 0.005956383848930484 0.008893367212827477 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 47642 12541 IYPPKLHQF True PC9_epitope_Rep1 1141.62841515893 1141.62676490379 53.109 3 0.005945820471042682 0.008893367212827477 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 94841 9828 RYMNHMQSL True PC9_epitope_Rep3 1178.5324832521 1178.5308449037902 42.763 3 0.005925765149261416 0.008893367212827477 0.9438714419765777 ['ENSG00000166233|ENST00000379887|ARIH1'] 70101 14412 LYITEPKTI True PC9_epitope_Rep4 1076.61176203528 1076.6106699358602 63.345 2 0.005900702283090312 0.008912538869180572 0.9438714419765777 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000490165.5_1_X:152728086-152735946:-|nuORF', 'ENST00000464993.1_1_X:152722593-152735946:-|nuORF'] 41102 16473 HYMPPPYASL True PC9_epitope_Rep2 1174.5481162328997 1174.5470099358602 68.605 2 0.005898409744566221 0.008912538869180572 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 53501 17706 KVLNELTQL True PC9_epitope_Rep3 1056.6179100448799 1056.6168099358601 73.302 2 0.005890148149328916 0.008912538869180572 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 87339 8804 QTATTTMVY True H1975_Epitope_Rep2 1014.4691972058599 1014.46867496793 38.831 1 0.005877480702789644 0.008912538869180572 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1'] 40216 6624 HRGTGLVL True PC9_epitope_Rep2 851.49773534255 851.49662993586 30.89 2 0.005840052633198402 0.008912538869180572 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 138235 14101 YQTEIGQTL True PC9_epitope_Rep6 1051.51858992643 1051.51807496793 66.112 1 0.005815497041885941 0.008912538869180572 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 25978 18859 FGYPFRLNEA True PC9_epitope_Rep4 1212.5927579262 1212.5916699358602 80.627 2 0.00581345965706512 0.008912538869180572 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 1362 10561 AEEEAPWAA True H1975_Epitope_Rep2 972.4188758851598 972.4183249679301 45.645 1 0.0058084282512077595 0.008912538869180572 0.9438714419765777 ['ENSG00000100294|ENST00000290429|MCAT', 'MCAT|p.A94Cfs*9|1|0.33|ENSG00000100294|chr22:43143061-43143070|GCGGCGGGCG/-|frameshift_variant', 'nc|ENSG00000100294|Q8IVS2-2|MCAT'] 79279 7204 PGHLQEGFG True PC9_epitope_Rep4 940.4402800360799 940.43918993586 35.014 2 0.005795058252834219 0.008912538869180572 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 72754 10301 NADHTTLLL True NCI_RA007_Epitope_Rep4 996.52400966004 996.5234649679301 46.478 1 0.0057900166345755955 0.008912538869180572 0.9438714419765777 ['ENSG00000160695|ENST00000621676|VPS11', 'nc|ENSG00000160695|Q9H270|VPS11'] 96342 9169 SEFGKIYGP True NCI_RA007_Epitope_Rep3 996.4916469025998 996.49054993586 43.153 2 0.005760467312719494 0.008912538869180572 0.9438714419765777 ['ENSG00000082781|ENST00000296181|ITGB5'] 107251 10710 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59143490379 46.186 3 0.005759587114318753 0.008912538869180572 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 95643 12732 SAVPPGTSL True PC9_epitope_Rep1 827.43888305375 827.43778993586 53.848 2 0.005746692019395283 0.008912538869180572 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 77480 21427 NYPPQYLILKL True PC9_epitope_Rep1 1360.77547331544 1360.77436993586 87.257 2 0.005734209959929546 0.008912538869180572 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 25412 7682 FEKIEEVSA True H1975_Epitope_Rep2 1050.5233409537 1050.5222499358601 34.501 2 0.005699860348532781 0.008932480952797969 0.9438714419765777 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 117015 16504 TYQDIQNTI True PC9_epitope_Rep3 1094.52440358286 1094.5233099358602 68.619 2 0.005691948592761599 0.008932480952797969 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 108352 2995 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 15.809 2 0.005684283535442611 0.008932480952797969 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 80645 18615 PLPPLPPPP True PC9_epitope_Rep5 923.5480395799099 923.54694993586 76.629 2 0.005664406362064119 0.008932480952797969 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 35885 19354 GVAETLVLV True PC9_epitope_Rep6 899.5327834385898 899.53168993586 87.093 2 0.005659959322916691 0.008932480952797969 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 132657 4100 VYQNHVQHL True NCI_RA007_Epitope_Rep4 1136.57269118796 1136.5710449037902 22.047 3 0.005653886073796891 0.008932480952797969 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 113347 6341 TQKSLSLSPG True NCI_RA007_Epitope_Rep2 1016.5502244078799 1016.5496749679301 29.271 1 0.005628265909489323 0.008932480952797969 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 67024 20381 LTAPALALA True PC9_epitope_Rep1 839.5116540711899 839.51054993586 83.218 2 0.00562604697936808 0.008932480952797969 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 90743 9102 RKQMVIDVL True NCI_RA007_Epitope_Rep5 1100.6375999436398 1100.6365099358602 41.664 2 0.005616539368910608 0.008932480952797969 0.9438714419765777 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 2499 13047 AEQPYFIEA True H1975_Epitope_Rep2 1066.49712620586 1066.4960299358602 55.307 2 0.0055909921836202305 0.008932480952797969 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B'] 132890 13807 VYTSVVEEL True NCI_RA007_Epitope_Rep5 1037.5280919809697 1037.52757496793 59.783 1 0.0055805571417410545 0.008954178251636491 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 42595 5753 IESSSPEV True H1975_Epitope_Rep2 846.39707781142 846.39598993586 27.126 2 0.005543140182599464 0.008973909998248993 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2'] 101650 8629 SPFPGHVGA True PC9_epitope_Rep4 867.42390169595 867.42280993586 40.677 2 0.005526989045324465 0.008973909998248993 0.9438714419765777 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF', 'ENST00000437505.5_1_7:100465025-100465781:+|nuORF', 'ENST00000496260.1_1_7:100465025-100465611:+|nuORF', 'ENST00000417475.5_1_7:100465025-100465781:+|nuORF'] 128556 9266 VSHVLAAL True NCI_RA007_Epitope_Rep4 808.4806882960798 808.47958993586 42.493 2 0.005516356522835208 0.008973909998248993 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000486788.2_1_9:35704327-35706084:-|nuORF'] 78992 14589 PFLGAPAAT True PC9_epitope_Rep3 843.44905381463 843.44794993586 61.243 2 0.005511113888945916 0.008973909998248993 0.9438714419765777 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 126794 7442 VPSPVSNSA True PC9_epitope_Rep5 856.4290466460401 856.4279499358599 33.58 2 0.005508645710558592 0.008973909998248993 0.9438714419765777 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160507-49161165:-|nuORF'] 69705 17553 LVYQEPIPTA True PC9_epitope_Rep4 1129.60192562757 1129.60082993586 75.536 2 0.00543960824961016 0.008973909998248993 0.9438714419765777 ['ENSG00000106588|ENST00000223321|PSMA2', 'ENST00000433579.1_1_7:42952135-42964395:-|nuORF', 'ENST00000411875.1_1_7:42961455-42966220:-|nuORF'] 106326 6718 SVSDGIHSV True PC9_epitope_Rep2 899.4348603024702 899.43376993586 31.252 2 0.005404123351492437 0.008973909998248993 0.9438714419765777 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 28073 8295 FRDQNPEQL True PC9_epitope_Rep2 1145.5465360097699 1145.54542993586 37.269 2 0.005396798863180575 0.008973909998248993 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 75561 19132 NQMDGFDTL True PC9_epitope_Rep4 1039.4280606698699 1039.4269699358601 81.684 2 0.005369331544518677 0.008973909998248993 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 119482 10117 VEQFPGPPT True H1975_Epitope_Rep2 970.4759968384598 970.47488993586 43.911 2 0.005342057688254798 0.008973909998248993 0.9438714419765777 ['ENST00000464508.1_1_20:30135258-30136223:+|nuORF'] 60876 9040 LKPTPEGDL True PC9_epitope_Rep5 968.5178616504398 968.51676993586 39.717 2 0.005302265391572232 0.008973909998248993 0.9438714419765777 ['CON__P02754'] 95392 7731 SAINEVVTR True PC9_epitope_Rep2 987.53490869691 987.53380993586 35.112 2 0.00527894100406591 0.008993632245782184 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'nc|ENSG00000071082|P62899-3|RPL31', 'nc|ENSG00000071082|P62899-2|RPL31'] 116472 16107 TYAPVKSFL True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 69.893 2 0.0052403179514548814 0.008993632245782184 0.9438714419765777 ['ENSG00000157350|ENST00000342907|ST3GAL2'] 26141 12834 FHLSSQSSL True PC9_epitope_Rep3 1004.49270953176 1004.49160993586 54.385 2 0.005239189872101996 0.008993632245782184 0.9438714419765777 ['SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion', 'nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 29322 19454 FVDPVLNQL True PC9_epitope_Rep6 1043.56514619603 1043.56404993586 87.493 2 0.005222377244695352 0.008993632245782184 0.9438714419765777 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C'] 46769 13276 IVCDVPSASA True PC9_epitope_Rep4 960.45863252216 960.45752993586 58.962 2 0.0052216574359261235 0.008993632245782184 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 26821 10131 FLEGVGIR True H1975_Epitope_Rep3 889.5021520166499 889.50104993586 44.012 2 0.00521691153034058 0.008993632245782184 0.9438714419765777 ['ENSG00000101331|ENST00000452892|CCM2L'] 37742 11217 HAVGDIPGV True PC9_epitope_Rep2 863.45011644379 863.4495649679301 48.475 1 0.005190693893233295 0.008993632245782184 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 28873 13121 FTDTSLMY True H1975_Epitope_Rep3 976.42118438428 976.42063496793 55.715 1 0.005185485592052966 0.008993632245782184 0.9438714419765777 ['nc|ENSG00000177426|Q15583-4|TGIF1', 'ENSG00000177426|ENST00000343820|TGIF1', 'nc|ENSG00000177426|Q15583-3|TGIF1', 'nc|ENSG00000177426|Q15583|TGIF1'] 59336 21631 LGIYLAIGLL True PC9_epitope_Rep4 1044.65831830488 1044.6572299358602 91.396 2 0.005174914207444343 0.008993632245782184 0.9438714419765777 ['L1MB7_dup7884|chr6:109271511-109272669:-|1.663382698896682|0.075209377654616|4.47|479.0|78|3|anti-sense'] 130722 15327 VVDLPEENRE True H1975_Epitope_Rep2 1198.5829810881398 1198.58188993586 64.114 2 0.005168446708746793 0.008993632245782184 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'RAD21-EIF3H|4|fusion', 'RAD21-EIF3H|2|fusion'] 128914 16210 VSTLPAITLK True PC9_epitope_Rep2 1041.64339651673 1041.6422899358602 67.599 2 0.005161587947941927 0.008993632245782184 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 86097 13874 QPQLPYSQA True PC9_epitope_Rep5 1030.5083595959 1030.5072699358602 58.386 2 0.005149556364960375 0.009014528268860494 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 47714 20398 IYPWVHVVI True PC9_epitope_Rep4 1124.6382515666398 1124.6371499358602 86.608 2 0.005109092818679957 0.009014528268860494 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3'] 39381 12536 HLVGIDIFTGK True NCI_RA007_Epitope_Rep1 1198.6710082469 1198.66990993586 52.74 2 0.005075587861891531 0.009014528268860494 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1', 'ENSG00000163577|ENST00000295822|EIF5A2'] 62155 8143 LLPGELAK True NCI_RA007_Epitope_Rep2 839.5116540711899 839.51054993586 36.309 2 0.005042735464832522 0.009014528268860494 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC15|p.A111E|1|0.43|ENSG00000233822|chr6:27838993-27838993|C/A|missense_variant', 'ENST00000369385.5_1_1:149814898-149814982:+|nuORF', 'ENST00000436555.1_1_1:228651916-228652012:-|nuORF', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000196890|ENST00000693095|H2BC26', 'nc|ENSG00000285480|A0A2R8Y619|H2BK1', 'ENSG00000146047|ENST00000274764|H2BC1'] 109737 9869 THGPPVQL True PC9_epitope_Rep3 847.45520182423 847.45410993586 42.919 2 0.005018806173097271 0.009014528268860494 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 72240 15141 MRYVASYL True PC9_epitope_Rep4 1001.5004377644898 1001.49934993586 66.167 2 0.004963781272927897 0.009033245844269466 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000524867.1_1_11:810234-811767:+|nuORF'] 73191 9125 NEEMSGLPA True H1975_Epitope_Rep3 946.4065969492998 946.40604496793 40.089 1 0.004960178997088781 0.009033245844269466 0.9438714419765777 ['ENSG00000197601|ENST00000354817|FAR1'] 132625 10499 VYPTKTFPNL True NCI_RA007_Epitope_Rep3 1178.6335601090198 1178.6324699358602 48.359 2 0.004928059404013026 0.009033245844269466 0.9438714419765777 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 110479 19756 TIPNNLIGC True PC9_epitope_Rep5 943.47970231991 943.47860993586 81.036 2 0.00492157633464724 0.009033245844269466 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1'] 129374 16498 VTEEIFLEY True H1975_Epitope_Rep3 1141.55430672881 1141.5532099358602 68.952 2 0.004901581131999399 0.009033245844269466 0.9438714419765777 ['ENSG00000100418|ENST00000263256|DESI1', 'ENST00000463886.1_1_22:41998573-42000148:-|nuORF'] 88881 5136 REAHPPISV True H1975_Epitope_Rep2 1004.5403284305199 1004.53922993586 24.833 2 0.00490003690825554 0.009033245844269466 0.9438714419765777 ['ENST00000466317.1_1_17:17124695-17126113:-|nuORF', 'nc|ENSG00000154803|Q8NFG4-2|FLCN'] 35753 5132 GTVDPQELQK True NCI_RA007_Epitope_Rep3 1113.56660274801 1113.56550993586 27.181 2 0.004892515970334525 0.009033245844269466 0.9438714419765777 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000472930.6_1_7:87835795-87839460:-|nuORF'] 107247 8307 SYPRRFSTL True PC9_epitope_Rep4 1125.59309227937 1125.59143490379 39.41 3 0.004892172300558915 0.009033245844269466 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 54010 15393 KYLGQLHYL True PC9_epitope_Rep1 1133.62332977849 1133.62168490379 64.027 3 0.004884200967780667 0.009033245844269466 0.9438714419765777 ['ENSG00000076201|ENST00000265562|PTPN23'] 100448 23008 SLPEVLPIL True PC9_epitope_Rep2 979.5953836951498 979.59428993586 93.995 2 0.004883527692321947 0.009033245844269466 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 96980 14758 SEVILPVP True NCI_RA007_Epitope_Rep4 852.49566965388 852.4951249679301 64.222 1 0.004873491007301727 0.009033245844269466 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 86611 12976 QRDPNSPLYSV True PC9_epitope_Rep3 1274.62551460646 1274.62440993586 54.94 2 0.004870844486926924 0.009033245844269466 0.9438714419765777 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B', 'nc|ENSG00000260537|Q9UMR2-4|DDX19B', 'ENSG00000168872|ENST00000302243|DDX19A', 'ENST00000567012.5_1_16:70390007-70398968:+|nuORF', 'ENST00000566167.5_1_16:70380803-70394746:+|nuORF', 'ENST00000562509.5_1_16:70380771-70390776:+|nuORF', 'ENST00000570055.5_1_16:70328730-70353576:+|nuORF', 'ENST00000569244.6_1_16:70380819-70394746:+|nuORF'] 107233 10710 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59143490379 46.085 3 0.0048416196576521785 0.009033245844269466 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 97767 12817 SHGPIAVL True PC9_epitope_Rep1 792.4493881678001 792.44828993586 54.175 2 0.004820871176402403 0.009033245844269466 0.9438714419765777 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 87101 10563 QSERQLLLY True H1975_Epitope_Rep2 1148.61897267404 1148.6178699358602 45.652 2 0.004804803769942177 0.009033245844269466 0.9438714419765777 ['ENST00000575531.5_1_16:4407102-4412712:-|nuORF', 'ENST00000575714.5_1_16:4408319-4455566:-|nuORF', 'nc|ENSG00000262246|P57737-2|CORO7', 'nc|ENSG00000262246|P57737-4|CORO7', 'ENSG00000262246|ENST00000251166|CORO7', 'nc|ENSG00000262246|P57737-3|CORO7'] 6238 6229 APRGTGIVSA True PC9_epitope_Rep1 927.5137793295098 927.51268993586 28.773 2 0.004768509061884812 0.009033245844269466 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 2654 6465 AETAAVTVA True H1975_Epitope_Rep2 831.43379767331 831.43324496793 29.785 1 0.004735630209681807 0.009054325955734407 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 36448 19415 GVIPTLVKL True PC9_epitope_Rep4 938.6164534929 938.61534993586 82.791 2 0.0047178858325194195 0.009054325955734407 0.9438714419765777 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'ENST00000505378.5_1_4:99182716-99313239:+|nuORF', 'ENST00000507303.5_1_4:99182716-99313239:+|nuORF'] 39540 16247 HPFGFVAV True PC9_epitope_Rep6 872.4544735482399 872.45336993586 74.857 2 0.004706238442152698 0.009054325955734407 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 31812 9974 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43098993586 43.354 2 0.0046778160656554945 0.009054325955734407 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 5220 5548 ALQASALK True PC9_epitope_Rep1 800.47560291564 800.4745099358599 26.17 2 0.004624359933691448 0.009075402379286213 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 519 4339 AAPPAAAAAD True NCI_RA007_Epitope_Rep4 824.4028318981999 824.40172993586 23.033 2 0.004593785722118693 0.009075402379286213 0.9438714419765777 ['NOS1AP|p.E284Dfs*40|1|0.12|ENSG00000198929|chr1:162357046-162357047|AG/-|frameshift_variant'] 126289 8400 VPHQPFSQA True PC9_epitope_Rep1 1009.4981292653698 1009.49702993586 37.148 2 0.0045295876612061825 0.009075402379286213 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 114973 5743 TTISKVSQV True PC9_epitope_Rep2 961.5444107514498 961.54330993586 27.482 2 0.004481393614500677 0.009075402379286213 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 136009 21991 YFLKGVLVF True PC9_epitope_Rep1 1084.6321035570397 1084.6310099358602 89.409 2 0.0044671928667684305 0.009096077316657191 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1'] 41047 16380 HYILHNSFF True PC9_epitope_Rep4 1176.5716285587998 1176.56998490379 70.967 3 0.004461989869588015 0.009096077316657191 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 94218 8334 RWPKKSAEF True PC9_epitope_Rep5 1147.61382772395 1147.61218490379 36.998 3 0.004457288418008156 0.009096077316657191 0.9438714419765777 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 109541 6022 THAPATLEA True PC9_epitope_Rep1 909.45559574705 909.45448993586 27.977 2 0.004443985567784128 0.009096077316657191 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 36054 17273 GVDVTLPRV True PC9_epitope_Rep1 954.5498304850599 954.54872993586 71.258 2 0.004373679693467985 0.009096077316657191 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 120708 7126 VGARIYHTI True PC9_epitope_Rep4 1028.5767139392399 1028.57560993586 34.683 2 0.004355523632740764 0.009096077316657191 0.9438714419765777 ['ENSG00000008394|ENST00000396210|MGST1', 'ENST00000539708.5_1_12:16513351-16516972:+|nuORF'] 115061 17809 TTSDIDYAL True PC9_epitope_Rep2 997.46040634397 997.45985496793 73.795 1 0.004329575899679614 0.009117743522466382 0.9438714419765777 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 117314 15188 VAAGVLCEL True H1975_Epitope_Rep2 873.46298962661 873.4624449679301 63.577 1 0.004268136483378798 0.00913801018735107 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 107158 15926 SYNEHWNYL True PC9_epitope_Rep4 1224.5199869087598 1224.5188899358602 69.187 2 0.004245075843860489 0.00913801018735107 0.9438714419765777 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 57570 13037 LELDTNLPA True H1975_Epitope_Rep3 984.51277627 984.51222496793 55.386 1 0.004234139041876669 0.00913801018735107 0.9438714419765777 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 64536 8220 LRDEHNYTL True PC9_epitope_Rep5 1159.56218607391 1159.56108993586 36.557 2 0.004231357791921374 0.00913801018735107 0.9438714419765777 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 17192 16164 EHAGVISVL True PC9_epitope_Rep1 923.5076313199099 923.50652993586 66.989 2 0.004230365461067926 0.00913801018735107 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 126006 8984 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.49088993586 44.579 2 0.004209975999943982 0.00913801018735107 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 77037 13609 NVVNRLTSV True PC9_epitope_Rep3 1000.56654317836 1000.56544993586 57.411 2 0.004208403900363248 0.00913801018735107 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 135896 9741 YESSTASALVA True NCI_RA007_Epitope_Rep1 1097.52406922969 1097.52347496793 41.892 1 0.0042079992419380985 0.00913801018735107 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 9733 13888 AYKPGALTF True PC9_epitope_Rep4 966.5174677276199 966.51636993586 61.322 2 0.004159686709946924 0.009159270755913084 0.9438714419765777 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 2866 7534 AEYINEAAA True NCI_RA007_Epitope_Rep4 950.4345259492999 950.43342993586 35.625 2 0.004115300930297483 0.009159270755913084 0.9438714419765777 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 41786 19369 IDRINLVI True PC9_epitope_Rep2 954.5862159937799 954.58510993586 79.879 2 0.0040972678797948844 0.009159270755913084 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 95404 8608 SAIQSISHV True PC9_epitope_Rep6 940.4977949122 940.49668993586 42.923 2 0.0040783717352582795 0.009178722846278246 0.9438714419765777 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 86213 9554 QPVSGTQVV True PC9_epitope_Rep5 913.48689587533 913.48578993586 41.708 2 0.004077420161398948 0.009178722846278246 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 110033 8377 THVGPTPAI True PC9_epitope_Rep2 891.48141657207 891.48030993586 37.595 2 0.004071221023410178 0.009178722846278246 0.9438714419765777 ['ENSG00000157259|ENST00000287957|GATAD1'] 47448 19896 IYIPSYFDF True NCI_RA007_Epitope_Rep3 1163.55391280599 1163.55280993586 86.717 2 0.004058260848893791 0.009178722846278246 0.9438714419765777 ['ENSG00000117597|ENST00000491415|UTP25', 'ENST00000457820.1_2_1:210016778-210017042:+|nuORF'] 102654 22179 SQDGSFYFL True PC9_epitope_Rep2 1062.46582607758 1062.46472993586 90.798 2 0.00404323204703389 0.009178722846278246 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 116852 16424 TYNEPGSQVF True PC9_epitope_Rep1 1140.50875351872 1140.5076499358602 67.998 2 0.004001707912098029 0.009178722846278246 0.9438714419765777 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.W992Mfs*12|1|0.31|ENSG00000163939|chr3:52587502-52587503|-/T|frameshift_variant', 'PBRM1|p.P1361Hfs*23|1|0.28|ENSG00000163939|chr3:52563287-52563287|G/-|frameshift_variant'] 67025 20163 LTAPALALA True PC9_epitope_Rep2 839.5116540711899 839.51054993586 82.969 2 0.003982957505467805 0.009178722846278246 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 5922 12385 APHPPLSVV True PC9_epitope_Rep2 915.51780208079 915.51670993586 52.948 2 0.0039684820527212195 0.009178722846278246 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 7052 15945 AQVALVNEV True PC9_epitope_Rep4 941.51819600361 941.5176449679301 69.26 1 0.003967076007231797 0.009178722846278246 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 24578 20608 FALSGPLFL True H1975_Epitope_Rep2 963.5429541994699 963.54184993586 85.363 2 0.003963791665711197 0.009178722846278246 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 76902 19823 NVLDHFSEL True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 81.639 2 0.003946281942766453 0.009178722846278246 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH'] 109840 18709 THLLGVAL True PC9_epitope_Rep5 822.49633836022 822.49524993586 76.982 2 0.003924711063394262 0.009178722846278246 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 62189 15992 LLPNHSYVF True PC9_epitope_Rep4 1088.5654805492 1088.5643899358602 69.446 2 0.003915957354229264 0.009199772737205542 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 73512 9623 NFGEDMDDER True PC9_epitope_Rep5 1226.4509809424198 1226.44988993586 41.98 2 0.00391036736108438 0.009199772737205542 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 46869 13775 IVGPDGLVY True H1975_Epitope_Rep1 931.50148331031 931.5009349679301 58.128 1 0.003899455772210394 0.009199772737205542 0.9438714419765777 ['ENSG00000105202|ENST00000221801|FBL'] 424 17869 AALPNVYEV True PC9_epitope_Rep6 974.5072969667399 974.5067449679301 81.361 1 0.003884835020067708 0.009199772737205542 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 84290 8110 QEYSEFVKA True NCI_RA007_Epitope_Rep3 1099.5185899264297 1099.51748993586 39.005 2 0.003839333229581729 0.009220818948564436 0.9438714419765777 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 110879 21853 TLAETLVNL True PC9_epitope_Rep1 972.54916177872 972.54806993586 88.867 2 0.0038345083855139354 0.009220818948564436 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 112295 12913 TMAKESSIIGV True PC9_epitope_Rep2 1134.59546034814 1134.5943699358602 54.966 2 0.0038102284438879595 0.009220818948564436 0.9438714419765777 ['nc|ENSG00000116791|Q08257-2|CRYZ', 'nc|ENSG00000116791|Q08257-3|CRYZ', 'ENSG00000116791|ENST00000340866|CRYZ'] 95582 6431 SASGPLHSV True PC9_epitope_Rep5 853.4293809992101 853.42883496793 29.711 1 0.0037962427240875807 0.009220818948564436 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 64650 13219 LRHPNIVSL True PC9_epitope_Rep1 1047.61891310439 1047.6178099358601 55.71 2 0.0037559296269051227 0.009263912255019774 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1', 'nc|ENSG00000170312|P06493-2|CDK1', 'chr10:60785787-60791890|496|11.3|0.51|4.48|+|ENST00000373809|CDK1,CDK1', 'ENST00000475504.6_1_10:62539923-62545554:+|nuORF'] 87821 20039 QVIPQFQTV True PC9_epitope_Rep5 1058.5760452328998 1058.57547496793 82.133 1 0.0037557541445303088 0.009263912255019774 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 48727 6852 KENPYEDIP True H1975_Epitope_Rep1 1103.51350454599 1103.5124099358602 31.4 2 0.003742401650552259 0.009263912255019774 0.9438714419765777 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C', 'ENST00000481894.1_1_1:115138166-115167938:-|nuORF'] 116189 14175 TVTNAVVTV True PC9_epitope_Rep1 902.50729696674 902.50618993586 59.346 2 0.003723714682386846 0.009285355356011448 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 96617 4205 SEMRAPPAA True NCI_RA007_Epitope_Rep4 928.4436511643598 928.44254993586 22.484 2 0.0036901535066402257 0.009285355356011448 0.9438714419765777 ['nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000108312|ENST00000436088|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF', 'UBTF|p.K594Rfs*63|1|0.17|ENSG00000108312|chr17:44209476-44209476|T/-|frameshift_variant'] 42769 23718 IFGVIIDTF True PC9_epitope_Rep1 1023.56408356687 1023.56298993586 96.025 2 0.003640827317610095 0.009306796583138531 0.9438714419765777 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENST00000493491.5_1_3:4841632-4887906:+|nuORF', 'ENSG00000123104|ENST00000381340|ITPR2', 'ENSG00000096433|ENST00000605930|ITPR3'] 1776 10193 AEHPIVIVC True H1975_Epitope_Rep2 979.5160878286299 979.51498993586 44.212 2 0.0036326012957719 0.009306796583138531 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37', 'DHX37|p.E276K|1|0.23|ENSG00000150990|chr12:124977403-124977403|C/T|missense_variant'] 116935 17337 TYPENWRAF True PC9_epitope_Rep2 1182.5458077337798 1182.54470993586 71.941 2 0.003586184622858028 0.009328235936646641 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 47259 20507 IYEPNFIFF True NCI_RA007_Epitope_Rep3 1188.5855472874398 1188.5844499358602 89.341 2 0.0035770390527648894 0.009328235936646641 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 54943 6861 LAHAAFSAA True PC9_epitope_Rep2 857.43955176009 857.43844993586 31.794 2 0.0035589584459934554 0.009349877665152044 0.9438714419765777 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'MMGT1|p.E37Kfs*7|1|0.46|ENSG00000169446|chrX:135971082-135971082|T/-|frameshift_variant', 'ENSG00000169446|ENST00000305963|MMGT1'] 52662 6693 KQFEKQVEL True PC9_epitope_Rep4 1147.6237237013097 1147.62262993586 32.928 2 0.0035465174180516015 0.009371518448128974 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 108769 16299 TEPNSFLTI True NCI_RA007_Epitope_Rep5 1020.5127762699999 1020.51166993586 69.449 2 0.003478887088621101 0.00939315828563939 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 140650 15087 YYPEYKLLF True NCI_RA007_Epitope_Rep3 1234.62741209942 1234.62630993586 66.829 2 0.003442256943162292 0.009411302297143855 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 89334 7893 REMDSCPVV True H1975_Epitope_Rep3 1034.4525015958998 1034.45140993586 35.336 2 0.003436517106227475 0.009411302297143855 0.9438714419765777 ['ENSG00000119912|ENST00000265986|IDE', 'IDE|p.I437Vfs*24|2|0.19|ENSG00000119912|chr10:92506459-92506459|T/AC|frameshift_variant', 'ENST00000496903.5_1_10:94214203-94257457:-|nuORF', 'nc|ENSG00000119912|P14735-2|IDE'] 136455 17202 YHGLTVPL True PC9_epitope_Rep5 898.4912529797799 898.49014993586 71.187 2 0.0034347266438693857 0.009411302297143855 0.9438714419765777 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 117833 4219 VAPAPAVVK True NCI_RA007_Epitope_Rep5 850.5276384885 850.52654993586 22.767 2 0.003432171856821105 0.009411302297143855 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF'] 3387 12401 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep3 1043.58627587973 1043.5857749679299 52.889 1 0.0034016426469546984 0.009411302297143855 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 9136 19808 AVLTGLVEA True PC9_epitope_Rep5 871.5014833103099 871.50038993586 81.239 2 0.003379097402403636 0.009411302297143855 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 70329 21872 LYPLTNYTF True PC9_epitope_Rep2 1130.56481184286 1130.56427496793 89.605 1 0.0033606556624715396 0.009411302297143855 0.9438714419765777 ['ENST00000567110.1_1_16:56481699-56485159:-|nuORF', 'ENSG00000167005|ENST00000300291|NUDT21'] 103387 12823 SQVVQVVL True NCI_RA007_Epitope_Rep4 870.5174677276198 870.51636993586 56.406 2 0.003345350223782157 0.009411302297143855 0.9438714419765777 ['KPNA3|p.N437Kfs*8|1|0.2|ENSG00000102753|chr13:49705682-49705683|-/T|frameshift_variant', 'ENSG00000102753|ENST00000261667|KPNA3'] 83659 7166 QEAGSPPVV True H1975_Epitope_Rep2 882.4446967101799 882.44414496793 32.497 1 0.0033355406370916235 0.009411302297143855 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 39007 5246 HKFAGDKGYL True NCI_RA007_Epitope_Rep4 1134.5821932425 1134.58108993586 26.719 2 0.003261157897996732 0.009411302297143855 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10', 'ENST00000478574.5_1_1:151956596-151958706:-|nuORF', 'ENST00000478348.1_1_1:151957748-151958706:-|nuORF'] 5982 16508 APLAIPSAA True PC9_epitope_Rep5 809.46470387877 809.46360993586 68.496 2 0.0032563501572497235 0.009411302297143855 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 11941 14689 DHSPDSLPL True PC9_epitope_Rep3 979.46107505031 979.45996993586 61.638 2 0.0032505361249193752 0.009411302297143855 0.9438714419765777 ['ENSG00000165097|ENST00000650836|KDM1B', 'nc|ENSG00000165097|Q8NB78-2|KDM1B'] 70837 4168 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 21.135 2 0.0032417719233158826 0.009411302297143855 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 72010 19867 MQGPPLLTAA True PC9_epitope_Rep5 997.52665251233 997.52554993586 81.47 2 0.0032325926369308356 0.009411302297143855 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 106988 16703 SYLERHGLINF True PC9_epitope_Rep4 1347.6935345966297 1347.6924299358602 72.221 2 0.003224434991361822 0.009411302297143855 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 45159 19862 IRDNFVIVY True PC9_epitope_Rep1 1137.61824439805 1137.61767496793 81.216 1 0.003224261943974453 0.009411302297143855 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 111332 24125 TLIEDILGV True PC9_epitope_Rep1 971.5539128059899 971.5533649679301 97.61 1 0.003197914575407359 0.009411302297143855 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 8882 12790 AVFVRGVGV True PC9_epitope_Rep4 902.5337864980997 902.53268993586 57.06 2 0.0031974044772644927 0.009411302297143855 0.9438714419765777 ['ENST00000232458.9_1_3:172468581-172468611:+|nuORF'] 7038 8645 AQSKRGILTL True PC9_epitope_Rep2 1085.65569253593 1085.65458993586 38.619 2 0.0031913188196973407 0.009428197293758184 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000411655.1_1_10:70782635-70782722:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 36295 6053 GVGPVPARA True PC9_epitope_Rep1 822.47118624154 822.47008993586 28.096 2 0.003173610177604085 0.009428197293758184 0.9438714419765777 ['ENSG00000129636|ENST00000320640|ITFG1', 'ITFG1|p.H35Y|1|0.18|ENSG00000129636|chr16:47460943-47460943|G/A|missense_variant'] 138106 12020 YQGVNLYVK True PC9_epitope_Rep4 1082.5760452328998 1082.57494993586 54.035 2 0.0031703455497863633 0.009428197293758184 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'nc|ENSG00000101104|Q4VXU2-2|PABPC1L', 'nc|ENSG00000101104|Q4VXU2|PABPC1L', 'ENSG00000101104|ENST00000217073|PABPC1L', 'ENST00000490798.5_1_20:43550276-43564067:+|nuORF', 'ENST00000476056.5_1_20:43550276-43561823:+|nuORF'] 28187 12554 FRPLYTHEY True PC9_epitope_Rep3 1224.5927579261997 1224.59110490379 53.309 3 0.003129376495029987 0.009428197293758184 0.9438714419765777 ['ENSG00000008952|ENST00000337002|SEC62'] 84063 9141 QEQDSRLWSP True H1975_Epitope_Rep2 1244.5785644140399 1244.57797496793 40.112 1 0.00312434917761317 0.009428197293758184 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 13183 11547 DLTDYLM[Oxidation]K True H1975_Epitope_Rep3 1013.47394861357 1013.47337496793 49.543 1 0.003123763830874295 0.009428197293758184 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 6447 7157 APSPATAAATA True PC9_epitope_Rep5 927.4661604307499 927.46506993586 32.499 2 0.0031171857370894396 0.009428197293758184 0.9438714419765777 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 107664 10907 TAIRGAIIL True H1975_Epitope_Rep2 926.5913013742199 926.59020993586 46.985 2 0.003097529821208195 0.009428197293758184 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000438210.1_1_1:40428398-40429073:+|nuORF', 'ENST00000479476.1_1_18:68097766-68098228:+|nuORF', 'ENST00000527871.5_1_16:2012676-2013018:-|nuORF', 'ENST00000533161.5_1_16:2012676-2014626:-|nuORF'] 82359 6778 PTTLPTSTG True H1975_Epitope_Rep2 873.44436235701 873.44381496793 30.987 1 0.003095993145840657 0.009428197293758184 0.9438714419765777 ['ZNF544|p.L412Tfs*29|1|0.22|ENSG00000198131|chr19:58261839-58261840|-/A|frameshift_variant', 'ENSG00000198131|ENST00000687789|ZNF544'] 77178 20678 NYGDYFNVF True PC9_epitope_Rep6 1137.47672511445 1137.47562993586 92.298 2 0.0030906732933583627 0.009428197293758184 0.9438714419765777 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 6234 3996 APRGPGTVPA True PC9_epitope_Rep4 921.5032146458099 921.50210993586 21.604 2 0.0030830033851826488 0.009428197293758184 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 83172 12011 PYTKVEESF True PC9_epitope_Rep3 1098.5233409536997 1098.5222499358601 51.226 2 0.0030423442920040926 0.009428197293758184 0.9438714419765777 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 115711 9883 TVLERVEGA True PC9_epitope_Rep2 972.5240096600398 972.52290993586 43.348 2 0.003030406789493997 0.009428197293758184 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 16472 12209 EELSNVLAA True H1975_Epitope_Rep3 944.4814761417199 944.48036993586 52.134 2 0.0030120089483291266 0.009428197293758184 0.9438714419765777 ['ENSG00000130255|ENST00000347512|RPL36', 'ENST00000477971.3_1_4:76957905-76958040:-|nuORF', 'ENST00000306634.3_1_9:111389208-111389427:+|nuORF'] 33182 13212 GKVQIPIML True NCI_RA007_Epitope_Rep3 997.5994235297699 997.59832993586 59.24 2 0.003011274829521225 0.009428197293758184 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 83148 7198 PYSDSTAKL True PC9_epitope_Rep3 980.48147614172 980.48036993586 32.7 2 0.002966703312709173 0.009428197293758184 0.9438714419765777 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF', 'ENST00000602040.5_1_19:50354666-50357992:+|nuORF', 'PTOV1|p.M142Hfs*58|2|0.28|ENSG00000104960|chr19:49854860-49854861|-/A|frameshift_variant'] 117054 10868 TYQQVQQTL True PC9_epitope_Rep6 1107.55603806431 1107.5549499358601 52.664 2 0.002961361615144746 0.009428197293758184 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 127330 6118 VQNGKVIGV True PC9_epitope_Rep4 912.5392658013598 912.53816993586 30.544 2 0.002954371909239616 0.009428197293758184 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 140365 15528 YYEKLHTYF True PC9_epitope_Rep3 1262.5971746003 1262.5960699358602 64.879 2 0.0029472640579062317 0.009428197293758184 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 29740 19735 FVQDLLSTV True PC9_epitope_Rep6 1020.54916177872 1020.54806993586 88.568 2 0.002945237725993195 0.009428197293758184 0.9438714419765777 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 7193 15654 ARDETEFYL True PC9_epitope_Rep4 1142.5244035828598 1142.52387496793 68.14 1 0.0029361642256213226 0.009428197293758184 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 117414 10288 VADLVENSY True H1975_Epitope_Rep1 1008.4763907612801 1008.47528993586 44.517 2 0.0029075999773039126 0.009428197293758184 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000460826.1_1_2:242186148-242187441:-|nuORF', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 107079 17629 SYLTSASSL True PC9_epitope_Rep3 927.45492704071 927.45382993586 73.002 2 0.002900034616784354 0.009428197293758184 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 91522 9723 RPAAPLIGA True PC9_epitope_Rep2 864.51813643396 864.51702993586 42.74 2 0.002884306717372346 0.009428197293758184 0.9438714419765777 ['ENSG00000111276|ENST00000228872|CDKN1B'] 80639 18228 PLPPLPPPP True PC9_epitope_Rep2 923.5480395799099 923.54694993586 75.432 2 0.002873099943021346 0.00944899072558647 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 20824 14760 EQPETYYKW True PC9_epitope_Rep2 1242.5557037111398 1242.55460993586 62.039 2 0.0028720580265744677 0.00944899072558647 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1'] 132554 20442 VYPGYYLTF True PC9_epitope_Rep6 1121.54334812229 1121.5422499358601 91.347 2 0.0028641471826198433 0.00944899072558647 0.9438714419765777 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 101653 21063 SPFPLEAV True PC9_epitope_Rep1 858.44871946146 858.44762993586 85.85 2 0.0028504984170997054 0.00944899072558647 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 8940 13645 AVGPIVQL True H1975_Epitope_Rep1 795.48543932335 795.48489496793 57.618 1 0.0028430603348347065 0.00944899072558647 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.K134Rfs*14|1|0.17|ENSG00000112531|chr6:163478888-163478888|A/-|frameshift_variant'] 118943 13249 VEESALPSA True PC9_epitope_Rep5 901.4392769765699 901.43816993586 55.972 2 0.0028030463917493634 0.009466681208419675 0.9438714419765777 ['ENSG00000122299|ENST00000355758|ZC3H7A'] 13972 6283 DRNLQVSL True PC9_epitope_Rep4 943.50869394907 943.50758993586 31.225 2 0.002793081738287684 0.009466681208419675 0.9438714419765777 ['ENSG00000142959|ENST00000372207|BEST4', 'ENST00000524877.5_1_11:61726936-61727579:+|nuORF', 'nc|ENSG00000127325|Q8N1M1-1|BEST3', 'ENSG00000167995|ENST00000378043|BEST1', 'nc|ENSG00000127325|Q8N1M1-5|BEST3', 'nc|ENSG00000127325|Q8N1M1-6|BEST3', 'ENSG00000127325|ENST00000330891|BEST3', 'nc|ENSG00000167995|O76090-3|BEST1'] 29357 22356 FVEETVYLL True PC9_epitope_Rep5 1111.58012755383 1111.5795749679298 91.001 1 0.0027887448993702355 0.009466681208419675 0.9438714419765777 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 109769 13797 THISDTSVVL True PC9_epitope_Rep3 1070.56078909158 1070.5596899358602 58.148 2 0.002773056741457992 0.009466681208419675 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 8878 16566 AVFQEAAEV True PC9_epitope_Rep5 962.4709114580198 962.46980993586 68.725 2 0.00275214274940781 0.009466681208419675 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 7729 6710 [Acetylation]-ASSDIQVK True H1975_Epitope_Rep3 888.4552617101799 888.45416993586 30.765 2 0.0026958325449792974 0.009466681208419675 0.9438714419765777 ['ENST00000465604.1_1_1:26229981-26231212:-|nuORF', 'ENSG00000117632|ENST00000455785|STMN1', 'nc|ENSG00000117632|P16949-2|STMN1'] 106889 7285 SYIGGHEGL True NCI_RA007_Epitope_Rep5 931.43994568291 931.43884993586 34.698 2 0.0026838111010786423 0.009466681208419675 0.9438714419765777 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 87868 21750 QVLEELTEL True PC9_epitope_Rep5 1072.5652057656798 1072.5641099358602 88.69 2 0.0026759396457659086 0.009466681208419675 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1', 'ENSG00000131459|ENST00000253778|GFPT2'] 119986 17767 VFAGVFNTF True NCI_RA007_Epitope_Rep4 1000.50181766348 1000.50127496793 76.913 1 0.002674822889660404 0.009466681208419675 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 132955 18939 VYTWPSGNTF True PC9_epitope_Rep6 1170.53457434374 1170.53346993586 85.494 2 0.0026518796290773638 0.009466681208419675 0.9438714419765777 ['ENSG00000149596|ENST00000372980|JPH2', 'nc|ENSG00000149596|Q9BR39-2|JPH2'] 111523 21190 TLLRLLYEA True PC9_epitope_Rep3 1090.6386454894598 1090.63754993586 86.795 2 0.0026481810006435272 0.009466681208419675 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 130425 11444 VTVPPGPSL True NCI_RA007_Epitope_Rep5 865.49091862661 865.48982993586 50.668 2 0.0026420213425245496 0.009466681208419675 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 130463 16755 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.49037496793 69.453 1 0.0026078553942378 0.009466681208419675 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 1061 10060 AEAIRILAA True NCI_RA007_Epitope_Rep4 926.5549158654999 926.55380993586 45.541 2 0.0025806467756392826 0.009466681208419675 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 120451 19027 VFTYVGALF True NCI_RA007_Epitope_Rep4 1015.5378688190298 1015.5372749679301 82.308 1 0.002580296655110145 0.009466681208419675 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 81776 5658 PSEEREWDREK True H1975_Epitope_Rep3 1459.66917032359 1459.66753490379 26.793 3 0.0025802114533205844 0.009466681208419675 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 28510 14331 FSGPAITL True H1975_Epitope_Rep2 804.43815477776 804.43760496793 60.273 1 0.0025795700900392055 0.009466681208419675 0.9438714419765777 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B', 'ENST00000466379.1_1_1:10189503-10195243:+|nuORF'] 58097 12496 LERSNVVI True PC9_epitope_Rep4 928.5341804209199 928.53308993586 55.876 2 0.0025658270255437287 0.009466681208419675 0.9438714419765777 ['FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 77156 13990 NYENKQYLF True PC9_epitope_Rep4 1217.57168812845 1217.5705899358602 61.718 2 0.002563999186183413 0.009466681208419675 0.9438714419765777 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 11964 16036 DHTLGNII True PC9_epitope_Rep2 881.46068112749 881.45958993586 66.938 2 0.002554792120319401 0.009466681208419675 0.9438714419765777 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2', 'ENST00000504101.1_1_7:102210280-102212998:-|nuORF', 'nc|ENSG00000285437|Q9H1A7|POLR2J3', 'ENSG00000005075|ENST00000292614|POLR2J', 'ENST00000427076.5_1_7:44053248-44058742:-|nuORF', 'ENST00000422304.1_1_7:44027725-44058742:-|nuORF', 'ENST00000454572.1_1_7:44005962-44058742:-|nuORF', 'ENST00000326391.6_1_7:44054045-44058742:-|nuORF', 'ENSG00000168255|ENST00000513506|POLR2J3'] 47673 11913 IYPQVLHSL True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 52.481 2 0.0025321384158798997 0.009488286873445884 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 118616 3220 VEAPPPKVNP True H1975_Epitope_Rep2 1046.5760452329 1046.57494993586 16.948 2 0.002482557999920592 0.009507610449648917 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 6373 7641 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49492993586 34.338 2 0.002476119415359858 0.009507610449648917 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 29573 18411 FVIRNIVEA True PC9_epitope_Rep1 1059.6076797143498 1059.60658993586 75.608 2 0.002469256363773229 0.009507610449648917 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 31994 13123 GETIFVTAP True H1975_Epitope_Rep3 933.48074786573 933.47964993586 55.723 2 0.0024556822616107277 0.009507610449648917 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 127274 17647 VQLDPQTVGV True PC9_epitope_Rep4 1054.56587447202 1054.56476993586 75.903 2 0.002453280052973222 0.009507610449648917 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 35663 8354 GTMTGMLYK True NCI_RA007_Epitope_Rep5 1000.47217441132 1000.4716749679301 38.805 1 0.0024490144718004917 0.009507610449648917 0.9438714419765777 ['nc|ENSG00000204152|Q5SRD1-2|TIMM23B', 'ENSG00000204152|ENST00000651259|TIMM23B', 'ENSG00000178440|ENST00000651763|TIMM23B-AGAP6', 'ENSG00000265354|ENST00000580018|TIMM23'] 40223 9006 HRGTGLVL True PC9_epitope_Rep5 851.49773534255 851.49662993586 39.587 2 0.0024233157647198696 0.009507610449648917 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 5196 20767 ALPPVLTTV True PC9_epitope_Rep2 909.55351888317 909.55297496793 85.323 1 0.002420067470585219 0.009507610449648917 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1'] 72334 13098 MTDGGLGLY True H1975_Epitope_Rep2 925.42151873745 925.4209649679301 55.507 1 0.0024110911284252017 0.009507610449648917 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 105968 11540 SVLGQLGITK True NCI_RA007_Epitope_Rep5 1014.6073453611799 1014.60624993586 51.038 2 0.0023971551459579057 0.009507610449648917 0.9438714419765777 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1', 'nc|ENSG00000197249|P01009-2|SERPINA1'] 34839 8586 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 38.386 2 0.0023903823556567583 0.009507610449648917 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 74339 20611 NIPPYFVAL True PC9_epitope_Rep6 1032.56441792004 1032.56332993586 92.011 2 0.0023871234733583613 0.009507610449648917 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 25627 11105 FEVPSTPEA True H1975_Epitope_Rep2 975.4549270407099 975.4543749679301 47.75 1 0.0023688253785042416 0.00952837799533393 0.9438714419765777 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C'] 9636 15383 AYGGPVGAGI True PC9_epitope_Rep1 860.4392174069199 860.4386649679301 63.989 1 0.0023229893758595567 0.00952837799533393 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7'] 57591 10330 LELIGHAVA True H1975_Epitope_Rep2 921.52836676449 921.52726993586 44.743 2 0.002318183881044939 0.00952837799533393 0.9438714419765777 ['ENSG00000119922|ENST00000371826|IFIT2'] 40979 5984 HYAHLIKTF True NCI_RA007_Epitope_Rep3 1128.6080140675201 1128.60637490379 30.518 3 0.0022942352306770182 0.00952837799533393 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1', 'ENST00000495574.1_1_10:129046289-129055694:+|nuORF', 'ENST00000484400.5_1_10:129046280-129142589:+|nuORF'] 64056 13234 LQDPSAIKI True PC9_epitope_Rep4 983.5651461960299 983.56404993586 58.8 2 0.0022551593059764743 0.00952837799533393 0.9438714419765777 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 54260 17418 KYPHYFPVM True PC9_epitope_Rep5 1180.57393705792 1180.5722849037902 71.999 3 0.0022396124423573593 0.009545603138280484 0.9438714419765777 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 2655 6374 AETAAVTVA True H1975_Epitope_Rep2 831.43379767331 831.43270993586 29.444 2 0.0022219093852822143 0.009545603138280484 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 1530 3995 AEERIEGRVAA True H1975_Epitope_Rep2 1199.62584895963 1199.62420490379 20.436 3 0.002210006439246862 0.009545603138280484 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000380393.7_1_20:2844875-2903853:+|nuORF'] 52525 5214 KPPPPPPPP True PC9_epitope_Rep3 922.5276384884999 922.52654993586 25.137 2 0.0022006350065570724 0.009545603138280484 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 64059 16280 LQDQNTYTL True PC9_epitope_Rep1 1094.52440358286 1094.5233099358602 67.44 2 0.002185832955354484 0.009545603138280484 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 35486 6328 GTFGGLGSK True NCI_RA007_Epitope_Rep2 822.42356734278 822.42246993586 29.221 2 0.0021613550839128313 0.009545603138280484 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 21716 14138 ERYPYPVRL True PC9_epitope_Rep5 1191.6400424717897 1191.63838490379 59.393 3 0.0021458023998834294 0.009545603138280484 0.9438714419765777 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 29029 22603 FTLGDIAQL True PC9_epitope_Rep2 976.5229470308798 976.52184993586 92.443 2 0.0021356575394259705 0.009545603138280484 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 95456 20533 SALPFITYL True H1975_Epitope_Rep2 1023.5640835668698 1023.5635749679301 85.067 1 0.002116432780525112 0.009545603138280484 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 46494 19972 ITPENLPQI True PC9_epitope_Rep5 1023.5600608155898 1023.55947496793 81.874 1 0.0021138882987026156 0.009545603138280484 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 42084 6112 IEEIHSVSA True H1975_Epitope_Rep2 983.49237517859 983.49126993586 28.489 2 0.0021138215364203965 0.009545603138280484 0.9438714419765777 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 42580 7500 IESRTLAIA True H1975_Epitope_Rep2 972.5603951687599 972.55928993586 33.799 2 0.0021113802219453175 0.009545603138280484 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 5923 12087 APHPPLSVV True PC9_epitope_Rep2 915.51780208079 915.51670993586 51.801 2 0.0021045657544147616 0.009545603138280484 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 135099 14692 YALYDATYETK True PC9_epitope_Rep3 1336.61869789052 1336.6176099358602 61.649 2 0.0021033876762764758 0.009545603138280484 0.9438714419765777 ['ENSG00000172757|ENST00000308162|CFL1', 'ENST00000530945.1_1_11:65623404-65625570:-|nuORF', 'ENST00000508046.1_1_5:68609355-68609532:-|nuORF', 'nc|ENSG00000165410|Q9Y281-3|CFL2', 'ENSG00000165410|ENST00000298159|CFL2'] 95818 11725 SDGVAVLKV True PC9_epitope_Rep1 886.5123823471799 886.5118349679301 49.975 1 0.0020764456035514945 0.009545603138280484 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 101631 16972 SPFGTITSA True PC9_epitope_Rep3 879.43379767331 879.43270993586 70.443 2 0.002067196197528633 0.009545603138280484 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 9453 6570 AVVVVDDR True PC9_epitope_Rep1 871.4763311916298 871.4752299358599 30.076 2 0.0020665887782533323 0.009545603138280484 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'PSPC1|p.E183Q|1|0.14|ENSG00000121390|chr13:19772369-19772369|C/G|missense_variant'] 36059 17057 GVDVTLPRV True PC9_epitope_Rep5 954.5498304850599 954.54872993586 70.628 2 0.00205377110866216 0.009545603138280484 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 46511 8701 ITPQTIHGV True PC9_epitope_Rep4 964.5341804209198 964.53308993586 40.963 2 0.0020482881235691247 0.009545603138280484 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 105664 10340 SVFSKYFER True NCI_RA007_Epitope_Rep5 1161.5818588893299 1161.58021490379 46.401 3 0.002043781361977809 0.009545603138280484 0.9438714419765777 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 129336 14448 VTDTGALYLY True H1975_Epitope_Rep2 1114.55464108198 1114.5540749679299 60.73 1 0.0020431171276108643 0.009545603138280484 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 101621 16966 SPFGSITSA True PC9_epitope_Rep3 865.4181476091701 865.4175949679301 70.421 1 0.002024601930791302 0.009545603138280484 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 102369 18551 SPVLPLTSA True PC9_epitope_Rep5 883.50148331031 883.50038993586 76.379 2 0.001991691680061135 0.009562811771625242 0.9438714419765777 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1'] 59733 5416 LGVIEDHSNR True PC9_epitope_Rep3 1138.5730851107799 1138.57144490379 25.905 3 0.00198473639476906 0.009562811771625242 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 48772 8043 KEQLPPLAA True H1975_Epitope_Rep3 965.5545815123298 965.55348993586 35.911 2 0.0019839221789367256 0.009562811771625242 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 107505 7236 TAAPPAQPL True NCI_RA007_Epitope_Rep5 864.4705175352 864.46942993586 34.511 2 0.001975061653839566 0.009562811771625242 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 21567 6417 ERSDVQIHV True PC9_epitope_Rep2 1081.5516213902101 1081.5505299358601 30.092 2 0.0019659726318489276 0.009562811771625242 0.9438714419765777 ['nc|ENSG00000180228|O75569-3|PRKRA', 'nc|ENSG00000180228|O75569-2|PRKRA', 'ENSG00000180228|ENST00000325748|PRKRA', 'ENST00000466165.1_1_2:179312230-179315757:-|nuORF', 'ENST00000463882.1_1_2:179314855-179315757:-|nuORF', 'ENST00000470200.5_1_2:179312233-179316155:-|nuORF', 'ENST00000460433.5_1_2:179312233-179315416:-|nuORF'] 9727 17001 AYIQVTHVI True PC9_epitope_Rep3 1042.58113061334 1042.58002993586 70.553 2 0.0019575825922586738 0.009562811771625242 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9'] 54980 20685 LAIGASFTV True PC9_epitope_Rep2 877.49091862661 877.49037496793 85.0 1 0.0019528854144370616 0.009562811771625242 0.9438714419765777 ['nc|ENSG00000104635|Q15043-2|SLC39A14', 'nc|ENSG00000104635|Q15043-3|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 91826 13941 RPNDIMAEV True PC9_epitope_Rep1 1043.50697969691 1043.50647496793 58.46 1 0.0019396507517131767 0.009562811771625242 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 113706 10983 TRDETNYGIP True PC9_epitope_Rep2 1164.5411162761598 1164.54000993586 47.568 2 0.0019369028073267461 0.009562811771625242 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 118151 11610 VAVGVIKAV True PC9_epitope_Rep4 854.5589386167799 854.55784993586 52.418 2 0.0019367001915258568 0.009562811771625242 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 84281 12737 QEYFGSLAA True NCI_RA007_Epitope_Rep5 984.4552613938797 984.45416993586 55.658 2 0.0019267378693192858 0.009562811771625242 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 66739 22123 LSTRLTLLL True PC9_epitope_Rep3 1028.65938093404 1028.65828993586 90.394 2 0.0019079113117886897 0.009562811771625242 0.9438714419765777 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 135017 11226 YAGSGNVL True PC9_epitope_Rep5 779.38136817763 779.38026993586 48.17 2 0.0018984752738563783 0.009562811771625242 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 8819 14441 AVFPSIVG True H1975_Epitope_Rep1 788.4432401582 788.44269496793 60.744 1 0.0018783755291592995 0.009562811771625242 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 46771 14199 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.45752993586 59.624 2 0.0018640446720961132 0.009562811771625242 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 136494 16061 YHISLEHEIL True PC9_epitope_Rep4 1252.64518742188 1252.6435349037902 69.713 3 0.0018576400269360654 0.009562811771625242 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant'] 9542 12205 AYAGSGNVL True PC9_epitope_Rep5 850.41848196234 850.41793496793 51.932 1 0.0018240290539443427 0.009562811771625242 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 39713 11822 HPVHPFLAV True PC9_epitope_Rep2 1015.56033559911 1015.55922993586 50.803 2 0.0018182520926389612 0.009562811771625242 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 17525 12672 EHINEGETAML True PC9_epitope_Rep5 1242.55505208814 1242.5539499358601 53.747 2 0.0018108059450744863 0.009562811771625242 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 116885 17513 TYNYPVHYF True PC9_epitope_Rep2 1202.53965972418 1202.53856993586 72.623 2 0.0018083546913248503 0.009562811771625242 0.9438714419765777 ['nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 41039 18997 HYILHNSFF True PC9_epitope_Rep1 1176.5716285587998 1176.56998490379 77.858 3 0.0017898338748359428 0.009562811771625242 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 15882 18215 EDPGQAYVL True PC9_epitope_Rep5 990.4658260775799 990.46472993586 75.076 2 0.0017879655154066354 0.009562811771625242 0.9438714419765777 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13'] 138975 20082 YSETLLSYFY True H1975_Epitope_Rep2 1284.59142051352 1284.5903299358602 83.229 2 0.0017708626256619725 0.009580003919092512 0.9438714419765777 ['ENSG00000062582|ENST00000317534|MRPS24'] 113394 19631 TQLGPPYHILV True PC9_epitope_Rep2 1236.68665831104 1236.68556993586 80.896 2 0.0017581699915100216 0.009580003919092512 0.9438714419765777 ['ENSG00000119616|ENST00000341162|FCF1'] 9637 11453 AYGHFGRDSF True PC9_epitope_Rep1 1155.50975657823 1155.50812490379 48.932 3 0.001753301269123624 0.009580003919092512 0.9438714419765777 ['ENSG00000168906|ENST00000306434|MAT2A', 'ENST00000477975.2_1_3:112415757-112416508:-|nuORF'] 31359 5133 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.3913849679301 24.822 1 0.0017523196554798156 0.009580003919092512 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 48643 5245 KEKLIAPVA True H1975_Epitope_Rep2 967.6066170851898 967.60552993586 25.241 2 0.0017510927706749448 0.009580003919092512 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000544151.1_1_12:21807353-21810687:-|nuORF'] 135024 6357 YAHPSGTAL True PC9_epitope_Rep2 915.4450310633499 915.44392993586 29.856 2 0.0017465866266933817 0.009580003919092512 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF'] 20439 6724 EPQYPVRSA True PC9_epitope_Rep5 1045.5192586327698 1045.5181699358602 30.834 2 0.0017350275764215428 0.009580003919092512 0.9438714419765777 ['ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 35559 15916 GTIGLIHAV True PC9_epitope_Rep3 879.51780208079 879.51670993586 66.368 2 0.0017249072515583893 0.009580003919092512 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 24382 13878 FAENNFTEL True NCI_RA007_Epitope_Rep5 1083.48728979815 1083.48618993586 60.058 2 0.0017243101126329613 0.009580003919092512 0.9438714419765777 ['ENSG00000066336|ENST00000378538|SPI1', 'nc|ENSG00000066336|P17947-2|SPI1'] 136390 13660 YHDYGHLEL True PC9_epitope_Rep5 1145.51417325233 1145.51251490379 57.566 3 0.0017091992480867775 0.009580003919092512 0.9438714419765777 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 86233 16003 QPYMPTVSA True PC9_epitope_Rep3 992.4637179025999 992.46262993586 66.698 2 0.0016946053186503447 0.009580003919092512 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 17163 14807 EHAEALLL True PC9_epitope_Rep2 894.4810822188999 894.48053496793 62.22 1 0.0016780853971661925 0.009580003919092512 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 4716 17066 ALDSTNVEL True PC9_epitope_Rep3 960.47639076128 960.47584496793 70.796 1 0.0016477744161890423 0.009580003919092512 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 1218 12373 AEDFTIFKA True H1975_Epitope_Rep3 1040.5178616504397 1040.51676993586 52.779 2 0.001617122439854889 0.009580003919092512 0.9438714419765777 ['CFAP36|p.M284Cfs*3|1|0.11|ENSG00000163001|chr2:55544291-55544291|G/-|frameshift_variant', 'ENSG00000163001|ENST00000349456|CFAP36', 'nc|ENSG00000163001|Q96G28-2|CFAP36'] 24571 21751 FALPYVIVL True H1975_Epitope_Rep2 1033.6212045201698 1033.62010993586 89.972 2 0.0016052846945061863 0.009580003919092512 0.9438714419765777 ['nc|ENSG00000163607|Q8N3Z3-2|GTPBP8', 'ENSG00000163607|ENST00000383678|GTPBP8'] 107507 9975 TAAPPAQPL True PC9_epitope_Rep2 864.4705175352 864.46942993586 43.698 2 0.0016021347930091697 0.009580003919092512 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 107443 15108 SYVPKVAGL True PC9_epitope_Rep2 932.5331177917599 932.53202993586 63.37 2 0.00158807949317096 0.009580003919092512 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 110152 22308 TIDDIVLTI True PC9_epitope_Rep5 1001.56447748969 1001.56338993586 90.815 2 0.0015837673300589808 0.009580003919092512 0.9438714419765777 ['ENSG00000188782|ENST00000456354|CATSPER4', 'nc|ENSG00000188782|Q7RTX7-2|CATSPER4'] 24358 6874 FAEDGARTV True PC9_epitope_Rep5 964.4614094034799 964.46030993586 31.411 2 0.0015819363923264464 0.009580003919092512 0.9438714419765777 ['ENSG00000157240|ENST00000287934|FZD1'] 6419 13282 APSGNFVAC True PC9_epitope_Rep3 864.37998827864 864.37888993586 56.123 2 0.0015727827423555481 0.009580003919092512 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 46765 14196 IVCDVPSASA True PC9_epitope_Rep3 960.45863252216 960.4580849679301 59.689 1 0.0015611307439342352 0.009580003919092512 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 33362 11054 GLELEELEA True H1975_Epitope_Rep1 1001.4917064722498 1001.4911749679301 47.48 1 0.001553462642878009 0.009580003919092512 0.9438714419765777 ['ENSG00000144736|ENST00000325599|SHQ1', 'nc|ENSG00000144736|Q6PI26-2|SHQ1', 'ENST00000437111.1_1_10:52389508-52390123:-|nuORF'] 44907 10424 IQDNKFIEA True PC9_epitope_Rep2 1076.55022440788 1076.54912993586 45.417 2 0.0015197269399893068 0.00962145453753891 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 46798 7597 IVDKSGVVRV True PC9_epitope_Rep5 1070.64479349906 1070.64368993586 34.172 2 0.0015063604621639837 0.00962145453753891 0.9438714419765777 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000571079.1_1_17:7497531-7497639:-|nuORF', 'TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1'] 26463 19821 FIPPDGNFRL True PC9_epitope_Rep1 1174.61349337078 1174.6123899358602 81.056 2 0.0014678625102834805 0.00962145453753891 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2', 'ENST00000480373.1_1_10:75888732-75889691:-|nuORF', 'ENSG00000185009|ENST00000355264|AP3M1'] 97644 6451 SHAQTVVL True PC9_epitope_Rep4 853.46576650793 853.46466993586 31.91 2 0.001456863282671812 0.00962145453753891 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 53928 4823 KYIQRQETI True NCI_RA007_Epitope_Rep4 1177.64552177505 1177.6444299358602 24.987 2 0.001449312865755324 0.00962145453753891 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 53999 9470 KYLEERAMRQF True PC9_epitope_Rep4 1469.74491854649 1469.74327490379 44.034 3 0.0014425248200859934 0.00962145453753891 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 47646 11323 IYPPKLHQF True PC9_epitope_Rep2 1141.62841515893 1141.62676490379 48.876 3 0.001440519900564329 0.00962145453753891 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 106646 18483 SYADAFQFL True NCI_RA007_Epitope_Rep3 1060.4865615221602 1060.48546993586 80.88 2 0.001440472445387758 0.00962145453753891 0.9438714419765777 ['ENSG00000242732|ENST00000609883|RTL5'] 123691 6719 VIPELNGK True NCI_RA007_Epitope_Rep4 868.50181766348 868.50072993586 32.468 2 0.001421493216732405 0.00962145453753891 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 39590 9510 HPKYSDMIVA True PC9_epitope_Rep4 1159.56957995347 1159.56848993586 44.191 2 0.0014095291067704688 0.00962145453753891 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 87571 20707 QTPEFFQDV True PC9_epitope_Rep2 1109.5029398622898 1109.50184993586 85.085 2 0.0013579325330150722 0.009642382952789326 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 119474 8346 VEQDQVLEA True H1975_Epitope_Rep2 1029.4978544818498 1029.4967499358602 37.055 2 0.001352597322163737 0.009642382952789326 0.9438714419765777 ['nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B', 'nc|ENSG00000138182|Q96Q89-5|KIF20B', 'nc|ENSG00000138182|Q96Q89-4|KIF20B'] 2414 15976 AEQLMTLISA True H1975_Epitope_Rep3 1075.55834656343 1075.5577749679298 66.909 1 0.0013456608821693578 0.009642382952789326 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 75582 17567 NQPGVLIQV True PC9_epitope_Rep6 966.5498304850599 966.54928496793 80.212 1 0.0013418637431528609 0.009642382952789326 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'HSPA8|p.E444V|1|0.1|ENSG00000109971|chr11:123058823-123058823|T/A|missense_variant', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 106905 18141 SYIPSTVFF True NCI_RA007_Epitope_Rep4 1059.52769805815 1059.52660993586 78.507 2 0.001311037948263239 0.00966225626740947 0.9438714419765777 ['TXNL4B|p.D74H|2|0.22|ENSG00000140830|chr16:72089051-72089051|C/G|missense_variant', 'ENSG00000140830|ENST00000268483|TXNL4B'] 57142 11179 LEEQNELLSA True H1975_Epitope_Rep2 1144.5611830143998 1144.56008993586 48.038 2 0.0012775327845505966 0.00966225626740947 0.9438714419765777 ['ENSG00000132688|ENST00000368223|NES'] 116657 23151 TYIPPLLVAF True PC9_epitope_Rep4 1132.6532329244399 1132.65212993586 97.271 2 0.0012576371125305069 0.00966225626740947 0.9438714419765777 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF', 'ENST00000561809.1_1_16:75589903-75590146:-|nuORF'] 98018 7626 SHSSVILKM True PC9_epitope_Rep2 1000.5375515492 1000.53644993586 34.705 2 0.0012567867004231882 0.00966225626740947 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 29577 16667 FVIRNIVEA True PC9_epitope_Rep4 1059.6076797143498 1059.60658993586 72.083 2 0.0012552057464996467 0.00966225626740947 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 62260 13300 LLQESLAQA True PC9_epitope_Rep6 971.52876068731 971.52766993586 62.814 2 0.0012526899908177037 0.00966225626740947 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 34777 20239 GQSELTLLL True PC9_epitope_Rep6 972.54916177872 972.54861496793 90.533 1 0.0012432983155195921 0.00966225626740947 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 94527 11562 RYIFAKNLF True NCI_RA007_Epitope_Rep3 1170.6549642599398 1170.65386993586 52.61 2 0.001237751803032672 0.00966225626740947 0.9438714419765777 ['nc|ENSG00000114956|Q16854-3|DGUOK', 'nc|ENSG00000114956|Q16854-5|DGUOK', 'ENSG00000114956|ENST00000264093|DGUOK'] 30112 19756 FYPPKVELF True PC9_epitope_Rep4 1138.60628273202 1138.6051899358602 84.115 2 0.0012314766511210625 0.00966225626740947 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 56898 9639 LEDPSQLPP True H1975_Epitope_Rep1 994.49712620586 994.49602993586 42.005 2 0.0012175053964116837 0.00970472398111278 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 40116 8870 HRDLPIKL True PC9_epitope_Rep4 990.5974493838199 990.59634993586 41.65 2 0.0012029068330847434 0.00970472398111278 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 109962 7185 THSLETQEL True PC9_epitope_Rep6 1056.5087535187201 1056.5076499358602 36.72 2 0.0011986901204546004 0.00970472398111278 0.9438714419765777 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 24468 16963 FAIDPHLLL True NCI_RA007_Epitope_Rep4 1037.59096702105 1037.5898699358602 73.515 2 0.0011982222870134895 0.00970472398111278 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 77797 12757 PAEPAFLA True H1975_Epitope_Rep1 814.4225047136199 814.4219549679301 54.13 1 0.0011952071738017362 0.00970472398111278 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 72016 18329 MQIQRVVI True PC9_epitope_Rep5 985.5742714110899 985.57316993586 75.518 2 0.0011782347403149897 0.009725213758893023 0.9438714419765777 ['ENST00000392987.7_1_19:14817461-14817590:+|nuORF', 'ENST00000601134.5_1_19:14805840-14818739:+|nuORF', 'ENST00000597301.5_1_19:14804303-14827921:+|nuORF', 'nc|ENSG00000160961|Q96JL9-3|ZNF333', 'ENSG00000160961|ENST00000292530|ZNF333'] 130295 14080 VTTGAVVPV True PC9_epitope_Rep2 841.4909186266099 841.48982993586 59.434 2 0.001175062628964178 0.009725213758893023 0.9438714419765777 ['ENST00000520272.6_1_8:38089657-38090580:+|nuORF', 'ENST00000533100.5_1_8:38089049-38090580:+|nuORF', 'ENST00000397166.6_1_8:38089123-38090580:+|nuORF'] 43935 14462 ILENAVPGT True PC9_epitope_Rep2 912.4916469025999 912.49054993586 60.899 2 0.001166747080817398 0.009725213758893023 0.9438714419765777 ['PCDHGB5|p.G549Afs*36|1|0.17|ENSG00000276547|chr5:141399771-141399771|G/-|frameshift_variant', 'nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5', 'ENSG00000276547|ENST00000617380|PCDHGB5'] 129545 12884 VTGAVVTAV True PC9_epitope_Rep4 815.47526856247 815.47472496793 57.434 1 0.0011012907086379014 0.009725213758893023 0.9438714419765777 ['ENST00000494367.1_1_6:29976031-29977313:+|nuORF'] 109781 14430 THISPNAIF True PC9_epitope_Rep4 998.5185303567799 998.51742993586 63.414 2 0.0010875428962516306 0.009725213758893023 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant'] 129059 10465 VTANTMENV True PC9_epitope_Rep5 977.44879611445 977.44768993586 45.239 2 0.0010589680769890093 0.009725213758893023 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1'] 75627 10986 NQSDTSVSL True PC9_epitope_Rep3 949.43525422529 949.4347049679301 47.243 1 0.0010428533685071938 0.00974633424705217 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 9427 11509 AVVPSTATV True PC9_epitope_Rep4 843.4701831820299 843.46963496793 52.031 1 0.001030564101527788 0.00974633424705217 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 31698 10102 GEIGLGTPP True NCI_RA007_Epitope_Rep5 839.43888305375 839.43833496793 45.493 1 0.0010217445359303478 0.00974633424705217 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA'] 109357 13272 TGIQPGTSL True PC9_epitope_Rep1 872.46034677432 872.45924993586 55.915 2 0.0010000595112486124 0.009767876955206997 0.9438714419765777 ['ENSG00000173653|ENST00000309657|RCE1', 'ENST00000533277.5_1_11:66611269-66612734:+|nuORF'] 42197 6659 IEGKDVFREA True NCI_RA007_Epitope_Rep4 1162.59823722946 1162.5965849037902 32.236 3 0.000993127279466769 0.009788566953797965 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 16036 6548 EEAGAELQA True H1975_Epitope_Rep2 916.4137905047199 916.41268993586 30.097 2 0.0009774318080251103 0.009788566953797965 0.9438714419765777 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 113344 6231 TQKSLSLSPG True NCI_RA007_Epitope_Rep1 1016.5502244078799 1016.5496749679301 28.27 1 0.0009247188258726704 0.009788566953797965 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 129006 11120 VSYQSVLS True H1975_Epitope_Rep1 881.4494477374499 881.4488949679301 47.738 1 0.0009177289258476848 0.009788566953797965 0.9438714419765777 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF', 'ENST00000590884.5_1_18:43437816-43458370:-|nuORF'] 71082 6593 METAAAVAA True H1975_Epitope_Rep2 833.3953039896098 833.39475496793 30.27 1 0.0009171847514411636 0.009788566953797965 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 105762 21074 SVIDIINGEA True PC9_epitope_Rep5 1029.5342399905699 1029.5331499358601 86.121 2 0.0009039673261843306 0.009809892547961892 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant'] 126167 12007 VPFQNAATA True PC9_epitope_Rep1 917.4606811274898 917.45958993586 51.047 2 0.0009024930245238206 0.009809892547961892 0.9438714419765777 ['nc|ENSG00000182831|Q14CZ0-2|HAPSTR1', 'ENSG00000182831|ENST00000327827|HAPSTR1'] 27924 10781 FQNNVQVKV True PC9_epitope_Rep5 1074.5821932425 1074.58108993586 46.46 2 0.0008738091661916887 0.00982971967901181 0.9438714419765777 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9', 'ENST00000550699.5_1_12:58109828-58111744:+|nuORF'] 77011 7287 NVTTEVKSV True PC9_epitope_Rep5 975.5236753068699 975.52256993586 32.994 2 0.0008728911428776737 0.00982971967901181 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 77009 7271 NVTTEVKSV True PC9_epitope_Rep1 975.5236753068699 975.52256993586 32.78 2 0.0008535231124415072 0.00982971967901181 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 3999 6704 AHFQKSYTL True PC9_epitope_Rep4 1093.5556441414901 1093.5545499358602 32.971 2 0.0008354678527053629 0.00982971967901181 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000465023.1_1_22:37163271-37171742:-|nuORF', 'ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 56901 9465 LEDPSQLPP True H1975_Epitope_Rep3 994.49712620586 994.49602993586 41.411 2 0.0008274098536616335 0.00982971967901181 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 14080 13450 DSDMQTLVY True H1975_Epitope_Rep3 1070.45902644498 1070.45847496793 57.009 1 0.0008262319016929218 0.00982971967901181 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51'] 34980 9590 GRADGYVL True PC9_epitope_Rep2 849.43446637965 849.43336993586 42.232 2 0.0008204834651156185 0.00982971967901181 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 88747 4984 RDFEGKVV True NCI_RA007_Epitope_Rep4 948.5028802926398 948.50178993586 25.648 2 0.0007899572344930656 0.00982971967901181 0.9438714419765777 ['ENSG00000066379|ENST00000332435|POLR1H'] 7174 21269 ARDEIIWLL True PC9_epitope_Rep4 1127.63389446219 1127.63337496793 89.98 1 0.0007835154558954319 0.00982971967901181 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 71366 14852 MIAQTVTAV True PC9_epitope_Rep2 932.50010341132 932.49900993586 62.393 2 0.0007652947398865177 0.009850395755414456 0.9438714419765777 ['ENSG00000005022|ENST00000317881|SLC25A5', 'ENST00000463551.1_1_X:118604271-118605018:+|nuORF', 'ENSG00000169100|ENST00000381401|SLC25A6'] 30877 9129 GARLQLQAL True NCI_RA007_Epitope_Rep3 968.5767139392398 968.57560993586 42.996 2 0.0007552073747477652 0.009850395755414456 0.9438714419765777 ['SVA_D_dup1229|chr17:30522805-30524227:+|1.1342495796522174|0.476847412502663|1.25|502.0|48|1|anti-sense'] 33168 6272 GKSTISTEL True NCI_RA007_Epitope_Rep4 934.49712620586 934.49602993586 30.73 2 0.0007364990544593611 0.009850395755414456 0.9438714419765777 ['ENSG00000095906|ENST00000262302|NUBP2', 'ENST00000566447.5_1_16:1832991-1836957:+|nuORF', 'ENST00000566090.5_1_16:1832991-1836988:+|nuORF', 'NUBP2|p.K115Sfs*31|1|0.24|ENSG00000095906|chr16:1787684-1787684|A/-|frameshift_variant', 'NUBP2|p.L37V|1|0.22|ENSG00000095906|chr16:1786629-1786629|C/G|missense_variant', 'ENST00000568706.1_1_16:1834024-1837680:+|nuORF'] 32755 9425 GIAGSLKTV True PC9_epitope_Rep2 844.5018176634801 844.50072993586 41.593 2 0.000723570409050885 0.009850395755414456 0.9438714419765777 ['ENSG00000008083|ENST00000341776|JARID2'] 56924 6723 LEDRPSNLP True H1975_Epitope_Rep2 1039.52982331647 1039.5287299358602 30.774 2 0.0007096480646088664 0.009850395755414456 0.9438714419765777 ['ENSG00000108239|ENST00000225235|TBC1D12'] 86352 13693 QQLEALTRV True PC9_epitope_Rep3 1056.5927579262 1056.5916699358602 57.745 2 0.000707024656007834 0.009863989918741581 0.9438714419765777 ['ENSG00000176531|ENST00000292140|PHLDB3', 'nc|ENSG00000176531|Q6NSJ2-2|PHLDB3', 'ENST00000596902.1_1_19:44005819-44008744:-|nuORF'] 1824 11827 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.48512993586 50.487 2 0.0007024774328631164 0.009863989918741581 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 99578 8166 SLFGSPVAK True NCI_RA007_Epitope_Rep3 904.50181766348 904.50072993586 39.24 2 0.0007007424718316222 0.009863989918741581 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB'] 119 19890 AAAWPLLL True H1975_Epitope_Rep1 853.5061747679299 853.50506993586 82.781 2 0.0006709005806851838 0.009863989918741581 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 92181 4362 RQFSGARNQL True NCI_RA007_Epitope_Rep4 1175.6159529822698 1175.61484993586 23.126 2 0.0006504837473763508 0.009863989918741581 0.9438714419765777 ['nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3'] 45420 4414 ISDSEGFK True PC9_epitope_Rep4 881.4130622287299 881.41196993586 23.426 2 0.0006340592920413884 0.009863989918741581 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 8568 5231 AVADAVIEK True NCI_RA007_Epitope_Rep3 914.50729696674 914.50618993586 27.581 2 0.0006281535102931555 0.009863989918741581 0.9438714419765777 ['ENST00000369426.9_1_1:119575536-119588262:-|nuORF', 'ENSG00000116874|ENST00000235521|WARS2'] 45092 6054 IQRTPKIQVYS True NCI_RA007_Epitope_Rep3 1331.75613485319 1331.7550299358602 30.793 2 0.0006074582258540358 0.009863989918741581 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 101601 8548 SPFAEGTSA True PC9_epitope_Rep4 865.38176210045 865.3806699358599 40.359 2 0.0005977635699472694 0.009863989918741581 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 29410 21591 FVFPGELLL True H1975_Epitope_Rep3 1033.5848190114498 1033.5837299358602 90.215 2 0.0005760511094233382 0.009863989918741581 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 120674 13080 VGAPKIPSV True PC9_epitope_Rep1 866.5225531080599 866.52144993586 55.18 2 0.0005720237878421388 0.009863989918741581 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 39604 10194 HPLLGVSA True PC9_epitope_Rep2 792.4493881678001 792.44828993586 44.547 2 0.0005482391253623669 0.009863989918741581 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 14148 5606 DSIKLDDDSER True NCI_RA007_Epitope_Rep1 1291.5891886673899 1291.58755490379 25.87 3 0.0005353775847278259 0.009863989918741581 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1', 'CAND1|p.L505Qfs*32|1|0.65|ENSG00000111530|chr12:67305182-67305186|TCTGT/-|frameshift_variant', 'ENST00000541058.1_1_12:67663497-67675834:+|nuORF', 'CAND1|p.K133Rfs*10|1|0.6|ENSG00000111530|chr12:67295059-67295059|A/-|frameshift_variant', 'ENST00000539434.1_1_12:67663527-67686741:+|nuORF'] 79968 15841 PITPSPTV True PC9_epitope_Rep3 810.4487194614601 810.44762993586 66.086 2 0.0005336253366666201 0.009863989918741581 0.9438714419765777 ['ENST00000486360.1_1_1:203045208-203045709:+|nuORF'] 35490 5720 GTFGGLGSK True NCI_RA007_Epitope_Rep5 822.42356734278 822.42246993586 28.69 2 0.0005075862306551217 0.009863989918741581 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 106704 11792 SYASLQQNKW True PC9_epitope_Rep4 1223.59348620219 1223.5923899358602 53.127 2 0.0004986152710108957 0.009863989918741581 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 100712 14635 SLRGLQEQL True PC9_epitope_Rep3 1042.5771078620598 1042.5760099358602 61.425 2 0.0004926564324384069 0.009863989918741581 0.9438714419765777 ['nc|ENSG00000149639|O94964-1|MTCL2', 'ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-4|MTCL2'] 81257 11914 PPPLPPPPP True PC9_epitope_Rep5 907.51673945163 907.51564993586 50.825 2 0.0004828696177654443 0.009863989918741581 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000135723|ENST00000258201|FHOD1', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000122574|ENST00000242140|WIPF3', 'ENSG00000090470|ENST00000204549|PDCD7'] 75964 7256 NRGPAYGL True PC9_epitope_Rep4 846.4348007328199 846.43370993586 35.219 2 0.0004552767050799455 0.009863989918741581 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF', 'TAGLN2|p.V114Gfs*27|1|0.1|ENSG00000158710|chr1:159919674-159919675|CA/-|frameshift_variant', 'ENST00000592923.5_1_19:11649661-11650145:+|nuORF', 'ENST00000588468.1_1_19:11649742-11652758:+|nuORF', 'CNN1|p.Q216Rfs*4|1|0.2|ENSG00000130176|chr19:11549466-11549466|C/-|frameshift_variant', 'ENSG00000130176|ENST00000252456|CNN1'] 7005 9908 AQQPTAVQV True PC9_epitope_Rep5 940.4977949121998 940.49668993586 43.083 2 0.0004236771121114996 0.009863989918741581 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 95810 7059 SDGFNGADLR True H1975_Epitope_Rep3 1050.47303671634 1050.47192993586 32.117 2 0.000409597540713986 0.009863989918741581 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6'] 139797 10670 YVDDGLIS True H1975_Epitope_Rep1 880.4178132559999 880.41726496793 46.001 1 0.00040219169740670046 0.009863989918741581 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'PKM|p.L183F|1|0.38|ENSG00000067225|chr15:72209691-72209691|G/A|missense_variant', 'nc|ENSG00000067225|P14618-2|PKM'] 132576 22200 VYPNWAIGL True PC9_epitope_Rep2 1031.5440168286298 1031.54290993586 90.874 2 0.00039639225280728576 0.009863989918741581 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 104978 22656 STIDILYQL True PC9_epitope_Rep2 1064.57537652656 1064.5748749679299 92.643 1 0.00038162933644071055 0.009863989918741581 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 12207 13055 DINTDGAVNF True NCI_RA007_Epitope_Rep5 1064.47745339044 1064.47634993586 56.893 2 0.0003577608236380422 0.009863989918741581 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 140863 14494 YYTNSLEKL True PC9_epitope_Rep5 1129.5655401188499 1129.56444993586 60.751 2 0.00032552859588648144 0.009863989918741581 0.9438714419765777 ['ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3'] 11616 11272 DHARTITVAL True PC9_epitope_Rep2 1095.60365696307 1095.60254993586 48.684 2 0.0003111797226735567 0.009863989918741581 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 197 9540 AAFDGGFTVK True NCI_RA007_Epitope_Rep4 1011.5025459394699 1011.50144993586 43.546 2 0.00029266835617376355 0.009863989918741581 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 90888 16478 RLAVLFSGA True PC9_epitope_Rep4 932.5443511817999 932.54324993586 71.354 2 0.0002722896623320718 0.009863989918741581 0.9438714419765777 ['ENSG00000129226|ENST00000250092|CD68', 'ENST00000581621.1_1_17:7482995-7483061:+|nuORF', 'nc|ENSG00000129226|P34810-2|CD68', 'nc|ENSG00000129226|P34810-3|CD68'] 117021 15023 TYQDIQNTI True PC9_epitope_Rep4 1094.52440358286 1094.52387496793 65.723 1 0.00025982985905649304 0.009863989918741581 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A'] 24262 18618 FAADIISVL True H1975_Epitope_Rep3 947.53278343859 947.53168993586 78.074 2 0.0002443526316735016 0.009863989918741581 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF', 'ENST00000435761.5_1_3:184018386-184019655:+|nuORF', 'ENST00000463602.1_1_3:184018386-184019571:+|nuORF', 'ENST00000487475.5_1_3:184017042-184019447:+|nuORF', 'ENST00000459910.5_1_3:184017042-184019571:+|nuORF'] 62430 21254 LLSEDFVSV True PC9_epitope_Rep5 1007.5175272972699 1007.5169749679301 86.804 1 0.00023192995964639368 0.009863989918741581 0.9438714419765777 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'nc|ENSG00000006282|Q8TB22-4|SPATA20', 'ENST00000503063.5_1_17:48625445-48628667:+|nuORF'] 42571 13329 IESPPEINT True PC9_epitope_Rep1 998.4920408254201 998.49094993586 56.129 2 0.00017571179627086307 0.009863989918741581 0.9438714419765777 ['CON__P02668'] 101655 20979 SPFPLEAV True PC9_epitope_Rep5 858.44871946146 858.44762993586 85.755 2 0.0001746726218192811 0.009863989918741581 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 116863 23012 TYNMVLNLL True PC9_epitope_Rep2 1079.56851732431 1079.56740993586 94.009 2 0.00016151110186021114 0.009863989918741581 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 76539 4614 NTDPHSQEYV True H1975_Epitope_Rep2 1188.5047307674402 1188.50362993586 22.85 2 0.00014730422882549022 0.009863989918741581 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 17667 7243 EHSGHTIVSL True PC9_epitope_Rep4 1078.54072235334 1078.5396299358601 35.166 2 0.00013525562464262837 0.009863989918741581 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16'] 72704 20899 MYPDVFAHF True PC9_epitope_Rep2 1125.4953523840497 1125.4942499358601 85.833 2 0.00013268994828846597 0.009863989918741581 0.9438714419765777 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 56899 9617 LEDPSQLPP True H1975_Epitope_Rep2 994.49712620586 994.49602993586 41.969 2 0.00011784657367472981 0.009885501987963587 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 7458 14476 ASDMLQLEY True H1975_Epitope_Rep1 1068.4797618895598 1068.47917496793 60.881 1 0.00011559408866890111 0.009906797888287818 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 35729 2805 GTSSVIVSR True NCI_RA007_Epitope_Rep1 904.4977949122 904.49668993586 14.756 2 0.00010988974704197994 0.009906797888287818 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 7003 8901 AQQPTAVQV True PC9_epitope_Rep4 940.4977949121998 940.49668993586 41.776 2 3.532032835539258e-05 0.009926798010296067 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 116949 16928 TYPIKTPTF True PC9_epitope_Rep1 1066.5698972233001 1066.5688099358601 69.937 2 2.4952953021297455e-05 0.009926798010296067 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 118643 9009 VEAPPVVTA True H1975_Epitope_Rep1 881.4858332461699 881.48472993586 39.557 2 2.1324424325821612e-05 0.009926798010296067 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 87901 13391 QVMQGMGVSA True PC9_epitope_Rep2 1006.4575869763398 1006.45648993586 56.789 2 1.3950538761526478e-05 0.009926798010296067 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 129912 5459 VTLTSEEEAR True PC9_epitope_Rep6 1133.5564319871298 1133.55532993586 28.932 2 3.5778185698072976e-06 0.009926798010296067 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF'] 84271 12575 QEYFGSLAA True H1975_Epitope_Rep1 984.4552613938797 984.45416993586 53.417 2 0.0 0.009926798010296067 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 39577 10733 HPIPDSSPL True PC9_epitope_Rep5 961.4868958753301 961.48578993586 46.277 2 0.0 0.009926798010296067 0.9438714419765777 ['ENSG00000105550|ENST00000593756|FGF21'] 5217 4174 ALQASALK True NCI_RA007_Epitope_Rep5 800.47560291564 800.4745099358599 22.579 2 0.0 0.009926798010296067 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 35770 19018 GTVEQIVYL True PC9_epitope_Rep6 1020.5491617787197 1020.54806993586 85.796 2 -0.0001178563609706255 0.009969808206086145 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 102694 16601 SQDPTMIGV True PC9_epitope_Rep1 946.44298245802 946.44243496793 68.68 1 -0.00014572805479412727 0.009969808206086145 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 24270 6104 FAAEAQKL True H1975_Epitope_Rep2 876.4705175352 876.46942993586 28.456 2 -0.00017046222451269047 0.00999000999000999 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 85109 17978 QISDTSVVL True PC9_epitope_Rep1 960.51277627 960.51222496793 73.945 1 -0.00018007036300172373 0.00999000999000999 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 44740 8104 IPRNTVVPT True PC9_epitope_Rep2 995.57637958607 995.57528993586 36.53 2 -0.00018868641827989821 0.00999000999000999 0.9438714419765777 ['ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000442006.2_1_1:39175842-39176013:+|nuORF', 'ENST00000509378.1_1_4:165110527-165110881:+|nuORF'] 136452 17448 YHGLTVPL True PC9_epitope_Rep3 898.4912529797799 898.49014993586 72.288 2 -0.0001889921178800755 0.00999000999000999 0.9438714419765777 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 21197 18456 ERFEIPIKV True PC9_epitope_Rep1 1129.6495445263297 1129.64788490379 75.783 3 -0.000200506644044279 0.00999000999000999 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 105291 16189 STTNGGILTV True PC9_epitope_Rep2 961.50802524273 961.50692993586 67.522 2 -0.00022180519962639457 0.00999000999000999 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 92387 4700 RQREQEIAL True NCI_RA007_Epitope_Rep3 1141.6203696563698 1141.61872490379 25.431 3 -0.00022720960016951632 0.00999000999000999 0.9438714419765777 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 77116 4788 NYARGHYTI True NCI_RA007_Epitope_Rep3 1093.5304920228102 1093.52938993586 25.799 2 -0.0002475574973987721 0.010009336257246456 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 103830 13287 SRIARALAL True PC9_epitope_Rep3 969.6083484206899 969.60724993586 56.143 2 -0.00025993319475857565 0.010009336257246456 0.9438714419765777 ['ENSG00000142871|ENST00000451137|CCN1'] 126163 20908 VPFPTPLEA True PC9_epitope_Rep5 969.5171333744498 969.51602993586 85.477 2 -0.0002648254213802333 0.010009336257246456 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 84718 15666 QHFEHLAPVL True PC9_epitope_Rep1 1189.6243924076498 1189.6227449037901 65.08 3 -0.00026689626318825377 0.010009336257246456 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 38285 18539 HFIAEHYMF True PC9_epitope_Rep5 1193.53280052193 1193.53114490379 76.333 3 -0.0002672241606184985 0.010009336257246456 0.9438714419765777 ['ENSG00000143753|ENST00000323699|DEGS1', 'ENST00000498813.1_1_1:224377853-224378832:+|nuORF'] 84726 12557 QHFRNLEAL True PC9_epitope_Rep5 1126.5883412521 1126.58668490379 53.3 3 -0.00029468080843118963 0.010009336257246456 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6', 'ENST00000478914.1_1_22:42052971-42057696:+|nuORF'] 31992 13285 GETIFVTAP True H1975_Epitope_Rep2 933.48074786573 933.47964993586 56.23 2 -0.00032641973888217733 0.010009336257246456 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 47460 19821 IYIWDLNNF True NCI_RA007_Epitope_Rep3 1196.5866099165999 1196.58607496793 86.375 1 -0.0003332798212897944 0.010009336257246456 0.9438714419765777 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-5|SEC31A', 'ENST00000436790.6_1_4:83784452-83812260:-|nuORF'] 54628 17524 LADLSCLVY True H1975_Epitope_Rep2 995.4997690581499 995.49866993586 72.706 2 -0.0003451636631897276 0.010009336257246456 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'DCAF5-ERH|1|fusion', 'ENST00000523006.1_1_7:139219111-139219246:+|nuORF'] 132229 17460 VYKPVSIYL True PC9_epitope_Rep4 1080.6219327961599 1080.62082993586 75.158 2 -0.00035193604781734504 0.010009336257246456 0.9438714419765777 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 101623 15696 SPFGSITSA True PC9_epitope_Rep4 865.4181476091701 865.4175949679301 68.3 1 -0.0003641837833374532 0.010009336257246456 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 123854 17126 VIYPARISL True PC9_epitope_Rep4 1030.61751612206 1030.61640993586 73.877 2 -0.0004208313604302742 0.010030612909529082 0.9438714419765777 ['nc|ENSG00000132002|P25685-2|DNAJB1', 'ENSG00000132002|ENST00000254322|DNAJB1'] 17422 4889 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 26.347 3 -0.0004408676149611591 0.010030612909529082 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 118089 9780 VATVSLPR True PC9_epitope_Rep1 841.5021520166499 841.50104993586 42.48 2 -0.000531252756680901 0.010073379358256264 0.9438714419765777 ['CON__P00761'] 129818 20213 VTLEQTVTL True PC9_epitope_Rep6 1002.5597264624199 1002.55862993586 90.425 2 -0.0005438546705605923 0.010073379358256264 0.9438714419765777 ['ENSG00000083535|ENST00000326291|PIBF1'] 76452 7054 NTAQGFRTV True PC9_epitope_Rep3 992.5039429218 992.50284993586 32.144 2 -0.000566351501097249 0.010073379358256264 0.9438714419765777 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 59053 11138 LGDDYLVS True NCI_RA007_Epitope_Rep2 880.4178132559999 880.41726496793 47.905 1 -0.0005906187058474239 0.010089613123006488 0.9438714419765777 ['KIF20B|p.N1031D|1|0.42|ENSG00000138182|chr10:89737932-89737932|A/G|missense_variant'] 61376 7564 LLEKEREDLY True H1975_Epitope_Rep1 1306.6768814729799 1306.6757899358602 34.087 2 -0.0006162628238467713 0.010089613123006488 0.9438714419765777 ['ENSG00000102189|ENST00000322349|EEA1'] 578 11234 AARLPLDAA True PC9_epitope_Rep5 896.5079656730799 896.50686993586 48.201 2 -0.0006345289061859887 0.010089613123006488 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 113429 19678 TQNDIISTL True PC9_epitope_Rep3 1003.51858992643 1003.51748993586 80.923 2 -0.000639303957354999 0.010089613123006488 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 109827 16363 THLGPLASL True PC9_epitope_Rep2 907.51271670035 907.51160993586 68.185 2 -0.000642884104209929 0.010089613123006488 0.9438714419765777 ['ENSG00000127399|ENST00000359623|LRRC61'] 30160 14043 FYSGSPTSY True PC9_epitope_Rep1 1007.4236269124299 1007.42252993586 58.854 2 -0.000648254288468232 0.010089613123006488 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1'] 3926 13036 AHDPISPVL True PC9_epitope_Rep4 947.50763131991 947.50652993586 58.036 2 -0.0006581119330021972 0.010089613123006488 0.9438714419765777 ['ENSG00000116199|ENST00000263733|FAM20B'] 139798 10830 YVDDGLIS True H1975_Epitope_Rep3 880.4178132559999 880.41726496793 46.737 1 -0.0006675094689109535 0.010089613123006488 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'PKM|p.L183F|1|0.38|ENSG00000067225|chr15:72209691-72209691|G/A|missense_variant', 'nc|ENSG00000067225|P14618-2|PKM'] 89073 2759 REERPPTLSA True H1975_Epitope_Rep2 1154.6043852390599 1154.6027249037902 14.64 3 -0.0007130132471328889 0.010089613123006488 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 86359 12966 QQLEPVTGQV True PC9_epitope_Rep4 1097.57168812845 1097.5705899358602 57.767 2 -0.0007195696394818523 0.010089613123006488 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 101671 10832 SPFSGLQKA True PC9_epitope_Rep1 933.49198125577 933.49088993586 46.551 2 -0.0007304898187152097 0.010089613123006488 0.9438714419765777 ['ENSG00000137802|ENST00000457542|MAPKBP1', 'nc|ENSG00000137802|O60336|MAPKBP1', 'nc|ENSG00000137802|O60336-3|MAPKBP1', 'ENST00000505061.5_1_15:42111671-42117631:+|nuORF', 'nc|ENSG00000137802|O60336-4|MAPKBP1'] 57568 13070 LELDTNLPA True H1975_Epitope_Rep1 984.51277627 984.51166993586 55.362 2 -0.0007421425715613305 0.010089613123006488 0.9438714419765777 ['nc|ENSG00000099977|P30046-2|DDT', 'ENSG00000099977|ENST00000398344|DDT', 'ENST00000444947.2_1_22:24315904-24316657:-|nuORF', 'ENSG00000099974|ENST00000215770|DDTL'] 1496 4564 AEENLDRRVP True H1975_Epitope_Rep3 1197.61019889549 1197.60856490379 22.675 3 -0.0007433163762031781 0.010089613123006488 0.9438714419765777 ['nc|ENSG00000115159|P43304-2|GPD2', 'ENSG00000115159|ENST00000438166|GPD2', 'ENST00000464846.5_1_2:157435526-157439427:+|nuORF'] 11759 16892 DHIHIIAL True PC9_epitope_Rep1 930.52870111766 930.52760993586 69.8 2 -0.000745093594759828 0.010089613123006488 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'nc|ENSG00000167770|Q96FW1-2|OTUB1'] 86557 8658 QRAQMTAAL True PC9_epitope_Rep3 988.5123994305198 988.51130993586 38.254 2 -0.0007524928732814611 0.010089613123006488 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 36820 21564 GVPQALFGV True PC9_epitope_Rep5 886.4912529797799 886.49014993586 87.986 2 -0.0007912937687675518 0.010089613123006488 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 16789 7417 EFHLNESGD True NCI_RA007_Epitope_Rep2 1046.43050319802 1046.4294099358601 33.475 2 -0.0007920170114676478 0.010089613123006488 0.9438714419765777 ['nc|ENSG00000119335|Q01105-3|SET', 'nc|ENSG00000119335|Q01105-4|SET', 'ENSG00000119335|ENST00000322030|SET', 'nc|ENSG00000119335|Q01105|SET', 'ENSG00000230667|ENST00000596516|SETSIP', 'nc|ENSG00000230667|P0DME0-1|SETSIP', 'ENST00000514799.1_1_5:59755891-59756539:-|nuORF'] 95570 5423 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 26.253 2 -0.0008540788167511038 0.010089613123006488 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 132494 10610 VYPEKLATKF True PC9_epitope_Rep4 1194.6648602372995 1194.66376993586 48.56 2 -0.0008678100552789555 0.010089613123006488 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 138303 10516 YRAPEAEL True PC9_epitope_Rep5 947.4712458111899 947.47014993586 45.437 2 -0.0008718872765242278 0.010089613123006488 0.9438714419765777 ['nc|ENSG00000152332|Q8TAS1-3|UHMK1', 'nc|ENSG00000152332|Q8TAS1-2|UHMK1', 'ENSG00000152332|ENST00000489294|UHMK1'] 140423 20020 YYFEGIKQTF True PC9_epitope_Rep1 1294.6233893481397 1294.6217549037901 81.832 3 -0.0008985775176174897 0.010089613123006488 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 9657 16230 AYGNVFSAF True NCI_RA007_Epitope_Rep3 974.4497820906199 974.44923496793 71.529 1 -0.0009034762061008732 0.010089613123006488 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 54808 19408 LAFEGPILL True H1975_Epitope_Rep2 971.5691689473098 971.5686249679301 80.553 1 -0.0009225928804425376 0.010089613123006488 0.9438714419765777 ['ENSG00000188994|ENST00000369577|ZNF292', 'ZNF292|p.S1288Pfs*23|1|0.24|ENSG00000188994|chr6:87257486-87257486|T/-|frameshift_variant'] 134503 17833 WVDETLSSV True PC9_epitope_Rep6 1034.49204082542 1034.49094993586 81.225 2 -0.0009228545519301564 0.010089613123006488 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 134358 18826 WSEITELLY True H1975_Epitope_Rep2 1152.5702911461199 1152.56918993586 78.168 2 -0.0009257587085261624 0.010089613123006488 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC'] 86372 8373 QQLGKVVQV True PC9_epitope_Rep6 997.5920296502098 997.59092993586 41.864 2 -0.0009668330911374226 0.01010889843377153 0.9438714419765777 ['ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 40071 8083 HRAPVVAIA True PC9_epitope_Rep1 932.5555845718399 932.55448993586 35.915 2 -0.0009734515683182302 0.01010889843377153 0.9438714419765777 ['ENSG00000131899|ENST00000316843|LLGL1'] 5314 8207 ALSGHLETV True PC9_epitope_Rep6 925.48689587533 925.48578993586 41.142 2 -0.000987227944689142 0.01010889843377153 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 113942 13847 TRKDIAVI True PC9_epitope_Rep4 914.5549158654999 914.55380993586 61.164 2 -0.000993305130491097 0.01010889843377153 0.9438714419765777 ['ERCC2|p.E512K|1|0.17|ENSG00000104884|chr19:45355674-45355674|C/T|missense_variant'] 106409 16111 SVTFVAEQV True PC9_epitope_Rep6 978.5022115862997 978.50110993586 74.31 2 -0.0010001130152916462 0.01010889843377153 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 88608 10173 RALTVPEL True NCI_RA007_Epitope_Rep3 897.5283667644899 897.52726993586 47.102 2 -0.0010280789704570272 0.01010889843377153 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENST00000518096.1_1_8:30210219-30210855:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6'] 2630 7172 AESPGVPVA True NCI_RA007_Epitope_Rep3 825.4232329896099 825.42212993586 35.326 2 -0.0010636293504364838 0.01010889843377153 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 120852 15510 VGDPSVHLL True PC9_epitope_Rep3 935.5076313199099 935.50652993586 64.81 2 -0.0010759294163022737 0.01010889843377153 0.9438714419765777 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 65996 10943 LSLTPEQWKS True NCI_RA007_Epitope_Rep4 1187.6186383208699 1187.61754993586 48.955 2 -0.0010760964344382544 0.01010889843377153 0.9438714419765777 ['HMCN1-IGLL5|1|fusion', 'nc|ENSG00000222037|P0CF74|IGLC6', 'nc|ENSG00000211685|A0M8Q6|IGLC7', 'nc|ENSG00000211679|P0DOY3|IGLC3', 'nc|ENSG00000211677|P0DOY2|IGLC2', 'nc|ENSG00000211675|P0CG04|IGLC1', 'nc|ENSG00000254709|B9A064|IGLL5'] 119802 4864 VEVESRNSPE True H1975_Epitope_Rep3 1144.53603089572 1144.5349299358602 23.835 2 -0.0010969516327580503 0.01010889843377153 0.9438714419765777 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 109660 5125 THDQSISQKL True PC9_epitope_Rep5 1155.5884008217497 1155.58675490379 24.738 3 -0.00111465255812874 0.01010889843377153 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 113635 7726 TRDAPLAV True PC9_epitope_Rep2 841.4657665079299 841.46466993586 35.093 2 -0.0011475441454147706 0.010130151843817787 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 37966 7457 HEFLHEVPAA True H1975_Epitope_Rep2 1148.56145779792 1148.55982490379 33.63 3 -0.0011620539659024803 0.010130151843817787 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 54771 12266 LAESNDVAI True PC9_epitope_Rep6 930.4658260775799 930.46472993586 58.561 2 -0.0011961173401927971 0.010151403409830376 0.9438714419765777 ['ENST00000425050.5_1_10:109631494-109803030:-|nuORF'] 47192 9503 IYAIVKEKY True PC9_epitope_Rep2 1125.64339651673 1125.6417449037901 41.898 3 -0.0012248999781925396 0.010151403409830376 0.9438714419765777 ['ENST00000473576.6_1_13:50235206-50237234:-|nuORF', 'EBPL|p.F172Lfs*7|1|0.15|ENSG00000123179|chr13:49661073-49661073|A/-|frameshift_variant', 'ENSG00000123179|ENST00000242827|EBPL', 'nc|ENSG00000123179|Q9BY08-5|EBPL', 'ENST00000569153.1_1_16:64294558-64295142:-|nuORF'] 125727 21304 VNEQLYIL True PC9_epitope_Rep5 990.5385970950199 990.53750993586 86.999 2 -0.0012675034605439768 0.010172873782617184 0.9438714419765777 ['SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 109004 8813 TEVPIATTA True H1975_Epitope_Rep2 901.47566248529 901.47511496793 38.866 1 -0.001279774680293414 0.010191248536363242 0.9438714419765777 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'ENST00000491005.5_1_1:220324595-220324754:-|nuORF'] 23068 5013 EVLEENEQR True NCI_RA007_Epitope_Rep1 1144.53603089572 1144.5349299358602 23.584 2 -0.001298746704255262 0.010191248536363242 0.9438714419765777 ['ENSG00000197651|ENST00000358859|CCER1'] 108618 6143 TEISTKEVP True H1975_Epitope_Rep2 1002.5233409536999 1002.52224993586 28.606 2 -0.0013009413617183151 0.010191248536363242 0.9438714419765777 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF'] 8440 4186 ATSDMDIGK True NCI_RA007_Epitope_Rep5 936.4222470134399 936.42114993586 22.629 2 -0.001320047366018432 0.010191248536363242 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1'] 17536 6526 EHINSVSAM True PC9_epitope_Rep4 986.44913046762 986.44802993586 32.224 2 -0.0013250014778070894 0.010191248536363242 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 1429 13264 AEEGPPLGAIP True H1975_Epitope_Rep2 1049.53932537101 1049.53822993586 56.149 2 -0.0013339677340113688 0.010191248536363242 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 94587 15349 RYKGPGFEYF True PC9_epitope_Rep2 1262.6084079903396 1262.60730993586 64.321 2 -0.001364614219181111 0.010191248536363242 0.9438714419765777 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 116505 17874 TYDRVESLF True PC9_epitope_Rep4 1128.54513902744 1128.5440499358601 76.791 2 -0.0013700039600073853 0.010191248536363242 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF'] 76824 24294 NVFFGSIWL True PC9_epitope_Rep5 1081.5596668927699 1081.55856993586 98.47 2 -0.001385864601477529 0.010191248536363242 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 35448 11697 GTEFGGSIY True H1975_Epitope_Rep2 929.4130622287298 929.4125149679301 50.067 1 -0.0014320457175647596 0.010191248536363242 0.9438714419765777 ['ENSG00000213585|ENST00000265333|VDAC1', 'ENST00000489906.5_1_5:133308464-133311792:-|nuORF', 'nc|ENSG00000165637|P45880-2|VDAC2', 'ENSG00000078668|ENST00000022615|VDAC3', 'nc|ENSG00000078668|Q9Y277-2|VDAC3', 'ENSG00000165637|ENST00000332211|VDAC2', 'nc|ENSG00000165637|P45880-1|VDAC2'] 8962 16564 AVGVLVAAT True PC9_epitope_Rep5 799.48035394291 799.47980496793 68.718 1 -0.001466181086921768 0.010191248536363242 0.9438714419765777 ['FCN2|p.G11V|1|0.18|ENSG00000160339|chr9:134880853-134880853|G/T|missense_variant'] 48780 8657 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 38.258 2 -0.001466684724088115 0.010191248536363242 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 101324 15990 SLYPGTETM True PC9_epitope_Rep2 997.44264810485 997.4415499358599 66.758 2 -0.001467339633061916 0.010191248536363242 0.9438714419765777 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL', 'nc|ENSG00000197321|O95425-2|SVIL'] 25805 15040 FGANAILGV True H1975_Epitope_Rep3 860.4756029156399 860.4750549679301 63.245 1 -0.0014696651443414062 0.010191248536363242 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 77035 13439 NVVNRLTSV True PC9_epitope_Rep1 1000.56654317836 1000.56544993586 56.553 2 -0.0014959848859266783 0.010191248536363242 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 90705 5005 RKNDENITL True NCI_RA007_Epitope_Rep4 1101.57783613805 1101.5767299358602 25.734 2 -0.0015118551804510628 0.010212710596500358 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2'] 53347 13003 KTSESSTILVV True PC9_epitope_Rep2 1162.64451871554 1162.64342993586 55.302 2 -0.0015456155914778354 0.010233727938944538 0.9438714419765777 ['ENSG00000203926|ENST00000370518|SPANXA2', 'ENSG00000198573|ENST00000358993|SPANXC', 'ENSG00000198021|ENST00000370519|SPANXA1', 'ENSG00000196406|ENST00000370515|SPANXD', 'ENSG00000227234|ENST00000449283|SPANXB1'] 118102 9818 VATVSLPR True PC9_epitope_Rep5 841.5021520166499 841.50104993586 42.732 2 -0.0015584633648009518 0.010233727938944538 0.9438714419765777 ['CON__P00761'] 9880 20016 AYNDNWFITF True NCI_RA007_Epitope_Rep3 1289.57168812845 1289.5705899358602 87.229 2 -0.0015773249230913236 0.010233727938944538 0.9438714419765777 ['ENSG00000107929|ENST00000316157|LARP4B', 'LARP4B|p.S572Lfs*24|1|0.11|ENSG00000107929|chr10:815015-815052|GGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCT/-|frameshift_variant'] 725 15606 AAVNVICEL True H1975_Epitope_Rep2 930.48445334718 930.48334993586 65.185 2 -0.0015945278462355093 0.010254520227203747 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1'] 106806 5256 SYGKQTNVL True NCI_RA007_Epitope_Rep3 1008.52400966004 1008.52290993586 27.678 2 -0.0016034365900932685 0.010254520227203747 0.9438714419765777 ['ENSG00000175336|ENST00000398189|APOF'] 109794 5118 THITAQTAV True PC9_epitope_Rep4 940.4977949122 940.49668993586 26.343 2 -0.0016120725897959861 0.010254520227203747 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2'] 25067 12613 FDEFLGIR True H1975_Epitope_Rep3 995.5076313199098 995.50652993586 53.722 2 -0.001655523640409047 0.010254520227203747 0.9438714419765777 ['ENSG00000188676|ENST00000502986|IDO2'] 128623 17174 VSLALALNGV True PC9_epitope_Rep6 955.57023157647 955.56912993586 78.648 2 -0.0016973988407236991 0.010274417999739887 0.9438714419765777 ['ENSG00000203805|ENST00000398250|PLPP4'] 92662 15941 RRGEYVLTF True PC9_epitope_Rep5 1139.60874234351 1139.60710490379 66.307 3 -0.0017094113623091626 0.010274417999739887 0.9438714419765777 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1', 'ENSG00000111252|ENST00000341259|SH2B3'] 8806 21969 AVFPDDMPTL True PC9_epitope_Rep3 1104.51614739828 1104.51557496793 89.804 1 -0.0017147413154507455 0.010274417999739887 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 22006 13792 ESPINVTTV True PC9_epitope_Rep1 958.49712620586 958.49602993586 57.896 2 -0.0017175789707362496 0.010274417999739887 0.9438714419765777 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 32507 7361 GGPGGFGPG True NCI_RA007_Epitope_Rep5 701.3132886178099 701.31274496793 34.994 1 -0.0017286663480196192 0.010274417999739887 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546'] 2644 12895 AESVLAVVA True H1975_Epitope_Rep1 857.4858332461699 857.48528496793 54.672 1 -0.001728948548653319 0.010274417999739887 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 98890 17412 SIWDYFIAK True NCI_RA007_Epitope_Rep3 1141.58079626017 1141.5796899358602 76.396 2 -0.0017393364316941945 0.010274417999739887 0.9438714419765777 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 101661 20278 SPFQFTVGP True PC9_epitope_Rep4 978.4810822188999 978.47998993586 86.142 2 -0.0017830871842820068 0.010274417999739887 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 75270 11737 NPNQYNYIA True PC9_epitope_Rep6 1095.49852318819 1095.49742993586 56.301 2 -0.0018406986121060728 0.010291632361225463 0.9438714419765777 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 107072 11482 SYLTSASSL True NCI_RA007_Epitope_Rep4 927.45492704071 927.4543749679301 51.1 1 -0.0018445480920947705 0.010291632361225463 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 101672 9988 SPFSGLQKA True PC9_epitope_Rep2 933.49198125577 933.49088993586 43.749 2 -0.0018451262582095582 0.010291632361225463 0.9438714419765777 ['ENSG00000137802|ENST00000457542|MAPKBP1', 'nc|ENSG00000137802|O60336|MAPKBP1', 'nc|ENSG00000137802|O60336-3|MAPKBP1', 'ENST00000505061.5_1_15:42111671-42117631:+|nuORF', 'nc|ENSG00000137802|O60336-4|MAPKBP1'] 570 11251 AARLPLDAA True PC9_epitope_Rep1 896.5079656730799 896.50686993586 48.156 2 -0.0018623281827131832 0.010291632361225463 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 79680 13530 PHLENVVL True PC9_epitope_Rep4 919.51271670035 919.51160993586 59.938 2 -0.0018682025243965522 0.010291632361225463 0.9438714419765777 ['ENST00000485726.1_1_7:103828364-103848439:-|nuORF', 'nc|ENSG00000164815|O43913-2|ORC5', 'ENSG00000164815|ENST00000297431|ORC5'] 70439 18864 LYRLKFNEF True PC9_epitope_Rep5 1228.6604435632 1228.65934993586 77.577 2 -0.0018717497157973854 0.010291632361225463 0.9438714419765777 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 53720 15588 KYEELFPAF True NCI_RA007_Epitope_Rep1 1142.5648118428596 1142.56370993586 64.721 2 -0.0018733956725689217 0.010291632361225463 0.9438714419765777 ['ENSG00000105402|ENST00000263354|NAPA'] 108605 8901 TEILKSVVA True H1975_Epitope_Rep3 958.5698972232999 958.56880993586 39.235 2 -0.001875594810680641 0.010291632361225463 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 101724 21260 SPGTALILLEA True PC9_epitope_Rep4 1083.61757569171 1083.61646993586 89.946 2 -0.0018815250576883556 0.010291632361225463 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 98684 15126 SIQQSQNALL True PC9_epitope_Rep1 1100.5825871653199 1100.5814899358602 63.002 2 -0.0018815868506665348 0.010291632361225463 0.9438714419765777 ['DOP1A|p.S1083Vfs*21|1|0.18|ENSG00000083097|chr6:83137286-83137288|CTA/TT|frameshift_variant', 'ENSG00000083097|ENST00000349129|DOP1A'] 95383 9740 SAIGLADPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43778993586 45.38 2 -0.0019093163004555776 0.010291632361225463 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 195 18432 AAFDGGFTV True PC9_epitope_Rep6 883.4075829254699 883.40703496793 83.542 1 -0.0019299606869140797 0.010291632361225463 0.9438714419765777 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2', 'ENST00000564259.1_1_16:48382051-48395504:+|nuORF'] 73260 7262 NEIDTTPPP True H1975_Epitope_Rep2 982.46074069714 982.4601949679301 32.868 1 -0.001965286990503227 0.010291632361225463 0.9438714419765777 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 73844 14516 NHEEEMLAL True PC9_epitope_Rep4 1084.4859098991599 1084.48480993586 63.752 2 -0.001977895714236103 0.010291632361225463 0.9438714419765777 ['ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'ENST00000414673.5_1_17:16734454-16736059:-|nuORF', 'CON__Q9Z2K1', 'CON__Q3ZAW8'] 71838 19941 MPFAGLISA True PC9_epitope_Rep6 905.46807500705 905.4675249679301 89.363 1 -0.0019806776573496744 0.010291632361225463 0.9438714419765777 ['ENST00000338244.5_1_20:4913325-4913352:-|nuORF'] 32634 13074 GHFPSPIRL True PC9_epitope_Rep4 1022.5661492555399 1022.56504993586 58.181 2 -0.0019808214426510744 0.010291632361225463 0.9438714419765777 ['ENSG00000062822|ENST00000440232|POLD1'] 106407 17143 SVTFVAEQV True PC9_epitope_Rep4 978.5022115862997 978.50110993586 73.945 2 -0.0019907466031356897 0.010291632361225463 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 75801 8277 NRAVVGVVA True PC9_epitope_Rep1 883.5239500903898 883.52284993586 36.67 2 -0.00199841518536416 0.010291632361225463 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 29275 7864 FVDKENLT True PC9_epitope_Rep5 964.48656152216 964.48546993586 35.192 2 -0.00200564649823046 0.010291632361225463 0.9438714419765777 ['ENSG00000171853|ENST00000324266|TRAPPC12', 'ENST00000482645.1_1_2:3383573-3392513:+|nuORF'] 35762 21126 GTVEQIVYL True PC9_epitope_Rep1 1020.5491617787197 1020.5485749679301 86.092 1 -0.0020119850274077223 0.010291632361225463 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 48613 8420 KEIEYVETVTS True H1975_Epitope_Rep2 1296.6449126383598 1296.6438099358602 37.339 2 -0.002031042421935468 0.010305037777922106 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 37070 17827 GVSGRIFTI True PC9_epitope_Rep5 948.53926580136 948.53816993586 73.591 2 -0.002079522849000143 0.010305037777922106 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 5926 11660 APHPPLSVV True PC9_epitope_Rep4 915.51780208079 915.51670993586 52.612 2 -0.0021213471872411093 0.010305037777922106 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 53385 7849 KVADGFKVV True PC9_epitope_Rep6 961.5596668927699 961.55856993586 39.59 2 -0.0021320897325367 0.010305037777922106 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 47916 21941 IYVPVSLGF True PC9_epitope_Rep4 993.55351888317 993.55297496793 92.606 1 -0.0021531801211672023 0.010305037777922106 0.9438714419765777 ['ENSG00000172818|ENST00000335987|OVOL1'] 89797 7150 RFEEKHAYF True PC9_epitope_Rep2 1225.5880068989297 1225.58635490379 32.896 3 -0.002154812052744829 0.010305037777922106 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 96441 4403 SEIKMEQA True NCI_RA007_Epitope_Rep3 934.4429824580199 934.44188993586 24.098 2 -0.0021595606167526668 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 63131 8775 LNQDQLDAVSK True PC9_epitope_Rep2 1229.62518025329 1229.6240899358602 39.108 2 -0.0021719100660053856 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 48412 15172 KEDPFVFIP True H1975_Epitope_Rep1 1090.5698972233 1090.5688099358601 63.619 2 -0.0021731083248800087 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 90404 19111 RIMGNIWDA True PC9_epitope_Rep3 1074.5280494946599 1074.52694993586 78.734 2 -0.0021848929795947785 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000113569|O75694-2|NUP155', 'ENSG00000113569|ENST00000231498|NUP155'] 117234 10935 TYVSGTLRF True NCI_RA007_Epitope_Rep4 1042.54474510462 1042.54364993586 48.922 2 -0.002200452439045991 0.010305037777922106 0.9438714419765777 ['ENSG00000134255|ENST00000357172|CEPT1'] 46804 23931 IVDPFQILV True PC9_epitope_Rep1 1042.60628273202 1042.6051899358602 96.853 2 -0.002200967898608207 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000144034|Q9Y3C4-2|TPRKB', 'ENST00000489476.5_1_2:73956300-73964431:-|nuORF', 'ENST00000470012.1_1_2:73959253-73964442:-|nuORF', 'ENST00000497464.5_1_2:73957656-73964442:-|nuORF', 'ENST00000463231.5_1_2:73956300-73964442:-|nuORF', 'ENSG00000144034|ENST00000272424|TPRKB', 'nc|ENSG00000144034|Q9Y3C4-3|TPRKB'] 75803 8260 NRAVVGVVA True PC9_epitope_Rep5 883.5239500903898 883.52284993586 36.713 2 -0.0022082870522434983 0.010305037777922106 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 82995 21065 PYFNAPVYL True PC9_epitope_Rep4 1082.5436824754597 1082.5431749679299 89.185 1 -0.0022430334864020378 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 135279 15904 YAYTGVLQL True H1975_Epitope_Rep1 1026.53859709502 1026.53750993586 66.485 2 -0.002245712648739739 0.010305037777922106 0.9438714419765777 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4', 'KLHL4|p.Q238H|1|0.86|ENSG00000102271|chrX:87614557-87614557|G/T|missense_variant'] 9794 8813 AYLHTTTTF True NCI_RA007_Epitope_Rep5 1053.51311062317 1053.51200993586 40.564 2 -0.002249220267284238 0.010305037777922106 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 98628 20130 SIPEGALVAV True PC9_epitope_Rep1 954.5385970950199 954.53750993586 82.26 2 -0.002274749165829214 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant'] 36808 21540 GVPQALFGV True PC9_epitope_Rep1 886.4912529797799 886.49014993586 87.677 2 -0.0022794929860936886 0.010305037777922106 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 78206 7406 PAPPPPPPP True PC9_epitope_Rep6 865.46978925921 865.46868993586 37.706 2 -0.002286357823641333 0.010305037777922106 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 77539 21541 NYQVQFVTL True PC9_epitope_Rep5 1110.57095985246 1110.5698699358602 87.893 2 -0.0023122666599386787 0.010305037777922106 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 132413 10752 VYNKVHITL True PC9_epitope_Rep2 1085.62332977849 1085.62222993586 46.676 2 -0.0023620297928108303 0.010305037777922106 0.9438714419765777 ['ENSG00000166228|ENST00000299299|PCBD1', 'ENST00000493228.1_1_10:72643709-72647885:-|nuORF'] 6138 19616 APNPVVFVA True PC9_epitope_Rep2 912.5069030439199 912.5063549679301 80.839 1 -0.0023840675499514153 0.010305037777922106 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 126290 8444 VPHQPFSQA True PC9_epitope_Rep5 1009.4981292653698 1009.49702993586 37.423 2 -0.002384509877011467 0.010305037777922106 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 31539 13600 GEFGGFGSV True NCI_RA007_Epitope_Rep5 855.3762827971899 855.37518993586 59.0 2 -0.002392209991580139 0.010305037777922106 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 114243 13883 TRYIAPTVL True PC9_epitope_Rep4 1032.5967806774797 1032.59568993586 61.301 2 -0.0023959066142156624 0.010305037777922106 0.9438714419765777 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000472059.5_1_17:19558694-19578882:+|nuORF', 'ENST00000476965.5_1_17:19559657-19578882:+|nuORF'] 47715 21407 IYPWVHVVI True PC9_epitope_Rep5 1124.6382515666398 1124.6371499358602 87.406 2 -0.0024075642899597373 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3'] 126813 6450 VPSSPLRAA True PC9_epitope_Rep6 896.50796567308 896.50686993586 33.441 2 -0.0024559615207785253 0.010305037777922106 0.9438714419765777 ['ENST00000372409.7_1_20:44563346-44566100:+|nuORF'] 103354 15165 SQVFKLYTA True PC9_epitope_Rep2 1055.56514619603 1055.56404993586 63.59 2 -0.002474020532736733 0.010305037777922106 0.9438714419765777 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-2|ANAPC5', 'ENST00000534976.5_1_12:121766230-121783868:-|nuORF', 'ENST00000541652.5_1_12:121773337-121785669:-|nuORF'] 106591 9071 SVYSDIVGK True NCI_RA007_Epitope_Rep4 966.5022115862998 966.50110993586 41.724 2 -0.002474132224990234 0.010305037777922106 0.9438714419765777 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 19573 6896 ELREALTTG True H1975_Epitope_Rep3 988.5189242795999 988.51782993586 31.484 2 -0.0024806051155892737 0.010305037777922106 0.9438714419765777 ['ENSG00000125731|ENST00000245908|SH2D3A', 'nc|ENSG00000125731|Q9BRG2-2|SH2D3A'] 6374 7732 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49492993586 34.682 2 -0.002489441620415042 0.010305037777922106 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 126693 5490 VPRPETAVA True PC9_epitope_Rep4 938.5185303567798 938.51742993586 27.877 2 -0.0025009937373570977 0.010305037777922106 0.9438714419765777 ['ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 112674 22242 TPFTGPFISV True PC9_epitope_Rep3 1064.55424715916 1064.5531499358601 90.84 2 -0.0025187813153047934 0.010305037777922106 0.9438714419765777 ['ENSG00000164142|ENST00000435205|FHIP1A'] 65586 12523 LSGHLETVILG True NCI_RA007_Epitope_Rep2 1137.63937376545 1137.63826993586 53.325 2 -0.002520637006257521 0.010305037777922106 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 44863 21514 IQAGLLSAL True PC9_epitope_Rep2 884.53311779176 884.53202993586 88.221 2 -0.0025258028882552746 0.010305037777922106 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 48485 5713 KEFDGKSLVS True NCI_RA007_Epitope_Rep5 1108.5764391557198 1108.57534993586 28.662 2 -0.0025495960274072678 0.010305037777922106 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000517330.1_1_5:77337712-77337985:-|nuORF', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 13874 14073 DRDGGFVL True PC9_epitope_Rep6 877.4293809992099 877.42828993586 66.003 2 -0.002557932060701667 0.010305037777922106 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 90549 10806 RKFLETVEL True NCI_RA007_Epitope_Rep4 1133.6444591458899 1133.6433699358602 48.412 2 -0.002629464201000625 0.010346096404839722 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000467020.5_1_6:35436211-35436817:+|nuORF'] 76944 16804 NVPDSFNEV True PC9_epitope_Rep5 1019.45598966987 1019.45488993586 69.644 2 -0.002651867815685254 0.010346096404839722 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 95190 7666 SAAHAIVSV True PC9_epitope_Rep4 853.46576650793 853.46466993586 36.869 2 -0.0026605849310942877 0.010346096404839722 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 95406 20111 SAISMGIVSV True PC9_epitope_Rep4 962.5106680950199 962.50956993586 85.491 2 -0.0026648660740867343 0.010346096404839722 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 133011 10467 VYVQHPITF True NCI_RA007_Epitope_Rep5 1102.5811306133398 1102.58002993586 46.893 2 -0.0026739548690459503 0.010346096404839722 0.9438714419765777 ['ENSG00000189067|ENST00000622633|LITAF', 'nc|ENSG00000189067|Q99732-3|LITAF', 'nc|ENSG00000189067|Q99732-2|LITAF'] 35743 4947 GTTHNFLYK True NCI_RA007_Epitope_Rep5 1079.5399940773498 1079.5388899358602 25.729 2 -0.002698667684411491 0.010346096404839722 0.9438714419765777 ['ENST00000599239.5_1_19:48565437-48599986:-|nuORF', 'ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'PLA2G4C|p.I518Sfs*2|1|0.08|ENSG00000105499|chr19:48053015-48053024|TCTCTAAGGA/-|frameshift_variant', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C'] 28061 13241 FRDHLEEVL True PC9_epitope_Rep4 1156.58767254576 1156.58602490379 58.828 3 -0.0027528757785998128 0.010346096404839722 0.9438714419765777 ['ENSG00000096433|ENST00000605930|ITPR3'] 19966 14785 EMDSPILGDY True H1975_Epitope_Rep3 1138.4852411928198 1138.48467496793 62.25 1 -0.002774979872038494 0.010346096404839722 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 120598 11825 VGAGAPVYLAA True H1975_Epitope_Rep1 987.5389314481899 987.53782993586 50.48 2 -0.0027905482631046153 0.010346096404839722 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF'] 104647 14858 SSYMHFTNV True PC9_epitope_Rep5 1084.46478053176 1084.4636899358602 62.153 2 -0.002797768685977749 0.010346096404839722 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 32096 8694 GEYGFQNA True H1975_Epitope_Rep3 884.36644638948 884.36534993586 38.441 2 -0.0028111422095684043 0.010367292167175291 0.9438714419765777 ['CON__P02769'] 107755 17584 TAMDQVFHV True PC9_epitope_Rep4 1046.4855159763401 1046.4844099358602 75.652 2 -0.002812167710642496 0.010367292167175291 0.9438714419765777 ['ENSG00000145012|ENST00000617246|LPP'] 2704 4050 AETKPPM[Oxidation]AP True H1975_Epitope_Rep3 956.4637182830398 956.46262993586 20.707 2 -0.002818299231659292 0.010388486094578509 0.9438714419765777 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 136312 6836 YGYGHESEL True H1975_Epitope_Rep3 1053.44033960573 1053.43924993586 31.25 2 -0.0028253007084325507 0.010388486094578509 0.9438714419765777 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 94770 17256 RYLPKGFLNQF True PC9_epitope_Rep6 1381.7506555499297 1381.7495499358602 78.974 2 -0.0028280568194631235 0.010409903475739082 0.9438714419765777 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 5670 22059 APALLLIPAA True PC9_epitope_Rep2 948.60080342876 948.59970993586 90.322 2 -0.0028962648362458655 0.0104299655940969 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 25521 7623 FEQEMATAA True NCI_RA007_Epitope_Rep5 996.4222470134398 996.42114993586 36.02 2 -0.0029355117927212858 0.0104299655940969 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 96030 10215 SEALPSDIAA True H1975_Epitope_Rep2 972.47639076128 972.47528993586 44.297 2 -0.0029395748438520363 0.0104299655940969 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 116546 15466 TYFDKNYNL True PC9_epitope_Rep2 1176.5451390274397 1176.5440499358601 64.767 2 -0.0029423133761536727 0.0104299655940969 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 44698 15864 IPNPAQTSVVV True PC9_epitope_Rep6 1123.62372370131 1123.62262993586 73.294 2 -0.0029758631643498623 0.0104299655940969 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 60517 21107 LIPDIDLKL True PC9_epitope_Rep1 1038.63249747986 1038.6314099358601 86.016 2 -0.0030019365973248295 0.0104299655940969 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 114437 7811 TSDYVSQSY True H1975_Epitope_Rep2 1048.43491987212 1048.43382993586 34.992 2 -0.003006094963737902 0.0104299655940969 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 32632 16502 GHFNSMVAL True PC9_epitope_Rep5 974.4643866089399 974.46328993586 68.473 2 -0.0030158942703042177 0.010447761194029851 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45539071-45541135:+|nuORF'] 99096 12716 SLAEGLRTV True PC9_epitope_Rep3 944.52909504048 944.52798993586 53.934 2 -0.003029580403777895 0.010447761194029851 0.9438714419765777 ['ENSG00000111331|ENST00000228928|OAS3'] 85807 3913 QLYWSHPRK True NCI_RA007_Epitope_Rep3 1213.6356257976897 1213.63399490379 21.701 3 -0.003030895671600517 0.010447761194029851 0.9438714419765777 ['ENSG00000213741|ENST00000245458|RPS29', 'ENST00000557367.2_1_14:50053001-50053064:-|nuORF', 'nc|ENSG00000213741|P62273-2|RPS29', 'ENST00000554075.1_1_14:50052568-50053064:-|nuORF'] 36428 21786 GVIGGGVFQAI True PC9_epitope_Rep3 1016.5654805491998 1016.56438993586 89.098 2 -0.00307818682909165 0.010447761194029851 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 75498 17392 NQIPTVNNL True PC9_epitope_Rep3 1011.5349086969101 1011.53380993586 72.068 2 -0.003095895586129351 0.010447761194029851 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 30646 10348 GALETIWR True H1975_Epitope_Rep3 944.5079656730799 944.50686993586 44.857 2 -0.0031087848488335883 0.010447761194029851 0.9438714419765777 ['ENSG00000162461|ENST00000294454|SLC25A34'] 6376 7915 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49492993586 35.386 2 -0.003110661112794109 0.010447761194029851 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 113133 10520 TQAPGNPVL True PC9_epitope_Rep6 895.4763311916299 895.4752299358599 51.253 2 -0.003153451255982329 0.010447761194029851 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 67809 21960 LTIDDGIFEV True PC9_epitope_Rep4 1120.56520576568 1120.5641099358602 92.683 2 -0.003164658989672002 0.010447761194029851 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 102627 22362 SQDAGIWYL True PC9_epitope_Rep1 1051.49746055903 1051.49687496793 90.832 1 -0.0032072956773717774 0.010447761194029851 0.9438714419765777 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 27744 11344 FQDRPVSSL True PC9_epitope_Rep3 1047.53490869691 1047.53380993586 48.639 2 -0.0032143155073586322 0.010447761194029851 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 138083 6301 YQEGAKMAV True PC9_epitope_Rep4 995.4746169394698 995.47350993586 31.298 2 -0.0032155406313830767 0.010447761194029851 0.9438714419765777 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'JUP-LEPREL4|1|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 89105 5550 REFDRRFSP True NCI_RA007_Epitope_Rep4 1208.6050539453997 1208.60341490379 27.945 3 -0.0032283216689893 0.010447761194029851 0.9438714419765777 ['ENST00000472898.5_1_1:155981561-155990687:-|nuORF', 'ENSG00000163479|ENST00000295702|SSR2', 'ENST00000532074.5_1_1:155979333-155988136:-|nuORF', 'ENST00000484320.6_1_1:155979333-155988008:-|nuORF', 'ENST00000368311.5_1_1:155981561-155981702:-|nuORF', 'ENST00000472467.1_1_1:155979333-155981702:-|nuORF', 'ENST00000496742.5_1_1:155979333-155990718:-|nuORF'] 97040 12586 SEWLIRPP True NCI_RA007_Epitope_Rep5 996.5392658013599 996.53816993586 55.066 2 -0.003231063060422893 0.010447761194029851 0.9438714419765777 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 75621 11046 NQSDTSVSL True PC9_epitope_Rep1 949.43525422529 949.43414993586 47.377 2 -0.003233045981328536 0.010447761194029851 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 94812 14041 RYLTVAAVF True NCI_RA007_Epitope_Rep2 1038.5862159937797 1038.5851099358601 59.274 2 -0.0032434504680565264 0.010447761194029851 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENST00000454403.1_1_13:41958968-41959286:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 131795 11084 VYANGIRNI True PC9_epitope_Rep1 1018.5559784946599 1018.55488993586 47.522 2 -0.0032595014788817083 0.010447761194029851 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 71816 22119 MPAFPLPYA True PC9_epitope_Rep2 1005.4993751353298 1005.49826993586 90.557 2 -0.003277763326366749 0.01046871282417321 0.9438714419765777 ['ENSG00000185359|ENST00000329138|HGS', 'ENST00000570355.1_1_17:79663642-79664026:+|nuORF', 'ENST00000571647.1_1_17:79663564-79664029:+|nuORF'] 52328 7486 KPAVNQIEC True PC9_epitope_Rep5 1000.5011660404799 1000.50006993586 33.745 2 -0.0032854104433492617 0.01046871282417321 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF'] 58254 9721 LETAEEAVT True H1975_Epitope_Rep2 961.4604063439699 961.45985496793 42.378 1 -0.003298478677662459 0.01046871282417321 0.9438714419765777 ['ENSG00000225190|ENST00000430334|PLEKHM1', 'ENST00000582201.5_1_17:62781409-62811241:-|nuORF', 'ENST00000582035.1_1_17:43530658-43531768:-|nuORF'] 105294 15398 STTNGGILTV True PC9_epitope_Rep4 961.50802524273 961.50692993586 67.161 2 -0.003340292670860883 0.010489888612522981 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 38891 17047 HIIGGVIAV True PC9_epitope_Rep2 877.53853752537 877.53744993586 70.824 2 -0.003347650360852213 0.010489888612522981 0.9438714419765777 ['ENST00000550528.5_1_12:58133675-58140075:+|nuORF', 'ENST00000546993.5_1_12:58138937-58140584:+|nuORF', 'ENSG00000135452|ENST00000257910|TSPAN31'] 41075 12014 HYLDTTTLI True NCI_RA007_Epitope_Rep5 1075.55497543515 1075.5538699358601 52.871 2 -0.00339320888860622 0.010511062568938296 0.9438714419765777 ['ENSG00000099942|ENST00000354336|CRKL', 'ENSG00000167193|ENST00000300574|CRK', 'nc|ENSG00000167193|P46108-2|CRK'] 48488 5843 KEFEGKTLV True NCI_RA007_Epitope_Rep4 1049.57571087973 1049.57460993586 29.1 2 -0.003397961394727445 0.010511062568938296 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 95566 6429 SASGPLHSV True PC9_epitope_Rep1 853.4293809992101 853.42883496793 29.535 1 -0.003406072507510109 0.010526998400415027 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 40369 4140 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 22.251 3 -0.003412525427657427 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 812 5047 ADALESPASP True H1975_Epitope_Rep2 956.445090633 956.44454496793 24.495 1 -0.0034158499533152595 0.010526998400415027 0.9438714419765777 ['ENSG00000147324|ENST00000276282|MFHAS1'] 67358 6537 LTDRGVM[Oxidation]SY True H1975_Epitope_Rep3 1056.49099566004 1056.4898899358602 30.113 2 -0.0034179877840422573 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000126456|Q14653-4|IRF3', 'ENSG00000126456|ENST00000377139|IRF3', 'ENST00000602190.1_1_19:50164877-50165571:-|nuORF'] 36057 15920 GVDVTLPRV True PC9_epitope_Rep4 954.5498304850599 954.54872993586 69.163 2 -0.0034306724288059786 0.010526998400415027 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 87582 14092 QTPQRLLEV True PC9_epitope_Rep3 1082.6084079903399 1082.60730993586 59.289 2 -0.00343285320671902 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 116967 16205 TYPKIWVKV True PC9_epitope_Rep5 1132.66446631448 1132.6633699358601 67.323 2 -0.0034362766172638362 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 108906 7168 TESQANVVV True H1975_Epitope_Rep2 945.4767251144499 945.47562993586 32.505 2 -0.0034512657774736786 0.010526998400415027 0.9438714419765777 ['ENSG00000100219|ENST00000344347|XBP1'] 46378 11551 ITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep1 1118.5277749905702 1118.5266699358601 48.9 2 -0.0034723144628462225 0.010526998400415027 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 105671 6847 SVFYGAPSK True NCI_RA007_Epitope_Rep4 954.4810822188998 954.47998993586 32.958 2 -0.003484120611972947 0.010526998400415027 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'ENST00000468936.5_1_6:31999682-32002424:+|nuORF', 'ENST00000496560.1_1_6:32001776-32002287:+|nuORF', 'ENST00000468237.5_1_6:32001530-32003051:+|nuORF'] 29152 8565 FTVGEGIR True NCI_RA007_Epitope_Rep1 877.4657665079299 877.46466993586 37.318 2 -0.0034936214235507792 0.010526998400415027 0.9438714419765777 ['ENSG00000205038|ENST00000378402|PKHD1L1', 'PKHD1L1|p.G3595Efs*3|1|0.42|ENSG00000205038|chr8:109498726-109498726|G/-|frameshift_variant', 'PKHD1L1|p.S3970Mfs*9|1|0.26|ENSG00000205038|chr8:109518386-109518386|G/-|frameshift_variant'] 32127 6945 GEYSGIEHV True NCI_RA007_Epitope_Rep4 989.44542498617 989.44432993586 33.339 2 -0.003503531780411697 0.010526998400415027 0.9438714419765777 ['ENST00000558509.5_1_15:78453927-78455839:+|nuORF', 'ENST00000559889.5_1_15:78449787-78454580:+|nuORF', 'nc|ENSG00000166411|P50213-2|IDH3A', 'ENSG00000166411|ENST00000299518|IDH3A'] 116540 11239 TYETKTALL True PC9_epitope_Rep2 1038.5597264624198 1038.5586299358602 48.557 2 -0.0035091203002613775 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 87428 11730 QTEEDYTLTM[Oxidation]Y True H1975_Epitope_Rep2 1408.5704277492 1408.5693299358602 50.192 2 -0.0035351041276304664 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000166206|P28472-3|GABRB3'] 32009 6814 GETSVPPPP True H1975_Epitope_Rep2 879.4337976733099 879.43324496793 31.129 1 -0.0035698871704248343 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 104256 16042 SSDSTFLVL True NCI_RA007_Epitope_Rep3 967.4862271689899 967.48512993586 70.788 2 -0.003571290846407061 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF'] 17489 9891 EHGPNPIL True PC9_epitope_Rep5 875.45011644379 875.44900993586 43.016 2 -0.0036122388572009233 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 64054 11980 LQDPNHLTL True PC9_epitope_Rep6 1049.55055876105 1049.54946993586 57.351 2 -0.003619367036700502 0.010526998400415027 0.9438714419765777 ['KCTD21|p.H177R|1|0.41|ENSG00000188997|chr11:78174025-78174025|T/C|missense_variant', 'ENSG00000188997|ENST00000340067|KCTD21'] 72390 7610 MTEGSTVNTEY True H1975_Epitope_Rep3 1230.50743318938 1230.50687496793 34.253 1 -0.0036402060617088433 0.010526998400415027 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 3809 16367 AGVNKSYLYL True PC9_epitope_Rep3 1126.60225998074 1126.60116993586 68.093 2 -0.0036454461727321616 0.010526998400415027 0.9438714419765777 ['ENST00000522364.5_1_8:80963727-80992703:-|nuORF', 'nc|ENSG00000076554|P55327|TPD52', 'nc|ENSG00000076554|P55327-7|TPD52', 'nc|ENSG00000076554|P55327-5|TPD52', 'nc|ENSG00000076554|P55327-6|TPD52', 'nc|ENSG00000076554|P55327-8|TPD52'] 17623 7631 EHNIFHNEV True PC9_epitope_Rep2 1137.5203212619301 1137.51868490379 34.723 3 -0.00364593297114087 0.010526998400415027 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 75382 22309 NQDNLQLFL True PC9_epitope_Rep1 1103.5611234447501 1103.56002993586 90.623 2 -0.0036472780896093355 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'NDRG3|p.G292Dfs*5|1|0.18|ENSG00000101079|chr20:36656516-36656516|C/-|frameshift_variant', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 47491 14465 IYKQDLPSL True PC9_epitope_Rep4 1075.5913609438699 1075.59026993586 63.551 2 -0.0036568792188761768 0.010526998400415027 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 132197 18100 VYKAFVMETF True PC9_epitope_Rep6 1233.6103821362897 1233.60928993586 82.257 2 -0.0036612213316947525 0.010526998400415027 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36037622-36038346:+|nuORF'] 34636 12377 GQIQEAIAL True NCI_RA007_Epitope_Rep3 941.5181960036098 941.51708993586 55.882 2 -0.0037125105630198786 0.010526998400415027 0.9438714419765777 ['ENSG00000101193|ENST00000266069|GID8'] 76645 22907 NTIEHLLPLFL True PC9_epitope_Rep2 1308.7441731871597 1308.7430699358601 93.618 2 -0.0037286075204151854 0.010544739514682686 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF'] 29 4462 AAAAPLGAR True PC9_epitope_Rep3 796.4555361774 796.45442993586 22.259 2 -0.003746223199594742 0.010544739514682686 0.9438714419765777 ['ENST00000426838.8_1_18:42260239-42281192:+|nuORF'] 72032 18350 MQNKSVFIL True PC9_epitope_Rep1 1078.58450174162 1078.5834099358601 75.372 2 -0.0037549610567790344 0.010544739514682686 0.9438714419765777 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2', 'nc|ENSG00000109854|Q9BUP3-2|HTATIP2'] 86658 13339 QRGPPIIL True PC9_epitope_Rep4 892.5494365622399 892.54832993586 59.208 2 -0.003781091212677792 0.010544739514682686 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 74116 12029 NHVTPPNVSL True PC9_epitope_Rep2 1076.56145779792 1076.56087496793 51.586 1 -0.003782528654087496 0.010544739514682686 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 52737 6920 KQLEVVHTL True NCI_RA007_Epitope_Rep4 1065.6182443980501 1065.6171499358602 33.237 2 -0.0037957038385993723 0.010544739514682686 0.9438714419765777 ['nc|ENSG00000014123|O94874-3|UFL1', 'ENSG00000014123|ENST00000369278|UFL1'] 32068 5521 GEVTNVTTA True NCI_RA007_Epitope_Rep5 890.4345259493 890.43342993586 27.923 2 -0.0037989704264183234 0.010544739514682686 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 4116 7283 AHTAEVNCL True PC9_epitope_Rep4 956.43856578392 956.43746993586 35.329 2 -0.0038158882386894635 0.010544739514682686 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 70330 8870 LYPPRQPTF True NCI_RA007_Epitope_Rep3 1117.59202965021 1117.59092993586 41.981 2 -0.0038159933657160405 0.010544739514682686 0.9438714419765777 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 60571 17995 LIRGESLII True PC9_epitope_Rep4 1012.62808080576 1012.62698993586 77.275 2 -0.0038311797743554726 0.010544739514682686 0.9438714419765777 ['ENSG00000162753|ENST00000367714|SLC9C2'] 118823 5776 VEEGAPPPP True H1975_Epitope_Rep3 891.4337976733099 891.43270993586 27.243 2 -0.0038421556750252855 0.010544739514682686 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 32631 16600 GHFNSMVAL True PC9_epitope_Rep1 974.4643866089399 974.46328993586 68.676 2 -0.0038675174687307187 0.010544739514682686 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45539071-45541135:+|nuORF'] 16261 9541 EEIAETLAS True H1975_Epitope_Rep2 961.4604063439699 961.45930993586 41.671 2 -0.0038794515592014854 0.010544739514682686 0.9438714419765777 ['ENSG00000122188|ENST00000442561|LAX1', 'nc|ENSG00000122188|Q8IWV1-3|LAX1', 'nc|ENSG00000122188|Q8IWV1-2|LAX1'] 38057 8594 HELPTATQKL True PC9_epitope_Rep4 1136.6189726740402 1136.61733490379 40.536 3 -0.003921817229398957 0.010544739514682686 0.9438714419765777 ['nc|ENSG00000162869|Q6ZMI0-5|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-2|PPP1R21', 'ENSG00000162869|ENST00000294952|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-3|PPP1R21'] 8366 18365 ATMPVVPSV True PC9_epitope_Rep4 899.4786396907499 899.47754993586 78.707 2 -0.003922046945135737 0.010544739514682686 0.9438714419765777 ['ENSG00000148341|ENST00000372564|SH3GLB2', 'nc|ENSG00000148341|Q9NR46-2|SH3GLB2', 'ENST00000479237.5_1_9:131770965-131773053:-|nuORF', 'ENST00000461811.5_1_9:131770965-131772716:-|nuORF'] 57763 4878 LENSTRENLEK True H1975_Epitope_Rep3 1331.6681076944299 1331.66647490379 23.889 3 -0.003953340888229446 0.010544739514682686 0.9438714419765777 ['CLMN|p.K654Sfs*91|1|0.27|ENSG00000165959|chr14:95203388-95203388|T/-|frameshift_variant', 'ENST00000556454.1_1_14:95660863-95677170:-|nuORF', 'ENSG00000165959|ENST00000298912|CLMN', 'CLMN|p.K423Rfs*35|1|0.24|ENSG00000165959|chr14:95204081-95204081|T/-|frameshift_variant', 'CLMN|p.L495Ffs*8|1|0.37|ENSG00000165959|chr14:95203864-95203865|-/A|frameshift_variant'] 105022 5895 STIKEVAQA True PC9_epitope_Rep3 945.5131106231698 945.51200993586 27.738 2 -0.003969763906947915 0.010544739514682686 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 5694 21286 APAPVFFVT True PC9_epitope_Rep2 947.5116540711899 947.51054993586 87.34 2 -0.004000858364463491 0.0105654343927576 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'nc|ENSG00000108846|O15438-5|ABCC3', 'nc|ENSG00000108846|O15438-3|ABCC3'] 6556 16065 APVPGIPTA True PC9_epitope_Rep5 821.46470387877 821.46360993586 66.782 2 -0.004016061741827781 0.0105654343927576 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 84326 12558 QFPGNSVAP True PC9_epitope_Rep1 915.4450310633499 915.44392993586 53.174 2 -0.004019500080585354 0.0105654343927576 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 38484 5947 HHAQDYGGL True PC9_epitope_Rep1 996.44134266524 996.44024993586 27.689 2 -0.004024147810038643 0.0105654343927576 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2'] 80635 18319 PLPPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 75.253 2 -0.004063055113801051 0.010584982286356175 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 580 9393 AARLPLDAA True PC9_epitope_Rep6 896.5079656730799 896.50686993586 46.331 2 -0.00406569390906383 0.010584982286356175 0.9438714419765777 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000459927.5_1_7:23286476-23287379:+|nuORF', 'ENST00000474157.1_1_7:23286476-23286758:+|nuORF', 'ENST00000487890.5_1_7:23286476-23290466:+|nuORF'] 126874 14974 VPTNIIAA True PC9_epitope_Rep5 797.4647038787699 797.46360993586 62.601 2 -0.004078718470116914 0.010584982286356175 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 5340 17287 ALSSALLS True PC9_epitope_Rep2 760.4330693973201 760.43252496793 71.753 1 -0.004111431999852346 0.010584982286356175 0.9438714419765777 ['ENST00000373095.5_1_9:130703347-130703578:-|nuORF'] 36844 14847 GVPTKVFNV True PC9_epitope_Rep1 959.5440168286299 959.54290993586 61.928 2 -0.004118869499494384 0.010584982286356175 0.9438714419765777 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3'] 102249 11944 SPTGGFVDA True PC9_epitope_Rep2 849.3868474808899 849.3862949679301 51.266 1 -0.004142527512192401 0.010584982286356175 0.9438714419765777 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 14336 7968 DTDPSIYR True H1975_Epitope_Rep3 965.4454249861699 965.44432993586 35.62 2 -0.0041475203101658895 0.010584982286356175 0.9438714419765777 ['nc|ENSG00000196364|A6NIE9|PRSS29P'] 43529 12319 IIDNNDTQL True PC9_epitope_Rep2 1044.50875351872 1044.5076499358602 52.697 2 -0.004158613777103558 0.010584982286356175 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 6422 13092 APSGNFVAC True PC9_epitope_Rep5 864.37998827864 864.37888993586 55.362 2 -0.004161995588373196 0.010584982286356175 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 1271 9300 AEDPVSEVP True H1975_Epitope_Rep1 941.43419159613 941.43308993586 40.681 2 -0.00421194579822576 0.010603835521769177 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 8533 18600 ATWLALNV True PC9_epitope_Rep6 886.4912529797799 886.49014993586 84.188 2 -0.004234482928433783 0.010603835521769177 0.9438714419765777 ['ENST00000538588.2_1_7:99821243-99844125:-|nuORF', 'nc|ENSG00000291122|Q8NAP1|CASTOR3P', 'ENSG00000274070|ENST00000616305|CASTOR2'] 1289 7372 AEDSPAIGP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 33.334 1 -0.004235703912801674 0.010603835521769177 0.9438714419765777 ['ENSG00000012174|ENST00000379484|MBTPS2'] 63909 17748 LPVWLENHTA True PC9_epitope_Rep2 1178.60840799034 1178.60730993586 73.55 2 -0.0042402099216917255 0.010603835521769177 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 71029 13325 MESPFITSP True H1975_Epitope_Rep3 1007.46338354943 1007.46228993586 56.515 2 -0.004263018415300684 0.010603835521769177 0.9438714419765777 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 100845 12782 SLSDIEIY True H1975_Epitope_Rep3 938.4596780679799 938.45912496793 54.382 1 -0.0042747510516269 0.010603835521769177 0.9438714419765777 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 115572 8324 TVIAKVNNV True PC9_epitope_Rep5 956.5654805492 956.56438993586 36.959 2 -0.0042775147283891845 0.010603835521769177 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 80644 18429 PLPPLPPPP True PC9_epitope_Rep5 923.5480395799099 923.54694993586 75.907 2 -0.004303535482260293 0.010603835521769177 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 95189 8048 SAAHAIVSV True PC9_epitope_Rep2 853.46576650793 853.46466993586 36.317 2 -0.004331349450238406 0.010603835521769177 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 104822 10342 STDWHVVNY True H1975_Epitope_Rep3 1119.49852318819 1119.49742993586 44.833 2 -0.004339941322144454 0.010603835521769177 0.9438714419765777 ['ENSG00000147251|ENST00000276202|DOCK11'] 78299 4957 PASGPIRPIVR True NCI_RA007_Epitope_Rep5 1161.6982260542497 1161.6965849037902 25.768 3 -0.004347983880024506 0.010603835521769177 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF'] 35694 5860 GTQPGPLLK True NCI_RA007_Epitope_Rep4 909.5283667644899 909.52726993586 29.163 2 -0.004348001234108986 0.010603835521769177 0.9438714419765777 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF', 'nc|ENSG00000123243|Q86UX2-3|ITIH5', 'ENST00000492668.5_1_10:7611547-7618533:-|nuORF', 'nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 107200 18836 SYPDLLPTF True NCI_RA007_Epitope_Rep5 1051.52261267771 1051.5215099358602 79.297 2 -0.004364893911445344 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 47698 19072 IYPVDLGDKF True PC9_epitope_Rep4 1165.6019256275697 1165.60082993586 81.451 2 -0.004391550933970771 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000163882|P52434-5|POLR2H', 'nc|ENSG00000163882|P52434-3|POLR2H', 'nc|ENSG00000163882|P52434-2|POLR2H', 'ENSG00000163882|ENST00000456318|POLR2H', 'nc|ENSG00000163882|P52434-4|POLR2H'] 113544 12944 TQVGTVTSL True PC9_epitope_Rep4 904.48656152216 904.48546993586 57.676 2 -0.004412873964253122 0.010619698245159619 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000482301.1_1_3:49714104-49717481:+|nuORF'] 116581 13808 TYGEIFEKF True NCI_RA007_Epitope_Rep5 1132.54407639828 1132.5429699358601 59.787 2 -0.004436001373561235 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 113415 7746 TQLQTTQSV True PC9_epitope_Rep2 1004.5138388991599 1004.51274993586 35.17 2 -0.00443728486516251 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.E636Q|2|0.14|ENSG00000143569|chr1:154254887-154254887|G/C|missense_variant'] 6557 14192 APVPGIPTA True PC9_epitope_Rep6 821.46470387877 821.46360993586 66.473 2 -0.004451582953397881 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 34480 8253 GQDGQLKGF True PC9_epitope_Rep2 948.4664947839199 948.46538993586 37.103 2 -0.0044677160862723 0.010619698245159619 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 118094 9709 VATVSLPR True PC9_epitope_Rep3 841.5021520166499 841.50104993586 42.3 2 -0.0044740472452163066 0.010619698245159619 0.9438714419765777 ['CON__P00761'] 76840 10430 NVHAVFQEA True PC9_epitope_Rep3 1013.4930438849299 1013.49194993586 45.057 2 -0.004506625788016461 0.010619698245159619 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 8887 12474 AVGAAAFL True H1975_Epitope_Rep2 718.40137534622 718.40082496793 53.07 1 -0.0045098713984372705 0.010619698245159619 0.9438714419765777 ['ENSG00000179921|ENST00000519574|GPBAR1'] 61377 7703 LLEKEREDLY True H1975_Epitope_Rep2 1306.6768814729799 1306.67524490379 34.584 3 -0.004515786180766445 0.010619698245159619 0.9438714419765777 ['ENSG00000102189|ENST00000322349|EEA1'] 117840 15518 VAPEEHPLLL True PC9_epitope_Rep2 1116.6179100448799 1116.6168099358601 64.965 2 -0.004520022545819038 0.010619698245159619 0.9438714419765777 ['ENST00000587663.1_1_18:60109485-60109668:+|nuORF'] 5843 7582 APGIPRKD True PC9_epitope_Rep1 852.4817509252399 852.48064993586 33.983 2 -0.0045272519346604475 0.010619698245159619 0.9438714419765777 ['ENST00000567570.5_3_15:75182414-75182582:+|nuORF'] 11927 17433 DHSIIETL True PC9_epitope_Rep3 926.47091145802 926.46980993586 72.23 2 -0.004554329187017998 0.010619698245159619 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 60128 15355 LHVPGPMAV True PC9_epitope_Rep2 919.49495846123 919.49386993586 64.345 2 -0.004559092359327059 0.010619698245159619 0.9438714419765777 ['ENSG00000102243|ENST00000370634|VGLL1'] 106571 8347 SVYDGHGGEEV True PC9_epitope_Rep1 1147.47818166643 1147.47708993586 36.94 2 -0.004578789996293776 0.010619698245159619 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G'] 81215 18320 PPLPLPPPP True PC9_epitope_Rep2 923.5480395799099 923.54694993586 75.796 2 -0.004654566274211497 0.010619698245159619 0.9438714419765777 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'MAMLD1|p.P359L|1|0.23|ENSG00000013619|chrX:150470649-150470649|C/T|missense_variant', 'ENSG00000188493|ENST00000378313|ACTMAP'] 7782 9188 ASVPKVETV True PC9_epitope_Rep3 928.52294703088 928.52184993586 40.28 2 -0.0046681704699017765 0.010619698245159619 0.9438714419765777 ['ENSG00000100664|ENST00000216554|EIF5'] 395 18853 AALGPGVLAV True PC9_epitope_Rep4 866.5225531080599 866.52144993586 80.604 2 -0.004675295120915524 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000275183|Q96B70|LENG9', 'ENSG00000275183|ENST00000611161|LENG9', 'LENG9|p.P188Cfs*38|1|0.29|ENSG00000275183|chr19:54462965-54462966|-/GGCA|frameshift_variant'] 114266 17315 TSAESFVNV True PC9_epitope_Rep5 952.45017601344 952.44906993586 71.604 2 -0.004685927278989975 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 7001 9489 AQQPTAVQV True PC9_epitope_Rep2 940.4977949121998 940.49668993586 41.839 2 -0.004689755814012998 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'ENST00000467203.5_1_1:41157373-41224011:+|nuORF', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 94071 13286 RVVDELDNQM True PC9_epitope_Rep3 1217.57103650545 1217.56992993586 56.139 2 -0.004710362945217601 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000085231|Q9Y3D8-2|AK6', 'ENSG00000085231|ENST00000380822|AK6'] 118639 5144 VEAPPPSSP True H1975_Epitope_Rep2 879.43379767331 879.43270993586 24.863 2 -0.004729855709821699 0.010619698245159619 0.9438714419765777 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 105961 12489 SVLGKVNEI True PC9_epitope_Rep2 957.54949613189 957.54838993586 53.347 2 -0.004794843519675891 0.010619698245159619 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 6361 6541 APRQPGLMA True PC9_epitope_Rep2 939.4960210903898 939.49492993586 30.574 2 -0.0048165081266134295 0.010619698245159619 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 42842 21082 IFLSQPILL True PC9_epitope_Rep6 1042.64266824074 1042.6415699358602 93.917 2 -0.004838204741945439 0.010640823638600505 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 9678 19449 AYGSLFNTI True PC9_epitope_Rep6 984.4916469026 984.49054993586 87.474 2 -0.004838614404322277 0.010640823638600505 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 48556 6802 KEGMNIVEA True H1975_Epitope_Rep2 989.4851816231699 989.48408993586 31.082 2 -0.00488592409437323 0.01066102682521527 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000435399.1_1_1:45880815-45881013:+|nuORF', 'ENST00000420099.1_1_13:91924337-91924628:-|nuORF', 'ENST00000449839.1_1_19:12618945-12619074:+|nuORF', 'ENST00000454070.2_1_1:101736433-101736811:-|nuORF', 'ENST00000585753.1_1_19:30412142-30412556:+|nuORF', 'ENST00000440938.1_1_2:174350595-174351021:-|nuORF', 'ENST00000418508.1_1_2:130254157-130254292:+|nuORF', 'ENST00000562009.1_1_15:74654250-74654382:+|nuORF', 'ENST00000567565.3_1_15:76039466-76039598:+|nuORF', 'ENST00000567559.1_1_16:77926680-77926809:+|nuORF', 'ENST00000550612.1_1_12:31014923-31015109:+|nuORF'] 124633 22252 VLIDDLTTL True PC9_epitope_Rep3 1001.56447748969 1001.56338993586 90.878 2 -0.004886282033482663 0.01066102682521527 0.9438714419765777 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'ENST00000370308.8_1_6:74189644-74210455:+|nuORF', 'nc|ENSG00000135297|Q9Y2Z2-2|MTO1'] 31934 6858 GERIPDVAA True NCI_RA007_Epitope_Rep5 926.4821448480599 926.48104993586 33.063 2 -0.004894715519169282 0.01066102682521527 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.I37L|1|0.44|ENSG00000182220|chrX:40589057-40589057|A/C|missense_variant'] 25197 9021 FEADPPGQV True H1975_Epitope_Rep3 958.4396113297399 958.4390649679301 39.694 1 -0.004907124625930832 0.01066102682521527 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 119826 7964 VEVPAPAA True H1975_Epitope_Rep2 752.4068546494799 752.40630496793 35.581 1 -0.004917962920064478 0.01066102682521527 0.9438714419765777 ['ENST00000462672.1_1_10:131506162-131515894:+|nuORF', 'ENSG00000170430|ENST00000651593|MGMT'] 116491 9196 TYDKGYQF True PC9_epitope_Rep6 1020.45526139388 1020.45416993586 45.505 2 -0.004927126356880323 0.01066102682521527 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 109975 17798 THSMDLVAL True PC9_epitope_Rep3 985.4902670036099 985.48916993586 73.659 2 -0.004943566081202173 0.01068122478044149 0.9438714419765777 ['ENST00000368535.2_1_10:135193041-135204956:+|nuORF', 'ENSG00000148832|ENST00000278060|PAOX', 'nc|ENSG00000254536|Q6QHF9-5|PAOX', 'nc|ENSG00000254536|Q6QHF9-4|PAOX'] 62131 21053 LLPDNFIAA True PC9_epitope_Rep2 972.5280324113199 972.52692993586 86.434 2 -0.004966015628874754 0.01068122478044149 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 9973 21209 AYSPAIQMF True PC9_epitope_Rep5 1026.4844533471799 1026.4833499358601 86.629 2 -0.005061637521223206 0.01068122478044149 0.9438714419765777 ['ENSG00000102595|ENST00000376747|UGGT2', 'nc|ENSG00000102595|Q9NYU1-2|UGGT2', 'UGGT2|p.W307Lfs*14|1|0.21|ENSG00000102595|chr13:95989983-95989984|CC/A|frameshift_variant'] 110157 12906 TIDDLEDKLK True PC9_epitope_Rep1 1188.62378327096 1188.6221249037899 54.515 3 -0.0050722461839809285 0.01068122478044149 0.9438714419765777 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF'] 7198 17125 ARDETEFYL True PC9_epitope_Rep5 1142.5244035828598 1142.52387496793 70.892 1 -0.005094782547339781 0.01068122478044149 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'RPL35A|p.K45R|1|0.05|ENSG00000182899|chr3:197951281-197951281|A/G|missense_variant'] 28042 17906 FRDAFTQEL True PC9_epitope_Rep1 1125.54547338061 1125.54436993586 73.667 2 -0.005107736276589497 0.01068122478044149 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 2813 11465 AEVEVSIPA True H1975_Epitope_Rep2 913.4756624852898 913.47511496793 49.155 1 -0.005118835673026955 0.010698186053534068 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 635 8609 AATAVTQAL True NCI_RA007_Epitope_Rep4 844.4654321547599 844.46432993586 39.897 2 -0.005198290297865008 0.010698186053534068 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.N779H|1|0.37|ENSG00000137076|chr9:35717269-35717269|T/G|missense_variant'] 39187 7409 HLGALLAR True PC9_epitope_Rep2 849.51847078713 849.51736993586 33.876 2 -0.005201057907556247 0.010698186053534068 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 73288 8264 NEINKLLAHR True PC9_epitope_Rep4 1206.6833042660999 1206.6816449037901 39.248 3 -0.005211263982473801 0.010698186053534068 0.9438714419765777 ['nc|ENSG00000149212|P58005-3|SESN3', 'ENSG00000149212|ENST00000536441|SESN3'] 6757 14367 AQELHTFEV True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 60.263 2 -0.005223850972971918 0.010698186053534068 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 27772 8470 FQEENTEKL True PC9_epitope_Rep3 1136.5349682665599 1136.5338699358601 37.541 2 -0.005241889782824281 0.010698186053534068 0.9438714419765777 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 120308 16593 VFPEKGYSF True PC9_epitope_Rep1 1072.5229470308798 1072.52184993586 68.649 2 -0.005243691711198066 0.010698186053534068 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 2355 4317 AEQERKEQVLP True H1975_Epitope_Rep2 1325.6939285194499 1325.6922749037901 21.715 3 -0.00526332476612694 0.010698186053534068 0.9438714419765777 ['ENSG00000136197|ENST00000350427|C7orf25', 'nc|nan|Q9BPX7-2|C7orf25'] 132540 19860 VYPGLAVFF True NCI_RA007_Epitope_Rep3 1011.5429541994698 1011.54184993586 86.559 2 -0.005266677926202503 0.010698186053534068 0.9438714419765777 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 70839 4343 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 21.82 2 -0.005268781082778629 0.010698186053534068 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 31360 5227 GEAPPGTPP True H1975_Epitope_Rep2 821.39193286133 821.3913849679301 25.173 1 -0.005290895022544638 0.010698186053534068 0.9438714419765777 ['ENSG00000131116|ENST00000300811|ZNF428'] 124972 7520 VLNENTVSA True PC9_epitope_Rep6 945.47672511445 945.47562993586 38.184 2 -0.005300818420596474 0.010698186053534068 0.9438714419765777 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1', 'ENST00000462441.1_1_2:63101526-63108832:+|nuORF', 'EHBP1-COMMD1|5|fusion', 'EHBP1-COMMD1|6|fusion', 'EHBP1-VAV2|2|fusion', 'EHBP1-VAV2|4|fusion', 'EHBP1-VAV2|1|fusion', 'EHBP1-VAV2|3|fusion'] 69493 10136 LVSESSDVLPK True PC9_epitope_Rep4 1172.6288686514001 1172.6277699358602 46.665 2 -0.00534139891086956 0.010698186053534068 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF', 'ENST00000425226.1_1_2:203705056-203705395:-|nuORF'] 17531 6662 EHINSVSAM True PC9_epitope_Rep2 986.44913046762 986.44802993586 31.031 2 -0.0053507130647997446 0.010698186053534068 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 116482 6480 TYDGNHDTF True PC9_epitope_Rep4 1068.4148531338801 1068.41374993586 32.042 2 -0.005355695152196545 0.010698186053534068 0.9438714419765777 ['ENSG00000136240|ENST00000258739|KDELR2', 'nc|ENSG00000136240|P33947-2|KDELR2', 'ENST00000599084.1_1_19:48892794-48894615:-|nuORF', 'nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 26820 9959 FLEGVGIR True H1975_Epitope_Rep1 889.5021520166499 889.50104993586 43.245 2 -0.005372869248870879 0.010698186053534068 0.9438714419765777 ['ENSG00000101331|ENST00000452892|CCM2L'] 136168 21767 YGIENEVFL True PC9_epitope_Rep2 1082.52842633414 1082.5278749679298 89.197 1 -0.005380717457071907 0.010698186053534068 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 124975 16693 VLNEYFHNV True PC9_epitope_Rep1 1133.5505587610498 1133.54946993586 69.037 2 -0.005382634648505655 0.010698186053534068 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 101654 20101 SPFPLEAV True PC9_epitope_Rep4 858.44871946146 858.4481749679301 85.452 1 -0.005387166742700888 0.010698186053534068 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 86094 13992 QPQLPYSQA True PC9_epitope_Rep3 1030.5083595959 1030.5072699358602 58.891 2 -0.005397137127084377 0.010698186053534068 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 8941 13742 AVGPIVQL True H1975_Epitope_Rep2 795.48543932335 795.48489496793 58.005 1 -0.005435883774541087 0.010713053974823245 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.K134Rfs*14|1|0.17|ENSG00000112531|chr6:163478888-163478888|A/-|frameshift_variant'] 53886 21792 KYIDYLMTW True PC9_epitope_Rep5 1231.5947320721498 1231.59362993586 88.855 2 -0.005438867408568872 0.010713053974823245 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A', 'nc|ENSG00000114978|Q9H8S9-2|MOB1A', 'ENST00000463975.1_1_2:74392309-74405801:-|nuORF', 'MOB1A|p.A148Qfs*5|1|0.11|ENSG00000114978|chr2:74159222-74159222|C/-|frameshift_variant', 'ENST00000509041.5_1_4:71768157-71841035:+|nuORF', 'ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 116824 19488 TYMDRVFKQF True PC9_epitope_Rep1 1333.6488929033296 1333.64725490379 79.778 3 -0.005444608156781906 0.010713053974823245 0.9438714419765777 ['ENSG00000158201|ENST00000289119|ABHD3'] 107244 10981 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 47.224 3 -0.00547969972829737 0.010713053974823245 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 78168 6705 PAPPPPPPP True NCI_RA007_Epitope_Rep2 865.46978925921 865.46868993586 30.693 2 -0.005480253859880813 0.010713053974823245 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 135019 9508 YAGSGNVL True PC9_epitope_Rep6 779.38136817763 779.3808149679301 46.831 1 -0.005488049978855466 0.010713053974823245 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 70855 5031 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 24.474 2 -0.005511343881446735 0.010713053974823245 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 100299 7070 SLLVLKNQET True NCI_RA007_Epitope_Rep5 1143.6499384491499 1143.6488499358602 33.876 2 -0.0055234024735884655 0.010713053974823245 0.9438714419765777 ['ENST00000531832.5_1_11:27063006-27067820:+|nuORF'] 70852 4697 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 23.192 2 -0.005542449798238481 0.010713053974823245 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 136363 5665 YHDEADQSAL True PC9_epitope_Rep6 1147.47818166643 1147.47708993586 29.895 2 -0.0055457494084734885 0.010713053974823245 0.9438714419765777 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 24437 13199 FAGM[Oxidation]PITL True H1975_Epitope_Rep3 864.44152628648 864.4409749679301 56.023 1 -0.005611991474707851 0.010713053974823245 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 29265 18320 FVDGSAIQV True PC9_epitope_Rep3 934.47599683846 934.47488993586 75.676 2 -0.0056144591578474795 0.010713053974823245 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 23728 21277 EYINFLENL True PC9_epitope_Rep6 1153.5655401188499 1153.56444993586 94.696 2 -0.005617360830849488 0.010713053974823245 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 87460 2732 QTESQQIRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 14.576 2 -0.005630454703558167 0.010713053974823245 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3'] 70433 19054 LYRLKFNEF True PC9_epitope_Rep1 1228.6604435632 1228.65934993586 78.082 2 -0.005660804757624988 0.010713053974823245 0.9438714419765777 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 85501 18804 QLIKELPEL True PC9_epitope_Rep4 1081.63831113629 1081.63720993586 80.415 2 -0.00568642066314303 0.010713053974823245 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 87974 12219 QVRDVIIAA True PC9_epitope_Rep5 983.5763795860698 983.5758349679301 51.987 1 -0.0056934350192369 0.010713053974823245 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 93530 8675 RSPATVEV True PC9_epitope_Rep4 857.4606811274899 857.45958993586 40.858 2 -0.0057037254418823066 0.010713053974823245 0.9438714419765777 ['nc|ENSG00000125611|Q9BSY4-2|CHCHD5'] 46224 23121 ITDPSILFL True PC9_epitope_Rep2 1017.5746482505699 1017.57354993586 94.426 2 -0.005714545213832071 0.010713053974823245 0.9438714419765777 ['nc|ENSG00000118777|Q9UNQ0-2|ABCG2', 'ABCG2|p.Q582Sfs*34|1|0.28|ENSG00000118777|chr4:88094653-88094653|G/-|frameshift_variant', 'ENSG00000118777|ENST00000237612|ABCG2'] 6444 6625 APSPATAAATA True PC9_epitope_Rep2 927.4661604307499 927.46506993586 30.894 2 -0.005730200085502446 0.010713053974823245 0.9438714419765777 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 107250 10618 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59143490379 45.829 3 -0.005734516045938576 0.010713053974823245 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 127098 10325 VQASHFEGL True PC9_epitope_Rep4 986.4821448480599 986.48104993586 47.405 2 -0.005741450903887934 0.010713053974823245 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 84000 4103 QEMQEVQSSR True PC9_epitope_Rep3 1220.5455500336 1220.54444993586 20.9 2 -0.005766470937319934 0.010713053974823245 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 70843 4708 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 23.201 2 -0.005779145224451024 0.010713053974823245 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 135521 7626 YEEAVKTLP True H1975_Epitope_Rep3 1048.54407639828 1048.5429699358601 34.316 2 -0.005780271132444607 0.010713053974823245 0.9438714419765777 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF'] 42820 17263 IFKPPDPDNTF True PC9_epitope_Rep2 1289.62920300457 1289.62810993586 71.662 2 -0.005800678294339103 0.010713053974823245 0.9438714419765777 ['ENSG00000165943|ENST00000298894|MOAP1'] 103313 20692 SQVAVAGLLTV True PC9_epitope_Rep4 1056.6179100448799 1056.61737496793 87.752 1 -0.005808154771714973 0.010713053974823245 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 39573 14394 HPIEPVLITA True PC9_epitope_Rep6 1088.62299542532 1088.62188993586 67.263 2 -0.005814423234729314 0.010713053974823245 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 97009 5311 SEVQSTVEA True H1975_Epitope_Rep1 948.4400052525599 948.43890993586 25.491 2 -0.005830805956315992 0.010713053974823245 0.9438714419765777 ['ENST00000518940.5_1_8:103855961-103870248:-|nuORF'] 107078 17645 SYLTSASSL True PC9_epitope_Rep3 927.45492704071 927.4543749679301 73.064 1 -0.005836509322085593 0.010732527316221633 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 15316 17419 EAITHLLGV True PC9_epitope_Rep6 951.5389314481898 951.53782993586 79.617 2 -0.005837020603488964 0.010732527316221633 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 75747 12556 NRAEDSICL True PC9_epitope_Rep3 1019.4705941881899 1019.46948993586 53.317 2 -0.0058536289799341985 0.010732527316221633 0.9438714419765777 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 13848 12181 DRAGSIVL True PC9_epitope_Rep5 829.46576650793 829.46466993586 51.844 2 -0.0058642181149587075 0.010732527316221633 0.9438714419765777 ['ENSG00000162704|ENST00000359856|ARPC5', 'DSTN-ARPC5|1|fusion', 'ENST00000462965.1_1_1:183596669-183602348:-|nuORF', 'nc|ENSG00000162704|O15511-2|ARPC5', 'ENST00000602490.1_1_1:183599580-183599799:-|nuORF'] 94514 18084 RYIDRIHIF True PC9_epitope_Rep3 1231.68257599011 1231.68094490379 74.758 3 -0.005887121663203955 0.010732527316221633 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 31702 10923 GEIIPHIPA True H1975_Epitope_Rep2 945.52836676449 945.52726993586 47.047 2 -0.005896832147245356 0.010732527316221633 0.9438714419765777 ['ENSG00000035687|ENST00000366535|ADSS2'] 25875 17179 FGHPLLVSV True PC9_epitope_Rep4 967.5491022090699 967.54800993586 74.085 2 -0.005900783976218743 0.010732527316221633 0.9438714419765777 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF', 'ENST00000488848.1_1_X:47102801-47104466:+|nuORF'] 70189 17556 LYLLNTTKL True PC9_epitope_Rep6 1077.64339651673 1077.6422899358602 80.168 2 -0.005931615026171275 0.010732527316221633 0.9438714419765777 ['ENSG00000076242|ENST00000231790|MLH1', 'nc|ENSG00000076242|P40692-2|MLH1', 'nc|ENSG00000076242|P40692-3|MLH1'] 53508 21067 KVLPGILFL True PC9_epitope_Rep4 998.6528390016199 998.65174993586 89.193 2 -0.005947065016400941 0.010732527316221633 0.9438714419765777 ['ENSG00000104998|ENST00000263379|IL27RA'] 661 17493 AATSVTFVGV True PC9_epitope_Rep6 950.5072969667399 950.50618993586 79.915 2 -0.00596025138649447 0.010749676863420939 0.9438714419765777 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF'] 70853 4793 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 23.564 2 -0.005965391705259002 0.010749676863420939 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 138596 11047 YRQKQVVIL True PC9_epitope_Rep3 1145.6920780446499 1145.69044490379 47.486 3 -0.00596682028267853 0.010749676863420939 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 69374 14525 LVQGELVTA True PC9_epitope_Rep1 928.5229470308799 928.52184993586 60.696 2 -0.005973858009666344 0.010749676863420939 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1'] 14262 4630 DSYVGDEAQSK True PC9_epitope_Rep2 1197.51496109797 1197.5138699358602 23.18 2 -0.005983079466121423 0.010749676863420939 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 95814 16655 SDGSFFLY True NCI_RA007_Epitope_Rep4 934.4072485723 934.4067049679301 72.213 1 -0.006008932745878943 0.010749676863420939 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 35699 11065 GTQPWFISK True NCI_RA007_Epitope_Rep5 1062.5498304850598 1062.5487299358601 49.196 2 -0.006014936480547536 0.010749676863420939 0.9438714419765777 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'MYLK|p.K903Rfs*3|1|0.3|ENSG00000065534|chr3:123700762-123700762|C/-|frameshift_variant'] 9627 15812 AYGGAFYAF True NCI_RA007_Epitope_Rep4 965.42831837005 965.4277649679301 68.675 1 -0.006027912925609653 0.010749676863420939 0.9438714419765777 ['ENSG00000126790|ENST00000247194|L3HYPDH', 'ENST00000527981.1_1_14:59945878-59946064:-|nuORF'] 1014 8231 AEAEPPSEVV True H1975_Epitope_Rep1 1026.48695544498 1026.48637496793 36.605 1 -0.006039116895114617 0.010749676863420939 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 116648 21604 TYIPGTQITF True PC9_epitope_Rep2 1139.58627556343 1139.5857749679299 88.574 1 -0.006094751914828915 0.010749676863420939 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 108412 5460 TEEDTPLKP True H1975_Epitope_Rep2 1028.5026055091198 1028.5015099358602 26.028 2 -0.00610427884502673 0.010749676863420939 0.9438714419765777 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4'] 29371 24576 FVEPFVILL True PC9_epitope_Rep1 1075.63176920387 1075.6306699358602 99.395 2 -0.006125147615475602 0.010749676863420939 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'nc|ENSG00000196296|O14983|ATP2A1', 'ENSG00000196296|ENST00000395503|ATP2A1'] 115569 6993 TVIAKVNNV True PC9_epitope_Rep4 956.5654805492 956.56438993586 34.145 2 -0.006128840875268931 0.010749676863420939 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 25804 15036 FGANAILGV True H1975_Epitope_Rep1 860.4756029156399 860.4750549679301 63.084 1 -0.006135152063866058 0.010749676863420939 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 2668 7187 AETAAVTVAA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 32.578 2 -0.006155025858400607 0.010749676863420939 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 97645 7720 SHAQTVVL True PC9_epitope_Rep5 853.46576650793 853.46466993586 34.636 2 -0.006158449549349494 0.010749676863420939 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 96619 4071 SEMRAPPAA True NCI_RA007_Epitope_Rep5 928.4436511643598 928.44254993586 22.106 2 -0.006159049588243688 0.010749676863420939 0.9438714419765777 ['nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000108312|ENST00000436088|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF', 'UBTF|p.K594Rfs*63|1|0.17|ENSG00000108312|chr17:44209476-44209476|T/-|frameshift_variant'] 1316 6343 AEEAARKLLPA True H1975_Epitope_Rep2 1167.66117183919 1167.65953490379 29.328 3 -0.0061729777935897925 0.010749676863420939 0.9438714419765777 ['ENSG00000088298|ENST00000374492|EDEM2', 'nc|ENSG00000088298|Q9BV94-2|EDEM2'] 70176 14951 LYLKALEGF True NCI_RA007_Epitope_Rep5 1052.5906326678798 1052.5895299358601 64.175 2 -0.006208904710768598 0.010749676863420939 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1'] 37849 5800 HDPSAVAV True PC9_epitope_Rep3 794.3922672145001 794.39116993586 27.38 2 -0.006231874775223158 0.010764262648008612 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 43173 4901 IGSGC[Carbamidomethyl]NLDSAR True NCI_RA007_Epitope_Rep1 1148.5244209456298 1148.5233299358601 23.143 2 -0.0062377523741633314 0.010764262648008612 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 30620 5808 GALALEEK True PC9_epitope_Rep6 829.4545331178899 829.45342993586 30.546 2 -0.006258891082096132 0.010764262648008612 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 34623 19383 GQIEVVPEV True PC9_epitope_Rep3 968.5178616504398 968.51731496793 79.78 1 -0.006262937016914342 0.010764262648008612 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 103696 10855 SRDSSILIA True PC9_epitope_Rep2 960.52400966004 960.52290993586 47.072 2 -0.0062802574950699954 0.010764262648008612 0.9438714419765777 ['ENST00000327320.8_2_11:85989390-85989564:+|nuORF', 'ENST00000528250.1_1_11:85988947-85989564:+|nuORF', 'ENSG00000074266|ENST00000263360|EED', 'nc|ENSG00000074266|O75530-2|EED'] 109363 14728 TGISDVFAK True PC9_epitope_Rep3 936.4916469026 936.49054993586 61.789 2 -0.006293047891531937 0.010764262648008612 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 26282 17374 FIDDANYSV True PC9_epitope_Rep4 1042.4607406971402 1042.46017496793 74.832 1 -0.0063612403061225785 0.010764262648008612 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 72922 16675 NAYTGIVLL True H1975_Epitope_Rep3 962.54368247546 962.54258993586 69.661 2 -0.006374235113463716 0.010764262648008612 0.9438714419765777 ['ENST00000535245.1_1_12:121017538-121019044:-|nuORF', 'ENSG00000167272|ENST00000357500|POP5', 'ENST00000542776.5_1_12:121017123-121019113:-|nuORF'] 83840 12935 QEFRFLPPP True NCI_RA007_Epitope_Rep5 1129.5920296502097 1129.59092993586 56.436 2 -0.006393397252929871 0.010764262648008612 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 17231 13760 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 64.727 2 -0.0064340219196294315 0.010764262648008612 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 11781 7963 DHIKDSFHSL True PC9_epitope_Rep4 1197.57783613805 1197.57619490379 38.072 3 -0.0064423823800294705 0.010764262648008612 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX', 'nc|ENSG00000125952|P61244-6|MAX', 'ENST00000556702.1_1_14:65560332-65569057:-|nuORF', 'nc|ENSG00000125952|P61244-5|MAX'] 23774 11455 EYISTVKTL True PC9_epitope_Rep6 1052.57537652656 1052.57426993586 55.123 2 -0.006458882689835828 0.010764262648008612 0.9438714419765777 ['ENST00000492488.5_1_2:242641480-242651487:+|nuORF', 'ENST00000489509.1_1_2:242641480-242659033:+|nuORF', 'nc|ENSG00000168395|Q8WYH8-2|ING5', 'ENSG00000168395|ENST00000313552|ING5', 'ENST00000482774.5_1_2:242641480-242659534:+|nuORF'] 63246 9254 LPAGGTAVGT True PC9_epitope_Rep1 842.4497820906199 842.44868993586 40.448 2 -0.006469594413282898 0.010764262648008612 0.9438714419765777 ['FH|p.A273P|1|0.31|ENSG00000091483|chr1:241506090-241506090|C/G|missense_variant'] 8972 12744 AVHDSFVAV True PC9_epitope_Rep3 943.4763311916299 943.4752299358599 54.04 2 -0.006480972276989615 0.010764262648008612 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 1472 11514 AEELSTALP True H1975_Epitope_Rep3 929.4705771048499 929.47002496793 49.414 1 -0.006515078628970268 0.010764262648008612 0.9438714419765777 ['ENSG00000115207|ENST00000264720|GTF3C2', 'GTF3C2|p.A731Cfs*26|1|0.4|ENSG00000115207|chr2:27328533-27328534|-/A|frameshift_variant', 'GTF3C2|p.H458Tfs*71|1|0.41|ENSG00000115207|chr2:27336012-27336012|G/-|frameshift_variant', 'nc|ENSG00000115207|Q8WUA4-2|GTF3C2'] 30248 5840 GAAGGLRGV True PC9_epitope_Rep1 756.4242360491199 756.42312993586 27.278 2 -0.006516278255184328 0.010764262648008612 0.9438714419765777 ['ENST00000291442.3_1_19:17351565-17356474:-|nuORF'] 68869 10974 LVEEPQNLIK True NCI_RA007_Epitope_Rep2 1181.6655885132898 1181.66448993586 47.296 2 -0.006524841922328642 0.010764262648008612 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 4511 9701 AKLRLEVNL True NCI_RA007_Epitope_Rep5 1054.6498788795 1054.6487899358601 43.951 2 -0.006529868930899522 0.010764262648008612 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 19590 9996 ELRGPPVLP True H1975_Epitope_Rep2 976.5705659296399 976.56946993586 43.44 2 -0.006554834971277952 0.010764262648008612 0.9438714419765777 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-3|MTCL1'] 115004 21900 TTLGDMIYV True PC9_epitope_Rep5 1011.49468367771 1011.49417496793 89.277 1 -0.006589546797765856 0.010764262648008612 0.9438714419765777 ['ENSG00000117153|ENST00000367261|KLHL12', 'nc|ENSG00000117153|Q53G59-2|KLHL12'] 38326 5611 HFVALSTNTTK True NCI_RA007_Epitope_Rep4 1217.64043639461 1217.6393299358601 28.182 2 -0.006606961731665911 0.010764262648008612 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI'] 54724 8312 LAELEQER True PC9_epitope_Rep3 986.50327421546 986.50216993586 36.943 2 -0.006612307242716866 0.010764262648008612 0.9438714419765777 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4'] 102316 6599 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48159496793 30.186 1 -0.006623908794511482 0.010764262648008612 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 87820 19125 QVIPQFQTV True PC9_epitope_Rep4 1058.5760452328998 1058.57494993586 81.657 2 -0.00664607327802171 0.010764262648008612 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 61705 20822 LLIENVASL True PC9_epitope_Rep4 970.5698972232999 970.56880993586 88.242 2 -0.006652154969112671 0.010764262648008612 0.9438714419765777 ['nc|ENSG00000233276|P07203-2|GPX1', 'ENSG00000233276|ENST00000419783|GPX1', 'ENST00000388829.3_1_X:13397321-13397372:-|nuORF', 'ENST00000419783.1_2_3:49395567-49395990:-|nuORF'] 105295 15491 STTNGGILTV True PC9_epitope_Rep4 961.50802524273 961.50692993586 67.513 2 -0.00667306769687644 0.010764262648008612 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 34831 12922 GQVGGEINV True PC9_epitope_Rep5 871.43994568291 871.43884993586 54.715 2 -0.006673983705700394 0.010764262648008612 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 84914 13364 QHSVPLQL True PC9_epitope_Rep3 920.50796567308 920.50686993586 56.437 2 -0.006676636440063999 0.010764262648008612 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 2656 6484 AETAAVTVA True H1975_Epitope_Rep2 831.43379767331 831.43270993586 29.857 2 -0.006692871017617711 0.010764262648008612 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 102487 6790 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 33.321 2 -0.006695516791777041 0.010764262648008612 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 101984 11548 SPNGQFVAP True PC9_epitope_Rep4 915.4450310633499 915.44392993586 52.181 2 -0.006717365556348925 0.010784166002970488 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 43878 16732 ILDEVIMGY True H1975_Epitope_Rep2 1051.5259838059899 1051.52547496793 69.595 1 -0.006747834809548477 0.010784166002970488 0.9438714419765777 ['ENSG00000138160|ENST00000260731|KIF11'] 123175 11321 VHGPPVQL True PC9_epitope_Rep5 845.47593726881 845.47484993586 48.54 2 -0.006784314359160414 0.010784166002970488 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 105840 18265 SVISQSTLV True PC9_epitope_Rep4 932.51786165044 932.51676993586 78.326 2 -0.006791443667855098 0.010784166002970488 0.9438714419765777 ['ENST00000540013.5_1_11:94212913-94219150:-|nuORF'] 37582 16081 GYSEHFVEF True PC9_epitope_Rep6 1113.47672511445 1113.47562993586 74.186 2 -0.0067957555648714574 0.010784166002970488 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 116854 16396 TYNEPGSQVF True PC9_epitope_Rep3 1140.50875351872 1140.5076499358602 68.204 2 -0.006819795802648056 0.010784166002970488 0.9438714419765777 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.W992Mfs*12|1|0.31|ENSG00000163939|chr3:52587502-52587503|-/T|frameshift_variant', 'PBRM1|p.P1361Hfs*23|1|0.28|ENSG00000163939|chr3:52563287-52563287|G/-|frameshift_variant'] 127632 16001 VRDPRVLIL True PC9_epitope_Rep5 1079.68151336095 1079.68040993586 66.538 2 -0.006849305995711425 0.010784166002970488 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 134982 8788 YAGEDCPKV True PC9_epitope_Rep5 980.4273323938799 980.42622993586 38.746 2 -0.006873669669773617 0.010804993542832543 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'ENST00000491202.5_1_3:179280826-179288052:+|nuORF'] 105722 8949 SVHKGFAFV True PC9_epitope_Rep6 990.5287011176598 990.52760993586 44.408 2 -0.006875640550175879 0.010804993542832543 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 8485 9219 ATVAVPLVGK True NCI_RA007_Epitope_Rep4 953.5909670210499 953.58986993586 42.311 2 -0.006898482371813908 0.010804993542832543 0.9438714419765777 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 110150 19757 TIDDGIFEV True PC9_epitope_Rep6 1007.48114178855 1007.48004993586 88.655 2 -0.0069160234159908966 0.010822557393979818 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 53692 10289 KYAPRFNGF True PC9_epitope_Rep4 1098.5610638750998 1098.5599699358602 47.262 2 -0.006930681791613057 0.010822557393979818 0.9438714419765777 ['ENSG00000170832|ENST00000300896|USP32'] 94217 5182 RWPKKSAEF True PC9_epitope_Rep4 1147.61382772395 1147.61218490379 26.63 3 -0.006982859487888915 0.010822557393979818 0.9438714419765777 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 72070 15286 MRCALALSA True PC9_epitope_Rep5 934.4728431176599 934.47174993586 63.807 2 -0.006989833406130064 0.010822557393979818 0.9438714419765777 ['ENSG00000128567|ENST00000378555|PODXL', 'nc|ENSG00000128567|O00592-2|PODXL'] 98358 7295 SIHENFSQA True PC9_epitope_Rep5 1031.4672230599099 1031.4661299358602 33.023 2 -0.007011709177761049 0.010822557393979818 0.9438714419765777 ['ENSG00000125633|ENST00000376300|CCDC93'] 42784 16229 IFIDPGYQTF True NCI_RA007_Epitope_Rep3 1199.58627556343 1199.5851699358602 71.525 2 -0.007019192473709988 0.010822557393979818 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 80643 17677 PLPPLPPPP True PC9_epitope_Rep4 923.5480395799099 923.54694993586 76.019 2 -0.007038073697215535 0.010822557393979818 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 122827 6786 VGVNGFGR True PC9_epitope_Rep6 804.4242360491198 804.42312993586 34.924 2 -0.007050500312912447 0.010822557393979818 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'ENST00000396856.5_1_12:6643998-6645957:+|nuORF'] 104808 5965 STDSETLRY True H1975_Epitope_Rep2 1070.48801807414 1070.48747496793 27.927 1 -0.007058154417043557 0.010822557393979818 0.9438714419765777 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 39589 12243 HPKYSDMIVA True PC9_epitope_Rep3 1159.56957995347 1159.56848993586 52.122 2 -0.007061248420585291 0.010822557393979818 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 12710 11061 DLFPYEESK True H1975_Epitope_Rep3 1126.51825557326 1126.51714993586 47.637 2 -0.007061863078680836 0.010822557393979818 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 102715 11237 SQDSTAVAL True PC9_epitope_Rep2 890.4345259492999 890.43397496793 48.55 1 -0.007077038891414456 0.010822557393979818 0.9438714419765777 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 6930 22419 AQLGGVLLL True PC9_epitope_Rep1 882.5538532363399 882.55274993586 91.054 2 -0.007095829025961087 0.010822557393979818 0.9438714419765777 ['nc|ENSG00000237515|B4DS77-3|SHISA9', 'ENSG00000237515|ENST00000558583|SHISA9'] 109528 20222 THALEWPSL True PC9_epitope_Rep1 1052.52909504048 1052.5279899358602 82.613 2 -0.007109047422952235 0.010822557393979818 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 7158 8127 ARAIVNSAL True PC9_epitope_Rep4 913.53451477409 913.53340993586 38.715 2 -0.007120601633245158 0.010822557393979818 0.9438714419765777 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000475971.5_1_7:893033-912965:+|nuORF', 'ENST00000413171.6_1_7:892397-912965:+|nuORF', 'nc|ENSG00000164828|O94901-6|SUN1'] 83212 12200 QAADLAYQL True NCI_RA007_Epitope_Rep4 991.4974605590301 991.49691496793 53.921 1 -0.007122935892949992 0.010822557393979818 0.9438714419765777 ['ENSG00000147113|ENST00000398000|DIPK2B', 'DIPK2B|p.D262Y|1|0.55|ENSG00000147113|chrX:45154087-45154087|C/A|missense_variant'] 36090 7939 GVEGAIHA True PC9_epitope_Rep5 752.3817025308 752.38060993586 35.477 2 -0.007139077324715644 0.010822557393979818 0.9438714419765777 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK', 'TBCK|p.F654Sfs*7|1|0.1|ENSG00000145348|chr4:106193707-106193707|A/-|frameshift_variant'] 132198 9379 VYKDHQTITI True PC9_epitope_Rep1 1216.6451874218799 1216.6440899358602 40.934 2 -0.007150549657482402 0.010843373493975903 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 136615 14378 YIDDVFHAL True NCI_RA007_Epitope_Rep3 1091.52876068731 1091.52766993586 63.87 2 -0.007239971593504704 0.010843373493975903 0.9438714419765777 ['ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1', 'nc|ENSG00000143622|Q92963-2|RIT1'] 73786 17034 NHDKLIPLL True PC9_epitope_Rep2 1061.62332977849 1061.62222993586 70.771 2 -0.007246652188791472 0.010843373493975903 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 113261 22084 TQFADMISL True PC9_epitope_Rep3 1024.4899326504399 1024.4888299358602 90.242 2 -0.00725562193915827 0.010863018413353983 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 74483 5540 NKLDHYAIIK True NCI_RA007_Epitope_Rep5 1213.68190728377 1213.68025490379 27.995 3 -0.007290776302764474 0.010863018413353983 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000467573.1_1_21:40499576-40499963:+|nuORF', 'ENST00000498163.1_1_8:23064590-23064794:+|nuORF', 'ENST00000438548.2_1_6:133318790-133319099:-|nuORF', 'ENST00000395315.2_1_2:54756482-54756872:+|nuORF'] 28274 10212 FRVPTANVS True PC9_epitope_Rep6 989.5294293936499 989.52832993586 49.926 2 -0.007304807522275608 0.010863018413353983 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'GAPDH|p.A232T|1|0.08|ENSG00000111640|chr12:6537752-6537752|G/A|missense_variant'] 125733 18769 VNEVAILSL True PC9_epitope_Rep6 956.5542471591599 956.55369496793 84.834 1 -0.007311671321759984 0.010863018413353983 0.9438714419765777 ['ENST00000455385.6_1_7:105731299-105731344:-|nuORF'] 139430 16247 YTELEAIMY True H1975_Epitope_Rep2 1131.5158130451098 1131.51527496793 67.702 1 -0.0073380962027168465 0.010863018413353983 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF', 'ENST00000512029.1_1_5:118832263-118835290:+|nuORF'] 46491 19798 ITPENLPQI True PC9_epitope_Rep2 1023.5600608155898 1023.55947496793 81.543 1 -0.00734418805907173 0.010863018413353983 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 104637 11979 SSVVTVPSSNF True NCI_RA007_Epitope_Rep5 1122.55570371114 1122.55460993586 52.737 2 -0.007373854102912463 0.010863018413353983 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211893|P01859|IGHG2'] 58008 6900 LERDPIPAA True H1975_Epitope_Rep1 980.5290950404798 980.52798993586 31.581 2 -0.007379151826993262 0.010863018413353983 0.9438714419765777 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000493232.5_1_7:2583168-2583660:-|nuORF', 'nc|ENSG00000106009|Q6PJG6-2|BRAT1', 'ENST00000469750.5_1_7:2583168-2595320:-|nuORF'] 113747 6582 TRDPAQRVVL True PC9_epitope_Rep4 1153.6567551650899 1153.65511490379 32.473 3 -0.007435131864587806 0.010905805674460626 0.9438714419765777 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000460980.5_1_7:150773814-150775027:-|nuORF', 'nc|ENSG00000164896|Q14296-2|FASTK'] 61343 6542 LLEGEEERLR True NCI_RA007_Epitope_Rep5 1242.6568147347398 1242.65515490379 31.827 3 -0.007447607038829295 0.01092614100744182 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 34890 7294 GQVPPGESV True PC9_epitope_Rep4 868.42904664604 868.4279499358599 35.373 2 -0.007452858288134862 0.01092614100744182 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 102308 5836 SPVFRTGSE True PC9_epitope_Rep6 978.4770594676199 978.47596993586 30.662 2 -0.007462094444365519 0.01092614100744182 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 4177 9833 AIATFNVDHK True PC9_epitope_Rep1 1114.5771078620598 1114.5760099358602 42.684 2 -0.007470687764400811 0.01092614100744182 0.9438714419765777 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3'] 7744 11846 ASSYIAHL True PC9_epitope_Rep5 860.4392174069199 860.43812993586 50.564 2 -0.007477710798039916 0.01092614100744182 0.9438714419765777 ['ENSG00000125878|ENST00000246080|TCF15', 'MSC|p.R160W|1|0.07|ENSG00000178860|chr8:71843701-71843701|G/A|missense_variant', 'ENSG00000118526|ENST00000367882|TCF21', 'ENSG00000178860|ENST00000325509|MSC'] 56723 13510 LEAHFVPLV True H1975_Epitope_Rep2 1023.5753169569099 1023.57420993586 57.101 2 -0.00748772950072662 0.0109431771762733 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF', 'PPP2R1A|p.D123N|1|0.1|ENSG00000105568|chr19:52211356-52211356|G/A|missense_variant'] 54952 9280 LAHGALPVAT True PC9_epitope_Rep5 948.53926580136 948.53816993586 40.644 2 -0.0074921304091980345 0.0109431771762733 0.9438714419765777 ['ENSG00000181778|ENST00000377311|TMEM252'] 8918 14127 AVGKIFSNV True PC9_epitope_Rep3 933.52836676449 933.52726993586 59.425 2 -0.007515881121200881 0.0109431771762733 0.9438714419765777 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 6755 14450 AQELHTFEV True PC9_epitope_Rep1 1072.5189242796 1072.5178299358602 60.404 2 -0.007518917818597569 0.0109431771762733 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 100450 22292 SLPEVLPIL True PC9_epitope_Rep4 979.5953836951498 979.59428993586 93.985 2 -0.007555123710216481 0.0109431771762733 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 131764 14539 VYADQPHIF True PC9_epitope_Rep4 1088.52909504048 1088.5279899358602 63.838 2 -0.007565296249448642 0.0109431771762733 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 91189 17779 RLQELFAV True PC9_epitope_Rep5 974.5549158654998 974.55380993586 73.406 2 -0.007590739076307703 0.0109431771762733 0.9438714419765777 ['ENST00000340291.6_1_9:35812160-35812229:-|nuORF'] 121715 8614 VGLQVVAVK True H1975_Epitope_Rep1 911.5804023373498 911.57930993586 38.061 2 -0.0075909147416089165 0.0109431771762733 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1'] 79277 8775 PGHLQEGFG True PC9_epitope_Rep3 940.4402800360799 940.43918993586 38.706 2 -0.007593662230611935 0.0109431771762733 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 106174 8599 SVPEGPWWRK True NCI_RA007_Epitope_Rep3 1240.63529144452 1240.6336349037902 40.899 3 -0.0076201388261361224 0.0109431771762733 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1'] 1854 4847 AEIEHKVIEA True H1975_Epitope_Rep3 1137.60298825673 1137.60133490379 23.769 3 -0.0076280938413617804 0.0109431771762733 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11'] 138488 13426 YRGQFPEL True PC9_epitope_Rep6 1008.5028802926398 1008.50178993586 63.326 2 -0.007687529932960918 0.0109431771762733 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 35765 20877 GTVEQIVYL True PC9_epitope_Rep2 1020.5491617787197 1020.54806993586 85.746 2 -0.007691952501111526 0.0109431771762733 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 83147 6306 PYSDSTAKL True PC9_epitope_Rep2 980.48147614172 980.48036993586 29.654 2 -0.00770674895177408 0.0109431771762733 0.9438714419765777 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF', 'ENST00000602040.5_1_19:50354666-50357992:+|nuORF', 'PTOV1|p.M142Hfs*58|2|0.28|ENSG00000104960|chr19:49854860-49854861|-/A|frameshift_variant'] 17761 10709 EHTVETLVV True H1975_Epitope_Rep2 1025.53932537101 1025.53822993586 46.216 2 -0.007711950134366955 0.0109431771762733 0.9438714419765777 ['ENST00000378898.8_1_15:100603866-100879329:-|nuORF', 'ENSG00000140470|ENST00000268070|ADAMTS17'] 109752 17273 THIDTVINAL True PC9_epitope_Rep4 1095.59242357303 1095.5913299358601 74.446 2 -0.007728660951828981 0.0109431771762733 0.9438714419765777 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF'] 103343 3957 SQVEGEHQL True PC9_epitope_Rep4 1025.47778774361 1025.4766899358601 21.439 2 -0.007753964942886698 0.0109431771762733 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 71294 13791 MHAETAFESL True PC9_epitope_Rep6 1134.5015599633 1134.50046993586 64.846 2 -0.007758445324557257 0.0109431771762733 0.9438714419765777 ['ENST00000425263.5_1_2:44586762-44586792:-|nuORF'] 17898 14320 EIDLFNIR True H1975_Epitope_Rep3 1018.54474510462 1018.54364993586 60.428 2 -0.007763818103467442 0.0109431771762733 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF', 'ENST00000515717.1_1_4:122590675-122593697:-|nuORF'] 54942 7977 LAHAAFSAA True PC9_epitope_Rep1 857.43955176009 857.43844993586 35.506 2 -0.007777212248961946 0.010964205095130602 0.9438714419765777 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'MMGT1|p.E37Kfs*7|1|0.46|ENSG00000169446|chrX:135971082-135971082|T/-|frameshift_variant', 'ENSG00000169446|ENST00000305963|MMGT1'] 4122 8290 AHTAGVVL True PC9_epitope_Rep3 766.43373810366 766.43264993586 36.862 2 -0.007781206089725296 0.010964205095130602 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 108460 11970 TEENTIFAP True H1975_Epitope_Rep2 1020.4763907612798 1020.47528993586 51.122 2 -0.007796330666804305 0.010981218034125585 0.9438714419765777 ['ENSG00000102390|ENST00000373358|PBDC1'] 48297 18740 KDLPWPPP True PC9_epitope_Rep1 948.5069030439199 948.50580993586 76.873 2 -0.007838559554443528 0.010981218034125585 0.9438714419765777 ['ENSG00000138606|ENST00000690270|SHF', 'nc|ENSG00000138606|Q7M4L6|SHF'] 40069 10735 HRAPIFMRV True PC9_epitope_Rep2 1125.62295293901 1125.6213149037899 46.611 3 -0.007855801002302416 0.010981218034125585 0.9438714419765777 ['ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'ENST00000567998.5_1_16:28619793-28620024:-|nuORF'] 78192 8872 PAPPPPPPP True PC9_epitope_Rep2 865.46978925921 865.46868993586 39.481 2 -0.00787738468978114 0.010981218034125585 0.9438714419765777 ['FHDC1|p.P31L|1|0.29|ENSG00000137460|chr4:152943149-152943149|C/T|missense_variant', 'ENST00000592092.1_1_19:36224173-36224410:+|nuORF', 'ENST00000263228.3_1_9:33817570-33817774:+|nuORF', 'CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'nc|ENSG00000184937|P19544-2|WT1', 'ENSG00000184937|ENST00000452863|WT1', 'nc|ENSG00000184937|P19544-8|WT1', 'nc|ENSG00000184937|P19544|WT1', 'nc|ENSG00000184937|P19544-3|WT1', 'nc|ENSG00000184937|P19544-4|WT1', 'RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'ENSG00000142235|ENST00000600059|LMTK3', 'ENSG00000158195|ENST00000618852|WASF2', 'ENSG00000167771|ENST00000301459|RCOR2', 'ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENSG00000182601|ENST00000331351|HS3ST4', 'nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'ENSG00000197483|ENST00000598519|ZNF628', 'ENSG00000215474|ENST00000425639|SKOR2', 'ENSG00000272333|ENST00000420124|KMT2B', 'ENST00000378204.6_1_8:119123785-119123992:-|nuORF', 'nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91', 'PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant', 'RB1-CNIH3|1|fusion'] 69466 17347 LVSDSALYF True H1975_Epitope_Rep2 1013.50696261357 1013.50637496793 72.02 1 -0.00789589520576551 0.010981218034125585 0.9438714419765777 ['nc|ENSG00000211777|A0A0B4J244|TRAV3'] 85997 21727 QPILLELEA True PC9_epitope_Rep2 1024.580461907 1024.57936993586 89.049 2 -0.007950825785495446 0.010981218034125585 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 93828 5233 RVEEAIHPV True PC9_epitope_Rep4 1048.56654317836 1048.5654499358602 26.828 2 -0.007982785271320863 0.010981218034125585 0.9438714419765777 ['ENST00000367590.8_1_1:180601192-180601402:+|nuORF'] 130772 5969 VVEDKVEGY True H1975_Epitope_Rep3 1036.5076908895599 1036.5065899358601 27.971 2 -0.007987744755927683 0.010981218034125585 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF'] 113114 12250 TQAPGNPVL True PC9_epitope_Rep1 895.4763311916299 895.4752299358599 51.98 2 -0.008007496881275913 0.010981218034125585 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 130924 20836 VVIGADTIVTV True PC9_epitope_Rep2 1085.6332257558502 1085.6321299358601 85.591 2 -0.008011256990680287 0.010981218034125585 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL'] 72009 19885 MQGPPLLTAA True PC9_epitope_Rep3 997.52665251233 997.52554993586 81.726 2 -0.008040075067362961 0.010981218034125585 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 139658 13692 YTSPVNPAV True PC9_epitope_Rep5 946.47599683846 946.47488993586 57.693 2 -0.008082341265213242 0.010981218034125585 0.9438714419765777 ['ENSG00000134825|ENST00000537328|TMEM258'] 108233 8125 TEAGFPEQA True H1975_Epitope_Rep2 948.4188758851598 948.4183249679301 36.203 1 -0.008091196296361179 0.010981218034125585 0.9438714419765777 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 106862 15561 SYIEHIFEI True NCI_RA007_Epitope_Rep3 1149.57062549929 1149.5695299358601 68.773 2 -0.008094319820912972 0.010981218034125585 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 131866 17221 VYDPATETW True PC9_epitope_Rep6 1080.4763907612798 1080.47528993586 78.831 2 -0.008103020430002193 0.010981218034125585 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 5160 18955 ALPDDLVEV True PC9_epitope_Rep6 969.5018772331299 969.50078993586 85.557 2 -0.008105193037137888 0.010981218034125585 0.9438714419765777 ['ENSG00000120756|ENST00000457734|PLS1'] 86311 4839 QQHDVQEL True PC9_epitope_Rep6 995.46722305991 995.46612993586 26.119 2 -0.008109387401229405 0.010981218034125585 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 34454 13942 GQATTAYFL True NCI_RA007_Epitope_Rep5 970.47599683846 970.47544496793 60.313 1 -0.00812160602337832 0.010981218034125585 0.9438714419765777 ['nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 103748 18640 SRFGKYFEI True PC9_epitope_Rep1 1145.58694426977 1145.58529490379 76.488 3 -0.008125645379416202 0.010981218034125585 0.9438714419765777 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'MYO1F|p.A217Pfs*12|1|0.18|ENSG00000142347|chr19:8551862-8551862|C/-|frameshift_variant', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 127599 11063 VQYNEPLKV True PC9_epitope_Rep6 1088.5866099165999 1088.58550993586 53.472 2 -0.008157723307532713 0.011001998409867417 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 135827 6476 YEQGPDTPVS True H1975_Epitope_Rep2 1091.4771190372699 1091.4760299358602 29.826 2 -0.00815925787945849 0.011001998409867417 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 6123 9773 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51340993586 42.546 2 -0.00816678874559814 0.011001998409867417 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 101722 21961 SPGTALILLEA True PC9_epitope_Rep2 1083.61757569171 1083.61646993586 89.951 2 -0.008177993601448774 0.011021828807150224 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 35380 14347 GTASGFYTV True PC9_epitope_Rep6 901.4181476091701 901.41704993586 67.083 2 -0.008212872143673094 0.011021828807150224 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 136387 13767 YHDYGHLEL True PC9_epitope_Rep1 1145.51417325233 1145.51251490379 57.799 3 -0.00821729972989548 0.011021828807150224 0.9438714419765777 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 70284 17403 LYPDHFHLL True PC9_epitope_Rep4 1153.59202965021 1153.59092993586 74.935 2 -0.00823378062643441 0.011021828807150224 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 48484 5502 KEFDGKSLVS True NCI_RA007_Epitope_Rep3 1108.5764391557198 1108.57534993586 28.644 2 -0.008241721756190885 0.011021828807150224 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000517330.1_1_5:77337712-77337985:-|nuORF', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 116633 9194 TYIEASGKSL True PC9_epitope_Rep4 1067.54989005471 1067.5487899358602 42.961 2 -0.008254567461265905 0.011021828807150224 0.9438714419765777 ['ENST00000590420.1_1_19:11685827-11688432:-|nuORF', 'ENSG00000102575|ENST00000648477|ACP5'] 95191 9082 SAAHAIVSV True PC9_epitope_Rep5 853.46576650793 853.46466993586 39.881 2 -0.008256414912599012 0.011021828807150224 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 89077 4189 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 21.231 3 -0.008307798647595512 0.011041178871393895 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 43345 18258 IHIPINNII True PC9_epitope_Rep6 1045.6284151589302 1045.62730993586 82.871 2 -0.008309446425703871 0.011041178871393895 0.9438714419765777 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G', 'ENST00000461536.1_1_7:54823470-54826890:-|nuORF'] 5169 20222 ALPEDLVEV True PC9_epitope_Rep4 983.5175272972699 983.51642993586 85.923 2 -0.00831508982685412 0.011041178871393895 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 91667 9744 RPGANLSL True PC9_epitope_Rep4 826.4661008611 826.4650099358599 45.117 2 -0.00831760346369231 0.011041178871393895 0.9438714419765777 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'nc|ENSG00000079385|P13688-3|CEACAM1', 'nc|ENSG00000079385|P13688-4|CEACAM1', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 87966 12521 QVRDVIIAA True PC9_epitope_Rep3 983.5763795860698 983.57528993586 53.187 2 -0.008330130599087942 0.011041178871393895 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 87902 13879 QVMQGMGVSA True PC9_epitope_Rep3 1006.4575869763398 1006.45648993586 58.466 2 -0.00834561102078071 0.011041178871393895 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 69691 14979 LVYEGQLSQA True PC9_epitope_Rep2 1106.56078909158 1106.5596899358602 62.873 2 -0.008350415333159611 0.011041178871393895 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 3080 15204 AGAGPLVGV True PC9_epitope_Rep2 739.42283906679 739.42229496793 63.745 1 -0.008353808453674847 0.011041178871393895 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 2720 5670 AETPGTVSP True H1975_Epitope_Rep2 857.41306222873 857.4125149679301 26.807 1 -0.008360207040416406 0.011041178871393895 0.9438714419765777 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 187 6023 AAETTLTELRR True H1975_Epitope_Rep3 1259.68336383575 1259.68171490379 28.181 3 -0.00844777183163497 0.011061471712702435 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 132864 17567 VYTSGIYNV True PC9_epitope_Rep1 1014.5022115863001 1014.50110993586 72.364 2 -0.008453143372667093 0.011061471712702435 0.9438714419765777 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3', 'nc|ENSG00000136205|Q68CZ2-4|TNS3'] 135272 23580 YAYPYIIDF True PC9_epitope_Rep3 1163.5539128059897 1163.55280993586 95.985 2 -0.008458503342650048 0.011061471712702435 0.9438714419765777 ['nc|ENSG00000170456|Q6ZUT9-3|DENND5B'] 63234 18593 LPAAMPITA True PC9_epitope_Rep1 883.48372507119 883.48317496793 76.305 1 -0.008466025649038193 0.011061471712702435 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant'] 84553 8622 QHAVGIVV True PC9_epitope_Rep6 821.47593726881 821.47484993586 42.981 2 -0.008509977966780857 0.011061471712702435 0.9438714419765777 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 125229 13787 VLQSALAAIR True PC9_epitope_Rep4 1040.6342288153598 1040.63312993586 60.927 2 -0.008575971387058465 0.011082474226804124 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 84949 21111 QHYPYFLIV True PC9_epitope_Rep2 1178.61243074162 1178.61132993586 86.663 2 -0.008577151238597355 0.011082474226804124 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 2657 6480 AETAAVTVA True H1975_Epitope_Rep3 831.43379767331 831.43270993586 29.893 2 -0.008603183447176168 0.011099899091826439 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 59432 15139 LGLTNQPEL True PC9_epitope_Rep3 983.52876068731 983.52766993586 63.37 2 -0.008619778601605543 0.011099899091826439 0.9438714419765777 ['ENSG00000179626|ENST00000641569|OR6C4'] 107083 15300 SYLTSASSL True PC9_epitope_Rep6 927.45492704071 927.45382993586 70.969 2 -0.008630273568624057 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 17582 14234 EHLNYVTEI True PC9_epitope_Rep4 1116.54513902744 1116.5440499358601 62.658 2 -0.008641497601909215 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF', 'ENST00000529698.1_1_11:46396583-46398763:+|nuORF'] 54916 8811 LAGPLRPAA True PC9_epitope_Rep3 864.5181364339599 864.51702993586 38.841 2 -0.008676000081642852 0.011099899091826439 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A'] 37854 5856 HDPSAVAV True PC9_epitope_Rep5 794.3922672145001 794.39116993586 27.517 2 -0.008689667592037384 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 36475 16329 GVISKTFQL True PC9_epitope_Rep4 991.57023157647 991.56912993586 70.772 2 -0.008699862110186838 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 58345 7021 LEVAKSLSA True H1975_Epitope_Rep2 916.5229470308799 916.52184993586 31.931 2 -0.008701118033035447 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 42427 15771 IEQEGYWLP True H1975_Epitope_Rep3 1133.53932537101 1133.53822993586 66.111 2 -0.008706760560812307 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 130465 17194 VTVPPGPSL True PC9_epitope_Rep5 865.49091862661 865.49037496793 71.157 1 -0.008710142487614505 0.011099899091826439 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 129176 6662 VTDEPLLK True H1975_Epitope_Rep2 913.5120479940099 913.51094993586 30.533 2 -0.008751449867636454 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 34867 15636 GQVGHILEL True PC9_epitope_Rep4 964.5341804209199 964.53308993586 68.069 2 -0.008765825814076386 0.011099899091826439 0.9438714419765777 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF', 'ENST00000432615.5_1_7:158447451-158457424:-|nuORF'] 116490 11192 TYDKGYQF True PC9_epitope_Rep5 1020.45526139388 1020.45416993586 48.038 2 -0.008825886375501489 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 41101 16117 HYMPPPYASL True PC9_epitope_Rep2 1174.5481162328997 1174.5470099358602 67.252 2 -0.008826210707756823 0.011099899091826439 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 23734 13465 EYIPKWEQF True NCI_RA007_Epitope_Rep5 1238.5971746003 1238.5960699358602 58.478 2 -0.008826751077638088 0.011099899091826439 0.9438714419765777 ['ENSG00000114405|ENST00000462069|C3orf14'] 35231 6861 GSHSMRYFY True NCI_RA007_Epitope_Rep3 1146.4916639859398 1146.49056993586 34.097 2 -0.008835672299802574 0.011099899091826439 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 47859 7701 IYTIDGSRK True NCI_RA007_Epitope_Rep2 1051.56620882519 1051.5651099358602 34.581 2 -0.008838914387834991 0.011099899091826439 0.9438714419765777 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2', 'nc|ENSG00000077279|O43602-2|DCX', 'nc|ENSG00000077279|O43602|DCX', 'ENSG00000077279|ENST00000636035|DCX'] 17160 15754 EHAEALLL True PC9_epitope_Rep1 894.4810822188999 894.48053496793 65.422 1 -0.008842300849033174 0.011120175174960285 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 33590 22449 GLLEELVTV True PC9_epitope_Rep4 971.5539128059899 971.55280993586 94.582 2 -0.008869602349499059 0.011120175174960285 0.9438714419765777 ['ENSG00000204839|ENST00000398882|MROH6', 'ENST00000533210.5_1_8:144649355-144650416:-|nuORF'] 116489 9852 TYDKGYQF True PC9_epitope_Rep4 1020.45526139388 1020.45416993586 45.545 2 -0.008892097976340862 0.011120175174960285 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 13995 4564 DRSKSYEL True PC9_epitope_Rep4 996.4876241513199 996.48652993586 24.053 2 -0.008897522012795034 0.011120175174960285 0.9438714419765777 ['ENSG00000100605|ENST00000267615|ITPK1', 'nc|ENSG00000100605|Q13572-2|ITPK1'] 95628 7387 SAVEPKTAL True PC9_epitope_Rep5 914.5072969667399 914.50618993586 33.371 2 -0.008909433666782214 0.011120175174960285 0.9438714419765777 ['nc|ENSG00000136153|Q8WWI1-3|LMO7', 'nc|ENSG00000136153|Q8WWI1-4|LMO7', 'nc|ENSG00000136153|Q8WWI1-2|LMO7', 'nc|ENSG00000136153|Q8WWI1|LMO7', 'ENST00000563635.5_1_13:76195947-76378681:+|nuORF', 'LMO7|p.E1615Vfs*12|1|0.26|ENSG00000136153|chr13:75855330-75855331|GA/-|frameshift_variant', 'ENSG00000136153|ENST00000377534|LMO7', 'nc|ENSG00000136153|Q8WWI1-5|LMO7'] 37848 5702 HDPSAVAV True PC9_epitope_Rep3 794.3922672145001 794.39116993586 27.005 2 -0.009008417287204066 0.011161912121407259 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 84072 9018 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57797496793 39.685 1 -0.009019349627868104 0.011161912121407259 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 128319 10578 VSDFGGRSL True PC9_epitope_Rep3 936.46649478392 936.46538993586 45.635 2 -0.00902703538474691 0.011161912121407259 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 34896 14905 GQVPPLQSV True PC9_epitope_Rep1 923.50763131991 923.50652993586 62.153 2 -0.009030767077054145 0.011161912121407259 0.9438714419765777 ['ENSG00000106351|ENST00000300176|AGFG2'] 47496 22311 IYLDGIITI True PC9_epitope_Rep4 1019.59029831471 1019.5897749679301 94.059 1 -0.00904542389001589 0.011161912121407259 0.9438714419765777 ['ENSG00000136682|ENST00000259199|ZNG1B', 'nc|ENSG00000172785|Q9BRT8-2|ZNG1A', 'ENSG00000147996|ENST00000382405|ZNG1E', 'ENSG00000172785|ENST00000356521|ZNG1A', 'ENSG00000196873|ENST00000360171|ZNG1C', 'ENSG00000215126|ENST00000377391|ZNG1F', 'ENST00000358604.7_1_2:114196636-114253317:+|nuORF', 'nc|ENSG00000172785|Q9BRT8-3|ZNG1A', 'ENST00000431099.3_1_9:160122-173274:-|nuORF', 'ENST00000495302.5_1_9:151417-166034:-|nuORF', 'ENST00000377445.5_9:69238165-69262487:-|nuORF', 'ENST00000492566.1_1_2:114195517-114220159:+|nuORF', 'ENST00000495626.2_9:69245151-69262487:-|nuORF', 'ENST00000476973.2_9:69243634-69261296:-|nuORF', 'ENST00000461037.2_9:69234942-69249581:-|nuORF', 'nc|ENSG00000215126|Q5RIA9-3|ZNG1E'] 26526 21514 FIVDPVSNL True PC9_epitope_Rep3 1002.53859709502 1002.53750993586 88.049 2 -0.00904615778218298 0.011181937200867083 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 105477 13956 SVATELNAV True PC9_epitope_Rep6 902.4709114580199 902.46980993586 65.535 2 -0.009058177269336717 0.011181937200867083 0.9438714419765777 ['ENSG00000003393|ENST00000264276|ALS2', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF', 'nc|ENSG00000003393|Q96Q42-2|ALS2', 'nc|ENSG00000003393|Q96Q42-3|ALS2', 'ENST00000482789.5_1_2:202606311-202633608:-|nuORF'] 9058 22757 AVITGFFTV True PC9_epitope_Rep5 953.5222187548899 953.52112993586 92.533 2 -0.009069089123542137 0.011181937200867083 0.9438714419765777 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 96835 10080 SESLIKQIP True H1975_Epitope_Rep2 1013.57571087973 1013.5746099358599 43.765 2 -0.009080523791343286 0.011181937200867083 0.9438714419765777 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF'] 70739 17111 MEALPLLAA True H1975_Epitope_Rep1 927.5099398190299 927.50884993586 71.249 2 -0.009084316471557871 0.011181937200867083 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 76126 10729 NRPPIASL True PC9_epitope_Rep5 866.49740098938 866.49630993586 46.261 2 -0.009094674665078498 0.011181937200867083 0.9438714419765777 ['ENSG00000118193|ENST00000367350|KIF14'] 1416 6543 AEEGPGVPAA True H1975_Epitope_Rep2 896.4239612655998 896.4234149679301 30.079 1 -0.009137012897420424 0.011198592667281659 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 133210 6317 WEDDKVTEA True H1975_Epitope_Rep3 1091.4771190372699 1091.4760299358602 29.293 2 -0.009138703096352015 0.011198592667281659 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 25292 16127 FEEDGLGVLP True H1975_Epitope_Rep2 1074.5233409536997 1074.52277496793 67.245 1 -0.009189140456190138 0.011198592667281659 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF'] 111521 21267 TLLRLLYEA True PC9_epitope_Rep1 1090.6386454894598 1090.63754993586 86.628 2 -0.009215298309966745 0.011198592667281659 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 109732 9739 THGPPVQL True PC9_epitope_Rep1 847.45520182423 847.45410993586 42.321 2 -0.009215717744069426 0.011198592667281659 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 118730 13144 VEDEFDLEA True H1975_Epitope_Rep2 1065.4502355830898 1065.4491299358601 55.68 2 -0.009239934063737026 0.011198592667281659 0.9438714419765777 ['nc|ENSG00000163950|Q14493-2|SLBP', 'ENSG00000163950|ENST00000489418|SLBP'] 130453 17700 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 73.28 2 -0.009260297771056367 0.011198592667281659 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 133718 19942 WLIEDGKVVTV True PC9_epitope_Rep5 1257.69688864157 1257.6957899358601 81.761 2 -0.00926568346612546 0.011198592667281659 0.9438714419765777 ['ENSG00000090273|ENST00000321265|NUDC', 'ENST00000437039.1_1_2:179319678-179320041:+|nuORF'] 33227 10495 GLAEAVLEA True H1975_Epitope_Rep2 871.4650978015899 871.46454496793 45.387 1 -0.00927582005623276 0.011198592667281659 0.9438714419765777 ['nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP'] 76589 5243 NTEGLHHLY True H1975_Epitope_Rep2 1082.5145076055 1082.5134099358602 25.234 2 -0.009292094918965519 0.011198592667281659 0.9438714419765777 ['nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B', 'nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B', 'ENSG00000275052|ENST00000616407|PPP4R3B', 'nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C', 'ENSG00000224960|ENST00000412172|PPP4R3C'] 7520 13251 ASETGFLTY True H1975_Epitope_Rep1 987.4549270407099 987.45382993586 56.066 2 -0.009310354623812907 0.011198592667281659 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000489905.1_1_6:33248421-33255161:-|nuORF'] 86280 8662 QQDPQQYNV True PC9_epitope_Rep4 1118.49925146418 1118.49814993586 40.809 2 -0.009340151735393905 0.011198592667281659 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 7015 19147 AQQVILVQV True PC9_epitope_Rep4 996.5967806774798 996.59568993586 81.744 2 -0.009354797404704341 0.011198592667281659 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF', 'nc|ENSG00000075420|Q53EP0-3|FNDC3B'] 125867 9307 VNRQAVAL True PC9_epitope_Rep5 869.5083000262498 869.50720993586 40.752 2 -0.009406106829803444 0.011198592667281659 0.9438714419765777 ['nc|ENSG00000198788|Q02817|MUC2'] 127598 13018 VQYNEPLKV True PC9_epitope_Rep5 1088.5866099165999 1088.58550993586 55.08 2 -0.009411222499841984 0.011198592667281659 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 1836 11952 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.48512993586 51.129 2 -0.009461938132805622 0.011198592667281659 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 139693 9412 YTTDRVMTV True PC9_epitope_Rep6 1084.5222954078802 1084.52118993586 46.421 2 -0.009488176113585415 0.011198592667281659 0.9438714419765777 ['ENSG00000116478|ENST00000373548|HDAC1', 'ENST00000523334.1_1_6:114270238-114277280:-|nuORF', 'ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2'] 100645 20455 SLQSIYTL True PC9_epitope_Rep2 923.4963979298699 923.49530993586 84.109 2 -0.009494436405965418 0.011198592667281659 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 74566 5064 NLDDNAQRY True H1975_Epitope_Rep2 1107.49450043691 1107.4934099358602 24.561 2 -0.009495778740640103 0.011198592667281659 0.9438714419765777 ['ENSG00000198113|ENST00000357503|TOR4A'] 67768 11837 LTGVEVEY True H1975_Epitope_Rep2 908.4491133842798 908.4485649679301 50.607 1 -0.009510819483956486 0.011198592667281659 0.9438714419765777 ['CON__Q0V8M9'] 1734 12612 AEGSEFWSA True H1975_Epitope_Rep2 982.4032258210199 982.40267496793 53.609 1 -0.009535146831314683 0.011218842507186065 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2'] 113180 12715 TQDGTPITV True PC9_epitope_Rep2 930.4658260775799 930.4652749679301 54.213 1 -0.009538830899612287 0.011218842507186065 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 86257 8484 QPYYATRVN True PC9_epitope_Rep5 1110.5458077337798 1110.54470993586 37.574 2 -0.0095436009182802 0.011218842507186065 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 138773 14544 YSDDIPHAL True PC9_epitope_Rep5 1029.47672511445 1029.47562993586 60.943 2 -0.009543741468387108 0.011218842507186065 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 26067 8782 FHDPDSAVV True PC9_epitope_Rep6 985.4505103666099 985.44940993586 43.677 2 -0.009547585741509075 0.011218842507186065 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 70803 10181 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42662993586 44.207 2 -0.009565494055378067 0.011238605898123324 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 8867 12032 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6971299358602 54.084 2 -0.009573666618045516 0.011238605898123324 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 36453 21763 GVIQDFINA True PC9_epitope_Rep3 975.5025459394699 975.50144993586 89.009 2 -0.009580674299902558 0.011238605898123324 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 76535 9342 NTDNNLAVY True H1975_Epitope_Rep3 1022.4668887067398 1022.46637496793 40.933 1 -0.009586950445025983 0.011238605898123324 0.9438714419765777 ['ENSG00000204019|ENST00000371894|CT83', 'CT83|p.D61Y|1|0.75|ENSG00000204019|chrX:116461902-116461902|C/A|missense_variant'] 126392 14885 VPLGPGQISA True PC9_epitope_Rep4 937.5232813840499 937.52218993586 65.192 2 -0.00962202895991796 0.011238605898123324 0.9438714419765777 ['nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 43731 21579 IITDFDMTL True PC9_epitope_Rep4 1067.52089842555 1067.52037496793 91.186 1 -0.009642690393444616 0.011238605898123324 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF', 'ENST00000461851.1_1_7:33061643-33066527:-|nuORF', 'ENST00000464840.5_1_7:33063600-33075596:-|nuORF'] 113424 13898 TQMNAELNYKV True PC9_epitope_Rep5 1309.6336367620102 1309.63252993586 58.478 2 -0.009644109782997654 0.011238605898123324 0.9438714419765777 ['ENSG00000139433|ENST00000318348|GLTP'] 34809 9397 GQTQVEIKV True PC9_epitope_Rep4 1000.5553097883198 1000.55420993586 43.753 2 -0.009658277209707704 0.01125932915844557 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000432228.1_1_2:222827655-222828180:+|nuORF'] 135385 4790 YDLNKPEAEPK True H1975_Epitope_Rep3 1302.6455813446998 1302.64393490379 23.552 3 -0.009670208997587533 0.01125932915844557 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 51980 11883 KLAPPLVTL True NCI_RA007_Epitope_Rep3 950.6164534929001 950.61534993586 53.868 2 -0.00973454872498563 0.01125932915844557 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 71136 19765 METVWTILP True H1975_Epitope_Rep2 1088.55761828744 1088.55707496793 81.999 1 -0.009747371814381624 0.01127835670483297 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 70483 19125 LYSPLAEQF True PC9_epitope_Rep6 1066.5335117145798 1066.5324099358602 86.214 2 -0.00976538887705093 0.01127835670483297 0.9438714419765777 ['ENSG00000103148|ENST00000611875|NPRL3'] 43511 18199 IIDDTIFNL True NCI_RA007_Epitope_Rep3 1062.55972646242 1062.5586299358602 79.703 2 -0.009770730989003447 0.01127835670483297 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 48794 8122 KEQVPGFTP True H1975_Epitope_Rep3 1001.5181960036098 1001.51708993586 36.218 2 -0.00978387596962663 0.01127835670483297 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 54022 12189 KYLPESNTL True PC9_epitope_Rep1 1063.55497543515 1063.5538699358601 51.743 2 -0.009797804281690844 0.01127835670483297 0.9438714419765777 ['ENST00000324677.11_1_17:28011643-28088245:-|nuORF', 'ENST00000269033.7_1_17:28011643-28257046:-|nuORF'] 6369 8005 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 35.767 2 -0.009805462331149595 0.01127835670483297 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 139596 6964 YTQKSLSLSPG True NCI_RA007_Epitope_Rep3 1179.6135529404298 1179.61244993586 34.5 2 -0.009824222407276165 0.01127835670483297 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1'] 62895 22315 LMSLIINTF True PC9_epitope_Rep4 1050.57835373202 1050.57777496793 94.074 1 -0.009829611760594912 0.01127835670483297 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 32092 8721 GEYGDSPVP True H1975_Epitope_Rep2 919.3923267841499 919.39177496793 38.506 1 -0.009838763643387222 0.01127835670483297 0.9438714419765777 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 44865 21701 IQAGLLSAL True PC9_epitope_Rep5 884.53311779176 884.53202993586 88.52 2 -0.009870234976331403 0.01127835670483297 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6', 'ENST00000553022.1_1_12:50146843-50152319:+|nuORF'] 23116 21769 EVLVIANSGL True PC9_epitope_Rep1 1013.5757108797299 1013.5746099358599 88.569 2 -0.00989734754940419 0.01129810269053489 0.9438714419765777 ['nc|ENSG00000182652|Q8NH05|OR4Q3', 'ENSG00000182652|ENST00000642117|OR4Q3'] 102412 15841 SPVVPQISA True PC9_epitope_Rep2 896.4967322830399 896.49618496793 66.191 1 -0.009897489253912912 0.01129810269053489 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 9040 22389 AVIGGLVYL True PC9_epitope_Rep5 903.5429541994699 903.54184993586 91.122 2 -0.009936974079340766 0.01129810269053489 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'MAGT1|p.R207T|1|0.83|ENSG00000102158|chrX:77856785-77856785|C/G|missense_variant'] 63804 8829 LPSQPPPAA True PC9_epitope_Rep3 876.4705175351999 876.46942993586 38.91 2 -0.00994697426332682 0.01129810269053489 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD'] 109998 7511 THTPSGLTV True PC9_epitope_Rep4 911.47124581119 911.47014993586 36.258 2 -0.00997642330094559 0.01129810269053489 0.9438714419765777 ['ENSG00000116685|ENST00000376572|KIAA2013', 'nc|ENSG00000116685|Q8IYS2-2|KIAA2013'] 116921 14662 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47107496793 61.4 1 -0.010002117601511418 0.01129810269053489 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 71844 18821 MPFGNVVSA True PC9_epitope_Rep4 920.4425885351999 920.44148993586 80.48 2 -0.010003653953707031 0.01129810269053489 0.9438714419765777 ['nc|ENSG00000149187|Q92879-5|CELF1', 'nc|ENSG00000149187|Q92879-2|CELF1', 'nc|ENSG00000149187|Q92879-3|CELF1', 'nc|ENSG00000149187|Q92879-6|CELF1', 'nc|ENSG00000149187|Q92879|CELF1', 'nc|ENSG00000149187|Q92879-4|CELF1', 'ENSG00000149187|ENST00000687097|CELF1'] 18658 6685 ELAVQIQK True H1975_Epitope_Rep3 927.53893144819 927.53782993586 30.668 2 -0.010023215972082646 0.01131808535722707 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3'] 5485 17648 AMLAVLHTV True PC9_epitope_Rep2 953.5368232732101 953.53572993586 73.163 2 -0.010027387010517832 0.01131808535722707 0.9438714419765777 ['ENSG00000123395|ENST00000336854|ATG101'] 63452 15654 LPGVDALSNI True H1975_Epitope_Rep3 997.5444107514501 997.54330993586 65.631 2 -0.010031921037005256 0.01131808535722707 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 36773 10036 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 43.595 2 -0.010045697744835047 0.01131808535722707 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 70153 17213 LYLEFLQKF True NCI_RA007_Epitope_Rep3 1199.6590465808697 1199.6579499358602 75.603 2 -0.010059059962776989 0.01131808535722707 0.9438714419765777 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 132060 17444 VYIHPSSALF True PC9_epitope_Rep4 1132.59169529704 1132.5905899358602 75.093 2 -0.010060264476032293 0.01131808535722707 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8'] 8330 19805 ATLPTTLGV True PC9_epitope_Rep1 871.5014833103099 871.5009349679301 80.995 1 -0.010071733641359633 0.011338062884454637 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 17537 7801 EHINSVSAM True PC9_epitope_Rep5 986.44913046762 986.44802993586 34.95 2 -0.010077268721694812 0.011338062884454637 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 31621 5298 GEGPPANPP True H1975_Epitope_Rep3 834.38718183406 834.38608993586 25.458 2 -0.010084485119904481 0.011338062884454637 0.9438714419765777 ['ENSG00000109686|ENST00000604030|SH3D19', 'nc|ENSG00000109686|Q5HYK7-3|SH3D19', 'nc|ENSG00000109686|Q5HYK7-2|SH3D19', 'nc|ENSG00000109686|Q5HYK7|SH3D19'] 117673 10983 VAKGGLGLI True PC9_epitope_Rep4 826.5276384884999 826.52654993586 50.021 2 -0.010084539273550124 0.011338062884454637 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10'] 3860 10156 AHAVGNVEL True PC9_epitope_Rep3 908.4715801643599 908.47048993586 44.018 2 -0.010097242729858897 0.011338062884454637 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ARHGAP15-KYNU|2|fusion', 'ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU', 'KYNU|p.F306Lfs*17|1|0.1|ENSG00000115919|chr2:143029640-143029640|T/-|frameshift_variant', 'KYNU-ARHGAP15|1|fusion'] 127328 7307 VQNGKVIGV True PC9_epitope_Rep3 912.5392658013598 912.53816993586 33.111 2 -0.010126210656045641 0.011338062884454637 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 24434 13236 FAGM[Oxidation]PITL True H1975_Epitope_Rep1 864.44152628648 864.4409749679301 56.01 1 -0.01016156430029466 0.011359008980046721 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 107257 7995 SYPRRFSTL True PC9_epitope_Rep6 1125.59309227937 1125.59143490379 40.217 3 -0.010165916997495007 0.011359008980046721 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 47693 21107 IYPTTYVQF True PC9_epitope_Rep5 1130.56481184286 1130.56427496793 86.253 1 -0.010199210398821186 0.011379953280041148 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 25618 7241 FETPSKLA True H1975_Epitope_Rep2 891.4701831820298 891.46908993586 32.786 2 -0.010203831716827047 0.011379953280041148 0.9438714419765777 ['ZNF770|p.K473Rfs*18|1|0.19|ENSG00000198146|chr15:34982017-34982017|T/-|frameshift_variant', 'ENSG00000198146|ENST00000356321|ZNF770'] 77809 19447 PAEPAFLA True PC9_epitope_Rep5 814.4225047136199 814.4219549679301 79.853 1 -0.010226667808254774 0.011400895784668795 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 27925 19549 FQNPFRSEL True PC9_epitope_Rep1 1136.56145779792 1136.56036993586 80.02 2 -0.01023321187355696 0.011400895784668795 0.9438714419765777 ['ENSG00000073050|ENST00000262887|XRCC1', 'XRCC1|p.D487Tfs*6|2|0.14|ENSG00000073050|chr19:43546074-43546074|C/-|frameshift_variant'] 83065 12788 PYLGSAVSL True H1975_Epitope_Rep3 905.4858332461699 905.48472993586 54.405 2 -0.010265547244556732 0.011419878730743684 0.9438714419765777 ['ENSG00000253309|ENST00000681248|SERPINE3', 'nc|ENSG00000253309|A8MV23|SERPINE3'] 40495 15218 HSEVVAIL True PC9_epitope_Rep1 866.4861675993399 866.48506993586 63.356 2 -0.010296304112687917 0.011419878730743684 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 69266 19655 LVPDVVNEV True PC9_epitope_Rep3 982.53351171458 982.53240993586 80.838 2 -0.010298942077305728 0.011419878730743684 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 24579 20695 FALSGPLFL True H1975_Epitope_Rep2 963.5429541994699 963.54184993586 85.71 2 -0.010301346281174266 0.011419878730743684 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 103657 9909 SRDPHTEFTL True PC9_epitope_Rep4 1201.57275075761 1201.57111490379 45.765 3 -0.010311911416315267 0.011419878730743684 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'COL12A1|p.Y484C|1|0.34|ENSG00000111799|chr6:75183490-75183490|T/C|missense_variant'] 77806 19539 PAEPAFLA True PC9_epitope_Rep3 814.4225047136199 814.42140993586 80.389 2 -0.010316322808323626 0.011419878730743684 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 107716 17497 TALLKIEGV True PC9_epitope_Rep5 942.57498260374 942.57388993586 72.305 2 -0.010354213558962468 0.011419878730743684 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 105109 18387 STLPDVTEV True PC9_epitope_Rep1 959.48114178855 959.4805949679301 75.516 1 -0.010431081048497338 0.011419878730743684 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 118647 9204 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48472993586 40.357 2 -0.010447609663271263 0.011419878730743684 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 11617 11363 DHARTITVAL True PC9_epitope_Rep2 1095.60365696307 1095.60254993586 49.03 2 -0.01045224959143717 0.011419878730743684 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 34784 12836 GQTEVFQAL True NCI_RA007_Epitope_Rep3 991.4974605590297 991.49636993586 57.735 2 -0.010499611473818013 0.011438853544116702 0.9438714419765777 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'ENST00000574957.1_1_16:3074279-3075849:+|nuORF', 'ENST00000576143.5_1_16:3074279-3076060:+|nuORF', 'ENST00000571046.1_1_16:3074279-3076290:+|nuORF', 'ENST00000574498.5_1_16:3074279-3076221:+|nuORF'] 109731 9643 THGPPVQL True PC9_epitope_Rep1 847.45520182423 847.45410993586 41.947 2 -0.010513324427308596 0.011438853544116702 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 32716 6979 GHSGPITSI True PC9_epitope_Rep6 867.4450310633501 867.44392993586 35.813 2 -0.010537934096598874 0.011438853544116702 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF', 'PRPF19|p.F388L|1|0.17|ENSG00000110107|chr11:60898250-60898250|A/G|missense_variant'] 32001 13135 GETIFVTAP True NCI_RA007_Epitope_Rep5 933.48074786573 933.4801949679301 57.2 1 -0.010540588418708427 0.011438853544116702 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 109734 8783 THGPPVQL True PC9_epitope_Rep2 847.45520182423 847.45410993586 39.137 2 -0.01054629536404764 0.011438853544116702 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 82713 6725 PVPPPRAPL True NCI_RA007_Epitope_Rep2 942.5650866263799 942.56398993586 30.773 2 -0.010567472799061504 0.011438853544116702 0.9438714419765777 ['ENST00000491612.1_1_22:46751804-46751987:+|nuORF', 'ENST00000470831.1_1_22:46751804-46752900:+|nuORF'] 105435 12467 SVALVIHNV True PC9_epitope_Rep6 950.5549158655001 950.55380993586 59.38 2 -0.010571284055799183 0.011438853544116702 0.9438714419765777 ['ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2'] 34549 5871 GQFDHGSGSL True NCI_RA007_Epitope_Rep3 1003.4359229316299 1003.43482993586 30.072 2 -0.010577543887900635 0.011438853544116702 0.9438714419765777 ['THRAP3|p.T757Nfs*6|1|0.26|ENSG00000054118|chr1:36296730-36296731|-/A|frameshift_variant', 'ENSG00000054118|ENST00000354618|THRAP3'] 27019 24242 FLLPILSQI True PC9_epitope_Rep3 1042.64266824074 1042.6415699358602 98.549 2 -0.010603545505663921 0.011438853544116702 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X', 'ENST00000463199.1_1_Y:15025644-15026909:+|nuORF', 'nc|ENSG00000067048|O15523-3|DDX3Y', 'ENST00000472510.5_1_Y:15024878-15026576:+|nuORF'] 73332 12434 NELNGIVGG True PC9_epitope_Rep2 871.4399456829099 871.4393949679301 53.134 1 -0.010603888145035314 0.011438853544116702 0.9438714419765777 ['ENSG00000144815|ENST00000273347|NXPE3'] 47980 5531 KAFSQSTSL True NCI_RA007_Epitope_Rep3 967.49746055903 967.49636993586 28.753 2 -0.010619575527736331 0.011458065621519747 0.9438714419765777 ['ENSG00000179195|ENST00000337815|ZNF664'] 86814 18152 QRPGIEDVAVL True PC9_epitope_Rep3 1195.6560864587498 1195.6549899358602 75.022 2 -0.010645290799976916 0.011458065621519747 0.9438714419765777 ['ENSG00000102189|ENST00000322349|EEA1'] 37991 9589 HEGPVWQV True H1975_Epitope_Rep3 950.46101548066 950.4604649679301 41.896 1 -0.010667997089733781 0.011458065621519747 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 465 9217 AAMKALQAL True NCI_RA007_Epitope_Rep5 915.5211732090698 915.52006993586 42.104 2 -0.010674701331708046 0.011458065621519747 0.9438714419765777 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'ENST00000521451.5_1_8:74528012-74659064:-|nuORF'] 118098 8674 VATVSLPR True PC9_epitope_Rep4 841.5021520166499 841.50104993586 40.854 2 -0.010704056990784921 0.011458065621519747 0.9438714419765777 ['CON__P00761'] 26342 12903 FIFSDTHEL True NCI_RA007_Epitope_Rep4 1107.52367530687 1107.52256993586 56.72 2 -0.010710047135492222 0.011458065621519747 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 119936 6187 VEYETYKEAQA True H1975_Epitope_Rep2 1329.60886148281 1329.60776993586 28.768 2 -0.010727579020000896 0.011458065621519747 0.9438714419765777 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 59866 15529 LHGNIITSL True PC9_epitope_Rep2 966.54983048506 966.54872993586 65.005 2 -0.01076236352600203 0.011458065621519747 0.9438714419765777 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF', 'CEP97|p.V352Lfs*3|1|0.33|ENSG00000182504|chr3:101757658-101757658|G/-|frameshift_variant'] 106789 20727 SYGDILHVI True PC9_epitope_Rep3 1015.53384606775 1015.53274993586 84.994 2 -0.010777592935724339 0.011458065621519747 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 17237 9593 EHALGTPEV True PC9_epitope_Rep3 951.4661604307499 951.46506993586 41.852 2 -0.010799388179928036 0.011475304545162603 0.9438714419765777 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX', 'nc|ENSG00000114439|Q8WY36-3|BBX'] 26180 15425 FHSDPQHWL True PC9_epitope_Rep3 1165.53049202281 1165.52884490379 64.487 3 -0.010814014716204147 0.011475304545162603 0.9438714419765777 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 48483 11664 KEFAAIVDV True NCI_RA007_Epitope_Rep4 990.5385970950198 990.53750993586 51.824 2 -0.010823384717680906 0.011475304545162603 0.9438714419765777 ['ENST00000572732.1_1_16:11785059-11785929:-|nuORF', 'ENSG00000153066|ENST00000283033|TXNDC11', 'nc|ENSG00000153066|Q6PKC3|TXNDC11'] 72688 14324 MYKLSSEQF True PC9_epitope_Rep2 1131.52704643515 1131.5259499358601 60.361 2 -0.010824431760078605 0.011475304545162603 0.9438714419765777 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 21199 16811 ERFEIPIKV True PC9_epitope_Rep4 1129.6495445263297 1129.64788490379 72.635 3 -0.010837789599374687 0.011475304545162603 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 101597 9021 SPFAEGTSA True PC9_epitope_Rep2 865.38176210045 865.3806699358599 40.049 2 -0.010880414224201886 0.011475304545162603 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 95633 14447 SAVGQFVSL True NCI_RA007_Epitope_Rep5 906.4810822188999 906.47998993586 62.251 2 -0.010894900107952783 0.011475304545162603 0.9438714419765777 ['nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1', 'nc|ENSG00000185024|Q92994-6|BRF1', 'nc|ENSG00000185024|Q92994-4|BRF1'] 90341 17052 RIIDVVYNA True PC9_epitope_Rep1 1061.58694426977 1061.58637496793 70.416 1 -0.010925784532410627 0.011475304545162603 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 117848 9245 VAPEEHPVLL True NCI_RA007_Epitope_Rep3 1102.60225998074 1102.60116993586 43.466 2 -0.010928688131910981 0.011475304545162603 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196604|ENST00000409914|POTEF'] 95476 14269 SAMEVVPAL True NCI_RA007_Epitope_Rep4 915.4735543103099 915.47300496793 62.177 1 -0.010936093127331856 0.011475304545162603 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 39760 7529 HPYPPGPGV True PC9_epitope_Rep2 919.4552018242299 919.45410993586 34.328 2 -0.010944357911742779 0.011475304545162603 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 53340 5694 KTQNFLIQK True NCI_RA007_Epitope_Rep4 1118.64479349906 1118.64368993586 28.514 2 -0.010992072391589237 0.011475304545162603 0.9438714419765777 ['ENSG00000142867|ENST00000648566|BCL10'] 123728 8053 VIQSLSNTRNS True H1975_Epitope_Rep3 1217.6364136433301 1217.63530993586 35.95 2 -0.010992903159773562 0.011475304545162603 0.9438714419765777 ['USP19|p.E520Nfs*21|2|0.33|ENSG00000172046|chr3:49115465-49115465|C/-|frameshift_variant'] 115684 21984 TVLDAIYEV True PC9_epitope_Rep3 1021.53317736141 1021.53208993586 89.861 2 -0.010994511494530663 0.011475304545162603 0.9438714419765777 ['ENSG00000180346|ENST00000603357|TIGD2'] 37847 5865 HDPSAVAV True PC9_epitope_Rep1 794.3922672145001 794.39116993586 27.376 2 -0.011009975638195772 0.011475304545162603 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 36818 20666 GVPQALFGV True PC9_epitope_Rep4 886.4912529797799 886.49070496793 87.65 1 -0.011023319168203045 0.011475304545162603 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 30813 9754 GAPQVVAVTG True PC9_epitope_Rep2 897.4919812557698 897.49088993586 42.857 2 -0.011023339843061374 0.011475304545162603 0.9438714419765777 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF'] 25645 12022 FEWENKVTV True NCI_RA007_Epitope_Rep5 1150.56587447202 1150.56476993586 52.903 2 -0.011048441392487581 0.01149572924025432 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526527.1_1_11:14481741-14482839:-|nuORF'] 44990 17082 IQINVGTTV True PC9_epitope_Rep4 943.53384606775 943.53329496793 73.702 1 -0.011052310686448609 0.01149572924025432 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant', 'ENST00000469182.1_1_6:31610750-31613330:-|nuORF'] 9411 7142 AVVIVDDR True PC9_epitope_Rep4 885.4919812557699 885.49088993586 34.748 2 -0.011083744024271402 0.01149572924025432 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 6266 5265 APRPPVSAA True PC9_epitope_Rep1 864.4817509252399 864.48064993586 25.098 2 -0.011137856820482447 0.01149572924025432 0.9438714419765777 ['ENST00000494757.5_1_17:38375603-38434474:+|nuORF', 'ENSG00000171475|ENST00000323571|WIPF2'] 99763 19588 SLGLPLLW True H1975_Epitope_Rep2 897.53238951577 897.53184496793 81.277 1 -0.0111920905990272 0.011536321219125893 0.9438714419765777 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'nc|ENSG00000133816|O94851-2|MICAL2', 'ENST00000530691.5_1_11:12229562-12281716:+|nuORF'] 102251 12523 SPTGGFVDA True PC9_epitope_Rep3 849.3868474808899 849.38574993586 53.194 2 -0.011204216045487513 0.011536321219125893 0.9438714419765777 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 48389 4733 KEAVTTIAA True NCI_RA007_Epitope_Rep5 902.5072969667399 902.50618993586 24.89 2 -0.01120435516129561 0.011536321219125893 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 25883 15113 FGIDRDAIAQA True PC9_epitope_Rep2 1175.59348620219 1175.5923899358602 63.389 2 -0.011221872623063725 0.011536321219125893 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53259774-53260053:-|nuORF'] 42818 17886 IFKPPDPDNTF True PC9_epitope_Rep1 1289.62920300457 1289.62810993586 73.591 2 -0.011224289069417599 0.011536321219125893 0.9438714419765777 ['ENSG00000165943|ENST00000298894|MOAP1'] 83126 19189 PYPQYFTQL True PC9_epitope_Rep6 1155.5600608155898 1155.5589699358602 86.462 2 -0.011249911119085906 0.011536321219125893 0.9438714419765777 ['ENSG00000103160|ENST00000219439|HSDL1'] 101613 22570 SPFFPLVSA True PC9_epitope_Rep2 963.5065686907499 963.50546993586 92.309 2 -0.011251671426525714 0.011536321219125893 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 62647 22425 LLVSLLEHL True PC9_epitope_Rep1 1035.63283183303 1035.6317299358602 91.077 2 -0.011261128757769153 0.011536321219125893 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1', 'ENST00000461493.1_1_7:6089476-6098783:-|nuORF'] 137204 21266 YLEDGFAYV True PC9_epitope_Rep2 1075.48622716899 1075.4851299358602 87.26 2 -0.011265053323472008 0.011536321219125893 0.9438714419765777 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 39273 17952 HLPEELAEL True PC9_epitope_Rep4 1049.53932537101 1049.53822993586 77.105 2 -0.011281109560797224 0.011555251219720963 0.9438714419765777 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 46442 16203 ITLPVLHSA True PC9_epitope_Rep4 949.55966689277 949.55856993586 70.27 2 -0.011282475137873766 0.011555251219720963 0.9438714419765777 ['ENST00000430145.3_1_19:49166463-49183997:+|nuORF', 'ENSG00000176920|ENST00000425340|FUT2'] 5919 12940 APHPPLSVV True PC9_epitope_Rep1 915.51780208079 915.51670993586 54.646 2 -0.011330386648630468 0.011555251219720963 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 76938 16439 NVPDSFNEV True PC9_epitope_Rep2 1019.45598966987 1019.4554749679301 68.474 1 -0.011388265178155473 0.011555251219720963 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 5698 13742 APAPVIISS True PC9_epitope_Rep2 853.49091862661 853.48982993586 58.146 2 -0.01140394843729111 0.011555251219720963 0.9438714419765777 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'ENST00000490546.1_1_1:31439047-31452930:-|nuORF'] 109547 5990 THAPATLEA True PC9_epitope_Rep3 909.45559574705 909.45448993586 28.094 2 -0.011417811641010337 0.011555251219720963 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 121989 5663 VGQDPVLR True PC9_epitope_Rep2 882.49231560894 882.49120993586 27.17 2 -0.011423438012039218 0.011555251219720963 0.9438714419765777 ['ENSG00000106028|ENST00000265304|SSBP1', 'ENST00000489378.5_1_7:141438966-141445458:+|nuORF'] 108998 9105 TEVLKTHGLLV True NCI_RA007_Epitope_Rep5 1208.71287305888 1208.71123490379 41.675 3 -0.011424894375415922 0.011555251219720963 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A'] 2422 4447 AEQLRDEEVHA True H1975_Epitope_Rep3 1295.6105928183101 1295.6089349037902 22.228 3 -0.01142847595086217 0.011555251219720963 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 70838 4255 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep2 916.4688036634798 916.46770993586 21.476 2 -0.011437705079111984 0.011555251219720963 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 645 10202 AATKIINEV True PC9_epitope_Rep5 957.54949613189 957.54838993586 44.231 2 -0.011441724461714271 0.011576154405785938 0.9438714419765777 ['GNL3-MANF|1|fusion', 'ENST00000470900.1_1_3:51423580-51426517:+|nuORF', 'ENSG00000145050|ENST00000528157|MANF', 'ENST00000482262.1_1_3:51425158-51426517:+|nuORF', 'ENST00000446668.5_1_3:51424348-51426517:+|nuORF'] 31559 9462 GEFRQGLISA True NCI_RA007_Epitope_Rep2 1076.56145779792 1076.56036993586 41.416 2 -0.011443266010793558 0.011576154405785938 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 112905 13918 TPQEKIFIAA True PC9_epitope_Rep2 1116.6179100448799 1116.6168099358601 58.814 2 -0.011449547698307158 0.011595815237157955 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7', 'ENST00000505692.1_1_4:122780107-122782831:-|nuORF', 'ENST00000502444.1_1_4:122782546-122791468:-|nuORF'] 108285 4434 TEAVPRAPA True H1975_Epitope_Rep3 910.4872302284998 910.48612993586 22.177 2 -0.011452446213117173 0.011595815237157955 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 75495 23370 NQIPGLIWI True PC9_epitope_Rep2 1052.60186605792 1052.6007699358602 95.367 2 -0.011453474070624765 0.011595815237157955 0.9438714419765777 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000493208.1_1_5:131825047-131826375:-|nuORF', 'ENSG00000125347|ENST00000245414|IRF1'] 2737 12978 AETVNAFLA True H1975_Epitope_Rep2 934.4759968384599 934.47488993586 55.036 2 -0.011468176890663139 0.011595815237157955 0.9438714419765777 ['ENST00000343470.8_2_4:4283598-4285408:-|nuORF'] 1728 10364 AEGRIIWPA True H1975_Epitope_Rep1 1011.5501648382299 1011.54906993586 44.813 2 -0.011474596860967733 0.011595815237157955 0.9438714419765777 ['ENST00000457895.6_2_19:19516611-19516803:+|nuORF'] 76784 14419 NVDGHLYEL True PC9_epitope_Rep4 1058.5032742154601 1058.5021699358601 63.371 2 -0.01147580737886451 0.011595815237157955 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1', 'ENST00000510566.1_1_4:41263775-41266241:+|nuORF'] 48331 7361 KDSPSVWAA True H1975_Epitope_Rep3 959.4712458111899 959.47014993586 33.289 2 -0.011486858516656234 0.011595815237157955 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 6124 9659 APNLQNQQV True PC9_epitope_Rep3 1010.5145076055 1010.51397496793 42.103 1 -0.011507529005860887 0.011616961191219887 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 26823 10725 FLEGVGIR True NCI_RA007_Epitope_Rep2 889.5021520166499 889.50104993586 46.318 2 -0.011543607131015704 0.01165925038507616 0.9438714419765777 ['ENSG00000101331|ENST00000452892|CCM2L'] 110756 5140 TKKKVFETL True NCI_RA007_Epitope_Rep4 1092.6542955536 1092.6531899358602 26.291 2 -0.011562562083889675 0.01165925038507616 0.9438714419765777 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1'] 25200 8584 FEADPPGQVA True H1975_Epitope_Rep2 1029.47672511445 1029.4761749679299 37.972 1 -0.011594173119990054 0.011677395897940415 0.9438714419765777 ['ENST00000393987.2_1_6:43193473-43193632:-|nuORF', 'ENSG00000112667|ENST00000230431|DNPH1'] 132919 17277 VYTVVDEMF True NCI_RA007_Epitope_Rep5 1101.5052483614097 1101.5041499358601 73.23 2 -0.011623895282629877 0.011677395897940415 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 27712 16524 FQDPSVTQL True PC9_epitope_Rep6 1033.50802524273 1033.5069299358602 75.997 2 -0.011654786528118272 0.011677395897940415 0.9438714419765777 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000563829.5_1_15:75146292-75165596:-|nuORF'] 88437 4437 QYTHKIYHL True NCI_RA007_Epitope_Rep3 1201.6243924076498 1201.6227449037901 24.251 3 -0.011670508912579718 0.011677395897940415 0.9438714419765777 ['PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion', 'ENSG00000174238|ENST00000313486|PITPNA', 'ENST00000471825.1_1_22:28306950-28315179:-|nuORF', 'ENST00000460566.5_1_22:28293057-28315179:-|nuORF', 'ENSG00000180957|ENST00000335272|PITPNB', 'nc|ENSG00000180957|P48739-2|PITPNB', 'nc|ENSG00000180957|P48739-3|PITPNB'] 70851 4601 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 22.82 2 -0.011712357157931645 0.011677395897940415 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 130598 10237 VVADETPAV True PC9_epitope_Rep4 899.4600124211499 899.45890993586 47.055 2 -0.011720118903852153 0.011677395897940415 0.9438714419765777 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 88069 18720 QVVGGIYGV True PC9_epitope_Rep5 890.4861675993399 890.48506993586 77.024 2 -0.011723982135842718 0.011677395897940415 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 52846 5556 KQYAGKYVL True NCI_RA007_Epitope_Rep5 1068.59678067748 1068.59568993586 28.057 2 -0.011734843806320817 0.011677395897940415 0.9438714419765777 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 136147 13348 YGGPVGAGI True PC9_epitope_Rep4 789.4021036222099 789.4015549679301 59.245 1 -0.011738380136104273 0.011677395897940415 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7'] 17388 17633 EHFDRILEM True PC9_epitope_Rep5 1188.5597435457598 1188.55810490379 72.836 3 -0.01174479994969233 0.011677395897940415 0.9438714419765777 ['ENST00000576646.7_1_17:1412470-1416845:-|nuORF', 'nc|ENSG00000132376|Q9BT40-2|INPP5K', 'ENST00000350761.9_1_17:1399119-1419845:-|nuORF', 'ENSG00000132376|ENST00000421807|INPP5K'] 104343 9034 SSEVIKDANLY True H1975_Epitope_Rep3 1237.6190322436898 1237.61792993586 39.744 2 -0.011751382148805068 0.011677395897940415 0.9438714419765777 ['ENSG00000066044|ENST00000407627|ELAVL1', 'nc|ENSG00000066044|Q15717-2|ELAVL1'] 6710 5107 AQDEERQASL True PC9_epitope_Rep5 1145.53127986845 1145.53018993586 24.67 2 -0.0117587552071758 0.011677395897940415 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT'] 124181 11454 VLADVIDN True H1975_Epitope_Rep3 857.44944773745 857.4488949679301 49.177 1 -0.011763678648238724 0.011677395897940415 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 132228 19109 VYKPVSIYL True PC9_epitope_Rep3 1080.6219327961599 1080.62082993586 78.726 2 -0.011876651041262034 0.011698282683547553 0.9438714419765777 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 60617 10033 LISQLVSS True H1975_Epitope_Rep3 845.48583324617 845.48528496793 43.627 1 -0.011882783600370697 0.011698282683547553 0.9438714419765777 ['ENST00000577035.5_1_17:7144758-7144931:-|nuORF'] 128777 5961 VSQVGKEL True PC9_epitope_Rep1 858.4810822188998 858.47998993586 27.743 2 -0.011931441800140162 0.011740050894938306 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 23535 16837 EWSPYTKIFQF True NCI_RA007_Epitope_Rep3 1444.7027022979998 1444.70160993586 74.099 2 -0.011953312849141827 0.011740050894938306 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 9970 16597 AYSIVAGVF True NCI_RA007_Epitope_Rep4 925.4909186266099 925.49037496793 71.957 1 -0.011978022387216942 0.011740050894938306 0.9438714419765777 ['ENSG00000051523|ENST00000261623|CYBA', 'ENST00000562209.1_1_16:88713507-88717421:-|nuORF', 'ENST00000566534.5_1_16:88713161-88717421:-|nuORF'] 69264 19727 LVPDVVNEV True PC9_epitope_Rep1 982.53351171458 982.53240993586 80.707 2 -0.011998793241466882 0.011740050894938306 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 58268 6631 LETAVGAA True H1975_Epitope_Rep2 730.3861192049 730.3855749679301 30.414 1 -0.0120093009552442 0.01175942357443715 0.9438714419765777 ['ENST00000475550.5_1_2:64069329-64114799:+|nuORF', 'nc|ENSG00000169764|Q16851-2|UGP2', 'ENSG00000169764|ENST00000337130|UGP2'] 34715 15608 GQMIFAQAL True NCI_RA007_Epitope_Rep5 977.5004377644899 977.49934993586 66.745 2 -0.012014164794330767 0.01175942357443715 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 87904 13796 QVMQGMGVSA True PC9_epitope_Rep5 1006.4575869763398 1006.45648993586 58.085 2 -0.012037852199798152 0.01175942357443715 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 123110 20151 VHCGIIEPLM True PC9_epitope_Rep1 1110.55657274162 1110.5554699358602 82.341 2 -0.012057902872196229 0.01175942357443715 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 34606 9998 GQHPNIITL True NCI_RA007_Epitope_Rep4 991.5450794577899 991.5445349679301 45.302 1 -0.012070556705743937 0.01175942357443715 0.9438714419765777 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'nc|ENSG00000117676|Q15418-3|RPS6KA1', 'RPS6KA6|p.R473P|1|0.56|ENSG00000072133|chrX:84105824-84105824|C/G|missense_variant', 'ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF', 'nc|ENSG00000117676|Q15418-4|RPS6KA1', 'ENSG00000117676|ENST00000374168|RPS6KA1', 'nc|ENSG00000117676|Q15418-2|RPS6KA1', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 23488 18743 EWASRFWLW True NCI_RA007_Epitope_Rep3 1279.61382772395 1279.6127299358602 81.955 2 -0.012072959055863601 0.01175942357443715 0.9438714419765777 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1'] 68868 10944 LVEEPQNLIK True NCI_RA007_Epitope_Rep1 1181.6655885132898 1181.66448993586 46.563 2 -0.01211649231881806 0.01175942357443715 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 114013 11240 TRMGIGDEAV True PC9_epitope_Rep1 1047.5018943164698 1047.5007899358602 48.114 2 -0.012130698016356346 0.01175942357443715 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000494718.5_1_X:51643260-51645023:+|nuORF'] 135282 16101 YAYTGVLQL True H1975_Epitope_Rep2 1026.53859709502 1026.53750993586 67.142 2 -0.012175036662442308 0.011779041429731926 0.9438714419765777 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4', 'KLHL4|p.Q238H|1|0.86|ENSG00000102271|chrX:87614557-87614557|G/T|missense_variant'] 108466 9580 TEEPLEVSA True H1975_Epitope_Rep2 973.4604063439699 973.45930993586 41.825 2 -0.012183431218139482 0.011779041429731926 0.9438714419765777 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1', 'ALMS1|p.T1762Qfs*17|1|0.45|ENSG00000116127|chr2:73451811-73451811|A/-|frameshift_variant', 'ALMS1|p.R2599Dfs*14|2|0.23|ENSG00000116127|chr2:73489754-73489754|A/-|frameshift_variant'] 88745 4780 RDFEAQAAA True NCI_RA007_Epitope_Rep4 977.4566583762097 977.45556993586 24.823 2 -0.012204830319266056 0.011779041429731926 0.9438714419765777 ['ENSG00000105472|ENST00000250340|CLEC11A'] 11698 6248 DHFASVHSV True PC9_epitope_Rep2 997.46174375665 997.46064993586 29.43 2 -0.012206266295065014 0.011779041429731926 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 9654 19927 AYGLVSATF True PC9_epitope_Rep4 927.47018318203 927.46963496793 84.783 1 -0.012242993247249758 0.011779041429731926 0.9438714419765777 ['ENSG00000156875|ENST00000370152|MFSD14A'] 96684 7076 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.41776993586 32.185 2 -0.012253078964196442 0.011779041429731926 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 39889 4829 HQISQQTQL True NCI_RA007_Epitope_Rep4 1081.55162139021 1081.5505299358601 25.009 2 -0.012255415586605313 0.011779041429731926 0.9438714419765777 ['RC3H1|p.P1010Tfs*14|1|0.12|ENSG00000135870|chr1:173943550-173943551|-/G|frameshift_variant', 'nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 133301 9383 WEQANVLRP True H1975_Epitope_Rep2 1111.57744221523 1111.5763499358602 41.054 2 -0.012279838523051192 0.011799157813735759 0.9438714419765777 ['ENST00000576250.5_1_16:3109019-3109328:-|nuORF'] 101736 14740 SPHGIIVIA True PC9_epitope_Rep1 905.5334521449299 905.53234993586 61.516 2 -0.012312727076096416 0.011799157813735759 0.9438714419765777 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 1546 10309 AEEVFQHIP True H1975_Epitope_Rep2 1068.5240096600398 1068.52290993586 44.66 2 -0.012342601111083875 0.011799157813735759 0.9438714419765777 ['ENSG00000067704|ENST00000366922|IARS2', 'ENST00000467924.1_1_1:220313569-220316509:+|nuORF'] 63810 11090 LPSRFIESA True PC9_epitope_Rep6 1018.5447451046199 1018.54364993586 53.582 2 -0.012351291769264059 0.011799157813735759 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 37988 9756 HEGPVWQV True H1975_Epitope_Rep2 950.46101548066 950.4604649679301 42.515 1 -0.012352036040275965 0.011799157813735759 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 96938 6385 SEVATLTAAGK True NCI_RA007_Epitope_Rep2 1046.5607890915799 1046.5596899358602 29.444 2 -0.012414727441930342 0.011816744305312193 0.9438714419765777 ['nc|ENSG00000165629|P36542-2|ATP5F1C', 'ENST00000493053.5_1_10:7830135-7848940:+|nuORF', 'ENSG00000165629|ENST00000356708|ATP5F1C', 'ENST00000472202.1_1_10:7830197-7841158:+|nuORF'] 55338 20470 LASDRYGLLAF True PC9_epitope_Rep5 1224.65027280232 1224.64916993586 83.774 2 -0.012419827127739706 0.011816744305312193 0.9438714419765777 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 37044 18035 GVSDVDYSL True PC9_epitope_Rep3 953.43419159613 953.43364496793 74.573 1 -0.012427722373191775 0.011816744305312193 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 121571 5647 VGKSTATLP True NCI_RA007_Epitope_Rep2 872.4967322830399 872.49562993586 26.58 2 -0.012472486682261738 0.011816744305312193 0.9438714419765777 ['ENSG00000133019|ENST00000676153|CHRM3', 'chr1:239629539-239632224|442|11.63|0.02|9.23|+|ENST00000255380|CHRM3,CHRM3'] 17167 14123 EHAEALLL True PC9_epitope_Rep4 894.4810822188999 894.48053496793 62.229 1 -0.012481145677805519 0.011816744305312193 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 5158 20106 ALPDDLVEV True PC9_epitope_Rep4 969.5018772331299 969.50078993586 85.472 2 -0.012503440877223378 0.011816744305312193 0.9438714419765777 ['ENSG00000120756|ENST00000457734|PLS1'] 20208 12885 ENTLQLVRNI True H1975_Epitope_Rep1 1198.6669854956199 1198.6658899358602 54.633 2 -0.012505002032135568 0.011816744305312193 0.9438714419765777 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 131334 11720 VVRNEQVEI True PC9_epitope_Rep6 1084.58767254576 1084.58656993586 56.227 2 -0.012513906110015348 0.011816744305312193 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 46170 10305 ITDEEELNDY True H1975_Epitope_Rep2 1239.51429239163 1239.51318993586 44.644 2 -0.012523658041215914 0.011816744305312193 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 85998 21889 QPILLELEA True PC9_epitope_Rep3 1024.580461907 1024.57936993586 89.501 2 -0.012527792168637197 0.011816744305312193 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 105839 18968 SVISQSTLV True PC9_epitope_Rep2 932.51786165044 932.51676993586 78.324 2 -0.012571938734945566 0.011816744305312193 0.9438714419765777 ['ENST00000540013.5_1_11:94212913-94219150:-|nuORF'] 58010 7068 LERDPIPAA True H1975_Epitope_Rep3 980.5290950404798 980.52798993586 32.154 2 -0.012574809644390707 0.011816744305312193 0.9438714419765777 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000493232.5_1_7:2583168-2583660:-|nuORF', 'nc|ENSG00000106009|Q6PJG6-2|BRAT1', 'ENST00000469750.5_1_7:2583168-2595320:-|nuORF'] 35407 7981 GTDESKFNAV True PC9_epitope_Rep5 1066.49310345458 1066.49200993586 35.638 2 -0.012575034990593077 0.011816744305312193 0.9438714419765777 ['nc|ENSG00000122359|P50995-2|ANXA11', 'ENSG00000122359|ENST00000422982|ANXA11'] 5735 6332 APDEKYVAA True PC9_epitope_Rep1 962.4709114580199 962.46980993586 29.167 2 -0.012578280410419043 0.011816744305312193 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 87953 4532 QVQRPFMNK True NCI_RA007_Epitope_Rep4 1146.59679776082 1146.59515490379 23.828 3 -0.012583242195813818 0.011816744305312193 0.9438714419765777 ['ENST00000281172.9_1_12:15822752-15835827:-|nuORF'] 88136 20752 QWPPDPPLHF True PC9_epitope_Rep2 1232.59784330664 1232.59674993586 85.263 2 -0.012653565994757662 0.011837859783328703 0.9438714419765777 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000466465.5_1_2:46607308-46611796:+|nuORF'] 42085 6123 IEEIHSVSA True H1975_Epitope_Rep3 983.49237517859 983.49126993586 28.564 2 -0.012671171730079258 0.01185821421703737 0.9438714419765777 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 86375 11715 QQLGTAVEL True NCI_RA007_Epitope_Rep5 957.5131106231698 957.51200993586 51.716 2 -0.01271726703959053 0.01185821421703737 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 86230 15604 QPYMPTVSA True PC9_epitope_Rep2 992.4637179025999 992.46262993586 65.3 2 -0.012720665073794143 0.01185821421703737 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 4020 3887 AHISGATSV True PC9_epitope_Rep4 841.4293809992101 841.42828993586 21.133 2 -0.012723277479331602 0.01185821421703737 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 100139 19013 SLLDKIIGA True PC9_epitope_Rep6 928.5593325396 928.55822993586 85.777 2 -0.01273216773774838 0.011879072748637967 0.9438714419765777 ['ENSG00000177469|ENST00000357037|CAVIN1', 'nc|ENSG00000177469|Q6NZI2-2|CAVIN1'] 70857 5127 MEGKVPVAA True H1975_Epitope_Rep2 900.4738886634798 900.47278993586 24.796 2 -0.012748516583818603 0.011879072748637967 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 74754 15256 NLLQQYKTL True PC9_epitope_Rep2 1119.62880908175 1119.6277099358601 63.956 2 -0.012775957001777163 0.0118999294977247 0.9438714419765777 ['nc|ENSG00000155755|Q96Q45-4|TMEM237', 'nc|ENSG00000155755|Q96Q45-2|TMEM237', 'ENSG00000155755|ENST00000409883|TMEM237', 'nc|ENSG00000155755|Q96Q45-5|TMEM237', 'nc|ENSG00000155755|Q96Q45-3|TMEM237'] 24421 4291 FAGDDAPR True NCI_RA007_Epitope_Rep1 847.38243080679 847.38132993586 20.801 2 -0.012786666715555334 0.0118999294977247 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 119077 17291 VEHLTVPL True PC9_epitope_Rep5 906.5174677276199 906.51636993586 71.515 2 -0.012789029964073403 0.01191492996241886 0.9438714419765777 ['ENST00000503518.2_1_4:2967477-2967627:+|nuORF'] 48793 8022 KEQVPGFTP True H1975_Epitope_Rep3 1001.5181960036098 1001.51708993586 35.83 2 -0.012815358672792267 0.01191492996241886 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 125055 14254 VLPGHFNTF True PC9_epitope_Rep6 1030.5236157372199 1030.5225099358602 66.719 2 -0.012841577944094958 0.01191492996241886 0.9438714419765777 ['ENSG00000176055|ENST00000316610|MBLAC2'] 56190 12823 LDPCTQETL True PC9_epitope_Rep4 1018.4641118254199 1018.46300993586 57.187 2 -0.012868509456401677 0.01191492996241886 0.9438714419765777 ['POM121L12|p.R175Q|1|0.73|ENSG00000221900|chr7:53036195-53036195|G/A|missense_variant'] 62240 18846 LLQAQNLLT True PC9_epitope_Rep5 1012.59169529704 1012.59058993586 77.508 2 -0.012872804289760287 0.01191492996241886 0.9438714419765777 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1', 'ENST00000560232.6_1_1:167301714-167356435:+|nuORF'] 28683 14101 FSTALYGESDL True H1975_Epitope_Rep1 1201.55028397753 1201.54977496793 59.408 1 -0.012905329451870466 0.01191492996241886 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 112747 5737 TPKMPGQSV True PC9_epitope_Rep6 943.47970231991 943.47860993586 30.226 2 -0.012922204256596853 0.01191492996241886 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000420969.1_1_2:162357792-162360000:-|nuORF'] 25843 21205 FGFTLLEAL True NCI_RA007_Epitope_Rep4 1009.5484335027298 1009.54732993586 91.94 2 -0.012977049226518633 0.01191492996241886 0.9438714419765777 ['ENSG00000155957|ENST00000358230|TMBIM4', 'TMBIM4|p.Y174Ifs*4|1|0.42|ENSG00000155957|chr12:66138157-66138157|A/-|frameshift_variant'] 109838 18924 THLLGVAL True PC9_epitope_Rep3 822.49633836022 822.49524993586 78.012 2 -0.013004828241313384 0.01191492996241886 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000545732.1_1_12:6623431-6623638:+|nuORF'] 39610 9654 HPLLGVSA True PC9_epitope_Rep4 792.4493881678001 792.44828993586 44.759 2 -0.013007221496691819 0.01191492996241886 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 103568 13465 SRDEYYHLL True PC9_epitope_Rep2 1194.56693710118 1194.56530490379 57.072 3 -0.013046621175112646 0.01191492996241886 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 60570 18700 LIRGESLII True PC9_epitope_Rep2 1012.62808080576 1012.62698993586 77.301 2 -0.01305008779988508 0.01191492996241886 0.9438714419765777 ['ENSG00000162753|ENST00000367714|SLC9C2'] 24483 23478 FAIPGSIFL True PC9_epitope_Rep2 963.5429541994699 963.5424049679301 95.779 1 -0.013055873165736528 0.01191492996241886 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 117622 21639 VAIAGLMEV True PC9_epitope_Rep5 901.49428975489 901.49318993586 88.277 2 -0.01307935471688158 0.01191492996241886 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 95475 13766 SAMEVVPAL True NCI_RA007_Epitope_Rep3 915.4735543103099 915.47244993586 61.475 2 -0.013104405708326243 0.01191492996241886 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 96098 4749 SEDPKNNIP True H1975_Epitope_Rep3 1012.48253877088 1012.48144993586 23.393 2 -0.013106170891793275 0.01191492996241886 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1', 'nc|ENSG00000172534|P51610-3|HCFC1'] 48663 2610 KELEKTYSA True NCI_RA007_Epitope_Rep3 1067.54989005471 1067.5487899358602 14.735 2 -0.013115480693652435 0.01191492996241886 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 74895 9185 NLQYNISRNT True H1975_Epitope_Rep3 1221.61019889549 1221.60910993586 40.32 2 -0.013145506738093093 0.01191492996241886 0.9438714419765777 ['ENST00000298105.7_1_13:103543811-103548031:+|nuORF', 'nc|ENSG00000250878|A6NDL7|METTL21EP'] 95334 7658 SAGGFLGVK True NCI_RA007_Epitope_Rep3 834.4599528514999 834.45884993586 37.246 2 -0.013151876279808312 0.01191492996241886 0.9438714419765777 ['ENST00000426740.6_3_1:161514508-161514637:-|nuORF'] 127596 11822 VQYNEPLKV True PC9_epitope_Rep4 1088.5866099165999 1088.58550993586 53.24 2 -0.013157873040253081 0.01191492996241886 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 114789 11892 TTATEALWHY True H1975_Epitope_Rep2 1191.5560380643099 1191.5549499358601 50.823 2 -0.013207589436511548 0.01191492996241886 0.9438714419765777 ['ENST00000216277.12_1_14:96968904-96986484:+|nuORF'] 3468 12328 [Acetylation]-AGLNSLEAVK True H1975_Epitope_Rep1 1042.5658747883201 1042.56537496793 52.448 1 -0.013219313588449282 0.01191492996241886 0.9438714419765777 ['ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF'] 98436 20739 SIITKDLFQV True PC9_epitope_Rep1 1162.65977485686 1162.6586699358602 84.599 2 -0.013224389483754387 0.01191492996241886 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000556139.1_1_14:102505853-102505889:+|nuORF'] 38851 13165 HIGDAVVI True PC9_epitope_Rep5 822.4599528515 822.45884993586 55.644 2 -0.01322750826845041 0.01191492996241886 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 51981 12711 KLAPPLVTL True NCI_RA007_Epitope_Rep4 950.6164534929001 950.61534993586 55.947 2 -0.013292341822600261 0.01191492996241886 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 86145 7425 QPRYPVNSV True PC9_epitope_Rep4 1058.55089311422 1058.5497899358602 35.91 2 -0.013338535690836248 0.011953807074092257 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 39614 9143 HPLLGVSA True PC9_epitope_Rep6 792.4493881678001 792.4488349679301 45.277 1 -0.013338993045926013 0.011953807074092257 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 79679 14196 PHLENVVL True PC9_epitope_Rep2 919.51271670035 919.51160993586 59.873 2 -0.013352787798715406 0.011953807074092257 0.9438714419765777 ['ENST00000485726.1_1_7:103828364-103848439:-|nuORF', 'nc|ENSG00000164815|O43913-2|ORC5', 'ENSG00000164815|ENST00000297431|ORC5'] 64092 10433 LQEDPPAGV True PC9_epitope_Rep4 924.4552613938798 924.45416993586 47.841 2 -0.013374301876387206 0.011953807074092257 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 120183 14378 VFLKAGASF True PC9_epitope_Rep4 938.5225531080598 938.52144993586 63.214 2 -0.01338765892243796 0.011953807074092257 0.9438714419765777 ['ENST00000368875.6_2_1:151298654-151299818:-|nuORF'] 69269 19639 LVPDVVNEV True PC9_epitope_Rep5 982.53351171458 982.53240993586 80.596 2 -0.01339705178412609 0.011953807074092257 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 137849 7721 YPIEHGIITN True NCI_RA007_Epitope_Rep3 1155.5924235730297 1155.5913299358601 37.493 2 -0.0134064541824415 0.011953807074092257 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 11983 9846 DHVQTVSL True PC9_epitope_Rep2 897.45559574705 897.45448993586 43.207 2 -0.013415019209066332 0.011953807074092257 0.9438714419765777 ['nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-4|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1', 'ENSG00000101391|ENST00000346416|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6|CDK5RAP1', 'ENST00000482967.5_1_20:31946851-31989286:-|nuORF', 'ENST00000461710.5_1_20:31948117-31960625:-|nuORF'] 132522 23376 VYPFPTFQPAF True PC9_epitope_Rep1 1312.6492101731599 1312.64810993586 94.695 2 -0.013417152951253387 0.011953807074092257 0.9438714419765777 ['ENSG00000132017|ENST00000254337|DCAF15'] 115573 8418 TVIAKVNNV True PC9_epitope_Rep5 956.5654805492 956.56438993586 37.321 2 -0.013430670138644935 0.011953807074092257 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 48767 7899 KEQLPPLAA True H1975_Epitope_Rep1 965.5545815123298 965.55348993586 35.336 2 -0.013442069154709394 0.011953807074092257 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 55360 19533 LASLLLQI True PC9_epitope_Rep6 869.55860426361 869.55805496793 87.798 1 -0.01344503996059551 0.011953807074092257 0.9438714419765777 ['ENSG00000001631|ENST00000394505|KRIT1', 'nc|ENSG00000001631|O00522-2|KRIT1', 'ENST00000486261.5_1_7:91830052-91864980:-|nuORF', 'ENST00000475770.5_1_7:91830052-91864980:-|nuORF', 'nc|ENSG00000001631|O00522-3|KRIT1'] 36462 23102 GVISGLFEL True PC9_epitope_Rep2 933.5171333744499 933.51602993586 94.352 2 -0.013461217767739902 0.011953807074092257 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 8373 6521 ATNGPPVLVK True NCI_RA007_Epitope_Rep4 994.58113061334 994.58002993586 31.688 2 -0.013484295786985926 0.011953807074092257 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 40658 12992 HTILIVEKV True PC9_epitope_Rep5 1050.6437308699 1050.6426299358602 54.983 2 -0.013494258517910791 0.011953807074092257 0.9438714419765777 ['ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF'] 81428 6987 PQEEAPEV True H1975_Epitope_Rep3 897.4079768482899 897.40686993586 31.837 2 -0.013529950437913229 0.011972852996414547 0.9438714419765777 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 8365 19333 ATMPVVPSV True PC9_epitope_Rep1 899.4786396907499 899.47754993586 79.17 2 -0.013530313494737352 0.011972852996414547 0.9438714419765777 ['ENSG00000148341|ENST00000372564|SH3GLB2', 'nc|ENSG00000148341|Q9NR46-2|SH3GLB2', 'ENST00000479237.5_1_9:131770965-131773053:-|nuORF', 'ENST00000461811.5_1_9:131770965-131772716:-|nuORF'] 76254 16950 NSDLNNLLF True H1975_Epitope_Rep3 1048.5189242796 1048.5178299358602 70.78 2 -0.013558905396724743 0.011972852996414547 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 107414 18764 SYTSGLETL True PC9_epitope_Rep3 969.4654917244101 969.46494496793 77.397 1 -0.013582543621515923 0.011972852996414547 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 80654 18544 PLPPPLPPP True PC9_epitope_Rep3 923.54803957991 923.54694993586 76.549 2 -0.013599672819907932 0.011972852996414547 0.9438714419765777 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 90744 9195 RKQMVIDVL True NCI_RA007_Epitope_Rep5 1100.6375999436398 1100.6365099358602 42.019 2 -0.013611581260407596 0.011972852996414547 0.9438714419765777 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 28558 15232 FSLPHVGYL True H1975_Epitope_Rep2 1031.54401682863 1031.54290993586 63.747 2 -0.013618822101856404 0.011972852996414547 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF'] 64095 11475 LQEDPPAGV True PC9_epitope_Rep5 924.4552613938798 924.45416993586 49.135 2 -0.013636551921500968 0.011972852996414547 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 47566 21900 IYM[Oxidation]DTLNIF True PC9_epitope_Rep2 1144.547447907 1144.54634993586 89.714 2 -0.013647476406360963 0.011972852996414547 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 74063 12042 NHTALTVVM True PC9_epitope_Rep4 984.5062514209201 984.50514993586 54.126 2 -0.013658227229381292 0.011991891603542089 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 60628 24831 LITDFFWGI True PC9_epitope_Rep5 1110.57498260374 1110.57388993586 100.67 2 -0.013675004802197577 0.011991891603542089 0.9438714419765777 ['ENST00000487571.1_1_3:53922418-53925815:-|nuORF', 'ENSG00000113811|ENST00000495461|SELENOK'] 69192 18303 LVMGDIPAA True PC9_epitope_Rep4 885.4629896266099 885.46188993586 78.471 2 -0.013686076491199189 0.011991891603542089 0.9438714419765777 ['nc|ENSG00000132780|P49321-2|NASP', 'ENSG00000132780|ENST00000350030|NASP', 'nc|ENSG00000132780|P49321-3|NASP', 'ENST00000534101.1_1_1:46049764-46072228:+|nuORF', 'ENST00000464190.6_1_1:46049764-46072280:+|nuORF', 'NASP|p.T209Dfs*3|1|0.09|ENSG00000132780|chr1:45607535-45607536|-/G|frameshift_variant', 'ENST00000529333.5_1_1:46049729-46070604:+|nuORF'] 139755 12013 YVADLVHSA True PC9_epitope_Rep1 973.4868958753299 973.48578993586 51.069 2 -0.013715892172495693 0.011991891603542089 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 39520 7403 HPESQLASL True PC9_epitope_Rep5 980.4927095317599 980.49160993586 33.432 2 -0.013718944155507787 0.011991891603542089 0.9438714419765777 ['ENST00000567015.5_1_16:69171761-69173794:+|nuORF'] 26105 22137 FHFIIPAL True PC9_epitope_Rep5 956.5483739330798 956.54726993586 90.186 2 -0.013747335400071514 0.011991891603542089 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'nc|ENSG00000009335|Q15386-2|UBE3C', 'nc|ENSG00000009335|Q15386-3|UBE3C'] 132744 16959 VYSKDNPNLLF True PC9_epitope_Rep4 1308.67140216972 1308.6703099358601 73.225 2 -0.013781052236923467 0.011991891603542089 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 57 12707 AAAGSPVFL True H1975_Epitope_Rep1 831.44905381463 831.44794993586 53.934 2 -0.013835581063477854 0.011991891603542089 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 33474 16166 GLGPVAEV True PC9_epitope_Rep5 740.4068546494799 740.40630496793 67.172 1 -0.013839589877362377 0.011991891603542089 0.9438714419765777 ['nc|ENSG00000128283|Q00587-2|CDC42EP1', 'ENSG00000128283|ENST00000249014|CDC42EP1'] 63288 6202 LPASNLAGKEA True PC9_epitope_Rep6 1069.57677350889 1069.57566993586 32.314 2 -0.013846804830496365 0.012007336631974065 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 47189 14755 IYAGQWNDF True NCI_RA007_Epitope_Rep4 1112.49270953176 1112.4916099358602 64.21 2 -0.0138476425687334 0.012007336631974065 0.9438714419765777 ['ENSG00000158270|ENST00000400256|COLEC12', 'ENST00000582147.1_1_18:320047-333168:-|nuORF', 'COLEC12|p.G710V|1|0.26|ENSG00000158270|chr18:321742-321742|C/A|missense_variant'] 97578 10193 SGYLLPDTK True PC9_epitope_Rep6 992.51786165044 992.51676993586 49.849 2 -0.013857243375381747 0.012007336631974065 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1'] 81252 11794 PPPLPPPPP True PC9_epitope_Rep2 907.51673945163 907.51564993586 50.697 2 -0.0138586616430358 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000135723|ENST00000258201|FHOD1', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000122574|ENST00000242140|WIPF3', 'ENSG00000090470|ENST00000204549|PDCD7'] 8344 6990 ATLSICSPK True NCI_RA007_Epitope_Rep3 918.4844533471801 918.48334993586 34.604 2 -0.013884118545755192 0.012007336631974065 0.9438714419765777 ['ENSG00000121060|ENST00000316881|TRIM25', 'ENST00000572021.5_1_17:54969063-54989474:-|nuORF'] 27195 17312 FLSQPILL True H1975_Epitope_Rep3 929.5586042636099 929.55750993586 72.243 2 -0.01388984470369114 0.012007336631974065 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 70873 5841 M[Oxidation]EGPTPVSA True H1975_Epitope_Rep3 903.4007836733099 903.40023496793 27.482 1 -0.013904935053761874 0.012007336631974065 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 17009 13960 EGLEELLSA True NCI_RA007_Epitope_Rep1 959.48114178855 959.48004993586 58.324 2 -0.013910745622766195 0.012007336631974065 0.9438714419765777 ['ENSG00000111671|ENST00000524270|SPSB2', 'nc|ENSG00000111671|Q99619-2|SPSB2'] 17193 14555 EHAGVISVL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 61.257 2 -0.013916934898516527 0.012007336631974065 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 74020 8607 NHSADFETV True PC9_epitope_Rep5 1018.43558857846 1018.43448993586 38.051 2 -0.013925245991270256 0.012007336631974065 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 8470 8037 ATTDELKTV True PC9_epitope_Rep1 976.50769088956 976.50658993586 35.736 2 -0.013928164036015633 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 12256 18526 DIRNYFQV True PC9_epitope_Rep4 1053.5243440132099 1053.5232499358601 79.334 2 -0.013964150918061913 0.012007336631974065 0.9438714419765777 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 58347 7087 LEVAKSLSA True H1975_Epitope_Rep3 916.5229470308799 916.52184993586 32.228 2 -0.01396454527268587 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 121069 13320 VGFTNSYFGN True NCI_RA007_Epitope_Rep4 1104.48762415132 1104.48652993586 58.384 2 -0.013970400247022067 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1'] 25924 12114 FGPALSVK True PC9_epitope_Rep3 817.46978925921 817.46868993586 51.64 2 -0.01399637698662259 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 57425 7367 LEIKPPPSA True H1975_Epitope_Rep1 950.54368247546 950.54258993586 33.345 2 -0.014054078591115054 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant', 'SRCAP|p.N716Ifs*24|1|0.21|ENSG00000080603|chr16:30713222-30713244|CAATGCCTTTCATGTGTGTATCA/-|frameshift_variant'] 39733 10784 HPWETVTTAA True PC9_epitope_Rep4 1111.52982331647 1111.5287299358602 49.239 2 -0.014069345829535703 0.012007336631974065 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 48352 4541 KEADYVAQA True NCI_RA007_Epitope_Rep4 993.4767251144498 993.47562993586 23.869 2 -0.014089161120794894 0.012007336631974065 0.9438714419765777 ['ENSG00000013583|ENST00000014930|HEBP1'] 53881 15676 KYIDQKFVL True PC9_epitope_Rep3 1152.6542955536 1152.6531899358602 65.44 2 -0.01411253501914914 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000467447.1_1_6:42974755-42975804:+|nuORF', 'nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 88038 13505 QVTNEFQTV True PC9_epitope_Rep4 1064.51383889916 1064.51274993586 59.843 2 -0.014118843520703694 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 12039 13093 DIDLDALAA True H1975_Epitope_Rep2 915.4549270407099 915.4543749679301 55.487 1 -0.014146786967550139 0.012007336631974065 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 41282 19745 IAGPGFINV True PC9_epitope_Rep4 886.49125297978 886.49070496793 84.073 1 -0.014153317261089812 0.012007336631974065 0.9438714419765777 ['nc|ENSG00000113643|P54136-2|RARS1', 'ENSG00000113643|ENST00000231572|RARS1', 'ENST00000521939.5_1_5:167913503-167921691:+|nuORF'] 97640 6714 SHAQTVVL True PC9_epitope_Rep2 853.46576650793 853.46466993586 31.237 2 -0.014158321820561499 0.012007336631974065 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 89672 4049 REVGSLGTSA True NCI_RA007_Epitope_Rep3 975.4985231881899 975.4974299358599 22.395 2 -0.014206547482513118 0.012027637976627143 0.9438714419765777 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.R1708Afs*23|1|0.17|ENSG00000185010|chrX:154928668-154928668|G/-|frameshift_variant', 'F8|p.E1756Nfs*16|1|0.1|ENSG00000185010|chrX:154906527-154906527|C/-|frameshift_variant'] 140591 17572 YYLTPDGQRF True PC9_epitope_Rep1 1258.59823722946 1258.5971499358602 72.383 2 -0.014218276796946443 0.012027637976627143 0.9438714419765777 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11', 'chr19:15650290-15652569|237|10.08|0.53|4.24|+|ENST00000592424|CYP4F3,CYP4F3', 'nc|ENSG00000186115|P78329-2|CYP4F2', 'ENST00000587671.2_1_19:15996764-16008275:-|nuORF', 'CYP4F2|p.E352Gfs*15|1|0.14|ENSG00000186115|chr19:15885986-15885987|-/T|frameshift_variant', 'ENST00000392846.7_1_19:15989583-16003262:-|nuORF', 'ENST00000592279.6_1_19:15757939-15770192:+|nuORF', 'nc|ENSG00000186529|Q08477-2|CYP4F3', 'ENSG00000186529|ENST00000221307|CYP4F3', 'ENSG00000186115|ENST00000221700|CYP4F2', 'chr19:15640929-15641415|292|28.94|0.65|5.49|+|ENST00000586182|CYP4F3,CYP4F3'] 6372 6515 APRQPGLMA True PC9_epitope_Rep4 939.4960210903898 939.49492993586 32.183 2 -0.014273495832429418 0.012027637976627143 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 98634 19190 SIPEGALVAV True PC9_epitope_Rep4 954.5385970950199 954.53750993586 81.914 2 -0.014276241361973467 0.012027637976627143 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant'] 131053 22852 VVLPIVITL True PC9_epitope_Rep4 965.65250464845 965.65140993586 96.122 2 -0.014289197115231373 0.012047935858068919 0.9438714419765777 ['ENST00000432401.5_1_3:10067730-10067880:-|nuORF'] 23658 20857 EYGNIIVTL True PC9_epitope_Rep4 1020.54916177872 1020.5485749679301 88.38 1 -0.014307712993067299 0.012047935858068919 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 48784 8489 KEQLPPLAAA True H1975_Epitope_Rep3 1036.5916952970397 1036.5905899358602 37.638 2 -0.01433349950459334 0.012047935858068919 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 116861 18915 TYNMVLNLL True NCI_RA007_Epitope_Rep3 1079.56851732431 1079.56740993586 82.69 2 -0.014347435720519913 0.012047935858068919 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 88202 21231 QYAPLLAVF True PC9_epitope_Rep6 1020.5644179200399 1020.56332993586 94.514 2 -0.014400240736759055 0.012068744935818158 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 113720 9506 TRDETNYGIP True PC9_epitope_Rep6 1164.5411162761598 1164.54000993586 46.824 2 -0.014410689228575505 0.012068744935818158 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 54317 21910 KYPSPFFVF True PC9_epitope_Rep5 1130.5800679841798 1130.5794749679299 89.316 1 -0.014450135961343862 0.012089294471333233 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 83040 16072 PYLDSFYEY True NCI_RA007_Epitope_Rep3 1195.5073565363898 1195.50624993586 70.907 2 -0.014455090725119663 0.012089294471333233 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 77804 19508 PAEPAFLA True PC9_epitope_Rep3 814.4225047136199 814.4219549679301 80.269 1 -0.01445838626889473 0.012089294471333233 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 69369 21256 LVQDLLTQV True PC9_epitope_Rep5 1027.5913609438699 1027.59026993586 86.813 2 -0.014481807255193838 0.012110357767259392 0.9438714419765777 ['nc|ENSG00000174791|Q13671-2|RIN1', 'ENSG00000174791|ENST00000311320|RIN1', 'ENST00000526246.5_1_11:66099749-66102792:-|nuORF'] 108945 5451 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.4390649679301 25.994 1 -0.014562183976386733 0.012128575691691179 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 61411 15514 LLEPVLLLGK True NCI_RA007_Epitope_Rep5 1093.7110821537299 1093.7099899358602 66.373 2 -0.01457448170732315 0.012128575691691179 0.9438714419765777 ['ENSG00000105193|ENST00000251453|RPS16', 'ENST00000469078.5_1_19:20235852-20236290:+|nuORF'] 124777 20279 VLKVFLENV True PC9_epitope_Rep1 1059.63283183303 1059.6317299358602 82.831 2 -0.014646332037016551 0.012128575691691179 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 46646 16498 ITVEKIIKI True PC9_epitope_Rep3 1055.69543208959 1055.6943299358602 68.596 2 -0.014686698464767596 0.012128575691691179 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 40222 8910 HRGTGLVL True PC9_epitope_Rep5 851.49773534255 851.49662993586 39.217 2 -0.014692825074597626 0.012128575691691179 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 101208 11386 SLVYNLTK True PC9_epitope_Rep1 936.5280324113199 936.52692993586 48.677 2 -0.014696190859421922 0.012128575691691179 0.9438714419765777 ['nc|ENSG00000290503|Q9HBA9|FOLH1B', 'ENST00000529567.5_1_11:89372457-89431764:+|nuORF'] 134033 18461 WQDYIYKEV True PC9_epitope_Rep5 1242.5920892198599 1242.59098993586 76.031 2 -0.014701386107457592 0.012128575691691179 0.9438714419765777 ['ENSG00000152147|ENST00000281950|GEMIN6'] 36770 9495 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 41.491 2 -0.014728732899451012 0.012128575691691179 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 87543 14364 QTISALIKA True PC9_epitope_Rep1 943.57023157647 943.56912993586 60.075 2 -0.014741389526704727 0.012128575691691179 0.9438714419765777 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF', 'VPS35|p.H565R|1|0.3|ENSG00000069329|chr16:46663116-46663116|T/C|missense_variant'] 1837 12041 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.48512993586 51.477 2 -0.014747705839076595 0.012128575691691179 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 8256 17920 ATINEVVQV True PC9_epitope_Rep5 971.52876068731 971.52821496793 73.947 1 -0.014761814758160543 0.012128575691691179 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217', 'ZNF217|p.S275Ifs*4|1|0.32|ENSG00000171940|chr20:53582004-53582005|-/T|frameshift_variant'] 120529 14882 VGAAALFL True H1975_Epitope_Rep1 760.44832553864 760.4477749679301 62.478 1 -0.01477617077298649 0.012128575691691179 0.9438714419765777 ['ENST00000257700.6_1_7:105205780-105205849:+|nuORF'] 17490 8082 EHGPNPIL True PC9_epitope_Rep6 875.45011644379 875.44900993586 40.59 2 -0.014799051481384476 0.01214652545442922 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 8706 12990 AVDGNTVEL True PC9_epitope_Rep4 916.45017601344 916.44906993586 57.859 2 -0.014819216966853494 0.01214652545442922 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 75865 13880 NRDNVGLVL True PC9_epitope_Rep2 998.5508931142199 998.5503449679301 58.67 1 -0.01488955222459472 0.01214652545442922 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 124626 5694 VLIAAHGNSLR True PC9_epitope_Rep6 1149.66184054553 1149.66019490379 30.03 3 -0.014893178572896038 0.01214652545442922 0.9438714419765777 ['ENST00000548270.1_1_12:94034600-94035134:-|nuORF', 'ENST00000467867.1_1_10:99187588-99192278:+|nuORF', 'nc|ENSG00000164708|P15259|PGAM2', 'ENSG00000171314|ENST00000334828|PGAM1', 'ENST00000552554.1_1_12:96066451-96066841:+|nuORF'] 126003 8753 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.49088993586 43.559 2 -0.014896583395874338 0.01214652545442922 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 29873 12026 FVYDEPGHAV True PC9_epitope_Rep2 1132.5189242795998 1132.5178299358602 51.576 2 -0.014896673308951777 0.01214652545442922 0.9438714419765777 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant', 'nc|ENSG00000138119|Q9NZM1-8|MYOF', 'nc|ENSG00000138119|Q9NZM1-7|MYOF'] 71084 6627 METAAAVAA True H1975_Epitope_Rep2 833.3953039896098 833.39420993586 30.399 2 -0.014899733241574148 0.01214652545442922 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 1211 6743 AEDEPPAPP True H1975_Epitope_Rep2 921.4079768482899 921.4074249679301 30.851 1 -0.014901236877250423 0.01214652545442922 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 125732 19923 VNEVAILSL True PC9_epitope_Rep4 956.5542471591599 956.55369496793 84.768 1 -0.014934700767772107 0.01214652545442922 0.9438714419765777 ['ENST00000455385.6_1_7:105731299-105731344:-|nuORF'] 46226 13894 ITDQGIEFY True H1975_Epitope_Rep3 1084.5076908895599 1084.50717496793 58.754 1 -0.01494772684732506 0.01214652545442922 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF'] 109529 20160 THALEWPSL True PC9_epitope_Rep3 1052.52909504048 1052.5279899358602 82.799 2 -0.014976281263697168 0.01214652545442922 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 102237 5433 SPSTVIHGA True PC9_epitope_Rep5 867.4450310633498 867.44392993586 25.908 2 -0.014986606452980826 0.01214652545442922 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 113356 5926 TQKSLSLSPG True NCI_RA007_Epitope_Rep4 1016.5502244078799 1016.5496749679301 29.415 1 -0.014988545161265118 0.01214652545442922 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 126679 5623 VPRPASVSA True PC9_epitope_Rep5 882.49231560894 882.49120993586 26.63 2 -0.015041314861698863 0.012166020369028849 0.9438714419765777 ['ENSG00000108773|ENST00000225916|KAT2A'] 38798 7034 HHYSGNNIEL True PC9_epitope_Rep4 1182.5417849825 1182.54013490379 34.306 3 -0.015073513434630188 0.012166020369028849 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 39095 6589 HLARLGAL True PC9_epitope_Rep6 849.5184707871299 849.51736993586 34.049 2 -0.015096826492994805 0.012166020369028849 0.9438714419765777 ['ENSG00000170128|ENST00000304244|GPR25'] 127541 14062 VQVPHHLLSSV True PC9_epitope_Rep5 1214.6771562565002 1214.67550490379 59.103 3 -0.015099166162947117 0.012166020369028849 0.9438714419765777 ['ENST00000441339.2_11:69061685-69061946:+|nuORF'] 6366 7725 APRQPGLMA True PC9_epitope_Rep3 939.4960210903898 939.49492993586 34.709 2 -0.01511050064273873 0.012166020369028849 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 52509 8887 KPNSVVISC True PC9_epitope_Rep5 945.49535238405 945.49424993586 39.127 2 -0.015136938690937641 0.012166020369028849 0.9438714419765777 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF'] 126871 15008 VPTNIIAA True PC9_epitope_Rep3 797.4647038787699 797.4641549679301 62.854 1 -0.015164862339196606 0.012166020369028849 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 75230 4896 NPKDNNQFASA True PC9_epitope_Rep5 1204.54726428576 1204.54616993586 23.872 2 -0.015188818639062672 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 72485 12381 M[Oxidation]VAPAVASV True PC9_epitope_Rep3 859.4473399429099 859.44624993586 52.652 2 -0.015204714665964906 0.012181616832779624 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 86654 13928 QRGPPIIL True PC9_epitope_Rep2 892.5494365622399 892.54832993586 58.853 2 -0.015231538449806467 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 34624 18433 GQIEVVPEV True PC9_epitope_Rep4 968.5178616504398 968.51731496793 78.971 1 -0.01526688929359825 0.012181616832779624 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 17087 9219 EGRDTHYLI True PC9_epitope_Rep4 1102.54072235334 1102.5396299358601 43.058 2 -0.01526905490502501 0.012181616832779624 0.9438714419765777 ['TENM1|p.F2575L|1|0.89|ENSG00000009694|chrX:124380991-124380991|A/G|missense_variant'] 13729 13879 DQIYDIFQK True NCI_RA007_Epitope_Rep2 1168.5764391557198 1168.57534993586 58.638 2 -0.015275336259923104 0.012181616832779624 0.9438714419765777 ['ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 62540 20499 LLTEQINLYL True H1975_Epitope_Rep1 1218.6859896047 1218.6848899358602 85.256 2 -0.015275708888091651 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000006576|Q8N3S3-3|PHTF2', 'nc|ENSG00000006576|Q8N3S3-2|PHTF2', 'ENSG00000006576|ENST00000416283|PHTF2', 'ENSG00000116793|ENST00000369604|PHTF1'] 126391 15996 VPLGPGQISA True PC9_epitope_Rep3 937.5232813840499 937.52218993586 66.672 2 -0.015304769010396825 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 93868 7938 RVFVVGVGMTK True NCI_RA007_Epitope_Rep3 1191.67979910879 1191.67870993586 38.333 2 -0.015308955358337716 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 81273 5868 PPPQPPPPP True NCI_RA007_Epitope_Rep3 922.4912529797798 922.49014993586 30.06 2 -0.0153135219261882 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000168066|Q15637-5|SF1', 'MARCHF11|p.R187Dfs*15|1|0.2|ENSG00000183654|chr5:16177860-16177860|G/-|frameshift_variant', 'ENSG00000183654|ENST00000332432|MARCHF11', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ENSG00000203867|ENST00000369519|RBM20', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 95382 10169 SAIGLADPP True H1975_Epitope_Rep3 839.4388830537499 839.43778993586 44.16 2 -0.015328290685665411 0.012181616832779624 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 92388 5459 RQREQEIAL True NCI_RA007_Epitope_Rep4 1141.6203696563698 1141.61872490379 27.581 3 -0.015329151694651703 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 74972 21610 NLVPMIIHL True PC9_epitope_Rep5 1048.61032256664 1048.6092299358602 88.164 2 -0.01533398126758382 0.012181616832779624 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4'] 72335 13036 MTDGGLGLY True H1975_Epitope_Rep3 925.42151873745 925.4209649679301 55.382 1 -0.015344530295017127 0.012181616832779624 0.9438714419765777 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 96809 13919 SESDYIVMP True H1975_Epitope_Rep2 1039.4532127885498 1039.45210993586 58.687 2 -0.015362067457167908 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'SCARB1|p.G128S|1|0.24|ENSG00000073060|chr12:124815017-124815017|C/T|missense_variant', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1'] 18757 12129 ELDPNNAVYY True H1975_Epitope_Rep2 1196.53496826656 1196.53437496793 51.738 1 -0.015456597177390513 0.012181616832779624 0.9438714419765777 ['ENSG00000197860|ENST00000381007|SGTB'] 9866 14423 AYMPHTFFI True NCI_RA007_Epitope_Rep3 1125.53173789277 1125.53064993586 64.045 2 -0.015486118134505648 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 48541 6512 KEFTEAVEA True NCI_RA007_Epitope_Rep4 1022.4920408254197 1022.4909499358599 31.654 2 -0.01548616159315327 0.012181616832779624 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1'] 35228 9382 GSHSMRYFFT True H1975_Epitope_Rep3 1231.5444278347898 1231.54279490379 41.089 3 -0.015486589771124118 0.012181616832779624 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 116761 17573 TYLEKFQNL True PC9_epitope_Rep2 1154.5971746002997 1154.5960699358602 72.87 2 -0.01548835415186493 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 63262 16076 LPALAGVSA True PC9_epitope_Rep6 797.46470387877 797.4641549679301 74.164 1 -0.015493153658288562 0.012181616832779624 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 7657 4268 ASMPHPLRSR True NCI_RA007_Epitope_Rep4 1150.60294577042 1150.60129490379 22.749 3 -0.015501161458418438 0.012181616832779624 0.9438714419765777 ['nc|ENSG00000158352|Q9ULL8-2|SHROOM4', 'ENSG00000158352|ENST00000376020|SHROOM4'] 102721 16881 SQDTSFTTL True PC9_epitope_Rep1 998.4556553167 998.4551049679301 69.756 1 -0.015534532340665104 0.012202393628348737 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 118820 5746 VEEGAPPPP True H1975_Epitope_Rep2 891.4337976733099 891.43324496793 27.099 1 -0.015535599662715952 0.012202393628348737 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 89308 8655 RELVKNWVP True H1975_Epitope_Rep1 1139.64512785223 1139.64349490379 38.22 3 -0.015545710487303242 0.012223168654173765 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 108939 5060 TETQEKNPLP True H1975_Epitope_Rep2 1155.5771674317098 1155.57606993586 24.545 2 -0.015551241640713864 0.012223168654173765 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000402089.4_1_4:91760056-91760137:-|nuORF'] 111466 6339 TLLESERERL True PC9_epitope_Rep2 1244.67246479888 1244.6708249037902 29.783 3 -0.015571798378324947 0.012242377789133027 0.9438714419765777 ['ENST00000590279.1_1_19:12917826-12918144:+|nuORF', 'ENST00000590121.1_1_19:12917502-12918326:+|nuORF', 'ENSG00000104889|ENST00000221486|RNASEH2A'] 70728 11357 MDYLVNNTP True NCI_RA007_Epitope_Rep4 1065.48009624273 1065.47898993586 50.596 2 -0.01557815934423495 0.012242377789133027 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 56902 9637 LEDPSQLPP True H1975_Epitope_Rep3 994.49712620586 994.49602993586 42.086 2 -0.015592167610422033 0.012242377789133027 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 45045 18032 IQNLVSASL True PC9_epitope_Rep5 943.53384606775 943.53274993586 74.375 2 -0.015592536296699546 0.012242377789133027 0.9438714419765777 ['nc|ENSG00000110330|Q13490-2|BIRC2', 'ENSG00000110330|ENST00000227758|BIRC2'] 123 19995 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.50506993586 82.888 2 -0.015600210672478852 0.012242377789133027 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 73264 10419 NEIEPNFSA True H1975_Epitope_Rep1 1019.45598966987 1019.45488993586 45.028 2 -0.015611242668974408 0.012242377789133027 0.9438714419765777 ['nc|ENSG00000242498|Q7Z6K5-2|ARPIN', 'ENSG00000242498|ENST00000357484|ARPIN'] 135064 23549 YALDLSTFL True PC9_epitope_Rep2 1041.53826274185 1041.53767496793 96.056 1 -0.015691096052422887 0.012242377789133027 0.9438714419765777 ['ENSG00000137331|ENST00000259874|IER3'] 56923 6623 LEDRPSNLP True H1975_Epitope_Rep2 1039.52982331647 1039.5287299358602 30.384 2 -0.015696213233157664 0.012242377789133027 0.9438714419765777 ['ENSG00000108239|ENST00000225235|TBC1D12'] 116440 21483 TWTEVSYTF True PC9_epitope_Rep5 1132.5076908895599 1132.5065899358601 87.668 2 -0.015698798459759383 0.012262102439647465 0.9438714419765777 ['ENSG00000116663|ENST00000376753|FBXO6'] 84913 12342 QHSVPLQL True PC9_epitope_Rep2 920.50796567308 920.50686993586 52.784 2 -0.015700199829387057 0.012262102439647465 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 113139 15198 TQAPPNVVL True PC9_epitope_Rep4 937.5232813840499 937.52218993586 66.382 2 -0.01573600253279164 0.012262102439647465 0.9438714419765777 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 4621 17178 ALAPGLPTA True PC9_epitope_Rep1 809.46470387877 809.46360993586 70.896 2 -0.015738772650284744 0.012262102439647465 0.9438714419765777 ['ENST00000472389.1_1_1:212606336-212608058:+|nuORF', 'ENST00000479589.5_1_1:212606267-212617713:+|nuORF', 'ENSG00000117691|ENST00000366988|NENF'] 132110 17979 VYINTAQEF True PC9_epitope_Rep2 1083.5236753068698 1083.52256993586 74.46 2 -0.015744115232667007 0.012262102439647465 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 2847 8021 AEVTSTLEA True H1975_Epitope_Rep2 919.44984166027 919.44874993586 35.8 2 -0.0157726299300687 0.012262102439647465 0.9438714419765777 ['ENSG00000119285|ENST00000366582|HEATR1'] 67031 20319 LTAPALALA True PC9_epitope_Rep5 839.5116540711899 839.51054993586 83.194 2 -0.015797783813506064 0.012283129324108568 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'APLP2|p.A46Cfs*4|1|0.32|ENSG00000084234|chr11:130109455-130109456|-/T|frameshift_variant', 'ENST00000533532.5_1_11:129939872-129979518:+|nuORF'] 130801 9023 VVESAYEVIK True NCI_RA007_Epitope_Rep2 1135.6124903112698 1135.6119749679299 39.698 1 -0.015829890540505112 0.012299965951651344 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000111716|ENST00000350669|LDHB'] 126040 13236 VPAPSPLSA True PC9_epitope_Rep3 837.45961849833 837.45852993586 55.946 2 -0.01586177295242984 0.012299965951651344 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 8500 14350 ATVLQAVSA True PC9_epitope_Rep4 858.4810822188999 858.47998993586 63.103 2 -0.01586813300529963 0.012299965951651344 0.9438714419765777 ['ENSG00000183291|ENST00000331835|SELENOF', 'ENST00000331835.9_2_1:87346375-87379803:-|nuORF', 'nc|ENSG00000183291|O60613-2|SELENOF'] 43438 6046 IHSQPQPAL True PC9_epitope_Rep4 989.5294293936498 989.52832993586 30.247 2 -0.015885676698668676 0.012299965951651344 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 53250 14711 KTFSEILNRV True PC9_epitope_Rep2 1205.67682190333 1205.67572993586 61.854 2 -0.015886453627543456 0.012299965951651344 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 106475 7473 SVVGPVKGV True PC9_epitope_Rep6 840.5069030439199 840.50580993586 37.989 2 -0.015896580122820234 0.012299965951651344 0.9438714419765777 ['nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 38293 15578 HFLDRHLVF True PC9_epitope_Rep4 1182.62981214126 1182.6281549037901 67.842 3 -0.015896991311130135 0.012299965951651344 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF', 'ENST00000519030.5_1_8:109252301-109260916:-|nuORF'] 116251 14857 TVVAQLKQL True PC9_epitope_Rep5 998.6124307416198 998.61132993586 62.148 2 -0.015897739506894062 0.012299965951651344 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 53201 11299 KTDDLTM[Oxidation]VLY True H1975_Epitope_Rep1 1213.59004099497 1213.58894993586 48.439 2 -0.015901546614109526 0.012299965951651344 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 72885 11934 NATTVVTTV True PC9_epitope_Rep1 904.48656152216 904.48546993586 50.77 2 -0.01591042068587112 0.012299965951651344 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 86143 8879 QPRYPVNSV True PC9_epitope_Rep3 1058.55089311422 1058.5497899358602 39.103 2 -0.01592267592660585 0.012299965951651344 0.9438714419765777 ['ENSG00000120438|ENST00000321394|TCP1', 'TCP1|p.N196Kfs*43|1|0.16|ENSG00000120438|chr6:159784748-159784749|-/T|frameshift_variant'] 10038 15986 AYVEDTVLF True NCI_RA007_Epitope_Rep4 1055.51752729727 1055.51642993586 69.363 2 -0.015922720650332994 0.012299965951651344 0.9438714419765777 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 40213 8978 HRGTGLVL True PC9_epitope_Rep1 851.49773534255 851.49662993586 39.379 2 -0.01594132552738973 0.012299965951651344 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 17226 13240 EHAGVISVL True PC9_epitope_Rep6 923.5076313199099 923.50652993586 62.577 2 -0.01594158244383004 0.012299965951651344 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 30762 15548 GAPEDVDILQ True PC9_epitope_Rep4 1055.51350454599 1055.5124099358602 67.728 2 -0.015942644530077522 0.012299965951651344 0.9438714419765777 ['ENSG00000196739|ENST00000356083|COL27A1', 'nc|ENSG00000196739|Q8IZC6-3|COL27A1'] 47316 20495 IYGGTYML True PC9_epitope_Rep1 916.4364405255999 916.43589496793 83.646 1 -0.01595318285732347 0.012299965951651344 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2', 'ENST00000471972.1_1_X:153668686-153669692:+|nuORF', 'ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153669338-153669692:+|nuORF', 'ENST00000476540.1_1_X:153669338-153670248:+|nuORF'] 126870 15001 VPTNIIAA True PC9_epitope_Rep3 797.4647038787699 797.46360993586 62.828 2 -0.01596233331125114 0.012299965951651344 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 16211 13635 EEFPSFGA True H1975_Epitope_Rep2 882.3759484440199 882.37484993586 57.585 2 -0.01596245556328829 0.012315742454214792 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 23615 22597 EYFESPFTI True PC9_epitope_Rep2 1131.5124419168299 1131.5113499358602 92.419 2 -0.015969964563157045 0.012315742454214792 0.9438714419765777 ['ENSG00000198938|ENST00000362079|MT-CO3'] 35553 14977 GTIGLIHAV True PC9_epitope_Rep2 879.51780208079 879.51670993586 62.865 2 -0.015979769130473172 0.012315742454214792 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 64217 11859 LQITTREDI True PC9_epitope_Rep2 1087.58733819259 1087.58624993586 50.942 2 -0.015987283320576574 0.012315742454214792 0.9438714419765777 ['ENSG00000164830|ENST00000517566|OXR1', 'nc|ENSG00000164830|Q8N573|OXR1', 'nc|ENSG00000164830|Q8N573-4|OXR1'] 74416 12447 NIVERLKEV True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 53.182 2 -0.01599094765921839 0.012315742454214792 0.9438714419765777 ['nc|ENSG00000258659|Q9BYJ4-2|TRIM34', 'ENST00000491385.1_1_11:5653561-5662456:+|nuORF', 'ENSG00000258659|ENST00000429814|TRIM34'] 125106 16998 VLPGVDALSNI True NCI_RA007_Epitope_Rep1 1096.61282466444 1096.61172993586 70.245 2 -0.0159918139095515 0.012315742454214792 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 118354 14453 VDGAVFAVV True H1975_Epitope_Rep2 875.4752685624699 875.47472496793 60.749 1 -0.015992962473339416 0.012315742454214792 0.9438714419765777 ['MED12|p.L1224V|1|0.36|ENSG00000184634|chrX:71129408-71129408|C/G|missense_variant'] 117621 21707 VAIAGLMEV True PC9_epitope_Rep1 901.49428975489 901.49318993586 88.328 2 -0.015998945820249594 0.012315742454214792 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 6742 15477 AQDPTAFSV True PC9_epitope_Rep4 934.4396113297399 934.43850993586 67.46 2 -0.01601534973633809 0.012315742454214792 0.9438714419765777 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 32575 9868 GHAEVTGTVL True PC9_epitope_Rep5 982.5083595959 982.50726993586 42.927 2 -0.01601716512743566 0.012315742454214792 0.9438714419765777 ['ENST00000495879.1_1_3:61547945-61734588:+|nuORF'] 24583 20456 FALSGPLFL True H1975_Epitope_Rep3 963.5429541994699 963.54184993586 85.518 2 -0.016024844791257577 0.012315742454214792 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 112825 10439 TPLYTDNTA True PC9_epitope_Rep5 994.46074069714 994.4596499358599 45.14 2 -0.016029043938687676 0.012315742454214792 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 44929 16463 IQEETVAEL True PC9_epitope_Rep1 1030.5182555732597 1030.51714993586 68.15 2 -0.01603273687478082 0.012315742454214792 0.9438714419765777 ['ENST00000593111.1_1_17:40986588-40991030:+|nuORF', 'ENSG00000131467|ENST00000590720|PSME3', 'nc|ENSG00000131467|P61289-3|PSME3', 'nc|ENSG00000131467|P61289-2|PSME3'] 96945 14834 SEVEIAWPA True H1975_Epitope_Rep3 1000.4865615221598 1000.48597496793 62.441 1 -0.016039256447521584 0.012315742454214792 0.9438714419765777 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 67935 9316 LTLGRWERAP True H1975_Epitope_Rep1 1197.66184054553 1197.6607499358602 40.74 2 -0.01603961064608468 0.012315742454214792 0.9438714419765777 ['ENSG00000182810|ENST00000332395|DDX28'] 135165 20646 YASDVQLIL True PC9_epitope_Rep4 1020.54916177872 1020.54806993586 87.571 2 -0.01606165582043079 0.012315742454214792 0.9438714419765777 ['nc|ENSG00000123094|Q8NHQ8-2|RASSF8', 'ENSG00000123094|ENST00000689635|RASSF8'] 40809 8347 HVIETLTKT True PC9_epitope_Rep5 1040.5866099165999 1040.58550993586 37.047 2 -0.016062729163603982 0.012315742454214792 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 5420 16751 ALVVQVAEA True PC9_epitope_Rep3 898.5123823471799 898.51128993586 69.574 2 -0.016081777783190303 0.012315742454214792 0.9438714419765777 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 12516 15341 DLAGSIIGK True PC9_epitope_Rep1 872.4967322830399 872.49562993586 63.828 2 -0.016083847256490705 0.012315742454214792 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 17326 7400 EHDPRVITV True PC9_epitope_Rep4 1064.56145779792 1064.56036993586 35.81 2 -0.016104915156116433 0.012315742454214792 0.9438714419765777 ['nc|ENSG00000102796|A0PJE2-2|DHRS12', 'ENSG00000102796|ENST00000444610|DHRS12', 'nc|ENSG00000102796|A0PJE2-3|DHRS12', 'nc|ENSG00000102796|A0PJE2|DHRS12'] 65403 9690 LSERYAELY True H1975_Epitope_Rep3 1142.5607890915799 1142.5596899358602 42.294 2 -0.01615279120693044 0.012315742454214792 0.9438714419765777 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 22373 13037 ETERFRELLLY True H1975_Epitope_Rep2 1467.7721788401498 1467.7710899358601 55.266 2 -0.016165112796331507 0.01233517652062952 0.9438714419765777 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 108463 10828 TEEPEIYEP True H1975_Epitope_Rep2 1105.48153571137 1105.48042993586 46.68 2 -0.0161746968256124 0.01233517652062952 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 103374 18868 SQVPHLPVL True PC9_epitope_Rep5 988.5705659296399 988.56946993586 77.594 2 -0.01620275755616201 0.01233517652062952 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 34897 14814 GQVPPLQSV True PC9_epitope_Rep5 923.50763131991 923.50652993586 61.982 2 -0.01621293196258658 0.01233517652062952 0.9438714419765777 ['ENSG00000106351|ENST00000300176|AGFG2'] 46552 9137 ITRARFEEL True PC9_epitope_Rep2 1133.61930702721 1133.61766490379 40.487 3 -0.01622234040667391 0.01233517652062952 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA2|p.T298A|1|0.1|ENSG00000126803|chr14:64541741-64541741|A/G|missense_variant', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 2954 17001 AFGYYGPLR True PC9_epitope_Rep3 1042.5236157372199 1042.5225099358602 70.553 2 -0.016232155233367806 0.01233517652062952 0.9438714419765777 ['nc|ENSG00000112081|P84103-2|SRSF3', 'ENSG00000112081|ENST00000373715|SRSF3'] 89282 4219 RELEVQHPAA True H1975_Epitope_Rep2 1148.59382055536 1148.59272993586 21.336 2 -0.016257844756242572 0.01233517652062952 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'ENST00000484403.5_1_21:30439206-30445917:-|nuORF'] 109624 13112 THDGSILIV True PC9_epitope_Rep6 953.51819600361 953.51708993586 62.054 2 -0.016263167795506402 0.012348827817806968 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 35591 13664 GTITQVIKV True PC9_epitope_Rep4 957.58588164061 957.58478993586 60.45 2 -0.01627235616805276 0.012348827817806968 0.9438714419765777 ['nc|ENSG00000166747|O43747-2|AP1G1', 'ENSG00000166747|ENST00000299980|AP1G1'] 87386 14093 QTDNIIYVY True H1975_Epitope_Rep2 1127.5498900547097 1127.5487899358602 59.363 2 -0.01627822518678727 0.012348827817806968 0.9438714419765777 ['ENSG00000138002|ENST00000260570|IFT172', 'ENST00000507184.5_1_2:27680991-27709067:-|nuORF', 'nc|ENSG00000138002|Q9UG01-2|IFT172', 'ENST00000475476.2_1_2:27707060-27712589:-|nuORF', 'ENST00000476264.6_1_2:27703990-27712589:-|nuORF', 'nc|ENSG00000138002|Q9UG01-3|IFT172', 'ENST00000511842.5_1_2:27693746-27712529:-|nuORF', 'IFT172|p.K94N|1|0.12|ENSG00000138002|chr2:27485032-27485032|C/G|missense_variant'] 1781 6299 AEHRIDFVA True NCI_RA007_Epitope_Rep3 1056.53524305008 1056.5341499358601 31.779 2 -0.016325261887713164 0.012348827817806968 0.9438714419765777 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000488235.1_1_3:195969427-195975126:-|nuORF'] 29679 18800 FVNDIFERI True PC9_epitope_Rep6 1151.59750895347 1151.59640993586 84.954 2 -0.016330443896544995 0.012348827817806968 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 20375 21764 EPIPYEFMA True PC9_epitope_Rep5 1095.49468367771 1095.4935899358602 88.744 2 -0.01633298914517817 0.012348827817806968 0.9438714419765777 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 60752 2696 LKEEEEDKKR True NCI_RA007_Epitope_Rep2 1302.6779441021397 1302.67630490379 14.713 3 -0.016369553019869892 0.012348827817806968 0.9438714419765777 ['ENSG00000179218|ENST00000316448|CALR'] 29481 15505 FVIETARQL True PC9_epitope_Rep2 1075.6025943339098 1075.6014899358602 64.914 2 -0.016388222109605652 0.012348827817806968 0.9438714419765777 ['ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2'] 28359 4372 FSDHHENKYL True H1975_Epitope_Rep3 1288.58364979448 1288.5820049037902 21.936 3 -0.0164035150311642 0.012348827817806968 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 75590 19566 NQQLPIESQMV True PC9_epitope_Rep2 1285.63363676201 1285.63252993586 80.642 2 -0.01640780326488317 0.012348827817806968 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 743 14614 AAVPRAAFL True PC9_epitope_Rep2 914.5337864980999 914.53268993586 61.482 2 -0.01641395510157699 0.012348827817806968 0.9438714419765777 ['nc|ENSG00000089248|P30040-2|ERP29', 'ENST00000553161.1_1_12:112451251-112452397:+|nuORF', 'ENSG00000089248|ENST00000261735|ERP29'] 109553 6014 THAPATLEA True PC9_epitope_Rep5 909.45559574705 909.45448993586 28.127 2 -0.0164165172471801 0.012348827817806968 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 25999 17655 FHDDSMKSFF True PC9_epitope_Rep5 1259.52810906431 1259.5264649037902 72.923 3 -0.016420197308909982 0.012348827817806968 0.9438714419765777 ['ENST00000481458.1_1_21:37771819-37785123:+|nuORF', 'ENSG00000159259|ENST00000314103|CHAF1B'] 5933 11143 APHPPLSVV True PC9_epitope_Rep6 915.51780208079 915.51670993586 53.813 2 -0.016428928533556972 0.012348827817806968 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 34952 17388 GQWSQGLISA True PC9_epitope_Rep6 1045.5192586327698 1045.5181699358602 79.497 2 -0.016448846086319704 0.012348827817806968 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 36813 21385 GVPQALFGV True PC9_epitope_Rep2 886.4912529797799 886.49070496793 87.729 1 -0.016454880188937624 0.012348827817806968 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 38220 4495 HEVIVSAA True NCI_RA007_Epitope_Rep5 824.43921740692 824.43812993586 23.943 2 -0.016460076104104163 0.012348827817806968 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 87959 12288 QVRDVIIAA True PC9_epitope_Rep1 983.5763795860698 983.5758349679301 52.119 1 -0.016486762799306307 0.012348827817806968 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 5187 18490 ALPHVVPTL True PC9_epitope_Rep5 945.5647522732099 945.56364993586 76.145 2 -0.016495721867741137 0.012348827817806968 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'ENST00000491496.1_1_7:803580-810256:+|nuORF'] 126159 20982 VPFPTPLEA True PC9_epitope_Rep1 969.5171333744498 969.51602993586 85.534 2 -0.016532077816224434 0.012348827817806968 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 13286 14313 DLYANTVL True H1975_Epitope_Rep3 907.46509780159 907.46400993586 60.401 2 -0.016532741138605495 0.012348827817806968 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000431536.1_1_1:78239597-78239909:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 17076 11815 EGQLLAQV True NCI_RA007_Epitope_Rep4 856.4654321547599 856.4648849679301 52.427 1 -0.016540147196569602 0.012348827817806968 0.9438714419765777 ['ENSG00000221890|ENST00000333039|NPTXR'] 31995 13579 GETIFVTAP True NCI_RA007_Epitope_Rep1 933.48074786573 933.47964993586 56.829 2 -0.016569034995323563 0.012348827817806968 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 13603 5786 DPRSQAAL True PC9_epitope_Rep5 856.4402800360799 856.43918993586 27.248 2 -0.016574156591487237 0.012348827817806968 0.9438714419765777 ['ENSG00000205502|ENST00000380392|C2CD4B', 'ENSG00000198535|ENST00000355522|C2CD4A'] 140898 20371 YYVGGEIVTI True PC9_epitope_Rep4 1112.57537652656 1112.5748749679299 86.502 1 -0.0166093349415364 0.012348827817806968 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 136919 11659 YKDGTELEL True PC9_epitope_Rep6 1066.51825557326 1066.51767496793 55.975 1 -0.016613500626229263 0.012348827817806968 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 64595 12460 LREERAYIL True PC9_epitope_Rep1 1161.6506071554898 1161.64897490379 52.793 3 -0.016624999167077794 0.012348827817806968 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 69439 6841 LVRPPTEQA True PC9_epitope_Rep1 1009.55564414149 1009.55454993586 31.119 2 -0.01663814827183723 0.012348827817806968 0.9438714419765777 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 95820 10541 SDGVAVLKV True PC9_epitope_Rep4 886.5123823471799 886.5118349679301 48.275 1 -0.016648709705105305 0.012348827817806968 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 136793 10735 YISPDQLA True H1975_Epitope_Rep1 905.44944773745 905.4488949679301 46.254 1 -0.01667279715392566 0.012369819341126461 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 132221 10006 VYKPAQNSW True PC9_epitope_Rep3 1091.5399940773498 1091.5388899358602 43.442 2 -0.01668582111482774 0.012389230082665703 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7'] 115352 16357 TVEFLEENSF True H1975_Epitope_Rep2 1213.5502839775297 1213.54918993586 68.137 2 -0.016729410846319973 0.012389230082665703 0.9438714419765777 ['nc|ENSG00000172943|Q9UPP1-4|PHF8', 'nc|ENSG00000172943|Q9UPP1-3|PHF8', 'ENSG00000172943|ENST00000338154|PHF8', 'nc|ENSG00000172943|Q9UPP1|PHF8', 'nc|ENSG00000172943|Q9UPP1-5|PHF8'] 5417 16632 ALVVQVAEA True PC9_epitope_Rep1 898.5123823471799 898.51128993586 68.803 2 -0.016752515559631285 0.012389230082665703 0.9438714419765777 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 99288 21356 SLDGIIVLA True PC9_epitope_Rep4 899.53278343859 899.5322349679301 90.314 1 -0.016773698087044108 0.012389230082665703 0.9438714419765777 ['ENSG00000171180|ENST00000641868|OR2M4'] 38219 5127 HEVIVSAA True NCI_RA007_Epitope_Rep4 824.43921740692 824.43812993586 26.237 2 -0.01678778022974323 0.012389230082665703 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 84964 17719 QIDGTLSTI True PC9_epitope_Rep1 946.49712620586 946.4965749679301 72.951 1 -0.016790346829301882 0.012389230082665703 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 48662 3195 KELEKTYSA True NCI_RA007_Epitope_Rep3 1067.54989005471 1067.5487899358602 17.853 2 -0.016796545398242404 0.012389230082665703 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 4060 6263 AHQQSIPAV True PC9_epitope_Rep6 949.4981292653698 949.49702993586 32.593 2 -0.016837624431025325 0.012409953462674515 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 59682 16612 LGTIHLVAV True PC9_epitope_Rep2 921.5647522732099 921.56364993586 69.142 2 -0.016839833001511647 0.012409953462674515 0.9438714419765777 ['ENST00000438671.3_1_3:45731844-45750997:+|nuORF'] 76935 16873 NVPDSFNEV True PC9_epitope_Rep1 1019.45598966987 1019.45488993586 69.726 2 -0.016875071013004343 0.01243041094726106 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 79281 6679 PGHLQEGFG True PC9_epitope_Rep6 940.4402800360799 940.43918993586 34.44 2 -0.016887813067966155 0.01243041094726106 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 22663 15081 ETSIAECLTY True H1975_Epitope_Rep2 1128.50089125696 1128.49978993586 63.16 2 -0.016896931493101775 0.01243041094726106 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 95408 20257 SAIVNLPGC True PC9_epitope_Rep1 872.4425885351999 872.44148993586 82.747 2 -0.016920174617155 0.012469728512554701 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 63512 8088 LPKEDPTAVA True PC9_epitope_Rep2 1039.5549754351498 1039.5538699358601 36.468 2 -0.016924275483067706 0.012469728512554701 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 115517 19968 TVGPLIFL True H1975_Epitope_Rep3 858.5214904789 858.5209449679301 83.567 1 -0.016926703115761825 0.012469728512554701 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'ENST00000310842.8_1_7:76239320-76240795:-|nuORF'] 25540 8795 FEQKGFRLV True H1975_Epitope_Rep3 1122.6185787512197 1122.61748993586 38.836 2 -0.016934117669729108 0.012469728512554701 0.9438714419765777 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF', 'ENST00000485076.1_1_17:49244191-49244524:+|nuORF', 'nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000512768.1_1_17:49231734-49237541:+|nuORF', 'NMT1-NME1|1|fusion'] 97601 15465 SHADVVNLL True PC9_epitope_Rep4 966.51344497634 966.51234993586 67.415 2 -0.016935170854533402 0.012469728512554701 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 7801 3452 ASYVASTKYQK True NCI_RA007_Epitope_Rep4 1244.6401020414398 1244.63845490379 19.205 3 -0.016943904982304237 0.012469728512554701 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'ENST00000522792.1_1_5:138268134-138269775:+|nuORF', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 46805 23819 IVDPFQILV True PC9_epitope_Rep3 1042.60628273202 1042.6051899358602 96.905 2 -0.016976085190862075 0.012469728512554701 0.9438714419765777 ['nc|ENSG00000144034|Q9Y3C4-2|TPRKB', 'ENST00000489476.5_1_2:73956300-73964431:-|nuORF', 'ENST00000470012.1_1_2:73959253-73964442:-|nuORF', 'ENST00000497464.5_1_2:73957656-73964442:-|nuORF', 'ENST00000463231.5_1_2:73956300-73964442:-|nuORF', 'ENSG00000144034|ENST00000272424|TPRKB', 'nc|ENSG00000144034|Q9Y3C4-3|TPRKB'] 61439 9768 LLEVLSQK True NCI_RA007_Epitope_Rep2 928.5593325396 928.55822993586 42.615 2 -0.01703460870312668 0.012469728512554701 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 57426 7460 LEIKPPPSA True H1975_Epitope_Rep2 950.54368247546 950.54258993586 33.642 2 -0.017046787167664133 0.012469728512554701 0.9438714419765777 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant', 'SRCAP|p.N716Ifs*24|1|0.21|ENSG00000080603|chr16:30713222-30713244|CAATGCCTTTCATGTGTGTATCA/-|frameshift_variant'] 47743 14542 IYQKPFQTL True PC9_epitope_Rep5 1136.62299542532 1136.62188993586 60.934 2 -0.017058388995825964 0.012469728512554701 0.9438714419765777 ['ATL2|p.K282Nfs*32|1|0.35|ENSG00000119787|chr2:38310406-38310406|C/-|frameshift_variant', 'nc|ENSG00000119787|Q8NHH9-5|ATL2', 'nc|ENSG00000119787|Q8NHH9-4|ATL2', 'nc|ENSG00000119787|Q8NHH9-2|ATL2', 'ENSG00000119787|ENST00000378954|ATL2', 'nc|ENSG00000119787|Q8NHH9-3|ATL2'] 4176 14157 AIATELAQA True PC9_epitope_Rep5 886.4759968384598 886.47488993586 59.466 2 -0.017060116205189622 0.012469728512554701 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 25282 18249 FEDVRSWMFRR True PC9_epitope_Rep1 1527.7405018723896 1527.73885490379 74.986 3 -0.017066356832586865 0.012469728512554701 0.9438714419765777 ['ENSG00000144015|ENST00000272395|TRIM43', 'ENSG00000144010|ENST00000639673|TRIM43B'] 44715 12044 IPPPVPPSA True PC9_epitope_Rep4 873.4960040070499 873.49490993586 54.133 2 -0.017095678146299892 0.012486992715920915 0.9438714419765777 ['ENSG00000120875|ENST00000240100|DUSP4', 'nc|ENSG00000120875|Q13115-2|DUSP4'] 139829 5275 YVDGVEVHN True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 26.84 2 -0.01711008276566308 0.012486992715920915 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 36289 19541 GVGPVNISV True PC9_epitope_Rep1 840.4705175352 840.46942993586 79.987 2 -0.017154270553830113 0.012486992715920915 0.9438714419765777 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q922U2'] 109531 20148 THALEWPSL True PC9_epitope_Rep5 1052.52909504048 1052.5279899358602 82.547 2 -0.017201434236112232 0.012486992715920915 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 105300 16112 STTPYLQSV True PC9_epitope_Rep5 994.4971262058599 994.4965749679301 66.965 1 -0.017241979110368826 0.012486992715920915 0.9438714419765777 ['nc|ENSG00000136108|Q8WWK9-6|CKAP2', 'ENSG00000136108|ENST00000258607|CKAP2', 'nc|ENSG00000136108|Q8WWK9|CKAP2'] 48783 8395 KEQLPPLAAA True H1975_Epitope_Rep3 1036.5916952970397 1036.5905899358602 37.275 2 -0.01725067833033519 0.012486992715920915 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 116739 19190 TYLDNGVVF True PC9_epitope_Rep6 1026.5022115862998 1026.50110993586 86.466 2 -0.017260687749417046 0.012486992715920915 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 85084 17822 QIPVKWIGV True PC9_epitope_Rep6 1038.6226015024997 1038.62150993586 81.184 2 -0.0172914366957186 0.012486992715920915 0.9438714419765777 ['ENSG00000035687|ENST00000366535|ADSS2'] 32791 12161 GIDVWEHAY True H1975_Epitope_Rep1 1088.4927095317598 1088.4916099358602 51.795 2 -0.017329224050877282 0.012486992715920915 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-4|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2', 'ENST00000541573.5_1_6:160103527-160113001:-|nuORF', 'ENST00000535459.5_1_6:160103527-160109299:-|nuORF', 'ENST00000546260.5_1_6:160103527-160113680:-|nuORF'] 45046 18123 IQNLVSASL True PC9_epitope_Rep5 943.53384606775 943.53274993586 74.72 2 -0.017337781230544348 0.012486992715920915 0.9438714419765777 ['nc|ENSG00000110330|Q13490-2|BIRC2', 'ENSG00000110330|ENST00000227758|BIRC2'] 38879 16518 HIIENIVAV True PC9_epitope_Rep4 1006.58113061334 1006.58057496793 71.509 1 -0.017369171987484482 0.012486992715920915 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 84812 11549 QHLAQLQQL True PC9_epitope_Rep4 1077.59309227937 1077.59198993586 52.185 2 -0.017382550631478994 0.012486992715920915 0.9438714419765777 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant', 'YLPM1|p.P426Hfs*9|1|0.19|ENSG00000119596|chr14:74780567-74780567|C/-|frameshift_variant', 'YLPM1|p.G95Afs*124|1|0.21|ENSG00000119596|chr14:74763768-74763768|G/-|frameshift_variant'] 127383 14594 VQQEVLQL True NCI_RA007_Epitope_Rep5 955.5338460677499 955.53274993586 62.805 2 -0.017384890432666885 0.012486992715920915 0.9438714419765777 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 138574 5517 YRPGTVALR True PC9_epitope_Rep4 1031.5876129761098 1031.58650993586 27.981 2 -0.017397143313540576 0.012486992715920915 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'H3C13|p.H40Q|1|0.1|ENSG00000183598|chr1:149813562-149813562|G/C|missense_variant', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 72021 18487 MQLEDLKQQL True PC9_epitope_Rep1 1244.64347316972 1244.6423699358602 75.901 2 -0.017409643095440654 0.012486992715920915 0.9438714419765777 ['ENSG00000269335|ENST00000594239|IKBKG', 'nc|ENSG00000269335|Q9Y6K9-2|IKBKG'] 59964 20288 LHMPFTIAA True PC9_epitope_Rep3 999.52117320907 999.52006993586 83.289 2 -0.01746375601268783 0.012500530582792138 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 10375 16551 CKDSNMELLY True H1975_Epitope_Rep2 1214.53114583942 1214.53004993586 68.888 2 -0.017469423220214244 0.012500530582792138 0.9438714419765777 ['ENSG00000168038|ENST00000301831|ULK4'] 77664 6056 PAAAAAAAAAA True PC9_epitope_Rep4 825.4344663796498 825.43336993586 30.288 2 -0.017593041569564927 0.012500530582792138 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 2923 8314 AFFAGSQR True PC9_epitope_Rep1 882.4348007328199 882.43370993586 36.814 2 -0.01761790528226911 0.012500530582792138 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'chr11:62629292-62629588|143|13.34|0.66|4.34|-|2|None,GANAB|1'] 109829 17542 THLGPLASL True PC9_epitope_Rep3 907.51271670035 907.51160993586 72.66 2 -0.01762054626642622 0.012500530582792138 0.9438714419765777 ['ENSG00000127399|ENST00000359623|LRRC61'] 40217 9184 HRGTGLVL True PC9_epitope_Rep3 851.49773534255 851.49662993586 40.265 2 -0.017638115444002445 0.012500530582792138 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 36812 21291 GVPQALFGV True PC9_epitope_Rep2 886.4912529797799 886.49070496793 87.359 1 -0.017667360585669607 0.012500530582792138 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 120801 12046 VGDEDFVHL True NCI_RA007_Epitope_Rep5 1029.47672511445 1029.47562993586 52.994 2 -0.017698889573047116 0.012500530582792138 0.9438714419765777 ['ENSG00000160213|ENST00000291568|CSTB'] 102011 2921 SPPGQVTEAVK True NCI_RA007_Epitope_Rep1 1111.5873381925899 1111.58624993586 15.197 2 -0.017703054112515007 0.012500530582792138 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 29729 16078 FVPLPVSV True H1975_Epitope_Rep3 856.50584041476 856.50474993586 67.301 2 -0.017719617597276346 0.012500530582792138 0.9438714419765777 ['CON__P12763'] 85134 9313 QITQINHGL True PC9_epitope_Rep2 1022.5508931142199 1022.5497899358601 41.161 2 -0.01772472639390214 0.012500530582792138 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 14872 21947 DYFFKPVLF True PC9_epitope_Rep4 1174.60628273202 1174.6051899358602 92.629 2 -0.017834049172137604 0.012500530582792138 0.9438714419765777 ['ENST00000369452.8_1_10:112723943-112724024:+|nuORF'] 80658 16713 PLPPPLPPP True PC9_epitope_Rep6 923.54803957991 923.54694993586 76.761 2 -0.01786032492965738 0.012500530582792138 0.9438714419765777 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 103163 10622 SQNQVQVVL True NCI_RA007_Epitope_Rep3 1013.5505587610498 1013.54946993586 48.83 2 -0.01786323729557159 0.012500530582792138 0.9438714419765777 ['ENSG00000140688|ENST00000327237|RUSF1', 'nc|ENSG00000140688|Q96GQ5-2|RUSF1', 'ENST00000568491.1_1_16:31502158-31504599:-|nuORF'] 26560 21052 FIWENIHTL True PC9_epitope_Rep5 1171.6025943339098 1171.6014899358602 86.036 2 -0.017864261174352886 0.012500530582792138 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 126927 6888 VPVEGSRYAA True PC9_epitope_Rep5 1047.5349086969097 1047.53380993586 31.464 2 -0.01789253159484557 0.012500530582792138 0.9438714419765777 ['nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3', 'nc|ENSG00000060138|P16989-2|YBX3', 'ENST00000542002.5_1_12:10853889-10868397:-|nuORF'] 7637 10971 ASLMHSFILK True NCI_RA007_Epitope_Rep4 1145.6267009067699 1145.62504490379 49.068 3 -0.017895167443971807 0.012500530582792138 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 99764 19313 SLGLPLLW True H1975_Epitope_Rep3 897.53238951577 897.53184496793 80.956 1 -0.01797846194628793 0.012500530582792138 0.9438714419765777 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'nc|ENSG00000133816|O94851-2|MICAL2', 'ENST00000530691.5_1_11:12229562-12281716:+|nuORF'] 43868 15417 ILDEAIYKV True PC9_epitope_Rep6 1062.5961119711399 1062.5950099358602 71.458 2 -0.01798440103845358 0.012500530582792138 0.9438714419765777 ['nc|ENSG00000166578|Q96DY2-3|IQCD', 'nc|ENSG00000166578|Q96DY2-2|IQCD', 'ENSG00000166578|ENST00000416617|IQCD'] 25398 12844 FEIQGTTVP True H1975_Epitope_Rep2 990.5022115863 990.5016649679301 54.515 1 -0.017996452312223576 0.012500530582792138 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3'] 34574 10197 GQFTGSTGV True PC9_epitope_Rep5 852.3977465177599 852.39664993586 44.212 2 -0.018057567653265334 0.012500530582792138 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 131766 15965 VYADQPHIF True PC9_epitope_Rep5 1088.52909504048 1088.5279899358602 66.399 2 -0.018060638204205087 0.012500530582792138 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 29458 7455 FVHPGAATV True PC9_epitope_Rep6 897.4708518883699 897.46974993586 37.911 2 -0.018080806063706503 0.012500530582792138 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2', 'nc|ENSG00000183283|Q15038-6|DAZAP2'] 108154 18113 TDRQLFDTI True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 74.869 2 -0.018086006226630345 0.012500530582792138 0.9438714419765777 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 139139 6875 YSQNQQSY True PC9_epitope_Rep5 1016.4199385143199 1016.41884993586 31.415 2 -0.018094972193788552 0.012500530582792138 0.9438714419765777 ['nc|ENSG00000270647|Q92804-2|TAF15', 'ENSG00000270647|ENST00000605844|TAF15'] 87906 11907 QVMQGMGVSA True PC9_epitope_Rep6 1006.4575869763398 1006.45648993586 57.036 2 -0.018103079003820514 0.012500530582792138 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 26349 17381 FIFSDTHEL True PC9_epitope_Rep6 1107.52367530687 1107.52256993586 79.472 2 -0.01814784564331161 0.012500530582792138 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 34714 15386 GQMIFAQAL True NCI_RA007_Epitope_Rep4 977.5004377644899 977.49934993586 66.856 2 -0.018153551014116164 0.012500530582792138 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 48770 8098 KEQLPPLAA True H1975_Epitope_Rep2 965.5545815123298 965.55348993586 36.098 2 -0.018160789791495942 0.012500530582792138 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 54946 6611 LAHAAFSAA True PC9_epitope_Rep4 857.43955176009 857.43844993586 32.588 2 -0.018210926130849486 0.012520425270037985 0.9438714419765777 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'MMGT1|p.E37Kfs*7|1|0.46|ENSG00000169446|chrX:135971082-135971082|T/-|frameshift_variant', 'ENSG00000169446|ENST00000305963|MMGT1'] 55478 13977 LAVHPSGVAL True PC9_epitope_Rep1 962.5549158654999 962.55380993586 58.6 2 -0.018243663344950485 0.012520425270037985 0.9438714419765777 ['ENSG00000187608|ENST00000649529|ISG15'] 33829 12668 GLVDEKALAQA True PC9_epitope_Rep4 1113.60298825673 1113.60188993586 56.573 2 -0.018246571939210834 0.012520425270037985 0.9438714419765777 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF', 'ENST00000511907.1_1_4:1208072-1210006:-|nuORF', 'ENSG00000175029|ENST00000309035|CTBP2', 'nc|ENSG00000175029|P56545|CTBP2', 'nc|ENSG00000175029|P56545-3|CTBP2', 'nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1'] 5983 14653 APLAIPSAA True PC9_epitope_Rep6 809.46470387877 809.46360993586 68.283 2 -0.01826835365957487 0.012520425270037985 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 57285 9159 LEGGQEDFESS True PC9_epitope_Rep6 1196.48332661652 1196.48222993586 45.353 2 -0.018268405870573403 0.012520425270037985 0.9438714419765777 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 127009 7451 VPYEIQKGQA True PC9_epitope_Rep2 1131.59242357303 1131.5913299358601 34.036 2 -0.01829590081050029 0.012540049650958009 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 20623 5527 EQEVNILKK True NCI_RA007_Epitope_Rep2 1099.62372370131 1099.62262993586 26.114 2 -0.018333907741988648 0.012540049650958009 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 39194 6669 HLGALLAR True PC9_epitope_Rep6 849.51847078713 849.51736993586 34.391 2 -0.0183643689337232 0.012540049650958009 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 67597 10920 LTETVVTEY True H1975_Epitope_Rep1 1053.52300660053 1053.52190993586 46.967 2 -0.01836780101480051 0.012540049650958009 0.9438714419765777 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 60237 16840 LIDQKVYEL True PC9_epitope_Rep5 1119.61757569171 1119.61646993586 69.785 2 -0.018379664853622385 0.012540049650958009 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000406934.5_1_22:38246060-38259001:+|nuORF', 'ENST00000476955.5_1_22:38245435-38266306:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 39510 8130 HPDYNNEL True PC9_epitope_Rep3 1000.4250238947601 1000.42392993586 36.25 2 -0.018380206714366125 0.012540049650958009 0.9438714419765777 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 139931 22354 YVGEELIYL True PC9_epitope_Rep2 1097.5644774896898 1097.5633899358602 91.474 2 -0.018435488357845843 0.012561001485253555 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000460211.5_1_2:242607386-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 46857 22801 IVGDFGIVVV True PC9_epitope_Rep5 1016.5906326678798 1016.58952993586 92.695 2 -0.018444879807822518 0.012581151610302542 0.9438714419765777 ['nc|ENSG00000157064|Q9BZQ4-2|NMNAT2', 'ENSG00000157064|ENST00000287713|NMNAT2'] 84648 14556 QHEEFVTSL True PC9_epitope_Rep5 1088.51383889916 1088.51274993586 60.989 2 -0.018446784294905906 0.012581151610302542 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 44325 16049 IMDSGELDFY True H1975_Epitope_Rep3 1188.50089125696 1188.49978993586 67.189 2 -0.018453222006369986 0.012581151610302542 0.9438714419765777 ['ENSG00000101216|ENST00000370077|GMEB2'] 7139 10034 AQYEHDLEVA True PC9_epitope_Rep4 1173.5302172392899 1173.52912993586 46.259 2 -0.018457073501518925 0.012581151610302542 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000455094.1_1_6:30454046-30454364:+|nuORF', 'ENST00000413691.2_1_4:174554896-174555010:-|nuORF'] 22247 10841 ETDNNIVVY True H1975_Epitope_Rep3 1065.4978544818498 1065.49727496793 46.781 1 -0.018483680703636728 0.012623316007213323 0.9438714419765777 ['ENSG00000150787|ENST00000280362|PTS'] 132206 7643 VYKDHQTITI True PC9_epitope_Rep4 1216.6451874218799 1216.6435349037902 36.779 3 -0.018508153911027826 0.012643726929441216 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 70087 21915 LYIHITISL True PC9_epitope_Rep5 1071.6328318330302 1071.6317299358602 89.337 2 -0.01851423735924174 0.012643726929441216 0.9438714419765777 ['L1PB1_dup500|chr1:168563691-168564880:+|1.1704651704400395|0.014663390105224|6.32|469.0|45|1|anti-sense'] 43730 22280 IITDFDMTL True PC9_epitope_Rep2 1067.52089842555 1067.52037496793 91.177 1 -0.018518668033156424 0.012643726929441216 0.9438714419765777 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF', 'ENST00000461851.1_1_7:33061643-33066527:-|nuORF', 'ENST00000464840.5_1_7:33063600-33075596:-|nuORF'] 39271 18665 HLPEELAEL True PC9_epitope_Rep2 1049.53932537101 1049.53822993586 77.16 2 -0.018548992688999545 0.012661717921527042 0.9438714419765777 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 132381 19043 VYMPDHSYVTI True PC9_epitope_Rep1 1323.61692406871 1323.6158299358601 78.039 2 -0.018575401257098962 0.012661717921527042 0.9438714419765777 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1', 'ENST00000545893.5_1_17:38345052-38350037:+|nuORF'] 2166 7150 AEMNGKLIAA True H1975_Epitope_Rep2 1016.5324661687598 1016.53136993586 32.437 2 -0.01860977336298651 0.012661717921527042 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion', 'ENST00000494880.5_1_1:185268818-185270317:-|nuORF', 'ENST00000491112.1_1_1:185269520-185270317:-|nuORF'] 54947 8004 LAHAAFSAA True PC9_epitope_Rep5 857.43955176009 857.43844993586 35.726 2 -0.018647272474115267 0.012661717921527042 0.9438714419765777 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'MMGT1|p.E37Kfs*7|1|0.46|ENSG00000169446|chrX:135971082-135971082|T/-|frameshift_variant', 'ENSG00000169446|ENST00000305963|MMGT1'] 106569 15752 SVWTKVEGV True PC9_epitope_Rep5 1003.5338460677498 1003.53274993586 65.589 2 -0.018652593255907814 0.012661717921527042 0.9438714419765777 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 131751 21191 VYADGIFDLF True NCI_RA007_Epitope_Rep3 1158.55972646242 1158.5586299358602 92.151 2 -0.0186540959205258 0.012661717921527042 0.9438714419765777 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B'] 95193 7272 SAAHAIVSV True PC9_epitope_Rep6 853.46576650793 853.46466993586 37.106 2 -0.018685257909663 0.012661717921527042 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 98629 20245 SIPEGALVAV True PC9_epitope_Rep1 954.5385970950199 954.53750993586 82.699 2 -0.018687004421958957 0.012661717921527042 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant'] 37456 19579 GYADIVQLL True NCI_RA007_Epitope_Rep2 990.5385970950199 990.5380449679301 81.099 1 -0.018691217310647695 0.012661717921527042 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 95380 10201 SAIGLADPP True H1975_Epitope_Rep2 839.4388830537499 839.43778993586 44.242 2 -0.01870127063687852 0.012661717921527042 0.9438714419765777 ['ENSG00000186838|ENST00000335426|SELENOV'] 77696 10357 PAAATVAVA True PC9_epitope_Rep5 769.4334037504899 769.4328549679301 44.822 1 -0.018701690817944504 0.012661717921527042 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 54673 7966 LAEAALELREE True H1975_Epitope_Rep1 1242.6455813446998 1242.64448993586 35.591 2 -0.01870298416189312 0.012661717921527042 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 57230 6101 LEFEHQRAP True NCI_RA007_Epitope_Rep1 1125.55670677065 1125.5550749037902 27.769 3 -0.01872102371676012 0.0126751308845037 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 11802 15268 DHLETIQQL True PC9_epitope_Rep5 1095.55603806431 1095.5549499358601 63.738 2 -0.018735361151814723 0.0126751308845037 0.9438714419765777 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000497765.1_1_3:183515808-183519351:+|nuORF'] 127594 13203 VQYNEPLKV True PC9_epitope_Rep3 1088.5866099165999 1088.58550993586 55.821 2 -0.018769406670397837 0.0126751308845037 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 69285 8205 LVPEQIGK True NCI_RA007_Epitope_Rep1 882.5174677276199 882.51636993586 35.914 2 -0.018823003209979667 0.0126751308845037 0.9438714419765777 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1', 'ENST00000570977.1_1_17:52992089-53007568:+|nuORF', 'nc|ENSG00000141198|O75674-2|TOM1L1'] 9110 14570 AVLGAVVTA True PC9_epitope_Rep6 799.48035394291 799.47924993586 67.941 2 -0.01883519157266508 0.0126751308845037 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'HLA-C|p.V320F|1|0.16|ENSG00000204525|chr6:31270023-31270023|C/A|missense_variant', 'ENST00000470363.5_1_6:31237527-31238194:-|nuORF'] 114976 6130 TTISKVSQV True PC9_epitope_Rep2 961.5444107514498 961.54330993586 28.974 2 -0.018835523024702643 0.0126751308845037 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 39946 18553 HQPTTWVSF True PC9_epitope_Rep3 1101.52434401321 1101.5232499358601 76.583 2 -0.01884062672182026 0.0126751308845037 0.9438714419765777 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF'] 97770 11165 SHGPIAVL True PC9_epitope_Rep4 792.4493881678001 792.44828993586 50.725 2 -0.018876422507461698 0.0126751308845037 0.9438714419765777 ['ENSG00000065883|ENST00000181839|CDK13', 'ENST00000465643.1_1_7:40132349-40134576:+|nuORF', 'nc|ENSG00000065883|Q14004-2|CDK13'] 85995 21989 QPILLELEA True PC9_epitope_Rep1 1024.580461907 1024.57936993586 89.402 2 -0.018932704786057145 0.0126751308845037 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 75440 9497 NQGPHSPIL True PC9_epitope_Rep3 961.4981292653699 961.49702993586 41.479 2 -0.01898281497524063 0.0126751308845037 0.9438714419765777 ['ENSG00000100147|ENST00000255784|CCDC134'] 90846 4625 RKVSINNTGL True NCI_RA007_Epitope_Rep3 1100.63020606408 1100.62910993586 25.111 2 -0.019023889293218462 0.0126751308845037 0.9438714419765777 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF'] 17368 4942 EHEARNCMNR True H1975_Epitope_Rep3 1258.52952312998 1258.52788490379 24.137 3 -0.01904848597115595 0.0126751308845037 0.9438714419765777 ['ENST00000482360.5_1_1:6645916-6646228:+|nuORF', 'ZBTB48|p.G499Afs*39|1|0.12|ENSG00000204859|chr1:6588175-6588175|G/-|frameshift_variant', 'ENSG00000204859|ENST00000377674|ZBTB48'] 96547 11621 SELPGAFEA True NCI_RA007_Epitope_Rep3 919.4287122928699 919.42760993586 52.833 2 -0.0190512155128851 0.0126751308845037 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 125866 9402 VNRQAVAL True PC9_epitope_Rep3 869.5083000262498 869.50720993586 41.101 2 -0.019051658456431975 0.0126751308845037 0.9438714419765777 ['nc|ENSG00000198788|Q02817|MUC2'] 115562 8387 TVIAKVNNV True PC9_epitope_Rep1 956.5654805492 956.56438993586 37.097 2 -0.019070537412825852 0.0126751308845037 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 75025 14572 NMDNMFESY True H1975_Epitope_Rep3 1149.41069635357 1149.4095899358601 61.418 2 -0.01909552332942188 0.0126751308845037 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__H-INV:HIT000292931'] 75310 18053 NPTVFFDI True H1975_Epitope_Rep1 951.4701831820299 951.46963496793 75.221 1 -0.019114206316490058 0.0126751308845037 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'ENST00000355968.10_1_7:44836323-44838373:+|nuORF', 'ENST00000452411.1_1_7:98083525-98083918:-|nuORF'] 71909 11163 MPQSGTGVSV True PC9_epitope_Rep5 961.45388149489 961.45333496793 47.925 1 -0.019206572341302165 0.0126751308845037 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 17369 4942 EHEARNCMNR True H1975_Epitope_Rep3 1258.52952312998 1258.52788490379 24.137 3 -0.01923823850235381 0.0126751308845037 0.9438714419765777 ['ENST00000482360.5_1_1:6645916-6646228:+|nuORF', 'ZBTB48|p.G499Afs*39|1|0.12|ENSG00000204859|chr1:6588175-6588175|G/-|frameshift_variant', 'ENSG00000204859|ENST00000377674|ZBTB48'] 46667 9748 ITVNDLPVGR True H1975_Epitope_Rep1 1082.6084079903399 1082.60730993586 42.425 2 -0.019263754236417747 0.0126751308845037 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 35217 4818 GSGTAEVELK True H1975_Epitope_Rep1 989.50293986229 989.50184993586 23.607 2 -0.01927219239745186 0.0126751308845037 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 96340 9969 SEFGKIYGP True NCI_RA007_Epitope_Rep1 996.4916469025998 996.49054993586 42.781 2 -0.019320327286323737 0.0126751308845037 0.9438714419765777 ['ENSG00000082781|ENST00000296181|ITGB5'] 87360 10080 QTDHLFFKY True H1975_Epitope_Rep3 1197.5818588893299 1197.58021490379 43.811 3 -0.01933063020270422 0.0126751308845037 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 97639 7772 SHAQTVVL True PC9_epitope_Rep1 853.46576650793 853.46521496793 34.716 1 -0.019352457057623316 0.0126751308845037 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 89 12207 AAAPPLTL True H1975_Epitope_Rep2 752.4432401582001 752.44214993586 52.036 2 -0.019369108902015045 0.0126751308845037 0.9438714419765777 ['nc|ENSG00000105327|Q96PG8-1|BBC3', 'nc|ENSG00000105327|Q96PG8|BBC3'] 13115 7499 DLSKNFEVVA True NCI_RA007_Epitope_Rep4 1120.57643915572 1120.57534993586 35.49 2 -0.01937752724715568 0.0126751308845037 0.9438714419765777 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.V1728Lfs*60|1|0.13|ENSG00000009694|chrX:124405213-124405219|AAGTGAC/-|frameshift_variant'] 68261 12687 LTRGDLWVS True PC9_epitope_Rep3 1045.55564414149 1045.5545499358602 53.824 2 -0.019388201867967168 0.0126751308845037 0.9438714419765777 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2'] 13658 13222 DQAKLIVGI True PC9_epitope_Rep1 955.5702315764698 955.56912993586 55.722 2 -0.01940237946168758 0.0126751308845037 0.9438714419765777 ['ENST00000489178.1_1_3:105269066-105271430:+|nuORF', 'nc|ENSG00000170017|Q13740-4|ALCAM', 'nc|ENSG00000170017|Q13740-2|ALCAM', 'ENSG00000170017|ENST00000306107|ALCAM'] 129337 14538 VTDTGALYLY True H1975_Epitope_Rep2 1114.55464108198 1114.5540749679299 61.077 1 -0.019408311195906414 0.0126751308845037 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 46116 7381 ITADVNHNL True PC9_epitope_Rep6 995.50360856863 995.50250993586 37.599 2 -0.01944452753264005 0.012695250407985928 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1'] 27971 19865 FQSSAVMAL True PC9_epitope_Rep3 952.4688032830398 952.4682549679301 81.647 1 -0.01945012047799909 0.012695250407985928 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 92237 8681 RQKAVSLFL True NCI_RA007_Epitope_Rep3 1060.6393141958 1060.63820993586 41.226 2 -0.019459008699078687 0.012695250407985928 0.9438714419765777 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 34634 14348 GQIGMIQAL True NCI_RA007_Epitope_Rep4 929.5004377644899 929.49988496793 62.496 1 -0.019469949609072133 0.012695250407985928 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ATP1A4|p.A859V|1|0.26|ENSG00000132681|chr1:160176588-160176588|C/T|missense_variant', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF'] 132414 10244 VYNKVHITL True PC9_epitope_Rep4 1085.62332977849 1085.62222993586 47.084 2 -0.019517848118215872 0.012714827608129014 0.9438714419765777 ['ENSG00000166228|ENST00000299299|PCBD1', 'ENST00000493228.1_1_10:72643709-72647885:-|nuORF'] 91711 19543 RPGTALELLEA True PC9_epitope_Rep5 1168.6451874218799 1168.6440899358602 80.225 2 -0.019535454720869504 0.012714827608129014 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 8822 14426 AVFPSIVG True H1975_Epitope_Rep3 788.4432401582 788.44269496793 60.844 1 -0.01954374985701854 0.012714827608129014 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 69336 22467 LVPSDFLSV True PC9_epitope_Rep3 975.52769805815 975.52660993586 91.696 2 -0.019547384898218327 0.012714827608129014 0.9438714419765777 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 8223 22492 ATIFDLSEV True PC9_epitope_Rep3 993.5018772331299 993.50078993586 91.789 2 -0.019553467401423816 0.012714827608129014 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 89312 8947 RELVKNWVP True H1975_Epitope_Rep2 1139.64512785223 1139.64349490379 39.369 3 -0.019556513124787685 0.012714827608129014 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 60540 20038 LIPPSLQGV True PC9_epitope_Rep1 922.5487678558999 922.54766993586 81.905 2 -0.019583571932619344 0.012756399389727072 0.9438714419765777 ['ENSG00000177666|ENST00000336615|PNPLA2', 'ENST00000525250.5_1_11:821680-823850:+|nuORF'] 9091 13892 AVLDLVHSA True PC9_epitope_Rep6 923.50763131991 923.50652993586 65.273 2 -0.019593140377605532 0.012756399389727072 0.9438714419765777 ['ENST00000598755.1_1_19:52104581-52104959:+|nuORF', 'ENSG00000142544|ENST00000421832|CTU1'] 89332 4320 REMDQTMAA True NCI_RA007_Epitope_Rep3 1051.44266518819 1051.4415699358601 23.732 2 -0.019600810605540066 0.012756399389727072 0.9438714419765777 ['ENST00000371870.3_1_1:47799617-47838812:+|nuORF', 'nc|ENSG00000162368|P30085|CMPK1', 'ENSG00000162368|ENST00000371873|CMPK1'] 27800 12257 FQEPNANSV True PC9_epitope_Rep1 1004.4563240230399 1004.45522993586 52.006 2 -0.019618773692736315 0.012777318670141759 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122', 'ENST00000480931.1_1_3:128580492-128584319:-|nuORF', 'ENST00000448668.2_1_3:129200375-129202705:+|nuORF'] 6940 15996 AQLPLKVEV True PC9_epitope_Rep4 995.60153170475 995.60042993586 69.461 2 -0.019656734300147007 0.012793899597542893 0.9438714419765777 ['ENSG00000157353|ENST00000288078|FCSK', 'nc|ENSG00000157353|Q8N0W3-2|FCSK', 'ENST00000485034.1_1_16:70512152-70512615:+|nuORF', 'ENST00000464499.5_1_16:70508533-70512710:+|nuORF'] 6726 10519 AQDEPAESL True PC9_epitope_Rep3 958.4243551884199 958.42324993586 45.4 2 -0.01965756726657885 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000141582|O00257-3|CBX4', 'ENSG00000141582|ENST00000269397|CBX4'] 28872 13196 FTDTSLMY True H1975_Epitope_Rep2 976.42118438428 976.42063496793 55.884 1 -0.019669571370747794 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000177426|Q15583-4|TGIF1', 'ENSG00000177426|ENST00000343820|TGIF1', 'nc|ENSG00000177426|Q15583-3|TGIF1', 'nc|ENSG00000177426|Q15583|TGIF1'] 38850 13065 HIGDAVVI True PC9_epitope_Rep5 822.4599528515 822.45884993586 55.26 2 -0.019672872828931924 0.012793899597542893 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 47848 12611 IYTFPHSAF True NCI_RA007_Epitope_Rep4 1081.5232813840498 1081.52218993586 55.534 2 -0.019686990169695592 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 75888 10303 NRDQYSHLL True PC9_epitope_Rep1 1144.56252042708 1144.5614299358601 44.515 2 -0.019691417828187563 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 84250 5613 QEVPGPAA True H1975_Epitope_Rep3 767.3813681776298 767.3808149679301 26.627 1 -0.019755801373868887 0.012793899597542893 0.9438714419765777 ['ENSG00000146278|ENST00000336032|PNRC1'] 76478 14076 NTDFGDEFY True H1975_Epitope_Rep3 1106.4192698079798 1106.41867496793 59.469 1 -0.01975651358281901 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 112465 6865 TNQELQEINR True PC9_epitope_Rep2 1243.61567819875 1243.61458993586 31.809 2 -0.01975920827941492 0.012793899597542893 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2'] 83099 10873 PYNHRMKKYL True NCI_RA007_Epitope_Rep2 1348.70741083896 1348.7063099358602 46.899 2 -0.019763249464412033 0.012793899597542893 0.9438714419765777 ['ENSG00000100412|ENST00000216254|ACO2', 'ENST00000466237.1_1_22:41911770-41917430:+|nuORF'] 89532 3827 RERPPEEVAA True NCI_RA007_Epitope_Rep2 1152.58873517492 1152.5876299358601 19.521 2 -0.01978081655480208 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 106849 22982 SYIDVLPEF True PC9_epitope_Rep3 1081.53317736141 1081.53267496793 93.667 1 -0.019783036939409235 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 48778 8468 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 37.524 2 -0.019783728225076663 0.012793899597542893 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 76846 8592 NVHTGELAAV True PC9_epitope_Rep2 1009.51925863277 1009.51816993586 38.411 2 -0.01979316496598524 0.012793899597542893 0.9438714419765777 ['ENSG00000012983|ENST00000682126|MAP4K5'] 35881 21392 GVAETLVLV True PC9_epitope_Rep3 899.5327834385898 899.53168993586 87.583 2 -0.01980624411950557 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 72202 12584 MRSPISAQL True PC9_epitope_Rep4 1001.5328005219299 1001.53170993586 56.234 2 -0.019874549322134415 0.012793899597542893 0.9438714419765777 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000367203.8_1_1:204082043-204086879:+|nuORF'] 94681 13278 RYLEKPMEI True PC9_epitope_Rep3 1177.6165301458898 1177.6154299358602 56.108 2 -0.01988661442097285 0.012793899597542893 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 48056 14632 KALSIFNEL True NCI_RA007_Epitope_Rep1 1033.58079626017 1033.5796899358602 60.966 2 -0.019969786662613877 0.012812096313081044 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 102262 5262 SPTKNNIAV True PC9_epitope_Rep3 942.5134449763399 942.51234993586 25.32 2 -0.019973045400327093 0.012812096313081044 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 96020 12051 SEALLGVAA True H1975_Epitope_Rep2 829.4545331178899 829.4539849679301 51.435 1 -0.019999688233935876 0.012812096313081044 0.9438714419765777 ['ENST00000591274.1_2_17:76972225-76973496:-|nuORF', 'ENST00000588899.1_1_17:76973220-76975958:-|nuORF', 'ENST00000587310.5_1_17:76973066-76975958:-|nuORF', 'ENST00000589906.5_2_17:76970879-76975958:-|nuORF', 'ENST00000262776.7_1_17:76972225-76976165:-|nuORF', 'ENST00000586720.5_1_17:76967660-76975958:-|nuORF'] 34369 4385 GPSSVEDIKAK True PC9_epitope_Rep5 1129.5979028762897 1129.5962549037902 21.936 3 -0.0199997827818529 0.012812096313081044 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1'] 108332 3439 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 18.017 2 -0.020039914036099348 0.012812096313081044 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 136166 22070 YGIENEVFL True PC9_epitope_Rep1 1082.52842633414 1082.5278749679298 89.701 1 -0.020061879795977476 0.012812096313081044 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 24484 21553 FAIPGSIFL True PC9_epitope_Rep6 963.5429541994699 963.54184993586 95.778 2 -0.020077319447237573 0.012812096313081044 0.9438714419765777 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 82830 21458 PVSSMESLLL True PC9_epitope_Rep4 1074.5630975907 1074.56200993586 90.728 2 -0.020097269853227673 0.012812096313081044 0.9438714419765777 ['nc|ENSG00000155393|Q7Z4Q2-2|HEATR3', 'ENSG00000155393|ENST00000299192|HEATR3', 'nc|ENSG00000155393|Q7Z4Q2-3|HEATR3', 'HEATR3|p.T435Lfs*21|1|0.25|ENSG00000155393|chr16:50084577-50084577|G/-|frameshift_variant'] 4120 8889 AHTAEVNCL True PC9_epitope_Rep5 956.43856578392 956.43746993586 39.135 2 -0.02015992607232893 0.012812096313081044 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'ENST00000486166.1_1_X:16870817-16871009:-|nuORF', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4'] 126625 6395 VPQEAQKIQA True PC9_epitope_Rep3 1110.6033226098998 1110.6022299358601 29.623 2 -0.020161634294738672 0.012812096313081044 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN'] 116637 16869 TYIKFINLF True NCI_RA007_Epitope_Rep3 1157.6484818971699 1157.64738993586 74.228 2 -0.020189149102337486 0.012812096313081044 0.9438714419765777 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50303271-50309027:+|nuORF'] 106325 7610 SVSDGIHSV True PC9_epitope_Rep1 899.4348603024702 899.43376993586 34.092 2 -0.02019648856713894 0.012828111769686706 0.9438714419765777 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 11619 10690 DHARTITVAL True PC9_epitope_Rep4 1095.60365696307 1095.60254993586 48.87 2 -0.020286027167613907 0.012828111769686706 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 17535 6444 EHINSVSAM True PC9_epitope_Rep4 986.44913046762 986.44802993586 31.884 2 -0.020287162313725706 0.012828111769686706 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 84254 7919 QEVQVPEA True NCI_RA007_Epitope_Rep4 898.4396113297398 898.43850993586 37.202 2 -0.02028942721187052 0.012828111769686706 0.9438714419765777 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'RRM2B-ZNF704|3|fusion', 'RRM2B-ZNF704|1|fusion', 'RRM2B-ZNF704|2|fusion'] 77300 13710 NYKDLNGNVF True PC9_epitope_Rep4 1182.5669371011797 1182.5658499358601 60.624 2 -0.02032869806826888 0.012828111769686706 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 45084 7003 IQRTPKIQVY True NCI_RA007_Epitope_Rep4 1244.7241064489199 1244.72245490379 33.562 3 -0.020350469637864278 0.012828111769686706 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 60611 11180 LISPYFLSF True NCI_RA007_Epitope_Rep5 1085.57973363101 1085.5786299358601 49.638 2 -0.020356995061648085 0.012828111769686706 0.9438714419765777 ['ABCA5|p.Y1038Lfs*45|1|0.17|ENSG00000154265|chr17:69267971-69267974|AAGT/-|frameshift_variant'] 21171 12519 EREKWIHAL True PC9_epitope_Rep1 1180.63529144452 1180.6336349037902 53.025 3 -0.020367802917957298 0.012828111769686706 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9'] 48557 6765 KEGMNIVEA True H1975_Epitope_Rep3 989.4851816231699 989.48408993586 30.976 2 -0.020369119159222456 0.012828111769686706 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000435399.1_1_1:45880815-45881013:+|nuORF', 'ENST00000420099.1_1_13:91924337-91924628:-|nuORF', 'ENST00000449839.1_1_19:12618945-12619074:+|nuORF', 'ENST00000454070.2_1_1:101736433-101736811:-|nuORF', 'ENST00000585753.1_1_19:30412142-30412556:+|nuORF', 'ENST00000440938.1_1_2:174350595-174351021:-|nuORF', 'ENST00000418508.1_1_2:130254157-130254292:+|nuORF', 'ENST00000562009.1_1_15:74654250-74654382:+|nuORF', 'ENST00000567565.3_1_15:76039466-76039598:+|nuORF', 'ENST00000567559.1_1_16:77926680-77926809:+|nuORF', 'ENST00000550612.1_1_12:31014923-31015109:+|nuORF'] 136449 17308 YHGLTVPL True PC9_epitope_Rep1 898.4912529797799 898.49014993586 71.392 2 -0.02039442480819274 0.012828111769686706 0.9438714419765777 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 70727 11135 MDYLVNNTP True NCI_RA007_Epitope_Rep3 1065.48009624273 1065.47898993586 50.902 2 -0.020409272934305455 0.012828111769686706 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 123629 6744 VILHLKEDQTE True NCI_RA007_Epitope_Rep4 1323.7034305739896 1323.70177490379 32.561 3 -0.020413061220337175 0.012828111769686706 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 103278 4713 SQTLPTVK True NCI_RA007_Epitope_Rep2 872.49673228304 872.49562993586 22.96 2 -0.02043053030055416 0.012828111769686706 0.9438714419765777 ['nc|ENSG00000167994|Q8TBN0-2|RAB3IL1', 'ENSG00000167994|ENST00000394836|RAB3IL1'] 718 18942 AAVLSVPAV True PC9_epitope_Rep4 825.4960040070499 825.49490993586 80.948 2 -0.020455624805959062 0.012828111769686706 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 1718 11593 AEGPVAVVV True H1975_Epitope_Rep3 839.4752685624699 839.47472496793 49.723 1 -0.02049453025812538 0.012828111769686706 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 83550 17500 QDPETFLII True NCI_RA007_Epitope_Rep4 1074.55972646242 1074.5586299358602 75.761 2 -0.020502169129527535 0.012828111769686706 0.9438714419765777 ['nc|ENSG00000198130|Q6NVY1-2|HIBCH', 'ENSG00000198130|ENST00000359678|HIBCH'] 52557 5734 KPTASPSSIAA True PC9_epitope_Rep5 1028.55022440788 1028.54912993586 27.049 2 -0.02051517588435568 0.012828111769686706 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 26007 5575 FHDESTQV True PC9_epitope_Rep1 961.41412485789 961.41302993586 26.272 2 -0.020591810784345983 0.012828111769686706 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 46128 11178 ITAIDQDKGR True NCI_RA007_Epitope_Rep1 1115.5934862021898 1115.5923899358602 47.479 2 -0.020594014708343194 0.012828111769686706 0.9438714419765777 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-6|CDH23', 'nc|ENSG00000107736|Q9H251-5|CDH23', 'CDH23|p.S944Rfs*45|1|0.39|ENSG00000107736|chr10:71705009-71705009|C/-|frameshift_variant'] 108328 3146 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 16.575 2 -0.020649341395677076 0.012848464322756811 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 107636 21249 TAIDILTTC True PC9_epitope_Rep3 949.4790336135701 949.47792993586 87.027 2 -0.02065924797993408 0.012848464322756811 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 1313 6441 AEEAARKLLP True H1975_Epitope_Rep2 1096.62405805448 1096.62296993586 29.695 2 -0.020682697290561446 0.012848464322756811 0.9438714419765777 ['ENSG00000088298|ENST00000374492|EDEM2', 'nc|ENSG00000088298|Q9BV94-2|EDEM2'] 110146 21783 TIDDGIFEV True PC9_epitope_Rep3 1007.48114178855 1007.48004993586 89.087 2 -0.020693077496338943 0.012864729904149299 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 98759 18745 SISDVIAQV True PC9_epitope_Rep6 930.5022115863 930.50110993586 84.742 2 -0.02069558385391338 0.012864729904149299 0.9438714419765777 ['ENSG00000154122|ENST00000284268|ANKH'] 109010 2863 TEVSPKTAE True H1975_Epitope_Rep1 960.47639076128 960.47528993586 14.619 2 -0.020701229354456858 0.012864729904149299 0.9438714419765777 ['nc|ENSG00000205838|Q6PF05-3|TTC23L', 'ENSG00000205838|ENST00000505624|TTC23L'] 89492 5040 REQPPRFAQP True H1975_Epitope_Rep3 1224.6363540736797 1224.63469490379 24.507 3 -0.02071027210876256 0.012864729904149299 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 16591 9552 EERNVVNVV True PC9_epitope_Rep3 1056.55637241748 1056.55526993586 41.693 2 -0.020715464408824092 0.012864729904149299 0.9438714419765777 ['ENPP1|p.G790V|1|0.38|ENSG00000197594|chr6:131884988-131884988|G/T|missense_variant'] 38854 10677 HIGDAVVI True PC9_epitope_Rep6 822.4599528515 822.45884993586 51.885 2 -0.020725299893673995 0.012864729904149299 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 116749 14335 TYLEKAIKI True PC9_epitope_Rep1 1077.6433965167298 1077.6422899358602 59.964 2 -0.020810931896597055 0.012864729904149299 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 75439 9410 NQGPHSPIL True PC9_epitope_Rep3 961.4981292653699 961.49702993586 41.133 2 -0.02085031173321145 0.012864729904149299 0.9438714419765777 ['ENSG00000100147|ENST00000255784|CCDC134'] 84280 12504 QEYFGSLAA True NCI_RA007_Epitope_Rep4 984.4552613938797 984.45471496793 55.112 1 -0.02085936525669588 0.012864729904149299 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 48007 12727 KAINVFVSA True PC9_epitope_Rep4 947.54401682863 947.54290993586 56.809 2 -0.020866391420745596 0.012864729904149299 0.9438714419765777 ['ENSG00000114209|ENST00000392750|PDCD10'] 108827 2762 TEQQQRFHEI True H1975_Epitope_Rep2 1314.6316626160599 1314.63001490379 14.652 3 -0.020945822446872077 0.012864729904149299 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1', 'ENST00000569976.5_1_16:18806770-18812824:-|nuORF', 'ENST00000431356.1_1_10:37284146-37284269:+|nuORF'] 131330 12984 VVRNEQVEI True PC9_epitope_Rep2 1084.58767254576 1084.58656993586 55.231 2 -0.02094719000756677 0.012864729904149299 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 108516 11858 TEFPGVVA True H1975_Epitope_Rep3 818.4174193331799 818.41632993586 50.759 2 -0.020973610382108057 0.012864729904149299 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 35487 5558 GTFGGLGSK True NCI_RA007_Epitope_Rep3 822.42356734278 822.42246993586 28.857 2 -0.021005805996587083 0.012864729904149299 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 18267 12822 EITALAPS True PC9_epitope_Rep2 800.42798401688 800.42743496793 54.62 1 -0.021022339926838902 0.012864729904149299 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000507366.1_1_5:79595499-79595778:-|nuORF', 'ENST00000415776.1_1_Y:19868883-19869072:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2'] 78301 7847 PASGPIRPIVR True PC9_epitope_Rep3 1161.6982260542497 1161.6965849037902 35.171 3 -0.02103423125953544 0.012864729904149299 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF'] 23940 12941 EYNPQHSLL True PC9_epitope_Rep5 1099.52982331647 1099.5287299358602 54.788 2 -0.021060789329508656 0.012864729904149299 0.9438714419765777 ['nc|ENSG00000170365|Q15797-2|SMAD1', 'ENSG00000170365|ENST00000302085|SMAD1'] 113884 10780 TRHPENWTL True PC9_epitope_Rep3 1152.56760580752 1152.56596490379 46.423 3 -0.021064551340599275 0.012864729904149299 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 69868 11012 LYAPYSTHF True NCI_RA007_Epitope_Rep5 1097.51819600361 1097.5170899358602 48.992 2 -0.021118586670939826 0.012884525874836034 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 123258 7263 VHPPPTTTY True PC9_epitope_Rep3 1011.5025459394701 1011.50144993586 32.945 2 -0.02112170210128798 0.012884525874836034 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 109559 4819 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 26.026 2 -0.021148343509028333 0.012884525874836034 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 27083 20976 FLPPDAFIHV True PC9_epitope_Rep2 1154.61243074162 1154.61132993586 86.134 2 -0.02117626518661405 0.012884525874836034 0.9438714419765777 ['ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6', 'ENSG00000130383|ENST00000588525|FUT5'] 116825 19421 TYMDRVFKQF True PC9_epitope_Rep5 1333.6488929033296 1333.64725490379 79.751 3 -0.021193752923276167 0.012884525874836034 0.9438714419765777 ['ENSG00000158201|ENST00000289119|ABHD3'] 2347 10222 AEQEFLANA True H1975_Epitope_Rep3 991.4610750503099 991.45996993586 44.366 2 -0.02122402851526333 0.012902952872493443 0.9438714419765777 ['ENSG00000007520|ENST00000007390|TSR3'] 36654 19755 GVLPQLSMV True PC9_epitope_Rep6 942.5208388559 942.51974993586 88.647 2 -0.02123020308429724 0.012902952872493443 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 6429 9652 APSGNYVAC True PC9_epitope_Rep3 880.3749028981999 880.37380993586 42.074 2 -0.021261612620254524 0.012902952872493443 0.9438714419765777 ['ENSG00000114450|ENST00000232564|GNB4'] 1606 10010 AEFQVKITA True NCI_RA007_Epitope_Rep4 1005.5494961318899 1005.54838993586 45.347 2 -0.021275209345312945 0.012902952872493443 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 6380 6087 APRQPGLMA True PC9_epitope_Rep6 939.4960210903898 939.49492993586 31.806 2 -0.021298223963301336 0.012902952872493443 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 94848 7324 RYMPQNPHI True PC9_epitope_Rep4 1154.5654976325397 1154.5638449037901 35.5 3 -0.02130036532756017 0.012902952872493443 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7'] 56987 7908 LEEDHACIP True H1975_Epitope_Rep3 1025.4487961144498 1025.4476899358601 35.391 2 -0.021304313534923326 0.012902952872493443 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 25265 12525 FEDGSQLVV True H1975_Epitope_Rep2 992.4814761417199 992.48036993586 53.272 2 -0.021307958929254453 0.012902952872493443 0.9438714419765777 ['nc|ENSG00000066135|O75164-2|KDM4A', 'ENSG00000066135|ENST00000372396|KDM4A'] 77120 5988 NYARGHYTI True PC9_epitope_Rep2 1093.5304920228102 1093.52938993586 28.419 2 -0.021309982228512846 0.012902952872493443 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 99762 19410 SLGLPLLW True H1975_Epitope_Rep1 897.53238951577 897.53184496793 80.841 1 -0.02131119276100972 0.012902952872493443 0.9438714419765777 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'nc|ENSG00000133816|O94851-2|MICAL2', 'ENST00000530691.5_1_11:12229562-12281716:+|nuORF'] 63580 22256 LPLLIAPALAA True PC9_epitope_Rep4 1061.68486740589 1061.68376993586 93.847 2 -0.021349586028882348 0.012917274476226719 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 88746 4460 RDFEGKVV True NCI_RA007_Epitope_Rep3 948.5028802926398 948.50178993586 24.356 2 -0.02136193893696946 0.012917274476226719 0.9438714419765777 ['ENSG00000066379|ENST00000332435|POLR1H'] 5800 15205 APFGGFKMS True PC9_epitope_Rep2 940.4476739156399 940.44656993586 63.749 2 -0.02137072625744065 0.012917274476226719 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 35571 15490 GTIGLIHAV True PC9_epitope_Rep5 879.51780208079 879.51670993586 64.591 2 -0.021381777776474285 0.012917274476226719 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 106688 15388 SYANVQDGF True PC9_epitope_Rep2 999.4297749220299 999.42866993586 64.472 2 -0.021383985171965474 0.012917274476226719 0.9438714419765777 ['ENSG00000152766|ENST00000371930|ANKRD22'] 7055 5030 AQVEPGEHV True PC9_epitope_Rep5 964.4614094034799 964.46030993586 24.377 2 -0.021386492255227263 0.012917274476226719 0.9438714419765777 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 102221 10967 SPSPPSVAV True PC9_epitope_Rep6 839.4388830537499 839.43778993586 53.072 2 -0.02138869841079532 0.012917274476226719 0.9438714419765777 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'COP1|p.T329Qfs*25|1|0.31|ENSG00000143207|chr1:176116666-176116666|G/-|frameshift_variant', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 135926 11521 YEVKPFLTA True H1975_Epitope_Rep2 1066.5698972233 1066.5688099358601 49.373 2 -0.021389050728967417 0.012917274476226719 0.9438714419765777 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000533676.5_1_11:61641288-61643947:-|nuORF'] 66477 14466 LSRSGELAV True PC9_epitope_Rep1 930.51344497634 930.51234993586 60.466 2 -0.021479451283687896 0.012917274476226719 0.9438714419765777 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000582450.1_1_17:7127649-7127876:+|nuORF'] 34860 9433 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42828993586 41.239 2 -0.02149147670301319 0.012917274476226719 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 42565 10790 IESPPAFTA True H1975_Epitope_Rep1 931.46509780159 931.46454496793 46.467 1 -0.021509615570002305 0.012917274476226719 0.9438714419765777 ['ENSG00000152382|ENST00000367874|TADA1'] 36394 19657 GVIAGLNVL True PC9_epitope_Rep6 854.52255310806 854.52144993586 88.269 2 -0.021521324331804367 0.012917274476226719 0.9438714419765777 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 132384 15751 VYNAVANLW True NCI_RA007_Epitope_Rep3 1048.53418042092 1048.53308993586 69.594 2 -0.021536057182853115 0.012917274476226719 0.9438714419765777 ['nc|ENSG00000172594|Q92484-2|SMPDL3A', 'ENSG00000172594|ENST00000368440|SMPDL3A'] 75640 14988 NQSEKIFSL True PC9_epitope_Rep4 1064.55022440788 1064.54912993586 65.591 2 -0.021585524661939092 0.012917274476226719 0.9438714419765777 ['ENSG00000130818|ENST00000253115|ZNF426'] 99888 17754 SLHQGLPVL True PC9_epitope_Rep4 962.5549158654999 962.55380993586 76.314 2 -0.021585847586277223 0.012917274476226719 0.9438714419765777 ['ENST00000529943.6_1_16:31724582-31724693:+|nuORF'] 123213 16029 VHLETILGA True PC9_epitope_Rep2 951.5389314481898 951.53782993586 66.91 2 -0.021590259298513468 0.012917274476226719 0.9438714419765777 ['ENSG00000165591|ENST00000374900|FAAH2'] 124632 22126 VLIDDLTTL True PC9_epitope_Rep2 1001.56447748969 1001.56338993586 90.585 2 -0.021594094643105338 0.012917274476226719 0.9438714419765777 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'ENST00000370308.8_1_6:74189644-74210455:+|nuORF', 'nc|ENSG00000135297|Q9Y2Z2-2|MTO1'] 29737 4882 FVPTSAPR True H1975_Epitope_Rep3 873.4708518883699 873.46974993586 23.904 2 -0.02164636029941641 0.012917274476226719 0.9438714419765777 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 127327 6485 VQNGKVIGV True PC9_epitope_Rep2 912.5392658013598 912.53816993586 30.359 2 -0.021658324103600825 0.012917274476226719 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 94764 19011 RYLPKGFLNQF True PC9_epitope_Rep2 1381.7506555499297 1381.7495499358602 78.491 2 -0.021665908102571296 0.012917274476226719 0.9438714419765777 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 1202 8719 AEDEAAALP True H1975_Epitope_Rep3 885.4079768482899 885.40686993586 38.539 2 -0.02166932185098166 0.012917274476226719 0.9438714419765777 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 6363 6727 APRQPGLMA True PC9_epitope_Rep2 939.4960210903898 939.49492993586 31.286 2 -0.02167908681454881 0.012917274476226719 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 1826 12043 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.48512993586 51.333 2 -0.021694793007935923 0.012917274476226719 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 71818 18486 MPAGSFITA True PC9_epitope_Rep1 893.43168949833 893.4311449679301 75.897 1 -0.021712387637042422 0.012917274476226719 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 78984 15822 PFKSPSIGF True PC9_epitope_Rep4 978.5174677276199 978.51636993586 68.783 2 -0.02171274672563227 0.012917274476226719 0.9438714419765777 ['ENST00000486283.1_1_7:129497270-129520783:-|nuORF', 'ENSG00000186591|ENST00000355621|UBE2H'] 107722 15369 TALLKIEGV True PC9_epitope_Rep6 942.57498260374 942.57388993586 71.264 2 -0.02172644746923707 0.01295873499069846 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 137893 6686 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.39156993586 31.125 2 -0.02174738064708219 0.01295873499069846 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 8222 22339 ATIFDLSEV True PC9_epitope_Rep2 993.5018772331299 993.50078993586 91.413 2 -0.02174946052965123 0.01295873499069846 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 69270 19660 LVPDVVNEV True PC9_epitope_Rep5 982.53351171458 982.5329649679301 80.679 1 -0.021767843166545946 0.012977131504417297 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 91862 7355 RPNPPPVSV True PC9_epitope_Rep4 961.53451477409 961.53340993586 35.625 2 -0.021791087992825458 0.012977131504417297 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 70850 4505 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 22.448 2 -0.021811761170540494 0.012977131504417297 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 109953 14590 THSGYFSSL True PC9_epitope_Rep3 997.45051036661 997.44940993586 61.247 2 -0.021819593754698084 0.012977131504417297 0.9438714419765777 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2'] 22001 9522 ESPEVTQNP True H1975_Epitope_Rep2 999.45090428943 999.44980993586 41.598 2 -0.021824726390252347 0.012977131504417297 0.9438714419765777 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 63241 11214 LPAEAVEAA True PC9_epitope_Rep2 869.4494477374499 869.44834993586 48.462 2 -0.02183709423341441 0.012977131504417297 0.9438714419765777 ['ENSG00000130706|ENST00000253003|ADRM1'] 84600 4525 QHDPSAVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 22.766 2 -0.0218696810956464 0.012977131504417297 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 110537 17196 TIREGETLEL True PC9_epitope_Rep3 1159.6084675599898 1159.60736993586 71.3 2 -0.02188563014747997 0.012977131504417297 0.9438714419765777 ['MDGA2|p.R624Efs*5|1|0.16|ENSG00000139915|chr14:46957594-46957594|A/-|frameshift_variant', 'MDGA2|p.G941Efs*2|1|0.22|ENSG00000139915|chr14:46855084-46855085|CC/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2', 'nc|ENSG00000139915|Q7Z553|MDGA2'] 69010 14771 LVHDLFQKV True PC9_epitope_Rep1 1097.62332977849 1097.62222993586 61.636 2 -0.02189863249012152 0.012977131504417297 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 91946 8792 RPPLNPVSA True PC9_epitope_Rep1 949.53451477409 949.53340993586 38.659 2 -0.02190674595071971 0.012977131504417297 0.9438714419765777 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'nc|ENSG00000134278|Q08AE8-4|SPIRE1', 'SPIRE1|p.G591Rfs*25|1|0.26|ENSG00000134278|chr18:12454351-12454352|-/T|frameshift_variant'] 25256 8281 FEDESPPAP True H1975_Epitope_Rep2 987.4185415319898 987.41744993586 36.803 2 -0.02192045312522545 0.012995245641838352 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D'] 94216 8345 RWPKKSAEF True PC9_epitope_Rep1 1147.61382772395 1147.61218490379 36.932 3 -0.021926376671964405 0.012995245641838352 0.9438714419765777 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000582935.1_1_18:47016781-47017264:-|nuORF'] 97638 7718 SHAQTVVL True PC9_epitope_Rep1 853.46576650793 853.46466993586 34.506 2 -0.02195480807678453 0.012995245641838352 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 54000 9560 KYLEERAMRQF True PC9_epitope_Rep4 1469.74491854649 1469.74327490379 44.39 3 -0.02195762220133126 0.012995245641838352 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 26126 10188 FHGPGEAL True PC9_epitope_Rep1 826.3973525949399 826.3962499358599 44.067 2 -0.02198021430980809 0.012995245641838352 0.9438714419765777 ['ENSG00000277150|ENST00000622749|F8A3'] 24469 17087 FAIDPHLLL True NCI_RA007_Epitope_Rep5 1037.59096702105 1037.5898699358602 72.493 2 -0.021983654857252684 0.012995245641838352 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 108152 18015 TDRQLFDTI True PC9_epitope_Rep1 1107.5560380643099 1107.5549499358601 74.087 2 -0.021991060569723078 0.012995245641838352 0.9438714419765777 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 26131 15071 FHGPLLYEA True PC9_epitope_Rep6 1045.5232813840498 1045.52218993586 70.024 2 -0.021996414647732724 0.012995245641838352 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant', 'ENST00000558539.5_1_15:79170271-79178570:+|nuORF', 'ENST00000557961.5_1_15:79165359-79178570:+|nuORF', 'ENST00000561171.5_1_15:79170562-79187198:+|nuORF', 'ENST00000559619.5_1_15:79165359-79179692:+|nuORF', 'ENST00000558522.5_1_15:79165359-79183469:+|nuORF', 'ENST00000558893.5_1_15:79165359-79184661:+|nuORF', 'nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1'] 118772 13637 VEDWDSFQA True H1975_Epitope_Rep1 1095.45090428943 1095.44980993586 57.587 2 -0.022005683333901318 0.012995245641838352 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 13654 9921 DQAAEGINLIK True H1975_Epitope_Rep1 1170.6244519773002 1170.62334993586 43.096 2 -0.022022894067928477 0.012995245641838352 0.9438714419765777 ['ENSG00000175110|ENST00000680020|MRPS22', 'ENST00000498505.5_1_3:139068252-139075853:+|nuORF'] 52020 16954 KLFNGTFLKA True PC9_epitope_Rep5 1137.65462990677 1137.65299490379 70.231 3 -0.02202864529610838 0.012995245641838352 0.9438714419765777 ['ENST00000411858.1_1_7:6854458-6863725:-|nuORF', 'ENSG00000146574|ENST00000316731|CCZ1B', 'ENSG00000122674|ENST00000325974|CCZ1'] 106956 16753 SYLDSIHFF True NCI_RA007_Epitope_Rep3 1127.52876068731 1127.52766993586 73.742 2 -0.022068013029327305 0.01301610108608376 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 101505 12590 SPAAPVITA True PC9_epitope_Rep3 825.45961849833 825.45852993586 53.452 2 -0.022096022614303587 0.01303557846699907 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 79278 7123 PGHLQEGFG True PC9_epitope_Rep4 940.4402800360799 940.43918993586 34.671 2 -0.022114192173018726 0.01303557846699907 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 18022 14885 EIIDLVLDR True NCI_RA007_Epitope_Rep4 1084.61282466444 1084.61172993586 64.718 2 -0.022121236273924292 0.01303557846699907 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 39592 11904 HPKYSDMIVA True PC9_epitope_Rep5 1159.56957995347 1159.56848993586 50.785 2 -0.02212504066905343 0.01303557846699907 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 105900 23483 SVLDGLLYV True PC9_epitope_Rep3 977.54334812229 977.54224993586 95.606 2 -0.022131945734868694 0.01303557846699907 0.9438714419765777 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 28629 19399 FSRQWADTF True PC9_epitope_Rep5 1156.53015766964 1156.5290699358602 79.664 2 -0.02215169664773913 0.01303557846699907 0.9438714419765777 ['nc|ENSG00000105875|A4D1P6-2|WDR91', 'ENSG00000105875|ENST00000354475|WDR91', 'nc|ENSG00000105875|A4D1P6-3|WDR91', 'ENST00000466182.5_1_7:134882699-134896254:-|nuORF'] 123355 7112 VIADNVKDWSK True NCI_RA007_Epitope_Rep5 1273.6666511424498 1273.66501490379 34.036 3 -0.02215797613124321 0.01305449936628644 0.9438714419765777 ['nc|ENSG00000111669|P60174-4|TPI1', 'ENSG00000111669|ENST00000396705|TPI1', 'nc|ENSG00000111669|P60174-3|TPI1'] 102496 6365 SPYIPPHAA True PC9_epitope_Rep6 951.48141657207 951.48030993586 33.062 2 -0.02217154278626311 0.01305449936628644 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 25293 16048 FEEDGLGVLP True H1975_Epitope_Rep2 1074.5233409536997 1074.5222499358601 66.929 2 -0.022179049048767992 0.01305449936628644 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000435945.1_1_Y:28761086-28769767:-|nuORF'] 93894 13424 RVIDREGVYEI True PC9_epitope_Rep5 1347.7146639640298 1347.71302490379 56.651 3 -0.022194845256171807 0.01305449936628644 0.9438714419765777 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000533200.5_1_11:43904193-43919192:+|nuORF'] 101766 5082 SPHPPSEVTA True PC9_epitope_Rep4 1020.48762415132 1020.48652993586 26.198 2 -0.022198696400411094 0.01305449936628644 0.9438714419765777 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 125851 12275 VNQIGSVTESL True NCI_RA007_Epitope_Rep2 1145.59281749585 1145.59227496793 52.349 1 -0.022234350998451766 0.01305449936628644 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 40068 10617 HRAPIFMRV True PC9_epitope_Rep2 1125.62295293901 1125.6213149037899 46.153 3 -0.022247246324064208 0.01305449936628644 0.9438714419765777 ['ENSG00000197165|ENST00000335715|SULT1A2', 'ENSG00000196502|ENST00000314752|SULT1A1', 'ENST00000567998.5_1_16:28619793-28620024:-|nuORF'] 108319 6830 TEDLKTLSA True H1975_Epitope_Rep3 976.50769088956 976.50658993586 31.227 2 -0.022252550553539894 0.01305449936628644 0.9438714419765777 ['ENSG00000121957|ENST00000264126|GPSM2', 'GPSM1|p.G58S|2|0.32|ENSG00000160360|chr9:136334550-136334550|G/A|missense_variant', 'nc|ENSG00000160360|Q86YR5-4|GPSM1', 'nc|ENSG00000160360|Q86YR5|GPSM1', 'ENSG00000160360|ENST00000440944|GPSM1', 'nc|ENSG00000160360|Q86YR5-3|GPSM1'] 4095 11428 AHSPLAAQL True PC9_epitope_Rep3 906.4923156089401 906.49120993586 48.957 2 -0.022274771046527524 0.013069549427811326 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 103183 12008 SQPPVFKV True PC9_epitope_Rep2 900.5069030439199 900.50580993586 51.507 2 -0.022310147429478618 0.013069549427811326 0.9438714419765777 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 117428 13680 VADPVEAVL True NCI_RA007_Epitope_Rep3 911.4963979298699 911.49530993586 61.122 2 -0.022312131894633155 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF', 'ENST00000537905.5_1_11:71735188-71747007:-|nuORF'] 69848 9447 LYAEKPPRCSC True NCI_RA007_Epitope_Rep1 1265.58966377505 1265.58856993586 40.74 2 -0.0223131990473286 0.013069549427811326 0.9438714419765777 ['ENST00000493450.1_1_20:37659368-37662889:+|nuORF'] 101739 14907 SPHGIIVIA True PC9_epitope_Rep3 905.5334521449299 905.53234993586 62.475 2 -0.022377567843215734 0.013069549427811326 0.9438714419765777 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 2871 5520 AEYLQPKAA True NCI_RA007_Epitope_Rep4 989.5181960036099 989.51708993586 27.827 2 -0.022396986229981083 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000069702|Q03167-2|TGFBR3', 'chr1:91899697-91905826|240|11.2|0.0|12.19|-|ENST00000370399|TGFBR3,TGFBR3', 'ENSG00000069702|ENST00000212355|TGFBR3', 'ENST00000532540.5_1_1:92149298-92327033:-|nuORF'] 132379 5624 VYMNRVKEI True NCI_RA007_Epitope_Rep3 1150.6168644990598 1150.61521490379 29.112 3 -0.02240376989078384 0.013069549427811326 0.9438714419765777 ['ENSG00000197223|ENST00000410067|C1D', 'ENST00000455013.2_1_10:81784495-81784867:-|nuORF'] 115140 6018 TVADHIQKV True PC9_epitope_Rep3 1009.5556441414899 1009.55454993586 28.202 2 -0.022416137110767103 0.013069549427811326 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 10122 18977 AYYPAQGVQQF True PC9_epitope_Rep3 1270.59823722946 1270.5971499358602 78.217 2 -0.022475446985613007 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 115638 20157 TVISSSFVNV True PC9_epitope_Rep2 1051.55497543515 1051.5538699358601 82.947 2 -0.022517880376420326 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000151327|Q8N128|FAM177A1', 'chr14:35045194-35045988|299|22.5|0.93|4.6|+|ENST00000555211|FAM177A1,FAM177A1', 'ENSG00000151327|ENST00000280987|FAM177A1'] 105759 21137 SVIDIINGEA True PC9_epitope_Rep1 1029.5342399905699 1029.5331499358601 86.134 2 -0.022523077394695244 0.013069549427811326 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant'] 89161 7133 REHPLWQAA True NCI_RA007_Epitope_Rep4 1106.5621265042598 1106.56102993586 34.056 2 -0.022528780215929255 0.013069549427811326 0.9438714419765777 ['ENSG00000198113|ENST00000357503|TOR4A'] 78416 7133 PAYHSSLMD True NCI_RA007_Epitope_Rep1 1019.43823143075 1019.43712993586 31.735 2 -0.022564252264732847 0.013069549427811326 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000548878.6_1_12:110874955-110888065:-|nuORF', 'ENST00000471641.1_1_12:110880867-110888065:-|nuORF', 'ARPC3|p.R25Qfs*16|1|0.26|ENSG00000111229|chr12:110445479-110445489|GACTTCTGATA/-|frameshift_variant', 'ENST00000543613.1_1_11:73633096-73633237:-|nuORF', 'ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 92065 7824 RPRVTEPISA True PC9_epitope_Rep5 1124.6302060640799 1124.62855490379 35.039 3 -0.02256510905480961 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 97039 12606 SEWLIRPP True NCI_RA007_Epitope_Rep4 996.5392658013599 996.53816993586 55.513 2 -0.022590841143221314 0.013069549427811326 0.9438714419765777 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 30819 10495 GAPQVVAVTG True PC9_epitope_Rep5 897.4919812557698 897.49088993586 45.356 2 -0.022597196499028534 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF'] 83105 21026 PYNPILGETF True PC9_epitope_Rep4 1149.57062549929 1149.5695299358601 89.039 2 -0.02260552425134375 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 132757 11356 VYSPHVLNL True NCI_RA007_Epitope_Rep5 1040.5654805492 1040.5643899358602 50.332 2 -0.02260648703233254 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 133525 14284 WHHTFYNEL True PC9_epitope_Rep2 1245.55670677065 1245.55560993586 60.208 2 -0.02262941944694798 0.013069549427811326 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ENST00000428275.1_1_X:53172740-53172956:-|nuORF', 'ENST00000418351.1_1_15:44281927-44282254:-|nuORF', 'POTEE|p.R795L|1|0.3|ENSG00000188219|chr2:131263839-131263839|G/T|missense_variant', 'ENST00000520036.1_1_8:85861015-85861132:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000196604|ENST00000409914|POTEF'] 8943 13628 AVGPIVQL True H1975_Epitope_Rep3 795.48543932335 795.48489496793 57.708 1 -0.022644461687532768 0.013069549427811326 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.K134Rfs*14|1|0.17|ENSG00000112531|chr6:163478888-163478888|A/-|frameshift_variant'] 6364 6817 APRQPGLMA True PC9_epitope_Rep2 939.4960210903898 939.49492993586 31.626 2 -0.0226551117117221 0.013069549427811326 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 48385 6266 KEAPSPFQA True H1975_Epitope_Rep2 973.4868958753299 973.48578993586 29.047 2 -0.022664323407989823 0.013069549427811326 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 79468 8300 PGPPPPPPP True PC9_epitope_Rep2 851.45413919507 851.45304993586 37.29 2 -0.022764227607792387 0.01309038701095792 0.9438714419765777 ['ENST00000375142.5_2_1:19811931-19811970:-|nuORF', 'ENST00000584336.1_1_17:37686825-37687566:+|nuORF', 'ENSG00000136928|ENST00000259455|GABBR2', 'ENSG00000125966|ENST00000246186|MMP24', 'ENSG00000099822|ENST00000251287|HCN2', 'HCN2|p.R345Pfs*12|1|0.19|ENSG00000099822|chr19:603945-603945|G/-|frameshift_variant', 'HCN2|p.Y504Mfs*54|1|0.23|ENSG00000099822|chr19:610331-610331|T/-|frameshift_variant', 'nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'ENSG00000134775|ENST00000590592|FHOD3', 'FHOD3|p.M1132Rfs*19|1|0.5|ENSG00000134775|chr18:36744120-36744139|CCATGGTGGTAGAAAACTTC/-|frameshift_variant', 'ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENSG00000164916|ENST00000328914|FOXK1', 'ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12'] 3709 12763 AGSIHGALQAI True PC9_epitope_Rep2 1036.5665431783598 1036.5654499358602 54.399 2 -0.022778644233124146 0.01310983976862505 0.9438714419765777 ['ENSG00000169208|ENST00000641040|OR10G3'] 74882 7421 NLQTVNVDEN True NCI_RA007_Epitope_Rep3 1144.53603089572 1144.5349299358602 36.315 2 -0.02279355822393937 0.01310983976862505 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 107249 10530 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59143490379 45.491 3 -0.022807895958588096 0.01310983976862505 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 37246 19718 GVVFSVTTV True PC9_epitope_Rep4 907.5014833103099 907.50038993586 83.969 2 -0.022907057097141057 0.01310983976862505 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4', 'ENST00000489758.1_1_1:25072044-25124343:+|nuORF'] 91803 19757 RPLLPVPAV True PC9_epitope_Rep3 960.6120368187999 960.61092993586 81.223 2 -0.022928767590206147 0.01310983976862505 0.9438714419765777 ['DHTKD1|p.P894L|1|0.23|ENSG00000181192|chr10:12120809-12120809|C/T|missense_variant'] 24772 16592 FAYEGPMYL True H1975_Epitope_Rep3 1089.4841189940098 1089.48302993586 69.318 2 -0.022943524310619915 0.01310983976862505 0.9438714419765777 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'RNF145|p.P393Lfs*7|1|0.15|ENSG00000145860|chr5:159163023-159163023|G/-|frameshift_variant'] 103282 14248 SQTLVSQGL True PC9_epitope_Rep2 931.4974605590301 931.49691496793 60.072 1 -0.022981216928476583 0.013149563088353244 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 113043 13990 TPVETVNIS True PC9_epitope_Rep1 958.49712620586 958.4965749679301 58.651 1 -0.02300527876802268 0.013149563088353244 0.9438714419765777 ['ENSG00000169676|ENST00000304374|DRD5'] 139475 17882 YTGEGQWEV True PC9_epitope_Rep3 1067.45598966987 1067.4548899358601 73.983 2 -0.023008680301473877 0.013149563088353244 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 8830 20671 AVFPSIVG True PC9_epitope_Rep5 788.4432401582 788.44269496793 84.566 1 -0.02303204553815153 0.013149563088353244 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 85659 19662 QLQLSLAI True PC9_epitope_Rep6 884.5331177917599 884.53202993586 88.288 2 -0.02309035493030229 0.013149563088353244 0.9438714419765777 ['ENSG00000089775|ENST00000608382|ZBTB25'] 102534 10529 SQAEKVYIM True PC9_epitope_Rep4 1067.5321318155898 1067.53102993586 48.225 2 -0.023114800103270036 0.013149563088353244 0.9438714419765777 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000515766.1_1_4:1332171-1332954:+|nuORF'] 89487 2761 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.63469490379 14.648 3 -0.02311592103687629 0.013149563088353244 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 54982 20879 LAIGASFTV True PC9_epitope_Rep5 877.49091862661 877.49037496793 85.363 1 -0.023155856521073107 0.013149563088353244 0.9438714419765777 ['nc|ENSG00000104635|Q15043-2|SLC39A14', 'nc|ENSG00000104635|Q15043-3|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 91761 9117 RPKPSSSPVIF True PC9_epitope_Rep2 1213.68190728377 1213.68025490379 40.408 3 -0.02323686516408134 0.013149563088353244 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000547987.2_1_12:53854819-53861193:+|nuORF'] 97679 4011 SHDHGYTTL True PC9_epitope_Rep4 1029.45157299577 1029.4504699358602 21.673 2 -0.02327778133754302 0.013170391945798771 0.9438714419765777 ['nc|ENSG00000099956|Q12824-2|SMARCB1'] 102367 18673 SPVLPLTSA True PC9_epitope_Rep1 883.50148331031 883.50038993586 76.615 2 -0.02333513622257144 0.013188158089088646 0.9438714419765777 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1'] 84554 8704 QHAVGIVV True PC9_epitope_Rep6 821.47593726881 821.47484993586 43.333 2 -0.02334961823114713 0.013188158089088646 0.9438714419765777 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF', 'ENST00000397467.2_1_3:1947466-1947595:+|nuORF', 'ENST00000493466.1_1_4:37823021-37823243:+|nuORF', 'ENST00000471393.1_1_8:54445924-54446098:+|nuORF', 'ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 119149 12589 VEIPDPVEA True H1975_Epitope_Rep2 967.4862271689899 967.48512993586 53.521 2 -0.023353524992660784 0.013188158089088646 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 136760 19728 YIPTELDQV True PC9_epitope_Rep2 1076.53899101784 1076.53847496793 81.273 1 -0.02337542293920586 0.013188158089088646 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 14903 15412 DYKESFNTI True PC9_epitope_Rep5 1115.5135045459901 1115.51297496793 64.291 1 -0.02342052795220268 0.013188158089088646 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 105744 7674 SVHTDMASV True PC9_epitope_Rep5 945.42258136661 945.42148993586 34.462 2 -0.02343314585610597 0.013188158089088646 0.9438714419765777 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000576840.5_1_17:7130280-7131353:-|nuORF', 'ENST00000571745.1_1_17:7130492-7131139:-|nuORF'] 28503 7692 FSGGFGAR True PC9_epitope_Rep5 797.3820368839699 797.38092993586 34.531 2 -0.02348696173900243 0.013188158089088646 0.9438714419765777 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 5638 14335 APAGGFQNIA True PC9_epitope_Rep3 944.4715801643599 944.47048993586 60.226 2 -0.02349024637004404 0.013188158089088646 0.9438714419765777 ['ENSG00000037897|ENST00000324871|METTL1'] 94520 13497 RYIDRIHIFF True NCI_RA007_Epitope_Rep4 1378.7509899031 1378.74934490379 59.126 3 -0.02350999116862444 0.013188158089088646 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 52731 16373 KQLEAIDQLHL True PC9_epitope_Rep2 1306.7245003717399 1306.72285490379 68.224 3 -0.02352326186910003 0.013188158089088646 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 35819 17363 GTYTGFIKV True PC9_epitope_Rep3 984.5280324113198 984.52692993586 71.958 2 -0.023535805524638683 0.013188158089088646 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 99560 11916 SLFEKGLKNV True PC9_epitope_Rep2 1133.6444591458899 1133.64280490379 51.159 3 -0.02354701445576558 0.013188158089088646 0.9438714419765777 ['nc|ENSG00000118564|Q9UKA1-2|FBXL5', 'ENSG00000118564|ENST00000341285|FBXL5'] 102809 17412 SQFPEEILL True NCI_RA007_Epitope_Rep4 1074.55972646242 1074.5586299358602 75.397 2 -0.023560933365627933 0.013204522443469457 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 95239 7840 SADETWDSA True NCI_RA007_Epitope_Rep3 980.37231961556 980.37177496793 37.962 1 -0.023585956531746145 0.013204522443469457 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 69511 19901 LVSPASFENV True PC9_epitope_Rep2 1061.5393253710101 1061.53822993586 81.944 2 -0.023635291936848574 0.013204522443469457 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 114391 15106 TSDQATLLLY True H1975_Epitope_Rep1 1123.57610480255 1123.57557496793 63.359 1 -0.023644168172875367 0.013204522443469457 0.9438714419765777 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM'] 45134 8555 IQVTKVTQV True PC9_epitope_Rep6 1014.6073453611799 1014.60624993586 42.674 2 -0.023652924107091307 0.013204522443469457 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1', 'nc|ENSG00000095139|P48444-2|ARCN1'] 120119 14939 VFIRGGEEF True PC9_epitope_Rep5 1052.52909504048 1052.5279899358602 62.467 2 -0.02366044932010264 0.013204522443469457 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'nc|ENSG00000173821|Q63HN8-5|RNF213', 'ENST00000573548.1_1_17:78263625-78265730:+|nuORF'] 71003 9835 MEQQTLSIA True H1975_Epitope_Rep2 1019.4957463068699 1019.4951749679301 42.816 1 -0.023660636302799833 0.013204522443469457 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4'] 8226 20469 ATIFDLSEV True PC9_epitope_Rep6 993.5018772331299 993.50078993586 91.451 2 -0.02366460514915842 0.013204522443469457 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 17383 12453 EHFDASHVAL True PC9_epitope_Rep3 1124.5250722892 1124.52343490379 52.924 3 -0.023695164443441365 0.013204522443469457 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH'] 90222 17710 RHLDVRILL True PC9_epitope_Rep5 1133.70331143469 1133.70166490379 73.139 3 -0.023699598948998788 0.013204522443469457 0.9438714419765777 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 12454 10980 DKNSGVVITV True PC9_epitope_Rep5 1030.56587447202 1030.56476993586 47.224 2 -0.023744460255252765 0.013204522443469457 0.9438714419765777 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-1|CDH26'] 119718 8139 VETFSGVYK True NCI_RA007_Epitope_Rep2 1028.5178616504397 1028.51676993586 36.293 2 -0.023745498413172684 0.013204522443469457 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000484240.1_1_17:44798950-44799232:-|nuORF'] 71952 12800 MPTTLEGA True PC9_epitope_Rep1 818.3844049527399 818.38385496793 54.109 1 -0.02379147728613674 0.013204522443469457 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 3384 12258 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep1 1043.58627587973 1043.5857749679299 52.174 1 -0.02380623782315982 0.013204522443469457 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 5780 17163 APELQGVEV True PC9_epitope_Rep5 940.4865615221598 940.48546993586 71.039 2 -0.023823755994516454 0.013204522443469457 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 106795 13267 SYGDLKNAI True PC9_epitope_Rep5 979.49746055903 979.49636993586 56.042 2 -0.023834615831793204 0.013204522443469457 0.9438714419765777 ['nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5', 'ENST00000554465.5_1_14:70237039-70238175:+|nuORF', 'ENST00000554929.1_1_14:70237619-70238175:+|nuORF'] 25433 11034 FELFADKVPK True NCI_RA007_Epitope_Rep2 1192.6492101731599 1192.64810993586 47.52 2 -0.023841686965664174 0.013204522443469457 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA'] 123363 13531 VIAENLEAA True PC9_epitope_Rep5 928.4865615221598 928.48546993586 57.07 2 -0.02389298902607972 0.013224500126550241 0.9438714419765777 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 101825 19766 SPILTSSTL True PC9_epitope_Rep4 917.5069626135701 917.50641496793 84.154 1 -0.02389539816442734 0.013224500126550241 0.9438714419765777 ['ENST00000544327.1_1_12:125284722-125292339:-|nuORF'] 60955 12455 LLAELEQLK True NCI_RA007_Epitope_Rep2 1055.6226610721499 1055.6215699358602 53.056 2 -0.023921610361098546 0.013224500126550241 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 106431 6359 SVTSKGVVTC True PC9_epitope_Rep3 979.5008316873099 979.49972993586 29.486 2 -0.023922120750204213 0.013224500126550241 0.9438714419765777 ['ENSG00000075914|ENST00000265564|EXOSC7', 'ENST00000461361.5_1_3:45016905-45052828:+|nuORF'] 45265 9121 IRYPDSHQL True PC9_epitope_Rep1 1127.57235683479 1127.57071490379 39.935 3 -0.02392926787910267 0.013243077961240801 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 138049 21126 YQDPSVLYI True PC9_epitope_Rep2 1096.54407639828 1096.5429699358601 86.72 2 -0.02393721144275118 0.013243077961240801 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 99547 23104 SLFAFSLSV True PC9_epitope_Rep4 969.51713337445 969.51602993586 97.088 2 -0.023937694929189526 0.013243077961240801 0.9438714419765777 ['ENST00000507678.5_1_4:177241188-177241371:+|nuORF', 'ENST00000513139.1_1_4:177241188-177248429:+|nuORF', 'ENSG00000129128|ENST00000503362|SPCS3'] 28540 20977 FSIPVVSDV True PC9_epitope_Rep4 961.51204799401 961.51094993586 88.849 2 -0.02393781240284905 0.013243077961240801 0.9438714419765777 ['ENSG00000126749|ENST00000599672|EMG1'] 86749 6314 QRLETQVSA True PC9_epitope_Rep5 1030.5407223533398 1030.5396299358601 29.261 2 -0.02394349342802331 0.013243077961240801 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 102188 14532 SPSGVILQEA True PC9_epitope_Rep4 999.5236753068698 999.52256993586 63.812 2 -0.023978513581677744 0.013243077961240801 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 118731 13061 VEDEFDLEA True H1975_Epitope_Rep3 1065.4502355830898 1065.4491299358601 55.48 2 -0.02401589715531082 0.013243077961240801 0.9438714419765777 ['nc|ENSG00000163950|Q14493-2|SLBP', 'ENSG00000163950|ENST00000489418|SLBP'] 86606 11416 QRDLDGTCSL True PC9_epitope_Rep5 1106.50262259246 1106.5015299358602 48.911 2 -0.02401891625799194 0.013243077961240801 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD', 'ENST00000511682.1_1_4:169819766-169825111:+|nuORF'] 69704 18260 LVYQEPIPTA True PC9_epitope_Rep2 1129.60192562757 1129.60082993586 75.558 2 -0.02403115255408312 0.013243077961240801 0.9438714419765777 ['ENSG00000106588|ENST00000223321|PSMA2', 'ENST00000433579.1_1_7:42952135-42964395:-|nuORF', 'ENST00000411875.1_1_7:42961455-42966220:-|nuORF'] 27707 7197 FQDNHGVTV True PC9_epitope_Rep4 1015.4723084403499 1015.47120993586 34.986 2 -0.024081443431876987 0.013261648745519713 0.9438714419765777 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2'] 5979 16697 APLAAAALPA True PC9_epitope_Rep5 864.5069030439199 864.50580993586 69.229 2 -0.0241651397408112 0.013261648745519713 0.9438714419765777 ['ENST00000366600.7_1_1:235658098-235667703:-|nuORF'] 17179 7090 EHAGGEVEL True PC9_epitope_Rep2 939.42977492203 939.42866993586 32.669 2 -0.024180454031073263 0.013261648745519713 0.9438714419765777 ['ENSG00000218891|ENST00000325421|ZNF579'] 136464 6487 YHGNTNPEL True PC9_epitope_Rep3 1043.46722305991 1043.4661299358602 29.978 2 -0.024182837084439253 0.013261648745519713 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 6192 5215 APQPQRTL True PC9_epitope_Rep3 909.50321464581 909.50210993586 25.141 2 -0.02418575064124239 0.013261648745519713 0.9438714419765777 ['ENST00000583776.1_1_18:2906615-2908961:+|nuORF'] 133207 6222 WEDDKVTEA True H1975_Epitope_Rep2 1091.4771190372699 1091.4760299358602 28.897 2 -0.024191503215223578 0.013261648745519713 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 71128 18318 M[Oxidation]ETVWTILP True H1975_Epitope_Rep3 1104.55253328744 1104.55197496793 76.767 1 -0.02420214913481083 0.013261648745519713 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 40708 4860 HTQREKIT True PC9_epitope_Rep5 1011.5461420869499 1011.54504993586 23.735 2 -0.024213169858397762 0.013261648745519713 0.9438714419765777 ['ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 65865 9275 LSKTSVVDL True PC9_epitope_Rep6 960.54916177872 960.54806993586 45.83 2 -0.02427817353685544 0.013261648745519713 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4'] 107915 21003 TAVPSLFSV True PC9_epitope_Rep4 919.50148331031 919.50038993586 88.95 2 -0.024336996555898785 0.013280772392857895 0.9438714419765777 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1'] 81621 8990 PRQLAPTL True PC9_epitope_Rep4 894.5287011176599 894.52760993586 42.136 2 -0.024345534862669476 0.013280772392857895 0.9438714419765777 ['ENST00000470487.5_1_3:167813015-167813639:-|nuORF'] 69267 18787 LVPDVVNEV True PC9_epitope_Rep4 982.53351171458 982.53240993586 80.349 2 -0.02435023583559312 0.013280772392857895 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'ENST00000498179.1_1_X:129054707-129055571:+|nuORF'] 23653 14205 EYGKVEFVF True NCI_RA007_Epitope_Rep5 1116.54916177872 1116.5480699358602 61.33 2 -0.024379358295513617 0.013280772392857895 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'ENST00000479185.1_1_2:218746916-218750490:-|nuORF'] 86226 16013 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.4631649679301 66.406 1 -0.024383060135351603 0.013280772392857895 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 86096 13779 QPQLPYSQA True PC9_epitope_Rep5 1030.5083595959 1030.5072699358602 58.02 2 -0.024396032977992414 0.013280772392857895 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 104156 12434 SSAPGLTSV True PC9_epitope_Rep1 817.4181476091701 817.4175949679301 52.69 1 -0.024409304070405882 0.013280772392857895 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1'] 70530 17217 LYTGTVSSF True PC9_epitope_Rep4 973.47566248529 973.47456993586 74.233 2 -0.024419934924709324 0.013299890397099738 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 34879 8004 GQVPPGESV True PC9_epitope_Rep1 868.42904664604 868.4279499358599 35.608 2 -0.024421024355342456 0.013299890397099738 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 85999 21020 QPILLELEA True PC9_epitope_Rep4 1024.580461907 1024.57936993586 89.015 2 -0.024433409954981732 0.013299890397099738 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 5697 19428 APAPVFFVT True PC9_epitope_Rep6 947.5116540711899 947.51054993586 87.391 2 -0.024454713634415527 0.013299890397099738 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'nc|ENSG00000108846|O15438-5|ABCC3', 'nc|ENSG00000108846|O15438-3|ABCC3'] 89082 4476 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 22.335 3 -0.02446697355249868 0.013299890397099738 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 132115 9579 VYIPSKTDL True NCI_RA007_Epitope_Rep2 1034.5648118428599 1034.56370993586 41.875 2 -0.024509200535531295 0.013299890397099738 0.9438714419765777 ['ENSG00000145912|ENST00000274606|NHP2'] 48776 8275 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 36.78 2 -0.02452666586239995 0.013299890397099738 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 78993 14483 PFLGAPAAT True PC9_epitope_Rep5 843.44905381463 843.44794993586 60.71 2 -0.024567532070883913 0.013319844882819086 0.9438714419765777 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 83292 6101 QAIADEQKK True NCI_RA007_Epitope_Rep5 1029.54547338061 1029.54436993586 30.149 2 -0.02459048203865381 0.013319844882819086 0.9438714419765777 ['ENST00000575500.5_2_17:78178032-78182141:+|nuORF', 'ENSG00000141527|ENST00000648509|CARD14'] 88937 6739 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.54984993586 30.876 2 -0.02461510235796408 0.013319844882819086 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 140318 7818 YYEEQHPEL True NCI_RA007_Epitope_Rep5 1206.5193182024198 1206.51822993586 36.772 2 -0.024622127394722634 0.013319844882819086 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 2771 7490 AEVDAAMAA True H1975_Epitope_Rep2 847.3745685450299 847.37346993586 33.76 2 -0.02467941706169255 0.013338109486282607 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 59162 11524 LGEYGFQNA True NCI_RA007_Epitope_Rep1 997.4505103666099 997.44940993586 48.793 2 -0.02468551813508883 0.013338109486282607 0.9438714419765777 ['CON__P02769'] 46761 14209 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.45752993586 59.478 2 -0.024709653328896748 0.013338109486282607 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 44670 21175 IPLTLLPAA True PC9_epitope_Rep2 907.5742543277498 907.57314993586 86.905 2 -0.024717255388233394 0.013338109486282607 0.9438714419765777 ['ENSG00000116903|ENST00000366645|EXOC8'] 28358 4538 FSDHHENKYL True H1975_Epitope_Rep2 1288.58364979448 1288.5820049037902 22.565 3 -0.024739909486007086 0.013338109486282607 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 11621 12242 DHARTITVAL True PC9_epitope_Rep5 1095.60365696307 1095.60254993586 52.076 2 -0.02475231046931328 0.013338109486282607 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 56986 8016 LEEDHACIP True H1975_Epitope_Rep2 1025.4487961144498 1025.4476899358601 35.781 2 -0.024773344167311213 0.013338109486282607 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 100250 15332 SLLQPLNV True NCI_RA007_Epitope_Rep4 882.51746772762 882.51636993586 66.633 2 -0.024817420693373678 0.013338109486282607 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546'] 34882 7871 GQVPPGESV True PC9_epitope_Rep2 868.42904664604 868.4279499358599 35.643 2 -0.024822316260591698 0.013338109486282607 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 5844 6951 APGIPRKD True PC9_epitope_Rep2 852.4817509252399 852.48064993586 32.136 2 -0.02484278373370163 0.013338109486282607 0.9438714419765777 ['ENST00000567570.5_3_15:75182414-75182582:+|nuORF'] 68643 18045 LVAPPLPAA True PC9_epitope_Rep4 847.51673945163 847.51564993586 77.476 2 -0.024874439936030283 0.013351865891668773 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 139498 13712 YTIDTDNSTV True PC9_epitope_Rep1 1127.4982484046702 1127.49714993586 57.593 2 -0.024881549277760647 0.013351865891668773 0.9438714419765777 ['nc|ENSG00000149657|Q9BX40-2|LSM14B', 'ENSG00000149657|ENST00000279068|LSM14B'] 38840 11929 HIGDAVVI True PC9_epitope_Rep2 822.4599528515 822.45884993586 51.207 2 -0.024896682189922636 0.013351865891668773 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 74173 5908 NHYQKQLEI True PC9_epitope_Rep6 1171.5985715826298 1171.59746993586 30.993 2 -0.0249232301014245 0.013351865891668773 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 106772 17995 SYFSGSHMF True PC9_epitope_Rep5 1061.4276667470501 1061.42656993586 74.234 2 -0.02494452849440585 0.013351865891668773 0.9438714419765777 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159680387-159681146:-|nuORF'] 26443 22138 FIMEGGAMVL True PC9_epitope_Rep5 1066.5191246037398 1066.51802993586 90.189 2 -0.024953539806643922 0.013351865891668773 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 96599 7602 SELVSNGV True H1975_Epitope_Rep3 803.40249754503 803.40140993586 34.222 2 -0.02495552374701522 0.013351865891668773 0.9438714419765777 ['nc|ENSG00000186522|Q9P0V9-3|SEPTIN10', 'ENSG00000186522|ENST00000397712|SEPTIN10', 'nc|ENSG00000186522|Q9P0V9-2|SEPTIN10', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138758|ENST00000264893|SEPTIN11', 'nc|ENSG00000138758|Q9NVA2-2|SEPTIN11', 'ENST00000506047.1_1_4:77936059-77941836:+|nuORF', 'ENST00000517342.1_1_8:57389817-57390279:-|nuORF', 'nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 91669 12397 RPGEITGYMA True PC9_epitope_Rep5 1093.52262976105 1093.5215299358601 52.682 2 -0.024976115983715796 0.013351865891668773 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 57427 7553 LEIKPPPSA True H1975_Epitope_Rep2 950.54368247546 950.54258993586 34.006 2 -0.02500289188582828 0.013351865891668773 0.9438714419765777 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant', 'SRCAP|p.N716Ifs*24|1|0.21|ENSG00000080603|chr16:30713222-30713244|CAATGCCTTTCATGTGTGTATCA/-|frameshift_variant'] 52972 22610 KRNYRFFYMFI True PC9_epitope_Rep5 1583.8071248802296 1583.8054649037902 91.966 3 -0.025024831299174887 0.013351865891668773 0.9438714419765777 ['ENST00000523468.5_1_6:157963626-158049550:+|nuORF', 'nc|ENSG00000175048|Q8IZN3-2|ZDHHC14', 'ENSG00000175048|ENST00000359775|ZDHHC14'] 30009 19292 FYHKYFNYL True PC9_epitope_Rep1 1293.61824439805 1293.6166049037902 79.011 3 -0.025028008084134967 0.013351865891668773 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 79858 20061 PIIGSLFL True H1975_Epitope_Rep1 858.5214904789 858.5209449679301 83.479 1 -0.025034912518391503 0.013351865891668773 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'ENSG00000108784|ENST00000225927|NAGLU'] 25269 6120 FEDNQDVSA True H1975_Epitope_Rep2 1023.4145187807098 1023.4134299358601 28.519 2 -0.02506081622932837 0.013351865891668773 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 98827 11721 SITSELHAV True PC9_epitope_Rep6 955.4974605590301 955.49636993586 56.231 2 -0.02507026696919324 0.013351865891668773 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 106080 18855 SVMETFLLY True NCI_RA007_Epitope_Rep3 1101.5416338701298 1101.5405299358601 82.45 2 -0.025080995973950342 0.013351865891668773 0.9438714419765777 ['MAP3K6|p.D642*|1|0.14|ENSG00000142733|chr1:27360835-27360836|-/A|frameshift_variant', 'nc|ENSG00000142733|O95382-3|MAP3K6', 'ENSG00000142733|ENST00000357582|MAP3K6', 'nc|ENSG00000142733|O95382-2|MAP3K6'] 28043 16706 FRDAFTQEL True PC9_epitope_Rep2 1125.54547338061 1125.54436993586 69.508 2 -0.0251137444035307 0.013351865891668773 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 40339 12681 HRTDLNPIL True PC9_epitope_Rep1 1077.59309227937 1077.59198993586 53.649 2 -0.025119479799472377 0.013351865891668773 0.9438714419765777 ['ENST00000498316.3_1_7:28857752-28858893:+|nuORF', 'nc|ENSG00000146592|Q02930-4|CREB5', 'nc|ENSG00000146592|Q02930-3|CREB5', 'nc|ENSG00000146592|Q02930-2|CREB5', 'ENSG00000146592|ENST00000357727|CREB5'] 123316 8950 VHSTNVLL True PC9_epitope_Rep4 881.49706663621 881.49596993586 41.97 2 -0.025130236789459557 0.013351865891668773 0.9438714419765777 ['BACH1|p.I569Sfs*11|1|0.53|ENSG00000156273|chr21:29329623-29329624|TT/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 112840 17672 TPMPPISSV True PC9_epitope_Rep5 927.47355431031 927.47244993586 72.989 2 -0.02514423623689312 0.013351865891668773 0.9438714419765777 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 9939 9837 AYQKLSQLI True NCI_RA007_Epitope_Rep4 1062.6073453611798 1062.6062499358602 44.685 2 -0.025164461819030374 0.013351865891668773 0.9438714419765777 ['ENSG00000155530|ENST00000285928|LRGUK', 'LRGUK|p.P728Lfs*13|1|0.31|ENSG00000155530|chr7:134249061-134249064|CATA/-|frameshift_variant'] 15357 19020 EALFQPSFL True NCI_RA007_Epitope_Rep2 1050.53859709502 1050.53807496793 78.834 1 -0.02522592832596277 0.013351865891668773 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 28307 15521 FRYPTTEEL True PC9_epitope_Rep2 1154.5607890915799 1154.5596899358602 64.976 2 -0.02524323553184051 0.013351865891668773 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 47795 20387 IYQTWLKNL True PC9_epitope_Rep1 1177.64954452633 1177.64844993586 83.241 2 -0.025246734302094936 0.013351865891668773 0.9438714419765777 ['ENST00000507606.2_1_7:135347283-135358947:+|nuORF'] 38880 16613 HIIENIVAV True PC9_epitope_Rep4 1006.58113061334 1006.58057496793 71.873 1 -0.025256439690873603 0.013351865891668773 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 87822 20054 QVIPQFQTV True PC9_epitope_Rep5 1058.5760452328998 1058.57547496793 82.191 1 -0.025256972517856746 0.013351865891668773 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 138064 5391 YQDTHPERL True PC9_epitope_Rep1 1157.5465360097699 1157.54488490379 25.571 3 -0.025257804294843155 0.013351865891668773 0.9438714419765777 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220370207-220370552:+|nuORF'] 61864 21710 LLLENSGIL True PC9_epitope_Rep1 970.5698972232999 970.56880993586 88.34 2 -0.02527436715177152 0.013369546909213407 0.9438714419765777 ['ENSG00000172244|ENST00000306862|C5orf34'] 111331 24110 TLIEDILGV True PC9_epitope_Rep1 971.5539128059899 971.55280993586 97.553 2 -0.025282810416264345 0.013369546909213407 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 56985 7916 LEEDHACIP True H1975_Epitope_Rep2 1025.4487961144498 1025.4476899358601 35.398 2 -0.025299060941232545 0.013369546909213407 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 67767 11806 LTGVEVEY True H1975_Epitope_Rep1 908.4491133842798 908.4485649679301 50.406 1 -0.025299612047192534 0.013369546909213407 0.9438714419765777 ['CON__Q0V8M9'] 2106 2750 AELPSRAP True H1975_Epitope_Rep2 839.45011644379 839.44900993586 14.606 2 -0.02532852616607928 0.013369546909213407 0.9438714419765777 ['ENST00000403892.7_1_22:37414793-37415237:-|nuORF'] 5631 8012 APAEPGWKA True PC9_epitope_Rep5 925.4657665079299 925.46466993586 35.756 2 -0.025377909747630767 0.013369546909213407 0.9438714419765777 ['nc|ENSG00000091732|Q86WB0-3|ZC3HC1', 'nc|ENSG00000091732|Q86WB0-2|ZC3HC1', 'ENSG00000091732|ENST00000358303|ZC3HC1'] 8341 8909 ATLQYIVGR True NCI_RA007_Epitope_Rep3 1019.5763795860698 1019.57528993586 42.128 2 -0.025398963669901426 0.013369546909213407 0.9438714419765777 ['ENSG00000085377|ENST00000652536|PREP'] 126956 9209 VPVQPGSSV True PC9_epitope_Rep1 868.4654321547599 868.46432993586 40.272 2 -0.025403333400277877 0.013369546909213407 0.9438714419765777 ['nc|ENSG00000149476|Q3LXA3-2|TKFC', 'ENSG00000149476|ENST00000394900|TKFC', 'ENST00000524953.1_1_11:61110045-61110363:+|nuORF'] 74112 12762 NHVTPPNVSL True PC9_epitope_Rep1 1076.56145779792 1076.56087496793 53.963 1 -0.025421805038524842 0.013369546909213407 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 84968 17629 QIDGTLSTI True PC9_epitope_Rep5 946.49712620586 946.4965749679301 72.821 1 -0.025431280676963455 0.013369546909213407 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 113117 11740 TQAPGNPVL True PC9_epitope_Rep2 895.4763311916299 895.4752299358599 50.492 2 -0.025438220766783756 0.013369546909213407 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 114265 16231 TSAESFVNV True PC9_epitope_Rep4 952.45017601344 952.44962496793 70.374 1 -0.02554443730046421 0.013369546909213407 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 83449 20076 QDCSLYLLF True PC9_epitope_Rep5 1100.52123277872 1100.52012993586 82.275 2 -0.025556692013193282 0.013384683376475788 0.9438714419765777 ['ENST00000552189.5_1_12:48437042-48437348:-|nuORF'] 102459 10266 SPYHNFDSV True PC9_epitope_Rep2 1064.45632402304 1064.4552299358602 44.821 2 -0.025566665719268234 0.013384683376475788 0.9438714419765777 ['nc|ENSG00000139350|Q8NHV4-2|NEDD1', 'ENSG00000139350|ENST00000266742|NEDD1', 'nc|ENSG00000139350|Q8NHV4-3|NEDD1', 'NEDD1|p.I571Nfs*8|1|0.31|ENSG00000139350|chr12:96945743-96945744|-/A|frameshift_variant'] 105007 3287 STIGPEGVHQK True NCI_RA007_Epitope_Rep3 1151.5934862021898 1151.5918349037902 18.351 3 -0.0255721891403818 0.013384683376475788 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 4842 23808 ALFGALFLA True PC9_epitope_Rep2 921.5323895157699 921.53184496793 97.047 1 -0.02557711817730052 0.013384683376475788 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 36058 16007 GVDVTLPRV True PC9_epitope_Rep4 954.5498304850599 954.54872993586 69.504 2 -0.025609397284803638 0.013384683376475788 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 113715 10369 TRDETNYGIP True PC9_epitope_Rep4 1164.5411162761598 1164.54000993586 47.583 2 -0.025630541056591967 0.013384683376475788 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 8314 15796 ATLNIIHSV True PC9_epitope_Rep1 966.5498304850599 966.54872993586 65.572 2 -0.0256744633638735 0.013384683376475788 0.9438714419765777 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 84852 8052 QHQEHFIQM True PC9_epitope_Rep4 1196.5396768075198 1196.53804490379 38.422 3 -0.025678417006603595 0.013384683376475788 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 28919 20490 FTEGELMSV True PC9_epitope_Rep1 1011.4582981689899 1011.45777496793 83.629 1 -0.02569692965058796 0.013384683376475788 0.9438714419765777 ['STK11|p.P281Rfs*6|1|0.82|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENSG00000118046|ENST00000326873|STK11', 'STK11|p.M51Ifs*112|1|0.39|ENSG00000118046|chr19:1207065-1207066|-/C|frameshift_variant'] 34518 6587 GQEDHYNNL True PC9_epitope_Rep1 1088.45230127176 1088.4517749679299 30.142 1 -0.025698416165786716 0.013384683376475788 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000557173.1_1_12:95228580-95228931:+|nuORF'] 136164 16788 YGIENEVFL True H1975_Epitope_Rep1 1082.52842633414 1082.5278749679298 69.976 1 -0.025700797501818754 0.013384683376475788 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 1648 6718 AEGAYQVAA True H1975_Epitope_Rep2 878.4133965818999 878.41228993586 30.754 2 -0.02571164744778893 0.013384683376475788 0.9438714419765777 ['ENSG00000166188|ENST00000299237|ZNF319'] 8810 20039 AVFPDDMPTL True PC9_epitope_Rep6 1104.51614739828 1104.5150499358601 89.747 2 -0.025727372577869174 0.013384683376475788 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 17610 7108 EHMGNVVEA True PC9_epitope_Rep5 984.4334804034798 984.43238993586 32.309 2 -0.02574241041783591 0.013384683376475788 0.9438714419765777 ['ENSG00000242028|ENST00000442995|HYPK', 'ENST00000458412.1_2_15:44093902-44094001:+|nuORF'] 7089 8734 AQYDRQIRL True PC9_epitope_Rep2 1161.6254550368099 1161.62380490379 38.956 3 -0.025755334999936555 0.013384683376475788 0.9438714419765777 ['ENST00000600753.1_1_19:47634148-47653459:+|nuORF', 'nc|ENSG00000142230|Q9UBE0-2|SAE1', 'nc|ENSG00000142230|Q9UBE0-3|SAE1', 'ENSG00000142230|ENST00000270225|SAE1'] 76945 14735 NVPDSFNEV True PC9_epitope_Rep6 1019.45598966987 1019.45488993586 68.627 2 -0.025785948723108364 0.013384683376475788 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 39615 9097 HPLLGVSA True PC9_epitope_Rep6 792.4493881678001 792.44828993586 45.074 2 -0.025787806184906337 0.013384683376475788 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 136758 20016 YIPTELDQV True PC9_epitope_Rep1 1076.53899101784 1076.53847496793 81.817 1 -0.02581480614225061 0.013384683376475788 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 109980 14369 THSNTIVVSL True PC9_epitope_Rep1 1069.57677350889 1069.57566993586 60.095 2 -0.025857609415007643 0.013384683376475788 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 111666 22300 TLPDLVPQL True PC9_epitope_Rep1 994.5698972232999 994.5693449679301 90.588 1 -0.025862482784111556 0.013384683376475788 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 1028 11605 AEAFVSQIA True H1975_Epitope_Rep3 934.47599683846 934.47488993586 49.771 2 -0.025865876132727193 0.013384683376475788 0.9438714419765777 ['ENSG00000128654|ENST00000249442|MTX2'] 71527 12530 MKTILSNQTVD True PC9_epitope_Rep3 1248.63838778928 1248.63728993586 53.221 2 -0.025893182614929053 0.013403189832933551 0.9438714419765777 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000514842.5_1_4:39459094-39460113:-|nuORF'] 2760 5963 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep2 863.3694835450299 863.36838993586 27.918 2 -0.025898847099006396 0.013403189832933551 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 37800 5780 HCWEVMLP True H1975_Epitope_Rep2 1013.4462940166499 1013.44518993586 27.227 2 -0.025935149363260725 0.013403189832933551 0.9438714419765777 ['ENST00000373242.6_1_10:71911919-71912228:-|nuORF'] 1582 6258 AEFGQAESA True H1975_Epitope_Rep2 908.3875757568799 908.38646993586 29.026 2 -0.025952936191388866 0.013403189832933551 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'ENST00000470396.1_1_1:151238797-151239150:+|nuORF', 'ENST00000427779.5_2_1:151238655-151239816:+|nuORF'] 51856 9127 KKLPPLPSL True NCI_RA007_Epitope_Rep5 991.64300259391 991.64190993586 41.757 2 -0.025961612881326906 0.013403189832933551 0.9438714419765777 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 132467 23644 VYPALTFIL True PC9_epitope_Rep2 1035.60046907559 1035.59936993586 96.418 2 -0.025968930203783314 0.013403189832933551 0.9438714419765777 ['SLC44A5|p.H538Tfs*18|1|0.16|ENSG00000137968|chr1:75217878-75217878|G/-|frameshift_variant', 'nc|ENSG00000137968|Q8NCS7-5|SLC44A5', 'ENSG00000137968|ENST00000370859|SLC44A5', 'nc|ENSG00000137968|Q8NCS7|SLC44A5'] 53688 14651 KYAMMFAEL True NCI_RA007_Epitope_Rep5 1102.51912460374 1102.51802993586 63.023 2 -0.02599294928710118 0.013403189832933551 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 37252 15083 GVVGEVTQV True PC9_epitope_Rep1 886.47599683846 886.47544496793 62.835 1 -0.02599778383777735 0.013403189832933551 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 36653 21801 GVLPQLSMV True PC9_epitope_Rep5 942.5208388559 942.51974993586 88.889 2 -0.02602582473276904 0.013403189832933551 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 46772 14307 IVCDVPSASA True PC9_epitope_Rep5 960.45863252216 960.45752993586 60.035 2 -0.026036070515795724 0.013423383618422437 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 55480 14107 LAVHPSGVAL True PC9_epitope_Rep3 962.5549158654999 962.55380993586 59.348 2 -0.026036200629051893 0.013423383618422437 0.9438714419765777 ['ENSG00000187608|ENST00000649529|ISG15'] 39745 18915 HPYLFPVA True PC9_epitope_Rep5 942.4963383602199 942.49524993586 77.777 2 -0.026057891773718454 0.013423383618422437 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 107740 15407 TALREKLL True PC9_epitope_Rep6 942.5862159937799 942.58510993586 71.418 2 -0.02610515579774381 0.013442160843132718 0.9438714419765777 ['ENSG00000163060|ENST00000295201|TEKT4', 'TEKT4|p.A386E|1|0.18|ENSG00000163060|chr2:94876618-94876618|C/A|missense_variant'] 66737 22198 LSTRLTLLL True PC9_epitope_Rep1 1028.65938093404 1028.65828993586 90.204 2 -0.02611209607414249 0.013442160843132718 0.9438714419765777 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 18237 20641 EISAHLSALVL True PC9_epitope_Rep5 1151.65502382959 1151.65392993586 84.448 2 -0.02611532406353446 0.013442160843132718 0.9438714419765777 ['ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 24107 21237 EYSIVIQQL True PC9_epitope_Rep3 1091.58627556343 1091.5851699358602 86.979 2 -0.026144235952933154 0.013442160843132718 0.9438714419765777 ['nc|ENSG00000244038|P39656-2|DDOST', 'nc|ENSG00000244038|P39656-3|DDOST', 'ENSG00000244038|ENST00000602624|DDOST', 'nc|ENSG00000244038|P39656|DDOST'] 132047 21270 VYIDQTMVL True PC9_epitope_Rep3 1080.5525329069999 1080.5514299358601 87.108 2 -0.026155544589983617 0.013442160843132718 0.9438714419765777 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'nc|ENSG00000114650|Q12770-4|SCAP', 'nc|ENSG00000114650|Q12770-2|SCAP'] 120418 18169 VFTEVANLF True NCI_RA007_Epitope_Rep5 1038.53859709502 1038.53750993586 76.693 2 -0.026166645301659783 0.013442160843132718 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 123169 10493 VHGPPVQL True PC9_epitope_Rep2 845.47593726881 845.47484993586 45.684 2 -0.026172419249320986 0.013442160843132718 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 101846 6399 SPKAALRYAA True PC9_epitope_Rep5 1046.58727862294 1046.5861899358601 29.59 2 -0.026193609598191447 0.013442160843132718 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 126037 12891 VPAPSPLSA True PC9_epitope_Rep2 837.45961849833 837.45852993586 54.882 2 -0.026250932374850267 0.013461498012325684 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 33228 10426 GLAEAVLEA True H1975_Epitope_Rep3 871.4650978015899 871.46454496793 45.163 1 -0.02625406248939985 0.013461498012325684 0.9438714419765777 ['nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP'] 136739 15190 YINGGELFY True H1975_Epitope_Rep2 1074.5022115862998 1074.5016749679298 63.585 1 -0.026270023306463938 0.013461498012325684 0.9438714419765777 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF'] 69655 11112 LVVSTQTALA True NCI_RA007_Epitope_Rep2 1001.5757108797299 1001.5746099358599 47.803 2 -0.02630618247309973 0.013461498012325684 0.9438714419765777 ['CON__P02769'] 139875 14129 YVDPVNKVL True PC9_epitope_Rep4 1045.58079626017 1045.5796899358602 62.251 2 -0.026311205439655844 0.013461498012325684 0.9438714419765777 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 74892 10011 NLQTVNVDEN True PC9_epitope_Rep4 1144.53603089572 1144.5349299358602 46.17 2 -0.02631516646029867 0.013461498012325684 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 132425 10540 VYNPHSDTW True PC9_epitope_Rep5 1117.48287312405 1117.48176993586 45.532 2 -0.026350454148757495 0.013479979811574698 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'IPP|p.E557K|1|0.35|ENSG00000197429|chr1:45700052-45700052|C/T|missense_variant'] 27097 14344 FLQDYFDGNLK True NCI_RA007_Epitope_Rep1 1358.65066672514 1358.6495699358602 59.833 2 -0.026352278401982655 0.013479979811574698 0.9438714419765777 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000434494.5_1_15:44038867-44063413:+|nuORF', 'ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 47617 21114 IYPDSFTVL True PC9_epitope_Rep4 1053.53826274185 1053.5371699358602 89.377 2 -0.026378184013026745 0.013479979811574698 0.9438714419765777 ['RWDD1-FAM26D|1|fusion', 'ENSG00000111832|ENST00000466444|RWDD1'] 27706 8466 FQDNHGVTV True PC9_epitope_Rep3 1015.4723084403499 1015.47120993586 37.527 2 -0.02640368763201911 0.013479979811574698 0.9438714419765777 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2'] 135948 10735 YEYGIFNQK True NCI_RA007_Epitope_Rep1 1160.55022440788 1160.54912993586 45.749 2 -0.02642240097100417 0.013479979811574698 0.9438714419765777 ['nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 38519 3951 HHDNTYTV True PC9_epitope_Rep5 985.42535824793 985.42426993586 20.278 2 -0.0264236850329248 0.013479979811574698 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 102650 16422 SQDFPGSNL True PC9_epitope_Rep5 963.42977492203 963.42922496793 68.168 1 -0.026436746418088682 0.013479979811574698 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 75136 13872 NNALGDLVLY True H1975_Epitope_Rep2 1090.56587447202 1090.56476993586 58.503 2 -0.02645465625338762 0.013479979811574698 0.9438714419765777 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.A1065Pfs*28|1|0.5|ENSG00000105429|chr19:42352298-42352298|T/-|frameshift_variant'] 58886 10849 LFTELCHPP True H1975_Epitope_Rep2 1055.5110024481899 1055.5099099358602 46.76 2 -0.026462467964802665 0.013479979811574698 0.9438714419765777 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant', 'ENST00000426414.6_1_4:85730999-85781744:-|nuORF', 'ENST00000504990.1_1_4:85771028-85781672:-|nuORF', 'WDFY3|p.H165Pfs*4|1|0.14|ENSG00000163625|chr4:84837011-84837012|-/G|frameshift_variant'] 136170 21051 YGIENEVFL True PC9_epitope_Rep4 1082.52842633414 1082.52732993586 89.133 2 -0.026476706921130726 0.013499306110433576 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 87898 8948 QVM[Oxidation]QGMGVSA True PC9_epitope_Rep5 1022.4525019763398 1022.4514099358599 39.361 2 -0.026485108216903176 0.013499306110433576 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 120429 18851 VFTNSSWLW True NCI_RA007_Epitope_Rep4 1138.54474510462 1138.54364993586 81.535 2 -0.02650240250849981 0.013499306110433576 0.9438714419765777 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 137772 22158 YNTLLPYTF True PC9_epitope_Rep5 1130.56481184286 1130.56370993586 90.268 2 -0.026534854781996357 0.013499306110433576 0.9438714419765777 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant'] 66633 10521 LSSQVGLTSV True PC9_epitope_Rep1 989.5393253710099 989.53822993586 45.36 2 -0.02656207994228235 0.013499306110433576 0.9438714419765777 ['nc|ENSG00000054523|O60333-3|KIF1B', 'nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 8020 11594 ATDPVTGDLY True H1975_Epitope_Rep3 1050.48695544498 1050.48637496793 49.727 1 -0.026572159564734847 0.013499306110433576 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 26123 13058 FHGISPGL True PC9_epitope_Rep2 826.43373810366 826.43264993586 55.507 2 -0.026594665786983603 0.013518911759140509 0.9438714419765777 ['ENSG00000174282|ENST00000380599|ZBTB4'] 107794 8511 TANRAAELL True PC9_epitope_Rep2 957.5243440132099 957.52324993586 38.101 2 -0.02664255264283905 0.013518911759140509 0.9438714419765777 ['ORC1|p.H596R|1|0.13|ENSG00000085840|chr1:52383906-52383906|T/C|missense_variant'] 75331 8511 NPYYGGESA True PC9_epitope_Rep2 956.3875757568799 956.38646993586 38.101 2 -0.026645371056065795 0.013518911759140509 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 90739 8754 RKQMVIDVL True NCI_RA007_Epitope_Rep3 1100.6375999436398 1100.6365099358602 41.524 2 -0.026654496145817035 0.013518911759140509 0.9438714419765777 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000473603.1_1_11:33258589-33258820:+|nuORF'] 89109 4586 REFEERHIP True H1975_Epitope_Rep2 1211.6047195922297 1211.60308490379 22.744 3 -0.026676861103695236 0.013518911759140509 0.9438714419765777 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 44683 17854 IPMRDFVCA True PC9_epitope_Rep1 1050.4990578655 1050.49796993586 73.47 2 -0.026696049654869262 0.013537944082404878 0.9438714419765777 ['ENSG00000178896|ENST00000316052|EXOSC4'] 6651 10879 AQAEVYKEL True PC9_epitope_Rep3 1049.53932537101 1049.53822993586 46.827 2 -0.0267376719160989 0.013537944082404878 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 24597 19712 FAMPYFIQV True NCI_RA007_Epitope_Rep4 1114.55213898418 1114.5510499358602 85.187 2 -0.026742024126415853 0.013537944082404878 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|19|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 37141 17195 GVTEVLHGL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 71.399 2 -0.026762062105612137 0.013537944082404878 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1'] 47450 21539 IYIPSYFDF True PC9_epitope_Rep6 1163.55391280599 1163.55280993586 95.724 2 -0.026794503270549577 0.013537944082404878 0.9438714419765777 ['ENSG00000117597|ENST00000491415|UTP25', 'ENST00000457820.1_2_1:210016778-210017042:+|nuORF'] 131514 18170 VVVEYLRAV True PC9_epitope_Rep5 1046.6124307416198 1046.61132993586 74.901 2 -0.02683070612472882 0.013537944082404878 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3', 'ENST00000515601.6_1_5:465213-467010:+|nuORF', 'ENST00000505947.1_1_5:465213-465961:+|nuORF'] 56897 9439 LEDPSQLPP True H1975_Epitope_Rep1 994.49712620586 994.49602993586 41.222 2 -0.026861110766828827 0.013537944082404878 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000466995.5_1_X:48751014-48751375:-|nuORF'] 132385 19313 VYNAVLELF True NCI_RA007_Epitope_Rep3 1066.5698972233 1066.5688099358601 84.317 2 -0.026902491840748232 0.013574280310989704 0.9438714419765777 ['nc|ENSG00000134242|Q9Y2R2-6|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-2|PTPN22', 'ENST00000484147.5_1_1:114375712-114414257:-|nuORF', 'nc|ENSG00000134242|Q9Y2R2-4|PTPN22', 'nc|ENSG00000134242|Q9Y2R2|PTPN22', 'ENSG00000134242|ENST00000359785|PTPN22'] 62144 21541 LLPEHFLFL True PC9_epitope_Rep4 1127.63791721347 1127.63682993586 91.036 2 -0.026902546642717406 0.013574280310989704 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 53620 4566 KWDWRSWRESR True NCI_RA007_Epitope_Rep2 1590.7803925384198 1590.7787549037903 22.39 3 -0.026917893146946377 0.013574280310989704 0.9438714419765777 ['ENST00000340124.8_1_16:46964176-46964458:+|nuORF'] 127633 13163 VRDPRVLIL True PC9_epitope_Rep6 1079.68151336095 1079.68040993586 62.275 2 -0.02692443979798013 0.013574280310989704 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 45112 13531 IQTAVRLLL True NCI_RA007_Epitope_Rep4 1025.6597152872098 1025.65860993586 59.255 2 -0.026941739686344803 0.013574280310989704 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC4|p.R93G|1|0.26|ENSG00000278588|chr6:26123628-26123628|T/C|missense_variant', 'H2BC4|p.E94D|1|0.3|ENSG00000278588|chr6:26123623-26123623|C/A|missense_variant', 'H2BC7|p.E94D|1|0.38|ENSG00000277224|chr6:26199840-26199840|G/C|missense_variant', 'H2BC21|p.P104L|1|0.5|ENSG00000184678|chr1:149886330-149886330|G/A|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENSG00000146047|ENST00000274764|H2BC1'] 106942 11216 SYLDKVQAL True H1975_Epitope_Rep2 1035.5600608155898 1035.5589699358602 48.183 2 -0.026948440107211983 0.013574280310989704 0.9438714419765777 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 70366 19761 LYQDGVFKF True PC9_epitope_Rep2 1115.56514619603 1115.56404993586 81.399 2 -0.026951060100706064 0.013574280310989704 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 6377 7737 APRQPGLMA True PC9_epitope_Rep5 939.4960210903898 939.49547496793 34.702 1 -0.026963570026522242 0.013574280310989704 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 60541 19782 LIPPSLQGV True PC9_epitope_Rep2 922.5487678558999 922.54766993586 81.479 2 -0.026971253860837072 0.013574280310989704 0.9438714419765777 ['ENSG00000177666|ENST00000336615|PNPLA2', 'ENST00000525250.5_1_11:821680-823850:+|nuORF'] 44036 21530 ILLAEVPTM True PC9_epitope_Rep2 985.55180463101 985.55070993586 88.283 2 -0.02698186223679921 0.013574280310989704 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF'] 17154 11540 EGYADKNLIA True PC9_epitope_Rep1 1092.54513902744 1092.5440499358601 49.267 2 -0.02698192203498255 0.013574280310989704 0.9438714419765777 ['ENSG00000106245|ENST00000222969|BUD31', 'nc|ENSG00000106245|P41223-2|BUD31', 'ENST00000466798.1_1_7:99013792-99015269:+|nuORF'] 8465 18280 ATSVTFVGV True PC9_epitope_Rep4 879.4701831820299 879.46963496793 78.384 1 -0.026982864592950823 0.013574280310989704 0.9438714419765777 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF'] 96582 9102 SELRSVLV True H1975_Epitope_Rep3 901.5232813840499 901.52218993586 39.999 2 -0.027029222498975703 0.013574280310989704 0.9438714419765777 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'PKMYT1|p.F483Lfs*14|1|0.54|ENSG00000127564|chr16:2973004-2973004|A/-|frameshift_variant', 'ENSG00000127564|ENST00000262300|PKMYT1', 'ENST00000575981.1_1_16:3022956-3024767:-|nuORF'] 102495 7597 SPYIPPHAA True PC9_epitope_Rep4 951.48141657207 951.48030993586 36.604 2 -0.02704201127674096 0.013574280310989704 0.9438714419765777 ['nc|ENSG00000105701|Q14318|FKBP8', 'ENSG00000105701|ENST00000608443|FKBP8', 'ENST00000596494.1_1_19:18648927-18650245:-|nuORF'] 28047 16074 FRDAFTQEL True PC9_epitope_Rep4 1125.54547338061 1125.54436993586 69.763 2 -0.027049244582700863 0.013574280310989704 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 113428 19407 TQNDIISTL True PC9_epitope_Rep2 1003.51858992643 1003.51807496793 80.027 1 -0.02706336122049458 0.013574280310989704 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 69634 17010 LVVDWDHHL True PC9_epitope_Rep1 1132.56654317836 1132.56490490379 70.251 3 -0.02708720242891278 0.013574280310989704 0.9438714419765777 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 63289 6289 LPASNLAGKEA True PC9_epitope_Rep6 1069.57677350889 1069.57566993586 32.705 2 -0.027093617750668302 0.013574280310989704 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1'] 5656 9575 APAKSLVGQVA True PC9_epitope_Rep3 1039.6025943339098 1039.6014899358602 41.781 2 -0.027097627757285282 0.013574280310989704 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 113682 17601 TRDELPYTF True PC9_epitope_Rep2 1140.54513902744 1140.5440499358601 72.98 2 -0.0271027988798407 0.013574280310989704 0.9438714419765777 ['nc|ENSG00000087269|P78316-2|NOP14', 'ENSG00000087269|ENST00000416614|NOP14'] 58450 16336 LEWPSLTA True H1975_Epitope_Rep2 915.4701831820299 915.46963496793 68.055 1 -0.027168081404427436 0.013593293694980775 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 3904 15120 AHDDSVMYL True PC9_epitope_Rep1 1049.44879611445 1049.4476899358601 62.978 2 -0.027170538526956847 0.013593293694980775 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 72512 17729 MVDESGLWAVY True H1975_Epitope_Rep2 1268.5747249035599 1268.57362993586 73.516 2 -0.02723379222221929 0.013593293694980775 0.9438714419765777 ['ENSG00000105088|ENST00000264833|OLFM2', 'nc|ENSG00000130558|Q99784-3|OLFM1', 'nc|ENSG00000130558|Q99784-5|OLFM1', 'ENSG00000130558|ENST00000371793|OLFM1'] 87663 5463 QVASTLKQV True PC9_epitope_Rep6 972.5603951687598 972.55928993586 28.952 2 -0.027247782985652197 0.013593293694980775 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 9384 14645 AVVESMVTA True PC9_epitope_Rep1 905.4528188657299 905.4522749679301 61.154 1 -0.027250880518460623 0.013593293694980775 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 130153 5895 VTRQDYTY True PC9_epitope_Rep2 1044.4876241513198 1044.48652993586 28.069 2 -0.027269079256260393 0.013593293694980775 0.9438714419765777 ['ENSG00000005059|ENST00000394650|MCUB', 'MCUB|p.I268T|1|0.11|ENSG00000005059|chr4:109684633-109684633|T/C|missense_variant'] 123524 16587 VIIDDHPEVTV True PC9_epitope_Rep1 1235.63976768827 1235.6386699358602 68.627 2 -0.027328885926537053 0.013593293694980775 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 102600 15177 SQAPEAWRL True PC9_epitope_Rep5 1056.53524305008 1056.5341499358601 63.386 2 -0.027350246441426498 0.013613159387407828 0.9438714419765777 ['ENSG00000168936|ENST00000382936|TMEM129', 'nc|ENSG00000168936|A0AVI4-2|TMEM129'] 34772 21387 GQSELTLLL True PC9_epitope_Rep4 972.54916177872 972.54861496793 90.433 1 -0.027351655637302803 0.013613159387407828 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 5901 10549 APGYSYTAA True PC9_epitope_Rep1 899.4024975450299 899.40140993586 45.467 2 -0.027372954579382724 0.013613159387407828 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS'] 31561 9034 GEFRQGLISA True NCI_RA007_Epitope_Rep4 1076.56145779792 1076.56036993586 41.582 2 -0.027425871281231962 0.013613159387407828 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ENST00000567008.1_1_16:2048235-2049192:-|nuORF'] 107361 12269 SYSGTFHSL True PC9_epitope_Rep5 997.4505103666099 997.44940993586 52.181 2 -0.027447779001514436 0.013631590002100399 0.9438714419765777 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1'] 35583 12238 GTITDDVRV True PC9_epitope_Rep1 974.50327421546 974.50216993586 51.933 2 -0.027461760226303766 0.013631590002100399 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 105325 8643 [Acetylation]-STVHEILC[Carbamidomethyl]K True H1975_Epitope_Rep1 1127.56449516876 1127.5633899358602 38.174 2 -0.02750544456124988 0.013631590002100399 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 25634 6886 FEVTKTAVA True H1975_Epitope_Rep3 964.5229470308799 964.52184993586 31.447 2 -0.027556145050879676 0.013631590002100399 0.9438714419765777 ['ENSG00000074842|ENST00000262947|MYDGF'] 31320 11519 GEAEAFAIGA True NCI_RA007_Epitope_Rep3 934.4396113297398 934.4390649679301 52.431 1 -0.02756859017118055 0.013631590002100399 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 36849 14759 GVPTKVFNV True PC9_epitope_Rep5 959.5440168286299 959.54290993586 61.77 2 -0.02757408850857859 0.013631590002100399 0.9438714419765777 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3'] 83001 5557 PYHPHPHVF True NCI_RA007_Epitope_Rep4 1129.54574816413 1129.5441149037902 27.975 3 -0.02757963829936519 0.013631590002100399 0.9438714419765777 ['ENSG00000053254|ENST00000557258|FOXN3', 'nc|ENSG00000053254|O00409|FOXN3', 'ENST00000557261.1_1_14:89816083-89817451:-|nuORF'] 58096 13166 LERSNVVI True PC9_epitope_Rep2 928.5341804209199 928.53308993586 55.916 2 -0.027622289221181515 0.013631590002100399 0.9438714419765777 ['FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 9392 17418 AVVGGVVAV True PC9_epitope_Rep2 769.4697892592098 769.4692449679301 72.257 1 -0.027622642270433883 0.013631590002100399 0.9438714419765777 ['ENSG00000165948|ENST00000555523|IFI27L1'] 74891 11052 NLQTVNVDEN True PC9_epitope_Rep3 1144.53603089572 1144.5349299358602 47.507 2 -0.02763574477563636 0.013650873655913979 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 32732 6089 GHVFEESQVAG True NCI_RA007_Epitope_Rep3 1158.53055159246 1158.5294499358602 30.935 2 -0.02764052456657338 0.013650873655913979 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 108913 5037 TESSHFYSA True H1975_Epitope_Rep1 1027.4246895415897 1027.42358993586 24.444 2 -0.02764792703142001 0.013650873655913979 0.9438714419765777 ['ENSG00000111266|ENST00000298573|DUSP16'] 29732 22524 FVPQFISQL True PC9_epitope_Rep1 1077.5858816406098 1077.58478993586 91.44 2 -0.027707284997612096 0.013650873655913979 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 131333 11636 VVRNEQVEI True PC9_epitope_Rep6 1084.58767254576 1084.58656993586 55.879 2 -0.02771398216701853 0.013650873655913979 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 116920 14506 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47054993586 60.797 2 -0.02775556500685988 0.013650873655913979 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 134997 11087 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.3808149679301 47.534 1 -0.02779411933551709 0.013669004325368496 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 102307 5971 SPVFRTGSE True PC9_epitope_Rep4 978.4770594676199 978.47596993586 29.913 2 -0.027820338960547364 0.013669004325368496 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 87741 20282 QVFENFVQA True PC9_epitope_Rep1 1080.5240096600398 1080.52290993586 82.842 2 -0.02784957230718121 0.013669004325368496 0.9438714419765777 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'ENST00000531732.5_1_11:12183702-12229694:+|nuORF', 'nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 35879 21478 GVAETLVLV True PC9_epitope_Rep1 899.5327834385898 899.53168993586 87.456 2 -0.02787598598122356 0.013669004325368496 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 57175 5256 LEERYVPRA True H1975_Epitope_Rep2 1131.6036569630699 1131.60254993586 25.284 2 -0.027898152826545043 0.013669004325368496 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 39711 12979 HPVEPVLVTA True PC9_epitope_Rep1 1060.59169529704 1060.5905899358602 54.796 2 -0.027906171645476943 0.013669004325368496 0.9438714419765777 ['nc|ENSG00000196792|Q13033-2|STRN3', 'ENSG00000196792|ENST00000357479|STRN3'] 6360 7812 APRQPGLMA True PC9_epitope_Rep1 939.4960210903898 939.49492993586 34.873 2 -0.02791150653699667 0.013669004325368496 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 88283 16767 QYGGDLTNTF True PC9_epitope_Rep6 1114.49310345458 1114.49200993586 76.987 2 -0.027914362287866666 0.013669004325368496 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 34719 13000 GQNNSVFTL True NCI_RA007_Epitope_Rep3 978.47705946762 978.47596993586 58.408 2 -0.02791859159905483 0.013669004325368496 0.9438714419765777 ['ENSG00000131475|ENST00000253794|VPS25'] 124348 19900 VLDSEGYLLFY True H1975_Epitope_Rep2 1317.6492697428098 1317.64867496793 82.529 1 -0.027942316989253358 0.013669004325368496 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 74717 14577 NLLARLCL True PC9_epitope_Rep1 914.5371576263799 914.53606993586 60.894 2 -0.027949553507658327 0.013687989419100204 0.9438714419765777 ['ENST00000374279.3_1_9:114696562-114696673:+|nuORF'] 22465 17406 ETHFGFETV True PC9_epitope_Rep3 1065.47672511445 1065.47562993586 72.121 2 -0.027956600083827342 0.013687989419100204 0.9438714419765777 ['ENSG00000110871|ENST00000288532|COQ5', 'ENST00000547736.1_1_12:120964341-120966944:-|nuORF', 'ENST00000547448.1_1_12:120965158-120966944:-|nuORF'] 123245 21075 VHNLLLTYL True PC9_epitope_Rep2 1084.62808080576 1084.6269899358601 86.522 2 -0.027957749487646566 0.013687989419100204 0.9438714419765777 ['nc|ENSG00000170540|Q15041-2|ARL6IP1', 'ENSG00000170540|ENST00000304414|ARL6IP1'] 107922 12381 TAVTVNQSL True PC9_epitope_Rep1 931.4974605590301 931.49691496793 52.482 1 -0.027960724477802876 0.013687989419100204 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 72523 18600 MVDGTLLLL True NCI_RA007_Epitope_Rep3 973.5518046310099 973.55125496793 81.379 1 -0.027965484438743703 0.013687989419100204 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 132322 17422 VYLPNINKI True PC9_epitope_Rep4 1072.62808080576 1072.6269899358601 75.007 2 -0.027970632118827696 0.013687989419100204 0.9438714419765777 ['ENSG00000072422|ENST00000337910|RHOBTB1'] 73524 8350 NFGTRDAE True NCI_RA007_Epitope_Rep1 908.3988091469199 908.39770993586 36.48 2 -0.028032885039637655 0.013687989419100204 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 99395 4807 SLEDKQQVP True H1975_Epitope_Rep3 1042.5294889633 1042.52838993586 23.619 2 -0.028091262317341742 0.013699492300591616 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A', 'ENST00000503417.1_1_5:137515369-137517456:+|nuORF'] 117674 12484 VAKGGLGLI True PC9_epitope_Rep5 826.5276384884999 826.52654993586 53.019 2 -0.028124572888457815 0.013699492300591616 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10'] 89455 7723 REQEELLAPA True H1975_Epitope_Rep2 1154.59315184902 1154.5920499358601 34.658 2 -0.02814422258104275 0.013699492300591616 0.9438714419765777 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP'] 74004 5437 NHQKDIQVL True PC9_epitope_Rep2 1093.58800689893 1093.5869099358601 26.305 2 -0.028164413156037005 0.013699492300591616 0.9438714419765777 ['ENSG00000153561|ENST00000283632|RMND5A'] 39571 15285 HPIEPVLITA True PC9_epitope_Rep4 1088.62299542532 1088.62188993586 66.723 2 -0.028183327923770134 0.013699492300591616 0.9438714419765777 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 123700 16377 VIPGMFKEV True PC9_epitope_Rep4 1018.5521389841799 1018.55104993586 70.956 2 -0.028196719244511663 0.013699492300591616 0.9438714419765777 ['ENSG00000122729|ENST00000309951|ACO1'] 8334 19713 ATLPTTLGV True PC9_epitope_Rep5 871.5014833103099 871.5009349679301 80.871 1 -0.028233797175498156 0.013699492300591616 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 16127 3680 EEEEPVKEA True H1975_Epitope_Rep1 1058.4767846840998 1058.4756899358601 18.608 2 -0.028236033939587683 0.013699492300591616 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF', 'NCL|p.E271del|1|0.14|ENSG00000115053|chr2:231460680-231460682|TCT/-|inframe_deletion'] 26095 8366 FHEGEAVSV True PC9_epitope_Rep4 973.4505103666098 973.44940993586 39.638 2 -0.02824880985663295 0.013699492300591616 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1'] 137637 22630 YLVYILNEL True PC9_epitope_Rep4 1138.6274120994199 1138.62687496793 95.275 1 -0.02829188384421855 0.013699492300591616 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 1556 11446 AEEYGGVMV True H1975_Epitope_Rep2 953.4164333570099 953.41532993586 49.08 2 -0.02832555338955999 0.013699492300591616 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF', 'ENST00000479169.5_1_2:242177863-242181895:-|nuORF'] 75330 9266 NPYYGGESA True PC9_epitope_Rep1 956.3875757568799 956.38646993586 40.494 2 -0.028336793173724017 0.013699492300591616 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 8023 7382 ATDRFRSLY True H1975_Epitope_Rep2 1127.5723568347898 1127.57071490379 33.335 3 -0.02834017125628577 0.013699492300591616 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-10|DST'] 37851 4865 HDPSAVAV True PC9_epitope_Rep4 794.3922672145001 794.39116993586 25.302 2 -0.028385059827768563 0.013699492300591616 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 70367 20077 LYQDGVFKF True PC9_epitope_Rep3 1115.56514619603 1115.56404993586 82.478 2 -0.028426626050672386 0.013699492300591616 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 101620 16393 SPFGSITSA True PC9_epitope_Rep2 865.4181476091701 865.4175949679301 68.301 1 -0.028456355047780536 0.013699492300591616 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 87897 8308 QVMQGM[Oxidation]GVSA True PC9_epitope_Rep5 1022.4525019763398 1022.4514099358599 36.895 2 -0.028457722222007483 0.013699492300591616 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 136450 16381 YHGLTVPL True PC9_epitope_Rep2 898.4912529797799 898.49014993586 68.256 2 -0.028469004505870216 0.013699492300591616 0.9438714419765777 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 88597 19433 RALLLGAL True PC9_epitope_Rep5 825.5436229058099 825.54252993586 79.799 2 -0.02848289419653121 0.013699492300591616 0.9438714419765777 ['ENST00000525095.2_1_11:134094621-134094950:+|nuORF', 'ENST00000281187.9_1_11:134094584-134094950:+|nuORF'] 1216 6693 AEDFKQQVP True H1975_Epitope_Rep2 1060.5189242796 1060.5178299358602 30.654 2 -0.028504784864804126 0.013699492300591616 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 118090 9875 VATVSLPR True PC9_epitope_Rep1 841.5021520166499 841.50104993586 42.842 2 -0.02851227047766314 0.013699492300591616 0.9438714419765777 ['CON__P00761'] 47653 10755 IYPPKLHQF True PC9_epitope_Rep4 1141.62841515893 1141.62676490379 49.126 3 -0.028535074482379207 0.013699492300591616 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 139476 17767 YTGEGQWEV True PC9_epitope_Rep5 1067.45598966987 1067.4548899358601 73.358 2 -0.02855505879532596 0.013699492300591616 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 25575 15305 FESPLTLAA True H1975_Epitope_Rep2 947.4963979298699 947.4958449679301 64.029 1 -0.02856232225443104 0.013699492300591616 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'nc|ENSG00000131503|Q8IWZ3-5|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-3|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-2|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 123257 7172 VHPPPTTTY True PC9_epitope_Rep3 1011.5025459394701 1011.50144993586 32.599 2 -0.028613713700581227 0.013699492300591616 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 113420 6986 TQLQTTQSV True PC9_epitope_Rep6 1004.5138388991599 1004.51274993586 35.846 2 -0.028616486208736733 0.013699492300591616 0.9438714419765777 ['nc|ENSG00000143569|Q14157-3|UBAP2L', 'ENSG00000143569|ENST00000428931|UBAP2L', 'nc|ENSG00000143569|Q14157-5|UBAP2L', 'nc|ENSG00000143569|Q14157-4|UBAP2L', 'nc|ENSG00000143569|Q14157-1|UBAP2L', 'UBAP2L|p.E636Q|2|0.14|ENSG00000143569|chr1:154254887-154254887|G/C|missense_variant'] 48618 5850 KEIHVNIEA True H1975_Epitope_Rep3 1051.56620882519 1051.5651099358602 27.515 2 -0.02863096279655363 0.013699492300591616 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 85411 16009 QLELTDAEL True PC9_epitope_Rep2 1030.51825557326 1030.51714993586 66.834 2 -0.028649581167556237 0.013699492300591616 0.9438714419765777 ['ENSG00000122735|ENST00000242317|DNAI1', 'nc|ENSG00000122735|Q9UI46-2|DNAI1'] 84983 10234 QIDTGENLY True H1975_Epitope_Rep2 1051.48220441771 1051.4816749679298 44.37 1 -0.02866073114141725 0.013699492300591616 0.9438714419765777 ['ENSG00000185947|ENST00000300870|ZNF267', 'ENST00000575471.2_1_16:31925765-31927799:+|nuORF'] 138212 9540 YQSKYEELQIT True NCI_RA007_Epitope_Rep5 1400.6823607762399 1400.6812699358602 43.333 2 -0.028677666118436886 0.013699492300591616 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 88556 4816 RAIEALHGHEL True NCI_RA007_Epitope_Rep3 1244.6625688215202 1244.66092490379 25.912 3 -0.02871323615057007 0.013699492300591616 0.9438714419765777 ['nc|ENSG00000239306|Q96PK6-5|RBM14', 'nc|ENSG00000239306|Q96PK6-3|RBM14', 'nc|ENSG00000239306|Q96PK6-4|RBM14', 'ENST00000511114.1_1_11:66384104-66406046:+|nuORF', 'nc|ENSG00000239306|Q96PK6-2|RBM14', 'ENST00000512283.1_1_11:66384104-66384788:+|nuORF', 'RBM14|p.D163Tfs*68|2|0.19|ENSG00000239306|chr11:66624360-66624360|G/-|frameshift_variant', 'ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 8054 14833 ATDYTFAMY True H1975_Epitope_Rep2 1081.44264810485 1081.44207496793 62.212 1 -0.02872789159911982 0.013699492300591616 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'FOXP4-CCND3|5|fusion', 'FOXP4-CCND3|1|fusion', 'FOXP4-CCND3|3|fusion', 'FOXP4-CCND3|2|fusion', 'FOXP4-CCND3|4|fusion', 'ENST00000513956.5_1_6:41904284-42016364:-|nuORF'] 70529 18452 LYTGTVSSF True PC9_epitope_Rep3 973.47566248529 973.47456993586 76.179 2 -0.028746285946646126 0.013699492300591616 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 106406 17858 SVTFVAEQV True PC9_epitope_Rep2 978.5022115862997 978.50110993586 73.993 2 -0.02878939218705412 0.013719320327249842 0.9438714419765777 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000531819.5_1_1:52237836-52249732:+|nuORF'] 5419 16665 ALVVQVAEA True PC9_epitope_Rep3 898.5123823471799 898.51128993586 69.238 2 -0.028857051319091432 0.013719320327249842 0.9438714419765777 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 102097 8762 SPPVPGPSA True PC9_epitope_Rep5 807.41266830591 807.41156993586 38.645 2 -0.02885893492095163 0.013719320327249842 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 21493 18870 ERQRWLVAL True PC9_epitope_Rep1 1169.6669259259697 1169.66527490379 77.368 3 -0.02886121721492868 0.013719320327249842 0.9438714419765777 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3', 'ENST00000498106.1_1_7:30085848-30088836:+|nuORF', 'nc|ENSG00000106086|Q96JA3-3|PLEKHA8', 'nc|ENSG00000106086|Q96JA3-2|PLEKHA8', 'ENSG00000106086|ENST00000449726|PLEKHA8'] 2245 11964 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.5118349679301 51.098 1 -0.028928258081314717 0.0137368398976553 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 34923 17086 GQWASVIRV True PC9_epitope_Rep4 1014.5610638750999 1014.55996993586 73.719 2 -0.02894819012643465 0.0137368398976553 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 5960 8395 APITGQVSA True PC9_epitope_Rep4 842.4497820906199 842.44868993586 39.753 2 -0.02896908297709484 0.0137368398976553 0.9438714419765777 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 91960 5091 RPPPPPPPP True PC9_epitope_Rep2 950.5337864980999 950.53268993586 24.96 2 -0.02898145061353077 0.0137368398976553 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 6231 4709 APRGPGTVPA True PC9_epitope_Rep3 921.5032146458099 921.50210993586 23.206 2 -0.02900575938350598 0.0137368398976553 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 60195 17392 LIAHRKFK True PC9_epitope_Rep3 1011.6341692457099 1011.63306993586 72.068 2 -0.02900893976018514 0.0137368398976553 0.9438714419765777 ['ENSG00000277149|ENST00000620995|TYW1B', 'nc|ENSG00000277149|Q6NUM6-2|TYW1B', 'ENSG00000198874|ENST00000359626|TYW1'] 70369 20056 LYQDGVFKF True PC9_epitope_Rep5 1115.56514619603 1115.56404993586 82.199 2 -0.02902643941091427 0.0137368398976553 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 44902 7357 IQDNHDGTYTV True PC9_epitope_Rep2 1261.55749461629 1261.5563899358601 33.68 2 -0.029033249651816098 0.0137368398976553 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 112672 12633 TPFTAIREA True PC9_epitope_Rep5 1004.5290950404798 1004.52798993586 53.595 2 -0.029043945174659937 0.0137368398976553 0.9438714419765777 ['nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14', 'CDK14|p.E172K|1|0.15|ENSG00000058091|chr7:90790622-90790622|G/A|missense_variant'] 68435 18550 LTTNIMEIL True NCI_RA007_Epitope_Rep4 1046.56818297114 1046.5670899358602 80.261 2 -0.029123301409045923 0.0137368398976553 0.9438714419765777 ['nc|ENSG00000171560|P02671|FGA', 'ENSG00000171560|ENST00000403106|FGA'] 126876 12246 VPTPAPISA True PC9_epitope_Rep4 851.47526856247 851.47416993586 54.921 2 -0.029126247697219877 0.0137368398976553 0.9438714419765777 ['ENSG00000198455|ENST00000374888|ZXDB', 'ENSG00000198205|ENST00000358697|ZXDA', 'ZXDA|p.L327Cfs*25|1|0.52|ENSG00000198205|chrX:57909442-57909442|G/-|frameshift_variant'] 97267 21415 SFPLDIGSV True PC9_epitope_Rep1 933.48074786573 933.47964993586 87.209 2 -0.0291313038275103 0.0137368398976553 0.9438714419765777 ['ENSG00000130052|ENST00000374599|STARD8'] 24795 10133 FC[Carbamidomethyl]GGSLINS True H1975_Epitope_Rep1 953.42766702648 953.42711496793 43.913 1 -0.029163210397563512 0.013755504298595093 0.9438714419765777 ['CON__P00761'] 102174 4702 SPRTDPYSA True PC9_epitope_Rep3 992.4563240230399 992.45522993586 23.179 2 -0.029174559004901367 0.013755504298595093 0.9438714419765777 ['ENSG00000043355|ENST00000376335|ZIC2'] 4535 6006 AKQLTTTI True NCI_RA007_Epitope_Rep3 874.51238234718 874.51128993586 30.604 2 -0.02919038399010156 0.013755504298595093 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 45104 12080 IQSGGNYNL True PC9_epitope_Rep5 964.4614094034799 964.46030993586 51.46 2 -0.029193847335542075 0.013755504298595093 0.9438714419765777 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.T612Dfs*15|1|0.34|ENSG00000092201|chr14:21361174-21361175|-/T|frameshift_variant', 'ENST00000537175.1_1_12:16554488-16554707:-|nuORF'] 13401 12825 DNKTSQPITL True PC9_epitope_Rep1 1115.58225281215 1115.5811499358601 54.206 2 -0.029214901367240195 0.013755504298595093 0.9438714419765777 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2'] 38913 10536 HILDSQTVVLK True PC9_epitope_Rep4 1251.7186867153102 1251.71704490379 48.254 3 -0.029216351150568417 0.013755504298595093 0.9438714419765777 ['nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B', 'nc|ENSG00000138182|Q96Q89-4|KIF20B'] 116157 12367 TVTETSTVL True PC9_epitope_Rep5 949.49679185269 949.49624496793 52.565 1 -0.029217972779023733 0.013755504298595093 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.N5794K|1|0.43|ENSG00000181143|chr19:8959388-8959388|G/T|missense_variant'] 42457 14958 IEQPTPFLP True H1975_Epitope_Rep1 1040.5542471591598 1040.55367496793 62.777 1 -0.029235536703252806 0.013755504298595093 0.9438714419765777 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2'] 123698 7445 VIPELNGK True PC9_epitope_Rep6 868.50181766348 868.50072993586 37.871 2 -0.029264220850032652 0.013771275257818395 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000419696.1_1_1:117256762-117256939:-|nuORF'] 114143 9407 TRSPSVCL True PC9_epitope_Rep1 861.4378375079299 861.43674993586 41.042 2 -0.029281624128376024 0.013771275257818395 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF', 'ECE1|p.V239Mfs*13|1|0.31|ENSG00000117298|chr1:21258737-21258740|AGAC/-|frameshift_variant'] 132388 14382 VYNENLVHM True PC9_epitope_Rep1 1117.52262976105 1117.5215299358601 60.144 2 -0.02930176523089899 0.013771275257818395 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 36056 16714 GVDVTLPRV True PC9_epitope_Rep2 954.5498304850599 954.54872993586 69.537 2 -0.02930251457901182 0.013771275257818395 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 86289 16667 QQDYFPKAL True PC9_epitope_Rep1 1108.5553097883198 1108.5542099358602 68.938 2 -0.02932298402836248 0.013771275257818395 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 11746 13635 DHHENKYLLL True PC9_epitope_Rep5 1280.65133543148 1280.6496749037901 57.47 3 -0.029324130634856352 0.013771275257818395 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 66617 5721 LSSPRASQSL True PC9_epitope_Rep6 1044.55637241748 1044.55526993586 30.156 2 -0.029326064045278863 0.013771275257818395 0.9438714419765777 ['ENSG00000140471|ENST00000314742|LINS1', 'ENST00000559169.1_1_15:101109445-101112292:-|nuORF'] 85961 10936 QPFAVPHSA True PC9_epitope_Rep1 952.4766655447999 952.47556993586 46.953 2 -0.02936327145580574 0.013771275257818395 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF', 'ENST00000556516.1_1_14:71517389-71527455:+|nuORF', 'PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 38579 10924 HHGLLGGAL True PC9_epitope_Rep2 873.48208527841 873.48098993586 47.341 2 -0.02936529363202349 0.013771275257818395 0.9438714419765777 ['ENST00000464036.5_1_1:1190585-1197670:-|nuORF', 'nc|ENSG00000160087|Q8N2K1-2|UBE2J2', 'ENSG00000160087|ENST00000349431|UBE2J2', 'nc|ENSG00000160087|Q8N2K1-3|UBE2J2'] 12514 10584 DLAGSIIGK True NCI_RA007_Epitope_Rep2 872.4967322830399 872.49562993586 45.768 2 -0.029371296729014094 0.013771275257818395 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 42569 10974 IESPPAFTA True H1975_Epitope_Rep3 931.46509780159 931.46454496793 47.3 1 -0.029372896662663447 0.013771275257818395 0.9438714419765777 ['ENSG00000152382|ENST00000367874|TADA1'] 21286 15606 ERIPDVAAL True PC9_epitope_Rep4 982.5447451046199 982.54419496793 67.952 1 -0.0293777692448102 0.013771275257818395 0.9438714419765777 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2', 'ATP6AP2|p.G39R|1|0.49|ENSG00000182220|chrX:40589063-40589063|G/A|missense_variant'] 101738 13879 SPHGIIVIA True PC9_epitope_Rep2 905.5334521449299 905.53234993586 58.667 2 -0.029379899116716842 0.013771275257818395 0.9438714419765777 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 103117 19148 SQLRDYITL True PC9_epitope_Rep2 1107.5924235730301 1107.5913299358601 79.024 2 -0.029386622439491274 0.013771275257818395 0.9438714419765777 ['ENSG00000175595|ENST00000311895|ERCC4'] 34428 6887 GPYGGAQPSA True PC9_epitope_Rep1 903.40864555463 903.40754993586 31.295 2 -0.029413505587802986 0.013771275257818395 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 37846 5760 HDPSAVAV True PC9_epitope_Rep1 794.3922672145001 794.39116993586 26.972 2 -0.02943742716186796 0.013771275257818395 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 140891 21572 YYVDFFKTL True PC9_epitope_Rep2 1194.5961119711399 1194.5950099358602 88.448 2 -0.029458769474357216 0.013771275257818395 0.9438714419765777 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 71984 16566 MQAERIFSEV True PC9_epitope_Rep4 1208.5859582936 1208.58486993586 71.696 2 -0.029467391597328724 0.013771275257818395 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 24510 16792 FAITAIKGV True PC9_epitope_Rep4 918.5538532363399 918.55274993586 72.561 2 -0.029501346366207444 0.013789345739553208 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18', 'ENST00000495909.2_1_5:90650295-90650631:+|nuORF'] 41369 5490 IAPALVSK True H1975_Epitope_Rep3 797.5010893874901 797.49998993586 26.17 2 -0.029530686394143146 0.013789345739553208 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 94512 15350 RYIDRIHIF True PC9_epitope_Rep2 1231.68257599011 1231.68094490379 64.324 3 -0.029543788535388166 0.013789345739553208 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 22382 6817 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54316490379 31.14 3 -0.02955436365400662 0.013789345739553208 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 57234 5783 LEFEHQRAP True NCI_RA007_Epitope_Rep4 1125.55670677065 1125.55560993586 28.866 2 -0.029572942826250892 0.013789345739553208 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 96962 10005 SEVEVIHVP True NCI_RA007_Epitope_Rep3 1007.52876068731 1007.52766993586 46.446 2 -0.029578139159626263 0.013789345739553208 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 1346 12245 AEEDPPWAP True H1975_Epitope_Rep2 1010.4345259492999 1010.43342993586 52.182 2 -0.029581514000495267 0.013789345739553208 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 140237 13468 YWQNHPEL True PC9_epitope_Rep1 1085.4930438849299 1085.49194993586 56.662 2 -0.029632887823458486 0.013789345739553208 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 23985 19184 EYPDRIMNTF True PC9_epitope_Rep5 1284.5808729131597 1284.5797699358602 78.829 2 -0.02963501235488616 0.013789345739553208 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 108283 4217 TEAVPRAPA True H1975_Epitope_Rep3 910.4872302284998 910.48612993586 21.338 2 -0.029648998961645218 0.013789345739553208 0.9438714419765777 ['ENSG00000168476|ENST00000306306|REEP4'] 107016 13950 SYLLQSTEL True NCI_RA007_Epitope_Rep3 1052.53899101784 1052.5378899358602 62.184 2 -0.02967011802880951 0.013808855268947887 0.9438714419765777 ['ENST00000418924.6_1_14:93042630-93154594:+|nuORF', 'ENSG00000100599|ENST00000216487|RIN3', 'nc|ENSG00000100599|Q8TB24-4|RIN3'] 107256 7913 SYPRRFSTL True PC9_epitope_Rep6 1125.59309227937 1125.59143490379 39.865 3 -0.02968956268526246 0.013808855268947887 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 14396 5075 DTFYRIHRRGP True H1975_Epitope_Rep2 1416.7374650972797 1416.7358249037902 24.603 3 -0.02969739363987333 0.013808855268947887 0.9438714419765777 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2'] 38291 19042 HFLDRHLVF True PC9_epitope_Rep1 1182.62981214126 1182.6281549037901 78.036 3 -0.02971306859439371 0.013808855268947887 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF', 'ENST00000519030.5_1_8:109252301-109260916:-|nuORF'] 96917 5173 SETKVFTA True NCI_RA007_Epitope_Rep5 881.4494477374499 881.44834993586 26.592 2 -0.029715674367511016 0.013808855268947887 0.9438714419765777 ['ENSG00000137073|ENST00000379238|UBAP2'] 39755 12935 HPYLPINSA True PC9_epitope_Rep1 1010.51853035678 1010.51742993586 54.627 2 -0.029725946016739075 0.013829519738496355 0.9438714419765777 ['nc|ENSG00000182979|Q13330-3|MTA1', 'ENSG00000182979|ENST00000331320|MTA1', 'ENST00000469140.2_1_14:105929892-105933123:+|nuORF'] 8942 13838 AVGPIVQL True H1975_Epitope_Rep2 795.48543932335 795.48489496793 58.374 1 -0.029763157414870088 0.013849312772376802 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.K134Rfs*14|1|0.17|ENSG00000112531|chr6:163478888-163478888|A/-|frameshift_variant'] 14269 5420 DSYVGDEAQSK True PC9_epitope_Rep3 1197.51496109797 1197.5138699358602 25.92 2 -0.02978771701843911 0.013849312772376802 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 84850 8469 QHQEHFIQM True PC9_epitope_Rep2 1196.5396768075198 1196.53804490379 37.943 3 -0.02980808153641091 0.013849312772376802 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 64097 9770 LQEDPPAGV True PC9_epitope_Rep6 924.4552613938798 924.45416993586 48.02 2 -0.029813744595549987 0.013849312772376802 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 105841 17668 SVISVVSYL True H1975_Epitope_Rep1 965.5433481222899 965.54279496793 73.54 1 -0.02987603972834346 0.01386852138936607 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3', 'ENST00000543123.1_1_11:63449027-63517671:+|nuORF', 'nc|ENSG00000133318|O95197-6|RTN3', 'nc|ENSG00000133318|O95197-5|RTN3'] 117114 13167 TYSHGNYLF True PC9_epitope_Rep6 1100.49270953176 1100.4916099358602 62.289 2 -0.029906859318054726 0.01386852138936607 0.9438714419765777 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 101629 16401 SPFGTITSA True PC9_epitope_Rep2 879.43379767331 879.43324496793 68.331 1 -0.029912591565182053 0.01386852138936607 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 68698 20431 LVDDNYFYL True PC9_epitope_Rep6 1160.5389910178399 1160.5378899358602 91.293 2 -0.029952191063924046 0.01386852138936607 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 112564 7406 TPAKAIAAV True PC9_epitope_Rep3 840.5069030439199 840.50580993586 33.495 2 -0.029956377700531882 0.01386852138936607 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant'] 97583 19657 SGYPGLLNGV True PC9_epitope_Rep4 975.5025459394699 975.50199496793 83.729 1 -0.029965860040637962 0.01386852138936607 0.9438714419765777 ['ENSG00000140006|ENST00000620954|WDR89'] 108983 8026 TEVAPPPPP True H1975_Epitope_Rep3 903.4701831820299 903.46908993586 35.845 2 -0.02998439374046518 0.013889179847072379 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 8818 14240 AVFPSIVG True H1975_Epitope_Rep1 788.4432401582 788.44269496793 59.955 1 -0.030029895559586742 0.013909837439249204 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 126770 6753 VPSLQGEKA True PC9_epitope_Rep3 927.5025459394699 927.50144993586 30.998 2 -0.030049511244985127 0.013927576601671309 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 82998 11904 PYGNIQSRL True PC9_epitope_Rep1 1046.55089311422 1046.5497899358602 50.655 2 -0.03006284105864958 0.013927576601671309 0.9438714419765777 ['ENST00000492568.1_1_1:230398346-230398752:+|nuORF', 'ENSG00000143641|ENST00000366672|GALNT2'] 101686 7680 SPGADAELP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 34.493 2 -0.030069703942278633 0.013927576601671309 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 2207 6097 AENPKLISA True NCI_RA007_Epitope_Rep4 941.5181960036099 941.51708993586 30.067 2 -0.030087462244374006 0.013927576601671309 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 96865 8313 SESRFFVSS True H1975_Epitope_Rep3 1044.48762415132 1044.48652993586 36.96 2 -0.030102229783251354 0.013927576601671309 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 58921 9112 LFVKAGID True NCI_RA007_Epitope_Rep4 861.4960040070498 861.49490993586 41.888 2 -0.03011406904444717 0.013927576601671309 0.9438714419765777 ['nc|ENSG00000112782|Q9NZA1|CLIC5', 'nc|ENSG00000112782|Q9NZA1-3|CLIC5', 'ENSG00000112782|ENST00000339561|CLIC5'] 29784 13765 FVTEGSHFVEA True PC9_epitope_Rep1 1221.56660274801 1221.56550993586 57.792 2 -0.030183611739905417 0.013927576601671309 0.9438714419765777 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 37759 5915 HAVGPSTSL True PC9_epitope_Rep4 867.4450310633501 867.44392993586 29.661 2 -0.03018370632635441 0.013927576601671309 0.9438714419765777 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 83837 12955 QEFRFLPPP True NCI_RA007_Epitope_Rep4 1129.5920296502097 1129.59092993586 56.924 2 -0.03021205964127086 0.013927576601671309 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 86631 5468 QREAEQSNVAL True PC9_epitope_Rep6 1243.61567819875 1243.61458993586 28.973 2 -0.03021830604617639 0.013927576601671309 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 40073 8092 HRAPVVAIA True PC9_epitope_Rep5 932.5555845718399 932.55448993586 36.064 2 -0.03021929686945093 0.013927576601671309 0.9438714419765777 ['ENSG00000131899|ENST00000316843|LLGL1'] 52473 6251 KPKVIIVQA True PC9_epitope_Rep4 994.6539016307798 994.65280993586 31.09 2 -0.030225524529545175 0.013948228198039708 0.9438714419765777 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF'] 76888 17121 NVKEMWTEV True PC9_epitope_Rep3 1134.53794547202 1134.5368499358601 71.009 2 -0.030299491242713254 0.014010471204188482 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 88617 15382 RAPGIQLL True PC9_epitope_Rep5 866.5337864981 866.53268993586 64.175 2 -0.030306656685675278 0.014010471204188482 0.9438714419765777 ['ENST00000476077.1_1_22:24179058-24181169:-|nuORF'] 2761 6077 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep2 863.3694835450299 863.36838993586 28.353 2 -0.030390635912622734 0.014029650724516292 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 72117 14923 MRDPTFVRL True PC9_epitope_Rep5 1133.60154878809 1133.60044993586 62.406 2 -0.030410165150407308 0.014029650724516292 0.9438714419765777 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303127-112303484:+|nuORF'] 32047 14005 GEVLMVQV True NCI_RA007_Epitope_Rep4 873.4629896266098 873.46188993586 61.144 2 -0.030431454201914433 0.014029650724516292 0.9438714419765777 ['ENSG00000120948|ENST00000240185|TARDBP'] 125988 10304 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.4914349679301 44.581 1 -0.030453347119973592 0.014029650724516292 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 23349 13632 EVTINQSLL True H1975_Epitope_Rep1 1015.55497543515 1015.55386993586 57.567 2 -0.03050186879294974 0.014029650724516292 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6B|p.V140I|1|0.08|ENSG00000185479|chr12:52451661-52451661|C/T|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'CON__P50446', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 113295 14549 TQIDHYVGI True PC9_epitope_Rep2 1044.52400966004 1044.52347496793 61.235 1 -0.030508817492567536 0.014029650724516292 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 53127 4901 KSINPDEAV True NCI_RA007_Epitope_Rep3 971.4923751785899 971.49126993586 26.269 2 -0.030558961403459643 0.01405029629164311 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000445535.1_1_1:161576981-161578004:+|nuORF', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 71204 19797 [Acetylation]-M[Oxidation]FLVNSFLK True H1975_Epitope_Rep3 1155.5998181493298 1155.59872993586 82.891 2 -0.03063135038547162 0.014065345249806393 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 52518 5261 KPPPPPPPP True PC9_epitope_Rep1 922.5276384884999 922.52654993586 25.082 2 -0.030653623556451244 0.014065345249806393 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 99299 19911 SLDKFLANV True PC9_epitope_Rep5 1005.5494961318899 1005.54838993586 81.643 2 -0.030674080401931973 0.014065345249806393 0.9438714419765777 ['CON__P01966'] 48480 4004 KEEVQAGVAA True H1975_Epitope_Rep1 1000.5189242795998 1000.51782993586 20.217 2 -0.030697208073605563 0.014065345249806393 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.R772Pfs*13|1|0.15|ENSG00000183856|chr1:156544452-156544462|CCTATAACCCC/-|frameshift_variant'] 54003 9200 KYLEERAMRQF True PC9_epitope_Rep6 1469.74491854649 1469.74327490379 45.523 3 -0.030706093434727282 0.014065345249806393 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 130926 17167 VVIGAVVAA True PC9_epitope_Rep2 797.50108938749 797.5005449679301 71.292 1 -0.030723591238116407 0.014065345249806393 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.A319E|1|0.28|ENSG00000234745|chr6:31355163-31355163|G/T|missense_variant'] 86037 14329 QPLGTLPQA True PC9_epitope_Rep4 923.5076313199098 923.50652993586 63.017 2 -0.03073985365489949 0.014065345249806393 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 95187 9067 SAAHAIVSV True PC9_epitope_Rep1 853.46576650793 853.46466993586 39.728 2 -0.030753047073414783 0.014065345249806393 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 87658 7145 QVASTLKQV True PC9_epitope_Rep3 972.5603951687598 972.55928993586 32.496 2 -0.030794013165132837 0.014065345249806393 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 116974 20690 TYPNTYIF True PC9_epitope_Rep2 1017.48074786573 1017.47964993586 85.019 2 -0.03080138304460557 0.014065345249806393 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 17449 20705 EHGIVVFSL True PC9_epitope_Rep1 999.5389314481899 999.53837496793 84.468 1 -0.030802057862271016 0.014065345249806393 0.9438714419765777 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 130561 21938 VTYPGELLL True PC9_epitope_Rep2 1003.5589981864299 1003.55847496793 89.861 1 -0.030802655788386785 0.014065345249806393 0.9438714419765777 ['ENSG00000146386|ENST00000367660|ABRACL'] 41371 6170 IAPALVSK True NCI_RA007_Epitope_Rep2 797.5010893874901 797.49998993586 28.607 2 -0.03087920702918638 0.014065345249806393 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 85113 17975 QISDTSVVL True PC9_epitope_Rep3 960.51277627 960.51222496793 74.345 1 -0.030935462803084526 0.014065345249806393 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 132701 14213 VYSEVAAYEF True NCI_RA007_Epitope_Rep4 1176.5339056373998 1176.53280993586 61.95 2 -0.030947952717698776 0.014065345249806393 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 86660 12536 QRGPPIIL True PC9_epitope_Rep6 892.5494365622399 892.54832993586 59.655 2 -0.03102174700343828 0.014065345249806393 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 69863 20140 LYAPTILLW True NCI_RA007_Epitope_Rep3 1088.6270181766 1088.62592993586 87.767 2 -0.03102293536811155 0.014065345249806393 0.9438714419765777 ['ENSG00000081051|ENST00000395792|AFP'] 17488 9794 EHGPNPIL True PC9_epitope_Rep5 875.45011644379 875.44900993586 42.642 2 -0.0310366560168832 0.014065345249806393 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 48775 8330 KEQLPPLAAA True H1975_Epitope_Rep1 1036.5916952970397 1036.5905899358602 36.974 2 -0.031041077857247048 0.014065345249806393 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 75568 9722 NQMPTQPQV True PC9_epitope_Rep6 1041.49132963277 1041.49022993586 47.8 2 -0.03104624817625522 0.014065345249806393 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 7599 17991 ASIDILHSI True PC9_epitope_Rep6 967.5338460677501 967.53274993586 81.83 2 -0.03111802409155406 0.014079497907949792 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'PSMD11|p.R20L|1|0.1|ENSG00000108671|chr17:32444582-32444582|G/T|missense_variant'] 70872 6603 M[Oxidation]EGPTPVSA True H1975_Epitope_Rep2 903.4007836733099 903.40023496793 30.309 1 -0.031125489240143446 0.014079497907949792 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 100586 19192 SLQEKLWAI True PC9_epitope_Rep4 1086.6073453611798 1086.6062499358602 81.921 2 -0.031127841525863974 0.014079497907949792 0.9438714419765777 ['ENST00000217398.3_1_20:32295514-32298573:-|nuORF', 'ENSG00000101417|ENST00000409299|PXMP4'] 34880 8100 GQVPPGESV True PC9_epitope_Rep1 868.42904664604 868.4279499358599 35.983 2 -0.031143839615610736 0.014079497907949792 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 49463 4878 KIVDQIRPDR True NCI_RA007_Epitope_Rep4 1238.7095190139398 1238.70787490379 25.212 3 -0.031144597324699857 0.014079497907949792 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000477112.1_1_22:38890609-38891019:-|nuORF', 'ENST00000497196.5_1_22:38889517-38891019:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF'] 129423 13460 VTEIMSMGY True H1975_Epitope_Rep3 1029.45110461357 1029.4500099358602 57.047 2 -0.03114674190039765 0.014079497907949792 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 57021 6479 LEEELREAA True H1975_Epitope_Rep1 1058.5244035828598 1058.5233099358602 29.982 2 -0.031190795934729947 0.014079497907949792 0.9438714419765777 ['nc|ENSG00000185347|Q86SX3-4|TEDC1', 'nc|ENSG00000185347|Q86SX3-5|TEDC1', 'nc|ENSG00000185347|Q86SX3-3|TEDC1', 'nc|ENSG00000185347|Q86SX3-2|TEDC1', 'nc|ENSG00000185347|Q86SX3-6|TEDC1', 'ENSG00000185347|ENST00000392523|TEDC1'] 69467 17101 LVSDSALYF True H1975_Epitope_Rep3 1013.50696261357 1013.50637496793 71.399 1 -0.031238571435083157 0.014079497907949792 0.9438714419765777 ['nc|ENSG00000211777|A0A0B4J244|TRAV3'] 102246 10156 SPTELPSA True PC9_epitope_Rep2 800.39159850816 800.39050993586 44.402 2 -0.03125362742087908 0.014079497907949792 0.9438714419765777 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11', 'ENST00000488544.1_1_20:3209968-3210393:-|nuORF'] 89078 4288 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 21.609 3 -0.03125844770088565 0.014079497907949792 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 128787 8460 VSREAVAL True PC9_epitope_Rep4 843.4814165720699 843.48030993586 40.007 2 -0.03127124960705315 0.014079497907949792 0.9438714419765777 ['ENSG00000091536|ENST00000647165|MYO15A'] 397 6210 AALGTDKEL True NCI_RA007_Epitope_Rep4 916.48656152216 916.48546993586 30.495 2 -0.031278406855499985 0.014079497907949792 0.9438714419765777 ['ENSG00000196628|ENST00000354452|TCF4', 'nc|ENSG00000196628|P15884-5|TCF4', 'nc|ENSG00000196628|P15884|TCF4', 'nc|ENSG00000196628|P15884-4|TCF4'] 7617 7205 ASITALEAK True PC9_epitope_Rep6 902.50729696674 902.50618993586 36.803 2 -0.0312847119031684 0.014079497907949792 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 38115 8690 HEPEPHIL True PC9_epitope_Rep5 970.4872302285 970.48612993586 38.367 2 -0.03128847971341692 0.014079497907949792 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 89079 4378 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 21.96 3 -0.03130575860434931 0.014079497907949792 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 136453 15678 YHGLTVPL True PC9_epitope_Rep4 898.4912529797799 898.49014993586 68.231 2 -0.03131849833618301 0.014079497907949792 0.9438714419765777 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 47562 22312 IYMDTLNIF True PC9_epitope_Rep4 1128.5525329069999 1128.55197496793 94.063 1 -0.03132418482537826 0.014079497907949792 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 123259 7133 VHPPPTTTY True PC9_epitope_Rep5 1011.5025459394701 1011.50144993586 32.406 2 -0.03132941090032326 0.014079497907949792 0.9438714419765777 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 52530 5014 KPPPPPPPP True PC9_epitope_Rep5 922.5276384884999 922.52654993586 24.318 2 -0.03134955106351194 0.014079497907949792 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 10940 4213 DAVTYTEHAK True PC9_epitope_Rep3 1133.53530261973 1133.53366490379 21.322 3 -0.031352204025695246 0.014079497907949792 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 138208 15974 YQSELELRV True PC9_epitope_Rep2 1135.5873381925899 1135.58624993586 66.697 2 -0.031369203776919104 0.014079497907949792 0.9438714419765777 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 63969 11499 LQAELEKAV True PC9_epitope_Rep2 999.5600608155898 999.55896993586 49.554 2 -0.031376879975097575 0.014079497907949792 0.9438714419765777 ['nc|ENSG00000168071|A6NC98-4|CCDC88B', 'ENSG00000168071|ENST00000356786|CCDC88B', 'ENST00000492980.1_1_11:64111011-64117377:+|nuORF', 'nc|ENSG00000168071|A6NC98-3|CCDC88B', 'ENST00000494566.5_1_11:64110218-64117194:+|nuORF', 'ENST00000494080.5_1_11:64109984-64120281:+|nuORF', 'nc|ENSG00000168071|A6NC98-2|CCDC88B', 'ENST00000463837.5_1_11:64107738-64120281:+|nuORF'] 9421 21544 AVVPGLLEV True PC9_epitope_Rep2 895.5378688190299 895.5373249679301 88.336 1 -0.031377690258055424 0.014079497907949792 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 137120 7773 YLDEGRLRY True H1975_Epitope_Rep2 1183.5985715826298 1183.59691490379 34.846 3 -0.031416577371652196 0.014096584610879885 0.9438714419765777 ['ENSG00000087095|ENST00000407008|NLK'] 1829 12198 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.48512993586 52.002 2 -0.03143281765049594 0.014096584610879885 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 135400 7514 YDNEFGYSNR True NCI_RA007_Epitope_Rep2 1263.5156298043098 1263.5150749679299 33.852 1 -0.031439964676457134 0.014096584610879885 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'chr12:6537216-6538101|251|78.77|0.54|7.19|+|1|GAPDH,GAPDH|1'] 118838 3227 VEEKEGIPP True H1975_Epitope_Rep2 996.5127762699998 996.51166993586 16.976 2 -0.0314729928366723 0.014096584610879885 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 33401 16608 GLFIIDDK True PC9_epitope_Rep6 919.5014833103099 919.50038993586 76.339 2 -0.03149245859051221 0.014096584610879885 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENSG00000123131|ENST00000379341|PRDX4'] 64104 14161 LQEDPPVGV True PC9_epitope_Rep5 952.4865615221598 952.48546993586 59.481 2 -0.03150475174328646 0.014096584610879885 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 69946 22676 LYEEAFTVF True PC9_epitope_Rep3 1117.53317736141 1117.53208993586 92.496 2 -0.03150561855334772 0.014096584610879885 0.9438714419765777 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 105417 17826 SVAESLNYV True PC9_epitope_Rep5 980.48147614172 980.48036993586 73.587 2 -0.03155161280638779 0.014096584610879885 0.9438714419765777 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 77805 19530 PAEPAFLA True PC9_epitope_Rep3 814.4225047136199 814.42140993586 80.353 2 -0.03158281444490568 0.014096584610879885 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 23804 13510 EYLENALKL True NCI_RA007_Epitope_Rep1 1091.58627556343 1091.5851699358602 56.557 2 -0.0315987785403493 0.014096584610879885 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7', 'ENSG00000183347|ENST00000370456|GBP6'] 26370 9513 FIHQHFTEV True PC9_epitope_Rep4 1156.56654317836 1156.56490490379 44.202 3 -0.03159948270869863 0.014096584610879885 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 24715 14979 FAVPENSSV True PC9_epitope_Rep5 948.4552613938799 948.45471496793 62.62 1 -0.03162195918213212 0.014096584610879885 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 137056 16321 YLADIFTKL True H1975_Epitope_Rep1 1082.6011973515801 1082.60010993586 68.135 2 -0.031625247308766334 0.014096584610879885 0.9438714419765777 ['ENSG00000236287|ENST00000413761|ZBED5'] 76852 19488 NVIDNLIVA True PC9_epitope_Rep6 969.5494961318899 969.5489449679301 87.623 1 -0.03169427045220924 0.014114547393513581 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 115567 8508 TVIAKVNNV True PC9_epitope_Rep3 956.5654805492 956.56438993586 37.685 2 -0.031706427040693014 0.014114547393513581 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 112907 14554 TPQEKIFIAA True PC9_epitope_Rep5 1116.6179100448799 1116.6168099358601 60.982 2 -0.031761143681886095 0.014114547393513581 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7', 'ENST00000505692.1_1_4:122780107-122782831:-|nuORF', 'ENST00000502444.1_1_4:122782546-122791468:-|nuORF'] 103015 20936 SQIYPVVCV True PC9_epitope_Rep1 1006.5157534754599 1006.5151749679301 85.352 1 -0.03176326989323665 0.014114547393513581 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 137441 17463 YLNDLIHSV True PC9_epitope_Rep6 1072.55530978832 1072.5542099358602 79.793 2 -0.03176820985536156 0.014114547393513581 0.9438714419765777 ['ENSG00000108599|ENST00000225737|AKAP10'] 46008 15332 ISVASFQEL True NCI_RA007_Epitope_Rep5 992.5178616504401 992.51676993586 65.676 2 -0.031777300531643335 0.014114547393513581 0.9438714419765777 ['nc|ENSG00000108788|Q9UH92-2|MLX', 'ENSG00000108788|ENST00000435881|MLX', 'nc|ENSG00000108788|Q9UH92|MLX', 'ENST00000585403.5_1_17:40721871-40723618:+|nuORF'] 71852 6633 MPFQGSGKSA True PC9_epitope_Rep1 1008.4698659121999 1008.46876993586 30.318 2 -0.031821643506395166 0.014114547393513581 0.9438714419765777 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 15081 7781 EAAVVAAAV True NCI_RA007_Epitope_Rep3 799.4439684341899 799.44341496793 37.73 1 -0.03183373249786985 0.014114547393513581 0.9438714419765777 ['ENSG00000154174|ENST00000284320|TOMM70'] 58521 20595 LFAGFENFLL True PC9_epitope_Rep4 1169.61209638845 1169.61098993586 87.371 2 -0.03185884317481812 0.014114547393513581 0.9438714419765777 ['ENSG00000188269|ENST00000322301|OR7A5'] 8224 21638 ATIFDLSEV True PC9_epitope_Rep4 993.5018772331299 993.50078993586 91.423 2 -0.031860474586043235 0.014114547393513581 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1'] 65059 15119 LSDLFSDDY True H1975_Epitope_Rep3 1073.45532096353 1073.4542299358602 63.554 2 -0.03192821177992602 0.014132798126777053 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 107238 8572 SYPRRFSTL True PC9_epitope_Rep2 1125.59309227937 1125.59143490379 38.333 3 -0.031934930039953124 0.014132798126777053 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 24692 19761 FAVALPQLL True H1975_Epitope_Rep2 970.5851533646198 970.5846049679301 81.983 1 -0.031959539366075145 0.014132798126777053 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant'] 54351 9170 KYQEVTNNL True PC9_epitope_Rep5 1107.5560380643099 1107.55547496793 40.219 1 -0.03196082327345778 0.014132798126777053 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 59022 8199 LGAPQTHLGLK True PC9_epitope_Rep4 1133.6556925359298 1133.65405490379 38.996 3 -0.03196117615091726 0.014132798126777053 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2', 'nc|ENSG00000115468|Q9BUP0-2|EFHD1', 'GIGYF2-EFHD1|2|fusion', 'ENSG00000115468|ENST00000264059|EFHD1'] 101519 5303 SPAHAVDAV True PC9_epitope_Rep1 865.4293809992099 865.42828993586 25.239 2 -0.031984595923449835 0.014132798126777053 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 108604 9042 TEILKSVVA True H1975_Epitope_Rep2 958.5698972232999 958.56880993586 39.733 2 -0.03198979631918042 0.014132798126777053 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 47759 7759 IYQRDPLKL True NCI_RA007_Epitope_Rep5 1144.6604435631998 1144.65880490379 36.543 3 -0.032003341580241575 0.014132798126777053 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 62646 6808 LLVSASQDGK True PC9_epitope_Rep1 1016.5502244078799 1016.54912993586 30.992 2 -0.032040381619549155 0.014132798126777053 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENSG00000172354|ENST00000303210|GNB2', 'ENSG00000114450|ENST00000232564|GNB4'] 123401 6596 VIDPGFAK True NCI_RA007_Epitope_Rep3 845.46470387877 845.46360993586 33.004 2 -0.032071672875448994 0.014151929428487814 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 113132 10441 TQAPGNPVL True PC9_epitope_Rep6 895.4763311916299 895.4752299358599 50.915 2 -0.032081796542526575 0.014151929428487814 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 103711 5327 SREEGSPQL True PC9_epitope_Rep1 1001.47778774361 1001.47668993586 25.33 2 -0.03209693887478681 0.014151929428487814 0.9438714419765777 ['ENSG00000120278|ENST00000696526|PLEKHG1'] 73035 16115 NDFQLIGIQD True H1975_Epitope_Rep1 1161.56660274801 1161.56550993586 67.33 2 -0.032108566280625146 0.014151929428487814 0.9438714419765777 ['ENSG00000132507|ENST00000336458|EIF5A', 'nc|ENSG00000132507|P63241-2|EIF5A', 'ENSG00000253626|ENST00000520547|EIF5AL1'] 74609 7237 NLDSARFRY True H1975_Epitope_Rep2 1140.5676058075198 1140.56596490379 32.771 3 -0.03211175668408366 0.014151929428487814 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 135687 11559 YEIAEGISA True H1975_Epitope_Rep3 951.4549270407099 951.45382993586 49.591 2 -0.0321683534307492 0.014151929428487814 0.9438714419765777 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000481911.5_1_6:36446898-36449467:+|nuORF'] 54464 19019 LAAAISEVV True PC9_epitope_Rep3 871.5014833103099 871.50038993586 78.379 2 -0.03218737482792521 0.0141657264635828 0.9438714419765777 ['nc|ENSG00000153113|P20810-3|CAST', 'nc|ENSG00000153113|P20810-4|CAST', 'nc|ENSG00000153113|P20810-8|CAST', 'nc|ENSG00000153113|P20810-2|CAST', 'nc|ENSG00000153113|P20810|CAST', 'nc|ENSG00000153113|P20810-9|CAST', 'nc|ENSG00000153113|P20810-5|CAST', 'nc|ENSG00000153113|P20810-10|CAST', 'nc|ENSG00000153113|P20810-7|CAST', 'ENSG00000153113|ENST00000675179|CAST'] 128341 13848 VSDMVEDLY True H1975_Epitope_Rep1 1069.4637774722498 1069.46268993586 58.413 2 -0.032195234736891586 0.0141657264635828 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 111522 20698 TLLRLLYEA True PC9_epitope_Rep2 1090.6386454894598 1090.63754993586 85.051 2 -0.032195518664155605 0.0141657264635828 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 23619 19808 EYFKSFNF True PC9_epitope_Rep2 1080.4916469026 1080.4905499358601 81.581 2 -0.03220093823132577 0.0141657264635828 0.9438714419765777 ['ENSG00000151470|ENST00000425929|C4orf33'] 8570 10293 AVADAVVTA True NCI_RA007_Epitope_Rep4 815.43888305375 815.43833496793 46.447 1 -0.032216823886919474 0.0141657264635828 0.9438714419765777 ['ENSG00000197774|ENST00000568449|EME2', 'nc|ENSG00000197774|A4GXA9-2|EME2'] 27778 12468 FQEEVFGKHV True PC9_epitope_Rep1 1218.6033226098998 1218.60166490379 52.824 3 -0.03222717367698976 0.0141657264635828 0.9438714419765777 ['ENSG00000139613|ENST00000550164|SMARCC2', 'SMARCC2|p.K898Sfs*42|1|0.2|ENSG00000139613|chr12:56168124-56168124|T/-|frameshift_variant', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2', 'ENST00000550859.5_1_12:56575573-56583167:-|nuORF'] 110176 14301 TIDNFTHGL True PC9_epitope_Rep4 1016.49270953176 1016.49160993586 62.909 2 -0.03223279662138405 0.0141657264635828 0.9438714419765777 ['nc|ENSG00000165915|Q96H72-2|SLC39A13', 'ENSG00000165915|ENST00000362021|SLC39A13'] 34713 15020 GQMIFAQAL True NCI_RA007_Epitope_Rep3 977.5004377644899 977.49934993586 66.544 2 -0.032264006265303354 0.0141657264635828 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 114248 8566 TRYQIPKEV True PC9_epitope_Rep2 1132.6240580544797 1132.62241490379 38.309 3 -0.03230305686582755 0.0141657264635828 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L'] 47554 18850 IYMDTLNIF True NCI_RA007_Epitope_Rep3 1128.5525329069999 1128.5514299358601 82.429 2 -0.03231311831869538 0.0141657264635828 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 116655 23857 TYIPPLLVAF True PC9_epitope_Rep2 1132.6532329244399 1132.65212993586 97.234 2 -0.03231537077150118 0.0141657264635828 0.9438714419765777 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF', 'ENST00000561809.1_1_16:75589903-75590146:-|nuORF'] 102620 20360 SQATDFGEALV True PC9_epitope_Rep5 1136.5349682665599 1136.53437496793 83.35 1 -0.03234867766684824 0.0141657264635828 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 95976 12206 SEAEIEREC True H1975_Epitope_Rep2 1064.44443901 1064.4433499358602 52.032 2 -0.03235388889853329 0.0141657264635828 0.9438714419765777 ['ENSG00000166262|ENST00000299338|FAM227B'] 135656 15625 YEFLTPVEEAP True H1975_Epitope_Rep3 1293.61288423409 1293.61178993586 65.518 2 -0.03235757339071391 0.0141657264635828 0.9438714419765777 ['ENSG00000141522|ENST00000269321|ARHGDIA', 'ENSG00000111348|ENST00000228945|ARHGDIB', 'chr12:14950724-14951006|170|13.59|0.37|5.18|-|ENST00000541644|ARHGDIB,ARHGDIB'] 6227 4716 APRGPGTVPA True PC9_epitope_Rep1 921.5032146458099 921.50210993586 23.01 2 -0.032397841983062635 0.0141657264635828 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 136655 8125 YIDQEELNK True PC9_epitope_Rep1 1150.5506183307 1150.5495299358602 36.082 2 -0.03242296051938412 0.0141657264635828 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 77603 13364 NYTLVSHLI True NCI_RA007_Epitope_Rep4 1058.5760452329 1058.57494993586 58.561 2 -0.032427683540676114 0.0141657264635828 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'ENST00000548630.1_1_12:57906018-57906171:+|nuORF'] 99604 13783 SLFNTGFLK True NCI_RA007_Epitope_Rep4 1025.5545815123298 1025.5534899358602 60.239 2 -0.032437812612680895 0.0141657264635828 0.9438714419765777 ['ENSG00000121486|ENST00000367506|TRMT1L'] 44574 19900 IPFGITEEA True PC9_epitope_Rep2 975.49131254943 975.49020993586 81.94 2 -0.03247914065535806 0.0141657264635828 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 106497 17327 SVVKVLTEL True PC9_epitope_Rep6 986.6011973515799 986.60010993586 79.261 2 -0.032485725993477155 0.0141657264635828 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1'] 133590 15015 WIGGSILAS True H1975_Epitope_Rep3 902.48616759934 902.48561496793 63.147 1 -0.032527274959015355 0.0141657264635828 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000428275.1_1_X:53172047-53172134:-|nuORF', 'ENST00000461125.1_1_3:179304300-179305795:+|nuORF', 'ACTB|p.S338F|2|0.28|ENSG00000075624|chr7:5527863-5527863|G/A|missense_variant', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B', 'ENST00000484312.1_1_3:179298984-179304429:+|nuORF', 'ENSG00000181786|ENST00000324436|ACTL9', 'ENSG00000138107|ENST00000369905|ACTR1A', 'ENST00000470322.5_1_10:104240622-104242055:-|nuORF', 'ENSG00000115073|ENST00000289228|ACTR1B'] 74034 12649 NHSDYNMVL True PC9_epitope_Rep4 1091.47059418819 1091.46948993586 56.494 2 -0.03252914056370182 0.0141657264635828 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 91439 15751 RNLVTEVL True PC9_epitope_Rep5 942.5498304850599 942.54872993586 65.585 2 -0.032544523646202174 0.0141657264635828 0.9438714419765777 ['ENST00000591735.2_1_19:1491211-1495711:+|nuORF', 'ENSG00000115255|ENST00000233596|REEP6', 'nc|ENSG00000115255|Q96HR9|REEP6'] 139580 15673 YTPEAFNWR True PC9_epitope_Rep6 1182.54580773378 1182.54470993586 72.496 2 -0.03255070676316405 0.0141657264635828 0.9438714419765777 ['ENSG00000254986|ENST00000531863|DPP3', 'nc|ENSG00000254986|Q9NY33-4|DPP3'] 29298 15509 FVDPLVTNY True H1975_Epitope_Rep2 1066.53351171458 1066.5324099358602 64.812 2 -0.03259406702178874 0.014186323464889372 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'ENST00000486825.6_1_1:40315918-40341739:-|nuORF', 'ENST00000462243.2_1_1:40318401-40323020:-|nuORF'] 123171 11532 VHGPPVQL True PC9_epitope_Rep3 845.47593726881 845.47484993586 49.367 2 -0.03261945407327883 0.014205138917902652 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 76194 8600 NRVAVQGDVV True PC9_epitope_Rep1 1055.5723568347898 1055.5712499358601 37.915 2 -0.03263833955077543 0.014205138917902652 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 139579 17519 YTPEAFNWR True PC9_epitope_Rep2 1182.54580773378 1182.54470993586 72.648 2 -0.03266136653093087 0.014205138917902652 0.9438714419765777 ['ENSG00000254986|ENST00000531863|DPP3', 'nc|ENSG00000254986|Q9NY33-4|DPP3'] 8831 18613 AVFPSIVG True PC9_epitope_Rep6 788.4432401582 788.44269496793 84.238 1 -0.03268729444657041 0.014205138917902652 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 34832 12833 GQVGGEINV True PC9_epitope_Rep5 871.43994568291 871.4393949679301 54.373 1 -0.03272087422101352 0.014205138917902652 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 43489 12084 IHYNSHFEVP True PC9_epitope_Rep3 1241.5829215184901 1241.58127490379 51.524 3 -0.03272179988845853 0.014205138917902652 0.9438714419765777 ['nc|ENSG00000080845|Q9Y2H0-1|DLGAP4', 'ENSG00000080845|ENST00000339266|DLGAP4'] 20080 8973 ENGSLYDY True H1975_Epitope_Rep2 959.38724140371 959.3866949679301 39.47 1 -0.032749859294936075 0.014205138917902652 0.9438714419765777 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 140294 11839 YYDKHFTEF True PC9_epitope_Rep4 1248.54513902744 1248.5440499358601 53.312 2 -0.03279244880583811 0.014224543080939948 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 117075 22123 TYQVLAVTF True PC9_epitope_Rep1 1040.5542471591598 1040.55367496793 89.908 1 -0.03279472089437123 0.014224543080939948 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 66903 19450 LSWRLCFNQVL True PC9_epitope_Rep3 1377.72272654993 1377.7216299358602 80.04 2 -0.03279657599900809 0.014224543080939948 0.9438714419765777 ['ENST00000382044.8_1_15:43699501-43699630:-|nuORF'] 6853 3595 AQIENSAAVQK True NCI_RA007_Epitope_Rep3 1157.6040508858898 1157.6029499358601 20.011 2 -0.032804670912071364 0.014224543080939948 0.9438714419765777 ['ENSG00000117228|ENST00000370473|GBP1', 'nc|ENSG00000117226|Q9H0R5-4|GBP3', 'ENSG00000117226|ENST00000370481|GBP3', 'ENST00000394662.2_1_1:89887573-89889825:+|nuORF'] 43530 11703 IIDNNDTQL True PC9_epitope_Rep4 1044.50875351872 1044.5076499358602 52.777 2 -0.032928055444240295 0.014224543080939948 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 86467 9018 QQSSIHNVL True PC9_epitope_Rep1 1024.53015766964 1024.5290699358602 39.535 2 -0.03295944155164236 0.014244240690072891 0.9438714419765777 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'ENST00000583577.1_1_17:56283442-56283917:-|nuORF'] 107390 11168 SYSSTFHSL True PC9_epitope_Rep4 1027.46107505031 1027.45996993586 50.736 2 -0.0329806482871497 0.014244240690072891 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 30378 8716 GAERITDVAL True NCI_RA007_Epitope_Rep3 1043.56112344475 1043.56002993586 41.37 2 -0.032998657714791574 0.014244240690072891 0.9438714419765777 ['ENST00000473604.2_1_9:132580793-132585603:-|nuORF', 'ENSG00000136827|ENST00000351698|TOR1A'] 39608 9592 HPLLGVSA True PC9_epitope_Rep4 792.4493881678001 792.4488349679301 44.521 1 -0.03303178138316661 0.014244240690072891 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 10121 18515 AYYPAQGVQQF True PC9_epitope_Rep2 1270.59823722946 1270.5971499358602 76.562 2 -0.033089288949818774 0.014284520925570128 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 41208 13701 IADGLPVAV True NCI_RA007_Epitope_Rep4 853.49091862661 853.49037496793 59.925 1 -0.033105029867632245 0.014284520925570128 0.9438714419765777 ['ENSG00000198355|ENST00000360612|PIM3'] 65536 17957 LSGALVSFL True H1975_Epitope_Rep2 905.52221875489 905.52167496793 74.394 1 -0.033107065813118355 0.014284520925570128 0.9438714419765777 ['ENST00000487582.1_2_12:56226726-56226987:+|nuORF'] 9894 12754 AYNPNTQTF True PC9_epitope_Rep1 1054.4719740871801 1054.47086993586 53.932 2 -0.033141174894755855 0.014284520925570128 0.9438714419765777 ['ENSG00000174405|ENST00000442234|LIG4', 'LIG4|p.G346Efs*10|1|0.4|ENSG00000174405|chr13:108210232-108210232|C/-|frameshift_variant'] 62172 14419 LLPHVVPGTT True PC9_epitope_Rep5 1032.59678067748 1032.59568993586 60.463 2 -0.033207097185285195 0.014284520925570128 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 1405 14244 AEEFPNLAVA True H1975_Epitope_Rep2 1059.5236753068698 1059.52317496793 59.939 1 -0.03323586565388754 0.014325690180846177 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 112844 17032 TPMSVLQQA True PC9_epitope_Rep1 973.49026700361 973.48916993586 70.337 2 -0.03323676897617532 0.014325690180846177 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant'] 103242 15233 SQSSLIHLV True PC9_epitope_Rep4 982.5447451046201 982.54364993586 66.522 2 -0.033250442519766436 0.014345075275103881 0.9438714419765777 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ACOT7|p.R364Gfs*5|1|0.24|ENSG00000097021|chr1:6264651-6264651|C/-|frameshift_variant', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 97585 18493 SGYPGLLNGV True PC9_epitope_Rep6 975.5025459394699 975.50144993586 83.774 2 -0.03325561051160406 0.014345075275103881 0.9438714419765777 ['ENSG00000140006|ENST00000620954|WDR89'] 25984 13847 FGYQFTQQGPR True PC9_epitope_Rep2 1327.6309343400699 1327.62982993586 58.545 2 -0.033285224809797814 0.014345075275103881 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 136194 22098 YGLEKFWAF True PC9_epitope_Rep5 1159.57023157647 1159.56912993586 90.032 2 -0.03328599619439348 0.014345075275103881 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 70801 9547 M[Oxidation]EENFAVEA True H1975_Epitope_Rep3 1054.4277266971399 1054.42662993586 41.731 2 -0.03330940379315228 0.014345075275103881 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 6359 7716 APRQPGLMA True PC9_epitope_Rep1 939.4960210903898 939.49492993586 34.499 2 -0.03332593735709489 0.014359959090814218 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 114975 5920 TTISKVSQV True PC9_epitope_Rep2 961.5444107514498 961.54330993586 28.163 2 -0.0333682955680725 0.014359959090814218 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 2844 8087 AEVRVIAPP True NCI_RA007_Epitope_Rep4 950.5549158654998 950.55380993586 37.892 2 -0.033396304618012046 0.014359959090814218 0.9438714419765777 ['nc|ENSG00000172731|Q8TCA0-3|LRRC20', 'nc|ENSG00000172731|Q8TCA0-2|LRRC20', 'ENSG00000172731|ENST00000446961|LRRC20'] 39601 11187 HPLLGVSA True PC9_epitope_Rep1 792.4493881678001 792.44828993586 47.913 2 -0.03340546026187017 0.014359959090814218 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 75895 10281 NRDQYSHLL True PC9_epitope_Rep5 1144.56252042708 1144.5614299358601 44.534 2 -0.03343479325727459 0.014359959090814218 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 109768 12946 THISDTSVVL True PC9_epitope_Rep2 1070.56078909158 1070.56027496793 55.09 1 -0.033465030250504534 0.014359959090814218 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446'] 6235 4701 APRGPGTVPA True PC9_epitope_Rep5 921.5032146458099 921.50210993586 23.133 2 -0.033485935484379795 0.014359959090814218 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 40558 4302 HSSNVKVVL True NCI_RA007_Epitope_Rep5 981.5607295219299 981.55962993586 23.134 2 -0.03350863802833066 0.014359959090814218 0.9438714419765777 ['ENSG00000055483|ENST00000449938|USP36', 'USP36|p.K1086Nfs*25|1|0.3|ENSG00000055483|chr17:78798534-78798534|T/-|frameshift_variant', 'USP36|p.Q806Rfs*91|1|0.52|ENSG00000055483|chr17:78803778-78803778|T/-|frameshift_variant'] 41628 12706 IDHDQVLV True PC9_epitope_Rep6 937.48689587533 937.48578993586 60.352 2 -0.03351263559915323 0.014359959090814218 0.9438714419765777 ['nc|ENSG00000159023|P11171-4|EPB41', 'nc|ENSG00000159023|P11171-6|EPB41', 'nc|ENSG00000159023|P11171-3|EPB41', 'nc|ENSG00000159023|P11171-5|EPB41', 'nc|ENSG00000159023|P11171-2|EPB41', 'ENSG00000159023|ENST00000343067|EPB41'] 126025 7254 VPAPAPAAA True PC9_epitope_Rep5 763.42283906679 763.42174993586 32.867 2 -0.03353276412564403 0.014359959090814218 0.9438714419765777 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 17246 8631 EHANDYAEI True PC9_epitope_Rep2 1060.44615326216 1060.4450499358602 38.566 2 -0.03354589350091407 0.014359959090814218 0.9438714419765777 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 32105 13752 GEYGNLVTI True NCI_RA007_Epitope_Rep4 964.48656152216 964.48546993586 60.124 2 -0.03355759094595323 0.014359959090814218 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525056.1_1_11:108203545-108206748:+|nuORF'] 67456 10731 LTEEALAESA True H1975_Epitope_Rep1 1032.4975201286798 1032.4969749679299 46.239 1 -0.03357000087101172 0.014359959090814218 0.9438714419765777 ['ENSG00000047662|ENST00000265018|FAM184B'] 48779 8561 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 37.883 2 -0.03361654841433195 0.014359959090814218 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 105790 18861 SVIGTSVVQV True PC9_epitope_Rep2 987.56006081559 987.55896993586 77.916 2 -0.03362291736081823 0.014359959090814218 0.9438714419765777 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant'] 5599 14102 ANVTVTVLS True PC9_epitope_Rep3 902.50729696674 902.5067449679301 59.328 1 -0.03362721054970854 0.014359959090814218 0.9438714419765777 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1'] 118343 7594 VDFNVPM[Oxidation]K True H1975_Epitope_Rep1 964.4688036634799 964.46770993586 34.203 2 -0.03362759731752362 0.014359959090814218 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'ENSG00000170950|ENST00000304801|PGK2', 'chrX:78105340-78109867|217|73.31|0.48|7.26|+|1|None,PGK1|1'] 112667 3885 TPFQGQGHGA True PC9_epitope_Rep4 998.4569927293797 998.45588993586 21.125 2 -0.03365913516642317 0.014359959090814218 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 103310 8304 SQTTVYEKL True PC9_epitope_Rep6 1067.54989005471 1067.5487899358602 41.567 2 -0.033709982950982466 0.014359959090814218 0.9438714419765777 ['ENSG00000118193|ENST00000367350|KIF14'] 53819 15837 KYFLWVVKF True NCI_RA007_Epitope_Rep5 1228.7008518231999 1228.6997499358602 67.638 2 -0.033712626764033395 0.014359959090814218 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 35429 15484 GTDPLVLAV True H1975_Epitope_Rep2 883.5014833103099 883.5009349679301 64.716 1 -0.03374716159308696 0.014379030406744996 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'AFAP1-ABLIM2|10|fusion'] 3498 14869 AGLQFPVGR True PC9_epitope_Rep1 943.5239500903898 943.5234049679301 62.013 1 -0.0337635813392708 0.014379030406744996 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 3426 9225 AGLAKSIGV True PC9_epitope_Rep4 814.4912529797799 814.49014993586 43.081 2 -0.0337911171957339 0.014379030406744996 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|250|16.96|0.18|6.55|+|ENST00000602997|AKR1C3,AKR1C3', 'ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|317|31.41|0.67|5.55|+|ENST00000380859|AKR1C1,AKR1C1', 'chr10:4963893-4965914|317|27.99|0.97|4.85|+|ENST00000380859|AKR1C1,AKR1C1'] 74338 21767 NIPPYFVAL True PC9_epitope_Rep4 1032.56441792004 1032.56332993586 91.921 2 -0.03379120203091259 0.014379030406744996 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 24553 11917 FALNNPEM True NCI_RA007_Epitope_Rep3 934.42185309062 934.42074993586 54.007 2 -0.03379883557478688 0.014379030406744996 0.9438714419765777 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1'] 37853 5765 HDPSAVAV True PC9_epitope_Rep5 794.3922672145001 794.39116993586 27.168 2 -0.03380371758471663 0.014379030406744996 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 14876 21112 DYGNGFGGF True PC9_epitope_Rep5 932.3664463894798 932.3658949679301 86.273 1 -0.03382740778124003 0.014398397395768123 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 6433 8231 APSGSQGVL True PC9_epitope_Rep2 814.4184819623399 814.41738993586 37.017 2 -0.033850988443112656 0.014398397395768123 0.9438714419765777 ['nc|ENSG00000221978|Q96S94-5|CCNL2', 'nc|ENSG00000221978|Q96S94-2|CCNL2', 'nc|ENSG00000221978|Q96S94-4|CCNL2', 'ENSG00000221978|ENST00000400809|CCNL2'] 125103 16550 VLPGVDALSNI True H1975_Epitope_Rep1 1096.61282466444 1096.61227496793 69.034 1 -0.03385706723822714 0.014398397395768123 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 139884 11986 YVDRGYYSV True PC9_epitope_Rep5 1120.5189242796 1120.5178299358602 51.1 2 -0.033873706983321025 0.014398397395768123 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENST00000520515.5_1_5:133541561-133657575:-|nuORF'] 77446 8720 NYNNQSSNF True PC9_epitope_Rep5 1086.4366512076201 1086.43554993586 38.484 2 -0.033881348324726716 0.014398397395768123 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 40920 16768 HVVEILVET True PC9_epitope_Rep1 1037.57571087973 1037.57460993586 69.322 2 -0.033906475098789926 0.014417158713931023 0.9438714419765777 ['ENSG00000170779|ENST00000336219|CDCA4'] 27935 14639 FQPPGPQAV True PC9_epitope_Rep2 939.4814165720697 939.48030993586 61.577 2 -0.03392354930627021 0.014417158713931023 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 137462 21294 YLPDSLTQL True PC9_epitope_Rep1 1048.54407639828 1048.54357496793 86.735 1 -0.033933945264197574 0.014417158713931023 0.9438714419765777 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'nc|ENSG00000137269|Q9BTT6-2|LRRC1'] 124 20086 AAAWPLLL True H1975_Epitope_Rep2 853.5061747679299 853.50506993586 83.244 2 -0.0339507550125184 0.014417158713931023 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 7597 19130 ASIDILHSI True PC9_epitope_Rep4 967.5338460677501 967.53274993586 81.676 2 -0.03396035626123428 0.014417158713931023 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'PSMD11|p.R20L|1|0.1|ENSG00000108671|chr17:32444582-32444582|G/T|missense_variant'] 101690 7801 SPGADAELP True H1975_Epitope_Rep3 855.3974121645899 855.39630993586 34.99 2 -0.033965305839519455 0.014417158713931023 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 17595 15842 EHLQVITTL True PC9_epitope_Rep4 1052.5866099166 1052.58607496793 68.86 1 -0.033989953993904136 0.014417158713931023 0.9438714419765777 ['nc|ENSG00000039560|Q9P0K7-4|RAI14', 'nc|ENSG00000039560|Q9P0K7-3|RAI14', 'ENSG00000039560|ENST00000265109|RAI14', 'nc|ENSG00000039560|Q9P0K7-2|RAI14'] 42562 8681 IESPAVAAP True H1975_Epitope_Rep2 853.4545331178899 853.4539849679301 38.352 1 -0.03400931858071421 0.014437119252274054 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 116894 18513 TYPAELNNI True PC9_epitope_Rep5 1033.50802524273 1033.50747496793 76.234 1 -0.03401144234787179 0.014437119252274054 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 97992 15089 SHSLSELL True PC9_epitope_Rep4 884.46034677432 884.45924993586 65.973 2 -0.03401603264373965 0.014437119252274054 0.9438714419765777 ['nc|ENSG00000116044|Q16236-3|NFE2L2', 'nc|ENSG00000116044|Q16236-2|NFE2L2', 'ENSG00000116044|ENST00000397062|NFE2L2'] 84511 13033 QGTLSVVTV True PC9_epitope_Rep4 902.50729696674 902.5067449679301 58.025 1 -0.03404466220290161 0.014453760480540609 0.9438714419765777 ['CON__Q2UVX4'] 63128 21939 LNPYTLYTF True PC9_epitope_Rep2 1130.5648118428599 1130.56370993586 89.865 2 -0.03405370780837302 0.014453760480540609 0.9438714419765777 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF'] 1062 12403 AEALAAFTA True H1975_Epitope_Rep3 863.43888305375 863.43833496793 52.897 1 -0.03405586557511788 0.014453760480540609 0.9438714419765777 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000472050.5_1_2:203130664-203149064:+|nuORF'] 2631 7504 AESPGVPVA True NCI_RA007_Epitope_Rep4 825.4232329896099 825.4226849679301 35.509 1 -0.03406143854333687 0.014453760480540609 0.9438714419765777 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 7413 3950 ASASASLPTK True NCI_RA007_Epitope_Rep4 931.4974605590301 931.49636993586 21.43 2 -0.03410333462689891 0.014453760480540609 0.9438714419765777 ['ENSG00000141568|ENST00000335255|FOXK2', 'ENST00000571989.1_1_17:80551586-80559372:+|nuORF', 'ENST00000473637.6_1_17:80553997-80559372:+|nuORF', 'ENST00000529652.1_1_17:80558017-80559372:+|nuORF'] 24508 17470 FAITAIKGV True PC9_epitope_Rep2 918.5538532363399 918.55274993586 72.45 2 -0.03412535899376109 0.014453760480540609 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18', 'ENST00000495909.2_1_5:90650295-90650631:+|nuORF'] 75289 11364 NPSSVIHVV True PC9_epitope_Rep2 950.51853035678 950.51742993586 49.034 2 -0.03414597110280312 0.014453760480540609 0.9438714419765777 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP'] 17845 8220 EIAQDFKTDLR True NCI_RA007_Epitope_Rep4 1334.68302948258 1334.6813849037899 38.406 3 -0.03417560275665405 0.014453760480540609 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 69286 8311 LVPEQIGK True NCI_RA007_Epitope_Rep2 882.5174677276199 882.51636993586 36.967 2 -0.03418801817705128 0.014453760480540609 0.9438714419765777 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1', 'ENST00000570977.1_1_17:52992089-53007568:+|nuORF', 'nc|ENSG00000141198|O75674-2|TOM1L1'] 103169 9272 SQPEKVYTL True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 43.269 2 -0.03424554190919189 0.014453760480540609 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 84849 10347 QHQEHFIQM True PC9_epitope_Rep1 1196.5396768075198 1196.53804490379 44.681 3 -0.03425719640055751 0.014453760480540609 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 91965 5637 RPPPPPPPP True PC9_epitope_Rep5 950.5337864980999 950.53268993586 26.682 2 -0.034281906850578296 0.014453760480540609 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 5159 20968 ALPDDLVEV True PC9_epitope_Rep5 969.5018772331299 969.50078993586 85.714 2 -0.03428237701753407 0.014453760480540609 0.9438714419765777 ['ENSG00000120756|ENST00000457734|PLS1'] 31786 10011 GELRSYLV True H1975_Epitope_Rep2 935.5076313199098 935.50652993586 43.498 2 -0.03432653644115067 0.014453760480540609 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 88056 18822 QVVGGIYGV True PC9_epitope_Rep1 890.4861675993399 890.48506993586 77.185 2 -0.034352113394888105 0.014472806139472806 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 31814 9781 GEM[Oxidation]EPPALP True H1975_Epitope_Rep3 955.4320838015898 955.43098993586 42.646 2 -0.034355465534516315 0.014472806139472806 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 6423 13198 APSGNFVAC True PC9_epitope_Rep5 864.37998827864 864.37888993586 55.773 2 -0.03436312685519405 0.014472806139472806 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 138164 9736 YQNENEVGV True PC9_epitope_Rep5 1050.4618033262998 1050.4607099358602 42.42 2 -0.03436850992068169 0.014472806139472806 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 72027 18090 MQMSPALTC True PC9_epitope_Rep3 980.4129452830399 980.41184993586 74.78 2 -0.034408379066234895 0.014472806139472806 0.9438714419765777 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 101971 13680 SPMPGTLTA True PC9_epitope_Rep5 873.4266041178901 873.42550993586 57.646 2 -0.03440948964151395 0.014472806139472806 0.9438714419765777 ['ENSG00000113456|ENST00000382038|RAD1'] 6741 16172 AQDPTAFSV True PC9_epitope_Rep2 934.4396113297399 934.43850993586 67.459 2 -0.03444430911672242 0.014493055845184968 0.9438714419765777 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 97252 18085 SFNDTFVHV True PC9_epitope_Rep5 1064.49270953176 1064.4916099358602 74.577 2 -0.03444634033696033 0.014493055845184968 0.9438714419765777 ['ENSG00000164587|ENST00000407193|RPS14', 'ENST00000519690.1_1_5:149827146-149827347:-|nuORF'] 101740 13224 SPHGIIVIA True PC9_epitope_Rep4 905.5334521449299 905.53234993586 58.761 2 -0.03446230499211353 0.014511790830049415 0.9438714419765777 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 107702 17693 TALLKIEGV True PC9_epitope_Rep1 942.57498260374 942.57388993586 72.852 2 -0.03448619224553331 0.014511790830049415 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 76798 19887 NVDTSWPVL True PC9_epitope_Rep3 1029.51311062317 1029.51200993586 81.734 2 -0.03449437491146115 0.014511790830049415 0.9438714419765777 ['ENST00000275364.7_1_7:2769482-2769623:-|nuORF'] 71769 10689 MNFKTPRGPV True PC9_epitope_Rep5 1145.60154878809 1145.59990490379 46.106 3 -0.034494548276649925 0.014511790830049415 0.9438714419765777 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561157.5_1_15:83205554-83205662:-|nuORF', 'ENST00000558397.1_1_15:83205554-83206687:-|nuORF'] 110478 19652 TIPNNLIGC True PC9_epitope_Rep5 943.47970231991 943.47860993586 80.648 2 -0.03455439495236038 0.014511790830049415 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1'] 88600 12723 RALNQEQVIAV True PC9_epitope_Rep2 1239.6935345966301 1239.6924299358602 54.245 2 -0.034576505265465456 0.014511790830049415 0.9438714419765777 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 140079 17625 YVNKFASLF True PC9_epitope_Rep4 1087.57023157647 1087.56912993586 75.815 2 -0.03458158242216412 0.014511790830049415 0.9438714419765777 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4', 'ENST00000573023.6_1_16:67984709-67996179:-|nuORF', 'nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6'] 40248 12003 HRIQDLEQL True PC9_epitope_Rep2 1150.6094706195 1150.60783490379 51.487 3 -0.03469267768695276 0.014552884515147092 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 127013 8291 VPYEIQKGQA True PC9_epitope_Rep5 1131.59242357303 1131.5913299358601 36.83 2 -0.034713746049126214 0.014552884515147092 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI', 'ENST00000491771.5_1_2:152135291-152146334:-|nuORF'] 14329 17252 DTDIVDEAIYY True H1975_Epitope_Rep2 1315.58197802863 1315.58147496793 71.65 1 -0.034744966695547434 0.014589412255106295 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3'] 31996 12662 GETIFVTAP True NCI_RA007_Epitope_Rep3 933.48074786573 933.4801949679301 57.049 1 -0.03475290501399711 0.014589412255106295 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 109728 16042 THGIFTIST True PC9_epitope_Rep3 975.5025459394701 975.50144993586 66.855 2 -0.03479727586649285 0.014589412255106295 0.9438714419765777 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 70603 19868 M[Oxidation]AAAWPLLL True H1975_Epitope_Rep2 1000.5415746809199 1000.54046993586 82.405 2 -0.034802973427845336 0.014589412255106295 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 38073 6909 HEMVVYEA True NCI_RA007_Epitope_Rep3 976.4324177743199 976.43132993586 34.281 2 -0.03484069687052493 0.014589412255106295 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 69563 21510 LVTGYFMQV True PC9_epitope_Rep2 1056.5314035396 1056.53030993586 88.206 2 -0.03486604132525394 0.014589412255106295 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15', 'ENST00000512903.1_1_4:24529549-24534804:-|nuORF', 'ENST00000508032.5_1_4:24529549-24538851:-|nuORF', 'ENST00000508368.1_1_4:24529637-24534570:-|nuORF', 'ENST00000510645.5_1_4:24519211-24534570:-|nuORF'] 107059 13708 SYLPTAERL True PC9_epitope_Rep4 1048.55530978832 1048.5542099358602 60.615 2 -0.034913711654435776 0.014589412255106295 0.9438714419765777 ['ENSG00000173227|ENST00000527043|SYT12'] 13394 8990 DNIQTVKRLRT True PC9_epitope_Rep4 1342.7680965192199 1342.76644490379 42.136 3 -0.03492068286404102 0.014589412255106295 0.9438714419765777 103168 9797 SQPEKVYTL True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 43.022 2 -0.034933184043881536 0.014589412255106295 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 112995 9967 TPSQIGVILR True H1975_Epitope_Rep1 1082.64479349906 1082.64368993586 43.274 2 -0.0349491858702248 0.014589412255106295 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF'] 135902 13448 YESSTASALVA True PC9_epitope_Rep5 1097.52406922969 1097.5229699358601 56.744 2 -0.034963169617374064 0.014589412255106295 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 77443 7478 NYNNQSSNF True PC9_epitope_Rep4 1086.4366512076201 1086.43554993586 36.122 2 -0.03496548074235671 0.014589412255106295 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 54721 6990 LAELEKRLKET True NCI_RA007_Epitope_Rep1 1328.7663651837197 1328.76472490379 31.189 3 -0.034986126149379515 0.014589412255106295 0.9438714419765777 ['PARN|p.F419Lfs*7|1|0.37|ENSG00000140694|chr16:14580879-14580879|A/-|frameshift_variant', 'nc|ENSG00000140694|O95453-4|PARN', 'nc|ENSG00000140694|O95453-2|PARN', 'nc|ENSG00000140694|O95453-3|PARN', 'ENSG00000140694|ENST00000437198|PARN', 'ENST00000562715.1_1_16:14670117-14678644:-|nuORF'] 137973 6868 YQAEAREAL True PC9_epitope_Rep2 1049.5141732523298 1049.5130699358601 31.82 2 -0.03502473238376504 0.014589412255106295 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 4004 13535 AHGVSLVL True PC9_epitope_Rep2 794.46503823194 794.46394993586 57.355 2 -0.03503551524362138 0.014589412255106295 0.9438714419765777 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 35284 8814 GSPRVSGTAL True PC9_epitope_Rep3 943.5086939490699 943.50758993586 38.853 2 -0.03504078045146802 0.014589412255106295 0.9438714419765777 ['ENST00000379613.7_1_6:10398366-10398585:-|nuORF'] 86044 19252 QPLIGAIAA True PC9_epitope_Rep5 852.5069030439199 852.50580993586 79.094 2 -0.03507554845410846 0.014589412255106295 0.9438714419765777 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 6370 6349 APRQPGLMA True PC9_epitope_Rep4 939.4960210903898 939.49492993586 31.497 2 -0.035088575987645525 0.014605688092509636 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 104509 10873 SSQAPVIY True H1975_Epitope_Rep2 863.43888305375 863.43833496793 46.852 1 -0.03509168573960431 0.014605688092509636 0.9438714419765777 ['ENST00000520124.5_1_8:22005675-22011752:-|nuORF', 'nc|ENSG00000168481|Q8N145-2|LGI3', 'ENSG00000168481|ENST00000306317|LGI3'] 13395 9071 DNIQTVKRLRT True PC9_epitope_Rep4 1342.7680965192199 1342.76644490379 42.475 3 -0.03509560476426145 0.014605688092509636 0.9438714419765777 56687 8110 LEAEEWCK True H1975_Epitope_Rep1 1006.4429824580199 1006.44188993586 36.14 2 -0.03514093005534984 0.014605688092509636 0.9438714419765777 ['ENSG00000206052|ENST00000382713|DOK6'] 1920 5007 AEINGTM[Oxidation]NA True H1975_Epitope_Rep3 935.4018463024701 935.40074993586 24.385 2 -0.03516882300883179 0.014605688092509636 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6'] 100543 17981 SLPTNLTVAT True PC9_epitope_Rep3 1015.55497543515 1015.55386993586 74.367 2 -0.03520304128442575 0.014605688092509636 0.9438714419765777 ['ENSG00000138074|ENST00000310574|SLC5A6', 'ENST00000461757.1_1_2:27424532-27424700:-|nuORF'] 34907 6580 GQVTEAVKV True PC9_epitope_Rep6 929.5181960036099 929.51708993586 34.014 2 -0.03520488238988574 0.014605688092509636 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 2744 9498 AEVAIVSAA True H1975_Epitope_Rep2 829.4545331178899 829.4539849679301 41.503 1 -0.03520720078029644 0.014605688092509636 0.9438714419765777 ['ENST00000440088.5_1_7:77325266-77325488:-|nuORF'] 106005 22072 SVLLLNPAL True PC9_epitope_Rep1 938.58006798418 938.57896993586 89.709 2 -0.035228685565112924 0.014605688092509636 0.9438714419765777 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1'] 38802 6462 HHYSGNNIEL True PC9_epitope_Rep6 1182.5417849825 1182.54013490379 33.496 3 -0.03524441468057161 0.014605688092509636 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 8293 18153 ATLEKVIEI True PC9_epitope_Rep1 1014.5961119711399 1014.59500993586 74.615 2 -0.03526674891633589 0.014605688092509636 0.9438714419765777 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 85841 8641 QMTDQVADLR True H1975_Epitope_Rep1 1175.5604718217498 1175.55936993586 38.166 2 -0.03531270212263357 0.014605688092509636 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 125997 9599 VPAGGAVAVSA True PC9_epitope_Rep4 897.4919812557699 897.49088993586 44.548 2 -0.035335172722912034 0.014605688092509636 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 126346 7788 VPKNSDPWAA True PC9_epitope_Rep6 1083.53490869691 1083.53380993586 39.343 2 -0.03535401920008044 0.014605688092509636 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 5932 11026 APHPPLSVV True PC9_epitope_Rep6 915.51780208079 915.51670993586 53.315 2 -0.03535602899444605 0.014605688092509636 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 69441 6815 LVRPPTEQA True PC9_epitope_Rep3 1009.55564414149 1009.55454993586 31.231 2 -0.035377701037216214 0.014643697794071698 0.9438714419765777 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 2385 16819 AEQIPLLVQGV True H1975_Epitope_Rep2 1165.6706738937298 1165.6695699358602 69.941 2 -0.03537982944208572 0.014643697794071698 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 46262 15762 ITDVIIGFQ True H1975_Epitope_Rep3 1004.5542471591598 1004.5536749679301 66.074 1 -0.03538879009716821 0.014643697794071698 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 32064 5464 GEVTNVTTA True H1975_Epitope_Rep2 890.4345259493 890.43342993586 26.044 2 -0.03541561702281112 0.014643697794071698 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 63588 20485 LPLLPAPGAAA True PC9_epitope_Rep5 989.5909670210498 989.58986993586 83.834 2 -0.03543649080550928 0.014643697794071698 0.9438714419765777 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 2498 12978 AEQPYFIEA True H1975_Epitope_Rep1 1066.49712620586 1066.4960299358602 54.997 2 -0.03544742145273261 0.014643697794071698 0.9438714419765777 ['ENSG00000123607|ENST00000243344|TTC21B'] 108967 7808 TEVAPPPPP True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 34.981 2 -0.0354862748874807 0.014643697794071698 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 35496 7435 GTFPGNYVK True NCI_RA007_Epitope_Rep3 981.4919812557698 981.49088993586 36.37 2 -0.0355461227898306 0.014643697794071698 0.9438714419765777 ['nc|ENSG00000095637|Q9BX66-12|SORBS1', 'nc|ENSG00000095637|Q9BX66-9|SORBS1', 'ENSG00000095637|ENST00000371247|SORBS1', 'nc|ENSG00000095637|Q9BX66-11|SORBS1', 'nc|ENSG00000095637|Q9BX66-2|SORBS1', 'nc|ENSG00000095637|Q9BX66-5|SORBS1', 'nc|ENSG00000095637|Q9BX66-3|SORBS1', 'nc|ENSG00000095637|Q9BX66-6|SORBS1', 'nc|ENSG00000095637|Q9BX66-10|SORBS1', 'nc|ENSG00000095637|Q9BX66-8|SORBS1', 'nc|ENSG00000095637|Q9BX66-4|SORBS1', 'nc|ENSG00000154556|O94875-12|SORBS2', 'nc|ENSG00000154556|O94875-10|SORBS2', 'nc|ENSG00000154556|O94875-4|SORBS2', 'nc|ENSG00000154556|O94875-2|SORBS2', 'nc|ENSG00000154556|O94875-8|SORBS2', 'nc|ENSG00000154556|O94875-3|SORBS2', 'nc|ENSG00000154556|O94875-9|SORBS2', 'ENST00000478461.1_1_4:186508783-186510953:-|nuORF', 'nc|ENSG00000154556|O94875-7|SORBS2', 'nc|ENSG00000154556|O94875|SORBS2', 'nc|ENSG00000154556|O94875-11|SORBS2', 'ENSG00000154556|ENST00000695409|SORBS2'] 98874 4776 SIVREKLYK True NCI_RA007_Epitope_Rep5 1134.6760936273397 1134.6744449037901 25.054 3 -0.03558221025860621 0.014643697794071698 0.9438714419765777 ['ENSG00000125482|ENST00000334270|TTF1'] 96581 9238 SELRSVLV True H1975_Epitope_Rep2 901.5232813840499 901.52218993586 40.49 2 -0.03558474616428271 0.014643697794071698 0.9438714419765777 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'PKMYT1|p.F483Lfs*14|1|0.54|ENSG00000127564|chr16:2973004-2973004|A/-|frameshift_variant', 'ENSG00000127564|ENST00000262300|PKMYT1', 'ENST00000575981.1_1_16:3022956-3024767:-|nuORF'] 2208 5762 AENPKLISA True NCI_RA007_Epitope_Rep5 941.5181960036099 941.51708993586 28.85 2 -0.03560905798122845 0.014643697794071698 0.9438714419765777 ['ENSG00000163214|ENST00000457308|DHX57', 'ENST00000497514.2_1_2:39033679-39046075:-|nuORF'] 6551 12407 APVNVTTEV True PC9_epitope_Rep4 928.4865615221601 928.48546993586 55.528 2 -0.03561174333737422 0.014643697794071698 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 107591 16796 TAFPEASFL True H1975_Epitope_Rep2 981.4807478657299 981.4801949679301 69.854 1 -0.035637740795441866 0.014681382757184506 0.9438714419765777 ['ENSG00000171206|ENST00000643721|TRIM8'] 25258 8274 FEDESPPAP True H1975_Epitope_Rep3 987.4185415319898 987.41744993586 36.807 2 -0.03565348327486379 0.014681382757184506 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D'] 54979 20956 LAIGASFTV True PC9_epitope_Rep1 877.49091862661 877.49037496793 85.43 1 -0.03565424425949638 0.014681382757184506 0.9438714419765777 ['nc|ENSG00000104635|Q15043-2|SLC39A14', 'nc|ENSG00000104635|Q15043-3|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 124445 16739 VLERQRRNELK True NCI_RA007_Epitope_Rep2 1439.8320937581095 1439.83098993586 69.844 2 -0.03568140079255771 0.014681382757184506 0.9438714419765777 ['nc|ENSG00000136997|P01106-1|MYC', 'nc|ENSG00000136997|P01106-3|MYC', 'ENSG00000136997|ENST00000621592|MYC'] 37658 13652 HAGVISVL True PC9_epitope_Rep2 794.46503823194 794.46448496793 57.805 1 -0.035687693552898095 0.014681382757184506 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 88595 19538 RALLLGAL True PC9_epitope_Rep1 825.5436229058099 825.54252993586 79.975 2 -0.03569231548454622 0.014681382757184506 0.9438714419765777 ['ENST00000525095.2_1_11:134094621-134094950:+|nuORF', 'ENST00000281187.9_1_11:134094584-134094950:+|nuORF'] 70796 10240 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 44.394 2 -0.03569524129518454 0.014681382757184506 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 109491 4772 TGYGMPRQ True NCI_RA007_Epitope_Rep5 908.4174364165199 908.41632993586 25.039 2 -0.035702183192843275 0.014681382757184506 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159888592-159888742:-|nuORF', 'ENSG00000144834|ENST00000478951|TAGLN3'] 20209 12992 ENTLQLVRNI True H1975_Epitope_Rep1 1198.6669854956199 1198.6658899358602 55.054 2 -0.03574059635753345 0.014681382757184506 0.9438714419765777 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 35574 12898 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 61.143 2 -0.03574807108981362 0.014681382757184506 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 28012 11680 FQYEEEVKA True PC9_epitope_Rep5 1141.5291546101298 1141.52804993586 49.923 2 -0.03578756281093104 0.014681382757184506 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 78418 6687 PAYHSSLMD True NCI_RA007_Epitope_Rep4 1019.43823143075 1019.43712993586 32.346 2 -0.0358116102317136 0.014681382757184506 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000548878.6_1_12:110874955-110888065:-|nuORF', 'ENST00000471641.1_1_12:110880867-110888065:-|nuORF', 'ARPC3|p.R25Qfs*16|1|0.26|ENSG00000111229|chr12:110445479-110445489|GACTTCTGATA/-|frameshift_variant', 'ENST00000543613.1_1_11:73633096-73633237:-|nuORF', 'ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 31541 13329 GEFGGFSEV True NCI_RA007_Epitope_Rep4 927.3974121645899 927.39686496793 58.423 1 -0.03582330356340439 0.014681382757184506 0.9438714419765777 ['nc|ENSG00000119844|Q6ULP2-7|AFTPH', 'ENST00000498706.5_1_2:64778608-64806757:+|nuORF', 'nc|ENSG00000119844|Q6ULP2-8|AFTPH', 'nc|ENSG00000119844|Q6ULP2-6|AFTPH', 'ENSG00000119844|ENST00000409933|AFTPH', 'nc|ENSG00000119844|Q6ULP2-9|AFTPH'] 130236 17079 VTSNSGILGV True PC9_epitope_Rep5 945.51311062317 945.51200993586 70.713 2 -0.03587000546305658 0.014701901251535787 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 48649 9113 KEKSIFLVA True NCI_RA007_Epitope_Rep4 1033.6171817688898 1033.6160899358601 41.892 2 -0.03588547572854677 0.014719353764157228 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 112913 12060 TPQPPLLKA True PC9_epitope_Rep3 963.5753169569099 963.57420993586 51.43 2 -0.03592872019456951 0.014719353764157228 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 133811 7665 WLSQCFDAK True H1975_Epitope_Rep1 1096.50116604048 1096.5000699358602 34.455 2 -0.035934940749321374 0.014719353764157228 0.9438714419765777 ['ENSG00000154127|ENST00000284273|UBASH3B', 'ENST00000530578.1_1_11:122665536-122667965:+|nuORF'] 67440 5145 LTEAPLNPK True NCI_RA007_Epitope_Rep3 981.5494961318899 981.54838993586 27.231 2 -0.03593898260765157 0.014719353764157228 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000446382.2_1_9:6834760-6835018:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENST00000403258.1_1_6:88986231-88986483:-|nuORF', 'ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 54920 13116 LAGPVVEI True H1975_Epitope_Rep2 796.4694549060399 796.46890496793 55.572 1 -0.035940249917898744 0.014719353764157228 0.9438714419765777 ['OR6N1|p.F168Ifs*13|1|0.18|ENSG00000197403|chr1:158766182-158766183|-/G|frameshift_variant', 'ENSG00000197403|ENST00000641846|OR6N1'] 97629 7444 SHANSAVVL True PC9_epitope_Rep3 896.47158016436 896.47048993586 33.639 2 -0.03594802113224198 0.014719353764157228 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 70871 6461 M[Oxidation]EGPTPVSA True H1975_Epitope_Rep2 903.4007836733099 903.40023496793 29.77 1 -0.035961079845694514 0.014719353764157228 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 75818 18942 NRDELELEL True PC9_epitope_Rep5 1129.5615173675699 1129.56097496793 77.885 1 -0.035977231017848214 0.014719353764157228 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF'] 102649 16324 SQDFPGSNL True PC9_epitope_Rep5 963.42977492203 963.42922496793 67.786 1 -0.036002417261406294 0.014719353764157228 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 32963 16795 GISQPIWL True H1975_Epitope_Rep2 912.5069030439199 912.5063549679301 69.85 1 -0.03600602007957533 0.014719353764157228 0.9438714419765777 ['ENSG00000163344|ENST00000368467|PMVK'] 56497 4660 LDTNADKQLS True NCI_RA007_Epitope_Rep5 1103.54586730343 1103.5447699358601 24.609 2 -0.0360449879047694 0.014719353764157228 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 115341 11874 TVEDPVTVEY True H1975_Epitope_Rep2 1150.5393849406598 1150.5382899358601 50.751 2 -0.036066695364408305 0.014737411794092546 0.9438714419765777 ['nc|ENSG00000101182|O14818-4|PSMA7', 'ENST00000484488.5_1_20:60714188-60718428:-|nuORF', 'ENSG00000101182|ENST00000370873|PSMA7', 'nc|ENSG00000101182|O14818-2|PSMA7', 'nc|ENSG00000154611|Q8TAA3-2|PSMA8', 'ENSG00000154611|ENST00000415576|PSMA8', 'nc|ENSG00000154611|Q8TAA3|PSMA8'] 107717 17590 TALLKIEGV True PC9_epitope_Rep5 942.57498260374 942.57388993586 72.669 2 -0.03610133439915288 0.014737411794092546 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 47690 20921 IYPTTYVQF True PC9_epitope_Rep2 1130.56481184286 1130.56427496793 85.918 1 -0.036115280901095066 0.014737411794092546 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 75802 8320 NRAVVGVVA True PC9_epitope_Rep3 883.5239500903898 883.52284993586 36.975 2 -0.03611628561829363 0.014737411794092546 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 40117 8965 HRDLPIKL True PC9_epitope_Rep4 990.5974493838199 990.59634993586 42.033 2 -0.036145360693227394 0.014737411794092546 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 101688 7872 SPGADAELP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 35.226 2 -0.03616651459666325 0.014737411794092546 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 62142 18604 LLPEEWDEI True PC9_epitope_Rep2 1142.54955570154 1142.5484499358602 76.913 2 -0.03618337150301833 0.014737411794092546 0.9438714419765777 ['nc|ENSG00000151812|A4IF30-2|SLC35F4', 'ENSG00000151812|ENST00000556826|SLC35F4', 'nc|ENSG00000151812|A4IF30|SLC35F4'] 40244 11498 HRIPEPEAAVL True PC9_epitope_Rep4 1230.67207087606 1230.67042490379 51.988 3 -0.03622720163206136 0.014737411794092546 0.9438714419765777 ['ENSG00000101255|ENST00000217233|TRIB3'] 40332 6008 HRSDALQL True PC9_epitope_Rep2 938.4933782380999 938.49228993586 28.499 2 -0.03622933689035903 0.014737411794092546 0.9438714419765777 ['nc|ENSG00000122861|P00749-2|PLAU', 'ENSG00000122861|ENST00000372764|PLAU'] 6265 5562 APRPPTAAP True PC9_epitope_Rep5 876.4817509252399 876.48064993586 26.399 2 -0.036248214466707264 0.014757305803013904 0.9438714419765777 ['nc|ENSG00000184939|Q8TF47-3|ZFP90', 'ENSG00000184939|ENST00000563169|ZFP90'] 20214 19711 ENTLQLVRNI True PC9_epitope_Rep3 1198.6669854956199 1198.6658899358602 81.048 2 -0.03625330574168656 0.014757305803013904 0.9438714419765777 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 128696 19153 VSNPVDILTYV True H1975_Epitope_Rep1 1218.64960409598 1218.6485099358601 79.818 2 -0.03628526478411951 0.014757305803013904 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 89495 4435 REQPPTGGNLA True H1975_Epitope_Rep2 1138.57308511078 1138.57198993586 22.171 2 -0.03629399210580096 0.014797394326624904 0.9438714419765777 ['ENST00000308660.5_1_5:126253889-126366245:-|nuORF'] 126868 15049 VPTNIIAA True PC9_epitope_Rep1 797.4647038787699 797.46360993586 62.703 2 -0.036302313891248744 0.014797394326624904 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 77353 14819 NYLKDGPYI True PC9_epitope_Rep4 1081.54441075145 1081.5433099358602 64.938 2 -0.03630335294013905 0.014797394326624904 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 103379 19907 SQVQQLISL True PC9_epitope_Rep4 1014.5709598524599 1014.56986993586 84.707 2 -0.03634476862881145 0.014797394326624904 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR'] 17883 5844 EIDKEEHLY True H1975_Epitope_Rep3 1174.5506183307 1174.5489749037902 27.493 3 -0.036358831312248034 0.014797394326624904 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51640434-51640983:+|nuORF', 'ENST00000479281.5_1_X:51931784-51932886:+|nuORF', 'ENST00000470594.5_1_X:51805328-51809606:-|nuORF', 'nc|ENSG00000187243|Q96JG8-2|MAGED4', 'ENSG00000187243|ENST00000335504|MAGED4B', 'ENSG00000154545|ENST00000471932|MAGED4', 'nc|ENSG00000187243|Q96JG8-4|MAGED4'] 2843 7456 AEVRVIAPP True NCI_RA007_Epitope_Rep3 950.5549158654998 950.55380993586 36.449 2 -0.03639206733880063 0.014815739642507856 0.9438714419765777 ['nc|ENSG00000172731|Q8TCA0-3|LRRC20', 'nc|ENSG00000172731|Q8TCA0-2|LRRC20', 'ENSG00000172731|ENST00000446961|LRRC20'] 8589 18927 AVAELNYGL True PC9_epitope_Rep4 948.4916469026 948.49109496793 80.889 1 -0.036394231654652165 0.014815739642507856 0.9438714419765777 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 131758 10582 VYADQPHIF True NCI_RA007_Epitope_Rep4 1088.52909504048 1088.5279899358602 47.547 2 -0.03640167000926832 0.014815739642507856 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 24712 14649 FAVPENSSV True PC9_epitope_Rep2 948.4552613938799 948.45471496793 61.614 1 -0.03641306225950781 0.014815739642507856 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'nc|ENSG00000135018|Q9UMX0-4|UBQLN1'] 85982 18041 QPGEAWKELQV True PC9_epitope_Rep5 1283.65100107831 1283.64990993586 74.411 2 -0.036425146943716166 0.014815739642507856 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 38559 15987 HHFEQMLKL True PC9_epitope_Rep5 1181.6015487880898 1181.59990490379 66.485 3 -0.036432103290282826 0.014815739642507856 0.9438714419765777 ['nc|ENSG00000113569|O75694-2|NUP155', 'ENSG00000113569|ENST00000231498|NUP155'] 2882 5446 AEYRSYVA True H1975_Epitope_Rep2 957.45559574705 957.45448993586 25.975 2 -0.0364565743088384 0.014815739642507856 0.9438714419765777 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.P307Rfs*57|1|0.2|ENSG00000198753|chrX:153767746-153767747|-/G|frameshift_variant'] 3427 10841 AGLAKSIGV True PC9_epitope_Rep5 814.4912529797799 814.49014993586 46.687 2 -0.0365028904359316 0.014815739642507856 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|250|16.96|0.18|6.55|+|ENST00000602997|AKR1C3,AKR1C3', 'ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|317|31.41|0.67|5.55|+|ENST00000380859|AKR1C1,AKR1C1', 'chr10:4963893-4965914|317|27.99|0.97|4.85|+|ENST00000380859|AKR1C1,AKR1C1'] 16821 20019 EFNSTPAVF True PC9_epitope_Rep1 1010.4709114580198 1010.4703749679301 81.829 1 -0.036548336520990925 0.014836239543884473 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 76848 21344 NVIDNLIVA True PC9_epitope_Rep2 969.5494961318899 969.54838993586 87.566 2 -0.03657021348450318 0.014852411956815676 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 38576 8538 HHGGPLTL True PC9_epitope_Rep1 830.4398861132601 830.43878993586 37.68 2 -0.03660138043800495 0.014852411956815676 0.9438714419765777 ['ENST00000322310.9_1_9:140084508-140084799:+|nuORF'] 126008 8875 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.4914349679301 44.076 1 -0.036603221798271905 0.014852411956815676 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 72478 16645 MVADKFTEL True PC9_epitope_Rep5 1052.52123277872 1052.52012993586 69.03 2 -0.036628216051344226 0.014852411956815676 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 82206 14724 PTGRSQVFSV True PC9_epitope_Rep2 1076.56145779792 1076.56036993586 61.903 2 -0.03671809787044515 0.014852411956815676 0.9438714419765777 ['ENST00000480631.5_1_3:122920951-122928060:+|nuORF'] 48028 19306 KALDGFVMV True PC9_epitope_Rep2 978.5208388558999 978.51974993586 79.635 2 -0.036721120796872106 0.014852411956815676 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 5156 20822 ALPDDLVEV True PC9_epitope_Rep2 969.5018772331299 969.50078993586 85.535 2 -0.03673882750975067 0.014852411956815676 0.9438714419765777 ['ENSG00000120756|ENST00000457734|PLS1'] 28198 10697 FRQQRPLEF True PC9_epitope_Rep2 1219.6461904813898 1219.64455490379 46.46 3 -0.03674672607244571 0.014852411956815676 0.9438714419765777 ['ENSG00000089693|ENST00000203630|MLF2'] 65662 15481 LSGVNYDEM True PC9_epitope_Rep1 1026.4328116971399 1026.43170993586 64.368 2 -0.03678861192085974 0.014852411956815676 0.9438714419765777 ['ENSG00000153975|ENST00000368576|ZUP1'] 105979 8678 SVLIQKQIFK True NCI_RA007_Epitope_Rep4 1202.7386938838997 1202.7370349037901 40.168 3 -0.03680967873945289 0.014852411956815676 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000528833.1_1_11:9431619-9435997:+|nuORF'] 34611 11002 GQIAGSTGL True PC9_epitope_Rep5 802.41848196234 802.41793496793 47.307 1 -0.03682529192756757 0.014852411956815676 0.9438714419765777 ['ENSG00000102243|ENST00000370634|VGLL1'] 976 8202 AEAAVVAVA True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 36.491 1 -0.03689475414233136 0.014852411956815676 0.9438714419765777 ['ENSG00000211450|ENST00000534355|SELENOH'] 105760 20880 SVIDIINGEA True PC9_epitope_Rep2 1029.5342399905699 1029.5331499358601 85.759 2 -0.03690943095576992 0.014852411956815676 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant'] 96038 9294 SEAPESVVV True H1975_Epitope_Rep2 915.45492704071 915.4543749679301 40.708 1 -0.03692096064586831 0.014852411956815676 0.9438714419765777 ['nc|ENSG00000205189|Q96DT7-4|ZBTB10', 'nc|ENSG00000205189|Q96DT7-3|ZBTB10', 'nc|ENSG00000205189|Q96DT7-2|ZBTB10', 'ENSG00000205189|ENST00000455036|ZBTB10'] 52321 10627 KPANVFITA True PC9_epitope_Rep4 959.54401682863 959.54346496793 48.627 1 -0.0369258737451155 0.014852411956815676 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 135864 6070 YEREQVIAA True NCI_RA007_Epitope_Rep4 1077.5454733806098 1077.54436993586 29.965 2 -0.03700304943214341 0.014870738961336078 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 26247 18317 FHYNGTDVSF True PC9_epitope_Rep5 1185.50908787189 1185.50798993586 75.471 2 -0.03702962419112361 0.014870738961336078 0.9438714419765777 ['ENSG00000176624|ENST00000406189|MEX3C'] 75967 16265 NRGQFFTVY True PC9_epitope_Rep4 1130.55089311422 1130.5497899358602 70.516 2 -0.03703156942818824 0.014870738961336078 0.9438714419765777 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000587673.5_1_19:1109158-1109530:-|nuORF'] 5904 10511 APGYSYTAA True PC9_epitope_Rep5 899.4024975450299 899.40140993586 45.418 2 -0.03703578198224071 0.014870738961336078 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS'] 28379 12854 FSDPVYAEAY True H1975_Epitope_Rep1 1160.5026055091198 1160.5015099358602 54.512 2 -0.0370573788153112 0.014870738961336078 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 138167 8215 YQNQEIHNL True PC9_epitope_Rep2 1157.5465360097699 1157.54542993586 36.956 2 -0.03706613208101258 0.014870738961336078 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000456732.2_10:48190054-48195746:+|nuORF'] 40814 6314 HVIHTGEK True NCI_RA007_Epitope_Rep1 919.48756458167 919.48646993586 28.585 2 -0.03707013665231807 0.014870738961336078 0.9438714419765777 ['ZNF460|p.I216V|2|0.31|ENSG00000197714|chr19:57291187-57291187|A/G|missense_variant'] 33832 8394 GLVEAAAVA True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 37.215 1 -0.037094470693138516 0.014870738961336078 0.9438714419765777 ['ENSG00000204366|ENST00000375527|ZBTB12'] 64019 5789 LQDAEIAR True PC9_epitope_Rep5 914.4821448480599 914.48104993586 27.26 2 -0.037115302807506904 0.014890298429863783 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 74256 20447 NIEETLVNI True PC9_epitope_Rep5 1043.54989005471 1043.5487899358602 83.685 2 -0.0371182489154312 0.014890298429863783 0.9438714419765777 ['nc|ENSG00000243660|B1APH4|ZNF487'] 115839 19974 TVMPEDLVEA True PC9_epitope_Rep2 1102.5216267015398 1102.5205299358602 82.231 2 -0.037174908802159234 0.014890298429863783 0.9438714419765777 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118788237-118827866:+|nuORF'] 64289 23512 LQLSLPLFL True PC9_epitope_Rep4 1042.64266824074 1042.6420749679298 98.742 1 -0.03717845103086111 0.014890298429863783 0.9438714419765777 ['ENST00000495882.1_1_7:99764639-99764801:-|nuORF'] 8812 19641 AVFPFQPGSV True PC9_epitope_Rep6 1047.53893144819 1047.5378299358601 88.208 2 -0.03721809514084583 0.014907064742816748 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 70800 10645 M[Oxidation]EENFAVEA True H1975_Epitope_Rep2 1054.4277266971399 1054.42662993586 45.97 2 -0.03723836463280384 0.014907064742816748 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 9929 20632 AYPYNFSNL True PC9_epitope_Rep2 1087.49746055903 1087.49636993586 84.795 2 -0.037240932168410526 0.014907064742816748 0.9438714419765777 ['ENSG00000174282|ENST00000380599|ZBTB4'] 110536 17041 TIREGETLEL True PC9_epitope_Rep1 1159.6084675599898 1159.60736993586 70.374 2 -0.03732961184140908 0.014907064742816748 0.9438714419765777 ['MDGA2|p.R624Efs*5|1|0.16|ENSG00000139915|chr14:46957594-46957594|A/-|frameshift_variant', 'MDGA2|p.G941Efs*2|1|0.22|ENSG00000139915|chr14:46855084-46855085|CC/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2', 'nc|ENSG00000139915|Q7Z553|MDGA2'] 56621 10719 LDYLSSLK True H1975_Epitope_Rep3 937.51204799401 937.51094993586 46.307 2 -0.03734295077649838 0.014907064742816748 0.9438714419765777 ['nc|ENSG00000168003|P08195-5|SLC3A2', 'ENST00000457660.6_1_11:62649366-62653989:+|nuORF', 'ENSG00000168003|ENST00000338663|SLC3A2', 'nc|ENSG00000168003|P08195-3|SLC3A2', 'nc|ENSG00000168003|P08195|SLC3A2', 'nc|ENSG00000168003|P08195-4|SLC3A2', 'ENST00000541649.1_1_11:62649366-62649600:+|nuORF', 'ENST00000546253.5_1_11:62649261-62650084:+|nuORF', 'ENST00000537839.5_1_11:62649261-62650080:+|nuORF'] 46777 20122 IVCTWYCSI True PC9_epitope_Rep2 1086.48782447546 1086.48672993586 82.809 2 -0.03734428732955374 0.014907064742816748 0.9438714419765777 ['nc|ENSG00000139880|Q86UP0-3|CDH24'] 35632 9978 GTLSSWNLK True NCI_RA007_Epitope_Rep2 1004.52909504048 1004.52798993586 43.44 2 -0.037388769105599615 0.014907064742816748 0.9438714419765777 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF', 'ENST00000380319.2_1_X:15782817-15782931:+|nuORF', 'ENST00000435806.2_1_X:15706900-15713817:+|nuORF', 'ENST00000380336.5_1_X:15706900-15715389:+|nuORF'] 8944 14150 AVGPIVQL True NCI_RA007_Epitope_Rep2 795.48543932335 795.48489496793 59.703 1 -0.03739222757435085 0.014907064742816748 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.K134Rfs*14|1|0.17|ENSG00000112531|chr6:163478888-163478888|A/-|frameshift_variant'] 22383 6908 ETERRMDFY True H1975_Epitope_Rep2 1245.54482175761 1245.54316490379 31.492 3 -0.03740853870376604 0.014907064742816748 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 8705 14149 AVDGNTVEL True PC9_epitope_Rep3 916.45017601344 916.44906993586 59.508 2 -0.03742789714483909 0.014907064742816748 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 112573 10266 TPAPHSPWTA True PC9_epitope_Rep2 1063.50869394907 1063.50758993586 44.821 2 -0.03746978870668171 0.014907064742816748 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 17096 9702 EGRLALKL True PC9_epitope_Rep2 898.5600012459399 898.55890993586 42.657 2 -0.03747462193002956 0.014907064742816748 0.9438714419765777 ['ENSG00000129749|ENST00000250699|CHRNA10'] 109982 14671 THSNTIVVSL True PC9_epitope_Rep3 1069.57677350889 1069.57566993586 61.568 2 -0.03750469861746346 0.014907064742816748 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 66964 15377 LSYVIRRLVP True H1975_Epitope_Rep2 1214.7499272739399 1214.7488299358602 64.307 2 -0.03753424356888759 0.014947714184736284 0.9438714419765777 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 42810 18763 IFIRNPRTLF True PC9_epitope_Rep5 1275.74517624667 1275.74353490379 77.182 3 -0.03755855993061299 0.014947714184736284 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 7953 17457 ATDIPCLLY True H1975_Epitope_Rep2 1007.4997690581499 1007.49917496793 72.441 1 -0.037568517970325316 0.014947714184736284 0.9438714419765777 ['ENSG00000135249|ENST00000257700|RINT1', 'ENST00000474123.1_1_7:105190513-105195680:+|nuORF'] 97985 14905 SHSEWVSCV True PC9_epitope_Rep5 1032.43348040348 1032.43238993586 62.336 2 -0.037586030175482094 0.014962904466011347 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000515417.5_1_5:180666387-180668514:-|nuORF'] 66785 16843 LSVGSSVII True H1975_Epitope_Rep2 873.5171333744499 873.51658496793 70.033 1 -0.037588467975611634 0.014962904466011347 0.9438714419765777 ['LGALS13|p.C19S|1|0.13|ENSG00000105198|chr19:39604641-39604641|T/A|missense_variant'] 109828 16460 THLGPLASL True PC9_epitope_Rep2 907.51271670035 907.51160993586 68.555 2 -0.03759697887487021 0.014962904466011347 0.9438714419765777 ['ENSG00000127399|ENST00000359623|LRRC61'] 115570 7079 TVIAKVNNV True PC9_epitope_Rep4 956.5654805492 956.56438993586 34.495 2 -0.037598218625131095 0.014962904466011347 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 8961 16262 AVGVLVAAT True PC9_epitope_Rep2 799.48035394291 799.47980496793 67.793 1 -0.03760462651153533 0.014962904466011347 0.9438714419765777 ['FCN2|p.G11V|1|0.18|ENSG00000160339|chr9:134880853-134880853|G/T|missense_variant'] 24343 21165 FADPDDLPGL True PC9_epitope_Rep2 1058.49204082542 1058.49094993586 86.866 2 -0.03766446472911543 0.014962904466011347 0.9438714419765777 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC', 'NRDC|p.M396Kfs*40|1|0.13|ENSG00000078618|chr1:51825340-51825341|-/TT|frameshift_variant'] 4454 6100 AKAPPTACY True PC9_epitope_Rep5 920.4425885352 920.44148993586 28.452 2 -0.0376693693596355 0.014962904466011347 0.9438714419765777 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB', 'nc|ENSG00000172216|P17676-3|CEBPB'] 119302 16414 VELNIVAGYG True H1975_Epitope_Rep2 1033.5444107514497 1033.5433099358602 68.357 2 -0.03770303199618449 0.014962904466011347 0.9438714419765777 ['ENSG00000110697|ENST00000356404|PITPNM1', 'nc|ENSG00000110697|O00562-2|PITPNM1', 'ENST00000527370.5_1_11:67259506-67263940:-|nuORF'] 57962 8210 LEQQRRYHEEK True NCI_RA007_Epitope_Rep1 1514.7589883875 1514.75788993586 35.934 2 -0.037704767873843886 0.014962904466011347 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF'] 101969 13780 SPMPGTLTA True PC9_epitope_Rep1 873.4266041178901 873.4260549679301 57.851 1 -0.037708941639162774 0.014962904466011347 0.9438714419765777 ['ENSG00000113456|ENST00000382038|RAD1'] 31695 10201 GEIGLGTPP True H1975_Epitope_Rep3 839.43888305375 839.43833496793 44.283 1 -0.037724225778391796 0.014962904466011347 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA'] 137498 20408 YLPPGFLSA True PC9_epitope_Rep4 963.50656869075 963.50546993586 86.646 2 -0.03773735505646366 0.014962904466011347 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 132012 16892 VYGPMKNYL True PC9_epitope_Rep3 1083.5423025764699 1083.54120993586 70.13 2 -0.0377460812543143 0.014962904466011347 0.9438714419765777 ['ENSG00000166825|ENST00000300060|ANPEP'] 56920 7286 LEDRPANLP True H1975_Epitope_Rep3 1023.53490869691 1023.53380993586 33.001 2 -0.03776976857455425 0.014962904466011347 0.9438714419765777 ['nc|ENSG00000132405|Q9P2M4-2|TBC1D14', 'ENSG00000132405|ENST00000409757|TBC1D14'] 17481 9437 EHGPENIVM True PC9_epitope_Rep6 1024.46478053176 1024.4636899358602 46.529 2 -0.03777884084632533 0.014962904466011347 0.9438714419765777 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 94560 9988 RYIPTAAAF True NCI_RA007_Epitope_Rep5 1008.5392658013599 1008.5386749679301 45.061 1 -0.03778753477803137 0.014962904466011347 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 7906 5456 ATATVAALQEK True NCI_RA007_Epitope_Rep3 1101.6029882567298 1101.60188993586 28.471 2 -0.03782616184037653 0.014962904466011347 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 117279 17704 VAAAPTLVS True PC9_epitope_Rep1 827.47526856247 827.47416993586 72.893 2 -0.03782781993095019 0.014962904466011347 0.9438714419765777 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 92965 9604 RRQEAIYEM True PC9_epitope_Rep1 1194.5815416194998 1194.5798849037901 41.797 3 -0.03785008378692492 0.014982752171563942 0.9438714419765777 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000465087.1_1_10:5494419-5494892:+|nuORF'] 110374 21621 TILPAIILV True PC9_epitope_Rep6 951.63685458431 951.6363049679301 96.044 1 -0.037863496148391414 0.014982752171563942 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 108335 3661 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 19.034 2 -0.03786408201107303 0.014982752171563942 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 129491 21417 VTEVELLLY True H1975_Epitope_Rep2 1077.5957776179698 1077.59468993586 88.614 2 -0.037894567337419145 0.015002597402597403 0.9438714419765777 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574', 'ZNF574|p.Q224Sfs*144|1|0.3|ENSG00000105732|chr19:42079275-42079275|C/-|frameshift_variant'] 114214 9554 TRVNPVTL True PC9_epitope_Rep2 898.5236157372199 898.52250993586 42.095 2 -0.037934004967011506 0.015002597402597403 0.9438714419765777 ['nc|ENSG00000278259|Q96H55-4|MYO19', 'ENSG00000278259|ENST00000614623|MYO19', 'nc|ENSG00000278259|Q96H55-2|MYO19', 'nc|ENSG00000278259|Q96H55-3|MYO19'] 113474 4218 TQRPEGTSL True NCI_RA007_Epitope_Rep4 987.49852318819 987.4974299358599 22.536 2 -0.037948083599625614 0.015002597402597403 0.9438714419765777 ['ENST00000569758.1_1_15:75646945-75647372:+|nuORF', 'ENST00000567393.5_1_15:75645991-75647372:+|nuORF', 'ENSG00000140398|ENST00000355059|NEIL1', 'ENST00000561643.5_1_15:75646668-75647372:+|nuORF'] 100127 24566 SLLDELLEV True PC9_epitope_Rep5 1029.55939210925 1029.55828993586 99.608 2 -0.03800418002580056 0.015023064455803516 0.9438714419765777 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1', 'SOAT1|p.R253Pfs*31|1|0.16|ENSG00000057252|chr1:179341284-179341285|-/C|frameshift_variant'] 66994 18083 LTAERVEEL True PC9_epitope_Rep1 1058.5607890915799 1058.5596899358602 74.349 2 -0.03806318090004148 0.015039155813132258 0.9438714419765777 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'ENST00000515254.1_1_5:137506426-137514303:-|nuORF'] 14809 16023 DYAYLREHF True PC9_epitope_Rep2 1212.5563724174797 1212.55471490379 66.886 3 -0.03806604196140789 0.015039155813132258 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000565396.5_1_16:2050390-2052694:-|nuORF'] 72480 14433 MVADKFTEL True PC9_epitope_Rep6 1052.52123277872 1052.52012993586 67.409 2 -0.03809529192308109 0.015039155813132258 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 34712 16819 GQMGSFIRL True PC9_epitope_Rep6 1007.5222358382299 1007.52112993586 77.201 2 -0.038097459949140156 0.015039155813132258 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1'] 4209 11769 AIDQLHLEY True H1975_Epitope_Rep3 1100.5502244078798 1100.54912993586 50.413 2 -0.038113587321569505 0.015039155813132258 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 30264 8579 GAAKDLPGV True PC9_epitope_Rep3 826.4548674710599 826.45376993586 37.95 2 -0.03813043076913861 0.015039155813132258 0.9438714419765777 ['ENSG00000240682|ENST00000393295|ISY1', 'nc|ENSG00000240682|Q9ULR0-2|ISY1', 'nc|ENSG00000240682|Q9ULR0-1|ISY1'] 54938 13157 LAGVSSILGAI True PC9_epitope_Rep6 999.5964463243099 999.59534993586 62.249 2 -0.03814738125292133 0.015039155813132258 0.9438714419765777 ['ENSG00000198804|ENST00000361624|MT-CO1'] 138879 16422 YSDSFPMEL True H1975_Epitope_Rep1 1087.45321278855 1087.4526749679299 68.527 1 -0.03815442539170081 0.015039155813132258 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3'] 13229 7966 DLTREGGSIP True NCI_RA007_Epitope_Rep5 1043.5247379360299 1043.52364993586 37.33 2 -0.03816343112893439 0.015039155813132258 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 38888 15599 HIIENIVAV True PC9_epitope_Rep6 1006.58113061334 1006.58057496793 72.208 1 -0.03816607542169918 0.015039155813132258 0.9438714419765777 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 126043 12373 VPAPSPLSA True PC9_epitope_Rep4 837.45961849833 837.4590749679301 55.399 1 -0.038184198043635736 0.015039155813132258 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 48039 13310 KALKKIRRKIK True NCI_RA007_Epitope_Rep3 1380.9769075169995 1380.97580993586 59.623 2 -0.03819661699298721 0.015039155813132258 0.9438714419765777 ['nc|ENSG00000182158|Q70SY1-2|CREB3L2', 'ENSG00000182158|ENST00000330387|CREB3L2', 'ENST00000330387.10_1_7:137590448-137590511:-|nuORF'] 26371 14904 FIHQHFVEV True PC9_epitope_Rep1 1154.5872786229402 1154.5856249037902 62.149 3 -0.03823896234519181 0.015039155813132258 0.9438714419765777 ['KLHL18|p.S161R|1|0.62|ENSG00000114648|chr3:47330032-47330032|C/A|missense_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 84126 5010 QEQLRPQTP True H1975_Epitope_Rep2 1095.56727145435 1095.5661699358602 24.354 2 -0.038239864781582276 0.015039155813132258 0.9438714419765777 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3'] 77398 17727 NYLSTMKNF True PC9_epitope_Rep3 1116.52738078832 1116.5262899358602 73.383 2 -0.03824795332256707 0.015039155813132258 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 73995 7654 NHQGTYVL True PC9_epitope_Rep2 930.4559301002199 930.45482993586 34.811 2 -0.038256825506151754 0.015053049021032742 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 27042 6691 FLNEDISK True NCI_RA007_Epitope_Rep5 964.48656152216 964.48546993586 32.408 2 -0.03827300738068837 0.015053049021032742 0.9438714419765777 ['MYH15|p.H1065Pfs*7|1|0.16|ENSG00000144821|chr3:108437641-108437641|T/-|frameshift_variant', 'ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF'] 38846 11307 HIGDAVVI True PC9_epitope_Rep4 822.4599528515 822.45884993586 51.27 2 -0.038274695058040493 0.015053049021032742 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 29003 19700 FTIGEAITSA True PC9_epitope_Rep4 1008.5127762699999 1008.51227496793 83.898 1 -0.038279655571768184 0.015053049021032742 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 5981 16629 APLAIPSAA True PC9_epitope_Rep3 809.46470387877 809.46360993586 69.099 2 -0.0383398011301385 0.015053049021032742 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 32633 15422 GHFPSPIRL True PC9_epitope_Rep1 1022.5661492555399 1022.56504993586 64.14 2 -0.03833994562521368 0.015053049021032742 0.9438714419765777 ['ENSG00000062822|ENST00000440232|POLD1'] 24783 16971 FAYGYIEDL True H1975_Epitope_Rep2 1089.50187723313 1089.50137496793 70.525 1 -0.038352298451306575 0.015053049021032742 0.9438714419765777 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 2634 9765 AESPSWTP True H1975_Epitope_Rep3 873.38684748089 873.3862949679301 42.585 1 -0.038357605902794974 0.015053049021032742 0.9438714419765777 ['ENSG00000085840|ENST00000371568|ORC1'] 108540 14135 TEGEPPFLP True H1975_Epitope_Rep1 985.4756624852898 985.47511496793 59.542 1 -0.03837084625797736 0.015053049021032742 0.9438714419765777 ['ENSG00000241058|ENST00000377304|NSUN6'] 2268 7029 AEPGALASA True H1975_Epitope_Rep2 785.39193286133 785.3913849679301 31.963 1 -0.03838897594773144 0.015053049021032742 0.9438714419765777 ['ENST00000304771.7_1_11:75378785-75379403:-|nuORF'] 103771 16105 SRFPEALRL True PC9_epitope_Rep5 1087.61382772395 1087.6127299358602 66.938 2 -0.038401557168038974 0.015053049021032742 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 37635 13707 HACGVIATI True PC9_epitope_Rep5 883.4585729525099 883.45746993586 57.751 2 -0.03841316638214837 0.015053049021032742 0.9438714419765777 ['ENSG00000183726|ENST00000374358|TMEM50A', 'ENST00000480937.5_1_1:25666968-25687193:+|nuORF'] 59783 5818 LHAAEQESL True PC9_epitope_Rep4 996.4876241513201 996.48652993586 29.238 2 -0.038435337542148486 0.015053049021032742 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000518168.5_1_5:179228470-179228931:-|nuORF', 'ENST00000520134.1_1_5:179228412-179228937:-|nuORF'] 53086 4393 KSDSGKPYYY True H1975_Epitope_Rep2 1206.55570371114 1206.55405490379 22.008 3 -0.03843910964404738 0.015053049021032742 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENST00000467114.2_1_2:153535806-153549567:-|nuORF'] 70368 19057 LYQDGVFKF True PC9_epitope_Rep4 1115.56514619603 1115.56404993586 81.393 2 -0.038450488387141366 0.015053049021032742 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 105135 10844 STLRALETV True PC9_epitope_Rep4 988.55530978832 988.55420993586 49.471 2 -0.038474966296614205 0.015053049021032742 0.9438714419765777 ['nc|ENSG00000056586|Q9HBD1-6|RC3H2', 'nc|ENSG00000056586|Q9HBD1-4|RC3H2', 'ENSG00000056586|ENST00000357244|RC3H2'] 135273 22734 YAYPYIIDF True PC9_epitope_Rep4 1163.5539128059897 1163.55280993586 95.664 2 -0.038496047664364236 0.015053049021032742 0.9438714419765777 ['nc|ENSG00000170456|Q6ZUT9-3|DENND5B'] 102305 6288 SPVFRTGSE True PC9_epitope_Rep4 978.4770594676199 978.47596993586 31.246 2 -0.0385588422420004 0.015053049021032742 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 39746 16327 HPYLFPVA True PC9_epitope_Rep6 942.4963383602199 942.49524993586 75.171 2 -0.038561150264784905 0.015053049021032742 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 107930 10675 TAVTVNQSL True PC9_epitope_Rep6 931.4974605590301 931.49636993586 51.878 2 -0.03857298922631793 0.015053049021032742 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 126450 12873 VPLRFPAGSAA True PC9_epitope_Rep4 1084.6029286870798 1084.60182993586 57.39 2 -0.03859466026525259 0.015053049021032742 0.9438714419765777 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 23049 17874 EVKRGDEIAL True PC9_epitope_Rep4 1128.6138872935999 1128.61278993586 76.791 2 -0.038632576850828784 0.015053049021032742 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 101099 18582 SLVAVELEKV True PC9_epitope_Rep2 1085.63322575585 1085.6321299358601 76.828 2 -0.03873162824758143 0.015091441263778465 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4'] 1252 6048 AEDPAPHYP True H1975_Epitope_Rep3 995.43486030247 995.43376993586 28.277 2 -0.03875083133470609 0.015091441263778465 0.9438714419765777 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5'] 67571 5142 LTEREGALKY True H1975_Epitope_Rep2 1178.6295373577398 1178.62789490379 24.856 3 -0.038789854479074445 0.015091441263778465 0.9438714419765777 ['nc|ENSG00000105963|O75689-3|ADAP1', 'ENSG00000105963|ENST00000265846|ADAP1', 'nc|ENSG00000105963|O75689-2|ADAP1', 'ENST00000478000.5_1_7:938560-944975:-|nuORF', 'ENST00000481406.1_1_7:943651-944759:-|nuORF'] 40279 12111 HRNSMKVFL True PC9_epitope_Rep5 1130.60188314126 1130.6002349037901 51.576 3 -0.038791388342759754 0.015091441263778465 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B'] 82415 16440 PVAPAVPTV True PC9_epitope_Rep5 849.49600400705 849.49490993586 68.234 2 -0.03879544172762842 0.015091441263778465 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 114972 6988 TTISKVSQV True PC9_epitope_Rep1 961.5444107514498 961.54330993586 31.684 2 -0.03882098594431018 0.015091441263778465 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 65979 14654 LSLRWVSP True PC9_epitope_Rep5 956.5443511817999 956.54324993586 61.369 2 -0.038822283547763424 0.015091441263778465 0.9438714419765777 ['CRLF1|p.V255L|1|0.42|ENSG00000006016|chr19:18596984-18596984|C/A|missense_variant'] 27908 21975 FQLPIRFNL True PC9_epitope_Rep3 1146.65496425994 1146.65386993586 89.828 2 -0.03883925631729774 0.015091441263778465 0.9438714419765777 ['nc|ENSG00000185418|A2RTX5-2|TARS3', 'ENSG00000185418|ENST00000335968|TARS3', 'ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000509410.1_1_5:33461160-33466106:+|nuORF'] 124208 19197 VLAPLPLHGV True PC9_epitope_Rep3 1014.6226015025001 1014.62150993586 79.059 2 -0.03886645217121773 0.015091441263778465 0.9438714419765777 ['RNF130|p.N172Tfs*6|1|0.34|ENSG00000113269|chr5:180013239-180013239|T/-|frameshift_variant', 'nc|ENSG00000113269|Q86XS8-2|RNF130', 'ENSG00000113269|ENST00000521389|RNF130'] 34884 7786 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 34.942 2 -0.038880550928595825 0.015091441263778465 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 82131 21822 PTDFLVLIN True PC9_epitope_Rep1 1030.5698972233 1030.5688099358601 88.747 2 -0.0388972324870084 0.015109376945747375 0.9438714419765777 ['ENST00000503686.5_1_5:77806061-77806139:-|nuORF'] 25370 7251 FEIATKEDP True H1975_Epitope_Rep2 1048.5076908895599 1048.5065899358601 32.825 2 -0.03891136382188077 0.015109376945747375 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 72810 18142 NAIGVLQQC True PC9_epitope_Rep5 944.4749512926401 944.47384993586 74.793 2 -0.03897307406917089 0.015109376945747375 0.9438714419765777 ['ENSG00000152944|ENST00000282892|MED21'] 101687 7776 SPGADAELP True H1975_Epitope_Rep2 855.3974121645899 855.39630993586 34.857 2 -0.03898269438355498 0.015109376945747375 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 39716 13781 HPVHPFLAV True PC9_epitope_Rep5 1015.56033559911 1015.55922993586 58.028 2 -0.038982720316150916 0.015109376945747375 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 84273 12606 QEYFGSLAA True H1975_Epitope_Rep2 984.4552613938797 984.45416993586 53.586 2 -0.03898315347993743 0.015109376945747375 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 70485 21289 LYSQLVEAL True PC9_epitope_Rep2 1034.5648118428599 1034.56370993586 87.351 2 -0.038990545203032856 0.015109376945747375 0.9438714419765777 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 5659 9510 APAKSLVGQVA True PC9_epitope_Rep5 1039.6025943339098 1039.6014899358602 41.539 2 -0.03900124305895202 0.015109376945747375 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 103582 14431 SRDGMNIVL True PC9_epitope_Rep4 1003.5120650773499 1003.5114749679301 63.417 1 -0.03901250982364481 0.015109376945747375 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 37965 7368 HEFLHEVPAA True H1975_Epitope_Rep2 1148.56145779792 1148.55982490379 33.281 3 -0.03903812844158727 0.01512981757051242 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 21486 4102 ERQPGAASL True PC9_epitope_Rep6 927.4773938207899 927.47628993586 22.659 2 -0.03906758588422269 0.015150257346837124 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 106705 20778 SYATLLHVL True PC9_epitope_Rep1 1015.5702315764698 1015.56912993586 84.752 2 -0.039114485336103635 0.015170696274774307 0.9438714419765777 ['ENSG00000183840|ENST00000329321|GPR39'] 59675 8313 LGTDEISPR True PC9_epitope_Rep5 986.5032742154599 986.50216993586 36.914 2 -0.03915314078504387 0.015188927852592701 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 29315 12633 FVDPSQDHAL True PC9_epitope_Rep3 1127.52473793603 1127.52364993586 53.616 2 -0.03916626148216058 0.015188927852592701 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 26196 8985 FHSNDGGNVL True PC9_epitope_Rep5 1058.47812209678 1058.4770299358602 39.504 2 -0.03920782050822768 0.015188927852592701 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 35411 17861 GTDGFVINL True PC9_epitope_Rep2 934.47599683846 934.47544496793 74.004 1 -0.039225325545361664 0.015188927852592701 0.9438714419765777 ['ENSG00000100079|ENST00000215886|LGALS2'] 73757 6977 NHAPSVQI True PC9_epitope_Rep4 864.44536541652 864.44426993586 34.081 2 -0.03926942228508688 0.015188927852592701 0.9438714419765777 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000491581.5_1_5:141004689-141007494:-|nuORF'] 124529 14664 VLGAFSDG True PC9_epitope_Rep1 764.37046914076 764.36992496793 61.226 1 -0.039303943548709155 0.015188927852592701 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66N|1|0.32|ENSG00000223609|chr11:5234108-5234108|C/A|missense_variant'] 22808 14457 EVDTFMEAY True H1975_Epitope_Rep2 1103.44812740811 1103.4470299358602 60.765 2 -0.03930612162400928 0.015188927852592701 0.9438714419765777 ['ENST00000357802.6_1_22:42970741-42976277:-|nuORF', 'ENSG00000189306|ENST00000323013|RRP7A'] 79231 8548 PGGGGSLPAG True PC9_epitope_Rep5 768.37661715036 768.37552993586 37.824 2 -0.039311471958282815 0.015188927852592701 0.9438714419765777 ['ENST00000331457.8_1_22:31795578-31795629:+|nuORF'] 70 18728 AAAGVFALL True NCI_RA007_Epitope_Rep4 831.4854393233499 831.48489496793 81.025 1 -0.03933855237590589 0.015209046581595602 0.9438714419765777 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 115124 15210 TTYEGSITV True PC9_epitope_Rep5 969.46549172441 969.46438993586 63.514 2 -0.03935284445675915 0.015209046581595602 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant', 'MUC16|p.T2806Lfs*14|1|0.17|ENSG00000181143|chr19:8972724-8972724|G/-|frameshift_variant'] 24462 21191 FAIDEVLEKV True PC9_epitope_Rep2 1161.62814037541 1161.6270499358602 86.966 2 -0.03941185493154862 0.015229163640890511 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 39585 12052 HPKYSDMIVA True PC9_epitope_Rep1 1159.56957995347 1159.56848993586 51.217 2 -0.039416878811212745 0.015229163640890511 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 87533 18640 QTIALITYL True H1975_Epitope_Rep2 1034.60119735158 1034.60010993586 77.36 2 -0.039436960314220414 0.015248013609111466 0.9438714419765777 ['nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'SMARCA2|p.M767I|2|0.59|ENSG00000080503|chr9:2081948-2081948|G/A|missense_variant', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant'] 78071 10157 PALRGALL True H1975_Epitope_Rep2 809.5123227775299 809.51122993586 44.069 2 -0.039441742828188096 0.015248013609111466 0.9438714419765777 ['ENST00000262738.7_1_22:46932303-46932903:-|nuORF'] 36758 12123 GVPDKLIQA True PC9_epitope_Rep5 939.5389314481898 939.53782993586 51.62 2 -0.039443805167472 0.015248013609111466 0.9438714419765777 ['nc|ENSG00000067208|O60447|EVI5', 'nc|ENSG00000067208|O60447-2|EVI5', 'ENSG00000067208|ENST00000684568|EVI5'] 90595 9794 RKILAAIIM True NCI_RA007_Epitope_Rep3 1027.65760711223 1027.6565099358602 45.588 2 -0.03945435264064618 0.015248013609111466 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 83836 12619 QEFRFLPPP True NCI_RA007_Epitope_Rep3 1129.5920296502097 1129.59092993586 56.882 2 -0.03948752379277418 0.015248013609111466 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 111524 19980 TLLRLLYEA True PC9_epitope_Rep4 1090.6386454894598 1090.63754993586 84.985 2 -0.03950215335754229 0.015248013609111466 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 37969 7421 HEFLHEVPAA True H1975_Epitope_Rep3 1148.56145779792 1148.55982490379 33.523 3 -0.0395199708174213 0.015267492272906424 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 40360 4521 HRTELETKL True PC9_epitope_Rep2 1125.61422164677 1125.61258490379 22.752 3 -0.039524435573296844 0.015267492272906424 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 45502 12638 ISERQAEVL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 53.614 2 -0.03952727066123233 0.015267492272906424 0.9438714419765777 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 115566 8412 TVIAKVNNV True PC9_epitope_Rep3 956.5654805492 956.56438993586 37.322 2 -0.03955932539499118 0.015267492272906424 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 5674 21372 APALLLIPAA True PC9_epitope_Rep4 948.60080342876 948.60025496793 90.376 1 -0.039567726721853755 0.015286333561487566 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 106706 20391 SYATLLHVL True PC9_epitope_Rep2 1015.5702315764698 1015.56912993586 83.859 2 -0.03958183702923963 0.015286333561487566 0.9438714419765777 ['ENSG00000183840|ENST00000329321|GPR39'] 131403 7959 VVTGGVQSV True PC9_epitope_Rep6 844.4654321547599 844.46432993586 40.068 2 -0.03961023487479302 0.015286333561487566 0.9438714419765777 ['nc|ENSG00000105355|O60664-4|PLIN3', 'nc|ENSG00000105355|O60664-3|PLIN3', 'ENSG00000105355|ENST00000221957|PLIN3'] 78034 6458 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 29.646 2 -0.03962412040845913 0.015286333561487566 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 128779 5970 VSQVGKEL True PC9_epitope_Rep5 858.4810822188998 858.47998993586 27.959 2 -0.03964006766424774 0.015286333561487566 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 125108 16976 VLPGVDALSNI True NCI_RA007_Epitope_Rep2 1096.61282466444 1096.61227496793 70.769 1 -0.039669775793772934 0.015286333561487566 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 133231 8087 WEEAGPPSA True H1975_Epitope_Rep1 942.4083112014598 942.40720993586 36.051 2 -0.0397457502342902 0.015302631306114832 0.9438714419765777 ['ENSG00000101191|ENST00000395343|DIDO1'] 17982 13902 EIGPFQLEP True H1975_Epitope_Rep2 1028.5178616504397 1028.51676993586 58.621 2 -0.03974847528542852 0.015302631306114832 0.9438714419765777 ['ENSG00000131381|ENST00000253699|RBSN'] 125979 10260 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.4914349679301 44.348 1 -0.03981122632833633 0.015302631306114832 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 2159 14982 AEMEEPPLLP True H1975_Epitope_Rep2 1124.5423621461198 1124.54126993586 62.779 2 -0.039819200642346675 0.015302631306114832 0.9438714419765777 ['ENSG00000087053|ENST00000346299|MTMR2', 'ENST00000485740.5_1_11:95598759-95621397:-|nuORF'] 5696 21464 APAPVFFVT True PC9_epitope_Rep5 947.5116540711899 947.51054993586 87.6 2 -0.03987008665864394 0.015302631306114832 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'nc|ENSG00000108846|O15438-5|ABCC3', 'nc|ENSG00000108846|O15438-3|ABCC3'] 69924 19861 LYDIVFKHF True PC9_epitope_Rep5 1180.6280808057602 1180.62643490379 81.445 3 -0.03988635721536161 0.015302631306114832 0.9438714419765777 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 117767 9167 VALLASRNL True H1975_Epitope_Rep3 955.58146496651 955.58036993586 40.251 2 -0.03989729430838355 0.015302631306114832 0.9438714419765777 ['nc|ENSG00000157992|Q53RY4-2|KRTCAP3', 'ENSG00000157992|ENST00000288873|KRTCAP3'] 118652 9181 VEAPPVVTA True H1975_Epitope_Rep3 881.4858332461699 881.48528496793 40.305 1 -0.03991005082055771 0.015302631306114832 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 107237 10748 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59198993586 46.23 2 -0.03993761246162256 0.015302631306114832 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 61264 12654 LLDSKVPSV True PC9_epitope_Rep4 956.55424715916 956.55314993586 56.513 2 -0.039942894881897235 0.015302631306114832 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 79275 7459 PGHLQEGFG True PC9_epitope_Rep2 940.4402800360799 940.43918993586 34.065 2 -0.03997559752367211 0.015302631306114832 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 634 8216 AATAVTQAL True NCI_RA007_Epitope_Rep3 844.4654321547599 844.46432993586 39.451 2 -0.03998848066025554 0.015302631306114832 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'TLN1|p.N779H|1|0.37|ENSG00000137076|chr9:35717269-35717269|T/G|missense_variant'] 40123 4679 HRDNAGYTAL True PC9_epitope_Rep4 1116.5312202987998 1116.53012993586 24.531 2 -0.04001432615302653 0.015302631306114832 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 105372 6669 STYRDFQQA True PC9_epitope_Rep4 1114.50433684462 1114.5032299358602 32.827 2 -0.04005794034434347 0.015302631306114832 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 66974 20799 LTAAATLSV True PC9_epitope_Rep1 845.48583324617 845.48472993586 84.829 2 -0.040095404753915515 0.015343783694119598 0.9438714419765777 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 137480 20483 YLPESSFIGA True PC9_epitope_Rep5 1082.52842633414 1082.52732993586 83.827 2 -0.04010774407127434 0.015363881401617251 0.9438714419765777 ['ENSG00000188352|ENST00000338382|FOCAD', 'FOCAD|p.A1367S|1|0.67|ENSG00000188352|chr9:20953032-20953032|G/T|missense_variant'] 31420 5932 GEDIRKQLP True H1975_Epitope_Rep3 1054.5771078620598 1054.5760099358602 27.826 2 -0.040142213418606784 0.015363881401617251 0.9438714419765777 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7674005-7689702:+|nuORF'] 97404 10947 SGFEGMFTK True NCI_RA007_Epitope_Rep5 1002.4480678384599 1002.44696993586 48.746 2 -0.04017826001339893 0.015402475175687722 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2'] 66815 20537 LSVPGLVSV True PC9_epitope_Rep4 869.52221875489 869.52167496793 87.146 1 -0.04017970171516464 0.015402475175687722 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 91947 7817 RPPLNPVSA True PC9_epitope_Rep2 949.53451477409 949.53340993586 35.436 2 -0.04018903331097709 0.015402475175687722 0.9438714419765777 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'nc|ENSG00000134278|Q08AE8-4|SPIRE1', 'SPIRE1|p.G591Rfs*25|1|0.26|ENSG00000134278|chr18:12454351-12454352|-/T|frameshift_variant'] 13227 7759 DLTREGGSIP True NCI_RA007_Epitope_Rep3 1043.5247379360299 1043.52364993586 37.641 2 -0.04018991131675549 0.015402475175687722 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 26341 12428 FIFSDTHEL True NCI_RA007_Epitope_Rep3 1107.52367530687 1107.52256993586 56.1 2 -0.04021657147056892 0.015402475175687722 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 72002 11986 MQDPNFHTM True PC9_epitope_Rep5 1119.4477505686302 1119.44664993586 51.1 2 -0.04023793972751494 0.015402475175687722 0.9438714419765777 ['ENSG00000140396|ENST00000452400|NCOA2', 'ENST00000518287.6_1_8:71025838-71050550:-|nuORF'] 46385 22511 ITIEDFYSV True PC9_epitope_Rep1 1085.52809198097 1085.52698993586 91.39 2 -0.040241084605213 0.015402475175687722 0.9438714419765777 ['ENSG00000162402|ENST00000294383|USP24'] 114462 4661 TSERTVLRY True H1975_Epitope_Rep2 1123.5985715826298 1123.59691490379 23.025 3 -0.040247820107630596 0.015402475175687722 0.9438714419765777 ['ENSG00000204560|ENST00000376442|DHX16'] 24782 16840 FAYGYIEDL True H1975_Epitope_Rep1 1089.50187723313 1089.50137496793 70.185 1 -0.04024868038604609 0.015402475175687722 0.9438714419765777 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 35202 18040 GSFGSNFVSA True PC9_epitope_Rep5 971.4348603024699 971.43376993586 74.406 2 -0.040255161764039996 0.015419369546745144 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 125612 7159 VMDDGTNEY True H1975_Epitope_Rep2 1042.39134080798 1042.39077496793 32.471 1 -0.04026915801577708 0.015419369546745144 0.9438714419765777 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 47599 19392 IYNNIKNFVRF True PC9_epitope_Rep5 1426.7721192705 1426.77046490379 79.638 3 -0.040286951039668985 0.015419369546745144 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ENST00000510774.1_1_3:130699433-130714956:+|nuORF'] 11602 7227 DHADVSNQL True PC9_epitope_Rep5 997.4464876153302 997.44538993586 32.763 2 -0.04031038507997734 0.015419369546745144 0.9438714419765777 ['ENSG00000147416|ENST00000276390|ATP6V1B2'] 21633 7273 ERTIHTDVL True PC9_epitope_Rep2 1082.57202248162 1082.57092993586 33.363 2 -0.04032815620343215 0.015419369546745144 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8', 'ENST00000587044.1_1_17:41568567-41594747:+|nuORF', 'ENSG00000005100|ENST00000225296|DHX33', 'nc|ENSG00000005100|Q9H6R0-2|DHX33'] 84279 12306 QEYFGSLAA True NCI_RA007_Epitope_Rep3 984.4552613938797 984.45416993586 55.582 2 -0.04035466943494706 0.015419369546745144 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 17350 12355 EHDSQIVQI True PC9_epitope_Rep1 1067.5247379360299 1067.52364993586 52.38 2 -0.04038019593552066 0.015419369546745144 0.9438714419765777 ['RC3H1|p.P1010Tfs*14|1|0.12|ENSG00000135870|chr1:173943550-173943551|-/G|frameshift_variant', 'nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 134407 11532 WTDGSTLQY True H1975_Epitope_Rep1 1069.47163973401 1069.47107496793 49.341 1 -0.04040717077671063 0.015419369546745144 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 34089 11015 GPAAAFTAA True PC9_epitope_Rep4 775.38645355807 775.3859049679301 50.146 1 -0.04040962626305862 0.015419369546745144 0.9438714419765777 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 96208 3563 SEEKPVPAA True H1975_Epitope_Rep1 926.4709114580198 926.46980993586 18.038 2 -0.04042572703045277 0.015419369546745144 0.9438714419765777 ['nc|ENSG00000189159|Q9UK76-3|JPT1', 'ARMC7-HN1|1|fusion', 'ENSG00000189159|ENST00000409753|JPT1'] 45171 17044 IRDPFIHEI True PC9_epitope_Rep3 1138.6134933707801 1138.6118549037901 70.714 3 -0.04042735008930313 0.015419369546745144 0.9438714419765777 ['ENSG00000198932|ENST00000537097|GPRASP1', 'ENSG00000158301|ENST00000483720|GPRASP2'] 117078 22001 TYQVLAVTF True PC9_epitope_Rep3 1040.5542471591598 1040.5531499358601 89.925 2 -0.040444011415303974 0.015419369546745144 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 42012 7912 IEDSEPHIP True H1975_Epitope_Rep2 1035.48728979815 1035.48618993586 35.381 2 -0.040475474876017166 0.0154592175066313 0.9438714419765777 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'ENST00000359142.7_1_12:89984763-89992387:-|nuORF'] 36669 13438 GVLSDLTK True H1975_Epitope_Rep1 831.47018318203 831.46963496793 56.803 1 -0.04050668406271563 0.0154592175066313 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 95287 6875 SADYIGGSHY True H1975_Epitope_Rep3 1068.4512386426 1068.45014993586 31.403 2 -0.04052205867185335 0.0154592175066313 0.9438714419765777 ['ENSG00000120837|ENST00000240055|NFYB'] 87767 8907 QVGPEAGMQKV True PC9_epitope_Rep1 1142.5753936099 1142.5742899358602 39.1 2 -0.04052910039216924 0.0154592175066313 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 136662 6476 YIDQEELNK True PC9_epitope_Rep6 1150.5506183307 1150.5495299358602 33.557 2 -0.04053820862475494 0.0154592175066313 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 34151 6547 GPEGEAVPAA True H1975_Epitope_Rep2 896.4239612655998 896.42286993586 30.094 2 -0.04057533198311294 0.015478336545036366 0.9438714419765777 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 115780 21116 TVLTQEAIITV True PC9_epitope_Rep5 1186.6809042242598 1186.67980993586 86.287 2 -0.040607424955237226 0.015478336545036366 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'nc|ENSG00000141391|Q96N28-2|PRELID3A', 'ENSG00000141391|ENST00000440960|PRELID3A'] 25274 9820 FEDSSRIIP True H1975_Epitope_Rep2 1062.53457434374 1062.53346993586 42.756 2 -0.04062685952856244 0.015478336545036366 0.9438714419765777 ['ENSG00000009335|ENST00000348165|UBE3C', 'nc|ENSG00000009335|Q15386-2|UBE3C', 'UBE3C|p.M488I|2|0.1|ENSG00000009335|chr7:157207443-157207443|G/A|missense_variant'] 116409 4846 TWKSNDTAASE True H1975_Epitope_Rep3 1208.5309455152799 1208.52984993586 23.766 2 -0.04064848687840294 0.015478336545036366 0.9438714419765777 ['nc|ENSG00000149177|Q12913-3|PTPRJ', 'ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 47692 20217 IYPTTYVQF True PC9_epitope_Rep4 1130.56481184286 1130.56427496793 85.904 1 -0.040678817363752465 0.015478336545036366 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 42806 20534 IFIQNSKLYF True PC9_epitope_Rep1 1271.69140933831 1271.6903099358601 83.797 2 -0.04071005916892657 0.015518813194099122 0.9438714419765777 ['ENSG00000138459|ENST00000492406|SLC35A5'] 94510 9519 RYIDRIHIF True NCI_RA007_Epitope_Rep3 1231.68257599011 1231.68094490379 44.536 3 -0.040751055540030605 0.015518813194099122 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 27409 18026 FNDSTRLIL True PC9_epitope_Rep1 1077.58185888933 1077.5807699358602 74.129 2 -0.040753976281529894 0.015518813194099122 0.9438714419765777 ['ENST00000564794.1_1_16:23700038-23701081:+|nuORF', 'ENST00000562272.5_1_16:23691188-23701381:+|nuORF', 'ENSG00000166851|ENST00000300093|PLK1'] 41070 12299 HYKPTPLYF True PC9_epitope_Rep6 1164.59678067748 1164.59568993586 58.697 2 -0.04078675236644982 0.015538244799867406 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 83658 6977 QEAGSPPVV True H1975_Epitope_Rep2 882.4446967101799 882.44414496793 31.758 1 -0.0407883633907875 0.015538244799867406 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 116607 19140 TYGKIDLGF True PC9_epitope_Rep2 1012.5229470308799 1012.52184993586 78.992 2 -0.04083930081606514 0.015538244799867406 0.9438714419765777 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 120680 13014 VGAPKIPSV True PC9_epitope_Rep5 866.5225531080599 866.52144993586 55.065 2 -0.04084567505727595 0.015538244799867406 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 47038 17543 IVSNPVDILTY True NCI_RA007_Epitope_Rep2 1232.66525416012 1232.66414993586 72.976 2 -0.04085360416205431 0.015556706369756602 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 138903 5400 YSEAVASHY True H1975_Epitope_Rep2 1025.44542498617 1025.4443299358602 25.804 2 -0.04085619872517679 0.015556706369756602 0.9438714419765777 ['nc|ENSG00000147044|O14936-3|CASK', 'nc|ENSG00000147044|O14936-4|CASK', 'nc|ENSG00000147044|O14936-6|CASK', 'nc|ENSG00000147044|O14936-2|CASK', 'ENSG00000147044|ENST00000378163|CASK'] 88064 18831 QVVGGIYGV True PC9_epitope_Rep3 890.4861675993399 890.48506993586 77.657 2 -0.0408655551963935 0.015556706369756602 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 84695 15173 QHFDSVMQL True PC9_epitope_Rep6 1103.5069796969099 1103.50588993586 70.439 2 -0.04091203767534578 0.015556706369756602 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 124980 14198 VLNEYFHNV True PC9_epitope_Rep6 1133.5505587610498 1133.54946993586 66.498 2 -0.040913487527585266 0.015556706369756602 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 4009 12245 AHGVSLVL True PC9_epitope_Rep6 794.46503823194 794.46394993586 58.478 2 -0.04093454498011726 0.015556706369756602 0.9438714419765777 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 8298 12471 ATLGGPAIVHA True PC9_epitope_Rep3 1005.56072952193 1005.55962993586 52.995 2 -0.04093708694338643 0.015556706369756602 0.9438714419765777 ['ENSG00000123983|ENST00000357430|ACSL3'] 6845 16490 AQIEDLQVKL True PC9_epitope_Rep6 1155.6499384491499 1155.6488499358602 75.853 2 -0.04096505871079596 0.015577098351147569 0.9438714419765777 ['ENSG00000157933|ENST00000378536|SKI'] 90542 6958 RKFLDGNEL True NCI_RA007_Epitope_Rep3 1090.5771078620598 1090.5760099358602 34.475 2 -0.040980252588927644 0.01559716641120179 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 34620 19135 GQIEVVPEV True PC9_epitope_Rep2 968.5178616504398 968.51731496793 78.973 1 -0.040988057692393304 0.01559716641120179 0.9438714419765777 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3', 'PHF3|p.Q551Tfs*3|1|0.32|ENSG00000118482|chr6:63685365-63685366|-/A|frameshift_variant'] 115507 18421 TVGLGTAAGV True PC9_epitope_Rep1 844.4654321547599 844.46432993586 75.648 2 -0.04101509481688751 0.015616585891222402 0.9438714419765777 ['ENST00000582193.5_2_17:37356602-37357495:+|nuORF', 'ENST00000579260.5_2_17:37356602-37356950:+|nuORF'] 64089 11105 LQEDPPAGV True PC9_epitope_Rep2 924.4552613938798 924.45416993586 48.038 2 -0.041029541726959315 0.015616585891222402 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 27648 5404 FQDDDQTRV True PC9_epitope_Rep4 1122.4941660837399 1122.4930699358601 27.518 2 -0.0410324418512705 0.015616585891222402 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 82034 6562 PSTSVPAP True H1975_Epitope_Rep2 754.3861192049 754.3855749679301 30.151 1 -0.04105191340733103 0.015616585891222402 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2'] 70491 21307 LYSSEQLLI True PC9_epitope_Rep1 1064.57537652656 1064.5748749679299 86.786 1 -0.041081423664824375 0.015654766835086556 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 35414 18178 GTDGFVINL True PC9_epitope_Rep5 934.47599683846 934.47544496793 74.932 1 -0.04108834806881796 0.015654766835086556 0.9438714419765777 ['ENSG00000100079|ENST00000215886|LGALS2'] 2893 10597 AEYSNTWTP True NCI_RA007_Epitope_Rep3 1067.45598966987 1067.4548899358601 48.732 2 -0.04109173387979698 0.015654766835086556 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 101950 9516 SPLSTPTSA True PC9_epitope_Rep1 859.42871229287 859.42760993586 41.458 2 -0.041107526076975404 0.015654766835086556 0.9438714419765777 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'ENSG00000167775|ENST00000301458|CD320', 'nc|ENSG00000167775|Q9NPF0-2|CD320'] 1227 14860 AEDGFFVPP True H1975_Epitope_Rep3 977.4494477374499 977.4488949679301 62.543 1 -0.04110861931709977 0.015654766835086556 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 135271 23454 YAYPYIIDF True PC9_epitope_Rep2 1163.5539128059897 1163.55280993586 95.686 2 -0.04113280351842651 0.015654766835086556 0.9438714419765777 ['nc|ENSG00000170456|Q6ZUT9-3|DENND5B'] 126598 5728 VPPPPPIAR True NCI_RA007_Epitope_Rep3 942.56508662638 942.56398993586 29.508 2 -0.04114279878385703 0.015654766835086556 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENST00000571636.1_1_16:11336795-11337332:+|nuORF', 'ENST00000457130.2_1_X:143922603-143922738:+|nuORF'] 87903 13896 QVMQGMGVSA True PC9_epitope_Rep3 1006.4575869763398 1006.45707496793 58.529 1 -0.041192839862888665 0.015654766835086556 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 990 6541 AEAEAVAVA True H1975_Epitope_Rep2 829.4181476091699 829.4175949679301 30.07 1 -0.041197045843964386 0.015654766835086556 0.9438714419765777 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 124531 14636 VLGAFSDG True PC9_epitope_Rep3 764.37046914076 764.36992496793 61.429 1 -0.041200316679674324 0.015654766835086556 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66N|1|0.32|ENSG00000223609|chr11:5234108-5234108|C/A|missense_variant'] 75320 19927 NPVTGLLSA True PC9_epitope_Rep1 870.4810822189 870.47998993586 81.468 2 -0.041209605604789847 0.015669633616228525 0.9438714419765777 ['ENSG00000044446|ENST00000379942|PHKA2'] 59313 10130 LGIETPLPK True NCI_RA007_Epitope_Rep1 966.5749826037398 966.57388993586 43.414 2 -0.041210583968299665 0.015669633616228525 0.9438714419765777 ['ICAM1-HNRNPM|1|fusion', 'ICAM1|p.E68Q|1|0.21|ENSG00000090339|chr19:10274899-10274899|G/C|missense_variant', 'ENSG00000090339|ENST00000264832|ICAM1'] 29382 7940 FVEQHTPQL True NCI_RA007_Epitope_Rep4 1097.5505587610498 1097.54946993586 37.283 2 -0.04122220758305571 0.015669633616228525 0.9438714419765777 ['ENSG00000168878|ENST00000519937|SFTPB'] 97693 6976 SHDTTIRL True PC9_epitope_Rep5 941.49304388493 941.49194993586 31.801 2 -0.04128428818808776 0.015669633616228525 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 1714 11455 AEGPVAVVV True H1975_Epitope_Rep2 839.4752685624699 839.47472496793 49.116 1 -0.0413129432766819 0.015669633616228525 0.9438714419765777 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'nc|ENSG00000167962|Q86UK7-4|ZNF598', 'ENST00000565396.5_1_16:2048964-2050409:-|nuORF'] 89302 6687 RELSEITTA True NCI_RA007_Epitope_Rep4 1018.5294889633 1018.52838993586 32.346 2 -0.04132093735434647 0.015669633616228525 0.9438714419765777 ['nc|ENSG00000165699|Q92574-2|TSC1', 'ENSG00000165699|ENST00000298552|TSC1', 'TSC1|p.C822Sfs*3|1|0.39|ENSG00000165699|chr9:132901625-132901626|AC/-|frameshift_variant', 'TSC1|p.A944Gfs*8|1|0.15|ENSG00000165699|chr9:132897319-132897328|CTGCTCTCTG/-|frameshift_variant'] 23676 22908 EYGSIIAFF True PC9_epitope_Rep4 1045.51204799401 1045.5114749679299 96.335 1 -0.04132819270511173 0.015669633616228525 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 84746 9719 QHGPPNIVV True PC9_epitope_Rep4 959.51886470995 959.51776993586 45.021 2 -0.041330097357514736 0.015669633616228525 0.9438714419765777 ['ENSG00000124209|ENST00000244040|RAB22A'] 20210 12987 ENTLQLVRNI True H1975_Epitope_Rep3 1198.6669854956199 1198.6658899358602 55.188 2 -0.04133968274261862 0.015669633616228525 0.9438714419765777 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 100699 16742 SLRDQLLVE True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 72.364 2 -0.04134800066401061 0.015669633616228525 0.9438714419765777 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 113571 15453 TQYTVFHSL True PC9_epitope_Rep4 1094.53965972418 1094.53856993586 67.371 2 -0.041404662757544224 0.015669633616228525 0.9438714419765777 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant', 'ENST00000504435.1_1_4:882633-887812:-|nuORF'] 115191 18050 TVASGSEVVL True PC9_epitope_Rep3 960.5127762699999 960.51166993586 74.628 2 -0.04140719582755065 0.015669633616228525 0.9438714419765777 ['nc|ENSG00000256590|A0JD37|TRDV3'] 70094 21061 LYIPIFSTF True NCI_RA007_Epitope_Rep3 1099.59538369515 1099.5942899358602 91.628 2 -0.04140857775782904 0.015669633616228525 0.9438714419765777 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12'] 107226 23616 SYPNVFLVF True PC9_epitope_Rep2 1084.5593325396 1084.55822993586 96.307 2 -0.041444832476260386 0.015669633616228525 0.9438714419765777 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 17155 11507 EGYADKNLIA True PC9_epitope_Rep5 1092.54513902744 1092.5440499358601 49.258 2 -0.04145591297938248 0.015669633616228525 0.9438714419765777 ['ENSG00000106245|ENST00000222969|BUD31', 'nc|ENSG00000106245|P41223-2|BUD31', 'ENST00000466798.1_1_7:99013792-99015269:+|nuORF'] 84076 5812 QEQEERLRKQE True H1975_Epitope_Rep3 1471.7379185897496 1471.73626490379 27.378 3 -0.04148037740931724 0.015669633616228525 0.9438714419765777 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'ENSG00000261794|ENST00000566740|GOLGA8H'] 76183 16039 NRSRIQVWL True PC9_epitope_Rep5 1170.6621748986997 1170.66052490379 66.683 3 -0.04149621029499732 0.015669633616228525 0.9438714419765777 ['ENSG00000182004|ENST00000414487|SNRPE'] 116950 16171 TYPIKTPTF True PC9_epitope_Rep2 1066.5698972233001 1066.5688099358601 67.455 2 -0.041506434719808076 0.015669633616228525 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 138210 19835 YQSGFSLV True PC9_epitope_Rep3 899.4388830537499 899.43833496793 81.53 1 -0.04157568727730571 0.015689683722470607 0.9438714419765777 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'ENST00000587856.1_1_17:43311355-43318139:+|nuORF'] 47324 13714 IYGYVAEQF True NCI_RA007_Epitope_Rep3 1088.5178616504397 1088.51727496793 61.265 1 -0.04164734877648799 0.015689683722470607 0.9438714419765777 ['ENST00000448693.2_1_3:52740223-52740934:+|nuORF', 'ENSG00000114902|ENST00000619898|SPCS1', 'nc|ENSG00000114902|Q9Y6A9|SPCS1'] 110456 15573 TIPEAFRGV True PC9_epitope_Rep3 988.5341804209198 988.5336349679301 65.051 1 -0.041684556347973696 0.015707131327345723 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 126923 10179 VPVDTGVAA True PC9_epitope_Rep5 827.4388830537498 827.43833496793 44.141 1 -0.041707046958817176 0.015707131327345723 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 44877 9748 IQDDAVHTL True PC9_epitope_Rep1 1010.50327421546 1010.50216993586 42.355 2 -0.04170714064063032 0.015707131327345723 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 116549 13919 TYFDKNYNL True PC9_epitope_Rep6 1176.5451390274397 1176.5440499358601 65.381 2 -0.0417980283007958 0.015707131327345723 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000467758.1_1_1:62941350-62941566:-|nuORF'] 109832 15763 THLGPLASL True PC9_epitope_Rep4 907.51271670035 907.51160993586 68.555 2 -0.04181129714575081 0.015707131327345723 0.9438714419765777 ['ENSG00000127399|ENST00000359623|LRRC61'] 91722 11454 RPHTVLTVI True PC9_epitope_Rep2 1034.6236641316598 1034.6225699358602 49.377 2 -0.041825985961537325 0.015707131327345723 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 1671 8154 AEGLEPPAA True H1975_Epitope_Rep2 853.4181476091699 853.4175949679301 36.314 1 -0.041830344258223094 0.015707131327345723 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 47736 9683 IYQKAFEHL True PC9_epitope_Rep4 1147.6025943339098 1147.60093490379 44.875 3 -0.04185363781861842 0.015707131327345723 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 61360 15207 LLEGSEIYL True H1975_Epitope_Rep2 1035.54882742555 1035.54827496793 63.649 1 -0.04186158288780439 0.015707131327345723 0.9438714419765777 ['TMEM199|p.E78K|1|0.28|ENSG00000244045|chr17:28358936-28358936|G/A|missense_variant', 'ENST00000581386.5_1_17:26684693-26686548:+|nuORF', 'ENST00000483505.6_1_17:26684735-26687632:+|nuORF', 'ENSG00000244045|ENST00000292114|TMEM199'] 36571 23264 GVLENIFGV True PC9_epitope_Rep2 946.5123823471798 946.5118349679301 94.969 1 -0.041861913219466515 0.015707131327345723 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 975 8108 AEAAVVAVA True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 36.132 1 -0.04187121182195824 0.015723270440251572 0.9438714419765777 ['ENSG00000211450|ENST00000534355|SELENOH'] 96051 3628 SEAPPTNQA True H1975_Epitope_Rep1 913.41412485789 913.41302993586 18.361 2 -0.04189452932712699 0.015723270440251572 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 9971 19780 AYSLTYNTI True PC9_epitope_Rep3 1044.5127762700001 1044.51166993586 81.314 2 -0.04192283257728109 0.015723270440251572 0.9438714419765777 ['ENSG00000130766|ENST00000253063|SESN2'] 88596 17861 RALLLGAL True PC9_epitope_Rep4 825.5436229058099 825.54252993586 76.743 2 -0.04193923585668083 0.015723270440251572 0.9438714419765777 ['ENST00000525095.2_1_11:134094621-134094950:+|nuORF', 'ENST00000281187.9_1_11:134094584-134094950:+|nuORF'] 73250 7167 NEIDAEPPA True H1975_Epitope_Rep2 954.42944056886 954.42834993586 32.501 2 -0.04195096367574502 0.015723270440251572 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 24065 7157 EYQKVGQSF True PC9_epitope_Rep6 1084.5189242795998 1084.5178299358602 36.607 2 -0.041967429891017705 0.015723270440251572 0.9438714419765777 ['ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0-3|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 6229 4529 APRGPGTVPA True PC9_epitope_Rep3 921.5032146458099 921.50210993586 22.512 2 -0.04207366327826654 0.015723270440251572 0.9438714419765777 ['ENST00000394426.5_1_12:53625883-53625982:-|nuORF', 'ENST00000550721.5_1_12:53625883-53626613:-|nuORF', 'ENST00000550362.5_2_12:53625883-53626360:-|nuORF'] 131130 18313 VVPEQGIVDL True PC9_epitope_Rep6 1067.5862755634298 1067.5851699358602 83.083 2 -0.04207567233422615 0.015723270440251572 0.9438714419765777 ['ENSG00000166535|ENST00000299698|A2ML1'] 137854 12049 YPIEHGIITN True PC9_epitope_Rep3 1155.5924235730297 1155.5913299358601 51.384 2 -0.04209364038840965 0.015723270440251572 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 67727 21374 LTGLLLLQ True PC9_epitope_Rep2 869.55860426361 869.55750993586 87.684 2 -0.04209612078975234 0.015723270440251572 0.9438714419765777 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'ENST00000459805.5_1_1:155188177-155188668:-|nuORF', 'ENST00000473223.5_1_1:155187710-155188755:-|nuORF', 'ENST00000470104.1_1_1:155210013-155210993:-|nuORF', 'ENST00000467918.5_1_1:155209712-155213886:-|nuORF'] 140238 13395 YWQNHPEL True PC9_epitope_Rep5 1085.4930438849299 1085.49194993586 56.54 2 -0.04211987008425163 0.015723270440251572 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 89121 4695 REFGNPNRPVA True NCI_RA007_Epitope_Rep4 1255.64216773011 1255.64106993586 24.485 2 -0.04212409601641015 0.015723270440251572 0.9438714419765777 ['ENSG00000007520|ENST00000007390|TSR3'] 20828 13273 EQPETYYKW True PC9_epitope_Rep6 1242.5557037111398 1242.55460993586 62.706 2 -0.04215129986090843 0.015723270440251572 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1'] 119076 15033 VEHLQFLLS True NCI_RA007_Epitope_Rep4 1084.59169529704 1084.5905899358602 65.339 2 -0.04215553946050692 0.015723270440251572 0.9438714419765777 ['nc|ENSG00000170085|Q8NDZ2-4|SIMC1', 'nc|ENSG00000170085|Q8NDZ2-3|SIMC1', 'nc|ENSG00000170085|Q8NDZ2|SIMC1', 'ENSG00000170085|ENST00000429602|SIMC1'] 92134 13896 RQALMPVIL True NCI_RA007_Epitope_Rep4 1039.6212216035099 1039.6201299358602 60.724 2 -0.042195130034995046 0.015742981857299488 0.9438714419765777 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2'] 39744 18793 HPYLFPVA True PC9_epitope_Rep5 942.4963383602199 942.49524993586 77.3 2 -0.04221232051648397 0.015742981857299488 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 128707 16932 VSPASFENV True PC9_epitope_Rep5 948.45526139388 948.45416993586 70.145 2 -0.04223109184400072 0.015742981857299488 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 86416 9841 QQPQPLPPP True PC9_epitope_Rep4 1000.5341804209198 1000.53308993586 45.502 2 -0.04227885650180916 0.015762364768425626 0.9438714419765777 ['nc|ENSG00000204540|Q9UIG5-2|PSORS1C1', 'PSORS1C1|p.P145Lfs*7|1|0.33|ENSG00000204540|chr6:31139906-31139906|C/-|frameshift_variant', 'ENSG00000204540|ENST00000259881|PSORS1C1'] 117671 12535 VAKGGLGLI True PC9_epitope_Rep1 826.5276384884999 826.52654993586 53.086 2 -0.042343641741632757 0.015762364768425626 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10'] 68101 13931 LTPEEEEILNK True PC9_epitope_Rep1 1313.6714617393698 1313.6703699358602 58.421 2 -0.04236094779191995 0.015762364768425626 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 107225 23863 SYPNVFLVF True PC9_epitope_Rep1 1084.5593325396 1084.55822993586 96.591 2 -0.04236845070993324 0.015762364768425626 0.9438714419765777 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 31807 12202 GEMEPPALP True H1975_Epitope_Rep3 939.4371688015898 939.43606993586 52.107 2 -0.042379722803310364 0.015782723812675824 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 132171 7986 VYISEHEHF True PC9_epitope_Rep6 1159.5298233164701 1159.5281849037901 40.181 3 -0.042468477060577714 0.015822784810126583 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 97023 5279 SEVSPRISA True H1975_Epitope_Rep3 944.4927095317599 944.49160993586 25.388 2 -0.042487031436556535 0.015822784810126583 0.9438714419765777 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 35534 18111 GTIGLIHAI True PC9_epitope_Rep1 893.53345214493 893.53234993586 74.456 2 -0.04249782659214032 0.015822784810126583 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 54025 12135 KYLPESNTL True PC9_epitope_Rep5 1063.55497543515 1063.5538699358601 51.667 2 -0.0425333622630003 0.015822784810126583 0.9438714419765777 ['ENST00000324677.11_1_17:28011643-28088245:-|nuORF', 'ENST00000269033.7_1_17:28011643-28257046:-|nuORF'] 2755 5835 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 27.515 2 -0.04254021449548794 0.01583757184799239 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 77500 10079 NYQGHFHLF True NCI_RA007_Epitope_Rep3 1161.5355774032498 1161.5344899358602 46.739 2 -0.042544193796645806 0.01583757184799239 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 5170 21094 ALPEDLVEV True PC9_epitope_Rep5 983.5175272972699 983.51642993586 86.201 2 -0.04256228351190244 0.01583757184799239 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 54259 17924 KYPHYFPVM True PC9_epitope_Rep3 1180.57393705792 1180.5722849037902 74.15 3 -0.04259224532917215 0.01583757184799239 0.9438714419765777 ['ENSG00000123213|ENST00000380985|NLN', 'ENST00000506677.1_1_5:65076017-65081739:+|nuORF', 'ENST00000506539.5_1_5:65018131-65088776:+|nuORF'] 136668 15160 YIDSDCIGNPD True H1975_Epitope_Rep3 1210.48121844154 1210.48012993586 63.716 2 -0.0425979897062916 0.01583757184799239 0.9438714419765777 ['CCDC91-PDZRN4|1|fusion', 'ENST00000548316.1_1_12:41903559-41967689:+|nuORF', 'nc|ENSG00000165966|Q6ZMN7-4|PDZRN4', 'nc|ENSG00000165966|Q6ZMN7-2|PDZRN4', 'PDZRN4|p.D1005Tfs*4|1|0.32|ENSG00000165966|chr12:41573791-41573791|G/-|frameshift_variant', 'ENSG00000165966|ENST00000402685|PDZRN4'] 42568 11121 IESPPAFTA True H1975_Epitope_Rep2 931.46509780159 931.46454496793 47.812 1 -0.04262264250384006 0.01583757184799239 0.9438714419765777 ['ENSG00000152382|ENST00000367874|TADA1'] 77442 8757 NYNNQSSNF True PC9_epitope_Rep3 1086.4366512076201 1086.43554993586 38.638 2 -0.04262523878494492 0.01583757184799239 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 131091 9200 VVLYSIRN True H1975_Epitope_Rep1 962.5549158655 962.55380993586 40.295 2 -0.04263940849605189 0.01583757184799239 0.9438714419765777 ['ENSG00000176853|ENST00000334705|FAM91A1'] 33148 16361 GKPSPGLVNL True PC9_epitope_Rep4 980.5654805492 980.56438993586 70.895 2 -0.042647102192822264 0.01583757184799239 0.9438714419765777 ['ENST00000592904.5_1_19:9524750-9525065:-|nuORF'] 36816 20665 GVPQALFGV True PC9_epitope_Rep4 886.4912529797799 886.49014993586 87.646 2 -0.04265876960309053 0.01583757184799239 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 37963 7301 HEFLHEVPAA True H1975_Epitope_Rep1 1148.56145779792 1148.55982490379 33.094 3 -0.042667281910091476 0.01583757184799239 0.9438714419765777 ['ENSG00000215305|ENST00000380445|VPS16'] 84966 16559 QIDGTLSTI True PC9_epitope_Rep4 946.49712620586 946.4965749679301 71.669 1 -0.04270406390730043 0.01583757184799239 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 31507 8323 GEESPLETAA True H1975_Epitope_Rep2 1002.45056993626 1002.44946993586 36.964 2 -0.04271186442393531 0.01583757184799239 0.9438714419765777 ['ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 9893 8813 AYNPNTQTF True NCI_RA007_Epitope_Rep5 1054.4719740871801 1054.47086993586 40.564 2 -0.04271732285443335 0.01583757184799239 0.9438714419765777 ['ENSG00000174405|ENST00000442234|LIG4', 'LIG4|p.G346Efs*10|1|0.4|ENSG00000174405|chr13:108210232-108210232|C/-|frameshift_variant'] 77325 12303 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.60641490379 55.137 3 -0.042739414536851816 0.01583757184799239 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 115079 6827 TTTIAVEVK True NCI_RA007_Epitope_Rep1 960.54916177872 960.54806993586 30.562 2 -0.042762123815246446 0.01583757184799239 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 95202 13511 SAAMPGASL True PC9_epitope_Rep1 803.38473930591 803.38364993586 56.825 2 -0.042773882879002356 0.01583757184799239 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 101604 8021 SPFAEGTSA True PC9_epitope_Rep6 865.38176210045 865.3806699358599 40.329 2 -0.042806671295470514 0.01583757184799239 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 53518 15015 KVPEIEVTV True PC9_epitope_Rep4 1012.5804619069999 1012.57936993586 65.692 2 -0.04284251051763679 0.015877610088898077 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 44684 17718 IPMRDFVCA True PC9_epitope_Rep5 1050.4990578655 1050.49796993586 73.169 2 -0.04284652688122644 0.015877610088898077 0.9438714419765777 ['ENSG00000178896|ENST00000316052|EXOSC4'] 113431 18696 TQNDIISTL True PC9_epitope_Rep4 1003.51858992643 1003.51807496793 79.994 1 -0.04285853531743047 0.015877610088898077 0.9438714419765777 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8', 'ENST00000573144.1_1_16:31141947-31142577:+|nuORF', 'ENST00000537402.1_1_16:31141947-31142310:+|nuORF'] 13571 19104 DPNTVFALVNY True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 79.621 2 -0.042908961983520205 0.015877610088898077 0.9438714419765777 ['CON__P34955'] 1155 11667 AEASAVLKV True PC9_epitope_Rep5 886.5123823471799 886.5118349679301 49.873 1 -0.04294791410022842 0.015897955386491906 0.9438714419765777 ['ENSG00000166123|ENST00000340124|GPT2'] 124634 21427 VLIDDLTTL True PC9_epitope_Rep4 1001.56447748969 1001.56338993586 90.595 2 -0.04296102562553706 0.015915996610099424 0.9438714419765777 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'ENST00000370308.8_1_6:74189644-74210455:+|nuORF', 'nc|ENSG00000135297|Q9Y2Z2-2|MTO1'] 102508 8914 SPYSGPKFNSA True PC9_epitope_Rep2 1153.54038800017 1153.53928993586 39.647 2 -0.042963195231040745 0.015915996610099424 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39'] 92272 12046 RQLEAIVRI True PC9_epitope_Rep4 1096.6716769532397 1096.6705699358602 54.141 2 -0.04304740462050585 0.015915996610099424 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 56749 6986 LEANKLQLQEK True NCI_RA007_Epitope_Rep2 1312.7350650554397 1312.73341490379 31.796 3 -0.043048629627612946 0.015915996610099424 0.9438714419765777 ['nc|ENSG00000167740|Q8WUJ1-3|CYB5D2', 'ENSG00000167740|ENST00000301391|CYB5D2'] 118850 4327 VEEKPPPAP True H1975_Epitope_Rep2 962.5072969667398 962.50618993586 21.758 2 -0.04306338251309541 0.015915996610099424 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 135456 5270 YEAPGVREA True H1975_Epitope_Rep3 990.4770594676198 990.47651496793 25.355 1 -0.043088537101142445 0.015915996610099424 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000485021.1_1_1:115118369-115124212:-|nuORF'] 70977 5869 MEQERFEEA True H1975_Epitope_Rep3 1167.48663817515 1167.48554993586 27.586 2 -0.04309057314755752 0.015915996610099424 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1'] 131822 21974 VYAPPVGGFSF True PC9_epitope_Rep3 1139.56514619603 1139.56457496793 89.824 1 -0.04310200942796082 0.015915996610099424 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 74890 10664 NLQTVNVDEN True PC9_epitope_Rep2 1144.53603089572 1144.5349299358602 46.331 2 -0.0431458413447112 0.01593633732947499 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 132587 13112 VYPPPHQVF True PC9_epitope_Rep1 1082.5549158654999 1082.55380993586 55.302 2 -0.04315870943425082 0.015954039141127117 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 1428 7733 AEEGPPLGA True H1975_Epitope_Rep3 839.4024975450299 839.40140993586 34.729 2 -0.04316191296088389 0.015954039141127117 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 38228 5231 HEVQRLTVT True H1975_Epitope_Rep1 1081.5880068989297 1081.5869099358601 25.183 2 -0.04316390060165834 0.015954039141127117 0.9438714419765777 ['nc|ENSG00000062038|P22223-2|CDH3', 'chr16:68695923-68698093|483|18.67|0.81|4.53|+|ENST00000429102|CDH3,CDH3', 'ENST00000542274.5_1_16:68679206-68732300:+|nuORF', 'ENSG00000062038|ENST00000264012|CDH3'] 138135 8049 YQLDQDHNV True PC9_epitope_Rep4 1130.49925146418 1130.49814993586 38.41 2 -0.0431750134500503 0.015954039141127117 0.9438714419765777 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'RSF1|p.K386Nfs*6|1|0.19|ENSG00000048649|chr11:77702071-77702071|T/-|frameshift_variant', 'ENST00000534794.1_1_11:77413524-77475723:-|nuORF'] 24535 18958 FALASHLIEA True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 78.285 2 -0.043197701119514355 0.015954039141127117 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 17788 6710 EHVPSSSSI True PC9_epitope_Rep5 941.44542498617 941.44432993586 30.782 2 -0.04320152967894274 0.015954039141127117 0.9438714419765777 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 110859 17942 TLAAHLPAEF True PC9_epitope_Rep2 1068.56039516876 1068.55928993586 74.319 2 -0.04322585834648936 0.015954039141127117 0.9438714419765777 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2'] 109268 6245 TGAPHLEEK True NCI_RA007_Epitope_Rep5 980.4927095317599 980.49160993586 30.697 2 -0.043244729664952485 0.015954039141127117 0.9438714419765777 ['nc|ENSG00000258597|P20848|SERPINA2'] 136456 14803 YHGLTVPL True PC9_epitope_Rep6 898.4912529797799 898.49014993586 68.909 2 -0.0432734563130235 0.015954039141127117 0.9438714419765777 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 89292 13161 RELLIIGGVAA True NCI_RA007_Epitope_Rep4 1110.6760936273397 1110.6749899358601 57.723 2 -0.043376765906388594 0.015994709760079353 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 105956 22004 SVLGALIGV True PC9_epitope_Rep4 827.5116540711899 827.51054993586 92.859 2 -0.04341676322171911 0.015994709760079353 0.9438714419765777 ['nc|ENSG00000164051|Q96ER9-2|CCDC51', 'ENSG00000164051|ENST00000395694|CCDC51'] 140394 18961 YYEYNHDLF True PC9_epitope_Rep3 1262.5244035828598 1262.5233099358602 78.158 2 -0.04347022097967627 0.016013389259664855 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 30015 17451 FYHKYFNYL True PC9_epitope_Rep2 1293.61824439805 1293.6171499358602 72.378 2 -0.04348190183510402 0.016013389259664855 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 78300 5047 PASGPIRPIVR True NCI_RA007_Epitope_Rep5 1161.6982260542497 1161.6965849037902 26.113 3 -0.04350445054839743 0.016013389259664855 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF'] 32069 5525 GEVTNVTTA True NCI_RA007_Epitope_Rep5 890.4345259493 890.43397496793 27.938 1 -0.04350653344646606 0.016013389259664855 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 61989 20163 LLLPSEYSL True PC9_epitope_Rep4 1033.56956287013 1033.56846993586 85.695 2 -0.04354548617983815 0.016013389259664855 0.9438714419765777 ['ENST00000463792.5_1_2:220099420-220100035:+|nuORF', 'ENST00000477479.5_1_2:220099420-220101164:+|nuORF'] 45353 17798 ISDGANIINL True PC9_epitope_Rep4 1028.55022440788 1028.54912993586 76.491 2 -0.04358619521854907 0.016013389259664855 0.9438714419765777 ['PTCHD4|p.F810Sfs*25|1|0.13|ENSG00000244694|chr6:47878415-47878415|A/-|frameshift_variant', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 46376 10991 ITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1118.5277749905702 1118.5266699358601 47.365 2 -0.043611758038625395 0.016031732914635156 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 131780 20368 VYAFSIENF True PC9_epitope_Rep6 1088.5178616504397 1088.51676993586 91.043 2 -0.0436157175785059 0.016031732914635156 0.9438714419765777 ['ENST00000528557.5_1_1:26759436-26769365:+|nuORF', 'nc|ENSG00000117682|Q86SQ9-3|DHDDS', 'nc|ENSG00000117682|Q86SQ9-4|DHDDS', 'ENSG00000117682|ENST00000236342|DHDDS', 'nc|ENSG00000117682|Q86SQ9-2|DHDDS'] 34591 16658 GQGPVLFL True H1975_Epitope_Rep2 829.46978925921 829.4692449679301 69.309 1 -0.043623948514362805 0.016031732914635156 0.9438714419765777 ['nc|ENSG00000173928|Q6NVH7|SWSAP1', 'ENSG00000173928|ENST00000674460|SWSAP1'] 86042 19335 QPLIGAIAA True PC9_epitope_Rep1 852.5069030439199 852.50580993586 79.178 2 -0.043652527706621064 0.016031732914635156 0.9438714419765777 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 68118 8755 LTPERFHNL True PC9_epitope_Rep2 1125.59309227937 1125.59143490379 39.033 3 -0.043692887296799536 0.016031732914635156 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 91810 14092 RPNATLILA True PC9_epitope_Rep1 967.5814649665099 967.58036993586 59.034 2 -0.04369460946098515 0.016031732914635156 0.9438714419765777 ['ENSG00000179913|ENST00000318683|B3GNT3'] 56925 6822 LEDRPSNLP True H1975_Epitope_Rep2 1039.52982331647 1039.5287299358602 31.159 2 -0.04371524256755518 0.016031732914635156 0.9438714419765777 ['ENSG00000108239|ENST00000225235|TBC1D12'] 108521 14073 TEFPGVVV True H1975_Epitope_Rep3 846.4487194614599 846.4481749679301 59.456 1 -0.04379557820003903 0.016050734367576276 0.9438714419765777 ['ENST00000521583.5_1_5:154238316-154247291:+|nuORF', 'nc|ENSG00000155508|Q9UFF9-3|CNOT8', 'ENSG00000155508|ENST00000285896|CNOT8'] 107721 15286 TALLKIEGV True PC9_epitope_Rep6 942.57498260374 942.57388993586 70.914 2 -0.0438035251120101 0.016050734367576276 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 115714 9346 TVLERVEGA True PC9_epitope_Rep4 972.5240096600398 972.52290993586 43.556 2 -0.043816374852825295 0.016050734367576276 0.9438714419765777 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 104662 10847 STAAKIMGV True PC9_epitope_Rep3 876.4738886634799 876.47278993586 46.696 2 -0.04382947268634638 0.016050734367576276 0.9438714419765777 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31'] 20342 12170 EPGFSEVLP True H1975_Epitope_Rep3 973.4756624852898 973.47456993586 51.983 2 -0.043837438478976996 0.016050734367576276 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 305 11185 AAIAAVNAL True NCI_RA007_Epitope_Rep3 812.47560291564 812.4745099358599 51.104 2 -0.043850169824548244 0.01607105969840942 0.9438714419765777 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'nc|ENSG00000131051|Q14498-2|RBM39', 'ITGB4-RBM39|1|fusion', 'ENST00000496183.5_1_20:34292405-34295154:-|nuORF', 'ITGB4-RBM39|2|fusion', 'ENST00000397254.2_1_X:43889279-43890164:+|nuORF'] 5639 14193 APAGGFQNIA True PC9_epitope_Rep5 944.4715801643599 944.47048993586 59.6 2 -0.04389505416262691 0.016109711264405798 0.9438714419765777 ['ENSG00000037897|ENST00000324871|METTL1'] 118209 15577 VAYEAPSL True PC9_epitope_Rep4 848.4279840168799 848.42688993586 67.838 2 -0.043905561864904984 0.016109711264405798 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF'] 125989 10398 VPAGGAVAVSA True PC9_epitope_Rep3 897.4919812557699 897.4914349679301 44.936 1 -0.0439191797395834 0.016109711264405798 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 109944 10165 THSELTVTV True PC9_epitope_Rep4 985.50802524273 985.50692993586 46.776 2 -0.043949038031814415 0.016109711264405798 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 72029 18011 MQMSPALTC True PC9_epitope_Rep5 980.4129452830399 980.41184993586 74.296 2 -0.0439587574496311 0.016109711264405798 0.9438714419765777 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 101665 19122 SPFQFTVGP True PC9_epitope_Rep6 978.4810822188999 978.47998993586 86.202 2 -0.04398725788116619 0.016109711264405798 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'ENST00000474358.5_1_X:153580213-153581146:-|nuORF', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 13114 7088 DLSKNFEVVA True NCI_RA007_Epitope_Rep3 1120.57643915572 1120.57534993586 34.996 2 -0.043997714145458555 0.016109711264405798 0.9438714419765777 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.V1728Lfs*60|1|0.13|ENSG00000009694|chrX:124405213-124405219|AAGTGAC/-|frameshift_variant'] 39566 7604 HPIDDLQSA True PC9_epitope_Rep2 994.47197408718 994.47086993586 34.621 2 -0.04401745171205103 0.016109711264405798 0.9438714419765777 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'TRIM59|p.S202Vfs*3|1|0.51|ENSG00000213186|chr3:160438580-160438580|T/-|frameshift_variant', 'ENSG00000213186|ENST00000309784|TRIM59'] 91571 6814 RPAPALAPA True PC9_epitope_Rep3 862.50248636982 862.50138993586 31.228 2 -0.04406673032391267 0.016130031599165616 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1'] 42013 8069 IEDSEPHIP True H1975_Epitope_Rep2 1035.48728979815 1035.48618993586 35.985 2 -0.04409826269978787 0.016150351094589014 0.9438714419765777 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'ENST00000359142.7_1_12:89984763-89992387:-|nuORF'] 110069 9734 TIADIFQEEKK True NCI_RA007_Epitope_Rep1 1320.6925315371197 1320.69142993586 41.864 2 -0.04414543719556656 0.016169334021683014 0.9438714419765777 ['USP46|p.L136F|1|0.09|ENSG00000109189|chr4:52626173-52626173|G/A|missense_variant'] 86309 4905 QQHDVQEL True PC9_epitope_Rep4 995.46722305991 995.46612993586 25.462 2 -0.04422650430254385 0.016169334021683014 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 105960 13598 SVLGKVNEI True PC9_epitope_Rep1 957.54949613189 957.54838993586 57.161 2 -0.04423327189811802 0.016169334021683014 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 117672 12727 VAKGGLGLI True PC9_epitope_Rep3 826.5276384884999 826.52654993586 53.975 2 -0.04423609634222881 0.016169334021683014 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10'] 115726 20306 TVLGYISAV True PC9_epitope_Rep4 921.5171333744499 921.51602993586 86.25 2 -0.0442669161942953 0.016169334021683014 0.9438714419765777 ['ENSG00000119285|ENST00000366582|HEATR1'] 119213 4421 VEKPVGVAA True H1975_Epitope_Rep2 868.5018176634799 868.50072993586 22.113 2 -0.0442946974344571 0.016189650187915582 0.9438714419765777 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'ENST00000562659.1_1_16:85698640-85699994:+|nuORF'] 88028 19626 QVSSWDPLV True PC9_epitope_Rep2 1029.5131106231697 1029.51200993586 80.876 2 -0.04432553972692789 0.01620896138756969 0.9438714419765777 ['ENST00000591991.1_1_19:5667238-5667808:+|nuORF', 'ENST00000592555.1_1_19:5666960-5667808:+|nuORF'] 638 10666 AATEIVERV True PC9_epitope_Rep3 986.53965972418 986.53856993586 45.973 2 -0.04433456843801144 0.01620896138756969 0.9438714419765777 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51'] 136677 11956 YIEGGTASGFY True H1975_Epitope_Rep2 1163.51350454599 1163.51297496793 51.068 1 -0.04439817907593962 0.01620896138756969 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 63631 16813 LPNHLAQAL True PC9_epitope_Rep3 975.55016483823 975.54906993586 69.821 2 -0.04441191105305687 0.01620896138756969 0.9438714419765777 ['ENSG00000155897|ENST00000286355|ADCY8'] 92184 12405 RQFSTPFQL True NCI_RA007_Epitope_Rep3 1122.5821932425 1122.58108993586 56.001 2 -0.04446297558966196 0.016227264281437743 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 44516 15238 IPADLPVVV True H1975_Epitope_Rep2 921.55351888317 921.55242993586 63.771 2 -0.044464228630897204 0.016227264281437743 0.9438714419765777 ['nc|ENSG00000172940|Q9Y226-2|SLC22A13', 'ENSG00000172940|ENST00000311856|SLC22A13'] 28665 14950 FSSPPVIL True H1975_Epitope_Rep2 858.4851049701799 858.4845549679301 62.657 1 -0.04449328925480972 0.016227264281437743 0.9438714419765777 ['ENSG00000171867|ENST00000379440|PRNP'] 103572 14840 SRDEYYHLL True PC9_epitope_Rep5 1194.56693710118 1194.56530490379 62.084 3 -0.04456187044785416 0.016227264281437743 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'CREBBP|p.Q816Kfs*33|1|0.3|ENSG00000005339|chr16:3773768-3773768|G/-|frameshift_variant', 'CREBBP|p.S976Pfs*22|1|0.13|ENSG00000005339|chr16:3769309-3769309|G/-|frameshift_variant'] 34716 8928 GQMKEPIQL True NCI_RA007_Epitope_Rep3 1042.5481162329 1042.5470099358602 42.201 2 -0.0446079174413613 0.016227264281437743 0.9438714419765777 ['ENSG00000105483|ENST00000651546|CARD8', 'ENST00000517510.5_1_19:48707456-48744240:-|nuORF', 'ENST00000522773.5_1_19:48714969-48736545:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-7|CARD8', 'ENST00000522051.5_1_19:48714969-48735770:-|nuORF', 'nc|ENSG00000105483|Q9Y2G2-1|CARD8', 'nc|ENSG00000105483|Q9Y2G2-4|CARD8'] 36814 21459 GVPQALFGV True PC9_epitope_Rep3 886.4912529797799 886.49014993586 87.833 2 -0.044662816454121124 0.016227264281437743 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 98055 9736 SHTSVGNIL True PC9_epitope_Rep4 926.48214484806 926.48104993586 45.087 2 -0.04467774792621691 0.016227264281437743 0.9438714419765777 ['ENSG00000160190|ENST00000352133|SLC37A1', 'SLC37A1|p.F372Tfs*13|1|0.28|ENSG00000160190|chr21:42563854-42563857|TGTT/-|frameshift_variant', 'nc|ENSG00000134955|Q8TED4-3|SLC37A2', 'ENST00000526405.5_1_11:124933263-124955028:+|nuORF', 'nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'ENSG00000134955|ENST00000403796|SLC37A2'] 34170 17079 GPFSQFIKA True PC9_epitope_Rep6 993.5283667644898 993.52726993586 78.263 2 -0.044756542975851764 0.016287519095000206 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 14802 22103 DYATIFNNL True PC9_epitope_Rep4 1069.5080252427301 1069.50747496793 93.236 1 -0.044776629837659294 0.016287519095000206 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 43170 4393 IGSGC[Carbamidomethyl]NLDSAR True H1975_Epitope_Rep3 1148.5244209456298 1148.5233299358601 22.018 2 -0.0447863278189341 0.016287519095000206 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 84745 10230 QHGPPNIVV True PC9_epitope_Rep2 959.51886470995 959.51776993586 44.685 2 -0.04482629269715819 0.016287519095000206 0.9438714419765777 ['ENSG00000124209|ENST00000244040|RAB22A'] 17301 9499 EHDPHVLLA True PC9_epitope_Rep3 1029.5243440132099 1029.5232499358601 41.487 2 -0.04486552382542873 0.016287519095000206 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 47670 22028 IYPPLLGALSF True PC9_epitope_Rep6 1189.6746966450098 1189.67358993586 97.659 2 -0.04489023343655776 0.01630782569205045 0.9438714419765777 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 66634 10600 LSSQVGLTSV True PC9_epitope_Rep3 989.5393253710099 989.53822993586 45.72 2 -0.044901284587068754 0.01632610939112487 0.9438714419765777 ['nc|ENSG00000054523|O60333-3|KIF1B', 'nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 91848 11039 RPNGVITGLAA True PC9_epitope_Rep4 1067.60874234351 1067.60764993586 50.237 2 -0.044905249793805266 0.01632610939112487 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1', 'nc|ENSG00000122068|Q96QD9-4|FYTTD1'] 87629 6565 QTVHEVTTV True PC9_epitope_Rep5 1012.5189242796 1012.51782993586 30.222 2 -0.04491848090451373 0.01632610939112487 0.9438714419765777 ['nc|ENSG00000000460|Q9NSG2-3|FIRRM', 'nc|ENSG00000000460|Q9NSG2-2|FIRRM', 'ENSG00000000460|ENST00000359326|C1orf112', 'ENST00000498289.5_1_1:169773308-169819597:+|nuORF'] 20830 6941 EQPQEAVP True H1975_Epitope_Rep2 896.4239612655998 896.42286993586 31.618 2 -0.04494481612638168 0.01632610939112487 0.9438714419765777 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'P3H1|p.F627Lfs*4|1|0.68|ENSG00000117385|chr1:42747755-42747756|AA/-|frameshift_variant', 'ENST00000460031.5_1_1:43220834-43232642:-|nuORF', 'nc|ENSG00000117385|Q32P28-2|P3H1', 'ENST00000495874.5_1_1:43222117-43232675:-|nuORF', 'ENST00000463465.1_1_1:43223527-43225049:-|nuORF'] 10185 9773 C[Carbamidomethyl]C[Carbamidomethyl]SGAIIVLTK True NCI_RA007_Epitope_Rep1 1220.62571548946 1220.62460993586 42.018 2 -0.04494716223463266 0.01632610939112487 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000563986.1_1_15:72494793-72499131:-|nuORF'] 129155 17936 VTDDLVCLVY True H1975_Epitope_Rep3 1138.55801221026 1138.55747496793 75.12 1 -0.044964058988376354 0.01632610939112487 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 76934 16262 NVPDRYFAV True PC9_epitope_Rep5 1079.53999407735 1079.5388899358602 67.543 2 -0.04499784038913438 0.01632610939112487 0.9438714419765777 ['nc|ENSG00000143061|O75054-2|IGSF3', 'ENSG00000143061|ENST00000369486|IGSF3', 'IGSF3|p.S317F|2|0.57|ENSG00000143061|chr1:116608214-116608214|G/A|missense_variant'] 33344 6708 GLDVEDVK True NCI_RA007_Epitope_Rep5 873.4443623570099 873.44326993586 32.474 2 -0.04501446730439973 0.01634303873217639 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5'] 491 6606 AAPAEEPAAAA True PC9_epitope_Rep3 967.4610750503098 967.45996993586 30.435 2 -0.045015063183532766 0.01634303873217639 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 36774 10166 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 44.105 2 -0.0450234070507109 0.01634303873217639 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 55059 23085 LALGISPDTI True PC9_epitope_Rep3 998.56481184286 998.56370993586 94.064 2 -0.04506158811058177 0.01634303873217639 0.9438714419765777 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|2|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|2'] 18236 19618 EISAHLSALVL True PC9_epitope_Rep4 1151.65502382959 1151.65392993586 83.577 2 -0.04506574634741779 0.01634303873217639 0.9438714419765777 ['ENST00000554739.5_1_14:64855058-64855755:+|nuORF'] 113240 6507 TQDTQPHYI True PC9_epitope_Rep6 1101.50908787189 1101.50798993586 33.698 2 -0.04506715251675192 0.01634303873217639 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 107425 4516 SYTSHTNEI True NCI_RA007_Epitope_Rep5 1050.4618033263002 1050.4607099358602 24.024 2 -0.04509973789423323 0.01634303873217639 0.9438714419765777 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 93442 9132 RSDEIVLTV True PC9_epitope_Rep6 1030.56587447202 1030.56476993586 45.23 2 -0.045111911140545656 0.01634303873217639 0.9438714419765777 ['nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-9|CTCFL', 'nc|ENSG00000124092|Q8NI51-4|CTCFL', 'nc|ENSG00000124092|Q8NI51-8|CTCFL'] 125726 21291 VNEQLYIL True PC9_epitope_Rep3 990.5385970950199 990.53750993586 87.19 2 -0.045112292841220696 0.01634303873217639 0.9438714419765777 ['SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 136747 15950 YIPGRQIIEV True PC9_epitope_Rep4 1186.6710082468999 1186.66990993586 69.281 2 -0.04514709626617094 0.01634303873217639 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 8684 21864 AVDAFFTAV True PC9_epitope_Rep5 939.4701831820299 939.46908993586 89.136 2 -0.045204462575037324 0.01634303873217639 0.9438714419765777 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 64597 10634 LREERAYIL True PC9_epitope_Rep2 1161.6506071554898 1161.64897490379 46.216 3 -0.04527661920335088 0.016377887788778876 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 103118 18453 SQLRDYITL True PC9_epitope_Rep4 1107.5924235730301 1107.5913299358601 79.05 2 -0.04530552861045959 0.016377887788778876 0.9438714419765777 ['ENSG00000175595|ENST00000311895|ERCC4'] 116908 14420 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47107496793 60.736 1 -0.04531985066013976 0.016377887788778876 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 125620 15217 VMEKPSPLLVG True PC9_epitope_Rep5 1168.6525813014398 1168.6514899358601 63.542 2 -0.04537891605594178 0.016377887788778876 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2', 'G3BP1|p.Y20Ffs*5|2|0.17|ENSG00000145907|chr5:151786676-151786677|-/TT|frameshift_variant', 'ENST00000507701.1_1_4:76587113-76598433:-|nuORF', 'ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000518726.5_1_5:151166169-151166277:+|nuORF'] 139058 16939 YSLDHISSL True PC9_epitope_Rep2 1033.5080252427301 1033.5069299358602 70.397 2 -0.0453826179325864 0.016377887788778876 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 101618 16945 SPFGSITSA True PC9_epitope_Rep1 865.4181476091701 865.4175949679301 70.003 1 -0.045401835026205255 0.016377887788778876 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 29580 15724 FVIRNIVEA True PC9_epitope_Rep6 1059.6076797143498 1059.60658993586 72.706 2 -0.045410369836747184 0.016377887788778876 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 70531 17221 LYTGTVSSF True PC9_epitope_Rep4 973.47566248529 973.47511496793 74.249 1 -0.04542128526051736 0.016377887788778876 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 25348 11980 FEGGVVIAA True H1975_Epitope_Rep2 861.4596184983299 861.45852993586 51.162 2 -0.045432173604091956 0.016377887788778876 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 1222 14994 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.4488949679301 62.826 1 -0.04543491558839924 0.016377887788778876 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 5128 21122 ALMPVLNQV True PC9_epitope_Rep5 983.54738795691 983.54628993586 86.306 2 -0.04550166706989582 0.016377887788778876 0.9438714419765777 ['ENSG00000223496|ENST00000435634|EXOSC6'] 21788 6600 ESDINSVRY True H1975_Epitope_Rep2 1081.50400249145 1081.5034749679298 30.297 1 -0.045551412512712365 0.016377887788778876 0.9438714419765777 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000559541.1_1_15:52416976-52428016:-|nuORF'] 26462 21912 FIPPDGDFEL True PC9_epitope_Rep5 1148.5389910178399 1148.5378899358602 89.324 2 -0.04555550255157832 0.016377887788778876 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 37170 11752 GVTLVPIE True NCI_RA007_Epitope_Rep5 826.48001958974 826.4794749679301 51.863 1 -0.045571602765941535 0.016377887788778876 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 68434 18186 LTTNIMEIL True NCI_RA007_Epitope_Rep3 1046.56818297114 1046.5670899358602 79.652 2 -0.04563047312648122 0.016377887788778876 0.9438714419765777 ['nc|ENSG00000171560|P02671|FGA', 'ENSG00000171560|ENST00000403106|FGA'] 111526 18868 TLLRLLYEA True PC9_epitope_Rep6 1090.6386454894598 1090.63754993586 85.224 2 -0.04564689811146741 0.016377887788778876 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M', 'ENST00000524711.5_1_11:32608681-32615496:+|nuORF', 'nc|ENSG00000149100|Q7L2H7-2|EIF3M'] 119151 12421 VEIPDPVEA True H1975_Epitope_Rep3 967.4862271689899 967.48512993586 52.968 2 -0.04567069545511773 0.016377887788778876 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 137851 11959 YPIEHGIITN True PC9_epitope_Rep1 1155.5924235730297 1155.5913299358601 50.867 2 -0.04570947446539008 0.016377887788778876 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 131864 18345 VYDPATETW True PC9_epitope_Rep4 1080.4763907612798 1080.47528993586 78.631 2 -0.045720398449296464 0.016377887788778876 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 28722 15030 FSVTGRVL True PC9_epitope_Rep5 877.50215201665 877.50104993586 62.816 2 -0.04575510058280048 0.016415417293930833 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 71900 11206 MPQSGTGVSV True PC9_epitope_Rep1 961.45388149489 961.45333496793 47.985 1 -0.04577461280753957 0.016415417293930833 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 37525 9478 GYLAVAVVK True H1975_Epitope_Rep3 918.5538532363399 918.55274993586 41.462 2 -0.04582483017754557 0.016415417293930833 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 95347 20488 SAGPEGLLGV True PC9_epitope_Rep5 898.4759968384599 898.47488993586 83.847 2 -0.0458588390880254 0.016415417293930833 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11', 'nc|ENSG00000130935|Q9H8H0-2|NOL11'] 58968 14813 LFYTTDIVP True H1975_Epitope_Rep2 1067.55391280599 1067.55280993586 62.136 2 -0.045869759067223126 0.016415417293930833 0.9438714419765777 ['ENSG00000175398|ENST00000309675|OR10P1'] 101737 14792 SPHGIIVIA True PC9_epitope_Rep1 905.5334521449299 905.5329049679301 61.718 1 -0.04592142614739356 0.016415417293930833 0.9438714419765777 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 135676 6137 YEGPPDDEA True H1975_Epitope_Rep3 991.3770706428298 991.3765249679301 28.618 1 -0.045938535519662656 0.016415417293930833 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 34854 8435 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42828993586 39.909 2 -0.045944159859707054 0.016415417293930833 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 90592 6891 RKIKGVIEL True NCI_RA007_Epitope_Rep4 1054.6862643882198 1054.6851699358601 33.124 2 -0.04595229817766427 0.016415417293930833 0.9438714419765777 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF', 'ENST00000495254.5_1_1:79119932-79128426:+|nuORF'] 29237 16384 FVDEPLIHATT True PC9_epitope_Rep1 1241.6292030045697 1241.62810993586 67.843 2 -0.04598131605392003 0.016415417293930833 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 119904 14232 VEWDYKLVP True NCI_RA007_Epitope_Rep5 1147.5913609438699 1147.59026993586 61.434 2 -0.04598759803181363 0.016415417293930833 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4'] 112848 15799 TPMSVLQQA True PC9_epitope_Rep4 973.49026700361 973.48916993586 68.696 2 -0.04601612488651608 0.016432312069605378 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant'] 9179 19820 AVPDEIPPLE True PC9_epitope_Rep2 1078.55464108198 1078.55354993586 81.627 2 -0.04604502928409615 0.016432312069605378 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 49373 16963 KIIDIFTTL True NCI_RA007_Epitope_Rep5 1062.6324974798601 1062.6314099358601 72.008 2 -0.04606551378557611 0.016432312069605378 0.9438714419765777 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant', 'DNAH5|p.A481T|1|0.13|ENSG00000039139|chr5:13913838-13913838|C/T|missense_variant'] 95243 8133 SADETWDSA True NCI_RA007_Epitope_Rep5 980.37231961556 980.37177496793 37.967 1 -0.04608086673318998 0.016432312069605378 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 88821 5909 RDTQALLSA True NCI_RA007_Epitope_Rep3 973.51925863277 973.51816993586 30.217 2 -0.046102301763855096 0.016432312069605378 0.9438714419765777 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF'] 66213 9864 LSPQAVNSIAK True PC9_epitope_Rep1 1126.6346227381798 1126.63352993586 42.801 2 -0.04610566463962901 0.016432312069605378 0.9438714419765777 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000472930.6_1_7:87835795-87839460:-|nuORF'] 107637 20402 TAIDILTTC True PC9_epitope_Rep4 949.4790336135701 949.47792993586 86.623 2 -0.04611392844765575 0.016432312069605378 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 2552 6381 AERGDWVQA True NCI_RA007_Epitope_Rep5 1030.4832074772198 1030.48210993586 31.217 2 -0.04611886647539338 0.016432312069605378 0.9438714419765777 ['ENST00000524001.1_1_8:21768344-21770030:-|nuORF', 'ENSG00000147443|ENST00000276420|DOK2'] 134406 11332 WTDGSTLQY True H1975_Epitope_Rep1 1069.47163973401 1069.47107496793 48.567 1 -0.046138125859519076 0.016432312069605378 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'nc|ENSG00000038427|P13611-3|VCAN', 'nc|ENSG00000038427|P13611-4|VCAN', 'ENST00000505615.1_1_5:82849283-82876028:+|nuORF'] 44599 8174 IPGTGFTVDA True PC9_epitope_Rep6 976.4865615221598 976.48546993586 40.997 2 -0.046149784071398664 0.016432312069605378 0.9438714419765777 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 103 18629 AAASHFFNL True PC9_epitope_Rep5 976.4766655448 976.47556993586 76.682 2 -0.04619089661479965 0.016432312069605378 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-4|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-3|KLHL7'] 15490 10039 EAQFTAVE True H1975_Epitope_Rep1 893.4130622287298 893.4125149679301 43.555 1 -0.04619692740905646 0.01645225136071252 0.9438714419765777 ['ENSG00000121270|ENST00000356608|ABCC11', 'nc|ENSG00000121270|Q96J66-2|ABCC11'] 63493 20812 LPIFLPRVA True PC9_epitope_Rep5 1024.64333694708 1024.64222993586 85.104 2 -0.04619924580630683 0.01645225136071252 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH'] 45068 5507 IQQNTFTR True PC9_epitope_Rep3 1006.51959298594 1006.51848993586 26.258 2 -0.046236722431720924 0.016468114926419062 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 53639 18516 KWNPTAGVAF True PC9_epitope_Rep1 1089.56072952193 1089.56017496793 76.011 1 -0.04626029934676366 0.016468114926419062 0.9438714419765777 ['ENSG00000102978|ENST00000219252|POLR2C', 'ENST00000564651.5_1_16:57496627-57504171:+|nuORF', 'ENST00000562953.5_1_16:57496627-57504105:+|nuORF'] 101615 21865 SPFFPLVSA True PC9_epitope_Rep4 963.5065686907499 963.50546993586 92.311 2 -0.04629775143590025 0.016468114926419062 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 68412 10815 LTTEVHPEL True PC9_epitope_Rep6 1037.5393253710097 1037.53822993586 52.448 2 -0.046314918675548225 0.016468114926419062 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000486268.5_1_20:34129846-34130758:+|nuORF', 'nc|ENSG00000125991|Q9Y282-2|ERGIC3'] 56477 18697 LDTFNYEQTL True PC9_epitope_Rep6 1242.5768330785397 1242.5757299358602 84.561 2 -0.04631523523889674 0.016468114926419062 0.9438714419765777 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 35379 14257 GTASGFYTV True PC9_epitope_Rep6 901.4181476091701 901.41704993586 66.73 2 -0.04631890714059226 0.016468114926419062 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 86193 5903 QPTSVLDKA True PC9_epitope_Rep6 957.5131106231698 957.51200993586 30.972 2 -0.04632108475890948 0.016468114926419062 0.9438714419765777 ['DEPP1|p.R149Kfs*6|1|0.44|ENSG00000165507|chr10:44977585-44977586|-/T|frameshift_variant', 'ENSG00000165507|ENST00000298295|DEPP1'] 140177 21050 YVTSILQSL True PC9_epitope_Rep1 1022.5648118428599 1022.56370993586 85.799 2 -0.04634551459891668 0.016468114926419062 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 44759 11606 IPSGTILKA True PC9_epitope_Rep5 898.5487678558999 898.54766993586 49.639 2 -0.04635495577044301 0.016468114926419062 0.9438714419765777 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'ACAD10|p.L79F|1|0.23|ENSG00000111271|chr12:111702211-111702211|G/T|missense_variant', 'ENST00000509936.5_1_12:112130513-112147506:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-4|ACAD10', 'ENST00000507135.5_1_12:112130513-112159479:+|nuORF'] 56716 12634 LEAFSQAISA True H1975_Epitope_Rep3 1035.5236753068698 1035.52256993586 53.802 2 -0.04635574360287403 0.016468114926419062 0.9438714419765777 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'nc|ENSG00000160563|Q6P2C8-4|MED27'] 1051 8341 AEAILGQNAA True NCI_RA007_Epitope_Rep5 956.4927095317599 956.49160993586 38.757 2 -0.04636136899462844 0.016468114926419062 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 68987 17629 LVGPVLGAA True PC9_epitope_Rep1 795.4854393233499 795.48489496793 72.602 1 -0.04637417919890134 0.016468114926419062 0.9438714419765777 ['ADAM9-RNF170|1|fusion', 'ADAM9-HTRA4|1|fusion', 'nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 118033 19372 VATDFFTVL True NCI_RA007_Epitope_Rep5 1011.5276980581499 1011.52660993586 81.398 2 -0.04638946058834684 0.016468114926419062 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 3386 12420 [Acetylation]-AGITTIEAVK True H1975_Epitope_Rep1 1043.58627587973 1043.5857749679299 52.807 1 -0.046389799917488136 0.016468114926419062 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'ENST00000424846.3_1_19:53945061-53945193:+|nuORF'] 5657 8015 APAKSLVGQVA True PC9_epitope_Rep4 1039.6025943339098 1039.6014899358602 38.28 2 -0.04640588877219779 0.016488046166529265 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 116614 20658 TYGPSFPAF True PC9_epitope_Rep4 985.4545331178899 985.45342993586 87.619 2 -0.04642310279916236 0.016488046166529265 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'RALGAPB|p.V262F|1|0.49|ENSG00000170471|chr20:38509120-38509120|G/T|missense_variant'] 70849 4409 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 22.081 2 -0.04644523274551334 0.01650729535899761 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 127112 20232 VQCETLEDLKL True PC9_epitope_Rep1 1289.65370350025 1289.65260993586 82.652 2 -0.046447102338785934 0.01650729535899761 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1', 'ENST00000561658.5_1_16:67486328-67515058:-|nuORF'] 137896 7397 YPNSGSVSA True PC9_epitope_Rep3 880.39266113732 880.39156993586 33.461 2 -0.04645175999791594 0.01650729535899761 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 43512 18464 IIDDTIFNL True NCI_RA007_Epitope_Rep4 1062.55972646242 1062.5586299358602 79.915 2 -0.046515205321873254 0.01650729535899761 0.9438714419765777 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 9538 12255 AYAGSGNVL True PC9_epitope_Rep1 850.41848196234 850.41738993586 51.999 2 -0.04654443200269889 0.016527222519886246 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 78378 6183 PAVAVTTTT True PC9_epitope_Rep1 859.4650978015901 859.46400993586 28.598 2 -0.046547896760750045 0.016527222519886246 0.9438714419765777 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 17539 6060 EHINSVSAM True PC9_epitope_Rep6 986.44913046762 986.44802993586 31.684 2 -0.04655712547883585 0.0165430572723527 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 21270 8025 ERIMKAQAL True PC9_epitope_Rep5 1058.5906497512199 1058.58954993586 35.807 2 -0.046564526393349695 0.0165430572723527 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 118819 5654 VEEGAPPPP True H1975_Epitope_Rep2 891.4337976733099 891.43324496793 26.745 1 -0.04659313500992607 0.0165430572723527 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 267 9869 AAGPVGMAA True PC9_epitope_Rep1 743.3636099385099 743.3630649679301 42.82 1 -0.04664144456948395 0.0165430572723527 0.9438714419765777 ['nc|ENSG00000106459|Q16656-2|NRF1', 'ENSG00000106459|ENST00000393232|NRF1', 'nc|ENSG00000106459|Q16656-4|NRF1'] 42014 7893 IEDSEPHIP True H1975_Epitope_Rep3 1035.48728979815 1035.48618993586 35.336 2 -0.046650167661855105 0.0165430572723527 0.9438714419765777 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'ENST00000359142.7_1_12:89984763-89992387:-|nuORF'] 135854 4292 YEQNQSDVNEA True H1975_Epitope_Rep3 1295.52658841083 1295.5254899358602 21.624 2 -0.04665272140286847 0.0165430572723527 0.9438714419765777 ['ENST00000473460.1_1_20:25394446-25397839:+|nuORF', 'GINS1|p.N172Ifs*14|1|0.41|ENSG00000101003|chr20:25441761-25441761|A/-|frameshift_variant', 'ENSG00000101003|ENST00000262460|GINS1'] 45715 17514 ISLPLPNFSS True H1975_Epitope_Rep1 1073.57571087973 1073.57517496793 72.863 1 -0.04667482134179991 0.0165430572723527 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 113141 16194 TQAPPNVVL True PC9_epitope_Rep5 937.5232813840499 937.52218993586 67.281 2 -0.04668530313153241 0.0165430572723527 0.9438714419765777 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 117430 14047 VADPVEAVL True NCI_RA007_Epitope_Rep4 911.4963979298699 911.49530993586 61.314 2 -0.04670697866589061 0.0165430572723527 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF', 'ENST00000537905.5_1_11:71735188-71747007:-|nuORF'] 9107 16554 AVLGAVVTA True PC9_epitope_Rep1 799.48035394291 799.47924993586 68.497 2 -0.04672290593318261 0.0165430572723527 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'HLA-C|p.V320F|1|0.16|ENSG00000204525|chr6:31270023-31270023|C/A|missense_variant', 'ENST00000470363.5_1_6:31237527-31238194:-|nuORF'] 97641 7839 SHAQTVVL True PC9_epitope_Rep3 853.46576650793 853.46466993586 35.141 2 -0.046738159368908266 0.0165430572723527 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 77585 12114 NYTARFSRF True PC9_epitope_Rep1 1160.57269118796 1160.5710449037902 51.459 3 -0.0467385701254585 0.0165430572723527 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 94513 15440 RYIDRIHIF True PC9_epitope_Rep2 1231.68257599011 1231.68094490379 64.668 3 -0.04675938567234705 0.0165430572723527 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 132520 19886 VYPEYVIQY True PC9_epitope_Rep4 1172.57537652656 1172.5748749679299 84.624 1 -0.04676568891047852 0.0165430572723527 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 1169 5427 AEAVLKHIA True NCI_RA007_Epitope_Rep4 950.5549158655 950.55380993586 27.45 2 -0.04677066472814704 0.01656229400131839 0.9438714419765777 ['ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-4|UBA6', 'ENST00000429659.7_1_4:68529542-68566852:-|nuORF', 'nc|ENSG00000033178|A0AVT1-3|UBA6'] 99040 5521 SKTSAQVVL True NCI_RA007_Epitope_Rep3 931.5338460677499 931.53274993586 28.716 2 -0.046772543443421265 0.01656229400131839 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'ENST00000528593.1_1_11:46804822-46806223:-|nuORF'] 280 15759 AAGTVFTTV True PC9_epitope_Rep4 865.4545331178899 865.45342993586 68.54 2 -0.04681407924440033 0.01656229400131839 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 40281 8553 HRPELIDYGK True PC9_epitope_Rep1 1226.64077074778 1226.6391149037902 37.736 3 -0.046815084247104094 0.01656229400131839 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000554508.5_1_14:69367621-69387744:-|nuORF'] 72394 8652 MTEKQLNLY True H1975_Epitope_Rep1 1138.5692456002998 1138.5681499358602 38.209 2 -0.04683089397883694 0.01658152756035264 0.9438714419765777 ['ENSG00000167985|ENST00000301761|SDHAF2', 'ENST00000536250.1_1_11:61204372-61205638:+|nuORF', 'ENSG00000256591|ENST00000541135|unknown'] 92285 17554 RQLESLIRL True PC9_epitope_Rep3 1126.6822416369398 1126.68058490379 72.707 3 -0.04683828356717831 0.01658152756035264 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4', 'nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 57917 10926 LEQLFQDEVAK True NCI_RA007_Epitope_Rep2 1318.67688147298 1318.6757899358602 47.108 2 -0.04684285153678303 0.01658152756035264 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 25369 7251 FEIATKEDP True H1975_Epitope_Rep2 1048.5076908895599 1048.5065899358601 32.825 2 -0.0468489760750398 0.01658152756035264 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 108794 6073 TEQEVAQVA True H1975_Epitope_Rep3 973.4716397340098 973.47054993586 28.372 2 -0.04690215331780807 0.01660041604020349 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 127097 11788 VQASHFEGL True PC9_epitope_Rep1 986.4821448480599 986.48104993586 50.213 2 -0.046905762457362145 0.01660041604020349 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 8916 12776 AVGKIFSNV True PC9_epitope_Rep2 933.52836676449 933.52726993586 54.447 2 -0.04692206107713722 0.01660041604020349 0.9438714419765777 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 6358 7695 APRQPGLMA True PC9_epitope_Rep1 939.4960210903898 939.49547496793 34.421 1 -0.046972765165691925 0.01660041604020349 0.9438714419765777 ['ENST00000473095.1_1_7:56170554-56174106:-|nuORF', 'ENSG00000106153|ENST00000395422|CHCHD2', 'nc|ENSG00000186940|Q5T1J5|CHCHD2P9'] 29351 16516 FVEEEEHFL True PC9_epitope_Rep4 1177.52915461013 1177.52804993586 71.501 2 -0.04697474051838279 0.01660041604020349 0.9438714419765777 ['ENSG00000168159|ENST00000305943|RNF187'] 130446 16831 VTVPPGPSL True PC9_epitope_Rep3 865.49091862661 865.48982993586 69.893 2 -0.0470523199205152 0.016641265395230052 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 76284 10410 NSDPNLHLL True NCI_RA007_Epitope_Rep5 1021.5192586327701 1021.51816993586 46.671 2 -0.04706489980707737 0.016657058145280842 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 134287 20481 WRSLPLLPV True PC9_epitope_Rep2 1079.64915060351 1079.6480499358602 84.21 2 -0.04707525929773819 0.016657058145280842 0.9438714419765777 ['ENST00000402802.7_1_7:536981-537197:-|nuORF'] 54772 12350 LAESNDVAI True PC9_epitope_Rep6 930.4658260775799 930.46472993586 58.907 2 -0.04710915591825868 0.016657058145280842 0.9438714419765777 ['ENST00000425050.5_1_10:109631494-109803030:-|nuORF'] 47571 5025 IYNEIAGK True NCI_RA007_Epitope_Rep3 906.4810822188999 906.47998993586 26.76 2 -0.04712652253736196 0.016657058145280842 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 6638 21655 APYPGFLSV True PC9_epitope_Rep1 949.49091862661 949.48982993586 88.125 2 -0.04713207797427932 0.016657058145280842 0.9438714419765777 ['ENSG00000160447|ENST00000291906|PKN3'] 72231 11922 MRYNEKELQAL True PC9_epitope_Rep2 1393.70238502817 1393.7012899358601 51.181 2 -0.04718155223082874 0.016657058145280842 0.9438714419765777 ['ENST00000588356.1_1_19:2235749-2236304:-|nuORF', 'ENST00000588450.1_1_19:2235759-2236247:-|nuORF', 'ENSG00000104886|ENST00000326631|PLEKHJ1'] 83762 7820 QEEANLYAA True H1975_Epitope_Rep2 1007.4559896698697 1007.45488993586 35.027 2 -0.04718669814008757 0.016657058145280842 0.9438714419765777 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3', 'nc|ENSG00000167081|P40426-4|PBX3', 'ENST00000538998.1_1_9:128606084-128725334:+|nuORF', 'nc|ENSG00000167081|P40426-2|PBX3'] 113890 13110 TRHPFLTAL True PC9_epitope_Rep2 1054.59236400338 1054.59126993586 55.703 2 -0.0472017846079606 0.016657058145280842 0.9438714419765777 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2'] 36467 23348 GVISGLFEL True PC9_epitope_Rep5 933.5171333744499 933.51602993586 94.79 2 -0.0472033359350098 0.016657058145280842 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 117355 13199 VAASDIAAL True PC9_epitope_Rep5 829.4545331178899 829.45342993586 55.777 2 -0.047204894326354004 0.016657058145280842 0.9438714419765777 ['ENSG00000131899|ENST00000316843|LLGL1'] 124921 16213 VLLTGLHAV True PC9_epitope_Rep2 921.5647522732099 921.56364993586 67.61 2 -0.04728191645348796 0.016657058145280842 0.9438714419765777 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3', 'ENST00000477675.1_1_22:22055420-22058252:-|nuORF', 'ENSG00000175155|ENST00000312655|YPEL2', 'ENSG00000100027|ENST00000339468|YPEL1'] 14169 13090 DSNNLC[Carbamidomethyl]LHF True NCI_RA007_Epitope_Rep1 1118.48149350449 1118.48038993586 54.91 2 -0.047307815186709075 0.016657058145280842 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 9108 16653 AVLGAVVTA True PC9_epitope_Rep1 799.48035394291 799.47924993586 68.886 2 -0.04734795275735482 0.016657058145280842 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'HLA-C|p.V320F|1|0.16|ENSG00000204525|chr6:31270023-31270023|C/A|missense_variant', 'ENST00000470363.5_1_6:31237527-31238194:-|nuORF'] 105935 14058 SVLEKQVSL True PC9_epitope_Rep1 1001.5757108797299 1001.5746099358599 58.913 2 -0.047350886731602405 0.016657058145280842 0.9438714419765777 ['ENST00000539855.5_1_11:95532492-95564417:+|nuORF', 'nc|ENSG00000166037|Q86XR8-2|CEP57', 'nc|ENSG00000166037|Q86XR8-4|CEP57', 'nc|ENSG00000166037|Q86XR8-5|CEP57', 'ENSG00000166037|ENST00000325542|CEP57', 'ENST00000432815.2_1_1:173332252-173332432:-|nuORF', 'ENST00000541768.1_1_11:95546181-95551118:+|nuORF', 'nc|ENSG00000166037|Q86XR8-3|CEP57'] 26844 19529 FLEQELETI True PC9_epitope_Rep6 1120.56520576568 1120.5641099358602 87.781 2 -0.04743269258853724 0.016697206151818987 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 70729 11548 MDYLVNNTP True NCI_RA007_Epitope_Rep5 1065.48009624273 1065.47898993586 51.068 2 -0.047442381345717564 0.016697206151818987 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2', 'ENST00000464326.1_1_9:19108613-19116611:-|nuORF'] 9361 2626 AVTTVVNPK True NCI_RA007_Epitope_Rep3 927.5389314481899 927.53782993586 14.79 2 -0.04748960934321432 0.016697206151818987 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1'] 135675 6044 YEGPPDDEA True H1975_Epitope_Rep3 991.3770706428298 991.3765249679301 28.262 1 -0.04750498866200513 0.016712289295490564 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 115395 19119 TVESVIESAL True PC9_epitope_Rep3 1046.54955570154 1046.5484499358602 78.764 2 -0.04751390946152344 0.016712289295490564 0.9438714419765777 ['ENSG00000132478|ENST00000589666|UNK'] 94541 16999 RYILLPVVL True NCI_RA007_Epitope_Rep5 1084.7008518231999 1084.6997499358602 72.147 2 -0.04752582699804373 0.016712289295490564 0.9438714419765777 ['nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'DOCK4|p.K1934Qfs*18|1|0.1|ENSG00000128512|chr7:111728375-111728376|-/G|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4'] 76564 17348 NTDSLDWALY True H1975_Epitope_Rep3 1196.5349682665599 1196.53437496793 72.382 1 -0.0475413262762812 0.016712289295490564 0.9438714419765777 ['ENSG00000108561|ENST00000225698|C1QBP'] 38469 13592 HGYLGIVEL True NCI_RA007_Epitope_Rep3 999.5389314481899 999.53782993586 60.761 2 -0.04757771439191484 0.016712289295490564 0.9438714419765777 ['ENSG00000100906|ENST00000216797|NFKBIA', 'ENST00000555371.1_1_14:35871898-35872434:-|nuORF'] 137850 11755 YPIEHGIITN True PC9_epitope_Rep1 1155.5924235730297 1155.5913299358601 50.088 2 -0.04758542815865471 0.016712289295490564 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 129891 7990 VTLSWKPVQK True NCI_RA007_Epitope_Rep4 1184.6917436914798 1184.69008490379 37.498 3 -0.04764036746067916 0.016712289295490564 0.9438714419765777 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5', 'nc|ENSG00000166181|Q9BZZ5-2|API5', 'nc|ENSG00000166181|Q9BZZ5-1|API5', 'nc|ENSG00000166181|Q9BZZ5-5|API5'] 131947 15542 VYFSAAHAL True PC9_epitope_Rep1 977.4970666362098 977.49596993586 64.607 2 -0.04765262397976934 0.016712289295490564 0.9438714419765777 ['ZNF292-ORC3|2|fusion', 'ZNF292-ORC3|1|fusion', 'nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 28041 17812 FRDAFTQEL True PC9_epitope_Rep1 1125.54547338061 1125.54436993586 73.309 2 -0.04768463936941088 0.016712289295490564 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 59124 22510 LGELGLVDL True PC9_epitope_Rep2 927.5276980581499 927.5271449679301 92.074 1 -0.04769024498198804 0.016712289295490564 0.9438714419765777 ['ENST00000379619.5_1_2:28635552-28635666:+|nuORF'] 26893 21742 FLFSKFIEL True PC9_epitope_Rep4 1142.6375828603 1142.63648993586 91.825 2 -0.04772457004525235 0.016712289295490564 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF', 'ENST00000496932.1_1_1:43830369-43830754:-|nuORF', 'ENST00000468865.6_1_1:43829752-43830910:-|nuORF', 'ENST00000464204.5_1_1:43830107-43833598:-|nuORF'] 13336 5251 DM[Oxidation]ESVLRN True H1975_Epitope_Rep3 978.44404546762 978.44294993586 25.282 2 -0.04775586117592532 0.016712289295490564 0.9438714419765777 ['ENSG00000124570|ENST00000380539|SERPINB6'] 105563 20955 SVDSLTFSV True PC9_epitope_Rep5 953.47057710485 953.47002496793 85.663 1 -0.047810685672871896 0.016712289295490564 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'nc|ENSG00000198959|P21980-2|TGM2', 'ENST00000468262.5_1_20:36766485-36793648:-|nuORF', 'nc|ENSG00000198959|P21980-3|TGM2', 'ENST00000474777.1_1_20:36774930-36793648:-|nuORF'] 137638 23551 YLVYILNEL True PC9_epitope_Rep5 1138.6274120994199 1138.62687496793 95.573 1 -0.04784396981364666 0.016712289295490564 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 34091 12170 GPAAAFTAA True PC9_epitope_Rep5 775.38645355807 775.3859049679301 51.801 1 -0.04787389526760613 0.016712289295490564 0.9438714419765777 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 70635 4980 MAQTDPETND True PC9_epitope_Rep1 1120.43426824912 1120.4331699358602 24.015 2 -0.04788245028328383 0.016712289295490564 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 118100 9618 VATVSLPR True PC9_epitope_Rep5 841.5021520166499 841.50104993586 41.96 2 -0.04790973548867102 0.016732526549765373 0.9438714419765777 ['CON__P00761'] 36671 13436 GVLSDLTK True H1975_Epitope_Rep3 831.47018318203 831.46963496793 56.952 1 -0.04792348928661498 0.016750005144350474 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 48756 6537 KEQEPMPTV True H1975_Epitope_Rep3 1057.5113963710098 1057.51028993586 30.113 2 -0.04792969951610966 0.016750005144350474 0.9438714419765777 ['ENSG00000206053|ENST00000248098|JPT2', 'nc|ENSG00000206053|Q9H910-3|JPT2', 'nc|ENSG00000206053|Q9H910-2|JPT2', 'WDR18-HN1L|1|fusion'] 63255 17874 LPALAGVSA True PC9_epitope_Rep2 797.46470387877 797.4641549679301 74.054 1 -0.04795668468665231 0.016750005144350474 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 33149 17355 GKPSPGLVNL True PC9_epitope_Rep5 980.5654805492 980.56438993586 71.755 2 -0.04796652828931876 0.016750005144350474 0.9438714419765777 ['ENST00000592904.5_1_19:9524750-9525065:-|nuORF'] 27569 2664 FPPKPKDT True NCI_RA007_Epitope_Rep5 928.50181766348 928.50072993586 14.936 2 -0.04800602839044271 0.016750005144350474 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3', 'CON__ENSEMBL:ENSBTAP00000024466', 'CON__ENSEMBL:ENSBTAP00000024462'] 109741 9534 THGPPVQL True PC9_epitope_Rep5 847.45520182423 847.45410993586 41.631 2 -0.04802203543546862 0.016750005144350474 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 31776 12722 GELPAWAA True H1975_Epitope_Rep1 813.40210362221 813.4015549679301 53.992 1 -0.04803720659148433 0.016750005144350474 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 13909 8249 DRDSGGPVL True PC9_epitope_Rep1 914.4457593393399 914.44466993586 36.565 2 -0.048045075704150224 0.016750005144350474 0.9438714419765777 ['ENST00000471909.1_1_21:45217249-45223652:+|nuORF', 'ENST00000467112.5_1_21:45213150-45223652:+|nuORF', 'ENSG00000160214|ENST00000497547|RRP1'] 131765 14631 VYADQPHIF True PC9_epitope_Rep4 1088.52909504048 1088.5279899358602 64.207 2 -0.04805647465560144 0.016750005144350474 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 33406 19734 GLFPQLYR True PC9_epitope_Rep5 992.5443511817998 992.54324993586 80.953 2 -0.04817297762520645 0.01676954732510288 0.9438714419765777 ['nc|ENSG00000168658|Q502W6-2|VWA3B', 'nc|ENSG00000168658|Q502W6-8|VWA3B', 'ENST00000409460.5_1_2:98703705-98907168:+|nuORF', 'ENSG00000168658|ENST00000477737|VWA3B', 'nc|ENSG00000168658|Q502W6-6|VWA3B'] 88936 6262 REDEISPPPP True H1975_Epitope_Rep3 1135.5509526838698 1135.5503749679299 29.099 1 -0.04817698652759544 0.01676954732510288 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 105761 21030 SVIDIINGEA True PC9_epitope_Rep3 1029.5342399905699 1029.5331499358601 86.17 2 -0.04818171781007244 0.01676954732510288 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant'] 9469 15428 AVYDFFIGR True NCI_RA007_Epitope_Rep2 1086.5498304850598 1086.5487299358601 64.712 2 -0.048338577740515 0.016784942918852207 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 95280 21787 SADTTILFV True PC9_epitope_Rep3 965.50696261357 965.50586993586 89.102 2 -0.04841571345394086 0.016784942918852207 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1'] 70363 13489 LYQDGVFKF True NCI_RA007_Epitope_Rep4 1115.56514619603 1115.56404993586 59.096 2 -0.048439395369626125 0.016784942918852207 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 96996 18169 SEVNLFLVP True NCI_RA007_Epitope_Rep4 1016.5542471591599 1016.55314993586 78.626 2 -0.04845757619395271 0.016784942918852207 0.9438714419765777 ['ENSG00000105771|ENST00000270066|SMG9', 'nc|ENSG00000105771|Q9H0W8-2|SMG9'] 3865 14093 AHAVYQAML True PC9_epitope_Rep5 1002.4956867372199 1002.49458993586 59.22 2 -0.048468403595029075 0.016784942918852207 0.9438714419765777 ['ENST00000566127.1_1_16:29556504-29560080:-|nuORF', 'ENST00000529428.5_1_16:30296511-30300103:-|nuORF', 'ENST00000532337.1_1_16:29451232-29458344:-|nuORF'] 23863 13975 EYMEHVYLI True NCI_RA007_Epitope_Rep2 1195.5583465634297 1195.55724993586 59.016 2 -0.0485294320262736 0.016784942918852207 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'OSBPL2|p.R322Gfs*6|1|0.15|ENSG00000130703|chr20:62284136-62284136|G/-|frameshift_variant'] 107638 21279 TAIDILTTC True PC9_epitope_Rep5 949.4790336135701 949.47792993586 86.903 2 -0.048549278606594894 0.016784942918852207 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96948912-96949730:-|nuORF'] 108940 5339 TETQEKNPLP True H1975_Epitope_Rep3 1155.5771674317098 1155.57606993586 25.606 2 -0.04856676128677309 0.016784942918852207 0.9438714419765777 ['ENSG00000205542|ENST00000451311|TMSB4X', 'ENST00000402089.4_1_4:91760056-91760137:-|nuORF'] 29962 21361 FYAELYHII True PC9_epitope_Rep1 1167.59644632431 1167.5953499358602 86.997 2 -0.04864003088320323 0.016784942918852207 0.9438714419765777 ['ENSG00000100911|ENST00000216802|PSME2', 'ENST00000442824.1_1_5:97549420-97549822:+|nuORF', 'ENST00000559005.2_1_14:24612620-24612898:-|nuORF'] 128487 21956 VSFGDFVQV True PC9_epitope_Rep2 996.4916469025999 996.49109496793 89.93 1 -0.04866145568833818 0.016784942918852207 0.9438714419765777 ['ENSG00000166263|ENST00000376352|STXBP4', 'nc|ENSG00000166263|Q6ZWJ1-2|STXBP4'] 813 5124 ADALESPASP True H1975_Epitope_Rep3 956.445090633 956.44454496793 24.819 1 -0.048670514467658514 0.016784942918852207 0.9438714419765777 ['ENSG00000147324|ENST00000276282|MFHAS1'] 7069 7370 AQVRGGYVL True NCI_RA007_Epitope_Rep5 961.5345147740899 961.53340993586 35.029 2 -0.04870784836628726 0.016784942918852207 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 137900 6437 YPNSGSVSA True PC9_epitope_Rep4 880.39266113732 880.39156993586 31.855 2 -0.0487730711171999 0.016784942918852207 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 49318 8348 KIAELQTEFQK True NCI_RA007_Epitope_Rep1 1333.7241660185698 1333.7230699358602 36.471 2 -0.04877991101689594 0.016784942918852207 0.9438714419765777 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'nc|ENSG00000196275|Q86UP8-6|GTF2IRD2'] 139357 18395 YTDTGLWGLY True H1975_Epitope_Rep2 1187.5498900547097 1187.5487899358602 76.307 2 -0.048842788959829894 0.016784942918852207 0.9438714419765777 ['ENST00000453466.1_1_7:102939135-102952715:+|nuORF', 'ENST00000444457.5_1_7:102938385-102969496:+|nuORF', 'ENSG00000105819|ENST00000249269|PMPCB', 'ENST00000443722.5_1_7:102939135-102952660:+|nuORF'] 81258 12351 PPPLPPPPP True PC9_epitope_Rep5 907.51673945163 907.51564993586 52.501 2 -0.04885171377247415 0.016804475708585297 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000135723|ENST00000258201|FHOD1', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000122574|ENST00000242140|WIPF3', 'ENSG00000090470|ENST00000204549|PDCD7'] 75907 5161 NRDRTQIAL True PC9_epitope_Rep6 1085.59415490853 1085.59304993586 27.59 2 -0.0489388463770086 0.016804475708585297 0.9438714419765777 ['ENSG00000241685|ENST00000262942|ARPC1A'] 70482 20262 LYSPLAEQF True PC9_epitope_Rep4 1066.5335117145798 1066.5324099358602 86.081 2 -0.04895020770578797 0.016804475708585297 0.9438714419765777 ['ENSG00000103148|ENST00000611875|NPRL3'] 105511 19066 SVDEVEISV True PC9_epitope_Rep1 975.4760564081099 975.4755049679301 78.128 1 -0.048963958024393704 0.016822276148562496 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000556963.5_1_14:77924568-77929110:+|nuORF'] 84744 11146 QHGPPNIVV True PC9_epitope_Rep1 959.51886470995 959.51776993586 47.757 2 -0.04897763230129921 0.016822276148562496 0.9438714419765777 ['ENSG00000124209|ENST00000244040|RAB22A'] 134958 18443 YAFPKSITV True PC9_epitope_Rep1 1024.5593325395998 1024.55822993586 75.731 2 -0.04898040614391241 0.016822276148562496 0.9438714419765777 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1'] 38837 13201 HIGDAVVI True PC9_epitope_Rep1 822.4599528515 822.45884993586 55.641 2 -0.04898095367414036 0.016822276148562496 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 59642 9067 LGSLWQPDCR True NCI_RA007_Epitope_Rep1 1173.5600778989299 1173.5589899358602 39.272 2 -0.04898994838545413 0.016822276148562496 0.9438714419765777 ['ENST00000262494.12_3_16:56379319-56379799:+|nuORF'] 109550 4839 THAPATLEA True PC9_epitope_Rep4 909.45559574705 909.45448993586 25.198 2 -0.049009266043102455 0.016822276148562496 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 120911 21799 VGEEFQIVL True PC9_epitope_Rep3 1032.5491617787197 1032.5480699358602 89.148 2 -0.04901271159864066 0.016822276148562496 0.9438714419765777 ['ANTXR2|p.A359Cfs*13|1|0.21|ENSG00000163297|chr4:79984831-79984832|-/G|frameshift_variant', 'ENSG00000163297|ENST00000403729|ANTXR2', 'nc|ENSG00000163297|P58335|ANTXR2', 'nc|ENSG00000163297|P58335-3|ANTXR2'] 23251 7296 EVRKEGVAV True PC9_epitope_Rep2 985.5556441414898 985.55454993586 33.449 2 -0.049024564698333155 0.016822276148562496 0.9438714419765777 ['ENST00000441302.6_1_3:39139332-39139530:-|nuORF'] 12992 5683 DLQEPPPP True H1975_Epitope_Rep2 891.4337976733099 891.43270993586 26.858 2 -0.049119175274928976 0.016842494910235054 0.9438714419765777 ['ENSG00000142530|ENST00000600100|GARIN5A', 'nc|ENSG00000142530|Q6IPT2-2|GARIN5A'] 33193 8047 GKWGAKIVM True NCI_RA007_Epitope_Rep4 988.5528076905199 988.55170993586 37.721 2 -0.049153463567716806 0.016858552631578948 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 4275 19436 AIIQCEVV True PC9_epitope_Rep5 873.4629896266099 873.46188993586 79.811 2 -0.04920205120426897 0.016858552631578948 0.9438714419765777 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 53929 8368 KYISGPHEL True PC9_epitope_Rep5 1042.54474510462 1042.54364993586 37.131 2 -0.04923940715800585 0.016858552631578948 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 76850 20643 NVIDNLIVA True PC9_epitope_Rep4 969.5494961318899 969.5489449679301 87.56 1 -0.04924291154405477 0.016858552631578948 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 105030 9380 STIKTLEEA True PC9_epitope_Rep1 990.5233409536999 990.52224993586 40.938 2 -0.04927557642305739 0.016858552631578948 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 105711 10171 SVHKGFAFV True PC9_epitope_Rep2 990.5287011176598 990.52815496793 44.46 1 -0.04927836544960067 0.016858552631578948 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 107077 16992 SYLTSASSL True PC9_epitope_Rep2 927.45492704071 927.45382993586 70.609 2 -0.0492857661771797 0.016858552631578948 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 103712 5356 SREEGSPQL True PC9_epitope_Rep5 1001.47778774361 1001.47668993586 25.615 2 -0.049288375497241355 0.016858552631578948 0.9438714419765777 ['ENSG00000120278|ENST00000696526|PLEKHG1'] 1455 7071 AEEKNNWMAA True H1975_Epitope_Rep2 1162.5077079729 1162.50660993586 32.127 2 -0.04929376186977157 0.016858552631578948 0.9438714419765777 ['SOS1|p.E1074Kfs*32|1|0.33|ENSG00000115904|chr2:38995248-38995249|TC/-|frameshift_variant', 'ENSG00000115904|ENST00000402219|SOS1', 'SOS2|p.P1259*|1|0.09|ENSG00000100485|chr14:50118556-50118569|GAGGAGTGCTTGGC/-|frameshift_variant', 'ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 66810 21240 LSVPGLVSV True PC9_epitope_Rep2 869.52221875489 869.52167496793 87.158 1 -0.04930196600120231 0.016858552631578948 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 76272 10507 NSDPGLAVGY True H1975_Epitope_Rep1 991.46107505031 991.45996993586 45.369 2 -0.04930454491035104 0.016858552631578948 0.9438714419765777 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 128705 17048 VSPASFENV True PC9_epitope_Rep3 948.45526139388 948.45416993586 70.729 2 -0.04938032832426442 0.016858552631578948 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 47318 20423 IYGGTYML True PC9_epitope_Rep5 916.4364405255999 916.43589496793 83.592 1 -0.04943078798676725 0.016858552631578948 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2', 'ENST00000471972.1_1_X:153668686-153669692:+|nuORF', 'ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153669338-153669692:+|nuORF', 'ENST00000476540.1_1_X:153669338-153670248:+|nuORF'] 101741 14658 SPHGIIVIA True PC9_epitope_Rep5 905.5334521449299 905.53234993586 61.386 2 -0.049508626380050096 0.016872521013584333 0.9438714419765777 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 24436 13305 FAGM[Oxidation]PITL True H1975_Epitope_Rep2 864.44152628648 864.4409749679301 56.307 1 -0.04951680969097762 0.016872521013584333 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 117676 10431 VAKGGLGLI True PC9_epitope_Rep6 826.5276384884999 826.52654993586 50.876 2 -0.049543309216261835 0.016872521013584333 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10'] 102096 7935 SPPVPGPSA True PC9_epitope_Rep4 807.41266830591 807.41156993586 37.956 2 -0.049598951775486996 0.016872521013584333 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 70464 19164 LYSEVDVHF True PC9_epitope_Rep5 1107.52367530687 1107.52256993586 78.751 2 -0.04966508857920933 0.016872521013584333 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 39593 11994 HPKYSDMIVA True PC9_epitope_Rep5 1159.56957995347 1159.56848993586 51.13 2 -0.049679667950995175 0.016872521013584333 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 41909 8630 IEAELEKVA True H1975_Epitope_Rep1 1000.5440763982799 1000.54296993586 38.123 2 -0.04968080675672825 0.016872521013584333 0.9438714419765777 ['ENSG00000100604|ENST00000216492|CHGA'] 48382 3242 KEAPPMEKP True NCI_RA007_Epitope_Rep4 1025.52156713189 1025.52046993586 18.107 2 -0.04970209314226524 0.016872521013584333 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15'] 5931 10945 APHPPLSVV True PC9_epitope_Rep6 915.51780208079 915.51670993586 52.977 2 -0.04972029752202851 0.016872521013584333 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 87947 13047 QVQELFHEA True PC9_epitope_Rep5 1099.52982331647 1099.5287299358602 55.189 2 -0.049728894379354904 0.016872521013584333 0.9438714419765777 ['ENST00000481760.2_1_3:124925611-124930193:-|nuORF', 'ENSG00000221955|ENST00000469902|SLC12A8'] 85310 13721 QLAESVANV True PC9_epitope_Rep1 929.4818104948899 929.48070993586 57.626 2 -0.0497736471123954 0.016872521013584333 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 19201 19645 ELKPFIEEL True PC9_epitope_Rep6 1116.60667665484 1116.60556993586 88.223 2 -0.04980894266672063 0.016872521013584333 0.9438714419765777 ['ENST00000543815.5_1_6:131486241-131540820:+|nuORF', 'ENSG00000118507|ENST00000431975|AKAP7'] 14111 9486 DSDYHDENMYY True H1975_Epitope_Rep1 1450.49832505766 1450.49722993586 41.407 2 -0.049835541652708835 0.016872521013584333 0.9438714419765777 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'ENST00000551873.5_1_12:70671967-70723208:+|nuORF', 'ENST00000549443.5_1_12:70671967-70726591:+|nuORF', 'ENST00000548021.5_1_12:70671967-70729348:+|nuORF', 'ENST00000547321.5_1_12:70671967-70723393:+|nuORF', 'nc|ENSG00000111596|Q9NZN8-4|CNOT2'] 98632 19895 SIPEGALVAV True PC9_epitope_Rep2 954.5385970950199 954.53750993586 81.921 2 -0.04983692795427745 0.016872521013584333 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant'] 126875 13128 VPTNIIAA True PC9_epitope_Rep6 797.4647038787699 797.46360993586 62.129 2 -0.049869357677386754 0.016872521013584333 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 77365 24143 NYLPFIMEL True PC9_epitope_Rep1 1138.57326835158 1138.57216993586 97.679 2 -0.04991652960661826 0.016872521013584333 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 102979 6815 SQIRETQQL True PC9_epitope_Rep1 1101.5778361380499 1101.5767299358602 31.02 2 -0.04995956173716921 0.016872521013584333 0.9438714419765777 ['nc|ENSG00000186283|Q9H497-3|TOR3A', 'ENSG00000186283|ENST00000367627|TOR3A', 'ENST00000472001.1_1_1:179057051-179060848:+|nuORF', 'nc|ENSG00000186283|Q9H497-2|TOR3A', 'ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 77968 11267 PALGEAALA True H1975_Epitope_Rep2 811.4439684341899 811.44341496793 48.383 1 -0.04996334932386015 0.016872521013584333 0.9438714419765777 ['ENSG00000167378|ENST00000422989|IRGQ'] 105959 13361 SVLGKVNEI True PC9_epitope_Rep1 957.54949613189 957.54838993586 56.252 2 -0.04996858365495281 0.016872521013584333 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 106383 18276 SVSTQLSLV True PC9_epitope_Rep4 932.51786165044 932.51731496793 78.37 1 -0.050024473494193325 0.016910843076417284 0.9438714419765777 ['ENSG00000214194|ENST00000397764|SMIM30'] 118030 19708 VATDFFTVL True NCI_RA007_Epitope_Rep2 1011.5276980581499 1011.52717496793 81.609 1 -0.05003673450456691 0.016910843076417284 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 5505 14075 [Acetylation]-AM[Oxidation]VSEFLK True H1975_Epitope_Rep1 981.4841196907499 981.48357496793 59.306 1 -0.05006481215561642 0.016910843076417284 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000468639.5_1_9:75766818-75774345:+|nuORF'] 71142 8214 MEVASVAA True H1975_Epitope_Rep3 776.3738402690399 776.37274993586 36.578 2 -0.050086581122874084 0.016910843076417284 0.9438714419765777 ['ENST00000367188.4_1_1:204380617-204380770:-|nuORF'] 8698 9952 AVDEDRKMYL True PC9_epitope_Rep5 1238.5965229772999 1238.59486490379 43.255 3 -0.0500881104957238 0.016910843076417284 0.9438714419765777 ['ENSG00000108094|ENST00000374749|CUL2', 'nc|ENSG00000108094|Q13617-2|CUL2'] 36465 22382 GVISGLFEL True PC9_epitope_Rep4 933.5171333744499 933.51602993586 94.326 2 -0.050094184767440465 0.016910843076417284 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 58178 10485 LESLHSFVA True H1975_Epitope_Rep2 1001.51819600361 1001.51708993586 45.348 2 -0.05009620543986322 0.016910843076417284 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 35652 5324 GTMKAQGVLLK True NCI_RA007_Epitope_Rep5 1144.6638146914797 1144.66216490379 27.171 3 -0.05014967088422057 0.016910843076417284 0.9438714419765777 ['nc|ENSG00000166482|P55083-2|MFAP4'] 139528 19279 YTLDGGDIINA True PC9_epitope_Rep4 1150.5506183307 1150.55007496793 82.262 1 -0.05023351203965772 0.016930695103659413 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 35479 22289 GTFDIFYTA True PC9_epitope_Rep2 1033.4756624852898 1033.47456993586 91.213 2 -0.05024332718976022 0.016930695103659413 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 105025 4702 STIKEVAQA True PC9_epitope_Rep4 945.5131106231698 945.51200993586 24.627 2 -0.05025886823359648 0.016950197238658777 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 29730 15174 FVPQEMGVHTV True PC9_epitope_Rep1 1242.6066937381797 1242.60558993586 63.187 2 -0.0502771141506403 0.016950197238658777 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 60589 24563 LISDELLLD True PC9_epitope_Rep5 1029.55939210925 1029.55887496793 99.596 1 -0.05027881485375056 0.016950197238658777 0.9438714419765777 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 95964 5707 SEAATPPVA True H1975_Epitope_Rep2 841.4181476091699 841.4175949679301 26.948 1 -0.05028398312133307 0.016989543316145203 0.9438714419765777 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 88308 9769 QYLDRAEKL True PC9_epitope_Rep5 1134.6033226098998 1134.60166490379 42.548 3 -0.05029543304974411 0.016989543316145203 0.9438714419765777 ['ENSG00000132612|ENST00000254950|VPS4A'] 107177 11935 SYNPITHQL True PC9_epitope_Rep2 1071.5349086969102 1071.53380993586 51.23 2 -0.05030626490200932 0.016989543316145203 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122'] 47503 10015 IYLEKLKTI True NCI_RA007_Epitope_Rep4 1119.69034670915 1119.68924993586 45.367 2 -0.05034854342067003 0.016989543316145203 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 43244 13179 IHDFQPHVI True PC9_epitope_Rep3 1104.5716285588 1104.5705299358601 55.726 2 -0.05035992635574471 0.016989543316145203 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 134382 6269 WSQHYHQGYY True H1975_Epitope_Rep2 1367.56833408351 1367.56669490379 29.058 3 -0.050415109442330956 0.0170097374584001 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 41193 16148 IAAGIFNDL True NCI_RA007_Epitope_Rep3 932.4967322830399 932.49618496793 71.215 1 -0.05052834305432013 0.017070665571076418 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 102738 21144 SQDYPTLAF True PC9_epitope_Rep5 1040.48147614172 1040.48097496793 86.391 1 -0.05061010211982968 0.017070665571076418 0.9438714419765777 ['ENSG00000134697|ENST00000373062|GNL2'] 105547 7527 SVDPTQTEY True H1975_Epitope_Rep3 1038.45056993626 1038.4499749679298 33.934 1 -0.050657563253709306 0.017090505731071032 0.9438714419765777 ['nc|ENSG00000009307|O75534-2|CSDE1', 'ENSG00000009307|ENST00000358528|CSDE1', 'nc|ENSG00000009307|O75534-3|CSDE1', 'nc|ENSG00000009307|O75534-4|CSDE1', 'ENST00000483030.1_1_1:115263111-115268953:-|nuORF'] 77580 9530 NYSSAVQKF True PC9_epitope_Rep2 1042.5083595959 1042.5072699358602 42.005 2 -0.05068306376032282 0.017090505731071032 0.9438714419765777 ['ENSG00000079482|ENST00000355520|OPHN1', 'nc|ENSG00000079482|O60890-2|OPHN1'] 63802 8756 LPSQPPPAA True PC9_epitope_Rep1 876.4705175351999 876.46942993586 38.519 2 -0.05072172315838477 0.017108938547486033 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD'] 8464 18259 ATSVTFVGV True PC9_epitope_Rep4 879.4701831820299 879.46908993586 78.304 2 -0.050730611598856154 0.017108938547486033 0.9438714419765777 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF'] 67041 22719 LTAPPEALLMV True PC9_epitope_Rep1 1153.6416822645701 1153.6405899358601 92.193 2 -0.05074153618370578 0.017108938547486033 0.9438714419765777 ['ENSG00000184967|ENST00000330579|NOC4L', 'ENST00000538784.2_1_12:132635515-132636943:+|nuORF'] 63276 20163 LPAQPLPLSV True PC9_epitope_Rep4 1033.6171817688898 1033.6160899358601 85.695 2 -0.05077306956780662 0.017108938547486033 0.9438714419765777 ['ENSG00000074181|ENST00000263388|NOTCH3'] 76536 3424 NTDPHSQEY True H1975_Epitope_Rep1 1089.43631685445 1089.43520993586 17.364 2 -0.050786250782165365 0.017108938547486033 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 107762 16282 TAMDVVYAL True NCI_RA007_Epitope_Rep5 981.4841189940099 981.48357496793 69.386 1 -0.05079497440458431 0.017108938547486033 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'H4C3|p.T81I|2|0.56|ENSG00000197061|chr6:26104189-26104189|C/T|missense_variant', 'H4C5|p.R93T|2|0.43|ENSG00000276966|chr6:26204922-26204922|G/C|missense_variant'] 1219 14876 AEDGFFVPP True H1975_Epitope_Rep1 977.4494477374499 977.4488949679301 62.455 1 -0.05081955433324816 0.0171284220903247 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 26299 7026 FIDRPSTY True H1975_Epitope_Rep1 997.48689587533 997.48578993586 32.06 2 -0.05089218891096403 0.0171284220903247 0.9438714419765777 ['nc|ENSG00000151364|Q9BQ13-2|KCTD14', 'ENSG00000151364|ENST00000353172|KCTD14'] 83839 13187 QEFRFLPPP True NCI_RA007_Epitope_Rep4 1129.5920296502097 1129.59092993586 57.837 2 -0.050896708962977606 0.0171284220903247 0.9438714419765777 ['ENSG00000113369|ENST00000265138|ARRDC3'] 2960 15756 AFIEKHWTF True PC9_epitope_Rep4 1177.59202965021 1177.5903749037902 68.529 3 -0.050928848070134584 0.01714825539605282 0.9438714419765777 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 13228 8094 DLTREGGSIP True NCI_RA007_Epitope_Rep4 1043.5247379360299 1043.52364993586 37.919 2 -0.05093164424738404 0.01714825539605282 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 6253 6966 APRLQSEVA True PC9_epitope_Rep5 969.5243440132099 969.52324993586 31.762 2 -0.051018982891467356 0.017167381974248927 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 71768 11047 MNFKTPRGPV True PC9_epitope_Rep3 1145.60154878809 1145.59990490379 47.486 3 -0.05105028330194256 0.017167381974248927 0.9438714419765777 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561157.5_1_15:83205554-83205662:-|nuORF', 'ENST00000558397.1_1_15:83205554-83206687:-|nuORF'] 39842 6602 HQGGPAVAL True PC9_epitope_Rep6 848.4504507969599 848.44934993586 34.102 2 -0.051112232486023625 0.017167381974248927 0.9438714419765777 ['ENSG00000231274|ENST00000612221|SBK3'] 8166 14177 [Acetylation]-ATFVELSTK True H1975_Epitope_Rep3 1036.54407671458 1036.54357496793 59.867 1 -0.05112932260373005 0.017167381974248927 0.9438714419765777 ['ENSG00000198074|ENST00000359579|AKR1B10', 'nc|ENSG00000227471|C9JRZ8|AKR1B15'] 125292 21420 VLRSALLIL True PC9_epitope_Rep4 996.6695516949198 996.6684499358599 90.569 2 -0.05115390311494059 0.01718615251940372 0.9438714419765777 ['ENSG00000278870|ENST00000623849|OR51G1'] 71947 19015 MPTLPPPSV True PC9_epitope_Rep5 937.49428975489 937.49318993586 78.167 2 -0.05117618837648707 0.01718615251940372 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 115806 13326 TVMDEIHTV True PC9_epitope_Rep6 1043.49574630687 1043.49464993586 62.916 2 -0.0511825444168038 0.01718615251940372 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 1212 6624 AEDEPPAPP True H1975_Epitope_Rep3 921.4079768482899 921.4074249679301 30.431 1 -0.051195864378032446 0.01718615251940372 0.9438714419765777 ['ENSG00000162783|ENST00000367577|IER5'] 94876 20036 RYNPRILFQL True PC9_epitope_Rep5 1318.7509899031 1318.74934490379 82.12 3 -0.051197318097660136 0.01718615251940372 0.9438714419765777 ['ENSG00000164961|ENST00000318410|WASHC5', 'WASHC5|p.Y1056Tfs*28|1|0.3|ENSG00000164961|chr8:125037249-125037252|TGTA/-|frameshift_variant'] 48387 4696 KEAVTTIAA True H1975_Epitope_Rep2 902.5072969667399 902.50618993586 23.157 2 -0.0512016903748776 0.017204212773820032 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 72031 18025 MQMSPALTC True PC9_epitope_Rep5 980.4129452830399 980.41239496793 74.349 1 -0.05120401443606461 0.017204212773820032 0.9438714419765777 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 108270 5667 TEAREAALP True H1975_Epitope_Rep2 956.4927095317598 956.49160993586 26.795 2 -0.051237671105077286 0.017204212773820032 0.9438714419765777 ['ENST00000314845.7_1_11:46418495-46418936:-|nuORF'] 45693 16599 ISLGEGHLSV True PC9_epitope_Rep5 1010.5396597241801 1010.53856993586 68.853 2 -0.051249902853083625 0.017204212773820032 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK'] 48728 7027 KENPYEDIP True H1975_Epitope_Rep2 1103.51350454599 1103.5124099358602 31.954 2 -0.051250457505361134 0.017204212773820032 0.9438714419765777 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C', 'ENST00000481894.1_1_1:115138166-115167938:-|nuORF'] 35542 15593 GTIGLIHAI True PC9_epitope_Rep6 893.53345214493 893.53234993586 72.187 2 -0.05134356175417319 0.017204212773820032 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 24485 18003 FAIPGSSFL True H1975_Epitope_Rep3 937.49091862661 937.49037496793 75.413 1 -0.05135457817587357 0.017204212773820032 0.9438714419765777 ['ENST00000467061.1_1_3:185214522-185216779:-|nuORF', 'ENST00000475480.5_1_3:185199046-185216749:-|nuORF', 'ENSG00000163900|ENST00000421852|TMEM41A'] 80659 16508 PLPPPLPPP True PC9_epitope_Rep6 923.54803957991 923.54694993586 75.93 2 -0.05137418421350144 0.01724385687598793 0.9438714419765777 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 40072 5725 HRAPVVAIA True PC9_epitope_Rep4 932.5555845718399 932.55448993586 28.846 2 -0.051383483030874 0.01724385687598793 0.9438714419765777 ['ENSG00000131899|ENST00000316843|LLGL1'] 48774 8236 KEQLPPLAAA True H1975_Epitope_Rep1 1036.5916952970397 1036.5905899358602 36.622 2 -0.05139043454772043 0.01724385687598793 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 26894 22835 FLFSKFIEL True PC9_epitope_Rep5 1142.6375828603 1142.63648993586 92.83 2 -0.051393367725178156 0.01724385687598793 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF', 'ENST00000496932.1_1_1:43830369-43830754:-|nuORF', 'ENST00000468865.6_1_1:43829752-43830910:-|nuORF', 'ENST00000464204.5_1_1:43830107-43833598:-|nuORF'] 131642 22195 VWFPDMMPTW True NCI_RA007_Epitope_Rep1 1308.5671374253197 1308.5660299358601 90.916 2 -0.051441403122734874 0.01726084190218172 0.9438714419765777 ['ENSG00000005812|ENST00000355619|FBXL3'] 138224 15823 YQTEIGQTL True PC9_epitope_Rep2 1051.51858992643 1051.51807496793 66.122 1 -0.051468563221113255 0.01726084190218172 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000453932.1_1_7:76099481-76100288:-|nuORF'] 13970 7609 DRNLQVSL True PC9_epitope_Rep1 943.50869394907 943.50758993586 34.088 2 -0.051475161975795734 0.01726084190218172 0.9438714419765777 ['ENSG00000142959|ENST00000372207|BEST4', 'ENST00000524877.5_1_11:61726936-61727579:+|nuORF', 'nc|ENSG00000127325|Q8N1M1-1|BEST3', 'ENSG00000167995|ENST00000378043|BEST1', 'nc|ENSG00000127325|Q8N1M1-5|BEST3', 'nc|ENSG00000127325|Q8N1M1-6|BEST3', 'ENSG00000127325|ENST00000330891|BEST3', 'nc|ENSG00000167995|O76090-3|BEST1'] 105410 10164 SVAEKLSKL True PC9_epitope_Rep5 973.5807962601699 973.57968993586 44.083 2 -0.05148140091202872 0.01726084190218172 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 109546 5297 THAPATLEA True PC9_epitope_Rep2 909.45559574705 909.45448993586 25.762 2 -0.05152726672130848 0.01726084190218172 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 3747 5728 AGTAGGAEVAP True H1975_Epitope_Rep2 899.4348603024699 899.43376993586 27.031 2 -0.051547389970095094 0.01726084190218172 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 120888 7520 VGDVTGAQAY True H1975_Epitope_Rep1 979.4610750503098 979.46052496793 33.923 1 -0.0516504366728102 0.01726084190218172 0.9438714419765777 ['ENSG00000185201|ENST00000616316|IFITM2', 'ENST00000527146.1_2_11:308871-309162:+|nuORF', 'ENSG00000185885|ENST00000408968|IFITM1', 'ENSG00000142089|ENST00000399808|IFITM3'] 132578 22418 VYPNWAIGL True PC9_epitope_Rep3 1031.5440168286298 1031.54347496793 91.508 1 -0.05165177900527036 0.01726084190218172 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 64090 11436 LQEDPPAGV True PC9_epitope_Rep3 924.4552613938798 924.45416993586 48.987 2 -0.05167320147115722 0.01726084190218172 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 112327 17580 TMLGKFYHF True PC9_epitope_Rep2 1142.55828699378 1142.5566449037901 72.899 3 -0.05168244127172888 0.01726084190218172 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 124922 15501 VLLTGLHAV True PC9_epitope_Rep4 921.5647522732099 921.56364993586 67.55 2 -0.051697257647225894 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3', 'ENST00000477675.1_1_22:22055420-22058252:-|nuORF', 'ENSG00000175155|ENST00000312655|YPEL2', 'ENSG00000100027|ENST00000339468|YPEL1'] 23559 19279 EYAKTFGYTF True PC9_epitope_Rep3 1225.5655401188499 1225.56444993586 79.378 2 -0.051718757685223736 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 24584 23691 FALSGPLFL True PC9_epitope_Rep1 963.5429541994699 963.54184993586 95.921 2 -0.051722792088658875 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 20344 12249 EPGFSEVLP True H1975_Epitope_Rep3 973.4756624852898 973.47511496793 52.293 1 -0.05174389889633984 0.017275338530980715 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 30814 10132 GAPQVVAVTG True PC9_epitope_Rep3 897.4919812557698 897.49088993586 43.924 2 -0.05174720877422029 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF'] 120118 21104 VFIGNLNTL True PC9_epitope_Rep2 989.55458151233 989.55348993586 86.635 2 -0.051775479659967344 0.017275338530980715 0.9438714419765777 ['ENSG00000092199|ENST00000553300|HNRNPC', 'nc|ENSG00000092199|P07910|HNRNPC', 'nc|ENSG00000092199|P07910-4|HNRNPC', 'nc|ENSG00000092199|P07910-3|HNRNPC', 'ENSG00000277058|ENST00000617807|HNRNPCL3', 'ENSG00000275774|ENST00000621994|HNRNPCL2', 'ENSG00000179412|ENST00000323770|HNRNPCL4', 'ENSG00000179172|ENST00000317869|HNRNPCL1', 'ENST00000556181.1_1_14:58987979-58988105:+|nuORF'] 115066 16041 TTSDIDYAL True PC9_epitope_Rep6 997.46040634397 997.45930993586 74.026 2 -0.05177852373653118 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 5986 17490 APLAIPSAAAA True PC9_epitope_Rep1 951.5389314481899 951.53782993586 72.069 2 -0.05179904214703784 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 17672 12502 EHSGPPIVI True PC9_epitope_Rep4 947.5076313199099 947.50652993586 55.901 2 -0.051846645797651775 0.017275338530980715 0.9438714419765777 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 117467 17969 VAEAALDLA True PC9_epitope_Rep6 871.4650978015899 871.46454496793 81.746 1 -0.05185159740636876 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'nc|ENSG00000007174|Q9NYC9-3|DNAH9', 'ENST00000581682.1_1_17:11787806-11828539:+|nuORF'] 102718 10650 SQDSTAVAL True PC9_epitope_Rep4 890.4345259492999 890.43397496793 48.715 1 -0.05186804113295419 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 54137 16968 KYNANFVTF True PC9_epitope_Rep2 1102.54474510462 1102.5441749679298 70.515 1 -0.051890850307311345 0.017275338530980715 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 120548 18838 VGAANLPQV True PC9_epitope_Rep1 867.4814165720699 867.4808649679301 77.245 1 -0.0519549506755194 0.017275338530980715 0.9438714419765777 ['ENST00000550513.1_1_12:53689756-53691495:+|nuORF'] 119946 11168 VEYGGTMTDP True PC9_epitope_Rep1 1068.44337638084 1068.4422699358602 47.843 2 -0.051998373566330795 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000100003|O76054-5|SEC14L2', 'nc|ENSG00000100003|O76054-4|SEC14L2', 'ENSG00000100003|ENST00000615189|SEC14L2'] 131966 14808 VYGDFQEAF True NCI_RA007_Epitope_Rep5 1074.4658260775798 1074.46472993586 63.631 2 -0.05200279063533455 0.017275338530980715 0.9438714419765777 ['nc|ENSG00000112773|Q96IP4-2|TENT5A', 'ENSG00000112773|ENST00000320172|TENT5A'] 102643 15914 SQDFPGSNL True PC9_epitope_Rep2 963.42977492203 963.42922496793 66.465 1 -0.052006312727027354 0.017275338530980715 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2', 'ENST00000556491.1_1_14:68086736-68113430:+|nuORF'] 90700 5702 RKMAQAVTL True NCI_RA007_Epitope_Rep4 1016.5800850675199 1016.57898993586 28.546 2 -0.052031359008463285 0.017275338530980715 0.9438714419765777 ['ENSG00000157978|ENST00000374338|LDLRAP1', 'LDLRAP1|p.S202Pfs*2|1|0.48|ENSG00000157978|chr1:25563141-25563141|T/-|frameshift_variant', 'ENST00000488127.1_1_1:25880414-25890333:+|nuORF'] 5127 21107 ALMPVLNQV True PC9_epitope_Rep3 983.54738795691 983.54628993586 86.469 2 -0.05208063688221331 0.017293017149421514 0.9438714419765777 ['ENSG00000223496|ENST00000435634|EXOSC6'] 36775 9447 GVPENGYQTLY True H1975_Epitope_Rep3 1239.5771674317102 1239.57606993586 41.341 2 -0.05217123806061715 0.017293017149421514 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 95616 11698 SATSLLHTV True PC9_epitope_Rep4 927.5025459394701 927.50144993586 52.758 2 -0.05218502441007827 0.017293017149421514 0.9438714419765777 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 9476 7542 AVYEGHVSC True PC9_epitope_Rep1 963.4120166829099 963.41090993586 33.828 2 -0.05220079064188593 0.017293017149421514 0.9438714419765777 ['ENSG00000105887|ENST00000393085|MTPN'] 126393 13988 VPLGPGQISA True PC9_epitope_Rep6 937.5232813840499 937.52218993586 65.661 2 -0.05221117069285873 0.017293017149421514 0.9438714419765777 ['nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 30035 18067 FYIHEVQEL True PC9_epitope_Rep2 1176.5815245361598 1176.5804299358601 74.797 2 -0.052217893531846436 0.017293017149421514 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000460168.1_1_10:69726418-69749980:-|nuORF'] 47078 4519 IVVEQMNKYK True NCI_RA007_Epitope_Rep2 1250.66929399474 1250.66818993586 22.209 2 -0.0522505731656747 0.017293017149421514 0.9438714419765777 ['nc|ENSG00000066933|B2RTY4-5|MYO9A', 'nc|ENSG00000066933|B2RTY4-2|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A'] 131986 17216 VYGIRLEHF True PC9_epitope_Rep1 1132.60292868708 1132.60129490379 71.039 3 -0.05227423861767284 0.017293017149421514 0.9438714419765777 ['ENST00000490881.5_1_1:163291794-163297702:+|nuORF', 'ENST00000487578.2_1_1:163295841-163298095:+|nuORF', 'ENSG00000143228|ENST00000271452|NUF2'] 140433 19944 YYFEGIKQTF True PC9_epitope_Rep5 1294.6233893481397 1294.6217549037901 81.77 3 -0.05231036154491762 0.01733120026253179 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 1737 7449 AEGSTYVP True H1975_Epitope_Rep2 822.3759484440199 822.3753949679301 33.597 1 -0.052317779035626635 0.01733120026253179 0.9438714419765777 ['ENSG00000170759|ENST00000302418|KIF5B', 'KIF5B|p.E334Gfs*12|1|0.31|ENSG00000170759|chr10:32034800-32034801|-/C|frameshift_variant'] 135398 7951 YDNEFGYSNR True NCI_RA007_Epitope_Rep1 1263.5156298043098 1263.5150749679299 34.92 1 -0.052324064233343175 0.01733120026253179 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'chr12:6537216-6538101|251|78.77|0.54|7.19|+|1|GAPDH,GAPDH|1'] 78302 7821 PASGPIRPIVR True PC9_epitope_Rep5 1161.6982260542497 1161.6965849037902 35.028 3 -0.05233530266414831 0.01733120026253179 0.9438714419765777 ['ENSG00000167526|ENST00000311528|RPL13', 'ENST00000565571.5_1_16:89627367-89628201:+|nuORF', 'nc|ENSG00000167526|P26373-2|RPL13', 'ENST00000484610.5_1_16:89627367-89627911:+|nuORF', 'ENST00000399461.8_1_16:89627605-89629447:+|nuORF', 'ENST00000563749.1_1_16:89627605-89627911:+|nuORF'] 100184 20919 SLLGGDVVSV True PC9_epitope_Rep5 944.51786165044 944.51731496793 85.521 1 -0.05247602433561206 0.01733120026253179 0.9438714419765777 ['nc|ENSG00000157514|Q99576|TSC22D3'] 665 13570 AATTVLQEL True NCI_RA007_Epitope_Rep4 944.5178616504398 944.51676993586 59.403 2 -0.052504200388467745 0.01733120026253179 0.9438714419765777 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-6|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'nc|ENSG00000040341|Q9NUL3-4|STAU2'] 58179 10367 LESLHSFVA True H1975_Epitope_Rep3 1001.51819600361 1001.51708993586 44.931 2 -0.05250658743134204 0.01733120026253179 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 124934 8943 VLLVPGPEKEN True H1975_Epitope_Rep3 1193.6655885132898 1193.66448993586 39.396 2 -0.052513488476453055 0.01733120026253179 0.9438714419765777 ['nc|ENSG00000108828|Q99536-2|VAT1', 'nc|ENSG00000108828|Q99536-3|VAT1', 'ENSG00000108828|ENST00000355653|VAT1'] 5836 6545 APGGFVHSA True PC9_epitope_Rep5 841.40825163181 841.40714993586 30.148 2 -0.052558044348468246 0.017349575489110373 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 47256 15161 IYEPLHTHW True PC9_epitope_Rep5 1194.5821932425 1194.58054490379 63.323 3 -0.052559915910176606 0.017349575489110373 0.9438714419765777 ['ENSG00000182749|ENST00000675840|PAQR7'] 107231 10527 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59143490379 45.382 3 -0.05259885229993509 0.017349575489110373 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 132488 8195 VYPEKLATKF True NCI_RA007_Epitope_Rep4 1194.6648602372995 1194.66322490379 38.31 3 -0.0526307194230767 0.017349575489110373 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 44909 9901 IQDNKFIEA True PC9_epitope_Rep4 1076.55022440788 1076.54912993586 45.736 2 -0.05263916172991012 0.017349575489110373 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 135008 11288 YAGSGNVL True PC9_epitope_Rep3 779.38136817763 779.3808149679301 48.425 1 -0.0526732313125443 0.017349575489110373 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 105474 15658 SVASTITGV True PC9_epitope_Rep1 833.44944773745 833.44834993586 65.048 2 -0.052746016475000546 0.017369370847346403 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 42265 8571 IEIAKNYNV True H1975_Epitope_Rep3 1062.57095985246 1062.5698699358602 37.959 2 -0.052747478276697395 0.017369370847346403 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'nc|ENSG00000182149|P53990-6|IST1', 'ENST00000545388.2_1_16:71955203-71956613:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'ENST00000587765.1_1_19:38282860-38283352:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 24027 17868 EYPRETFSF True PC9_epitope_Rep2 1174.5294889632999 1174.52838993586 74.032 2 -0.05275664069544461 0.01738809489634809 0.9438714419765777 ['ENST00000473682.5_1_1:111740397-111743081:-|nuORF', 'nc|ENSG00000162777|Q9H6A0-2|DENND2D', 'ENSG00000162777|ENST00000357640|DENND2D'] 126782 16637 VPSPGLPVSA True PC9_epitope_Rep1 922.5123823471799 922.5118349679301 68.824 1 -0.05275752374949884 0.01738809489634809 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 6494 10469 APTLPGSAA True PC9_epitope_Rep5 783.41266830591 783.41211496793 45.255 1 -0.05276675736521824 0.01738809489634809 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 77119 5616 NYARGHYTI True PC9_epitope_Rep2 1093.5304920228102 1093.52938993586 26.988 2 -0.05278316857476213 0.01738809489634809 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 109740 8390 THGPPVQL True PC9_epitope_Rep4 847.45520182423 847.45410993586 39.734 2 -0.05280317392117374 0.01738809489634809 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 71090 6589 METAAAVAA True NCI_RA007_Epitope_Rep4 833.3953039896098 833.39420993586 31.97 2 -0.052856829517941954 0.017424102658713077 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 24640 11240 FASGAVEL True H1975_Epitope_Rep2 792.40176926904 792.40122496793 48.277 1 -0.052871355902162145 0.017424102658713077 0.9438714419765777 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF', 'ENSG00000123600|ENST00000375258|METTL8', 'nc|ENSG00000123600|Q9H825-2|METTL8', 'nc|ENSG00000123600|Q9H825|METTL8', 'ENST00000428182.2_1_12:15408356-15408710:-|nuORF'] 85511 7530 QLIVGVNK True PC9_epitope_Rep6 869.53345214493 869.53234993586 38.225 2 -0.05287975996202197 0.017424102658713077 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 97748 11061 SHGNPILL True PC9_epitope_Rep4 849.47085188837 849.46974993586 50.323 2 -0.05288193755322283 0.017424102658713077 0.9438714419765777 ['NT5E|p.E409Rfs*15|1|0.41|ENSG00000135318|chr6:85490520-85490520|G/-|frameshift_variant', 'nc|ENSG00000135318|P21589-2|NT5E', 'ENSG00000135318|ENST00000257770|NT5E'] 105371 6994 STYRDFQQA True PC9_epitope_Rep2 1114.50433684462 1114.5032299358602 32.299 2 -0.05288628812732786 0.017424102658713077 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 8881 14452 AVFVRGVGV True PC9_epitope_Rep3 902.5337864980997 902.53268993586 60.694 2 -0.052896166248331204 0.017424102658713077 0.9438714419765777 ['ENST00000232458.9_1_3:172468581-172468611:+|nuORF'] 6418 13188 APSGNFVAC True PC9_epitope_Rep3 864.37998827864 864.37888993586 55.764 2 -0.05289738291075086 0.017424102658713077 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 125116 16636 VLPKLYVKL True PC9_epitope_Rep2 1071.7056028504699 1071.7045099358602 69.236 2 -0.05290583749152213 0.017424102658713077 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000471178.2_1_19:35024355-35024547:-|nuORF', 'ENST00000444468.1_1_X:128542382-128542532:+|nuORF'] 115574 8513 TVIAKVNNV True PC9_epitope_Rep5 956.5654805492 956.56438993586 37.687 2 -0.052915164240946694 0.017424102658713077 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 134289 20734 WRSLPLLPV True PC9_epitope_Rep5 1079.64915060351 1079.6480499358602 84.812 2 -0.05293367303862725 0.017424102658713077 0.9438714419765777 ['ENST00000402802.7_1_7:536981-537197:-|nuORF'] 47371 16194 IYIAGHPAF True PC9_epitope_Rep3 987.51780208079 987.51670993586 67.43 2 -0.05293393557730272 0.017424102658713077 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 87622 11753 QTVAVGVIKA True PC9_epitope_Rep1 984.5967806774798 984.59568993586 50.081 2 -0.052959097863675426 0.017424102658713077 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 6415 13160 APSGNFVAC True PC9_epitope_Rep1 864.37998827864 864.37888993586 55.484 2 -0.052959108001940036 0.017424102658713077 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 70411 23701 LYQILQGIVF True PC9_epitope_Rep3 1192.6855956818797 1192.68448993586 96.452 2 -0.05295973540159137 0.017424102658713077 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 42424 15778 IEQEGYWLP True H1975_Epitope_Rep1 1133.53932537101 1133.5387749679298 65.997 1 -0.05298479472731253 0.017440668934705087 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 7783 7895 ASVPKVETV True PC9_epitope_Rep4 928.52294703088 928.52184993586 37.797 2 -0.05300702217986663 0.017440668934705087 0.9438714419765777 ['ENSG00000100664|ENST00000216554|EIF5'] 8653 10700 AVARGLPGV True PC9_epitope_Rep5 838.5024863698198 838.50138993586 46.147 2 -0.05304911748961914 0.017440668934705087 0.9438714419765777 ['ENST00000373087.6_1_1:37940193-37941091:+|nuORF'] 33022 12262 GIYRANRWHL True PC9_epitope_Rep1 1284.68397297244 1284.68233490379 52.027 3 -0.0530831634573087 0.017440668934705087 0.9438714419765777 ['nc|nan|Q9H3H3-1|C11orf68', 'nc|nan|Q9H3H3|C11orf68', 'ENSG00000175573|ENST00000438576|C11orf68'] 140618 13120 YYNKVSTVF True PC9_epitope_Rep4 1119.5600608155898 1119.5589699358602 58.36 2 -0.05309831442788032 0.017440668934705087 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 76282 10514 NSDPNLHLL True NCI_RA007_Epitope_Rep4 1021.5192586327701 1021.51816993586 47.29 2 -0.05310137184590844 0.017440668934705087 0.9438714419765777 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 75050 5344 NM[Oxidation]EADPGQY True H1975_Epitope_Rep2 1039.3916755415898 1039.3905699358602 25.603 2 -0.05310700425765013 0.017440668934705087 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'ENSG00000172270|ENST00000333511|BSG', 'nc|ENSG00000172270|P35613-4|BSG', 'nc|ENSG00000172270|P35613-3|BSG'] 29153 8409 FTVGEGIR True NCI_RA007_Epitope_Rep2 877.4657665079299 877.46466993586 37.35 2 -0.05311280381084691 0.017440668934705087 0.9438714419765777 ['ENSG00000205038|ENST00000378402|PKHD1L1', 'PKHD1L1|p.G3595Efs*3|1|0.42|ENSG00000205038|chr8:109498726-109498726|G/-|frameshift_variant', 'PKHD1L1|p.S3970Mfs*9|1|0.26|ENSG00000205038|chr8:109518386-109518386|G/-|frameshift_variant'] 26632 21769 FLAALALYLL True PC9_epitope_Rep5 1106.6739683690198 1106.67286993586 88.763 2 -0.0531155922303626 0.017440668934705087 0.9438714419765777 ['ENSG00000110628|ENST00000649076|SLC22A18'] 85509 7996 QLIVGVNK True PC9_epitope_Rep4 869.53345214493 869.53234993586 38.207 2 -0.053143054351638366 0.017440668934705087 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 120681 11236 VGAPKIPSV True PC9_epitope_Rep6 866.5225531080599 866.52144993586 54.216 2 -0.053145182507936296 0.017440668934705087 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 112846 16525 TPMSVLQQA True PC9_epitope_Rep2 973.49026700361 973.48916993586 68.803 2 -0.05315964779399304 0.01746008975961637 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant'] 86952 10005 QRVDPDVL True PC9_epitope_Rep2 940.4977949121999 940.49668993586 43.813 2 -0.05316812236033055 0.01746008975961637 0.9438714419765777 ['BTG3|p.P193Afs*29|1|0.14|ENSG00000154640|chr21:17594276-17594277|-/T|frameshift_variant', 'ENSG00000154640|ENST00000348354|BTG3', 'nc|ENSG00000154640|Q14201-2|BTG3'] 32355 15074 GGDDSFNTF True PC9_epitope_Rep6 958.3668403123 958.36574993586 70.036 2 -0.05319243655566836 0.01746008975961637 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 66905 19416 LSWRLCFNQVL True PC9_epitope_Rep5 1377.72272654993 1377.7216299358602 79.732 2 -0.053264974375336685 0.01747986639070473 0.9438714419765777 ['ENST00000382044.8_1_15:43699501-43699630:-|nuORF'] 5846 7593 APGIPRKD True PC9_epitope_Rep5 852.4817509252399 852.48064993586 34.156 2 -0.05327537228011671 0.01747986639070473 0.9438714419765777 ['ENST00000567570.5_3_15:75182414-75182582:+|nuORF'] 63169 9355 LNSVVQSV True PC9_epitope_Rep1 844.4654321547599 844.46432993586 40.842 2 -0.05327872687683706 0.017493905811500093 0.9438714419765777 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 1314 6550 AEEAARKLLP True H1975_Epitope_Rep2 1096.62405805448 1096.62296993586 30.105 2 -0.053279844637539445 0.017493905811500093 0.9438714419765777 ['ENSG00000088298|ENST00000374492|EDEM2', 'nc|ENSG00000088298|Q9BV94-2|EDEM2'] 112841 17764 TPMPPISSV True PC9_epitope_Rep5 927.47355431031 927.47244993586 73.347 2 -0.05331503191434906 0.017493905811500093 0.9438714419765777 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 4008 12160 AHGVSLVL True PC9_epitope_Rep6 794.46503823194 794.46394993586 58.13 2 -0.05334228467239083 0.017493905811500093 0.9438714419765777 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 53515 16375 KVPEIEVTV True PC9_epitope_Rep1 1012.5804619069999 1012.57936993586 67.808 2 -0.05335197375231741 0.017493905811500093 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 87300 22173 QSVDLVFPV True PC9_epitope_Rep5 1002.5385970950199 1002.53807496793 90.326 1 -0.05336328051365965 0.017493905811500093 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1', 'nc|ENSG00000166452|Q9NQ31-3|AKIP1'] 11618 12480 DHARTITVAL True PC9_epitope_Rep3 1095.60365696307 1095.60254993586 53.03 2 -0.05337791631105274 0.017493905811500093 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 34572 10225 GQFTGSTGV True PC9_epitope_Rep1 852.3977465177599 852.3971949679301 44.211 1 -0.053380087138897615 0.017493905811500093 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 87620 8246 QTVAVGVIK True PC9_epitope_Rep4 913.5596668927699 913.55856993586 39.179 2 -0.05338620343699085 0.017493905811500093 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF', 'ENST00000567658.1_1_16:27144806-27145163:-|nuORF'] 20231 21625 ENVLAIISL True PC9_epitope_Rep3 970.5698972233 970.5693449679301 88.479 1 -0.05346267351475219 0.017493905811500093 0.9438714419765777 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000582313.5_1_18:245829-268019:-|nuORF', 'nc|ENSG00000079134|Q96FV9-2|THOC1'] 31810 9779 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43098993586 42.602 2 -0.05347341672969128 0.017493905811500093 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 25810 20131 FGANAILGV True PC9_epitope_Rep4 860.4756029156399 860.4745099358599 85.57 2 -0.05348033350327163 0.017493905811500093 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 128533 11368 VSGSTGILS True H1975_Epitope_Rep2 819.4337976733101 819.43324496793 48.777 1 -0.05348220839707998 0.017493905811500093 0.9438714419765777 ['nc|ENSG00000100336|Q9BPW4-3|APOL4', 'ENSG00000100336|ENST00000683024|APOL4', 'nc|ENSG00000100336|Q9BPW4|APOL4'] 132501 6100 VYPERSTSY True PC9_epitope_Rep2 1100.51383889916 1100.51274993586 28.856 2 -0.05348817015572675 0.017493905811500093 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 109208 12093 TFTFSHATF True NCI_RA007_Epitope_Rep4 1057.4868958753298 1057.48578993586 53.514 2 -0.05351095359439935 0.017493905811500093 0.9438714419765777 ['ENSG00000204713|ENST00000377199|TRIM27'] 114962 18346 TTIGDITLS True PC9_epitope_Rep4 919.4862271689901 919.48512993586 78.635 2 -0.05362296986548106 0.017493905811500093 0.9438714419765777 ['ENST00000462363.6_1_1:198608398-198672548:+|nuORF'] 77802 19199 PAEPAFLA True PC9_epitope_Rep2 814.4225047136199 814.42140993586 79.22 2 -0.05363669806640859 0.017493905811500093 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 137635 23347 YLVYILNEL True PC9_epitope_Rep2 1138.6274120994199 1138.62687496793 95.279 1 -0.053638813776142935 0.017493905811500093 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47'] 135934 12138 YEWVNPAA True H1975_Epitope_Rep2 948.4341320264798 948.43302993586 51.773 2 -0.05364989024674635 0.017511879403572014 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1'] 106451 18848 SVVDGTPLV True PC9_epitope_Rep3 885.48074786573 885.4801949679301 77.721 1 -0.05368015420410968 0.017511879403572014 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 87536 8622 QTIKDIASA True PC9_epitope_Rep5 945.5131106231698 945.51200993586 38.107 2 -0.05372687934740341 0.017511879403572014 0.9438714419765777 ['ENSG00000114209|ENST00000392750|PDCD10'] 6024 21272 APLNLGMIAA True PC9_epitope_Rep3 969.5317378927699 969.53064993586 87.117 2 -0.0537377413843701 0.017511879403572014 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 34512 8187 GQDVGRYQV True PC9_epitope_Rep5 1020.49885754136 1020.49827496793 36.431 1 -0.053770018232939996 0.017511879403572014 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4'] 117807 20628 VAMLPGLAL True PC9_epitope_Rep6 883.5201105799099 883.51900993586 92.078 2 -0.053820420497586015 0.017511879403572014 0.9438714419765777 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 37737 12016 HAVGDIPGV True PC9_epitope_Rep1 863.45011644379 863.4495649679301 51.081 1 -0.05387944535793086 0.017511879403572014 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 72305 16308 MSELPEEVLEY True H1975_Epitope_Rep1 1337.6060846014898 1337.6049899358602 68.086 2 -0.053904245801551856 0.017531642977102364 0.9438714419765777 ['ENSG00000037637|ENST00000375592|FBXO42', 'ENST00000478089.1_1_1:16621266-16641853:-|nuORF'] 72327 8505 MTDDKITEV True PC9_epitope_Rep4 1050.49032657326 1050.48922993586 40.191 2 -0.05391131211290928 0.017531642977102364 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67'] 505 18290 AAPGVDLTQLL True H1975_Epitope_Rep2 1096.61282466444 1096.61172993586 75.838 2 -0.0539708247735651 0.017551045485264902 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 34843 8965 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42828993586 39.84 2 -0.053989063491255915 0.017551045485264902 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 103766 16426 SRFPEALRL True PC9_epitope_Rep3 1087.61382772395 1087.6127299358602 68.319 2 -0.05405107709722631 0.017551045485264902 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 6052 15192 APLYQVAAA True PC9_epitope_Rep5 902.4861675993398 902.48506993586 63.443 2 -0.05410050740207319 0.017570445609436436 0.9438714419765777 ['ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 6139 18895 APNPVVFVA True PC9_epitope_Rep4 912.5069030439199 912.5063549679301 80.766 1 -0.054110257391756886 0.017570445609436436 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 2244 11855 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.5118349679301 50.678 1 -0.054117763006189194 0.017570445609436436 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 125617 12808 VMDSKIVQV True PC9_epitope_Rep3 1017.5528672601698 1017.55176993586 54.287 2 -0.054158269144908705 0.01758984335005631 0.9438714419765777 ['ENSG00000114030|ENST00000344337|KPNA1', 'KPNA6|p.A441D|1|0.41|ENSG00000025800|chr1:32169959-32169959|C/A|missense_variant', 'ENSG00000025800|ENST00000373625|KPNA6', 'ENSG00000196911|ENST00000368564|KPNA5'] 43910 10139 ILDQKINEV True PC9_epitope_Rep6 1070.5971746003 1070.5960699358602 49.619 2 -0.05416470646303221 0.01758984335005631 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 85500 19889 QLIKELPEL True PC9_epitope_Rep3 1081.63831113629 1081.63720993586 81.743 2 -0.054205073594659106 0.01758984335005631 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 35356 15255 GTAGLLEQWLK True NCI_RA007_Epitope_Rep3 1214.66592286646 1214.66482993586 67.549 2 -0.05421449336074293 0.017608157081140843 0.9438714419765777 ['HMCES|p.E162Kfs*13|1|0.24|ENSG00000183624|chr3:129298384-129298386|GAG/AA|frameshift_variant', 'ENSG00000183624|ENST00000383463|HMCES'] 37637 5810 HADEHRLKYQC True H1975_Epitope_Rep3 1398.64626713438 1398.6451699358602 27.371 2 -0.054250639545272886 0.017608157081140843 0.9438714419765777 ['ENSG00000198018|ENST00000370489|ENTPD7'] 32941 7394 GIRQMRLFSQ True H1975_Epitope_Rep3 1234.6604606465398 1234.65936993586 33.419 2 -0.05425091328414942 0.017608157081140843 0.9438714419765777 ['nc|ENSG00000091542|Q6P6C2-3|ALKBH5', 'ENSG00000091542|ENST00000399138|ALKBH5', 'nc|ENSG00000091542|Q6P6C2-1|ALKBH5'] 105149 4348 STLTYRMTK True NCI_RA007_Epitope_Rep3 1099.5695799534699 1099.56848993586 23.854 2 -0.05426449013622976 0.017608157081140843 0.9438714419765777 ['ENST00000446662.5_1_16:22466144-22470768:+|nuORF', 'ENST00000522841.6_1_16:21490806-21495758:-|nuORF'] 99605 13768 SLFNTGFLK True NCI_RA007_Epitope_Rep5 1025.5545815123298 1025.5534899358602 59.633 2 -0.054299124694306394 0.017608157081140843 0.9438714419765777 ['ENSG00000121486|ENST00000367506|TRMT1L'] 84272 12386 QEYFGSLAA True H1975_Epitope_Rep1 984.4552613938797 984.45416993586 52.676 2 -0.054309586755160774 0.017608157081140843 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 18843 9981 ELEERQNL True H1975_Epitope_Rep3 1029.5090878718897 1029.50798993586 43.428 2 -0.05433061344444196 0.017626466313181977 0.9438714419765777 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'nc|ENSG00000176208|Q96QE3-2|ATAD5'] 116898 14671 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47054993586 61.254 2 -0.05434026398892746 0.017626466313181977 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 75291 12096 NPSSVIHVV True PC9_epitope_Rep5 950.51853035678 950.51742993586 51.522 2 -0.05435510202305294 0.017626466313181977 0.9438714419765777 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP'] 117805 21793 VAMLPGLAL True PC9_epitope_Rep4 883.5201105799099 883.51900993586 92.021 2 -0.05437316419819313 0.017626466313181977 0.9438714419765777 ['ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 84151 7959 QERFTQDTQP True H1975_Epitope_Rep2 1248.5734790335998 1248.57184490379 35.562 3 -0.054376775592260465 0.017626466313181977 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 45962 15381 ISSQDGPLSV True PC9_epitope_Rep4 1001.5029398622898 1001.50184993586 67.095 2 -0.054387130648085355 0.017626466313181977 0.9438714419765777 ['ENSG00000105928|ENST00000645220|GSDME', 'nc|ENSG00000105928|O60443-3|GSDME', 'ENST00000469133.1_1_7:24747667-24749942:-|nuORF'] 136667 15239 YIDSDCIGNPD True H1975_Epitope_Rep2 1210.48121844154 1210.48012993586 63.775 2 -0.05442777624066117 0.01766379433857994 0.9438714419765777 ['CCDC91-PDZRN4|1|fusion', 'ENST00000548316.1_1_12:41903559-41967689:+|nuORF', 'nc|ENSG00000165966|Q6ZMN7-4|PDZRN4', 'nc|ENSG00000165966|Q6ZMN7-2|PDZRN4', 'PDZRN4|p.D1005Tfs*4|1|0.32|ENSG00000165966|chr12:41573791-41573791|G/-|frameshift_variant', 'ENSG00000165966|ENST00000402685|PDZRN4'] 23979 17635 EYPDRIMNTF True PC9_epitope_Rep4 1284.5808729131597 1284.5797699358602 75.856 2 -0.054441926071606084 0.01766379433857994 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3'] 45079 8023 IQRQETISL True NCI_RA007_Epitope_Rep5 1086.6033226099 1086.6022299358601 37.551 2 -0.05449303566900532 0.01766379433857994 0.9438714419765777 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1', 'MX1|p.V216L|1|0.36|ENSG00000157601|chr21:41440941-41440941|G/T|missense_variant'] 5385 19842 ALVESLITV True PC9_epitope_Rep6 943.55899818643 943.55790993586 88.983 2 -0.05449695191815023 0.01766379433857994 0.9438714419765777 ['ENSG00000196233|ENST00000421806|LCOR'] 6463 9138 APTAEGLAA True PC9_epitope_Rep2 799.4075829254699 799.40703496793 40.491 1 -0.05457629552692336 0.01766379433857994 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 107713 16218 TALLKIEGV True PC9_epitope_Rep4 942.57498260374 942.57388993586 70.325 2 -0.05457696375617799 0.01766379433857994 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 43795 6820 IKFYRMRHHYK True H1975_Epitope_Rep1 1577.84015634401 1577.83852490379 31.275 3 -0.05458417420653631 0.01766379433857994 0.9438714419765777 ['ENSG00000134758|ENST00000261593|RNF138'] 66728 6988 LSTQIAHLA True H1975_Epitope_Rep2 952.5341804209198 952.53308993586 31.802 2 -0.05460479579071367 0.01766379433857994 0.9438714419765777 ['ENSG00000167094|ENST00000373289|TTC16', 'ENST00000488285.1_1_9:130486913-130493681:+|nuORF', 'ENST00000489226.5_1_9:130485405-130489873:+|nuORF'] 86036 15465 QPLGTLPQA True PC9_epitope_Rep3 923.5076313199098 923.50652993586 64.638 2 -0.05460529005687261 0.01766379433857994 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 118855 3906 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 20.144 2 -0.05463928023554967 0.01766379433857994 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 47500 20253 IYLDLPQNF True PC9_epitope_Rep6 1121.57571087973 1121.57460993586 90.587 2 -0.05465140183041708 0.017683900282451186 0.9438714419765777 ['ENSG00000013561|ENST00000394520|RNF14', 'ENST00000502341.5_1_5:141348723-141357950:+|nuORF'] 1200 8824 AEDEAAALP True H1975_Epitope_Rep2 885.4079768482899 885.40686993586 38.908 2 -0.05466276075618711 0.01770364306180925 0.9438714419765777 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 96026 9910 SEALPSDIA True H1975_Epitope_Rep2 901.43927697657 901.43816993586 43.107 2 -0.05474465091613824 0.01770364306180925 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 106125 5285 SVNRPALR True H1975_Epitope_Rep3 911.5300980999899 911.52900993586 25.412 2 -0.05480370064603508 0.017722658808120496 0.9438714419765777 ['nc|ENSG00000099834|Q9HBB8-2|CDHR5', 'nc|ENSG00000099834|Q9HBB8-4|CDHR5', 'ENSG00000099834|ENST00000397542|CDHR5', 'CDHR5|p.A757Qfs*12|1|0.24|ENSG00000099834|chr11:617603-617603|G/-|frameshift_variant'] 37852 4950 HDPSAVAV True PC9_epitope_Rep4 794.3922672145001 794.39116993586 25.644 2 -0.054811230216364366 0.017722658808120496 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 37577 18857 GYSEHFVEF True PC9_epitope_Rep3 1113.47672511445 1113.47562993586 77.758 2 -0.05482857715980275 0.017722658808120496 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000559606.1_1_14:24704927-24706289:+|nuORF', 'ENST00000559287.5_1_14:24702733-24706289:+|nuORF', 'nc|ENSG00000100938|Q9P2T1-3|GMPR2', 'ENSG00000100938|ENST00000399440|GMPR2', 'nc|ENSG00000100938|Q9P2T1-2|GMPR2', 'ENSG00000137198|ENST00000259727|GMPR'] 101952 8541 SPLSTPTSA True PC9_epitope_Rep4 859.42871229287 859.42760993586 40.332 2 -0.05483800237672164 0.017722658808120496 0.9438714419765777 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'ENSG00000167775|ENST00000301458|CD320', 'nc|ENSG00000167775|Q9NPF0-2|CD320'] 76276 10720 NSDPGLAVGY True H1975_Epitope_Rep2 991.46107505031 991.45996993586 46.261 2 -0.054855218326613 0.01773804165473219 0.9438714419765777 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 107942 15075 TAYDNFVEL True NCI_RA007_Epitope_Rep3 1070.49204082542 1070.49094993586 66.781 2 -0.05486387190807866 0.01773804165473219 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 120430 19390 VFTNSSWLW True NCI_RA007_Epitope_Rep5 1138.54474510462 1138.54364993586 81.469 2 -0.054869262637354144 0.01773804165473219 0.9438714419765777 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 84854 7856 QHQETINTL True PC9_epitope_Rep1 1082.5356369729 1082.53452993586 35.045 2 -0.054883277740435284 0.01773804165473219 0.9438714419765777 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 127665 13017 VRESQLLL True PC9_epitope_Rep6 956.5654805492 956.56438993586 61.65 2 -0.054891241491892756 0.01773804165473219 0.9438714419765777 ['nc|ENSG00000100890|O15091-2|PRORP', 'ENSG00000100890|ENST00000534898|PRORP', 'nc|ENSG00000100890|O15091-4|PRORP', 'nc|ENSG00000100890|O15091-3|PRORP'] 128965 23230 VSVQLLLV True PC9_epitope_Rep1 869.5586042636099 869.55750993586 94.153 2 -0.0549277518749264 0.01773804165473219 0.9438714419765777 ['ENSG00000183303|ENST00000329434|OR5P2'] 96812 13826 SESDYIVMP True H1975_Epitope_Rep3 1039.4532127885498 1039.45210993586 58.487 2 -0.05497540601893746 0.01773804165473219 0.9438714419765777 ['nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'SCARB1|p.G128S|1|0.24|ENSG00000073060|chr12:124815017-124815017|C/T|missense_variant', 'nc|ENSG00000073060|Q8WTV0-4|SCARB1', 'ENST00000535005.5_1_12:125267231-125351555:-|nuORF', 'ENSG00000073060|ENST00000261693|SCARB1', 'nc|ENSG00000073060|Q8WTV0|SCARB1'] 39364 8246 HLVDEPQNLIK True NCI_RA007_Epitope_Rep5 1304.7088503076 1304.7077499358602 38.397 2 -0.055001090730745036 0.01773804165473219 0.9438714419765777 ['CON__P02769'] 34894 7853 GQVPPGESV True PC9_epitope_Rep5 868.42904664604 868.4279499358599 35.149 2 -0.05501648939245215 0.01773804165473219 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 9483 19414 AVYGPELYAA True PC9_epitope_Rep1 1052.51786165044 1052.51676993586 79.486 2 -0.0550454500144163 0.01773804165473219 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000100320|O43251-4|RBFOX2', 'nc|ENSG00000100320|O43251-9|RBFOX2'] 55721 7696 LDDLVSTGK True PC9_epitope_Rep4 946.49712620586 946.49602993586 36.987 2 -0.055076225482913244 0.01773804165473219 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 47061 18589 IVTNFLAGFEA True H1975_Epitope_Rep1 1180.61282466444 1180.61172993586 77.516 2 -0.05511731659408116 0.01773804165473219 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43664250-43664349:-|nuORF'] 139527 19277 YTLDGGDIINA True PC9_epitope_Rep4 1150.5506183307 1150.5495299358602 82.254 2 -0.055135170149638785 0.01773804165473219 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 88071 16544 QVVGGIYGV True PC9_epitope_Rep6 890.4861675993399 890.48506993586 76.076 2 -0.05514450544772748 0.01773804165473219 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 26103 12657 FHESGFTTV True PC9_epitope_Rep5 1023.4661604307499 1023.46506993586 53.689 2 -0.05516302249712209 0.017757774140752865 0.9438714419765777 ['ARAP2-PDS5A|1|fusion', 'ENSG00000047365|ENST00000303965|ARAP2', 'ARAP2|p.G359Efs*29|2|0.27|ENSG00000047365|chr4:36212453-36212453|C/-|frameshift_variant', 'ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 131984 18093 VYGHQFMNL True PC9_epitope_Rep3 1107.51715045779 1107.51604993586 74.791 2 -0.05518191240411091 0.017757774140752865 0.9438714419765777 ['ENSG00000146263|ENST00000683635|MMS22L', 'ENST00000506256.5_1_6:97707503-97720651:-|nuORF', 'ENST00000511335.5_1_6:97715738-97720957:-|nuORF', 'ENST00000509383.5_1_6:97679279-97717985:-|nuORF', 'ENST00000508976.5_1_6:97702357-97730353:-|nuORF'] 136400 7979 YHEHQANLL True PC9_epitope_Rep1 1123.5410567065098 1123.53940490379 35.514 3 -0.055251666945987925 0.01779505011249744 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 85138 8273 QITQINHGL True PC9_epitope_Rep6 1022.5508931142199 1022.5497899358601 41.429 2 -0.05525460325833776 0.01779505011249744 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 21006 2690 ERAPPQTHL True PC9_epitope_Rep1 1047.5461420869499 1047.54504993586 14.777 2 -0.05525779410378741 0.01779505011249744 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 9868 14922 AYMPHTFFI True NCI_RA007_Epitope_Rep5 1125.53173789277 1125.53064993586 64.064 2 -0.055261367542937305 0.01779505011249744 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 5221 5506 ALQASALK True PC9_epitope_Rep3 800.47560291564 800.4745099358599 26.254 2 -0.05526337461061064 0.01779505011249744 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 102964 7680 SQIQEFKEA True PC9_epitope_Rep2 1078.5294889632999 1078.52838993586 34.91 2 -0.05526409430512859 0.01779505011249744 0.9438714419765777 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'ENST00000577510.5_1_18:3252320-3253446:+|nuORF', 'ENST00000580353.1_1_18:3247898-3253446:+|nuORF', 'ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 107668 19089 TAISLFYEL True NCI_RA007_Epitope_Rep3 1055.5539128059902 1055.55280993586 83.38 2 -0.055272137620699824 0.01779505011249744 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 113014 15586 TPTPVPVV True PC9_epitope_Rep1 808.4694549060399 808.46834993586 64.773 2 -0.05527651359576786 0.01779505011249744 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 26127 8992 FHGPGEAL True PC9_epitope_Rep2 826.3973525949399 826.3962499358599 39.94 2 -0.05530197567817718 0.01779505011249744 0.9438714419765777 ['ENSG00000277150|ENST00000622749|F8A3'] 34887 8277 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 36.812 2 -0.05530398693866691 0.01779505011249744 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 89323 8151 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64349490379 39.175 3 -0.05537411786668117 0.017810768255526247 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 132876 12763 VYTSGVYHI True PC9_epitope_Rep2 1037.51819600361 1037.5170899358602 54.399 2 -0.05539485616691832 0.017810768255526247 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 101368 21064 SMPDFDLHL True PC9_epitope_Rep1 1073.48518162317 1073.48408993586 85.854 2 -0.05539706144547955 0.017810768255526247 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 64265 14654 LQLERISV True PC9_epitope_Rep5 956.5654805492 956.56438993586 61.369 2 -0.05542648404622697 0.017810768255526247 0.9438714419765777 ['ENSG00000258947|ENST00000315491|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000554927.1_1_16:89989809-89999206:+|nuORF'] 87526 11365 QTHSVFVNV True PC9_epitope_Rep4 1029.5243440132099 1029.5232499358601 51.489 2 -0.0554601738074547 0.017810768255526247 0.9438714419765777 ['ENSG00000126524|ENST00000246868|SBDS', 'ENST00000437201.5_1_7:72300234-72301326:+|nuORF'] 47533 20255 IYLPYLQNW True NCI_RA007_Epitope_Rep5 1208.6229954253201 1208.62188993586 84.851 2 -0.05547580865140689 0.017810768255526247 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 101348 16470 SMAPGLTSV True PC9_epitope_Rep3 861.4266041178901 861.42550993586 68.49 2 -0.05548200943288515 0.017810768255526247 0.9438714419765777 ['nc|ENSG00000198682|O95340|PAPSS2', 'ENSG00000198682|ENST00000456849|PAPSS2'] 124533 14618 VLGAFSDG True PC9_epitope_Rep5 764.37046914076 764.36992496793 61.229 1 -0.05548224835260919 0.017810768255526247 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66N|1|0.32|ENSG00000223609|chr11:5234108-5234108|C/A|missense_variant'] 74001 6893 NHQGTYVL True PC9_epitope_Rep6 930.4559301002199 930.45482993586 35.425 2 -0.055508975175250004 0.017810768255526247 0.9438714419765777 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A'] 72024 13854 MQLPTRQEI True PC9_epitope_Rep5 1114.58047899034 1114.57938993586 58.311 2 -0.05555151753714284 0.017810768255526247 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B', 'ENST00000466199.1_1_7:2406190-2411546:+|nuORF'] 75559 19849 NQMDGFDTL True PC9_epitope_Rep2 1039.4280606698699 1039.4269699358601 81.741 2 -0.055595657660197556 0.017810768255526247 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 126968 8323 VPVSLKEA True PC9_epitope_Rep1 841.49091862661 841.48982993586 36.848 2 -0.05561524049734858 0.017810768255526247 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 45422 4595 ISDSEGFK True PC9_epitope_Rep4 881.4130622287299 881.41196993586 24.176 2 -0.0556265250061753 0.017810768255526247 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 87570 5231 QTMSDTTFK True NCI_RA007_Epitope_Rep5 1057.47501086229 1057.47390993586 26.818 2 -0.055648136308321765 0.01783085228202192 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF', 'CTTNBP2NL-CAPZA1|1|fusion'] 39607 11351 HPLLGVSA True PC9_epitope_Rep3 792.4493881678001 792.44828993586 48.665 2 -0.05567734002374588 0.017849475556646018 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 30092 23751 FYPAIADLF True PC9_epitope_Rep3 1055.5327834385898 1055.5316899358602 96.643 2 -0.05572559756029394 0.017849475556646018 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 131018 16820 VVLGIRPIRL True PC9_epitope_Rep4 1134.76009803482 1134.7584449037902 72.67 3 -0.05574881769563197 0.017849475556646018 0.9438714419765777 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 52528 4387 KPPPPPPPP True PC9_epitope_Rep4 922.5276384884999 922.52654993586 23.317 2 -0.05577077608499579 0.017849475556646018 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 84625 7310 QHDPSSNNAML True PC9_epitope_Rep5 1212.51933528576 1212.51822993586 33.08 2 -0.0558170078910401 0.017849475556646018 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 94573 5435 RYIRDAHTF True NCI_RA007_Epitope_Rep2 1177.59924028897 1177.5976049037902 25.76 3 -0.05584288780323851 0.017869556327949294 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 69177 10314 LVLVNHKSGG True PC9_epitope_Rep5 1022.5872786229401 1022.58618993586 44.658 2 -0.05588792834449939 0.017885613834266793 0.9438714419765777 ['DGKG|p.P441H|1|0.45|ENSG00000058866|chr3:186261726-186261726|G/T|missense_variant'] 76181 16154 NRSRIQVWL True PC9_epitope_Rep1 1170.6621748986997 1170.66052490379 66.951 3 -0.055910156396458674 0.017885613834266793 0.9438714419765777 ['ENSG00000182004|ENST00000414487|SNRPE'] 41512 17422 IDALSCLYV True H1975_Epitope_Rep3 995.49976905815 995.4992249679301 72.694 1 -0.05597114545527938 0.017885613834266793 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'CAND1|p.L505Qfs*32|1|0.65|ENSG00000111530|chr12:67305182-67305186|TCTGT/-|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-3|CAND1'] 24381 13579 FAENNFTEL True NCI_RA007_Epitope_Rep4 1083.48728979815 1083.48618993586 59.439 2 -0.05597422002768517 0.017885613834266793 0.9438714419765777 ['ENSG00000066336|ENST00000378538|SPI1', 'nc|ENSG00000066336|P17947-2|SPI1'] 54491 15709 LAAATATFAAA True PC9_epitope_Rep1 977.5181960036099 977.51708993586 65.248 2 -0.0560236772066156 0.017885613834266793 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 136766 19936 YIPTELDQV True PC9_epitope_Rep5 1076.53899101784 1076.53847496793 81.738 1 -0.056041574473393134 0.017885613834266793 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 46902 16319 IVIRGLNTI True PC9_epitope_Rep4 997.62841515893 997.62730993586 70.733 2 -0.056055813592357104 0.017885613834266793 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 112957 22763 TPSDIFMVM True PC9_epitope_Rep1 1039.4718400581498 1039.47074993586 92.367 2 -0.056055884699745324 0.017885613834266793 0.9438714419765777 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1'] 64021 10675 LQDAGLLAD True H1975_Epitope_Rep2 914.4709114580199 914.46980993586 46.085 2 -0.05611223513664604 0.017885613834266793 0.9438714419765777 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF', 'ENST00000320442.8_1_12:58014065-58016599:+|nuORF'] 115478 12977 TVFTHLSSL True PC9_epitope_Rep1 1003.5338460677499 1003.53274993586 54.788 2 -0.0561147211845918 0.017885613834266793 0.9438714419765777 ['ENSG00000171970|ENST00000306908|ZNF57'] 126 19803 AAAWPLLL True H1975_Epitope_Rep3 853.5061747679299 853.50506993586 82.914 2 -0.05611564545658352 0.017885613834266793 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 48777 8370 KEQLPPLAAA True H1975_Epitope_Rep2 1036.5916952970397 1036.5905899358602 37.148 2 -0.056149091610590444 0.017885613834266793 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 83296 15919 QAIEKLEEI True PC9_epitope_Rep1 1071.58119018299 1071.58008993586 66.043 2 -0.05624774168245545 0.017904224661229994 0.9438714419765777 ['ENSG00000230453|ENST00000684830|ANKRD18B', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENST00000354752.5_1_9:99922575-99942308:-|nuORF'] 62897 23240 LMSLIINTF True PC9_epitope_Rep5 1050.57835373202 1050.57777496793 94.376 1 -0.05630977138330552 0.017904224661229994 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 28045 18019 FRDAFTQEL True PC9_epitope_Rep3 1125.54547338061 1125.54436993586 74.512 2 -0.05632616969740994 0.017904224661229994 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 61691 16900 LLIDDKGTIKL True PC9_epitope_Rep4 1227.74383883399 1227.74218490379 72.99 3 -0.05639224173728873 0.017904224661229994 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 29372 23615 FVEPFVILL True PC9_epitope_Rep4 1075.63176920387 1075.6306699358602 99.155 2 -0.05640335270140602 0.017904224661229994 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2', 'nc|ENSG00000196296|O14983|ATP2A1', 'ENSG00000196296|ENST00000395503|ATP2A1'] 72682 24599 MYIIPVVLF True PC9_epitope_Rep5 1093.6245756484498 1093.6234699358602 99.738 2 -0.05641921957568667 0.01792393059330867 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10'] 24693 19490 FAVALPQLL True H1975_Epitope_Rep3 970.5851533646198 970.5846049679301 81.684 1 -0.05642533852563563 0.01792393059330867 0.9438714419765777 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant'] 24537 19445 FALASHLIEA True PC9_epitope_Rep5 1070.5760452329 1070.57494993586 79.846 2 -0.05644360493538242 0.017940335104209237 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 15335 9735 EALATLPSSP True H1975_Epitope_Rep1 984.51277627 984.51222496793 42.374 1 -0.05647510487864305 0.017940335104209237 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF'] 101598 9116 SPFAEGTSA True PC9_epitope_Rep2 865.38176210045 865.3806699358599 40.405 2 -0.05648278530810498 0.017940335104209237 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-2|CIT'] 28050 15171 FRDAFTQEL True PC9_epitope_Rep6 1125.54547338061 1125.54436993586 70.432 2 -0.05650751034055343 0.017940335104209237 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 118655 10144 VEAPTTLPP True H1975_Epitope_Rep2 923.4963979298699 923.49530993586 44.018 2 -0.05652658715663545 0.017940335104209237 0.9438714419765777 ['ENSG00000162231|ENST00000294172|NXF1'] 2596 8970 AESKQYFEQY True H1975_Epitope_Rep2 1291.57208205127 1291.57098993586 39.457 2 -0.056569163312591604 0.017940335104209237 0.9438714419765777 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant'] 25264 8523 FEDGQKIVV True H1975_Epitope_Rep3 1033.5444107514497 1033.5433099358602 37.769 2 -0.05660001133153804 0.017940335104209237 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A', 'ENST00000586541.5_2_17:66524793-66526587:+|nuORF'] 44449 12368 INLHSQDLL True PC9_epitope_Rep4 1051.56620882519 1051.5651099358602 55.38 2 -0.05661182042129435 0.017940335104209237 0.9438714419765777 ['ENSG00000165495|ENST00000298282|PKNOX2', 'nc|ENSG00000165495|Q96KN3-2|PKNOX2'] 84328 12642 QFPGNSVAP True PC9_epitope_Rep3 915.4450310633499 915.44392993586 53.649 2 -0.056650469810263115 0.017940335104209237 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 32719 9558 GHSTAVVSL True PC9_epitope_Rep1 869.46068112749 869.45958993586 41.623 2 -0.056661738522978976 0.017940335104209237 0.9438714419765777 ['ENSG00000156463|ENST00000359120|SH3RF2', 'SH3RF2|p.S564Qfs*64|1|0.55|ENSG00000156463|chr5:146059995-146059995|C/-|frameshift_variant', 'SH3RF2|p.A673Rfs*13|1|0.23|ENSG00000156463|chr5:146062527-146062527|G/-|frameshift_variant'] 5769 14573 APELLFFAK True H1975_Epitope_Rep3 1034.5800679841798 1034.5789699358602 61.422 2 -0.056667059179993734 0.017940335104209237 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1'] 41370 5802 IAPALVSK True NCI_RA007_Epitope_Rep1 797.5010893874901 797.49998993586 26.621 2 -0.0567019766453909 0.017957099080694587 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 61322 7583 LLEDKHFQSY True H1975_Epitope_Rep3 1278.6244519773 1278.62334993586 34.149 2 -0.05670973928749883 0.017957099080694587 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6', 'ENST00000489684.2_1_3:49044864-49050780:+|nuORF'] 97845 11574 SHIGDAVVI True PC9_epitope_Rep6 909.49198125577 909.4914349679301 55.628 1 -0.056734605270495383 0.017957099080694587 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 17217 14607 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 64.115 2 -0.05683264194182324 0.017957099080694587 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 2780 7272 AEVDAAMAA True NCI_RA007_Epitope_Rep3 847.3745685450299 847.3740149679301 35.714 1 -0.05684688779855676 0.017957099080694587 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 16299 9507 EEIQGLTTA True NCI_RA007_Epitope_Rep5 960.47639076128 960.47528993586 43.202 2 -0.05685023786248491 0.017957099080694587 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 8826 20720 AVFPSIVG True PC9_epitope_Rep1 788.4432401582 788.44269496793 84.524 1 -0.05690273619632058 0.017957099080694587 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 42318 16911 IEKTMSEMVT True PC9_epitope_Rep2 1167.55154693083 1167.5504499358601 70.291 2 -0.056922739228743746 0.017957099080694587 0.9438714419765777 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 114194 10733 TRTVTTLAV True PC9_epitope_Rep5 960.5603951687599 960.55928993586 46.277 2 -0.056925194050958895 0.017957099080694587 0.9438714419765777 ['ENSG00000165572|ENST00000379485|KBTBD6'] 109831 15666 THLGPLASL True PC9_epitope_Rep4 907.51271670035 907.51160993586 68.187 2 -0.05693756476496403 0.017957099080694587 0.9438714419765777 ['ENSG00000127399|ENST00000359623|LRRC61'] 44219 17812 ILSKDGVLYV True PC9_epitope_Rep3 1105.63831113629 1105.63720993586 73.711 2 -0.05698658480982481 0.017970552798709388 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000454465.1_1_2:87398353-87423749:+|nuORF'] 84724 12601 QHFPEQMKL True PC9_epitope_Rep3 1156.5699143066397 1156.56826490379 53.493 3 -0.057008137896271356 0.017970552798709388 0.9438714419765777 ['nc|ENSG00000115750|Q53T94-2|TAF1B', 'ENSG00000115750|ENST00000263663|TAF1B'] 41910 13013 IEAELEKVA True PC9_epitope_Rep1 1000.5440763982799 1000.54296993586 54.926 2 -0.057029272425593434 0.017970552798709388 0.9438714419765777 ['ENSG00000100604|ENST00000216492|CHGA'] 29350 17996 FVEEEEHFL True PC9_epitope_Rep3 1177.52915461013 1177.52804993586 74.425 2 -0.05703789256028974 0.017970552798709388 0.9438714419765777 ['ENSG00000168159|ENST00000305943|RNF187'] 101022 21029 SLTGVPILVV True PC9_epitope_Rep2 996.6219327961599 996.62082993586 86.341 2 -0.057040171745077146 0.017970552798709388 0.9438714419765777 ['ENSG00000250510|ENST00000311268|GPR162'] 135173 6500 YASSANLHLPK True NCI_RA007_Epitope_Rep5 1199.62987171091 1199.62822490379 31.668 3 -0.057066764348363455 0.017970552798709388 0.9438714419765777 ['CON__P34955'] 106824 19728 SYIALPLTL True NCI_RA007_Epitope_Rep1 989.57973363101 989.57862993586 80.924 2 -0.057077461965558414 0.017970552798709388 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 119480 13262 VEQESLLTAFR True NCI_RA007_Epitope_Rep2 1291.67721582615 1291.67610993586 56.222 2 -0.05711339153060063 0.017970552798709388 0.9438714419765777 ['ENSG00000130638|ENST00000252934|ATXN10', 'nc|ENSG00000130638|Q9UBB4-2|ATXN10'] 106490 9497 SVVKNTISL True NCI_RA007_Epitope_Rep4 959.56514619603 959.56404993586 43.381 2 -0.05716889910341069 0.017970552798709388 0.9438714419765777 ['ENST00000601004.1_1_19:23567552-23568092:+|nuORF'] 38463 7880 HGVSLGSSL True NCI_RA007_Epitope_Rep4 855.4450310633501 855.44392993586 37.034 2 -0.05717322294948211 0.017970552798709388 0.9438714419765777 ['ENSG00000140396|ENST00000452400|NCOA2'] 117392 11547 VADAVTYQL True NCI_RA007_Epitope_Rep3 978.5022115863001 978.50110993586 52.551 2 -0.05717842109549173 0.017970552798709388 0.9438714419765777 ['ENSG00000142507|ENST00000270586|PSMB6'] 126537 17876 VPPAVTGITFL True H1975_Epitope_Rep1 1113.64339651673 1113.6422899358602 74.45 2 -0.05719183421953507 0.017970552798709388 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 38111 9005 HEPEPHIL True PC9_epitope_Rep3 970.4872302285 970.48612993586 39.582 2 -0.05720532289043548 0.017970552798709388 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 36822 19465 GVPQALFGV True PC9_epitope_Rep6 886.4912529797799 886.49014993586 87.536 2 -0.05721373034989197 0.017970552798709388 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 26280 18476 FIDDANYSV True PC9_epitope_Rep3 1042.4607406971402 1042.46017496793 76.276 1 -0.057223863592148934 0.017970552798709388 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 77508 15309 NYQGHFHLF True PC9_epitope_Rep2 1161.5355774032498 1161.53392490379 64.168 3 -0.057270708804922354 0.017970552798709388 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 32853 23738 GIIDDLVVL True PC9_epitope_Rep5 955.5589981864299 955.55790993586 96.289 2 -0.057283365504844315 0.017970552798709388 0.9438714419765777 ['ENSG00000132613|ENST00000338779|MTSS2', 'nc|ENSG00000132613|Q765P7-2|MTSS2'] 86068 15212 QPMAVVQSV True PC9_epitope_Rep3 957.4953523840499 957.49424993586 63.658 2 -0.0572855924336033 0.017970552798709388 0.9438714419765777 ['nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'ENSG00000140464|ENST00000268058|PML'] 77246 15294 NYIMKIHNF True PC9_epitope_Rep3 1178.5906497512199 1178.58901490379 63.981 3 -0.057310076685797864 0.017970552798709388 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 83291 5929 QAIADEQKK True NCI_RA007_Epitope_Rep3 1029.54547338061 1029.54436993586 30.301 2 -0.05737269517925811 0.017989137093151468 0.9438714419765777 ['ENST00000575500.5_2_17:78178032-78182141:+|nuORF', 'ENSG00000141527|ENST00000648509|CARD14'] 38512 4008 HHDDPEVL True PC9_epitope_Rep6 960.4301092752 960.42900993586 22.207 2 -0.05739652873290476 0.017989137093151468 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 44508 16556 IPAALPTQ True PC9_epitope_Rep5 809.46470387877 809.4641549679301 68.687 1 -0.05740512784967443 0.017989137093151468 0.9438714419765777 ['nc|ENSG00000108509|O94983-6|CAMTA2'] 117112 13935 TYSHGNYLF True PC9_epitope_Rep4 1100.49270953176 1100.4916099358602 61.504 2 -0.05744904342348954 0.017989137093151468 0.9438714419765777 ['nc|ENSG00000292366|P51809-2|VAMP7', 'ENSG00000124333|ENST00000286448|VAMP7'] 140104 22296 YVPPELITL True PC9_epitope_Rep1 1043.59029831471 1043.58920993586 90.573 2 -0.05745801417207171 0.017989137093151468 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 137005 5454 YKKRLSVEL True NCI_RA007_Epitope_Rep1 1134.67609362734 1134.6744449037901 25.288 3 -0.05748721914726878 0.01800918836140888 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 70370 17915 LYQDGVFKF True PC9_epitope_Rep6 1115.56514619603 1115.56404993586 81.535 2 -0.05749914037154751 0.01802850259300094 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24170479-24171004:+|nuORF', 'ENST00000563108.5_1_16:53528870-53534189:-|nuORF'] 109050 21494 TFAELSLGL True PC9_epitope_Rep4 949.5120479940099 949.51094993586 90.863 2 -0.05749979899726241 0.01802850259300094 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 4301 16742 AILANKNASL True PC9_epitope_Rep5 1013.58694426977 1013.58584993586 69.405 2 -0.057500985353184104 0.01802850259300094 0.9438714419765777 ['PRRX1|p.M156I|1|0.35|ENSG00000116132|chr1:170726270-170726270|G/T|missense_variant'] 61129 9211 LLDEDNNIK True PC9_epitope_Rep3 1072.540053647 1072.53894993586 40.365 2 -0.057568845941683024 0.018047446000571638 0.9438714419765777 ['ENSG00000142149|ENST00000270112|HUNK'] 132231 16521 VYKPVSIYL True PC9_epitope_Rep6 1080.6219327961599 1080.62082993586 75.985 2 -0.057579388986312555 0.018047446000571638 0.9438714419765777 ['ENST00000367210.2_2_1:203771435-203771690:+|nuORF'] 134416 15357 WTDLALQY True H1975_Epitope_Rep2 1008.4916469026 1008.4910749679301 64.23 1 -0.05758223671068513 0.018047446000571638 0.9438714419765777 ['ANAPC13|p.M55I|1|0.22|ENSG00000129055|chr3:134478650-134478650|C/T|missense_variant', 'ENSG00000129055|ENST00000354910|ANAPC13'] 101947 16444 SPLSSPLAQA True PC9_epitope_Rep1 969.5131106231698 969.51200993586 68.076 2 -0.05758641714002984 0.018047446000571638 0.9438714419765777 ['ENST00000394540.3_1_11:64010007-64010954:+|nuORF', 'ENST00000541388.1_1_11:64010007-64011498:+|nuORF'] 68991 17546 LVGPVLGAA True PC9_epitope_Rep5 795.4854393233499 795.48489496793 72.498 1 -0.05759759159301968 0.018064542466983732 0.9438714419765777 ['ADAM9-RNF170|1|fusion', 'ADAM9-HTRA4|1|fusion', 'nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 107099 14897 SYMGHFDLL True NCI_RA007_Epitope_Rep2 1081.49026700361 1081.4891699358602 62.621 2 -0.05763916739226568 0.018064542466983732 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 47320 20651 IYGLLKNPF True PC9_epitope_Rep3 1063.60661708519 1063.6055299358602 84.705 2 -0.0576507465655357 0.018064542466983732 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1', 'ENST00000463270.1_1_10:27418274-27425210:-|nuORF'] 31333 11444 GEAIPALAA True H1975_Epitope_Rep2 811.44396843419 811.44286993586 49.072 2 -0.05766915766498125 0.018064542466983732 0.9438714419765777 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000558780.5_2_14:24649650-24651621:-|nuORF'] 90929 10314 RLERGEYVL True PC9_epitope_Rep4 1133.61930702721 1133.61766490379 47.36 3 -0.057682899681099305 0.018064542466983732 0.9438714419765777 ['ENST00000400596.2_1_13:20134155-20134623:-|nuORF'] 14278 2553 DSYVGDEAQSK True PC9_epitope_Rep6 1197.51496109797 1197.5138699358602 14.749 2 -0.05769069830023944 0.018064542466983732 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 71918 7419 MPRQLSAAAA True PC9_epitope_Rep2 1014.5280494946599 1014.52694993586 33.913 2 -0.0577216975946161 0.018064542466983732 0.9438714419765777 ['ENSG00000078081|ENST00000265598|LAMP3'] 75436 6674 NQGIKVAAI True NCI_RA007_Epitope_Rep3 912.5392658013599 912.53816993586 33.332 2 -0.05775195587130179 0.018064542466983732 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 138347 6917 YRASGEQL True PC9_epitope_Rep5 922.45084471978 922.44974993586 31.576 2 -0.05776432071281243 0.018064542466983732 0.9438714419765777 ['nc|ENSG00000106328|Q9NQT6-2|FSCN3'] 54983 18839 LAIGASFTV True PC9_epitope_Rep6 877.49091862661 877.49037496793 85.108 1 -0.057790262088872835 0.018080894657360923 0.9438714419765777 ['nc|ENSG00000104635|Q15043-2|SLC39A14', 'nc|ENSG00000104635|Q15043-3|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 21520 9645 ERRLSELAL True PC9_epitope_Rep2 1085.61930702721 1085.61820993586 42.44 2 -0.057805211136425706 0.018080894657360923 0.9438714419765777 ['MICAL1|p.G1062R|1|0.28|ENSG00000135596|chr6:109444211-109444211|C/T|missense_variant', 'nc|ENSG00000135596|Q8TDZ2-3|MICAL1', 'nc|ENSG00000135596|Q8TDZ2-2|MICAL1', 'ENSG00000135596|ENST00000358807|MICAL1', 'nc|ENSG00000135596|Q8TDZ2-4|MICAL1'] 42589 7725 IESRTLAIA True NCI_RA007_Epitope_Rep4 972.5603951687599 972.5598449679301 36.386 1 -0.05785910684888633 0.018080894657360923 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 38040 5844 HEKQVYDIAA True H1975_Epitope_Rep3 1172.5825871653199 1172.58094490379 27.493 3 -0.05789780041559096 0.018080894657360923 0.9438714419765777 ['ENSG00000018510|ENST00000264167|AGPS'] 61833 20063 LLLAQLSDA True PC9_epitope_Rep4 942.53859709502 942.53750993586 85.309 2 -0.05790895092691064 0.018080894657360923 0.9438714419765777 ['ENSG00000175348|ENST00000534025|TMEM9B'] 623 17623 AASTLVTWL True H1975_Epitope_Rep2 960.52803241132 960.52692993586 73.104 2 -0.05791351199032728 0.018080894657360923 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 71561 18073 MLDQTLLEL True NCI_RA007_Epitope_Rep4 1074.5630975907 1074.56200993586 78.207 2 -0.05792059883758644 0.018080894657360923 0.9438714419765777 ['nc|ENSG00000140416|P09493-3|TPM1', 'nc|ENSG00000140416|P09493-9|TPM1', 'nc|ENSG00000140416|P09493-2|TPM1', 'nc|ENSG00000140416|P09493-8|TPM1', 'nc|ENSG00000140416|P09493-7|TPM1', 'ENST00000558264.5_1_15:63353458-63363368:+|nuORF'] 131760 16055 VYADQPHIF True PC9_epitope_Rep1 1088.52909504048 1088.5279899358602 66.569 2 -0.05792335454451482 0.018080894657360923 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 99923 24173 SLIDQFFGV True PC9_epitope_Rep3 1024.5229470308798 1024.52184993586 98.268 2 -0.057991910493176035 0.018080894657360923 0.9438714419765777 ['nc|ENSG00000101557|P54578-2|USP14', 'nc|ENSG00000101557|P54578-3|USP14', 'ENSG00000101557|ENST00000261601|USP14'] 39088 11275 HLAIKLEQV True PC9_epitope_Rep4 1049.62332977849 1049.62222993586 51.145 2 -0.05799967115947195 0.018080894657360923 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 26129 8553 FHGPGEAL True PC9_epitope_Rep4 826.3973525949399 826.3962499358599 40.378 2 -0.05802842424694403 0.018080894657360923 0.9438714419765777 ['ENSG00000277150|ENST00000622749|F8A3'] 25255 8139 FEDESPPAP True H1975_Epitope_Rep1 987.4185415319898 987.41744993586 36.247 2 -0.05808821595846556 0.01809982451128433 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D'] 104257 16357 SSDSTFLVL True NCI_RA007_Epitope_Rep4 967.4862271689899 967.48512993586 70.918 2 -0.058117771755325065 0.01809982451128433 0.9438714419765777 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF'] 96977 9026 SEVGKLLSA True NCI_RA007_Epitope_Rep4 902.50729696674 902.50618993586 41.55 2 -0.058120250839918265 0.01809982451128433 0.9438714419765777 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF'] 116890 11799 TYPAELNNI True NCI_RA007_Epitope_Rep3 1033.50802524273 1033.5069299358602 53.527 2 -0.05813446448536224 0.01809982451128433 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 76448 18089 NTANSLLSV True PC9_epitope_Rep5 917.48181049489 917.48070993586 74.592 2 -0.05818536300587674 0.01813878517067597 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 130851 6294 VVGDVAYDEAK True H1975_Epitope_Rep3 1164.5662683948397 1164.56516993586 29.215 2 -0.05820089724645186 0.01813878517067597 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 2199 11686 AENNWIEEA True H1975_Epitope_Rep3 1074.4618033263 1074.4607099358602 50.088 2 -0.05821896419585976 0.01813878517067597 0.9438714419765777 ['ENSG00000119661|ENST00000553645|DNAL1', 'nc|ENSG00000119661|Q4LDG9-3|DNAL1', 'nc|ENSG00000119661|Q4LDG9-2|DNAL1'] 77296 15233 NYKDLNGNVF True PC9_epitope_Rep1 1182.5669371011797 1182.5658499358601 63.414 2 -0.05822007544128072 0.01813878517067597 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 118396 9769 VDLGVLGK True H1975_Epitope_Rep3 799.4803539429099 799.47924993586 42.6 2 -0.05823322232580637 0.01813878517067597 0.9438714419765777 ['ENSG00000079739|ENST00000371084|PGM1', 'nc|ENSG00000079739|P36871-2|PGM1'] 98124 9767 SIARPLSLL True H1975_Epitope_Rep2 968.6018660579199 968.60076993586 42.555 2 -0.05841706815810652 0.01817699620547554 0.9438714419765777 ['ENST00000554302.1_1_15:91498777-91498930:+|nuORF'] 110000 8001 THTQPGVQL True PC9_epitope_Rep3 979.5086939490698 979.50758993586 35.752 2 -0.05842392480891666 0.01817699620547554 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6', 'SEPTIN6|p.Q82E|1|0.55|ENSG00000125354|chrX:119663579-119663579|G/C|missense_variant'] 58284 11614 LETFLESAP True H1975_Epitope_Rep3 1005.5018772331299 1005.50078993586 49.805 2 -0.05844343290584012 0.01817699620547554 0.9438714419765777 ['nc|ENSG00000171044|Q5GH73-2|XKR6', 'ENSG00000171044|ENST00000416569|XKR6', 'XKR6|p.L303P|1|0.28|ENSG00000171044|chr8:10924687-10924687|A/G|missense_variant'] 123214 17451 VHLETILGA True PC9_epitope_Rep5 951.5389314481898 951.53782993586 72.124 2 -0.05847604124807241 0.01817699620547554 0.9438714419765777 ['ENSG00000165591|ENST00000374900|FAAH2'] 137852 11203 YPIEHGIITN True PC9_epitope_Rep2 1155.5924235730297 1155.5913299358601 48.419 2 -0.058482219915840135 0.01817699620547554 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 46763 14421 IVCDVPSASA True PC9_epitope_Rep1 960.45863252216 960.45752993586 60.294 2 -0.05849657675947495 0.01817699620547554 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 114250 8234 TRYQIPKEV True PC9_epitope_Rep4 1132.6240580544797 1132.62241490379 39.134 3 -0.05850766128854046 0.01817699620547554 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L'] 38112 6841 HEPEPHIL True PC9_epitope_Rep4 970.4872302285 970.48612993586 33.535 2 -0.05852804715132608 0.01819331416100675 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 83881 12277 QEIATVVVP True NCI_RA007_Epitope_Rep3 954.5385970950199 954.53750993586 55.453 2 -0.05858647721453073 0.01819331416100675 0.9438714419765777 ['ENSG00000139233|ENST00000266604|LLPH'] 113018 14660 TPTPVPVV True PC9_epitope_Rep4 808.4694549060399 808.46834993586 64.323 2 -0.058608647332803916 0.01819331416100675 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 41221 10085 IADRPLYL True H1975_Epitope_Rep1 959.54401682863 959.54290993586 43.728 2 -0.05861741569524209 0.01819331416100675 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-2|RASSF5'] 105510 17506 SVDETLRLVQA True PC9_epitope_Rep5 1229.66156576201 1229.6604699358602 72.339 2 -0.05865824390453876 0.01819331416100675 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF', 'ENSG00000123131|ENST00000379341|PRDX4'] 119148 12501 VEIPDPVEA True H1975_Epitope_Rep2 967.4862271689899 967.48512993586 53.176 2 -0.0586756329360337 0.01819331416100675 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 126914 9844 VPVDTGVAA True PC9_epitope_Rep2 827.4388830537498 827.43778993586 43.2 2 -0.058710899101718894 0.01819331416100675 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 117105 12545 TYSEKTTLF True PC9_epitope_Rep4 1088.5389910178399 1088.5378899358602 56.073 2 -0.058722761342397685 0.01819331416100675 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 84748 11113 QHGPPNIVV True PC9_epitope_Rep5 959.51886470995 959.51776993586 47.736 2 -0.05872298733310324 0.01819331416100675 0.9438714419765777 ['ENSG00000124209|ENST00000244040|RAB22A'] 132386 19609 VYNAVLELF True NCI_RA007_Epitope_Rep4 1066.5698972233 1066.5688099358601 84.735 2 -0.058759321911757346 0.01819331416100675 0.9438714419765777 ['nc|ENSG00000134242|Q9Y2R2-6|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-2|PTPN22', 'ENST00000484147.5_1_1:114375712-114414257:-|nuORF', 'nc|ENSG00000134242|Q9Y2R2-4|PTPN22', 'nc|ENSG00000134242|Q9Y2R2|PTPN22', 'ENSG00000134242|ENST00000359785|PTPN22'] 132123 11697 VYIRGSKIRF True PC9_epitope_Rep5 1237.7295261825295 1237.72789490379 49.989 3 -0.05880949525115935 0.01819331416100675 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 34378 12991 GPSVFLFPPK True NCI_RA007_Epitope_Rep5 1087.6066170851898 1087.6055299358602 56.648 2 -0.05886280107333444 0.018232990699951053 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 29735 20388 FVPQFISQL True PC9_epitope_Rep6 1077.5858816406098 1077.58478993586 91.121 2 -0.05888415343930554 0.018232990699951053 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 39087 13819 HLAIKLEQV True PC9_epitope_Rep3 1049.62332977849 1049.62222993586 58.235 2 -0.05890517459758625 0.018232990699951053 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 44513 17829 IPAALPVAA True PC9_epitope_Rep5 821.50108938749 821.49998993586 73.598 2 -0.0590656840484204 0.018272662384011422 0.9438714419765777 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.L269Pfs*11|1|0.15|ENSG00000145715|chr5:87332616-87332620|TTACT/-|frameshift_variant', 'RASA1|p.N407Sfs*3|1|0.22|ENSG00000145715|chr5:87349329-87349332|CAAT/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1', 'RASA1|p.L146Sfs*24|1|0.5|ENSG00000145715|chr5:87268885-87268897|CTTTGGGGGCGGG/-|frameshift_variant'] 77311 14827 NYKKFYEQF True PC9_epitope_Rep1 1265.6080736371698 1265.60641490379 61.853 3 -0.05907832317616506 0.018272662384011422 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 94516 14681 RYIDRIHIF True PC9_epitope_Rep4 1231.68257599011 1231.68094490379 64.405 3 -0.05909346760580286 0.018272662384011422 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 2619 4293 AESPDARRPLP True H1975_Epitope_Rep3 1207.6309343400699 1207.62928490379 21.628 3 -0.0591688897770952 0.018290817887074082 0.9438714419765777 ['ENST00000552943.5_1_16:699416-703842:+|nuORF'] 71 19184 AAAGVFALL True NCI_RA007_Epitope_Rep5 831.4854393233499 831.48489496793 80.659 1 -0.0591839846759157 0.018290817887074082 0.9438714419765777 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000436236.1_1_3:31638325-31661336:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 4003 14844 AHGVSLVL True PC9_epitope_Rep1 794.46503823194 794.46394993586 61.917 2 -0.05919193787881223 0.018290817887074082 0.9438714419765777 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 35578 13463 GTIGLIHAV True PC9_epitope_Rep6 879.51780208079 879.51670993586 63.477 2 -0.059222058316692555 0.018290817887074082 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 101511 10782 SPAAPVITA True PC9_epitope_Rep6 825.45961849833 825.45852993586 52.304 2 -0.05928505828951859 0.018290817887074082 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 101953 9488 SPLSTPTSA True PC9_epitope_Rep5 859.42871229287 859.42760993586 41.451 2 -0.05931377060570039 0.018290817887074082 0.9438714419765777 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'ENSG00000167775|ENST00000301458|CD320', 'nc|ENSG00000167775|Q9NPF0-2|CD320'] 2671 7217 AETAAVTVAA True H1975_Epitope_Rep3 902.4709114580199 902.46980993586 32.731 2 -0.059332725704347326 0.01830747589243848 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 660 19329 AATSVTFVGV True PC9_epitope_Rep2 950.5072969667399 950.50618993586 79.723 2 -0.05935140527940212 0.01830747589243848 0.9438714419765777 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF'] 103958 10566 SRPYLVEL True NCI_RA007_Epitope_Rep3 975.5389314481899 975.53782993586 48.615 2 -0.0593515809357724 0.01830747589243848 0.9438714419765777 ['ENSG00000109265|ENST00000682029|CRACD'] 113797 8886 TRDSNIIRL True PC9_epitope_Rep4 1086.61455599994 1086.6134499358602 41.712 2 -0.05939582867979073 0.01830747589243848 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS'] 16656 7329 EETIEKMQE True PC9_epitope_Rep5 1135.5067049133897 1135.50560993586 33.15 2 -0.05944326480434798 0.01830747589243848 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000443413.1_1_X:91931520-91931646:-|nuORF', 'ENST00000584441.5_2_17:8280884-8281016:-|nuORF', 'ENST00000495104.1_1_4:165841772-165841955:-|nuORF', 'ENST00000584906.5_1_17:8280884-8283916:-|nuORF'] 37245 20424 GVVFSVTTV True PC9_epitope_Rep2 907.5014833103099 907.50038993586 83.988 2 -0.059485172257516615 0.01830747589243848 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4', 'ENST00000489758.1_1_1:25072044-25124343:+|nuORF'] 125171 10071 VLQALEGLK True NCI_RA007_Epitope_Rep5 969.5858816406098 969.58478993586 45.375 2 -0.05952357275164491 0.01830747589243848 0.9438714419765777 ['ENSG00000105372|ENST00000598742|RPS19', 'ENST00000457967.1_1_1:113711848-113712022:+|nuORF'] 90457 15443 RISLPLPNF True NCI_RA007_Epitope_Rep5 1055.61276509479 1055.6116699358602 66.105 2 -0.05953412697205928 0.01830747589243848 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000469543.5_1_10:17277782-17277908:+|nuORF'] 118376 6087 VDITTPKAA True NCI_RA007_Epitope_Rep4 914.5072969667399 914.50618993586 30.029 2 -0.059560336271510604 0.01830747589243848 0.9438714419765777 ['ENSG00000164985|ENST00000380733|PSIP1', 'ENST00000487363.5_1_9:15485934-15510186:-|nuORF', 'PSIP1|p.K246Afs*3|1|0.34|ENSG00000164985|chr9:15474127-15474131|TCTTT/-|frameshift_variant', 'nc|ENSG00000164985|O75475-3|PSIP1', 'nc|ENSG00000164985|O75475-2|PSIP1', 'ENST00000422292.2_1_9:15055292-15055805:+|nuORF'] 34833 11045 GQVGGEINV True PC9_epitope_Rep6 871.43994568291 871.43884993586 53.395 2 -0.05956692082100894 0.01830747589243848 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENSG00000128422|ENST00000311208|KRT17', 'CON__Q04695', 'CON__Q9QWL7', 'ENST00000399211.7_1_17:16744211-16749072:-|nuORF'] 16357 7014 EEKVLNLK True H1975_Epitope_Rep3 971.5651461960299 971.56404993586 31.944 2 -0.059636047462476055 0.018347875723721766 0.9438714419765777 ['ENSG00000230453|ENST00000684830|ANKRD18B', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B'] 65347 3996 LSENEQNTIEK True NCI_RA007_Epitope_Rep2 1303.62557417611 1303.6244699358601 20.181 2 -0.05966211727259359 0.01836564137059459 0.9438714419765777 ['ENSG00000023516|ENST00000025301|AKAP11'] 77328 14613 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.60641490379 61.209 3 -0.05967009418755302 0.01836564137059459 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 31466 14327 GEEETFPIP True H1975_Epitope_Rep2 1017.4654917244098 1017.46438993586 60.259 2 -0.059675013439847914 0.01836564137059459 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1'] 107928 11353 TAVTVNQSL True PC9_epitope_Rep4 931.4974605590301 931.49691496793 51.447 1 -0.05969988217295966 0.01836564137059459 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 115595 13309 TVIENIHTI True PC9_epitope_Rep4 1038.57095985246 1038.5698699358602 59.087 2 -0.059723044255924354 0.01836564137059459 0.9438714419765777 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.M899Nfs*19|2|0.32|ENSG00000162402|chr1:55141670-55141671|-/T|frameshift_variant'] 39974 11920 HQQSIPAVL True PC9_epitope_Rep4 991.5450794577898 991.5445349679301 53.633 1 -0.05972441471259896 0.01836564137059459 0.9438714419765777 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 113080 6611 TPYKQEINA True PC9_epitope_Rep3 1062.53457434374 1062.53346993586 30.454 2 -0.05975063727995328 0.01836564137059459 0.9438714419765777 ['ENSG00000138356|ENST00000374700|AOX1'] 63771 14311 LPSDIAAEA True PC9_epitope_Rep1 885.4443623570099 885.44326993586 59.871 2 -0.059839236231101635 0.018384526017569246 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 106767 18261 SYFRWRETL True PC9_epitope_Rep5 1256.6302060640796 1256.62855490379 75.255 3 -0.059847107719046166 0.018384526017569246 0.9438714419765777 ['ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6'] 110451 15509 TIPEAFRGV True PC9_epitope_Rep1 988.5341804209198 988.5336349679301 64.478 1 -0.059864288892316125 0.018384526017569246 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 45656 14919 ISIPAVQKV True PC9_epitope_Rep5 953.5909670210499 953.58986993586 62.39 2 -0.05989281425686302 0.018384526017569246 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 95076 14066 RYSRKGFLF True PC9_epitope_Rep1 1172.6454622053998 1172.6438249037901 58.942 3 -0.05990069010072226 0.01840453285504647 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 106343 18226 SVSFQDVTV True PC9_epitope_Rep1 980.4814761417199 980.48036993586 74.898 2 -0.05991360652064639 0.018421910661884578 0.9438714419765777 ['ENSG00000196597|ENST00000481138|ZNF782', 'nc|ENSG00000274349|Q5TYW1-2|ZNF658', 'ENSG00000274349|ENST00000621410|ZNF658', 'ENST00000377618.4_9:39444499-39464431:-|nuORF'] 24359 6870 FAEDLTNR True PC9_epitope_Rep1 964.46140940348 964.46030993586 31.23 2 -0.05991505725776456 0.018421910661884578 0.9438714419765777 ['ENSG00000136051|ENST00000332180|WASHC4', 'nc|ENSG00000136051|Q2M389-2|WASHC4', 'ENST00000311317.8_1_12:105501518-105541426:+|nuORF'] 37487 14444 GYEPPVQESV True PC9_epitope_Rep3 1103.51350454599 1103.5124099358602 60.664 2 -0.05992059904194927 0.018421910661884578 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 24137 18220 EYSKYLQQAF True PC9_epitope_Rep1 1275.6135529404298 1275.61244993586 74.875 2 -0.05993831497627563 0.018421910661884578 0.9438714419765777 ['nc|ENSG00000162702|Q9Y2X9-2|ZNF281', 'ENSG00000162702|ENST00000367353|ZNF281'] 63260 17113 LPALAGVSA True PC9_epitope_Rep4 797.46470387877 797.46360993586 73.829 2 -0.05994746668170581 0.018421910661884578 0.9438714419765777 ['ENST00000336985.10_2_22:45098108-45098258:+|nuORF'] 109834 14832 THLGPLASL True PC9_epitope_Rep6 907.51271670035 907.51160993586 69.025 2 -0.0599536369029547 0.018421910661884578 0.9438714419765777 ['ENSG00000127399|ENST00000359623|LRRC61'] 138412 12190 YRDPYSGSTI True PC9_epitope_Rep5 1157.53530261973 1157.5342099358602 51.878 2 -0.05996246910983417 0.018421910661884578 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 4901 19034 ALGLAISLD True PC9_epitope_Rep1 871.50148331031 871.50038993586 78.005 2 -0.0600269052608941 0.018421910661884578 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 33115 11298 GKLFMAQAL True NCI_RA007_Epitope_Rep3 977.5368232732097 977.53572993586 51.55 2 -0.06007477260175678 0.01843815577694925 0.9438714419765777 ['RAD21-EIF3H|4|fusion', 'RAD21-EIF3H|2|fusion', 'RAD21-EIF3H|1|fusion', 'RAD21-EIF3H|3|fusion', 'ENSG00000147677|ENST00000521861|EIF3H'] 119564 10070 VERGQTKTI True PC9_epitope_Rep1 1030.5771078620598 1030.5760099358602 43.606 2 -0.060077405463252825 0.01843815577694925 0.9438714419765777 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000412120.2_1_1:1853728-1858343:-|nuORF', 'ENST00000464311.5_1_1:1853728-1858229:-|nuORF'] 123857 10062 VIYPYVYEK True NCI_RA007_Epitope_Rep5 1172.6117620352795 1172.6106699358602 45.342 2 -0.06012879443156732 0.01843815577694925 0.9438714419765777 ['ENSG00000127954|ENST00000380079|STEAP4'] 54710 14419 LAEIEETL True PC9_epitope_Rep3 916.47532813212 916.47422993586 60.568 2 -0.060140670833093414 0.01843815577694925 0.9438714419765777 ['PNMA8A|p.Q36L|1|0.32|ENSG00000182013|chr19:46470929-46470929|T/A|missense_variant'] 7789 20176 [Acetylation]-ASVSELAC[Carbamidomethyl]IY True H1975_Epitope_Rep3 1153.53252633414 1153.5314299358602 84.397 2 -0.06017611759007085 0.01843815577694925 0.9438714419765777 ['nc|ENSG00000137818|P05386-2|RPLP1', 'ENSG00000137818|ENST00000260379|RPLP1', 'ENST00000487304.6_1_15:69745218-69746066:+|nuORF'] 90387 21287 RILDYVINL True PC9_epitope_Rep2 1117.64954452633 1117.64844993586 87.344 2 -0.060242426694055745 0.01843815577694925 0.9438714419765777 ['nc|ENSG00000153832|Q8NEA4-3|FBXO36', 'ENSG00000153832|ENST00000283946|FBXO36'] 99099 13160 SLAEGSVTSV True PC9_epitope_Rep5 948.47639076128 948.47528993586 55.625 2 -0.0602637370586743 0.01843815577694925 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 68793 15286 LVDPYMHEV True PC9_epitope_Rep1 1101.51648175145 1101.5153899358602 63.62 2 -0.06026625936519074 0.01843815577694925 0.9438714419765777 ['ENSG00000064313|ENST00000378164|TAF2'] 73991 10574 NHQGATPLVL True PC9_epitope_Rep6 1048.56654317836 1048.5654499358602 51.481 2 -0.06029260765016189 0.01843815577694925 0.9438714419765777 ['ENSG00000186106|ENST00000335659|ANKRD46', 'nc|ENSG00000186106|Q86W74-1|ANKRD46'] 34888 8100 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 36.134 2 -0.060296297383403905 0.01843815577694925 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 137855 10715 YPIEHGIITN True PC9_epitope_Rep4 1155.5924235730297 1155.5913299358601 48.969 2 -0.06034715259328541 0.01843815577694925 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 5249 17180 ALQPLPAT True PC9_epitope_Rep3 809.46470387877 809.46360993586 71.24 2 -0.06036352874877645 0.018457025281642798 0.9438714419765777 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1', 'nc|ENSG00000103932|Q9BWH6-3|RPAP1'] 102300 6238 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 29.393 2 -0.060365765573401925 0.018457025281642798 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 57735 5736 LENM[Oxidation]PSAEA True H1975_Epitope_Rep1 976.4171620134399 976.41606993586 27.133 2 -0.06038951633340044 0.018457025281642798 0.9438714419765777 ['ENSG00000132912|ENST00000447998|DCTN4', 'nc|ENSG00000132912|Q9UJW0-3|DCTN4', 'ENST00000519313.5_1_5:150110976-150138143:-|nuORF'] 128202 10846 VRVDRDYVL True PC9_epitope_Rep2 1133.61930702721 1133.61766490379 47.036 3 -0.06039596509403584 0.018457025281642798 0.9438714419765777 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2'] 53814 15116 KYFLWVVKF True NCI_RA007_Epitope_Rep3 1228.7008518231999 1228.6997499358602 66.959 2 -0.06041169655322698 0.018473257566499653 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 17386 10172 EHFDASHVAL True PC9_epitope_Rep6 1124.5250722892 1124.52343490379 49.757 3 -0.060411878337680594 0.018473257566499653 0.9438714419765777 ['ENSG00000164062|ENST00000296456|APEH'] 27585 12566 FPRPVTVEP True PC9_epitope_Rep4 1040.5654805492 1040.5643899358602 56.159 2 -0.06041620125009268 0.018473257566499653 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 21266 5804 ERIMKAQAL True PC9_epitope_Rep2 1058.5906497512199 1058.58954993586 27.719 2 -0.06042096765547609 0.018473257566499653 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 132489 12489 VYPEKLATKF True PC9_epitope_Rep1 1194.6648602372995 1194.66376993586 52.907 2 -0.06043841600374088 0.018473257566499653 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 119803 5412 VEVESRNSPE True NCI_RA007_Epitope_Rep2 1144.53603089572 1144.5349299358602 25.671 2 -0.06044580416888485 0.018473257566499653 0.9438714419765777 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 104960 20829 STIAILNSV True PC9_epitope_Rep1 916.5229470308801 916.52184993586 84.946 2 -0.06044837475747628 0.018473257566499653 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 8658 17730 AVASVLSFL True H1975_Epitope_Rep3 905.52221875489 905.52167496793 74.125 1 -0.06045397381750891 0.018473257566499653 0.9438714419765777 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'nc|ENSG00000169247|Q8TF17-4|SH3TC2', 'SH3TC2|p.Q788Sfs*21|1|0.41|ENSG00000169247|chr5:149027371-149027371|C/-|frameshift_variant', 'ENST00000504517.5_1_5:148386573-148411207:-|nuORF'] 44576 19194 IPFGITEEA True PC9_epitope_Rep4 975.49131254943 975.49020993586 81.929 2 -0.06046310854632657 0.018473257566499653 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 120679 12018 VGAPKIPSV True PC9_epitope_Rep4 866.5225531080599 866.52144993586 54.027 2 -0.06046857626525698 0.018473257566499653 0.9438714419765777 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 33186 13849 GKVQIPIML True NCI_RA007_Epitope_Rep5 997.5994235297699 997.59832993586 59.946 2 -0.06047543106417033 0.018473257566499653 0.9438714419765777 ['ENSG00000106615|ENST00000262187|RHEB', 'ENST00000262187.9_1_7:151168500-151168661:-|nuORF', 'ENST00000448647.2_1_10:46914432-46914702:+|nuORF'] 140508 15742 YYINKISSTL True PC9_epitope_Rep4 1200.63903941228 1200.6379499358602 68.475 2 -0.06047979192579547 0.01849324833499664 0.9438714419765777 ['ENST00000490672.1_1_1:155141918-155142388:-|nuORF', 'ENST00000463527.5_1_1:155141918-155144917:-|nuORF', 'ENST00000471891.5_1_1:155141918-155145146:-|nuORF', 'ENST00000497317.5_1_1:155141918-155145314:-|nuORF', 'ENST00000482246.5_1_1:155141918-155145739:-|nuORF', 'ENSG00000163463|ENST00000295682|KRTCAP2', 'nc|ENSG00000163463|Q8N6L1-2|KRTCAP2'] 109544 5122 THAPATLEA True PC9_epitope_Rep2 909.45559574705 909.45448993586 25.078 2 -0.060529667021813 0.018508337914605093 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 109135 22646 TFLDDSGSLNW True PC9_epitope_Rep5 1253.5564319871298 1253.55532993586 92.108 2 -0.06053383498225466 0.018508337914605093 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 138041 4310 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 22.997 2 -0.060557786907399075 0.018508337914605093 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 44772 10445 IPTENSMTA True PC9_epitope_Rep1 962.43789707758 962.43678993586 45.065 2 -0.060574610735830536 0.018508337914605093 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 81970 11262 PSRAQLPSL True PC9_epitope_Rep5 967.5450794577899 967.5439899358599 48.31 2 -0.060584573621201246 0.018508337914605093 0.9438714419765777 ['ENST00000389851.8_2_4:1341218-1341545:+|nuORF'] 132877 12126 VYTSGVYHI True PC9_epitope_Rep4 1037.51819600361 1037.5170899358602 54.453 2 -0.06058534309365052 0.018508337914605093 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 82413 16232 PVAPAVPTV True PC9_epitope_Rep2 849.49600400705 849.49490993586 67.681 2 -0.060587442266156796 0.018508337914605093 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 21745 15762 ESAVDLFSY True H1975_Epitope_Rep2 1029.46549172441 1029.46497496793 65.805 1 -0.060627666965234965 0.018508337914605093 0.9438714419765777 ['ENST00000467753.1_1_6:127838909-127839799:-|nuORF', 'ENST00000481848.6_2_6:127837845-127839799:-|nuORF', 'ENST00000525778.5_2_6:127839703-127839799:-|nuORF'] 138051 19278 YQDPSVLYI True PC9_epitope_Rep6 1096.54407639828 1096.5429699358601 86.799 2 -0.06064512435710283 0.018508337914605093 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'ENST00000471235.1_1_12:48181791-48181944:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 34542 4715 GQEVNELKT True NCI_RA007_Epitope_Rep4 1016.51383889916 1016.51274993586 24.567 2 -0.060647363294204566 0.018508337914605093 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 82506 9469 PVESDVEAP True H1975_Epitope_Rep3 941.4341915961298 941.43308993586 41.426 2 -0.060668158545972864 0.018508337914605093 0.9438714419765777 ['ENSG00000168143|ENST00000306858|FAM83B', 'FAM83B|p.M1000Ifs*12|1|0.2|ENSG00000168143|chr6:54941969-54941970|-/T|frameshift_variant', 'FAM83B|p.K141Rfs*2|1|0.3|ENSG00000168143|chr6:54870665-54870665|G/-|frameshift_variant'] 77694 10393 PAAATVAVA True PC9_epitope_Rep1 769.4334037504899 769.4328549679301 44.861 1 -0.060684047510355915 0.018508337914605093 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 106330 7571 SVSDGIHSV True PC9_epitope_Rep5 899.4348603024702 899.43376993586 34.07 2 -0.06074643328690846 0.018508337914605093 0.9438714419765777 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 9955 8029 AYRQGHFTY True PC9_epitope_Rep3 1141.53049202281 1141.52884490379 35.859 3 -0.060767043216440594 0.018508337914605093 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 24067 15823 EYQKVWNLF True NCI_RA007_Epitope_Rep2 1225.6131590176099 1225.61206993586 66.264 2 -0.06080251731915114 0.01852756739148139 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 75200 15273 NNWLRVVPR True PC9_epitope_Rep5 1152.6516102149997 1152.64996490379 63.757 3 -0.06081085324463713 0.01852756739148139 0.9438714419765777 ['nc|ENSG00000095713|Q9NQ79-3|CRTAC1', 'nc|ENSG00000095713|Q9NQ79-2|CRTAC1', 'ENSG00000095713|ENST00000370597|CRTAC1'] 100234 22368 SLLPAIVEL True PC9_epitope_Rep4 953.57973363101 953.57862993586 94.272 2 -0.060831621819947224 0.01852756739148139 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 73189 8971 NEEMSGLPA True H1975_Epitope_Rep2 946.4065969492998 946.40604496793 39.461 1 -0.0609229601265133 0.018565641349266127 0.9438714419765777 ['ENSG00000197601|ENST00000354817|FAR1'] 91515 5974 RPAAGFVA True PC9_epitope_Rep4 787.4340724568299 787.43296993586 29.926 2 -0.060982642073878705 0.018565641349266127 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 39710 11090 HPVEDGIMDA True PC9_epitope_Rep5 1082.47025983502 1082.46916993586 47.646 2 -0.060995485223764766 0.018565641349266127 0.9438714419765777 ['ENSG00000116251|ENST00000234875|RPL22', 'ENST00000469811.1_1_14:77352823-77353039:-|nuORF'] 80660 11981 PLPPPPPPP True PC9_epitope_Rep2 907.51673945163 907.51564993586 51.405 2 -0.06101115772309509 0.018565641349266127 0.9438714419765777 ['ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A', 'ENSG00000204334|ENST00000697325|ERICH2', 'ENSG00000146083|ENST00000274811|RNF44', 'nc|ENSG00000146083|Q7L0R7-2|RNF44', 'ENST00000508478.1_1_5:175957081-175957609:-|nuORF', 'ENST00000508096.1_1_10:126605730-126631034:+|nuORF', 'SVA_D_dup132|chr1:226114299-226115980:-|1.3983671137746794|0.0922211982552955|3.92|465.0|32|3|sense', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138771|ENST00000296043|SHROOM3', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000110076|P58401|NRXN2', 'ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'ENSG00000100312|ENST00000216139|ACR', 'nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.V1728Lfs*60|1|0.13|ENSG00000009694|chrX:124405213-124405219|AAGTGAC/-|frameshift_variant', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1', 'nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'TRERF1|p.E818Afs*14|1|0.26|ENSG00000124496|chr6:42256986-42256987|-/TG|frameshift_variant', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENST00000596700.5_1_19:50084718-50093643:+|nuORF', 'ENST00000597121.5_1_19:50086773-50093643:+|nuORF', 'ENSG00000126460|ENST00000246794|PRRG2', 'RBM15B|p.S844Pfs*27|1|0.57|ENSG00000259956|chr3:51393922-51393922|G/-|frameshift_variant', 'ENSG00000259956|ENST00000563281|RBM15B'] 31419 5827 GEDIRKQLP True H1975_Epitope_Rep2 1054.5771078620598 1054.5760099358602 27.404 2 -0.061017873475326785 0.018565641349266127 0.9438714419765777 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7674005-7689702:+|nuORF'] 978 8109 AEAAVVAVA True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 36.141 1 -0.061033680396925125 0.018565641349266127 0.9438714419765777 ['ENSG00000211450|ENST00000534355|SELENOH'] 24582 20371 FALSGPLFL True H1975_Epitope_Rep3 963.5429541994699 963.54184993586 85.176 2 -0.06103515916966867 0.018565641349266127 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 20339 12063 EPGFSEVLP True H1975_Epitope_Rep2 973.4756624852898 973.47511496793 51.482 1 -0.06104792980388047 0.018584485110020966 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 130374 19616 VTVFGYSIVI True PC9_epitope_Rep5 1096.61684741572 1096.61574993586 80.506 2 -0.06105032267443128 0.018584485110020966 0.9438714419765777 ['ENSG00000109927|ENST00000392793|TECTA'] 76076 7069 NRMDGTYAC True PC9_epitope_Rep3 1029.4008003762099 1029.39970993586 32.2 2 -0.06111791517257194 0.018584485110020966 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 44108 20838 ILMQGMNILI True PC9_epitope_Rep5 1144.63482306232 1144.6337299358602 85.202 2 -0.0611200732726981 0.018584485110020966 0.9438714419765777 ['DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant'] 45961 4172 ISSPTETER True PC9_epitope_Rep1 1018.49310345458 1018.49200993586 20.945 2 -0.06115504521658593 0.018601432758059266 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 120417 17804 VFTEVANLF True NCI_RA007_Epitope_Rep4 1038.53859709502 1038.53750993586 77.088 2 -0.06120818727679532 0.018601432758059266 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'nc|ENSG00000127511|O75182-3|SIN3B'] 106327 6811 SVSDGIHSV True PC9_epitope_Rep2 899.4348603024702 899.43376993586 31.604 2 -0.061242837549455115 0.018601432758059266 0.9438714419765777 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 14189 10699 DSSVSEAISY True H1975_Epitope_Rep2 1056.46113461996 1056.46057496793 46.179 1 -0.06125286407323148 0.018601432758059266 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2'] 123215 17543 VHLETILGA True PC9_epitope_Rep5 951.5389314481898 951.53782993586 72.487 2 -0.061260357379883154 0.018601432758059266 0.9438714419765777 ['ENSG00000165591|ENST00000374900|FAAH2'] 116146 20604 TVTDSMFAV True PC9_epitope_Rep3 969.4477334852899 969.44662993586 84.521 2 -0.061265524852644374 0.018601432758059266 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 34434 17032 GPYKIILTA True PC9_epitope_Rep1 974.5800679841799 974.57896993586 70.337 2 -0.06129136331329442 0.018601432758059266 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 77417 20342 NYMPGQLTI True PC9_epitope_Rep2 1035.5059170677498 1035.50537496793 83.667 1 -0.06138416818091147 0.018601432758059266 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 26744 15234 FLDGNEMTL True NCI_RA007_Epitope_Rep5 1038.46919720586 1038.46808993586 65.281 2 -0.06142116683516054 0.018601432758059266 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 47668 23239 IYPPLLGALSF True PC9_epitope_Rep4 1189.6746966450098 1189.67358993586 97.632 2 -0.06149390483429225 0.01863530943565122 0.9438714419765777 ['ENST00000380338.8_1_9:20622330-20622507:-|nuORF'] 29728 16040 FVPLPVSV True H1975_Epitope_Rep1 856.50584041476 856.50529496793 67.035 1 -0.06151450451136929 0.01863530943565122 0.9438714419765777 ['CON__P12763'] 32759 8506 GIAGSLKTV True PC9_epitope_Rep6 844.5018176634801 844.50072993586 42.452 2 -0.061528906331630114 0.01863530943565122 0.9438714419765777 ['ENSG00000008083|ENST00000341776|JARID2'] 30093 22905 FYPAIADLF True PC9_epitope_Rep4 1055.5327834385898 1055.5316899358602 96.323 2 -0.061538770180734184 0.01863530943565122 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 35123 8157 GRTTGIVM True PC9_epitope_Rep1 833.44292288837 833.44182993586 36.206 2 -0.06157131785376955 0.01863530943565122 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000415776.1_1_Y:19869357-19869702:-|nuORF', 'ACTB|p.S145P|1|0.2|ENSG00000075624|chr7:5528650-5528650|A/G|missense_variant', 'POTEF|p.D854V|1|0.47|ENSG00000196604|chr2:130074911-130074911|T/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 73190 9156 NEEMSGLPA True H1975_Epitope_Rep2 946.4065969492998 946.40604496793 40.17 1 -0.06158917099292783 0.01863530943565122 0.9438714419765777 ['ENSG00000197601|ENST00000354817|FAR1'] 68641 18840 LVAPPLPAA True PC9_epitope_Rep2 847.51673945163 847.51564993586 77.837 2 -0.061599280498756556 0.01863530943565122 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 113712 10106 TRDETNYGIP True PC9_epitope_Rep4 1164.5411162761598 1164.54000993586 46.544 2 -0.061605531491985124 0.01863530943565122 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 135286 16754 YAYTQALLL True H1975_Epitope_Rep2 1054.5698972233 1054.5688099358601 69.682 2 -0.06162607332687031 0.01863530943565122 0.9438714419765777 ['nc|ENSG00000157625|Q8N5C8-2|TAB3', 'ENSG00000157625|ENST00000288422|TAB3'] 100742 7147 SLRLDRVFHK True NCI_RA007_Epitope_Rep1 1269.73058881169 1269.72895490379 31.79 3 -0.061641460130186884 0.01863530943565122 0.9438714419765777 ['ENST00000380548.8_1_9:18770742-18777100:+|nuORF'] 103125 8586 SQLSMKAAL True NCI_RA007_Epitope_Rep4 947.51100244819 947.50990993586 39.809 2 -0.06166571690890706 0.01863530943565122 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'CON__P19001'] 139922 13150 YVFPGVTRL True H1975_Epitope_Rep2 1050.58621599378 1050.58567496793 55.703 1 -0.06166604196617404 0.01863530943565122 0.9438714419765777 ['nc|ENSG00000160284|Q9H0A9-2|SPATC1L', 'ENSG00000160284|ENST00000291672|SPATC1L'] 20336 11847 EPGFSEVLP True H1975_Epitope_Rep1 973.4756624852898 973.47511496793 50.568 1 -0.06166834947066485 0.01863530943565122 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 6445 7161 APSPATAAATA True PC9_epitope_Rep3 927.4661604307499 927.46506993586 32.558 2 -0.06167501426728431 0.01863530943565122 0.9438714419765777 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 126342 8268 VPKNSDPWAA True PC9_epitope_Rep4 1083.53490869691 1083.53380993586 39.263 2 -0.06168471222032678 0.01863530943565122 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 38600 10493 HHIGDRSLSL True PC9_epitope_Rep3 1133.59415490853 1133.5924949037899 45.301 3 -0.061699732317475234 0.01863530943565122 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion', 'ENST00000495619.1_1_2:183822183-183829436:-|nuORF'] 20212 13377 ENTLQLVRNI True NCI_RA007_Epitope_Rep2 1198.6669854956199 1198.6658899358602 56.673 2 -0.06171377999051541 0.01863530943565122 0.9438714419765777 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 77444 7562 NYNNQSSNF True PC9_epitope_Rep4 1086.4366512076201 1086.43554993586 36.464 2 -0.061732442395075124 0.01863530943565122 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 82414 16558 PVAPAVPTV True PC9_epitope_Rep3 849.49600400705 849.49490993586 68.831 2 -0.06173668321124128 0.018646170113259725 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 132775 15697 VYSQFITQL True NCI_RA007_Epitope_Rep5 1097.5757108797297 1097.57460993586 67.096 2 -0.06176997884522857 0.018646170113259725 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50', 'ENST00000496204.1_1_5:131931266-131935763:+|nuORF'] 23343 9099 EVTGPVIA True H1975_Epitope_Rep2 784.43306939732 784.43252496793 39.95 1 -0.061811662504959425 0.018646170113259725 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000583145.1_1_17:62747083-62747425:+|nuORF'] 48983 10345 KFDQLLAEEK True PC9_epitope_Rep2 1219.6448530687096 1219.6437499358601 45.118 2 -0.06182727560413608 0.018646170113259725 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 97605 16914 SHADVVNLL True PC9_epitope_Rep5 966.51344497634 966.51289496793 70.075 1 -0.06183463251223815 0.018646170113259725 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 40264 6391 HRLVESTSL True PC9_epitope_Rep4 1040.56145779792 1040.56036993586 31.673 2 -0.06184529296031386 0.018646170113259725 0.9438714419765777 ['ENSG00000076242|ENST00000231790|MLH1', 'nc|ENSG00000076242|P40692-2|MLH1', 'nc|ENSG00000076242|P40692-3|MLH1'] 127539 14183 VQVPHHLLSSV True PC9_epitope_Rep1 1214.6771562565002 1214.67550490379 59.377 3 -0.06184737340764305 0.018646170113259725 0.9438714419765777 ['ENST00000441339.2_11:69061685-69061946:+|nuORF'] 125404 6101 VLTEVDGK True PC9_epitope_Rep3 859.4650978015899 859.46400993586 28.514 2 -0.06186288602658338 0.018646170113259725 0.9438714419765777 ['ENSG00000150656|ENST00000358821|CNDP1'] 126488 12387 VPMSALKSV True PC9_epitope_Rep3 930.5208388559 930.51974993586 52.677 2 -0.06186778888532865 0.018646170113259725 0.9438714419765777 ['ENSG00000108256|ENST00000225388|NUFIP2'] 6417 13176 APSGNFVAC True PC9_epitope_Rep1 864.37998827864 864.37943496793 55.545 1 -0.061887210869336 0.018646170113259725 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 102900 5796 SQIDQQNSV True PC9_epitope_Rep4 1017.4727023631701 1017.47160993586 29.148 2 -0.06192058997557549 0.018646170113259725 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 74313 19961 NILEHLEQL True PC9_epitope_Rep4 1107.59242357303 1107.5913299358601 84.914 2 -0.06192093885316223 0.018646170113259725 0.9438714419765777 ['nc|ENSG00000109572|P51790-2|CLCN3'] 13402 11998 DNKTSQPITL True PC9_epitope_Rep2 1115.58225281215 1115.5811499358601 51.467 2 -0.061921701092586746 0.018646170113259725 0.9438714419765777 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2'] 29070 8820 FTPNNIKQV True PC9_epitope_Rep4 1059.57129420563 1059.57018993586 41.457 2 -0.06196617132817661 0.018646170113259725 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62496043-62497015:-|nuORF'] 40255 17385 HRLDEDWDSAL True PC9_epitope_Rep5 1355.6105928183101 1355.6094899358602 71.872 2 -0.062012090468439494 0.018646170113259725 0.9438714419765777 ['ENSG00000118217|ENST00000367942|ATF6'] 116897 14575 TYPDVNNSI True PC9_epitope_Rep1 1021.4716397340101 1021.47054993586 60.886 2 -0.062093056717977956 0.018646170113259725 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 79381 20974 PGLITLTIS True PC9_epitope_Rep4 913.5484335027301 913.54788496793 88.838 1 -0.062100766198291 0.018646170113259725 0.9438714419765777 ['ENSG00000159339|ENST00000375448|PADI4'] 127015 12441 VPYGEFKSV True PC9_epitope_Rep2 1024.5229470308798 1024.52184993586 53.16 2 -0.06212845654088892 0.018646170113259725 0.9438714419765777 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-3|MAPK7', 'ENST00000490660.2_1_17:19282213-19285121:+|nuORF', 'ENST00000572968.5_1_17:19282213-19283750:+|nuORF', 'ENST00000486905.1_1_17:19281885-19283261:+|nuORF'] 30096 21704 FYPAIADLF True PC9_epitope_Rep6 1055.5327834385898 1055.5316899358602 96.371 2 -0.062129405000227164 0.018646170113259725 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 120707 7579 VGARIYHTI True PC9_epitope_Rep2 1028.5767139392399 1028.57560993586 34.522 2 -0.062168675881364335 0.018646170113259725 0.9438714419765777 ['ENSG00000008394|ENST00000396210|MGST1', 'ENST00000539708.5_1_12:16513351-16516972:+|nuORF'] 110376 18857 TILPKVMQV True PC9_epitope_Rep5 1027.6099882134697 1027.6088899358601 77.551 2 -0.0621922488929479 0.018646170113259725 0.9438714419765777 ['ENSG00000140259|ENST00000267812|MFAP1', 'ENST00000484386.1_1_15:44097294-44102132:-|nuORF'] 5738 6226 APDEKYVAA True PC9_epitope_Rep3 962.4709114580199 962.46980993586 28.986 2 -0.06224819947965415 0.018646170113259725 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 45454 8423 ISEELVQKY True H1975_Epitope_Rep2 1107.5811901829898 1107.58008993586 37.35 2 -0.062256469516712945 0.018646170113259725 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 59824 15910 LHDITVPL True PC9_epitope_Rep4 906.51746772762 906.51636993586 69.125 2 -0.062266917103972315 0.018646170113259725 0.9438714419765777 ['ENSG00000133398|ENST00000255764|MED10', 'ENST00000504058.1_1_5:6377277-6378620:-|nuORF'] 17367 14915 EHDYTSVCL True PC9_epitope_Rep5 1065.44371073401 1065.4426099358602 62.374 2 -0.062270077278365546 0.018646170113259725 0.9438714419765777 ['ENSG00000173409|ENST00000310256|ARV1'] 74203 19636 NIANHFFTV True PC9_epitope_Rep5 1061.52942939365 1061.52887496793 80.585 1 -0.06237251596932375 0.018665365377577164 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 70604 19963 M[Oxidation]AAAWPLLL True H1975_Epitope_Rep2 1000.5415746809199 1000.54046993586 82.767 2 -0.062400530836816535 0.018665365377577164 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 138725 11165 YRYGREEML True PC9_epitope_Rep1 1215.57064258263 1215.56899490379 47.831 3 -0.06240335192141058 0.018665365377577164 0.9438714419765777 ['ENSG00000146830|ENST00000678049|GIGYF1', 'GIGYF1|p.E883Rfs*7|1|0.29|ENSG00000146830|chr7:100682436-100682436|C/-|frameshift_variant', 'nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000463554.5_1_2:233599907-233635753:+|nuORF', 'GIGYF2-EFHD1|1|fusion'] 34892 7640 GQVPPGESV True PC9_epitope_Rep4 868.42904664604 868.4279499358599 36.768 2 -0.0624766309938148 0.018696906881274643 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 13971 7543 DRNLQVSL True PC9_epitope_Rep3 943.50869394907 943.50758993586 34.014 2 -0.06248613487981752 0.018696906881274643 0.9438714419765777 ['ENSG00000142959|ENST00000372207|BEST4', 'ENST00000524877.5_1_11:61726936-61727579:+|nuORF', 'nc|ENSG00000127325|Q8N1M1-1|BEST3', 'ENSG00000167995|ENST00000378043|BEST1', 'nc|ENSG00000127325|Q8N1M1-5|BEST3', 'nc|ENSG00000127325|Q8N1M1-6|BEST3', 'ENSG00000127325|ENST00000330891|BEST3', 'nc|ENSG00000167995|O76090-3|BEST1'] 38849 12379 HIGDAVVI True PC9_epitope_Rep4 822.4599528515 822.45940496793 55.424 1 -0.06250379871546273 0.018696906881274643 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 28267 14184 FRVKYETEL True PC9_epitope_Rep3 1183.62372370131 1183.62208490379 59.644 3 -0.06257675853125602 0.018696906881274643 0.9438714419765777 ['CON__P05784', 'ENST00000411618.1_1_9:30800054-30800297:-|nuORF', 'ENST00000510488.1_1_3:141190162-141190471:-|nuORF', 'ENST00000585825.1_1_17:58887571-58888051:+|nuORF', 'ENST00000424695.1_1_1:238654935-238655424:+|nuORF', 'ENST00000434763.1_1_X:152869982-152870534:-|nuORF', 'ENSG00000111057|ENST00000388835|KRT18', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000581937.1_1_18:9678609-9679128:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 79966 21573 PITMTDSWSL True PC9_epitope_Rep5 1149.53761111885 1149.53650993586 88.02 2 -0.06258291719483666 0.018696906881274643 0.9438714419765777 ['nc|ENSG00000186716|P11274-2|BCR', 'ENSG00000186716|ENST00000305877|BCR', 'ENST00000436990.2_1_22:23654089-23657706:+|nuORF'] 11623 10199 DHARTITVAL True PC9_epitope_Rep6 1095.60365696307 1095.60254993586 49.873 2 -0.06260388868589949 0.018696906881274643 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 117123 11562 TYSPALNKMF True NCI_RA007_Epitope_Rep3 1170.5743309807401 1170.5732299358601 52.61 2 -0.06264209026951142 0.018696906881274643 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 81961 20100 PSQPQIIVV True PC9_epitope_Rep1 979.5702315764698 979.56912993586 82.142 2 -0.0626560777818779 0.018696906881274643 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4', 'ENST00000470175.1_1_1:35859216-35862664:+|nuORF'] 110040 5985 THVSNGCQL True PC9_epitope_Rep5 957.43381475665 957.43270993586 28.016 2 -0.06266047264573443 0.018696906881274643 0.9438714419765777 ['ENSG00000171223|ENST00000302754|JUNB'] 98317 9563 SIGGILAS True H1975_Epitope_Rep3 716.40685464948 716.40630496793 41.793 1 -0.06267490648953489 0.018696906881274643 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 17730 6267 EHSTEGSVSL True PC9_epitope_Rep4 1044.47236801 1044.4712699358602 31.158 2 -0.06267513471028244 0.018696906881274643 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 106382 18987 SVSTQLSLV True PC9_epitope_Rep2 932.51786165044 932.51731496793 78.399 1 -0.06269241034513034 0.018696906881274643 0.9438714419765777 ['ENSG00000214194|ENST00000397764|SMIM30'] 101015 8899 SLTGHISTV True PC9_epitope_Rep2 913.4868958753301 913.48578993586 39.586 2 -0.06271830126719673 0.018696906881274643 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'nc|ENSG00000171566|O43660-2|PLRG1'] 130189 8212 VTRVESLSP True NCI_RA007_Epitope_Rep4 986.53965972418 986.53856993586 38.375 2 -0.06272512516918712 0.018696906881274643 0.9438714419765777 ['nc|ENSG00000113073|Q96Q91|SLC4A9', 'nc|ENSG00000113073|Q96Q91-4|SLC4A9', 'nc|ENSG00000113073|Q96Q91-2|SLC4A9', 'ENSG00000113073|ENST00000506757|SLC4A9'] 138597 11137 YRQKQVVIL True PC9_epitope_Rep3 1145.6920780446499 1145.69044490379 47.838 3 -0.0627381554193109 0.018696906881274643 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 33673 12270 GLPRELAEA True PC9_epitope_Rep5 954.5134449763399 954.51234993586 52.185 2 -0.06273981099122138 0.018696906881274643 0.9438714419765777 ['ENSG00000126261|ENST00000246548|UBA2'] 94877 4519 RYNPRTNQW True NCI_RA007_Epitope_Rep3 1233.60030291813 1233.59866490379 24.633 3 -0.06274016669729401 0.018696906881274643 0.9438714419765777 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 106160 15406 SVPDPELIKTV True PC9_epitope_Rep6 1196.66525416012 1196.66414993586 71.414 2 -0.06280799775626056 0.018696906881274643 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 70856 5142 M[Oxidation]EGKVPVAA True H1975_Epitope_Rep3 916.4688036634798 916.46770993586 24.882 2 -0.0628190569388458 0.018696906881274643 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 74060 9114 NHSTLHSVF True PC9_epitope_Rep5 1040.5039429218 1040.50284993586 40.002 2 -0.06282960188255395 0.018696906881274643 0.9438714419765777 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'GIGYF2|p.T1245N|1|0.04|ENSG00000204120|chr2:232850311-232850311|C/A|missense_variant'] 6555 15158 APVPGIPTA True PC9_epitope_Rep4 821.46470387877 821.46360993586 66.233 2 -0.06283590074958678 0.018696906881274643 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 5788 8216 APFAAHGYGA True PC9_epitope_Rep4 960.4453654165198 960.44426993586 39.061 2 -0.06283840008295907 0.018696906881274643 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 95690 11609 SAYDGKDYI True PC9_epitope_Rep5 1030.46074069714 1030.4596499358602 49.651 2 -0.06290881220646267 0.018696906881274643 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 132042 23004 VYIDFPGGILS True PC9_epitope_Rep1 1179.6175756917098 1179.61646993586 93.28 2 -0.06291153427874036 0.018696906881274643 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 102093 8430 SPPVPGPSA True PC9_epitope_Rep2 807.41266830591 807.41156993586 37.795 2 -0.06294546686217203 0.01873717154063446 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 105885 21589 SVLDDFYTA True PC9_epitope_Rep1 1029.46549172441 1029.46497496793 87.865 1 -0.06302977824350277 0.018754825862559433 0.9438714419765777 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN', 'nc|ENSG00000101336|P08631-3|HCK', 'nc|ENSG00000101336|P08631-2|HCK', 'nc|ENSG00000101336|P08631-4|HCK', 'ENSG00000101336|ENST00000375852|HCK'] 41602 23734 IDFPGGILSF True PC9_epitope_Rep2 1064.55424715916 1064.55367496793 96.765 1 -0.06303248047171515 0.018754825862559433 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 6209 4188 APRAGAGMAAA True PC9_epitope_Rep5 942.4705346185398 942.46942993586 21.182 2 -0.0630352063721528 0.018754825862559433 0.9438714419765777 ['ENST00000375344.7_1_9:97136898-97137102:+|nuORF'] 113734 18221 TRDFANFVL True PC9_epitope_Rep6 1081.55564414149 1081.5545499358602 82.73 2 -0.06303764042970215 0.018754825862559433 0.9438714419765777 ['ENST00000474983.5_1_6:10529144-10530083:+|nuORF', 'GCNT2|p.K355Sfs*26|1|0.12|ENSG00000111846|chr6:10626460-10626460|A/-|frameshift_variant', 'ENSG00000111846|ENST00000495262|GCNT2'] 63274 13595 LPAPPAVSA True PC9_epitope_Rep4 821.46470387877 821.46360993586 60.186 2 -0.06313763397784612 0.018754825862559433 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9'] 140566 19493 YYLNLIEL True NCI_RA007_Epitope_Rep4 1039.5589981864298 1039.55847496793 84.243 1 -0.06313932621178434 0.018754825862559433 0.9438714419765777 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF'] 116247 14859 TVVAQLKQL True PC9_epitope_Rep1 998.6124307416198 998.61132993586 61.975 2 -0.06316243531148938 0.018754825862559433 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 68128 13697 LTPKLFHEV True PC9_epitope_Rep1 1082.6124307416198 1082.61132993586 57.537 2 -0.06317914538641771 0.018773619407533828 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000487214.1_1_1:889839-894659:-|nuORF'] 9601 13188 AYEHKFYEI True PC9_epitope_Rep5 1198.5658744720197 1198.56421490379 55.732 3 -0.06319592570493615 0.018773619407533828 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 137744 20874 YNLDAANGIVM True PC9_epitope_Rep3 1179.55940919259 1179.55830993586 85.564 2 -0.06321030740739055 0.018773619407533828 0.9438714419765777 ['ACAP2|p.V261L|1|0.12|ENSG00000114331|chr3:195320777-195320777|C/A|missense_variant'] 34881 8573 GQVPPGESV True PC9_epitope_Rep1 868.42904664604 868.4279499358599 37.813 2 -0.0632275211860963 0.018773619407533828 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 13427 4599 DNNRWRRR True NCI_RA007_Epitope_Rep4 1171.60711963407 1171.60546490379 24.101 3 -0.06326580515760893 0.01879317350670459 0.9438714419765777 ['ENST00000578774.1_1_17:38517261-38520175:+|nuORF'] 85981 18242 QPGEAWKELQV True PC9_epitope_Rep3 1283.65100107831 1283.64990993586 75.379 2 -0.0632998626222595 0.01879317350670459 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 47420 8808 IYIKQIKTF True NCI_RA007_Epitope_Rep5 1152.6906810623198 1152.68958993586 40.546 2 -0.06332716095860261 0.018812726016821747 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 77879 14297 PAGSFLLT True H1975_Epitope_Rep2 804.43815477776 804.43704993586 60.144 2 -0.06334243944322764 0.018812726016821747 0.9438714419765777 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 521 5333 AAPPAAAAAD True PC9_epitope_Rep5 824.4028318981999 824.40172993586 25.525 2 -0.06336505007393609 0.018831511802705887 0.9438714419765777 ['NOS1AP|p.E284Dfs*40|1|0.12|ENSG00000198929|chr1:162357046-162357047|AG/-|frameshift_variant'] 121587 13436 VGLADAGL True H1975_Epitope_Rep1 714.39120458534 714.39065496793 56.795 1 -0.06340140525496196 0.018831511802705887 0.9438714419765777 ['nc|ENSG00000157077|O95405-3|ZFYVE9', 'ENST00000361625.5_1_1:52698878-52729552:+|nuORF', 'nc|ENSG00000157077|O95405-2|ZFYVE9', 'ENSG00000157077|ENST00000287727|ZFYVE9'] 101548 9773 SPASPLSSA True PC9_epitope_Rep1 815.4024975450301 815.40140993586 42.453 2 -0.06340736692730913 0.018831511802705887 0.9438714419765777 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 105654 4309 SVFQQGMKNK True NCI_RA007_Epitope_Rep4 1165.5913780272097 1165.58974490379 22.919 3 -0.06343788014816999 0.018831511802705887 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000479960.1_1_1:116943772-116944278:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3'] 102092 8330 SPPVPGPSA True PC9_epitope_Rep2 807.41266830591 807.41156993586 37.412 2 -0.06347021663578992 0.018851060372145935 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 108501 11124 TEFLFHTA True NCI_RA007_Epitope_Rep5 964.46543215476 964.46432993586 49.424 2 -0.0634837776257727 0.018851060372145935 0.9438714419765777 ['ENSG00000065308|ENST00000182527|TRAM2'] 133232 8278 WEEAGPPSA True H1975_Epitope_Rep2 942.4083112014598 942.40720993586 36.792 2 -0.063536619527079 0.018867541329867177 0.9438714419765777 ['ENSG00000101191|ENST00000395343|DIDO1'] 44261 16633 ILTVIRTEP True PC9_epitope_Rep3 1040.62299542532 1040.62188993586 69.114 2 -0.06354809905524529 0.018867541329867177 0.9438714419765777 ['ENSG00000167360|ENST00000300778|OR51Q1'] 6956 14167 AQMDYYGTRL True PC9_epitope_Rep2 1216.55465816532 1216.5535699358602 59.762 2 -0.06355252675691281 0.018867541329867177 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000397102.5_1_3:10355120-10362775:-|nuORF', 'ENST00000397099.1_1_3:10357003-10360966:-|nuORF'] 29145 19097 FTVAELKQL True PC9_epitope_Rep2 1047.59644632431 1047.5953499358602 78.826 2 -0.06357301052985445 0.018867541329867177 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 2749 5102 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 24.695 2 -0.06357554401239485 0.018867541329867177 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 1972 6431 AEITNIRP True H1975_Epitope_Rep2 912.5028802926399 912.50178993586 29.658 2 -0.06359602541417449 0.018867541329867177 0.9438714419765777 ['ENSG00000132718|ENST00000368324|SYT11'] 30139 14942 FYQPKIQQF True PC9_epitope_Rep6 1197.61824439805 1197.6171499358602 69.478 2 -0.06361013334675221 0.018867541329867177 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 108915 7265 TESSQSFVA True H1975_Epitope_Rep2 954.4294405688598 954.42834993586 32.881 2 -0.06364420966802706 0.018867541329867177 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2'] 13752 11857 DQLLGDAVAV True H1975_Epitope_Rep2 999.5236753068699 999.52317496793 50.686 1 -0.0636895356846125 0.018867541329867177 0.9438714419765777 ['ENST00000490861.5_1_1:44435799-44436893:+|nuORF', 'nc|ENSG00000132768|Q9BQC3-2|DPH2', 'ENSG00000132768|ENST00000255108|DPH2', 'ENST00000471934.1_1_1:44435799-44436661:+|nuORF', 'ENST00000527567.1_1_1:44435799-44436540:+|nuORF'] 37488 13393 GYEPPVQESV True PC9_epitope_Rep4 1103.51350454599 1103.5124099358602 59.418 2 -0.06369720219667775 0.018867541329867177 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 12038 13049 DIDLDALAA True H1975_Epitope_Rep2 915.4549270407099 915.45382993586 55.315 2 -0.06377877939746954 0.01890777635614046 0.9438714419765777 ['ENSG00000158417|ENST00000289371|EIF5B'] 47936 14426 IYYTGKYQSL True PC9_epitope_Rep3 1234.6233893481399 1234.6222899358602 60.594 2 -0.06379818003105091 0.018925394955935506 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 84818 13911 QHLLDTNQL True PC9_epitope_Rep1 1080.5563724174801 1080.55526993586 58.344 2 -0.06380208019781274 0.018925394955935506 0.9438714419765777 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF', 'EHF|p.D69V|2|0.38|ENSG00000135373|chr11:34646547-34646547|A/T|missense_variant'] 95014 9727 RYQQWMERF True NCI_RA007_Epitope_Rep3 1342.6240751378198 1342.62296993586 45.331 2 -0.06381232768189547 0.018925394955935506 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 87584 11746 QTPQRLLEV True PC9_epitope_Rep6 1082.6084079903399 1082.60730993586 56.339 2 -0.06382087477953399 0.018925394955935506 0.9438714419765777 ['nc|ENSG00000133119|P40938-2|RFC3', 'ENSG00000133119|ENST00000380071|RFC3'] 76951 20846 NVPEGLLATV True PC9_epitope_Rep2 1011.56006081559 1011.5594749679301 85.63 1 -0.06384434040592217 0.018925394955935506 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 34851 9321 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42883496793 40.794 1 -0.06386090735959886 0.018925394955935506 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 118853 4597 VEEKPPPAP True H1975_Epitope_Rep2 962.5072969667398 962.50618993586 22.787 2 -0.06386869039118716 0.018925394955935506 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 57681 5073 LEMQRKGP True NCI_RA007_Epitope_Rep3 957.5065857740898 957.5054899358599 26.947 2 -0.06395893975227748 0.01894531646597762 0.9438714419765777 ['nc|ENSG823|P61582|ERVK-7_np9'] 116613 20656 TYGPSFPAF True PC9_epitope_Rep4 985.4545331178899 985.4539849679301 87.611 1 -0.06398781942382128 0.018964467005076143 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'RALGAPB|p.V262F|1|0.49|ENSG00000170471|chr20:38509120-38509120|G/T|missense_variant'] 68645 18093 LVAPPLPAA True PC9_epitope_Rep4 847.51673945163 847.51619496793 77.662 1 -0.0639999547616769 0.018964467005076143 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 71823 18382 MPAGSFITA True PC9_epitope_Rep5 893.43168949833 893.4311449679301 75.725 1 -0.06400299161560867 0.018964467005076143 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 6048 23197 APLVTLEVL True PC9_epitope_Rep3 953.57973363101 953.57918496793 94.496 1 -0.06403954075824395 0.01898284438128109 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 173 6264 AAEAVAAAV True NCI_RA007_Epitope_Rep4 771.4126683059098 771.41211496793 30.698 1 -0.06404147569925352 0.01898284438128109 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 47813 15360 IYSENSVSI True PC9_epitope_Rep1 1010.49204082542 1010.49147496793 63.899 1 -0.06409708428019958 0.01898284438128109 0.9438714419765777 ['ENST00000544520.5_1_15:72546082-72558314:-|nuORF', 'nc|ENSG00000137817|Q2NL67-3|PARP6', 'nc|ENSG00000137817|Q2NL67-2|PARP6', 'ENSG00000137817|ENST00000569795|PARP6'] 69692 14291 LVYEGQLSQA True PC9_epitope_Rep4 1106.56078909158 1106.5596899358602 62.87 2 -0.06411349247329166 0.01898284438128109 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 5154 17447 ALNSQAQVI True PC9_epitope_Rep5 942.5134449763399 942.51234993586 72.109 2 -0.06415443725056484 0.01898284438128109 0.9438714419765777 ['chr7:76490750-76492153|119|16.92|0.97|4.13|+|0|TE_info:AluJo,AluJo_dup29597,Alu,SINE,donor,-,76490617,76490750|None,DTX2|2'] 38109 7344 HEPEPHIL True PC9_epitope_Rep2 970.4872302285 970.48612993586 33.629 2 -0.06419298138558187 0.019002761084943965 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 102690 4648 SQDPGTHVV True PC9_epitope_Rep5 938.4457593393399 938.44521496793 22.935 1 -0.06424332330494714 0.019022676979921636 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 110001 7990 THTQPGVQL True PC9_epitope_Rep5 979.5086939490698 979.50758993586 35.672 2 -0.06429798445617499 0.01903756773761442 0.9438714419765777 ['nc|ENSG00000125354|Q14141-3|SEPTIN6', 'ENSG00000125354|ENST00000394610|SEPTIN6', 'nc|ENSG00000125354|Q14141-4|SEPTIN6', 'nc|ENSG00000125354|Q14141|SEPTIN6', 'SEPTIN6|p.Q82E|1|0.55|ENSG00000125354|chrX:119663579-119663579|G/C|missense_variant'] 14442 8613 DTNADKQLSF True NCI_RA007_Epitope_Rep3 1137.53021723929 1137.52912993586 40.956 2 -0.06435190179910752 0.01903756773761442 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 112625 16023 TPEDPFSSA True PC9_epitope_Rep5 949.4028914678499 949.40178993586 66.621 2 -0.06435482360002788 0.01903756773761442 0.9438714419765777 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'ENST00000557486.1_1_14:73748983-73753845:-|nuORF', 'ENST00000553997.5_1_14:73748216-73753941:-|nuORF'] 72028 18141 MQMSPALTC True PC9_epitope_Rep3 980.4129452830399 980.41239496793 74.98 1 -0.06439678116389304 0.01903756773761442 0.9438714419765777 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 101826 20642 SPILTSSTL True PC9_epitope_Rep5 917.5069626135701 917.50641496793 84.452 1 -0.06440589625536002 0.01903756773761442 0.9438714419765777 ['ENST00000544327.1_1_12:125284722-125292339:-|nuORF'] 39275 16949 HLPEELAEL True PC9_epitope_Rep6 1049.53932537101 1049.53822993586 77.738 2 -0.0644376218581878 0.01903756773761442 0.9438714419765777 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 25879 19672 FGIDLDTRV True PC9_epitope_Rep1 1034.53965972418 1034.53856993586 80.492 2 -0.06452487872394333 0.01903756773761442 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 60616 9870 LISQLVSS True H1975_Epitope_Rep1 845.48583324617 845.48528496793 42.898 1 -0.06452996961319633 0.01903756773761442 0.9438714419765777 ['ENST00000577035.5_1_17:7144758-7144931:-|nuORF'] 84026 18185 QENVDTILV True PC9_epitope_Rep6 1029.5342399905699 1029.5331499358601 82.589 2 -0.06453263202749797 0.01903756773761442 0.9438714419765777 ['ENSG00000089775|ENST00000608382|ZBTB25'] 129319 6307 VTDSIRDEY True H1975_Epitope_Rep2 1096.5036681382799 1096.50307496793 29.196 1 -0.06456276544689427 0.01903756773761442 0.9438714419765777 ['nc|ENSG00000087470|O00429-7|DNM1L', 'nc|ENSG00000087470|O00429-4|DNM1L', 'nc|ENSG00000087470|O00429-5|DNM1L', 'nc|ENSG00000087470|O00429-3|DNM1L', 'nc|ENSG00000087470|O00429-9|DNM1L', 'nc|ENSG00000087470|O00429-2|DNM1L', 'ENSG00000087470|ENST00000549701|DNM1L', 'nc|ENSG00000087470|O00429-8|DNM1L', 'nc|ENSG00000087470|O00429-6|DNM1L', 'DNM1L|p.G587Efs*12|1|0.19|ENSG00000087470|chr12:32740116-32740117|GC/-|frameshift_variant', 'ENST00000547548.1_1_12:32866256-32875568:+|nuORF'] 110461 15331 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.5336349679301 63.981 1 -0.06456681794704625 0.01903756773761442 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 71570 9095 MLDSHEELY True H1975_Epitope_Rep3 1135.48557554599 1135.48446993586 39.972 2 -0.06458831131700798 0.01903756773761442 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 21715 12388 ERYPYPVRL True PC9_epitope_Rep4 1191.6400424717897 1191.63838490379 55.456 3 -0.06459327860824678 0.01903756773761442 0.9438714419765777 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 76916 16840 NVLNDLAKV True PC9_epitope_Rep6 984.5603951687599 984.55928993586 77.289 2 -0.0646044929535545 0.01903756773761442 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 72395 8945 MTEKQLNLY True H1975_Epitope_Rep2 1138.5692456002998 1138.5681499358602 39.365 2 -0.06479180849719983 0.019051676912776188 0.9438714419765777 ['ENSG00000167985|ENST00000301761|SDHAF2', 'ENST00000536250.1_1_11:61204372-61205638:+|nuORF', 'ENSG00000256591|ENST00000541135|unknown'] 78419 6554 PAYHSSLMD True NCI_RA007_Epitope_Rep5 1019.43823143075 1019.43712993586 31.872 2 -0.0647923722512685 0.019051676912776188 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000548878.6_1_12:110874955-110888065:-|nuORF', 'ENST00000471641.1_1_12:110880867-110888065:-|nuORF', 'ARPC3|p.R25Qfs*16|1|0.26|ENSG00000111229|chr12:110445479-110445489|GACTTCTGATA/-|frameshift_variant', 'ENST00000543613.1_1_11:73633096-73633237:-|nuORF', 'ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 101835 19407 SPIPSIPEI True PC9_epitope_Rep6 951.52769805815 951.52660993586 87.305 2 -0.0648010091386303 0.019051676912776188 0.9438714419765777 ['ENSG00000166016|ENST00000435224|ABTB2', 'nc|ENSG00000166016|Q8N961-2|ABTB2'] 14190 10647 DSSVSEAISY True H1975_Epitope_Rep3 1056.46113461996 1056.46057496793 46.028 1 -0.0648102132428485 0.019051676912776188 0.9438714419765777 ['nc|ENSG00000198961|O43164-2|PJA2'] 135674 6138 YEGPPDDEA True H1975_Epitope_Rep3 991.3770706428298 991.37596993586 28.622 2 -0.06482262835223525 0.019051676912776188 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 105508 17611 SVDETLRLVQA True PC9_epitope_Rep1 1229.66156576201 1229.6604699358602 72.533 2 -0.06482836977759403 0.019051676912776188 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF', 'ENSG00000123131|ENST00000379341|PRDX4'] 98503 18695 SILETVTAV True PC9_epitope_Rep6 931.52261267771 931.52150993586 84.553 2 -0.06485943936178898 0.019051676912776188 0.9438714419765777 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 36651 21764 GVLPQLSMV True PC9_epitope_Rep3 942.5208388559 942.51974993586 89.013 2 -0.06488024747440027 0.019051676912776188 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 4007 12951 AHGVSLVL True PC9_epitope_Rep4 794.46503823194 794.46394993586 57.705 2 -0.06490397192613442 0.019051676912776188 0.9438714419765777 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 112914 11782 TPQPPLLKA True PC9_epitope_Rep5 963.5753169569099 963.57420993586 50.317 2 -0.0649475528253828 0.019051676912776188 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 5789 9595 APFAAHGYGA True PC9_epitope_Rep5 960.4453654165198 960.44426993586 41.869 2 -0.06500143932454971 0.019051676912776188 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 140108 22190 YVPPELITL True PC9_epitope_Rep3 1043.59029831471 1043.58920993586 90.64 2 -0.06500548948719856 0.019051676912776188 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 82501 9408 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43308993586 41.155 2 -0.0650322217554624 0.019051676912776188 0.9438714419765777 ['ENSG00000168143|ENST00000306858|FAM83B', 'FAM83B|p.M1000Ifs*12|1|0.2|ENSG00000168143|chr6:54941969-54941970|-/T|frameshift_variant', 'FAM83B|p.K141Rfs*2|1|0.3|ENSG00000168143|chr6:54870665-54870665|G/-|frameshift_variant'] 5790 7769 APFAAHGYGA True PC9_epitope_Rep6 960.4453654165198 960.44426993586 39.248 2 -0.06503405908639197 0.019051676912776188 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 132348 18517 VYLTDPQGL True PC9_epitope_Rep4 1004.5178616504397 1004.51676993586 79.299 2 -0.06503436463821399 0.019051676912776188 0.9438714419765777 ['ENSG00000157353|ENST00000288078|FCSK', 'nc|ENSG00000157353|Q8N0W3-2|FCSK', 'ENST00000464499.5_1_16:70501260-70504246:+|nuORF'] 24593 19632 FAMEIDPSL True PC9_epitope_Rep6 1021.4790336135699 1021.47792993586 88.174 2 -0.06504247554379589 0.019051676912776188 0.9438714419765777 ['ENSG00000198356|ENST00000357332|GET3', 'ENST00000590633.1_1_19:12848319-12856427:+|nuORF'] 140757 17281 YYQSSVQYL True PC9_epitope_Rep4 1149.5342399905699 1149.5331499358601 74.476 2 -0.06509927041909233 0.01907080543720836 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 130720 16483 VVDLLAPYAK True PC9_epitope_Rep6 1087.62774645259 1087.62664993586 75.827 2 -0.06510059318694482 0.01907080543720836 0.9438714419765777 ['ENSG00000110955|ENST00000262030|ATP5F1B', 'ENST00000547250.5_1_12:57033951-57037708:-|nuORF'] 61255 9881 LLDRLYEHY True H1975_Epitope_Rep2 1220.61897267404 1220.61733490379 42.995 3 -0.0651024729701199 0.01907080543720836 0.9438714419765777 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ'] 5787 9653 APFAAHGYGA True PC9_epitope_Rep3 960.4453654165198 960.44426993586 42.078 2 -0.0651944631336713 0.019090706214116168 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 46885 16526 IVIDPKNPL True PC9_epitope_Rep3 1007.60153170475 1007.60042993586 68.704 2 -0.06520286354318383 0.019110606183559198 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 20926 18544 EQVDKFFPL True PC9_epitope_Rep6 1121.5757108797297 1121.57460993586 83.97 2 -0.06524689233169012 0.01912856505334902 0.9438714419765777 ['ENSG00000132383|ENST00000254719|RPA1'] 118156 6394 VAVLGASR True PC9_epitope_Rep3 771.46028720467 771.45918993586 29.619 2 -0.06525172536112041 0.01912856505334902 0.9438714419765777 ['ENST00000534336.1_1_11:65265902-65266112:+|nuORF'] 127055 17887 VPYPPLLRA True PC9_epitope_Rep2 1024.6069514383598 1024.60584993586 74.105 2 -0.06526016172731322 0.01912856505334902 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 7068 7628 AQVRGGYVL True NCI_RA007_Epitope_Rep4 961.5345147740899 961.53340993586 35.994 2 -0.06527958790013659 0.01912856505334902 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 48773 8137 KEQLPPLAA True H1975_Epitope_Rep3 965.5545815123298 965.55348993586 36.276 2 -0.0652954280843805 0.01912856505334902 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 42004 15066 IEDPLIVTP True H1975_Epitope_Rep2 995.55391280599 995.5533649679301 63.102 1 -0.06530865761859908 0.01912856505334902 0.9438714419765777 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.P626Lfs*11|1|0.21|ENSG00000120539|chr10:27170834-27170834|C/-|frameshift_variant'] 2759 5853 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep2 863.3694835450299 863.36838993586 27.503 2 -0.06533264207112278 0.01916796819537129 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 64118 18428 LQEEPGQLL True PC9_epitope_Rep1 1025.53932537101 1025.53822993586 75.674 2 -0.06537829789109414 0.01916796819537129 0.9438714419765777 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF', 'ENST00000566424.1_1_16:29468907-29469081:+|nuORF', 'ENST00000395400.4_1_16:29468907-29472819:+|nuORF', 'nc|ENSG00000181625|Q9BQ83-2|SLX1A', 'ENST00000561824.5_1_16:30205929-30212162:+|nuORF', 'ENSG00000181625|ENST00000330181|SLX1B', 'ENSG00000132207|ENST00000251303|SLX1A'] 68817 7032 LVDSNNPKI True PC9_epitope_Rep2 998.53965972418 998.53856993586 32.45 2 -0.06543330068553554 0.01916796819537129 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 104663 10935 STAAKIMGV True PC9_epitope_Rep3 876.4738886634799 876.47278993586 47.045 2 -0.0654437158445835 0.01918241544326385 0.9438714419765777 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31'] 64598 12762 LREERAYIL True PC9_epitope_Rep3 1161.6506071554898 1161.64897490379 54.108 3 -0.06547620478212932 0.01918241544326385 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 27584 12480 FPRPVTVEP True PC9_epitope_Rep4 1040.5654805492 1040.5643899358602 55.811 2 -0.0654851488392891 0.01918241544326385 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 63480 8055 LPHGFTNM[Oxidation]A True PC9_epitope_Rep4 1002.4593016089401 1002.4582099358599 38.435 2 -0.06550249254712953 0.01918241544326385 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 123577 13741 VIISAPSADA True PC9_epitope_Rep2 942.5022115863 942.50110993586 58.143 2 -0.06555926875690327 0.01918241544326385 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000403475.2_1_6:84102419-84102602:+|nuORF', 'ENST00000511530.1_1_5:173940615-173940888:+|nuORF', 'ENST00000513369.2_1_16:28251621-28251681:-|nuORF', 'ENST00000466525.1_1_12:6646272-6646383:+|nuORF'] 37752 11968 HAVGDIPGV True PC9_epitope_Rep5 863.45011644379 863.4495649679301 51.031 1 -0.06558235621181929 0.01918241544326385 0.9438714419765777 ['ENST00000429775.2_1_X:70182861-70183140:+|nuORF', 'ENSG00000186468|ENST00000296674|RPS23'] 2758 5677 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep2 863.3694835450299 863.36838993586 26.835 2 -0.0655880639172545 0.01918241544326385 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 66984 21645 LTAEDLFEA True PC9_epitope_Rep1 1007.4811417885498 1007.48004993586 88.086 2 -0.06561277165611851 0.01918241544326385 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 25503 17129 FEQEIILVP True H1975_Epitope_Rep2 1086.5961119711399 1086.5950099358602 71.161 2 -0.06563582730347642 0.01918241544326385 0.9438714419765777 ['ENSG00000163904|ENST00000296257|SENP2', 'nc|ENSG00000163904|Q9HC62-2|SENP2'] 2246 12065 AENVPPVIP True H1975_Epitope_Rep2 934.5123823471799 934.5118349679301 51.49 1 -0.06567683912868849 0.01918241544326385 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 97642 7932 SHAQTVVL True PC9_epitope_Rep3 853.46576650793 853.46466993586 35.49 2 -0.06568702995684206 0.01918241544326385 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 109292 6937 TGEDSAFQEPD True H1975_Epitope_Rep2 1194.46767655238 1194.4665699358602 31.605 2 -0.06569038881979809 0.01918241544326385 0.9438714419765777 ['ENSG00000166483|ENST00000450114|WEE1'] 52260 6876 KNLQTVNVDEN True PC9_epitope_Rep5 1272.6309939097198 1272.62988993586 31.419 2 -0.06569104570403292 0.01918241544326385 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 106112 2610 SVNGKVLSK True NCI_RA007_Epitope_Rep5 930.5498304850599 930.54872993586 14.74 2 -0.06570262475592102 0.01918241544326385 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 65864 11133 LSKTSVVDL True PC9_epitope_Rep3 960.54916177872 960.54806993586 47.823 2 -0.06573116235240789 0.01918241544326385 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4'] 1676 8893 AEGMPPMQA True H1975_Epitope_Rep2 930.3939240906199 930.39282993586 39.178 2 -0.06576830300349361 0.019202303465336495 0.9438714419765777 ['ENSG00000170265|ENST00000610704|ZNF282', 'nc|ENSG00000170265|Q9UDV7-2|ZNF282'] 105809 23222 SVINFLDQL True PC9_epitope_Rep2 1047.5600608155898 1047.5594749679299 94.805 1 -0.0658031887434038 0.019221800928648187 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 44211 8175 ILSGVVTK True PC9_epitope_Rep1 815.51165407119 815.51054993586 36.277 2 -0.06580369293831813 0.019221800928648187 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 49028 9290 KFIDTTSKF True PC9_epitope_Rep4 1085.57571087973 1085.57460993586 43.34 2 -0.065913106540008 0.01924129681068916 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 2962 15766 AFIEKHWTF True PC9_epitope_Rep4 1177.59202965021 1177.59092993586 68.566 2 -0.06591502443118415 0.01924129681068916 0.9438714419765777 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 35370 16461 GTASGFYTV True PC9_epitope_Rep1 901.4181476091701 901.41704993586 68.142 2 -0.06607443339981219 0.019259619673194665 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 25615 7186 FETLQAQAGK True PC9_epitope_Rep2 1091.5611234447497 1091.56002993586 33.031 2 -0.06614768956317264 0.019259619673194665 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 135237 12927 YAYDGKDYLA True PC9_epitope_Rep2 1177.5291546101298 1177.52804993586 55.018 2 -0.066165441898595 0.019259619673194665 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 132856 14924 VYTRHMTWI True PC9_epitope_Rep5 1205.6015487880898 1205.59990490379 62.409 3 -0.06621090758929785 0.019259619673194665 0.9438714419765777 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000455605.2_1_6:43488011-43488227:+|nuORF', 'ENST00000481352.6_1_6:43488011-43488806:+|nuORF'] 109914 17597 THQPVFIQL True PC9_epitope_Rep4 1081.59202965021 1081.59092993586 75.701 2 -0.06622160727001289 0.019259619673194665 0.9438714419765777 ['ENSG00000123104|ENST00000381340|ITPR2'] 54122 14137 KYMPNVKVAVF True PC9_epitope_Rep6 1294.7107648838999 1294.7091149037901 66.248 3 -0.06623083054858304 0.01927637579811493 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 97568 10077 SGVSLAALK True PC9_epitope_Rep6 844.50181766348 844.50072993586 49.358 2 -0.06625289767442011 0.01927637579811493 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 4445 10959 AIYGTDDL True H1975_Epitope_Rep3 866.4021631918599 866.4016149679301 47.242 1 -0.06625673862874012 0.01927637579811493 0.9438714419765777 ['ENST00000508252.1_1_5:137463382-137465094:-|nuORF', 'ENSG00000112981|ENST00000265191|NME5'] 114076 10252 TRQTGIVL True PC9_epitope_Rep1 886.5236157372198 886.52250993586 44.317 2 -0.06626530288683963 0.01927637579811493 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000533421.2_1_11:65820160-65823021:+|nuORF', 'ENST00000531589.5_1_11:65819891-65822828:+|nuORF'] 76849 21355 NVIDNLIVA True PC9_epitope_Rep2 969.5494961318899 969.5489449679301 87.611 1 -0.0662662480752816 0.01927637579811493 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 45043 18151 IQNLVSASL True PC9_epitope_Rep1 943.53384606775 943.53274993586 74.608 2 -0.06632353708990146 0.01927637579811493 0.9438714419765777 ['nc|ENSG00000110330|Q13490-2|BIRC2', 'ENSG00000110330|ENST00000227758|BIRC2'] 68100 9314 LTPEEEEILNK True NCI_RA007_Epitope_Rep5 1313.6714617393698 1313.6703699358602 42.47 2 -0.06632725486121846 0.01927637579811493 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 38702 8320 HHSGNTYFL True PC9_epitope_Rep6 1074.48829285766 1074.4871899358602 41.632 2 -0.06635677188066512 0.01927637579811493 0.9438714419765777 ['nc|ENSG00000129691|Q9UBL3-2|ASH2L', 'nc|ENSG00000129691|Q9UBL3-3|ASH2L', 'ENSG00000129691|ENST00000343823|ASH2L'] 25254 8136 FEDESPPAP True H1975_Epitope_Rep1 987.4185415319898 987.4179949679301 36.234 1 -0.06638774482751462 0.01927637579811493 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D'] 5219 4394 ALQASALK True NCI_RA007_Epitope_Rep5 800.47560291564 800.4745099358599 23.53 2 -0.0664530693914862 0.019315348912624902 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 14929 24131 DYLEWPEYF True PC9_epitope_Rep5 1260.5339056373998 1260.53280993586 97.806 2 -0.06646737053885439 0.019315348912624902 0.9438714419765777 ['ENSG00000129187|ENST00000438320|DCTD', 'nc|ENSG00000129187|P32321-2|DCTD'] 17767 13790 EHVEAIKIGL True PC9_epitope_Rep2 1107.6288090817498 1107.6277099358601 58.328 2 -0.06647980494943193 0.019315348912624902 0.9438714419765777 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ENSG00000122952|ENST00000373944|ZWINT'] 38481 14266 HHALPITDL True PC9_epitope_Rep5 1015.54507945779 1015.5439899358599 59.878 2 -0.06648177829704731 0.019315348912624902 0.9438714419765777 ['ENSG00000065268|ENST00000585809|WDR18'] 104973 22429 STIANVWLV True PC9_epitope_Rep3 1001.55458151233 1001.55348993586 91.55 2 -0.0665442492540228 0.01933404940923738 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 140230 18757 YWMHVQNTF True PC9_epitope_Rep2 1224.53861417836 1224.53750993586 77.524 2 -0.06654585938836081 0.01933404940923738 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 25109 14466 FDLGGGTFD True H1975_Epitope_Rep3 927.39741216459 927.39686496793 61.002 1 -0.0665474413517696 0.01933404940923738 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000442006.2_1_1:39174637-39175513:+|nuORF'] 112201 16826 TLVYHVVGV True PC9_epitope_Rep3 985.5596668927699 985.55856993586 69.872 2 -0.06654816440946987 0.01933404940923738 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-2|SF3B3'] 90200 16031 RHIEIFTDL True PC9_epitope_Rep4 1142.6084079903399 1142.6067749037902 69.595 3 -0.06659379540228598 0.019351962552432673 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 9602 13225 AYEHKFYEI True PC9_epitope_Rep5 1198.5658744720197 1198.56476993586 55.878 2 -0.06663285540373547 0.019351962552432673 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 17816 8452 EIAAEYGIK True NCI_RA007_Epitope_Rep2 992.5178616504398 992.51676993586 37.519 2 -0.06663912938117314 0.019351962552432673 0.9438714419765777 ['ENSG00000169989|ENST00000304337|TIGD4'] 41911 12457 IEAELEKVA True PC9_epitope_Rep2 1000.5440763982799 1000.54296993586 53.224 2 -0.06666156253523398 0.019351962552432673 0.9438714419765777 ['ENSG00000100604|ENST00000216492|CHGA'] 27587 11845 FPRPVTVEP True PC9_epitope_Rep6 1040.5654805492 1040.5643899358602 56.767 2 -0.06666721249612637 0.019351962552432673 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 7125 8321 AQYEEMAKC True PC9_epitope_Rep1 1071.4365171785898 1071.4354099358602 36.84 2 -0.06668987143401944 0.019351962552432673 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 31580 9921 GEFSITYKP True NCI_RA007_Epitope_Rep3 1040.5178616504397 1040.51727496793 46.108 1 -0.06672080275843865 0.019371833839918945 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF', 'ENST00000586096.3_1_19:1440314-1440458:+|nuORF'] 109833 17291 THLGPLASL True PC9_epitope_Rep5 907.51271670035 907.51160993586 71.515 2 -0.06676200412599627 0.019390918485198468 0.9438714419765777 ['ENSG00000127399|ENST00000359623|LRRC61'] 139225 6767 YSYPTGNHTY True H1975_Epitope_Rep2 1201.50400249145 1201.50290993586 30.945 2 -0.06676808367851877 0.019390918485198468 0.9438714419765777 ['nc|ENSG00000089159|P49023-2|PXN', 'nc|ENSG00000089159|P49023|PXN', 'nc|ENSG00000089159|P49023-3|PXN', 'ENSG00000089159|ENST00000637617|PXN'] 29141 8048 FTTREGLY True H1975_Epitope_Rep3 985.4868958753298 985.48578993586 35.93 2 -0.06677631395646715 0.019390918485198468 0.9438714419765777 ['WDR20|p.N46Tfs*5|1|0.39|ENSG00000140153|chr14:102140060-102140069|ACCCTGTCCG/-|frameshift_variant', 'nc|ENSG00000140153|Q8TBZ3-8|WDR20', 'ENST00000561154.1_1_14:102606260-102633856:+|nuORF', 'nc|ENSG00000140153|Q8TBZ3-3|WDR20', 'nc|ENSG00000140153|Q8TBZ3-4|WDR20', 'nc|ENSG00000140153|Q8TBZ3-5|WDR20', 'nc|ENSG00000140153|Q8TBZ3-6|WDR20', 'ENSG00000140153|ENST00000342702|WDR20', 'nc|ENSG00000140153|Q8TBZ3-2|WDR20', 'nc|ENSG00000140153|Q8TBZ3-7|WDR20'] 57019 12867 LEEELKTFKRI True H1975_Epitope_Rep3 1404.7976653119997 1404.7965699358601 54.715 2 -0.0667947148296143 0.019409607553133295 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 8960 16170 AVGVLVAAT True PC9_epitope_Rep2 799.48035394291 799.47980496793 67.451 1 -0.06680471267176627 0.019409607553133295 0.9438714419765777 ['FCN2|p.G11V|1|0.18|ENSG00000160339|chr9:134880853-134880853|G/T|missense_variant'] 114978 7046 TTISKVSQV True PC9_epitope_Rep3 961.5444107514498 961.54330993586 32.112 2 -0.06682885996017529 0.019409607553133295 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 107235 10561 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59198993586 45.514 2 -0.0668865391878556 0.019409607553133295 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 6414 8502 APSGGRLLSA True PC9_epitope_Rep5 927.5137793295099 927.51268993586 37.645 2 -0.06697245347739655 0.01942868719611021 0.9438714419765777 ['nc|ENSG00000094914|Q9NRG9-2|AAAS', 'ENSG00000094914|ENST00000209873|AAAS', 'ENST00000546572.1_1_12:53702939-53703546:-|nuORF', 'ENST00000550033.5_1_12:53701834-53703447:-|nuORF'] 89326 8981 RELVKNWVP True NCI_RA007_Epitope_Rep4 1139.64512785223 1139.64349490379 41.381 3 -0.06697533700883271 0.01942868719611021 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 29878 15978 FVYENPISL True H1975_Epitope_Rep1 1080.54916177872 1080.5485749679299 66.784 1 -0.0669782273860836 0.01942868719611021 0.9438714419765777 ['ENSG00000005486|ENST00000006777|RHBDD2', 'nc|ENSG00000005486|Q6NTF9-2|RHBDD2'] 49442 4058 KIPREDRQQFK True NCI_RA007_Epitope_Rep4 1443.7946456202296 1443.79300490379 21.877 3 -0.06703929403674887 0.019446976602856273 0.9438714419765777 ['nc|ENSG00000135424|Q13683-9|ITGA7', 'ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7'] 94551 10640 RYIPTAAAF True NCI_RA007_Epitope_Rep2 1008.5392658013599 1008.5386749679301 45.987 1 -0.06708479296682511 0.019446976602856273 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 67937 12325 LTLHNLEK True PC9_epitope_Rep3 966.5498304850599 966.54872993586 52.435 2 -0.06711145514282398 0.019446976602856273 0.9438714419765777 ['ENSG00000139719|ENST00000267199|VPS33A'] 105789 18339 SVIGSLNGV True PC9_epitope_Rep5 844.46543215476 844.4648849679301 75.556 1 -0.06715332940714934 0.019446976602856273 0.9438714419765777 ['ENST00000531017.5_1_19:50314409-50316363:-|nuORF', 'nc|ENSG00000010361|Q9BT04-3|FUZ', 'nc|ENSG00000010361|Q9BT04-2|FUZ', 'ENSG00000010361|ENST00000313777|FUZ'] 92118 8456 RPYQPLPEA True PC9_epitope_Rep6 1069.55564414149 1069.5545499358602 42.225 2 -0.06717955925611409 0.019446976602856273 0.9438714419765777 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'NRBF2-REEP3|1|fusion'] 2899 8006 AFAAGADIK True PC9_epitope_Rep1 862.45486747106 862.45376993586 35.616 2 -0.06718665438861648 0.019465656586116795 0.9438714419765777 ['ENSG00000127884|ENST00000368547|ECHS1'] 97939 13299 SHQKETWIL True PC9_epitope_Rep1 1140.5927579262 1140.59110490379 56.018 3 -0.06718721266562554 0.019465656586116795 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 85311 13642 QLAESVANV True PC9_epitope_Rep5 929.4818104948899 929.48070993586 57.497 2 -0.06719218499009015 0.019465656586116795 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 47730 7788 IYQKAFEHL True NCI_RA007_Epitope_Rep4 1147.6025943339098 1147.60093490379 36.638 3 -0.06720793364899814 0.019465656586116795 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 84053 8938 QEQDSRLWSP True H1975_Epitope_Rep1 1244.5785644140399 1244.57797496793 39.285 1 -0.0672556211965889 0.019485517520761594 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 34895 7980 GQVPPGESV True PC9_epitope_Rep5 868.42904664604 868.4279499358599 35.634 2 -0.06726297178361156 0.019504587527596054 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 105763 19000 SVIDIINGEA True PC9_epitope_Rep6 1029.5342399905699 1029.5331499358601 85.727 2 -0.06726652033058493 0.019504587527596054 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant'] 30099 19308 FYPPHPDYTW True PC9_epitope_Rep2 1321.5767735088898 1321.57566993586 79.643 2 -0.06728209922615665 0.019504587527596054 0.9438714419765777 ['ENSG00000130309|ENST00000252599|COLGALT1'] 104158 12377 SSAPGLTSV True PC9_epitope_Rep5 817.4181476091701 817.41704993586 52.604 2 -0.06729954712107002 0.019515750263179206 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1'] 75269 13702 NPNQYNYIA True PC9_epitope_Rep5 1095.49852318819 1095.4979749679298 57.732 1 -0.06731663515524551 0.019515750263179206 0.9438714419765777 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 77425 16386 NYNDFGNY True PC9_epitope_Rep1 1005.3828247296099 1005.38172993586 67.852 2 -0.06736114857179483 0.019515750263179206 0.9438714419765777 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 40928 19476 HVVGLLTTL True PC9_epitope_Rep2 951.5753169569101 951.57420993586 80.294 2 -0.06738071999705884 0.019515750263179206 0.9438714419765777 ['ENSG00000149932|ENST00000279396|TMEM219'] 60788 7912 LKGEATVSFDD True NCI_RA007_Epitope_Rep4 1180.5611830144 1180.56008993586 37.173 2 -0.06740783318204613 0.019515750263179206 0.9438714419765777 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 140578 21984 YYLSLPPEM True PC9_epitope_Rep1 1111.5259838059899 1111.52488993586 89.383 2 -0.0674814092731991 0.019515750263179206 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ASNS|p.S427F|1|0.32|ENSG00000070669|chr7:97853345-97853345|G/A|missense_variant'] 95286 6771 SADYIGGSHY True H1975_Epitope_Rep2 1068.4512386426 1068.45014993586 30.96 2 -0.0674833911648459 0.019515750263179206 0.9438714419765777 ['ENSG00000120837|ENST00000240055|NFYB'] 126741 10343 VPSDETLLG True H1975_Epitope_Rep2 929.4705771048499 929.46948993586 44.792 2 -0.06750811331187105 0.019515750263179206 0.9438714419765777 ['ENSG00000171872|ENST00000372299|KLF17', 'KLF17|p.P194Rfs*40|1|0.24|ENSG00000171872|chr1:44129850-44129850|C/-|frameshift_variant'] 83554 15950 QDQIVSLGATV True PC9_epitope_Rep1 1129.59790287629 1129.5968099358602 66.161 2 -0.06756519949577977 0.019515750263179206 0.9438714419765777 ['ENST00000525625.1_1_11:125884983-125893371:-|nuORF', 'ENSG00000064309|ENST00000531738|CDON', 'nc|ENSG00000064309|Q4KMG0|CDON'] 30095 23809 FYPAIADLF True PC9_epitope_Rep5 1055.5327834385898 1055.5316899358602 96.562 2 -0.06758580233404629 0.019515750263179206 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 80176 16209 PLAAIAPS True PC9_epitope_Rep2 738.4275900940601 738.4270449679301 67.595 1 -0.06759086475087409 0.019515750263179206 0.9438714419765777 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF'] 44758 10348 IPSGTILKA True PC9_epitope_Rep4 898.5487678558999 898.54766993586 47.499 2 -0.06761764448821761 0.019515750263179206 0.9438714419765777 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'ACAD10|p.L79F|1|0.23|ENSG00000111271|chr12:111702211-111702211|G/T|missense_variant', 'ENST00000509936.5_1_12:112130513-112147506:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-4|ACAD10', 'ENST00000507135.5_1_12:112130513-112159479:+|nuORF'] 60706 9025 LIYNEALKG True NCI_RA007_Epitope_Rep1 1019.5651461960299 1019.56404993586 39.109 2 -0.06762832816036292 0.019515750263179206 0.9438714419765777 ['ENSG00000197956|ENST00000368719|S100A6'] 101899 9246 SPLLEACEFLR True NCI_RA007_Epitope_Rep1 1276.64855855016 1276.64746993586 39.964 2 -0.06764476909379058 0.019515750263179206 0.9438714419765777 ['nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 102306 6372 SPVFRTGSE True PC9_epitope_Rep4 978.4770594676199 978.47596993586 31.594 2 -0.06764779398546641 0.019515750263179206 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 69288 10381 LVPEQIGK True PC9_epitope_Rep2 882.5174677276199 882.51636993586 45.254 2 -0.06770445454155521 0.019515750263179206 0.9438714419765777 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1', 'ENST00000570977.1_1_17:52992089-53007568:+|nuORF', 'nc|ENSG00000141198|O75674-2|TOM1L1'] 77364 20760 NYLPFIMEL True NCI_RA007_Epitope_Rep3 1138.57326835158 1138.57216993586 90.415 2 -0.06775439771308739 0.019515750263179206 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 31811 9876 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43098993586 42.976 2 -0.06776871683081434 0.019515750263179206 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 126451 14145 VPLRFPAGSAA True PC9_epitope_Rep5 1084.6029286870798 1084.60182993586 59.419 2 -0.06777824658876715 0.019515750263179206 0.9438714419765777 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 95225 7632 SAASASAAL True PC9_epitope_Rep5 747.37628279719 747.37573496793 34.303 1 -0.06779986741481542 0.019515750263179206 0.9438714419765777 ['ENSG00000124766|ENST00000244745|SOX4'] 67255 12927 LTDLVPNTEY True H1975_Epitope_Rep3 1163.57101942211 1163.56992993586 54.952 2 -0.06781749144145136 0.019515750263179206 0.9438714419765777 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1', 'ENST00000474564.1_1_6:75852961-75855988:-|nuORF'] 37089 6837 GVSKPLPSVP True NCI_RA007_Epitope_Rep4 979.57023157647 979.56912993586 32.919 2 -0.06783501274686479 0.019515750263179206 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 119902 13699 VEWDYKLVP True NCI_RA007_Epitope_Rep3 1147.5913609438699 1147.59026993586 61.199 2 -0.06784030944447535 0.019515750263179206 0.9438714419765777 ['ENSG00000162654|ENST00000355754|GBP4'] 72069 15186 MRCALALSA True PC9_epitope_Rep5 934.4728431176599 934.47174993586 63.42 2 -0.0678757241969079 0.01952887845549844 0.9438714419765777 ['ENSG00000128567|ENST00000378555|PODXL', 'nc|ENSG00000128567|O00592-2|PODXL'] 25259 8279 FEDESPPAP True H1975_Epitope_Rep3 987.4185415319898 987.4179949679301 36.828 1 -0.06792131407609212 0.01952887845549844 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D'] 39732 12474 HPWETVTTAA True PC9_epitope_Rep3 1111.52982331647 1111.5287299358602 53.007 2 -0.06792471963523139 0.01952887845549844 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 1223 15097 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.4488949679301 63.224 1 -0.06795684548720433 0.01952887845549844 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 76756 22030 NTVDFFNQI True PC9_epitope_Rep1 1096.5189242796 1096.5178299358602 89.553 2 -0.06797122385825687 0.01952887845549844 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A', 'nc|ENSG00000114978|Q9H8S9-2|MOB1A', 'ENST00000463975.1_1_2:74392309-74405801:-|nuORF', 'MOB1A|p.A148Qfs*5|1|0.11|ENSG00000114978|chr2:74159222-74159222|C/-|frameshift_variant', 'ENST00000509041.5_1_4:71768157-71841035:+|nuORF', 'ENST00000511449.1_1_4:71768157-71863814:+|nuORF', 'ENSG00000173542|ENST00000309395|MOB1B', 'nc|ENSG00000173542|Q7L9L4-2|MOB1B'] 92635 11679 RRFKWAIEL True NCI_RA007_Epitope_Rep4 1217.7033114346898 1217.70166490379 51.883 3 -0.06797467855160816 0.01952887845549844 0.9438714419765777 ['nc|ENSG00000128463|Q5J8M3-3|EMC4', 'ENST00000557941.1_1_15:34517315-34518058:+|nuORF', 'nc|ENSG00000128463|Q5J8M3-2|EMC4', 'ENSG00000128463|ENST00000267750|EMC4'] 92287 14250 RQLESLIRL True PC9_epitope_Rep6 1126.6822416369398 1126.68058490379 66.703 3 -0.06798720893048756 0.01952887845549844 0.9438714419765777 ['ENSG00000104738|ENST00000649973|MCM4', 'nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 44813 3560 IPVIREED True PC9_epitope_Rep4 969.51311062317 969.51200993586 19.789 2 -0.06800788464265754 0.01952887845549844 0.9438714419765777 ['ENSG00000141639|ENST00000400384|MAPK4'] 9599 13257 AYEHKFYEI True PC9_epitope_Rep1 1198.5658744720197 1198.56421490379 55.859 3 -0.06802422527817 0.01952887845549844 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 14721 3611 DVRQTLVGT True NCI_RA007_Epitope_Rep4 987.5349086969098 987.53380993586 19.948 2 -0.0680347021720517 0.01952887845549844 0.9438714419765777 ['ENST00000483350.1_1_3:50085717-50095163:+|nuORF'] 2754 5739 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 27.144 2 -0.06805669859743592 0.01952887845549844 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 86661 12624 QRGPPIIL True PC9_epitope_Rep6 892.5494365622399 892.54832993586 60.02 2 -0.06806987369242677 0.01952887845549844 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 681 6180 AAVDAGM[Oxidation]AM True NCI_RA007_Epitope_Rep4 851.35172530591 851.35062993586 30.381 2 -0.06807196847030221 0.01952887845549844 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 22235 7317 ETDLRNHFY True H1975_Epitope_Rep2 1193.5465360097699 1193.54488490379 33.085 3 -0.06809074118966428 0.01952887845549844 0.9438714419765777 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22'] 1016 8390 AEAEPPSEVV True H1975_Epitope_Rep2 1026.48695544498 1026.48637496793 37.225 1 -0.06810518396954686 0.01952887845549844 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 76937 16398 NVPDSFNEV True PC9_epitope_Rep2 1019.45598966987 1019.45488993586 68.319 2 -0.06811464355141367 0.01952887845549844 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 129171 11660 VTDELPLP True H1975_Epitope_Rep2 882.4698488288599 882.46930496793 49.922 1 -0.06813323412095594 0.01952887845549844 0.9438714419765777 ['ENSG00000018408|ENST00000360632|WWTR1'] 53764 10289 KYFDEHYEY True PC9_epitope_Rep6 1292.53496826656 1292.5338699358601 50.265 2 -0.06817885226965245 0.01952887845549844 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 137856 11908 YPIEHGIITN True PC9_epitope_Rep5 1155.5924235730297 1155.5913299358601 50.802 2 -0.06831159340902315 0.019605859501456782 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 136332 18456 YHADPSLVSF True PC9_epitope_Rep3 1134.53457434374 1134.53346993586 76.195 2 -0.06832948074570615 0.019605859501456782 0.9438714419765777 ['nc|ENSG00000078900|O15350-11|TP73', 'nc|ENSG00000078900|O15350-8|TP73', 'ENSG00000078900|ENST00000378295|TP73'] 6840 17636 AQIEAKFYEEV True PC9_epitope_Rep5 1325.6503323719699 1325.6492299358601 72.849 2 -0.06833471896158246 0.019605859501456782 0.9438714419765777 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 44709 13422 IPPHGIDSAI True PC9_epitope_Rep1 1018.54474510462 1018.54364993586 56.489 2 -0.06834030549559098 0.019605859501456782 0.9438714419765777 ['MMP16|p.T451Pfs*16|1|0.21|ENSG00000156103|chr8:88056154-88056154|C/-|frameshift_variant', 'ENSG00000156103|ENST00000286614|MMP16'] 43243 11513 IHDFQPHVI True PC9_epitope_Rep2 1104.5716285588 1104.5705299358601 49.609 2 -0.06836825816972128 0.019605859501456782 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 80881 19805 PLWGGVLI True H1975_Epitope_Rep1 853.5061747679299 853.50506993586 82.42 2 -0.06839051591477102 0.019605859501456782 0.9438714419765777 ['nc|ENSG00000018280|P49279-2|SLC11A1', 'ENSG00000018280|ENST00000233202|SLC11A1', 'SLC11A1|p.F199Wfs*14|1|0.16|ENSG00000018280|chr2:218387584-218387585|TT/-|frameshift_variant', 'ENST00000494322.5_1_2:219247091-219256951:+|nuORF', 'nc|ENSG00000110911|P49281-5|SLC11A2', 'ENSG00000110911|ENST00000262052|SLC11A2', 'nc|ENSG00000110911|P49281|SLC11A2', 'nc|ENSG00000110911|P49281-3|SLC11A2', 'nc|ENSG00000110911|P49281-4|SLC11A2'] 118510 13374 VDSQILYY True H1975_Epitope_Rep3 999.49131254943 999.49020993586 56.706 2 -0.06843518971024812 0.019605859501456782 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 95569 5333 SASGPLHSV True PC9_epitope_Rep2 853.4293809992101 853.42828993586 25.902 2 -0.06843830335765186 0.019605859501456782 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 95436 12266 SALGYLHSL True NCI_RA007_Epitope_Rep4 959.5076313199099 959.50652993586 54.177 2 -0.06844266786388084 0.019605859501456782 0.9438714419765777 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000477460.6_1_6:134491408-134493948:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF', 'ENST00000474427.6_1_6:134493798-134493948:-|nuORF'] 62229 20533 LLPVRLPLA True PC9_epitope_Rep5 990.6589870112199 990.65788993586 84.022 2 -0.06844981983197122 0.019605859501456782 0.9438714419765777 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 21035 12101 ERDAYVQAL True PC9_epitope_Rep3 1063.52982331647 1063.5287299358602 51.588 2 -0.06855998834307121 0.019664569382346397 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ENSG00000124198|ENST00000371917|ARFGEF2'] 82412 16506 PVAPAVPTV True PC9_epitope_Rep1 849.49600400705 849.49490993586 68.314 2 -0.06857086778985756 0.019664569382346397 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 85116 17877 QISDTSVVL True PC9_epitope_Rep5 960.51277627 960.51222496793 73.782 1 -0.06858133101489033 0.019664569382346397 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 35851 17601 GVAANDVIVHI True PC9_epitope_Rep1 1106.6084079903399 1106.60730993586 72.494 2 -0.06865495301942828 0.019664569382346397 0.9438714419765777 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF'] 107493 9936 TAAHGLEL True PC9_epitope_Rep5 810.42356734278 810.42246993586 43.192 2 -0.06869915319595317 0.019664569382346397 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 131814 18862 VYAPPVGGF True PC9_epitope_Rep4 905.4647038787698 905.4641549679301 80.64 1 -0.06873755700257933 0.019703835572099045 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 44947 20691 IQFIMCPQL True PC9_epitope_Rep3 1091.5507590851898 1091.54966993586 84.862 2 -0.06875127808655715 0.019703835572099045 0.9438714419765777 ['NBAS|p.T2353Lfs*?|1|0.21|ENSG00000151779|chr2:15167108-15167108|C/-|frameshift_variant'] 46975 2828 IVNTNVPR True NCI_RA007_Epitope_Rep1 911.51886470995 911.51776993586 14.826 2 -0.0688196748508472 0.019703835572099045 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 101751 6924 SPHLGPAPA True PC9_epitope_Rep5 845.4395517600899 845.43844993586 31.603 2 -0.06888020683488438 0.019743096996055427 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant', 'IGF2R-SYTL3|1|fusion', 'IGF2R-SYTL3|2|fusion'] 20632 15906 EQFHQFLEA True PC9_epitope_Rep2 1147.52982331647 1147.5287299358602 66.435 2 -0.06890852067426963 0.019743096996055427 0.9438714419765777 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF'] 113885 10870 TRHPENWTL True PC9_epitope_Rep3 1152.56760580752 1152.56596490379 46.789 3 -0.06891221954328441 0.019743096996055427 0.9438714419765777 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136', 'nc|nan|Q5SQH8-2|C6orf136', 'ENST00000487873.1_1_6:30618866-30620506:+|nuORF', 'ENST00000488383.5_1_6:30618866-30620689:+|nuORF'] 67000 15949 LTAGDYIYI True H1975_Epitope_Rep2 1027.52261267771 1027.52207496793 66.546 1 -0.06899101945150617 0.019782353655083136 0.9438714419765777 ['ENSG00000275793|ENST00000619918|RIMBP3', 'ENSG00000274600|ENST00000620804|RIMBP3B', 'ENSG00000183246|ENST00000433039|RIMBP3C'] 80178 16424 PLAAIAPS True PC9_epitope_Rep5 738.4275900940601 738.4270449679301 68.175 1 -0.06902755758976492 0.019782353655083136 0.9438714419765777 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF'] 65123 8073 LSDPQVHTV True PC9_epitope_Rep3 994.5083595959 994.50726993586 36.028 2 -0.06904207131727724 0.019782353655083136 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 77657 4987 PAAAAAAAAA True PC9_epitope_Rep3 754.3973525949399 754.3962499358599 24.274 2 -0.06906770857485951 0.01980177993527508 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000257359.6_1_11:130297588-130298293:-|nuORF', 'ENST00000370272.8_1_1:93811487-93811679:+|nuORF', 'ENST00000280665.10_1_12:2062308-2062389:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ZIC2|p.S454T|1|0.33|ENSG00000043355|chr13:99985443-99985443|T/A|missense_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 62872 16260 LMQLLQESL True NCI_RA007_Epitope_Rep3 1073.5790820080101 1073.5779899358602 71.645 2 -0.06911647043385 0.01980177993527508 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 35376 15266 GTASGFYTV True PC9_epitope_Rep4 901.4181476091701 901.41704993586 66.651 2 -0.06917632432331264 0.019820402880025886 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 111792 4225 TLQYREDP True NCI_RA007_Epitope_Rep3 1020.4876241513199 1020.48652993586 23.287 2 -0.06919240408841537 0.019820402880025886 0.9438714419765777 ['ENSG00000136040|ENST00000258526|PLXNC1'] 74037 6962 NHSEGSTTLL True PC9_epitope_Rep4 1057.5040024914501 1057.50290993586 34.017 2 -0.06919316503348143 0.019820402880025886 0.9438714419765777 ['ENSG00000026508|ENST00000428726|CD44', 'nc|ENSG00000026508|P16070-9|CD44', 'nc|ENSG00000026508|P16070-5|CD44', 'nc|ENSG00000026508|P16070-7|CD44', 'nc|ENSG00000026508|P16070-3|CD44', 'nc|ENSG00000026508|P16070-6|CD44', 'nc|ENSG00000026508|P16070-16|CD44', 'nc|ENSG00000026508|P16070-17|CD44', 'nc|ENSG00000026508|P16070-4|CD44', 'nc|ENSG00000026508|P16070-10|CD44', 'nc|ENSG00000026508|P16070-11|CD44'] 108665 7516 TELESTVSA True H1975_Epitope_Rep2 935.4447562798299 935.4442049679301 33.861 1 -0.06920263736947925 0.019820402880025886 0.9438714419765777 ['SOS2|p.P1259*|1|0.09|ENSG00000100485|chr14:50118556-50118569|GAGGAGTGCTTGGC/-|frameshift_variant', 'ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 69942 19668 LYEAPVSYTF True NCI_RA007_Epitope_Rep4 1188.5702911461196 1188.56918993586 84.999 2 -0.06927560430944933 0.019839424029769247 0.9438714419765777 ['ENSG00000128849|ENST00000281282|CGNL1', 'nc|ENSG00000128849|Q0VF96-2|CGNL1'] 35409 18270 GTDGFVINL True PC9_epitope_Rep1 934.47599683846 934.47544496793 75.065 1 -0.06927912909203035 0.019839424029769247 0.9438714419765777 ['ENSG00000100079|ENST00000215886|LGALS2'] 61599 16247 LLGPTVML True H1975_Epitope_Rep3 842.4935614789 842.4930149679301 67.95 1 -0.06928168626965861 0.019839424029769247 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF', 'ENST00000536689.5_1_19:10664629-10668377:-|nuORF'] 20211 13441 ENTLQLVRNI True NCI_RA007_Epitope_Rep1 1198.6669854956199 1198.6658899358602 56.286 2 -0.06934840772347278 0.019878263331378536 0.9438714419765777 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 108603 8820 TEILKSVVA True H1975_Epitope_Rep2 958.5698972232999 958.56880993586 38.893 2 -0.06936846149677095 0.019878263331378536 0.9438714419765777 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1'] 17981 13814 EIGPFQLEP True H1975_Epitope_Rep2 1028.5178616504397 1028.51676993586 58.282 2 -0.06937004695003078 0.019878263331378536 0.9438714419765777 ['ENSG00000131381|ENST00000253699|RBSN'] 10938 3596 DAVTYTEHAK True NCI_RA007_Epitope_Rep5 1133.53530261973 1133.53366490379 19.773 3 -0.06937493031853001 0.019878263331378536 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 89470 4639 REQFSRAPVSA True H1975_Epitope_Rep3 1246.64183337694 1246.64017490379 22.965 3 -0.06945822215691302 0.019896875947831363 0.9438714419765777 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 83249 6383 QADNPHVAL True NCI_RA007_Epitope_Rep4 963.47739382079 963.47628993586 31.156 2 -0.06946188478296285 0.019896875947831363 0.9438714419765777 ['HYOU1|p.E939Gfs*11|1|0.39|ENSG00000149428|chr11:119046582-119046583|-/C|frameshift_variant', 'HYOU1|p.L930Sfs*31|1|0.14|ENSG00000149428|chr11:119046610-119046610|G/-|frameshift_variant', 'ENSG00000149428|ENST00000617285|HYOU1', 'nc|ENSG00000149428|Q9Y4L1-2|HYOU1', 'ENST00000543287.5_1_11:118919950-118926831:-|nuORF', 'HYOU1-FOSL2|1|fusion', 'ENST00000531694.5_1_11:118924831-118926006:-|nuORF', 'ENST00000533381.5_1_11:118925895-118927580:-|nuORF'] 1199 8728 AEDEAAALP True H1975_Epitope_Rep2 885.4079768482899 885.40686993586 38.533 2 -0.069487689090413 0.019896875947831363 0.9438714419765777 ['ENST00000503791.5_1_13:28712738-28712795:+|nuORF'] 5786 8605 APFAAHGYGA True PC9_epitope_Rep2 960.4453654165198 960.44426993586 38.459 2 -0.06958025474367126 0.019896875947831363 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 118646 9036 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48528496793 39.71 1 -0.06960857712834702 0.019916290919384516 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 87779 2711 QVHPDTGISSK True NCI_RA007_Epitope_Rep2 1167.5884008217502 1167.58675490379 14.773 3 -0.0696493493842438 0.019916290919384516 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26', 'ENSG00000146047|ENST00000274764|H2BC1'] 6980 6260 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep2 935.4348606187698 935.43376993586 28.955 2 -0.06969784135583233 0.01993489820262429 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 115157 7095 TVAEKVDAV True PC9_epitope_Rep1 930.5022115862998 930.50110993586 32.1 2 -0.0697463080321733 0.01993489820262429 0.9438714419765777 ['ENST00000453705.1_3_X:154299864-154348422:+|nuORF', 'ENSG00000185515|ENST00000330045|BRCC3', 'nc|ENSG00000185515|P46736-3|BRCC3', 'nc|ENSG00000185515|P46736|BRCC3', 'nc|ENSG00000185515|P46736-5|BRCC3'] 2889 10927 AEYSNTWTP True H1975_Epitope_Rep2 1067.45598966987 1067.4554749679298 47.064 1 -0.06980010201162327 0.01993489820262429 0.9438714419765777 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 132207 7592 VYKDHQTITI True PC9_epitope_Rep4 1216.6451874218799 1216.6440899358602 36.584 2 -0.06981532663159722 0.01993489820262429 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 83299 13471 QAIEKLEEI True PC9_epitope_Rep6 1071.58119018299 1071.58008993586 63.511 2 -0.06983764602544795 0.019952695736551642 0.9438714419765777 ['ENSG00000230453|ENST00000684830|ANKRD18B', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENST00000354752.5_1_9:99922575-99942308:-|nuORF'] 139500 13297 YTIDTENSTV True PC9_epitope_Rep2 1141.51389846881 1141.51280993586 56.424 2 -0.06984095749005016 0.019952695736551642 0.9438714419765777 ['LSM14A-GPI|1|fusion', 'nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A', 'LSM14A-GPI|2|fusion'] 135042 14584 YAISKPEVL True PC9_epitope_Rep5 1018.5698972232999 1018.56880993586 61.098 2 -0.06986171197019629 0.019952695736551642 0.9438714419765777 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746'] 129492 21218 VTEVELLLY True H1975_Epitope_Rep3 1077.5957776179698 1077.59527496793 88.621 1 -0.06990702212581502 0.019952695736551642 0.9438714419765777 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574', 'ZNF574|p.Q224Sfs*144|1|0.3|ENSG00000105732|chr19:42079275-42079275|C/-|frameshift_variant'] 130291 12344 VTTELSTSI True PC9_epitope_Rep5 949.49679185269 949.49568993586 52.474 2 -0.06994634456769584 0.019952695736551642 0.9438714419765777 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G', 'PIK3C2G|p.K900Rfs*29|1|0.36|ENSG00000139144|chr12:18491461-18491462|AG/-|frameshift_variant', 'PIK3C2G|p.G1094Efs*4|1|0.24|ENSG00000139144|chr12:18505418-18505418|G/-|frameshift_variant'] 76236 11152 NSATGVPTV True PC9_epitope_Rep3 844.42904664604 844.4284949679301 47.896 1 -0.07001479107443641 0.019952695736551642 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 35369 16460 GTASGFYTV True PC9_epitope_Rep1 901.4181476091701 901.4175949679301 68.138 1 -0.07004381235920605 0.019992722568124847 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 140288 8870 YYDKHFTEF True NCI_RA007_Epitope_Rep5 1248.54513902744 1248.5440499358601 40.783 2 -0.07007897048904534 0.020011319534282018 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 19839 16497 ELVEHIISF True PC9_epitope_Rep2 1085.57571087973 1085.57460993586 68.697 2 -0.07008456223507101 0.020011319534282018 0.9438714419765777 ['nc|ENSG00000106336|O75426-2|FBXO24', 'nc|ENSG00000106336|O75426-4|FBXO24', 'ENSG00000106336|ENST00000241071|FBXO24', 'nc|ENSG00000106336|O75426-3|FBXO24', 'ENST00000474649.1_1_7:100184248-100189648:+|nuORF'] 3047 14125 AFVTFDDHD True PC9_epitope_Rep4 1065.4403396057298 1065.43924993586 62.236 2 -0.07008789739953651 0.020011319534282018 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3', 'ENST00000432375.1_1_6:32293389-32293596:+|nuORF', 'ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000510646.1_1_5:135764749-135765112:+|nuORF', 'ENST00000575692.1_1_17:2210089-2210875:+|nuORF'] 86034 15407 QPLGTLPQA True PC9_epitope_Rep1 923.5076313199098 923.50652993586 64.081 2 -0.07009151345086777 0.020011319534282018 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 6538 6765 APVFTQRP True NCI_RA007_Epitope_Rep4 914.4974009893799 914.49630993586 32.64 2 -0.07010148279347542 0.020030318342597272 0.9438714419765777 ['SDK1|p.P1422Lfs*13|1|0.1|ENSG00000146555|chr7:4145758-4145759|CC/T|frameshift_variant', 'nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 100062 6301 SLKPHSVPP True H1975_Epitope_Rep3 960.53926580136 960.53816993586 29.241 2 -0.07010602098405778 0.020030318342597272 0.9438714419765777 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA', 'MGA|p.L2495Sfs*11|1|0.15|ENSG00000174197|chr15:41761821-41761822|-/A|frameshift_variant', 'MGA|p.T1565Hfs*11|1|0.37|ENSG00000174197|chr15:41742650-41742650|G/-|frameshift_variant', 'MGA|p.K937Rfs*57|1|0.1|ENSG00000174197|chr15:41711074-41711074|A/-|frameshift_variant'] 46886 15242 IVIDPKNPL True PC9_epitope_Rep4 1007.60153170475 1007.60042993586 66.558 2 -0.07011382439910317 0.020030318342597272 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 2742 8361 AEVAAAVVA True H1975_Epitope_Rep3 799.4439684341899 799.44341496793 37.145 1 -0.07014337401132997 0.020049720071952624 0.9438714419765777 ['ENSG00000117472|ENST00000372003|TSPAN1'] 91648 9822 RPFQGTMGV True PC9_epitope_Rep6 991.4909357099498 991.48982993586 48.244 2 -0.0701518188344663 0.020049720071952624 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 76277 10698 NSDPGLAVGY True H1975_Epitope_Rep3 991.46107505031 991.45996993586 46.226 2 -0.07016009082870492 0.020063848702820658 0.9438714419765777 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 49478 11642 KIYEGQVEV True PC9_epitope_Rep1 1063.55497543515 1063.55447496793 49.66 1 -0.07019535628245918 0.020063848702820658 0.9438714419765777 ['ENSG00000122406|ENST00000370321|RPL5', 'ENST00000454085.2_1_15:28141134-28141371:+|nuORF'] 84524 9648 QGVVTTLENV True PC9_epitope_Rep6 1058.56078909158 1058.5596899358602 47.465 2 -0.07020942795335704 0.020063848702820658 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'ENST00000492816.6_1_2:216226280-216244056:-|nuORF'] 41192 17121 IAAGIFNDL True NCI_RA007_Epitope_Rep2 932.4967322830399 932.49618496793 71.335 1 -0.07022480607822754 0.020063848702820658 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 20341 12073 EPGFSEVLP True H1975_Epitope_Rep3 973.4756624852898 973.47456993586 51.603 2 -0.07025269751847033 0.020063848702820658 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 113943 13073 TRKDIAVI True PC9_epitope_Rep6 914.5549158654999 914.55380993586 61.892 2 -0.07029842037370854 0.020063848702820658 0.9438714419765777 ['ERCC2|p.E512K|1|0.17|ENSG00000104884|chr19:45355674-45355674|C/T|missense_variant'] 98788 19540 SISSGGFYGV True PC9_epitope_Rep1 972.45526139388 972.45416993586 79.983 2 -0.0703079076461409 0.020063848702820658 0.9438714419765777 ['nc|ENSG00000074219|Q15562-3|TEAD2', 'EGFR-TEAD2|1|fusion', 'EGFR-TEAD2|3|fusion', 'EGFR-TEAD2|2|fusion', 'nc|ENSG00000074219|Q15562|TEAD2', 'nc|ENSG00000074219|Q15562-2|TEAD2', 'ENSG00000074219|ENST00000593945|TEAD2'] 4005 13625 AHGVSLVL True PC9_epitope_Rep2 794.46503823194 794.46394993586 57.699 2 -0.07039656040454488 0.020063848702820658 0.9438714419765777 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 64091 11524 LQEDPPAGV True PC9_epitope_Rep3 924.4552613938798 924.45416993586 49.335 2 -0.0703975286130073 0.020063848702820658 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 56721 13950 LEAGVSMLP True H1975_Epitope_Rep2 915.47355431031 915.47300496793 58.808 1 -0.07045730084509862 0.020063848702820658 0.9438714419765777 ['ENST00000441052.1_1_7:44079131-44079272:+|nuORF'] 63721 17315 LPQSFLLL True H1975_Epitope_Rep1 929.5586042636099 929.55750993586 72.064 2 -0.07045801800822546 0.020063848702820658 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 117431 14161 VADPVEAVL True NCI_RA007_Epitope_Rep5 911.4963979298699 911.49530993586 61.161 2 -0.07055276863558314 0.020063848702820658 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF', 'ENST00000537905.5_1_11:71735188-71747007:-|nuORF'] 96679 7053 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.41776993586 32.056 2 -0.07055380254886374 0.020063848702820658 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 107526 9347 TADGAHFEL True NCI_RA007_Epitope_Rep4 959.43486030247 959.43376993586 42.808 2 -0.07055722232746717 0.020063848702820658 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP', 'ENST00000546538.1_1_19:16643407-16652813:-|nuORF'] 34152 6641 GPEGEAVPAA True H1975_Epitope_Rep2 896.4239612655998 896.42286993586 30.453 2 -0.07058320870780702 0.020063848702820658 0.9438714419765777 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 116909 14685 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47054993586 61.623 2 -0.07060565117389096 0.020083648192673713 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 20232 21662 ENVLAIISL True PC9_epitope_Rep5 970.5698972233 970.5693449679301 88.37 1 -0.0706172915931172 0.02010304071118295 0.9438714419765777 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000582313.5_1_18:245829-268019:-|nuORF', 'nc|ENSG00000079134|Q96FV9-2|THOC1'] 83214 18806 QAADLAYQL True PC9_epitope_Rep3 991.4974605590301 991.49636993586 77.563 2 -0.07062369899182777 0.02010304071118295 0.9438714419765777 ['ENSG00000147113|ENST00000398000|DIPK2B', 'DIPK2B|p.D262Y|1|0.55|ENSG00000147113|chrX:45154087-45154087|C/A|missense_variant'] 101474 18441 SNPVDILTYV True H1975_Epitope_Rep1 1119.58119018299 1119.58008993586 76.872 2 -0.07069482067248947 0.020122838209148213 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 77522 6881 NYQKRFQNL True PC9_epitope_Rep2 1209.6254550368096 1209.6243499358602 31.869 2 -0.07071455696940226 0.020138159489375456 0.9438714419765777 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 11622 10117 DHARTITVAL True PC9_epitope_Rep6 1095.60365696307 1095.60254993586 49.528 2 -0.07075688088863405 0.020138159489375456 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 101681 17747 SPFTVGVAA True PC9_epitope_Rep5 847.4439684341899 847.44341496793 73.282 1 -0.07079395993308212 0.020138159489375456 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 76961 19019 NVPEGLLATV True PC9_epitope_Rep6 1011.56006081559 1011.5594749679301 85.8 1 -0.07079498172943492 0.020138159489375456 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 9171 15712 AVNPRFVAI True PC9_epitope_Rep1 985.5709002828099 985.56980993586 65.259 2 -0.07081871376773721 0.020138159489375456 0.9438714419765777 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C', 'ENST00000551059.1_1_12:109094839-109125250:-|nuORF'] 76005 6753 NRISHGEVL True PC9_epitope_Rep5 1023.5461420869499 1023.54504993586 30.947 2 -0.0708499290681801 0.020138159489375456 0.9438714419765777 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 138318 14881 YRAPELVL True PC9_epitope_Rep4 959.5440168286299 959.54346496793 65.177 1 -0.07085208992875511 0.020138159489375456 0.9438714419765777 ['nc|ENSG00000273345|Q8IVW4-2|CDKL3', 'ENSG00000006837|ENST00000265334|CDKL3'] 36777 10082 GVPENGYQTLY True H1975_Epitope_Rep3 1239.5771674317102 1239.57606993586 43.819 2 -0.07085740948438018 0.020138159489375456 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 5636 5577 APAFKYFIRRD True NCI_RA007_Epitope_Rep3 1382.7459045226599 1382.74480993586 28.93 2 -0.07086512087043832 0.020138159489375456 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 90327 4802 RIFEPPPPK True NCI_RA007_Epitope_Rep5 1079.61276509479 1079.6116699358602 25.158 2 -0.07089131136020711 0.020138159489375456 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15'] 101512 10865 SPAAPVITA True PC9_epitope_Rep6 825.45961849833 825.45852993586 52.65 2 -0.07092250713895551 0.020138159489375456 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 71582 22690 MLFPGSIAL True PC9_epitope_Rep2 947.51502519947 947.51392993586 92.771 2 -0.07093542217993182 0.020138159489375456 0.9438714419765777 ['ENSG00000101367|ENST00000375571|MAPRE1'] 108946 5559 TETQPPAAP True H1975_Epitope_Rep2 910.4396113297398 910.4390649679301 26.39 1 -0.07094832961250826 0.020174482006543076 0.9438714419765777 ['ENSG00000167470|ENST00000682408|MIDN'] 103770 16006 SRFPEALRL True PC9_epitope_Rep5 1087.61382772395 1087.6127299358602 66.558 2 -0.07098437574216984 0.020174482006543076 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 101473 14954 SNPVDILTY True H1975_Epitope_Rep3 1020.5127762699999 1020.51166993586 62.908 2 -0.07100529440062472 0.020174482006543076 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000111716|ENST00000350669|LDHB', 'ENSG00000171989|ENST00000307144|LDHAL6B'] 116256 19436 TVVATVLAT True PC9_epitope_Rep5 873.5171333744499 873.51602993586 79.811 2 -0.07104378884820296 0.020174482006543076 0.9438714419765777 ['ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7'] 75452 14144 NQIECHPYL True PC9_epitope_Rep1 1115.50697969691 1115.50588993586 59.228 2 -0.0710577758323163 0.020174482006543076 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'nc|ENSG00000165568|Q96JD6-4|AKR1E2', 'ENSG00000165568|ENST00000298375|AKR1E2'] 104155 12433 SSAPGLTSV True PC9_epitope_Rep1 817.4181476091701 817.41704993586 52.686 2 -0.07108703089959709 0.020174482006543076 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1'] 11803 11443 DHLFFCLK True NCI_RA007_Epitope_Rep2 1021.50552314493 1021.50442993586 49.102 2 -0.0710891786877353 0.020174482006543076 0.9438714419765777 ['ENST00000447608.1_2_1:103540322-103544337:-|nuORF'] 29030 16823 FTLGQLIL True H1975_Epitope_Rep2 903.5429541994699 903.54184993586 69.956 2 -0.07110052588812459 0.020174482006543076 0.9438714419765777 ['nc|ENSG00000197847|A6NK97|SLC22A20P'] 126007 8797 VPAGGAVAVSA True PC9_epitope_Rep6 897.4919812557699 897.4914349679301 43.738 1 -0.07116478928321715 0.020174482006543076 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 96939 14833 SEVEIAWPA True H1975_Epitope_Rep1 1000.4865615221598 1000.48597496793 62.284 1 -0.07117188488667825 0.020174482006543076 0.9438714419765777 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 140606 19938 YYMEKELANF True PC9_epitope_Rep3 1306.5903749676997 1306.58926993586 81.934 2 -0.07120142726908 0.020212830402035416 0.9438714419765777 ['nc|ENSG00000105699|Q86X29-6|LSR', 'nc|ENSG00000105699|Q86X29-5|LSR', 'nc|ENSG00000105699|Q86X29-2|LSR', 'ENSG00000105699|ENST00000605618|LSR', 'nc|ENSG00000105699|Q86X29-3|LSR', 'nc|ENSG00000105699|Q86X29-4|LSR', 'nc|ENSG00000105699|Q86X29|LSR'] 105267 15886 STTGMLTGV True PC9_epitope_Rep5 865.42151873745 865.4209649679301 66.095 1 -0.07124861070180692 0.020212830402035416 0.9438714419765777 ['ENSG00000066084|ENST00000301180|DIP2B'] 45862 13279 ISQKCQVLD True PC9_epitope_Rep2 1032.5273807883198 1032.5262899358602 56.354 2 -0.0712678095254241 0.020212830402035416 0.9438714419765777 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1'] 6829 18557 AQIDGTLSTI True PC9_epitope_Rep3 1017.5342399905701 1017.5336749679301 76.6 1 -0.07128956287858117 0.020212830402035416 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 119828 7997 VEVPAPAA True H1975_Epitope_Rep3 752.4068546494799 752.40630496793 35.731 1 -0.07131978263818083 0.020212830402035416 0.9438714419765777 ['ENST00000462672.1_1_10:131506162-131515894:+|nuORF', 'ENSG00000170430|ENST00000651593|MGMT'] 126792 7475 VPSPVSNSA True PC9_epitope_Rep1 856.4290466460401 856.4279499358599 33.572 2 -0.07139789663281333 0.020251988854339136 0.9438714419765777 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160507-49161165:-|nuORF'] 131877 18022 VYDPTTNAW True PC9_epitope_Rep2 1065.4767251144501 1065.47562993586 74.627 2 -0.07145353627471346 0.020251988854339136 0.9438714419765777 ['nc|ENSG00000109466|O95198-3|KLHL2', 'ENSG00000109466|ENST00000226725|KLHL2', 'nc|ENSG00000109466|O95198-2|KLHL2'] 24625 12068 FAQTLQETL True NCI_RA007_Epitope_Rep3 1049.53932537101 1049.53822993586 54.589 2 -0.07146181469014055 0.020251988854339136 0.9438714419765777 ['ENSG00000122547|ENST00000242108|EEPD1'] 83217 8624 QAAHLIQAL True NCI_RA007_Epitope_Rep3 963.55016483823 963.54906993586 40.999 2 -0.07151490445753028 0.02026399709360998 0.9438714419765777 ['ENSG00000136463|ENST00000258975|TACO1'] 132629 11000 VYPTKTFPNL True NCI_RA007_Epitope_Rep5 1178.6335601090198 1178.6324699358602 48.946 2 -0.07151971428310913 0.02026399709360998 0.9438714419765777 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 89751 8408 REYVPPPVP True H1975_Epitope_Rep1 1052.5654805491997 1052.5643899358602 37.27 2 -0.07153570499934098 0.02026399709360998 0.9438714419765777 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1'] 39587 10095 HPKYSDMIVA True PC9_epitope_Rep2 1159.56957995347 1159.56848993586 44.164 2 -0.07156065753409477 0.02026399709360998 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 34431 5888 GPYGGAQPSA True PC9_epitope_Rep4 903.40864555463 903.40754993586 29.547 2 -0.07156790534023486 0.02026399709360998 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14', 'RBM14|p.P416Hfs*56|1|0.25|ENSG00000239306|chr11:66625120-66625120|C/-|frameshift_variant'] 84186 5987 QESPPAAAV True H1975_Epitope_Rep2 868.4290466460399 868.4279499358599 28.008 2 -0.07157621823925814 0.02026399709360998 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 57906 4128 LEQKPTDAPP True H1975_Epitope_Rep3 1094.5607890915799 1094.5596899358602 21.002 2 -0.07158310070687454 0.02026399709360998 0.9438714419765777 ['nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74'] 26374 12236 FIHQHFVEV True PC9_epitope_Rep4 1154.5872786229402 1154.5861899358601 54.884 2 -0.07158708719503558 0.02026399709360998 0.9438714419765777 ['KLHL18|p.S161R|1|0.62|ENSG00000114648|chr3:47330032-47330032|C/A|missense_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 104258 16686 SSDSTFLVL True NCI_RA007_Epitope_Rep5 967.4862271689899 967.4856749679301 70.949 1 -0.07160653701722966 0.02026399709360998 0.9438714419765777 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF'] 107442 15884 SYVPKVAGL True PC9_epitope_Rep1 932.5331177917599 932.53202993586 65.908 2 -0.0716426772148228 0.02026399709360998 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 103170 10531 SQPEKVYTL True PC9_epitope_Rep5 1063.55497543515 1063.5538699358601 45.495 2 -0.07164488688974505 0.02026399709360998 0.9438714419765777 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 8309 17906 ATLLDKAVL True PC9_epitope_Rep3 942.57498260374 942.57388993586 74.078 2 -0.07164587094953481 0.02026399709360998 0.9438714419765777 ['ENSG00000158445|ENST00000371741|KCNB1'] 26437 22620 FILPIGATV True PC9_epitope_Rep1 929.5586042636099 929.55750993586 91.817 2 -0.07166307374765118 0.02026399709360998 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5', 'nc|ENSG00000115902|P43007-2|SLC1A4', 'ENSG00000115902|ENST00000234256|SLC1A4'] 82036 6559 PSTSVPAP True H1975_Epitope_Rep3 754.3861192049 754.3855749679301 30.188 1 -0.07166924234156193 0.02026399709360998 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2'] 116914 13563 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47107496793 60.065 1 -0.07167110775376194 0.02026399709360998 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 120053 23273 VFFEVSPVSF True PC9_epitope_Rep1 1156.5804619069997 1156.57936993586 94.305 2 -0.07168290573842828 0.02026399709360998 0.9438714419765777 ['ENSG00000087263|ENST00000566157|OGFOD1', 'nc|ENSG00000087263|Q8N543-2|OGFOD1'] 102387 13509 SPVSLQGNI True PC9_epitope_Rep5 913.48689587533 913.48578993586 56.982 2 -0.07168748355687891 0.02026399709360998 0.9438714419765777 ['ENST00000524669.5_1_11:57416538-57416754:-|nuORF'] 20140 16708 ENLRTGLEL True PC9_epitope_Rep5 1043.56112344475 1043.56002993586 69.274 2 -0.07168884165551953 0.02026399709360998 0.9438714419765777 ['ENSG00000140795|ENST00000394809|MYLK3', 'ENST00000564731.5_1_16:46761123-46772038:-|nuORF'] 53516 15625 KVPEIEVTV True PC9_epitope_Rep2 1012.5804619069999 1012.57936993586 65.378 2 -0.07169464048166617 0.02026399709360998 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 131978 21352 VYGFPVNQL True PC9_epitope_Rep5 1035.53893144819 1035.5378299358601 87.19 2 -0.07170880437268524 0.02026399709360998 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 109945 9824 THSEPLSTI True PC9_epitope_Rep5 983.49237517859 983.49126993586 42.755 2 -0.0717571233860381 0.020281314955703993 0.9438714419765777 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-5|CCDC14'] 116145 20692 TVTDSMFAV True PC9_epitope_Rep1 969.4477334852899 969.44662993586 84.415 2 -0.07178971636128609 0.020281314955703993 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 44724 10663 IPQLNSKAV True PC9_epitope_Rep3 968.5654805492 968.56438993586 45.962 2 -0.07179931670715431 0.020281314955703993 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 79969 11287 PITQLTSSIG True H1975_Epitope_Rep2 1015.55497543515 1015.55386993586 48.463 2 -0.0718040859563475 0.020281314955703993 0.9438714419765777 ['FOXRED2|p.V437G|1|0.23|ENSG00000100350|chr22:36498063-36498063|A/C|missense_variant'] 77426 16314 NYNDFGNY True PC9_epitope_Rep5 1005.3828247296099 1005.38172993586 67.748 2 -0.07182907649762069 0.020281314955703993 0.9438714419765777 ['nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF', 'AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 134290 18641 WRSLPLLPV True PC9_epitope_Rep6 1079.64915060351 1079.6480499358602 84.346 2 -0.07184645468827143 0.020281314955703993 0.9438714419765777 ['ENST00000402802.7_1_7:536981-537197:-|nuORF'] 74885 7692 NLQTVNVDEN True NCI_RA007_Epitope_Rep5 1144.53603089572 1144.53547496793 36.291 1 -0.07186245711106774 0.020281314955703993 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 39535 17169 HPFGFVAV True PC9_epitope_Rep4 872.4544735482399 872.45336993586 74.047 2 -0.07190628736685763 0.020297808805132964 0.9438714419765777 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 86531 6817 QRAPGQQVL True PC9_epitope_Rep1 995.5512274673898 995.55012993586 31.028 2 -0.0719216386363464 0.020297808805132964 0.9438714419765777 ['ENSG00000140987|ENST00000396852|ZSCAN32'] 85940 17129 QPAGVSLVSV True PC9_epitope_Rep4 955.53384606775 955.53274993586 73.891 2 -0.07192375596943952 0.020297808805132964 0.9438714419765777 ['ENSG00000196663|ENST00000359520|TECPR2'] 1270 6798 AEDPSQLPS True H1975_Epitope_Rep3 942.42944056886 942.42834993586 31.101 2 -0.07192594375317972 0.020297808805132964 0.9438714419765777 ['ENST00000482943.1_1_1:201932715-201938679:+|nuORF', 'ENSG00000134375|ENST00000367287|TIMM17A'] 1828 12102 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.48512993586 51.634 2 -0.0719453257496843 0.020297808805132964 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 27616 14440 FPTVPGVY True H1975_Epitope_Rep3 878.4538048418999 878.4532549679301 60.899 1 -0.07196625142568354 0.020297808805132964 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 31692 9948 GEIGLGTPP True H1975_Epitope_Rep1 839.43888305375 839.43833496793 43.202 1 -0.07198922400270223 0.020297808805132964 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA'] 103765 16334 SRFPEALRL True PC9_epitope_Rep3 1087.61382772395 1087.6127299358602 67.964 2 -0.0720050903294881 0.020297808805132964 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 34893 7738 GQVPPGESV True PC9_epitope_Rep5 868.42904664604 868.4279499358599 34.705 2 -0.07203394547910917 0.020297808805132964 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 52515 4982 KPPPPPPPP True PC9_epitope_Rep1 922.5276384884999 922.52654993586 24.023 2 -0.0720652872027124 0.020317165684771207 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 101513 10798 SPAAPVITA True PC9_epitope_Rep6 825.45961849833 825.4590749679301 52.375 1 -0.07208682049705546 0.020317165684771207 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 8853 13739 AVFPSIVGRPR True PC9_epitope_Rep1 1197.69822605425 1197.6965849037902 57.693 3 -0.07215886456167739 0.02033446975045894 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 32718 13618 GHSSVFQAL True PC9_epitope_Rep2 944.47158016436 944.47048993586 57.674 2 -0.072166603847903 0.02033446975045894 0.9438714419765777 ['ENST00000581005.1_1_17:71069947-71084903:-|nuORF', 'ENST00000582179.5_1_17:70943804-71084903:-|nuORF', 'ENSG00000133195|ENST00000255559|SLC39A11', 'nc|ENSG00000133195|Q8N1S5|SLC39A11'] 13403 11199 DNKTSQPITL True PC9_epitope_Rep4 1115.58225281215 1115.5811499358601 50.855 2 -0.07220066286389451 0.02033446975045894 0.9438714419765777 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2'] 27938 9269 FQPPIHQSL True NCI_RA007_Epitope_Rep5 1065.56072952193 1065.5596299358601 42.3 2 -0.07220156580671336 0.02033446975045894 0.9438714419765777 ['ENSG00000055163|ENST00000620254|CYFIP2', 'CYFIP2|p.A905Sfs*86|1|0.34|ENSG00000055163|chr5:157341122-157341122|G/TC|frameshift_variant', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'ENSG00000273749|ENST00000617928|CYFIP1', 'nc|ENSG00000273749|Q7L576-3|CYFIP1', 'nc|ENSG00000273749|Q7L576-2|CYFIP1'] 18596 12549 ELAEQTLNNIK True PC9_epitope_Rep2 1271.6721304457099 1271.6710299358601 53.578 2 -0.07221040379578537 0.02033446975045894 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 69168 13877 LVLVGDGG True PC9_epitope_Rep4 728.40685464948 728.40630496793 61.278 1 -0.07222230048247734 0.02033446975045894 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 5956 7250 APIRPDIVN True NCI_RA007_Epitope_Rep4 993.5607295219299 993.55962993586 34.522 2 -0.07227370198795544 0.02033446975045894 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF', 'ENST00000561775.5_1_15:66795189-66797161:-|nuORF', 'ENST00000561554.5_1_15:66795666-66797161:-|nuORF', 'ENST00000567229.5_1_15:66795359-66797161:-|nuORF'] 24709 14745 FAVIGRSSL True PC9_epitope_Rep2 948.53926580136 948.53816993586 61.984 2 -0.07230498762267312 0.020354232227870573 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'ENST00000502426.5_1_17:48755439-48768558:+|nuORF'] 102680 3576 SQDPGTHVV True PC9_epitope_Rep4 938.4457593393399 938.44466993586 19.852 2 -0.07234613380568858 0.020372761013393578 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11'] 72068 15090 MRCALALSA True PC9_epitope_Rep5 934.4728431176599 934.47174993586 63.05 2 -0.07237064662793861 0.020372761013393578 0.9438714419765777 ['ENSG00000128567|ENST00000378555|PODXL', 'nc|ENSG00000128567|O00592-2|PODXL'] 107252 10801 SYPRRFSTL True PC9_epitope_Rep5 1125.59309227937 1125.59143490379 46.536 3 -0.07241169308748581 0.020372761013393578 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 130584 6713 VVAAHLAGA True PC9_epitope_Rep3 807.46028720467 807.45918993586 30.843 2 -0.0724483563210265 0.020372761013393578 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 46115 7876 ITADVNHNL True PC9_epitope_Rep4 995.50360856863 995.50250993586 37.722 2 -0.07249633138285602 0.020391698097985033 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1'] 4931 4381 ALHHGIDLEK True NCI_RA007_Epitope_Rep4 1131.6036569630699 1131.6020249037902 23.203 3 -0.07252307827573506 0.020391698097985033 0.9438714419765777 ['ENSG00000115866|ENST00000264161|DARS1', 'nc|ENSG00000115866|P14868-2|DARS1', 'ENST00000478212.5_1_2:136664888-136669084:-|nuORF', 'ENST00000491481.1_1_2:136668634-136670100:-|nuORF', 'ENST00000489964.5_1_2:136664888-136672125:-|nuORF'] 104153 4216 SSAKPGPAL True NCI_RA007_Epitope_Rep4 826.4548674710599 826.45376993586 22.529 2 -0.07255042529194033 0.020391698097985033 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB', 'nc|ENSG00000186260|Q9ULH7-2|MRTFB', 'nc|ENSG00000186260|Q9ULH7-3|MRTFB'] 16162 5500 EEERNVPLA True H1975_Epitope_Rep2 1055.5247379360299 1055.52364993586 26.168 2 -0.07272904415321761 0.020431213569714207 0.9438714419765777 ['ENSG00000113328|ENST00000340828|CCNG1'] 30815 10223 GAPQVVAVTG True PC9_epitope_Rep3 897.4919812557698 897.49088993586 44.273 2 -0.07274405576206093 0.020431213569714207 0.9438714419765777 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF'] 8408 8100 ATQMVRMILK True NCI_RA007_Epitope_Rep3 1189.6675201729297 1189.6658849037901 38.962 3 -0.07281982015355028 0.020470313004194902 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 34823 19620 GQVEDVVGNL True PC9_epitope_Rep3 1028.5138388991597 1028.51274993586 80.705 2 -0.07282166671355937 0.020470313004194902 0.9438714419765777 ['ENSG00000196878|ENST00000356082|LAMB3'] 80638 18859 PLPPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 77.325 2 -0.07283042803278164 0.020470313004194902 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 30250 5852 GAAGGLRGV True PC9_epitope_Rep5 756.4242360491199 756.42312993586 27.502 2 -0.07292385345615918 0.020526676614106544 0.9438714419765777 ['ENST00000291442.3_1_19:17351565-17356474:-|nuORF'] 62541 20614 LLTEQINLYL True H1975_Epitope_Rep2 1218.6859896047 1218.6848899358602 85.385 2 -0.07292741462230921 0.020526676614106544 0.9438714419765777 ['nc|ENSG00000006576|Q8N3S3-3|PHTF2', 'nc|ENSG00000006576|Q8N3S3-2|PHTF2', 'ENSG00000006576|ENST00000416283|PHTF2', 'ENSG00000116793|ENST00000369604|PHTF1'] 112920 22579 TPQSIFIFA True PC9_epitope_Rep2 1022.5436824754598 1022.5431749679301 92.349 1 -0.07294926761312774 0.020526676614106544 0.9438714419765777 ['DNAJB9|p.C13F|1|0.12|ENSG00000128590|chr7:108571764-108571764|G/T|missense_variant', 'ENST00000465725.1_1_7:108212170-108215134:+|nuORF', 'ENST00000491582.1_1_7:108210452-108212392:+|nuORF', 'ENSG00000128590|ENST00000249356|DNAJB9'] 30107 14745 FYPPKVELF True NCI_RA007_Epitope_Rep5 1138.60628273202 1138.6051899358602 63.39 2 -0.07300809624938041 0.020526676614106544 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 34544 6071 GQEVNELKT True PC9_epitope_Rep1 1016.51383889916 1016.51274993586 28.166 2 -0.07302601390671258 0.020526676614106544 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 54736 13539 LAELTGIK True PC9_epitope_Rep1 843.5065686907499 843.50546993586 56.934 2 -0.07311807212958399 0.020526676614106544 0.9438714419765777 ['ENSG00000123066|ENST00000281928|MED13L'] 109543 4997 THAPATLEA True PC9_epitope_Rep2 909.45559574705 909.45448993586 24.592 2 -0.07314032174574905 0.020526676614106544 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 140837 19714 YYTDIMHTL True PC9_epitope_Rep2 1155.5270464351497 1155.52647496793 81.219 1 -0.0731789750304171 0.020526676614106544 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 103798 14177 SRGDFVVEY True PC9_epitope_Rep2 1070.50327421546 1070.50277496793 59.799 1 -0.0732176229049622 0.020526676614106544 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 14335 8002 DTDPSIYR True H1975_Epitope_Rep2 965.4454249861699 965.44432993586 35.727 2 -0.0732924009720782 0.020526676614106544 0.9438714419765777 ['nc|ENSG00000196364|A6NIE9|PRSS29P'] 4249 9012 AIIEEERLK True H1975_Epitope_Rep1 1099.62372370131 1099.62262993586 39.569 2 -0.07333474097408939 0.02054559751597879 0.9438714419765777 ['ENSG00000138587|ENST00000260453|MNS1'] 116709 16588 TYKNFFYLI True NCI_RA007_Epitope_Rep3 1207.62774645259 1207.62664993586 73.034 2 -0.07336440787970112 0.02054559751597879 0.9438714419765777 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 112823 10382 TPLYTDNTA True PC9_epitope_Rep1 994.46074069714 994.4596499358599 44.818 2 -0.07337607870419169 0.02054559751597879 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 71954 10954 MPTTLEGA True PC9_epitope_Rep6 818.3844049527399 818.38385496793 53.016 1 -0.07338539429340636 0.020562443302086484 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 6091 12531 APM[Oxidation]PPIIHA True PC9_epitope_Rep2 961.50552352537 961.50442993586 53.507 2 -0.07343956518995784 0.020562443302086484 0.9438714419765777 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1'] 117059 13936 TYQRWQFTL True NCI_RA007_Epitope_Rep4 1241.61930702721 1241.61820993586 60.881 2 -0.07344692112430255 0.020562443302086484 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 81256 11416 PPPLPPPPP True PC9_epitope_Rep4 907.51673945163 907.51564993586 51.682 2 -0.07344910026668355 0.020562443302086484 0.9438714419765777 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'ENSG00000135723|ENST00000258201|FHOD1', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000068489|ENST00000262293|PRR11', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1', 'ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12', 'ENSG00000171992|ENST00000307662|SYNPO', 'ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENSG00000122574|ENST00000242140|WIPF3', 'ENSG00000090470|ENST00000204549|PDCD7'] 133535 20331 WHIDTILHV True PC9_epitope_Rep1 1132.60292868708 1132.60182993586 83.034 2 -0.07349815321186891 0.020562443302086484 0.9438714419765777 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF', 'ENST00000556741.5_1_14:24032738-24033292:-|nuORF'] 51855 9034 KKLPPLPSL True NCI_RA007_Epitope_Rep5 991.64300259391 991.64190993586 41.406 2 -0.07355742772185887 0.020562443302086484 0.9438714419765777 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 12519 13155 DLAGSIIGK True PC9_epitope_Rep6 872.4967322830399 872.49562993586 62.242 2 -0.07363673011282972 0.020562443302086484 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 93881 4424 RVHEVFRVGK True NCI_RA007_Epitope_Rep4 1225.7043740638499 1225.70272490379 23.379 3 -0.07365616770040888 0.020562443302086484 0.9438714419765777 ['ENST00000393094.6_1_11:107879697-107879871:+|nuORF'] 135026 7290 YAHPSGTAL True PC9_epitope_Rep3 915.4450310633499 915.44392993586 33.048 2 -0.07368217266517946 0.02058135784550879 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF'] 128788 13729 VSREGSLAL True PC9_epitope_Rep3 930.5134449763399 930.51234993586 57.892 2 -0.07368948000337447 0.02058135784550879 0.9438714419765777 ['ENST00000545251.6_1_1:175130158-175130197:-|nuORF'] 116892 18615 TYPAELNNI True PC9_epitope_Rep1 1033.50802524273 1033.5069299358602 76.39 2 -0.07376958603727685 0.02058135784550879 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 27247 17211 FLVQNIHTL True PC9_epitope_Rep4 1083.60767971435 1083.60658993586 74.211 2 -0.07378970225919762 0.020600270101388804 0.9438714419765777 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF'] 66887 11275 LSWMDNAAEEP True H1975_Epitope_Rep2 1261.5285029871297 1261.52740993586 48.416 2 -0.07379107956401519 0.020600270101388804 0.9438714419765777 ['ENSG00000139874|ENST00000267377|SSTR1'] 57080 9279 LEELEAAR True PC9_epitope_Rep1 929.4818104948899 929.48070993586 40.546 2 -0.07379344548525786 0.020600270101388804 0.9438714419765777 ['ENSG00000108479|ENST00000588479|GALK1'] 22360 18571 ETEPVFWYY True H1975_Epitope_Rep2 1232.5389910178399 1232.5378899358602 77.067 2 -0.07379850497408487 0.020617517836269098 0.9438714419765777 ['ENST00000564111.5_1_16:12070663-12146080:+|nuORF', 'nc|ENSG00000048471|Q8TEQ0-2|SNX29', 'ENSG00000048471|ENST00000566228|SNX29'] 53608 17956 KVVQFLMKL True PC9_epitope_Rep4 1104.6729228232 1104.6718299358602 77.122 2 -0.07380066370575147 0.020617517836269098 0.9438714419765777 ['ENST00000441447.1_1_1:35734647-35790997:+|nuORF', 'ENST00000314607.10_1_1:35734570-35791000:+|nuORF'] 136890 21316 YIYSFFLL True PC9_epitope_Rep1 1064.55826991044 1064.5571699358602 86.82 2 -0.07380071990973477 0.020617517836269098 0.9438714419765777 ['ENST00000518857.5_1_8:104081005-104081197:+|nuORF'] 130010 11006 VTPNATPGSM True PC9_epitope_Rep1 973.45388149489 973.45278993586 47.224 2 -0.07380353724459476 0.020617517836269098 0.9438714419765777 ['ENST00000425841.1_1_2:55451250-55451310:-|nuORF'] 53894 15465 KYIEGVSDF True PC9_epitope_Rep5 1056.51277627 1056.51227496793 64.498 1 -0.07380585255547173 0.020617517836269098 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 60339 6955 LIGGSHLIL True H1975_Epitope_Rep3 921.5647522732099 921.56364993586 31.714 2 -0.07382629361006718 0.020617517836269098 0.9438714419765777 ['ENSG00000197275|ENST00000336148|RAD54B'] 63772 14319 LPSDIAAEA True PC9_epitope_Rep1 885.4443623570099 885.44381496793 59.901 1 -0.07384090171091626 0.020617517836269098 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 11591 11339 DGYDYDGYR True PC9_epitope_Rep3 1122.42541781758 1122.4243299358602 48.622 2 -0.07385192015048399 0.020634344899850884 0.9438714419765777 ['ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF'] 776 8983 AAYEHFETM True NCI_RA007_Epitope_Rep5 1097.4487961144498 1097.4476899358601 41.21 2 -0.073862589125878 0.020634344899850884 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 60372 18215 LIIDENGVHEL True PC9_epitope_Rep4 1250.65066672514 1250.6495699358602 78.132 2 -0.07386811520317244 0.020634344899850884 0.9438714419765777 ['ENSG00000117143|ENST00000367925|UAP1', 'nc|ENSG00000117143|Q16222-3|UAP1', 'nc|ENSG00000117143|Q16222-2|UAP1'] 5057 11255 ALLKQIQEA True PC9_epitope_Rep2 1012.5916952970399 1012.59058993586 48.618 2 -0.07389278332195795 0.020634344899850884 0.9438714419765777 ['ENST00000484795.5_1_12:6761826-6762560:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-8|ING4', 'ENST00000488381.5_1_12:6760363-6764813:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-3|ING4', 'nc|ENSG00000111653|Q9UNL4-4|ING4', 'nc|ENSG00000111653|Q9UNL4-7|ING4', 'nc|ENSG00000111653|Q9UNL4-5|ING4', 'nc|ENSG00000111653|Q9UNL4-6|ING4', 'ENSG00000111653|ENST00000341550|ING4', 'nc|ENSG00000111653|Q9UNL4|ING4'] 60753 8110 LKEERRAQSV True PC9_epitope_Rep4 1214.67313350522 1214.67148490379 38.649 3 -0.07391970553999484 0.020634344899850884 0.9438714419765777 ['nc|ENSG00000135299|Q9Y2G4-4|ANKRD6', 'nc|ENSG00000135299|Q9Y2G4-3|ANKRD6', 'ENSG00000135299|ENST00000339746|ANKRD6', 'ENST00000479572.1_1_6:90331643-90337989:+|nuORF', 'ENST00000518253.5_1_6:90312741-90340720:+|nuORF'] 23764 15801 EYIRSLNQF True PC9_epitope_Rep2 1168.58767254576 1168.58656993586 66.038 2 -0.07393325115951145 0.020634344899850884 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 32733 6620 GHVFEESQVAG True NCI_RA007_Epitope_Rep4 1158.53055159246 1158.5294499358602 32.09 2 -0.07394571381257548 0.020634344899850884 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 118666 12527 VEAQLQELQVK True PC9_epitope_Rep4 1283.7085159544297 1283.7074099358601 56.004 2 -0.07395689529697283 0.020634344899850884 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 55461 22554 LAVADILFL True PC9_epitope_Rep4 973.58481901145 973.58372993586 94.992 2 -0.07401139178328445 0.020673396602792722 0.9438714419765777 ['TNS4-CCR7|1|fusion', 'ENSG00000126353|ENST00000246657|CCR7'] 6425 13202 APSGNFVAC True PC9_epitope_Rep5 864.37998827864 864.37943496793 55.788 1 -0.07406416907336066 0.020673396602792722 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 34866 7837 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42883496793 39.54 1 -0.0740788674926571 0.020673396602792722 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 38558 12778 HHFEQMLKL True PC9_epitope_Rep4 1181.6015487880898 1181.59990490379 57.013 3 -0.07410328453240612 0.02069146149816658 0.9438714419765777 ['nc|ENSG00000113569|O75694-2|NUP155', 'ENSG00000113569|ENST00000231498|NUP155'] 76182 13094 NRSRIQVWL True PC9_epitope_Rep4 1170.6621748986997 1170.66052490379 58.259 3 -0.07417084750868294 0.02069146149816658 0.9438714419765777 ['ENSG00000182004|ENST00000414487|SNRPE'] 87415 7571 QTDTLQNDY True H1975_Epitope_Rep2 1096.4672826295598 1096.46618993586 34.074 2 -0.07418177915033082 0.02069146149816658 0.9438714419765777 ['nc|ENSG00000134954|P14921|ETS1', 'ENSG00000134954|ENST00000392668|ETS1', 'nc|ENSG00000134954|P14921-5|ETS1', 'nc|ENSG00000134954|P14921-2|ETS1'] 104665 10688 STAAKIMGV True PC9_epitope_Rep5 876.4738886634799 876.47278993586 46.102 2 -0.07419408084228905 0.02069146149816658 0.9438714419765777 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31'] 4704 15798 ALDNFLDKL True NCI_RA007_Epitope_Rep1 1047.56006081559 1047.5589699358602 65.546 2 -0.07422380617030595 0.02069146149816658 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 116866 23229 TYNMVLNLL True PC9_epitope_Rep5 1079.56851732431 1079.56740993586 94.334 2 -0.07424807239681037 0.020710357193222798 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX'] 76841 8658 NVHAVFQEA True PC9_epitope_Rep4 1013.4930438849299 1013.49194993586 40.794 2 -0.07425452585056341 0.020710357193222798 0.9438714419765777 ['ENSG00000173156|ENST00000308831|RHOD'] 2756 5931 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 27.885 2 -0.07425931208080731 0.020710357193222798 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 52878 6433 KRFDDKYTL True PC9_epitope_Rep6 1184.6189726740397 1184.61733490379 33.371 3 -0.07428050807033175 0.020727162856279586 0.9438714419765777 ['ENSG00000118363|ENST00000263672|SPCS2'] 22138 12923 ESYSVYVY True NCI_RA007_Epitope_Rep2 1008.4440280038398 1008.44347496793 54.889 1 -0.07428932774878767 0.020727162856279586 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4'] 105317 8121 STVAQLVK True PC9_epitope_Rep3 844.5018176634799 844.50072993586 36.214 2 -0.07436261680208024 0.020727162856279586 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000573189.2_1_16:72039593-72040031:-|nuORF', 'ENST00000433223.2_9:43400186-43400471:+|nuORF', 'ENST00000586523.1_1_18:43668039-43668150:-|nuORF'] 9017 13825 AVIEAEKIAQV True PC9_epitope_Rep4 1169.66558851329 1169.66448993586 61.074 2 -0.07436973512871294 0.020727162856279586 0.9438714419765777 ['ENSG00000107566|ENST00000421367|ERLIN1'] 22216 10007 ETDKITLEV True H1975_Epitope_Rep2 1046.54955570154 1046.5484499358602 43.481 2 -0.07438441450906819 0.020727162856279586 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 72077 9782 MRDPDDQYKL True PC9_epitope_Rep5 1279.58668656959 1279.58503490379 42.596 3 -0.07445632379148193 0.020727162856279586 0.9438714419765777 ['ENSG00000130332|ENST00000252622|LSM7'] 115571 7161 TVIAKVNNV True PC9_epitope_Rep4 956.5654805492 956.56438993586 34.83 2 -0.07448380186922698 0.020727162856279586 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 97980 9484 SHSELIHNL True PC9_epitope_Rep1 1048.5301576696402 1048.5290699358602 41.337 2 -0.07449490231363465 0.020727162856279586 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 78381 6243 PAVFPAAR True NCI_RA007_Epitope_Rep3 827.4653725851099 827.46426993586 31.563 2 -0.07451319325207904 0.020744798694890335 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 6483 6260 APTGDLPRA True PC9_epitope_Rep4 896.4715801643599 896.47048993586 31.128 2 -0.07454978935057821 0.020744798694890335 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 14395 4859 DTFYRIHRRGP True H1975_Epitope_Rep2 1416.7374650972797 1416.7358249037902 23.777 3 -0.07456048145510398 0.020744798694890335 0.9438714419765777 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2'] 44397 10515 INELKELQK True H1975_Epitope_Rep1 1113.63937376545 1113.63826993586 45.398 2 -0.07457451766170888 0.020744798694890335 0.9438714419765777 ['nc|ENSG00000152359|Q8NA72-2|POC5', 'nc|ENSG00000152359|Q8NA72-3|POC5', 'ENSG00000152359|ENST00000428202|POC5'] 70859 5321 MEGKVPVAA True H1975_Epitope_Rep2 900.4738886634798 900.47278993586 25.52 2 -0.074575648270541 0.020744798694890335 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 4088 12989 AHSNLASVL True PC9_epitope_Rep3 910.4872302285 910.48612993586 54.989 2 -0.07459679439388187 0.020744798694890335 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 28666 15039 FSSPPVIL True H1975_Epitope_Rep2 858.4851049701799 858.4845549679301 62.999 1 -0.07464681776765437 0.020782986950217495 0.9438714419765777 ['ENSG00000171867|ENST00000379440|PRNP'] 110067 7909 TIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1005.4437110134398 1005.4431749679301 35.395 1 -0.07468248611334825 0.020782986950217495 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 21190 5976 ERERQYRKDKK True NCI_RA007_Epitope_Rep2 1534.8328220340998 1534.83118490379 27.854 3 -0.07468257554970892 0.020782986950217495 0.9438714419765777 ['ENSG00000159450|ENST00000614923|TCHH'] 71891 6058 MPNGTPHPTAA True PC9_epitope_Rep5 1092.50222866964 1092.50112993586 28.293 2 -0.07469250821370764 0.020782986950217495 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 85876 11126 QNIKELNTL True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 47.787 2 -0.07469420658241453 0.020782986950217495 0.9438714419765777 ['ENSG00000128313|ENST00000249044|APOL5'] 102098 8855 SPPVPGPSA True PC9_epitope_Rep5 807.41266830591 807.41156993586 39.006 2 -0.07471315383419255 0.020802706567049963 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 6248 5760 APRLQSEVA True PC9_epitope_Rep2 969.5243440132099 969.52324993586 27.55 2 -0.07473725763406505 0.02086186065243657 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 47204 15724 IYAPPLPSL True NCI_RA007_Epitope_Rep3 969.55351888317 969.55242993586 69.491 2 -0.07474196517028288 0.02086186065243657 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1'] 26931 18066 FLHDNMVEI True PC9_epitope_Rep2 1116.52738078832 1116.5262899358602 74.793 2 -0.07477711389069766 0.02086186065243657 0.9438714419765777 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3', 'LIG3|p.R614W|1|0.1|ENSG00000005156|chr17:34997754-34997754|C/T|missense_variant', 'ENST00000593099.5_1_17:33324760-33324883:+|nuORF'] 101648 9828 SPFPGHVGA True PC9_epitope_Rep1 867.42390169595 867.42280993586 42.666 2 -0.07482504520847696 0.020881577092688428 0.9438714419765777 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF', 'ENST00000437505.5_1_7:100465025-100465781:+|nuORF', 'ENST00000496260.1_1_7:100465025-100465611:+|nuORF', 'ENST00000417475.5_1_7:100465025-100465781:+|nuORF'] 9655 17251 AYGNVFSAF True NCI_RA007_Epitope_Rep1 974.4497820906199 974.44923496793 71.233 1 -0.07488316410888553 0.020900030202355785 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 2248 11953 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.5118349679301 51.133 1 -0.07488715921381292 0.020900030202355785 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 55783 15966 LDEHGIAAAL True PC9_epitope_Rep6 1008.5240096600398 1008.52290993586 73.713 2 -0.07490656382337606 0.020900030202355785 0.9438714419765777 ['nc|ENSG00000100241|O95248|SBF1', 'ENSG00000100241|ENST00000380817|SBF1', 'nc|ENSG00000100241|O95248-4|SBF1'] 74311 22635 NILEDLETL True PC9_epitope_Rep4 1058.54955570154 1058.5484499358602 95.293 2 -0.07494436649333348 0.020900030202355785 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1'] 96685 7181 SEPDGPGIAA True H1975_Epitope_Rep3 912.4188758851599 912.41776993586 32.596 2 -0.07498823098629342 0.020919322689109468 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 43002 11721 IGELIM[Oxidation]IKFK True NCI_RA007_Epitope_Rep1 1206.70461725474 1206.7035099358602 49.569 2 -0.07500355187412867 0.020919322689109468 0.9438714419765777 ['ENSG00000166035|ENST00000299022|LIPC'] 204 9559 AAFGGTFKKV True PC9_epitope_Rep3 1024.5705659296398 1024.56946993586 41.721 2 -0.07505318830060453 0.020973812926470884 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 7067 7063 AQVRGGYVL True NCI_RA007_Epitope_Rep3 961.5345147740899 961.53340993586 34.899 2 -0.07505833920213612 0.020973812926470884 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1'] 28431 11028 FSEENSALEY True H1975_Epitope_Rep2 1187.4982484046698 1187.49714993586 47.448 2 -0.07506421557432903 0.020973812926470884 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 89489 5105 REQPPRFAQP True H1975_Epitope_Rep2 1224.6363540736797 1224.63469490379 24.716 3 -0.07507709383783225 0.020973812926470884 0.9438714419765777 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF'] 99749 13977 SLGKQPYDLY True H1975_Epitope_Rep2 1182.5920892198599 1182.59098993586 58.909 2 -0.07508638738125237 0.020973812926470884 0.9438714419765777 ['ENSG00000102010|ENST00000348343|BMX'] 83971 6853 QELPQPQA True NCI_RA007_Epitope_Rep3 909.4555957470499 909.45448993586 34.068 2 -0.07508731738422188 0.020973812926470884 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA', 'nc|ENSG00000196531|Q13765|NACA', 'ENST00000551793.5_1_12:57108115-57119068:-|nuORF', 'ENST00000551520.1_1_12:57108340-57119068:-|nuORF'] 74455 8282 NKDDASYSL True PC9_epitope_Rep5 1011.4509042894301 1011.44980993586 36.795 2 -0.07509644983345196 0.020973812926470884 0.9438714419765777 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 117164 9867 TYSTEPNNL True PC9_epitope_Rep4 1037.46655435357 1037.46544993586 45.604 2 -0.07514214860186276 0.020973812926470884 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 121485 9032 VGKDSYVEL True NCI_RA007_Epitope_Rep3 1008.5127762699999 1008.51166993586 42.622 2 -0.07515307841542113 0.020973812926470884 0.9438714419765777 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3'] 84212 9361 QETSSIVSV True NCI_RA007_Epitope_Rep4 948.47639076128 948.47528993586 42.862 2 -0.0751809866830173 0.020973812926470884 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5'] 89706 11939 REYPNLVTI True NCI_RA007_Epitope_Rep2 1103.59750895347 1103.59640993586 51.043 2 -0.07519581695498102 0.020973812926470884 0.9438714419765777 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110'] 4751 6511 ALEEAGFK True NCI_RA007_Epitope_Rep1 863.4388830537498 863.43778993586 29.343 2 -0.07522875976547068 0.020973812926470884 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2', 'nc|ENSG00000162909|P17655-2|CAPN2', 'ENST00000487223.5_1_1:223946905-223962556:+|nuORF', 'ENST00000498027.5_1_1:223958187-223959968:+|nuORF', 'ENST00000472601.5_1_1:223957560-223960168:+|nuORF'] 41205 14699 IADEGTWTL True NCI_RA007_Epitope_Rep5 1004.48147614172 1004.48036993586 63.21 2 -0.07524078007446314 0.020973812926470884 0.9438714419765777 ['ENSG00000170584|ENST00000302764|NUDCD2'] 18006 17043 EIHSGLLEV True PC9_epitope_Rep5 995.52876068731 995.52766993586 70.574 2 -0.07524857418148423 0.020973812926470884 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF'] 129490 21329 VTEVELLLY True H1975_Epitope_Rep1 1077.5957776179698 1077.59527496793 88.604 1 -0.07527160077716039 0.02099225118244943 0.9438714419765777 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574', 'ZNF574|p.Q224Sfs*144|1|0.3|ENSG00000105732|chr19:42079275-42079275|C/-|frameshift_variant'] 47675 20449 IYPSIFHVL True PC9_epitope_Rep4 1087.60661708519 1087.6055299358602 86.801 2 -0.07529779157931862 0.02099225118244943 0.9438714419765777 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-4|SLC38A9'] 103322 14792 SQVDRLVAL True PC9_epitope_Rep4 999.5712942056298 999.5707749679301 64.836 1 -0.07530620390447089 0.02099225118244943 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 5815 6122 APFPHGDSA True PC9_epitope_Rep5 897.3980808709299 897.39698993586 28.533 2 -0.07530941857220884 0.02099225118244943 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9'] 105912 23869 SVLDLVVAL True PC9_epitope_Rep2 927.56408356687 927.56298993586 97.284 2 -0.07536131073033552 0.021007726980038634 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12', 'ENST00000479481.5_1_10:99131673-99132940:-|nuORF'] 21595 5378 ERSGVSLAA True PC9_epitope_Rep4 888.4664947839199 888.46538993586 27.413 2 -0.07538770433915389 0.021007726980038634 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3'] 118654 9463 VEAPTTLPP True H1975_Epitope_Rep2 923.4963979298699 923.49530993586 41.367 2 -0.07545884004129147 0.021007726980038634 0.9438714419765777 ['ENSG00000162231|ENST00000294172|NXF1'] 127331 11103 VQNKVVVI True NCI_RA007_Epitope_Rep4 897.5647522732098 897.56364993586 49.584 2 -0.07559487533237501 0.021007726980038634 0.9438714419765777 ['ENSG00000184544|ENST00000571134|DHRS7C', 'nc|ENSG00000184544|A6NNS2|DHRS7C'] 140291 12564 YYDKHFTEF True PC9_epitope_Rep2 1248.54513902744 1248.5440499358601 53.636 2 -0.0755978641230471 0.021007726980038634 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 117433 15167 VADPYVVIM True NCI_RA007_Epitope_Rep3 1005.5205045027299 1005.51940993586 67.178 2 -0.07561399536708166 0.021007726980038634 0.9438714419765777 ['ENSG00000071894|ENST00000616140|CPSF1'] 117738 20527 VALGALVTV True PC9_epitope_Rep4 841.52730413533 841.52620993586 87.108 2 -0.07562675029290628 0.021007726980038634 0.9438714419765777 ['ENSG00000129473|ENST00000250405|BCL2L2'] 96558 12629 SELPIVTPA True H1975_Epitope_Rep2 925.51204799401 925.51149496793 53.676 1 -0.07563730189249356 0.021007726980038634 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 24502 22836 FAISILQQL True PC9_epitope_Rep2 1031.60153170475 1031.60097496793 93.328 1 -0.07571405545701254 0.021007726980038634 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 118982 9393 VEFDSVQSA True NCI_RA007_Epitope_Rep5 980.445090633 980.44398993586 42.77 2 -0.07574266613518922 0.021007726980038634 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 53519 16186 KVPEIEVTV True PC9_epitope_Rep5 1012.5804619069999 1012.57936993586 67.248 2 -0.07574678994232338 0.021007726980038634 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 26158 9691 FHNTEVEAM True PC9_epitope_Rep3 1076.45969515132 1076.4585899358601 42.225 2 -0.07581547693649585 0.021026580011670255 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 41525 19547 IDASNIVSL True PC9_epitope_Rep2 930.5022115863001 930.5016649679301 80.57 1 -0.07583123526451462 0.021026580011670255 0.9438714419765777 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 47424 13783 IYIKQIKTF True PC9_epitope_Rep1 1152.6906810623198 1152.6890249037901 57.863 3 -0.07583324284465555 0.021026580011670255 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 4714 16655 ALDSTNVEL True PC9_epitope_Rep2 960.47639076128 960.47584496793 69.306 1 -0.07585952910348291 0.021045007343621108 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 120549 17704 VGAANLPQV True PC9_epitope_Rep4 867.4814165720699 867.4808649679301 76.123 1 -0.07588748998598834 0.021045007343621108 0.9438714419765777 ['ENST00000550513.1_1_12:53689756-53691495:+|nuORF'] 135754 8382 YELRAPVA True H1975_Epitope_Rep2 917.4970666362098 917.49596993586 37.195 2 -0.07591658016642995 0.021045007343621108 0.9438714419765777 ['ENST00000542939.1_1_12:118576827-118582605:+|nuORF', 'ENSG00000089220|ENST00000261313|PEBP1', 'C12orf51-PEBP1|1|fusion'] 2753 5634 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 26.739 2 -0.07594468262407898 0.021045007343621108 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 979 8208 AEAAVVAVA True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 36.525 1 -0.07598532002776544 0.021083973765742565 0.9438714419765777 ['ENSG00000211450|ENST00000534355|SELENOH'] 115241 23450 TVDDLAFLL True PC9_epitope_Rep5 1005.53826274185 1005.53716993586 95.185 2 -0.07599594339451937 0.021083973765742565 0.9438714419765777 ['nc|ENSG00000153093|Q9NUZ1-2|ACOXL', 'nc|ENSG00000153093|Q9NUZ1|ACOXL', 'ENSG00000153093|ENST00000439055|ACOXL'] 31693 10178 GEIGLGTPP True H1975_Epitope_Rep2 839.43888305375 839.43833496793 44.151 1 -0.07600266099208475 0.021083973765742565 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA'] 71410 18326 MILDEVHTI True PC9_epitope_Rep4 1069.54778187973 1069.54668993586 78.559 2 -0.07605847976074269 0.021098573985800197 0.9438714419765777 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3'] 26524 21619 FIVDPVSNL True PC9_epitope_Rep1 1002.53859709502 1002.53750993586 87.983 2 -0.07605916151153286 0.021098573985800197 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 130026 21643 VTPQSLFILFG True H1975_Epitope_Rep1 1220.6805103014397 1220.6794099358601 89.938 2 -0.07606972380984509 0.021098573985800197 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:807712-810823:+|nuORF'] 6432 9537 APSGNYVAC True PC9_epitope_Rep5 880.3749028981999 880.37435496793 41.644 1 -0.0761177395423824 0.021098573985800197 0.9438714419765777 ['ENSG00000114450|ENST00000232564|GNB4'] 42428 15801 IEQEGYWLP True H1975_Epitope_Rep3 1133.53932537101 1133.5387749679298 66.227 1 -0.07612169623814474 0.021098573985800197 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 88587 10968 RALKLLTTL True NCI_RA007_Epitope_Rep4 1027.67536535135 1027.6742699358601 49.056 2 -0.07612869259360881 0.021098573985800197 0.9438714419765777 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'P3H1|p.F627Lfs*4|1|0.68|ENSG00000117385|chr1:42747755-42747756|AA/-|frameshift_variant', 'ENST00000460031.5_1_1:43220834-43232642:-|nuORF', 'nc|ENSG00000117385|Q32P28-2|P3H1', 'ENST00000495874.5_1_1:43222117-43232675:-|nuORF', 'ENST00000492956.1_1_1:43227954-43232675:-|nuORF'] 113215 19717 TQDSSILPL True PC9_epitope_Rep4 972.5127762699999 972.51222496793 83.965 1 -0.07614787245256469 0.021098573985800197 0.9438714419765777 ['ENST00000560837.5_1_15:64983714-64995247:-|nuORF', 'ENSG00000180304|ENST00000326005|OAZ2'] 60530 23497 LIPEYLNFI True PC9_epitope_Rep5 1120.61684741572 1120.61627496793 95.362 1 -0.07617505284622383 0.021098573985800197 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 140815 9028 YYSPTKNEI True PC9_epitope_Rep2 1113.53423999057 1113.5331499358601 40.075 2 -0.0761995969162503 0.021098573985800197 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1'] 8501 15380 ATVLQAVSA True PC9_epitope_Rep5 858.4810822188999 858.47998993586 64.168 2 -0.0762087148216941 0.021098573985800197 0.9438714419765777 ['ENSG00000183291|ENST00000331835|SELENOF', 'ENST00000331835.9_2_1:87346375-87379803:-|nuORF', 'nc|ENSG00000183291|O60613-2|SELENOF'] 6465 9615 APTAEGLAA True PC9_epitope_Rep5 799.4075829254699 799.40703496793 41.948 1 -0.07623805734601258 0.021098573985800197 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 89474 14496 REQLLVTI True PC9_epitope_Rep4 970.5811306133398 970.58002993586 63.669 2 -0.07623918865755452 0.021098573985800197 0.9438714419765777 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'TRPM1|p.S1552Vfs*9|1|0.19|ENSG00000134160|chr15:31001980-31001980|T/-|frameshift_variant', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1', 'ENST00000558070.1_1_15:31352716-31354937:-|nuORF'] 21861 8510 ESEEGEEDAT True H1975_Epitope_Rep2 1094.3887575253398 1094.38766993586 37.689 2 -0.07628266030394035 0.021098573985800197 0.9438714419765777 ['ENSG00000089199|ENST00000378961|CHGB'] 29366 9997 FVELGTQPA True NCI_RA007_Epitope_Rep3 960.4916469025999 960.49054993586 46.414 2 -0.07631125476378581 0.021138374899436846 0.9438714419765777 ['ENSG00000158874|ENST00000367990|APOA2'] 118173 9856 VAVSGKGF True PC9_epitope_Rep5 763.4228390667898 763.42174993586 42.88 2 -0.0763191408147433 0.021155934521176045 0.9438714419765777 ['nc|ENSG00000165409|P16473-3|TSHR'] 39132 4663 HLDQSQKSLY True H1975_Epitope_Rep2 1217.60405088589 1217.6023949037901 23.033 3 -0.07632345073665407 0.021155934521176045 0.9438714419765777 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 27084 20265 FLPPDAFIHV True PC9_epitope_Rep4 1154.61243074162 1154.61132993586 86.092 2 -0.07632618592797731 0.021155934521176045 0.9438714419765777 ['ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6', 'ENSG00000130383|ENST00000588525|FUT5'] 4051 17869 AHPPLLVL True PC9_epitope_Rep4 858.53272386894 858.53162993586 76.773 2 -0.0763417231057363 0.021155934521176045 0.9438714419765777 ['nc|ENSG00000130810|Q9NQ55-2|PPAN', 'ENSG00000130810|ENST00000253107|PPAN', 'nc|ENSG00000130810|Q9NQ55-3|PPAN'] 95345 20287 SAGPEGLLGV True PC9_epitope_Rep2 898.4759968384599 898.47544496793 83.456 1 -0.07634304201882477 0.021155934521176045 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11', 'nc|ENSG00000130935|Q9H8H0-2|NOL11'] 6623 16962 APWPPKGLVPA True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 77.79 2 -0.07636782397652804 0.021155934521176045 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 75251 17634 NPLGMPVPAA True PC9_epitope_Rep6 965.5004377644899 965.49934993586 80.469 2 -0.07641035468967623 0.021173915666284612 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 27000 20192 FLLFPDMEA True NCI_RA007_Epitope_Rep4 1081.5154191222898 1081.5143299358601 87.369 2 -0.07641254561365456 0.021173915666284612 0.9438714419765777 ['nc|ENSG00000173369|P02746|C1QB', 'ENSG00000173369|ENST00000509305|C1QB'] 83298 14324 QAIEKLEEI True PC9_epitope_Rep4 1071.58119018299 1071.58008993586 62.999 2 -0.07641846131878931 0.021173915666284612 0.9438714419765777 ['ENSG00000230453|ENST00000684830|ANKRD18B', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENST00000354752.5_1_9:99922575-99942308:-|nuORF'] 74274 21321 NIIDELPPC True PC9_epitope_Rep5 1012.4899326504399 1012.4888299358599 87.066 2 -0.07642762781892416 0.021173915666284612 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 71886 5813 MPNGTPHPTA True PC9_epitope_Rep3 1021.46511488493 1021.46400993586 27.428 2 -0.07643532375538553 0.021173915666284612 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 129806 22376 VTLDLVELT True PC9_epitope_Rep1 1001.56447748969 1001.56338993586 90.885 2 -0.07652703286381086 0.021191893196075277 0.9438714419765777 ['nc|ENSG00000100150|O75140-8|DEPDC5', 'nc|ENSG00000100150|O75140-5|DEPDC5', 'nc|ENSG00000100150|O75140-1|DEPDC5', 'nc|ENSG00000100150|O75140-4|DEPDC5', 'nc|ENSG00000100150|O75140-9|DEPDC5', 'ENSG00000100150|ENST00000651528|DEPDC5', 'nc|ENSG00000100150|O75140-2|DEPDC5', 'nc|ENSG00000100150|O75140-6|DEPDC5'] 95435 11055 SALGYLHSL True NCI_RA007_Epitope_Rep4 959.5076313199099 959.50652993586 49.393 2 -0.0765734683175143 0.021191893196075277 0.9438714419765777 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000524764.1_1_6:134493798-134494280:-|nuORF', 'ENST00000477460.6_1_6:134491408-134493948:-|nuORF', 'ENST00000367855.7_1_6:134492115-134495951:-|nuORF', 'ENST00000474427.6_1_6:134493798-134493948:-|nuORF'] 128743 8333 VSPSLLEKDP True NCI_RA007_Epitope_Rep3 1083.58119018299 1083.58008993586 39.893 2 -0.07658532971346373 0.021191893196075277 0.9438714419765777 ['ENSG00000166263|ENST00000376352|STXBP4'] 126052 14337 VPAPSPLSAA True PC9_epitope_Rep1 908.4967322830399 908.49562993586 59.971 2 -0.07660371433934282 0.021191893196075277 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 134288 20755 WRSLPLLPV True PC9_epitope_Rep3 1079.64915060351 1079.6480499358602 85.103 2 -0.07662142736895382 0.021191893196075277 0.9438714419765777 ['ENST00000402802.7_1_7:536981-537197:-|nuORF'] 126694 6552 VPRPETAVA True PC9_epitope_Rep5 938.5185303567798 938.51742993586 30.175 2 -0.07671403452506897 0.02120858797040849 0.9438714419765777 ['ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 140370 15299 YYEKLHTYF True PC9_epitope_Rep5 1262.5971746003 1262.59552490379 63.857 3 -0.07672809132507581 0.02120858797040849 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 117823 13181 VANRYFTTV True PC9_epitope_Rep1 1069.55564414149 1069.5545499358602 55.564 2 -0.07679467357119185 0.02120858797040849 0.9438714419765777 ['nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1', 'ENST00000467707.1_1_9:128116999-128121864:+|nuORF', 'ENST00000474637.5_1_9:128108952-128125022:+|nuORF'] 76785 13579 NVDGHLYEL True PC9_epitope_Rep6 1058.5032742154601 1058.5021699358601 63.97 2 -0.07688295680376489 0.02120858797040849 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1', 'ENST00000510566.1_1_4:41263775-41266241:+|nuORF'] 140395 17272 YYEYNHDLF True PC9_epitope_Rep4 1262.5244035828598 1262.5233099358602 74.442 2 -0.07701287116622282 0.02120858797040849 0.9438714419765777 ['ENSG00000151748|ENST00000324679|SAV1'] 15054 3911 EAAKEALEA True H1975_Epitope_Rep3 930.4658260775799 930.46472993586 20.165 2 -0.07705729169802998 0.02120858797040849 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 33901 7512 GLYESHVGC True PC9_epitope_Rep3 963.4120166829099 963.41090993586 33.898 2 -0.07706048508350996 0.02120858797040849 0.9438714419765777 ['ENSG00000164733|ENST00000353047|CTSB'] 77589 9917 NYTARFSRF True PC9_epitope_Rep4 1160.57269118796 1160.5710449037902 45.798 3 -0.07708828138119993 0.02120858797040849 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 17235 12789 EHAKFLNSL True PC9_epitope_Rep5 1057.5556441414901 1057.5545499358602 54.204 2 -0.07712469414639037 0.021225277375783887 0.9438714419765777 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10'] 89327 8511 RELVKNWVP True NCI_RA007_Epitope_Rep5 1139.64512785223 1139.64349490379 39.422 3 -0.07714146778986963 0.021225277375783887 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 35586 12177 GTITDDVRV True PC9_epitope_Rep5 974.50327421546 974.50216993586 51.828 2 -0.07715656421564371 0.021225277375783887 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000552347.5_1_19:49119841-49120189:-|nuORF'] 38805 6549 HHYSGNNIEL True PC9_epitope_Rep6 1182.5417849825 1182.5406899358602 33.872 2 -0.07717813261253033 0.021225277375783887 0.9438714419765777 ['ENSG00000156482|ENST00000287038|RPL30'] 6746 16659 AQEALTVLSLA True H1975_Epitope_Rep1 1114.62338934814 1114.6222899358602 69.469 2 -0.0772186599675672 0.021225277375783887 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A'] 1637 7422 AEFYALKG True H1975_Epitope_Rep2 897.4596184983299 897.45852993586 33.492 2 -0.07722207774447704 0.021225277375783887 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 109801 7268 THIVGTEV True PC9_epitope_Rep2 854.4497820906199 854.44868993586 33.344 2 -0.07724824508956969 0.021225277375783887 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 116221 20438 TVTSVLTSV True PC9_epitope_Rep4 905.50696261357 905.50586993586 86.762 2 -0.07727738800454505 0.021225277375783887 0.9438714419765777 ['ENSG00000106689|ENST00000373615|LHX2'] 102199 11467 SPSLSPLAA True H1975_Epitope_Rep3 841.4545331178899 841.4539849679301 49.229 1 -0.07731347560887063 0.021244950053263118 0.9438714419765777 ['ENSG00000166341|ENST00000299441|DCHS1'] 72444 4551 [Acetylation]-M[Oxidation]TM[Oxidation]DKSELVQK True H1975_Epitope_Rep3 1382.64215391756 1382.64104993586 22.626 2 -0.07738701343312814 0.021263339831581487 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB'] 84808 15142 QHITLPVSV True PC9_epitope_Rep6 992.5654805492 992.56438993586 70.309 2 -0.07740456531089568 0.021263339831581487 0.9438714419765777 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5', 'NFAT5|p.L1061Ffs*35|2|0.25|ENSG00000102908|chr16:69693055-69693056|-/T|frameshift_variant'] 27936 13929 FQPPGPQAV True PC9_epitope_Rep4 939.4814165720697 939.48030993586 61.482 2 -0.07740781726511488 0.021263339831581487 0.9438714419765777 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 34697 16001 GQLSLYNIL True NCI_RA007_Epitope_Rep3 1019.56514619603 1019.56404993586 70.617 2 -0.07754692875646797 0.021263339831581487 0.9438714419765777 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'ENST00000401554.5_1_4:38112345-38138953:+|nuORF', 'ENST00000407365.5_1_4:38113700-38138953:+|nuORF'] 70197 24246 LYLPFSLTF True PC9_epitope_Rep5 1099.59538369515 1099.5942899358602 98.271 2 -0.07755057916196949 0.021282582045459113 0.9438714419765777 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 74310 23645 NILEDLETL True PC9_epitope_Rep1 1058.54955570154 1058.5484499358602 95.74 2 -0.07757664518828646 0.021282582045459113 0.9438714419765777 ['ENSG00000095139|ENST00000264028|ARCN1'] 72464 21348 MTVDDLLSL True PC9_epitope_Rep6 1005.5052483614099 1005.50414993586 94.988 2 -0.07759423192437546 0.021301822712566067 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 125191 16036 VLQGAVPTV True PC9_epitope_Rep2 882.51746772762 882.51636993586 66.938 2 -0.07762183564053267 0.021301822712566067 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 47849 12659 IYTFPHSAF True NCI_RA007_Epitope_Rep5 1081.5232813840498 1081.52218993586 55.348 2 -0.07769350640568534 0.02131849143040849 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000377662.6_1_6:26431111-26431840:+|nuORF'] 115165 15028 TVAGKSILTNI True PC9_epitope_Rep2 1115.65502382959 1115.65392993586 63.062 2 -0.07773104301474833 0.02131849143040849 0.9438714419765777 ['ENSG00000198691|ENST00000370225|ABCA4'] 53531 17689 KVPEWVDTV True PC9_epitope_Rep3 1071.5600608155898 1071.5589699358602 73.237 2 -0.07773433352828193 0.02131849143040849 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 89322 8328 RELVKNWVP True NCI_RA007_Epitope_Rep3 1139.64512785223 1139.64349490379 39.874 3 -0.07773749225126735 0.02131849143040849 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 83999 2703 QEMQEVQSSR True PC9_epitope_Rep1 1220.5455500336 1220.54444993586 14.816 2 -0.0778003190985233 0.02131849143040849 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 21425 17157 ERNRYFISL True PC9_epitope_Rep1 1196.6302060640799 1196.62855490379 70.815 3 -0.07780629846309507 0.02131849143040849 0.9438714419765777 ['ENSG00000163481|ENST00000295704|RNF25'] 108420 8512 TEEENYNVVA True H1975_Epitope_Rep2 1166.50914744154 1166.50804993586 37.696 2 -0.07784254360004927 0.02131849143040849 0.9438714419765777 ['nc|ENSG00000184178|Q8WU76-2|SCFD2', 'ENSG00000184178|ENST00000401642|SCFD2'] 137853 11292 YPIEHGIITN True PC9_epitope_Rep2 1155.5924235730297 1155.5913299358601 48.758 2 -0.07797519374087582 0.02131849143040849 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 102090 8750 SPPVPGPSA True PC9_epitope_Rep1 807.41266830591 807.41156993586 38.495 2 -0.078046062289741 0.02133729807924134 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 94878 7657 RYNPRTNQW True PC9_epitope_Rep5 1233.60030291813 1233.59866490379 34.398 3 -0.07806738105014197 0.02133729807924134 0.9438714419765777 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 118570 19643 VEAAIALQV True PC9_epitope_Rep2 912.5280324113199 912.52692993586 80.942 2 -0.07809474525751398 0.02133729807924134 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000451446.1_1_13:24697062-24697869:-|nuORF'] 68255 15897 LTREACLSI True PC9_epitope_Rep2 1004.5324661687599 1004.53136993586 66.402 2 -0.07812362741199433 0.021356960601129127 0.9438714419765777 ['ENSG00000104356|ENST00000401707|POP1'] 110016 11226 THTTPVLL True PC9_epitope_Rep2 880.5018176634799 880.50072993586 48.509 2 -0.07814357927285526 0.021376192867905576 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 44884 8187 IQDDAVHTL True PC9_epitope_Rep6 1010.50327421546 1010.50216993586 41.053 2 -0.07814461324992195 0.021376192867905576 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 107242 10762 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 46.351 3 -0.07818899459171252 0.02139585342333655 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 34878 7788 GQVPPGESV True PC9_epitope_Rep1 868.42904664604 868.4279499358599 34.78 2 -0.07826542333716824 0.021415082968379604 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 70861 5357 MEGKVPVAA True H1975_Epitope_Rep3 900.4738886634798 900.47278993586 25.671 2 -0.07834822975634961 0.021415082968379604 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 68701 13611 LVDDPLEY True H1975_Epitope_Rep1 962.4596780679799 962.45858993586 57.486 2 -0.07837330470732706 0.021451813762905236 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 121113 15863 VGGDTKDLLL True PC9_epitope_Rep4 1029.57062549929 1029.5695299358601 68.948 2 -0.07841048631967266 0.021451813762905236 0.9438714419765777 ['ENST00000493287.5_1_1:1337440-1337563:-|nuORF'] 23252 7387 EVRKEGVAV True PC9_epitope_Rep2 985.5556441414898 985.55454993586 33.794 2 -0.07843724220966189 0.021451813762905236 0.9438714419765777 ['ENST00000441302.6_1_3:39139332-39139530:-|nuORF'] 26323 21726 FIEVVGFII True PC9_epitope_Rep6 1035.6004690755897 1035.59936993586 96.456 2 -0.07844212143903245 0.021451813762905236 0.9438714419765777 ['ENSG00000147145|ENST00000614823|LPAR4'] 133026 11295 VYVQNVVKL True NCI_RA007_Epitope_Rep2 1060.6280808057597 1060.6269899358601 48.523 2 -0.07846683114246125 0.021451813762905236 0.9438714419765777 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1'] 136761 19939 YIPTELDQV True PC9_epitope_Rep3 1076.53899101784 1076.53847496793 81.938 1 -0.07853678886438793 0.021451813762905236 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 125987 10078 VPAGGAVAVSA True PC9_epitope_Rep2 897.4919812557699 897.4914349679301 44.096 1 -0.07853756353931234 0.021451813762905236 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 31484 12630 GEELSPPLP True H1975_Epitope_Rep3 937.4756624852898 937.47456993586 53.787 2 -0.07862568038088336 0.021451813762905236 0.9438714419765777 ['ENST00000359314.5_1_6:47445732-47445798:+|nuORF'] 86808 11470 QRNPQGFVL True PC9_epitope_Rep6 1057.5668775315298 1057.56578993586 55.187 2 -0.0786383683227372 0.02148939588688946 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7'] 131878 18472 VYDPTTNAW True PC9_epitope_Rep5 1065.4767251144501 1065.47562993586 76.074 2 -0.07864353559321408 0.02148939588688946 0.9438714419765777 ['nc|ENSG00000109466|O95198-3|KLHL2', 'ENSG00000109466|ENST00000226725|KLHL2', 'nc|ENSG00000109466|O95198-2|KLHL2'] 37636 5624 HADEHRLKYQC True H1975_Epitope_Rep1 1398.64626713438 1398.6451699358602 26.7 2 -0.07868282983694218 0.02148939588688946 0.9438714419765777 ['ENSG00000198018|ENST00000370489|ENTPD7'] 57925 7410 LEQLREKP True H1975_Epitope_Rep3 1011.5712942056299 1011.57018993586 33.48 2 -0.07870097282958793 0.02148939588688946 0.9438714419765777 ['nc|ENSG00000162398|Q3ZCV2-2|CIMAP2', 'ENSG00000162398|ENST00000371273|LEXM'] 72473 16795 MVADKFTEL True PC9_epitope_Rep1 1052.52123277872 1052.52012993586 69.427 2 -0.07870160702806991 0.02148939588688946 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 977 8298 AEAAVVAVA True H1975_Epitope_Rep1 799.4439684341899 799.44341496793 36.85 1 -0.07871594488421231 0.02148939588688946 0.9438714419765777 ['ENSG00000211450|ENST00000534355|SELENOH'] 5927 12809 APHPPLSVV True PC9_epitope_Rep5 915.51780208079 915.51670993586 54.281 2 -0.07875643292237414 0.021508183552565518 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 101617 16961 SPFGSITSA True PC9_epitope_Rep1 865.4181476091701 865.41704993586 70.063 2 -0.07880311749222386 0.021508183552565518 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 19564 14893 ELRARQLEL True PC9_epitope_Rep3 1126.64585612822 1126.64422490379 62.422 3 -0.07882840787659512 0.021508183552565518 0.9438714419765777 ['ENST00000557266.5_1_15:91500194-91504996:+|nuORF', 'ENSG00000166965|ENST00000394258|RCCD1', 'ENST00000555737.5_1_15:91500194-91503934:+|nuORF'] 46263 15768 ITDVIIGFQ True H1975_Epitope_Rep3 1004.5542471591598 1004.55314993586 66.1 2 -0.07883680053064471 0.021526968954576488 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 1873 13486 AEIGSMFTA True H1975_Epitope_Rep2 925.42151873745 925.4209649679301 57.006 1 -0.07885457511757478 0.021526968954576488 0.9438714419765777 ['ENST00000548443.2_14:19856929-19857043:-|nuORF'] 45903 12468 ISRGTTEIL True PC9_epitope_Rep2 988.55530978832 988.55420993586 53.269 2 -0.07887625504885966 0.021526968954576488 0.9438714419765777 ['ENST00000459899.1_1_14:35857513-35858113:-|nuORF'] 140115 22143 YVPPELITL True PC9_epitope_Rep5 1043.59029831471 1043.58977496793 90.21 1 -0.07893475541707028 0.02154661740195586 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 31631 4784 GEGSPPAVA True H1975_Epitope_Rep2 783.3762827971899 783.37573496793 23.49 1 -0.07895453689881396 0.021566265060240963 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17'] 1825 11943 AEIEDPPIP True H1975_Epitope_Rep1 979.4862271689899 979.48512993586 50.943 2 -0.07895742961119524 0.021585478494839563 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 70634 4889 MAQTDPETND True PC9_epitope_Rep1 1120.43426824912 1120.4331699358602 23.671 2 -0.07897364031010594 0.021585478494839563 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 86624 7156 QREAEQSNVAL True PC9_epitope_Rep1 1243.61567819875 1243.61458993586 32.336 2 -0.0789964405847959 0.021605124189305866 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 132930 20055 VYTVVDEMF True PC9_epitope_Rep6 1101.5052483614097 1101.50467496793 89.808 1 -0.07911109649073825 0.021619993977717553 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 102504 20981 SPYLLSPTF True PC9_epitope_Rep4 1023.52769805815 1023.5266099358599 88.864 2 -0.07911387454560687 0.021619993977717553 0.9438714419765777 ['ENST00000420027.3_1_20:48698513-48698663:-|nuORF'] 6252 5671 APRLQSEVA True PC9_epitope_Rep4 969.5243440132099 969.52324993586 28.621 2 -0.07911446165659211 0.021619993977717553 0.9438714419765777 ['nc|ENSG00000182149|P53990-2|IST1', 'nc|ENSG00000182149|P53990|IST1', 'ENSG00000182149|ENST00000378799|IST1', 'nc|ENSG00000182149|P53990-5|IST1', 'ENST00000587765.1_1_19:38282509-38282806:+|nuORF', 'ENST00000545518.1_1_16:71950471-71955437:+|nuORF', 'nc|ENSG00000182149|P53990-3|IST1'] 16009 8735 EEAENTLQSFR True NCI_RA007_Epitope_Rep2 1322.61025846514 1322.60967496793 38.624 1 -0.07915932932596222 0.021619993977717553 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 107706 16933 TALLKIEGV True PC9_epitope_Rep2 942.57498260374 942.57388993586 70.375 2 -0.07917541454124144 0.021619993977717553 0.9438714419765777 ['ENST00000329092.12_1_3:197677808-197679492:+|nuORF', 'ENSG00000182899|ENST00000647248|RPL35A', 'ENST00000485439.5_1_3:197677808-197681048:+|nuORF', 'ENST00000478069.1_1_4:95290987-95291311:+|nuORF'] 116612 21527 TYGPSFPAF True PC9_epitope_Rep3 985.4545331178899 985.4539849679301 88.098 1 -0.07918858526983574 0.021619993977717553 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'RALGAPB|p.V262F|1|0.49|ENSG00000170471|chr20:38509120-38509120|G/T|missense_variant'] 72476 16878 MVADKFTEL True PC9_epitope_Rep3 1052.52123277872 1052.52012993586 70.077 2 -0.07919209148699109 0.021619993977717553 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 62187 17539 LLPNHSYVF True PC9_epitope_Rep1 1088.5654805492 1088.5643899358602 72.258 2 -0.07921193532419912 0.021619993977717553 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 5889 14852 APGSGTFPLG True PC9_epitope_Rep4 902.4497820906199 902.44868993586 65.067 2 -0.07923575837465319 0.021619993977717553 0.9438714419765777 ['ENST00000336576.9_2_2:220151153-220151270:+|nuORF'] 83285 17990 QAFVIFKEV True PC9_epitope_Rep6 1079.60153170475 1079.6004299358601 81.826 2 -0.07929242567619241 0.021619993977717553 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF'] 47257 21832 IYEPNFIFF True NCI_RA007_Epitope_Rep1 1188.5855472874398 1188.5844499358602 89.376 2 -0.07929814154851962 0.021619993977717553 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 46320 22689 ITFDEIVNI True PC9_epitope_Rep2 1062.55972646242 1062.5586299358602 92.767 2 -0.0793117176465952 0.021619993977717553 0.9438714419765777 ['ENSG00000197958|ENST00000361436|RPL12', 'nc|ENSG00000197958|P30050-2|RPL12'] 118227 17999 VAYLDPLEL True NCI_RA007_Epitope_Rep3 1031.5539128059897 1031.55337496793 78.865 1 -0.07941078921156978 0.02171949334564506 0.9438714419765777 ['ENSG00000187244|ENST00000270233|BCAM'] 43242 12958 IHDFQPHVI True PC9_epitope_Rep1 1104.5716285588 1104.5705299358601 54.715 2 -0.07944766693290582 0.02171949334564506 0.9438714419765777 ['nc|ENSG00000038274|Q9NZL9-4|MAT2B', 'nc|ENSG00000038274|Q9NZL9-2|MAT2B', 'ENSG00000038274|ENST00000321757|MAT2B', 'nc|ENSG00000038274|Q9NZL9-3|MAT2B'] 91196 7350 RLQPSSLTSV True PC9_epitope_Rep6 1086.6033226099 1086.6022299358601 37.449 2 -0.07951521088793038 0.021739130434782608 0.9438714419765777 ['nc|ENSG00000172113|O75414-3|NME6'] 109988 11078 THSPYVAQI True PC9_epitope_Rep5 1014.51344497634 1014.51234993586 47.602 2 -0.07955795967302325 0.021756146512794783 0.9438714419765777 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1'] 61582 19819 LLGPPPVGV True PC9_epitope_Rep5 847.51673945163 847.51619496793 81.282 1 -0.07956163257206875 0.021756146512794783 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 58466 4652 LEYGDNAEK True PC9_epitope_Rep3 1037.4665543535698 1037.46544993586 22.987 2 -0.07957080940311836 0.021756146512794783 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000507713.1_1_5:94775848-94776172:+|nuORF'] 96265 16547 SEEPWTVLP True H1975_Epitope_Rep2 1056.51277627 1056.51227496793 68.873 1 -0.07963220737613462 0.021756146512794783 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF', 'ENST00000540847.6_1_18:13088862-13124766:+|nuORF'] 13226 7672 DLTREGGSIP True NCI_RA007_Epitope_Rep3 1043.5247379360299 1043.52364993586 37.297 2 -0.07964368624026777 0.021756146512794783 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2'] 54290 8156 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 40.916 3 -0.07970054387868847 0.021756146512794783 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 94896 5008 RYPDNLKHL True PC9_epitope_Rep6 1154.61964138038 1154.61799490379 26.883 3 -0.07971569438012292 0.021756146512794783 0.9438714419765777 ['ENST00000552606.1_1_12:82750710-82752155:-|nuORF', 'ENSG00000133773|ENST00000256151|CCDC59', 'CCDC59|p.Y97H|1|0.11|ENSG00000133773|chr12:82357135-82357135|A/G|missense_variant', 'ENST00000406807.2_1_6:149812705-149813218:-|nuORF'] 84540 14330 QHAEPWVV True PC9_epitope_Rep3 964.4766655447999 964.47556993586 60.206 2 -0.0797205459840714 0.021775342685692495 0.9438714419765777 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7'] 70017 15604 LYGKIAEAF True PC9_epitope_Rep4 1010.5436824754598 1010.5431749679301 67.945 1 -0.07972358053434962 0.021775342685692495 0.9438714419765777 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 139757 12036 YVADLVHSA True PC9_epitope_Rep3 973.4868958753299 973.48578993586 51.331 2 -0.07976389542869732 0.021794099939795305 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 43093 13748 IGLKASDFLP True H1975_Epitope_Rep2 1059.59644632431 1059.5953499358602 58.027 2 -0.07976647993084582 0.021794099939795305 0.9438714419765777 ['ENSG00000140854|ENST00000379661|KATNB1', 'ENST00000566611.5_1_16:57786940-57790081:+|nuORF'] 55684 9155 LDCAHTAASF True PC9_epitope_Rep4 1034.44913046762 1034.4480299358602 42.808 2 -0.07977979730801081 0.021794099939795305 0.9438714419765777 ['ENST00000336812.4_1_4:24586045-24586090:-|nuORF'] 87335 9372 QTAQIFFTK True NCI_RA007_Epitope_Rep3 1082.5760452328998 1082.57494993586 43.956 2 -0.07981426092802 0.021813292663348853 0.9438714419765777 ['ENSG00000167778|ENST00000301463|SPRYD3'] 25808 20843 FGANAILGV True PC9_epitope_Rep2 860.4756029156399 860.4745099358599 85.618 2 -0.07981584629535571 0.021813292663348853 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 14445 10875 DTNADKQLSF True PC9_epitope_Rep6 1137.53021723929 1137.52912993586 52.693 2 -0.07985205760940564 0.02183204575097823 0.9438714419765777 ['ENSG00000163220|ENST00000368738|S100A9'] 109358 12853 TGIQPGTSL True PC9_epitope_Rep2 872.46034677432 872.45924993586 54.739 2 -0.07987561610902649 0.02183204575097823 0.9438714419765777 ['ENSG00000173653|ENST00000309657|RCE1', 'ENST00000533277.5_1_11:66611269-66612734:+|nuORF'] 113341 8914 TQKSLSLSLG True NCI_RA007_Epitope_Rep5 1032.5815245361598 1032.5804299358601 40.95 2 -0.0798883386273211 0.02183204575097823 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4'] 113488 15050 TQSELATAL True PC9_epitope_Rep2 932.4814761417199 932.48092496793 63.148 1 -0.08001707406903717 0.021870422761291357 0.9438714419765777 ['ENSG00000138629|ENST00000395081|UBL7'] 94557 10249 RYIPTAAAF True NCI_RA007_Epitope_Rep4 1008.5392658013599 1008.5386749679301 46.277 1 -0.08005985104363492 0.021870422761291357 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 33313 5692 GLDEGALR True NCI_RA007_Epitope_Rep1 829.4293809992099 829.42828993586 26.2 2 -0.0800704691216543 0.021870422761291357 0.9438714419765777 ['nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN', 'ENST00000482444.5_2_22:31477435-31483924:+|nuORF', 'ENST00000497697.5_1_22:31477435-31484100:+|nuORF', 'ENST00000475548.5_1_22:31477435-31484563:+|nuORF'] 126449 14395 VPLRFPAGSAA True PC9_epitope_Rep3 1084.6029286870798 1084.60182993586 60.465 2 -0.08007913348349023 0.021870422761291357 0.9438714419765777 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 47573 5184 IYNEIAGK True NCI_RA007_Epitope_Rep5 906.4810822188999 906.47998993586 26.634 2 -0.08019369788530982 0.021910112359550562 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 130581 5823 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 27.791 2 -0.08024041405156235 0.021945837512537612 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 105115 16268 STLPDVTEV True PC9_epitope_Rep6 959.48114178855 959.48004993586 74.938 2 -0.08027194395940784 0.021945837512537612 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 31670 14338 GEIASGFWQA True NCI_RA007_Epitope_Rep3 1064.49270953176 1064.4916099358602 63.714 2 -0.08028701546363208 0.021945837512537612 0.9438714419765777 ['ENSG00000145685|ENST00000380345|LHFPL2'] 6737 6089 AQDGAHVVV True PC9_epitope_Rep1 894.4559301002199 894.45482993586 28.235 2 -0.08029128130287161 0.021945837512537612 0.9438714419765777 ['nc|ENSG00000285467|P0CG22|DHRS4L1', 'ENST00000558682.1_1_14:24505709-24507249:+|nuORF', 'nc|ENSG00000157326|Q9BTZ2-3|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-7|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-2|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-5|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-8|DHRS4', 'nc|ENSG00000157326|Q9BTZ2-4|DHRS4', 'ENSG00000157326|ENST00000313250|DHRS4'] 28667 14825 FSSPPVIL True H1975_Epitope_Rep3 858.4851049701799 858.4845549679301 62.405 1 -0.08038360744875767 0.021945837512537612 0.9438714419765777 ['ENSG00000171867|ENST00000379440|PRNP'] 126620 6251 VPPSFIRK True H1975_Epitope_Rep1 942.5650866263799 942.56398993586 29.113 2 -0.08038797953189733 0.021945837512537612 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 38844 13276 HIGDAVVI True PC9_epitope_Rep3 822.4599528515 822.45884993586 56.101 2 -0.08040694735882578 0.021945837512537612 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 107248 8320 SYPRRFSTL True PC9_epitope_Rep4 1125.59309227937 1125.59198993586 39.461 2 -0.08042109085022946 0.021945837512537612 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 27709 18342 FQDPSVTQL True PC9_epitope_Rep2 1033.50802524273 1033.50747496793 75.882 1 -0.08042834168128098 0.021945837512537612 0.9438714419765777 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000563829.5_1_15:75146292-75165596:-|nuORF'] 32097 8526 GEYGGWYKA True NCI_RA007_Epitope_Rep3 1029.45559574705 1029.45448993586 40.609 2 -0.08048876618807181 0.021945837512537612 0.9438714419765777 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 26210 7678 FHTTPNTSL True PC9_epitope_Rep6 1016.49270953176 1016.49160993586 38.86 2 -0.08052562065311929 0.02196501644868812 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1'] 40851 10266 HVLGPDLKSV True PC9_epitope_Rep2 1063.60259433391 1063.6014899358602 44.821 2 -0.08054519689814896 0.02196501644868812 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 116541 10661 TYETKTALL True PC9_epitope_Rep4 1038.5597264624198 1038.5586299358602 48.756 2 -0.08057256687676619 0.02198198920957099 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 97542 7345 SGTVDPQELQK True PC9_epitope_Rep1 1200.59863115228 1200.5975299358602 33.064 2 -0.08057716117856427 0.02198198920957099 0.9438714419765777 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF', 'ENST00000472930.6_1_7:87835795-87839460:-|nuORF'] 78991 14217 PFLGAPAAT True PC9_epitope_Rep2 843.44905381463 843.44794993586 59.952 2 -0.0805874042832155 0.02198198920957099 0.9438714419765777 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 85983 9686 QPGLYTVS True H1975_Epitope_Rep3 863.43888305375 863.43833496793 42.277 1 -0.08060082801864862 0.02198198920957099 0.9438714419765777 ['ENSG00000135605|ENST00000381501|TEC'] 74666 12542 NLGSVVLQLK True NCI_RA007_Epitope_Rep1 1069.6495445263297 1069.64844993586 52.765 2 -0.08065948342674836 0.02198198920957099 0.9438714419765777 ['ENSG00000109606|ENST00000336812|DHX15', 'ENST00000503562.1_1_4:24541566-24543501:-|nuORF'] 113739 7005 TRDGVLKL True PC9_epitope_Rep4 900.5392658013599 900.53816993586 34.192 2 -0.08072663206254634 0.02198198920957099 0.9438714419765777 ['nc|ENSG00000136807|P50750-2|CDK9', 'ENSG00000136807|ENST00000373264|CDK9'] 77329 14804 NYKKFYEQF True PC9_epitope_Rep5 1265.6080736371698 1265.60641490379 61.943 3 -0.08072849758935988 0.02198198920957099 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 128447 18471 VSEPRYFQL True PC9_epitope_Rep1 1137.5818588893299 1137.5807699358602 75.841 2 -0.08075960585151018 0.02200160449257922 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF', 'ENST00000478389.5_1_20:57566845-57568278:+|nuORF'] 4006 14970 AHGVSLVL True PC9_epitope_Rep3 794.46503823194 794.46394993586 62.713 2 -0.08080346501177105 0.022019894111984597 0.9438714419765777 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 107050 15871 SYLPLAHMF True NCI_RA007_Epitope_Rep4 1077.53173789277 1077.53064993586 68.916 2 -0.08083286511471569 0.022019894111984597 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'nc|ENSG00000164398|Q9UKU0-2|ACSL6', 'nc|ENSG00000164398|Q9UKU0-3|ACSL6', 'nc|ENSG00000164398|Q9UKU0-8|ACSL6'] 14647 9829 DVNAAIATIK True NCI_RA007_Epitope_Rep1 1014.57095985246 1014.5703749679301 42.236 1 -0.08087251231686096 0.022019894111984597 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000167553|ENST00000301072|TUBA1C'] 3424 10862 AGLAKSIGV True PC9_epitope_Rep1 814.4912529797799 814.49014993586 46.667 2 -0.08090750104306162 0.022019894111984597 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|250|16.96|0.18|6.55|+|ENST00000602997|AKR1C3,AKR1C3', 'ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|317|31.41|0.67|5.55|+|ENST00000380859|AKR1C1,AKR1C1', 'chr10:4963893-4965914|317|27.99|0.97|4.85|+|ENST00000380859|AKR1C1,AKR1C1'] 38083 14228 HENILGFIA True H1975_Epitope_Rep1 1012.5341804209199 1012.53308993586 59.907 2 -0.08095894016316166 0.02203950666800361 0.9438714419765777 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000135503|P36896-2|ACVR1B', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-3|ACVR1B', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant'] 130592 5250 VVAAHLAGA True PC9_epitope_Rep6 807.46028720467 807.45918993586 27.979 2 -0.08100334399122985 0.022077401243232403 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 59958 16717 LHLYLSHSIF True PC9_epitope_Rep4 1228.6604435632 1228.65880490379 72.271 3 -0.08104850062581823 0.022077401243232403 0.9438714419765777 ['ENST00000592643.5_1_17:73774540-73774585:-|nuORF'] 32230 17845 GFGGDFDG True PC9_epitope_Rep5 770.28713343962 770.28658496793 73.66 1 -0.08107846981802011 0.022077401243232403 0.9438714419765777 ['ENSG00000015413|ENST00000690203|DPEP1'] 63171 9476 LNSVVQSV True PC9_epitope_Rep1 844.4654321547599 844.4648849679301 41.307 1 -0.0810875010180075 0.022077401243232403 0.9438714419765777 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 23235 13025 EVRAQYEEI True PC9_epitope_Rep2 1135.5509526838698 1135.54984993586 55.381 2 -0.08110783815256742 0.022077401243232403 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013', 'CON__Q9R0H5'] 14758 8034 DVWQRFRRKST True NCI_RA007_Epitope_Rep1 1477.7902289461294 1477.78858490379 35.248 3 -0.08124570113237974 0.022116175084715178 0.9438714419765777 ['ENSG00000117834|ENST00000438567|SLC5A9', 'nc|ENSG00000117834|Q2M3M2-3|SLC5A9', 'nc|ENSG00000117834|Q2M3M2-2|SLC5A9'] 107925 11975 TAVTVNQSL True PC9_epitope_Rep2 931.4974605590301 931.49691496793 51.381 1 -0.081246380103504 0.022116175084715178 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 6931 22156 AQLGGVLLL True PC9_epitope_Rep2 882.5538532363399 882.55274993586 90.709 2 -0.08124926667289954 0.022116175084715178 0.9438714419765777 ['nc|ENSG00000237515|B4DS77-3|SHISA9', 'ENSG00000237515|ENST00000558583|SHISA9'] 138930 13914 YSEEIVEMY True H1975_Epitope_Rep1 1161.4899922200898 1161.48947496793 58.672 1 -0.08130689859562361 0.022175438596491227 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 2752 5531 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 26.339 2 -0.08134769604472335 0.022175438596491227 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 128630 18750 VSLESVEGV True PC9_epitope_Rep4 917.4705771048499 917.46948993586 80.205 2 -0.0813802523172853 0.022214648034164043 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'TTN|p.H3057Ifs*2|2|0.16|ENSG00000155657|chr2:178768151-178768151|A/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 28668 17873 FSSPPVILL True H1975_Epitope_Rep1 971.5691689473099 971.5686249679301 74.439 1 -0.08139663960310288 0.022214648034164043 0.9438714419765777 ['ENSG00000171867|ENST00000379440|PRNP'] 108854 4816 TERFGQGGAGP True NCI_RA007_Epitope_Rep4 1075.5046711977898 1075.50356993586 24.958 2 -0.08151562488594333 0.022291269920817883 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ'] 85722 17166 QLSQVEILK True H1975_Epitope_Rep1 1056.6179100448799 1056.61737496793 71.48 1 -0.08157038066600798 0.022291269920817883 0.9438714419765777 ['ID3|p.Q71K|1|0.16|ENSG00000117318|chr1:23559216-23559216|G/T|missense_variant'] 79230 8506 PGGGGSLPAG True PC9_epitope_Rep1 768.37661715036 768.37552993586 37.554 2 -0.08159178187201066 0.022291269920817883 0.9438714419765777 ['ENST00000331457.8_1_22:31795578-31795629:+|nuORF'] 45407 17613 ISDRTDALLL True PC9_epitope_Rep4 1115.6186383208699 1115.61754993586 75.766 2 -0.08162913462012597 0.022291269920817883 0.9438714419765777 ['ENSG00000142197|ENST00000691173|DOP1B', 'nc|ENSG00000142197|Q9Y3R5-2|DOP1B'] 39108 15806 HLDATKLLL True PC9_epitope_Rep4 1022.61243074162 1022.61132993586 68.721 2 -0.08163355263182567 0.022291269920817883 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 107943 15278 TAYDNFVEL True NCI_RA007_Epitope_Rep4 1070.49204082542 1070.49094993586 66.414 2 -0.08165618224203601 0.022291269920817883 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 31800 12212 GEMEPPALP True H1975_Epitope_Rep2 939.4371688015898 939.43661496793 52.056 1 -0.0817172976407131 0.022291269920817883 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 132603 13765 VYPQPGMQRF True PC9_epitope_Rep1 1221.5964634076497 1221.5953699358602 57.792 2 -0.08173217598923753 0.022291269920817883 0.9438714419765777 ['ENSG00000151929|ENST00000369085|BAG3'] 103803 15014 SRGDFVVEY True PC9_epitope_Rep5 1070.50327421546 1070.50277496793 62.754 1 -0.08175817983834002 0.022308185681071114 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 1220 14970 AEDGFFVPP True H1975_Epitope_Rep1 977.4494477374499 977.4488949679301 62.825 1 -0.08184036188789982 0.022308185681071114 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 44832 19007 IPVYSPLSA True PC9_epitope_Rep4 945.5171333744499 945.51602993586 81.201 2 -0.08187525009511652 0.022308185681071114 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000529186.1_1_11:44129577-44137613:+|nuORF', 'EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion'] 84157 8064 QERFTQDTQP True H1975_Epitope_Rep3 1248.5734790335998 1248.57184490379 35.992 3 -0.08189220915659741 0.022308185681071114 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 7838 2613 ATAGIIGVNRK True NCI_RA007_Epitope_Rep3 1098.65094150866 1098.6498499358602 14.743 2 -0.08195015447077611 0.022308185681071114 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 7542 11839 ASFGMEVTAP True H1975_Epitope_Rep2 1008.45863252216 1008.45752993586 50.614 2 -0.08195538845063917 0.022308185681071114 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 116255 19507 TVVATVLAT True PC9_epitope_Rep1 873.5171333744499 873.51602993586 79.852 2 -0.08195946186130783 0.022308185681071114 0.9438714419765777 ['ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7'] 63373 19079 LPFISYPQI True NCI_RA007_Epitope_Rep3 1076.5906326678798 1076.5895299358601 83.341 2 -0.08197577831861515 0.022327333947969697 0.9438714419765777 ['ENST00000482658.1_1_2:102626076-102632522:+|nuORF', 'nc|ENSG00000115590|P27930-2|IL1R2', 'ENSG00000115590|ENST00000332549|IL1R2'] 102089 8646 SPPVPGPSA True PC9_epitope_Rep1 807.41266830591 807.41156993586 38.095 2 -0.08199626842692315 0.022327333947969697 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 102173 4720 SPRTDPYSA True PC9_epitope_Rep1 992.4563240230399 992.45522993586 23.025 2 -0.08206107913696574 0.022345137177097737 0.9438714419765777 ['ENSG00000043355|ENST00000376335|ZIC2'] 27066 16738 FLPDSTQTL True NCI_RA007_Epitope_Rep1 1020.51277627 1020.51166993586 69.232 2 -0.08206346243614217 0.022345137177097737 0.9438714419765777 ['MAN1A2|p.S61Tfs*5|2|0.2|ENSG00000198162|chr1:117368363-117368367|TTCAA/-|frameshift_variant'] 76184 5505 NRSSVEVRM True PC9_epitope_Rep5 1076.53967680752 1076.53856993586 26.183 2 -0.0821032683936119 0.022345137177097737 0.9438714419765777 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 1670 8046 AEGLEPPAA True H1975_Epitope_Rep2 853.4181476091699 853.4175949679301 35.9 1 -0.08211041332883258 0.022345137177097737 0.9438714419765777 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 34478 18046 GQDGLYIGV True PC9_epitope_Rep6 920.4603467743199 920.45924993586 82.045 2 -0.0821674522730297 0.022345137177097737 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 132938 19202 VYTVVDEMFL True NCI_RA007_Epitope_Rep4 1214.5893123385397 1214.58820993586 83.02 2 -0.08225900508644975 0.02240436063405543 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 130585 6805 VVAAHLAGA True PC9_epitope_Rep3 807.46028720467 807.45918993586 31.192 2 -0.0822755564770732 0.02240436063405543 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 139873 14805 YVDPVNKVL True PC9_epitope_Rep2 1045.58079626017 1045.5796899358602 62.212 2 -0.08235393642690102 0.022423052260339853 0.9438714419765777 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 104784 12633 STDPLDAGVDY True H1975_Epitope_Rep3 1151.4982484046698 1151.49714993586 53.798 2 -0.082368135196899 0.022423052260339853 0.9438714419765777 ['ENSG00000139645|ENST00000267116|ANKRD52'] 15272 17388 EAGTYSLNV True PC9_epitope_Rep3 952.4501760134399 952.44906993586 72.053 2 -0.08236922078120061 0.022423052260339853 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF', 'FLNA|p.P1416L|1|0.65|ENSG00000196924|chrX:154359302-154359302|G/A|missense_variant'] 69694 13378 LVYEGQLSQA True PC9_epitope_Rep6 1106.56078909158 1106.5596899358602 63.127 2 -0.08239384323262043 0.022442641017934074 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-4|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-2|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-3|PRRC2B'] 47739 9286 IYQKAFEHL True PC9_epitope_Rep6 1147.6025943339098 1147.60093490379 45.879 3 -0.08250547501165405 0.02250230433214443 0.9438714419765777 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4'] 17768 13119 EHVEAIKIGL True PC9_epitope_Rep4 1107.6288090817498 1107.6277099358601 58.356 2 -0.08251907780451101 0.022521890716733124 0.9438714419765777 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ENSG00000122952|ENST00000373944|ZWINT'] 118649 9224 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48528496793 40.434 1 -0.08259747451741635 0.022541476316422216 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 47767 10868 IYQRDPLKL True PC9_epitope_Rep2 1144.6604435631998 1144.65880490379 47.12 3 -0.08261038346381906 0.02256106113125889 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 106562 22055 SVWIGGSILA True PC9_epitope_Rep5 1001.5545815123298 1001.55348993586 89.862 2 -0.0826837079223189 0.022617998237038223 0.9438714419765777 ['ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000428275.1_1_X:53172047-53172134:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2', 'ENSG00000181786|ENST00000324436|ACTL9'] 121188 16449 VGGLGVAVV True PC9_epitope_Rep2 769.46978925921 769.4692449679301 68.512 1 -0.08270601777289685 0.022617998237038223 0.9438714419765777 ['nc|ENSG00000157593|Q8TB61-5|SLC35B2', 'nc|ENSG00000157593|Q8TB61-4|SLC35B2', 'nc|ENSG00000157593|Q8TB61-3|SLC35B2', 'nc|ENSG00000157593|Q8TB61-2|SLC35B2', 'ENSG00000157593|ENST00000393812|SLC35B2'] 132601 10896 VYPPPHQVF True PC9_epitope_Rep6 1082.5549158654999 1082.55380993586 52.774 2 -0.08274128111969917 0.022617998237038223 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 24472 21031 FAIDPHLLL True PC9_epitope_Rep4 1037.59096702105 1037.5898699358602 89.058 2 -0.08277794135641281 0.022617998237038223 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 107582 10054 TAETVEEFCR True H1975_Epitope_Rep3 1183.51793830343 1183.5168499358601 43.709 2 -0.08279328260853813 0.022617998237038223 0.9438714419765777 ['ENSG00000103381|ENST00000381774|CPPED1'] 33582 12458 GLKYSIETI True NCI_RA007_Epitope_Rep5 1022.5648118428599 1022.56370993586 54.576 2 -0.08284422708660645 0.022617998237038223 0.9438714419765777 ['ENST00000505312.5_1_5:118542414-118576152:+|nuORF'] 1663 12893 AEGFPGLEA True H1975_Epitope_Rep2 889.4181476091699 889.4175949679301 54.706 1 -0.08287082368518554 0.022617998237038223 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2'] 8292 5964 ATLEGEAAP True H1975_Epitope_Rep3 857.4130622287298 857.4125149679301 27.952 1 -0.0829173807899201 0.02263576450792252 0.9438714419765777 ['ENST00000434408.1_3_22:41833373-41842568:-|nuORF', 'ENST00000327492.3_1_22:41833342-41842568:-|nuORF'] 102295 8983 SPVDYGTSA True PC9_epitope_Rep5 895.39232678415 895.39122993586 39.496 2 -0.08294080846708682 0.02263576450792252 0.9438714419765777 ['ENSG00000149658|ENST00000370339|YTHDF1'] 17138 3302 EGVHGGLINKK True NCI_RA007_Epitope_Rep2 1150.64585612822 1150.64422490379 17.509 3 -0.08296290889408293 0.02263576450792252 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1'] 95697 19979 SAYEFVTWL True H1975_Epitope_Rep3 1114.5335117145798 1114.5324099358602 83.61 2 -0.08296357054248113 0.02263576450792252 0.9438714419765777 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25', 'ENST00000593636.1_1_19:50321571-50322554:+|nuORF'] 31544 13200 GEFNFSEV True NCI_RA007_Epitope_Rep3 927.3974121645899 927.39630993586 59.192 2 -0.08301390777812068 0.02263576450792252 0.9438714419765777 ['nc|ENSG00000136193|Q12765-3|SCRN1', 'ENSG00000136193|ENST00000242059|SCRN1', 'nc|ENSG00000136193|Q12765-2|SCRN1'] 125724 21382 VNEQLYIL True PC9_epitope_Rep1 990.5385970950199 990.53750993586 87.078 2 -0.08305724386378671 0.02264944427756083 0.9438714419765777 ['SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 6554 15842 APVPGIPTA True PC9_epitope_Rep2 821.46470387877 821.46360993586 66.195 2 -0.08305817868474856 0.02264944427756083 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 103576 16000 SRDGMNIVL True PC9_epitope_Rep1 1003.5120650773499 1003.5114749679301 66.355 1 -0.083103197824099 0.02264944427756083 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 31377 13200 GEAPVPVLP True H1975_Epitope_Rep2 877.4909186266099 877.49037496793 55.899 1 -0.08312000427024653 0.02264944427756083 0.9438714419765777 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 29860 18934 FVWSGTAEA True PC9_epitope_Rep1 966.4446967101799 966.44358993586 77.614 2 -0.0831315154253128 0.02264944427756083 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 70862 5449 MEGKVPVAA True H1975_Epitope_Rep3 900.4738886634798 900.47278993586 26.018 2 -0.08317914905095451 0.02264944427756083 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 23675 23627 EYGSIIAFF True PC9_epitope_Rep2 1045.51204799401 1045.5114749679299 96.352 1 -0.08318272647761198 0.02264944427756083 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 1282 4350 AEDRSLQAEP True H1975_Epitope_Rep3 1114.5254662120199 1114.52436993586 21.849 2 -0.08318794797442115 0.02264944427756083 0.9438714419765777 ['ENSG00000111816|ENST00000606080|FRK', 'FRK|p.G374Dfs*8|1|0.22|ENSG00000111816|chr6:115944263-115944263|C/-|frameshift_variant'] 79967 15530 PITPSPTV True PC9_epitope_Rep2 810.4487194614601 810.44762993586 65.009 2 -0.08321939006360532 0.02264944427756083 0.9438714419765777 ['ENST00000486360.1_1_1:203045208-203045709:+|nuORF'] 89110 4385 REFEERHIP True H1975_Epitope_Rep3 1211.6047195922297 1211.60308490379 21.987 3 -0.0832413256903698 0.02264944427756083 0.9438714419765777 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 31694 10271 GEIGLGTPP True H1975_Epitope_Rep2 839.43888305375 839.43833496793 44.516 1 -0.08324547690320351 0.02264944427756083 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA'] 64735 9633 LRRAEEYLI True PC9_epitope_Rep6 1161.6506071554898 1161.64897490379 47.397 3 -0.08324592176086115 0.02264944427756083 0.9438714419765777 ['ENSG00000074966|ENST00000264316|TXK', 'TXK|p.W120*|1|0.11|ENSG00000074966|chr4:48112327-48112327|C/-|frameshift_variant', 'ENST00000510457.1_1_4:48091737-48136211:-|nuORF'] 118059 20673 VATLLLQL True PC9_epitope_Rep4 869.55860426361 869.55750993586 87.677 2 -0.08325387822810475 0.02264944427756083 0.9438714419765777 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8'] 101586 10706 SPEEMQEPP True PC9_epitope_Rep5 1042.4277263167 1042.42662993586 46.17 2 -0.08327220230938567 0.02264944427756083 0.9438714419765777 ['nc|ENSG00000182606|Q9UPV9-2|TRAK1'] 112468 16473 TNQIYTNEI True PC9_epitope_Rep1 1094.52440358286 1094.5233099358602 68.189 2 -0.0833133294263766 0.022668562388609648 0.9438714419765777 ['ENST00000374791.7_1_11:132205045-132205564:+|nuORF'] 102552 5687 SQALQHAL True NCI_RA007_Epitope_Rep4 866.46101548066 866.45990993586 28.485 2 -0.08340514417931937 0.022668562388609648 0.9438714419765777 ['ENSG00000138629|ENST00000395081|UBL7'] 18958 13890 ELFKEYQEEAY True H1975_Epitope_Rep1 1447.6507262947903 1447.64962993586 58.577 2 -0.08345849000942601 0.022687224669603524 0.9438714419765777 ['ENSG00000243710|ENST00000372492|CFAP57', 'nc|ENSG00000243710|Q96MR6-2|CFAP57'] 140426 19632 YYFEGIKQTF True PC9_epitope_Rep2 1294.6233893481397 1294.6217549037901 80.9 3 -0.08349018030819469 0.022687224669603524 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 83297 14993 QAIEKLEEI True PC9_epitope_Rep2 1071.58119018299 1071.58008993586 62.927 2 -0.08349382802278588 0.022687224669603524 0.9438714419765777 ['ENSG00000230453|ENST00000684830|ANKRD18B', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B', 'ENST00000354752.5_1_9:99922575-99942308:-|nuORF'] 35415 16096 GTDGFVINL True PC9_epitope_Rep6 934.47599683846 934.47544496793 74.249 1 -0.0835344556054894 0.022705430081691496 0.9438714419765777 ['ENSG00000100079|ENST00000215886|LGALS2'] 13858 11466 DRATLAAL True PC9_epitope_Rep2 829.4657665079299 829.46521496793 49.422 1 -0.08360207754550655 0.022705430081691496 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 24230 16755 EYVSQHLVF True PC9_epitope_Rep4 1120.5553097883198 1120.5542099358602 72.415 2 -0.08360498334699053 0.022705430081691496 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 37401 10152 GVYNGKTFNQV True PC9_epitope_Rep4 1225.60913626633 1225.60802993586 46.726 2 -0.08369963790330513 0.022705430081691496 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 99541 5015 SLEWSSER True NCI_RA007_Epitope_Rep5 992.45632402304 992.45522993586 25.993 2 -0.08371569216652845 0.022722267822466016 0.9438714419765777 ['ENSG00000135862|ENST00000258341|LAMC1'] 27110 21824 FLQEQLVEL True PC9_epitope_Rep5 1117.60192562757 1117.60082993586 88.979 2 -0.08371904458332198 0.022722267822466016 0.9438714419765777 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant'] 35539 16493 GTIGLIHAI True PC9_epitope_Rep4 893.53345214493 893.53234993586 71.41 2 -0.08378171173907632 0.022722267822466016 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 53806 13177 KYFLWEEKF True NCI_RA007_Epitope_Rep5 1288.6492101731599 1288.64755490379 57.362 3 -0.08378248033415696 0.022722267822466016 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 6986 6036 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep5 935.4348606187698 935.43376993586 29.899 2 -0.08378270658970435 0.022722267822466016 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 110092 18211 TIAEIKNLF True PC9_epitope_Rep6 1047.59644632431 1047.5953499358602 82.69 2 -0.08379740632677304 0.022722267822466016 0.9438714419765777 ['ENST00000594807.5_1_19:14640508-14674579:+|nuORF', 'ENST00000593637.5_1_19:14640508-14674910:+|nuORF', 'ENST00000596953.5_1_19:14640508-14675852:+|nuORF', 'ENSG00000099797|ENST00000215567|TECR', 'ENST00000601652.5_1_19:14640444-14674077:+|nuORF'] 323 13149 AAIGALQEA True PC9_epitope_Rep5 842.4497820906199 842.44868993586 55.582 2 -0.0837997877680304 0.022722267822466016 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'H3-3B|p.Q86H|1|0.32|ENSG00000132475|chr17:75778834-75778834|C/A|missense_variant'] 64140 5294 LQEPVQEQP True H1975_Epitope_Rep3 1066.5294889632999 1066.52838993586 25.442 2 -0.08381001526248319 0.022739100844709557 0.9438714419765777 ['ENSG00000155761|ENST00000336338|SPAG17'] 9986 11268 AYSRVQYQF True PC9_epitope_Rep6 1160.5614577979202 1160.56036993586 54.354 2 -0.08381076667742077 0.022739100844709557 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3'] 5855 8258 APGKGILAA True PC9_epitope_Rep5 796.4806882960798 796.47958993586 36.705 2 -0.08383524594852089 0.022739100844709557 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 11951 10458 DHSQGLEL True PC9_epitope_Rep4 897.4192102383299 897.41810993586 47.937 2 -0.08383586297964052 0.022739100844709557 0.9438714419765777 ['ENST00000461942.5_1_9:116079031-116083765:-|nuORF', 'nc|ENSG00000148225|Q8NA23-2|WDR31', 'ENSG00000148225|ENST00000374193|WDR31'] 110545 16662 TIRNVFSV True PC9_epitope_Rep1 934.52361573722 934.52250993586 68.919 2 -0.08384700718326252 0.022739100844709557 0.9438714419765777 ['nc|ENSG00000100271|O95922-4|TTLL1', 'ENSG00000100271|ENST00000266254|TTLL1', 'ENST00000439248.5_1_22:43464548-43465849:-|nuORF', 'TTLL1|p.E89Rfs*36|1|0.42|ENSG00000100271|chr22:43069693-43069693|C/-|frameshift_variant'] 91513 7452 RPAAGFVA True PC9_epitope_Rep3 787.4340724568299 787.43296993586 33.668 2 -0.08386309081970536 0.022739100844709557 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 140722 9665 YYQHIVTTL True NCI_RA007_Epitope_Rep3 1136.5866099166 1136.58550993586 45.095 2 -0.08387638851360053 0.022739100844709557 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 44880 9891 IQDDAVHTL True PC9_epitope_Rep3 1010.50327421546 1010.50216993586 43.003 2 -0.08388070993683841 0.022758206565252202 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 35482 20419 GTFDIFYTA True PC9_epitope_Rep6 1033.4756624852898 1033.47456993586 91.246 2 -0.08400445183128537 0.022758206565252202 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 58234 19915 LESVPMTWDP True PC9_epitope_Rep1 1173.53761111885 1173.53650993586 81.421 2 -0.08407667897063516 0.02277685487260573 0.9438714419765777 ['ENSG00000155363|ENST00000369645|MOV10', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 131017 19089 VVLGIRPIRL True PC9_epitope_Rep3 1134.76009803482 1134.7584449037902 78.65 3 -0.08409239953715957 0.02277685487260573 0.9438714419765777 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 84227 15359 QEVAVKEQLT True PC9_epitope_Rep4 1143.6135529404298 1143.61244993586 67.01 2 -0.0841070318221288 0.02277685487260573 0.9438714419765777 ['ENSG00000197892|ENST00000524189|KIF13B'] 109549 6174 THAPATLEA True PC9_epitope_Rep3 909.45559574705 909.45448993586 28.79 2 -0.08417025602780596 0.022792763947810775 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 47760 7955 IYQRDPLKL True NCI_RA007_Epitope_Rep5 1144.6604435631998 1144.65880490379 37.287 3 -0.08418073091972908 0.022792763947810775 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 38529 6476 HHDSHSSVIL True PC9_epitope_Rep5 1130.5468703629401 1130.54521490379 29.882 3 -0.08421570126534836 0.022792763947810775 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 64022 10604 LQDAGLLAD True H1975_Epitope_Rep3 914.4709114580199 914.46980993586 45.857 2 -0.08425884235930964 0.022792763947810775 0.9438714419765777 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF', 'ENST00000320442.8_1_12:58014065-58016599:+|nuORF'] 60202 9850 LIANNNAP True PC9_epitope_Rep1 825.43446637965 825.43336993586 42.748 2 -0.08429170213824087 0.022792763947810775 0.9438714419765777 ['nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 108786 7987 TEQDVLRSRVK True NCI_RA007_Epitope_Rep1 1329.73646203777 1329.73480490379 35.06 3 -0.08430377857736153 0.022792763947810775 0.9438714419765777 ['ENSG00000114349|ENST00000232461|GNAT1'] 23759 11165 EYIRSLNQF True NCI_RA007_Epitope_Rep2 1168.58767254576 1168.58656993586 48.012 2 -0.08430764739567312 0.022792763947810775 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 131127 10396 VVPDKISEV True PC9_epitope_Rep2 984.54916177872 984.54806993586 45.31 2 -0.08431035069490203 0.022792763947810775 0.9438714419765777 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 32877 12635 GILKNGLI True PC9_epitope_Rep3 826.5276384884999 826.52654993586 53.623 2 -0.08432068864575495 0.022792763947810775 0.9438714419765777 ['nc|ENSG00000062194|Q86WP2-4|GPBP1', 'nc|ENSG00000062194|Q86WP2-3|GPBP1', 'ENSG00000062194|ENST00000506184|GPBP1', 'nc|ENSG00000062194|Q86WP2-2|GPBP1'] 100855 11005 SLSEISNPE True PC9_epitope_Rep2 974.4556553167 974.45454993586 47.652 2 -0.08439040837700584 0.02281231865207212 0.9438714419765777 ['ENSG00000150907|ENST00000379561|FOXO1'] 57508 5143 LEKPDPVAA True H1975_Epitope_Rep2 938.5072969667399 938.50618993586 24.859 2 -0.0844556714867783 0.02283050203093423 0.9438714419765777 ['ENSG00000169951|ENST00000395091|ZNF764', 'nc|ENSG00000169951|Q96H86|ZNF764', 'ENST00000395094.3_1_16:30543822-30545758:-|nuORF', 'ENST00000252799.3_1_16:30543822-30545758:-|nuORF', 'nc|ENSG00000169955|Q9BV97|ZNF747', 'ENSG00000169955|ENST00000693075|ZNF747'] 13952 12180 DRLKLQNEL True PC9_epitope_Rep1 1127.62987171091 1127.62822490379 51.708 3 -0.08447652306641255 0.02283050203093423 0.9438714419765777 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 116219 21445 TVTSVLTSV True PC9_epitope_Rep1 905.50696261357 905.50586993586 87.327 2 -0.08448687464219484 0.02283050203093423 0.9438714419765777 ['ENSG00000106689|ENST00000373615|LHX2'] 97926 9881 SHPLLPGA True PC9_epitope_Rep3 790.43373810366 790.43264993586 42.965 2 -0.0845004097246604 0.02283050203093423 0.9438714419765777 ['ENST00000589764.1_1_18:12067489-12068164:-|nuORF'] 127404 22105 VQQVQVIL True PC9_epitope_Rep5 925.5596668927698 925.55856993586 90.06 2 -0.0845449602839562 0.022840456809136184 0.9438714419765777 ['ENST00000533105.1_1_11:47600795-47602306:+|nuORF'] 68822 6061 LVDSNNPKI True PC9_epitope_Rep6 998.53965972418 998.53856993586 31.688 2 -0.08459506978243796 0.022840456809136184 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 38556 16084 HHFEQMLKL True PC9_epitope_Rep1 1181.6015487880898 1181.59990490379 66.681 3 -0.08461785224942726 0.022840456809136184 0.9438714419765777 ['nc|ENSG00000113569|O75694-2|NUP155', 'ENSG00000113569|ENST00000231498|NUP155'] 128187 5982 VRSWRLREMKP True PC9_epitope_Rep1 1456.8085218625597 1456.80688490379 27.824 3 -0.08470247356440254 0.022840456809136184 0.9438714419765777 ['ENSG00000183304|ENST00000381003|FAM9A'] 17505 17649 EHIMDLTRL True PC9_epitope_Rep3 1126.58047899034 1126.57882490379 73.079 3 -0.08475664429614087 0.022840456809136184 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 43001 11359 IGELIM[Oxidation]IKFK True H1975_Epitope_Rep3 1206.70461725474 1206.7035099358602 48.803 2 -0.08475885674425244 0.022840456809136184 0.9438714419765777 ['ENSG00000166035|ENST00000299022|LIPC'] 30136 15840 FYQPKIQQF True PC9_epitope_Rep4 1197.61824439805 1197.6171499358602 68.852 2 -0.08480058754921822 0.022840456809136184 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 101889 14223 SPLHLAVEA True PC9_epitope_Rep3 935.5076313199099 935.50652993586 59.794 2 -0.08483947498671056 0.022840456809136184 0.9438714419765777 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 62476 10213 LLSNDEVTIK True PC9_epitope_Rep6 1130.6183039677 1130.61720993586 49.93 2 -0.08485668194448674 0.022840456809136184 0.9438714419765777 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 112836 17782 TPMPPISSV True PC9_epitope_Rep1 927.47355431031 927.47244993586 73.196 2 -0.084860955926154 0.022840456809136184 0.9438714419765777 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 28038 13239 FRAQEIDGQAL True PC9_epitope_Rep4 1246.6305999868998 1246.6295099358601 58.82 2 -0.0848849632231447 0.022840456809136184 0.9438714419765777 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'ENST00000467894.5_1_1:33790468-33797238:-|nuORF', 'nc|ENSG00000134686|Q8IXK0-2|PHC2', 'nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3'] 79473 10558 PGPQTVLI True NCI_RA007_Epitope_Rep1 823.4803539429099 823.47924993586 45.052 2 -0.084893249791877 0.022840456809136184 0.9438714419765777 ['ENSG00000027001|ENST00000382172|MIPEP', 'ENST00000382172.3_1_13:24460505-24460568:-|nuORF', 'ENST00000424756.1_1_13:21875607-21878632:+|nuORF'] 115278 11892 TVDNARIVL True PC9_epitope_Rep4 999.5712942056299 999.57018993586 53.517 2 -0.08489469693725953 0.022840456809136184 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000458108.1_1_3:32300804-32301218:+|nuORF', 'ENST00000439811.1_1_6:112683280-112683757:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 29862 18365 FVWSGTAEA True PC9_epitope_Rep2 966.4446967101799 966.44414496793 75.97 1 -0.0849195985208248 0.022840456809136184 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 129202 7726 VTDIYNHRFHR True H1975_Epitope_Rep3 1456.7323797168401 1456.73074490379 34.701 3 -0.08493650243239305 0.022840456809136184 0.9438714419765777 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15', 'USP15|p.R710Tfs*14|1|0.16|ENSG00000135655|chr12:62391317-62391318|-/A|frameshift_variant'] 44107 14489 ILMQGMNILI True NCI_RA007_Epitope_Rep5 1144.63482306232 1144.6337299358602 62.411 2 -0.08494025135735296 0.022840456809136184 0.9438714419765777 ['DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant'] 98749 12655 SISCAQTPCIP True PC9_epitope_Rep2 1118.51001647202 1118.5089099358602 53.985 2 -0.08494097280059847 0.022840456809136184 0.9438714419765777 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16', 'nc|ENSG00000172349|Q14005-3|IL16', 'nc|ENSG00000172349|Q14005-4|IL16'] 95444 16013 SALNEVHLV True PC9_epitope_Rep3 980.52909504048 980.52798993586 66.74 2 -0.08495005620394357 0.022840456809136184 0.9438714419765777 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 96891 6458 SETEATPVP True NCI_RA007_Epitope_Rep3 929.4341915961298 929.43364496793 32.432 1 -0.08496085425611523 0.022840456809136184 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 118851 4418 VEEKPPPAP True H1975_Epitope_Rep2 962.5072969667398 962.50618993586 22.102 2 -0.08497473282470686 0.022840456809136184 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 41042 17111 HYILHNSFF True PC9_epitope_Rep2 1176.5716285587998 1176.56998490379 71.067 3 -0.0849823115329598 0.022840456809136184 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 91957 5500 RPPPPPPPP True PC9_epitope_Rep1 950.5337864980999 950.53268993586 25.986 2 -0.08500492452113767 0.022840456809136184 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 132205 7555 VYKDHQTITI True PC9_epitope_Rep4 1216.6451874218799 1216.6435349037902 36.436 3 -0.08504083421437239 0.022874967507148427 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 4243 14816 AIGSVQALI True H1975_Epitope_Rep2 870.5174677276199 870.51636993586 62.147 2 -0.0850480546707977 0.022874967507148427 0.9438714419765777 ['nc|ENSG00000123572|Q7Z2Y5-2|NRK', 'ENSG00000123572|ENST00000243300|NRK'] 65038 12572 LSDKEELVGT True PC9_epitope_Rep6 1089.5553693579698 1089.55426993586 59.801 2 -0.08514602525064152 0.022874967507148427 0.9438714419765777 ['GDF6|p.A164T|1|0.6|ENSG00000156466|chr8:96145441-96145441|C/T|missense_variant'] 72774 20675 NAFFDEKEDT True PC9_epitope_Rep1 1214.5091474415399 1214.50804993586 84.35 2 -0.08517126841017351 0.022874967507148427 0.9438714419765777 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000561199.5_1_14:24652794-24657993:-|nuORF'] 42243 5987 IEHEENHNIEK True NCI_RA007_Epitope_Rep1 1390.64770660302 1390.6460549037902 27.332 3 -0.08517419353175212 0.022874967507148427 0.9438714419765777 ['ZNF571|p.Q156E|2|0.18|ENSG00000180479|chr19:37565962-37565962|G/C|missense_variant'] 136882 14675 YIYKDTIQV True PC9_epitope_Rep2 1141.60192562757 1141.60082993586 61.712 2 -0.0851774578208273 0.022874967507148427 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 84028 21381 QENVLYIL True PC9_epitope_Rep1 990.5385970950199 990.5380449679301 87.074 1 -0.08520342544691964 0.022874967507148427 0.9438714419765777 ['ENSG00000122733|ENST00000242315|PHF24'] 1343 11969 AEEDPPWAP True H1975_Epitope_Rep1 1010.4345259492999 1010.43342993586 51.043 2 -0.08521383499882049 0.022874967507148427 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 34856 8352 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42883496793 39.583 1 -0.08523461824755726 0.022874967507148427 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 36771 9587 GVPENGYQTLY True H1975_Epitope_Rep2 1239.5771674317102 1239.57606993586 41.851 2 -0.0852446850806193 0.022874967507148427 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 52579 7961 KPYDGIPAS True PC9_epitope_Rep5 946.4759968384599 946.47488993586 35.561 2 -0.08524748710984363 0.022874967507148427 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR', 'ENST00000485503.1_1_7:55266411-55268235:+|nuORF'] 134341 5271 WRYHKEER True NCI_RA007_Epitope_Rep1 1202.5944892616997 1202.59285490379 24.584 3 -0.08526810058020202 0.022874967507148427 0.9438714419765777 ['nc|ENSG00000111596|Q9NZN8-5|CNOT2', 'ENSG00000111596|ENST00000229195|CNOT2', 'nc|ENSG00000111596|Q9NZN8-3|CNOT2', 'nc|ENSG00000111596|Q9NZN8-2|CNOT2'] 98633 19911 SIPEGALVAV True PC9_epitope_Rep2 954.5385970950199 954.5380449679301 81.983 1 -0.08528913878021384 0.022894505318723505 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant'] 68018 6986 LTMPGGVAK True NCI_RA007_Epitope_Rep4 872.47897404392 872.47786993586 33.497 2 -0.08531017231107796 0.0229126679462572 0.9438714419765777 ['nc|ENSG00000087266|P78314-2|SH3BP2', 'ENST00000511663.5_1_4:2811506-2826487:+|nuORF', 'ENST00000511237.5_1_4:2795936-2826487:+|nuORF', 'ENST00000511185.5_1_4:2814082-2826487:+|nuORF', 'ENSG00000087266|ENST00000503393|SH3BP2', 'nc|ENSG00000087266|P78314-3|SH3BP2', 'nc|ENSG00000087266|P78314-4|SH3BP2'] 52040 7937 KLHDVELHQV True PC9_epitope_Rep1 1216.65642081192 1216.65478490379 35.352 3 -0.08531297278788012 0.0229126679462572 0.9438714419765777 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000560075.1_1_15:52439654-52476873:-|nuORF'] 34590 18004 GQGEVLVYV True PC9_epitope_Rep6 962.5072969667398 962.50618993586 81.88 2 -0.08531857758051095 0.0229126679462572 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 84667 4688 QHETSSPAL True PC9_epitope_Rep3 968.4563240230399 968.45522993586 23.126 2 -0.08532056865089609 0.0229126679462572 0.9438714419765777 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 5781 15152 APELQGVEV True PC9_epitope_Rep6 940.4865615221598 940.48546993586 70.356 2 -0.08542860948298248 0.022949902043101034 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 80177 15514 PLAAIAPS True PC9_epitope_Rep4 738.4275900940601 738.4270449679301 67.6 1 -0.08544314495286742 0.022949902043101034 0.9438714419765777 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF'] 132111 17269 VYINTAQEF True PC9_epitope_Rep4 1083.5236753068698 1083.52256993586 74.43 2 -0.08546632793510982 0.022949902043101034 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 77483 20416 NYPPQYLILKL True PC9_epitope_Rep4 1360.77547331544 1360.77436993586 86.676 2 -0.08547773654663124 0.022949902043101034 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 7860 4298 ATALKLSQD True NCI_RA007_Epitope_Rep2 945.51311062317 945.51200993586 21.356 2 -0.08548387820639529 0.022949902043101034 0.9438714419765777 ['ENSG00000120051|ENST00000369704|CFAP58'] 102984 18339 SQISDTSVVL True PC9_epitope_Rep1 1047.5448046742702 1047.54427496793 75.329 1 -0.08548518505543092 0.022949902043101034 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 103801 13499 SRGDFVVEY True PC9_epitope_Rep4 1070.50327421546 1070.50277496793 59.821 1 -0.08551157559512994 0.022965761228038617 0.9438714419765777 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A'] 278 16464 AAGTVFTTV True PC9_epitope_Rep2 865.4545331178899 865.45342993586 68.57 2 -0.08553094161173445 0.022965761228038617 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 100452 23158 SLPEVLPIL True PC9_epitope_Rep5 979.5953836951498 979.59428993586 94.066 2 -0.085571714030144 0.022965761228038617 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 69166 10183 LVLVGDGG True NCI_RA007_Epitope_Rep4 728.40685464948 728.40630496793 46.025 1 -0.08558846282122115 0.022965761228038617 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN'] 71890 5965 MPNGTPHPTAA True PC9_epitope_Rep5 1092.50222866964 1092.50112993586 27.94 2 -0.08559161778512013 0.022965761228038617 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 65076 21703 LSDLGVILS True PC9_epitope_Rep1 915.52769805815 915.52660993586 88.312 2 -0.08560037834551483 0.022965761228038617 0.9438714419765777 ['ENSG00000144045|ENST00000404568|DQX1', 'nc|ENSG00000144045|Q8TE96-2|DQX1'] 21201 15911 ERFEIPIKV True PC9_epitope_Rep6 1129.6495445263297 1129.64788490379 73.485 3 -0.08561302823605337 0.022965761228038617 0.9438714419765777 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 117238 21753 TYVTILPEL True PC9_epitope_Rep4 1047.58521293427 1047.5841099358602 91.869 2 -0.08561401624928323 0.022965761228038617 0.9438714419765777 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'ENST00000472697.5_1_3:142095319-142144369:-|nuORF'] 38187 3425 HESGHAIIA True H1975_Epitope_Rep1 933.4668291370899 933.4657299358599 17.368 2 -0.08573372022982148 0.022965761228038617 0.9438714419765777 ['nc|ENSG00000136758|Q96TA2-3|YME1L1', 'ENSG00000136758|ENST00000376016|YME1L1', 'nc|ENSG00000136758|Q96TA2|YME1L1'] 118856 4090 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 20.858 2 -0.08577836745639239 0.022985289414774544 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 98635 18052 SIPEGALVAV True PC9_epitope_Rep6 954.5385970950199 954.53750993586 82.068 2 -0.08581167259850332 0.023003897271909664 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant'] 76703 4368 NTNPNFVR True PC9_epitope_Rep6 960.4777281739599 960.47662993586 23.893 2 -0.08585553496963734 0.023003897271909664 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 68266 12700 LTRGQVWL True H1975_Epitope_Rep2 971.5552502186698 971.55414993586 53.951 2 -0.08585578457259768 0.023003897271909664 0.9438714419765777 ['ENST00000587009.5_1_19:4446812-4447750:-|nuORF', 'ENST00000588238.1_1_19:4447432-4447750:-|nuORF'] 778 19662 AAYGWPLYI True H1975_Epitope_Rep2 1052.5331177917599 1052.53202993586 81.578 2 -0.08590767970297515 0.023023423135342554 0.9438714419765777 ['ENSG00000164535|ENST00000297056|DAGLB', 'nc|ENSG00000164535|Q8NCG7-2|DAGLB'] 103762 16192 SRFPEALRL True PC9_epitope_Rep1 1087.61382772395 1087.6127299358602 67.099 2 -0.08591825607343721 0.023040645857479718 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 138045 5273 YQDPHSTAV True PC9_epitope_Rep5 1016.45632402304 1016.45522993586 25.299 2 -0.08592771542666199 0.023040645857479718 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 74608 7138 NLDSARFRY True H1975_Epitope_Rep2 1140.5676058075198 1140.56596490379 32.389 3 -0.08593262976393262 0.023040645857479718 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 109524 5343 THAGAHLDL True PC9_epitope_Rep4 933.4668291370899 933.4657299358599 27.269 2 -0.08593921152937925 0.023040645857479718 0.9438714419765777 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF', 'ENST00000446317.1_1_20:3470835-3470958:-|nuORF'] 1738 7474 AEGSTYVP True H1975_Epitope_Rep3 822.3759484440199 822.3753949679301 33.727 1 -0.08596561354426055 0.023040645857479718 0.9438714419765777 ['ENSG00000170759|ENST00000302418|KIF5B', 'KIF5B|p.E334Gfs*12|1|0.31|ENSG00000170759|chr10:32034800-32034801|-/C|frameshift_variant'] 1031 11587 AEAGFLAEA True H1975_Epitope_Rep3 877.4181476091699 877.4175949679301 49.698 1 -0.08597164713730698 0.023040645857479718 0.9438714419765777 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000487660.1_1_3:53268946-53276200:-|nuORF', 'ENST00000472528.5_1_3:53269083-53276224:-|nuORF'] 43299 12172 IHEKELLLA True PC9_epitope_Rep4 1064.62299542532 1064.62188993586 54.637 2 -0.08599640608409945 0.023059707457437455 0.9438714419765777 ['ENSG00000258986|ENST00000556573|TMEM179'] 20343 12153 EPGFSEVLP True H1975_Epitope_Rep3 973.4756624852898 973.47511496793 51.917 1 -0.0860160170284602 0.023059707457437455 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 47592 21240 IYNGETLVF True PC9_epitope_Rep5 1054.5335117145798 1054.53297496793 86.751 1 -0.08603173814635415 0.02307738416351975 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 35412 17151 GTDGFVINL True PC9_epitope_Rep4 934.47599683846 934.47544496793 73.978 1 -0.08605170967536845 0.02307738416351975 0.9438714419765777 ['ENSG00000100079|ENST00000215886|LGALS2'] 12610 5877 DLEAHIDSANK True PC9_epitope_Rep4 1211.57823006087 1211.57659490379 29.501 3 -0.0861168113683102 0.02307738416351975 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 29150 16668 FTVDSRPLTQV True PC9_epitope_Rep5 1261.66665114245 1261.66554993586 69.118 2 -0.08614770782807796 0.02307738416351975 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 103761 16094 SRFPEALRL True PC9_epitope_Rep1 1087.61382772395 1087.6127299358602 66.722 2 -0.08616397261591285 0.02307738416351975 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 36819 21505 GVPQALFGV True PC9_epitope_Rep5 886.4912529797799 886.49070496793 87.754 1 -0.08622925516386797 0.023155455217469482 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 39714 14140 HPVHPFLAV True PC9_epitope_Rep3 1015.56033559911 1015.55922993586 59.475 2 -0.08623081741521167 0.023155455217469482 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 85718 21507 QLSLAQLI True PC9_epitope_Rep2 884.5331177917599 884.53256496793 88.195 1 -0.08625246871749295 0.023155455217469482 0.9438714419765777 ['ENSG00000117971|ENST00000261751|CHRNB4', 'nc|ENSG00000117971|P30926-2|CHRNB4', 'ENST00000560511.5_1_15:78923416-78927882:-|nuORF'] 117658 15890 VAISSLTYL True H1975_Epitope_Rep2 965.5433481222901 965.54224993586 66.322 2 -0.0862584157676147 0.023155455217469482 0.9438714419765777 ['ENSG00000068697|ENST00000175091|LAPTM4A'] 131079 12104 VVLVLAGR True PC9_epitope_Rep4 825.5436229058099 825.54252993586 54.362 2 -0.08626967729422552 0.02317219336795845 0.9438714419765777 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF', 'ENST00000593262.1_1_17:41150683-41150953:+|nuORF', 'ENSG00000131469|ENST00000253788|RPL27'] 38147 3907 HEQQFAHPP True H1975_Epitope_Rep2 1089.4991918945298 1089.4980899358602 20.07 2 -0.08628130539783864 0.02317219336795845 0.9438714419765777 ['nc|ENSG00000130810|Q9NQ55-2|PPAN', 'ENSG00000130810|ENST00000253107|PPAN', 'nc|ENSG00000130810|Q9NQ55-3|PPAN'] 44596 10013 IPGTGFTVDA True PC9_epitope_Rep1 976.4865615221598 976.48546993586 43.381 2 -0.08629665196436269 0.02317219336795845 0.9438714419765777 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 104976 22454 STIANVWLV True PC9_epitope_Rep5 1001.55458151233 1001.5540749679301 91.37 1 -0.08632075009197754 0.02317219336795845 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1', 'nc|ENSG00000134531|P54849-2|EMP1'] 75493 17152 NQINGSFAL True PC9_epitope_Rep6 962.48214484806 962.48159496793 78.561 1 -0.08632876495825735 0.02317219336795845 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000519188.1_1_8:121500412-121502815:+|nuORF'] 114421 19062 TSDTQWGWFY True H1975_Epitope_Rep2 1289.53530261973 1289.5342099358602 79.133 2 -0.0863432137386299 0.02317219336795845 0.9438714419765777 ['nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'nc|ENSG00000111224|Q9NR21-5|PARP11'] 96575 6696 SELQEEVP True NCI_RA007_Epitope_Rep5 929.43419159613 929.43308993586 32.427 2 -0.08634627398152611 0.02317219336795845 0.9438714419765777 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.K736Rfs*16|1|0.7|ENSG00000176927|chr17:30055895-30055895|A/-|frameshift_variant'] 26534 22134 FIVEETLPL True PC9_epitope_Rep2 1059.58521293427 1059.5841099358602 90.617 2 -0.08646276298220897 0.023211681748267113 0.9438714419765777 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 75235 7081 NPKEFYHEV True PC9_epitope_Rep2 1161.54547338061 1161.54382490379 32.633 3 -0.08651858288584578 0.023229337274797267 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 34303 4998 GPPQEPSP True H1975_Epitope_Rep2 807.3762827971899 807.37518993586 24.31 2 -0.08651909932981984 0.023229337274797267 0.9438714419765777 ['RABGAP1-TTLL11|1|fusion', 'ENSG00000175764|ENST00000321582|TTLL11'] 106532 18931 SVVSPSSFENV True PC9_epitope_Rep2 1150.5506183307 1150.5495299358602 78.183 2 -0.08652143086945892 0.023229337274797267 0.9438714419765777 ['nc|ENSG00000289694|P60953-1|CDC42', 'ENSG00000070831|ENST00000656825|CDC42'] 1869 13460 AEIGAVTLVSA True H1975_Epitope_Rep3 1029.57062549929 1029.5695299358601 57.047 2 -0.08653083813708322 0.023229337274797267 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 102301 6474 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 30.317 2 -0.08656016678643867 0.023229337274797267 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 6144 13575 APNTPAWEA True PC9_epitope_Rep5 955.43994568291 955.43884993586 57.24 2 -0.08664095059887623 0.023286932555770804 0.9438714419765777 ['ENSG00000039068|ENST00000261769|CDH1', 'ENST00000562836.5_1_16:68797408-68867399:+|nuORF'] 84918 7856 QHSVQVDQL True PC9_epitope_Rep4 1052.5250722892 1052.5239699358601 37.634 2 -0.08664430522494519 0.023286932555770804 0.9438714419765777 ['ENSG00000269335|ENST00000594239|IKBKG', 'nc|ENSG00000269335|Q9Y6K9-2|IKBKG'] 119695 10572 VETDFSTPTP True H1975_Epitope_Rep2 1092.49752012868 1092.4969749679299 45.688 1 -0.08667154085662614 0.023286932555770804 0.9438714419765777 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 25505 7147 FEQEMATA True NCI_RA007_Epitope_Rep4 925.3851332287298 925.38402993586 34.112 2 -0.08668434273768916 0.023286932555770804 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000417985.1_1_X:46147855-46148119:-|nuORF', 'ENST00000423183.1_1_3:12112396-12112453:+|nuORF', 'ENST00000418987.2_1_9:103493819-103494230:+|nuORF', 'POTEE|p.L921M|1|0.15|ENSG00000188219|chr2:131264216-131264216|C/A|missense_variant', 'POTEE|p.A931S|1|0.19|ENSG00000188219|chr2:131264246-131264246|G/T|missense_variant', 'ENST00000428275.1_1_X:53172253-53172460:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 18871 16016 ELEKLQAEL True PC9_epitope_Rep3 1071.5811901829898 1071.58008993586 66.753 2 -0.08669540404768866 0.023286932555770804 0.9438714419765777 ['ENST00000566703.1_1_16:30776326-30777900:+|nuORF', 'nc|ENSG00000103549|O75150-3|RNF40', 'ENST00000493683.5_1_16:30773821-30780773:+|nuORF', 'ENSG00000103549|ENST00000324685|RNF40'] 4995 14935 ALLAPLRGA True PC9_epitope_Rep4 880.54943656224 880.54832993586 65.389 2 -0.08671245261968784 0.023302715654952077 0.9438714419765777 ['nc|ENSG00000138892|A6PVC2|TTLL8', 'ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 118110 18752 VATWVDETL True PC9_epitope_Rep6 1032.51277627 1032.51166993586 84.77 2 -0.08673559080623261 0.023302715654952077 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 4283 6515 AIITPPPAK True NCI_RA007_Epitope_Rep2 906.5538532363399 906.55274993586 29.952 2 -0.08686586319376455 0.023302715654952077 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000506532.5_1_5:134705062-134724783:-|nuORF', 'ENST00000513210.5_1_5:134695623-134724711:-|nuORF', 'ENST00000360597.8_1_5:134681666-134724783:-|nuORF'] 113941 14524 TRKDIAVI True PC9_epitope_Rep2 914.5549158654999 914.55380993586 61.139 2 -0.08690017458607002 0.023302715654952077 0.9438714419765777 ['ERCC2|p.E512K|1|0.17|ENSG00000104884|chr19:45355674-45355674|C/T|missense_variant'] 118226 17986 VAYLDPLEL True NCI_RA007_Epitope_Rep3 1031.5539128059897 1031.55280993586 78.816 2 -0.08692791130882983 0.023302715654952077 0.9438714419765777 ['ENSG00000187244|ENST00000270233|BCAM'] 96111 11651 SEDSAPGVWRE True H1975_Epitope_Rep2 1231.5469299325898 1231.5458299358602 49.885 2 -0.08692995746561735 0.023302715654952077 0.9438714419765777 ['nc|ENSG00000174516|Q8N2H9-4|PELI3', 'nc|ENSG00000174516|Q8N2H9-3|PELI3', 'nc|ENSG00000174516|Q8N2H9-2|PELI3', 'ENSG00000174516|ENST00000320740|PELI3'] 31025 8190 GAVGKTCLL True H1975_Epitope_Rep2 860.47897404392 860.47786993586 36.454 2 -0.08694452708024886 0.023302715654952077 0.9438714419765777 ['nc|ENSG00000289694|P60953-1|CDC42', 'ENSG00000070831|ENST00000656825|CDC42', 'ENST00000518493.1_1_8:144077326-144077527:+|nuORF', 'RAC1-TTC7A|1|fusion', 'ENSG00000177105|ENST00000351018|RHOG', 'nc|ENSG00000126785|Q9H4E5-2|RHOJ', 'ENSG00000126785|ENST00000316754|RHOJ', 'ENSG00000119729|ENST00000238738|RHOQ', 'ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENSG00000128340|ENST00000249071|RAC2', 'ENST00000469532.1_1_22:37628528-37640188:-|nuORF'] 77312 12879 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.60641490379 54.837 3 -0.08697243895917466 0.023302715654952077 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 57730 14738 LENLTLMQL True PC9_epitope_Rep5 1073.57908200801 1073.5779899358602 61.689 2 -0.08698676843261215 0.023302715654952077 0.9438714419765777 ['ENST00000258301.5_1_1:180971785-180971830:-|nuORF'] 125107 17014 VLPGVDALSNI True NCI_RA007_Epitope_Rep1 1096.61282466444 1096.61227496793 70.309 1 -0.0870035369617495 0.02331895863280626 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 134783 21414 WYGYHFPEL True PC9_epitope_Rep1 1210.5447451046198 1210.54364993586 87.205 2 -0.08703733982760538 0.02331895863280626 0.9438714419765777 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000484998.5_1_20:2635830-2636687:+|nuORF', 'ENST00000480992.5_1_20:2635438-2636687:+|nuORF'] 60533 21476 LIPEYLNFI True PC9_epitope_Rep6 1120.61684741572 1120.61574993586 95.484 2 -0.08704599608480264 0.02331895863280626 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 136504 14175 YHKWRIYYKKR True PC9_epitope_Rep5 1639.9099501559897 1639.90831490379 59.534 3 -0.08708045207675666 0.02331895863280626 0.9438714419765777 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'MLXIPL|p.A789Qfs*28|1|0.14|ENSG00000009950|chr7:73594349-73594349|C/-|frameshift_variant', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL'] 130589 6736 VVAAHLAGA True PC9_epitope_Rep5 807.46028720467 807.45918993586 30.881 2 -0.08708738076524532 0.02331895863280626 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 118857 4188 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 21.227 2 -0.08709776808156879 0.02331895863280626 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 66928 21585 LSYGQEVLI True PC9_epitope_Rep4 1020.5491617787198 1020.54806993586 91.209 2 -0.08711721258465276 0.02331895863280626 0.9438714419765777 ['ENSG00000254656|ENST00000649591|RTL1'] 2750 5329 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 25.56 2 -0.08712000828122371 0.02331895863280626 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 130204 15662 VTSAYQVP True PC9_epitope_Rep1 863.4388830537499 863.43778993586 65.064 2 -0.08713565605940839 0.02333705980994969 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant'] 58164 13365 LESIDDALA True H1975_Epitope_Rep2 945.46549172441 945.46494496793 56.541 1 -0.08715340410762298 0.02333705980994969 0.9438714419765777 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 46739 12252 IVAPGKGILAA True PC9_epitope_Rep6 1008.6331661861998 1008.63206993586 58.505 2 -0.08715612866700821 0.02333705980994969 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 127118 12618 VQDDPRLVHL True PC9_epitope_Rep5 1190.64077074778 1190.6391149037902 53.537 3 -0.08717169758112375 0.02333705980994969 0.9438714419765777 ['ENST00000473976.1_1_6:31937656-31938043:-|nuORF', 'ENST00000485557.5_1_6:31937656-31938645:-|nuORF', 'ENSG00000204348|ENST00000337523|DXO'] 97564 11979 SGVSLAALK True PC9_epitope_Rep1 844.50181766348 844.50072993586 50.939 2 -0.08721553068572402 0.023348633007383757 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 140304 14616 YYDPKHVIF True PC9_epitope_Rep2 1180.59169529704 1180.5900449037902 61.489 3 -0.08723499688396667 0.023348633007383757 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 42095 15826 IEEKIVDNL True PC9_epitope_Rep1 1071.58119018299 1071.58008993586 65.688 2 -0.08724973884298447 0.023348633007383757 0.9438714419765777 ['nc|ENSG00000127125|Q9HAB8-2|PPCS', 'ENSG00000127125|ENST00000372561|PPCS'] 2826 16628 AEVISLFSA True H1975_Epitope_Rep3 935.49639792987 935.49530993586 69.467 2 -0.08726936837337876 0.023348633007383757 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 77117 4910 NYARGHYTI True NCI_RA007_Epitope_Rep5 1093.5304920228102 1093.52938993586 25.579 2 -0.08727066847430597 0.023348633007383757 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 136616 14768 YIDDVFHAL True NCI_RA007_Epitope_Rep4 1091.52876068731 1091.52766993586 64.264 2 -0.0872857275418918 0.023348633007383757 0.9438714419765777 ['ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1', 'nc|ENSG00000143622|Q92963-2|RIT1'] 26892 22446 FLFSKFIEL True PC9_epitope_Rep2 1142.6375828603 1142.63648993586 91.827 2 -0.08731866045445755 0.023348633007383757 0.9438714419765777 ['nc|ENSG00000066322|Q9BW60-2|ELOVL1', 'ENSG00000066322|ENST00000372458|ELOVL1', 'ENST00000470968.6_1_1:43829589-43833598:-|nuORF', 'ENST00000496932.1_1_1:43830369-43830754:-|nuORF', 'ENST00000468865.6_1_1:43829752-43830910:-|nuORF', 'ENST00000464204.5_1_1:43830107-43833598:-|nuORF'] 59516 16397 LGPRLVLA True PC9_epitope_Rep5 837.5436229058099 837.54252993586 68.07 2 -0.08732012820226859 0.023348633007383757 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 129993 19563 VTPGSGYLSL True PC9_epitope_Rep5 992.51786165044 992.51676993586 80.299 2 -0.08734921095560272 0.023348633007383757 0.9438714419765777 ['ENST00000262644.8_1_8:57872809-57872962:-|nuORF'] 83841 8546 QEFVRALAA True NCI_RA007_Epitope_Rep3 1003.5450794577897 1003.5439899358599 40.687 2 -0.08738898165393245 0.023348633007383757 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 18265 7696 EITALAHSTMK True NCI_RA007_Epitope_Rep2 1200.61725842188 1200.6161699358602 34.562 2 -0.0874049149352616 0.023348633007383757 0.9438714419765777 ['ACTA1|p.P324H|1|0.35|ENSG00000143632|chr1:229431740-229431740|G/T|missense_variant'] 136331 18396 YHADPSLVSF True PC9_epitope_Rep1 1134.53457434374 1134.53346993586 75.55 2 -0.08745271962179939 0.023348633007383757 0.9438714419765777 ['nc|ENSG00000078900|O15350-11|TP73', 'nc|ENSG00000078900|O15350-8|TP73', 'ENSG00000078900|ENST00000378295|TP73'] 47205 16269 IYAPPLPSL True NCI_RA007_Epitope_Rep4 969.55351888317 969.55242993586 70.556 2 -0.08745645436670434 0.023348633007383757 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1'] 126114 11794 VPEFVHNVA True PC9_epitope_Rep4 1010.5185303567799 1010.51742993586 53.135 2 -0.08747505534756587 0.023348633007383757 0.9438714419765777 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.M758Sfs*26|1|0.14|ENSG00000170921|chr17:63355299-63355303|GACAT/-|frameshift_variant'] 96501 5594 SELEERRLP True H1975_Epitope_Rep3 1127.59348620219 1127.5918349037902 26.557 3 -0.08747604839970816 0.023348633007383757 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000575323.1_1_16:3580476-3582910:+|nuORF'] 99149 12194 SLANNVTSV True PC9_epitope_Rep2 903.46616043075 903.46506993586 52.217 2 -0.08752083558331658 0.023348633007383757 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2'] 63579 23077 LPLLIAPALAA True PC9_epitope_Rep3 1061.68486740589 1061.68376993586 94.034 2 -0.08755194588815733 0.023348633007383757 0.9438714419765777 ['ENSG00000168140|ENST00000304735|VASN'] 17234 12846 EHAKFLNSL True PC9_epitope_Rep1 1057.5556441414901 1057.5545499358602 54.286 2 -0.08759781180225086 0.023348633007383757 0.9438714419765777 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10'] 8574 7965 AVADTVYRA True PC9_epitope_Rep5 964.4977949122 964.49668993586 35.578 2 -0.08778423552846086 0.023367656449553003 0.9438714419765777 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 124304 8649 VLDLEEELEK True NCI_RA007_Epitope_Rep1 1215.6234489177898 1215.62234993586 37.644 2 -0.08783974441052439 0.023367656449553003 0.9438714419765777 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113931616-113943025:+|nuORF'] 39006 5234 HKFAGDKGYL True NCI_RA007_Epitope_Rep4 1134.5821932425 1134.58054490379 26.669 3 -0.08786276826060875 0.02338574507143427 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10', 'ENST00000478574.5_1_1:151956596-151958706:-|nuORF', 'ENST00000478348.1_1_1:151957748-151958706:-|nuORF'] 88344 15031 QYLRVETQF True PC9_epitope_Rep4 1182.6033226099 1182.6022299358601 65.75 2 -0.08788498246447372 0.02338574507143427 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 76851 21549 NVIDNLIVA True PC9_epitope_Rep5 969.5494961318899 969.5489449679301 87.926 1 -0.08788828496950979 0.02338574507143427 0.9438714419765777 ['ENSG00000143621|ENST00000361891|ILF2'] 72809 16590 NAIGSASVVTV True PC9_epitope_Rep5 1016.55022440788 1016.54912993586 68.819 2 -0.08793379007624204 0.02338574507143427 0.9438714419765777 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF'] 56722 13345 LEAHFVPLV True H1975_Epitope_Rep1 1023.5753169569099 1023.57420993586 56.439 2 -0.08798623632798348 0.02340289693148717 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF', 'PPP2R1A|p.D123N|1|0.1|ENSG00000105568|chr19:52211356-52211356|G/A|missense_variant'] 127212 22385 VQIDGLVVL True PC9_epitope_Rep2 954.5749826037398 954.57388993586 91.599 2 -0.08798714073881929 0.02340289693148717 0.9438714419765777 ['ENSG00000147677|ENST00000521861|EIF3H', 'ENST00000518034.5_1_8:117671049-117768048:-|nuORF', 'EIF3H|p.K48E|1|0.13|ENSG00000147677|chr8:116726163-116726163|T/C|missense_variant', 'EIF3H|p.E217Nfs*30|1|0.19|ENSG00000147677|chr8:116655914-116655914|C/-|frameshift_variant'] 58346 7114 LEVAKSLSA True H1975_Epitope_Rep2 916.5229470308799 916.52184993586 32.296 2 -0.08799434888277595 0.02340289693148717 0.9438714419765777 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 129190 18795 VTDGGALVVV True PC9_epitope_Rep5 928.52294703088 928.52184993586 77.307 2 -0.08806003760216163 0.02340289693148717 0.9438714419765777 ['EEF2|p.G124dup|1|0.11|ENSG00000167658|chr19:3983136-3983137|-/CGC|inframe_insertion'] 9460 11718 AVWGGSCSAP True PC9_epitope_Rep1 933.4014519992099 933.40034993586 49.949 2 -0.08806993801633706 0.02340289693148717 0.9438714419765777 ['ENST00000266087.11_1_22:32870816-32870993:+|nuORF'] 20213 19488 ENTLQLVRNI True PC9_epitope_Rep2 1198.6669854956199 1198.6658899358602 80.342 2 -0.08811023908957483 0.02340289693148717 0.9438714419765777 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 62418 19023 LLSAALALY True H1975_Epitope_Rep1 933.55351888317 933.55297496793 79.302 1 -0.08823284217523936 0.02342004468560485 0.9438714419765777 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD'] 5654 9453 APAKSLVGQVA True PC9_epitope_Rep1 1039.6025943339098 1039.6014899358602 41.217 2 -0.08826253365116464 0.02342004468560485 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 63008 18829 LNGQLPLN True PC9_epitope_Rep3 867.48141657207 867.4808649679301 77.649 1 -0.08826755024500993 0.02342004468560485 0.9438714419765777 ['ENSG00000189108|ENST00000372582|IL1RAPL2', 'IL1RAPL2|p.T647K|1|0.35|ENSG00000189108|chrX:105767540-105767540|C/A|missense_variant'] 130578 6835 VVAAHLAGA True PC9_epitope_Rep1 807.46028720467 807.45918993586 31.097 2 -0.08831758475851845 0.02342004468560485 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 118291 7044 VDASPGPGL True H1975_Epitope_Rep2 811.4075829254699 811.40703496793 32.019 1 -0.08832506461872679 0.02342004468560485 0.9438714419765777 ['ENSG00000106780|ENST00000373930|MEGF9'] 102287 6415 SPVASTTPSA True PC9_epitope_Rep5 916.45017601344 916.44906993586 29.652 2 -0.08832800903853284 0.02342004468560485 0.9438714419765777 ['ENSG00000166825|ENST00000300060|ANPEP'] 129170 11572 VTDELPLP True H1975_Epitope_Rep2 882.4698488288599 882.46930496793 49.576 1 -0.08837897148472061 0.023457134878525552 0.9438714419765777 ['ENSG00000018408|ENST00000360632|WWTR1'] 43862 17295 ILDDSHLLV True PC9_epitope_Rep6 1023.56006081559 1023.5589699358601 79.13 2 -0.08839645828305832 0.023457134878525552 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR'] 99345 12923 SLDRQLTGL True PC9_epitope_Rep4 1001.55055876105 1001.54946993586 57.593 2 -0.08840858564889222 0.023457134878525552 0.9438714419765777 ['ENSG00000168434|ENST00000307149|COG7'] 98416 23591 SIIPPLFTV True PC9_epitope_Rep1 985.58481901145 985.58427496793 95.531 1 -0.08841313292152009 0.023457134878525552 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 8685 19795 AVDAFFTAV True PC9_epitope_Rep6 939.4701831820299 939.46908993586 88.798 2 -0.08844950568042102 0.023457134878525552 0.9438714419765777 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 30121 12009 FYQEHPDL True PC9_epitope_Rep3 1047.4661604307498 1047.4650699358601 51.218 2 -0.08850133430969095 0.023457134878525552 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 24318 12233 FADGHVLEL True NCI_RA007_Epitope_Rep4 999.5025459394699 999.50144993586 54.049 2 -0.08853488021223103 0.023474740222182332 0.9438714419765777 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 47973 3971 KAFNQGKIFK True NCI_RA007_Epitope_Rep5 1179.67642798051 1179.67477490379 21.636 3 -0.08853905639205344 0.023474740222182332 0.9438714419765777 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF'] 102769 3902 SQEGRPVQV True PC9_epitope_Rep6 998.5145076054997 998.51340993586 21.676 2 -0.08854164566381523 0.023474740222182332 0.9438714419765777 ['ENSG00000168090|ENST00000303904|COPS6', 'COPS6|p.T192Rfs*27|1|0.24|ENSG00000168090|chr7:100091076-100091077|CA/-|frameshift_variant', 'ENST00000496358.1_1_7:99686670-99688376:+|nuORF'] 138364 9148 YRDGHLVNL True PC9_epitope_Rep4 1085.56179215109 1085.5606899358602 42.779 2 -0.08860796920620823 0.023474740222182332 0.9438714419765777 ['ENST00000585105.5_1_17:73482215-73489290:+|nuORF', 'ENST00000581085.5_1_17:73467944-73489290:+|nuORF', 'ENSG00000177728|ENST00000314256|TMEM94', 'nc|ENSG00000177728|Q12767-3|TMEM94', 'nc|ENSG00000177728|Q12767-2|TMEM94'] 106857 16381 SYIEHIFEI True NCI_RA007_Epitope_Rep1 1149.57062549929 1149.57007496793 67.832 1 -0.08871138070566044 0.023474740222182332 0.9438714419765777 ['ENSG00000162734|ENST00000360472|PEA15', 'nc|ENSG00000162734|Q15121-2|PEA15'] 138 8161 AADDSKLVL True NCI_RA007_Epitope_Rep3 930.5022115863 930.50110993586 39.219 2 -0.0887471922954703 0.023494216194654968 0.9438714419765777 ['nc|ENSG00000153046|Q9Y232-3|CDYL', 'ENST00000472453.5_1_6:4776866-4954287:+|nuORF', 'nc|ENSG00000153046|Q9Y232-4|CDYL', 'ENSG00000172352|ENST00000382407|CDY1B', 'ENSG00000182415|ENST00000250838|CDY2A', 'ENSG00000129873|ENST00000382867|CDY2B', 'ENSG00000153046|ENST00000397588|CDYL', 'ENSG00000172288|ENST00000306609|CDY1', 'nc|ENSG00000153046|Q9Y232|CDYL'] 9957 8098 AYRQGHFTY True PC9_epitope_Rep3 1141.53049202281 1141.52938993586 36.127 2 -0.08877617000464508 0.02353363514888016 0.9438714419765777 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 80641 18379 PLPPLPPPP True PC9_epitope_Rep3 923.5480395799099 923.54694993586 75.903 2 -0.08877648049843534 0.02355310916995732 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 131310 13004 VVQVAQIV True NCI_RA007_Epitope_Rep5 854.5225531080599 854.52200496793 56.698 1 -0.08878413416154507 0.02356788228022252 0.9438714419765777 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 28812 14693 FTDGDAALEF True H1975_Epitope_Rep3 1084.4713053808398 1084.47020993586 61.888 2 -0.08880396884909526 0.02356788228022252 0.9438714419765777 ['ENSG00000173545|ENST00000308683|ZNF622'] 5201 13053 ALPRGFLSP True PC9_epitope_Rep4 956.5443511817999 956.54324993586 58.103 2 -0.08881141418441564 0.02356788228022252 0.9438714419765777 ['nc|ENSG00000167566|Q9HCH0-4|NCKAP5L', 'ENST00000491441.1_1_12:50196735-50197827:-|nuORF'] 18997 22024 ELGELLLSL True PC9_epitope_Rep2 985.56956287013 985.56846993586 90.186 2 -0.0888526955308069 0.02356788228022252 0.9438714419765777 ['ENSG00000103528|ENST00000355377|SYT17'] 26535 21429 FIVEETLPL True PC9_epitope_Rep4 1059.58521293427 1059.5841099358602 90.602 2 -0.08893018169070185 0.02356788228022252 0.9438714419765777 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 84822 11588 QHLLDTNQL True PC9_epitope_Rep6 1080.5563724174801 1080.55526993586 55.687 2 -0.08894067046837456 0.02356788228022252 0.9438714419765777 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF', 'EHF|p.D69V|2|0.38|ENSG00000135373|chr11:34646547-34646547|A/T|missense_variant'] 116853 15815 TYNEPGSQVF True PC9_epitope_Rep2 1140.50875351872 1140.5076499358602 66.092 2 -0.08895324284620611 0.02356788228022252 0.9438714419765777 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.W992Mfs*12|1|0.31|ENSG00000163939|chr3:52587502-52587503|-/T|frameshift_variant', 'PBRM1|p.P1361Hfs*23|1|0.28|ENSG00000163939|chr3:52563287-52563287|G/-|frameshift_variant'] 34848 9254 GQVGGQVSV True PC9_epitope_Rep3 829.42938099921 829.42828993586 40.541 2 -0.08897134990836654 0.02356788228022252 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 13859 12294 DRATLAAL True PC9_epitope_Rep3 829.4657665079299 829.46521496793 52.315 1 -0.08898630229877708 0.02356788228022252 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 34692 18482 GQLSDLVVV True PC9_epitope_Rep2 928.52294703088 928.52239496793 76.425 1 -0.08902179745978667 0.02356788228022252 0.9438714419765777 ['ENST00000511288.1_1_17:48545715-48548505:+|nuORF', 'ENST00000506085.5_1_17:48545715-48551043:+|nuORF'] 88310 21015 QYLDVLHAL True PC9_epitope_Rep5 1070.5760452329 1070.57494993586 85.891 2 -0.08905390574758908 0.02356788228022252 0.9438714419765777 ['ENST00000607532.5_1_6:13307806-13327130:-|nuORF', 'nc|ENSG00000145979|Q9P0N9-4|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-2|TBC1D7', 'ENSG00000145979|ENST00000379300|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-3|TBC1D7'] 34838 9280 GQVGGQVSV True PC9_epitope_Rep1 829.42938099921 829.42883496793 40.55 1 -0.08910768273504523 0.023587350959046138 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 44022 15070 ILKNYSFP True PC9_epitope_Rep1 980.53311779176 980.53202993586 62.786 2 -0.08917615272258313 0.02360681886152926 0.9438714419765777 ['ENST00000589328.5_1_18:43565082-43565232:-|nuORF'] 116877 6248 TYNQKHSLF True NCI_RA007_Epitope_Rep4 1136.5614577979202 1136.55982490379 30.638 3 -0.08919330628542882 0.02362534391323418 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 11609 11912 DHAQESLSL True PC9_epitope_Rep5 998.4668887067401 998.46578993586 50.817 2 -0.08920996619467492 0.02362534391323418 0.9438714419765777 ['nc|ENSG00000010072|Q9H040-3|SPRTN', 'nc|ENSG00000010072|Q9H040-2|SPRTN', 'ENSG00000010072|ENST00000295050|SPRTN', 'ENST00000492437.1_1_1:231474120-231475626:+|nuORF'] 104692 3285 STARLWDHKK True NCI_RA007_Epitope_Rep4 1240.6676542019597 1240.66600490379 18.329 3 -0.08923745226725806 0.02362534391323418 0.9438714419765777 ['ENST00000529974.1_1_11:88068229-88070878:-|nuORF'] 20836 13431 EQPYKWEKF True PC9_epitope_Rep5 1253.6080736371698 1253.6069699358602 56.678 2 -0.08929037711620723 0.023643866749068 0.9438714419765777 ['nc|ENSG00000213096|O75437-2|ZNF254', 'ENSG00000213096|ENST00000357002|ZNF254'] 24097 15950 EYRPEFSNF True PC9_epitope_Rep4 1187.5247379360299 1187.52364993586 69.281 2 -0.08929957572949336 0.023643866749068 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4', 'ENST00000446672.2_1_13:19931694-19949148:+|nuORF'] 103763 16285 SRFPEALRL True PC9_epitope_Rep1 1087.61382772395 1087.6127299358602 67.458 2 -0.08934849031255873 0.023643866749068 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 103574 11721 SRDGALEL True PC9_epitope_Rep1 859.43994568291 859.43884993586 49.96 2 -0.08946107841106514 0.023660972352343174 0.9438714419765777 ['CON__Q2UVX4'] 5852 8294 APGKGILAA True PC9_epitope_Rep3 796.4806882960798 796.47958993586 36.876 2 -0.08946450813390334 0.023660972352343174 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 8811 21498 AVFPFQPGSV True PC9_epitope_Rep2 1047.53893144819 1047.5378299358601 88.162 2 -0.0894815905823959 0.023660972352343174 0.9438714419765777 ['ENSG00000100097|ENST00000215909|LGALS1', 'ENST00000425542.5_1_22:38072875-38075753:+|nuORF', 'ENST00000472321.1_1_22:38074415-38075753:+|nuORF'] 116916 13740 TYPDVNNSI True PC9_epitope_Rep4 1021.4716397340101 1021.47107496793 60.748 1 -0.08953554074299623 0.023660972352343174 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 96995 17758 SEVNLFLVP True NCI_RA007_Epitope_Rep3 1016.5542471591599 1016.55314993586 77.864 2 -0.08953630494246663 0.023660972352343174 0.9438714419765777 ['ENSG00000105771|ENST00000270066|SMG9', 'nc|ENSG00000105771|Q9H0W8-2|SMG9'] 53520 16288 KVPEIEVTV True PC9_epitope_Rep5 1012.5804619069999 1012.57936993586 67.645 2 -0.08955827772894805 0.023660972352343174 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 130632 9061 VVAGVAAE True PC9_epitope_Rep6 714.39120458534 714.39065496793 44.915 1 -0.08956508009845357 0.02367382726874178 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 80766 14566 PLSIAVEAA True H1975_Epitope_Rep3 869.4858332461699 869.48528496793 61.396 1 -0.08963500318870603 0.02367382726874178 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000466876.1_1_3:195006441-195012466:-|nuORF'] 55157 9974 LANLSFAD True H1975_Epitope_Rep3 849.42323298961 849.4226849679301 43.4 1 -0.08967009283637799 0.02367382726874178 0.9438714419765777 ['ENSG00000280204|ENST00000641544|OR1S1', 'nc|ENSG00000280204|Q8NH92|OR1S1', 'OR1S1|p.M94Cfs*3|1|0.18|ENSG00000280204|chr11:58215017-58215017|C/-|frameshift_variant', 'OR1S1|p.T130Pfs*14|1|0.56|ENSG00000280204|chr11:58215132-58215132|A/-|frameshift_variant'] 84637 14698 QHEEFVTSL True PC9_epitope_Rep1 1088.51383889916 1088.51274993586 61.356 2 -0.0896904737045649 0.02367382726874178 0.9438714419765777 ['ENSG00000085872|ENST00000546361|CHERP'] 134999 11252 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.38026993586 48.16 2 -0.08973164307899789 0.02367382726874178 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 44770 6725 IPTDNQIKA True PC9_epitope_Rep2 998.53965972418 998.53856993586 31.278 2 -0.08974374625023507 0.02367382726874178 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1'] 124923 14695 VLLTGLHAV True PC9_epitope_Rep6 921.5647522732099 921.56364993586 68.458 2 -0.08976141735873447 0.02367382726874178 0.9438714419765777 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3', 'ENST00000477675.1_1_22:22055420-22058252:-|nuORF', 'ENSG00000175155|ENST00000312655|YPEL2', 'ENSG00000100027|ENST00000339468|YPEL1'] 127117 12683 VQDDPRLVHL True PC9_epitope_Rep1 1190.64077074778 1190.6391149037902 53.656 3 -0.08978342775161452 0.02367382726874178 0.9438714419765777 ['ENST00000473976.1_1_6:31937656-31938043:-|nuORF', 'ENST00000485557.5_1_6:31937656-31938645:-|nuORF', 'ENSG00000204348|ENST00000337523|DXO'] 84629 13679 QHDPYITSI True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 57.685 2 -0.08978528783588 0.02367382726874178 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 29412 21168 FVFPGELLL True NCI_RA007_Epitope_Rep4 1033.5848190114498 1033.5837299358602 91.785 2 -0.08980739172625249 0.02367382726874178 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 140496 21267 YYIFIPSKF True PC9_epitope_Rep5 1176.6219327961599 1176.62029490379 86.854 3 -0.08983118594977064 0.02367382726874178 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 6426 9569 APSGNYVAC True PC9_epitope_Rep1 880.3749028981999 880.37380993586 41.665 2 -0.08983648161427785 0.02367382726874178 0.9438714419765777 ['ENSG00000114450|ENST00000232564|GNB4'] 139269 12832 YTDFPCQY True H1975_Epitope_Rep2 1035.40078329287 1035.3996899358601 54.467 2 -0.08984091374296992 0.02367382726874178 0.9438714419765777 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 34481 9177 GQDGQLKGF True PC9_epitope_Rep3 948.4664947839199 948.46538993586 40.239 2 -0.08984232235276876 0.02367382726874178 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 66975 18610 LTAAATLSV True PC9_epitope_Rep6 845.48583324617 845.48528496793 84.226 1 -0.08986272020163881 0.02367382726874178 0.9438714419765777 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 106783 14181 SYGDILHVI True NCI_RA007_Epitope_Rep3 1015.53384606775 1015.53274993586 63.073 2 -0.08987878852263197 0.023691866257522017 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3', 'ENST00000466140.5_1_X:69698992-69715274:+|nuORF'] 126161 20904 VPFPTPLEA True PC9_epitope_Rep3 969.5171333744498 969.51602993586 85.682 2 -0.09000851945882175 0.023691866257522017 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 47349 10779 IYHNPTANSF True PC9_epitope_Rep3 1162.54072235334 1162.5396299358601 46.42 2 -0.09001707995829272 0.023691866257522017 0.9438714419765777 ['ENSG00000125753|ENST00000245932|VASP', 'VASP|p.Q37K|1|0.3|ENSG00000125753|chr19:45517766-45517766|C/A|missense_variant', 'ENST00000586619.1_1_19:46010999-46025451:+|nuORF'] 116639 17612 TYIKFINLF True NCI_RA007_Epitope_Rep5 1157.6484818971699 1157.64738993586 74.527 2 -0.09010454027012722 0.023691866257522017 0.9438714419765777 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50303271-50309027:+|nuORF'] 95203 13710 SAAMPGASL True PC9_epitope_Rep3 803.38473930591 803.3841949679301 57.816 1 -0.0901550404986395 0.023711319664454937 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 130030 19188 VTPRQFFNV True PC9_epitope_Rep1 1106.58727862294 1106.5861899358601 78.601 2 -0.09020474889926501 0.023726990198422185 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 130577 6744 VVAAHLAGA True PC9_epitope_Rep1 807.46028720467 807.45918993586 30.746 2 -0.09020894973173771 0.023726990198422185 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 47343 5709 IYHHTGNNTF True PC9_epitope_Rep1 1202.5468703629401 1202.54521490379 26.78 3 -0.0902290523377009 0.023726990198422185 0.9438714419765777 ['nc|ENSG00000154380|Q8N8S7-3|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7|ENAH'] 107377 18472 SYSMIVNNL True PC9_epitope_Rep6 1039.50083168731 1039.4997299358602 83.693 2 -0.09024277859371617 0.023726990198422185 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 130633 15157 VVAGVANALA True PC9_epitope_Rep3 883.5127167003499 883.51160993586 63.444 2 -0.09037619444479378 0.023726990198422185 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070', 'HBB|p.H144R|1|0.35|ENSG00000244734|chr11:5225611-5225611|T/C|missense_variant'] 131754 23456 VYADGIFDLF True PC9_epitope_Rep4 1158.55972646242 1158.5586299358602 98.511 2 -0.09038507630716851 0.023726990198422185 0.9438714419765777 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B'] 26758 9562 FLDHKTLYY True H1975_Epitope_Rep2 1198.60225998074 1198.60060490379 41.754 3 -0.09041484750763405 0.023726990198422185 0.9438714419765777 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'ENST00000444292.2_1_X:95228575-95229244:-|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5', 'nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7'] 75337 7579 NPYYGGESA True PC9_epitope_Rep6 956.3875757568799 956.38646993586 38.426 2 -0.09042250489120404 0.023726990198422185 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 492 5719 AAPAEEPAAAA True PC9_epitope_Rep4 967.4610750503098 967.45996993586 28.82 2 -0.0904468673633923 0.023726990198422185 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 17036 11990 EGLVQELQKKA True NCI_RA007_Epitope_Rep5 1241.6979512707296 1241.6968499358602 52.78 2 -0.0905368459637528 0.023745492938106336 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 130591 5171 VVAAHLAGA True PC9_epitope_Rep6 807.46028720467 807.45918993586 27.63 2 -0.09056458681289431 0.023745492938106336 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 25416 5411 FEKPDSVAA True H1975_Epitope_Rep2 962.4709114580198 962.46980993586 25.843 2 -0.0905811649185817 0.023745492938106336 0.9438714419765777 ['ENST00000482023.5_1_1:249144411-249145095:-|nuORF', 'ENST00000533927.5_1_1:249144411-249149911:-|nuORF', 'nc|ENSG00000171163|Q9BU19-3|ZNF692', 'nc|ENSG00000171163|Q9BU19-2|ZNF692', 'ENSG00000171163|ENST00000306601|ZNF692', 'nc|ENSG00000171163|Q9BU19-5|ZNF692'] 28376 9510 FSDPESQTL True NCI_RA007_Epitope_Rep3 1022.4556553167 1022.45454993586 44.501 2 -0.090644990520919 0.02376115360101976 0.9438714419765777 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'nc|ENSG00000114316|Q13107-3|USP4'] 102091 8839 SPPVPGPSA True PC9_epitope_Rep1 807.41266830591 807.41156993586 38.841 2 -0.09066972956746415 0.02376115360101976 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 33647 19106 GLNTATILLL True PC9_epitope_Rep4 1027.62774645259 1027.62664993586 81.583 2 -0.09068267031872915 0.02376115360101976 0.9438714419765777 ['CENPM|p.V21L|1|0.22|ENSG00000100162|chr22:41946493-41946493|C/A|missense_variant'] 27773 7202 FQEENTEKL True PC9_epitope_Rep4 1136.5349682665599 1136.5338699358601 35.005 2 -0.09072374769580316 0.02376115360101976 0.9438714419765777 ['ENST00000584289.5_1_17:65341859-65362635:-|nuORF', 'nc|ENSG00000197170|O00232-2|PSMD12', 'ENSG00000197170|ENST00000356126|PSMD12'] 87818 20056 QVIPQFQTV True PC9_epitope_Rep3 1058.5760452328998 1058.57547496793 82.396 1 -0.09075338379380811 0.02376115360101976 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 39605 11293 HPLLGVSA True PC9_epitope_Rep3 792.4493881678001 792.4488349679301 48.444 1 -0.09075997707613069 0.02376115360101976 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 61254 12133 LLDRLRVPP True H1975_Epitope_Rep3 1077.66586329681 1077.66476993586 51.838 2 -0.09077312623609936 0.02376115360101976 0.9438714419765777 ['ENST00000468819.1_1_3:195606029-195638730:-|nuORF'] 2822 16650 AEVISLFSA True H1975_Epitope_Rep1 935.49639792987 935.49530993586 69.432 2 -0.09080825051061342 0.02376115360101976 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 88068 17702 QVVGGIYGV True PC9_epitope_Rep4 890.4861675993399 890.48506993586 76.115 2 -0.09080907081685913 0.02376115360101976 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 69656 15744 LVVSTQTALA True PC9_epitope_Rep2 1001.5757108797299 1001.5746099358599 65.829 2 -0.09083067376090434 0.023776808650457018 0.9438714419765777 ['CON__P02769'] 69312 14727 LVPPDQPEV True PC9_epitope_Rep3 992.51786165044 992.51676993586 61.785 2 -0.0908759713824321 0.023776808650457018 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 31809 9677 GEM[Oxidation]EPPALP True H1975_Epitope_Rep2 955.4320838015898 955.43098993586 42.203 2 -0.09088145369896611 0.023776808650457018 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 132390 14296 VYNENLVHM True PC9_epitope_Rep5 1117.52262976105 1117.5215299358601 59.993 2 -0.09089281226977472 0.023776808650457018 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 121710 15600 VGLPVLAQ True PC9_epitope_Rep6 795.48543932335 795.48489496793 72.212 1 -0.09095036371969938 0.023776808650457018 0.9438714419765777 ['ENST00000572652.5_1_17:78195046-78195277:+|nuORF'] 106162 8232 SVPEEFHTT True PC9_epitope_Rep2 1045.47163973401 1045.4705499358602 37.021 2 -0.09095321815660143 0.023776808650457018 0.9438714419765777 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 93485 10513 RSHLLVLV True NCI_RA007_Epitope_Rep2 935.59163572739 935.59052993586 45.489 2 -0.09095755508052708 0.023776808650457018 0.9438714419765777 ['ENST00000272793.9_1_2:170734066-170735040:+|nuORF'] 140641 18175 YYPAQGVQQF True PC9_epitope_Rep1 1199.56112344475 1199.56002993586 74.7 2 -0.09096546217675279 0.023776808650457018 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1'] 123776 12090 VISQPDQTL True PC9_epitope_Rep6 999.5236753068699 999.52256993586 57.831 2 -0.09098873289382836 0.023776808650457018 0.9438714419765777 ['nc|ENSG00000123505|P17707-2|AMD1', 'ENSG00000123505|ENST00000368885|AMD1'] 24491 16814 FAIPLIEKL True NCI_RA007_Epitope_Rep4 1042.64266824074 1042.6415699358602 72.854 2 -0.09109230506697796 0.02381521306252489 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 112981 13887 TPSPIISP True PC9_epitope_Rep6 810.4487194614601 810.4481749679301 65.253 1 -0.0910934058609796 0.02381521306252489 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17'] 132052 16796 VYIGSTLSYF True NCI_RA007_Epitope_Rep3 1148.5753765265601 1148.57426993586 73.918 2 -0.091120135152818 0.02381521306252489 0.9438714419765777 ['nc|ENSG00000089041|Q99572-7|P2RX7', 'nc|ENSG00000089041|Q99572-5|P2RX7', 'nc|ENSG00000089041|Q99572-6|P2RX7', 'ENST00000539606.5_1_12:121592718-121615069:+|nuORF', 'nc|ENSG00000089041|Q99572-2|P2RX7', 'nc|ENSG00000089041|Q99572-4|P2RX7', 'nc|ENSG00000089041|Q99572-8|P2RX7', 'ENST00000538011.5_1_12:121592718-121622602:+|nuORF', 'ENSG00000089041|ENST00000328963|P2RX7'] 58520 21618 LFAGFENFLL True PC9_epitope_Rep3 1169.61209638845 1169.61098993586 88.45 2 -0.09123776598711686 0.02383417625741707 0.9438714419765777 ['ENSG00000188269|ENST00000322301|OR7A5'] 17476 10602 EHGPENIVM True PC9_epitope_Rep2 1024.46478053176 1024.4636899358602 46.096 2 -0.09126242603128963 0.02383417625741707 0.9438714419765777 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 123170 11447 VHGPPVQL True PC9_epitope_Rep3 845.47593726881 845.47484993586 49.029 2 -0.09131743487517727 0.02387209811651336 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 6738 20916 AQDGSFWNV True PC9_epitope_Rep1 1022.4457593393399 1022.44517496793 85.274 1 -0.0913513303132608 0.02387209811651336 0.9438714419765777 ['ENST00000295767.9_1_3:14163506-14166176:-|nuORF'] 70501 21159 LYTEAIKFF True PC9_epitope_Rep1 1130.60119735158 1130.60010993586 86.222 2 -0.09137048406416336 0.02387209811651336 0.9438714419765777 ['ENSG00000038532|ENST00000409790|CLEC16A', 'nc|ENSG00000038532|Q2KHT3-2|CLEC16A'] 62734 12992 LLYLC[Carbamidomethyl]GGDD True H1975_Epitope_Rep3 1024.4535474211498 1024.45297496793 55.207 1 -0.09137184527923611 0.02387209811651336 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 23236 12340 EVRAQYEEI True PC9_epitope_Rep4 1135.5509526838698 1135.54984993586 55.274 2 -0.09138374897166655 0.02388392412873435 0.9438714419765777 ['CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013', 'CON__Q9R0H5'] 77800 19535 PAEPAFLA True PC9_epitope_Rep1 814.4225047136199 814.4219549679301 79.964 1 -0.09141391934384961 0.02388392412873435 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 34861 9241 GQVGGQVSV True PC9_epitope_Rep5 829.42938099921 829.42883496793 40.492 1 -0.09142927688564889 0.02388392412873435 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 102607 22075 SQAPFIVAL True PC9_epitope_Rep5 944.5331177917599 944.53256496793 89.94 1 -0.09144428750467172 0.02388392412873435 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 114961 19056 TTIGDITLS True PC9_epitope_Rep2 919.4862271689901 919.48512993586 78.664 2 -0.09145212891982543 0.02388392412873435 0.9438714419765777 ['ENST00000462363.6_1_1:198608398-198672548:+|nuORF'] 105106 9806 STLPAITLK True NCI_RA007_Epitope_Rep3 942.5749826037401 942.57388993586 45.635 2 -0.09148828522960815 0.02388392412873435 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 101919 17559 SPLLSLPAS True PC9_epitope_Rep6 883.50148331031 883.50038993586 80.18 2 -0.09149139786390041 0.02388392412873435 0.9438714419765777 ['ENST00000519757.5_1_5:179294406-179298488:-|nuORF'] 33018 9838 GIYAYGFEK True NCI_RA007_Epitope_Rep4 1046.50729696674 1046.5061899358602 44.689 2 -0.0915057889574017 0.02388392412873435 0.9438714419765777 ['ENSG00000141543|ENST00000649764|EIF4A3', 'ENST00000465222.1_1_3:186502277-186502505:+|nuORF', 'ENST00000485101.5_1_3:186501384-186502505:+|nuORF', 'ENST00000486805.5_1_3:186501384-186502505:+|nuORF', 'ENST00000584054.5_1_17:7476159-7478064:+|nuORF', 'ENST00000467585.1_1_3:186502182-186503751:+|nuORF', 'ENST00000575957.1_1_17:78115565-78120760:-|nuORF', 'ENST00000582848.5_1_17:7476159-7480015:+|nuORF', 'ENST00000584901.5_1_17:7476159-7480015:+|nuORF', 'nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000584712.5_1_17:7476159-7478717:+|nuORF', 'ENST00000580461.5_1_17:7476163-7478717:+|nuORF'] 56096 9982 LDLLPPSELHA True H1975_Epitope_Rep1 1203.64993844915 1203.6488499358602 43.33 2 -0.0915103949364889 0.02388392412873435 0.9438714419765777 ['ENST00000360085.6_1_17:42043665-42081769:-|nuORF'] 29091 10203 FTQGHIVEV True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 49.888 2 -0.09154654392446723 0.02388392412873435 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'ENST00000479783.1_1_2:237233333-237240271:-|nuORF'] 119007 5725 VEFRNYCLRYR True H1975_Epitope_Rep1 1517.75615193653 1517.7544949037901 27.09 3 -0.09155749124965386 0.02388392412873435 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 46868 8975 IVGLPNVGK True H1975_Epitope_Rep1 895.5491022090699 895.54800993586 39.427 2 -0.09158471021280894 0.02388392412873435 0.9438714419765777 ['ENSG00000138430|ENST00000284719|OLA1', 'nc|ENSG00000138430|Q9NTK5-3|OLA1'] 135494 10762 YEDGNVQLV True H1975_Epitope_Rep2 1035.4872897981497 1035.48618993586 46.425 2 -0.09159847342792055 0.02388392412873435 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF'] 1592 16429 AEFLKVFLP True NCI_RA007_Epitope_Rep5 1062.6113681124598 1062.61026993586 69.948 2 -0.09162996175703242 0.02388392412873435 0.9438714419765777 ['ENSG00000176171|ENST00000368636|BNIP3'] 132658 4123 VYQNHVQHL True NCI_RA007_Epitope_Rep4 1136.57269118796 1136.5715899358602 22.146 2 -0.09163530349790744 0.02388392412873435 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 5746 7777 APDGYIVK True PC9_epitope_Rep5 861.45961849833 861.45852993586 34.858 2 -0.09165775767166791 0.02388392412873435 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1', 'DDX1|p.S269L|1|0.17|ENSG00000079785|chr2:15606253-15606253|C/T|missense_variant'] 2723 3875 AETQQPPAA True H1975_Epitope_Rep1 911.4348603024698 911.43376993586 19.582 2 -0.09172635599445891 0.02388392412873435 0.9438714419765777 ['ENSG00000065978|ENST00000321358|YBX1'] 44509 17932 IPAALPVAA True PC9_epitope_Rep1 821.50108938749 821.49998993586 73.767 2 -0.09175099577423386 0.023903351643977392 0.9438714419765777 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.L269Pfs*11|1|0.15|ENSG00000145715|chr5:87332616-87332620|TTACT/-|frameshift_variant', 'RASA1|p.N407Sfs*3|1|0.22|ENSG00000145715|chr5:87349329-87349332|CAAT/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1', 'RASA1|p.L146Sfs*24|1|0.5|ENSG00000145715|chr5:87268885-87268897|CTTTGGGGGCGGG/-|frameshift_variant'] 88059 18397 QVVGGIYGV True PC9_epitope_Rep2 890.4861675993399 890.48506993586 76.095 2 -0.09177670685465754 0.023941727864350112 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 30006 16573 FYGPQVNNI True PC9_epitope_Rep6 1050.51344497634 1050.5123499358601 76.189 2 -0.09177731679906553 0.023941727864350112 0.9438714419765777 ['ENSG00000106299|ENST00000223023|WASL'] 6424 13097 APSGNFVAC True PC9_epitope_Rep5 864.37998827864 864.37943496793 55.381 1 -0.0917914989233488 0.023941727864350112 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 69974 20585 LYEQAFQLL True PC9_epitope_Rep6 1123.5913609438699 1123.59026993586 91.91 2 -0.09184676180928159 0.023978667940222475 0.9438714419765777 ['nc|ENSG00000102871|Q15628-2|TRADD', 'ENSG00000102871|ENST00000345057|TRADD'] 48547 2847 KEGKPPISV True H1975_Epitope_Rep1 953.5545815123298 953.55348993586 14.579 2 -0.0918696935757301 0.023978667940222475 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 54492 15720 LAAATATFAAA True PC9_epitope_Rep3 977.5181960036099 977.51708993586 65.625 2 -0.09188446611740271 0.023978667940222475 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 57166 7204 LEERTPPVP True H1975_Epitope_Rep2 1036.5553097883198 1036.5542099358602 32.645 2 -0.09189090956590039 0.023978667940222475 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 48771 8192 KEQLPPLAA True H1975_Epitope_Rep2 965.5545815123298 965.55348993586 36.463 2 -0.09189772290303737 0.023978667940222475 0.9438714419765777 ['ENST00000428135.7_1_7:17979950-17980106:-|nuORF'] 65035 14767 LSDKEELVGT True PC9_epitope_Rep3 1089.5553693579698 1089.55426993586 61.936 2 -0.09191686660845648 0.023978667940222475 0.9438714419765777 ['GDF6|p.A164T|1|0.6|ENSG00000156466|chr8:96145441-96145441|C/T|missense_variant'] 4002 14749 AHGVSLVL True PC9_epitope_Rep1 794.46503823194 794.46394993586 61.551 2 -0.09195179558319486 0.024017988617821468 0.9438714419765777 ['ENST00000588598.5_1_19:1881968-1882184:-|nuORF'] 125648 18948 VMLDVPIRL True PC9_epitope_Rep6 1054.62088725034 1054.6197899358601 85.529 2 -0.09201188918276115 0.024036930913721746 0.9438714419765777 ['nc|ENSG00000075391|Q9UJF2|RASAL2', 'ENSG00000075391|ENST00000367649|RASAL2'] 12338 9028 DIVMTQSPD True NCI_RA007_Epitope_Rep4 1004.44846176128 1004.44736993586 41.558 2 -0.09203133151180831 0.024036930913721746 0.9438714419765777 ['nc|ENSG00000211598|P06312|IGKV4-1'] 37485 14058 GYEPPVQESV True PC9_epitope_Rep2 1103.51350454599 1103.5124099358602 59.352 2 -0.09208111438474513 0.0240762480848439 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 132190 12726 VYKAFVDNY True PC9_epitope_Rep4 1117.54441075145 1117.5433099358602 56.806 2 -0.09212422988247483 0.024091831456650618 0.9438714419765777 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 91948 7443 RPPLNPVSA True PC9_epitope_Rep4 949.53451477409 949.53340993586 35.981 2 -0.09215971726139814 0.024091831456650618 0.9438714419765777 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'nc|ENSG00000134278|Q08AE8-4|SPIRE1', 'SPIRE1|p.G591Rfs*25|1|0.26|ENSG00000134278|chr18:12454351-12454352|-/T|frameshift_variant'] 53517 16386 KVPEIEVTV True PC9_epitope_Rep3 1012.5804619069999 1012.57936993586 68.167 2 -0.09217728253392561 0.024091831456650618 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 67273 4692 LTDNGRHITY True H1975_Epitope_Rep3 1188.58873517492 1188.5876299358601 23.171 2 -0.09218185659201714 0.024091831456650618 0.9438714419765777 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 16704 21942 EEVQSLPLPL True PC9_epitope_Rep2 1123.6124903112698 1123.6113899358602 89.876 2 -0.09222624480291731 0.024091831456650618 0.9438714419765777 ['ENSG00000145912|ENST00000274606|NHP2'] 12337 8893 DIVMTQSPD True NCI_RA007_Epitope_Rep3 1004.44846176128 1004.44736993586 42.067 2 -0.09223348795418823 0.024091831456650618 0.9438714419765777 ['nc|ENSG00000211598|P06312|IGKV4-1'] 140920 21387 YYYINYTTI True PC9_epitope_Rep5 1212.5702911461199 1212.56918993586 87.327 2 -0.09224318798886133 0.024091831456650618 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 35676 3975 GTNPGIITK True NCI_RA007_Epitope_Rep3 899.50763131991 899.50652993586 22.023 2 -0.09224545613804232 0.024091831456650618 0.9438714419765777 ['ENST00000474097.5_1_7:6620192-6623202:+|nuORF', 'ENSG00000136247|ENST00000335965|ZDHHC4'] 64093 10519 LQEDPPAGV True PC9_epitope_Rep4 924.4552613938798 924.45416993586 48.185 2 -0.09226241663393812 0.024091831456650618 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 125421 15291 VLTNKLLTV True PC9_epitope_Rep4 999.63283183303 999.63172993586 66.746 2 -0.09227079322155861 0.024107888769542906 0.9438714419765777 ['ENSG00000165195|ENST00000333590|PIGA'] 106198 21936 SVPIEIPTI True PC9_epitope_Rep1 967.5589981864299 967.55790993586 89.194 2 -0.09229161137770367 0.024107888769542906 0.9438714419765777 ['ENSG00000112996|ENST00000507110|MRPS30', 'MRPS30|p.C266Y|1|0.42|ENSG00000112996|chr5:44811964-44811964|G/A|missense_variant'] 21771 12195 ESDFDDEAYY True H1975_Epitope_Rep3 1252.4407930982 1252.43968993586 52.079 2 -0.09230120511414681 0.024107888769542906 0.9438714419765777 ['ENSG00000168078|ENST00000301905|PBK', 'nc|ENSG00000168078|Q96KB5-2|PBK'] 118507 13407 VDSQILYY True H1975_Epitope_Rep1 999.49131254943 999.49020993586 56.683 2 -0.09239201734965902 0.024107888769542906 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 129158 5703 VTDDSPKYNY True H1975_Epitope_Rep2 1200.5298828861198 1200.52878993586 26.933 2 -0.09240950784033111 0.024107888769542906 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 118172 8382 VAVSGKGF True PC9_epitope_Rep4 763.4228390667898 763.42174993586 39.699 2 -0.09243541797954508 0.024107888769542906 0.9438714419765777 ['nc|ENSG00000165409|P16473-3|TSHR'] 43671 9584 IINEPTAAA True PC9_epitope_Rep1 898.4759968384599 898.47488993586 41.721 2 -0.09244409867754685 0.024107888769542906 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'HSPA2|p.D209Rfs*26|1|0.14|ENSG00000126803|chr14:64541469-64541470|-/T|frameshift_variant', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'HSPA2|p.A183S|1|0.29|ENSG00000126803|chr14:64541396-64541396|G/T|missense_variant', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENSG00000044574|ENST00000324460|HSPA5'] 5720 6591 APASVPAQA True PC9_epitope_Rep1 810.4235673427798 810.42246993586 30.158 2 -0.09244970763670626 0.024107888769542906 0.9438714419765777 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 76530 12827 NTDNLLTEY True H1975_Epitope_Rep3 1081.49276910141 1081.49217496793 54.559 1 -0.09249977577234307 0.024126340075979077 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant', 'ENST00000505464.1_1_5:5423001-5437265:+|nuORF'] 83030 22259 PYLALLTIP True PC9_epitope_Rep4 999.60046907559 999.5998749679301 93.859 1 -0.09257284542629929 0.024126340075979077 0.9438714419765777 ['ENSG00000152942|ENST00000354868|RAD17', 'nc|ENSG00000152942|O75943|RAD17', 'nc|ENSG00000152942|O75943-4|RAD17', 'nc|ENSG00000152942|O75943-3|RAD17'] 113440 15472 TQNPNYYNL True PC9_epitope_Rep2 1125.5090878718902 1125.50798993586 64.79 2 -0.09258778798287735 0.024126340075979077 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 103749 15764 SRFGKYFEI True PC9_epitope_Rep4 1145.58694426977 1145.58529490379 68.559 3 -0.0925983418431813 0.024144789180588704 0.9438714419765777 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'MYO1F|p.A217Pfs*12|1|0.18|ENSG00000142347|chr19:8551862-8551862|C/-|frameshift_variant', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 64096 11419 LQEDPPAGV True PC9_epitope_Rep5 924.4552613938798 924.45471496793 48.922 1 -0.09262984694268113 0.024144789180588704 0.9438714419765777 ['ENSG00000077721|ENST00000371558|UBE2A', 'nc|ENSG00000077721|P49459-2|UBE2A'] 97649 6767 SHAVAQSVL True PC9_epitope_Rep4 910.4872302285 910.48612993586 33.228 2 -0.09264092672694202 0.024144789180588704 0.9438714419765777 ['ENSG00000120451|ENST00000265909|SNX19', 'nc|ENSG00000120451|Q92543-2|SNX19'] 63269 16114 LPANAILNQF True H1975_Epitope_Rep1 1099.6025943339098 1099.6014899358602 67.326 2 -0.0926962523822614 0.02415843159087746 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4', 'ENST00000525045.5_1_1:40029448-40030891:-|nuORF'] 5671 22075 APALLLIPAA True PC9_epitope_Rep2 948.60080342876 948.60025496793 90.384 1 -0.09271879441073314 0.02415843159087746 0.9438714419765777 ['nc|ENSG00000137404|Q8IXM6-6|NRM', 'ENST00000462857.5_1_6:30657820-30658751:-|nuORF', 'nc|ENSG00000137404|Q8IXM6-2|NRM', 'ENSG00000137404|ENST00000376421|NRM'] 62006 19050 LLLRNLTVQ True PC9_epitope_Rep2 1068.6655289436399 1068.6644299358602 78.64 2 -0.09273847956366246 0.02415843159087746 0.9438714419765777 ['ENSG00000126773|ENST00000406854|PCNX4'] 9109 16565 AVLGAVVTA True PC9_epitope_Rep5 799.48035394291 799.47924993586 68.722 2 -0.09275246114006551 0.02415843159087746 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'HLA-C|p.V320F|1|0.16|ENSG00000204525|chr6:31270023-31270023|C/A|missense_variant', 'ENST00000470363.5_1_6:31237527-31238194:-|nuORF'] 33693 13962 GLPSVHSESL True PC9_epitope_Rep5 1024.5189242796 1024.5178299358602 58.726 2 -0.09278278140089642 0.02415843159087746 0.9438714419765777 ['ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-2|MTX3', 'nc|ENSG00000177034|Q5HYI7-4|MTX3', 'ENST00000512560.5_1_5:79286041-79287061:-|nuORF'] 99566 22498 SLFFHFPPLL True PC9_epitope_Rep4 1216.66446631448 1216.6633699358601 94.769 2 -0.09281209778286191 0.02415843159087746 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000572932.1_1_16:16374097-16382502:+|nuORF'] 137728 20314 YNDTAGYFI True PC9_epitope_Rep6 1062.46582607758 1062.46472993586 90.845 2 -0.09283569007242153 0.02415843159087746 0.9438714419765777 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 43907 12186 ILDQKINEV True PC9_epitope_Rep3 1070.5971746003 1070.5960699358602 51.908 2 -0.09284348121608216 0.02415843159087746 0.9438714419765777 ['ENSG00000115758|ENST00000234111|ODC1', 'ENST00000446285.5_1_2:10584646-10585158:-|nuORF'] 20337 12058 EPGFSEVLP True H1975_Epitope_Rep1 973.4756624852898 973.47456993586 51.392 2 -0.09286809238549378 0.02415843159087746 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 44182 5475 ILRENDFEPK True NCI_RA007_Epitope_Rep5 1259.6510010783097 1259.64934490379 27.747 3 -0.0928735481377099 0.02415843159087746 0.9438714419765777 ['ENSG00000240563|ENST00000498273|L1TD1'] 4226 6298 AIERVTCHAVP True NCI_RA007_Epitope_Rep2 1194.61792712822 1194.61627490379 29.103 3 -0.09289031195207877 0.02415843159087746 0.9438714419765777 ['ENST00000563562.5_1_16:68349816-68371418:+|nuORF'] 47375 13784 IYIAGHPAF True PC9_epitope_Rep6 987.51780208079 987.51670993586 64.82 2 -0.09292456776540332 0.02415843159087746 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 2618 4527 AESPDARRPLP True H1975_Epitope_Rep2 1207.6309343400699 1207.62928490379 22.524 3 -0.09293914733906264 0.02415843159087746 0.9438714419765777 ['ENST00000552943.5_1_16:699416-703842:+|nuORF'] 95655 11729 SAVPPGTSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 50.114 2 -0.09305072538406078 0.02419675520916176 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 116638 17506 TYIKFINLF True NCI_RA007_Epitope_Rep4 1157.6484818971699 1157.64738993586 75.785 2 -0.09305610233753271 0.02419675520916176 0.9438714419765777 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50303271-50309027:+|nuORF'] 133208 6323 WEDDKVTEA True H1975_Epitope_Rep2 1091.4771190372699 1091.4760299358602 29.254 2 -0.09306107862030977 0.02419675520916176 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 60989 19505 LLALALAL True H1975_Epitope_Rep2 796.54222592348 796.54167496793 80.938 1 -0.09312663943336845 0.024215674579506144 0.9438714419765777 ['ENSG00000120708|ENST00000442011|TGFBI', 'ENST00000504185.5_1_5:135364744-135380547:+|nuORF'] 47481 15954 IYKFITERF True PC9_epitope_Rep4 1215.6651945904698 1215.66355490379 69.296 3 -0.09312966816539028 0.024215674579506144 0.9438714419765777 ['ENSG00000178919|ENST00000375123|FOXE1'] 27985 9660 FQTEVGKQL True PC9_epitope_Rep4 1048.5553097883198 1048.5542099358602 44.782 2 -0.09328019197108207 0.024235074255949424 0.9438714419765777 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 112733 11124 TPIVGQPSIPG True H1975_Epitope_Rep1 1064.5866099165999 1064.58607496793 47.753 1 -0.09329931063655454 0.02425158032839025 0.9438714419765777 ['CON__P12763'] 105797 12423 SVIKELRQL True PC9_epitope_Rep4 1084.6604435631998 1084.65934993586 55.589 2 -0.09334483674352233 0.02425158032839025 0.9438714419765777 ['ENSG00000122970|ENST00000242591|IFT81'] 106452 17830 SVVDGTPLV True PC9_epitope_Rep4 885.48074786573 885.4801949679301 76.617 1 -0.09335746924389365 0.02425158032839025 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 57167 7297 LEERTPPVP True H1975_Epitope_Rep2 1036.5553097883198 1036.5542099358602 33.006 2 -0.09337843167069003 0.02425158032839025 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 77121 5558 NYARGHYTI True PC9_epitope_Rep4 1093.5304920228102 1093.52938993586 28.145 2 -0.0934051449452392 0.02425158032839025 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000550254.1_1_12:49580068-49580335:-|nuORF', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENST00000462806.5_1_2:220116196-220118580:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C'] 76195 7623 NRVEVGKDQEF True PC9_epitope_Rep1 1319.6469783270297 1319.64532490379 34.143 3 -0.09344699104962917 0.02425158032839025 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 90579 4797 RKHWIANNL True NCI_RA007_Epitope_Rep3 1150.63596015086 1150.63432490379 25.835 3 -0.09344754412936013 0.02425158032839025 0.9438714419765777 ['nc|ENSG00000101294|Q8TCT9|HM13', 'nc|ENSG00000101294|Q8TCT9-4|HM13', 'ENSG00000101294|ENST00000398174|HM13', 'ENST00000464173.5_1_20:30136866-30137929:+|nuORF', 'ENST00000483310.5_1_20:30136863-30150236:+|nuORF', 'ENST00000472128.5_1_20:30136905-30155443:+|nuORF', 'ENST00000492709.5_1_20:30132820-30157019:+|nuORF', 'ENST00000460389.5_1_20:30136650-30157019:+|nuORF'] 96198 7852 SEEGNTMVP True H1975_Epitope_Rep2 962.40151156886 962.40096496793 35.153 1 -0.09348101885947599 0.02427001132998072 0.9438714419765777 ['ENSG00000135587|ENST00000258052|SMPD2'] 89138 4267 REFTDSAEA True NCI_RA007_Epitope_Rep3 1024.4461532621597 1024.4450499358602 23.482 2 -0.09351235000444291 0.02427001132998072 0.9438714419765777 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL'] 69378 13527 LVQGELVTA True PC9_epitope_Rep4 928.5229470308799 928.52184993586 59.927 2 -0.09354893822462165 0.02427001132998072 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1'] 65088 21296 LSDLNDELLLK True PC9_epitope_Rep2 1271.69728256439 1271.69618993586 87.378 2 -0.09366095612077775 0.024288440133566545 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 5722 6561 APASVPAQA True PC9_epitope_Rep5 810.4235673427798 810.42246993586 30.207 2 -0.09366944246670574 0.024288440133566545 0.9438714419765777 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 73569 13877 NFTNVAATF True NCI_RA007_Epitope_Rep5 983.4712458111899 983.47014993586 60.054 2 -0.09368175895541277 0.024288440133566545 0.9438714419765777 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant', 'ENST00000588547.1_1_17:40060903-40061877:-|nuORF', 'ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY'] 67311 4833 LTDPRGAQAHY True H1975_Epitope_Rep2 1227.5996342117899 1227.5979749037901 23.68 3 -0.09370246048840347 0.024307832965635125 0.9438714419765777 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-4|SPIRE2'] 34909 17508 GQVVHLTLV True PC9_epitope_Rep3 964.57056592964 964.56946993586 72.523 2 -0.09371602130502213 0.024325291148296832 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'PATJ|p.P937Rfs*9|2|0.25|ENSG00000132849|chr1:61864607-61864607|C/-|frameshift_variant'] 12425 9042 DKKEHLVL True PC9_epitope_Rep4 980.5654805491998 980.56438993586 42.353 2 -0.09374197517609725 0.024325291148296832 0.9438714419765777 ['ENSG00000120318|ENST00000239440|ARAP3', 'nc|ENSG00000120318|Q8WWN8-2|ARAP3'] 71980 13630 MPYSGMTGA True PC9_epitope_Rep5 913.36737498961 913.36682496793 57.45 1 -0.09374835231417909 0.024325291148296832 0.9438714419765777 ['ENSG00000111816|ENST00000606080|FRK', 'nc|ENSG00000111816|P42685-2|FRK'] 29421 24159 FVFPGELLL True PC9_epitope_Rep5 1033.5848190114498 1033.5837299358602 97.913 2 -0.09377938173687278 0.024325291148296832 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 63585 20568 LPLLPAPGAAA True PC9_epitope_Rep1 989.5909670210498 989.58986993586 83.928 2 -0.09378005413914481 0.024325291148296832 0.9438714419765777 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 113698 11356 TRDETNYGIP True PC9_epitope_Rep1 1164.5411162761598 1164.54000993586 48.56 2 -0.09384042303321354 0.024344197138314785 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 102044 6186 SPPPPPPPP True NCI_RA007_Epitope_Rep5 881.4647038787699 881.46360993586 30.474 2 -0.09384821241705434 0.024344197138314785 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 106699 13542 SYAQYVHNL True PC9_epitope_Rep4 1093.51925863277 1093.5181699358602 59.985 2 -0.0939134362686038 0.02438297364969596 0.9438714419765777 ['ENST00000544140.5_1_11:73555872-73571072:+|nuORF', 'nc|ENSG00000175581|Q96GC5-3|MRPL48', 'ENSG00000175581|ENST00000310614|MRPL48', 'ENST00000543374.1_1_11:73555872-73556061:+|nuORF'] 42259 19076 IEHSNIVTL True PC9_epitope_Rep3 1024.5553097883198 1024.5542099358602 78.599 2 -0.09391727244635928 0.02438297364969596 0.9438714419765777 ['PAN3|p.Q544E|2|0.05|ENSG00000152520|chr13:28267151-28267151|C/G|missense_variant'] 65355 9900 LSENSTCPI True PC9_epitope_Rep2 962.43789707758 962.43678993586 43.412 2 -0.09397882114444366 0.024400906092278345 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 96061 4678 SEAQPPESP True H1975_Epitope_Rep3 940.4137905047199 940.41268993586 23.118 2 -0.0939891620321 0.024400906092278345 0.9438714419765777 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 99639 7744 SLFSSKLST True NCI_RA007_Epitope_Rep4 968.5178616504401 968.51676993586 36.464 2 -0.09399037181496561 0.024400906092278345 0.9438714419765777 ['nc|ENSG00000058804|Q9BTX1-4|NDC1', 'nc|ENSG00000058804|Q9BTX1-5|NDC1', 'nc|ENSG00000058804|Q9BTX1-2|NDC1', 'ENSG00000058804|ENST00000371429|NDC1', 'nc|ENSG00000058804|Q9BTX1-6|NDC1'] 1281 4507 AEDRSLQAEP True H1975_Epitope_Rep2 1114.5254662120199 1114.52436993586 22.448 2 -0.09400500071497768 0.024400906092278345 0.9438714419765777 ['ENSG00000111816|ENST00000606080|FRK', 'FRK|p.G374Dfs*8|1|0.22|ENSG00000111816|chr6:115944263-115944263|C/-|frameshift_variant'] 2924 8465 AFFAGSQR True PC9_epitope_Rep3 882.4348007328199 882.43370993586 37.523 2 -0.09408721403243434 0.02441835051956051 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'chr11:62629292-62629588|143|13.34|0.66|4.34|-|2|None,GANAB|1'] 8499 15039 ATVLQAVSA True PC9_epitope_Rep2 858.4810822188999 858.47998993586 63.103 2 -0.09410393415874274 0.02441835051956051 0.9438714419765777 ['ENSG00000183291|ENST00000331835|SELENOF', 'ENST00000331835.9_2_1:87346375-87379803:-|nuORF', 'nc|ENSG00000183291|O60613-2|SELENOF'] 71903 10779 MPQSGTGVSV True PC9_epitope_Rep2 961.45388149489 961.45333496793 46.779 1 -0.0941119011816355 0.02441835051956051 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 76237 10091 NSATGVPTV True PC9_epitope_Rep4 844.42904664604 844.4284949679301 46.487 1 -0.09411531867760517 0.02441835051956051 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 9128 17160 AVLQVTETV True PC9_epitope_Rep2 958.53351171458 958.53240993586 71.263 2 -0.09413775013742914 0.02441835051956051 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 95575 5007 SASGPLHSV True PC9_epitope_Rep4 853.4293809992101 853.42828993586 25.881 2 -0.09420783095545025 0.02443627694447204 0.9438714419765777 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 11925 17409 DHSIIETL True PC9_epitope_Rep1 926.47091145802 926.46980993586 71.763 2 -0.09425365870482422 0.02443627694447204 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000436135.1_1_1:158495283-158495625:+|nuORF'] 84517 6797 QGVLNDRLAT True H1975_Epitope_Rep3 1085.58292151849 1085.58182993586 31.098 2 -0.09430456784350029 0.02443627694447204 0.9438714419765777 ['ENST00000247295.4_1_9:134133967-134134456:-|nuORF'] 101616 20703 SPFFPLVSA True PC9_epitope_Rep6 963.5065686907499 963.50546993586 92.396 2 -0.09431043383521905 0.02443627694447204 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 14196 18056 DSTLIMQLLR True NCI_RA007_Epitope_Rep1 1188.6536439305999 1188.6525499358602 74.372 2 -0.09435574559671725 0.0244953909726637 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 65015 20584 LSDILQALI True PC9_epitope_Rep2 984.5855472874399 984.58444993586 84.609 2 -0.09438391060108517 0.024511361830605434 0.9438714419765777 ['ENSG00000106617|ENST00000287878|PRKAG2', 'nc|ENSG00000106617|Q9UGJ0-2|PRKAG2', 'nc|ENSG00000106617|Q9UGJ0-3|PRKAG2'] 103585 15910 SRDGMNIVL True PC9_epitope_Rep5 1003.5120650773499 1003.5114749679301 66.19 1 -0.09439048341234087 0.024511361830605434 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF'] 28828 11882 FTDIDGQVY True H1975_Epitope_Rep1 1056.4763907612798 1056.47528993586 50.704 2 -0.0943981939075187 0.024511361830605434 0.9438714419765777 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11', 'ENST00000478567.5_1_10:122645388-122659588:+|nuORF', 'ENST00000604509.5_1_10:122640390-122648742:+|nuORF'] 27596 10415 FPSAAATAA True PC9_epitope_Rep5 805.39701824177 805.39592993586 45.046 2 -0.09445302785608048 0.024511361830605434 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 30252 11991 GAAGPANVNLI True PC9_epitope_Rep5 995.53999407735 995.53888993586 51.119 2 -0.094489281334619 0.024511361830605434 0.9438714419765777 ['ENST00000542506.5_1_11:61582544-61582673:-|nuORF'] 140719 16381 YYQGGKFQF True PC9_epitope_Rep3 1136.52909504048 1136.5279899358602 68.149 2 -0.09448963437315887 0.024511361830605434 0.9438714419765777 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 63172 8999 LNSVVQSV True PC9_epitope_Rep2 844.4654321547599 844.46432993586 39.966 2 -0.0944968544860462 0.024511361830605434 0.9438714419765777 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 37400 10763 GVYNGKTFNQV True PC9_epitope_Rep2 1225.60913626633 1225.60802993586 46.718 2 -0.0945017611840672 0.024511361830605434 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 135488 6121 YEDGGKPPVP True H1975_Epitope_Rep2 1057.50802524273 1057.5069299358602 28.523 2 -0.09452326445435295 0.02453073790843182 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 72808 15584 NAIGSASVVTV True PC9_epitope_Rep4 1016.55022440788 1016.54912993586 67.865 2 -0.09456319888512059 0.024549625598347467 0.9438714419765777 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF'] 95405 20815 SAISMGIVSV True PC9_epitope_Rep2 962.5106680950199 962.50956993586 85.507 2 -0.09457814403572008 0.024549625598347467 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 9807 11631 AYLHTTTTF True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 52.496 2 -0.09465940345054154 0.024563145353455124 0.9438714419765777 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF', 'nc|ENSG00000108846|O15438-5|ABCC3'] 9393 6002 AVVGPSHEV True PC9_epitope_Rep5 893.46068112749 893.45958993586 28.082 2 -0.09466540499137327 0.024563145353455124 0.9438714419765777 ['ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 139862 20786 YVDPVITSI True PC9_epitope_Rep1 1005.53826274185 1005.53767496793 84.783 1 -0.09467493574440453 0.024563145353455124 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 23800 10421 EYLDRAEKL True PC9_epitope_Rep5 1135.5873381925899 1135.58569490379 45.069 3 -0.09468809196707045 0.024563145353455124 0.9438714419765777 ['ENST00000591475.5_1_18:61064221-61089576:-|nuORF', 'ENSG00000119541|ENST00000238497|VPS4B'] 31808 12307 GEMEPPALP True H1975_Epitope_Rep3 939.4371688015898 939.43606993586 52.519 2 -0.09470919903132348 0.024563145353455124 0.9438714419765777 ['ENSG00000100726|ENST00000262319|TELO2'] 100592 8240 SLQFVHQECLK True NCI_RA007_Epitope_Rep2 1330.6703566239 1330.66924993586 36.689 2 -0.09471456484106865 0.024563145353455124 0.9438714419765777 ['ENSG00000173838|ENST00000311269|MARCHF10', 'BCAS3-MARCH10|1|fusion'] 61884 21554 LLLGTLLQ True PC9_epitope_Rep5 869.55860426361 869.55750993586 87.945 2 -0.09476913828478395 0.024563145353455124 0.9438714419765777 ['ENSG00000171794|ENST00000304477|UTF1'] 94935 12458 RYPDSHQLF True PC9_epitope_Rep3 1161.55670677065 1161.5550749037902 52.944 3 -0.09483779781563306 0.024563145353455124 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 76940 16872 NVPDSFNEV True PC9_epitope_Rep3 1019.45598966987 1019.45488993586 70.055 2 -0.09485050306033652 0.024563145353455124 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 88275 20605 QYGEVANLL True PC9_epitope_Rep3 1005.5131106231698 1005.51200993586 84.525 2 -0.09485860325355913 0.024563145353455124 0.9438714419765777 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-3|VPS53', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 115688 22172 TVLEALQQL True PC9_epitope_Rep1 1013.57571087973 1013.5746099358599 90.102 2 -0.09486288521012647 0.024563145353455124 0.9438714419765777 ['BAP1|p.V386Efs*45|1|0.21|ENSG00000163930|chr3:52404546-52404547|-/CT|frameshift_variant', 'ENSG00000163930|ENST00000460680|BAP1'] 31344 13704 GEALDALRPW True NCI_RA007_Epitope_Rep1 1126.5771078620598 1126.5760099358602 57.319 2 -0.09486461047292827 0.024563145353455124 0.9438714419765777 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 82376 16269 PTVMGILL True H1975_Epitope_Rep1 842.4935614789 842.4930149679301 67.929 1 -0.09490299523947938 0.024563145353455124 0.9438714419765777 ['OR51B2|p.W84L|1|0.22|ENSG00000279012|chr11:5324047-5324047|C/A|missense_variant'] 216 21094 AAFPGASLYL True PC9_epitope_Rep4 1008.5280324113198 1008.5274749679301 89.3 1 -0.09492898307142393 0.024582026130812916 0.9438714419765777 ['nc|ENSG00000183283|Q15038-2|DAZAP2', 'ENSG00000183283|ENST00000412716|DAZAP2', 'nc|ENSG00000183283|Q15038-5|DAZAP2'] 126793 7407 VPSPVSNSA True PC9_epitope_Rep3 856.4290466460401 856.4279499358599 33.498 2 -0.09494593012792801 0.024582026130812916 0.9438714419765777 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000469665.1_1_3:49160507-49161165:-|nuORF'] 48974 19252 KFAEEFYSF True PC9_epitope_Rep4 1166.5284263341398 1166.5278749679298 82.155 1 -0.09495282321962928 0.02460090540862521 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L'] 20340 12359 EPGFSEVLP True H1975_Epitope_Rep2 973.4756624852898 973.47511496793 52.624 1 -0.09495339248511549 0.02460090540862521 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 72479 14341 MVADKFTEL True PC9_epitope_Rep6 1052.52123277872 1052.52012993586 67.06 2 -0.0950223273452374 0.02463914864891695 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 4282 14177 AIITGFRNV True PC9_epitope_Rep4 989.56581490237 989.56470993586 62.435 2 -0.0950455278754509 0.02463914864891695 0.9438714419765777 ['nc|ENSG00000156970|O60566-3|BUB1B', 'nc|ENSG00000156970|O60566-2|BUB1B', 'MARK2-BUB1B|1|fusion', 'ENSG00000156970|ENST00000287598|BUB1B'] 39197 6892 HLGALLAR True PC9_epitope_Rep6 849.51847078713 849.51736993586 35.421 2 -0.09505836505199984 0.02463914864891695 0.9438714419765777 ['ENSG00000187094|ENST00000396169|CCK', 'ENST00000484359.1_1_3:42304789-42306234:-|nuORF'] 27960 17708 FQSGDFHVI True PC9_epitope_Rep5 1048.4977949122 1048.49668993586 73.131 2 -0.09509513067138921 0.02465557628935562 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L', 'CSE1L|p.R137H|1|0.67|ENSG00000124207|chr20:49066444-49066444|G/A|missense_variant'] 36850 12670 GVPTKVFNV True PC9_epitope_Rep6 959.5440168286299 959.54290993586 60.203 2 -0.09510009548334927 0.02465557628935562 0.9438714419765777 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3'] 79555 8450 PGSRTSLLLA True NCI_RA007_Epitope_Rep3 1013.5869442697699 1013.58584993586 40.319 2 -0.09511220313232034 0.02465557628935562 0.9438714419765777 ['ENSG00000136488|ENST00000316193|CSH1'] 106992 15825 SYLERHGLINF True PC9_epitope_Rep6 1347.6935345966297 1347.69187490379 73.135 3 -0.09515038787282372 0.02465557628935562 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 57583 9054 LELGAHAPPP True PC9_epitope_Rep6 1000.5341804209199 1000.53308993586 44.883 2 -0.09515678253101345 0.02465557628935562 0.9438714419765777 ['ENSG00000119919|ENST00000344586|NKX2-3'] 108156 18200 TDRQLFDTI True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 75.216 2 -0.09517598354601146 0.02465557628935562 0.9438714419765777 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 2824 16854 AEVISLFSA True H1975_Epitope_Rep2 935.49639792987 935.49530993586 70.075 2 -0.09519835774952182 0.02465557628935562 0.9438714419765777 ['nc|ENSG00000134339|P0DJI9-2|SAA2'] 88004 14335 QVSHEFAL True PC9_epitope_Rep2 929.4606811274898 929.45958993586 60.404 2 -0.09530085826719936 0.024694789081885857 0.9438714419765777 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34214165-34218616:-|nuORF'] 28589 18785 FSPDGQYLVTG True PC9_epitope_Rep5 1182.55570371114 1182.55460993586 77.269 2 -0.09531241788453498 0.024713659011056634 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1'] 131611 14786 VVYGGGAAEI True PC9_epitope_Rep5 934.4759968384599 934.47544496793 61.875 1 -0.09539722393892588 0.024713659011056634 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 77481 21124 NYPPQYLILKL True PC9_epitope_Rep2 1360.77547331544 1360.77436993586 86.712 2 -0.09544842986666642 0.024751885668916236 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 71772 7510 [Acetylation]-M[Oxidation]NGPEDLPK True H1975_Epitope_Rep1 1057.4750115590298 1057.4744749679298 33.886 1 -0.09545764865284856 0.024751885668916236 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'TXNRD1-LAMTOR3|1|fusion', 'TXNRD1|p.V276Mfs*88|1|0.48|ENSG00000198431|chr12:104319008-104319011|GTCT/-|frameshift_variant', 'TXNRD1-LAMTOR3|3|fusion', 'TXNRD1|p.C214Lfs*4|1|0.52|ENSG00000198431|chr12:104315801-104315802|-/G|frameshift_variant', 'TXNRD1-LAMTOR3|2|fusion'] 19849 14144 ELVIHRLEAD True PC9_epitope_Rep4 1193.6404363946099 1193.6393299358601 62.309 2 -0.09548155719681917 0.024751885668916236 0.9438714419765777 ['nc|ENSG00000141577|Q9UPN4-3|CEP131', 'ENSG00000141577|ENST00000450824|CEP131', 'nc|ENSG00000141577|Q9UPN4|CEP131'] 126479 20033 VPMEIHFMEA True PC9_epitope_Rep3 1202.54640198074 1202.5453099358601 82.306 2 -0.09556039547134666 0.024770751458854354 0.9438714419765777 ['ENST00000472678.1_1_2:61258678-61258789:+|nuORF'] 140306 15769 YYDPKHVIF True PC9_epitope_Rep3 1180.59169529704 1180.5900449037902 65.814 3 -0.09556931933587261 0.024770751458854354 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 46668 9725 ITVNDLPVGR True H1975_Epitope_Rep3 1082.6084079903399 1082.60730993586 42.427 2 -0.09563285636483528 0.024788139797963762 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 80661 12027 PLPPPPPPP True PC9_epitope_Rep5 907.51673945163 907.51564993586 51.256 2 -0.09577186619349348 0.024788139797963762 0.9438714419765777 ['ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A', 'ENSG00000204334|ENST00000697325|ERICH2', 'ENSG00000146083|ENST00000274811|RNF44', 'nc|ENSG00000146083|Q7L0R7-2|RNF44', 'ENST00000508478.1_1_5:175957081-175957609:-|nuORF', 'ENST00000508096.1_1_10:126605730-126631034:+|nuORF', 'SVA_D_dup132|chr1:226114299-226115980:-|1.3983671137746794|0.0922211982552955|3.92|465.0|32|3|sense', 'ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000361272.8_2_8:17102747-17104366:-|nuORF', 'nc|ENSG00000175785|Q86XR5-2|PRIMA1', 'ENSG00000175785|ENST00000393140|PRIMA1', 'ENSG00000176182|ENST00000322217|MYPOP', 'ENSG00000113448|ENST00000340635|PDE4D', 'VCPIP1|p.I846Nfs*9|1|0.26|ENSG00000175073|chr8:66664422-66664423|-/T|frameshift_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'SEPT11-SHROOM3|2|fusion', 'ENSG00000138771|ENST00000296043|SHROOM3', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000110076|P58401|NRXN2', 'ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1', 'ENSG00000100312|ENST00000216139|ACR', 'nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.V1728Lfs*60|1|0.13|ENSG00000009694|chrX:124405213-124405219|AAGTGAC/-|frameshift_variant', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1', 'nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B', 'ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'TRERF1|p.E818Afs*14|1|0.26|ENSG00000124496|chr6:42256986-42256987|-/TG|frameshift_variant', 'ENSG00000175073|ENST00000310421|VCPIP1', 'ENST00000596700.5_1_19:50084718-50093643:+|nuORF', 'ENST00000597121.5_1_19:50086773-50093643:+|nuORF', 'ENSG00000126460|ENST00000246794|PRRG2', 'RBM15B|p.S844Pfs*27|1|0.57|ENSG00000259956|chr3:51393922-51393922|G/-|frameshift_variant', 'ENSG00000259956|ENST00000563281|RBM15B'] 132401 16853 VYNENLVHMI True PC9_epitope_Rep6 1230.60669373818 1230.60558993586 77.341 2 -0.0957725181650561 0.024788139797963762 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 57848 7384 LEQDHFQVA True H1975_Epitope_Rep1 1085.5141732523298 1085.5130699358601 33.407 2 -0.0958698719284336 0.024788139797963762 0.9438714419765777 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 87946 13090 QVQELFHEA True PC9_epitope_Rep1 1099.52982331647 1099.5287299358602 55.219 2 -0.09595839696371593 0.024788139797963762 0.9438714419765777 ['ENST00000481760.2_1_3:124925611-124930193:-|nuORF', 'ENSG00000221955|ENST00000469902|SLC12A8'] 54592 5412 LADDRRYFCR True NCI_RA007_Epitope_Rep5 1313.6298887942498 1313.62825490379 27.505 3 -0.09597059446542745 0.024805032444982437 0.9438714419765777 ['ENSG00000197046|ENST00000389474|SIGLEC15'] 78383 6735 PAVFPAAR True NCI_RA007_Epitope_Rep4 827.4653725851099 827.46426993586 32.528 2 -0.09597213132660883 0.024805032444982437 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 7581 16626 ASGSEVVLL True PC9_epitope_Rep3 873.4807478657299 873.47964993586 69.088 2 -0.09599784207136158 0.024805032444982437 0.9438714419765777 ['nc|ENSG00000256590|A0JD37|TRDV3'] 94843 9592 RYMNHMQSL True PC9_epitope_Rep5 1178.5324832521 1178.53138993586 41.856 2 -0.09600329872162018 0.024805032444982437 0.9438714419765777 ['ENSG00000166233|ENST00000379887|ARIH1'] 30406 8183 GAFGKPSSL True PC9_epitope_Rep4 862.45486747106 862.45376993586 38.936 2 -0.09606021177104222 0.024805032444982437 0.9438714419765777 ['ENSG00000099812|ENST00000215582|MISP'] 4469 4820 AKFSRPAQL True NCI_RA007_Epitope_Rep3 1016.5767139392399 1016.57560993586 25.929 2 -0.09607646808226378 0.024805032444982437 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 95491 7320 SANSHNIAL True PC9_epitope_Rep5 925.46174375665 925.46064993586 33.117 2 -0.09611973522330543 0.024844227487399295 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 127750 25132 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 109.46 2 -0.09619179225573928 0.024883420974303006 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 52355 11501 KPFKEFVEA True PC9_epitope_Rep3 1093.5807962601698 1093.5796899358602 49.24 2 -0.09623933131486476 0.02489931154891574 0.9438714419765777 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 136386 15253 YHDRLSQIL True PC9_epitope_Rep5 1143.6036569630699 1143.6020249037902 63.68 3 -0.0962661461756726 0.02489931154891574 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4'] 22086 6073 ESTHPPLPP True H1975_Epitope_Rep3 973.4868958753299 973.48578993586 28.372 2 -0.09631133603431578 0.02489931154891574 0.9438714419765777 ['CCNK|p.T360S|1|0.35|ENSG00000090061|chr14:99507108-99507108|A/T|missense_variant'] 112856 6183 TPNGNSLSA True PC9_epitope_Rep1 859.40356017419 859.40246993586 28.598 2 -0.09632846224666851 0.02489931154891574 0.9438714419765777 ['PHGDH-HMGCS2|1|fusion', 'ENSG00000092621|ENST00000641023|PHGDH'] 81747 13754 PSCSAAVAM True PC9_epitope_Rep3 835.35681030591 835.35570993586 57.986 2 -0.09634087791951948 0.02489931154891574 0.9438714419765777 ['ENST00000427525.2_1_15:85175210-85177593:+|nuORF'] 34435 16957 GPYKIILTA True PC9_epitope_Rep5 974.5800679841799 974.57896993586 70.244 2 -0.09638044590760066 0.02489931154891574 0.9438714419765777 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB', 'ENST00000526210.1_1_11:62402291-62407104:-|nuORF', 'ENST00000524437.5_1_11:62402291-62406896:-|nuORF', 'ENST00000526392.1_1_11:62402291-62414071:-|nuORF'] 112695 19155 TPGLFYII True H1975_Epitope_Rep3 922.5164050984599 922.5158549679301 80.323 1 -0.09638259938383685 0.02489931154891574 0.9438714419765777 ['ENST00000369651.7_1_6:86204486-86204609:+|nuORF'] 47531 19408 IYLPYLQNW True NCI_RA007_Epitope_Rep3 1208.6229954253201 1208.62188993586 84.696 2 -0.09638907825346985 0.02489931154891574 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 130948 19566 VVINYTEQL True PC9_epitope_Rep5 1077.57062549929 1077.57007496793 80.31 1 -0.0965447663556823 0.02493800218232318 0.9438714419765777 ['ENSG00000095015|ENST00000399503|MAP3K1'] 7912 7010 ATAVVDGAFK True NCI_RA007_Epitope_Rep4 977.5181960036098 977.51708993586 33.591 2 -0.09656542069964591 0.02493800218232318 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000477555.1_1_19:12910938-12912565:-|nuORF', 'nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 89028 4516 REEEKMIPP True H1975_Epitope_Rep2 1127.5644945730298 1127.56285490379 22.484 3 -0.09663564677965181 0.024957346347657026 0.9438714419765777 ['nc|ENSG00000064607|Q8IX01-4|SUGP2', 'nc|ENSG00000064607|Q8IX01-3|SUGP2', 'ENSG00000064607|ENST00000452918|SUGP2', 'ENST00000598240.1_1_19:19105804-19136912:-|nuORF'] 125030 23312 VLPDMFFSF True PC9_epitope_Rep4 1101.5205045027299 1101.51940993586 97.924 2 -0.09668212493198831 0.02497569878394731 0.9438714419765777 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 63173 8546 LNSVVQSV True PC9_epitope_Rep4 844.4654321547599 844.46432993586 40.351 2 -0.09676981249801546 0.02497569878394731 0.9438714419765777 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 55807 24628 LDELITDLV True PC9_epitope_Rep1 1029.55939210925 1029.55828993586 99.605 2 -0.0967869518700699 0.02497569878394731 0.9438714419765777 ['ENSG00000232434|ENST00000436881|AJM1'] 72763 7527 NADPQAVTM True NCI_RA007_Epitope_Rep5 945.42258136661 945.42148993586 35.638 2 -0.09680833928016566 0.024991074616208496 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 123136 7679 VHDPAGALQAA True PC9_epitope_Rep6 1048.5301576696397 1048.5290699358602 38.863 2 -0.09680902338727315 0.024991074616208496 0.9438714419765777 ['nc|ENSG00000231925|O15533-2|TAPBP', 'ENSG00000231925|ENST00000434618|TAPBP', 'nc|ENSG00000231925|O15533-3|TAPBP', 'ENST00000476333.1_1_6:33280961-33281729:-|nuORF', 'ENST00000480730.5_1_6:33272736-33281818:-|nuORF'] 130588 5626 VVAAHLAGA True PC9_epitope_Rep4 807.46028720467 807.45918993586 28.438 2 -0.09687809365379385 0.024991074616208496 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 20338 12155 EPGFSEVLP True H1975_Epitope_Rep1 973.4756624852898 973.47456993586 51.772 2 -0.09692217956649159 0.024991074616208496 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 73514 9295 NFGFGDSRG True PC9_epitope_Rep4 955.4147935642299 955.41368993586 43.36 2 -0.0969357666787431 0.024991074616208496 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 125027 24278 VLPDMFFSF True PC9_epitope_Rep1 1101.5205045027299 1101.51940993586 98.21 2 -0.0969667509039058 0.024991074616208496 0.9438714419765777 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 520 4853 AAPPAAAAAD True PC9_epitope_Rep4 824.4028318981999 824.40172993586 25.256 2 -0.09696873155744663 0.024991074616208496 0.9438714419765777 ['NOS1AP|p.E284Dfs*40|1|0.12|ENSG00000198929|chr1:162357046-162357047|AG/-|frameshift_variant'] 44771 6500 IPTDNQIKA True PC9_epitope_Rep4 998.53965972418 998.53856993586 32.123 2 -0.09700706236528883 0.024991074616208496 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1'] 130168 6214 VTRRYSYSI True NCI_RA007_Epitope_Rep3 1143.60365696307 1143.6020249037902 31.45 3 -0.09702264462659535 0.024991074616208496 0.9438714419765777 ['LAMA3|p.Y287S|1|0.19|ENSG00000053747|chr18:23753725-23753725|A/C|missense_variant'] 108994 8764 TEVLKTHGLLV True NCI_RA007_Epitope_Rep3 1208.71287305888 1208.71123490379 41.561 3 -0.0970822252938492 0.025009916699722332 0.9438714419765777 ['ENSG00000142541|ENST00000391857|RPL13A'] 81219 18174 PPLPPLPPP True PC9_epitope_Rep3 923.54803957991 923.54694993586 75.11 2 -0.09708377523664308 0.025009916699722332 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 20966 8406 ERAAQLAI True PC9_epitope_Rep5 870.4923156089399 870.4917649679301 37.274 1 -0.09713367081053415 0.025025779328944238 0.9438714419765777 ['ENSG00000144713|ENST00000429711|RPL32', 'ENST00000475274.1_1_17:58322664-58322841:-|nuORF', 'ENST00000342691.5_1_X:40767440-40767641:+|nuORF'] 4639 10653 ALASHLIEA True PC9_epitope_Rep6 923.5076313199099 923.50652993586 51.795 2 -0.09716050636228955 0.025025779328944238 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 118644 9015 VEAPPVVTA True H1975_Epitope_Rep1 881.4858332461699 881.48528496793 39.581 1 -0.09716889148850515 0.025025779328944238 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 101747 6861 SPHLGPAPA True PC9_epitope_Rep1 845.4395517600899 845.43844993586 31.195 2 -0.09719434100195794 0.025025779328944238 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant', 'IGF2R-SYTL3|1|fusion', 'IGF2R-SYTL3|2|fusion'] 7841 10825 ATAGVVTSV True PC9_epitope_Rep1 803.43888305375 803.43778993586 46.524 2 -0.0971949489014998 0.025025779328944238 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 34883 7693 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 34.588 2 -0.09719850045222174 0.025025779328944238 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 21267 8109 ERIMKAQAL True PC9_epitope_Rep3 1058.5906497512199 1058.58954993586 36.167 2 -0.09728230817321697 0.025025779328944238 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 123084 12781 VHAPPMQL True PC9_epitope_Rep3 891.46365833295 891.46256993586 54.184 2 -0.0973758395767855 0.025025779328944238 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 93529 10754 RSNSSFVQI True PC9_epitope_Rep4 1036.53015766964 1036.5290699358602 49.122 2 -0.09756908656882572 0.0250436230964467 0.9438714419765777 ['Tigger1_dup324|chr1:83019440-83021751:-|3.250534866687885|0.2214501882032552|3.88|499.0|114|2|anti-sense'] 21495 19052 ERQRWLVAL True PC9_epitope_Rep3 1169.6669259259697 1169.66527490379 78.506 3 -0.09758181425721342 0.0250436230964467 0.9438714419765777 ['ENST00000598554.1_1_19:42027644-42028339:-|nuORF', 'ENSG00000116095|ENST00000234453|PLEKHA3', 'ENST00000498106.1_1_7:30085848-30088836:+|nuORF', 'nc|ENSG00000106086|Q96JA3-3|PLEKHA8', 'nc|ENSG00000106086|Q96JA3-2|PLEKHA8', 'ENSG00000106086|ENST00000449726|PLEKHA8'] 72544 21443 MVGEGFIEV True PC9_epitope_Rep1 979.4684689298699 979.46736993586 87.319 2 -0.09759280533609578 0.0250436230964467 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 83790 16250 QEELDTLFTTA True H1975_Epitope_Rep1 1266.5979624459399 1266.59686993586 67.855 2 -0.09759387251847064 0.0250436230964467 0.9438714419765777 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A', 'nc|ENSG00000087995|Q96IZ6-2|METTL2A'] 97602 15391 SHADVVNLL True PC9_epitope_Rep4 966.51344497634 966.51289496793 67.134 1 -0.09764027357420237 0.02506295481133385 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 981 8125 AEAAVVAVA True H1975_Epitope_Rep3 799.4439684341899 799.44341496793 36.229 1 -0.09767255516775514 0.025076319232446576 0.9438714419765777 ['ENSG00000211450|ENST00000534355|SELENOH'] 2757 6051 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 28.347 2 -0.09770164344345976 0.025076319232446576 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 35931 19209 GVAPGFQVV True PC9_epitope_Rep2 872.4756029156399 872.4750549679301 79.26 1 -0.09772500395708753 0.025076319232446576 0.9438714419765777 ['ENSG00000165724|ENST00000298585|ZMYND19'] 32846 6872 GIHETTFNS True PC9_epitope_Rep1 1004.4563240230401 1004.45522993586 31.237 2 -0.0977373450074527 0.025076319232446576 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000437653.1_1_3:175695464-175695797:-|nuORF', 'ENST00000418351.1_1_15:44281261-44281585:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENST00000493945.5_1_7:5567381-5567853:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 2125 10908 AELRAWIA True H1975_Epitope_Rep3 928.5130510535199 928.51194993586 47.045 2 -0.09777403130113793 0.025076319232446576 0.9438714419765777 ['ENSG00000142552|ENST00000270645|RCN3'] 106650 19541 SYADQMFLL True NCI_RA007_Epitope_Rep1 1086.50558271458 1086.5044899358602 80.176 2 -0.09777450410068317 0.025076319232446576 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 43548 5706 IIEAEESR True H1975_Epitope_Rep3 945.47672511445 945.47562993586 26.978 2 -0.09778567073107797 0.025076319232446576 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000465508.5_1_1:6695737-6697639:-|nuORF', 'MED15-DNAJC11|1|fusion'] 96680 7147 SEPDGPGIAA True H1975_Epitope_Rep2 912.4188758851599 912.41776993586 32.426 2 -0.09779710135787904 0.025076319232446576 0.9438714419765777 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 130237 15616 VTSPEFTSV True PC9_epitope_Rep2 965.47057710485 965.46948993586 65.344 2 -0.09781287702296342 0.025076319232446576 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'ENST00000523028.5_1_16:21912870-21927266:-|nuORF'] 12319 8352 DITSDTSGDFR True NCI_RA007_Epitope_Rep2 1212.5258601348398 1212.52527496793 37.129 1 -0.09781943927893433 0.025076319232446576 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000495713.5_1_9:75775181-75782501:+|nuORF', 'ENST00000489109.1_1_9:75775238-75780181:+|nuORF'] 10598 18659 CRSLSVPVDL True PC9_epitope_Rep4 1087.5695799534699 1087.56848993586 79.85 2 -0.09798365355654629 0.025076319232446576 0.9438714419765777 ['ENSG00000120709|ENST00000239906|FAM53C'] 228 19864 AAFVHFYGV True PC9_epitope_Rep5 1009.5021520166498 1009.50104993586 81.457 2 -0.09799270165584968 0.025076319232446576 0.9438714419765777 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 18920 6851 ELERQREEERR True H1975_Epitope_Rep1 1528.7706157003597 1528.7689649037902 31.396 3 -0.09799298055019978 0.025076319232446576 0.9438714419765777 ['ITSN2|p.G507Afs*55|1|0.21|ENSG00000198399|chr2:24295779-24295779|C/-|frameshift_variant', 'nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528'] 19003 16093 ELGFHEGDVI True PC9_epitope_Rep3 1114.5294889632999 1114.52838993586 67.051 2 -0.0980912853276929 0.02511248092283908 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 75927 11149 NRDYPPPPL True PC9_epitope_Rep4 1067.5399940773498 1067.5388899358602 50.664 2 -0.09809576855686396 0.02511248092283908 0.9438714419765777 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 34845 8793 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42883496793 39.176 1 -0.09809714721009181 0.02511248092283908 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 107229 6282 SYPRRFSTL True NCI_RA007_Epitope_Rep3 1125.59309227937 1125.59198993586 31.715 2 -0.09810977978724654 0.02511248092283908 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 117133 16992 TYSPALNKMF True PC9_epitope_Rep4 1170.5743309807401 1170.5732299358601 73.351 2 -0.09811573917431446 0.02511248092283908 0.9438714419765777 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'nc|ENSG00000141510|P04637-4|TP53', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'nc|ENSG00000141510|P04637-6|TP53', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'nc|ENSG00000141510|P04637-5|TP53', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.C135Y|1|0.88|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant', 'TP53|p.C135W|1|0.39|ENSG00000141510|chr17:7675207-7675207|G/C|missense_variant'] 62265 13004 LLQGISDVP True PC9_epitope_Rep1 940.52294703088 940.52184993586 54.891 2 -0.09812388715730082 0.02511248092283908 0.9438714419765777 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 72026 18162 MQMSPALTC True PC9_epitope_Rep1 980.4129452830399 980.41239496793 74.651 1 -0.0981385756878703 0.02511248092283908 0.9438714419765777 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 3802 7676 AGVLREEIQ True NCI_RA007_Epitope_Rep4 1013.5505587610498 1013.54946993586 36.187 2 -0.09815285286515364 0.02513180322670155 0.9438714419765777 ['ENSG00000145087|ENST00000471454|STXBP5L', 'nc|ENSG00000145087|Q9Y2K9|STXBP5L', 'nc|ENSG00000145087|Q9Y2K9-2|STXBP5L', 'STXBP5L|p.P692Tfs*22|1|0.3|ENSG00000145087|chr3:121279917-121279918|-/A|frameshift_variant'] 79274 7367 PGHLQEGFG True PC9_epitope_Rep2 940.4402800360799 940.43918993586 33.718 2 -0.09824564966560478 0.025167452736712774 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 94434 16507 RYFKGPELL True PC9_epitope_Rep5 1121.6233297784897 1121.62222993586 68.492 2 -0.09824789379261063 0.025167452736712774 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1', 'CSNK2A1|p.D205H|1|0.1|ENSG00000101266|chr20:492262-492262|C/G|missense_variant', 'ENSG00000070770|ENST00000262506|CSNK2A2'] 82502 9508 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43308993586 41.542 2 -0.09825853881020338 0.025167452736712774 0.9438714419765777 ['ENSG00000168143|ENST00000306858|FAM83B', 'FAM83B|p.M1000Ifs*12|1|0.2|ENSG00000168143|chr6:54941969-54941970|-/T|frameshift_variant', 'FAM83B|p.K141Rfs*2|1|0.3|ENSG00000168143|chr6:54870665-54870665|G/-|frameshift_variant'] 22751 8924 EVANSVGLTG True PC9_epitope_Rep1 945.4767251144499 945.47562993586 39.167 2 -0.09826683569866967 0.025167452736712774 0.9438714419765777 ['ENSG00000273079|ENST00000609686|GRIN2B'] 79250 10629 PGGLGSSSLY True H1975_Epitope_Rep1 936.4552613938799 936.45471496793 45.841 1 -0.09826916765870577 0.025167452736712774 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 71632 15877 MLPHSSFSL True PC9_epitope_Rep1 1017.4953523840501 1017.49424993586 65.88 2 -0.09828243632691626 0.025167452736712774 0.9438714419765777 ['ENST00000235382.6_1_1:192781079-192781220:+|nuORF'] 140367 13250 YYEKLHTYF True PC9_epitope_Rep4 1262.5971746003 1262.5960699358602 58.864 2 -0.09828293242767847 0.025167452736712774 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 22224 9962 ETDKNGFLQY True H1975_Epitope_Rep3 1213.5615173675699 1213.5604299358602 43.353 2 -0.09829851390284251 0.025167452736712774 0.9438714419765777 ['nc|ENSG00000106733|Q9NWW6-2|NMRK1', 'ENSG00000106733|ENST00000361092|NMRK1'] 27198 15200 FLSSFSGCLP True H1975_Epitope_Rep2 1056.49501803088 1056.49392993586 63.622 2 -0.09832579527748748 0.025186770505122566 0.9438714419765777 ['ADGRB2|p.C1012Sfs*79|1|0.17|ENSG00000121753|chr1:31736668-31736668|C/-|frameshift_variant'] 30004 17650 FYGPQVNNI True PC9_epitope_Rep4 1050.51344497634 1050.5123499358601 75.915 2 -0.09835491375567613 0.02520458913745616 0.9438714419765777 ['ENSG00000106299|ENST00000223023|WASL'] 77586 10318 NYTARFSRF True PC9_epitope_Rep2 1160.57269118796 1160.5710449037902 45.016 3 -0.09836525628998602 0.02520458913745616 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 25807 21120 FGANAILGV True PC9_epitope_Rep1 860.4756029156399 860.4750549679301 86.068 1 -0.0984009218878968 0.02520458913745616 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 7842 10795 ATAGVVTSV True PC9_epitope_Rep5 803.43888305375 803.43778993586 46.513 2 -0.0984356537246923 0.02520458913745616 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A', 'ENST00000537783.1_1_12:13044524-13062212:+|nuORF'] 49061 13470 KFPELNYQL True NCI_RA007_Epitope_Rep4 1150.60225998074 1150.60116993586 59.016 2 -0.09848415244178198 0.025223904256162322 0.9438714419765777 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000478276.1_1_17:40481763-40483548:-|nuORF'] 98417 23349 SIIPPLFTV True PC9_epitope_Rep2 985.58481901145 985.58427496793 95.286 1 -0.09853006586957536 0.025262532197344957 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 2832 3089 AEVKGSVSA True H1975_Epitope_Rep3 846.4446967101799 846.44358993586 16.38 2 -0.09854164111423186 0.025262532197344957 0.9438714419765777 ['ENST00000443199.6_1_17:73623504-73629591:-|nuORF', 'nc|ENSG00000108469|O94762-4|RECQL5', 'ENSG00000108469|ENST00000317905|RECQL5', 'ENST00000578865.5_1_17:73623504-73624919:-|nuORF'] 81972 8354 PSRPAAPSL True PC9_epitope_Rep5 894.49231560894 894.49120993586 37.076 2 -0.09860791746855403 0.02527984150569589 0.9438714419765777 ['ENSG00000169733|ENST00000310496|RFNG', 'ENST00000582478.5_1_17:80008786-80009642:-|nuORF'] 28048 17707 FRDAFTQEL True PC9_epitope_Rep5 1125.54547338061 1125.54436993586 73.127 2 -0.0986148699683467 0.02527984150569589 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 39514 6330 HPEPASGLAA True PC9_epitope_Rep5 948.4664947839199 948.46538993586 29.323 2 -0.09862728082514588 0.02527984150569589 0.9438714419765777 ['ENSG00000169710|ENST00000306749|FASN'] 15030 8766 EAAAAVVAAAA True H1975_Epitope_Rep2 913.4868958753299 913.48578993586 38.683 2 -0.09864005129444377 0.02527984150569589 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A'] 8495 7857 ATVGHGLTAV True PC9_epitope_Rep4 924.5028802926399 924.50178993586 37.638 2 -0.09866494742787742 0.02527984150569589 0.9438714419765777 ['ENSG00000197712|ENST00000358869|FAM114A1'] 105965 11244 SVLGKVNEI True PC9_epitope_Rep6 957.54949613189 957.54838993586 54.247 2 -0.09868760236193068 0.025297648527110285 0.9438714419765777 ['ENSG00000175203|ENST00000548249|DCTN2', 'nc|ENSG00000175203|Q13561-3|DCTN2', 'nc|ENSG00000175203|Q13561-2|DCTN2', 'ENST00000550988.5_1_12:57926276-57926769:-|nuORF'] 52517 5165 KPPPPPPPP True PC9_epitope_Rep1 922.5276384884999 922.52654993586 24.721 2 -0.09876524286817559 0.025297648527110285 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 34573 9583 GQFTGSTGV True PC9_epitope_Rep2 852.3977465177599 852.39664993586 42.205 2 -0.09876679947743017 0.025297648527110285 0.9438714419765777 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 43551 5791 IIEAEESR True NCI_RA007_Epitope_Rep2 945.47672511445 945.47562993586 27.144 2 -0.09879836753571182 0.025297648527110285 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000465508.5_1_1:6695737-6697639:-|nuORF', 'MED15-DNAJC11|1|fusion'] 83969 16791 QELPEFWEA True H1975_Epitope_Rep2 1147.51858992643 1147.51748993586 69.832 2 -0.0988619852201143 0.02531645569620253 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 40435 15786 HSAEQILEF True PC9_epitope_Rep4 1072.5189242795998 1072.51837496793 68.645 1 -0.0988655039354455 0.02531645569620253 0.9438714419765777 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'ENST00000418559.5_1_2:183617332-183641856:+|nuORF', 'ENST00000491074.5_1_2:183616895-183641856:+|nuORF'] 92061 7873 RPRVTEPISA True PC9_epitope_Rep3 1124.6302060640799 1124.62855490379 35.268 3 -0.09887306737642407 0.02532974214758189 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 52844 5397 KQYAGKYVL True NCI_RA007_Epitope_Rep3 1068.59678067748 1068.59568993586 28.239 2 -0.09888325520238836 0.02532974214758189 0.9438714419765777 ['ENST00000519214.5_1_5:150400805-150405029:+|nuORF', 'ENSG00000211445|ENST00000388825|GPX3'] 116923 14851 TYPDVNNSI True PC9_epitope_Rep5 1021.4716397340101 1021.47107496793 62.125 1 -0.09889393705894353 0.02532974214758189 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 4721 14981 ALDSTNVEL True PC9_epitope_Rep6 960.47639076128 960.47584496793 69.636 1 -0.098894740278566 0.02532974214758189 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 132660 5147 VYQNHVQHL True PC9_epitope_Rep5 1136.57269118796 1136.5710449037902 24.82 3 -0.09890788511807755 0.02532974214758189 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 21725 11357 ESAFRKLDELY True H1975_Epitope_Rep2 1369.6877805098497 1369.68613490379 48.733 3 -0.09891133445792467 0.02532974214758189 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF', 'ENST00000567229.5_1_15:66791747-66793486:-|nuORF'] 84278 12538 QEYFGSLAA True H1975_Epitope_Rep3 984.4552613938797 984.45416993586 53.427 2 -0.09892424456407958 0.02532974214758189 0.9438714419765777 ['ENST00000472295.1_1_20:3202423-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-3|ITPA', 'ENST00000490838.6_1_20:3193963-3204105:+|nuORF', 'nc|ENSG00000125877|Q9BY32-2|ITPA', 'ENSG00000125877|ENST00000380113|ITPA'] 17918 11478 EIEAELGI True H1975_Epitope_Rep2 872.4491133842798 872.4485649679301 49.206 1 -0.09892795167430433 0.02532974214758189 0.9438714419765777 ['nc|ENSG00000182938|Q7RTS5|OTOP3', 'ENSG00000182938|ENST00000328801|OTOP3'] 130579 5648 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 27.11 2 -0.09896541155719116 0.02532974214758189 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 64969 12509 LSDDGSWTAY True H1975_Epitope_Rep2 1113.46146897313 1113.4608749679298 53.208 1 -0.09900947405211329 0.02532974214758189 0.9438714419765777 ['DTX2|p.H232Tfs*122|1|0.12|ENSG00000091073|chr7:76482925-76482926|-/C|frameshift_variant', 'nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 23678 23818 EYGSIIAFF True PC9_epitope_Rep5 1045.51204799401 1045.51094993586 96.598 2 -0.0990197055598325 0.02532974214758189 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 37370 10945 GVYDVVELK True NCI_RA007_Epitope_Rep4 1020.5491617787198 1020.54806993586 48.963 2 -0.09903167833923918 0.02532974214758189 0.9438714419765777 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 70810 11103 MEENFAVEA True H1975_Epitope_Rep2 1038.4328116971399 1038.43170993586 47.742 2 -0.09903978071447708 0.02532974214758189 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM'] 94655 13576 RYLEGTSCI True PC9_epitope_Rep1 1040.4960806600398 1040.49498993586 57.076 2 -0.09910005052353231 0.025347538516376885 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 89328 8607 RELVKNWVP True NCI_RA007_Epitope_Rep5 1139.64512785223 1139.64349490379 39.783 3 -0.09912998256449479 0.025347538516376885 0.9438714419765777 ['ENSG00000127540|ENST00000591899|UQCR11'] 730 16132 AAVPGKTFVNI True PC9_epitope_Rep3 1115.63389446219 1115.63278993586 67.2 2 -0.09913624455042223 0.025347538516376885 0.9438714419765777 ['ENSG00000108518|ENST00000225655|PFN1', 'CON__P02584'] 95637 14875 SAVMALQEA True PC9_epitope_Rep5 918.44806783846 918.44696993586 62.22 2 -0.09913675868526678 0.025347538516376885 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E98K|1|0.33|ENSG00000277775|chr6:26250314-26250314|C/T|missense_variant', 'H3C10|p.S87C|1|0.58|ENSG00000278828|chr6:27810332-27810332|A/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 35201 10628 GSEYLKLGY True H1975_Epitope_Rep2 1028.51786165044 1028.51676993586 45.904 2 -0.09921226482261034 0.025365834339914062 0.9438714419765777 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D', 'ENST00000462641.1_1_22:36907036-36908721:-|nuORF'] 26099 10098 FHEPSQEL True PC9_epitope_Rep3 985.4505103666098 985.44940993586 43.796 2 -0.09928110013080199 0.025365834339914062 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 23536 16926 EWSPYTKIFQF True NCI_RA007_Epitope_Rep3 1444.7027022979998 1444.70160993586 74.444 2 -0.09928863553967388 0.025365834339914062 0.9438714419765777 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000480769.5_1_1:185267169-185274781:-|nuORF', 'ENST00000459929.5_1_1:185267169-185275646:-|nuORF', 'ING3-IVNS1ABP|1|fusion'] 55603 7605 LCRHM[Oxidation]QSILY True H1975_Epitope_Rep2 1278.62129863694 1278.6202099358602 34.205 2 -0.09930052621200286 0.02538513326204903 0.9438714419765777 ['RUBCN|p.D60H|1|0.2|ENSG00000145016|chr3:197718018-197718018|C/G|missense_variant'] 109743 9719 THGPPVQL True PC9_epitope_Rep5 847.45520182423 847.45410993586 42.352 2 -0.09934389745969342 0.025402419466608588 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 136131 15848 YGGLIFNSY True H1975_Epitope_Rep1 1032.4916469026 1032.4905499358601 66.267 2 -0.09935459234851587 0.025402419466608588 0.9438714419765777 ['ENSG00000198712|ENST00000361739|MT-CO2'] 31688 6313 GEIEYEVQR True NCI_RA007_Epitope_Rep4 1121.53530261973 1121.5342099358602 30.888 2 -0.09937031240279859 0.025402419466608588 0.9438714419765777 ['ENSG00000173546|ENST00000308508|CSPG4'] 56681 12442 LEADMRRAL True PC9_epitope_Rep3 1073.56516327937 1073.56406993586 52.883 2 -0.09940347033758438 0.025402419466608588 0.9438714419765777 ['ENSG00000186326|ENST00000334176|RGS9BP'] 134218 9896 WRRAWWGL True NCI_RA007_Epitope_Rep3 1129.59336706289 1129.5917249037902 46.006 3 -0.09944513186685769 0.025402419466608588 0.9438714419765777 ['ENST00000545797.6_1_19:3958504-3958831:-|nuORF'] 104968 20755 STIAILNSV True PC9_epitope_Rep5 916.5229470308801 916.52184993586 84.886 2 -0.09946696431471182 0.02541970224897054 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 131331 14057 VVRNEQVEI True PC9_epitope_Rep3 1084.58767254576 1084.58656993586 59.161 2 -0.09949198095547193 0.02541970224897054 0.9438714419765777 ['ENSG00000125730|ENST00000245907|C3', 'CON__Q2UVX4'] 136388 12427 YHDYGHLEL True PC9_epitope_Rep2 1145.51417325233 1145.51251490379 53.108 3 -0.09955359619964924 0.02541970224897054 0.9438714419765777 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 44916 6374 IQDSRTLP True PC9_epitope_Rep2 928.4977949122 928.49668993586 29.921 2 -0.09956036945702564 0.02541970224897054 0.9438714419765777 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 136711 22100 YIITEIPSL True PC9_epitope_Rep2 1047.58521293427 1047.5841099358602 90.479 2 -0.09959740821455258 0.02541970224897054 0.9438714419765777 ['nc|ENSG00000155085|Q5TCS8-2|AK9', 'nc|ENSG00000155085|Q5TCS8-1|AK9', 'nc|ENSG00000155085|Q5TCS8-3|AK9', 'nc|ENSG00000155085|Q5TCS8-6|AK9', 'ENSG00000155085|ENST00000424296|AK9'] 114827 17270 TTDFIYQLY True H1975_Epitope_Rep3 1162.55464108198 1162.55354993586 72.074 2 -0.09972712604646934 0.02543849229916459 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 3903 15443 AHDDSVMYL True PC9_epitope_Rep1 1049.44879611445 1049.4476899358601 64.222 2 -0.09972959939348795 0.02543849229916459 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 107394 16371 SYSTLTGSL True PC9_epitope_Rep4 927.45492704071 927.45382993586 70.934 2 -0.099760674510082 0.025456273011599827 0.9438714419765777 ['ENSG00000115165|ENST00000264192|CYTIP', 'CYTIP|p.L61*|1|0.39|ENSG00000115165|chr2:157434740-157434740|A/-|frameshift_variant', 'ENST00000483929.1_1_2:158291208-158300532:-|nuORF', 'ENST00000462109.1_1_2:158290860-158300532:-|nuORF'] 35375 16576 GTASGFYTV True PC9_epitope_Rep3 901.4181476091701 901.4175949679301 68.898 1 -0.09977658229399398 0.025456273011599827 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 61373 16354 LLEKELESV True PC9_epitope_Rep1 1058.58594121026 1058.5848499358601 67.726 2 -0.09979840134272389 0.025456273011599827 0.9438714419765777 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF'] 129145 10922 VTDDALVY True H1975_Epitope_Rep3 894.4334633201399 894.43236993586 47.099 2 -0.09979877544403964 0.025456273011599827 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'nc|ENSG00000188372|P21754-2|ZP3'] 106525 14485 SVVSDILFK True NCI_RA007_Epitope_Rep1 1006.5698972233 1006.56880993586 60.388 2 -0.09982553516624891 0.025466489898490215 0.9438714419765777 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-3|TBC1D2B', 'ENST00000472786.1_1_15:78295640-78309087:-|nuORF'] 112310 8403 TMDPKPLAY True H1975_Epitope_Rep2 1034.5106680950198 1034.50956993586 37.275 2 -0.09984621430869793 0.025466489898490215 0.9438714419765777 ['ENSG00000163328|ENST00000392552|GPR155'] 29868 16648 FVWSGTAEA True PC9_epitope_Rep6 966.4446967101799 966.44358993586 76.505 2 -0.0998913666059575 0.025466489898490215 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 139339 2785 YTDSSYEEKKY True H1975_Epitope_Rep2 1411.61434078607 1411.61269490379 14.743 3 -0.0998963975513897 0.025466489898490215 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 110885 21851 TLAGALLALYL True PC9_epitope_Rep5 1117.6746966450098 1117.67358993586 89.085 2 -0.10002499486733095 0.025466489898490215 0.9438714419765777 ['ENSG00000259803|ENST00000682282|SLC22A31', 'nc|ENSG00000259803|A6NKX4|SLC22A31'] 6953 14499 AQLTSTPAI True PC9_epitope_Rep5 900.4916469026 900.49054993586 60.77 2 -0.10005090014470652 0.025466489898490215 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A'] 53440 14562 KVIDEIYRV True PC9_epitope_Rep3 1133.64445914589 1133.64280490379 61.141 3 -0.10008848233152673 0.025466489898490215 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 37142 16459 GVTEVLHGL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 71.279 2 -0.10010638097859513 0.025466489898490215 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1'] 96560 12449 SELPIVTPA True H1975_Epitope_Rep3 925.51204799401 925.51149496793 53.077 1 -0.10013604712984069 0.025466489898490215 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 106955 13575 SYLDRVRSL True PC9_epitope_Rep4 1107.60365696307 1107.60254993586 60.109 2 -0.10013994669287359 0.025466489898490215 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000506277.1_1_5:36885388-36885895:+|nuORF', 'ENST00000510337.1_1_5:122971848-122972142:+|nuORF', 'ENST00000411618.1_1_9:30800375-30800732:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF', 'ENST00000402024.2_1_6:116779363-116779789:-|nuORF'] 131616 18301 VVYQDGFYGA True PC9_epitope_Rep1 1117.50802524273 1117.5069299358602 75.183 2 -0.10014383724009052 0.025466489898490215 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 16281 14909 EEIKDFLLTA True H1975_Epitope_Rep2 1177.6230549949698 1177.6219499358601 62.5 2 -0.10021908071328049 0.025466489898490215 0.9438714419765777 ['ENSG00000172809|ENST00000311111|RPL38', 'ENST00000529123.2_1_17:72199871-72200367:+|nuORF', 'ENST00000530646.1_1_17:72199871-72200367:+|nuORF'] 33672 10766 GLPRELAEA True PC9_epitope_Rep4 954.5134449763399 954.51234993586 49.17 2 -0.10022125412057498 0.025466489898490215 0.9438714419765777 ['ENSG00000126261|ENST00000246548|UBA2'] 105676 9871 SVGGGLGGLLL True NCI_RA007_Epitope_Rep5 941.55458151233 941.55348993586 44.615 2 -0.10022916997901699 0.025466489898490215 0.9438714419765777 ['nc|ENSG00000132677|Q9H310-3|RHBG', 'nc|ENSG00000132677|Q9H310-4|RHBG', 'nc|ENSG00000132677|Q9H310-2|RHBG', 'RHBG|p.P424Tfs*19|1|0.27|ENSG00000132677|chr1:156384561-156384562|-/A|frameshift_variant', 'ENSG00000132677|ENST00000537040|RHBG'] 24420 3834 FAGDDAPR True H1975_Epitope_Rep1 847.38243080679 847.38132993586 19.38 2 -0.10024132034034637 0.025466489898490215 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'POTEF|p.G720C|1|0.31|ENSG00000196604|chr2:130075314-130075314|C/A|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 136476 14436 YHHGYSYIL True PC9_epitope_Rep3 1151.53999407735 1151.5383449037902 60.633 3 -0.10027633216403958 0.025466489898490215 0.9438714419765777 ['ENSG00000134531|ENST00000256951|EMP1'] 24471 21737 FAIDPHLLL True PC9_epitope_Rep2 1037.59096702105 1037.5898699358602 89.089 2 -0.1002912978002001 0.025466489898490215 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 82209 5274 PTGVRSWRLR True NCI_RA007_Epitope_Rep3 1226.6996230365799 1226.69797490379 27.75 3 -0.10034719589759956 0.025466489898490215 0.9438714419765777 ['ENSG00000183304|ENST00000381003|FAM9A'] 123343 17474 VHVVDFFNR True PC9_epitope_Rep5 1131.58252759567 1131.5814299358601 72.216 2 -0.10038573203397612 0.025466489898490215 0.9438714419765777 ['ENSG00000172081|ENST00000357066|MOB3A', 'ENSG00000120162|ENST00000262244|MOB3B', 'ENSG00000142961|ENST00000319928|MOB3C'] 97151 17044 SFFLSCSLCL True NCI_RA007_Epitope_Rep3 1118.5140392233 1118.5129499358602 74.905 2 -0.10042583695989661 0.02552534726344533 0.9438714419765777 ['ENST00000581424.1_1_17:61228485-61228857:+|nuORF'] 119989 11289 VFAHTDNMVF True NCI_RA007_Epitope_Rep3 1179.5382798251899 1179.5371899358602 51.517 2 -0.10044041707518234 0.02554361805267011 0.9438714419765777 ['ENSG00000179913|ENST00000318683|B3GNT3'] 39438 17519 HMVMADIYL True PC9_epitope_Rep6 1091.5143735764698 1091.51326993586 80.018 2 -0.1004794588078476 0.02554361805267011 0.9438714419765777 ['nc|ENSG00000290649|Q8NH63|OR51H1'] 30253 17758 GAAGTVFTTV True PC9_epitope_Rep1 922.47599683846 922.47488993586 73.103 2 -0.10048209735604187 0.02554361805267011 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 87816 20135 QVIPQFQTV True PC9_epitope_Rep1 1058.5760452328998 1058.57547496793 82.28 1 -0.10049728972240642 0.02556138094767039 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 96121 7822 SEDTMLNGP True H1975_Epitope_Rep2 962.40151156886 962.40040993586 35.035 2 -0.10053835855196842 0.02556138094767039 0.9438714419765777 ['ENSG00000146281|ENST00000275072|PM20D2'] 265 5789 AAGPPVEERFR True PC9_epitope_Rep3 1227.63601972051 1227.6343649037901 27.338 3 -0.10056429121554239 0.02556138094767039 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 132602 11003 VYPPPHQVF True PC9_epitope_Rep6 1082.5549158654999 1082.55380993586 53.217 2 -0.10065334460526786 0.02556138094767039 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 124336 4012 VLDQQQTPSR True NCI_RA007_Epitope_Rep2 1170.59929985862 1170.59820993586 20.244 2 -0.10068488070128377 0.025580659201519407 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 96335 5223 SEFESKVSA True H1975_Epitope_Rep3 982.4607406971398 982.4596499358599 25.177 2 -0.10072901205012626 0.025618199802176063 0.9438714419765777 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 115158 7142 TVAEKVDAV True PC9_epitope_Rep5 930.5022115862998 930.50110993586 32.44 2 -0.10073705600450118 0.025618199802176063 0.9438714419765777 ['ENST00000453705.1_3_X:154299864-154348422:+|nuORF', 'ENSG00000185515|ENST00000330045|BRCC3', 'nc|ENSG00000185515|P46736-3|BRCC3', 'nc|ENSG00000185515|P46736|BRCC3', 'nc|ENSG00000185515|P46736-5|BRCC3'] 77621 11420 NYVEVTRKW True PC9_epitope_Rep5 1193.61930702721 1193.61820993586 48.926 2 -0.10074191398848305 0.025618199802176063 0.9438714419765777 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1'] 692 15061 AAVEWFDGK True PC9_epitope_Rep2 1021.4868958753298 1021.48578993586 63.189 2 -0.10074590286412237 0.025618199802176063 0.9438714419765777 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 81302 6063 PPQPPPPPP True NCI_RA007_Epitope_Rep5 922.4912529797799 922.49014993586 30.003 2 -0.10081483464726126 0.025636967874663713 0.9438714419765777 ['HOXD3|p.Q115K|1|0.11|ENSG00000128652|chr2:176169457-176169457|C/A|missense_variant', 'ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000168066|Q15637-5|SF1', 'MARCHF11|p.R187Dfs*15|1|0.2|ENSG00000183654|chr5:16177860-16177860|G/-|frameshift_variant', 'ENSG00000183654|ENST00000332432|MARCHF11', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'ENSG00000165556|ENST00000381020|CDX2', 'nc|ENSG00000288658|A0A7I2V3R4|RNF228', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000128652|ENST00000683222|HOXD3', 'DGKD-ATG16L1|2|fusion', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 95617 13095 SATSLLHTV True PC9_epitope_Rep5 927.5025459394701 927.50144993586 55.374 2 -0.10082610183759805 0.025636967874663713 0.9438714419765777 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 45065 13425 IQQNLEQEK True PC9_epitope_Rep1 1128.5775017848798 1128.57640993586 56.5 2 -0.10086732925337741 0.025653704656038608 0.9438714419765777 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 5619 6586 APAEEPAAAAA True PC9_epitope_Rep1 967.4610750503098 967.46052496793 30.138 1 -0.10088435277774344 0.025653704656038608 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 70823 4968 MEERAQLEA True H1975_Epitope_Rep1 1075.4968089360298 1075.49570993586 24.185 2 -0.1008847011423374 0.025653704656038608 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2'] 33290 13689 GLATDVQTV True PC9_epitope_Rep2 902.47091145802 902.4703649679301 57.946 1 -0.10091311719748115 0.025653704656038608 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 28678 14007 FSSSKLESISL True PC9_epitope_Rep6 1196.6288686514 1196.6272349037902 65.733 3 -0.10094565246225194 0.025653704656038608 0.9438714419765777 ['ENST00000557373.1_1_14:35344887-35344989:+|nuORF'] 125024 19333 VLPDDLSGV True PC9_epitope_Rep2 913.47566248529 913.47456993586 79.738 2 -0.1009494475442922 0.025653704656038608 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 132107 11934 VYINTAQEF True NCI_RA007_Epitope_Rep4 1083.5236753068698 1083.52256993586 52.904 2 -0.10098229813698786 0.02567246835443038 0.9438714419765777 ['nc|ENSG00000095059|P49366-3|DHPS', 'ENSG00000095059|ENST00000210060|DHPS', 'ENST00000600510.1_1_19:12786654-12786995:-|nuORF'] 91956 9495 RPPPIGAEV True PC9_epitope_Rep5 934.5236157372199 934.52250993586 41.479 2 -0.10098665454599519 0.02567246835443038 0.9438714419765777 ['nc|ENSG00000143384|Q07820-2|MCL1', 'ENSG00000143384|ENST00000369026|MCL1'] 5102 17063 ALLSSLARC True PC9_epitope_Rep5 932.51133680136 932.51022993586 70.651 2 -0.10101785474058975 0.025687166304132886 0.9438714419765777 ['nc|ENSG00000107789|Q9UNW1-3|MINPP1', 'nc|ENSG00000107789|Q9UNW1-2|MINPP1', 'MINPP1|p.S472Vfs*6|1|0.27|ENSG00000107789|chr10:87552426-87552426|C/-|frameshift_variant', 'ENSG00000107789|ENST00000371996|MINPP1'] 9 6179 AAAAAAAAAAA True PC9_epitope_Rep5 799.41881631551 799.41770993586 28.751 2 -0.10104546230405823 0.025687166304132886 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 70400 22039 LYQFNPAFF True PC9_epitope_Rep4 1145.5545815123298 1145.5540749679299 92.994 1 -0.10109244340433875 0.025687166304132886 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'EIF3K|p.D122Mfs*10|1|0.09|ENSG00000178982|chr19:38632438-38632438|G/-|frameshift_variant', 'ENST00000586932.5_1_19:39109833-39116793:+|nuORF', 'ENST00000593062.5_1_19:39109833-39121488:+|nuORF', 'nc|ENSG00000178982|Q9UBQ5-2|EIF3K', 'ENSG00000178982|ENST00000248342|EIF3K'] 52317 12411 KPANVFITA True PC9_epitope_Rep3 959.54401682863 959.54346496793 52.769 1 -0.10111509761809889 0.025687166304132886 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 118508 13450 VDSQILYY True H1975_Epitope_Rep2 999.49131254943 999.49020993586 56.869 2 -0.10112488838645889 0.025687166304132886 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 130760 16410 VVDSGAGFTV True PC9_epitope_Rep2 950.4709114580199 950.46980993586 68.365 2 -0.10112903955134768 0.025687166304132886 0.9438714419765777 ['ENSG00000110375|ENST00000264031|UPK2', 'ENST00000534788.1_1_11:118795899-118828340:+|nuORF'] 29243 16401 FVDEPLIHATT True PC9_epitope_Rep5 1241.6292030045697 1241.62810993586 68.085 2 -0.10124234632362918 0.025687166304132886 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 63174 9422 LNSVVQSV True PC9_epitope_Rep5 844.4654321547599 844.46432993586 41.196 2 -0.10126761378820914 0.025687166304132886 0.9438714419765777 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 16196 9248 EEFEKVMVA True NCI_RA007_Epitope_Rep3 1080.5161473982798 1080.5150499358601 43.481 2 -0.1012854539011859 0.025687166304132886 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 67087 10374 LTCVGQGTV True PC9_epitope_Rep1 876.43750315476 876.43640993586 44.788 2 -0.10129227993849521 0.025687166304132886 0.9438714419765777 ['ENSG00000161996|ENST00000293879|WDR90', 'ENST00000546516.5_1_16:705169-713132:+|nuORF', 'ENST00000552728.5_1_16:708591-715679:+|nuORF', 'ENST00000552683.5_1_16:707859-713132:+|nuORF', 'ENST00000547407.5_1_16:711076-715728:+|nuORF', 'ENST00000549024.5_1_16:711101-717586:+|nuORF'] 17607 19470 EHLTTFVL True PC9_epitope_Rep3 958.5123823471799 958.51128993586 80.12 2 -0.10130304538038429 0.025705924226844895 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8'] 7335 8335 ARTPPIINA True PC9_epitope_Rep2 951.55016483823 951.54906993586 37.431 2 -0.10136323255382863 0.025705924226844895 0.9438714419765777 ['nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-2|TMEM132B', 'ENST00000534945.2_1_12:125834026-126068624:+|nuORF'] 96883 7239 SETAAIPSA True NCI_RA007_Epitope_Rep4 845.4130622287299 845.4125149679301 34.479 1 -0.10139856971720915 0.02572213764605864 0.9438714419765777 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 96556 12525 SELPIVTPA True H1975_Epitope_Rep1 925.51204799401 925.51149496793 53.221 1 -0.10143884857603436 0.02572213764605864 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 108928 7986 TETDSLVSA True H1975_Epitope_Rep3 921.4291062156899 921.42800993586 35.688 2 -0.10148253531695736 0.02572213764605864 0.9438714419765777 ['nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183881502-183882771:+|nuORF'] 980 8400 AEAAVVAVA True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 37.263 1 -0.10149308478964605 0.02572213764605864 0.9438714419765777 ['ENSG00000211450|ENST00000534355|SELENOH'] 2038 13816 AELDSVFSSA True H1975_Epitope_Rep2 1024.47130538084 1024.4707749679299 58.29 1 -0.10154417205336175 0.02572213764605864 0.9438714419765777 ['nc|ENSG00000173744|P52594-2|AGFG1', 'ENSG00000173744|ENST00000310078|AGFG1', 'nc|ENSG00000173744|P52594-3|AGFG1', 'nc|ENSG00000173744|P52594-4|AGFG1'] 84231 4499 QEVEKVQPP True H1975_Epitope_Rep2 1052.5502244078798 1052.54912993586 22.417 2 -0.10154507951512666 0.02572213764605864 0.9438714419765777 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 52127 16002 KLSRFFDKV True PC9_epitope_Rep5 1138.6498788795 1138.6482449037899 66.542 3 -0.10155324222097344 0.02572213764605864 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000144840|ENST00000273375|RABL3'] 92644 17035 RRFMQTFVL True PC9_epitope_Rep4 1196.64883333368 1196.64772993586 73.517 2 -0.10158571409490191 0.025737837784411015 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 125029 24150 VLPDMFFSF True PC9_epitope_Rep3 1101.5205045027299 1101.51940993586 98.18 2 -0.10160454219843078 0.025737837784411015 0.9438714419765777 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 5655 8444 APAKSLVGQVA True PC9_epitope_Rep2 1039.6025943339098 1039.6014899358602 37.848 2 -0.10160763635298849 0.025737837784411015 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 134069 14053 WQLQDDKNQSL True PC9_epitope_Rep2 1373.6575430107298 1373.65644993586 59.333 2 -0.1016461351233739 0.025737837784411015 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2'] 11611 13743 DHARLQLQL True PC9_epitope_Rep2 1092.60399131624 1092.60288993586 58.15 2 -0.10166146596273273 0.025737837784411015 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 34548 16455 GQFDGLVEL True NCI_RA007_Epitope_Rep4 976.48656152216 976.48601496793 71.332 1 -0.10169187517716521 0.025737837784411015 0.9438714419765777 ['nc|ENSG00000074370|Q93084-4|ATP2A3', 'ENSG00000074370|ENST00000397041|ATP2A3', 'nc|ENSG00000074370|Q93084-3|ATP2A3', 'nc|ENSG00000074370|Q93084-7|ATP2A3', 'nc|ENSG00000074370|Q93084-1|ATP2A3', 'nc|ENSG00000074370|Q93084-6|ATP2A3', 'nc|ENSG00000074370|Q93084-5|ATP2A3'] 85964 18606 QPFGDHIISV True PC9_epitope_Rep1 1111.56620882519 1111.5651099358602 76.355 2 -0.10172000341072372 0.025737837784411015 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 22806 8831 EVDSVVAAEY True H1975_Epitope_Rep1 1080.4975201286798 1080.49642993586 38.891 2 -0.10174081789560338 0.025737837784411015 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 140295 11929 YYDKHFTEF True PC9_epitope_Rep4 1248.54513902744 1248.5440499358601 53.669 2 -0.10176294880405759 0.02575658740042302 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 54453 7565 KYVPAIAHL True NCI_RA007_Epitope_Rep3 1010.5913013742199 1010.59020993586 36.881 2 -0.10176355841353474 0.02575658740042302 0.9438714419765777 ['ENSG00000106066|ENST00000265394|CPVL'] 115685 21126 TVLDAIYEV True PC9_epitope_Rep4 1021.53317736141 1021.53208993586 89.424 2 -0.10182371863224897 0.02577533553398826 0.9438714419765777 ['ENSG00000180346|ENST00000603357|TIGD2'] 135010 11304 YAGSGNVL True PC9_epitope_Rep3 779.38136817763 779.38026993586 48.486 2 -0.1018253099952588 0.02577533553398826 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 83232 16929 QAAQLLQV True PC9_epitope_Rep4 869.49706663621 869.49651496793 73.104 1 -0.10187495662714605 0.025791533262184276 0.9438714419765777 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 28880 18101 FTDVNKIYL True PC9_epitope_Rep3 1111.5913609438699 1111.59026993586 74.821 2 -0.10189400259046724 0.025791533262184276 0.9438714419765777 ['ENSG00000101337|ENST00000398022|TM9SF4', 'TM9SF4-HM13|8|fusion', 'TM9SF4-HM13|7|fusion', 'TM9SF4-HM13|2|fusion', 'TM9SF4-HM13|9|fusion', 'TM9SF4-HM13|1|fusion', 'TM9SF4-HM13|3|fusion'] 52529 2547 KPPPPPPPP True PC9_epitope_Rep4 922.5276384884999 922.52654993586 14.717 2 -0.101905029876654 0.025791533262184276 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 101023 21170 SLTGVPILVV True PC9_epitope_Rep5 996.6219327961599 996.62082993586 86.48 2 -0.10192086000651035 0.025791533262184276 0.9438714419765777 ['ENSG00000250510|ENST00000311268|GPR162'] 5739 5171 APDEKYVAA True PC9_epitope_Rep4 962.4709114580199 962.46980993586 26.582 2 -0.1019568567204658 0.025791533262184276 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 95335 8168 SAGGFLGVK True NCI_RA007_Epitope_Rep4 834.4599528514999 834.45884993586 38.207 2 -0.10197588441653951 0.025791533262184276 0.9438714419765777 ['ENST00000426740.6_3_1:161514508-161514637:-|nuORF'] 101742 12463 SPHGIIVIA True PC9_epitope_Rep6 905.5334521449299 905.53234993586 59.365 2 -0.10201969115930015 0.025791533262184276 0.9438714419765777 ['ENST00000438068.6_1_4:39757332-39776525:+|nuORF'] 103160 10621 SQNKNIEVL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 51.67 2 -0.10207177858776921 0.025807216535588665 0.9438714419765777 ['OR4P4|p.G14W|1|0.64|ENSG00000181927|chr11:55638397-55638397|G/T|missense_variant', 'OR4P4|p.T237Lfs*6|2|0.14|ENSG00000181927|chr11:55639064-55639064|C/-|frameshift_variant', 'ENSG00000181927|ENST00000641760|OR4P4'] 91516 7434 RPAAGFVA True PC9_epitope_Rep5 787.4340724568299 787.43296993586 33.549 2 -0.10207186092755738 0.025807216535588665 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 107513 9007 TAAPSPLRL True H1975_Epitope_Rep3 924.53926580136 924.5387149679301 39.641 1 -0.10212442941612221 0.025807216535588665 0.9438714419765777 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 74164 8593 NHYQKQLEI True PC9_epitope_Rep3 1171.5985715826298 1171.59746993586 38.004 2 -0.10219772047892155 0.025807216535588665 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 54002 9110 KYLEERAMRQF True PC9_epitope_Rep6 1469.74491854649 1469.74327490379 45.134 3 -0.10221715259989962 0.025807216535588665 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 113137 16199 TQAPPNVVL True PC9_epitope_Rep3 937.5232813840499 937.52218993586 67.448 2 -0.10224584789927228 0.025807216535588665 0.9438714419765777 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 108353 3071 TEDPNHLPP True H1975_Epitope_Rep2 1018.4719740871799 1018.47086993586 16.198 2 -0.10229152247516461 0.025807216535588665 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 5816 6215 APFPHGDSA True PC9_epitope_Rep5 897.3980808709299 897.39698993586 28.887 2 -0.10231776399173233 0.025807216535588665 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9'] 59547 6223 LGQYRAGRP True H1975_Epitope_Rep3 1016.5515618205599 1016.55046993586 28.949 2 -0.10246790763236249 0.02586445366528354 0.9438714419765777 ['ENSG00000103404|ENST00000219689|USP31'] 98839 6786 SITTVQIQK True NCI_RA007_Epitope_Rep2 1016.5866099166 1016.58550993586 31.012 2 -0.10247647705863412 0.02586445366528354 0.9438714419765777 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 5690 2548 APAPPKAEA True PC9_epitope_Rep4 850.4548674710599 850.45376993586 14.719 2 -0.10248370815624191 0.02586445366528354 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000582736.1_1_17:27047023-27047984:+|nuORF', 'RPL23A|p.G31Efs*34|1|0.1|ENSG00000198242|chr17:28720770-28720792|AAGGTGTCCACAGCCACAAAAAG/-|frameshift_variant', 'ENST00000399247.6_1_6:29694709-29694913:-|nuORF', 'ENST00000606975.1_1_8:163470-182153:-|nuORF'] 19444 7354 ELPRSAQTQGS True NCI_RA007_Epitope_Rep2 1172.5785644140399 1172.57746993586 33.228 2 -0.10249075512784503 0.02586445366528354 0.9438714419765777 ['ENST00000396008.2_1_22:46447675-46449969:-|nuORF'] 125968 10016 VPAGGAVAV True PC9_epitope_Rep5 739.42283906679 739.42229496793 43.505 1 -0.10250445661937421 0.025883189757369793 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 12208 17548 DINTDGAVNF True PC9_epitope_Rep6 1064.47745339044 1064.47634993586 80.138 2 -0.10250690400357652 0.025883189757369793 0.9438714419765777 ['ENSG00000143546|ENST00000368733|S100A8'] 48617 5768 KEIHVNIEA True H1975_Epitope_Rep1 1051.56620882519 1051.5651099358602 27.258 2 -0.10260595582555983 0.025937851879654687 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 98099 20305 SIAASSIVTL True PC9_epitope_Rep4 960.54916177872 960.54806993586 86.246 2 -0.10262174386655991 0.025937851879654687 0.9438714419765777 ['ENSG00000205678|ENST00000381210|TECRL'] 98594 16233 SINKNSWFFGP True PC9_epitope_Rep3 1295.6298717109098 1295.62822490379 67.579 3 -0.10263618752322455 0.025937851879654687 0.9438714419765777 ['ENSG00000145332|ENST00000273963|KLHL8', 'nc|ENSG00000145332|Q9P2G9-2|KLHL8'] 38294 18826 HFLDRHLVF True PC9_epitope_Rep5 1182.62981214126 1182.6281549037901 77.429 3 -0.10268581134196422 0.025937851879654687 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF', 'ENST00000519030.5_1_8:109252301-109260916:-|nuORF'] 17086 9130 EGRDTHYLI True PC9_epitope_Rep4 1102.54072235334 1102.5396299358601 42.705 2 -0.10269703214828146 0.025937851879654687 0.9438714419765777 ['TENM1|p.F2575L|1|0.89|ENSG00000009694|chrX:124380991-124380991|A/G|missense_variant'] 107490 9958 TAAHGLEL True PC9_epitope_Rep1 810.42356734278 810.42246993586 43.166 2 -0.10275235704182915 0.025937851879654687 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 52769 5227 KQQAPPPPP True H1975_Epitope_Rep3 958.5236157372198 958.52250993586 25.191 2 -0.10278182894810553 0.025937851879654687 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant'] 38107 7156 HEPEPHIL True PC9_epitope_Rep2 970.4872302285 970.48612993586 32.918 2 -0.10278240909823558 0.025937851879654687 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 94286 17543 RWSPVRPLVF True PC9_epitope_Rep6 1255.71896149883 1255.71786993586 80.119 2 -0.10279597210716643 0.025937851879654687 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 13860 10233 DRATLAAL True PC9_epitope_Rep6 829.4657665079299 829.46521496793 50.018 1 -0.10284952987390451 0.025974795559593884 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 108134 7504 TDPVDIYK True H1975_Epitope_Rep3 949.47566248529 949.47456993586 33.845 2 -0.10285306405221234 0.025974795559593884 0.9438714419765777 ['ENSG00000140575|ENST00000268182|IQGAP1'] 76941 15704 NVPDSFNEV True PC9_epitope_Rep4 1019.45598966987 1019.45488993586 68.332 2 -0.10291050591144425 0.025974795559593884 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 102699 15529 SQDPTMIGV True PC9_epitope_Rep4 946.44298245802 946.44243496793 67.656 1 -0.10295096111928875 0.025974795559593884 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF'] 5902 9941 APGYSYTAA True PC9_epitope_Rep2 899.4024975450299 899.40194496793 43.568 1 -0.10297167681849864 0.025974795559593884 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS'] 63994 20402 LQAPPLTSL True PC9_epitope_Rep5 938.5436824754601 938.5431349679301 83.514 1 -0.1029979044758579 0.025990954515829598 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 107125 17621 SYMLVNENRF True PC9_epitope_Rep1 1271.5968573304701 1271.59522490379 72.571 3 -0.10305923001210392 0.025990954515829598 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 14085 10004 DSDPLQDHNMY True H1975_Epitope_Rep2 1333.5244802358502 1333.5233899358602 43.47 2 -0.10308095634880046 0.025990954515829598 0.9438714419765777 ['ENSG00000010404|ENST00000340855|IDS'] 38639 18110 HHLIVITSL True PC9_epitope_Rep5 1031.6127650947901 1031.6116699358602 74.672 2 -0.10309492246381007 0.025990954515829598 0.9438714419765777 ['nc|ENSG00000133318|O95197-5|RTN3'] 72886 11886 NATTVVTTV True PC9_epitope_Rep5 904.48656152216 904.48546993586 50.718 2 -0.10312501811533628 0.025990954515829598 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 63451 15566 LPGVDALSNI True H1975_Epitope_Rep3 997.5444107514501 997.54330993586 65.292 2 -0.10315437277712942 0.025990954515829598 0.9438714419765777 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENST00000476531.1_1_X:77380729-77381324:+|nuORF'] 88039 14638 QVTNEFQTV True PC9_epitope_Rep5 1064.51383889916 1064.5132749679299 61.306 1 -0.10317653816138977 0.025990954515829598 0.9438714419765777 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 59957 16605 LHLYLSHSIF True PC9_epitope_Rep4 1228.6604435632 1228.65880490379 71.846 3 -0.1032619499436926 0.026005054892978437 0.9438714419765777 ['ENST00000592643.5_1_17:73774540-73774585:-|nuORF'] 71884 4874 M[Oxidation]PNGDHIVSA True PC9_epitope_Rep4 1055.47059456863 1055.46948993586 25.338 2 -0.10327928179964088 0.026005054892978437 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'nc|ENSG00000007168|P43034-2|PAFAH1B1', 'ENST00000572915.6_1_17:2573570-2586914:+|nuORF'] 88773 5182 RDKLKFPTR True NCI_RA007_Epitope_Rep4 1159.6825759901099 1159.68094490379 26.461 3 -0.10334543127335953 0.026005054892978437 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A'] 119110 13098 VEIILHVV True NCI_RA007_Epitope_Rep4 920.5695033004799 920.56840993586 57.479 2 -0.1033751019409748 0.026005054892978437 0.9438714419765777 ['ENSG00000185627|ENST00000532097|PSMD13', 'nc|ENSG00000185627|Q9UNM6-2|PSMD13', 'ENST00000534590.5_1_11:244044-244236:+|nuORF', 'ENST00000527047.5_1_11:237024-247462:+|nuORF'] 43673 9528 IINEPTAAA True PC9_epitope_Rep5 898.4759968384599 898.47488993586 41.608 2 -0.10342121740209316 0.026005054892978437 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'HSPA2|p.D209Rfs*26|1|0.14|ENSG00000126803|chr14:64541469-64541470|-/T|frameshift_variant', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'HSPA2|p.A183S|1|0.29|ENSG00000126803|chr14:64541396-64541396|G/T|missense_variant', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENSG00000044574|ENST00000324460|HSPA5'] 48859 16356 KESNDLLLIR True PC9_epitope_Rep5 1199.68738658703 1199.68573490379 67.911 3 -0.10342692210668947 0.026005054892978437 0.9438714419765777 ['ENSG00000023445|ENST00000263464|BIRC3'] 128327 15249 VSDGVPLVL True NCI_RA007_Epitope_Rep4 897.5171333744499 897.51658496793 66.292 1 -0.10342752892763753 0.026005054892978437 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'ENST00000476095.5_1_3:47048543-47048780:+|nuORF'] 123491 14934 VIGPPVVL True H1975_Epitope_Rep1 792.5109257952 792.51037496793 62.683 1 -0.10344915157906626 0.026005054892978437 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 63266 21676 LPALSLLAA True PC9_epitope_Rep2 867.5429541994699 867.54184993586 88.854 2 -0.10347905490577318 0.026005054892978437 0.9438714419765777 ['ENST00000311626.8_1_17:46629537-46651367:-|nuORF'] 34087 11619 GPAAAFTAA True PC9_epitope_Rep2 775.38645355807 775.3859049679301 50.018 1 -0.10349113369574002 0.026005054892978437 0.9438714419765777 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 132700 16296 VYSEKVMHMF True PC9_epitope_Rep5 1269.58860114589 1269.58696490379 67.676 3 -0.10349881913156797 0.026005054892978437 0.9438714419765777 ['nc|ENSG00000196535|Q92614-3|MYO18A', 'nc|ENSG00000196535|Q92614-4|MYO18A', 'ENSG00000196535|ENST00000527372|MYO18A', 'nc|ENSG00000196535|Q92614-2|MYO18A'] 98674 10502 SIQIEFQQE True H1975_Epitope_Rep3 1120.540053647 1120.53894993586 45.46 2 -0.10350806712445272 0.026023772854717055 0.9438714419765777 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'JAKMIP1|p.T470Rfs*22|1|0.15|ENSG00000152969|chr4:6064903-6064903|T/-|frameshift_variant', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-5|JAKMIP1', 'nc|ENSG00000152969|Q96N16-3|JAKMIP1'] 26702 10405 FLDEKTHEL True PC9_epitope_Rep5 1130.56078909158 1130.55913490379 45.008 3 -0.10351164367884544 0.026023772854717055 0.9438714419765777 ['ENSG00000129317|ENST00000344862|PUS7L'] 36231 6716 GVGDVGAAAV True H1975_Epitope_Rep2 814.4184819623399 814.41793496793 30.745 1 -0.10358108456307498 0.02608249254644895 0.9438714419765777 ['ENST00000433005.1_1_7:17326135-17338978:-|nuORF'] 71585 20823 MLFPGSIAL True PC9_epitope_Rep6 947.51502519947 947.51392993586 92.868 2 -0.10361265505293646 0.026101721686937293 0.9438714419765777 ['ENSG00000101367|ENST00000375571|MAPRE1'] 140326 11243 YYEEQHPEL True PC9_epitope_Rep3 1206.5193182024198 1206.51822993586 48.254 2 -0.10365946846652797 0.026118887331451245 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 66434 3581 LSRNQTVVV True NCI_RA007_Epitope_Rep4 1014.5821932424999 1014.58108993586 19.808 2 -0.103660548420922 0.026118887331451245 0.9438714419765777 ['ENSG00000139946|ENST00000267460|PELI2'] 135672 6065 YEGPPDDEA True H1975_Epitope_Rep2 991.3770706428298 991.37596993586 28.306 2 -0.10369548061819717 0.026118887331451245 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 140335 9385 YYEEQHPEL True PC9_epitope_Rep6 1206.5193182024198 1206.51822993586 46.297 2 -0.10370160684353764 0.026118887331451245 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 54944 8061 LAHAAFSAA True PC9_epitope_Rep3 857.43955176009 857.43844993586 35.984 2 -0.10370631689461113 0.026118887331451245 0.9438714419765777 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1', 'MMGT1|p.E37Kfs*7|1|0.46|ENSG00000169446|chrX:135971082-135971082|T/-|frameshift_variant', 'ENSG00000169446|ENST00000305963|MMGT1'] 9090 14855 AVLDLVHSA True PC9_epitope_Rep4 923.50763131991 923.50652993586 65.078 2 -0.10377389437696324 0.02615527349533153 0.9438714419765777 ['ENST00000598755.1_1_19:52104581-52104959:+|nuORF', 'ENSG00000142544|ENST00000421832|CTU1'] 27647 6457 FQDDDQTRV True PC9_epitope_Rep3 1122.4941660837399 1122.4930699358601 29.862 2 -0.10379735859443333 0.02615527349533153 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 123490 14847 VIGPPVVL True H1975_Epitope_Rep1 792.5109257952 792.51037496793 62.34 1 -0.10380840474531643 0.02615527349533153 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 9658 16422 AYGNVFSAF True NCI_RA007_Epitope_Rep4 974.4497820906199 974.44868993586 71.175 2 -0.10382721172775046 0.02615527349533153 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 120458 16175 VFVDSVPEF True NCI_RA007_Epitope_Rep5 1037.5069626135698 1037.5058699358601 68.958 2 -0.10385337631588112 0.02615527349533153 0.9438714419765777 ['nc|ENSG00000104299|Q9NV88-3|INTS9', 'ENSG00000104299|ENST00000521022|INTS9', 'ENST00000520983.5_1_8:28651295-28747426:-|nuORF'] 36216 17687 GVGAVNISV True PC9_epitope_Rep1 814.45486747106 814.45376993586 72.827 2 -0.10388851963827495 0.02615527349533153 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 104565 5645 SSSISSFKDPK True PC9_epitope_Rep5 1181.59281749585 1181.59117490379 26.714 3 -0.10399309022138895 0.02617036393779111 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1'] 45342 7893 ISDECKRRFYK True NCI_RA007_Epitope_Rep1 1443.7292684823499 1443.72763490379 34.694 3 -0.10400765021927252 0.02617036393779111 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000484615.5_1_22:39713464-39715605:-|nuORF', 'ENST00000460589.5_1_22:39713464-39715412:-|nuORF', 'ENST00000465618.5_1_22:39712851-39715803:-|nuORF', 'ENST00000467870.1_1_14:57445264-57445663:+|nuORF'] 120995 5172 VGEVIVTK True H1975_Epitope_Rep3 843.50656869075 843.50546993586 24.994 2 -0.10400986935627365 0.02617036393779111 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000420325.1_1_13:38567761-38567950:-|nuORF', 'ENST00000388967.3_1_3:36809128-36809431:-|nuORF'] 6982 5834 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep3 935.4348606187698 935.43376993586 29.928 2 -0.1041081019749661 0.02617036393779111 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 67279 13963 LTDPAIVKV True PC9_epitope_Rep1 954.57498260374 954.57388993586 58.545 2 -0.10413300514888886 0.02617036393779111 0.9438714419765777 ['nc|ENSG00000171824|Q01780-2|EXOSC10', 'ENSG00000171824|ENST00000376936|EXOSC10'] 15080 8267 EAAVVAAAV True H1975_Epitope_Rep3 799.4439684341899 799.44341496793 36.784 1 -0.1041604019361429 0.02617036393779111 0.9438714419765777 ['ENSG00000154174|ENST00000284320|TOMM70'] 70858 5226 MEGKVPVAA True H1975_Epitope_Rep2 900.4738886634798 900.47278993586 25.169 2 -0.10416968431790376 0.02617036393779111 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 116768 15977 TYLEKFQNL True PC9_epitope_Rep6 1154.5971746002997 1154.5960699358602 73.758 2 -0.10419810491288796 0.02617036393779111 0.9438714419765777 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 107029 18039 SYLPFTEAF True NCI_RA007_Epitope_Rep3 1073.5069626135698 1073.50637496793 79.049 1 -0.10422120023779491 0.02617036393779111 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 85950 5026 QPATATAATAA True PC9_epitope_Rep5 972.4876241513199 972.48652993586 24.362 2 -0.10424529456462318 0.026189583374449862 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 118509 13542 VDSQILYY True H1975_Epitope_Rep2 999.49131254943 999.49020993586 57.226 2 -0.10428408326953147 0.026208284817745852 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 124530 14117 VLGAFSDG True PC9_epitope_Rep2 764.37046914076 764.36992496793 59.573 1 -0.10428427587346745 0.026208284817745852 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66N|1|0.32|ENSG00000223609|chr11:5234108-5234108|C/A|missense_variant'] 36809 21560 GVPQALFGV True PC9_epitope_Rep1 886.4912529797799 886.49070496793 87.752 1 -0.10429157167573457 0.02622750236817177 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 38958 4738 HITHSREREYK True NCI_RA007_Epitope_Rep2 1454.7378590201 1454.7362249037901 23.06 3 -0.10429668479531501 0.026246719160104987 0.9438714419765777 ['ENSG00000180257|ENST00000444460|ZNF816'] 48508 9705 KEFNFPEEA True NCI_RA007_Epitope_Rep4 1109.5029398622898 1109.50184993586 44.175 2 -0.10439667144863034 0.026259716687053625 0.9438714419765777 ['ENSG00000105063|ENST00000412770|PPP6R1', 'ENST00000589343.1_1_19:55750771-55751051:-|nuORF'] 81511 4298 PQRYKDKLP True H1975_Epitope_Rep2 1143.64004247179 1143.63838490379 21.644 3 -0.10440409308581221 0.026259716687053625 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'CEP192|p.S1464Ffs*9|1|0.11|ENSG00000101639|chr18:13059212-13059213|-/T|frameshift_variant', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF', 'CEP192|p.Q1109Efs*2|1|0.12|ENSG00000101639|chr18:13055915-13055916|CA/-|frameshift_variant'] 79770 11262 PHVLLATE True PC9_epitope_Rep3 878.4861675993401 878.48561496793 48.327 1 -0.10442034750781777 0.026259716687053625 0.9438714419765777 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|164|3|sense'] 37255 15015 GVVGEVTQV True PC9_epitope_Rep5 886.47599683846 886.47544496793 62.758 1 -0.10445262385435587 0.026259716687053625 0.9438714419765777 ['ENSG00000059378|ENST00000263549|PARP12'] 34956 17404 GQWYGPNTV True PC9_epitope_Rep1 1020.4664947839199 1020.46597496793 71.744 1 -0.10447037896093965 0.026259716687053625 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 88000 17976 QVSEVFNTV True PC9_epitope_Rep1 1021.5080252427299 1021.50692993586 73.937 2 -0.10447506181941518 0.026259716687053625 0.9438714419765777 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 28695 5330 FSTPEQAAK True PC9_epitope_Rep1 977.4818104948898 977.48070993586 25.342 2 -0.10448264833951962 0.026259716687053625 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781237-34781759:-|nuORF', 'ENST00000595443.5_1_19:39327988-39329682:-|nuORF'] 6468 7392 APTAITEA True PC9_epitope_Rep4 772.3966838886 772.39558993586 35.778 2 -0.10452179735393433 0.026259716687053625 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 5027 12006 ALLFCYGLK True H1975_Epitope_Rep1 1026.5572243646197 1026.55612993586 51.19 2 -0.10452447351179012 0.026259716687053625 0.9438714419765777 ['ENST00000463001.5_1_1:157765953-157771747:-|nuORF', 'FCRL1|p.N419Kfs*8|1|0.22|ENSG00000163534|chr1:157796132-157796133|-/T|frameshift_variant', 'nc|ENSG00000163534|Q96LA6-2|FCRL1', 'ENSG00000163534|ENST00000368176|FCRL1'] 119241 9731 VELAEAPVP True H1975_Epitope_Rep2 923.4963979298698 923.49530993586 42.416 2 -0.1045288190688556 0.026259716687053625 0.9438714419765777 ['PHETA2|p.R118Gfs*93|1|0.25|ENSG00000177096|chr22:42077643-42077643|C/-|frameshift_variant', 'ENSG00000177096|ENST00000321753|PHETA2'] 102057 8773 SPPPPPPPP True PC9_epitope_Rep3 881.4647038787699 881.46360993586 38.697 2 -0.10453820574158533 0.026259716687053625 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 20371 21837 EPIPYEFMA True PC9_epitope_Rep1 1095.49468367771 1095.49417496793 88.805 1 -0.1045458904443332 0.026259716687053625 0.9438714419765777 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 118859 4377 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 21.956 2 -0.10456721204800142 0.026259716687053625 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 85853 13026 QNETGIAAL True PC9_epitope_Rep1 915.4661604307498 915.46506993586 54.974 2 -0.10458521075381916 0.026277890666614057 0.9438714419765777 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 29865 18829 FVWSGTAEA True PC9_epitope_Rep5 966.4446967101799 966.44358993586 77.44 2 -0.10464632933946919 0.026277890666614057 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 85285 5483 QKSLSLSPG True NCI_RA007_Epitope_Rep5 915.5025459394699 915.50199496793 27.778 1 -0.1046537152702521 0.026277890666614057 0.9438714419765777 ['nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3'] 72507 12930 MVAPVTGNDV True PC9_epitope_Rep4 1001.48518162317 1001.48408993586 57.619 2 -0.10476688265274946 0.026316308614941507 0.9438714419765777 ['nc|ENSG00000137575|O00560-3|SDCBP', 'nc|ENSG00000137575|O00560-2|SDCBP', 'ENSG00000137575|ENST00000260130|SDCBP', 'ENST00000522843.5_1_8:59477592-59488665:+|nuORF', 'ENST00000519115.5_1_8:59477592-59490768:+|nuORF'] 112839 17875 TPMPPISSV True PC9_epitope_Rep3 927.47355431031 927.47244993586 73.953 2 -0.10479321223958196 0.026316308614941507 0.9438714419765777 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 40766 15925 HVDGFIANV True PC9_epitope_Rep1 970.4872302284999 970.48612993586 66.065 2 -0.10485599551518872 0.026374970409532076 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000473864.1_1_3:156528118-156528448:-|nuORF', 'ENST00000414718.1_1_20:12360810-12361446:+|nuORF'] 139531 18096 YTLDGGDIINA True PC9_epitope_Rep6 1150.5506183307 1150.5495299358602 82.242 2 -0.10495754542441478 0.02641286122891804 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1'] 115563 8483 TVIAKVNNV True PC9_epitope_Rep1 956.5654805492 956.56438993586 37.466 2 -0.10498826429928426 0.02641286122891804 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 71887 5948 MPNGTPHPTAA True PC9_epitope_Rep1 1092.50222866964 1092.50112993586 27.693 2 -0.10499566104618548 0.02641286122891804 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 33273 17507 GLAQPDSVSI True PC9_epitope_Rep4 985.50802524273 985.50692993586 75.345 2 -0.10500152553560248 0.02643050158780252 0.9438714419765777 ['ENSG00000108700|ENST00000394620|CCL8'] 84819 12905 QHLLDTNQL True PC9_epitope_Rep2 1080.5563724174801 1080.55526993586 54.936 2 -0.10501315972081124 0.02643050158780252 0.9438714419765777 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF', 'EHF|p.D69V|2|0.38|ENSG00000135373|chr11:34646547-34646547|A/T|missense_variant'] 70036 20053 LYGQVQVF True PC9_epitope_Rep2 952.5018176634799 952.50072993586 82.54 2 -0.10504974799525531 0.02643050158780252 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'ENSG00000162408|ENST00000377705|NOL9'] 95522 8462 SAQGNHIPL True PC9_epitope_Rep5 935.4824792012299 935.48138993586 37.493 2 -0.10507176391079032 0.02643050158780252 0.9438714419765777 ['ENST00000337198.9_1_8:103876093-103876378:-|nuORF'] 112075 13847 TLTLEQKL True PC9_epitope_Rep6 944.5542471591599 944.55314993586 65.076 2 -0.10518356097140433 0.02644918246188438 0.9438714419765777 ['nc|ENSG00000145868|Q6PIJ6-3|FBXO38', 'nc|ENSG00000145868|Q6PIJ6-2|FBXO38', 'ENSG00000145868|ENST00000340253|FBXO38'] 9241 6648 AVQMYENCLRK True H1975_Epitope_Rep1 1353.65332666077 1353.65167490379 30.626 3 -0.10523120870443428 0.02644918246188438 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 38110 8895 HEPEPHIL True PC9_epitope_Rep3 970.4872302285 970.48612993586 39.166 2 -0.10530699723649707 0.026468383890181846 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 125883 17057 VNSNENIIF True H1975_Epitope_Rep1 1048.5189242796 1048.5178299358602 71.034 2 -0.10532389642002278 0.026479228691417417 0.9438714419765777 ['nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 130587 5542 VVAAHLAGA True PC9_epitope_Rep4 807.46028720467 807.45918993586 28.081 2 -0.1053272243671406 0.026479228691417417 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 74612 7570 NLDSQRLQY True H1975_Epitope_Rep2 1135.56218607391 1135.56108993586 34.07 2 -0.10537049621420928 0.026479228691417417 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-7|UEVLD'] 43174 4993 IGSGC[Carbamidomethyl]NLDSAR True NCI_RA007_Epitope_Rep2 1148.5244209456298 1148.5233299358601 24.046 2 -0.10538799870040137 0.026479228691417417 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000398295.3_1_2:85004811-85005102:-|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 67313 4810 LTDPRGAQAHY True H1975_Epitope_Rep3 1227.5996342117899 1227.5979749037901 23.629 3 -0.10538996021412887 0.026479228691417417 0.9438714419765777 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-4|SPIRE2'] 140430 18914 YYFEGIKQTF True PC9_epitope_Rep4 1294.6233893481397 1294.6217549037901 80.84 3 -0.10540195709294957 0.026479228691417417 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 101758 7182 SPHPGLVAA True PC9_epitope_Rep5 847.4552018242299 847.45410993586 32.591 2 -0.10540201972145123 0.026479228691417417 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300'] 31649 6884 GEHIATEITA True H1975_Epitope_Rep3 1040.51383889916 1040.51274993586 31.438 2 -0.1054134793210973 0.026479228691417417 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 109558 4747 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 25.691 2 -0.10542107110811057 0.026479228691417417 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 88776 6147 RDLELQAA True NCI_RA007_Epitope_Rep3 914.48214484806 914.48104993586 31.173 2 -0.10542822373964232 0.026479228691417417 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000590856.1_1_17:73826107-73826739:-|nuORF'] 23768 14210 EYIRSLNQF True PC9_epitope_Rep6 1168.58767254576 1168.58656993586 66.545 2 -0.10545352788116588 0.026479228691417417 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 16895 3957 EGALC[Carbamidomethyl]EENM[Oxidation]R True NCI_RA007_Epitope_Rep2 1223.49107259246 1223.48996993586 20.029 2 -0.10546376553181382 0.026479228691417417 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 35374 16501 GTASGFYTV True PC9_epitope_Rep3 901.4181476091701 901.41704993586 68.608 2 -0.1054664975820184 0.026479228691417417 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 24585 23631 FALSGPLFL True PC9_epitope_Rep5 963.5429541994699 963.54184993586 95.875 2 -0.10550503260909476 0.026479228691417417 0.9438714419765777 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 91508 7421 RPAAGFVA True PC9_epitope_Rep1 787.4340724568299 787.43296993586 33.361 2 -0.10551586126703894 0.026479228691417417 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 58771 17046 LFMSLHFLILY True H1975_Epitope_Rep3 1395.76246610359 1395.76136993586 71.168 2 -0.10553011250851947 0.026479228691417417 0.9438714419765777 ['ATP2A1|p.S940F|1|0.26|ENSG00000196296|chr16:28903104-28903104|C/T|missense_variant'] 69004 9211 LVGTNDADL True NCI_RA007_Epitope_Rep3 916.4501760134399 916.44906993586 43.327 2 -0.10555885535662254 0.026479228691417417 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'MPDZ|p.S1510Efs*25|1|0.23|ENSG00000107186|chr9:13126713-13126714|-/A|frameshift_variant', 'ENST00000539508.5_1_9:13136054-13190160:-|nuORF'] 73752 9244 NHANVVRLL True PC9_epitope_Rep4 1034.5985120129799 1034.59740993586 43.154 2 -0.10558846627733084 0.0265352390340069 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF', 'ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 494 6637 AAPAEEPAAAA True PC9_epitope_Rep5 967.4610750503098 967.45996993586 30.503 2 -0.10559501794508601 0.0265352390340069 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 8531 20631 ATWLALNV True PC9_epitope_Rep3 886.4912529797799 886.49070496793 84.628 1 -0.10564261218824252 0.0265352390340069 0.9438714419765777 ['ENST00000538588.2_1_7:99821243-99844125:-|nuORF', 'nc|ENSG00000291122|Q8NAP1|CASTOR3P', 'ENSG00000274070|ENST00000616305|CASTOR2'] 6204 14919 APRAALVFA True PC9_epitope_Rep3 914.5337864980999 914.53268993586 62.521 2 -0.1056689045559331 0.0265352390340069 0.9438714419765777 ['ENSG00000170006|ENST00000304385|TMEM154'] 109545 5209 THAPATLEA True PC9_epitope_Rep2 909.45559574705 909.45448993586 25.425 2 -0.10577471529678056 0.0265352390340069 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 6984 5823 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep4 935.4348606187698 935.43376993586 29.023 2 -0.10578841296717771 0.0265352390340069 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 99813 18962 SLGSVDLALE True PC9_epitope_Rep3 1002.5233409536999 1002.52224993586 78.162 2 -0.10585405223408065 0.02655285931124209 0.9438714419765777 ['ENST00000560590.5_1_15:77864683-77865123:+|nuORF', 'ENST00000561123.2_1_15:77864683-77901013:+|nuORF'] 55782 18518 LDEHGIAAAL True PC9_epitope_Rep3 1008.5240096600398 1008.52290993586 76.448 2 -0.10588162254642973 0.02655285931124209 0.9438714419765777 ['nc|ENSG00000100241|O95248|SBF1', 'ENSG00000100241|ENST00000380817|SBF1', 'nc|ENSG00000100241|O95248-4|SBF1'] 86003 19886 QPILLELEA True PC9_epitope_Rep6 1024.580461907 1024.57936993586 89.146 2 -0.10594587789615457 0.02655285931124209 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'PPP1CA|p.L59I|1|0.13|ENSG00000172531|chr11:67401080-67401080|G/T|missense_variant', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 67312 4705 LTDPRGAQAHY True H1975_Epitope_Rep3 1227.5996342117899 1227.5979749037901 23.223 3 -0.1059585530807315 0.02655285931124209 0.9438714419765777 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-4|SPIRE2'] 131884 9784 VYDTVFKHF True NCI_RA007_Epitope_Rep3 1154.5760452328998 1154.5744049037899 45.549 3 -0.1061078977916511 0.026568382048603584 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 140745 18011 YYQNYFEKL True PC9_epitope_Rep4 1266.5920892198599 1266.59098993586 77.337 2 -0.10613613449752517 0.026568382048603584 0.9438714419765777 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'nc|ENSG00000166889|Q86TB9-2|PATL1'] 112912 11908 TPQPPLLKA True PC9_epitope_Rep1 963.5753169569099 963.57420993586 50.67 2 -0.10615824922442609 0.026568382048603584 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 2112 8633 AELQQRLL True NCI_RA007_Epitope_Rep4 969.5607295219299 969.55962993586 39.99 2 -0.1061748477382921 0.026568382048603584 0.9438714419765777 ['ENSG00000174145|ENST00000309447|NWD2'] 81994 6634 PSSPPGFHTG True PC9_epitope_Rep4 982.4508447197801 982.44974993586 32.681 2 -0.10620891064687667 0.026568382048603584 0.9438714419765777 ['ENST00000046640.7_1_17:3540070-3540534:+|nuORF', 'ENST00000381870.7_1_17:3539773-3540534:+|nuORF'] 48223 7266 KCVSSRIKQF True NCI_RA007_Epitope_Rep4 1194.65431263694 1194.65266490379 34.584 3 -0.1062091715414902 0.026568382048603584 0.9438714419765777 ['ENSG00000268964|ENST00000601417|ERVV-2'] 77168 7390 NYGDQVQHF True NCI_RA007_Epitope_Rep3 1106.47812209678 1106.4770299358602 36.195 2 -0.10622024558311662 0.026568382048603584 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 105783 21839 SVIEQLFFV True PC9_epitope_Rep6 1080.58554728744 1080.5844499358602 96.906 2 -0.10623666573043423 0.026568382048603584 0.9438714419765777 ['ENST00000506162.1_1_5:92927828-92929545:+|nuORF', 'nc|ENSG00000185551|P24468-3|NR2F2', 'nc|ENSG00000185551|P24468-2|NR2F2', 'ENSG00000185551|ENST00000394166|NR2F2', 'ENSG00000175745|ENST00000327111|NR2F1'] 116483 7549 TYDKGYQF True NCI_RA007_Epitope_Rep3 1020.45526139388 1020.45416993586 36.816 2 -0.10632845817853759 0.026587567503646183 0.9438714419765777 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5', 'nc|ENSG00000139197|P50542-2|PEX5'] 70029 19753 LYGNIIDNL True PC9_epitope_Rep6 1033.54441075145 1033.5433099358602 88.64 2 -0.1064349759656596 0.02660675220244782 0.9438714419765777 ['nc|ENSG00000101365|O43837-3|IDH3B', 'nc|ENSG00000101365|O43837-2|IDH3B', 'ENSG00000101365|ENST00000380843|IDH3B', 'ENST00000492240.5_1_20:2640597-2640995:-|nuORF'] 118650 9313 VEAPPVVTA True H1975_Epitope_Rep2 881.4858332461699 881.48528496793 40.783 1 -0.10646072423964177 0.026625936145053212 0.9438714419765777 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2'] 6913 20587 AQLDPEALGNI True PC9_epitope_Rep3 1139.58225281215 1139.5811499358601 84.454 2 -0.10651769497032272 0.02667875157629256 0.9438714419765777 ['ENSG00000134690|ENST00000373055|CDCA8'] 14564 13402 DVERATLTL True PC9_epitope_Rep2 1016.5502244078799 1016.54912993586 56.831 2 -0.10652894192081469 0.02667875157629256 0.9438714419765777 ['nc|ENSG00000105137|Q6ZW31-2|SYDE1', 'ENSG00000105137|ENST00000342784|SYDE1'] 322 11637 AAIENLNEA True PC9_epitope_Rep5 943.46107505031 943.46052496793 49.756 1 -0.1065653445208246 0.02667875157629256 0.9438714419765777 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 116930 21109 TYPEGLEVLHF True PC9_epitope_Rep2 1303.64485306871 1303.6437499358601 86.654 2 -0.10659019339483744 0.02667875157629256 0.9438714419765777 ['ENSG00000151849|ENST00000381884|CENPJ'] 81952 22515 PSPYTLILF True PC9_epitope_Rep1 1049.57973363101 1049.5786299358601 91.406 2 -0.10659382389399683 0.02667875157629256 0.9438714419765777 ['ENST00000367607.7_2_1:180082752-180082971:+|nuORF'] 104205 5862 SSDKGRLCYY True H1975_Epitope_Rep2 1190.53900810118 1190.53735490379 27.534 3 -0.10661668177018986 0.02667875157629256 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 4753 5942 ALEEAMEQK True PC9_epitope_Rep2 1047.4906609264297 1047.4895699358601 28.245 2 -0.10667929985457018 0.02667875157629256 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 52527 4303 KPPPPPPPP True PC9_epitope_Rep4 922.5276384884999 922.52654993586 22.964 2 -0.10669011139918326 0.02667875157629256 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 53876 17329 KYIDFDHVF True PC9_epitope_Rep6 1182.57095985246 1182.5698699358602 79.269 2 -0.106702707358902 0.02667875157629256 0.9438714419765777 ['ENSG00000007545|ENST00000397412|CRAMP1'] 82433 17171 PVCPPGGIQEV True PC9_epitope_Rep3 1094.5430308524599 1094.54192993586 71.205 2 -0.10670931939729168 0.02667875157629256 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'CON__Q922U2'] 123761 8498 VISFAQKVTN True H1975_Epitope_Rep3 1105.6131590176099 1105.61206993586 37.673 2 -0.10671780338020187 0.02667875157629256 0.9438714419765777 ['nc|ENSG00000106327|Q9UP52-2|TFR2', 'ENST00000476304.5_1_7:100218482-100231271:-|nuORF', 'nc|ENSG00000106327|Q9UP52-3|TFR2', 'ENSG00000106327|ENST00000223051|TFR2'] 55521 21880 LAWGFSTVL True PC9_epitope_Rep3 992.5331177917599 992.53202993586 89.464 2 -0.10673842523853314 0.02667875157629256 0.9438714419765777 ['ENSG00000160991|ENST00000495936|ORAI2'] 18007 11923 EIHSIGSIIAV True H1975_Epitope_Rep3 1137.63937376545 1137.63826993586 51.014 2 -0.10684863372190606 0.026697929186452033 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 111154 16134 TLESEEWNP True PC9_epitope_Rep2 1103.4771190372699 1103.4760299358602 67.317 2 -0.10692026733033813 0.026716579647325385 0.9438714419765777 ['ENST00000536219.5_1_12:64173626-64178865:+|nuORF', 'ENSG00000118600|ENST00000261234|RXYLT1'] 1406 14135 AEEFPNLAVA True H1975_Epitope_Rep3 1059.5236753068698 1059.52317496793 59.701 1 -0.10692597029271128 0.026716579647325385 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 5686 2540 APAPKPEAA True PC9_epitope_Rep6 850.4548674710599 850.45376993586 14.699 2 -0.10696096832281621 0.026734701918909334 0.9438714419765777 ['ENSG00000205903|ENST00000382252|ZNF316'] 132463 10075 VYNSWKNNKF True PC9_epitope_Rep5 1298.64077074778 1298.6391149037902 43.734 3 -0.10696878842273158 0.026734701918909334 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8'] 107810 7315 TAPPRHPRPRR True NCI_RA007_Epitope_Rep5 1339.7697682850699 1339.76812490379 34.813 3 -0.10700665985346959 0.026734701918909334 0.9438714419765777 ['nc|nan|Q9H7T3|C10orf95'] 84252 13627 QEVQELPIP True NCI_RA007_Epitope_Rep4 1051.5549754351498 1051.5538699358601 59.637 2 -0.10712560375639922 0.026750187133120593 0.9438714419765777 ['nc|ENSG00000109046|Q9Y6I7-2|WSB1', 'ENSG00000109046|ENST00000262394|WSB1', 'nc|ENSG00000109046|Q9Y6I7-4|WSB1', 'ENST00000467843.6_1_17:25636020-25639392:+|nuORF'] 20230 21760 ENVLAIISL True PC9_epitope_Rep1 970.5698972233 970.5693449679301 88.533 1 -0.10713197803357626 0.026750187133120593 0.9438714419765777 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000582313.5_1_18:245829-268019:-|nuORF', 'nc|ENSG00000079134|Q96FV9-2|THOC1'] 124532 13466 VLGAFSDG True PC9_epitope_Rep4 764.37046914076 764.36992496793 59.694 1 -0.10717461015045864 0.026750187133120593 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66N|1|0.32|ENSG00000223609|chr11:5234108-5234108|C/A|missense_variant'] 10943 6041 DAWEDLRRYKS True NCI_RA007_Epitope_Rep5 1437.7000765290497 1437.69844490379 29.918 3 -0.107193067156887 0.026750187133120593 0.9438714419765777 ['nc|ENSG00000118322|O94823-3|ATP10B'] 136806 20453 YITDLFQVL True NCI_RA007_Epitope_Rep3 1110.59611197114 1110.5950099358602 89.111 2 -0.10720433898413113 0.026750187133120593 0.9438714419765777 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'ENST00000313754.4_1_3:94225612-94226386:-|nuORF', 'nc|ENSG00000170632|Q8N2F6-5|ARMC10'] 78797 15032 PELQIYQL True NCI_RA007_Epitope_Rep4 1002.5385970950199 1002.53750993586 65.335 2 -0.10721284439311937 0.026750187133120593 0.9438714419765777 ['ENST00000585421.5_1_17:76850481-76850583:-|nuORF'] 110748 19893 TKIDSWNCK True PC9_epitope_Rep5 1093.52262976105 1093.5215299358601 81.57 2 -0.10722831337021045 0.026750187133120593 0.9438714419765777 ['ENST00000255390.9_1_17:10584188-10584290:-|nuORF'] 83428 11957 QCQDTMLLV True NCI_RA007_Epitope_Rep4 1049.48855275145 1049.48744993586 52.994 2 -0.10724617204945429 0.026750187133120593 0.9438714419765777 ['PRUNE2|p.P1965L|1|0.47|ENSG00000106772|chr9:76706380-76706380|G/A|missense_variant'] 84680 11229 QHFDSVM[Oxidation]QL True PC9_epitope_Rep2 1119.5018946969099 1119.5007899358602 48.52 2 -0.107268003719312 0.026759343126058363 0.9438714419765777 ['ENST00000497054.5_1_2:74386211-74405801:-|nuORF', 'ENSG00000114978|ENST00000396049|MOB1A'] 75890 8706 NRDQYSHLL True PC9_epitope_Rep2 1144.56252042708 1144.5614299358601 38.85 2 -0.10727751957578814 0.026759343126058363 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 38577 8847 HHGGPLTL True PC9_epitope_Rep3 830.4398861132601 830.43878993586 38.982 2 -0.1073248858745631 0.026759343126058363 0.9438714419765777 ['ENST00000322310.9_1_9:140084508-140084799:+|nuORF'] 102220 12686 SPSPPSVAV True PC9_epitope_Rep5 839.4388830537499 839.43833496793 53.802 1 -0.10732898842968791 0.026759343126058363 0.9438714419765777 ['nc|ENSG00000143207|Q8NHY2-5|COP1', 'COP1|p.T329Qfs*25|1|0.31|ENSG00000143207|chr1:176116666-176116666|G/-|frameshift_variant', 'nc|ENSG00000143207|Q8NHY2-2|COP1', 'nc|ENSG00000143207|Q8NHY2-4|COP1', 'ENSG00000143207|ENST00000367669|COP1'] 14393 12543 DTFLDSLQ True H1975_Epitope_Rep2 937.43927697657 937.43872496793 53.342 1 -0.10733366915114426 0.026759343126058363 0.9438714419765777 ['nc|ENSG00000169372|P78560-2|CRADD', 'ENST00000549615.5_1_12:94071236-94184481:+|nuORF', 'ENSG00000169372|ENST00000332896|CRADD'] 31520 11083 GEFEHVFEA True H1975_Epitope_Rep2 1063.4610750503098 1063.45996993586 47.664 2 -0.10733890791246667 0.026759343126058363 0.9438714419765777 ['ENSG00000178814|ENST00000618853|OPLAH'] 38441 4577 HGVLGPER True NCI_RA007_Epitope_Rep4 863.46134983383 863.46024993586 24.01 2 -0.10735358323490121 0.026759343126058363 0.9438714419765777 ['nc|ENSG00000198026|Q9H4Z2-2|ZNF335', 'ENSG00000198026|ENST00000322927|ZNF335'] 131594 6918 VVWQRRHAR True NCI_RA007_Epitope_Rep4 1206.68464167878 1206.6829949037901 33.229 3 -0.10736050013603357 0.026759343126058363 0.9438714419765777 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 115384 5311 TVEPRRRKFHR True NCI_RA007_Epitope_Rep3 1480.8487468817598 1480.84711490379 27.901 3 -0.10739233981702655 0.026759343126058363 0.9438714419765777 ['nc|ENSG00000029534|P16157-14|ANK1', 'nc|ENSG00000029534|P16157-10|ANK1', 'nc|ENSG00000029534|P16157-8|ANK1', 'IKBKB-ANK1|13|fusion', 'IKBKB-ANK1|12|fusion', 'nc|ENSG00000029534|P16157-5|ANK1', 'nc|ENSG00000029534|P16157-16|ANK1', 'IKBKB-ANK1|11|fusion', 'IKBKB-ANK1|14|fusion', 'ENSG00000029534|ENST00000289734|ANK1', 'nc|ENSG00000029534|P16157|ANK1', 'IKBKB-ANK1|3|fusion', 'IKBKB-ANK1|2|fusion', 'nc|ENSG00000029534|P16157-21|ANK1', 'nc|ENSG00000029534|P16157-12|ANK1', 'IKBKB-ANK1|1|fusion', 'IKBKB-ANK1|4|fusion', 'nc|ENSG00000029534|P16157-15|ANK1', 'IKBKB-ANK1|5|fusion', 'nc|ENSG00000029534|P16157-2|ANK1', 'ENST00000524227.5_1_8:41525962-41555361:-|nuORF', 'nc|ENSG00000029534|P16157-4|ANK1', 'nc|ENSG00000029534|P16157-7|ANK1', 'IKBKB-ANK1|15|fusion', 'nc|ENSG00000029534|P16157-6|ANK1', 'nc|ENSG00000029534|P16157-9|ANK1', 'nc|ENSG00000029534|P16157-11|ANK1', 'ANK1|p.G1477Wfs*67|1|0.37|ENSG00000029534|chr8:41684652-41684653|-/A|frameshift_variant', 'nc|ENSG00000029534|P16157-13|ANK1', 'IKBKB-ANK1|9|fusion', 'IKBKB-ANK1|6|fusion', 'ANK1|p.N1300Tfs*5|1|0.26|ENSG00000029534|chr8:41690561-41690561|C/-|frameshift_variant', 'IKBKB-ANK1|7|fusion', 'IKBKB-ANK1|8|fusion', 'IKBKB-ANK1|10|fusion'] 39213 5715 HLHHGKVRRNF True PC9_epitope_Rep2 1399.7697682850696 1399.76812490379 27.373 3 -0.10739474320841813 0.026759343126058363 0.9438714419765777 ['ENST00000589825.5_1_17:42960950-42971889:-|nuORF'] 85945 13527 QPAPVIPSA True PC9_epitope_Rep5 878.48616759934 878.48506993586 57.053 2 -0.10740139735272494 0.026759343126058363 0.9438714419765777 ['ENSG00000151694|ENST00000310823|ADAM17'] 98510 9627 SILFYRCRK True PC9_epitope_Rep1 1184.64883333368 1184.64718490379 41.885 3 -0.10743154327422744 0.026759343126058363 0.9438714419765777 ['NEIL3|p.R295Kfs*4|1|0.36|ENSG00000109674|chr4:177351392-177351394|TAG/AA|frameshift_variant', 'ENSG00000109674|ENST00000264596|NEIL3', 'chr4:177339857-177341476|495|14.28|0.67|4.42|+|0|NEIL3,NEIL3|1'] 68644 18146 LVAPPLPAA True PC9_epitope_Rep4 847.51673945163 847.51564993586 77.864 2 -0.1074857727588864 0.026759343126058363 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 127211 22378 VQIDGLVVL True PC9_epitope_Rep2 954.5749826037398 954.5744349679301 91.571 1 -0.10752478140071185 0.026759343126058363 0.9438714419765777 ['ENSG00000147677|ENST00000521861|EIF3H', 'ENST00000518034.5_1_8:117671049-117768048:-|nuORF', 'EIF3H|p.K48E|1|0.13|ENSG00000147677|chr8:116726163-116726163|T/C|missense_variant', 'EIF3H|p.E217Nfs*30|1|0.19|ENSG00000147677|chr8:116655914-116655914|C/-|frameshift_variant'] 82435 17359 PVCPPGGIQEV True PC9_epitope_Rep3 1094.5430308524599 1094.54192993586 71.944 2 -0.1075465979391199 0.026759343126058363 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'CON__Q922U2'] 101021 21232 SLTGVPILVV True PC9_epitope_Rep1 996.6219327961599 996.62082993586 86.493 2 -0.10755483487887098 0.026759343126058363 0.9438714419765777 ['ENSG00000250510|ENST00000311268|GPR162'] 106386 17220 SVSTQLSLV True PC9_epitope_Rep6 932.51786165044 932.51676993586 78.827 2 -0.10757593605023437 0.026759343126058363 0.9438714419765777 ['ENSG00000214194|ENST00000397764|SMIM30'] 14416 14051 DTIDIVRDAV True H1975_Epitope_Rep1 1115.58225281215 1115.5811499358601 59.211 2 -0.10757621990481891 0.026759343126058363 0.9438714419765777 ['ENSG00000110697|ENST00000356404|PITPNM1', 'nc|ENSG00000110697|O00562-2|PITPNM1'] 40852 9740 HVLGPDLKSV True PC9_epitope_Rep4 1063.60259433391 1063.6014899358602 45.102 2 -0.1075918420155801 0.026759343126058363 0.9438714419765777 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 101624 16870 SPFGSITSA True PC9_epitope_Rep5 865.4181476091701 865.41704993586 69.901 2 -0.10762784322432305 0.026759343126058363 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 95695 8719 SAYDGKDYIA True PC9_epitope_Rep6 1101.49785448185 1101.4967499358602 43.397 2 -0.10766946078267653 0.02677797905016933 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 87535 18390 QTIALITYL True H1975_Epitope_Rep3 1034.60119735158 1034.60010993586 77.092 2 -0.1076825549150351 0.02677797905016933 0.9438714419765777 ['nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'SMARCA2|p.M767I|2|0.59|ENSG00000080503|chr9:2081948-2081948|G/A|missense_variant', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant'] 81527 19607 PQVINQAVGL True PC9_epitope_Rep1 1037.58694426977 1037.58637496793 80.246 1 -0.10774293030855801 0.02679714111323318 0.9438714419765777 ['nc|ENSG00000153266|Q8TBJ5-2|FEZF2', 'ENSG00000153266|ENST00000283268|FEZF2'] 38727 10352 HHSVGTELL True PC9_epitope_Rep3 991.50869394907 991.50758993586 44.762 2 -0.10778214040788572 0.026816302421736563 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 136634 7739 YIDHGDPQV True PC9_epitope_Rep5 1042.4719740871801 1042.47086993586 34.709 2 -0.10787138402079267 0.026835462975724044 0.9438714419765777 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3131970-3189635:+|nuORF'] 100040 16500 SLKLEDVAL True PC9_epitope_Rep4 986.5648118428599 986.56370993586 71.438 2 -0.10793866461745442 0.026853565381738 0.9438714419765777 ['PDZD8|p.K1070Nfs*8|1|0.1|ENSG00000165650|chr10:117283523-117283523|T/-|frameshift_variant', 'ENSG00000165650|ENST00000334464|PDZD8'] 126934 7951 VPVHDIYVSQ True NCI_RA007_Epitope_Rep5 1155.59242357303 1155.5913299358601 37.273 2 -0.10795328369194174 0.026853565381738 0.9438714419765777 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 35510 8410 GTGIVSAPVPK True PC9_epitope_Rep6 1024.59169529704 1024.5905899358602 42.03 2 -0.10795891281673521 0.026853565381738 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 36288 19533 GVGPVNISV True PC9_epitope_Rep1 840.4705175352 840.4699649679301 79.956 1 -0.10801746315590863 0.02687219466099693 0.9438714419765777 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q922U2'] 36817 20565 GVPQALFGV True PC9_epitope_Rep4 886.4912529797799 886.49070496793 87.254 1 -0.10803362629993979 0.02687219466099693 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 53925 9571 KYINTDAKF True PC9_epitope_Rep3 1098.5709598524597 1098.5698699358602 41.766 2 -0.10807530284514832 0.02689135185148729 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 77327 12582 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.60641490379 56.226 3 -0.10811715402094843 0.026910508287727862 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 129817 11259 VTLELREN True PC9_epitope_Rep5 972.52400966004 972.52290993586 48.298 2 -0.10818155407154964 0.026927013620974726 0.9438714419765777 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 23799 9369 EYLDRAEKL True PC9_epitope_Rep2 1135.5873381925899 1135.58569490379 41.372 3 -0.10820669246554263 0.026927013620974726 0.9438714419765777 ['ENST00000591475.5_1_18:61064221-61089576:-|nuORF', 'ENSG00000119541|ENST00000238497|VPS4B'] 95124 7311 RYVPRASYF True NCI_RA007_Epitope_Rep5 1157.5981776598098 1157.59654490379 34.798 3 -0.108248065565098 0.026927013620974726 0.9438714419765777 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'ENST00000510058.1_1_6:41904922-41909441:-|nuORF'] 117737 21231 VALGALVTV True PC9_epitope_Rep2 841.52730413533 841.52620993586 87.124 2 -0.10825971442924753 0.026927013620974726 0.9438714419765777 ['ENSG00000129473|ENST00000250405|BCL2L2'] 9600 11716 AYEHKFYEI True PC9_epitope_Rep2 1198.5658744720197 1198.56421490379 50.397 3 -0.10827168781436913 0.026927013620974726 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 2714 11493 AETLSSWEA True H1975_Epitope_Rep2 992.445090633 992.44398993586 49.263 2 -0.10828656880965101 0.026927013620974726 0.9438714419765777 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 92966 9787 RRQEAIYEM True PC9_epitope_Rep3 1194.5815416194998 1194.5798849037901 42.599 3 -0.10832549640966793 0.02694510598933218 0.9438714419765777 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000465087.1_1_10:5494419-5494892:+|nuORF'] 125031 24203 VLPDMFFSF True PC9_epitope_Rep5 1101.5205045027299 1101.51940993586 98.094 2 -0.10835782073777257 0.02694510598933218 0.9438714419765777 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 113230 17558 TQDTQLITV True PC9_epitope_Rep5 1017.5342399905699 1017.53314993586 72.545 2 -0.10840847915615022 0.02694510598933218 0.9438714419765777 ['ENSG00000164258|ENST00000296684|NDUFS4'] 5955 21248 APIRGFWIV True PC9_epitope_Rep5 1057.6072857915299 1057.6061899358601 86.781 2 -0.10855061205204478 0.02698287738634127 0.9438714419765777 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88', 'ENST00000570937.1_1_17:5294807-5298221:-|nuORF', 'ENST00000576862.5_1_17:5290923-5298221:-|nuORF'] 63479 8374 LPHGFTNM[Oxidation]A True PC9_epitope_Rep2 1002.4593016089401 1002.4582099358599 37.584 2 -0.10860212102360575 0.02698287738634127 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 40367 3826 HRTELETKL True PC9_epitope_Rep4 1125.61422164677 1125.61258490379 20.887 3 -0.1086200767027012 0.02698287738634127 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 136746 17532 YIPGRQIIEV True PC9_epitope_Rep1 1186.6710082468999 1186.66990993586 72.23 2 -0.10868027019592168 0.02701479615929482 0.9438714419765777 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 106817 13904 SYGTVSQIF True NCI_RA007_Epitope_Rep4 1000.4865615221598 1000.48597496793 60.757 1 -0.10868952141198238 0.02701479615929482 0.9438714419765777 ['nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 54493 14608 LAAATATFAAA True PC9_epitope_Rep4 977.5181960036099 977.51708993586 64.119 2 -0.1086919246627319 0.02701479615929482 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 78073 15474 PALRGALL True PC9_epitope_Rep5 809.5123227775299 809.51122993586 64.531 2 -0.10873299869303746 0.02701479615929482 0.9438714419765777 ['ENST00000262738.7_1_22:46932303-46932903:-|nuORF'] 11256 5734 DERANLTTL True NCI_RA007_Epitope_Rep3 1031.5247379360299 1031.52364993586 29.533 2 -0.10874131948845155 0.02701479615929482 0.9438714419765777 ['ENSG00000015413|ENST00000690203|DPEP1', 'ENST00000565249.5_1_16:89680092-89703400:+|nuORF', 'ENST00000564281.5_1_16:89680092-89704100:+|nuORF'] 127540 14365 VQVPHHLLSSV True PC9_epitope_Rep3 1214.6771562565002 1214.67550490379 60.347 3 -0.10875572956452696 0.02701479615929482 0.9438714419765777 ['ENST00000441339.2_11:69061685-69061946:+|nuORF'] 42011 7842 IEDSEPHIP True H1975_Epitope_Rep1 1035.48728979815 1035.48618993586 35.114 2 -0.10877049443317756 0.02701479615929482 0.9438714419765777 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'ENST00000359142.7_1_12:89984763-89992387:-|nuORF'] 102723 16788 SQDTSFTTL True PC9_epitope_Rep5 998.4556553167 998.4551049679301 69.581 1 -0.1087824277679008 0.02701479615929482 0.9438714419765777 ['nc|ENSG00000198380|Q06210-2|GFPT1', 'ENSG00000198380|ENST00000357308|GFPT1'] 84074 12686 QEQDSRLWSP True H1975_Epitope_Rep3 1244.5785644140399 1244.57746993586 54.007 2 -0.10878708608738846 0.02701479615929482 0.9438714419765777 ['ENST00000557612.5_1_14:70795945-70826359:-|nuORF', 'ENST00000389912.6_1_14:70809414-70826359:-|nuORF'] 103241 16899 SQSSLIHLV True PC9_epitope_Rep3 982.5447451046201 982.54364993586 70.159 2 -0.10879969594141412 0.02701479615929482 0.9438714419765777 ['nc|ENSG00000097021|O00154-2|ACOT7', 'nc|ENSG00000097021|O00154-3|ACOT7', 'nc|ENSG00000097021|O00154-6|ACOT7', 'nc|ENSG00000097021|O00154-4|ACOT7', 'nc|ENSG00000097021|O00154-5|ACOT7', 'ACOT7|p.R364Gfs*5|1|0.24|ENSG00000097021|chr1:6264651-6264651|C/-|frameshift_variant', 'ENSG00000097021|ENST00000361521|ACOT7', 'nc|ENSG00000097021|O00154|ACOT7'] 105329 8718 [Acetylation]-STVHEILC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep5 1127.56449516876 1127.5633899358602 40.198 2 -0.10885134590606137 0.02701479615929482 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 82991 16782 PYFNAPVYL True NCI_RA007_Epitope_Rep4 1082.5436824754597 1082.5425899358602 72.736 2 -0.1088666382672911 0.02701479615929482 0.9438714419765777 ['nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1'] 41107 15408 HYMPPPYASL True PC9_epitope_Rep4 1174.5481162328997 1174.5470099358602 67.198 2 -0.1089017101918236 0.02701479615929482 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 75893 8311 NRDQYSHLL True PC9_epitope_Rep4 1144.56252042708 1144.5614299358601 39.425 2 -0.108913380883016 0.02701479615929482 0.9438714419765777 ['nc|ENSG00000066651|Q7Z4G4-2|TRMT11', 'ENSG00000066651|ENST00000334379|TRMT11'] 139343 2765 YTDSSYEEKKY True H1975_Epitope_Rep3 1411.61434078607 1411.61269490379 14.72 3 -0.1089353037323074 0.02703393999016232 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 9499 6822 AWAPKPYHKF True PC9_epitope_Rep6 1243.6502132326698 1243.64857490379 35.102 3 -0.10900390680841184 0.027053083067721244 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000459881.1_1_3:170784284-170789158:-|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4'] 76248 16968 NSDLNNLLF True H1975_Epitope_Rep1 1048.5189242796 1048.5178299358602 70.69 2 -0.10918416663093215 0.0270908339727321 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 108410 13388 TEEDPSLPAL True H1975_Epitope_Rep2 1070.5131701928199 1070.51257496793 56.631 1 -0.10922923404635244 0.0270908339727321 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A'] 22203 6316 ETDEQRLRDEY True H1975_Epitope_Rep1 1452.6481005258397 1452.64645490379 29.359 3 -0.10926855710070535 0.0270908339727321 0.9438714419765777 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2'] 123085 12709 VHAPPMQL True PC9_epitope_Rep5 891.46365833295 891.46256993586 53.89 2 -0.10941160965203207 0.02710730795711616 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 2554 6057 AERISISA True H1975_Epitope_Rep2 845.4606811274899 845.45958993586 28.275 2 -0.10942010715570305 0.02710730795711616 0.9438714419765777 ['ENST00000393640.8_1_16:70432915-70433221:-|nuORF'] 103767 16516 SRFPEALRL True PC9_epitope_Rep3 1087.61382772395 1087.6127299358602 68.665 2 -0.1094249797161415 0.02710730795711616 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 47268 23942 IYEPNFIFF True PC9_epitope_Rep3 1188.5855472874398 1188.5849749679298 97.38 1 -0.10942604707762184 0.02710730795711616 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 79809 13623 PIDGIDAVL True NCI_RA007_Epitope_Rep3 911.49639792987 911.4958449679301 60.887 1 -0.1094388805189176 0.02710730795711616 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000494204.1_1_X:24833141-24859977:+|nuORF'] 88074 16627 QVVGGIYGV True PC9_epitope_Rep6 890.4861675993399 890.48561496793 76.42 1 -0.10945168066685847 0.02710730795711616 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 102094 8721 SPPVPGPSA True PC9_epitope_Rep3 807.41266830591 807.41156993586 38.498 2 -0.10953926845420524 0.027141845645503895 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 86607 18029 QRDMYRILL True PC9_epitope_Rep1 1206.65431263694 1206.65266490379 74.14 3 -0.10956094405551918 0.027141845645503895 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant', 'nc|ENSG00000047410|P12270-2|TPR'] 125933 9432 VPAAAAVAA True PC9_epitope_Rep5 739.42283906679 739.42229496793 41.235 1 -0.10956134890152913 0.027141845645503895 0.9438714419765777 ['ENSG00000130699|ENST00000252996|TAF4'] 137559 14857 YLSEEVQAV True PC9_epitope_Rep4 1036.5076908895599 1036.5065899358601 65.086 2 -0.1095927406722233 0.027141845645503895 0.9438714419765777 ['ENST00000493829.5_1_2:85843459-85872221:+|nuORF', 'ENSG00000168883|ENST00000323701|USP39', 'ENST00000459775.5_1_2:85848673-85875928:+|nuORF', 'nc|ENSG00000168883|Q53GS9-2|USP39', 'ENST00000496047.5_1_2:85872080-85873002:+|nuORF'] 90785 21987 RKRRRRRRRWQ True PC9_epitope_Rep3 1709.0523063416397 1709.05120993586 89.872 2 -0.1096072578297105 0.027141845645503895 0.9438714419765777 ['ENST00000487093.5_1_3:51575631-51661706:+|nuORF'] 34086 12239 GPAAAFTAA True PC9_epitope_Rep1 775.38645355807 775.3859049679301 51.936 1 -0.10967959859022768 0.027141845645503895 0.9438714419765777 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 20373 21717 EPIPYEFMA True PC9_epitope_Rep3 1095.49468367771 1095.4935899358602 88.828 2 -0.10968591630799371 0.027141845645503895 0.9438714419765777 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 52759 8468 KQMEQVAQFLK True NCI_RA007_Epitope_Rep3 1348.7173068163195 1348.71565490379 40.388 3 -0.10968736059576607 0.027141845645503895 0.9438714419765777 ['ENSG00000149591|ENST00000392951|TAGLN', 'ENST00000533863.1_2_11:117074025-117074655:+|nuORF'] 91142 15969 RLPDIPLRQV True PC9_epitope_Rep5 1205.72444080209 1205.7233499358601 66.414 2 -0.1096889726089535 0.027141845645503895 0.9438714419765777 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8', 'ENST00000523321.5_1_8:95835614-95871872:+|nuORF'] 118801 7208 VEEDSRVFSA True H1975_Epitope_Rep2 1137.5302172392899 1137.52912993586 32.66 2 -0.10970224652167795 0.027156172572462344 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 27923 10800 FQNNVQVKV True PC9_epitope_Rep1 1074.5821932425 1074.58108993586 46.429 2 -0.10972379672547646 0.027156172572462344 0.9438714419765777 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9', 'ENST00000550699.5_1_12:58109828-58111744:+|nuORF'] 5202 12310 ALPRGFLSP True PC9_epitope_Rep6 956.5443511817999 956.54324993586 58.744 2 -0.1097310756630923 0.027156172572462344 0.9438714419765777 ['nc|ENSG00000167566|Q9HCH0-4|NCKAP5L', 'ENST00000491441.1_1_12:50196735-50197827:-|nuORF'] 27937 8918 FQPPIHQSL True NCI_RA007_Epitope_Rep3 1065.56072952193 1065.5596299358601 42.162 2 -0.10973880052001851 0.027156172572462344 0.9438714419765777 ['ENSG00000055163|ENST00000620254|CYFIP2', 'CYFIP2|p.A905Sfs*86|1|0.34|ENSG00000055163|chr5:157341122-157341122|G/TC|frameshift_variant', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'ENSG00000273749|ENST00000617928|CYFIP1', 'nc|ENSG00000273749|Q7L576-3|CYFIP1', 'nc|ENSG00000273749|Q7L576-2|CYFIP1'] 134925 6465 YAEFQYRRRHR True H1975_Epitope_Rep1 1580.8072759926 1580.80564490379 29.929 3 -0.10973969574564914 0.027156172572462344 0.9438714419765777 ['ENSG00000001629|ENST00000265742|ANKIB1'] 46554 11013 ITRARFEEL True PC9_epitope_Rep5 1133.61930702721 1133.61766490379 47.351 3 -0.10975056740276436 0.027156172572462344 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA2|p.T298A|1|0.1|ENSG00000126803|chr14:64541741-64541741|A/G|missense_variant', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 76653 10718 NTIMDLQTQLK True H1975_Epitope_Rep3 1303.6805869544298 1303.6794899358601 46.303 2 -0.1097795382802336 0.027156172572462344 0.9438714419765777 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-5|ERC1'] 114751 10572 TSVPPGSAL True PC9_epitope_Rep4 827.4388830537499 827.43778993586 48.405 2 -0.10978891473358854 0.027156172572462344 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'nc|ENSG00000181555|Q9BYW2-2|SETD2'] 47096 7893 IVVPKAAIVAR True NCI_RA007_Epitope_Rep4 1135.7441136175098 1135.74247490379 37.093 3 -0.10981491404176331 0.027156172572462344 0.9438714419765777 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP', 'ENST00000488537.1_1_1:145440216-145440639:+|nuORF'] 40231 13514 HRHPDAFYL True PC9_epitope_Rep5 1154.5621265042598 1154.56048490379 57.002 3 -0.10984655494037293 0.027156172572462344 0.9438714419765777 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1', 'nc|ENSG00000187778|Q96EZ8-4|MCRS1'] 72833 19941 NALGAISLE True PC9_epitope_Rep1 886.47599683846 886.47544496793 81.523 1 -0.10995025898106481 0.027174767972313985 0.9438714419765777 ['DNAI2|p.V460Cfs*36|1|0.25|ENSG00000171595|chr17:74310045-74310045|G/-|frameshift_variant', 'nc|ENSG00000171595|Q9GZS0-2|DNAI2', 'ENSG00000171595|ENST00000311014|DNAI2', 'ENST00000579055.5_1_17:72281302-72310327:+|nuORF'] 8409 8936 ATQMVRMILK True NCI_RA007_Epitope_Rep4 1189.6675201729297 1189.6658849037901 41.206 3 -0.10995325493906283 0.027174767972313985 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 113650 6229 TRDEDHIAL True PC9_epitope_Rep4 1068.51998690876 1068.5188899358602 31.006 2 -0.11000395967305682 0.027190688712816782 0.9438714419765777 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1'] 140329 9966 YYEEQHPEL True PC9_epitope_Rep4 1206.5193182024198 1206.51822993586 45.994 2 -0.11000456201497838 0.027190688712816782 0.9438714419765777 ['nc|ENSG00000008517|P24001-5|IL32', 'nc|ENSG00000008517|P24001-3|IL32', 'nc|ENSG00000008517|P24001-6|IL32', 'ENSG00000008517|ENST00000525643|IL32', 'nc|ENSG00000008517|P24001|IL32', 'nc|ENSG00000008517|P24001-4|IL32'] 32125 13871 GEYSFKIFP True NCI_RA007_Epitope_Rep3 1086.53859709502 1086.53750993586 61.887 2 -0.11004063897883086 0.027190688712816782 0.9438714419765777 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 81089 5956 PPGAPPPPPP True NCI_RA007_Epitope_Rep5 922.4912529797799 922.49014993586 29.593 2 -0.11009834159762676 0.027190688712816782 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'ENST00000413725.5_1_11:64533292-64535069:-|nuORF'] 58296 8022 LETIETPRP True H1975_Epitope_Rep2 1054.5658744720201 1054.56476993586 35.804 2 -0.11012205125260809 0.027190688712816782 0.9438714419765777 ['ENSG00000141424|ENST00000269187|SLC39A6'] 90072 9934 RGNDSILV True PC9_epitope_Rep1 872.4715801643599 872.47048993586 43.073 2 -0.11012382030010227 0.027190688712816782 0.9438714419765777 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant'] 3911 15274 AHDDSVMYL True PC9_epitope_Rep5 1049.44879611445 1049.4476899358601 63.761 2 -0.11014646183996045 0.027190688712816782 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 78534 14031 PDLQLNKQLIQ True H1975_Epitope_Rep1 1308.74015043588 1308.73904993586 59.134 2 -0.1102675804866995 0.0272459209750344 0.9438714419765777 ['ENSG00000116882|ENST00000325945|HAO2', 'nc|ENSG00000116882|Q9NYQ3-2|HAO2'] 43672 9605 IINEPTAAA True PC9_epitope_Rep3 898.4759968384599 898.47488993586 41.897 2 -0.11028124608908191 0.0272459209750344 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'HSPA2|p.D209Rfs*26|1|0.14|ENSG00000126803|chr14:64541469-64541470|-/T|frameshift_variant', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'HSPA2|p.A183S|1|0.29|ENSG00000126803|chr14:64541396-64541396|G/T|missense_variant', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENSG00000044574|ENST00000324460|HSPA5'] 17411 7115 EHFPNHQQL True PC9_epitope_Rep3 1148.53630567924 1148.5352099358602 32.376 2 -0.1102881562629169 0.0272459209750344 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 745 17157 AAVPSVCFL True H1975_Epitope_Rep2 905.46807500705 905.4675249679301 71.275 1 -0.11028975979146921 0.0272459209750344 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 17483 9810 EHGPNPIL True PC9_epitope_Rep1 875.45011644379 875.44900993586 42.596 2 -0.11030196614734258 0.0272459209750344 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 85972 16266 QPFGDHIISV True PC9_epitope_Rep6 1111.56620882519 1111.5651099358602 74.932 2 -0.11030726326687393 0.0272459209750344 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 136347 7976 YHDDDNSVL True PC9_epitope_Rep2 1076.44106788172 1076.43996993586 36.043 2 -0.11030893244654653 0.0272459209750344 0.9438714419765777 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 89803 6333 RFEEKHAYF True PC9_epitope_Rep6 1225.5880068989297 1225.58635490379 32.921 3 -0.11044148018536812 0.02726504295177999 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 137899 6470 YPNSGSVSA True PC9_epitope_Rep4 880.39266113732 880.3921149679301 32.0 1 -0.11048753420118848 0.02728255528255528 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 36769 9909 GVPENGYQTLY True H1975_Epitope_Rep1 1239.5771674317102 1239.57606993586 43.05 2 -0.11051247671947156 0.02728255528255528 0.9438714419765777 ['nc|ENSG00000174938|Q6UXD5-6|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-2|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-3|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5-5|SEZ6L2', 'nc|ENSG00000174938|Q6UXD5|SEZ6L2', 'ENSG00000174938|ENST00000617533|SEZ6L2'] 139830 5359 YVDGVEVHN True NCI_RA007_Epitope_Rep4 1030.47197408718 1030.47086993586 27.18 2 -0.11054335429713547 0.02728255528255528 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 54112 10010 KYMEDYHQF True PC9_epitope_Rep2 1259.52810906431 1259.5270099358602 43.831 2 -0.11061610047254852 0.02728255528255528 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 8215 2614 ATIDGSVNPK True NCI_RA007_Epitope_Rep5 1000.5189242796 1000.51782993586 14.747 2 -0.11063966051353395 0.027317034824306266 0.9438714419765777 ['ENSG00000116830|ENST00000369466|TTF2', 'ENST00000463696.1_1_1:117637951-117640053:+|nuORF', 'ENST00000492682.5_1_1:117635418-117640830:+|nuORF'] 47598 20865 IYNLLPDII True PC9_epitope_Rep4 1072.61684741572 1072.61574993586 88.412 2 -0.11064335365882635 0.027317034824306266 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000535804.1_1_12:6637788-6638275:+|nuORF'] 57239 10301 LEFKCRNILR True PC9_epitope_Rep3 1290.7230609030998 1290.72142490379 44.57 3 -0.11064377218413776 0.027317034824306266 0.9438714419765777 ['nc|ENSG00000067840|Q76G19-2|PDZD4', 'nc|ENSG00000067840|Q76G19|PDZD4', 'ENSG00000067840|ENST00000393758|PDZD4'] 59208 13101 LGGALSWE True H1975_Epitope_Rep1 831.41266830591 831.41211496793 55.482 1 -0.11065033890760467 0.027317034824306266 0.9438714419765777 ['ENST00000371717.7_1_9:139317959-139318130:+|nuORF'] 266 5754 AAGPPVEERFR True PC9_epitope_Rep5 1227.63601972051 1227.6343649037901 27.127 3 -0.11066205950895759 0.027317034824306266 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 132377 14345 VYMGCDLPP True PC9_epitope_Rep4 993.4299752461699 993.42886993586 63.082 2 -0.11069429138205872 0.027317034824306266 0.9438714419765777 ['nc|ENSG00000073146|Q9BXT6-2|MOV10L1', 'nc|ENSG00000073146|Q9BXT6-4|MOV10L1', 'ENSG00000073146|ENST00000262794|MOV10L1'] 110538 16966 TIREGETLEL True PC9_epitope_Rep5 1159.6084675599898 1159.60736993586 70.279 2 -0.1107194282697345 0.027317034824306266 0.9438714419765777 ['MDGA2|p.R624Efs*5|1|0.16|ENSG00000139915|chr14:46957594-46957594|A/-|frameshift_variant', 'MDGA2|p.G941Efs*2|1|0.22|ENSG00000139915|chr14:46855084-46855085|CC/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2', 'nc|ENSG00000139915|Q7Z553|MDGA2'] 117275 4489 VAAAESHPL True NCI_RA007_Epitope_Rep4 893.46068112749 893.45958993586 23.651 2 -0.11074352286279485 0.027317034824306266 0.9438714419765777 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 5689 8544 APAPLTSA True PC9_epitope_Rep5 726.39120458534 726.39065496793 37.809 1 -0.11077980722131489 0.027317034824306266 0.9438714419765777 ['ENSG00000247596|ENST00000305533|TWF2'] 38108 7251 HEPEPHIL True PC9_epitope_Rep2 970.4872302285 970.48612993586 33.279 2 -0.11079174753604609 0.027355264709350312 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 5157 20829 ALPDDLVEV True PC9_epitope_Rep2 969.5018772331299 969.50132496793 85.562 1 -0.1109153234289046 0.027355264709350312 0.9438714419765777 ['ENSG00000120756|ENST00000457734|PLS1'] 97411 6724 [Acetylation]-SGFSTEER True H1975_Epitope_Rep3 953.4090397937499 953.4084949679301 30.82 1 -0.1109503690076622 0.02739026211341219 0.9438714419765777 ['ENSG00000180817|ENST00000373232|PPA1'] 103751 18506 SRFGKYFEI True PC9_epitope_Rep5 1145.58694426977 1145.58529490379 76.207 3 -0.11096701892730132 0.02739026211341219 0.9438714419765777 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'MYO1F|p.A217Pfs*12|1|0.18|ENSG00000142347|chr19:8551862-8551862|C/-|frameshift_variant', 'ENST00000595325.5_1_19:8616850-8642307:-|nuORF', 'ENST00000598529.5_1_19:8616563-8619410:-|nuORF', 'ENSG00000157483|ENST00000288235|MYO1E'] 130580 5736 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 27.453 2 -0.11104210656414872 0.02739026211341219 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 118734 12104 VEDFDREFR True H1975_Epitope_Rep1 1211.55710069347 1211.5560099358602 51.572 2 -0.11107320360693829 0.02739026211341219 0.9438714419765777 ['ENSG00000125998|ENST00000374408|FAM83C'] 117933 21395 VAQVFLAEI True PC9_epitope_Rep4 988.5593325395998 988.55822993586 90.465 2 -0.1110772652420042 0.02739026211341219 0.9438714419765777 ['ENSG00000130158|ENST00000294618|DOCK6', 'ENST00000586702.1_1_19:11310175-11313198:-|nuORF', 'nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 1018 8368 AEAEPPSEVV True H1975_Epitope_Rep3 1026.48695544498 1026.48637496793 37.17 1 -0.11107876924673929 0.02739026211341219 0.9438714419765777 ['nc|ENSG00000123737|Q06265-3|EXOSC9', 'nc|ENSG00000123737|Q06265-4|EXOSC9', 'ENST00000509980.5_1_4:122722579-122736524:+|nuORF', 'ENSG00000123737|ENST00000243498|EXOSC9', 'nc|ENSG00000123737|Q06265-2|EXOSC9', 'ENST00000513654.5_1_4:122731225-122735207:+|nuORF'] 113148 13821 TQASYVTLI True H1975_Epitope_Rep3 994.5335117145798 994.5329649679301 58.468 1 -0.11108923033473324 0.02739026211341219 0.9438714419765777 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7', 'nc|ENSG00000184313|Q68CQ1-4|MROH7', 'nc|ENSG00000184313|Q68CQ1-8|MROH7'] 34811 15033 GQTSVVSFL True NCI_RA007_Epitope_Rep3 936.4916469025999 936.49054993586 66.593 2 -0.11113136937490782 0.02739026211341219 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2'] 72475 16011 MVADKFTEL True PC9_epitope_Rep2 1052.52123277872 1052.52012993586 66.841 2 -0.11125756629893539 0.027407218216467907 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 129689 21839 VTIPALLAA True PC9_epitope_Rep5 867.5429541994699 867.54184993586 89.038 2 -0.11128244844538301 0.027407218216467907 0.9438714419765777 ['ENST00000251473.9_1_19:11466164-11467636:+|nuORF'] 111991 11321 TLSNPQMSLE True NCI_RA007_Epitope_Rep2 1118.5277747111402 1118.5266699358601 48.626 2 -0.11128561987461409 0.027407218216467907 0.9438714419765777 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000495848.1_1_1:201979803-201981353:+|nuORF', 'ENST00000498017.1_1_1:201979803-201980477:+|nuORF'] 46799 10747 IVDKTIINA True PC9_epitope_Rep5 985.5807962601699 985.57968993586 46.33 2 -0.11131711243540707 0.027407218216467907 0.9438714419765777 ['ENSG00000221823|ENST00000234310|PPP3R1', 'PPP3R1|p.D141G|1|0.09|ENSG00000221823|chr2:68186511-68186511|T/C|missense_variant'] 118488 11053 VDSFSLEVA True H1975_Epitope_Rep1 965.4705771048499 965.47002496793 47.476 1 -0.11132718286221226 0.027407218216467907 0.9438714419765777 ['ENST00000359541.6_1_2:27560353-27560389:-|nuORF'] 87812 13317 QVIKDITQV True PC9_epitope_Rep5 1042.60225998074 1042.60116993586 56.236 2 -0.11136523261428333 0.02742632612966601 0.9438714419765777 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 107091 21827 SYMFVDENTF True PC9_epitope_Rep1 1251.5117902938298 1251.51127496793 88.768 1 -0.11144627535267525 0.02744058141818896 0.9438714419765777 ['ENST00000522309.1_1_X:134185341-134186138:-|nuORF', 'ENST00000520964.1_1_X:134185341-134186186:-|nuORF', 'ENSG00000203950|ENST00000370775|RTL8A', 'ENST00000464369.1_1_X:134166413-134167211:+|nuORF', 'ENSG00000212747|ENST00000391440|RTL8B', 'ENSG00000134590|ENST00000257013|RTL8C', 'ENST00000495563.5_1_X:134166413-134167211:+|nuORF'] 13666 11332 DQCNWQCYIDP True H1975_Epitope_Rep3 1383.5223720608699 1383.5212699358601 48.697 2 -0.1114561823412972 0.02744058141818896 0.9438714419765777 ['SLC30A10|p.P272Q|1|0.38|ENSG00000196660|chr1:219918398-219918398|G/T|missense_variant'] 2415 16843 AEQLMTLISAA True H1975_Epitope_Rep1 1146.59546034814 1146.5943699358602 70.197 2 -0.11147132125230325 0.02744058141818896 0.9438714419765777 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 664 13249 AATTVLQEL True NCI_RA007_Epitope_Rep3 944.5178616504398 944.51676993586 59.391 2 -0.11148753963489651 0.02744058141818896 0.9438714419765777 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-6|STAU2', 'nc|ENSG00000040341|Q9NUL3-8|STAU2', 'nc|ENSG00000040341|Q9NUL3-3|STAU2', 'nc|ENSG00000040341|Q9NUL3-4|STAU2'] 115490 4616 TVGEHIQVK True PC9_epitope_Rep4 1009.5556441414899 1009.55454993586 24.267 2 -0.11152620501409392 0.02744058141818896 0.9438714419765777 ['ASXL3|p.T1839I|1|0.05|ENSG00000141431|chr18:33745364-33745364|C/T|missense_variant'] 97646 7784 SHAQTVVL True PC9_epitope_Rep5 853.46576650793 853.46521496793 34.886 1 -0.11155857014932495 0.02744058141818896 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 96561 12537 SELPIVTPA True H1975_Epitope_Rep3 925.51204799401 925.51149496793 53.423 1 -0.11159633880094222 0.02744058141818896 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 28562 21768 FSLSWQLSL True PC9_epitope_Rep1 1079.56514619603 1079.56404993586 88.565 2 -0.11159675709337534 0.02744058141818896 0.9438714419765777 ['ABCB9|p.I338Hfs*47|1|0.23|ENSG00000150967|chr12:122948665-122948666|-/G|frameshift_variant', 'nc|ENSG00000150967|Q9NP78-3|ABCB9', 'ENST00000538895.5_1_12:123424612-123444782:-|nuORF', 'nc|ENSG00000150967|Q9NP78-6|ABCB9', 'nc|ENSG00000150967|Q9NP78-5|ABCB9', 'nc|ENSG00000150967|Q9NP78-7|ABCB9', 'nc|ENSG00000150967|Q9NP78-2|ABCB9', 'ENSG00000150967|ENST00000280560|ABCB9', 'ENST00000537276.5_1_12:123416657-123444319:-|nuORF'] 123403 6652 VIDPVAPR True NCI_RA007_Epitope_Rep1 865.5021520166499 865.50104993586 29.887 2 -0.11161370205714573 0.02744058141818896 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 95301 18986 SAERPLLSI True PC9_epitope_Rep5 984.5603951687599 984.55928993586 78.055 2 -0.11162067621831703 0.02744058141818896 0.9438714419765777 ['ENST00000458258.5_1_9:114981336-114981609:-|nuORF'] 133004 18968 VYVPHIHVW True PC9_epitope_Rep1 1148.6130994479597 1148.61145490379 77.744 3 -0.11169420986562288 0.027458066543583296 0.9438714419765777 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF'] 70195 24074 LYLPFSLTF True PC9_epitope_Rep2 1099.59538369515 1099.5942899358602 98.103 2 -0.11173447176755243 0.027458066543583296 0.9438714419765777 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 8898 19319 AVGGALAGLV True PC9_epitope_Rep1 826.4912529797799 826.49070496793 79.115 1 -0.11176200879791989 0.027458066543583296 0.9438714419765777 ['ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENST00000472564.1_1_13:113976589-113976733:+|nuORF'] 140638 13785 YYPAKIEAI True PC9_epitope_Rep4 1066.5698972233 1066.5688099358601 60.92 2 -0.11178132266922132 0.027458066543583296 0.9438714419765777 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.V175Sfs*48|1|0.38|ENSG00000129292|chr8:132803834-132803834|G/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 25809 21034 FGANAILGV True PC9_epitope_Rep3 860.4756029156399 860.4745099358599 86.185 2 -0.11180846848362667 0.027473930205612614 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 75928 12712 NRDYPPPPL True PC9_epitope_Rep5 1067.5399940773498 1067.5388899358602 53.902 2 -0.11182498979969759 0.027473930205612614 0.9438714419765777 ['ENSG00000004534|ENST00000266022|RBM6', 'nc|ENSG00000004534|P78332-3|RBM6'] 115062 18266 TTSDIDYAL True PC9_epitope_Rep3 997.46040634397 997.45985496793 75.468 1 -0.11187307392510273 0.027473930205612614 0.9438714419765777 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 101928 5597 SPLNTPHTSA True PC9_epitope_Rep3 1023.4985231881901 1023.4974299358599 26.606 2 -0.11187710605702109 0.027473930205612614 0.9438714419765777 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 45661 8848 ISISTSGG True PC9_epitope_Rep3 720.36538376032 720.36483496793 38.986 1 -0.11188528439127586 0.027473930205612614 0.9438714419765777 ['KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant'] 46768 13230 IVCDVPSASA True PC9_epitope_Rep4 960.45863252216 960.4580849679301 58.786 1 -0.11189533652884208 0.027473930205612614 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 9373 21763 AVVEFLIGL True PC9_epitope_Rep1 959.5691689473098 959.56806993586 88.545 2 -0.11191293454249436 0.027473930205612614 0.9438714419765777 ['ENSG00000127366|ENST00000247883|TAS2R5'] 132204 9599 VYKDHQTITI True PC9_epitope_Rep3 1216.6451874218799 1216.6435349037902 41.874 3 -0.11214875502480011 0.027489249739833885 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 66431 5803 LSRNLSEIK True NCI_RA007_Epitope_Rep4 1058.60840799034 1058.60730993586 28.946 2 -0.11219187068764978 0.027489249739833885 0.9438714419765777 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF'] 85515 18650 QLKDIFSEV True PC9_epitope_Rep4 1077.57062549929 1077.5695299358601 79.814 2 -0.11223143712988574 0.027489249739833885 0.9438714419765777 ['nc|ENSG00000101811|P33240-2|CSTF2', 'ENSG00000101811|ENST00000372972|CSTF2', 'ENSG00000177613|ENST00000331173|CSTF2T'] 109973 8729 THSLTTPVV True PC9_epitope_Rep6 953.51819600361 953.51708993586 43.443 2 -0.11226796892021355 0.027489249739833885 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 108153 17071 TDRQLFDTI True PC9_epitope_Rep2 1107.5560380643099 1107.5549499358601 70.915 2 -0.1122742337324552 0.027489249739833885 0.9438714419765777 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 122610 21045 VGTLAVVLG True PC9_epitope_Rep5 827.5116540711899 827.51110496793 86.009 1 -0.11230810147101619 0.027489249739833885 0.9438714419765777 ['ENSG00000146360|ENST00000275169|GPR6', 'nc|ENSG00000146360|P46095-2|GPR6'] 60236 16933 LIDQKVYEL True PC9_epitope_Rep1 1119.61757569171 1119.61646993586 69.956 2 -0.11232306580327096 0.027489249739833885 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000406934.5_1_22:38246060-38259001:+|nuORF', 'ENST00000476955.5_1_22:38245435-38266306:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 36624 11863 GVLLNVDR True H1975_Epitope_Rep3 884.50796567308 884.50686993586 50.78 2 -0.11232890427274274 0.027489249739833885 0.9438714419765777 ['ENSG00000185269|ENST00000409678|NOTUM'] 56872 11941 LEDLPTVEA True H1975_Epitope_Rep1 985.49679185269 985.49568993586 50.935 2 -0.11233631173090428 0.027507804676915826 0.9438714419765777 ['ENSG00000107159|ENST00000378357|CA9'] 120845 7599 VGDPHTVTV True PC9_epitope_Rep3 923.47124581119 923.47014993586 34.228 2 -0.11235979091432415 0.027507804676915826 0.9438714419765777 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 108294 7188 TEDAPRPPVP True H1975_Epitope_Rep2 1077.5454733806098 1077.54436993586 32.582 2 -0.11243503967430786 0.02752635815679422 0.9438714419765777 ['ENSG00000103126|ENST00000262320|AXIN1', 'nc|ENSG00000103126|O15169-2|AXIN1', 'AXIN1|p.G265Efs*149|1|0.54|ENSG00000103126|chr16:346232-346232|C/-|frameshift_variant'] 4536 6267 AKQLTTTI True NCI_RA007_Epitope_Rep5 874.51238234718 874.51128993586 30.785 2 -0.1124461626686746 0.02752635815679422 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 105231 11232 STRPASAAAL True PC9_epitope_Rep5 943.5086939490699 943.50758993586 48.194 2 -0.11245366986930962 0.02754166584872696 0.9438714419765777 ['ENST00000215941.8_1_22:38227477-38227936:-|nuORF'] 77534 17145 NYQTMSDTTF True PC9_epitope_Rep5 1206.4863038219798 1206.4852099358602 70.969 2 -0.1124577212071477 0.02754166584872696 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF', 'CTTNBP2NL-CAPZA1|1|fusion'] 6911 16042 AQLDNYGQQEL True PC9_epitope_Rep5 1277.5887947445701 1277.58768993586 66.694 2 -0.1125257542437489 0.02754166584872696 0.9438714419765777 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 93949 15653 RVLPPSALQSV True PC9_epitope_Rep5 1165.68190728377 1165.68080993586 65.222 2 -0.11254361778338301 0.02754166584872696 0.9438714419765777 ['nc|ENSG00000178999|Q96GD4-4|AURKB', 'ENSG00000178999|ENST00000585124|AURKB', 'nc|ENSG00000178999|Q96GD4-5|AURKB', 'nc|ENSG00000178999|Q96GD4-2|AURKB'] 100641 17251 SLQQYLLF True H1975_Epitope_Rep1 1010.5436824754598 1010.5431749679301 71.817 1 -0.11254794386860133 0.02754166584872696 0.9438714419765777 ['ENST00000462265.5_1_1:241761073-241761154:-|nuORF'] 38557 16428 HHFEQMLKL True PC9_epitope_Rep3 1181.6015487880898 1181.59990490379 68.327 3 -0.11259747224401782 0.02754166584872696 0.9438714419765777 ['nc|ENSG00000113569|O75694-2|NUP155', 'ENSG00000113569|ENST00000231498|NUP155'] 3919 16168 AHDGSVFTL True PC9_epitope_Rep1 945.4555957470501 945.45448993586 67.004 2 -0.11262264634299982 0.02754166584872696 0.9438714419765777 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4'] 132203 9510 VYKDHQTITI True PC9_epitope_Rep3 1216.6451874218799 1216.6435349037902 41.528 3 -0.11264028655198041 0.02754166584872696 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 69287 10624 LVPEQIGK True PC9_epitope_Rep1 882.5174677276199 882.51636993586 45.758 2 -0.1127469606765553 0.02756075536885085 0.9438714419765777 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1', 'ENST00000570977.1_1_17:52992089-53007568:+|nuORF', 'nc|ENSG00000141198|O75674-2|TOM1L1'] 24586 21966 FALVGSYTL True PC9_epitope_Rep5 969.51713337445 969.51602993586 89.526 2 -0.11293774834711458 0.027672560987576787 0.9438714419765777 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 68373 6123 LTSNNIDVKK True NCI_RA007_Epitope_Rep5 1130.6295373577398 1130.62844993586 30.232 2 -0.11294876062919217 0.027672560987576787 0.9438714419765777 ['ENSG00000189058|ENST00000343267|APOD'] 106201 15899 SVPLDLIVS True H1975_Epitope_Rep2 941.54334812229 941.54279496793 66.357 1 -0.11297878438866121 0.027672560987576787 0.9438714419765777 ['ENST00000524739.1_1_11:134129171-134129964:+|nuORF', 'ENST00000527082.5_1_11:134129171-134129738:+|nuORF'] 112845 17125 TPMSVLQQA True PC9_epitope_Rep1 973.49026700361 973.48916993586 70.695 2 -0.11300553622825123 0.027672560987576787 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant'] 32816 8712 GIGAPVSRQVP True NCI_RA007_Epitope_Rep1 1079.6087423435101 1079.60764993586 37.89 2 -0.1130285939983426 0.027672560987576787 0.9438714419765777 ['nc|ENSG00000158062|Q5T124-4|UBXN11', 'ENSG00000158062|ENST00000374222|UBXN11', 'nc|ENSG00000158062|Q5T124-6|UBXN11', 'ENST00000472155.5_1_1:26611834-26629395:-|nuORF'] 124882 13793 VLLNEDGKQL True PC9_epitope_Rep4 1127.6186383208699 1127.61754993586 60.95 2 -0.11306086316747926 0.027672560987576787 0.9438714419765777 ['ENSG00000164961|ENST00000318410|WASHC5', 'WASHC5|p.Y1056Tfs*28|1|0.3|ENSG00000164961|chr8:125037249-125037252|TGTA/-|frameshift_variant'] 53526 17630 KVPEWVDTV True PC9_epitope_Rep1 1071.5600608155898 1071.5594749679299 72.606 1 -0.11306313781413999 0.027672560987576787 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 130590 6832 VVAAHLAGA True PC9_epitope_Rep5 807.46028720467 807.45918993586 31.251 2 -0.11309113350138446 0.027672560987576787 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 6032 13126 APLRLIAA True PC9_epitope_Rep2 823.5279728416699 823.52686993586 55.762 2 -0.11309232242293257 0.027672560987576787 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant', 'MDN1|p.G347Sfs*36|2|0.35|ENSG00000112159|chr6:89790201-89790219|AGGAGGCTTTGTTCTACCT/-|frameshift_variant'] 66904 19465 LSWRLCFNQVL True PC9_epitope_Rep3 1377.72272654993 1377.7216299358602 80.1 2 -0.11317010526076601 0.027672560987576787 0.9438714419765777 ['ENST00000382044.8_1_15:43699501-43699630:-|nuORF'] 109785 5015 THISSQNSEL True PC9_epitope_Rep2 1114.52546621202 1114.52436993586 24.662 2 -0.11317696159286586 0.027672560987576787 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 137581 14180 YLSQDTVSV True PC9_epitope_Rep4 1010.49204082542 1010.49094993586 62.446 2 -0.11321435844468113 0.027709093763491503 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 54526 17220 LAAGLLEEL True NCI_RA007_Epitope_Rep5 927.52769805815 927.5271449679301 73.008 1 -0.11324428519727518 0.027709093763491503 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1', 'ENST00000469476.2_1_1:40313418-40313755:-|nuORF'] 15638 20500 EAWNGFVAA True PC9_epitope_Rep1 963.4450310633498 963.4444849679301 83.665 1 -0.1132511561102156 0.027709093763491503 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1', 'ENSG00000128335|ENST00000358502|APOL2'] 70035 17925 LYGPSSVSF True PC9_epitope_Rep6 955.46509780159 955.46400993586 81.575 2 -0.11330631774867571 0.027709093763491503 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 8683 20964 AVDAFFTAV True PC9_epitope_Rep4 939.4701831820299 939.46908993586 88.799 2 -0.11336022985397032 0.027709093763491503 0.9438714419765777 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 104445 14554 SSLLPKEIV True PC9_epitope_Rep6 984.58554728744 984.58444993586 67.875 2 -0.11337359008934174 0.027723277350494426 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 44597 10129 IPGTGFTVDA True PC9_epitope_Rep3 976.4865615221598 976.48546993586 43.913 2 -0.11337401996290215 0.027723277350494426 0.9438714419765777 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 53536 15969 KVPEWVDTV True PC9_epitope_Rep4 1071.5600608155898 1071.5594749679299 69.354 1 -0.11337702219618072 0.027723277350494426 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 8687 8845 AVDATVNQV True PC9_epitope_Rep4 915.4661604307499 915.46506993586 41.554 2 -0.11340889953553175 0.027723277350494426 0.9438714419765777 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 8824 13971 AVFPSIVG True NCI_RA007_Epitope_Rep3 788.4432401582 788.44269496793 62.266 1 -0.1134435502990716 0.027723277350494426 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 33665 16366 GLPHGFCTV True PC9_epitope_Rep5 929.44292288837 929.44182993586 67.95 2 -0.11347656207336107 0.027723277350494426 0.9438714419765777 ['ENSG00000145391|ENST00000274031|SETD7'] 110337 12019 TIKKGDLLL True NCI_RA007_Epitope_Rep4 999.6328318330299 999.63172993586 53.235 2 -0.11348364198903652 0.027723277350494426 0.9438714419765777 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6'] 124802 6737 VLLGETGK True PC9_epitope_Rep5 815.47526856247 815.47416993586 30.885 2 -0.11349134376084652 0.027723277350494426 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 97405 16508 SGFGGITML True H1975_Epitope_Rep1 881.43168949833 881.4311449679301 68.868 1 -0.11350434961312142 0.027723277350494426 0.9438714419765777 ['nc|ENSG00000141219|Q9BSJ5-2|MTNAP1', 'nc|ENSG00000141219|Q9BSJ5-3|MTNAP1', 'ENSG00000141219|ENST00000535032|C17orf80'] 118141 9795 VAVEPGAAV True PC9_epitope_Rep6 811.4439684341899 811.44286993586 48.128 2 -0.113515961508662 0.027723277350494426 0.9438714419765777 ['ENSG00000171421|ENST00000505059|MRPL36'] 103920 11063 SRNKDTYFL True PC9_epitope_Rep5 1142.57202248162 1142.57038490379 47.542 3 -0.11353688021795891 0.027740176171698744 0.9438714419765777 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 120454 19436 VFTYVGALF True NCI_RA007_Epitope_Rep5 1015.5378688190298 1015.5372749679301 81.648 1 -0.11356848395834325 0.027740176171698744 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 43590 10484 IIGGKNSL True PC9_epitope_Rep2 800.47560291564 800.4745099358599 45.647 2 -0.1135903697847023 0.027740176171698744 0.9438714419765777 ['ENSG00000164099|ENST00000296498|PRSS12'] 28686 14096 FSTALYGESDL True H1975_Epitope_Rep3 1201.55028397753 1201.54977496793 59.547 1 -0.11359152056271495 0.027740176171698744 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1'] 77155 15805 NYENKQYLF True PC9_epitope_Rep3 1217.57168812845 1217.5705899358602 65.948 2 -0.11361349517697399 0.027740176171698744 0.9438714419765777 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 92314 4520 RQLPSSHAL True NCI_RA007_Epitope_Rep4 1007.55122746739 1007.55012993586 23.781 2 -0.11362470249506419 0.027758705247670427 0.9438714419765777 ['ENSG00000115084|ENST00000245680|SLC35F5', 'nc|ENSG00000115084|Q8WV83-2|SLC35F5', 'ENST00000498768.1_1_2:114500256-114514010:-|nuORF', 'ENST00000460863.1_1_2:114500256-114501404:-|nuORF'] 132702 14227 VYSEVAAYEF True NCI_RA007_Epitope_Rep4 1176.5339056373998 1176.5333749679298 62.004 1 -0.1136254842667381 0.027758705247670427 0.9438714419765777 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000433341.5_1_22:31795606-31819296:+|nuORF', 'DRG1-MYO18B|1|fusion'] 67872 19822 LTKGYNSVLNV True PC9_epitope_Rep5 1206.66083748602 1206.6597499358602 81.291 2 -0.11367362801065259 0.027777777777777776 0.9438714419765777 ['ENST00000512560.5_1_5:79279160-79279214:-|nuORF'] 15105 6475 EADSIAAVA True H1975_Epitope_Rep2 845.4130622287299 845.4125149679301 29.822 1 -0.11385307207961913 0.027816466249485063 0.9438714419765777 ['nc|ENSG00000067208|O60447|EVI5', 'nc|ENSG00000067208|O60447-2|EVI5', 'ENSG00000067208|ENST00000684568|EVI5'] 74091 16136 NHVISPLL True PC9_epitope_Rep3 891.5178020807899 891.51670993586 67.216 2 -0.11398495003207117 0.02787312920499794 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 105326 8621 [Acetylation]-STVHEILC[Carbamidomethyl]K True H1975_Epitope_Rep3 1127.56449516876 1127.5633899358602 38.154 2 -0.1139878634072933 0.02787312920499794 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 87923 19158 QVPDWLHHL True PC9_epitope_Rep3 1143.58252759567 1143.5808749037901 78.912 3 -0.11399550752374012 0.02787312920499794 0.9438714419765777 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 46375 11036 ITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1118.5277749905702 1118.5266699358601 47.412 2 -0.11402022776222862 0.02787312920499794 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 119740 20463 VETLPAWNL True PC9_epitope_Rep1 1041.54949613189 1041.54838993586 83.523 2 -0.1140699198103566 0.02789165015789577 0.9438714419765777 ['ENST00000382349.4_1_19:1776116-1776464:+|nuORF'] 79377 14207 PGLELPLMMAK True PC9_epitope_Rep3 1198.64538774602 1198.6442899358601 59.735 2 -0.11407749299942195 0.02789165015789577 0.9438714419765777 ['nc|ENSG00000161542|Q14558|PRPSAP1', 'ENSG00000161542|ENST00000446526|PRPSAP1', 'ENST00000472686.1_1_17:74309820-74324990:-|nuORF'] 53514 16284 KVPEIEVTV True PC9_epitope_Rep1 1012.5804619069999 1012.57936993586 67.454 2 -0.11412752447419063 0.02790907486221978 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 72680 24445 MYIIPVVLF True PC9_epitope_Rep2 1093.6245756484498 1093.6234699358602 99.601 2 -0.11413329249713569 0.02790907486221978 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10'] 83315 14452 QALLDLHAL True NCI_RA007_Epitope_Rep2 992.5654805492001 992.56438993586 60.877 2 -0.11418195133741459 0.02790907486221978 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL', 'FTL-FTH1|1|fusion'] 131610 14778 VVYGGGAAEI True PC9_epitope_Rep5 934.4759968384599 934.47488993586 61.843 2 -0.11420360405218706 0.02790907486221978 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 137894 6778 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.39156993586 31.477 2 -0.11450707357305331 0.02794665620709943 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 102653 22178 SQDGSFYFL True PC9_epitope_Rep2 1062.46582607758 1062.4652749679299 90.794 1 -0.1145448815797507 0.02794665620709943 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 63267 20976 LPALSLLAA True PC9_epitope_Rep4 867.5429541994699 867.5424049679301 88.845 1 -0.11455008322133285 0.02794665620709943 0.9438714419765777 ['ENST00000311626.8_1_17:46629537-46651367:-|nuORF'] 138740 15704 YSAPEILL True H1975_Epitope_Rep3 904.4905842734399 904.49003496793 65.835 1 -0.1147207613143843 0.027961880858072864 0.9438714419765777 ['ENSG00000163788|ENST00000296088|SNRK', 'nc|ENSG00000163788|Q9NRH2-2|SNRK', 'ENST00000462810.1_1_3:43344695-43373803:+|nuORF'] 85712 17717 QLSEGSITL True PC9_epitope_Rep1 946.49712620586 946.49602993586 72.944 2 -0.11474441917567854 0.027961880858072864 0.9438714419765777 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'CEP192|p.S1464Ffs*9|1|0.11|ENSG00000101639|chr18:13059212-13059213|-/T|frameshift_variant', 'ENST00000513432.5_1_18:13030586-13057756:+|nuORF', 'CEP192|p.Q1109Efs*2|1|0.12|ENSG00000101639|chr18:13055915-13055916|CA/-|frameshift_variant'] 99342 14487 SLDRQLTGL True PC9_epitope_Rep1 1001.55055876105 1001.54946993586 60.549 2 -0.11476130923435832 0.027961880858072864 0.9438714419765777 ['ENSG00000168434|ENST00000307149|COG7'] 16738 7553 EEYEYMNRRRR True PC9_epitope_Rep1 1600.75285746124 1600.75120490379 33.871 3 -0.11481688499342817 0.027961880858072864 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 69316 14593 LVPPDQPEV True PC9_epitope_Rep5 992.51786165044 992.51676993586 61.133 2 -0.11482020045467382 0.027961880858072864 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 8864 11981 AVFPSIVGRPR True PC9_epitope_Rep4 1197.69822605425 1197.6965849037902 53.878 3 -0.11486633439046892 0.027961880858072864 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 53388 8471 KVASLLHQV True PC9_epitope_Rep2 993.5971150306501 993.59600993586 37.95 2 -0.11487723851186137 0.027961880858072864 0.9438714419765777 ['ENST00000502256.1_1_4:2743986-2746461:-|nuORF', 'ENST00000505186.1_1_4:2743986-2747794:-|nuORF', 'nc|ENSG00000168884|Q8NFZ5-2|TNIP2', 'ENSG00000168884|ENST00000315423|TNIP2'] 85583 22451 QLLNWVYLSL True PC9_epitope_Rep5 1247.69140933831 1247.6903099358601 91.358 2 -0.11487905547338362 0.027961880858072864 0.9438714419765777 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 118469 13397 VDRGMQVL True PC9_epitope_Rep3 916.48003667308 916.47892993586 56.562 2 -0.11497606580784775 0.027974906881003726 0.9438714419765777 ['ENSG00000170426|ENST00000293502|SDR9C7'] 135486 5923 YEDGGKPPVP True H1975_Epitope_Rep2 1057.50802524273 1057.5069299358602 27.767 2 -0.11505387406883474 0.027974906881003726 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 105422 18387 SVAGGFVGL True PC9_epitope_Rep6 805.4334037504899 805.4328549679301 83.37 1 -0.11508354315571956 0.027974906881003726 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6', 'SLC6A6|p.L206Cfs*11|1|0.18|ENSG00000131389|chr3:14457966-14457966|T/-|frameshift_variant'] 123166 11236 VHGPPVQL True PC9_epitope_Rep1 845.47593726881 845.47484993586 48.099 2 -0.11508559228897115 0.027974906881003726 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 95148 12488 SAAALAVI True NCI_RA007_Epitope_Rep4 714.4275900940601 714.4270449679301 55.047 1 -0.11510614448212288 0.027974906881003726 0.9438714419765777 ['ENSG00000271503|ENST00000651122|CCL5', 'nc|ENSG00000271503|P13501|CCL5'] 109971 9248 THSLTTPVV True PC9_epitope_Rep4 953.51819600361 953.51708993586 43.169 2 -0.11517405648209493 0.027974906881003726 0.9438714419765777 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D'] 31487 12231 GEEMPGLSV True H1975_Epitope_Rep1 917.4164333570099 917.41532993586 52.069 2 -0.1151743272103429 0.027974906881003726 0.9438714419765777 ['nc|ENSG00000101447|Q9H4H8-2|FAM83D', 'ENSG00000101447|ENST00000619850|FAM83D'] 262 5704 AAGPPVEERFR True PC9_epitope_Rep1 1227.63601972051 1227.6343649037901 26.762 3 -0.11520470796459079 0.027974906881003726 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 11819 9640 DHLPNAAL True PC9_epitope_Rep6 849.43446637965 849.43336993586 47.428 2 -0.11521105444676336 0.027974906881003726 0.9438714419765777 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 12568 15365 DLDLGWPEVP True H1975_Epitope_Rep2 1139.54989005471 1139.5487899358602 64.26 2 -0.11521141926566354 0.027974906881003726 0.9438714419765777 ['ENSG00000125998|ENST00000374408|FAM83C'] 130582 5934 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 28.215 2 -0.11521662398301484 0.027974906881003726 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 15914 19095 EDRLGSVLL True PC9_epitope_Rep5 1000.5553097883198 1000.55420993586 78.479 2 -0.11522896996031416 0.027974906881003726 0.9438714419765777 ['ENSG00000132205|ENST00000254528|EMILIN2'] 42561 8583 IESPAVAAP True H1975_Epitope_Rep2 853.4545331178899 853.45342993586 37.968 2 -0.11523882478718767 0.027991767127315496 0.9438714419765777 ['ENSG00000106211|ENST00000248553|HSPB1'] 47484 18959 IYKIDFVRF True PC9_epitope_Rep4 1199.6702799709099 1199.66863490379 81.013 3 -0.11527151658511635 0.027991767127315496 0.9438714419765777 ['nc|ENSG00000109103|Q13432-2|UNC119', 'ENSG00000109103|ENST00000335765|UNC119'] 28705 18809 FSVDDVQTV True PC9_epitope_Rep2 1008.4763907612801 1008.47528993586 77.72 2 -0.11534032229125787 0.027991767127315496 0.9438714419765777 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 5153 17859 ALNSQAQVI True PC9_epitope_Rep3 942.5134449763399 942.51289496793 73.893 1 -0.11539867350892649 0.027991767127315496 0.9438714419765777 ['chr7:76490750-76492153|119|16.92|0.97|4.13|+|0|TE_info:AluJo,AluJo_dup29597,Alu,SINE,donor,-,76490617,76490750|None,DTX2|2'] 136808 21365 YITDLFQVL True NCI_RA007_Epitope_Rep5 1110.59611197114 1110.5950099358602 89.24 2 -0.11539986352397501 0.027991767127315496 0.9438714419765777 ['nc|ENSG00000170632|Q8N2F6-2|ARMC10', 'ENSG00000170632|ENST00000323716|ARMC10', 'ENST00000313754.4_1_3:94225612-94226386:-|nuORF', 'nc|ENSG00000170632|Q8N2F6-5|ARMC10'] 72705 21149 MYPDVFAHF True PC9_epitope_Rep3 1125.4953523840497 1125.4942499358601 86.635 2 -0.11559307092845994 0.02803042182844598 0.9438714419765777 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 116220 21142 TVTSVLTSV True PC9_epitope_Rep2 905.50696261357 905.50586993586 86.777 2 -0.11562476633244836 0.028046724942181803 0.9438714419765777 ['ENSG00000106689|ENST00000373615|LHX2'] 117429 14023 VADPVEAVL True NCI_RA007_Epitope_Rep4 911.4963979298699 911.4958449679301 61.221 1 -0.11572762301257801 0.028046724942181803 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant', 'nc|ENSG00000137497|Q14980-5|NUMA1', 'ENST00000534987.5_1_11:71728600-71747007:-|nuORF', 'ENST00000537905.5_1_11:71735188-71747007:-|nuORF'] 123492 14964 VIGPPVVL True H1975_Epitope_Rep2 792.5109257952 792.51037496793 62.71 1 -0.11574218806237536 0.028046724942181803 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 27026 23173 FLLPVINEM True PC9_epitope_Rep2 1074.57835373202 1074.5772499358602 94.62 2 -0.11581087203138894 0.028046724942181803 0.9438714419765777 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 85118 15841 QISDTSVVL True PC9_epitope_Rep6 960.51277627 960.51222496793 73.202 1 -0.11582444782254415 0.028046724942181803 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 129154 17928 VTDDLVCLVY True H1975_Epitope_Rep3 1138.55801221026 1138.5569099358602 75.087 2 -0.11587323111078225 0.028046724942181803 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 84176 10331 QESGSSVFY True H1975_Epitope_Rep2 1002.42944056886 1002.42834993586 44.748 2 -0.11589736942752582 0.02806577425866766 0.9438714419765777 ['nc|ENSG00000158816|Q5TIE3-5|VWA5B1', 'ENSG00000158816|ENST00000289815|VWA5B1', 'nc|ENSG00000158816|Q5TIE3|VWA5B1', 'nc|ENSG00000158816|Q5TIE3-3|VWA5B1', 'nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 11954 7496 DHSVAESL True PC9_epitope_Rep4 856.3926611373201 856.39156993586 36.196 2 -0.11595610497855016 0.028084272415482607 0.9438714419765777 ['ENSG00000104823|ENST00000221418|ECH1', 'ENST00000601333.1_1_19:39306255-39306727:-|nuORF'] 28672 9315 FSSPSVHNV True PC9_epitope_Rep5 972.4664947839201 972.46538993586 40.784 2 -0.11596050658098407 0.028084272415482607 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 77337 11688 NYKKFYEQF True PC9_epitope_Rep6 1265.6080736371698 1265.60641490379 56.088 3 -0.11600387306384448 0.028103319876141574 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 105385 17149 SVAAQLTGV True PC9_epitope_Rep4 844.4654321547599 844.46432993586 73.97 2 -0.11604507459091185 0.028140861078994297 0.9438714419765777 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 136401 8117 YHEHQANLL True PC9_epitope_Rep3 1123.5410567065098 1123.53940490379 36.198 3 -0.11609016424511064 0.028140861078994297 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 120006 7881 VFCFRYKIQAK True NCI_RA007_Epitope_Rep1 1401.75911205865 1401.75745490379 34.648 3 -0.11609590092830172 0.028140861078994297 0.9438714419765777 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'STAT2|p.L535Ifs*6|1|0.33|ENSG00000170581|chr12:56348778-56348779|-/T|frameshift_variant', 'ENST00000557417.5_3_12:56748997-56753873:-|nuORF', 'ENST00000556140.5_1_12:56748997-56753873:-|nuORF'] 76219 7995 NRYDGIYKV True PC9_epitope_Rep6 1126.5771078620598 1126.5754649037901 40.217 3 -0.1161994275598954 0.02815880232011287 0.9438714419765777 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF', 'ENSG00000147854|ENST00000276893|UHRF2'] 263 5798 AAGPPVEERFR True PC9_epitope_Rep1 1227.63601972051 1227.6343649037901 27.118 3 -0.11620092847415892 0.02815880232011287 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 57164 7163 LEERTPPVP True H1975_Epitope_Rep1 1036.5553097883198 1036.5542099358602 32.576 2 -0.11622240024217795 0.02815880232011287 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 86189 6407 QPTETPVA True PC9_epitope_Rep5 841.4181476091699 841.41704993586 29.622 2 -0.11629387147578867 0.028176741451944744 0.9438714419765777 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 105475 14307 SVASTITGV True PC9_epitope_Rep4 833.44944773745 833.44834993586 62.931 2 -0.11632697704214252 0.028176741451944744 0.9438714419765777 ['ENSG00000147872|ENST00000276914|PLIN2'] 37290 18485 GVVPQLVKL True PC9_epitope_Rep4 951.6117024656298 951.61115496793 79.175 1 -0.11632756975738717 0.028176741451944744 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 133501 3852 WGYRKCQHK True NCI_RA007_Epitope_Rep2 1204.59238108672 1204.59073490379 19.618 3 -0.11639287018704204 0.028194126060463568 0.9438714419765777 ['ENSG00000173705|ENST00000309558|SUSD5'] 2751 5435 AEVDAAM[Oxidation]AA True H1975_Epitope_Rep1 863.3694835450299 863.36838993586 25.964 2 -0.11641777070418478 0.028194126060463568 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 62900 23553 LMTFFLAL True PC9_epitope_Rep4 954.5248616071799 954.52376993586 98.904 2 -0.11642150281913877 0.028194126060463568 0.9438714419765777 ['ENSG00000174669|ENST00000357440|SLC29A2'] 64108 16693 LQEEKLIYV True PC9_epitope_Rep2 1133.63322575585 1133.6321299358601 69.457 2 -0.11649515017891737 0.028194126060463568 0.9438714419765777 ['ENSG00000122591|ENST00000432176|HYCC1', 'nc|ENSG00000122591|Q9BYI3-2|HYCC1'] 91961 5671 RPPPPPPPP True PC9_epitope_Rep3 950.5337864980999 950.53268993586 26.888 2 -0.11657302527930154 0.028225016649038273 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 111020 14122 TLDLGTVKI True PC9_epitope_Rep4 958.5698972233 958.56880993586 62.225 2 -0.11661439035951116 0.028225016649038273 0.9438714419765777 ['ENSG00000109927|ENST00000392793|TECTA'] 30026 15772 FYHKYFNYL True PC9_epitope_Rep6 1293.61824439805 1293.6166049037902 72.91 3 -0.11664356244925665 0.028225016649038273 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 43161 13601 IGRSSELAV True PC9_epitope_Rep2 930.5134449763399 930.51234993586 57.604 2 -0.11666341255634421 0.028225016649038273 0.9438714419765777 ['ENSG00000226763|ENST00000417606|SRRM5'] 124376 17119 VLDYLQQEVP True PC9_epitope_Rep3 1202.6183039676998 1202.61720993586 71.001 2 -0.11669359997095871 0.028225016649038273 0.9438714419765777 ['nc|ENSG00000163803|Q6P1J6-3|PLB1', 'ENSG00000163803|ENST00000327757|PLB1', 'nc|ENSG00000163803|Q6P1J6-4|PLB1'] 116616 19499 TYGPSFPAF True PC9_epitope_Rep6 985.4545331178899 985.4539849679301 87.664 1 -0.1167004955437207 0.028225016649038273 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB', 'RALGAPB|p.V262F|1|0.49|ENSG00000170471|chr20:38509120-38509120|G/T|missense_variant'] 116875 5475 TYNQKHSLF True NCI_RA007_Epitope_Rep3 1136.5614577979202 1136.56036993586 28.543 2 -0.11678482430887814 0.028225016649038273 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 36431 19745 GVIGGGVFQAI True PC9_epitope_Rep6 1016.5654805491998 1016.56438993586 88.608 2 -0.11683359491370802 0.028225016649038273 0.9438714419765777 ['ENST00000472645.1_1_X:48751014-48754386:-|nuORF', 'ENSG00000126768|ENST00000696123|TIMM17B', 'nc|ENSG00000126768|O60830-2|TIMM17B', 'ENST00000495490.6_1_X:48752719-48755059:-|nuORF', 'ENST00000464663.1_1_X:48753741-48755032:-|nuORF'] 116893 18599 TYPAELNNI True PC9_epitope_Rep3 1033.50802524273 1033.5069299358602 76.764 2 -0.1168397031892694 0.028225016649038273 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 5473 10818 AMDVYKNLY True H1975_Epitope_Rep2 1115.53213181559 1115.53102993586 46.64 2 -0.11692833050535906 0.028225016649038273 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 53541 7557 KVPGCRRRRRE True H1975_Epitope_Rep3 1411.8055021707899 1411.8044099358601 34.049 2 -0.11695345886460067 0.028225016649038273 0.9438714419765777 ['ENST00000487849.7_1_17:46669689-46683672:+|nuORF', 'ENST00000491264.5_1_17:46679554-46683672:+|nuORF'] 63362 4977 LPEVGAKG True H1975_Epitope_Rep1 769.4334037504899 769.43230993586 24.219 2 -0.11696035691029345 0.028225016649038273 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS', 'ENST00000489655.1_1_2:74689957-74690534:-|nuORF'] 5801 16120 APFGGFKMS True PC9_epitope_Rep3 940.4476739156399 940.44656993586 67.156 2 -0.11700230859806392 0.028225016649038273 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 100557 19547 SLPVTIPSA True PC9_epitope_Rep5 883.5014833103099 883.5009349679301 80.24 1 -0.11701189127092812 0.028225016649038273 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 96616 4003 SEMRAPPAA True NCI_RA007_Epitope_Rep3 928.4436511643598 928.44254993586 22.167 2 -0.11701677320166952 0.028225016649038273 0.9438714419765777 ['nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000108312|ENST00000436088|UBTF', 'ENST00000531368.1_1_17:42286674-42287095:-|nuORF', 'UBTF|p.K594Rfs*63|1|0.17|ENSG00000108312|chr17:44209476-44209476|T/-|frameshift_variant'] 123487 16379 VIGPELVHV True PC9_epitope_Rep4 961.55966689277 961.55856993586 70.963 2 -0.11710959411913004 0.028242944160448126 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'ENST00000485409.5_1_3:196921289-197023334:-|nuORF'] 26842 21388 FLEQELETI True PC9_epitope_Rep2 1120.56520576568 1120.5641099358602 87.74 2 -0.11712258199034116 0.028242944160448126 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 68119 10576 LTPERFHNL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 45.628 3 -0.11713264658928632 0.028242944160448126 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 104523 7097 SSRLRWKP True H1975_Epitope_Rep3 1028.5879473292798 1028.58684993586 32.268 2 -0.11717390202529694 0.028259209212149698 0.9438714419765777 ['PCNT|p.G1782Afs*21|1|0.22|ENSG00000160299|chr21:46411414-46411414|G/-|frameshift_variant'] 132526 12284 VYPGDPLRF True NCI_RA007_Epitope_Rep3 1062.5498304850598 1062.5487299358601 55.484 2 -0.11718740864060373 0.028259209212149698 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34'] 118032 18906 VATDFFTVL True NCI_RA007_Epitope_Rep4 1011.5276980581499 1011.52660993586 81.749 2 -0.11718988740947349 0.028259209212149698 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 59198 23091 LGFVALVLS True PC9_epitope_Rep2 917.5586042636099 917.55805496793 94.309 1 -0.11720662183267976 0.028259209212149698 0.9438714419765777 ['ENST00000409811.5_2_2:120015228-120020911:+|nuORF', 'nc|ENSG00000115107|Q658P3-3|STEAP3', 'nc|ENSG00000115107|Q658P3|STEAP3', 'ENSG00000115107|ENST00000393110|STEAP3'] 96551 11883 SELPGAFEA True NCI_RA007_Epitope_Rep4 919.4287122928699 919.42760993586 52.705 2 -0.117285673834144 0.028259209212149698 0.9438714419765777 ['ENSG00000126247|ENST00000246533|CAPNS1'] 84826 10406 QHLQAAGQVL True PC9_epitope_Rep5 1063.57744221523 1063.5763499358602 45.012 2 -0.11730710488518103 0.028259209212149698 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 112261 20350 TLYQSNTIL True PC9_epitope_Rep3 1051.55497543515 1051.5538699358601 83.524 2 -0.11736281032027178 0.028278239072536425 0.9438714419765777 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000489040.1_1_11:67351618-67352251:+|nuORF', 'GSTP1|p.G74Afs*20|1|0.12|ENSG00000084207|chr11:67584759-67584759|G/-|frameshift_variant', 'ENST00000494593.1_1_11:67352122-67352251:+|nuORF'] 70726 6606 MDYHRRQREER True PC9_epitope_Rep2 1574.74844078714 1574.7467849037898 30.822 3 -0.11737679979752588 0.028291173936878376 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 112676 21379 TPFTGPFISV True PC9_epitope_Rep4 1064.55424715916 1064.55367496793 90.403 1 -0.11739320008497485 0.028291173936878376 0.9438714419765777 ['ENSG00000164142|ENST00000435205|FHIP1A'] 83287 20129 QAFVLARYL True PC9_epitope_Rep5 1079.61276509479 1079.6116699358602 82.474 2 -0.11748092771701486 0.028291173936878376 0.9438714419765777 ['ENST00000475890.5_1_12:53552117-53555118:-|nuORF', 'nc|ENSG00000139631|Q9Y600-2|CSAD', 'ENSG00000139631|ENST00000444623|CSAD', 'nc|ENSG00000139631|Q9Y600-3|CSAD'] 46422 17987 ITLDGGAIYEA True PC9_epitope_Rep6 1121.5604547384098 1121.5593499358602 81.814 2 -0.11749399862084178 0.028291173936878376 0.9438714419765777 ['ENSG00000163975|ENST00000296350|MELTF', 'nc|ENSG00000163975|P08582-2|MELTF', 'ENST00000473501.1_1_3:196753297-196754890:-|nuORF'] 96055 3594 SEAPPTNQA True H1975_Epitope_Rep2 913.41412485789 913.41302993586 18.729 2 -0.11749415920679045 0.028291173936878376 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 632 10011 AATATFAAA True PC9_epitope_Rep5 793.3970182417698 793.39592993586 43.484 2 -0.11752057881047151 0.028291173936878376 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 26501 8921 FISNQTLQ True H1975_Epitope_Rep3 949.48689587533 949.48578993586 39.314 2 -0.11754441359476273 0.028291173936878376 0.9438714419765777 ['ENST00000377865.6_1_13:67799697-67799736:-|nuORF'] 112755 6739 TPKPVSIAT True PC9_epitope_Rep2 912.5280324113199 912.52692993586 31.33 2 -0.11754496665985847 0.028291173936878376 0.9438714419765777 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 44355 19872 IMPKTGFLI True PC9_epitope_Rep3 1018.5885244928999 1018.58742993586 81.674 2 -0.11760823763557601 0.028291173936878376 0.9438714419765777 ['ENSG00000198681|ENST00000356661|MAGEA1', 'ENSG00000197172|ENST00000329342|MAGEA6'] 70746 17102 MEALPLLAA True H1975_Epitope_Rep3 927.5099398190299 927.50884993586 71.403 2 -0.1176484914377671 0.028291173936878376 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 111492 23126 TLLLLLSEA True PC9_epitope_Rep2 971.59029831471 971.58920993586 94.446 2 -0.11768370358173387 0.028291173936878376 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 139932 22571 YVGEELIYL True PC9_epitope_Rep3 1097.5644774896898 1097.5633899358602 92.088 2 -0.11768887106825003 0.028291173936878376 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000460211.5_1_2:242607386-242610957:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 2784 7480 AEVDAAMAA True NCI_RA007_Epitope_Rep5 847.3745685450299 847.37346993586 35.454 2 -0.11782878766879072 0.028329776611782213 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 130583 6022 VVAAHLAGA True PC9_epitope_Rep2 807.46028720467 807.45918993586 28.553 2 -0.11788256612387138 0.028348244875584877 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 76003 6812 NRISHGEVL True PC9_epitope_Rep3 1023.5461420869499 1023.54504993586 31.221 2 -0.11788744319969324 0.028348244875584877 0.9438714419765777 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 111667 22048 TLPDLVPQL True PC9_epitope_Rep2 994.5698972232999 994.56880993586 90.28 2 -0.11793220600960559 0.02838517706477693 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 109388 14201 TGLYTSTSV True PC9_epitope_Rep5 927.45492704071 927.45382993586 59.632 2 -0.11799138245758936 0.02838517706477693 0.9438714419765777 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 47062 18504 IVTNFLAGFEA True H1975_Epitope_Rep3 1180.61282466444 1180.61172993586 77.601 2 -0.11799836099529515 0.02838517706477693 0.9438714419765777 ['nc|ENSG00000152234|P25705-2|ATP5F1A', 'nc|ENSG00000152234|P25705-3|ATP5F1A', 'ENSG00000152234|ENST00000398752|ATP5F1A', 'ENST00000586523.1_1_18:43664250-43664349:-|nuORF'] 97316 5736 SFSTVHEKF True NCI_RA007_Epitope_Rep3 1080.5240096600398 1080.52290993586 29.541 2 -0.11804992518934256 0.02838517706477693 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 2358 16645 AEQFAVGEI True PC9_epitope_Rep1 962.4709114580198 962.4703649679301 68.854 1 -0.11810869275619043 0.02840419700884817 0.9438714419765777 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF', 'ENSG00000100749|ENST00000216639|VRK1'] 5848 8239 APGKGILAA True PC9_epitope_Rep1 796.4806882960798 796.47958993586 36.525 2 -0.11811997134847942 0.028423216208280318 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 114958 13532 TTIEAIHGL True PC9_epitope_Rep4 953.51819600361 953.51708993586 59.946 2 -0.1181865317050934 0.02843945117535378 0.9438714419765777 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67955470-67955572:-|nuORF'] 126142 13557 VPFAAPATA True PC9_epitope_Rep4 843.4490538146299 843.44850496793 60.043 1 -0.11819377112596671 0.02843945117535378 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 2247 11780 AENVPPVIP True H1975_Epitope_Rep3 934.5123823471799 934.5118349679301 50.456 1 -0.11820901045351835 0.02843945117535378 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 78050 5213 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 26.752 2 -0.11832394504635528 0.02843945117535378 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 29381 7486 FVEQHTPQL True NCI_RA007_Epitope_Rep3 1097.5505587610498 1097.54946993586 36.569 2 -0.11833442797887932 0.02843945117535378 0.9438714419765777 ['ENSG00000168878|ENST00000519937|SFTPB'] 100589 22969 SLQFIPILI True PC9_epitope_Rep2 1042.6426682407398 1042.6415699358602 93.843 2 -0.11835048172973857 0.02843945117535378 0.9438714419765777 ['ENSG00000260286|ENST00000565469|ARMH2'] 21075 10784 ERDMSNVSL True PC9_epitope_Rep5 1049.48115887189 1049.48057496793 46.472 1 -0.11835772676675596 0.028457910085530308 0.9438714419765777 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139311477-139313651:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 61544 5789 LLGGAKPGP True H1975_Epitope_Rep2 808.48068829608 808.47958993586 27.262 2 -0.1183760368705974 0.028457910085530308 0.9438714419765777 ['ENSG00000176678|ENST00000320241|FOXL1', 'FOXL1|p.G291A|1|0.34|ENSG00000176678|chr16:86579595-86579595|G/C|missense_variant'] 78986 20648 PFLDSQTGV True PC9_epitope_Rep5 962.47091145802 962.46980993586 84.476 2 -0.11840319218384279 0.028470238328180644 0.9438714419765777 ['ENSG00000133884|ENST00000528416|DPF2', 'ENST00000444314.6_1_11:65101357-65109054:+|nuORF', 'nc|ENSG00000133884|Q92785-2|DPF2', 'nc|ENSG00000205683|Q92784-4|DPF3', 'DPF3|p.G268Afs*4|1|0.42|ENSG00000205683|chr14:72674308-72674308|C/-|frameshift_variant', 'nc|ENSG00000205683|Q92784-2|DPF3', 'nc|ENSG00000205683|Q92784-5|DPF3', 'ENSG00000205683|ENST00000556509|DPF3', 'nc|ENSG00000205683|Q92784-3|DPF3', 'ENSG00000011332|ENST00000355526|DPF1', 'nc|ENSG00000011332|Q92782-1|DPF1'] 139107 10129 YSPAQSQATIY True H1975_Epitope_Rep2 1227.57716743171 1227.57606993586 43.96 2 -0.11842728795786063 0.028470238328180644 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2'] 29785 13863 FVTEGSHFVEA True PC9_epitope_Rep3 1221.56660274801 1221.56550993586 58.405 2 -0.11845595125184395 0.028470238328180644 0.9438714419765777 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 35230 5349 GSHSMRYFS True NCI_RA007_Epitope_Rep4 1070.4603638576598 1070.4592699358602 27.141 2 -0.1184662458905731 0.028470238328180644 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G'] 20516 20743 EPVTYFITF True PC9_epitope_Rep6 1115.5539128059897 1115.55280993586 92.547 2 -0.11848579685791266 0.028470238328180644 0.9438714419765777 ['ENSG00000005059|ENST00000394650|MCUB', 'ENST00000494604.1_1_4:110605598-110605826:+|nuORF'] 62650 11004 LLVSNSRLE True PC9_epitope_Rep4 1029.5818588893299 1029.5807699358602 50.104 2 -0.11849752895899814 0.028470238328180644 0.9438714419765777 ['ENST00000540707.5_2_19:19144688-19153597:+|nuORF', 'ENST00000538663.5_1_19:19144747-19153597:+|nuORF'] 123495 14824 VIGPPVVL True H1975_Epitope_Rep3 792.5109257952 792.51037496793 62.402 1 -0.11850028853943999 0.028470238328180644 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 88451 10158 QYVDFHNQL True NCI_RA007_Epitope_Rep4 1162.54072235334 1162.5396299358601 45.93 2 -0.11852027714193553 0.028470238328180644 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5', 'nc|ENSG00000134899|P28715-2|ERCC5'] 25713 15237 FFIRQNKTNSI True PC9_epitope_Rep3 1366.7357337617798 1366.73407490379 63.757 3 -0.11855111756044397 0.028470238328180644 0.9438714419765777 ['nc|ENSG00000057149|P29508-2|SERPINB3', 'ENSG00000206073|ENST00000341074|SERPINB4', 'ENSG00000057149|ENST00000283752|SERPINB3'] 71052 5275 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 25.372 2 -0.11855131868408961 0.028470238328180644 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 101554 8106 SPASSIAAA True PC9_epitope_Rep5 773.3919328613299 773.39082993586 36.118 2 -0.11864063297932227 0.028470238328180644 0.9438714419765777 ['ENST00000576370.5_1_17:53045786-53045891:-|nuORF'] 38284 18509 HFIAEHYMF True PC9_epitope_Rep5 1193.53280052193 1193.5317099358601 76.218 2 -0.11864914172128835 0.028470238328180644 0.9438714419765777 ['ENSG00000143753|ENST00000323699|DEGS1', 'ENST00000498813.1_1_1:224377853-224378832:+|nuORF'] 140376 14683 YYEKQFPEI True PC9_epitope_Rep6 1215.5811901829898 1215.58008993586 68.407 2 -0.11865283819083765 0.028470238328180644 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'NCOR2|p.Q913Rfs*51|1|0.11|ENSG00000196498|chr12:124372092-124372092|G/-|frameshift_variant', 'NCOR2|p.R986Pfs*76|1|0.24|ENSG00000196498|chr12:124362269-124362270|-/G|frameshift_variant', 'nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'nc|ENSG00000141027|O75376-3|NCOR1'] 82320 14074 PTPVTDVAL True NCI_RA007_Epitope_Rep5 911.4963979298699 911.49530993586 60.824 2 -0.11869658356309803 0.028489248048212575 0.9438714419765777 ['TCTN1|p.V76L|2|0.69|ENSG00000204852|chr12:110619841-110619841|G/C|missense_variant'] 104753 11055 STDLQDYTY True H1975_Epitope_Rep2 1104.46113461996 1104.46057496793 47.553 1 -0.11881001206863301 0.02852670710232831 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000597774.5_1_19:50270412-50303272:+|nuORF', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 34211 17863 GPITLLVQ True NCI_RA007_Epitope_Rep2 839.5116540711899 839.51110496793 74.223 1 -0.11883807274711122 0.02852670710232831 0.9438714419765777 ['nc|ENSG00000165521|Q05BV3|EML5', 'ENSG00000165521|ENST00000554922|EML5', 'ENST00000553281.5_1_14:89088194-89171927:-|nuORF', 'nc|ENSG00000165521|Q05BV3-2|EML5'] 44457 22191 INLTQISTL True PC9_epitope_Rep1 1001.5757108797301 1001.5746099358599 90.178 2 -0.11884121777043992 0.02852670710232831 0.9438714419765777 ['ENSG00000135077|ENST00000307851|HAVCR2'] 135673 6043 YEGPPDDEA True H1975_Epitope_Rep3 991.3770706428298 991.37596993586 28.258 2 -0.11885135458603112 0.028545155736421975 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 36983 14708 GVRQQLAL True PC9_epitope_Rep3 883.5239500903898 883.52284993586 61.715 2 -0.11886431977170381 0.028545155736421975 0.9438714419765777 ['nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5'] 132121 9371 VYIRGSKIRF True PC9_epitope_Rep2 1237.7295261825295 1237.72789490379 41.379 3 -0.11896261966793122 0.02856304411620855 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 130344 9002 VTVAAETVLAA True H1975_Epitope_Rep1 1043.58627556343 1043.5851699358602 39.532 2 -0.1189655444494644 0.02856304411620855 0.9438714419765777 ['ENST00000360415.7_1_7:65617938-65618154:+|nuORF'] 14470 9863 DTSNETIYY True H1975_Epitope_Rep3 1104.46113461996 1104.4600299358601 42.968 2 -0.11900659241943326 0.02856304411620855 0.9438714419765777 ['BRINP2|p.S656T|3|0.12|ENSG00000198797|chr1:177281143-177281143|G/C|missense_variant'] 77447 8656 NYNNQSSNF True PC9_epitope_Rep5 1086.4366512076201 1086.43607496793 38.239 1 -0.11905325968232662 0.028580371290518203 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 44773 10513 IPTENSMTA True PC9_epitope_Rep3 962.43789707758 962.43678993586 45.377 2 -0.11909789279206565 0.028580371290518203 0.9438714419765777 ['ENSG00000046604|ENST00000261590|DSG2'] 12149 14696 DIKDRFLLP True H1975_Epitope_Rep2 1115.63389446219 1115.63278993586 61.688 2 -0.1190988376369009 0.028580371290518203 0.9438714419765777 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2'] 94519 13998 RYIDRIHIF True PC9_epitope_Rep6 1231.68257599011 1231.68094490379 65.701 3 -0.1191231858588843 0.028580371290518203 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 9395 12597 AVVGSTQFEF True NCI_RA007_Epitope_Rep1 1083.52367530687 1083.52256993586 52.981 2 -0.11913121097507354 0.028596577017114915 0.9438714419765777 ['chr11:102374933-102377496|150|10.29|0.03|8.55|+|0|TE_info:L1PA2,L1PA2_dup3799,L1,LINE,donor,-,102369167,102374933|None,BIRC2|121', 'chr6:45020632-45062708|281|10.85|0.01|10.56|-|2|TE_info:L1PA2,L1PA2_dup1868,L1,LINE,donor,+,45062708,45068476|SUPT3H,None|72'] 2648 10779 AESWTHWAT True H1975_Epitope_Rep2 1087.47230844035 1087.47120993586 46.492 2 -0.11917249434227484 0.028596577017114915 0.9438714419765777 ['ENST00000399767.5_1_22:18226574-18257190:-|nuORF'] 2124 10927 AELRAWIA True H1975_Epitope_Rep1 928.5130510535199 928.51194993586 46.993 2 -0.11917372616792016 0.028596577017114915 0.9438714419765777 ['ENSG00000142552|ENST00000270645|RCN3'] 115516 20242 TVGPLIFL True H1975_Epitope_Rep2 858.5214904789 858.5209449679301 83.884 1 -0.11921908103883871 0.028596577017114915 0.9438714419765777 ['nc|ENSG00000188372|P21754-3|ZP3', 'ENSG00000188372|ENST00000394857|ZP3', 'ENST00000310842.8_1_7:76239320-76240795:-|nuORF'] 205 9323 AAFGGTFKKV True PC9_epitope_Rep5 1024.5705659296398 1024.56946993586 40.814 2 -0.11923874543679491 0.028596577017114915 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP'] 27326 15505 FMDPASALY True H1975_Epitope_Rep3 1013.45281886573 1013.45172993586 65.057 2 -0.11926384704754753 0.028596577017114915 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'PSMB4|p.R82Afs*23|1|0.16|ENSG00000159377|chr1:151400082-151400094|TCCGCAACATCTC/-|frameshift_variant', 'ENST00000493673.1_1_1:151372075-151372920:+|nuORF', 'ENST00000476467.1_1_1:151372063-151372664:+|nuORF', 'ENST00000495288.5_1_1:151372054-151373071:+|nuORF'] 103654 8540 SRDPGTHFSL True PC9_epitope_Rep4 1115.5359713260702 1115.5348699358601 40.328 2 -0.11933831344428338 0.0286144578313253 0.9438714419765777 ['ENSG00000178078|ENST00000594605|STAP2', 'nc|ENSG00000178078|Q9UGK3-2|STAP2'] 101567 5987 SPDGNRFATA True PC9_epitope_Rep5 1034.47812209678 1034.4770299358602 28.024 2 -0.11934798826657632 0.0286144578313253 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF', 'ENST00000515743.5_1_4:10086146-10093179:-|nuORF'] 111464 21582 TLLEQQGLI True PC9_epitope_Rep3 1013.57571087973 1013.5746099358599 88.311 2 -0.11939797937497373 0.0286144578313253 0.9438714419765777 ['ENSG00000100889|ENST00000216780|PCK2', 'ENST00000558674.5_1_14:24566116-24567637:+|nuORF', 'ENST00000561050.5_1_14:24566116-24568822:+|nuORF', 'nc|ENSG00000100889|Q16822-2|PCK2'] 45717 5828 ISLQYRSTLER True H1975_Epitope_Rep1 1364.7412130650398 1364.7395549037901 27.488 3 -0.11942689344137616 0.028630656705909963 0.9438714419765777 ['SOS1|p.E1074Kfs*32|1|0.33|ENSG00000115904|chr2:38995248-38995249|TC/-|frameshift_variant', 'ENSG00000115904|ENST00000402219|SOS1', 'ENST00000395038.6_1_2:39249904-39249949:-|nuORF'] 36810 21261 GVPQALFGV True PC9_epitope_Rep2 886.4912529797799 886.49014993586 87.241 2 -0.11943466395396596 0.028630656705909963 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 59033 4424 LGARRQQRSR True NCI_RA007_Epitope_Rep4 1226.70683367534 1226.70517490379 23.379 3 -0.11945348410723154 0.028630656705909963 0.9438714419765777 ['ENST00000564529.1_1_15:75165550-75165682:-|nuORF'] 33242 7871 GLAEVAAAV True NCI_RA007_Epitope_Rep3 799.4439684341899 799.44286993586 38.079 2 -0.1195007136012259 0.028630656705909963 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 118075 5573 VATVNVVRA True NCI_RA007_Epitope_Rep3 927.5501648382299 927.54906993586 28.913 2 -0.11954091696465463 0.028630656705909963 0.9438714419765777 ['ARHGAP36|p.S411T|1|0.48|ENSG00000147256|chrX:131086039-131086039|T/A|missense_variant'] 79469 7683 PGPPTTCPP True H1975_Epitope_Rep2 865.40038937005 865.39928993586 34.505 2 -0.11955980729892415 0.028630656705909963 0.9438714419765777 ['ENST00000417456.1_1_1:35442444-35442927:-|nuORF'] 47713 21106 IYPWVHVVI True PC9_epitope_Rep2 1124.6382515666398 1124.6371499358602 86.643 2 -0.11960337639305069 0.028648532373819348 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3'] 29786 12365 FVTEGSHFVEA True PC9_epitope_Rep4 1221.56660274801 1221.56550993586 55.368 2 -0.11962407091699558 0.028648532373819348 0.9438714419765777 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 30249 5838 GAAGGLRGV True PC9_epitope_Rep3 756.4242360491199 756.42312993586 27.522 2 -0.11962541884714507 0.028648532373819348 0.9438714419765777 ['ENST00000291442.3_1_19:17351565-17356474:-|nuORF'] 3877 10304 AHDDGRWSL True PC9_epitope_Rep1 1055.47845644995 1055.47787496793 44.519 1 -0.11964072140754234 0.02866752708357777 0.9438714419765777 ['ENSG00000075618|ENST00000382361|FSCN1'] 69849 9284 LYAEKPPRCSC True NCI_RA007_Epitope_Rep2 1265.58966377505 1265.58856993586 40.722 2 -0.11967677095677863 0.028685960109503323 0.9438714419765777 ['ENST00000493450.1_1_20:37659368-37662889:+|nuORF'] 105031 9365 STIKTLEEA True PC9_epitope_Rep5 990.5233409536999 990.52224993586 40.977 2 -0.11976153092034036 0.028685960109503323 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 126608 10274 VPPPPPPPP True PC9_epitope_Rep2 893.50108938749 893.49998993586 44.85 2 -0.11979761028272985 0.028702146795448323 0.9438714419765777 ['ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000494373.1_1_2:54014190-54014463:+|nuORF', 'ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1081Kfs*25|2|0.4|ENSG00000139734|chr13:59774745-59774746|-/T|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3', 'nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'nc|ENSG00000154380|Q8N8S7-3|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7|ENAH', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENSG00000188316|ENST00000341276|ENO4', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1'] 126607 10274 VPPPPPPPP True PC9_epitope_Rep2 893.50108938749 893.49998993586 44.85 2 -0.11979761028272985 0.028702146795448323 0.9438714419765777 ['ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000494373.1_1_2:54014190-54014463:+|nuORF', 'ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1081Kfs*25|2|0.4|ENSG00000139734|chr13:59774745-59774746|-/T|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3', 'nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'nc|ENSG00000154380|Q8N8S7-3|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7|ENAH', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENSG00000188316|ENST00000341276|ENO4', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1'] 130243 10891 VTSQLYAS True H1975_Epitope_Rep1 867.4337976733099 867.43324496793 46.854 1 -0.11980964533574649 0.028702146795448323 0.9438714419765777 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB'] 39703 7206 HPTWALKEA True PC9_epitope_Rep6 1051.5450794577898 1051.54398993586 36.806 2 -0.1198359471162911 0.028702146795448323 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 54788 12928 LAEVVAVR True PC9_epitope_Rep5 855.5178020807898 855.51670993586 54.739 2 -0.11986924746670323 0.028702146795448323 0.9438714419765777 ['ENST00000601500.1_1_5:50674700-50674763:-|nuORF'] 9182 18124 AVPDGPLQEV True PC9_epitope_Rep5 1023.52367530687 1023.5225699358599 74.724 2 -0.11989345588825544 0.028702146795448323 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.Q1049Lfs*8|1|0.14|ENSG00000120800|chr12:101327183-101327186|CCAA/-|frameshift_variant'] 129425 10418 VTEIMSM[Oxidation]GY True H1975_Epitope_Rep3 1045.44601961357 1045.44492993586 45.132 2 -0.12010057452277557 0.028720014076521534 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 101750 5718 SPHLGPAPA True PC9_epitope_Rep4 845.4395517600899 845.43844993586 28.815 2 -0.12012296423835515 0.028720014076521534 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant', 'IGF2R-SYTL3|1|fusion', 'IGF2R-SYTL3|2|fusion'] 112910 15320 TPQKLPSL True PC9_epitope_Rep4 882.5174677276199 882.51636993586 66.86 2 -0.12017976462357124 0.028720014076521534 0.9438714419765777 ['ENSG00000185009|ENST00000355264|AP3M1'] 7945 20826 ATDIFSYLVEY True H1975_Epitope_Rep3 1319.62853429823 1319.6274299358602 86.996 2 -0.1202268289134498 0.028737317459386548 0.9438714419765777 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A', 'nc|ENSG00000100796|Q6IN85-2|PPP4R3A', 'ENSG00000100796|ENST00000554943|PPP4R3A', 'ENST00000554574.1_1_14:91942052-91948315:-|nuORF', 'nc|ENSG00000100796|Q6IN85-5|PPP4R3A'] 117466 13894 VADVLTSLA True NCI_RA007_Epitope_Rep2 887.49639792987 887.4958449679301 58.698 1 -0.12024091045049931 0.028737317459386548 0.9438714419765777 ['nc|ENSG00000068137|Q7Z736-4|PLEKHH3', 'ENST00000456950.6_1_17:40821512-40828020:-|nuORF', 'nc|ENSG00000068137|Q7Z736-2|PLEKHH3', 'ENST00000591490.5_1_17:40821740-40828722:-|nuORF'] 91523 4420 RPAAQPSFHQA True PC9_epitope_Rep5 1208.6050539454 1208.60341490379 22.071 3 -0.12026250017204222 0.028737317459386548 0.9438714419765777 ['ENSG00000151929|ENST00000369085|BAG3'] 29479 12864 FVIEIQKN True H1975_Epitope_Rep3 989.5545815123298 989.55348993586 54.704 2 -0.12029838571262494 0.028737317459386548 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-3|CDCP1'] 57170 7241 LEERTPPVP True H1975_Epitope_Rep3 1036.5553097883198 1036.5542099358602 32.825 2 -0.12039962241481135 0.028751807982487002 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 12348 12064 DIWKMENEFY True H1975_Epitope_Rep2 1373.5961886241298 1373.5950899358602 51.486 2 -0.12040485961364979 0.028751807982487002 0.9438714419765777 ['ENSG00000153936|ENST00000370550|HS2ST1'] 593 5064 AASAETASVT True NCI_RA007_Epitope_Rep2 906.42944056886 906.4288949679301 24.323 1 -0.12045855062204397 0.028751807982487002 0.9438714419765777 ['nc|ENSG00000132952|Q5W0Q7-2|USPL1', 'ENSG00000132952|ENST00000255304|USPL1'] 4450 13096 AIYKRTREDVP True PC9_epitope_Rep1 1346.73064838134 1346.7295499358602 55.243 2 -0.12045935404162984 0.028751807982487002 0.9438714419765777 ['LAMC1|p.G170V|3|0.15|ENSG00000135862|chr1:183103418-183103418|G/T|missense_variant'] 34275 19817 GPLLAAAVA True PC9_epitope_Rep4 781.46978925921 781.4692449679301 84.353 1 -0.12050690903639573 0.028751807982487002 0.9438714419765777 ['ENSG00000174326|ENST00000574600|SLC16A11', 'nc|ENSG00000174326|Q8NCK7|SLC16A11'] 129831 20828 VTLGPVPEI True PC9_epitope_Rep2 923.53278343859 923.5322349679301 85.558 1 -0.12053002485521408 0.028751807982487002 0.9438714419765777 ['ENSG00000117395|ENST00000236051|EBNA1BP2', 'ENST00000472982.5_1_1:43637061-43637789:-|nuORF'] 80282 12961 PLEDYSGECFR True PC9_epitope_Rep1 1314.55505208814 1314.5533949037901 54.727 3 -0.12058022810905598 0.028751807982487002 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 33325 18841 GLDQSLVSL True PC9_epitope_Rep4 930.5022115863 930.5016649679301 80.559 1 -0.12059370120463324 0.028751807982487002 0.9438714419765777 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1'] 98141 19997 SICNGVPMV True PC9_epitope_Rep3 918.43030959934 918.42920993586 82.164 2 -0.1206354866540017 0.028751807982487002 0.9438714419765777 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'nc|ENSG00000242515|Q9HAW8-2|UGT1A10', 'nc|ENSG00000242366|Q9HAW9-2|UGT1A8', 'nc|ENSG00000241119|O60656-2|UGT1A9', 'nc|ENSG00000241635|P22309-2|UGT1A1', 'nc|ENSG00000288702|P35503-3|UGT1A3', 'nc|ENSG00000244474|P22310-2|UGT1A4', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 83748 3643 QEDHRSEEKSK True NCI_RA007_Epitope_Rep2 1371.6378701953097 1371.63622490379 18.82 3 -0.12069036729419903 0.028790336766804137 0.9438714419765777 ['ENST00000496433.5_1_2:3193107-3197993:-|nuORF', 'ENSG00000032389|ENST00000382125|EIPR1'] 100366 15146 SLNIITVTL True PC9_epitope_Rep4 972.58554728744 972.58444993586 66.186 2 -0.12069511724965414 0.02880931905245876 0.9438714419765777 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000572285.5_1_17:7132676-7132733:-|nuORF', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 98822 13963 SITSELHAV True PC9_epitope_Rep1 955.4974605590301 955.49636993586 58.545 2 -0.12071670281240228 0.028847845206684257 0.9438714419765777 ['ENSG00000004700|ENST00000444129|RECQL'] 87657 6264 QVASTLKQV True PC9_epitope_Rep2 972.5603951687598 972.55928993586 29.492 2 -0.12074540996712955 0.028865697310819262 0.9438714419765777 ['ENSG00000166295|ENST00000299381|ANAPC16'] 66089 16197 LSNNKIQAL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 67.118 2 -0.12076371570807654 0.028865697310819262 0.9438714419765777 ['ENSG00000164342|ENST00000296795|TLR3'] 116564 7491 TYFYKRKEYWK True NCI_RA007_Epitope_Rep1 1610.8245487661795 1610.8228949037903 33.13 3 -0.12080378675969254 0.028865697310819262 0.9438714419765777 ['MMP16|p.G504R|1|0.24|ENSG00000156103|chr8:88041775-88041775|C/T|missense_variant'] 82979 18877 PYDQSGFVSAI True PC9_epitope_Rep1 1182.5557037111398 1182.55460993586 77.395 2 -0.1208199928619272 0.028884676268834647 0.9438714419765777 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000595934.1_1_19:50360240-50360429:+|nuORF', 'ENST00000498792.1_1_3:120025975-120026458:+|nuORF', 'ENST00000596424.1_1_19:50360315-50362048:+|nuORF', 'nc|ENSG00000104960|Q86YD1-3|PTOV1'] 98611 12603 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.55090993586 53.527 2 -0.12083438140956368 0.028903654485049834 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 32028 11181 GEVFNELVGK True NCI_RA007_Epitope_Rep2 1090.5658744720197 1090.56476993586 48.073 2 -0.12084894923458465 0.02892206675525678 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 61210 12007 LLDPKYGMFRY True H1975_Epitope_Rep3 1401.7114931598899 1401.70984490379 51.346 3 -0.1208606054294963 0.02892206675525678 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000480158.1_1_10:69714333-69714887:-|nuORF'] 100537 17795 SLPTAPLAP True PC9_epitope_Rep1 865.49091862661 865.48982993586 73.244 2 -0.12088819370837038 0.028941043128212142 0.9438714419765777 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 125705 20813 VNEALSVLL True PC9_epitope_Rep5 956.5542471591599 956.55369496793 85.107 1 -0.12095322515280331 0.028977294931415844 0.9438714419765777 ['ENSG00000110328|ENST00000227756|GALNT18'] 114366 9217 TSDETTLEY True H1975_Epitope_Rep2 1057.44515020265 1057.4445749679298 40.407 1 -0.12100241639837882 0.028977294931415844 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 135515 13055 YEDSGIPLPA True H1975_Epitope_Rep2 1060.5076908895599 1060.50717496793 55.338 1 -0.12100493651315608 0.028977294931415844 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 5978 16806 APLAAAALPA True PC9_epitope_Rep1 864.5069030439199 864.50580993586 69.468 2 -0.12101822034338212 0.028977294931415844 0.9438714419765777 ['ENST00000366600.7_1_1:235658098-235667703:-|nuORF'] 48899 5744 KEVDWSQNTA True H1975_Epitope_Rep2 1176.5411162761602 1176.54000993586 27.092 2 -0.12103704600867549 0.028977294931415844 0.9438714419765777 ['ENSG00000100522|ENST00000216410|GNPNAT1'] 81463 15118 PQLFQSTI True NCI_RA007_Epitope_Rep5 932.4967322830399 932.49562993586 64.818 2 -0.1210576376959142 0.028994568402954165 0.9438714419765777 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 130462 16004 VTVPPGPSL True PC9_epitope_Rep4 865.49091862661 865.49037496793 69.493 1 -0.12106317434637626 0.028994568402954165 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 125981 10449 VPAGGAVAVSA True PC9_epitope_Rep1 897.4919812557699 897.4914349679301 45.08 1 -0.12107144929614538 0.028994568402954165 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 63321 19923 LPDIKVLTL True PC9_epitope_Rep1 1010.6375828603 1010.63648993586 81.452 2 -0.12107752160436418 0.028994568402954165 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G', 'ENST00000472077.1_1_2:27604468-27607956:-|nuORF'] 17035 11598 EGLVQELQKKA True NCI_RA007_Epitope_Rep3 1241.6979512707296 1241.6968499358602 52.746 2 -0.12115839234566086 0.029013539651837523 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 131862 19527 VYDPATETW True PC9_epitope_Rep1 1080.4763907612798 1080.47528993586 79.931 2 -0.1212677235952908 0.029067041725269572 0.9438714419765777 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 97643 6410 SHAQTVVL True PC9_epitope_Rep4 853.46576650793 853.46521496793 31.748 1 -0.12131966270624131 0.029067041725269572 0.9438714419765777 ['ENSG00000177954|ENST00000651669|RPS27', 'ENSG00000185088|ENST00000330964|RPS27L', 'ENST00000482846.1_1_15:63447754-63448774:-|nuORF'] 107860 4227 TASAPAKAGK True NCI_RA007_Epitope_Rep3 900.5028802926399 900.50178993586 23.295 2 -0.12133010357477576 0.029067041725269572 0.9438714419765777 ['PLCH1|p.G928Afs*15|1|0.22|ENSG00000114805|chr3:155485571-155485571|C/-|frameshift_variant'] 84287 10159 QEYPTLKVP True NCI_RA007_Epitope_Rep3 1073.57571087973 1073.57460993586 47.049 2 -0.12134815483836897 0.029067041725269572 0.9438714419765777 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'nc|ENSG00000090316|Q7L5Y9-2|MAEA', 'nc|ENSG00000090316|Q7L5Y9-4|MAEA', 'ENST00000503693.1_1_4:1283701-1322488:+|nuORF', 'nc|ENSG00000090316|Q7L5Y9-5|MAEA'] 55286 16485 LARDSLAL True PC9_epitope_Rep3 857.4970666362099 857.49596993586 68.546 2 -0.12136956228756299 0.029067041725269572 0.9438714419765777 ['SORL1|p.M2063Vfs*2|1|0.15|ENSG00000137642|chr11:121625100-121625101|AT/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF', 'SORL1|p.G687Vfs*4|1|0.3|ENSG00000137642|chr11:121549967-121549967|G/-|frameshift_variant'] 48514 12030 KEFPGFLEN True NCI_RA007_Epitope_Rep2 1079.5287606873098 1079.52766993586 51.386 2 -0.12138018971545272 0.029067041725269572 0.9438714419765777 ['ENSG00000197747|ENST00000368811|S100A10'] 63386 22325 LPFTPILAS True PC9_epitope_Rep2 957.5535188831699 957.55242993586 91.356 2 -0.1214217786934768 0.029067041725269572 0.9438714419765777 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1'] 59103 9960 LGEGASLPP True H1975_Epitope_Rep1 839.4388830537499 839.43778993586 43.249 2 -0.12143803500425134 0.029067041725269572 0.9438714419765777 ['ENST00000313401.3_1_17:30816702-30816975:+|nuORF'] 46766 14285 IVCDVPSASA True PC9_epitope_Rep3 960.45863252216 960.4580849679301 60.035 1 -0.12146113631728928 0.029067041725269572 0.9438714419765777 ['ENSG00000102158|ENST00000618282|MAGT1', 'ENST00000476168.1_1_X:77112151-77150907:-|nuORF', 'nc|ENSG00000102158|Q9H0U3-2|MAGT1'] 36469 21199 GVISGLFEL True PC9_epitope_Rep6 933.5171333744499 933.51602993586 94.39 2 -0.12152542352924434 0.029084303461207908 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 126924 10133 VPVDTGVAA True PC9_epitope_Rep5 827.4388830537498 827.43778993586 43.961 2 -0.1215725559428002 0.029084303461207908 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 57163 7070 LEERTPPVP True H1975_Epitope_Rep1 1036.5553097883198 1036.5542099358602 32.221 2 -0.12157312090512987 0.029084303461207908 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 90989 20480 RLINQVLEL True PC9_epitope_Rep5 1096.6604435632 1096.65934993586 83.815 2 -0.12161240628911209 0.029084303461207908 0.9438714419765777 ['ENSG00000153130|ENST00000608372|SCOC', 'nc|ENSG00000153130|Q9UIL1-3|SCOC', 'nc|ENSG00000153130|Q9UIL1-2|SCOC', 'nc|ENSG00000153130|Q9UIL1|SCOC'] 34482 7849 GQDGQLKGF True PC9_epitope_Rep4 948.4664947839199 948.46538993586 37.605 2 -0.12170800648381211 0.029103267769595875 0.9438714419765777 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 117107 13934 TYSEKTTLF True PC9_epitope_Rep5 1088.5389910178399 1088.5378899358602 58.618 2 -0.12179337721296549 0.029160725795425693 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 2237 11654 AENVPPVIP True H1975_Epitope_Rep1 934.5123823471799 934.5118349679301 49.817 1 -0.12180349300198497 0.029160725795425693 0.9438714419765777 ['ENSG00000070718|ENST00000396926|AP3M2', 'nc|ENSG00000070718|P53677-2|AP3M2'] 31543 7796 GEFKQPIP True NCI_RA007_Epitope_Rep4 914.4861675993398 914.48506993586 36.67 2 -0.121844745579126 0.029172280475660478 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 111665 22295 TLPDLVPQL True PC9_epitope_Rep1 994.5698972232999 994.56880993586 90.569 2 -0.12186593388467144 0.029172280475660478 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 25528 12381 FEQFKEVLP True H1975_Epitope_Rep2 1135.5913609438699 1135.59026993586 52.71 2 -0.12186763196809841 0.029172280475660478 0.9438714419765777 ['ENST00000467042.1_1_2:99182504-99185377:+|nuORF', 'nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A'] 66354 9689 LSQTEDRQLR True PC9_epitope_Rep1 1244.6473126801998 1244.64565490379 42.124 3 -0.12194298882493113 0.029172280475660478 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'ENST00000471733.5_1_3:196807912-197024075:-|nuORF', 'ENST00000485409.5_1_3:196921289-197023334:-|nuORF', 'ENST00000486877.1_1_3:197009543-197024075:-|nuORF', 'DLG1-WDR53|1|fusion'] 86301 20923 QQFQEPFVAV True PC9_epitope_Rep5 1191.59242357303 1191.5913299358601 85.537 2 -0.12196773266243006 0.029172280475660478 0.9438714419765777 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67958045-67971691:-|nuORF'] 44598 10222 IPGTGFTVDA True PC9_epitope_Rep3 976.4865615221598 976.48546993586 44.269 2 -0.12199530677874548 0.029172280475660478 0.9438714419765777 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 37520 18545 GYISSAFLF True NCI_RA007_Epitope_Rep3 1003.5014833103099 1003.50097496793 81.147 1 -0.12203898301827132 0.029172280475660478 0.9438714419765777 ['nc|ENSG00000131471|Q16853-2|AOC3', 'ENSG00000131471|ENST00000308423|AOC3'] 86941 6021 QRSQTQTIL True PC9_epitope_Rep4 1073.58292151849 1073.58182993586 30.14 2 -0.12207235937319948 0.029172280475660478 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1'] 157 13064 AADPVSPLL True NCI_RA007_Epitope_Rep3 881.4858332461699 881.48472993586 58.667 2 -0.12207316026070231 0.029172280475660478 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 98630 20147 SIPEGALVAV True PC9_epitope_Rep1 954.5385970950199 954.5380449679301 82.325 1 -0.12208330089383243 0.029172280475660478 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant'] 17303 9472 EHDPHVLLA True PC9_epitope_Rep5 1029.5243440132099 1029.5232499358601 41.391 2 -0.12214285919804528 0.029172280475660478 0.9438714419765777 ['nc|ENSG00000101161|O94906-2|PRPF6', 'ENSG00000101161|ENST00000266079|PRPF6'] 5740 5260 APDEKYVAA True PC9_epitope_Rep4 962.4709114580199 962.46980993586 26.933 2 -0.12215224826063398 0.029172280475660478 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 79113 16111 PFYRGERITF True PC9_epitope_Rep1 1284.6615061923596 1284.65986490379 66.788 3 -0.12216151821842099 0.029172280475660478 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 16637 8079 EESPPGLTA True H1975_Epitope_Rep3 899.4236269124299 899.42252993586 36.05 2 -0.12219575573550766 0.029172280475660478 0.9438714419765777 ['ENST00000280098.8_1_2:139259536-139307756:+|nuORF'] 47710 16069 IYPWVHVVI True NCI_RA007_Epitope_Rep4 1124.6382515666398 1124.6371499358602 69.699 2 -0.12221753688885247 0.029191236771195377 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3'] 18754 12099 ELDPNNAVYY True H1975_Epitope_Rep1 1196.53496826656 1196.53437496793 51.552 1 -0.12229235702051158 0.029247530165176304 0.9438714419765777 ['ENSG00000197860|ENST00000381007|SGTB'] 63898 19082 LPVRLPLA True PC9_epitope_Rep3 877.5749230340899 877.57382993586 78.623 2 -0.12229970371987428 0.029247530165176304 0.9438714419765777 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 102554 12198 SQANIAQVL True NCI_RA007_Epitope_Rep2 942.5134449763399 942.51234993586 52.045 2 -0.12231504568734809 0.029247530165176304 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 83120 19390 PYPPPPPEF True PC9_epitope_Rep1 1039.5014833103098 1039.50038993586 79.395 2 -0.1223254075113929 0.029247530165176304 0.9438714419765777 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 43162 12943 IGRSSELAV True PC9_epitope_Rep4 930.5134449763399 930.51234993586 57.672 2 -0.12235001015885504 0.029266483141021888 0.9438714419765777 ['ENSG00000226763|ENST00000417606|SRRM5'] 34965 16328 GQYFGELAL True NCI_RA007_Epitope_Rep4 996.4916469025998 996.49054993586 70.803 2 -0.12241273282295431 0.02930324268395057 0.9438714419765777 ['nc|ENSG00000114302|P13861-2|PRKAR2A', 'ENSG00000114302|ENST00000265563|PRKAR2A', 'ENSG00000005249|ENST00000265717|PRKAR2B'] 23782 11434 EYKNTNEMF True PC9_epitope_Rep3 1174.49647458286 1174.49536993586 48.979 2 -0.12242210882112518 0.02930324268395057 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 96063 5577 SEARDVFEKA True NCI_RA007_Epitope_Rep4 1150.56185172074 1150.56019490379 28.052 3 -0.12242720596533214 0.02930324268395057 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 70860 5424 MEGKVPVAA True H1975_Epitope_Rep2 900.4738886634798 900.47278993586 25.89 2 -0.12246861174737884 0.02930324268395057 0.9438714419765777 ['ENST00000265260.7_1_3:101298672-101298792:+|nuORF'] 60089 7600 LHSSPGASL True PC9_epitope_Rep3 867.44503106335 867.44392993586 34.232 2 -0.12258223504738328 0.02936009057900285 0.9438714419765777 ['ENST00000571846.5_2_17:7762991-7763075:+|nuORF'] 102099 7411 SPPVPGPSA True PC9_epitope_Rep6 807.41266830591 807.41156993586 37.727 2 -0.12258361824619471 0.02936009057900285 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 110925 20212 TLASNAIILI True PC9_epitope_Rep1 1027.62774645259 1027.62664993586 82.574 2 -0.12258406229336904 0.02936009057900285 0.9438714419765777 ['nc|ENSG00000249730|P0C629|OR10J4'] 6512 2552 APTTAATTAA True PC9_epitope_Rep4 874.43961132974 874.43850993586 14.727 2 -0.12278650998997492 0.029396837790357212 0.9438714419765777 ['ENSG00000140319|ENST00000267884|SRP14'] 106276 9414 SVQQLRCTEAK True NCI_RA007_Epitope_Rep1 1261.64487015205 1261.64376993586 40.612 2 -0.12281646531126722 0.029396837790357212 0.9438714419765777 ['nc|ENSG00000151422|P16591-2|FER', 'ENSG00000151422|ENST00000281092|FER'] 101983 11458 SPNGQFVAP True PC9_epitope_Rep4 915.4450310633499 915.44392993586 51.837 2 -0.1228382980651481 0.029396837790357212 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 4466 8955 AKFGSNINL True NCI_RA007_Epitope_Rep3 962.5185303567799 962.51742993586 42.318 2 -0.12291247443339323 0.029396837790357212 0.9438714419765777 ['ENSG00000101132|ENST00000371419|PFDN4', 'ENST00000487129.1_1_20:52825073-52835686:+|nuORF'] 96555 12286 SELPIVTPA True H1975_Epitope_Rep1 925.51204799401 925.51149496793 52.282 1 -0.12295522112298804 0.029413486874207084 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 130925 17456 VVIGAVVAA True PC9_epitope_Rep1 797.50108938749 797.49998993586 71.942 2 -0.12295972818850302 0.029413486874207084 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.A319E|1|0.28|ENSG00000234745|chr6:31355163-31355163|G/T|missense_variant'] 69050 18561 LVIFQVTGI True PC9_epitope_Rep5 988.5957180483199 988.59462993586 76.42 2 -0.12303065632473074 0.029413486874207084 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2'] 3746 5637 AGTAGGAEVAP True H1975_Epitope_Rep2 899.4348603024699 899.43376993586 26.682 2 -0.12306320007678495 0.029413486874207084 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 5924 13150 APHPPLSVV True PC9_epitope_Rep3 915.51780208079 915.51670993586 55.612 2 -0.12306875356507482 0.029413486874207084 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 46553 9227 ITRARFEEL True PC9_epitope_Rep2 1133.61930702721 1133.61766490379 40.832 3 -0.12316158696608151 0.029451373031207918 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532091.1_1_11:122929724-122930952:-|nuORF', 'ENSG00000126803|ENST00000247207|HSPA2', 'HSPA2|p.T298A|1|0.1|ENSG00000126803|chr14:64541741-64541741|A/G|missense_variant', 'HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 64112 5392 LQEELSQAKC True NCI_RA007_Epitope_Rep2 1147.55432381215 1147.5532299358601 25.593 2 -0.12321609348053077 0.029451373031207918 0.9438714419765777 ['ENSG00000163820|ENST00000296137|FYCO1', 'nc|ENSG00000163820|Q9BQS8-4|FYCO1'] 112980 13808 TPSPIISP True PC9_epitope_Rep6 810.4487194614601 810.4481749679301 64.916 1 -0.1232462213722792 0.029470315000585504 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17'] 108271 5769 TEAREAALP True H1975_Epitope_Rep2 956.4927095317598 956.49160993586 27.185 2 -0.12337318505594096 0.029504741833508957 0.9438714419765777 ['ENST00000314845.7_1_11:46418495-46418936:-|nuORF'] 109009 3182 TEVSKTPEA True H1975_Epitope_Rep3 960.47639076128 960.47528993586 16.846 2 -0.12342172080327152 0.029504741833508957 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2', 'MAGED2|p.R76W|1|0.36|ENSG00000102316|chrX:54809902-54809902|C/T|missense_variant'] 45900 6391 ISRERAVELL True NCI_RA007_Epitope_Rep3 1184.6877209401998 1184.68606490379 32.143 3 -0.12342988134792461 0.029504741833508957 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 113127 11163 TQAPGNPVL True PC9_epitope_Rep4 895.4763311916299 895.47578496793 50.718 1 -0.12345958968357583 0.029504741833508957 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF'] 26102 8020 FHEPSQEL True PC9_epitope_Rep6 985.4505103666098 985.44940993586 40.324 2 -0.12346916195306411 0.029504741833508957 0.9438714419765777 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106', 'nc|ENSG00000103994|Q9H2Y7-2|ZNF106'] 5213 19469 ALPTVLVGV True PC9_epitope_Rep6 867.5429541994698 867.54184993586 87.551 2 -0.12347512487361438 0.029504741833508957 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 5714 7211 APASLTSA True PC9_epitope_Rep5 716.3704691407601 716.36992496793 32.701 1 -0.123477195670942 0.029504741833508957 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 117464 16245 VADVLGTAL True PC9_epitope_Rep1 857.48583324617 857.48472993586 67.305 2 -0.12348209511077474 0.029504741833508957 0.9438714419765777 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 124800 6791 VLLGETGK True PC9_epitope_Rep1 815.47526856247 815.47416993586 30.927 2 -0.1236235221836826 0.029560975609756096 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 39712 13864 HPVHPFLAV True PC9_epitope_Rep1 1015.56033559911 1015.55922993586 58.168 2 -0.12362667131749615 0.029560975609756096 0.9438714419765777 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000566052.1_1_16:1652334-1657279:-|nuORF'] 34905 7039 GQVTEAVKV True PC9_epitope_Rep4 929.5181960036099 929.51708993586 34.328 2 -0.12367690433500116 0.029560975609756096 0.9438714419765777 ['ENSG00000085662|ENST00000285930|AKR1B1', 'ENST00000498771.5_1_7:134132683-134136556:-|nuORF', 'ENST00000489022.5_1_7:134133851-134143844:-|nuORF', 'ENST00000484592.5_1_7:134134339-134143844:-|nuORF'] 70242 10320 LYMKNGQGF True PC9_epitope_Rep2 1056.5062514209196 1056.5051499358601 45.024 2 -0.12370094914420054 0.029560975609756096 0.9438714419765777 ['nc|ENSG00000127314|P61224-4|RAP1B', 'ENST00000494982.1_1_1:112233982-112249293:+|nuORF', 'nc|ENSG00000127314|P61224-3|RAP1B', 'nc|ENSG00000254893|A6NIZ1|RAP1BL', 'ENSG00000127314|ENST00000250559|RAP1B', 'ENSG00000116473|ENST00000369709|RAP1A'] 56141 6518 LDMEHNNSGP True H1975_Epitope_Rep3 1112.45567240004 1112.45456993586 30.042 2 -0.12376486481134934 0.029578756365481046 0.9438714419765777 ['ENST00000545914.5_1_12:13132494-13132551:+|nuORF'] 4071 18813 AHSDTLFTI True PC9_epitope_Rep1 1003.4974605590301 1003.49636993586 77.151 2 -0.12378396668493215 0.029578756365481046 0.9438714419765777 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 131885 13996 VYDTVFKHF True PC9_epitope_Rep4 1154.5760452328998 1154.5744049037899 61.743 3 -0.12379198643725231 0.029578756365481046 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 77578 18989 NYSPYVNYF True PC9_epitope_Rep6 1165.50802524273 1165.50747496793 85.684 1 -0.1238940570462058 0.02959653503980022 0.9438714419765777 ['ENSG00000156162|ENST00000414645|DPY19L4'] 57350 5336 LEHERQGR True NCI_RA007_Epitope_Rep2 1023.52098996827 1023.5198899358601 25.375 2 -0.12391787644884691 0.02959653503980022 0.9438714419765777 ['ENSG00000105321|ENST00000221922|CCDC9', 'chr19:47272161-47273357|501|41.19|0.0|21.97|+|ENST00000643617|CCDC9,CCDC9'] 140114 22262 YVPPELITL True PC9_epitope_Rep5 1043.59029831471 1043.58920993586 90.638 2 -0.1239215815568783 0.02959653503980022 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 111134 9882 TLEQEIER True PC9_epitope_Rep1 1016.5138388991599 1016.51274993586 42.868 2 -0.12404166282213352 0.02963208614568296 0.9438714419765777 ['ENST00000560301.5_1_15:41067690-41071423:-|nuORF', 'ENST00000559238.5_1_15:41060140-41072106:-|nuORF', 'ENSG00000104129|ENST00000220496|DNAJC17'] 107205 22819 SYPDLLPTF True PC9_epitope_Rep3 1051.52261267771 1051.52207496793 93.043 1 -0.12404384494661867 0.02963208614568296 0.9438714419765777 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 105266 15983 STTGMLTGV True PC9_epitope_Rep3 865.42151873745 865.4209649679301 66.624 1 -0.12404879889198175 0.02963208614568296 0.9438714419765777 ['ENSG00000066084|ENST00000301180|DIP2B'] 44200 21432 ILSDLELYL True H1975_Epitope_Rep2 1077.59577761797 1077.59527496793 88.674 1 -0.12411111937220883 0.02963208614568296 0.9438714419765777 ['ENST00000437184.5_1_2:33683166-33740095:+|nuORF', 'ENST00000425210.5_1_2:33718199-33740095:+|nuORF', 'ENST00000402538.7_1_2:33672919-33740095:+|nuORF'] 44215 7021 ILSGVVTK True PC9_epitope_Rep4 815.51165407119 815.51054993586 34.256 2 -0.12420992566224996 0.02963208614568296 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'RPS11|p.G70R|1|0.34|ENSG00000142534|chr19:49497580-49497580|G/A|missense_variant'] 97671 8778 SHDFYSHEL True PC9_epitope_Rep4 1133.4777877436102 1133.47615490379 41.277 3 -0.12421067377444 0.02963208614568296 0.9438714419765777 ['ENSG00000095015|ENST00000399503|MAP3K1', 'MAP3K1|p.T946Kfs*22|1|0.62|ENSG00000095015|chr5:56882037-56882037|C/-|frameshift_variant', 'MAP3K1|p.T947Nfs*56|1|0.61|ENSG00000095015|chr5:56882039-56882040|AC/-|frameshift_variant'] 70038 13162 LYGRHFNYL True PC9_epitope_Rep2 1181.59817765981 1181.59654490379 55.9 3 -0.12429531805491137 0.02965043695380774 0.9438714419765777 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 17037 18586 EGLVQELQKKA True PC9_epitope_Rep3 1241.6979512707296 1241.6968499358602 76.716 2 -0.12432890420928537 0.02965043695380774 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000468312.1_1_17:40370167-40384145:-|nuORF'] 38292 19229 HFLDRHLVF True PC9_epitope_Rep3 1182.62981214126 1182.6281549037901 79.184 3 -0.1243988715398217 0.029705480787985176 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF', 'ENST00000519030.5_1_8:109252301-109260916:-|nuORF'] 76952 20946 NVPEGLLATV True PC9_epitope_Rep2 1011.56006081559 1011.5594749679301 86.017 1 -0.12440313883296958 0.029705480787985176 0.9438714419765777 ['nc|ENSG00000163399|P05023-3|ATP1A1', 'nc|ENSG00000163399|P05023-4|ATP1A1', 'ENSG00000163399|ENST00000295598|ATP1A1', 'nc|ENSG00000163399|P05023-2|ATP1A1', 'ENSG00000018625|ENST00000361216|ATP1A2', 'ENST00000472488.5_1_1:160085570-160106822:+|nuORF', 'ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 131619 18195 VVYQDGFYGA True PC9_epitope_Rep5 1117.50802524273 1117.5069299358602 74.996 2 -0.1244531852149348 0.029705480787985176 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 5734 6232 APDEKYVAA True PC9_epitope_Rep1 962.4709114580199 962.46980993586 28.784 2 -0.12446266809416233 0.029705480787985176 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 101841 18201 SPISSLYQA True PC9_epitope_Rep5 964.4865615221601 964.48546993586 75.021 2 -0.12446746777995278 0.029705480787985176 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-3|DYNC2H1'] 84543 10227 QHAEVYYKL True PC9_epitope_Rep5 1149.58185888933 1149.58021490379 44.327 3 -0.1245097416243757 0.029705480787985176 0.9438714419765777 ['ENSG00000102390|ENST00000373358|PBDC1'] 70437 16642 LYRLKFNEF True PC9_epitope_Rep4 1228.6604435632 1228.65934993586 71.98 2 -0.12457648697895632 0.029723825869870494 0.9438714419765777 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 5866 15655 APGNPVLAV True PC9_epitope_Rep4 836.4756029156399 836.4750549679301 68.144 1 -0.12458172262883814 0.029723825869870494 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2', 'ENST00000587275.1_1_19:56173897-56175127:+|nuORF', 'U2AF2|p.Q190L|1|0.15|ENSG00000063244|chr19:55662584-55662584|A/T|missense_variant'] 40918 13750 HVVDVSVAV True PC9_epitope_Rep5 923.5076313199099 923.50652993586 57.911 2 -0.12462938665565658 0.029758190327613104 0.9438714419765777 ['ENST00000533297.1_1_11:111896132-111933256:+|nuORF', 'ENSG00000150768|ENST00000280346|DLAT'] 110066 7780 TIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1005.4437110134398 1005.4431749679301 34.879 1 -0.12466342769584426 0.029758190327613104 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 15989 17465 EDYLSLILNR True NCI_RA007_Epitope_Rep2 1234.65575210558 1234.65464993586 72.668 2 -0.12466674544515853 0.029758190327613104 0.9438714419765777 ['CON__P02769'] 140305 15736 YYDPKHVIF True PC9_epitope_Rep3 1180.59169529704 1180.5900449037902 65.689 3 -0.12468386400358589 0.029758190327613104 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 6206 13137 APRAALVFA True PC9_epitope_Rep4 914.5337864980999 914.53268993586 58.426 2 -0.12471890944409604 0.029758190327613104 0.9438714419765777 ['ENSG00000170006|ENST00000304385|TMEM154'] 47552 20555 IYLWEFLL True PC9_epitope_Rep6 1095.60046907559 1095.59936993586 91.792 2 -0.12476246424837634 0.029758190327613104 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1', 'ENST00000445099.2_1_9:90431423-90431870:+|nuORF', 'ENSG00000102034|ENST00000308167|ELF4'] 9660 16883 AYGNVFSAF True NCI_RA007_Epitope_Rep5 974.4497820906199 974.44923496793 71.697 1 -0.12478161462102656 0.029758190327613104 0.9438714419765777 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 99659 16988 SLGAGFDSL True PC9_epitope_Rep3 865.41814760917 865.41704993586 70.505 2 -0.12479714082686198 0.029758190327613104 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant'] 4259 22020 AIIGGMFTV True PC9_epitope_Rep2 907.48372507119 907.48262993586 90.171 2 -0.12482720201928689 0.029774787949692894 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 74966 12054 NLVMTPQG True PC9_epitope_Rep1 858.4269384710599 858.4263849679301 51.224 1 -0.12483483267022062 0.029774787949692894 0.9438714419765777 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 72005 21006 MQFGELLAA True PC9_epitope_Rep4 978.4844533471799 978.48334993586 88.96 2 -0.12487016839845846 0.029774787949692894 0.9438714419765777 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16', 'nc|ENSG00000291110|Q309B1-2|TRIM16L'] 90557 14379 RKFWAGIVF True NCI_RA007_Epitope_Rep2 1122.6338348925399 1122.6327299358602 60.598 2 -0.12493298642260788 0.029774787949692894 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1'] 140771 20888 YYRPRFFLL True PC9_epitope_Rep5 1273.6971634250897 1273.69552490379 85.399 3 -0.124956230633539 0.029774787949692894 0.9438714419765777 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'ENST00000586588.5_1_19:10244345-10254710:-|nuORF'] 38118 6444 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 33.414 2 -0.12496946063282294 0.029793705884646884 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 110705 6656 TKASIKDVL True NCI_RA007_Epitope_Rep4 973.5807962601699 973.57968993586 32.224 2 -0.12502218534410606 0.02981146054709587 0.9438714419765777 ['ENSG00000273820|ENST00000621775|USP27X', 'ENSG00000124422|ENST00000261497|USP22', 'nc|ENSG00000124422|Q9UPT9-2|USP22'] 108737 5936 TEMVFRRQEMV True H1975_Epitope_Rep1 1424.69044044548 1424.68879490379 27.904 3 -0.1250592368404387 0.02981146054709587 0.9438714419765777 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES', 'ENST00000496379.5_1_15:91433070-91435551:+|nuORF', 'ENST00000462476.1_1_15:91433079-91433715:+|nuORF'] 3748 5801 AGTAGGAEVAP True H1975_Epitope_Rep3 899.4348603024699 899.43376993586 27.337 2 -0.12519519550000224 0.02981146054709587 0.9438714419765777 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 1417 6628 AEEGPGVPAA True H1975_Epitope_Rep3 896.4239612655998 896.4234149679301 30.447 1 -0.12523632382530786 0.029829213132652264 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 125012 12056 VLNWQDCEVP True PC9_epitope_Rep1 1201.54375912845 1201.5426699358602 51.232 2 -0.1252428275662708 0.029829213132652264 0.9438714419765777 ['nc|ENSG00000157368|Q6ZMJ4-2|IL34', 'ENSG00000157368|ENST00000288098|IL34'] 91987 18659 RPRKAFLLLL True PC9_epitope_Rep2 1225.8022971999699 1225.80064490379 77.136 3 -0.12525680870056996 0.029829213132652264 0.9438714419765777 ['ENSG00000155660|ENST00000652332|PDIA4'] 9233 8706 AVQFCWNHYK True NCI_RA007_Epitope_Rep1 1294.59171238038 1294.5906099358601 37.867 2 -0.1253320696223312 0.029867040979451788 0.9438714419765777 ['ENSG00000131477|ENST00000253796|RAMP2', 'nc|ENSG00000131477|O60895-2|RAMP2'] 74727 22513 NLLDLLTEV True PC9_epitope_Rep6 1028.57537652656 1028.57426993586 99.6 2 -0.1254125990504176 0.029867040979451788 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000556704.1_1_15:91486092-91490047:+|nuORF'] 103496 10744 SRCDMDGATL True PC9_epitope_Rep5 1067.43757980775 1067.4364899358602 46.318 2 -0.12553776558058743 0.02988420601193029 0.9438714419765777 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000495848.1_1_1:201979803-201981353:+|nuORF', 'ENST00000490203.5_1_1:201979803-201981353:+|nuORF'] 39591 9602 HPKYSDMIVA True PC9_epitope_Rep4 1159.56957995347 1159.56848993586 44.559 2 -0.1255566901796019 0.02988420601193029 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 95636 5480 SAVLQDSSP True NCI_RA007_Epitope_Rep2 902.4345259493 902.43342993586 25.933 2 -0.1256145153510792 0.02988420601193029 0.9438714419765777 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'nc|ENSG00000179532|Q96M86-4|DNHD1'] 160 13509 AADPVSPLL True NCI_RA007_Epitope_Rep4 881.4858332461699 881.48472993586 59.17 2 -0.12566272066996553 0.02988420601193029 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 28044 17926 FRDAFTQEL True PC9_epitope_Rep3 1125.54547338061 1125.54436993586 74.157 2 -0.1257947846566265 0.02994210413458352 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 111889 7947 TLRRKIEEEWK True H1975_Epitope_Rep3 1486.82561139534 1486.82395490379 35.537 3 -0.125843474427787 0.02997933803750341 0.9438714419765777 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 77624 11665 NYVKKFQSF True PC9_epitope_Rep5 1159.6025943339098 1159.60093490379 49.865 3 -0.1258632728972777 0.02997933803750341 0.9438714419765777 ['ENSG00000109536|ENST00000226798|FRG1', 'ENST00000278882.8_1_20:29623179-29633907:+|nuORF'] 27940 19546 FQPPPGVNI True PC9_epitope_Rep2 967.5127167003499 967.51160993586 80.567 2 -0.12586660620254828 0.02997933803750341 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 109739 8302 THGPPVQL True PC9_epitope_Rep4 847.45520182423 847.45410993586 39.392 2 -0.12596790838428232 0.030016567586005263 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 57169 7143 LEERTPPVP True H1975_Epitope_Rep3 1036.5553097883198 1036.5542099358602 32.448 2 -0.1259836232897261 0.030016567586005263 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 99445 8137 SLEKDRERWRK True NCI_RA007_Epitope_Rep5 1501.8113583135298 1501.8097049037901 37.982 3 -0.12599595942792616 0.030016567586005263 0.9438714419765777 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA', 'MGA|p.L2495Sfs*11|1|0.15|ENSG00000174197|chr15:41761821-41761822|-/A|frameshift_variant', 'ENST00000566288.1_1_15:42040980-42042834:+|nuORF'] 30497 7229 GAGTRLADAL True PC9_epitope_Rep4 943.5086939490698 943.50758993586 35.111 2 -0.12614765314713755 0.030052621321379848 0.9438714419765777 ['ENST00000302538.9_1_17:907871-908078:-|nuORF'] 6558 14279 APVPGIPTA True PC9_epitope_Rep6 821.46470387877 821.46360993586 66.816 2 -0.12618167162020819 0.030052621321379848 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 58166 17054 LESIISGAAL True PC9_epitope_Rep5 972.54916177872 972.54806993586 70.617 2 -0.12618720884956106 0.030052621321379848 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'CTNNA1|p.L776Pfs*102|1|0.11|ENSG00000044115|chr5:138932603-138932604|-/C|frameshift_variant', 'ENST00000522730.1_1_5:138160461-138163428:+|nuORF', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'CTNNA2|p.D319Tfs*32|1|0.27|ENSG00000066032|chr2:79909694-79909694|C/-|frameshift_variant'] 84961 7584 QIC[Carbamidomethyl]MDGALDP True H1975_Epitope_Rep2 1118.4736312427299 1118.4725299358602 34.124 2 -0.12618939228085305 0.030052621321379848 0.9438714419765777 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'ENST00000374161.7_3_10:50011336-50031259:+|nuORF'] 116816 15905 TYLTSIPSL True NCI_RA007_Epitope_Rep4 993.53826274185 993.53716993586 69.05 2 -0.12624649823608156 0.030052621321379848 0.9438714419765777 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L'] 101004 13368 SLTEKYFSV True PC9_epitope_Rep2 1072.54407639828 1072.5429699358601 56.697 2 -0.12632065447282856 0.030091013622809925 0.9438714419765777 ['ENST00000578492.5_1_17:62746826-62750158:-|nuORF'] 109588 10141 THDDSHLVSL True PC9_epitope_Rep5 1122.5305515924601 1122.5289149037899 43.992 3 -0.1263528280737776 0.030106395416812815 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 20639 15278 EQFSFVEY True H1975_Epitope_Rep2 1047.45492704071 1047.45382993586 63.925 2 -0.12642258014670674 0.030106395416812815 0.9438714419765777 ['ENSG00000189319|ENST00000337318|FAM53B', 'nc|ENSG00000189319|Q14153-2|FAM53B', 'ENST00000494792.1_1_10:126307332-126395327:-|nuORF'] 81734 13326 PSAPVPLAS True PC9_epitope_Rep3 837.45961849833 837.45852993586 56.291 2 -0.12644511703991562 0.030106395416812815 0.9438714419765777 ['nc|ENSG00000187821|A6NFD8-4|HELT', 'ENSG00000187821|ENST00000515777|HELT'] 64601 12426 LREERAYIL True PC9_epitope_Rep5 1161.6506071554898 1161.6495099358601 52.796 2 -0.12646035381919765 0.030106395416812815 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 138034 4631 YQDPHSTAV True PC9_epitope_Rep2 1016.45632402304 1016.45522993586 23.183 2 -0.12650780984333818 0.030106395416812815 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 85948 4971 QPATATAATAA True PC9_epitope_Rep1 972.4876241513199 972.48652993586 23.98 2 -0.1265326468771065 0.030106395416812815 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 113799 8351 TRDSNIIRL True PC9_epitope_Rep6 1086.61455599994 1086.6134499358602 41.774 2 -0.12656071648914194 0.030106395416812815 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS'] 44600 8252 IPGTGFTVDA True PC9_epitope_Rep6 976.4865615221598 976.48546993586 41.334 2 -0.12669704486924388 0.030239853476998618 0.9438714419765777 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 72000 22759 MQDPMEIFV True PC9_epitope_Rep2 1108.49330377872 1108.49220993586 93.035 2 -0.1267512332450976 0.030239853476998618 0.9438714419765777 ['ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF'] 140668 14244 YYPSTPGRYSI True PC9_epitope_Rep2 1302.6244519773 1302.6238749679299 60.057 1 -0.1268310709794653 0.030239853476998618 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 81301 5777 PPQPPPPPP True NCI_RA007_Epitope_Rep3 922.4912529797799 922.49014993586 29.704 2 -0.12684983715175988 0.030239853476998618 0.9438714419765777 ['HOXD3|p.Q115K|1|0.11|ENSG00000128652|chr2:176169457-176169457|C/A|missense_variant', 'ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000168066|Q15637-5|SF1', 'MARCHF11|p.R187Dfs*15|1|0.2|ENSG00000183654|chr5:16177860-16177860|G/-|frameshift_variant', 'ENSG00000183654|ENST00000332432|MARCHF11', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'ENSG00000165556|ENST00000381020|CDX2', 'nc|ENSG00000288658|A0A7I2V3R4|RNF228', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000128652|ENST00000683222|HOXD3', 'DGKD-ATG16L1|2|fusion', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 95377 19125 SAIETLVTA True PC9_epitope_Rep1 903.49131254943 903.49020993586 78.354 2 -0.12685244488118902 0.030239853476998618 0.9438714419765777 ['nc|ENSG00000111605|Q16630-3|CPSF6', 'ENSG00000111605|ENST00000435070|CPSF6', 'nc|ENSG00000111605|Q16630-2|CPSF6'] 71774 7655 [Acetylation]-M[Oxidation]NGPEDLPK True H1975_Epitope_Rep3 1057.4750115590298 1057.4744749679298 34.428 1 -0.1269199421747988 0.030315428526896174 0.9438714419765777 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF', 'nc|ENSG00000198431|Q16881-4|TXNRD1', 'nc|ENSG00000198431|Q16881-3|TXNRD1', 'ENST00000525566.5_2_12:104609571-104742190:+|nuORF', 'ENSG00000198431|ENST00000525566|TXNRD1', 'nc|ENSG00000198431|Q16881-5|TXNRD1', 'nc|ENSG00000198431|Q16881-2|TXNRD1', 'ENST00000526691.5_1_12:104680955-104742190:+|nuORF', 'ENST00000526390.5_1_12:104683270-104742190:+|nuORF', 'ENST00000524698.5_2_12:104681148-104742190:+|nuORF', 'TXNRD1-LAMTOR3|1|fusion', 'TXNRD1|p.V276Mfs*88|1|0.48|ENSG00000198431|chr12:104319008-104319011|GTCT/-|frameshift_variant', 'TXNRD1-LAMTOR3|3|fusion', 'TXNRD1|p.C214Lfs*4|1|0.52|ENSG00000198431|chr12:104315801-104315802|-/G|frameshift_variant', 'TXNRD1-LAMTOR3|2|fusion'] 13124 15291 DLSLFSYDD True H1975_Epitope_Rep2 1073.45532096353 1073.45477496793 63.975 1 -0.12692450916300374 0.030315428526896174 0.9438714419765777 ['nc|ENSG00000173867|Q7L5Y6-2|DET1', 'ENSG00000140543|ENST00000268148|DET1'] 61344 9692 LLEGEEERLR True PC9_epitope_Rep5 1242.6568147347398 1242.65515490379 42.248 3 -0.126930118665328 0.030315428526896174 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 43483 7493 IHVPPTTENKP True NCI_RA007_Epitope_Rep4 1231.65608645875 1231.6544549037899 35.468 3 -0.12693609975469705 0.030315428526896174 0.9438714419765777 ['ENSG00000103769|ENST00000261890|RAB11A'] 100402 14411 SLNRYFIKV True PC9_epitope_Rep2 1138.6498788795 1138.6482449037899 60.699 3 -0.1269667857750677 0.030334320448877804 0.9438714419765777 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENSG00000141568|ENST00000335255|FOXK2', 'nc|ENSG00000141568|Q01167-2|FOXK2'] 118983 11650 VEFECLALGDP True H1975_Epitope_Rep2 1191.5481758025498 1191.54706993586 49.881 2 -0.12711925150986214 0.030352620300019482 0.9438714419765777 ['ENSG00000142798|ENST00000374695|HSPG2'] 42353 8955 IELSSEEIREA True H1975_Epitope_Rep1 1274.6354105838202 1274.63430993586 39.35 2 -0.1271216437388568 0.030352620300019482 0.9438714419765777 ['ANK3|p.F1992L|1|0.14|ENSG00000151150|chr10:60074907-60074907|A/G|missense_variant'] 15026 6078 EAAAAVALG True H1975_Epitope_Rep1 771.41266830591 771.41156993586 28.446 2 -0.1271904516958336 0.030389807726024193 0.9438714419765777 ['ENSG00000146216|ENST00000259750|TTBK1', 'TTBK1|p.E935Rfs*54|1|0.18|ENSG00000146216|chr6:43283542-43283542|G/-|frameshift_variant'] 76118 15725 NRPLIYLGL True PC9_epitope_Rep4 1057.62841515893 1057.62730993586 68.411 2 -0.12724539638178087 0.030389807726024193 0.9438714419765777 ['ENST00000485596.5_1_15:85634092-85681131:+|nuORF', 'nc|ENSG00000073417|O60658-6|PDE8A', 'nc|ENSG00000073417|O60658-2|PDE8A', 'ENSG00000073417|ENST00000394553|PDE8A'] 94904 9902 RYPDRITLI True NCI_RA007_Epitope_Rep5 1145.65569253593 1145.65405490379 44.732 3 -0.12724851852486754 0.030389807726024193 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 14252 2754 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 15.4 2 -0.12730401324885537 0.0304281762574512 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 106090 6048 SVMRPEQIMK True NCI_RA007_Epitope_Rep3 1217.6260492837698 1217.62441490379 30.769 3 -0.12741931582831023 0.030466543294048895 0.9438714419765777 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 34536 4855 GQENLKTDL True PC9_epitope_Rep4 1016.51383889916 1016.51274993586 25.263 2 -0.1274714846037232 0.030481273007031143 0.9438714419765777 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4'] 126911 10188 VPVDTGVAA True PC9_epitope_Rep1 827.4388830537498 827.43778993586 44.067 2 -0.12748103981330391 0.030481273007031143 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 38969 10646 HIYDYNLKLK True PC9_epitope_Rep6 1305.7081220316097 1305.7070299358602 51.768 2 -0.12748760422326363 0.030481273007031143 0.9438714419765777 ['ENSG00000184378|ENST00000330368|ACTRT3'] 105037 5883 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 30.118 3 -0.12749988075988042 0.030481273007031143 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 104564 5551 SSSISSFKDPK True PC9_epitope_Rep5 1181.59281749585 1181.59117490379 26.357 3 -0.12751799457742916 0.030481273007031143 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1'] 88 12201 AAAPPLTL True H1975_Epitope_Rep2 752.4432401582001 752.44269496793 52.013 1 -0.1275662251034578 0.030481273007031143 0.9438714419765777 ['nc|ENSG00000105327|Q96PG8-1|BBC3', 'nc|ENSG00000105327|Q96PG8|BBC3'] 83039 5989 PYLDNQVRR True PC9_epitope_Rep5 1159.60980497267 1159.60816490379 28.032 3 -0.12765042524984646 0.030481273007031143 0.9438714419765777 ['ENST00000584808.1_1_6:32938512-32938569:+|nuORF', 'ENST00000415875.2_1_6:32938180-32938569:+|nuORF'] 113262 22131 TQFADMISL True PC9_epitope_Rep5 1024.4899326504399 1024.48937496793 90.161 1 -0.1276717424799148 0.030481273007031143 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 73010 9357 NDEELNKLLGK True NCI_RA007_Epitope_Rep4 1271.6721304457099 1271.67049490379 42.847 3 -0.12769413912315758 0.03051903788100107 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 4103 6423 AHSSDPVEM True PC9_epitope_Rep5 971.40184592203 971.40074993586 29.682 2 -0.12774953972457112 0.03051903788100107 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF'] 113032 9749 TPTYGDLNHL True H1975_Epitope_Rep1 1129.54038800017 1129.53928993586 42.429 2 -0.12775371149157042 0.03053672976552154 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'ENSG00000173213|ENST00000308911|TUBB8B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'CON__ENSEMBL:ENSBTAP00000025008', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 6428 9562 APSGNYVAC True PC9_epitope_Rep3 880.3749028981999 880.37380993586 41.733 2 -0.12776450070988746 0.03053672976552154 0.9438714419765777 ['ENSG00000114450|ENST00000232564|GNB4'] 46666 9570 ITVNDLPVGR True H1975_Epitope_Rep1 1082.6084079903399 1082.60730993586 41.734 2 -0.12779199574548486 0.03053672976552154 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 88330 11135 QYLPHVARL True PC9_epitope_Rep4 1095.61891310439 1095.6178099358601 50.607 2 -0.12793016317701658 0.03055441958287083 0.9438714419765777 ['ENSG00000148248|ENST00000371989|SURF4', 'ENST00000467910.5_1_9:136231851-136242840:-|nuORF', 'nc|ENSG00000148248|O15260-3|SURF4', 'nc|ENSG00000148248|O15260-2|SURF4'] 135490 6148 YEDGGKPPVP True H1975_Epitope_Rep3 1057.50802524273 1057.5069299358602 28.659 2 -0.12795359159780048 0.03055441958287083 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 49071 15497 KFRNEDIVP True PC9_epitope_Rep6 1116.5927579261997 1116.5916699358602 71.788 2 -0.12803213012856504 0.03055441958287083 0.9438714419765777 ['ENSG00000100372|ENST00000435456|SLC25A17', 'MKL1-SLC25A17|1|fusion', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 44448 20824 INLEELETL True PC9_epitope_Rep4 1072.56520576568 1072.5641099358602 88.25 2 -0.12807353453125114 0.03057091673806371 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5'] 47623 14326 IYPEVVHMF True NCI_RA007_Epitope_Rep4 1133.5579526406098 1133.55684993586 62.411 2 -0.12810662433048 0.03057091673806371 0.9438714419765777 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 62901 22347 LMTFFLAL True PC9_epitope_Rep6 954.5248616071799 954.52376993586 98.928 2 -0.12820769748855582 0.03057091673806371 0.9438714419765777 ['ENSG00000174669|ENST00000357440|SLC29A2'] 5171 19047 ALPEDLVEV True PC9_epitope_Rep6 983.5175272972699 983.51642993586 85.909 2 -0.12821372565425698 0.03057091673806371 0.9438714419765777 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1', 'ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 99343 13493 SLDRQLTGL True PC9_epitope_Rep2 1001.55055876105 1001.54946993586 57.188 2 -0.12824006607095456 0.03057091673806371 0.9438714419765777 ['ENSG00000168434|ENST00000307149|COG7'] 124534 12567 VLGAFSDG True PC9_epitope_Rep6 764.37046914076 764.36992496793 59.783 1 -0.1283163846804222 0.030584433282716192 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF', 'ENSG00000223609|ENST00000650601|HBD', 'HBD|p.K66N|1|0.32|ENSG00000223609|chr11:5234108-5234108|C/A|missense_variant'] 5688 7668 APAPLTSA True PC9_epitope_Rep4 726.39120458534 726.39065496793 36.876 1 -0.1283383978150367 0.030584433282716192 0.9438714419765777 ['ENSG00000247596|ENST00000305533|TWF2'] 132539 21030 VYPGLAVFF True NCI_RA007_Epitope_Rep2 1011.5429541994698 1011.5423749679301 86.994 1 -0.12834644637060308 0.030584433282716192 0.9438714419765777 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 8532 18602 ATWLALNV True PC9_epitope_Rep6 886.4912529797799 886.49070496793 84.196 1 -0.12834763335314128 0.030584433282716192 0.9438714419765777 ['ENST00000538588.2_1_7:99821243-99844125:-|nuORF', 'nc|ENSG00000291122|Q8NAP1|CASTOR3P', 'ENSG00000274070|ENST00000616305|CASTOR2'] 5803 13682 APFGGFKMS True PC9_epitope_Rep6 940.4476739156399 940.44656993586 64.412 2 -0.12840529603491432 0.030584433282716192 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 101749 5635 SPHLGPAPA True PC9_epitope_Rep4 845.4395517600899 845.43844993586 28.472 2 -0.1284224177277464 0.030584433282716192 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant', 'IGF2R-SYTL3|1|fusion', 'IGF2R-SYTL3|2|fusion'] 112532 5553 TPAGAAVSA True PC9_epitope_Rep1 743.3813681776301 743.3808149679301 26.189 1 -0.12842616528705755 0.030584433282716192 0.9438714419765777 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF', 'ENST00000509039.5_1_4:2877642-2901297:+|nuORF', 'ADD1-FAM193A|4|fusion', 'ADD1-FAM193A|3|fusion', 'ADD1-FAM193A|1|fusion', 'ADD1-FAM193A|2|fusion', 'ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 79810 14131 PIDGIDAVL True NCI_RA007_Epitope_Rep5 911.49639792987 911.4958449679301 61.044 1 -0.128468359404486 0.030584433282716192 0.9438714419765777 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000494204.1_1_X:24833141-24859977:+|nuORF'] 128908 7538 VSTGDVNVE True PC9_epitope_Rep6 918.42944056886 918.42834993586 38.256 2 -0.12850526837278373 0.030584433282716192 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 140298 13653 YYDKHFTEF True PC9_epitope_Rep5 1248.54513902744 1248.54349490379 57.539 3 -0.1285175934358974 0.030584433282716192 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 3854 11141 AHALPTTL True PC9_epitope_Rep5 822.4599528515001 822.45884993586 47.838 2 -0.12857078417378398 0.030600922699577583 0.9438714419765777 ['ENSG00000130309|ENST00000252599|COLGALT1'] 60543 17943 LIPPSLQGV True PC9_epitope_Rep6 922.5487678558999 922.54766993586 81.644 2 -0.12857256600830028 0.030600922699577583 0.9438714419765777 ['ENSG00000177666|ENST00000336615|PNPLA2', 'ENST00000525250.5_1_11:821680-823850:+|nuORF'] 74061 9178 NHSTSFSL True PC9_epitope_Rep4 891.4086455546301 891.40754993586 42.897 2 -0.1286112550610298 0.030600922699577583 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 22000 9168 ESPALLLQK True NCI_RA007_Epitope_Rep4 997.5807962601699 997.57968993586 42.105 2 -0.12864534445394354 0.030600922699577583 0.9438714419765777 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 116981 18843 TYPNTYIF True PC9_epitope_Rep6 1017.48074786573 1017.47964993586 85.124 2 -0.1286859890613988 0.030600922699577583 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 49123 6015 KGEYDVTVPK True NCI_RA007_Epitope_Rep1 1134.5920892198599 1134.59044490379 27.443 3 -0.1287004672392386 0.03061860084867832 0.9438714419765777 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 12993 5841 DLQEPPPP True H1975_Epitope_Rep2 891.4337976733099 891.43324496793 27.458 1 -0.1287232396059454 0.03061860084867832 0.9438714419765777 ['ENSG00000142530|ENST00000600100|GARIN5A', 'nc|ENSG00000142530|Q6IPT2-2|GARIN5A'] 14829 15993 DYEAGHLSF True PC9_epitope_Rep4 1037.4454249861699 1037.4443299358602 69.45 2 -0.12872329948732697 0.03061860084867832 0.9438714419765777 ['nc|ENSG00000154370|Q96F44-3|TRIM11', 'ENSG00000154370|ENST00000284551|TRIM11'] 83283 12389 QAFQDSAAL True PC9_epitope_Rep1 949.4505103666098 949.44940993586 52.514 2 -0.12880980560950847 0.030655740895731552 0.9438714419765777 ['ENSG00000204740|ENST00000454679|MALRD1'] 20370 21833 EPIPYEFMA True PC9_epitope_Rep1 1095.49468367771 1095.4935899358602 88.79 2 -0.1288355378164496 0.030655740895731552 0.9438714419765777 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 77305 13103 NYKKFYEAF True PC9_epitope_Rep4 1208.5866099165999 1208.58496490379 58.294 3 -0.12885972643918797 0.030655740895731552 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 103626 12883 SRDKTIIMW True PC9_epitope_Rep6 1148.60121443492 1148.59957490379 61.079 3 -0.12889321584043345 0.03067341377968081 0.9438714419765777 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 76144 7385 NRRFSGQP True H1975_Epitope_Rep2 960.488961564 960.48786993586 33.346 2 -0.12896413091039607 0.03067341377968081 0.9438714419765777 ['ADAM9-RNF170|1|fusion', 'nc|ENSG00000120925|Q96K19-4|RNF170', 'nc|ENSG00000120925|Q96K19-6|RNF170', 'nc|ENSG00000120925|Q96K19-2|RNF170', 'ENSG00000120925|ENST00000527424|RNF170', 'ENST00000528318.5_1_8:42716773-42751856:-|nuORF'] 55887 14039 LDGCRGDILSA True H1975_Epitope_Rep2 1118.53900810118 1118.5379099358602 59.153 2 -0.1289699831042908 0.03067341377968081 0.9438714419765777 ['ENSG00000033100|ENST00000035307|CHPF2', 'nc|ENSG00000033100|Q9P2E5-2|CHPF2'] 46139 7418 ITAPPGTAA True PC9_epitope_Rep4 797.42831837005 797.4272299358599 35.881 2 -0.12899995971254472 0.030711741694400652 0.9438714419765777 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 48666 3205 KELEKTYSA True NCI_RA007_Epitope_Rep5 1067.54989005471 1067.5487899358602 17.702 2 -0.12910091463518183 0.03072821391040361 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000496738.5_1_1:156104631-156105741:+|nuORF'] 14997 5846 DYVDRTGN True NCI_RA007_Epitope_Rep2 938.4093738306201 938.40826993586 27.357 2 -0.12912505236674102 0.03072821391040361 0.9438714419765777 ['ENSG00000124772|ENST00000244751|CPNE5', 'nc|ENSG00000124772|Q9HCH3-2|CPNE5'] 108896 3543 TESHNSRKKRE True NCI_RA007_Epitope_Rep2 1370.70147351138 1370.6998349037901 18.433 3 -0.12917491630384062 0.03072821391040361 0.9438714419765777 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6'] 115040 19040 TTPIKLLAV True PC9_epitope_Rep1 954.6113681124599 954.61026993586 78.028 2 -0.12919852052489905 0.03072821391040361 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 21421 8524 ERNNTRLLL True PC9_epitope_Rep2 1127.64110510095 1127.63944490379 38.151 3 -0.1292149950783555 0.03072821391040361 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA1-ALDH3B1|1|fusion', 'PPFIA2|p.N382Tfs*10|1|0.1|ENSG00000139220|chr12:81374755-81374755|T/-|frameshift_variant', 'PPFIA2|p.A489Lfs*3|1|0.65|ENSG00000139220|chr12:81368742-81368742|C/-|frameshift_variant', 'ENST00000602716.5_1_19:49631560-49640169:+|nuORF', 'ENST00000421230.6_1_19:49631605-49643027:+|nuORF', 'nc|ENSG00000143847|O75335|PPFIA4', 'ENSG00000177380|ENST00000334186|PPFIA3', 'nc|ENSG00000177380|O75145-2|PPFIA3', 'nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'ENSG00000143847|ENST00000295706|PPFIA4'] 72747 11371 NAAPGVDL True PC9_epitope_Rep6 755.38136817763 755.38026993586 54.784 2 -0.12928535496782226 0.030747076108743457 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7'] 36694 14954 GVMDGVPSA True PC9_epitope_Rep5 831.3796539254699 831.3791049679301 62.522 1 -0.12943765624696232 0.030822517561440717 0.9438714419765777 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 75966 18293 NRGQFFTVY True PC9_epitope_Rep3 1130.55089311422 1130.5497899358602 75.569 2 -0.1294535798125775 0.030822517561440717 0.9438714419765777 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000587673.5_1_19:1109158-1109530:-|nuORF'] 129798 15389 VTLAGEEI True PC9_epitope_Rep2 830.43854870058 830.43744993586 64.476 2 -0.129465957080666 0.030822517561440717 0.9438714419765777 ['ENST00000339303.5_16:18434460-18437593:-|nuORF'] 55546 8579 LAYTLGVK True H1975_Epitope_Rep3 863.5116540711899 863.51054993586 37.99 2 -0.12949272978357748 0.030822517561440717 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000417549.1_1_13:28788954-28789521:+|nuORF', 'ENST00000419025.1_1_3:183745012-183745345:-|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000325349.6_1_12:17144017-17144188:+|nuORF', 'ENST00000553854.1_1_14:82128143-82128728:+|nuORF', 'ENST00000559385.1_1_15:53230224-53230302:-|nuORF'] 117656 7409 VAIRRKDSPP True H1975_Epitope_Rep2 1137.66184054553 1137.6607499358602 33.441 2 -0.12965421525910265 0.03084137608966376 0.9438714419765777 ['ENST00000421951.5_1_2:89072537-89077837:+|nuORF'] 56748 6970 LEANKLQLQEK True NCI_RA007_Epitope_Rep1 1312.7350650554397 1312.73341490379 31.114 3 -0.12973912569879834 0.030877889329908943 0.9438714419765777 ['nc|ENSG00000167740|Q8WUJ1-3|CYB5D2', 'ENSG00000167740|ENST00000301391|CYB5D2'] 140162 11247 YVTEKVLAA True PC9_epitope_Rep3 992.5542471591598 992.55314993586 48.269 2 -0.12974656582954794 0.030877889329908943 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENSG00000136872|ENST00000647789|ALDOB'] 140364 15576 YYEKLHTYF True PC9_epitope_Rep3 1262.5971746003 1262.59552490379 65.061 3 -0.1297565809136223 0.030877889329908943 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 71888 6058 MPNGTPHPTAA True PC9_epitope_Rep1 1092.50222866964 1092.50112993586 28.116 2 -0.1297633984196216 0.030877889329908943 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 86618 18789 QRDSLLWKL True PC9_epitope_Rep3 1157.6556925359298 1157.65405490379 77.494 3 -0.12978080645814197 0.030896143818825637 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 65036 14858 LSDKEELVGT True PC9_epitope_Rep3 1089.5553693579698 1089.55426993586 62.287 2 -0.1298053149007366 0.030896143818825637 0.9438714419765777 ['GDF6|p.A164T|1|0.6|ENSG00000156466|chr8:96145441-96145441|C/T|missense_variant'] 63587 20489 LPLLPAPGAAA True PC9_epitope_Rep3 989.5909670210498 989.58986993586 84.069 2 -0.12984416604801408 0.030914998346271327 0.9438714419765777 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 88218 16600 QYASLMHSF True PC9_epitope_Rep2 1082.48551597634 1082.4844099358602 69.094 2 -0.1298668904521548 0.030953307392996107 0.9438714419765777 ['ITCH-DYNLRB1|3|fusion', 'ITCH-DYNLRB1|1|fusion', 'ENSG00000125971|ENST00000357156|DYNLRB1', 'ITCH-DYNLRB1|2|fusion', 'ENST00000480759.1_1_20:33117938-33128425:+|nuORF'] 81976 8233 PSRRLSSPAP True H1975_Epitope_Rep3 1066.5883412521 1066.5872499358602 36.651 2 -0.12988571435578125 0.03097216007470672 0.9438714419765777 ['ENST00000373880.8_1_10:60936426-60936663:+|nuORF'] 32876 12337 GILKNGLI True PC9_epitope_Rep1 826.5276384884999 826.52654993586 52.311 2 -0.1299508734999786 0.031029921014746508 0.9438714419765777 ['nc|ENSG00000062194|Q86WP2-4|GPBP1', 'nc|ENSG00000062194|Q86WP2-3|GPBP1', 'ENSG00000062194|ENST00000506184|GPBP1', 'nc|ENSG00000062194|Q86WP2-2|GPBP1'] 97669 10562 SHDFYSHEL True PC9_epitope_Rep1 1133.4777877436102 1133.47615490379 45.518 3 -0.1300908285118968 0.03104575163398693 0.9438714419765777 ['ENSG00000095015|ENST00000399503|MAP3K1', 'MAP3K1|p.T946Kfs*22|1|0.62|ENSG00000095015|chr5:56882037-56882037|C/-|frameshift_variant', 'MAP3K1|p.T947Nfs*56|1|0.61|ENSG00000095015|chr5:56882039-56882040|AC/-|frameshift_variant'] 33284 18005 GLASLQIP True PC9_epitope_Rep6 797.46470387877 797.4641549679301 81.884 1 -0.13017640757052526 0.03104575163398693 0.9438714419765777 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1', 'nc|ENSG00000125149|Q9BSU1-2|PHAF1', 'ENST00000569626.1_1_16:67154016-67168169:+|nuORF'] 3355 9287 AGHSDVVL True PC9_epitope_Rep5 796.4079172786401 796.40682993586 40.673 2 -0.1301987939131286 0.03104575163398693 0.9438714419765777 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 60423 15993 LIKNTLTSL True PC9_epitope_Rep2 1001.61209638845 1001.61098993586 66.77 2 -0.13021753341392447 0.03104575163398693 0.9438714419765777 ['OMG|p.R146T|1|0.35|ENSG00000126861|chr17:31295895-31295895|C/G|missense_variant'] 55677 20591 LDAYSTLIF True H1975_Epitope_Rep1 1041.53826274185 1041.53767496793 85.621 1 -0.13022641233199192 0.03104575163398693 0.9438714419765777 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 34886 8009 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 35.782 2 -0.13027228301600888 0.03104575163398693 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 14918 7556 DYKYRYFRRVP True H1975_Epitope_Rep3 1561.8153810648098 1561.81372490379 34.045 3 -0.1303311702197639 0.031064599583730475 0.9438714419765777 ['nc|ENSG00000112146|Q9UK97-3|FBXO9', 'ENSG00000112146|ENST00000323557|FBXO9', 'nc|ENSG00000112146|Q9UK97|FBXO9', 'ENST00000474457.1_1_6:52958219-52962625:+|nuORF'] 84104 9309 QEQGVSVV True PC9_epitope_Rep2 844.4290466460399 844.4279499358599 41.146 2 -0.13038779505529943 0.03108344680023342 0.9438714419765777 ['ENSG00000171467|ENST00000361428|ZNF318'] 67766 9583 LTGTYESAV True PC9_epitope_Rep5 939.45492704071 939.45382993586 41.822 2 -0.13049625052420705 0.03109745424842957 0.9438714419765777 ['CON__Streptavidin'] 66985 21370 LTAEDLFEA True PC9_epitope_Rep2 1007.4811417885498 1007.48004993586 87.669 2 -0.13049813618476994 0.03109745424842957 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 82740 7096 PVPYRKIA True PC9_epitope_Rep6 942.5650866263799 942.56398993586 36.334 2 -0.1304994171725664 0.03109745424842957 0.9438714419765777 ['ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1'] 35275 14239 GSPALFTI True H1975_Epitope_Rep2 804.43815477776 804.43760496793 59.919 1 -0.13051704941492281 0.03109745424842957 0.9438714419765777 ['FLNA|p.R1087L|1|0.18|ENSG00000196924|chrX:154360535-154360535|C/A|missense_variant'] 16157 11664 EEEREKTL True PC9_epitope_Rep3 1032.5087535187197 1032.5076499358602 49.884 2 -0.13052119519033942 0.03109745424842957 0.9438714419765777 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 65086 16776 LSDLNDELLLK True NCI_RA007_Epitope_Rep1 1271.69728256439 1271.69618993586 69.382 2 -0.13056028206950895 0.03109745424842957 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 111079 21818 TLEDIEIIQ True PC9_epitope_Rep4 1072.5652057656798 1072.5641099358602 92.118 2 -0.1305843131663982 0.03109745424842957 0.9438714419765777 ['ENST00000456360.5_1_Y:23556925-23559248:-|nuORF'] 107393 16283 SYSTLTGSL True PC9_epitope_Rep4 927.45492704071 927.45382993586 70.589 2 -0.13060284617973533 0.03109745424842957 0.9438714419765777 ['ENSG00000115165|ENST00000264192|CYTIP', 'CYTIP|p.L61*|1|0.39|ENSG00000115165|chr2:157434740-157434740|A/-|frameshift_variant', 'ENST00000483929.1_1_2:158291208-158300532:-|nuORF', 'ENST00000462109.1_1_2:158290860-158300532:-|nuORF'] 37042 17620 GVSDVDYSL True PC9_epitope_Rep2 953.43419159613 953.43364496793 73.054 1 -0.13061889891528405 0.03109745424842957 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 2778 7174 AEVDAAMAA True NCI_RA007_Epitope_Rep3 847.3745685450299 847.37346993586 35.333 2 -0.13068284156321613 0.03113574484636328 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 134959 17768 YAFPKSITV True PC9_epitope_Rep2 1024.5593325395998 1024.55822993586 73.631 2 -0.13071877234347337 0.031153980786433822 0.9438714419765777 ['ENSG00000155380|ENST00000369626|SLC16A1', 'nc|ENSG00000155380|P53985-2|SLC16A1'] 34543 5959 GQEVNELKT True PC9_epitope_Rep1 1016.51383889916 1016.51274993586 27.735 2 -0.13073686287465994 0.031153980786433822 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 124145 17480 VKVNLVYL True PC9_epitope_Rep4 946.5851533646198 946.58404993586 75.237 2 -0.13083647059861572 0.031190448411309454 0.9438714419765777 ['nc|nan|Q8N4C9-2|C17orf78', 'ENSG00000278505|ENST00000615133|C17orf78'] 67331 20992 LTDQTLIYL True PC9_epitope_Rep4 1078.5910265906998 1078.59047496793 88.906 1 -0.13085464616400574 0.031190448411309454 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 61621 19522 LLGTIIQL True PC9_epitope_Rep6 869.55860426361 869.55750993586 87.754 2 -0.13086922978203064 0.031190448411309454 0.9438714419765777 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'ENST00000488988.5_1_3:52422617-52433783:+|nuORF', 'ENST00000486752.5_1_3:52422617-52434459:+|nuORF'] 86088 7557 QPQKVLASL True PC9_epitope_Rep3 982.5811306133398 982.58002993586 34.069 2 -0.1308802056999997 0.031190448411309454 0.9438714419765777 ['ENST00000327155.9_1_18:20513414-20516744:+|nuORF'] 109060 20486 TFDDITVYL True H1975_Epitope_Rep1 1085.52809198097 1085.52698993586 85.202 2 -0.13104159279214397 0.031226303202348777 0.9438714419765777 ['ENSG00000106479|ENST00000223210|ZNF862', 'ZNF862|p.S759Afs*17|1|0.48|ENSG00000106479|chr7:149861434-149861435|-/GCCTCTCTCTCCTGCTTAGTCCCTATGTTTCT|frameshift_variant', 'ENST00000489820.5_1_7:149535487-149541977:+|nuORF'] 126049 11467 VPAPSPLSA True PC9_epitope_Rep6 837.45961849833 837.45852993586 55.174 2 -0.13107480030595833 0.031226303202348777 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'RTN4|p.V670Yfs*4|1|0.29|ENSG00000115310|chr2:55026092-55026092|T/-|frameshift_variant'] 69309 14959 LVPPDQPEV True PC9_epitope_Rep1 992.51786165044 992.51676993586 62.362 2 -0.1310792010811669 0.031226303202348777 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 37448 15564 GWYDEEHPLVF True NCI_RA007_Epitope_Rep3 1390.6193665968601 1390.61826993586 68.785 2 -0.13107984122003552 0.031226303202348777 0.9438714419765777 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB'] 60542 19111 LIPPSLQGV True PC9_epitope_Rep4 922.5487678558999 922.54766993586 81.602 2 -0.13108424750298203 0.031226303202348777 0.9438714419765777 ['ENSG00000177666|ENST00000336615|PNPLA2', 'ENST00000525250.5_1_11:821680-823850:+|nuORF'] 88369 6284 QYNPHVHQL True PC9_epitope_Rep3 1134.55704112382 1134.55540490379 29.205 3 -0.13111776887876828 0.031237243658275828 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 105373 6754 STYRDFQQA True PC9_epitope_Rep4 1114.50433684462 1114.5032299358602 33.175 2 -0.1311590718101986 0.031237243658275828 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 95192 7196 SAAHAIVSV True PC9_epitope_Rep6 853.46576650793 853.46466993586 36.768 2 -0.13116353511124093 0.031237243658275828 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 76880 19485 NVIQTVPNL True PC9_epitope_Rep2 996.5603951687599 996.55928993586 80.331 2 -0.13117035036568428 0.031237243658275828 0.9438714419765777 ['ENSG00000196510|ENST00000455511|ANAPC7', 'nc|ENSG00000196510|Q9UJX3-2|ANAPC7', 'ENST00000550231.1_1_12:110825542-110834223:-|nuORF'] 103706 14736 SRDYLGQL True PC9_epitope_Rep5 950.48214484806 950.48159496793 61.681 1 -0.13117111385174537 0.031237243658275828 0.9438714419765777 ['COL11A2|p.P897Lfs*87|1|0.39|ENSG00000204248|chr6:33173394-33173394|G/-|frameshift_variant'] 47719 19668 IYQEVWNLF True NCI_RA007_Epitope_Rep3 1210.60225998074 1210.60116993586 85.774 2 -0.13119505496834052 0.031237243658275828 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 17357 5561 EHDTTEYKL True PC9_epitope_Rep2 1134.51931820242 1134.51822993586 26.781 2 -0.13122180715459517 0.031237243658275828 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 11615 12391 DHARTITVAL True PC9_epitope_Rep1 1095.60365696307 1095.60254993586 52.523 2 -0.13122953499416123 0.031237243658275828 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 101985 11524 SPNGQFVAP True PC9_epitope_Rep4 915.4450310633499 915.4444849679301 52.089 1 -0.13130681898726151 0.031237243658275828 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 54573 19337 LACALQAFSL True PC9_epitope_Rep5 1035.5423025764699 1035.54120993586 79.424 2 -0.13135675931898677 0.031237243658275828 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 65037 13321 LSDKEELVGT True PC9_epitope_Rep4 1089.5553693579698 1089.55426993586 59.139 2 -0.13136450471107827 0.031237243658275828 0.9438714419765777 ['GDF6|p.A164T|1|0.6|ENSG00000156466|chr8:96145441-96145441|C/T|missense_variant'] 112875 11291 TPPGPLASA True PC9_epitope_Rep5 809.42831837005 809.4272299358599 48.425 2 -0.13139568679197106 0.031237243658275828 0.9438714419765777 ['ENSG00000124875|ENST00000226317|CXCL6'] 3428 8712 AGLAKSIGV True PC9_epitope_Rep6 814.4912529797799 814.49014993586 43.367 2 -0.13145104907642796 0.031237243658275828 0.9438714419765777 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000198610|ENST00000263126|AKR1C4', 'ENST00000605322.1_1_10:5136636-5141836:+|nuORF', 'chr10:5048895-5077900|250|16.96|0.18|6.55|+|ENST00000602997|AKR1C3,AKR1C3', 'ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|317|31.41|0.67|5.55|+|ENST00000380859|AKR1C1,AKR1C1', 'chr10:4963893-4965914|317|27.99|0.97|4.85|+|ENST00000380859|AKR1C1,AKR1C1'] 14616 14675 DVLKFLAA True H1975_Epitope_Rep2 875.5116540711899 875.51054993586 61.608 2 -0.13148682249950547 0.031237243658275828 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 74664 14059 NLGPKIIML True NCI_RA007_Epitope_Rep1 997.59942352977 997.59832993586 58.715 2 -0.13152577888874709 0.0312536443148688 0.9438714419765777 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8'] 58900 18878 LFTWRRPVT True PC9_epitope_Rep5 1174.66111226954 1174.65946490379 77.633 3 -0.13152829790889112 0.0312536443148688 0.9438714419765777 ['ENST00000394936.7_1_10:73590929-73591613:-|nuORF'] 8704 9532 AVDGNTVEL True NCI_RA007_Epitope_Rep4 916.45017601344 916.44962496793 43.516 1 -0.13153758258541787 0.0312536443148688 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 116978 19983 TYPNTYIF True PC9_epitope_Rep4 1017.48074786573 1017.47964993586 84.997 2 -0.13157855680446104 0.0312536443148688 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 4444 10783 AIYGTDDL True H1975_Epitope_Rep1 866.4021631918599 866.4016149679301 46.439 1 -0.13160390860962884 0.0312536443148688 0.9438714419765777 ['ENST00000508252.1_1_5:137463382-137465094:-|nuORF', 'ENSG00000112981|ENST00000265191|NME5'] 631 10076 AATATFAAA True PC9_epitope_Rep1 793.3970182417698 793.39592993586 43.628 2 -0.13162926224341212 0.03129130062971313 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 40976 16412 HYAALAHYF True PC9_epitope_Rep1 1091.51886470995 1091.51776993586 67.952 2 -0.13165429955851055 0.03129130062971313 0.9438714419765777 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'ENST00000566346.2_1_16:33401403-33412789:+|nuORF'] 99321 10768 SLDNIVKL True PC9_epitope_Rep5 900.5280324113199 900.52692993586 46.411 2 -0.13172771451079748 0.031348388852178645 0.9438714419765777 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000463824.1_1_2:203748330-203749074:-|nuORF'] 6469 8301 APTAITEA True PC9_epitope_Rep5 772.3966838886 772.39558993586 36.868 2 -0.13176271920776036 0.031348388852178645 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 36291 19288 GVGPVNISV True PC9_epitope_Rep2 840.4705175352 840.4699649679301 79.566 1 -0.13181805888046982 0.031365994908370096 0.9438714419765777 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q922U2'] 71998 11729 MQDKSSYLL True PC9_epitope_Rep4 1083.52704643515 1083.5259499358601 52.877 2 -0.13185363698477476 0.031365994908370096 0.9438714419765777 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 48059 14322 KALSIFNEL True NCI_RA007_Epitope_Rep5 1033.58079626017 1033.5796899358602 61.781 2 -0.1318580636949636 0.031365994908370096 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 30254 17653 GAAGTVFTTV True PC9_epitope_Rep5 922.47599683846 922.47488993586 72.915 2 -0.13189110806315993 0.03138420878757846 0.9438714419765777 ['nc|ENSG00000172270|P35613-2|BSG', 'chr19:579656-581444|501|42.62|0.0|22.02|+|ENST00000618112|BSG,None', 'ENST00000576925.3_1_19:572634-579657:+|nuORF'] 107193 19014 SYPAFWTSF True NCI_RA007_Epitope_Rep4 1104.4916469026 1104.4905499358601 82.248 2 -0.13189533298821796 0.03138420878757846 0.9438714419765777 ['ENST00000299505.6_1_19:34791118-34791184:+|nuORF'] 75479 6711 NQIKKIENL True PC9_epitope_Rep2 1098.6397081186199 1098.6386099358601 31.226 2 -0.1319860654157432 0.031461329187718615 0.9438714419765777 ['nc|ENSG00000115685|Q15435-2|PPP1R7', 'ENSG00000115685|ENST00000234038|PPP1R7', 'nc|ENSG00000115685|Q15435-5|PPP1R7', 'nc|ENSG00000115685|Q15435-4|PPP1R7', 'nc|ENSG00000115685|Q15435-3|PPP1R7'] 56865 4392 LEDKPSPPP True H1975_Epitope_Rep2 978.5022115863 978.50110993586 22.004 2 -0.1320637201513742 0.0314959100005829 0.9438714419765777 ['ENSG00000116903|ENST00000366645|EXOC8'] 23922 18111 EYNNIQHLF True PC9_epitope_Rep2 1176.5563724174801 1176.55526993586 74.966 2 -0.13208187193193432 0.0314959100005829 0.9438714419765777 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 140300 8394 YYDPHQATF True NCI_RA007_Epitope_Rep4 1140.48762415132 1140.48652993586 39.103 2 -0.1321312590854803 0.0314959100005829 0.9438714419765777 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1', 'PCNX1|p.S602Vfs*6|1|0.21|ENSG00000100731|chr14:70978141-70978144|TCTA/-|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-2|PCNX1', 'ENST00000554879.5_1_14:71374480-71476401:+|nuORF'] 107861 2652 TASAPAKAGK True NCI_RA007_Epitope_Rep5 900.5028802926399 900.50178993586 14.89 2 -0.13216138717368892 0.0314959100005829 0.9438714419765777 ['PLCH1|p.G928Afs*15|1|0.22|ENSG00000114805|chr3:155485571-155485571|C/-|frameshift_variant'] 107411 18200 SYTSGLETL True PC9_epitope_Rep2 969.4654917244101 969.46494496793 75.313 1 -0.13217172576964611 0.0314959100005829 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 131623 6391 VVYTSHLQLK True NCI_RA007_Epitope_Rep3 1186.6710082469 1186.66936490379 32.143 3 -0.1322215489898826 0.0314959100005829 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'nc|ENSG00000183054|Q99666-2|RGPD5', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENST00000522286.5_1_2:113158797-113161561:-|nuORF', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 61736 21742 LLIPGLATA True PC9_epitope_Rep5 867.54295419947 867.5424049679301 88.662 1 -0.1322782860891084 0.0314959100005829 0.9438714419765777 ['ENSG00000125356|ENST00000371437|NDUFA1'] 22026 3622 ESQKVELSESR True NCI_RA007_Epitope_Rep2 1290.6415585934199 1290.6399149037902 18.741 3 -0.13240543028924392 0.03151166631049288 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 104661 10705 STAAKIMGV True PC9_epitope_Rep1 876.4738886634799 876.47278993586 46.066 2 -0.1324083151298424 0.03151166631049288 0.9438714419765777 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31'] 65977 14659 LSLRWVSP True PC9_epitope_Rep1 956.5443511817999 956.54324993586 61.207 2 -0.13244528674282702 0.03151166631049288 0.9438714419765777 ['CRLF1|p.V255L|1|0.42|ENSG00000006016|chr19:18596984-18596984|C/A|missense_variant'] 75290 10758 NPSSVIHVV True PC9_epitope_Rep4 950.51853035678 950.51742993586 49.138 2 -0.13248356675199552 0.03151166631049288 0.9438714419765777 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP'] 70941 4603 M[Oxidation]ELQRAPPA True H1975_Epitope_Rep2 1027.5120654577897 1027.5109699358602 22.81 2 -0.13248652390307164 0.03151166631049288 0.9438714419765777 ['ENST00000372227.5_1_20:44987244-44987289:-|nuORF'] 98090 10712 SHYEEAMGL True PC9_epitope_Rep6 1035.43314605031 1035.43204993586 52.015 2 -0.13251079318975187 0.03151166631049288 0.9438714419765777 ['ENSG00000176953|ENST00000320805|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-3|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-2|NFATC2IP'] 56679 7196 LEADHVISA True H1975_Epitope_Rep3 953.4818104948899 953.48070993586 32.654 2 -0.13254875935443142 0.03152986886838271 0.9438714419765777 ['ENST00000462977.1_1_1:161139323-161139551:+|nuORF', 'ENST00000495483.5_2_1:161137139-161146869:+|nuORF', 'ENSG00000143224|ENST00000367999|PPOX'] 75751 14416 NRAEYYHLL True PC9_epitope_Rep3 1177.58800689893 1177.58635490379 60.555 3 -0.13255406111616574 0.03152986886838271 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 28745 16847 FSYLLEQDL True NCI_RA007_Epitope_Rep3 1126.55464108198 1126.55354993586 74.139 2 -0.1326666812720216 0.03154623154623155 0.9438714419765777 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11', 'nc|ENSG00000138081|Q86XK2-3|FBXO11', 'nc|ENSG00000138081|Q86XK2-4|FBXO11'] 105894 19954 SVLDDNKLLTL True PC9_epitope_Rep4 1229.68671788069 1229.68617496793 84.887 1 -0.13268148953618797 0.03154623154623155 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 71636 22605 MLPSILNQL True PC9_epitope_Rep1 1027.57360270475 1027.5725099358601 91.759 2 -0.13270011871963755 0.03154623154623155 0.9438714419765777 ['RGNEF-BTF3|1|fusion', 'nc|ENSG00000145741|P20290-2|BTF3', 'ENSG00000145741|ENST00000380591|BTF3'] 39109 17902 HLDATKLLL True PC9_epitope_Rep5 1022.61243074162 1022.61132993586 73.877 2 -0.1327092325618683 0.03154623154623155 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 105957 22970 SVLGALIGV True PC9_epitope_Rep5 827.5116540711899 827.51054993586 93.344 2 -0.13276615613425619 0.03154623154623155 0.9438714419765777 ['nc|ENSG00000164051|Q96ER9-2|CCDC51', 'ENSG00000164051|ENST00000395694|CCDC51'] 61842 15860 LLLCRFNRFSV True PC9_epitope_Rep1 1366.75436103138 1366.7527049037901 65.814 3 -0.13287858694522045 0.03160327881589682 0.9438714419765777 ['ENSG00000196208|ENST00000381486|GREB1', 'nc|ENSG00000196208|Q4ZG55-4|GREB1'] 37402 11558 GVYNGKTFNQV True PC9_epitope_Rep5 1225.60913626633 1225.60802993586 49.454 2 -0.13289936769689917 0.03160327881589682 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 42365 13482 IEMDPPALPP True H1975_Epitope_Rep2 1078.53688284286 1078.53578993586 56.991 2 -0.13291247837284187 0.031621474632895656 0.9438714419765777 ['ENST00000518292.1_1_5:67586526-67589028:+|nuORF', 'nc|ENSG00000117461|Q92569-2|PIK3R3', 'nc|ENSG00000145675|P27986-2|PIK3R1', 'ENSG00000117461|ENST00000262741|PIK3R3'] 34088 11638 GPAAAFTAA True PC9_epitope_Rep2 775.38645355807 775.38534993586 50.092 2 -0.13291622403830386 0.031621474632895656 0.9438714419765777 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 29269 16068 FVDGSAIQV True PC9_epitope_Rep6 934.47599683846 934.47488993586 74.132 2 -0.13298267923038876 0.03163721110895319 0.9438714419765777 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-2|SPATS2L'] 56216 9863 LDPNADLAY True H1975_Epitope_Rep1 990.46582607758 990.46472993586 42.872 2 -0.13309263381394873 0.03163721110895319 0.9438714419765777 ['ENSG00000167306|ENST00000285039|MYO5B', 'nc|ENSG00000167306|Q9ULV0-2|MYO5B'] 1315 6583 AEEAARKLLP True H1975_Epitope_Rep3 1096.62405805448 1096.62296993586 30.278 2 -0.13309501140321606 0.03163721110895319 0.9438714419765777 ['ENSG00000088298|ENST00000374492|EDEM2', 'nc|ENSG00000088298|Q9BV94-2|EDEM2'] 80656 17503 PLPPPLPPP True PC9_epitope_Rep4 923.54803957991 923.54694993586 75.329 2 -0.13313335389738287 0.03163721110895319 0.9438714419765777 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 66473 13018 LSRRTTPFVP True PC9_epitope_Rep2 1172.6665915728 1172.66548993586 55.358 2 -0.13313436423138555 0.03163721110895319 0.9438714419765777 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2'] 51982 12258 KLAPPLVTL True NCI_RA007_Epitope_Rep5 950.6164534929001 950.61534993586 53.801 2 -0.13314649251661478 0.03163721110895319 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 52516 5072 KPPPPPPPP True PC9_epitope_Rep1 922.5276384884999 922.52654993586 24.366 2 -0.13322454716079055 0.03165540278101453 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 96916 5542 SETKVFTA True NCI_RA007_Epitope_Rep4 881.4494477374499 881.44834993586 27.913 2 -0.13323851291435643 0.03165540278101453 0.9438714419765777 ['ENSG00000137073|ENST00000379238|UBAP2'] 70436 19139 LYRLKFNEF True PC9_epitope_Rep3 1228.6604435632 1228.65880490379 78.838 3 -0.1332488171106284 0.03167359303996582 0.9438714419765777 ['nc|ENSG00000188042|P56559|ARL4C', 'ENSG00000188042|ENST00000339728|ARL4C'] 109724 12064 THGGLVTGL True PC9_epitope_Rep3 853.46576650793 853.46466993586 51.447 2 -0.13325213054680143 0.03167359303996582 0.9438714419765777 ['ENSG00000119669|ENST00000238647|IRF2BPL'] 84965 17281 QIDGTLSTI True PC9_epitope_Rep2 946.49712620586 946.4965749679301 71.729 1 -0.13326170803200257 0.031691166475717035 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1', 'ENSG00000164695|ENST00000297265|CHMP4C'] 85058 11467 QILEKDAVIKV True PC9_epitope_Rep6 1254.75473787086 1254.7531049037902 55.174 3 -0.1332618866366634 0.031691166475717035 0.9438714419765777 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 119323 6770 VELSGAERERP True NCI_RA007_Epitope_Rep1 1241.63641364333 1241.63530993586 30.342 2 -0.13329186373228383 0.031691166475717035 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-2|NUP160', 'ENST00000529863.1_1_11:47861610-47869870:-|nuORF'] 29416 23965 FVFPGELLL True PC9_epitope_Rep2 1033.5848190114498 1033.5837299358602 97.672 2 -0.1333535878006609 0.031708122172385 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5'] 32850 20519 GIIDAFHQI True PC9_epitope_Rep1 1012.5341804209202 1012.53308993586 83.738 2 -0.13337307160791895 0.031708122172385 0.9438714419765777 ['ENSG00000100372|ENST00000435456|SLC25A17', 'MKL1-SLC25A17|1|fusion', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 12500 18851 DLADELALVD True H1975_Epitope_Rep1 1072.52882025696 1072.5277299358602 78.61 2 -0.13338655140332473 0.031708122172385 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENSG00000166796|ENST00000541669|LDHC', 'ENST00000494573.6_1_11:18418389-18421097:+|nuORF'] 58588 7672 LFERLTLKHD True NCI_RA007_Epitope_Rep5 1270.70337100434 1270.70173490379 36.212 3 -0.13341125400045858 0.031708122172385 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL'] 4263 21315 AIIGGMFTV True PC9_epitope_Rep4 907.48372507119 907.48262993586 90.154 2 -0.13344299887456257 0.03172569120844983 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 131981 12348 VYGGGAAEI True PC9_epitope_Rep1 835.4075829254699 835.40648993586 52.353 2 -0.1334492595285269 0.03172569120844983 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 9424 20858 AVVPGLLEV True PC9_epitope_Rep4 895.5378688190299 895.5373249679301 88.384 1 -0.13345910615529347 0.03172569120844983 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 39245 16512 HLLDHLSIV True PC9_epitope_Rep6 1045.5920296502102 1045.59092993586 75.947 2 -0.13348276614495105 0.031763289713819746 0.9438714419765777 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L'] 63170 9449 LNSVVQSV True PC9_epitope_Rep1 844.4654321547599 844.46432993586 41.202 2 -0.13354932861467886 0.031763289713819746 0.9438714419765777 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618', 'ENST00000470105.1_1_9:116790870-116812444:+|nuORF', 'nc|ENSG00000157657|Q5T7W0-4|ZNF618', 'ENSG00000157657|ENST00000374126|ZNF618'] 116896 9708 TYPDVNNSI True NCI_RA007_Epitope_Rep4 1021.4716397340101 1021.47054993586 44.187 2 -0.13355426257400033 0.03178147083948125 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 33646 19819 GLNTATILLL True PC9_epitope_Rep2 1027.62774645259 1027.62664993586 81.623 2 -0.13355479474799978 0.03178147083948125 0.9438714419765777 ['CENPM|p.V21L|1|0.22|ENSG00000100162|chr22:41946493-41946493|C/A|missense_variant'] 45822 13182 ISPMAPIAT True PC9_epitope_Rep1 899.47863969075 899.47754993586 55.568 2 -0.13357127460886836 0.03179841590309054 0.9438714419765777 ['ENST00000592091.5_3_19:5897005-5903757:-|nuORF', 'ENST00000593233.1_1_19:5901390-5903757:-|nuORF', 'ENST00000591160.1_1_19:5902449-5903757:-|nuORF'] 70248 17798 LYMPKLLYF True NCI_RA007_Epitope_Rep4 1186.6460393690197 1186.64494993586 77.061 2 -0.13359666664252004 0.03179841590309054 0.9438714419765777 ['ENSG00000170786|ENST00000303749|SDR16C5', 'nc|ENSG00000170786|Q8N3Y7-2|SDR16C5'] 38526 3896 HHDSHSSVIL True PC9_epitope_Rep4 1130.5468703629401 1130.54521490379 21.168 3 -0.13362362115784188 0.03179841590309054 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 80283 12854 PLEDYSGECFR True PC9_epitope_Rep5 1314.55505208814 1314.5533949037901 54.453 3 -0.13365759867749097 0.03179841590309054 0.9438714419765777 ['ENSG00000150990|ENST00000308736|DHX37'] 1677 8926 AEGMPPMQA True H1975_Epitope_Rep2 930.3939240906199 930.3933749679301 39.297 1 -0.13367574949496167 0.031816593547385176 0.9438714419765777 ['ENSG00000170265|ENST00000610704|ZNF282', 'nc|ENSG00000170265|Q9UDV7-2|ZNF282'] 13219 19736 DLTPNQEYL True PC9_epitope_Rep1 1091.51350454599 1091.5124099358602 80.743 2 -0.13368947078533533 0.031816593547385176 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209'] 47556 19663 IYMDTLNIF True NCI_RA007_Epitope_Rep5 1128.5525329069999 1128.5514299358601 82.547 2 -0.13386102734284439 0.03183353391047789 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 130803 7780 VVETDPSPY True H1975_Epitope_Rep1 1005.46549172441 1005.4649749679301 34.879 1 -0.13388892313097078 0.03183353391047789 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 112903 10597 TPQEDYVEA True PC9_epitope_Rep2 1050.4505699362599 1050.4494699358602 46.077 2 -0.13390845437701357 0.03183353391047789 0.9438714419765777 ['ENSG00000140829|ENST00000268482|DHX38'] 2797 5673 AEVEGRALP True H1975_Epitope_Rep2 940.4977949121998 940.49668993586 26.818 2 -0.1339115817404769 0.03183353391047789 0.9438714419765777 ['ENST00000508158.5_1_4:3386893-3430067:+|nuORF', 'nc|ENSG00000159788|O14924-7|RGS12', 'nc|ENSG00000159788|O14924-6|RGS12', 'nc|ENSG00000159788|O14924-2|RGS12', 'nc|ENSG00000159788|O14924-3|RGS12', 'nc|ENSG00000159788|O14924-5|RGS12', 'nc|ENSG00000159788|O14924-4|RGS12', 'ENSG00000159788|ENST00000336727|RGS12', 'ENST00000506998.5_1_4:3371967-3419414:+|nuORF'] 58085 8095 LERRLWEENRR True NCI_RA007_Epitope_Rep5 1555.8331563872696 1555.83151490379 37.827 3 -0.13406810472153755 0.031849853463501734 0.9438714419765777 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 89003 7640 REDTLRVLAA True H1975_Epitope_Rep2 1142.64077074778 1142.6391149037902 34.339 3 -0.1340828324544193 0.031849853463501734 0.9438714419765777 ['ENST00000508390.1_1_3:131245302-131245881:+|nuORF', 'nc|ENSG00000126453|Q9HB09-3|BCL2L12', 'ENSG00000126453|ENST00000246784|BCL2L12', 'nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 79859 19876 PIIGSLFL True H1975_Epitope_Rep3 858.5214904789 858.5209449679301 83.209 1 -0.13421859255506982 0.031849853463501734 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'ENSG00000108784|ENST00000225927|NAGLU'] 83073 20641 PYMAKFVVF True PC9_epitope_Rep2 1100.5728744287599 1100.5717699358602 84.83 2 -0.13428726197981924 0.031849853463501734 0.9438714419765777 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant', 'CAMK2D-ANK2|1|fusion', 'CAMK2D-ANK2|2|fusion', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3'] 14007 7429 DRTTISRAL True PC9_epitope_Rep5 1031.5723568347898 1031.5712499358601 33.53 2 -0.13428887479294102 0.031849853463501734 0.9438714419765777 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 100787 3588 SLRRKFQLAHP True H1975_Epitope_Rep3 1351.78368701371 1351.78204490379 18.798 3 -0.1342974362575765 0.031868025230470644 0.9438714419765777 ['PRR11|p.A332S|2|0.48|ENSG00000068489|chr17:59197769-59197769|G/T|missense_variant'] 118834 5018 VEEKEGIPP True H1975_Epitope_Rep1 996.5127762699998 996.51166993586 24.374 2 -0.13431944800311796 0.031868025230470644 0.9438714419765777 ['GMPR2-NEDD8|2|fusion', 'GMPR2-NEDD8|1|fusion', 'ENST00000604306.1_1_14:24684951-24700866:-|nuORF', 'ENST00000560427.1_1_14:24686335-24687646:-|nuORF', 'ENST00000527046.5_1_14:24686335-24700866:-|nuORF', 'ENSG00000129559|ENST00000250495|NEDD8'] 72745 13149 NAAPGVDL True PC9_epitope_Rep3 755.38136817763 755.38026993586 55.608 2 -0.13438540814605263 0.03188681442378605 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7'] 9366 12833 AVTWRARPS True NCI_RA007_Epitope_Rep1 1042.5672118846999 1042.5661099358601 53.907 2 -0.1344065329214402 0.03190250718000466 0.9438714419765777 ['nc|ENSG00000196092|Q02548-5|PAX5', 'nc|ENSG00000196092|Q02548-11|PAX5'] 77423 18489 NYMPGQLTI True PC9_epitope_Rep6 1035.5059170677498 1035.50537496793 83.758 1 -0.1344107895484666 0.03190250718000466 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 39819 11268 HQFESSFEL True NCI_RA007_Epitope_Rep3 1122.4981888350198 1122.49708993586 51.437 2 -0.13442234055300886 0.03190250718000466 0.9438714419765777 ['ENSG00000197442|ENST00000359015|MAP3K5'] 112872 10835 TPPGPLASA True PC9_epitope_Rep2 809.42831837005 809.4272299358599 46.995 2 -0.13445604795684976 0.03190250718000466 0.9438714419765777 ['ENSG00000124875|ENST00000226317|CXCL6'] 125931 9505 VPAAAAVAA True PC9_epitope_Rep3 739.42283906679 739.42229496793 41.509 1 -0.13446534990185466 0.03190250718000466 0.9438714419765777 ['ENSG00000130699|ENST00000252996|TAF4'] 72477 15310 MVADKFTEL True PC9_epitope_Rep4 1052.52123277872 1052.52012993586 66.823 2 -0.13447128320778556 0.03190250718000466 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 136072 5908 YFYKYFRDERR True NCI_RA007_Epitope_Rep1 1641.8052103039297 1641.80356490379 27.032 3 -0.13453170139834142 0.03194069819339064 0.9438714419765777 ['ENSG00000174885|ENST00000534750|NLRP6', 'nc|ENSG00000174885|P59044|NLRP6'] 132236 11498 VYKTIMEQF True NCI_RA007_Epitope_Rep3 1157.57908200801 1157.5779899358602 52.341 2 -0.1346075196739559 0.0319582427817448 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 135648 10145 YEEWNDPPA True H1975_Epitope_Rep2 1119.45090428943 1119.44980993586 44.022 2 -0.13463096789182802 0.0319582427817448 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000534048.1_1_11:44151622-44219579:+|nuORF', 'ENST00000531161.5_1_11:44146432-44228372:+|nuORF', 'ENST00000525559.1_1_11:44148473-44193310:+|nuORF'] 101748 6917 SPHLGPAPA True PC9_epitope_Rep3 845.4395517600899 845.43844993586 31.619 2 -0.1346577086042568 0.0319582427817448 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant', 'IGF2R-SYTL3|1|fusion', 'IGF2R-SYTL3|2|fusion'] 34885 7889 GQVPPGESV True PC9_epitope_Rep3 868.42904664604 868.4279499358599 35.329 2 -0.1346979667940257 0.03199518810997497 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 4758 7702 ALEEEELELAR True NCI_RA007_Epitope_Rep3 1300.6510606479599 1300.64996993586 37.416 2 -0.13472324350985654 0.03199518810997497 0.9438714419765777 ['ENSG00000101004|ENST00000278886|NINL'] 55667 13330 LDATDLPAS True PC9_epitope_Rep1 901.4392769765699 901.43816993586 56.133 2 -0.13475992223866598 0.03199518810997497 0.9438714419765777 ['AluJb_dup56968|chr8:98045693-98046014:+|1.235187719160256|0.0002169198745066|12.48|502.0|24|3|anti-sense'] 29384 7909 FVEQHTPQL True NCI_RA007_Epitope_Rep5 1097.5505587610498 1097.54946993586 37.114 2 -0.1347974547374028 0.03203275062571545 0.9438714419765777 ['ENSG00000168878|ENST00000519937|SFTPB'] 91723 10876 RPHTVLTVI True PC9_epitope_Rep4 1034.6236641316598 1034.6225699358602 49.598 2 -0.13482676960636156 0.03203275062571545 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 84188 6117 QESPPAAAV True H1975_Epitope_Rep3 868.4290466460399 868.4279499358599 28.541 2 -0.13490695374087605 0.03207093244344418 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 140656 21415 YYPNPPLVL True PC9_epitope_Rep2 1074.57498260374 1074.57447496793 87.845 1 -0.13497276363724187 0.0320897115030169 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 3632 20647 AGPVLLEDLS True PC9_epitope_Rep2 1012.54407639828 1012.54296993586 84.855 2 -0.13514568306410318 0.03212789073413006 0.9438714419765777 ['ENST00000586212.1_1_19:3532513-3533660:+|nuORF'] 70764 12225 MEDLGGSLP True H1975_Epitope_Rep2 917.41643335701 917.4158849679301 52.106 1 -0.13518605356674446 0.032146044309936755 0.9438714419765777 ['ENST00000540056.5_1_12:16500716-16500800:+|nuORF'] 135167 19793 YASNFSVI True PC9_epitope_Rep5 899.4388830537499 899.43833496793 81.179 1 -0.13519092486142642 0.032146044309936755 0.9438714419765777 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000511345.5_1_4:845337-845877:-|nuORF', 'ENST00000515868.5_1_4:845337-862348:-|nuORF', 'ENST00000509566.1_1_4:844107-866085:-|nuORF'] 133889 13221 WMWWRRNRRGK True NCI_RA007_Epitope_Rep2 1630.8527867163796 1630.8516899358601 56.059 2 -0.13520293321337828 0.03216482045511863 0.9438714419765777 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3', 'ESYT3-RPN1|1|fusion'] 36984 12257 GVRQQLAL True PC9_epitope_Rep6 883.5239500903898 883.52284993586 58.526 2 -0.13525655066848483 0.0321835958718088 0.9438714419765777 ['nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5'] 2110 6668 AELPSSTPA True H1975_Epitope_Rep2 871.42871229287 871.42816496793 30.556 1 -0.13529784138207593 0.032201745877788554 0.9438714419765777 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'ROBO4|p.I751Sfs*43|2|0.13|ENSG00000154133|chr11:124887162-124887162|G/-|frameshift_variant', 'ROBO4|p.L856Cfs*18|2|0.14|ENSG00000154133|chr11:124886692-124886693|AG/T|frameshift_variant', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000532216.5_1_11:124756354-124763822:-|nuORF', 'ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 41480 15227 IC[Carbamidomethyl]C[Carbamidomethyl]DILDVLDK True H1975_Epitope_Rep3 1362.6523241601196 1362.65122993586 63.975 2 -0.13533918977895965 0.032201745877788554 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF'] 27312 13864 FMCVCCQELVY True H1975_Epitope_Rep2 1336.5324087927202 1336.53130993586 58.473 2 -0.13536360423765625 0.032216769788777466 0.9438714419765777 ['ENSG00000147854|ENST00000276893|UHRF2'] 3376 12906 AGIPQKPQGAP True PC9_epitope_Rep4 1062.5821932425 1062.58108993586 57.523 2 -0.13542849296719572 0.032216769788777466 0.9438714419765777 ['ENSG00000214107|ENST00000397548|MAGEB1'] 31697 10314 GEIGLGTPP True NCI_RA007_Epitope_Rep4 839.43888305375 839.43833496793 46.529 1 -0.13544016900740202 0.032216769788777466 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA'] 96892 6470 SETEATPVP True NCI_RA007_Epitope_Rep3 929.4341915961298 929.43308993586 32.479 2 -0.13545717589210982 0.032216769788777466 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 110220 10298 TIEEVFFKKT True H1975_Epitope_Rep3 1240.6703395405598 1240.66924993586 44.665 2 -0.13545806352745182 0.032216769788777466 0.9438714419765777 ['ENSG00000112333|ENST00000368986|NR2E1', 'nc|ENSG00000112333|Q9Y466-2|NR2E1'] 5833 6557 APGGFVHSA True PC9_epitope_Rep1 841.40825163181 841.40714993586 30.026 2 -0.1354898831858676 0.032216769788777466 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 72679 24676 MYIIPVVLF True PC9_epitope_Rep1 1093.6245756484498 1093.6234699358602 99.801 2 -0.13550415778143857 0.032216769788777466 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10'] 132342 19025 VYLQEFELL True NCI_RA007_Epitope_Rep3 1152.60667665484 1152.60556993586 83.116 2 -0.13559610831927654 0.03225368502715283 0.9438714419765777 ['ENSG00000136051|ENST00000332180|WASHC4'] 98015 5957 SHSSSPTVL True PC9_epitope_Rep1 913.45051036661 913.44940993586 27.728 2 -0.13566797641196718 0.03225368502715283 0.9438714419765777 ['nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2'] 132061 16470 VYIHPSSALF True PC9_epitope_Rep6 1132.59169529704 1132.5905899358602 75.771 2 -0.13570893700162667 0.03225368502715283 0.9438714419765777 ['ENSG00000067596|ENST00000262415|DHX8'] 71959 18860 MPVGLIAGA True PC9_epitope_Rep4 827.4575103233499 827.45640993586 80.631 2 -0.13580806530473752 0.032268698974150134 0.9438714419765777 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF', 'TMEM14B|p.K87I|1|0.27|ENSG00000137210|chr6:10755199-10755199|A/T|missense_variant', 'nc|ENSG00000214881|A8MWL7|TMEM14DP'] 48281 9018 KDLEALLNSK True NCI_RA007_Epitope_Rep2 1129.63428838501 1129.63264490379 39.678 3 -0.13581465015419394 0.032268698974150134 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 117739 20543 VALGALVTV True PC9_epitope_Rep4 841.52730413533 841.5267549679301 87.169 1 -0.1358331925801919 0.032268698974150134 0.9438714419765777 ['ENSG00000129473|ENST00000250405|BCL2L2'] 92645 17039 RRFMQTFVL True PC9_epitope_Rep4 1196.64883333368 1196.64718490379 73.532 3 -0.13590062379293222 0.032268698974150134 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 113437 11901 TQNEVAAAL True PC9_epitope_Rep4 915.4661604307498 915.46506993586 53.555 2 -0.13590553494619578 0.032268698974150134 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 33245 8330 GLAEVAAAV True NCI_RA007_Epitope_Rep4 799.4439684341899 799.44341496793 38.854 1 -0.1359110702381803 0.032268698974150134 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 61283 9898 LLDTHRGLLY True H1975_Epitope_Rep3 1199.6662572196299 1199.6646149037902 43.104 3 -0.13591272840155094 0.032268698974150134 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 62073 7586 LLNAAAGK True NCI_RA007_Epitope_Rep1 756.4493881678 756.44828993586 33.501 2 -0.1361531237544193 0.0323637773899554 0.9438714419765777 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4'] 1228 14957 AEDGFFVPP True H1975_Epitope_Rep3 977.4494477374499 977.4488949679301 62.919 1 -0.13616647805358423 0.0323637773899554 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 6456 8513 APSRGFVV True PC9_epitope_Rep4 831.4602872046698 831.45918993586 40.221 2 -0.13617740563569247 0.0323637773899554 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169181-242169382:-|nuORF'] 132691 14366 VYSDYLQTI True NCI_RA007_Epitope_Rep4 1100.53899101784 1100.5378899358602 62.565 2 -0.13627940505160277 0.03240193131798879 0.9438714419765777 ['ENSG00000179715|ENST00000546455|PCED1B'] 27573 19359 FPQCGHTWFL True PC9_epitope_Rep6 1234.5593496229399 1234.5582499358602 87.112 2 -0.1362856078476914 0.03241755045853772 0.9438714419765777 ['ENST00000497543.5_1_3:75471615-75471942:-|nuORF'] 63589 18510 LPLLPAPGAAA True PC9_epitope_Rep6 989.5909670210498 989.58986993586 83.841 2 -0.13633243379030535 0.03241755045853772 0.9438714419765777 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 90073 9915 RGNDSILV True PC9_epitope_Rep5 872.4715801643599 872.47048993586 43.11 2 -0.1364200962421121 0.03241755045853772 0.9438714419765777 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant'] 126873 14881 VPTNIIAA True PC9_epitope_Rep5 797.4647038787699 797.46360993586 62.244 2 -0.13645615739045341 0.03241755045853772 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 95020 17315 RYQQWMERF True PC9_epitope_Rep3 1342.6240751378198 1342.62296993586 71.777 2 -0.1365267640264869 0.03241755045853772 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 68040 14828 LTNGHLLSL True PC9_epitope_Rep4 966.54983048506 966.54872993586 64.976 2 -0.13658422407480247 0.03241755045853772 0.9438714419765777 ['UNC5A|p.P402L|1|0.29|ENSG00000113763|chr5:176874393-176874393|C/T|missense_variant'] 57020 13236 LEEELKTFKRI True NCI_RA007_Epitope_Rep1 1404.7976653119997 1404.7965699358601 55.484 2 -0.13667166693429844 0.03245569816588468 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 73021 12854 NDEELNKLLGK True PC9_epitope_Rep4 1271.6721304457099 1271.67049490379 57.308 3 -0.13671259681015965 0.03247319749520172 0.9438714419765777 ['ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 140454 15197 YYGQGFPSF True NCI_RA007_Epitope_Rep3 1064.4603467743198 1064.45924993586 67.299 2 -0.1367281360061061 0.03247319749520172 0.9438714419765777 ['ENSG00000147459|ENST00000276440|DOCK5', 'ENST00000467709.6_1_8:25227083-25246387:+|nuORF', 'ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF'] 112854 6000 TPNEIKVSA True PC9_epitope_Rep6 957.51311062317 957.51200993586 31.402 2 -0.13672938121598766 0.03247319749520172 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 90754 7784 RKREIEELL True NCI_RA007_Epitope_Rep4 1184.6877209401998 1184.68606490379 36.623 3 -0.1369324255217982 0.032586992342735294 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 86578 9078 QRDEKVLEL True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 40.262 2 -0.13694284348656022 0.032586992342735294 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 25087 13679 FDIAEGVRTVL True H1975_Epitope_Rep1 1218.66083748602 1218.6597499358602 57.752 2 -0.136982451771206 0.032586992342735294 0.9438714419765777 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 4195 9508 AIDNPLHY True H1975_Epitope_Rep2 941.46068112749 941.45958993586 41.542 2 -0.13700699275126949 0.032586992342735294 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1', 'CNOT1-GOT2|1|fusion'] 5658 9420 APAKSLVGQVA True PC9_epitope_Rep5 1039.6025943339098 1039.6014899358602 41.189 2 -0.13713980840839365 0.03260511369143389 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 93819 12145 RVDEGGWNTV True PC9_epitope_Rep5 1131.53088594563 1131.5297899358602 51.706 2 -0.13718373495434938 0.03260511369143389 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 46544 20583 ITQTLFHIS True PC9_epitope_Rep5 1058.5760452329 1058.57494993586 84.22 2 -0.1372086306897006 0.03262323363507724 0.9438714419765777 ['ENST00000457388.1_1_10:37627086-37627398:+|nuORF'] 52531 5106 KPPPPPPPP True PC9_epitope_Rep5 922.5276384884999 922.52654993586 24.666 2 -0.13721495549942833 0.03262323363507724 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 73903 10918 NHHMQSISF True PC9_epitope_Rep3 1099.4869129586702 1099.48580993586 46.977 2 -0.13727857604942306 0.03265946930785184 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'nc|ENSG00000185634|Q6S5L8-2|SHC4', 'ENSG00000185634|ENST00000332408|SHC4'] 130593 5326 VVAAHLAGA True PC9_epitope_Rep6 807.46028720467 807.45918993586 28.318 2 -0.13729299995203204 0.03265946930785184 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 67403 5854 LTEAAPPAPP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 27.531 2 -0.13738520617718242 0.03265946930785184 0.9438714419765777 ['ENSG00000188766|ENST00000691638|SPRED3'] 35998 15538 GVCSPTDIGV True PC9_epitope_Rep4 946.4429824580199 946.44188993586 67.691 2 -0.1374078558792062 0.03265946930785184 0.9438714419765777 ['ENST00000564439.5_1_15:66795703-66797150:-|nuORF'] 69529 6388 LVSWGAGC[Carbamidomethyl]QKS True H1975_Epitope_Rep3 1191.57064286206 1191.56954993586 29.548 2 -0.137418905164671 0.03267631839060411 0.9438714419765777 ['nc|ENSG00000283706|Q9UI38|PRSS50'] 132915 17502 VYTVVDEMF True NCI_RA007_Epitope_Rep2 1101.5052483614097 1101.50467496793 72.81 1 -0.13742735851218538 0.03267631839060411 0.9438714419765777 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 137574 15600 YLSPDLSKV True PC9_epitope_Rep1 1020.54916177872 1020.54806993586 64.825 2 -0.13743910848450402 0.03267631839060411 0.9438714419765777 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'ENST00000445336.2_1_X:74804463-74804925:+|nuORF', 'ENST00000479537.5_1_7:140434399-140447180:-|nuORF'] 102095 8813 SPPVPGPSA True PC9_epitope_Rep3 807.41266830591 807.41156993586 38.849 2 -0.13745322237006719 0.03267631839060411 0.9438714419765777 ['ENSG00000143756|ENST00000366862|FBXO28'] 82437 17330 PVCPPGGIQEV True PC9_epitope_Rep5 1094.5430308524599 1094.54192993586 71.659 2 -0.13749284556040223 0.03269506570022094 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'CON__Q922U2'] 82426 7478 PVCDQPECPK True NCI_RA007_Epitope_Rep5 1114.4787163437397 1114.47760993586 35.446 2 -0.13755601712304474 0.03273002092861019 0.9438714419765777 ['nc|ENSG00000174453|B2RUY7-2|VWC2L', 'ENSG00000174453|ENST00000312504|VWC2L'] 109517 6978 THADSLNNL True PC9_epitope_Rep4 983.46722305991 983.46612993586 34.084 2 -0.13759468265515204 0.03273002092861019 0.9438714419765777 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT'] 32913 23023 GIPDYFDIV True PC9_epitope_Rep2 1037.5069626135698 1037.5058699358601 94.05 2 -0.13760520073937824 0.03273002092861019 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP', 'ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 9525 14466 AYAENIALL True NCI_RA007_Epitope_Rep3 976.5229470308799 976.52184993586 64.205 2 -0.13761600172050495 0.03273002092861019 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 76274 10711 NSDPGLAVGY True H1975_Epitope_Rep1 991.46107505031 991.45996993586 46.16 2 -0.13762249790830922 0.03273002092861019 0.9438714419765777 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 26194 9083 FHSNDGGNVL True PC9_epitope_Rep3 1058.47812209678 1058.4770299358602 39.877 2 -0.13765420123976496 0.03273002092861019 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 27162 13497 FLSEKLERI True PC9_epitope_Rep5 1133.6444591458899 1133.64280490379 56.935 3 -0.13766202437798705 0.03274368860558387 0.9438714419765777 ['ENSG00000183291|ENST00000331835|SELENOF'] 76708 14494 NTPAQFASV True PC9_epitope_Rep1 933.4555957470499 933.45448993586 60.576 2 -0.1377507894039399 0.03274368860558387 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB', 'nc|ENSG00000186260|Q9ULH7-2|MRTFB', 'nc|ENSG00000186260|Q9ULH7-3|MRTFB'] 22766 11812 EVCRRSAFPKA True H1975_Epitope_Rep1 1262.6553752661 1262.6542699358602 50.429 2 -0.13776094307919823 0.03274368860558387 0.9438714419765777 ['ENSG00000249156|ENST00000503184|TAF11L12', 'ENSG00000284373|ENST00000639081|TAF11L2', 'ENSG00000283740|ENST00000510838|TAF11L11'] 28959 14259 FTETDDPEEYY True H1975_Epitope_Rep2 1407.53542175903 1407.5343299358601 59.997 2 -0.13776918271645652 0.03274368860558387 0.9438714419765777 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 88045 12021 QVVAIPQNLQ True H1975_Epitope_Rep3 1108.62405805448 1108.62296993586 51.4 2 -0.13789519768051828 0.03274368860558387 0.9438714419765777 ['ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 26112 14358 FHFTNRDCDSL True PC9_epitope_Rep1 1353.57718451505 1353.5755349037902 60.052 3 -0.137951890817726 0.03274368860558387 0.9438714419765777 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF'] 70382 20768 LYQEIIHYF True PC9_epitope_Rep2 1224.61791004488 1224.6168099358601 85.327 2 -0.13796199251923605 0.03274368860558387 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 47695 19066 IYPTTYVQF True PC9_epitope_Rep6 1130.56481184286 1130.56427496793 85.982 1 -0.1380255062854039 0.03274368860558387 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM'] 127329 7396 VQNGKVIGV True PC9_epitope_Rep3 912.5392658013598 912.53816993586 33.458 2 -0.1380384882642043 0.03274368860558387 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 6244 14311 APRLLLAA True PC9_epitope_Rep3 823.5279728416699 823.52686993586 60.134 2 -0.13808577940840683 0.032759889960866366 0.9438714419765777 ['ENST00000552138.5_1_14:105821400-105836438:+|nuORF'] 98017 6031 SHSSSPTVL True PC9_epitope_Rep5 913.45051036661 913.44940993586 28.191 2 -0.13809412382154643 0.032759889960866366 0.9438714419765777 ['nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2'] 84851 10598 QHQEHFIQM True PC9_epitope_Rep3 1196.5396768075198 1196.53804490379 45.712 3 -0.13809502658700512 0.032759889960866366 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 14514 9200 DTYLSHFNPR True NCI_RA007_Epitope_Rep2 1248.58873517492 1248.5870849037901 40.396 3 -0.13810400323547284 0.032759889960866366 0.9438714419765777 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 65578 15121 LSGGYWNSV True PC9_epitope_Rep5 981.45559574705 981.45448993586 63.169 2 -0.1381136041225007 0.032759889960866366 0.9438714419765777 ['ENSG00000177189|ENST00000379565|RPS6KA3'] 91514 5897 RPAAGFVA True PC9_epitope_Rep4 787.4340724568299 787.43296993586 29.583 2 -0.13811810237177874 0.0327786280245646 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 9541 11059 AYAGSGNVL True PC9_epitope_Rep4 850.41848196234 850.41793496793 50.315 1 -0.1381622362040749 0.03279673001297921 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 65863 10973 LSKTSVVDL True PC9_epitope_Rep1 960.54916177872 960.54806993586 47.097 2 -0.13818268814198592 0.03279673001297921 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4'] 96200 6381 SEEHNTWEP True H1975_Epitope_Rep3 1127.45196691859 1127.45086993586 29.522 2 -0.13818631142261437 0.03281546627406919 0.9438714419765777 ['ENSG00000094916|ENST00000209875|CBX5'] 131964 14262 VYGDFQEAF True NCI_RA007_Epitope_Rep3 1074.4658260775798 1074.46472993586 63.417 2 -0.13825053111165467 0.03283102192608662 0.9438714419765777 ['nc|ENSG00000112773|Q96IP4-2|TENT5A', 'ENSG00000112773|ENST00000320172|TENT5A'] 22085 16791 ESTGVLLELL True PC9_epitope_Rep6 1072.6015912743999 1072.6004899358602 77.09 2 -0.1382679739252063 0.03283102192608662 0.9438714419765777 ['PLAG1|p.H168L|1|0.28|ENSG00000181690|chr8:56167243-56167243|T/A|missense_variant'] 118852 4505 VEEKPPPAP True H1975_Epitope_Rep2 962.5072969667398 962.50618993586 22.44 2 -0.13827445370596353 0.03283102192608662 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 34090 11046 GPAAAFTAA True PC9_epitope_Rep4 775.38645355807 775.38534993586 50.264 2 -0.1383113782573296 0.03283102192608662 0.9438714419765777 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 101458 4044 SNNKYAASSY True NCI_RA007_Epitope_Rep4 1103.48835242731 1103.48724993586 21.815 2 -0.13832626253446081 0.03283102192608662 0.9438714419765777 ['HMCN1-IGLL5|1|fusion', 'nc|ENSG00000222037|P0CF74|IGLC6', 'nc|ENSG00000211685|A0M8Q6|IGLC7', 'nc|ENSG00000211679|P0DOY3|IGLC3', 'nc|ENSG00000211677|P0DOY2|IGLC2', 'nc|ENSG00000211675|P0CG04|IGLC1', 'nc|ENSG00000254709|B9A064|IGLL5', 'ENSG00000128322|ENST00000330377|IGLL1'] 38307 8692 HFQKSYTL True PC9_epitope_Rep5 1022.5185303567799 1022.5174299358599 38.375 2 -0.1383287977926348 0.03283102192608662 0.9438714419765777 ['nc|ENSG00000100360|Q9BW83-2|IFT27', 'ENSG00000100360|ENST00000433985|IFT27', 'ENST00000465023.1_1_22:37163271-37171742:-|nuORF', 'ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 55516 14694 LAVVAGVAAE True PC9_epitope_Rep6 898.5123823471799 898.51128993586 68.455 2 -0.138394658178743 0.03288849290127641 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 67291 15151 LTDPDIHVL True PC9_epitope_Rep6 1021.5444107514501 1021.54330993586 70.353 2 -0.13846691485509457 0.032907224481890374 0.9438714419765777 ['nc|ENSG00000091157|Q9Y4E6-2|WDR7', 'ENSG00000091157|ENST00000254442|WDR7'] 48294 16696 KDLNFQGKTI True PC9_epitope_Rep5 1162.63462273818 1162.63352993586 69.225 2 -0.13847437445573135 0.032925317632475984 0.9438714419765777 ['ENST00000498783.5_1_9:130687427-130690958:-|nuORF', 'nc|ENSG00000167103|Q5T9C9-2|PIP5KL1', 'ENST00000464759.5_1_9:130684128-130689655:-|nuORF', 'ENSG00000167103|ENST00000388747|PIP5KL1'] 32352 16083 GGDDSFNTF True PC9_epitope_Rep4 958.3668403123 958.36574993586 69.797 2 -0.13848237835058133 0.032925317632475984 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 135109 11061 YANQSGVI True PC9_epitope_Rep4 850.4184819623399 850.41738993586 50.323 2 -0.13853946565569672 0.03294021960146401 0.9438714419765777 ['nc|ENSG807|P61550|ERVS71-1'] 37521 18951 GYISSAFLF True NCI_RA007_Epitope_Rep4 1003.5014833103099 1003.50097496793 81.967 1 -0.13854099901482728 0.03294021960146401 0.9438714419765777 ['nc|ENSG00000131471|Q16853-2|AOC3', 'ENSG00000131471|ENST00000308423|AOC3'] 10782 6071 DAAENGQMEVP True H1975_Epitope_Rep2 1159.4815527947098 1159.47991490379 28.329 3 -0.1385674342832859 0.03294021960146401 0.9438714419765777 ['nc|ENSG00000144488|Q6ZVH7-2|ESPNL'] 126696 5080 VPRPETAVA True PC9_epitope_Rep6 938.5185303567798 938.51742993586 27.202 2 -0.1385747211154507 0.03294021960146401 0.9438714419765777 ['ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 117208 15390 TYTLRVFEL True NCI_RA007_Epitope_Rep4 1140.61791004488 1140.6168099358601 66.871 2 -0.13858276730237515 0.03294021960146401 0.9438714419765777 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 12 4594 AAAAAAAKVPA True PC9_epitope_Rep5 910.5236157372199 910.52250993586 22.73 2 -0.13859533883857914 0.03294021960146401 0.9438714419765777 ['ENSG00000188846|ENST00000396203|RPL14'] 107515 14711 TAAPTVCLL True H1975_Epitope_Rep2 887.4786396907499 887.47809496793 61.747 1 -0.13863091553787732 0.03294021960146401 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 135489 6047 YEDGGKPPVP True H1975_Epitope_Rep3 1057.50802524273 1057.5069299358602 28.273 2 -0.13866248021765462 0.032978311386522074 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 85581 21588 QLLNWVYLSL True PC9_epitope_Rep4 1247.69140933831 1247.6903099358601 91.22 2 -0.1387555635990687 0.03299384269836967 0.9438714419765777 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 48386 6256 KEAPSPFQA True H1975_Epitope_Rep3 973.4868958753299 973.4863449679301 29.075 1 -0.13876223942833768 0.03299384269836967 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 13998 9122 DRSVPVRL True PC9_epitope_Rep5 940.5454138109599 940.54430993586 40.034 2 -0.13878529164220008 0.03299384269836967 0.9438714419765777 ['ENST00000507678.5_1_4:177241188-177241371:+|nuORF', 'ENST00000513139.1_1_4:177241188-177248429:+|nuORF', 'ENSG00000129128|ENST00000503362|SPCS3'] 73760 15990 NHASLISAL True PC9_epitope_Rep1 924.50288029264 924.5023349679301 66.316 1 -0.1388209678257089 0.03299384269836967 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 41838 3201 IDSYRCFQPKQ True NCI_RA007_Epitope_Rep1 1383.6605202161898 1383.65887490379 16.345 3 -0.13884328124233816 0.03299384269836967 0.9438714419765777 ['APEX2|p.L464Cfs*14|3|0.13|ENSG00000169188|chrX:55007261-55007261|G/-|frameshift_variant', 'ENSG00000169188|ENST00000374987|APEX2'] 46959 16538 IVMQEVETV True PC9_epitope_Rep4 1046.53179746242 1046.5307099358602 71.587 2 -0.1388574151262595 0.03299384269836967 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 80765 14682 PLSIAVEAA True H1975_Epitope_Rep2 869.4858332461699 869.48528496793 61.636 1 -0.1388878345173626 0.033031928282378456 0.9438714419765777 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000466876.1_1_3:195006441-195012466:-|nuORF'] 91460 4358 RNRKSWRKQGP True H1975_Epitope_Rep3 1411.79089765247 1411.78924490379 21.881 3 -0.13892705365951566 0.03305065055762082 0.9438714419765777 ['ENST00000542357.1_1_12:6747897-6752833:-|nuORF'] 37483 14495 GYEPPVQESV True PC9_epitope_Rep1 1103.51350454599 1103.51297496793 60.58 1 -0.13902361173916494 0.03311976152223147 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 3857 7941 AHATPLPVT True PC9_epitope_Rep2 905.4970666362101 905.49596993586 35.911 2 -0.13904322487532925 0.03311976152223147 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 9146 12473 AVMGAYVLLK True NCI_RA007_Epitope_Rep4 1063.60998821347 1063.6088899358601 54.987 2 -0.13905362059098353 0.03311976152223147 0.9438714419765777 ['ENSG00000166562|ENST00000587834|SEC11C', 'ENST00000591406.1_1_18:56822908-56825914:+|nuORF'] 29010 19510 FTIRDLQRL True PC9_epitope_Rep1 1160.6665915728 1160.66494490379 79.863 3 -0.13906290345761463 0.03311976152223147 0.9438714419765777 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF'] 75699 18732 NQVALPNI True PC9_epitope_Rep5 867.48141657207 867.48030993586 77.067 2 -0.13912841489859107 0.03311976152223147 0.9438714419765777 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 76988 8528 NVSIGIVGK True NCI_RA007_Epitope_Rep2 885.52836676449 885.52726993586 37.817 2 -0.13915391338789002 0.03311976152223147 0.9438714419765777 ['ENSG00000129084|ENST00000396394|PSMA1', 'nc|ENSG00000129084|P25786-2|PSMA1'] 26457 12247 FINNIALAQIK True H1975_Epitope_Rep1 1243.72885747619 1243.7277699358601 52.131 2 -0.13916656758259327 0.03311976152223147 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 20273 16008 ENYTAVAQTV True PC9_epitope_Rep2 1094.5244035828598 1094.5233099358602 66.83 2 -0.13917761848133886 0.03311976152223147 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'nc|ENSG00000101158|Q8IXH7-3|NELFCD', 'ENST00000482747.1_1_20:57556337-57564148:+|nuORF'] 129416 6277 VTEIDQDKY True H1975_Epitope_Rep3 1109.5240692296898 1109.5229699358601 29.152 2 -0.13918492995914852 0.03311976152223147 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 37399 10672 GVYNGKTFNQV True PC9_epitope_Rep2 1225.60913626633 1225.60802993586 46.362 2 -0.13921653472624948 0.03311976152223147 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 38074 7371 HEMVVYEA True NCI_RA007_Epitope_Rep4 976.4324177743199 976.43132993586 34.993 2 -0.13922967925815738 0.03311976152223147 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 22662 12379 ETSFPQQTV True PC9_epitope_Rep1 1035.48728979815 1035.48618993586 52.475 2 -0.13925548077099298 0.03311976152223147 0.9438714419765777 ['chr10:5003925-5007407|204|71.68|0.1|9.54|-|0|None,AKR1C2|1'] 41284 19458 IAGPGLPDL True PC9_epitope_Rep1 851.47526856247 851.47472496793 79.661 1 -0.1392638051258781 0.03311976152223147 0.9438714419765777 ['nc|ENSG00000284922|Q8WZ04-2|TOMT', 'nc|ENSG00000284922|Q8WZ04|TOMT'] 102373 13509 SPVPIAPTA True PC9_epitope_Rep3 851.47526856247 851.47416993586 57.013 2 -0.1392997404447016 0.033138477023731176 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 1827 12002 AEIEDPPIP True H1975_Epitope_Rep2 979.4862271689899 979.48512993586 51.248 2 -0.13933510795570703 0.03315719180070844 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 118935 16520 VEERNLLSV True PC9_epitope_Rep6 1057.57677350889 1057.57566993586 75.981 2 -0.13943241000519435 0.033193976696473504 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 115099 6226 TTVGKGVTTV True PC9_epitope_Rep3 961.54441075145 961.54330993586 28.986 2 -0.13944343608932425 0.033193976696473504 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2'] 55082 19235 LALLAALL True H1975_Epitope_Rep3 796.54222592348 796.54167496793 80.657 1 -0.1394911234208827 0.033193976696473504 0.9438714419765777 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1', 'ROR1-PGM1|1|fusion'] 38116 8791 HEPEPHIL True PC9_epitope_Rep5 970.4872302285 970.48612993586 38.757 2 -0.13957786538004643 0.03321204614074476 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 18134 11593 EIMMEGCEY True H1975_Epitope_Rep2 1103.3973547885498 1103.3962499358602 49.658 2 -0.1396950912764236 0.03321204614074476 0.9438714419765777 ['nc|ENSG00000090989|Q9NV70-2|EXOC1', 'ENSG00000090989|ENST00000381295|EXOC1', 'ENST00000505501.1_1_4:56724546-56734701:+|nuORF'] 102302 6566 SPVFRTGSE True PC9_epitope_Rep2 978.4770594676199 978.47596993586 30.669 2 -0.13981214950539364 0.033263027535362526 0.9438714419765777 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 102298 18744 SPVFFASPSP True PC9_epitope_Rep3 1034.50729696674 1034.5061899358602 77.321 2 -0.13982975056647778 0.033263027535362526 0.9438714419765777 ['nc|ENSG00000065989|P27815-2|PDE4A'] 114828 17328 TTDFIYQLY True H1975_Epitope_Rep3 1162.55464108198 1162.5540749679299 72.306 1 -0.1398462916573256 0.033263027535362526 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 119702 13813 VETDQRKM True H1975_Epitope_Rep3 1005.4913296327699 1005.49022993586 58.438 2 -0.1399371286211416 0.033263027535362526 0.9438714419765777 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 30115 18600 FYPPPRITL True PC9_epitope_Rep4 1102.61751612206 1102.61640993586 79.622 2 -0.1400000911153107 0.033263027535362526 0.9438714419765777 ['ENSG00000102221|ENST00000614628|JADE3'] 104259 16687 SSDSTFLVL True NCI_RA007_Epitope_Rep5 967.4862271689899 967.48512993586 70.953 2 -0.14000384813165792 0.033263027535362526 0.9438714419765777 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF'] 45750 11551 ISNEFKVEV True PC9_epitope_Rep3 1063.5549754351498 1063.5538699358601 49.443 2 -0.1400304204460952 0.033263027535362526 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 6706 5167 AQDEERQASL True PC9_epitope_Rep1 1145.53127986845 1145.53018993586 24.728 2 -0.1400741145683771 0.033263027535362526 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT'] 38283 18682 HFIAEHYMF True PC9_epitope_Rep1 1193.53280052193 1193.5317099358601 76.651 2 -0.14007510956844693 0.033263027535362526 0.9438714419765777 ['ENSG00000143753|ENST00000323699|DEGS1', 'ENST00000498813.1_1_1:224377853-224378832:+|nuORF'] 22387 6889 ETERRMDFY True H1975_Epitope_Rep3 1245.54482175761 1245.54316490379 31.458 3 -0.14008283904089647 0.033263027535362526 0.9438714419765777 ['nc|ENSG00000180354|Q8N3F0-4|MTURN', 'nc|ENSG00000180354|Q8N3F0-2|MTURN', 'ENSG00000180354|ENST00000324453|MTURN'] 81855 21134 PSIFVAGLV True PC9_epitope_Rep4 901.5273041353298 901.5267549679301 89.454 1 -0.14008589838063445 0.033263027535362526 0.9438714419765777 ['ENSG00000158683|ENST00000289672|PKD1L1'] 33246 8135 GLAEVAAAV True NCI_RA007_Epitope_Rep5 799.4439684341899 799.44286993586 37.974 2 -0.1401002629067619 0.033279801869086544 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 131607 14877 VVYGGGAAEI True PC9_epitope_Rep3 934.4759968384599 934.47488993586 62.361 2 -0.14012677976823687 0.033279801869086544 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 116362 17939 TVYEGFISA True PC9_epitope_Rep6 985.4756624852898 985.47511496793 81.629 1 -0.140179729679249 0.033279801869086544 0.9438714419765777 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL', 'ENST00000417361.1_3_2:58431301-58468472:-|nuORF'] 47858 12708 IYTHQSDVW True PC9_epitope_Rep5 1147.5298233164701 1147.5287299358602 53.886 2 -0.14020483083817334 0.033279801869086544 0.9438714419765777 ['nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'BAG4-FGFR1|1|fusion', 'BAG4-FGFR1|2|fusion', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-3|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion', 'ENSG00000146648|ENST00000275493|EGFR'] 66952 4725 LSYRHFQFRR True NCI_RA007_Epitope_Rep1 1408.7476358581596 1408.74598490379 22.46 3 -0.14022013580471598 0.03331785465521245 0.9438714419765777 ['ENST00000581475.5_1_18:690653-693903:-|nuORF'] 101931 18032 SPLPGLASV True PC9_epitope_Rep6 839.47526856247 839.47416993586 81.989 2 -0.14024085618804705 0.033335268055797396 0.9438714419765777 ['FOSL2|p.E197Afs*60|1|0.34|ENSG00000075426|chr2:28412057-28412061|AGCGC/-|frameshift_variant', 'nc|ENSG00000075426|P15408-3|FOSL2', 'nc|ENSG00000075426|P15408-2|FOSL2', 'ENSG00000075426|ENST00000264716|FOSL2'] 37551 7009 GYPGGIHEV True NCI_RA007_Epitope_Rep5 927.4450310633499 927.44392993586 33.639 2 -0.14025025017032514 0.033335268055797396 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 18985 18748 ELGASLVTV True PC9_epitope_Rep1 887.49639792987 887.4958449679301 76.902 1 -0.14026959836009542 0.033335268055797396 0.9438714419765777 ['ENST00000432031.6_1_2:179315212-179315317:-|nuORF'] 111755 10386 TLQKEGVIGV True PC9_epitope_Rep4 1042.6022599807397 1042.60116993586 47.651 2 -0.1402995199279908 0.03335396997368829 0.9438714419765777 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 63915 20395 LPWAPAGVAA True PC9_epitope_Rep3 951.5178020807898 951.51670993586 83.7 2 -0.14040730691390893 0.03337267116794676 0.9438714419765777 ['nc|ENSG00000166448|Q8N3G9-3|TMEM130', 'ENSG00000166448|ENST00000339375|TMEM130', 'nc|ENSG00000166448|Q8N3G9|TMEM130'] 55681 23707 LDAYSTLIF True PC9_epitope_Rep5 1041.53826274185 1041.53767496793 96.169 1 -0.1404830917877586 0.03343006384213581 0.9438714419765777 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 5017 23545 ALLDWVTSV True PC9_epitope_Rep5 1002.53859709502 1002.53750993586 95.55 2 -0.14052708005169837 0.03344876284072663 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1-LYPLA1|1|fusion', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 140351 5542 YYEHVKARF True PC9_epitope_Rep4 1211.60874234351 1211.60710490379 28.081 3 -0.14053532572905741 0.03346746111583997 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 4293 3214 AIIWEGNECKK True NCI_RA007_Epitope_Rep2 1289.6438075228896 1289.64217490379 17.152 3 -0.1405485482743504 0.033484863139568624 0.9438714419765777 ['ENSG00000116793|ENST00000369604|PHTF1', 'PHTF1|p.S622Ffs*15|1|0.3|ENSG00000116793|chr1:113704106-113704107|-/A|frameshift_variant', 'nc|ENSG00000116793|Q9UMS5-2|PHTF1'] 90314 10263 RIAGIRGIQGV True PC9_epitope_Rep4 1138.69347502698 1138.69183490379 47.16 3 -0.14062016395381388 0.033484863139568624 0.9438714419765777 ['nc|ENSG00000132294|Q14156-3|EFR3A', 'nc|ENSG00000132294|Q14156-2|EFR3A', 'EFR3A|p.L782Wfs*15|1|0.42|ENSG00000132294|chr8:132003268-132003268|A/-|frameshift_variant', 'ENSG00000132294|ENST00000254624|EFR3A'] 5152 17805 ALNSQAQVI True PC9_epitope_Rep3 942.5134449763399 942.51234993586 73.684 2 -0.14062751550235514 0.033484863139568624 0.9438714419765777 ['chr7:76490750-76492153|119|16.92|0.97|4.13|+|0|TE_info:AluJo,AluJo_dup29597,Alu,SINE,donor,-,76490617,76490750|None,DTX2|2'] 71808 10766 MNVAEVDKV True PC9_epitope_Rep3 1003.5008316873099 1003.49972993586 46.366 2 -0.14069802200158704 0.033500967117988396 0.9438714419765777 ['ENSG00000171858|ENST00000343986|RPS21'] 19128 16872 ELILWEDESY True H1975_Epitope_Rep2 1295.59214878951 1295.5910499358602 70.144 2 -0.14070802065746824 0.033500967117988396 0.9438714419765777 ['ENST00000448841.5_1_10:104573393-104573648:+|nuORF'] 115452 8379 TVFPSREFWHR True NCI_RA007_Epitope_Rep1 1460.73131708768 1460.72968490379 36.594 3 -0.14072489257917623 0.033500967117988396 0.9438714419765777 ['ENST00000476826.5_1_6:160210904-160219152:+|nuORF', 'ENSG00000112110|ENST00000367034|MRPL18'] 119347 8503 VENAYYYCNP True H1975_Epitope_Rep1 1234.49647458286 1234.49536993586 37.637 2 -0.14073866612370475 0.033500967117988396 0.9438714419765777 ['ENSG00000151461|ENST00000357604|UPF2'] 105490 13821 SVCPEEESI True PC9_epitope_Rep5 991.4168272798299 991.41572993586 58.181 2 -0.14074272971070542 0.033500967117988396 0.9438714419765777 ['NCKAP1L|p.G924Dfs*20|1|0.23|ENSG00000123338|chr12:54531813-54531813|G/-|frameshift_variant', 'NCKAP1L|p.N982Ifs*2|1|0.16|ENSG00000123338|chr12:54535185-54535185|A/-|frameshift_variant', 'nc|ENSG00000123338|P55160-2|NCKAP1L', 'ENSG00000123338|ENST00000293373|NCKAP1L'] 28669 17825 FSSPPVILL True H1975_Epitope_Rep3 971.5691689473099 971.5686249679301 74.579 1 -0.14078383249368928 0.03351901280414684 0.9438714419765777 ['ENSG00000171867|ENST00000379440|PRNP'] 5574 7223 ANPEDC[Carbamidomethyl]VAFGK True H1975_Epitope_Rep1 1206.5339230001698 1206.53282993586 32.795 2 -0.140802107389467 0.03351901280414684 0.9438714419765777 ['ENSG00000008394|ENST00000396210|MGST1', 'nc|ENSG00000008394|P10620-2|MGST1', 'ENST00000539708.5_1_12:16507186-16513330:+|nuORF', 'ENST00000539036.5_1_12:16500588-16536519:+|nuORF', 'ENST00000538857.1_1_12:16507186-16536519:+|nuORF'] 79269 8028 PGHLQEGF True PC9_epitope_Rep2 883.41881631551 883.41770993586 36.241 2 -0.14086584047323567 0.033535759873128845 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 126695 5001 VPRPETAVA True PC9_epitope_Rep6 938.5185303567798 938.51742993586 26.844 2 -0.140883702511458 0.033535759873128845 0.9438714419765777 ['ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 101951 9518 SPLSTPTSA True PC9_epitope_Rep3 859.42871229287 859.42760993586 41.558 2 -0.14090793668845114 0.033535759873128845 0.9438714419765777 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'ENSG00000167775|ENST00000301458|CD320', 'nc|ENSG00000167775|Q9NPF0-2|CD320'] 35870 8534 GVADTTTVEPG True H1975_Epitope_Rep3 1045.49276910141 1045.49166993586 37.813 2 -0.14094345496718733 0.033535759873128845 0.9438714419765777 ['ENST00000529560.1_2_1:207095210-207096574:-|nuORF'] 105040 6152 STIPPELVKQK True NCI_RA007_Epitope_Rep4 1238.72343774258 1238.7217949037902 30.275 3 -0.14106964819400594 0.03355315322284322 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 29044 21922 FTLVSLSLTL True PC9_epitope_Rep3 1092.64306216356 1092.64196993586 89.622 2 -0.1410815085172281 0.03355315322284322 0.9438714419765777 ['ENST00000544451.2_1_8:52730731-52730815:-|nuORF'] 23673 20961 EYGSIIAFF True NCI_RA007_Epitope_Rep5 1045.51204799401 1045.5114749679299 87.634 1 -0.14113920401171579 0.03355315322284322 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 81119 4777 PPHPPPPPP True NCI_RA007_Epitope_Rep2 931.49158733295 931.49048993586 23.212 2 -0.14127201806667142 0.033589882425742575 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 108272 5792 TEAREAALP True H1975_Epitope_Rep3 956.4927095317598 956.49160993586 27.303 2 -0.14128406530366647 0.033589882425742575 0.9438714419765777 ['ENST00000314845.7_1_11:46418495-46418936:-|nuORF'] 32993 21350 GIVFVVDSV True PC9_epitope_Rep5 933.5171333744499 933.51602993586 87.181 2 -0.1412990722315696 0.033589882425742575 0.9438714419765777 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 77313 12981 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.60641490379 55.22 3 -0.1413075773326061 0.03360532116477822 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 5615 9546 APAASYGVGA True PC9_epitope_Rep5 862.4184819623399 862.41738993586 41.676 2 -0.1413955389648778 0.03360532116477822 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 20633 16828 EQFHQFLEA True PC9_epitope_Rep3 1147.52982331647 1147.5287299358602 69.88 2 -0.14141366940294683 0.03360532116477822 0.9438714419765777 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF'] 70446 18373 LYRLQFNEF True PC9_epitope_Rep6 1228.6240580544797 1228.62296993586 83.317 2 -0.14141639014056637 0.03360532116477822 0.9438714419765777 ['ENST00000404372.1_1_6:151256177-151256594:+|nuORF', 'ENSG00000122644|ENST00000651779|ARL4A'] 27922 11842 FQNESAAAL True PC9_epitope_Rep2 949.4505103666098 949.44940993586 50.879 2 -0.14145269797278082 0.03360532116477822 0.9438714419765777 ['ENSG00000198700|ENST00000361565|IPO9'] 14276 4306 DSYVGDEAQSK True PC9_epitope_Rep6 1197.51496109797 1197.5138699358602 23.602 2 -0.1415159088349606 0.03360532116477822 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 25229 9290 FEDAERPFP True NCI_RA007_Epitope_Rep2 1106.50327421546 1106.5021699358601 40.745 2 -0.14161915278176027 0.033619456366237484 0.9438714419765777 ['ENST00000369681.9_1_6:84569383-84569569:+|nuORF'] 94067 19244 RVTFLVVAI True PC9_epitope_Rep6 1016.6382515666398 1016.63714993586 86.672 2 -0.14163221858350822 0.033619456366237484 0.9438714419765777 ['nc|ENSG00000288611|P48145|NPBWR1'] 77499 11917 NYPSAFHSV True PC9_epitope_Rep5 1020.46649478392 1020.46538993586 50.836 2 -0.1416753077430125 0.033619456366237484 0.9438714419765777 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 52532 5203 KPPPPPPPP True PC9_epitope_Rep5 922.5276384884999 922.52654993586 25.03 2 -0.14170424429089357 0.033619456366237484 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 100987 8528 SLSVRTEFHPR True NCI_RA007_Epitope_Rep2 1327.69968260623 1327.69804490379 37.817 3 -0.14177181563312616 0.033619456366237484 0.9438714419765777 ['ENST00000424768.1_1_7:105926115-105926304:-|nuORF'] 116913 14956 TYPDVNNSI True PC9_epitope_Rep3 1021.4716397340101 1021.47054993586 62.66 2 -0.14178473621669033 0.033619456366237484 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 116731 10350 TYLDKIKKF True PC9_epitope_Rep6 1154.66994561774 1154.6683049037902 50.528 3 -0.14179215771317874 0.033619456366237484 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 139502 11819 YTIDTENSTV True PC9_epitope_Rep6 1141.51389846881 1141.51280993586 56.664 2 -0.14180412767382727 0.033619456366237484 0.9438714419765777 ['LSM14A-GPI|1|fusion', 'nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A', 'LSM14A-GPI|2|fusion'] 88194 19913 QYAPLLAVF True NCI_RA007_Epitope_Rep5 1020.5644179200399 1020.56332993586 83.509 2 -0.14182162422093447 0.0336368381372151 0.9438714419765777 ['ENSG00000136261|ENST00000258761|BZW2'] 62096 10313 LLNKSGPV True PC9_epitope_Rep1 826.4912529797799 826.49014993586 44.553 2 -0.14183985725281867 0.0336368381372151 0.9438714419765777 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF'] 61477 24187 LLFKTRKRRRK True PC9_epitope_Rep1 1500.9841181557597 1500.98302993586 97.85 2 -0.14188205636987014 0.0336368381372151 0.9438714419765777 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 77399 15861 NYLSTMKNF True PC9_epitope_Rep4 1116.52738078832 1116.5262899358602 68.941 2 -0.14192583958650432 0.03365226635739828 0.9438714419765777 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000523382.5_1_5:179225178-179228384:-|nuORF', 'ENST00000520822.5_1_5:179226870-179227569:-|nuORF'] 4175 13030 AIATELAQA True PC9_epitope_Rep4 886.4759968384598 886.47488993586 58.014 2 -0.14193453487385652 0.03365226635739828 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 140674 14916 YYPSTPGRYSI True PC9_epitope_Rep5 1302.6244519773 1302.6228149037902 62.379 3 -0.14193941092329077 0.03365226635739828 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 60886 8317 LKQYENLIL True NCI_RA007_Epitope_Rep3 1132.6492101731599 1132.64755490379 39.833 3 -0.14207724437624686 0.03365226635739828 0.9438714419765777 ['ENSG00000187823|ENST00000695839|RTL4'] 48890 4323 KETKLFTA True NCI_RA007_Epitope_Rep3 936.5280324113198 936.52692993586 23.745 2 -0.14211829348778038 0.03365226635739828 0.9438714419765777 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC', 'PTPRC|p.L654Wfs*16|1|0.17|ENSG00000081237|chr1:198731707-198731707|T/-|frameshift_variant', 'PTPRC|p.L652Ffs*18|1|0.26|ENSG00000081237|chr1:198731706-198731706|C/-|frameshift_variant', 'PTPRC|p.C311Lfs*5|1|0.18|ENSG00000081237|chr1:198708157-198708158|-/T|frameshift_variant'] 63689 5540 LPPVGNAK True NCI_RA007_Epitope_Rep3 794.46503823194 794.46394993586 28.789 2 -0.1421465029850979 0.03365226635739828 0.9438714419765777 ['RABEPK-PIK3R1|1|fusion', 'nc|ENSG00000136933|Q7Z6M1-2|RABEPK', 'ENSG00000136933|ENST00000373538|RABEPK'] 23959 6602 EYNTIKDKF True NCI_RA007_Epitope_Rep4 1156.5764391557198 1156.57480490379 32.021 3 -0.14218591250431706 0.033668341708542715 0.9438714419765777 ['nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 73830 13462 NHDVQVIL True PC9_epitope_Rep5 936.50288029264 936.50178993586 56.8 2 -0.14219680003377902 0.033668341708542715 0.9438714419765777 ['ENSG00000179151|ENST00000315127|EDC3'] 127301 22725 VQLQDYIQL True PC9_epitope_Rep1 1118.5971746003 1118.5960699358602 92.216 2 -0.14222316360883772 0.033668341708542715 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant'] 102227 9980 SPSRAQLPSL True NCI_RA007_Epitope_Rep4 1054.5771078620598 1054.5760099358602 45.231 2 -0.14223074666349278 0.033668341708542715 0.9438714419765777 ['ENST00000389851.8_2_4:1341218-1341545:+|nuORF'] 44548 13438 IPATPGIGA True PC9_epitope_Rep5 795.4490538146299 795.44850496793 56.706 1 -0.14224249791271576 0.033668341708542715 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 24649 5979 FASIHPAS True H1975_Epitope_Rep2 828.41300265908 828.41190993586 27.977 2 -0.14227004050487096 0.03368441395303894 0.9438714419765777 ['ENSG00000154845|ENST00000400556|PPP4R1', 'nc|ENSG00000154845|Q8TF05-2|PPP4R1', 'ENST00000582594.5_1_18:9547789-9550464:-|nuORF', 'ENST00000285124.12_1_18:9547789-9562973:-|nuORF'] 163 13641 AADPVSPLL True NCI_RA007_Epitope_Rep5 881.4858332461699 881.48472993586 59.153 2 -0.14233424019103597 0.03368441395303894 0.9438714419765777 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 85880 9614 QNIQKTLEV True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 44.606 2 -0.14234108298370224 0.03368441395303894 0.9438714419765777 ['PEX1|p.E638Q|1|0.12|ENSG00000127980|chr7:92504891-92504891|C/G|missense_variant'] 46883 16404 IVIDPKNPL True PC9_epitope_Rep1 1007.60153170475 1007.60042993586 67.922 2 -0.1423715795463394 0.03368441395303894 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 65104 8359 LSDPAAGAY True H1975_Epitope_Rep1 863.40249754503 863.40194496793 37.084 1 -0.14243645120101547 0.03368441395303894 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000557589.1_1_12:56815505-56817595:-|nuORF'] 39201 18481 HLGGLVIGI True PC9_epitope_Rep3 877.53853752537 877.53744993586 76.295 2 -0.1424659811177687 0.03370308816140378 0.9438714419765777 ['ENST00000370272.8_1_1:93826284-93826383:+|nuORF'] 124492 12846 VLFFQMFSP True NCI_RA007_Epitope_Rep1 1114.55213898418 1114.5510499358602 53.958 2 -0.1425642971511389 0.033739782411254325 0.9438714419765777 ['ENST00000539975.5_1_11:62621512-62622703:-|nuORF', 'ENST00000539921.5_1_11:62622368-62622703:-|nuORF', 'ENST00000538654.5_1_11:62622535-62622703:-|nuORF'] 109186 10566 TFRSSLFLW True NCI_RA007_Epitope_Rep4 1155.6076797143498 1155.60604490379 47.487 3 -0.14258144587919883 0.033739782411254325 0.9438714419765777 ['ENSG00000185245|ENST00000329125|GP1BA'] 7761 11597 ASVFGTMPLK True NCI_RA007_Epitope_Rep1 1049.5579526406098 1049.55684993586 49.08 2 -0.14260620200429805 0.033739782411254325 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2'] 126396 19083 VPLHSSCYLL True PC9_epitope_Rep2 1130.57941636118 1130.57830993586 78.767 2 -0.1426547986675981 0.0337764724068635 0.9438714419765777 ['chr3:153927317-153979854|138|13.17|0.05|7.92|-|0|TE_info:L1PB1,L1PB1_dup2586,L1,LINE,donor,+,153979854,153983404|LINC02006,None|24'] 84522 11795 QGVVTTLENV True PC9_epitope_Rep1 1058.56078909158 1058.5596899358602 50.239 2 -0.1426994621485612 0.0337764724068635 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'ENST00000492816.6_1_2:216226280-216244056:-|nuORF'] 51853 9375 KKLPPLPSL True NCI_RA007_Epitope_Rep4 991.64300259391 991.64190993586 42.916 2 -0.14270341057255045 0.0337764724068635 0.9438714419765777 ['ENST00000535872.1_1_11:71808870-71814295:-|nuORF', 'ENST00000539797.5_1_11:71808870-71811703:-|nuORF', 'ENSG00000149357|ENST00000278671|LAMTOR1'] 95346 19578 SAGPEGLLGV True PC9_epitope_Rep4 898.4759968384599 898.47544496793 83.43 1 -0.14276315302110193 0.03381250483035783 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11', 'nc|ENSG00000130935|Q9H8H0-2|NOL11'] 32116 8116 GEYKIMVA True NCI_RA007_Epitope_Rep3 909.4629896266099 909.46188993586 39.029 2 -0.1427859733219031 0.03381250483035783 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000595467.1_1_19:36037522-36037810:+|nuORF'] 115221 18389 TVCGYYTSV True PC9_epitope_Rep1 991.4320834211501 991.43098993586 75.524 2 -0.14279239718674366 0.03381250483035783 0.9438714419765777 ['ENSG00000244234|ENST00000463439|GMCL2'] 137575 15520 YLSPDLSKV True PC9_epitope_Rep5 1020.54916177872 1020.54806993586 64.707 2 -0.14290454633388716 0.03381250483035783 0.9438714419765777 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'ENST00000445336.2_1_X:74804463-74804925:+|nuORF', 'ENST00000479537.5_1_7:140434399-140447180:-|nuORF'] 140363 15487 YYEKLHTYF True PC9_epitope_Rep3 1262.5971746003 1262.59552490379 64.722 3 -0.14297739378571625 0.03382725112532117 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 99721 5640 SLGGEVTR True NCI_RA007_Epitope_Rep1 817.42938099921 817.42828993586 25.999 2 -0.1429871750575935 0.03382725112532117 0.9438714419765777 ['ENST00000375050.5_1_6:32157573-32157942:-|nuORF'] 34846 8884 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42883496793 39.525 1 -0.14302915773441136 0.03382725112532117 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 131763 16062 VYADQPHIF True PC9_epitope_Rep3 1088.52909504048 1088.5279899358602 66.933 2 -0.14313862407295921 0.03382725112532117 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 22777 6904 EVDEDFDSK True PC9_epitope_Rep1 1082.44039917538 1082.4393099358601 31.362 2 -0.14320717723728854 0.03382725112532117 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2'] 105776 13878 SVIEQGGIQTV True PC9_epitope_Rep6 1129.59790287629 1129.5968099358602 65.209 2 -0.14322313264796963 0.03382725112532117 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP', 'ENST00000566321.5_1_15:29046634-29050027:+|nuORF', 'ENST00000562423.5_1_15:29046609-29050027:+|nuORF'] 36811 21384 GVPQALFGV True PC9_epitope_Rep2 886.4912529797799 886.49014993586 87.725 2 -0.1432476695167351 0.03382725112532117 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 131989 10611 VYGKVDSF True PC9_epitope_Rep1 913.4545331178899 913.45342993586 45.707 2 -0.14332198984807595 0.033843300880853036 0.9438714419765777 ['ENSG00000152127|ENST00000281923|MGAT5'] 68171 10083 LTQAIPLHRL True H1975_Epitope_Rep3 1160.70297708152 1160.7018899358602 43.823 2 -0.14334835665645657 0.033843300880853036 0.9438714419765777 ['ENSG00000204347|ENST00000375366|BTBD17'] 2359 16686 AEQFAVGEI True PC9_epitope_Rep3 962.4709114580198 962.46980993586 69.318 2 -0.14342456921405564 0.033843300880853036 0.9438714419765777 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF', 'ENSG00000100749|ENST00000216639|VRK1'] 132202 7863 VYKDHQTITI True PC9_epitope_Rep2 1216.6451874218799 1216.6440899358602 35.613 2 -0.14344257788510956 0.033843300880853036 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 116729 10828 TYLDKIKKF True PC9_epitope_Rep4 1154.66994561774 1154.6683049037902 49.411 3 -0.14344822318693679 0.033843300880853036 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 57161 13184 LEERSVLFAVA True H1975_Epitope_Rep2 1232.6764875501601 1232.67538993586 55.837 2 -0.1435995745907245 0.03387997141256688 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000487875.5_1_15:91491769-91496943:+|nuORF'] 77615 14587 NYVEKGFQI True PC9_epitope_Rep4 1096.5553097883198 1096.5542099358602 64.034 2 -0.14362074394879318 0.03387997141256688 0.9438714419765777 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6', 'TANK-SLC38A6|2|fusion', 'ENSG00000139974|ENST00000267488|SLC38A6', 'ENST00000527591.5_1_14:61453838-61514994:+|nuORF'] 135449 16614 YEALGEII True NCI_RA007_Epitope_Rep5 906.4698488288599 906.46874993586 70.669 2 -0.1436447358890033 0.03387997141256688 0.9438714419765777 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF', 'ENST00000504768.2_1_5:93246475-93410459:-|nuORF', 'nc|ENSG00000113391|Q8WUF8-4|ARB2A', 'nc|ENSG00000113391|Q8WUF8-3|ARB2A', 'ENSG00000113391|ENST00000395965|FAM172A'] 106450 18530 SVVDGTPLV True PC9_epitope_Rep2 885.48074786573 885.4801949679301 76.625 1 -0.14369957518077706 0.03389863246542533 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 23674 23880 EYGSIIAFF True PC9_epitope_Rep1 1045.51204799401 1045.5114749679299 96.656 1 -0.14374287914083195 0.033913362560111245 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 126165 18901 VPFPTPLEA True PC9_epitope_Rep6 969.5171333744498 969.51602993586 85.349 2 -0.14374994736547553 0.033913362560111245 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 13194 14405 DLTDYLMK True NCI_RA007_Epitope_Rep1 997.47903361357 997.47792993586 60.074 2 -0.14375165166459264 0.033913362560111245 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 47619 19950 IYPDSFTVL True PC9_epitope_Rep6 1053.53826274185 1053.5371699358602 89.397 2 -0.1437735217592516 0.033913362560111245 0.9438714419765777 ['RWDD1-FAM26D|1|fusion', 'ENSG00000111832|ENST00000466444|RWDD1'] 38566 14504 HHFEWIQKL True PC9_epitope_Rep6 1236.64037682496 1236.63874490379 67.672 3 -0.14378080172799898 0.033913362560111245 0.9438714419765777 ['nc|ENSG00000007038|Q9Y6M0-3|PRSS21', 'nc|ENSG00000007038|Q9Y6M0-2|PRSS21', 'ENSG00000007038|ENST00000005995|PRSS21'] 84001 2694 QEMQEVQSSR True PC9_epitope_Rep3 1220.5455500336 1220.54444993586 14.824 2 -0.14378738032481048 0.033913362560111245 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 46564 5971 ITRENLEA True H1975_Epitope_Rep2 944.4927095317598 944.49160993586 27.946 2 -0.14387334504678512 0.033913362560111245 0.9438714419765777 ['ENSG00000125901|ENST00000380325|MRPS26'] 1839 11547 AEIEDPPIP True NCI_RA007_Epitope_Rep3 979.4862271689899 979.48512993586 52.551 2 -0.14400231129027927 0.03396933297284771 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 23853 18581 EYLTKWPKF True PC9_epitope_Rep5 1210.6386454894598 1210.63699490379 76.496 3 -0.144012563666534 0.03396933297284771 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT'] 123488 14628 VIGPPVVL True H1975_Epitope_Rep1 792.5109257952 792.51037496793 61.476 1 -0.14403389549460155 0.03396933297284771 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 47207 21531 IYAPPLPSL True PC9_epitope_Rep2 969.55351888317 969.55242993586 88.286 2 -0.14405265377276505 0.03398601938747924 0.9438714419765777 ['ENSG00000121057|ENST00000337714|AKAP1'] 81393 21127 PPVGGFSF True PC9_epitope_Rep4 806.39628996578 806.39574496793 89.428 1 -0.1441008543016947 0.03398601938747924 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 38495 4348 HHDDPEVL True PC9_epitope_Rep2 960.4301092752 960.42900993586 22.073 2 -0.14416889506365613 0.03398601938747924 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 58541 4006 LFDENDRRYQK True NCI_RA007_Epitope_Rep2 1482.7215402496201 1482.7198949037902 20.22 3 -0.14419701615458158 0.03398601938747924 0.9438714419765777 ['ENST00000558316.5_2_14:103800804-103802377:+|nuORF'] 140293 13943 YYDKHFTEF True PC9_epitope_Rep3 1248.54513902744 1248.5440499358601 58.708 2 -0.1442531627361323 0.03402135506169025 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 114258 17490 TSAESFVNV True PC9_epitope_Rep1 952.45017601344 952.44906993586 72.069 2 -0.14426853560647804 0.03402135506169025 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 137503 19097 YLPPGFLSA True PC9_epitope_Rep6 963.50656869075 963.50546993586 86.105 2 -0.1443227141125701 0.03402135506169025 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 69292 10429 LVPGHLDQV True PC9_epitope_Rep6 976.53418042092 976.53308993586 50.869 2 -0.14432727025004494 0.03402135506169025 0.9438714419765777 ['KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant'] 30021 16727 FYHKYFNYL True PC9_epitope_Rep4 1293.61824439805 1293.6166049037902 72.308 3 -0.144332875188989 0.03402135506169025 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 34268 19171 GPLGALPVE True PC9_epitope_Rep2 851.47526856247 851.47472496793 79.114 1 -0.14441356313656284 0.03405931417979611 0.9438714419765777 ['ENST00000397261.7_1_3:9848473-9848707:+|nuORF'] 83064 19580 PYLFPVAA True PC9_epitope_Rep6 876.4745402864799 876.47344993586 87.979 2 -0.14445621929345256 0.034077964203656864 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 29383 8024 FVEQHTPQL True NCI_RA007_Epitope_Rep4 1097.5505587610498 1097.54946993586 37.631 2 -0.14446844721590363 0.03409529693412619 0.9438714419765777 ['ENSG00000168878|ENST00000519937|SFTPB'] 137902 5997 YPNSGSVSA True PC9_epitope_Rep6 880.39266113732 880.39156993586 31.388 2 -0.14452177969093272 0.03409529693412619 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 72710 16326 MYPYIFHVL True NCI_RA007_Epitope_Rep3 1181.59433814933 1181.59324993586 71.92 2 -0.14452561844634434 0.03409529693412619 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'ENST00000475933.1_1_9:96291769-96293007:+|nuORF'] 61587 19641 LLGPRLVLA True PC9_epitope_Rep1 950.6276868829399 950.62713496793 80.375 1 -0.14464678135315195 0.03411328622726746 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 85684 16708 QLREAFEQL True PC9_epitope_Rep3 1132.5876725457597 1132.58656993586 69.401 2 -0.14466253557894151 0.03411328622726746 0.9438714419765777 ['nc|ENSG00000122952|O95229-2|ZWINT', 'ENSG00000122952|ENST00000373944|ZWINT'] 38113 6928 HEPEPHIL True PC9_epitope_Rep4 970.4872302285 970.48612993586 33.877 2 -0.14470453960653507 0.03412929753103102 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 695 17006 AAVEWFDGK True PC9_epitope_Rep6 1021.4868958753298 1021.48578993586 77.965 2 -0.14470617900410934 0.03412929753103102 0.9438714419765777 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF', 'ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 6448 7250 APSPATAAATA True PC9_epitope_Rep5 927.4661604307499 927.46506993586 32.85 2 -0.14471576459283275 0.03412929753103102 0.9438714419765777 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 55905 23227 LDGLYLLTL True PC9_epitope_Rep5 1019.5902983147099 1019.58920993586 94.326 2 -0.144728419632178 0.03412929753103102 0.9438714419765777 ['ENST00000590435.5_1_17:74559537-74560081:+|nuORF'] 71993 18851 MQDEPRYMML True PC9_epitope_Rep5 1312.5614004218799 1312.56030993586 77.527 2 -0.14473378658763497 0.03412929753103102 0.9438714419765777 ['ENSG00000103319|ENST00000263026|EEF2K'] 6646 8918 AQAAALYKV True PC9_epitope_Rep4 933.5283667644899 933.52726993586 41.844 2 -0.14477403079711684 0.03414728308078371 0.9438714419765777 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'ENST00000483659.5_1_2:85622736-85628768:-|nuORF'] 71950 17143 MPTLPPPSV True PC9_epitope_Rep6 937.49428975489 937.49318993586 78.526 2 -0.1447827060516899 0.03414728308078371 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 9540 12293 AYAGSGNVL True PC9_epitope_Rep3 850.41848196234 850.41793496793 52.311 1 -0.1447964576142083 0.0341639483487425 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 54271 6159 KYPNVFKKI True NCI_RA007_Epitope_Rep3 1135.67536535135 1135.67371490379 31.227 3 -0.14479891750040536 0.0341639483487425 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 1322 6469 AEEAARLSVAA True H1975_Epitope_Rep3 1086.56693710118 1086.5658499358601 29.855 2 -0.14480081986786306 0.0341639483487425 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 80655 17767 PLPPPLPPP True PC9_epitope_Rep4 923.54803957991 923.54694993586 76.367 2 -0.14487422258044408 0.0341639483487425 0.9438714419765777 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 19004 14493 ELGFHEGDVI True PC9_epitope_Rep4 1114.5294889632999 1114.52838993586 63.658 2 -0.14493535297575388 0.03418259023354565 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 36670 13459 GVLSDLTK True H1975_Epitope_Rep1 831.47018318203 831.46908993586 56.886 2 -0.1450434770762385 0.03420123139873772 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 782 4173 AAYNRYFRK True NCI_RA007_Epitope_Rep5 1187.6199757335496 1187.6183249037902 22.574 3 -0.14508431641865493 0.03421987184436038 0.9438714419765777 ['ENSG00000111341|ENST00000539261|MGP', 'nc|ENSG00000111341|P08493-2|MGP'] 6430 8605 APSGNYVAC True PC9_epitope_Rep4 880.3749028981999 880.37380993586 40.58 2 -0.14518866475778325 0.03425252310839235 0.9438714419765777 ['ENSG00000114450|ENST00000232564|GNB4'] 82503 9600 PVESDVEAP True H1975_Epitope_Rep2 941.4341915961298 941.43308993586 41.902 2 -0.14521657631356744 0.03425252310839235 0.9438714419765777 ['ENSG00000168143|ENST00000306858|FAM83B', 'FAM83B|p.M1000Ifs*12|1|0.2|ENSG00000168143|chr6:54941969-54941970|-/T|frameshift_variant', 'FAM83B|p.K141Rfs*2|1|0.3|ENSG00000168143|chr6:54870665-54870665|G/-|frameshift_variant'] 71357 7951 MHYNRKIIL True PC9_epitope_Rep4 1186.6644833978198 1186.66282490379 38.026 3 -0.14522222952266844 0.03425252310839235 0.9438714419765777 ['ENST00000557431.5_1_14:78177213-78182211:+|nuORF'] 56172 9794 LDNQIKKDLA True H1975_Epitope_Rep3 1156.64518742188 1156.6440899358602 42.696 2 -0.14522536916050832 0.03425252310839235 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 110279 19605 TIGIVDNEL True PC9_epitope_Rep3 972.51277627 972.51166993586 80.648 2 -0.1452284222727645 0.03425252310839235 0.9438714419765777 ['ENSG00000145723|ENST00000399004|GIN1'] 70310 19215 LYPFQIHSI True PC9_epitope_Rep4 1116.59678067748 1116.59568993586 82.011 2 -0.1452436290892816 0.03425252310839235 0.9438714419765777 ['BMP2K-CDS1|1|fusion', 'ENSG00000163624|ENST00000295887|CDS1'] 24232 15787 EYVSQHLVF True PC9_epitope_Rep6 1120.5553097883198 1120.5542099358602 72.975 2 -0.1452763772008003 0.03425252310839235 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 124761 13297 VLKLLSEDP True PC9_epitope_Rep1 1012.580461907 1012.57936993586 56.011 2 -0.14528434372335586 0.03425252310839235 0.9438714419765777 ['ENSG00000178814|ENST00000618853|OPLAH'] 111249 13842 TLGPRFLL True H1975_Epitope_Rep2 915.55418758951 915.55308993586 58.39 2 -0.14536390197678414 0.03425252310839235 0.9438714419765777 ['ENST00000502001.2_1_5:8457745-8460055:+|nuORF'] 123174 11218 VHGPPVQL True PC9_epitope_Rep5 845.47593726881 845.47484993586 48.139 2 -0.14541675742016041 0.03427049765548116 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 66976 18611 LTAAATLSV True PC9_epitope_Rep6 845.48583324617 845.48472993586 84.23 2 -0.1454542161682949 0.03427049765548116 0.9438714419765777 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 89076 4092 REERPPTLSA True H1975_Epitope_Rep3 1154.6043852390599 1154.6027249037902 20.866 3 -0.14549348956056715 0.034289132448286505 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 85580 22288 QLLNWVYLSL True PC9_epitope_Rep2 1247.69140933831 1247.6903099358601 91.209 2 -0.14551648772764758 0.034307104542121714 0.9438714419765777 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 112784 7916 TPLHVTSPSSA True PC9_epitope_Rep5 1095.55603806431 1095.5549499358601 35.389 2 -0.14552712999133094 0.034307104542121714 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 86608 17896 QRDMYRILL True PC9_epitope_Rep5 1206.65431263694 1206.65266490379 73.855 3 -0.14556035970069842 0.034322426300354994 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant', 'nc|ENSG00000047410|P12270-2|TPR'] 74336 22741 NIPPYFVAL True PC9_epitope_Rep1 1032.56441792004 1032.56387496793 92.278 1 -0.14556581899585214 0.034322426300354994 0.9438714419765777 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 89526 4333 RERLEQQVP True NCI_RA007_Epitope_Rep3 1153.62036965637 1153.61872490379 23.793 3 -0.1455667265534912 0.034322426300354994 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 101891 14003 SPLHLAVEA True PC9_epitope_Rep5 935.5076313199099 935.50652993586 58.882 2 -0.14559047051452323 0.034322426300354994 0.9438714419765777 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 22048 6812 ESRKDMVV True PC9_epitope_Rep4 962.4855159763399 962.48440993586 33.417 2 -0.1456363866093406 0.034322426300354994 0.9438714419765777 ['ENSG00000106038|ENST00000496902|EVX1'] 93421 9849 RRYLRRLLLL True NCI_RA007_Epitope_Rep4 1370.8986571962998 1370.89702490379 44.73 3 -0.14563802349653943 0.034322426300354994 0.9438714419765777 ['ENSG00000141096|ENST00000268793|DPEP3'] 33465 19724 GLGPLQLAV True PC9_epitope_Rep5 866.5225531080599 866.52144993586 80.915 2 -0.14571362960723522 0.034359686692132574 0.9438714419765777 ['ENST00000585457.5_1_17:42253853-42254417:-|nuORF'] 85922 16172 QNSMATVEL True PC9_epitope_Rep5 991.4644461785899 991.46334993586 67.195 2 -0.14578199773224035 0.034359686692132574 0.9438714419765777 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'nc|ENSG00000144406|Q8N2C7-3|UNC80', 'ENST00000478701.1_1_2:210636760-210659540:+|nuORF'] 103323 16214 SQVDRLVAL True PC9_epitope_Rep5 999.5712942056298 999.5707749679301 67.359 1 -0.1457907721596679 0.034376989409109326 0.9438714419765777 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 121189 16794 VGGLGVAVV True PC9_epitope_Rep3 769.46978925921 769.4692449679301 69.746 1 -0.14580396194655607 0.034376989409109326 0.9438714419765777 ['nc|ENSG00000157593|Q8TB61-5|SLC35B2', 'nc|ENSG00000157593|Q8TB61-4|SLC35B2', 'nc|ENSG00000157593|Q8TB61-3|SLC35B2', 'nc|ENSG00000157593|Q8TB61-2|SLC35B2', 'ENSG00000157593|ENST00000393812|SLC35B2'] 45688 21101 ISLEKLFVT True PC9_epitope_Rep3 1048.6168474157198 1048.61574993586 86.446 2 -0.1458065868104711 0.034376989409109326 0.9438714419765777 ['ENSG00000172901|ENST00000357872|LVRN', 'ENST00000504467.5_1_5:115348136-115357442:+|nuORF'] 87877 14185 QVLKDLVKV True PC9_epitope_Rep5 1040.6593809340397 1040.65828993586 59.571 2 -0.145842186906862 0.03439561711485783 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E'] 49053 22054 KFLLRLCVDA True PC9_epitope_Rep3 1176.66890007192 1176.66780993586 90.127 2 -0.14596284024232234 0.03443287037037037 0.9438714419765777 ['ENST00000405995.5_1_9:134375044-134375179:+|nuORF'] 71820 17997 MPAGSFITA True PC9_epitope_Rep2 893.43168949833 893.43058993586 74.529 2 -0.145983542988942 0.03443287037037037 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 121260 16114 VGGVALSLS True PC9_epitope_Rep6 801.4596184983301 801.4590749679301 74.321 1 -0.14604468066397877 0.03447078567157269 0.9438714419765777 ['PEX12|p.I341Sfs*11|1|0.21|ENSG00000108733|chr17:35575842-35575842|G/-|frameshift_variant', 'ENSG00000108733|ENST00000225873|PEX12'] 105945 22121 SVLETSPDILL True PC9_epitope_Rep5 1185.64926974281 1185.64816993586 90.124 2 -0.14607410422800093 0.034489410130781994 0.9438714419765777 ['ENSG00000119514|ENST00000375011|GALNT12'] 98658 9013 SIPSTTSAP True PC9_epitope_Rep2 859.42871229287 859.42760993586 40.02 2 -0.14617516897413235 0.03450803387149663 0.9438714419765777 ['ENSG00000215182|ENST00000621226|MUC5AC'] 57168 7392 LEERTPPVP True H1975_Epitope_Rep2 1036.5553097883198 1036.5542099358602 33.376 2 -0.14620753805331996 0.034525990934516346 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 1661 10472 AEGFGSPPSP True H1975_Epitope_Rep2 944.4239612655999 944.42286993586 45.298 2 -0.146219680339178 0.034525990934516346 0.9438714419765777 ['ENST00000308234.11_1_5:98105044-98106367:+|nuORF'] 41928 5348 IEANFSRRVLP True H1975_Epitope_Rep3 1300.72516907808 1300.7235149037901 25.641 3 -0.14631803085409115 0.034544612892026386 0.9438714419765777 ['FAF2|p.P408S|1|0.36|ENSG00000113194|chr5:176506834-176506834|C/T|missense_variant'] 130357 20521 VTVDNLGILYI True H1975_Epitope_Rep1 1218.6859896047 1218.6854749679298 85.345 1 -0.14634150355623035 0.03456323413119371 0.9438714419765777 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 169 4903 AAEAAAEAAAT True H1975_Epitope_Rep1 945.4403396057298 945.43924993586 23.936 2 -0.1463462487569043 0.034577186385112334 0.9438714419765777 ['ENST00000242719.3_1_1:51701983-51702103:+|nuORF'] 111515 16177 TLLQNGASI True PC9_epitope_Rep2 915.5025459394699 915.50144993586 67.477 2 -0.14635591005465834 0.034577186385112334 0.9438714419765777 ['ANKRD27|p.T591I|1|0.25|ENSG00000105186|chr19:32622477-32622477|G/A|missense_variant'] 26803 15148 FLEACPKVESF True PC9_epitope_Rep2 1268.61111041228 1268.6094749037902 63.525 3 -0.14635794715621886 0.034577186385112334 0.9438714419765777 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.F1306Ifs*2|1|0.33|ENSG00000188906|chr12:40305920-40305932|AACTTTGATTTTA/-|frameshift_variant', 'ENST00000479187.5_1_12:40692272-40758932:+|nuORF'] 90666 15083 RKLFFRRCLSL True PC9_epitope_Rep5 1437.83909371485 1437.83743490379 63.024 3 -0.1463580073376709 0.034577186385112334 0.9438714419765777 ['ENST00000414441.5_1_7:100031292-100031550:+|nuORF'] 134926 6995 YAEFQYRRRHR True NCI_RA007_Epitope_Rep1 1580.8072759926 1580.80564490379 31.207 3 -0.14637953321987263 0.034577186385112334 0.9438714419765777 ['ENSG00000001629|ENST00000265742|ANKIB1'] 14894 15494 DYKESFNTI True PC9_epitope_Rep1 1115.5135045459901 1115.51297496793 64.42 1 -0.14638215811200664 0.034577186385112334 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'nc|ENSG00000134317|Q9NZI5-2|GRHL1', 'ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1'] 110205 16249 TIDVAAVTAV True PC9_epitope_Rep1 958.53351171458 958.53240993586 67.32 2 -0.14638733365234544 0.034577186385112334 0.9438714419765777 ['SDK1|p.P1422Lfs*13|1|0.1|ENSG00000146555|chr7:4145758-4145759|CC/T|frameshift_variant', 'nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 126915 10157 VPVDTGVAA True PC9_epitope_Rep3 827.4388830537498 827.43778993586 44.022 2 -0.14638936174170944 0.034577186385112334 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 91518 5542 RPAAGFVA True PC9_epitope_Rep6 787.4340724568299 787.43296993586 29.335 2 -0.1464435239766348 0.03459513662572073 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 19880 22868 ELVTLLLSI True PC9_epitope_Rep2 999.6215984429899 999.62050993586 93.451 2 -0.1464717369707995 0.03459513662572073 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 62069 19864 LLMTSLTES True PC9_epitope_Rep1 993.50524836141 993.50414993586 81.224 2 -0.14649913802256936 0.03461108325941923 0.9438714419765777 ['ENSG00000175928|ENST00000319331|LRRN1'] 96058 2772 SEAPPTNQATA True H1975_Epitope_Rep3 1085.49891711101 1085.4978299358602 14.748 2 -0.1465565760685683 0.03461108325941923 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 140831 12954 YYTDIMHTL True NCI_RA007_Epitope_Rep3 1155.5270464351497 1155.5259499358601 58.228 2 -0.14657903395448288 0.03461108325941923 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 30641 13492 GALEPHINAQI True PC9_epitope_Rep4 1161.61422164677 1161.6131299358601 59.794 2 -0.14659945171226832 0.03461108325941923 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 15995 10444 EDYSPESSWEP True H1975_Epitope_Rep2 1324.5095413643598 1324.5084499358602 45.189 2 -0.14660386970979733 0.03461108325941923 0.9438714419765777 ['ENSG00000187068|ENST00000335012|C3orf70'] 67488 4027 LTEKANHYY True H1975_Epitope_Rep2 1137.54547338061 1137.54382490379 20.565 3 -0.14664168293075042 0.03462969747218634 0.9438714419765777 ['nc|ENSG00000127054|Q5TA45-2|INTS11', 'nc|ENSG00000127054|Q5TA45-4|INTS11', 'nc|ENSG00000127054|Q5TA45-3|INTS11', 'ENSG00000127054|ENST00000435064|INTS11', 'nc|ENSG00000127054|Q5TA45-5|INTS11', 'ENST00000478641.5_1_1:1248876-1249468:-|nuORF', 'ENST00000470030.6_1_1:1248876-1250311:-|nuORF', 'INTS11|p.T269M|1|0.05|ENSG00000127054|chr1:1313883-1313883|G/A|missense_variant'] 2842 7828 AEVRVIAPP True H1975_Epitope_Rep2 950.5549158654998 950.55380993586 35.059 2 -0.1466991241219015 0.03464764291911694 0.9438714419765777 ['nc|ENSG00000172731|Q8TCA0-3|LRRC20', 'nc|ENSG00000172731|Q8TCA0-2|LRRC20', 'ENSG00000172731|ENST00000446961|LRRC20'] 55455 10333 LATVTVRP True PC9_epitope_Rep3 855.5178020807899 855.51670993586 44.69 2 -0.14672658848350353 0.03464764291911694 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 135640 6329 YEESQSRLN True H1975_Epitope_Rep2 1124.5098161478797 1124.50870993586 29.277 2 -0.14675225127359875 0.034661577313824146 0.9438714419765777 ['nc|ENSG00000002079|Q9H6N6|MYH16'] 62333 13009 LLRGPAIL True H1975_Epitope_Rep2 851.5592729699499 851.55816993586 55.156 2 -0.14675390476325376 0.034661577313824146 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF'] 65922 19285 LSLIKDLGL True PC9_epitope_Rep6 970.60628273202 970.60518993586 86.826 2 -0.14679751943227234 0.034661577313824146 0.9438714419765777 ['ENSG00000104324|ENST00000220763|CPQ'] 10008 15571 AYTLLLHTW True NCI_RA007_Epitope_Rep2 1116.59678067748 1116.59568993586 65.277 2 -0.14681575899631352 0.034661577313824146 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000523351.5_1_5:169188379-169509859:+|nuORF', 'DOCK2|p.A1240D|1|0.25|ENSG00000134516|chr5:170041108-170041108|C/A|missense_variant'] 52395 9645 KPGKPRKRKKR True NCI_RA007_Epitope_Rep5 1377.9157042427698 1377.91405490379 43.737 3 -0.14685674127113915 0.034661577313824146 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 9351 21096 AVTGILVQL True PC9_epitope_Rep6 912.5644179200399 912.56332993586 93.974 2 -0.1468593175535098 0.034661577313824146 0.9438714419765777 ['ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000487805.6_1_3:49750857-49758735:+|nuORF'] 138168 8311 YQNQEIHNL True PC9_epitope_Rep2 1157.5465360097699 1157.54542993586 37.333 2 -0.14687267633614012 0.034661577313824146 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000456732.2_10:48190054-48195746:+|nuORF'] 101678 17876 SPFTVGVAA True PC9_epitope_Rep3 847.4439684341899 847.44341496793 73.956 1 -0.14696292738465075 0.034661577313824146 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 1368 4907 AEEEGVPRP True H1975_Epitope_Rep2 982.4719740871798 982.47086993586 23.958 2 -0.14698117803169233 0.034672834152452536 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3'] 65862 10859 LSKTSVVDL True PC9_epitope_Rep1 960.54916177872 960.54806993586 46.656 2 -0.14702456771482592 0.034672834152452536 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4'] 137506 11005 YLPSQVSRV True PC9_epitope_Rep5 1047.57129420563 1047.57018993586 47.319 2 -0.14704187989966264 0.034672834152452536 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2'] 100542 15735 SLPTAPLAP True PC9_epitope_Rep6 865.49091862661 865.48982993586 72.75 2 -0.14708120873843802 0.034672834152452536 0.9438714419765777 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 103135 7491 SQMEQFPVK True NCI_RA007_Epitope_Rep4 1092.5273807883198 1092.5262899358602 35.46 2 -0.14711531545285156 0.034672834152452536 0.9438714419765777 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'nc|ENSG00000153827|Q14669-4|TRIP12', 'ENST00000461189.1_1_2:230659893-230661399:-|nuORF'] 114426 10326 TSDVGGYYY True H1975_Epitope_Rep1 1023.4185415319901 1023.41744993586 44.667 2 -0.14712081833483182 0.034672834152452536 0.9438714419765777 ['ENSG00000131711|ENST00000296755|MAP1B'] 57908 6418 LEQKVELAQ True H1975_Epitope_Rep2 1056.5815245361598 1056.5804299358601 29.609 2 -0.14712466522543305 0.034672834152452536 0.9438714419765777 ['ENSG00000100941|ENST00000216832|PNN', 'ENST00000557680.1_1_14:39648378-39651535:+|nuORF'] 32545 6769 GGTEPVVE True NCI_RA007_Epitope_Rep5 786.37594844402 786.3753949679301 32.715 1 -0.1471588139345067 0.034672834152452536 0.9438714419765777 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 939 4542 ADTQTYQPYNK True H1975_Epitope_Rep3 1327.6044448087098 1327.60334993586 22.591 2 -0.14717748381098533 0.034672834152452536 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'DCAF5-ERH|1|fusion'] 861 8763 ADIRGFVA True NCI_RA007_Epitope_Rep3 847.4552018242299 847.45410993586 41.558 2 -0.14720287597473397 0.034672834152452536 0.9438714419765777 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 113300 13850 TQIDHYVGI True PC9_epitope_Rep4 1044.52400966004 1044.52347496793 61.175 1 -0.14722764087564275 0.034672834152452536 0.9438714419765777 ['nc|ENSG00000133318|O95197-3|RTN3', 'nc|ENSG00000133318|O95197-4|RTN3', 'nc|ENSG00000133318|O95197-7|RTN3', 'nc|ENSG00000133318|O95197-2|RTN3', 'ENSG00000133318|ENST00000377819|RTN3'] 58255 6525 LETAEEVK True NCI_RA007_Epitope_Rep1 917.4705771048499 917.46948993586 29.396 2 -0.1472405214614142 0.034672834152452536 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 109954 14416 THSGYFSSL True PC9_epitope_Rep5 997.45051036661 997.44940993586 60.45 2 -0.14725557458423794 0.03469077032782778 0.9438714419765777 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2'] 71144 9870 MEVDTTPTV True H1975_Epitope_Rep3 991.45321278855 991.45210993586 42.993 2 -0.14728014661278072 0.03469077032782778 0.9438714419765777 ['ENSG00000074201|ENST00000525428|CLNS1A', 'ENST00000503181.1_1_4:170754403-170754511:+|nuORF'] 55284 16347 LARDSLAL True PC9_epitope_Rep1 857.4970666362099 857.49596993586 67.699 2 -0.14738628183182165 0.03470937403638606 0.9438714419765777 ['SORL1|p.M2063Vfs*2|1|0.15|ENSG00000137642|chr11:121625100-121625101|AT/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF', 'SORL1|p.G687Vfs*4|1|0.3|ENSG00000137642|chr11:121549967-121549967|G/-|frameshift_variant'] 44908 11364 IQDNKFIEA True PC9_epitope_Rep3 1076.55022440788 1076.54912993586 48.716 2 -0.14741300435531454 0.03472596932089725 0.9438714419765777 ['nc|ENSG00000082458|Q92796-3|DLG3', 'nc|ENSG00000082458|Q92796-2|DLG3', 'ENSG00000082458|ENST00000374360|DLG3'] 128301 13277 VSAYGPGLVY True H1975_Epitope_Rep2 1024.5229470308798 1024.5223749679299 56.199 1 -0.14742015325416946 0.03472596932089725 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'FLNB|p.S1823C|1|0.55|ENSG00000136068|chr3:58145962-58145962|A/T|missense_variant', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 60023 13035 LHRKVEII True PC9_epitope_Rep4 1006.6287495120998 1006.62764993586 58.032 2 -0.14742774803023612 0.03472596932089725 0.9438714419765777 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1'] 22494 13854 ETIPCTRE True PC9_epitope_Rep1 947.43823143075 947.43712993586 58.131 2 -0.14744763942323658 0.03472596932089725 0.9438714419765777 ['nc|ENSG00000138347|Q86TC9-2|MYPN', 'ENSG00000138347|ENST00000358913|MYPN'] 113170 17332 TQDGNIYQL True PC9_epitope_Rep3 1050.4981888350198 1050.49767496793 71.842 1 -0.14749367370139835 0.034741892594947685 0.9438714419765777 ['nc|ENSG00000175575|Q9BRP4-2|PAAF1', 'ENSG00000175575|ENST00000310571|PAAF1', 'nc|ENSG00000175575|Q9BRP4-3|PAAF1', 'RELT-PAAF1|1|fusion'] 95188 7958 SAAHAIVSV True PC9_epitope_Rep2 853.46576650793 853.46466993586 35.974 2 -0.14751049850314765 0.034741892594947685 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF', 'nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'ENST00000482876.5_1_2:70442329-70444102:-|nuORF'] 117422 5266 VADPETRTV True PC9_epitope_Rep1 986.50327421546 986.50216993586 25.101 2 -0.14752227371972074 0.034741892594947685 0.9438714419765777 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000595792.1_1_19:50369586-50370764:-|nuORF', 'ENST00000594661.5_1_19:50367579-50369988:-|nuORF'] 54287 11445 KYPNVFKKI True PC9_epitope_Rep5 1135.67536535135 1135.67371490379 49.021 3 -0.14755204644301412 0.034741892594947685 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 27231 8791 FLVGTLTYR True H1975_Epitope_Rep1 1068.59678067748 1068.59568993586 38.744 2 -0.14756015576268658 0.034741892594947685 0.9438714419765777 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 31696 10072 GEIGLGTPP True NCI_RA007_Epitope_Rep3 839.43888305375 839.43833496793 46.711 1 -0.14757789748333386 0.034778420038535644 0.9438714419765777 ['ENSG00000131400|ENST00000253719|NAPSA'] 42834 17979 IFLHTLNNI True PC9_epitope_Rep2 1083.60767971435 1083.60658993586 74.46 2 -0.14760351561383336 0.034778420038535644 0.9438714419765777 ['ENSG00000122140|ENST00000241600|MRPS2'] 129504 6693 VTFEERDKCP True H1975_Epitope_Rep3 1222.5652228490198 1222.5635849037901 30.699 3 -0.14763075267253248 0.034778420038535644 0.9438714419765777 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 20139 16797 ENLRTGLEL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 69.434 2 -0.14770494993588099 0.03479165462636537 0.9438714419765777 ['ENSG00000140795|ENST00000394809|MYLK3', 'ENST00000564731.5_1_16:46761123-46772038:-|nuORF'] 110032 9312 THVGPTPAI True PC9_epitope_Rep1 891.48141657207 891.48030993586 40.675 2 -0.1477266385246287 0.03479165462636537 0.9438714419765777 ['ENSG00000157259|ENST00000287957|GATAD1'] 128708 14788 VSPASFENV True PC9_epitope_Rep6 948.45526139388 948.45416993586 68.848 2 -0.14774149125169325 0.03479165462636537 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 30040 18403 FYISPVNKL True PC9_epitope_Rep1 1079.60153170475 1079.6004299358601 75.576 2 -0.1477720067216024 0.03479165462636537 0.9438714419765777 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 82035 6452 PSTSVPAP True H1975_Epitope_Rep3 754.3861192049 754.3855749679301 29.791 1 -0.14783730174423895 0.03479165462636537 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2'] 82832 6807 PVSSTYSQL True PC9_epitope_Rep2 980.4814761417201 980.48036993586 31.59 2 -0.14784113645481023 0.03479165462636537 0.9438714419765777 ['ENSG00000161682|ENST00000293443|FAM171A2'] 101285 12635 SLWTSLSL True H1975_Epitope_Rep1 905.48583324617 905.48472993586 53.653 2 -0.1478551677869084 0.03479165462636537 0.9438714419765777 ['nc|ENSG00000014919|Q7KZN9-2|COX15', 'ENSG00000014919|ENST00000016171|COX15'] 106279 9110 SVQRSFTQV True PC9_epitope_Rep1 1050.54580773378 1050.54470993586 39.893 2 -0.14788413444415072 0.03479165462636537 0.9438714419765777 ['ENSG00000198911|ENST00000361204|SREBF2', 'nc|ENSG00000198911|Q12772-2|SREBF2'] 59209 13329 LGGALSWE True H1975_Epitope_Rep1 831.41266830591 831.41211496793 56.375 1 -0.14789788511480415 0.03479165462636537 0.9438714419765777 ['ENST00000371717.7_1_9:139317959-139318130:+|nuORF'] 75227 4931 NPKDNNQFASA True PC9_epitope_Rep1 1204.54726428576 1204.54616993586 23.83 2 -0.14801890725973038 0.03480890738172292 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 102234 20032 SPSTFALSF True PC9_epitope_Rep5 955.4650978015899 955.46400993586 82.105 2 -0.14802285645713797 0.03480890738172292 0.9438714419765777 ['LRFN5|p.G526Efs*4|1|0.29|ENSG00000165379|chr14:41891439-41891439|G/-|frameshift_variant', 'ENSG00000165379|ENST00000298119|LRFN5'] 88057 18915 QVVGGIYGV True PC9_epitope_Rep1 890.4861675993399 890.48506993586 77.541 2 -0.14802622918227465 0.03480890738172292 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 63063 8283 LNLAVSGR True PC9_epitope_Rep2 828.48175092524 828.48064993586 37.22 2 -0.14808149106118693 0.034846091613052355 0.9438714419765777 ['ENST00000596643.5_1_19:17622170-17622251:-|nuORF'] 39558 11719 HPHDRLMFP True PC9_epitope_Rep1 1148.55493294884 1148.55328490379 49.952 3 -0.1481011556692011 0.034846091613052355 0.9438714419765777 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3', 'nc|ENSG00000025434|Q13133-2|NR1H3'] 118118 19380 VAVAGLLTV True PC9_epitope_Rep6 841.52730413533 841.52620993586 87.197 2 -0.14810430528078058 0.0348586395501117 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000491494.1_1_3:184025740-184026364:+|nuORF'] 93712 6208 RTNSTFNQV True PC9_epitope_Rep3 1065.5203212619301 1065.51922993586 28.919 2 -0.14815575781546128 0.0348586395501117 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 73539 4840 NFKRLKKTL True NCI_RA007_Epitope_Rep2 1146.7237125261 1146.7220549037902 23.449 3 -0.1481980457008558 0.0348586395501117 0.9438714419765777 ['ENST00000275732.5_1_7:100279067-100279163:-|nuORF'] 90359 6368 RIIPRHLQL True NCI_RA007_Epitope_Rep3 1144.719295852 1144.7176649037901 32.051 3 -0.14820459295524718 0.0348586395501117 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 61577 19877 LLGPPPVGV True PC9_epitope_Rep1 847.51673945163 847.51619496793 81.275 1 -0.1482086316624042 0.0348586395501117 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1', 'ENST00000476727.6_1_9:130931703-130953136:-|nuORF'] 44365 19023 INAAATEVVNI True PC9_epitope_Rep2 1113.60298825673 1113.60188993586 78.537 2 -0.14822242638491273 0.0348586395501117 0.9438714419765777 ['ENSG00000089060|ENST00000680972|SLC8B1', 'nc|ENSG00000089060|Q6J4K2-2|SLC8B1'] 8114 3460 ATEQPLTAK True NCI_RA007_Epitope_Rep5 957.5131106231698 957.51200993586 19.073 2 -0.1482264806738118 0.0348586395501117 0.9438714419765777 ['ENSG00000120725|ENST00000394817|SIL1'] 45498 12697 ISERQAEVL True PC9_epitope_Rep1 1043.56112344475 1043.56002993586 53.711 2 -0.14823372764037057 0.0348586395501117 0.9438714419765777 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 46203 9322 ITDLADNIER True H1975_Epitope_Rep2 1158.5880664685799 1158.58696993586 40.817 2 -0.14823796478033233 0.0348586395501117 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 40574 6420 HSVVLNRV True PC9_epitope_Rep5 922.5348491272599 922.53374993586 29.671 2 -0.14826133840490013 0.0348586395501117 0.9438714419765777 ['STARD13|p.P963H|1|0.6|ENSG00000133121|chr13:33110032-33110032|G/T|missense_variant'] 84512 12212 QGTLSVVTV True PC9_epitope_Rep6 902.50729696674 902.5067449679301 58.339 1 -0.1483182003194729 0.0348738686693626 0.9438714419765777 ['CON__Q2UVX4'] 48437 12949 KEEEERESRWW True H1975_Epitope_Rep2 1562.7113694887398 1562.70973490379 54.923 3 -0.14831882200690952 0.0348738686693626 0.9438714419765777 ['ENST00000480003.5_1_1:207958419-207966884:+|nuORF'] 12517 14054 DLAGSIIGK True PC9_epitope_Rep4 872.4967322830399 872.49562993586 61.968 2 -0.14834653272057344 0.0348738686693626 0.9438714419765777 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 84959 7450 QIC[Carbamidomethyl]MDGALDP True H1975_Epitope_Rep1 1118.4736312427299 1118.4725299358602 33.659 2 -0.14836737972868252 0.0348738686693626 0.9438714419765777 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'ENST00000374161.7_3_10:50011336-50031259:+|nuORF'] 12849 10465 DLLDSQVQY True H1975_Epitope_Rep2 1079.51350454599 1079.5124099358602 45.271 2 -0.14838739192646644 0.0348738686693626 0.9438714419765777 ['nc|ENSG00000156735|O95429-2|BAG4', 'ENSG00000156735|ENST00000287322|BAG4'] 55607 14955 LCRREEDFI True PC9_epitope_Rep4 1179.57064258263 1179.56899490379 65.464 3 -0.14840770429469383 0.0348738686693626 0.9438714419765777 ['ENST00000355072.9_1_4:3244305-3244500:+|nuORF'] 132213 11392 VYKKYPNVF True PC9_epitope_Rep1 1156.6280808057597 1156.62643490379 48.699 3 -0.14845885681793305 0.0349103652783394 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 38120 6601 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 34.099 2 -0.14855303852427917 0.0349103652783394 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 80853 19545 PLVENLLKD True PC9_epitope_Rep2 1039.5913609438699 1039.59026993586 80.563 2 -0.1485675222555032 0.0349103652783394 0.9438714419765777 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'CAMSAP2-CARS|1|fusion', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 69315 14504 LVPPDQPEV True PC9_epitope_Rep5 992.51786165044 992.51676993586 60.789 2 -0.14872042342868358 0.0349806518683942 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 95615 13145 SATSLLHTV True PC9_epitope_Rep1 927.5025459394701 927.50144993586 55.427 2 -0.14873066075114072 0.0349806518683942 0.9438714419765777 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 5200 13719 ALPRGFLSP True PC9_epitope_Rep2 956.5443511817999 956.54324993586 58.061 2 -0.14880070583084878 0.0349806518683942 0.9438714419765777 ['nc|ENSG00000167566|Q9HCH0-4|NCKAP5L', 'ENST00000491441.1_1_12:50196735-50197827:-|nuORF'] 41243 10782 IAELETEKRD True H1975_Epitope_Rep3 1202.61428121642 1202.6131899358602 46.553 2 -0.14884874821172414 0.0349806518683942 0.9438714419765777 ['ENST00000497858.1_1_1:38027642-38030659:+|nuORF', 'ENST00000467277.1_1_1:38027150-38030659:+|nuORF', 'nc|ENSG00000163879|O14645-2|DNALI1', 'ENSG00000163879|ENST00000652629|DNALI1'] 125684 17795 VMVLARTEL True PC9_epitope_Rep6 1030.58450174162 1030.5834099358601 81.082 2 -0.14885681218545943 0.0349806518683942 0.9438714419765777 ['nc|ENSG00000142303|Q9H324|ADAMTS10', 'ENSG00000142303|ENST00000597188|ADAMTS10', 'nc|ENSG00000142303|Q9H324-2|ADAMTS10'] 139 8534 AADDSKLVL True NCI_RA007_Epitope_Rep4 930.5022115863 930.50110993586 39.619 2 -0.1488637953729804 0.0349806518683942 0.9438714419765777 ['nc|ENSG00000153046|Q9Y232-3|CDYL', 'ENST00000472453.5_1_6:4776866-4954287:+|nuORF', 'nc|ENSG00000153046|Q9Y232-4|CDYL', 'ENSG00000172352|ENST00000382407|CDY1B', 'ENSG00000182415|ENST00000250838|CDY2A', 'ENSG00000129873|ENST00000382867|CDY2B', 'ENSG00000153046|ENST00000397588|CDYL', 'ENSG00000172288|ENST00000306609|CDY1', 'nc|ENSG00000153046|Q9Y232|CDYL'] 86310 4615 QQHDVQEL True PC9_epitope_Rep6 995.46722305991 995.46612993586 25.054 2 -0.14890238817380375 0.0349806518683942 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 47479 16712 IYKFITERF True PC9_epitope_Rep2 1215.6651945904698 1215.66355490379 69.53 3 -0.1489113525702966 0.0349806518683942 0.9438714419765777 ['ENSG00000178919|ENST00000375123|FOXE1'] 20877 4348 EQRNRLYKK True NCI_RA007_Epitope_Rep4 1233.6942033029698 1233.69256490379 23.071 3 -0.1489113705330924 0.0349806518683942 0.9438714419765777 ['ENST00000515466.1_1_5:43576000-43602992:-|nuORF'] 39735 10128 HPWETVTTAA True PC9_epitope_Rep6 1111.52982331647 1111.5287299358602 49.573 2 -0.14895182410048077 0.0349806518683942 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 63586 20378 LPLLPAPGAAA True PC9_epitope_Rep2 989.5909670210498 989.58986993586 83.807 2 -0.14902814340972118 0.034996534996534996 0.9438714419765777 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 106766 18397 SYFRWRETL True PC9_epitope_Rep1 1256.6302060640796 1256.62855490379 75.554 3 -0.14904149716600484 0.034996534996534996 0.9438714419765777 ['ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6'] 82067 18897 PSVSTALSPA True PC9_epitope_Rep2 928.48656152216 928.48546993586 78.051 2 -0.14908022744360275 0.034996534996534996 0.9438714419765777 ['ENST00000338820.7_1_10:74095033-74095504:-|nuORF'] 6158 3980 APPHELTEEEK True NCI_RA007_Epitope_Rep2 1278.60919583598 1278.6075449037899 20.118 3 -0.14911517114920841 0.034996534996534996 0.9438714419765777 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000470286.1_1_2:172571934-172582592:+|nuORF'] 121588 13674 VGLADAGL True H1975_Epitope_Rep1 714.39120458534 714.39065496793 57.732 1 -0.14915058428042138 0.034996534996534996 0.9438714419765777 ['nc|ENSG00000157077|O95405-3|ZFYVE9', 'ENST00000361625.5_1_1:52698878-52729552:+|nuORF', 'nc|ENSG00000157077|O95405-2|ZFYVE9', 'ENSG00000157077|ENST00000287727|ZFYVE9'] 34962 17296 GQWYGPNTV True PC9_epitope_Rep5 1020.4664947839199 1020.46597496793 71.535 1 -0.14918504444527045 0.035033011876576 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 682 6199 AAVDAGM[Oxidation]AM True NCI_RA007_Epitope_Rep4 851.35172530591 851.3511749679301 30.454 1 -0.14923598731781967 0.035033011876576 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 116929 12859 TYPDVNNSI True PC9_epitope_Rep6 1021.4716397340101 1021.47054993586 60.978 2 -0.14928815302207588 0.035033011876576 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 46249 21940 ITDSSEVYV True PC9_epitope_Rep1 1011.4760564081099 1011.47494993586 89.21 2 -0.14941006935035844 0.035050236747892365 0.9438714419765777 ['ENSG00000114204|ENST00000264677|SERPINI2'] 126919 9223 VPVDTGVAA True PC9_epitope_Rep4 827.4388830537498 827.43778993586 43.074 2 -0.14941781323301384 0.035050236747892365 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 6823 10749 AQIDGTLST True PC9_epitope_Rep2 904.4501760134401 904.44962496793 46.665 1 -0.14943924240329298 0.035050236747892365 0.9438714419765777 ['ENSG00000101421|ENST00000217402|CHMP4B', 'nc|ENSG00000258469|P59074|CHMP4BP1'] 43506 12891 IIAPMMLVNL True PC9_epitope_Rep4 1113.62900940589 1113.62790993586 57.465 2 -0.14947358000665883 0.035064760108542946 0.9438714419765777 ['OR5D16|p.L287Vfs*11|1|0.12|ENSG00000205029|chr11:55839602-55839603|-/C|frameshift_variant', 'ENSG00000205029|ENST00000378396|OR5D16'] 118854 3741 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 19.464 2 -0.14950562024506886 0.035064760108542946 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 6998 8061 AQQPHIAGV True PC9_epitope_Rep1 919.4875645816699 919.48646993586 35.829 2 -0.14951770704694395 0.035064760108542946 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 136724 19902 YILLEDPQL True PC9_epitope_Rep6 1102.5910265907 1102.58992993586 89.208 2 -0.14952164249937883 0.035064760108542946 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 45659 11417 ISIRWFFK True NCI_RA007_Epitope_Rep1 1095.62293585567 1095.6218299358602 48.375 2 -0.14954021787413793 0.035064760108542946 0.9438714419765777 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'ENST00000485605.1_1_19:43015056-43023397:-|nuORF', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF'] 32953 20443 GISFADLF True H1975_Epitope_Rep1 868.43306939732 868.43252496793 85.025 1 -0.1495776631394647 0.035064760108542946 0.9438714419765777 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 94187 19743 RWLWRQRIRLY True PC9_epitope_Rep2 1644.9477326470399 1644.94662993586 81.331 2 -0.1495923091552436 0.035064760108542946 0.9438714419765777 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 56845 8068 LEDETAIK True PC9_epitope_Rep1 917.4705771048499 917.46948993586 35.857 2 -0.14966248574766725 0.03510257495862361 0.9438714419765777 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'ENSG00000118997|ENST00000312428|DNAH7'] 86201 9487 QPVLSQTEA True PC9_epitope_Rep1 971.4923751785899 971.49126993586 41.348 2 -0.14969605335087158 0.03511979216780525 0.9438714419765777 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF', 'ENST00000493673.1_1_1:151373717-151374107:+|nuORF'] 117346 6682 VAAQFEECREK True H1975_Epitope_Rep1 1308.6132356705996 1308.6121299358601 30.755 2 -0.14969821480863052 0.03511979216780525 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13'] 134273 11144 WRRWCWRWPWR True NCI_RA007_Epitope_Rep2 1772.8735221609597 1772.87188490379 47.928 3 -0.14974454113715713 0.03511979216780525 0.9438714419765777 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 220 19581 AAFTAFEEA True PC9_epitope_Rep1 955.4287122928698 955.42760993586 80.145 2 -0.14985332928178402 0.03517684639956895 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 80652 18600 PLPPPLPPP True PC9_epitope_Rep2 923.54803957991 923.54694993586 76.897 2 -0.14988073604437796 0.035190672259206524 0.9438714419765777 ['ENST00000361272.8_2_8:17102747-17104366:-|nuORF'] 22047 7169 ESRKDMVV True PC9_epitope_Rep2 962.4855159763399 962.48440993586 32.966 2 -0.14990868205552543 0.035190672259206524 0.9438714419765777 ['ENSG00000106038|ENST00000496902|EVX1'] 66738 21694 LSTRLTLLL True PC9_epitope_Rep2 1028.65938093404 1028.65828993586 88.923 2 -0.1499302869987717 0.035190672259206524 0.9438714419765777 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 117831 4757 VAPAPAVVK True NCI_RA007_Epitope_Rep4 850.5276384885 850.52654993586 24.731 2 -0.14993799350733697 0.035190672259206524 0.9438714419765777 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF', 'ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF'] 36070 11764 GVEAGPDLLQ True H1975_Epitope_Rep3 997.5080252427299 997.5074749679301 50.394 1 -0.14993852314178627 0.035190672259206524 0.9438714419765777 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 55514 16643 LAVVAGVAAE True PC9_epitope_Rep5 898.5123823471799 898.51128993586 69.022 2 -0.14996786276346236 0.035190672259206524 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 2566 3992 AERPPGVAA True NCI_RA007_Epitope_Rep4 866.4610154806599 866.45990993586 21.607 2 -0.14997573093458802 0.035190672259206524 0.9438714419765777 ['ENST00000545260.5_2_10:35104042-35104177:-|nuORF'] 125930 9160 VPAAAAVAA True PC9_epitope_Rep2 739.42283906679 739.42229496793 40.573 1 -0.15001244918461062 0.035190672259206524 0.9438714419765777 ['ENSG00000130699|ENST00000252996|TAF4'] 85584 20415 QLLNWVYLSL True PC9_epitope_Rep6 1247.69140933831 1247.6903099358601 91.23 2 -0.1500263752993562 0.035206525712306896 0.9438714419765777 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 34338 13391 GPSGCLVPA True PC9_epitope_Rep5 799.3898246863499 799.3887299358599 56.525 2 -0.15003110954143167 0.035206525712306896 0.9438714419765777 ['ENSG00000183291|ENST00000331835|SELENOF', 'ENST00000331835.9_2_1:87346375-87379803:-|nuORF', 'nc|ENSG00000183291|O60613-2|SELENOF'] 18055 13675 EIIRQLNGV True PC9_epitope_Rep5 1040.59784330664 1040.59727496793 57.626 1 -0.150056860138679 0.035206525712306896 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 103741 8050 SREVLSLSP True H1975_Epitope_Rep2 986.53965972418 986.53856993586 35.913 2 -0.15006841500082507 0.035206525712306896 0.9438714419765777 ['ENST00000461307.5_1_22:18347351-18347441:-|nuORF'] 72332 15587 MTDGFQFEY True H1975_Epitope_Rep2 1136.44846176128 1136.44787496793 65.111 1 -0.15007005420433556 0.035206525712306896 0.9438714419765777 ['ENSG00000108821|ENST00000225964|COL1A1'] 48438 11557 KEEEERWRRKV True NCI_RA007_Epitope_Rep1 1543.8219229972296 1543.8202649037903 48.923 3 -0.1501520436219803 0.03524229074889868 0.9438714419765777 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4'] 33239 8634 GLAEVAAAV True NCI_RA007_Epitope_Rep1 799.4439684341899 799.44286993586 37.586 2 -0.1501709836803796 0.03524229074889868 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 101972 13690 SPMPGTLTA True PC9_epitope_Rep5 873.4266041178901 873.4260549679301 57.685 1 -0.15021763932250007 0.03524229074889868 0.9438714419765777 ['ENSG00000113456|ENST00000382038|RAD1'] 90866 8573 RKYPYPMPP True NCI_RA007_Epitope_Rep3 1147.5848360947898 1147.5837299358602 40.793 2 -0.15022932073033948 0.03524229074889868 0.9438714419765777 ['nc|ENSG00000008277|Q9P0K1-5|ADAM22', 'nc|ENSG00000008277|Q9P0K1-2|ADAM22', 'nc|ENSG00000008277|Q9P0K1|ADAM22', 'ENSG00000008277|ENST00000413139|ADAM22'] 42694 11571 IEWDKPPVP True NCI_RA007_Epitope_Rep3 1079.56514619603 1079.56404993586 52.645 2 -0.15024504794968807 0.035260849492151435 0.9438714419765777 ['ENSG00000154447|ENST00000284637|SH3RF1', 'nc|ENSG00000154447|Q7Z6J0-3|SH3RF1'] 33808 9594 GLTPLATLKND True NCI_RA007_Epitope_Rep2 1141.63428838501 1141.6331899358602 41.933 2 -0.15028506257818944 0.03527805028180122 0.9438714419765777 ['nc|ENSG00000131941|Q8IUC4-2|RHPN2', 'ENSG00000131941|ENST00000254260|RHPN2', 'ENST00000566346.2_1_16:33401403-33412789:+|nuORF', 'nc|ENSG00000258628|A8MT19|RHPN2P1'] 91512 7362 RPAAGFVA True PC9_epitope_Rep3 787.4340724568299 787.43296993586 33.327 2 -0.15029863931268897 0.03527805028180122 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 85986 14996 QPHIAGVFSA True PC9_epitope_Rep1 1025.52942939365 1025.52832993586 62.501 2 -0.1503147481390362 0.03527805028180122 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 104814 12979 STDVSDLLHQY True H1975_Epitope_Rep2 1276.5935457718401 1276.59244993586 55.04 2 -0.15032699570280794 0.03529592798476601 0.9438714419765777 ['nc|ENSG00000204264|P28062-2|PSMB8', 'ENSG00000204264|ENST00000374882|PSMB8'] 120363 16918 VFRHNLEI True PC9_epitope_Rep5 1026.5610638751 1026.5599699358602 70.092 2 -0.15036531984845783 0.03529592798476601 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 16324 8980 EEKAALEEY True H1975_Epitope_Rep3 1080.4975201286798 1080.49642993586 39.537 2 -0.15039645420149 0.03531380431228482 0.9438714419765777 ['ENSG00000142621|ENST00000688493|FHAD1'] 26094 8792 FHEGEAVSV True PC9_epitope_Rep2 973.4505103666098 973.44940993586 39.172 2 -0.15041159141558583 0.03531380431228482 0.9438714419765777 ['ENSG00000156521|ENST00000287078|TYSND1'] 118759 6046 VEDRKEVLG True H1975_Epitope_Rep3 1043.56112344475 1043.56002993586 28.269 2 -0.15042770735967423 0.03533167926451638 0.9438714419765777 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.Q2856Rfs*14|1|0.22|ENSG00000007174|chr17:11807876-11807876|C/-|frameshift_variant', 'DNAH9|p.R1341Gfs*27|1|0.35|ENSG00000007174|chr17:11689841-11689841|C/-|frameshift_variant', 'DNAH9|p.A1913Vfs*27|1|0.25|ENSG00000007174|chr17:11727846-11727846|C/-|frameshift_variant'] 850 7030 ADGVASTPSLN True NCI_RA007_Epitope_Rep5 1030.49310345458 1030.49200993586 33.719 2 -0.1504361993117876 0.03533167926451638 0.9438714419765777 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-8|MECOM', 'MECOM|p.A481Cfs*2|2|0.27|ENSG00000085276|chr3:169115867-169115868|-/A|frameshift_variant', 'nc|ENSG00000085276|Q03112-9|MECOM', 'ENST00000485957.1_1_3:168867411-169381160:-|nuORF'] 107230 7051 SYPRRFSTL True NCI_RA007_Epitope_Rep4 1125.59309227937 1125.59143490379 33.747 3 -0.150523744528476 0.03534887299023002 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 24467 16418 FAIDPHLLL True NCI_RA007_Epitope_Rep3 1037.59096702105 1037.5898699358602 72.327 2 -0.1505491522723409 0.03534887299023002 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 78068 12041 PALQSQSPV True PC9_epitope_Rep3 925.4868958753299 925.48578993586 51.352 2 -0.15063185007175808 0.03534887299023002 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 109555 4466 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 24.362 2 -0.15069913734430834 0.03536606473201408 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 100538 17537 SLPTAPLAP True PC9_epitope_Rep2 865.49091862661 865.48982993586 72.724 2 -0.15071067255504694 0.03536606473201408 0.9438714419765777 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 18598 5813 ELAEREWERPP True H1975_Epitope_Rep3 1410.6891774921799 1410.68752490379 27.382 3 -0.15075741750677807 0.03536606473201408 0.9438714419765777 ['ENSG00000136367|ENST00000419474|ZFHX2'] 56097 10140 LDLLPPSELHA True H1975_Epitope_Rep3 1203.64993844915 1203.6488499358602 44.047 2 -0.15079458890262648 0.03540112299053919 0.9438714419765777 ['ENST00000360085.6_1_17:42043665-42081769:-|nuORF'] 64717 7385 LRNRFASP True H1975_Epitope_Rep2 959.5300980999899 959.52900993586 33.346 2 -0.15080799914200188 0.03540112299053919 0.9438714419765777 ['ENST00000480941.1_1_1:46126892-46152773:-|nuORF'] 131598 7757 VVWQRRHAR True PC9_epitope_Rep6 1206.68464167878 1206.6829949037901 39.198 3 -0.15081995924747246 0.03540112299053919 0.9438714419765777 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 38218 4400 HEVIVSAA True NCI_RA007_Epitope_Rep3 824.43921740692 824.43812993586 24.083 2 -0.150873376349657 0.03540112299053919 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 56615 6787 LDYHTSSCFR True H1975_Epitope_Rep3 1227.53425707391 1227.5326049037901 31.06 3 -0.15088368079918568 0.03540112299053919 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENST00000560078.1_1_15:41100333-41100738:+|nuORF'] 107944 15674 TAYDNFVEL True NCI_RA007_Epitope_Rep5 1070.49204082542 1070.49094993586 67.005 2 -0.15091415918223797 0.03541626610267256 0.9438714419765777 ['nc|ENSG00000170248|Q8WUM4-2|PDCD6IP', 'ENSG00000170248|ENST00000307296|PDCD6IP'] 100556 19430 SLPVTIPSA True PC9_epitope_Rep2 883.5014833103099 883.5009349679301 80.116 1 -0.15091558578405045 0.03541626610267256 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 75329 9242 NPYYGGESA True PC9_epitope_Rep1 956.3875757568799 956.3870249679301 40.401 1 -0.15096923953387703 0.03541626610267256 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 92059 7813 RPRVTEPISA True PC9_epitope_Rep1 1124.6302060640799 1124.62855490379 34.877 3 -0.15097350456315997 0.03541626610267256 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 6207 14698 APRAALVFA True PC9_epitope_Rep5 914.5337864980999 914.53268993586 61.539 2 -0.15099095532433596 0.03541626610267256 0.9438714419765777 ['ENSG00000170006|ENST00000304385|TMEM154'] 26024 21189 FHDGFLLEV True PC9_epitope_Rep3 1075.53384606775 1075.53274993586 86.791 2 -0.1510358214819029 0.03541626610267256 0.9438714419765777 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'ENST00000586887.1_1_18:12698966-12699161:-|nuORF', 'ENST00000593250.5_1_18:12691430-12699161:-|nuORF'] 13990 5510 DRRRRLTFH True NCI_RA007_Epitope_Rep4 1255.70102001891 1255.69936490379 27.786 3 -0.15111106695906246 0.035452675292715286 0.9438714419765777 ['nc|ENSG00000116885|Q8WVF1-4|OSCP1'] 84627 13427 QHDPYITSI True PC9_epitope_Rep1 1072.5189242796 1072.5178299358602 56.508 2 -0.1511551489511354 0.035452675292715286 0.9438714419765777 ['nc|ENSG00000272886|Q9NPI6-2|DCP1A', 'ENSG00000272886|ENST00000610213|DCP1A'] 108257 15385 TEAPPIIFA True H1975_Epitope_Rep2 957.5171333744499 957.51602993586 64.337 2 -0.15116502891748898 0.035452675292715286 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 32086 5786 GEYDKAIQA True NCI_RA007_Epitope_Rep4 993.4767251144498 993.47562993586 28.878 2 -0.15121598372053188 0.03547121928711501 0.9438714419765777 ['ENSG00000198677|ENST00000358746|SKIC3'] 81434 7496 PQEVGQSI True PC9_epitope_Rep4 856.42904664604 856.4279499358599 36.196 2 -0.15124993379012666 0.03550830513688096 0.9438714419765777 ['ENST00000242770.9_1_19:13255392-13255605:-|nuORF'] 21982 15710 ESLSYLSIL True H1975_Epitope_Rep3 1023.5488274255499 1023.54772993586 65.865 2 -0.1513102926282385 0.03550830513688096 0.9438714419765777 ['ENST00000532378.5_1_11:14901840-14912470:-|nuORF'] 102587 15709 SQANIAQVL True PC9_epitope_Rep6 942.5134449763399 942.51289496793 72.641 1 -0.15131992488422882 0.03552616402014687 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 18791 9943 ELDSDSEDLDP True PC9_epitope_Rep1 1233.48847156661 1233.4873699358602 43.108 2 -0.15133492012659416 0.03552616402014687 0.9438714419765777 ['ENSG00000198816|ENST00000597229|ZNF358'] 84821 11509 QHLLDTNQL True PC9_epitope_Rep6 1080.5563724174801 1080.55526993586 55.348 2 -0.1514941452776824 0.03558110030371766 0.9438714419765777 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF', 'EHF|p.D69V|2|0.38|ENSG00000135373|chr11:34646547-34646547|A/T|missense_variant'] 109977 4909 THSNMANAL True PC9_epitope_Rep6 957.4338147566499 957.43270993586 26.438 2 -0.15151155946568273 0.03558110030371766 0.9438714419765777 ['ENSG00000169756|ENST00000544547|LIMS1'] 133248 10176 WEEETVPTTA True H1975_Epitope_Rep2 1161.51898384925 1161.51847496793 44.144 1 -0.1515270631773989 0.03558110030371766 0.9438714419765777 ['ENSG00000227057|ENST00000374617|WDR46', 'ENST00000477718.5_1_6:33256133-33256956:-|nuORF', 'ENST00000468157.5_1_6:33255793-33256956:-|nuORF'] 74069 12207 NHTIYINNL True PC9_epitope_Rep6 1100.5614577979202 1100.56036993586 58.32 2 -0.15152740445141374 0.03558110030371766 0.9438714419765777 ['ENSG00000077312|ENST00000243563|SNRPA', 'ENST00000598923.1_1_19:41257313-41268988:+|nuORF', 'ENST00000599570.5_1_19:41257313-41263396:+|nuORF'] 105386 18295 SVAAQLTGV True PC9_epitope_Rep5 844.4654321547599 844.46432993586 75.386 2 -0.1515510493338638 0.035596901608780054 0.9438714419765777 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 77622 12616 NYVKDLSRL True PC9_epitope_Rep2 1106.6084079903399 1106.60730993586 53.838 2 -0.15159259161865396 0.035596901608780054 0.9438714419765777 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL', 'ENST00000497677.5_1_2:219264813-219268311:+|nuORF', 'ENST00000464255.1_1_2:219265892-219269145:+|nuORF', 'nc|ENSG00000144579|Q9GZU7-3|CTDSP1', 'nc|ENSG00000144579|Q9GZU7-2|CTDSP1', 'ENSG00000144579|ENST00000273062|CTDSP1'] 116895 18520 TYPAELNNI True PC9_epitope_Rep5 1033.50802524273 1033.5069299358602 76.262 2 -0.1515969554524733 0.035596901608780054 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 17211 13891 EHAGVISVL True PC9_epitope_Rep4 923.5076313199099 923.50652993586 61.333 2 -0.15161260187186393 0.035596901608780054 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 5854 8165 APGKGILAA True PC9_epitope_Rep5 796.4806882960798 796.47958993586 36.348 2 -0.1516267862980606 0.035596901608780054 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 9202 19406 AVPEVAVYL True PC9_epitope_Rep6 959.5327834385898 959.53168993586 87.301 2 -0.1516369797242551 0.035613384328573354 0.9438714419765777 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 119703 14406 VETDQRKM True NCI_RA007_Epitope_Rep1 1005.4913296327699 1005.49022993586 60.078 2 -0.1516415113789188 0.035613384328573354 0.9438714419765777 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 84035 7792 QEPKNSEPHDP True H1975_Epitope_Rep1 1276.5683936531598 1276.5672899358601 34.927 2 -0.15168774624574544 0.035613384328573354 0.9438714419765777 ['RTL3|p.Q159H|1|0.66|ENSG00000179300|chrX:78657944-78657944|C/A|missense_variant'] 47281 18895 IYFCHSCQLY True H1975_Epitope_Rep3 1275.54165095347 1275.54054993586 79.25 2 -0.15169374599183288 0.035613384328573354 0.9438714419765777 ['ENSG00000164675|ENST00000324698|IQUB'] 110036 7456 THVGPTPAI True PC9_epitope_Rep6 891.48141657207 891.48030993586 37.916 2 -0.15179297591795887 0.03566213204211821 0.9438714419765777 ['ENSG00000157259|ENST00000287957|GATAD1'] 46379 11573 ITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep1 1118.5277749905702 1118.52727496793 48.985 1 -0.1517974796018919 0.03566213204211821 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 89074 4430 REERPPTLSA True H1975_Epitope_Rep2 1154.6043852390599 1154.6027249037902 22.151 3 -0.1518692826314193 0.03566213204211821 0.9438714419765777 ['ENSG00000166452|ENST00000309377|AKIP1', 'nc|ENSG00000166452|Q9NQ31-2|AKIP1'] 12599 13322 DLDTALPGT True PC9_epitope_Rep3 901.4392769765699 901.43816993586 56.277 2 -0.15193906510883037 0.03566213204211821 0.9438714419765777 ['ENSG00000269855|ENST00000601382|RNF225'] 125683 18908 VMVLARTEL True PC9_epitope_Rep4 1030.58450174162 1030.5834099358601 80.816 2 -0.15195194962112243 0.03566213204211821 0.9438714419765777 ['nc|ENSG00000142303|Q9H324|ADAMTS10', 'ENSG00000142303|ENST00000597188|ADAMTS10', 'nc|ENSG00000142303|Q9H324-2|ADAMTS10'] 107609 6660 TAGPAVHL True H1975_Epitope_Rep3 764.41808803952 764.41698993586 30.57 2 -0.15196860509142554 0.03566213204211821 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 124462 9085 VLEVLEDKEK True NCI_RA007_Epitope_Rep1 1200.66016877968 1200.65906993586 39.338 2 -0.1520567930482167 0.03566213204211821 0.9438714419765777 ['nc|ENSG00000131037|Q8TE68-3|EPS8L1'] 123183 15495 VHIGQVIM True PC9_epitope_Rep1 895.4949584612299 895.49386993586 64.423 2 -0.152059235605322 0.03566213204211821 0.9438714419765777 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000491035.5_1_X:153628724-153629192:+|nuORF', 'ENST00000467168.5_1_X:153626860-153629039:+|nuORF', 'ENST00000431607.1_1_9:119942983-119943337:-|nuORF'] 78052 5387 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 27.45 2 -0.15206766071223748 0.03566213204211821 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 56612 7685 LDYEVEAYRR True H1975_Epitope_Rep1 1312.6411646706 1312.64006993586 34.526 2 -0.1520947856414196 0.03566213204211821 0.9438714419765777 ['ENSG00000229549|ENST00000287721|TSPY8'] 23861 11566 EYMEHTYLI True NCI_RA007_Epitope_Rep3 1197.5376111188498 1197.53650993586 52.625 2 -0.15212745869220992 0.03566213204211821 0.9438714419765777 ['ENSG00000141447|ENST00000319481|OSBPL1A', 'nc|ENSG00000141447|Q9BXW6-2|OSBPL1A', 'nc|ENSG00000141447|Q9BXW6-4|OSBPL1A'] 130866 4670 VVGPSHEV True PC9_epitope_Rep1 822.42356734278 822.42246993586 22.834 2 -0.1521685867244489 0.03566213204211821 0.9438714419765777 ['ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 123489 14722 VIGPPVVL True H1975_Epitope_Rep1 792.5109257952 792.51037496793 61.849 1 -0.1522275947694704 0.03566213204211821 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 4012 17061 AHIIALESI True PC9_epitope_Rep4 965.5545815123301 965.55348993586 73.622 2 -0.1522638838991982 0.035677233429394814 0.9438714419765777 ['nc|ENSG00000134824|O95864-3|FADS2', 'nc|ENSG00000134824|O95864-4|FADS2', 'nc|ENSG00000134824|O95864-2|FADS2', 'ENSG00000134824|ENST00000278840|FADS2', 'ENST00000521571.6_1_11:61607769-61608033:+|nuORF'] 63481 9471 LPHGFTNM[Oxidation]A True PC9_epitope_Rep5 1002.4593016089401 1002.4582099358599 41.387 2 -0.15226720499086893 0.035677233429394814 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 6553 16108 APVPGIPTA True PC9_epitope_Rep1 821.46470387877 821.46360993586 66.776 2 -0.1522707873517679 0.035677233429394814 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 9174 9569 AVNSATGVPTV True NCI_RA007_Epitope_Rep1 1014.5345743437399 1014.53346993586 41.22 2 -0.1522891373008507 0.035677233429394814 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 4604 14932 ALAFSDETL True PC9_epitope_Rep4 965.47057710485 965.46948993586 65.376 2 -0.15231115194965586 0.035677233429394814 0.9438714419765777 ['ENSG00000262655|ENST00000576479|SPON1'] 77010 6209 NVTTEVKSV True PC9_epitope_Rep2 975.5236753068699 975.52256993586 29.279 2 -0.15231658351477925 0.035677233429394814 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000547505.2_1_12:44054314-44054545:+|nuORF'] 21724 17403 ESAFEFLSSA True H1975_Epitope_Rep1 1086.48695544498 1086.48637496793 72.415 1 -0.1523297822031471 0.03569575992776316 0.9438714419765777 ['nc|ENSG00000014641|P40925-2|MDH1', 'ENSG00000014641|ENST00000233114|MDH1', 'nc|ENSG00000014641|P40925-3|MDH1'] 31545 13694 GEFNFSEV True NCI_RA007_Epitope_Rep5 927.3974121645899 927.39630993586 59.357 2 -0.15233463408294004 0.03571291351289046 0.9438714419765777 ['nc|ENSG00000136193|Q12765-3|SCRN1', 'ENSG00000136193|ENST00000242059|SCRN1', 'nc|ENSG00000136193|Q12765-2|SCRN1'] 28718 12134 FSVSSTLTDHK True H1975_Epitope_Rep3 1220.60371653272 1220.60260993586 51.842 2 -0.15243501774753582 0.03571291351289046 0.9438714419765777 ['ZNF479|p.Y493Sfs*21|1|0.41|ENSG00000185177|chr7:57119937-57119937|T/-|frameshift_variant', 'ENSG00000185177|ENST00000319636|ZNF479'] 101649 9991 SPFPGHVGA True PC9_epitope_Rep3 867.42390169595 867.42280993586 43.387 2 -0.15245251024020057 0.03571291351289046 0.9438714419765777 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF', 'ENST00000437505.5_1_7:100465025-100465781:+|nuORF', 'ENST00000496260.1_1_7:100465025-100465611:+|nuORF', 'ENST00000417475.5_1_7:100465025-100465781:+|nuORF'] 82985 11342 PYERPPFAQI True NCI_RA007_Epitope_Rep4 1216.6240580544797 1216.62296993586 50.531 2 -0.15247916851968757 0.03575064835270387 0.9438714419765777 ['ENSG00000066056|ENST00000372476|TIE1'] 24509 18169 FAITAIKGV True PC9_epitope_Rep3 918.5538532363399 918.55274993586 75.089 2 -0.15251916521107653 0.035767110393976065 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF', 'ENST00000496813.5_1_6:33239896-33244045:+|nuORF', 'ENSG00000231500|ENST00000439602|RPS18', 'ENST00000495909.2_1_5:90650295-90650631:+|nuORF'] 64391 8327 LQQQRIQQL True NCI_RA007_Epitope_Rep4 1153.6567551650899 1153.65564993586 38.843 2 -0.15254859015367384 0.035767110393976065 0.9438714419765777 ['ENST00000567762.1_1_15:72767286-72810465:+|nuORF'] 98691 13451 SIQRTCLDL True PC9_epitope_Rep6 1047.5382798251899 1047.5371899358602 63.431 2 -0.15256616770495768 0.035767110393976065 0.9438714419765777 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1'] 122612 15024 VGTLGAWLS True H1975_Epitope_Rep1 902.48616759934 902.48561496793 63.038 1 -0.1526150526953382 0.035767110393976065 0.9438714419765777 ['ENST00000580170.5_1_18:7567593-7774159:+|nuORF'] 1324 9953 AEEADLIQA True H1975_Epitope_Rep3 958.4607406971398 958.4596499358599 43.318 2 -0.1526540921387298 0.03578219533275713 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 6142 17754 APNPVVFVA True PC9_epitope_Rep6 912.5069030439199 912.50580993586 80.925 2 -0.15266823382784217 0.03578219533275713 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 83124 17230 PYPPPPPEF True PC9_epitope_Rep6 1039.5014833103098 1039.50038993586 78.871 2 -0.1526906009558435 0.03578219533275713 0.9438714419765777 ['ENST00000416574.6_1_17:73843478-73851408:-|nuORF', 'ENSG00000132471|ENST00000254806|WBP2'] 2775 8065 AEVDAAMAA True NCI_RA007_Epitope_Rep1 847.3745685450299 847.37346993586 35.369 2 -0.15269312646518277 0.03578219533275713 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 111696 17889 TLPPSALAP True PC9_epitope_Rep1 865.49091862661 865.48982993586 73.602 2 -0.15269564695725896 0.03578219533275713 0.9438714419765777 ['ENST00000483551.6_1_15:69082366-69082516:-|nuORF'] 118388 3625 VDKTRDTLPPQ True NCI_RA007_Epitope_Rep5 1268.67246479888 1268.6708249037902 19.914 3 -0.15269602301371954 0.03578219533275713 0.9438714419765777 ['ENSG00000166669|ENST00000562102|ATF7IP2'] 100954 9555 SLSREVAVV True PC9_epitope_Rep3 958.5447451046198 958.54364993586 41.704 2 -0.1527367984779994 0.035800026888432215 0.9438714419765777 ['ENSG00000188112|ENST00000341865|C6orf132'] 111078 22680 TLEDIEIIQ True PC9_epitope_Rep3 1072.5652057656798 1072.5641099358602 92.511 2 -0.15281550102604774 0.035800026888432215 0.9438714419765777 ['ENST00000456360.5_1_Y:23556925-23559248:-|nuORF'] 16723 10905 EEWGWNDIHC True H1975_Epitope_Rep3 1287.49787156519 1287.4967699358601 47.033 2 -0.15286703886955505 0.03583499769549854 0.9438714419765777 ['ENSG00000198178|ENST00000360345|CLEC4C', 'nc|ENSG00000198178|Q8WTT0-2|CLEC4C', 'ENST00000537530.1_1_12:7882194-7883423:-|nuORF'] 2661 6474 AETAAVTVA True NCI_RA007_Epitope_Rep4 831.43379767331 831.43270993586 31.5 2 -0.15287386383938717 0.03583499769549854 0.9438714419765777 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 46035 13303 ISVPFGNSSP True PC9_epitope_Rep2 1003.49746055903 1003.49636993586 56.446 2 -0.15289055942646537 0.03583499769549854 0.9438714419765777 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 130317 16275 VTTQSLLF True H1975_Epitope_Rep1 907.5014833103098 907.5009349679301 67.955 1 -0.15296980964943455 0.03583499769549854 0.9438714419765777 ['ENSG00000186910|ENST00000334708|SERPINA11'] 134998 11121 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.38026993586 47.662 2 -0.15296984386854093 0.03583499769549854 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 22096 12720 ESVFENFYIYY True H1975_Epitope_Rep2 1472.6499980188 1472.64890993586 54.028 2 -0.1530990323259187 0.03587202826746553 0.9438714419765777 ['ENST00000299638.7_2_15:58008553-58008757:+|nuORF'] 97582 19649 SGYPGLLNGV True PC9_epitope_Rep4 975.5025459394699 975.50144993586 83.698 2 -0.15312605217088548 0.03587202826746553 0.9438714419765777 ['ENSG00000140006|ENST00000620954|WDR89'] 17424 5054 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 27.08 3 -0.1531770115859144 0.03590767694611928 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 36089 7942 GVEGAIHA True PC9_epitope_Rep1 752.3817025308 752.38060993586 35.371 2 -0.15318681685896401 0.03590767694611928 0.9438714419765777 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK', 'TBCK|p.F654Sfs*7|1|0.1|ENSG00000145348|chr4:106193707-106193707|A/-|frameshift_variant'] 61620 21620 LLGTIIQL True PC9_epitope_Rep1 869.55860426361 869.55750993586 87.987 2 -0.1531881976239624 0.03590767694611928 0.9438714419765777 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'ENST00000488988.5_1_3:52422617-52433783:+|nuORF', 'ENST00000486752.5_1_3:52422617-52434459:+|nuORF'] 24 9067 AAAAEVLGL True H1975_Epitope_Rep2 813.4596184983299 813.4590749679301 39.829 1 -0.15324226938232915 0.03590767694611928 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 58881 18956 LFSYSQIF True NCI_RA007_Epitope_Rep4 1003.5014833103099 1003.50038993586 81.991 2 -0.1532901622919259 0.035926189058929706 0.9438714419765777 ['ENSG00000127529|ENST00000248072|OR7C2'] 140111 21253 YVPPELITL True PC9_epitope_Rep4 1043.59029831471 1043.58977496793 89.916 1 -0.15333369874466135 0.03594124988000384 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 82684 6699 PVNSRANQDF True PC9_epitope_Rep1 1146.5417849825 1146.54013490379 30.57 3 -0.15338131022136284 0.03594124988000384 0.9438714419765777 ['ENSG00000023445|ENST00000263464|BIRC3'] 112882 11325 TPPPGLASA True PC9_epitope_Rep3 809.42831837005 809.4272299358599 48.568 2 -0.15341743018879916 0.03594124988000384 0.9438714419765777 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 5853 6759 APGKGILAA True PC9_epitope_Rep4 796.4806882960798 796.47958993586 33.196 2 -0.1534507360268965 0.03594124988000384 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 62106 9885 LLNQTQVE True PC9_epitope_Rep2 943.4974605590298 943.49636993586 43.356 2 -0.15347569513152773 0.03594124988000384 0.9438714419765777 ['ENST00000486166.1_1_X:16875796-16876897:-|nuORF'] 105955 22704 SVLGALIGV True PC9_epitope_Rep2 827.5116540711899 827.51054993586 92.826 2 -0.15349661354656408 0.03594124988000384 0.9438714419765777 ['nc|ENSG00000164051|Q96ER9-2|CCDC51', 'ENSG00000164051|ENST00000395694|CCDC51'] 18113 14600 EILNEYFY True H1975_Epitope_Rep2 1089.50187723313 1089.5007899358602 61.317 2 -0.15357014362133703 0.03595768780356697 0.9438714419765777 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3', 'nc|ENSG00000167081|P40426-4|PBX3', 'ENST00000538998.1_1_9:128606084-128725334:+|nuORF', 'nc|ENSG00000167081|P40426-2|PBX3', 'nc|ENSG00000185630|P40424-2|PBX1', 'nc|ENSG00000185630|P40424-3|PBX1', 'ENSG00000185630|ENST00000420696|PBX1'] 106107 2611 SVNGKVLSK True NCI_RA007_Epitope_Rep3 930.5498304850599 930.54872993586 14.737 2 -0.1536163590972964 0.03595768780356697 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 70228 20114 LYLTATHLL True PC9_epitope_Rep5 1043.60153170475 1043.6004299358601 82.415 2 -0.15363600015509302 0.03595768780356697 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 62456 14027 LLSKRLVD True PC9_epitope_Rep4 942.5862159937799 942.58510993586 61.866 2 -0.153637923580117 0.03595768780356697 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 107134 17480 SYMLVNENRF True PC9_epitope_Rep5 1271.5968573304701 1271.59522490379 72.239 3 -0.15370398620889023 0.035994701579927436 0.9438714419765777 ['ENSG00000182195|ENST00000370526|LDOC1'] 112485 5945 TNRPPLSLSR True PC9_epitope_Rep4 1139.64110510095 1139.63944490379 29.797 3 -0.1537333877958723 0.035994701579927436 0.9438714419765777 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF'] 88360 12928 QYMKIISSF True NCI_RA007_Epitope_Rep5 1115.5685173243098 1115.56740993586 56.409 2 -0.15381928725730168 0.0360125160770161 0.9438714419765777 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 5231 12542 ALQEMVHQV True PC9_epitope_Rep3 1053.52771514149 1053.52660993586 53.265 2 -0.15386994141258334 0.0360125160770161 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 93272 8568 RRRRWWSVTWW True NCI_RA007_Epitope_Rep2 1673.8803813632098 1673.87928993586 37.972 2 -0.15393196973249387 0.0360439897894555 0.9438714419765777 ['ENST00000380486.3_2_21:43339056-43362335:-|nuORF'] 32508 8073 GGPGGVGGL True NCI_RA007_Epitope_Rep4 669.34458874609 669.34404496793 37.832 1 -0.1539482392403194 0.0360439897894555 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 101622 15688 SPFGSITSA True PC9_epitope_Rep4 865.4181476091701 865.41704993586 68.271 2 -0.15396180181294591 0.0360439897894555 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 101930 19879 SPLPGLASV True PC9_epitope_Rep2 839.47526856247 839.47416993586 81.857 2 -0.1539783949530986 0.0360439897894555 0.9438714419765777 ['FOSL2|p.E197Afs*60|1|0.34|ENSG00000075426|chr2:28412057-28412061|AGCGC/-|frameshift_variant', 'nc|ENSG00000075426|P15408-3|FOSL2', 'nc|ENSG00000075426|P15408-2|FOSL2', 'ENSG00000075426|ENST00000264716|FOSL2'] 110230 15714 TIELWGYEE True H1975_Epitope_Rep2 1138.51825557326 1138.51714993586 65.612 2 -0.15398393443912556 0.0360439897894555 0.9438714419765777 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF', 'SUSD2|p.A258Efs*20|1|0.17|ENSG00000099994|chr22:24184931-24184931|C/-|frameshift_variant'] 95097 9775 RYTERVDYL True PC9_epitope_Rep2 1213.6091362663299 1213.60750490379 42.937 3 -0.15400585698108504 0.0360439897894555 0.9438714419765777 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13', 'USP13|p.I633*|1|0.14|ENSG00000058056|chr3:179754823-179754823|C/-|frameshift_variant'] 46141 8276 ITAPPGTAA True PC9_epitope_Rep5 797.42831837005 797.4272299358599 36.772 2 -0.15405351482554425 0.0360439897894555 0.9438714419765777 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 66576 9325 LSSLVTLNK True NCI_RA007_Epitope_Rep3 973.58079626017 973.57968993586 43.778 2 -0.15410811483278883 0.0360439897894555 0.9438714419765777 ['nc|ENSG00000102606|Q14155-2|ARHGEF7', 'nc|ENSG00000102606|Q14155-3|ARHGEF7', 'nc|ENSG00000102606|Q14155|ARHGEF7', 'ENSG00000102606|ENST00000646102|ARHGEF7', 'ENST00000491775.5_1_13:111806017-111861644:+|nuORF'] 88058 18306 QVVGGIYGV True PC9_epitope_Rep2 890.4861675993399 890.48506993586 75.741 2 -0.15411461168532725 0.0360439897894555 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 136658 8020 YIDQEELNK True PC9_epitope_Rep3 1150.5506183307 1150.5495299358602 35.825 2 -0.1541385159499992 0.0360439897894555 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'HSP90AB1|p.T285S|1|0.27|ENSG00000096384|chr6:44250495-44250495|A/T|missense_variant', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 5016 23611 ALLDWVTSV True PC9_epitope_Rep1 1002.53859709502 1002.53750993586 95.61 2 -0.15416128506458224 0.03606249040380777 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1-LYPLA1|1|fusion', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 103764 14626 SRFPEALRL True PC9_epitope_Rep2 1087.61382772395 1087.6127299358602 61.526 2 -0.15420337583096017 0.03607891302679051 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 76239 11143 NSATGVPTV True PC9_epitope_Rep5 844.42904664604 844.4284949679301 47.847 1 -0.154210515024425 0.03607891302679051 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3', 'ENST00000469174.1_1_X:73802925-73803237:-|nuORF'] 108777 9166 TEPSNVTTI True NCI_RA007_Epitope_Rep3 960.47639076128 960.47528993586 43.142 2 -0.1542156135574995 0.03607891302679051 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 44512 18032 IPAALPVAA True PC9_epitope_Rep3 821.50108938749 821.49998993586 74.563 2 -0.15422337501231864 0.03607891302679051 0.9438714419765777 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.L269Pfs*11|1|0.15|ENSG00000145715|chr5:87332616-87332620|TTACT/-|frameshift_variant', 'RASA1|p.N407Sfs*3|1|0.22|ENSG00000145715|chr5:87349329-87349332|CAAT/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1', 'RASA1|p.L146Sfs*24|1|0.5|ENSG00000145715|chr5:87268885-87268897|CTTTGGGGGCGGG/-|frameshift_variant'] 83218 12618 QAAHLIQAL True PC9_epitope_Rep2 963.55016483823 963.54906993586 53.845 2 -0.15425900353642608 0.03609325530077713 0.9438714419765777 ['ENSG00000136463|ENST00000258975|TACO1'] 10922 14344 DAVEDLESVGK True PC9_epitope_Rep6 1160.55609763396 1160.5550099358602 67.072 2 -0.1543080157583816 0.03609325530077713 0.9438714419765777 ['ENSG00000161634|ENST00000293371|DCD', 'nc|ENSG00000161634|P81605-2|DCD'] 118153 10944 VAVGVIKAV True PC9_epitope_Rep6 854.5589386167799 854.55784993586 52.973 2 -0.15431242584826455 0.03609325530077713 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 46140 8099 ITAPPGTAA True PC9_epitope_Rep5 797.42831837005 797.4272299358599 36.091 2 -0.15433978868652415 0.03609325530077713 0.9438714419765777 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 52116 7504 KLREVLHELYK True H1975_Epitope_Rep3 1426.82963414662 1426.82797490379 33.845 3 -0.1544255601485708 0.03609325530077713 0.9438714419765777 ['ENSG00000155097|ENST00000518738|ATP6V1C1'] 28492 23664 FSFMAFFFTF True PC9_epitope_Rep3 1290.5783537320197 1290.5772499358602 96.309 2 -0.15444221034385086 0.03609325530077713 0.9438714419765777 ['nc|ENSG00000198794|Q8TAC9-3|SCAMP5', 'ENSG00000198794|ENST00000425597|SCAMP5', 'nc|ENSG00000198794|Q8TAC9-2|SCAMP5'] 58987 16940 LGAEVALGAV True PC9_epitope_Rep5 898.5123823471798 898.51128993586 70.175 2 -0.15445044643109027 0.03609325530077713 0.9438714419765777 ['ENST00000264203.7_1_1:19665365-19665608:-|nuORF'] 41479 15230 IC[Carbamidomethyl]C[Carbamidomethyl]DILDVLDK True H1975_Epitope_Rep1 1362.6523241601196 1362.65122993586 63.847 2 -0.15447820801882617 0.03611175070995472 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF'] 82370 5413 PTTSGPSTPP True H1975_Epitope_Rep2 940.45017601344 940.44906993586 25.849 2 -0.15453379292119448 0.036167926628036376 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 68057 8447 LTNLLGAR True PC9_epitope_Rep4 856.5130510535199 856.51194993586 39.955 2 -0.15456020424720524 0.036167926628036376 0.9438714419765777 ['ENSG00000124279|ENST00000264669|FASTKD3'] 14974 18553 DYSPYFKTI True PC9_epitope_Rep4 1132.5440763982801 1132.5429699358601 79.439 2 -0.15463110963217794 0.03618433674839799 0.9438714419765777 ['ENSG00000186832|ENST00000301653|KRT16', 'CON__P08779', 'CON__Q9Z2K1', 'CON__Q3ZAW8', 'CON__Q6IFX2'] 30351 5813 GAEIENDVP True H1975_Epitope_Rep3 942.4294405688598 942.42834993586 27.382 2 -0.1546583715349199 0.03618433674839799 0.9438714419765777 ['ENSG00000198932|ENST00000537097|GPRASP1'] 31536 13275 GEFGGFGSV True NCI_RA007_Epitope_Rep4 855.3762827971899 855.37518993586 58.197 2 -0.15465860009777171 0.03618433674839799 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 88072 16626 QVVGGIYGV True PC9_epitope_Rep6 890.4861675993399 890.48506993586 76.416 2 -0.15468610045577152 0.03618433674839799 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 140799 11882 YYSHLEGARF True PC9_epitope_Rep5 1241.5829215184897 1241.58182993586 50.703 2 -0.1547437704350459 0.03620282792625137 0.9438714419765777 ['ENSG00000142207|ENST00000382751|URB1'] 135755 8571 YELRAPVA True H1975_Epitope_Rep2 917.4970666362098 917.49596993586 37.921 2 -0.154783182874409 0.036221318394597496 0.9438714419765777 ['ENST00000542939.1_1_12:118576827-118582605:+|nuORF', 'ENSG00000089220|ENST00000261313|PEBP1', 'C12orf51-PEBP1|1|fusion'] 107850 8699 TARKQEII True H1975_Epitope_Rep2 957.5607295219298 957.55962993586 38.422 2 -0.1548137474836358 0.036239112918697004 0.9438714419765777 ['ENST00000466584.5_1_7:44259663-44260543:-|nuORF'] 98088 13098 SHYEEAMGL True PC9_epitope_Rep3 1035.43314605031 1035.43204993586 55.405 2 -0.1548791860607519 0.036239112918697004 0.9438714419765777 ['ENSG00000176953|ENST00000320805|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-3|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-2|NFATC2IP'] 120604 11207 VGAGGPVYL True H1975_Epitope_Rep2 831.4490538146299 831.44850496793 48.148 1 -0.1548957010289196 0.03627469787070785 0.9438714419765777 ['H2AC21|p.A48G|1|0.14|ENSG00000184270|chr1:149887774-149887774|G/C|missense_variant'] 126918 10259 VPVDTGVAA True PC9_epitope_Rep3 827.4388830537498 827.43833496793 44.411 1 -0.1549458823574746 0.03627469787070785 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 1237 7581 AEDLLAPGAPC True NCI_RA007_Epitope_Rep2 1055.49574630687 1055.49464993586 34.115 2 -0.1549547233723938 0.03627469787070785 0.9438714419765777 ['ENSG00000152518|ENST00000282388|ZFP36L2'] 52393 9896 KPGKPRKRKKR True NCI_RA007_Epitope_Rep4 1377.9157042427698 1377.91405490379 44.912 3 -0.15499210804945104 0.03627469787070785 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 62258 14230 LLQESLAQA True PC9_epitope_Rep4 971.52876068731 971.52766993586 62.644 2 -0.1550991474590641 0.03633154936602022 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 78072 15555 PALRGALL True PC9_epitope_Rep1 809.5123227775299 809.51122993586 64.655 2 -0.15519232905111577 0.03634933727197744 0.9438714419765777 ['ENST00000262738.7_1_22:46932303-46932903:-|nuORF'] 91519 5616 RPAAGFVA True PC9_epitope_Rep6 787.4340724568299 787.43296993586 29.678 2 -0.15521053115019098 0.03634933727197744 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 117315 14687 VAAGVLCEL True NCI_RA007_Epitope_Rep3 873.46298962661 873.46188993586 65.16 2 -0.15528209659097655 0.03638560687432868 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF', 'ENSG00000173801|ENST00000393931|JUP'] 98933 16832 SIYLRVHRDEK True PC9_epitope_Rep3 1414.7680965192196 1414.76644490379 69.897 3 -0.155322201467429 0.03638560687432868 0.9438714419765777 ['ENSG00000197779|ENST00000338637|ZNF81'] 79270 9315 PGHLQEGF True PC9_epitope_Rep3 883.41881631551 883.41770993586 40.77 2 -0.15532599280426487 0.03638560687432868 0.9438714419765777 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1'] 92408 5886 RQRRQVEEEIL True NCI_RA007_Epitope_Rep4 1454.7953738962199 1454.7937349037902 29.264 3 -0.15541678988127813 0.03642257086961525 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 30619 5731 GALALEEK True PC9_epitope_Rep6 829.4545331178899 829.45342993586 30.199 2 -0.15546431399252655 0.03642257086961525 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000475726.5_1_22:36680347-36682008:-|nuORF', 'ENST00000486218.1_1_22:36680427-36682008:-|nuORF'] 72511 23212 MVDDVFYIV True PC9_epitope_Rep5 1099.52598380599 1099.52488993586 94.266 2 -0.1555527299557641 0.03643965401507451 0.9438714419765777 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000526700.5_1_16:70530266-70542451:-|nuORF'] 52687 7010 KQGWTPRRMFK True NCI_RA007_Epitope_Rep5 1433.7714080778494 1433.76976490379 33.643 3 -0.1555563920185326 0.03643965401507451 0.9438714419765777 ['ENSG00000159640|ENST00000290866|ACE', 'nc|ENSG00000159640|P12821-2|ACE', 'ENST00000579314.5_1_17:61565977-61574724:+|nuORF', 'ENST00000578839.5_1_17:61562212-61574724:+|nuORF', 'nc|ENSG00000159640|P12821-4|ACE', 'nc|ENSG00000159640|P12821-3|ACE'] 8333 18826 ATLPTTLGV True PC9_epitope_Rep4 871.5014833103099 871.5009349679301 80.501 1 -0.15557213482753457 0.03643965401507451 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 115578 6695 TVIAKVNNV True PC9_epitope_Rep6 956.5654805492 956.56438993586 34.51 2 -0.15562624127229677 0.03645603605331288 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 24341 21620 FADPDDFTL True PC9_epitope_Rep3 1039.4498416602698 1039.4487499358602 88.458 2 -0.1556540846443295 0.03645603605331288 0.9438714419765777 ['ENSG00000180921|ENST00000388913|FAM83H'] 21713 7051 ERYKEVAEL True PC9_epitope_Rep6 1135.5873381925899 1135.58569490379 36.135 3 -0.15569493599586864 0.03645603605331288 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 90313 10817 RIAGIRGIQGV True PC9_epitope_Rep2 1138.69347502698 1138.69183490379 46.926 3 -0.1557231195385288 0.03645603605331288 0.9438714419765777 ['nc|ENSG00000132294|Q14156-3|EFR3A', 'nc|ENSG00000132294|Q14156-2|EFR3A', 'EFR3A|p.L782Wfs*15|1|0.42|ENSG00000132294|chr8:132003268-132003268|A/-|frameshift_variant', 'ENSG00000132294|ENST00000254624|EFR3A'] 54530 16148 LAAHIPLFL True H1975_Epitope_Rep2 993.60113778193 993.6000499358599 67.325 2 -0.15573878522786574 0.03647451386491773 0.9438714419765777 ['nc|ENSG00000144580|Q92600-3|CNOT9', 'ENSG00000144580|ENST00000273064|CNOT9', 'nc|ENSG00000144580|Q92600-2|CNOT9'] 96054 3518 SEAPPTNQA True H1975_Epitope_Rep2 913.41412485789 913.41302993586 18.385 2 -0.15577359774069502 0.03649159140156091 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 123838 17494 VIVPLYDTL True NCI_RA007_Epitope_Rep5 1031.5902983147098 1031.58920993586 74.081 2 -0.15583722236213157 0.03649159140156091 0.9438714419765777 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 9353 15880 AVTGTHTLAL True PC9_epitope_Rep4 982.54474510462 982.54364993586 69.013 2 -0.15584222501642853 0.03649159140156091 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 66083 13348 LSNLTHLELIG True NCI_RA007_Epitope_Rep2 1208.6764875501601 1208.67538993586 56.559 2 -0.15588619710296517 0.03650726694021551 0.9438714419765777 ['ENSG00000197147|ENST00000330947|LRRC8B'] 63447 15543 LPGVAGAVG True PC9_epitope_Rep5 739.42283906679 739.42229496793 64.796 1 -0.15589633809096817 0.03650726694021551 0.9438714419765777 ['ENSG00000164692|ENST00000297268|COL1A2'] 23926 10470 EYNNNFHVL True NCI_RA007_Epitope_Rep5 1148.5250722892001 1148.5239699358601 46.904 2 -0.15589843884419577 0.03650726694021551 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 39724 8957 HPVLMSEA True PC9_epitope_Rep1 882.4269384710601 882.42584993586 39.296 2 -0.15591354930674667 0.03650726694021551 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 112611 7841 TPDAPGSPEA True H1975_Epitope_Rep3 940.4137905047199 940.41268993586 35.137 2 -0.15594000673675562 0.03650726694021551 0.9438714419765777 ['ENST00000420190.6_3_1:859345-859660:+|nuORF'] 69307 14697 LVPPDQPEV True PC9_epitope_Rep1 992.51786165044 992.51676993586 61.352 2 -0.15598811143705252 0.036524339973541424 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 131618 18254 VVYQDGFYGA True PC9_epitope_Rep3 1117.50802524273 1117.5069299358602 75.424 2 -0.15599311670490398 0.036524339973541424 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 112838 17515 TPMPPISSV True PC9_epitope_Rep2 927.47355431031 927.47244993586 72.631 2 -0.15600891953477042 0.036524339973541424 0.9438714419765777 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 72746 11290 NAAPGVDL True PC9_epitope_Rep6 755.38136817763 755.38026993586 54.442 2 -0.15607647073920186 0.03654141104294478 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1', 'ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8', 'CON__Q148H6', 'ENSG00000173908|ENST00000306658|KRT28', 'CON__Q7Z3Y7'] 81770 2768 PSDPRYHEVHY True H1975_Epitope_Rep3 1398.63166261606 1398.63001490379 14.733 3 -0.15611944818228027 0.03654141104294478 0.9438714419765777 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5'] 124378 16537 VLEAEQNSL True PC9_epitope_Rep3 1001.50293986229 1001.50184993586 68.749 2 -0.1561610780605442 0.03654141104294478 0.9438714419765777 ['ENST00000465425.1_1_19:36497111-36499583:-|nuORF', 'ENSG00000181392|ENST00000324444|SYNE4'] 100365 16870 SLNIITVTL True PC9_epitope_Rep1 972.58554728744 972.58444993586 69.715 2 -0.1562199753574178 0.0365598819041046 0.9438714419765777 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000572285.5_1_17:7132676-7132733:-|nuORF', 'nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 31782 18945 GELPSWIL True H1975_Epitope_Rep2 913.49091862661 913.49037496793 78.642 1 -0.15625146539623566 0.036571340949168134 0.9438714419765777 ['nc|ENSG00000241468|P56134-2|ATP5MF', 'ENSG00000241468|ENST00000292475|ATP5MF', 'ENST00000491560.1_1_7:99055952-99057898:-|nuORF', 'ENST00000481899.1_1_7:99056719-99057898:-|nuORF', 'nc|ENSG00000241468|P56134-4|ATP5MF', 'ENST00000485011.1_1_7:99057682-99063764:-|nuORF', 'nc|ENSG00000241468|P56134-3|ATP5MF', 'ENST00000524321.1_1_7:99057682-99063764:-|nuORF'] 65409 13180 LSESQLVHGP True PC9_epitope_Rep1 1065.5454733806098 1065.54436993586 55.56 2 -0.15626576167224618 0.036571340949168134 0.9438714419765777 ['ENST00000606150.5_1_6:13281194-13295113:-|nuORF'] 44546 13213 IPATPGIGA True PC9_epitope_Rep2 795.4490538146299 795.44850496793 56.102 1 -0.1562884169266543 0.036571340949168134 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 2267 6918 AEPGALASA True H1975_Epitope_Rep2 785.39193286133 785.3913849679301 31.531 1 -0.15632298608577333 0.036571340949168134 0.9438714419765777 ['ENST00000304771.7_1_11:75378785-75379403:-|nuORF'] 33172 11294 GKTTISFAL True NCI_RA007_Epitope_Rep3 936.5280324113199 936.52692993586 51.535 2 -0.15633104520146035 0.036571340949168134 0.9438714419765777 ['nc|ENSG00000198682|O95340|PAPSS2', 'ENSG00000198682|ENST00000456849|PAPSS2'] 75177 7020 NNLSASKVL True NCI_RA007_Epitope_Rep4 944.52909504048 944.52798993586 33.63 2 -0.15636550103006486 0.036571340949168134 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 110470 5403 TIPGSPREKR True NCI_RA007_Epitope_Rep5 1139.64110510095 1139.63944490379 27.471 3 -0.15637251984144043 0.036571340949168134 0.9438714419765777 ['nc|ENSG00000188779|P84550-2|SKOR1'] 91391 5537 RNAGDEVTI True PC9_epitope_Rep4 973.48287312405 973.48176993586 28.061 2 -0.15637484309379437 0.036571340949168134 0.9438714419765777 ['SNTG2|p.V152F|1|0.22|ENSG00000172554|chr2:1165590-1165590|G/T|missense_variant', 'SNTG2|p.W268Cfs*12|2|0.89|ENSG00000172554|chr2:1237971-1237971|G/-|frameshift_variant', 'ENSG00000172554|ENST00000308624|SNTG2'] 135719 17069 YEIYSDFAL True PC9_epitope_Rep6 1119.5124419168299 1119.5113499358602 78.22 2 -0.15637982610348233 0.036571340949168134 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'nc|ENSG00000196655|Q9Y296-2|TRAPPC4'] 1070 11083 AEALPSLAA True NCI_RA007_Epitope_Rep3 841.4545331178899 841.45342993586 50.694 2 -0.1564059665417656 0.036571340949168134 0.9438714419765777 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA'] 13579 8433 DPPSNPVAA True PC9_epitope_Rep4 866.4133965819 866.41228993586 39.902 2 -0.15646005523657483 0.036571340949168134 0.9438714419765777 ['ENSG00000056277|ENST00000370978|ZNF280C'] 95855 13638 SDLPSDFSI True NCI_RA007_Epitope_Rep3 979.4498416602701 979.44874993586 60.948 2 -0.15648400272281435 0.036588404408241494 0.9438714419765777 ['BRD7|p.Y457Hfs*4|1|0.1|ENSG00000166164|chr16:50323658-50323662|CATAC/-|frameshift_variant', 'ENSG00000166164|ENST00000394688|BRD7', 'nc|ENSG00000166164|Q9NPI1-2|BRD7'] 44915 7246 IQDSRTLP True PC9_epitope_Rep1 928.4977949122 928.49668993586 32.686 2 -0.15649925193360298 0.036588404408241494 0.9438714419765777 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 77881 14278 PAGSFLLT True NCI_RA007_Epitope_Rep5 804.43815477776 804.43760496793 61.614 1 -0.15649994008690607 0.036588404408241494 0.9438714419765777 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 52835 17954 KQVEEIFNLKF True PC9_epitope_Rep6 1393.7605515272896 1393.7594499358602 81.689 2 -0.15659503021840077 0.03662603495860166 0.9438714419765777 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 135241 13535 YAYDGKDYLA True PC9_epitope_Rep5 1177.5291546101298 1177.52804993586 57.084 2 -0.15662613695798433 0.036643796235961514 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 112578 9195 TPAPHSPWTA True PC9_epitope_Rep6 1063.50869394907 1063.50758993586 45.502 2 -0.15665384700239549 0.036643796235961514 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 36558 14418 GVLDKLRSV True PC9_epitope_Rep2 985.59202965021 985.59092993586 60.727 2 -0.15672636077732413 0.03665944847938984 0.9438714419765777 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14'] 104633 7487 SSVVTVPS True NCI_RA007_Epitope_Rep3 774.41233395274 774.4117849679301 36.573 1 -0.1567324107850453 0.03665944847938984 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 91511 6319 RPAAGFVA True PC9_epitope_Rep2 787.4340724568299 787.43296993586 29.703 2 -0.15673496038668636 0.03665944847938984 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 94984 12089 RYQDAIRVF True PC9_epitope_Rep6 1166.6196413803798 1166.61799490379 57.827 3 -0.1567549248988713 0.03665944847938984 0.9438714419765777 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 9205 21289 AVPGPGGIWSV True PC9_epitope_Rep3 1038.5498304850598 1038.5487299358601 87.183 2 -0.156777510002518 0.03665944847938984 0.9438714419765777 ['ENSG00000185085|ENST00000330574|INTS5'] 57507 17348 LEKPCFAQEL True PC9_epitope_Rep4 1176.5848956644397 1176.58378993586 74.733 2 -0.15680616385632754 0.03667580048671125 0.9438714419765777 ['ENST00000273146.6_1_3:43020947-43074030:+|nuORF', 'ENST00000418093.2_1_3:42980387-43074030:+|nuORF'] 64268 19573 LQLGNLLSL True PC9_epitope_Rep6 969.58588164061 969.58478993586 87.951 2 -0.1568182789555923 0.03667580048671125 0.9438714419765777 ['ENST00000509462.5_1_5:68661579-68665127:-|nuORF'] 78860 7389 PESGGVMAT True H1975_Epitope_Rep2 847.37456854503 847.37346993586 33.363 2 -0.15683631210583576 0.03667580048671125 0.9438714419765777 ['ENSG00000167394|ENST00000300849|ZNF668', 'nc|ENSG00000167394|Q96K58-2|ZNF668'] 81892 22478 PSLLFGSEIF True PC9_epitope_Rep1 1108.580461907 1108.57936993586 91.264 2 -0.15684697066385453 0.03667580048671125 0.9438714419765777 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'PRR14L|p.P1996Qfs*42|1|0.37|ENSG00000183530|chr22:31703563-31703563|G/-|frameshift_variant', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L'] 21395 12664 ERMPEQIRL True PC9_epitope_Rep3 1170.61792712822 1170.61682993586 53.736 2 -0.15693798908045095 0.03669425921667816 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 138331 15374 YRAPEVLL True PC9_epitope_Rep4 959.5440168286299 959.54346496793 67.069 1 -0.15701049146414456 0.03671271723926498 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 45293 10936 ISAHKPLLIS True NCI_RA007_Epitope_Rep1 1077.65462990677 1077.6535299358602 46.531 2 -0.15705559534156885 0.03673117455451236 0.9438714419765777 ['ENSG00000008853|ENST00000251822|RHOBTB2', 'nc|ENSG00000008853|Q9BYZ6-3|RHOBTB2', 'nc|ENSG00000008853|Q9BYZ6-2|RHOBTB2'] 33236 8401 GLAEVAAAV True H1975_Epitope_Rep2 799.4439684341899 799.44286993586 37.267 2 -0.15713521210305872 0.03678795194573777 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 34425 11715 GPWSRSLSA True PC9_epitope_Rep5 959.4824792012299 959.48138993586 50.06 2 -0.1572096333619826 0.03680570191404978 0.9438714419765777 ['ENSG00000039068|ENST00000261769|CDH1', 'nc|ENSG00000039068|P12830-2|CDH1'] 8455 12760 ATSRTTLVL True PC9_epitope_Rep3 960.5603951687599 960.55928993586 54.101 2 -0.15723927929964637 0.03680570191404978 0.9438714419765777 ['ENST00000254719.9_1_17:1787200-1792065:+|nuORF'] 113540 10037 TQVEASEESAL True PC9_epitope_Rep6 1162.5353621893798 1162.53426993586 49.183 2 -0.15733898230435972 0.03682062874767716 0.9438714419765777 ['ENSG00000179010|ENST00000382581|MRFAP1', 'ENSG00000178988|ENST00000320848|MRFAP1L1'] 77695 9447 PAAATVAVA True PC9_epitope_Rep4 769.4334037504899 769.4328549679301 43.948 1 -0.15736170525535073 0.03682062874767716 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 34694 17783 GQLSDLVVV True PC9_epitope_Rep4 928.52294703088 928.52239496793 76.431 1 -0.15737438325487269 0.03682062874767716 0.9438714419765777 ['ENST00000511288.1_1_17:48545715-48548505:+|nuORF', 'ENST00000506085.5_1_17:48545715-48551043:+|nuORF'] 33247 8136 GLAEVAAAV True NCI_RA007_Epitope_Rep5 799.4439684341899 799.44341496793 37.978 1 -0.1574070892761216 0.03682062874767716 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 74275 24719 NIIEAINELLV True PC9_epitope_Rep1 1239.70745332527 1239.70634993586 99.968 2 -0.1574179259036099 0.03682062874767716 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000555522.1_1_14:75469672-75471687:+|nuORF'] 41636 4158 IDIDEDRETEK True NCI_RA007_Epitope_Rep4 1361.63105347937 1361.6293949037902 22.286 3 -0.15745061224574616 0.03682062874767716 0.9438714419765777 ['RASA2|p.R760K|1|0.21|ENSG00000155903|chr3:141609473-141609473|G/A|missense_variant'] 108409 13385 TEEDPSLPAL True H1975_Epitope_Rep2 1070.5131701928199 1070.5120699358602 56.619 2 -0.15752299274062395 0.036877394636015325 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A'] 91959 4914 RPPPPPPPP True PC9_epitope_Rep2 950.5337864980999 950.53268993586 24.267 2 -0.15756753020168077 0.036895844907185685 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 118638 5033 VEAPPPSSP True H1975_Epitope_Rep2 879.43379767331 879.43324496793 24.439 1 -0.1576574616163673 0.036931328416818315 0.9438714419765777 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 63472 12581 LPHGFTNMA True PC9_epitope_Rep2 986.4643866089401 986.46328993586 53.699 2 -0.15766068890815346 0.036931328416818315 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 135898 9560 YESSTASALVA True NCI_RA007_Epitope_Rep2 1097.52406922969 1097.52347496793 41.8 1 -0.157679824960919 0.036931328416818315 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 110034 9369 THVGPTPAI True PC9_epitope_Rep3 891.48141657207 891.48030993586 40.978 2 -0.15768215932483426 0.036931328416818315 0.9438714419765777 ['ENSG00000157259|ENST00000287957|GATAD1'] 110285 15135 TIGLIHAV True PC9_epitope_Rep5 822.4963383602201 822.49524993586 63.222 2 -0.1577584414956809 0.03696397448911191 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 89467 4849 REQERAYIV True H1975_Epitope_Rep2 1162.6094706195 1162.60783490379 23.739 3 -0.15779718767470652 0.03696397448911191 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1', 'ENST00000482693.1_1_11:64540804-64545891:-|nuORF'] 106958 19981 SYLDSIHFF True PC9_epitope_Rep6 1127.52876068731 1127.52766993586 89.521 2 -0.15782013705900483 0.03696397448911191 0.9438714419765777 ['CREBBP|p.V1449Ffs*10|2|0.28|ENSG00000005339|chr16:3738609-3738609|G/-|frameshift_variant', 'CREBBP|p.F1633Dfs*25|1|0.43|ENSG00000005339|chr16:3731464-3731468|CGAAG/-|frameshift_variant', 'nc|ENSG00000005339|Q92793-2|CREBBP', 'ENSG00000005339|ENST00000262367|CREBBP'] 44634 20301 IPIQDVAI True PC9_epitope_Rep6 867.5065686907499 867.50546993586 90.794 2 -0.15783561554830083 0.03696397448911191 0.9438714419765777 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3', 'nc|ENSG00000184347|O75094-2|SLIT3', 'SLIT3|p.Q1102Rfs*119|1|0.53|ENSG00000184347|chr5:168686989-168686989|G/-|frameshift_variant', 'ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2'] 135487 6020 YEDGGKPPVP True H1975_Epitope_Rep2 1057.50802524273 1057.5069299358602 28.134 2 -0.15783817859562255 0.03696397448911191 0.9438714419765777 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 2407 5400 AEQLEPRVS True H1975_Epitope_Rep2 1027.52982331647 1027.5287299358602 25.804 2 -0.1578818830745902 0.03696397448911191 0.9438714419765777 ['ENSG00000134748|ENST00000257181|PRPF38A'] 101756 6187 SPHPGLVAA True PC9_epitope_Rep2 847.4552018242299 847.45410993586 29.188 2 -0.15789302999431262 0.03696397448911191 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300'] 36821 19422 GVPQALFGV True PC9_epitope_Rep6 886.4912529797799 886.49070496793 87.366 1 -0.15790247263004517 0.03696397448911191 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 100676 10553 SLQWRHRWDTP True PC9_epitope_Rep1 1480.7323797168397 1480.73074490379 45.482 3 -0.15793657409986772 0.03698241850844601 0.9438714419765777 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 111697 17800 TLPPSALAP True PC9_epitope_Rep5 865.49091862661 865.48982993586 73.487 2 -0.15798741787240853 0.03700015320974414 0.9438714419765777 ['ENST00000483551.6_1_15:69082366-69082516:-|nuORF'] 11614 12119 DHARTITVAL True PC9_epitope_Rep1 1095.60365696307 1095.60254993586 51.478 2 -0.1579892419093788 0.03700015320974414 0.9438714419765777 ['ENSG00000090861|ENST00000261772|AARS1', 'nc|ENSG00000090861|P49588-2|AARS1', 'AARS1|p.H490Ifs*17|1|0.21|ENSG00000090861|chr16:70264982-70264982|G/-|frameshift_variant'] 83533 17053 QDLLVASL True PC9_epitope_Rep6 857.48583324617 857.48472993586 78.159 2 -0.15810617336774996 0.037049801826641394 0.9438714419765777 ['ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR', 'ENST00000577161.5_1_17:78519375-78883449:+|nuORF', 'RPTOR-STXBP4|1|fusion', 'ENST00000574767.5_1_17:78681670-78831736:+|nuORF', 'RPTOR-STXBP4|2|fusion', 'nc|ENSG00000141564|Q8N122-2|RPTOR'] 43461 4550 IHSSSTVL True PC9_epitope_Rep6 842.44978209062 842.44868993586 24.757 2 -0.15811804236000432 0.037049801826641394 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 78823 4938 PEPNHVTEASE True H1975_Epitope_Rep3 1208.5309455152799 1208.52984993586 24.122 2 -0.15813624775701865 0.037049801826641394 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000587504.5_1_17:73835995-73839803:-|nuORF', 'nc|ENSG00000092929|Q70J99-2|UNC13D', 'ENST00000591563.5_1_17:73836050-73840487:-|nuORF', 'ENST00000585574.5_1_17:73837076-73839803:-|nuORF'] 29595 22104 FVLDEADEML True PC9_epitope_Rep2 1180.53219138524 1180.53108993586 90.496 2 -0.15816287531249323 0.037049801826641394 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000465792.1_1_3:186503888-186504086:+|nuORF', 'ENST00000448133.1_1_13:61211649-61211793:-|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000578324.5_1_17:7477602-7481249:+|nuORF', 'nc|ENSG00000161960|P60842-2|EIF4A1', 'ENST00000581621.1_1_17:7476159-7481249:+|nuORF', 'ENST00000581544.5_1_17:7477924-7481249:+|nuORF', 'ENST00000577731.1_1_17:7478540-7480862:+|nuORF'] 113178 20845 TQDGPVAFL True PC9_epitope_Rep2 946.4759968384599 946.47544496793 85.626 1 -0.1581822545289061 0.037049801826641394 0.9438714419765777 ['ENST00000609682.1_1_3:101395365-101395752:+|nuORF'] 125972 8620 VPAGGAVAV True PC9_epitope_Rep6 739.42283906679 739.42229496793 42.974 1 -0.15818950002290902 0.037049801826641394 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 63064 7899 LNLAVSGR True PC9_epitope_Rep4 828.48175092524 828.48064993586 37.812 2 -0.158277283284601 0.037049801826641394 0.9438714419765777 ['ENST00000596643.5_1_19:17622170-17622251:-|nuORF'] 78862 16889 PESIAASIS True PC9_epitope_Rep5 873.44436235701 873.44381496793 69.976 1 -0.15834654403519846 0.037049801826641394 0.9438714419765777 ['ENST00000481424.5_1_7:99227639-99227963:+|nuORF'] 24193 21645 EYTSILHLF True PC9_epitope_Rep2 1121.57571087973 1121.57460993586 88.732 2 -0.15835792176900473 0.037049801826641394 0.9438714419765777 ['LRIG2|p.S985Pfs*4|1|0.18|ENSG00000198799|chr1:113119502-113119502|C/-|frameshift_variant', 'ENSG00000198799|ENST00000361127|LRIG2'] 68049 11183 LTNIPGNRVA True NCI_RA007_Epitope_Rep2 1053.59309227937 1053.59198993586 48.082 2 -0.1583632983769718 0.037049801826641394 0.9438714419765777 ['ENSG00000204316|ENST00000309352|MRPL38', 'nc|ENSG00000204316|Q96DV4-2|MRPL38'] 140493 20322 YYIFIPSKF True PC9_epitope_Rep4 1176.6219327961599 1176.62029490379 86.311 3 -0.15836771899185834 0.037049801826641394 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 140841 19996 YYTDIMHTL True PC9_epitope_Rep5 1155.5270464351497 1155.52647496793 81.968 1 -0.15842769842258536 0.03706823925863521 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF'] 55600 12522 LCPMNFVPVP True H1975_Epitope_Rep2 1115.5507590851898 1115.54966993586 53.259 2 -0.15847120481600666 0.03708596591996936 0.9438714419765777 ['ENST00000478275.1_1_1:212860135-212870482:-|nuORF', 'ENSG00000123685|ENST00000243440|BATF3'] 14562 11880 DVEGQDVVE True PC9_epitope_Rep3 988.4349198721198 988.43382993586 50.713 2 -0.15847968468404602 0.03708596591996936 0.9438714419765777 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000557589.1_1_12:56815505-56817595:-|nuORF', 'ENST00000555808.1_1_12:56815681-56815917:-|nuORF'] 33796 6692 GLTAHVVSA True PC9_epitope_Rep5 853.46576650793 853.46466993586 30.713 2 -0.15849756701886894 0.037102980874160016 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6'] 19273 18933 ELLLVVLSHV True PC9_epitope_Rep2 1120.6855956818802 1120.68448993586 78.19 2 -0.15851044269807651 0.037102980874160016 0.9438714419765777 ['ENSG00000161243|ENST00000292853|FBXO27'] 73173 7237 NEDYTMSSP True H1975_Epitope_Rep3 1042.3913408079802 1042.39024993586 32.81 2 -0.15851090183598973 0.037102980874160016 0.9438714419765777 ['nc|ENSG00000083642|Q9NTI5-2|PDS5B', 'PDS5B|p.K1318Nfs*76|1|0.74|ENSG00000083642|chr13:32770442-32770442|A/-|frameshift_variant', 'ENSG00000083642|ENST00000315596|PDS5B'] 8889 13881 AVGDLAAV True NCI_RA007_Epitope_Rep2 714.39120458534 714.39065496793 58.646 1 -0.15870511162378712 0.03717884902553892 0.9438714419765777 ['ENSG00000162460|ENST00000375782|TMEM82'] 68692 14089 LVDDNYFY True H1975_Epitope_Rep3 1047.45492704071 1047.45382993586 59.52 2 -0.15877126903773087 0.03719656941572862 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 19361 7503 ELNITAAK True PC9_epitope_Rep3 858.4810822188999 858.47998993586 33.863 2 -0.15877328875021993 0.03719656941572862 0.9438714419765777 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF', 'ENST00000479123.1_1_2:3623223-3624265:+|nuORF'] 101301 11338 SLYERLAV True PC9_epitope_Rep1 949.5232813840498 949.52218993586 48.491 2 -0.15881910322476583 0.03721357606386033 0.9438714419765777 ['PHC1|p.Q35L|1|0.38|ENSG00000111752|chr12:8917781-8917781|A/T|missense_variant'] 117468 7154 VAEAEATVLG True H1975_Epitope_Rep3 958.4971262058599 958.4965749679301 32.49 1 -0.15884526893225437 0.03721357606386033 0.9438714419765777 ['ENSG00000143375|ENST00000271636|CGN'] 66740 20989 LSTRLTLLL True PC9_epitope_Rep4 1028.65938093404 1028.65828993586 88.895 2 -0.15886731781930027 0.03721357606386033 0.9438714419765777 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 69497 4715 LVSFRKYMAK True NCI_RA007_Epitope_Rep1 1241.69544917293 1241.69380490379 22.422 3 -0.15886863393356007 0.037230580758776465 0.9438714419765777 ['PEG3|p.K503Nfs*76|1|0.21|ENSG00000198300|chr19:56816936-56816936|C/-|frameshift_variant'] 88819 5735 RDSVFLRFRTR True NCI_RA007_Epitope_Rep1 1451.8109643907096 1451.80930490379 26.365 3 -0.1588720685435822 0.037230580758776465 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135282676-135283553:+|nuORF'] 108515 12005 TEFPGVVA True H1975_Epitope_Rep3 818.4174193331799 818.4168749679301 51.338 1 -0.15890888952599275 0.037230580758776465 0.9438714419765777 ['nc|ENSG00000198791|Q9UIV1-2|CNOT7', 'ENSG00000198791|ENST00000361272|CNOT7'] 46264 16255 ITDVIIGFQ True NCI_RA007_Epitope_Rep1 1004.5542471591598 1004.55314993586 67.338 2 -0.1589307397375865 0.03724900943667094 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 69 12986 AAAGSPVFL True H1975_Epitope_Rep3 831.44905381463 831.44794993586 55.184 2 -0.15899397265292475 0.03727944272208826 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 22924 13539 EVGETLLY True H1975_Epitope_Rep1 922.46476344842 922.46421496793 57.199 1 -0.15900516600493692 0.03727944272208826 0.9438714419765777 ['ENSG00000127948|ENST00000461988|POR'] 16949 19944 EGFLQASL True PC9_epitope_Rep5 863.4388830537499 863.43778993586 81.77 2 -0.15901446204914876 0.03727944272208826 0.9438714419765777 ['nc|ENSG00000102606|Q14155-2|ARHGEF7', 'nc|ENSG00000102606|Q14155-3|ARHGEF7', 'nc|ENSG00000102606|Q14155|ARHGEF7', 'ENSG00000102606|ENST00000646102|ARHGEF7', 'ENST00000422836.2_1_13:111767873-111768762:+|nuORF', 'nc|ENSG00000102606|Q14155-5|ARHGEF7'] 74162 6706 NHYQKQLEI True PC9_epitope_Rep2 1171.5985715826298 1171.59746993586 31.203 2 -0.15905467478113122 0.03727944272208826 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 70869 2743 MEGPPRPQA True H1975_Epitope_Rep2 981.47020026537 981.46910993586 14.593 2 -0.15910241280320178 0.03727944272208826 0.9438714419765777 ['ENST00000380502.7_2_9:19102712-19102766:-|nuORF'] 88453 14881 QYVDFHNQL True PC9_epitope_Rep2 1162.54072235334 1162.5396299358601 62.503 2 -0.15912520722121587 0.03727944272208826 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5', 'nc|ENSG00000134899|P28715-2|ERCC5'] 77496 11004 NYPSAFHSV True PC9_epitope_Rep2 1020.46649478392 1020.46538993586 47.648 2 -0.15922776945907638 0.03727944272208826 0.9438714419765777 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 58768 7395 LFMFRRLRQFR True NCI_RA007_Epitope_Rep5 1568.8874408895997 1568.88580490379 35.122 3 -0.15922783106188937 0.03727944272208826 0.9438714419765777 ['nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 45653 9495 ISIMEPDVP True H1975_Epitope_Rep1 999.4946836777099 999.49358993586 41.443 2 -0.15924010351834733 0.03727944272208826 0.9438714419765777 ['ENSG00000129925|ENST00000431232|PGAP6'] 116410 5485 TWKSNDTAASE True NCI_RA007_Epitope_Rep1 1208.5309455152799 1208.52984993586 25.407 2 -0.15926017246063365 0.03727944272208826 0.9438714419765777 ['nc|ENSG00000149177|Q12913-3|PTPRJ', 'ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 54142 16245 KYNANFVTF True PC9_epitope_Rep4 1102.54474510462 1102.5441749679298 70.428 1 -0.15929288810303807 0.03727944272208826 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000527157.1_1_11:66888787-66947744:+|nuORF', 'KDM2A-C11orf80|3|fusion'] 60050 6915 LHSEVLSP True H1975_Epitope_Rep2 880.46543215476 880.46432993586 31.519 2 -0.15931824334955486 0.03729429774205894 0.9438714419765777 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant', 'REV3L|p.M1011Nfs*5|1|0.26|ENSG00000009413|chr6:111375323-111375324|-/T|frameshift_variant'] 120752 8763 VGAVSELRCK True NCI_RA007_Epitope_Rep2 1060.56991430664 1060.5688099358601 38.732 2 -0.159412161753676 0.03729429774205894 0.9438714419765777 ['ENSG00000161996|ENST00000293879|WDR90', 'ENST00000546516.5_1_16:705169-713132:+|nuORF', 'ENST00000552728.5_1_16:708591-715679:+|nuORF', 'ENST00000552683.5_1_16:707859-713132:+|nuORF', 'ENST00000547407.5_1_16:711076-715728:+|nuORF', 'ENST00000549024.5_1_16:711101-717586:+|nuORF', 'ENST00000548603.1_1_16:712278-713180:+|nuORF'] 55458 10055 LATVTVRP True PC9_epitope_Rep5 855.5178020807899 855.51670993586 43.656 2 -0.15946462822416863 0.03729429774205894 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 106421 18328 SVTNSLIAV True PC9_epitope_Rep4 902.5072969667399 902.50618993586 78.567 2 -0.15948882632841044 0.03729429774205894 0.9438714419765777 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR', 'nc|ENSG00000164327|Q6R327-4|RICTOR', 'ENST00000513566.1_1_5:38981926-39074494:-|nuORF', 'ENST00000510711.5_1_5:38971963-39074479:-|nuORF', 'RICTOR|p.L431Yfs*22|1|0.25|ENSG00000164327|chr5:38966648-38966648|A/-|frameshift_variant'] 34650 16722 GQISEVVVV True PC9_epitope_Rep6 928.5229470308799 928.52239496793 76.801 1 -0.15949386377518965 0.03729429774205894 0.9438714419765777 ['nc|ENSG00000099622|Q14011|CIRBP', 'nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP'] 7785 12659 ASVPSPASI True PC9_epitope_Rep5 827.43888305375 827.43778993586 53.697 2 -0.15958466766468887 0.03729429774205894 0.9438714419765777 ['ENST00000529958.1_1_11:6704370-6704496:-|nuORF'] 128706 16899 VSPASFENV True PC9_epitope_Rep5 948.45526139388 948.45471496793 70.015 1 -0.15961763187144432 0.03731271885344712 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 124416 16158 VLEHLNAIV True PC9_epitope_Rep6 1006.58113061334 1006.58002993586 74.504 2 -0.1596638585193924 0.03733042496603716 0.9438714419765777 ['ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.V747Gfs*14|1|0.2|ENSG00000121871|chr3:165188591-165188592|-/C|frameshift_variant'] 24016 23841 EYPFILDAF True PC9_epitope_Rep2 1113.5382627418498 1113.53767496793 97.175 1 -0.15971567504922568 0.03733042496603716 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 92062 5456 RPRVTEPISA True PC9_epitope_Rep4 1124.6302060640799 1124.62855490379 27.725 3 -0.15976216256053455 0.037348844328792284 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 56301 14991 LDQTLLDLNEM-[Oxidation] True NCI_RA007_Epitope_Rep2 1319.6278830556698 1319.6267899358602 62.993 2 -0.15988909612235588 0.0373856809398079 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 118170 9894 VAVSGKGF True PC9_epitope_Rep1 763.4228390667898 763.42174993586 42.916 2 -0.1599113610618554 0.0373856809398079 0.9438714419765777 ['nc|ENSG00000165409|P16473-3|TSHR'] 43970 11854 ILGEAELQ True H1975_Epitope_Rep2 871.46509780159 871.46454496793 50.674 1 -0.15994538702226285 0.037403382566771254 0.9438714419765777 ['nc|ENSG00000137601|Q96PY6-4|NEK1', 'nc|ENSG00000137601|Q96PY6-2|NEK1', 'nc|ENSG00000137601|Q96PY6-6|NEK1', 'nc|ENSG00000137601|Q96PY6|NEK1', 'ENSG00000137601|ENST00000507142|NEK1'] 36454 19613 GVIQDFINA True PC9_epitope_Rep6 975.5025459394699 975.50144993586 88.102 2 -0.15996541975823972 0.037403382566771254 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 1363 10500 AEEEAPWAA True H1975_Epitope_Rep3 972.4188758851598 972.4183249679301 45.451 1 -0.16000782826004029 0.037421798771738506 0.9438714419765777 ['ENSG00000100294|ENST00000290429|MCAT', 'MCAT|p.A94Cfs*9|1|0.33|ENSG00000100294|chr22:43143061-43143070|GCGGCGGGCG/-|frameshift_variant', 'nc|ENSG00000100294|Q8IVS2-2|MCAT'] 54126 6157 KYMYQPMT True NCI_RA007_Epitope_Rep3 1060.4721744113199 1060.4710699358602 31.219 2 -0.1600119053600867 0.03743376881730714 0.9438714419765777 ['ENSG00000187068|ENST00000335012|C3orf70'] 139159 15066 YSSEIWDLY True H1975_Epitope_Rep1 1174.51825557326 1174.51714993586 63.203 2 -0.16002608279067235 0.03743376881730714 0.9438714419765777 ['ENST00000345122.7_1_14:32559748-32559826:+|nuORF'] 111463 21676 TLLEQQGLI True PC9_epitope_Rep1 1013.57571087973 1013.5746099358599 88.207 2 -0.16002753108060702 0.03743376881730714 0.9438714419765777 ['ENSG00000100889|ENST00000216780|PCK2', 'ENST00000558674.5_1_14:24566116-24567637:+|nuORF', 'ENST00000561050.5_1_14:24566116-24568822:+|nuORF', 'nc|ENSG00000100889|Q16822-2|PCK2'] 56974 10665 LEEANNDLENK True NCI_RA007_Epitope_Rep2 1287.5942740478297 1287.59316993586 46.083 2 -0.16006008131331462 0.03743376881730714 0.9438714419765777 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 101754 5983 SPHPGLVAA True PC9_epitope_Rep2 847.4552018242299 847.45410993586 28.401 2 -0.16008770511143094 0.03743376881730714 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300'] 7605 14756 ASILTESVL True H1975_Epitope_Rep3 931.52261267771 931.5220649679301 62.137 1 -0.16009172675294633 0.03743376881730714 0.9438714419765777 ['nc|ENSG00000197226|Q66K14|TBC1D9B', 'ENSG00000197226|ENST00000355235|TBC1D9B', 'ENST00000520794.1_1_5:179290450-179293075:-|nuORF'] 84960 7488 QIC[Carbamidomethyl]MDGALDP True H1975_Epitope_Rep2 1118.4736312427299 1118.4725299358602 33.752 2 -0.1601215049788134 0.03743376881730714 0.9438714419765777 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'ENST00000374161.7_3_10:50011336-50031259:+|nuORF'] 52772 4963 KQQAPPPPP True NCI_RA007_Epitope_Rep5 958.5236157372198 958.52250993586 25.791 2 -0.16014673689983513 0.03743376881730714 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant'] 120912 20941 VGEEFQIVL True PC9_epitope_Rep4 1032.5491617787197 1032.5480699358602 88.709 2 -0.1601514509431971 0.03743376881730714 0.9438714419765777 ['ANTXR2|p.A359Cfs*13|1|0.21|ENSG00000163297|chr4:79984831-79984832|-/G|frameshift_variant', 'ENSG00000163297|ENST00000403729|ANTXR2', 'nc|ENSG00000163297|P58335|ANTXR2', 'nc|ENSG00000163297|P58335-3|ANTXR2'] 24242 15625 EYYDKHFTEF True PC9_epitope_Rep3 1377.5877321154096 1377.5860949037901 65.249 3 -0.1601956430330926 0.03743376881730714 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 131596 10034 VVWQRRHAR True PC9_epitope_Rep3 1206.68464167878 1206.6829949037901 43.552 3 -0.16022569210628607 0.03745146420305656 0.9438714419765777 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 117227 18621 TYVFNIIF True NCI_RA007_Epitope_Rep3 1015.5378688190299 1015.53676993586 81.479 2 -0.1602615111746644 0.03745146420305656 0.9438714419765777 ['ENSG00000121743|ENST00000241125|GJA3'] 1516 9762 AEEPWGEEA True H1975_Epitope_Rep1 1016.4087051242799 1016.40760993586 42.479 2 -0.16027684017810234 0.037489001950958264 0.9438714419765777 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 83286 20196 QAFVLARYL True PC9_epitope_Rep1 1079.61276509479 1079.6116699358602 82.513 2 -0.16029375365987883 0.037506694208553286 0.9438714419765777 ['ENST00000475890.5_1_12:53552117-53555118:-|nuORF', 'nc|ENSG00000139631|Q9Y600-2|CSAD', 'ENSG00000139631|ENST00000444623|CSAD', 'nc|ENSG00000139631|Q9Y600-3|CSAD'] 41348 17923 IALSSYSSF True PC9_epitope_Rep2 973.4756624852901 973.47456993586 74.247 2 -0.16030747483348431 0.037506694208553286 0.9438714419765777 ['ENST00000390658.3_2_19:40030720-40030798:-|nuORF'] 114957 14210 TTIEAIHGL True PC9_epitope_Rep2 953.51819600361 953.51708993586 59.926 2 -0.16035562504370607 0.037525102801950844 0.9438714419765777 ['ENST00000521509.5_1_8:67955470-67971691:-|nuORF', 'ENSG00000121022|ENST00000357849|COPS5', 'ENST00000521386.5_1_8:67955470-67955572:-|nuORF'] 52109 4585 KLQEEEERMK True NCI_RA007_Epitope_Rep2 1318.6551004825799 1318.65346490379 22.46 3 -0.16038016901083094 0.037553299298265744 0.9438714419765777 ['nc|ENSG00000176783|Q96T51-3|RUFY1'] 80330 4132 PLFRPRSEF True NCI_RA007_Epitope_Rep5 1147.61382772395 1147.61218490379 22.391 3 -0.16038825286006775 0.037553299298265744 0.9438714419765777 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 45421 4497 ISDSEGFK True PC9_epitope_Rep4 881.4130622287299 881.41196993586 23.772 2 -0.16042699558391624 0.037553299298265744 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 98344 5067 SIGTDNVCRDR True NCI_RA007_Epitope_Rep2 1234.57243348778 1234.5713299358601 24.336 2 -0.16043403227223593 0.037553299298265744 0.9438714419765777 ['KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion', 'ENSG00000086200|ENST00000325324|IPO11', 'nc|ENSG00000086200|Q9UI26-2|IPO11'] 33238 8282 GLAEVAAAV True H1975_Epitope_Rep3 799.4439684341899 799.44286993586 36.84 2 -0.16043728158983014 0.037553299298265744 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 81221 22805 PPLQLQELF True H1975_Epitope_Rep1 1083.59644632431 1083.5953499358602 94.85 2 -0.16046473281862253 0.037553299298265744 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000486282.6_1_1:110163774-110168851:+|nuORF'] 25283 8708 FEDVVNQSSPK True PC9_epitope_Rep1 1248.59863115228 1248.5975299358602 38.334 2 -0.16046689774204392 0.037553299298265744 0.9438714419765777 ['ENSG00000151923|ENST00000436547|TIAL1', 'nc|ENSG00000151923|Q01085-2|TIAL1', 'ENST00000489822.5_1_10:121336540-121356247:-|nuORF', 'ENST00000497671.5_1_10:121335179-121339984:-|nuORF'] 5637 14286 APAGGFQNIA True PC9_epitope_Rep1 944.4715801643599 944.47048993586 59.776 2 -0.16047732099139453 0.037553299298265744 0.9438714419765777 ['ENSG00000037897|ENST00000324871|METTL1'] 19851 17008 ELVITWETV True PC9_epitope_Rep1 1088.57537652656 1088.57426993586 70.244 2 -0.1605130536040874 0.037553299298265744 0.9438714419765777 ['ENSG00000144619|ENST00000418658|CNTN4', 'nc|ENSG00000144619|Q8IWV2-3|CNTN4', 'nc|ENSG00000144619|Q8IWV2-4|CNTN4', 'CNTN4|p.P724T|1|0.59|ENSG00000144619|chr3:3040043-3040043|C/A|missense_variant'] 30817 9551 GAPQVVAVTG True PC9_epitope_Rep4 897.4919812557698 897.4914349679301 44.352 1 -0.1605222223541627 0.037553299298265744 0.9438714419765777 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF'] 114750 11674 TSVPPGSAL True PC9_epitope_Rep1 827.4388830537499 827.43778993586 49.782 2 -0.16054094951955175 0.037553299298265744 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'nc|ENSG00000181555|Q9BYW2-2|SETD2'] 11346 10210 DFC[Carbamidomethyl]IQVGR True H1975_Epitope_Rep3 993.4702005447999 993.46910993586 44.318 2 -0.16054824999524903 0.037553299298265744 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'NMT1-NME1|1|fusion'] 117263 9747 VAAAAEILQ True H1975_Epitope_Rep3 884.49673228304 884.49618496793 42.514 1 -0.1605526666740932 0.037553299298265744 0.9438714419765777 ['ENSG00000109016|ENST00000395511|DHRS7B'] 72 8776 AAAIEVHEV True PC9_epitope_Rep2 937.48689587533 937.48578993586 39.112 2 -0.160557039775206 0.037553299298265744 0.9438714419765777 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH'] 18577 13726 ELAAELAL True H1975_Epitope_Rep2 828.4592841451599 828.45873496793 57.942 1 -0.1606985504171543 0.0376063473855272 0.9438714419765777 ['ENSG00000234438|ENST00000432196|KBTBD13'] 6446 6398 APSPATAAATA True PC9_epitope_Rep4 927.4661604307499 927.46506993586 31.701 2 -0.16069966530567875 0.0376063473855272 0.9438714419765777 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 63363 5078 LPEVGAKG True H1975_Epitope_Rep1 769.4334037504899 769.43230993586 24.604 2 -0.16071285981723457 0.0376063473855272 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS', 'ENST00000489655.1_1_2:74689957-74690534:-|nuORF'] 127345 21298 VQPFLRVPL True PC9_epitope_Rep1 1067.64915060351 1067.6480499358602 86.75 2 -0.16077067001144524 0.0376063473855272 0.9438714419765777 ['ENSG00000023287|ENST00000025008|RB1CC1', 'nc|ENSG00000023287|Q8TDY2-2|RB1CC1'] 659 19641 AATSVTFVGV True PC9_epitope_Rep1 950.5072969667399 950.5067449679301 80.375 1 -0.16077582953360628 0.0376063473855272 0.9438714419765777 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF'] 91389 5650 RNAGDEVTI True PC9_epitope_Rep2 973.48287312405 973.48176993586 27.118 2 -0.16083246130047385 0.0376063473855272 0.9438714419765777 ['SNTG2|p.V152F|1|0.22|ENSG00000172554|chr2:1165590-1165590|G/T|missense_variant', 'SNTG2|p.W268Cfs*12|2|0.89|ENSG00000172554|chr2:1237971-1237971|G/-|frameshift_variant', 'ENSG00000172554|ENST00000308624|SNTG2'] 47604 13562 IYNQVKQII True PC9_epitope_Rep4 1117.64954452633 1117.64844993586 60.061 2 -0.1608420719374431 0.03762186962339897 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 63470 13537 LPHGFTNMA True PC9_epitope_Rep1 986.4643866089401 986.46328993586 56.926 2 -0.16084945889717236 0.03762186962339897 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 33240 8705 GLAEVAAAV True NCI_RA007_Epitope_Rep2 799.4439684341899 799.44341496793 38.508 1 -0.16086159898501082 0.03762186962339897 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 54255 19375 KYPHYFPLL True PC9_epitope_Rep2 1176.6331661862 1176.63151490379 79.902 3 -0.1608894868955574 0.03762186962339897 0.9438714419765777 ['ENSG00000172009|ENST00000307741|THOP1'] 22785 6552 EVDEYRRHWWR True NCI_RA007_Epitope_Rep1 1630.7753071579798 1630.7736749037902 29.5 3 -0.16089486862569577 0.03762186962339897 0.9438714419765777 ['nc|ENSG00000010072|Q9H040-3|SPRTN', 'nc|ENSG00000010072|Q9H040-2|SPRTN', 'ENSG00000010072|ENST00000295050|SPRTN'] 135006 10631 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.38026993586 46.205 2 -0.1609339353267757 0.037640266865477626 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 106568 13995 SVWTKVEGV True PC9_epitope_Rep4 1003.5338460677498 1003.53274993586 61.739 2 -0.1610616944387155 0.03765722368773177 0.9438714419765777 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 130647 10924 VVASRQYTV True PC9_epitope_Rep6 1021.5556441414901 1021.55454993586 52.888 2 -0.16108436881621996 0.03765722368773177 0.9438714419765777 ['nc|ENSG00000164694|Q4ZHG4-2|FNDC1', 'ENSG00000164694|ENST00000297267|FNDC1'] 96197 13978 SEEFRLLN True PC9_epitope_Rep1 1006.5083595958998 1006.50726993586 58.604 2 -0.16114567860784504 0.03765722368773177 0.9438714419765777 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10'] 104634 7564 SSVVTVPSS True NCI_RA007_Epitope_Rep4 861.44436235701 861.44381496793 35.741 1 -0.16120495203108873 0.037672018348623854 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 81121 4137 PPHPPPPPP True NCI_RA007_Epitope_Rep3 931.49158733295 931.49048993586 22.846 2 -0.1612096671189789 0.037672018348623854 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 138884 17622 YSDSGLFGIY True H1975_Epitope_Rep2 1120.5076908895599 1120.50717496793 73.1 1 -0.1612586139044295 0.037672018348623854 0.9438714419765777 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'ENSG00000140740|ENST00000268379|UQCRC2'] 75883 17140 NRDPILVSL True PC9_epitope_Rep4 1025.58694426977 1025.58637496793 73.934 1 -0.16129459998348034 0.037672018348623854 0.9438714419765777 ['ENSG00000106789|ENST00000375077|CORO2A'] 69654 11085 LVVSTQTALA True NCI_RA007_Epitope_Rep1 1001.5757108797299 1001.57517496793 47.115 1 -0.1612952228983905 0.037672018348623854 0.9438714419765777 ['CON__P02769'] 55511 16267 LAVVAGVAAE True PC9_epitope_Rep2 898.5123823471799 898.51128993586 67.812 2 -0.16133331167621567 0.037672018348623854 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 104254 12858 SSDPFLNSGTY True H1975_Epitope_Rep3 1186.51423282198 1186.5131299358602 54.681 2 -0.16152045213256716 0.03776325344952796 0.9438714419765777 ['nc|ENSG00000137693|P46937-4|YAP1', 'nc|ENSG00000137693|P46937-5|YAP1', 'nc|ENSG00000137693|P46937-3|YAP1', 'nc|ENSG00000137693|P46937-6|YAP1', 'nc|ENSG00000137693|P46937-7|YAP1', 'nc|ENSG00000137693|P46937-2|YAP1', 'nc|ENSG00000137693|P46937-8|YAP1', 'ENSG00000137693|ENST00000282441|YAP1', 'nc|ENSG00000137693|P46937-9|YAP1'] 30979 14511 GATDIALA True NCI_RA007_Epitope_Rep1 730.3861192049 730.3855749679301 60.491 1 -0.16155437536322864 0.03776325344952796 0.9438714419765777 ['ENST00000473361.5_1_1:32259103-32263870:-|nuORF', 'ENSG00000182070|ENST00000380367|OR52A1'] 64367 17930 LQPPPPTWA True PC9_epitope_Rep5 1005.52836676449 1005.52726993586 73.984 2 -0.16155981951979234 0.03776325344952796 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 128975 13863 VSVSWNQSL True PC9_epitope_Rep2 1018.5083595959 1018.50726993586 58.607 2 -0.161573232820877 0.03776325344952796 0.9438714419765777 ['ENST00000426158.1_3_7:89841229-89854412:+|nuORF', 'ENST00000482369.1_1_7:89845768-89854412:+|nuORF'] 18844 10607 ELEERQNL True NCI_RA007_Epitope_Rep1 1029.5090878718897 1029.50798993586 45.246 2 -0.16161300643073445 0.03776325344952796 0.9438714419765777 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'nc|ENSG00000176208|Q96QE3-2|ATAD5'] 69847 8708 LYAEKPPRCSC True H1975_Epitope_Rep1 1265.58966377505 1265.58856993586 38.421 2 -0.16161478606216248 0.03776325344952796 0.9438714419765777 ['ENST00000493450.1_1_20:37659368-37662889:+|nuORF'] 13953 10273 DRLKLQNEL True PC9_epitope_Rep4 1127.62987171091 1127.6287699358602 47.2 2 -0.1616915036575391 0.03777947639977069 0.9438714419765777 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 127043 9333 VPYPGMSNHEA True PC9_epitope_Rep5 1200.5233580370402 1200.52226993586 40.853 2 -0.16169521642572557 0.03777947639977069 0.9438714419765777 ['ENSG00000101213|ENST00000542869|PTK6'] 54524 16521 LAAGLLEEL True NCI_RA007_Epitope_Rep3 927.52769805815 927.52660993586 72.782 2 -0.16170802111596147 0.03777947639977069 0.9438714419765777 ['nc|ENSG00000043514|Q9H3H1-4|TRIT1', 'ENSG00000043514|ENST00000316891|TRIT1', 'nc|ENSG00000043514|Q9H3H1-3|TRIT1', 'nc|ENSG00000043514|Q9H3H1-2|TRIT1', 'nc|ENSG00000043514|Q9H3H1-5|TRIT1', 'ENST00000469476.2_1_1:40313418-40313755:-|nuORF'] 124801 6708 VLLGETGK True PC9_epitope_Rep3 815.47526856247 815.47416993586 30.825 2 -0.1617401397949487 0.03777947639977069 0.9438714419765777 ['ENSG00000142534|ENST00000270625|RPS11', 'ENST00000600027.5_1_19:49999677-50000944:+|nuORF', 'ENST00000599167.5_1_19:49999677-50000690:+|nuORF'] 18550 13564 EKTLYSFSE True PC9_epitope_Rep1 1102.51825557326 1102.51714993586 57.03 2 -0.16182706802951632 0.03779786359901397 0.9438714419765777 ['ENSG00000124177|ENST00000373233|CHD6'] 44671 20476 IPLTLLPAA True PC9_epitope_Rep4 907.5742543277498 907.57314993586 86.907 2 -0.16187820458184132 0.03781625009554383 0.9438714419765777 ['ENSG00000116903|ENST00000366645|EXOC8'] 90847 4760 RKVSINNTGL True NCI_RA007_Epitope_Rep3 1100.63020606408 1100.62910993586 25.683 2 -0.16190468880914444 0.03783391294378415 0.9438714419765777 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF'] 44359 16059 IMRFLRRCRHR True H1975_Epitope_Rep3 1542.8612432251 1542.8596049037901 67.228 3 -0.1619786728486147 0.03783391294378415 0.9438714419765777 ['nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1', 'ENST00000574442.1_1_17:4872053-4872704:-|nuORF', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-5|CAMTA2'] 18051 12295 EIIRQLNGV True PC9_epitope_Rep4 1040.59784330664 1040.59727496793 55.107 1 -0.16215849116600878 0.03792872838444636 0.9438714419765777 ['ENST00000513761.5_1_4:170542142-170557087:+|nuORF'] 114326 18116 TSCRYMTVLFY True H1975_Epitope_Rep2 1382.6362796142998 1382.6351899358601 75.073 2 -0.16220472381990722 0.03796549286355733 0.9438714419765777 ['ENSG00000178467|ENST00000383729|P4HTM'] 98498 18399 SILEQINALTG True PC9_epitope_Rep2 1157.6292030045697 1157.62810993586 76.103 2 -0.16220736773726943 0.03796549286355733 0.9438714419765777 ['ENST00000560401.5_1_15:84771677-84780823:+|nuORF'] 31327 4712 GEAGTPVAA True H1975_Epitope_Rep2 771.3762827971899 771.37573496793 23.215 1 -0.16226667746585502 0.037983148321519326 0.9438714419765777 ['ENSG00000105245|ENST00000252891|NUMBL'] 62518 11665 LLSTTTVP True PC9_epitope_Rep1 830.4749342093 830.47382993586 49.746 2 -0.16226756836891845 0.037983148321519326 0.9438714419765777 ['OR52B2|p.P131Hfs*2|1|0.14|ENSG00000255307|chr11:6169935-6169935|G/-|frameshift_variant', 'OR52B2|p.F170Sfs*3|1|0.18|ENSG00000255307|chr11:6169818-6169818|A/-|frameshift_variant', 'ENSG00000255307|ENST00000530810|OR52B2'] 107611 7186 TAGREARQVFR True NCI_RA007_Epitope_Rep5 1289.6952659321298 1289.6936249037901 34.32 3 -0.16235768448656784 0.0380000764204654 0.9438714419765777 ['ENST00000559239.1_1_15:65112173-65113270:-|nuORF'] 117031 10229 TYQDRLTKL True PC9_epitope_Rep5 1136.61897267404 1136.61733490379 44.334 3 -0.1623587047713761 0.0380000764204654 0.9438714419765777 ['ENST00000519879.1_1_8:118533115-118541135:+|nuORF', 'nc|ENSG00000164758|Q96HR3-2|MED30', 'ENSG00000164758|ENST00000297347|MED30'] 46137 8172 ITAPPGTAA True PC9_epitope_Rep3 797.42831837005 797.4272299358599 36.411 2 -0.16246860733170132 0.0380000764204654 0.9438714419765777 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 36066 11518 GVDYDMEEKP True PC9_epitope_Rep1 1181.4910548492498 1181.48941490379 49.183 3 -0.16248674920983652 0.03801264541269508 0.9438714419765777 ['BBS5|p.E268D|1|0.37|ENSG00000163093|chr2:169499608-169499608|G/T|missense_variant'] 29427 10835 FVFSYGPEK True NCI_RA007_Epitope_Rep5 1072.5229470308798 1072.52184993586 48.312 2 -0.16249932960414967 0.03801264541269508 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'nc|ENSG00000079308|Q9HBL0-2|TNS1', 'ENST00000479185.1_1_2:218746916-218750490:-|nuORF'] 105375 6210 STYRDFQQA True PC9_epitope_Rep6 1114.50433684462 1114.5032299358602 32.349 2 -0.16250131231067888 0.03801264541269508 0.9438714419765777 ['ENSG00000125676|ENST00000245838|THOC2'] 86225 15866 QPYMPTVSA True PC9_epitope_Rep1 992.4637179025999 992.4631649679301 65.837 1 -0.16253280545434323 0.03801264541269508 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'ENST00000537638.6_1_12:57905855-57911076:+|nuORF', 'MARS1|p.M755T|1|0.48|ENSG00000166986|chr12:57515209-57515209|T/C|missense_variant', 'ENST00000551805.1_1_12:57908749-57909143:+|nuORF'] 45402 10988 ISDRPSLSV True PC9_epitope_Rep4 972.52400966004 972.52290993586 50.041 2 -0.16258650799747323 0.03801264541269508 0.9438714419765777 ['nc|ENSG00000239961|P59901-2|LILRA4', 'ENSG00000239961|ENST00000291759|LILRA4'] 77245 13483 NYIMKIHNF True PC9_epitope_Rep2 1178.5906497512199 1178.58901490379 57.146 3 -0.1625933692946117 0.03801264541269508 0.9438714419765777 ['ENSG00000101126|ENST00000621696|ADNP'] 127151 12916 VQDTSCTDR True PC9_epitope_Rep1 1023.4291232990299 1023.4280299358601 54.554 2 -0.16260826460088382 0.03801264541269508 0.9438714419765777 ['WSCD1|p.R339S|1|0.37|ENSG00000179314|chr17:6110776-6110776|C/A|missense_variant'] 13981 5476 DRQQMEAL True PC9_epitope_Rep4 989.4600295044899 989.4589299358599 27.812 2 -0.1626276769127462 0.03801264541269508 0.9438714419765777 ['ENSG00000105472|ENST00000250340|CLEC11A'] 32974 11760 GITFIAAK True PC9_epitope_Rep2 819.4854393233499 819.48434993586 50.568 2 -0.1626549091848729 0.03801264541269508 0.9438714419765777 ['ENSG00000117984|ENST00000236671|CTSD'] 41714 15027 IDMNDIKAFY True H1975_Epitope_Rep1 1228.579810284 1228.5787099358602 63.049 2 -0.16282019636064599 0.03806922371638142 0.9438714419765777 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 54770 13899 LAESNDVAI True PC9_epitope_Rep2 930.4658260775799 930.46472993586 58.742 2 -0.16290592761248346 0.03808396042629589 0.9438714419765777 ['ENST00000425050.5_1_10:109631494-109803030:-|nuORF'] 102579 17475 SQANIAQVL True PC9_epitope_Rep5 942.5134449763399 942.51289496793 72.22 1 -0.16292448131739626 0.03808396042629589 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000441188.2_1_X:92478653-92479352:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1', 'AP1B1|p.D515Rfs*2|1|0.24|ENSG00000100280|chr22:29341754-29341755|-/T|frameshift_variant'] 15380 7427 EALNRDLVP True NCI_RA007_Epitope_Rep5 1025.5505587610498 1025.54946993586 35.246 2 -0.16293217953092948 0.03808396042629589 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000144840|ENST00000273375|RABL3'] 184 12812 AAEPGNLAGV True PC9_epitope_Rep2 897.4555957470499 897.45448993586 54.583 2 -0.1629391758182031 0.03808396042629589 0.9438714419765777 ['ENSG00000095906|ENST00000262302|NUBP2', 'ENST00000566447.5_1_16:1832991-1836957:+|nuORF', 'ENST00000566090.5_1_16:1832991-1836988:+|nuORF', 'NUBP2|p.K115Sfs*31|1|0.24|ENSG00000095906|chr16:1787684-1787684|A/-|frameshift_variant'] 123494 15058 VIGPPVVL True H1975_Epitope_Rep2 792.5109257952 792.50982993586 63.072 2 -0.16295509244797535 0.03808396042629589 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 33629 9974 GLNDILVK True H1975_Epitope_Rep1 870.51746772762 870.51636993586 43.302 2 -0.16301221032959548 0.03808396042629589 0.9438714419765777 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 106574 8348 SVYDGHGGEEV True PC9_epitope_Rep5 1147.47818166643 1147.47708993586 37.051 2 -0.16307018702425843 0.03810233197731049 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G'] 94694 6269 RYLENGKETL True PC9_epitope_Rep2 1221.6353510141698 1221.63424993586 29.511 2 -0.16315702945622482 0.03819636752544833 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C', 'ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910749-29913287:+|nuORF', 'nc|ENSG00000206341|P01893|HLA-H'] 26197 13468 FHSRTIYDI True PC9_epitope_Rep5 1150.5771078620598 1150.5754649037901 56.823 3 -0.1631680660660513 0.03819636752544833 0.9438714419765777 ['ENSG00000144021|ENST00000488633|CIAO1'] 108323 7502 TEDNDDDLYG True NCI_RA007_Epitope_Rep3 1155.4203920067898 1155.4192899358602 36.631 2 -0.16321144934065837 0.03821400607299047 0.9438714419765777 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF'] 119306 6739 VELPHWLRR True NCI_RA007_Epitope_Rep4 1204.68291034328 1204.6818099358602 32.543 2 -0.1632479340395775 0.03821400607299047 0.9438714419765777 ['ENST00000473770.5_1_22:32017296-32019834:-|nuORF', 'ENST00000460723.5_1_22:32017538-32058194:-|nuORF', 'nc|ENSG00000241878|Q9UG56-2|PISD', 'ENSG00000241878|ENST00000439502|PISD'] 30684 16382 GALNKASTVI True PC9_epitope_Rep5 972.56039516876 972.55928993586 68.01 2 -0.1633030109937446 0.03823164327317865 0.9438714419765777 ['nc|ENSG00000240184|Q9UN70-2|PCDHGC3', 'ENSG00000240184|ENST00000308177|PCDHGC3'] 120090 9952 VFHPRQELI True PC9_epitope_Rep4 1137.62947778809 1137.62782490379 45.935 3 -0.16330960015114593 0.03823164327317865 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 14350 7846 DTDYRSLP True H1975_Epitope_Rep2 965.4454249861699 965.44432993586 35.129 2 -0.16334601797020443 0.038250009548180114 0.9438714419765777 ['nc|ENSG00000160185|P57075-3|UBASH3A'] 64292 5404 LQLSPHQIQA True NCI_RA007_Epitope_Rep3 1133.6193070272102 1133.61820993586 28.267 2 -0.16345139489054658 0.0382874711173067 0.9438714419765777 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 5849 6949 APGKGILAA True PC9_epitope_Rep2 796.4806882960798 796.47958993586 32.128 2 -0.1634831590991925 0.03832419943096106 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 78867 5164 PESRNRIR True NCI_RA007_Epitope_Rep4 1026.56827451386 1026.5671699358602 26.388 2 -0.16351665241600152 0.03832419943096106 0.9438714419765777 ['ENSG00000160877|ENST00000292431|NACC1'] 111511 16425 TLLQEAQV True PC9_epitope_Rep4 900.4916469025999 900.49054993586 71.14 2 -0.16362110151016163 0.03835726286848939 0.9438714419765777 ['nc|ENSG00000087460|P84996|GNAS'] 1578 18297 AEFGDFDIK True PC9_epitope_Rep3 1040.48147614172 1040.4803699358602 75.584 2 -0.16363771504375257 0.03835726286848939 0.9438714419765777 ['nc|ENSG00000156531|Q8IWS0-4|PHF6', 'nc|ENSG00000156531|Q8IWS0-2|PHF6', 'nc|ENSG00000156531|Q8IWS0-5|PHF6', 'nc|ENSG00000156531|Q8IWS0-3|PHF6', 'ENSG00000156531|ENST00000370803|PHF6'] 125932 8684 VPAAAAVAA True PC9_epitope_Rep4 739.42283906679 739.42229496793 40.894 1 -0.1636377841478344 0.03835726286848939 0.9438714419765777 ['ENSG00000130699|ENST00000252996|TAF4'] 4260 22197 AIIGGMFTV True PC9_epitope_Rep3 907.48372507119 907.48262993586 90.666 2 -0.1636732596043578 0.03835726286848939 0.9438714419765777 ['ENSG00000125991|ENST00000348547|ERGIC3', 'nc|ENSG00000125991|Q9Y282-3|ERGIC3', 'ENST00000488384.1_1_20:34144716-34145272:+|nuORF'] 140455 17615 YYGSAAEW True PC9_epitope_Rep3 945.3868474808899 945.3862949679301 72.943 1 -0.16367780268412419 0.03835726286848939 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'nc|ENSG00000101158|Q8IXH7-3|NELFCD', 'ENST00000482747.1_1_20:57556337-57564148:+|nuORF', 'ENST00000464363.5_1_20:57556337-57561303:+|nuORF'] 99783 13475 SLGQMENNNL True PC9_epitope_Rep4 1118.50262259246 1118.5015299358602 59.729 2 -0.1636830298200755 0.03835726286848939 0.9438714419765777 ['ENSG00000145723|ENST00000399004|GIN1'] 48055 10111 KALSDHHIYL True PC9_epitope_Rep5 1195.63495709135 1195.63330490379 43.877 3 -0.16370165349926197 0.03835726286848939 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 111668 21359 TLPDLVPQL True PC9_epitope_Rep4 994.5698972232999 994.5693449679301 90.325 1 -0.1637426644114463 0.038389584605986564 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 66677 10149 LSSVVTVPS True NCI_RA007_Epitope_Rep5 887.49639792987 887.4958449679301 45.671 1 -0.16376705204679937 0.038389584605986564 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 85468 13789 QLHCHPACL True PC9_epitope_Rep1 1020.4633410631199 1020.46224993586 57.884 2 -0.16380711009688056 0.038389584605986564 0.9438714419765777 ['ENSG00000175595|ENST00000311895|ERCC4', 'ENST00000576348.1_1_16:14014055-14020614:+|nuORF', 'nc|ENSG00000175595|Q92889-2|ERCC4'] 44914 5909 IQDSRTLP True NCI_RA007_Epitope_Rep1 928.4977949122 928.49668993586 27.036 2 -0.1638246927821526 0.038389584605986564 0.9438714419765777 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 19831 8482 ELVDGHFDTKI True H1975_Epitope_Rep1 1272.6350166609998 1272.6339099358602 37.555 2 -0.16386331783992322 0.038389584605986564 0.9438714419765777 ['nc|ENSG00000145293|Q9UHY7-2|ENOPH1', 'ENSG00000145293|ENST00000273920|ENOPH1'] 68989 17307 LVGPVLGAA True PC9_epitope_Rep2 795.4854393233499 795.48489496793 71.831 1 -0.16387181226160968 0.038389584605986564 0.9438714419765777 ['ADAM9-RNF170|1|fusion', 'ADAM9-HTRA4|1|fusion', 'nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 26479 20398 FIQKYLSL True PC9_epitope_Rep3 1010.58006798418 1010.57896993586 83.712 2 -0.16392672350004245 0.038389584605986564 0.9438714419765777 ['ENST00000433866.6_1_16:83845533-83845581:+|nuORF'] 35965 14524 GVAVAVAEIG True PC9_epitope_Rep6 884.4967322830399 884.49618496793 67.757 1 -0.16400377454626883 0.038389584605986564 0.9438714419765777 ['ENST00000492039.6_1_2:68374697-68384644:-|nuORF', 'ENST00000468984.1_1_2:68384284-68384644:-|nuORF'] 40164 7680 HRETSMVHEL True PC9_epitope_Rep5 1237.5873552759301 1237.58569490379 34.486 3 -0.16407301677704172 0.03840720803268049 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF'] 44577 18040 IPFGITEEA True PC9_epitope_Rep6 975.49131254943 975.49020993586 82.023 2 -0.16409731027417332 0.03840720803268049 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 103373 18993 SQVPHLPVL True PC9_epitope_Rep1 988.5705659296399 988.56946993586 77.842 2 -0.16418009685662496 0.03842556359402142 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2', 'nc|ENSG00000196498|Q9Y618-2|NCOR2'] 18988 7431 ELGECELP True H1975_Epitope_Rep2 888.389884256 888.38878993586 33.528 2 -0.1641971992284228 0.03844391845460793 0.9438714419765777 ['ENSG00000095203|ENST00000374566|EPB41L4B', 'nc|ENSG00000095203|Q9H329-2|EPB41L4B'] 74500 16875 NKNTESIIEL True PC9_epitope_Rep5 1159.6084675599898 1159.60736993586 69.92 2 -0.1642395499097648 0.03845860213001489 0.9438714419765777 ['ENSG00000166402|ENST00000299506|TUB', 'nc|ENSG00000166402|P50607-2|TUB'] 97359 16085 SFYPEEVSSI True PC9_epitope_Rep3 1156.52882025696 1156.5277299358602 67.019 2 -0.1642434663669779 0.03845860213001489 0.9438714419765777 ['ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 35364 11089 GTAPALAGL True H1975_Epitope_Rep1 769.43340375049 769.4328549679301 47.617 1 -0.1642958562627248 0.03845860213001489 0.9438714419765777 ['ENST00000448759.1_1_1:43352460-43353038:-|nuORF'] 76879 14809 NVIQSTAVTTV True PC9_epitope_Rep4 1131.61355294043 1131.61244993586 64.901 2 -0.1643079938329949 0.03845860213001489 0.9438714419765777 ['ENSG00000164022|ENST00000672341|AIMP1', 'nc|ENSG00000164022|Q12904-2|AIMP1'] 126935 11869 VPVHDIYVSQ True PC9_epitope_Rep1 1155.59242357303 1155.5913299358601 50.519 2 -0.16431543403733256 0.03845860213001489 0.9438714419765777 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 6895 16347 AQIKPFYTV True PC9_epitope_Rep5 1065.5858816406098 1065.58478993586 67.876 2 -0.16434712967333145 0.03845860213001489 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 6202 14783 APRAALVFA True PC9_epitope_Rep1 914.5337864980999 914.53268993586 61.682 2 -0.16439264434375775 0.03847695390781563 0.9438714419765777 ['ENSG00000170006|ENST00000304385|TMEM154'] 100168 10559 SLLEQKEKEN True PC9_epitope_Rep2 1216.6299312805597 1216.62882993586 45.933 2 -0.16441305546288357 0.03849383564258178 0.9438714419765777 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'WNK1-ERC1|2|fusion', 'WNK1-ERC1|1|fusion', 'ENST00000539007.5_1_12:1192665-1225250:+|nuORF'] 107875 14373 TASPTTTAAI True PC9_epitope_Rep4 932.48147614172 932.48036993586 63.193 2 -0.16442431626531956 0.03849383564258178 0.9438714419765777 ['ENST00000319070.2_1_16:681311-683059:+|nuORF'] 140498 19188 YYIFIPSKF True PC9_epitope_Rep6 1176.6219327961599 1176.62029490379 86.458 3 -0.16445013904431052 0.03849383564258178 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 58582 6867 LFEQQRQRAD True NCI_RA007_Epitope_Rep3 1289.64764703337 1289.64601490379 34.119 3 -0.1646269003563865 0.03852832853080931 0.9438714419765777 ['nc|ENSG00000166317|Q9H987-2|SYNPO2L', 'ENSG00000166317|ENST00000394810|SYNPO2L'] 119004 10451 VEFNGKLLA True NCI_RA007_Epitope_Rep5 989.5545815123298 989.55348993586 46.831 2 -0.1646352649971554 0.03852832853080931 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 117077 21865 TYQVLAVTF True PC9_epitope_Rep2 1040.5542471591598 1040.55367496793 89.579 1 -0.16467005441252516 0.03852832853080931 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 55679 23766 LDAYSTLIF True PC9_epitope_Rep1 1041.53826274185 1041.53767496793 96.211 1 -0.1646939935737897 0.03852832853080931 0.9438714419765777 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 125402 5226 VLTEVDGK True NCI_RA007_Epitope_Rep5 859.4650978015899 859.46400993586 26.799 2 -0.16473153310071204 0.03852832853080931 0.9438714419765777 ['ENSG00000150656|ENST00000358821|CNDP1'] 24514 9056 FAKDFMTYLSA True NCI_RA007_Epitope_Rep2 1292.61111041228 1292.61000993586 39.829 2 -0.16475680103653573 0.038542998339979775 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000454465.1_1_2:87398353-87423749:+|nuORF'] 69953 15619 LYEEKFESI True PC9_epitope_Rep2 1156.5652057656798 1156.5641099358602 65.355 2 -0.16476541954946614 0.038542998339979775 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'nc|ENSG00000181555|Q9BYW2-2|SETD2'] 107010 14878 SYLKQLPHF True PC9_epitope_Rep4 1131.6076797143498 1131.60604490379 65.166 3 -0.16478108558350468 0.038542998339979775 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 56298 14742 LDQTLLDLNEM-[Oxidation] True H1975_Epitope_Rep3 1319.6278830556698 1319.6267899358602 62.08 2 -0.16482188883325632 0.038542998339979775 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 45503 10536 ISERQAEVL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 51.319 2 -0.16487260942370122 0.038542998339979775 0.9438714419765777 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 84523 11744 QGVVTTLENV True PC9_epitope_Rep5 1058.56078909158 1058.5596899358602 50.174 2 -0.1649633189052535 0.038542998339979775 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'ENST00000492816.6_1_2:216226280-216244056:-|nuORF'] 65541 5642 LSGCTCRWR True NCI_RA007_Epitope_Rep3 1080.49570382056 1080.4946099358601 29.182 2 -0.1650617347640813 0.03859214040442579 0.9438714419765777 ['ENST00000584408.5_1_17:80407084-80408584:-|nuORF'] 71409 19404 MILDEVHTI True PC9_epitope_Rep3 1069.54778187973 1069.54668993586 79.862 2 -0.16506790595614793 0.03859214040442579 0.9438714419765777 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3'] 20284 8521 EPAGEAVALA True H1975_Epitope_Rep2 926.4709114580198 926.4703649679301 37.731 1 -0.16509010997499168 0.03859214040442579 0.9438714419765777 ['ENSG00000104626|ENST00000250263|ERI1'] 7689 4965 ASPPEQPP True H1975_Epitope_Rep1 821.3919328613299 821.39082993586 24.172 2 -0.16509305711491531 0.03859214040442579 0.9438714419765777 ['ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A'] 45749 10772 ISNEFKVEV True PC9_epitope_Rep2 1063.5549754351498 1063.5538699358601 46.754 2 -0.16511409033304794 0.03859214040442579 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 127081 13024 VQADNIRSL True PC9_epitope_Rep1 1014.54580773378 1014.5447099358599 54.967 2 -0.16511779306222693 0.03859214040442579 0.9438714419765777 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 23783 9920 EYKNTNEMF True PC9_epitope_Rep4 1174.49647458286 1174.49536993586 45.809 2 -0.16511839171054365 0.03859214040442579 0.9438714419765777 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 77602 18601 NYTLSLIT True PC9_epitope_Rep6 923.49639792987 923.4958449679301 84.192 1 -0.16512224075642679 0.03859214040442579 0.9438714419765777 ['CD109|p.A1090S|1|0.27|ENSG00000156535|chr6:73808161-73808161|G/T|missense_variant'] 125028 24031 VLPDMFFSF True PC9_epitope_Rep2 1101.5205045027299 1101.51940993586 97.933 2 -0.16512345736189588 0.03859214040442579 0.9438714419765777 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2', 'ENST00000562567.6_1_16:68267161-68268061:-|nuORF', 'ENST00000563159.5_1_16:68267455-68268061:-|nuORF', 'ENST00000564465.1_1_16:68267455-68269590:-|nuORF', 'ENST00000569964.5_1_16:68267161-68269644:-|nuORF', 'ENST00000251366.7_1_16:68266662-68269948:-|nuORF'] 41285 19383 IAGPGLPDL True PC9_epitope_Rep5 851.47526856247 851.47472496793 79.602 1 -0.1652057346649646 0.03859214040442579 0.9438714419765777 ['nc|ENSG00000284922|Q8WZ04-2|TOMT', 'nc|ENSG00000284922|Q8WZ04|TOMT'] 46374 11026 ITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep1 1118.5277749905702 1118.52727496793 47.372 1 -0.16522202351132717 0.03859214040442579 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 55238 19751 LAQAELPAI True PC9_epitope_Rep4 924.5280324113199 924.52692993586 84.097 2 -0.16527493153853384 0.03862881996108504 0.9438714419765777 ['DNAJB6-AGT|1|fusion', 'ENSG00000135744|ENST00000366667|AGT'] 63992 19537 LQAPPLTSL True PC9_epitope_Rep4 938.5436824754601 938.5431349679301 83.27 1 -0.16528322097111534 0.03862881996108504 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 113436 12565 TQNEVAAAL True PC9_epitope_Rep2 915.4661604307498 915.46561496793 53.64 1 -0.16546254363468157 0.03864199885561701 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 99211 7056 SLAVQGGK True PC9_epitope_Rep3 758.4286527232199 758.42754993586 32.151 2 -0.16546958962275474 0.03864199885561701 0.9438714419765777 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A'] 106891 20544 SYILRLEEI True PC9_epitope_Rep5 1134.62847472858 1134.62736993586 84.067 2 -0.1655011221999633 0.03864199885561701 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 113135 15759 TQAPPNVVL True PC9_epitope_Rep2 937.5232813840499 937.52218993586 65.884 2 -0.16554286714667887 0.03864199885561701 0.9438714419765777 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF', 'ENSG00000205593|ENST00000413817|DENND6B'] 35368 16272 GTASGFYTV True PC9_epitope_Rep1 901.4181476091701 901.4175949679301 67.409 1 -0.16558327053854482 0.03864199885561701 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 69348 3946 LVQADEKEANV True H1975_Epitope_Rep3 1214.6142812164198 1214.6131899358602 20.307 2 -0.16561899394576826 0.03864199885561701 0.9438714419765777 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 116521 15870 TYDYNFHSF True PC9_epitope_Rep6 1192.48253877088 1192.4814499358602 73.32 2 -0.1656202892843543 0.03864199885561701 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'CDKAL1-ASH1L|1|fusion'] 119565 9975 VERGQTKTI True PC9_epitope_Rep5 1030.5771078620598 1030.5760099358602 43.344 2 -0.1656267255771306 0.03864199885561701 0.9438714419765777 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000412120.2_1_1:1853728-1858343:-|nuORF', 'ENST00000464311.5_1_1:1853728-1858229:-|nuORF'] 97152 17413 SFFLSCSLCL True NCI_RA007_Epitope_Rep4 1118.5140392233 1118.5129499358602 75.401 2 -0.1657709309796449 0.03867571897169883 0.9438714419765777 ['ENST00000581424.1_1_17:61228485-61228857:+|nuORF'] 45268 9319 IRYPDSHQL True PC9_epitope_Rep3 1127.57235683479 1127.57071490379 40.787 3 -0.16581545915622325 0.03867571897169883 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2'] 136633 7746 YIDHGDPQV True PC9_epitope_Rep1 1042.4719740871801 1042.47086993586 34.617 2 -0.16586997682064542 0.03867571897169883 0.9438714419765777 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3131970-3189635:+|nuORF'] 100953 9472 SLSREVAVV True PC9_epitope_Rep1 958.5447451046198 958.54364993586 41.29 2 -0.16592174590662248 0.03867571897169883 0.9438714419765777 ['ENSG00000188112|ENST00000341865|C6orf132'] 91509 6043 RPAAGFVA True PC9_epitope_Rep2 787.4340724568299 787.43296993586 28.636 2 -0.16596681139991182 0.03867571897169883 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 134522 15815 WVDSDQLLY True H1975_Epitope_Rep2 1137.53423999057 1137.53367496793 66.019 1 -0.16601690489531962 0.03867571897169883 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 124185 16972 VLADVIDN True PC9_epitope_Rep2 857.44944773745 857.4488949679301 70.53 1 -0.1661075498923308 0.03872850005720606 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 116191 13847 TVTNAVVTV True PC9_epitope_Rep3 902.50729696674 902.50618993586 58.343 2 -0.16612168185053214 0.03872850005720606 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 77808 18572 PAEPAFLA True PC9_epitope_Rep4 814.4225047136199 814.4219549679301 79.514 1 -0.16613333417895912 0.03872850005720606 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 38968 19064 HIYDTIVNV True PC9_epitope_Rep5 1072.55530978832 1072.5542099358602 78.359 2 -0.1661527599832428 0.03872850005720606 0.9438714419765777 ['nc|ENSG00000088836|Q8NBS3-2|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-5|SLC4A11', 'ENSG00000088836|ENST00000642402|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-1|SLC4A11', 'nc|ENSG00000088836|Q8NBS3-4|SLC4A11'] 130761 14729 VVDSGAGFTV True PC9_epitope_Rep6 950.4709114580199 950.46980993586 68.605 2 -0.1661620291864514 0.03872850005720606 0.9438714419765777 ['ENSG00000110375|ENST00000264031|UPK2', 'ENST00000534788.1_1_11:118795899-118828340:+|nuORF'] 917 4916 ADRLKLRPR True NCI_RA007_Epitope_Rep4 1123.6938093801498 1123.6921649037902 25.368 3 -0.16616950553544652 0.03872850005720606 0.9438714419765777 ['ENSG00000107863|ENST00000396432|ARHGAP21', 'ENST00000486374.5_1_10:24873343-24884978:-|nuORF'] 44995 10137 IQKNRRVVL True PC9_epitope_Rep4 1124.71421047156 1124.71255490379 46.669 3 -0.16624592489547613 0.03874682989150125 0.9438714419765777 ['nc|ENSG00000172663|Q9H6X4-2|TMEM134', 'nc|ENSG00000172663|Q9H6X4-3|TMEM134', 'ENSG00000172663|ENST00000308022|TMEM134'] 64551 17525 LRDGQILEL True PC9_epitope_Rep2 1055.59750895347 1055.59697496793 72.673 1 -0.16630153818133664 0.03878274796933989 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 2170 8586 AEMPADSGYPA True H1975_Epitope_Rep3 1107.45427541771 1107.45377496793 38.017 1 -0.16630764916233273 0.03878274796933989 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 42782 20616 IFIDKIYSI True PC9_epitope_Rep2 1110.63249747986 1110.6314099358601 84.734 2 -0.1663493210663271 0.03878274796933989 0.9438714419765777 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 88382 6621 QYNPVKQQL True NCI_RA007_Epitope_Rep3 1116.5927579262 1116.5916699358602 33.104 2 -0.16652652584621186 0.038801075371327244 0.9438714419765777 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 112871 11359 TPPGPLASA True PC9_epitope_Rep1 809.42831837005 809.4272299358599 48.573 2 -0.1665692974753807 0.038819402074435634 0.9438714419765777 ['ENSG00000124875|ENST00000226317|CXCL6'] 627 20539 AASYSWTV True PC9_epitope_Rep5 883.40758292547 883.40648993586 84.047 2 -0.1666589334458285 0.038856794219146215 0.9438714419765777 ['MUC16|p.D3590Y|1|0.26|ENSG00000181143|chr19:8966002-8966002|C/A|missense_variant'] 117981 15556 VASEIMAVL True NCI_RA007_Epitope_Rep3 931.50485443859 931.50374993586 68.755 2 -0.16676321974315728 0.03887363684892854 0.9438714419765777 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF', 'ENST00000554677.1_1_14:64902319-64908231:+|nuORF', 'ENST00000413059.1_1_X:57419910-57420861:-|nuORF', 'ENSG00000120254|ENST00000367321|MTHFD1L'] 6979 6665 [Acetylation]-AQQAADKY True NCI_RA007_Epitope_Rep1 935.4348606187698 935.43376993586 29.937 2 -0.1668018911015406 0.03887363684892854 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 35276 14184 GSPALFTI True NCI_RA007_Epitope_Rep4 804.43815477776 804.43760496793 61.838 1 -0.1668659136908359 0.03887363684892854 0.9438714419765777 ['FLNA|p.R1087L|1|0.18|ENSG00000196924|chrX:154360535-154360535|C/A|missense_variant'] 37703 6125 HANVPERSNVG True PC9_epitope_Rep3 1178.57923312038 1178.57758490379 28.607 3 -0.16692131926473755 0.038891960421710864 0.9438714419765777 ['nc|ENSG00000140937|P55287-2|CDH11', 'ENST00000569128.1_1_16:65025665-65032510:-|nuORF', 'CDH11|p.R341Kfs*4|1|0.09|ENSG00000140937|chr16:64982279-64982280|-/T|frameshift_variant', 'ENSG00000140937|ENST00000268603|CDH11'] 98130 13269 SIAVENQL True PC9_epitope_Rep5 872.46034677432 872.45924993586 56.051 2 -0.16698329144495938 0.0389286054713564 0.9438714419765777 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'KIAA0247-FARP1|1|fusion'] 128999 19147 VSYLHMLQL True PC9_epitope_Rep1 1102.58450174162 1102.5834099358601 78.441 2 -0.16700393377576156 0.0389286054713564 0.9438714419765777 ['ENSG00000183111|ENST00000333677|ARHGEF37'] 24229 18278 EYVSQHLVF True PC9_epitope_Rep3 1120.5553097883198 1120.5542099358602 75.513 2 -0.16709970386318673 0.03894692694829953 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 69311 14484 LVPPDQPEV True PC9_epitope_Rep2 992.51786165044 992.51676993586 60.983 2 -0.16720514099151584 0.038983567806626256 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 113278 5091 TQGPVHETV True PC9_epitope_Rep5 966.47705946762 966.47596993586 24.608 2 -0.16725985243491887 0.038983567806626256 0.9438714419765777 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 91390 6839 RNAGDEVTI True PC9_epitope_Rep3 973.48287312405 973.48176993586 31.323 2 -0.16732871237127112 0.03902094969404678 0.9438714419765777 ['SNTG2|p.V152F|1|0.22|ENSG00000172554|chr2:1165590-1165590|G/T|missense_variant', 'SNTG2|p.W268Cfs*12|2|0.89|ENSG00000172554|chr2:1237971-1237971|G/-|frameshift_variant', 'ENSG00000172554|ENST00000308624|SNTG2'] 2794 5818 AEVEELRAT True H1975_Epitope_Rep3 1016.5138388991599 1016.51274993586 27.403 2 -0.16736960435882856 0.0390385238558167 0.9438714419765777 ['ENSG00000109063|ENST00000583535|MYH3'] 39081 10876 HLAAIVDAV True PC9_epitope_Rep5 907.51271670035 907.51160993586 46.822 2 -0.16738070608782618 0.0390385238558167 0.9438714419765777 ['ENSG00000128965|ENST00000617768|CHAC1', 'nc|ENSG00000128965|Q9BUX1-2|CHAC1'] 75246 12236 NPLALISR True H1975_Epitope_Rep3 882.52870111766 882.52815496793 52.241 1 -0.16745647526570523 0.03909496397392399 0.9438714419765777 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD', 'ENST00000482824.1_1_3:15676934-15683645:+|nuORF'] 17762 10614 EHTVETLVV True H1975_Epitope_Rep3 1025.53932537101 1025.53822993586 45.896 2 -0.1675011043106227 0.03913159499847514 0.9438714419765777 ['ENST00000378898.8_1_15:100603866-100879329:-|nuORF', 'ENSG00000140470|ENST00000268070|ADAMTS17'] 20061 21687 ENEDVFVLI True PC9_epitope_Rep1 1076.5389910178399 1076.5378899358602 88.247 2 -0.16750327422242067 0.03913159499847514 0.9438714419765777 ['nc|ENSG00000135541|Q8N157-3|AHI1'] 12201 19614 DINLILALS True PC9_epitope_Rep6 970.5698972233 970.5693449679301 88.106 1 -0.16757007883195163 0.03916523727844483 0.9438714419765777 ['ENST00000502604.5_2_5:68550491-68551353:+|nuORF'] 94596 15972 RYKLYQEMF True PC9_epitope_Rep2 1276.6274291827597 1276.62577490379 66.69 3 -0.16757438027240762 0.03916523727844483 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 99341 14399 SLDRQLTGL True PC9_epitope_Rep1 1001.55055876105 1001.54946993586 60.21 2 -0.16758263040195304 0.03916523727844483 0.9438714419765777 ['ENSG00000168434|ENST00000307149|COG7'] 66109 5169 LSNSCWSKP True NCI_RA007_Epitope_Rep3 1020.4698659121999 1020.46876993586 27.324 2 -0.16758338125490546 0.03916523727844483 0.9438714419765777 ['ENSG00000118496|ENST00000237281|FBXO30'] 100860 20078 SLSFDPLLI True PC9_epitope_Rep6 1003.5589981864299 1003.55790993586 89.906 2 -0.16761031383734765 0.03916523727844483 0.9438714419765777 ['ENST00000506951.5_1_4:20711306-20720453:+|nuORF', 'nc|ENSG00000163138|Q8N7B6-2|PACRGL', 'ENSG00000163138|ENST00000503585|PACRGL'] 126920 9309 VPVDTGVAA True PC9_epitope_Rep4 827.4388830537498 827.43778993586 43.413 2 -0.16763346336478605 0.03916523727844483 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 13392 10165 DNIQTVKRLRT True PC9_epitope_Rep1 1342.7680965192199 1342.76644490379 43.975 3 -0.16771751843072202 0.03922166530083284 0.9438714419765777 77584 7342 NYTARFSRF True NCI_RA007_Epitope_Rep3 1160.57269118796 1160.5710449037902 36.004 3 -0.16773610160360247 0.039237732253454026 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 16906 4250 EGARAPQSI True PC9_epitope_Rep6 927.47739382079 927.47628993586 23.345 2 -0.16775193498543156 0.039237732253454026 0.9438714419765777 ['ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A', 'ENST00000475339.1_1_2:220085171-220086945:-|nuORF'] 72503 13768 MVAPAVASV True PC9_epitope_Rep6 843.4524249429099 843.45187496793 64.761 1 -0.16776982109110672 0.039237732253454026 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 97581 20555 SGYPGLLNGV True PC9_epitope_Rep3 975.5025459394699 975.50144993586 84.328 2 -0.16779860035012759 0.039237732253454026 0.9438714419765777 ['ENSG00000140006|ENST00000620954|WDR89'] 34855 8260 GQVGGQVSV True PC9_epitope_Rep4 829.42938099921 829.42883496793 39.233 1 -0.16785096823184226 0.03927509718728562 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 140307 13872 YYDPKHVIF True PC9_epitope_Rep4 1180.59169529704 1180.5900449037902 61.26 3 -0.1678542725050757 0.039291158536585366 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 42350 5540 IELRGAAAA True H1975_Epitope_Rep2 870.4923156089399 870.49120993586 26.317 2 -0.16788465606889294 0.039291158536585366 0.9438714419765777 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 11177 10466 DEIAATCTINE True H1975_Epitope_Rep1 1178.51251856982 1178.5114299358602 45.212 2 -0.16790251083690408 0.039291158536585366 0.9438714419765777 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 482 4298 AAPAAAAAAA True PC9_epitope_Rep4 754.3973525949399 754.3962499358599 22.946 2 -0.16792009489113258 0.039291158536585366 0.9438714419765777 ['ENSG00000131668|ENST00000253968|BARX1', 'ENST00000525718.5_1_11:832961-833994:+|nuORF', 'ENST00000530155.5_1_11:832961-836303:+|nuORF', 'ENST00000280481.8_1_13:39261339-39261684:+|nuORF', 'nc|ENSG00000169181|Q6UXU4-3|GSG1L', 'ENSG00000169181|ENST00000447459|GSG1L'] 115353 13357 TVEFRRTDV True PC9_epitope_Rep2 1121.58292151849 1121.58182993586 56.651 2 -0.16793840055619796 0.03930871536907892 0.9438714419765777 ['ENST00000474430.5_1_1:155151285-155154671:+|nuORF', 'ENST00000468878.1_1_1:155151285-155156663:+|nuORF', 'nc|ENSG00000163462|Q7Z4K8-2|TRIM46', 'nc|ENSG00000163462|Q7Z4K8-5|TRIM46', 'ENSG00000163462|ENST00000334634|TRIM46'] 27310 6162 FM[Oxidation]C[Carbamidomethyl]QGGDFTR True H1975_Epitope_Rep3 1233.4906786696397 1233.48958993586 28.714 2 -0.16797436899620896 0.03930871536907892 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000289549|F5H284|PPIAL4D', 'ENSG00000279782|ENST00000581138|PPIAL4F', 'ENSG00000271567|ENST00000581164|PPIAL4E', 'ENST00000428093.1_1_2:68352508-68352655:+|nuORF', 'nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C', 'ENSG00000270339|ENST00000584068|PPIAL4H', 'ENSG00000263353|ENST00000577856|PPIAL4A'] 98473 9153 SIKQSPLSV True PC9_epitope_Rep3 957.5494961318899 957.54838993586 40.148 2 -0.16807505040905896 0.0393460739668083 0.9438714419765777 ['WHSC1-LETM1|1|fusion', 'nc|ENSG00000109685|O96028-7|NSD2', 'ENSG00000109685|ENST00000508803|NSD2', 'nc|ENSG00000109685|O96028-6|NSD2', 'ENST00000508355.5_1_4:1902372-1920392:+|nuORF', 'nc|ENSG00000109685|O96028-5|NSD2', 'nc|ENSG00000109685|O96028-3|NSD2'] 113270 9976 TQFGGKRPFGV True PC9_epitope_Rep4 1192.63529144452 1192.6336349037902 46.033 3 -0.16809685895938442 0.039383431140919134 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 99379 12786 SLDYYNTCEYP True PC9_epitope_Rep1 1366.53873331766 1366.5376299358602 54.056 2 -0.16816008548207992 0.039400232438508584 0.9438714419765777 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 117276 2534 VAAAESHPL True PC9_epitope_Rep6 893.46068112749 893.45958993586 14.683 2 -0.16818936465545226 0.039400232438508584 0.9438714419765777 ['ENST00000416120.1_1_6:64259201-64259360:-|nuORF', 'ENST00000489392.1_1_9:136216448-136216496:+|nuORF'] 77659 4333 PAAAAAAAAA True PC9_epitope_Rep4 754.3973525949399 754.39680496793 23.094 1 -0.16819300131955742 0.039400232438508584 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000257359.6_1_11:130297588-130298293:-|nuORF', 'ENST00000370272.8_1_1:93811487-93811679:+|nuORF', 'ENST00000280665.10_1_12:2062308-2062389:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ZIC2|p.S454T|1|0.33|ENSG00000043355|chr13:99985443-99985443|T/A|missense_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 28432 11071 FSEENSALEY True H1975_Epitope_Rep2 1187.4982484046698 1187.49767496793 47.617 1 -0.16823799010993784 0.03941703181558392 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 72281 13678 MSDTTFKAL True PC9_epitope_Rep1 1012.48993265044 1012.4888299358599 57.466 2 -0.16826232070154395 0.03941703181558392 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF', 'CTTNBP2NL-CAPZA1|1|fusion'] 137998 18846 YQAPDIDVQL True PC9_epitope_Rep6 1160.57135377528 1160.57077496793 85.137 1 -0.1682628483897326 0.03941703181558392 0.9438714419765777 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF', 'ENSG00000105373|ENST00000246802|NOP53'] 59321 4172 LGIHEDSTNR True PC9_epitope_Rep5 1140.5523496662001 1140.5506949037901 21.121 3 -0.16838165353535126 0.039471177658399054 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 23560 17860 EYAKTFGYTF True PC9_epitope_Rep4 1225.5655401188499 1225.56444993586 76.739 2 -0.16838390456804395 0.039471177658399054 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 59728 7929 LGVGWRRG True NCI_RA007_Epitope_Rep1 899.5089687325899 899.50786993586 34.835 2 -0.1684087113367564 0.039471177658399054 0.9438714419765777 ['ENST00000544365.5_1_1:53373489-53379588:-|nuORF'] 78424 6704 PAYQQISRER True PC9_epitope_Rep1 1246.64183337694 1246.64017490379 30.591 3 -0.1684354104296545 0.039471177658399054 0.9438714419765777 ['ENST00000421312.5_1_7:56099644-56119024:-|nuORF', 'ENST00000419984.6_1_7:56101084-56118851:-|nuORF', 'ENST00000395471.7_1_7:56099644-56118857:-|nuORF'] 69112 16516 LVKVCYSWESY True H1975_Epitope_Rep1 1375.6482241969898 1375.6471299358602 68.902 2 -0.16847331141835956 0.03948947518811315 0.9438714419765777 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF'] 66479 6115 LSRSPGLAV True PC9_epitope_Rep2 898.5236157372199 898.52250993586 28.914 2 -0.16857577737126755 0.03950250461878369 0.9438714419765777 ['ENST00000510733.1_1_4:155665168-155665375:+|nuORF'] 30089 20163 FYPAIADLF True NCI_RA007_Epitope_Rep3 1055.5327834385898 1055.5316899358602 87.862 2 -0.1686415835187845 0.03950250461878369 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 68646 18897 LVAPPLPAA True PC9_epitope_Rep5 847.51673945163 847.51619496793 77.707 1 -0.16865742083699478 0.03950250461878369 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 130278 7804 VTTATTDP True PC9_epitope_Rep3 804.3865131277199 804.38540993586 35.01 2 -0.16874164517463916 0.03950250461878369 0.9438714419765777 ['ENSG00000166987|ENST00000355673|MBD6'] 24536 18227 FALASHLIEA True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 78.181 2 -0.1687580592492292 0.03950250461878369 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 88368 4993 QYNPHVHQL True PC9_epitope_Rep2 1134.55704112382 1134.55540490379 24.577 3 -0.16877869244402557 0.03950250461878369 0.9438714419765777 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 140275 14097 YYAEVETRI True PC9_epitope_Rep3 1142.5607890915799 1142.5596899358602 59.309 2 -0.16880087996143794 0.03950250461878369 0.9438714419765777 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 55740 9310 LDDSFLDTLVP True H1975_Epitope_Rep2 1233.61288423409 1233.61178993586 40.77 2 -0.16880415873035853 0.03950250461878369 0.9438714419765777 ['DSG1|p.G752V|1|0.34|ENSG00000134760|chr18:31354451-31354451|G/T|missense_variant'] 67008 10141 LTAIWMMCWRK True H1975_Epitope_Rep1 1437.70833943909 1437.70724993586 43.946 2 -0.1689520694648263 0.03955889075118086 0.9438714419765777 ['ENST00000532433.5_1_1:212965321-212969949:+|nuORF', 'ENST00000366974.8_1_1:212965321-212970536:+|nuORF'] 82042 9838 PSVCVPVSCR True PC9_epitope_Rep1 1045.5048715219298 1045.5037699358602 42.703 2 -0.16902814124539825 0.03957718312541663 0.9438714419765777 ['ENSG00000205439|ENST00000397907|KRTAP12-3'] 30498 13764 GAGTVLLL True H1975_Epitope_Rep2 742.45889022234 742.4583449679301 58.088 1 -0.16906706987241812 0.039593966633655824 0.9438714419765777 ['nc|ENSG00000204475|O14931-6|NCR3', 'nc|ENSG00000204475|O14931-5|NCR3', 'nc|ENSG00000204475|O14931-4|NCR3', 'nc|ENSG00000204475|O14931-3|NCR3', 'nc|ENSG00000204475|O14931-2|NCR3', 'ENSG00000204475|ENST00000340027|NCR3'] 42971 18538 IGAGLSVVS True PC9_epitope_Rep5 801.4596184983301 801.4590749679301 76.329 1 -0.16907135701397302 0.039593966633655824 0.9438714419765777 ['nc|ENSG00000164124|Q7Z5S9-2|TMEM144', 'ENSG00000164124|ENST00000296529|TMEM144'] 22674 7526 ETTDGTLVT True H1975_Epitope_Rep3 935.44475627983 935.44364993586 33.93 2 -0.16909086846219373 0.039593966633655824 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 53528 16698 KVPEWVDTV True PC9_epitope_Rep2 1071.5600608155898 1071.5589699358602 69.477 2 -0.1692134053756523 0.03964959055418016 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 26999 19931 FLLFPDMEA True NCI_RA007_Epitope_Rep3 1081.5154191222898 1081.5143299358601 86.867 2 -0.169252116642053 0.03964959055418016 0.9438714419765777 ['nc|ENSG00000173369|P02746|C1QB', 'ENSG00000173369|ENST00000509305|C1QB'] 35225 9776 GSHSMRYFF True H1975_Epitope_Rep2 1130.4967493663798 1130.4951149037902 42.591 3 -0.169259703181864 0.03966712370505789 0.9438714419765777 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000496081.5_1_6:29910330-29912419:+|nuORF', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 91635 13796 RPFGGLIRDV True PC9_epitope_Rep4 1128.64037682496 1128.63874490379 60.963 3 -0.1692598744208102 0.03966712370505789 0.9438714419765777 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 71817 17625 MPAGLIAGA True PC9_epitope_Rep3 799.42621019507 799.42510993586 72.985 2 -0.16931880755468803 0.039722740602505996 0.9438714419765777 ['ENST00000466421.5_1_6:10723434-10730896:+|nuORF', 'ENSG00000111843|ENST00000229563|TMEM14C'] 7122 7355 AQYEEIAQR True PC9_epitope_Rep3 1106.5356369728997 1106.53452993586 33.3 2 -0.1693391359510058 0.039722740602505996 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'KRT6C|p.R349Q|1|0.16|ENSG00000170465|chr12:52471163-52471163|C/T|missense_variant', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'ENSG00000170477|ENST00000551956|KRT4', 'CON__P19013'] 30639 15219 GALEPHINAQI True PC9_epitope_Rep3 1161.61422164677 1161.6131299358601 63.687 2 -0.16942259366772475 0.03974026963211212 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 83997 3877 QEMMSQIKYKK True NCI_RA007_Epitope_Rep2 1412.7155925641598 1412.71393490379 19.716 3 -0.1694992431080037 0.03974026963211212 0.9438714419765777 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 72054 15611 MRAFADAL True PC9_epitope_Rep5 893.4429228883698 893.44237496793 65.059 1 -0.16953014830605767 0.03975704030922143 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 31173 9106 GDFC[Carbamidomethyl]IQVGR True H1975_Epitope_Rep1 1050.49166426537 1050.49056993586 39.93 2 -0.16953505099163246 0.03975704030922143 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'ENST00000511355.5_1_17:49238508-49238634:+|nuORF', 'NMT1-NME1|1|fusion'] 34339 10157 GPSGLLTYT True H1975_Epitope_Rep1 907.4650978015901 907.46400993586 44.008 2 -0.169556825255517 0.03975704030922143 0.9438714419765777 ['CYB5R1|p.K238Nfs*34|1|0.14|ENSG00000159348|chr1:202963096-202963097|GC/-|frameshift_variant', 'ENSG00000159348|ENST00000367249|CYB5R1'] 119715 4533 VETFGGLK True NCI_RA007_Epitope_Rep3 849.4596184983299 849.45852993586 24.698 2 -0.1695923824442624 0.039775323686214774 0.9438714419765777 ['ENSG00000206384|ENST00000358511|COL6A6', 'nc|ENSG00000206384|A6NMZ7-2|COL6A6', 'COL6A6|p.T1544Hfs*49|1|0.17|ENSG00000206384|chr3:130599777-130599777|C/-|frameshift_variant'] 135671 5970 YEGPPDDEA True H1975_Epitope_Rep2 991.3770706428298 991.37596993586 27.943 2 -0.16962167411657772 0.039788303381053915 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000598182.5_1_19:3980752-3982305:-|nuORF'] 74929 14644 NLSTAVPSL True PC9_epitope_Rep4 900.4916469026 900.49109496793 64.257 1 -0.16965048979424732 0.039788303381053915 0.9438714419765777 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1'] 11970 9918 DHTSVGIL True PC9_epitope_Rep4 840.4341320264799 840.43302993586 45.802 2 -0.16965407674913074 0.039788303381053915 0.9438714419765777 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1-MLLT3|1|fusion', 'NBEAL1|p.R1792Gfs*10|1|0.22|ENSG00000144426|chr2:203149143-203149143|T/-|frameshift_variant'] 41286 17322 IAGPGLPDL True PC9_epitope_Rep6 851.47526856247 851.47416993586 79.242 2 -0.16966169299822692 0.039788303381053915 0.9438714419765777 ['nc|ENSG00000284922|Q8WZ04-2|TOMT', 'nc|ENSG00000284922|Q8WZ04|TOMT'] 74844 15962 NLQEAEEWYK True PC9_epitope_Rep3 1308.59863115228 1308.5975299358602 66.544 2 -0.16970772673097836 0.039788303381053915 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 76664 19480 NTIVTVYNV True PC9_epitope_Rep1 1021.54441075145 1021.54330993586 79.747 2 -0.16974124190015236 0.039788303381053915 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 63446 14519 LPGVAGAVG True PC9_epitope_Rep4 739.42283906679 739.42229496793 63.762 1 -0.1697444439949774 0.039788303381053915 0.9438714419765777 ['ENSG00000164692|ENST00000297268|COL1A2'] 14559 19122 DVEDWKLTLIT True H1975_Epitope_Rep1 1331.6972825643898 1331.69618993586 79.695 2 -0.16975032293193762 0.039788303381053915 0.9438714419765777 ['nc|ENSG00000123146|P48960-2|ADGRE5', 'nc|ENSG00000123146|P48960-3|ADGRE5', 'ENSG00000123146|ENST00000242786|ADGRE5'] 46377 11005 ITIADC[Carbamidomethyl]GQLE True H1975_Epitope_Rep3 1118.5277749905702 1118.52727496793 47.419 1 -0.16978533235644944 0.039805825242718446 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 57221 20175 LEEYNEML True PC9_epitope_Rep5 1039.45321278855 1039.45210993586 82.651 2 -0.16983362760371265 0.039805825242718446 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 57729 6080 LENLSTASS True H1975_Epitope_Rep3 920.4450906330001 920.44454496793 28.399 1 -0.17015075385276385 0.039881212998039255 0.9438714419765777 ['nc|ENSG00000075391|Q9UJF2|RASAL2', 'ENSG00000075391|ENST00000367649|RASAL2'] 83184 9928 PYVNNVPHL True NCI_RA007_Epitope_Rep4 1051.54507945779 1051.54398993586 45.032 2 -0.17017738210059113 0.03989873032189291 0.9438714419765777 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 25288 6758 FEEAAGAAP True H1975_Epitope_Rep2 861.3868474808897 861.38574993586 30.909 2 -0.1702159586557105 0.03989873032189291 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'TBL2|p.G324V|2|0.18|ENSG00000106638|chr7:73570880-73570880|C/A|missense_variant'] 17425 5137 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 27.469 3 -0.17026353172716266 0.039917006129363844 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 111950 15889 TLSCSVTGV True PC9_epitope_Rep5 865.42151873745 865.4204299358599 66.107 2 -0.1702824365202745 0.039935281241077376 0.9438714419765777 ['ENST00000540139.5_3_11:61120480-61121493:-|nuORF'] 5834 5346 APGGFVHSA True PC9_epitope_Rep2 841.40825163181 841.40714993586 25.95 2 -0.1703814643462086 0.039971829377391174 0.9438714419765777 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 60093 14413 LHSYFAERL True PC9_epitope_Rep1 1134.5821932425 1134.58054490379 60.262 3 -0.17038774448891678 0.039971829377391174 0.9438714419765777 ['nc|ENSG00000276850|P13928-3|ANXA8', 'nc|ENSG00000264230|Q5VT79-2|ANXA8L1', 'ENSG00000265190|ENST00000585281|ANXA8', 'ENSG00000264230|ENST00000619162|ANXA8L1'] 109676 6213 THEEAVAAM True PC9_epitope_Rep3 957.4225813666098 957.42148993586 28.938 2 -0.17046479828663572 0.03998934125126097 0.9438714419765777 ['ENSG00000169813|ENST00000682386|HNRNPF'] 140348 5934 YYEHVKARF True PC9_epitope_Rep2 1211.60874234351 1211.60710490379 28.215 3 -0.17046545273987784 0.03998934125126097 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 105038 6044 STIPPELVKQK True NCI_RA007_Epitope_Rep3 1238.72343774258 1238.7217949037902 30.753 3 -0.17055619300855127 0.04002512275893571 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 61695 16001 LLIDDKGTIKL True PC9_epitope_Rep6 1227.74383883399 1227.74218490379 73.861 3 -0.17057259162479232 0.04002512275893571 0.9438714419765777 ['ENSG00000170312|ENST00000395284|CDK1', 'chr10:60778668-60780141|493|10.05|0.53|4.25|+|ENST00000448257|CDK1,CDK1'] 31587 8332 GEFSKEWAA True NCI_RA007_Epitope_Rep3 1023.4661604307498 1023.46506993586 39.889 2 -0.1705814300106425 0.04002512275893571 0.9438714419765777 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1'] 87731 8504 QVEQQIQK True H1975_Epitope_Rep1 999.5349086969098 999.53437496793 37.641 1 -0.17061327236225796 0.04004034483414848 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 44354 19919 IMPKTGFLI True PC9_epitope_Rep1 1018.5885244928999 1018.58742993586 81.436 2 -0.17062819293497372 0.04004034483414848 0.9438714419765777 ['ENSG00000198681|ENST00000356661|MAGEA1', 'ENSG00000197172|ENST00000329342|MAGEA6'] 113843 12619 TREEGTPLTL True PC9_epitope_Rep5 1115.5822528121498 1115.58167496793 53.541 1 -0.17063806856516225 0.04004034483414848 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 23425 16286 EVVRPLVRL True PC9_epitope_Rep3 1079.6815133609498 1079.68040993586 67.781 2 -0.17064446041405368 0.04004034483414848 0.9438714419765777 ['nc|ENSG00000141161|Q8IWX7-2|UNC45B', 'ENSG00000141161|ENST00000394570|UNC45B', 'nc|ENSG00000141161|Q8IWX7|UNC45B'] 110945 12914 TLCGDLVLG True H1975_Epitope_Rep1 889.45790424617 889.4573549679301 54.747 1 -0.17065646660717912 0.04004034483414848 0.9438714419765777 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 100350 10250 SLNDAGVEL True NCI_RA007_Epitope_Rep1 916.45017601344 916.44906993586 43.881 2 -0.1707895420236366 0.04005708848715509 0.9438714419765777 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 63197 13003 LNVLANVI True NCI_RA007_Epitope_Rep5 854.52255310806 854.52144993586 56.694 2 -0.17085842906015494 0.04005708848715509 0.9438714419765777 ['nc|ENSG00000197444|Q9ULD0-3|OGDHL', 'nc|ENSG00000197444|Q9ULD0-2|OGDHL', 'ENSG00000197444|ENST00000374103|OGDHL', 'nc|ENSG00000105953|Q02218-2|OGDH', 'ENSG00000105953|ENST00000222673|OGDH', 'nc|ENSG00000105953|Q02218-3|OGDH', 'OGDH|p.Q772Rfs*83|1|0.31|ENSG00000105953|chr7:44697736-44697736|G/-|frameshift_variant'] 62630 20377 LLVPLDLKV True PC9_epitope_Rep4 1008.6583183048799 1008.65722993586 86.526 2 -0.17088785126986086 0.04005708848715509 0.9438714419765777 ['CON__Q0VBK2'] 108738 13369 TENCDFLFSP True H1975_Epitope_Rep2 1171.4855755459898 1171.48446993586 56.556 2 -0.17094705590805703 0.040075355369070045 0.9438714419765777 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 58326 8738 LETRRPSYL True PC9_epitope_Rep4 1133.61930702721 1133.61820993586 41.116 2 -0.1710410398391251 0.04011265032729487 0.9438714419765777 ['ENSG00000154319|ENST00000284486|FAM167A', 'FAM167A|p.Q79Rfs*7|1|0.23|ENSG00000154319|chr8:11444178-11444178|C/-|frameshift_variant'] 116222 21381 TVTSVLTSV True PC9_epitope_Rep5 905.50696261357 905.50586993586 87.303 2 -0.17111415231691177 0.04014994386619222 0.9438714419765777 ['ENSG00000106689|ENST00000373615|LHX2'] 108227 4816 TEAGAGAVAAA True H1975_Epitope_Rep1 887.4348603024698 887.43431496793 23.6 1 -0.17122245081291962 0.04016667935154882 0.9438714419765777 ['ENST00000409443.6_1_2:172016940-172017408:-|nuORF'] 78038 5248 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 25.575 2 -0.17126315812352993 0.04016667935154882 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 9484 17193 AVYGPELYAA True PC9_epitope_Rep6 1052.51786165044 1052.51676993586 78.721 2 -0.17127314727707038 0.04016667935154882 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000100320|O43251-4|RBFOX2', 'nc|ENSG00000100320|O43251-9|RBFOX2'] 82059 7425 PSVPVRAP True PC9_epitope_Rep2 821.47593726881 821.47484993586 33.936 2 -0.17136148579062813 0.04020320407930286 0.9438714419765777 ['ENST00000353258.7_1_16:19533228-19533372:-|nuORF'] 85055 18342 QILEHLDNL True PC9_epitope_Rep5 1093.57677350889 1093.57566993586 75.567 2 -0.17136942228766472 0.04020320407930286 0.9438714419765777 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 26740 14666 FLDGNEMTL True NCI_RA007_Epitope_Rep3 1038.46919720586 1038.46867496793 65.067 1 -0.17141452344663377 0.040221465400787686 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 113398 16233 TQLIDKLEER True PC9_epitope_Rep2 1243.67721582615 1243.67610993586 67.685 2 -0.17154858325733982 0.040277011472384466 0.9438714419765777 ['ENSG00000149679|ENST00000279101|CABLES2'] 129505 11859 VTFEQAIEP True H1975_Epitope_Rep3 1032.5127762699997 1032.51166993586 50.763 2 -0.1715604947045792 0.040277011472384466 0.9438714419765777 ['MYEF2|p.A286P|1|0.05|ENSG00000104177|chr15:48158784-48158784|C/G|missense_variant'] 7115 5513 AQYEDIAQKS True PC9_epitope_Rep6 1151.5458673034298 1151.5447699358601 29.191 2 -0.17163225390115225 0.04029527034739926 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1'] 84962 7594 QIC[Carbamidomethyl]MDGALDP True H1975_Epitope_Rep3 1118.4736312427299 1118.4725299358602 34.191 2 -0.17169045602799918 0.04033255331697201 0.9438714419765777 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'ENST00000374161.7_3_10:50011336-50031259:+|nuORF'] 113051 15566 TPVLSELP True H1975_Epitope_Rep1 854.4749342093 854.4743849679301 65.156 1 -0.1717374945739481 0.04035081044060574 0.9438714419765777 ['ENSG00000106624|ENST00000223357|AEBP1', 'nc|ENSG00000106624|Q8IUX7-2|AEBP1', 'AEBP1|p.V515E|1|0.12|ENSG00000106624|chr7:44110971-44110971|T/A|missense_variant'] 27593 10341 FPSAAATAA True PC9_epitope_Rep1 805.39701824177 805.39592993586 44.659 2 -0.1718618984726671 0.04042613906591839 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 135239 12290 YAYDGKDYLA True PC9_epitope_Rep4 1177.5291546101298 1177.52804993586 55.09 2 -0.17196260453899687 0.04044362432704929 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G'] 138489 4005 YRGYVASL True PC9_epitope_Rep6 927.4814165720699 927.48030993586 22.193 2 -0.1719884368011506 0.04044362432704929 0.9438714419765777 ['ENSG00000160785|ENST00000359511|SLC25A44'] 19875 12332 ELVRRNVEL True PC9_epitope_Rep2 1126.64585612822 1126.64422490379 52.747 3 -0.17200701637304758 0.04046187794856186 0.9438714419765777 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 36764 11063 GVPEGLGSL True PC9_epitope_Rep4 827.4388830537499 827.43778993586 50.33 2 -0.1720194625784728 0.04047628105147031 0.9438714419765777 ['ENST00000525377.6_1_16:3115656-3117396:+|nuORF'] 91341 18911 RMKYYELI True PC9_epitope_Rep4 1114.58450174162 1114.5839749679299 80.827 1 -0.17203046709194258 0.04047628105147031 0.9438714419765777 ['ENSG00000099381|ENST00000262519|SETD1A'] 105015 3295 STIGPEGVHQK True NCI_RA007_Epitope_Rep5 1151.5934862021898 1151.5918349037902 18.197 3 -0.1720336005875364 0.04047628105147031 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 112979 15695 TPSPIISP True PC9_epitope_Rep1 810.4487194614601 810.4481749679301 65.193 1 -0.17203379193834129 0.04047628105147031 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17'] 69658 15636 LVVTHTIAL True PC9_epitope_Rep4 965.5909670210499 965.58986993586 68.069 2 -0.17203804350654853 0.04047628105147031 0.9438714419765777 ['ENST00000533632.5_1_11:118889218-118889467:+|nuORF'] 101819 14454 SPIFAGVV True NCI_RA007_Epitope_Rep4 788.4432401581998 788.44269496793 62.95 1 -0.1720695619469133 0.04047628105147031 0.9438714419765777 ['ENST00000520515.5_1_5:133541561-133657575:-|nuORF', 'nc|ENSG00000273345|Q8IVW4-2|CDKL3', 'ENSG00000006837|ENST00000265334|CDKL3'] 58508 6684 LFAAGAEK True NCI_RA007_Epitope_Rep1 805.43340375049 805.43230993586 30.01 2 -0.17212070698398116 0.04049453162149311 0.9438714419765777 ['ENSG00000090863|ENST00000422840|GLG1', 'nc|ENSG00000090863|Q92896-3|GLG1', 'nc|ENSG00000090863|Q92896-2|GLG1'] 114262 17417 TSAESFVNV True PC9_epitope_Rep3 952.45017601344 952.44962496793 72.165 1 -0.17216197877697464 0.04051124044277074 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 92592 13595 RRDRIVVVL True PC9_epitope_Rep1 1124.71421047156 1124.71255490379 57.148 3 -0.17216561528079033 0.04051124044277074 0.9438714419765777 ['ENSG00000141580|ENST00000392325|WDR45B', 'ENST00000583470.1_1_17:30439049-30439436:-|nuORF'] 110094 16410 TIAEVKRRLSP True H1975_Epitope_Rep2 1268.75646920636 1268.75536993586 68.342 2 -0.17221117205907766 0.04051124044277074 0.9438714419765777 ['ENSG00000008197|ENST00000008391|TFAP2D'] 115990 9900 TVQQYQVP True PC9_epitope_Rep2 961.4868958753299 961.48578993586 43.412 2 -0.17225303904973224 0.04052948895947051 0.9438714419765777 ['CFAP61|p.G772V|1|0.32|ENSG00000089101|chr20:20251750-20251750|G/T|missense_variant'] 54899 13926 LAGPAELL True H1975_Epitope_Rep3 782.4538048418999 782.4532549679301 58.88 1 -0.17227945916177406 0.04058114327007188 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 106208 17993 SVPNKDVFQEL True PC9_epitope_Rep1 1274.65066672514 1274.6495699358602 74.002 2 -0.17231262976376405 0.04058114327007188 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 28588 17595 FSPDGQYLVTG True PC9_epitope_Rep4 1182.55570371114 1182.55460993586 75.693 2 -0.1723188979416177 0.04058114327007188 0.9438714419765777 ['ENSG00000122692|ENST00000397149|SMU1', 'nc|ENSG00000122692|Q2TAY7-2|SMU1'] 123427 11926 VIDWHNYGY True H1975_Epitope_Rep3 1165.51925863277 1165.5181699358602 51.027 2 -0.1723290772365227 0.04058114327007188 0.9438714419765777 ['nc|ENSG00000033011|Q9BT22-2|ALG1', 'ENSG00000033011|ENST00000262374|ALG1', 'ALG1-SEC14L5|1|fusion'] 135693 8301 YEIGHTWHP True H1975_Epitope_Rep2 1138.5195929859399 1138.51795490379 36.882 3 -0.1723628589999029 0.04058114327007188 0.9438714419765777 ['ENST00000529023.5_1_11:86749009-86868454:+|nuORF', 'nc|ENSG00000166575|Q86UB9-2|TMEM135', 'ENSG00000166575|ENST00000305494|TMEM135'] 95271 12039 SADRGLVL True PC9_epitope_Rep3 829.46576650793 829.46466993586 51.344 2 -0.17238662380128203 0.04058114327007188 0.9438714419765777 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-7|FCAR'] 5609 14901 APAAHSDAVL True PC9_epitope_Rep3 950.4821448480599 950.48104993586 62.452 2 -0.1723908520565448 0.04058114327007188 0.9438714419765777 ['nc|ENSG00000115839|Q15042-4|RAB3GAP1', 'ENSG00000115839|ENST00000264158|RAB3GAP1', 'nc|ENSG00000115839|Q15042-3|RAB3GAP1'] 32194 3227 GFEDLERGRRE True NCI_RA007_Epitope_Rep2 1362.6640253734997 1362.66238490379 17.207 3 -0.172496244084374 0.04059938768136612 0.9438714419765777 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A', 'nc|ENSG00000137474|Q13402-3|MYO7A', 'nc|ENSG00000137474|Q13402-4|MYO7A'] 132787 11517 VYSQIPAAVKL True NCI_RA007_Epitope_Rep5 1187.6914093383098 1187.6903099358601 50.95 2 -0.1725593200050069 0.04061685903896252 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 125406 8196 VLTGAEPAPA True H1975_Epitope_Rep1 924.4916469025999 924.49054993586 36.466 2 -0.17258488240926032 0.04061685903896252 0.9438714419765777 ['ENST00000590137.1_1_17:74141562-74142388:+|nuORF'] 130860 17517 VVGGIYGV True PC9_epitope_Rep5 762.42759009406 762.4270449679301 72.384 1 -0.17261009155095675 0.040654116752234265 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 101560 12625 SPAVIVGLLK True H1975_Epitope_Rep1 995.6379172134699 995.63682993586 53.612 2 -0.17264612864315249 0.040688278353455655 0.9438714419765777 ['ENSG00000092621|ENST00000641023|PHGDH', 'ENST00000482968.1_1_1:120282927-120286660:+|nuORF'] 58518 11683 LFAGAEAEA True H1975_Epitope_Rep2 877.41814760917 877.4175949679301 50.011 1 -0.17265470923926246 0.040688278353455655 0.9438714419765777 ['ENSG00000166126|ENST00000299155|AMN', 'ENST00000541086.5_1_14:103389974-103397014:+|nuORF'] 44686 19456 IPNIAPDI True PC9_epitope_Rep1 851.47526856247 851.47416993586 79.654 2 -0.17280058001751783 0.040688278353455655 0.9438714419765777 ['ZNF292-ORC3|2|fusion', 'ZNF292-ORC3|1|fusion', 'nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 95705 9232 SAYGGPVGA True PC9_epitope_Rep5 777.3657181134898 777.36516496793 40.457 1 -0.17280299107817698 0.040688278353455655 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7'] 56832 8376 LEDDARVI True PC9_epitope_Rep1 929.4818104948899 929.48070993586 37.054 2 -0.17283085800144904 0.040688278353455655 0.9438714419765777 ['nc|ENSG00000150756|Q6P4H8-2|ATPSCKMT', 'ENSG00000150756|ENST00000511437|ATPSCKMT'] 121190 14787 VGGLGVAVV True PC9_epitope_Rep6 769.46978925921 769.4692449679301 68.844 1 -0.17285151696022014 0.04072320766554497 0.9438714419765777 ['nc|ENSG00000157593|Q8TB61-5|SLC35B2', 'nc|ENSG00000157593|Q8TB61-4|SLC35B2', 'nc|ENSG00000157593|Q8TB61-3|SLC35B2', 'nc|ENSG00000157593|Q8TB61-2|SLC35B2', 'ENSG00000157593|ENST00000393812|SLC35B2'] 100659 6861 SLQTNEAP True PC9_epitope_Rep2 858.4083112014599 858.40720993586 31.794 2 -0.17285283534428994 0.04072320766554497 0.9438714419765777 ['nc|ENSG00000130821|P48029-2|SLC6A8'] 41509 15421 IDALDPAYAP True PC9_epitope_Rep2 1044.51277627 1044.51166993586 64.596 2 -0.17293370195949823 0.04072320766554497 0.9438714419765777 ['ENSG00000116771|ENST00000375826|AGMAT'] 18173 20959 EIQDLEESFV True PC9_epitope_Rep1 1207.56084866123 1207.55974993586 85.442 2 -0.17296554976374787 0.04072320766554497 0.9438714419765777 ['ENSG00000182768|ENST00000379095|NGRN', 'ENST00000561573.1_1_15:90806992-90815017:+|nuORF'] 26916 19031 FLGSFLYEY True H1975_Epitope_Rep3 1137.5382627418498 1137.53767496793 79.801 1 -0.17304126949777207 0.040741444866920155 0.9438714419765777 ['CON__P02769'] 75170 11171 NNLIEGIG True H1975_Epitope_Rep1 828.4341320264799 828.43302993586 47.937 2 -0.1732555882862682 0.040797703465713576 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 63477 13556 LPHGFTNMA True PC9_epitope_Rep5 986.4643866089401 986.46328993586 57.166 2 -0.1732771593807346 0.040815938557469296 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 101757 5890 SPHPGLVAA True PC9_epitope_Rep4 847.4552018242299 847.45410993586 29.554 2 -0.17330402779308732 0.040853183278520236 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300'] 60436 11100 LILCFQRM True PC9_epitope_Rep6 1022.54052875466 1022.5394299358601 53.623 2 -0.17339316813297576 0.04086675536970158 0.9438714419765777 ['ENST00000464491.5_1_2:172180771-172182690:-|nuORF'] 43124 13655 IGNTLLIDQRL True NCI_RA007_Epitope_Rep1 1254.72958575218 1254.7284899358601 57.127 2 -0.17340011529218805 0.04086675536970158 0.9438714419765777 ['SERPINA12|p.F139L|1|0.13|ENSG00000165953|chr14:94497981-94497981|G/T|missense_variant'] 80799 10376 PLSSSSLEIP True H1975_Epitope_Rep1 1028.5389910178399 1028.5378899358602 44.861 2 -0.17340995159932365 0.04086675536970158 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'ENST00000487397.1_1_3:180327676-180328522:+|nuORF'] 17831 16287 EIAGYILE True NCI_RA007_Epitope_Rep4 906.4698488288599 906.46930496793 70.635 1 -0.1734163739727398 0.04086675536970158 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 13542 11859 DPIYSYDRR True PC9_epitope_Rep1 1183.56218607391 1183.56108993586 50.48 2 -0.17343086917955747 0.04086675536970158 0.9438714419765777 ['ENSG00000198691|ENST00000370225|ABCA4'] 132727 13265 VYSHFNETL True PC9_epitope_Rep1 1108.5189242796 1108.5178299358602 55.889 2 -0.17344669850418984 0.04086675536970158 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 6208 12372 APRAALVFA True PC9_epitope_Rep6 914.5337864980999 914.53268993586 58.993 2 -0.17345843022885873 0.04086675536970158 0.9438714419765777 ['ENSG00000170006|ENST00000304385|TMEM154'] 63901 20623 LPVSPSLLPV True PC9_epitope_Rep1 1020.62193279616 1020.62082993586 84.145 2 -0.17357432303201217 0.04089932911416462 0.9438714419765777 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 77267 8235 NYIPVKNGKQF True PC9_epitope_Rep2 1306.70337100434 1306.70173490379 37.032 3 -0.17360421826311923 0.04089932911416462 0.9438714419765777 ['ENSG00000095951|ENST00000379388|HIVEP1', 'HIVEP1|p.E539Kfs*3|1|0.36|ENSG00000095951|chr6:12121410-12121410|G/-|frameshift_variant'] 33237 8496 GLAEVAAAV True H1975_Epitope_Rep2 799.4439684341899 799.44341496793 37.634 1 -0.17364416535328767 0.04089932911416462 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 95216 6089 SAAPGAEAKY True H1975_Epitope_Rep3 963.46616043075 963.46506993586 28.434 2 -0.17368208984142036 0.04089932911416462 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 44748 11398 IPRTGVSEYPP True H1975_Epitope_Rep2 1214.6295373577398 1214.62844993586 48.893 2 -0.17371279759676309 0.04089932911416462 0.9438714419765777 ['nc|ENSG00000186628|A1L4K1-2|FSD2', 'ENSG00000186628|ENST00000334574|FSD2'] 78332 11596 PASTTTPGL True PC9_epitope_Rep1 843.43379767331 843.43270993586 49.481 2 -0.17376277108321905 0.04089932911416462 0.9438714419765777 ['ENSG00000205277|ENST00000536621|MUC12', 'nc|ENSG00000205277|Q9UKN1|MUC12'] 77798 19388 PAEPAFLA True PC9_epitope_Rep1 814.4225047136199 814.4219549679301 79.387 1 -0.1737906108913759 0.04089932911416462 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 28882 15672 FTDVNKIYL True PC9_epitope_Rep6 1111.5913609438699 1111.59026993586 72.492 2 -0.17386912985444372 0.04093656163290129 0.9438714419765777 ['ENSG00000101337|ENST00000398022|TM9SF4', 'TM9SF4-HM13|8|fusion', 'TM9SF4-HM13|7|fusion', 'TM9SF4-HM13|2|fusion', 'TM9SF4-HM13|9|fusion', 'TM9SF4-HM13|1|fusion', 'TM9SF4-HM13|3|fusion'] 5265 17674 ALREFWAL True PC9_epitope_Rep4 1004.5443511817998 1004.54324993586 76.008 2 -0.17393274437937925 0.04099201824401368 0.9438714419765777 ['ENSG00000175087|ENST00000374269|PDIK1L'] 58351 10843 LEVDPPVAA True H1975_Epitope_Rep2 909.4807478657299 909.4801949679301 46.736 1 -0.17394091055573965 0.04099201824401368 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 42039 6780 IEDYMREWRTK True H1975_Epitope_Rep1 1525.73474778561 1525.73311490379 31.123 3 -0.17397907895371956 0.041007125890736344 0.9438714419765777 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9'] 55454 10238 LATVTVRP True PC9_epitope_Rep3 855.5178020807899 855.51670993586 44.331 2 -0.17400261456294058 0.041007125890736344 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 105324 8444 [Acetylation]-STVHEILC[Carbamidomethyl]K True H1975_Epitope_Rep1 1127.56449516876 1127.5633899358602 37.408 2 -0.1740457297275746 0.041007125890736344 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 112855 6170 TPNGNSLSA True PC9_epitope_Rep1 859.40356017419 859.4030149679301 28.548 1 -0.17406997373159994 0.041007125890736344 0.9438714419765777 ['PHGDH-HMGCS2|1|fusion', 'ENSG00000092621|ENST00000641023|PHGDH'] 91388 6840 RNAGDEVTI True PC9_epitope_Rep1 973.48287312405 973.48176993586 31.116 2 -0.1740997745762982 0.041007125890736344 0.9438714419765777 ['SNTG2|p.V152F|1|0.22|ENSG00000172554|chr2:1165590-1165590|G/T|missense_variant', 'SNTG2|p.W268Cfs*12|2|0.89|ENSG00000172554|chr2:1237971-1237971|G/-|frameshift_variant', 'ENSG00000172554|ENST00000308624|SNTG2'] 9183 20938 AVPDLYFENA True PC9_epitope_Rep1 1137.53423999057 1137.5331499358601 85.359 2 -0.17412725494306336 0.04102534868696082 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 31004 7858 GATTTTTAV True PC9_epitope_Rep5 821.41306222873 821.41196993586 35.169 2 -0.17423862709557034 0.04106023180695421 0.9438714419765777 ['ENSG00000178828|ENST00000375121|RNF186'] 83832 3586 QEFQRAQAA True NCI_RA007_Epitope_Rep4 1047.5097565782296 1047.5086499358601 19.832 2 -0.1742525537815469 0.04106023180695421 0.9438714419765777 ['ENSG00000204220|ENST00000374606|PFDN6', 'ENST00000395134.3_1_6:33258469-33258619:+|nuORF'] 89926 14008 RFVEKYTEL True PC9_epitope_Rep3 1183.62372370131 1183.62208490379 58.963 3 -0.1742595940083913 0.04106023180695421 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 110119 16113 TIAQLVHAV True PC9_epitope_Rep4 950.5549158654999 950.55380993586 69.916 2 -0.1742846457850587 0.04106023180695421 0.9438714419765777 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 118934 18982 VEERNLLSV True PC9_epitope_Rep5 1057.57677350889 1057.57566993586 78.04 2 -0.17429682911527494 0.041078451862970496 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 31710 10323 GEIPKVLVA True NCI_RA007_Epitope_Rep4 924.5644179200399 924.56332993586 46.563 2 -0.17434321251622764 0.0410958904109589 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'AP2A2-PSMD13|2|fusion', 'AP2A2-PSMD13|3|fusion', 'AP2A2-PSMD13|1|fusion', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 8326 19774 ATLPAVVTV True PC9_epitope_Rep2 869.52221875489 869.52167496793 81.447 1 -0.1743528430175096 0.0410958904109589 0.9438714419765777 ['ENST00000580601.5_1_17:73689468-73702598:+|nuORF', 'nc|ENSG00000161526|Q9UHR5-2|SAP30BP', 'ENSG00000161526|ENST00000584667|SAP30BP', 'ENST00000579005.1_1_17:73702284-73702598:+|nuORF', 'ENST00000584557.1_1_17:73702349-73702598:+|nuORF', 'ENST00000580322.5_1_17:73702024-73702598:+|nuORF', 'ENST00000293208.13_1_17:73701692-73702598:+|nuORF', 'ENST00000583329.5_1_17:73699767-73702598:+|nuORF', 'ENST00000578756.5_1_17:73699860-73702598:+|nuORF'] 57171 7337 LEERTPPVP True H1975_Epitope_Rep3 1036.5553097883198 1036.5542099358602 33.198 2 -0.17445202027001652 0.041114108750997455 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 137298 19258 YLGPTLFL True H1975_Epitope_Rep1 922.5164050984599 922.5158549679301 80.238 1 -0.17459169580785067 0.04114976157455782 0.9438714419765777 ['ENST00000462381.1_1_7:73151257-73151715:-|nuORF', 'nc|ENSG00000106077|Q8NFV4-6|ABHD11', 'nc|ENSG00000106077|Q8NFV4-4|ABHD11', 'ENSG00000106077|ENST00000222800|ABHD11'] 32665 17215 GHLYTVPI True PC9_epitope_Rep1 898.4912529797799 898.49014993586 71.035 2 -0.174676001272365 0.04114976157455782 0.9438714419765777 ['ENSG00000105974|ENST00000341049|CAV1', 'ENST00000489856.1_1_7:116165116-116166890:+|nuORF', 'CAV1|p.E20K|2|0.17|ENSG00000105974|chr7:116526552-116526552|G/A|missense_variant'] 56084 8133 LDLGSGVK True PC9_epitope_Rep3 787.44396843419 787.44286993586 36.261 2 -0.17468188533325357 0.04114976157455782 0.9438714419765777 ['ENST00000494039.1_X:52241120-52243863:+|nuORF', 'ENSG00000204382|ENST00000375616|XAGE1B', 'ENSG00000204379|ENST00000375602|XAGE1A', 'chrX:52515573-52520709|116|11.71|0.09|6.96|-|ENST00000518075|XAGE1B,XAGE1B'] 82098 9605 PTAEGLAAA True PC9_epitope_Rep5 799.4075829254699 799.40648993586 41.907 2 -0.17479876508380798 0.041167977506744176 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 6033 12484 APLRLIAA True PC9_epitope_Rep4 823.5279728416699 823.52686993586 55.826 2 -0.1748526762736257 0.0411861927468227 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant', 'MDN1|p.G347Sfs*36|2|0.35|ENSG00000112159|chr6:89790201-89790219|AGGAGGCTTTGTTCTACCT/-|frameshift_variant'] 110679 8309 TIYCNVEPS True H1975_Epitope_Rep3 1024.4535471417198 1024.4524499358602 36.945 2 -0.17488036171255122 0.04122027201580427 0.9438714419765777 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 63861 8980 LPTTNSGVSA True PC9_epitope_Rep5 945.47672511445 945.4761749679301 39.485 1 -0.17490647951448812 0.04122027201580427 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 69635 17138 LVVDWDHHL True PC9_epitope_Rep3 1132.56654317836 1132.56490490379 71.079 3 -0.17493336095471868 0.04122027201580427 0.9438714419765777 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 109443 15178 TGSFYQSL True PC9_epitope_Rep4 901.4181476091699 901.41704993586 66.307 2 -0.17495830113219665 0.04122027201580427 0.9438714419765777 ['ENST00000584706.1_1_18:678488-685971:-|nuORF'] 87970 10785 QVRDVIIAA True PC9_epitope_Rep4 983.5763795860698 983.5758349679301 49.243 1 -0.17497911073662303 0.04122027201580427 0.9438714419765777 ['ENSG00000176485|ENST00000415826|PLAAT3', 'ENST00000394613.3_1_11:63342419-63381578:-|nuORF'] 68163 16477 LTPSPVTVTV True PC9_epitope_Rep3 1012.5804619070001 1012.57936993586 68.516 2 -0.17498645351871672 0.041238484186532434 0.9438714419765777 ['ENST00000496425.1_1_20:62373927-62374363:+|nuORF'] 56171 7392 LDNPERWNKVK True H1975_Epitope_Rep1 1397.74154741821 1397.7399149037901 33.437 3 -0.17501442590795485 0.041253561253561256 0.9438714419765777 ['ENSG00000179918|ENST00000478753|SEPHS2'] 20534 16971 EQAAWYHTL True PC9_epitope_Rep3 1117.51925863277 1117.5181699358602 70.439 2 -0.1750367952414466 0.041253561253561256 0.9438714419765777 ['ENSG00000170915|ENST00000442253|PAQR8'] 119009 11040 VEFSIDSVA True H1975_Epitope_Rep1 965.4705771048499 965.46948993586 47.428 2 -0.17504806839119005 0.041253561253561256 0.9438714419765777 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000412120.2_1_1:1853728-1858343:-|nuORF', 'ENST00000464311.5_1_1:1853728-1858229:-|nuORF'] 106454 18812 SVVDGTPLV True PC9_epitope_Rep5 885.48074786573 885.47964993586 77.373 2 -0.1750631704410345 0.041253561253561256 0.9438714419765777 ['C10orf76-MGEA5|1|fusion', 'C10orf76-MGEA5|2|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA'] 17421 4815 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 26.009 3 -0.17506619799660963 0.041253561253561256 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 12237 18169 DIQQLYGGL True PC9_epitope_Rep6 1005.51311062317 1005.51200993586 82.529 2 -0.17518641354223305 0.04127177071660557 0.9438714419765777 ['ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3'] 140296 11913 YYDKHFTEF True PC9_epitope_Rep4 1248.54513902744 1248.54349490379 53.604 3 -0.1752682649991434 0.041384156648244165 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 71822 17322 MPAGSFITA True PC9_epitope_Rep4 893.43168949833 893.4311449679301 74.636 1 -0.17526858328824338 0.041384156648244165 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 55510 16727 LAVVAGVAAE True PC9_epitope_Rep1 898.5123823471799 898.51128993586 69.168 2 -0.1752811997195705 0.04140236259353516 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 10806 15834 DAFEHIVTQF True NCI_RA007_Epitope_Rep1 1205.57168812845 1205.5705899358602 65.689 2 -0.17534772013625796 0.04143719852633978 0.9438714419765777 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF'] 27694 9423 FQDGTKATF True PC9_epitope_Rep3 1013.4818104948899 1013.48070993586 41.181 2 -0.17539187278604398 0.04143719852633978 0.9438714419765777 ['ENSG00000110711|ENST00000279146|AIP'] 26743 15222 FLDGNEMTL True NCI_RA007_Epitope_Rep5 1038.46919720586 1038.46867496793 65.234 1 -0.17539901078595044 0.04143719852633978 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 126162 20056 VPFPTPLEA True PC9_epitope_Rep4 969.5171333744498 969.51602993586 85.284 2 -0.1754059178486833 0.04143719852633978 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 33241 7778 GLAEVAAAV True NCI_RA007_Epitope_Rep3 799.4439684341899 799.44286993586 37.719 2 -0.17540762658575507 0.041454614508165594 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 131617 17720 VVYQDGFYGA True PC9_epitope_Rep2 1117.50802524273 1117.5069299358602 73.441 2 -0.17544572690045898 0.041454614508165594 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 72729 12933 MYSDVWKQL True NCI_RA007_Epitope_Rep3 1168.5586809166 1168.55758993586 58.142 2 -0.17549928350580046 0.04147202916714139 0.9438714419765777 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1'] 52259 5720 KNLQTVNVDEN True PC9_epitope_Rep4 1272.6309939097198 1272.62988993586 28.823 2 -0.17550268722496074 0.04147202916714139 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 132600 10795 VYPPPHQVF True PC9_epitope_Rep6 1082.5549158654999 1082.55380993586 52.361 2 -0.1755921526975326 0.041487866935024494 0.9438714419765777 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG', 'ENST00000540158.1_1_12:109535484-109537104:+|nuORF', 'UNG|p.G152Dfs*39|1|0.23|ENSG00000076248|chr12:109101919-109101919|G/-|frameshift_variant'] 131645 21790 VWFPDMMPTW True NCI_RA007_Epitope_Rep5 1308.5671374253197 1308.5660299358601 90.942 2 -0.17559658499233097 0.041487866935024494 0.9438714419765777 ['ENSG00000005812|ENST00000355619|FBXL3'] 115686 16479 TVLDIHDNQL True PC9_epitope_Rep1 1166.59315184902 1166.5920499358601 68.212 2 -0.17560741294476986 0.041487866935024494 0.9438714419765777 ['LRRC40|p.L310Gfs*8|1|0.16|ENSG00000066557|chr1:70175854-70175860|TAGTAGT/-|frameshift_variant', 'ENSG00000066557|ENST00000370952|LRRC40'] 100974 11471 SLSSVVTVPS True NCI_RA007_Epitope_Rep4 974.52842633414 974.5278749679301 51.056 1 -0.17561938225180324 0.041487866935024494 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 111730 10039 TLQALQIPAAK True H1975_Epitope_Rep3 1152.6866583110398 1152.68556993586 43.651 2 -0.1756486676812662 0.04150606641730115 0.9438714419765777 ['ENSG00000140575|ENST00000268182|IQGAP1', 'IQGAP1|p.P711Qfs*22|1|0.49|ENSG00000140575|chr15:90467544-90467544|T/-|frameshift_variant'] 71009 8273 MEQVKVQIA True H1975_Epitope_Rep2 1044.5637662970398 1044.5626699358602 36.774 2 -0.175692647275843 0.041520323505401246 0.9438714419765777 ['ENSG00000099800|ENST00000215570|TIMM13'] 66990 21572 LTAEDLFEA True PC9_epitope_Rep5 1007.4811417885498 1007.48004993586 88.016 2 -0.17572001084788808 0.041520323505401246 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 84883 14234 QHRRWRLHCLK True PC9_epitope_Rep2 1531.8418876795097 1531.84024490379 60.017 3 -0.17572038994484998 0.041520323505401246 0.9438714419765777 ['ENSG00000120254|ENST00000367321|MTHFD1L'] 73496 10532 NEYRKRFMLKP True PC9_epitope_Rep3 1480.7972884725195 1480.7956349037902 45.451 3 -0.17574899555500462 0.041520323505401246 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 12209 9599 DIPAKGPNI True NCI_RA007_Epitope_Rep1 923.5076313199099 923.50652993586 41.335 2 -0.17578176308970014 0.041520323505401246 0.9438714419765777 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000465134.5_1_2:74650023-74652276:+|nuORF', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF'] 107227 21698 SYPNVFLVF True PC9_epitope_Rep6 1084.5593325396 1084.55822993586 96.348 2 -0.17584902413503167 0.041520323505401246 0.9438714419765777 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 69310 14373 LVPPDQPEV True PC9_epitope_Rep2 992.51786165044 992.51676993586 60.547 2 -0.17588634492397584 0.0415369428202597 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 107593 3092 TAFYWCLRKRR True NCI_RA007_Epitope_Rep1 1498.7979571788599 1498.79632490379 15.913 3 -0.17594989066784142 0.0415369428202597 0.9438714419765777 ['nc|ENSG00000101384|P78504-2|JAG1', 'ENSG00000101384|ENST00000254958|JAG1'] 11729 4783 DHHDNTYTV True PC9_epitope_Rep5 1100.45230127176 1100.45120993586 23.442 2 -0.17597532320659104 0.0415369428202597 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 105913 23149 SVLDLVVAL True PC9_epitope_Rep4 927.56408356687 927.5635349679301 97.263 1 -0.17601116078330506 0.041551982688255724 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12', 'ENST00000479481.5_1_10:99131673-99132940:-|nuORF'] 11978 20227 DHTVGFIL True PC9_epitope_Rep5 900.4705175351999 900.4699649679301 82.85 1 -0.17603522773097308 0.041551982688255724 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 18122 9014 EILTPNSIPK True H1975_Epitope_Rep1 1110.62847472858 1110.62736993586 39.576 2 -0.17610156110592737 0.041551982688255724 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 31391 5237 GEASPPAPP True NCI_RA007_Epitope_Rep5 821.3919328613299 821.39082993586 26.841 2 -0.17611473611375641 0.041551982688255724 0.9438714419765777 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 24041 15777 EYQDLLNVK True PC9_epitope_Rep3 1120.5764391557198 1120.57534993586 65.843 2 -0.1761352776609554 0.041551982688255724 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'NEFM|p.A393S|1|0.34|ENSG00000104722|chr8:24915701-24915701|G/T|missense_variant', 'INA|p.R377W|1|0.5|ENSG00000148798|chr10:103287098-103287098|C/T|missense_variant', 'nc|ENSG00000131095|P14136-3|GFAP', 'ENSG00000131095|ENST00000588735|GFAP', 'nc|ENSG00000131095|P14136-2|GFAP', 'ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 92872 10934 RRLWWYHWICW True NCI_RA007_Epitope_Rep2 1703.82959166031 1703.82848993586 47.138 2 -0.17626012842989466 0.041588368164303474 0.9438714419765777 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 137829 14728 YPFRLNEA True PC9_epitope_Rep5 1008.5028802926398 1008.50178993586 61.65 2 -0.17630527363211476 0.041588368164303474 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 48824 7435 KERELELQK True PC9_epitope_Rep3 1171.6560864587498 1171.6544549037899 33.604 3 -0.17637624483580913 0.04162238080777406 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 60487 21736 LIMLVLKLD True PC9_epitope_Rep3 1056.66168943316 1056.6605899358601 88.901 2 -0.17638775353376887 0.04162238080777406 0.9438714419765777 ['ENSG00000135211|ENST00000257663|TMEM60'] 126692 5384 VPRPETAVA True PC9_epitope_Rep4 938.5185303567798 938.51742993586 27.439 2 -0.1764118953677457 0.04162238080777406 0.9438714419765777 ['ENST00000480356.1_1_1:95006521-95007279:-|nuORF', 'nc|ENSG00000117525|P13726-2|F3', 'ENSG00000117525|ENST00000334047|F3'] 35934 18505 GVAPGFQVV True PC9_epitope_Rep4 872.4756029156399 872.4750549679301 79.252 1 -0.1764183708510478 0.04162238080777406 0.9438714419765777 ['ENSG00000165724|ENST00000298585|ZMYND19'] 100004 22663 SLITSELIV True PC9_epitope_Rep4 973.56956287013 973.56846993586 95.402 2 -0.17643591825948515 0.04162238080777406 0.9438714419765777 ['ENSG00000137561|ENST00000260116|TTPA'] 92647 16300 RRFMQTFVL True PC9_epitope_Rep6 1196.64883333368 1196.64718490379 75.061 3 -0.17647783820365057 0.04165954943157016 0.9438714419765777 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF'] 137006 4825 YKKRLSVEL True NCI_RA007_Epitope_Rep3 1134.67609362734 1134.6744449037901 25.95 3 -0.17655696495609263 0.04167773771114063 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 115392 9675 TVESEPAG True PC9_epitope_Rep3 788.3552129994399 788.35410993586 42.163 2 -0.17668763511465033 0.04169117786591267 0.9438714419765777 ['nc|ENSG00000101213|Q13882-2|PTK6'] 59262 16243 LGGQLNVSV True PC9_epitope_Rep5 885.4919812557699 885.49088993586 67.468 2 -0.1767349285787018 0.04169117786591267 0.9438714419765777 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1'] 55296 12220 LARIGEIAA True PC9_epitope_Rep5 912.5392658013599 912.53816993586 51.991 2 -0.17673652869998235 0.04169117786591267 0.9438714419765777 ['ENST00000587327.5_1_19:11546705-11546834:+|nuORF'] 77497 12002 NYPSAFHSV True PC9_epitope_Rep3 1020.46649478392 1020.46538993586 51.192 2 -0.1767400379955454 0.04169117786591267 0.9438714419765777 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'ENST00000553293.5_1_14:69522275-69583201:-|nuORF'] 102256 6855 SPTGKEFVSA True PC9_epitope_Rep2 1021.5080252427299 1021.50692993586 31.772 2 -0.17682982882597995 0.04169117786591267 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766642-105766726:+|nuORF'] 15356 19016 EALFQPSFL True NCI_RA007_Epitope_Rep2 1050.53859709502 1050.53750993586 78.819 2 -0.17684935121019324 0.04169117786591267 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 131979 19239 VYGFQWRHF True PC9_epitope_Rep1 1238.5985120129797 1238.59687490379 78.802 3 -0.17689941166809203 0.04169117786591267 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'ENST00000579128.1_1_18:657682-669175:+|nuORF'] 140287 8790 YYDKHFTEF True NCI_RA007_Epitope_Rep4 1248.54513902744 1248.5440499358601 40.621 2 -0.17695020074445006 0.041747314888610575 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 119935 5802 VEYETYKEA True H1975_Epitope_Rep3 1130.5131701928199 1130.5120699358602 27.341 2 -0.17701885225652528 0.04176470588235294 0.9438714419765777 ['ENSG00000265241|ENST00000583313|RBM8A', 'nc|ENSG00000265241|Q9Y5S9-2|RBM8A', 'ENST00000555532.2_1_14:60864810-60864996:+|nuORF'] 98631 20262 SIPEGALVAV True PC9_epitope_Rep1 954.5385970950199 954.5380449679301 82.768 1 -0.17702309393641147 0.04176470588235294 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant'] 72499 14670 MVAPAVASV True PC9_epitope_Rep4 843.4524249429099 843.45187496793 64.363 1 -0.17709907721038737 0.041782888370239656 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN'] 16075 2767 EEDEKWKMSP True H1975_Epitope_Rep2 1277.55980311541 1277.55814490379 14.672 3 -0.1771091781400087 0.04180107016811506 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 43455 4869 IHSSSTVL True PC9_epitope_Rep2 842.44978209062 842.44868993586 24.096 2 -0.1771845502604182 0.04183822552795856 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 24507 23153 FAISILQQL True PC9_epitope_Rep5 1031.60153170475 1031.6004299358601 94.047 2 -0.177192378520242 0.04185402318477621 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000465032.5_1_3:186501384-186502902:+|nuORF', 'ENST00000465267.5_1_3:186501384-186502902:+|nuORF', 'ENST00000485101.5_1_3:186502728-186502902:+|nuORF'] 129192 5990 VTDGPGNYKY True H1975_Epitope_Rep3 1112.51383889916 1112.51274993586 28.053 2 -0.17720041701356495 0.04185402318477621 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 44859 18542 IQAEEIMKL True PC9_epitope_Rep5 1073.57908200801 1073.5779899358602 76.344 2 -0.1772424593516694 0.04185402318477621 0.9438714419765777 ['ENSG00000125656|ENST00000245816|CLPP'] 115882 15147 TVPCCFGYCSL True PC9_epitope_Rep3 1191.4762738155898 1191.47516993586 63.402 2 -0.17725161991010555 0.04185402318477621 0.9438714419765777 ['chr2:222572022-222586338|111|10.41|0.25|5.35|-|0|TE_info:L1PA5,L1PA5_dup1583,L1,LINE,donor,+,222586338,222590526|FARSB,None|20'] 60051 7024 LHSEVLSP True H1975_Epitope_Rep2 880.46543215476 880.46432993586 31.943 2 -0.17728711728314875 0.04187220156333005 0.9438714419765777 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant', 'REV3L|p.M1011Nfs*5|1|0.26|ENSG00000009413|chr6:111375323-111375324|-/T|frameshift_variant'] 18252 14800 EISPHDLSL True PC9_epitope_Rep1 1009.50802524273 1009.50692993586 61.748 2 -0.17730273652665446 0.04188958451906659 0.9438714419765777 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1'] 129229 24967 VTDLITVGL True PC9_epitope_Rep1 929.54334812229 929.54224993586 100.95 2 -0.1773261928403972 0.04188958451906659 0.9438714419765777 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3'] 58896 6706 LFTSLNSSP True H1975_Epitope_Rep2 964.4865615221601 964.48546993586 30.706 2 -0.17739455299838916 0.041903786326731925 0.9438714419765777 ['nc|ENSG00000184999|Q63ZE4-2|SLC22A10'] 133802 6741 WLRRGWRTRWR True H1975_Epitope_Rep3 1627.9072648173897 1627.90561490379 30.883 3 -0.1774089008825011 0.041903786326731925 0.9438714419765777 ['ENST00000431489.5_1_2:62933068-62933182:+|nuORF'] 35563 14001 GTIGLIHAV True PC9_epitope_Rep4 879.51780208079 879.51670993586 61.762 2 -0.17747245645674967 0.041903786326731925 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 55512 15570 LAVVAGVAAE True PC9_epitope_Rep4 898.5123823471799 898.51128993586 67.81 2 -0.17752683630617835 0.041903786326731925 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 125693 17791 VNAIQPNI True PC9_epitope_Rep4 867.48141657207 867.4808649679301 76.462 1 -0.17758473328647423 0.041903786326731925 0.9438714419765777 ['ENST00000312655.8_1_17:57474537-57474684:+|nuORF'] 82512 18703 PVEVQEVSL True PC9_epitope_Rep5 998.5284263341398 998.5273299358599 76.958 2 -0.17759116734919633 0.041903786326731925 0.9438714419765777 ['nc|ENSG00000141425|Q96P16-3|RPRD1A', 'ENSG00000141425|ENST00000399022|RPRD1A'] 129826 16263 VTLGKEDLSIK True PC9_epitope_Rep3 1201.69180326113 1201.69070993586 67.693 2 -0.1777679870023199 0.04195910315262339 0.9438714419765777 ['ENSG00000067992|ENST00000379162|PDK3', 'nc|ENSG00000067992|Q15120-2|PDK3'] 46336 13255 ITFVAETGP True H1975_Epitope_Rep2 933.4807478657299 933.4801949679301 56.114 1 -0.17778810470004336 0.04195910315262339 0.9438714419765777 ['ENSG00000159495|ENST00000452443|TGM7'] 77592 9448 NYTARFSRF True PC9_epitope_Rep6 1160.57269118796 1160.5710449037902 46.575 3 -0.1778389603224952 0.04199544764795144 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 6205 15013 APRAALVFA True PC9_epitope_Rep3 914.5337864980999 914.53268993586 62.873 2 -0.17789694478557927 0.04199544764795144 0.9438714419765777 ['ENSG00000170006|ENST00000304385|TMEM154'] 63445 15619 LPGVAGAVG True PC9_epitope_Rep1 739.42283906679 739.42229496793 64.898 1 -0.17792219197723022 0.04201361886155422 0.9438714419765777 ['ENSG00000164692|ENST00000297268|COL1A2'] 82434 17267 PVCPPGGIQEV True PC9_epitope_Rep3 1094.5430308524599 1094.54192993586 71.572 2 -0.17801672230104687 0.04204995922083341 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'CON__Q922U2'] 43927 15588 ILEFFGLK True H1975_Epitope_Rep3 965.5586042636098 965.55750993586 65.376 2 -0.17801686147137102 0.04204995922083341 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 97357 15969 SFYPEEVSSI True PC9_epitope_Rep1 1156.52882025696 1156.5277299358602 66.232 2 -0.17807670766515965 0.04206413927819606 0.9438714419765777 ['ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 58 13011 AAAGSPVFL True H1975_Epitope_Rep1 831.44905381463 831.44850496793 55.129 1 -0.17809592325920842 0.04206413927819606 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8', 'ENSG00000141526|ENST00000582743|SLC16A3'] 91840 7303 RPNDSRMLVA True PC9_epitope_Rep1 1157.59752603681 1157.59588490379 32.904 3 -0.17815637332535153 0.04206413927819606 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 40119 8746 HRDLRAANVL True PC9_epitope_Rep1 1163.65233849099 1163.65069490379 38.48 3 -0.17817391612177705 0.04206413927819606 0.9438714419765777 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN'] 65083 16282 LSDLNDELLLK True H1975_Epitope_Rep1 1271.69728256439 1271.69618993586 67.983 2 -0.17824656372436928 0.04206413927819606 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 44917 6545 IQDSRTLP True PC9_epitope_Rep2 928.4977949122 928.49668993586 30.589 2 -0.1782597174111362 0.04206413927819606 0.9438714419765777 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 88803 8771 RDRDRQRERRR True NCI_RA007_Epitope_Rep2 1597.8733984898097 1597.8717449037902 38.764 3 -0.17830532843560848 0.04207831610884612 0.9438714419765777 ['ENSG00000126870|ENST00000407559|DYNC2I1', 'DYNC2I1|p.L508Ffs*8|2|0.37|ENSG00000126870|chr7:158911610-158911611|-/T|frameshift_variant', 'DYNC2I1|p.N527Ifs*23|1|0.41|ENSG00000126870|chr7:158911662-158911662|A/-|frameshift_variant'] 73938 13092 NHKGEVLI True PC9_epitope_Rep1 908.5079656730799 908.50686993586 55.226 2 -0.17832002757694074 0.04207831610884612 0.9438714419765777 ['nc|ENSG00000161203|Q96CW1-2|AP2M1', 'ENSG00000161203|ENST00000292807|AP2M1', 'ENST00000484469.5_1_3:183894781-183895400:+|nuORF', 'ENST00000466598.5_1_3:183894781-183896942:+|nuORF', 'ENST00000487958.5_1_3:183894781-183898060:+|nuORF', 'ENST00000472560.5_1_3:183894781-183898834:+|nuORF'] 60940 12211 LKYRYDTEI True PC9_epitope_Rep2 1199.6186383208699 1199.61700490379 52.281 3 -0.1783553130225151 0.04207831610884612 0.9438714419765777 ['ENSG00000139618|ENST00000380152|BRCA2'] 125204 15072 VLQLGNIVFK True NCI_RA007_Epitope_Rep2 1129.68593003505 1129.68482993586 63.312 2 -0.17835808446602475 0.04207831610884612 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 16514 15640 EENVPIGTLVY True H1975_Epitope_Rep2 1232.6288686514 1232.6277699358602 65.315 2 -0.1783929782913219 0.04207831610884612 0.9438714419765777 ['ENSG00000197410|ENST00000357232|DCHS2'] 52472 6672 KPKVIIVQA True PC9_epitope_Rep2 994.6539016307798 994.65280993586 31.07 2 -0.1784681920749409 0.04207831610884612 0.9438714419765777 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF'] 54158 10395 KYNHDIALL True PC9_epitope_Rep6 1085.58694426977 1085.58584993586 50.717 2 -0.17856650961776965 0.04209648058252427 0.9438714419765777 ['nc|ENSG00000101981|P00740-2|F9', 'ENSG00000101981|ENST00000218099|F9'] 67290 16064 LTDPDIHVL True PC9_epitope_Rep4 1021.5444107514501 1021.54330993586 69.724 2 -0.17861165475694224 0.04213280746330919 0.9438714419765777 ['nc|ENSG00000091157|Q9Y4E6-2|WDR7', 'ENSG00000091157|ENST00000254442|WDR7'] 42508 17067 IERLVSYYY True PC9_epitope_Rep3 1204.61282466444 1204.61172993586 70.8 2 -0.17861324377892912 0.04213280746330919 0.9438714419765777 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-3|HS2ST1'] 105788 18417 SVIGSLNGV True PC9_epitope_Rep1 844.46543215476 844.4648849679301 75.631 1 -0.17868292649623688 0.04216993117048105 0.9438714419765777 ['ENST00000531017.5_1_19:50314409-50316363:-|nuORF', 'nc|ENSG00000010361|Q9BT04-3|FUZ', 'nc|ENSG00000010361|Q9BT04-2|FUZ', 'ENSG00000010361|ENST00000313777|FUZ'] 34166 18831 GPFSAVIT True PC9_epitope_Rep4 790.42250471362 790.4219549679301 80.521 1 -0.17871412724462765 0.04218409327898379 0.9438714419765777 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 110462 15433 TIPEAFRGV True PC9_epitope_Rep5 988.5341804209198 988.5336349679301 64.373 1 -0.1787219445867295 0.04218409327898379 0.9438714419765777 ['ENSG00000213719|ENST00000375784|CLIC1'] 37874 5311 HEAEKFRP True H1975_Epitope_Rep3 1012.5090283022399 1012.50792993586 25.504 2 -0.17872240039531528 0.04218409327898379 0.9438714419765777 ['ENSG00000155875|ENST00000380534|SAXO1'] 28226 13737 FRRRRWRRRME True NCI_RA007_Epitope_Rep1 1703.9491467127098 1703.9475149037899 57.45 3 -0.1787527789145822 0.04218409327898379 0.9438714419765777 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 84572 18104 QHDFTSQIF True PC9_epitope_Rep3 1121.51417325233 1121.5130699358601 74.832 2 -0.17876878367970253 0.04218409327898379 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1'] 89930 13628 RFVEKYTEL True PC9_epitope_Rep5 1183.62372370131 1183.62208490379 57.443 3 -0.17877550955408805 0.04218409327898379 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 7059 5555 AQVHVNGGAL True NCI_RA007_Epitope_Rep5 964.5090283022399 964.50792993586 28.053 2 -0.17883429692741015 0.04220145221529187 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1'] 72119 9769 MRDPTLYRC True PC9_epitope_Rep1 1153.5372342793698 1153.53559490379 42.437 3 -0.17890095830803693 0.04220145221529187 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 42474 12203 IEQSTQPL True PC9_epitope_Rep2 914.4709114580198 914.46980993586 52.25 2 -0.17898943170029036 0.042274881516587676 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant', 'MUC16|p.T2806Lfs*14|1|0.17|ENSG00000181143|chr19:8972724-8972724|G/-|frameshift_variant'] 35233 7473 GSHSMRYFYT True NCI_RA007_Epitope_Rep4 1247.5393424543497 1247.53768490379 35.391 3 -0.17901378283228317 0.042274881516587676 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 123185 16030 VHKCWNGLS True PC9_epitope_Rep5 1042.50183474682 1042.5007299358601 66.648 2 -0.1790172223623549 0.042274881516587676 0.9438714419765777 ['ENST00000415814.6_2_3:17550096-17784135:-|nuORF'] 19037 11691 ELGMIADA True PC9_epitope_Rep4 818.3844049527399 818.38385496793 52.732 1 -0.1790354199906488 0.042289028736067935 0.9438714419765777 ['TKFC|p.I279M|1|0.05|ENSG00000149476|chr11:61342816-61342816|C/G|missense_variant'] 94589 14656 RYKGPGFEYF True PC9_epitope_Rep4 1262.6084079903396 1262.6067749037902 64.306 3 -0.17904767357585893 0.042289028736067935 0.9438714419765777 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 132722 21846 VYSGGVYLF True PC9_epitope_Rep3 1003.5014833103099 1003.50038993586 89.333 2 -0.17908506360932291 0.042289028736067935 0.9438714419765777 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 17404 5367 EHFPNHQQL True PC9_epitope_Rep2 1148.53630567924 1148.53465490379 26.032 3 -0.17910217420718366 0.042289028736067935 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 36788 16676 GVPIRLEVGP True PC9_epitope_Rep5 1035.6076797143498 1035.60658993586 69.147 2 -0.1791089307352298 0.042289028736067935 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 29715 11406 FVPEKNFRV True PC9_epitope_Rep5 1134.61857875122 1134.61693490379 48.87 3 -0.17911482814070148 0.042289028736067935 0.9438714419765777 ['THRAP3|p.T757Nfs*6|1|0.26|ENSG00000054118|chr1:36296730-36296731|-/A|frameshift_variant', 'ENSG00000054118|ENST00000354618|THRAP3'] 78044 6155 PALPPQAH True PC9_epitope_Rep3 829.44463714053 829.44354993586 28.72 2 -0.17913128218771057 0.042306380075059706 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 77449 11271 NYNNQSSNFGP True PC9_epitope_Rep1 1240.51087877704 1240.50978993586 48.234 2 -0.17917814106036836 0.042306380075059706 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF'] 118860 4569 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 22.696 2 -0.1793171765075431 0.04232052156773558 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 30637 15125 GALEPHINAQI True PC9_epitope_Rep1 1161.61422164677 1161.6131299358601 62.998 2 -0.1793194560105262 0.04232052156773558 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 1736 13822 AEGSGPLLYL True H1975_Epitope_Rep2 1018.5335117145801 1018.53240993586 58.314 2 -0.17938928256011438 0.04232052156773558 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 139342 4109 YTDSSYEEKKY True H1975_Epitope_Rep2 1411.61434078607 1411.61324993586 20.898 2 -0.17944766221446418 0.04232052156773558 0.9438714419765777 ['nc|ENSG00000168765|Q03013-3|GSTM4', 'nc|ENSG00000168765|Q03013-2|GSTM4', 'ENSG00000168765|ENST00000369836|GSTM4', 'ENST00000490171.1_1_1:110230495-110231001:+|nuORF', 'ENST00000461767.5_1_1:110198981-110199949:+|nuORF', 'ENST00000568786.1_1_1:110210737-110211998:+|nuORF', 'ENST00000481656.2_1_1:110210707-110211256:+|nuORF', 'ENST00000369833.5_1_1:110198981-110199543:+|nuORF', 'ENST00000464206.5_1_1:110210707-110211992:+|nuORF', 'ENST00000464733.5_1_1:110198981-110200115:+|nuORF', 'nc|ENSG00000134184|P09488-2|GSTM1', 'nc|ENSG00000213366|P28161-2|GSTM2', 'ENSG00000213366|ENST00000241337|GSTM2', 'ENSG00000134184|ENST00000309851|GSTM1', 'ENST00000476040.6_1_1:110210707-110212286:+|nuORF', 'ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 47791 8049 IYQRHVYNL True PC9_epitope_Rep2 1204.6352914445197 1204.6336349037902 36.321 3 -0.17946095893671626 0.04232052156773558 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 18823 12835 ELEDTFLQAQP True H1975_Epitope_Rep2 1289.61394686325 1289.6128499358601 54.479 2 -0.1794625134688907 0.04232052156773558 0.9438714419765777 ['ENSG00000185002|ENST00000332958|RFX6'] 18663 3342 ELCFIHHWRER True NCI_RA007_Epitope_Rep1 1524.7408362255599 1524.73918490379 16.894 3 -0.17953816116248686 0.042336264402668286 0.9438714419765777 ['nc|ENSG00000291004|A6NC78|GOLGA8IP', 'ENSG00000179938|ENST00000567927|GOLGA8J'] 42191 7426 IEGEAAEDGDP True NCI_RA007_Epitope_Rep1 1101.4462128318098 1101.44510993586 32.883 2 -0.1795818494698892 0.042336264402668286 0.9438714419765777 ['ENSG00000243156|ENST00000441493|MICAL3'] 124415 17136 VLEHLNAIV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 73.919 2 -0.17962840625403548 0.042336264402668286 0.9438714419765777 ['ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.V747Gfs*14|1|0.2|ENSG00000121871|chr3:165188591-165188592|-/C|frameshift_variant'] 30642 14934 GALEPHINAQI True PC9_epitope_Rep5 1161.61422164677 1161.6131299358601 62.448 2 -0.17965020208135143 0.042336264402668286 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 132239 11936 VYKTIMEQF True NCI_RA007_Epitope_Rep5 1157.57908200801 1157.5779899358602 52.568 2 -0.17971919535264755 0.042391510327837785 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 77941 10917 PAKFKMKYWGV True PC9_epitope_Rep1 1353.7267493012098 1353.72511490379 46.878 3 -0.17972374646251502 0.042391510327837785 0.9438714419765777 ['ENSG00000138207|ENST00000371464|RBP4'] 64158 13608 LQFDKAINA True PC9_epitope_Rep5 1018.5447451046199 1018.54364993586 57.365 2 -0.1797859905963082 0.042407245992344716 0.9438714419765777 ['ENSG00000140307|ENST00000396060|GTF2A2'] 89124 8021 REFLWQEGHSA True NCI_RA007_Epitope_Rep3 1358.6367479965002 1358.63509490379 38.643 3 -0.17979912043298008 0.042407245992344716 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 107217 8723 SYPDNHQEF True PC9_epitope_Rep5 1135.45705229903 1135.4559499358602 38.495 2 -0.1798137726032349 0.042407245992344716 0.9438714419765777 ['ENSG00000169967|ENST00000682094|MAP3K2'] 77503 10536 NYQGHFHLF True NCI_RA007_Epitope_Rep5 1161.5355774032498 1161.53392490379 47.16 3 -0.17983160787956518 0.042407245992344716 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 5900 10528 APGYSYTAA True PC9_epitope_Rep1 899.4024975450299 899.40194496793 45.386 1 -0.1798578441734058 0.04242137173171656 0.9438714419765777 ['ENSG00000172115|ENST00000305786|CYCS'] 25220 9946 FEAPATINSA True H1975_Epitope_Rep2 1019.49237517859 1019.49187496793 43.246 1 -0.17990472430823679 0.04242137173171656 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP', 'ENST00000536737.1_1_12:16050816-16050996:+|nuORF'] 100382 14924 SLNLYENQV True PC9_epitope_Rep1 1078.5294889633 1078.52838993586 62.227 2 -0.17991797068844362 0.04242137173171656 0.9438714419765777 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 116399 17543 TWFTAGAKLLF True NCI_RA007_Epitope_Rep3 1253.68084465461 1253.6797499358602 76.971 2 -0.17994190673670787 0.04242137173171656 0.9438714419765777 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'STAT2|p.L535Ifs*6|1|0.33|ENSG00000170581|chr12:56348778-56348779|-/T|frameshift_variant'] 18203 16102 EIRATFLQT True PC9_epitope_Rep5 1077.5818588893299 1077.5807699358602 66.925 2 -0.17997571807550092 0.04242137173171656 0.9438714419765777 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-2|ZZEF1'] 24435 13032 FAGM[Oxidation]PITL True H1975_Epitope_Rep1 864.44152628648 864.4409749679301 55.212 1 -0.1800208252551831 0.04242137173171656 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 128536 5501 VSGVCVCK True NCI_RA007_Epitope_Rep2 793.3826311309299 793.38152993586 26.016 2 -0.1800961604832028 0.04245685163783794 0.9438714419765777 ['nc|ENSG00000163453|Q16270-2|IGFBP7', 'ENSG00000163453|ENST00000295666|IGFBP7', 'IGFBP7-SPINK2|1|fusion'] 61952 21434 LLLPASLTGG True PC9_epitope_Rep1 940.5593325396 940.55822993586 87.285 2 -0.18010289971821342 0.04245685163783794 0.9438714419765777 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9', 'ENST00000550793.1_1_12:58087944-58089649:+|nuORF', 'OS9|p.Y175Wfs*9|1|0.31|ENSG00000135506|chr12:57696317-57696318|TA/-|frameshift_variant', 'ENST00000549897.1_1_12:58087944-58088778:+|nuORF', 'ENST00000553208.5_1_12:58087944-58109621:+|nuORF'] 102851 6174 SQGQPPPAV True PC9_epitope_Rep5 879.4450310633499 879.44392993586 28.732 2 -0.18011642339635553 0.04245685163783794 0.9438714419765777 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB'] 15911 6838 EDRKDVVV True H1975_Epitope_Rep2 958.5083595958998 958.50726993586 31.218 2 -0.18017152939903397 0.04249313251870797 0.9438714419765777 ['nc|ENSG00000239732|Q9NR96-4|TLR9', 'nc|ENSG00000239732|Q9NR96-2|TLR9', 'nc|ENSG00000239732|Q9NR96-5|TLR9', 'ENSG00000239732|ENST00000360658|TLR9', 'nc|ENSG00000239732|Q9NR96-3|TLR9'] 2111 15837 AELQPLFAD True H1975_Epitope_Rep2 1002.5022115862998 1002.50110993586 66.109 2 -0.1802828663893128 0.04249313251870797 0.9438714419765777 ['ENSG00000179044|ENST00000314586|EXOC3L1'] 5375 7179 ALTSSVIS True NCI_RA007_Epitope_Rep2 776.42798401688 776.42743496793 32.546 1 -0.18035672993628238 0.04252941065034952 0.9438714419765777 ['ENST00000358932.8_1_14:20784504-20793722:-|nuORF', 'ENST00000398169.7_1_14:20784507-20786020:-|nuORF'] 32840 6706 GIGTVPVGR True NCI_RA007_Epitope_Rep2 854.4974009893798 854.49630993586 30.697 2 -0.1803581406915826 0.04252941065034952 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 100009 13075 SLIYTWTTTN True H1975_Epitope_Rep3 1198.5870038394198 1198.5859099358602 55.535 2 -0.18046110023537892 0.04256246093232057 0.9438714419765777 ['ENST00000376414.4_1_13:99948343-99959645:-|nuORF'] 64102 13267 LQEDPPVGV True PC9_epitope_Rep4 952.4865615221598 952.48601496793 58.929 1 -0.18051191819628512 0.04256246093232057 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 78660 13733 PEALEAQV True PC9_epitope_Rep4 855.4337976733099 855.43324496793 60.722 1 -0.18052442100891672 0.04256246093232057 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 63501 19465 LPISVAASI True PC9_epitope_Rep1 869.52221875489 869.52167496793 79.689 1 -0.18059936496939485 0.04256246093232057 0.9438714419765777 ['ENSG00000178401|ENST00000549441|DNAJC22'] 65085 16280 LSDLNDELLLK True H1975_Epitope_Rep3 1271.69728256439 1271.69618993586 68.088 2 -0.18059984583513555 0.04256246093232057 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 88931 6303 REDEISPPPP True H1975_Epitope_Rep2 1135.5509526838698 1135.5503749679299 29.18 1 -0.18062711767194065 0.04256246093232057 0.9438714419765777 ['ENSG00000108946|ENST00000589228|PRKAR1A', 'nc|ENSG00000108946|P10644-2|PRKAR1A'] 86092 13570 QPQLPYSQA True PC9_epitope_Rep2 1030.5083595959 1030.5072699358602 57.49 2 -0.18076124636648705 0.04259953782626814 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 53774 16096 KYFEKQFEL True PC9_epitope_Rep5 1230.6284747285797 1230.62736993586 66.901 2 -0.18077836075667228 0.04261363636363636 0.9438714419765777 ['ENSG00000147687|ENST00000276692|TATDN1', 'ENST00000521973.5_1_8:125516164-125531109:-|nuORF', 'nc|ENSG00000147687|Q6P1N9-2|TATDN1'] 71889 5937 MPNGTPHPTAA True PC9_epitope_Rep3 1092.50222866964 1092.50112993586 27.895 2 -0.18080208065866504 0.04261363636363636 0.9438714419765777 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI'] 24486 16691 FAIPLIEKL True H1975_Epitope_Rep1 1042.64266824074 1042.6415699358602 69.599 2 -0.1808430741288845 0.04261363636363636 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 32377 9909 GGETLDQVKMR True NCI_RA007_Epitope_Rep1 1232.6183210510399 1232.61722993586 42.547 2 -0.18084484796798458 0.04261363636363636 0.9438714419765777 ['ENSG00000078237|ENST00000179259|TIGAR'] 41251 18652 IAEQYESYYDY True H1975_Epitope_Rep2 1442.58779168506 1442.58668993586 77.413 2 -0.18085302032620737 0.04261363636363636 0.9438714419765777 ['nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'DOCK4|p.K1934Qfs*18|1|0.1|ENSG00000128512|chr7:111728375-111728376|-/G|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4'] 46669 10186 ITVNDLPVGR True NCI_RA007_Epitope_Rep1 1082.6084079903399 1082.60730993586 43.632 2 -0.18085930739890363 0.04261363636363636 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 103772 13126 SRFPEALRL True PC9_epitope_Rep6 1087.61382772395 1087.6127299358602 62.122 2 -0.18095438261498004 0.042649899625014205 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 106329 6579 SVSDGIHSV True PC9_epitope_Rep4 899.4348603024702 899.43376993586 32.462 2 -0.1809807741718525 0.042649899625014205 0.9438714419765777 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 96210 11810 SEEKVVTY True H1975_Epitope_Rep2 953.47057710485 953.46948993586 50.503 2 -0.18101031362285092 0.04266722218013787 0.9438714419765777 ['ENSG00000068383|ENST00000368594|INPP5A'] 73993 5238 NHQGGSVQL True PC9_epitope_Rep5 938.4569927293799 938.45588993586 25.163 2 -0.18103713852380773 0.04266722218013787 0.9438714419765777 ['ENSG00000183742|ENST00000400331|MACC1'] 33339 20231 GLDSQFVEV True PC9_epitope_Rep5 992.4814761417199 992.48092496793 82.866 1 -0.1810794419635972 0.04271756418995683 0.9438714419765777 ['ENSG00000131389|ENST00000622186|SLC6A6'] 65084 16193 LSDLNDELLLK True H1975_Epitope_Rep3 1271.69728256439 1271.69618993586 67.743 2 -0.18109910501081422 0.04271756418995683 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 57722 8596 LENLIIKQGEQ True H1975_Epitope_Rep3 1283.7085159544301 1283.7074099358601 38.055 2 -0.18110128135025294 0.04271756418995683 0.9438714419765777 ['nc|ENSG00000172673|Q8N1K5-3|THEMIS', 'nc|ENSG00000172673|Q8N1K5-2|THEMIS', 'ENSG00000172673|ENST00000368248|THEMIS', 'nc|ENSG00000172673|Q8N1K5-4|THEMIS'] 17907 15478 EIDQELVIP True H1975_Epitope_Rep2 1054.55464108198 1054.55354993586 64.692 2 -0.18115060103273462 0.04271756418995683 0.9438714419765777 ['ENSG00000101544|ENST00000262198|ADNP2'] 96963 10374 SEVEVIHVP True NCI_RA007_Epitope_Rep4 1007.52876068731 1007.52766993586 46.76 2 -0.18116815572067235 0.04271756418995683 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 100593 8405 SLQGEQELP True H1975_Epitope_Rep2 999.4872897981498 999.48618993586 37.283 2 -0.1811753221219138 0.04271756418995683 0.9438714419765777 ['ENST00000435221.6_1_1:2487266-2487602:+|nuORF'] 94624 16222 RYLDGWNAIF True NCI_RA007_Epitope_Rep3 1253.61930702721 1253.61820993586 71.499 2 -0.18119483103191944 0.04271756418995683 0.9438714419765777 ['ENST00000466602.1_1_2:219677084-219677513:+|nuORF', 'ENST00000494263.5_1_2:219646839-219678911:+|nuORF', 'ENSG00000135929|ENST00000258415|CYP27A1'] 86862 9055 QRQRFRFEFEK True NCI_RA007_Epitope_Rep1 1569.8164436939694 1569.81478490379 39.225 3 -0.18121264842109797 0.04271756418995683 0.9438714419765777 ['TRIM58|p.L184F|1|0.08|ENSG00000162722|chr1:247864740-247864740|G/C|missense_variant'] 5989 22036 APLDAYFQV True PC9_epitope_Rep1 1022.50729696674 1022.5061899358601 89.576 2 -0.18122538827648646 0.04273488090279093 0.9438714419765777 ['ENSG00000168411|ENST00000361070|RFWD3', 'RFWD3|p.C424Afs*36|1|0.25|ENSG00000168411|chr16:74636502-74636502|A/-|frameshift_variant'] 104645 12640 SSYGQQSSF True PC9_epitope_Rep4 989.4090394774499 989.40794993586 56.461 2 -0.18127283348883425 0.04273488090279093 0.9438714419765777 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'ENST00000479135.5_1_22:29673993-29684776:+|nuORF', 'ENST00000483415.5_1_22:29664325-29684776:+|nuORF', 'nc|ENSG00000182944|Q01844-4|EWSR1'] 17885 4878 EIDKNDHLY True H1975_Epitope_Rep1 1145.53530261973 1145.53366490379 23.84 3 -0.18131007925239398 0.04274976807588179 0.9438714419765777 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 12979 12342 DLPRNAQVAL True PC9_epitope_Rep5 1095.6036569630699 1095.60254993586 52.467 2 -0.1813328631143029 0.04274976807588179 0.9438714419765777 ['ENSG00000078142|ENST00000262039|PIK3C3'] 126933 7629 VPVHDIYVSQ True NCI_RA007_Epitope_Rep3 1155.59242357303 1155.5913299358601 37.136 2 -0.18133710011509013 0.04274976807588179 0.9438714419765777 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 130242 19671 VTSPVWTQLP True PC9_epitope_Rep1 1126.60225998074 1126.60116993586 80.488 2 -0.18135323102510326 0.04274976807588179 0.9438714419765777 ['ENST00000524624.5_1_8:144674908-144679524:-|nuORF', 'ENST00000528303.5_1_8:144674908-144676084:-|nuORF', 'ENST00000526340.5_1_8:144674908-144676158:-|nuORF'] 4637 11286 ALASHLIEA True PC9_epitope_Rep4 923.5076313199099 923.50652993586 51.19 2 -0.18137135331800178 0.04274976807588179 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 55803 6562 LDELADDR True PC9_epitope_Rep5 945.44033960573 945.43924993586 30.211 2 -0.1814014947825624 0.0427670812744931 0.9438714419765777 ['nc|ENSG00000124222|O14662-3|STX16', 'ENST00000468590.1_1_20:57227170-57245628:+|nuORF', 'nc|ENSG00000124222|O14662-4|STX16', 'ENSG00000124222|ENST00000371141|STX16'] 26558 13603 FIVSVAKP True PC9_epitope_Rep2 859.5167394516299 859.51564993586 57.612 2 -0.18149494996620774 0.0427670812744931 0.9438714419765777 ['nc|ENSG00000100473|O43405-2|COCH', 'ENSG00000100473|ENST00000396618|COCH'] 119752 5353 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44962496793 25.637 1 -0.18153756711974048 0.04278520313505736 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 126448 13519 VPLRFPAGSAA True PC9_epitope_Rep2 1084.6029286870798 1084.60182993586 57.29 2 -0.18154897607187293 0.04280251400878388 0.9438714419765777 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 58925 21498 LFVLLPEQSPV True PC9_epitope_Rep1 1240.70672504928 1240.70562993586 87.537 2 -0.1815629168889013 0.04280251400878388 0.9438714419765777 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 34891 7412 GQVPPGESV True PC9_epitope_Rep4 868.42904664604 868.4279499358599 35.859 2 -0.18162609062288929 0.04285443876585274 0.9438714419765777 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 11365 12089 DFEYSTQSY True H1975_Epitope_Rep3 1138.44548455582 1138.44438993586 51.665 2 -0.18163656018763757 0.04285443876585274 0.9438714419765777 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 18427 15687 EKFQHYPHIKR True PC9_epitope_Rep4 1481.78916631697 1481.7875249037902 68.267 3 -0.1816395986446578 0.04285443876585274 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13'] 7058 5877 AQVHVNGGAL True NCI_RA007_Epitope_Rep4 964.5090283022399 964.50792993586 29.23 2 -0.18167112461707294 0.04285443876585274 0.9438714419765777 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1'] 15396 10932 EALRSQAAL True PC9_epitope_Rep1 957.5243440132099 957.52324993586 46.936 2 -0.18167116508871337 0.04285443876585274 0.9438714419765777 ['ENSG00000110811|ENST00000290510|P3H3'] 23548 20534 EWTVDTSKLVF True PC9_epitope_Rep4 1323.6710678165498 1323.66996993586 87.134 2 -0.18169631274372808 0.04285443876585274 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 101469 10704 SNPPAEYF True H1975_Epitope_Rep1 923.4024975450301 923.40140993586 46.132 2 -0.1817845108762677 0.04289148416649316 0.9438714419765777 ['ENSG00000183668|ENST00000270077|PSG9', 'nc|ENSG00000183668|Q00887-2|PSG9', 'ENSG00000204941|ENST00000342951|PSG5'] 38691 4803 HHSGAKVVL True PC9_epitope_Rep3 946.53484912726 946.53374993586 23.571 2 -0.18180119375844667 0.042909600242277406 0.9438714419765777 ['ENSG00000135624|ENST00000258091|CCT7', 'nc|ENSG00000135624|Q99832-3|CCT7', 'nc|ENSG00000135624|Q99832-4|CCT7', 'ENST00000479109.2_1_5:92225632-92225905:-|nuORF', 'nc|ENSG00000135624|Q99832-2|CCT7'] 34392 14852 GPTLQTTSV True PC9_epitope_Rep4 902.47091145802 902.46980993586 65.067 2 -0.18184981711171325 0.042926090659600645 0.9438714419765777 ['ENSG00000162745|ENST00000294794|OLFML2B'] 39588 10042 HPKYSDMIVA True PC9_epitope_Rep2 1159.56957995347 1159.56793490379 43.951 3 -0.18186021953402132 0.042926090659600645 0.9438714419765777 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 72418 6939 MTERQALSY True H1975_Epitope_Rep2 1097.5175443806097 1097.51644993586 31.612 2 -0.1819080258212303 0.042926090659600645 0.9438714419765777 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000480468.1_1_11:116728475-116732017:-|nuORF', 'nc|ENSG00000160584|Q9Y2K2-6|SIK3'] 95158 5978 SAAEESPPP True H1975_Epitope_Rep2 883.3923267841499 883.39122993586 27.973 2 -0.1821257618398147 0.04298043075059616 0.9438714419765777 ['ENST00000229405.8_1_6:35260320-35261695:+|nuORF', 'nc|ENSG00000065029|P36508-2|ZNF76', 'ENSG00000065029|ENST00000373953|ZNF76'] 87534 18647 QTIALITYL True H1975_Epitope_Rep2 1034.60119735158 1034.60067496793 77.389 1 -0.18214415939377696 0.04298043075059616 0.9438714419765777 ['nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'SMARCA2|p.M767I|2|0.59|ENSG00000080503|chr9:2081948-2081948|G/A|missense_variant', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant'] 65087 16661 LSDLNDELLLK True NCI_RA007_Epitope_Rep2 1271.69728256439 1271.69618993586 69.541 2 -0.18216109547058276 0.04298043075059616 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60'] 42970 17459 IGAGLSVVS True PC9_epitope_Rep4 801.4596184983301 801.4590749679301 75.154 1 -0.1823825677230892 0.0430520598754802 0.9438714419765777 ['nc|ENSG00000164124|Q7Z5S9-2|TMEM144', 'ENSG00000164124|ENST00000296529|TMEM144'] 6045 23306 APLVTLEVL True PC9_epitope_Rep1 953.57973363101 953.57862993586 94.435 2 -0.18239435772567553 0.0430520598754802 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 28327 16140 FSAFGNYDP True PC9_epitope_Rep1 1016.4239612655999 1016.42286993586 66.897 2 -0.18239930250993822 0.0430520598754802 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'ENST00000474094.1_1_6:74502386-74513776:+|nuORF'] 68390 11097 LTSSSPIPR True PC9_epitope_Rep4 956.52909504048 956.52798993586 50.462 2 -0.18240770689644223 0.0430520598754802 0.9438714419765777 ['nc|ENSG00000165806|P55210-2|CASP7'] 33591 11363 GLLENNLG True H1975_Epitope_Rep3 828.4341320264799 828.43302993586 48.819 2 -0.18246551850223902 0.0430520598754802 0.9438714419765777 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant', 'ENST00000460333.5_1_1:12359354-12409038:+|nuORF', 'ENST00000487188.1_1_1:12371595-12395946:+|nuORF'] 72720 11071 MYQEHINEI True PC9_epitope_Rep4 1175.52810906431 1175.5270099358602 50.362 2 -0.18249282619236348 0.04307016879872833 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'POLE|p.D1405N|1|0.22|ENSG00000177084|chr12:132643914-132643914|C/T|missense_variant'] 76972 14299 NVQGIIEILK True NCI_RA007_Epitope_Rep1 1125.6757592741699 1125.67466993586 59.659 2 -0.18255895703480704 0.04310556890646584 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC'] 55452 9449 LATVTVRP True PC9_epitope_Rep2 855.5178020807899 855.51670993586 41.684 2 -0.18259478121098044 0.04310556890646584 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 131811 19567 VYAPPVGGF True PC9_epitope_Rep2 905.4647038787698 905.4641549679301 80.646 1 -0.18260296987104901 0.04310556890646584 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 57417 7871 LEIIAFHCKSP True NCI_RA007_Epitope_Rep2 1256.6587293110401 1256.65762993586 35.248 2 -0.18264666582801217 0.04312367544656373 0.9438714419765777 ['ENSG00000187688|ENST00000338560|TRPV2'] 12847 9753 DLLANSSDPD True H1975_Epitope_Rep2 1045.4563835926901 1045.45528993586 42.503 2 -0.182705451196794 0.043140964995269634 0.9438714419765777 ['nc|ENSG00000164463|Q8IUR6-2|CREBRF', 'ENST00000520464.1_1_5:172507634-172535847:+|nuORF', 'ENSG00000164463|ENST00000296953|CREBRF', 'nc|ENSG00000164463|Q8IUR6-3|CREBRF'] 118607 7148 VEALIHAA True NCI_RA007_Epitope_Rep4 822.4599528515 822.45884993586 34.116 2 -0.18271854658880943 0.043140964995269634 0.9438714419765777 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000554481.1_1_15:91489865-91490237:+|nuORF', 'ENST00000556704.1_1_15:91490006-91491606:+|nuORF'] 44544 13173 IPATPGIGA True PC9_epitope_Rep2 795.4490538146299 795.44794993586 55.944 2 -0.18285310077962708 0.04315825323544994 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 137419 7609 YLLSESFRR True NCI_RA007_Epitope_Rep3 1169.61930702721 1169.61766490379 37.061 3 -0.18285870719161565 0.04315825323544994 0.9438714419765777 ['ENSG00000135577|ENST00000258042|NMBR'] 73528 22169 NFIGSVYNYI True PC9_epitope_Rep1 1188.5815245361598 1188.5804299358601 90.09 2 -0.1828640032747822 0.04317227288206137 0.9438714419765777 ['ENST00000554266.5_1_12:25348248-25356752:+|nuORF'] 98464 10212 SIKLNNTTV True PC9_epitope_Rep6 988.5553097883201 988.55420993586 49.926 2 -0.18288983282826568 0.04317227288206137 0.9438714419765777 ['RRAGD|p.I318S|1|0.18|ENSG00000025039|chr6:89372535-89372535|A/C|missense_variant'] 137828 14949 YPFRLNEA True PC9_epitope_Rep3 1008.5028802926398 1008.50178993586 62.633 2 -0.18301117488491483 0.04317227288206137 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 36294 19451 GVGPVNISV True PC9_epitope_Rep5 840.4705175352 840.46942993586 79.869 2 -0.18303371292596343 0.04317227288206137 0.9438714419765777 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q922U2'] 6203 13803 APRAALVFA True PC9_epitope_Rep2 914.5337864980999 914.53268993586 58.376 2 -0.1830863213113696 0.04317227288206137 0.9438714419765777 ['ENSG00000170006|ENST00000304385|TMEM154'] 21272 5529 ERIMKAQAL True PC9_epitope_Rep6 1058.5906497512199 1058.58954993586 29.274 2 -0.18314034705878351 0.04317227288206137 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000506915.1_1_4:190395906-190396341:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 91236 19454 RLRRQERERKF True NCI_RA007_Epitope_Rep5 1572.9073243870396 1572.9062299358602 81.717 2 -0.1832593371478588 0.04319037439225108 0.9438714419765777 ['ENSG00000159450|ENST00000614923|TCHH'] 56184 15852 LDPAIPIPD True H1975_Epitope_Rep1 949.51204799401 949.51149496793 66.282 1 -0.18330781360988724 0.04320847521755581 0.9438714419765777 ['ENSG00000172037|ENST00000305544|LAMB2'] 227 18747 AAFVHFYGV True PC9_epitope_Rep4 1009.5021520166498 1009.50104993586 80.194 2 -0.1833439472433483 0.04322657535801441 0.9438714419765777 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 106576 7649 SVYDHQGIFK True NCI_RA007_Epitope_Rep4 1192.58767254576 1192.58602490379 36.077 3 -0.1834143931263001 0.043243856761818286 0.9438714419765777 ['ENSG00000153989|ENST00000368494|NUS1'] 12600 11484 DLDTALPGT True PC9_epitope_Rep6 901.4392769765699 901.43816993586 55.246 2 -0.18348877597602825 0.043243856761818286 0.9438714419765777 ['ENSG00000269855|ENST00000601382|RNF225'] 134502 18988 WVDETLSSV True PC9_epitope_Rep4 1034.49204082542 1034.49147496793 81.129 1 -0.18349692149012417 0.04325950025535778 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 3423 6406 AGLAAEVAA True H1975_Epitope_Rep3 771.41266830591 771.41211496793 29.618 1 -0.18351904668857166 0.04325950025535778 0.9438714419765777 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF'] 41168 20603 HYTIVFNTF True PC9_epitope_Rep1 1140.56039516876 1140.55928993586 84.066 2 -0.18356305969439454 0.04325950025535778 0.9438714419765777 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'nc|ENSG00000070961|P20020-5|ATP2B1', 'nc|ENSG00000070961|P20020-2|ATP2B1', 'nc|ENSG00000058668|P23634-5|ATP2B4', 'nc|ENSG00000058668|P23634-4|ATP2B4', 'nc|ENSG00000058668|P23634-3|ATP2B4', 'nc|ENSG00000058668|P23634-2|ATP2B4', 'nc|ENSG00000058668|P23634-7|ATP2B4', 'ENSG00000058668|ENST00000357681|ATP2B4', 'nc|ENSG00000058668|P23634-8|ATP2B4', 'nc|ENSG00000058668|P23634|ATP2B4'] 54296 17409 KYPSPFFVF True NCI_RA007_Epitope_Rep2 1130.5800679841798 1130.5789699358602 72.46 2 -0.18357181977976764 0.04325950025535778 0.9438714419765777 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 23958 17633 EYNSDLHQFF True PC9_epitope_Rep6 1298.5567663402996 1298.5556699358601 80.465 2 -0.18360016894087888 0.043276778452401216 0.9438714419765777 ['nc|ENSG00000169679|O43683-2|BUB1', 'nc|ENSG00000169679|O43683-3|BUB1', 'ENSG00000169679|ENST00000302759|BUB1', 'ENST00000465029.5_1_2:111419157-111435602:-|nuORF'] 82163 9298 PTEDELSLP True H1975_Epitope_Rep1 999.4760564081099 999.47547496793 40.673 1 -0.18365438665746184 0.043276778452401216 0.9438714419765777 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 84713 14090 QHFEFEYQT True PC9_epitope_Rep4 1227.5196525555898 1227.5185499358602 62.105 2 -0.18369089142366696 0.04331051178272875 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 67885 14894 LTKPHTLPLS True PC9_epitope_Rep5 1105.64954452633 1105.64844993586 62.293 2 -0.18374331476662675 0.04331051178272875 0.9438714419765777 ['ENST00000576017.1_1_17:7306563-7306632:-|nuORF'] 125 19717 AAAWPLLL True H1975_Epitope_Rep3 853.5061747679299 853.50506993586 82.569 2 -0.18375019659102482 0.04331051178272875 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 60242 9086 LIDSQMET True H1975_Epitope_Rep1 935.42699804071 935.42590993586 39.853 2 -0.18378122500750366 0.04331051178272875 0.9438714419765777 ['ENSG00000184371|ENST00000329608|CSF1', 'nc|ENSG00000184371|P09603-2|CSF1', 'nc|ENSG00000184371|P09603-3|CSF1'] 59515 15485 LGPRLVLA True PC9_epitope_Rep2 837.5436229058099 837.54252993586 64.839 2 -0.18389076551833414 0.04331051178272875 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 82984 10890 PYERPPFAQI True NCI_RA007_Epitope_Rep3 1216.6240580544797 1216.62296993586 49.91 2 -0.18398558620341893 0.04332860520094563 0.9438714419765777 ['ENSG00000066056|ENST00000372476|TIE1'] 5850 7037 APGKGILAA True PC9_epitope_Rep2 796.4806882960798 796.47958993586 32.468 2 -0.18402242505179706 0.043345878170092854 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 55903 22319 LDGLYLLTL True PC9_epitope_Rep4 1019.5902983147099 1019.58920993586 94.089 2 -0.18403793620833586 0.043345878170092854 0.9438714419765777 ['ENST00000590435.5_1_17:74559537-74560081:+|nuORF'] 65598 8663 LSGLDVSFCDK True H1975_Epitope_Rep1 1182.55907483942 1182.55796993586 38.252 2 -0.18415796918445743 0.04340015128593041 0.9438714419765777 ['ENSG00000171823|ENST00000339235|FBXL14'] 12167 20753 DIKLFEGV True PC9_epitope_Rep2 919.5014833103098 919.50038993586 85.267 2 -0.18417316337036804 0.04340015128593041 0.9438714419765777 ['ENSG00000197275|ENST00000336148|RAD54B', 'nc|ENSG00000197275|Q9Y620-2|RAD54B'] 102315 6502 SPVFTSRSA True PC9_epitope_Rep1 950.48214484806 950.48159496793 29.813 1 -0.1841740840210173 0.04340015128593041 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 108591 11971 TEIGSFVA True H1975_Epitope_Rep2 822.4123339527399 822.4117849679301 51.126 1 -0.18423013300184427 0.043418240956109 0.9438714419765777 ['PCDHB14|p.E100Sfs*27|1|0.37|ENSG00000120327|chr5:141223801-141223801|C/-|frameshift_variant', 'ENSG00000120327|ENST00000239449|PCDHB14'] 88005 10716 QVSLEMTLET True H1975_Epitope_Rep3 1149.55874048625 1149.5576499358601 46.295 2 -0.18430950509991367 0.04343632994213532 0.9438714419765777 ['ENST00000575041.5_1_16:11862239-11862353:-|nuORF'] 32054 6282 GEVPESPEA True H1975_Epitope_Rep2 913.4028914678499 913.40178993586 29.107 2 -0.18431551360523674 0.043453596550941685 0.9438714419765777 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L', 'nc|ENSG00000185404|Q9H930-3|SP140L'] 11002 13892 DDEYDYLFK True H1975_Epitope_Rep1 1206.5080848123796 1206.50698993586 58.585 2 -0.18431652267979184 0.043453596550941685 0.9438714419765777 ['ENSG00000103769|ENST00000261890|RAB11A', 'nc|ENSG00000103769|P62491-2|RAB11A', 'nc|ENSG00000185236|Q15907-2|RAB11B', 'ENSG00000185236|ENST00000328024|RAB11B', 'ENST00000598706.1_1_19:8455252-8465174:+|nuORF', 'ENST00000601897.1_1_19:8455300-8467022:+|nuORF'] 67400 5704 LTEAAPPAPP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 26.937 2 -0.18440109578450942 0.04347168384229933 0.9438714419765777 ['ENSG00000188766|ENST00000691638|SPRED3'] 90331 17916 RIGDPQLVI True PC9_epitope_Rep5 1009.5920296502098 1009.59092993586 73.932 2 -0.18442552256121733 0.04348648137644167 0.9438714419765777 ['nc|ENSG00000154027|Q9Y6K8-3|AK5', 'ENSG00000154027|ENST00000354567|AK5', 'AK5|p.R475H|1|0.38|ENSG00000154027|chr1:77521939-77521939|G/A|missense_variant', 'nc|ENSG00000154027|Q9Y6K8-2|AK5', 'ST6GALNAC3-AK5|1|fusion'] 85582 22427 QLLNWVYLSL True PC9_epitope_Rep5 1247.69140933831 1247.6903099358601 91.266 2 -0.18443328021130653 0.04348648137644167 0.9438714419765777 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 138321 16488 YRAPEVLL True PC9_epitope_Rep1 959.5440168286299 959.54346496793 68.246 1 -0.1844691288734393 0.04348648137644167 0.9438714419765777 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'ENST00000473078.1_1_7:92300738-92355023:-|nuORF', 'nc|ENSG00000135446|P11802-2|CDK4', 'ENSG00000135446|ENST00000257904|CDK4', 'ENSG00000105810|ENST00000424848|CDK6', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 134711 6826 WWRRRWTRSQW True H1975_Epitope_Rep3 1702.8705449554998 1702.86944993586 31.212 2 -0.18447647015742175 0.04348648137644167 0.9438714419765777 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 1224 15191 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.4488949679301 63.589 1 -0.18447815572741866 0.04348648137644167 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 78779 8166 PEKNQSLAP True H1975_Epitope_Rep2 982.5083595958998 982.50726993586 36.361 2 -0.18457029177710488 0.04352264992815549 0.9438714419765777 ['CCER1|p.E267K|1|0.33|ENSG00000197651|chr12:90953944-90953944|C/T|missense_variant'] 101311 4567 SLYHSRMK True NCI_RA007_Epitope_Rep5 1020.5174848109599 1020.51638993586 24.227 2 -0.18457307069399992 0.04352264992815549 0.9438714419765777 ['ENSG00000089558|ENST00000264661|KCNH4'] 42650 11946 IETSTLTEEGV True PC9_epitope_Rep2 1177.57141334493 1177.57030993586 51.273 2 -0.184605372823943 0.04353991000869664 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 57018 13552 LEEELKKKQVY True H1975_Epitope_Rep1 1405.78168089469 1405.78058993586 57.251 2 -0.18462416832696082 0.04353991000869664 0.9438714419765777 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 101759 5438 SPHPGLVAA True PC9_epitope_Rep6 847.4552018242299 847.45410993586 28.835 2 -0.18467255684801995 0.04355634535039794 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300'] 52519 4563 KPPPPPPPP True PC9_epitope_Rep2 922.5276384884999 922.52654993586 22.921 2 -0.1847488156418322 0.04355634535039794 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 66812 21358 LSVPGLVSV True PC9_epitope_Rep3 869.52221875489 869.52167496793 87.451 1 -0.18475723777498457 0.04355634535039794 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 64362 9609 LQPGCRQTCY True PC9_epitope_Rep3 1167.51649883479 1167.5154099358601 41.912 2 -0.18476148740142118 0.04357360252556759 0.9438714419765777 ['ENSG00000183153|ENST00000578689|GJD3', 'nc|ENSG00000183153|Q8N144-2|GJD3'] 130697 15910 VVDGNFEEV True PC9_epitope_Rep1 1006.46074069714 1006.46017496793 66.008 1 -0.1847728074164994 0.04357360252556759 0.9438714419765777 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 87765 21274 QVGEVMPFI True PC9_epitope_Rep4 1018.5157534754599 1018.51464993586 89.998 2 -0.18480182796085648 0.04360564019203871 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61705957-61719950:-|nuORF'] 132189 14458 VYKAFVDNY True PC9_epitope_Rep3 1117.54441075145 1117.5433099358602 60.718 2 -0.18480699549598453 0.04360564019203871 0.9438714419765777 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR', 'ENST00000573325.1_1_17:986639-994967:-|nuORF'] 70208 21099 LYLPSFFTY True NCI_RA007_Epitope_Rep5 1149.57464825057 1149.57354993586 88.176 2 -0.1848361185429005 0.04360564019203871 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 11500 20245 DGFSQLLNL True PC9_epitope_Rep3 1005.5131106231698 1005.51200993586 83.132 2 -0.18484106197078592 0.04360564019203871 0.9438714419765777 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN', 'ERBIN|p.D635Mfs*50|1|0.47|ENSG00000112851|chr5:66048775-66048775|A/-|frameshift_variant', 'ERBIN|p.G1049Afs*21|1|0.18|ENSG00000112851|chr5:66054463-66054463|G/-|frameshift_variant'] 46793 9476 IVDHIHFQY True H1975_Epitope_Rep2 1170.5821932425 1170.58054490379 41.418 3 -0.1848525256880971 0.04360564019203871 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8'] 503 7023 AAPGAEFAPNK True PC9_epitope_Rep2 1071.5349086969097 1071.53380993586 32.416 2 -0.18488920261398092 0.04360564019203871 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 52465 6194 KPIRRKFRP True H1975_Epitope_Rep2 1196.76182937032 1196.7607299358601 28.797 2 -0.18492971425080243 0.04360564019203871 0.9438714419765777 ['nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENST00000469714.1_1_X:17092694-17165601:+|nuORF'] 24441 17185 FAGMPITL True H1975_Epitope_Rep2 848.44661128648 848.44550993586 71.391 2 -0.1849792074260062 0.043623717088476004 0.9438714419765777 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1', 'ENST00000589195.1_1_17:42307151-42307565:-|nuORF'] 78417 6331 PAYHSSLMD True NCI_RA007_Epitope_Rep3 1019.43823143075 1019.43712993586 31.908 2 -0.18506832198130094 0.0436417933015801 0.9438714419765777 ['ENSG00000111229|ENST00000228825|ARPC3', 'ENST00000548878.6_1_12:110874955-110888065:-|nuORF', 'ENST00000471641.1_1_12:110880867-110888065:-|nuORF', 'ARPC3|p.R25Qfs*16|1|0.26|ENSG00000111229|chr12:110445479-110445489|GACTTCTGATA/-|frameshift_variant', 'ENST00000543613.1_1_11:73633096-73633237:-|nuORF', 'ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 107924 12041 TAVTVNQSL True PC9_epitope_Rep2 931.4974605590301 931.49636993586 51.631 2 -0.18509331199942972 0.04365821851788853 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000425226.1_1_2:203706028-203706388:-|nuORF'] 53043 7977 KRWWKRSCQRK True NCI_RA007_Epitope_Rep1 1560.8572033904795 1560.85555490379 35.021 3 -0.18515256916270956 0.04365821851788853 0.9438714419765777 ['SETBP1|p.R384Mfs*49|1|0.08|ENSG00000152217|chr18:44950490-44950523|AGGCAGAACGTGAGTTCTGCCAGTAATCCTGAAA/-|frameshift_variant'] 75384 21333 NQDNLQLFL True PC9_epitope_Rep4 1103.5611234447501 1103.56002993586 90.226 2 -0.18517316122710215 0.04365821851788853 0.9438714419765777 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'NDRG3|p.G292Dfs*5|1|0.18|ENSG00000101079|chr20:36656516-36656516|C/-|frameshift_variant', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 52526 4225 KPPPPPPPP True PC9_epitope_Rep4 922.5276384884999 922.52654993586 22.626 2 -0.18528598026476104 0.043676292712428184 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 44912 19243 IQDNYLLI True PC9_epitope_Rep6 990.5385970950199 990.53750993586 86.669 2 -0.18538441774765002 0.04371161296418785 0.9438714419765777 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'nc|ENSG00000165323|Q8TDW7-2|FAT3'] 109348 4819 TGIDRLTPK True NCI_RA007_Epitope_Rep4 999.57129420563 999.57018993586 24.97 2 -0.18540122305787976 0.04371161296418785 0.9438714419765777 ['ENST00000432366.6_2_7:86781849-86783743:+|nuORF'] 45546 10408 ISGFEAGL True H1975_Epitope_Rep1 792.4017692690398 792.40122496793 44.985 1 -0.18546254809534288 0.04371161296418785 0.9438714419765777 ['ENST00000319074.5_1_14:23567114-23567315:+|nuORF'] 136768 17866 YIPTELDQV True PC9_epitope_Rep6 1076.53899101784 1076.53847496793 81.349 1 -0.18550705161120845 0.043728032049586155 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 117675 10351 VAKGGLGLI True PC9_epitope_Rep6 826.5276384884999 826.52654993586 50.532 2 -0.1855865414403144 0.043728032049586155 0.9438714419765777 ['ENSG00000101843|ENST00000217958|PSMD10'] 135516 12993 YEDSGIPLPA True H1975_Epitope_Rep3 1060.5076908895599 1060.50717496793 55.211 1 -0.1855959973759476 0.043728032049586155 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 70032 19789 LYGPSSVSF True PC9_epitope_Rep2 955.46509780159 955.46454496793 81.507 1 -0.18561506884407017 0.04374527588813303 0.9438714419765777 ['ENSG00000149257|ENST00000358171|SERPINH1'] 8463 18997 ATSVTFVGV True PC9_epitope_Rep2 879.4701831820299 879.46963496793 78.438 1 -0.18572216343085624 0.04374527588813303 0.9438714419765777 ['nc|ENSG00000137210|Q9NUH8-2|TMEM14B', 'ENSG00000137210|ENST00000379542|TMEM14B', 'ENST00000480194.5_1_6:10748006-10756748:+|nuORF', 'ENST00000473276.5_1_6:10748057-10756748:+|nuORF'] 31717 6876 GEIRGFETA True NCI_RA007_Epitope_Rep3 978.4770594676199 978.47596993586 34.154 2 -0.18574904964036215 0.04378058689038792 0.9438714419765777 ['ENSG00000109586|ENST00000265000|GALNT7'] 15139 5766 EAEMNHLSP True H1975_Epitope_Rep3 1026.44404508718 1026.44294993586 27.206 2 -0.18577774031553007 0.04378058689038792 0.9438714419765777 ['AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|6|3|sense'] 5101 17217 ALLSSLARC True PC9_epitope_Rep1 932.51133680136 932.51022993586 71.043 2 -0.18579028466843334 0.04378058689038792 0.9438714419765777 ['nc|ENSG00000107789|Q9UNW1-3|MINPP1', 'nc|ENSG00000107789|Q9UNW1-2|MINPP1', 'MINPP1|p.S472Vfs*6|1|0.27|ENSG00000107789|chr10:87552426-87552426|C/-|frameshift_variant', 'ENSG00000107789|ENST00000371996|MINPP1'] 55450 7108 LATVTVRP True NCI_RA007_Epitope_Rep5 855.5178020807899 855.51670993586 34.021 2 -0.1858491379555128 0.04379617208608083 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 32839 6564 GIGTVPVGR True NCI_RA007_Epitope_Rep1 854.4974009893798 854.49630993586 29.547 2 -0.18592812406346862 0.04379617208608083 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 44447 21715 INLEELETL True PC9_epitope_Rep3 1072.56520576568 1072.5641099358602 88.82 2 -0.1860801444476374 0.04379617208608083 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5'] 2774 7499 AEVDAAMAA True H1975_Epitope_Rep3 847.3745685450299 847.37346993586 33.826 2 -0.1861071197955302 0.04379617208608083 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 60966 15936 LLAESVTEV True PC9_epitope_Rep6 959.5175272972699 959.51642993586 73.593 2 -0.1861588118407247 0.04385119688639498 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 56965 4585 LEDYLTVRR True NCI_RA007_Epitope_Rep4 1163.62987171091 1163.62822490379 24.042 3 -0.18617921031696263 0.04385119688639498 0.9438714419765777 ['nc|ENSG00000111218|Q9NR22-2|PRMT8', 'ENSG00000111218|ENST00000382622|PRMT8'] 5994 17202 APLGALVSA True PC9_epitope_Rep4 797.46470387877 797.46360993586 74.173 2 -0.1862612943674912 0.043869261288494235 0.9438714419765777 ['ENST00000261497.8_1_17:20905422-20905743:-|nuORF'] 77511 17455 NYQGHFHLF True PC9_epitope_Rep3 1161.5355774032498 1161.5344899358602 72.316 2 -0.18632831553946924 0.04390455859293824 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 28381 12910 FSDPVYAEAY True H1975_Epitope_Rep2 1160.5026055091198 1160.5015099358602 54.771 2 -0.1863443998466089 0.04390455859293824 0.9438714419765777 ['ENSG00000129083|ENST00000439561|COPB1'] 3542 9050 AGLYKENLLL True NCI_RA007_Epitope_Rep4 1132.6492101731599 1132.64810993586 41.644 2 -0.18634772011709783 0.04390455859293824 0.9438714419765777 ['ENSG00000206190|ENST00000555815|ATP10A'] 5286 20564 ALRPLIPAL True PC9_epitope_Rep2 962.6276868829399 962.62658993586 84.533 2 -0.18649327168691532 0.04392096116064682 0.9438714419765777 ['ENST00000506004.5_1_5:141348908-141349118:+|nuORF'] 44518 8099 IPADSADCPK True NCI_RA007_Epitope_Rep1 1015.4644461785899 1015.46334993586 35.502 2 -0.18650086797665782 0.04392096116064682 0.9438714419765777 ['DNAH9|p.D2364_C2365insSAD|1|0.24|ENSG00000007174|chr17:11763528-11763529|-/CTGCAGACT|inframe_insertion'] 124183 17253 VLADVIDN True PC9_epitope_Rep1 857.44944773745 857.4488949679301 71.181 1 -0.1865074965709486 0.04392096116064682 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 128389 8289 VSDSISAQY True H1975_Epitope_Rep1 968.4450906330001 968.44398993586 36.816 2 -0.18660066582299775 0.04393570200789558 0.9438714419765777 ['ENST00000502379.5_1_5:218428-224813:+|nuORF', 'ENST00000504824.5_1_5:218488-235547:+|nuORF', 'nc|ENSG00000073578|P31040-3|SDHA', 'nc|ENSG00000073578|P31040-2|SDHA', 'ENSG00000073578|ENST00000264932|SDHA', 'ENST00000505555.5_1_5:218470-251793:+|nuORF'] 134713 7206 WWRRRWTRSQW True NCI_RA007_Epitope_Rep1 1702.8705449554998 1702.86944993586 32.02 2 -0.18661055363407117 0.04393570200789558 0.9438714419765777 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 14874 13019 DYFPEPVT True NCI_RA007_Epitope_Rep3 966.4334633201399 966.43236993586 58.481 2 -0.18662276703060526 0.04393570200789558 0.9438714419765777 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'ENST00000390555.3_1_14:106135325-106136152:-|nuORF', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 62508 21012 LLSSLNLLL True PC9_epitope_Rep1 984.62193279616 984.62082993586 85.651 2 -0.18662282062322968 0.04393570200789558 0.9438714419765777 ['KANK4|p.Q729Rfs*30|1|0.31|ENSG00000132854|chr1:62268333-62268333|G/-|frameshift_variant', 'ENSG00000132854|ENST00000371153|KANK4'] 226 19939 AAFVHFYGV True PC9_epitope_Rep1 1009.5021520166498 1009.50104993586 81.515 2 -0.18664183428138997 0.04393570200789558 0.9438714419765777 ['ENST00000495562.5_1_1:202910703-202913132:-|nuORF', 'ENSG00000159346|ENST00000340990|ADIPOR1'] 75294 19385 NPTLILAA True PC9_epitope_Rep1 811.4803539429099 811.47924993586 79.374 2 -0.1866727723390434 0.043952930510171316 0.9438714419765777 ['ENSG00000135047|ENST00000343150|CTSL', 'ENST00000495822.1_1_9:90342518-90343647:+|nuORF'] 131743 16254 VWYPGKPLKV True PC9_epitope_Rep5 1185.6910154154898 1185.68935490379 67.511 3 -0.18668631448541972 0.043952930510171316 0.9438714419765777 ['ENSG00000118849|ENST00000237696|RARRES1'] 2782 7391 AEVDAAMAA True NCI_RA007_Epitope_Rep4 847.3745685450299 847.37346993586 35.072 2 -0.18675874767237285 0.04397098821396192 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 81122 2611 PPHPPPPPP True NCI_RA007_Epitope_Rep3 931.49158733295 931.49048993586 14.737 2 -0.1867911532053603 0.043989045235621874 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 40510 20124 HSFTEFMGV True PC9_epitope_Rep1 1053.45896687533 1053.4578699358601 82.237 2 -0.18684371643143002 0.04406126650172808 0.9438714419765777 ['nc|ENSG00000137177|Q9H1H9-3|KIF13A', 'nc|ENSG00000137177|Q9H1H9-4|KIF13A', 'nc|ENSG00000137177|Q9H1H9-2|KIF13A', 'ENSG00000137177|ENST00000259711|KIF13A'] 88027 11651 QVSSINVSV True PC9_epitope_Rep2 931.49746055903 931.49636993586 50.145 2 -0.18685234882754764 0.04406126650172808 0.9438714419765777 ['ENSG00000113721|ENST00000261799|PDGFRB', 'nc|ENSG00000113721|P09619-2|PDGFRB'] 40926 3869 HVVFRYQGVRM True NCI_RA007_Epitope_Rep2 1390.7292089127 1390.7281099358602 19.685 2 -0.1868574624046998 0.04406126650172808 0.9438714419765777 ['nc|ENSG00000197948|Q86WN1-3|FCHSD1'] 92064 7736 RPRVTEPISA True PC9_epitope_Rep5 1124.6302060640799 1124.62855490379 34.698 3 -0.18686141349067037 0.04406126650172808 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 63775 14218 LPSDIAAEA True PC9_epitope_Rep5 885.4443623570099 885.44326993586 59.695 2 -0.18691174211370612 0.044078487658401166 0.9438714419765777 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94524146-94547480:-|nuORF'] 90678 4443 RKLKNFKTL True NCI_RA007_Epitope_Rep4 1146.7237125261 1146.7220549037902 23.459 3 -0.18708725421560796 0.044078487658401166 0.9438714419765777 ['ENSG00000110107|ENST00000227524|PRPF19', 'ENST00000539960.1_1_11:60665249-60666641:-|nuORF'] 86254 6260 QPYRYTVKA True PC9_epitope_Rep3 1124.59784330664 1124.5961849037901 29.116 3 -0.1871191466830258 0.044094874796993616 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 83081 20099 PYMDSPQSIGF True PC9_epitope_Rep4 1240.5434247752798 1240.54287496793 85.444 1 -0.18717932911558152 0.044094874796993616 0.9438714419765777 ['ENSG00000120265|ENST00000464889|PCMT1', 'nc|ENSG00000120265|P22061-2|PCMT1'] 80586 18860 PLPAIVPAA True PC9_epitope_Rep5 847.51673945163 847.51564993586 77.562 2 -0.18718740670457626 0.044094874796993616 0.9438714419765777 ['ENST00000521856.1_1_8:55013466-55014395:-|nuORF', 'ENST00000517297.5_1_8:54967680-55014407:-|nuORF', 'ENST00000519926.5_1_8:54966225-55014407:-|nuORF', 'nc|ENSG00000120992|O75608-2|LYPLA1', 'ENSG00000120992|ENST00000316963|LYPLA1'] 16898 7073 EGALPLREN True NCI_RA007_Epitope_Rep1 997.5192586327701 997.51816993586 31.506 2 -0.18725472669761953 0.044131810027381736 0.9438714419765777 ['MATN2|p.R155L|2|0.15|ENSG00000132561|chr8:97931274-97931274|G/T|missense_variant'] 118142 11125 VAVERLKE True PC9_epitope_Rep4 942.5498304850598 942.54872993586 50.569 2 -0.18738039359861783 0.04418762746430999 0.9438714419765777 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 41298 11168 IAHEIYQKILS True NCI_RA007_Epitope_Rep1 1313.7343367794501 1313.73268490379 47.44 3 -0.18745235374797348 0.04422372446089354 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 84102 15488 QEQGDAPAILF True H1975_Epitope_Rep3 1187.5822528121496 1187.5811499358601 64.991 2 -0.18746314768108385 0.04422372446089354 0.9438714419765777 ['nc|ENSG00000204257|P28067|HLA-DMA', 'ENSG00000204257|ENST00000374843|HLA-DMA', 'ENST00000477541.1_1_6:32918272-32920828:-|nuORF', 'ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 140759 18559 YYQSSVQYL True PC9_epitope_Rep5 1149.5342399905699 1149.53367496793 76.411 1 -0.18751632675858732 0.044260654468551146 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5', 'nc|ENSG00000164818|Q86Y56-3|DNAAF5'] 30643 15035 GALEPHINAQI True PC9_epitope_Rep5 1161.61422164677 1161.6131299358601 62.836 2 -0.18755981735643537 0.04427702881311129 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 93610 11673 RSYWKEVLL True H1975_Epitope_Rep2 1192.6604435631998 1192.65880490379 49.973 3 -0.18757252987601325 0.04427702881311129 0.9438714419765777 ['nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7', 'ENST00000513075.1_1_17:47900608-47903534:+|nuORF', 'ENST00000503635.1_1_17:47903366-47904308:+|nuORF'] 42775 17974 IFHEVPLKF True PC9_epitope_Rep5 1128.6331661861998 1128.63151490379 74.155 3 -0.18758157942424256 0.04427702881311129 0.9438714419765777 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000483823.1_1_3:88997907-88998639:+|nuORF'] 132994 19571 VYVGSFSWW True NCI_RA007_Epitope_Rep3 1129.5232813840498 1129.52218993586 85.365 2 -0.18777288338027692 0.04437059834223892 0.9438714419765777 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7'] 54292 7917 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 39.885 3 -0.187928864067234 0.04446332483715661 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 81123 4369 PPHPPPPPP True NCI_RA007_Epitope_Rep4 931.49158733295 931.49048993586 23.154 2 -0.18792939440308398 0.04446332483715661 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 77658 5080 PAAAAAAAAA True PC9_epitope_Rep3 754.3973525949399 754.3962499358599 24.626 2 -0.18797014099978426 0.04448052561028565 0.9438714419765777 ['ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENST00000358055.7_2_2:220492239-220492678:+|nuORF', 'FOXE1|p.A165P|1|0.33|ENSG00000178919|chr9:97854407-97854407|G/C|missense_variant', 'ENST00000541901.5_1_6:161519319-161529903:+|nuORF', 'ENST00000373509.5_1_6:37137999-37138269:+|nuORF', 'ENST00000331920.10_1_9:98270819-98270936:-|nuORF', 'ENST00000257359.6_1_11:130297588-130298293:-|nuORF', 'ENST00000370272.8_1_1:93811487-93811679:+|nuORF', 'ENST00000280665.10_1_12:2062308-2062389:-|nuORF', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000267909|ENST00000599174|CCDC177', 'ENSG00000085511|ENST00000392142|MAP3K4', 'ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENSG00000163064|ENST00000295206|EN1', 'nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ZIC2|p.S454T|1|0.33|ENSG00000043355|chr13:99985443-99985443|T/A|missense_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 48293 16802 KDLNFQGKTI True PC9_epitope_Rep1 1162.63462273818 1162.63352993586 69.453 2 -0.18800662743500038 0.04448052561028565 0.9438714419765777 ['ENST00000498783.5_1_9:130687427-130690958:-|nuORF', 'nc|ENSG00000167103|Q5T9C9-2|PIP5KL1', 'ENST00000464759.5_1_9:130684128-130689655:-|nuORF', 'ENSG00000167103|ENST00000388747|PIP5KL1'] 128356 12974 VSDPNLIHV True PC9_epitope_Rep4 992.52909504048 992.52798993586 57.799 2 -0.18802220211840612 0.044498565171424254 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 31319 11515 GEAEAFAIGA True NCI_RA007_Epitope_Rep3 934.4396113297398 934.43850993586 52.411 2 -0.1880468949589179 0.04451576363979611 0.9438714419765777 ['ENSG00000137312|ENST00000376389|FLOT1', 'nc|ENSG00000137312|O75955-2|FLOT1', 'ENST00000487376.5_1_6:30695895-30698542:-|nuORF'] 107444 14373 SYVPKVAGL True PC9_epitope_Rep4 932.5331177917599 932.53202993586 63.193 2 -0.1880592098678664 0.04451576363979611 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 45752 9469 ISNEFKVEV True PC9_epitope_Rep6 1063.5549754351498 1063.5538699358601 46.662 2 -0.18812695748913702 0.044531279495601615 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 100539 17823 SLPTAPLAP True PC9_epitope_Rep3 865.49091862661 865.48982993586 73.754 2 -0.18816277202471868 0.044531279495601615 0.9438714419765777 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 105114 16261 STLPDVTEV True PC9_epitope_Rep6 959.48114178855 959.4805949679301 74.912 1 -0.1881764984979766 0.044531279495601615 0.9438714419765777 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35166876-35196659:-|nuORF'] 126708 13485 VPRPPSLLA True PC9_epitope_Rep4 948.5756513100799 948.57454993586 59.766 2 -0.18817969769520704 0.044531279495601615 0.9438714419765777 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A', 'ENST00000494435.5_1_21:47924311-47965916:+|nuORF'] 78048 5049 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 26.058 2 -0.18820880765203915 0.044546793008418586 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 47641 8419 IYPPKLHQF True NCI_RA007_Epitope_Rep4 1141.62841515893 1141.62676490379 39.198 3 -0.18822662946774324 0.044546793008418586 0.9438714419765777 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1', 'chr19:29817541-29821722|132|15.0|0.35|5.43|+|0|CCNE1,CCNE1|1'] 69318 12774 LVPPDQPEV True PC9_epitope_Rep6 992.51786165044 992.51676993586 60.629 2 -0.1882448252240826 0.044546793008418586 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 37074 23035 GVSIALLGV True PC9_epitope_Rep1 827.5116540711899 827.51054993586 93.403 2 -0.18825606155228727 0.044546793008418586 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-3|CDCP1'] 23348 11640 EVTINPDTT True PC9_epitope_Rep4 988.47130538084 988.47020993586 52.53 2 -0.1882843317526279 0.044563145278496065 0.9438714419765777 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B', 'ENSG00000240038|ENST00000684275|AMY2B', 'ENSG00000243480|ENST00000414303|AMY2A', 'CON__Q3MHH8'] 26128 10249 FHGPGEAL True PC9_epitope_Rep3 826.3973525949399 826.3962499358599 44.373 2 -0.18832979183019538 0.044563145278496065 0.9438714419765777 ['ENSG00000277150|ENST00000622749|F8A3'] 128559 19523 VSIAELAQA True PC9_epitope_Rep2 900.4916469025999 900.49054993586 80.479 2 -0.1883522780896119 0.044563145278496065 0.9438714419765777 ['ENSG00000198171|ENST00000354488|DDRGK1'] 130921 22705 VVIDILQQI True PC9_epitope_Rep2 1039.62774645259 1039.62664993586 92.829 2 -0.18837057602919577 0.0445811785134574 0.9438714419765777 ['ENSG00000198920|ENST00000361413|KIAA0753', 'nc|ENSG00000198920|Q2KHM9-2|KIAA0753'] 4717 15953 ALDSTNVEL True PC9_epitope_Rep4 960.47639076128 960.47584496793 69.292 1 -0.18850443004021977 0.04464993394980185 0.9438714419765777 ['ENST00000487325.5_1_1:156038076-156039544:+|nuORF', 'ENSG00000132698|ENST00000361084|RAB25'] 11363 12126 DFEYSTQSY True H1975_Epitope_Rep1 1138.44548455582 1138.44438993586 51.659 2 -0.18852413905663545 0.04464993394980185 0.9438714419765777 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 132962 16092 VYVAALKTL True PC9_epitope_Rep2 976.5957180483199 976.59462993586 67.155 2 -0.18853084065907894 0.04464993394980185 0.9438714419765777 ['ENSG00000095015|ENST00000399503|MAP3K1', 'MAP3K1|p.T946Kfs*22|1|0.62|ENSG00000095015|chr5:56882037-56882037|C/-|frameshift_variant', 'MAP3K1|p.T947Nfs*56|1|0.61|ENSG00000095015|chr5:56882039-56882040|AC/-|frameshift_variant'] 78040 5524 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 26.637 2 -0.18855952398864564 0.04464993394980185 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 80226 14760 PLARRLRDP True H1975_Epitope_Rep2 1092.651610215 1092.65050993586 61.933 2 -0.188588225030015 0.04464993394980185 0.9438714419765777 ['ENST00000396958.7_2_16:2933286-2946389:+|nuORF', 'ENST00000573965.1_3_16:2933286-2946490:+|nuORF'] 127222 14435 VQIEHISSL True PC9_epitope_Rep5 1024.5553097883198 1024.5542099358602 60.524 2 -0.1886096964799415 0.04464993394980185 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 74964 19002 NLVKWESL True PC9_epitope_Rep6 987.5389314481899 987.53782993586 85.734 2 -0.18861591757552507 0.04464993394980185 0.9438714419765777 ['ENSG00000065802|ENST00000264607|ASB1'] 55401 5365 LASVPAGG True NCI_RA007_Epitope_Rep5 670.3649898374999 670.36444496793 27.326 1 -0.18862123483031246 0.04464993394980185 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 23695 8305 EYHKWRIYYKK True NCI_RA007_Epitope_Rep2 1612.8514322203598 1612.84978490379 36.944 3 -0.1886983737968666 0.04468683361325508 0.9438714419765777 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'MLXIPL|p.A789Qfs*28|1|0.14|ENSG00000009950|chr7:73594349-73594349|C/-|frameshift_variant', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL'] 58487 7112 LEYQGKYILK True NCI_RA007_Epitope_Rep1 1253.7019740220096 1253.70031490379 31.655 3 -0.18872204803224032 0.04470401751174683 0.9438714419765777 ['ENSG00000121879|ENST00000263967|PIK3CA'] 36322 14693 GVGTSLLSTL True PC9_epitope_Rep5 946.53351171458 946.53240993586 61.52 2 -0.18875462746549776 0.04470401751174683 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'NCOA3|p.K620Nfs*18|1|0.15|ENSG00000124151|chr20:47636241-47636241|A/-|frameshift_variant'] 74539 18320 NLAEKLIGV True PC9_epitope_Rep4 955.5702315764698 955.56912993586 78.537 2 -0.18877797625014506 0.04474091406574329 0.9438714419765777 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB', 'ENST00000495949.1_1_20:37126104-37128277:+|nuORF'] 59263 14209 LGGQLNVSV True PC9_epitope_Rep6 885.4919812557699 885.49088993586 66.542 2 -0.18887617439682416 0.04475893952259647 0.9438714419765777 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1'] 82178 18354 PTEKFLQEL True PC9_epitope_Rep2 1103.58627556343 1103.5851699358602 75.929 2 -0.18895269835898948 0.04481132075471698 0.9438714419765777 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1'] 110028 21403 THVDILNDFTL True PC9_epitope_Rep2 1286.65066672514 1286.6495699358602 87.798 2 -0.1889600241931977 0.04481132075471698 0.9438714419765777 ['ENSG00000114491|ENST00000232607|UMPS', 'nc|ENSG00000114491|P11172-4|UMPS', 'nc|ENSG00000114491|P11172-2|UMPS', 'nc|ENSG00000114491|P11172-3|UMPS'] 34960 17423 GQWYGPNTV True PC9_epitope_Rep3 1020.4664947839199 1020.46597496793 72.186 1 -0.1889763491780469 0.04481132075471698 0.9438714419765777 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-3|ATG4B', 'ENST00000482507.5_1_2:242592964-242610957:+|nuORF', 'ENST00000494465.5_1_2:242592964-242606150:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 138209 19460 YQSGFSLV True PC9_epitope_Rep2 899.4388830537499 899.43833496793 80.234 1 -0.18898260726156108 0.04481132075471698 0.9438714419765777 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'ENST00000587856.1_1_17:43311355-43318139:+|nuORF'] 46136 7659 ITAPPGTAA True PC9_epitope_Rep2 797.42831837005 797.4272299358599 34.83 2 -0.18898680617897887 0.04481132075471698 0.9438714419765777 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 85609 20493 QLNGILLHL True PC9_epitope_Rep2 1019.6127650947899 1019.61166993586 84.257 2 -0.18901756989874777 0.04482595981511178 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000411618.1_1_9:30799684-30799825:-|nuORF', 'ENST00000402024.2_1_6:116778703-116778877:-|nuORF', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 108278 6988 TEASEDDMG True H1975_Epitope_Rep2 953.3284061982499 953.32730993586 31.802 2 -0.18903808555916068 0.04482595981511178 0.9438714419765777 ['nc|ENSG00000132563|Q9BRK0|REEP2', 'ENSG00000132563|ENST00000378339|REEP2', 'ENST00000507635.5_1_5:137780026-137781437:+|nuORF'] 43326 14471 IHETIFNSI True PC9_epitope_Rep1 1072.55530978832 1072.5542099358602 60.487 2 -0.1890625941242343 0.04482595981511178 0.9438714419765777 ['ENST00000441772.1_1_11:1824121-1824694:-|nuORF'] 98280 16948 SIFKNAIQL True PC9_epitope_Rep6 1032.59678067748 1032.59568993586 77.734 2 -0.18907866906600646 0.04482595981511178 0.9438714419765777 ['SH3PXD2A-OBFC1|2|fusion', 'SH3PXD2A-OBFC1|3|fusion', 'ENST00000466828.5_1_10:105642444-105658073:-|nuORF', 'ENSG00000107960|ENST00000224950|STN1'] 4174 11390 AIARKLLLM True NCI_RA007_Epitope_Rep4 1027.65760711223 1027.6565099358602 50.725 2 -0.18909441020762546 0.04482595981511178 0.9438714419765777 ['ENSG00000204361|ENST00000389586|NXPE2', 'nc|ENSG00000204361|Q96DL1-3|NXPE2'] 71307 7093 MHDGNVITA True PC9_epitope_Rep1 956.43856578392 956.43746993586 32.092 2 -0.1891452830980043 0.044862845715579365 0.9438714419765777 ['ENST00000553691.5_1_14:77907431-77919723:-|nuORF', 'VIPAS39|p.H309Ifs*2|1|0.36|ENSG00000151445|chr14:77435381-77435381|G/-|frameshift_variant', 'ENSG00000151445|ENST00000557658|VIPAS39', 'ENST00000555854.1_1_14:77906782-77910618:-|nuORF', 'nc|ENSG00000151445|Q9H9C1-2|VIPAS39'] 89390 14886 REMIPFAVV True NCI_RA007_Epitope_Rep2 1060.57393705792 1060.57282993586 62.579 2 -0.18917102361511492 0.04489973022431 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'ENST00000586456.1_1_17:75486911-75493449:+|nuORF'] 55039 12114 LALEVCPLPP True H1975_Epitope_Rep1 1050.5783537320199 1050.5772499358602 51.61 2 -0.18925195970918232 0.04491690090362014 0.9438714419765777 ['ENSG00000143502|ENST00000366878|SUSD4'] 44144 18337 ILPKVIYRF True PC9_epitope_Rep5 1147.7117508600697 1147.7101049037901 75.548 3 -0.18925623977610484 0.04491690090362014 0.9438714419765777 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|22|1|sense', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|14|1|sense', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|127|3|sense', 'L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|11|1|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|9|1|sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|159|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|163|3|sense', 'L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|154|3|sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|57|1|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|69|2|sense', 'nc|ENSG999|O00370|L1_ORF2'] 78039 5340 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 25.928 2 -0.18947265679195088 0.044934070287298865 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 115200 12417 TVATVGQGIS True PC9_epitope_Rep3 931.4974605590298 931.49691496793 52.791 1 -0.1894760583907053 0.044934070287298865 0.9438714419765777 ['ENSG00000055147|ENST00000351797|FAM114A2', 'FAM114A2|p.G173Vfs*5|1|0.11|ENSG00000055147|chr5:154028261-154028261|C/-|frameshift_variant'] 75259 11233 NPNELSVSA True PC9_epitope_Rep1 929.44542498617 929.44432993586 48.087 2 -0.18952574089130284 0.044947846917026614 0.9438714419765777 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 30247 13168 GAAGGFLL True NCI_RA007_Epitope_Rep1 704.38572528208 704.3851749679301 55.218 1 -0.189531977063761 0.044947846917026614 0.9438714419765777 ['nc|ENSG00000119946|Q9NRU3-2|CNNM1', 'ENSG00000119946|ENST00000356713|CNNM1'] 129172 11529 VTDELPLP True H1975_Epitope_Rep3 882.4698488288599 882.46930496793 49.472 1 -0.18955589956420252 0.044947846917026614 0.9438714419765777 ['ENSG00000018408|ENST00000360632|WWTR1'] 19375 8414 ELNLLKAQLNE True H1975_Epitope_Rep1 1283.7085159544297 1283.7074099358601 37.292 2 -0.18960038678425375 0.044947846917026614 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1'] 103769 13948 SRFPEALRL True PC9_epitope_Rep4 1087.61382772395 1087.6127299358602 61.554 2 -0.1896311400615905 0.044947846917026614 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 138614 10151 YRREITSL True PC9_epitope_Rep2 1036.5665431783598 1036.5654499358602 44.383 2 -0.18963560908582686 0.044947846917026614 0.9438714419765777 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant', 'ENST00000469463.1_1_1:186321098-186322975:-|nuORF'] 72721 12461 MYQEHINEI True PC9_epitope_Rep5 1175.52810906431 1175.5270099358602 52.931 2 -0.1896672325868281 0.044978783592644976 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'POLE|p.D1405N|1|0.22|ENSG00000177084|chr12:132643914-132643914|C/T|missense_variant'] 36601 20000 GVLKGYRVIFW True PC9_epitope_Rep5 1336.7655773380798 1336.76392490379 81.984 3 -0.18972203960973305 0.044978783592644976 0.9438714419765777 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1', 'DSCAML1|p.A1642Rfs*2|1|0.38|ENSG00000177103|chr11:117435773-117435777|GAGCA/-|frameshift_variant'] 57165 7117 LEERTPPVP True H1975_Epitope_Rep2 1036.5553097883198 1036.5542099358602 32.308 2 -0.18973222773720388 0.044978783592644976 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 37492 12532 GYEPPVQESV True PC9_epitope_Rep6 1103.51350454599 1103.5124099358602 59.639 2 -0.18978051715066876 0.044978783592644976 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 135023 7256 YAHPSGTAL True PC9_epitope_Rep1 915.4450310633499 915.44392993586 32.723 2 -0.18979376518028776 0.044978783592644976 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF'] 41814 10953 IDSFDRRIL True PC9_epitope_Rep1 1133.61930702721 1133.61766490379 47.018 3 -0.18981494639414576 0.044978783592644976 0.9438714419765777 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 124301 4967 VLDKFMRIYR True NCI_RA007_Epitope_Rep4 1339.74346199451 1339.74181490379 25.575 3 -0.18982377271182427 0.044978783592644976 0.9438714419765777 ['ENSG00000116005|ENST00000433351|PCYOX1', 'nc|ENSG00000116005|Q9UHG3-2|PCYOX1'] 69530 6888 LVSWGAGC[Carbamidomethyl]QKS True NCI_RA007_Epitope_Rep2 1191.57064286206 1191.56954993586 31.41 2 -0.18984337564224332 0.044978783592644976 0.9438714419765777 ['nc|ENSG00000283706|Q9UI38|PRSS50'] 134712 7159 WWRRRWTRSQW True NCI_RA007_Epitope_Rep1 1702.8705449554998 1702.86944993586 31.836 2 -0.18989704164012283 0.04501225721289836 0.9438714419765777 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 55449 6860 LATVTVRP True NCI_RA007_Epitope_Rep3 855.5178020807899 855.51670993586 34.094 2 -0.18991303443763383 0.04501225721289836 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 78959 5057 PFHDSEVR True NCI_RA007_Epitope_Rep3 985.46174375665 985.46064993586 26.886 2 -0.18993773422222096 0.04501225721289836 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF'] 130412 11157 VTVPPGPSL True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 50.992 2 -0.18994700433882797 0.04501225721289836 0.9438714419765777 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4', 'nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 56690 8439 LEAEGGAKTLS True NCI_RA007_Epitope_Rep1 1074.5557037111398 1074.55460993586 36.824 2 -0.1899818251675569 0.04501225721289836 0.9438714419765777 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 118942 12928 VEESALPSA True PC9_epitope_Rep2 901.4392769765699 901.43816993586 55.022 2 -0.1900269797604592 0.04504572452154238 0.9438714419765777 ['ENSG00000122299|ENST00000355758|ZC3H7A'] 2432 7582 AEQLRQMM True H1975_Epitope_Rep2 1005.47357139365 1005.47246993586 34.117 2 -0.1900336308046877 0.04504572452154238 0.9438714419765777 ['ENST00000270502.6_1_19:11040414-11040630:+|nuORF'] 14875 21191 DYGNGFGGF True PC9_epitope_Rep1 932.3664463894798 932.3658949679301 86.347 1 -0.1900393161880229 0.04504572452154238 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 4141 11865 AHVDLIEKL True PC9_epitope_Rep6 1036.59169529704 1036.5905899358602 56.854 2 -0.19005532408161432 0.04504572452154238 0.9438714419765777 ['ENSG00000177700|ENST00000322028|POLR2L'] 112873 10927 TPPGPLASA True PC9_epitope_Rep2 809.42831837005 809.4272299358599 47.352 2 -0.1900732459724565 0.04504572452154238 0.9438714419765777 ['ENSG00000124875|ENST00000226317|CXCL6'] 116958 14718 TYPIKTPTF True PC9_epitope_Rep6 1066.5698972233001 1066.5688099358601 68.56 2 -0.19020706633072018 0.045081735392273316 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 106278 4796 SVQRRSPEAL True NCI_RA007_Epitope_Rep5 1141.6203696563698 1141.61872490379 25.133 3 -0.1902387963944857 0.045081735392273316 0.9438714419765777 ['ENST00000571306.1_1_17:1057467-1057878:-|nuORF'] 80830 17490 PLTQTLGV True PC9_epitope_Rep2 827.4752685624699 827.47416993586 72.531 2 -0.1903278279191916 0.045154600301659124 0.9438714419765777 ['nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F', 'ENSG00000049769|ENST00000055335|PPP1R3F'] 27973 18878 FQSSAVMAL True PC9_epitope_Rep4 952.4688032830398 952.4682549679301 80.701 1 -0.19043488682626783 0.045154600301659124 0.9438714419765777 ['ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'H3C7|p.E95K|1|0.26|ENSG00000277775|chr6:26250323-26250323|C/T|missense_variant', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 52962 17752 KRLYYREKKYK True H1975_Epitope_Rep3 1573.90928144965 1573.90818993586 74.236 2 -0.19045178145448263 0.045154600301659124 0.9438714419765777 ['nc|ENSG00000135124|Q99571-2|P2RX4', 'ENST00000499638.6_1_12:121661214-121671021:+|nuORF', 'ENST00000543318.5_1_12:121659934-121671349:+|nuORF', 'nc|ENSG00000135124|Q99571-3|P2RX4', 'ENSG00000135124|ENST00000337233|P2RX4'] 81120 4070 PPHPPPPPP True NCI_RA007_Epitope_Rep3 931.49158733295 931.49048993586 22.508 2 -0.1905075069381868 0.04516919596568951 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 106332 6093 SVSDGIHSV True PC9_epitope_Rep6 899.4348603024702 899.43376993586 31.833 2 -0.19052233545614958 0.04516919596568951 0.9438714419765777 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 69314 13766 LVPPDQPEV True PC9_epitope_Rep4 992.51786165044 992.51676993586 60.845 2 -0.1905656157817928 0.04516919596568951 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 101343 9307 SLYYDYEPP True H1975_Epitope_Rep2 1145.49170647225 1145.4906099358602 40.757 2 -0.19056706558234643 0.04516919596568951 0.9438714419765777 ['COL11A2|p.P897Lfs*87|1|0.39|ENSG00000204248|chr6:33173394-33173394|G/-|frameshift_variant', 'nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'COL11A2|p.I1056Lfs*289|1|0.19|ENSG00000204248|chr6:33171560-33171560|G/-|frameshift_variant'] 103639 18546 SRDLSLLI True PC9_epitope_Rep4 915.5389314481899 915.53838496793 79.412 1 -0.19056853498522697 0.04516919596568951 0.9438714419765777 ['ENSG00000242550|ENST00000238508|SERPINB10'] 25616 6515 FETLQEKAQ True H1975_Epitope_Rep3 1092.5451390274397 1092.5440499358601 30.029 2 -0.19065348096249496 0.04518719601854994 0.9438714419765777 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3', 'ENST00000586709.1_1_18:21478707-21479460:+|nuORF'] 52037 9564 KLGSLHSRK True NCI_RA007_Epitope_Rep4 1024.61416207712 1024.61306993586 43.634 2 -0.19073772471023503 0.04520434323631428 0.9438714419765777 ['ENST00000443959.1_1_1:151254316-151254367:+|nuORF'] 60867 24494 LKNWEIRERKK True PC9_epitope_Rep5 1498.8732302940996 1498.8721299358601 99.296 2 -0.19074617842098615 0.04520434323631428 0.9438714419765777 ['ENSG00000119707|ENST00000261973|RBM25', 'ENST00000532683.5_1_14:73569902-73577964:+|nuORF'] 35121 8339 GRTEALELAP True NCI_RA007_Epitope_Rep4 1055.56112344475 1055.56002993586 38.891 2 -0.19076312547060023 0.04522234160870139 0.9438714419765777 ['ENST00000339007.3_1_19:18508083-18508422:-|nuORF'] 78051 5303 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 27.108 2 -0.19076927663518908 0.04523948653182786 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 106157 15158 SVPDPELIKTV True PC9_epitope_Rep6 1196.66525416012 1196.66414993586 70.381 2 -0.1907963432755753 0.04523948653182786 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 47406 12098 IYIKHPHLF True PC9_epitope_Rep4 1166.66004964038 1166.6584049037901 54.339 3 -0.19093710148378543 0.045290059934411396 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 77016 19425 NVVDVFHAV True PC9_epitope_Rep3 998.51853035678 998.51742993586 79.944 2 -0.19094046386684968 0.045290059934411396 0.9438714419765777 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 108355 4405 TEDPNHLPP True H1975_Epitope_Rep3 1018.4719740871799 1018.47086993586 22.065 2 -0.19097407235449937 0.045290059934411396 0.9438714419765777 ['nc|ENSG00000051108|Q15011-3|HERPUD1', 'nc|ENSG00000051108|Q15011-4|HERPUD1', 'nc|ENSG00000051108|Q15011-2|HERPUD1', 'ENSG00000051108|ENST00000439977|HERPUD1'] 31387 5028 GEASPPAPP True NCI_RA007_Epitope_Rep3 821.3919328613299 821.39082993586 26.773 2 -0.19097509247721722 0.045290059934411396 0.9438714419765777 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 5486 16917 AMLAVLHTV True PC9_epitope_Rep4 953.5368232732101 953.53572993586 73.06 2 -0.1910393437598051 0.045290059934411396 0.9438714419765777 ['ENSG00000123395|ENST00000336854|ATG101'] 134068 14727 WQLQDDKNQSL True PC9_epitope_Rep1 1373.6575430107298 1373.65644993586 61.47 2 -0.19110026616004197 0.045290059934411396 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2'] 5984 16515 APLAIPSAAA True PC9_epitope_Rep2 880.50181766348 880.50072993586 68.766 2 -0.19110188944459916 0.045290059934411396 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 11497 21577 DGFLSELTQQL True NCI_RA007_Epitope_Rep1 1249.6190322436898 1249.6184749679298 88.296 1 -0.1911871261489467 0.04530378410975426 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 80571 13187 PLNKDHIPIT True PC9_epitope_Rep2 1146.6397081186199 1146.63805490379 55.999 3 -0.19119599579867208 0.04530378410975426 0.9438714419765777 ['nc|ENSG00000113569|O75694-2|NUP155', 'ENSG00000113569|ENST00000231498|NUP155'] 120910 21641 VGEEFQIVL True PC9_epitope_Rep2 1032.5491617787197 1032.5480699358602 88.716 2 -0.19122302070674171 0.04530378410975426 0.9438714419765777 ['ANTXR2|p.A359Cfs*13|1|0.21|ENSG00000163297|chr4:79984831-79984832|-/G|frameshift_variant', 'ENSG00000163297|ENST00000403729|ANTXR2', 'nc|ENSG00000163297|P58335|ANTXR2', 'nc|ENSG00000163297|P58335-3|ANTXR2'] 46794 9315 IVDHIHFQY True H1975_Epitope_Rep3 1170.5821932425 1170.58054490379 40.825 3 -0.19123275662534087 0.04530378410975426 0.9438714419765777 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8'] 31389 5245 GEASPPAPP True NCI_RA007_Epitope_Rep4 821.3919328613299 821.39082993586 26.715 2 -0.19128568863448855 0.04530378410975426 0.9438714419765777 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 27517 18276 FPFAPPAAA True PC9_epitope_Rep6 887.4541391950698 887.45304993586 82.94 2 -0.19128732358990283 0.04530378410975426 0.9438714419765777 ['ENSG00000204516|ENST00000252229|MICB', 'nc|ENSG00000204516|Q29980-2|MICB', 'nc|ENSG00000204516|Q29980-3|MICB'] 17577 16060 EHLKYFVNM True PC9_epitope_Rep5 1179.57466533391 1179.5735699358602 66.764 2 -0.19136626456087766 0.045338911187743795 0.9438714419765777 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'ENST00000472697.5_1_3:142095319-142144369:-|nuORF'] 54629 17609 LADLSCLVY True H1975_Epitope_Rep2 995.4997690581499 995.49866993586 73.048 2 -0.19136726797169148 0.045338911187743795 0.9438714419765777 ['ENSG00000100632|ENST00000557016|ERH', 'ENST00000216520.6_1_14:69847257-69864987:-|nuORF', 'DCAF5-ERH|1|fusion', 'ENST00000523006.1_1_7:139219111-139219246:+|nuORF'] 139520 15104 YTKYSYYI True PC9_epitope_Rep3 1099.52261267771 1099.5215099358602 63.236 2 -0.19140290857003253 0.045338911187743795 0.9438714419765777 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.P1652Rfs*13|1|0.38|ENSG00000042781|chr1:216086751-216086751|G/-|frameshift_variant'] 82432 17298 PVCPPGGIQEV True PC9_epitope_Rep1 1094.5430308524599 1094.54192993586 71.353 2 -0.19142042746542332 0.045356045902504284 0.9438714419765777 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'CON__Q922U2'] 140530 10030 YYKPDSPEY True PC9_epitope_Rep5 1160.5026055091198 1160.5015099358602 43.56 2 -0.19142975280749494 0.045356045902504284 0.9438714419765777 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.W992Mfs*12|1|0.31|ENSG00000163939|chr3:52587502-52587503|-/T|frameshift_variant', 'PBRM1|p.P1361Hfs*23|1|0.28|ENSG00000163939|chr3:52563287-52563287|G/-|frameshift_variant', 'PBRM1|p.N258Mfs*25|1|0.53|ENSG00000163939|chr3:52648384-52648384|T/-|frameshift_variant'] 99196 5241 SLASNRVQHSV True PC9_epitope_Rep3 1196.6261833128 1196.6245349037902 25.239 3 -0.1914715773188755 0.04537232438950859 0.9438714419765777 ['nc|ENSG00000196503|Q6T311|ARL9', 'ENSG00000196503|ENST00000640821|ARL9'] 5823 12302 APGAAFVGS True PC9_epitope_Rep3 775.38645355807 775.3859049679301 52.345 1 -0.1914726372975876 0.04537232438950859 0.9438714419765777 ['ENST00000360105.8_1_19:13207240-13207303:+|nuORF'] 100296 19182 SLLVEVEEVV True PC9_epitope_Rep4 1114.6121559581 1114.6110499358601 81.88 2 -0.19149863389209387 0.04537232438950859 0.9438714419765777 ['ENST00000434813.3_1_2:201724904-201726163:-|nuORF', 'ENST00000473565.5_1_2:201725944-201726163:-|nuORF'] 112783 6751 TPLHVTSPSSA True PC9_epitope_Rep4 1095.55603806431 1095.5549499358601 33.164 2 -0.19155280888976556 0.04540915343018107 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 118154 4815 VAVKGYSKT True NCI_RA007_Epitope_Rep5 951.5389314481899 951.53782993586 25.209 2 -0.1917039210365074 0.045424571848446595 0.9438714419765777 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 77367 21964 NYLPFIMEL True PC9_epitope_Rep6 1138.57326835158 1138.57216993586 97.405 2 -0.19172881011928297 0.045424571848446595 0.9438714419765777 ['nc|ENSG00000116750|Q9Y5K5-2|UCHL5', 'nc|ENSG00000116750|Q9Y5K5-4|UCHL5', 'ENSG00000116750|ENST00000367454|UCHL5', 'nc|ENSG00000116750|Q9Y5K5|UCHL5'] 129536 14791 VTFYPQDAP True PC9_epitope_Rep6 1036.4865615221597 1036.48546993586 68.861 2 -0.19180020087057337 0.045424571848446595 0.9438714419765777 ['ENSG00000128965|ENST00000617768|CHAC1'] 39264 5380 HLPAGPSPA True PC9_epitope_Rep6 845.43955176009 845.43844993586 28.568 2 -0.191808609034226 0.045424571848446595 0.9438714419765777 ['ENST00000394430.5_1_11:64511793-64512018:-|nuORF'] 8189 7796 ATGIILPAR True NCI_RA007_Epitope_Rep3 910.5600012459399 910.55890993586 37.789 2 -0.19182169403081084 0.04543913190912174 0.9438714419765777 ['ENSG00000163909|ENST00000372852|HEYL'] 27126 6387 FLQVTATDA True NCI_RA007_Epitope_Rep3 964.48656152216 964.48546993586 32.127 2 -0.19182408908857912 0.04543913190912174 0.9438714419765777 ['ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant'] 59819 9131 LHDINAQM True PC9_epitope_Rep3 940.4436511643601 940.44254993586 40.06 2 -0.19186962768706162 0.04543913190912174 0.9438714419765777 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 24687 5300 FATNSRNI True PC9_epitope_Rep4 921.46682913709 921.4657299358599 27.097 2 -0.19187228641237125 0.04543913190912174 0.9438714419765777 ['PRKN|p.I229F|1|0.07|ENSG00000185345|chr6:161973351-161973351|T/A|missense_variant'] 139810 12934 YVDDTPAEQM True PC9_epitope_Rep1 1167.47540478511 1167.4743099358602 54.623 2 -0.19187420546157843 0.04543913190912174 0.9438714419765777 ['ENSG00000136628|ENST00000366923|EPRS1'] 6473 5434 APTASTVSA True PC9_epitope_Rep5 803.40249754503 803.40140993586 25.912 2 -0.1920017727083866 0.04547423942733352 0.9438714419765777 ['ENST00000338302.7_1_1:156876157-156878457:+|nuORF'] 126500 13497 VPNKFLVTA True PC9_epitope_Rep1 987.5753169569099 987.57420993586 56.773 2 -0.1920272173189559 0.04547423942733352 0.9438714419765777 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 132237 11584 VYKTIMEQF True NCI_RA007_Epitope_Rep3 1157.57908200801 1157.5779899358602 52.693 2 -0.1920359627716449 0.04547423942733352 0.9438714419765777 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 78659 14840 PEALEAQV True PC9_epitope_Rep3 855.4337976733099 855.43324496793 62.218 1 -0.1920408225097522 0.0454879358083291 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 101470 10885 SNPPAEYF True H1975_Epitope_Rep3 923.4024975450301 923.40140993586 46.953 2 -0.19205612068145556 0.0454879358083291 0.9438714419765777 ['ENSG00000183668|ENST00000270077|PSG9', 'nc|ENSG00000183668|Q00887-2|PSG9', 'ENSG00000204941|ENST00000342951|PSG5'] 38119 6521 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 33.754 2 -0.19205660938750127 0.0454879358083291 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 75339 7865 NQADKAINTAV True PC9_epitope_Rep3 1143.5884008217502 1143.58730993586 35.238 2 -0.19209226778402588 0.0454879358083291 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 20288 17169 EPAIQGVLD True PC9_epitope_Rep5 940.4865615221598 940.48601496793 71.061 1 -0.19220286195621464 0.0454879358083291 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 89466 4303 REQELMRAA True NCI_RA007_Epitope_Rep4 1102.5553268716599 1102.5542299358601 22.896 2 -0.19227107739800126 0.0454879358083291 0.9438714419765777 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1'] 93256 24101 RRRRRWWSVTW True PC9_epitope_Rep5 1643.9021794369498 1643.90108993586 97.688 2 -0.19231962683131743 0.04550505716384457 0.9438714419765777 ['ENST00000380486.3_2_21:43339056-43362335:-|nuORF'] 78032 6166 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 28.532 2 -0.19232341741105252 0.04550505716384457 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 108546 14395 TEGEPPFLP True H1975_Epitope_Rep3 985.4756624852898 985.47511496793 60.724 1 -0.19236840515949735 0.04552303461784759 0.9438714419765777 ['ENSG00000241058|ENST00000377304|NSUN6'] 119751 5248 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44962496793 25.253 1 -0.19239306335517126 0.04554101139466993 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 57610 7809 LELPARGG True PC9_epitope_Rep3 811.4552018242299 811.45410993586 35.029 2 -0.19240263210854514 0.04555812946117483 0.9438714419765777 ['ENST00000359523.6_1_1:167734946-167741561:+|nuORF'] 59210 13323 LGGALSWE True H1975_Epitope_Rep3 831.41266830591 831.41211496793 56.507 1 -0.19242295527003586 0.04555812946117483 0.9438714419765777 ['ENST00000371717.7_1_9:139317959-139318130:+|nuORF'] 24228 17559 EYVSQHLVF True PC9_epitope_Rep2 1120.5553097883198 1120.5542099358602 72.813 2 -0.19244971819536755 0.045576104561377076 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 27745 11439 FQDRPVSSL True PC9_epitope_Rep3 1047.53490869691 1047.53380993586 49.0 2 -0.1924749033397808 0.045592361725767874 0.9438714419765777 ['ENSG00000130147|ENST00000392011|SH3BP4'] 6503 13607 APTPGLLQ True PC9_epitope_Rep3 795.4490538146299 795.44794993586 57.404 2 -0.19250052540716697 0.045592361725767874 0.9438714419765777 ['ENSG00000021762|ENST00000263650|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5', 'ENST00000498536.5_1_11:3109437-3111932:-|nuORF'] 39107 16508 HLDATKLLL True PC9_epitope_Rep2 1022.61243074162 1022.61132993586 68.74 2 -0.19253347675416613 0.045592361725767874 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 42848 10451 IFNPVSKNF True NCI_RA007_Epitope_Rep3 1064.5654805492002 1064.5643899358602 48.172 2 -0.19256675837132955 0.04560689940872971 0.9438714419765777 ['ENST00000589391.5_1_2:179401165-179403504:+|nuORF', 'ENST00000415561.1_1_2:179402212-179403504:+|nuORF', 'ENST00000588244.5_1_2:179402120-179403504:+|nuORF', 'ENST00000419746.5_1_2:179402219-179403504:+|nuORF', 'ENST00000589434.5_1_2:179388144-179403504:+|nuORF'] 39688 9471 HPTLITHW True PC9_epitope_Rep5 1003.5239500903901 1003.52284993586 41.387 2 -0.1925857150993872 0.04560689940872971 0.9438714419765777 ['nc|ENSG00000166333|Q13418-3|ILK', 'nc|ENSG00000166333|Q13418-2|ILK', 'ENSG00000166333|ENST00000299421|ILK'] 82371 5466 PTTSGPSTPP True H1975_Epitope_Rep3 940.45017601344 940.44906993586 26.079 2 -0.19258576766498006 0.04560689940872971 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 9397 7536 AVVGVVAGGG True NCI_RA007_Epitope_Rep5 784.4443027873598 784.4437549679301 35.673 1 -0.1926891016562094 0.04560689940872971 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8', 'ENST00000430538.1_1_21:31635868-31636186:-|nuORF'] 107648 20663 TAIELIPSV True PC9_epitope_Rep4 941.5433481222899 941.54224993586 87.639 2 -0.19269314950934308 0.04560689940872971 0.9438714419765777 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 100169 18162 SLLERIRHSYH True PC9_epitope_Rep5 1409.75278080825 1409.75113490379 74.869 3 -0.19271425625159838 0.045624870544372684 0.9438714419765777 ['HLA-DRA|p.T235Pfs*30|1|0.1|ENSG00000204287|chr6:32443845-32443845|G/-|frameshift_variant'] 20736 13985 EQLEEIEKLY True H1975_Epitope_Rep1 1292.6499980187998 1292.64890993586 58.951 2 -0.19280580091057178 0.04564026284573817 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 91392 6844 RNAGDEVTI True PC9_epitope_Rep5 973.48287312405 973.48176993586 31.296 2 -0.19282925184717808 0.04564026284573817 0.9438714419765777 ['SNTG2|p.V152F|1|0.22|ENSG00000172554|chr2:1165590-1165590|G/T|missense_variant', 'SNTG2|p.W268Cfs*12|2|0.89|ENSG00000172554|chr2:1237971-1237971|G/-|frameshift_variant', 'ENSG00000172554|ENST00000308624|SNTG2'] 87389 8205 QTDPATLLH True H1975_Epitope_Rep2 994.5083595959 994.50726993586 36.514 2 -0.19288171511614827 0.04564026284573817 0.9438714419765777 ['ENSG00000114744|ENST00000473414|COMMD2', 'ENST00000463077.5_1_3:149459310-149470177:-|nuORF'] 28984 11518 FTHKEFEQL True PC9_epitope_Rep1 1177.5767735088898 1177.57513490379 49.183 3 -0.19288245706080942 0.04564026284573817 0.9438714419765777 ['ENST00000524832.5_1_11:882499-902261:-|nuORF', 'ENSG00000177830|ENST00000323578|CHID1', 'nc|ENSG00000177830|Q9BWS9-2|CHID1', 'nc|ENSG00000177830|Q9BWS9-3|CHID1'] 33501 22364 GLGVGLLYL True PC9_epitope_Rep3 903.5429541994699 903.54184993586 91.303 2 -0.19289617476770546 0.04565823166139479 0.9438714419765777 ['ENSG00000179846|ENST00000686631|NKPD1', 'nc|ENSG00000179846|Q17RQ9|NKPD1'] 32378 9699 GGETLDQVKMR True NCI_RA007_Epitope_Rep2 1232.6183210510399 1232.61722993586 42.347 2 -0.19302193448714164 0.04569416726286855 0.9438714419765777 ['ENSG00000078237|ENST00000179259|TIGAR'] 48567 4950 KEHQETIVP True H1975_Epitope_Rep2 1079.56112344475 1079.56002993586 24.123 2 -0.1930436182804039 0.04569416726286855 0.9438714419765777 ['ENSG00000062096|ENST00000381127|ARSF'] 132487 7710 VYPEKLATKF True NCI_RA007_Epitope_Rep3 1194.6648602372995 1194.66322490379 37.448 3 -0.19305412254414375 0.045711273439265 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 34545 5897 GQEVNELKT True PC9_epitope_Rep3 1016.51383889916 1016.51274993586 27.746 2 -0.1930820049618231 0.045711273439265 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 47603 15346 IYNQVKQII True PC9_epitope_Rep3 1117.64954452633 1117.64844993586 64.184 2 -0.19320702993473104 0.04574806559105371 0.9438714419765777 ['nc|ENSG00000075711|Q12959-5|DLG1', 'nc|ENSG00000075711|Q12959-3|DLG1', 'nc|ENSG00000075711|Q12959-6|DLG1', 'ENSG00000075711|ENST00000667157|DLG1', 'nc|ENSG00000075711|Q12959|DLG1', 'nc|ENSG00000075711|Q12959-7|DLG1', 'nc|ENSG00000075711|Q12959-2|DLG1', 'nc|ENSG00000075711|Q12959-8|DLG1', 'nc|ENSG00000075711|Q12959-9|DLG1'] 102129 4830 SPQRIASAV True PC9_epitope_Rep4 927.5137793295098 927.51268993586 25.162 2 -0.1932828454121994 0.045784856357543584 0.9438714419765777 ['ENSG00000112139|ENST00000434837|MDGA1', 'nc|ENSG00000112139|Q8NFP4-2|MDGA1'] 95214 16036 SAAMVFSAL True NCI_RA007_Epitope_Rep5 895.4473395624699 895.44624993586 68.41 2 -0.1932967804343122 0.04580023342494635 0.9438714419765777 ['ENSG00000185883|ENST00000330398|ATP6V0C'] 105265 15973 STTGMLTGV True PC9_epitope_Rep1 865.42151873745 865.4209649679301 66.247 1 -0.19330086483796474 0.04580023342494635 0.9438714419765777 ['ENSG00000066084|ENST00000301180|DIP2B'] 16527 9015 EEPSQLEEL True NCI_RA007_Epitope_Rep5 1072.49243474824 1072.4913299358602 41.334 2 -0.1933161628223989 0.04580023342494635 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 65511 13574 LSFTQQGW True PC9_epitope_Rep1 965.46068112749 965.45958993586 57.068 2 -0.19333486182195422 0.04580023342494635 0.9438714419765777 ['nc|ENSG00000184178|Q8WU76-2|SCFD2', 'ENSG00000184178|ENST00000401642|SCFD2'] 39818 15961 HQEVLYSL True PC9_epitope_Rep3 987.5025459394699 987.50144993586 66.54 2 -0.19338933767317457 0.04581733303215119 0.9438714419765777 ['ENSG00000129933|ENST00000262815|MAU2', 'ENST00000262816.11_1_19:19456115-19463084:+|nuORF'] 129478 5184 VTESDLSR True NCI_RA007_Epitope_Rep5 905.44542498617 905.44432993586 26.634 2 -0.19343960530104687 0.04581733303215119 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'ENST00000460094.1_1_9:138758268-138774700:-|nuORF', 'ENST00000312405.10_1_9:138742295-138774724:-|nuORF'] 129596 14439 VTGPRRQPWF True PC9_epitope_Rep3 1242.6621748986997 1242.66052490379 60.646 3 -0.19345139178261486 0.04583529411764706 0.9438714419765777 ['ENST00000507297.5_1_5:138861213-138862139:-|nuORF', 'ENST00000514348.1_1_5:138861213-138862244:-|nuORF'] 104444 16973 SSLLPKEIV True PC9_epitope_Rep3 984.58554728744 984.58444993586 70.447 2 -0.19346034441514487 0.04585152838427948 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 23671 20090 EYGSIIAFF True NCI_RA007_Epitope_Rep3 1045.51204799401 1045.5114749679299 87.546 1 -0.19347301641577289 0.04585152838427948 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 17361 6789 EHDTTEYKL True PC9_epitope_Rep3 1134.51931820242 1134.51822993586 31.134 2 -0.19351813757270211 0.04585152838427948 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 63056 13083 LNKQGCYTV True PC9_epitope_Rep3 1024.50116604048 1024.5000699358602 55.348 2 -0.19353434491355417 0.04586776081760178 0.9438714419765777 ['ENSG00000157570|ENST00000520358|TSPAN18'] 15363 4705 EALHVITN True NCI_RA007_Epitope_Rep1 895.47633119163 895.4752299358599 22.383 2 -0.19354426035596295 0.04586776081760178 0.9438714419765777 ['ENSG00000147912|ENST00000432825|FBXO10', 'nc|ENSG00000147912|Q9UK96-2|FBXO10', 'ENST00000541804.1_1_9:37512546-37588833:-|nuORF', 'ENST00000276960.7_1_9:37515899-37521812:-|nuORF'] 5733 11596 APDASTWP True PC9_epitope_Rep1 843.37628279719 843.37518993586 49.481 2 -0.193546665876635 0.04586776081760178 0.9438714419765777 ['ENST00000509525.5_1_5:132534789-132560973:-|nuORF'] 65458 9339 LSFEEDFQN True NCI_RA007_Epitope_Rep5 1127.4771190372699 1127.4760299358602 42.564 2 -0.19357488608631046 0.045884854986543204 0.9438714419765777 ['nc|ENSG00000165509|Q8TD91-2|MAGEC3'] 133920 16641 WNPRRWWRWCW True PC9_epitope_Rep2 1730.8153385785 1730.81424993586 69.255 2 -0.1935951522235902 0.045884854986543204 0.9438714419765777 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 138882 17506 YSDSGLFGIY True H1975_Epitope_Rep1 1120.5076908895599 1120.50717496793 72.833 1 -0.1936422609239745 0.0459207678554625 0.9438714419765777 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'ENSG00000140740|ENST00000268379|UQCRC2'] 110912 15474 TLAQLQQSL True PC9_epitope_Rep1 1000.5553097883201 1000.55420993586 64.342 2 -0.1936425674184775 0.0459207678554625 0.9438714419765777 ['ENSG00000137877|ENST00000320955|SPTBN5'] 118789 14756 VEEASAPATL True PC9_epitope_Rep4 986.4920408254198 986.49094993586 64.692 2 -0.1937034115429668 0.04593526533684607 0.9438714419765777 ['ENST00000471073.1_1_22:21354171-21355180:-|nuORF', 'ENSG00000184436|ENST00000215742|THAP7'] 67881 13147 LTKMEQQQLE True PC9_epitope_Rep1 1246.62273772514 1246.6216499358602 55.435 2 -0.19378007616099274 0.04593526533684607 0.9438714419765777 ['nc|ENSG00000119969|Q9NRZ9-4|HELLS', 'nc|ENSG00000119969|Q9NRZ9-3|HELLS', 'nc|ENSG00000119969|Q9NRZ9-2|HELLS', 'ENSG00000119969|ENST00000348459|HELLS', 'nc|ENSG00000119969|Q9NRZ9-6|HELLS', 'nc|ENSG00000119969|Q9NRZ9-5|HELLS', 'ENST00000462057.2_1_10:96313888-96330576:+|nuORF', 'nc|ENSG00000119969|Q9NRZ9-9|HELLS', 'nc|ENSG00000119969|Q9NRZ9-8|HELLS', 'nc|ENSG00000119969|Q9NRZ9-7|HELLS'] 1221 14899 AEDGFFVPP True H1975_Epitope_Rep2 977.4494477374499 977.4488949679301 62.463 1 -0.19383435299250734 0.04593526533684607 0.9438714419765777 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA'] 116225 15848 TVTTLVQAP True PC9_epitope_Rep2 928.5229470308799 928.52184993586 66.219 2 -0.19384016426160228 0.04593526533684607 0.9438714419765777 ['ENST00000438404.5_2_21:40816571-40817638:-|nuORF'] 125688 5117 VMYAFCRVK True NCI_RA007_Epitope_Rep5 1115.5619924752298 1115.5608899358601 26.38 2 -0.1938541045856544 0.04593526533684607 0.9438714419765777 ['nc|ENSG00000136279|Q9UJU6-6|DBNL', 'ENSG00000136279|ENST00000448521|DBNL', 'nc|ENSG00000136279|Q9UJU6-2|DBNL', 'nc|ENSG00000136279|Q9UJU6-3|DBNL', 'ENST00000458579.5_1_7:44091436-44097592:+|nuORF'] 113922 11032 TRIGLINDM-[Oxidation] True PC9_epitope_Rep4 1047.53828020563 1047.5371899358602 50.211 2 -0.19399172388980201 0.04594889549542769 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.P364L|1|0.32|ENSG00000107581|chr10:119065430-119065430|G/A|missense_variant'] 42391 11683 IENLRQQAHK True PC9_epitope_Rep1 1235.67346785839 1235.6723699358602 49.816 2 -0.19401056836108474 0.04594889549542769 0.9438714419765777 ['ENSG00000171951|ENST00000305409|SCG2'] 95507 11757 SAPSPGLSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 50.557 2 -0.19416010003582532 0.04594889549542769 0.9438714419765777 ['ENST00000333483.14_1_17:60501366-60501510:+|nuORF'] 98483 12075 SIKYKEENL True PC9_epitope_Rep1 1122.59208921986 1122.59044490379 51.306 3 -0.19417274055759212 0.04594889549542769 0.9438714419765777 ['ENSG00000196187|ENST00000366835|TMEM63A', 'TMEM63A|p.Q382Sfs*55|1|0.41|ENSG00000196187|chr1:225860939-225860939|G/-|frameshift_variant', 'ENST00000537914.5_1_1:226053833-226054426:-|nuORF'] 28961 14115 FTETDDPEEYY True H1975_Epitope_Rep3 1407.53542175903 1407.5343299358601 59.622 2 -0.1941833631115568 0.04594889549542769 0.9438714419765777 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 117350 9035 VAARDQLSV True PC9_epitope_Rep3 957.52434401321 957.52324993586 39.695 2 -0.19422174556127006 0.04594889549542769 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 69401 12420 LVQPPPASTI True NCI_RA007_Epitope_Rep4 1021.5807962601699 1021.57968993586 54.775 2 -0.1942354725168786 0.04596598178670881 0.9438714419765777 ['CFAP61|p.A893Pfs*70|1|0.32|ENSG00000089101|chr20:20277339-20277339|G/-|frameshift_variant', 'nc|ENSG00000089101|Q8NHU2-6|CFAP61', 'nc|ENSG00000089101|Q8NHU2-4|CFAP61', 'ENSG00000089101|ENST00000245957|CFAP61'] 28921 20425 FTEGELMSV True PC9_epitope_Rep5 1011.4582981689899 1011.45777496793 83.601 1 -0.1942361529419595 0.04596598178670881 0.9438714419765777 ['STK11|p.P281Rfs*6|1|0.82|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENSG00000118046|ENST00000326873|STK11', 'STK11|p.M51Ifs*112|1|0.39|ENSG00000118046|chr19:1207065-1207066|-/C|frameshift_variant'] 65093 13059 LSDLVVYCK True PC9_epitope_Rep1 1038.5419682232998 1038.5408699358602 55.098 2 -0.1943999642704219 0.04603864461628191 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2', 'PLCG2|p.E929K|1|0.31|ENSG00000197943|chr16:81934474-81934474|G/A|missense_variant'] 19863 9225 ELVNQGQAL True PC9_epitope_Rep6 970.5083595958998 970.50726993586 45.628 2 -0.19442341030643523 0.04603864461628191 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3'] 140942 4524 YYYYHRQYRRV True NCI_RA007_Epitope_Rep2 1665.81644369397 1665.81534993586 22.23 2 -0.19445900567341476 0.04603864461628191 0.9438714419765777 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2009625-2011290:+|nuORF'] 51940 3423 KKVCRWDSFTK True NCI_RA007_Epitope_Rep2 1396.7285402063596 1396.72690490379 17.971 3 -0.19448799824815582 0.04607453953680884 0.9438714419765777 ['ENSG00000130988|ENST00000397180|RGN', 'nc|ENSG00000130988|Q15493-2|RGN', 'ENST00000469346.1_1_X:46940570-46944097:+|nuORF'] 58160 7205 LESGPHREMA True H1975_Epitope_Rep3 1125.52369239021 1125.5225899358602 32.69 2 -0.1945496826875798 0.04607453953680884 0.9438714419765777 ['ENST00000484414.5_1_3:67048755-67053668:+|nuORF', 'ENST00000469661.1_1_3:67048755-67053962:+|nuORF'] 98357 5936 SIHENFSQA True PC9_epitope_Rep4 1031.4672230599099 1031.4661299358602 29.759 2 -0.1946030982496011 0.04609075174956731 0.9438714419765777 ['ENSG00000125633|ENST00000376300|CCDC93'] 55678 20481 LDAYSTLIF True H1975_Epitope_Rep3 1041.53826274185 1041.53767496793 85.619 1 -0.19462844026209972 0.04609075174956731 0.9438714419765777 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 106222 18044 SVPNKDVFQEL True PC9_epitope_Rep5 1274.65066672514 1274.6495699358602 74.422 2 -0.19467132186140312 0.04609075174956731 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 42687 14194 IEVQSNSL True PC9_epitope_Rep1 888.4552613938799 888.45416993586 59.42 2 -0.19469851627963694 0.04610869687905638 0.9438714419765777 ['ENSG00000099219|ENST00000339450|ERMP1', 'ENST00000475005.1_1_9:5812814-5833063:-|nuORF', 'ENST00000214893.9_1_9:5823966-5832826:-|nuORF'] 22286 9797 ETDSIHIEY True H1975_Epitope_Rep3 1105.49276910141 1105.49166993586 42.708 2 -0.19470651819442344 0.0461266413333835 0.9438714419765777 ['ENST00000302754.5_1_19:12903662-12904103:+|nuORF'] 78037 5159 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 25.22 2 -0.19472373985805447 0.04613850957378776 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 56297 14788 LDQTLLDLNEM-[Oxidation] True H1975_Epitope_Rep1 1319.6278830556698 1319.6267899358602 62.107 2 -0.19473579254231854 0.04613850957378776 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 13580 9177 DPPSNPVAA True PC9_epitope_Rep5 866.4133965819 866.41228993586 40.245 2 -0.1947483521241894 0.04613850957378776 0.9438714419765777 ['ENSG00000056277|ENST00000370978|ZNF280C'] 125865 9345 VNRQAVAL True PC9_epitope_Rep1 869.5083000262498 869.50720993586 40.803 2 -0.1947639040821735 0.04613850957378776 0.9438714419765777 ['nc|ENSG00000198788|Q02817|MUC2'] 116475 22124 TYASQRWRRR True PC9_epitope_Rep1 1378.73304842318 1378.73140490379 89.912 3 -0.19477744207672948 0.04613850957378776 0.9438714419765777 ['ENSG00000070388|ENST00000215530|FGF22'] 61547 11630 LLGGIVAA True NCI_RA007_Epitope_Rep3 712.44832553864 712.4477749679301 52.868 1 -0.1948394959057401 0.04613850957378776 0.9438714419765777 ['ENSG00000119227|ENST00000412723|PIGZ', 'PIGZ|p.H312Lfs*39|1|0.11|ENSG00000119227|chr3:196947952-196947964|GAGCCGCGCGTGC/-|frameshift_variant'] 66721 4613 LSTNKATIA True NCI_RA007_Epitope_Rep3 917.5181960036099 917.51708993586 25.06 2 -0.1948546624371015 0.04613850957378776 0.9438714419765777 ['ENST00000538862.6_1_12:6960604-6960844:-|nuORF'] 63004 19071 LNFTVAIDFT True PC9_epitope_Rep2 1139.5862755634298 1139.5851699358602 78.72 2 -0.1948715392983012 0.04613850957378776 0.9438714419765777 ['ENSG00000144550|ENST00000383832|CPNE9', 'nc|ENSG00000144550|Q8IYJ1-2|CPNE9'] 66124 7611 LSPACPAPK True NCI_RA007_Epitope_Rep1 882.46332397978 882.46222993586 33.597 2 -0.19492600053581235 0.04615558230514595 0.9438714419765777 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2', 'ENST00000470046.1_1_22:50881704-50882673:+|nuORF'] 83905 9113 QEISHLIEP True NCI_RA007_Epitope_Rep3 1064.55022440788 1064.54912993586 42.931 2 -0.194932183977848 0.04615558230514595 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 61465 20124 LLFFAYDVFG True PC9_epitope_Rep3 1190.6011973515797 1190.60010993586 82.66 2 -0.194961705720136 0.0461897239148424 0.9438714419765777 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'P3H1|p.F627Lfs*4|1|0.68|ENSG00000117385|chr1:42747755-42747756|AA/-|frameshift_variant', 'ENST00000460031.5_1_1:43220834-43232642:-|nuORF', 'ENST00000495874.5_1_1:43220834-43223503:-|nuORF'] 32854 5716 GIIEAFRRYAR True NCI_RA007_Epitope_Rep5 1350.75205253226 1350.7504049037902 28.674 3 -0.19496846327978745 0.0461897239148424 0.9438714419765777 ['ENSG00000143536|ENST00000271835|CRNN'] 103001 13306 SQISQLQRL True PC9_epitope_Rep5 1071.6036569630699 1071.60254993586 56.194 2 -0.19498527631189622 0.0461897239148424 0.9438714419765777 ['ENST00000462400.1_1_16:24816349-24826700:+|nuORF', 'nc|ENSG00000090905|Q8NDV7-3|TNRC6A', 'nc|ENSG00000090905|Q8NDV7-2|TNRC6A', 'nc|ENSG00000090905|Q8NDV7-6|TNRC6A', 'nc|ENSG00000090905|Q8NDV7-5|TNRC6A', 'ENSG00000090905|ENST00000395799|TNRC6A'] 52522 4939 KPPPPPPPP True PC9_epitope_Rep3 922.5276384884999 922.52654993586 24.091 2 -0.1949931223462017 0.0461897239148424 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 130867 4737 VVGPSHEV True PC9_epitope_Rep5 822.42356734278 822.42246993586 23.27 2 -0.1950780914122101 0.04620592383638928 0.9438714419765777 ['ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 54898 13837 LAGPAELL True H1975_Epitope_Rep3 782.4538048418999 782.4532549679301 58.532 1 -0.19512088499589855 0.04620592383638928 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 111937 12736 TLSAFPEETGY True H1975_Epitope_Rep2 1213.55028397753 1213.54918993586 54.092 2 -0.19515894475806386 0.04620592383638928 0.9438714419765777 ['ENST00000560980.5_1_15:71197061-71276639:+|nuORF'] 16007 9118 EEAENTLQSFR True NCI_RA007_Epitope_Rep1 1322.61025846514 1322.60967496793 39.469 1 -0.19519489580454294 0.04624005716542244 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 107672 19823 TAISLFYEL True NCI_RA007_Epitope_Rep5 1055.5539128059902 1055.55337496793 83.16 1 -0.19520346969713578 0.04624005716542244 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 74883 7610 NLQTVNVDEN True NCI_RA007_Epitope_Rep4 1144.53603089572 1144.5349299358602 35.924 2 -0.19520438239322624 0.04624005716542244 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 36672 13437 GVLSDLTK True H1975_Epitope_Rep3 831.47018318203 831.46908993586 56.956 2 -0.19520592663860123 0.04624005716542244 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 76942 15733 NVPDSFNEV True PC9_epitope_Rep4 1019.45598966987 1019.4554749679301 68.442 1 -0.19523783013370932 0.04629472932062203 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 26119 10638 FHGAPLTV True PC9_epitope_Rep6 840.4493881678001 840.44828993586 51.735 2 -0.19524007234029522 0.04629472932062203 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'ENSG00000196862|ENST00000408999|RGPD4', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 95508 12532 SAPSPGLSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 53.203 2 -0.1952628619513324 0.04631179136190136 0.9438714419765777 ['ENST00000333483.14_1_17:60501366-60501510:+|nuORF'] 54900 20343 LAGPAELL True PC9_epitope_Rep1 782.4538048418999 782.4532549679301 83.081 1 -0.1953006608882237 0.04631179136190136 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 7876 6967 ATAPPAPAY True NCI_RA007_Epitope_Rep3 857.42831837005 857.4277649679301 34.511 1 -0.19532090079559813 0.04632972322503008 0.9438714419765777 ['ENSG00000135837|ENST00000367607|CEP350'] 18264 13140 EITAALSP True PC9_epitope_Rep1 800.42798401688 800.42743496793 55.411 1 -0.19532589017014973 0.046347654413838486 0.9438714419765777 ['ENSG00000111012|ENST00000228606|CYP27B1'] 32381 13313 GGFDGTTYL True H1975_Epitope_Rep2 929.41306222873 929.4125149679301 56.339 1 -0.19548096345697485 0.04640057154674839 0.9438714419765777 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 47418 9176 IYIKQIKTF True NCI_RA007_Epitope_Rep4 1152.6906810623198 1152.6890249037901 42.135 3 -0.1955641428491112 0.04640057154674839 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 98089 11427 SHYEEAMGL True PC9_epitope_Rep4 1035.43314605031 1035.43204993586 51.722 2 -0.19557125289126628 0.04640057154674839 0.9438714419765777 ['ENSG00000176953|ENST00000320805|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-3|NFATC2IP', 'nc|ENSG00000176953|Q8NCF5-2|NFATC2IP'] 2472 17573 AEQPPPPPLWI True H1975_Epitope_Rep2 1243.6601092100298 1243.65900993586 72.906 2 -0.19561108127312563 0.04640057154674839 0.9438714419765777 ['ENSG00000135045|ENST00000376854|C9orf40'] 58880 18526 LFSYSQIF True NCI_RA007_Epitope_Rep3 1003.5014833103099 1003.50038993586 81.066 2 -0.1956450135966155 0.046418499717992105 0.9438714419765777 ['ENSG00000127529|ENST00000248072|OR7C2'] 6239 2612 APRGTGIVSA True PC9_epitope_Rep2 927.5137793295098 927.51268993586 14.706 2 -0.19574708797311174 0.0464355542186795 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000494359.1_1_11:17250107-17250695:+|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF'] 56299 15253 LDQTLLDLNEM-[Oxidation] True NCI_RA007_Epitope_Rep1 1319.6278830556698 1319.6267899358602 63.405 2 -0.19575937770954582 0.0464355542186795 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF', 'ENST00000338274.4_1_2:26032796-26032832:-|nuORF'] 118858 4287 VEEKPPPAP True H1975_Epitope_Rep3 962.5072969667398 962.50618993586 21.605 2 -0.1958544979915992 0.04646965937288518 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C', 'ENST00000498596.5_1_1:171557633-171560983:+|nuORF'] 71956 9972 MPVDRNLL True PC9_epitope_Rep4 956.51133680136 956.51022993586 46.018 2 -0.19587100530688759 0.04646965937288518 0.9438714419765777 ['PLCH1|p.N1188Mfs*12|1|0.11|ENSG00000114805|chr3:155482487-155482487|T/-|frameshift_variant', 'nc|ENSG00000114805|Q4KWH8-2|PLCH1', 'ENSG00000114805|ENST00000460012|PLCH1', 'nc|ENSG00000114805|Q4KWH8|PLCH1', 'nc|ENSG00000114805|Q4KWH8-3|PLCH1', 'nc|ENSG00000114805|Q4KWH8-4|PLCH1'] 118014 7958 VASQAPQSL True H1975_Epitope_Rep2 899.4712458111899 899.47014993586 35.558 2 -0.19591976176301246 0.04646965937288518 0.9438714419765777 ['ENSG00000185359|ENST00000329138|HGS', 'nc|ENSG00000185359|O14964-2|HGS'] 75697 17771 NQVALPNI True PC9_epitope_Rep4 867.48141657207 867.48030993586 76.385 2 -0.1959365280453459 0.04646965937288518 0.9438714419765777 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 128951 8061 VSVKEDIGI True NCI_RA007_Epitope_Rep4 958.5335117145798 958.53240993586 37.785 2 -0.19600647373260666 0.04648583619992857 0.9438714419765777 ['nc|ENSG00000151632|P52895-2|AKR1C2', 'chr10:5000460-5000550|324|17.55|0.77|4.51|-|0|AKR1C2,AKR1C2|1'] 25980 17738 FGYPFRLNEA True PC9_epitope_Rep6 1212.5927579262 1212.5916699358602 80.863 2 -0.19603966274936668 0.04648583619992857 0.9438714419765777 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 100383 14835 SLNLYENQV True PC9_epitope_Rep5 1078.5294889633 1078.52838993586 62.065 2 -0.1960543166097392 0.04648583619992857 0.9438714419765777 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 80001 10938 PKEIHISV True PC9_epitope_Rep5 921.52836676449 921.52726993586 47.063 2 -0.19620061449190457 0.046540478562433034 0.9438714419765777 ['ENST00000528737.5_1_11:58911028-58911139:+|nuORF'] 56060 21794 LDLDCVQDLLG True PC9_epitope_Rep1 1202.58528958726 1202.5841899358602 88.651 2 -0.19626963146052925 0.046540478562433034 0.9438714419765777 ['KLHL26|p.V136L|1|0.36|ENSG00000167487|chr19:18667803-18667803|G/T|missense_variant'] 84185 6404 QESPGGLEA True H1975_Epitope_Rep3 886.4032258210199 886.40212993586 29.609 2 -0.19630692950199397 0.04657719634600203 0.9438714419765777 ['ARAP2-PDS5A|1|fusion', 'chr4:39825488-39837932|160|15.06|0.92|4.04|-|2|PDS5A,None|1', 'ENSG00000121892|ENST00000303538|PDS5A'] 86089 13883 QPQLPYSQA True PC9_epitope_Rep1 1030.5083595959 1030.5072699358602 58.24 2 -0.19636812433676826 0.04661216051123015 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 16905 4666 EGARAPQSI True PC9_epitope_Rep2 927.47739382079 927.47628993586 23.32 2 -0.19638283236152376 0.04661216051123015 0.9438714419765777 ['ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A', 'ENST00000475339.1_1_2:220085171-220086945:-|nuORF'] 15926 6247 EDSCFSFSKPP True H1975_Epitope_Rep3 1242.5226893307 1242.5210549037902 29.042 3 -0.1963970749494386 0.04661216051123015 0.9438714419765777 ['ARMC2|p.P116S|1|0.28|ENSG00000118690|chr6:108868878-108868878|C/T|missense_variant'] 63970 10900 LQAELEKAV True PC9_epitope_Rep4 999.5600608155898 999.55896993586 49.692 2 -0.19654126512940187 0.046667669059880464 0.9438714419765777 ['nc|ENSG00000168071|A6NC98-4|CCDC88B', 'ENSG00000168071|ENST00000356786|CCDC88B', 'ENST00000492980.1_1_11:64111011-64117377:+|nuORF', 'nc|ENSG00000168071|A6NC98-3|CCDC88B', 'ENST00000494566.5_1_11:64110218-64117194:+|nuORF', 'ENST00000494080.5_1_11:64109984-64120281:+|nuORF', 'nc|ENSG00000168071|A6NC98-2|CCDC88B', 'ENST00000463837.5_1_11:64107738-64120281:+|nuORF'] 116926 12705 TYPDVNNSI True PC9_epitope_Rep6 1021.4716397340101 1021.47107496793 60.348 1 -0.1965752608474146 0.04669648226097414 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 111273 10139 TLGVDFDSATP True H1975_Epitope_Rep2 1121.52406922969 1121.5229699358601 44.0 2 -0.19661851390417678 0.04669648226097414 0.9438714419765777 ['nc|ENSG00000129810|Q5FBB7-4|SGO1', 'nc|ENSG00000129810|Q5FBB7-2|SGO1'] 46807 23882 IVDPFQILV True PC9_epitope_Rep5 1042.60628273202 1042.6051899358602 96.844 2 -0.1966555933963926 0.04669648226097414 0.9438714419765777 ['nc|ENSG00000144034|Q9Y3C4-2|TPRKB', 'ENST00000489476.5_1_2:73956300-73964431:-|nuORF', 'ENST00000470012.1_1_2:73959253-73964442:-|nuORF', 'ENST00000497464.5_1_2:73957656-73964442:-|nuORF', 'ENST00000463231.5_1_2:73956300-73964442:-|nuORF', 'ENSG00000144034|ENST00000272424|TPRKB', 'nc|ENSG00000144034|Q9Y3C4-3|TPRKB'] 127735 17188 VRKEFFLL True NCI_RA007_Epitope_Rep4 1050.6226015025 1050.62150993586 74.429 2 -0.1966672091500542 0.04669648226097414 0.9438714419765777 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000480158.1_1_10:69714333-69714887:-|nuORF'] 74303 7920 NIKQISEVQ True PC9_epitope_Rep4 1057.57677350889 1057.57566993586 37.894 2 -0.1966777986212693 0.04669648226097414 0.9438714419765777 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 19202 12988 ELKQDNITV True PC9_epitope_Rep2 1058.56078909158 1058.5596899358602 55.246 2 -0.19671357646850676 0.04669648226097414 0.9438714419765777 ['AP3D1|p.A53T|1|0.13|ENSG00000065000|chr19:2138654-2138654|C/T|missense_variant'] 134029 7783 WPYLSPRRKSP True H1975_Epitope_Rep1 1385.75680355953 1385.75515490379 34.892 3 -0.19672224613284198 0.04669648226097414 0.9438714419765777 ['ENSG00000170264|ENST00000404929|FAM161A', 'nc|ENSG00000170264|Q3B820|FAM161A', 'nc|ENSG00000170264|Q3B820-2|FAM161A'] 96997 18513 SEVNLFLVP True NCI_RA007_Epitope_Rep5 1016.5542471591599 1016.55314993586 78.039 2 -0.19677885542014914 0.04669648226097414 0.9438714419765777 ['ENSG00000105771|ENST00000270066|SMG9', 'nc|ENSG00000105771|Q9H0W8-2|SMG9'] 75228 4819 NPKDNNQFASA True PC9_epitope_Rep3 1204.54726428576 1204.54616993586 23.632 2 -0.19680961270748953 0.04669648226097414 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 4961 19127 ALIESLLNTL True PC9_epitope_Rep5 1085.63322575585 1085.6321299358601 78.606 2 -0.19683360068448066 0.04669648226097414 0.9438714419765777 ['nc|ENSG00000174886|Q86Y39-2|NDUFA11'] 61995 23916 LLLQQMLQV True PC9_epitope_Rep1 1084.6314519340401 1084.63034993586 96.796 2 -0.1969039823707603 0.046733186763628164 0.9438714419765777 ['nc|ENSG00000165304|Q14680-3|MELK', 'nc|ENSG00000165304|Q14680-4|MELK', 'nc|ENSG00000165304|Q14680-5|MELK', 'nc|ENSG00000165304|Q14680-2|MELK', 'nc|ENSG00000165304|Q14680-8|MELK', 'nc|ENSG00000165304|Q14680-7|MELK', 'nc|ENSG00000165304|Q14680-6|MELK', 'ENSG00000165304|ENST00000298048|MELK'] 25590 6081 FESTSGVSA True H1975_Epitope_Rep3 883.3923267841499 883.39122993586 28.403 2 -0.19707091552057213 0.046751099252132736 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 117819 14568 VANKVYLL True PC9_epitope_Rep4 918.5538532363398 918.55274993586 63.954 2 -0.197111598236611 0.04676725352774281 0.9438714419765777 ['nc|ENSG00000257335|O43451-1|MGAM', 'MGAM|p.I1650Rfs*19|1|0.12|ENSG00000257335|chr7:142096359-142096360|AT/-|frameshift_variant', 'ENSG00000257335|ENST00000475668|MGAM', 'MGAM|p.P1236Lfs*2|1|0.5|ENSG00000257335|chr7:142058213-142058213|G/-|frameshift_variant'] 108987 8738 TEVGWFRNK True NCI_RA007_Epitope_Rep5 1135.57744221523 1135.5763499358602 40.277 2 -0.1971623201290729 0.04676725352774281 0.9438714419765777 ['ENST00000427183.6_1_2:242204008-242206250:-|nuORF'] 78046 4884 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 25.378 2 -0.19716475585234833 0.04676725352774281 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 75211 16400 NPEGLLNLV True H1975_Epitope_Rep3 967.53384606775 967.53329496793 68.556 1 -0.19721975679495246 0.046785164029912445 0.9438714419765777 ['nc|ENSG00000165185|Q8N8K9-2|KIAA1958'] 34654 17416 GQKNQLVAL True PC9_epitope_Rep3 969.5607295219298 969.55962993586 72.161 2 -0.19727579714615293 0.046821862728519625 0.9438714419765777 ['TMEM106B|p.E75K|2|0.35|ENSG00000106460|chr7:12218463-12218463|G/A|missense_variant'] 9672 14312 AYGSAVLTF True NCI_RA007_Epitope_Rep3 927.47018318203 927.46908993586 63.613 2 -0.19729709244493526 0.04683801149814001 0.9438714419765777 ['nc|ENSG00000179698|A6NE52-2|WDR97', 'ENSG00000179698|ENST00000323662|WDR97'] 58003 15554 LERALQASL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 64.652 2 -0.1973096769901716 0.04683801149814001 0.9438714419765777 ['RHBDD1|p.D284G|1|0.26|ENSG00000144468|chr2:226914346-226914346|A/G|missense_variant', 'ENST00000473218.5_1_2:227771569-227779114:+|nuORF', 'nc|ENSG00000144468|Q8TEB9-2|RHBDD1', 'ENST00000493526.1_1_2:227773206-227860235:+|nuORF', 'ENST00000491490.5_1_2:227771589-227860235:+|nuORF', 'ENSG00000144468|ENST00000392062|RHBDD1'] 54807 19251 LAFEGPILL True H1975_Epitope_Rep1 971.5691689473098 971.5686249679301 80.212 1 -0.19735365637493854 0.04683801149814001 0.9438714419765777 ['ENSG00000188994|ENST00000369577|ZNF292', 'ZNF292|p.S1288Pfs*23|1|0.24|ENSG00000188994|chr6:87257486-87257486|T/-|frameshift_variant'] 31174 9278 GDFC[Carbamidomethyl]IQVGR True H1975_Epitope_Rep3 1050.49166426537 1050.49056993586 40.682 2 -0.19739955995301517 0.046872064625211346 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'ENST00000511355.5_1_17:49238508-49238634:+|nuORF', 'NMT1-NME1|1|fusion'] 64216 12788 LQISTLEER True PC9_epitope_Rep3 1087.58733819259 1087.58624993586 54.21 2 -0.19744129237566738 0.046872064625211346 0.9438714419765777 ['ENSG00000172766|ENST00000379406|NAA16', 'nc|ENSG00000172766|Q6N069-5|NAA16', 'ENST00000476980.5_1_13:41885589-41929305:+|nuORF', 'nc|ENSG00000172766|Q6N069-4|NAA16', 'nc|ENSG00000172766|Q6N069-3|NAA16', 'nc|ENSG00000172766|Q6N069-2|NAA16'] 53755 12892 KYFDEHYEY True PC9_epitope_Rep3 1292.53496826656 1292.5338699358601 54.606 2 -0.19744456090732995 0.046872064625211346 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'CKS2|p.L52Rfs*9|1|0.33|ENSG00000123975|chr9:89315263-89315264|TC/-|frameshift_variant'] 78059 6455 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 29.804 2 -0.19748286807361645 0.046872064625211346 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 39223 14265 HLIGDFSKV True PC9_epitope_Rep1 1014.54983048506 1014.54872993586 59.694 2 -0.19757324471173815 0.046926660655244964 0.9438714419765777 ['nc|ENSG00000158402|P30307-4|CDC25C', 'nc|ENSG00000158402|P30307-3|CDC25C', 'nc|ENSG00000158402|P30307-2|CDC25C', 'ENSG00000158402|ENST00000323760|CDC25C'] 15294 13770 EAIEAILA True H1975_Epitope_Rep2 828.4592841451599 828.45818993586 58.112 2 -0.19757526123055555 0.046926660655244964 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 127173 8080 VQEYGELDAKG True H1975_Epitope_Rep3 1207.5720820512695 1207.57098993586 36.054 2 -0.19790450537663562 0.047000037569974076 0.9438714419765777 ['ENST00000519902.1_1_8:26237308-26237995:-|nuORF'] 31086 13226 GAYGTMTYL True H1975_Epitope_Rep3 975.4371688015899 975.43661496793 56.129 1 -0.19791734540848874 0.047000037569974076 0.9438714419765777 ['ENSG00000044446|ENST00000379942|PHKA2', 'ENST00000473597.1_1_X:18911605-18913336:-|nuORF', 'ENST00000469485.5_1_X:18911605-18915466:-|nuORF'] 32117 8477 GEYKIMVA True NCI_RA007_Epitope_Rep5 909.4629896266099 909.46188993586 39.29 2 -0.19794713667548572 0.047017056127432566 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000595467.1_1_19:36037522-36037810:+|nuORF'] 8190 8382 ATGIILPAR True NCI_RA007_Epitope_Rep4 910.5600012459399 910.55890993586 39.055 2 -0.1979650453227316 0.047017056127432566 0.9438714419765777 ['ENSG00000163909|ENST00000372852|HEYL'] 10814 6853 DAGDPAVEA True H1975_Epitope_Rep3 843.36102665587 843.36047496793 31.319 1 -0.1979679527823903 0.04703407340621361 0.9438714419765777 ['ENSG00000141002|ENST00000263346|TCF25', 'ENST00000570116.6_1_16:89971082-89977643:+|nuORF', 'ENST00000563484.1_1_16:89971421-89975542:+|nuORF'] 37871 13590 HEAASATLTI True PC9_epitope_Rep4 1012.5189242796 1012.51782993586 60.167 2 -0.19797465316061771 0.04703407340621361 0.9438714419765777 ['OMG|p.A350S|1|0.03|ENSG00000126861|chr17:31295284-31295284|C/A|missense_variant'] 26318 14759 FIEGKINTVP True PC9_epitope_Rep3 1116.61791004488 1116.6168099358601 61.907 2 -0.19807871694586338 0.047051973177557806 0.9438714419765777 ['ENST00000547068.5_1_14:34145504-34150054:+|nuORF'] 112047 15171 TLTDITVVC True H1975_Epitope_Rep3 963.49468367771 963.4941349679301 63.757 1 -0.19818187240483373 0.04708511757193299 0.9438714419765777 ['ENST00000434365.1_1_X:114937583-114938135:+|nuORF'] 123493 15147 VIGPPVVL True H1975_Epitope_Rep2 792.5109257952 792.51037496793 63.417 1 -0.198227464100639 0.04708511757193299 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 16873 13219 EFVQQAQSL True PC9_epitope_Rep1 1048.5189242795998 1048.5178299358602 55.71 2 -0.19823338562043205 0.04708511757193299 0.9438714419765777 ['ENSG00000164244|ENST00000296666|PRRC1', 'nc|ENSG00000164244|Q96M27-3|PRRC1', 'nc|ENSG00000164244|Q96M27-2|PRRC1'] 64290 6180 LQLSPHQIQA True NCI_RA007_Epitope_Rep1 1133.6193070272102 1133.61820993586 28.074 2 -0.19825880215822989 0.04708511757193299 0.9438714419765777 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 48731 6473 KENSHFFVA True H1975_Epitope_Rep2 1077.5243440132099 1077.5232499358601 29.815 2 -0.1982661823363795 0.04708511757193299 0.9438714419765777 ['ENSG00000124659|ENST00000372876|TBCC'] 41531 7813 IDCFRRVP True NCI_RA007_Epitope_Rep3 1004.5225701914 1004.52146993586 37.851 2 -0.19849676509385866 0.047139691244412724 0.9438714419765777 ['nc|ENSG00000167984|Q7RTR2-3|NLRC3'] 64110 7658 LQEELAKLSEK True NCI_RA007_Epitope_Rep1 1286.7081816012599 1286.70652490379 33.781 3 -0.1985432073761925 0.047139691244412724 0.9438714419765777 ['ENST00000473581.5_1_X:48834665-48847670:-|nuORF', 'nc|ENSG00000068400|Q4V328-2|GRIPAP1', 'nc|ENSG00000068400|Q4V328-4|GRIPAP1', 'ENSG00000068400|ENST00000376423|GRIPAP1'] 68780 7677 LVDPNHSGLVT True H1975_Epitope_Rep1 1150.59823722946 1150.5971499358602 34.497 2 -0.1986290063310131 0.047195147144440064 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF'] 33452 6238 GLGLEPTA True H1975_Epitope_Rep3 756.40176926904 756.40122496793 29.006 1 -0.19868416703842093 0.04721038102570844 0.9438714419765777 ['ENSG00000167378|ENST00000422989|IRGQ'] 131595 9945 VVWQRRHAR True PC9_epitope_Rep3 1206.68464167878 1206.6829949037901 43.207 3 -0.19868471448250116 0.04721038102570844 0.9438714419765777 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 78045 4799 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 25.033 2 -0.19868568143819712 0.04721038102570844 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 97241 17091 SFMALSQDIQK True PC9_epitope_Rep5 1266.62782310558 1266.62672993586 70.762 2 -0.19871780626335547 0.04721038102570844 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 13320 15327 DLYSQISSV True PC9_epitope_Rep3 1010.4920408254201 1010.49094993586 64.111 2 -0.19877075568026614 0.04724705175392473 0.9438714419765777 ['ENST00000566590.5_1_16:8807641-8875284:+|nuORF', 'ENSG00000183044|ENST00000268251|ABAT', 'ENST00000565671.1_1_16:8839919-8854000:+|nuORF'] 107360 12464 SYSGTFHSL True PC9_epitope_Rep3 997.4505103666099 997.44940993586 52.967 2 -0.19892219336094116 0.047332945307072716 0.9438714419765777 ['ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1'] 12573 12604 DLDNDLMKY True H1975_Epitope_Rep2 1125.50122561013 1125.50012993586 53.578 2 -0.19895040247377563 0.047332945307072716 0.9438714419765777 ['ENSG00000119650|ENST00000314067|IFT43', 'nc|ENSG00000119650|Q96FT9-2|IFT43', 'ENST00000554026.5_1_14:76548780-76549917:+|nuORF'] 99037 4188 SKTPPQRPPPQ True NCI_RA007_Epitope_Rep2 1231.66731984879 1231.66567490379 20.93 3 -0.1989546328706854 0.047332945307072716 0.9438714419765777 ['ENSG00000157152|ENST00000621198|SYN2', 'nc|ENSG00000157152|Q92777-2|SYN2'] 17846 12426 EIAQDFKTDLR True PC9_epitope_Rep3 1334.68302948258 1334.6813849037899 52.823 3 -0.19895735495202296 0.047332945307072716 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 35229 4654 GSHSMRYFS True NCI_RA007_Epitope_Rep3 1070.4603638576598 1070.4592699358602 25.23 2 -0.1989674766018419 0.047332945307072716 0.9438714419765777 ['nc|ENSG00000204632|P17693-5|HLA-G', 'ENSG00000204632|ENST00000360323|HLA-G', 'nc|ENSG00000204632|P17693-4|HLA-G', 'nc|ENSG00000204632|P17693-6|HLA-G', 'nc|ENSG00000204632|P17693-2|HLA-G', 'nc|ENSG00000204632|P17693-7|HLA-G', 'nc|ENSG00000204632|P17693-3|HLA-G'] 125138 19887 VLPSEPLNL True PC9_epitope_Rep2 980.5542471591599 980.55314993586 81.888 2 -0.19898539465569856 0.047332945307072716 0.9438714419765777 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 66129 8226 LSPATTYY True NCI_RA007_Epitope_Rep5 914.43854870058 914.43744993586 38.32 2 -0.1990059932541081 0.047332945307072716 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 29182 16924 FVADGIFK True PC9_epitope_Rep1 895.4803539429099 895.47924993586 69.923 2 -0.19902391891479274 0.047332945307072716 0.9438714419765777 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 83062 20724 PYLFPVAA True PC9_epitope_Rep4 876.4745402864799 876.47344993586 87.879 2 -0.19904776260573287 0.047332945307072716 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 99070 12692 SLAACVLTS True NCI_RA007_Epitope_Rep2 863.4422541820301 863.44170496793 53.985 1 -0.19908536929210682 0.047366938890453396 0.9438714419765777 ['ENSG00000140519|ENST00000268122|RHCG', 'ENST00000558184.1_1_15:90021028-90029524:-|nuORF'] 72472 16700 MVADKFTEL True PC9_epitope_Rep1 1052.52123277872 1052.52012993586 69.065 2 -0.19911442949588398 0.047366938890453396 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant'] 137734 12379 YNGAVEAI True PC9_epitope_Rep3 835.4075829254699 835.40648993586 52.644 2 -0.19911891981200813 0.047366938890453396 0.9438714419765777 ['ENSG00000135917|ENST00000644224|SLC19A3'] 109591 8295 THDDSHLVSL True PC9_epitope_Rep6 1122.5305515924601 1122.5294499358602 41.523 2 -0.19920163302798738 0.047366938890453396 0.9438714419765777 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 73749 6642 NHANGLTL True PC9_epitope_Rep6 838.4297153523801 838.42860993586 34.277 2 -0.1992387646899466 0.04738482333946607 0.9438714419765777 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 5568 11844 ANLSEQQI True PC9_epitope_Rep3 901.4505103666099 901.44940993586 50.577 2 -0.1992471423277456 0.04740270711697674 0.9438714419765777 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1', 'ENST00000478291.1_1_3:184049262-184049734:+|nuORF', 'ENST00000460829.5_1_3:184046782-184052693:+|nuORF'] 78262 5510 PARLPAAPA True PC9_epitope_Rep4 862.5024863698198 862.50138993586 27.953 2 -0.1992845356588609 0.0474205902230232 0.9438714419765777 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 129110 10964 VTCAYTTPGP True PC9_epitope_Rep1 1008.4586325221599 1008.45752993586 47.061 2 -0.1994055951680782 0.04743580117134705 0.9438714419765777 ['nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2'] 130099 8218 VTQVADGSLIN True H1975_Epitope_Rep3 1115.5822528121498 1115.5811499358601 36.593 2 -0.1994156026864706 0.04743580117134705 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENST00000469614.1_1_7:4828357-4829561:+|nuORF', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 106399 19179 SVTDLAFKV True PC9_epitope_Rep5 978.5385970950199 978.53750993586 78.809 2 -0.19943701578522752 0.04743580117134705 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'ENST00000459625.5_1_12:48179068-48183703:-|nuORF', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7'] 117080 21162 TYQVLAVTF True PC9_epitope_Rep4 1040.5542471591598 1040.55367496793 89.563 1 -0.19944541396876073 0.04743580117134705 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40', 'ENST00000474025.1_1_1:31744094-31762265:-|nuORF', 'ENST00000489853.1_1_1:31732921-31754364:-|nuORF'] 8565 18405 AVAAVLTQV True PC9_epitope_Rep3 870.5174677276199 870.51636993586 76.002 2 -0.19951223013895195 0.047488550191455814 0.9438714419765777 ['nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'ENST00000378892.5_1_9:34637493-34637721:-|nuORF', 'nc|ENSG00000147955|Q99720-4|SIGMAR1', 'ENST00000497006.1_1_9:34637208-34637655:-|nuORF', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1'] 103774 13304 SRFPEALRL True PC9_epitope_Rep6 1087.61382772395 1087.6127299358602 62.829 2 -0.199532709194182 0.047488550191455814 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 66454 14387 LSRQLQVL True PC9_epitope_Rep2 955.58146496651 955.58036993586 60.601 2 -0.1995563161139041 0.047488550191455814 0.9438714419765777 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 94238 12186 RWRKRWRWRRY True NCI_RA007_Epitope_Rep2 1804.0134612214297 1804.01236993586 51.999 2 -0.19955801955369318 0.047488550191455814 0.9438714419765777 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 44814 19326 IPVMLTGP True PC9_epitope_Rep1 826.46226135062 826.46116993586 79.143 2 -0.1996637419320188 0.04750553699463193 0.9438714419765777 ['ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 116965 14295 TYPKIWVKV True PC9_epitope_Rep4 1132.66446631448 1132.66282490379 62.887 3 -0.19966926361270088 0.04750553699463193 0.9438714419765777 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 133355 5437 WFFFQRHKLK True NCI_RA007_Epitope_Rep2 1435.7877097649896 1435.78606490379 25.768 3 -0.19976242864074548 0.04752252252252252 0.9438714419765777 ['ENSG00000174567|ENST00000308302|GOLT1A'] 44086 17615 ILLRQGEVEKL True PC9_epitope_Rep5 1296.7765359445996 1296.77488490379 72.765 3 -0.19977422541300552 0.04752252252252252 0.9438714419765777 ['ENST00000426448.1_1_22:20804701-20805505:+|nuORF'] 14301 8416 DTDAQQAFKY True H1975_Epitope_Rep2 1185.5302172392899 1185.52912993586 37.327 2 -0.19979810494231393 0.04754039901653497 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 62504 19024 LLSRRWVL True PC9_epitope_Rep2 1041.64473392941 1041.6436299358602 78.541 2 -0.19986408610013998 0.0475573822795263 0.9438714419765777 ['ENSG00000215148|ENST00000399677|PRSS41', 'nc|ENSG00000215148|Q7RTY9|PRSS41'] 135722 4156 YEKDDKLTP True NCI_RA007_Epitope_Rep4 1107.54480467427 1107.54370993586 22.279 2 -0.19987952697121716 0.0475573822795263 0.9438714419765777 ['ENSG00000092820|ENST00000367075|EZR'] 56949 7353 LEDVLESK True NCI_RA007_Epitope_Rep1 931.48622716899 931.48512993586 32.595 2 -0.19991493941196908 0.04757525711282937 0.9438714419765777 ['nc|ENSG00000141013|O95995-2|GAS8', 'ENSG00000141013|ENST00000268699|GAS8', 'ENST00000564789.5_1_16:90106452-90109750:+|nuORF', 'ENST00000569558.5_1_16:90103573-90109750:+|nuORF'] 117484 21919 VAEGVLMTSL True PC9_epitope_Rep1 1018.53688284286 1018.53578993586 89.128 2 -0.19994033546519446 0.04758955882076976 0.9438714419765777 ['ENST00000416880.5_1_3:42610473-42623377:-|nuORF'] 110985 22575 TLDDLIAAV True PC9_epitope_Rep1 929.50696261357 929.50586993586 91.641 2 -0.1999429831703247 0.04758955882076976 0.9438714419765777 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1', 'ENST00000462121.1_1_5:139876268-139877642:+|nuORF'] 3781 13113 AGVDLNDS True NCI_RA007_Epitope_Rep1 789.35046197217 789.3499149679301 55.002 1 -0.19996924766195992 0.04758955882076976 0.9438714419765777 ['ENST00000609111.1_1_10:88727834-88728308:-|nuORF'] 55954 6948 LDHVIVTD True NCI_RA007_Epitope_Rep2 910.47599683846 910.47488993586 31.646 2 -0.20003969869359398 0.04758955882076976 0.9438714419765777 ['ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1'] 56006 15943 LDIYASQVT True PC9_epitope_Rep2 1008.5127762699999 1008.51166993586 66.573 2 -0.20007094051783017 0.04758955882076976 0.9438714419765777 ['ENST00000508041.1_1_3:134332031-134343939:-|nuORF', 'nc|ENSG00000174611|Q8NBH2-3|KY', 'ENSG00000174611|ENST00000423778|KY'] 44808 3990 IPVEQKEGA True PC9_epitope_Rep5 969.5131106231698 969.51200993586 20.426 2 -0.2001521361547394 0.0476244089169106 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 52865 16153 KREEHQRWYEK True H1975_Epitope_Rep1 1587.7906228689496 1587.7895299358602 67.478 2 -0.2002018953559954 0.0476244089169106 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 22104 8562 ESVMCYCPP True H1975_Epitope_Rep2 1027.38131080159 1027.3802099358602 37.887 2 -0.2002055198517501 0.0476244089169106 0.9438714419765777 ['ENST00000434470.1_1_10:1081386-1081849:+|nuORF'] 103773 13212 SRFPEALRL True PC9_epitope_Rep6 1087.61382772395 1087.6127299358602 62.469 2 -0.20021805668135575 0.0476422794738521 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 78575 10968 PDRAYDAV True PC9_epitope_Rep1 905.4242956187699 905.42318993586 47.077 2 -0.20025767719522825 0.04769678206210714 0.9438714419765777 ['ENSG00000128266|ENST00000615612|GNAZ'] 14253 3848 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 21.041 2 -0.2002631211942615 0.04769678206210714 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 9071 10857 AVKALVSSV True PC9_epitope_Rep1 872.53311779176 872.53202993586 46.647 2 -0.200348776440168 0.047747697041331305 0.9438714419765777 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 58640 8267 LFGGLCFRFRD True NCI_RA007_Epitope_Rep1 1329.6652116738098 1329.66410993586 36.155 2 -0.20035333410933773 0.047747697041331305 0.9438714419765777 ['nc|ENSG00000102226|P51784|USP11'] 5851 7131 APGKGILAA True PC9_epitope_Rep2 796.4806882960798 796.47958993586 32.824 2 -0.20037822256304055 0.047747697041331305 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 106218 16595 SVPNKDVFQEL True PC9_epitope_Rep4 1274.65066672514 1274.6495699358602 71.808 2 -0.2004062780880203 0.047747697041331305 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 122433 9403 VGSKSQDVSL True PC9_epitope_Rep4 1018.5294889633 1018.52838993586 43.777 2 -0.20041185233913753 0.047747697041331305 0.9438714419765777 ['nc|ENSG00000102385|Q13474-2|DRP2', 'ENSG00000102385|ENST00000395209|DRP2'] 113836 11886 TREEGTPLTL True PC9_epitope_Rep2 1115.5822528121498 1115.58167496793 51.043 1 -0.20041827992842706 0.047747697041331305 0.9438714419765777 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF'] 113442 14779 TQNPNYYNL True PC9_epitope_Rep4 1125.5090878718902 1125.50798993586 64.778 2 -0.20045052411389908 0.04776556226783235 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 27760 7652 FQEDSRSTL True PC9_epitope_Rep1 1081.50400249145 1081.50290993586 34.256 2 -0.20050131878863509 0.04778342682400615 0.9438714419765777 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'PRR14L|p.P1996Qfs*42|1|0.37|ENSG00000183530|chr22:31703563-31703563|G/-|frameshift_variant', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 33483 8890 GLGRPKRERR True NCI_RA007_Epitope_Rep5 1223.7323201471897 1223.73067490379 40.858 3 -0.20053249071969162 0.047793221165569374 0.9438714419765777 ['ENSG00000169551|ENST00000276241|CT55'] 82164 9356 PTEDELSLP True H1975_Epitope_Rep2 999.4760564081099 999.47547496793 40.949 1 -0.20055343483655716 0.047793221165569374 0.9438714419765777 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 101755 6071 SPHPGLVAA True PC9_epitope_Rep2 847.4552018242299 847.45410993586 28.747 2 -0.20057538152410062 0.047793221165569374 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300'] 11175 5485 DEHRLKYQCFK True NCI_RA007_Epitope_Rep2 1465.7136184182098 1465.71196490379 25.953 3 -0.20058540888466586 0.047793221165569374 0.9438714419765777 ['ENSG00000198018|ENST00000370489|ENTPD7'] 107370 13856 SYSMIVNNL True NCI_RA007_Epitope_Rep3 1039.50083168731 1039.4997299358602 61.831 2 -0.20058726177330674 0.047793221165569374 0.9438714419765777 ['CACYBP-RABGAP1L|4|fusion', 'nc|ENSG00000116161|Q9HB71-3|CACYBP', 'CACYBP-RABGAP1L|3|fusion', 'CACYBP-RABGAP1L|2|fusion', 'ENSG00000116161|ENST00000367679|CACYBP', 'ENST00000473925.1_1_1:174969094-174977843:+|nuORF', 'CACYBP-RABGAP1L|1|fusion', 'ENST00000469173.1_1_1:174976108-174977843:+|nuORF'] 113143 17215 TQAPPSVIL True PC9_epitope_Rep4 924.5280324113199 924.52692993586 74.226 2 -0.20067335400503808 0.047793221165569374 0.9438714419765777 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant'] 38114 7012 HEPEPHIL True PC9_epitope_Rep4 970.4872302285 970.48612993586 34.219 2 -0.200678591882361 0.047793221165569374 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 32229 17923 GFGGDFDG True PC9_epitope_Rep1 770.28713343962 770.28658496793 73.733 1 -0.20069114545009054 0.047793221165569374 0.9438714419765777 ['ENSG00000015413|ENST00000690203|DPEP1'] 44575 20118 IPFGITEEA True PC9_epitope_Rep3 975.49131254943 975.49020993586 82.635 2 -0.20069536138076613 0.047793221165569374 0.9438714419765777 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 27252 19459 FLWHNMKLP True PC9_epitope_Rep2 1184.6164705762399 1184.6153699358601 80.23 2 -0.2007088835909576 0.047793221165569374 0.9438714419765777 ['ENSG00000183751|ENST00000568546|TBL3'] 135647 8485 YEEWAERRLQA True H1975_Epitope_Rep3 1449.7000765290497 1449.69896993586 37.623 2 -0.20076064800294402 0.04781108151704993 0.9438714419765777 ['ENSG00000143515|ENST00000368489|ATP8B2', 'nc|ENSG00000143515|P98198|ATP8B2', 'nc|ENSG00000143515|P98198-3|ATP8B2'] 136722 10224 YILENRPP True PC9_epitope_Rep4 1000.5341804209199 1000.53308993586 47.004 2 -0.20083623882316384 0.04782804411433716 0.9438714419765777 ['nc|ENSG00000240764|Q9Y5F6-2|PCDHGC5', 'ENSG00000240764|ENST00000252087|PCDHGC5'] 20631 16733 EQFHQFLEA True PC9_epitope_Rep1 1147.52982331647 1147.5287299358602 69.191 2 -0.20085774641143606 0.04782804411433716 0.9438714419765777 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF'] 96557 12533 SELPIVTPA True H1975_Epitope_Rep2 925.51204799401 925.51149496793 53.302 1 -0.20086947503448702 0.04784590280773487 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2'] 56830 6797 LEDATHIALR True NCI_RA007_Epitope_Rep2 1137.61422164677 1137.6131299358601 31.056 2 -0.20093045300953113 0.047861067871945384 0.9438714419765777 ['ENST00000493555.5_1_1:118439453-118462815:-|nuORF', 'nc|ENSG00000196505|Q9NXN4-2|GDAP2', 'ENSG00000196505|ENST00000369443|GDAP2'] 30640 13399 GALEPHINAQI True PC9_epitope_Rep4 1161.61422164677 1161.6131299358601 59.44 2 -0.2009837526741392 0.047861067871945384 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 30123 10520 FYQEHPDL True PC9_epitope_Rep4 1047.4661604307498 1047.4650699358601 48.189 2 -0.20099436549073643 0.047861067871945384 0.9438714419765777 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000585223.1_1_17:62500698-62502378:-|nuORF'] 106217 16498 SVPNKDVFQEL True PC9_epitope_Rep4 1274.65066672514 1274.6495699358602 71.43 2 -0.20100272505663225 0.047861067871945384 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 108259 15255 TEAPPIIFA True H1975_Epitope_Rep3 957.5171333744499 957.51602993586 64.085 2 -0.20102879081614983 0.04787892427140768 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 17849 10262 EIAQDFKTDLR True PC9_epitope_Rep6 1334.68302948258 1334.6813849037899 50.151 3 -0.20122054252502306 0.0479342872681582 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENST00000401004.2_1:120904811-120905087:+|nuORF', 'ENST00000586518.1_1_17:73774674-73775034:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF'] 529 5864 AAPTRHPIHIK True NCI_RA007_Epitope_Rep5 1239.72002412799 1239.71836490379 29.241 3 -0.20133276229094857 0.04794674667166698 0.9438714419765777 ['ENSG00000164399|ENST00000296870|IL3'] 3049 14564 AFVYLRQPY True PC9_epitope_Rep5 1155.6076797143498 1155.60604490379 61.019 3 -0.20133682387334964 0.04794674667166698 0.9438714419765777 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 10924 6126 DAVKYNPAI True PC9_epitope_Rep4 989.5181960036099 989.51708993586 30.576 2 -0.20135069377107767 0.04794674667166698 0.9438714419765777 ['C8B|p.Q457K|1|0.32|ENSG00000021852|chr1:56940878-56940878|G/T|missense_variant'] 22107 17013 ESVNLIYSF True NCI_RA007_Epitope_Rep5 1070.5284263341398 1070.52732993586 72.203 2 -0.20135794466360973 0.04794674667166698 0.9438714419765777 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|134|1|anti-sense'] 99726 11174 SLGGYSLSV True H1975_Epitope_Rep2 881.44944773745 881.4488949679301 48.019 1 -0.20136857083280055 0.04794674667166698 0.9438714419765777 ['ENSG00000125508|ENST00000217188|SRMS', 'SRMS|p.R161Q|1|0.18|ENSG00000125508|chr20:63543477-63543477|C/T|missense_variant'] 118933 19090 VEERNLLSV True PC9_epitope_Rep3 1057.57677350889 1057.57566993586 78.653 2 -0.20139233324164077 0.04794674667166698 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 78057 6249 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 29.015 2 -0.201554079636517 0.04794674667166698 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 89158 23663 REHLNYWYS True NCI_RA007_Epitope_Rep3 1266.57817049122 1266.57652490379 102.61 3 -0.20163149562557983 0.04800210009187902 0.9438714419765777 ['nc|ENSG00000172350|Q9H172-4|ABCG4', 'nc|ENSG00000172350|Q9H172-3|ABCG4', 'nc|ENSG00000172350|Q9H172-2|ABCG4', 'ENSG00000172350|ENST00000619701|ABCG4', 'ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'ENST00000496783.1_1_21:43708308-43714771:+|nuORF', 'nc|ENSG00000160179|P45844-8|ABCG1', 'ENST00000472587.5_1_21:43696971-43716499:+|nuORF'] 63916 20397 LPWAPAGVAA True PC9_epitope_Rep3 951.5178020807898 951.5172549679301 83.708 1 -0.20169791093717754 0.04801995049876247 0.9438714419765777 ['nc|ENSG00000166448|Q8N3G9-3|TMEM130', 'ENSG00000166448|ENST00000339375|TMEM130', 'nc|ENSG00000166448|Q8N3G9|TMEM130'] 114865 10301 TTDNANIL True PC9_epitope_Rep6 860.4239612656 860.42286993586 50.312 2 -0.2017607538251416 0.04803599887503515 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10'] 13568 4688 DPNSEKCNCY True H1975_Epitope_Rep2 1171.42740904687 1171.42576490379 23.127 3 -0.20192565258944267 0.04803599887503515 0.9438714419765777 ['nc|ENSG00000196277|Q14831-5|GRM7'] 47031 7551 IVSEKSRYSL True H1975_Epitope_Rep1 1180.6451874218799 1180.6440899358602 34.037 2 -0.20211886851234628 0.04803599887503515 0.9438714419765777 ['ENSG00000163686|ENST00000478253|ABHD6'] 99814 10729 SLGSVQAP True PC9_epitope_Rep2 757.3970182417698 757.39592993586 46.588 2 -0.202161184762966 0.04805204544602347 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000453838.2_1_1:182929095-182929497:-|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 36279 12452 GVGLSSYL True H1975_Epitope_Rep3 794.4174193331801 794.4168749679301 53.089 1 -0.20225258784707523 0.04805204544602347 0.9438714419765777 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 77738 6553 PAAPAVSQA True PC9_epitope_Rep3 810.4235673427801 810.42246993586 30.233 2 -0.20229515965322445 0.04805204544602347 0.9438714419765777 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 86947 10020 QRTKQEVL True PC9_epitope_Rep3 1000.5665431783598 1000.56544993586 43.498 2 -0.20231935321207606 0.04806989257391402 0.9438714419765777 ['ENST00000462159.1_1_1:100573356-100598412:-|nuORF', 'ENSG00000156876|ENST00000287482|SASS6'] 36320 14822 GVGTSLLSTL True PC9_epitope_Rep3 946.53351171458 946.53240993586 62.149 2 -0.20235657993865164 0.048087739032620924 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'NCOA3|p.K620Nfs*18|1|0.15|ENSG00000124151|chr20:47636241-47636241|A/-|frameshift_variant'] 46445 19090 ITLRDEISI True PC9_epitope_Rep3 1058.5971746003 1058.5960699358602 78.653 2 -0.20237873445509202 0.04810378118965938 0.9438714419765777 ['nc|ENSG00000148297|Q15528-2|MED22', 'ENSG00000148297|ENST00000343730|MED22'] 62520 12567 LLSTVAELIY True H1975_Epitope_Rep1 1120.63797678312 1120.6368699358602 53.385 2 -0.20242603000850623 0.04810378118965938 0.9438714419765777 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|141|2|anti-sense'] 32585 7013 GHASVVNTL True PC9_epitope_Rep4 896.47158016436 896.47048993586 34.222 2 -0.20251888497406695 0.04810378118965938 0.9438714419765777 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 89226 3767 REIQVQHPAA True H1975_Epitope_Rep2 1147.60980497267 1147.6087099358601 19.496 2 -0.20255978324959534 0.04814037192561488 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'ENST00000368256.3_1_1:156302875-156308050:-|nuORF'] 55024 22124 LALAIYTGV True PC9_epitope_Rep1 919.53786881903 919.53676993586 89.912 2 -0.20257849558355698 0.04815099432084419 0.9438714419765777 ['ENSG00000105370|ENST00000596399|LIM2', 'nc|ENSG00000105370|P55344-2|LIM2'] 80408 9047 PLISRFMERNP True H1975_Epitope_Rep3 1358.7128901422197 1358.71123490379 39.787 3 -0.20258961359475283 0.04815099432084419 0.9438714419765777 ['ENSG00000162877|ENST00000367136|PM20D1'] 127584 13878 VQYEGNINV True PC9_epitope_Rep4 1034.50327421546 1034.5021699358601 61.282 2 -0.2025922939488726 0.04815099432084419 0.9438714419765777 ['nc|ENSG00000166750|Q08AF3-2|SLFN5', 'SLFN5|p.A869Pfs*19|1|0.14|ENSG00000166750|chr17:35265814-35265814|G/-|frameshift_variant', 'ENSG00000166750|ENST00000299977|SLFN5'] 74342 19316 NIPVHLPNI True PC9_epitope_Rep2 1015.58146496651 1015.58036993586 79.673 2 -0.20267119211829876 0.04815099432084419 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 80601 18952 PLPEFSAV True PC9_epitope_Rep6 858.4487194614599 858.44762993586 85.545 2 -0.20267663701384608 0.04815099432084419 0.9438714419765777 ['PRAM1|p.G65S|1|0.19|ENSG00000133246|chr19:8499615-8499615|C/T|missense_variant'] 133921 17067 WNPRRWWRWCW True PC9_epitope_Rep5 1730.8153385785 1730.81424993586 70.668 2 -0.20275757977274295 0.04815099432084419 0.9438714419765777 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 47793 7702 IYQRHVYNL True PC9_epitope_Rep4 1204.6352914445197 1204.6336349037902 37.012 3 -0.20278407798880038 0.04815099432084419 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 91569 16014 RPALPVSYLQA True PC9_epitope_Rep6 1213.68190728377 1213.68080993586 73.919 2 -0.20280623153828106 0.04815099432084419 0.9438714419765777 ['ENSG00000167615|ENST00000326764|LENG8'] 13397 10135 DNIQTVKRLRT True PC9_epitope_Rep5 1342.7680965192199 1342.76644490379 43.969 3 -0.20284616482993803 0.04815099432084419 0.9438714419765777 59611 10456 LGSFGRELHLP True H1975_Epitope_Rep2 1224.6615061923599 1224.6604099358601 45.234 2 -0.20289468896653345 0.048167931777715306 0.9438714419765777 ['ENST00000359232.7_1_14:100758430-100758577:-|nuORF'] 105028 4520 STIKEVAQA True PC9_epitope_Rep6 945.5131106231698 945.51200993586 24.617 2 -0.20292176376362694 0.048167931777715306 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 57502 5881 LEKNDSQNLP True H1975_Epitope_Rep2 1156.57241640444 1156.5713099358602 27.607 2 -0.2029523059823858 0.0481857710473049 0.9438714419765777 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.K1222Rfs*34|1|0.12|ENSG00000104237|chr8:54627546-54627547|-/GG|frameshift_variant'] 39929 14581 HQLTEVGTMNI True PC9_epitope_Rep4 1241.60742201417 1241.60632993586 64.004 2 -0.20303490912707237 0.04823928484416874 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 78058 6357 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 29.428 2 -0.20304034402310076 0.04823928484416874 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 112813 8590 TPLSLKRPP True H1975_Epitope_Rep1 1007.6127650947899 1007.61166993586 37.97 2 -0.20309569304137462 0.04823928484416874 0.9438714419765777 ['ENSG00000144460|ENST00000272907|NYAP2', 'nc|ENSG00000144460|Q9P242|NYAP2'] 125403 4668 VLTEVDGK True NCI_RA007_Epitope_Rep5 859.4650978015899 859.46400993586 24.639 2 -0.2031754865342896 0.04827586206896552 0.9438714419765777 ['ENSG00000150656|ENST00000358821|CNDP1'] 136495 15995 YHISLEHEIL True PC9_epitope_Rep4 1252.64518742188 1252.6440899358602 69.458 2 -0.20327281333749542 0.04829188763750164 0.9438714419765777 ['ENSG00000168002|ENST00000301788|POLR2G', 'POLR2G|p.N124Tfs*13|1|0.17|ENSG00000168002|chr11:62765374-62765374|C/-|frameshift_variant'] 92634 11005 RRFKWAIEL True NCI_RA007_Epitope_Rep1 1217.7033114346898 1217.70166490379 46.8 3 -0.20327987479711015 0.04829188763750164 0.9438714419765777 ['nc|ENSG00000128463|Q5J8M3-3|EMC4', 'ENST00000557941.1_1_15:34517315-34518058:+|nuORF', 'nc|ENSG00000128463|Q5J8M3-2|EMC4', 'ENSG00000128463|ENST00000267750|EMC4'] 139031 19264 YSIKYNNQL True PC9_epitope_Rep5 1141.57677350889 1141.57566993586 79.141 2 -0.2033497466246126 0.04829188763750164 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 13156 19929 DLSTSDEDDLY True H1975_Epitope_Rep1 1271.50412163075 1271.50302993586 82.942 2 -0.2034951836500167 0.04832846113484746 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 78030 5560 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 26.217 2 -0.20354444222524695 0.04834538844957464 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 104388 10200 SSGPADLGWA True H1975_Epitope_Rep2 959.4348603024699 959.43431496793 44.238 1 -0.20357366117854953 0.04834538844957464 0.9438714419765777 ['ENST00000445369.2_1_16:3063604-3064486:+|nuORF'] 28049 15086 FRDAFTQEL True PC9_epitope_Rep6 1125.54547338061 1125.54436993586 70.085 2 -0.20359426681810602 0.04836050215476859 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 78491 7147 PDEVARRWGER True NCI_RA007_Epitope_Rep2 1369.6850951712497 1369.68343490379 32.422 3 -0.2035985236015463 0.04836050215476859 0.9438714419765777 ['nc|ENSG00000151702|Q01543-3|FLI1', 'ENSG00000151702|ENST00000527786|FLI1', 'ENST00000528790.1_1_11:128676959-128680880:+|nuORF', 'nc|ENSG00000151702|Q01543-4|FLI1', 'nc|ENSG00000151702|Q01543-2|FLI1', 'nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG', 'ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG'] 100167 10247 SLLEQDLAT True H1975_Epitope_Rep2 988.5076908895599 988.50658993586 44.42 2 -0.20361347091278129 0.04836050215476859 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'ENST00000488203.1_1_12:120221699-120241095:-|nuORF'] 101619 16383 SPFGSITSA True PC9_epitope_Rep2 865.4181476091701 865.41704993586 68.264 2 -0.2036253986689393 0.04836050215476859 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 68990 17640 LVGPVLGAA True PC9_epitope_Rep3 795.4854393233499 795.48489496793 73.043 1 -0.20367191950484795 0.04839525602832893 0.9438714419765777 ['ADAM9-RNF170|1|fusion', 'ADAM9-HTRA4|1|fusion', 'nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 483 4379 AAPAAAAAAA True PC9_epitope_Rep4 754.3973525949399 754.3962499358599 23.287 2 -0.2036868402230766 0.04839525602832893 0.9438714419765777 ['ENSG00000131668|ENST00000253968|BARX1', 'ENST00000525718.5_1_11:832961-833994:+|nuORF', 'ENST00000530155.5_1_11:832961-836303:+|nuORF', 'ENST00000280481.8_1_13:39261339-39261684:+|nuORF', 'nc|ENSG00000169181|Q6UXU4-3|GSG1L', 'ENSG00000169181|ENST00000447459|GSG1L'] 86619 16181 QRDSLLWKL True PC9_epitope_Rep4 1157.6556925359298 1157.65405490379 70.185 3 -0.2037111781630761 0.04839525602832893 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 77438 8678 NYNNQSSNF True PC9_epitope_Rep1 1086.4366512076201 1086.43607496793 38.219 1 -0.20380440658773785 0.04843182073668827 0.9438714419765777 ['ENSG00000135486|ENST00000340913|HNRNPA1', 'ENSG00000224578|ENST00000565308|HNRNPA1L3', 'nc|ENSG00000135486|P09651-2|HNRNPA1', 'chr12:54282662-54282800|502|546.71|0.0|25.7|+|ENST00000677249|HNRNPA1,HNRNPA1', 'nc|ENSG00000135486|P09651-3|HNRNPA1', 'ENSG00000139675|ENST00000357495|HNRNPA1L2', 'ENST00000432375.1_1_6:32293532-32293889:+|nuORF', 'ENST00000411857.2_1_1:179425361-179425934:-|nuORF', 'ENST00000444886.1_1_9:128358610-128358904:+|nuORF'] 76690 13698 NTLGVTVLS True PC9_epitope_Rep2 902.50729696674 902.50618993586 57.981 2 -0.20385110458102 0.048449648711943794 0.9438714419765777 ['ENSG00000100104|ENST00000215917|SRRD'] 77959 12343 PALALTAA True PC9_epitope_Rep1 726.42759009406 726.4270449679301 52.335 1 -0.20391011061976408 0.04846747601918465 0.9438714419765777 ['ENST00000375446.4_1_9:95883958-95884504:-|nuORF'] 3853 11153 AHALPTTL True PC9_epitope_Rep1 822.4599528515001 822.45884993586 47.783 2 -0.2039317858150949 0.048482577744473586 0.9438714419765777 ['ENSG00000130309|ENST00000252599|COLGALT1'] 127073 16195 VPYPPLLRA True PC9_epitope_Rep6 1024.6069514383598 1024.60584993586 74.648 2 -0.20398828186925408 0.048482577744473586 0.9438714419765777 ['ENST00000569585.1_1_16:1822224-1822659:-|nuORF', 'ENSG00000074071|ENST00000397375|MRPS34'] 61448 11841 LLEYCMVT True PC9_epitope_Rep1 970.4503763375799 970.44926993586 50.411 2 -0.2039916929235595 0.048482577744473586 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 69155 24706 LVLRRRKRRRI True H1975_Epitope_Rep2 1521.0327996836797 1521.0317099358601 101.59 2 -0.20399705725937484 0.048482577744473586 0.9438714419765777 ['ENST00000496567.5_1_9:97782205-97782394:+|nuORF'] 106888 7460 SYIGGHEGL True NCI_RA007_Epitope_Rep4 931.43994568291 931.43884993586 35.34 2 -0.20401560120651138 0.048500402765028754 0.9438714419765777 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 123165 8344 VHGPPTVSV True PC9_epitope_Rep4 891.48141657207 891.48030993586 39.553 2 -0.2040455767239682 0.04853514161546531 0.9438714419765777 ['ENSG00000142798|ENST00000374695|HSPG2'] 123378 14597 VICNNAVIE True PC9_epitope_Rep3 973.4902670036099 973.48916993586 61.275 2 -0.2040944279581344 0.04853514161546531 0.9438714419765777 ['ENSG00000070785|ENST00000360403|EIF2B3'] 70134 17063 LYKNLEIIDLY True H1975_Epitope_Rep1 1395.7649682013898 1395.7638699358602 71.058 2 -0.20411199469782232 0.04853514161546531 0.9438714419765777 ['ENST00000573577.5_1_17:5336118-5336172:+|nuORF'] 56594 11647 LDWREVRSQEL True H1975_Epitope_Rep3 1429.73137665733 1429.7302699358602 49.935 2 -0.20415873487989747 0.048552054845839736 0.9438714419765777 ['ENST00000540943.1_1_11:63357798-63375964:-|nuORF'] 57973 9523 LEQRRGFL True PC9_epitope_Rep2 1017.5719629119698 1017.57086993586 41.978 2 -0.20417046751633372 0.048552054845839736 0.9438714419765777 ['ENST00000579023.5_1_17:73127274-73127802:-|nuORF', 'nc|ENSG00000125458|Q8TCD5-2|NT5C', 'ENSG00000125458|ENST00000245552|NT5C', 'ENST00000583655.5_1_17:73127559-73127802:-|nuORF'] 117916 14930 VAQLKQLQAET True PC9_epitope_Rep3 1227.6823012065897 1227.6812099358601 62.563 2 -0.20439939168732343 0.04866262081366599 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 98618 12623 SINSHATEWSP True H1975_Epitope_Rep3 1227.55201531303 1227.55090993586 53.759 2 -0.20447806296315524 0.04866262081366599 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 139109 10069 YSPAQSQATIY True H1975_Epitope_Rep3 1227.57716743171 1227.57606993586 43.77 2 -0.2045605358591995 0.0486740579818713 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2'] 8848 9247 AVFPSIVGRPR True NCI_RA007_Epitope_Rep4 1197.69822605425 1197.6971299358602 42.421 2 -0.20456348881179778 0.0486740579818713 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 62531 19804 LLSWPELEP True PC9_epitope_Rep3 1082.5648118428599 1082.56370993586 81.408 2 -0.20456556260601672 0.0486740579818713 0.9438714419765777 ['ENST00000457542.6_2_15:42118039-42118483:+|nuORF'] 117193 13302 TYTDVTPRQF True PC9_epitope_Rep5 1226.59315184902 1226.59150490379 56.177 3 -0.20457202298922095 0.0486740579818713 0.9438714419765777 ['ENSG00000084090|ENST00000337288|STARD7', 'ENST00000462501.1_1_2:96858901-96861247:-|nuORF'] 63473 13749 LPHGFTNMA True PC9_epitope_Rep3 986.4643866089401 986.46328993586 57.968 2 -0.20461187333192807 0.0486740579818713 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 456 17855 [Acetylation]-AALTTLFK True H1975_Epitope_Rep1 905.52221907119 905.52167496793 74.352 1 -0.20466165698369707 0.0486740579818713 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2', 'CNDP2|p.W309Cfs*23|1|0.3|ENSG00000133313|chr18:74516250-74516250|G/-|frameshift_variant', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 23670 18532 EYGPVYSTW True PC9_epitope_Rep6 1100.48147614172 1100.48097496793 83.926 1 -0.2046715783889037 0.0486740579818713 0.9438714419765777 ['ENSG00000148158|ENST00000374232|SNX30'] 73448 6247 NETNVTENYE True NCI_RA007_Epitope_Rep5 1211.4942256533898 1211.49312993586 30.706 2 -0.20470171161448283 0.0486740579818713 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 69182 18775 LVLYRTKV True PC9_epitope_Rep4 990.6226015025 990.62150993586 80.301 2 -0.2047646661676127 0.0486900503754752 0.9438714419765777 ['ENSG00000112234|ENST00000369244|FBXL4'] 6046 23080 APLVTLEVL True PC9_epitope_Rep2 953.57973363101 953.57862993586 94.27 2 -0.20479990434537124 0.0486900503754752 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 81011 5223 PNSDULGMEEK True PC9_epitope_Rep5 1269.4450242871296 1269.44392993586 25.107 2 -0.20484079602795838 0.0486900503754752 0.9438714419765777 ['ENSG00000138018|ENST00000260585|SELENOI'] 29342 17054 FVDVLGLEEE True H1975_Epitope_Rep3 1148.5601203852398 1148.5595749679298 71.201 1 -0.2048753048902533 0.04870330493399495 0.9438714419765777 ['ENST00000512419.5_1_4:41258929-41270087:+|nuORF', 'ENSG00000154277|ENST00000284440|UCHL1'] 85197 11123 QKESDHIL True PC9_epitope_Rep6 968.4927095317598 968.49160993586 53.723 2 -0.2048766360356715 0.04870330493399495 0.9438714419765777 ['nc|ENSG00000180881|Q9BXY5|CAPS2', 'ENSG00000180881|ENST00000699294|CAPS2', 'nc|ENSG00000180881|Q9BXY5-5|CAPS2', 'nc|ENSG00000180881|Q9BXY5-3|CAPS2', 'ENST00000409004.5_1_12:75670025-75710066:-|nuORF', 'nc|ENSG00000180881|Q9BXY5-2|CAPS2', 'ENST00000336815.10_1_12:75687137-75710066:-|nuORF'] 140651 15504 YYPEYKLLF True NCI_RA007_Epitope_Rep4 1234.62741209942 1234.62630993586 67.334 2 -0.2049779813222639 0.04870330493399495 0.9438714419765777 ['ENSG00000159720|ENST00000290949|ATP6V0D1'] 66090 16129 LSNNKIQAL True PC9_epitope_Rep5 999.5712942056299 999.57018993586 67.03 2 -0.20498697551477296 0.04870330493399495 0.9438714419765777 ['ENSG00000164342|ENST00000296795|TLR3'] 35900 22305 GVAGTDIFLVV True PC9_epitope_Rep4 1089.60701100801 1089.60647496793 94.035 1 -0.20500719232757764 0.04870330493399495 0.9438714419765777 ['ENST00000481918.1_1_1:213186656-213188829:-|nuORF'] 101970 12712 SPMPGTLTA True PC9_epitope_Rep4 873.4266041178901 873.42550993586 56.751 2 -0.2050360299353903 0.04870330493399495 0.9438714419765777 ['ENSG00000113456|ENST00000382038|RAD1'] 119801 12808 VEVERTEVLR True PC9_epitope_Rep4 1228.67755017932 1228.67644993586 57.126 2 -0.2050891864079528 0.048721117477436994 0.9438714419765777 ['ENSG00000100884|ENST00000689861|CPNE6', 'nc|ENSG00000100884|O95741-2|CPNE6'] 36292 19502 GVGPVNISV True PC9_epitope_Rep3 840.4705175352 840.46942993586 80.247 2 -0.2052520834057112 0.048738016776512884 0.9438714419765777 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q922U2'] 67133 4544 LTDDLHKQY True H1975_Epitope_Rep3 1131.55603806431 1131.55438490379 22.598 3 -0.2053052616353974 0.048738016776512884 0.9438714419765777 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 20868 2632 EQRIKEAI True NCI_RA007_Epitope_Rep5 985.5556441414898 985.55454993586 14.812 2 -0.20542800643542497 0.04877181157792256 0.9438714419765777 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000132466|O75179-3|ANKRD17'] 28960 14349 FTETDDPEEYY True H1975_Epitope_Rep2 1407.53542175903 1407.5343299358601 60.342 2 -0.20544725145591808 0.04877181157792256 0.9438714419765777 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 16855 16049 EFSHKELFDFY True H1975_Epitope_Rep2 1460.6612314088397 1460.6601299358601 66.933 2 -0.20565922238696177 0.04877181157792256 0.9438714419765777 ['ENSG00000145781|ENST00000274458|COMMD10'] 86638 5750 QREMQRNWIK True PC9_epitope_Rep1 1387.7142871245499 1387.71265490379 26.935 3 -0.2057963903544696 0.04877181157792256 0.9438714419765777 ['ENST00000378123.4_1_5:140220788-140220842:+|nuORF'] 66086 10920 LSNNASIVL True NCI_RA007_Epitope_Rep3 929.51819600361 929.51708993586 50.033 2 -0.20582695887631583 0.04882615044744824 0.9438714419765777 ['ENST00000525268.2_1_11:77612536-77632479:-|nuORF'] 1536 5137 AEETEQMIEK True H1975_Epitope_Rep3 1206.5438186980998 1206.54272993586 24.863 2 -0.20584195012532114 0.04882615044744824 0.9438714419765777 ['ENSG00000171724|ENST00000302536|VAT1L'] 121282 13151 VGGYYPGIIL True NCI_RA007_Epitope_Rep3 1050.5749826037397 1050.57388993586 59.004 2 -0.20586368069460118 0.048840300267695015 0.9438714419765777 ['ENSG00000184497|ENST00000375353|TMEM255B'] 56691 8305 LEAEGGAKTLS True NCI_RA007_Epitope_Rep2 1074.5557037111398 1074.55460993586 36.944 2 -0.20586763306565897 0.048840300267695015 0.9438714419765777 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 61548 12055 LLGGIVAA True NCI_RA007_Epitope_Rep5 712.44832553864 712.4477749679301 53.028 1 -0.20587115694052865 0.048840300267695015 0.9438714419765777 ['ENSG00000119227|ENST00000412723|PIGZ', 'PIGZ|p.H312Lfs*39|1|0.11|ENSG00000119227|chr3:196947952-196947964|GAGCCGCGCGTGC/-|frameshift_variant'] 14568 8667 DVEVAAGA True PC9_epitope_Rep3 730.3497336961798 730.34918496793 38.287 1 -0.20591870991804836 0.048840300267695015 0.9438714419765777 ['ENST00000305901.6_1_15:53050010-53081074:-|nuORF'] 96904 15180 SETILTMVA True H1975_Epitope_Rep1 963.49468367771 963.4941349679301 63.652 1 -0.2059225125052551 0.048840300267695015 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 89129 7501 REFQQPLP True NCI_RA007_Epitope_Rep3 1013.5294293936497 1013.52832993586 36.627 2 -0.20601714113816993 0.0488946294528369 0.9438714419765777 ['ENST00000539416.5_1_9:127054798-127064323:+|nuORF', 'ENST00000546191.5_1_9:127054302-127064323:+|nuORF', 'ENST00000540326.5_1_9:127019887-127064323:+|nuORF', 'ENST00000447379.1_1_9:127062296-127064323:+|nuORF'] 69079 16240 LVIVHPEVT True PC9_epitope_Rep3 1005.58588164061 1005.58478993586 67.605 2 -0.20602531716844796 0.0488946294528369 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 6169 18390 APPLTSLQL True PC9_epitope_Rep6 938.54368247546 938.5431349679301 83.382 1 -0.20607877773066208 0.04891060197663971 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 98276 9942 SIFFTRRWELW True H1975_Epitope_Rep1 1539.7986683715098 1539.79702490379 43.178 3 -0.20612830941597554 0.04891060197663971 0.9438714419765777 ['ENST00000587971.5_1_18:31684099-31802142:-|nuORF'] 117442 13818 VADSSPFAL True NCI_RA007_Epitope_Rep4 905.44944773745 905.4488949679301 60.393 1 -0.20622260180283072 0.04891060197663971 0.9438714419765777 ['nc|ENSG00000042493|P40121-2|CAPG', 'ENSG00000042493|ENST00000263867|CAPG', 'ENST00000483659.5_1_2:85622736-85628768:-|nuORF'] 127450 7215 VQSLSLPR True NCI_RA007_Epitope_Rep5 898.5236157372199 898.52250993586 34.431 2 -0.20624312966393782 0.048928404305100606 0.9438714419765777 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT', 'nc|ENSG00000205221|Q6UXI7-3|VIT'] 127346 20978 VQPFLRVPL True PC9_epitope_Rep2 1067.64915060351 1067.6480499358602 86.143 2 -0.20633282060569633 0.04898364092389473 0.9438714419765777 ['ENSG00000023287|ENST00000025008|RB1CC1', 'nc|ENSG00000023287|Q8TDY2-2|RB1CC1'] 33234 8120 GLAEVAAAV True H1975_Epitope_Rep2 799.4439684341899 799.44286993586 36.183 2 -0.2063529349815435 0.049001441218859375 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 17605 20564 EHLTMLQVL True PC9_epitope_Rep5 1082.57941636118 1082.57830993586 84.144 2 -0.20640486625202703 0.0490192408474957 0.9438714419765777 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 135025 6133 YAHPSGTAL True PC9_epitope_Rep2 915.4450310633499 915.44392993586 28.985 2 -0.20649114433390184 0.04905392000898355 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF'] 88582 5391 RALCWSRREWR True NCI_RA007_Epitope_Rep2 1517.7786187166098 1517.77696490379 25.589 3 -0.2064966726205934 0.04905392000898355 0.9438714419765777 ['NUB1-ABCB8|1|fusion'] 128673 5922 VSLWLRRREHR True NCI_RA007_Epitope_Rep5 1506.8643969459 1506.8627549037901 29.466 3 -0.2065096823231266 0.04905392000898355 0.9438714419765777 ['ENSG00000178297|ENST00000696167|TMPRSS9', 'nc|ENSG00000178297|Q7Z410|TMPRSS9'] 90867 8508 RKYREWYEKYY True NCI_RA007_Epitope_Rep1 1682.8205260148995 1682.81887490379 37.094 3 -0.20654360919835452 0.0490680440152706 0.9438714419765777 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 14023 8172 DSADGFLK True NCI_RA007_Epitope_Rep2 851.40249754503 851.40140993586 36.424 2 -0.20655863261942922 0.0490680440152706 0.9438714419765777 ['CON__Q29443', 'CON__Q0IIK2'] 130927 17351 VVIGAVVAA True PC9_epitope_Rep5 797.50108938749 797.49998993586 71.739 2 -0.20656493192157055 0.0490680440152706 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.A319E|1|0.28|ENSG00000234745|chr6:31355163-31355163|G/T|missense_variant'] 62922 16646 LNADAIVV True PC9_epitope_Rep3 813.45961849833 813.4590749679301 69.165 1 -0.20656600623268515 0.0490680440152706 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 76689 13695 NTLGVTVLS True PC9_epitope_Rep2 902.50729696674 902.5067449679301 57.968 1 -0.20657909042672193 0.0490680440152706 0.9438714419765777 ['ENSG00000100104|ENST00000215917|SRRD'] 77039 10793 NVVNRLTSV True PC9_epitope_Rep6 1000.56654317836 1000.56544993586 52.354 2 -0.20664950164682946 0.04914106066843819 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 45751 11457 ISNEFKVEV True PC9_epitope_Rep5 1063.5549754351498 1063.5538699358601 49.068 2 -0.2066881437865182 0.04914106066843819 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 106572 7511 SVYDGHGGEEV True PC9_epitope_Rep2 1147.47818166643 1147.47708993586 34.259 2 -0.20679357808208598 0.049195359281437125 0.9438714419765777 ['ENSG00000115241|ENST00000344034|PPM1G'] 5660 7550 APAKSLVGQVA True PC9_epitope_Rep6 1039.6025943339098 1039.6014899358602 38.311 2 -0.2068028861197477 0.049195359281437125 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 75262 7266 NPNQYHYVA True PC9_epitope_Rep3 1104.49885754136 1104.49776993586 32.958 2 -0.20683443650651046 0.04921315095151663 0.9438714419765777 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A', 'ATP11A-CUL4A|1|fusion', 'ATP11A-CUL4A|2|fusion'] 119756 5390 VETPNSTPP True H1975_Epitope_Rep3 940.45017601344 940.44962496793 25.797 1 -0.2068560795085773 0.04922817850126298 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 125787 22160 VNLGAALLL True PC9_epitope_Rep2 882.5538532363399 882.5533049679301 90.726 1 -0.2068607926456026 0.04922817850126298 0.9438714419765777 ['ENSG00000149926|ENST00000380495|TLCD3B', 'ENST00000564806.1_1_16:30036506-30036905:-|nuORF', 'nc|ENSG00000149926|Q71RH2-2|TLCD3B'] 64425 16556 LQRRLKRLEPC True NCI_RA007_Epitope_Rep4 1410.8241719267 1410.82252490379 71.761 3 -0.20687563382355514 0.04922817850126298 0.9438714419765777 ['ENSG00000186710|ENST00000335621|CFAP73'] 109145 18083 TFLSSSPEFLW True PC9_epitope_Rep2 1312.63395403184 1312.6328499358601 74.858 2 -0.20688647776762326 0.04922817850126298 0.9438714419765777 ['ENST00000508622.1_1_4:130017347-130021853:+|nuORF'] 23924 10091 EYNNNFHVL True NCI_RA007_Epitope_Rep3 1148.5250722892001 1148.5239699358601 46.784 2 -0.2069180875417153 0.049243203801754946 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 3022 21841 AFSFIIAEI True NCI_RA007_Epitope_Rep5 1009.5484335027298 1009.54787496793 91.14 1 -0.20695460816589012 0.049243203801754946 0.9438714419765777 ['ENSG00000006116|ENST00000005284|CACNG3'] 83063 20727 PYLFPVAA True PC9_epitope_Rep4 876.4745402864799 876.47399496793 87.891 1 -0.20700118628524147 0.049243203801754946 0.9438714419765777 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4', 'ENST00000537634.1_1_12:6700611-6701611:-|nuORF', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENSG00000116254|ENST00000262450|CHD5'] 116297 6033 TVVTPDDVRYF True H1975_Epitope_Rep1 1310.65066672514 1310.6495699358602 28.277 2 -0.20701029573657184 0.049243203801754946 0.9438714419765777 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1'] 72282 13598 MSDTTFKAL True PC9_epitope_Rep5 1012.48993265044 1012.4888299358599 57.329 2 -0.2070676068864464 0.0492573053466532 0.9438714419765777 ['ENSG00000198898|ENST00000361183|CAPZA2', 'ENST00000426421.5_1_7:116544367-116557918:+|nuORF', 'ENSG00000116489|ENST00000263168|CAPZA1', 'ENST00000466066.1_1_1:113202257-113212751:+|nuORF', 'ENST00000565906.2_1_15:89532752-89533049:-|nuORF', 'CTTNBP2NL-CAPZA1|1|fusion'] 63502 18484 LPISVAASI True PC9_epitope_Rep4 869.52221875489 869.52167496793 79.17 1 -0.20707806593966788 0.0492573053466532 0.9438714419765777 ['ENSG00000178401|ENST00000549441|DNAJC22'] 107154 11080 SYNEHWNYL True NCI_RA007_Epitope_Rep3 1224.5199869087598 1224.5188899358602 50.683 2 -0.20709290874008604 0.0492573053466532 0.9438714419765777 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR', 'ENST00000535739.5_1_12:6493425-6494510:+|nuORF'] 47541 21257 IYLPYLQNW True PC9_epitope_Rep6 1208.6229954253201 1208.62188993586 94.618 2 -0.2070967863469157 0.0492573053466532 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-5|UEVLD', 'ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 46164 11627 ITDDLHFY True H1975_Epitope_Rep1 1022.47091145802 1022.4698099358601 49.713 2 -0.20711050136741066 0.0492573053466532 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 16899 21307 EGALSLLCFL True PC9_epitope_Rep1 1064.55761828744 1064.55707496793 86.786 1 -0.2071167090738408 0.04927416941035618 0.9438714419765777 ['ENST00000593631.1_1_19:49901215-49902480:+|nuORF'] 36293 18566 GVGPVNISV True PC9_epitope_Rep4 840.4705175352 840.46942993586 79.491 2 -0.20714428000818136 0.04927416941035618 0.9438714419765777 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q922U2'] 87532 18474 QTIALITYL True H1975_Epitope_Rep1 1034.60119735158 1034.60067496793 77.016 1 -0.2071895427862697 0.04928550052371689 0.9438714419765777 ['nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'SMARCA2|p.M767I|2|0.59|ENSG00000080503|chr9:2081948-2081948|G/A|missense_variant', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant'] 32351 17327 GGDDSFNTF True PC9_epitope_Rep3 958.3668403123 958.36574993586 71.822 2 -0.20721540635020222 0.04928550052371689 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 13696 8009 DQGCPRCKTTK True NCI_RA007_Epitope_Rep2 1235.57507634007 1235.57396993586 35.783 2 -0.20731440097151507 0.04928550052371689 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'nc|ENSG00000020426|P51948-2|MNAT1', 'ENSG00000020426|ENST00000261245|MNAT1', 'ENST00000555545.1_1_14:61201484-61220316:+|nuORF', 'ENST00000553354.5_1_14:61201502-61275133:+|nuORF', 'ENST00000556764.5_1_14:61201502-61275155:+|nuORF'] 106651 19333 SYADQMFLL True NCI_RA007_Epitope_Rep2 1086.50558271458 1086.5044899358602 80.103 2 -0.20733929731961828 0.04928550052371689 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 32509 11387 GGPGGVGGL True PC9_epitope_Rep3 669.34458874609 669.34404496793 48.802 1 -0.20741064785092225 0.04928550052371689 0.9438714419765777 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 81748 13672 PSCSAAVAM True PC9_epitope_Rep5 835.35681030591 835.3562649679301 57.614 1 -0.20745915908496 0.04928550052371689 0.9438714419765777 ['ENST00000427525.2_1_15:85175210-85177593:+|nuORF'] 11094 4560 DEDKEKTFEEK True H1975_Epitope_Rep3 1396.6358045066397 1396.6347099358602 22.66 2 -0.2074613648841844 0.04928550052371689 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 132829 11126 VYTHVLSAF True NCI_RA007_Epitope_Rep3 1035.53893144819 1035.5378299358601 50.868 2 -0.2074779964864578 0.04928550052371689 0.9438714419765777 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF', 'ENST00000590387.1_1_18:21107838-21109292:+|nuORF'] 52396 9804 KPGKPRKRKKR True NCI_RA007_Epitope_Rep5 1377.9157042427698 1377.91405490379 44.358 3 -0.20758265638245088 0.049338844520919446 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 75231 5001 NPKDNNQFASA True PC9_epitope_Rep5 1204.54726428576 1204.54616993586 24.269 2 -0.2075921531250271 0.049338844520919446 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 125840 19373 VNPIYRQVPR True PC9_epitope_Rep3 1240.70403971068 1240.70294993586 79.743 2 -0.20762175188731807 0.049338844520919446 0.9438714419765777 ['ARHGAP6|p.L403V|1|0.18|ENSG00000047648|chrX:11186302-11186302|G/C|missense_variant'] 24046 13824 EYQEAILAY True H1975_Epitope_Rep2 1098.5233409536997 1098.5222499358601 58.322 2 -0.20764912151576465 0.04935477838040023 0.9438714419765777 ['JAM2|p.C50Y|1|0.11|ENSG00000154721|chr21:25689881-25689881|G/A|missense_variant'] 73383 4944 NEQYQKLT True H1975_Epitope_Rep1 1022.5032742154599 1022.50216993586 24.093 2 -0.20765452638207568 0.04935477838040023 0.9438714419765777 ['nc|ENSG00000118965|Q9P2L0|WDR35', 'ENSG00000118965|ENST00000281405|WDR35'] 129582 14804 VTGLQYSV True PC9_epitope_Rep6 865.45453311789 865.45342993586 68.913 2 -0.20768450881695918 0.04935477838040023 0.9438714419765777 ['nc|ENSG00000134313|Q9ULH0-3|KIDINS220'] 128822 10106 VSRVVCAMI True PC9_epitope_Rep1 976.5197933100799 976.51868993586 43.745 2 -0.20771903009550732 0.04937255708701913 0.9438714419765777 ['UBR1-TGM5|2|fusion', 'UBR1-TGM5|3|fusion', 'nc|ENSG00000104055|O43548-2|TGM5', 'ENSG00000104055|ENST00000220420|TGM5'] 111646 16156 TLNTTYSFLT True PC9_epitope_Rep2 1159.57610480255 1159.5750099358602 67.398 2 -0.2078794422525562 0.04940626460963067 0.9438714419765777 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000504459.5_1_5:74009375-74016573:+|nuORF'] 67641 9682 LTFCWESSP True H1975_Epitope_Rep3 1068.45863252216 1068.45752993586 42.261 2 -0.20794928745466962 0.04940626460963067 0.9438714419765777 ['nc|ENSG00000185436|Q8IU57-2|IFNLR1', 'ENSG00000185436|ENST00000327535|IFNLR1'] 56083 5921 LDLGSGVK True NCI_RA007_Epitope_Rep5 787.44396843419 787.44286993586 29.462 2 -0.20795411434390584 0.04940626460963067 0.9438714419765777 ['ENST00000494039.1_X:52241120-52243863:+|nuORF', 'ENSG00000204382|ENST00000375616|XAGE1B', 'ENSG00000204379|ENST00000375602|XAGE1A', 'chrX:52515573-52520709|116|11.71|0.09|6.96|-|ENST00000518075|XAGE1B,XAGE1B'] 88346 19071 QYLTAAALHNL True PC9_epitope_Rep5 1213.6455217750497 1213.6444299358602 78.387 2 -0.20795794539445098 0.04940626460963067 0.9438714419765777 ['ENSG00000115008|ENST00000263339|IL1A'] 9298 8439 AVSALQDVNT True H1975_Epitope_Rep2 1016.5138388991601 1016.51274993586 37.411 2 -0.20798298196579235 0.049442740668711196 0.9438714419765777 ['ENSG00000183111|ENST00000333677|ARHGEF37'] 212 7816 AAFNNRSVL True PC9_epitope_Rep5 990.5246783663799 990.52358993586 35.009 2 -0.208035921838676 0.049479215363614264 0.9438714419765777 ['ENST00000305641.6_1_15:43621161-43621251:-|nuORF'] 88329 11749 QYLPHVARL True PC9_epitope_Rep2 1095.61891310439 1095.6178099358601 50.526 2 -0.20816058527168754 0.049514762804091325 0.9438714419765777 ['ENSG00000148248|ENST00000371989|SURF4', 'ENST00000467910.5_1_9:136231851-136242840:-|nuORF', 'nc|ENSG00000148248|O15260-3|SURF4', 'nc|ENSG00000148248|O15260-2|SURF4'] 79714 4224 PHPPPPPPP True NCI_RA007_Epitope_Rep5 931.49158733295 931.49048993586 22.785 2 -0.20818196368803987 0.049514762804091325 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8'] 81220 18748 PPLPPLPPP True PC9_epitope_Rep5 923.54803957991 923.54694993586 77.126 2 -0.20828407654602168 0.04955030758587162 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF'] 20041 12496 ENALVGDVI True PC9_epitope_Rep4 928.48656152216 928.48546993586 55.876 2 -0.20830174229871698 0.04955030758587162 0.9438714419765777 ['ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.T3539Sfs*28|1|0.35|ENSG00000086570|chr5:151521979-151521980|-/ATGAA|frameshift_variant'] 95269 12011 SADRGLVL True PC9_epitope_Rep1 829.46576650793 829.46466993586 51.061 2 -0.2083934724717395 0.04960547473916458 0.9438714419765777 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-7|FCAR'] 8756 20699 AVEAQQFAL True PC9_epitope_Rep5 975.5025459394699 975.50144993586 84.676 2 -0.20853415336046296 0.049623244769365964 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11'] 69313 13677 LVPPDQPEV True PC9_epitope_Rep4 992.51786165044 992.51676993586 60.499 2 -0.2086053476531037 0.04964008600542208 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 27749 17872 FQDSIHVGF True PC9_epitope_Rep3 1048.4977949121999 1048.49668993586 73.942 2 -0.2086331594980047 0.04964008600542208 0.9438714419765777 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'ENST00000479356.1_1_17:71354047-71433905:-|nuORF'] 45844 12163 ISQEQVTV True PC9_epitope_Rep6 902.4709114580199 902.46980993586 58.142 2 -0.2087134070425195 0.0496746933891714 0.9438714419765777 ['ENST00000558287.1_1_15:63632408-63634218:-|nuORF'] 119940 9756 VEYEVPEA True NCI_RA007_Epitope_Rep4 934.4283779396998 934.4278249679301 44.375 1 -0.20877654822465586 0.0496746933891714 0.9438714419765777 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'nc|ENSG00000179950|Q9UHX1-4|PUF60', 'nc|ENSG00000179950|Q9UHX1-6|PUF60', 'nc|ENSG00000179950|Q9UHX1-3|PUF60', 'nc|ENSG00000179950|Q9UHX1-5|PUF60'] 33034 5623 GKAAIVEKL True NCI_RA007_Epitope_Rep4 927.57531695691 927.57420993586 28.229 2 -0.20879279881604795 0.0496746933891714 0.9438714419765777 ['ENST00000568233.5_1_16:67899033-67902523:+|nuORF', 'ENST00000551207.2_1_14:36289043-36289391:+|nuORF', 'ENSG00000102898|ENST00000219169|NUTF2'] 115171 17057 TVAILPLFL True PC9_epitope_Rep6 985.62120452017 985.62010993586 78.174 2 -0.20887557790203973 0.04971115556469555 0.9438714419765777 ['ENSG00000091262|ENST00000205557|ABCC6', 'ENST00000456970.6_1_16:16251574-16267200:-|nuORF'] 41217 8861 IADPNIAKL True NCI_RA007_Epitope_Rep3 953.55458151233 953.55348993586 41.947 2 -0.20911089781122544 0.0498373649381239 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 99853 11494 SLHDPVSI True PC9_epitope_Rep2 866.44978209062 866.44868993586 49.535 2 -0.20918114756057005 0.0498373649381239 0.9438714419765777 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 27688 19045 FQDGDTIVNV True PC9_epitope_Rep1 1106.52440358286 1106.52387496793 78.048 1 -0.20918187201646044 0.0498373649381239 0.9438714419765777 ['ENSG00000002834|ENST00000318008|LASP1', 'nc|ENSG00000002834|Q14847-3|LASP1'] 119753 5458 VETPNSTPP True H1975_Epitope_Rep2 940.45017601344 940.44962496793 26.021 1 -0.20919986911076893 0.0498373649381239 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 55532 6462 LAWPHGGRSRS True NCI_RA007_Epitope_Rep5 1222.63193739958 1222.6308499358602 31.52 2 -0.20925550909484614 0.0498373649381239 0.9438714419765777 ['ENST00000403325.5_1_22:19841974-19842145:-|nuORF'] 33235 8307 GLAEVAAAV True H1975_Epitope_Rep2 799.4439684341899 799.44286993586 36.904 2 -0.20933764734089685 0.049852330928259 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 92386 3490 RQRDNMMSMMK True NCI_RA007_Epitope_Rep2 1426.63016577138 1426.6285049037901 18.228 3 -0.20947152004133657 0.049852330928259 0.9438714419765777 ['ENST00000519528.1_1_8:103299768-103305927:-|nuORF'] 116736 20357 TYLDNGVVF True PC9_epitope_Rep4 1026.5022115862998 1026.50110993586 86.445 2 -0.2095093663638271 0.049852330928259 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 73886 5253 NHHLQETSF True PC9_epitope_Rep2 1111.50467119779 1111.50356993586 25.592 2 -0.20951147923743088 0.049852330928259 0.9438714419765777 ['nc|ENSG00000133112|P13693-2|TPT1', 'ENSG00000133112|ENST00000530705|TPT1', 'ENST00000533567.5_1_13:45912892-45914385:-|nuORF'] 84817 13744 QHLLDTNQL True PC9_epitope_Rep1 1080.5563724174801 1080.55526993586 57.711 2 -0.20960422059897305 0.04988691800153268 0.9438714419765777 ['nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF', 'EHF|p.D69V|2|0.38|ENSG00000135373|chr11:34646547-34646547|A/T|missense_variant'] 78845 6113 PERLAVTTA True H1975_Epitope_Rep2 956.52909504048 956.52798993586 28.492 2 -0.2096724323352455 0.04988691800153268 0.9438714419765777 ['ENSG00000085465|ENST00000369732|OVGP1'] 102711 15998 SQDSFYRVL True PC9_epitope_Rep4 1113.54547338061 1113.54436993586 69.469 2 -0.2096755250405567 0.04988691800153268 0.9438714419765777 ['ENSG00000143179|ENST00000367879|UCK2'] 99283 12096 SLDFFHSDRK True H1975_Epitope_Rep3 1250.60438523906 1250.6032899358602 51.692 2 -0.20970476664578142 0.04989721547374323 0.9438714419765777 ['ENST00000590311.5_1_17:67108322-67108499:-|nuORF'] 70462 10255 LYSERTIL True PC9_epitope_Rep1 993.5494961318899 993.54838993586 44.329 2 -0.20971840280380355 0.04989721547374323 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1'] 25400 16285 FEIRDLLPA True H1975_Epitope_Rep2 1072.59169529704 1072.5905899358602 67.855 2 -0.2097491956182757 0.04989721547374323 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 26658 14313 FLAQPVTL True H1975_Epitope_Rep2 887.5116540711899 887.51054993586 60.204 2 -0.20978213966020517 0.04989721547374323 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'nc|ENSG00000070814|Q13428-5|TCOF1'] 67039 16824 LTAPELIL True H1975_Epitope_Rep2 868.52696978216 868.5264249679301 69.96 1 -0.20979234563068286 0.04989721547374323 0.9438714419765777 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 45501 12825 ISERQAEVL True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 54.352 2 -0.20984422961662488 0.04989721547374323 0.9438714419765777 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 88067 17609 QVVGGIYGV True PC9_epitope_Rep4 890.4861675993399 890.48506993586 75.749 2 -0.20984844521968665 0.04989721547374323 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 55102 15542 LALPRALQ True PC9_epitope_Rep2 880.5494365622399 880.54832993586 65.054 2 -0.20989575727855372 0.04989721547374323 0.9438714419765777 ['ENST00000597244.1_1_19:16688850-16689066:-|nuORF'] 105639 9580 SVFHHWHSYME True H1975_Epitope_Rep2 1458.6139043769401 1458.61225490379 41.825 3 -0.2099000828117862 0.04989721547374323 0.9438714419765777 ['ENSG00000161040|ENST00000440067|FBXL13', 'nc|ENSG00000161040|Q8NEE6-3|FBXL13', 'nc|ENSG00000161040|Q8NEE6-2|FBXL13', 'nc|ENSG00000161040|Q8NEE6|FBXL13', 'nc|ENSG00000161040|Q8NEE6-4|FBXL13'] 26295 11216 FIDKVRFL True H1975_Epitope_Rep2 1036.6069514383598 1036.60584993586 48.183 2 -0.20996950556895394 0.04991497075367681 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000170423|ENST00000304620|KRT78', 'CON__Q8N1N4-2', 'CON__Q7RTT2', 'KRT76|p.A195S|1|0.29|ENSG00000185069|chr12:52776709-52776709|C/A|missense_variant', 'nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000550170.5_1_12:53294858-53298765:-|nuORF', 'ENST00000562022.1_1_15:43093683-43094592:-|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'CON__Q6IFZ6', 'ENSG00000189182|ENST00000341809|KRT77', 'CON__Q7Z794', 'CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264', 'ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'CON__P50446', 'ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908', 'CON__Q01546', 'CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'CON__Q6IME9', 'nc|ENSG00000186049|Q86Y46-2|KRT73', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'ENSG00000186049|ENST00000305748|KRT73', 'CON__Q32MB2', 'CON__Q3TTY5', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'CON__Q922U2', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7', 'CON__Q9R0H5', 'ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386', 'CON__Q61726', 'ENSG00000170442|ENST00000423955|KRT86', 'CON__O43790', 'ENSG00000170523|ENST00000293670|KRT83', 'CON__Q6NT21', 'CON__P78385', 'ENSG00000205426|ENST00000327741|KRT81', 'CON__Q14533'] 130802 10227 VVESTGVF True NCI_RA007_Epitope_Rep4 836.4279840168799 836.42743496793 46.193 1 -0.21015144504675481 0.04995047932278138 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6645960-6646242:+|nuORF', 'ENST00000425487.2_1_X:46299833-46299950:-|nuORF'] 5845 7576 APGIPRKD True PC9_epitope_Rep3 852.4817509252399 852.48064993586 34.141 2 -0.21021389623213146 0.04995047932278138 0.9438714419765777 ['ENST00000567570.5_3_15:75182414-75182582:+|nuORF'] 82101 10343 PTAEGLAAAA True PC9_epitope_Rep2 870.4446967101799 870.44358993586 45.11 2 -0.21026746146687422 0.04998411719640488 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 125659 18118 VMPEAVPEV True PC9_epitope_Rep5 969.4841189940098 969.48302993586 74.701 2 -0.21028680600372793 0.04998411719640488 0.9438714419765777 ['ENSG00000101191|ENST00000395343|DIDO1', 'DIDO1|p.D900N|1|0.12|ENSG00000101191|chr20:62894069-62894069|C/T|missense_variant', 'nc|ENSG00000101191|Q9BTC0-1|DIDO1'] 124198 14366 VLAGTMATVV True PC9_epitope_Rep3 960.5314035396 960.53030993586 60.351 2 -0.2102878196932102 0.04998411719640488 0.9438714419765777 ['ENSG00000148600|ENST00000623527|CDHR1', 'ENST00000459673.1_1_10:85972822-85974374:+|nuORF'] 42429 6734 IEQELTSKQG True H1975_Epitope_Rep1 1131.57716743171 1131.57606993586 30.943 2 -0.21030175327696227 0.04998411719640488 0.9438714419765777 ['nc|ENSG00000141376|Q9H6U6-6|BCAS3', 'ENSG00000141376|ENST00000407086|BCAS3', 'nc|ENSG00000141376|Q9H6U6|BCAS3', 'nc|ENSG00000141376|Q9H6U6-7|BCAS3', 'nc|ENSG00000141376|Q9H6U6-3|BCAS3', 'nc|ENSG00000141376|Q9H6U6-8|BCAS3'] 62206 21576 LLPQGLPGL True PC9_epitope_Rep3 906.5538532363399 906.55274993586 88.286 2 -0.2103322368813982 0.05002055383235547 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 136559 12426 YHSEVPVSL True PC9_epitope_Rep6 1029.51311062317 1029.51200993586 59.225 2 -0.21046505573639496 0.050092487061153566 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'FOXN2-SPTBN1|1|fusion'] 2560 11776 AERLWRLP True H1975_Epitope_Rep1 1039.5926983565498 1039.59160993586 50.288 2 -0.21051941365365845 0.050092487061153566 0.9438714419765777 ['ENST00000419769.6_1_10:127408273-127409798:+|nuORF'] 55537 11127 LAYAENIAL True PC9_epitope_Rep3 976.52294703088 976.52184993586 47.798 2 -0.21053071143195995 0.050092487061153566 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 111737 11287 TLQEESPIV True H1975_Epitope_Rep2 1014.5233409536999 1014.52224993586 48.463 2 -0.21067289567625697 0.050202716589129906 0.9438714419765777 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 25576 12864 FESPNISVP True H1975_Epitope_Rep3 988.48656152216 988.48546993586 54.704 2 -0.21072323849790192 0.050202716589129906 0.9438714419765777 ['nc|ENSG00000196821|Q9H6K1-2|ILRUN', 'ENSG00000196821|ENST00000374023|ILRUN'] 32543 6607 GGTEPVVE True NCI_RA007_Epitope_Rep3 786.37594844402 786.3753949679301 33.048 1 -0.21072891653498704 0.050216709012105815 0.9438714419765777 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 114257 17399 TSAESFVNV True PC9_epitope_Rep1 952.45017601344 952.44906993586 71.726 2 -0.21079802440575532 0.050216709012105815 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 29338 18432 FVDSVRRQFEF True PC9_epitope_Rep2 1428.7149983171996 1428.71335490379 76.23 3 -0.21081109045751126 0.050216709012105815 0.9438714419765777 ['ENSG00000158246|ENST00000289166|TENT5B'] 100748 15751 SLRLQNLV True PC9_epitope_Rep5 941.56581490237 941.56470993586 65.585 2 -0.21083501790776438 0.050216709012105815 0.9438714419765777 ['ENST00000398956.2_1_21:38862623-38862677:+|nuORF'] 116735 21055 TYLDNGVVF True PC9_epitope_Rep2 1026.5022115862998 1026.5016749679298 86.442 1 -0.21090654907623407 0.050216709012105815 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 99574 18305 SLFGKDIK True PC9_epitope_Rep2 906.5174677276199 906.51636993586 75.738 2 -0.21093916190475492 0.050234452352930184 0.9438714419765777 ['ENSG00000175318|ENST00000309731|GRAMD2A'] 37774 5914 HAYDGKDYI True NCI_RA007_Epitope_Rep4 1080.48762415132 1080.48652993586 29.37 2 -0.21101200074186058 0.050269937045823915 0.9438714419765777 ['ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F', 'nc|ENSG00000206341|P01893|HLA-H'] 27059 21549 FLPAGIVAV True PC9_epitope_Rep3 885.53238951577 885.53128993586 88.183 2 -0.21105132761502451 0.050269937045823915 0.9438714419765777 ['nc|ENSG00000122882|O95905-2|ECD', 'ENSG00000122882|ENST00000372979|ECD', 'nc|ENSG00000122882|O95905-3|ECD'] 69415 14706 LVQYRWPR True PC9_epitope_Rep1 1116.6192474575598 1116.6181499358602 61.386 2 -0.21113931495626076 0.05032503922887245 0.9438714419765777 ['ENSG00000102595|ENST00000376747|UGGT2'] 104836 12787 STEGPSATEVP True PC9_epitope_Rep2 1073.48768372097 1073.4865899358601 54.488 2 -0.2111695773993992 0.05034089847763146 0.9438714419765777 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN'] 84486 21671 QGPLLLPGL True PC9_epitope_Rep1 906.5538532363399 906.55274993586 88.187 2 -0.2112150385238672 0.05034089847763146 0.9438714419765777 ['nc|ENSG00000131355|Q9BY15-2|ADGRE3', 'ADGRE3|p.Q577Rfs*41|1|0.24|ENSG00000131355|chr19:14630122-14630122|G/-|frameshift_variant', 'ENSG00000131355|ENST00000253673|ADGRE3', 'nc|ENSG00000131355|Q9BY15-3|ADGRE3'] 15575 10420 EATEWIQDP True H1975_Epitope_Rep2 1087.48220441771 1087.48110993586 45.093 2 -0.21122423005549368 0.05034089847763146 0.9438714419765777 ['ENSG00000134256|ENST00000682167|CD101'] 136000 8686 YFHRKHWVRIR True NCI_RA007_Epitope_Rep3 1596.89021777092 1596.8885849037902 41.247 3 -0.21126967823393794 0.05041090773253642 0.9438714419765777 ['nc|ENSG00000290746|Q8WTZ4|CA5BP1', 'ENST00000380334.6_1_X:15706900-15721312:+|nuORF'] 80811 13959 PLTGRRWKI True PC9_epitope_Rep3 1125.67709668685 1125.67546490379 58.769 3 -0.21128845939169327 0.05041090773253642 0.9438714419765777 ['ENSG00000171495|ENST00000399564|MROH2B', 'nc|ENSG00000171495|Q7Z745-2|MROH2B', 'MROH2B|p.N1445Tfs*12|1|0.3|ENSG00000171495|chr5:41000696-41000696|G/-|frameshift_variant'] 112235 20310 TLWVWALAP True PC9_epitope_Rep4 1055.5804023373498 1055.57930993586 86.265 2 -0.21131187461427514 0.05041090773253642 0.9438714419765777 ['nc|ENSG00000284730|P0DPE3|TMDD1'] 81222 22706 PPLQLQELF True H1975_Epitope_Rep3 1083.59644632431 1083.5953499358602 94.878 2 -0.21132650824165883 0.05041090773253642 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000486282.6_1_1:110163774-110168851:+|nuORF'] 106163 7892 SVPEEFHTT True PC9_epitope_Rep4 1045.47163973401 1045.4705499358602 37.786 2 -0.21135498543589495 0.05041090773253642 0.9438714419765777 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1'] 4785 9023 ALEKEQRERIP True H1975_Epitope_Rep3 1367.75211210191 1367.75100993586 39.701 2 -0.21137533815273096 0.05044732074484974 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 79784 8037 PHYPTPPAP True PC9_epitope_Rep1 975.4814165720699 975.48030993586 35.736 2 -0.21149357758830512 0.05053693155289943 0.9438714419765777 ['ENSG00000271503|ENST00000651122|CCL5'] 90009 12838 RGDLPFVVPR True PC9_epitope_Rep6 1154.6560268890998 1154.65492993586 60.892 2 -0.21156847393195524 0.05053693155289943 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 75226 4839 NPKDNNQFASA True PC9_epitope_Rep1 1204.54726428576 1204.54616993586 23.483 2 -0.2115743901382108 0.05053693155289943 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 56360 16047 LDRNRLGGF True PC9_epitope_Rep6 1046.5621265042598 1046.56102993586 74.049 2 -0.21157921058904522 0.05053693155289943 0.9438714419765777 ['ENSG00000204950|ENST00000378075|LRRC10B'] 102329 6497 SPVFTSRSA True PC9_epitope_Rep3 950.48214484806 950.48159496793 30.016 1 -0.2116489305814783 0.050553719162604815 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 115974 11407 TVQELIPLAKE True H1975_Epitope_Rep1 1239.7074533252696 1239.70634993586 48.856 2 -0.21165893432233787 0.050553719162604815 0.9438714419765777 ['ENSG00000123689|ENST00000367029|G0S2'] 135514 13811 YEDSGIPLP True H1975_Epitope_Rep3 989.4705771048499 989.46948993586 58.429 2 -0.21169421045683912 0.05057144991409576 0.9438714419765777 ['ENST00000547709.1_1_17:6919595-6920637:+|nuORF', 'ENST00000549857.1_1_17:6919676-6920027:+|nuORF', 'nc|ENSG00000258315|Q8IXM2-2|BAP18', 'ENSG00000258315|ENST00000439424|C17orf49', 'nc|ENSG00000258315|Q8IXM2-3|BAP18'] 20165 7602 ENPNSLAIY True H1975_Epitope_Rep2 1019.49237517859 1019.49126993586 34.194 2 -0.21173177708756022 0.05058540137807406 0.9438714419765777 ['DCAF12L1|p.W220Cfs*93|1|0.44|ENSG00000198889|chrX:126551949-126551949|C/-|frameshift_variant', 'ENSG00000198889|ENST00000371126|DCAF12L1', 'ENSG00000198354|ENST00000360028|DCAF12L2'] 74736 19094 NLLILYDAI True PC9_epitope_Rep3 1046.6011973515801 1046.60010993586 78.668 2 -0.2117547979426243 0.05058540137807406 0.9438714419765777 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 140118 20134 YVPPELITL True PC9_epitope_Rep6 1043.59029831471 1043.58977496793 90.117 1 -0.21176086527566867 0.05058540137807406 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 33318 14020 GLDLQACIDL True H1975_Epitope_Rep1 1059.52704643515 1059.5259499358601 59.089 2 -0.21176324882241146 0.05058540137807406 0.9438714419765777 ['MYH15|p.H1065Pfs*7|1|0.16|ENSG00000144821|chr3:108437641-108437641|T/-|frameshift_variant', 'ENSG00000144821|ENST00000693548|MYH15', 'MYH15|p.K849Sfs*9|1|0.15|ENSG00000144821|chr3:108444809-108444809|T/-|frameshift_variant'] 45905 5266 ISRHTFRGLK True NCI_RA007_Epitope_Rep4 1213.7043740638499 1213.70272490379 26.803 3 -0.21176420605325838 0.05058540137807406 0.9438714419765777 ['nc|ENSG00000108231|O95970-2|LGI1', 'ENSG00000108231|ENST00000371418|LGI1'] 77880 13750 PAGSFLLT True NCI_RA007_Epitope_Rep3 804.43815477776 804.43760496793 61.409 1 -0.2119361842566143 0.05064047503454457 0.9438714419765777 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 76196 7601 NRVEVGKDQEF True PC9_epitope_Rep5 1319.6469783270297 1319.64532490379 34.186 3 -0.21194652918398071 0.050655364277979016 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 77006 15593 NVTEYVVRV True PC9_epitope_Rep5 1077.5818588893299 1077.5807699358602 64.987 2 -0.21195679969078962 0.050655364277979016 0.9438714419765777 ['ENSG00000125651|ENST00000394456|GTF2F1', 'ENST00000595047.5_1_19:6392384-6393012:-|nuORF'] 65646 11148 LSGRVTLLLN True NCI_RA007_Epitope_Rep4 1084.6604435631998 1084.65934993586 49.755 2 -0.21196259664488853 0.050655364277979016 0.9438714419765777 ['ENST00000361127.5_1_1:113666969-113667131:+|nuORF'] 119757 5501 VETPNSTPP True H1975_Epitope_Rep3 940.45017601344 940.44962496793 26.211 1 -0.21196901446173086 0.050655364277979016 0.9438714419765777 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 24601 5442 FANGRSTGL True PC9_epitope_Rep4 921.46682913709 921.4657299358599 27.669 2 -0.21204147009201119 0.05067119732641288 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 39763 7338 HPYPPGPGV True PC9_epitope_Rep4 919.4552018242299 919.45410993586 35.554 2 -0.21206780332065872 0.05067119732641288 0.9438714419765777 ['ENSG00000171566|ENST00000499023|PLRG1', 'ENST00000512719.5_1_4:155467261-155471460:-|nuORF'] 105980 11166 SVLIREEL True PC9_epitope_Rep6 957.54949613189 957.54838993586 53.902 2 -0.2120957967441104 0.05067119732641288 0.9438714419765777 ['TRIM32|p.G615E|1|0.63|ENSG00000119401|chr9:116699586-116699586|G/A|missense_variant'] 112254 19596 TLYMYNTV True PC9_epitope_Rep1 1003.46846892987 1003.46736993586 80.203 2 -0.21225775213417422 0.050707591202718345 0.9438714419765777 ['DNAH2|p.D2594Y|1|0.42|ENSG00000183914|chr17:7796569-7796569|G/T|missense_variant'] 44545 13261 IPATPGIGA True PC9_epitope_Rep2 795.4490538146299 795.44794993586 56.282 2 -0.2123302790111476 0.050723420143750586 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 135366 9904 YDGHLPIEIK True NCI_RA007_Epitope_Rep2 1183.62372370131 1183.62208490379 43.152 3 -0.21243675039039067 0.050723420143750586 0.9438714419765777 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF', 'ENST00000393618.5_1_7:105910735-105925330:-|nuORF', 'ENST00000489358.5_1_7:105912543-105925330:-|nuORF', 'ENST00000486949.5_1_7:105912936-105925330:-|nuORF'] 110832 6022 TKSKTVYSILR True PC9_epitope_Rep5 1294.76088588046 1294.7592449037902 28.157 3 -0.21244791203679653 0.050723420143750586 0.9438714419765777 ['ENSG00000134001|ENST00000256383|EIF2S1'] 40667 8935 HTLFGDELC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep1 1218.5703085088896 1218.56866490379 38.756 3 -0.21252696317803813 0.050740194522747216 0.9438714419765777 ['CON__P02769'] 67046 20823 LTARMLIAL True PC9_epitope_Rep1 1000.6103225666399 1000.60922993586 84.925 2 -0.21255130152521945 0.050740194522747216 0.9438714419765777 ['ENSG00000001631|ENST00000394505|KRIT1', 'nc|ENSG00000001631|O00522-3|KRIT1', 'ENST00000486261.5_1_7:91865725-91870409:-|nuORF'] 64099 14270 LQEDPPVGV True PC9_epitope_Rep1 952.4865615221598 952.48601496793 59.713 1 -0.21261398172546359 0.05075507270724833 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 130634 16577 VVAGVANALA True PC9_epitope_Rep3 883.5127167003499 883.51160993586 68.902 2 -0.21261743173692732 0.05075507270724833 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENSG00000223609|ENST00000650601|HBD', 'CON__P02070', 'HBB|p.H144R|1|0.35|ENSG00000244734|chr11:5225611-5225611|T/C|missense_variant'] 103540 16158 SRDDNMFQI True PC9_epitope_Rep4 1124.49205790876 1124.49147496793 70.093 1 -0.21267068150402474 0.05075507270724833 0.9438714419765777 ['ENSG00000113387|ENST00000265073|SUB1'] 45599 10038 ISGQEGMQV True PC9_epitope_Rep3 947.4382314307499 947.43712993586 43.567 2 -0.21267963256396005 0.05075507270724833 0.9438714419765777 ['ENST00000517815.1_1_5:160030929-160033886:-|nuORF'] 32702 9075 GHSGAVMEL True PC9_epitope_Rep4 899.4171020633501 899.41600993586 42.49 2 -0.21270754525078842 0.05077089633030948 0.9438714419765777 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'ENSG00000060688|ENST00000263694|SNRNP40'] 123176 9321 VHGPPVQL True PC9_epitope_Rep6 845.47593726881 845.47484993586 46.024 2 -0.21271265506469061 0.05077089633030948 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 8502 14349 ATVLSPTAV True PC9_epitope_Rep6 857.48583324617 857.48472993586 67.09 2 -0.21273504724245434 0.05077089633030948 0.9438714419765777 ['ENSG00000135744|ENST00000366667|AGT'] 37381 6147 GVYGSFASK True NCI_RA007_Epitope_Rep3 914.4497820906199 914.44868993586 31.173 2 -0.21281244279886397 0.05080633119307153 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 67379 20445 LTDTLHLLI True PC9_epitope_Rep3 1037.61209638845 1037.61098993586 83.897 2 -0.21283523550363015 0.05080633119307153 0.9438714419765777 ['MGAT4B|p.S165L|1|0.17|ENSG00000161013|chr5:179801398-179801398|G/A|missense_variant'] 70381 21146 LYQEIIHYF True PC9_epitope_Rep1 1224.61791004488 1224.6168099358601 86.171 2 -0.21289430075838367 0.05087909216469447 0.9438714419765777 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 65198 19217 LSDWYTMLY True H1975_Epitope_Rep3 1190.53179746242 1190.5307099358602 80.573 2 -0.21292583312727698 0.05087909216469447 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 107555 15559 TADVDFSYL True H1975_Epitope_Rep3 1029.46549172441 1029.46497496793 65.265 1 -0.21295489521871888 0.0508949067766559 0.9438714419765777 ['ENSG00000003509|ENST00000002125|NDUFAF7', 'nc|ENSG00000003509|Q7L592-2|NDUFAF7'] 103197 5262 SQQEHRNMENK True NCI_RA007_Epitope_Rep3 1399.6262599657896 1399.62460490379 27.702 3 -0.21300204401596873 0.0508949067766559 0.9438714419765777 ['ENSG00000198707|ENST00000552810|CEP290'] 120067 15849 VFFVCFAP True PC9_epitope_Rep1 928.4516966669198 928.45058993586 65.776 2 -0.21302863955749954 0.0508949067766559 0.9438714419765777 ['ENSG00000181631|ENST00000325602|P2RY13', 'nc|ENSG00000181631|Q9BPV8-2|P2RY13'] 41191 17172 IAAGIFNDL True NCI_RA007_Epitope_Rep1 932.4967322830399 932.49618496793 70.928 1 -0.21307111754863745 0.05091261990967116 0.9438714419765777 ['ENSG00000136930|ENST00000259457|PSMB7'] 83639 14919 QEAANRRFC True H1975_Epitope_Rep3 1093.50871103241 1093.50760993586 62.772 2 -0.21315032164246348 0.0509676576526137 0.9438714419765777 ['nc|ENSG00000075399|Q9Y2B5-2|VPS9D1', 'ENSG00000075399|ENST00000389386|VPS9D1'] 131190 11196 VVPHLHGQV True PC9_epitope_Rep3 984.5504991914 984.54940993586 48.07 2 -0.21320149743182595 0.05098536876679606 0.9438714419765777 ['ENST00000303277.6_1_4:1718988-1719900:-|nuORF'] 39557 12816 HPHCCLLWTP True PC9_epitope_Rep1 1205.54740504025 1205.54575490379 54.171 3 -0.21321592571414336 0.05100307921993095 0.9438714419765777 ['ENST00000462054.6_2_X:53295593-53296058:-|nuORF'] 42572 13258 IESPPEINT True PC9_epitope_Rep5 998.4920408254201 998.49094993586 56.007 2 -0.21333396756973483 0.05103945060276938 0.9438714419765777 ['CON__P02668'] 90781 17647 RKRRLTKPS True NCI_RA007_Epitope_Rep3 1140.7203584811598 1140.7187249037902 77.379 3 -0.2133968857014532 0.05107582062813742 0.9438714419765777 ['nc|ENSG00000164270|Q13639-4|HTR4'] 96467 8110 SEITDTVAA True NCI_RA007_Epitope_Rep5 905.43419159613 905.43308993586 37.882 2 -0.21351115180665695 0.05111028176898675 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 54643 6015 LADPSAKAV True PC9_epitope_Rep5 870.4810822188999 870.47998993586 28.13 2 -0.21354776742870377 0.05111028176898675 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 111230 10282 TLGFGTEQAP True H1975_Epitope_Rep2 1019.4923751785899 1019.49126993586 44.556 2 -0.2135862854771945 0.05111028176898675 0.9438714419765777 ['ENSG00000157557|ENST00000360938|ETS2'] 13158 19814 DLSTSDEDDLY True H1975_Epitope_Rep3 1271.50412163075 1271.50302993586 82.956 2 -0.21369688360729 0.0511456933870727 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 31720 9120 GEIRTITVV True NCI_RA007_Epitope_Rep5 986.5760452328999 986.57494993586 41.731 2 -0.21371477552150556 0.0511456933870727 0.9438714419765777 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 117443 14016 VADSTFTVL True NCI_RA007_Epitope_Rep4 951.49131254943 951.4907649679301 61.192 1 -0.2137260746557952 0.051160534368236435 0.9438714419765777 ['nc|ENSG00000050748|P45984-5|MAPK9', 'nc|ENSG00000050748|P45984-3|MAPK9', 'nc|ENSG00000050748|P45984-2|MAPK9', 'nc|ENSG00000050748|P45984-4|MAPK9', 'ENSG00000050748|ENST00000452135|MAPK9'] 119663 8391 VESPESLAA True H1975_Epitope_Rep2 901.4392769765699 901.43872496793 37.229 1 -0.2137718976698216 0.051160534368236435 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 100756 22207 SLRNFRMIGSF True PC9_epitope_Rep6 1326.6866753943798 1326.68556993586 98.374 2 -0.21383496589209106 0.051160534368236435 0.9438714419765777 ['ENST00000366844.7_2_1:225684839-225684929:-|nuORF'] 22432 9872 ETFRRWHRKRR True NCI_RA007_Epitope_Rep5 1626.9079930933797 1626.9063449037899 44.619 3 -0.21383999965594686 0.051160534368236435 0.9438714419765777 ['ENST00000416673.6_1_2:114369763-114384446:-|nuORF'] 107670 19320 TAISLFYEL True NCI_RA007_Epitope_Rep4 1055.5539128059902 1055.55280993586 83.554 2 -0.2139294519357792 0.05117346367672848 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 68945 7764 LVFRNGDA True PC9_epitope_Rep1 890.4610154806599 890.45990993586 34.686 2 -0.2139323642790213 0.05117346367672848 0.9438714419765777 ['ENSG00000183066|ENST00000328823|WBP2NL'] 115240 23528 TVDDLAFLL True PC9_epitope_Rep1 1005.53826274185 1005.53716993586 95.289 2 -0.2139357035289298 0.05117346367672848 0.9438714419765777 ['nc|ENSG00000153093|Q9NUZ1-2|ACOXL', 'nc|ENSG00000153093|Q9NUZ1|ACOXL', 'ENSG00000153093|ENST00000439055|ACOXL'] 126916 10249 VPVDTGVAA True PC9_epitope_Rep3 827.4388830537498 827.43778993586 44.373 2 -0.2139980884524698 0.05117346367672848 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 82175 6911 PTEGSVPPP True H1975_Epitope_Rep2 879.4337976733099 879.43324496793 31.504 1 -0.21400729569621044 0.05117346367672848 0.9438714419765777 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'SMPD4|p.K500Sfs*21|2|0.35|ENSG00000136699|chr2:130155169-130155169|G/-|frameshift_variant'] 116737 20358 TYLDNGVVF True PC9_epitope_Rep4 1026.5022115862998 1026.5016749679298 86.449 1 -0.21403869270729983 0.05117346367672848 0.9438714419765777 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000539712.5_1_11:61089040-61094332:-|nuORF', 'ENST00000545930.5_1_11:61082914-61091715:-|nuORF'] 11306 11716 DETLLSAIA True H1975_Epitope_Rep1 931.48622716899 931.4856749679301 50.057 1 -0.21420513531434746 0.051265787362647613 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3', 'nc|ENSG00000071655|O95983-2|MBD3', 'ENST00000590830.5_1_19:1578341-1584901:-|nuORF'] 117332 19964 VAALEQQVL True PC9_epitope_Rep1 969.5494961318899 969.54838993586 81.616 2 -0.21428878153921455 0.051301184590989646 0.9438714419765777 ['nc|ENSG00000095383|Q9BYX2-4|TBC1D2', 'nc|ENSG00000095383|Q9BYX2-3|TBC1D2', 'nc|ENSG00000095383|Q9BYX2-2|TBC1D2', 'ENSG00000095383|ENST00000465784|TBC1D2'] 58202 18554 LESQAVEAL True PC9_epitope_Rep3 958.4971262058599 958.49602993586 76.587 2 -0.2143602279264856 0.051301184590989646 0.9438714419765777 ['nc|ENSG00000170579|O14490-7|DLGAP1', 'ENSG00000170579|ENST00000315677|DLGAP1', 'nc|ENSG00000170579|O14490-3|DLGAP1', 'nc|ENSG00000170579|O14490-2|DLGAP1', 'nc|ENSG00000170579|O14490-4|DLGAP1', 'nc|ENSG00000170579|O14490-6|DLGAP1', 'ENST00000485480.5_1_18:3680126-3742463:-|nuORF', 'ENST00000478161.5_1_18:3722450-3874706:-|nuORF', 'nc|ENSG00000170579|O14490-5|DLGAP1'] 47456 6558 IYIVDRRFRSP True PC9_epitope_Rep6 1420.7939173442398 1420.79227490379 33.911 3 -0.21437387327247784 0.05131888221467746 0.9438714419765777 ['ENSG00000111713|ENST00000261195|GYS2'] 11744 11341 DHHENKYLLL True PC9_epitope_Rep4 1280.65133543148 1280.6502299358601 51.4 2 -0.21441818897578796 0.051336579178092416 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 65508 18702 LSFSMYQSFV True PC9_epitope_Rep6 1207.55834656343 1207.55724993586 84.579 2 -0.21452700531963237 0.05137101287073307 0.9438714419765777 ['ENSG00000189077|ENST00000493111|TMEM120A', 'ENST00000465989.1_1_7:75616979-75617289:-|nuORF', 'ENST00000440632.5_1_7:75616492-75617528:-|nuORF', 'ENST00000417509.5_1_7:75616545-75617528:-|nuORF'] 18745 8669 ELDPDNETY True H1975_Epitope_Rep2 1094.44039917538 1094.4398749679299 38.305 1 -0.2145303827461355 0.05137101287073307 0.9438714419765777 ['ENSG00000104969|ENST00000221566|SGTA'] 138149 18566 YQLKSDKPL True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 76.766 2 -0.21455278597307825 0.05137101287073307 0.9438714419765777 ['ENST00000379520.7_1_2:30369834-30371121:+|nuORF'] 70004 20842 LYGAPGVEF True PC9_epitope_Rep1 951.4701831820299 951.46963496793 84.996 1 -0.21464359924404428 0.05138870754136278 0.9438714419765777 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'LLGL2|p.G740Afs*31|1|0.09|ENSG00000073350|chr17:75571705-75571705|G/-|frameshift_variant', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2'] 138624 11460 YRRGQVVLY True PC9_epitope_Rep5 1152.6403768249597 1152.63874490379 49.079 3 -0.2147225545184048 0.05142505409236738 0.9438714419765777 ['ENSG00000166450|ENST00000389286|PRTG'] 33623 23551 GLLVDDLLV True PC9_epitope_Rep2 955.55899818643 955.5584449679301 96.063 1 -0.2147344910579872 0.051442747094921006 0.9438714419765777 ['ENSG00000047578|ENST00000261588|KATNIP'] 32836 15179 GIGTEIIQV True PC9_epitope_Rep2 928.5229470308799 928.52184993586 63.643 2 -0.21481940627294618 0.051478131120022384 0.9438714419765777 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'nc|ENSG00000165323|Q8TDW7-2|FAT3'] 55445 7015 LATTVRPV True NCI_RA007_Epitope_Rep5 855.5178020807899 855.51670993586 33.663 2 -0.21486968586734287 0.051478131120022384 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 130661 7191 VVAWAARR True PC9_epitope_Rep1 927.5402688608699 927.53916993586 32.473 2 -0.21489585413447115 0.05149198060425215 0.9438714419765777 ['ENST00000354619.9_1_1:236433277-236445243:-|nuORF'] 35320 19182 GSVDILQRWKN True H1975_Epitope_Rep3 1314.7044336335 1314.7033299358602 80.434 2 -0.21489972644320082 0.05149198060425215 0.9438714419765777 ['TGM2|p.R262Q|1|0.17|ENSG00000198959|chr20:38146791-38146791|C/T|missense_variant'] 100461 9677 SLPGSPPSIT True H1975_Epitope_Rep2 954.5022115863001 954.50110993586 42.203 2 -0.21490011852018323 0.05149198060425215 0.9438714419765777 ['ENST00000395105.8_1_15:74472186-74472399:-|nuORF'] 69317 14793 LVPPDQPEV True PC9_epitope_Rep5 992.51786165044 992.51676993586 61.901 2 -0.21491347610257028 0.05149198060425215 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 19942 11482 ELYSQQHRQR True H1975_Epitope_Rep3 1343.66944510711 1343.66779490379 49.288 3 -0.21494087616691665 0.05149198060425215 0.9438714419765777 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 32376 9440 GGETLDQVKMR True H1975_Epitope_Rep3 1232.6183210510399 1232.61722993586 41.312 2 -0.21497438992064175 0.051527358173883854 0.9438714419765777 ['ENSG00000078237|ENST00000179259|TIGAR'] 66743 13062 LSTSELGHL True PC9_epitope_Rep2 955.4974605590301 955.49636993586 55.521 2 -0.21505971479676614 0.051527358173883854 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 103162 8066 SQNMWKRMWRT True PC9_epitope_Rep5 1522.7285572896997 1522.72690490379 35.963 3 -0.2150691367800966 0.05154120126055905 0.9438714419765777 ['ENST00000373491.3_1_6:37259064-37280717:+|nuORF'] 96134 10736 SEDYENLPTS True H1975_Epitope_Rep3 1153.47751296009 1153.4764099358601 46.374 2 -0.21510096598274395 0.05154120126055905 0.9438714419765777 ['ENSG00000147454|ENST00000519973|SLC25A37', 'ENST00000519192.1_1_8:23386515-23389239:+|nuORF', 'nc|ENSG00000147454|Q9NYZ2-2|SLC25A37'] 84187 6087 QESPPAAAV True H1975_Epitope_Rep2 868.4290466460399 868.4279499358599 28.388 2 -0.2151077676356482 0.05154120126055905 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 115568 6909 TVIAKVNNV True PC9_epitope_Rep4 956.5654805492 956.56438993586 33.8 2 -0.21510817862188125 0.05154120126055905 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 106087 14275 SVMPETEEV True PC9_epitope_Rep1 1019.4481274081099 1019.4475749679301 59.733 1 -0.21512956658716126 0.05154120126055905 0.9438714419765777 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 90022 9617 RGGEVYGL True PC9_epitope_Rep2 849.4344663796498 849.43391496793 42.333 1 -0.21517667993911876 0.05155504176610978 0.9438714419765777 ['ENST00000433861.6_2_3:9773506-9775843:+|nuORF', 'ENST00000420291.1_1_3:9773506-9774924:+|nuORF'] 52520 2616 KPPPPPPPP True PC9_epitope_Rep2 922.5276384884999 922.52654993586 14.719 2 -0.21521642037921193 0.05155504176610978 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 31533 13086 GEFGGFGSV True NCI_RA007_Epitope_Rep3 855.3762827971899 855.37518993586 58.756 2 -0.21527613834824522 0.05155504176610978 0.9438714419765777 ['ENSG00000102054|ENST00000380087|RBBP7', 'nc|ENSG00000102054|Q16576-2|RBBP7', 'nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF'] 23915 14094 EYNKSWQTF True PC9_epitope_Rep2 1201.5403880001697 1201.53928993586 59.486 2 -0.2152806991794086 0.05155504176610978 0.9438714419765777 ['ENSG00000198440|ENST00000333201|ZNF583'] 23258 14821 EVRLLKYLF True PC9_epitope_Rep2 1179.70158009919 1179.6999449037899 62.272 3 -0.21528111540898068 0.05155504176610978 0.9438714419765777 ['nc|ENSG00000111581|P57740-3|NUP107', 'nc|ENSG00000111581|P57740-2|NUP107', 'ENSG00000111581|ENST00000229179|NUP107', 'MDM2-NUP107|2|fusion'] 102598 10039 SQANVVVKI True PC9_epitope_Rep4 956.5654805492 956.56438993586 46.279 2 -0.21533610842182657 0.051570802647524935 0.9438714419765777 ['ENSG00000100219|ENST00000344347|XBP1'] 46675 8897 ITVQKKRRDLK True NCI_RA007_Epitope_Rep2 1383.8674166376697 1383.86630993586 39.236 2 -0.2153544345376178 0.051570802647524935 0.9438714419765777 ['ENST00000392914.3_1_12:102517666-102545686:+|nuORF'] 134470 10838 WTRFQWRRRAW True NCI_RA007_Epitope_Rep1 1647.8647312990697 1647.8636299358602 46.152 2 -0.21537013217289658 0.051570802647524935 0.9438714419765777 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 107073 11664 SYLTSASSL True NCI_RA007_Epitope_Rep5 927.45492704071 927.45382993586 51.519 2 -0.21557273873337207 0.051641529484144 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 78289 7879 PASASSSTPVP True PC9_epitope_Rep1 999.48728979815 999.48618993586 35.134 2 -0.21559523489139965 0.051641529484144 0.9438714419765777 ['nc|ENSG00000149294|P13591-3|NCAM1', 'nc|ENSG00000149294|P13591-5|NCAM1'] 55457 9065 LATVTVRP True PC9_epitope_Rep4 855.5178020807899 855.51670993586 42.45 2 -0.21559838281675298 0.051641529484144 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 11063 5803 DDRQREDNRQR True PC9_epitope_Rep3 1486.69851338926 1486.69687490379 27.392 3 -0.21562664686041308 0.051641529484144 0.9438714419765777 ['TNIP3|p.D107N|3|0.25|ENSG00000050730|chr4:121157138-121157138|C/T|missense_variant'] 40767 15839 HVDGFIANV True PC9_epitope_Rep5 970.4872302284999 970.48612993586 65.915 2 -0.2156327609871521 0.05165920954511558 0.9438714419765777 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4', 'ENST00000473864.1_1_3:156528118-156528448:-|nuORF', 'ENST00000414718.1_1_20:12360810-12361446:+|nuORF'] 24719 17498 FAWERVRGL True PC9_epitope_Rep4 1132.6141620771198 1132.61306993586 75.307 2 -0.21570077973622986 0.05167688894688764 0.9438714419765777 ['ENSG00000124762|ENST00000244741|CDKN1A'] 55456 8983 LATVTVRP True PC9_epitope_Rep4 855.5178020807899 855.51670993586 42.108 2 -0.21577839000138221 0.05171320979829238 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 125416 15597 VLTLQIQSL True PC9_epitope_Rep2 1013.61209638845 1013.61098993586 65.271 2 -0.2157929259557136 0.05172703040244562 0.9438714419765777 ['ENST00000484256.1_1_22:29191536-29192243:-|nuORF', 'nc|ENSG00000100219|P17861|XBP1'] 74167 6314 NHYQKQLEI True PC9_epitope_Rep4 1171.5985715826298 1171.59746993586 31.347 2 -0.21580104758278792 0.05172703040244562 0.9438714419765777 ['ENST00000296325.9_1_4:3514703-3533784:-|nuORF', 'ENSG00000163956|ENST00000650182|LRPAP1'] 33822 19761 GLTVVANGGII True PC9_epitope_Rep3 1012.5916952970398 1012.59058993586 81.24 2 -0.21581652412506752 0.05172703040244562 0.9438714419765777 ['ENSG00000181961|ENST00000314721|OR4A16'] 125535 2624 VLWEARRNLK True NCI_RA007_Epitope_Rep5 1283.7462388758297 1283.7445949037901 14.78 3 -0.21582651976307832 0.05172703040244562 0.9438714419765777 ['ENST00000359653.4_1_10:126631759-126631801:+|nuORF'] 112159 10317 TLVGNGKV True PC9_epitope_Rep2 786.4599528515 786.45884993586 45.012 2 -0.21583332836405747 0.05172703040244562 0.9438714419765777 ['ENST00000253039.8_1_X:24094929-24095118:+|nuORF'] 35911 21128 GVAIPLPGV True PC9_epitope_Rep2 821.50108938749 821.5005449679301 86.727 1 -0.21589997181290072 0.05180062630480167 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 49097 18128 KGAAGFSI True PC9_epitope_Rep5 749.4071890026501 749.40608993586 74.739 2 -0.21600036855054644 0.05181830043430446 0.9438714419765777 ['ENSG00000144029|ENST00000272418|MRPS5'] 112718 12772 TPHPFPAV True PC9_epitope_Rep5 864.4493881678 864.44828993586 54.136 2 -0.21603868807022503 0.05183500773517735 0.9438714419765777 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 78043 5834 PALPPQAH True PC9_epitope_Rep3 829.44463714053 829.44354993586 27.508 2 -0.2160463090461552 0.05183500773517735 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 45748 10489 ISNEFKVEV True PC9_epitope_Rep2 1063.5549754351498 1063.5538699358601 45.668 2 -0.21608368199330147 0.051852680235592336 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 81629 16229 PRRLRRRRLLP True H1975_Epitope_Rep2 1487.9749504543897 1487.97331490379 67.635 3 -0.21620584559409547 0.051884155205188416 0.9438714419765777 ['ENST00000360807.8_2_20:17641169-17662761:-|nuORF', 'ENST00000377813.5_2_20:17660668-17662761:-|nuORF'] 102194 6958 SPSLGSLMY True H1975_Epitope_Rep3 953.45281886573 953.45172993586 31.725 2 -0.2162279145438448 0.051884155205188416 0.9438714419765777 ['ENSG00000181961|ENST00000314721|OR4A16', 'OR4A16|p.P181Hfs*13|1|0.24|ENSG00000181961|chr11:55343740-55343740|C/-|frameshift_variant'] 137440 18155 YLNDEELIT True PC9_epitope_Rep4 1108.52882025696 1108.5277299358602 77.897 2 -0.2162562927119272 0.051884155205188416 0.9438714419765777 ['ENSG00000277363|ENST00000617146|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-2|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-4|SRCIN1'] 99344 12840 SLDRQLTGL True PC9_epitope_Rep4 1001.55055876105 1001.54946993586 57.254 2 -0.21626762109008824 0.051884155205188416 0.9438714419765777 ['ENSG00000168434|ENST00000307149|COG7'] 134805 11756 WYQTKFETL True NCI_RA007_Epitope_Rep3 1214.5971746002997 1214.5960699358602 53.352 2 -0.21626956053487503 0.051884155205188416 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 131871 14786 VYDPLSKRW True PC9_epitope_Rep1 1162.61349337078 1162.6118549037901 61.693 3 -0.21627129927182565 0.051884155205188416 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 81964 9406 PSQPVVTEITK True NCI_RA007_Epitope_Rep5 1197.6605031328497 1197.6594099358601 42.819 2 -0.21628175104665698 0.051900857249347745 0.9438714419765777 ['nc|ENSG00000154134|Q96MS0-2|ROBO3', 'ENSG00000154134|ENST00000397801|ROBO3'] 38106 7067 HEPEPHIL True PC9_epitope_Rep2 970.4872302285 970.48612993586 32.581 2 -0.21633660628358056 0.051900857249347745 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 58531 22411 LFCCGAGFFI True PC9_epitope_Rep2 1076.4823451721998 1076.4812499358602 91.698 2 -0.21639206308953002 0.051937161066696484 0.9438714419765777 ['nc|ENSG00000154978|Q96AW1-4|VOPP1', 'nc|ENSG00000154978|Q96AW1-2|VOPP1', 'nc|ENSG00000154978|Q96AW1-3|VOPP1', 'ENSG00000154978|ENST00000285279|VOPP1'] 30231 19087 GAAAFFTAV True PC9_epitope_Rep6 853.4334037504899 853.43230993586 86.062 2 -0.21642288688148945 0.051949987888273985 0.9438714419765777 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 58636 8832 LFGDHYDTM True NCI_RA007_Epitope_Rep4 1097.4487961144503 1097.4476899358601 40.782 2 -0.2164230072608227 0.051949987888273985 0.9438714419765777 ['ENSG00000174607|ENST00000310836|UGT8'] 12396 18878 DKEIEVRNAV True H1975_Epitope_Rep1 1171.6197009500302 1171.6186099358601 78.718 2 -0.21643031393676002 0.051949987888273985 0.9438714419765777 ['ENST00000575787.1_1_17:6802758-6803315:+|nuORF'] 86889 11166 QRRQVHRRLRH True NCI_RA007_Epitope_Rep1 1540.9035764192797 1540.9019249037901 47.432 3 -0.21651351092310506 0.051949987888273985 0.9438714419765777 ['ENST00000401884.5_2_2:241974133-241976762:+|nuORF'] 30621 18846 GALAQERRF True PC9_epitope_Rep3 1046.5621265042598 1046.56102993586 77.713 2 -0.21658768938229556 0.051949987888273985 0.9438714419765777 ['nc|ENSG00000105492|O43699-4|SIGLEC6', 'nc|ENSG00000105492|O43699-2|SIGLEC6', 'nc|ENSG00000105492|O43699-5|SIGLEC6', 'ENST00000489837.1_1_19:52032900-52035046:-|nuORF', 'nc|ENSG00000105492|O43699-3|SIGLEC6', 'ENSG00000105492|ENST00000425629|SIGLEC6'] 21957 8110 ESLKELHVF True NCI_RA007_Epitope_Rep3 1100.5866099165999 1100.58550993586 39.005 2 -0.21661771387569034 0.051949987888273985 0.9438714419765777 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2', 'nc|ENSG00000137501|Q9HCH5-12|SYTL2', 'nc|ENSG00000137501|Q9HCH5-4|SYTL2', 'nc|ENSG00000137501|Q9HCH5-9|SYTL2', 'nc|ENSG00000137501|Q9HCH5-2|SYTL2'] 12850 15239 DLLDVSGCDLY True H1975_Epitope_Rep2 1211.53800504167 1211.5369099358602 63.775 2 -0.21664947395554812 0.05196281184208075 0.9438714419765777 ['ENST00000610164.1_1_7:112724279-112724519:-|nuORF'] 78661 12872 PEALEAQV True PC9_epitope_Rep6 855.4337976733099 855.43324496793 61.031 1 -0.2166883280793742 0.05196281184208075 0.9438714419765777 ['nc|ENSG00000148337|Q9ULV3-5|CIZ1', 'nc|ENSG00000148337|Q9ULV3-3|CIZ1', 'nc|ENSG00000148337|Q9ULV3-4|CIZ1', 'nc|ENSG00000148337|Q9ULV3-2|CIZ1', 'ENSG00000148337|ENST00000372938|CIZ1'] 88182 7359 QWWKKRRRR True NCI_RA007_Epitope_Rep4 1398.8221382110999 1398.82048490379 34.946 3 -0.21674539620601516 0.05196281184208075 0.9438714419765777 ['ENST00000324344.8_1_16:20911624-20911678:-|nuORF'] 75132 11211 NMYGKVVTV True PC9_epitope_Rep4 1009.52665251233 1009.52554993586 50.9 2 -0.21676811205430105 0.05196281184208075 0.9438714419765777 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 39257 16176 HLMKNLCL True PC9_epitope_Rep5 970.5092286263799 970.50812993586 67.211 2 -0.21681402348362383 0.05196281184208075 0.9438714419765777 ['ENST00000442441.5_1_21:34841172-34852188:-|nuORF'] 71907 11354 MPQSGTGVSV True PC9_epitope_Rep3 961.45388149489 961.45333496793 48.677 1 -0.21682834273548118 0.05196281184208075 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 72481 16334 MVADRFSEL True PC9_epitope_Rep1 1066.5117307241799 1066.5106299358602 67.647 2 -0.21690422308747015 0.05199910571226292 0.9438714419765777 ['nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 1627 9100 AEFVEVTK True PC9_epitope_Rep1 921.4807478657299 921.47964993586 39.854 2 -0.21691248485693662 0.052015798494671736 0.9438714419765777 ['CON__P02769'] 122480 13479 VGSPYWMAP True PC9_epitope_Rep2 1006.4582385993399 1006.45714993586 57.132 2 -0.2169434879178215 0.052015798494671736 0.9438714419765777 ['ENSG00000107140|ENST00000336395|TESK1'] 32870 20810 GILGNGLVI True PC9_epitope_Rep4 854.5225531080599 854.52144993586 88.196 2 -0.2170110429704928 0.05205208934925573 0.9438714419765777 ['nc|ENSG00000174600|Q99788-2|CMKLR1', 'ENSG00000174600|ENST00000550402|CMKLR1'] 120357 24256 VFQWSFSALLI True PC9_epitope_Rep1 1309.7070594024499 1309.7059699358601 98.12 2 -0.21712973388320014 0.05212466700199333 0.9438714419765777 ['ENSG00000147160|ENST00000276101|AWAT2'] 35755 9901 GTVDTGSLACS True PC9_epitope_Rep5 1009.4386253535699 1009.43752993586 43.054 2 -0.21714506006008363 0.05212466700199333 0.9438714419765777 ['ENST00000480614.1_1_6:43746820-43747063:+|nuORF'] 12685 16313 DLEYFECSNVP True H1975_Epitope_Rep2 1314.5438186980998 1314.54272993586 67.965 2 -0.21720639916063722 0.05214232488822653 0.9438714419765777 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-5|TACC1', 'nc|ENSG00000147526|O75410-4|TACC1', 'nc|ENSG00000147526|O75410-6|TACC1', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 78069 21053 PALQVSVAL True PC9_epitope_Rep3 896.5331177917599 896.53202993586 86.26 2 -0.2174140561279089 0.05217861068161919 0.9438714419765777 ['ENST00000586558.5_1_19:14523585-14524032:-|nuORF'] 54894 13663 LAGPAELL True H1975_Epitope_Rep1 782.4538048418999 782.4532549679301 57.689 1 -0.21750260124541354 0.052196266905107855 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 45085 6302 IQRTPKIQVYS True H1975_Epitope_Rep1 1331.75613485319 1331.7544949037901 29.307 3 -0.21757323795508948 0.052212949854705315 0.9438714419765777 ['ENSG00000166710|ENST00000648006|B2M', 'ENST00000559720.5_1_15:45003705-45007919:+|nuORF', 'B2M|p.P34Ffs*15|1|0.37|ENSG00000166710|chr15:44715455-44715477|CCAGCAGAGAATGGAAAGTCAAA/-|frameshift_variant'] 104622 11041 SSVPGVRLL True NCI_RA007_Epitope_Rep4 926.5549158655 926.55380993586 49.342 2 -0.21757368329658183 0.052212949854705315 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 12543 6817 DLCNNPMTKEP True H1975_Epitope_Rep1 1260.54785853272 1260.54676993586 31.264 2 -0.21760554781145766 0.05222865870694954 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 38843 13051 HIGDAVVI True PC9_epitope_Rep2 822.4599528515 822.45940496793 55.481 1 -0.2176063848433767 0.05222865870694954 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 128498 4910 VSFRRDHLL True NCI_RA007_Epitope_Rep3 1141.63562579769 1141.63399490379 26.303 3 -0.21761398459435158 0.05222865870694954 0.9438714419765777 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENSG00000118217|ENST00000367942|ATF6'] 57076 4312 LEEKSRLVSA True H1975_Epitope_Rep2 1130.62953735774 1130.62789490379 21.697 3 -0.21768354787449096 0.052261044475899576 0.9438714419765777 ['ENSG00000128683|ENST00000358196|GAD1', 'nc|ENSG00000128683|Q99259-3|GAD1', 'nc|ENSG00000128683|Q99259-4|GAD1'] 132684 5471 VYRQLHNSLDP True NCI_RA007_Epitope_Rep2 1340.68369818892 1340.68204490379 25.898 3 -0.21771677584726842 0.052261044475899576 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1'] 130055 12447 VTQDGTPITVP True H1975_Epitope_Rep1 1126.58700383942 1126.5859099358602 52.914 2 -0.2177245005276192 0.052261044475899576 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 126353 6042 VPLAGAAG True NCI_RA007_Epitope_Rep5 654.37007521794 654.36952496793 29.922 1 -0.21776087123601653 0.052261044475899576 0.9438714419765777 ['ENSG00000125835|ENST00000381342|SNRPB', 'nc|ENSG00000125835|P14678|SNRPB', 'ENSG00000128739|ENST00000390687|SNRPN', 'nc|ENSG00000128739|P63162-2|SNRPN', 'nc|ENSG00000125835|P14678-3|SNRPB'] 131990 10575 VYGKVDSF True PC9_epitope_Rep5 913.4545331178899 913.45342993586 45.665 2 -0.21778496577229817 0.052261044475899576 0.9438714419765777 ['ENSG00000152127|ENST00000281923|MGAT5'] 77583 9160 NYSTVPQKQTL True PC9_epitope_Rep5 1277.6615657620098 1277.6604699358602 40.181 2 -0.2178186126188869 0.05227772190561329 0.9438714419765777 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14'] 31790 14586 GELTMTFPA True H1975_Epitope_Rep2 965.4528188657299 965.4522749679301 61.261 1 -0.2178214113071962 0.05227772190561329 0.9438714419765777 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 34122 7338 GPAQSPLQS True PC9_epitope_Rep2 883.4399456829099 883.4393949679301 33.607 1 -0.21786200679427173 0.05229245037059108 0.9438714419765777 ['MAGEC1|p.P802T|2|0.29|ENSG00000155495|chrX:141907808-141907808|C/A|missense_variant', 'MAGEC1|p.L915Ffs*41|1|0.44|ENSG00000155495|chrX:141908146-141908147|-/T|frameshift_variant', 'MAGEC1|p.Q996Rfs*5|1|0.11|ENSG00000155495|chrX:141908388-141908388|C/-|frameshift_variant', 'ENSG00000155495|ENST00000285879|MAGEC1'] 116860 13347 TYNKHINISF True PC9_epitope_Rep5 1235.62987171091 1235.62822490379 56.354 3 -0.21786532752315596 0.05229245037059108 0.9438714419765777 ['ENSG00000173451|ENST00000308086|THAP2'] 9828 18900 AYLKGTVLF True PC9_epitope_Rep2 1010.5800679841799 1010.5794749679301 78.063 1 -0.21790311641085044 0.05229245037059108 0.9438714419765777 ['nc|ENSG00000169297|P51843-2|NR0B1', 'ENSG00000169297|ENST00000378970|NR0B1'] 72442 4354 [Acetylation]-M[Oxidation]TM[Oxidation]DKSELVQK True H1975_Epitope_Rep3 1382.64215391756 1382.64104993586 21.865 2 -0.2179252637290488 0.05229245037059108 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB'] 78248 5827 PAQSSLYEAR True H1975_Epitope_Rep3 1120.5512870370399 1120.55018993586 27.434 2 -0.21806516728498354 0.05230912476722532 0.9438714419765777 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 130779 15312 VVEIRNFL True PC9_epitope_Rep2 988.57056592964 988.56946993586 64.179 2 -0.21806888803288052 0.05230912476722532 0.9438714419765777 ['ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 45500 11872 ISERQAEVL True PC9_epitope_Rep2 1043.56112344475 1043.56057496793 50.991 1 -0.21816027177098443 0.05232482356665363 0.9438714419765777 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 92063 5541 RPRVTEPISA True PC9_epitope_Rep4 1124.6302060640799 1124.62855490379 28.077 3 -0.21816303112685778 0.05232482356665363 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 132541 20123 VYPGLAVFF True NCI_RA007_Epitope_Rep4 1011.5429541994698 1011.5423749679301 87.063 1 -0.21817697543904013 0.05232482356665363 0.9438714419765777 ['ENST00000442441.5_1_21:34823127-34828329:-|nuORF', 'ENSG00000142188|ENST00000542230|TMEM50B'] 100997 20795 SLSYSFQV True PC9_epitope_Rep3 929.44944773745 929.44834993586 85.259 2 -0.2182389711304327 0.0523405206122221 0.9438714419765777 ['ENST00000551241.5_2_12:113369698-113369791:+|nuORF'] 44881 9983 IQDDAVHTL True PC9_epitope_Rep3 1010.50327421546 1010.50216993586 43.355 2 -0.2182492129076688 0.0523405206122221 0.9438714419765777 ['ENSG00000115816|ENST00000234170|CEBPZ'] 91510 6132 RPAAGFVA True PC9_epitope_Rep2 787.4340724568299 787.43296993586 28.981 2 -0.2182571673654546 0.0523405206122221 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 80778 7888 PLSPEEECR True NCI_RA007_Epitope_Rep2 1058.47025983502 1058.46916993586 35.314 2 -0.2183131178565164 0.05235816560224924 0.9438714419765777 ['ENST00000377735.7_1_19:46286802-46287057:-|nuORF'] 25056 11582 FDDPLLGPR True H1975_Epitope_Rep3 1028.52909504048 1028.5279899358602 49.679 2 -0.21850099928053782 0.05243069131802863 0.9438714419765777 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'nc|ENSG00000133706|Q9P2J5-3|LARS1'] 78261 5340 PARLPAAPA True PC9_epitope_Rep4 862.5024863698198 862.50138993586 27.257 2 -0.2185154420803404 0.05243069131802863 0.9438714419765777 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 24168 14534 EYTEKMVSI True PC9_epitope_Rep3 1098.52671208198 1098.52560993586 61.025 2 -0.21869227434885916 0.05250418916402905 0.9438714419765777 ['ENSG00000126749|ENST00000599672|EMG1'] 35419 8005 GTDHLPVLFK True NCI_RA007_Epitope_Rep4 1125.61824439805 1125.6166049037902 37.559 3 -0.21874012664594955 0.052521829792779876 0.9438714419765777 ['ENSG00000181378|ENST00000341552|CFAP65'] 21829 5038 ESDTHMTLP True H1975_Epitope_Rep3 1029.44371073401 1029.4426099358602 24.499 2 -0.218884172641908 0.0525336013999032 0.9438714419765777 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'nc|ENSG00000048028|Q96RU2-3|USP28', 'USP28|p.D632Efs*4|1|0.14|ENSG00000048028|chr11:113812336-113812352|TCAGGCCTCCATAGGAA/-|frameshift_variant'] 88359 12404 QYMKIISSF True NCI_RA007_Epitope_Rep3 1115.5685173243098 1115.56740993586 55.997 2 -0.21889242411858584 0.0525336013999032 0.9438714419765777 ['ENSG00000170606|ENST00000304858|HSPA4', 'ENST00000514825.1_1_5:132437411-132440125:+|nuORF'] 31385 5145 GEASPPAPP True H1975_Epitope_Rep1 821.3919328613299 821.39082993586 24.858 2 -0.21891069972326302 0.0525336013999032 0.9438714419765777 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 13388 7415 DNIQTVKRLRT True NCI_RA007_Epitope_Rep1 1342.7680965192199 1342.76644490379 32.839 3 -0.21891556112534957 0.0525336013999032 0.9438714419765777 45828 9222 ISPTGWNNV True NCI_RA007_Epitope_Rep5 986.4821448480601 986.48104993586 42.123 2 -0.21895250124787777 0.0525336013999032 0.9438714419765777 ['nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'ENSG00000134955|ENST00000403796|SLC37A2', 'nc|ENSG00000134955|Q8TED4-4|SLC37A2'] 35350 12016 GTADALGL True NCI_RA007_Epitope_Rep2 716.37046914076 716.36992496793 51.33 1 -0.21897691095930297 0.0525336013999032 0.9438714419765777 ['ENSG00000100151|ENST00000356976|PICK1', 'PICK1|p.A306Pfs*108|1|0.36|ENSG00000100151|chr22:38074382-38074383|GC/-|frameshift_variant', 'nc|ENSG00000100151|Q9NRD5-2|PICK1', 'ENST00000484021.5_1_22:38453431-38470088:+|nuORF'] 12272 16785 DISDVFEMP True PC9_epitope_Rep3 1051.45321278855 1051.45210993586 69.711 2 -0.2189896139027767 0.0525336013999032 0.9438714419765777 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 101086 21708 SLTVFQEQTL True PC9_epitope_Rep1 1164.6026539035597 1164.60154993586 88.332 2 -0.21905578111802926 0.052551238854036744 0.9438714419765777 ['ENST00000360632.7_1_3:149238680-149238722:-|nuORF'] 105287 16289 STTNGGILTV True PC9_epitope_Rep1 961.50802524273 961.5074749679301 67.474 1 -0.2191477228082484 0.052567897097969135 0.9438714419765777 ['nc|ENSG00000122068|Q96QD9-3|FYTTD1', 'nc|ENSG00000122068|Q96QD9-2|FYTTD1', 'ENSG00000122068|ENST00000241502|FYTTD1'] 35289 12447 GSQSGSFSF True PC9_epitope_Rep1 902.3770110731799 902.37646496793 52.742 1 -0.2191491055200307 0.052567897097969135 0.9438714419765777 ['ENST00000550078.2_2_1:203764956-203765340:+|nuORF'] 28794 17338 FTDEEVDELYR True PC9_epitope_Rep5 1414.6252398229399 1414.62358490379 71.69 3 -0.21916962833832287 0.05258553292878151 0.9438714419765777 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 78031 5847 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 27.304 2 -0.21921551496265923 0.05260218896582533 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 56852 15984 LEDGKMILAS True H1975_Epitope_Rep1 1075.55834656343 1075.5577749679298 66.814 1 -0.21923530542692266 0.05260218896582533 0.9438714419765777 ['ENST00000473607.5_1_3:125854214-125879740:-|nuORF', 'nc|ENSG00000144908|O75891-4|ALDH1L1', 'nc|ENSG00000144908|O75891-2|ALDH1L1', 'ENSG00000144908|ENST00000393434|ALDH1L1', 'nc|ENSG00000144908|O75891-3|ALDH1L1'] 11099 5095 DEDKEKTFEEK True NCI_RA007_Epitope_Rep2 1396.6358045066397 1396.6347099358602 24.442 2 -0.21926081277335593 0.052618843762796415 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 109530 18968 THALEWPSL True PC9_epitope_Rep4 1052.52909504048 1052.5279899358602 81.05 2 -0.21930139082846614 0.052618843762796415 0.9438714419765777 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF', 'ENST00000465780.1_1_1:33116898-33117663:+|nuORF', 'ENST00000524393.5_1_1:33116898-33134621:+|nuORF'] 43659 11768 IILPQKHI True NCI_RA007_Epitope_Rep2 960.6120368187999 960.61092993586 50.373 2 -0.21941018484289984 0.05263255848579033 0.9438714419765777 ['chrX:108722523-108732579|185|24.68|0.7|5.14|-|1|IRS4,IRS4|3'] 38121 6711 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 34.585 2 -0.21948235908306252 0.05263255848579033 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 5066 13508 ALLMLVFRYKR True H1975_Epitope_Rep1 1408.83769673252 1408.83658993586 57.078 2 -0.21950824594038068 0.05263255848579033 0.9438714419765777 ['MUC17|p.S4416Y|1|0.06|ENSG00000169876|chr7:101053129-101053129|C/A|missense_variant'] 77965 10715 PALEGAAPVGT True H1975_Epitope_Rep2 981.5131106231698 981.51200993586 46.241 2 -0.21951618601451156 0.05263255848579033 0.9438714419765777 ['ENST00000466543.1_1_7:6210722-6211705:-|nuORF', 'ENST00000478541.1_1_7:6210722-6217545:-|nuORF'] 62616 9963 LLVLHLSHNR True NCI_RA007_Epitope_Rep2 1200.70912509112 1200.7080299358602 43.381 2 -0.21952459319451928 0.05263255848579033 0.9438714419765777 ['ENSG00000188783|ENST00000343110|PRELP'] 44543 13571 IPATPGIGA True PC9_epitope_Rep1 795.4490538146299 795.44794993586 57.056 2 -0.21954479487675105 0.052683489653118955 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 102257 6602 SPTGKEFVSA True PC9_epitope_Rep4 1021.5080252427299 1021.50692993586 32.554 2 -0.21966292080889702 0.052683489653118955 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000495256.1_1_7:105766642-105766726:+|nuORF'] 55460 8535 LATVTVRP True PC9_epitope_Rep6 855.5178020807899 855.51670993586 42.581 2 -0.2196719501945325 0.052683489653118955 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 115103 6232 TTVKNSSLL True PC9_epitope_Rep1 961.54441075145 961.54330993586 28.784 2 -0.21967895197244833 0.052683489653118955 0.9438714419765777 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 77739 6661 PAAPAVSQA True PC9_epitope_Rep5 810.4235673427801 810.42246993586 30.593 2 -0.21968764153572387 0.052683489653118955 0.9438714419765777 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 46049 21306 ISWAIYYL True PC9_epitope_Rep4 1027.53786881903 1027.53676993586 90.121 2 -0.2197322081820403 0.052719727562015 0.9438714419765777 ['ENSG00000157103|ENST00000287766|SLC6A1'] 80375 11443 PLGSDGPAVT True PC9_epitope_Rep1 912.4552613938799 912.45416993586 48.893 2 -0.2197735848355999 0.05273735531653578 0.9438714419765777 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'nc|ENSG00000183337|Q6W2J9-3|BCOR', 'ENST00000490976.5_1_X:39931586-39937182:-|nuORF', 'BCOR|p.F914I|1|0.09|ENSG00000183337|chrX:40072606-40072606|A/T|missense_variant'] 25446 11944 FELTGIPPAPR True H1975_Epitope_Rep1 1196.6553581827598 1196.6542699358602 50.947 2 -0.21980724918331573 0.05277260885746185 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'ENST00000532091.1_1_11:122929265-122929517:-|nuORF', 'ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 135007 10719 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.38026993586 46.546 2 -0.21983138739807584 0.05277260885746185 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 17105 5563 EGSELCLEP True H1975_Epitope_Rep3 975.4219126602699 975.42080993586 26.439 2 -0.21993946340857523 0.052807859774478064 0.9438714419765777 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 73940 11692 NHLDSHLLL True PC9_epitope_Rep4 1060.56654317836 1060.5654499358602 52.736 2 -0.22001238467614656 0.052807859774478064 0.9438714419765777 ['DCAF4L2|p.D298Tfs*2|1|0.22|ENSG00000176566|chr8:87873080-87873080|C/-|frameshift_variant', 'ENSG00000176566|ENST00000319675|DCAF4L2', 'DCAF4L2|p.L135Q|1|0.34|ENSG00000176566|chr8:87873568-87873568|A/T|missense_variant', 'DCAF4L2|p.Q181Rfs*12|2|0.29|ENSG00000176566|chr8:87873431-87873431|G/-|frameshift_variant'] 118040 7716 VATFSSPEQK True NCI_RA007_Epitope_Rep1 1092.54513902744 1092.5440499358601 34.006 2 -0.22005663925221125 0.052825484249111515 0.9438714419765777 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 69350 4449 LVQADEKEANV True NCI_RA007_Epitope_Rep2 1214.6142812164198 1214.6131899358602 21.939 2 -0.22014989738684626 0.05284310806787734 0.9438714419765777 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 28046 15986 FRDAFTQEL True PC9_epitope_Rep4 1125.54547338061 1125.54436993586 69.424 2 -0.22015821940605124 0.052859747702154576 0.9438714419765777 ['ENSG00000270170|ENST00000602845|NCBP2AS2'] 36290 19274 GVGPVNISV True PC9_epitope_Rep2 840.4705175352 840.46942993586 79.511 2 -0.2201681023893623 0.052859747702154576 0.9438714419765777 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'CON__Q922U2'] 106628 8084 SWRRRDFL True PC9_epitope_Rep4 1134.60466002258 1134.60301490379 38.546 3 -0.22031841233991623 0.05287736989971533 0.9438714419765777 ['ENSG00000132793|ENST00000373257|LPIN3', 'nc|ENSG00000132793|Q9BQK8-2|LPIN3'] 90580 4881 RKHWIANNL True NCI_RA007_Epitope_Rep3 1150.63596015086 1150.63432490379 26.185 3 -0.22045808414014276 0.05291359678499665 0.9438714419765777 ['nc|ENSG00000101294|Q8TCT9|HM13', 'nc|ENSG00000101294|Q8TCT9-4|HM13', 'ENSG00000101294|ENST00000398174|HM13', 'ENST00000464173.5_1_20:30136866-30137929:+|nuORF', 'ENST00000483310.5_1_20:30136863-30150236:+|nuORF', 'ENST00000472128.5_1_20:30136905-30155443:+|nuORF', 'ENST00000492709.5_1_20:30132820-30157019:+|nuORF', 'ENST00000460389.5_1_20:30136650-30157019:+|nuORF'] 116371 13865 TVYMDTALE True H1975_Epitope_Rep2 1041.4688628526899 1041.4677699358601 58.477 2 -0.22049122254282033 0.05293121732497349 0.9438714419765777 ['CADPS2|p.D886Y|1|0.31|ENSG00000081803|chr7:122407630-122407630|C/A|missense_variant'] 116651 20908 TYIPGTQITF True PC9_epitope_Rep4 1139.58627556343 1139.5857749679299 88.582 1 -0.22071255122996566 0.053023255813953486 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF'] 23923 18758 EYNNIQHLF True PC9_epitope_Rep5 1176.5563724174801 1176.55526993586 77.163 2 -0.22075125315801086 0.05303988688792975 0.9438714419765777 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 4845 23078 ALFGALFLA True PC9_epitope_Rep4 921.5323895157699 921.53128993586 96.992 2 -0.22076434795018088 0.05303988688792975 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 31789 14478 GELTMTFPA True H1975_Epitope_Rep1 965.4528188657299 965.4522749679301 60.889 1 -0.22086395489200628 0.0530565167243368 0.9438714419765777 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 130024 18547 VTPPSVPGI True PC9_epitope_Rep2 865.49091862661 865.48982993586 76.692 2 -0.22087326374630825 0.0530565167243368 0.9438714419765777 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 121486 9273 VGKDSYVEL True NCI_RA007_Epitope_Rep4 1008.5127762699999 1008.51166993586 42.522 2 -0.22093485909704158 0.053074132638824295 0.9438714419765777 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3'] 42406 21620 IEPGFVFII True H1975_Epitope_Rep1 1033.5848190114498 1033.5837299358602 89.851 2 -0.2209559596735455 0.0531093625016277 0.9438714419765777 ['nc|ENSG00000066230|P48764-2|SLC9A3', 'ENSG00000066230|ENST00000264938|SLC9A3'] 11971 20291 DHTVGFIL True PC9_epitope_Rep1 900.4705175351999 900.4699649679301 82.876 1 -0.2209633497796112 0.0531093625016277 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 6504 12536 APTPGLLQ True PC9_epitope_Rep4 795.4490538146299 795.44794993586 56.039 2 -0.2209919212395416 0.05313668235162832 0.9438714419765777 ['ENSG00000021762|ENST00000263650|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5', 'ENST00000498536.5_1_11:3109437-3111932:-|nuORF'] 140292 12558 YYDKHFTEF True PC9_epitope_Rep2 1248.54513902744 1248.54349490379 53.611 3 -0.22100083124058542 0.05313668235162832 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 55854 6551 LDFEVSPRLR True NCI_RA007_Epitope_Rep4 1230.67207087606 1230.67042490379 31.811 3 -0.22107858419054335 0.05313668235162832 0.9438714419765777 ['ENSG00000166341|ENST00000299441|DCHS1'] 76691 12195 NTLGVTVLS True PC9_epitope_Rep6 902.50729696674 902.50618993586 58.273 2 -0.22110371922620622 0.05313668235162832 0.9438714419765777 ['ENSG00000100104|ENST00000215917|SRRD'] 111890 8049 TLRRKIEEEWK True NCI_RA007_Epitope_Rep1 1486.82561139534 1486.82395490379 35.306 3 -0.22112647193978183 0.05313668235162832 0.9438714419765777 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 13387 6887 DNIQTVKRLRT True H1975_Epitope_Rep1 1342.7680965192199 1342.76644490379 31.535 3 -0.22113090092826476 0.05313668235162832 0.9438714419765777 33466 17709 GLGPLQLAV True PC9_epitope_Rep6 866.5225531080599 866.52144993586 80.751 2 -0.22116159698262025 0.05313668235162832 0.9438714419765777 ['ENST00000585457.5_1_17:42253853-42254417:-|nuORF'] 82262 15660 PTLSSSPEI True PC9_epitope_Rep4 929.47057710485 929.46948993586 68.162 2 -0.22116756776405855 0.05313668235162832 0.9438714419765777 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF', 'ENST00000507162.1_1_5:82837792-82840785:+|nuORF'] 78349 4871 PATLRLARPAP True NCI_RA007_Epitope_Rep3 1161.6982260542497 1161.6965849037902 26.144 3 -0.2211700084689417 0.05313668235162832 0.9438714419765777 ['ENST00000282928.4_1_3:147127600-147127744:+|nuORF'] 27058 21384 FLPAGIVAV True PC9_epitope_Rep2 885.53238951577 885.53128993586 87.725 2 -0.22117855103864362 0.05313668235162832 0.9438714419765777 ['nc|ENSG00000122882|O95905-2|ECD', 'ENSG00000122882|ENST00000372979|ECD', 'nc|ENSG00000122882|O95905-3|ECD'] 98097 16179 SHYYDYPSI True PC9_epitope_Rep1 1143.48728979815 1143.48618993586 67.047 2 -0.22120813777017515 0.053209098179248265 0.9438714419765777 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 47796 20347 IYQTWLKNL True PC9_epitope_Rep3 1177.64954452633 1177.64844993586 83.513 2 -0.2212085216559215 0.053209098179248265 0.9438714419765777 ['ENST00000507606.2_1_7:135347283-135358947:+|nuORF'] 138174 14855 YQNQGIYQV True PC9_epitope_Rep5 1111.52982331647 1111.52927496793 62.141 1 -0.2213831759945679 0.053278536095510844 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9', 'nc|ENSG00000111859|Q14511-2|NEDD9', 'ENST00000448183.6_1_6:11200558-11306280:-|nuORF'] 8 6084 AAAAAAAAAAA True PC9_epitope_Rep5 799.41881631551 799.41770993586 28.392 2 -0.221391637776344 0.053278536095510844 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 62786 4465 LMDHYEPCYIK True NCI_RA007_Epitope_Rep2 1410.63119423386 1410.62953490379 22.001 3 -0.2213934997540266 0.053278536095510844 0.9438714419765777 ['LRIG3|p.S963C|1|0.57|ENSG00000139263|chr12:58874283-58874283|T/A|missense_variant'] 85640 13515 QLQAELRSL True PC9_epitope_Rep5 1056.5927579262 1056.5916699358602 57.006 2 -0.22139589507171092 0.053278536095510844 0.9438714419765777 ['nc|ENSG00000161944|P07307-3|ASGR2', 'nc|ENSG00000161944|P07307-2|ASGR2', 'ENSG00000161944|ENST00000691900|ASGR2', 'nc|ENSG00000161944|P07307|ASGR2', 'ENST00000576487.5_1_17:7011095-7018009:-|nuORF'] 7711 5840 ASQRAEIAA True PC9_epitope_Rep6 915.4773938207898 915.47628993586 30.681 2 -0.22141835308727675 0.053278536095510844 0.9438714419765777 ['SVA_E_dup408|chr10:31969059-31970051:+|2.2329970574096665|0.275459818795955|3.02|498.0|19|3|sense'] 130880 8134 VVGVGQVGM[Oxidation]AC-[Carbamidomethyl] True H1975_Epitope_Rep1 1091.5103514850598 1091.50924993586 36.225 2 -0.22151534445715576 0.05331473733147373 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000544151.1_1_12:21807353-21810687:-|nuORF'] 138696 12165 YRTTVYHPF True PC9_epitope_Rep1 1182.5821932425 1182.58054490379 51.656 3 -0.22161827503042403 0.053368540454097474 0.9438714419765777 ['ENST00000535589.3_1_2:114648352-114674470:+|nuORF', 'ENST00000263238.6_1_2:114647705-114674470:+|nuORF', 'ENST00000415792.5_1_2:114647705-114688890:+|nuORF', 'ENST00000446821.5_1_2:114647705-114684940:+|nuORF'] 78047 4969 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 25.718 2 -0.22168264402651838 0.053368540454097474 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 122755 12393 VGVFIEQPTP True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 52.699 2 -0.22170986136363813 0.05338614303246681 0.9438714419765777 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 71655 22046 MLSALQVAL True PC9_epitope_Rep3 944.53648892004 944.5353899358599 90.097 2 -0.22173877028099528 0.05340275195239866 0.9438714419765777 ['ENSG00000198569|ENST00000673835|SLC34A3'] 110158 13017 TIDDLEDKLK True PC9_epitope_Rep3 1188.62378327096 1188.6221249037899 55.099 3 -0.2217675073698862 0.05340275195239866 0.9438714419765777 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF', 'nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154130117-154143232:-|nuORF', 'ENST00000600996.1_1_19:42012510-42012810:+|nuORF', 'ENST00000424846.3_1_19:53945677-53945857:+|nuORF'] 70611 20816 MAAAWPLLL True H1975_Epitope_Rep3 984.5466596809199 984.54556993586 86.958 2 -0.22180282814511892 0.053438946839962066 0.9438714419765777 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR'] 66797 6745 LSVLRPSQKT True PC9_epitope_Rep1 1127.66625721963 1127.6646149037902 30.75 3 -0.2220050102474617 0.05347414610564676 0.9438714419765777 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1', 'nc|ENSG00000138688|Q2LD37-5|BLTP1', 'ENST00000482114.1_1_4:123130334-123145991:+|nuORF'] 38625 16150 HHIYLEGTLL True PC9_epitope_Rep4 1194.6397081186199 1194.63805490379 70.06 3 -0.22202924946192795 0.05347414610564676 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.D273H|1|0.14|ENSG00000149925|chr16:30069529-30069529|G/C|missense_variant'] 39214 5965 HLHHGKVRRNF True PC9_epitope_Rep2 1399.7697682850696 1399.76812490379 28.332 3 -0.22206611185573374 0.053490750209166125 0.9438714419765777 ['ENST00000589825.5_1_17:42960950-42971889:-|nuORF'] 107504 6978 TAAPPAQPL True NCI_RA007_Epitope_Rep3 864.4705175352 864.46942993586 34.557 2 -0.22210467629754743 0.053490750209166125 0.9438714419765777 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 55453 9537 LATVTVRP True PC9_epitope_Rep2 855.5178020807899 855.51670993586 42.03 2 -0.22225263571684917 0.053564124493362585 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 15082 5993 EAAYQVRE True NCI_RA007_Epitope_Rep5 964.4614094034798 964.46030993586 29.736 2 -0.22235057504441816 0.05357972819721504 0.9438714419765777 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.G3456Afs*3|1|0.25|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant', 'FRAS1|p.G3729Afs*31|1|0.1|ENSG00000138759|chr4:78537086-78537086|G/-|frameshift_variant'] 100200 3519 SLLHLRYYNYR True NCI_RA007_Epitope_Rep2 1496.7888319638 1496.7871949037901 18.338 3 -0.22238049095660192 0.05357972819721504 0.9438714419765777 ['ENST00000457379.1_1_2:50815958-50816216:-|nuORF'] 43938 6533 ILEQDQQDKT True NCI_RA007_Epitope_Rep1 1216.5935457718397 1216.59244993586 29.426 2 -0.22248374221428005 0.05357972819721504 0.9438714419765777 ['ENSG00000173451|ENST00000308086|THAP2'] 88465 21088 QYVVDLTSF True PC9_epitope_Rep4 1070.5284263341398 1070.5278749679298 89.276 1 -0.2224940443204894 0.05359533016061868 0.9438714419765777 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 127560 12748 VQVQVGSL True PC9_epitope_Rep5 828.4705175351999 828.46942993586 54.042 2 -0.22251839455849184 0.05359533016061868 0.9438714419765777 ['CNTN3|p.D607Gfs*2|1|0.44|ENSG00000113805|chr3:74301772-74301773|-/C|frameshift_variant', 'ENSG00000113805|ENST00000263665|CNTN3'] 77813 17454 PAEPAFLA True PC9_epitope_Rep6 814.4225047136199 814.4219549679301 79.757 1 -0.22251876543400284 0.05359533016061868 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 30816 9372 GAPQVVAVTG True PC9_epitope_Rep4 897.4919812557698 897.4914349679301 43.658 1 -0.22257001443032512 0.05363051641447002 0.9438714419765777 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF'] 95520 14788 SAQFHYLI True PC9_epitope_Rep2 977.4970666362099 977.49596993586 62.145 2 -0.2225765357756919 0.05363051641447002 0.9438714419765777 ['ENSG00000277481|ENST00000620267|PKD1L3'] 101614 21863 SPFFPLVSA True PC9_epitope_Rep4 963.5065686907499 963.5060249679301 92.304 1 -0.22258911522991487 0.05364511691884457 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 6049 21170 APLVTLEVL True PC9_epitope_Rep6 953.57973363101 953.57862993586 94.276 2 -0.22259508653609542 0.05364511691884457 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 98543 23827 SILQTLILV True PC9_epitope_Rep5 998.6375828602999 998.63648993586 96.632 2 -0.22259855825981148 0.05364511691884457 0.9438714419765777 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 42280 15776 IEIPSVVSV True H1975_Epitope_Rep1 941.54334812229 941.54279496793 65.989 1 -0.22260828049879877 0.05364511691884457 0.9438714419765777 ['ZBTB20|p.T272Rfs*23|1|0.1|ENSG00000181722|chr3:114351265-114351266|-/TCGT|frameshift_variant', 'nc|ENSG00000181722|Q9HC78-2|ZBTB20', 'ZBTB20|p.A693Cfs*33|1|0.16|ENSG00000181722|chr3:114339155-114339156|-/G|frameshift_variant', 'ZBTB20|p.P692Lfs*43|1|0.38|ENSG00000181722|chr3:114339156-114339156|G/-|frameshift_variant', 'ENSG00000181722|ENST00000675478|ZBTB20'] 66689 9519 LSTELYYCK True NCI_RA007_Epitope_Rep1 1118.5317974624202 1118.5307099358602 41.022 2 -0.22266253769329122 0.053662707485269245 0.9438714419765777 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant'] 99210 5119 SLAVQGGK True NCI_RA007_Epitope_Rep3 758.4286527232199 758.42754993586 27.128 2 -0.2226920413764586 0.05367830192186164 0.9438714419765777 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A'] 12244 8818 DIREKHRLWHA True PC9_epitope_Rep3 1459.77966426243 1459.77802490379 38.868 3 -0.22270031834430065 0.05367830192186164 0.9438714419765777 ['ENSG00000168348|ENST00000307169|INSM2'] 15535 5082 EASENVKEKK True H1975_Epitope_Rep1 1160.60371653272 1160.60260993586 24.62 2 -0.22272588087570216 0.05367830192186164 0.9438714419765777 ['nc|ENSG00000136449|Q8TBZ2|MYCBPAP', 'ENSG00000136449|ENST00000323776|MYCBPAP', 'ENST00000470609.5_1_17:48585906-48599496:+|nuORF'] 124372 11180 VLDVVERSL True NCI_RA007_Epitope_Rep2 1028.5866099165999 1028.58550993586 48.069 2 -0.2227871305062689 0.05369589056372321 0.9438714419765777 ['ENST00000371206.6_1_10:97583001-97605437:+|nuORF', 'nc|ENSG00000138185|P49961-3|ENTPD1', 'nc|ENSG00000138185|P49961-4|ENTPD1', 'nc|ENSG00000138185|P49961-5|ENTPD1', 'ENSG00000138185|ENST00000371205|ENTPD1', 'nc|ENSG00000138185|P49961-2|ENTPD1', 'nc|ENSG00000138185|P49961-6|ENTPD1', 'ENST00000490659.5_1_10:97583001-97604470:+|nuORF'] 86098 13975 QPQLPYSQA True PC9_epitope_Rep5 1030.5083595959 1030.5072699358602 58.776 2 -0.2228133455023539 0.053712480252764615 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 136225 17817 YGNSLISTV True PC9_epitope_Rep1 952.4865615221601 952.48546993586 73.328 2 -0.22282086558452033 0.053712480252764615 0.9438714419765777 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4', 'TULP4|p.D509N|1|0.32|ENSG00000130338|chr6:158489626-158489626|G/A|missense_variant'] 31203 22919 GDKGTKVYVF True PC9_epitope_Rep5 1112.5866099165999 1112.58550993586 93.149 2 -0.22287138402962223 0.05374865256662826 0.9438714419765777 ['ENST00000414963.2_1_2:198283579-198285169:-|nuORF'] 11098 5319 DEDKEKTFEEK True NCI_RA007_Epitope_Rep1 1396.6358045066397 1396.6347099358602 24.767 2 -0.2230426888944643 0.05380340847845076 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 44259 8627 ILTSIKKEY True H1975_Epitope_Rep1 1093.63831113629 1093.63720993586 38.11 2 -0.22305824958488352 0.05381699249238088 0.9438714419765777 ['ENSG00000162994|ENST00000401408|CLHC1'] 53132 13125 KSKRRSCS True NCI_RA007_Epitope_Rep5 950.50798275642 950.50688993586 57.162 2 -0.22309910819768405 0.05381699249238088 0.9438714419765777 ['nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 431 15801 AALPVNVKI True PC9_epitope_Rep4 923.5804023373499 923.57930993586 68.704 2 -0.22310629469417526 0.05381699249238088 0.9438714419765777 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 43626 10353 IIISPRNGVP True H1975_Epitope_Rep3 1064.63422881536 1064.63312993586 44.877 2 -0.22313891605739852 0.05381699249238088 0.9438714419765777 ['ENST00000392557.8_1_14:105713688-105714024:-|nuORF'] 100889 16391 SLSIDTFSY True PC9_epitope_Rep5 1031.48114178855 1031.48004993586 68.046 2 -0.22319319184102404 0.05381699249238088 0.9438714419765777 ['nc|ENSG00000108231|O95970-2|LGI1', 'ENSG00000108231|ENST00000371418|LGI1', 'nc|ENSG00000108231|O95970-3|LGI1'] 72987 10071 NCYKEINSQ True NCI_RA007_Epitope_Rep1 1097.4811588718899 1097.48006993586 43.183 2 -0.22330746775869542 0.05387073995614524 0.9438714419765777 ['ENSG00000139985|ENST00000603540|ADAM21', 'ENST00000529267.2_1_14:70712472-70713909:-|nuORF'] 66782 18894 LSVETLLDV True PC9_epitope_Rep3 987.5488274255499 987.54772993586 77.899 2 -0.2233179619933817 0.05387073995614524 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 101637 14748 SPFGTITSA True PC9_epitope_Rep6 879.43379767331 879.43324496793 68.676 1 -0.22335520860894878 0.053888321100065036 0.9438714419765777 ['nc|ENSG00000070756|P11940-2|PABPC1', 'ENSG00000070756|ENST00000318607|PABPC1', 'ENSG00000151846|ENST00000281589|PABPC3'] 130859 16346 VVGGIYGV True PC9_epitope_Rep4 762.42759009406 762.4270449679301 70.84 1 -0.22340341654505766 0.05390489993868108 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 32375 9297 GGETLDQVKMR True H1975_Epitope_Rep1 1232.6183210510399 1232.61722993586 40.669 2 -0.22342080161837993 0.05390489993868108 0.9438714419765777 ['ENSG00000078237|ENST00000179259|TIGAR'] 89512 11632 REQWWRWNRWP True NCI_RA007_Epitope_Rep2 1698.8280114371796 1698.8269099358602 49.839 2 -0.22346391990939607 0.05392147754510489 0.9438714419765777 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 53802 12767 KYFLWEEKF True NCI_RA007_Epitope_Rep3 1288.6492101731599 1288.64810993586 57.457 2 -0.22350222417339982 0.05392147754510489 0.9438714419765777 ['ENSG00000154016|ENST00000284154|GRAP'] 73917 17104 NHIEPLKIQL True PC9_epitope_Rep3 1203.6975573479099 1203.69592490379 70.941 3 -0.2235766713841259 0.053939056112969154 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 107030 18301 SYLPFTEAF True NCI_RA007_Epitope_Rep4 1073.5069626135698 1073.50637496793 79.169 1 -0.22368142133201607 0.0539937942438825 0.9438714419765777 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 32838 6149 GIGTVPVGR True H1975_Epitope_Rep3 854.4974009893798 854.49630993586 28.662 2 -0.22379956413938962 0.054029950577830624 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 101549 8787 SPASPLSSA True PC9_epitope_Rep4 815.4024975450301 815.40140993586 41.314 2 -0.2238475050184045 0.054042505759084494 0.9438714419765777 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 54903 20275 LAGPAELL True PC9_epitope_Rep5 782.4538048418999 782.4532549679301 83.039 1 -0.22387107886630006 0.054042505759084494 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 100141 22702 SLLDNMIGV True PC9_epitope_Rep2 960.4950180308799 960.49392993586 92.819 2 -0.22389487262441915 0.054042505759084494 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B', 'ENST00000471904.1_1_2:192128111-192215016:+|nuORF'] 136703 18680 YIHVHFLEV True PC9_epitope_Rep2 1155.60767971435 1155.60604490379 77.219 3 -0.22391103476745547 0.054042505759084494 0.9438714419765777 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 131838 3436 VYAQVAWYCNR True NCI_RA007_Epitope_Rep4 1371.6393908487896 1371.6377549037902 19.117 3 -0.2239138125372255 0.054042505759084494 0.9438714419765777 ['BEST4|p.R67W|2|0.68|ENSG00000142959|chr1:44787420-44787420|G/A|missense_variant'] 95611 10088 SATPPASLP True NCI_RA007_Epitope_Rep5 839.43888305375 839.43778993586 45.438 2 -0.22394691504083675 0.054042505759084494 0.9438714419765777 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF'] 61489 13863 LLFPERSQR True NCI_RA007_Epitope_Rep3 1144.63529144452 1144.6341899358601 61.857 2 -0.22397812049952148 0.0540600791394973 0.9438714419765777 ['ENST00000451429.6_1_1:26603851-26603926:+|nuORF'] 29788 11648 FVTEGSHFVEA True PC9_epitope_Rep6 1221.56660274801 1221.56550993586 55.929 2 -0.22399757838146117 0.054095223941594994 0.9438714419765777 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 111426 13231 TLKKAMLTFI True PC9_epitope_Rep2 1164.6940521906 1164.69241490379 56.171 3 -0.22403723016635055 0.054095223941594994 0.9438714419765777 ['ENST00000263708.6_1_2:120737192-120737405:+|nuORF'] 107104 14561 SYMGHFDLL True NCI_RA007_Epitope_Rep5 1081.49026700361 1081.4891699358602 62.681 2 -0.22407565916377015 0.05411179016588338 0.9438714419765777 ['ENSG00000169976|ENST00000367569|SF3B5'] 65641 7213 LSGRCEQR True NCI_RA007_Epitope_Rep1 947.4606982108298 947.45960993586 32.048 2 -0.22409144265962622 0.05411179016588338 0.9438714419765777 ['ENST00000409470.5_2_2:85843553-85850780:+|nuORF'] 113179 12693 TQDGTPITV True PC9_epitope_Rep2 930.4658260775799 930.46472993586 54.13 2 -0.22413359509071346 0.05412734972880601 0.9438714419765777 ['nc|ENSG00000166478|P52747-2|ZNF143', 'nc|ENSG00000166478|P52747-3|ZNF143', 'ENSG00000166478|ENST00000396602|ZNF143'] 121680 15923 VGLLERLPQR True PC9_epitope_Rep5 1179.7087907379498 1179.70714490379 66.239 3 -0.2241634090882379 0.05412734972880601 0.9438714419765777 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'ENST00000589085.5_1_19:5785216-5787684:-|nuORF'] 60714 20340 LIYRKLLP True PC9_epitope_Rep2 1014.6589870112199 1014.65788993586 83.66 2 -0.22420490865165946 0.05412734972880601 0.9438714419765777 ['chr8:40114873-40125442|125|21.34|0.21|6.66|+|0|TE_info:MLT2F,MLT2F_dup974,ERVL,LTR,acceptor,+,40125442,40125720|LINC02866,None|3'] 20446 5086 EPRKQAGSLA True NCI_RA007_Epitope_Rep3 1055.5723568347898 1055.5712499358601 26.998 2 -0.22422976844900672 0.054160475482912335 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF', 'ENST00000496181.1_1_6:167435938-167438429:+|nuORF', 'nc|ENSG00000272980|O95684-3|CEP43'] 41388 10582 IAPVLPHTA True PC9_epitope_Rep2 917.5334521449302 917.53234993586 46.021 2 -0.22427487760844544 0.054160475482912335 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 129469 10383 VTEPWFTQRYR True PC9_epitope_Rep5 1481.7415474182098 1481.7399149037901 44.922 3 -0.22427553277029955 0.054160475482912335 0.9438714419765777 ['ENSG00000183665|ENST00000328599|TRMT12', 'ENST00000521443.1_1_8:125463141-125474348:+|nuORF'] 81359 5014 PPRVAAVAA True PC9_epitope_Rep4 850.5024863698197 850.50138993586 25.91 2 -0.2242811110131716 0.054160475482912335 0.9438714419765777 ['ENST00000311234.8_1_13:52025275-52027034:-|nuORF'] 16076 4888 EEDEKWKMSP True H1975_Epitope_Rep2 1277.55980311541 1277.55814490379 23.886 3 -0.22432025455263913 0.054178042755520885 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 13022 21186 DLQQVFQIAY True H1975_Epitope_Rep1 1223.61863832087 1223.61754993586 88.011 2 -0.22449068201660216 0.0541956093755804 0.9438714419765777 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.V2037Lfs*29|1|0.2|ENSG00000196569|chr6:129440839-129440839|G/-|frameshift_variant', 'LAMA2|p.R1029Hfs*46|1|0.17|ENSG00000196569|chr6:129300784-129300784|G/-|frameshift_variant', 'LAMA2|p.V425Sfs*27|1|0.09|ENSG00000196569|chr6:129165640-129165640|A/-|frameshift_variant', 'LAMA2|p.E614Gfs*16|1|0.25|ENSG00000196569|chr6:129250170-129250171|AA/-|frameshift_variant'] 106447 7474 SVVCVCVKL True PC9_epitope_Rep2 948.5136453004799 948.51254993586 34.12 2 -0.22455175949997255 0.05421317534312724 0.9438714419765777 ['ENST00000483060.1_1_1:67091531-67109432:+|nuORF'] 24618 10886 FAPREFLR True NCI_RA007_Epitope_Rep4 1034.5661492555398 1034.56504993586 48.727 2 -0.22458198696301596 0.05423074065819776 0.9438714419765777 ['ENST00000358022.4_1_9:25677009-25677096:-|nuORF'] 44804 4153 IPVEQKEGA True PC9_epitope_Rep3 969.5131106231698 969.51200993586 21.093 2 -0.22459555534621672 0.05424729784942243 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 105382 18402 SVAAQLTGV True PC9_epitope_Rep3 844.4654321547599 844.46432993586 75.991 2 -0.22461195776552767 0.05424729784942243 0.9438714419765777 ['nc|ENSG00000247315|Q9NUD5-2|ZCCHC3', 'ENSG00000247315|ENST00000500893|ZCCHC3'] 37686 17250 HALLTLYIS True PC9_epitope_Rep6 1029.58588164061 1029.58478993586 78.951 2 -0.22471525426695751 0.05425982321919334 0.9438714419765777 ['nc|ENSG00000136883|Q96FN5|KIF12', 'ENSG00000136883|ENST00000640217|KIF12'] 107787 14164 TAMQILSGL True PC9_epitope_Rep4 932.5001034113199 932.49900993586 62.386 2 -0.22475250819631074 0.05425982321919334 0.9438714419765777 ['ENSG00000171798|ENST00000304613|KNDC1'] 3158 9293 AGEDCGEEVP True PC9_epitope_Rep2 1004.3756907438399 1004.37458993586 41.086 2 -0.2247953253727593 0.05425982321919334 0.9438714419765777 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.R2720Qfs*63|1|0.51|ENSG00000168477|chr6:32061470-32061471|GC/-|frameshift_variant', 'TNXB|p.P3212Lfs*4|1|0.45|ENSG00000168477|chr6:32052891-32052891|G/-|frameshift_variant', 'TNXB|p.T3316Qfs*58|1|0.15|ENSG00000168477|chr6:32050233-32050233|C/-|frameshift_variant', 'TNXB|p.G3470Afs*51|1|0.22|ENSG00000168477|chr6:32049359-32049359|C/-|frameshift_variant', 'TNXB|p.A1701Pfs*4|1|0.19|ENSG00000168477|chr6:32079049-32079049|G/-|frameshift_variant'] 127206 13212 VQHRRQEELEP True NCI_RA007_Epitope_Rep2 1419.7218746027897 1419.72076993586 56.025 2 -0.2247970448851038 0.05425982321919334 0.9438714419765777 ['ENST00000290902.9_1_4:1166395-1166464:-|nuORF'] 56678 7292 LEACRKMG True H1975_Epitope_Rep2 906.4415429893799 906.44044993586 32.988 2 -0.22479752278651363 0.05425982321919334 0.9438714419765777 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485071.2_1_7:100173012-100174533:-|nuORF'] 34537 4940 GQENLKTDL True PC9_epitope_Rep4 1016.51383889916 1016.51274993586 25.605 2 -0.22482156456238409 0.05425982321919334 0.9438714419765777 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4'] 29936 9496 FWQFQRRVKH True NCI_RA007_Epitope_Rep4 1430.76837130274 1430.7667349037902 43.377 3 -0.22486175154071517 0.05429494559364207 0.9438714419765777 ['ENSG00000187980|ENST00000679259|PLA2G2C'] 57129 15486 LEEPPLVLAA True H1975_Epitope_Rep1 1050.5961119711399 1050.59557496793 64.839 1 -0.22487932174041214 0.05429494559364207 0.9438714419765777 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9', 'ENST00000464863.1_1_6:32825734-32826344:+|nuORF', 'ENST00000467593.1_1_6:32823908-32826344:+|nuORF'] 61991 16937 LLLQKEPL True PC9_epitope_Rep1 952.5957180483199 952.59462993586 69.971 2 -0.22497027614460513 0.054349642558722495 0.9438714419765777 ['JAKMIP1|p.A242P|2|0.07|ENSG00000152969|chr4:6085530-6085530|C/G|missense_variant'] 11706 5454 DHFASVHSV True PC9_epitope_Rep6 997.46174375665 997.46064993586 28.907 2 -0.22500424368565203 0.054365182516989116 0.9438714419765777 ['ENST00000489675.1_1_1:54387326-54394129:-|nuORF', 'ENSG00000081870|ENST00000194214|IFT25'] 102041 6395 SPPPPPPPP True NCI_RA007_Epitope_Rep4 881.4647038787699 881.46360993586 31.2 2 -0.22501528221222927 0.054365182516989116 0.9438714419765777 ['RBL2-TBC1D19|1|fusion', 'ENSG00000099999|ENST00000382363|RNF215', 'ENST00000307403.6_1_7:155500050-155531112:+|nuORF', 'ENSG00000260428|ENST00000567180|SCX', 'ENST00000471339.1_1_5:173036657-173043649:-|nuORF', 'ENST00000587013.5_1_19:38882703-38882923:+|nuORF', 'nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENSG00000107816|ENST00000454422|LZTS2', 'ENSG00000274209|ENST00000620264|ANTXRL', 'ENSG00000103479|ENST00000262133|RBL2', 'ENSG00000126461|ENST00000360565|SCAF1', 'ENSG00000127666|ENST00000248244|TICAM1', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1', 'ENSG00000139800|ENST00000267294|ZIC5', 'ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENSG00000100312|ENST00000216139|ACR'] 98542 13387 SILQCLCNAP True PC9_epitope_Rep5 1060.50453716876 1060.5034299358601 56.509 2 -0.2251084695046412 0.054365182516989116 0.9438714419765777 ['ENSG00000138592|ENST00000307179|USP8', 'nc|ENSG00000138592|P40818-2|USP8'] 19032 11390 ELGLPPPPP True H1975_Epitope_Rep2 915.50656869075 915.50546993586 48.861 2 -0.22512181000234271 0.054381730412179724 0.9438714419765777 ['ENSG00000108798|ENST00000225941|ABI3', 'nc|ENSG00000108798|Q9P2A4-2|ABI3'] 100545 8920 SLPTSQSYCPP True H1975_Epitope_Rep2 1178.52777471114 1178.5266699358601 39.272 2 -0.22515344191666758 0.054381730412179724 0.9438714419765777 ['nc|ENSG00000135903|P23760|PAX3', 'nc|ENSG00000135903|P23760-6|PAX3', 'ENSG00000135903|ENST00000392070|PAX3', 'nc|ENSG00000135903|P23760-8|PAX3'] 63843 8608 LPTLSDSDP True H1975_Epitope_Rep2 943.44984166027 943.44874993586 38.067 2 -0.22516767847355026 0.05439928705371233 0.9438714419765777 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 59589 4136 LGSALRPSTSR True NCI_RA007_Epitope_Rep1 1143.6360197205101 1143.6343649037901 20.167 3 -0.22519389868242454 0.05441684304333296 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 20479 4754 EPSSCICTTCK True H1975_Epitope_Rep3 1170.47191671114 1170.4708099358602 23.412 2 -0.22528324239032282 0.0544313667248357 0.9438714419765777 ['BCL11B|p.Y221C|1|0.28|ENSG00000127152|chr14:99176174-99176174|T/C|missense_variant'] 56669 9380 LEAALGLERAH True NCI_RA007_Epitope_Rep2 1178.6407707477802 1178.6396699358602 41.095 2 -0.22529440892459485 0.0544313667248357 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 77385 13553 NYLSIFRKF True NCI_RA007_Epitope_Rep4 1186.6498788795 1186.6482449037899 59.337 3 -0.22530227345939433 0.0544313667248357 0.9438714419765777 ['ENSG00000014216|ENST00000279247|CAPN1', 'ENST00000528165.5_1_11:64977175-64978433:+|nuORF', 'POLA2-CAPN1|1|fusion'] 111266 17280 TLGSHLMSLL True PC9_epitope_Rep4 1070.5794163611802 1070.57830993586 74.472 2 -0.22534153663763193 0.0544313667248357 0.9438714419765777 ['RYR1|p.R2062H|1|0.17|ENSG00000196218|chr19:38492547-38492547|G/A|missense_variant'] 131599 7838 VVWQRRHAR True PC9_epitope_Rep6 1206.68464167878 1206.6829949037901 39.544 3 -0.22539604774340055 0.05448604897246923 0.9438714419765777 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 30945 6360 GASNLKEHNFP True NCI_RA007_Epitope_Rep1 1212.58873517492 1212.5876299358601 28.765 2 -0.22542452196438895 0.054539716720191575 0.9438714419765777 ['ENST00000344120.4_1_5:141692654-141692750:-|nuORF'] 1675 17639 AEGLTLAQV True PC9_epitope_Rep1 900.4916469025999 900.49054993586 72.642 2 -0.22543448783864092 0.054539716720191575 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 100541 17711 SLPTAPLAP True PC9_epitope_Rep5 865.49091862661 865.48982993586 73.142 2 -0.22547981863526836 0.05455422939134631 0.9438714419765777 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 53811 16399 KYFLWVVKF True NCI_RA007_Epitope_Rep2 1228.7008518231999 1228.6997499358602 68.516 2 -0.22549207344821143 0.05455422939134631 0.9438714419765777 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF', 'nc|ENSG00000177885|P62993-2|GRB2', 'ENSG00000177885|ENST00000316804|GRB2'] 67076 8547 LTCLSKTP True PC9_epitope_Rep1 861.46298962661 861.46188993586 37.713 2 -0.2255172969066756 0.05455422939134631 0.9438714419765777 ['ENST00000587230.5_1_19:13260959-13261007:-|nuORF'] 20377 10143 EPISIYFSQ True H1975_Epitope_Rep3 1082.52842633414 1082.52732993586 44.059 2 -0.22551902110473307 0.05455422939134631 0.9438714419765777 ['ENSG00000101842|ENST00000217957|VSIG1'] 33583 11701 GLLADAAGL True H1975_Epitope_Rep2 799.44396843419 799.44341496793 50.082 1 -0.2255571436169764 0.05457177859449827 0.9438714419765777 ['ENST00000576921.1_1_16:3073505-3073679:-|nuORF'] 32855 9784 GIIEDWILWK True H1975_Epitope_Rep1 1271.69140933831 1271.6903099358601 42.564 2 -0.2256949020583964 0.05458831390600639 0.9438714419765777 ['ACTR3B|p.D87Ifs*25|1|0.24|ENSG00000133627|chr7:152801652-152801652|G/-|frameshift_variant'] 68906 11815 LVESGWGSLLP True NCI_RA007_Epitope_Rep1 1156.6128246644398 1156.61172993586 49.937 2 -0.22569881612030468 0.05458831390600639 0.9438714419765777 ['ENST00000588984.5_1_19:3751026-3754498:-|nuORF', 'ENSG00000011132|ENST00000316757|APBA3'] 101626 14751 SPFGSITSA True PC9_epitope_Rep6 865.4181476091701 865.41704993586 68.689 2 -0.22571650873711682 0.054605861499341095 0.9438714419765777 ['PABPC4|p.Q565Pfs*37|1|0.11|ENSG00000090621|chr1:39562343-39562344|-/G|frameshift_variant', 'nc|ENSG00000090621|Q13310-2|PABPC4', 'nc|ENSG00000090621|Q13310|PABPC4', 'ENSG00000090621|ENST00000372858|PABPC4'] 99622 12630 SLFRSNLVP True PC9_epitope_Rep4 1031.5763795860698 1031.5752899358602 56.421 2 -0.2257535827410162 0.05462239462499304 0.9438714419765777 ['ENST00000590891.1_1_16:4659124-4659325:-|nuORF'] 9291 6549 AVRVPRRRQQR True H1975_Epitope_Rep1 1420.8599802717997 1420.8583349037901 30.248 3 -0.2257912104130124 0.05462239462499304 0.9438714419765777 ['ENSG00000182752|ENST00000328252|PAPPA', 'PAPPA|p.Y946Tfs*18|1|0.21|ENSG00000182752|chr9:116265957-116265957|G/-|frameshift_variant'] 25214 5586 FEAEVARA True H1975_Epitope_Rep3 891.4450310633498 891.44392993586 26.526 2 -0.22580125936494827 0.054635884492613765 0.9438714419765777 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1'] 39348 5441 HLTGEFEK True PC9_epitope_Rep3 959.47124581119 959.47014993586 26.002 2 -0.22582604636716652 0.054635884492613765 0.9438714419765777 ['ENSG00000132341|ENST00000543796|RAN', 'ENST00000541630.5_1_12:131357386-131357560:+|nuORF', 'ENST00000464211.6_1_12:131357386-131359105:+|nuORF', 'ENST00000537745.5_1_12:131357386-131357560:+|nuORF'] 100283 14969 SLLSNWDY True H1975_Epitope_Rep2 996.4552613938799 996.45416993586 62.73 2 -0.2258460082306332 0.054635884492613765 0.9438714419765777 ['ENST00000548257.1_1_12:48745482-48835873:+|nuORF', 'ENST00000524168.1_1_8:23225784-23261561:-|nuORF'] 136246 10034 YGRADIAV True PC9_epitope_Rep2 863.4501164437899 863.44900993586 43.921 2 -0.22584749414038016 0.054635884492613765 0.9438714419765777 ['nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3'] 89544 3852 RERRDNYVP True NCI_RA007_Epitope_Rep2 1203.6108676018298 1203.60922490379 19.618 3 -0.22586451105934774 0.054635884492613765 0.9438714419765777 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 132215 9215 VYKKYPNVF True PC9_epitope_Rep4 1156.6280808057597 1156.62643490379 43.044 3 -0.22605740431759805 0.05466995750366508 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 18898 10404 ELENLQKLNVS True NCI_RA007_Epitope_Rep1 1285.68778050985 1285.6866899358602 44.453 2 -0.22607377309829116 0.05466995750366508 0.9438714419765777 ['LRRC40|p.L310Gfs*8|1|0.16|ENSG00000066557|chr1:70175854-70175860|TAGTAGT/-|frameshift_variant', 'ENSG00000066557|ENST00000370952|LRRC40'] 126865 18697 VPTLVTPSA True PC9_epitope_Rep4 883.50148331031 883.50038993586 79.998 2 -0.22627997875825637 0.05466995750366508 0.9438714419765777 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 78489 7245 PDERIKMER True NCI_RA007_Epitope_Rep1 1172.59719168364 1172.5960899358602 32.173 2 -0.22636800063944043 0.054686485182504775 0.9438714419765777 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 40466 8661 HSDQQVFEY True H1975_Epitope_Rep2 1151.4883524273098 1151.48724993586 38.273 2 -0.2264243422724029 0.054686485182504775 0.9438714419765777 ['nc|ENSG00000141076|Q969X6-2|UTP4', 'nc|ENSG00000141076|Q969X6-3|UTP4', 'ENSG00000141076|ENST00000314423|UTP4', 'SNTB2-CIRH1A|1|fusion'] 112421 12630 TNKCGLGLDL True PC9_epitope_Rep4 1032.5273807883198 1032.5262899358602 56.421 2 -0.22650532968568424 0.054741139357951385 0.9438714419765777 ['ENSG00000173894|ENST00000310942|CBX2'] 77594 13474 NYTDIKDYL True NCI_RA007_Epitope_Rep5 1143.54480467427 1143.54370993586 58.512 2 -0.22652279163434522 0.054758679556883336 0.9438714419765777 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 74318 13217 NILMCFWYL True NCI_RA007_Epitope_Rep3 1201.56640914933 1201.5653099358601 59.259 2 -0.2266543896279765 0.054774186365829224 0.9438714419765777 ['ENSG00000162972|ENST00000392290|MAIP1'] 91841 7391 RPNDSRMLVA True PC9_epitope_Rep1 1157.59752603681 1157.59588490379 33.243 3 -0.22669615294449452 0.054774186365829224 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 10062 13770 AYVHMVTHF True PC9_epitope_Rep1 1103.52223583823 1103.52167496793 57.812 1 -0.22672190032858933 0.054774186365829224 0.9438714419765777 ['ENSG00000139644|ENST00000267115|TMBIM6', 'nc|ENSG00000139644|P55061-2|TMBIM6'] 60716 19630 LIYRKLLP True PC9_epitope_Rep4 1014.6589870112199 1014.65788993586 83.623 2 -0.22678316489931016 0.054791724649781985 0.9438714419765777 ['chr8:40114873-40125442|125|21.34|0.21|6.66|+|0|TE_info:MLT2F,MLT2F_dup974,ERVL,LTR,acceptor,+,40125442,40125720|LINC02866,None|3'] 54901 20081 LAGPAELL True PC9_epitope_Rep2 782.4538048418999 782.4532549679301 82.649 1 -0.22687176628960654 0.05482679926526523 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 31314 7169 GEAAVAFKP True H1975_Epitope_Rep2 888.4705175352 888.46942993586 32.509 2 -0.2268829931327466 0.05482679926526523 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 49319 8453 KIAELQTEFQK True NCI_RA007_Epitope_Rep2 1333.7241660185698 1333.7230699358602 37.522 2 -0.22689771957213484 0.05484433559686816 0.9438714419765777 ['ENSG00000196275|ENST00000451013|GTF2IRD2', 'nc|ENSG00000196275|Q86UP8-6|GTF2IRD2'] 59490 16751 LGPGLELAP True PC9_epitope_Rep4 865.4909186266099 865.48982993586 72.4 2 -0.22695516865356258 0.05486187127776025 0.9438714419765777 ['nc|ENSG00000185090|Q5VSG8-3|MANEAL', 'ENSG00000185090|ENST00000373045|MANEAL'] 126936 10628 VPVHDIYVSQ True PC9_epitope_Rep4 1155.59242357303 1155.5913299358601 48.631 2 -0.22704569775899147 0.0548783881560639 0.9438714419765777 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 56173 10202 LDNQIKKDLA True NCI_RA007_Epitope_Rep1 1156.64518742188 1156.6440899358602 43.695 2 -0.22706965981542843 0.0548783881560639 0.9438714419765777 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 31619 7247 GEGPAALGA True H1975_Epitope_Rep2 741.36571811349 741.36516496793 32.81 1 -0.2271690627468433 0.05491447441653371 0.9438714419765777 ['ENSG00000185085|ENST00000330574|INTS5'] 114017 14721 TRMPDGPVAL True PC9_epitope_Rep1 1055.54336520563 1055.54277496793 61.446 1 -0.2272353645469989 0.054930988423864645 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 64020 20060 LQDAFHISL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 82.567 2 -0.22724374475824466 0.054930988423864645 0.9438714419765777 ['ENST00000571053.1_1_17:54962003-54962030:-|nuORF', 'ENST00000449319.2_1_11:65340387-65341109:+|nuORF', 'nc|ENSG00000176973|Q8N5H3-2|FAM89B', 'nc|ENSG00000176973|Q8N5H3-1|FAM89B', 'ENSG00000176973|ENST00000530349|FAM89B'] 15120 8275 EAEDDWEDP True NCI_RA007_Epitope_Rep1 1104.38836360252 1104.38726993586 36.188 2 -0.22725958414811992 0.05494852054540395 0.9438714419765777 ['SH3TC1|p.G743Afs*3|1|0.16|ENSG00000125089|chr4:8227919-8227919|C/-|frameshift_variant', 'ENST00000515682.5_1_4:8207046-8242679:+|nuORF', 'ENSG00000125089|ENST00000245105|SH3TC1', 'ENST00000506360.5_1_4:8220037-8234255:+|nuORF', 'ENST00000502669.5_1_4:8220037-8239209:+|nuORF'] 79862 11335 PIILKRKRGRP True H1975_Epitope_Rep3 1332.88300713216 1332.88135490379 48.709 3 -0.2272899618148768 0.05496503237056412 0.9438714419765777 ['ENSG00000126705|ENST00000673934|AHDC1'] 123500 8209 VIGSGC[Carbamidomethyl]NL True NCI_RA007_Epitope_Rep2 818.3956386222101 818.3950849679301 36.568 1 -0.22729449486723313 0.05496503237056412 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-5|LDHA', 'nc|ENSG00000134333|P00338-2|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENSG00000166796|ENST00000541669|LDHC', 'ENSG00000166800|ENST00000280706|LDHAL6A', 'ENSG00000111716|ENST00000350669|LDHB'] 124212 18282 VLAPSLVVA True PC9_epitope_Rep6 867.5429541994699 867.54184993586 82.965 2 -0.22730195444836926 0.054979503255365325 0.9438714419765777 ['ENSG00000213901|ENST00000409878|SLC23A3', 'nc|ENSG00000213901|Q6PIS1-5|SLC23A3', 'ENST00000497918.5_1_2:220033318-220033813:-|nuORF', 'nc|ENSG00000213901|Q6PIS1-2|SLC23A3'] 123653 23358 VILQLQFLF True PC9_epitope_Rep3 1119.6692173417498 1119.6681299358602 95.125 2 -0.22736589339138571 0.054979503255365325 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 84183 6325 QESPGGLEA True H1975_Epitope_Rep2 886.4032258210199 886.40212993586 29.262 2 -0.22736711380024432 0.054979503255365325 0.9438714419765777 ['ARAP2-PDS5A|1|fusion', 'chr4:39825488-39837932|160|15.06|0.92|4.04|-|2|PDS5A,None|1', 'ENSG00000121892|ENST00000303538|PDS5A'] 19002 15268 ELGFHEGDVI True PC9_epitope_Rep2 1114.5294889632999 1114.52838993586 64.005 2 -0.22739313529147123 0.054979503255365325 0.9438714419765777 ['NAGLU-SH3GL1|1|fusion', 'nc|ENSG00000141985|Q99961-3|SH3GL1', 'nc|ENSG00000141985|Q99961-2|SH3GL1', 'ENSG00000141985|ENST00000269886|SH3GL1'] 95128 6519 RYVRSWMEP True PC9_epitope_Rep2 1222.5917123803797 1222.59007490379 30.491 3 -0.2274259201472438 0.054997032200623235 0.9438714419765777 ['ENSG00000128709|ENST00000249499|HOXD9'] 67632 5172 LTEYQKKCDEL True NCI_RA007_Epitope_Rep2 1368.6595171566798 1368.6584099358602 24.738 2 -0.2274733252879765 0.055014560495613304 0.9438714419765777 ['ENSG00000164151|ENST00000296564|ICE1', 'ICE1|p.F326Lfs*82|1|0.19|ENSG00000164151|chr5:5457612-5457612|T/-|frameshift_variant'] 75867 14912 NRDNVGLVL True PC9_epitope_Rep3 998.5508931142199 998.5503449679301 62.495 1 -0.22752672785157774 0.05505063619839003 0.9438714419765777 ['ENSG00000013523|ENST00000251089|ANGEL1'] 15921 11912 EDRSFRTTRNR True NCI_RA007_Epitope_Rep2 1436.7232715851198 1436.72161490379 50.938 3 -0.22760448005490805 0.05506816284892887 0.9438714419765777 ['ENST00000362000.9_1_7:65540928-65547388:+|nuORF'] 92060 7781 RPRVTEPISA True PC9_epitope_Rep3 1124.6302060640799 1124.62855490379 34.924 3 -0.22773638838261545 0.055084667173618714 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 107608 6676 TAGPAVHL True H1975_Epitope_Rep2 764.41808803952 764.41698993586 30.588 2 -0.22774300248594948 0.055084667173618714 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 30041 18267 FYISPVNKL True PC9_epitope_Rep5 1079.60153170475 1079.6004299358601 75.278 2 -0.2277771623647999 0.055120738899810826 0.9438714419765777 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 78576 10037 PDRAYDAV True PC9_epitope_Rep4 905.4242956187699 905.42318993586 46.271 2 -0.22779416848524833 0.0551331503597656 0.9438714419765777 ['ENSG00000128266|ENST00000615612|GNAZ'] 100294 7253 SLLTSTVP True H1975_Epitope_Rep3 816.45928414516 816.45818993586 32.871 2 -0.22786217503793707 0.0551331503597656 0.9438714419765777 ['ENST00000252445.7_1_19:11663878-11664130:-|nuORF'] 77764 7033 PAASVPTPEVP True NCI_RA007_Epitope_Rep2 1063.55497543515 1063.5538699358601 31.979 2 -0.22787933759926138 0.0551331503597656 0.9438714419765777 ['nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|O94854-4|MACF1'] 95479 20312 SAMEVVPAL True PC9_epitope_Rep2 915.4735543103099 915.47244993586 83.553 2 -0.2278805119619955 0.0551331503597656 0.9438714419765777 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 136218 4877 YGMRLGREVR True NCI_RA007_Epitope_Rep5 1235.6557096192698 1235.65405490379 25.453 3 -0.22790596985589237 0.0551331503597656 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 96370 11150 SEGLAQLTS True PC9_epitope_Rep5 904.45017601344 904.44962496793 47.873 1 -0.22790934683466282 0.0551331503597656 0.9438714419765777 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 33917 22155 GMEAALLNV True PC9_epitope_Rep2 916.46880328304 916.46770993586 90.705 2 -0.22797532611820745 0.055146581616569934 0.9438714419765777 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000598424.5_1_19:17597384-17597952:+|nuORF'] 931 14714 ADSEALFGVP True NCI_RA007_Epitope_Rep5 1004.4814761417199 1004.48097496793 63.27 1 -0.2279933811747727 0.055146581616569934 0.9438714419765777 ['ENSG00000173214|ENST00000671876|MFSD4B'] 21955 15213 ESLGTLYLL True NCI_RA007_Epitope_Rep3 1007.55391280599 1007.55280993586 67.361 2 -0.22800075650752796 0.055146581616569934 0.9438714419765777 ['ENST00000541346.1_1_12:6859683-6861527:-|nuORF', 'ENST00000564181.1_1_12:6859683-6859983:-|nuORF'] 119827 8039 VEVPAPAA True H1975_Epitope_Rep2 752.4068546494799 752.40574993586 35.872 2 -0.228027644565497 0.055146581616569934 0.9438714419765777 ['ENST00000462672.1_1_10:131506162-131515894:+|nuORF', 'ENSG00000170430|ENST00000651593|MGMT'] 5079 13701 ALLPLPPAA True H1975_Epitope_Rep1 861.53238951577 861.53184496793 57.837 1 -0.2280367380846506 0.055146581616569934 0.9438714419765777 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF'] 2717 18895 AETLVLETP True PC9_epitope_Rep3 971.51752729727 971.51642993586 77.903 2 -0.22818617374598862 0.055196069342727354 0.9438714419765777 ['nc|ENSG00000182871|P39060-1|COL18A1', 'nc|ENSG00000182871|P39060|COL18A1'] 60198 18116 LIALLEVLSQK True NCI_RA007_Epitope_Rep1 1225.76457427857 1225.76346993586 74.609 2 -0.22820081086483085 0.055196069342727354 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant', 'nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 3563 22380 AGNQQNQALL True PC9_epitope_Rep4 1055.53597132607 1055.5348699358601 94.319 2 -0.22821990564282169 0.055196069342727354 0.9438714419765777 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1'] 57952 9466 LEQPFQIP True H1975_Epitope_Rep2 970.5123823471799 970.51128993586 41.379 2 -0.22825998383127621 0.055196069342727354 0.9438714419765777 ['CUBN|p.F2134L|1|0.28|ENSG00000107611|chr10:16925644-16925644|A/C|missense_variant'] 30085 14311 FYNPAVSRI True PC9_epitope_Rep2 1065.56072952193 1065.5596299358601 60.312 2 -0.2282816634471835 0.055196069342727354 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 118534 3570 VDVDGNPHPTK True NCI_RA007_Epitope_Rep2 1177.57275075761 1177.57111490379 18.537 3 -0.22832788204406929 0.055196069342727354 0.9438714419765777 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3'] 120060 23626 VFFLIVVICK True H1975_Epitope_Rep1 1179.70897397875 1179.70732490379 98.114 3 -0.2283731065899136 0.05521358647285672 0.9438714419765777 ['ENSG00000134294|ENST00000256689|SLC38A2', 'nc|ENSG00000134294|Q96QD8-2|SLC38A2'] 48546 4494 KEGKPPISV True H1975_Epitope_Rep1 953.5545815123298 953.55348993586 22.31 2 -0.22845466874721146 0.05522803114571746 0.9438714419765777 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 27001 20801 FLLFPDMEA True NCI_RA007_Epitope_Rep5 1081.5154191222898 1081.5143299358601 86.991 2 -0.2285033696647271 0.05522803114571746 0.9438714419765777 ['nc|ENSG00000173369|P02746|C1QB', 'ENSG00000173369|ENST00000509305|C1QB'] 18423 9430 EKEVNQLREK True NCI_RA007_Epitope_Rep2 1271.6833638357496 1271.6822699358602 41.29 2 -0.2285499862326286 0.05522803114571746 0.9438714419765777 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 74967 11988 NLVMTPQG True PC9_epitope_Rep5 858.4269384710599 858.4263849679301 51.108 1 -0.22855825115158496 0.05522803114571746 0.9438714419765777 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 15616 9026 EAVQEITEY True H1975_Epitope_Rep2 1080.49752012868 1080.49642993586 39.67 2 -0.22861695884513367 0.055264084833429115 0.9438714419765777 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 129620 15475 VTGYFTVTL True PC9_epitope_Rep5 999.5276980581499 999.52660993586 64.535 2 -0.2287151251943587 0.05533721404471469 0.9438714419765777 ['nc|ENSG00000170848|Q00889|PSG6', 'ENSG00000170848|ENST00000187910|PSG6', 'ENST00000402456.4_1_19:43414555-43422019:-|nuORF'] 85731 7726 QLTAQLAD True PC9_epitope_Rep5 858.4446967101799 858.44358993586 34.659 2 -0.22874724240487004 0.05535164794424054 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion', 'VCL|p.A560S|1|0.29|ENSG00000035403|chr10:74095790-74095790|G/T|missense_variant'] 106530 12536 SVVSGAVVAA True PC9_epitope_Rep2 858.4810822188999 858.47998993586 53.526 2 -0.22875423564417577 0.05535164794424054 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E'] 40787 4544 HVGKTPIVGQP True H1975_Epitope_Rep3 1131.6400424717897 1131.63838490379 22.598 3 -0.22877351315064168 0.05535164794424054 0.9438714419765777 ['CON__P12763'] 90793 4910 RKRTIVEEL True NCI_RA007_Epitope_Rep3 1142.6771562564998 1142.67550490379 26.303 3 -0.22878550498703687 0.05535164794424054 0.9438714419765777 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 131597 9757 VVWQRRHAR True PC9_epitope_Rep5 1206.68464167878 1206.6829949037901 42.5 3 -0.22886476067113126 0.05538256227758007 0.9438714419765777 ['ENST00000521653.5_1_8:58120588-58120636:+|nuORF'] 108657 13004 TELEDSVQQMY True H1975_Epitope_Rep2 1341.57584710237 1341.5747499358602 55.137 2 -0.2288759386171738 0.05538256227758007 0.9438714419765777 ['ENSG00000140743|ENST00000268383|CDR2'] 119297 22563 VELLLCLPV True PC9_epitope_Rep1 997.5881901397299 997.58708993586 91.594 2 -0.2288951807691804 0.05538256227758007 0.9438714419765777 ['ENSG00000188994|ENST00000369577|ZNF292', 'ZNF292|p.S1288Pfs*23|1|0.24|ENSG00000188994|chr6:87257486-87257486|T/-|frameshift_variant'] 98872 18014 SIVPKLQAI True PC9_epitope_Rep5 967.6066170851899 967.60552993586 74.307 2 -0.22891656120132925 0.05538256227758007 0.9438714419765777 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A'] 55479 13291 LAVHPSGVAL True PC9_epitope_Rep2 962.5549158654999 962.55380993586 56.402 2 -0.22891817404735806 0.05538256227758007 0.9438714419765777 ['ENSG00000187608|ENST00000649529|ISG15'] 96471 10893 SEIVDFSVP True H1975_Epitope_Rep2 991.4862271689899 991.48512993586 46.929 2 -0.22893528431151058 0.05538256227758007 0.9438714419765777 ['ENSG00000105464|ENST00000263269|GRIN2D', 'ENST00000584176.1_1_17:72843434-72846906:-|nuORF', 'ENSG00000161509|ENST00000293190|GRIN2C'] 33259 16032 GLALPHDLAVQ True PC9_epitope_Rep3 1132.62405805448 1132.62296993586 66.817 2 -0.22905490949655127 0.05543713973273034 0.9438714419765777 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1', 'ENST00000487671.1_1_22:31840579-31845472:-|nuORF', 'nc|ENSG00000184708|Q9NRA8-2|EIF4ENIF1'] 95139 16446 RYYYKREILER True PC9_epitope_Rep3 1587.8521604963496 1587.85051490379 68.396 3 -0.22908210093446985 0.055454646550765464 0.9438714419765777 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000475698.1_1_1:201982922-201984448:+|nuORF', 'nc|ENSG00000135373|Q9NZC4-2|EHF', 'ENSG00000135373|ENST00000257831|EHF', 'nc|ENSG00000135373|Q9NZC4-3|EHF'] 81462 14500 PQLFQSTI True NCI_RA007_Epitope_Rep3 932.4967322830399 932.49562993586 64.342 2 -0.22911164987917784 0.055470096558370555 0.9438714419765777 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 60857 19302 LKLVQLFV True PC9_epitope_Rep6 958.6215388733399 958.62044993586 86.892 2 -0.22918357093026342 0.055470096558370555 0.9438714419765777 ['ENSG00000187741|ENST00000389301|FANCA', 'nc|ENSG00000187741|O15360-3|FANCA', 'ENST00000562424.1_1_16:89805011-89806109:-|nuORF'] 46917 24588 IVKTKKRWRKT True H1975_Epitope_Rep1 1442.9197865636997 1442.9186899358601 101.89 2 -0.22918807546032552 0.055470096558370555 0.9438714419765777 ['HAL1M8_dup1066|chr8:143743399-143743515:-|1.8390974932074844|0.3402307778492503|2.43|501.0|4|3|sense'] 22002 9483 ESPEVTQNP True H1975_Epitope_Rep3 999.45090428943 999.44980993586 41.481 2 -0.22935870690770796 0.055500991420047066 0.9438714419765777 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 4825 5423 ALERNSWLQKR True NCI_RA007_Epitope_Rep1 1399.76843087239 1399.76677490379 25.167 3 -0.22938227111085424 0.055500991420047066 0.9438714419765777 ['ENST00000586864.1_1_19:56160799-56160967:+|nuORF', 'ENSG00000173581|ENST00000586790|CCDC106'] 27293 18879 FLYPNVSLL True H1975_Epitope_Rep1 1064.59063266788 1064.59007496793 78.722 1 -0.22939683245516498 0.055500991420047066 0.9438714419765777 ['ENST00000394434.6_1_5:145551543-145552296:-|nuORF'] 129862 20103 VTLNPAENI True PC9_epitope_Rep2 969.51311062317 969.51200993586 82.734 2 -0.2294044919833791 0.055500991420047066 0.9438714419765777 ['TPH2|p.P138A|1|0.22|ENSG00000139287|chr12:71944450-71944450|C/G|missense_variant'] 48202 18727 KAYTSQFISL True PC9_epitope_Rep5 1156.6128246644398 1156.61172993586 77.049 2 -0.22941874617940772 0.055500991420047066 0.9438714419765777 ['ENSG00000131459|ENST00000253778|GFPT2'] 135332 3746 YCRWIYNFNIK True NCI_RA007_Epitope_Rep2 1518.7441902704998 1518.74254490379 19.212 3 -0.22942476711640108 0.055500991420047066 0.9438714419765777 ['nc|ENSG00000059769|Q9H1X3-2|DNAJC25', 'ENST00000463589.5_1_9:114405367-114415499:+|nuORF', 'ENSG00000059769|ENST00000313525|DNAJC25'] 45499 11817 ISERQAEVL True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 50.784 2 -0.22943433233659224 0.05551540756388163 0.9438714419765777 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 99640 15965 SLFSSQNNAF True PC9_epitope_Rep2 1113.50908787189 1113.50798993586 66.663 2 -0.2294427646691332 0.05551540756388163 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 100520 8451 SLPRWVRRFWP True H1975_Epitope_Rep1 1498.8309715592998 1498.82932490379 37.435 3 -0.22948424975586354 0.05551540756388163 0.9438714419765777 ['ENST00000272438.8_1_2:71215398-71215467:-|nuORF'] 55451 10079 LATVTVRP True PC9_epitope_Rep1 855.5178020807899 855.51670993586 43.639 2 -0.2295853393451932 0.05551540756388163 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 78013 19822 PALLQSVV True PC9_epitope_Rep3 825.49600400705 825.49490993586 81.478 2 -0.22960556090642792 0.055550408567881564 0.9438714419765777 ['ENST00000452079.5_2_1:3659748-3662767:-|nuORF', 'ENST00000418088.5_2_1:3659748-3662908:-|nuORF'] 39133 2746 HLDQSQKSLY True H1975_Epitope_Rep2 1217.60405088589 1217.6029499358601 14.599 2 -0.22962294468130742 0.055550408567881564 0.9438714419765777 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 35371 15867 GTASGFYTV True PC9_epitope_Rep2 901.4181476091701 901.4175949679301 66.289 1 -0.2296975873671572 0.05558437708441414 0.9438714419765777 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant'] 29061 20445 FTPDVKVWEV True PC9_epitope_Rep1 1218.62847472858 1218.62736993586 83.451 2 -0.22971905165864503 0.05558437708441414 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF'] 5008 12376 ALLDRERIPVY True PC9_epitope_Rep5 1343.7561348531901 1343.7544949037901 52.601 3 -0.22972919733292055 0.05558437708441414 0.9438714419765777 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 95348 18440 SAGPEGLLGV True PC9_epitope_Rep6 898.4759968384599 898.47488993586 83.574 2 -0.2297549120088231 0.05559878464502742 0.9438714419765777 ['ENSG00000130935|ENST00000253247|NOL11', 'nc|ENSG00000130935|Q9H8H0-2|NOL11'] 72986 9365 NCYKEINSQ True H1975_Epitope_Rep1 1097.4811588718899 1097.48006993586 40.929 2 -0.22977861435968552 0.05559878464502742 0.9438714419765777 ['ENSG00000139985|ENST00000603540|ADAM21', 'ENST00000529267.2_1_14:70712472-70713909:-|nuORF'] 106954 14257 SYLDRVRSL True PC9_epitope_Rep2 1107.60365696307 1107.60254993586 60.106 2 -0.22978902716873417 0.05559878464502742 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF', 'ENST00000577198.5_1_17:26603697-26633156:-|nuORF', 'ENST00000506277.1_1_5:36885388-36885895:+|nuORF', 'ENST00000510337.1_1_5:122971848-122972142:+|nuORF', 'ENST00000411618.1_1_9:30800375-30800732:-|nuORF', 'ENST00000396959.2_1_3:12829511-12830132:-|nuORF', 'ENST00000402024.2_1_6:116779363-116779789:-|nuORF'] 90122 25288 RGRRRRRRPMS True PC9_epitope_Rep3 1482.8650827355798 1482.8639899358602 102.67 2 -0.2297981123168684 0.05559878464502742 0.9438714419765777 ['ENSG00000074181|ENST00000263388|NOTCH3', 'NOTCH3|p.A1802Gfs*8|2|0.18|ENSG00000074181|chr19:15166049-15166050|-/C|frameshift_variant', 'NOTCH3|p.T250Hfs*122|1|0.35|ENSG00000074181|chr19:15191800-15191800|C/-|frameshift_variant'] 58201 8497 LESPVSSAIP True H1975_Epitope_Rep2 998.52842633414 998.5273299358599 37.638 2 -0.22985415253377847 0.05561525065767535 0.9438714419765777 ['ENST00000601780.5_1_19:50985512-50985971:+|nuORF'] 13157 20038 DLSTSDEDDLY True H1975_Epitope_Rep2 1271.50412163075 1271.50302993586 83.057 2 -0.22989776663469116 0.05561525065767535 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 117914 14835 VAQLKQLQAET True PC9_epitope_Rep1 1227.6823012065897 1227.6812099358601 61.882 2 -0.2300497270562425 0.055647148176277715 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 66102 16897 LSNQLHWPKIP True PC9_epitope_Rep3 1331.7350054857898 1331.73334490379 70.151 3 -0.2300559058694725 0.055647148176277715 0.9438714419765777 ['nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1'] 5757 14621 APEEHAVLV True PC9_epitope_Rep5 963.5025459394698 963.50144993586 61.24 2 -0.23009101446032468 0.055647148176277715 0.9438714419765777 ['ENSG00000187003|ENST00000333999|ACTL7A'] 73948 18534 NHLPSLVL True PC9_epitope_Rep5 891.51780208079 891.51670993586 76.314 2 -0.23011937857250822 0.055647148176277715 0.9438714419765777 ['nc|ENSG00000159873|Q8IWD4-2|CCDC117', 'nc|ENSG00000159873|Q8IWD4-4|CCDC117', 'nc|ENSG00000159873|Q8IWD4-3|CCDC117', 'ENSG00000159873|ENST00000249064|CCDC117'] 105039 6041 STIPPELVKQK True NCI_RA007_Epitope_Rep4 1238.72343774258 1238.7217949037902 29.853 3 -0.23014882510588733 0.055647148176277715 0.9438714419765777 ['ENSG00000058729|ENST00000283109|RIOK2'] 132214 9684 VYKKYPNVF True PC9_epitope_Rep2 1156.6280808057597 1156.62643490379 42.589 3 -0.2302135943782188 0.05566361026210984 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 19036 12831 ELGMIADA True PC9_epitope_Rep3 818.3844049527399 818.38385496793 54.374 1 -0.23022211312019283 0.05566361026210984 0.9438714419765777 ['TKFC|p.I279M|1|0.05|ENSG00000149476|chr11:61342816-61342816|C/G|missense_variant'] 66154 8188 LSPDTVQRL True H1975_Epitope_Rep1 1027.56620882519 1027.5651099358602 36.435 2 -0.23031102151533664 0.05571814914977957 0.9438714419765777 ['ENSG00000184571|ENST00000616349|PIWIL3', 'nc|ENSG00000184571|Q7Z3Z3|PIWIL3'] 22704 9449 ETVPEETVP True H1975_Epitope_Rep2 999.4760564081099 999.47494993586 41.313 2 -0.2303934324010841 0.05573564006149628 0.9438714419765777 ['FGD5|p.G502V|1|0.41|ENSG00000154783|chr3:14820576-14820576|G/T|missense_variant'] 46663 6173 ITVKETKA True NCI_RA007_Epitope_Rep2 888.5280324113199 888.52692993586 28.62 2 -0.23043933821784643 0.055753130325257465 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'RAD21-EIF3H|4|fusion'] 105192 8663 STPEAPYASL True PC9_epitope_Rep1 1034.4920408254197 1034.49094993586 38.161 2 -0.2305872111976829 0.055767521114239146 0.9438714419765777 ['nc|ENSG00000143365|P51449-2|RORC', 'ENSG00000143365|ENST00000318247|RORC'] 97304 10886 SFSDIPTIS True H1975_Epitope_Rep1 965.47057710485 965.46948993586 46.834 2 -0.23059114875122336 0.055767521114239146 0.9438714419765777 ['ENSG00000268629|ENST00000600991|TEX13A'] 80485 24351 PLLFLSQLL True PC9_epitope_Rep1 1042.64266824074 1042.6415699358602 98.495 2 -0.2305990948622646 0.055767521114239146 0.9438714419765777 ['ENST00000407418.7_1_22:39259662-39259899:-|nuORF'] 140226 12477 YWMHVQNTF True NCI_RA007_Epitope_Rep4 1224.53861417836 1224.53750993586 55.002 2 -0.2305991746174618 0.055767521114239146 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 109420 17221 TGQWSYAAP True PC9_epitope_Rep1 979.4399456829099 979.43884993586 71.059 2 -0.23066301650025112 0.05580353008723353 0.9438714419765777 ['ENSG00000124743|ENST00000370905|KLHL31'] 6492 10060 APTLPGSAA True PC9_epitope_Rep2 783.41266830591 783.41156993586 44.025 2 -0.23078889527561658 0.05582101715005371 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 27646 5453 FQDDDQTRV True PC9_epitope_Rep2 1122.4941660837399 1122.4930699358601 26.371 2 -0.23087995946045897 0.05583850356514492 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'nc|ENSG00000007923|Q9NVH1-3|DNAJC11', 'nc|ENSG00000007923|Q9NVH1-2|DNAJC11', 'ENSG00000007923|ENST00000377577|DNAJC11', 'NOL9-DNAJC11|1|fusion', 'ENST00000472414.1_1_1:6698189-6705162:-|nuORF'] 19545 14551 ELQSGEYWVDP True H1975_Epitope_Rep2 1321.58264673497 1321.58154993586 61.126 2 -0.2311527915314155 0.05591051354704891 0.9438714419765777 ['CON__P04258'] 102988 18029 SQISDTSVVL True PC9_epitope_Rep2 1047.5448046742702 1047.54427496793 74.653 1 -0.23121068202250963 0.05591051354704891 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 58641 8240 LFGGLCFRFRD True NCI_RA007_Epitope_Rep2 1329.6652116738098 1329.66410993586 36.689 2 -0.2314169111779315 0.055943408455398975 0.9438714419765777 ['nc|ENSG00000102226|P51784|USP11'] 130703 15830 VVDGNFEEV True PC9_epitope_Rep5 1006.46074069714 1006.46017496793 65.881 1 -0.23143762983769944 0.055943408455398975 0.9438714419765777 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 12232 13780 DIQLTQSPSF True NCI_RA007_Epitope_Rep3 1134.55570371114 1134.55460993586 61.534 2 -0.23145743450089937 0.055943408455398975 0.9438714419765777 ['nc|ENSG00000241755|A0A0C4DH69|IGKV1-9'] 83135 18090 PYRLIFEKF True PC9_epitope_Rep4 1211.6702799709099 1211.66863490379 77.65 3 -0.23145878350617496 0.055943408455398975 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 99199 17999 SLASVVVGVI True PC9_epitope_Rep3 942.5749826037398 942.57388993586 74.436 2 -0.23147824863371752 0.05595985408218062 0.9438714419765777 ['ENSG00000136856|ENST00000373371|SLC2A8'] 48194 8631 KAVVLTLA True NCI_RA007_Epitope_Rep3 813.5323895157699 813.53128993586 41.025 2 -0.23149785214861865 0.05595985408218062 0.9438714419765777 ['CON__P15497', 'APOA4|p.E312Kfs*29|1|0.31|ENSG00000110244|chr11:116821124-116821124|C/-|frameshift_variant', 'ENSG00000110244|ENST00000357780|APOA4'] 5534 6121 ANETENDIKV True PC9_epitope_Rep2 1131.54078192299 1131.53968993586 28.939 2 -0.2315214429953587 0.05597733501222132 0.9438714419765777 ['ENSG00000175820|ENST00000322527|CCDC168'] 140347 8039 YYEHVKARF True PC9_epitope_Rep1 1211.60874234351 1211.60764993586 35.743 2 -0.23159654086154274 0.0560081466395112 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 2857 8769 AEWPSHVP True H1975_Epitope_Rep3 921.43446637965 921.43336993586 38.736 2 -0.23160758240953638 0.0560081466395112 0.9438714419765777 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ENST00000573536.1_1_17:3920391-3920838:-|nuORF'] 132550 22623 VYPGYYLTF True PC9_epitope_Rep1 1121.54334812229 1121.54277496793 91.828 1 -0.23164543399059745 0.0560081466395112 0.9438714419765777 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 140250 13413 YWRRREEEERW True NCI_RA007_Epitope_Rep5 1693.80733556225 1693.80622993586 58.278 2 -0.23173685811756922 0.0560081466395112 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 105857 12504 SVKDGSQYFV True PC9_epitope_Rep5 1128.54513902744 1128.5440499358601 53.095 2 -0.23178222185014832 0.0560081466395112 0.9438714419765777 ['ENSG00000139117|ENST00000331366|CPNE8', 'ENST00000546603.5_1_12:39047686-39073432:-|nuORF', 'nc|ENSG00000139117|Q86YQ8-2|CPNE8', 'ENST00000552259.5_1_12:39040880-39073423:-|nuORF'] 117030 10247 TYQDRLTKL True PC9_epitope_Rep1 1136.61897267404 1136.61733490379 44.297 3 -0.23182860277466252 0.0560081466395112 0.9438714419765777 ['ENST00000519879.1_1_8:118533115-118541135:+|nuORF', 'nc|ENSG00000164758|Q96HR3-2|MED30', 'ENSG00000164758|ENST00000297347|MED30'] 84454 5761 QGKYPEVH True NCI_RA007_Epitope_Rep5 956.4715801643599 956.47048993586 28.846 2 -0.2318571922069886 0.05602562440984244 0.9438714419765777 ['ENSG00000022840|ENST00000325954|RNF10', 'nc|ENSG00000022840|Q8N5U6-2|RNF10'] 116230 23582 TVTTVILEV True PC9_epitope_Rep3 973.5695628701299 973.56846993586 95.993 2 -0.23189500440449423 0.05604310153299267 0.9438714419765777 ['ENSG00000119203|ENST00000238112|CPSF3'] 36103 10139 GVEIC[Carbamidomethyl]IATPGR True NCI_RA007_Epitope_Rep1 1171.6019429903397 1171.6008499358602 43.448 2 -0.2319081483063861 0.05605954011922835 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 65544 9789 LSGDLDSCVI True PC9_epitope_Rep2 1020.47976188956 1020.47866993586 42.99 2 -0.23195643498374746 0.05605954011922835 0.9438714419765777 ['WDR72|p.L895Cfs*7|1|0.3|ENSG00000166415|chr15:53615522-53615522|A/-|frameshift_variant', 'ENSG00000166415|ENST00000360509|WDR72'] 5918 12844 APHPPLSVV True PC9_epitope_Rep1 915.51780208079 915.51670993586 54.278 2 -0.23201689726882993 0.05609449052132701 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3'] 126105 14475 VPEDEILTV True PC9_epitope_Rep5 1013.52809198097 1013.52698993586 60.678 2 -0.23203976876619956 0.05609449052132701 0.9438714419765777 ['ENSG00000110318|ENST00000263468|CEP126'] 139588 9584 YTPHRGRLW True PC9_epitope_Rep3 1184.6203100867199 1184.6186549037902 41.816 3 -0.23205691480576007 0.056109887261889334 0.9438714419765777 ['ENSG00000103671|ENST00000261884|TRIP4', 'ENST00000560567.5_1_15:64710826-64716404:+|nuORF'] 108174 8442 TDTDTNSQEDP True H1975_Epitope_Rep2 1221.46331944793 1221.46222993586 37.422 2 -0.23206275104260873 0.056109887261889334 0.9438714419765777 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000456826.2_1_1:149262279-149263299:+|nuORF', 'nc|ENSG00000291158|P0C866|LINC00869'] 33244 8243 GLAEVAAAV True NCI_RA007_Epitope_Rep4 799.4439684341899 799.44341496793 38.502 1 -0.23209464267045973 0.056109887261889334 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 55092 11469 LALMVYSIVK True NCI_RA007_Epitope_Rep2 1135.66750308959 1135.6664099358602 49.205 2 -0.23225742714379555 0.056182895223991114 0.9438714419765777 ['ENSG00000011083|ENST00000230671|SLC6A7'] 42695 12000 IEWDKPPVP True NCI_RA007_Epitope_Rep4 1079.56514619603 1079.56404993586 53.162 2 -0.23232739542352543 0.05621887784380149 0.9438714419765777 ['ENSG00000154447|ENST00000284637|SH3RF1', 'nc|ENSG00000154447|Q7Z6J0-3|SH3RF1'] 78872 12601 PESVFRETPP True PC9_epitope_Rep3 1157.57168812845 1157.5700549037902 53.493 3 -0.23239500690564793 0.05625381781833663 0.9438714419765777 ['ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant'] 24367 9941 FAEGKPLEL True NCI_RA007_Epitope_Rep3 1002.5385970950198 1002.53750993586 46.184 2 -0.23240191858819337 0.05625381781833663 0.9438714419765777 ['ENSG00000134256|ENST00000682167|CD101'] 47417 9089 IYIKQIKTF True NCI_RA007_Epitope_Rep4 1152.6906810623198 1152.6890249037901 41.793 3 -0.23241712540682002 0.05626503794188414 0.9438714419765777 ['ENSG00000103479|ENST00000262133|RBL2'] 130154 15648 VTRQQELVL True PC9_epitope_Rep1 1084.6240580544797 1084.62296993586 65.011 2 -0.23244525316146636 0.05626503794188414 0.9438714419765777 ['ENST00000595302.1_1_19:58864324-58864802:+|nuORF'] 65197 19335 LSDWYTMLY True H1975_Epitope_Rep1 1190.53179746242 1190.5307099358602 80.548 2 -0.2324582734871877 0.05626503794188414 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 137598 7255 YLTHDSPSV True PC9_epitope_Rep4 1017.47672511445 1017.47562993586 35.216 2 -0.23246305404127857 0.05626503794188414 0.9438714419765777 ['ENSG00000124562|ENST00000244520|SNRPC'] 111080 20634 TLEDIEIIQ True PC9_epitope_Rep6 1072.5652057656798 1072.5641099358602 92.103 2 -0.23248910765395508 0.05626503794188414 0.9438714419765777 ['ENST00000456360.5_1_Y:23556925-23559248:-|nuORF'] 104443 16110 SSLLPKEIV True PC9_epitope_Rep2 984.58554728744 984.58444993586 67.226 2 -0.23249757697379458 0.05626503794188414 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 118164 15574 VAVPLYDTL True NCI_RA007_Epitope_Rep4 989.54334812229 989.54279496793 67.656 1 -0.23255276427102098 0.05626503794188414 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 22778 6826 EVDEDFDSK True PC9_epitope_Rep3 1082.44039917538 1082.4393099358601 31.272 2 -0.2326117327649519 0.056280421224066776 0.9438714419765777 ['ENSG00000142634|ENST00000375980|EFHD2'] 72837 15934 NALLSLVGSDP True H1975_Epitope_Rep1 1084.57643915572 1084.5758749679298 66.602 1 -0.2326274699366591 0.056280421224066776 0.9438714419765777 ['nc|ENSG00000276850|P13928-3|ANXA8', 'nc|ENSG00000264230|Q5VT79-2|ANXA8L1', 'ENSG00000265190|ENST00000585281|ANXA8', 'ENSG00000264230|ENST00000619162|ANXA8L1'] 49320 17699 KIAESIPYL True PC9_epitope_Rep4 1032.5855472874398 1032.5844499358602 76.104 2 -0.2326404427566744 0.056280421224066776 0.9438714419765777 ['nc|ENSG00000198363|Q12797-10|ASPH', 'ENSG00000198363|ENST00000379454|ASPH'] 61710 16679 LLIHRKNLNYL True PC9_epitope_Rep3 1395.83505388023 1395.83341490379 69.293 3 -0.23277582021662052 0.056315351161284354 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 116859 12020 TYNKHINISF True PC9_epitope_Rep2 1235.62987171091 1235.62822490379 51.552 3 -0.23277817803292236 0.056315351161284354 0.9438714419765777 ['ENSG00000173451|ENST00000308086|THAP2'] 19630 16744 ELRREFTV True PC9_epitope_Rep6 1048.56654317836 1048.5654499358602 76.895 2 -0.2328312873633758 0.05633177267427873 0.9438714419765777 ['ENSG00000197272|ENST00000356897|IL27'] 15318 12299 EAIYPPEVP True H1975_Epitope_Rep1 1013.5069626135698 1013.50586993586 52.335 2 -0.23287387938092638 0.05633177267427873 0.9438714419765777 ['ENSG00000091536|ENST00000647165|MYO15A'] 46906 15634 IVISKLTQI True PC9_epitope_Rep6 1013.6484818971699 1013.64738993586 72.338 2 -0.23290302235297725 0.056347150259067356 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 55539 7878 LAYDPQSNKF True NCI_RA007_Epitope_Rep2 1181.57168812845 1181.5705899358602 35.275 2 -0.23291691159987002 0.056347150259067356 0.9438714419765777 ['ENSG00000175946|ENST00000684634|KLHL38'] 2431 7454 AEQLRQMM True H1975_Epitope_Rep2 1005.47357139365 1005.47246993586 33.618 2 -0.23294112420678761 0.056347150259067356 0.9438714419765777 ['ENST00000270502.6_1_19:11040414-11040630:+|nuORF'] 101668 12640 SPFRVNVGA True PC9_epitope_Rep3 945.5032146458099 945.50210993586 53.642 2 -0.2330095085043225 0.0564190814551645 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.N756K|1|0.07|ENSG00000196924|chrX:154364034-154364034|G/T|missense_variant'] 106516 16209 SVVQGTLGV True PC9_epitope_Rep3 858.4810822188999 858.47998993586 67.484 2 -0.23301265490329365 0.0564190814551645 0.9438714419765777 ['ENSG00000163872|ENST00000305135|YEATS2', 'YEATS2-ATP11B|1|fusion'] 457 17802 [Acetylation]-AALTTLFK True H1975_Epitope_Rep3 905.52221907119 905.52167496793 74.471 1 -0.23304750115881945 0.056433408577878104 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2', 'CNDP2|p.W309Cfs*23|1|0.3|ENSG00000133313|chr18:74516250-74516250|G/-|frameshift_variant', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 6520 13676 APVAAPVAA True PC9_epitope_Rep2 765.43848913093 765.4379449679301 57.895 1 -0.23307196199816324 0.056433408577878104 0.9438714419765777 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 6934 11646 AQLILKAI True NCI_RA007_Epitope_Rep4 868.57458868092 868.57348993586 51.753 2 -0.23312159670515742 0.056433408577878104 0.9438714419765777 ['nc|ENSG00000113648|O75367|MACROH2A1', 'nc|ENSG00000113648|O75367-3|MACROH2A1', 'ENSG00000113648|ENST00000511689|MACROH2A1', 'ENST00000511494.5_1_5:134670668-134681802:-|nuORF', 'ENST00000512507.5_1_5:134670668-134688768:-|nuORF'] 67402 5904 LTEAAPPAPP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 27.696 2 -0.23322134569901543 0.056433408577878104 0.9438714419765777 ['ENSG00000188766|ENST00000691638|SPRED3'] 61109 19635 LLCVYVWQI True PC9_epitope_Rep6 1135.60998821347 1135.6088899358601 88.186 2 -0.2332722812957053 0.056449822380106575 0.9438714419765777 ['ENST00000290551.4_1_1:203277319-203277361:+|nuORF'] 115920 13277 TVPKPDVVVQV True PC9_epitope_Rep6 1179.68632395787 1179.6852299358602 62.721 2 -0.23328365990275812 0.056449822380106575 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 95270 11435 SADRGLVL True PC9_epitope_Rep2 829.46576650793 829.46466993586 49.306 2 -0.23335568865311512 0.05650428315047457 0.9438714419765777 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-7|FCAR'] 15438 11952 EANLQALIAT True H1975_Epitope_Rep2 1042.56587447202 1042.56476993586 51.051 2 -0.23341110153730082 0.056519647746614374 0.9438714419765777 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-2|UBQLN1', 'ENSG00000188021|ENST00000338222|UBQLN2', 'ENSG00000175520|ENST00000311659|UBQLN3', 'KIAA0907-UBQLN4|1|fusion', 'ENSG00000160803|ENST00000368309|UBQLN4'] 31528 12254 GEFGDLNAV True NCI_RA007_Epitope_Rep4 920.4239612655999 920.4234149679301 54.132 1 -0.23343402084062023 0.056519647746614374 0.9438714419765777 ['ENSG00000080298|ENST00000617270|RFX3'] 91868 6852 RPNPPPVSV True PC9_epitope_Rep6 961.53451477409 961.53340993586 35.232 2 -0.23351315069632067 0.056519647746614374 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C'] 31016 21462 GAVDPLLAL True PC9_epitope_Rep4 867.50656869075 867.5060249679301 90.743 1 -0.23355094913907926 0.05655351031356951 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF', 'ENST00000583392.1_1_17:66039031-66039124:+|nuORF'] 66902 19481 LSWRLCFNQVL True PC9_epitope_Rep1 1377.72272654993 1377.7216299358602 79.751 2 -0.23358611569432447 0.05655351031356951 0.9438714419765777 ['ENST00000382044.8_1_15:43699501-43699630:-|nuORF'] 3148 6697 AGDVAAVLG True NCI_RA007_Epitope_Rep2 771.41266830591 771.41211496793 30.662 1 -0.2335880053696399 0.05655351031356951 0.9438714419765777 ['ENSG00000259431|ENST00000288014|THTPA'] 66966 20767 LSYWHCSWAK True PC9_epitope_Rep3 1279.58081334351 1279.5797099358601 85.151 2 -0.2336247298629239 0.05656887047245551 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 6994 8927 AQQIQKVIL True NCI_RA007_Epitope_Rep4 1039.6389798426299 1039.6378899358601 41.173 2 -0.23363162686319175 0.05656887047245551 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF'] 43504 13600 IIAPMMLVNL True PC9_epitope_Rep2 1113.62900940589 1113.62790993586 57.6 2 -0.23363957388150208 0.05656887047245551 0.9438714419765777 ['OR5D16|p.L287Vfs*11|1|0.12|ENSG00000205029|chr11:55839602-55839603|-/C|frameshift_variant', 'ENSG00000205029|ENST00000378396|OR5D16'] 140355 5171 YYEHVKARF True PC9_epitope_Rep6 1211.60874234351 1211.60710490379 27.63 3 -0.2336566901363372 0.056584228926582936 0.9438714419765777 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 101207 16553 SLVYFHCSAL True PC9_epitope_Rep1 1138.5481162329002 1138.54648490379 68.493 3 -0.2336718941942519 0.056584228926582936 0.9438714419765777 ['nc|ENSG00000103310|Q05996-2|ZP2', 'ENSG00000103310|ENST00000574091|ZP2'] 5856 6358 APGKGILAA True PC9_epitope_Rep6 796.4806882960798 796.47958993586 33.033 2 -0.2336978585068083 0.056584228926582936 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000567555.1_1_16:30077179-30078758:+|nuORF', 'ENST00000564521.6_1_16:30075769-30079042:+|nuORF', 'ENST00000582381.1_1_17:26902119-26903857:-|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC', 'ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 108451 10773 TEELLANSL True PC9_epitope_Rep5 988.50769088956 988.50658993586 46.43 2 -0.23375226860023793 0.056600632595305476 0.9438714419765777 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 126647 7422 VPQPSGPPA True PC9_epitope_Rep5 848.4392174069199 848.43812993586 33.504 2 -0.2337680636473914 0.056600632595305476 0.9438714419765777 ['ENST00000588300.1_1_19:45920077-45926632:-|nuORF', 'nc|ENSG00000012061|P07992-4|ERCC1', 'ENST00000592905.5_1_19:45918043-45926632:-|nuORF', 'nc|ENSG00000012061|P07992-2|ERCC1', 'ENSG00000012061|ENST00000300853|ERCC1', 'nc|ENSG00000012061|P07992-3|ERCC1'] 134272 10929 WRRWCWRWPWR True NCI_RA007_Epitope_Rep2 1772.8735221609597 1772.87188490379 47.118 3 -0.23385885040484833 0.056618082272861796 0.9438714419765777 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 113921 11627 TRIGLINDM-[Oxidation] True PC9_epitope_Rep2 1047.53828020563 1047.5371899358602 50.049 2 -0.23388612535003755 0.056633436292008066 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.P364L|1|0.32|ENSG00000107581|chr10:119065430-119065430|G/A|missense_variant'] 30914 7121 GASEASISSYP True H1975_Epitope_Rep2 1067.47711903727 1067.4760299358602 32.323 2 -0.23388807521861674 0.056633436292008066 0.9438714419765777 30255 4695 GAAGVNRL True PC9_epitope_Rep4 756.4242360491199 756.42312993586 24.601 2 -0.23391069886047983 0.056633436292008066 0.9438714419765777 ['ENSG00000136444|ENST00000258955|RSAD1', 'ENST00000443328.2_1_17:48556221-48557532:+|nuORF'] 4146 9926 AHVQNGIAL True PC9_epitope_Rep3 921.5032146458099 921.50210993586 43.137 2 -0.23399655219768983 0.05664564570118174 0.9438714419765777 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 66818 19390 LSVPGLVSV True PC9_epitope_Rep6 869.52221875489 869.52167496793 87.236 1 -0.23399915876570979 0.05664564570118174 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 45756 15051 ISNHDVIL True PC9_epitope_Rep4 909.4919812557699 909.49088993586 65.826 2 -0.23402747547546038 0.05664564570118174 0.9438714419765777 ['MACF1-INPP5B|1|fusion', 'nc|ENSG00000204084|P32019-3|INPP5B', 'ENSG00000204084|ENST00000373024|INPP5B', 'nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 33425 13541 GLGEETCSGNV True PC9_epitope_Rep5 1064.44443901 1064.4433499358602 57.107 2 -0.23403084697149792 0.05664564570118174 0.9438714419765777 ['ENSG00000282936|ENST00000634965|unknown'] 86793 16573 QRNEVVVEL True PC9_epitope_Rep5 1084.58767254576 1084.58656993586 68.752 2 -0.23405840663425823 0.05664564570118174 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 109455 13607 TGSVDYLAL True NCI_RA007_Epitope_Rep3 937.47566248529 937.47456993586 60.822 2 -0.23408447143306169 0.05664564570118174 0.9438714419765777 ['nc|ENSG00000033327|Q9UQC2-2|GAB2', 'ENSG00000033327|ENST00000361507|GAB2'] 97580 20364 SGYPGLLNGV True PC9_epitope_Rep2 975.5025459394699 975.50144993586 83.754 2 -0.23430712674544724 0.056737064023375375 0.9438714419765777 ['ENSG00000140006|ENST00000620954|WDR89'] 30875 8356 GARLAAEGYLV True H1975_Epitope_Rep2 1118.6084079903399 1118.60730993586 37.094 2 -0.23432416844414536 0.05677195058806125 0.9438714419765777 ['ENSG00000168758|ENST00000305476|SEMA4C', 'ENST00000467747.1_1_2:97526365-97527817:-|nuORF', 'ENST00000474420.1_1_2:97526365-97527817:-|nuORF'] 52620 7874 KQDLPNAM True PC9_epitope_Rep3 915.44840219163 915.44730993586 35.271 2 -0.23435050559748294 0.05677195058806125 0.9438714419765777 ['ENSG00000143761|ENST00000272102|ARF1', 'ENSG00000134287|ENST00000256682|ARF3', 'nc|ENSG00000134287|P61204-2|ARF3', 'ENST00000470670.5_1_1:228284963-228285711:+|nuORF', 'ENSG00000168374|ENST00000303436|ARF4'] 101676 17841 SPFTVGVAA True PC9_epitope_Rep1 847.4439684341899 847.44286993586 73.419 2 -0.23437993131756918 0.05678834276415548 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 5778 17241 APELQGVEV True PC9_epitope_Rep1 940.4865615221598 940.48546993586 71.136 2 -0.23440410953776242 0.05678834276415548 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2', 'ENST00000534765.1_1_11:65835264-65836005:+|nuORF'] 105193 8668 STPEAPYASL True PC9_epitope_Rep5 1034.4920408254197 1034.49094993586 38.285 2 -0.23447633706456952 0.056841715976331364 0.9438714419765777 ['nc|ENSG00000143365|P51449-2|RORC', 'ENSG00000143365|ENST00000318247|RORC'] 106331 6020 SVSDGIHSV True PC9_epitope_Rep6 899.4348603024702 899.43376993586 31.495 2 -0.2344844510905904 0.056841715976331364 0.9438714419765777 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 90361 8299 RIIPRHLQL True NCI_RA007_Epitope_Rep4 1144.719295852 1144.7176649037901 38.732 3 -0.23460816454482478 0.05689298128836624 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 29864 17653 FVWSGTAEA True PC9_epitope_Rep4 966.4446967101799 966.44414496793 75.928 1 -0.2346114152938002 0.05689298128836624 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 70638 5055 MAQTDPETND True PC9_epitope_Rep5 1120.43426824912 1120.4331699358602 24.471 2 -0.23468717502564215 0.05689298128836624 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 125800 12930 VNLLREQL True PC9_epitope_Rep2 983.5763795860698 983.57528993586 55.029 2 -0.23470405715334738 0.05689298128836624 0.9438714419765777 ['ENSG00000204889|ENST00000377755|KRT40', 'CON__Q6IFU5', 'chr17:40981151-40982307|126|24.6|0.36|6.11|-|0|KRT40,KRT40|1'] 98450 15212 SIKDLLQTV True PC9_epitope_Rep4 1015.5913609438701 1015.59026993586 66.437 2 -0.23476418279395023 0.05690831438238394 0.9438714419765777 ['ENSG00000132855|ENST00000371129|ANGPTL3'] 75241 6290 NPKEFYHEV True PC9_epitope_Rep6 1161.54547338061 1161.54382490379 32.71 3 -0.23476795027878528 0.05690831438238394 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 104202 5715 SSDKGRLCYY True H1975_Epitope_Rep1 1190.53900810118 1190.53735490379 27.051 3 -0.23478823802967452 0.05690831438238394 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 6804 22099 AQFPPEEWP True PC9_epitope_Rep2 1099.4974605590298 1099.49636993586 90.475 2 -0.2350358365805395 0.056999704185771334 0.9438714419765777 ['ENSG00000165730|ENST00000298596|STOX1', 'nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 39928 16106 HQLTEVGTMNI True PC9_epitope_Rep3 1241.60742201417 1241.60632993586 67.103 2 -0.23507634034002944 0.05701397618871552 0.9438714419765777 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 98686 5400 SIQRISSVEGR True NCI_RA007_Epitope_Rep1 1230.66804812478 1230.66640490379 25.079 3 -0.23509540131371218 0.05701397618871552 0.9438714419765777 ['OR13F1|p.L226Q|2|0.26|ENSG00000186881|chr9:104504939-104504939|T/A|missense_variant'] 101572 21616 SPDLSFLVV True PC9_epitope_Rep4 975.52769805815 975.52660993586 91.336 2 -0.2351154119569738 0.05701397618871552 0.9438714419765777 ['nc|ENSG00000164306|Q96LW4-2|PRIMPOL', 'ENSG00000164306|ENST00000314970|PRIMPOL'] 59399 5409 LGLNKTLAI True NCI_RA007_Epitope_Rep5 941.5909670210499 941.58986993586 27.494 2 -0.2351392656437196 0.05701397618871552 0.9438714419765777 ['nc|ENSG00000285467|P0CG22|DHRS4L1', 'ENST00000559270.5_2_14:24507775-24520174:+|nuORF'] 6839 16333 AQIEAKFYEEV True PC9_epitope_Rep4 1325.6503323719699 1325.6492299358601 70.787 2 -0.23525404726460464 0.05704567720945709 0.9438714419765777 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1', 'ENST00000549988.5_1_12:76453547-76478450:-|nuORF', 'ENST00000550917.1_1_12:32879649-32880297:-|nuORF'] 46290 6853 ITEKTC[Carbamidomethyl]RGF True H1975_Epitope_Rep2 1110.54917914149 1110.5480899358602 31.278 2 -0.23526101416305603 0.05704567720945709 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2', 'ENST00000486886.1_1_3:111680917-111693407:+|nuORF', 'FARSB-PHLDB2|1|fusion'] 86157 10285 QPSLHKLSI True PC9_epitope_Rep2 1021.5920296502101 1021.59092993586 44.892 2 -0.23526381174493807 0.05704567720945709 0.9438714419765777 ['ENSG00000148606|ENST00000372371|POLR3A', 'ENST00000484760.1_1_10:79773365-79779077:-|nuORF'] 104427 3370 SSIRHMIRK True NCI_RA007_Epitope_Rep2 1126.63933127914 1126.6376849037902 17.769 3 -0.23528234241077448 0.05704567720945709 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28'] 44474 7741 INQVWQNEN True H1975_Epitope_Rep3 1143.5308859456297 1143.5297899358602 34.758 2 -0.235302614259637 0.05704567720945709 0.9438714419765777 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1'] 3137 16618 AGDRFSLDVL True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 69.165 2 -0.23538537000913967 0.05706310769344523 0.9438714419765777 ['nc|ENSG00000116703|P20941-2|PDC', 'ENSG00000116703|ENST00000391997|PDC', 'nc|ENSG00000116703|P20941-3|PDC'] 99273 22330 SLDDLTNLV True PC9_epitope_Rep1 988.5076908895601 988.50714496793 90.706 1 -0.2355518875150474 0.057135991423131666 0.9438714419765777 ['ENSG00000119912|ENST00000265986|IDE', 'IDE|p.I437Vfs*24|2|0.19|ENSG00000119912|chr10:92506459-92506459|T/AC|frameshift_variant', 'ENST00000478361.6_1_10:94240585-94297282:-|nuORF'] 66885 10951 LSWMCKTLNDP True PC9_epitope_Rep2 1306.6049794860198 1306.60388993586 47.443 2 -0.23561607794864867 0.057151306790876495 0.9438714419765777 ['nc|ENSG00000162585|Q6NZ36-4|FAAP20'] 55103 16586 LALPRALQ True PC9_epitope_Rep5 880.5494365622399 880.54832993586 68.804 2 -0.2356195798752662 0.057151306790876495 0.9438714419765777 ['ENST00000597244.1_1_19:16688850-16689066:-|nuORF'] 63899 16771 LPVRLPLA True PC9_epitope_Rep6 877.5749230340899 877.57382993586 77.004 2 -0.23562369420057594 0.057151306790876495 0.9438714419765777 ['ENST00000292591.11_1_5:179228908-179233794:-|nuORF'] 107262 21339 SYPTFFPRF True PC9_epitope_Rep1 1160.5654805491997 1160.5643899358602 86.912 2 -0.23565322412594314 0.05718404613166747 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'ENST00000481663.1_1_3:148801501-148804285:-|nuORF'] 106211 17208 SVPNKDVFQEL True PC9_epitope_Rep2 1274.65066672514 1274.6495699358602 71.448 2 -0.23570126597523072 0.05718404613166747 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 115651 17574 TVKDVNLDI True PC9_epitope_Rep2 1015.5549754351499 1015.55386993586 72.874 2 -0.23575039787805788 0.05718404613166747 0.9438714419765777 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'nc|ENSG00000141664|Q9C0B9-2|ZCCHC2'] 94161 12814 RWKRYRRWMKN True NCI_RA007_Epitope_Rep1 1678.9103015924995 1678.9092099358602 53.832 2 -0.2357683068535005 0.05718404613166747 0.9438714419765777 ['nc|ENSG00000059769|Q9H1X3-2|DNAJC25', 'ENST00000463589.5_1_9:114405367-114415499:+|nuORF', 'ENSG00000059769|ENST00000313525|DNAJC25'] 10815 14554 DAGFALFG True H1975_Epitope_Rep3 796.3755545211999 796.3750049679301 61.349 1 -0.23579491885834436 0.057199356853758154 0.9438714419765777 ['RBM5|p.E587G|1|0.11|ENSG00000003756|chr3:50114092-50114092|A/G|missense_variant'] 84809 8549 QHKFLVAV True PC9_epitope_Rep3 940.5494365622397 940.54832993586 37.838 2 -0.2358043155291412 0.057199356853758154 0.9438714419765777 ['ENSG00000141002|ENST00000263346|TCF25', 'ENST00000568870.1_1_16:89958640-89960287:+|nuORF'] 55035 13000 LALDVVRA True PC9_epitope_Rep1 855.5178020807899 855.51670993586 54.875 2 -0.23584964316804197 0.057199356853758154 0.9438714419765777 ['ENST00000540276.1_1_11:60692015-60695132:+|nuORF'] 57269 12104 LEGDRCLVL True PC9_epitope_Rep2 1016.5324661687599 1016.53136993586 51.867 2 -0.2359038220449654 0.05721572323557132 0.9438714419765777 ['ENST00000546793.1_1_12:53439809-53447194:-|nuORF'] 139239 9589 YTAESHTTL True NCI_RA007_Epitope_Rep3 1021.4716397340101 1021.47054993586 44.804 2 -0.2359161232165449 0.05721572323557132 0.9438714419765777 ['ENST00000407073.5_2_2:148990944-149215877:+|nuORF'] 20517 16022 EPVVHGDIIV True H1975_Epitope_Rep2 1076.5866099165999 1076.58550993586 66.827 2 -0.23600718236925675 0.05723208840759152 0.9438714419765777 ['ENSG00000175065|ENST00000308128|DSG4', 'nc|ENSG00000175065|Q86SJ6-2|DSG4'] 6472 5436 APTASTVSA True PC9_epitope_Rep1 803.40249754503 803.40140993586 25.743 2 -0.236032803994243 0.05723208840759152 0.9438714419765777 ['ENST00000338302.7_1_1:156876157-156878457:+|nuORF'] 2732 9181 AETSPAPIP True H1975_Epitope_Rep3 881.44944773745 881.4488949679301 40.305 1 -0.2361584223312919 0.05728011825572801 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 2652 20174 AESYQEILI True PC9_epitope_Rep6 1064.5389910178399 1064.5378899358602 90.272 2 -0.23616127924872068 0.05728011825572801 0.9438714419765777 ['ENST00000401788.2_1_6:27978946-27979378:+|nuORF'] 84006 3923 QENGNVHAIA True NCI_RA007_Epitope_Rep4 1051.5046711977898 1051.50356993586 21.322 2 -0.23619126394388282 0.05728011825572801 0.9438714419765777 ['ENSG00000109321|ENST00000395748|AREG'] 78087 20163 PALVYQDYQY True PC9_epitope_Rep2 1258.58700383942 1258.58536490379 82.969 3 -0.2361932820856714 0.05728011825572801 0.9438714419765777 ['nc|ENSG00000284491|A0A1W2PP97|THSD8'] 61087 19335 LLCHTLCDIL True PC9_epitope_Rep4 1142.58278748946 1142.5816899358601 82.479 2 -0.2362114920714817 0.05728011825572801 0.9438714419765777 ['nc|ENSG00000148481|Q9H8M7-2|MINDY3', 'ENST00000477891.1_1_10:15883425-15902451:-|nuORF', 'ENSG00000148481|ENST00000277632|MINDY3'] 135664 8288 YEGAGQILIR True H1975_Epitope_Rep3 1118.6084079903399 1118.60730993586 36.863 2 -0.23625256773608425 0.05728011825572801 0.9438714419765777 ['ENSG00000157353|ENST00000288078|FCSK', 'nc|ENSG00000157353|Q8N0W3-2|FCSK'] 34911 14967 GQVVHLTLV True PC9_epitope_Rep6 964.57056592964 964.56946993586 69.58 2 -0.23625497206708918 0.05728011825572801 0.9438714419765777 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'PATJ|p.P937Rfs*9|2|0.25|ENSG00000132849|chr1:61864607-61864607|C/-|frameshift_variant'] 3235 4703 AGFAGDDAPR True NCI_RA007_Epitope_Rep5 975.4410083120698 975.44045496793 24.777 1 -0.23628211626606924 0.057295419692182624 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 88281 19046 QYGGDLTNTF True PC9_epitope_Rep5 1114.49310345458 1114.4925749679298 78.289 1 -0.23629016160035116 0.057295419692182624 0.9438714419765777 ['ENSG00000164171|ENST00000296585|ITGA2'] 102131 4761 SPQRIASAV True PC9_epitope_Rep6 927.5137793295098 927.51268993586 25.758 2 -0.23633593633323655 0.057295419692182624 0.9438714419765777 ['ENSG00000112139|ENST00000434837|MDGA1', 'nc|ENSG00000112139|Q8NFP4-2|MDGA1'] 126974 7231 VPVTKEGL True PC9_epitope_Rep4 841.4909186266099 841.48982993586 35.119 2 -0.23639513426158218 0.05731177829099307 0.9438714419765777 ['ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 55668 13264 LDATDLPAS True PC9_epitope_Rep5 901.4392769765699 901.43872496793 56.03 1 -0.23641191343466122 0.05731177829099307 0.9438714419765777 ['AluJb_dup56968|chr8:98045693-98046014:+|1.235187719160256|0.0002169198745066|12.48|502.0|24|3|anti-sense'] 122647 6662 VGTPGNSSVP True H1975_Epitope_Rep2 913.45051036661 913.44940993586 30.533 2 -0.23648333228454985 0.057329194841665744 0.9438714419765777 ['ENST00000602967.5_1_10:81610043-81610133:+|nuORF'] 75356 5441 NQDDLTHKL True PC9_epitope_Rep2 1082.5356369729002 1082.53452993586 26.321 2 -0.23662536758676336 0.05738356088458625 0.9438714419765777 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 120191 6164 VFLLHNNDQ True NCI_RA007_Epitope_Rep3 1098.54580773378 1098.54470993586 31.245 2 -0.23667470816740527 0.05739885460927397 0.9438714419765777 ['UBAP1|p.L481F|1|0.07|ENSG00000165006|chr9:34251466-34251466|G/T|missense_variant'] 75250 19695 NPLGMPVPAA True PC9_epitope_Rep1 965.5004377644899 965.49934993586 80.582 2 -0.23668957758885956 0.05739885460927397 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1', 'nc|ENSG00000101266|P68400-2|CSNK2A1'] 36910 10489 GVQSYESSV True PC9_epitope_Rep5 954.42944056886 954.42834993586 45.332 2 -0.23670654692513332 0.05739885460927397 0.9438714419765777 ['ENSG00000257446|ENST00000547628|ZNF878'] 56425 17976 LDSINDFLS True PC9_epitope_Rep1 1022.49204082542 1022.4909499358599 73.937 2 -0.23671766963282206 0.05741202549182599 0.9438714419765777 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 11000 7116 DDEVQVVR True PC9_epitope_Rep5 958.4719740871799 958.47086993586 32.339 2 -0.2367499978071401 0.05741202549182599 0.9438714419765777 ['ENSG00000161970|ENST00000648839|RPL26', 'ENST00000602923.1_1_11:2356544-2356979:-|nuORF', 'ENSG00000037241|ENST00000265100|RPL26L1', 'ENST00000415894.1_1_1:165788676-165788994:+|nuORF', 'ENST00000495104.1_1_4:165841962-165842070:-|nuORF'] 59785 11052 LHACLVQCSR True PC9_epitope_Rep4 1128.55321869668 1128.5515649037902 50.287 3 -0.23676260259870163 0.05741202549182599 0.9438714419765777 ['ENSG00000135476|ENST00000257934|ESPL1', 'ESPL1|p.E1511Kfs*24|1|0.2|ENSG00000135476|chr12:53288323-53288323|G/-|frameshift_variant'] 30855 6865 GAQSLQREL True NCI_RA007_Epitope_Rep5 1000.53015766964 1000.52906993586 33.088 2 -0.2367650276087111 0.05741202549182599 0.9438714419765777 ['ENST00000479606.5_1_22:21351676-21351817:+|nuORF'] 99282 12112 SLDFFHSDRK True H1975_Epitope_Rep1 1250.60438523906 1250.6032899358602 51.602 2 -0.236765643737145 0.05741202549182599 0.9438714419765777 ['ENST00000590311.5_1_17:67108322-67108499:-|nuORF'] 117896 15532 VAQEVWQL True PC9_epitope_Rep3 971.5076313199099 971.50652993586 64.893 2 -0.23683765207862928 0.05742307266078091 0.9438714419765777 ['ENST00000526950.1_1_12:104705113-104707050:+|nuORF'] 64596 10599 LREERAYIL True PC9_epitope_Rep2 1161.6506071554898 1161.6495099358601 46.085 2 -0.2368532733913532 0.05742307266078091 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 53542 8042 KVPGCRRRRRE True NCI_RA007_Epitope_Rep2 1411.8055021707899 1411.8044099358601 35.913 2 -0.23685733805928336 0.05742307266078091 0.9438714419765777 ['ENST00000487849.7_1_17:46669689-46683672:+|nuORF', 'ENST00000491264.5_1_17:46679554-46683672:+|nuORF'] 20470 15814 EPSLASTLG True PC9_epitope_Rep4 873.44436235701 873.44326993586 68.753 2 -0.2368836384259807 0.05742307266078091 0.9438714419765777 ['ENST00000498004.5_1_X:15768244-15782785:+|nuORF'] 23146 7471 EVNGEVFQ True H1975_Epitope_Rep3 920.4239612655999 920.42286993586 33.716 2 -0.23691697447755197 0.05742307266078091 0.9438714419765777 ['ENSG00000145725|ENST00000358359|PPIP5K2', 'nc|ENSG00000145725|O43314-2|PPIP5K2'] 57387 6859 LEHNQVQL True PC9_epitope_Rep2 979.50869394907 979.50758993586 31.786 2 -0.23697859287866982 0.05742307266078091 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 125999 10216 VPAGGAVAVSA True PC9_epitope_Rep5 897.4919812557699 897.4914349679301 44.284 1 -0.23700024265355601 0.05742307266078091 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 52675 7465 KQFQFGHAL True NCI_RA007_Epitope_Rep3 1074.5610638750998 1074.5599699358602 36.483 2 -0.23701276803619675 0.05744048168738341 0.9438714419765777 ['ENSG00000018510|ENST00000264167|AGPS'] 33926 22163 GMLDGLVNV True PC9_epitope_Rep2 916.4688032830401 916.4682549679301 90.737 1 -0.23703029068319778 0.05747211346679471 0.9438714419765777 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-3|DNAJC10'] 130136 4736 VTRLESLL True NCI_RA007_Epitope_Rep3 929.55458151233 929.55348993586 25.58 2 -0.2370452783255059 0.05747211346679471 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1', 'ENST00000569733.6_1_16:67575293-67580037:+|nuORF', 'ENST00000564616.1_1_16:67576996-67577373:+|nuORF'] 109478 8849 TGVVESEEMMP True H1975_Epitope_Rep3 1207.51007604167 1207.50896993586 39.043 2 -0.2370549348332807 0.05747211346679471 0.9438714419765777 ['ENSG00000221843|ENST00000447166|C2orf16'] 64800 9994 LRWEKRWCDLR True NCI_RA007_Epitope_Rep1 1559.8143355189898 1559.81269490379 42.88 3 -0.2370568847272619 0.05747211346679471 0.9438714419765777 ['nc|ENSG00000147481|Q9NSN8-2|SNTG1', 'ENSG00000147481|ENST00000642720|SNTG1'] 94264 6616 RWRRRRPWLDP True NCI_RA007_Epitope_Rep2 1592.8912804000797 1592.8896449037902 30.344 3 -0.23710304482663672 0.05747211346679471 0.9438714419765777 ['ENSG00000204231|ENST00000374680|RXRB', 'nc|ENSG00000204231|P28702-3|RXRB'] 77958 10518 PALALAAT True PC9_epitope_Rep6 726.4275900940601 726.4270449679301 51.246 1 -0.23718448054791327 0.05750798722044728 0.9438714419765777 ['ENST00000551489.5_1_12:107349705-107350883:+|nuORF'] 126610 13424 VPPPPTPPP True PC9_epitope_Rep5 897.4960040070499 897.49490993586 56.651 2 -0.23722222690515696 0.05752008124826886 0.9438714419765777 ['ENSG00000136367|ENST00000419474|ZFHX2'] 108577 5471 TEHWWHVRREP True H1975_Epitope_Rep1 1531.74327875371 1531.74163490379 26.105 3 -0.23723158971972028 0.05752008124826886 0.9438714419765777 ['ARHGAP27|p.S567Lfs*9|1|0.15|ENSG00000159314|chr17:45402757-45402758|GA/-|frameshift_variant', 'nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27', 'ENSG00000159314|ENST00000685559|ARHGAP27', 'nc|ENSG00000159314|Q6ZUM4-4|ARHGAP27', 'ENST00000531735.5_1_17:43481393-43507645:-|nuORF'] 21983 7832 ESLTDTQL True NCI_RA007_Epitope_Rep3 905.43419159613 905.43364496793 37.929 1 -0.23726204925519517 0.05752008124826886 0.9438714419765777 ['ENSG00000113615|ENST00000398844|SEC24A'] 38644 18379 HHLVIPSVL True PC9_epitope_Rep5 1013.6022004110899 1013.60110993586 75.713 2 -0.23726211353149373 0.05752008124826886 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19'] 115267 17200 TVDKQNISL True PC9_epitope_Rep3 1016.5502244078799 1016.54912993586 71.316 2 -0.23728037398536708 0.05752008124826886 0.9438714419765777 ['ENSG00000116031|ENST00000410009|CD207'] 132510 7115 VYPERSTSY True PC9_epitope_Rep5 1100.51383889916 1100.51274993586 32.335 2 -0.2372836956488291 0.05752008124826886 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 60526 23341 LIPEYLNFI True PC9_epitope_Rep2 1120.61684741572 1120.61627496793 95.256 1 -0.2373119475940309 0.057537484304601524 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF', 'ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 495 5422 AAPAEEPAAAA True PC9_epitope_Rep6 967.4610750503098 967.45996993586 28.766 2 -0.2373640344793453 0.05755063606654234 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 89156 7233 REHGIRLLEA True NCI_RA007_Epitope_Rep4 1192.66765420196 1192.66600490379 34.456 3 -0.23756301037403063 0.05755063606654234 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant', 'ENSG00000261150|ENST00000615648|EPPK1'] 84956 9401 QIASGLAY True H1975_Epitope_Rep2 821.42831837005 821.4277649679301 41.125 1 -0.23758613149698063 0.05755063606654234 0.9438714419765777 ['ENSG00000154237|ENST00000388948|LRRK1', 'ENST00000525284.5_1_15:101565016-101602660:+|nuORF'] 123837 17305 VIVPLYDTL True NCI_RA007_Epitope_Rep4 1031.5902983147098 1031.58977496793 74.935 1 -0.23760564017917662 0.05755063606654234 0.9438714419765777 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1'] 99359 14922 SLDTENIDEIL True PC9_epitope_Rep3 1260.60852712964 1260.6074299358602 62.532 2 -0.23767528173182725 0.05755063606654234 0.9438714419765777 ['ENSG00000023318|ENST00000262455|ERP44'] 18013 7952 EIIAKQGG True NCI_RA007_Epitope_Rep2 814.45486747106 814.45376993586 35.564 2 -0.23771023454926782 0.05758224716611897 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 94203 13744 RWNRRHKMYRE True NCI_RA007_Epitope_Rep4 1630.8375305750599 1630.83642993586 60.092 2 -0.23774285606287698 0.05758224716611897 0.9438714419765777 ['ENSG00000108950|ENST00000592554|FAM20A'] 84963 12253 QIDGDFEDY True H1975_Epitope_Rep2 1100.42983449168 1100.42927496793 52.213 1 -0.23775455570881152 0.05758224716611897 0.9438714419765777 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 118171 8819 VAVSGKGF True PC9_epitope_Rep2 763.4228390667898 763.42174993586 39.274 2 -0.23783991813694066 0.05758224716611897 0.9438714419765777 ['nc|ENSG00000165409|P16473-3|TSHR'] 109963 7025 THSLLDSP True PC9_epitope_Rep5 868.42904664604 868.4279499358599 31.991 2 -0.2378597903316209 0.05758224716611897 0.9438714419765777 ['ENST00000512959.1_1_4:55595508-55599400:+|nuORF'] 12066 5827 DIEKLRKREQK True NCI_RA007_Epitope_Rep1 1441.83651043221 1441.83487490379 26.719 3 -0.23802309096888136 0.05765502981520114 0.9438714419765777 ['ENST00000566703.1_1_16:30776326-30777900:+|nuORF', 'nc|ENSG00000103549|O75150-3|RNF40', 'ENST00000493683.5_1_16:30773821-30780773:+|nuORF', 'ENSG00000103549|ENST00000324685|RNF40', 'nc|ENSG00000103549|O75150-4|RNF40'] 6460 18326 APTAAQVLI True PC9_epitope_Rep6 882.5174677276199 882.51636993586 83.134 2 -0.23807366788031878 0.057672426524885544 0.9438714419765777 ['ENSG00000131067|ENST00000336431|GGT7'] 24466 17477 FAIDPHLLL True NCI_RA007_Epitope_Rep1 1037.59096702105 1037.5898699358602 72.115 2 -0.23818858054283562 0.05772567841978955 0.9438714419765777 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A'] 126925 8684 VPVDTGVAA True PC9_epitope_Rep6 827.4388830537498 827.43833496793 43.252 1 -0.2382061097505024 0.05772567841978955 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 133280 4132 WEKREREKDEK True NCI_RA007_Epitope_Rep5 1531.7743040984699 1531.77209987172 22.391 4 -0.23825468110248732 0.05774307286186336 0.9438714419765777 ['ENSG00000154479|ENST00000447353|CFAP210'] 18256 12968 EISQELLY True H1975_Epitope_Rep1 993.50187723313 993.50078993586 54.958 2 -0.23827669090575318 0.0577583342562853 0.9438714419765777 ['ENSG00000134698|ENST00000373210|AGO4'] 106764 20278 SYFPEITHI True PC9_epitope_Rep1 1105.54441075145 1105.5433099358602 82.826 2 -0.2383028696022464 0.0577583342562853 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 20298 5545 EPCFSLGCHNK True NCI_RA007_Epitope_Rep2 1233.52706351849 1233.52596993586 26.185 2 -0.2383128627566971 0.0577583342562853 0.9438714419765777 ['ENST00000581709.1_1_18:67758841-67776916:-|nuORF'] 58503 20804 LEYWMEDIYTP True PC9_epitope_Rep2 1458.6377190829398 1458.6366299358601 85.464 2 -0.23833747082524018 0.05777359396053676 0.9438714419765777 ['ENSG00000169330|ENST00000305428|MINAR1', 'ENST00000559272.1_1_15:79756054-79760723:+|nuORF'] 81469 4865 PQNQTIESP True H1975_Epitope_Rep2 1012.48253877088 1012.48144993586 23.801 2 -0.23836030703206457 0.05777359396053676 0.9438714419765777 ['ENST00000371206.6_1_10:97583001-97605437:+|nuORF', 'nc|ENSG00000138185|P49961-3|ENTPD1', 'nc|ENSG00000138185|P49961-4|ENTPD1', 'nc|ENSG00000138185|P49961-5|ENTPD1', 'ENSG00000138185|ENST00000371205|ENTPD1', 'nc|ENSG00000138185|P49961-2|ENTPD1', 'nc|ENSG00000138185|P49961-6|ENTPD1', 'ENST00000422161.2_1_10:97604371-97605854:+|nuORF'] 66093 15257 LSNNQLSYL True PC9_epitope_Rep3 1050.53457434374 1050.53346993586 63.834 2 -0.23836704066334308 0.05777359396053676 0.9438714419765777 ['nc|ENSG00000132000|Q6PEZ8-3|PODNL1', 'nc|ENSG00000132000|Q6PEZ8|PODNL1', 'ENSG00000132000|ENST00000588872|PODNL1'] 27825 9389 FQINIFRE True NCI_RA007_Epitope_Rep4 1065.56072952193 1065.5596299358601 42.968 2 -0.23839486491655354 0.05780944294732179 0.9438714419765777 ['ENST00000556615.5_2_14:37716322-37716418:+|nuORF'] 62140 23382 LLPECFYSF True PC9_epitope_Rep1 1117.5154191222898 1117.5143299358601 94.72 2 -0.2384270118466106 0.0578268332748851 0.9438714419765777 ['nc|ENSG00000104413|Q6NXG1-2|ESRP1', 'nc|ENSG00000104413|Q6NXG1-5|ESRP1', 'nc|ENSG00000104413|Q6NXG1-4|ESRP1', 'nc|ENSG00000104413|Q6NXG1-3|ESRP1', 'ENSG00000104413|ENST00000433389|ESRP1', 'ENST00000522920.1_1_8:95655542-95658518:+|nuORF'] 131493 10097 VVVATIKSV True PC9_epitope_Rep4 914.5800679841799 914.57896993586 46.509 2 -0.2385006613517677 0.05791805094130675 0.9438714419765777 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1', 'nc|ENSG00000080815|P49768-6|PSEN1', 'nc|ENSG00000080815|P49768-7|PSEN1', 'nc|ENSG00000080815|P49768-2|PSEN1', 'ENSG00000080815|ENST00000324501|PSEN1', 'nc|ENSG00000080815|P49768-4|PSEN1', 'nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 6491 10491 APTLPGSAA True PC9_epitope_Rep1 783.41266830591 783.41156993586 45.243 2 -0.23852574968754614 0.05793330011258144 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 125117 17950 VLPKLYVKL True PC9_epitope_Rep3 1071.7056028504699 1071.7045099358602 74.25 2 -0.23855328827114028 0.05793330011258144 0.9438714419765777 ['ENST00000465478.1_1_8:93156318-93156576:-|nuORF', 'nc|ENSG00000196933|Q5JNZ5|RPS26P11', 'ENSG00000197728|ENST00000646449|RPS26', 'ENST00000471178.2_1_19:35024355-35024547:-|nuORF', 'ENST00000444468.1_1_X:128542382-128542532:+|nuORF'] 42282 15746 IEIPSVVSV True H1975_Epitope_Rep3 941.54334812229 941.54279496793 66.01 1 -0.23855376463143957 0.05793330011258144 0.9438714419765777 ['ZBTB20|p.T272Rfs*23|1|0.1|ENSG00000181722|chr3:114351265-114351266|-/TCGT|frameshift_variant', 'nc|ENSG00000181722|Q9HC78-2|ZBTB20', 'ZBTB20|p.A693Cfs*33|1|0.16|ENSG00000181722|chr3:114339155-114339156|-/G|frameshift_variant', 'ZBTB20|p.P692Lfs*43|1|0.38|ENSG00000181722|chr3:114339156-114339156|G/-|frameshift_variant', 'ENSG00000181722|ENST00000675478|ZBTB20'] 29083 20088 FTQDSNYLL True PC9_epitope_Rep5 1099.51858992643 1099.51807496793 82.319 1 -0.23857511321996985 0.057969142182194004 0.9438714419765777 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 102200 6165 SPSLVQGR True PC9_epitope_Rep3 842.4610154806599 842.45990993586 28.757 2 -0.23861595355674156 0.058000701249331044 0.9438714419765777 ['CHRM2|p.K242N|1|0.22|ENSG00000181072|chr7:137015591-137015591|G/T|missense_variant', 'ENSG00000181072|ENST00000680005|CHRM2'] 41837 9830 IDSYLRRELIY True H1975_Epitope_Rep1 1439.77726422059 1439.77616993586 42.74 2 -0.23862007715691555 0.058000701249331044 0.9438714419765777 ['ENSG00000186854|ENST00000409520|TRABD2A', 'nc|ENSG00000186854|Q86V40-2|TRABD2A', 'ENST00000460991.1_1_2:85066267-85069119:-|nuORF'] 4710 6041 ALDSSRLVP True NCI_RA007_Epitope_Rep5 956.52909504048 956.52798993586 29.918 2 -0.2386782790005675 0.058000701249331044 0.9438714419765777 ['ENSG00000186451|ENST00000334325|SPATA12'] 115233 11446 TVDALFGK True H1975_Epitope_Rep1 849.45961849833 849.4590749679301 49.007 1 -0.23868175170792974 0.058000701249331044 0.9438714419765777 ['nc|ENSG00000160310|P55345-5|PRMT2'] 20109 17521 ENKFDFSV True PC9_epitope_Rep5 984.4552613938799 984.45416993586 72.399 2 -0.23872545681522714 0.058000701249331044 0.9438714419765777 ['ENSG00000174606|ENST00000366962|ANGEL2', 'ENST00000460337.5_1_1:213180435-213186753:-|nuORF'] 98610 12511 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.55090993586 53.164 2 -0.23883283707843458 0.058031183688532155 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 100583 11754 SLQEEWIPFRR True NCI_RA007_Epitope_Rep1 1459.7571974823497 1459.7561099358602 49.698 2 -0.23883804593308516 0.058031183688532155 0.9438714419765777 ['ENSG00000158006|ENST00000374282|PAFAH2'] 41347 20779 IALSLPSPE True PC9_epitope_Rep1 925.51204799401 925.51094993586 84.756 2 -0.23884055440850877 0.058031183688532155 0.9438714419765777 ['nc|ENSG00000155846|Q86YN6-6|PPARGC1B', 'nc|ENSG00000155846|Q86YN6-5|PPARGC1B', 'nc|ENSG00000155846|Q86YN6-4|PPARGC1B', 'nc|ENSG00000155846|Q86YN6-2|PPARGC1B', 'nc|ENSG00000155846|Q86YN6-3|PPARGC1B', 'ENSG00000155846|ENST00000309241|PPARGC1B'] 2793 5261 AEVDVRTHSIK True NCI_RA007_Epitope_Rep1 1253.67279915205 1253.67115490379 24.547 3 -0.2388625838518869 0.058031183688532155 0.9438714419765777 ['ENST00000607947.1_1_20:1340372-1341782:+|nuORF'] 123724 8573 VIQNNLKYP True NCI_RA007_Epitope_Rep1 1087.6025943339098 1087.6014899358602 37.349 2 -0.23893469657750158 0.058031183688532155 0.9438714419765777 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2', 'ENST00000556686.1_1_14:52473253-52474606:-|nuORF'] 110677 10397 TIWTQQSQGGP True PC9_epitope_Rep2 1201.5727507576098 1201.57111490379 45.314 3 -0.23894053977708743 0.058031183688532155 0.9438714419765777 ['ENST00000464023.1_1_22:24177016-24178512:-|nuORF', 'ENST00000404056.1_1_22:24177016-24177280:-|nuORF', 'nc|ENSG00000099958|Q96Q80-2|DERL3'] 135352 6371 YDEKKTYD True NCI_RA007_Epitope_Rep5 1060.47130538084 1060.47020993586 31.18 2 -0.23901972244705072 0.05806594460948023 0.9438714419765777 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2', 'SECISBP2|p.L254Kfs*14|1|0.29|ENSG00000187742|chr9:89328841-89328845|TTCTC/-|frameshift_variant'] 116880 19390 TYNSNLFFW True NCI_RA007_Epitope_Rep3 1190.53965972418 1190.53856993586 84.624 2 -0.23907227884204943 0.05806594460948023 0.9438714419765777 ['ENSG00000106066|ENST00000265394|CPVL', 'CPVL|p.N81S|2|0.14|ENSG00000106066|chr7:29112750-29112750|T/C|missense_variant'] 136783 21100 YIRRVHNL True PC9_epitope_Rep5 1069.61449643029 1069.6133899358601 86.226 2 -0.2390956276996534 0.05808332410790066 0.9438714419765777 ['ENSG00000155561|ENST00000285968|NUP205'] 65346 3961 LSENEQNTIEK True NCI_RA007_Epitope_Rep2 1303.62557417611 1303.6239149037901 20.044 3 -0.23913775989206867 0.058099630996309964 0.9438714419765777 ['ENSG00000023516|ENST00000025301|AKAP11'] 23282 8950 EVRSSGLGL True PC9_epitope_Rep1 916.4977949121999 916.49668993586 39.269 2 -0.2391447622611477 0.058099630996309964 0.9438714419765777 ['chr11:57741926-57742117|103|22.89|0.0|21.13|+|0|None,SELENOH|1'] 58523 19052 LFAGKRAFSQK True PC9_epitope_Rep5 1251.7087907379498 1251.7076899358601 78.311 2 -0.23917990561682187 0.05811272022876118 0.9438714419765777 ['ENSG00000184949|ENST00000535113|FAM227A', 'nc|ENSG00000184949|F5H4B4-2|FAM227A'] 63253 16507 LPALAASP True PC9_epitope_Rep1 738.4275900940601 738.4270449679301 68.318 1 -0.23924603961961968 0.05811272022876118 0.9438714419765777 ['ENSG00000176678|ENST00000320241|FOXL1'] 15477 6792 EAQAELQKRDE True H1975_Epitope_Rep1 1315.63680756615 1315.6357099358602 31.17 2 -0.23927017575023726 0.05811272022876118 0.9438714419765777 ['DIAPH2|p.R928Lfs*20|1|0.47|ENSG00000147202|chrX:97247778-97247778|G/-|frameshift_variant', 'nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 67401 5809 LTEAAPPAPP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 27.335 2 -0.2393106399491293 0.05811272022876118 0.9438714419765777 ['ENSG00000188766|ENST00000691638|SPRED3'] 6496 8315 APTLSTSP True PC9_epitope_Rep1 772.3966838886 772.39558993586 36.818 2 -0.23931249703325344 0.05811272022876118 0.9438714419765777 ['ENSG00000106771|ENST00000374586|TMEM245', 'nc|ENSG00000106771|Q9H330-4|TMEM245'] 18599 8447 ELAERQQK True NCI_RA007_Epitope_Rep2 1000.5301576696401 1000.52906993586 37.499 2 -0.23935597223332966 0.05812795159386069 0.9438714419765777 ['nc|ENSG00000100206|Q14565-2|DMC1', 'ENSG00000100206|ENST00000216024|DMC1'] 73493 11538 NEYLNKCFY True H1975_Epitope_Rep3 1192.52229540788 1192.52118993586 49.506 2 -0.23942197730695866 0.05812795159386069 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000492174.1_1_9:138741977-138754403:-|nuORF'] 33712 20547 GLQSLIGDI True PC9_epitope_Rep5 914.50729696674 914.50618993586 84.078 2 -0.23942798418677683 0.05812795159386069 0.9438714419765777 ['ENSG00000088298|ENST00000374492|EDEM2', 'nc|ENSG00000088298|Q9BV94-2|EDEM2'] 5785 9561 APFAAHGYGA True PC9_epitope_Rep1 960.4453654165198 960.44426993586 41.634 2 -0.23943095238202572 0.058145326421811874 0.9438714419765777 ['ENSG00000126067|ENST00000373237|PSMB2'] 139801 16737 YVDDGLISL True NCI_RA007_Epitope_Rep1 993.5018772331299 993.50132496793 69.228 1 -0.23945129568351517 0.05817685468698122 0.9438714419765777 ['ENSG00000067225|ENST00000335181|PKM', 'nc|ENSG00000067225|P14618-3|PKM', 'ENST00000562784.1_1_15:72501984-72509791:-|nuORF', 'nc|ENSG00000067225|P14618-2|PKM'] 63989 20249 LQAPPLTSL True PC9_epitope_Rep2 938.5436824754601 938.5431349679301 83.308 1 -0.23955171618327115 0.05817685468698122 0.9438714419765777 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 69700 19267 LVYMEIESL True PC9_epitope_Rep3 1095.55219855383 1095.55110993586 79.333 2 -0.23956499954339838 0.05817685468698122 0.9438714419765777 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 110429 19300 TINISLSL True PC9_epitope_Rep5 859.50148331031 859.50038993586 79.283 2 -0.23958466817543944 0.05817685468698122 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant', 'nc|ENSG00000123384|Q07954-2|LRP1'] 80715 20174 PLQQISVSL True PC9_epitope_Rep5 983.56514619603 983.56404993586 82.647 2 -0.23959137092561983 0.05817685468698122 0.9438714419765777 ['ENST00000607802.1_1_20:61640736-61711710:+|nuORF'] 45504 10711 ISERQAEVL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 52.011 2 -0.23962951989038905 0.05821052437427375 0.9438714419765777 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 82559 12208 PVGNPEIL True H1975_Epitope_Rep2 837.45961849833 837.45852993586 52.04 2 -0.2396325228747623 0.05821052437427375 0.9438714419765777 ['ENST00000575369.5_1_17:6662992-6674357:+|nuORF', 'nc|ENSG00000132530|Q6GPH4-6|XAF1', 'nc|ENSG00000132530|Q6GPH4-2|XAF1', 'nc|ENSG00000132530|Q6GPH4-7|XAF1', 'ENSG00000132530|ENST00000361842|XAF1'] 66265 13991 LSQDQYLVY True H1975_Epitope_Rep2 1127.5498900547097 1127.5487899358602 58.965 2 -0.23968637923149994 0.05821052437427375 0.9438714419765777 ['nc|ENSG00000211456|Q9NTJ5-2|SACM1L'] 16805 20344 EFLGAPVG True PC9_epitope_Rep3 788.4068546494799 788.40630496793 83.501 1 -0.2399063182622479 0.05828215201313193 0.9438714419765777 ['nc|ENSG00000123411|Q9H2S9-2|IKZF4', 'ENST00000551124.5_1_12:56418779-56429112:+|nuORF', 'ENSG00000123411|ENST00000547167|IKZF4'] 26294 11702 FIDITEVRW True H1975_Epitope_Rep3 1177.6131590176099 1177.61206993586 50.152 2 -0.24002388392918542 0.05828215201313193 0.9438714419765777 ['ENSG00000172244|ENST00000306862|C5orf34', 'ENST00000514462.1_1_5:43505848-43515051:-|nuORF'] 75263 6031 NPNQYHYVA True PC9_epitope_Rep4 1104.49885754136 1104.49776993586 30.181 2 -0.2400945949470737 0.0583353313291898 0.9438714419765777 ['ENSG00000139842|ENST00000375440|CUL4A', 'nc|ENSG00000139842|Q13619-2|CUL4A', 'ATP11A-CUL4A|1|fusion', 'ATP11A-CUL4A|2|fusion'] 35049 10279 GRDKSIVL True PC9_epitope_Rep5 886.5236157372199 886.52250993586 44.525 2 -0.24014599235184197 0.0583353313291898 0.9438714419765777 ['nc|ENSG00000138346|P51530-3|DNA2', 'nc|ENSG00000138346|P51530-4|DNA2', 'ENSG00000138346|ENST00000358410|DNA2'] 135161 10227 YARVVGSDAV True PC9_epitope_Rep4 1035.5349086969097 1035.53380993586 47.016 2 -0.2402495605902785 0.058389583563867066 0.9438714419765777 ['ENST00000478385.5_1_20:62340364-62366220:+|nuORF', 'ENSG00000197114|ENST00000355969|ZGPAT', 'nc|ENSG00000197114|Q8N5A5|ZGPAT'] 73047 13529 NDKLAEGF True PC9_epitope_Rep3 892.42904664604 892.4279499358599 57.091 2 -0.24028414034101453 0.05840694908064843 0.9438714419765777 ['ENSG00000129988|ENST00000217407|LBP'] 100947 9475 SLSQNPSL True PC9_epitope_Rep6 844.42904664604 844.4279499358599 46.69 2 -0.24036056803586445 0.05842215911186516 0.9438714419765777 ['ENST00000595638.1_1_19:51485457-51485655:-|nuORF'] 26854 13035 FLETRKSWRK True PC9_epitope_Rep6 1349.7568035595298 1349.75515490379 61.725 3 -0.24036771190690678 0.05842215911186516 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 101752 5265 SPHLGPAPA True PC9_epitope_Rep6 845.4395517600899 845.43844993586 28.039 2 -0.24038110036218818 0.05842215911186516 0.9438714419765777 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant', 'IGF2R-SYTL3|1|fusion', 'IGF2R-SYTL3|2|fusion'] 140302 12681 YYDPHQATF True PC9_epitope_Rep3 1140.48762415132 1140.48652993586 53.802 2 -0.2404675443669838 0.05845796374499788 0.9438714419765777 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1', 'PCNX1|p.S602Vfs*6|1|0.21|ENSG00000100731|chr14:70978141-70978144|TCTA/-|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-2|PCNX1', 'ENST00000554879.5_1_14:71374480-71476401:+|nuORF'] 65842 9818 LSKPKANVSP True H1975_Epitope_Rep2 1039.6025943339098 1039.6014899358602 42.748 2 -0.24047447587064674 0.05847424809603718 0.9438714419765777 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'RALGAPA1|p.C1295Lfs*2|1|0.4|ENSG00000174373|chr14:35655901-35655902|-/A|frameshift_variant'] 127153 14617 VQEERKSYKV True NCI_RA007_Epitope_Rep2 1264.67755017932 1264.67644993586 61.523 2 -0.2405292221988309 0.05847424809603718 0.9438714419765777 ['NOS1|p.S1027Afs*23|2|0.22|ENSG00000089250|chr12:117234722-117234722|C/-|frameshift_variant', 'NOS1|p.P1042Lfs*8|1|0.25|ENSG00000089250|chr12:117234675-117234675|G/-|frameshift_variant', 'nc|ENSG00000089250|P29475-2|NOS1', 'ENSG00000089250|ENST00000317775|NOS1', 'nc|ENSG00000089250|P29475-3|NOS1'] 36586 12875 GVLGSQVIV True NCI_RA007_Epitope_Rep4 870.51746772762 870.51691496793 56.607 1 -0.24061905018686186 0.058507892019471895 0.9438714419765777 ['ENST00000374242.8_1_9:115478806-115480332:-|nuORF'] 95378 19014 SAIETLVTA True PC9_epitope_Rep5 903.49131254943 903.49020993586 78.163 2 -0.24064958207726656 0.058507892019471895 0.9438714419765777 ['nc|ENSG00000111605|Q16630-3|CPSF6', 'ENSG00000111605|ENST00000435070|CPSF6', 'nc|ENSG00000111605|Q16630-2|CPSF6'] 36668 13272 GVLSDLTK True H1975_Epitope_Rep1 831.47018318203 831.46908993586 56.151 2 -0.24066107507162307 0.058507892019471895 0.9438714419765777 ['nc|ENSG00000108219|Q8NG11-2|TSPAN14', 'ENSG00000108219|ENST00000429989|TSPAN14'] 94597 16075 RYKLYQEMF True PC9_epitope_Rep2 1276.6274291827597 1276.62577490379 67.089 3 -0.24082221831746678 0.05856213006840853 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 7690 5145 ASPPEQPP True NCI_RA007_Epitope_Rep5 821.3919328613299 821.39082993586 26.486 2 -0.24097115198949598 0.058595766649457925 0.9438714419765777 ['ENSG00000170234|ENST00000307063|PWWP2A', 'nc|ENSG00000170234|Q96N64-2|PWWP2A', 'nc|ENSG00000170234|Q96N64-3|PWWP2A'] 83886 5548 QEIEDYTASCS True H1975_Epitope_Rep3 1244.4866977448 1244.48560993586 26.386 2 -0.24098057604364567 0.058595766649457925 0.9438714419765777 ['ENST00000481551.5_1_7:92165699-92165855:+|nuORF'] 121679 16045 VGLLERLPQR True PC9_epitope_Rep1 1179.7087907379498 1179.70714490379 66.532 3 -0.241000481033024 0.058595766649457925 0.9438714419765777 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'ENST00000589085.5_1_19:5785216-5787684:-|nuORF'] 88961 3154 REDPDSVPP True H1975_Epitope_Rep1 1010.46688870674 1010.46578993586 16.044 2 -0.24108588550056106 0.0586283185840708 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1', 'ENST00000488788.2_1_20:629360-656142:-|nuORF'] 63096 18662 LNNAVSINL True PC9_epitope_Rep1 956.52909504048 956.52798993586 76.571 2 -0.24109438753930995 0.0586283185840708 0.9438714419765777 ['ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.V747Gfs*14|1|0.2|ENSG00000121871|chr3:165188591-165188592|-/C|frameshift_variant', 'SLITRK3|p.G109V|1|0.25|ENSG00000121871|chr3:165190505-165190505|C/A|missense_variant', 'SLITRK3|p.K136Efs*11|1|0.17|ENSG00000121871|chr3:165190410-165190425|TGAAGACATCTAGTTT/-|frameshift_variant'] 98929 10586 SIYGMFVIV True H1975_Epitope_Rep3 1027.5412399473098 1027.5401499358602 45.788 2 -0.24111884534057307 0.0586283185840708 0.9438714419765777 ['ENSG00000176893|ENST00000641926|OR51G2'] 129770 19651 VTKNQNIIL True PC9_epitope_Rep5 1041.61824439805 1041.6171499358602 80.644 2 -0.2411298297976599 0.0586283185840708 0.9438714419765777 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19', 'nc|ENSG00000176601|Q56UN5-7|MAP3K19', 'nc|ENSG00000176601|Q56UN5-4|MAP3K19', 'nc|ENSG00000176601|Q56UN5-5|MAP3K19'] 15305 12583 EAILLTRKDTP True NCI_RA007_Epitope_Rep1 1255.71360133487 1255.71250993586 52.925 2 -0.24120083947842166 0.0586641101749599 0.9438714419765777 ['nc|ENSG00000180953|Q9HBF5|ST20'] 25994 21940 FHCFFLGL True PC9_epitope_Rep2 982.4734947406598 982.47238993586 89.868 2 -0.24124431104846408 0.05868146454776741 0.9438714419765777 ['ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 48017 10925 KAKGMEPIEV True PC9_epitope_Rep3 1100.58998104488 1100.5888899358602 47.004 2 -0.2413035591270438 0.05869881828069981 0.9438714419765777 ['ENSG00000075643|ENST00000261326|MOCOS'] 116099 15617 TVSIPVWRRS True PC9_epitope_Rep1 1199.67749060967 1199.67638993586 64.89 2 -0.24137234448791242 0.05871508894829017 0.9438714419765777 ['ENST00000589203.5_2_18:14077183-14077513:-|nuORF'] 76889 15234 NVKEMWTEV True PC9_epitope_Rep4 1134.53794547202 1134.5368499358601 66.526 2 -0.24138459989693598 0.05871508894829017 0.9438714419765777 ['nc|ENSG00000125743|P62316-2|SNRPD2', 'ENSG00000125743|ENST00000342669|SNRPD2'] 6047 23195 APLVTLEVL True PC9_epitope_Rep3 953.57973363101 953.57862993586 94.489 2 -0.2415253522338624 0.05876931017955241 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 114709 15651 TSTDFLYF True H1975_Epitope_Rep2 992.4491133842799 992.4485649679301 65.359 1 -0.2416373845381831 0.058786661013512265 0.9438714419765777 ['ENST00000391835.1_1_19:50380125-50380224:-|nuORF'] 126957 9232 VPVQPGSSV True PC9_epitope_Rep3 868.4654321547599 868.46432993586 40.452 2 -0.24165949884317248 0.058804011207786465 0.9438714419765777 ['nc|ENSG00000149476|Q3LXA3-2|TKFC', 'ENSG00000149476|ENST00000394900|TKFC', 'ENST00000524953.1_1_11:61110045-61110363:+|nuORF'] 112653 11429 TPFEKGLHVV True PC9_epitope_Rep4 1125.61824439805 1125.6166049037902 51.729 3 -0.24177110282738143 0.05881919227295349 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 111107 10948 TLEIPEVL True PC9_epitope_Rep1 912.5167990212799 912.51570993586 47.001 2 -0.2417946253229634 0.05881919227295349 0.9438714419765777 ['nc|ENSG00000224287|P0C860|MSL3B'] 135944 10938 YEYARRRFTER True H1975_Epitope_Rep1 1545.7800581852496 1545.77896993586 47.037 2 -0.2418145122955235 0.05881919227295349 0.9438714419765777 ['ENST00000463900.5_1_2:74753929-74756164:-|nuORF', 'ENSG00000115307|ENST00000377526|AUP1'] 111119 8505 TLELQKQIM[Oxidation]S True NCI_RA007_Epitope_Rep2 1205.63257451329 1205.6314699358602 37.725 2 -0.2418891334932158 0.05883328725463091 0.9438714419765777 ['ENST00000560591.5_1_15:67835673-67951132:+|nuORF', 'nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 68949 5909 LVFRNGDA True PC9_epitope_Rep6 890.4610154806599 890.45990993586 30.997 2 -0.24191330297734634 0.05883328725463091 0.9438714419765777 ['ENSG00000183066|ENST00000328823|WBP2NL'] 57141 14167 LEEQLTTDEIL True PC9_epitope_Rep6 1302.6554773220598 1302.65438993586 66.365 2 -0.24202232355759282 0.05883328725463091 0.9438714419765777 ['nc|ENSG00000105607|Q92947-2|GCDH', 'ENSG00000105607|ENST00000222214|GCDH', 'ENST00000590627.5_1_19:13002616-13004571:+|nuORF', 'ENST00000585420.5_1_19:13002616-13007066:+|nuORF', 'ENST00000587832.5_1_19:13002118-13004571:+|nuORF', 'ENST00000421816.6_1_19:13002118-13008243:+|nuORF', 'ENST00000591043.1_1_19:13002118-13008243:+|nuORF', 'GCDH|p.Q167Sfs*57|1|0.36|ENSG00000105607|chr19:12893644-12893644|C/-|frameshift_variant'] 100155 9553 SLLDVSFCSQ True H1975_Epitope_Rep1 1097.50631099057 1097.5052099358602 41.67 2 -0.24202814714762602 0.05883328725463091 0.9438714419765777 ['ENSG00000112234|ENST00000369244|FBXL4'] 105612 15364 SVENKIVSL True PC9_epitope_Rep3 987.56006081559 987.55896993586 64.255 2 -0.24203538829917734 0.058850634031259216 0.9438714419765777 ['ENST00000494463.1_1_1:160606951-160616738:-|nuORF', 'nc|ENSG00000117090|Q13291-2|SLAMF1', 'nc|ENSG00000117090|Q13291-3|SLAMF1', 'ENSG00000117090|ENST00000302035|SLAMF1', 'nc|ENSG00000117090|Q13291-4|SLAMF1'] 167 14366 AADWHNLIL True NCI_RA007_Epitope_Rep3 1051.54507945779 1051.54398993586 63.819 2 -0.24205757368628247 0.058867980168457526 0.9438714419765777 ['ENST00000558523.1_1_14:102821996-102829188:-|nuORF', 'nc|ENSG00000100865|Q9BW66-2|CINP', 'ENST00000561468.5_1_14:102816372-102829233:-|nuORF', 'ENSG00000100865|ENST00000216756|CINP', 'nc|ENSG00000100865|Q9BW66-3|CINP'] 107492 8534 TAAHGLEL True PC9_epitope_Rep4 810.42356734278 810.42246993586 40.303 2 -0.24209749212602372 0.058879899747525936 0.9438714419765777 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 83511 9630 QDIWYHEDRIR True NCI_RA007_Epitope_Rep1 1529.73752466693 1529.73642993586 41.458 2 -0.24212831339367843 0.058879899747525936 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23', 'ENST00000579768.1_1_17:55926599-55927356:-|nuORF'] 18915 8173 ELERFNKLV True H1975_Epitope_Rep2 1146.63970811862 1146.6386099358601 36.389 2 -0.24215525982555505 0.058879899747525936 0.9438714419765777 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 47775 10324 IYQRDPLKL True PC9_epitope_Rep4 1144.6604435631998 1144.65880490379 47.401 3 -0.24219108552232985 0.058879899747525936 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 93307 20625 RRRYLRRKER True NCI_RA007_Epitope_Rep5 1487.9021794369498 1487.90053490379 86.276 3 -0.24225679763501395 0.058879899747525936 0.9438714419765777 ['ENSG00000284188|ENST00000640271|unknown'] 100036 12067 SLKKEFESV True PC9_epitope_Rep6 1065.57062549929 1065.5695299358601 57.732 2 -0.24228059669543633 0.058879899747525936 0.9438714419765777 ['nc|ENSG00000101190|Q9UL49-1|TCFL5', 'TCFL5|p.D480Tfs*4|1|0.15|ENSG00000101190|chr20:62842040-62842040|C/-|frameshift_variant', 'ENSG00000101190|ENST00000335351|TCFL5', 'nc|ENSG00000101190|Q9UL49-2|TCFL5'] 67404 5993 LTEAAPPAPP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 28.065 2 -0.24240223816201945 0.05898721114510006 0.9438714419765777 ['ENSG00000188766|ENST00000691638|SPRED3'] 85401 15360 QLEGLNWL True PC9_epitope_Rep5 971.5076313199099 971.50652993586 64.092 2 -0.24241073528186416 0.05898721114510006 0.9438714419765777 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000173575|O14647-3|CHD2', 'CHD3|p.R748L|1|0.52|ENSG00000170004|chr17:7899102-7899102|G/T|missense_variant', 'nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'CHD9|p.W1426Mfs*3|1|0.15|ENSG00000177200|chr16:53263047-53263048|-/A|frameshift_variant', 'ENSG00000116254|ENST00000262450|CHD5'] 106393 14843 SVSVYQSL True PC9_epitope_Rep6 881.4494477374501 881.44834993586 69.066 2 -0.24241900473488806 0.05898721114510006 0.9438714419765777 ['TRIM59|p.L369V|1|0.13|ENSG00000213186|chr3:160438079-160438079|G/C|missense_variant'] 22569 7607 ETMSLADSLY True H1975_Epitope_Rep2 1128.50089125696 1128.49978993586 34.213 2 -0.24248613228593144 0.05902297897433063 0.9438714419765777 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'CAMSAP2-CARS|1|fusion', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 15495 6049 EAQLDSEDP True H1975_Epitope_Rep2 1002.4141844275399 1002.41308993586 28.245 2 -0.24254299426649434 0.059056569006817765 0.9438714419765777 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138771|ENST00000296043|SHROOM3'] 92085 6855 RPSTDFTQA True PC9_epitope_Rep1 1021.4828731240499 1021.48176993586 31.172 2 -0.24256310084171528 0.059056569006817765 0.9438714419765777 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 47857 12783 IYTHQSDVW True PC9_epitope_Rep1 1147.5298233164701 1147.5287299358602 54.045 2 -0.24256704157036263 0.059056569006817765 0.9438714419765777 ['nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'BAG4-FGFR1|1|fusion', 'BAG4-FGFR1|2|fusion', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-3|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion', 'ENSG00000146648|ENST00000275493|EGFR'] 55515 14613 LAVVAGVAAE True PC9_epitope_Rep6 898.5123823471799 898.51128993586 68.119 2 -0.2426012218039782 0.05907390687475816 0.9438714419765777 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 36104 10101 GVEIC[Carbamidomethyl]IATPGR True NCI_RA007_Epitope_Rep2 1171.6019429903397 1171.6008499358602 43.879 2 -0.24279279085630467 0.0590825350036846 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 95273 12046 SADRGLVL True PC9_epitope_Rep5 829.46576650793 829.46466993586 51.329 2 -0.24279357975680993 0.0590825350036846 0.9438714419765777 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-7|FCAR'] 91573 6634 RPAPPAQSL True PC9_epitope_Rep3 935.5188647099499 935.51776993586 30.54 2 -0.2428014003652848 0.0590825350036846 0.9438714419765777 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 57727 5981 LENLSTASS True H1975_Epitope_Rep2 920.4450906330001 920.44454496793 27.985 1 -0.24280909682728521 0.0590825350036846 0.9438714419765777 ['nc|ENSG00000075391|Q9UJF2|RASAL2', 'ENSG00000075391|ENST00000367649|RASAL2'] 60717 18516 LIYRKLLP True PC9_epitope_Rep6 1014.6589870112199 1014.65788993586 83.863 2 -0.24280995583099602 0.0590825350036846 0.9438714419765777 ['chr8:40114873-40125442|125|21.34|0.21|6.66|+|0|TE_info:MLT2F,MLT2F_dup974,ERVL,LTR,acceptor,+,40125442,40125720|LINC02866,None|3'] 32878 12283 GILKNGLI True PC9_epitope_Rep5 826.5276384884999 826.52654993586 52.235 2 -0.24286382269785906 0.0590825350036846 0.9438714419765777 ['nc|ENSG00000062194|Q86WP2-4|GPBP1', 'nc|ENSG00000062194|Q86WP2-3|GPBP1', 'ENSG00000062194|ENST00000506184|GPBP1', 'nc|ENSG00000062194|Q86WP2-2|GPBP1'] 132160 8494 VYISEHEHF True PC9_epitope_Rep4 1159.5298233164701 1159.5281849037901 40.145 3 -0.24291866528982117 0.0590825350036846 0.9438714419765777 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1'] 59498 21791 LGPKVLLFL True PC9_epitope_Rep2 998.6528390016199 998.65174993586 89.29 2 -0.24293896317559568 0.0590825350036846 0.9438714419765777 ['ENST00000538107.5_1_12:8804361-8814700:-|nuORF', 'MFAP5|p.N79Kfs*9|1|0.33|ENSG00000197614|chr12:8651672-8651673|-/T|frameshift_variant', 'ENST00000537128.1_1_12:8806991-8814700:-|nuORF', 'ENST00000534833.5_1_12:8803096-8814700:-|nuORF', 'nc|ENSG00000197614|Q13361-2|MFAP5', 'ENSG00000197614|ENST00000359478|MFAP5'] 119041 20103 VEGLQGVYV True PC9_epitope_Rep3 962.5072969667398 962.50618993586 82.578 2 -0.2429641661945478 0.0590825350036846 0.9438714419765777 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000496420.5_1_7:92123531-92130970:-|nuORF'] 88789 7810 RDQEEERRERW True NCI_RA007_Epitope_Rep3 1587.7502146089496 1587.7491099358601 37.84 2 -0.24305147017703935 0.05913126773016984 0.9438714419765777 ['ENSG00000159450|ENST00000614923|TCHH'] 61374 14788 LLEKELESV True PC9_epitope_Rep4 1058.58594121026 1058.5848499358601 64.818 2 -0.24306463340404724 0.05913126773016984 0.9438714419765777 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000467099.6_1_17:18003545-18010551:+|nuORF'] 131249 15495 VVQAVIEQ True PC9_epitope_Rep4 884.4967322830398 884.49562993586 67.527 2 -0.24309310934312875 0.05913126773016984 0.9438714419765777 ['ENST00000471757.5_1_2:96691131-96693504:-|nuORF', 'nc|ENSG00000186281|Q6NUI2-3|GPAT2', 'ENST00000486463.5_1_2:96687909-96693504:-|nuORF', 'ENST00000484440.5_1_2:96688852-96698107:-|nuORF', 'nc|ENSG00000186281|Q6NUI2|GPAT2', 'ENSG00000186281|ENST00000434632|GPAT2'] 55375 16873 LASPLALL True H1975_Epitope_Rep1 796.50584041476 796.50529496793 70.313 1 -0.24313127957285105 0.05913126773016984 0.9438714419765777 ['Tigger1_dup324|chr1:83019440-83021751:-|3.250534866687885|0.2214501882032552|3.88|499.0|158|3|anti-sense'] 26387 8482 FIIPQNMNP True NCI_RA007_Epitope_Rep3 1072.5375515492 1072.5364499358602 40.44 2 -0.24313246033902106 0.05913126773016984 0.9438714419765777 ['ENSG00000196597|ENST00000481138|ZNF782'] 112240 6042 TLYEHNNEL True PC9_epitope_Rep5 1131.51965255559 1131.5179949037902 28.233 3 -0.24316199450072054 0.05913126773016984 0.9438714419765777 ['nc|ENSG00000094914|Q9NRG9-2|AAAS', 'ENSG00000094914|ENST00000209873|AAAS', 'AAAS|p.D37Rfs*50|1|0.11|ENSG00000094914|chr12:53321357-53321358|-/G|frameshift_variant', 'ENST00000548880.1_1_12:53709415-53715282:-|nuORF'] 88428 22443 QYSPLLAAF True PC9_epitope_Rep3 1008.5280324113198 1008.5274749679301 91.602 1 -0.24328212662563636 0.05918544034483394 0.9438714419765777 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1'] 38117 6368 HEPEPHIL True PC9_epitope_Rep6 970.4872302285 970.48612993586 33.073 2 -0.24332335980759917 0.059199498996150374 0.9438714419765777 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B', 'ENST00000449661.1_1_9:80834204-80834270:+|nuORF'] 81870 11441 PSKTIPGL True PC9_epitope_Rep5 811.4803539429099 811.47924993586 49.006 2 -0.2433279239843255 0.059199498996150374 0.9438714419765777 ['ENST00000399878.7_2_4:25750095-25759376:-|nuORF'] 130847 7176 VVGAPGGQSL True PC9_epitope_Rep2 883.4763311916299 883.4752299358599 32.994 2 -0.24337149686104442 0.059199498996150374 0.9438714419765777 ['ENSG00000139531|ENST00000266971|SUOX'] 67277 9496 LTDNRRSI True PC9_epitope_Rep5 973.53049202281 973.52938993586 41.482 2 -0.2433807020666837 0.059199498996150374 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant'] 17543 15639 EHIPESPYL True PC9_epitope_Rep5 1083.52367530687 1083.52256993586 65.166 2 -0.24344755820981998 0.05921682752523392 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 138645 27634 YRRQLRWKMLQ True PC9_epitope_Rep3 1576.8772701287196 1576.8761699358602 114.17 2 -0.2434937276499543 0.059251482668434816 0.9438714419765777 ['ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1', 'nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1'] 64970 12426 LSDDGSWTAY True H1975_Epitope_Rep3 1113.46146897313 1113.4608749679298 52.986 1 -0.24351788420255394 0.059251482668434816 0.9438714419765777 ['DTX2|p.H232Tfs*122|1|0.12|ENSG00000091073|chr7:76482925-76482926|-/C|frameshift_variant', 'nc|ENSG00000091073|Q86UW9-2|DTX2', 'ENSG00000091073|ENST00000430490|DTX2'] 37319 10383 GVVRGRPVTP True NCI_RA007_Epitope_Rep3 1036.6141620771198 1036.61306993586 47.899 2 -0.24357124523206303 0.059264443175749096 0.9438714419765777 ['ENST00000603791.1_1_6:3751774-3752740:+|nuORF'] 61083 7250 LLAWVRQPWD True NCI_RA007_Epitope_Rep2 1282.6822416369398 1282.68114993586 32.82 2 -0.24360226904561624 0.059264443175749096 0.9438714419765777 ['ENST00000486107.5_1_3:49946616-49946880:-|nuORF'] 44203 9280 ILSFPAIAL True NCI_RA007_Epitope_Rep4 943.5742543277498 943.57314993586 42.55 2 -0.2436204753945556 0.059264443175749096 0.9438714419765777 ['ENSG00000166073|ENST00000561100|GPR176', 'nc|ENSG00000166073|Q14439-3|GPR176', 'nc|ENSG00000166073|Q14439-2|GPR176'] 97809 12949 SHIGDAVVI True PC9_epitope_Rep2 909.49198125577 909.4914349679301 55.102 1 -0.24362267711141233 0.059264443175749096 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 68946 6589 LVFRNGDA True PC9_epitope_Rep2 890.4610154806599 890.45990993586 30.758 2 -0.24365479637906134 0.059264443175749096 0.9438714419765777 ['ENSG00000183066|ENST00000328823|WBP2NL'] 106212 17395 SVPNKDVFQEL True PC9_epitope_Rep2 1274.65066672514 1274.6495699358602 72.17 2 -0.24367315936008452 0.059281767955801104 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 133262 8269 WEERGDRRFEK True NCI_RA007_Epitope_Rep1 1506.7327736396599 1506.73111490379 36.164 3 -0.2437460119162961 0.05929909209775142 0.9438714419765777 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000463554.5_1_2:233599907-233635753:+|nuORF'] 108296 16156 TEDARTILEL True PC9_epitope_Rep2 1159.6084675599898 1159.60736993586 67.398 2 -0.24376365410164683 0.059315323278640225 0.9438714419765777 ['ENSG00000005189|ENST00000261377|REXO5', 'nc|ENSG00000005189|Q96IC2-2|REXO5'] 33472 9577 GLGPTTTLAI True NCI_RA007_Epitope_Rep4 942.53859709502 942.53750993586 43.682 2 -0.24377468089595983 0.059315323278640225 0.9438714419765777 ['SEC23A|p.S452G|1|0.55|ENSG00000100934|chr14:39063368-39063368|T/C|missense_variant'] 84393 15106 QGELDGFL True H1975_Epitope_Rep3 877.4181476091699 877.4175949679301 63.504 1 -0.2438636939698413 0.0593326458456099 0.9438714419765777 ['ENSG00000219626|ENST00000615575|FAM228B'] 109203 8709 TFTAYDTSRR True PC9_epitope_Rep3 1216.58364979448 1216.5820049037902 38.453 3 -0.24391746400398773 0.05934996777460639 0.9438714419765777 ['ENST00000304788.3_1_20:25596948-25597023:-|nuORF'] 56529 7619 LDVDNDRTTP True PC9_epitope_Rep1 1144.53603089572 1144.5349299358602 34.126 2 -0.24398962347103545 0.05938570323721136 0.9438714419765777 ['DLC1|p.V1401*|3|0.13|ENSG00000164741|chr8:13088579-13088579|T/-|frameshift_variant', 'ENSG00000164741|ENST00000276297|DLC1', 'nc|ENSG00000164741|Q96QB1-4|DLC1', 'nc|ENSG00000164741|Q96QB1-1|DLC1', 'nc|ENSG00000164741|Q96QB1-6|DLC1'] 9120 10292 AVLNEYLEQK True NCI_RA007_Epitope_Rep2 1205.62920300457 1205.62810993586 44.623 2 -0.24402373040828723 0.0594192491115653 0.9438714419765777 ['ENSG00000120280|ENST00000378962|TASL'] 126141 13544 VPFAAPATA True PC9_epitope_Rep4 843.4490538146299 843.44794993586 59.992 2 -0.24402992459468092 0.0594192491115653 0.9438714419765777 ['ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47'] 87412 4632 QTDRANRFEY True H1975_Epitope_Rep2 1298.6003624877799 1298.59870490379 22.917 3 -0.24403082482153882 0.0594192491115653 0.9438714419765777 ['ENSG00000153147|ENST00000283131|SMARCA5'] 108013 6367 TDAVEYARKR True NCI_RA007_Epitope_Rep1 1207.6309343400699 1207.62928490379 28.793 3 -0.2440685371573967 0.0594354734768279 0.9438714419765777 ['ENSG00000179097|ENST00000319595|HTR1F'] 34546 5945 GQEVNELKT True PC9_epitope_Rep5 1016.51383889916 1016.51274993586 27.862 2 -0.24407528565929132 0.0594354734768279 0.9438714419765777 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 32982 14890 GIVCTLCIP True H1975_Epitope_Rep2 917.4714461353299 917.47034993586 62.428 2 -0.2441661050153795 0.05945279128001178 0.9438714419765777 ['ENST00000285021.11_1_3:14193875-14197868:-|nuORF'] 73947 18725 NHLPSLVL True PC9_epitope_Rep1 891.51780208079 891.51670993586 76.815 2 -0.24419089771836708 0.05946901351401112 0.9438714419765777 ['nc|ENSG00000159873|Q8IWD4-2|CCDC117', 'nc|ENSG00000159873|Q8IWD4-4|CCDC117', 'nc|ENSG00000159873|Q8IWD4-3|CCDC117', 'ENSG00000159873|ENST00000249064|CCDC117'] 129000 19066 VSYLHMLQL True PC9_epitope_Rep5 1102.58450174162 1102.5834099358601 78.367 2 -0.24421649194667844 0.05946901351401112 0.9438714419765777 ['ENSG00000183111|ENST00000333677|ARHGEF37'] 74915 10896 NLSIFDPPP True PC9_epitope_Rep5 998.5072969667399 998.50618993586 46.899 2 -0.24424748546527736 0.059486329743164874 0.9438714419765777 ['nc|ENSG00000163600|Q9Y6W8-2|ICOS', 'ENSG00000163600|ENST00000316386|ICOS'] 99437 9566 SLEIKLNEY True H1975_Epitope_Rep2 1107.58119018299 1107.58008993586 41.771 2 -0.244407424257037 0.059502549846272804 0.9438714419765777 ['nc|ENSG00000046651|O75665-3|OFD1', 'ENSG00000046651|ENST00000340096|OFD1', 'nc|ENSG00000046651|O75665-2|OFD1', 'ENST00000490265.5_1_X:13753187-13770868:+|nuORF'] 106221 17949 SVPNKDVFQEL True PC9_epitope_Rep5 1274.65066672514 1274.6495699358602 74.057 2 -0.24443641575622724 0.059502549846272804 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 82624 8406 PVLEHPDCFP True H1975_Epitope_Rep1 1152.52738078832 1152.5262899358602 37.262 2 -0.24446124994993318 0.059518768754947625 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 36657 16057 GVLQLGNIVFK True NCI_RA007_Epitope_Rep2 1186.70739375562 1186.70628993586 67.177 2 -0.2444837348926335 0.059518768754947625 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 11167 11311 DEHKQQGELY True H1975_Epitope_Rep2 1245.56257999673 1245.5614899358602 48.555 2 -0.24455895933685157 0.059529507050031294 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2', 'ENST00000567980.5_1_16:81819579-81955027:+|nuORF', 'PLCG2|p.S821Ifs*21|1|0.26|ENSG00000197943|chr16:81927118-81927119|-/T|frameshift_variant'] 44688 19368 IPNIAPDI True PC9_epitope_Rep5 851.47526856247 851.47416993586 79.546 2 -0.24457980662852047 0.059529507050031294 0.9438714419765777 ['ZNF292-ORC3|2|fusion', 'ZNF292-ORC3|1|fusion', 'nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 78983 16520 PFKSPSIGF True PC9_epitope_Rep2 978.5174677276199 978.51636993586 68.785 2 -0.24460910881037712 0.059529507050031294 0.9438714419765777 ['ENST00000486283.1_1_7:129497270-129520783:-|nuORF', 'ENSG00000186591|ENST00000355621|UBE2H'] 32546 6863 GGTEPVVE True NCI_RA007_Epitope_Rep5 786.37594844402 786.3753949679301 33.081 1 -0.2446482494830813 0.059529507050031294 0.9438714419765777 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 69349 4035 LVQADEKEANV True H1975_Epitope_Rep3 1214.6142812164198 1214.6131899358602 20.651 2 -0.2446508660684843 0.059529507050031294 0.9438714419765777 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 100080 14149 SLKRRFYFKE True PC9_epitope_Rep3 1372.7615545868 1372.7599049037901 59.508 3 -0.24465335701246477 0.059529507050031294 0.9438714419765777 ['ENST00000486187.5_1_10:43078317-43078551:-|nuORF'] 37729 8707 HASGDVLV True PC9_epitope_Rep2 796.4079172786401 796.40682993586 38.854 2 -0.2446790436104478 0.059529507050031294 0.9438714419765777 ['ENSG00000106648|ENST00000392800|GALNTL5'] 36010 4895 GVDDKFYSK True NCI_RA007_Epitope_Rep4 1057.50802524273 1057.5069299358602 25.28 2 -0.24471988730264377 0.05956412899425711 0.9438714419765777 ['ENST00000589308.1_1_19:36606815-36612715:+|nuORF', 'nc|ENSG00000105254|Q99426-2|TBCB', 'ENST00000392178.8_1_19:36606435-36612715:+|nuORF', 'ENSG00000105254|ENST00000221855|TBCB', 'ENST00000481742.1_1_19:36606435-36607215:+|nuORF'] 110416 7046 TINADSSSSFP True NCI_RA007_Epitope_Rep3 1124.49858275784 1124.4974899358601 34.834 2 -0.24473086284405465 0.05956412899425711 0.9438714419765777 ['ADGRB3|p.P1168T|1|0.14|ENSG00000135298|chr6:69354275-69354275|C/A|missense_variant'] 16484 9930 EELYLNDNP True H1975_Epitope_Rep2 1105.49276910141 1105.49166993586 43.184 2 -0.24482837647042313 0.0596182517624105 0.9438714419765777 ['nc|ENSG00000108061|Q9UQ13-2|SHOC2', 'ENSG00000108061|ENST00000369452|SHOC2'] 29682 23127 FVNILFEEV True PC9_epitope_Rep2 1108.580461907 1108.57936993586 94.45 2 -0.2449306018473005 0.0596528685280963 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 36815 20551 GVPQALFGV True PC9_epitope_Rep4 886.4912529797799 886.49014993586 87.201 2 -0.24502406320452025 0.0596528685280963 0.9438714419765777 ['ENSG00000010292|ENST00000315579|NCAPD2'] 110868 9910 TLADGFTSPTP True H1975_Epitope_Rep3 1105.52915461013 1105.52804993586 43.151 2 -0.2451321084211244 0.05968858131487889 0.9438714419765777 ['ENSG00000138443|ENST00000261018|ABI2'] 126863 19426 VPTLVTPSA True PC9_epitope_Rep2 883.50148331031 883.50038993586 80.1 2 -0.24519645315482227 0.059704788898295724 0.9438714419765777 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 97519 14837 SGRKSPVLYL True PC9_epitope_Rep6 1118.64479349906 1118.64368993586 69.044 2 -0.2452047617832926 0.059704788898295724 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000034412'] 27819 4551 FQHQAFRREFW True NCI_RA007_Epitope_Rep2 1550.7531151614198 1550.75146490379 22.331 3 -0.2452515529178973 0.05973939929328622 0.9438714419765777 ['ENST00000523612.1_1_8:142469282-142469963:+|nuORF'] 54897 14061 LAGPAELL True H1975_Epitope_Rep2 782.4538048418999 782.4532549679301 59.24 1 -0.24527941145570478 0.05973939929328622 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 111130 17386 TLEPLHLEA True PC9_epitope_Rep3 1021.54441075145 1021.54330993586 72.045 2 -0.24534295107527032 0.05975670353534424 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 86389 13131 QQLQNQIRL True PC9_epitope_Rep1 1139.6411051009497 1139.64000993586 55.376 2 -0.24541320318480167 0.05976850744346098 0.9438714419765777 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD'] 139575 17156 YTNQTYIWS True PC9_epitope_Rep4 1174.5294889632999 1174.52838993586 73.996 2 -0.24543562756500464 0.05976850744346098 0.9438714419765777 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|0|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|93'] 75233 6899 NPKEFYHEV True PC9_epitope_Rep2 1161.54547338061 1161.54382490379 31.939 3 -0.24545312832014876 0.05976850744346098 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 14254 3920 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 21.389 2 -0.24546347652611533 0.05976850744346098 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 68436 15296 LTTNKWDVM True PC9_epitope_Rep6 1106.5430308524599 1106.54192993586 70.954 2 -0.2455122280030726 0.05976850744346098 0.9438714419765777 ['nc|ENSG00000239474|O60662-2|KLHL41', 'ENSG00000239474|ENST00000284669|KLHL41'] 66305 8030 LSQKRMYRKFH True H1975_Epitope_Rep3 1492.8085218625597 1492.80688490379 35.86 3 -0.24555138417554576 0.05976850744346098 0.9438714419765777 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 40266 12083 HRNELQMQL True PC9_epitope_Rep1 1167.5818759726699 1167.5807699358602 51.337 2 -0.24560278479069428 0.059785808920948036 0.9438714419765777 ['ENSG00000067900|ENST00000399799|ROCK1'] 47032 7644 IVSEKSRYSL True H1975_Epitope_Rep1 1180.6451874218799 1180.6440899358602 34.382 2 -0.24564826477632917 0.0598009089738164 0.9438714419765777 ['ENSG00000163686|ENST00000478253|ABHD6'] 130700 15920 VVDGNFEEV True PC9_epitope_Rep3 1006.46074069714 1006.46017496793 66.383 1 -0.24566133530399026 0.0598009089738164 0.9438714419765777 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 33806 13422 GLTLAQVTG True PC9_epitope_Rep6 858.4810822188999 858.47998993586 63.309 2 -0.24569628501804455 0.0598009089738164 0.9438714419765777 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 5151 17526 ALNSQAQVI True PC9_epitope_Rep1 942.5134449763399 942.51234993586 72.208 2 -0.24576354034660988 0.059836608522852726 0.9438714419765777 ['chr7:76490750-76492153|119|16.92|0.97|4.13|+|0|TE_info:AluJo,AluJo_dup29597,Alu,SINE,donor,-,76490617,76490750|None,DTX2|2'] 117232 15394 TYVSFRNLT True PC9_epitope_Rep1 1099.56620882519 1099.5651099358602 64.031 2 -0.24591954597688004 0.05990910596331119 0.9438714419765777 ['ENSG00000146242|ENST00000369750|TPBG'] 14597 13446 DVIEEYFK True NCI_RA007_Epitope_Rep2 1041.50187723313 1041.50137496793 56.944 1 -0.24593233108388254 0.05992640294388225 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12'] 16647 6595 EESQRYYWRPK True H1975_Epitope_Rep1 1540.7422756941999 1540.7406449037899 30.428 3 -0.24601804054515733 0.05994369928796158 0.9438714419765777 ['nc|ENSG00000150776|Q6ZUT1-3|NKAPD1', 'nc|ENSG00000150776|Q6ZUT1|NKAPD1', 'ENSG00000150776|ENST00000393047|NKAPD1', 'ENST00000530104.2_1_11:111946298-111951307:+|nuORF'] 106216 16408 SVPNKDVFQEL True PC9_epitope_Rep4 1274.65066672514 1274.6495699358602 71.075 2 -0.24606843319096747 0.05996099499558434 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 18110 11896 EILHFYKWTSP True NCI_RA007_Epitope_Rep1 1419.7186867153098 1419.7175899358601 50.255 2 -0.24619858426514737 0.05999558450160062 0.9438714419765777 ['nc|ENSG00000197822|Q16625-3|OCLN', 'ENSG00000197822|ENST00000396442|OCLN', 'nc|ENSG00000197822|Q16625-2|OCLN'] 103069 17655 SQLEREEKLL True PC9_epitope_Rep4 1243.67721582615 1243.67610993586 75.936 2 -0.24625218093823822 0.05999558450160062 0.9438714419765777 ['ENSG00000062370|ENST00000354340|ZNF112', 'nc|ENSG00000062370|Q9UJU3|ZNF112'] 2748 8944 AEVCLWESQGQ True NCI_RA007_Epitope_Rep5 1248.54448740444 1248.54283490379 41.063 3 -0.24633460468744756 0.06003017146221208 0.9438714419765777 ['GPR158|p.A1124Lfs*2|1|0.11|ENSG00000151025|chr10:25598987-25598987|C/-|frameshift_variant', 'ENSG00000151025|ENST00000376351|GPR158', 'ENST00000490549.1_1_10:25883203-25888200:+|nuORF'] 17184 8110 EHAGVISV True PC9_epitope_Rep4 810.42356734278 810.42246993586 38.649 2 -0.24635650808280685 0.06003017146221208 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 115885 16083 TVPDEIQEV True PC9_epitope_Rep3 1028.50260550912 1028.5015099358602 67.012 2 -0.24638775988403755 0.060047463988078816 0.9438714419765777 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant', 'ENST00000560519.1_1_15:64026898-64041594:-|nuORF'] 81195 18750 PPLLPPPPP True PC9_epitope_Rep2 923.5480395799099 923.54694993586 77.498 2 -0.2464007732841917 0.060064755877699695 0.9438714419765777 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENST00000525088.5_1_11:67202187-67202637:+|nuORF', 'ENSG00000175634|ENST00000312629|RPS6KB2'] 109738 8213 THGPPVQL True PC9_epitope_Rep4 847.45520182423 847.45410993586 39.05 2 -0.2464399182520029 0.060116627729438384 0.9438714419765777 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3'] 72443 4446 [Acetylation]-M[Oxidation]TM[Oxidation]DKSELVQK True H1975_Epitope_Rep3 1382.64215391756 1382.64104993586 22.224 2 -0.2464670721755978 0.060116627729438384 0.9438714419765777 ['ENSG00000166913|ENST00000353703|YWHAB'] 30228 21174 GAAAFFTAV True PC9_epitope_Rep3 853.4334037504899 853.4328549679301 86.733 1 -0.24649628697596115 0.060116627729438384 0.9438714419765777 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1'] 114960 19375 TTIGDITLS True PC9_epitope_Rep1 919.4862271689901 919.48512993586 79.335 2 -0.24658591019060763 0.06018356723747862 0.9438714419765777 ['ENST00000462363.6_1_1:198608398-198672548:+|nuORF'] 126441 11014 VPLPRNFPRVP True H1975_Epitope_Rep1 1290.75607528354 1290.7549699358601 47.326 2 -0.24659095209664353 0.06018356723747862 0.9438714419765777 ['ENST00000321037.4_1_6:46097759-46107324:+|nuORF'] 99195 13369 SLASNISREWR True NCI_RA007_Epitope_Rep1 1317.67894716165 1317.6778499358602 56.006 2 -0.24660052185444248 0.06018356723747862 0.9438714419765777 ['ENST00000482091.1_1_10:1089580-1089787:-|nuORF'] 30818 10412 GAPQVVAVTG True PC9_epitope_Rep5 897.4919812557698 897.4914349679301 45.035 1 -0.24660116016132091 0.06018356723747862 0.9438714419765777 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF'] 110217 8831 TIEDLLYSE True H1975_Epitope_Rep1 1081.5179212200899 1081.5168299358602 38.891 2 -0.24671539258142655 0.06018356723747862 0.9438714419765777 ['ENSG00000247746|ENST00000500968|USP51'] 34982 10563 GRADGYVL True PC9_epitope_Rep3 849.43446637965 849.43336993586 45.577 2 -0.24672630026329495 0.06018356723747862 0.9438714419765777 ['ENSG00000142937|ENST00000396651|RPS8'] 62726 22849 LLYFFPEHLLP True PC9_epitope_Rep1 1387.7540095948698 1387.75290993586 92.682 2 -0.24673935708340367 0.060198638955306236 0.9438714419765777 ['MORC1|p.Q837L|1|0.55|ENSG00000114487|chr3:108971370-108971370|T/A|missense_variant'] 9116 20577 AVLIDFSPLT True PC9_epitope_Rep5 1074.5961119711399 1074.5950099358602 84.196 2 -0.2467648303257169 0.060198638955306236 0.9438714419765777 ['ENST00000429172.5_2_2:171627798-171634191:+|nuORF'] 65478 2867 LSFIKILLKRR True NCI_RA007_Epitope_Rep1 1385.9234749618097 1385.92183490379 14.976 3 -0.24680250314451 0.060198638955306236 0.9438714419765777 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|122|3|sense'] 98617 12864 SINSHATEWSP True H1975_Epitope_Rep2 1227.55201531303 1227.55090993586 54.594 2 -0.24688211808075783 0.06020927965867922 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 39161 7328 HLEQLDERWRD True H1975_Epitope_Rep3 1495.71678922235 1495.7151449037901 33.162 3 -0.24689729156563717 0.06020927965867922 0.9438714419765777 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 9352 16608 AVTGTHTLAL True PC9_epitope_Rep2 982.54474510462 982.54364993586 69.126 2 -0.2469680111035383 0.06020927965867922 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 20627 16220 EQFAGVVLY True H1975_Epitope_Rep3 1024.5229470308798 1024.5223749679299 67.847 1 -0.247006689234088 0.06020927965867922 0.9438714419765777 ['PROS1|p.A303V|1|0.19|ENSG00000184500|chr3:93896633-93896633|G/A|missense_variant', 'ENSG00000184500|ENST00000394236|PROS1'] 126457 10027 VPLSDPTGP True NCI_RA007_Epitope_Rep5 881.44944773745 881.44834993586 45.209 2 -0.24701294434346105 0.06020927965867922 0.9438714419765777 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 63299 10234 LPAVVTADLR True H1975_Epitope_Rep1 1053.61824439805 1053.6171499358602 44.308 2 -0.24707451288565152 0.06020927965867922 0.9438714419765777 ['nc|ENSG00000105379|P38117-2|ETFB', 'ENSG00000105379|ENST00000309244|ETFB', 'ENST00000594361.1_1_19:51849976-51850294:-|nuORF'] 12587 7999 DLDSPLQEDP True H1975_Epitope_Rep3 1127.49824840467 1127.49714993586 35.738 2 -0.2471007111382992 0.06020927965867922 0.9438714419765777 ['nc|nan|Q8ND61-2|C3orf20', 'ENSG00000131379|ENST00000253697|C3orf20'] 79722 7057 PHQPFSQAV True PC9_epitope_Rep4 1009.4981292653699 1009.49702993586 34.407 2 -0.2471734417085935 0.06022434718646561 0.9438714419765777 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 68375 4703 LTSPEAAPAAP True H1975_Epitope_Rep3 1023.5236753068698 1023.5225699358599 23.215 2 -0.24719046298794758 0.06022434718646561 0.9438714419765777 ['NR4A1|p.A38T|1|0.09|ENSG00000123358|chr12:52054440-52054440|G/A|missense_variant'] 28197 12638 FRQQRPLEF True PC9_epitope_Rep1 1219.6461904813898 1219.64455490379 53.482 3 -0.24720353733221484 0.06022434718646561 0.9438714419765777 ['ENSG00000089693|ENST00000203630|MLF2'] 69969 17814 LYENWNKTF True PC9_epitope_Rep5 1213.57677350889 1213.57566993586 73.54 2 -0.24725070821299877 0.06024162850995752 0.9438714419765777 ['nc|ENSG00000132436|Q6PIW4-2|FIGNL1', 'ENSG00000132436|ENST00000433017|FIGNL1'] 93251 22382 RRRRRRWQ True PC9_epitope_Rep6 1268.7551212804399 1268.7540299358602 99.062 2 -0.24741056647776224 0.060258909197896365 0.9438714419765777 ['ENST00000487093.5_1_3:51575631-51661706:+|nuORF'] 32973 21366 GITDVIIGL True PC9_epitope_Rep4 899.53278343859 899.53168993586 90.351 2 -0.24748044324916887 0.060275080906148866 0.9438714419765777 ['DHTKD1|p.M221L|1|0.09|ENSG00000181192|chr10:12087673-12087673|A/T|missense_variant'] 32380 14103 GGETLDQVKMR True PC9_epitope_Rep3 1232.6183210510399 1232.61722993586 59.332 2 -0.24751698598920754 0.060275080906148866 0.9438714419765777 ['ENSG00000078237|ENST00000179259|TIGAR'] 126872 13952 VPTNIIAA True PC9_epitope_Rep4 797.4647038787699 797.4641549679301 61.569 1 -0.2476463087489473 0.06030742075457821 0.9438714419765777 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H', 'ENST00000521335.1_1_8:54745492-54754250:-|nuORF'] 66781 18893 LSVETLLDV True PC9_epitope_Rep1 987.5488274255499 987.54772993586 77.457 2 -0.24765999227278904 0.06030742075457821 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB', 'CDC42BPB-ZFYVE1|1|fusion', 'CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 106239 21077 SVPVIIAAV True PC9_epitope_Rep5 867.5429541994699 867.5424049679301 86.133 1 -0.2476637680882558 0.06030742075457821 0.9438714419765777 ['ENSG00000164292|ENST00000379982|RHOBTB3', 'ENST00000504949.1_1_5:95067575-95091515:+|nuORF'] 54452 9337 KYVKGLISI True NCI_RA007_Epitope_Rep4 1019.6379172134698 1019.63682993586 42.771 2 -0.24767511606738463 0.06030742075457821 0.9438714419765777 ['nc|ENSG00000118965|Q9P2L0|WDR35', 'ENSG00000118965|ENST00000281405|WDR35'] 78080 8113 PALVEQTAA True PC9_epitope_Rep6 898.47599683846 898.47488993586 40.74 2 -0.24796506514231695 0.06043501443306551 0.9438714419765777 ['nc|ENSG00000163349|Q86Z02-3|HIPK1', 'nc|ENSG00000163349|Q86Z02-2|HIPK1', 'HIPK1|p.R1189Efs*11|1|0.25|ENSG00000163349|chr1:113973442-113973442|C/-|frameshift_variant', 'ENSG00000163349|ENST00000426820|HIPK1', 'nc|ENSG00000163349|Q86Z02-4|HIPK1'] 45530 15615 ISFNNQLAL True PC9_epitope_Rep5 1018.5447451046199 1018.54364993586 65.074 2 -0.24798483655207354 0.060450066186203855 0.9438714419765777 ['WDR49|p.K409Sfs*23|1|0.16|ENSG00000174776|chr3:167529178-167529178|C/-|frameshift_variant', 'ENST00000460448.5_1_3:167254737-167322194:-|nuORF', 'ENSG00000174776|ENST00000682715|WDR49', 'nc|ENSG00000174776|Q8IV35-3|CFAP337'] 62866 22772 LMPVELNLF True PC9_epitope_Rep3 1074.57835373202 1074.5772499358602 92.862 2 -0.24801697970588574 0.060450066186203855 0.9438714419765777 ['ENST00000541124.5_1_17:40995311-40995464:+|nuORF'] 71027 13508 MESPFITSP True H1975_Epitope_Rep2 1007.46338354943 1007.46287496793 57.094 1 -0.2480393706002846 0.060450066186203855 0.9438714419765777 ['ENST00000274030.10_1_4:120160402-120160465:+|nuORF'] 97358 15869 SFYPEEVSSI True PC9_epitope_Rep1 1156.52882025696 1156.5277299358602 65.85 2 -0.24813244846302898 0.060538652449673686 0.9438714419765777 ['ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 96014 6548 SEAGLAGAPA True H1975_Epitope_Rep3 842.4133965818999 842.41284496793 30.154 1 -0.24817406723639748 0.060538652449673686 0.9438714419765777 ['ENSG00000177879|ENST00000316788|AP3S1'] 86129 14458 QPRFPAPVP True PC9_epitope_Rep5 1007.5552502186697 1007.55414993586 60.612 2 -0.24824613248468108 0.060538652449673686 0.9438714419765777 ['ENST00000548477.5_1_12:113772646-113772703:-|nuORF'] 3902 15344 AHDDSVMYL True PC9_epitope_Rep1 1049.44879611445 1049.4476899358601 63.839 2 -0.24828185397349664 0.060553696827089235 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 85639 13581 QLQAELRSL True PC9_epitope_Rep1 1056.5927579262 1056.5916699358602 57.095 2 -0.24839164653666554 0.060553696827089235 0.9438714419765777 ['nc|ENSG00000161944|P07307-3|ASGR2', 'nc|ENSG00000161944|P07307-2|ASGR2', 'ENSG00000161944|ENST00000691900|ASGR2', 'nc|ENSG00000161944|P07307|ASGR2', 'ENST00000576487.5_1_17:7011095-7018009:-|nuORF'] 36778 8419 GVPERREP True PC9_epitope_Rep3 938.4933782380998 938.49228993586 37.349 2 -0.24839579195608288 0.060553696827089235 0.9438714419765777 ['ENST00000499900.2_1_5:177045699-177046068:+|nuORF'] 92058 7714 RPRVTEPISA True PC9_epitope_Rep1 1124.6302060640799 1124.62855490379 34.492 3 -0.24842282813292046 0.06056317317942874 0.9438714419765777 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 131201 9891 VVPISEKDV True PC9_epitope_Rep4 984.54916177872 984.54806993586 45.698 2 -0.2484553717076932 0.06056317317942874 0.9438714419765777 ['ENST00000316902.11_1_14:23652148-23652238:-|nuORF'] 74245 14787 NIDPITMAY True H1975_Epitope_Rep3 1036.48993265044 1036.48937496793 62.258 1 -0.24863532479956166 0.06056317317942874 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 106484 2544 SVVHERVP True PC9_epitope_Rep6 921.5032146458099 921.50210993586 14.714 2 -0.2486737347063535 0.06056317317942874 0.9438714419765777 ['ENSG00000198964|ENST00000361781|SGMS1'] 74418 11828 NIVHDLPAA True PC9_epitope_Rep2 948.5028802926399 948.50178993586 50.827 2 -0.24868724102495152 0.06056317317942874 0.9438714419765777 ['nc|ENSG00000183527|O95456-2|PSMG1', 'ENSG00000183527|ENST00000331573|PSMG1', 'ENST00000411828.5_1_21:40547518-40555177:-|nuORF'] 35984 4373 GVAWRRDGT True NCI_RA007_Epitope_Rep3 1016.5151763118398 1016.51406993586 23.971 2 -0.24869181833294915 0.06056317317942874 0.9438714419765777 ['ENST00000413040.6_1_7:151038900-151042524:+|nuORF'] 111065 23185 TLDWEIVEL True PC9_epitope_Rep1 1116.5702911461199 1116.56977496793 93.976 1 -0.24871735616547203 0.06056317317942874 0.9438714419765777 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1'] 9349 23320 AVTGILVQL True PC9_epitope_Rep1 912.5644179200399 912.56332993586 94.491 2 -0.2487855412633552 0.06056317317942874 0.9438714419765777 ['ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000487805.6_1_3:49750857-49758735:+|nuORF'] 99716 12303 SLGFLLAT True H1975_Epitope_Rep2 820.4694549060399 820.46834993586 52.407 2 -0.2488650954888862 0.06058044001690959 0.9438714419765777 ['nc|ENSG00000197858|O43292-2|GPAA1', 'ENSG00000197858|ENST00000355091|GPAA1', 'ENST00000530796.1_1_8:145140395-145141025:+|nuORF', 'ENST00000529638.1_1_8:145140125-145141025:+|nuORF', 'ENST00000534072.1_1_8:145139936-145140713:+|nuORF'] 112654 13376 TPFEKGLHVV True PC9_epitope_Rep5 1125.61824439805 1125.6166049037902 56.467 3 -0.2488865411843405 0.06059659247550957 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 60942 7299 LLAALPREEHQ True H1975_Epitope_Rep1 1275.6935345966301 1275.6924299358602 33.086 2 -0.24888840899733236 0.06059659247550957 0.9438714419765777 ['ENST00000262376.10_1_16:4925091-4925301:+|nuORF'] 125267 13912 VLRLDSRLWP True PC9_epitope_Rep6 1253.72444080209 1253.72278490379 65.353 3 -0.2489075122072615 0.060613857746737734 0.9438714419765777 ['ENSG00000168209|ENST00000307365|DDIT4'] 56217 7027 LDPNDPNNAP True H1975_Epitope_Rep3 1065.4727023631701 1065.4716099358602 31.992 2 -0.24903783058600976 0.0606862582933598 0.9438714419765777 ['nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENSG00000048342|ENST00000424120|CC2D2A'] 66037 12012 LSNALLETP True H1975_Epitope_Rep3 956.5178616504401 956.51676993586 51.364 2 -0.24907227183819547 0.0607024056751144 0.9438714419765777 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000490583.5_1_22:20040979-20049207:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-2|TANGO2', 'nc|ENSG00000183597|Q6ICL3-3|TANGO2', 'nc|ENSG00000183597|Q6ICL3-4|TANGO2', 'ENST00000462579.5_1_22:20030937-20049207:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-5|TANGO2'] 23663 19441 EYGPIHILW True PC9_epitope_Rep6 1126.5811306133398 1126.58002993586 87.441 2 -0.24908487420224928 0.0607024056751144 0.9438714419765777 ['nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7', 'ENSG00000162627|ENST00000306121|SNX7'] 83609 2557 QDVDNASLAR True PC9_epitope_Rep6 1087.52580056519 1087.52470993586 14.764 2 -0.24918223419222352 0.060736929155563724 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF'] 128995 5809 VSYDEWNRK True NCI_RA007_Epitope_Rep1 1195.56218607391 1195.56108993586 26.65 2 -0.24921847489942447 0.060736929155563724 0.9438714419765777 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 11127 4903 DEEGFDYNEE True H1975_Epitope_Rep3 1245.4309566904901 1245.4298499358601 23.988 2 -0.24931841527055687 0.06077256689209056 0.9438714419765777 ['ENSG00000105879|ENST00000440859|CBLL1', 'ENST00000487517.1_1_7:107384608-107395937:+|nuORF'] 100649 4321 SLQSSETHPP True H1975_Epitope_Rep3 1081.50400249145 1081.50290993586 21.737 2 -0.2495297307294708 0.06082434443852331 0.9438714419765777 ['ENSG00000121570|ENST00000335658|DPPA4'] 132820 17448 VYTFGLGQF True NCI_RA007_Epitope_Rep3 1030.5123823471797 1030.51128993586 76.551 2 -0.24954022299123646 0.06082434443852331 0.9438714419765777 ['nc|ENSG00000156313|Q92834-5|RPGR', 'nc|ENSG00000156313|Q92834-3|RPGR', 'nc|ENSG00000156313|Q92834-4|RPGR', 'nc|ENSG00000156313|Q92834-2|RPGR', 'nc|ENSG00000156313|Q92834|RPGR', 'ENSG00000156313|ENST00000645032|RPGR', 'RPGR|p.Q273H|1|0.7|ENSG00000156313|chrX:38304750-38304750|C/A|missense_variant'] 55688 9039 LDCHMALIA True H1975_Epitope_Rep3 985.4725087644899 985.47140993586 39.756 2 -0.24958200673292924 0.06082434443852331 0.9438714419765777 ['ENST00000419888.1_1_20:18763070-18763415:-|nuORF'] 27817 16669 FQGVEFHYV True PC9_epitope_Rep6 1124.5290950404801 1124.5279899358602 76.586 2 -0.24964383841236662 0.06083936643269266 0.9438714419765777 ['ENSG00000143815|ENST00000272163|LBR'] 33243 7873 GLAEVAAAV True NCI_RA007_Epitope_Rep3 799.4439684341899 799.44341496793 38.087 1 -0.2496605139324137 0.06083936643269266 0.9438714419765777 ['ENSG00000170684|ENST00000303809|ZNF296'] 86393 14426 QQLRTGEVL True PC9_epitope_Rep1 1042.5771078620598 1042.5760099358602 60.313 2 -0.24968729599384037 0.06083936643269266 0.9438714419765777 ['nc|ENSG00000160097|Q8NAU1-4|FNDC5', 'nc|ENSG00000160097|Q8NAU1-3|FNDC5', 'nc|ENSG00000160097|Q8NAU1-2|FNDC5', 'ENSG00000160097|ENST00000373471|FNDC5'] 137889 7435 YPNSGSVSA True PC9_epitope_Rep1 880.39266113732 880.3921149679301 33.414 1 -0.24978250595950094 0.0608487966195113 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 37075 22709 GVSIALLGV True PC9_epitope_Rep2 827.5116540711899 827.51110496793 92.845 1 -0.24979663134568525 0.0608487966195113 0.9438714419765777 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-3|CDCP1'] 79681 23334 PHLERIREK True PC9_epitope_Rep5 1176.6727395823998 1176.6716499358602 94.736 2 -0.2498396808596107 0.0608487966195113 0.9438714419765777 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.W3587Cfs*14|1|0.26|ENSG00000198626|chr1:237727121-237727121|G/-|frameshift_variant', 'RYR2|p.P2526Hfs*3|1|0.2|ENSG00000198626|chr1:237649940-237649940|C/-|frameshift_variant', 'RYR2|p.E1269Kfs*3|2|0.16|ENSG00000198626|chr1:237589997-237589998|-/AA|frameshift_variant', 'RYR2|p.R1482Pfs*13|1|0.23|ENSG00000198626|chr1:237595506-237595506|G/-|frameshift_variant', 'RYR2|p.R1585Afs*29|1|0.24|ENSG00000198626|chr1:237610823-237610824|-/C|frameshift_variant', 'RYR1|p.R4174Pfs*35|1|0.31|ENSG00000196218|chr19:38561349-38561352|CCGC/-|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.M2582Afs*19|1|0.11|ENSG00000196218|chr19:38502635-38502636|TA/-|frameshift_variant'] 132050 11986 VYIDRVRSL True PC9_epitope_Rep5 1119.64004247179 1119.6389499358602 51.1 2 -0.24984253483862584 0.0608487966195113 0.9438714419765777 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA'] 22434 5516 ETFSQQAPP True H1975_Epitope_Rep2 1003.4610750503099 1003.45996993586 26.229 2 -0.2498580258715913 0.0608487966195113 0.9438714419765777 ['ENSG00000081853|ENST00000394576|PCDHGA2'] 129559 13874 VTGFGIQLQG True PC9_epitope_Rep3 1018.54474510462 1018.54364993586 58.448 2 -0.2498908060504132 0.0608487966195113 0.9438714419765777 ['nc|ENSG00000155974|Q9Y3R0-3|GRIP1', 'nc|ENSG00000155974|Q9Y3R0-2|GRIP1', 'ENSG00000155974|ENST00000359742|GRIP1', 'GRIP1|p.E618Nfs*9|1|0.15|ENSG00000155974|chr12:66406415-66406415|C/-|frameshift_variant'] 70209 21119 LYLPSFFTY True NCI_RA007_Epitope_Rep5 1149.57464825057 1149.5740749679298 88.254 1 -0.24990614256633936 0.0608487966195113 0.9438714419765777 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 10335 16406 C[Carbamidomethyl]IESLIAVFQK True NCI_RA007_Epitope_Rep1 1306.6955090220097 1306.6944099358602 67.93 2 -0.24996138408725496 0.0608487966195113 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 5553 17895 ANILQTSV True PC9_epitope_Rep5 844.46543215476 844.46432993586 73.851 2 -0.24999523385904046 0.060864932392710173 0.9438714419765777 ['ENSG00000140479|ENST00000611716|PCSK6', 'nc|ENSG00000140479|P29122-7|PCSK6'] 27595 9968 FPSAAATAA True PC9_epitope_Rep2 805.39701824177 805.39592993586 43.672 2 -0.2500173647561764 0.060864932392710173 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 116087 13941 TVSFSTQAP True PC9_epitope_Rep2 936.4552613938798 936.45416993586 58.903 2 -0.25003710752754804 0.0608810669801962 0.9438714419765777 ['ENST00000399423.8_1_14:24711613-24711790:-|nuORF'] 134749 10927 WWWRRRRRHR True NCI_RA007_Epitope_Rep3 1649.9140815333299 1649.9124449037902 50.062 3 -0.25003818223486435 0.0608810669801962 0.9438714419765777 ['ENST00000395136.6_2_1:70687096-70687432:+|nuORF', 'ENST00000475204.5_1_1:70687068-70687435:+|nuORF', 'ENST00000370951.5_1_1:70671397-70687435:+|nuORF', 'ENST00000463877.1_1_1:70671397-70687435:+|nuORF'] 2959 16479 AFIEKHWTF True PC9_epitope_Rep2 1177.59202965021 1177.5903749037902 68.628 3 -0.2501680119190159 0.06093506016349775 0.9438714419765777 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 33918 21450 GMEAALLNV True PC9_epitope_Rep4 916.46880328304 916.46770993586 90.695 2 -0.25031436059673673 0.06097068116687486 0.9438714419765777 ['ENSG00000130304|ENST00000252595|SLC27A1', 'ENST00000598424.5_1_19:17597384-17597952:+|nuORF'] 40756 15319 HVAGMLAVAV True PC9_epitope_Rep5 966.5320722459398 966.53096993586 63.936 2 -0.25041694890162036 0.06102130786186628 0.9438714419765777 ['ENSG00000204052|ENST00000372441|LRRC73'] 98620 16202 SINSILDYI True H1975_Epitope_Rep2 1036.54407639828 1036.54357496793 67.53 1 -0.25042280610215933 0.06102130786186628 0.9438714419765777 ['ENST00000558545.1_1_15:49431640-49447775:-|nuORF', 'ENSG00000166200|ENST00000388901|COPS2', 'nc|ENSG00000166200|P61201-2|COPS2'] 124563 14915 VLGPPVIV True H1975_Epitope_Rep3 792.5109257952 792.51037496793 62.757 1 -0.2504540612847046 0.06102130786186628 0.9438714419765777 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000476102.1_1_1:159900586-159913268:-|nuORF'] 8288 13344 ATLAANNTQL True PC9_epitope_Rep2 1015.5298233164701 1015.52872993586 56.601 2 -0.25046450781757557 0.06102130786186628 0.9438714419765777 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 100301 11873 SLLVMKMHQLK True NCI_RA007_Epitope_Rep1 1326.7515841500601 1326.75048993586 50.166 2 -0.2505734854318056 0.06103743433378642 0.9438714419765777 ['ENST00000443101.6_1_7:112077294-112095874:+|nuORF', 'ENST00000476927.5_1_7:112091109-112095874:+|nuORF'] 90859 16334 RKWRRKRRWNN True NCI_RA007_Epitope_Rep2 1654.9505266116994 1654.94942993586 68.263 2 -0.2505797545211955 0.06103743433378642 0.9438714419765777 ['ENST00000553345.5_1_20:31020694-31021097:+|nuORF'] 64085 11541 LQECHWWRRDW True H1975_Epitope_Rep1 1613.7309998178498 1613.7299099358602 49.376 2 -0.25066129841374446 0.06107192711777239 0.9438714419765777 ['ENST00000368192.8_1_1:157095491-157095569:-|nuORF'] 21888 9302 ESERRWVLTGT True H1975_Epitope_Rep2 1332.6786128084798 1332.6769649037901 40.738 3 -0.25067397932891117 0.06107192711777239 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 136451 17358 YHGLTVPL True PC9_epitope_Rep3 898.4912529797799 898.49014993586 71.94 2 -0.25073227959726235 0.06108917255946368 0.9438714419765777 ['ENSG00000113732|ENST00000519374|ATP6V0E1'] 64366 17931 LQPPPPTWA True PC9_epitope_Rep5 1005.52836676449 1005.5277749679301 73.988 1 -0.25079074761678893 0.061106417367667046 0.9438714419765777 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 138046 4263 YQDPHSTAV True PC9_epitope_Rep6 1016.45632402304 1016.45522993586 23.408 2 -0.2508576889530795 0.061138659320477504 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 59663 8603 LGSTGSELLR True NCI_RA007_Epitope_Rep1 1031.56112344475 1031.56002993586 37.465 2 -0.2508706721870505 0.061138659320477504 0.9438714419765777 ['ENST00000452236.2_1_6:28554764-28555010:-|nuORF'] 58504 8921 LEYWMRLRFP True NCI_RA007_Epitope_Rep4 1409.7278119303696 1409.72670993586 41.148 2 -0.25088843360273816 0.061138659320477504 0.9438714419765777 ['nc|ENSG00000092200|Q96KN7-3|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-2|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-5|RPGRIP1', 'ENSG00000092200|ENST00000400017|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-6|RPGRIP1'] 85854 12983 QNETGIAAL True PC9_epitope_Rep5 915.4661604307498 915.46561496793 54.948 1 -0.2508963881021452 0.061138659320477504 0.9438714419765777 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 106653 18354 SYADQMFLL True NCI_RA007_Epitope_Rep3 1086.50558271458 1086.5050749679299 80.375 1 -0.25097186174396624 0.06117089653652624 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP'] 55991 21205 LDINFQEQP True PC9_epitope_Rep2 1102.5294889632999 1102.52838993586 87.023 2 -0.2509880489027377 0.06117089653652624 0.9438714419765777 ['ENST00000426595.1_1_7:55979573-55979666:+|nuORF'] 82129 9185 PTDENLLKY True H1975_Epitope_Rep1 1091.54989005471 1091.5487899358602 40.237 2 -0.25098821859706816 0.06117089653652624 0.9438714419765777 ['ENSG00000137547|ENST00000260102|MRPL15'] 5351 9293 ALTAASGVMVP True H1975_Epitope_Rep3 1015.5372171960299 1015.5361099358599 40.74 2 -0.2509942952516292 0.06117089653652624 0.9438714419765777 ['BTN2A2|p.G501A|1|0.37|ENSG00000124508|chr6:26392897-26392897|G/C|missense_variant'] 68715 4848 LVDENEVERP True H1975_Epitope_Rep3 1198.5829810881398 1198.58188993586 23.773 2 -0.25103942882635183 0.06120650078046093 0.9438714419765777 ['ENST00000505125.5_1_4:54245288-54325613:+|nuORF'] 81333 4709 PPRPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 24.658 2 -0.2511245549304794 0.0612559676827029 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 12416 2627 DKIEARKRAK True NCI_RA007_Epitope_Rep4 1213.72550343125 1213.72384490379 14.727 3 -0.2511529053835096 0.0612559676827029 0.9438714419765777 ['ENSG00000100077|ENST00000324198|GRK3'] 72723 6487 MYRRWWEQFVQ True NCI_RA007_Epitope_Rep3 1627.77180200067 1627.7701649037901 32.547 3 -0.25118899816191503 0.0612559676827029 0.9438714419765777 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 116903 14234 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47054993586 60.017 2 -0.2512014971388291 0.0612559676827029 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 61841 10776 LLLCPYTVERE True H1975_Epitope_Rep1 1334.69042336214 1334.68932993586 46.413 2 -0.25121816953829545 0.0612559676827029 0.9438714419765777 ['ENST00000472045.1_1_5:131820398-131820557:-|nuORF'] 124357 5687 VLDSNVKHF True NCI_RA007_Epitope_Rep1 1057.55564414149 1057.5545499358602 26.18 2 -0.25128837076596994 0.061272079615144505 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 67045 8339 LTARKYREWK True NCI_RA007_Epitope_Rep1 1349.7568035595298 1349.75515490379 36.437 3 -0.2513044074659084 0.061272079615144505 0.9438714419765777 ['nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENST00000522590.1_1_6:154480965-154534056:-|nuORF', 'nc|ENSG00000074706|Q8WWN9|IPCEF1', 'ENSG00000074706|ENST00000367220|IPCEF1'] 22752 9026 EVANSVGLTG True PC9_epitope_Rep1 945.4767251144499 945.47562993586 39.568 2 -0.2513564371461414 0.06130767677138608 0.9438714419765777 ['ENSG00000273079|ENST00000609686|GRIN2B'] 66299 5106 LSQIQENYQKP True NCI_RA007_Epitope_Rep5 1346.68302948258 1346.6813849037899 26.337 3 -0.2513896173534512 0.061323785917561734 0.9438714419765777 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF'] 30364 19223 GAELVLRRFP True PC9_epitope_Rep1 1156.67167695324 1156.6705699358602 78.738 2 -0.25147893395645465 0.061323785917561734 0.9438714419765777 ['ENST00000313478.11_1_15:50941001-50979001:-|nuORF'] 15055 9399 EAALEAAVLNK True H1975_Epitope_Rep3 1127.6186383208699 1127.61754993586 41.155 2 -0.25151501483445654 0.06135374786583687 0.9438714419765777 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A'] 118024 6101 VASVVDVAK True H1975_Epitope_Rep3 886.5123823471798 886.51128993586 28.479 2 -0.25154327742911287 0.06135374786583687 0.9438714419765777 ['ENSG00000167676|ENST00000301286|PLIN4'] 45044 17778 IQNLVSASL True PC9_epitope_Rep2 943.53384606775 943.53274993586 73.671 2 -0.2515629644372865 0.06135374786583687 0.9438714419765777 ['nc|ENSG00000110330|Q13490-2|BIRC2', 'ENSG00000110330|ENST00000227758|BIRC2'] 130586 6895 VVAAHLAGA True PC9_epitope_Rep3 807.46028720467 807.45918993586 31.536 2 -0.25161409870310525 0.06135374786583687 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 44547 13521 IPATPGIGA True PC9_epitope_Rep3 795.4490538146299 795.44794993586 57.059 2 -0.25162558387661127 0.06135374786583687 0.9438714419765777 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 60892 8562 LKRKRKTFK True NCI_RA007_Epitope_Rep5 1203.7927951454296 1203.7911449037902 39.616 3 -0.25163510225511637 0.06135374786583687 0.9438714419765777 ['ENST00000514814.5_1_5:64817333-64824304:-|nuORF'] 10030 18386 AYTTEHWLV True PC9_epitope_Rep5 1118.53965972418 1118.53856993586 75.741 2 -0.25172199115149246 0.06136759981642956 0.9438714419765777 ['nc|ENSG00000134910|P46977-2|STT3A', 'ENSG00000134910|ENST00000392708|STT3A', 'ENST00000526364.1_1_11:125488416-125491330:+|nuORF'] 73416 14200 NESGELVAI True PC9_epitope_Rep3 930.4658260775799 930.46472993586 59.707 2 -0.25172665878072287 0.06136759981642956 0.9438714419765777 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 136082 15077 YGAQASMGL True PC9_epitope_Rep5 896.40620302648 896.4056549679301 63.001 1 -0.2517354923413209 0.06136759981642956 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14'] 27265 14778 FLWREQFYRYY True H1975_Epitope_Rep3 1669.8041476747699 1669.8030499358601 62.222 2 -0.2517387006441378 0.06136759981642956 0.9438714419765777 ['ENSG00000159069|ENST00000325285|FBXW5', 'nc|ENSG00000159069|Q969U6-2|FBXW5'] 58484 5700 LEYMDRMVGYK True H1975_Epitope_Rep1 1403.65774333487 1403.65609490379 26.992 3 -0.25180698686875286 0.061421543431970045 0.9438714419765777 ['ENSG00000171451|ENST00000310045|DSEL'] 66991 19497 LTAEDLFEA True PC9_epitope_Rep6 1007.4811417885498 1007.48004993586 87.657 2 -0.2518953242061196 0.061437644553764825 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 61100 9272 LLCNCQVP True NCI_RA007_Epitope_Rep5 888.4197449156401 888.41864993586 42.311 2 -0.2519730197867682 0.061437644553764825 0.9438714419765777 ['ENSG00000144182|ENST00000651691|LIPT1'] 70545 15571 LYTVQSDVW True NCI_RA007_Epitope_Rep4 1109.5393253710097 1109.53822993586 67.643 2 -0.25201654452721367 0.06149158391306742 0.9438714419765777 ['ENSG00000092445|ENST00000263798|TYRO3'] 40030 10997 HQVKIGDFGL True NCI_RA007_Epitope_Rep4 1112.5978433066398 1112.59674993586 49.167 2 -0.2520598331781816 0.06152716593245228 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 97299 7026 SFRSFQRS True H1975_Epitope_Rep3 1013.50427727497 1013.50318993586 31.988 2 -0.2520618180988218 0.06154439162276757 0.9438714419765777 ['ENST00000530743.1_1_X:74520797-74523284:+|nuORF'] 102339 6504 SPVFTSRSA True PC9_epitope_Rep5 950.48214484806 950.48159496793 29.99 1 -0.2521050045907003 0.06157884110640016 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 18636 19897 ELANYQVL True PC9_epitope_Rep3 948.4916469025999 948.49054993586 81.775 2 -0.25213349342266594 0.06157884110640016 0.9438714419765777 ['nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1', 'nc|ENSG00000183023|P32418-2|SLC8A1', 'nc|ENSG00000183023|P32418-3|SLC8A1', 'nc|ENSG00000183023|P32418-4|SLC8A1', 'SLC8A1|p.S355C|1|0.18|ENSG00000183023|chr2:40429218-40429218|T/A|missense_variant', 'SLC8A1|p.I346M|1|0.07|ENSG00000183023|chr2:40429243-40429243|T/C|missense_variant'] 20374 20842 EPIPYEFMA True PC9_epitope_Rep4 1095.49468367771 1095.4935899358602 88.322 2 -0.25215376890153307 0.06159606489978709 0.9438714419765777 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 68517 2838 LTVRGRSWCWR True NCI_RA007_Epitope_Rep1 1418.7353569222998 1418.73370490379 14.863 3 -0.2522584201868671 0.061629379485014776 0.9438714419765777 ['ENST00000422053.3_1_20:368928-376885:+|nuORF'] 122959 12346 VGWICHFSYGK True H1975_Epitope_Rep1 1295.6121134717898 1295.61100993586 52.519 2 -0.2522787041980543 0.061629379485014776 0.9438714419765777 ['ENST00000522958.5_1_5:179046175-179048291:-|nuORF'] 17739 8469 EHSYIQKEL True PC9_epitope_Rep1 1145.57168812845 1145.5700549037902 37.411 3 -0.252294811054866 0.061629379485014776 0.9438714419765777 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 92051 4496 RPRRRPRRWLK True NCI_RA007_Epitope_Rep2 1575.9810984639896 1575.9800099358602 22.119 2 -0.25231611176590707 0.06164660108647776 0.9438714419765777 ['ENST00000251102.12_1_16:57965650-57974178:-|nuORF'] 104666 8635 STAAKIMGV True PC9_epitope_Rep6 876.4738886634799 876.47278993586 43.032 2 -0.25240845727435 0.061682174383820586 0.9438714419765777 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31', 'ENST00000498612.1_1_19:54622012-54631467:+|nuORF', 'nc|ENSG00000105618|Q8WWY3-3|PRPF31', 'ENST00000466404.5_1_19:54621832-54631576:+|nuORF', 'ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31'] 1838 12138 AEIEDPPIP True H1975_Epitope_Rep3 979.4862271689899 979.48512993586 51.857 2 -0.2524579808966058 0.061734965407131456 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 54289 8078 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 40.572 3 -0.25248340533020924 0.061734965407131456 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 54904 18240 LAGPAELL True PC9_epitope_Rep6 782.4538048418999 782.4532549679301 82.801 1 -0.25251531326266285 0.061752183806797326 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 14006 5074 DRTQYIDSSK True H1975_Epitope_Rep3 1211.57823006087 1211.57712993586 24.635 2 -0.25261363317624547 0.06178661871031673 0.9438714419765777 ['ENSG00000136546|ENST00000643258|SCN7A', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 54809 19143 LAFEGPILL True H1975_Epitope_Rep3 971.5691689473098 971.5686249679301 80.269 1 -0.25265508788169133 0.06178661871031673 0.9438714419765777 ['ENSG00000188994|ENST00000369577|ZNF292', 'ZNF292|p.S1288Pfs*23|1|0.24|ENSG00000188994|chr6:87257486-87257486|T/-|frameshift_variant'] 37455 19730 GYADIVQLL True NCI_RA007_Epitope_Rep1 990.5385970950199 990.5380449679301 80.932 1 -0.25270712708026133 0.06180156705873718 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 44010 24231 ILIDWLVQV True PC9_epitope_Rep5 1097.64848189717 1097.64738993586 98.21 2 -0.2527123900249663 0.06180156705873718 0.9438714419765777 ['ENSG00000134057|ENST00000256442|CCNB1', 'nc|ENSG00000134057|P14635-2|CCNB1'] 74079 8852 NHVANSPVSI True PC9_epitope_Rep4 1036.53015766964 1036.5290699358602 41.58 2 -0.25276655426675165 0.06180156705873718 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 17480 11397 EHGPENIVM True PC9_epitope_Rep5 1024.46478053176 1024.4636899358602 48.836 2 -0.25282377566150843 0.0618348623853211 0.9438714419765777 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 24357 12084 FAEANTEAI True NCI_RA007_Epitope_Rep4 964.4501760134399 964.44906993586 53.48 2 -0.25283740010800343 0.0618348623853211 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1'] 81334 4791 PPRPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 25.002 2 -0.25285425908567627 0.0618348623853211 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 8275 7402 ATIRVLESVQK True NCI_RA007_Epitope_Rep4 1242.7295857521797 1242.7279349037901 35.113 3 -0.25300008240567323 0.06185094124986239 0.9438714419765777 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B'] 83024 9531 PYKVTQDEL True PC9_epitope_Rep4 1091.54989005471 1091.5487899358602 44.274 2 -0.25300178018099334 0.06185094124986239 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF', 'ENST00000494618.1_1_2:232322276-232325237:-|nuORF'] 81429 7065 PQEEAPEV True H1975_Epitope_Rep3 897.4079768482899 897.4074249679301 32.143 1 -0.25308283151703703 0.06188309543903423 0.9438714419765777 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 25673 6455 FFERRYQERMK True NCI_RA007_Epitope_Rep5 1588.7932657212398 1588.79216993586 31.494 2 -0.25310085444219904 0.06188309543903423 0.9438714419765777 ['nc|ENSG00000188732|A4D161-3|FAM221A', 'nc|ENSG00000188732|A4D161-2|FAM221A', 'ENSG00000188732|ENST00000344962|FAM221A'] 16213 13494 EEFPSFGA True H1975_Epitope_Rep3 882.3759484440199 882.37484993586 57.182 2 -0.253139049172018 0.06188309543903423 0.9438714419765777 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000494862.1_1_2:242169018-242169382:-|nuORF', 'ENST00000484412.1_1_2:242169018-242170248:-|nuORF', 'ENST00000487169.5_1_2:242169018-242169255:-|nuORF'] 25672 6359 FFERRYQERMK True NCI_RA007_Epitope_Rep5 1588.7932657212398 1588.79216993586 31.135 2 -0.2531759886051433 0.06188309543903423 0.9438714419765777 ['nc|ENSG00000188732|A4D161-3|FAM221A', 'nc|ENSG00000188732|A4D161-2|FAM221A', 'ENSG00000188732|ENST00000344962|FAM221A'] 118605 17018 VEALIALT True PC9_epitope_Rep5 828.49566965388 828.49456993586 70.478 2 -0.2532692565328706 0.061892357926404226 0.9438714419765777 ['ENSG00000242028|ENST00000442995|HYPK', 'ENST00000458412.1_2_15:44093902-44094001:+|nuORF'] 140435 17768 YYFEGIKQTF True PC9_epitope_Rep6 1294.6233893481397 1294.6217549037901 80.978 3 -0.2532762877061443 0.061892357926404226 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 12679 7586 DLETGVHLDP True H1975_Epitope_Rep3 1094.5244035828598 1094.5233099358602 34.16 2 -0.2532776794124107 0.061892357926404226 0.9438714419765777 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110501354-110532119:+|nuORF'] 98165 9594 SIDEVVEK True NCI_RA007_Epitope_Rep1 917.4705771048499 917.46948993586 41.315 2 -0.25332616081640835 0.061892357926404226 0.9438714419765777 ['nc|ENSG00000132359|Q684P5-3|RAP1GAP2', 'nc|ENSG00000132359|Q684P5-2|RAP1GAP2', 'ENSG00000132359|ENST00000254695|RAP1GAP2'] 124444 13398 VLERQCGYKLF True PC9_epitope_Rep4 1354.7067421326199 1354.70564993586 59.436 2 -0.253408594120369 0.061892357926404226 0.9438714419765777 ['nc|ENSG00000115598|Q9HB29-2|IL1RL2', 'ENSG00000115598|ENST00000264257|IL1RL2'] 89528 4401 RERLEQQVP True NCI_RA007_Epitope_Rep5 1153.62036965637 1153.61926993586 23.559 2 -0.25341414416378377 0.061892357926404226 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 107874 15533 TASPTTTAAI True PC9_epitope_Rep1 932.48147614172 932.48036993586 64.572 2 -0.2534230167649399 0.061892357926404226 0.9438714419765777 ['ENST00000319070.2_1_16:681311-683059:+|nuORF'] 46497 22763 ITPENLPQILL True PC9_epitope_Rep2 1249.7281887698498 1249.72708993586 93.05 2 -0.25348655278194543 0.061892357926404226 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3'] 75340 6651 NQADKAINTAV True PC9_epitope_Rep4 1143.5884008217502 1143.58730993586 32.752 2 -0.25353079722297867 0.06190275306762532 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 67758 15373 LTGTWTSV True PC9_epitope_Rep2 863.43888305375 863.43778993586 64.415 2 -0.25355490001085484 0.06190275306762532 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 23210 9965 EVQEQWPCLP True H1975_Epitope_Rep2 1227.5594091925898 1227.55830993586 43.322 2 -0.25355622381581144 0.06190275306762532 0.9438714419765777 ['nc|ENSG00000117411|O60909-3|B4GALT2'] 107221 18989 SYPKCFSLGV True PC9_epitope_Rep4 1099.53721719603 1099.5361099358602 81.133 2 -0.25356755987228313 0.06190275306762532 0.9438714419765777 ['ENSG00000188649|ENST00000646931|CC2D2B', 'nc|ENSG00000188649|Q6DHV5-4|CC2D2B'] 67799 11681 LTHTHTLSL True PC9_epitope_Rep4 1021.55564414149 1021.55454993586 52.693 2 -0.2535749580120198 0.06190275306762532 0.9438714419765777 ['ENST00000590846.1_1_18:31804054-31804756:-|nuORF', 'ENST00000588355.1_1_18:31804054-31804846:-|nuORF'] 90777 24375 RKRRFQLRRCM True PC9_epitope_Rep4 1548.8718079087996 1548.87070993586 102.24 2 -0.2535990313862175 0.06190275306762532 0.9438714419765777 ['ENSG00000230358|ENST00000424157|SPDYE21'] 11251 10416 DEQREKLVL True PC9_epitope_Rep1 1128.6138872935999 1128.61225490379 44.949 3 -0.2536061787910866 0.06190275306762532 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 129913 15668 VTLTSIVP True PC9_epitope_Rep2 828.49566965388 828.49456993586 65.544 2 -0.2536947065656316 0.06191882324890413 0.9438714419765777 ['ENSG00000165912|ENST00000298838|PACSIN3'] 65034 14005 LSDKEELVGT True PC9_epitope_Rep2 1089.5553693579698 1089.55426993586 59.142 2 -0.25369623052139073 0.06191882324890413 0.9438714419765777 ['GDF6|p.A164T|1|0.6|ENSG00000156466|chr8:96145441-96145441|C/T|missense_variant'] 111789 15372 TLQTLEKL True PC9_epitope_Rep2 944.5542471591599 944.55314993586 64.411 2 -0.25379048804126064 0.06199104981292642 0.9438714419765777 ['ENSG00000159708|ENST00000329956|LRRC36'] 126313 20255 VPIVSALAV True PC9_epitope_Rep4 867.5429541994699 867.54184993586 86.053 2 -0.25386334878725764 0.06202659330582302 0.9438714419765777 ['LIN54|p.Q410L|1|0.2|ENSG00000189308|chr4:82939902-82939902|T/A|missense_variant'] 63476 13463 LPHGFTNMA True PC9_epitope_Rep5 986.4643866089401 986.46328993586 56.803 2 -0.2539478324015064 0.06206213549499322 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 1305 7265 AEDVVARVP True H1975_Epitope_Rep2 954.5134449763399 954.51234993586 32.881 2 -0.25397102716625397 0.06207933684229831 0.9438714419765777 ['ENSG00000197724|ENST00000359246|PHF2'] 69319 12855 LVPPDQPEV True PC9_epitope_Rep6 992.51786165044 992.51676993586 60.964 2 -0.2540808520105674 0.062150415375304885 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 2913 9294 AFDKMCSKLPK True H1975_Epitope_Rep1 1266.6464503751802 1266.6453499358602 40.657 2 -0.2540851315792535 0.062150415375304885 0.9438714419765777 ['ENSG00000197746|ENST00000394936|PSAP', 'nc|ENSG00000197746|P07602-2|PSAP', 'nc|ENSG00000197746|P07602-3|PSAP'] 101010 20203 SLTFSPNWQP True PC9_epitope_Rep5 1175.56112344475 1175.56002993586 82.759 2 -0.2541434016371649 0.06216647411564064 0.9438714419765777 ['ENST00000557990.1_3_15:91459481-91459855:+|nuORF'] 19901 11824 ELWQEEEQKRR True PC9_epitope_Rep6 1529.7586540343298 1529.7575499358602 56.687 2 -0.2542001747683049 0.06216647411564064 0.9438714419765777 ['ENSG00000159450|ENST00000614923|TCHH'] 124541 9202 VLGDSEEEDMG True H1975_Epitope_Rep1 1179.4601486437898 1179.45904993586 40.302 2 -0.2542538024591098 0.06219060540500898 0.9438714419765777 ['ENST00000469726.5_1_1:17942561-18023872:+|nuORF', 'nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L', 'nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L', 'ENSG00000074964|ENST00000361221|ARHGEF10L', 'ARHGEF10L|p.G813Vfs*32|1|0.34|ENSG00000074964|chr1:17654677-17654677|G/-|frameshift_variant', 'nc|ENSG00000074964|Q9HCE6-5|ARHGEF10L'] 55767 5480 LDEEFQNSP True H1975_Epitope_Rep1 1077.46146897313 1077.4603699358602 26.14 2 -0.25433222193625493 0.06219060540500898 0.9438714419765777 ['NEIL3|p.R295Kfs*4|1|0.36|ENSG00000109674|chr4:177351392-177351394|TAG/AA|frameshift_variant', 'ENSG00000109674|ENST00000264596|NEIL3', 'ENST00000513321.1_1_4:178274466-178274907:+|nuORF'] 78500 7558 PDGQEAKALP True H1975_Epitope_Rep2 1024.5189242795998 1024.5178299358602 34.025 2 -0.254390933260244 0.06219060540500898 0.9438714419765777 ['ENSG00000131848|ENST00000683990|ZSCAN5A', 'nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A', 'ENSG00000197213|ENST00000586855|ZSCAN5B'] 54642 6073 LADPSAKAV True PC9_epitope_Rep1 870.4810822188999 870.47998993586 28.173 2 -0.25439988889623144 0.06219060540500898 0.9438714419765777 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2', 'ENSG00000173273|ENST00000310430|TNKS', 'nc|ENSG00000173273|O95271-2|TNKS'] 111951 7142 TLSDALRQW True NCI_RA007_Epitope_Rep1 1088.56145779792 1088.56036993586 31.771 2 -0.2544038961460599 0.06219060540500898 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1'] 131605 14336 VVYGGGAAEI True PC9_epitope_Rep2 934.4759968384599 934.47488993586 60.407 2 -0.25441471655812053 0.06219060540500898 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 72221 6075 MRVSDRQQL True PC9_epitope_Rep3 1131.5818759726699 1131.5802449037901 28.417 3 -0.2544203641109535 0.06219060540500898 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP', 'ATF7IP|p.G956Efs*30|1|0.19|ENSG00000171681|chr12:14475893-14475893|G/-|frameshift_variant', 'ENST00000537653.5_1_12:14576849-14628955:+|nuORF', 'ENST00000539659.5_1_12:14576849-14613468:+|nuORF', 'ENST00000541654.1_1_12:14538317-14613468:+|nuORF', 'ATF7IP|p.Q714Kfs*4|2|0.34|ENSG00000171681|chr12:14457272-14457272|C/-|frameshift_variant'] 38025 10637 HEIKSELL True PC9_epitope_Rep5 967.5338460677499 967.53274993586 45.903 2 -0.2544236701352861 0.06219060540500898 0.9438714419765777 ['nc|ENSG00000123415|Q53HV7-2|SMUG1'] 127342 4438 VQPEELRV True PC9_epitope_Rep5 968.5290950404798 968.52798993586 22.139 2 -0.2544339539470288 0.06219060540500898 0.9438714419765777 ['ENSG00000100288|ENST00000406938|CHKB', 'ENST00000481673.5_1_22:51020665-51021234:-|nuORF', 'nc|ENSG00000100288|Q9Y259-2|CHKB', 'ENST00000492556.5_1_22:51020829-51021234:-|nuORF'] 39949 6402 HQQSGSELAL True PC9_epitope_Rep4 1068.5199869087598 1068.5188899358602 31.716 2 -0.25445881531917713 0.06219060540500898 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 59534 4759 LGQLGEAVKR True NCI_RA007_Epitope_Rep5 1069.62439240765 1069.6232899358602 24.989 2 -0.25447941525991946 0.06219060540500898 0.9438714419765777 ['ENSG00000179954|ENST00000389623|SSC5D'] 122436 11825 VGSKTNLVTI True NCI_RA007_Epitope_Rep4 1030.60225998074 1030.60116993586 52.464 2 -0.2544853178800425 0.06222385186543221 0.9438714419765777 ['ENSG00000148488|ENST00000377602|ST8SIA6'] 95201 13478 SAAMPGASL True PC9_epitope_Rep1 803.38473930591 803.3841949679301 56.7 1 -0.25450482788336226 0.06222385186543221 0.9438714419765777 ['ENSG00000086062|ENST00000379731|B4GALT1', 'B4GALT1|p.A111Rfs*2|1|0.32|ENSG00000086062|chr9:33166839-33166840|-/G|frameshift_variant'] 140605 19509 YYMEKELANF True PC9_epitope_Rep2 1306.5903749676997 1306.58926993586 80.423 2 -0.2545121220565906 0.06222385186543221 0.9438714419765777 ['nc|ENSG00000105699|Q86X29-6|LSR', 'nc|ENSG00000105699|Q86X29-5|LSR', 'nc|ENSG00000105699|Q86X29-2|LSR', 'ENSG00000105699|ENST00000605618|LSR', 'nc|ENSG00000105699|Q86X29-3|LSR', 'nc|ENSG00000105699|Q86X29-4|LSR', 'nc|ENSG00000105699|Q86X29|LSR'] 137674 9821 YMDYRGYSY True H1975_Epitope_Rep3 1216.4859098991599 1216.48480993586 42.803 2 -0.25455238489983717 0.06223876219109775 0.9438714419765777 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'nc|ENSG00000131778|Q86WJ1-5|CHD1L', 'nc|ENSG00000131778|Q86WJ1-3|CHD1L'] 58253 10618 LETADGEPEP True H1975_Epitope_Rep1 1056.46113461996 1056.4600299358601 45.799 2 -0.25461251895900244 0.06223876219109775 0.9438714419765777 ['ENSG00000169006|ENST00000306928|NTSR2', 'NTSR2|p.L219Wfs*3|1|0.21|ENSG00000169006|chr2:11662213-11662214|GG/A|frameshift_variant'] 86444 8348 QQRKLFPHF True NCI_RA007_Epitope_Rep4 1199.65636124227 1199.65471490379 38.925 3 -0.25462838879545285 0.06223876219109775 0.9438714419765777 ['PIFO|p.P28T|1|0.31|ENSG00000173947|chr1:111346972-111346972|C/A|missense_variant', 'nc|ENSG00000173947|Q8TCI5-2|CIMAP3', 'ENST00000484512.1_1_1:111889274-111891329:+|nuORF', 'nc|ENSG00000173947|Q8TCI5-3|CIMAP3', 'ENSG00000173947|ENST00000369738|PIFO'] 6493 10548 APTLPGSAA True PC9_epitope_Rep3 783.41266830591 783.41156993586 45.517 2 -0.2546695461767329 0.062255953363031406 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 90582 6253 RKIATEKDFL True NCI_RA007_Epitope_Rep4 1219.6924719674698 1219.6908149037902 30.657 3 -0.25470882804883027 0.06228805015306216 0.9438714419765777 ['ENSG00000161057|ENST00000292644|PSMC2', 'nc|ENSG00000161057|P35998-2|PSMC2'] 30097 21708 FYPAIADLF True PC9_epitope_Rep6 1055.5327834385898 1055.5322749679299 96.386 1 -0.25478097740873656 0.06228805015306216 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4', 'JUP-LEPREL4|2|fusion'] 130857 17596 VVGGIYGV True PC9_epitope_Rep1 762.42759009406 762.4270449679301 72.476 1 -0.25480191963994236 0.06228805015306216 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2'] 137742 18150 YNILRGIGKL True PC9_epitope_Rep2 1145.6920780446499 1145.69044490379 75.116 3 -0.2549000435595692 0.06228805015306216 0.9438714419765777 ['ENST00000525494.1_1_11:70016194-70034107:+|nuORF', 'nc|ENSG00000131620|Q5XXA6-2|ANO1', 'nc|ENSG00000131620|Q5XXA6-4|ANO1', 'ENSG00000131620|ENST00000355303|ANO1', 'nc|ENSG00000131620|Q5XXA6-5|ANO1'] 136352 6257 YHDDTENSL True PC9_epitope_Rep3 1092.43598250128 1092.4348899358602 29.104 2 -0.2549167545116361 0.06230523884591414 0.9438714419765777 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 17965 14769 EIFHLNSV True PC9_epitope_Rep2 957.49198125577 957.49088993586 62.074 2 -0.25496179026085747 0.06231785773199655 0.9438714419765777 ['ENSG00000254245|ENST00000253812|PCDHGA3', 'nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3'] 81867 11578 PSKTIPGL True PC9_epitope_Rep1 811.4803539429099 811.47924993586 49.413 2 -0.2549704501668726 0.06231785773199655 0.9438714419765777 ['ENST00000399878.7_2_4:25750095-25759376:-|nuORF'] 70917 13774 M[Oxidation]ELITPISA True H1975_Epitope_Rep2 989.5103341222899 989.50922993586 58.127 2 -0.2549848902173582 0.06231785773199655 0.9438714419765777 ['THOC5-LYZ|1|fusion', 'ENST00000442555.5_1_22:29904448-29924274:-|nuORF', 'ENSG00000100296|ENST00000490103|THOC5'] 46574 9381 ITRPENISA True PC9_epitope_Rep5 999.53490869691 999.53380993586 41.039 2 -0.25498520154201587 0.06231785773199655 0.9438714419765777 ['ENSG00000137200|ENST00000373451|CMTR1'] 105024 4620 STIKEVAQA True PC9_epitope_Rep4 945.5131106231698 945.51200993586 24.281 2 -0.2549965803019798 0.06231785773199655 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 33625 23660 GLLWGLLA True PC9_epitope_Rep2 841.5061747679299 841.5056249679301 96.48 1 -0.2550393681354534 0.06235222961455985 0.9438714419765777 ['ENST00000295598.9_1_1:116941306-116941363:+|nuORF'] 137393 22082 YLLIPLLER True PC9_epitope_Rep2 1128.69068106232 1128.68958993586 90.41 2 -0.25505790095434216 0.06235222961455985 0.9438714419765777 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7'] 125682 19626 VMVLARTEL True PC9_epitope_Rep2 1030.58450174162 1030.5834099358601 80.876 2 -0.25506363550224365 0.06236941461090136 0.9438714419765777 ['nc|ENSG00000142303|Q9H324|ADAMTS10', 'ENSG00000142303|ENST00000597188|ADAMTS10', 'nc|ENSG00000142303|Q9H324-2|ADAMTS10'] 44038 18803 ILLANFLAQTE True H1975_Epitope_Rep1 1231.68123857743 1231.68014993586 78.405 2 -0.25517604316401027 0.06240378271387728 0.9438714419765777 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000586392.1_1_19:34884680-34890938:+|nuORF', 'CON__Q3ZBD7', 'LSM14A-GPI|1|fusion', 'LSM14A-GPI|2|fusion'] 16804 20415 EFLGAPVG True PC9_epitope_Rep1 788.4068546494799 788.40630496793 83.339 1 -0.2551899348444727 0.06240378271387728 0.9438714419765777 ['nc|ENSG00000123411|Q9H2S9-2|IKZF4', 'ENST00000551124.5_1_12:56418779-56429112:+|nuORF', 'ENSG00000123411|ENST00000547167|IKZF4'] 67753 6858 LTGSNHRK True NCI_RA007_Epitope_Rep1 911.4937125912701 911.49260993586 30.68 2 -0.25530245718481315 0.06243814829747462 0.9438714419765777 ['ENSG00000080200|ENST00000389622|CRYBG3'] 24243 13798 EYYDKHFTEF True PC9_epitope_Rep4 1377.5877321154096 1377.5860949037901 60.971 3 -0.25534343265552445 0.06243814829747462 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 59499 19947 LGPKVLLFL True PC9_epitope_Rep6 998.6528390016199 998.65174993586 89.386 2 -0.25541255946540037 0.06245533014459288 0.9438714419765777 ['ENST00000538107.5_1_12:8804361-8814700:-|nuORF', 'MFAP5|p.N79Kfs*9|1|0.33|ENSG00000197614|chr12:8651672-8651673|-/T|frameshift_variant', 'ENST00000537128.1_1_12:8806991-8814700:-|nuORF', 'ENST00000534833.5_1_12:8803096-8814700:-|nuORF', 'nc|ENSG00000197614|Q13361-2|MFAP5', 'ENSG00000197614|ENST00000359478|MFAP5'] 29463 6647 FVIATSTK True NCI_RA007_Epitope_Rep4 865.49091862661 865.48982993586 32.19 2 -0.2554768583240784 0.0625091628793432 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 33626 17401 GLLYHIVL True PC9_epitope_Rep1 926.55893861678 926.55784993586 71.734 2 -0.25557522174992925 0.06254466821821913 0.9438714419765777 ['ENST00000237937.7_1_9:74969735-74969897:-|nuORF'] 76646 22198 NTIEHLLPLFL True PC9_epitope_Rep4 1308.7441731871597 1308.7430699358601 93.63 2 -0.25558784331951656 0.06256184716877405 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF'] 128715 16386 VSPGLTPSL True PC9_epitope_Rep4 869.48583324617 869.48472993586 70.989 2 -0.2556552779895096 0.06257902548972898 0.9438714419765777 ['ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 133696 19767 WLCALALSL True PC9_epitope_Rep1 988.54157430048 988.54046993586 80.86 2 -0.25573216483601197 0.06263170432265039 0.9438714419765777 ['ENSG00000115884|ENST00000254351|SDC1'] 111060 10878 TLDTLSIYE True H1975_Epitope_Rep3 1053.52300660053 1053.52190993586 46.925 2 -0.2557789816536078 0.06263170432265039 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B', 'ENST00000468250.1_1_7:2406190-2406681:+|nuORF', 'ENST00000466199.1_1_7:2406190-2411546:+|nuORF'] 54699 7657 LAEEWDKMTMK True NCI_RA007_Epitope_Rep5 1380.6417589175596 1380.6406699358602 36.155 2 -0.25583553885214566 0.06264888041924727 0.9438714419765777 ['MAOB|p.N145K|1|0.42|ENSG00000069535|chrX:43802213-43802213|G/T|missense_variant'] 13806 7596 DQVANSAFVER True NCI_RA007_Epitope_Rep2 1234.59421447818 1234.59367496793 34.171 1 -0.2559510922351013 0.06270040493248072 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000530115.1_1_11:27910903-27911533:-|nuORF'] 2127 9327 AELRQAFLA True NCI_RA007_Epitope_Rep3 1017.5607295219298 1017.55962993586 43.785 2 -0.2559767913689427 0.06270040493248072 0.9438714419765777 ['ENST00000553597.5_1_15:25166388-25213181:+|nuORF', 'ENSG00000273173|ENST00000577949|SNURF', 'ENST00000400100.5_1_15:25165251-25213181:+|nuORF'] 128876 7374 VSSYQHTSVT True NCI_RA007_Epitope_Rep5 1107.51965255559 1107.5185499358602 35.044 2 -0.25600692853910534 0.06270040493248072 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF', 'ENST00000443317.1_1_20:32801869-32802238:-|nuORF'] 32544 6819 GGTEPVVE True NCI_RA007_Epitope_Rep4 786.37594844402 786.3753949679301 32.852 1 -0.2561262872263597 0.06273245268500027 0.9438714419765777 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 53670 6264 KWVDKSVSSL True PC9_epitope_Rep6 1147.62372370131 1147.62208490379 32.597 3 -0.2561293602136824 0.06273245268500027 0.9438714419765777 ['ENSG00000198932|ENST00000537097|GPRASP1'] 124081 25043 VKRRRRWYFRV True PC9_epitope_Rep1 1620.9589660370798 1620.9578699358601 101.24 2 -0.25613195511627324 0.06273245268500027 0.9438714419765777 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 26911 18551 FLGIYTVTV True PC9_epitope_Rep1 1011.5640835668701 1011.56298993586 76.146 2 -0.2562104602658281 0.06273245268500027 0.9438714419765777 ['OR8D4|p.G233Afs*13|1|0.15|ENSG00000181518|chr11:123907127-123907127|G/-|frameshift_variant', 'ENSG00000181518|ENST00000641687|OR8D4'] 25089 13275 FDIAEGVRTVL True NCI_RA007_Epitope_Rep3 1218.66083748602 1218.6597499358602 59.488 2 -0.2562659794458295 0.06274962441830641 0.9438714419765777 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 112714 12077 TPHFSGLAA True PC9_epitope_Rep5 899.4501164437899 899.44900993586 51.448 2 -0.25630370958733706 0.0627656456104353 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 74247 14838 NIDQDINNL True PC9_epitope_Rep6 1057.5040024914501 1057.50290993586 69.048 2 -0.2563421283712077 0.0627656456104353 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 74755 14560 NLLQQYKTL True PC9_epitope_Rep4 1119.62880908175 1119.6277099358601 63.92 2 -0.2563830913178053 0.06279883488742741 0.9438714419765777 ['nc|ENSG00000155755|Q96Q45-4|TMEM237', 'nc|ENSG00000155755|Q96Q45-2|TMEM237', 'ENSG00000155755|ENST00000409883|TMEM237', 'nc|ENSG00000155755|Q96Q45-5|TMEM237', 'nc|ENSG00000155755|Q96Q45-3|TMEM237'] 126903 7656 VPTVTTSSA True PC9_epitope_Rep5 861.44436235701 861.44326993586 34.394 2 -0.256390157261012 0.06279883488742741 0.9438714419765777 ['ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1'] 65470 14602 LSFFMARVFMR True PC9_epitope_Rep5 1403.7206183749497 1403.71897490379 61.168 3 -0.25643602473616023 0.06279883488742741 0.9438714419765777 ['ENSG00000198856|ENST00000361564|OSTC', 'nc|ENSG00000198856|Q9NRP0-2|OSTC'] 71633 14989 MLPHSSFSL True PC9_epitope_Rep2 1017.4953523840501 1017.49424993586 62.912 2 -0.2564442617524124 0.06281485280917401 0.9438714419765777 ['ENST00000235382.6_1_1:192781079-192781220:+|nuORF'] 59323 18779 LGILSEGQFGI True PC9_epitope_Rep5 1132.61282466444 1132.61172993586 77.246 2 -0.25644880210578835 0.06281485280917401 0.9438714419765777 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 14149 15989 DSILVNTNLRA True NCI_RA007_Epitope_Rep1 1214.66190011518 1214.66080993586 66.295 2 -0.2564819350152658 0.06284918759502482 0.9438714419765777 ['nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2'] 45654 12484 ISINFWVP True H1975_Epitope_Rep2 974.5225531080599 974.52144993586 53.111 2 -0.25651998985391217 0.06284918759502482 0.9438714419765777 ['ENSG00000156886|ENST00000389202|ITGAD'] 41301 17566 IAHEIYQKILS True PC9_epitope_Rep5 1313.7343367794501 1313.73268490379 72.575 3 -0.25655362616717137 0.06286635404454866 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 37148 4364 GVTFPCHFARR True NCI_RA007_Epitope_Rep3 1289.64514493557 1289.64349490379 23.931 3 -0.2566962482930167 0.0629143924685886 0.9438714419765777 ['ENST00000397501.5_1_8:27316032-27316239:+|nuORF'] 17120 12078 EGSTQPLLS True PC9_epitope_Rep4 930.46582607758 930.4652749679301 54.263 1 -0.2567023034307166 0.0629143924685886 0.9438714419765777 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 73837 7775 NHEDKIRVVL True PC9_epitope_Rep4 1221.6829699129298 1221.68131490379 37.303 3 -0.25672587810683334 0.0629143924685886 0.9438714419765777 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1'] 100079 9542 SLKRRFYFKE True NCI_RA007_Epitope_Rep1 1372.7615545868 1372.7599049037901 41.114 3 -0.25678433927845895 0.0629143924685886 0.9438714419765777 ['ENST00000486187.5_1_10:43078317-43078551:-|nuORF'] 9200 21269 AVPEVAVYL True PC9_epitope_Rep2 959.5327834385898 959.53168993586 87.271 2 -0.2568506873453633 0.0629143924685886 0.9438714419765777 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 46499 15874 ITPGGFSSV True PC9_epitope_Rep1 863.43888305375 863.43833496793 65.868 1 -0.25690271872541254 0.0629143924685886 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 55081 19592 LALLAALL True H1975_Epitope_Rep2 796.54222592348 796.54167496793 81.291 1 -0.2569120232192447 0.06296703296703297 0.9438714419765777 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1', 'ROR1-PGM1|1|fusion'] 120385 11644 VFRYNSSL True PC9_epitope_Rep3 984.50288029264 984.50178993586 49.803 2 -0.2569731994813275 0.06296703296703297 0.9438714419765777 ['nc|ENSG00000186272|P17021-3|ZNF17', 'ENST00000602050.1_1_19:57930944-57932846:+|nuORF', 'nc|ENSG00000186272|P17021|ZNF17', 'ENSG00000186272|ENST00000307658|ZNF17'] 67765 13853 LTGTWTSV True PC9_epitope_Rep6 863.43888305375 863.43778993586 65.105 2 -0.25711381780583187 0.06303913847731726 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 90658 2598 RKKYMRWMNHK True NCI_RA007_Epitope_Rep5 1576.82312638088 1576.82093987172 14.711 4 -0.25719093156336936 0.06307345750233503 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 19747 15000 ELSRSLSVGL True PC9_epitope_Rep6 1059.59242357303 1059.5913299358601 69.719 2 -0.2572179657592021 0.06307345750233503 0.9438714419765777 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB'] 13391 10163 DNIQTVKRLRT True PC9_epitope_Rep1 1342.7680965192199 1342.76698993586 43.968 2 -0.2572201813755503 0.06308946067209963 0.9438714419765777 79204 20830 PGFPQIVNS True PC9_epitope_Rep2 957.4919812557699 957.49088993586 85.566 2 -0.2572221077924156 0.06308946067209963 0.9438714419765777 ['ENSG00000128536|ENST00000317716|CDHR3'] 83899 6778 QEIQCEKAQAK True H1975_Epitope_Rep1 1274.6288857347397 1274.6277899358602 31.115 2 -0.2573131295904722 0.06310430706123644 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'nc|ENSG00000136811|Q5BJF6-2|ODF2', 'nc|ENSG00000136811|Q5BJF6-3|ODF2', 'nc|ENSG00000136811|Q5BJF6-9|ODF2', 'nc|ENSG00000136811|Q5BJF6-8|ODF2', 'nc|ENSG00000136811|Q5BJF6-5|ODF2'] 68388 11676 LTSSSPIPR True PC9_epitope_Rep2 956.52909504048 956.52798993586 50.243 2 -0.25731388776517533 0.06310430706123644 0.9438714419765777 ['nc|ENSG00000165806|P55210-2|CASP7'] 46981 20206 IVPDLDLQQV True PC9_epitope_Rep4 1138.62338934814 1138.6222899358602 85.86 2 -0.2573336442632075 0.06310430706123644 0.9438714419765777 ['ENSG00000159256|ENST00000400485|MORC3'] 54340 9170 KYQEVTNNL True PC9_epitope_Rep1 1107.5560380643099 1107.55547496793 40.122 1 -0.2573733871609041 0.06312030763596412 0.9438714419765777 ['nc|ENSG00000135387|Q14444-2|CAPRIN1', 'CAPRIN1|p.P694Qfs*10|1|0.44|ENSG00000135387|chr11:34099314-34099314|C/-|frameshift_variant', 'ENSG00000135387|ENST00000341394|CAPRIN1'] 19491 8042 ELQGEEKLIHS True H1975_Epitope_Rep1 1281.65648038157 1281.65538993586 35.879 2 -0.25738391341051114 0.06312030763596412 0.9438714419765777 ['ENST00000568315.1_1_16:68318535-68336298:-|nuORF'] 102638 14477 SQDEQNELLK True PC9_epitope_Rep3 1202.5778957076998 1202.5762649037902 60.794 3 -0.2575284654820697 0.06320955101442906 0.9438714419765777 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128441244-128446479:+|nuORF'] 31176 9634 GDFC[Carbamidomethyl]IQVGR True NCI_RA007_Epitope_Rep2 1050.49166426537 1050.49056993586 42.089 2 -0.25755189133576095 0.06320955101442906 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'ENST00000511355.5_1_17:49238508-49238634:+|nuORF', 'NMT1-NME1|1|fusion'] 31477 6788 GEELARLRSV True NCI_RA007_Epitope_Rep2 1128.62512068364 1128.62402993586 31.02 2 -0.2576359105437042 0.06322554656315231 0.9438714419765777 ['ENSG00000165105|ENST00000376447|RASEF', 'nc|ENSG00000165105|Q8IZ41-2|RASEF'] 25252 12214 FEDENFILK True NCI_RA007_Epitope_Rep2 1153.5655401188499 1153.5649749679299 52.108 1 -0.25767019634335975 0.06322554656315231 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF'] 100878 6596 SLSGPELPPP True H1975_Epitope_Rep2 992.51786165044 992.51676993586 30.282 2 -0.25774782568008153 0.06324269889224572 0.9438714419765777 ['RASSF5|p.L381*|2|0.24|ENSG00000266094|chr1:206586861-206586861|C/-|frameshift_variant', 'ENSG00000266094|ENST00000579436|RASSF5', 'nc|ENSG00000266094|Q8WWW0-3|RASSF5'] 45679 6699 ISKQYHQEI True PC9_epitope_Rep1 1144.5876725457601 1144.58602490379 30.57 3 -0.25780957288490797 0.06329299328072649 0.9438714419765777 ['ENSG00000033030|ENST00000633063|ZCCHC8', 'ENST00000536306.5_1_12:122967212-122983396:-|nuORF', 'ENST00000540586.1_1_12:122967996-122984530:-|nuORF', 'ENST00000543897.5_2_12:122967996-122983396:-|nuORF'] 24296 14322 FACHIGNYSL True PC9_epitope_Rep1 1123.51206507735 1123.5109699358602 59.913 2 -0.25784429869627096 0.06329299328072649 0.9438714419765777 ['ENST00000464101.2_1_3:132379321-132384968:+|nuORF'] 74960 19623 NLVEELQSV True PC9_epitope_Rep5 1029.5342399905699 1029.5331499358601 80.532 2 -0.25787325290977514 0.06329299328072649 0.9438714419765777 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-2|ADGRV1', 'ADGRV1|p.G5435V|1|0.12|ENSG00000164199|chr5:90823532-90823532|G/T|missense_variant'] 101863 21285 SPLAVFGL True PC9_epitope_Rep1 802.45889022234 802.45778993586 86.698 2 -0.2578759881678959 0.06329299328072649 0.9438714419765777 ['ATG4C|p.L211V|2|0.41|ENSG00000125703|chr1:62819241-62819241|C/G|missense_variant'] 118753 10970 VEDLRWFRA True H1975_Epitope_Rep3 1190.6196413803798 1190.61799490379 47.286 3 -0.2579734429571988 0.06330782468602394 0.9438714419765777 ['nc|ENSG00000100266|Q9UNF0-2|PACSIN2', 'ENSG00000100266|ENST00000263246|PACSIN2'] 64288 24464 LQLSLPLFL True PC9_epitope_Rep1 1042.64266824074 1042.6415699358602 98.943 2 -0.2579823139845468 0.06330782468602394 0.9438714419765777 ['ENST00000495882.1_1_7:99764639-99764801:-|nuORF'] 68146 8619 LTPQMQPPP True H1975_Epitope_Rep2 1007.5110024481899 1007.50990993586 38.109 2 -0.25800290234833406 0.06330782468602394 0.9438714419765777 ['ENST00000253031.6_1_19:11038566-11039058:-|nuORF'] 35715 9966 GTSFSAVPP True H1975_Epitope_Rep1 861.4232329896099 861.42212993586 43.271 2 -0.25806791680387287 0.06334328030316899 0.9438714419765777 ['ENSG00000110427|ENST00000658780|KIAA1549L'] 76688 6520 NTLGISSIGP True NCI_RA007_Epitope_Rep5 957.51311062317 957.51200993586 31.744 2 -0.2580973950406214 0.06335810786072567 0.9438714419765777 ['ENST00000344096.3_1_12:68055799-68055877:+|nuORF'] 9115 20583 AVLIDFSPLT True PC9_epitope_Rep3 1074.5961119711399 1074.5950099358602 84.438 2 -0.2581090705068048 0.06335810786072567 0.9438714419765777 ['ENST00000429172.5_2_2:171627798-171634191:+|nuORF'] 57332 13090 LEGSGTIIA True H1975_Epitope_Rep1 859.46509780159 859.46454496793 55.439 1 -0.25811693026338517 0.06335810786072567 0.9438714419765777 ['ENST00000601033.1_1_19:46531262-46531590:+|nuORF'] 140887 17066 YYTTPIYRF True PC9_epitope_Rep6 1222.60225998074 1222.60116993586 78.209 2 -0.25822061990262124 0.06343017189301993 0.9438714419765777 ['ENSG00000104957|ENST00000221554|YJU2B'] 99319 10386 SLDLTTLVP True H1975_Epitope_Rep2 957.53826274185 957.53716993586 44.961 2 -0.25833568709297033 0.06348392765614704 0.9438714419765777 ['ENST00000570036.5_1_16:84513521-84531159:-|nuORF', 'ENSG00000140950|ENST00000343629|MEAK7'] 4921 5468 ALGTESPR True PC9_epitope_Rep1 829.4293809992099 829.42828993586 25.863 2 -0.2585033305254241 0.06353768145124385 0.9438714419765777 ['ENSG00000167194|ENST00000681219|C16orf92', 'nc|ENSG00000167194|Q96LL3|FIMP'] 73420 14104 NESGELVAI True PC9_epitope_Rep5 930.4658260775799 930.46472993586 59.261 2 -0.25852480502824365 0.06355249670522771 0.9438714419765777 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 137394 21388 YLLIPLLER True PC9_epitope_Rep4 1128.69068106232 1128.68958993586 90.437 2 -0.2585429397725511 0.06355249670522771 0.9438714419765777 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7'] 115228 19841 TVCRRLSAW True PC9_epitope_Rep5 1090.5705830129798 1090.56948993586 81.366 2 -0.25855727562077463 0.06355249670522771 0.9438714419765777 ['ENST00000228741.7_1_12:96588285-96617411:+|nuORF'] 72820 8979 NAKQWQSV True PC9_epitope_Rep5 959.4824792012299 959.48138993586 39.481 2 -0.2586003103130206 0.06356847384412637 0.9438714419765777 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF'] 76141 7210 NRQTWRWHQYR True NCI_RA007_Epitope_Rep1 1629.80252496533 1629.80086490379 32.035 3 -0.2586167580442793 0.06356847384412637 0.9438714419765777 ['ENSG00000186143|ENST00000335524|PRR30'] 82513 16661 PVEVQEVSL True PC9_epitope_Rep6 998.5284263341398 998.5273299358599 76.556 2 -0.25862981549892944 0.06359926060140193 0.9438714419765777 ['nc|ENSG00000141425|Q96P16-3|RPRD1A', 'ENSG00000141425|ENST00000399022|RPRD1A'] 110352 14910 TILDAIKNI True PC9_epitope_Rep2 999.59644632431 999.59534993586 62.615 2 -0.258632507134742 0.06359926060140193 0.9438714419765777 ['ENSG00000221944|ENST00000408957|TIGD1'] 111283 7114 TLHELLERI True NCI_RA007_Epitope_Rep5 1122.6397081186199 1122.63805490379 34.044 3 -0.25863374288593044 0.06359926060140193 0.9438714419765777 ['SASH3|p.L266M|1|0.44|ENSG00000122122|chrX:129792831-129792831|C/A|missense_variant', 'ENSG00000122122|ENST00000356892|SASH3'] 5103 14843 ALLSTALGKP True PC9_epitope_Rep2 969.5858816406098 969.58478993586 62.358 2 -0.2586349861371522 0.06359926060140193 0.9438714419765777 ['ENST00000489330.6_1_X:11166772-11683098:-|nuORF'] 28764 3219 FTATCAGR True NCI_RA007_Epitope_Rep2 825.3803226318098 825.3792299358599 17.172 2 -0.2586590197954004 0.06359926060140193 0.9438714419765777 ['ENST00000500813.6_1_4:183812171-183812324:-|nuORF'] 59427 10262 LGLTLGTMWLC True H1975_Epitope_Rep3 1206.61408761774 1206.61298993586 44.522 2 -0.25871018804501056 0.06361523398180853 0.9438714419765777 ['ENSG00000145626|ENST00000274278|UGT3A1'] 85928 18745 QNVSTTVIV True PC9_epitope_Rep4 959.52876068731 959.52821496793 80.186 1 -0.25872427419547844 0.06361523398180853 0.9438714419765777 ['ENSG00000197410|ENST00000357232|DCHS2', 'nc|ENSG00000197410|Q6V1P9-5|DCHS2'] 97112 11457 SFDRKWGQI True PC9_epitope_Rep1 1135.57744221523 1135.5757949037902 48.947 3 -0.2587878082538593 0.06368610801017514 0.9438714419765777 ['ENSG00000093167|ENST00000336686|LRRFIP2'] 62141 23312 LLPECFYSF True PC9_epitope_Rep5 1117.5154191222898 1117.5143299358601 94.649 2 -0.25881551464861474 0.06368610801017514 0.9438714419765777 ['nc|ENSG00000104413|Q6NXG1-2|ESRP1', 'nc|ENSG00000104413|Q6NXG1-5|ESRP1', 'nc|ENSG00000104413|Q6NXG1-4|ESRP1', 'nc|ENSG00000104413|Q6NXG1-3|ESRP1', 'ENSG00000104413|ENST00000433389|ESRP1', 'ENST00000522920.1_1_8:95655542-95658518:+|nuORF'] 113145 9920 TQAQGLTNV True PC9_epitope_Rep3 930.4770594676199 930.47596993586 43.114 2 -0.25889050826816634 0.06372037697868058 0.9438714419765777 ['nc|ENSG00000130731|Q96S19-6|METTL26', 'ENSG00000130731|ENST00000301686|METTL26', 'nc|ENSG00000130731|Q96S19-4|METTL26', 'ENST00000448973.6_1_16:685482-685995:-|nuORF'] 23547 14368 EWTEDDELP True NCI_RA007_Epitope_Rep5 1132.4560492395199 1132.4549499358602 61.952 2 -0.25890429158226225 0.06372037697868058 0.9438714419765777 ['ENSG00000124743|ENST00000370905|KLHL31'] 40282 8658 HRPELIDYGK True PC9_epitope_Rep5 1226.64077074778 1226.6391149037902 38.246 3 -0.2589060918183408 0.06373517786561265 0.9438714419765777 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000554508.5_1_14:69367621-69387744:-|nuORF'] 100685 10936 SLQYSMTYLY True H1975_Epitope_Rep2 1267.5794759308299 1267.57836993586 47.098 2 -0.25892001894784855 0.06373517786561265 0.9438714419765777 ['PXMP4|p.S184Y|1|0.12|ENSG00000101417|chr20:33707794-33707794|G/T|missense_variant'] 4847 21879 ALFGALFLA True PC9_epitope_Rep6 921.5323895157699 921.53128993586 97.058 2 -0.2589678999821906 0.06373517786561265 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 98915 21211 SIYDFYFI True PC9_epitope_Rep3 1066.50114895714 1066.50004993586 86.878 2 -0.2590168272276562 0.06376944190301921 0.9438714419765777 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'ENST00000572640.5_1_16:21008599-21073979:-|nuORF'] 63364 5220 LPEVGAKG True H1975_Epitope_Rep1 769.4334037504899 769.43230993586 25.142 2 -0.2590208367952857 0.06376944190301921 0.9438714419765777 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS', 'ENST00000489655.1_1_2:74689957-74690534:-|nuORF'] 118039 7120 VATFSSPEQK True H1975_Epitope_Rep3 1092.54513902744 1092.5440499358601 32.357 2 -0.2590407976248089 0.06378657298128122 0.9438714419765777 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 78036 4853 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 24.037 2 -0.259209680946532 0.06385859620873893 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 88682 25411 RCCLLRHLLRL True PC9_epitope_Rep1 1394.8114990680199 1394.8104099358602 102.72 2 -0.2592749511634847 0.06391231954330046 0.9438714419765777 ['nc|ENSG00000162891|Q9NYY1-2|IL20', 'ENSG00000162891|ENST00000367098|IL20'] 74613 7532 NLDSQRLQY True H1975_Epitope_Rep3 1135.56218607391 1135.56108993586 33.954 2 -0.25934606729056586 0.06392944706700333 0.9438714419765777 ['nc|ENSG00000151116|Q8IX04-4|UEVLD', 'nc|ENSG00000151116|Q8IX04-3|UEVLD', 'nc|ENSG00000151116|Q8IX04-2|UEVLD', 'nc|ENSG00000151116|Q8IX04-6|UEVLD', 'ENSG00000151116|ENST00000396197|UEVLD', 'nc|ENSG00000151116|Q8IX04-7|UEVLD'] 80363 12669 PLGPSPLAS True PC9_epitope_Rep2 837.45961849833 837.45852993586 54.038 2 -0.25936427569580955 0.06394657396395573 0.9438714419765777 ['ENST00000473583.1_1_3:52324300-52324483:+|nuORF'] 99744 4275 SLGKHGGQGVP True NCI_RA007_Epitope_Rep4 1035.5461420869497 1035.54504993586 22.778 2 -0.25943502626951004 0.06403219904866447 0.9438714419765777 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|19|2|sense'] 61609 7922 LLGSAHEV True PC9_epitope_Rep5 824.4392174069201 824.43812993586 35.412 2 -0.2594365879275419 0.06403219904866447 0.9438714419765777 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 118058 21524 VATLLLQL True PC9_epitope_Rep3 869.55860426361 869.55750993586 88.086 2 -0.2595208031569132 0.06403219904866447 0.9438714419765777 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8'] 45165 19785 IRDNFVIVY True PC9_epitope_Rep5 1137.61824439805 1137.61767496793 81.149 1 -0.2595810097382024 0.06403219904866447 0.9438714419765777 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 54895 13869 LAGPAELL True H1975_Epitope_Rep1 782.4538048418999 782.4532549679301 58.496 1 -0.2595961745952983 0.06403219904866447 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 94327 9766 RWWFRRLFLIF True NCI_RA007_Epitope_Rep2 1638.9299573245796 1638.9288699358601 42.608 2 -0.2597103517334535 0.06406410068783844 0.9438714419765777 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 96578 8871 SELRAFVA True H1975_Epitope_Rep3 891.4814165720699 891.48030993586 39.125 2 -0.25973335177416956 0.06406410068783844 0.9438714419765777 ['ENSG00000118655|ENST00000650450|DCLRE1B', 'ENST00000466480.1_1_1:114448336-114454776:+|nuORF'] 29775 16931 FVSLPTPVLPR True NCI_RA007_Epitope_Rep1 1224.7230438197598 1224.72194993586 69.985 2 -0.2597610382447805 0.06406410068783844 0.9438714419765777 ['ENSG00000173988|ENST00000595396|LRRC63'] 8410 5248 ATQNSELIK True NCI_RA007_Epitope_Rep4 1002.5345743437399 1002.53346993586 26.727 2 -0.25976491675465957 0.06406410068783844 0.9438714419765777 ['ENSG00000198939|ENST00000361362|ZFP2'] 38210 5688 HETPPPLAA True H1975_Epitope_Rep2 931.4763311916299 931.4752299358599 26.877 2 -0.25980979364649304 0.06407770542181898 0.9438714419765777 ['ENST00000489567.5_1_6:7310225-7313369:-|nuORF'] 46545 12231 ITQTNNQLI True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 52.076 2 -0.2598344477221523 0.06407770542181898 0.9438714419765777 ['ENSG00000205301|ENST00000511113|MGAT4D'] 84002 5523 QEMSRC[Carbamidomethyl]KT True H1975_Epitope_Rep2 1038.4586498849299 1038.45754993586 26.252 2 -0.25983713371670175 0.06407770542181898 0.9438714419765777 ['nc|ENSG00000139973|Q17RD7-3|SYT16', 'nc|ENSG00000139973|Q17RD7-2|SYT16', 'ENSG00000139973|ENST00000683842|SYT16'] 78881 20585 PETLKFTSI True PC9_epitope_Rep4 1034.56481184286 1034.56370993586 87.332 2 -0.2598785267453076 0.06407770542181898 0.9438714419765777 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 125206 11330 VLQLKQDI True PC9_epitope_Rep5 955.57023157647 955.56912993586 48.575 2 -0.25993680171260275 0.06409130816505706 0.9438714419765777 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-2|EPB41L5'] 119301 12896 VELMKFVSKV True H1975_Epitope_Rep1 1178.67331674602 1178.67220993586 54.676 2 -0.2599437407171064 0.06409130816505706 0.9438714419765777 ['ENSG00000124103|ENST00000371328|FAM209A'] 75332 8521 NPYYGGESA True PC9_epitope_Rep2 956.3875757568799 956.3870249679301 38.138 1 -0.2600011548696583 0.06409130816505706 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 35919 18990 GVALLNFYNMP True PC9_epitope_Rep6 1237.61653014589 1237.6154299358602 85.688 2 -0.26000751403593453 0.06409130816505706 0.9438714419765777 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-4|CRB1', 'nc|ENSG00000134376|P82279-2|CRB1', 'nc|ENSG00000134376|P82279-5|CRB1'] 23322 15575 EVSWPDSWPVP True PC9_epitope_Rep1 1297.59790287629 1297.5968099358602 64.732 2 -0.26007894750589794 0.06414500759058402 0.9438714419765777 ['ENST00000498157.1_1_1:109813918-109815451:+|nuORF'] 9673 14861 AYGSAVLTF True NCI_RA007_Epitope_Rep5 927.47018318203 927.46908993586 63.832 2 -0.2601255739197555 0.06416095107453132 0.9438714419765777 ['nc|ENSG00000179698|A6NE52-2|WDR97', 'ENSG00000179698|ENST00000323662|WDR97'] 6245 11802 APRLLLAA True PC9_epitope_Rep6 823.5279728416699 823.52686993586 56.586 2 -0.2602392442875703 0.06416095107453132 0.9438714419765777 ['ENST00000552138.5_1_14:105821400-105836438:+|nuORF'] 910 16222 ADPSLISWDEP True H1975_Epitope_Rep2 1228.5611830143998 1228.56008993586 67.608 2 -0.26028574612684224 0.06417571966787373 0.9438714419765777 ['ENSG00000133056|ENST00000684373|PIK3C2B', 'PIK3C2B|p.R970Pfs*17|1|0.25|ENSG00000133056|chr1:204443543-204443556|CAGATACTGGTAGC/-|frameshift_variant', 'PIK3C2B|p.R287Pfs*38|4|0.12|ENSG00000133056|chr1:204468943-204468944|-/G|frameshift_variant'] 72719 12638 MYQEHINEI True PC9_epitope_Rep3 1175.52810906431 1175.5270099358602 53.635 2 -0.260285862127376 0.06417571966787373 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'POLE|p.D1405N|1|0.22|ENSG00000177084|chr12:132643914-132643914|C/T|missense_variant'] 101689 7755 SPGADAELP True H1975_Epitope_Rep3 855.3974121645899 855.39686496793 34.814 1 -0.260321664724918 0.06417571966787373 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 123006 5008 VGWSSRRNLDT True NCI_RA007_Epitope_Rep3 1289.6476470333698 1289.64601490379 26.696 3 -0.2603496373338006 0.06419283454342618 0.9438714419765777 ['ENST00000490021.2_1_1:110230443-110251195:+|nuORF'] 107234 10799 SYPRRFSTL True PC9_epitope_Rep1 1125.59309227937 1125.59143490379 46.425 3 -0.26048687307516566 0.06426481346013167 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 110772 23599 TKLLHKVRRRL True NCI_RA007_Epitope_Rep4 1418.93101995374 1418.9299299358602 102.37 2 -0.26068904851309577 0.06429903807468637 0.9438714419765777 ['DPP6|p.E675K|1|0.17|ENSG00000130226|chr7:154876045-154876045|G/A|missense_variant'] 30987 4905 GATHVERCMVR True NCI_RA007_Epitope_Rep2 1257.60704517469 1257.6053849037899 23.701 3 -0.26072765983662644 0.06429903807468637 0.9438714419765777 ['nc|ENSG00000145016|Q92622-3|RUBCN'] 106220 17854 SVPNKDVFQEL True PC9_epitope_Rep5 1274.65066672514 1274.6495699358602 73.694 2 -0.2607566528564055 0.06431614944315418 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 61384 20630 LLELGEDAKLP True PC9_epitope_Rep1 1196.66525416012 1196.66414993586 84.173 2 -0.2607881631965713 0.0643191458241919 0.9438714419765777 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA', 'nc|ENSG00000179583|P33076-4|CIITA', 'ENST00000570546.5_1_16:10971115-11002148:+|nuORF', 'nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 140112 21343 YVPPELITL True PC9_epitope_Rep4 1043.59029831471 1043.58977496793 90.263 1 -0.26081934639613646 0.0643191458241919 0.9438714419765777 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 129608 10349 VTGSWDLGY True H1975_Epitope_Rep1 996.4552613938799 996.45416993586 44.755 2 -0.26082604276943144 0.0643191458241919 0.9438714419765777 ['ENST00000261489.6_2_13:45008100-45008229:-|nuORF'] 14387 7226 DTETKQQY True H1975_Epitope_Rep2 1011.4509042894299 1011.44980993586 32.729 2 -0.2608515506193402 0.0643191458241919 0.9438714419765777 ['ENSG00000132953|ENST00000255305|XPO4'] 67762 14775 LTGTWTSV True PC9_epitope_Rep4 863.43888305375 863.43778993586 64.764 2 -0.260857518900019 0.0643191458241919 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 83721 7370 QEAPPVPGA True H1975_Epitope_Rep2 864.4341320264798 864.4335849679301 33.288 1 -0.26086548280098104 0.0643191458241919 0.9438714419765777 ['ENST00000496125.2_2_19:45596475-45612027:+|nuORF', 'ENSG00000104866|ENST00000221462|PPP1R37'] 107479 4275 TAAEKTATDK True NCI_RA007_Epitope_Rep4 1034.5244035828598 1034.5233099358602 22.778 2 -0.260878247883861 0.0643191458241919 0.9438714419765777 ['ENSG00000124383|ENST00000244230|MPHOSPH10'] 91396 13216 RNDGIALQI True PC9_epitope_Rep4 998.5508931142199 998.5503449679301 58.732 1 -0.26089428220738425 0.0643191458241919 0.9438714419765777 ['ENST00000514109.1_1_4:68567136-68586253:+|nuORF', 'ENST00000498917.2_1_4:68567013-68586253:+|nuORF'] 870 8322 ADLAGELR True NCI_RA007_Epitope_Rep1 843.4450310633499 843.44392993586 36.371 2 -0.2608970337640623 0.0643191458241919 0.9438714419765777 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 59284 16030 LGGVGSLSL True PC9_epitope_Rep6 801.4596184983301 801.4590749679301 73.984 1 -0.26093372342245047 0.0643191458241919 0.9438714419765777 ['ENST00000409106.5_2_2:114513945-114514152:-|nuORF'] 68061 8820 LTNLTENGL True H1975_Epitope_Rep3 973.50802524273 973.50692993586 38.933 2 -0.2609684656549133 0.0643191458241919 0.9438714419765777 ['ENST00000413422.4_1_19:44085374-44085893:+|nuORF', 'nc|ENSG00000234465|A6NC86-4|PINLYP', 'ENSG00000234465|ENST00000599207|PINLYP', 'nc|ENSG00000234465|A6NC86-2|PINLYP'] 73932 14310 NHIEPLKIQL True PC9_epitope_Rep6 1203.6975573479099 1203.69592490379 66.941 3 -0.2609935612414633 0.0643191458241919 0.9438714419765777 ['nc|ENSG00000176890|P04818-2|TYMS', 'ENSG00000176890|ENST00000323274|TYMS', 'nc|ENSG00000176890|P04818-3|TYMS', 'ENST00000581920.1_1_18:667730-672994:+|nuORF'] 42185 9665 IEGASIVDG True H1975_Epitope_Rep2 859.4287122928699 859.42816496793 42.158 1 -0.2610060002385469 0.0643191458241919 0.9438714419765777 ['ENSG00000136011|ENST00000388887|STAB2', 'STAB2|p.G1653Vfs*2|1|0.09|ENSG00000136011|chr12:103728870-103728870|G/-|frameshift_variant'] 136764 19024 YIPTELDQV True PC9_epitope_Rep4 1076.53899101784 1076.53847496793 81.267 1 -0.2610377808656387 0.06433154786932598 0.9438714419765777 ['ENSG00000149100|ENST00000531120|EIF3M'] 111532 16479 TLLSEDMRK True PC9_epitope_Rep5 1091.5644945730298 1091.5633899358602 68.384 2 -0.26106772897842256 0.06433154786932598 0.9438714419765777 ['ENSG00000154781|ENST00000383794|CCDC174', 'ENST00000465759.1_1_3:14693292-14708492:+|nuORF'] 54706 6601 LAEGTAIK True PC9_epitope_Rep1 801.4596184983299 801.45852993586 30.193 2 -0.26118824897361265 0.06433154786932598 0.9438714419765777 ['ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-3|UGDH', 'nc|ENSG00000109814|O60701-2|UGDH'] 133419 25057 WFWKLVPARYR True PC9_epitope_Rep2 1520.8404736138398 1520.83936993586 102.05 2 -0.26119252289159683 0.06433154786932598 0.9438714419765777 ['nc|ENSG00000118200|Q08AD1|CAMSAP2'] 1841 11907 AEIEDPPIP True NCI_RA007_Epitope_Rep4 979.4862271689899 979.48512993586 52.802 2 -0.2612183683453276 0.06433154786932598 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 17119 13064 EGSTQPLLS True PC9_epitope_Rep1 930.46582607758 930.4652749679301 55.119 1 -0.26141038512417164 0.06440349530181712 0.9438714419765777 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 105771 22135 SVIDVDHFFL True PC9_epitope_Rep2 1190.5971746003 1190.5960699358602 90.621 2 -0.2614221671383617 0.06443416747399784 0.9438714419765777 ['ENSG00000151881|ENST00000397080|TMEM267'] 81019 9566 PNTVISQEP True PC9_epitope_Rep3 983.4923751785899 983.49126993586 41.747 2 -0.26143462418133256 0.06443416747399784 0.9438714419765777 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 19398 13510 ELPEWSEGY True H1975_Epitope_Rep3 1108.4713053808398 1108.47020993586 57.244 2 -0.2614407184123833 0.06443416747399784 0.9438714419765777 ['ENSG00000143157|ENST00000367876|POGK'] 58639 7637 LFGGLCFRFRD True H1975_Epitope_Rep1 1329.6652116738098 1329.66410993586 34.361 2 -0.261460919795812 0.06443416747399784 0.9438714419765777 ['nc|ENSG00000102226|P51784|USP11'] 5382 13205 ALVDKRVAP True PC9_epitope_Rep1 967.5814649665099 967.58036993586 55.656 2 -0.2615216949048968 0.06443416747399784 0.9438714419765777 ['nc|ENSG00000134444|Q9P260|RELCH', 'ENST00000587198.1_1_18:59947574-59954602:+|nuORF'] 59282 18292 LGGVGSLSL True PC9_epitope_Rep1 801.4596184983301 801.4590749679301 75.149 1 -0.2615704923335758 0.06444891244745019 0.9438714419765777 ['ENST00000409106.5_2_2:114513945-114514152:-|nuORF'] 42111 12418 IEEMRRMP True NCI_RA007_Epitope_Rep5 1060.5157705587999 1060.5146699358602 54.422 2 -0.2615898913467988 0.06444891244745019 0.9438714419765777 ['nc|ENSG00000227345|Q86W56-4|PARG', 'nc|ENSG00000227345|Q86W56-3|PARG', 'nc|ENSG00000227345|Q86W56-2|PARG', 'ENSG00000227345|ENST00000616448|PARG'] 47757 8278 IYQRDPLKL True NCI_RA007_Epitope_Rep4 1144.6604435631998 1144.65880490379 38.65 3 -0.26162207525285786 0.06444891244745019 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'ENST00000555641.1_1_12:57499966-57502061:-|nuORF'] 95305 6656 SAEVELQAK True NCI_RA007_Epitope_Rep4 973.5080252427299 973.50692993586 32.224 2 -0.26177647477780036 0.06450256803933395 0.9438714419765777 ['ENSG00000171051|ENST00000304748|FPR1'] 43505 16093 IIAPMMLVNL True PC9_epitope_Rep3 1113.62900940589 1113.62790993586 67.051 2 -0.2618134275510501 0.064518487379599 0.9438714419765777 ['OR5D16|p.L287Vfs*11|1|0.12|ENSG00000205029|chr11:55839602-55839603|-/C|frameshift_variant', 'ENSG00000205029|ENST00000378396|OR5D16'] 85261 15529 QKQACEIQK True PC9_epitope_Rep1 1074.54917886206 1074.5480899358602 64.556 2 -0.26182485591747484 0.064518487379599 0.9438714419765777 ['nc|ENSG00000182712|P56277|CMC4'] 95425 23765 SALALSLLLV True PC9_epitope_Rep3 998.6375828603 998.63648993586 96.696 2 -0.261930835754885 0.0645515023027999 0.9438714419765777 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000563753.1_1_15:73884305-73925556:-|nuORF', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF', 'nc|ENSG00000156642|Q9Y639-4|NPTN'] 81127 5655 PPHPPPPPP True PC9_epitope_Rep5 931.49158733295 931.49048993586 26.751 2 -0.2619565424721869 0.0645515023027999 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 106899 19903 SYIPLFPQL True NCI_RA007_Epitope_Rep5 1076.5906326678798 1076.5895299358601 83.471 2 -0.2619863768301261 0.0645515023027999 0.9438714419765777 ['ENSG00000165996|ENST00000361271|HACD1'] 103267 12991 SQTFEHPLV True PC9_epitope_Rep5 1056.52400966004 1056.52290993586 54.979 2 -0.2620842404743874 0.06456623841809975 0.9438714419765777 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF'] 81247 4325 PPPHPPPPP True H1975_Epitope_Rep2 931.4915873329498 931.49048993586 21.751 2 -0.26212777101220874 0.06456623841809975 0.9438714419765777 ['nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF'] 27597 8803 FPSAAATAA True PC9_epitope_Rep6 805.39701824177 805.39592993586 43.764 2 -0.2621281280282153 0.06456623841809975 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 49118 6440 KGEFETGFEK True NCI_RA007_Epitope_Rep1 1170.5557037111396 1170.55460993586 29.071 2 -0.26224171270352487 0.06458333333333334 0.9438714419765777 ['nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'nc|ENSG00000103342|P15170|GSPT1', 'ENSG00000189369|ENST00000340438|GSPT2'] 68389 12287 LTSSSPIPR True PC9_epitope_Rep3 956.52909504048 956.52798993586 52.29 2 -0.2623229414664098 0.06465525118327516 0.9438714419765777 ['nc|ENSG00000165806|P55210-2|CASP7'] 81305 5970 PPQTQTPQP True H1975_Epitope_Rep2 992.4927095317598 992.49160993586 27.943 2 -0.2623574921025639 0.0646711620342452 0.9438714419765777 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 81306 5970 PPQTQTPQP True H1975_Epitope_Rep2 992.4927095317598 992.49160993586 27.943 2 -0.2623574921025639 0.0646711620342452 0.9438714419765777 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 9059 20677 AVITGFFTV True PC9_epitope_Rep6 953.5222187548899 953.52112993586 92.294 2 -0.26237140656748226 0.06468825378261824 0.9438714419765777 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 19641 24181 ELRRRFERLRL True PC9_epitope_Rep4 1542.9219118220196 1542.92080993586 101.49 2 -0.26239296804351553 0.06470534490634994 0.9438714419765777 ['nc|ENSG00000174740|Q96DU9-2|PABPC5', 'ENSG00000174740|ENST00000312600|PABPC5'] 35349 11787 GTADALGL True H1975_Epitope_Rep3 716.37046914076 716.36992496793 50.485 1 -0.2624406089652096 0.06471534020317182 0.9438714419765777 ['ENSG00000100151|ENST00000356976|PICK1', 'PICK1|p.A306Pfs*108|1|0.36|ENSG00000100151|chr22:38074382-38074383|GC/-|frameshift_variant', 'nc|ENSG00000100151|Q9NRD5-2|PICK1', 'ENST00000484021.5_1_22:38453431-38470088:+|nuORF'] 30737 6516 GANPVEIR True PC9_epitope_Rep1 854.46101548066 854.45990993586 29.867 2 -0.26245727293554866 0.06471534020317182 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000503199.1_1_5:21882861-21883359:+|nuORF', 'ENST00000476746.5_1_2:198360008-198364584:-|nuORF', 'ENST00000429127.2_1_12:8167969-8168583:+|nuORF', 'nc|ENSG00000144381|P10809-2|HSPD1', 'ENST00000461097.1_1_2:198361816-198363572:-|nuORF', 'ENST00000388967.3_1_3:36809324-36810203:-|nuORF'] 51964 9018 KKWTSVIRL True NCI_RA007_Epitope_Rep2 1129.69716342509 1129.69552490379 39.678 3 -0.2624793356633503 0.06471534020317182 0.9438714419765777 ['ENSG00000007168|ENST00000397195|PAFAH1B1', 'ENST00000609078.1_1_17:2569342-2573633:+|nuORF'] 80974 9293 PNIICDCCKK True H1975_Epitope_Rep1 1135.51880733391 1135.51770993586 40.654 2 -0.26253810488727525 0.06471534020317182 0.9438714419765777 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'nc|ENSG00000197530|Q96AX9-5|MIB2', 'nc|ENSG00000197530|Q96AX9-9|MIB2', 'ENST00000511502.5_1_1:1550926-1563560:+|nuORF', 'ENST00000507229.5_1_1:1551767-1563881:+|nuORF', 'ENST00000508455.1_1_1:1558985-1559326:+|nuORF'] 11237 3954 DEPEKERLRQR True NCI_RA007_Epitope_Rep2 1454.7589883875 1454.75734490379 20.017 3 -0.262549069958535 0.06471534020317182 0.9438714419765777 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF', 'nc|ENSG00000123243|Q86UX2-3|ITIH5', 'nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 90243 8860 RHPGVLSL True PC9_epitope_Rep2 877.51338540669 877.5122899358599 39.431 2 -0.2625642475473292 0.06471534020317182 0.9438714419765777 ['ENST00000468965.2_1_3:47462484-47464052:-|nuORF'] 79065 20477 PFSLSPSLS True PC9_epitope_Rep4 933.48074786573 933.47964993586 86.911 2 -0.26257153423416657 0.06471534020317182 0.9438714419765777 ['ENST00000357375.4_1_19:51914355-51919928:-|nuORF'] 114269 15225 TSAESFVNV True PC9_epitope_Rep6 952.45017601344 952.44906993586 70.661 2 -0.2626308083388321 0.06473242833391189 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 7710 7569 ASQRAEIAA True PC9_epitope_Rep5 915.4773938207898 915.47628993586 34.063 2 -0.2626905849539535 0.06476423625701079 0.9438714419765777 ['SVA_E_dup408|chr10:31969059-31970051:+|2.2329970574096665|0.275459818795955|3.02|498.0|19|3|sense'] 125769 25090 VNIRRRIKLTF True H1975_Epitope_Rep3 1414.8884864354197 1414.88738993586 104.37 2 -0.2627605445776395 0.06476423625701079 0.9438714419765777 ['nc|ENSG00000115762|Q96CS7-2|PLEKHB2'] 21984 7999 ESLTDTQL True NCI_RA007_Epitope_Rep4 905.43419159613 905.43364496793 37.536 1 -0.26276267471728376 0.06476423625701079 0.9438714419765777 ['ENSG00000113615|ENST00000398844|SEC24A'] 45001 14345 IQLDKVNLQV True PC9_epitope_Rep5 1168.6815729306002 1168.6804699358602 60.178 2 -0.2627876120490063 0.06476423625701079 0.9438714419765777 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 62100 8239 LLNLSWQRM True NCI_RA007_Epitope_Rep1 1159.6171988522299 1159.61610993586 36.047 2 -0.2628997079325805 0.06478132193357448 0.9438714419765777 ['ENST00000480169.1_1_1:40205875-40207612:+|nuORF'] 87956 12615 QVQTTLVAL True PC9_epitope_Rep4 971.5651461960299 971.56404993586 56.362 2 -0.26295685187897777 0.06481667549644678 0.9438714419765777 ['ENSG00000117519|ENST00000370206|CNN3', 'nc|ENSG00000117519|Q15417-2|CNN3'] 78033 6354 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 29.25 2 -0.26300985594676735 0.06485202776762879 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 68610 13594 LTYTDVPYIP True H1975_Epitope_Rep2 1180.6015912743999 1180.6004899358602 57.425 2 -0.26307715531140397 0.06486911090407556 0.9438714419765777 ['nc|ENSG00000165694|Q6ZUT3-2|FRMD7', 'ENSG00000165694|ENST00000298542|FRMD7'] 24621 5587 FAQHGTFE True NCI_RA007_Epitope_Rep4 935.4137309350699 935.41262993586 28.091 2 -0.26324497899505833 0.06493980965602908 0.9438714419765777 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 11135 5348 DEEQIQEQVK True NCI_RA007_Epitope_Rep2 1244.5884603913998 1244.5873699358601 25.421 2 -0.26325432821203004 0.06493980965602908 0.9438714419765777 ['ENSG00000132003|ENST00000590508|ZSWIM4', 'nc|ENSG00000132003|Q9H7M6|ZSWIM4'] 44226 17559 ILSQSAVQVL True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 72.549 2 -0.2632937344293975 0.06495570371723446 0.9438714419765777 ['nc|ENSG00000172139|Q4G0N8-2|SLC9C1', 'ENSG00000172139|ENST00000305815|SLC9C1', 'SLC9C1|p.S1038Yfs*4|1|0.36|ENSG00000172139|chr3:112169001-112169002|CT/-|frameshift_variant', 'SLC9C1|p.S672Hfs*9|1|0.11|ENSG00000172139|chr3:112204376-112204376|A/-|frameshift_variant', 'SLC9C1|p.F702Lfs*6|1|0.23|ENSG00000172139|chr3:112204284-112204284|A/-|frameshift_variant'] 102597 10577 SQANVVVKI True PC9_epitope_Rep2 956.5654805492 956.56438993586 46.002 2 -0.26330911583725497 0.06495570371723446 0.9438714419765777 ['ENSG00000100219|ENST00000344347|XBP1'] 80600 20819 PLPEFSAV True PC9_epitope_Rep2 858.4487194614599 858.44762993586 85.524 2 -0.2635398110293153 0.06508119166347015 0.9438714419765777 ['PRAM1|p.G65S|1|0.19|ENSG00000133246|chr19:8499615-8499615|C/T|missense_variant'] 68948 6465 LVFRNGDA True PC9_epitope_Rep4 890.4610154806599 890.45990993586 31.976 2 -0.2635432911358727 0.06508119166347015 0.9438714419765777 ['ENSG00000183066|ENST00000328823|WBP2NL'] 15354 19048 EALFQPSFL True NCI_RA007_Epitope_Rep1 1050.53859709502 1050.53750993586 78.234 2 -0.26360171008286726 0.06509826842989698 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENST00000486001.1_1_1:27651822-27652284:+|nuORF'] 78698 20298 PEEGIVIID True PC9_epitope_Rep4 983.5175272972699 983.5169749679301 86.219 1 -0.26361655638954373 0.0651153445725036 0.9438714419765777 ['nc|ENSG00000163728|Q96N46-2|TTC14'] 98916 17265 SIYDSFDREA True H1975_Epitope_Rep2 1201.52513185885 1201.5240299358602 71.702 2 -0.26364261896644137 0.06513004091174751 0.9438714419765777 ['ENSG00000183150|ENST00000651487|GPR19'] 43339 6023 IHIEQLDKISE True NCI_RA007_Epitope_Rep3 1323.70343057399 1323.70177490379 30.67 3 -0.26366074844135734 0.06513004091174751 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 112717 13042 TPHPFPAV True PC9_epitope_Rep3 864.4493881678 864.44828993586 55.192 2 -0.26367955998760173 0.06513004091174751 0.9438714419765777 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 33372 6628 GLERAASLAV True PC9_epitope_Rep6 985.5556441414898 985.55454993586 34.212 2 -0.2637846223013503 0.0651629988128938 0.9438714419765777 ['ENST00000433688.2_2_11:63533575-63533752:-|nuORF'] 8135 9000 ATEVDSRWQEY True H1975_Epitope_Rep1 1382.6102584651399 1382.60916993586 39.525 2 -0.2637884309281653 0.0651629988128938 0.9438714419765777 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000485063.1_1_1:39748843-39749872:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 2917 7217 AFEASEAPD True NCI_RA007_Epitope_Rep1 935.3872414037099 935.38614993586 32.062 2 -0.26387962210598315 0.0651629988128938 0.9438714419765777 ['MYOM3|p.P922S|1|0.23|ENSG00000142661|chr1:24075413-24075413|G/A|missense_variant'] 110477 19644 TIPNNLIGC True PC9_epitope_Rep3 943.47970231991 943.47860993586 80.798 2 -0.26390387984930275 0.06517769093100552 0.9438714419765777 ['ENSG00000169564|ENST00000303577|PCBP1'] 54902 19376 LAGPAELL True PC9_epitope_Rep4 782.4538048418999 782.4532549679301 82.639 1 -0.2639044401587476 0.06517769093100552 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 86093 13892 QPQLPYSQA True PC9_epitope_Rep3 1030.5083595959 1030.5072699358602 58.515 2 -0.2639407781409572 0.06517769093100552 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 72022 17204 MQLEDLKQQL True PC9_epitope_Rep4 1244.64347316972 1244.6423699358602 74.181 2 -0.264019098758111 0.06524835646457268 0.9438714419765777 ['ENSG00000269335|ENST00000594239|IKBKG', 'nc|ENSG00000269335|Q9Y6K9-2|IKBKG'] 81327 5687 PPRPPPPPP True PC9_epitope_Rep1 950.5337864980999 950.53268993586 26.697 2 -0.26402128028581906 0.06524835646457268 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 136043 4445 YFSCLRRSRP True PC9_epitope_Rep6 1283.6557096192698 1283.65405490379 24.254 3 -0.26412339601362256 0.06526542612443162 0.9438714419765777 ['ENST00000529983.2_1_12:89918135-89918465:-|nuORF'] 9114 20656 AVLIDFSPLT True PC9_epitope_Rep1 1074.5961119711399 1074.5950099358602 84.275 2 -0.2641972388230529 0.06528249516087799 0.9438714419765777 ['ENST00000429172.5_2_2:171627798-171634191:+|nuORF'] 87552 9400 QTLEELEELGK True H1975_Epitope_Rep1 1287.6558116752296 1287.6547099358602 41.07 2 -0.2642662363540407 0.06533489153458476 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A', 'ENSG00000253797|ENST00000521776|UTP14C'] 82079 14311 PSYFLLLLCR True H1975_Epitope_Rep1 1223.6736510991898 1223.6725499358602 60.234 2 -0.2642766710973182 0.06533489153458476 0.9438714419765777 ['chr7:135169060-135177208|304|21.35|0.17|6.94|-|2|TE_info:HERV3-int,HERV3-int_dup109,ERV1,LTR,donor,+,135177208,135180551|CYREN,None|29'] 126160 20765 VPFPTPLEA True PC9_epitope_Rep2 969.5171333744498 969.51602993586 85.315 2 -0.2644770704524906 0.0654031551270815 0.9438714419765777 ['ENSG00000196976|ENST00000357360|LAGE3'] 79944 18541 PIRLEFEKV True PC9_epitope_Rep3 1129.64954452633 1129.64788490379 76.538 3 -0.2644836319920314 0.0654031551270815 0.9438714419765777 ['ENSG00000062822|ENST00000440232|POLD1'] 126093 4644 VPDRFTGSG True NCI_RA007_Epitope_Rep3 934.4508447197799 934.44974993586 25.19 2 -0.2644898808410781 0.0654031551270815 0.9438714419765777 ['CON__Q05B55'] 54760 11582 LAEQNHLYEDL True NCI_RA007_Epitope_Rep4 1343.63574493699 1343.6346499358601 51.497 2 -0.2645073480624991 0.0654031551270815 0.9438714419765777 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'TONSL|p.R443Afs*6|1|0.12|ENSG00000160949|chr8:144440168-144440175|GCAGCCTC/-|frameshift_variant'] 32059 6626 GEVTAVEEA True H1975_Epitope_Rep3 903.41854153199 903.4179949679301 30.439 1 -0.2645353039840022 0.06542021946721685 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 27367 21657 FMPPGLQEL True PC9_epitope_Rep5 1030.5157534754599 1030.5151749679299 88.35 1 -0.26467738777766925 0.06547379952528756 0.9438714419765777 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779820-109780507:+|nuORF'] 134145 7744 WRFRPNTR True PC9_epitope_Rep3 1131.6049943757498 1131.60334490379 34.78 3 -0.2647399085263699 0.06549086195249311 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 124184 17255 VLADVIDN True PC9_epitope_Rep1 857.44944773745 857.44834993586 71.189 2 -0.264811892541423 0.06552618126049807 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 10004 13564 AYTISATELL True PC9_epitope_Rep2 1080.5702911461199 1080.56918993586 57.465 2 -0.26487136497703406 0.06554204549603827 0.9438714419765777 ['ENSG00000185985|ENST00000335565|SLITRK2'] 43078 6264 IGISHGSVVA True PC9_epitope_Rep4 938.5185303567799 938.51742993586 31.148 2 -0.2648726368433908 0.06554204549603827 0.9438714419765777 ['ENSG00000155897|ENST00000286355|ADCY8'] 140533 20523 YYLGNPAEF True PC9_epitope_Rep2 1072.48656152216 1072.48597496793 84.373 1 -0.26490791408857534 0.0655555149877688 0.9438714419765777 ['ENSG00000049449|ENST00000054950|RCN1', 'nc|ENSG00000049449|Q15293-2|RCN1'] 105128 11242 STLPKSLSL True PC9_epitope_Rep5 944.55424715916 944.55314993586 48.232 2 -0.26490998381612635 0.0655555149877688 0.9438714419765777 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 33380 14694 GLESTYLF True PC9_epitope_Rep1 928.45419876472 928.45310993586 61.342 2 -0.2649226439035423 0.0655555149877688 0.9438714419765777 ['ENST00000373109.6_1_10:73820245-73820362:-|nuORF'] 112837 17938 TPMPPISSV True PC9_epitope_Rep1 927.47355431031 927.47244993586 73.791 2 -0.2649487600588326 0.0655555149877688 0.9438714419765777 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 9350 22989 AVTGILVQL True PC9_epitope_Rep2 912.5644179200399 912.56332993586 93.921 2 -0.2650322368333349 0.06557017944177726 0.9438714419765777 ['ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'ENST00000487805.6_1_3:49750857-49758735:+|nuORF'] 30756 7834 GAPATTRLSTR True PC9_epitope_Rep3 1129.62036965637 1129.61872490379 35.123 3 -0.26503252245244246 0.06557017944177726 0.9438714419765777 ['ENST00000500074.2_1_3:129824416-129830240:-|nuORF'] 104174 13552 SSCSLHLQVV True PC9_epitope_Rep3 1071.53827982519 1071.5371899358602 57.183 2 -0.2650413129485692 0.06557017944177726 0.9438714419765777 ['ENST00000412260.5_1_17:18420776-18423033:-|nuORF'] 16062 6250 EEASFYYGT True PC9_epitope_Rep5 1065.42910621569 1065.42800993586 29.019 2 -0.26513992384594254 0.06564199919681647 0.9438714419765777 ['ENSG00000188501|ENST00000695545|LCTL'] 16435 12309 EELLQLKAIHQ True H1975_Epitope_Rep1 1320.74015043588 1320.73904993586 52.373 2 -0.2651848958267287 0.06565785630841121 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 127746 24789 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 107.77 2 -0.2651906636085505 0.06565785630841121 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 140665 15014 YYPSTPGRYSI True PC9_epitope_Rep1 1302.6244519773 1302.6228149037902 62.571 3 -0.26528961330612744 0.06569196510057314 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 76816 21837 NVELILDIA True PC9_epitope_Rep2 998.5648118428599 998.56370993586 89.471 2 -0.265289895746177 0.06569196510057314 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 82117 20071 PTCPWRASWNV True PC9_epitope_Rep1 1315.6131761009499 1315.61152490379 82.03 3 -0.26529887382193656 0.06570901856279775 0.9438714419765777 ['ENST00000536163.5_2_7:141385350-141386413:-|nuORF'] 5693 12268 APAPPVYEA True PC9_epitope_Rep5 913.4545331178899 913.45342993586 52.177 2 -0.2653602088120649 0.06574312361970469 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'SIN3A|p.P268Hfs*19|1|0.34|ENSG00000169375|chr15:75411697-75411697|G/-|frameshift_variant', 'ENST00000568919.1_1_15:75722503-75722716:-|nuORF'] 10564 17594 CQSMNILTSV True PC9_epitope_Rep5 1094.51001647202 1094.5089099358602 72.683 2 -0.2653970868939949 0.06574312361970469 0.9438714419765777 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 73388 9415 NERKAEVV True PC9_epitope_Rep5 943.5086939490698 943.50758993586 41.17 2 -0.265432630476543 0.0657601752144552 0.9438714419765777 ['nc|ENSG00000110104|Q9H6F5-2|CCDC86', 'ENSG00000110104|ENST00000227520|CCDC86'] 131512 17150 VVVEIIKAV True PC9_epitope_Rep4 968.6270181765998 968.62592993586 73.974 2 -0.2655159394084624 0.06581132626430383 0.9438714419765777 ['ENSG00000066654|ENST00000396083|THUMPD1'] 31147 13749 GDDIALLK True H1975_Epitope_Rep3 843.47018318203 843.46908993586 58.184 2 -0.26552664960721933 0.06581132626430383 0.9438714419765777 ['ENSG00000166278|ENST00000299367|C2', 'nc|ENSG00000166278|P06681-2|C2', 'nc|ENSG00000166278|P06681-3|C2', 'ENST00000486124.5_1_6:31905151-31913001:+|nuORF'] 65805 15270 LSKARRRSRPR True PC9_epitope_Rep4 1381.8490812349298 1381.8474449037901 66.666 3 -0.2655563212679305 0.06581132626430383 0.9438714419765777 ['ENST00000395094.3_1_16:30543822-30545758:-|nuORF', 'ENST00000252799.3_1_16:30543822-30545758:-|nuORF', 'nc|ENSG00000169955|Q9BV97|ZNF747', 'ENSG00000169955|ENST00000693075|ZNF747'] 20580 7559 EQEFTQLC True NCI_RA007_Epitope_Rep4 996.4222470134398 996.4216949679301 35.723 1 -0.2656975419903435 0.06584662554294266 0.9438714419765777 ['ENSG00000099910|ENST00000328879|KLHL22', 'ENST00000494929.5_1_22:20819888-20843498:-|nuORF', 'ENST00000470335.1_1_22:20837987-20843498:-|nuORF'] 105021 4989 STIKEVAQA True PC9_epitope_Rep2 945.5131106231698 945.51200993586 24.56 2 -0.26575074718153774 0.06586126977754257 0.9438714419765777 ['ENSG00000090054|ENST00000262554|SPTLC1', 'ENST00000469778.1_1_9:94794749-94800706:-|nuORF'] 111567 22470 TLMTFSIIEL True PC9_epitope_Rep5 1166.62569784726 1166.62460993586 91.433 2 -0.26579673715275326 0.06586126977754257 0.9438714419765777 ['ENSG00000166930|ENST00000300190|MS4A5'] 80928 19201 PMLPASLCQD True NCI_RA007_Epitope_Rep3 1073.48855275145 1073.48744993586 83.828 2 -0.2658046390965001 0.06586126977754257 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 99932 9702 SLIEVDTSER True PC9_epitope_Rep1 1147.57208205127 1147.57098993586 42.176 2 -0.26582535905584775 0.06591240875912409 0.9438714419765777 ['MAGEE2|p.H376R|1|0.44|ENSG00000186675|chrX:75783925-75783925|T/C|missense_variant'] 25657 19026 FEYLSYCL True PC9_epitope_Rep1 1036.4575698929998 1036.45646993586 77.974 2 -0.2658391980991986 0.06591240875912409 0.9438714419765777 ['ENSG00000100151|ENST00000356976|PICK1', 'PICK1|p.A306Pfs*108|1|0.36|ENSG00000100151|chr22:38074382-38074383|GC/-|frameshift_variant', 'nc|ENSG00000100151|Q9NRD5-2|PICK1', 'ENST00000484021.5_1_22:38453431-38470088:+|nuORF'] 103992 17922 SRRRPRPRWRL True NCI_RA007_Epitope_Rep5 1534.9181638542598 1534.9170699358601 75.728 2 -0.2658678683152807 0.06591240875912409 0.9438714419765777 ['nc|ENSG00000120913|Q96JY6-2|PDLIM2'] 41517 5791 IDANKTDP True H1975_Epitope_Rep3 872.4239612656 872.42286993586 27.299 2 -0.2659084122520811 0.06592825079376666 0.9438714419765777 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 128716 15317 VSPGLTPSL True PC9_epitope_Rep6 869.48583324617 869.48472993586 71.038 2 -0.26591406429427294 0.06592825079376666 0.9438714419765777 ['ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 71325 12338 MHFVRSDEL True PC9_epitope_Rep1 1132.5335287979199 1132.53187490379 52.315 3 -0.2659598008661868 0.06594048205521193 0.9438714419765777 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153760401-153761015:-|nuORF'] 77825 13405 PAFLSGPGAAE True NCI_RA007_Epitope_Rep3 1015.4974605590297 1015.49636993586 60.008 2 -0.2659804857549001 0.06594048205521193 0.9438714419765777 ['ENSG00000132478|ENST00000589666|UNK'] 8411 4924 ATQNSELIK True NCI_RA007_Epitope_Rep5 1002.5345743437399 1002.53346993586 25.64 2 -0.2660959029009 0.06594048205521193 0.9438714419765777 ['ENSG00000198939|ENST00000361362|ZFP2'] 96368 11191 SEGLAQLTS True PC9_epitope_Rep1 904.45017601344 904.44962496793 47.928 1 -0.2661279363391301 0.06594048205521193 0.9438714419765777 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 135003 10444 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.3808149679301 45.493 1 -0.2661722061603688 0.06594048205521193 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 129008 16515 VSYQSVLS True PC9_epitope_Rep2 881.4494477374499 881.44834993586 68.766 2 -0.26622640406357556 0.06595391436025615 0.9438714419765777 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF', 'ENST00000590884.5_1_18:43437816-43458370:-|nuORF'] 48301 13149 KDLWPEQDIK True PC9_epitope_Rep4 1270.65575210558 1270.65409490379 58.474 3 -0.2662508123810715 0.06595391436025615 0.9438714419765777 ['ENST00000600692.5_1_19:21350445-21366834:+|nuORF', 'ENSG00000196705|ENST00000311048|ZNF431'] 59280 17764 LGGVAVSLS True PC9_epitope_Rep2 801.4596184983301 801.4590749679301 73.617 1 -0.26626265581122954 0.06595391436025615 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000167077|Q5TIA1-7|MEI1', 'nc|ENSG00000167077|Q5TIA1-5|MEI1', 'nc|ENSG00000167077|Q5TIA1-3|MEI1', 'nc|ENSG00000167077|Q5TIA1-2|MEI1', 'ENSG00000167077|ENST00000401548|MEI1'] 132505 7086 VYPERSTSY True PC9_epitope_Rep3 1100.51383889916 1100.51274993586 32.265 2 -0.26626299575145823 0.06595391436025615 0.9438714419765777 ['ENSG00000111786|ENST00000229390|SRSF9', 'ENST00000548326.1_1_12:120899824-120899986:-|nuORF', 'ENST00000548792.1_1_12:120899824-120901956:-|nuORF', 'ENST00000603963.1_1_12:120899824-120902572:-|nuORF'] 99835 5143 SLGYFSPAP True H1975_Epitope_Rep2 937.4545331178898 937.45342993586 24.859 2 -0.2663566177246937 0.06597095526527037 0.9438714419765777 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'ZFC3H1|p.I881Ffs*9|2|0.18|ENSG00000133858|chr12:71633308-71633308|T/-|frameshift_variant'] 111774 21143 TLQQLIMMSL True PC9_epitope_Rep1 1176.62465230144 1176.6235499358602 86.158 2 -0.26641823364660766 0.0659831804002408 0.9438714419765777 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 115144 2621 TVADKIHSV True PC9_epitope_Rep2 968.52909504048 968.52798993586 14.737 2 -0.266436081021146 0.0659831804002408 0.9438714419765777 ['ENSG00000276023|ENST00000617516|DUSP14'] 34225 7479 GPKEPGFEA True PC9_epitope_Rep5 930.4446967101799 930.44358993586 33.72 2 -0.2664628435471812 0.0659831804002408 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 99949 17990 SLIGTDSQAF True PC9_epitope_Rep5 1037.5029398622898 1037.50184993586 74.215 2 -0.2664824877836807 0.0659831804002408 0.9438714419765777 ['nc|ENSG00000095637|Q9BX66-12|SORBS1', 'nc|ENSG00000095637|Q9BX66-9|SORBS1', 'ENSG00000095637|ENST00000371247|SORBS1', 'nc|ENSG00000095637|Q9BX66-11|SORBS1', 'nc|ENSG00000095637|Q9BX66-2|SORBS1', 'nc|ENSG00000095637|Q9BX66-5|SORBS1', 'nc|ENSG00000095637|Q9BX66-3|SORBS1', 'nc|ENSG00000095637|Q9BX66-6|SORBS1', 'nc|ENSG00000095637|Q9BX66-10|SORBS1', 'nc|ENSG00000095637|Q9BX66-8|SORBS1', 'nc|ENSG00000095637|Q9BX66-4|SORBS1', 'nc|ENSG00000095637|Q9BX66-7|SORBS1', 'ENST00000474353.6_1_10:97106208-97250794:-|nuORF'] 31661 5903 GEIAIDDIR True NCI_RA007_Epitope_Rep4 1000.5189242796 1000.51782993586 29.329 2 -0.2665096897887242 0.0659831804002408 0.9438714419765777 ['ENST00000472299.5_1_2:206628534-206631586:+|nuORF', 'ENST00000485684.5_1_2:206628477-206631981:+|nuORF', 'ENST00000467850.1_1_2:206629136-206659779:+|nuORF', 'nc|ENSG00000118257|O60462-4|NRP2', 'nc|ENSG00000118257|O60462-5|NRP2', 'nc|ENSG00000118257|O60462-2|NRP2', 'ENSG00000118257|ENST00000357785|NRP2', 'nc|ENSG00000118257|O60462|NRP2'] 102180 8017 SPSATVVSA True PC9_epitope_Rep3 817.41814760917 817.41704993586 35.814 2 -0.2665201714601913 0.06599660713959979 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 84036 7892 QEPKNSEPHDP True H1975_Epitope_Rep2 1276.5683936531598 1276.5672899358601 35.303 2 -0.26652085588999574 0.06599660713959979 0.9438714419765777 ['RTL3|p.Q159H|1|0.66|ENSG00000179300|chrX:78657944-78657944|C/A|missense_variant'] 23741 19915 EYIQFVPLL True NCI_RA007_Epitope_Rep3 1120.6168474157198 1120.61574993586 86.799 2 -0.26653205177545997 0.06599660713959979 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 58417 4236 LEVSVDSDQKK True NCI_RA007_Epitope_Rep2 1246.6404959642598 1246.63885490379 21.116 3 -0.2665399364592825 0.06599660713959979 0.9438714419765777 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 117266 13140 VAAAALGEAA True PC9_epitope_Rep5 842.4497820906199 842.44923496793 55.547 1 -0.2665646949952433 0.06603188500966765 0.9438714419765777 ['ENST00000334371.3_1_1:152749031-152749076:+|nuORF'] 123278 7035 VHRSPRPP True H1975_Epitope_Rep3 944.5304324531598 944.52932993586 32.025 2 -0.26671433661588756 0.06608540211225215 0.9438714419765777 ['ENST00000425690.7_1_19:45165089-45165437:+|nuORF'] 24403 20807 FAFPGSTNSL True PC9_epitope_Rep5 1039.49746055903 1039.49636993586 85.083 2 -0.26672986226115303 0.0660976143576275 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 55459 8460 LATVTVRP True PC9_epitope_Rep6 855.5178020807899 855.51670993586 42.245 2 -0.2667300399756469 0.0660976143576275 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 33611 16449 GLLQELSSI True PC9_epitope_Rep4 958.53351171458 958.53240993586 71.239 2 -0.2667389922910199 0.0660976143576275 0.9438714419765777 ['HTR3A|p.V448Cfs*12|1|0.42|ENSG00000166736|chr11:113989666-113989666|C/-|frameshift_variant', 'nc|ENSG00000166736|P46098-3|HTR3A', 'ENSG00000166736|ENST00000504030|HTR3A', 'nc|ENSG00000166736|P46098-4|HTR3A', 'nc|ENSG00000166736|P46098-2|HTR3A', 'nc|ENSG00000166736|P46098-5|HTR3A'] 92817 5942 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 27.914 2 -0.2667400564596388 0.0660976143576275 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 139698 15231 YTTWKLTL True PC9_epitope_Rep6 1024.5593325395998 1024.55822993586 70.685 2 -0.26674655182884777 0.0660976143576275 0.9438714419765777 ['ENSG00000163885|ENST00000352312|CFAP100', 'nc|ENSG00000163885|Q494V2-2|CFAP100'] 18602 5984 ELAGANRQ True NCI_RA007_Epitope_Rep2 857.4355290088099 857.43442993586 27.887 2 -0.26677231855007677 0.06611464735814988 0.9438714419765777 ['nc|nan|Q8WYQ4-2|C22orf15'] 16581 7118 EEREKQLAA True NCI_RA007_Epitope_Rep4 1072.5512870370396 1072.55018993586 33.999 2 -0.2668146557849697 0.06612806156876333 0.9438714419765777 ['nc|ENSG00000135525|Q14244-2|MAP7', 'nc|ENSG00000135525|Q14244-6|MAP7', 'nc|ENSG00000135525|Q14244-4|MAP7', 'ENSG00000135525|ENST00000354570|MAP7', 'nc|ENSG00000135525|Q14244-7|MAP7'] 98645 19113 SIPGPGYCMGI True PC9_epitope_Rep2 1093.49363813189 1093.49254993586 78.888 2 -0.26681483147520857 0.06612806156876333 0.9438714419765777 ['ENSG00000137869|ENST00000396402|CYP19A1', 'CYP19A1|p.T462Ifs*7|1|0.33|ENSG00000137869|chr15:51210934-51210935|TG/-|frameshift_variant', 'nc|ENSG00000137869|P11511-2|CYP19A1'] 103360 8799 SQVLSKWDP True H1975_Epitope_Rep1 1058.53965972418 1058.53856993586 38.771 2 -0.26681519061503334 0.06612806156876333 0.9438714419765777 ['ENSG00000253797|ENST00000521776|UTP14C'] 100362 6566 SLNHEWTFEKL True NCI_RA007_Epitope_Rep1 1402.6881148630198 1402.68646490379 29.554 3 -0.2668219755690847 0.06612806156876333 0.9438714419765777 ['ENSG00000171492|ENST00000337338|LRRC8D'] 44918 4634 IQEAGTEVVK True H1975_Epitope_Rep3 1072.5764391557198 1072.57534993586 22.946 2 -0.26687088418919025 0.06614147382241917 0.9438714419765777 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 114264 16221 TSAESFVNV True PC9_epitope_Rep4 952.45017601344 952.44906993586 70.337 2 -0.2668864672630143 0.06614147382241917 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 118683 8124 VEASDQIRK True NCI_RA007_Epitope_Rep1 1044.55637241748 1044.55526993586 35.598 2 -0.2669050150767412 0.06614147382241917 0.9438714419765777 ['ENSG00000242550|ENST00000238508|SERPINB10'] 96349 12234 SEFQIPTA True NCI_RA007_Epitope_Rep3 891.4337976733099 891.43270993586 55.267 2 -0.2669123714223161 0.06614147382241917 0.9438714419765777 ['nc|ENSG00000132185|Q7L513-4|FCRLA', 'nc|ENSG00000132185|Q7L513-11|FCRLA', 'nc|ENSG00000132185|Q7L513-5|FCRLA', 'nc|ENSG00000132185|Q7L513-14|FCRLA', 'nc|ENSG00000132185|Q7L513-3|FCRLA', 'nc|ENSG00000132185|Q7L513-12|FCRLA', 'ENSG00000132185|ENST00000236938|FCRLA', 'nc|ENSG00000132185|Q7L513-2|FCRLA', 'nc|ENSG00000132185|Q7L513-9|FCRLA', 'nc|ENSG00000132185|Q7L513-10|FCRLA', 'ENST00000470841.1_1_1:161681590-161683167:+|nuORF'] 132468 23776 VYPALTFIL True PC9_epitope_Rep3 1035.60046907559 1035.59936993586 96.737 2 -0.2669436640815419 0.0661743253099927 0.9438714419765777 ['SLC44A5|p.H538Tfs*18|1|0.16|ENSG00000137968|chr1:75217878-75217878|G/-|frameshift_variant', 'nc|ENSG00000137968|Q8NCS7-5|SLC44A5', 'ENSG00000137968|ENST00000370859|SLC44A5', 'nc|ENSG00000137968|Q8NCS7|SLC44A5'] 92814 5662 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 26.853 2 -0.26696211035068024 0.0661743253099927 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 75234 6989 NPKEFYHEV True PC9_epitope_Rep2 1161.54547338061 1161.54382490379 32.282 3 -0.26697465311357893 0.0661743253099927 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 92813 5565 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 26.484 2 -0.2670393373872441 0.06619135318466111 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 134862 14948 YAAEVRYTFF True PC9_epitope_Rep5 1265.6080736371698 1265.60641490379 62.499 3 -0.26713102410364387 0.06624243308292611 0.9438714419765777 ['ENST00000518231.1_1_8:86376310-86386082:+|nuORF'] 61597 14430 LLGPTVM[Oxidation]L True H1975_Epitope_Rep2 858.4884764789 858.4879249679301 60.658 1 -0.26715550273532335 0.06624243308292611 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF', 'ENST00000536689.5_1_19:10664629-10668377:-|nuORF'] 61598 16382 LLGPTVML True H1975_Epitope_Rep2 842.4935614789 842.4930149679301 68.234 1 -0.2671694688614829 0.06624243308292611 0.9438714419765777 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF', 'ENST00000536689.5_1_19:10664629-10668377:-|nuORF'] 125619 15314 VMEKPSPLLVG True PC9_epitope_Rep1 1168.6525813014398 1168.6514899358601 63.726 2 -0.2671885663489281 0.06625945847388094 0.9438714419765777 ['nc|ENSG00000138757|Q9UN86-2|G3BP2', 'ENSG00000138757|ENST00000359707|G3BP2', 'G3BP1|p.Y20Ffs*5|2|0.17|ENSG00000145907|chr5:151786676-151786677|-/TT|frameshift_variant', 'ENST00000507701.1_1_4:76587113-76598433:-|nuORF', 'ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000518726.5_1_5:151166169-151166277:+|nuORF'] 45553 14326 ISGHGELVLS True PC9_epitope_Rep6 1010.53965972418 1010.53856993586 67.003 2 -0.2672186447123855 0.0662947161142107 0.9438714419765777 ['MAP1A|p.R521G|1|0.28|ENSG00000166963|chr15:43523034-43523034|A/G|missense_variant'] 115057 3806 TTRRCQCRLGP True NCI_RA007_Epitope_Rep4 1289.6444933125697 1289.6428349037901 20.821 3 -0.2672463294058001 0.0663093219566446 0.9438714419765777 ['nc|ENSG00000286025|P0DSO1|FAM246C'] 82896 16694 PVYKNLQLF True PC9_epitope_Rep6 1120.6280808057597 1120.6269899358601 76.685 2 -0.2672934297879986 0.0663093219566446 0.9438714419765777 ['nc|ENSG00000184428|Q969P6-2|TOP1MT', 'ENSG00000184428|ENST00000329245|TOP1MT'] 125954 9672 VPAFQPHTG True PC9_epitope_Rep4 952.4766655447999 952.47556993586 44.833 2 -0.2673180463261146 0.0663093219566446 0.9438714419765777 ['ENSG00000160111|ENST00000443236|CPAMD8', 'nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'CPAMD8|p.V1154Sfs*25|1|0.33|ENSG00000160111|chr19:16928060-16928060|C/-|frameshift_variant'] 106843 16149 SYIDLSAWCYY True H1975_Epitope_Rep2 1382.5852895872601 1382.58477496793 67.329 1 -0.2673649147817883 0.06632392620141471 0.9438714419765777 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 92812 5902 RRLKHKRKK True PC9_epitope_Rep1 1248.83672564608 1248.8356299358602 27.518 2 -0.267366410727757 0.06632392620141471 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 15907 5173 EDRFNSIP True H1975_Epitope_Rep2 976.4614094034799 976.46030993586 24.974 2 -0.26740257471287215 0.06632392620141471 0.9438714419765777 ['nc|ENSG00000101190|Q9UL49-1|TCFL5', 'TCFL5|p.D480Tfs*4|1|0.15|ENSG00000101190|chr20:62842040-62842040|C/-|frameshift_variant', 'ENSG00000101190|ENST00000335351|TCFL5'] 4844 23941 ALFGALFLA True PC9_epitope_Rep3 921.5323895157699 921.53128993586 97.376 2 -0.2675458398008665 0.06634094762364866 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 118158 15946 VAVLQEVAA True PC9_epitope_Rep4 898.5123823471798 898.51128993586 69.263 2 -0.2675748404438632 0.06637256867856427 0.9438714419765777 ['nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENSG00000204843|ENST00000628224|DCTN1', 'ENST00000466110.5_1_2:74592577-74593714:-|nuORF'] 81819 14758 PSGFTITSA True PC9_epitope_Rep6 879.43379767331 879.43270993586 68.718 2 -0.26759682950673874 0.06637256867856427 0.9438714419765777 ['ENST00000171757.2_1_X:78216246-78216354:+|nuORF'] 2056 15028 AELESGGGSVP True H1975_Epitope_Rep2 1001.4665543535698 1001.46544993586 62.958 2 -0.2676359496316534 0.06637256867856427 0.9438714419765777 ['ENSG00000277363|ENST00000617146|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-2|SRCIN1'] 66020 15380 LSMKLSICFMK True PC9_epitope_Rep3 1299.67530797531 1299.67366490379 64.315 3 -0.2676962862779534 0.06637256867856427 0.9438714419765777 ['nc|ENSG00000180263|Q6ZV73-2|FGD6', 'ENSG00000180263|ENST00000343958|FGD6'] 34844 8695 GQVGGQVSV True PC9_epitope_Rep2 829.42938099921 829.42883496793 38.808 1 -0.2678408434199307 0.06638837747680416 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 132350 17331 VYLWLSFL True PC9_epitope_Rep6 1039.5742543277497 1039.57314993586 79.277 2 -0.267845199538498 0.06638837747680416 0.9438714419765777 ['ENSG00000234719|ENST00000399147|NPIPB2'] 101323 11968 SLYNHLRRHEL True PC9_epitope_Rep1 1436.7636798451201 1436.76202490379 50.899 3 -0.2679235269328544 0.06643700787401575 0.9438714419765777 ['nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'nc|ENSG00000183963|P53814-2|SMTN'] 79507 12647 PGQLKILTG True PC9_epitope_Rep1 925.55966689277 925.55856993586 53.516 2 -0.2679999026925866 0.06643700787401575 0.9438714419765777 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 54794 10041 LAEYDLDKY True H1975_Epitope_Rep3 1128.5339056373998 1128.53280993586 43.658 2 -0.2680188648223408 0.06643700787401575 0.9438714419765777 ['ENSG00000136045|ENST00000412830|PWP1', 'nc|ENSG00000136045|Q13610-2|PWP1'] 137395 20251 YLLIPLLER True PC9_epitope_Rep6 1128.69068106232 1128.68958993586 90.58 2 -0.26802710905882987 0.06643700787401575 0.9438714419765777 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7'] 36493 6914 GVKFREHQFT True NCI_RA007_Epitope_Rep3 1247.64110510095 1247.63944490379 34.299 3 -0.2680923166175765 0.06643700787401575 0.9438714419765777 ['nc|ENSG00000044524|P29320-2|EPHA3', 'ENSG00000044524|ENST00000336596|EPHA3'] 96311 8001 SEEVGIAEA True H1975_Epitope_Rep2 903.41854153199 903.41744993586 35.725 2 -0.26813635327760793 0.06645402351225736 0.9438714419765777 ['nc|ENSG00000106263|P55884-2|EIF3B', 'ENSG00000106263|ENST00000360876|EIF3B'] 64491 24880 LQVRKRKYFKK True PC9_epitope_Rep2 1492.9354366278396 1492.9343299358602 101.37 2 -0.2681886844940798 0.06650385463558658 0.9438714419765777 ['NFIC|p.A36V|2|0.19|ENSG00000141905|chr19:3381788-3381788|C/T|missense_variant'] 35963 21041 GVATVGLVSS True H1975_Epitope_Rep3 888.4916469026 888.49054993586 87.885 2 -0.2681915286943521 0.06650385463558658 0.9438714419765777 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2'] 90415 21720 RIPDIVLWPT True PC9_epitope_Rep1 1208.6917436914798 1208.6906499358602 88.379 2 -0.2681969195258905 0.06650385463558658 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000460342.1_1_2:178301730-178305781:+|nuORF', 'ENSG00000018510|ENST00000264167|AGPS'] 15534 6347 EASADVMLSP True H1975_Epitope_Rep2 1018.46411182542 1018.46300993586 29.343 2 -0.2682163156675304 0.06650385463558658 0.9438714419765777 ['ENST00000496594.5_1_9:130883426-130884979:-|nuORF'] 488 2633 AAPAAPAAGE True PC9_epitope_Rep2 824.4028318981999 824.40172993586 14.777 2 -0.26827519013720785 0.06652086750501185 0.9438714419765777 ['ENSG00000101115|ENST00000217086|SALL4', 'SALL4|p.D148Mfs*8|1|0.35|ENSG00000101115|chr20:51792041-51792041|C/-|frameshift_variant', 'SALL4|p.Q266Hfs*24|1|0.13|ENSG00000101115|chr20:51791685-51791685|C/-|frameshift_variant', 'SALL4|p.S471*|2|0.12|ENSG00000101115|chr20:51791068-51791071|AAAG/-|frameshift_variant', 'nc|ENSG00000101115|Q9UJQ4-2|SALL4'] 100672 11219 SLQVWRGQGP True H1975_Epitope_Rep1 1126.5883412520998 1126.5872499358602 48.125 2 -0.26842948803485606 0.06659133984545852 0.9438714419765777 ['ENST00000301634.11_1_17:76170195-76170261:-|nuORF'] 78060 2555 PALPPQAH True PC9_epitope_Rep6 829.44463714053 829.44354993586 14.756 2 -0.2684403812595253 0.06659133984545852 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 18014 9740 EIIAKQGG True PC9_epitope_Rep2 814.45486747106 814.45376993586 42.805 2 -0.268509274694173 0.06662657408926066 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 222 17334 AAFTAFEEA True PC9_epitope_Rep6 955.4287122928698 955.42760993586 79.289 2 -0.2686298754233185 0.06669582331073694 0.9438714419765777 ['ENSG00000007080|ENST00000445755|CCDC124'] 93229 10919 RRRRRRRPLWR True NCI_RA007_Epitope_Rep2 1663.0355936483397 1663.0339349037902 47.079 3 -0.2686536435640327 0.06669582331073694 0.9438714419765777 ['EIF2S2-ADRA1D|1|fusion', 'ENSG00000171873|ENST00000379453|ADRA1D'] 15610 5505 EAVFDDDME True H1975_Epitope_Rep3 1069.3910064548097 1069.38990993586 26.227 2 -0.2686553998948404 0.06669582331073694 0.9438714419765777 ['nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1', 'ENST00000472776.1_1_2:122122630-122145458:-|nuORF'] 100986 7973 SLSVHPSNL True PC9_epitope_Rep4 952.4977949122 952.49668993586 38.114 2 -0.2688028292011221 0.06674927565282358 0.9438714419765777 ['ZNF382|p.E461Kfs*84|1|0.35|ENSG00000161298|chr19:36627274-36627274|G/-|frameshift_variant', 'nc|ENSG00000161298|Q96SR6-3|ZNF382', 'nc|ENSG00000161298|Q96SR6-2|ZNF382', 'ENSG00000161298|ENST00000292928|ZNF382'] 45322 5302 ISCTVEGAP True H1975_Epitope_Rep3 875.4058686733099 875.40476993586 25.473 2 -0.26895798132887033 0.06676506496109623 0.9438714419765777 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A', 'ENST00000526234.1_1_19:17530944-17533268:+|nuORF', 'MVB12A|p.K158Sfs*85|2|0.25|ENSG00000141971|chr19:17423553-17423553|C/-|frameshift_variant', 'ENST00000528997.5_1_19:17530944-17531526:+|nuORF', 'ENST00000528732.1_1_19:17530944-17531526:+|nuORF'] 23111 9369 EVLSKWKGDYE True NCI_RA007_Epitope_Rep2 1352.66123140884 1352.6601299358601 41.052 2 -0.2689596611600137 0.06676506496109623 0.9438714419765777 ['ENSG00000119900|ENST00000370435|OGFRL1'] 92820 7243 RRLKHKRKK True PC9_epitope_Rep5 1248.83672564608 1248.8356299358602 32.824 2 -0.26896984520265876 0.06678085311856563 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 29171 12101 FTYKFAEEIRR True NCI_RA007_Epitope_Rep4 1458.7619485096197 1458.76084993586 53.544 2 -0.26898090664707247 0.06678085311856563 0.9438714419765777 ['ENSG00000006757|ENST00000381042|PNPLA4'] 109260 12112 TGAFPGTGI True NCI_RA007_Epitope_Rep5 819.41266830591 819.41211496793 53.244 1 -0.2690241366614565 0.06679664012535758 0.9438714419765777 ['LTR13A_dup7|chr1:43138776-43139741:+|1.4968869294777094|0.2457820778445239|2.61|497.0|50|2|anti-sense'] 19698 9444 ELSEQLGQA True H1975_Epitope_Rep3 973.47163973401 973.4710949679301 41.328 1 -0.2690445644507098 0.06679664012535758 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 137897 7377 YPNSGSVSA True PC9_epitope_Rep3 880.39266113732 880.3921149679301 33.385 1 -0.2691231569764722 0.06681120868709689 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 12393 20037 DKEFLPILQEE True PC9_epitope_Rep4 1359.69219718395 1359.6911099358601 85.21 2 -0.2691267563765191 0.06681120868709689 0.9438714419765777 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000463554.5_1_2:233599907-233635753:+|nuORF', 'GIGYF2-EFHD1|1|fusion'] 9197 9120 AVPEPSEDP True PC9_epitope_Rep1 939.41854153199 939.41744993586 39.931 2 -0.2691454352781844 0.06681120868709689 0.9438714419765777 ['nc|ENSG00000187867|A6NDB9|PALM3', 'ENSG00000187867|ENST00000669674|PALM3'] 125633 19343 VMFETYQF True PC9_epitope_Rep4 1063.46846892987 1063.46736993586 82.512 2 -0.2691613419408318 0.06682699314968664 0.9438714419765777 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 119644 15985 VESGALHVVI True PC9_epitope_Rep4 1022.5760452329 1022.57494993586 69.42 2 -0.2691806252963601 0.06682699314968664 0.9438714419765777 ['nc|ENSG00000042286|Q9BRQ8-2|AIFM2', 'ENSG00000042286|ENST00000307864|AIFM2'] 36452 21463 GVIQDFINA True PC9_epitope_Rep2 975.5025459394699 975.50144993586 88.03 2 -0.2692225725294164 0.06684277646201493 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 111695 14646 TLPPPHADSL True PC9_epitope_Rep4 1046.5396597241802 1046.53856993586 64.265 2 -0.26922310990053194 0.06684277646201493 0.9438714419765777 ['ENST00000459905.5_1_9:139835382-139837220:-|nuORF'] 129124 8833 VTCYLTWSP True PC9_epitope_Rep5 1068.49501803088 1068.49392993586 38.921 2 -0.2693493674151325 0.06685734064452663 0.9438714419765777 ['nc|ENSG00000100298|Q6NTF7-4|APOBEC3H', 'nc|ENSG00000100298|Q6NTF7-2|APOBEC3H', 'ENSG00000100298|ENST00000442487|APOBEC3H', 'nc|ENSG00000100298|Q6NTF7|APOBEC3H'] 91846 7355 RPNDSRMLVA True PC9_epitope_Rep5 1157.59752603681 1157.59588490379 33.249 3 -0.26939466248655025 0.06685734064452663 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 67387 3973 LTDVREQNKY True H1975_Epitope_Rep2 1264.6411646706 1264.63951490379 20.353 3 -0.2694571084034875 0.06685734064452663 0.9438714419765777 ['ENSG00000176208|ENST00000321990|ATAD5'] 68067 12240 LTNQQRYVL True PC9_epitope_Rep1 1133.61930702721 1133.61766490379 51.94 3 -0.26963962002289776 0.0668731214136078 0.9438714419765777 ['nc|ENSG00000091879|O15123-2|ANGPT2', 'ENSG00000091879|ENST00000629816|ANGPT2', 'nc|ENSG00000091879|O15123|ANGPT2'] 128856 19404 VSSLVQTGI True PC9_epitope_Rep1 902.50729696674 902.50618993586 79.449 2 -0.26967803927949235 0.0668731214136078 0.9438714419765777 ['ENSG00000184445|ENST00000333479|KNTC1'] 66432 12511 LSRNLYVVL True PC9_epitope_Rep2 1075.6389798426299 1075.6378899358601 53.432 2 -0.26968773062928214 0.06688646423432121 0.9438714419765777 ['ENST00000497660.5_1_1:8390216-8404070:+|nuORF', 'ENSG00000162426|ENST00000471889|SLC45A1'] 98905 10410 SIWLSRQKR True PC9_epitope_Rep1 1172.6778249628398 1172.67616490379 44.926 3 -0.26978344497331935 0.06688646423432121 0.9438714419765777 ['ENST00000453466.1_1_7:102939135-102952715:+|nuORF'] 5644 9308 APAGPALAQ True PC9_epitope_Rep5 794.42865272322 794.42754993586 40.756 2 -0.26979876944478504 0.06688646423432121 0.9438714419765777 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 21319 9137 ERKRMRNR True H1975_Epitope_Rep1 1144.6359772342 1144.63486993586 40.051 2 -0.2698409529289277 0.06688646423432121 0.9438714419765777 ['ENSG00000177606|ENST00000371222|JUN', 'JUN|p.I264M|1|0.25|ENSG00000177606|chr1:58782279-58782279|G/C|missense_variant'] 100626 6635 SLQPRPWRK True NCI_RA007_Epitope_Rep2 1166.6672602791398 1166.6656049037902 30.42 3 -0.2699001582475258 0.06690346083788706 0.9438714419765777 ['ENSG00000187833|ENST00000409561|C2orf78'] 75229 3906 NPKDNNQFASA True PC9_epitope_Rep4 1204.54726428576 1204.54616993586 21.215 2 -0.26993151003943033 0.06691801905178224 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant', 'ENST00000510181.5_1_3:139093277-139108392:-|nuORF'] 80491 21199 PLLGPAALYVP True PC9_epitope_Rep3 1109.64848189717 1109.64738993586 86.832 2 -0.26993747050609046 0.06691801905178224 0.9438714419765777 ['ENST00000409179.2_1_2:128100707-128145117:-|nuORF'] 115970 10209 TVQDLFGR True NCI_RA007_Epitope_Rep1 934.4872302284999 934.48612993586 43.722 2 -0.2699602979400298 0.06691801905178224 0.9438714419765777 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000508003.1_1_5:137895468-137897466:-|nuORF'] 100100 16609 SLKYLIGEV True PC9_epitope_Rep3 1020.5855472874399 1020.58444993586 69.023 2 -0.27011928766640003 0.06695078862055148 0.9438714419765777 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'ENST00000492261.5_1_12:124409716-124414381:+|nuORF'] 44159 22441 ILQFQFAEV True PC9_epitope_Rep1 1093.5807962601698 1093.5796899358602 91.141 2 -0.27012113036956303 0.06695078862055148 0.9438714419765777 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1'] 60374 20459 LIIGSIAGAIL True PC9_epitope_Rep2 1039.6641319613097 1039.66302993586 84.125 2 -0.27012502002891403 0.06695078862055148 0.9438714419765777 ['ENSG00000114948|ENST00000264377|ADAM23'] 112166 4879 TLVLSRSLT True NCI_RA007_Epitope_Rep3 988.59169529704 988.59058993586 26.176 2 -0.2701466699998353 0.06696656224958111 0.9438714419765777 ['ENSG00000214456|ENST00000381848|PLIN5'] 48333 14888 KDTSVLTFTFC True PC9_epitope_Rep1 1260.60602503184 1260.6049299358601 62.087 2 -0.27015384556389305 0.06696656224958111 0.9438714419765777 ['nc|ENSG00000259527|Q96N35|LINC00052'] 58918 11421 LFVGLAVGTL True NCI_RA007_Epitope_Rep3 988.5957180483199 988.59462993586 52.05 2 -0.2702086416795823 0.06698233472955746 0.9438714419765777 ['nc|ENSG00000148482|Q504Y0-5|SLC39A12', 'nc|ENSG00000148482|Q504Y0-3|SLC39A12', 'nc|ENSG00000148482|Q504Y0-4|SLC39A12', 'ENSG00000148482|ENST00000377369|SLC39A12'] 18259 2780 EISSHRYETP True H1975_Epitope_Rep2 1217.56766537717 1217.5660049037901 14.722 3 -0.27021986490881217 0.06698233472955746 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1'] 128256 7003 VSAEDLGG True PC9_epitope_Rep3 746.34464831574 746.34409496793 31.948 1 -0.2704526529790377 0.06701631701631702 0.9438714419765777 ['nc|ENSG00000131844|Q9HCC0-2|MCCC2', 'ENSG00000131844|ENST00000340941|MCCC2', 'ENST00000505435.3_1_5:70900220-70936922:+|nuORF', 'ENST00000510895.6_1_5:70898342-70931145:+|nuORF'] 40723 4849 HTSSSVSSSL True PC9_epitope_Rep1 990.4618033263001 990.46070993586 23.52 2 -0.2704861898671238 0.06701631701631702 0.9438714419765777 ['DACH2|p.P403L|1|0.22|ENSG00000126733|chrX:86739850-86739850|C/T|missense_variant'] 34108 6289 GPALPDRDR True H1975_Epitope_Rep3 995.51484195867 995.51374993586 29.196 2 -0.2705628041469048 0.06703086588363835 0.9438714419765777 ['ENST00000423600.1_1_3:195384570-195384792:-|nuORF'] 86095 12827 QPQLPYSQA True PC9_epitope_Rep4 1030.5083595959 1030.5072699358602 57.201 2 -0.2705667397103517 0.06703086588363835 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 63475 11956 LPHGFTNMA True PC9_epitope_Rep4 986.4643866089401 986.46328993586 53.778 2 -0.27058041402312155 0.06703086588363835 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 35235 7175 GSHSMRYFYT True NCI_RA007_Epitope_Rep5 1247.5393424543497 1247.53768490379 34.275 3 -0.27070381039034475 0.06704663401132618 0.9438714419765777 ['ENSG00000234745|ENST00000412585|HLA-B', 'HLA-B|p.G276Wfs*13|1|0.22|ENSG00000234745|chr6:31355387-31355388|-/T|frameshift_variant', 'ENST00000498007.1_1_6:31324459-31324935:-|nuORF'] 98928 22495 SIYGGFLLGV True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 94.758 2 -0.2707089534274762 0.06704663401132618 0.9438714419765777 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 106938 10570 SYKNSGVVVL True NCI_RA007_Epitope_Rep5 1064.5866099165999 1064.58550993586 47.293 2 -0.2707584040887776 0.06706240099054972 0.9438714419765777 ['nc|ENSG00000178773|Q9UBL6|CPNE7', 'ENSG00000178773|ENST00000319518|CPNE7', 'ENST00000532500.1_1_16:89651241-89653999:+|nuORF'] 37116 20449 GVSTITATSL True PC9_epitope_Rep3 948.51277627 948.51166993586 83.913 2 -0.27077091468116665 0.06706240099054972 0.9438714419765777 ['ENSG00000152942|ENST00000354868|RAD17', 'nc|ENSG00000152942|O75943|RAD17'] 26967 8345 FLKFKHYHT True NCI_RA007_Epitope_Rep4 1219.65021323267 1219.64857490379 38.914 3 -0.27079889126994516 0.06707572419569215 0.9438714419765777 ['ENST00000332290.3_1_6:170104364-170104589:+|nuORF'] 35706 8572 GTQWLWKP True NCI_RA007_Epitope_Rep2 1014.5287011176598 1014.52760993586 37.988 2 -0.27083803101179654 0.06707572419569215 0.9438714419765777 ['ENST00000424845.5_1_12:53564215-53567250:-|nuORF'] 126938 9987 VPVHDIYVSQ True PC9_epitope_Rep6 1155.59242357303 1155.5913299358601 48.968 2 -0.27084598489843886 0.06707572419569215 0.9438714419765777 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 77823 7629 PAEVSCSLS True H1975_Epitope_Rep3 891.40078329287 891.39968993586 34.327 2 -0.2708536441743501 0.06707572419569215 0.9438714419765777 ['ENST00000533507.5_1_11:47602194-47606030:+|nuORF'] 56991 10156 LEEDTYTGTV True H1975_Epitope_Rep2 1126.50299943194 1126.50190993586 44.065 2 -0.27090175900077806 0.06711091690335737 0.9438714419765777 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 52552 7920 KPSINYYQELK True NCI_RA007_Epitope_Rep2 1381.7241660185698 1381.7230699358602 35.44 2 -0.27092762498727746 0.0671279016841147 0.9438714419765777 ['ENST00000496851.6_1_6:167347386-167366008:-|nuORF'] 57691 19505 LENDIKVEI True PC9_epitope_Rep3 1071.58119018299 1071.58008993586 80.257 2 -0.27098737312781956 0.0671812984743109 0.9438714419765777 ['nc|ENSG00000153956|P54289-3|CACNA2D1', 'ENSG00000153956|ENST00000356860|CACNA2D1', 'nc|ENSG00000153956|P54289-4|CACNA2D1', 'nc|ENSG00000153956|P54289-5|CACNA2D1', 'nc|ENSG00000153956|P54289|CACNA2D1'] 77338 4708 NYKSHHLQL True NCI_RA007_Epitope_Rep4 1138.5883412521 1138.58668490379 24.538 3 -0.27106364440553105 0.06723224526206557 0.9438714419765777 ['nc|ENSG00000095485|Q69YN2-2|CWF19L1', 'nc|ENSG00000095485|Q69YN2-3|CWF19L1', 'ENSG00000095485|ENST00000354105|CWF19L1'] 120800 11894 VGDEDFVHL True NCI_RA007_Epitope_Rep4 1029.47672511445 1029.47562993586 52.749 2 -0.2710674235874275 0.06723224526206557 0.9438714419765777 ['ENSG00000160213|ENST00000291568|CSTB'] 100682 18101 SLQYETSNP True PC9_epitope_Rep1 1037.46655435357 1037.46544993586 74.418 2 -0.27110419201953934 0.06723224526206557 0.9438714419765777 ['nc|ENSG00000178177|Q8N3X6|LCORL', 'nc|ENSG00000178177|Q8N3X6-2|LCORL'] 137205 19401 YLEDGFAYV True PC9_epitope_Rep6 1075.48622716899 1075.4851299358602 87.281 2 -0.271311888114913 0.0672625332216842 0.9438714419765777 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'ENST00000490313.1_1_6:57244770-57299810:+|nuORF'] 102196 11419 SPSLSPALA True NCI_RA007_Epitope_Rep4 841.4545331178899 841.4539849679301 50.845 1 -0.27131913528076984 0.0672625332216842 0.9438714419765777 ['ENSG00000089558|ENST00000264661|KCNH4'] 8755 19784 AVEAQQFAL True PC9_epitope_Rep4 975.5025459394699 975.50199496793 84.226 1 -0.27132537575554017 0.0672625332216842 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11'] 85579 22514 QLLNWVYLSL True PC9_epitope_Rep1 1247.69140933831 1247.6903099358601 91.402 2 -0.2713374851728777 0.0672625332216842 0.9438714419765777 ['ENSG00000165424|ENST00000372336|ZCCHC24'] 62304 21762 LLQRAGLLL True PC9_epitope_Rep1 995.6491506035098 995.64804993586 88.541 2 -0.27135351619632586 0.0672625332216842 0.9438714419765777 ['ENSG00000162300|ENST00000294258|ZFPL1'] 78056 6001 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 28.078 2 -0.27138101241394064 0.06729649046162807 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 131845 5291 VYATRSSAVRL True NCI_RA007_Epitope_Rep3 1221.6829699129298 1221.68131490379 27.82 3 -0.27139498281514046 0.06729649046162807 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000485947.1_1_10:17271421-17272784:+|nuORF'] 78062 4854 PALPPQAH True PC9_epitope_Rep6 829.44463714053 829.44354993586 26.191 2 -0.27141654101493173 0.06731224289198733 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 9119 9717 AVLNEYLEQK True H1975_Epitope_Rep1 1205.62920300457 1205.62810993586 42.304 2 -0.27145136339420506 0.06731224289198733 0.9438714419765777 ['ENSG00000120280|ENST00000378962|TASL'] 42002 14881 IEDPLIVTP True H1975_Epitope_Rep1 995.55391280599 995.55280993586 62.474 2 -0.27157084006442234 0.06734742168586978 0.9438714419765777 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.P626Lfs*11|1|0.21|ENSG00000120539|chr10:27170834-27170834|C/-|frameshift_variant'] 105129 9100 STLPKSLSL True PC9_epitope_Rep6 944.55424715916 944.55314993586 45.088 2 -0.27158010633535484 0.06735704145888691 0.9438714419765777 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 6466 9797 APTAEGLAAA True PC9_epitope_Rep4 870.4446967101799 870.44358993586 45.325 2 -0.2715944731717347 0.06735704145888691 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 48533 7775 KEFPITEA True NCI_RA007_Epitope_Rep4 933.4807478657299 933.47964993586 36.588 2 -0.2715988812368804 0.06735704145888691 0.9438714419765777 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 106215 18146 SVPNKDVFQEL True PC9_epitope_Rep3 1274.65066672514 1274.6495699358602 75.0 2 -0.2716232102229146 0.06735704145888691 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 63474 11869 LPHGFTNMA True PC9_epitope_Rep4 986.4643866089401 986.46328993586 53.429 2 -0.27164537085608287 0.06735704145888691 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 45998 12316 ISTKQTAETI True PC9_epitope_Rep2 1090.58700383942 1090.5859099358602 52.686 2 -0.2717338672099604 0.06735704145888691 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant', 'MUC16|p.T2806Lfs*14|1|0.17|ENSG00000181143|chr19:8972724-8972724|G/-|frameshift_variant', 'MUC16|p.T1020Kfs*94|1|0.4|ENSG00000181143|chr19:8978077-8978080|ATGG/TTT|frameshift_variant', 'MUC16|p.G1889Efs*8|2|0.24|ENSG00000181143|chr19:8975473-8975473|C/-|frameshift_variant', 'MUC16|p.A1931Pfs*2|1|0.24|ENSG00000181143|chr19:8975348-8975348|C/-|frameshift_variant'] 123795 6102 VITIESQK True NCI_RA007_Epitope_Rep2 916.5229470308801 916.52184993586 28.341 2 -0.271822159591833 0.06735704145888691 0.9438714419765777 ['ENSG00000099381|ENST00000262519|SETD1A'] 116049 7921 TVRSDTSLI True PC9_epitope_Rep6 990.53457434374 990.53346993586 39.9 2 -0.27190657390798467 0.06739221431561322 0.9438714419765777 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1'] 118198 12130 VAVYRRAL True PC9_epitope_Rep3 946.5712346359797 946.57012993586 51.7 2 -0.27194977681442317 0.06739814764270248 0.9438714419765777 ['PEX5|p.A544V|1|0.28|ENSG00000139197|chr12:7209753-7209753|C/T|missense_variant'] 60715 20756 LIYRKLLP True PC9_epitope_Rep3 1014.6589870112199 1014.65788993586 85.107 2 -0.2719500221083618 0.06739814764270248 0.9438714419765777 ['chr8:40114873-40125442|125|21.34|0.21|6.66|+|0|TE_info:MLT2F,MLT2F_dup974,ERVL,LTR,acceptor,+,40125442,40125720|LINC02866,None|3'] 97895 13956 SHLTSNSYI True PC9_epitope_Rep3 1020.48762415132 1020.48652993586 58.758 2 -0.27197993531697 0.06739814764270248 0.9438714419765777 ['CSMD3|p.H805Y|1|0.36|ENSG00000164796|chr8:112685475-112685475|G/A|missense_variant'] 81331 5578 PPRPPPPPP True PC9_epitope_Rep3 950.5337864980999 950.53268993586 26.534 2 -0.2721014593786056 0.06739814764270248 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 121549 18433 VGKQGDLII True PC9_epitope_Rep2 941.5545815123298 941.55348993586 76.234 2 -0.27212301401144456 0.06739814764270248 0.9438714419765777 ['ENSG00000139344|ENST00000266736|AMDHD1'] 129888 4113 VTLSSRDSME True NCI_RA007_Epitope_Rep4 1123.51793830343 1123.5168499358601 22.104 2 -0.2721524577592403 0.06739814764270248 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 71056 6265 METAAAGLA True NCI_RA007_Epitope_Rep3 833.3953039896098 833.39475496793 31.645 1 -0.27215825458999926 0.06739814764270248 0.9438714419765777 ['KLHL11|p.S33L|1|0.4|ENSG00000178502|chr17:41865273-41865273|G/A|missense_variant'] 34340 10320 GPSGLLTYT True H1975_Epitope_Rep3 907.4650978015901 907.46400993586 44.748 2 -0.27217036501459885 0.06739814764270248 0.9438714419765777 ['CYB5R1|p.K238Nfs*34|1|0.14|ENSG00000159348|chr1:202963096-202963097|GC/-|frameshift_variant', 'ENSG00000159348|ENST00000367249|CYB5R1'] 55285 16195 LARDSLAL True PC9_epitope_Rep1 857.4970666362099 857.49596993586 67.111 2 -0.27219276272979087 0.06739814764270248 0.9438714419765777 ['SORL1|p.M2063Vfs*2|1|0.15|ENSG00000137642|chr11:121625100-121625101|AT/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF', 'SORL1|p.G687Vfs*4|1|0.3|ENSG00000137642|chr11:121549967-121549967|G/-|frameshift_variant'] 17777 21424 EHVLLVSIL True PC9_epitope_Rep3 1021.61718176889 1021.61608993586 87.699 2 -0.27227407670875736 0.06739814764270248 0.9438714419765777 ['ENSG00000146909|ENST00000275820|NOM1'] 111908 11930 TLRRYKNCEHK True NCI_RA007_Epitope_Rep5 1446.75140090926 1446.74974490379 52.546 3 -0.2723669340504688 0.06741511699843517 0.9438714419765777 ['ZNF43|p.K172Nfs*18|2|0.27|ENSG00000198521|chr19:21809521-21809521|T/-|frameshift_variant', 'ZNF43|p.Y342Tfs*77|1|0.25|ENSG00000198521|chr19:21809014-21809014|G/-|frameshift_variant', 'ZNF43|p.G712Afs*84|1|0.42|ENSG00000198521|chr19:21807902-21807902|C/-|frameshift_variant', 'nc|ENSG00000198521|P17038-2|ZNF43', 'ENSG00000198521|ENST00000354959|ZNF43'] 83514 17702 QDKEEVVL True PC9_epitope_Rep5 958.4971262058598 958.49602993586 73.107 2 -0.27240786189427374 0.0674490538573508 0.9438714419765777 ['ENSG00000077147|ENST00000371142|TM9SF3'] 128907 6406 VSTGDVNVE True NCI_RA007_Epitope_Rep4 918.42944056886 918.42834993586 31.242 2 -0.2724475741072237 0.0674490538573508 0.9438714419765777 ['CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'CON__P02535-1'] 69320 12937 LVPPDQPEV True PC9_epitope_Rep6 992.51786165044 992.51676993586 61.306 2 -0.2725338362578141 0.0674829882464248 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 101864 21027 SPLAVFGL True PC9_epitope_Rep2 802.45889022234 802.45778993586 86.334 2 -0.272575470959728 0.0674829882464248 0.9438714419765777 ['ATG4C|p.L211V|2|0.41|ENSG00000125703|chr1:62819241-62819241|C/G|missense_variant'] 56633 9378 LDYVIRPAP True H1975_Epitope_Rep1 1042.5811306133398 1042.58002993586 40.982 2 -0.27259692261674107 0.06749995451485545 0.9438714419765777 ['ENSG00000100335|ENST00000325301|MIEF1'] 39696 9886 HPTWALKEA True PC9_epitope_Rep3 1051.5450794577898 1051.54398993586 42.985 2 -0.27272021408009384 0.06755207859546984 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 68223 12253 LTQPHFMAL True PC9_epitope_Rep1 1056.54263692964 1056.5415299358601 51.991 2 -0.27274844680954025 0.06755207859546984 0.9438714419765777 ['nc|ENSG00000147044|O14936-3|CASK', 'nc|ENSG00000147044|O14936-4|CASK', 'nc|ENSG00000147044|O14936-6|CASK', 'nc|ENSG00000147044|O14936-2|CASK', 'ENSG00000147044|ENST00000378163|CASK', 'nc|ENSG00000147044|O14936-5|CASK'] 73418 13220 NESGELVAI True PC9_epitope_Rep4 930.4658260775799 930.46472993586 58.747 2 -0.27280072417735596 0.06760542881053742 0.9438714419765777 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 889 4022 ADLSPGDKGP True NCI_RA007_Epitope_Rep2 955.4610750503099 955.45996993586 20.283 2 -0.2728138412405008 0.06762239161678825 0.9438714419765777 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD'] 43950 8405 ILEYDTIRQE True NCI_RA007_Epitope_Rep1 1278.6455813446998 1278.64448993586 36.696 2 -0.27284258422013763 0.06763689285064581 0.9438714419765777 ['ENSG00000274443|ENST00000624510|C8orf89'] 91089 27056 RLLRHIILLRI True PC9_epitope_Rep1 1414.9612574528599 1414.9601699358602 110.35 2 -0.2728570974194963 0.06763689285064581 0.9438714419765777 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 131575 11326 VVVSKGLTI True PC9_epitope_Rep5 914.5800679841799 914.57896993586 48.56 2 -0.2728669322285181 0.06763689285064581 0.9438714419765777 ['ENST00000477132.1_1_2:37544174-37551396:-|nuORF'] 110280 20544 TIGKCIYLF True PC9_epitope_Rep1 1056.56778904832 1056.56668993586 83.834 2 -0.27293624901144187 0.06765262315360547 0.9438714419765777 ['ENST00000485996.1_1_14:21944657-21945031:-|nuORF'] 89154 6287 REHGIRLLEA True NCI_RA007_Epitope_Rep1 1192.66765420196 1192.66600490379 28.485 3 -0.2729878349847643 0.06765262315360547 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant', 'ENSG00000261150|ENST00000615648|EPPK1'] 26195 7508 FHSNDGGNVL True PC9_epitope_Rep4 1058.47812209678 1058.4770299358602 36.246 2 -0.273034889136507 0.06766342900796682 0.9438714419765777 ['ENSG00000162434|ENST00000342505|JAK1'] 67761 14683 LTGTWTSV True PC9_epitope_Rep4 863.43888305375 863.43778993586 64.413 2 -0.2730538958264108 0.06766342900796682 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 64599 10087 LREERAYIL True PC9_epitope_Rep4 1161.6506071554898 1161.64897490379 46.471 3 -0.2730550677090801 0.06766342900796682 0.9438714419765777 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4', 'ENST00000461540.2_1_2:62096624-62104153:-|nuORF'] 72694 13454 MYLKTVDKF True PC9_epitope_Rep1 1143.5998174525898 1143.59872993586 56.609 2 -0.2730639190876947 0.06766342900796682 0.9438714419765777 ['nc|ENSG00000196459|P0DI81-2|TRAPPC2', 'ENSG00000256060|ENST00000543226|TRAPPC2B', 'ENSG00000196459|ENST00000380579|TRAPPC2', 'nc|ENSG00000196459|P0DI81-3|TRAPPC2'] 75632 9296 NQSDTSVSL True PC9_epitope_Rep6 949.43525422529 949.4347049679301 45.919 1 -0.27306892232177893 0.06766342900796682 0.9438714419765777 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167417751-167458021:+|nuORF'] 101118 22284 SLVFGNYLV True PC9_epitope_Rep3 1010.5436824754598 1010.54258993586 91.002 2 -0.27307508499456135 0.06766342900796682 0.9438714419765777 ['ENSG00000146409|ENST00000275227|SLC18B1', 'ENST00000460518.1_1_6:133108648-133118195:-|nuORF'] 99508 7097 SLESHNISL True PC9_epitope_Rep4 998.50327421546 998.50216993586 34.565 2 -0.27317461196084963 0.06769611320274277 0.9438714419765777 ['nc|ENSG00000170571|Q6PCB8-2|EMB', 'ENSG00000170571|ENST00000303221|EMB'] 43536 18096 IIDQVNPEL True PC9_epitope_Rep5 1039.5549754351498 1039.5538699358601 74.618 2 -0.27319530231391087 0.06769611320274277 0.9438714419765777 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20', 'ENST00000494633.1_1_20:419232-422368:-|nuORF', 'ENSG00000125875|ENST00000354200|TBC1D20', 'nc|ENSG00000125875|Q96BZ9-3|TBC1D20'] 67757 15956 LTGTWTSV True PC9_epitope_Rep1 863.43888305375 863.43778993586 66.184 2 -0.2731961149137809 0.06769611320274277 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 3927 6506 AHDQFKSTL True PC9_epitope_Rep5 1045.51925863277 1045.5181699358602 29.998 2 -0.2732069150519736 0.06771183820453595 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 41030 16021 HYHRSVIEWEI True PC9_epitope_Rep1 1467.72589735407 1467.72424490379 66.438 3 -0.2732136719202185 0.06771183820453595 0.9438714419765777 ['NWD1|p.G1273Afs*12|2|0.44|ENSG00000188039|chr19:16807665-16807665|G/-|frameshift_variant', 'ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1', 'NWD1|p.L337Pfs*20|1|0.12|ENSG00000188039|chr19:16749645-16749646|-/C|frameshift_variant'] 75562 19133 NQMDGFDTL True PC9_epitope_Rep4 1039.4280606698699 1039.42747496793 81.689 1 -0.27335430612154454 0.06772756206238065 0.9438714419765777 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000504847.1_1_5:33971458-33972451:+|nuORF', 'ENST00000216407.4_1_12:68867655-68868498:+|nuORF'] 16344 23110 EEKLTLMLL True PC9_epitope_Rep1 1088.61513316356 1088.6140299358601 93.695 2 -0.2733627740192025 0.06772756206238065 0.9438714419765777 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.G1782Afs*21|1|0.22|ENSG00000160299|chr21:46411414-46411414|G/-|frameshift_variant'] 125801 12296 VNLLREQL True PC9_epitope_Rep4 983.5763795860698 983.57528993586 55.111 2 -0.27346928666489984 0.06776270323355035 0.9438714419765777 ['ENSG00000204889|ENST00000377755|KRT40', 'CON__Q6IFU5', 'chr17:40981151-40982307|126|24.6|0.36|6.11|-|0|KRT40,KRT40|1'] 86454 10753 QQRRWQWVPVV True PC9_epitope_Rep3 1480.80515073428 1480.8034949037901 46.315 3 -0.2735837818525916 0.06781479595548119 0.9438714419765777 ['ENST00000346169.6_1_3:184052699-184052807:+|nuORF'] 43939 6343 ILEQDQQDKT True NCI_RA007_Epitope_Rep2 1216.5935457718397 1216.59244993586 29.279 2 -0.27364646968675144 0.06781479595548119 0.9438714419765777 ['ENSG00000173451|ENST00000308086|THAP2'] 112711 12131 TPHFSGLAA True PC9_epitope_Rep1 899.4501164437899 899.44900993586 51.524 2 -0.2736887325730557 0.06782558097246973 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 11428 18728 DFQDSVFNDL True H1975_Epitope_Rep2 1198.51423282198 1198.5131299358602 77.742 2 -0.2736981423797333 0.06782558097246973 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 106707 20713 SYATLLHVL True PC9_epitope_Rep3 1015.5702315764698 1015.56912993586 84.946 2 -0.27370493572552956 0.06782558097246973 0.9438714419765777 ['ENSG00000183840|ENST00000329321|GPR39'] 5643 8364 APAGPALAQ True PC9_epitope_Rep4 794.42865272322 794.42754993586 39.631 2 -0.27370596678250475 0.06782558097246973 0.9438714419765777 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 28325 23224 FSAELLVLYF True PC9_epitope_Rep5 1200.6430621635598 1200.64196993586 94.314 2 -0.27371150371012193 0.06782558097246973 0.9438714419765777 ['VCAM1|p.P697A|2|0.3|ENSG00000162692|chr1:100738152-100738152|C/G|missense_variant'] 126419 18603 VPLLKIEEP True H1975_Epitope_Rep2 1036.6168474157198 1036.61574993586 77.206 2 -0.27372879957138874 0.06782558097246973 0.9438714419765777 ['ENSG00000243708|ENST00000458483|PLA2G4B', 'nc|ENSG00000243708|P0C869-8|PLA2G4B', 'nc|ENSG00000243708|P0C869-6|PLA2G4B', 'nc|ENSG00000243708|P0C869-4|PLA2G4B', 'nc|ENSG00000243708|P0C869-7|PLA2G4B'] 4894 9441 ALGKEEIAL True NCI_RA007_Epitope_Rep5 942.5385970950198 942.53750993586 42.952 2 -0.2737502286785982 0.0678400640034911 0.9438714419765777 ['ENSG00000100441|ENST00000553935|KHNYN'] 88788 7707 RDQEEERRERW True NCI_RA007_Epitope_Rep3 1587.7502146089496 1587.7491099358601 37.437 2 -0.27375903960589815 0.0678400640034911 0.9438714419765777 ['ENSG00000159450|ENST00000614923|TCHH'] 31709 9628 GEIPKVLVA True NCI_RA007_Epitope_Rep3 924.5644179200399 924.56332993586 44.952 2 -0.2737646028129117 0.0678400640034911 0.9438714419765777 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'nc|ENSG00000183020|O94973-3|AP2A2', 'AP2A2-PSMD13|2|fusion', 'AP2A2-PSMD13|3|fusion', 'AP2A2-PSMD13|1|fusion', 'nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2'] 77672 12151 PAAAAAMEAMP True H1975_Epitope_Rep2 1029.4623380036098 1029.46124993586 51.823 2 -0.2738077791528294 0.06785331175796804 0.9438714419765777 ['ENST00000325192.7_1_14:45366516-45366663:+|nuORF'] 98354 6125 SIHENFSQA True PC9_epitope_Rep2 1031.4672230599099 1031.4661299358602 28.954 2 -0.27380975040822464 0.06785331175796804 0.9438714419765777 ['ENSG00000125633|ENST00000376300|CCDC93'] 69049 17013 LVIFQVTGI True PC9_epitope_Rep4 988.5957180483199 988.59462993586 73.433 2 -0.2738112920190507 0.06785331175796804 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2'] 126942 10324 VPVKAKNV True PC9_epitope_Rep2 853.53853752537 853.53744993586 45.039 2 -0.27381809603998447 0.06785331175796804 0.9438714419765777 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232323706-232327997:-|nuORF'] 16534 3819 EEQDPSPEA True H1975_Epitope_Rep3 1000.3985343633999 1000.39742993586 19.787 2 -0.273909012620038 0.06792480273444602 0.9438714419765777 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9', 'ENST00000550699.5_1_12:58109828-58111744:+|nuORF'] 129863 19388 VTLNPAENI True PC9_epitope_Rep4 969.51311062317 969.51200993586 82.686 2 -0.2739463540549811 0.06793804312256845 0.9438714419765777 ['TPH2|p.P138A|1|0.22|ENSG00000139287|chr12:71944450-71944450|C/G|missense_variant'] 125192 14350 VLQGAVPTV True PC9_epitope_Rep6 882.51746772762 882.51636993586 67.094 2 -0.2739641893638184 0.06793804312256845 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 82813 20939 PVSITQDIL True PC9_epitope_Rep2 984.54916177872 984.54806993586 85.989 2 -0.2739770802379256 0.06793804312256845 0.9438714419765777 ['ENSG00000171811|ENST00000368586|CFAP46'] 62794 6396 LMETNTEP True H1975_Epitope_Rep2 933.41134797657 933.41024993586 29.526 2 -0.273991278110137 0.06793804312256845 0.9438714419765777 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'CAMK2D-ANK2|1|fusion', 'CAMK2D-ANK2|2|fusion', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2', 'nc|ENSG00000145362|Q01484-7|ANK2'] 43379 9511 IHPKGVIP True PC9_epitope_Rep3 859.5279728416699 859.52686993586 41.531 2 -0.27405485154442427 0.06795498754703946 0.9438714419765777 ['ENSG00000175985|ENST00000322564|PLEKHD1'] 118744 4290 VEDLEQERD True NCI_RA007_Epitope_Rep2 1131.50439641427 1131.50328993586 21.326 2 -0.27413365824286334 0.06804217415015451 0.9438714419765777 ['MAPRE1|p.K212Q|1|0.15|ENSG00000101367|chr20:32846654-32846654|A/C|missense_variant'] 19904 16615 ELWTHAQVV True PC9_epitope_Rep6 1081.55564414149 1081.5545499358602 76.373 2 -0.2741341113124308 0.06804217415015451 0.9438714419765777 ['ENSG00000265203|ENST00000584701|RBP3'] 324 11300 AAIGALQEA True PC9_epitope_Rep6 842.4497820906199 842.44868993586 54.481 2 -0.2741464315961852 0.06804217415015451 0.9438714419765777 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENST00000497682.1_1_3:109128527-109128830:-|nuORF', 'ENSG00000268799|ENST00000600799|H3Y2', 'ENSG00000269466|ENST00000598383|H3Y1', 'ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'H3-3B|p.Q86H|1|0.32|ENSG00000132475|chr17:75778834-75778834|C/A|missense_variant'] 44640 15239 IPKGWTSFI True H1975_Epitope_Rep3 1047.57531695691 1047.5742099358602 64.024 2 -0.27415514534139146 0.06805911544963734 0.9438714419765777 ['ENSG00000087842|ENST00000380420|PIR'] 7806 13077 ATAAALAPGL True PC9_epitope_Rep1 854.48616759934 854.48506993586 55.168 2 -0.27418273935659804 0.06807481867922127 0.9438714419765777 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.Q2344Kfs*48|2|0.43|ENSG00000091656|chr8:76853949-76853949|C/-|frameshift_variant', 'ZFHX4|p.P2910Qfs*27|1|0.24|ENSG00000091656|chr8:76855647-76855647|C/-|frameshift_variant', 'ZFHX4|p.A2982Qfs*10|1|0.33|ENSG00000091656|chr8:76855863-76855863|G/-|frameshift_variant', 'ZFHX4|p.N1257Kfs*31|1|0.25|ENSG00000091656|chr8:76849634-76849635|-/A|frameshift_variant', 'ZFHX4|p.K1442Nfs*10|1|0.42|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant', 'nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 31390 5331 GEASPPAPP True NCI_RA007_Epitope_Rep4 821.3919328613299 821.39082993586 27.071 2 -0.27418862480226036 0.06807481867922127 0.9438714419765777 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 22755 12251 EVAPRALSV True PC9_epitope_Rep4 940.5341804209199 940.53308993586 54.94 2 -0.27422217657412584 0.06810498382347595 0.9438714419765777 ['chr18:23541433-23543500|101|16.25|0.55|4.89|-|2|NPC1,None|1'] 43947 18209 ILETLEVP True PC9_epitope_Rep1 912.5167990212799 912.51570993586 74.833 2 -0.2742542514354587 0.06810498382347595 0.9438714419765777 ['ENST00000484352.5_1_2:74758074-74758502:+|nuORF', 'ENST00000258080.7_1_2:74758074-74758736:+|nuORF'] 13386 5902 DNIQGITK True PC9_epitope_Rep3 887.47124581119 887.47014993586 27.764 2 -0.27425829963022247 0.06810498382347595 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12', 'ENSG00000275663|ENST00000611444|H4C7', 'H4C6|p.A34T|1|0.13|ENSG00000274618|chr6:26240525-26240525|G/A|missense_variant'] 83271 7314 QAESPLGIRP True H1975_Epitope_Rep2 1066.5771078620598 1066.5760099358602 33.073 2 -0.2742672666869737 0.06810498382347595 0.9438714419765777 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000514104.5_1_5:145522433-145523105:-|nuORF', 'ENST00000512412.1_1_5:145519224-145523084:-|nuORF'] 97567 10760 SGVSLAALK True PC9_epitope_Rep4 844.50181766348 844.50072993586 49.145 2 -0.2742776008903612 0.06810498382347595 0.9438714419765777 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'H1-4|p.R54C|1|0.12|ENSG00000168298|chr6:26156550-26156550|C/T|missense_variant'] 59261 15136 LGGQLNVSV True PC9_epitope_Rep4 885.4919812557699 885.49088993586 66.148 2 -0.27435067092704607 0.068136381810912 0.9438714419765777 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1'] 54849 19848 LAGCSLTTWVP True PC9_epitope_Rep2 1146.5743309807401 1146.5732299358601 81.737 2 -0.27435808436695347 0.068136381810912 0.9438714419765777 ['ENST00000564704.5_1_16:67286600-67286678:+|nuORF'] 9677 19443 AYGSLFNTI True PC9_epitope_Rep6 984.4916469026 984.49109496793 87.449 1 -0.27438744472532034 0.068136381810912 0.9438714419765777 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3', 'nc|ENSG00000137944|Q6YP21-2|KYAT3', 'ENST00000446900.6_1_1:89430347-89454033:-|nuORF'] 33007 20849 GIVTAVVLG True PC9_epitope_Rep2 827.5116540711899 827.51054993586 85.642 2 -0.27439939160167093 0.068136381810912 0.9438714419765777 ['nc|ENSG00000197965|O95297-2|MPZL1', 'ENST00000474729.5_1_1:167734818-167757155:+|nuORF', 'ENSG00000197965|ENST00000359523|MPZL1', 'nc|ENSG00000197965|O95297-4|MPZL1', 'nc|ENSG00000197965|O95297-3|MPZL1', 'ENST00000465787.5_1_1:167691238-167742606:+|nuORF'] 100834 7096 SLSAGPAVAA True NCI_RA007_Epitope_Rep4 842.4497820906199 842.44868993586 33.916 2 -0.2744593406863665 0.06816777523352598 0.9438714419765777 ['ENST00000315872.10_1_2:11484261-11484312:-|nuORF'] 52514 4141 KPPPPPPPP True H1975_Epitope_Rep2 922.5276384884999 922.52654993586 21.02 2 -0.2744829991199041 0.06816777523352598 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 13105 13511 DLSFTEEGY True H1975_Epitope_Rep3 1059.43967089939 1059.4385699358602 57.248 2 -0.27448976238251477 0.06816777523352598 0.9438714419765777 ['nc|ENSG00000183454|Q12879-2|GRIN2A', 'ENSG00000183454|ENST00000330684|GRIN2A'] 40706 4782 HTQREKIT True PC9_epitope_Rep1 1011.5461420869499 1011.54504993586 23.263 2 -0.2744924994401744 0.06816777523352598 0.9438714419765777 ['ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 1350 15910 AEEDVYWLSA True H1975_Epitope_Rep2 1181.52406922969 1181.5229699358601 66.398 2 -0.2745325168384701 0.06820288222145492 0.9438714419765777 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47666536-47687014:-|nuORF'] 19828 9701 ELVAEEDQDP True H1975_Epitope_Rep2 1143.4931630242297 1143.4920699358602 42.299 2 -0.2745559813610745 0.06821857566010649 0.9438714419765777 ['ENSG00000239697|ENST00000293825|TNFSF12', 'nc|ENSG00000239697|O43508-2|TNFSF12'] 133919 16630 WNPRRWWRWCW True PC9_epitope_Rep2 1730.8153385785 1730.81368490379 69.212 3 -0.2746062014795698 0.06821857566010649 0.9438714419765777 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 58870 10160 LFSLSQRKR True PC9_epitope_Rep1 1133.66692592597 1133.66527490379 43.956 3 -0.27467608569684354 0.06825367981101217 0.9438714419765777 ['ENSG00000205277|ENST00000536621|MUC12', 'nc|ENSG00000205277|Q9UKN1|MUC12'] 11404 9523 DFKYVADSP True H1975_Epitope_Rep1 1040.48147614172 1040.4803699358602 41.552 2 -0.27470977225017074 0.06826813003107227 0.9438714419765777 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 140490 21271 YYIFIPSKF True PC9_epitope_Rep3 1176.6219327961599 1176.62029490379 87.113 3 -0.2747466891696377 0.06826813003107227 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF', 'ENST00000542123.5_1_12:12966301-12976268:+|nuORF'] 133969 18622 WPHRYLTYRYF True H1975_Epitope_Rep1 1600.7939173442398 1600.79282993586 77.664 2 -0.2747575635790699 0.06826813003107227 0.9438714419765777 ['ENSG00000174792|ENST00000311623|ODAPH'] 55174 16531 LAPCHMITV True PC9_epitope_Rep1 983.49324420907 983.49214993586 68.41 2 -0.2748031461260605 0.06828257867577586 0.9438714419765777 ['ENST00000492095.5_1_1:16785414-16785925:+|nuORF'] 14491 8229 DTVNVEIQA True H1975_Epitope_Rep2 987.4872897981498 987.48618993586 36.604 2 -0.27481514211263963 0.06828257867577586 0.9438714419765777 ['nc|ENSG00000140481|Q8N5R6|CCDC33', 'nc|ENSG00000140481|Q8N5R6-2|CCDC33', 'ENSG00000140481|ENST00000398814|CCDC33'] 101041 13300 SLTLLQSNT True PC9_epitope_Rep1 975.52367530687 975.52256993586 56.022 2 -0.2748252681576908 0.06828257867577586 0.9438714419765777 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2', 'nc|ENSG00000166473|Q7Z442-4|PKD1L2', 'ENST00000299598.11_1_16:81199358-81222588:-|nuORF', 'nc|ENSG00000166473|Q7Z442-3|PKD1L2', 'ENST00000533478.5_1_16:81174978-81214887:-|nuORF', 'nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 126839 12691 VPTAFSSSVP True H1975_Epitope_Rep1 990.5022115863 990.50110993586 53.872 2 -0.2748793766575187 0.06831767719897523 0.9438714419765777 ['ENSG00000147206|ENST00000395065|NXF3', 'ENST00000497850.5_1_X:102331220-102334875:-|nuORF'] 74571 20133 NLDFIEVNV True PC9_epitope_Rep3 1061.53932537101 1061.53822993586 82.695 2 -0.2749336695569908 0.06835153254964661 0.9438714419765777 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 4760 7891 ALEEGQPPFKW True H1975_Epitope_Rep1 1300.6451874218797 1300.6440899358602 35.304 2 -0.27495007484300654 0.06835153254964661 0.9438714419765777 ['ENST00000222990.7_1_7:2293201-2294050:-|nuORF'] 116252 12479 TVVAQLKQL True PC9_epitope_Rep6 998.6124307416198 998.61132993586 59.422 2 -0.2750005031106114 0.06836845930232559 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 133971 19192 WPHRYLTYRYF True NCI_RA007_Epitope_Rep1 1600.7939173442398 1600.79282993586 78.8 2 -0.27512224259283735 0.06838290064131679 0.9438714419765777 ['ENSG00000174792|ENST00000311623|ODAPH'] 139966 8224 YVIRDEVEK True H1975_Epitope_Rep1 1149.6029882567298 1149.60188993586 36.577 2 -0.2751534235809157 0.06838290064131679 0.9438714419765777 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48'] 57248 20255 LEFMTNSSL True PC9_epitope_Rep2 1040.48484727 1040.48374993586 83.332 2 -0.2752015069407674 0.06838290064131679 0.9438714419765777 ['ENST00000505025.1_1_4:184908904-184909039:+|nuORF'] 20220 8598 ENTRRPYFP True H1975_Epitope_Rep3 1178.5832558716597 1178.5821499358601 38.064 2 -0.2752377987974837 0.06839609787999346 0.9438714419765777 ['CFHR4|p.T541Kfs*30|2|0.26|ENSG00000134365|chr1:196918294-196918294|C/-|frameshift_variant', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4'] 98572 20351 SIMIQNVDV True PC9_epitope_Rep3 1017.51648175145 1017.51538993586 83.528 2 -0.27525936713895105 0.06839609787999346 0.9438714419765777 ['nc|ENSG00000183715|Q14982-4|OPCML', 'nc|ENSG00000183715|Q14982|OPCML', 'nc|ENSG00000183715|Q14982-3|OPCML', 'ENST00000529038.5_1_11:132290089-133402241:-|nuORF', 'ENSG00000183715|ENST00000524381|OPCML'] 17881 7327 EIDIEGELQK True H1975_Epitope_Rep1 1172.5924831426798 1172.5913899358602 33.192 2 -0.27526837066565246 0.06839609787999346 0.9438714419765777 ['ENSG00000035687|ENST00000366535|ADSS2'] 99275 11512 SLDEFRQTWKL True PC9_epitope_Rep5 1421.73031402817 1421.72866490379 49.277 3 -0.2752826570610995 0.06839609787999346 0.9438714419765777 ['ENSG00000156194|ENST00000286719|PPEF2'] 116195 13124 TVTNAVVTV True PC9_epitope_Rep4 902.50729696674 902.5067449679301 58.377 1 -0.27543069392508424 0.06844810986575596 0.9438714419765777 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000532167.5_1_11:122930757-122931830:-|nuORF', 'ENST00000454171.1_1_7:84657519-84657798:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 117784 21436 VALRYVWPL True PC9_epitope_Rep5 1115.64915060351 1115.6480499358602 87.517 2 -0.2754689386488748 0.06844810986575596 0.9438714419765777 ['nc|ENSG00000198910|P32004-3|L1CAM', 'nc|ENSG00000198910|P32004-2|L1CAM', 'ENSG00000198910|ENST00000370060|L1CAM', 'ENST00000460553.1_1_X:153138617-153141318:-|nuORF'] 108288 5331 TECFWGCELGK True NCI_RA007_Epitope_Rep1 1271.53148019259 1271.52982490379 24.815 3 -0.27553072409565715 0.06846503178928247 0.9438714419765777 ['ENST00000508293.5_1_4:48833419-48834642:+|nuORF'] 96988 11310 SEVM[Oxidation]EELEKVK True H1975_Epitope_Rep1 1335.6591831839498 1335.65808993586 48.481 2 -0.27554076507555947 0.06849762955697238 0.9438714419765777 ['ENSG00000114446|ENST00000264538|IFT57'] 12628 17014 DLEEKFRANAS True NCI_RA007_Epitope_Rep2 1278.62042922602 1278.6193299358602 70.916 2 -0.2755480235581323 0.06849762955697238 0.9438714419765777 ['ENSG00000102794|ENST00000377462|ACOD1'] 94288 11341 RWSQPWRWRYW True NCI_RA007_Epitope_Rep1 1705.8378478448897 1705.8361949037903 48.086 3 -0.2756229575138394 0.06849762955697238 0.9438714419765777 ['ENST00000380009.8_1_5:94890875-94891094:+|nuORF'] 138667 7620 YRSRKKHLI True NCI_RA007_Epitope_Rep4 1199.7251095084298 1199.7234749037902 35.964 3 -0.27565744929627317 0.06853146853146853 0.9438714419765777 ['nc|ENSG00000244005|Q9Y697-2|NFS1', 'ENSG00000244005|ENST00000374092|NFS1'] 115493 9346 TVGEITDALKK True NCI_RA007_Epitope_Rep1 1173.6605031328497 1173.6594099358601 40.347 2 -0.27567168342348436 0.06853146853146853 0.9438714419765777 ['ENSG00000146085|ENST00000274813|MMUT'] 119572 14023 VERKGEVL True PC9_epitope_Rep1 928.5341804209198 928.53308993586 58.779 2 -0.27571599284646836 0.06858471374600407 0.9438714419765777 ['ENSG00000124508|ENST00000356709|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'nc|ENSG00000112763|Q7KYR7-3|BTN2A1', 'ENST00000377600.6_1_6:26463094-26468774:+|nuORF', 'nc|ENSG00000112763|Q7KYR7-5|BTN2A1', 'ENSG00000112763|ENST00000312541|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-1|BTN2A1'] 15757 9528 EDEEYDEEDY True H1975_Epitope_Rep2 1334.4310162601398 1334.42990993586 41.621 2 -0.27572090070836947 0.068596647354752 0.9438714419765777 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152', 'ENST00000559630.1_1_15:49097750-49103222:-|nuORF', 'ENST00000559444.1_1_15:49090143-49103222:-|nuORF'] 30746 16312 GANTLFQFPSV True PC9_epitope_Rep5 1179.59242357303 1179.5913299358601 67.74 2 -0.27575541639103024 0.068596647354752 0.9438714419765777 ['ENSG00000158711|ENST00000357992|ELK4'] 129815 12103 VTLDTWWRQR True H1975_Epitope_Rep3 1359.7047679866698 1359.70366993586 51.72 2 -0.2757561539830722 0.068596647354752 0.9438714419765777 ['CSF3R|p.R337T|1|0.56|ENSG00000119535|chr1:36472127-36472127|C/G|missense_variant'] 81733 13058 PSAPVPLAS True PC9_epitope_Rep1 837.45961849833 837.45852993586 55.095 2 -0.27581269996512925 0.068596647354752 0.9438714419765777 ['nc|ENSG00000187821|A6NFD8-4|HELT', 'ENSG00000187821|ENST00000515777|HELT'] 140301 11903 YYDPHQATF True PC9_epitope_Rep2 1140.48762415132 1140.48652993586 51.109 2 -0.2758205211968299 0.068596647354752 0.9438714419765777 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1', 'PCNX1|p.S602Vfs*6|1|0.21|ENSG00000100731|chr14:70978141-70978144|TCTA/-|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-2|PCNX1', 'ENST00000554879.5_1_14:71374480-71476401:+|nuORF'] 91088 25989 RLLRHIILLRI True NCI_RA007_Epitope_Rep2 1414.9612574528599 1414.9601699358602 110.25 2 -0.27588052326248774 0.06864988558352403 0.9438714419765777 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 123784 15271 VITAMVISSI True PC9_epitope_Rep4 1032.58891841572 1032.58782993586 66.67 2 -0.275952143319509 0.06870312187857545 0.9438714419765777 ['ENSG00000136052|ENST00000258538|SLC41A2'] 115765 9982 TVLREDQL True PC9_epitope_Rep2 972.5240096600398 972.52290993586 43.726 2 -0.2759821205987572 0.0687150432192925 0.9438714419765777 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 106987 16784 SYLERHGLINF True PC9_epitope_Rep4 1347.6935345966297 1347.69187490379 72.528 3 -0.2759950597851802 0.0687150432192925 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 63957 9494 LQAEASGWGSY True PC9_epitope_Rep1 1167.5196525555898 1167.5185499358602 41.375 2 -0.27601493551902356 0.0687150432192925 0.9438714419765777 ['ENST00000413916.5_1_7:44807309-44807855:+|nuORF'] 72593 7628 MVRPVAVAA True PC9_epitope_Rep6 912.5215075622399 912.52040993586 38.643 2 -0.2760998066885977 0.0687150432192925 0.9438714419765777 ['ENST00000373930.3_1_9:123476659-123476740:-|nuORF'] 92255 3201 RQKRLQEAL True NCI_RA007_Epitope_Rep3 1140.6727395823998 1140.67108490379 17.883 3 -0.27610080983925744 0.0687150432192925 0.9438714419765777 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'ENSG00000122786|ENST00000361675|CALD1', 'nc|ENSG00000122786|Q05682-5|CALD1', 'nc|ENSG00000122786|Q05682-3|CALD1'] 3541 8436 AGLYKENLLL True NCI_RA007_Epitope_Rep3 1132.6492101731599 1132.64810993586 40.268 2 -0.27616235738532086 0.06873195445713559 0.9438714419765777 ['ENSG00000206190|ENST00000555815|ATP10A'] 86206 9501 QPVSGTQVV True PC9_epitope_Rep1 913.48689587533 913.4863449679301 41.401 1 -0.27619218152557157 0.06874761671297053 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 20769 12407 EQLQALEAL True H1975_Epitope_Rep2 1013.5393253710098 1013.53822993586 52.809 2 -0.2761931473076766 0.06874761671297053 0.9438714419765777 ['ENSG00000063515|ENST00000086933|GSC2'] 74773 22278 NLLTVIQL True PC9_epitope_Rep4 912.5644179200399 912.56386496793 93.932 1 -0.27624894051267 0.06885031592708257 0.9438714419765777 ['nc|ENSG00000147874|Q7Z4H7-2|HAUS6', 'nc|ENSG00000147874|Q7Z4H7-3|HAUS6', 'ENSG00000147874|ENST00000380502|HAUS6'] 136146 14537 YGGPVGAGI True PC9_epitope_Rep3 789.4021036222099 789.4015549679301 61.037 1 -0.27627044424534736 0.06885031592708257 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7'] 140004 22456 YVLDDLIVA True PC9_epitope_Rep3 1019.5539128059899 1019.55337496793 91.654 1 -0.27628899635918924 0.06885031592708257 0.9438714419765777 ['ENSG00000180104|ENST00000512944|EXOC3'] 140659 20720 YYPNPPLVL True PC9_epitope_Rep4 1074.57498260374 1074.57447496793 87.862 1 -0.276310874326633 0.06885031592708257 0.9438714419765777 ['ENSG00000178425|ENST00000319550|NT5DC1', 'nc|ENSG00000178425|Q5TFE4-2|NT5DC1'] 84037 8080 QEPKNSEPHDP True H1975_Epitope_Rep2 1276.5683936531598 1276.5672899358601 36.027 2 -0.2763603927742221 0.06885031592708257 0.9438714419765777 ['RTL3|p.Q159H|1|0.66|ENSG00000179300|chrX:78657944-78657944|C/A|missense_variant'] 44867 8809 IQALGEHLK True NCI_RA007_Epitope_Rep1 1007.57637958607 1007.57528993586 38.266 2 -0.2763899037222033 0.0688659718944043 0.9438714419765777 ['ENSG00000112237|ENST00000520429|CCNC', 'ENST00000523639.5_1_6:99998829-100016472:-|nuORF'] 64291 6355 LQLSPHQIQA True NCI_RA007_Epitope_Rep2 1133.6193070272102 1133.61820993586 29.325 2 -0.27640362754135855 0.0688659718944043 0.9438714419765777 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 20578 12228 EQEFLTEAL True H1975_Epitope_Rep2 1078.51825557326 1078.51767496793 52.118 1 -0.2764951450084787 0.06888162672476399 0.9438714419765777 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B', 'ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 47455 7058 IYIVDRRFRSP True PC9_epitope_Rep4 1420.7939173442398 1420.79227490379 34.411 3 -0.2764991957002303 0.06888162672476399 0.9438714419765777 ['ENSG00000111713|ENST00000261195|GYS2'] 47229 16971 IYDPNLAFLRF True NCI_RA007_Epitope_Rep3 1367.7237720957498 1367.7221249037902 74.619 3 -0.27657508589837193 0.06891668633467075 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2'] 117485 21853 VAEGVLMTSL True PC9_epitope_Rep5 1018.53688284286 1018.53578993586 89.093 2 -0.27659290327706937 0.06892858439530915 0.9438714419765777 ['ENST00000416880.5_1_3:42610473-42623377:-|nuORF'] 101949 15281 SPLSSPLAQA True PC9_epitope_Rep4 969.5131106231698 969.51200993586 66.707 2 -0.2766150341361435 0.06892858439530915 0.9438714419765777 ['ENST00000394540.3_1_11:64010007-64010954:+|nuORF', 'ENST00000541388.1_1_11:64010007-64011498:+|nuORF'] 71940 18947 MPTLPPPSV True PC9_epitope_Rep2 937.49428975489 937.49318993586 78.245 2 -0.27662311550852003 0.06892858439530915 0.9438714419765777 ['nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 116976 20922 TYPNTYIF True PC9_epitope_Rep3 1017.48074786573 1017.47964993586 85.753 2 -0.27663180028123724 0.06892858439530915 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 7941 17886 ATDFGEALV True PC9_epitope_Rep6 921.4443623570098 921.44381496793 81.424 1 -0.2766567345741486 0.06892858439530915 0.9438714419765777 ['nc|ENSG00000128595|O43852-9|CALU', 'nc|ENSG00000128595|O43852-15|CALU', 'nc|ENSG00000128595|O43852-8|CALU', 'nc|ENSG00000128595|O43852-5|CALU', 'nc|ENSG00000128595|O43852-6|CALU', 'nc|ENSG00000128595|O43852-2|CALU', 'ENSG00000128595|ENST00000249364|CALU', 'nc|ENSG00000128595|O43852-4|CALU', 'nc|ENSG00000128595|O43852-3|CALU'] 106517 15012 SVVQGTLGV True PC9_epitope_Rep4 858.4810822188999 858.47998993586 65.681 2 -0.27672338714699396 0.06896238745280278 0.9438714419765777 ['ENSG00000163872|ENST00000305135|YEATS2', 'YEATS2-ATP11B|1|fusion'] 129825 8515 VTLGGTSVTV True PC9_epitope_Rep4 932.5178616504401 932.51676993586 40.228 2 -0.2767645425086088 0.06896238745280278 0.9438714419765777 ['ENSG00000177150|ENST00000651643|FAM210A'] 122508 13391 VGSSAVTTLGD True PC9_epitope_Rep2 1005.49785448185 1005.49674993586 56.789 2 -0.27678912702468855 0.06897928806113743 0.9438714419765777 ['ENST00000527124.1_1_10:5754860-5756196:+|nuORF'] 60824 23841 LKKKKKKKKK True H1975_Epitope_Rep3 1283.94929578683 1283.9476649037902 99.416 3 -0.2768465116687006 0.06902748030638545 0.9438714419765777 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 109719 12974 THFRQETIT True PC9_epitope_Rep5 1131.5672714543498 1131.5661699358602 54.914 2 -0.27687765667826086 0.06902748030638545 0.9438714419765777 ['ENSG00000197016|ENST00000330619|ZNF470'] 45753 9620 ISNEFKVEV True PC9_epitope_Rep6 1063.5549754351498 1063.5538699358601 47.338 2 -0.2769258504760951 0.06902748030638545 0.9438714419765777 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1', 'ENST00000477264.1_1_1:9790568-9793533:-|nuORF'] 107 10616 AAATATFAAA True PC9_epitope_Rep2 864.4341320264798 864.43302993586 46.149 2 -0.2769441142202053 0.06902748030638545 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 133299 20510 WENLYQQTL True PC9_epitope_Rep4 1193.57168812845 1193.57117496793 87.041 1 -0.2769651658113683 0.06902748030638545 0.9438714419765777 ['nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'SCN9A|p.L1226Rfs*18|1|0.19|ENSG00000169432|chr2:166238218-166238218|A/-|frameshift_variant', 'SCN9A|p.D678Vfs*3|1|0.16|ENSG00000169432|chr2:166281750-166281750|T/-|frameshift_variant'] 36218 17680 GVGAVNISV True PC9_epitope_Rep3 814.45486747106 814.45376993586 73.202 2 -0.2770973006200463 0.06907942500363003 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 66072 7002 LSNKHDVVK True NCI_RA007_Epitope_Rep2 1038.5821932425 1038.58108993586 31.857 2 -0.27710243257002193 0.06907942500363003 0.9438714419765777 ['ENSG00000174405|ENST00000442234|LIG4'] 118783 11539 VEEAEDRGP True H1975_Epitope_Rep3 1000.4461532621599 1000.44504993586 49.51 2 -0.2771417284362494 0.06911447084233262 0.9438714419765777 ['chr3:153927317-153979854|138|13.17|0.05|7.92|-|1|TE_info:L1PB1,L1PB1_dup2586,L1,LINE,donor,+,153979854,153983404|LINC02006,None|25'] 96716 9655 SEQESLLQQA True H1975_Epitope_Rep1 1131.54078192299 1131.53968993586 42.068 2 -0.27734577965057167 0.06916766488801772 0.9438714419765777 ['ENSG00000198952|ENST00000361813|SMG5'] 59105 10192 LGEGASLPP True NCI_RA007_Epitope_Rep5 839.4388830537499 839.43833496793 45.836 1 -0.27736325653429517 0.06918455870342474 0.9438714419765777 ['ENST00000313401.3_1_17:30816702-30816975:+|nuORF'] 81304 8599 PPQPPPPPP True PC9_epitope_Rep5 922.4912529797799 922.49014993586 38.018 2 -0.27740521397542156 0.06920145190562614 0.9438714419765777 ['HOXD3|p.Q115K|1|0.11|ENSG00000128652|chr2:176169457-176169457|C/A|missense_variant', 'ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000168066|Q15637-5|SF1', 'MARCHF11|p.R187Dfs*15|1|0.2|ENSG00000183654|chr5:16177860-16177860|G/-|frameshift_variant', 'ENSG00000183654|ENST00000332432|MARCHF11', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'ENSG00000165556|ENST00000381020|CDX2', 'nc|ENSG00000288658|A0A7I2V3R4|RNF228', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000128652|ENST00000683222|HOXD3', 'DGKD-ATG16L1|2|fusion', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 70936 15519 MELQEIQLK True PC9_epitope_Rep4 1130.6005457285798 1130.59944993586 67.619 2 -0.27747273485174023 0.0692170883089543 0.9438714419765777 ['nc|ENSG00000143549|P06753-5|TPM3', 'nc|ENSG00000143549|P06753-2|TPM3', 'nc|ENSG00000143549|P06753-4|TPM3', 'nc|ENSG00000143549|P06753-3|TPM3', 'nc|ENSG00000143549|P06753-6|TPM3', 'ENST00000473036.2_1_1:154145382-154155604:-|nuORF', 'nc|ENSG00000143549|P06753-7|TPM3', 'ENST00000469717.5_1_1:154145382-154155531:-|nuORF', 'ENST00000391998.3_1_19:53982901-53983033:+|nuORF'] 88384 6850 QYNPVKQQL True NCI_RA007_Epitope_Rep5 1116.5927579262 1116.5916699358602 33.033 2 -0.2774752971523775 0.0692170883089543 0.9438714419765777 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 37046 16901 GVSDVDYSL True PC9_epitope_Rep4 953.43419159613 953.43364496793 72.994 1 -0.27751893888137324 0.06930657133005462 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 68114 11021 LTPEQLEAV True H1975_Epitope_Rep1 998.5284263341399 998.5273299358599 47.353 2 -0.2775368398697065 0.06932346109175377 0.9438714419765777 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000534191.1_1_11:828562-829184:+|nuORF', 'ENST00000530737.2_1_11:828562-829423:+|nuORF'] 84815 9325 QHLDPQGAQEL True PC9_epitope_Rep2 1234.59421447818 1234.5931099358602 41.207 2 -0.2775575345998431 0.06934035024045004 0.9438714419765777 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF', 'nc|ENSG00000149262|Q96HW7-3|INTS4', 'ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 42430 7281 IEQELTSKQG True NCI_RA007_Epitope_Rep2 1131.57716743171 1131.57606993586 32.942 2 -0.27757103849161485 0.069352204681546 0.9438714419765777 ['nc|ENSG00000141376|Q9H6U6-6|BCAS3', 'ENSG00000141376|ENST00000407086|BCAS3', 'nc|ENSG00000141376|Q9H6U6|BCAS3', 'nc|ENSG00000141376|Q9H6U6-7|BCAS3', 'nc|ENSG00000141376|Q9H6U6-3|BCAS3', 'nc|ENSG00000141376|Q9H6U6-8|BCAS3'] 104503 7998 SSPSDFSVSLK True NCI_RA007_Epitope_Rep5 1152.56626839484 1152.56516993586 37.455 2 -0.27757798633279335 0.069352204681546 0.9438714419765777 ['ENSG00000071051|ENST00000233154|NCK2'] 346 7296 AAKDAEKIREL True NCI_RA007_Epitope_Rep5 1242.6932002434598 1242.6915449037901 34.741 3 -0.27760422089789644 0.069352204681546 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 79066 21350 PFSLSPSLS True PC9_epitope_Rep5 933.48074786573 933.47964993586 87.181 2 -0.2776163255389005 0.069352204681546 0.9438714419765777 ['ENST00000357375.4_1_19:51914355-51919928:-|nuORF'] 44926 4654 IQEEKENTEQR True NCI_RA007_Epitope_Rep5 1402.6688359704199 1402.66720490379 24.585 3 -0.2776198019128568 0.069352204681546 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'ENST00000526262.5_1_11:70189825-70228249:+|nuORF', 'ENST00000532504.5_1_11:70185286-70228249:+|nuORF'] 124235 14415 VLAVREPLL True PC9_epitope_Rep3 1008.6331661861999 1008.63206993586 60.551 2 -0.2776892092562298 0.06938597764552185 0.9438714419765777 ['ENST00000273308.8_2_12:56709793-56710018:-|nuORF'] 18012 7917 EIIAKQGG True NCI_RA007_Epitope_Rep1 814.45486747106 814.45376993586 34.79 2 -0.2777250773339332 0.06938597764552185 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 4422 12548 AIVDKVSSV True PC9_epitope_Rep3 916.52294703088 916.52184993586 53.287 2 -0.27775933674473374 0.06941471025799194 0.9438714419765777 ['ENSG00000158623|ENST00000425248|COPG2', 'nc|ENSG00000158623|Q9UBF2-2|COPG2'] 130170 7578 VTRSENSI True PC9_epitope_Rep5 904.4614094034799 904.46030993586 34.097 2 -0.27779394418245623 0.06941471025799194 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF'] 75318 6035 NPVHYDLHVK True NCI_RA007_Epitope_Rep4 1220.6302060640799 1220.62855490379 29.831 3 -0.2777986186277331 0.06941471025799194 0.9438714419765777 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 109221 10702 TFTMKKKSW True NCI_RA007_Epitope_Rep1 1155.6110508426298 1155.6094049037902 45.619 3 -0.2778120475783958 0.06941471025799194 0.9438714419765777 ['ENST00000548811.5_1_12:51818730-51834771:+|nuORF', 'ENST00000546497.1_1_12:51818730-51834609:+|nuORF', 'ENST00000535225.6_1_12:51834522-51846003:+|nuORF'] 32331 20247 GGALVHLLDL True PC9_epitope_Rep1 1006.5811306133398 1006.58002993586 82.708 2 -0.2778276866302903 0.06941471025799194 0.9438714419765777 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000460049.6_1_14:24028960-24033376:-|nuORF'] 41978 11385 IEDGERCVRP True PC9_epitope_Rep1 1172.56080617492 1172.5597099358602 48.673 2 -0.2778860359388302 0.06941471025799194 0.9438714419765777 ['nc|ENSG00000164576|Q9HAJ7-2|SAP30L', 'nc|ENSG00000164576|Q9HAJ7-3|SAP30L', 'ENSG00000164576|ENST00000297109|SAP30L', 'ENST00000523198.5_1_5:153826164-153832030:+|nuORF'] 106277 4803 SVQRRSPEAL True NCI_RA007_Epitope_Rep3 1141.6203696563698 1141.61872490379 25.859 3 -0.2779057357127734 0.06944847605224963 0.9438714419765777 ['ENST00000571306.1_1_17:1057467-1057878:-|nuORF'] 63478 11271 LPHGFTNMA True PC9_epitope_Rep6 986.4643866089401 986.46328993586 54.367 2 -0.27792886552170615 0.06944847605224963 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 76558 17980 NTDRSWLI True PC9_epitope_Rep4 1003.5086939490699 1003.50758993586 77.215 2 -0.27794454655534234 0.06946535803051468 0.9438714419765777 ['ENSG00000118997|ENST00000312428|DNAH7', 'DNAH7|p.D2288Efs*7|1|0.18|ENSG00000118997|chr2:195864791-195864791|A/-|frameshift_variant'] 31029 6494 GAVIRTVSG True H1975_Epitope_Rep2 858.49231560894 858.49120993586 29.896 2 -0.2779681241702706 0.06947467711507764 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000413293.1_1_22:22663100-22664193:+|nuORF'] 63332 9581 LPEAFLCRSR True PC9_epitope_Rep2 1190.62301250866 1190.62190993586 42.197 2 -0.27806980902205564 0.06947467711507764 0.9438714419765777 ['ENST00000408957.4_1_2:233414953-233415175:-|nuORF'] 99468 10466 SLELQDLAT True H1975_Epitope_Rep2 988.50769088956 988.50658993586 45.275 2 -0.2781176536192278 0.06947467711507764 0.9438714419765777 ['ENST00000305366.7_1_3:149093296-149093356:-|nuORF'] 15576 11945 EATEWIQDP True H1975_Epitope_Rep2 1087.48220441771 1087.48110993586 51.025 2 -0.27812431894015804 0.06947467711507764 0.9438714419765777 ['ENSG00000134256|ENST00000682167|CD101'] 79879 13539 PILENPEILRK True NCI_RA007_Epitope_Rep2 1320.7765359445996 1320.77542993586 57.306 2 -0.27815629991859453 0.06947467711507764 0.9438714419765777 ['ENSG00000134480|ENST00000256897|CCNH'] 98273 21702 SIFEVAFLLI True PC9_epitope_Rep1 1150.66379760814 1150.6627099358602 88.307 2 -0.27816463640563827 0.06947467711507764 0.9438714419765777 ['ENSG00000152661|ENST00000282561|GJA1'] 21682 16864 ERWKEERDRKL True PC9_epitope_Rep2 1543.8219229972299 1543.8202649037903 70.115 3 -0.27817849035803804 0.06947467711507764 0.9438714419765777 ['ENSG00000180357|ENST00000326648|ZNF609'] 76425 16850 NSVAQTALLAE True PC9_epitope_Rep3 1115.5822528121498 1115.5811499358601 69.966 2 -0.27839799118744213 0.06950969544160061 0.9438714419765777 ['ENSG00000237988|ENST00000641137|OR2I1P', 'nc|ENSG00000237988|Q8NGU4|OR2I1P'] 83946 8050 QELARVRQREK True NCI_RA007_Epitope_Rep2 1411.8007936298297 1411.79914490379 35.944 3 -0.2785353592296972 0.0695253124376485 0.9438714419765777 ['ENSG00000143847|ENST00000295706|PPFIA4'] 47709 15397 IYPWVHVVI True NCI_RA007_Epitope_Rep3 1124.6382515666398 1124.6371499358602 68.119 2 -0.2785363447438688 0.0695253124376485 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3'] 61871 6799 LLLEQGKA True H1975_Epitope_Rep3 870.5174677276199 870.51636993586 31.105 2 -0.2785832344512114 0.06955528148578062 0.9438714419765777 ['ENSG00000171827|ENST00000330173|ZNF570'] 47014 4791 IVQYPGSNAGP True H1975_Epitope_Rep3 1101.5454733806098 1101.54436993586 23.555 2 -0.27861091996627646 0.06955528148578062 0.9438714419765777 ['ENSG00000204296|ENST00000533191|TSBP1', 'nc|ENSG00000204296|Q5SRN2|TSBP1'] 16736 14220 EEYEYMNRRRR True PC9_epitope_Rep1 1600.75285746124 1600.75120490379 59.521 3 -0.278614029310706 0.06955528148578062 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 14256 4285 DSYVGDEAQSK True NCI_RA007_Epitope_Rep5 1197.51496109797 1197.5138699358602 23.062 2 -0.2786188526192124 0.06955528148578062 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 78053 5482 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 27.84 2 -0.27862255258047236 0.06955528148578062 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 30863 4330 GARAQLREATT True NCI_RA007_Epitope_Rep4 1172.6261833127996 1172.6245349037902 23.0 3 -0.27866287739219503 0.06957215662803562 0.9438714419765777 ['nc|ENSG00000186994|Q6NY19-1|KANK3', 'ENSG00000186994|ENST00000330915|KANK3', 'ENST00000593331.1_1_19:8399202-8399642:-|nuORF'] 45286 4690 ISAGGYIK True NCI_RA007_Epitope_Rep5 807.44905381463 807.44794993586 24.727 2 -0.2787777850274195 0.06958903115818492 0.9438714419765777 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 16067 10708 EECPPTSPSP True PC9_epitope_Rep1 1042.4277263167 1042.42662993586 46.077 2 -0.2787855598498965 0.06960464272760247 0.9438714419765777 ['ENST00000582168.5_1_17:72769619-72771837:-|nuORF', 'ENST00000582993.5_1_17:72769619-72771837:-|nuORF', 'ENST00000582118.1_1_17:72769619-72771837:-|nuORF'] 30171 23397 FYTEWWREKRM True NCI_RA007_Epitope_Rep3 1630.7714676474995 1630.7703699358601 101.58 2 -0.27879105801996495 0.06960464272760247 0.9438714419765777 ['ENST00000292599.3_1_5:179203171-179203312:+|nuORF'] 25551 7431 FERLTLKHD True NCI_RA007_Epitope_Rep3 1157.61930702721 1157.61766490379 36.354 3 -0.27891747819556273 0.06962151575053045 0.9438714419765777 ['ENSG00000087086|ENST00000331825|FTL'] 57115 8464 LEENQVKK True H1975_Epitope_Rep3 986.5396597241798 986.53856993586 37.541 2 -0.2789363534792704 0.06963586246917162 0.9438714419765777 ['ENSG00000072501|ENST00000322213|SMC1A'] 71450 19212 MITEASFYL True NCI_RA007_Epitope_Rep1 1073.51033374185 1073.5097749679298 78.88 1 -0.2789391754173515 0.06963586246917162 0.9438714419765777 ['ENSG00000137975|ENST00000370565|CLCA2'] 86305 12484 QQGPVGVNV True PC9_epitope_Rep1 896.4715801643599 896.4710349679301 52.888 1 -0.27894999931079173 0.06963586246917162 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 129203 7888 VTDKEQEFAAR True H1975_Epitope_Rep3 1292.63607929016 1292.6349899358602 35.317 2 -0.2789804205754709 0.06965273370205821 0.9438714419765777 ['EPB41L3|p.P944Tfs*4|1|0.25|ENSG00000082397|chr18:5397069-5397070|-/T|frameshift_variant', 'ENSG00000082397|ENST00000341928|EPB41L3', 'EPB41L3|p.Q174Tfs*12|1|0.22|ENSG00000082397|chr18:5443847-5443848|-/T|frameshift_variant', 'EPB41L3|p.L585Cfs*16|1|0.26|ENSG00000082397|chr18:5416132-5416132|G/-|frameshift_variant', 'nc|ENSG00000082397|Q9Y2J2-3|EPB41L3', 'nc|ENSG00000082397|Q9Y2J2-2|EPB41L3', 'nc|ENSG00000082397|Q9Y2J2-4|EPB41L3'] 98335 6668 SIGNAQKVP True H1975_Epitope_Rep3 912.5028802926399 912.50178993586 30.603 2 -0.27903803225630125 0.06966834097956372 0.9438714419765777 ['ENST00000504327.1_1_3:98501668-98501887:+|nuORF'] 100293 7660 SLLTSTVP True H1975_Epitope_Rep2 816.45928414516 816.45818993586 34.419 2 -0.2790793125703487 0.06966834097956372 0.9438714419765777 ['ENST00000252445.7_1_19:11663878-11664130:-|nuORF'] 20368 16087 EPIPQKPQSAF True PC9_epitope_Rep5 1240.6451874218799 1240.6435349037902 66.867 3 -0.27916406600882787 0.06970334372960035 0.9438714419765777 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'ENST00000443361.1_1_9:108287470-108288637:+|nuORF'] 22913 18002 EVFREKNVP True PC9_epitope_Rep1 1116.5927579262 1116.5916699358602 74.038 2 -0.27925306931095495 0.06973455178416015 0.9438714419765777 ['ENSG00000122965|ENST00000261741|RBM19'] 109442 16551 TGSFYQSL True PC9_epitope_Rep1 901.4181476091699 901.41704993586 68.486 2 -0.2792994556646843 0.06973455178416015 0.9438714419765777 ['ENST00000584706.1_1_18:678488-685971:-|nuORF'] 140235 16968 YWMHVQNTF True PC9_epitope_Rep6 1224.53861417836 1224.53750993586 77.813 2 -0.2793392603146172 0.06973455178416015 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 30712 20096 GALSQLPL True PC9_epitope_Rep3 797.4647038787699 797.4641549679301 82.551 1 -0.2793755807063949 0.06973455178416015 0.9438714419765777 ['ENSG00000260220|ENST00000638797|CCDC187'] 87623 11662 QTVAVGVIKA True PC9_epitope_Rep5 984.5967806774798 984.59568993586 49.853 2 -0.2795767184757805 0.06974762491841323 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000513637.1_1_5:43495177-43495438:-|nuORF', 'ENST00000417549.1_1_13:28789725-28790031:+|nuORF'] 48343 13715 KDWGKMVSL True PC9_epitope_Rep1 1062.55320161334 1062.55210993586 57.604 2 -0.2796334910767468 0.06974762491841323 0.9438714419765777 ['OR2B3|p.Y278C|1|0.13|ENSG00000204703|chr6:29086416-29086416|T/C|missense_variant', 'ENSG00000204703|ENST00000377173|OR2B3'] 98541 16847 SILPREEAP True PC9_epitope_Rep3 1010.5396597241798 1010.53856993586 69.954 2 -0.27967335431666074 0.06974762491841323 0.9438714419765777 ['ENST00000216133.9_1_22:39529304-39529448:-|nuORF'] 57557 10197 LELDDAIR True PC9_epitope_Rep1 943.49746055903 943.49636993586 44.101 2 -0.2797103099307297 0.06974762491841323 0.9438714419765777 ['ENSG00000124237|ENST00000371168|C20orf85'] 55708 7044 LDDGNGGQF True NCI_RA007_Epitope_Rep5 921.38282472961 921.38172993586 33.773 2 -0.27983151503772774 0.06979948511548642 0.9438714419765777 ['nc|ENSG00000100505|Q9C026-5|TRIM9', 'nc|ENSG00000100505|Q9C026|TRIM9', 'ENSG00000100505|ENST00000684578|TRIM9', 'nc|ENSG00000100505|Q9C026-4|TRIM9'] 137645 18600 YLYARLRGVP True PC9_epitope_Rep1 1206.6873270173799 1206.6862299358602 76.332 2 -0.2798389150182683 0.06979948511548642 0.9438714419765777 ['ENSG00000198691|ENST00000370225|ABCA4'] 121196 18846 VGGLTLEVIL True PC9_epitope_Rep5 1012.6168474157199 1012.61574993586 77.508 2 -0.2798902051617668 0.06981634909987491 0.9438714419765777 ['ENST00000378119.8_1_6:24720133-24720250:-|nuORF'] 137108 15195 YLDDPTNSWY True H1975_Epitope_Rep1 1272.52988288612 1272.52878993586 63.711 2 -0.2799630158175169 0.06983321247280638 0.9438714419765777 ['ENSG00000064195|ENST00000434704|DLX3'] 108295 7169 TEDAPRPPVP True H1975_Epitope_Rep3 1077.5454733806098 1077.54436993586 32.55 2 -0.279987830609731 0.0698500752343141 0.9438714419765777 ['ENSG00000103126|ENST00000262320|AXIN1', 'nc|ENSG00000103126|O15169-2|AXIN1', 'AXIN1|p.G265Efs*149|1|0.54|ENSG00000103126|chr16:346232-346232|C/-|frameshift_variant'] 42484 12281 IERDGYAQI True PC9_epitope_Rep1 1063.5298233164697 1063.5287299358602 52.094 2 -0.28009786935653846 0.06986693738443131 0.9438714419765777 ['ENSG00000100412|ENST00000216254|ACO2'] 68421 19487 LTTILKAWDF True PC9_epitope_Rep2 1206.6648602373 1206.66376993586 80.339 2 -0.2802076447929014 0.0699525069789363 0.9438714419765777 ['ENST00000569461.1_1_16:81045544-81053727:+|nuORF', 'nc|ENSG00000166451|Q96H22-2|CENPN', 'CENPN|p.L222Tfs*18|1|0.12|ENSG00000166451|chr16:81024743-81024744|CT/-|frameshift_variant', 'nc|ENSG00000166451|Q96H22-5|CENPN', 'nc|ENSG00000166451|Q96H22-4|CENPN', 'ENSG00000166451|ENST00000305850|CENPN', 'nc|ENSG00000166451|Q96H22-3|CENPN'] 41708 15946 IDLRTNVL True PC9_epitope_Rep3 942.5498304850599 942.54872993586 66.482 2 -0.2802100788108293 0.0699525069789363 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 61712 13677 LLIHRKNLNYL True PC9_epitope_Rep6 1395.83505388023 1395.83341490379 64.394 3 -0.28021560620678054 0.0699525069789363 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 95789 4609 SDDGVDLKTQP True NCI_RA007_Epitope_Rep3 1173.55134660669 1173.5502499358602 25.044 2 -0.280259094107937 0.0699525069789363 0.9438714419765777 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN'] 20397 16945 EPLRGYIL True PC9_epitope_Rep5 959.54401682863 959.54290993586 70.197 2 -0.28032550654975547 0.06998622389791183 0.9438714419765777 ['nc|ENSG00000074803|Q13621-3|SLC12A1', 'ENSG00000074803|ENST00000380993|SLC12A1', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2'] 33502 21469 GLGVGLLYL True PC9_epitope_Rep4 903.5429541994699 903.54184993586 90.77 2 -0.28035157435422536 0.06998622389791183 0.9438714419765777 ['ENSG00000179846|ENST00000686631|NKPD1', 'nc|ENSG00000179846|Q17RQ9|NKPD1'] 71979 13690 MPYSGMTGA True PC9_epitope_Rep1 913.36737498961 913.36682496793 57.511 1 -0.28042806451081986 0.07002120756221791 0.9438714419765777 ['ENSG00000111816|ENST00000606080|FRK', 'nc|ENSG00000111816|P42685-2|FRK'] 110932 11146 TLATRRSL True NCI_RA007_Epitope_Rep4 916.54541381096 916.54430993586 49.747 2 -0.2805698604790174 0.07005365040237801 0.9438714419765777 ['ENST00000500537.2_1_11:112831441-112833979:-|nuORF'] 5985 14880 APLAIPSAAA True PC9_epitope_Rep6 880.50181766348 880.50072993586 69.219 2 -0.2806531094332442 0.07005365040237801 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:806325-806721:+|nuORF'] 12830 18879 DLKNFYTYI True PC9_epitope_Rep3 1175.5862755634298 1175.5851699358602 77.842 2 -0.2806624431554899 0.07005365040237801 0.9438714419765777 ['ENST00000497714.1_1_10:98825376-98861127:-|nuORF'] 1771 4342 AEHKHFQTMLK True NCI_RA007_Epitope_Rep2 1368.6972400780799 1368.6955949037902 21.526 3 -0.28077194809474926 0.07006669566478178 0.9438714419765777 ['ENST00000482518.6_1_2:229715274-230109633:-|nuORF'] 28476 4901 FSESKHTEP True H1975_Epitope_Rep2 1060.48253877088 1060.4814499358602 23.935 2 -0.280784004215764 0.07006669566478178 0.9438714419765777 ['ENSG00000183354|ENST00000399933|KIAA2026', 'ENST00000540714.1_1_9:5919686-5933837:-|nuORF'] 106515 15718 SVVQGTLGV True PC9_epitope_Rep2 858.4810822188999 858.47998993586 65.734 2 -0.28079468938816776 0.07006669566478178 0.9438714419765777 ['ENSG00000163872|ENST00000305135|YEATS2', 'YEATS2-ATP11B|1|fusion'] 136295 10141 YGSSVSYLGVP True NCI_RA007_Epitope_Rep1 1127.54989005471 1127.5487899358602 43.457 2 -0.28082600216440906 0.07006669566478178 0.9438714419765777 ['nc|ENSG00000293543|Q6B8I1|DUSP13A', 'nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 57243 18298 LEFLGSNNL True PC9_epitope_Rep2 1005.5131106231701 1005.51200993586 75.707 2 -0.2809143520035038 0.07008354930496402 0.9438714419765777 ['ENST00000468586.5_1_1:62149195-62160394:-|nuORF', 'ENST00000488410.5_1_1:62149195-62160440:-|nuORF'] 33361 13354 GLEKQVLGL True PC9_epitope_Rep3 955.5702315764698 955.56912993586 56.4 2 -0.2809771877835986 0.07015350042588665 0.9438714419765777 ['WHSC1L1-C15orf55|1|fusion', 'nc|ENSG00000184507|Q86Y26|NUTM1', 'nc|ENSG00000184507|Q86Y26-3|NUTM1', 'ENSG00000184507|ENST00000537011|NUTM1'] 116218 7353 TVTSRQSEI True PC9_epitope_Rep6 1019.52473793603 1019.52364993586 37.46 2 -0.2809949237613747 0.07015350042588665 0.9438714419765777 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1', 'BAIAP2L1|p.E165G|1|0.47|ENSG00000006453|chr7:98315605-98315605|T/C|missense_variant'] 19454 12152 ELPSSQNVSPA True NCI_RA007_Epitope_Rep2 1127.54586730343 1127.5447699358601 51.862 2 -0.28106543461509487 0.07018338648883735 0.9438714419765777 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 103973 24267 SRRHRRRWLEN True PC9_epitope_Rep4 1564.8559575205197 1564.85486993586 101.82 2 -0.2810753756696203 0.07018338648883735 0.9438714419765777 ['ENST00000263864.9_1_2:85808699-85808759:+|nuORF'] 33857 16749 GLVLSLEEQL True PC9_epitope_Rep6 1099.61249031127 1099.6113899358602 76.916 2 -0.2811016812365439 0.07018338648883735 0.9438714419765777 ['ENSG00000116830|ENST00000369466|TTF2'] 12326 20953 DITYFIQQL True H1975_Epitope_Rep1 1139.58627556343 1139.5851699358602 87.042 2 -0.28120507975989184 0.07018338648883735 0.9438714419765777 ['ENSG00000106526|ENST00000683684|ACTR3C', 'ENST00000415792.5_1_2:114670765-114697700:+|nuORF', 'nc|ENSG00000133627|Q9P1U1-3|ACTR3B', 'ENSG00000115091|ENST00000263238|ACTR3', 'nc|ENSG00000133627|Q9P1U1-2|ACTR3B', 'ENSG00000133627|ENST00000256001|ACTR3B'] 31388 5116 GEASPPAPP True NCI_RA007_Epitope_Rep3 821.3919328613299 821.39082993586 27.115 2 -0.2812352926945505 0.07018338648883735 0.9438714419765777 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 55137 18354 LAMLVGCYV True PC9_epitope_Rep4 967.4870961994699 967.48598993586 78.665 2 -0.2813138847958472 0.07023520458087196 0.9438714419765777 ['nc|ENSG00000029364|Q9NUM3-3|SLC39A9', 'nc|ENSG00000029364|Q9NUM3-2|SLC39A9', 'ENSG00000029364|ENST00000336643|SLC39A9', 'ENST00000554059.1_1_14:69866086-69895394:+|nuORF'] 135014 10149 YAGSGNVL True PC9_epitope_Rep4 779.38136817763 779.38026993586 46.715 2 -0.281340238213215 0.07023520458087196 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 122424 7769 VGSKDYVLS True PC9_epitope_Rep2 966.5022115863 966.50110993586 35.257 2 -0.2814492699864223 0.07028319834755667 0.9438714419765777 ['SEMA3F-RBM6|1|fusion', 'SEMA3F-RBM6|4|fusion', 'SEMA3F-RBM6|3|fusion', 'SEMA3F-RBM6|2|fusion', 'nc|ENSG00000001617|Q13275-2|SEMA3F', 'ENSG00000001617|ENST00000002829|SEMA3F'] 80706 13548 PLQDSPLL True NCI_RA007_Epitope_Rep5 881.4858332461699 881.48472993586 58.799 2 -0.2814674931903681 0.07028319834755667 0.9438714419765777 ['nc|ENSG00000183248|Q9H6K5-2|PRR36', 'ENSG00000183248|ENST00000618550|PRR36'] 62170 13153 LLPHVVPGTT True PC9_epitope_Rep4 1032.59678067748 1032.59568993586 58.489 2 -0.28148488009826617 0.07028319834755667 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 83614 5740 QDVETGTQLEK True NCI_RA007_Epitope_Rep1 1246.60411045554 1246.6030099358602 26.384 2 -0.28154709018141827 0.07028319834755667 0.9438714419765777 ['ENSG00000197157|ENST00000354725|SND1'] 125397 13150 VLTEEKGSVI True PC9_epitope_Rep2 1073.5968402471299 1073.59574993586 55.852 2 -0.28155801259994195 0.07028319834755667 0.9438714419765777 ['ENSG00000204290|ENST00000454136|BTNL2', 'nc|ENSG00000204290|Q9UIR0-1|BTNL2'] 60709 17705 LIYNSELIL True PC9_epitope_Rep4 1076.61176203528 1076.6106699358602 76.126 2 -0.2816923812142373 0.07030004348456298 0.9438714419765777 ['ENST00000541225.5_1_17:66883094-66937097:-|nuORF'] 69436 11387 LVRNPVLQ True PC9_epitope_Rep5 937.5709002828098 937.56980993586 48.798 2 -0.2817723816367925 0.07033500625079267 0.9438714419765777 ['nc|ENSG00000103855|Q5ZPR3-3|CD276', 'nc|ENSG00000103855|Q5ZPR3-4|CD276', 'ENSG00000103855|ENST00000318443|CD276', 'CD276|p.A449V|1|0.26|ENSG00000103855|chr15:73704449-73704449|C/T|missense_variant', 'ENST00000557951.1_1_15:73996325-74000993:+|nuORF', 'nc|ENSG00000103855|Q5ZPR3-2|CD276'] 44654 20814 IPLGFGVAA True PC9_epitope_Rep2 843.4854393233499 843.48434993586 85.502 2 -0.2818066979183234 0.07035184983875059 0.9438714419765777 ['ENSG00000132603|ENST00000254940|NIP7', 'ENST00000485801.1_1_3:132120486-132120636:+|nuORF'] 118129 8674 VAVDQQPVT True NCI_RA007_Epitope_Rep3 955.4974605590298 955.49636993586 41.2 2 -0.28188123261646936 0.07038681039949271 0.9438714419765777 ['nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 45538 19984 ISFTEFVKV True PC9_epitope_Rep4 1068.58554728744 1068.5844499358602 85.001 2 -0.28191105782857556 0.07041921808761187 0.9438714419765777 ['ENSG00000187446|ENST00000334660|CHP1', 'ENST00000558351.5_1_15:41556426-41571584:+|nuORF'] 66666 5647 LSSSYGREKER True NCI_RA007_Epitope_Rep2 1310.6578773638998 1310.6562449037901 26.58 3 -0.28191938340038286 0.07041921808761187 0.9438714419765777 ['ENST00000454175.1_1_7:99103050-99103296:+|nuORF'] 136602 6684 YHYYSRMANYR True NCI_RA007_Epitope_Rep2 1522.67756726266 1522.67593490379 30.611 3 -0.28193308178707704 0.07041921808761187 0.9438714419765777 ['AGAP1-DIS3L2|1|fusion', 'AGAP1|p.A337Gfs*13|1|0.1|ENSG00000157985|chr2:235807289-235807290|-/G|frameshift_variant', 'nc|ENSG00000157985|Q9UPQ3-3|AGAP1', 'nc|ENSG00000157985|Q9UPQ3-2|AGAP1', 'ENSG00000157985|ENST00000304032|AGAP1', 'AGAP1|p.K197Nfs*6|1|0.26|ENSG00000157985|chr2:235750406-235750406|G/-|frameshift_variant'] 22861 8277 EVEQERRLSEA True H1975_Epitope_Rep2 1344.66335666716 1344.66224993586 36.788 2 -0.28194867272484375 0.0704322307162784 0.9438714419765777 ['nc|ENSG00000197948|Q86WN1-3|FCHSD1', 'nc|ENSG00000197948|Q86WN1-2|FCHSD1', 'ENSG00000197948|ENST00000435817|FCHSD1'] 76557 18682 NTDRSWLI True PC9_epitope_Rep2 1003.5086939490699 1003.50758993586 77.228 2 -0.2819820792035079 0.0704322307162784 0.9438714419765777 ['ENSG00000118997|ENST00000312428|DNAH7', 'DNAH7|p.D2288Efs*7|1|0.18|ENSG00000118997|chr2:195864791-195864791|A/-|frameshift_variant'] 3706 14594 AGSFLQDQF True PC9_epitope_Rep3 1011.4661604307499 1011.46506993586 61.264 2 -0.28199888772397586 0.0704322307162784 0.9438714419765777 ['nc|ENSG00000136535|Q16650-2|TBR1', 'ENSG00000136535|ENST00000389554|TBR1'] 86377 17668 QQLGTAVEL True PC9_epitope_Rep1 957.5131106231698 957.5125649679301 72.754 1 -0.2820953622713376 0.0704322307162784 0.9438714419765777 ['ENSG00000138594|ENST00000308580|TMOD3'] 77812 17367 PAEPAFLA True PC9_epitope_Rep6 814.4225047136199 814.4219549679301 79.417 1 -0.28218784961466725 0.07044779363814216 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 63944 18817 LPYHVLLL True PC9_epitope_Rep2 966.59023874506 966.58914993586 77.75 2 -0.28220977439393136 0.07044779363814216 0.9438714419765777 ['ENSG00000119714|ENST00000650645|GPR68'] 80355 19810 PLGITTVLT True PC9_epitope_Rep6 913.5484335027301 913.54788496793 88.857 1 -0.28222937511313706 0.07046463182682729 0.9438714419765777 ['nc|ENSG00000146276|P24046-2|GABRR1', 'ENSG00000146276|ENST00000454853|GABRR1', 'chr6:89180488-89181905|389|10.33|0.27|5.27|-|2|GABRR1,GABRR1|1', 'nc|ENSG00000146276|P24046-3|GABRR1'] 1034 10471 AEAGPLASVPA True H1975_Epitope_Rep1 981.51311062317 981.5125649679301 45.233 1 -0.28226494606090907 0.0704814694054994 0.9438714419765777 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 42270 18874 IEIEINQTLEI True H1975_Epitope_Rep1 1313.70784724809 1313.7067499358602 78.703 2 -0.2822704855706993 0.07049702941602666 0.9438714419765777 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96', 'CD96|p.P408Lfs*10|1|0.26|ENSG00000153283|chr3:111606786-111606786|C/-|frameshift_variant'] 87206 13059 QSLYPLLKDP True H1975_Epitope_Rep2 1172.6441247927198 1172.64302993586 55.354 2 -0.2822884377005535 0.07049702941602666 0.9438714419765777 ['ENSG00000140835|ENST00000539698|CHST4'] 75552 14260 NQLQQWVNLRR True H1975_Epitope_Rep1 1453.79022894613 1453.78912993586 60.035 2 -0.28234636091878923 0.07051386549294499 0.9438714419765777 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 123774 12171 VISPHGIASV True PC9_epitope_Rep3 978.5498304850599 978.54872993586 51.853 2 -0.28239820563647244 0.07052942348445056 0.9438714419765777 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000489065.1_1_2:224866320-224903835:-|nuORF'] 81326 5591 PPRPPPPPP True PC9_epitope_Rep1 950.5337864980999 950.53268993586 26.334 2 -0.28240731023707866 0.07052942348445056 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 28423 5465 FSEDVLSK True NCI_RA007_Epitope_Rep5 923.4600124211499 923.45890993586 27.708 2 -0.28257272338349626 0.07063298016843249 0.9438714419765777 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.F1306Ifs*2|1|0.33|ENSG00000188906|chr12:40305920-40305932|AACTTTGATTTTA/-|frameshift_variant'] 81124 4575 PPHPPPPPP True NCI_RA007_Epitope_Rep4 931.49158733295 931.49048993586 24.003 2 -0.2825978853275757 0.07063298016843249 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 125446 4931 VLTSVEQK True PC9_epitope_Rep3 902.50729696674 902.50618993586 24.062 2 -0.28267295049008756 0.07063298016843249 0.9438714419765777 ['ENST00000302764.8_1_5:162880914-162881052:-|nuORF'] 116318 8068 TVWNNWFYRRF True NCI_RA007_Epitope_Rep1 1587.77351625283 1587.7718849037901 35.381 3 -0.2826825501269908 0.07063298016843249 0.9438714419765777 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 32061 7628 GEVTKIMSP True NCI_RA007_Epitope_Rep4 960.4950180308799 960.49392993586 35.994 2 -0.28271236484986506 0.07064981164879745 0.9438714419765777 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 41904 6860 IDYVPYDDP True H1975_Epitope_Rep1 1095.4760564081098 1095.4749499358602 31.431 2 -0.2827787855804262 0.07073652184936344 0.9438714419765777 ['ENSG00000198734|ENST00000367797|F5'] 46367 7346 ITHQQAISI True PC9_epitope_Rep1 1009.5556441414899 1009.55454993586 33.068 2 -0.2827828083961858 0.07073652184936344 0.9438714419765777 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'MPDZ|p.S1510Efs*25|1|0.23|ENSG00000107186|chr9:13126713-13126714|-/A|frameshift_variant'] 136081 15172 YGAQASMGL True PC9_epitope_Rep1 896.40620302648 896.4056549679301 63.18 1 -0.28278305125502295 0.07073652184936344 0.9438714419765777 ['ENSG00000239306|ENST00000310137|RBM14'] 8736 6938 AVDRLCLGI True NCI_RA007_Epitope_Rep3 958.5269868654999 958.52588993586 34.398 2 -0.28280453972299296 0.07075206895927275 0.9438714419765777 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 22925 18906 EVGFWFFVP True PC9_epitope_Rep1 1126.5487678558998 1126.54766993586 77.507 2 -0.28283433499473837 0.07075206895927275 0.9438714419765777 ['ENST00000371933.7_1_1:47143286-47143442:-|nuORF'] 61921 14357 LLLLLLLLL True NCI_RA007_Epitope_Rep5 1035.7671404778698 1035.76604993586 61.909 2 -0.2829570353361156 0.07078572333991272 0.9438714419765777 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-4|SHBG', 'nc|ENSG00000129214|P04278-3|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000129214|P04278-5|SHBG', 'ENSG00000129214|ENST00000380450|SHBG', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000125810|ENST00000246006|CD93', 'ENSG00000109758|ENST00000382774|HGFAC', 'SHBG|p.L175Afs*39|1|0.14|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'CD93|p.E121Rfs*79|1|0.71|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000182578|ENST00000675795|CSF1R', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000162337|ENST00000294304|LRP5', 'ENSG00000164897|ENST00000297533|TMUB1', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1'] 123434 12232 VIEGCEIK True NCI_RA007_Epitope_Rep5 889.45790424617 889.45680993586 53.701 2 -0.2829727301612978 0.07078572333991272 0.9438714419765777 ['ENSG00000162944|ENST00000295049|RFTN2', 'ENST00000494346.1_1_2:198436734-198482697:-|nuORF'] 10501 12681 CNNRGVCLDQY True H1975_Epitope_Rep2 1283.5386908313499 1283.53758993586 53.878 2 -0.28310155595167846 0.07089180624717066 0.9438714419765777 ['ENSG00000136011|ENST00000388887|STAB2'] 20634 15200 EQFHQFLEA True PC9_epitope_Rep4 1147.52982331647 1147.5287299358602 66.39 2 -0.28310307046817124 0.07089180624717066 0.9438714419765777 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-3|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF'] 32379 13644 GGETLDQVKMR True PC9_epitope_Rep2 1232.6183210510399 1232.61722993586 57.773 2 -0.28314658030845297 0.07092673740629414 0.9438714419765777 ['ENSG00000078237|ENST00000179259|TIGAR'] 100471 8065 SLPHSATVTL True NCI_RA007_Epitope_Rep3 1024.5553097883198 1024.5542099358602 38.809 2 -0.28316812831870125 0.07096038241471717 0.9438714419765777 ['nc|ENSG00000054611|Q8WUA7-3|TBC1D22A', 'nc|ENSG00000054611|Q8WUA7-4|TBC1D22A', 'ENSG00000054611|ENST00000337137|TBC1D22A'] 102233 7751 SPSSTTLTSA True PC9_epitope_Rep5 950.4556553167 950.45454993586 34.756 2 -0.2831799377853099 0.07096038241471717 0.9438714419765777 ['ENST00000489678.1_1_14:74762662-74763162:-|nuORF'] 129390 7714 VTEGSFVYK True H1975_Epitope_Rep3 1028.5178616504397 1028.51676993586 34.655 2 -0.2832501768036551 0.07099531043473538 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2'] 18026 15347 EIIDRMPVI True NCI_RA007_Epitope_Rep1 1084.59506642532 1084.59396993586 63.774 2 -0.2833392597114188 0.07103023718993301 0.9438714419765777 ['LRRCC1|p.K405Nfs*4|2|0.32|ENSG00000133739|chr8:85124882-85124883|GC/-|frameshift_variant', 'LRRCC1|p.P406Afs*4|2|0.21|ENSG00000133739|chr8:85124877-85124878|-/A|frameshift_variant', 'ENSG00000133739|ENST00000360375|LRRCC1', 'nc|ENSG00000133739|Q9C099-2|LRRCC1'] 36331 19376 GVGWTLLL True H1975_Epitope_Rep1 857.5010893874899 857.5005449679301 80.711 1 -0.2833888922986466 0.07107812075676655 0.9438714419765777 ['ENST00000577830.5_2_17:55938859-55939276:-|nuORF'] 39726 7288 HPVLMSEA True PC9_epitope_Rep4 882.4269384710601 882.42584993586 35.348 2 -0.28340602324202724 0.07107812075676655 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 37183 16195 GVTSQVLGV True PC9_epitope_Rep1 858.4810822188999 858.47998993586 67.111 2 -0.28341015527225943 0.07107812075676655 0.9438714419765777 ['nc|ENSG00000140995|Q6ZN54|DEF8'] 116982 15555 TYPPSGPTVFP True H1975_Epitope_Rep2 1161.57062549929 1161.5695299358601 64.988 2 -0.283430898949134 0.07107812075676655 0.9438714419765777 ['nc|ENSG00000104763|Q13510-3|ASAH1'] 9822 15795 AYLKAIVLF True NCI_RA007_Epitope_Rep5 1036.6321035570397 1036.6310099358602 67.476 2 -0.283442233898214 0.07107812075676655 0.9438714419765777 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 134229 19987 WRRKEMKKFWK True H1975_Epitope_Rep1 1621.9027566005695 1621.9016499358602 83.188 2 -0.2835685389916655 0.07113114635382721 0.9438714419765777 ['ENSG00000138600|ENST00000261854|SPPL2A'] 105688 9629 SVGREVCI True PC9_epitope_Rep3 861.4378375079299 861.43674993586 41.988 2 -0.28368266079683324 0.07118288134979543 0.9438714419765777 ['ENST00000251691.4_1_6:138483291-138531090:+|nuORF'] 54018 12307 KYLLAMVL True NCI_RA007_Epitope_Rep4 949.5670607723299 949.56596993586 54.333 2 -0.2837049918116011 0.07118288134979543 0.9438714419765777 ['chr11:65172001-65172246|138|12.34|0.43|4.84|+|0|SPDYC,SPDYC|1', 'SPDYC|p.A99Pfs*32|1|0.18|ENSG00000204710|chr11:65172278-65172279|GC/-|frameshift_variant', 'ENSG00000204710|ENST00000377185|SPDYC'] 67637 14336 LTFAAFNLTV True PC9_epitope_Rep6 1095.5964463243101 1095.5953499358602 67.042 2 -0.28385672556790653 0.07121522057891783 0.9438714419765777 ['ENSG00000130943|ENST00000253255|PKDREJ'] 19070 9389 ELHEEVTLP True NCI_RA007_Epitope_Rep4 1065.5342399905699 1065.5331499358601 42.968 2 -0.2838948152858143 0.07121522057891783 0.9438714419765777 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1', 'ENST00000466164.5_1_16:67859786-67861893:+|nuORF', 'ENST00000568990.5_1_16:67859786-67861893:+|nuORF'] 1649 12611 AEGDFIVA True H1975_Epitope_Rep3 820.3966838885999 820.39613496793 53.713 1 -0.28392864622527175 0.07121522057891783 0.9438714419765777 ['SLCO6A1|p.D565V|1|0.5|ENSG00000205359|chr5:102399675-102399675|T/A|missense_variant'] 13220 19676 DLTPNQEYL True PC9_epitope_Rep3 1091.51350454599 1091.5124099358602 80.916 2 -0.2839851662526161 0.07123074416668175 0.9438714419765777 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209'] 90086 9938 RGQGPISL True PC9_epitope_Rep2 826.4661008611 826.4650099358599 43.557 2 -0.28401062347981487 0.07123074416668175 0.9438714419765777 ['ENST00000442114.6_2_6:43971070-43971394:+|nuORF'] 101042 13236 SLTLLQSNT True PC9_epitope_Rep5 975.52367530687 975.52256993586 55.92 2 -0.2841439559107927 0.07129927958585237 0.9438714419765777 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2', 'nc|ENSG00000166473|Q7Z442-4|PKD1L2', 'ENST00000299598.11_1_16:81199358-81222588:-|nuORF', 'nc|ENSG00000166473|Q7Z442-3|PKD1L2', 'ENST00000533478.5_1_16:81174978-81214887:-|nuORF', 'nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 34745 13112 GQPMIHIYL True NCI_RA007_Epitope_Rep3 1070.55828699378 1070.5571899358602 58.856 2 -0.284190314561078 0.07129927958585237 0.9438714419765777 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1', 'ENST00000483629.5_1_22:29688055-29694907:+|nuORF', 'ENST00000469669.5_1_22:29688055-29696148:+|nuORF', 'ENST00000479135.5_1_22:29687437-29696148:+|nuORF'] 64353 7665 LQNTNNANGI True PC9_epitope_Rep2 1057.51523588149 1057.5141299358602 34.853 2 -0.28421204510929254 0.07129927958585237 0.9438714419765777 ['ENSG00000105849|ENST00000222567|POLR1F'] 47317 19431 IYGGTYML True PC9_epitope_Rep4 916.4364405255999 916.43589496793 82.855 1 -0.2842196470738319 0.07131608956142416 0.9438714419765777 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2', 'ENST00000471972.1_1_X:153668686-153669692:+|nuORF', 'ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153669338-153669692:+|nuORF', 'ENST00000476540.1_1_X:153669338-153670248:+|nuORF'] 41879 8842 IDVSRHSILD True NCI_RA007_Epitope_Rep1 1153.60913626633 1153.60802993586 38.392 2 -0.28427632766921435 0.0713794476417997 0.9438714419765777 ['nc|ENSG00000242498|Q7Z6K5-2|ARPIN', 'ENSG00000242498|ENST00000357484|ARPIN'] 112639 9934 TPEQIEKIY True H1975_Epitope_Rep1 1119.5811901829898 1119.58008993586 43.146 2 -0.28429046750010223 0.0713794476417997 0.9438714419765777 ['ENSG00000086288|ENST00000199447|NME8'] 102226 9538 SPSRAQLPSL True NCI_RA007_Epitope_Rep3 1054.5771078620598 1054.5760099358602 44.605 2 -0.28432040387688556 0.0713794476417997 0.9438714419765777 ['ENST00000389851.8_2_4:1341218-1341545:+|nuORF'] 108791 9573 TEQETKVP True H1975_Epitope_Rep2 930.4658260775799 930.46472993586 41.797 2 -0.28432742586578824 0.0713794476417997 0.9438714419765777 ['nc|ENSG00000154358|Q5VST9-3|OBSCN'] 31970 5976 GESSFGSHLP True H1975_Epitope_Rep2 1016.45632402304 1016.45522993586 27.965 2 -0.2843373061358791 0.0713794476417997 0.9438714419765777 ['ENSG00000123307|ENST00000242994|NEUROD4'] 89525 4993 RERLEQQVP True NCI_RA007_Epitope_Rep1 1153.62036965637 1153.61872490379 23.505 3 -0.284365417968041 0.0713794476417997 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 90219 8736 RHKSYLQI True NCI_RA007_Epitope_Rep3 1043.58761297611 1043.58650993586 41.453 2 -0.28437082137178077 0.0713794476417997 0.9438714419765777 ['L1ME1_dup6617|chr3:129847425-129848424:-|1.1624042579176193|0.4453241998369115|1.38|502.0|29|3|sense'] 3627 8009 AGPSLPPPAA True PC9_epitope_Rep4 876.4705175351999 876.46942993586 38.255 2 -0.28440691774692783 0.0714298640896176 0.9438714419765777 ['ENST00000455843.5_1_22:19705679-19706159:+|nuORF'] 123594 18435 VIKGTQASMV True PC9_epitope_Rep5 1032.5637662970398 1032.5626699358602 75.932 2 -0.28440872969793485 0.0714298640896176 0.9438714419765777 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'ENST00000479356.1_1_17:71354047-71433905:-|nuORF'] 118979 9066 VEFDSVQSA True NCI_RA007_Epitope_Rep3 980.445090633 980.44398993586 42.752 2 -0.2844311028315306 0.0714298640896176 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 128887 14550 VSTDAGVLL True PC9_epitope_Rep6 873.4807478657299 873.47964993586 67.861 2 -0.2844650184768192 0.0714402041148689 0.9438714419765777 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3'] 113001 18715 TPSTLALSV True PC9_epitope_Rep3 887.49639792987 887.49530993586 77.212 2 -0.2845434264238674 0.0714402041148689 0.9438714419765777 ['ENST00000487233.1_1_2:217364074-217364125:+|nuORF', 'ENST00000427280.6_1_2:217364074-217364681:+|nuORF'] 56356 6230 LDRMMKKLDTN True NCI_RA007_Epitope_Rep2 1363.6951914727497 1363.69354490379 28.839 3 -0.28455157221585886 0.0714402041148689 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 54981 19975 LAIGASFTV True PC9_epitope_Rep4 877.49091862661 877.49037496793 84.967 1 -0.2845769671781621 0.0714402041148689 0.9438714419765777 ['nc|ENSG00000104635|Q15043-2|SLC39A14', 'nc|ENSG00000104635|Q15043-3|SLC39A14', 'ENSG00000104635|ENST00000381237|SLC39A14'] 105796 20011 SVIIPGMTL True PC9_epitope_Rep6 929.52558988317 929.52448993586 89.638 2 -0.28461688060697365 0.0714402041148689 0.9438714419765777 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'ITFG2-TULP3|2|fusion', 'ITFG2-TULP3|1|fusion'] 130393 8424 VTVNKSLL True PC9_epitope_Rep4 872.53311779176 872.53202993586 39.867 2 -0.28462486993431196 0.0714402041148689 0.9438714419765777 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'CON__Q6NXH9', 'ENSG00000170484|ENST00000305620|KRT74', 'CON__Q7RTS7'] 4920 6814 ALGTESPR True PC9_epitope_Rep1 829.4293809992099 829.42828993586 31.015 2 -0.28475080579168666 0.07147510133178923 0.9438714419765777 ['ENSG00000167194|ENST00000681219|C16orf92', 'nc|ENSG00000167194|Q96LL3|FIMP'] 102880 11003 SQHQRWRNWQR True NCI_RA007_Epitope_Rep1 1580.7821238739198 1580.78102993586 46.792 2 -0.2848809839166877 0.07150740948486438 0.9438714419765777 ['ENST00000291074.9_2_17:505039-505090:-|nuORF'] 18781 5145 ELDRGYKSI True H1975_Epitope_Rep2 1079.5611234447501 1079.56002993586 24.868 2 -0.2848872529009501 0.07150740948486438 0.9438714419765777 ['ENSG00000108055|ENST00000361804|SMC3', 'ENST00000424783.1_1_2:99718519-99719212:+|nuORF'] 69903 7548 LYDEDILER True NCI_RA007_Epitope_Rep1 1164.5662683948399 1164.56516993586 33.353 2 -0.28491890511293566 0.07150740948486438 0.9438714419765777 ['nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 137746 7375 YNLKPQTSEK True NCI_RA007_Epitope_Rep2 1206.6244519773002 1206.62334993586 33.311 2 -0.28499365420128525 0.07152162113262167 0.9438714419765777 ['ENSG00000180251|ENST00000295269|SLC9A4'] 30104 19236 FYPPHPNYTW True PC9_epitope_Rep5 1320.5927579261997 1320.5916699358602 79.031 2 -0.28499874345415044 0.07152162113262167 0.9438714419765777 ['ENST00000483893.5_1_9:131186485-131189983:+|nuORF', 'nc|ENSG00000167123|Q5T4B2-2|CERCAM', 'ENSG00000167123|ENST00000372838|CERCAM'] 7412 7663 ASASALASA True PC9_epitope_Rep1 747.37628279719 747.37573496793 34.298 1 -0.2850301345425514 0.07152162113262167 0.9438714419765777 ['SLC17A7|p.G72Afs*86|1|0.43|ENSG00000104888|chr19:49436649-49436649|C/-|frameshift_variant'] 40141 8381 HRDSIVETL True PC9_epitope_Rep6 1068.5563724174801 1068.55526993586 41.901 2 -0.28506189213601857 0.07153712548849327 0.9438714419765777 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54579003-54603452:-|nuORF'] 125965 9172 VPAGGAVAV True PC9_epitope_Rep4 739.42283906679 739.42229496793 42.875 1 -0.2850675811857701 0.07153712548849327 0.9438714419765777 ['ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 65271 14653 LSEHNVLV True PC9_epitope_Rep3 909.4919812557699 909.49088993586 61.497 2 -0.2851151221836251 0.0715720152696615 0.9438714419765777 ['ENSG00000168795|ENST00000307750|ZBTB5'] 30379 11343 GAERITDVAL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 54.67 2 -0.28516640623371897 0.07158881209972139 0.9438714419765777 ['ENST00000473604.2_1_9:132580793-132585603:-|nuORF', 'ENSG00000136827|ENST00000351698|TOR1A'] 37489 13453 GYEPPVQESV True PC9_epitope_Rep4 1103.51350454599 1103.51297496793 59.645 1 -0.28522507887410936 0.07160560832202623 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 86218 5059 QPWRGGAGA True PC9_epitope_Rep1 898.4409487424198 898.43984993586 24.316 2 -0.28526632889805176 0.07162240393660901 0.9438714419765777 ['ENSG00000165684|ENST00000684778|SNAPC4'] 35413 18153 GTDGFVINL True PC9_epitope_Rep5 934.47599683846 934.47488993586 74.834 2 -0.2853553029999117 0.07167538035711055 0.9438714419765777 ['ENSG00000100079|ENST00000215886|LGALS2'] 26266 20795 FICVGRNVLT True PC9_epitope_Rep1 1120.6062998153598 1120.60520993586 84.818 2 -0.2855010431477737 0.07172835486088498 0.9438714419765777 ['ENSG00000166111|ENST00000610966|SVOP'] 121206 14903 VGGPEIEVG True PC9_epitope_Rep1 855.4337976733099 855.43270993586 62.145 2 -0.2855246029436645 0.07174514734347583 0.9438714419765777 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 83231 18053 QAAQLLQV True PC9_epitope_Rep1 869.49706663621 869.49596993586 74.235 2 -0.2855709697873797 0.07177873048606212 0.9438714419765777 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 82111 6628 PTASLPAT True NCI_RA007_Epitope_Rep2 756.4017692690401 756.40122496793 30.392 1 -0.28557492775898535 0.07177873048606212 0.9438714419765777 ['ENST00000436467.3_1_2:73520434-73520539:-|nuORF'] 57986 9277 LEQTDIQGA True H1975_Epitope_Rep1 973.4716397340097 973.4710949679301 40.596 1 -0.28558330498868567 0.07179162521479605 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 105328 9092 [Acetylation]-STVHEILC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 1127.56449516876 1127.5633899358602 39.97 2 -0.2855911361159484 0.07179162521479605 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 83313 16014 QALLC[Carbamidomethyl]LTEL True PC9_epitope_Rep5 1059.5634322233 1059.5623299358601 66.588 2 -0.28560076513567934 0.07179162521479605 0.9438714419765777 ['SNRPA1|p.P88L|1|0.22|ENSG00000131876|chr15:101292008-101292008|G/A|missense_variant'] 44529 18459 IPAKITVTI True PC9_epitope_Rep2 954.61136811246 954.61026993586 76.336 2 -0.2856340747024208 0.07179162521479605 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1'] 96890 6832 SETEATPVP True H1975_Epitope_Rep3 929.4341915961298 929.43308993586 31.235 2 -0.28572364301370673 0.07180321938867788 0.9438714419765777 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 120877 8639 VGDVFRGG True PC9_epitope_Rep2 805.4082516318099 805.40714993586 38.595 2 -0.28572676643483635 0.07180321938867788 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 89522 4234 RERFIEQEKA True NCI_RA007_Epitope_Rep4 1304.6836981889198 1304.68204490379 22.601 3 -0.2857670142983076 0.07180321938867788 0.9438714419765777 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 117915 14200 VAQLKQLQAET True PC9_epitope_Rep2 1227.6823012065897 1227.6812099358601 59.887 2 -0.2857846139378023 0.07180321938867788 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 126274 9445 VPHLLTEA True PC9_epitope_Rep4 878.48616759934 878.48506993586 43.941 2 -0.28582061131396247 0.07180321938867788 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 31175 9844 GDFC[Carbamidomethyl]IQVGR True NCI_RA007_Epitope_Rep1 1050.49166426537 1050.49056993586 42.292 2 -0.28585524586411426 0.07185617912499322 0.9438714419765777 ['nc|ENSG00000243678|P22392-2|NME2', 'ENSG00000243678|ENST00000512737|NME2', 'ENSG00000239672|ENST00000393196|NME1', 'nc|ENSG00000239672|P15531-2|NME1', 'nc|ENSG00000123009|O60361|NME2P1', 'ENST00000570801.1_1_17:49245578-49248962:+|nuORF', 'ENST00000475573.5_1_17:49238508-49239203:+|nuORF', 'ENST00000511355.5_1_17:49238508-49238634:+|nuORF', 'NMT1-NME1|1|fusion'] 106297 5181 SVRESFHRR True PC9_epitope_Rep1 1172.61628733544 1172.61463490379 24.782 3 -0.28594890413426144 0.07187296534760906 0.9438714419765777 ['ENSG00000133030|ENST00000651222|MPRIP'] 135342 17266 YDDKIYYF True NCI_RA007_Epitope_Rep4 1125.5018772331298 1125.5007899358602 74.765 2 -0.28606375165136 0.07192071902634863 0.9438714419765777 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 77957 12281 PALALAAT True PC9_epitope_Rep3 726.4275900940601 726.4270449679301 52.267 1 -0.28608649370599126 0.07192071902634863 0.9438714419765777 ['ENST00000551489.5_1_12:107349705-107350883:+|nuORF'] 83451 8119 QDDEARVQY True H1975_Epitope_Rep1 1122.4941660837399 1122.4930699358601 36.175 2 -0.2861017521551991 0.07192071902634863 0.9438714419765777 ['ENSG00000165733|ENST00000374518|BMS1', 'ENST00000443754.1_1_9:67328347-67334199:-|nuORF'] 96990 11365 SEVM[Oxidation]EELEKVK True H1975_Epitope_Rep3 1335.6591831839498 1335.65808993586 48.827 2 -0.28617015195072837 0.07192071902634863 0.9438714419765777 ['ENSG00000114446|ENST00000264538|IFT57'] 106518 16100 SVVQGTLGV True PC9_epitope_Rep5 858.4810822188999 858.47998993586 66.916 2 -0.2861952852783869 0.07192071902634863 0.9438714419765777 ['ENSG00000163872|ENST00000305135|YEATS2', 'YEATS2-ATP11B|1|fusion'] 56442 11186 LDSMENIPPP True H1975_Epitope_Rep2 1111.52196105471 1111.5208699358602 48.065 2 -0.28628941349867154 0.07192969767105453 0.9438714419765777 ['ENST00000338154.10_1_X:53964145-53964379:-|nuORF'] 72565 14015 MVLGEVNI True NCI_RA007_Epitope_Rep4 873.4629896266099 873.4624449679301 61.188 1 -0.28634428765435255 0.07192969767105453 0.9438714419765777 ['ENSG00000134259|ENST00000369512|NGF'] 124796 8248 VLLFMQLVP True NCI_RA007_Epitope_Rep5 1058.61982462118 1058.61872993586 38.404 2 -0.2863630849264739 0.07192969767105453 0.9438714419765777 ['ENSG00000197375|ENST00000245407|SLC22A5', 'nc|ENSG00000197375|O76082-3|SLC22A5', 'ENST00000448810.5_1_5:131726469-131729504:+|nuORF', 'nc|ENSG00000197375|O76082-2|SLC22A5', 'ENST00000475308.1_1_5:131726319-131729961:+|nuORF', 'ENST00000461013.5_1_5:131719758-131729961:+|nuORF'] 138802 12091 YSDGLGGNSLY True H1975_Epitope_Rep3 1144.5036681382799 1144.50307496793 51.673 1 -0.2864287003969435 0.07192969767105453 0.9438714419765777 ['nc|ENSG00000167081|P40426-3|PBX3', 'nc|ENSG00000167081|P40426-5|PBX3', 'ENSG00000167081|ENST00000373489|PBX3'] 106268 10840 SVQKLVVVI True PC9_epitope_Rep6 983.6379172134698 983.63682993586 52.554 2 -0.2864458433883109 0.07192969767105453 0.9438714419765777 ['ENSG00000164109|ENST00000296509|MAD2L1'] 83362 17627 QAQLLANL True PC9_epitope_Rep2 869.49706663621 869.49651496793 73.08 1 -0.28644686875301784 0.07192969767105453 0.9438714419765777 ['ENSG00000165644|ENST00000372538|COMTD1', 'ENST00000460899.5_1_10:76994802-76995157:-|nuORF', 'ENST00000470947.5_1_10:76993833-76995157:-|nuORF'] 55080 19345 LALLAALL True H1975_Epitope_Rep1 796.54222592348 796.54167496793 80.586 1 -0.28647674729635303 0.07192969767105453 0.9438714419765777 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1', 'ROR1-PGM1|1|fusion'] 56352 22372 LDRLRKKRHLL True NCI_RA007_Epitope_Rep3 1446.9259345732999 1446.92428490379 97.227 3 -0.2866179501517251 0.07194647861856975 0.9438714419765777 ['ENSG00000178605|ENST00000326153|GTPBP6'] 114261 16949 TSAESFVNV True PC9_epitope_Rep2 952.45017601344 952.44962496793 70.437 1 -0.28663565197917984 0.07195805460133792 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 127341 21520 VQNVDLVLA True PC9_epitope_Rep3 969.5494961318898 969.5489449679301 88.071 1 -0.28665918145228847 0.07195805460133792 0.9438714419765777 ['ENST00000424556.2_1_11:1856509-1858658:+|nuORF', 'ENSG00000149043|ENST00000341958|SYT8'] 48707 5245 KEMPTVAQA True NCI_RA007_Epitope_Rep1 973.4902670036098 973.48916993586 24.486 2 -0.28668981660255866 0.07195805460133792 0.9438714419765777 ['nc|ENSG00000103710|Q9NYN1-3|RASL12', 'nc|ENSG00000103710|Q9NYN1-2|RASL12', 'ENSG00000103710|ENST00000220062|RASL12'] 41606 17534 IDFPRHLDF True PC9_epitope_Rep5 1158.5821932425 1158.58054490379 72.45 3 -0.286690384626821 0.07195805460133792 0.9438714419765777 ['ENST00000561423.2_1_15:101093736-101094444:-|nuORF', 'ENSG00000183943|ENST00000262848|PRKX'] 65120 9402 LSDPLTTVP True H1975_Epitope_Rep1 941.5069626135701 941.50586993586 41.077 2 -0.2867285195239243 0.07195805460133792 0.9438714419765777 ['ENST00000583038.5_1_17:37872360-37881463:+|nuORF', 'ENST00000582788.5_1_17:37872360-37873734:+|nuORF'] 117249 20514 TYYCQQANSF True PC9_epitope_Rep4 1223.4917235555902 1223.4906299358602 87.057 2 -0.2867347583967096 0.07197353196413075 0.9438714419765777 ['nc|ENSG00000278857|P01611|IGKV1D-12', 'nc|ENSG00000243290|A0A0C4DH73|IGKV1-12'] 75236 6943 NPKEFYHEV True PC9_epitope_Rep2 1161.54547338061 1161.54436993586 32.107 2 -0.28677987316100084 0.07197353196413075 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 95012 16930 RYQQIESYYP True PC9_epitope_Rep5 1345.6302656337298 1345.62862490379 70.137 3 -0.2869011217073864 0.07202516541924286 0.9438714419765777 ['RC3H1|p.P1010Tfs*14|1|0.12|ENSG00000135870|chr1:173943550-173943551|-/G|frameshift_variant', 'nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 16735 5360 EEYEYMNRRRR True NCI_RA007_Epitope_Rep2 1600.75285746124 1600.75065987172 25.468 4 -0.2869369416411742 0.07202516541924286 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 56351 21843 LDRLRKKRHLL True NCI_RA007_Epitope_Rep3 1446.9259345732999 1446.92428490379 94.887 3 -0.2871076825787158 0.07209487309277605 0.9438714419765777 ['ENSG00000178605|ENST00000326153|GTPBP6'] 28302 13065 FRYMRIYRRYI True H1975_Epitope_Rep3 1635.8820211559898 1635.8809299358602 55.496 2 -0.2871727725493942 0.07209487309277605 0.9438714419765777 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 46695 11532 ITWTLDDDP True PC9_epitope_Rep1 1074.48695544498 1074.4858499358602 49.237 2 -0.2872769014317031 0.07212972503931883 0.9438714419765777 ['nc|ENSG00000171587|O60469-2|DSCAM', 'ENSG00000171587|ENST00000400454|DSCAM'] 53290 7351 KTKRRILIRFN True NCI_RA007_Epitope_Rep4 1443.9150355364297 1443.91339490379 34.916 3 -0.28743900278498863 0.07214649842727502 0.9438714419765777 ['ENST00000415149.6_1_3:107429416-107435478:+|nuORF'] 63471 13633 LPHGFTNMA True PC9_epitope_Rep1 986.4643866089401 986.46328993586 57.295 2 -0.28755170260868557 0.07221750212404418 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 66462 4581 LSRRAHALPPP True NCI_RA007_Epitope_Rep3 1213.7043740638499 1213.70272490379 24.907 3 -0.28759337394361373 0.07226781388959184 0.9438714419765777 ['ENST00000440114.1_1_2:198362106-198364543:-|nuORF'] 54845 19833 LAGASLVLS True PC9_epitope_Rep6 829.49091862661 829.49037496793 88.949 1 -0.28760909499922255 0.07226781388959184 0.9438714419765777 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2'] 109703 10616 THFHELTAL True PC9_epitope_Rep6 1067.53999407735 1067.5388899358602 51.652 2 -0.28765902919753034 0.07226781388959184 0.9438714419765777 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 65978 14824 LSLRWVSP True PC9_epitope_Rep3 956.5443511817999 956.54324993586 62.157 2 -0.2878142898023918 0.0722845832655496 0.9438714419765777 ['CRLF1|p.V255L|1|0.42|ENSG00000006016|chr19:18596984-18596984|C/A|missense_variant'] 76034 17521 NRLDFSTAI True PC9_epitope_Rep3 1035.53490869691 1035.53380993586 72.579 2 -0.28786003067975025 0.07233488775620865 0.9438714419765777 ['ENST00000287396.2_1_8:124515615-124544254:-|nuORF', 'ENSG00000156804|ENST00000517956|FBXO32', 'ENST00000520511.1_1_8:124539464-124553254:-|nuORF', 'FBXO32|p.S116Lfs*38|3|0.15|ENSG00000156804|chr8:123531910-123531923|GTTAAATCTTCTGG/-|frameshift_variant', 'nc|ENSG00000156804|Q969P5-2|FBXO32', 'ENST00000521719.5_1_8:124526414-124553254:-|nuORF'] 52635 4625 KQEEYSRSLLK True NCI_RA007_Epitope_Rep2 1379.74087871187 1379.73922490379 22.615 3 -0.28786632602975487 0.07233488775620865 0.9438714419765777 ['ENSG00000149201|ENST00000445632|CCDC81', 'nc|ENSG00000149201|Q6ZN84-3|CCDC81', 'nc|ENSG00000149201|Q6ZN84-2|CCDC81'] 38059 3819 HELQSRLNR True NCI_RA007_Epitope_Rep2 1151.61595298227 1151.61430490379 19.49 3 -0.2879676725698179 0.07233488775620865 0.9438714419765777 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 15325 5519 EAKQMIAV True NCI_RA007_Epitope_Rep4 888.4738886634798 888.47278993586 27.823 2 -0.2880890385534698 0.07235165470746652 0.9438714419765777 ['ENST00000494748.1_1_1:1152894-1154464:-|nuORF', 'nc|ENSG00000078808|Q9BRK5-2|SDF4', 'ENST00000478938.1_1_1:1152894-1154464:-|nuORF', 'ENSG00000078808|ENST00000360001|SDF4', 'nc|ENSG00000078808|Q9BRK5|SDF4', 'ENST00000465727.5_1_1:1152894-1153089:-|nuORF', 'nc|ENSG00000078808|Q9BRK5-5|SDF4'] 71821 18512 MPAGSFITA True PC9_epitope_Rep3 893.43168949833 893.4311449679301 76.425 1 -0.2881622109224996 0.07240326049630393 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000439235.5_1_17:7812698-7814900:+|nuORF', 'ENST00000481999.1_1_17:7813558-7814900:+|nuORF', 'ENST00000470531.5_3_17:7807732-7814900:+|nuORF'] 52998 4284 KRRFQYEEEVK True NCI_RA007_Epitope_Rep5 1510.7892258866202 1510.78759490379 23.058 3 -0.28816236776708326 0.07240326049630393 0.9438714419765777 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 81328 5004 PPRPPPPPP True PC9_epitope_Rep2 950.5337864980999 950.53268993586 24.618 2 -0.2882479898577062 0.07242002530272908 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 138319 16913 YRAPELVL True PC9_epitope_Rep5 959.5440168286299 959.54346496793 70.071 1 -0.28828639733613703 0.07243678950317183 0.9438714419765777 ['nc|ENSG00000273345|Q8IVW4-2|CDKL3', 'ENSG00000006837|ENST00000265334|CDKL3'] 55682 7997 LDCAHTAASF True PC9_epitope_Rep3 1034.44913046762 1034.4480299358602 35.738 2 -0.2883226521208656 0.07245224368821498 0.9438714419765777 ['ENST00000336812.4_1_4:24586045-24586090:-|nuORF'] 112725 21078 TPIAGDYILF True PC9_epitope_Rep6 1108.5804619069997 1108.57936993586 93.9 2 -0.2883783091669584 0.07245224368821498 0.9438714419765777 ['nc|ENSG00000071073|Q9UM21-2|MGAT4A', 'ENSG00000071073|ENST00000393487|MGAT4A'] 120384 11488 VFRYNSSL True PC9_epitope_Rep1 984.50288029264 984.50178993586 49.069 2 -0.28841407401963776 0.0724676967561218 0.9438714419765777 ['nc|ENSG00000186272|P17021-3|ZNF17', 'ENST00000602050.1_1_19:57930944-57932846:+|nuORF', 'nc|ENSG00000186272|P17021|ZNF17', 'ENSG00000186272|ENST00000307658|ZNF17'] 137656 18779 YLYLQANLI True PC9_epitope_Rep4 1109.6120963884498 1109.61098993586 80.317 2 -0.28841876651814324 0.0724676967561218 0.9438714419765777 ['ENSG00000225968|ENST00000424383|ELFN1'] 11157 8907 DEGIFISK True NCI_RA007_Epitope_Rep1 907.46509780159 907.46400993586 38.646 2 -0.28850304307349806 0.07253867283504409 0.9438714419765777 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 11274 4078 DERSKEYSI True NCI_RA007_Epitope_Rep4 1125.5302172392899 1125.52858490379 21.96 3 -0.28863273322607363 0.07257350416538663 0.9438714419765777 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000470518.5_1_22:40803281-40805023:+|nuORF'] 100006 5249 SLITVSAAK True NCI_RA007_Epitope_Rep5 888.5280324113199 888.52692993586 26.887 2 -0.2886606999258172 0.0725902634717554 0.9438714419765777 ['ENST00000474863.5_1_1:222885158-222885545:-|nuORF'] 112684 8025 TPGCTLHCPSL True PC9_epitope_Rep2 1127.51035082519 1127.5087049037902 36.229 3 -0.2886886315971215 0.07262509261099767 0.9438714419765777 ['ENST00000584684.1_1_17:37873623-37876175:+|nuORF'] 99788 6875 SLGRAPSL True NCI_RA007_Epitope_Rep5 799.45520182423 799.45410993586 33.126 2 -0.28873152089506443 0.07264185037947235 0.9438714419765777 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G', 'nc|ENSG00000006283|O43497-30|CACNA1G', 'nc|ENSG00000006283|O43497-29|CACNA1G', 'nc|ENSG00000006283|O43497-28|CACNA1G', 'nc|ENSG00000006283|O43497-32|CACNA1G', 'nc|ENSG00000006283|O43497-31|CACNA1G', 'nc|ENSG00000006283|O43497-27|CACNA1G', 'nc|ENSG00000196557|O95180-2|CACNA1H', 'ENSG00000196557|ENST00000348261|CACNA1H'] 119313 6600 VELQQEEQAR True NCI_RA007_Epitope_Rep1 1228.6047791618798 1228.60368993586 29.686 2 -0.28876991768889665 0.07265729464059846 0.9438714419765777 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6'] 112105 19892 TLTQVSTWF True PC9_epitope_Rep4 1081.54441075145 1081.5433099358602 84.647 2 -0.28879607787952777 0.07265729464059846 0.9438714419765777 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5', 'ENSG00000159387|ENST00000290552|IRX6', 'ENSG00000113430|ENST00000231357|IRX4', 'nc|ENSG00000113430|P78413-2|IRX4', 'ENSG00000177508|ENST00000329734|IRX3', 'ENST00000558180.2_1_16:54318400-54319510:-|nuORF', 'IRX2|p.A215Qfs*69|1|0.3|ENSG00000170561|chr5:2749394-2749394|C/-|frameshift_variant', 'ENSG00000170561|ENST00000302057|IRX2'] 17497 15813 EHIFKWIT True PC9_epitope_Rep4 1072.57056592964 1072.56946993586 68.749 2 -0.28883946021947704 0.07272825831631824 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 97876 13879 SHLGSKYNSL True PC9_epitope_Rep1 1104.5563724174801 1104.55526993586 58.224 2 -0.28890472918298504 0.07274501300954032 0.9438714419765777 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 96918 5951 SETPKPDVSK True NCI_RA007_Epitope_Rep2 1086.5557037111398 1086.55460993586 27.758 2 -0.2889207652892653 0.0727798355768362 0.9438714419765777 ['ENSG00000188738|ENST00000424728|FSIP2'] 135482 4867 YEDESSRGVP True H1975_Epitope_Rep3 1137.49383173057 1137.49272993586 23.846 2 -0.2890555372737577 0.07279264304684818 0.9438714419765777 ['EDRF1|p.G646V|1|0.35|ENSG00000107938|chr10:125738401-125738401|G/T|missense_variant'] 29863 19011 FVWSGTAEA True PC9_epitope_Rep3 966.4446967101799 966.44358993586 78.348 2 -0.2890685855241219 0.07279264304684818 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 6420 13225 APSGNFVAC True PC9_epitope_Rep3 864.37998827864 864.37943496793 55.905 1 -0.28912154324687517 0.07279264304684818 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 64371 7256 LQQAVIYEREP True NCI_RA007_Epitope_Rep1 1344.7037649271601 1344.70266993586 32.214 2 -0.2891390979690166 0.07279264304684818 0.9438714419765777 ['ENSG00000178750|ENST00000315099|STX19'] 83922 7384 QEKEAIERLK True NCI_RA007_Epitope_Rep5 1242.6932002434598 1242.6915449037901 35.081 3 -0.28915216537853283 0.07280807934815993 0.9438714419765777 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B', 'nc|ENSG00000179262|P54725-3|RAD23A', 'ENSG00000179262|ENST00000586534|RAD23A'] 128938 19817 VSTVTTLSV True PC9_epitope_Rep6 905.50696261357 905.50586993586 88.885 2 -0.2892144195941099 0.07280807934815993 0.9438714419765777 ['ENSG00000157637|ENST00000374759|SLC38A10', 'nc|ENSG00000157637|Q9HBR0-2|SLC38A10', 'SLC38A10|p.V758Cfs*76|1|0.35|ENSG00000157637|chr17:81246644-81246644|C/-|frameshift_variant', 'nc|ENSG00000157637|Q9HBR0-3|SLC38A10'] 41204 14322 IADEGTWTL True NCI_RA007_Epitope_Rep4 1004.48147614172 1004.48036993586 62.395 2 -0.289346680864231 0.07289709495591848 0.9438714419765777 ['ENSG00000170584|ENST00000302764|NUDCD2'] 82548 11344 PVGEGLGSL True PC9_epitope_Rep4 827.4388830537499 827.43778993586 51.411 2 -0.2894124472225051 0.07292927468160058 0.9438714419765777 ['ENSG00000135631|ENST00000486777|RAB11FIP5'] 33632 18276 GLNDLLNV True PC9_epitope_Rep5 856.46543215476 856.4648849679301 75.311 1 -0.2894322504246119 0.07292927468160058 0.9438714419765777 ['nc|ENSG00000018280|P49279-2|SLC11A1', 'ENSG00000018280|ENST00000233202|SLC11A1', 'ENST00000490536.1_1_2:219257709-219258917:+|nuORF'] 4274 18480 AIIQCEVV True PC9_epitope_Rep4 873.4629896266099 873.46188993586 79.154 2 -0.28950412889347377 0.07292927468160058 0.9438714419765777 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 28083 10960 FRDSGLLG True PC9_epitope_Rep5 863.4501164437899 863.44900993586 47.147 2 -0.28955528170206335 0.07294602211142423 0.9438714419765777 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 5263 9133 ALREAAEV True PC9_epitope_Rep2 857.4606811274898 857.45958993586 40.47 2 -0.2895863480546542 0.07297819686049242 0.9438714419765777 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF'] 77521 9029 NYQKRFQNL True PC9_epitope_Rep1 1209.6254550368096 1209.62380490379 39.58 3 -0.2896019737505561 0.07297819686049242 0.9438714419765777 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 100370 13161 SLNILSSSN True H1975_Epitope_Rep3 933.4767251144501 933.4761749679301 55.874 1 -0.28960830520871883 0.07297819686049242 0.9438714419765777 ['ENST00000486056.1_1_9:35732760-35733244:+|nuORF', 'nc|ENSG00000107175|O43889-3|CREB3', 'ENSG00000107175|ENST00000353704|CREB3'] 130252 7957 VTSSPNAI True PC9_epitope_Rep2 787.40758292547 787.40648993586 35.97 2 -0.28963906483849344 0.07299230519128644 0.9438714419765777 ['ENSG00000163810|ENST00000296125|TGM4'] 72926 4810 NCAYLGGEK True NCI_RA007_Epitope_Rep1 953.4276667470499 953.42656993586 22.791 2 -0.2896414752147816 0.07299230519128644 0.9438714419765777 ['ENSG00000167311|ENST00000397068|ART5'] 367 8191 AALARAALA True PC9_epitope_Rep1 826.5024863698198 826.5019349679301 36.341 1 -0.2896954490895496 0.07299230519128644 0.9438714419765777 ['ENSG00000116032|ENST00000234389|GRIN3B', 'GRIN3B|p.S402Lfs*19|1|0.44|ENSG00000116032|chr19:1004703-1004703|C/-|frameshift_variant', 'GRIN3B|p.K416Sfs*5|1|0.19|ENSG00000116032|chr19:1004744-1004744|C/-|frameshift_variant'] 29241 16284 FVDEPLIHATT True PC9_epitope_Rep5 1241.6292030045697 1241.62810993586 67.631 2 -0.28976584337846195 0.0730050933786078 0.9438714419765777 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 89640 9103 REVDPLRIPP True H1975_Epitope_Rep1 1190.6771562565 1190.6760499358602 39.918 2 -0.28978998481729407 0.0730050933786078 0.9438714419765777 ['ENST00000484891.1_1_20:1115545-1145721:+|nuORF', 'ENSG00000125818|ENST00000335877|PSMF1'] 133542 5917 WHLDIFRRSFR True NCI_RA007_Epitope_Rep5 1531.81604977115 1531.81385987172 29.445 4 -0.2898075629201158 0.0730050933786078 0.9438714419765777 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF', 'USP54|p.S1440*|1|0.29|ENSG00000166348|chr10:73500821-73500831|CCTCACGTTTG/-|frameshift_variant', 'nc|ENSG00000166348|Q70EL1-4|USP54'] 67760 15965 LTGTWTSV True PC9_epitope_Rep3 863.43888305375 863.43778993586 66.556 2 -0.2898125237354424 0.0730050933786078 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 100179 10651 SLLGEELPP True H1975_Epitope_Rep2 953.5069626135698 953.50586993586 45.994 2 -0.28992364827572464 0.07303857824013871 0.9438714419765777 ['ENSG00000089558|ENST00000264661|KCNH4'] 4334 12496 AINELMQMRLR True H1975_Epitope_Rep1 1373.7271603073698 1373.72606993586 53.106 2 -0.28994806978937926 0.07303857824013871 0.9438714419765777 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68'] 61901 17070 LLLKREVP True PC9_epitope_Rep1 966.6226015025 966.62150993586 70.485 2 -0.2900049387343158 0.07305400036120643 0.9438714419765777 ['nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENSG00000101745|ENST00000262126|ANKRD12', 'ANKRD12|p.I828Rfs*5|1|0.2|ENSG00000101745|chr18:9255747-9255751|AAATT/-|frameshift_variant', 'ENST00000540578.6_1_18:9182415-9235682:+|nuORF'] 37659 13740 HAGVISVL True PC9_epitope_Rep2 794.46503823194 794.46394993586 58.139 2 -0.29002956494301946 0.07305400036120643 0.9438714419765777 ['ENSG00000134248|ENST00000602318|LAMTOR5', 'ENST00000531779.1_1_1:110946539-110950281:-|nuORF'] 82636 6276 PVLKNPDDPDT True PC9_epitope_Rep6 1209.5877321154098 1209.5866299358602 32.647 2 -0.2901757618388342 0.07310554070649426 0.9438714419765777 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 98378 8027 SIHQSVVAV True PC9_epitope_Rep5 938.5185303567798 938.51742993586 35.814 2 -0.29021592565203613 0.07310554070649426 0.9438714419765777 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 105944 22207 SVLETSPDILL True PC9_epitope_Rep1 1185.64926974281 1185.64816993586 90.24 2 -0.2902406522320204 0.07312227981146045 0.9438714419765777 ['ENSG00000119514|ENST00000375011|GALNT12'] 10336 16463 C[Carbamidomethyl]IESLIAVFQK True NCI_RA007_Epitope_Rep2 1306.6955090220097 1306.6944099358602 68.765 2 -0.2902868776316617 0.07312713287470884 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 8471 5041 ATTKCHKCTYK True NCI_RA007_Epitope_Rep4 1282.61621287606 1282.6145549037901 25.883 3 -0.2902939955163613 0.07312713287470884 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 96992 11904 SEVM[Oxidation]EELEKVK True NCI_RA007_Epitope_Rep1 1335.6591831839498 1335.65808993586 50.288 2 -0.29033690764161785 0.07312713287470884 0.9438714419765777 ['ENSG00000114446|ENST00000264538|IFT57'] 108528 3825 TEFSDYLRLQR True NCI_RA007_Epitope_Rep2 1426.7204776204599 1426.71883490379 19.513 3 -0.290394300089941 0.07312713287470884 0.9438714419765777 ['nc|ENSG00000198553|Q8N5I3-2|KCNRG', 'ENSG00000198553|ENST00000312942|KCNRG'] 53433 11500 KVIDDTNITRL True PC9_epitope_Rep4 1286.7194149913 1286.7183099358601 51.997 2 -0.29039812929714953 0.07312713287470884 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 125761 14293 VNIEQFRELKN True H1975_Epitope_Rep3 1388.7412130650398 1388.7401099358601 60.321 2 -0.29040954940239305 0.07312713287470884 0.9438714419765777 ['NFKBIZ|p.L413Gfs*54|1|0.11|ENSG00000144802|chr3:101853761-101853764|AGTT/-|frameshift_variant', 'NFKBIZ|p.G538Efs*16|1|0.24|ENSG00000144802|chr3:101855415-101855415|G/-|frameshift_variant', 'nc|ENSG00000144802|Q9BYH8-3|NFKBIZ', 'nc|ENSG00000144802|Q9BYH8-2|NFKBIZ', 'ENSG00000144802|ENST00000326172|NFKBIZ'] 11056 10785 DDPLAAFK True H1975_Epitope_Rep1 875.4388830537499 875.43833496793 46.446 1 -0.29041482199208707 0.07312713287470884 0.9438714419765777 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 3021 16188 AFRTLSELVL True PC9_epitope_Rep5 1147.66010921003 1147.6584749037902 67.256 3 -0.29042122947000615 0.07312713287470884 0.9438714419765777 ['ENSG00000071246|ENST00000167106|VASH1'] 140411 17687 YYFDHNSNW True PC9_epitope_Rep5 1244.48868678048 1244.4875899358601 73.047 2 -0.2904358630554217 0.07312713287470884 0.9438714419765777 ['ENSG00000100147|ENST00000255784|CCDC134'] 105977 8622 SVLIQKQIFK True NCI_RA007_Epitope_Rep1 1202.7386938838997 1202.7370349037901 37.539 3 -0.2904674884540858 0.07312713287470884 0.9438714419765777 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENST00000528833.1_1_11:9431619-9435997:+|nuORF'] 106207 17905 SVPNKDVFQEL True PC9_epitope_Rep1 1274.65066672514 1274.6495699358602 73.663 2 -0.29049959926397395 0.07313858597530151 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 76817 21143 NVELILDIA True PC9_epitope_Rep4 998.5648118428599 998.56370993586 89.489 2 -0.29054410481846427 0.07313858597530151 0.9438714419765777 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 81514 19918 PQSLFTLFG True PC9_epitope_Rep6 1008.5280324113199 1008.52692993586 89.271 2 -0.29064506504980225 0.07313858597530151 0.9438714419765777 ['PTBP2|p.A484Rfs*2|2|0.3|ENSG00000117569|chr1:96813062-96813063|-/T|frameshift_variant', 'ENSG00000117569|ENST00000674951|PTBP2', 'nc|ENSG00000117569|Q9UKA9-2|PTBP2', 'nc|ENSG00000117569|Q9UKA9-4|PTBP2', 'nc|ENSG00000117569|Q9UKA9-3|PTBP2'] 41590 6064 IDETLDVK True H1975_Epitope_Rep3 931.4862271689899 931.48512993586 28.336 2 -0.29066131724025357 0.07313858597530151 0.9438714419765777 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'nc|ENSG00000084234|Q06481-6|APLP2', 'ENST00000525604.1_1_11:130011383-130011476:+|nuORF', 'ENST00000533860.5_1_11:130009456-130013340:+|nuORF'] 72012 17810 MQGPPLLTAA True PC9_epitope_Rep6 997.52665251233 997.52554993586 81.138 2 -0.29066298930821094 0.07313858597530151 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 126939 10065 VPVHDIYVSQ True PC9_epitope_Rep6 1155.59242357303 1155.5913299358601 49.305 2 -0.2907165864126357 0.07315399891677198 0.9438714419765777 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 134796 20501 WYMDNPQNL True PC9_epitope_Rep5 1179.5018943164698 1179.5007899358602 83.896 2 -0.29076447395134514 0.07315399891677198 0.9438714419765777 ['PLEKHA1-BTBD16|1|fusion', 'ENSG00000169499|ENST00000617275|PLEKHA2', 'ENSG00000107679|ENST00000368990|PLEKHA1', 'nc|ENSG00000107679|Q9HB21-2|PLEKHA1'] 15436 12297 EANGAYVL True PC9_epitope_Rep5 835.4075829254699 835.40648993586 52.291 2 -0.29084337982552017 0.07317073170731707 0.9438714419765777 ['ENST00000466199.1_1_7:2406190-2411546:+|nuORF'] 41921 10869 IEALQKAG True PC9_epitope_Rep5 828.4705175351999 828.46942993586 46.796 2 -0.29091567823389697 0.07318746389370306 0.9438714419765777 ['ATP11A-CUL4A|2|fusion', 'ATP11A|p.R1107Sfs*4|1|0.16|ENSG00000068650|chr13:112875929-112875930|AG/-|frameshift_variant', 'TFDP1-ATP11A|2|fusion', 'ENSG00000068650|ENST00000375645|ATP11A', 'TFDP1-ATP11A|1|fusion', 'ENST00000459908.5_1_13:113439469-113512287:+|nuORF'] 119667 8338 VESPESLAA True H1975_Epitope_Rep3 901.4392769765699 901.43872496793 37.057 1 -0.29095528929684683 0.07322224829852148 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12'] 86283 9673 QQDPQQYNV True PC9_epitope_Rep5 1118.49925146418 1118.49867496793 42.175 1 -0.29101398326898514 0.0732363347534118 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 56258 8950 LDQETFSICK True NCI_RA007_Epitope_Rep2 1182.55907483942 1182.55796993586 39.433 2 -0.29102079183514235 0.0732363347534118 0.9438714419765777 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2'] 53530 16677 KVPEWVDTV True PC9_epitope_Rep2 1071.5600608155898 1071.5594749679299 69.392 1 -0.2910927383763059 0.0732363347534118 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 101460 6491 SNNPLRYKFSC True NCI_RA007_Epitope_Rep1 1327.63430546835 1327.6332099358601 29.267 2 -0.2911496031105102 0.07325306424535624 0.9438714419765777 ['AASS|p.W652C|1|0.37|ENSG00000008311|chr7:122091763-122091763|C/A|missense_variant'] 99841 5891 SLGYPSTTLP True H1975_Epitope_Rep2 1034.52842633414 1034.52732993586 27.645 2 -0.2911707450887449 0.07326714801444044 0.9438714419765777 ['nc|ENSG00000033327|Q9UQC2-2|GAB2', 'ENSG00000033327|ENST00000361507|GAB2'] 25227 5774 FECECFEGY True H1975_Epitope_Rep2 1125.3783335961298 1125.3772299358602 27.205 2 -0.29117528343905863 0.07326714801444044 0.9438714419765777 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2'] 65477 17013 LSFHTGDVL True PC9_epitope_Rep4 987.5025459394699 987.50144993586 73.433 2 -0.2912006721009915 0.07326714801444044 0.9438714419765777 ['ENSG00000100351|ENST00000344138|GRAP2', 'ENST00000461082.1_1_22:40343110-40343266:+|nuORF'] 65551 4685 LSGEDYRWWWR True NCI_RA007_Epitope_Rep3 1552.7211463268 1552.7194949037903 25.374 3 -0.2912756139736103 0.07328255297642684 0.9438714419765777 ['ENSG00000100926|ENST00000261789|TM9SF1'] 39612 8846 HPLLGVSA True PC9_epitope_Rep6 792.4493881678001 792.44828993586 43.959 2 -0.291292879068941 0.07328255297642684 0.9438714419765777 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 98614 12698 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.55090993586 53.899 2 -0.2913334549831465 0.07329927982239229 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 79481 11203 PGPSASSLL True PC9_epitope_Rep5 827.43888305375 827.43778993586 48.081 2 -0.29149366309022195 0.07334945673753746 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 126851 15029 VPTFEQLA True H1975_Epitope_Rep2 903.4701831820299 903.46908993586 62.962 2 -0.29150921636477645 0.07334945673753746 0.9438714419765777 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 19147 12784 ELISDDIRRY True H1975_Epitope_Rep1 1278.65681473474 1278.6557099358602 54.237 2 -0.29152869920028524 0.07334945673753746 0.9438714419765777 ['ENSG00000284395|ENST00000640283|PERCC1'] 115104 6295 TTVKNSSLL True PC9_epitope_Rep5 961.54441075145 961.54330993586 29.189 2 -0.2915985062318426 0.07338290499566849 0.9438714419765777 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 27552 13893 FPLATYAP True H1975_Epitope_Rep3 878.4538048419 878.4532549679301 58.75 1 -0.29160122194988775 0.07338290499566849 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C'] 105179 14399 STNKLTFMDL True PC9_epitope_Rep5 1168.579810284 1168.5787099358602 60.386 2 -0.29169402655367277 0.07341767582883647 0.9438714419765777 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1'] 68068 12188 LTNQQRYVL True PC9_epitope_Rep5 1133.61930702721 1133.61766490379 51.87 3 -0.29179879474617687 0.0734678409008879 0.9438714419765777 ['nc|ENSG00000091879|O15123-2|ANGPT2', 'ENSG00000091879|ENST00000629816|ANGPT2', 'nc|ENSG00000091879|O15123|ANGPT2'] 10334 15879 C[Carbamidomethyl]IESLIAVFQK True H1975_Epitope_Rep3 1306.6955090220097 1306.6944099358602 66.527 2 -0.2918276687370871 0.0734678409008879 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 44059 12702 ILLKAASQ True PC9_epitope_Rep2 842.52255310806 842.52144993586 54.164 2 -0.2918338677481961 0.0734678409008879 0.9438714419765777 ['ENSG00000144357|ENST00000272793|UBR3', 'nc|ENSG00000144357|Q6ZT12-4|UBR3'] 98355 6349 SIHENFSQA True PC9_epitope_Rep2 1031.4672230599099 1031.4661299358602 29.821 2 -0.29186432029751674 0.07350260769133597 0.9438714419765777 ['ENSG00000125633|ENST00000376300|CCDC93'] 15768 9876 EDENGDDQGF True PC9_epitope_Rep3 1124.3894262316796 1124.3883299358602 42.945 2 -0.291875760203483 0.07351800054136967 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000476241.2_2_1:245025757-245027609:-|nuORF'] 24195 19798 EYTSILHLF True PC9_epitope_Rep6 1121.57571087973 1121.57460993586 88.811 2 -0.2918762194742084 0.07351800054136967 0.9438714419765777 ['LRIG2|p.S985Pfs*4|1|0.18|ENSG00000198799|chr1:113119502-113119502|C/-|frameshift_variant', 'ENSG00000198799|ENST00000361127|LRIG2'] 27069 10789 FLPETEPP True PC9_epitope_Rep1 928.4541987647199 928.45310993586 46.388 2 -0.29189130189155726 0.07353339228034718 0.9438714419765777 ['SELPLG|p.E130Rfs*17|1|0.14|ENSG00000110876|chr12:108623890-108623920|CCGTGGGCACTGGTTGAGTGGTCTGTGCCTC/-|frameshift_variant', 'ENSG00000110876|ENST00000550948|SELPLG', 'nc|ENSG00000110876|Q14242-2|SELPLG'] 78042 5523 PALPPQAH True PC9_epitope_Rep3 829.44463714053 829.44354993586 26.324 2 -0.29192136952371445 0.07353339228034718 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 96013 6463 SEAGLAGAPA True H1975_Epitope_Rep2 842.4133965818999 842.41284496793 29.778 1 -0.2919669936811267 0.07354082092918358 0.9438714419765777 ['ENSG00000177879|ENST00000316788|AP3S1'] 69465 17279 LVSDSALYF True H1975_Epitope_Rep2 1013.50696261357 1013.50586993586 71.754 2 -0.2919747742423856 0.07354082092918358 0.9438714419765777 ['nc|ENSG00000211777|A0A0B4J244|TRAV3'] 115910 12000 TVPIYEGY True H1975_Epitope_Rep1 940.4541987647199 940.4536549679301 51.165 1 -0.2920004643002255 0.07354082092918358 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000415776.1_1_Y:19869357-19869702:-|nuORF', 'ACTG1|p.P172S|1|0.43|ENSG00000184009|chr17:81511476-81511476|G/A|missense_variant', 'ENST00000415794.1_1_3:139212993-139213512:+|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF'] 29144 5826 FTTTQGKA True NCI_RA007_Epitope_Rep2 852.4341320264798 852.43302993586 27.28 2 -0.29201757693861513 0.07354082092918358 0.9438714419765777 ['ENSG00000213967|ENST00000594466|ZNF726'] 46803 15951 IVDNTTMQL True PC9_epitope_Rep4 1033.51139637101 1033.51028993586 69.284 2 -0.2920327443731241 0.07354082092918358 0.9438714419765777 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G'] 41979 9841 IEDGGRYRDI True H1975_Epitope_Rep1 1192.58364979448 1192.58254993586 42.784 2 -0.2920979063652604 0.07354082092918358 0.9438714419765777 ['TOPORS|p.G873Vfs*29|1|0.11|ENSG00000197579|chr9:32541889-32541907|GTTGTATCAGTAGCTTTTC/-|frameshift_variant', 'nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 119656 7760 VESLELCMSP True H1975_Epitope_Rep3 1106.49878308198 1106.49768993586 34.833 2 -0.2920994779757356 0.07354082092918358 0.9438714419765777 ['ENST00000507587.1_1_5:176965994-176980212:-|nuORF'] 14214 8271 DSVEPVQGET True NCI_RA007_Epitope_Rep5 1059.4720336568298 1059.47092993586 38.492 2 -0.2921141242903867 0.07354082092918358 0.9438714419765777 ['nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENST00000446144.2_1_15:20773467-20778061:+|nuORF'] 78315 7750 PASPALTAA True PC9_epitope_Rep2 797.42831837005 797.4272299358599 35.185 2 -0.2921666027746514 0.07357557824847545 0.9438714419765777 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 35961 16825 GVATLGALL True H1975_Epitope_Rep1 813.4960040070499 813.4954549679301 70.127 1 -0.2922062308199389 0.0735922925649954 0.9438714419765777 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1-MLLT3|1|fusion', 'NBEAL1|p.R1792Gfs*10|1|0.22|ENSG00000144426|chr2:203149143-203149143|T/-|frameshift_variant'] 24806 4056 FCKWRTWKWKH True H1975_Epitope_Rep3 1604.8186926234398 1604.8170449037898 20.73 3 -0.29222384155454173 0.07360900627841524 0.9438714419765777 ['ENST00000379143.9_1_20:5098158-5098257:-|nuORF'] 60497 16310 LINIRVELS True PC9_epitope_Rep4 1055.63389446219 1055.63278993586 70.697 2 -0.292238691658883 0.0736243911239401 0.9438714419765777 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 78049 5130 PALPPQAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 26.395 2 -0.2922604514282444 0.0736243911239401 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 62748 12518 LLYVGSNDIQY True H1975_Epitope_Rep1 1283.63976768827 1283.6386699358602 53.193 2 -0.29230005879279125 0.07363446136084854 0.9438714419765777 ['CNR1|p.R186Afs*54|1|0.2|ENSG00000118432|chr6:88144719-88144719|G/-|frameshift_variant', 'CNR1|p.V291Tfs*15|1|0.35|ENSG00000118432|chr6:88144395-88144404|ACGCATACAC/-|frameshift_variant', 'ENSG00000118432|ENST00000369501|CNR1'] 14698 12821 DVPSPVRRTP True PC9_epitope_Rep3 1122.61455599994 1122.6134499358602 54.337 2 -0.29233528507855544 0.07363446136084854 0.9438714419765777 ['ENST00000273854.7_2_4:66468008-66535587:-|nuORF'] 68947 6770 LVFRNGDA True PC9_epitope_Rep2 890.4610154806599 890.45990993586 31.446 2 -0.2923410392821727 0.07363446136084854 0.9438714419765777 ['ENSG00000183066|ENST00000328823|WBP2NL'] 6427 9600 APSGNYVAC True PC9_epitope_Rep1 880.3749028981999 880.37435496793 41.782 1 -0.29234403151312943 0.07363446136084854 0.9438714419765777 ['ENSG00000114450|ENST00000232564|GNB4'] 87768 8907 QVGPEAGMQKV True PC9_epitope_Rep3 1142.5753936099 1142.5742899358602 39.212 2 -0.2923466112663484 0.07363446136084854 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 128459 5727 VSESGPVSP True H1975_Epitope_Rep3 857.4130622287299 857.41196993586 27.057 2 -0.29237440469657516 0.07363446136084854 0.9438714419765777 ['ENST00000369851.5_1_1:110091277-110091355:+|nuORF'] 98016 5968 SHSSSPTVL True PC9_epitope_Rep3 913.45051036661 913.44940993586 28.012 2 -0.2924351523425354 0.07365117160019481 0.9438714419765777 ['nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2'] 4599 15941 ALAEATVAL True PC9_epitope_Rep2 857.4858332461699 857.48472993586 66.566 2 -0.29253550858052857 0.07366788123669685 0.9438714419765777 ['ENSG00000085760|ENST00000263629|MTIF2'] 54738 4180 LAEMWLEKNDP True NCI_RA007_Epitope_Rep2 1344.6383877892797 1344.63673490379 20.898 3 -0.2925734088490123 0.07370262811378271 0.9438714419765777 ['ENSG00000131873|ENST00000254190|CHSY1', 'ENST00000543813.1_1_15:101717595-101728206:-|nuORF'] 126261 11075 VPHLLTEA True PC9_epitope_Rep1 878.48616759934 878.48506993586 47.488 2 -0.29257587427380194 0.07371800652946375 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 118764 17822 VEDSKPDTTAP True PC9_epitope_Rep3 1158.54044756982 1158.5393499358602 73.75 2 -0.2925907005388134 0.07371800652946375 0.9438714419765777 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 95923 7191 SDWADCKSP True H1975_Epitope_Rep3 1007.40184592203 1007.40074993586 32.636 2 -0.29274677393853743 0.07376945691971935 0.9438714419765777 ['nc|ENSG00000072694|P31994-5|FCGR2B', 'nc|ENSG00000072694|P31994-2|FCGR2B', 'nc|ENSG00000072694|P31994-3|FCGR2B', 'nc|ENSG00000072694|P31994-4|FCGR2B', 'ENSG00000072694|ENST00000358671|FCGR2B', 'ENST00000496692.6_1_1:161551173-161559386:+|nuORF', 'ENST00000466542.6_1_1:161551173-161559386:+|nuORF', 'ENST00000485778.1_1_1:161633004-161641486:+|nuORF', 'nc|ENSG00000244682|P31995-4|FCGR2C', 'ENST00000480308.5_1_1:161633004-161643868:+|nuORF', 'nc|ENSG00000244682|P31995-3|FCGR2C', 'nc|ENSG00000244682|P31995-2|FCGR2C', 'nc|ENSG00000244682|P31995|FCGR2C'] 69763 18736 LWLPGRFQP True PC9_epitope_Rep6 1112.61309944796 1112.6120099358602 84.709 2 -0.29286309062944077 0.07376945691971935 0.9438714419765777 ['ENST00000532885.5_1_11:64128013-64135652:+|nuORF'] 132343 12715 VYLQEGKVI True NCI_RA007_Epitope_Rep4 1047.59644632431 1047.5953499358602 55.962 2 -0.2928676505910925 0.07378483181531247 0.9438714419765777 ['ENSG00000134020|ENST00000256404|PEBP4'] 68344 5693 LTSEPPPRWAR True H1975_Epitope_Rep3 1308.6938689498 1308.69223490379 26.928 3 -0.2929050496272331 0.07378483181531247 0.9438714419765777 ['ENSG00000284024|ENST00000640019|MSANTD7'] 66933 9759 LSYINTSADP True H1975_Epitope_Rep2 1079.51350454599 1079.5124099358602 42.528 2 -0.2929239853529856 0.0737935511793984 0.9438714419765777 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 7087 6508 AQYDRQIRL True NCI_RA007_Epitope_Rep3 1161.6254550368099 1161.62380490379 32.638 3 -0.2930045796564389 0.0737935511793984 0.9438714419765777 ['ENST00000600753.1_1_19:47634148-47653459:+|nuORF', 'nc|ENSG00000142230|Q9UBE0-2|SAE1', 'nc|ENSG00000142230|Q9UBE0-3|SAE1', 'ENSG00000142230|ENST00000270225|SAE1'] 122243 8747 VGRQPFVL True NCI_RA007_Epitope_Rep4 914.5337864980999 914.53268993586 40.443 2 -0.29301404156840605 0.0737935511793984 0.9438714419765777 ['ENST00000527132.1_1_11:11985552-11985876:-|nuORF'] 43987 11886 ILGVDDEVL True PC9_epitope_Rep1 971.51752729727 971.51642993586 50.585 2 -0.29302514068474056 0.0737935511793984 0.9438714419765777 ['nc|ENSG00000119725|Q86VK4-4|ZNF410', 'ENSG00000119725|ENST00000555044|ZNF410', 'nc|ENSG00000119725|Q86VK4-5|ZNF410'] 31869 6354 GEQEGAMVAA True NCI_RA007_Epitope_Rep4 961.4174959861698 961.41638993586 31.047 2 -0.2930563765617292 0.0737935511793984 0.9438714419765777 ['nc|ENSG00000138668|Q14103-4|HNRNPD', 'nc|ENSG00000138668|Q14103-3|HNRNPD', 'nc|ENSG00000138668|Q14103-2|HNRNPD', 'ENSG00000138668|ENST00000313899|HNRNPD', 'HNRNPD|p.G139Vfs*13|1|0.43|ENSG00000138668|chr4:82359514-82359514|C/-|frameshift_variant'] 2168 8600 AEMPADSGYPA True H1975_Epitope_Rep2 1107.45427541771 1107.45377496793 38.034 1 -0.29306092461786326 0.0737935511793984 0.9438714419765777 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 104157 12479 SSAPGLTSV True PC9_epitope_Rep3 817.4181476091701 817.4175949679301 53.026 1 -0.2930926934337482 0.0737935511793984 0.9438714419765777 ['ENSG00000115216|ENST00000379852|NRBP1'] 105419 7034 [Acetylation]-SVAGGEIR True H1975_Epitope_Rep3 829.42938131551 829.42883496793 32.021 1 -0.29314734786706204 0.0738102537283826 0.9438714419765777 ['ENST00000565758.1_1_16:30441199-30441310:-|nuORF', 'ENSG00000179958|ENST00000319285|DCTPP1'] 108568 9328 TEHFLTAVA True H1975_Epitope_Rep2 987.5025459394699 987.50144993586 40.841 2 -0.29316658901628434 0.07382562438012803 0.9438714419765777 ['ENSG00000130119|ENST00000360845|GNL3L'] 122611 20909 VGTLCAIAGV True PC9_epitope_Rep3 902.4895387276199 902.48844993586 85.702 2 -0.2931819545261588 0.07382562438012803 0.9438714419765777 ['ENSG00000143105|ENST00000369771|KCNA10'] 75546 8525 NQLKERSL True PC9_epitope_Rep2 986.5508931142199 986.54978993586 38.155 2 -0.2932364963200389 0.07384099392321979 0.9438714419765777 ['NLRP14|p.F229L|2|0.13|ENSG00000158077|chr11:7042711-7042711|T/C|missense_variant'] 66198 8030 LSPLRDTPP True H1975_Epitope_Rep3 994.5447451046199 994.54364993586 35.86 2 -0.2932442625409371 0.07384099392321979 0.9438714419765777 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'ENST00000503369.1_1_4:88036121-88046296:+|nuORF'] 44160 22375 ILQFQFAEV True PC9_epitope_Rep5 1093.5807962601698 1093.5796899358602 91.077 2 -0.29333031602957466 0.07385636235777782 0.9438714419765777 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1'] 123734 13358 VIRDKDYHL True PC9_epitope_Rep5 1157.61930702721 1157.61766490379 56.395 3 -0.2933361769834823 0.07385636235777782 0.9438714419765777 ['ENSG00000046889|ENST00000288368|PREX2', 'ENST00000517617.1_1_8:68864752-69023167:+|nuORF', 'nc|ENSG00000046889|Q70Z35-3|PREX2', 'ENST00000529398.5_1_8:68864629-69017594:+|nuORF', 'nc|ENSG00000046889|Q70Z35-4|PREX2'] 75326 21639 NPYTLFVLV True PC9_epitope_Rep6 1064.5906326678798 1064.59007496793 96.119 1 -0.2933893432920209 0.0738664022356441 0.9438714419765777 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L'] 55788 8125 LDEIDEAR True PC9_epitope_Rep2 959.45598966987 959.45488993586 36.611 2 -0.29340982589562664 0.0738664022356441 0.9438714419765777 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5'] 56726 19016 LEAHVGIGVI True PC9_epitope_Rep3 1006.5811306133398 1006.58002993586 78.367 2 -0.2934141644685421 0.0738664022356441 0.9438714419765777 ['ATP11A-CUL4A|2|fusion', 'ATP11A|p.R1107Sfs*4|1|0.16|ENSG00000068650|chr13:112875929-112875930|AG/-|frameshift_variant', 'TFDP1-ATP11A|2|fusion', 'ENSG00000068650|ENST00000375645|ATP11A', 'TFDP1-ATP11A|1|fusion'] 2726 9015 AETSPAPIP True H1975_Epitope_Rep1 881.44944773745 881.4488949679301 39.581 1 -0.29348148036996313 0.0738664022356441 0.9438714419765777 ['ENSG00000153395|ENST00000283415|LPCAT1', 'ENST00000503252.1_1_5:1463768-1467406:-|nuORF'] 98680 13385 SIQLHLAV True PC9_epitope_Rep6 879.5178020807899 879.5172549679301 63.156 1 -0.29350602505619744 0.0738664022356441 0.9438714419765777 ['ZNF521|p.L1033Wfs*49|1|0.18|ENSG00000198795|chr18:25224820-25224820|A/-|frameshift_variant', 'ENSG00000198795|ENST00000361524|ZNF521'] 39892 3595 HQIWHHSFY True NCI_RA007_Epitope_Rep2 1253.57302554113 1253.57192993586 18.634 2 -0.29354863160269645 0.0738664022356441 0.9438714419765777 ['nc|ENSG00000163017|P63267-2|ACTG2'] 81858 6556 PSIIIRRLDY True NCI_RA007_Epitope_Rep5 1244.72410644892 1244.72245490379 31.879 3 -0.2936850718171678 0.073937186745033 0.9438714419765777 ['ENST00000260570.7_1_2:27676255-27679405:-|nuORF'] 80867 16548 PLVPTASENCP True H1975_Epitope_Rep2 1126.53286009158 1126.5317699358602 68.877 2 -0.2937080199829087 0.07395254921756689 0.9438714419765777 ['ENSG00000196531|ENST00000454682|NACA'] 56732 6859 LEAKQEKSTY True H1975_Epitope_Rep3 1195.60846755999 1195.60736993586 31.341 2 -0.2937723183905272 0.07395254921756689 0.9438714419765777 ['ENST00000440243.2_1_X:102342330-102342555:+|nuORF'] 84455 9823 QGLADNTVI True NCI_RA007_Epitope_Rep3 929.48181049489 929.48070993586 45.713 2 -0.2938043082774108 0.07396924408228019 0.9438714419765777 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 114263 17482 TSAESFVNV True PC9_epitope_Rep3 952.45017601344 952.44906993586 72.422 2 -0.29384164667877266 0.074002632005913 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 125555 17230 VLYCLAFVL True PC9_epitope_Rep6 1039.5776254560299 1039.5765299358602 78.871 2 -0.2938893998338535 0.074002632005913 0.9438714419765777 ['ENSG00000183671|ENST00000621141|CMKLR2'] 67636 17880 LTFAAERFCRL True PC9_epitope_Rep1 1325.69142642165 1325.68978490379 73.568 3 -0.29399958870942866 0.07405137449301487 0.9438714419765777 ['ENST00000578562.6_1_18:3252236-3252314:+|nuORF'] 124078 18238 VKRRRRWYFRV True NCI_RA007_Epitope_Rep5 1620.9589660370798 1620.9578699358601 76.959 2 -0.29403628366657775 0.07405137449301487 0.9438714419765777 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 11851 4078 DHNDGLGNAF True NCI_RA007_Epitope_Rep3 1058.44173658806 1058.4406299358602 22.551 2 -0.29404793698669973 0.07405137449301487 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 48981 8292 KFDFSDEEIMA True NCI_RA007_Epitope_Rep2 1330.57511882638 1330.5740299358602 36.893 2 -0.2941314747551616 0.07405137449301487 0.9438714419765777 ['ENSG00000038532|ENST00000409790|CLEC16A', 'nc|ENSG00000038532|Q2KHT3-2|CLEC16A', 'CLEC16A|p.F169Cfs*14|1|0.25|ENSG00000038532|chr16:10971137-10971138|TT/-|frameshift_variant'] 113460 11081 TQQLQDISSML True NCI_RA007_Epitope_Rep1 1262.6176523447 1262.6165499358601 47.099 2 -0.29418828157806604 0.07408609128271686 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 85737 4245 QLTVHHRPPQ True NCI_RA007_Epitope_Rep2 1211.65233849099 1211.65069490379 21.151 3 -0.294274673845379 0.07411947078121058 0.9438714419765777 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP'] 58004 8734 LERARRPGP True H1975_Epitope_Rep3 1050.6046600225798 1050.6035699358602 38.599 2 -0.2942861279489246 0.07411947078121058 0.9438714419765777 ['ENST00000216452.8_1_14:68066909-68066996:-|nuORF'] 67862 15361 LTKEQESL True PC9_epitope_Rep1 946.4971262058599 946.49602993586 63.903 2 -0.29438213858103823 0.07416953551666336 0.9438714419765777 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 129459 13609 VTENALKDL True PC9_epitope_Rep3 1001.5393253710099 1001.53822993586 57.411 2 -0.29442160895865244 0.07416953551666336 0.9438714419765777 ['ENSG00000131409|ENST00000652263|LRRC4B'] 139869 20706 YVDPVITSI True PC9_epitope_Rep5 1005.53826274185 1005.53767496793 84.703 1 -0.29443327947798426 0.07416953551666336 0.9438714419765777 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 110251 16648 TIETYKNIESY True H1975_Epitope_Rep2 1359.6558116752299 1359.6547099358602 69.267 2 -0.2944471185035729 0.07418221140848878 0.9438714419765777 ['nc|ENSG00000147650|Q9Y561-2|LRP12', 'ENSG00000147650|ENST00000276654|LRP12', 'LRP12|p.E379Kfs*109|1|0.3|ENSG00000147650|chr8:104497417-104497417|C/-|frameshift_variant'] 136490 10985 YHIQQNEALAA True PC9_epitope_Rep1 1256.6149499227602 1256.6138499358601 47.144 2 -0.2944668000796921 0.07418221140848878 0.9438714419765777 ['ENSG00000100575|ENST00000395159|TIMM9'] 133918 15379 WNPRRWWRWCW True NCI_RA007_Epitope_Rep2 1730.8153385785 1730.81424993586 64.519 2 -0.29446713631099347 0.07418221140848878 0.9438714419765777 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 57632 7455 LELSDVHRETT True H1975_Epitope_Rep1 1298.64664397386 1298.6455499358601 33.673 2 -0.29446754134653264 0.07418221140848878 0.9438714419765777 ['ENSG00000004142|ENST00000540200|POLDIP2'] 27311 6568 FM[Oxidation]C[Carbamidomethyl]QGGDFTR True NCI_RA007_Epitope_Rep2 1233.4906786696397 1233.48958993586 30.16 2 -0.29458581559472957 0.0742336042676663 0.9438714419765777 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000289549|F5H284|PPIAL4D', 'ENSG00000279782|ENST00000581138|PPIAL4F', 'ENSG00000271567|ENST00000581164|PPIAL4E', 'ENST00000428093.1_1_2:68352508-68352655:+|nuORF', 'nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C', 'ENSG00000270339|ENST00000584068|PPIAL4H', 'ENSG00000263353|ENST00000577856|PPIAL4A'] 13389 7454 DNIQTVKRLRT True NCI_RA007_Epitope_Rep1 1342.7680965192199 1342.76698993586 32.992 2 -0.29459549057232953 0.0742336042676663 0.9438714419765777 98811 16212 SITKGVIYI True PC9_epitope_Rep5 992.5906326678798 992.58952993586 67.352 2 -0.29464799553684434 0.07424627417058623 0.9438714419765777 ['nc|ENSG00000123901|Q9NYM4-2|GPR83', 'ENSG00000123901|ENST00000243673|GPR83'] 88023 14945 QVSQIYQSI True PC9_epitope_Rep4 1064.55022440788 1064.54912993586 65.426 2 -0.29475758028926824 0.07424627417058623 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF', 'ENST00000462527.2_1_10:120819077-120819266:-|nuORF'] 58710 15176 LFKRFWWRHYQ True NCI_RA007_Epitope_Rep1 1665.8680853440098 1665.8669899358601 63.102 2 -0.29479401559269924 0.07424627417058623 0.9438714419765777 ['ENST00000354179.8_2_5:176671236-176673694:+|nuORF'] 45984 9248 ISSYSLEH True H1975_Epitope_Rep2 934.43961132974 934.43850993586 40.529 2 -0.29484760953968003 0.07424627417058623 0.9438714419765777 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159681329-159707642:-|nuORF'] 57327 10649 LEGQQQSL True PC9_epitope_Rep5 901.4505103666099 901.44940993586 45.949 2 -0.2948875900453517 0.07428097743818929 0.9438714419765777 ['nc|ENSG00000196091|Q00872-5|MYBPC1', 'nc|ENSG00000196091|Q00872-9|MYBPC1', 'nc|ENSG00000196091|Q00872-8|MYBPC1', 'nc|ENSG00000196091|Q00872-10|MYBPC1', 'ENSG00000196091|ENST00000361466|MYBPC1'] 107348 7103 SYRRNDYRRDR True NCI_RA007_Epitope_Rep1 1555.7716187598699 1555.76998490379 31.623 3 -0.29497761195199484 0.07429632032291779 0.9438714419765777 ['CLK2|p.S83R|1|0.19|ENSG00000176444|chr1:155269638-155269638|G/T|missense_variant'] 10804 7817 DAEVSAVRLK True H1975_Epitope_Rep3 1086.6033226098998 1086.6022299358601 35.051 2 -0.2949845246487901 0.07429632032291779 0.9438714419765777 ['ENSG00000274443|ENST00000624510|C8orf89'] 109557 4610 THAPATLEA True PC9_epitope_Rep6 909.45559574705 909.45448993586 25.033 2 -0.29499509895954124 0.07430764518279609 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'nc|ENSG00000100591|O95433-2|AHSA1', 'ENST00000555457.5_1_14:77928552-77935440:+|nuORF'] 74409 23342 NIVEHRENFG True PC9_epitope_Rep2 1213.5839841476497 1213.58288993586 95.26 2 -0.2950077198227829 0.07430764518279609 0.9438714419765777 ['nc|ENSG00000172171|Q96QE5-4|TEFM', 'ENSG00000172171|ENST00000581216|TEFM'] 77675 4324 PAAAAAQEP True NCI_RA007_Epitope_Rep4 824.4028318981999 824.4022849679301 22.975 1 -0.2950475780136827 0.07430764518279609 0.9438714419765777 ['ENST00000458407.1_1_2:133110346-133110880:+|nuORF'] 15553 8050 EASQELLAQ True H1975_Epitope_Rep2 987.4872897981497 987.48618993586 35.913 2 -0.2950961293381832 0.07430764518279609 0.9438714419765777 ['ENSG00000182179|ENST00000333486|UBA7'] 101753 7396 SPHLPGTSSA True PC9_epitope_Rep1 952.46140940348 952.46030993586 33.262 2 -0.29515256480865526 0.07430764518279609 0.9438714419765777 ['ENSG00000171456|ENST00000375687|ASXL1', 'ASXL1|p.G646Wfs*12|1|0.34|ENSG00000171456|chr20:32434638-32434639|-/G|frameshift_variant', 'ASXL1|p.T613Pfs*90|1|0.39|ENSG00000171456|chr20:32434547-32434547|G/-|frameshift_variant'] 99646 4582 SLFWLFIT True NCI_RA007_Epitope_Rep5 1025.5586042636098 1025.55750993586 24.286 2 -0.29523056834116884 0.07436036036036037 0.9438714419765777 ['ENST00000430297.6_2_2:220048236-220048374:+|nuORF'] 63903 20550 LPVSPSLLPV True PC9_epitope_Rep3 1020.62193279616 1020.62082993586 84.309 2 -0.29529755133630864 0.07441307363831283 0.9438714419765777 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 25796 8606 FFYFFMEHWIP True NCI_RA007_Epitope_Rep1 1562.7056795034598 1562.7040349037902 37.477 3 -0.295364177906128 0.07444642631929806 0.9438714419765777 ['ENSG00000176894|ENST00000317479|PXMP2'] 4635 11895 ALASHLIEA True PC9_epitope_Rep2 923.5076313199099 923.50652993586 51.079 2 -0.29541629700046806 0.07444642631929806 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 73495 8829 NEYRKRFMLKP True NCI_RA007_Epitope_Rep1 1480.7972884725195 1480.7956349037902 38.343 3 -0.29545187347718493 0.07446041869347458 0.9438714419765777 ['ENSG00000073756|ENST00000367468|PTGS2'] 27380 7029 FMRSKRAADF True PC9_epitope_Rep2 1227.61826148139 1227.6166049037902 32.439 3 -0.2954573600565581 0.07446041869347458 0.9438714419765777 ['ENSG00000268009|ENST00000595689|SSX4', 'ENSG00000269791|ENST00000595235|SSX4B', 'nc|ENSG00000269791|O60224-2|SSX4'] 25589 5998 FESTSGVSA True H1975_Epitope_Rep2 883.3923267841499 883.39177496793 28.051 1 -0.29549617233055225 0.07446041869347458 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 69328 21691 LVPRFQVIL True PC9_epitope_Rep2 1083.68045073179 1083.67934993586 88.912 2 -0.29551643591889826 0.07447709297926387 0.9438714419765777 ['ENST00000372070.7_1_1:46016813-46018162:+|nuORF'] 123676 6503 VINSVDIK True NCI_RA007_Epitope_Rep2 886.5123823471799 886.51128993586 29.904 2 -0.29559398358319067 0.07451178208546516 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant'] 38067 5362 HEM[Oxidation]FPAVHAA True H1975_Epitope_Rep2 1124.50731443052 1124.5062099358602 25.669 2 -0.2956170752745817 0.07452845484516024 0.9438714419765777 ['ENSG00000113638|ENST00000337702|TTC33'] 5582 15898 ANSSQANDCL True PC9_epitope_Rep5 1021.4134732348899 1021.4123699358599 66.142 2 -0.29577288928230017 0.07458115654836966 0.9438714419765777 ['nc|ENSG00000291164|Q6ZMU1|C3P1'] 66533 13231 LSSGHSSYAI True PC9_epitope_Rep3 1020.4876241513199 1020.48652993586 55.927 2 -0.29603801896216914 0.07463385635279494 0.9438714419765777 ['nc|ENSG00000211637|A0A075B6H9|IGLV4-69'] 30477 11821 GAGLLISSLL True NCI_RA007_Epitope_Rep5 942.5749826037401 942.57388993586 52.127 2 -0.2960822494835207 0.07465052601239372 0.9438714419765777 ['ENSG00000112337|ENST00000377850|SLC17A2', 'nc|ENSG00000112337|O00624|SLC17A2', 'nc|ENSG00000112337|O00624-2|SLC17A2'] 67902 23271 LTKWPKFFF True PC9_epitope_Rep4 1212.6695516949196 1212.66790490379 97.764 3 -0.2961402318587904 0.0746671950714247 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'XPOT|p.D127G|1|0.33|ENSG00000184575|chr12:64418985-64418985|A/G|missense_variant'] 88450 9903 QYVDFHNQL True NCI_RA007_Epitope_Rep3 1162.54072235334 1162.5396299358601 46.035 2 -0.29632423213993936 0.0747198904780776 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5', 'nc|ENSG00000134899|P28715-2|ERCC5'] 81869 10190 PSKTIPGL True PC9_epitope_Rep4 811.4803539429099 811.47924993586 46.873 2 -0.29641558365135234 0.07475187780319542 0.9438714419765777 ['ENST00000399878.7_2_4:25750095-25759376:-|nuORF'] 41050 15581 HYILHNSFF True PC9_epitope_Rep6 1176.5716285587998 1176.5705299358601 72.142 2 -0.2964306797809051 0.07475187780319542 0.9438714419765777 ['ENSG00000163659|ENST00000295924|TIPARP'] 44290 6699 ILWEEERAERR True NCI_RA007_Epitope_Rep2 1485.7688247952099 1485.76717490379 30.671 3 -0.29645296031742835 0.07475187780319542 0.9438714419765777 ['nc|ENSG00000155275|Q8IYL2-2|TRMT44', 'ENSG00000155275|ENST00000389737|TRMT44'] 95662 11307 SAVQVLGVP True H1975_Epitope_Rep1 868.5018176634799 868.5012649679301 48.47 1 -0.2964803231409529 0.07476854353542996 0.9438714419765777 ['ENSG00000105641|ENST00000222248|SLC5A5'] 70282 17359 LYPDHFHLL True PC9_epitope_Rep4 1153.59202965021 1153.5903749037902 74.775 3 -0.29663658169248447 0.07480052592712667 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 13232 11439 DLTSEHPLLE True H1975_Epitope_Rep2 1152.56626839484 1152.56516993586 49.052 2 -0.2966477616534892 0.07480052592712667 0.9438714419765777 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3'] 48195 11253 KAWEWRYRLYR True H1975_Epitope_Rep3 1625.8579145831297 1625.8568099358602 48.387 2 -0.2967313411039658 0.07480052592712667 0.9438714419765777 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 75008 19576 NLYTDIINI True PC9_epitope_Rep5 1077.57062549929 1077.5695299358601 80.351 2 -0.29713230017698644 0.07494326573250243 0.9438714419765777 ['ENST00000533377.1_1_8:145066406-145067006:+|nuORF', 'ENSG00000178719|ENST00000395068|GRINA'] 96993 11761 SEVM[Oxidation]EELEKVK True NCI_RA007_Epitope_Rep2 1335.6591831839498 1335.65808993586 50.346 2 -0.29716964246453936 0.074993246285457 0.9438714419765777 ['ENSG00000114446|ENST00000264538|IFT57'] 75426 17394 NQFQGKWYV True PC9_epitope_Rep3 1168.5665431783598 1168.5654499358602 72.075 2 -0.29717234682497784 0.074993246285457 0.9438714419765777 ['nc|ENSG00000148346|P80188-2|LCN2', 'ENSG00000148346|ENST00000277480|LCN2', 'LCN2|p.G110Wfs*10|1|0.27|ENSG00000148346|chr9:128151689-128151701|CGGCGAGTTCACG/-|frameshift_variant'] 97829 13613 SHIGDAVVI True PC9_epitope_Rep5 909.49198125577 909.4914349679301 57.385 1 -0.29718053095978475 0.074993246285457 0.9438714419765777 ['ENSG00000132646|ENST00000379143|PCNA', 'PCNA|p.C162Y|1|0.34|ENSG00000132646|chr20:5117567-5117567|C/T|missense_variant'] 16528 12437 EEPSQLEEL True PC9_epitope_Rep1 1072.49243474824 1072.4913299358602 52.703 2 -0.29727600346565014 0.07502251035476319 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 2570 5669 AERRRWYIEQP True H1975_Epitope_Rep1 1502.77424452882 1502.7725849037902 26.875 3 -0.2973065038629207 0.07502251035476319 0.9438714419765777 ['ENST00000526132.5_1_1:52522019-52530572:+|nuORF'] 72681 23720 MYIIPVVLF True PC9_epitope_Rep4 1093.6245756484498 1093.6234699358602 99.601 2 -0.2973378190580059 0.07502251035476319 0.9438714419765777 ['ENSG00000161671|ENST00000334976|EMC10'] 114198 15285 TRVDPLTL True PC9_epitope_Rep1 913.5232813840499 913.52218993586 63.616 2 -0.2973416628600843 0.07502251035476319 0.9438714419765777 ['ENSG00000100065|ENST00000251973|CARD10', 'nc|ENSG00000100065|Q9BWT7-2|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF'] 125126 12655 VLPNRPFGLF True NCI_RA007_Epitope_Rep5 1158.6549642599398 1158.65386993586 55.332 2 -0.2973877213051355 0.07502251035476319 0.9438714419765777 ['ENSG00000005187|ENST00000289416|ACSM3'] 106303 23601 SVRKRRVRK True NCI_RA007_Epitope_Rep1 1183.7737910363496 1183.7726899358602 97.345 2 -0.29746237008133186 0.07503916731195188 0.9438714419765777 ['nc|ENSG00000153132|O14967-2|CLGN', 'ENSG00000153132|ENST00000325617|CLGN'] 9056 21835 AVITGFFTV True PC9_epitope_Rep4 953.5222187548899 953.52112993586 92.19 2 -0.29749805162226045 0.0750738313044731 0.9438714419765777 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 119604 12259 VERSTDQVI True PC9_epitope_Rep1 1045.54038800017 1045.53928993586 52.014 2 -0.2975211599140398 0.07508913458421868 0.9438714419765777 ['ENSG00000169902|ENST00000304842|TPST1'] 30853 6644 GAQSLQREL True NCI_RA007_Epitope_Rep3 1000.53015766964 1000.52906993586 33.201 2 -0.2975235256371634 0.07508913458421868 0.9438714419765777 ['ENST00000479606.5_1_22:21351676-21351817:+|nuORF'] 67831 20431 LTIGKCIYLF True PC9_epitope_Rep3 1169.65185302545 1169.6507499358602 83.842 2 -0.29766631303698615 0.07510578914198253 0.9438714419765777 ['ENST00000485996.1_1_14:21944657-21945031:-|nuORF'] 59320 4184 LGIHEDSTNR True PC9_epitope_Rep3 1140.5523496662001 1140.5506949037901 21.209 3 -0.29773280628328974 0.07511973783715654 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 107982 17579 TCMSLASQVV True PC9_epitope_Rep6 1037.48855275145 1037.48744993586 80.257 2 -0.2977401663527633 0.07511973783715654 0.9438714419765777 ['ENSG00000064692|ENST00000261368|SNCAIP', 'nc|ENSG00000064692|Q9Y6H5-3|SNCAIP', 'nc|ENSG00000064692|Q9Y6H5-5|SNCAIP', 'ENST00000512146.6_1_5:121736783-121799188:+|nuORF', 'nc|ENSG00000064692|Q9Y6H5-2|SNCAIP', 'nc|ENSG00000064692|Q9Y6H5-4|SNCAIP'] 32226 12414 GFGGAALL True H1975_Epitope_Rep1 704.38572528208 704.3851749679301 52.784 1 -0.297762615223273 0.07511973783715654 0.9438714419765777 ['ENST00000366663.9_1_1:230972959-230973187:-|nuORF'] 81218 16619 PPLPLPPPP True PC9_epitope_Rep6 923.5480395799099 923.54694993586 76.388 2 -0.2977951056386473 0.07513368502547667 0.9438714419765777 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'MAMLD1|p.P359L|1|0.23|ENSG00000013619|chrX:150470649-150470649|C/T|missense_variant', 'ENSG00000188493|ENST00000378313|ACTMAP'] 130506 18646 VTVVFENNDL True PC9_epitope_Rep6 1148.57135377528 1148.5702499358601 84.365 2 -0.2978221211147245 0.07513368502547667 0.9438714419765777 ['nc|ENSG00000172717|Q8N9W8-2|GARIN2', 'ENSG00000172717|ENST00000696955|GARIN2', 'nc|ENSG00000172717|Q8N9W8|GARIN2'] 118223 13407 VAYILYRRYRE True H1975_Epitope_Rep1 1500.82013209208 1500.81847490379 56.683 3 -0.29785520266548654 0.07513368502547667 0.9438714419765777 ['ENST00000486986.6_1_1:151752280-151755498:-|nuORF', 'nc|ENSG00000182134|Q9Y2W6-3|TDRKH', 'ENSG00000182134|ENST00000368824|TDRKH', 'ENST00000463553.1_1_1:151755369-151755498:-|nuORF'] 107901 11125 TAVERLKE True PC9_epitope_Rep4 944.5290950404799 944.52798993586 50.569 2 -0.29798012280129077 0.07516834107522236 0.9438714419765777 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 46135 7568 ITAPPGTAA True PC9_epitope_Rep2 797.42831837005 797.4272299358599 34.481 2 -0.2980507124477662 0.07518499180814864 0.9438714419765777 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 135000 11344 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.38026993586 48.513 2 -0.2981853947609819 0.07520164194152383 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 30086 13634 FYNPAVSRI True PC9_epitope_Rep4 1065.56072952193 1065.5596299358601 60.335 2 -0.2983127530956159 0.0752723017373301 0.9438714419765777 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 71405 22661 MIIPSLEEL True PC9_epitope_Rep2 1043.5572839342701 1043.5567749679299 92.661 1 -0.2983703231874907 0.07528894969934828 0.9438714419765777 ['NUSAP1-RTF1|1|fusion', 'ENST00000558123.5_1_15:41625155-41634596:+|nuORF', 'nc|ENSG00000137804|Q9BXS6-7|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-4|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-6|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-3|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-5|NUSAP1', 'nc|ENSG00000137804|Q9BXS6-2|NUSAP1', 'ENSG00000137804|ENST00000559596|NUSAP1'] 80507 24560 PLLLLCVAL True PC9_epitope_Rep1 953.5983609006099 953.59726993586 99.33 2 -0.2984435106559758 0.07530017461431837 0.9438714419765777 ['ENSG00000187944|ENST00000342506|C2orf66', 'nc|nan|Q6UXQ4|C2orf66'] 1412 8498 AEEGFTQVT True H1975_Epitope_Rep2 980.4450906329998 980.44398993586 37.642 2 -0.2984471291236436 0.07530017461431837 0.9438714419765777 ['ENSG00000115946|ENST00000263657|PNO1'] 66776 19033 LSVAVGSIVDL True PC9_epitope_Rep2 1071.61757569171 1071.61646993586 78.575 2 -0.29845212900541773 0.07530017461431837 0.9438714419765777 ['nc|ENSG00000008083|Q92833-2|JARID2'] 816 11345 ADATALTLA True NCI_RA007_Epitope_Rep3 845.44944773745 845.4488949679301 51.74 1 -0.2984923262510356 0.07530017461431837 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 66884 11596 LSWMAEPWVP True H1975_Epitope_Rep2 1214.57941636118 1214.57830993586 49.671 2 -0.29850515442334913 0.07530017461431837 0.9438714419765777 ['ENST00000370801.7_1_1:78107323-78148330:-|nuORF'] 89924 12345 RFVEKYTEL True PC9_epitope_Rep2 1183.62372370131 1183.62208490379 52.795 3 -0.298531094227826 0.07533482142857142 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 42863 4180 IFQLDERRRD True NCI_RA007_Epitope_Rep2 1346.7054962626598 1346.70385490379 20.898 3 -0.2986099054162826 0.07534604100293392 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 4452 7440 AKAGGLLQ True NCI_RA007_Epitope_Rep4 756.4493881678 756.44828993586 35.262 2 -0.29865610512952445 0.07534604100293392 0.9438714419765777 ['nc|ENSG00000142405|P59046-5|NLRP12'] 102785 5991 SQESFTEGL True PC9_epitope_Rep5 996.4400052525599 996.43890993586 28.039 2 -0.2986730128033351 0.07534604100293392 0.9438714419765777 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.P1652Rfs*13|1|0.38|ENSG00000042781|chr1:216086751-216086751|G/-|frameshift_variant'] 100903 8956 SLSKVEVNELK True NCI_RA007_Epitope_Rep3 1244.6976169175598 1244.6965099358601 42.322 2 -0.2986804935167629 0.07534604100293392 0.9438714419765777 ['ENSG00000198707|ENST00000552810|CEP290'] 82808 19254 PVSHPVLTL True PC9_epitope_Rep1 961.55966689277 961.55856993586 78.86 2 -0.29868752267335924 0.07534604100293392 0.9438714419765777 ['nc|ENSG00000143297|Q96RD9-4|FCRL5', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'ENST00000449287.1_1_1:157606263-157609923:-|nuORF'] 66442 10118 LSRPLSQAV True PC9_epitope_Rep2 969.5607295219299 969.55962993586 44.257 2 -0.29869716648079997 0.07536268404190216 0.9438714419765777 ['ENSG00000076826|ENST00000160298|CAMSAP3', 'nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3'] 27419 14197 FNGLFSRLRD True PC9_epitope_Rep1 1223.64110510095 1223.64000993586 59.431 2 -0.2987490058032824 0.075376613091917 0.9438714419765777 ['ENST00000471717.1_1_7:99772169-99774834:-|nuORF', 'ENSG00000213420|ENST00000292377|GPC2'] 9180 17919 AVPDEIPPLE True PC9_epitope_Rep6 1078.55464108198 1078.55354993586 81.55 2 -0.2988192971699592 0.075376613091917 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF'] 77517 17139 NYQGHFHLF True PC9_epitope_Rep5 1161.5355774032498 1161.5344899358602 70.946 2 -0.29886133292248723 0.075376613091917 0.9438714419765777 ['ENST00000283632.4_1_2:86968058-86968091:+|nuORF'] 63433 12070 LPGRSDVLV True PC9_epitope_Rep2 954.5498304850599 954.54872993586 51.74 2 -0.2989289013232225 0.07539325438249163 0.9438714419765777 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 61256 11065 LLDRQILAA True PC9_epitope_Rep2 1011.6076797143498 1011.60658993586 47.879 2 -0.2990213182317673 0.07546252969548628 0.9438714419765777 ['ENSG00000178951|ENST00000322357|ZBTB7A'] 46017 4462 ISVEMDVTK True NCI_RA007_Epitope_Rep5 1020.5161473982799 1020.51504993586 23.809 2 -0.29902604595562066 0.07546252969548628 0.9438714419765777 ['ENSG00000277586|ENST00000610854|NEFL'] 124789 22251 VLLCGCPV True H1975_Epitope_Rep3 802.40811760278 802.40700993586 93.053 2 -0.299140779330997 0.07556915324394853 0.9438714419765777 ['ENST00000378536.4_1_1:2240087-2240159:+|nuORF'] 87181 19100 QSLEYLEQV True PC9_epitope_Rep4 1107.54480467427 1107.54427496793 81.56 1 -0.29917644501773005 0.07558306939245608 0.9438714419765777 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 114260 16930 TSAESFVNV True PC9_epitope_Rep2 952.45017601344 952.44906993586 70.364 2 -0.29917902252757206 0.07558306939245608 0.9438714419765777 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 75173 19009 NNLKCKWAKCP True PC9_epitope_Rep3 1303.6529327379499 1303.6518299358602 78.339 2 -0.29921564003511436 0.07558306939245608 0.9438714419765777 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|146|3|sense'] 117882 8026 VAPRRGWV True PC9_epitope_Rep4 939.5402688608698 939.53916993586 38.321 2 -0.29925890878919736 0.07559698403843731 0.9438714419765777 ['ENST00000311417.6_1_3:178785505-178789764:-|nuORF'] 120043 10663 VFEQEAKKV True PC9_epitope_Rep6 1076.5866099165999 1076.58550993586 51.833 2 -0.29926677276880753 0.07559698403843731 0.9438714419765777 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 9374 21685 AVVEFLIGL True PC9_epitope_Rep5 959.5691689473098 959.56806993586 88.459 2 -0.29927148586787805 0.07559698403843731 0.9438714419765777 ['ENSG00000127366|ENST00000247883|TAS2R5'] 4793 14240 ALELALHAG True PC9_epitope_Rep6 893.49706663621 893.49596993586 66.664 2 -0.2993723970445022 0.07564960771611604 0.9438714419765777 ['ENSG00000168434|ENST00000307149|COG7', 'ENST00000566364.1_1_16:23400243-23404677:-|nuORF'] 77752 6128 PAAPSPATAA True PC9_epitope_Rep4 852.4341320264799 852.43302993586 30.583 2 -0.29944671135150397 0.07568287328606903 0.9438714419765777 ['ENSG00000101191|ENST00000395343|DIDO1'] 58009 6924 LERDPIPAA True H1975_Epitope_Rep2 980.5290950404798 980.52798993586 31.554 2 -0.2994798748648391 0.07568287328606903 0.9438714419765777 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000493232.5_1_7:2583168-2583660:-|nuORF', 'nc|ENSG00000106009|Q6PJG6-2|BRAT1', 'ENST00000469750.5_1_7:2583168-2595320:-|nuORF'] 14941 7053 DYNENGSNFSK True H1975_Epitope_Rep1 1273.52110910757 1273.5200099358601 32.162 2 -0.29959376491912354 0.07575212321865553 0.9438714419765777 ['ENSG00000198105|ENST00000395867|ZNF248'] 52970 5292 KRNARQMRKQP True PC9_epitope_Rep4 1411.79426878075 1411.79263490379 27.061 3 -0.29960121918444393 0.07575212321865553 0.9438714419765777 ['ENST00000570267.2_1_16:89283339-89283555:-|nuORF'] 120197 19829 VFLSGFSLF True NCI_RA007_Epitope_Rep1 1015.53786881903 1015.53676993586 81.339 2 -0.2996502695717761 0.07576875326124116 0.9438714419765777 ['ENST00000532094.5_1_11:420655-431830:-|nuORF', 'ENST00000528927.5_1_11:418373-431830:-|nuORF', 'ENSG00000185101|ENST00000332826|ANO9'] 3010 7646 AFQGPREAD True PC9_epitope_Rep2 989.4566583762098 989.45556993586 34.781 2 -0.299750761297725 0.07579519286125504 0.9438714419765777 ['ENSG00000206530|ENST00000393845|CFAP44'] 89141 12327 REFVLLPAA True NCI_RA007_Epitope_Rep3 1014.5862159937798 1014.58510993586 55.672 2 -0.2998238649118463 0.07579519286125504 0.9438714419765777 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENSG00000105287|ENST00000291281|PRKD2'] 124691 12448 VLITTDLLAR True NCI_RA007_Epitope_Rep3 1113.6757592741699 1113.67466993586 56.184 2 -0.29982515194681164 0.07579519286125504 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000492144.5_1_3:186503809-186505672:+|nuORF', 'ENST00000494445.1_1_3:186505247-186506105:+|nuORF', 'ENST00000461021.1_1_3:186505247-186505672:+|nuORF', 'ENSG00000161960|ENST00000293831|EIF4A1'] 73417 13131 NESGELVAI True PC9_epitope_Rep4 930.4658260775799 930.46472993586 58.404 2 -0.2998452463281003 0.07579519286125504 0.9438714419765777 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 46614 21333 ITTDVLYTI True PC9_epitope_Rep2 1037.5644774896898 1037.5639749679299 87.523 1 -0.2998715099008271 0.07579519286125504 0.9438714419765777 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 32022 13247 GEVELVSGVVA True NCI_RA007_Epitope_Rep4 1057.5655401188499 1057.5649749679299 58.085 1 -0.2998759798766192 0.07579519286125504 0.9438714419765777 ['nc|ENSG00000108828|Q99536-2|VAT1', 'nc|ENSG00000108828|Q99536-3|VAT1', 'ENSG00000108828|ENST00000355653|VAT1'] 37437 21599 GWRRGRPWWRW True PC9_epitope_Rep4 1597.8279518675297 1597.82684993586 91.265 2 -0.29988516108331315 0.07579519286125504 0.9438714419765777 ['ENST00000569487.1_1_16:87741959-87742978:-|nuORF'] 130279 10113 VTTDAGSRWEK True PC9_epitope_Rep3 1248.6098645423197 1248.60820490379 43.85 3 -0.29994636522712786 0.07582708187166064 0.9438714419765777 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENST00000256495.3_1_3:5024925-5025057:+|nuORF'] 74597 13594 NLDPLTETY True H1975_Epitope_Rep3 1064.50260550912 1064.5015099358602 57.575 2 -0.2999591215446873 0.07582708187166064 0.9438714419765777 ['ENSG00000173418|ENST00000334982|NAA20', 'nc|ENSG00000173418|P61599-2|NAA20'] 26502 9375 FISNQTLQ True NCI_RA007_Epitope_Rep1 949.48689587533 949.48578993586 40.459 2 -0.30003582695517866 0.07582708187166064 0.9438714419765777 ['ENST00000377865.6_1_13:67799697-67799736:-|nuORF'] 30704 11791 GALRRVQRAPA True H1975_Epitope_Rep1 1193.71052207345 1193.70942993586 50.346 2 -0.30026120190222944 0.07587968626322228 0.9438714419765777 ['ENST00000594806.5_1_19:59055852-59056390:+|nuORF'] 119927 12283 VEYDMDEEDY True H1975_Epitope_Rep2 1306.45472891018 1306.4536299358601 52.33 2 -0.3004922751035002 0.07591293398093182 0.9438714419765777 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 124356 5155 VLDSNVKHF True H1975_Epitope_Rep3 1057.55564414149 1057.5545499358602 24.932 2 -0.3004924677017313 0.07591293398093182 0.9438714419765777 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 57247 12884 LEFMFKFTRRE True H1975_Epitope_Rep1 1502.77040501834 1502.76930993586 54.629 2 -0.30063706401967316 0.07598215570585695 0.9438714419765777 ['ENSG00000236279|ENST00000422142|CLEC2L'] 75324 8748 NPYFQQNP True PC9_epitope_Rep3 1006.4508447197799 1006.44974993586 38.603 2 -0.3006643588234198 0.07598215570585695 0.9438714419765777 ['ENST00000532317.5_1_11:85669958-85670087:-|nuORF'] 16939 10526 EGENNDKFF True H1975_Epitope_Rep3 1098.4618033262998 1098.4607099358602 45.554 2 -0.30071080377252624 0.07599877682442034 0.9438714419765777 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF'] 100465 10791 SLPHAEAL True PC9_epitope_Rep3 836.43921740692 836.43812993586 46.471 2 -0.30078514951581803 0.07604726873752181 0.9438714419765777 ['ENST00000371989.7_1_9:136230106-136230334:-|nuORF'] 74761 6791 NLLRLSVSF True NCI_RA007_Epitope_Rep4 1047.6076797143498 1047.60658993586 32.744 2 -0.3008342207935129 0.07604726873752181 0.9438714419765777 ['ABCC11|p.F432S|1|0.31|ENSG00000121270|chr16:48213504-48213504|A/G|missense_variant'] 131987 17415 VYGIRLEHF True PC9_epitope_Rep3 1132.60292868708 1132.60129490379 72.157 3 -0.3008893970690386 0.07604726873752181 0.9438714419765777 ['ENST00000490881.5_1_1:163291794-163297702:+|nuORF', 'ENST00000487578.2_1_1:163295841-163298095:+|nuORF', 'ENSG00000143228|ENST00000271452|NUF2'] 106219 17761 SVPNKDVFQEL True PC9_epitope_Rep5 1274.65066672514 1274.6495699358602 73.336 2 -0.300892225839503 0.07604726873752181 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 70736 17004 MEALPLLAA True H1975_Epitope_Rep1 927.5099398190299 927.50939496793 70.829 1 -0.30094632598119697 0.07608050504505477 0.9438714419765777 ['ENSG00000123131|ENST00000379341|PRDX4', 'ENST00000495599.1_1_X:23685681-23689545:+|nuORF'] 58402 15782 LEVQFQIDP True PC9_epitope_Rep3 1087.5549754351498 1087.5538699358601 65.863 2 -0.3009781298177784 0.07608050504505477 0.9438714419765777 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2'] 37382 6492 GVYGSFASK True NCI_RA007_Epitope_Rep4 914.4497820906199 914.44868993586 31.571 2 -0.3010357798141125 0.07609712230215827 0.9438714419765777 ['ENSG00000155096|ENST00000337198|AZIN1'] 130594 5401 VVAAHLAGA True PC9_epitope_Rep6 807.46028720467 807.45918993586 28.663 2 -0.3011193228602541 0.07611100120497095 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 89537 3634 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5870849037901 20.053 3 -0.3011366628299864 0.07611100120497095 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 69329 20994 LVPRFQVIL True PC9_epitope_Rep4 1083.68045073179 1083.67934993586 88.915 2 -0.3011468336382966 0.07611100120497095 0.9438714419765777 ['ENST00000372070.7_1_1:46016813-46018162:+|nuORF'] 83328 21570 QALSPLLSV True PC9_epitope_Rep2 926.5436824754601 926.5431349679301 88.44 1 -0.301173375948762 0.07612624763960076 0.9438714419765777 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 57311 12123 LEGNAGFSI True PC9_epitope_Rep6 906.44469671018 906.44358993586 57.975 2 -0.3012071484208484 0.07612624763960076 0.9438714419765777 ['ENSG00000103326|ENST00000219611|CAPN15', 'ENST00000565010.1_1_16:602435-603513:+|nuORF'] 120880 10185 VGDVFRGG True PC9_epitope_Rep5 805.4082516318099 805.40714993586 44.164 2 -0.3012230024111826 0.07614149297750283 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 118105 9475 VATVVPTHL True H1975_Epitope_Rep2 935.54401682863 935.54290993586 41.414 2 -0.30126866298156946 0.07614149297750283 0.9438714419765777 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 96940 14885 SEVEIAWPA True H1975_Epitope_Rep1 1000.4865615221598 1000.48546993586 62.489 2 -0.30137459246984505 0.07621205581930657 0.9438714419765777 ['ENST00000495715.1_1_10:3111490-3111553:+|nuORF'] 4253 23407 AIIEYMPLL True PC9_epitope_Rep3 1061.5831047592899 1061.58257496793 95.315 1 -0.3014169792940262 0.07624390857923792 0.9438714419765777 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-3|PPP2R1B', 'ENST00000534521.5_1_11:111612322-111631898:-|nuORF', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 96378 8781 SEHGLVVIA True H1975_Epitope_Rep1 923.5076313199099 923.50652993586 38.704 2 -0.3014329096740842 0.07624390857923792 0.9438714419765777 ['ENSG00000139684|ENST00000378720|ESD'] 33961 11973 GNDLASRTFPS True H1975_Epitope_Rep1 1163.5571006934701 1163.5560099358602 51.059 2 -0.3014894498277628 0.07624390857923792 0.9438714419765777 ['ENST00000466134.5_1_21:45734838-45734964:+|nuORF'] 3035 9746 AFTVSPTFTS True NCI_RA007_Epitope_Rep4 1056.51277627 1056.51166993586 44.334 2 -0.30151639844158373 0.07626051931237862 0.9438714419765777 ['ENST00000343217.6_1_2:241503143-241503332:+|nuORF'] 102236 5351 SPSTVIHGA True PC9_epitope_Rep3 867.4450310633498 867.44392993586 25.659 2 -0.3016416579470286 0.07627712944815061 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 508 2627 AAPKPFSRWR True NCI_RA007_Epitope_Rep4 1214.6672602791398 1214.6656049037902 14.727 3 -0.30170234841855825 0.07631172007048585 0.9438714419765777 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.G520Afs*35|1|0.16|ENSG00000156222|chr15:84935495-84935495|G/-|frameshift_variant', 'nc|ENSG00000156222|O00337-2|SLC28A1'] 39894 3796 HQKLHTQEK True H1975_Epitope_Rep2 1147.60980497267 1147.60816490379 19.617 3 -0.30180955124916803 0.07632832868830351 0.9438714419765777 ['ENSG00000186448|ENST00000344387|ZNF197'] 106302 22388 SVRKRRVRK True H1975_Epitope_Rep3 1183.7737910363496 1183.7726899358602 93.595 2 -0.3018607446621825 0.07634493670886076 0.9438714419765777 ['nc|ENSG00000153132|O14967-2|CLGN', 'ENSG00000153132|ENST00000325617|CLGN'] 18412 14528 EKELVAHLRSI True NCI_RA007_Epitope_Rep1 1293.7404847890498 1293.7393899358601 60.555 2 -0.3019119256711394 0.07636017116760761 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 120208 12924 VFLVRRAIKD True H1975_Epitope_Rep3 1215.7451762466696 1215.7440699358601 54.94 2 -0.3019259014358673 0.07636017116760761 0.9438714419765777 ['ENSG00000116198|ENST00000378230|CEP104', 'nc|ENSG00000116198|O60308-3|CEP104', 'ENST00000494653.5_1_1:3750422-3768971:-|nuORF'] 127002 11207 VPWMPPGKSSA True PC9_epitope_Rep6 1155.57466533391 1155.5735699358602 54.086 2 -0.301977276894598 0.07637540453074433 0.9438714419765777 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'nc|ENSG00000136811|Q5BJF6-4|ODF2', 'nc|ENSG00000136811|Q5BJF6|ODF2', 'nc|ENSG00000136811|Q5BJF6-6|ODF2', 'nc|ENSG00000136811|Q5BJF6-10|ODF2', 'ENST00000444993.6_1_9:131219684-131223448:+|nuORF'] 19535 7127 ELQRDKVV True PC9_epitope_Rep6 985.5556441414898 985.55454993586 36.468 2 -0.30201699578044394 0.07637540453074433 0.9438714419765777 ['nc|ENSG00000113163|Q9Y5P4-2|CERT1', 'ENSG00000113163|ENST00000643780|CERT1', 'nc|ENSG00000113163|Q9Y5P4-3|CERT1'] 100946 11171 SLSQNPSL True PC9_epitope_Rep1 844.42904664604 844.4279499358599 47.854 2 -0.30203748787392054 0.07638651685393258 0.9438714419765777 ['ENST00000595638.1_1_19:51485457-51485655:-|nuORF'] 80975 9418 PNIICDCCKK True H1975_Epitope_Rep3 1135.51880733391 1135.51770993586 41.229 2 -0.3020571157957826 0.07638651685393258 0.9438714419765777 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'nc|ENSG00000197530|Q96AX9-5|MIB2', 'nc|ENSG00000197530|Q96AX9-9|MIB2', 'ENST00000511502.5_1_1:1550926-1563560:+|nuORF', 'ENST00000507229.5_1_1:1551767-1563881:+|nuORF', 'ENST00000508455.1_1_1:1558985-1559326:+|nuORF'] 99632 18181 SLFSAWRSL True PC9_epitope_Rep2 1065.56072952193 1065.5596299358601 75.239 2 -0.30210258016130515 0.07638651685393258 0.9438714419765777 ['ENST00000389224.7_1_16:2588309-2588624:+|nuORF'] 90023 10634 RGGEVYGL True PC9_epitope_Rep5 849.4344663796498 849.43391496793 45.892 1 -0.3021460631922705 0.07638651685393258 0.9438714419765777 ['ENST00000433861.6_2_3:9773506-9775843:+|nuORF', 'ENST00000420291.1_1_3:9773506-9774924:+|nuORF'] 5222 6516 ALQASALNA True PC9_epitope_Rep5 857.46068112749 857.45958993586 30.036 2 -0.3022045388651553 0.07638651685393258 0.9438714419765777 ['ENSG00000109107|ENST00000226253|ALDOC'] 74629 14214 NLEGQLCDLDP True PC9_epitope_Rep1 1215.5441530512699 1215.5430499358602 59.497 2 -0.3023677405239448 0.07642109804767555 0.9438714419765777 ['nc|ENSG00000107821|Q96I82-2|KAZALD1', 'ENSG00000107821|ENST00000370200|KAZALD1'] 131511 17890 VVVEIIKAV True PC9_epitope_Rep2 968.6270181765998 968.62592993586 74.116 2 -0.30249180055696295 0.07643632702955347 0.9438714419765777 ['ENSG00000066654|ENST00000396083|THUMPD1'] 86253 5056 QPYRYTVKA True PC9_epitope_Rep2 1124.59784330664 1124.5961849037901 24.82 3 -0.3025081131326436 0.07643632702955347 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 2559 9670 AERLVGWMT True H1975_Epitope_Rep3 1061.5328005219299 1061.5317099358601 42.215 2 -0.30254550168976085 0.07644468410173452 0.9438714419765777 ['ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 76210 12774 NRWWRWRRARW True NCI_RA007_Epitope_Rep1 1727.9134128269898 1727.91230993586 53.676 2 -0.30255807149037006 0.07644468410173452 0.9438714419765777 ['nc|ENSG00000171160|Q8NDC4-2|MORN4'] 123503 20040 VIHATRRDIP True H1975_Epitope_Rep2 1176.6727395824 1176.6716499358602 83.064 2 -0.30256297783386193 0.07644468410173452 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 130780 13810 VVEIRNFL True PC9_epitope_Rep6 988.57056592964 988.56946993586 64.923 2 -0.30259715337627885 0.07644468410173452 0.9438714419765777 ['ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 99124 6960 SLAHGAVI True PC9_epitope_Rep2 766.43373810366 766.43264993586 32.169 2 -0.3026047323607913 0.07644468410173452 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A'] 22859 4476 EVEPCKFAGP True NCI_RA007_Epitope_Rep3 1075.50083168731 1075.4997299358602 24.422 2 -0.30266652323690585 0.07644468410173452 0.9438714419765777 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'ENST00000591632.5_1_18:60191431-60230292:+|nuORF'] 135764 16011 YENELMLMA True H1975_Epitope_Rep1 1112.48821839828 1112.4871299358601 66.921 2 -0.30267055313526137 0.07644468410173452 0.9438714419765777 ['nc|ENSG00000111481|P61923-5|COPZ1', 'ENSG00000111481|ENST00000262061|COPZ1', 'ENST00000551412.5_1_12:54718935-54741629:+|nuORF', 'nc|ENSG00000111481|P61923-3|COPZ1', 'nc|ENSG00000111481|P61923-4|COPZ1'] 78041 2642 PALPPQAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 14.814 2 -0.3028229259147708 0.07654977802541474 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 41839 3421 IDSYRCFQPKQ True NCI_RA007_Epitope_Rep1 1383.6605202161898 1383.65887490379 17.206 3 -0.30285290746775506 0.07654977802541474 0.9438714419765777 ['APEX2|p.L464Cfs*14|3|0.13|ENSG00000169188|chrX:55007261-55007261|G/-|frameshift_variant', 'ENSG00000169188|ENST00000374987|APEX2'] 66909 15428 LSWRSRALP True PC9_epitope_Rep3 1084.61416207712 1084.61306993586 64.499 2 -0.30294129271709697 0.07661891838458636 0.9438714419765777 ['ENST00000287652.8_1_3:10290066-10290432:+|nuORF'] 126280 11176 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48561496793 47.977 1 -0.3029720618745382 0.07661891838458636 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 91370 8217 RMRAWKLAVHP True NCI_RA007_Epitope_Rep2 1363.7659287745898 1363.76428490379 36.599 3 -0.30302952287574514 0.07663275942633263 0.9438714419765777 ['ENST00000549897.1_1_12:58087944-58088778:+|nuORF'] 65345 4229 LSENEQNTIEK True NCI_RA007_Epitope_Rep1 1303.62557417611 1303.6239149037901 20.557 3 -0.30305583829475735 0.07663275942633263 0.9438714419765777 ['ENSG00000023516|ENST00000025301|AKAP11'] 101865 21203 SPLAVFGL True PC9_epitope_Rep3 802.45889022234 802.45778993586 86.848 2 -0.3030558637023132 0.07663275942633263 0.9438714419765777 ['ATG4C|p.L211V|2|0.41|ENSG00000125703|chr1:62819241-62819241|C/G|missense_variant'] 29213 21585 FVCNWMYCGKR True PC9_epitope_Rep3 1405.6093536738097 1405.6082499358602 88.322 2 -0.30326019776035185 0.07668529734198372 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 6464 9732 APTAEGLAA True PC9_epitope_Rep3 799.4075829254699 799.40648993586 42.387 2 -0.3033085666100612 0.07671986197972827 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 61711 14435 LLIHRKNLNYL True PC9_epitope_Rep4 1395.83505388023 1395.83341490379 63.432 3 -0.30335231358295545 0.07673645430856321 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573716.1_1_17:1581802-1582496:-|nuORF'] 128500 11167 VSFTGSVP True PC9_epitope_Rep3 792.4017692690398 792.40066993586 47.955 2 -0.30335771167003156 0.07675028752156411 0.9438714419765777 ['ENST00000491436.1_1_1:165638124-165649867:-|nuORF', 'nc|ENSG00000143149|P49189-2|ALDH9A1', 'nc|ENSG00000143149|P49189|ALDH9A1', 'ENSG00000143149|ENST00000354775|ALDH9A1'] 42271 18759 IEIEINQTLEI True H1975_Epitope_Rep3 1313.70784724809 1313.7067499358602 78.675 2 -0.30338703471509026 0.07675028752156411 0.9438714419765777 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96', 'CD96|p.P408Lfs*10|1|0.26|ENSG00000153283|chr3:111606786-111606786|C/-|frameshift_variant'] 140360 15398 YYEKLHTYF True PC9_epitope_Rep1 1262.5971746003 1262.59552490379 64.047 3 -0.3034190737188174 0.07675028752156411 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 106810 10458 SYGQQSSF True PC9_epitope_Rep6 902.3770110731799 902.37590993586 50.981 2 -0.30348454629089433 0.07678484788585599 0.9438714419765777 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'nc|ENSG00000182944|Q01844-6|EWSR1', 'ENST00000479135.5_1_22:29673993-29684776:+|nuORF', 'ENST00000483415.5_1_22:29664325-29684776:+|nuORF', 'nc|ENSG00000182944|Q01844-4|EWSR1'] 126265 10052 VPHLLTEA True PC9_epitope_Rep2 878.48616759934 878.48506993586 43.992 2 -0.3035070971857695 0.07680143755615454 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 44308 7597 ILYNNHKFTNA True NCI_RA007_Epitope_Rep1 1333.67788453249 1333.6767899358601 33.544 2 -0.3037055799892027 0.07683185395479211 0.9438714419765777 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC', 'PTPRC|p.L654Wfs*16|1|0.17|ENSG00000081237|chr1:198731707-198731707|T/-|frameshift_variant', 'PTPRC|p.L652Ffs*18|1|0.26|ENSG00000081237|chr1:198731706-198731706|C/-|frameshift_variant'] 102288 4944 SPVCCRSGK True PC9_epitope_Rep3 935.4317065816699 935.43060993586 24.11 2 -0.3037188210898321 0.07683185395479211 0.9438714419765777 ['ENST00000587472.5_1_19:45572355-45572502:+|nuORF'] 131612 12811 VVYGGGAAEI True PC9_epitope_Rep6 934.4759968384599 934.47488993586 60.781 2 -0.3037257097101424 0.07683185395479211 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 91962 4880 RPPPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 25.363 2 -0.3037301845529627 0.07683185395479211 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 14425 7602 DTLEPLKNP True H1975_Epitope_Rep1 1025.53932537101 1025.53822993586 34.232 2 -0.303820826384103 0.07684844129009073 0.9438714419765777 ['ENSG00000196220|ENST00000383836|SRGAP3', 'nc|ENSG00000196220|O43295-2|SRGAP3'] 125935 21115 VPAAAFSDVL True PC9_epitope_Rep1 988.5229470308799 988.52184993586 86.049 2 -0.3039139076910826 0.07688299554405635 0.9438714419765777 ['ENSG00000174282|ENST00000380599|ZBTB4'] 112256 12731 TLYPICQCVSF True H1975_Epitope_Rep1 1272.5882667927197 1272.5871699358602 54.029 2 -0.3039593660408777 0.07691616658881023 0.9438714419765777 ['chr3:118905718-119045392|154|10.07|0.0|19.94|-|1|TE_info:L1PA3,L1PA3_dup2038,L1,LINE,donor,+,119045392,119051153|IGSF11,None|85'] 39500 11719 HPATPRHTHP True PC9_epitope_Rep1 1149.57917355073 1149.57751490379 49.952 3 -0.3039875925542294 0.07691616658881023 0.9438714419765777 ['ENST00000558388.6_1_15:31515486-31523017:-|nuORF'] 21007 4407 ERAPPQTHL True PC9_epitope_Rep5 1047.5461420869499 1047.54504993586 22.022 2 -0.30399447763703225 0.07693275121723352 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 2922 10163 AFESKHSCTL True NCI_RA007_Epitope_Rep4 1121.5175443806102 1121.51644993586 45.949 2 -0.3040588041513518 0.07696591868633335 0.9438714419765777 ['ENSG00000140795|ENST00000394809|MYLK3', 'ENST00000564731.5_1_16:46761123-46772038:-|nuORF', 'nc|ENSG00000140795|Q32MK0-4|MYLK3'] 40773 17453 HVFDHPWETV True PC9_epitope_Rep5 1265.58292151849 1265.58182993586 72.132 2 -0.3040614342321815 0.07696591868633335 0.9438714419765777 ['ENSG00000101166|ENST00000355937|PRELID3B', 'nc|ENSG00000101166|Q9Y3B1-2|PRELID3B', 'ENST00000466051.1_1_20:57613469-57617839:-|nuORF'] 67492 20755 LTELCKMAK True PC9_epitope_Rep1 1035.5456737047498 1035.5445699358602 84.661 2 -0.3040789596365794 0.07698250152707413 0.9438714419765777 ['nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7', 'NLRP7|p.G405Afs*11|1|0.21|ENSG00000167634|chr19:54939605-54939605|C/-|frameshift_variant'] 3009 8594 AFQGPREAD True PC9_epitope_Rep1 989.4566583762098 989.45556993586 37.892 2 -0.30415385995075717 0.07699908377198499 0.9438714419765777 ['ENSG00000206530|ENST00000393845|CFAP44'] 115125 15226 TTYEGSITV True PC9_epitope_Rep5 969.46549172441 969.46494496793 63.575 1 -0.3042421958425954 0.07705159528600172 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant', 'MUC16|p.T2806Lfs*14|1|0.17|ENSG00000181143|chr19:8972724-8972724|G/-|frameshift_variant'] 63902 20279 LPVSPSLLPV True PC9_epitope_Rep2 1020.62193279616 1020.62082993586 83.424 2 -0.30428329668616566 0.0770640224186247 0.9438714419765777 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 79826 4984 PIEHGIITN True NCI_RA007_Epitope_Rep3 992.52909504048 992.52798993586 26.602 2 -0.3042883969739424 0.0770640224186247 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 51888 27086 KKRKRKKREKL True PC9_epitope_Rep3 1497.0103329035994 1497.00868490379 111.43 3 -0.30430700012932244 0.0770640224186247 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 119686 5591 VESWRSQYRPA True PC9_epitope_Rep5 1377.67894716165 1377.67729490379 26.508 3 -0.3043818172028574 0.0770640224186247 0.9438714419765777 ['ENST00000550379.1_1_12:56606885-56607800:-|nuORF'] 82424 13739 PVAVVQAI True NCI_RA007_Epitope_Rep4 795.4854393233499 795.48434993586 60.073 2 -0.3043963067543803 0.07707367891654991 0.9438714419765777 ['ENST00000523562.5_1_16:67201036-67203307:+|nuORF', 'ENST00000521314.5_1_16:67198707-67203685:+|nuORF', 'nc|ENSG00000102878|Q9ULV5-2|HSF4', 'ENSG00000102878|ENST00000521374|HSF4', 'ENST00000520528.1_1_16:67201435-67203617:+|nuORF'] 97194 14535 SFIQHIVSL True PC9_epitope_Rep6 1042.58113061334 1042.58002993586 67.803 2 -0.304407612261343 0.07707367891654991 0.9438714419765777 ['nc|ENSG00000029363|Q9NYF8-3|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-2|BCLAF1', 'ENSG00000029363|ENST00000531224|BCLAF1', 'nc|ENSG00000029363|Q9NYF8-4|BCLAF1'] 8195 5323 ATGRRAFPP True NCI_RA007_Epitope_Rep4 971.5300980999898 971.52900993586 27.038 2 -0.30441640647542184 0.07707367891654991 0.9438714419765777 ['ENST00000264360.6_2_4:134072476-134072524:+|nuORF'] 94328 9185 RWWFRRLFLIF True NCI_RA007_Epitope_Rep5 1638.9299573245796 1638.9288699358601 41.981 2 -0.3044182094763864 0.07707367891654991 0.9438714419765777 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 10816 3791 DAGGRQFA True NCI_RA007_Epitope_Rep4 820.38276515996 820.38166993586 20.759 2 -0.3044213054827259 0.07707367891654991 0.9438714419765777 ['AMER3|p.A557Rfs*127|1|0.35|ENSG00000178171|chr2:130763735-130763735|G/-|frameshift_variant'] 22609 10575 ETPSLPAS True PC9_epitope_Rep1 800.39159850816 800.39050993586 45.567 2 -0.30443081444639297 0.07707367891654991 0.9438714419765777 ['ADCY2|p.G121Dfs*75|1|0.24|ENSG00000078295|chr5:7414722-7414722|G/-|frameshift_variant'] 87012 5793 QSALSIAKEK True NCI_RA007_Epitope_Rep5 1073.6080736371698 1073.6069699358602 28.969 2 -0.30451683819956604 0.07709025594970813 0.9438714419765777 ['TET3|p.G1454Afs*77|1|0.36|ENSG00000187605|chr2:74101148-74101148|G/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3'] 56198 5964 LDPGGQSFP True H1975_Epitope_Rep2 916.42904664604 916.4279499358599 27.922 2 -0.30454645363120514 0.07710683238738415 0.9438714419765777 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO'] 27048 18873 FLNQLQSL True PC9_epitope_Rep3 961.52328138405 961.52218993586 77.817 2 -0.3046672480203474 0.07715932970526429 0.9438714419765777 ['ENST00000495842.5_1_3:101504262-101504385:+|nuORF'] 79191 14089 PGEQRRNDI True PC9_epitope_Rep6 1083.54211933567 1083.54102993586 66.067 2 -0.3047191462522626 0.07717174619708697 0.9438714419765777 ['nc|ENSG00000078043|O75928-2|PIAS2'] 92815 5759 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 27.223 2 -0.30472853162200886 0.07717174619708697 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 6495 10497 APTLPGSAA True PC9_epitope_Rep5 783.41266830591 783.41156993586 45.363 2 -0.3047545533532289 0.07717174619708697 0.9438714419765777 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16'] 10333 15880 C[Carbamidomethyl]IESLIAVFQK True H1975_Epitope_Rep1 1306.6955090220097 1306.6944099358602 66.393 2 -0.30476846302033805 0.07717174619708697 0.9438714419765777 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 29897 7937 FWCDHMSLIVT True H1975_Epitope_Rep3 1350.6100648664599 1350.6089699358602 35.499 2 -0.304903148382282 0.07724080958281702 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 117922 6181 VAQQAYSTL True NCI_RA007_Epitope_Rep4 979.49746055903 979.49636993586 30.385 2 -0.30492308909170923 0.07724080958281702 0.9438714419765777 ['ENSG00000236699|ENST00000420470|ARHGEF38'] 139955 14159 YVIEDDVNM-[Oxidation] True PC9_epitope_Rep5 1112.46959150912 1112.4684899358601 59.474 2 -0.30500611292177937 0.07727533941527188 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 78398 11041 PAVSENSDLEQ True H1975_Epitope_Rep1 1187.53061116211 1187.52950993586 47.432 2 -0.3051051539425977 0.07732366039362161 0.9438714419765777 ['nc|nan|Q9H6X5-2|C19orf44', 'ENSG00000105072|ENST00000221671|C19orf44'] 109392 12366 TGPAWTGTA True PC9_epitope_Rep5 860.4028318981999 860.4022849679301 52.561 1 -0.30511012821561606 0.07732366039362161 0.9438714419765777 ['ENST00000564397.5_1_16:5075481-5078139:-|nuORF'] 22177 16161 ETCDYFLSY True H1975_Epitope_Rep2 1139.44812740811 1139.4470299358602 67.375 2 -0.30511179226167007 0.07732366039362161 0.9438714419765777 ['ENSG00000260230|ENST00000561981|FRRS1L'] 37144 10439 GVTFEAAV True H1975_Epitope_Rep2 792.4017692690398 792.40122496793 45.169 1 -0.30514740628642356 0.07732366039362161 0.9438714419765777 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.G2269Afs*6|1|0.24|ENSG00000158683|chr7:47827398-47827398|C/-|frameshift_variant', 'PKD1L1|p.R1956Pfs*77|1|0.33|ENSG00000158683|chr7:47836996-47836997|GC/-|frameshift_variant'] 82058 8223 PSVPVRAP True PC9_epitope_Rep1 821.47593726881 821.47484993586 36.462 2 -0.30517831049302524 0.07734022877049328 0.9438714419765777 ['ENST00000353258.7_1_16:19533228-19533372:-|nuORF'] 94903 9811 RYPDRITLI True NCI_RA007_Epitope_Rep5 1145.65569253593 1145.65405490379 44.383 3 -0.3052433414192927 0.07735401853048912 0.9438714419765777 ['ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF'] 20833 5705 EQPTWWDP True H1975_Epitope_Rep2 1057.45051036661 1057.44940993586 26.941 2 -0.30525180731168605 0.07735401853048912 0.9438714419765777 ['ENST00000359943.7_1_7:121004237-121011402:-|nuORF'] 79489 11075 PGPSLSTGL True PC9_epitope_Rep2 827.43888305375 827.43778993586 47.918 2 -0.3052595945017479 0.07735401853048912 0.9438714419765777 ['ENST00000433234.2_11:204190-204341:-|nuORF'] 88684 15601 RCCSCSCK True PC9_epitope_Rep6 888.30743466868 888.30632993586 72.216 2 -0.3052724157354363 0.07738854075018405 0.9438714419765777 ['ENST00000229812.7_1_6:36462563-36462647:-|nuORF'] 92816 5851 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 27.571 2 -0.3053783956845751 0.07740232691755243 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 100922 8680 SLSLYSTKATT True H1975_Epitope_Rep2 1170.61321858726 1170.6121299358601 38.348 2 -0.3053846321505029 0.07740232691755243 0.9438714419765777 ['ENST00000399928.5_2_21:30503098-30503236:+|nuORF', 'ENST00000399926.5_2_21:30502962-30503236:+|nuORF', 'ENST00000339024.8_2_21:30464771-30503236:+|nuORF'] 128714 17349 VSPGLTPSL True PC9_epitope_Rep3 869.48583324617 869.48472993586 71.905 2 -0.3053894296506388 0.07740232691755243 0.9438714419765777 ['ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 95556 5657 SASDVTEQIIK True NCI_RA007_Epitope_Rep5 1189.6190322436898 1189.61737490379 28.449 3 -0.3054534199951467 0.0774312848961419 0.9438714419765777 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 116968 13561 TYPKIWVKV True PC9_epitope_Rep6 1132.66446631448 1132.66282490379 63.893 3 -0.3055331147504456 0.0774312848961419 0.9438714419765777 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 12210 9033 DIPAKGPNI True NCI_RA007_Epitope_Rep5 923.5076313199099 923.50652993586 41.402 2 -0.30555136961077467 0.0774312848961419 0.9438714419765777 ['nc|ENSG00000005448|Q9H977-4|WDR54', 'nc|ENSG00000005448|Q9H977-3|WDR54', 'ENSG00000005448|ENST00000348227|WDR54', 'ENST00000465134.5_1_2:74650023-74652276:+|nuORF', 'ENST00000468778.5_1_2:74650926-74652825:+|nuORF'] 70311 23544 LYPGIVTFVI True PC9_epitope_Rep1 1120.65323292444 1120.65212993586 95.353 2 -0.3055631163532594 0.0774312848961419 0.9438714419765777 ['ENSG00000188037|ENST00000343257|CLCN1'] 43076 13584 IGINRYEL True PC9_epitope_Rep1 976.53418042092 976.53308993586 57.107 2 -0.3055857524479973 0.0774312848961419 0.9438714419765777 ['ENSG00000177706|ENST00000313766|FAM20C'] 36259 8911 GVGGWQHFDLK True NCI_RA007_Epitope_Rep1 1242.6145559999402 1242.6129149037902 38.662 3 -0.305624412362425 0.07744784747405838 0.9438714419765777 ['ENSG00000150893|ENST00000280481|FREM2'] 116964 16592 TYPKIWVKV True PC9_epitope_Rep3 1132.66446631448 1132.6633699358601 68.958 2 -0.30570762946456226 0.07746440945730032 0.9438714419765777 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 45839 12939 ISQCEQYAK True PC9_epitope_Rep1 1068.4909952796 1068.4898899358602 54.642 2 -0.3057464609182906 0.07748097084589975 0.9438714419765777 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A'] 114657 7592 TSQPSTSVP True H1975_Epitope_Rep2 902.4345259493 902.43342993586 34.155 2 -0.3058069305973074 0.07749474931337175 0.9438714419765777 ['nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2', 'nc|ENSG00000053524|Q86YR7-2|MCF2L2', 'ENST00000488149.5_1_3:182948954-183027611:-|nuORF', 'nc|ENSG00000053524|Q86YR7-3|MCF2L2'] 88683 15504 RCCSCSCK True PC9_epitope_Rep6 888.30743466868 888.30632993586 71.815 2 -0.305876768595204 0.07749474931337175 0.9438714419765777 ['ENST00000229812.7_1_6:36462563-36462647:-|nuORF'] 9297 16465 AVSAATFSL True PC9_epitope_Rep2 865.45453311789 865.4539849679301 68.574 1 -0.30595481806508584 0.07749474931337175 0.9438714419765777 ['ENSG00000183354|ENST00000399933|KIAA2026', 'ENST00000540714.1_1_9:5919686-5933837:-|nuORF'] 982 8055 AEADENDMFNY True H1975_Epitope_Rep2 1317.48194671753 1317.48084993586 35.932 2 -0.3060522757923835 0.07752925971135205 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3'] 53242 18971 KTETFFKEF True PC9_epitope_Rep3 1175.5862755634298 1175.5851699358602 78.195 2 -0.30611891287903775 0.07754581844944264 0.9438714419765777 ['nc|ENSG00000170854|Q8IUF8-4|RIOX2', 'ENSG00000170854|ENST00000394198|RIOX2', 'nc|ENSG00000170854|Q8IUF8-2|RIOX2'] 108137 9145 TDQARKEAWKR True NCI_RA007_Epitope_Rep2 1387.7320453636696 1387.7303849037899 40.179 3 -0.3061933206244427 0.0775803266917968 0.9438714419765777 ['WBP11|p.R26W|1|0.19|ENSG00000084463|chr12:14800772-14800772|G/A|missense_variant'] 109101 16869 TFGGKTSFVSL True PC9_epitope_Rep3 1142.5971746003 1142.5960699358602 70.042 2 -0.30631260885997585 0.07761344055140723 0.9438714419765777 ['nc|ENSG00000273749|Q7L576-2|CYFIP1'] 48683 6422 KELSSSLHQK True NCI_RA007_Epitope_Rep5 1155.62478633047 1155.62368993586 31.372 2 -0.3063230065486958 0.07761344055140723 0.9438714419765777 ['nc|ENSG00000072571|O75330-4|HMMR', 'HMMR|p.K666Nfs*11|1|0.36|ENSG00000072571|chr5:163490420-163490420|A/-|frameshift_variant', 'nc|ENSG00000072571|O75330-2|HMMR', 'nc|ENSG00000072571|O75330|HMMR', 'ENSG00000072571|ENST00000393915|HMMR'] 133917 7575 WNPRRWWRWCW True NCI_RA007_Epitope_Rep2 1730.8153385785 1730.81368490379 34.091 3 -0.30638772171837014 0.07762860322360628 0.9438714419765777 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 140721 13745 YYQGGKFQF True PC9_epitope_Rep6 1136.52909504048 1136.5279899358602 64.664 2 -0.30638817758262704 0.07762860322360628 0.9438714419765777 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'nc|ENSG00000184182|Q969M7-4|UBE2F'] 44307 7137 ILYNNHKFTNA True H1975_Epitope_Rep3 1333.67788453249 1333.6767899358601 32.424 2 -0.3065278988488551 0.07766171297293417 0.9438714419765777 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC', 'PTPRC|p.L654Wfs*16|1|0.17|ENSG00000081237|chr1:198731707-198731707|T/-|frameshift_variant', 'PTPRC|p.L652Ffs*18|1|0.26|ENSG00000081237|chr1:198731706-198731706|C/-|frameshift_variant'] 82745 7510 PVQDTPVA True NCI_RA007_Epitope_Rep4 825.4232329896099 825.42212993586 35.533 2 -0.3066080722006372 0.07766171297293417 0.9438714419765777 ['ENSG00000186063|ENST00000340020|AIDA', 'nc|ENSG00000186063|Q96BJ3-2|AIDA', 'ENST00000514881.1_1_4:159199390-159199825:+|nuORF', 'ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 108225 5047 TEAFKRDINSK True H1975_Epitope_Rep3 1307.6833638357496 1307.68171490379 24.535 3 -0.3066421782192564 0.07767547874154239 0.9438714419765777 ['ENST00000450663.1_1_1:173111181-173111367:-|nuORF'] 138073 5459 YQDTPKQI True PC9_epitope_Rep4 991.4974605590298 991.49636993586 27.738 2 -0.3066543906667501 0.07767547874154239 0.9438714419765777 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 105146 8480 STLTFLQQHG True NCI_RA007_Epitope_Rep5 1130.57202248162 1130.57092993586 39.301 2 -0.3066770845630982 0.07767547874154239 0.9438714419765777 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-2|ABCA13'] 27944 11782 FQQKRRRRRDP True H1975_Epitope_Rep1 1541.8763586119296 1541.8752699358602 50.312 2 -0.3069337284555734 0.07773750134587087 0.9438714419765777 ['PPWD1|p.R12K|1|0.15|ENSG00000113593|chr5:65563345-65563345|G/A|missense_variant'] 27068 10685 FLPETEPP True PC9_epitope_Rep1 928.4541987647199 928.45310993586 45.99 2 -0.3069692650373374 0.07773750134587087 0.9438714419765777 ['SELPLG|p.E130Rfs*17|1|0.14|ENSG00000110876|chr12:108623890-108623920|CCGTGGGCACTGGTTGAGTGGTCTGTGCCTC/-|frameshift_variant', 'ENSG00000110876|ENST00000550948|SELPLG', 'nc|ENSG00000110876|Q14242-2|SELPLG'] 57079 5838 LEELDRRQEK True H1975_Epitope_Rep1 1314.6891774921799 1314.68752490379 27.527 3 -0.3070124451063129 0.07773750134587087 0.9438714419765777 ['ENSG00000152578|ENST00000282499|GRIA4', 'ENST00000525032.1_1_11:105481676-105732994:+|nuORF', 'nc|ENSG00000152578|P48058-2|GRIA4'] 16332 12514 EEKGVTLLY True H1975_Epitope_Rep2 1050.5597264624198 1050.5586299358602 53.229 2 -0.30703879764318903 0.07773750134587087 0.9438714419765777 ['nc|ENSG00000111452|Q6QNK2-4|ADGRD1', 'ENSG00000111452|ENST00000261654|ADGRD1', 'ENST00000541937.2_1_12:131451015-131457650:+|nuORF'] 48482 15115 KEEYWRRREEE True NCI_RA007_Epitope_Rep1 1608.76446769076 1608.76336993586 62.864 2 -0.30704014750673725 0.07773750134587087 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 92881 5527 RRMQEMLQRMK True NCI_RA007_Epitope_Rep4 1505.7741275831297 1505.77193987172 27.855 4 -0.3070591527457417 0.07773750134587087 0.9438714419765777 ['ENSG00000184702|ENST00000455784|SEPTIN5', 'ENST00000470814.1_1_22:19709577-19710004:+|nuORF'] 116462 14873 TYAGLHVLL True PC9_epitope_Rep6 985.55966689277 985.55856993586 69.187 2 -0.307120597436429 0.07773750134587087 0.9438714419765777 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5', 'nc|ENSG00000290203|Q96PH1-5|NOX5', 'ENST00000527315.5_1_15:69323805-69349033:+|nuORF'] 67764 13770 LTGTWTSV True PC9_epitope_Rep6 863.43888305375 863.43778993586 64.768 2 -0.3071815402547313 0.0777885443583118 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 131988 17070 VYGIRLEHF True PC9_epitope_Rep5 1132.60292868708 1132.60129490379 70.679 3 -0.3071838042839329 0.0777885443583118 0.9438714419765777 ['ENST00000490881.5_1_1:163291794-163297702:+|nuORF', 'ENST00000487578.2_1_1:163295841-163298095:+|nuORF', 'ENSG00000143228|ENST00000271452|NUF2'] 130213 18386 VTSETAKLP True PC9_epitope_Rep3 944.5178616504398 944.51676993586 75.929 2 -0.3072353933483716 0.0778230364801091 0.9438714419765777 ['ENST00000523988.5_1_13:45969985-45970081:-|nuORF'] 100540 17913 SLPTAPLAP True PC9_epitope_Rep3 865.49091862661 865.48982993586 74.104 2 -0.3072728835359962 0.07783818700543683 0.9438714419765777 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 112712 11178 TPHFSGLAA True PC9_epitope_Rep2 899.4501164437899 899.44900993586 48.323 2 -0.3072785118075357 0.07783818700543683 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 67540 9667 LTEPPLNTP True PC9_epitope_Rep1 980.51786165044 980.51676993586 42.04 2 -0.30734258676269954 0.07785473336682695 0.9438714419765777 ['ENSG00000115091|ENST00000263238|ACTR3', 'ENST00000489779.1_1_2:114684960-114691984:+|nuORF'] 66553 7221 LSSIPGAR True NCI_RA007_Epitope_Rep4 799.45520182423 799.45410993586 34.409 2 -0.30735874081426784 0.07788502942442946 0.9438714419765777 ['ENST00000371370.7_1_1:54411767-54412118:+|nuORF'] 126864 19575 VPTLVTPSA True PC9_epitope_Rep3 883.50148331031 883.50038993586 80.53 2 -0.3073765286705351 0.07788502942442946 0.9438714419765777 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 122760 11925 VGVFTREEVR True PC9_epitope_Rep2 1190.64077074778 1190.6391149037902 51.193 3 -0.30740820930247176 0.07788502942442946 0.9438714419765777 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 101185 9810 SLVSVTSVP True NCI_RA007_Epitope_Rep3 887.49639792987 887.4958449679301 45.654 1 -0.3074569630749201 0.07788502942442946 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T6256N|2|0.26|ENSG00000181143|chr19:8958003-8958003|G/T|missense_variant'] 124406 8833 VLEESLPP True PC9_epitope_Rep1 882.4698488288599 882.46874993586 38.817 2 -0.30751860394188096 0.07790157346107612 0.9438714419765777 ['nc|ENSG00000112769|Q16363-2|LAMA4', 'nc|ENSG00000112769|Q16363|LAMA4', 'ENSG00000112769|ENST00000230538|LAMA4'] 68492 7967 LTVKAREHCL True H1975_Epitope_Rep1 1168.6386625727998 1168.63756993586 35.594 2 -0.30752322637869123 0.0779167189938822 0.9438714419765777 ['ENST00000443199.6_1_17:73623504-73629591:-|nuORF', 'nc|ENSG00000108469|O94762-4|RECQL5', 'ENSG00000108469|ENST00000317905|RECQL5'] 126276 11039 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48506993586 47.449 2 -0.30752690607236716 0.0779167189938822 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 113090 18559 TPYNYPVPV True PC9_epitope_Rep4 1048.5229470308798 1048.5223749679299 79.463 1 -0.3076026658454198 0.07794980355573097 0.9438714419765777 ['ENSG00000170906|ENST00000485876|NDUFA3'] 85170 13398 QKARWLIP True NCI_RA007_Epitope_Rep5 1010.6025347642599 1010.60142993586 58.222 2 -0.3076282979465557 0.07794980355573097 0.9438714419765777 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-3|ACAD10', 'ENST00000508303.5_1_12:112159488-112186840:+|nuORF'] 678 12651 AAVDAGMAM True PC9_epitope_Rep4 835.35681030591 835.35570993586 56.502 2 -0.3076337580358313 0.07795795364856138 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 74216 13414 NIDPITM[Oxidation]AY True H1975_Epitope_Rep1 1052.48484765044 1052.4842749679299 56.711 1 -0.30763733476287203 0.07795795364856138 0.9438714419765777 ['ENSG00000116285|ENST00000377482|ERRFI1'] 102230 7766 SPSSTTLTSA True PC9_epitope_Rep1 950.4556553167 950.45454993586 34.693 2 -0.30766325662335714 0.07795795364856138 0.9438714419765777 ['ENST00000489678.1_1_14:74762662-74763162:-|nuORF'] 11742 11957 DHHENKYLLL True PC9_epitope_Rep2 1280.65133543148 1280.6502299358601 51.314 2 -0.30767930467524507 0.07795795364856138 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 134070 13386 WQLQDDKNQSL True PC9_epitope_Rep4 1373.6575430107298 1373.65644993586 59.392 2 -0.3076858022454029 0.07795795364856138 0.9438714419765777 ['ENSG00000119655|ENST00000555619|NPC2'] 82187 21624 PTFPLLLGT True PC9_epitope_Rep4 957.5535188831699 957.55242993586 91.366 2 -0.3077005380964294 0.07795795364856138 0.9438714419765777 ['nc|ENSG00000123427|Q96AZ1-3|EEF1AKMT3', 'ENSG00000123427|ENST00000300209|EEF1AKMT3'] 5083 9806 ALLQETAY True H1975_Epitope_Rep3 907.46509780159 907.46454496793 42.745 1 -0.3077057278815934 0.07795795364856138 0.9438714419765777 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 101862 7066 SPLATSTTA True PC9_epitope_Rep5 847.42871229287 847.42760993586 32.147 2 -0.3077590061465827 0.07797449281601464 0.9438714419765777 ['ENSG00000127423|ENST00000374298|AUNIP', 'nc|ENSG00000127423|Q9H7T9-2|AUNIP'] 68518 7402 LTVRRHVP True NCI_RA007_Epitope_Rep2 976.59303270972 976.59192993586 33.417 2 -0.30778752023050976 0.07798823360596929 0.9438714419765777 ['ENSG00000164967|ENST00000378959|RPP25L'] 952 5832 ADYLQKNL True NCI_RA007_Epitope_Rep3 963.50254593947 963.50144993586 29.92 2 -0.30780792474607566 0.07798823360596929 0.9438714419765777 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENST00000471988.1_1_2:207621575-207629995:-|nuORF', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 44427 19125 INIKGGYPSI True PC9_epitope_Rep4 1060.59169529704 1060.5905899358602 81.657 2 -0.30781102580893355 0.07798823360596929 0.9438714419765777 ['nc|ENSG00000132259|Q8IV77-2|CNGA4'] 77266 8144 NYIPVKNGKQF True PC9_epitope_Rep2 1306.70337100434 1306.70173490379 36.683 3 -0.3078849298292843 0.0780033719553754 0.9438714419765777 ['ENSG00000095951|ENST00000379388|HIVEP1', 'HIVEP1|p.E539Kfs*3|1|0.36|ENSG00000095951|chr6:12121410-12121410|G/-|frameshift_variant'] 46670 10103 ITVNDLPVGR True NCI_RA007_Epitope_Rep2 1082.6084079903399 1082.60730993586 43.886 2 -0.3079032263993202 0.0780033719553754 0.9438714419765777 ['ENSG00000167815|ENST00000301522|PRDX2', 'ENST00000498785.1_1_19:12910655-12911052:-|nuORF', 'ENST00000466174.5_1_19:12907897-12910877:-|nuORF', 'ENSG00000117450|ENST00000319248|PRDX1'] 109095 6203 TFFPRVYYRPP True H1975_Epitope_Rep3 1441.7506555499297 1441.7490149037899 28.873 3 -0.3079562626970369 0.07803784413953906 0.9438714419765777 ['ENST00000469074.1_1_1:156697530-156698223:-|nuORF'] 77007 15829 NVTLAQPAMSL True PC9_epitope_Rep2 1143.59579470131 1143.59468993586 66.145 2 -0.3079654325309024 0.07805437979768994 0.9438714419765777 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 25090 13659 FDIAEGVRTVL True NCI_RA007_Epitope_Rep4 1218.66083748602 1218.6597499358602 59.76 2 -0.30797731461400063 0.07807091486270783 0.9438714419765777 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 115764 19032 TVLQSQLLT True PC9_epitope_Rep6 1001.5757108797299 1001.57517496793 85.849 1 -0.3080309441138151 0.07810538398077406 0.9438714419765777 ['ENST00000406641.5_1_7:50772961-50823704:-|nuORF', 'ENST00000403097.5_1_7:50778658-50860317:-|nuORF'] 3224 15126 AGEYIALYQ True H1975_Epitope_Rep3 1026.5022115862998 1026.50110993586 63.582 2 -0.3081498227250883 0.0781398518624796 0.9438714419765777 ['ENST00000304813.13_1_12:100550719-100551143:-|nuORF'] 31595 6362 GEFVSDRK True NCI_RA007_Epitope_Rep2 936.4664947839199 936.46538993586 29.352 2 -0.30818984706945013 0.07815217976077327 0.9438714419765777 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 6025 21292 APLNLGMIAA True PC9_epitope_Rep5 969.5317378927699 969.53064993586 86.953 2 -0.3082092471050397 0.07815217976077327 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF'] 96112 6476 SEDSM[Oxidation]EKVK True H1975_Epitope_Rep3 1067.4804905459898 1067.4793899358601 29.878 2 -0.3082376162764722 0.07815217976077327 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'ENST00000503417.1_1_5:137515369-137517456:+|nuORF'] 19174 11477 ELKFHYMV True PC9_epitope_Rep2 1065.53173789277 1065.53064993586 49.464 2 -0.3082526231868794 0.07815217976077327 0.9438714419765777 ['ENSG00000167515|ENST00000696289|TRAPPC2L', 'nc|ENSG00000167515|Q9UL33|TRAPPC2L', 'ENST00000564547.1_1_16:88923507-88925305:+|nuORF', 'ENST00000561840.1_2_16:88923580-88926055:+|nuORF'] 5093 13191 ALLRVWGRIA True H1975_Epitope_Rep3 1153.70839681513 1153.7072899358602 55.991 2 -0.30833331523221696 0.07816450589058045 0.9438714419765777 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 100236 8595 SLLPASNHPSP True H1975_Epitope_Rep2 1118.57202248162 1118.57092993586 38.015 2 -0.3083449161531633 0.07816450589058045 0.9438714419765777 ['ENST00000377474.3_1_13:77458945-77459041:-|nuORF'] 16930 8118 EGEAQRYFD True H1975_Epitope_Rep3 1113.47270236317 1113.4716099358602 36.203 2 -0.30835814596207095 0.07816450589058045 0.9438714419765777 ['ENSG00000176853|ENST00000334705|FAM91A1'] 135402 10527 YDPELIKEEK True H1975_Epitope_Rep3 1262.6394333350997 1262.6383299358602 45.558 2 -0.3083639324366496 0.07816450589058045 0.9438714419765777 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 96989 11498 SEVM[Oxidation]EELEKVK True H1975_Epitope_Rep1 1335.6591831839498 1335.65808993586 49.211 2 -0.3084955397934697 0.07817963384676074 0.9438714419765777 ['ENSG00000114446|ENST00000264538|IFT57'] 6505 13425 APTPGLLQ True PC9_epitope_Rep5 795.4490538146299 795.44794993586 56.655 2 -0.3085481370091293 0.07817963384676074 0.9438714419765777 ['ENSG00000021762|ENST00000263650|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5', 'ENST00000498536.5_1_11:3109437-3111932:-|nuORF'] 101101 8476 SLVCSFFHVP True NCI_RA007_Epitope_Rep2 1134.55320161334 1134.55210993586 37.614 2 -0.3086889935362133 0.07819616281154743 0.9438714419765777 ['ENST00000013070.10_1_14:93693825-93693894:+|nuORF'] 95231 5865 SACRVFKLWP True H1975_Epitope_Rep2 1205.6379342968098 1205.63629490379 27.545 3 -0.30871715231412833 0.07821269118359003 0.9438714419765777 ['ENSG00000007541|ENST00000321878|PIGQ', 'nc|ENSG00000007541|Q9BRB3|PIGQ', 'nc|ENSG00000007541|Q9BRB3-3|PIGQ'] 26832 19382 FLELVDYILEK True PC9_epitope_Rep5 1380.7540691645197 1380.75241490379 79.598 3 -0.30878373875766385 0.07822080390117968 0.9438714419765777 ['ENSG00000182810|ENST00000332395|DDX28'] 119325 19395 VELSPVPID True PC9_epitope_Rep6 967.5226126777098 967.5220649679301 87.256 1 -0.3087996565581871 0.07822080390117968 0.9438714419765777 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2'] 90360 6451 RIIPRHLQL True NCI_RA007_Epitope_Rep3 1144.719295852 1144.7176649037901 32.401 3 -0.3088368128582498 0.07822080390117968 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 45584 15621 ISGLVQGISV True PC9_epitope_Rep3 971.56514619603 971.56404993586 65.234 2 -0.3088790612422928 0.07822080390117968 0.9438714419765777 ['ENSG00000056291|ENST00000308744|NPFFR2', 'nc|ENSG00000056291|Q9Y5X5-3|NPFFR2', 'nc|ENSG00000056291|Q9Y5X5|NPFFR2'] 119818 9533 VEVLFNELE True NCI_RA007_Epitope_Rep1 1090.55464108198 1090.55354993586 41.078 2 -0.30898668371111143 0.07822080390117968 0.9438714419765777 ['ENSG00000128641|ENST00000392318|MYO1B', 'nc|ENSG00000128641|O43795-2|MYO1B'] 83830 10063 QEFNRLLEA True NCI_RA007_Epitope_Rep3 1118.5720224816198 1118.57092993586 46.676 2 -0.3090133810970939 0.07822080390117968 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 30245 19078 GAAFATGLF True PC9_epitope_Rep6 853.4334037504899 853.4328549679301 86.029 1 -0.30901680923384767 0.07822080390117968 0.9438714419765777 ['ENSG00000165644|ENST00000372538|COMTD1', 'ENST00000491270.1_1_10:76995548-76995725:-|nuORF', 'ENST00000469299.1_2_10:76995129-76995674:-|nuORF'] 4312 19884 AILIGSSLPVV True PC9_epitope_Rep6 1067.65904658087 1067.6579499358602 89.14 2 -0.30906710298423834 0.07825525735491852 0.9438714419765777 ['SACS|p.L1201V|1|0.41|ENSG00000151835|chr13:23340275-23340275|G/C|missense_variant'] 28610 7242 FSQYSIDP True NCI_RA007_Epitope_Rep2 955.4287122928699 955.42760993586 32.789 2 -0.3091987296475191 0.07828970957332378 0.9438714419765777 ['ENSG00000243156|ENST00000441493|MICAL3', 'nc|ENSG00000243156|Q7RTP6-2|MICAL3', 'nc|ENSG00000243156|Q7RTP6-4|MICAL3', 'nc|ENSG00000243156|Q7RTP6-3|MICAL3', 'nc|ENSG00000243156|Q7RTP6-5|MICAL3'] 102610 20068 SQAPFIVAL True PC9_epitope_Rep6 944.5331177917599 944.53256496793 89.86 1 -0.3092375200912389 0.07830482951489728 0.9438714419765777 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 99093 13776 SLADYQCLP True PC9_epitope_Rep2 1008.4586325221599 1008.45752993586 58.274 2 -0.3092375214741809 0.07830482951489728 0.9438714419765777 ['ENSG00000149548|ENST00000344762|CCDC15'] 67999 21139 LTLWIFWTIP True PC9_epitope_Rep1 1288.7219811905998 1288.7208899358602 86.141 2 -0.30933793924704034 0.07831994837229313 0.9438714419765777 ['ENST00000608279.1_1_2:133104517-133104757:-|nuORF'] 24769 16617 FAYEGPMYL True H1975_Epitope_Rep1 1089.4841189940098 1089.48302993586 69.294 2 -0.3093823021148018 0.07831994837229313 0.9438714419765777 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'RNF145|p.P393Lfs*7|1|0.15|ENSG00000145860|chr5:159163023-159163023|G/-|frameshift_variant'] 36236 5569 GVGERRWR True NCI_RA007_Epitope_Rep5 1014.5471451464598 1014.54604993586 28.106 2 -0.3094182568267911 0.07835439634310298 0.9438714419765777 ['ENST00000472593.1_1_3:183521362-183521560:+|nuORF'] 16169 19942 EEESEFPSTSI True PC9_epitope_Rep4 1253.52994245577 1253.52884993586 84.843 2 -0.30959850169797576 0.07838884307890868 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34'] 44176 9438 ILQTSEVSLP True H1975_Epitope_Rep3 1085.59684024713 1085.59574993586 41.305 2 -0.3096577958926818 0.07840395784039579 0.9438714419765777 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'AFF2|p.P472Nfs*24|2|0.14|ENSG00000155966|chrX:148953596-148953596|C/AA|frameshift_variant', 'nc|ENSG00000155966|P51816-4|AFF2'] 90268 2745 RHRFRYIP True H1975_Epitope_Rep2 1143.6413798844699 1143.63973490379 14.597 3 -0.30969002930555656 0.07840395784039579 0.9438714419765777 ['nc|ENSG00000101773|Q99708-2|RBBP8', 'ENSG00000101773|ENST00000327155|RBBP8'] 43364 10628 IHLRESVNQDK True NCI_RA007_Epitope_Rep2 1337.7051619094898 1337.7040699358602 45.94 2 -0.30971300758804376 0.07841626039575567 0.9438714419765777 ['ENSG00000171467|ENST00000361428|ZNF318'] 83884 16589 QEIAVQNPL True PC9_epitope_Rep2 1010.5396597241798 1010.53856993586 69.048 2 -0.30971530826375254 0.07841626039575567 0.9438714419765777 ['ENSG00000167770|ENST00000538426|OTUB1', 'ENST00000536443.1_1_11:63753967-63757776:+|nuORF', 'ENST00000301453.7_1_11:63753886-63764121:+|nuORF', 'OTUB1|p.E202Cfs*?|1|0.18|ENSG00000167770|chr11:63997230-63997231|GA/T|frameshift_variant'] 79689 14973 PHLKKTQSL True PC9_epitope_Rep1 1050.61857875122 1050.61748993586 62.414 2 -0.309715326250906 0.07841626039575567 0.9438714419765777 ['ENST00000283351.8_1_18:29410335-29410500:-|nuORF'] 47799 22305 IYQYFEIF True PC9_epitope_Rep2 1121.5433481222897 1121.5422499358601 91.275 2 -0.3097330267961931 0.07841626039575567 0.9438714419765777 ['nc|ENSG00000058262|P61619-3|SEC61A1', 'ENSG00000058262|ENST00000243253|SEC61A1', 'ENST00000498837.1_1_3:127786720-127788502:+|nuORF', 'nc|ENSG00000065665|Q9H9S3-3|SEC61A2', 'ENSG00000065665|ENST00000298428|SEC61A2'] 19350 9632 ELNGHYTL True PC9_epitope_Rep4 945.4555957470501 945.45448993586 44.673 2 -0.30984603123018356 0.0784327783055222 0.9438714419765777 ['UBAP1|p.H317Y|1|0.15|ENSG00000165006|chr9:34241974-34241974|C/T|missense_variant'] 57009 7539 LEEEKGKYQ True H1975_Epitope_Rep1 1122.5557037111398 1122.55460993586 33.993 2 -0.3099407714969693 0.07848514177151665 0.9438714419765777 ['nc|ENSG00000186714|Q6ZRK6-2|CCDC73', 'ENSG00000186714|ENST00000335185|CCDC73'] 90841 4868 RKVNPAAAL True NCI_RA007_Epitope_Rep4 938.5661492555398 938.56504993586 25.172 2 -0.3100246002311581 0.07850025091404401 0.9438714419765777 ['nc|ENSG00000156697|Q9BVJ6-2|UTP14A', 'nc|ENSG00000156697|Q9BVJ6-3|UTP14A', 'ENSG00000156697|ENST00000394422|UTP14A'] 124570 7144 VLGQKQPT True NCI_RA007_Epitope_Rep5 869.49706663621 869.49596993586 34.155 2 -0.3100783051927639 0.07850025091404401 0.9438714419765777 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16', 'nc|ENSG00000039319|Q7Z3T8-3|ZFYVE16', 'ENST00000510995.1_1_5:79729945-79735859:+|nuORF'] 33459 17256 GLGLWGVLL True PC9_epitope_Rep5 926.5589386167799 926.55784993586 71.387 2 -0.3101008600542869 0.07851676613437998 0.9438714419765777 ['ENST00000261275.4_2_15:29413103-29413565:-|nuORF'] 131677 23869 VWLRWFLWRLL True PC9_epitope_Rep4 1586.92380931498 1586.9227099358602 100.25 2 -0.31012095784572563 0.07853046594982079 0.9438714419765777 ['ENST00000264649.10_1_17:40610912-40612943:+|nuORF'] 46216 6962 ITDNPGLQ True PC9_epitope_Rep6 856.42904664604 856.4279499358599 35.731 2 -0.3101213489695419 0.07853046594982079 0.9438714419765777 ['ENSG00000150261|ENST00000279783|OR8K1'] 14195 17522 DSTLIMQLLR True H1975_Epitope_Rep1 1188.6536439305999 1188.6525499358602 72.898 2 -0.3101543250045467 0.07853046594982079 0.9438714419765777 ['ENSG00000134308|ENST00000238081|YWHAQ', 'YWHAZ|p.K212T|1|0.4|ENSG00000164924|chr8:100923998-100923998|T/G|missense_variant', 'ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'nc|ENSG00000164924|P63104-2|YWHAZ', 'ENST00000399764.3_1_9:34922183-34922564:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENST00000479421.5_2_20:43531717-43535076:+|nuORF', 'ENSG00000170027|ENST00000307630|YWHAG', 'nc|ENSG00000175793|P31947-2|SFN', 'ENSG00000175793|ENST00000339276|SFN'] 111108 10984 TLEKCCAAADP True H1975_Epitope_Rep2 1120.4892810274398 1120.4881899358602 47.276 2 -0.3102044368692816 0.07854697944481281 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 124236 12896 VLAVREPLL True PC9_epitope_Rep4 1008.6331661861999 1008.63206993586 57.483 2 -0.31021695803999155 0.07856208447574503 0.9438714419765777 ['ENST00000273308.8_2_12:56709793-56710018:-|nuORF'] 31496 9477 GEEPARAVHP True H1975_Epitope_Rep3 1061.52540664237 1061.5243099358602 41.458 2 -0.31022060436508386 0.07856208447574503 0.9438714419765777 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000534164.5_1_16:15012355-15014181:+|nuORF', 'ENST00000525846.6_1_16:18443548-18445649:-|nuORF', 'ENST00000343738.10_1_16:15227887-15231353:-|nuORF', 'ENST00000532739.1_1_16:16450692-16458759:+|nuORF', 'ENST00000532415.5_1_16:18480742-18495490:-|nuORF'] 132460 16174 VYNSEYYHF True PC9_epitope_Rep5 1220.5138388991602 1220.5132749679299 67.204 1 -0.31039880581022383 0.07861302750649583 0.9438714419765777 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'ENST00000487673.5_1_6:43111066-43128616:+|nuORF'] 15820 17222 EDKHCLSYL True PC9_epitope_Rep3 1106.50664534374 1106.50554993586 71.398 2 -0.310413656473256 0.07861302750649583 0.9438714419765777 ['nc|ENSG00000196557|O95180-2|CACNA1H', 'ENSG00000196557|ENST00000348261|CACNA1H'] 93521 5222 RSMWRWRTRPS True NCI_RA007_Epitope_Rep2 1517.7786187166098 1517.77696490379 24.932 3 -0.3104424043848485 0.07862672018348624 0.9438714419765777 ['ENST00000330978.3_1_16:29465045-29465621:-|nuORF', 'ENST00000568556.1_3_16:29458291-29465582:-|nuORF'] 126808 13225 VPSSIQSI True PC9_epitope_Rep4 829.45453311789 829.45342993586 58.765 2 -0.3104492386812315 0.07862672018348624 0.9438714419765777 ['ENST00000452138.3_1_22:32871295-32879887:+|nuORF'] 109749 2689 THHKDHFTK True NCI_RA007_Epitope_Rep2 1149.5679401606901 1149.56629490379 14.685 3 -0.31047556220511807 0.07862672018348624 0.9438714419765777 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000551620.5_1_12:69979244-69983508:+|nuORF'] 4742 9303 ALEATKLA True PC9_epitope_Rep1 815.4752685624699 815.47416993586 40.638 2 -0.31053516685829263 0.07863759339222046 0.9438714419765777 ['ENSG00000187134|ENST00000380872|AKR1C1', 'chr10:4968944-4969675|317|31.41|0.67|5.55|+|ENST00000380859|AKR1C1,AKR1C1', 'chr10:4963893-4965914|317|27.99|0.97|4.85|+|ENST00000380859|AKR1C1,AKR1C1', 'ENST00000477661.1_1_10:5005492-5009304:+|nuORF'] 74598 19332 NLDPLVYLL True PC9_epitope_Rep6 1058.60119735158 1058.60010993586 87.009 2 -0.31053529396855256 0.07863759339222046 0.9438714419765777 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'TUBGCP2|p.S354Vfs*53|1|0.11|ENSG00000130640|chr10:133292653-133292654|-/C|frameshift_variant'] 3576 16159 AGPEELGLQV True PC9_epitope_Rep3 1011.5236753068699 1011.52256993586 67.301 2 -0.3105785559541038 0.07863759339222046 0.9438714419765777 ['ENSG00000146700|ENST00000275560|SSC4D'] 100244 19124 SLLPVSMNL True PC9_epitope_Rep6 972.5314035396001 972.53030993586 86.21 2 -0.3105920775430342 0.07863759339222046 0.9438714419765777 ['nc|ENSG00000138036|Q8TCX1-5|DYNC2LI1'] 59955 15521 LHLTEWQP True PC9_epitope_Rep1 1022.51853035678 1022.5174299358599 64.524 2 -0.31063380019469267 0.07863759339222046 0.9438714419765777 ['ENSG00000198633|ENST00000433050|ZNF534', 'nc|ENSG00000198633|Q76KX8|ZNF534'] 77295 15144 NYKDLNGNVF True PC9_epitope_Rep1 1182.5669371011797 1182.5658499358601 63.074 2 -0.31065283482627865 0.07865269192869301 0.9438714419765777 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 44283 11979 ILVSRDLP True PC9_epitope_Rep3 911.54401682863 911.54290993586 51.102 2 -0.3106992079850454 0.07865269192869301 0.9438714419765777 ['ENST00000417689.5_1_16:66968640-66968817:+|nuORF', 'ENST00000561697.5_1_16:66968640-66972065:+|nuORF'] 19806 9770 ELTMWEEDP True H1975_Epitope_Rep2 1148.46959112868 1148.4684899358601 42.567 2 -0.3107370586989952 0.07866919879604414 0.9438714419765777 ['KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion', 'ENSG00000086200|ENST00000325324|IPO11', 'nc|ENSG00000086200|Q9UI26-2|IPO11'] 18162 7892 EIPDRLQFRQP True NCI_RA007_Epitope_Rep1 1397.7415474182098 1397.7399149037901 34.691 3 -0.31077478478218085 0.07870362076070014 0.9438714419765777 ['ENSG00000108344|ENST00000264639|PSMD3', 'nc|ENSG00000108344|O43242-2|PSMD3', 'ENST00000415039.7_1_17:38140716-38152959:+|nuORF', 'ENST00000485835.1_1_17:38151035-38151804:+|nuORF', 'THRA-PSMD3|1|fusion'] 73709 11659 NGSQVVTF True PC9_epitope_Rep2 850.4184819623399 850.41793496793 50.178 1 -0.310865356532472 0.07873804149199183 0.9438714419765777 ['COL21A1|p.K457Qfs*3|1|0.28|ENSG00000124749|chr6:56164425-56164426|-/G|frameshift_variant', 'COL21A1|p.G506Efs*74|1|0.11|ENSG00000124749|chr6:56141810-56141810|C/-|frameshift_variant', 'COL21A1|p.A763Qfs*38|1|0.37|ENSG00000124749|chr6:56060960-56060960|C/-|frameshift_variant', 'nc|ENSG00000124749|Q96P44-3|COL21A1', 'ENSG00000124749|ENST00000244728|COL21A1'] 92246 4035 RQKNKNVEI True NCI_RA007_Epitope_Rep2 1127.64110510095 1127.63944490379 20.333 3 -0.3108868749778201 0.07877246098998548 0.9438714419765777 ['ENSG00000187715|ENST00000405109|KBTBD12'] 74691 18768 NLILDMFY True NCI_RA007_Epitope_Rep1 1027.50485443859 1027.5042749679299 77.145 1 -0.31094553519313484 0.07878755307142474 0.9438714419765777 ['MAGEE2|p.T357N|1|0.42|ENSG00000186675|chrX:75783982-75783982|G/T|missense_variant'] 106531 11907 SVVSGAVVAA True PC9_epitope_Rep4 858.4810822188999 858.47998993586 53.58 2 -0.3109723768840959 0.07878755307142474 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E'] 26509 19107 FISYHLYSF True PC9_epitope_Rep5 1175.56514619603 1175.56351490379 78.527 3 -0.31099079137054925 0.07880123244482659 0.9438714419765777 ['ENST00000376344.7_1_9:86554288-86554393:-|nuORF'] 67444 7936 LTEARALDAP True NCI_RA007_Epitope_Rep3 1055.56112344475 1055.56002993586 38.325 2 -0.3110194073589351 0.07880123244482659 0.9438714419765777 ['ENST00000303538.12_1_4:39978230-39979126:-|nuORF'] 80697 12760 PLPVPPPTG True PC9_epitope_Rep5 873.49600400705 873.49490993586 54.088 2 -0.31104525073026174 0.07880123244482659 0.9438714419765777 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 16911 10508 EGCQAPRFRLI True NCI_RA007_Epitope_Rep1 1288.6710253302397 1288.6699299358602 44.856 2 -0.3110750668291797 0.07881491034803947 0.9438714419765777 ['ENST00000520864.5_1_5:170395310-170632776:+|nuORF'] 98615 12676 SINSHATEWSP True H1975_Epitope_Rep2 1227.55201531303 1227.55090993586 53.859 2 -0.3110795081040285 0.07881491034803947 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 93135 19147 RRRRHRHLAV True NCI_RA007_Epitope_Rep3 1355.8235351934302 1355.82242993586 83.617 2 -0.3110901542158109 0.07881491034803947 0.9438714419765777 ['ENST00000589935.1_1_18:54318575-54318788:+|nuORF'] 46121 20475 ITAFDLTDV True PC9_epitope_Rep6 993.5018772331299 993.50132496793 91.475 1 -0.3112225940880846 0.0788257630032956 0.9438714419765777 ['ENSG00000100228|ENST00000263116|RAB36', 'nc|ENSG00000100228|O95755-2|RAB36'] 118027 17133 VATASPISL True PC9_epitope_Rep2 857.48583324617 857.48472993586 71.151 2 -0.31128218809661323 0.0788257630032956 0.9438714419765777 ['ENST00000416600.6_1_20:3846925-3847768:+|nuORF'] 117366 10086 VAATRPQLTTG True PC9_epitope_Rep6 1113.61422164677 1113.6131299358601 49.397 2 -0.31132141750252756 0.0788257630032956 0.9438714419765777 ['ENST00000443602.2_1:149673167-149673347:+|nuORF'] 65376 10407 LSEQIYEDP True H1975_Epitope_Rep3 1092.49752012868 1092.49642993586 45.088 2 -0.31133357393253347 0.0788257630032956 0.9438714419765777 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 79517 19483 PGQVALFQEV True PC9_epitope_Rep5 1086.57095985246 1086.5698699358602 79.994 2 -0.31133453879411827 0.0788257630032956 0.9438714419765777 ['nc|ENSG00000119522|Q8TEH3-5|DENND1A'] 29035 11743 FTLPRRPGP True H1975_Epitope_Rep3 1039.5926983565498 1039.59160993586 50.312 2 -0.31137942504725297 0.07884226174484624 0.9438714419765777 ['ENST00000397821.7_1_X:19854391-19905523:-|nuORF'] 27594 10437 FPSAAATAA True PC9_epitope_Rep1 805.39701824177 805.39592993586 45.033 2 -0.3114102445899768 0.07885734754186442 0.9438714419765777 ['ZFP36L1|p.L219Hfs*13|1|0.34|ENSG00000185650|chr14:68789883-68789896|GGCTGTCCAGCAGC/-|frameshift_variant', 'ENSG00000185650|ENST00000439696|ZFP36L1', 'ENST00000555997.1_1_14:69256252-69257717:-|nuORF'] 101054 9545 SLTNRQVI True PC9_epitope_Rep3 929.52942939365 929.52832993586 41.662 2 -0.3114129768818488 0.07885734754186442 0.9438714419765777 ['ENSG00000198633|ENST00000433050|ZNF534', 'nc|ENSG00000198633|Q76KX8|ZNF534'] 64105 14170 LQEDPPVGV True PC9_epitope_Rep5 952.4865615221598 952.48601496793 59.515 1 -0.31147063768135447 0.07887384483129165 0.9438714419765777 ['ENSG00000119048|ENST00000265339|UBE2B', 'ENST00000511807.1_1_5:133707262-133710155:+|nuORF'] 29015 15367 FTKEEWTL True PC9_epitope_Rep5 1052.51786165044 1052.51676993586 64.119 2 -0.3116487877137692 0.0789082508014399 0.9438714419765777 ['ENSG00000178150|ENST00000595607|ZNF114'] 57469 8174 LEKCFQTENP True H1975_Epitope_Rep2 1207.5543238121497 1207.5532299358601 36.392 2 -0.3118457646624371 0.07899496767492255 0.9438714419765777 ['ENSG00000081051|ENST00000395792|AFP'] 85386 5313 QLEEAEEEAQR True NCI_RA007_Epitope_Rep1 1330.60008770426 1330.59844490379 24.747 3 -0.3118561668433696 0.07899496767492255 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 53742 12283 KYELDFSHF True NCI_RA007_Epitope_Rep4 1184.55022440788 1184.54857490379 54.245 3 -0.31193288415939247 0.07908309455587392 0.9438714419765777 ['ENSG00000137462|ENST00000642700|TLR2'] 87566 10699 QTMKVILDTN True PC9_epitope_Rep4 1161.6063593850097 1161.6052699358602 48.906 2 -0.3119711297484606 0.07909958632545978 0.9438714419765777 ['ENSG00000104321|ENST00000262209|TRPA1'] 62111 16725 LLNSYTTP True PC9_epitope_Rep1 907.46509780159 907.46400993586 69.161 2 -0.31202482158201933 0.07913398517245085 0.9438714419765777 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF'] 48318 5786 KDREAFEA True NCI_RA007_Epitope_Rep3 964.4614094034798 964.46030993586 29.738 2 -0.31207542559149687 0.07916412992873259 0.9438714419765777 ['ENSG00000102096|ENST00000376509|PIM2'] 84360 11345 QGAGSVLF True NCI_RA007_Epitope_Rep5 777.40210362221 777.40100993586 50.29 2 -0.3120917257467618 0.07916412992873259 0.9438714419765777 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 132120 11722 VYIRGSKIRF True PC9_epitope_Rep1 1237.7295261825295 1237.72789490379 49.964 3 -0.31212946232503663 0.07916412992873259 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 130148 12287 VTRPQELDL True PC9_epitope_Rep6 1069.57677350889 1069.57566993586 58.647 2 -0.312138395363974 0.07916412992873259 0.9438714419765777 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 65824 5952 LSKGVGQANVP True H1975_Epitope_Rep3 1068.5927579262 1068.5916699358602 27.905 2 -0.3121795377377173 0.07919852454026179 0.9438714419765777 ['CHD7|p.G1233V|1|0.22|ENSG00000171316|chr8:60830497-60830497|G/T|missense_variant'] 101318 14272 SLYLNTQTL True PC9_epitope_Rep5 1051.55497543515 1051.5538699358601 59.901 2 -0.3122105794786232 0.07921501217590603 0.9438714419765777 ['ENST00000301454.8_1_19:6441086-6441584:-|nuORF'] 122047 14412 VGQSACVWCVP True H1975_Epitope_Rep2 1147.5154362056298 1147.5143299358601 60.587 2 -0.3123636975770855 0.07928379588182632 0.9438714419765777 ['ENST00000518067.5_1_8:25309047-25315927:-|nuORF'] 88094 17276 QVVSFLHTV True PC9_epitope_Rep2 1028.5654805492 1028.5643899358602 71.71 2 -0.31239431025895054 0.07928379588182632 0.9438714419765777 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'ATRX|p.L1613F|1|0.32|ENSG00000085224|chrX:77633683-77633683|C/A|missense_variant', 'ATRX|p.L1612V|1|0.48|ENSG00000085224|chrX:77633688-77633688|G/C|missense_variant'] 100720 8044 SLRGTGVL True PC9_epitope_Rep1 801.4708518883699 801.46974993586 35.763 2 -0.31242538676032955 0.07930028110508316 0.9438714419765777 ['ENSG00000163395|ENST00000335211|IGFN1'] 113047 15740 TPVITSTQV True PC9_epitope_Rep4 944.5178616504401 944.51676993586 68.468 2 -0.3124794997066171 0.07930824590926994 0.9438714419765777 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'ENSG00000169876|ENST00000306151|MUC17'] 108293 6198 TECVWIIELNP True H1975_Epitope_Rep1 1315.6482241969898 1315.6471299358602 28.911 2 -0.3124993024957797 0.07930824590926994 0.9438714419765777 ['nc|ENSG00000286135|A0A494C103|SPADH'] 121731 5054 VGLRHEKYF True PC9_epitope_Rep6 1147.61382772395 1147.61218490379 27.08 3 -0.31250764291364713 0.07930824590926994 0.9438714419765777 ['MRC1|p.P559H|1|0.08|ENSG00000260314|chr10:17863575-17863575|C/A|missense_variant'] 123841 20013 VIVTETIQPLF True H1975_Epitope_Rep3 1258.71728973298 1258.71618993586 83.763 2 -0.3125180668938176 0.07930824590926994 0.9438714419765777 ['ENSG00000179941|ENST00000650064|BBS10'] 38087 7634 HENIMQRER True PC9_epitope_Rep1 1211.5829386018302 1211.5813049037902 34.186 3 -0.3125400594826432 0.07930824590926994 0.9438714419765777 ['ENST00000425936.1_1_7:91509508-91509559:-|nuORF'] 131606 14426 VVYGGGAAEI True PC9_epitope_Rep2 934.4759968384599 934.47488993586 60.759 2 -0.3125577836177641 0.07930824590926994 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 29797 14597 FVTFDEHD True PC9_epitope_Rep2 1008.4188758851599 1008.41776993586 61.416 2 -0.31263305620610843 0.07930824590926994 0.9438714419765777 ['ENST00000411735.2_1_1:191115527-191115704:-|nuORF'] 85488 17140 QLIDIIHTA True PC9_epitope_Rep6 1022.5760452329 1022.57494993586 78.514 2 -0.3127736022848356 0.0793233082706767 0.9438714419765777 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 81570 23397 PRIRYRKKKRI True PC9_epitope_Rep6 1512.9841181557597 1512.98248490379 103.1 3 -0.31278289412749727 0.0793233082706767 0.9438714419765777 ['nc|ENSG00000079263|Q13342-3|SP140', 'nc|ENSG00000079263|Q13342-6|SP140', 'nc|ENSG00000079263|Q13342-5|SP140', 'ENSG00000079263|ENST00000392045|SP140'] 111385 19271 TLIVKNENV True PC9_epitope_Rep3 1028.5866099165999 1028.58550993586 79.347 2 -0.3128587042053057 0.07933978983548451 0.9438714419765777 ['GINM1|p.L98V|1|0.08|ENSG00000055211|chr6:149578836-149578836|C/G|missense_variant'] 109049 22207 TFAELSLGL True PC9_epitope_Rep2 949.5120479940099 949.51094993586 90.902 2 -0.31294775268760217 0.07935627081021088 0.9438714419765777 ['nc|ENSG00000146463|Q5VZL5-3|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-2|ZMYM4', 'nc|ENSG00000146463|Q5VZL5-4|ZMYM4', 'ENSG00000146463|ENST00000314607|ZMYM4'] 103791 4667 SRFWRKWLCSK True NCI_RA007_Epitope_Rep2 1495.78705814199 1495.78540490379 22.78 3 -0.3129822845826756 0.07939065213110645 0.9438714419765777 ['ENST00000508941.5_1_5:35856265-35860978:+|nuORF'] 59104 10143 LGEGASLPP True NCI_RA007_Epitope_Rep4 839.4388830537499 839.43833496793 45.874 1 -0.31307933277475325 0.07940713160532722 0.9438714419765777 ['ENST00000313401.3_1_17:30816702-30816975:+|nuORF'] 107830 7749 TARCCDLP True H1975_Epitope_Rep2 877.3786083796499 877.37750993586 34.76 2 -0.31308758652277213 0.07942361048957308 0.9438714419765777 ['nc|ENSG00000143369|Q16610-2|ECM1', 'ENSG00000143369|ENST00000369047|ECM1', 'nc|ENSG00000143369|Q16610-4|ECM1'] 106245 7138 SVQAVLVGK True NCI_RA007_Epitope_Rep4 899.5440168286299 899.54290993586 34.075 2 -0.3131560713062874 0.07945372209991229 0.9438714419765777 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 54291 8259 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 41.365 3 -0.3131959256232587 0.07945372209991229 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 37718 16795 HARRVYEI True PC9_epitope_Rep6 1042.5672118846999 1042.5661099358601 77.108 2 -0.3132189289082725 0.07945372209991229 0.9438714419765777 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 70315 21385 LYPGIVTFVI True PC9_epitope_Rep6 1120.65323292444 1120.65212993586 95.13 2 -0.3132600255556853 0.07945372209991229 0.9438714419765777 ['ENSG00000188037|ENST00000343257|CLCN1'] 88808 22144 RDRKKRRRWRR True PC9_epitope_Rep1 1668.0145238505897 1668.0134299358601 89.991 2 -0.31329269339167304 0.07946593166645786 0.9438714419765777 ['ENST00000556594.1_1_14:91518767-91526894:-|nuORF'] 55959 12835 LDIDASGVVGL True NCI_RA007_Epitope_Rep3 1057.5655401188499 1057.56444993586 57.731 2 -0.31331120571510745 0.07946593166645786 0.9438714419765777 ['UBE2Q2-FBXO22|5|fusion', 'UBE2Q2-FBXO22|3|fusion', 'UBE2Q2-FBXO22|1|fusion', 'ENSG00000167196|ENST00000308275|FBXO22'] 88632 19920 RARHRRRPRL True NCI_RA007_Epitope_Rep5 1372.8500842944397 1372.8489899358601 83.536 2 -0.31335470177029323 0.07946593166645786 0.9438714419765777 ['ENST00000405135.5_1_22:50969739-50970123:-|nuORF'] 17442 4277 EHFRRSLGK True NCI_RA007_Epitope_Rep2 1128.6152247062798 1128.61357490379 21.276 3 -0.31344823217648654 0.07946593166645786 0.9438714419765777 ['nc|ENSG00000144560|Q14135-5|VGLL4', 'nc|ENSG00000144560|Q14135-6|VGLL4', 'nc|ENSG00000144560|Q14135-2|VGLL4', 'nc|ENSG00000144560|Q14135|VGLL4', 'nc|ENSG00000144560|Q14135-4|VGLL4', 'ENSG00000144560|ENST00000430365|VGLL4'] 40122 5150 HRDNAGYTAL True PC9_epitope_Rep2 1116.5312202987998 1116.53012993586 25.187 2 -0.3134900487799625 0.07947813948494013 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 134580 9095 WVVGHSYI True PC9_epitope_Rep4 959.48650195251 959.48540993586 42.57 2 -0.31349711290425036 0.07947813948494013 0.9438714419765777 ['ACSS3|p.G343C|1|0.11|ENSG00000111058|chr12:81152025-81152025|G/T|missense_variant', 'ACSS3|p.C352S|1|0.1|ENSG00000111058|chr12:81152053-81152053|G/C|missense_variant', 'nc|ENSG00000111058|Q9H6R3-2|ACSS3', 'ENSG00000111058|ENST00000548058|ACSS3'] 12065 11302 DIEKESEGQAP True PC9_epitope_Rep2 1201.54626122625 1201.54516993586 48.796 2 -0.31350829322873247 0.07947813948494013 0.9438714419765777 ['ENSG00000125482|ENST00000334270|TTF1'] 109444 6705 TGSGTPGPFTK True NCI_RA007_Epitope_Rep5 1048.5189242796 1048.5178299358602 32.463 2 -0.3135427177452516 0.07947813948494013 0.9438714419765777 ['ENST00000506427.1_1_1:203188704-203191431:-|nuORF', 'ENST00000484834.5_1_1:203182159-203191449:-|nuORF', 'nc|ENSG00000133063|Q13231-2|CHIT1', 'nc|ENSG00000133063|Q13231-3|CHIT1', 'nc|ENSG00000133063|Q13231-4|CHIT1', 'ENSG00000133063|ENST00000367229|CHIT1'] 129872 21691 VTLQLLTLV True PC9_epitope_Rep6 998.6375828603 998.63648993586 96.322 2 -0.31364096358446303 0.07949461326461219 0.9438714419765777 ['ENSG00000164815|ENST00000297431|ORC5', 'ENST00000477223.1_1_7:103767297-103805736:-|nuORF'] 110140 12915 TIDAHGLMVLP True H1975_Epitope_Rep2 1165.61653014589 1165.6154299358602 54.791 2 -0.3137250483210559 0.07950397251449431 0.9438714419765777 ['ENSG00000151640|ENST00000338492|DPYSL4'] 88919 3457 REDDRVAIHEA True H1975_Epitope_Rep2 1309.6374762724897 1309.6358249037899 18.102 3 -0.3137371029054203 0.07950397251449431 0.9438714419765777 ['ENST00000493076.5_1_22:35806581-35817581:+|nuORF', 'ENSG00000100297|ENST00000216122|MCM5'] 106308 20141 SVRRFFWW True PC9_epitope_Rep5 1182.6086827738598 1182.60758993586 82.52 2 -0.31379457131197963 0.07950397251449431 0.9438714419765777 ['ENSG00000165548|ENST00000298351|TMEM63C'] 19116 12938 ELIGAAKA True PC9_epitope_Rep3 771.44905381463 771.44794993586 54.79 2 -0.3138120053073526 0.07950397251449431 0.9438714419765777 ['nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENSG00000153721|ENST00000607772|CNKSR3'] 126862 19639 VPTLVTPSA True PC9_epitope_Rep1 883.50148331031 883.50038993586 80.366 2 -0.3138190066358024 0.07950397251449431 0.9438714419765777 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 65510 16559 LSFTAEHLV True PC9_epitope_Rep1 1015.53384606775 1015.53274993586 68.516 2 -0.31385032000412244 0.07950397251449431 0.9438714419765777 ['ENSG00000145283|ENST00000273905|SLC10A6'] 66032 11105 LSMTSNTI True PC9_epitope_Rep3 865.4215187374501 865.4204299358599 47.713 2 -0.3139075485286227 0.07952044376845308 0.9438714419765777 ['ENSG00000125686|ENST00000300651|MED1'] 65437 20422 LSEWLIDV True PC9_epitope_Rep1 973.5120479940099 973.51094993586 83.367 2 -0.31395918243156895 0.07953406813627255 0.9438714419765777 ['ENSG00000169371|ENST00000308588|SNUPN'] 124562 15055 VLGPPVIV True H1975_Epitope_Rep2 792.5109257952 792.51037496793 63.061 1 -0.314020885687627 0.07953406813627255 0.9438714419765777 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'ENSG00000085552|ENST00000368094|IGSF9', 'ENST00000476102.1_1_1:159900586-159913268:-|nuORF'] 20822 5874 EQPEKPSCP True H1975_Epitope_Rep2 1013.4487961144498 1013.44768993586 27.58 2 -0.3140698722355899 0.07953406813627255 0.9438714419765777 ['ENSG00000185477|ENST00000609438|GPRIN3'] 101357 7898 SMENSGHS True NCI_RA007_Epitope_Rep4 847.3130309176299 847.31192993586 37.114 2 -0.31408290989765136 0.07960421549857753 0.9438714419765777 ['ENSG00000080298|ENST00000617270|RFX3', 'nc|ENSG00000080298|P48380-3|RFX3', 'nc|ENSG00000080298|P48380-2|RFX3'] 7406 13714 ASAMPNIT True PC9_epitope_Rep5 803.38473930591 803.3841949679301 57.779 1 -0.3141355377854355 0.0796192589146732 0.9438714419765777 ['ENSG00000132874|ENST00000255226|SLC14A2', 'nc|ENSG00000132874|Q15849-2|SLC14A2'] 102513 8735 SPYVQKPLQGK True H1975_Epitope_Rep3 1243.6924719674696 1243.6913699358602 38.603 2 -0.3141421789342868 0.0796192589146732 0.9438714419765777 ['ENST00000162391.7_1_12:8185724-8186174:+|nuORF'] 121008 16175 VGFAFLGS True H1975_Epitope_Rep1 796.4119400299198 796.41139496793 67.563 1 -0.3142920370827505 0.0796343012541821 0.9438714419765777 ['ENST00000557789.5_1_15:64446168-64446417:+|nuORF'] 3405 13733 AGKEDIIEWLS True NCI_RA007_Epitope_Rep2 1259.63976768827 1259.6391749679299 58.064 1 -0.3142990844164721 0.0796343012541821 0.9438714419765777 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.R1248Pfs*56|1|0.39|ENSG00000205978|chr14:24415486-24415487|-/G|frameshift_variant', 'NYNRIN|p.D217*|1|0.16|ENSG00000205978|chr14:24408318-24408319|-/T|frameshift_variant'] 108204 9238 TEAAQIISA True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 40.49 2 -0.314350556801405 0.07964934251721979 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'chr2:86171336-86173650|143|10.86|0.41|4.71|-|2|None,IMMT|1'] 12382 7137 DKDDYLFQR True PC9_epitope_Rep5 1198.56185172074 1198.56019490379 32.422 3 -0.31438626670611697 0.07964934251721979 0.9438714419765777 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant', 'HMCN1|p.E3102Vfs*9|1|0.2|ENSG00000143341|chr1:186087585-186087586|AG/-|frameshift_variant', 'HMCN1|p.G1946Efs*22|1|0.29|ENSG00000143341|chr1:186038020-186038020|G/-|frameshift_variant', 'HMCN1-IGLL5|1|fusion'] 66540 13736 LSSGSENVP True PC9_epitope_Rep1 888.41887588516 888.41776993586 57.682 2 -0.31438954294078664 0.07966438270390182 0.9438714419765777 ['ENSG00000178163|ENST00000326756|ZNF518B'] 1855 4948 AEIEHKVIEA True H1975_Epitope_Rep3 1137.60298825673 1137.60133490379 24.16 3 -0.3143928726417661 0.07966438270390182 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11'] 100599 10328 SLQIAYEVP True NCI_RA007_Epitope_Rep3 1018.5335117145798 1018.53240993586 47.689 2 -0.3144350610026861 0.07967942181434373 0.9438714419765777 ['ENSG00000198018|ENST00000370489|ENTPD7'] 69103 13833 LVKMYSLGL True PC9_epitope_Rep1 1022.5834391124599 1022.58234993586 58.051 2 -0.3144488403536972 0.07967942181434373 0.9438714419765777 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 107488 12928 TAAGTLVVAV True PC9_epitope_Rep2 900.5280324113198 900.52692993586 55.022 2 -0.31445589468388774 0.07969303423848878 0.9438714419765777 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 108019 5636 TDDMIMDRVFR True H1975_Epitope_Rep1 1397.64315589989 1397.64151490379 26.747 3 -0.31445939777979953 0.07969303423848878 0.9438714419765777 ['ENSG00000034239|ENST00000262103|CLXN'] 121816 16118 VGNFSQACDP True PC9_epitope_Rep3 1036.4283950230397 1036.42728993586 67.148 2 -0.31446625561402985 0.07969303423848878 0.9438714419765777 ['nc|ENSG00000127952|Q9Y6J8-4|STYXL1', 'nc|ENSG00000127952|Q9Y6J8-2|STYXL1', 'ENSG00000127952|ENST00000359697|STYXL1', 'nc|ENSG00000127952|Q9Y6J8-3|STYXL1'] 63627 13553 LPMRLRYY True H1975_Epitope_Rep1 1110.6008205121 1110.59972993586 57.255 2 -0.31450645125334703 0.07970521947554825 0.9438714419765777 ['ENST00000378292.7_1_9:35690423-35690990:-|nuORF'] 113289 14256 TQHLEVVL True PC9_epitope_Rep6 937.5232813840498 937.52218993586 66.726 2 -0.3145299570755265 0.07970521947554825 0.9438714419765777 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 33935 12410 GMYLGEIVRQ True PC9_epitope_Rep4 1164.59612905448 1164.59502993586 55.54 2 -0.314540617861816 0.07970521947554825 0.9438714419765777 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000470920.1_1_10:71018680-71021051:+|nuORF'] 102804 21327 SQFLYLLVD True PC9_epitope_Rep1 1096.580461907 1096.57936993586 86.864 2 -0.3145721778909644 0.07970521947554825 0.9438714419765777 ['L1PB1_dup500|chr1:168563691-168564880:+|1.1704651704400395|0.014663390105224|6.32|469.0|59|2|anti-sense'] 128926 17604 VSTRWEIIAE True PC9_epitope_Rep6 1202.6295373577398 1202.62844993586 80.355 2 -0.31463248399775845 0.07972168064821937 0.9438714419765777 ['ENSG00000178913|ENST00000313368|TAF7'] 100569 16081 SLQAQTVLL True PC9_epitope_Rep5 971.5651461960299 971.56404993586 66.844 2 -0.314640965685787 0.07973671501904882 0.9438714419765777 ['ENSG00000157445|ENST00000474759|CACNA2D3', 'nc|ENSG00000157445|Q8IZS8-2|CACNA2D3', 'ENST00000478261.5_1_3:55107739-55108230:+|nuORF'] 89527 5063 RERLEQQVP True NCI_RA007_Epitope_Rep4 1153.62036965637 1153.61872490379 25.976 3 -0.3146544741898703 0.07973671501904882 0.9438714419765777 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 6119 8991 APNLQNQQV True PC9_epitope_Rep2 1010.5145076055 1010.51397496793 39.937 1 -0.314738644835292 0.0797474693278964 0.9438714419765777 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 41351 8938 IALYFHPFCL True PC9_epitope_Rep5 1222.62088725034 1222.6192349037901 39.324 3 -0.31475723686931834 0.0797474693278964 0.9438714419765777 ['ENSG00000078589|ENST00000171757|P2RY10'] 120615 5979 VGAGPAAAAAA True PC9_epitope_Rep4 825.4344663796498 825.43336993586 29.944 2 -0.3148230256730664 0.0797474693278964 0.9438714419765777 ['nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN'] 79477 5085 PGPRRQQGWR True NCI_RA007_Epitope_Rep4 1236.6588208537598 1236.65716490379 26.068 3 -0.31483620015552666 0.0797474693278964 0.9438714419765777 ['ENST00000513574.1_1_4:156588948-156618002:+|nuORF'] 56602 7433 LDWYSWVP True NCI_RA007_Epitope_Rep2 1064.49673228304 1064.49562993586 33.539 2 -0.3148574192565975 0.0797474693278964 0.9438714419765777 ['ENSG00000161905|ENST00000293761|ALOX15', 'nc|ENSG00000161905|P16050-2|ALOX15'] 132114 18982 VYIPNKVLI True PC9_epitope_Rep5 1057.65356727761 1057.6524699358602 78.04 2 -0.31489917556165664 0.07976392738978808 0.9438714419765777 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'ENST00000503063.5_1_17:48629318-48633020:+|nuORF', 'ENST00000511937.5_1_17:48628543-48633020:+|nuORF', 'ENST00000504334.5_1_17:48627490-48633020:+|nuORF'] 962 6045 AEAAAVAGL True NCI_RA007_Epitope_Rep5 771.41266830591 771.41156993586 29.933 2 -0.3149183994407954 0.07977467811158798 0.9438714419765777 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2', 'ENST00000372343.7_1_1:44412628-44412673:+|nuORF'] 69504 5421 LVSLESAERP True NCI_RA007_Epitope_Rep1 1099.5873381925899 1099.58624993586 25.159 2 -0.3149595880913233 0.07977467811158798 0.9438714419765777 ['OTOGL|p.I1956Lfs*19|1|0.11|ENSG00000165899|chr12:80356471-80356474|ATTG/-|frameshift_variant', 'ENSG00000165899|ENST00000547103|OTOGL'] 31626 4552 GEGQLGPAER True PC9_epitope_Rep3 1012.4937721609199 1012.49266993586 22.601 2 -0.31496319993858396 0.07977467811158798 0.9438714419765777 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 133504 6011 WHDAENQTV True PC9_epitope_Rep2 1098.47303671634 1098.47192993586 28.512 2 -0.3150031801087543 0.07977467811158798 0.9438714419765777 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 44934 13572 IQELIHGAHIG True NCI_RA007_Epitope_Rep2 1186.6458561282197 1186.64474993586 57.432 2 -0.31502652754577054 0.07977467811158798 0.9438714419765777 ['nc|ENSG00000077935|Q8NDV3-2|SMC1B', 'ENSG00000077935|ENST00000357450|SMC1B', 'SMC1B|p.I82Lfs*31|1|0.24|ENSG00000077935|chr22:45408764-45408764|T/-|frameshift_variant', 'SMC1B|p.L671*|1|0.2|ENSG00000077935|chr22:45383513-45383513|A/-|frameshift_variant'] 139105 12855 YSNMLGEENTY True H1975_Epitope_Rep1 1319.5339822903898 1319.53288993586 54.516 2 -0.31511128659857834 0.07981976182813003 0.9438714419765777 ['ENST00000551123.5_1_12:98989412-98995303:+|nuORF', 'ENST00000546766.5_1_12:98989476-98995303:+|nuORF', 'ENSG00000075415|ENST00000552981|SLC25A3', 'nc|ENSG00000075415|Q00325|SLC25A3'] 53533 17775 KVPEWVDTV True PC9_epitope_Rep3 1071.5600608155898 1071.5594749679299 73.572 1 -0.31516017891942866 0.07981976182813003 0.9438714419765777 ['RPS19-CEACAM5|3|fusion', 'RPS19-CEACAM5|2|fusion', 'RPS19-CEACAM5|1|fusion', 'ENSG00000105372|ENST00000598742|RPS19'] 80924 17910 PMKRRRRAKLC True NCI_RA007_Epitope_Rep4 1413.8285461144897 1413.8274499358602 77.513 2 -0.3151685059255325 0.07981976182813003 0.9438714419765777 ['ENSG00000109685|ENST00000508803|NSD2', 'nc|ENSG00000109685|O96028-6|NSD2', 'ENST00000508355.5_1_4:1902372-1920392:+|nuORF', 'nc|ENSG00000109685|O96028-5|NSD2', 'nc|ENSG00000109685|O96028-3|NSD2'] 78316 7335 PASPALTAA True PC9_epitope_Rep4 797.42831837005 797.4272299358599 35.544 2 -0.3151856462641295 0.07981976182813003 0.9438714419765777 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 55371 20250 LASNVIC[Carbamidomethyl]P True PC9_epitope_Rep1 872.44258881463 872.44203496793 82.72 1 -0.3153127325749707 0.07981976182813003 0.9438714419765777 ['OR9G1|p.A215Gfs*50|1|0.15|ENSG00000174914|chr11:56701027-56701028|-/T|frameshift_variant', 'ENSG00000174914|ENST00000642097|OR9G1'] 126270 11423 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 48.938 2 -0.31536726152965916 0.07981976182813003 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 112058 10600 TLTEHYDI True PC9_epitope_Rep3 990.46582607758 990.46472993586 45.72 2 -0.31539558210225194 0.07983050544420804 0.9438714419765777 ['nc|ENSG00000105058|Q9Y421-3|FAM32A', 'ENSG00000105058|ENST00000263384|FAM32A'] 58361 5043 LEVERQENE True NCI_RA007_Epitope_Rep2 1144.53603089572 1144.5349299358602 24.24 2 -0.3153961183232109 0.07983050544420804 0.9438714419765777 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'nc|ENSG00000020426|P51948-2|MNAT1', 'ENSG00000020426|ENST00000261245|MNAT1', 'ENST00000554641.1_1_14:61278722-61346563:+|nuORF'] 122435 12218 VGSKTNLVTI True NCI_RA007_Epitope_Rep2 1030.60225998074 1030.60116993586 52.125 2 -0.3154276040102678 0.07983050544420804 0.9438714419765777 ['ENSG00000148488|ENST00000377602|ST8SIA6'] 33324 19770 GLDQSLVSL True PC9_epitope_Rep3 930.5022115863 930.50110993586 81.273 2 -0.3154369322272852 0.07983050544420804 0.9438714419765777 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1'] 136640 7722 YIDKQTIS True PC9_epitope_Rep5 966.5022115863 966.50110993586 34.644 2 -0.31545042533472534 0.07983050544420804 0.9438714419765777 ['ENST00000340413.6_1_6:150047065-150047122:-|nuORF'] 63434 11465 LPGRSDVLV True PC9_epitope_Rep4 954.5498304850599 954.54872993586 51.863 2 -0.3154721911956008 0.07984552947276205 0.9438714419765777 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1', 'nc|ENSG00000100083|Q9UJY5-4|GGA1'] 5058 10697 ALLKQIQEA True PC9_epitope_Rep4 1012.5916952970399 1012.59058993586 48.898 2 -0.3154934635317629 0.07984552947276205 0.9438714419765777 ['ENST00000484795.5_1_12:6761826-6762560:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-8|ING4', 'ENST00000488381.5_1_12:6760363-6764813:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-3|ING4', 'nc|ENSG00000111653|Q9UNL4-4|ING4', 'nc|ENSG00000111653|Q9UNL4-7|ING4', 'nc|ENSG00000111653|Q9UNL4-5|ING4', 'nc|ENSG00000111653|Q9UNL4-6|ING4', 'ENSG00000111653|ENST00000341550|ING4', 'nc|ENSG00000111653|Q9UNL4|ING4'] 25814 9394 FGDGYNGY True H1975_Epitope_Rep1 891.33989728847 891.3393449679301 41.046 1 -0.31556585403146575 0.07986055242692411 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'ENST00000495810.1_1_7:26235422-26236427:-|nuORF', 'HNRNPA2B1|p.G237V|1|0.4|ENSG00000122566|chr7:26195894-26195894|C/A|missense_variant', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 77742 19043 PAAPHFLPV True PC9_epitope_Rep5 947.52288746123 947.5217899358599 78.277 2 -0.3156251020917874 0.07986055242692411 0.9438714419765777 ['nc|ENSG00000185504|Q0VG06-3|FAAP100', 'ENSG00000185504|ENST00000327787|FAAP100', 'C17orf70-NPLOC4|1|fusion'] 58560 21994 LFDWIQSEL True PC9_epitope_Rep1 1149.5706254992901 1149.5695299358601 89.421 2 -0.3156511940337597 0.07987557430680944 0.9438714419765777 ['nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 120932 12198 VGEIHMKTMP True PC9_epitope_Rep2 1141.56238639805 1141.56128993586 52.232 2 -0.3156580507212845 0.07987557430680944 0.9438714419765777 ['ENSG00000034053|ENST00000683413|APBA2', 'nc|ENSG00000034053|Q99767-2|APBA2', 'ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1'] 6421 12075 APSGNFVAC True PC9_epitope_Rep4 864.37998827864 864.37888993586 54.252 2 -0.31569677534921603 0.0799099002467017 0.9438714419765777 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3', 'ENST00000470354.1_1_7:100275135-100275402:+|nuORF', 'ENSG00000172354|ENST00000303210|GNB2', 'nc|ENSG00000172354|P62879-2|GNB2'] 61722 23928 LLILWELLIII True NCI_RA007_Epitope_Rep2 1350.8890465156999 1350.8874149037902 100.45 3 -0.3157847203808092 0.07996210157492983 0.9438714419765777 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|103|2|sense'] 106209 18086 SVPNKDVFQEL True PC9_epitope_Rep1 1274.65066672514 1274.6495699358602 74.362 2 -0.3159585765213652 0.08004719173429624 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 98909 17022 SIWQVYSVP True PC9_epitope_Rep1 1077.54949613189 1077.54838993586 70.299 2 -0.3160264595244739 0.08004719173429624 0.9438714419765777 ['ENST00000575643.1_1_17:4701246-4701714:+|nuORF'] 91369 15975 RMQNTLYLS True PC9_epitope_Rep3 1124.5648289261999 1124.56372993586 66.594 2 -0.3160418374181103 0.08004719173429624 0.9438714419765777 ['ENSG00000153012|ENST00000382114|LGI2'] 80275 7115 PLDSSNKNAVS True PC9_epitope_Rep1 1130.5567663403 1130.5556699358601 32.177 2 -0.3160932509438895 0.0800636362011333 0.9438714419765777 ['ENST00000570184.1_2_16:57212686-57219966:-|nuORF'] 15974 9924 EDWKLWRCRLR True NCI_RA007_Epitope_Rep2 1559.8143355189898 1559.81269490379 43.228 3 -0.3161308116482393 0.08007721731669824 0.9438714419765777 ['ENSG00000165197|ENST00000297904|VEGFD'] 135011 10043 YAGSGNVL True PC9_epitope_Rep4 779.38136817763 779.3808149679301 46.296 1 -0.3161370211662781 0.08007721731669824 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 59119 9160 LGEISALTSK True NCI_RA007_Epitope_Rep1 1017.57062549929 1017.56952993586 39.631 2 -0.3161923974778106 0.08007721731669824 0.9438714419765777 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 101186 18186 SLVSYQSLGQ True PC9_epitope_Rep6 1080.54513902744 1080.5440499358601 82.593 2 -0.3163329326902753 0.0800922284978909 0.9438714419765777 ['ENST00000426016.5_1_2:39262447-39262622:-|nuORF'] 100330 18371 SLMITC[Carbamidomethyl]VTI True PC9_epitope_Rep5 1036.52968956687 1036.52858993586 75.683 2 -0.31637059923813543 0.0800922284978909 0.9438714419765777 ['ENSG00000128519|ENST00000249284|TAS2R16'] 63817 20865 LPSSPIYASV True PC9_epitope_Rep2 1032.54916177872 1032.5480699358602 85.703 2 -0.3164757430122346 0.08016085790884718 0.9438714419765777 ['nc|ENSG00000095397|Q9P202-3|WHRN', 'nc|ENSG00000095397|Q9P202-4|WHRN', 'ENSG00000095397|ENST00000362057|WHRN'] 139985 16078 YVIYGIAAAF True PC9_epitope_Rep4 1086.5749826037397 1086.57388993586 69.778 2 -0.31649078140777603 0.08016085790884718 0.9438714419765777 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A'] 8424 5916 ATQYTSASP True H1975_Epitope_Rep3 924.4188758851599 924.41776993586 27.765 2 -0.31654189897038876 0.08019373748927652 0.9438714419765777 ['ENST00000369738.8_1_1:111889092-111889603:+|nuORF'] 100797 13962 SLRRWSYEMFR True PC9_epitope_Rep1 1529.7561519365297 1529.7544949037901 58.541 3 -0.316549174885827 0.08019373748927652 0.9438714419765777 ['ACACA|p.I174L|1|0.61|ENSG00000278540|chr17:37283357-37283357|T/G|missense_variant'] 2360 16555 AEQFAVGEI True PC9_epitope_Rep5 962.4709114580198 962.4703649679301 68.683 1 -0.3165808263100037 0.08022804854073955 0.9438714419765777 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF', 'ENSG00000100749|ENST00000216639|VRK1'] 81330 5488 PPRPPPPPP True PC9_epitope_Rep3 950.5337864980999 950.53268993586 26.184 2 -0.3166336992873978 0.08024305245286391 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 92122 15932 RPYRFYFYMWK True NCI_RA007_Epitope_Rep5 1655.8071248802296 1655.8060299358601 68.007 2 -0.3166375761921566 0.08024305245286391 0.9438714419765777 ['ENSG00000197106|ENST00000331565|SLC6A17'] 46434 7932 ITLLEQGKEPC True H1975_Epitope_Rep3 1229.6325741328499 1229.6314699358602 35.48 2 -0.31665420901608493 0.08025948959897063 0.9438714419765777 ['ENSG00000171817|ENST00000316433|ZNF540'] 100534 19069 SLPSWSCSLSI True PC9_epitope_Rep5 1178.56416021986 1178.56306993586 78.378 2 -0.31678375046635715 0.08029379702271387 0.9438714419765777 ['ENST00000320623.9_1_16:69752155-69760649:-|nuORF'] 85949 4945 QPATATAATAA True PC9_epitope_Rep3 972.4876241513199 972.48652993586 24.114 2 -0.3167955141223405 0.08030305737719565 0.9438714419765777 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'ENST00000359369.8_1_22:36140254-36146490:-|nuORF'] 41825 9978 IDSNDHQVMYI True H1975_Epitope_Rep2 1333.5972512532899 1333.59614993586 43.369 2 -0.31679868062495603 0.08030305737719565 0.9438714419765777 ['FRAS1|p.D2110N|1|0.07|ENSG00000138759|chr4:78450204-78450204|G/A|missense_variant'] 119823 15416 VEVNEEKDRV True PC9_epitope_Rep4 1215.60953018915 1215.6084299358602 67.229 2 -0.31679946021438815 0.08030305737719565 0.9438714419765777 ['ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 12681 8628 DLETM[Oxidation]RRQRNE True H1975_Epitope_Rep1 1462.6946742592197 1462.69356993586 38.114 2 -0.3168027498539447 0.08030305737719565 0.9438714419765777 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 78216 4076 PAPRRPWER True H1975_Epitope_Rep3 1163.6312091235898 1163.6301099358602 20.804 2 -0.31682147167640323 0.08030305737719565 0.9438714419765777 ['ENSG00000169418|ENST00000368680|NPR1'] 105264 10384 STTGGLTSV True PC9_epitope_Rep1 821.41306222873 821.4125149679301 44.826 1 -0.3168487886328222 0.08030305737719565 0.9438714419765777 ['nc|ENSG00000197965|O95297-2|MPZL1', 'ENST00000474729.5_1_1:167734818-167757155:+|nuORF', 'ENSG00000197965|ENST00000359523|MPZL1', 'nc|ENSG00000197965|O95297-3|MPZL1', 'ENST00000465787.5_1_1:167691238-167742606:+|nuORF', 'nc|ENSG00000197965|O95297-5|MPZL1', 'ENST00000464954.1_1_1:167691199-167735064:+|nuORF'] 116009 12390 TVQWENSF True PC9_epitope_Rep2 1009.4505103666099 1009.44940993586 52.966 2 -0.31695705611838815 0.08031949110142235 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 31412 19252 GEDFLSWNDL True H1975_Epitope_Rep1 1194.51931820242 1194.5187749679299 80.216 1 -0.31697834365200056 0.08037166085946573 0.9438714419765777 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.R772Pfs*13|1|0.15|ENSG00000183856|chr1:156544452-156544462|CCTATAACCCC/-|frameshift_variant'] 73125 8686 NEAIYDIC[Carbamidomethyl]R True H1975_Epitope_Rep3 1152.52335831647 1152.52226993586 38.409 2 -0.3170942541407071 0.08040021440057174 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 44264 19157 ILVFPTSSTI True PC9_epitope_Rep1 1076.6117620352802 1076.6106699358602 78.481 2 -0.3171105685372238 0.08040021440057174 0.9438714419765777 ['ENSG00000123066|ENST00000281928|MED13L'] 96113 7057 SEDSNNNVPR True NCI_RA007_Epitope_Rep1 1130.4952287129001 1130.4941299358602 31.445 2 -0.3171310201003447 0.08040021440057174 0.9438714419765777 ['ENSG00000111727|ENST00000229330|HCFC2', 'nc|ENSG00000111727|Q9Y5Z7-2|HCFC2'] 125127 19352 VLPNRPFGLF True PC9_epitope_Rep1 1158.6549642599398 1158.65386993586 79.242 2 -0.3171351667318406 0.08040021440057174 0.9438714419765777 ['ENSG00000005187|ENST00000289416|ACSM3'] 15378 7131 EALNKFVDP True H1975_Epitope_Rep2 1031.5287606873098 1031.52766993586 32.362 2 -0.31713672559619216 0.08040021440057174 0.9438714419765777 ['ENSG00000149654|ENST00000537909|CDH22'] 1623 6655 AEFVEVTK True NCI_RA007_Epitope_Rep4 921.4807478657299 921.47964993586 32.22 2 -0.31756013370333724 0.08059530828464741 0.9438714419765777 ['CON__P02769'] 17441 7258 EHFRKPVP True H1975_Epitope_Rep2 1008.5504991913998 1008.54940993586 32.852 2 -0.3175780642933562 0.08061029424901292 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5', 'ACSL5|p.P252S|1|0.21|ENSG00000197142|chr10:112410593-112410593|C/T|missense_variant', 'ENST00000495539.5_1_10:114169305-114171667:+|nuORF'] 17732 5874 EHSTEGSVSL True PC9_epitope_Rep6 1044.47236801 1044.4712699358602 30.838 2 -0.3176380428292524 0.08061029424901292 0.9438714419765777 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-2|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 45372 15288 ISDLPSSMSS True H1975_Epitope_Rep1 1022.4590264449802 1022.4584749679301 64.075 1 -0.3177120908496622 0.08062671954836174 0.9438714419765777 ['nc|ENSG00000277399|Q6PRD1|GPR179', 'ENSG00000277399|ENST00000616987|GPR179'] 101063 11681 SLTQFKEEFRR True NCI_RA007_Epitope_Rep2 1439.7521121019097 1439.75100993586 50.03 2 -0.31772826889482375 0.08064314426083073 0.9438714419765777 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2'] 124080 23754 VKRRRRWYFRV True PC9_epitope_Rep1 1620.9589660370798 1620.9578699358601 96.163 2 -0.31783114572083776 0.08067743318565099 0.9438714419765777 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 74077 10193 NHVANSPVSI True PC9_epitope_Rep1 1036.53015766964 1036.5290699358602 44.086 2 -0.31792479762884734 0.08072814319911394 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 101391 18827 SMYFELPDSF True PC9_epitope_Rep6 1234.5216267015396 1234.5205299358602 85.062 2 -0.3179435378544018 0.08072814319911394 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26'] 19584 9342 ELRERYHF True PC9_epitope_Rep5 1148.57269118796 1148.5710449037902 40.887 3 -0.3180212956495564 0.08081602029332428 0.9438714419765777 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128441244-128446479:+|nuORF', 'nc|ENSG00000128596|Q96JN2-3|CCDC136'] 130699 15425 VVDGNFEEV True PC9_epitope_Rep2 1006.46074069714 1006.46017496793 64.61 1 -0.3181314274658967 0.08083099623086404 0.9438714419765777 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 82705 13139 PVPKAALL True PC9_epitope_Rep4 807.5218248320699 807.52072993586 58.434 2 -0.3181583151935241 0.08083099623086404 0.9438714419765777 ['ENSG00000122641|ENST00000242208|INHBA', 'INHBA|p.G273Afs*86|1|0.09|ENSG00000122641|chr7:41690113-41690113|C/-|frameshift_variant'] 34865 7755 GQVGGQVSV True PC9_epitope_Rep6 829.42938099921 829.42883496793 39.19 1 -0.3182171706357199 0.08086527812511164 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727', 'ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 57195 9288 LEETPTAVST True PC9_epitope_Rep1 1046.5131701928199 1046.5120699358602 40.58 2 -0.31823449340875715 0.08087880682325622 0.9438714419765777 ['ENST00000316881.8_1_17:54968342-54968558:-|nuORF'] 99944 18819 SLIGLQQQF True PC9_epitope_Rep2 1032.56039516876 1032.55928993586 77.758 2 -0.31824523417776795 0.08087880682325622 0.9438714419765777 ['ENST00000421112.1_1_2:13142712-13143995:-|nuORF', 'ENST00000414661.1_1_2:13143779-13143995:-|nuORF'] 98525 12286 SILKEVDNP True H1975_Epitope_Rep3 1013.5393253710099 1013.53822993586 52.436 2 -0.3183060975855659 0.08087880682325622 0.9438714419765777 ['ENST00000413704.5_1_3:9487316-9517772:+|nuORF'] 79776 13004 PHVVRCVWLP True PC9_epitope_Rep3 1204.65391871412 1204.6522649037902 55.049 3 -0.3183752836678737 0.0809073048758707 0.9438714419765777 ['ENST00000442747.5_1_3:48538615-48541864:-|nuORF'] 93285 7495 RRRWHWHWPRP True NCI_RA007_Epitope_Rep5 1668.87629904228 1668.87520993586 35.512 2 -0.31837857881292647 0.0809073048758707 0.9438714419765777 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 9488 13732 AVYTETGL True PC9_epitope_Rep5 852.4228986364399 852.42180993586 57.843 2 -0.31845798649742113 0.0809073048758707 0.9438714419765777 ['ENST00000576313.1_1_17:55156597-55162272:-|nuORF'] 85388 6319 QLEEAEEEAQR True PC9_epitope_Rep1 1330.60008770426 1330.59844490379 29.118 3 -0.31849665832826646 0.0809073048758707 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 13621 11280 DPSVALLQ True NCI_RA007_Epitope_Rep4 841.4545331178899 841.4539849679301 50.282 1 -0.3185389475625985 0.0809073048758707 0.9438714419765777 ['nc|ENSG00000178773|Q9UBL6|CPNE7', 'ENSG00000178773|ENST00000319518|CPNE7'] 7569 8493 ASGFEDLLK True NCI_RA007_Epitope_Rep1 978.5022115862998 978.50110993586 37.037 2 -0.31864206306473125 0.08097729992320195 0.9438714419765777 ['nc|ENSG00000179873|P59045-3|NLRP11', 'nc|ENSG00000179873|P59045-2|NLRP11', 'ENSG00000179873|ENST00000589093|NLRP11'] 62356 23731 LLRLRLRLRRL True PC9_epitope_Rep5 1477.0205036644797 1477.01940993586 96.263 2 -0.31875645456339163 0.08102943277611087 0.9438714419765777 ['ENST00000234111.8_1_2:10588250-10588409:-|nuORF'] 57274 8366 LEGEGASLSSD True PC9_epitope_Rep1 1063.46694827639 1063.4658499358602 37.015 2 -0.3187810296978124 0.08104584501634132 0.9438714419765777 ['ENST00000571156.1_1_17:78181480-78183436:-|nuORF'] 35981 16446 GVAVVLALG True PC9_epitope_Rep4 797.5010893874899 797.5005449679301 71.227 1 -0.31881350006834525 0.08106225667035753 0.9438714419765777 ['nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 107263 21261 SYPTFFPRF True PC9_epitope_Rep3 1160.5654805491997 1160.5643899358602 87.074 2 -0.3188431718829705 0.0810786677381909 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'ENST00000481663.1_1_3:148801501-148804285:-|nuORF'] 74246 16997 NIDQDINNL True PC9_epitope_Rep1 1057.5040024914501 1057.5034749679298 70.202 1 -0.3189542112150124 0.08111293663833131 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 30636 15019 GALEPHINAQI True PC9_epitope_Rep1 1161.61422164677 1161.6131299358601 62.591 2 -0.31904419800275713 0.08112644868658368 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 66839 16498 LSVTESHWP True PC9_epitope_Rep3 1054.5083595959 1054.5072699358602 68.596 2 -0.31904787102700105 0.08112644868658368 0.9438714419765777 ['ENST00000311956.8_1_11:46699617-46699725:-|nuORF'] 77921 20359 PAIGAILE True PC9_epitope_Rep1 782.4538048419 782.45270993586 83.142 2 -0.319082385297779 0.08112644868658368 0.9438714419765777 ['MYEF2|p.G490A|1|0.53|ENSG00000104177|chr15:48149281-48149281|C/G|missense_variant'] 32776 6459 GIDDC[Carbamidomethyl]YTSAR True NCI_RA007_Epitope_Rep1 1156.48188742731 1156.48078993586 29.146 2 -0.3191137887939653 0.08115636662321661 0.9438714419765777 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000441047.1_1_17:51834352-51834658:-|nuORF', 'ENST00000438210.1_1_1:40428398-40429073:+|nuORF', 'ENST00000488906.1_1_17:45236559-45237015:-|nuORF'] 4784 8618 ALEKEKEKEEK True NCI_RA007_Epitope_Rep1 1359.7245599413898 1359.72346993586 37.522 2 -0.31918523357987344 0.08115636662321661 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'ENST00000493695.1_1_3:160132272-160134257:+|nuORF'] 93266 22827 RRRRVPGRE True PC9_epitope_Rep2 1180.7013543720798 1180.70024993586 93.294 2 -0.3192435130873966 0.08115636662321661 0.9438714419765777 ['ENST00000354336.7_1_22:21271864-21272434:+|nuORF'] 13504 7886 DPFEKERYREW True PC9_epitope_Rep1 1553.7262912768897 1553.7246449037898 35.161 3 -0.31924541255982103 0.08115636662321661 0.9438714419765777 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 8639 9301 AVAPPGVAA True PC9_epitope_Rep4 751.42283906679 751.42174993586 43.384 2 -0.3192880729725231 0.08116987465628682 0.9438714419765777 ['WNK2|p.S2101Rfs*23|1|0.26|ENSG00000165238|chr9:93300126-93300127|GT/-|frameshift_variant', 'ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2', 'WNK2|p.N1970Qfs*47|1|0.48|ENSG00000165238|chr9:93297934-93297935|-/C|frameshift_variant'] 95553 11378 SASDVFEHL True NCI_RA007_Epitope_Rep3 1003.46107505031 1003.45996993586 51.875 2 -0.3192903311955248 0.08116987465628682 0.9438714419765777 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF', 'ENST00000484926.1_1_2:202050494-202050848:+|nuORF'] 101890 12684 SPLHLAVEA True PC9_epitope_Rep4 935.5076313199099 935.50652993586 56.638 2 -0.3192987446824949 0.08116987465628682 0.9438714419765777 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 92089 22363 RPVDIVFLL True PC9_epitope_Rep5 1070.64881625034 1070.6477099358601 91.029 2 -0.31934431967617144 0.08120413519738603 0.9438714419765777 ['ENSG00000142173|ENST00000300527|COL6A2'] 14797 23087 DYATIFNNL True PC9_epitope_Rep1 1069.5080252427301 1069.50747496793 93.606 1 -0.3194117890458075 0.08123259301578233 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 60037 6900 LHRRRWYWCRD True NCI_RA007_Epitope_Rep5 1645.81606685449 1645.8144149037898 33.222 3 -0.3194168965245365 0.08123259301578233 0.9438714419765777 ['ENST00000399627.3_1_22:50905837-50906184:-|nuORF'] 9196 17607 AVPEKLQPLL True PC9_epitope_Rep5 1106.6699456177398 1106.6688499358602 72.734 2 -0.3194190438488184 0.08123259301578233 0.9438714419765777 ['ENSG00000179933|ENST00000319074|C14orf119'] 93637 7359 RTELLTEA True NCI_RA007_Epitope_Rep4 931.49746055903 931.49636993586 34.946 2 -0.3194345692857644 0.08123259301578233 0.9438714419765777 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 66099 17994 LSNPLSISLT True PC9_epitope_Rep4 1043.58627556343 1043.5851699358602 77.271 2 -0.319458061802411 0.08123259301578233 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 92818 6326 RRLKHKRKK True PC9_epitope_Rep3 1248.83672564608 1248.8356299358602 29.363 2 -0.3195364467148564 0.08126684876725046 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 140248 13529 YWRRREEEERW True NCI_RA007_Epitope_Rep2 1693.80733556225 1693.80622993586 57.266 2 -0.3195625245857045 0.08128325061591744 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 37486 14104 GYEPPVQESV True PC9_epitope_Rep2 1103.51350454599 1103.51297496793 59.525 1 -0.3196021112993051 0.08131750423993574 0.9438714419765777 ['ENSG00000145425|ENST00000274065|RPS3A'] 119990 7894 VFAIGQVK True NCI_RA007_Epitope_Rep1 860.51198842436 860.51088993586 34.698 2 -0.3197272754679129 0.08136815609547102 0.9438714419765777 ['ENST00000536573.6_1_12:1213918-1353789:+|nuORF'] 92577 2214 RRCHMVERLC True H1975_Epitope_Rep1 1301.6267350734497 1301.6250749037902 11.458 3 -0.31978747550110975 0.08136815609547102 0.9438714419765777 ['ENSG00000105708|ENST00000344099|ZNF14'] 24685 14846 FATLLRDGP True PC9_epitope_Rep1 988.5341804209199 988.53308993586 61.924 2 -0.3198536711243295 0.08139950017850768 0.9438714419765777 ['ENST00000216468.7_1_14:77805123-77805273:-|nuORF'] 129109 6506 VTAYYRER True NCI_RA007_Epitope_Rep5 1056.53524305008 1056.5341499358601 31.691 2 -0.31985659554206736 0.08139950017850768 0.9438714419765777 ['ENST00000587236.1_1_19:56666485-56666563:+|nuORF'] 76939 16868 NVPDSFNEV True PC9_epitope_Rep3 1019.45598966987 1019.4554749679301 70.038 1 -0.3198694711949269 0.08139950017850768 0.9438714419765777 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 603 8190 AASEQSETVQP True NCI_RA007_Epitope_Rep5 1145.5200464784098 1145.51894993586 38.185 2 -0.3198812129362533 0.08143374805876367 0.9438714419765777 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16', 'nc|ENSG00000172349|Q14005-3|IL16'] 32901 9598 GINEQQTL True PC9_epitope_Rep4 901.45051036661 901.44940993586 44.544 2 -0.31993540105414525 0.08144723689847208 0.9438714419765777 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B', 'ENST00000467042.1_1_2:99182504-99185377:+|nuORF', 'nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A'] 107888 19092 TATLWIAVF True NCI_RA007_Epitope_Rep3 1020.5644179200398 1020.56332993586 83.394 2 -0.31995910543322215 0.08144723689847208 0.9438714419765777 ['nc|ENSG00000140090|Q8NFF2-3|SLC24A4', 'ENSG00000140090|ENST00000532405|SLC24A4', 'ENST00000526482.1_1_14:92920194-92959969:+|nuORF', 'nc|ENSG00000140090|Q8NFF2-4|SLC24A4', 'nc|ENSG00000140090|Q8NFF2-2|SLC24A4'] 18724 13611 ELDKASYEI True PC9_epitope_Rep1 1066.5182555732601 1066.51714993586 57.21 2 -0.320058066762334 0.08144723689847208 0.9438714419765777 ['ENSG00000166938|ENST00000319212|DIS3L', 'DIS3L|p.K695Rfs*37|1|0.32|ENSG00000166938|chr15:66326243-66326243|A/-|frameshift_variant', 'nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 953 6019 ADYLQKNL True NCI_RA007_Epitope_Rep5 963.50254593947 963.50144993586 29.835 2 -0.3201259309251889 0.08146072429364414 0.9438714419765777 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'ENST00000471988.1_1_2:207621575-207629995:-|nuORF', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 96110 4901 SEDQIVTKAA True H1975_Epitope_Rep2 1060.540053647 1060.53894993586 23.935 2 -0.32012711750240497 0.08146072429364414 0.9438714419765777 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF', 'ENST00000483212.1_1_3:49315728-49316342:-|nuORF'] 109457 7093 TGTFNCSSDP True H1975_Epitope_Rep2 1027.3916751611498 1027.3905699358602 32.215 2 -0.3201403971787037 0.08146072429364414 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103', 'ENST00000463333.6_1_2:86831591-86842310:-|nuORF'] 78402 12460 PAVTTSGSV True PC9_epitope_Rep3 817.41814760917 817.41704993586 52.951 2 -0.3201587513578422 0.08147566438808475 0.9438714419765777 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'ENST00000470782.5_1_17:15935612-15971511:-|nuORF', 'ENST00000464381.5_1_17:15935612-15961439:-|nuORF'] 78835 6635 PEQPPRPEP True PC9_epitope_Rep3 1045.5192586327698 1045.5181699358602 30.544 2 -0.32018796487303064 0.08147566438808475 0.9438714419765777 ['ENSG00000198624|ENST00000355417|CCDC69'] 78342 8619 PATGFSFST True PC9_epitope_Rep4 913.41814760917 913.41704993586 40.635 2 -0.320204669138442 0.08150845067908837 0.9438714419765777 ['ENSG00000213024|ENST00000352066|NUP62'] 15052 11007 EAAGSAQLY True H1975_Epitope_Rep2 908.4239612655999 908.4234149679301 47.366 1 -0.32021725983920857 0.08150845067908837 0.9438714419765777 ['ENST00000453914.1_1_20:34064361-34064475:-|nuORF'] 86091 13484 QPQLPYSQA True PC9_epitope_Rep2 1030.5083595959 1030.5072699358602 57.15 2 -0.32026099222107973 0.08154268989149058 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 108717 11515 TEMLPPPPP True H1975_Epitope_Rep2 977.4892043744499 977.48810993586 49.35 2 -0.3203174897760973 0.0815740162398501 0.9438714419765777 ['ENSG00000155816|ENST00000319653|FMN2', 'FMN2|p.P1167Lfs*108|1|0.21|ENSG00000155816|chr1:240208308-240208308|C/-|frameshift_variant', 'FMN2|p.P914L|1|0.3|ENSG00000155816|chr1:240207553-240207553|C/T|missense_variant'] 109284 11965 TGDTIALNIIK True H1975_Epitope_Rep1 1157.66558851329 1157.66448993586 51.028 2 -0.3203451009172606 0.0815740162398501 0.9438714419765777 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 55356 10309 LASLKPAERTQ True NCI_RA007_Epitope_Rep2 1212.6826355597598 1212.68152993586 44.69 2 -0.32035846602690027 0.0815740162398501 0.9438714419765777 ['ENSG00000104142|ENST00000220509|VPS18'] 6559 13159 APVPVVVSS True PC9_epitope_Rep4 853.49091862661 853.48982993586 58.514 2 -0.3203767546663722 0.08159040616746377 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3'] 139142 12080 YSQRRFCP True NCI_RA007_Epitope_Rep3 1055.49708371955 1055.49598993586 54.637 2 -0.3204214343469903 0.08160388301004658 0.9438714419765777 ['ENSG00000118496|ENST00000237281|FBXO30', 'FBXO30|p.T563I|1|0.25|ENSG00000118496|chr6:145804718-145804718|G/A|missense_variant'] 25596 6354 FETARHNLI True NCI_RA007_Epitope_Rep2 1099.5774422152301 1099.5763499358602 29.321 2 -0.3204597858682907 0.08160388301004658 0.9438714419765777 ['ENSG00000127990|ENST00000648936|SGCE', 'nc|ENSG00000127990|O43556-3|SGCE', 'nc|ENSG00000127990|O43556-4|SGCE'] 16803 13935 EFLGAPVG True NCI_RA007_Epitope_Rep4 788.4068546494799 788.40630496793 60.877 1 -0.3204794659402735 0.08160388301004658 0.9438714419765777 ['nc|ENSG00000123411|Q9H2S9-2|IKZF4', 'ENST00000551124.5_1_12:56418779-56429112:+|nuORF', 'ENSG00000123411|ENST00000547167|IKZF4'] 68183 10336 LTQEQLHQL True PC9_epitope_Rep2 1108.58767254576 1108.58656993586 45.084 2 -0.3205350782043719 0.08161881479630985 0.9438714419765777 ['nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENSG00000204843|ENST00000628224|DCTN1'] 27402 9317 FNDGNAAVV True PC9_epitope_Rep6 905.4242956187699 905.42318993586 46.004 2 -0.32055351134512866 0.08161881479630985 0.9438714419765777 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 13795 8598 DQSVMVEMSGP True H1975_Epitope_Rep3 1178.4947603307 1178.49366993586 38.064 2 -0.3205853207961498 0.08163520216980122 0.9438714419765777 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 109285 11951 TGDTIALNIIK True H1975_Epitope_Rep3 1157.66558851329 1157.66448993586 51.125 2 -0.3207335333128655 0.08165158895847831 0.9438714419765777 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 101866 19182 SPLAVFGL True PC9_epitope_Rep6 802.45889022234 802.45778993586 86.436 2 -0.320831031576728 0.08170220358640379 0.9438714419765777 ['ATG4C|p.L211V|2|0.41|ENSG00000125703|chr1:62819241-62819241|C/G|missense_variant'] 59875 19200 LHGVTIAPSL True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 78.893 2 -0.3208686797411124 0.08170220358640379 0.9438714419765777 ['ENST00000345732.8_1_11:60235980-60236097:+|nuORF'] 9968 21226 AYSEAIFEL True PC9_epitope_Rep4 1041.50187723313 1041.5007899358602 89.811 2 -0.3209773231700668 0.08182418327475155 0.9438714419765777 ['nc|ENSG00000106608|Q8TCY9-3|URGCP', 'nc|ENSG00000106608|Q8TCY9-4|URGCP', 'nc|ENSG00000106608|Q8TCY9-2|URGCP', 'ENSG00000106608|ENST00000453200|URGCP'] 130371 8718 VTVETGFHHV True PC9_epitope_Rep5 1124.5614577979202 1124.55982490379 38.476 3 -0.3209842317724463 0.08182418327475155 0.9438714419765777 ['nc|ENSG00000168003|P08195-5|SLC3A2'] 66789 12736 LSVIDMGLSTV True PC9_epitope_Rep4 1133.60021137541 1133.59910993586 56.848 2 -0.32111761836810104 0.08184056522980303 0.9438714419765777 ['ENSG00000280094|ENST00000623530|OR1B1'] 65501 9439 LSFRRPFRREE True H1975_Epitope_Rep1 1491.8058790102698 1491.8042249037899 41.222 3 -0.32126514934149314 0.08187478813181323 0.9438714419765777 ['IL4I1|p.W364R|1|0.44|ENSG00000104951|chr19:49890284-49890284|A/G|missense_variant'] 99148 12765 SLANNVTSV True PC9_epitope_Rep1 903.46616043075 903.46506993586 53.975 2 -0.3215042394232349 0.0819239277813459 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2'] 28300 13082 FRYMRIYRRYI True H1975_Epitope_Rep1 1635.8820211559898 1635.8809299358602 55.409 2 -0.32150901591611697 0.0819239277813459 0.9438714419765777 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 97224 19080 SFLFHDII True PC9_epitope_Rep1 990.51746772762 990.51636993586 78.181 2 -0.32151838723581394 0.0819239277813459 0.9438714419765777 ['ENST00000238831.8_1_2:32517356-32517413:+|nuORF'] 100337 14577 SLMKSYVS True PC9_epitope_Rep1 913.45790424617 913.45680993586 60.894 2 -0.32161843126582335 0.08197452456559746 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF'] 33839 9859 GLVKSNSVP True PC9_epitope_Rep1 899.5076313199099 899.50652993586 42.782 2 -0.3216439152256276 0.08197452456559746 0.9438714419765777 ['ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 9243 6564 AVQNLQQHNLI True H1975_Epitope_Rep1 1276.6887835693599 1276.6876899358601 30.306 2 -0.32172670925649816 0.08200727843584986 0.9438714419765777 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 67988 15134 LTLSPLEQEL True PC9_epitope_Rep5 1141.62305499497 1141.6219499358601 63.218 2 -0.32173561131719997 0.08200727843584986 0.9438714419765777 ['nc|ENSG00000069018|Q9HCX4-2|TRPC7', 'nc|ENSG00000069018|Q9HCX4-3|TRPC7', 'ENSG00000069018|ENST00000513104|TRPC7'] 58315 15051 LETQLADW True PC9_epitope_Rep6 974.4709114580199 974.46980993586 69.936 2 -0.3218140488176192 0.08204002996896072 0.9438714419765777 ['ENSG00000129473|ENST00000250405|BCL2L2', 'nc|ENSG00000258643|Q92843-2|BCL2L2', 'ENSG00000258643|ENST00000678502|BCL2L2-PABPN1'] 96794 13420 SERRCRAP True H1975_Epitope_Rep2 973.4875816650098 973.48648993586 56.755 2 -0.3218320322251242 0.08204002996896072 0.9438714419765777 ['ENSG00000198542|ENST00000376180|ITGBL1'] 41450 13260 IAVSQEAL True PC9_epitope_Rep3 829.4545331178899 829.45342993586 56.037 2 -0.3218817896222606 0.08205347746205027 0.9438714419765777 ['COL4A1|p.G1073Vfs*124|1|0.14|ENSG00000187498|chr13:110174730-110174730|C/-|frameshift_variant'] 60092 18196 LHSVVKLDL True PC9_epitope_Rep3 1022.61243074162 1022.61132993586 75.201 2 -0.32189517808532264 0.08205347746205027 0.9438714419765777 ['LGR6|p.L424V|1|0.44|ENSG00000133067|chr1:202307391-202307391|C/G|missense_variant'] 62143 22247 LLPEHFLFL True PC9_epitope_Rep2 1127.63791721347 1127.63682993586 91.05 2 -0.3219097496709706 0.08205347746205027 0.9438714419765777 ['ENSG00000166888|ENST00000300134|STAT6', 'nc|ENSG00000166888|P42226-2|STAT6', 'nc|ENSG00000166888|P42226-3|STAT6', 'ENST00000555222.5_1_12:57492966-57496222:-|nuORF'] 3626 8308 AGPSLPPPAA True PC9_epitope_Rep2 876.4705175351999 876.46942993586 37.322 2 -0.32193303934451467 0.08206985123613142 0.9438714419765777 ['ENST00000455843.5_1_22:19705679-19706159:+|nuORF'] 91235 18390 RLRRQERERKF True NCI_RA007_Epitope_Rep3 1572.9073243870396 1572.90568490379 80.524 3 -0.3219570434906102 0.08208622442609208 0.9438714419765777 ['ENSG00000159450|ENST00000614923|TCHH'] 74931 8205 NLSVQQPP True NCI_RA007_Epitope_Rep1 881.46068112749 881.45958993586 35.914 2 -0.32203471444765397 0.08211457515873583 0.9438714419765777 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 36214 18373 GVGAGVFIL True NCI_RA007_Epitope_Rep3 831.48543932335 831.48489496793 80.456 1 -0.32203479392323936 0.08211457515873583 0.9438714419765777 ['ENST00000527257.1_1_11:124972023-124972236:-|nuORF', 'ENSG00000150433|ENST00000682305|TMEM218'] 100698 11430 SLRDQLLVE True PC9_epitope_Rep3 1071.59242357303 1071.5913299358601 48.964 2 -0.3220442092642288 0.08211457515873583 0.9438714419765777 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 62993 24235 LNERQIKIWF True PC9_epitope_Rep2 1345.7506555499297 1345.7490149037899 98.76 3 -0.32207138506069793 0.08211457515873583 0.9438714419765777 ['ENSG00000172789|ENST00000312492|HOXC5'] 36323 18618 GVGVAGVAAAP True PC9_epitope_Rep1 867.4814165720699 867.48030993586 76.402 2 -0.3220908520028675 0.08211457515873583 0.9438714419765777 ['ABL2|p.P984Hfs*6|1|0.15|ENSG00000143322|chr1:179108316-179108316|G/-|frameshift_variant', 'nc|ENSG00000143322|P42684-4|ABL2', 'nc|ENSG00000143322|P42684-7|ABL2', 'nc|ENSG00000143322|P42684-10|ABL2', 'nc|ENSG00000143322|P42684-5|ABL2', 'nc|ENSG00000143322|P42684-2|ABL2', 'nc|ENSG00000143322|P42684-6|ABL2', 'nc|ENSG00000143322|P42684-3|ABL2', 'ENSG00000143322|ENST00000502732|ABL2'] 56528 5497 LDVDNDRTTP True NCI_RA007_Epitope_Rep1 1144.53603089572 1144.5349299358602 25.453 2 -0.3221502794468034 0.08213094579892632 0.9438714419765777 ['DLC1|p.V1401*|3|0.13|ENSG00000164741|chr8:13088579-13088579|T/-|frameshift_variant', 'ENSG00000164741|ENST00000276297|DLC1', 'nc|ENSG00000164741|Q96QB1-4|DLC1', 'nc|ENSG00000164741|Q96QB1-1|DLC1', 'nc|ENSG00000164741|Q96QB1-6|DLC1'] 90624 19902 RKKKLKKKKTL True PC9_epitope_Rep4 1397.9922232279696 1397.99056490379 84.688 3 -0.32217609770683775 0.08214731585518102 0.9438714419765777 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 97225 18985 SFLFHDII True PC9_epitope_Rep5 990.51746772762 990.51636993586 78.051 2 -0.32218065666749457 0.08215928951028997 0.9438714419765777 ['ENST00000238831.8_1_2:32517356-32517413:+|nuORF'] 47138 9927 IWFQNQRAKWR True PC9_epitope_Rep5 1531.8160497711497 1531.81441490379 43.156 3 -0.3221815724611905 0.08215928951028997 0.9438714419765777 ['ENSG00000175329|ENST00000404699|ISX'] 7570 8373 ASGFEDLLK True NCI_RA007_Epitope_Rep2 978.5022115862998 978.50110993586 37.209 2 -0.3221898347424132 0.08215928951028997 0.9438714419765777 ['nc|ENSG00000179873|P59045-3|NLRP11', 'nc|ENSG00000179873|P59045-2|NLRP11', 'ENSG00000179873|ENST00000589093|NLRP11'] 6435 8597 APSLEQRK True PC9_epitope_Rep3 927.5137793295099 927.51268993586 38.018 2 -0.3221914462459787 0.08215928951028997 0.9438714419765777 ['ENST00000325748.8_1_2:179315776-179315911:-|nuORF'] 126281 8939 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48506993586 44.364 2 -0.3222418484326448 0.08217565760142666 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 137513 8839 YLQDVVERSLG True NCI_RA007_Epitope_Rep2 1277.6615657620098 1277.6604699358602 39.03 2 -0.32227432667994177 0.08219202510878094 0.9438714419765777 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF'] 102420 20749 SPVWIMCLHVP True PC9_epitope_Rep1 1280.64097107192 1280.6398699358601 84.638 2 -0.3223492365920537 0.08224405727838507 0.9438714419765777 ['ENST00000375663.7_1_6:31748338-31748531:-|nuORF'] 87981 10631 QVREICSL True PC9_epitope_Rep4 946.4906013567798 946.48950993586 48.642 2 -0.32242061913824194 0.08226042298227469 0.9438714419765777 ['USP9X|p.I573V|2|0.57|ENSG00000124486|chrX:41151011-41151011|A/G|missense_variant'] 83402 7355 QAVDYDWDP True PC9_epitope_Rep3 1107.45090428943 1107.44980993586 33.3 2 -0.32243826964887534 0.08226798609253812 0.9438714419765777 ['ENSG00000081479|ENST00000649046|LRP2'] 99556 10683 SLFDRQGFLK True NCI_RA007_Epitope_Rep3 1209.6506071554902 1209.64897490379 49.066 3 -0.3224555907056676 0.08226798609253812 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C', 'ENST00000380437.8_1_9:19290781-19335045:+|nuORF'] 94330 14343 RWWFRRLFLIF True PC9_epitope_Rep5 1638.9299573245796 1638.9288699358601 60.171 2 -0.32254191561911794 0.08226798609253812 0.9438714419765777 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 9622 23177 AYFPYFITY True PC9_epitope_Rep2 1183.55899818643 1183.5579099358602 94.635 2 -0.3225740988759701 0.08226798609253812 0.9438714419765777 ['ENSG00000105677|ENST00000222284|TMEM147', 'ENST00000593027.6_1_19:36036533-36038346:+|nuORF', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000392204.6_1_19:36036533-36036719:+|nuORF', 'ENST00000595180.5_1_19:36036641-36037580:+|nuORF', 'ENST00000596232.1_1_19:36036641-36037015:+|nuORF'] 58488 6684 LEYQGKYILK True NCI_RA007_Epitope_Rep5 1253.7019740220096 1253.70031490379 32.38 3 -0.32263508480750014 0.08226798609253812 0.9438714419765777 ['ENSG00000121879|ENST00000263967|PIK3CA'] 86099 13885 QPQLPYSQA True PC9_epitope_Rep5 1030.5083595959 1030.50777496793 58.429 1 -0.3226519259995085 0.08226798609253812 0.9438714419765777 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1'] 80186 19791 PLACLLAQ True PC9_epitope_Rep3 827.4575103233499 827.45640993586 81.356 2 -0.3227298162261712 0.08226798609253812 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000013050'] 27340 10722 FMELGHTP True H1975_Epitope_Rep1 930.42693847106 930.42584993586 46.204 2 -0.32289766928960106 0.08233637028188351 0.9438714419765777 ['ENST00000369485.8_1_6:89321642-89321729:-|nuORF'] 68501 14403 LTVLKVDK True PC9_epitope_Rep4 914.58006798418 914.57896993586 63.311 2 -0.3229016187650148 0.08233637028188351 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant'] 84487 20739 QGPLLLPGL True PC9_epitope_Rep4 906.5538532363399 906.55274993586 87.938 2 -0.32302015925697675 0.0824062187990301 0.9438714419765777 ['nc|ENSG00000131355|Q9BY15-2|ADGRE3', 'ADGRE3|p.Q577Rfs*41|1|0.24|ENSG00000131355|chr19:14630122-14630122|G/-|frameshift_variant', 'ENSG00000131355|ENST00000253673|ADGRE3', 'nc|ENSG00000131355|Q9BY15-3|ADGRE3'] 19829 9595 ELVAEEDQDP True H1975_Epitope_Rep3 1143.4931630242297 1143.4920699358602 41.92 2 -0.323039906495325 0.08242257840218224 0.9438714419765777 ['ENSG00000239697|ENST00000293825|TNFSF12', 'nc|ENSG00000239697|O43508-2|TNFSF12'] 42949 12976 IGAEVYHNL True PC9_epitope_Rep5 1014.5134449763401 1014.51234993586 54.921 2 -0.3231309262502572 0.08249095220267066 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1'] 31216 19534 GDLENAFLNL True NCI_RA007_Epitope_Rep1 1104.54513902744 1104.54457496793 80.148 1 -0.3232103245913289 0.08249095220267066 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000560014.5_1_15:60639831-60644581:-|nuORF'] 10463 9904 CMSLHGGIDQY True H1975_Epitope_Rep1 1222.51107910118 1222.5099899358602 43.031 2 -0.3232894329519904 0.08250583851817517 0.9438714419765777 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000503946.1_1_5:134125872-134147057:+|nuORF'] 135752 7717 YELLYCFRKD True NCI_RA007_Epitope_Rep2 1348.6485585501598 1348.64746993586 34.644 2 -0.32331619645284687 0.08250583851817517 0.9438714419765777 ['GH2|p.G187E|1|0.38|ENSG00000136487|chr17:63880415-63880415|C/T|missense_variant'] 56505 8695 LDTQHMGI True PC9_epitope_Rep1 913.43275212749 913.43164993586 38.285 2 -0.3233713452218207 0.0825221948871537 0.9438714419765777 ['nc|ENSG00000123178|Q5W111-2|SPRYD7'] 58643 9204 LFGIKQIVI True NCI_RA007_Epitope_Rep3 1029.6586526580497 1029.65754993586 43.298 2 -0.32351135474220444 0.08255343422999448 0.9438714419765777 ['ENSG00000145723|ENST00000399004|GIN1', 'GIN1|p.E304*|2|0.13|ENSG00000145723|chr5:103097412-103097413|-/A|frameshift_variant'] 93032 18096 RRRHAFRRQA True NCI_RA007_Epitope_Rep4 1352.77625064784 1352.77514993586 78.302 2 -0.3235154512796619 0.08255343422999448 0.9438714419765777 ['nc|ENSG00000022567|Q5BKX6-2|SLC45A4', 'nc|ENSG00000022567|Q5BKX6|SLC45A4', 'nc|ENSG00000022567|Q5BKX6-3|SLC45A4', 'ENSG00000022567|ENST00000517878|SLC45A4'] 74618 15185 NLDYTELGL True H1975_Epitope_Rep2 1036.5076908895599 1036.5065899358601 63.566 2 -0.3235229660733016 0.08255343422999448 0.9438714419765777 ['ENSG00000133872|ENST00000256255|SARAF'] 132692 14701 VYSDYLQTI True NCI_RA007_Epitope_Rep5 1100.53899101784 1100.5378899358602 63.217 2 -0.32358612814060217 0.0825668449197861 0.9438714419765777 ['ENSG00000179715|ENST00000546455|PCED1B'] 129101 6558 VTAVSLPR True NCI_RA007_Epitope_Rep3 841.5021520166499 841.50104993586 32.848 2 -0.3236135676792616 0.0825668449197861 0.9438714419765777 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 56518 11577 LDTVCRTSQ True H1975_Epitope_Rep3 1021.4862442523299 1021.48514993586 49.66 2 -0.3236168807111031 0.0825668449197861 0.9438714419765777 ['ENST00000490021.2_1_1:110230443-110251195:+|nuORF'] 111160 6826 TLETVLEK True NCI_RA007_Epitope_Rep2 931.5226126777098 931.52150993586 31.166 2 -0.32373111279450295 0.08261884814887435 0.9438714419765777 ['ENSG00000105929|ENST00000310018|ATP6V0A4'] 10033 15974 AYTTVLQEW True NCI_RA007_Epitope_Rep5 1109.5393253710097 1109.53822993586 68.169 2 -0.3238119492209979 0.0826693759691995 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2'] 78415 7435 PAYFRRHVK True PC9_epitope_Rep3 1172.6566955954402 1172.65504490379 33.604 3 -0.323852559847337 0.0826693759691995 0.9438714419765777 ['ENSG00000196110|ENST00000591998|ZNF699'] 102216 5825 SPSPPQAEA True PC9_epitope_Rep5 882.4083112014599 882.40720993586 27.398 2 -0.32387188350379503 0.08268425274039747 0.9438714419765777 ['ENSG00000160410|ENST00000291842|SHKBP1'] 115874 15221 TVNWYQQLP True PC9_epitope_Rep3 1147.56620882519 1147.5651099358602 63.694 2 -0.3238818616534394 0.08268425274039747 0.9438714419765777 ['nc|ENSG00000211651|P01699|IGLV1-44'] 16739 13047 EEYEYMNRRRR True PC9_epitope_Rep3 1600.75285746124 1600.75120490379 55.213 3 -0.3239081982064842 0.08270060243111253 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 48260 6620 KDHWFWRVRNN True H1975_Epitope_Rep1 1556.7749132351596 1556.77269987172 30.519 4 -0.3239382124582392 0.08271400310110677 0.9438714419765777 ['MMP16|p.Q363H|1|0.35|ENSG00000156103|chr8:88074738-88074738|C/G|missense_variant'] 2963 17937 AFIEKHWTF True PC9_epitope_Rep5 1177.59202965021 1177.5903749037902 74.013 3 -0.3239402765942823 0.08271400310110677 0.9438714419765777 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 100193 20099 SLLGTVWQV True PC9_epitope_Rep2 1001.55458151233 1001.55348993586 82.719 2 -0.32395488880876827 0.08271400310110677 0.9438714419765777 ['ENST00000305105.2_1_7:100867275-100867446:+|nuORF'] 1273 4726 AEDREQLVA True H1975_Epitope_Rep1 1029.50908787189 1029.50798993586 23.232 2 -0.32413208172410807 0.08276599536624488 0.9438714419765777 ['ENSG00000100867|ENST00000250383|DHRS2', 'ENST00000556729.1_1_14:24108037-24109131:+|nuORF', 'ENST00000553896.5_1_14:24099332-24110898:+|nuORF', 'nc|ENSG00000100867|Q13268-2|DHRS2'] 46526 5745 ITQIEHEVSSS True NCI_RA007_Epitope_Rep4 1228.5935457718401 1228.59244993586 28.716 2 -0.32416380808753315 0.08277939158483774 0.9438714419765777 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 37041 17595 GVSDVDYSL True PC9_epitope_Rep2 953.43419159613 953.43308993586 72.958 2 -0.3241650907887412 0.08277939158483774 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 112892 5338 TPPPVQCHHR True NCI_RA007_Epitope_Rep3 1170.57164564214 1170.57054993586 28.004 2 -0.3241796519762974 0.08277939158483774 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 63895 20900 LPVPTALTV True PC9_epitope_Rep3 909.55351888317 909.55242993586 85.667 2 -0.32420953804746355 0.08279573724917133 0.9438714419765777 ['nc|ENSG00000125319|Q8N3J3-3|HROB', 'ENSG00000125319|ENST00000585683|HROB', 'nc|ENSG00000125319|Q8N3J3|HROB'] 102202 10279 SPSPAFQF True H1975_Epitope_Rep2 879.41266830591 879.41156993586 44.544 2 -0.32430375959602625 0.08282990287801835 0.9438714419765777 ['ENST00000533277.5_1_11:66612933-66613146:+|nuORF'] 18588 14363 ELADYNNVIY True H1975_Epitope_Rep3 1212.56626839484 1212.56516993586 60.598 2 -0.32435957395517 0.08284624705966213 0.9438714419765777 ['ENSG00000175065|ENST00000308128|DSG4', 'nc|ENSG00000175065|Q86SJ6-2|DSG4'] 81868 10748 PSKTIPGL True PC9_epitope_Rep2 811.4803539429099 811.47924993586 46.661 2 -0.3244010085653853 0.08286259065880215 0.9438714419765777 ['ENST00000399878.7_2_4:25750095-25759376:-|nuORF'] 62716 22952 LLYDNWVL True PC9_epitope_Rep5 1034.54368247546 1034.5425899358602 93.273 2 -0.324447311697906 0.08287893367546954 0.9438714419765777 ['ENSG00000009724|ENST00000400897|MASP2'] 21008 4574 ERAPPQTHL True PC9_epitope_Rep5 1047.5461420869499 1047.54504993586 22.657 2 -0.324565642927459 0.08289084494494138 0.9438714419765777 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 38340 7300 HGAKEDFHPPA True PC9_epitope_Rep5 1204.56252042708 1204.56088490379 33.041 3 -0.3245732657084127 0.08289084494494138 0.9438714419765777 ['nc|ENSG00000135828|Q05823-2|RNASEL', 'ENSG00000135828|ENST00000367559|RNASEL'] 108308 5600 TEDFHTPSP True H1975_Epitope_Rep3 1029.4403396057298 1029.43924993586 26.58 2 -0.3246062230454635 0.08289084494494138 0.9438714419765777 ['CEP350|p.Q2203H|1|0.4|ENSG00000135837|chr1:180092714-180092714|G/T|missense_variant'] 116980 20996 TYPNTYIF True PC9_epitope_Rep5 1017.48074786573 1017.47964993586 85.823 2 -0.3246091279899235 0.08289084494494138 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 62494 17578 LLSQLGQPSI True PC9_epitope_Rep5 1054.60225998074 1054.60116993586 72.622 2 -0.3248030757109427 0.08299627603656255 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 118687 9702 VEASTQFKKKQ True H1975_Epitope_Rep3 1292.7088503076 1292.7077499358602 42.341 2 -0.3248809838149662 0.08302747389801518 0.9438714419765777 ['nc|ENSG00000074803|Q13621-3|SLC12A1', 'ENSG00000074803|ENST00000380993|SLC12A1'] 135375 5386 YDHRLHTPMYF True H1975_Epitope_Rep2 1478.6765046335001 1478.67484490379 25.753 3 -0.32489236276246886 0.08302747389801518 0.9438714419765777 ['ENSG00000276240|ENST00000641792|OR4E1'] 106224 4237 SVPPAAEPVP True H1975_Epitope_Rep2 962.5072969667399 962.50618993586 21.41 2 -0.3249536933690684 0.08302747389801518 0.9438714419765777 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 131741 18336 VWYERYKFDIP True PC9_epitope_Rep5 1514.7558005000196 1514.75416490379 75.544 3 -0.32502523218149837 0.08304381135638819 0.9438714419765777 ['ENSG00000164241|ENST00000296662|C5orf63'] 31386 4938 GEASPPAPP True NCI_RA007_Epitope_Rep3 821.3919328613299 821.39082993586 26.417 2 -0.3252279898494501 0.08306014823261118 0.9438714419765777 ['ENSG00000185344|ENST00000330342|ATP6V0A2'] 133730 18013 WLKRRIWRMP True NCI_RA007_Epitope_Rep5 1440.82886338432 1440.82776993586 76.085 2 -0.3252720002636527 0.08307648452671525 0.9438714419765777 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 135015 11118 YAGSGNVL True PC9_epitope_Rep5 779.38136817763 779.3808149679301 47.755 1 -0.3253079461918382 0.08311063602351683 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 72726 8565 MYRRWWEQFVQ True PC9_epitope_Rep4 1627.77180200067 1627.7701649037901 40.425 3 -0.32534998199973064 0.08314478630346867 0.9438714419765777 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 79940 19341 PIRFSAIDKL True PC9_epitope_Rep3 1158.6760936273397 1158.6744449037901 79.616 3 -0.3254062798263174 0.08315667587066893 0.9438714419765777 ['ENSG00000107036|ENST00000414202|RIC1', 'nc|ENSG00000107036|Q4ADV7-2|RIC1'] 115351 19345 TVEFEECVK True PC9_epitope_Rep1 1082.4954119536999 1082.4943099358602 79.215 2 -0.3254331932961682 0.08315667587066893 0.9438714419765777 ['ENSG00000131584|ENST00000354700|ACAP3', 'ACAP3-DVL1|1|fusion', 'ENST00000479108.5_1_1:1237366-1243195:-|nuORF', 'ACAP3-DVL1|2|fusion'] 117265 13193 VAAAALGEAA True PC9_epitope_Rep1 842.4497820906199 842.44923496793 55.61 1 -0.32545764279607947 0.08315667587066893 0.9438714419765777 ['ENST00000334371.3_1_1:152749031-152749076:+|nuORF'] 66445 7292 LSRPTEGVQA True H1975_Epitope_Rep3 1056.55637241748 1056.55526993586 33.023 2 -0.32546346174732244 0.08315667587066893 0.9438714419765777 ['nc|ENSG00000135241|Q9NP80-3|PNPLA8', 'nc|ENSG00000135241|Q9NP80-2|PNPLA8', 'ENSG00000135241|ENST00000257694|PNPLA8'] 33335 17024 GLDSLKPAV True PC9_epitope_Rep3 898.5123823471799 898.51128993586 70.639 2 -0.3255257643483352 0.08317300840815163 0.9438714419765777 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|451|3|anti-sense'] 12445 16482 DKLNNLVLFDK True PC9_epitope_Rep4 1317.7292513990099 1317.72760490379 71.369 3 -0.3255453285509586 0.0831982615820316 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 58899 8545 LFTVRKWEWGP True NCI_RA007_Epitope_Rep5 1417.7506555499297 1417.7490149037899 39.551 3 -0.325576564955975 0.0831982615820316 0.9438714419765777 ['ENST00000534358.5_2_11:118393008-118393158:+|nuORF'] 31792 14456 GELTMTFPA True H1975_Epitope_Rep3 965.4528188657299 965.4522749679301 60.963 1 -0.3256303519777334 0.0831982615820316 0.9438714419765777 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 135018 9442 YAGSGNVL True PC9_epitope_Rep6 779.38136817763 779.38026993586 46.55 2 -0.32566541829041173 0.0831982615820316 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 71355 9906 MHWKMRSHFNR True PC9_epitope_Rep1 1528.7292259960398 1528.7275649037902 42.961 3 -0.32567827723590903 0.0831982615820316 0.9438714419765777 ['nc|ENSG00000292332|P26951-2|IL3RA', 'ENSG00000185291|ENST00000331035|IL3RA'] 44298 11380 ILYCVCKKWEI True H1975_Epitope_Rep1 1396.7247006958798 1396.7236099358602 48.752 2 -0.32568788437145624 0.0831982615820316 0.9438714419765777 ['nc|ENSG00000161929|Q6UWF3-2|SCIMP', 'nc|ENSG00000161929|Q6UWF3-3|SCIMP'] 118052 11719 VATKIFQEL True NCI_RA007_Epitope_Rep5 1047.59644632431 1047.5953499358602 51.731 2 -0.3257190987807406 0.0831982615820316 0.9438714419765777 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1'] 147 9302 AADKGVYII True NCI_RA007_Epitope_Rep3 948.5280324113198 948.52692993586 43.693 2 -0.32573734585007547 0.08321014479847542 0.9438714419765777 ['ENSG00000143653|ENST00000366510|SCCPDH'] 118735 5157 VEDFDWCTPP True H1975_Epitope_Rep2 1207.4855755459898 1207.48446993586 24.913 2 -0.3257495745086329 0.08321014479847542 0.9438714419765777 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1'] 25213 5464 FEAEVARA True H1975_Epitope_Rep2 891.4450310633498 891.44392993586 26.044 2 -0.32586161961844956 0.08321014479847542 0.9438714419765777 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1'] 100755 23387 SLRNFRMIGSF True PC9_epitope_Rep4 1326.6866753943798 1326.68556993586 98.217 2 -0.3259333998961951 0.08321014479847542 0.9438714419765777 ['ENST00000366844.7_2_1:225684839-225684929:-|nuORF'] 23820 18046 EYLKLLHSF True PC9_epitope_Rep4 1148.6229954253201 1148.6213549037902 77.48 3 -0.3259801350595689 0.08322350845948352 0.9438714419765777 ['ENSG00000198911|ENST00000361204|SREBF2', 'ENST00000491541.1_1_22:42287274-42295397:+|nuORF', 'ENST00000424354.5_1_22:42276758-42295397:+|nuORF'] 84418 10188 QGFTNSTV True PC9_epitope_Rep5 852.39774651776 852.3971949679301 44.175 1 -0.32605245784469966 0.08322350845948352 0.9438714419765777 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'TRERF1|p.E818Afs*14|1|0.26|ENSG00000124496|chr6:42256986-42256987|-/TG|frameshift_variant'] 133729 18182 WLKRRIWRMP True NCI_RA007_Epitope_Rep4 1440.82886338432 1440.82776993586 78.686 2 -0.32609803043673924 0.08322350845948352 0.9438714419765777 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 124521 21301 VLFVGLREL True PC9_epitope_Rep2 1044.6331661861998 1044.63206993586 87.398 2 -0.3263190404613467 0.08327545368737868 0.9438714419765777 ['SEMA5A|p.H478_I482delinsL|1|0.16|ENSG00000112902|chr5:9154525-9154536|TCTTGACCACGT/-|inframe_deletion'] 117441 5596 VADSGLTLK True NCI_RA007_Epitope_Rep5 902.50729696674 902.50618993586 28.214 2 -0.32638770954962876 0.0833081046426727 0.9438714419765777 ['nc|ENSG00000126858|Q8IXI2-4|RHOT1', 'nc|ENSG00000126858|Q8IXI2|RHOT1', 'nc|ENSG00000126858|Q8IXI2-5|RHOT1', 'nc|ENSG00000126858|Q8IXI2-2|RHOT1', 'ENSG00000126858|ENST00000545287|RHOT1', 'nc|ENSG00000126858|Q8IXI2-3|RHOT1'] 61424 13494 LLERNAEAI True PC9_epitope_Rep1 1027.5662088251897 1027.5651099358602 56.761 2 -0.326449238804692 0.0833081046426727 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant', 'MDN1|p.G347Sfs*36|2|0.35|ENSG00000112159|chr6:89790201-89790219|AGGAGGCTTTGTTCTACCT/-|frameshift_variant'] 54940 16747 LAGYFPCMNSL True PC9_epitope_Rep2 1214.5464019807398 1214.54476490379 69.663 3 -0.326523319633683 0.08332146164256714 0.9438714419765777 ['nc|ENSG00000176406|Q9UQ26-7|RIMS2'] 65673 5062 LSHDERQSR True NCI_RA007_Epitope_Rep3 1126.5479329921 1126.5462749037902 26.905 3 -0.32657376746815564 0.08332146164256714 0.9438714419765777 ['ENST00000452649.1_1_22:30793095-30805128:+|nuORF'] 79010 22391 PFLTFDDLL True PC9_epitope_Rep2 1079.55391280599 1079.55337496793 91.621 1 -0.3265812001691404 0.08332146164256714 0.9438714419765777 ['ENSG00000134440|ENST00000256854|NARS1'] 98666 10101 SIQDALPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43778993586 46.824 2 -0.32664088173549544 0.08337339957618818 0.9438714419765777 ['ENST00000569758.1_1_15:75646945-75647372:+|nuORF'] 102460 10381 SPYHYRLDW True H1975_Epitope_Rep1 1235.5723568347898 1235.5712499358601 44.879 2 -0.3266613200478617 0.08342236467236468 0.9438714419765777 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 126369 11381 VPLC[Carbamidomethyl]ILYEK True H1975_Epitope_Rep1 1133.61546779616 1133.6143699358602 48.755 2 -0.3266731207288111 0.08342236467236468 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 71929 8969 MPSRPEASL True PC9_epitope_Rep2 986.4855159763399 986.48440993586 39.855 2 -0.32667882244149726 0.08342236467236468 0.9438714419765777 ['ENST00000549913.6_1_12:113306162-113306792:+|nuORF'] 44433 5549 INISEGNC[Carbamidomethyl]PER True NCI_RA007_Epitope_Rep5 1287.58774947818 1287.5866499358601 28.03 2 -0.3267062502859287 0.08346538002741824 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000498121.1_1_21:47289198-47321357:+|nuORF', 'ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 38159 3468 HERKHRGEK True NCI_RA007_Epitope_Rep2 1175.6271863723098 1175.62555490379 18.147 3 -0.3267165007234653 0.08346538002741824 0.9438714419765777 ['ENSG00000196757|ENST00000254321|ZNF700'] 86184 7428 QPSTTGIR True NCI_RA007_Epitope_Rep5 858.4559301002199 858.4553849679301 35.25 1 -0.3267177646901423 0.08346538002741824 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 126408 18707 VPLLGGLL True H1975_Epitope_Rep2 780.5109257952 780.51037496793 77.656 1 -0.326723232768469 0.08346538002741824 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant'] 99135 7657 SLAIRSPTL True PC9_epitope_Rep2 956.5654805492001 956.56438993586 34.823 2 -0.32676491304809374 0.08346538002741824 0.9438714419765777 ['ENSG00000283247|ENST00000636578|CCDC201'] 26062 9591 FHDPDSAVV True PC9_epitope_Rep2 985.4505103666099 985.44940993586 42.236 2 -0.3267784563454738 0.08346538002741824 0.9438714419765777 ['SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF'] 131608 13679 VVYGGGAAEI True PC9_epitope_Rep4 934.4759968384599 934.47544496793 60.507 1 -0.32678120433569896 0.08346538002741824 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 80696 12575 PLPVPPPTG True PC9_epitope_Rep5 873.49600400705 873.49490993586 53.369 2 -0.32691844552980887 0.08349801491926151 0.9438714419765777 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 117975 13538 VASASLVGL True PC9_epitope_Rep2 815.47526856247 815.47416993586 57.366 2 -0.32693153061900715 0.08349801491926151 0.9438714419765777 ['ENST00000599637.5_1_19:53594847-53594907:-|nuORF'] 76211 12799 NRWWRWRRARW True NCI_RA007_Epitope_Rep2 1727.9134128269898 1727.91230993586 54.403 2 -0.3269524260745261 0.08351135797194331 0.9438714419765777 ['nc|ENSG00000171160|Q8NDC4-2|MORN4'] 113282 6940 TQGSYMCEC True H1975_Epitope_Rep2 1020.33508888516 1020.33398993586 31.615 2 -0.3269634937319391 0.08351135797194331 0.9438714419765777 ['ENSG00000134250|ENST00000256646|NOTCH2'] 95366 11892 SAHLVFVKV True PC9_epitope_Rep4 998.5913013742199 998.59020993586 53.517 2 -0.32697475467698295 0.08351135797194331 0.9438714419765777 ['ENSG00000179820|ENST00000391770|MYADM', 'ENST00000474610.1_1_2:33952107-33952842:-|nuORF'] 85953 8758 QPEKPSLP True H1975_Epitope_Rep2 894.4810822188999 894.47998993586 38.651 2 -0.32699070930698393 0.08354250111259456 0.9438714419765777 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32'] 127182 6507 VQFLDDTDP True H1975_Epitope_Rep3 1048.47130538084 1048.47020993586 29.999 2 -0.3270135106244026 0.08354250111259456 0.9438714419765777 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'ENSG00000134775|ENST00000590592|FHOD3', 'FHOD3|p.M1132Rfs*19|1|0.5|ENSG00000134775|chr18:36744120-36744139|CCATGGTGGTAGAAAACTTC/-|frameshift_variant', 'ENST00000589114.5_1_18:33877702-34289359:+|nuORF'] 90138 13013 RGVQPLVI True PC9_epitope_Rep4 880.5494365622399 880.54832993586 57.949 2 -0.32702818408546924 0.08354250111259456 0.9438714419765777 ['nc|nan|Q6UWU4-3|C6orf89', 'ENSG00000198663|ENST00000480824|C6orf89', 'nc|nan|Q6UWU4-2|C6orf89'] 128997 6397 VSYGKSSGVP True PC9_epitope_Rep1 979.49746055903 979.49636993586 29.415 2 -0.32716497183750143 0.0836122187410994 0.9438714419765777 ['ENST00000552252.1_1_14:25042845-25044048:-|nuORF', 'ENSG00000100448|ENST00000216336|CTSG'] 49394 10131 KIKVSPFVL True NCI_RA007_Epitope_Rep4 1029.6586526580497 1029.65754993586 45.825 2 -0.32726865083738876 0.08362853124944372 0.9438714419765777 ['ENST00000468410.5_1_7:106841924-106842017:+|nuORF'] 78799 21160 PELSITLTL True PC9_epitope_Rep1 985.5695628701301 985.56846993586 86.226 2 -0.3273174386767331 0.08364335427828903 0.9438714419765777 ['nc|ENSG00000090097|P57723-2|PCBP4', 'ENSG00000090097|ENST00000461554|PCBP4', 'ENST00000492809.5_1_3:51994845-51995337:-|nuORF', 'ENST00000498822.5_1_3:51994845-51996905:-|nuORF'] 137390 12157 YLLEKSRLVS True H1975_Epitope_Rep1 1206.69722299474 1206.6961299358602 51.78 2 -0.32732712306931827 0.08364335427828903 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B', 'nc|ENSG00000041515|Q9Y6X6-4|MYO16', 'MYO16|p.T705Qfs*8|1|0.13|ENSG00000041515|chr13:108962446-108962446|A/-|frameshift_variant', 'MYO16|p.L752Ffs*14|1|0.13|ENSG00000041515|chr13:108964849-108964850|-/T|frameshift_variant', 'ENST00000375857.6_1_13:109445985-109707944:+|nuORF', 'nc|ENSG00000041515|Q9Y6X6-3|MYO16', 'nc|ENSG00000041515|Q9Y6X6-2|MYO16', 'MYO16|p.V1625Wfs*16|1|0.49|ENSG00000041515|chr13:109141146-109141146|C/-|frameshift_variant', 'MYO16|p.A1658Rfs*45|1|0.14|ENSG00000041515|chr13:109141243-109141244|-/C|frameshift_variant', 'nc|ENSG00000041515|Q9Y6X6|MYO16', 'ENSG00000041515|ENST00000457511|MYO16'] 75258 9379 NPNEEVAEV True H1975_Epitope_Rep1 999.4509042894299 999.44980993586 40.985 2 -0.3274121133995961 0.08365966536133855 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM', 'ASPM|p.A85Rfs*34|1|0.34|ENSG00000066279|chr1:197146185-197146185|C/-|frameshift_variant'] 64524 3706 LRDAWRRR True NCI_RA007_Epitope_Rep4 1127.64244251363 1127.64134993586 20.38 2 -0.3275127252604731 0.08374568367092664 0.9438714419765777 ['ENSG00000165730|ENST00000298596|STOX1', 'nc|ENSG00000165730|Q6ZVD7-3|STOX1', 'nc|ENSG00000165730|Q6ZVD7-2|STOX1'] 56403 11881 LDSEASVHALP True PC9_epitope_Rep2 1137.56660274801 1137.56550993586 51.025 2 -0.3275188431487458 0.08374568367092664 0.9438714419765777 ['ENSG00000148408|ENST00000371372|CACNA1B'] 41975 9636 IEDFKVGN True H1975_Epitope_Rep3 920.46034677432 920.45924993586 42.081 2 -0.32757858907737 0.0837797910399943 0.9438714419765777 ['nc|ENSG00000142731|O00444-2|PLK4', 'ENSG00000142731|ENST00000270861|PLK4', 'PLK4|p.W580Yfs*9|1|0.17|ENSG00000142731|chr4:127890142-127890143|-/AT|frameshift_variant', 'ENST00000511942.5_1_4:128802289-128804471:+|nuORF', 'ENST00000503914.1_1_4:128802289-128804548:+|nuORF'] 42915 10818 IFVTPWAWP True H1975_Epitope_Rep2 1115.5804023373498 1115.57930993586 46.64 2 -0.32760172414190725 0.08379162439710253 0.9438714419765777 ['ENST00000482847.5_1_9:116154440-116155869:-|nuORF'] 31181 16866 GDFQGLVEI True NCI_RA007_Epitope_Rep5 976.4865615221598 976.48601496793 71.628 1 -0.3276206693397141 0.08379162439710253 0.9438714419765777 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.Q2856Rfs*14|1|0.22|ENSG00000007174|chr17:11807876-11807876|C/-|frameshift_variant', 'DNAH9|p.R1341Gfs*27|1|0.35|ENSG00000007174|chr17:11689841-11689841|C/-|frameshift_variant', 'DNAH9|p.A1913Vfs*27|1|0.25|ENSG00000007174|chr17:11727846-11727846|C/-|frameshift_variant'] 57454 4336 LEIQQPLKY True H1975_Epitope_Rep3 1130.6335601090198 1130.63191490379 21.795 3 -0.327646351677864 0.08379162439710253 0.9438714419765777 ['ENST00000461745.5_2_3:77089697-77089820:+|nuORF'] 83180 22592 PYTPFLTEL True PC9_epitope_Rep5 1079.55391280599 1079.55280993586 91.898 2 -0.32765738975820446 0.08379162439710253 0.9438714419765777 ['ENSG00000196305|ENST00000443024|IARS1'] 118031 18578 VATDFFTVL True NCI_RA007_Epitope_Rep3 1011.5276980581499 1011.52717496793 81.284 1 -0.3276999107855332 0.08382423606043887 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 30604 13159 GALAAAATTP True PC9_epitope_Rep1 842.44978209062 842.44868993586 55.48 2 -0.3277175178645588 0.08382423606043887 0.9438714419765777 ['ENSG00000147454|ENST00000519973|SLC25A37', 'nc|ENSG00000147454|Q9NYZ2-4|SLC25A37'] 115248 11429 TVDELRMAFP True PC9_epitope_Rep1 1177.5801446371697 1177.5784949037902 48.84 3 -0.3277570373939463 0.08383904895801819 0.9438714419765777 ['nc|ENSG00000069998|Q9BXW7-2|HDHD5', 'ENSG00000069998|ENST00000336737|HDHD5'] 85407 13153 QLEIFHLVMYR True NCI_RA007_Epitope_Rep1 1447.7645913619099 1447.7634899358602 55.158 2 -0.32778708155144215 0.08383904895801819 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 135328 4753 YCRRWRYWEYW True NCI_RA007_Epitope_Rep1 1765.7936000744096 1765.7925099358602 22.568 2 -0.32788296513045484 0.08387165661203352 0.9438714419765777 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 16599 12663 EERQRHWQRER True NCI_RA007_Epitope_Rep2 1608.7981678608796 1608.79706993586 53.869 2 -0.32788962980573105 0.08387165661203352 0.9438714419765777 ['ENSG00000107816|ENST00000454422|LZTS2'] 3454 13775 AGLHQSSPVAL True PC9_epitope_Rep1 1078.5771078620598 1078.5760099358602 57.832 2 -0.32796049183527376 0.08388497401950316 0.9438714419765777 ['ENST00000369872.3_1_1:110009314-110019415:+|nuORF'] 57757 7923 LENRREPA True H1975_Epitope_Rep1 983.5148419586699 983.51374993586 35.427 2 -0.32796259295024865 0.08388497401950316 0.9438714419765777 ['ENST00000541522.5_2_6:26458277-26458358:+|nuORF'] 90622 20176 RKKKLKKKKTL True NCI_RA007_Epitope_Rep4 1397.9922232279696 1397.99056490379 87.302 3 -0.3279773645249773 0.08388497401950316 0.9438714419765777 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 65985 14613 LSLSSETKPKL True PC9_epitope_Rep4 1201.69180326113 1201.69015490379 64.139 3 -0.32801118042914507 0.08389978291042385 0.9438714419765777 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF'] 13128 10177 DLSLVPERLQR True PC9_epitope_Rep1 1324.7462984454799 1324.7452099358602 44.022 2 -0.3280112350894725 0.08389978291042385 0.9438714419765777 ['ENSG00000124659|ENST00000372876|TBCC'] 81336 5732 PPRPPPPPP True PC9_epitope_Rep5 950.5337864980999 950.53268993586 27.042 2 -0.328161832244171 0.08393387782700759 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 131734 18633 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 78.486 2 -0.32817534235272905 0.08395017793594306 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 129864 18231 VTLNPAENI True PC9_epitope_Rep6 969.51311062317 969.51200993586 82.767 2 -0.3282308102743054 0.08400056937475535 0.9438714419765777 ['TPH2|p.P138A|1|0.22|ENSG00000139287|chr12:71944450-71944450|C/G|missense_variant'] 25866 10305 FGGPLERLDAI True H1975_Epitope_Rep3 1186.63462273818 1186.63352993586 44.691 2 -0.32823246738580014 0.08400056937475535 0.9438714419765777 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 84518 8610 QGVPALEEAPD True H1975_Epitope_Rep3 1124.5349682665599 1124.5338699358601 38.11 2 -0.32829820598343473 0.08401537257134724 0.9438714419765777 ['ELOA2|p.R293G|1|0.27|ENSG00000206181|chr18:47034388-47034388|G/C|missense_variant'] 15140 10588 EAENDKVVY True H1975_Epitope_Rep3 1065.4978544818498 1065.4967499358602 45.796 2 -0.32830549900970596 0.08401537257134724 0.9438714419765777 ['AGMO|p.E255D|1|0.14|ENSG00000187546|chr7:15390728-15390728|T/A|missense_variant'] 106213 17868 SVPNKDVFQEL True PC9_epitope_Rep3 1274.65066672514 1274.6495699358602 73.927 2 -0.3283296127910886 0.08404946179165555 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 67547 8765 LTEQLEQFKRA True NCI_RA007_Epitope_Rep1 1361.73031402817 1361.72866490379 38.095 3 -0.3283716752408256 0.08406426245841266 0.9438714419765777 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 131732 18359 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 77.425 2 -0.32839739624377057 0.08406426245841266 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 11158 8729 DEGIFISK True NCI_RA007_Epitope_Rep2 907.46509780159 907.46400993586 38.599 2 -0.3284209872692033 0.08408055792769713 0.9438714419765777 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 95424 23613 SALALSLLLV True PC9_epitope_Rep2 998.6375828603 998.63648993586 96.296 2 -0.3284763789280456 0.08411464356241884 0.9438714419765777 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000563753.1_1_15:73884305-73925556:-|nuORF', 'ENST00000565325.5_1_15:73854253-73925580:-|nuORF', 'nc|ENSG00000156642|Q9Y639-4|NPTN'] 78472 4721 PDDEWVKNR True NCI_RA007_Epitope_Rep5 1157.5465360097699 1157.54488490379 24.843 3 -0.3285008637022052 0.08412644761887819 0.9438714419765777 ['nc|ENSG00000118564|Q9UKA1-2|FBXL5', 'ENSG00000118564|ENST00000341285|FBXL5'] 101257 16220 SLWLVHVLP True H1975_Epitope_Rep2 1062.6226015025002 1062.62150993586 67.599 2 -0.3285161831052986 0.08412644761887819 0.9438714419765777 ['ENST00000343813.9_1_1:6293667-6294963:-|nuORF'] 138719 8174 YRWQDERQYRR True H1975_Epitope_Rep3 1654.8076699154199 1654.8065699358601 36.421 2 -0.3285313543418242 0.08412644761887819 0.9438714419765777 ['ENSG00000142961|ENST00000319928|MOB3C'] 63644 7531 LPNLSQRI True H1975_Epitope_Rep1 939.5501648382299 939.54906993586 33.966 2 -0.3285505141275383 0.08412644761887819 0.9438714419765777 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 32332 4587 GGASEKGR True H1975_Epitope_Rep1 760.38276515996 760.38166993586 22.672 2 -0.32857872898477686 0.08413525676372756 0.9438714419765777 ['ENST00000556478.2_1_14:51054573-51054639:+|nuORF'] 7622 7387 ASKKAVLGP True H1975_Epitope_Rep2 869.5334521449299 869.53234993586 33.354 2 -0.3285889382814868 0.08413525676372756 0.9438714419765777 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF', 'nc|ENSG00000198814|P32189-1|GK', 'nc|ENSG00000198814|P32189-4|GK', 'nc|ENSG00000198814|P32189-2|GK', 'ENSG00000229894|ENST00000505354|GK3', 'ENSG00000198814|ENST00000427190|GK'] 25491 8249 FEPLSSPDGP True NCI_RA007_Epitope_Rep5 1044.4763907612798 1044.47528993586 38.408 2 -0.3286450920964628 0.08413525676372756 0.9438714419765777 ['ENSG00000120451|ENST00000265909|SNX19', 'nc|ENSG00000120451|Q92543-2|SNX19', 'ENST00000452841.1_1_13:19467552-19468185:-|nuORF'] 86214 9466 QPVSGTQVV True PC9_epitope_Rep5 913.48689587533 913.4863449679301 41.366 1 -0.3286470426764332 0.08413525676372756 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 113048 12086 TPVLEVEEA True H1975_Epitope_Rep1 985.49679185269 985.49568993586 51.502 2 -0.3286535668041517 0.08413525676372756 0.9438714419765777 ['ENST00000474629.6_1_3:122449243-122449357:+|nuORF'] 28031 6613 FRAPNTDAA True PC9_epitope_Rep5 961.4617437566499 961.46064993586 30.409 2 -0.3286667149423483 0.08413525676372756 0.9438714419765777 ['nc|ENSG00000147394|O15231-4|ZNF185', 'nc|ENSG00000147394|O15231-7|ZNF185', 'nc|ENSG00000147394|O15231|ZNF185', 'nc|ENSG00000147394|O15231-3|ZNF185', 'nc|ENSG00000147394|O15231-8|ZNF185', 'nc|ENSG00000147394|O15231-6|ZNF185', 'ENSG00000147394|ENST00000695776|ZNF185', 'nc|ENSG00000147394|O15231-5|ZNF185'] 19059 17206 ELGSALAP True H1975_Epitope_Rep3 756.40176926904 756.40122496793 71.824 1 -0.3288431068943255 0.08420490928495197 0.9438714419765777 ['ENST00000490187.1_1_20:25205760-25206148:+|nuORF'] 10036 13443 AYVDKYKYS True H1975_Epitope_Rep1 1135.55497543515 1135.5538699358601 56.822 2 -0.32889488812841 0.08423748710469212 0.9438714419765777 ['ENSG00000139218|ENST00000369367|SCAF11', 'nc|ENSG00000139218|Q99590-2|SCAF11'] 1853 4923 AEIEHKVIEA True H1975_Epitope_Rep2 1137.60298825673 1137.60133490379 24.02 3 -0.32895567769540196 0.08423748710469212 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11'] 41546 4721 IDDRWWRGVCK True NCI_RA007_Epitope_Rep1 1432.70338808768 1432.70173490379 22.445 3 -0.32902143393968164 0.08425377514540312 0.9438714419765777 ['CTTN|p.G528R|1|0.24|ENSG00000085733|chr11:70435091-70435091|G/C|missense_variant'] 98569 9097 SIMGYYYVP True PC9_epitope_Rep1 1091.4997690581502 1091.49866993586 39.843 2 -0.32907445296617815 0.08428634948866162 0.9438714419765777 ['nc|ENSG00000163406|Q16348-2|SLC15A2', 'ENSG00000163406|ENST00000489711|SLC15A2'] 132825 7902 VYTGRKENITA True NCI_RA007_Epitope_Rep1 1250.66190011518 1250.66080993586 34.73 2 -0.3290767636550114 0.08428634948866162 0.9438714419765777 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 13393 9422 DNIQTVKRLRT True PC9_epitope_Rep2 1342.7680965192199 1342.76698993586 41.582 2 -0.32918076781236144 0.08432920756864419 0.9438714419765777 80508 24487 PLLLLCVAL True PC9_epitope_Rep5 953.5983609006099 953.59726993586 99.268 2 -0.32919051870165644 0.08432920756864419 0.9438714419765777 ['ENSG00000187944|ENST00000342506|C2orf66', 'nc|nan|Q6UXQ4|C2orf66'] 124079 22693 VKRRRRWYFRV True PC9_epitope_Rep1 1620.9589660370798 1620.9578699358601 92.094 2 -0.32920949938688393 0.08432920756864419 0.9438714419765777 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 19707 18233 ELSHYEFHTIP True PC9_epitope_Rep1 1371.64591569787 1371.6448099358602 74.924 2 -0.32921146608737883 0.08432920756864419 0.9438714419765777 ['ENSG00000162753|ENST00000367714|SLC9C2'] 64299 16411 LQLWQERERRQ True NCI_RA007_Epitope_Rep2 1540.8222573504 1540.82116993586 68.564 2 -0.3292596963783479 0.08432920756864419 0.9438714419765777 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000467201.5_1_7:100174858-100176198:-|nuORF', 'ENST00000498539.1_1_7:100174858-100175272:-|nuORF'] 116906 14243 TYPDVNNSI True PC9_epitope_Rep2 1021.4716397340101 1021.47107496793 60.053 1 -0.3292640984180246 0.08432920756864419 0.9438714419765777 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion', 'nc|ENSG00000122958|O75436-2|VPS26A', 'RBM25-VPS26A|1|fusion', 'VPS26A|p.L154F|1|0.18|ENSG00000122958|chr10:69158120-69158120|C/T|missense_variant'] 46145 15137 ITASPISDLNP True PC9_epitope_Rep2 1126.58700383942 1126.5859099358602 63.484 2 -0.32927295943309887 0.08432920756864419 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 135027 7224 YAHPSGTAL True PC9_epitope_Rep5 915.4450310633499 915.44392993586 32.751 2 -0.3293419719373218 0.08436177401572002 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1', 'ENST00000513842.1_1_4:7765494-7800689:-|nuORF'] 123667 17159 VINKVVFSL True PC9_epitope_Rep1 1017.6222671493299 1017.6211699358599 70.823 2 -0.3293473106471504 0.08436177401572002 0.9438714419765777 ['ENSG00000273540|ENST00000614907|AGBL1', 'nc|ENSG00000273540|Q96MI9|AGBL1'] 20103 6056 ENIRKQFQSQ True NCI_RA007_Epitope_Rep1 1276.6523980606398 1276.6513099358601 27.595 2 -0.32936509500668254 0.08439583889037076 0.9438714419765777 ['ENSG00000038210|ENST00000264864|PI4K2B'] 66221 9594 LSPSCSLSLP True PC9_epitope_Rep3 1002.50558271458 1002.50448993586 41.856 2 -0.3294497380986306 0.08440911838970092 0.9438714419765777 ['ENST00000487682.5_1_1:156905794-156908468:-|nuORF'] 101006 11420 SLTELSLIQ True H1975_Epitope_Rep1 1002.55972646242 1002.5591749679301 48.907 1 -0.32947361472372344 0.08440911838970092 0.9438714419765777 ['TLR8|p.H576Kfs*4|1|0.29|ENSG00000101916|chrX:12920764-12920765|-/TAAAT|frameshift_variant', 'ENSG00000101916|ENST00000218032|TLR8', 'nc|ENSG00000101916|Q9NR97-2|TLR8'] 17423 4967 EHFPNHQQL True PC9_epitope_Rep6 1148.53630567924 1148.53465490379 26.682 3 -0.3294881097531259 0.08440911838970092 0.9438714419765777 ['ENSG00000162378|ENST00000294353|ZYG11B'] 19489 16332 ELQFRLGP True PC9_epitope_Rep3 958.5236157372199 958.52250993586 67.956 2 -0.32949328870469824 0.08442389758179232 0.9438714419765777 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 8959 9669 AVGVLKAV True PC9_epitope_Rep5 755.49052470379 755.48942993586 42.158 2 -0.32950017768088014 0.08442389758179232 0.9438714419765777 ['ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF', 'ENST00000468035.1_1_7:77394853-77402638:+|nuORF', 'ENST00000462800.1_1_7:77397938-77402638:+|nuORF', 'ENSG00000187257|ENST00000334955|RSBN1L', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L'] 43112 13625 IGMEEHPEL True PC9_epitope_Rep1 1053.48009624273 1053.47898993586 57.265 2 -0.3295928252467553 0.08445645602930195 0.9438714419765777 ['ENSG00000157483|ENST00000288235|MYO1E'] 82519 14038 PVFAKTVSI True NCI_RA007_Epitope_Rep5 960.5644179200399 960.56332993586 60.688 2 -0.32964741276054743 0.08445645602930195 0.9438714419765777 ['ENSG00000181631|ENST00000325602|P2RY13', 'nc|ENSG00000181631|Q9BPV8-2|P2RY13', 'P2RY13|p.F268Lfs*48|1|0.31|ENSG00000181631|chr3:151328252-151328252|A/-|frameshift_variant'] 68447 10105 LTTRRLGT True NCI_RA007_Epitope_Rep5 916.5454138109599 916.54430993586 45.504 2 -0.32970507745625444 0.08447273438472343 0.9438714419765777 ['ENSG00000185002|ENST00000332958|RFX6', 'RFX4|p.Q113L|1|0.35|ENSG00000111783|chr12:106682015-106682015|A/T|missense_variant', 'nc|ENSG00000111783|Q33E94-4|RFX4', 'ENST00000536688.5_1_12:106995054-107126892:+|nuORF', 'ENSG00000111783|ENST00000392842|RFX4', 'nc|ENSG00000111783|Q33E94-2|RFX4'] 24400 12439 FAFNLYRRF True PC9_epitope_Rep3 1232.6454622054 1232.6438249037901 52.872 3 -0.32972275907170967 0.0844890121612972 0.9438714419765777 ['ENSG00000123561|ENST00000372563|SERPINA7', 'CON__Q9TT36'] 118201 20556 VAWGLLWLLL True PC9_epitope_Rep5 1182.71650188734 1182.7154099358602 84.113 2 -0.3298356538659125 0.08450228456628799 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4'] 108606 9981 TEILSLEKP True H1975_Epitope_Rep3 1028.57537652656 1028.57426993586 43.428 2 -0.3298503336732306 0.08450228456628799 0.9438714419765777 ['nc|ENSG00000196290|Q9GZT8-2|NIF3L1', 'ENSG00000196290|ENST00000409020|NIF3L1'] 86308 10892 QQHAILVDL True NCI_RA007_Epitope_Rep3 1035.5712942056298 1035.57018993586 49.918 2 -0.3298527014748802 0.08450228456628799 0.9438714419765777 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 67642 17940 LTFDLWPW True PC9_epitope_Rep1 1076.5331177917599 1076.53202993586 73.798 2 -0.32992451501197234 0.08458516293043679 0.9438714419765777 ['ENST00000483222.5_1_22:50686861-50687933:-|nuORF'] 44152 20080 ILPQDKVII True PC9_epitope_Rep1 1037.6484818971699 1037.64738993586 82.065 2 -0.32992884369279635 0.08458516293043679 0.9438714419765777 ['ATP13A3|p.W1027Lfs*9|1|0.25|ENSG00000133657|chr3:194427120-194427121|-/A|frameshift_variant', 'nc|ENSG00000133657|Q9H7F0|ATP13A3', 'ENSG00000133657|ENST00000645319|ATP13A3', 'nc|ENSG00000133657|Q9H7F0-2|ATP13A3', 'ENST00000484023.1_1_3:194151670-194152613:-|nuORF'] 136532 7801 YHQQPWRP True PC9_epitope_Rep2 1110.5359117564199 1110.53480993586 35.377 2 -0.32994879730306226 0.08458516293043679 0.9438714419765777 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:7043201-7117719:-|nuORF'] 105018 10818 STIHEKAMIQ True NCI_RA007_Epitope_Rep4 1156.5910436740398 1156.5899499358602 48.459 2 -0.3299530280910518 0.08458516293043679 0.9438714419765777 ['ENSG00000175267|ENST00000389398|VWA3A', 'VWA3A|p.P1114Lfs*14|1|0.24|ENSG00000175267|chr16:22152568-22152568|C/-|frameshift_variant', 'nc|ENSG00000175267|A6NCI4-2|VWA3A'] 12615 18452 DLEAVLESSEE True PC9_epitope_Rep5 1219.54559251991 1219.5444899358602 75.998 2 -0.33000409886532334 0.08460143639337268 0.9438714419765777 ['ENSG00000050555|ENST00000361069|LAMC3'] 131721 19616 VWVWVCLRRRL True NCI_RA007_Epitope_Rep2 1484.8550781321599 1484.85398993586 81.25 2 -0.33016800561620063 0.0846532629370878 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 66372 4907 LSQYQQPDRR True PC9_epitope_Rep3 1289.6476470333698 1289.64601490379 23.972 3 -0.3302193014786925 0.08468731112454225 0.9438714419765777 ['ENST00000006750.7_1_17:62007703-62009599:-|nuORF', 'ENST00000392795.7_1_17:62007703-62009599:-|nuORF'] 12069 15797 DIEMMLLL True PC9_epitope_Rep5 976.4973265299999 976.49622993586 65.751 2 -0.33041304280063993 0.08477468669451604 0.9438714419765777 ['ENST00000261590.12_1_18:29126842-29127004:+|nuORF'] 39576 19216 HPILNDPIY True PC9_epitope_Rep4 1080.56039516876 1080.55928993586 82.015 2 -0.3305417613625996 0.08480873151308305 0.9438714419765777 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 104710 3435 STCYSLCRRP True NCI_RA007_Epitope_Rep2 1184.5430479357997 1184.54140490379 18.018 3 -0.33054855244410564 0.08482499955561086 0.9438714419765777 ['ENST00000424185.6_2_13:111291157-111291343:+|nuORF'] 128375 4786 VSDQVQIK True NCI_RA007_Epitope_Rep5 915.50254593947 915.50144993586 25.094 2 -0.3306058257110366 0.08484126701980163 0.9438714419765777 ['nc|ENSG00000108588|Q96A33-2|CCDC47', 'ENSG00000108588|ENST00000225726|CCDC47'] 135341 17101 YDDKIYYF True NCI_RA007_Epitope_Rep3 1125.5018772331298 1125.5007899358602 75.139 2 -0.3306498413278728 0.08489308377326295 0.9438714419765777 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 36217 17317 GVGAVNISV True PC9_epitope_Rep2 814.45486747106 814.45376993586 71.868 2 -0.3307720474603899 0.08490934944898684 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'ENST00000550153.1_1_12:52641566-52642541:+|nuORF', 'ENST00000549638.1_1_12:52641943-52642541:+|nuORF'] 37649 8761 HAELERKI True PC9_epitope_Rep6 994.5559784946599 994.55488993586 43.594 2 -0.330773119610591 0.08492259566677923 0.9438714419765777 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'nc|ENSG00000102755|P17948-7|FLT1', 'nc|ENSG00000102755|P17948-8|FLT1'] 22484 5678 ETHRTRYERQD True NCI_RA007_Epitope_Rep1 1489.7022017873699 1489.70056490379 26.145 3 -0.33078382666885237 0.08492259566677923 0.9438714419765777 ['ENST00000481546.1_1_21:46194457-46194526:-|nuORF'] 15799 5508 EDGRRWLVP True H1975_Epitope_Rep2 1126.5883412521 1126.58668490379 26.199 3 -0.3308207627451089 0.08492259566677923 0.9438714419765777 ['RIMBP3|p.G887W|1|0.14|ENSG00000275793|chr22:18608776-18608776|C/A|missense_variant'] 134151 10978 WRGRWRWWEHK True NCI_RA007_Epitope_Rep1 1681.8490812349298 1681.8474449037901 46.697 3 -0.3308700873249697 0.08495512307829023 0.9438714419765777 ['ENST00000361226.7_1_9:35546604-35546643:+|nuORF'] 10737 8558 CVTKYYRWMQK True NCI_RA007_Epitope_Rep1 1504.73191133464 1504.7302649037902 37.292 3 -0.33087171973076496 0.08495512307829023 0.9438714419765777 ['nc|ENSG00000151322|Q8IXF0-4|NPAS3', 'nc|ENSG00000151322|Q8IXF0-2|NPAS3', 'nc|ENSG00000151322|Q8IXF0-3|NPAS3', 'ENSG00000151322|ENST00000356141|NPAS3'] 129801 17854 VTLARSLVVL True PC9_epitope_Rep3 1069.68593003505 1069.68482993586 73.87 2 -0.33091648352794095 0.0849562868718459 0.9438714419765777 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'TOGARAM2|p.G616Rfs*15|1|0.23|ENSG00000189350|chr2:29024366-29024367|-/C|frameshift_variant', 'nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2'] 65812 9911 LSKEDIQDIVY True H1975_Epitope_Rep3 1321.67654711981 1321.6754499358601 43.155 2 -0.33097574972794847 0.0849562868718459 0.9438714419765777 ['PMS1|p.I901V|1|0.16|ENSG00000064933|chr2:189877338-189877338|A/G|missense_variant'] 73095 7173 NDPRWKRYRRW True H1975_Epitope_Rep1 1631.8545605381898 1631.8529249037902 32.612 3 -0.3310056041388204 0.0849562868718459 0.9438714419765777 ['nc|ENSG00000059769|Q9H1X3-2|DNAJC25', 'ENST00000463589.5_1_9:114405367-114415499:+|nuORF', 'ENSG00000059769|ENST00000313525|DNAJC25'] 30238 15384 GAACVANWAL True PC9_epitope_Rep2 974.4643866089399 974.46328993586 64.456 2 -0.33104349711385195 0.0849562868718459 0.9438714419765777 ['ENST00000333337.3_1_21:34401273-34401336:+|nuORF'] 2522 8491 AEQTKWSKES True H1975_Epitope_Rep2 1192.5724164044398 1192.5713099358602 37.612 2 -0.3310672038893729 0.0849562868718459 0.9438714419765777 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|169|3|sense'] 23461 18034 EVWRQRYQSHP True PC9_epitope_Rep2 1484.7272943364 1484.72563490379 74.673 3 -0.33108197925442445 0.0849562868718459 0.9438714419765777 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 128837 13621 VSSGQNLLAV True PC9_epitope_Rep4 986.5396597241798 986.53856993586 60.287 2 -0.33109208412779273 0.0849562868718459 0.9438714419765777 ['ENSG00000169410|ENST00000618819|PTPN9'] 66775 8368 LSVASKNVG True PC9_epitope_Rep4 873.49198125577 873.49088993586 39.645 2 -0.33113182481876574 0.0849562868718459 0.9438714419765777 ['ENST00000392459.3_1_6:127676988-127677414:+|nuORF'] 44650 16979 IPLDPVAG True PC9_epitope_Rep5 780.4381547777599 780.43704993586 70.327 2 -0.3311435953889647 0.0849562868718459 0.9438714419765777 ['CON__P12763'] 30854 7056 GAQSLQREL True NCI_RA007_Epitope_Rep4 1000.53015766964 1000.52906993586 33.765 2 -0.3312056433101296 0.0849562868718459 0.9438714419765777 ['ENST00000479606.5_1_22:21351676-21351817:+|nuORF'] 83589 17347 QDTDWKELY True H1975_Epitope_Rep3 1196.5349682665599 1196.5338699358601 72.378 2 -0.331257541106494 0.0849562868718459 0.9438714419765777 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 78633 5825 PDVRRPPP True H1975_Epitope_Rep3 932.5191990631199 932.51810993586 27.426 2 -0.3313251652629321 0.08499031575954653 0.9438714419765777 ['ENST00000566012.1_1_16:30077179-30079547:+|nuORF'] 8498 8441 ATVLGTEIVA True H1975_Epitope_Rep3 972.54916177872 972.54806993586 37.454 2 -0.33145167438027384 0.08505836990707014 0.9438714419765777 ['ENSG00000164002|ENST00000415550|EXO5'] 33328 17683 GLDQSLVSL True PC9_epitope_Rep6 930.5022115863 930.50110993586 80.653 2 -0.3314802710441033 0.08505836990707014 0.9438714419765777 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1'] 46610 13176 ITSYPGSSYI True NCI_RA007_Epitope_Rep3 1086.5233409537 1086.5222499358601 59.101 2 -0.3315145529788196 0.08507462686567165 0.9438714419765777 ['NOL9-DNAJC11|2|fusion', 'ENST00000460777.1_1_1:6609570-6610501:-|nuORF', 'ENST00000464665.1_1_1:6609570-6614245:-|nuORF', 'ENSG00000162408|ENST00000377705|NOL9'] 17021 7295 EGLQSILHK True NCI_RA007_Epitope_Rep2 1023.5712942056299 1023.57018993586 32.996 2 -0.33160384002224635 0.08514267438968054 0.9438714419765777 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 117488 7759 VAEKAGTF True PC9_epitope_Rep1 821.42831837005 821.4272299358599 34.666 2 -0.3316527140474974 0.08514267438968054 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'nc|ENSG00000196655|Q9Y296-2|TRAPPC4'] 140312 13172 YYDPKHVIF True PC9_epitope_Rep6 1180.59169529704 1180.5900449037902 62.31 3 -0.3316766926914616 0.08515590299369281 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 97539 8065 SGTSDPYVKI True NCI_RA007_Epitope_Rep4 1065.5342399905699 1065.5331499358601 37.8 2 -0.3317757381760474 0.08515590299369281 0.9438714419765777 ['ENSG00000170743|ENST00000318881|SYT9'] 138040 4223 YQDPHSTAV True PC9_epitope_Rep4 1016.45632402304 1016.45522993586 22.618 2 -0.3318068124177707 0.08515590299369281 0.9438714419765777 ['ENSG00000146648|ENST00000275493|EGFR'] 70349 14367 LYPRYPLKP True PC9_epitope_Rep3 1145.65971528721 1145.65807490379 60.355 3 -0.33194094381406614 0.08522545570834666 0.9438714419765777 ['ENST00000463092.5_1_1:45478988-45479057:+|nuORF'] 118748 14732 VEDLINIHFQR True NCI_RA007_Epitope_Rep2 1382.7306483813402 1382.7295499358602 61.976 2 -0.3319896828594499 0.08523867896036526 0.9438714419765777 ['ENSG00000123609|ENST00000243346|NMI'] 111442 11423 TLKSQLNSQ True PC9_epitope_Rep1 1017.54547338061 1017.54436993586 48.817 2 -0.33202490136112933 0.08523867896036526 0.9438714419765777 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 72728 8054 MYRRWWEQFVQ True PC9_epitope_Rep6 1627.77180200067 1627.7701649037901 40.471 3 -0.33204431679367247 0.08523867896036526 0.9438714419765777 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 64642 11882 LRGHRRRHR True NCI_RA007_Epitope_Rep5 1242.7394712163 1242.73783490379 52.359 3 -0.33214369330369364 0.08527269497246402 0.9438714419765777 ['ENST00000481474.5_1_6:28891330-28891657:-|nuORF'] 76377 4881 NSIERVHSLH True NCI_RA007_Epitope_Rep4 1190.6156186291 1190.61397490379 25.224 3 -0.33228891842358865 0.08528136990194685 0.9438714419765777 ['ENST00000428210.5_1_2:61721024-61721165:-|nuORF'] 57856 10856 LEQEHIELEG True NCI_RA007_Epitope_Rep3 1195.57208205127 1195.57098993586 49.759 2 -0.3322999916553488 0.08528136990194685 0.9438714419765777 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant'] 139578 19161 YTNWYLESL True PC9_epitope_Rep3 1187.5498900547097 1187.5487899358602 78.922 2 -0.33232827770660306 0.08528136990194685 0.9438714419765777 ['NCKAP1L|p.G924Dfs*20|1|0.23|ENSG00000123338|chr12:54531813-54531813|G/-|frameshift_variant', 'NCKAP1L|p.N982Ifs*2|1|0.16|ENSG00000123338|chr12:54535185-54535185|A/-|frameshift_variant', 'nc|ENSG00000123338|P55160-2|NCKAP1L', 'ENSG00000123338|ENST00000293373|NCKAP1L'] 28304 13379 FRYMRIYRRYI True NCI_RA007_Epitope_Rep2 1635.8820211559898 1635.8809299358602 56.681 2 -0.33233505919732304 0.08528136990194685 0.9438714419765777 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 59283 18291 LGGVGSLSL True PC9_epitope_Rep3 801.4596184983301 801.4590749679301 75.562 1 -0.3323714048458765 0.08528136990194685 0.9438714419765777 ['ENST00000409106.5_2_2:114513945-114514152:-|nuORF'] 25083 6027 FDGVEGPR True NCI_RA007_Epitope_Rep2 875.4137309350699 875.41262993586 28.053 2 -0.3323987084207283 0.08528136990194685 0.9438714419765777 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 95692 10573 SAYDGKDYIA True PC9_epitope_Rep3 1101.49785448185 1101.4967499358602 45.615 2 -0.33250726663734237 0.08534635879218472 0.9438714419765777 ['ENSG00000204525|ENST00000376228|HLA-C', 'ENST00000487245.5_1_6:31236948-31239147:-|nuORF', 'nc|ENSG00000204525|P10321-2|HLA-C'] 12536 9235 DLASVDYDP True H1975_Epitope_Rep1 993.4291062156899 993.42800993586 40.432 2 -0.33256159184767214 0.08534635879218472 0.9438714419765777 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'ENST00000443361.1_1_9:108285096-108287232:+|nuORF'] 130565 15913 VTYQQHIP True PC9_epitope_Rep1 984.5028802926399 984.50178993586 66.02 2 -0.33257762973784694 0.08534635879218472 0.9438714419765777 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 76913 12331 NVLMFHFEHIK True H1975_Epitope_Rep1 1413.7227265499298 1413.7216299358602 52.461 2 -0.33261649468918525 0.08534635879218472 0.9438714419765777 ['FBXW10|p.Q682H|1|0.04|ENSG00000171931|chr17:18772451-18772451|G/C|missense_variant'] 68870 16709 LVEEYVEKVP True PC9_epitope_Rep1 1203.6387050591097 1203.6376099358602 69.099 2 -0.3326640153196964 0.08536260457185485 0.9438714419765777 ['ENST00000575090.1_1_17:79781125-79781671:-|nuORF', 'ENSG00000225663|ENST00000455127|MCRIP1', 'ENST00000576679.1_2_17:79781125-79782334:-|nuORF'] 14697 11634 DVPQSPPESP True H1975_Epitope_Rep1 1051.48220441771 1051.48110993586 49.74 2 -0.33271129029024904 0.08536823598359054 0.9438714419765777 ['ENSG00000214872|ENST00000527972|SMTNL1'] 72725 8475 MYRRWWEQFVQ True PC9_epitope_Rep4 1627.77180200067 1627.7701649037901 40.068 3 -0.33276193520663244 0.08536823598359054 0.9438714419765777 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 126407 18592 VPLLGGLL True H1975_Epitope_Rep1 780.5109257952 780.51037496793 77.527 1 -0.3327727785038645 0.08536823598359054 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant'] 6562 4854 APVSGGVGA True PC9_epitope_Rep4 713.37080349393 713.37025496793 25.26 1 -0.33278160055668177 0.08536823598359054 0.9438714419765777 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 13763 8325 DQNFGKQDAT True H1975_Epitope_Rep2 1122.4941660837399 1122.4930699358601 36.972 2 -0.33280338341749083 0.08536823598359054 0.9438714419765777 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000411772.5_2_15:43699583-43738985:-|nuORF', 'ENST00000572085.5_1_15:43707600-43785241:-|nuORF', 'nc|ENSG00000067369|Q12888-3|TP53BP1'] 74925 18496 NLSRRVWELL True PC9_epitope_Rep5 1284.7302544585198 1284.72914993586 76.168 2 -0.3328723996509673 0.08536823598359054 0.9438714419765777 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 32748 5880 GHYTEGAEL True PC9_epitope_Rep2 975.4297749220299 975.42866993586 28.012 2 -0.3328963601826459 0.08536823598359054 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENSG00000104833|ENST00000264071|TUBB4A', 'ENST00000604929.1_1_9:140136931-140138005:+|nuORF', 'ENSG00000137267|ENST00000333628|TUBB2A', 'ENSG00000137285|ENST00000259818|TUBB2B', 'TUBB8|p.M330Ifs*20|1|0.31|ENSG00000261456|chr10:47402-47402|C/-|frameshift_variant', 'ENST00000404155.1_1_6:3177457-3179994:-|nuORF', 'ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF', 'ENSG00000258947|ENST00000315491|TUBB3', 'nc|ENSG00000258947|Q13509-2|TUBB3', 'ENSG00000101162|ENST00000217133|TUBB1', 'ENST00000417736.2_1_18:12308439-12326126:+|nuORF', 'ENSG00000176014|ENST00000317702|TUBB6', 'ENSG00000261456|ENST00000568584|TUBB8'] 61752 12065 LLIYKDRLRIN True PC9_epitope_Rep2 1415.8612686280696 1415.85961490379 51.721 3 -0.3329292886940273 0.08536823598359054 0.9438714419765777 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2'] 133401 9760 WFRMVLERRHF True H1975_Epitope_Rep3 1575.8245062798699 1575.82285490379 42.565 3 -0.3331444009236846 0.08545247904531894 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 72727 7974 MYRRWWEQFVQ True PC9_epitope_Rep6 1627.77180200067 1627.7701649037901 40.131 3 -0.333151060858303 0.08545247904531894 0.9438714419765777 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 16659 6451 EETLDEGPP True H1975_Epitope_Rep1 985.4240208352498 985.42292993586 29.875 2 -0.33315783491713463 0.08545247904531894 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 38527 3984 HHDSHSSVIL True PC9_epitope_Rep4 1130.5468703629401 1130.54521490379 21.553 3 -0.333209602864896 0.08546871947862839 0.9438714419765777 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 83745 5072 QEDDRYYTA True H1975_Epitope_Rep1 1159.47818166643 1159.47708993586 24.58 2 -0.3333156832271727 0.08553823205597187 0.9438714419765777 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN'] 126866 19537 VPTLVTPSA True PC9_epitope_Rep5 883.50148331031 883.50038993586 80.202 2 -0.333405431473796 0.08558846508985013 0.9438714419765777 ['ENST00000497399.1_1_10:97453347-97453710:-|nuORF', 'ENST00000478245.1_1_10:97452671-97453656:-|nuORF', 'nc|ENSG00000119977|Q6NUS6-4|TCTN3', 'nc|ENSG00000119977|Q6NUS6-2|TCTN3', 'nc|ENSG00000119977|Q6NUS6-5|TCTN3', 'ENSG00000119977|ENST00000371217|TCTN3'] 35257 22384 GSLFTLMVVT True PC9_epitope_Rep4 1066.5732683515798 1066.57216993586 94.334 2 -0.33343274030717207 0.08558846508985013 0.9438714419765777 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|329|3|anti-sense'] 85752 14023 QLVERLVAV True PC9_epitope_Rep4 1025.6233297784897 1025.62222993586 61.85 2 -0.33343718268746536 0.08560166196132744 0.9438714419765777 ['ENST00000592802.1_1_17:73847561-73851408:-|nuORF'] 140247 11325 YWRRDLERALY True H1975_Epitope_Rep3 1539.7946456202299 1539.79300490379 48.67 3 -0.33344109512171416 0.08560166196132744 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 140233 18040 YWMHVQNTF True PC9_epitope_Rep4 1224.53861417836 1224.53750993586 77.457 2 -0.3334488523613767 0.08560166196132744 0.9438714419765777 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24'] 108525 9506 TEFQRRVSK True H1975_Epitope_Rep1 1149.6254550368099 1149.6243499358602 41.485 2 -0.33356402568944854 0.08563413291667406 0.9438714419765777 ['ENST00000506547.5_1_4:81117206-81117508:+|nuORF'] 5887 9985 APGSDPESSL True PC9_epitope_Rep2 958.42435518842 958.42324993586 43.737 2 -0.3336004547788566 0.08563413291667406 0.9438714419765777 ['CON__Q2HJF0'] 136245 10976 YGRADIAV True PC9_epitope_Rep1 863.4501164437899 863.44900993586 47.108 2 -0.33362394804605255 0.08565036752956216 0.9438714419765777 ['nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3'] 399 12337 AALGTMTSL True NCI_RA007_Epitope_Rep5 863.4422541820301 863.44170496793 54.103 1 -0.33367668580282295 0.08568435630204357 0.9438714419765777 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'ENST00000496783.1_1_21:43708308-43714771:+|nuORF', 'nc|ENSG00000160179|P45844-8|ABCG1', 'ENST00000472587.5_1_21:43696971-43716499:+|nuORF'] 38574 7185 HHGAEDATDAF True NCI_RA007_Epitope_Rep5 1169.47376499233 1169.47266993586 34.316 2 -0.3338386743289424 0.08569754642616198 0.9438714419765777 ['ENSG00000221968|ENST00000278829|FADS3', 'ENST00000414624.6_1_11:61645294-61658904:-|nuORF'] 40250 11355 HRIQDLEQL True PC9_epitope_Rep4 1150.6094706195 1150.60783490379 51.454 3 -0.3338596578126786 0.08569754642616198 0.9438714419765777 ['ENSG00000113734|ENST00000351486|BNIP1', 'nc|ENSG00000113734|Q12981-2|BNIP1'] 110185 15510 TIDPSNPMV True PC9_epitope_Rep2 972.45863252216 972.45752993586 64.933 2 -0.3338690555524786 0.08569754642616198 0.9438714419765777 ['ENSG00000198730|ENST00000361367|CTR9'] 17966 11177 EIFHSKRRRPS True NCI_RA007_Epitope_Rep1 1411.7796642624298 1411.77856993586 47.475 2 -0.3338885424764108 0.08571377847213592 0.9438714419765777 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1'] 117339 14691 VAANPLLL True NCI_RA007_Epitope_Rep4 809.50108938749 809.5005449679301 63.925 1 -0.3339250945692391 0.08576551626189462 0.9438714419765777 ['ENSG00000157570|ENST00000520358|TSPAN18'] 114480 4607 TSEVVAIK True NCI_RA007_Epitope_Rep1 845.4858332461698 845.48472993586 22.011 2 -0.3339719968556254 0.08579493005751615 0.9438714419765777 ['ENSG00000135090|ENST00000392533|TAOK3', 'TAOK3|p.T656*|1|0.79|ENSG00000135090|chr12:118161955-118161964|CTCGGGTGGA/-|frameshift_variant'] 79987 17301 PIYVEVSIL True NCI_RA007_Epitope_Rep4 1031.5902983147098 1031.58920993586 74.916 2 -0.3340257578180152 0.08579493005751615 0.9438714419765777 ['ENSG00000116996|ENST00000366570|ZP4'] 847 11040 ADGHGSIEI True PC9_epitope_Rep2 897.4192102383299 897.41810993586 47.784 2 -0.33403066732519443 0.08579493005751615 0.9438714419765777 ['ENST00000540925.5_1_11:113745483-113746238:-|nuORF'] 69308 14865 LVPPDQPEV True PC9_epitope_Rep1 992.51786165044 992.51676993586 61.997 2 -0.3340426072724471 0.08579493005751615 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 33934 13916 GMYLGEIVRQ True PC9_epitope_Rep2 1164.59612905448 1164.59502993586 58.807 2 -0.334085414015538 0.08582891023023805 0.9438714419765777 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000470920.1_1_10:71018680-71021051:+|nuORF'] 62662 9882 LLVVQEEAA True PC9_epitope_Rep4 970.5335117145798 970.53240993586 45.661 2 -0.33418941749684256 0.08585984095427436 0.9438714419765777 ['ENST00000581560.5_1_17:16335592-16336976:+|nuORF'] 94253 5680 RWRRQQERRQQ True NCI_RA007_Epitope_Rep4 1625.87233586065 1625.8706849037903 28.455 3 -0.33419296089741396 0.08585984095427436 0.9438714419765777 ['RASIP1|p.R336W|1|0.24|ENSG00000105538|chr19:48735369-48735369|G/A|missense_variant'] 127176 7420 VQFAAEYRR True PC9_epitope_Rep5 1138.5883412520998 1138.58668490379 33.497 3 -0.3342558503082601 0.08585984095427436 0.9438714419765777 ['ENST00000333017.6_1_2:99863168-99871557:-|nuORF'] 14596 13444 DVIEEYFK True NCI_RA007_Epitope_Rep2 1041.50187723313 1041.5007899358602 56.937 2 -0.3342877224323434 0.08587606723822709 0.9438714419765777 ['ENSG00000112306|ENST00000230050|RPS12'] 56781 7335 LEATGEVQA True H1975_Epitope_Rep2 916.4501760134398 916.44906993586 33.154 2 -0.3344490742776034 0.08596176715951649 0.9438714419765777 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF'] 89536 3561 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5870849037901 19.715 3 -0.33445803783023415 0.08596176715951649 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 19635 20557 ELRRLFRERYR True H1975_Epitope_Rep3 1592.9011763774397 1592.90006993586 85.923 2 -0.3345001869402278 0.08601196286895867 0.9438714419765777 ['ENSG00000184292|ENST00000371225|TACSTD2'] 496 5501 AAPAEEPAAAA True PC9_epitope_Rep6 967.4610750503098 967.45996993586 29.138 2 -0.33452204524756574 0.08601196286895867 0.9438714419765777 ['ENSG00000277443|ENST00000612661|MARCKS'] 56153 17712 LDNIELYWNSY True H1975_Epitope_Rep2 1428.6561460284 1428.65504993586 73.45 2 -0.33467909043208893 0.086072265209058 0.9438714419765777 ['nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000556716.5_1_14:21486897-21488105:-|nuORF', 'ENST00000554277.5_1_14:21487301-21489989:-|nuORF', 'nc|ENSG00000165795|Q9UN36-5|NDRG2', 'nc|ENSG00000165795|Q9UN36-3|NDRG2', 'ENST00000557416.5_1_14:21486655-21488105:-|nuORF'] 81332 4629 PPRPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 24.323 2 -0.33468409244819186 0.086072265209058 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 34174 9289 GPGAWRRP True H1975_Epitope_Rep2 895.4776686043099 895.47656993586 40.688 2 -0.3347032932217147 0.086072265209058 0.9438714419765777 ['ENST00000177694.1_1_17:45810693-45811185:+|nuORF'] 82902 8920 PVYRHTFWQFR True H1975_Epitope_Rep1 1535.77860163327 1535.77696490379 39.215 3 -0.3347352977114821 0.086072265209058 0.9438714419765777 ['nc|ENSG00000173950|Q8NBI6-2|XXYLT1', 'ENSG00000173950|ENST00000310380|XXYLT1', 'ACAP2-XXYLT1|1|fusion'] 98430 18775 SIIQVVLIL True PC9_epitope_Rep5 996.6583183048799 996.65722993586 77.231 2 -0.3347387506671416 0.086072265209058 0.9438714419765777 ['ENSG00000176294|ENST00000557677|OR4N2', 'ENSG00000279408|ENST00000623441|OR4N4C', 'ENSG00000183706|ENST00000328795|OR4N4'] 117207 4697 TYTFSTTKSVP True NCI_RA007_Epitope_Rep5 1230.61321858726 1230.6115649037902 24.753 3 -0.33475780123355947 0.086072265209058 0.9438714419765777 ['ENSG00000075420|ENST00000415807|FNDC3B', 'SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion'] 67525 6308 LTELQEKYK True NCI_RA007_Epitope_Rep1 1150.62338934814 1150.6217549037901 28.562 3 -0.334786640266693 0.086072265209058 0.9438714419765777 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128446747-128451900:+|nuORF'] 96347 10808 SEFMFEKAP True NCI_RA007_Epitope_Rep4 1084.4899326504399 1084.4888299358602 48.419 2 -0.33479963249172656 0.08608695652173913 0.9438714419765777 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 55376 17024 LASPLALL True H1975_Epitope_Rep2 796.50584041476 796.50529496793 70.738 1 -0.3348162041096867 0.08608695652173913 0.9438714419765777 ['Tigger1_dup324|chr1:83019440-83021751:-|3.250534866687885|0.2214501882032552|3.88|499.0|158|3|anti-sense'] 97482 7807 SGLPAAVAGT True PC9_epitope_Rep6 842.44978209062 842.44868993586 39.42 2 -0.33487235826431183 0.08611939239068711 0.9438714419765777 ['ENST00000423520.5_1_2:110371437-110371494:-|nuORF'] 31725 10851 GEISALTAEA True H1975_Epitope_Rep3 960.47639076128 960.47528993586 46.82 2 -0.3348826920658528 0.08611939239068711 0.9438714419765777 ['ENSG00000125968|ENST00000376112|ID1'] 128836 16304 VSSGQKQHV True PC9_epitope_Rep6 968.5039429218001 968.50284993586 75.075 2 -0.33490627771162734 0.08613408098803989 0.9438714419765777 ['ENST00000551617.1_1_12:100594834-100598785:+|nuORF'] 16900 18845 EGALTLAVQ True PC9_epitope_Rep1 900.4916469026 900.49109496793 77.272 1 -0.3349258463309813 0.08613408098803989 0.9438714419765777 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'ENST00000483412.5_1_9:123169248-123169542:-|nuORF'] 13565 8594 DPNDASTLK True PC9_epitope_Rep3 959.4559896698701 959.45488993586 38.007 2 -0.33498389391235417 0.08616498394165764 0.9438714419765777 ['ENSG00000213759|ENST00000446444|UGT2B11'] 127080 2555 VQADAPHGV True PC9_epitope_Rep4 892.44028003608 892.43918993586 14.738 2 -0.33498757578514593 0.08616498394165764 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 344 7939 AAKDAEKIREL True NCI_RA007_Epitope_Rep2 1242.6932002434598 1242.6915449037901 35.512 3 -0.33501929770318106 0.08616498394165764 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 44556 19249 IPDDFDWDLI True PC9_epitope_Rep6 1247.5710194221099 1247.56992993586 86.692 2 -0.33508965938801605 0.0861796696179847 0.9438714419765777 ['ENSG00000065970|ENST00000162391|FOXJ2', 'ENST00000539192.1_1_12:8202954-8205443:+|nuORF'] 124200 17449 VLAHYADVL True PC9_epitope_Rep1 999.5389314481899 999.53782993586 71.915 2 -0.3351181012029377 0.0861796696179847 0.9438714419765777 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 99258 7485 SLDC[Carbamidomethyl]EIVSAK True H1975_Epitope_Rep3 1120.5434250547098 1120.5423299358602 33.772 2 -0.33517034261561085 0.08619129570817735 0.9438714419765777 ['nc|ENSG00000131236|Q01518-2|CAP1', 'ENSG00000131236|ENST00000372805|CAP1', 'ENST00000494114.1_1_1:40536414-40537202:+|nuORF', 'ENST00000461993.1_1_1:40535258-40537202:+|nuORF', 'ENST00000476047.1_1_3:76483919-76484456:+|nuORF'] 67082 13527 LTCRWTEK True PC9_epitope_Rep1 1035.5171504577897 1035.51604993586 56.887 2 -0.33520026939549213 0.08619129570817735 0.9438714419765777 ['ENST00000500102.6_1_12:26109649-26110418:-|nuORF'] 92247 3736 RQKNKNVEI True NCI_RA007_Epitope_Rep4 1127.64110510095 1127.63944490379 20.516 3 -0.3352302491837418 0.08619129570817735 0.9438714419765777 ['ENSG00000187715|ENST00000405109|KBTBD12'] 51963 7653 KKWRDYYRRRH True NCI_RA007_Epitope_Rep5 1662.89675970334 1662.89512490379 36.14 3 -0.33523154548539935 0.08619129570817735 0.9438714419765777 ['MYO9A|p.Q1106K|2|0.81|ENSG00000066933|chr15:71899841-71899841|G/T|missense_variant'] 110716 5618 TKEHLQETDVV True H1975_Epitope_Rep3 1297.6513950011301 1297.6497449037902 26.646 3 -0.335234825177136 0.08620597888760756 0.9438714419765777 ['ENSG00000176896|ENST00000696128|TCEANC', 'nc|ENSG00000176896|Q8N8B7-2|TCEANC'] 129773 16176 VTKQVINGI True PC9_epitope_Rep5 970.5811306133398 970.58002993586 67.211 2 -0.3352477084219244 0.08620597888760756 0.9438714419765777 ['ENSG00000149218|ENST00000278505|ENDOD1'] 96991 11466 SEVM[Oxidation]EELEKVK True H1975_Epitope_Rep3 1335.6591831839498 1335.65808993586 49.225 2 -0.33537506656449245 0.08626164079822617 0.9438714419765777 ['ENSG00000114446|ENST00000264538|IFT57'] 119712 13136 VETFAFQA True H1975_Epitope_Rep3 911.4388830537499 911.43778993586 55.775 2 -0.33537551501947604 0.08626164079822617 0.9438714419765777 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'nc|ENSG00000224411|Q14568|HSP90AA2P', 'ENST00000556554.1_1_14:102552511-102553379:-|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 24019 23122 EYPFILDAF True PC9_epitope_Rep4 1113.5382627418498 1113.53767496793 97.158 1 -0.3353995487677667 0.08626164079822617 0.9438714419765777 ['ENSG00000039123|ENST00000230640|MTREX', 'ENST00000503165.5_1_5:54603841-54625205:+|nuORF'] 50507 17044 KKKKKKKKQ True PC9_epitope_Rep5 1170.8288463009799 1170.82720490379 70.578 3 -0.33540486637831135 0.08626164079822617 0.9438714419765777 ['ENSG00000147649|ENST00000336273|MTDH'] 17759 6239 EHTQTVSQL True PC9_epitope_Rep3 1041.50908787189 1041.50798993586 29.037 2 -0.3354279141012732 0.08626164079822617 0.9438714419765777 ['ENSG00000135968|ENST00000309863|GCC2'] 58248 7169 LETAAPAPRPY True NCI_RA007_Epitope_Rep1 1184.61897267404 1184.6178699358602 31.875 2 -0.33545029439773066 0.08626164079822617 0.9438714419765777 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 862 9084 ADIRGFVA True NCI_RA007_Epitope_Rep4 847.4552018242299 847.45410993586 41.775 2 -0.3354845918169436 0.08626164079822617 0.9438714419765777 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 106206 17815 SVPNKDVFQEL True PC9_epitope_Rep1 1274.65066672514 1274.6495699358602 73.32 2 -0.3355061282147099 0.08626164079822617 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 22527 19131 ETLDSAWL True PC9_epitope_Rep4 933.4443623570099 933.44326993586 81.68 2 -0.3355247580215343 0.08626164079822617 0.9438714419765777 ['ENST00000433031.1_1_7:57217543-57217852:-|nuORF'] 128003 23036 VRQLRLHHRRG True PC9_epitope_Rep4 1426.8494155880999 1426.84777490379 96.831 3 -0.3355433093611195 0.08626164079822617 0.9438714419765777 ['ENST00000307161.5_1_4:187455227-187455620:-|nuORF'] 128667 11831 VSLSVPQTP True H1975_Epitope_Rep2 926.50729696674 926.5067449679301 50.585 1 -0.3355781411086537 0.0862763183567767 0.9438714419765777 ['ENST00000472277.5_1_1:44440756-44442727:+|nuORF'] 48284 4866 KDLESGAHLT True H1975_Epitope_Rep2 1069.5403880001697 1069.53928993586 23.804 2 -0.33562202360581145 0.0862763183567767 0.9438714419765777 ['ENSG00000111012|ENST00000228606|CYP27B1'] 102282 6842 SPTSLAET True PC9_epitope_Rep4 804.38651312772 804.38540993586 33.539 2 -0.33566676138723633 0.0863102628684948 0.9438714419765777 ['nc|ENSG00000106991|P17813-2|ENG', 'ENSG00000106991|ENST00000373203|ENG'] 110656 11010 TIVPTTDIEP True NCI_RA007_Epitope_Rep5 1084.56520576568 1084.5641099358602 48.984 2 -0.3356815997503161 0.08632493792124867 0.9438714419765777 ['ENSG00000154175|ENST00000471714|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0-4|ABI3BP'] 17275 2631 EHDDEEELLK True NCI_RA007_Epitope_Rep5 1255.5568259099498 1255.5551849037902 14.808 3 -0.33568962925681145 0.08632493792124867 0.9438714419765777 ['CLSPN|p.D1031H|1|0.14|ENSG00000092853|chr1:35743193-35743193|C/G|missense_variant'] 67016 10385 LTALTEKSKL True H1975_Epitope_Rep3 1102.65977485686 1102.6586699358602 45.002 2 -0.3357552088754313 0.08635428490351874 0.9438714419765777 ['RYR1|p.R3707L|1|0.4|ENSG00000196218|chr19:38529036-38529036|G/T|missense_variant'] 106941 14291 SYKSMFQKL True PC9_epitope_Rep5 1130.57941636118 1130.57776490379 59.973 3 -0.3358373905225803 0.08635428490351874 0.9438714419765777 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF'] 6016 5196 APLLRHLGLTR True PC9_epitope_Rep6 1245.7669743204099 1245.76531490379 27.741 3 -0.3358478540114802 0.08635428490351874 0.9438714419765777 ['ENSG00000183615|ENST00000373582|FAM167B'] 46949 21571 IVLQTLAPSP True PC9_epitope_Rep1 1037.6120963884498 1037.61098993586 87.793 2 -0.3358868898942967 0.08635428490351874 0.9438714419765777 ['ENST00000511482.1_1_5:306832-313953:+|nuORF'] 11858 4334 DHNDGLGNAF True NCI_RA007_Epitope_Rep5 1058.44173658806 1058.4406299358602 23.275 2 -0.3359178551821505 0.08636895683325649 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 9126 15356 AVLQQHHVKL True PC9_epitope_Rep2 1171.68257599011 1171.68094490379 64.349 3 -0.33596484089881107 0.08636895683325649 0.9438714419765777 ['ENSG00000186648|ENST00000342740|CARMIL3'] 109908 7847 THPGYYAEL True PC9_epitope_Rep2 1049.48181049489 1049.4807099358602 35.553 2 -0.3359735369650381 0.0863836277222104 0.9438714419765777 ['nc|ENSG00000197226|Q66K14|TBC1D9B', 'ENSG00000197226|ENST00000355235|TBC1D9B'] 139621 11833 YTRQERYRARP True PC9_epitope_Rep1 1494.7803925384198 1494.77875490379 50.381 3 -0.33598354351375287 0.0863836277222104 0.9438714419765777 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 27214 19329 FLTWEVLS True H1975_Epitope_Rep2 993.5171333744499 993.51602993586 80.222 2 -0.3360677270037904 0.08639676544129382 0.9438714419765777 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|403|3|anti-sense'] 30302 6738 GAATHVVI True PC9_epitope_Rep4 766.43373810366 766.43264993586 33.109 2 -0.336121551030232 0.08639676544129382 0.9438714419765777 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 134621 9621 WWFRWRLDRYV True NCI_RA007_Epitope_Rep2 1681.8629999635698 1681.8613649037902 42.038 3 -0.33613753509356364 0.08639676544129382 0.9438714419765777 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 59517 13995 LGPRLVLA True PC9_epitope_Rep6 837.5436229058099 837.54252993586 65.689 2 -0.33616835384332155 0.08641296637820968 0.9438714419765777 ['ENSG00000170348|ENST00000303575|TMED10'] 128355 13627 VSDPNLIHV True PC9_epitope_Rep2 992.52909504048 992.52798993586 57.708 2 -0.3362851867928037 0.0864468994378735 0.9438714419765777 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 12968 8492 DLPGGSHRRVP True H1975_Epitope_Rep3 1189.63160304641 1189.6305099358601 37.65 2 -0.3364215421727669 0.0864908952286388 0.9438714419765777 ['ENST00000303277.6_1_4:1718988-1719900:-|nuORF'] 13753 19996 DQLLLVADL True PC9_epitope_Rep6 998.56481184286 998.56370993586 89.581 2 -0.3364311456391541 0.0864908952286388 0.9438714419765777 ['ENSG00000215251|ENST00000380266|FASTKD5'] 3037 12374 AFVGIKVNQ True PC9_epitope_Rep6 974.5549158654999 974.55380993586 59.001 2 -0.33644732835707625 0.0864908952286388 0.9438714419765777 ['ENSG00000164946|ENST00000380880|FREM1', 'ENST00000486223.1_1_9:14751839-14775864:-|nuORF', 'nc|ENSG00000164946|Q5H8C1-4|FREM1', 'nc|ENSG00000164946|Q5H8C1-2|FREM1'] 92574 1464 RRCHMVERLC True H1975_Epitope_Rep1 1301.6267350734497 1301.6250749037902 7.6113 3 -0.3364748773565247 0.0864908952286388 0.9438714419765777 ['ENSG00000105708|ENST00000344099|ZNF14'] 61507 16635 LLFTNETA True PC9_epitope_Rep5 907.46509780159 907.46400993586 68.992 2 -0.3365001050977099 0.0864908952286388 0.9438714419765777 ['ENSG00000086570|ENST00000261800|FAT2'] 91534 14684 RPADVIFAT True PC9_epitope_Rep5 988.5341804209199 988.5336349679301 61.487 1 -0.3365333649728119 0.0864908952286388 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 60703 14522 LIYGHWSI True PC9_epitope_Rep4 987.51780208079 987.51670993586 63.773 2 -0.3365368334077324 0.0865040246799759 0.9438714419765777 ['ENSG00000186010|ENST00000507754|NDUFA13', 'nc|ENSG00000186010|Q9P0J0-2|NDUFA13', 'ENST00000586674.1_1_19:19627047-19643527:+|nuORF', 'ENST00000511584.2_1_19:19627047-19637070:+|nuORF'] 125673 11365 VMSERQVTRVP True H1975_Epitope_Rep1 1300.69215469764 1300.69104993586 48.692 2 -0.3365698852660799 0.0865040246799759 0.9438714419765777 ['ENSG00000076356|ENST00000367033|PLXNA2'] 108411 5494 TEEDPVKPP True H1975_Epitope_Rep3 1010.4920408254198 1010.49094993586 26.187 2 -0.33658057958687043 0.0865040246799759 0.9438714419765777 ['nc|ENSG00000109458|Q13480-2|GAB1', 'ENSG00000109458|ENST00000262994|GAB1', 'GAB1|p.P311Qfs*24|1|0.19|ENSG00000109458|chr4:143438336-143438336|C/-|frameshift_variant'] 44020 5206 ILKKPPSP True H1975_Epitope_Rep2 878.5589386167799 878.55784993586 25.096 2 -0.3366075778483468 0.08653641585703141 0.9438714419765777 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B'] 83327 21830 QALSPLLSV True PC9_epitope_Rep1 926.5436824754601 926.5431349679301 88.778 1 -0.33661574929640525 0.08653641585703141 0.9438714419765777 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 33636 11745 GLNKEQSNLLP True NCI_RA007_Epitope_Rep4 1211.65100107831 1211.64990993586 52.147 2 -0.33666039088261795 0.08656880473708471 0.9438714419765777 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 94590 13937 RYKGPGFEYF True PC9_epitope_Rep6 1262.6084079903396 1262.6067749037902 65.454 3 -0.3366850537500946 0.08656880473708471 0.9438714419765777 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 86251 6222 QPYRYTVKA True PC9_epitope_Rep1 1124.59784330664 1124.5961849037901 28.747 3 -0.33673718262416386 0.08658346333853355 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 117918 14761 VAQLKQLQAET True PC9_epitope_Rep5 1227.6823012065897 1227.6812099358601 61.777 2 -0.33674861491966607 0.08658346333853355 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 47024 2668 IVRPVRRWRRV True NCI_RA007_Epitope_Rep5 1491.9375023165098 1491.9364099358602 14.955 2 -0.33678102534318005 0.08659505069843296 0.9438714419765777 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'nc|ENSG00000159322|Q9BRR6-6|ADPGK'] 46565 5793 ITRENLEA True NCI_RA007_Epitope_Rep3 944.4927095317598 944.49160993586 29.764 2 -0.33679336458911513 0.08659505069843296 0.9438714419765777 ['ENSG00000125901|ENST00000380325|MRPS26'] 17871 8693 EICVNNTP True PC9_epitope_Rep6 888.40111764604 888.40002993586 43.288 2 -0.3367992129102018 0.08659505069843296 0.9438714419765777 ['ENST00000336139.8_1_11:123597023-123597197:-|nuORF'] 95459 19858 SALPTVVAY True PC9_epitope_Rep6 919.5014833103098 919.5009349679301 89.043 1 -0.3368053368623637 0.08659505069843296 0.9438714419765777 ['ENSG00000104450|ENST00000388798|SPAG1', 'nc|ENSG00000104450|Q07617-2|SPAG1'] 106248 8903 SVQDLSTSV True PC9_epitope_Rep5 934.4607406971401 934.4596499358599 39.189 2 -0.3368455085512487 0.08662896850016841 0.9438714419765777 ['ENST00000234313.7_1_2:68622956-68623079:+|nuORF'] 102625 14182 SQCSQRSEDLY True H1975_Epitope_Rep2 1314.55102933686 1314.54992993586 59.703 2 -0.3368917873084232 0.08664515900308434 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000031900'] 73099 6181 NDQRALRKLQR True NCI_RA007_Epitope_Rep1 1396.8011279829998 1396.79947490379 28.078 3 -0.3369491568844758 0.08665827676055089 0.9438714419765777 ['ENST00000535413.1_1_12:121134228-121138519:+|nuORF'] 90169 12428 RHERTKFR True PC9_epitope_Rep5 1128.62645809632 1128.6248249037899 52.803 3 -0.33698930814045325 0.08665827676055089 0.9438714419765777 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 7732 13481 ASSICVLPST True PC9_epitope_Rep6 976.48993265044 976.4888299358599 63.548 2 -0.3369929575498289 0.08665827676055089 0.9438714419765777 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 56167 17652 LDNLRRVMP True PC9_epitope_Rep1 1112.61244782496 1112.61134993586 72.691 2 -0.3370286507629166 0.08669219043567655 0.9438714419765777 ['ENSG00000123307|ENST00000242994|NEUROD4'] 89927 14096 RFVEKYTEL True PC9_epitope_Rep3 1183.62372370131 1183.62208490379 59.305 3 -0.33710079329176046 0.08672456575682382 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 126221 11618 VPGTEPEKDP True H1975_Epitope_Rep2 1067.51350454599 1067.5124099358602 49.756 2 -0.3371087841088529 0.08672456575682382 0.9438714419765777 ['ENSG00000189114|ENST00000433642|BLOC1S3'] 39652 17603 HPRTSAQIHLL True PC9_epitope_Rep5 1271.7098533671099 1271.7087499358602 72.719 2 -0.3371788954258326 0.0867731244350708 0.9438714419765777 ['nc|ENSG00000130714|Q9Y6A1-4|POMT1', 'nc|ENSG00000130714|Q9Y6A1-3|POMT1', 'ENSG00000130714|ENST00000402686|POMT1', 'nc|ENSG00000130714|Q9Y6A1|POMT1'] 67759 15465 LTGTWTSV True PC9_epitope_Rep2 863.43888305375 863.43778993586 64.763 2 -0.3371864859269928 0.0867731244350708 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 17870 8615 EICVNNTP True PC9_epitope_Rep6 888.40111764604 888.40002993586 42.953 2 -0.337298647516307 0.0867731244350708 0.9438714419765777 ['ENST00000336139.8_1_11:123597023-123597197:-|nuORF'] 122443 13840 VGSLGTIII True NCI_RA007_Epitope_Rep3 871.53786881903 871.53676993586 61.77 2 -0.33742240525025324 0.08682321665928223 0.9438714419765777 ['ENSG00000104643|ENST00000221086|MTMR9'] 57480 12142 LEKHYLDI True PC9_epitope_Rep1 1029.5494961318898 1029.54838993586 51.566 2 -0.33742828294146826 0.08682321665928223 0.9438714419765777 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 83545 23005 QDMQGEPGLL True PC9_epitope_Rep3 1086.5015599632998 1086.50046993586 93.754 2 -0.3375307958111048 0.08683632239313815 0.9438714419765777 ['ENSG00000070601|ENST00000377765|FRMPD1'] 12981 16771 DLPSAEELEDW True NCI_RA007_Epitope_Rep3 1302.56157693722 1302.56046993586 73.817 2 -0.3375563607188646 0.08683632239313815 0.9438714419765777 ['ENSG00000143318|ENST00000368078|CASQ1'] 12711 15046 DLFQDYERWVR True PC9_epitope_Rep5 1525.73137665733 1525.7297249037902 62.879 3 -0.3376141867462272 0.08683632239313815 0.9438714419765777 ['ENSG00000169684|ENST00000299565|CHRNA5'] 120506 19419 VFYCSSTVWNF True PC9_epitope_Rep4 1351.5907093208696 1351.5896099358602 82.808 2 -0.3376572840792042 0.08687022630207872 0.9438714419765777 ['MS4A13|p.R106Gfs*71|1|0.16|ENSG00000204979|chr11:60529371-60529371|G/-|frameshift_variant'] 42081 7555 IEEHHFYFN True NCI_RA007_Epitope_Rep2 1234.54072235334 1234.5396299358601 34.013 2 -0.3377490997768821 0.08688332860788205 0.9438714419765777 ['ENSG00000071991|ENST00000262150|CDH19'] 57903 16235 LEQKDVNSL True PC9_epitope_Rep2 1044.54513902744 1044.5440499358601 67.693 2 -0.3377543364161711 0.08688332860788205 0.9438714419765777 ['ENSG00000123545|ENST00000316149|NDUFAF4'] 46346 16061 ITGGNKTDIL True PC9_epitope_Rep2 1030.56587447202 1030.56476993586 67.034 2 -0.33775960177092657 0.08688332860788205 0.9438714419765777 ['ENSG00000198691|ENST00000370225|ABCA4'] 123757 5655 VISASLGTAQP True NCI_RA007_Epitope_Rep4 1042.56587447202 1042.56476993586 28.358 2 -0.33778813561386445 0.08690952904071725 0.9438714419765777 ['ENSG00000112624|ENST00000314073|BICRAL'] 16901 18379 EGALTLAVQ True PC9_epitope_Rep2 900.4916469026 900.49109496793 76.026 1 -0.33780521130456503 0.08690952904071725 0.9438714419765777 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'ENST00000483412.5_1_9:123169248-123169542:-|nuORF'] 47263 21428 IYEPNFIFF True NCI_RA007_Epitope_Rep5 1188.5855472874398 1188.5844499358602 89.485 2 -0.3378097689284282 0.08690952904071725 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 89543 3749 RERRDNYVP True NCI_RA007_Epitope_Rep2 1203.6108676018298 1203.60922490379 19.224 3 -0.3378192209323967 0.08690952904071725 0.9438714419765777 ['ENST00000561068.5_3_15:83205554-83208094:-|nuORF', 'ENSG00000182774|ENST00000647841|RPS17', 'ENST00000561440.1_1_15:83207600-83207885:-|nuORF', 'ENST00000560639.1_1_15:83207600-83209179:-|nuORF', 'ENST00000423610.1_1_22:32435574-32435880:+|nuORF'] 58419 8908 LEVTNNLEHKS True H1975_Epitope_Rep3 1282.6517293543 1282.65062993586 39.264 2 -0.33787827869777953 0.08690952904071725 0.9438714419765777 ['ENSG00000168795|ENST00000307750|ZBTB5'] 12645 7870 DLEHGVLRLK True NCI_RA007_Epitope_Rep1 1178.6771562564998 1178.67550490379 34.605 3 -0.33789895764254096 0.08690952904071725 0.9438714419765777 ['nc|ENSG00000053702|Q9BQI9-2|NRIP2', 'ENSG00000053702|ENST00000337508|NRIP2'] 19812 13592 ELTQSELVL True PC9_epitope_Rep5 1030.5546410819798 1030.55354993586 57.306 2 -0.3379769849188572 0.08694034478481955 0.9438714419765777 ['FRS3|p.P327Hfs*64|1|0.27|ENSG00000137218|chr6:41771118-41771118|G/-|frameshift_variant', 'ENSG00000137218|ENST00000373018|FRS3', 'FRS3|p.R204Qfs*11|1|0.1|ENSG00000137218|chr6:41771489-41771490|-/T|frameshift_variant', 'FRS3|p.Q135Sfs*6|1|0.17|ENSG00000137218|chr6:41772810-41772810|G/-|frameshift_variant'] 116619 19596 TYGVSFFLV True NCI_RA007_Epitope_Rep3 1031.5327834385898 1031.5316899358602 85.477 2 -0.33797740323516595 0.08694034478481955 0.9438714419765777 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 111733 15681 TLQDQLNSL True PC9_epitope_Rep5 1030.5294889632999 1030.52838993586 65.328 2 -0.3379943285095998 0.08694034478481955 0.9438714419765777 ['ENSG00000242950|ENST00000603053|ERVW-1'] 80206 20063 PLAIFALL True H1975_Epitope_Rep3 856.5422259234799 856.54112993586 83.963 2 -0.33803660182346595 0.08697423904184827 0.9438714419765777 ['ENSG00000182327|ENST00000331264|GLTPD2'] 27012 17327 FLLLFRCQQLK True NCI_RA007_Epitope_Rep1 1407.80606225107 1407.80496993586 71.53 2 -0.3380531509048484 0.08700813209786865 0.9438714419765777 ['nc|ENSG00000104327|P05937-2|CALB1', 'CALB1|p.D199Ifs*8|1|0.19|ENSG00000104327|chr8:90063105-90063105|C/-|frameshift_variant', 'ENSG00000104327|ENST00000265431|CALB1'] 5241 12016 ALQHRPRLPR True NCI_RA007_Epitope_Rep3 1242.7421565548998 1242.74050490379 54.391 3 -0.33809069184221774 0.08701968217974383 0.9438714419765777 ['ENST00000323927.2_1_9:140077681-140079444:-|nuORF'] 63247 5927 LPAGPKVN True H1975_Epitope_Rep3 794.4650382319401 794.46394993586 27.808 2 -0.3380917513706272 0.08701968217974383 0.9438714419765777 ['ENSG00000125498|ENST00000336077|KIR2DL1', 'nc|ENSG00000125498|P43626-2|KIR2DL1'] 83329 20862 QALSPLLSV True PC9_epitope_Rep4 926.5436824754601 926.5431349679301 88.399 1 -0.3381270755098085 0.08701968217974383 0.9438714419765777 ['nc|ENSG00000204179|Q4JDL3-15|PTPN20', 'nc|ENSG00000204179|Q4JDL3-13|PTPN20'] 128002 20824 VRQLRLHHRRG True NCI_RA007_Epitope_Rep1 1426.8494155880999 1426.84830993586 85.233 2 -0.338136415332827 0.08701968217974383 0.9438714419765777 ['ENST00000307161.5_1_4:187455227-187455620:-|nuORF'] 77835 8877 PAGALPAAQ True PC9_epitope_Rep2 794.42865272322 794.42754993586 39.498 2 -0.33818344480426155 0.08705048715677591 0.9438714419765777 ['ENST00000332272.8_1_16:75513067-75513235:-|nuORF'] 57991 4700 LEQTYHAK True NCI_RA007_Epitope_Rep2 988.4977949121999 988.49668993586 22.909 2 -0.3382179711776663 0.08705048715677591 0.9438714419765777 ['ENSG00000113368|ENST00000261366|LMNB1', 'ENST00000504788.5_1_5:126112928-126171953:+|nuORF', 'LMNB1|p.P510Qfs*18|1|0.23|ENSG00000113368|chr5:126826020-126826020|C/-|frameshift_variant'] 139911 6192 YVEVERRSV True H1975_Epitope_Rep2 1135.5985715826298 1135.59691490379 28.789 3 -0.33828295218741966 0.08705048715677591 0.9438714419765777 ['nc|ENSG00000120156|Q02763-3|TEK', 'nc|ENSG00000120156|Q02763-2|TEK', 'ENSG00000120156|ENST00000380036|TEK'] 44238 5803 ILSVVQEVK True NCI_RA007_Epitope_Rep2 1013.6120963884499 1013.61098993586 27.191 2 -0.338331136057732 0.08708283143201304 0.9438714419765777 ['ENST00000238497.9_1_18:61067292-61067792:-|nuORF'] 106379 6888 SVSSLCKLYFR True NCI_RA007_Epitope_Rep5 1301.6801930316099 1301.67908993586 33.175 2 -0.33835192038903567 0.08708283143201304 0.9438714419765777 ['ARHGAP33|p.G761Afs*35|1|0.13|ENSG00000004777|chr19:35787326-35787326|G/-|frameshift_variant', 'nc|ENSG00000004777|O14559-11|ARHGAP33', 'ENSG00000004777|ENST00000007510|ARHGAP33', 'nc|ENSG00000004777|O14559-10|ARHGAP33'] 119099 13959 VEIDIELAP True PC9_epitope_Rep1 997.5331773614099 997.53208993586 58.529 2 -0.3383999821609269 0.08712980019838458 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 131019 18725 VVLGLMISSL True PC9_epitope_Rep2 1030.6096538603 1030.60854993586 77.401 2 -0.3384066448125332 0.08712980019838458 0.9438714419765777 ['ENST00000581045.1_2_17:71282696-71305904:-|nuORF'] 69070 13627 LVILNCPL True PC9_epitope_Rep6 883.52011057991 883.51900993586 64.185 2 -0.33840668132903645 0.08712980019838458 0.9438714419765777 ['ENST00000372004.7_1_20:46282573-46282858:+|nuORF'] 132389 12996 VYNENLVHM True PC9_epitope_Rep4 1117.52262976105 1117.5215299358601 57.883 2 -0.3384110358907548 0.08712980019838458 0.9438714419765777 ['ENSG00000116752|ENST00000369541|BCAS2', 'ENST00000425064.1_1_1:100858662-100858893:-|nuORF'] 115508 17862 TVGLGTAAGV True PC9_epitope_Rep2 844.4654321547599 844.46432993586 74.008 2 -0.3384600911338872 0.08714596949891068 0.9438714419765777 ['ENST00000582193.5_2_17:37356602-37357495:+|nuORF', 'ENST00000579260.5_2_17:37356602-37356950:+|nuORF'] 57795 18430 LEPGEVVVP True H1975_Epitope_Rep3 937.5120479940099 937.51149496793 77.267 1 -0.3385116674667302 0.08717985050834248 0.9438714419765777 ['ENSG00000204946|ENST00000434415|ZNF783'] 89929 11619 RFVEKYTEL True PC9_epitope_Rep4 1183.62372370131 1183.62208490379 52.451 3 -0.3386040391494504 0.08722989727240524 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 137512 8980 YLQDVVERSLG True NCI_RA007_Epitope_Rep1 1277.6615657620098 1277.6604699358602 38.931 2 -0.338607644065053 0.08722989727240524 0.9438714419765777 ['ENST00000513884.1_1_5:97912076-97912961:+|nuORF'] 46373 8462 ITHYEGSTCPK True NCI_RA007_Epitope_Rep1 1234.56522284902 1234.5635849037901 36.915 3 -0.3387781278275967 0.08729919767627212 0.9438714419765777 ['ENSG00000261701|ENST00000540303|HPR', 'nc|ENSG00000261701|P00739-2|HPR'] 125025 18627 VLPDDLSGV True PC9_epitope_Rep4 913.47566248529 913.47456993586 79.726 2 -0.33878957402973453 0.08733152684058587 0.9438714419765777 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'nc|ENSG00000114353|P04899-6|GNAI2', 'ENST00000490122.5_1_3:50289817-50295119:+|nuORF', 'nc|ENSG00000114353|P04899-3|GNAI2', 'nc|ENSG00000114353|P04899-5|GNAI2', 'nc|ENSG00000114353|P04899-2|GNAI2'] 90336 16299 RIHSIVLV True PC9_epitope_Rep3 935.59163572739 935.59052993586 67.831 2 -0.3388180006542546 0.08733152684058587 0.9438714419765777 ['CON__Q3T052'] 12839 13863 DLKRCQYVT True PC9_epitope_Rep6 1124.5648289261999 1124.56372993586 65.145 2 -0.33895557654581093 0.08741388775745125 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ENST00000566146.1_1_16:30080209-30080764:+|nuORF', 'ENSG00000109107|ENST00000226253|ALDOC'] 89933 11189 RFVEKYTEL True PC9_epitope_Rep6 1183.62372370131 1183.62208490379 54.009 3 -0.3389819001952211 0.08741388775745125 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 100920 8536 SLSLTENGKEA True PC9_epitope_Rep1 1147.57208205127 1147.57098993586 37.671 2 -0.3390022491436262 0.08741388775745125 0.9438714419765777 ['nc|ENSG00000180376|A2RUB6-3|CCDC66', 'ENSG00000180376|ENST00000394672|CCDC66', 'ENST00000422788.5_1_3:56595403-56599181:+|nuORF', 'ENST00000469966.1_1_3:56592935-56598176:+|nuORF', 'ENST00000472582.5_1_3:56591255-56599181:+|nuORF', 'nc|ENSG00000180376|A2RUB6-4|CCDC66', 'nc|ENSG00000180376|A2RUB6-2|CCDC66'] 30218 7121 FYYSPSGK True H1975_Epitope_Rep3 947.4388830537498 947.43778993586 32.361 2 -0.33901975448922056 0.08741388775745125 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3'] 79957 13678 PISPDLSHTSL True PC9_epitope_Rep2 1165.59790287629 1165.5962549037902 57.902 3 -0.339064329467894 0.08744620942464007 0.9438714419765777 ['F5|p.T1329S|1|0.14|ENSG00000198734|chr1:169541105-169541105|T/A|missense_variant'] 76439 5574 NSVWYERYK True NCI_RA007_Epitope_Rep2 1243.5985715826298 1243.59746993586 26.297 2 -0.33909655678323347 0.08744620942464007 0.9438714419765777 ['ENSG00000164241|ENST00000296662|C5orf63'] 128882 15648 VSTADNIYV True PC9_epitope_Rep6 980.48147614172 980.48036993586 72.394 2 -0.33917101524451837 0.08749778643527537 0.9438714419765777 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1'] 35752 18216 GTTVPLAGV True PC9_epitope_Rep4 813.4596184983299 813.45852993586 78.136 2 -0.3391975630671732 0.08751239552344525 0.9438714419765777 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 59319 2696 LGIHEDSTNR True PC9_epitope_Rep3 1140.5523496662001 1140.5506949037901 14.831 3 -0.33919969070810596 0.08751239552344525 0.9438714419765777 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 87686 16605 QVDNNNLLL True PC9_epitope_Rep2 1041.54547338061 1041.54436993586 69.112 2 -0.3392931205664865 0.08756396862217343 0.9438714419765777 ['PZP|p.I1373Sfs*13|1|0.39|ENSG00000126838|chr12:9152829-9152829|G/-|frameshift_variant', 'ENSG00000126838|ENST00000261336|PZP', 'nc|ENSG00000126838|P20742-2|PZP'] 14612 10385 DVKTVLQNW True H1975_Epitope_Rep3 1101.58185888933 1101.5807699358602 45.002 2 -0.33935717340050636 0.08757857459052679 0.9438714419765777 ['ENSG00000138379|ENST00000260950|MSTN'] 96828 4075 SESKARELYLQ True NCI_RA007_Epitope_Rep2 1322.68302948258 1322.6813849037899 20.489 3 -0.33937781611337686 0.08757857459052679 0.9438714419765777 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000484626.1_1_6:7404210-7405259:+|nuORF'] 82374 23482 PTVFAFSP True H1975_Epitope_Rep1 864.4381547777599 864.43760496793 97.575 1 -0.339399857342186 0.08761243714144061 0.9438714419765777 ['nc|ENSG00000172728|Q6P4F1-6|FUT10', 'ENSG00000172728|ENST00000327671|FUT10', 'nc|ENSG00000172728|Q6P4F1-2|FUT10', 'ENST00000517891.1_1_8:33230097-33235056:-|nuORF', 'ENST00000519440.5_1_8:33229659-33235056:-|nuORF', 'ENST00000517942.1_1_8:33229659-33246696:-|nuORF'] 114249 10218 TRYQIPKEV True PC9_epitope_Rep3 1132.6240580544797 1132.62241490379 44.255 3 -0.33941482293702807 0.08762548911984985 0.9438714419765777 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L'] 21942 7397 ESKHQTLQGL True H1975_Epitope_Rep3 1139.5934862021898 1139.5923899358602 33.432 2 -0.3394353900663936 0.08762548911984985 0.9438714419765777 ['ENSG00000247596|ENST00000305533|TWF2'] 45655 13647 ISIPAVQKV True PC9_epitope_Rep4 953.5909670210499 953.58986993586 60.385 2 -0.33947377838764536 0.08762548911984985 0.9438714419765777 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 95226 9297 SAASEFDYLQC True H1975_Epitope_Rep1 1232.50195388612 1232.50084993586 40.669 2 -0.3395946357807908 0.08764009135815584 0.9438714419765777 ['ENST00000274496.9_1_5:143549500-143550153:-|nuORF'] 3674 3788 AGRPPPAEQTR True NCI_RA007_Epitope_Rep2 1178.6156186290998 1178.61397490379 19.374 3 -0.3395984994124809 0.08764009135815584 0.9438714419765777 ['ENST00000412483.1_1_1:234349769-234350697:-|nuORF'] 140310 15443 YYDPKHVIF True PC9_epitope_Rep5 1180.59169529704 1180.5900449037902 64.41 3 -0.33968358104019664 0.08767394922276123 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 65707 8545 LSHLTTHKII True PC9_epitope_Rep5 1161.68699266421 1161.6853349037901 37.813 3 -0.33973900432050014 0.08769010144645291 0.9438714419765777 ['ZNF98|p.K357Rfs*98|1|0.16|ENSG00000197360|chr19:22392167-22392167|A/-|frameshift_variant', 'ZNF492|p.A457Vfs*13|1|0.19|ENSG00000229676|chr19:22665039-22665039|C/-|frameshift_variant', 'ENSG00000229676|ENST00000456783|ZNF492', 'ENSG00000197360|ENST00000357774|ZNF98'] 29462 6094 FVIATSTK True NCI_RA007_Epitope_Rep3 865.49091862661 865.48982993586 30.957 2 -0.3399304846874063 0.08779166519137485 0.9438714419765777 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF'] 43029 8404 IGGIGTVPVGR True H1975_Epitope_Rep1 1024.6029286870798 1024.60237496793 37.254 1 -0.33995302970409513 0.08779166519137485 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF'] 86076 12685 QPNSGLLQA True PC9_epitope_Rep1 926.4821448480599 926.48104993586 53.664 2 -0.3399581475552308 0.08779166519137485 0.9438714419765777 ['ENST00000491976.1_1_1:31888748-31907043:+|nuORF', 'ENSG00000168528|ENST00000373709|SERINC2', 'nc|ENSG00000168528|Q96SA4-3|SERINC2', 'nc|ENSG00000168528|Q96SA4-2|SERINC2', 'nc|ENSG00000168528|Q96SA4-4|SERINC2'] 25289 6790 FEEAAGAAP True H1975_Epitope_Rep3 861.3868474808897 861.38574993586 31.073 2 -0.3399828865958373 0.08780625973658122 0.9438714419765777 ['ENSG00000106638|ENST00000305632|TBL2', 'ENST00000488915.1_1_7:72984839-72985682:-|nuORF', 'TBL2|p.G324V|2|0.18|ENSG00000106638|chr7:73570880-73570880|C/A|missense_variant'] 69904 7269 LYDEDILER True NCI_RA007_Epitope_Rep2 1164.5662683948399 1164.56516993586 32.895 2 -0.33998614472518646 0.08780625973658122 0.9438714419765777 ['nc|ENSG00000116580|Q3T8J9-3|GON4L', 'ENSG00000116580|ENST00000368331|GON4L'] 59569 13829 LGRLTPEI True PC9_epitope_Rep6 897.5283667644899 897.52726993586 64.999 2 -0.34005097496783315 0.08782085324836254 0.9438714419765777 ['ENST00000451057.1_1_7:156990296-156991186:-|nuORF'] 14417 14555 DTIDIVRDAV True NCI_RA007_Epitope_Rep2 1115.58225281215 1115.5811499358601 61.279 2 -0.3401151201093464 0.08782085324836254 0.9438714419765777 ['ENSG00000110697|ENST00000356404|PITPNM1', 'nc|ENSG00000110697|O00562-2|PITPNM1'] 78055 5590 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 26.505 2 -0.3402540204358704 0.08788699484891933 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 64767 12408 LRRWKFRAMRK True NCI_RA007_Epitope_Rep1 1546.91432434378 1546.9126649037903 52.239 3 -0.3402735406034703 0.08788699484891933 0.9438714419765777 ['ENST00000530606.1_1_10:77055306-77055468:+|nuORF'] 59164 21643 LGFALPLGV True PC9_epitope_Rep1 885.5323895157699 885.53128993586 88.078 2 -0.3403489837573528 0.08788699484891933 0.9438714419765777 ['ENSG00000184451|ENST00000332438|CCR10'] 57712 4920 LENHDLQQRVE True NCI_RA007_Epitope_Rep2 1379.67934108447 1379.67769490379 23.757 3 -0.3403829683223651 0.08789224969469567 0.9438714419765777 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 89468 4946 REQERAYIV True H1975_Epitope_Rep2 1162.6094706195 1162.60783490379 24.107 3 -0.34042788568431387 0.08789224969469567 0.9438714419765777 ['nc|ENSG00000168066|Q15637-7|SF1', 'ENSG00000168066|ENST00000377390|SF1', 'nc|ENSG00000168066|Q15637-2|SF1', 'nc|ENSG00000168066|Q15637-4|SF1', 'nc|ENSG00000168066|Q15637-6|SF1', 'nc|ENSG00000168066|Q15637-3|SF1', 'nc|ENSG00000168066|Q15637-5|SF1', 'ENST00000482693.1_1_11:64540804-64545891:-|nuORF'] 19900 13910 ELWQEEEQKRR True PC9_epitope_Rep3 1529.7586540343298 1529.7570149037902 58.586 3 -0.34043810205498926 0.08789224969469567 0.9438714419765777 ['ENSG00000159450|ENST00000614923|TCHH'] 100286 13329 SLLSRTQVP True PC9_epitope_Rep1 999.5712942056299 999.57018993586 56.129 2 -0.3404482367041697 0.08789224969469567 0.9438714419765777 ['ENSG00000138658|ENST00000505019|ZGRF1', 'ENST00000473015.5_1_4:113483525-113509083:-|nuORF'] 31022 6662 GAVGAGEFVSP True H1975_Epitope_Rep3 989.4818104948899 989.48070993586 30.577 2 -0.34046722775714744 0.08789224969469567 0.9438714419765777 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000411772.5_2_15:43699583-43738985:-|nuORF'] 46429 23531 ITLHERLRGL True PC9_epitope_Rep1 1206.71968977482 1206.7180349037899 95.301 3 -0.3404835617540488 0.08789224969469567 0.9438714419765777 ['ENSG00000188263|ENST00000695950|IL17REL', 'nc|ENSG00000188263|Q6ZVW7-2|IL17REL'] 66384 11485 LSRDAYEIR True PC9_epitope_Rep2 1121.5829215184901 1121.58182993586 49.496 2 -0.34050274604513586 0.08789224969469567 0.9438714419765777 ['nc|ENSG00000131779|O96011-2|PEX11B', 'ENSG00000131779|ENST00000369306|PEX11B'] 125125 12935 VLPNRPFGLF True NCI_RA007_Epitope_Rep1 1158.6549642599398 1158.65386993586 54.304 2 -0.34050294224901406 0.08789224969469567 0.9438714419765777 ['ENSG00000005187|ENST00000289416|ACSM3'] 71035 4132 MESRPPPPP True H1975_Epitope_Rep2 1006.4906013567798 1006.48950993586 20.987 2 -0.3405284118405592 0.08790683680512539 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 54838 10136 LAGAGALG True PC9_epitope_Rep3 628.3544251538 628.3538749679301 43.939 1 -0.3405545818073507 0.08790683680512539 0.9438714419765777 ['ENST00000479126.1_1_3:48481673-48481955:+|nuORF'] 111529 13026 TLLRRYNIP True H1975_Epitope_Rep1 1144.67167695324 1144.6705699358602 55.187 2 -0.34057308384462137 0.08792142288293071 0.9438714419765777 ['ENSG00000102119|ENST00000369842|EMD', 'ENST00000485261.1_1_X:153607844-153608453:+|nuORF', 'ENST00000486738.5_1_X:153607844-153608453:+|nuORF'] 135964 20566 YFCYYYFLCP True PC9_epitope_Rep2 1380.5559040352798 1380.55480993586 84.542 2 -0.34057915806908773 0.08792142288293071 0.9438714419765777 ['ENSG00000204520|ENST00000449934|MICA'] 111343 14658 TLIEGTSLTF True PC9_epitope_Rep6 1080.57029114612 1080.56918993586 68.306 2 -0.3406246532333196 0.087931339585914 0.9438714419765777 ['ENSG00000153294|ENST00000283303|ADGRF4'] 111670 20191 TLPDLVPQL True PC9_epitope_Rep6 994.5698972232999 994.56880993586 90.337 2 -0.3406371822611091 0.087931339585914 0.9438714419765777 ['ENSG00000163811|ENST00000407426|WDR43'] 68601 18263 LTYQFDSAL True PC9_epitope_Rep1 1056.51277627 1056.51166993586 75.039 2 -0.34070191354316565 0.087931339585914 0.9438714419765777 ['nc|ENSG00000269404|Q01892-3|SPIB', 'ENSG00000269404|ENST00000595883|SPIB'] 58251 8669 LETAAPAPRPY True PC9_epitope_Rep2 1184.61897267404 1184.6178699358602 38.71 2 -0.340701927586259 0.087931339585914 0.9438714419765777 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 90284 7475 RHRSWWRERWP True H1975_Epitope_Rep3 1650.83924482722 1650.8381499358602 33.731 2 -0.34072354569252344 0.087931339585914 0.9438714419765777 ['ENSG00000101198|ENST00000370316|NKAIN4', 'ENST00000466885.5_1_20:61872851-61879872:-|nuORF'] 61812 8365 LLKSWSWTL True NCI_RA007_Epitope_Rep3 1132.62808080576 1132.6269899358601 40.006 2 -0.34076551499029556 0.08798287059156625 0.9438714419765777 ['ENST00000539653.5_1_12:65932484-65963821:-|nuORF'] 72654 7068 MWRDDREQFYK True NCI_RA007_Epitope_Rep2 1572.7143466942 1572.7126949037902 32.117 3 -0.3408309964578402 0.08799900906002266 0.9438714419765777 ['ENST00000477954.5_1_21:46191294-46194726:-|nuORF', 'ENST00000481546.1_1_21:46191294-46193735:-|nuORF', 'ENST00000491513.5_1_21:46191294-46199096:-|nuORF', 'nc|ENSG00000184787|P60604-2|UBE2G2', 'ENST00000497630.5_1_21:46191294-46221727:-|nuORF', 'ENSG00000184787|ENST00000345496|UBE2G2'] 70193 21332 LYLPFSLTF True NCI_RA007_Epitope_Rep4 1099.59538369515 1099.5942899358602 92.469 2 -0.34090983878965153 0.08801514695733725 0.9438714419765777 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 135013 10060 YAGSGNVL True PC9_epitope_Rep4 779.38136817763 779.38026993586 46.364 2 -0.34099670479422334 0.08806667374455887 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 75283 8280 NPRRWWRWCWQ True NCI_RA007_Epitope_Rep5 1672.7946031339197 1672.7935099358601 38.528 2 -0.3410320089774328 0.08809738662703258 0.9438714419765777 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 51970 8003 KKYADLVSI True NCI_RA007_Epitope_Rep4 1035.59644632431 1035.5953499358602 37.551 2 -0.3410360266568759 0.08809738662703258 0.9438714419765777 ['ENST00000538014.2_1_Y:21751423-21751552:+|nuORF'] 1743 4714 AEGTPDQCLP True H1975_Epitope_Rep2 1029.44371073401 1029.4426099358602 23.223 2 -0.34110438263676474 0.08809738662703258 0.9438714419765777 ['ENST00000595601.1_1_19:17651040-17654446:+|nuORF'] 36700 8040 GVMHFFLVLK True NCI_RA007_Epitope_Rep3 1189.6681717959298 1189.6665149037901 38.714 3 -0.34115439503786005 0.08811352135602817 0.9438714419765777 ['ENST00000356628.3_1_9:140195350-140195905:-|nuORF'] 65790 5293 LSISGGSAVV True H1975_Epitope_Rep2 888.4916469026 888.49054993586 25.415 2 -0.34118128880376447 0.08812965551407491 0.9438714419765777 ['ENSG00000161509|ENST00000293190|GRIN2C'] 60213 20669 LICSCFYPEP True PC9_epitope_Rep3 1170.5089538428601 1170.5078499358601 84.776 2 -0.341219992448124 0.08814578910120312 0.9438714419765777 ['ENSG00000104435|ENST00000220876|STMN2', 'nc|ENSG00000104435|Q93045-2|STMN2'] 18571 14984 EKYEQVIF True NCI_RA007_Epitope_Rep3 1054.5335117145798 1054.5324099358602 66.383 2 -0.3412306029900288 0.08814944541739637 0.9438714419765777 ['ENST00000559735.1_1_19:19681361-19681643:-|nuORF'] 30315 14735 GADFSRRRG True PC9_epitope_Rep6 1020.5213243214398 1020.52022993586 68.627 2 -0.3412366051926799 0.08814944541739637 0.9438714419765777 ['ENST00000374694.2_1_10:35930658-35931186:-|nuORF'] 105687 9498 SVGREVCI True PC9_epitope_Rep1 861.4378375079299 861.43674993586 41.39 2 -0.34123668515457856 0.08814944541739637 0.9438714419765777 ['ENST00000251691.4_1_6:138483291-138531090:+|nuORF'] 64878 7968 LSAREGSAERR True NCI_RA007_Epitope_Rep5 1230.6428960060998 1230.64178993586 37.337 2 -0.3412388089762991 0.08814944541739637 0.9438714419765777 ['ENST00000460667.5_1_10:111985902-112004616:+|nuORF'] 54896 13962 LAGPAELL True H1975_Epitope_Rep2 782.4538048418999 782.4532549679301 58.852 1 -0.3412430230962274 0.08814944541739637 0.9438714419765777 ['ENST00000488164.5_1_9:74979077-74979152:-|nuORF'] 127744 25796 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 109.27 2 -0.34129720900419525 0.08814944541739637 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 43177 13924 IGSISSVLY True H1975_Epitope_Rep2 937.5120479940099 937.51149496793 58.706 1 -0.3413780668750838 0.08814944541739637 0.9438714419765777 ['ENSG00000040487|ENST00000375153|SLC66A1', 'nc|ENSG00000040487|Q6ZP29-2|SLC66A1', 'nc|ENSG00000040487|Q6ZP29-3|SLC66A1'] 27025 14333 FLLPRLDTSNE True PC9_epitope_Rep1 1303.67721582615 1303.67610993586 59.956 2 -0.34141267037557804 0.08814944541739637 0.9438714419765777 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1', 'ENST00000527071.1_1_8:145254030-145268916:+|nuORF', 'nc|ENSG00000179832|Q8NDA8-6|MROH1', 'nc|ENSG00000179832|Q8NDA8-4|MROH1'] 107817 11062 TAQDEVYLH True NCI_RA007_Epitope_Rep5 1074.4981888350198 1074.49708993586 49.185 2 -0.3414286626390938 0.08814944541739637 0.9438714419765777 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.V2037Lfs*29|1|0.2|ENSG00000196569|chr6:129440839-129440839|G/-|frameshift_variant', 'LAMA2|p.R1029Hfs*46|1|0.17|ENSG00000196569|chr6:129300784-129300784|G/-|frameshift_variant'] 71411 16028 MILHRARTKTW True PC9_epitope_Rep1 1411.78705814199 1411.78540490379 66.464 3 -0.3414829481844269 0.08816557580045993 0.9438714419765777 ['nc|ENSG00000180481|Q4G1C9-6|GLIPR1L2'] 77523 6692 NYQKRFQNL True PC9_epitope_Rep4 1209.6254550368096 1209.62380490379 32.924 3 -0.34149433704673776 0.08818014575815468 0.9438714419765777 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 12695 18085 DLFGVKGG True PC9_epitope_Rep3 791.4177536863499 791.41664993586 74.762 2 -0.3415021262391737 0.08818014575815468 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 5692 11316 APAPPVYEA True PC9_epitope_Rep4 913.4545331178899 913.45342993586 51.305 2 -0.34158456199543413 0.08819471468496834 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'SIN3A|p.P268Hfs*19|1|0.34|ENSG00000169375|chr15:75411697-75411697|G/-|frameshift_variant', 'ENST00000568919.1_1_15:75722503-75722716:-|nuORF'] 37502 12916 GYGGGFGNF True NCI_RA007_Epitope_Rep3 874.36096708622 874.35986993586 58.07 2 -0.3416143450852899 0.08819471468496834 0.9438714419765777 ['ENST00000481161.5_1_2:163200677-163213018:+|nuORF', 'ENST00000479199.1_1_2:163200728-163213435:+|nuORF', 'ENSG00000115271|ENST00000437150|GCA', 'ENST00000487445.6_1_2:163200677-163215720:+|nuORF'] 79595 17369 PGVNQPFLI True PC9_epitope_Rep1 983.5440168286299 983.54290993586 71.619 2 -0.3416827650312136 0.08820772237649681 0.9438714419765777 ['ENSG00000171408|ENST00000308191|PDE7B', 'nc|ENSG00000205268|Q13946-2|PDE7A', 'nc|ENSG00000205268|Q13946-3|PDE7A', 'ENSG00000205268|ENST00000401827|PDE7A'] 116264 7174 TVVELTGR True NCI_RA007_Epitope_Rep4 873.4919812557699 873.49088993586 34.218 2 -0.34172279669364375 0.08820772237649681 0.9438714419765777 ['ENSG00000175899|ENST00000318602|A2M'] 54561 19147 LAASDTCFYI True PC9_epitope_Rep1 1102.50049733414 1102.49940993586 78.441 2 -0.3417280112008553 0.08820772237649681 0.9438714419765777 ['nc|ENSG00000107147|Q5JUK3|KCNT1', 'nc|ENSG00000107147|Q5JUK3-4|KCNT1', 'ENSG00000107147|ENST00000371757|KCNT1', 'nc|ENSG00000107147|Q5JUK3-2|KCNT1'] 129567 7210 VTGIAGLSAGV True NCI_RA007_Epitope_Rep5 943.53384606775 943.53274993586 34.411 2 -0.3417875783056407 0.08822228903942411 0.9438714419765777 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 112874 10284 TPPGPLASA True PC9_epitope_Rep4 809.42831837005 809.4272299358599 47.243 2 -0.3418217696080467 0.08822228903942411 0.9438714419765777 ['ENSG00000124875|ENST00000226317|CXCL6'] 98246 8956 SIERKSDGP True H1975_Epitope_Rep2 987.4985231881899 987.4974299358599 39.403 2 -0.3418559290868804 0.08823841528121684 0.9438714419765777 ['ENSG00000107036|ENST00000414202|RIC1', 'nc|ENSG00000107036|Q4ADV7-2|RIC1', 'nc|ENSG00000107036|Q4ADV7-3|RIC1'] 92819 6856 RRLKHKRKK True PC9_epitope_Rep5 1248.83672564608 1248.8356299358602 31.341 2 -0.34191627949302794 0.08826598284552127 0.9438714419765777 ['ENST00000451383.1_1_2:67108241-67108316:-|nuORF'] 63905 20542 LPVSPSLLPV True PC9_epitope_Rep5 1020.62193279616 1020.62082993586 84.059 2 -0.3420286066288324 0.08826598284552127 0.9438714419765777 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 14635 8557 DVLYPYFMVQK True NCI_RA007_Epitope_Rep1 1401.70025976985 1401.69862490379 37.288 3 -0.3420496683116088 0.08826598284552127 0.9438714419765777 ['ENSG00000105135|ENST00000263383|ILVBL', 'ENST00000533086.5_1_19:15228578-15234387:-|nuORF'] 105830 17357 SVIPVINKI True PC9_epitope_Rep4 981.62226714933 981.6211699358599 74.767 2 -0.34205134534979353 0.08826598284552127 0.9438714419765777 ['ENST00000506793.5_1_4:44680541-44700695:+|nuORF', 'GUF1|p.K645Sfs*2|1|0.17|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant', 'ENSG00000151806|ENST00000281543|GUF1'] 527 6711 AAPSRCYLR True NCI_RA007_Epitope_Rep3 1035.52838384783 1035.5272899358602 33.483 2 -0.34205634406313623 0.08826598284552127 0.9438714419765777 ['ENST00000519994.5_1_14:91633683-91655281:+|nuORF'] 23040 10904 EVKMWRNCL True PC9_epitope_Rep3 1177.57361978809 1177.57198490379 46.924 3 -0.34207635266689507 0.08827898422579047 0.9438714419765777 ['ENST00000503808.5_1_4:57204874-57250274:-|nuORF'] 118271 3977 VCRKCGRG True PC9_epitope_Rep3 877.4374606684498 877.43636993586 20.406 2 -0.3420793684699312 0.08827898422579047 0.9438714419765777 ['PRDM9|p.E612K|1|0.22|ENSG00000164256|chr5:23526922-23526922|G/A|missense_variant'] 115751 23256 TVLPGILIE True PC9_epitope_Rep5 953.57973363101 953.57918496793 94.44 1 -0.34208513339317864 0.08827898422579047 0.9438714419765777 ['ENSG00000125863|ENST00000347364|MKKS'] 92992 8923 RRQWRRRRRPQ True NCI_RA007_Epitope_Rep2 1649.9675736581698 1649.96646993586 39.332 2 -0.3421125434691379 0.08829042297354647 0.9438714419765777 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 47637 18338 IYPPINVLPSL True NCI_RA007_Epitope_Rep3 1224.71181042972 1224.7107099358602 80.309 2 -0.34213739692978384 0.08829042297354647 0.9438714419765777 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 12092 22313 DIFGCVADIGW True PC9_epitope_Rep5 1194.5379454720198 1194.5368499358601 90.834 2 -0.3421476959176337 0.08829042297354647 0.9438714419765777 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 49502 4008 KKAYYLTQKIP True H1975_Epitope_Rep3 1351.7863723523096 1351.78471490379 20.542 3 -0.3421552476529277 0.08829042297354647 0.9438714419765777 ['ENSG00000135912|ENST00000392102|TTLL4', 'ENST00000465558.5_1_2:219612840-219617731:+|nuORF'] 140432 19959 YYFEGIKQTF True PC9_epitope_Rep5 1294.6233893481397 1294.6228749679299 81.825 1 -0.34223706872540716 0.08830498284825122 0.9438714419765777 ['ENSG00000100591|ENST00000216479|AHSA1', 'ENST00000556369.1_3_14:77935388-77935589:+|nuORF'] 16112 5743 EEEDNGELRER True H1975_Epitope_Rep1 1374.60115033342 1374.6000499358602 27.159 2 -0.3422373903150564 0.08830498284825122 0.9438714419765777 ['ENSG00000186862|ENST00000619208|PDZD7'] 27022 9340 FLLPRLDTSNE True H1975_Epitope_Rep1 1303.67721582615 1303.67610993586 40.834 2 -0.3423909292678756 0.08840951286358412 0.9438714419765777 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1', 'ENST00000527071.1_1_8:145254030-145268916:+|nuORF', 'nc|ENSG00000179832|Q8NDA8-6|MROH1', 'nc|ENSG00000179832|Q8NDA8-4|MROH1'] 90370 18419 RIKDEFQLL True PC9_epitope_Rep1 1160.6553581827598 1160.6537249037901 75.639 3 -0.3424652355199298 0.08842563123276045 0.9438714419765777 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000586003.1_1_19:3061156-3062198:-|nuORF', 'ENST00000585782.1_1_19:3057505-3062198:-|nuORF'] 77811 17362 PAEPAFLA True PC9_epitope_Rep6 814.4225047136199 814.42140993586 79.398 2 -0.342485955771879 0.08844174903195007 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 29819 10831 FVVDRNTISYY True H1975_Epitope_Rep2 1375.6772158261501 1375.67557490379 46.691 3 -0.34250848814214496 0.08845786626118321 0.9438714419765777 ['ENSG00000181752|ENST00000313447|OR8K5'] 86078 12488 QPNSGLLQA True PC9_epitope_Rep5 926.4821448480599 926.48104993586 53.034 2 -0.34272653644893014 0.08856238618080235 0.9438714419765777 ['ENST00000491976.1_1_1:31888748-31907043:+|nuORF', 'ENSG00000168528|ENST00000373709|SERINC2', 'nc|ENSG00000168528|Q96SA4-3|SERINC2', 'nc|ENSG00000168528|Q96SA4-2|SERINC2', 'nc|ENSG00000168528|Q96SA4-4|SERINC2'] 6457 16301 APSRVLVIP True PC9_epitope_Rep5 950.5913013742198 950.59020993586 67.696 2 -0.34274111167927435 0.08857850070721358 0.9438714419765777 ['ENSG00000137414|ENST00000259963|FAM8A1'] 14539 7862 DVDGYCYNGIC True H1975_Epitope_Rep1 1220.4478101382801 1220.44670993586 35.194 2 -0.34287803381006465 0.08864765474443521 0.9438714419765777 ['nc|ENSG00000148848|O43184-3|ADAM12', 'nc|ENSG00000148848|O43184-4|ADAM12', 'nc|ENSG00000148848|O43184-2|ADAM12', 'ENSG00000148848|ENST00000448723|ADAM12', 'nc|ENSG00000148848|O43184|ADAM12'] 81472 18765 PQPDVFPLF True NCI_RA007_Epitope_Rep3 1058.54368247546 1058.5425899358602 82.059 2 -0.3429913530665564 0.08868144690781797 0.9438714419765777 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 81337 5823 PPRPPPPPP True PC9_epitope_Rep5 950.5337864980999 950.53268993586 27.391 2 -0.3430378456378388 0.08869599038257549 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 67763 15777 LTGTWTSV True PC9_epitope_Rep5 863.43888305375 863.43778993586 65.679 2 -0.343101221049836 0.08869599038257549 0.9438714419765777 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000466300.1_1_1:898262-899729:+|nuORF'] 55403 8025 LASVRRVF True NCI_RA007_Epitope_Rep5 946.5712346359799 946.57012993586 37.558 2 -0.34312603762796223 0.0887073964078631 0.9438714419765777 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000542958.5_1_12:64816967-64819028:+|nuORF', 'ENST00000443317.1_1_20:32802260-32803361:-|nuORF'] 115484 5455 TVGATALPR True H1975_Epitope_Rep3 884.50796567308 884.50686993586 26.038 2 -0.34314161451916464 0.0887073964078631 0.9438714419765777 ['nc|ENSG00000156261|P50990-2|CCT8', 'ENSG00000156261|ENST00000286788|CCT8', 'nc|ENSG00000156261|P50990-3|CCT8', 'ENST00000475205.1_1_21:30434643-30435788:-|nuORF'] 92575 1643 RRCHMVERLC True H1975_Epitope_Rep1 1301.6267350734497 1301.6250749037902 8.5385 3 -0.34315000736910256 0.0887073964078631 0.9438714419765777 ['ENSG00000105708|ENST00000344099|ZNF14'] 85877 14586 QNILEPFYVL True PC9_epitope_Rep5 1234.65977485686 1234.6586699358602 61.106 2 -0.3432053176825859 0.0887073964078631 0.9438714419765777 ['EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion', 'nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 7451 11583 ASDLNLLT True NCI_RA007_Epitope_Rep4 845.4494477374501 845.4488949679301 51.501 1 -0.34323976368772147 0.08872350580706748 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'nc|ENSG00000196730|P53355-4|DAPK1'] 62028 24668 LLLVLLLLLED True PC9_epitope_Rep6 1265.82102652553 1265.81938490379 109.39 3 -0.34329334630538677 0.08873804599529794 0.9438714419765777 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2'] 47869 10318 IYTNLNQKI True PC9_epitope_Rep6 1105.61315901761 1105.61206993586 50.386 2 -0.34329440777427095 0.08873804599529794 0.9438714419765777 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 7126 8316 AQYEEMAKC True PC9_epitope_Rep3 1071.4365171785898 1071.4354099358602 36.959 2 -0.3433390016535264 0.08877183058756982 0.9438714419765777 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 13493 16384 DPEIITLERR True PC9_epitope_Rep1 1240.67755017932 1240.67644993586 67.843 2 -0.3433431551306954 0.08878009120152709 0.9438714419765777 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-3|DNAJC10'] 124178 10447 VLADIAKQV True PC9_epitope_Rep2 955.5702315764698 955.56912993586 45.504 2 -0.3433515979738074 0.08878009120152709 0.9438714419765777 ['ENSG00000174720|ENST00000344442|LARP7', 'nc|ENSG00000174720|Q4G0J3-3|LARP7'] 107289 12040 SYQQPLSI True NCI_RA007_Epitope_Rep3 934.4759968384599 934.47488993586 54.484 2 -0.34335336213088685 0.08878009120152709 0.9438714419765777 ['nc|ENSG00000183307|Q9BXQ6-2|TMEM121B', 'ENSG00000183307|ENST00000331437|TMEM121B'] 112883 11419 TPPPGLASA True PC9_epitope_Rep3 809.42831837005 809.4272299358599 48.924 2 -0.34335797852038386 0.08878009120152709 0.9438714419765777 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 95274 12278 SADRGLVL True PC9_epitope_Rep5 829.46576650793 829.46466993586 52.216 2 -0.34336105222199426 0.08878009120152709 0.9438714419765777 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-7|FCAR'] 38898 4858 HIKENVATLV True PC9_epitope_Rep3 1122.6397081186199 1122.63805490379 23.784 3 -0.343377721501765 0.08878009120152709 0.9438714419765777 ['ENST00000444644.1_1_1:79215537-79215930:+|nuORF'] 99067 8446 SKYLIYRRYRQ True PC9_epitope_Rep2 1544.85758022996 1544.85648993586 37.856 2 -0.34349421825316623 0.08886689407730783 0.9438714419765777 ['ENSG00000100365|ENST00000248899|NCF4', 'nc|ENSG00000100365|Q15080-3|NCF4'] 25088 14146 FDIAEGVRTVL True NCI_RA007_Epitope_Rep1 1218.66083748602 1218.6597499358602 59.058 2 -0.3435298911632327 0.08891520271464423 0.9438714419765777 ['ENSG00000111335|ENST00000392583|OAS2', 'nc|ENSG00000111335|P29728|OAS2'] 33411 22138 GLFTFLEAI True NCI_RA007_Epitope_Rep2 1009.5484335027298 1009.54787496793 91.884 1 -0.3435516849965078 0.08891520271464423 0.9438714419765777 ['ENST00000375906.5_1_6:31629762-31629897:-|nuORF'] 72768 8571 NAEIEPDDY True H1975_Epitope_Rep3 1064.42983449168 1064.42872993586 37.959 2 -0.34369604817471255 0.08891520271464423 0.9438714419765777 ['nc|ENSG00000157036|Q9Y2C4-3|EXOG', 'nc|ENSG00000157036|Q9Y2C4-4|EXOG', 'ENSG00000157036|ENST00000287675|EXOG'] 33165 12107 GKSLFSQSL True PC9_epitope_Rep3 965.51819600361 965.51708993586 51.612 2 -0.3437484266286043 0.08892816117345587 0.9438714419765777 ['ENST00000494985.5_1_13:113863983-113873323:+|nuORF'] 56995 10513 LEEEEEEDP True PC9_epitope_Rep1 1117.4298940613298 1117.42878993586 45.328 2 -0.34376368041959976 0.08892816117345587 0.9438714419765777 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 99522 9534 SLETDFWAV True PC9_epitope_Rep1 1066.49712620586 1066.4960299358602 41.53 2 -0.34379077000658986 0.08892816117345587 0.9438714419765777 ['nc|ENSG00000242485|Q9BYC9-2|MRPL20'] 58485 17272 LEYNSWHVL True PC9_epitope_Rep1 1159.56620882519 1159.5645749037901 71.255 3 -0.3438764813309691 0.08896036192058246 0.9438714419765777 ['ENST00000422884.1_1_10:75491660-75492464:+|nuORF'] 48309 16313 KDPFQNIIV True PC9_epitope_Rep1 1072.59169529704 1072.5905899358602 67.566 2 -0.34389566550386197 0.08896036192058246 0.9438714419765777 ['Tigger1_dup3188|chr4:76920080-76921080:-|1.2529691912903969|0.285655789289939|2.13|501.0|20|2|sense'] 138458 16561 YRFHKSRRKKK True NCI_RA007_Epitope_Rep3 1532.9164325187596 1532.9153299358602 72.933 2 -0.3439915668509464 0.08899256039159555 0.9438714419765777 ['ZNF804A|p.W589R|1|0.24|ENSG00000170396|chr2:184937161-184937161|T/C|missense_variant'] 18087 13273 EIKQEINML True PC9_epitope_Rep4 1116.58489566444 1116.58378993586 58.95 2 -0.3440017903151976 0.08899256039159555 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1', 'ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 34092 11458 GPAAVVAVE True PC9_epitope_Rep3 811.4439684341899 811.44341496793 49.07 1 -0.34404538888822295 0.08900865877363492 0.9438714419765777 ['CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 101092 4479 SLTWKRWRRCW True NCI_RA007_Epitope_Rep4 1576.8197552525999 1576.81757987172 23.607 4 -0.34406575875870155 0.08901846452866861 0.9438714419765777 ['ENST00000415950.4_2_19:35528037-35528250:+|nuORF'] 63683 15468 LPPTHHNCPL True PC9_epitope_Rep1 1127.55459859567 1127.5529549037901 64.318 3 -0.34407902124373185 0.08901846452866861 0.9438714419765777 ['ENST00000530117.5_1_1:205027631-205031234:+|nuORF'] 126547 6130 VPPFLKGVP True H1975_Epitope_Rep1 952.5745886809199 952.57348993586 28.649 2 -0.34410470472575805 0.08901846452866861 0.9438714419765777 ['ENST00000368321.7_1_1:155883759-155883837:-|nuORF'] 101036 16123 SLTLFFGTTV True PC9_epitope_Rep4 1084.580461907 1084.57936993586 69.957 2 -0.34414615845716634 0.08901846452866861 0.9438714419765777 ['DLX5|p.P218Rfs*95|1|0.33|ENSG00000105880|chr7:97020953-97020954|-/C|frameshift_variant'] 32227 8078 GFGGDDAPR True H1975_Epitope_Rep3 890.38824446322 890.38714993586 36.046 2 -0.34416281216450223 0.08901846452866861 0.9438714419765777 ['ENSG00000169067|ENST00000423391|ACTBL2'] 54535 12948 LAALEARQKA True PC9_epitope_Rep1 1069.6243924076498 1069.6232899358602 54.676 2 -0.34417306451727114 0.0890329876141845 0.9438714419765777 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8'] 24356 15464 FAEAEEMRARL True PC9_epitope_Rep6 1321.6448701520499 1321.64376993586 71.647 2 -0.3441990818475535 0.0890329876141845 0.9438714419765777 ['nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 70073 15139 LYIDWTENYKH True PC9_epitope_Rep5 1480.69867954672 1480.6975899358602 63.237 2 -0.3442770795269027 0.0890828459866782 0.9438714419765777 ['CON__Q1A7A4'] 56154 17804 LDNIELYWNSY True H1975_Epitope_Rep2 1428.6561460284 1428.65504993586 73.803 2 -0.34429928254219805 0.0890828459866782 0.9438714419765777 ['nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000556716.5_1_14:21486897-21488105:-|nuORF', 'ENST00000554277.5_1_14:21487301-21489989:-|nuORF', 'nc|ENSG00000165795|Q9UN36-5|NDRG2', 'nc|ENSG00000165795|Q9UN36-3|NDRG2', 'ENST00000557416.5_1_14:21486655-21488105:-|nuORF'] 105202 19016 STPLKLIGV True PC9_epitope_Rep1 926.5800679841799 926.57896993586 77.934 2 -0.3443242993485476 0.0891166077738516 0.9438714419765777 ['ENSG00000154319|ENST00000284486|FAM167A', 'ENST00000531564.1_1_8:11281884-11301161:-|nuORF'] 130611 17370 VVAGILVQ True PC9_epitope_Rep5 797.5010893874901 797.5005449679301 71.815 1 -0.3444319898762488 0.08915036836805003 0.9438714419765777 ['nc|ENSG00000081307|Q9GZZ9-2|UBA5', 'ENSG00000081307|ENST00000356232|UBA5'] 105409 10156 SVAEKLSKL True PC9_epitope_Rep1 973.5807962601699 973.57968993586 43.941 2 -0.34450956875265404 0.08917782567219022 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 15672 6524 EC[Carbamidomethyl]GKAFTCSSY True H1975_Epitope_Rep3 1251.49000958286 1251.4889099358602 30.061 2 -0.344514265267513 0.08917782567219022 0.9438714419765777 ['ENSG00000169981|ENST00000396056|ZNF35'] 49026 11573 KFIDTTSKF True PC9_epitope_Rep3 1085.57571087973 1085.57460993586 49.531 2 -0.344516008367854 0.08917782567219022 0.9438714419765777 ['ENSG00000140986|ENST00000268661|RPL3L', 'ENST00000473638.5_1_22:39708982-39709710:-|nuORF', 'ENSG00000100316|ENST00000216146|RPL3', 'ENST00000417615.1_1_14:99439218-99439536:-|nuORF'] 111009 9134 TLDICPNVLP True H1975_Epitope_Rep2 1083.56343194387 1083.5623299358601 40.087 2 -0.34451681170298676 0.08917782567219022 0.9438714419765777 ['ENST00000538886.5_1_17:73233291-73233537:-|nuORF'] 11530 17749 DGKLFNAI True PC9_epitope_Rep4 876.4705175351999 876.46942993586 76.295 2 -0.3445448502182908 0.08917782567219022 0.9438714419765777 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'ENST00000523967.5_1_6:56504020-56716372:-|nuORF', 'ENST00000521821.1_1_6:56535374-56707943:-|nuORF', 'ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 71225 12725 MFVFKERWFWR True NCI_RA007_Epitope_Rep1 1630.8231092975398 1630.82146490379 53.482 3 -0.34472999146559874 0.08919391594679103 0.9438714419765777 ['ENSG00000157227|ENST00000311852|MMP14'] 99501 15647 SLERKKENSLL True PC9_epitope_Rep2 1315.7459640923098 1315.7443049037902 65.461 3 -0.34480486993031356 0.08922767100056529 0.9438714419765777 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.K1222Rfs*34|1|0.12|ENSG00000104237|chr8:54627546-54627547|-/GG|frameshift_variant'] 4841 24063 ALFGALFLA True PC9_epitope_Rep1 921.5323895157699 921.53128993586 97.368 2 -0.3448501555162615 0.08924060694917949 0.9438714419765777 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP', 'nc|ENSG00000100979|P55058-3|PLTP'] 71030 4740 MESRPPPPP True H1975_Epitope_Rep1 1006.4906013567798 1006.48950993586 23.289 2 -0.34489208821205264 0.08924060694917949 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 63108 16660 LNNIADGL True PC9_epitope_Rep2 828.4341320264799 828.43302993586 69.326 2 -0.34489931677472146 0.08924060694917949 0.9438714419765777 ['ENSG00000165424|ENST00000372336|ZCCHC24', 'ENST00000372333.3_1_10:81146103-81203947:-|nuORF'] 63888 9988 LPVLYQVERTR True H1975_Epitope_Rep3 1372.7826839542 1372.7815899358602 43.455 2 -0.34499044739796203 0.08929202289267293 0.9438714419765777 ['ENSG00000101473|ENST00000217455|ACOT8', 'ENST00000484783.1_1_20:44472824-44485954:-|nuORF', 'ENST00000484975.5_1_20:44472824-44477348:-|nuORF', 'ENST00000493118.5_1_20:44472824-44485929:-|nuORF'] 111029 9045 TLDNLPESQP True H1975_Epitope_Rep3 1112.5349682665599 1112.5338699358601 39.779 2 -0.3450919131186803 0.08932261768082664 0.9438714419765777 ['NEK11|p.E436D|1|0.24|ENSG00000114670|chr3:131170796-131170796|G/T|missense_variant'] 46435 8371 ITLLEQGKEPC True NCI_RA007_Epitope_Rep2 1229.6325741328499 1229.6314699358602 37.202 2 -0.34510191316718797 0.08932261768082664 0.9438714419765777 ['ENSG00000171817|ENST00000316433|ZNF540'] 4371 4872 AIQEVEMLPRP True NCI_RA007_Epitope_Rep1 1281.6751076511698 1281.6734549037901 23.03 3 -0.34514053963755514 0.08932261768082664 0.9438714419765777 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'DMD|p.L1312Ffs*8|1|0.52|ENSG00000198947|chrX:32438376-32438377|-/A|frameshift_variant'] 83033 21002 PYLDKFFAL True PC9_epitope_Rep4 1112.59063266788 1112.5895299358601 88.946 2 -0.34529062739595173 0.0894093542461495 0.9438714419765777 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 60668 9295 LITVWEDP True H1975_Epitope_Rep3 971.4963979298699 971.49530993586 40.748 2 -0.3453556661466804 0.08942227874035218 0.9438714419765777 ['OR10G3|p.A51E|1|0.36|ENSG00000169208|chr14:21570593-21570593|G/T|missense_variant'] 24239 9287 EYWDRQRNRHR True NCI_RA007_Epitope_Rep2 1614.7876031771798 1614.78595490379 40.734 3 -0.34537193133124044 0.08942227874035218 0.9438714419765777 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6'] 43152 13592 IGRFLPASP True PC9_epitope_Rep2 956.5443511817998 956.54324993586 57.571 2 -0.3453754538253822 0.08942227874035218 0.9438714419765777 ['ENSG00000146263|ENST00000683635|MMS22L'] 105353 15930 STWTAACQDT True H1975_Epitope_Rep2 1082.4338743262997 1082.43276993586 66.474 2 -0.3454531843370183 0.08948502401808421 0.9438714419765777 ['ENST00000433250.2_1_9:32566378-32566630:-|nuORF'] 15752 7251 EDEEEEGDP True H1975_Epitope_Rep2 1047.35164374063 1047.35054993586 32.825 2 -0.34552322425690124 0.08948502401808421 0.9438714419765777 ['ENSG00000130037|ENST00000252321|KCNA5', 'KCNA5|p.F196Lfs*162|1|0.37|ENSG00000130037|chr12:5044735-5044735|C/-|frameshift_variant', 'KCNA5|p.L396Wfs*36|1|0.12|ENSG00000130037|chr12:5045331-5045331|C/-|frameshift_variant'] 83149 6145 PYSDSTAKL True PC9_epitope_Rep4 980.48147614172 980.48036993586 30.655 2 -0.34552438973568667 0.08948502401808421 0.9438714419765777 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000601501.5_1_19:50354350-50358367:+|nuORF', 'ENST00000598632.5_1_19:50354098-50358367:+|nuORF', 'ENST00000602040.5_1_19:50354666-50357992:+|nuORF', 'PTOV1|p.M142Hfs*58|2|0.28|ENSG00000104960|chr19:49854860-49854861|-/A|frameshift_variant'] 63469 13386 LPHGFTNMA True PC9_epitope_Rep1 986.4643866089401 986.46328993586 56.35 2 -0.34553593744222744 0.08948502401808421 0.9438714419765777 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 93546 4513 RSPSILAAK True NCI_RA007_Epitope_Rep4 941.5658149023699 941.56470993586 23.752 2 -0.3455668995017737 0.08948502401808421 0.9438714419765777 ['nc|ENSG00000144331|Q569K4-3|ZNF385B', 'nc|ENSG00000144331|Q569K4-2|ZNF385B', 'nc|ENSG00000144331|Q569K4|ZNF385B', 'ENSG00000144331|ENST00000410066|ZNF385B'] 37733 4757 HATLWDSVGHR True NCI_RA007_Epitope_Rep4 1277.62651766597 1277.6248649037902 24.731 3 -0.34565203219907037 0.0894947818255664 0.9438714419765777 ['EML1|p.A572S|1|0.41|ENSG00000066629|chr14:99914659-99914659|G/T|missense_variant'] 73564 5027 NFSTHQRVHT True NCI_RA007_Epitope_Rep4 1225.59521753769 1225.59358490379 25.824 3 -0.34568737276251066 0.0894947818255664 0.9438714419765777 ['nc|ENSG00000103199|O60304-2|ZNF500', 'ENSG00000103199|ENST00000219478|ZNF500'] 82563 12493 PVGQGYGL True PC9_epitope_Rep6 789.4021036222099 789.4015549679301 59.475 1 -0.345688128362013 0.0894947818255664 0.9438714419765777 ['ENSG00000123983|ENST00000357430|ACSL3'] 20002 9507 EMIQGHSPFK True PC9_epitope_Rep5 1172.5648289261997 1172.56372993586 41.526 2 -0.3457082341827535 0.0894947818255664 0.9438714419765777 ['nc|ENSG00000125388|P32298-3|GRK4', 'nc|ENSG00000125388|P32298-4|GRK4', 'nc|ENSG00000125388|P32298-2|GRK4', 'ENSG00000125388|ENST00000398052|GRK4'] 81125 2610 PPHPPPPPP True NCI_RA007_Epitope_Rep5 931.49158733295 931.49048993586 14.74 2 -0.3457122682376636 0.0894947818255664 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 46507 7183 ITPQGYSD True H1975_Epitope_Rep3 879.3974121645899 879.39630993586 32.604 2 -0.3457498080835029 0.08951085996821473 0.9438714419765777 ['ENSG00000169554|ENST00000627532|ZEB2', 'nc|ENSG00000169554|O60315-2|ZEB2'] 126275 9535 VPHLLTEA True PC9_epitope_Rep4 878.48616759934 878.48506993586 44.288 2 -0.34586740810354444 0.08959598813391723 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 33282 20525 GLASIQVVDI True PC9_epitope_Rep1 1013.57571087973 1013.5746099358599 83.761 2 -0.3459221191974803 0.08959598813391723 0.9438714419765777 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 119825 7745 VEVPAPAA True H1975_Epitope_Rep1 752.4068546494799 752.40630496793 34.75 1 -0.34603875668100004 0.08960731690091109 0.9438714419765777 ['ENST00000462672.1_1_10:131506162-131515894:+|nuORF', 'ENSG00000170430|ENST00000651593|MGMT'] 91459 4692 RNRKSWRKQGP True H1975_Epitope_Rep1 1411.79089765247 1411.78924490379 23.083 3 -0.34604780705988614 0.08960731690091109 0.9438714419765777 ['ENST00000542357.1_1_12:6747897-6752833:-|nuORF'] 30809 7382 GAPQPPPPPP True PC9_epitope_Rep4 953.4970666362099 953.49596993586 35.735 2 -0.34609199327912776 0.08960731690091109 0.9438714419765777 ['ENSG00000205922|ENST00000382349|ONECUT3', 'nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 120896 10486 VGDYSGQITL True NCI_RA007_Epitope_Rep3 1051.51858992643 1051.51748993586 48.307 2 -0.34609563331924653 0.08960731690091109 0.9438714419765777 ['ENSG00000085449|ENST00000233055|WDFY1'] 119982 18525 VFAGVFNTF True NCI_RA007_Epitope_Rep1 1000.50181766348 1000.50072993586 76.197 2 -0.34619015594778013 0.08963788202475326 0.9438714419765777 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 14141 14813 DSGYLNSQYF True H1975_Epitope_Rep3 1192.50366813828 1192.50256993586 62.359 2 -0.3462180683994244 0.08963788202475326 0.9438714419765777 ['ENST00000478277.5_1_1:161088025-161088985:+|nuORF', 'ENST00000496768.5_1_1:161087910-161088985:+|nuORF', 'ENST00000368009.6_1_1:161087910-161088985:+|nuORF', 'nc|ENSG00000158793|Q86X76-3|NIT1'] 87314 16457 QSVSQFLLS True PC9_epitope_Rep4 1007.52876068731 1007.52766993586 71.271 2 -0.34622685620842725 0.08963788202475326 0.9438714419765777 ['nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3'] 70314 23473 LYPGIVTFVI True PC9_epitope_Rep5 1120.65323292444 1120.65212993586 95.275 2 -0.34628392548802195 0.08966686086542026 0.9438714419765777 ['ENSG00000188037|ENST00000343257|CLCN1'] 39251 18900 HLLPSQTVL True PC9_epitope_Rep1 1006.5811306133401 1006.58002993586 77.483 2 -0.34632324247428553 0.08966686086542026 0.9438714419765777 ['ENST00000452761.1_1_2:110745136-110745940:-|nuORF'] 95596 11169 SATENIPPPP True H1975_Epitope_Rep1 1021.5080252427299 1021.50692993586 47.93 2 -0.3464201209576208 0.08966686086542026 0.9438714419765777 ['ENSG00000177311|ENST00000321464|ZBTB38'] 20124 11923 ENLEDEYEP True H1975_Epitope_Rep3 1136.45096385908 1136.44986993586 51.014 2 -0.3464286273816345 0.08966686086542026 0.9438714419765777 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'nc|ENSG00000146143|P49643-2|PRIM2', 'PRIM2-NKAIN2|1|fusion', 'PRIM2-NKAIN2|2|fusion'] 64952 10264 LSCLWYPSP True H1975_Epitope_Rep2 1064.50010341132 1064.4990099358602 44.486 2 -0.3464655215192114 0.08967818242801913 0.9438714419765777 ['ENST00000395884.3_1_8:103663556-103663649:-|nuORF'] 71038 4395 MESRPPPPP True H1975_Epitope_Rep2 1006.4906013567798 1006.48950993586 22.015 2 -0.34647522360131733 0.08967818242801913 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 66788 13397 LSVIDMGLSTV True PC9_epitope_Rep2 1133.60021137541 1133.59910993586 56.813 2 -0.346478237780649 0.08967818242801913 0.9438714419765777 ['ENSG00000280094|ENST00000623530|OR1B1'] 3407 5380 AGKFEDKLIQ True NCI_RA007_Epitope_Rep3 1147.6237237013097 1147.62208490379 28.169 3 -0.34649243977366756 0.08967818242801913 0.9438714419765777 ['nc|ENSG00000004139|Q6SZW1-2|SARM1', 'ENSG00000004139|ENST00000585482|SARM1', 'ENST00000379061.8_1_17:26712241-26725107:+|nuORF'] 136219 11122 YGNAAVEL True PC9_epitope_Rep4 835.40758292547 835.40648993586 50.558 2 -0.3466025538488642 0.08972797401542834 0.9438714419765777 ['ENSG00000136011|ENST00000388887|STAB2', 'STAB2|p.G1653Vfs*2|1|0.09|ENSG00000136011|chr12:103728870-103728870|G/-|frameshift_variant'] 15973 18457 EDWERTEVLH True PC9_epitope_Rep1 1312.60477916188 1312.60312490379 75.786 3 -0.3466057977018499 0.08972797401542834 0.9438714419765777 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.A2365Gfs*44|3|0.14|ENSG00000163554|chr1:158612859-158612860|-/A|frameshift_variant', 'SPTA1|p.S1181Rfs*59|1|0.24|ENSG00000163554|chr1:158649882-158649882|A/-|frameshift_variant', 'SPTA1|p.R1164Afs*76|1|0.26|ENSG00000163554|chr1:158649935-158649935|G/-|frameshift_variant', 'SPTA1|p.H1183Mfs*57|1|0.25|ENSG00000163554|chr1:158649878-158649878|G/-|frameshift_variant', 'SPTA1|p.D1665Tfs*2|1|0.27|ENSG00000163554|chr1:158638229-158638229|C/-|frameshift_variant', 'SPTA1|p.V1843Sfs*9|2|0.42|ENSG00000163554|chr1:158634582-158634582|A/-|frameshift_variant'] 35314 14056 GSTPDFTF True PC9_epitope_Rep6 870.37594844402 870.37484993586 65.939 2 -0.3466135873211315 0.08974087410859281 0.9438714419765777 ['ENSG00000175029|ENST00000309035|CTBP2', 'CTBP2|p.Y212Lfs*38|1|0.35|ENSG00000175029|chr10:124994615-124994616|-/G|frameshift_variant'] 124908 16548 VLLRMACSNI True H1975_Epitope_Rep3 1118.5940208795 1118.5929299358602 69.149 2 -0.34662029324052457 0.08974087410859281 0.9438714419765777 ['ENSG00000184166|ENST00000641833|OR1D2'] 108171 6639 TDTAPTTTAP True H1975_Epitope_Rep2 974.4556553167 974.45454993586 30.446 2 -0.3467061490712038 0.08974087410859281 0.9438714419765777 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 87484 4936 QTEVPKRGGRK True NCI_RA007_Epitope_Rep2 1254.7156670235397 1254.71401490379 23.821 3 -0.3468220502623653 0.08977300808415999 0.9438714419765777 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant', 'MKI67|p.N838Kfs*25|1|0.09|ENSG00000148773|chr10:128109326-128109327|-/T|frameshift_variant'] 100442 5442 SLPEHWNYRRE True NCI_RA007_Epitope_Rep2 1485.71130991909 1485.7096649037899 25.788 3 -0.34683828865716065 0.08977300808415999 0.9438714419765777 ['AluJo_dup31358|chr7:139036456-139036762:-|1.0349885509042276|0.2549609110980715|2.02|499.0|16|2|anti-sense'] 68573 8785 LTYEDNGY True H1975_Epitope_Rep2 973.4028914678499 973.40178993586 38.756 2 -0.34695617404838924 0.08982437560674257 0.9438714419765777 ['nc|ENSG00000215846|A8MV57|MPTX1'] 133060 11978 VYWDSAGAAHF True NCI_RA007_Epitope_Rep3 1222.5407223533396 1222.5396299358601 54.235 2 -0.3469939932379091 0.08983726922941156 0.9438714419765777 ['ENSG00000136213|ENST00000618655|CHST12'] 102365 18714 SPVLCVPGVT True PC9_epitope_Rep1 970.51575347546 970.51464993586 76.772 2 -0.34701222000422166 0.08983726922941156 0.9438714419765777 ['ENST00000485230.5_2_3:112930474-112968600:+|nuORF', 'ENST00000495514.5_2_3:112930393-112968640:+|nuORF'] 675 9128 AAVDAGMAM True NCI_RA007_Epitope_Rep3 835.35681030591 835.35570993586 42.992 2 -0.3470244660154832 0.08983726922941156 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 79602 3851 PGVYARVTRLR True NCI_RA007_Epitope_Rep2 1286.7571379126998 1286.7560499358601 19.614 2 -0.3471041170507357 0.08986622427729342 0.9438714419765777 ['ENSG00000178297|ENST00000696167|TMPRSS9', 'nc|ENSG00000178297|Q7Z410|TMPRSS9', 'ENST00000395264.3_1_19:2389783-2414036:+|nuORF'] 14474 5898 DTSVKPQAL True NCI_RA007_Epitope_Rep3 957.5131106231698 957.51200993586 30.174 2 -0.34710739121010203 0.08986622427729342 0.9438714419765777 ['ENSG00000171169|ENST00000373078|NAIF1', 'ENST00000488519.1_1_9:130825709-130828462:-|nuORF'] 14508 13472 DTYDCDEY True H1975_Epitope_Rep2 1022.31750716138 1022.31640993586 56.954 2 -0.3471149794946176 0.08986622427729342 0.9438714419765777 ['ENSG00000197961|ENST00000320451|ZNF121'] 9464 16786 AVWRKNDENI True PC9_epitope_Rep1 1243.6309343400699 1243.62982993586 69.392 2 -0.34711710107201704 0.08986622427729342 0.9438714419765777 ['TGFBR2|p.E471Gfs*41|1|0.35|ENSG00000163513|chr3:30688399-30688409|AGCCTCCATTT/-|frameshift_variant', 'ENSG00000163513|ENST00000295754|TGFBR2', 'nc|ENSG00000163513|P37173-2|TGFBR2'] 19121 11383 ELIKDAHLLVE True H1975_Epitope_Rep1 1278.71835236214 1278.71724993586 48.764 2 -0.34715803742824425 0.08989517523735574 0.9438714419765777 ['ENSG00000138095|ENST00000260665|LRPPRC'] 97386 7178 SGDFPDEGFPG True NCI_RA007_Epitope_Rep2 1123.4458189089898 1123.44472993586 32.541 2 -0.3471610072015698 0.08989517523735574 0.9438714419765777 ['ENST00000443892.2_1_1:2481410-2485587:-|nuORF'] 76537 4416 NTDPHSQEYV True H1975_Epitope_Rep2 1188.5047307674402 1188.50362993586 22.093 2 -0.347172504442651 0.08989517523735574 0.9438714419765777 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL', 'ENST00000565932.5_1_16:28734455-28746831:+|nuORF'] 588 4674 AARSKAES True PC9_epitope_Rep4 818.4246299719399 818.42352993586 24.508 2 -0.34717828591978955 0.08989517523735574 0.9438714419765777 ['nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENSG00000048342|ENST00000424120|CC2D2A', 'ENST00000513811.5_1_4:15471657-15545375:+|nuORF', 'ENST00000514450.2_1_4:15471657-15513157:+|nuORF'] 53673 13556 KWWGWERRNRR True NCI_RA007_Epitope_Rep2 1628.8548948913597 1628.85378993586 57.369 2 -0.3472173254635334 0.08992729582833345 0.9438714419765777 ['ENST00000395648.7_2_11:44955194-44955650:-|nuORF'] 11857 4222 DHNDGLGNAF True NCI_RA007_Epitope_Rep5 1058.44173658806 1058.4406299358602 22.778 2 -0.3472343525757204 0.08992729582833345 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 69236 7222 LVNGLTSECQR True H1975_Epitope_Rep3 1218.6026709869 1218.6015699358602 32.751 2 -0.3473700384235346 0.08994176813128639 0.9438714419765777 ['PKHD1|p.G1474R|1|0.08|ENSG00000170927|chr6:52025390-52025390|C/T|missense_variant'] 125891 17027 VNSYFDSFL True PC9_epitope_Rep5 1090.49712620586 1090.4960299358602 70.512 2 -0.3473743972749245 0.08994176813128639 0.9438714419765777 ['nc|ENSG00000138308|Q9BX93-2|PLA2G12B', 'ENSG00000138308|ENST00000373032|PLA2G12B'] 16136 6833 EEEKLAELARQ True H1975_Epitope_Rep1 1314.6779441021397 1314.67630490379 31.327 3 -0.3474341466944558 0.08995306489748385 0.9438714419765777 ['nc|ENSG00000213397|Q99871-3|HAUS7', 'ENSG00000213397|ENST00000370211|HAUS7', 'nc|ENSG00000213397|Q99871-2|HAUS7', 'ENST00000484394.5_1_X:152720945-152722644:-|nuORF'] 112032 14647 TLSVQQTP True PC9_epitope_Rep3 872.4603467743201 872.45924993586 61.474 2 -0.34746354404293867 0.08995306489748385 0.9438714419765777 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS'] 79786 17418 PHYQVSIINI True PC9_epitope_Rep5 1182.6397081186199 1182.63805490379 71.999 3 -0.3474805939320834 0.08995306489748385 0.9438714419765777 ['ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 103768 13767 SRFPEALRL True PC9_epitope_Rep4 1087.61382772395 1087.6127299358602 60.849 2 -0.34754491415134237 0.08995306489748385 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 28036 5052 FRAPRAHAVV True PC9_epitope_Rep5 1122.6410455312998 1122.63940490379 24.46 3 -0.3477004346917265 0.09001887891031636 0.9438714419765777 ['FCRL5|p.Q669H|1|0.19|ENSG00000143297|chr1:157524511-157524511|C/A|missense_variant'] 30425 18846 GAFYMFYF True PC9_epitope_Rep3 1044.44152590604 1044.44042993586 77.713 2 -0.3477066426845482 0.09001887891031636 0.9438714419765777 ['ENST00000556431.1_1_14:105225902-105225959:+|nuORF'] 28958 14119 FTETDDPEEYY True H1975_Epitope_Rep1 1407.53542175903 1407.5343299358601 59.478 2 -0.34772647639392973 0.09001887891031636 0.9438714419765777 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 128703 16956 VSPASFENV True PC9_epitope_Rep1 948.45526139388 948.45471496793 70.044 1 -0.3477970381250054 0.09003493418963267 0.9438714419765777 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 35958 17778 GVASLLLSF True H1975_Epitope_Rep1 905.52221875489 905.52167496793 74.003 1 -0.3479376264277139 0.09004304565662268 0.9438714419765777 ['ENSG00000112514|ENST00000488034|CUTA'] 96527 17875 SELLIMAQEL True PC9_epitope_Rep1 1145.60021137541 1145.59910993586 73.549 2 -0.34800291017172696 0.09004304565662268 0.9438714419765777 ['nc|ENSG00000133816|O94851|MICAL2'] 22723 12491 ETYARYRY True H1975_Epitope_Rep2 1120.53015766964 1120.5290699358602 53.138 2 -0.34808360154965473 0.09004304565662268 0.9438714419765777 ['nc|ENSG00000135454|Q00973-2|B4GALNT1', 'ENSG00000135454|ENST00000341156|B4GALNT1', 'ENST00000553142.5_1_12:58020529-58021701:-|nuORF', 'B4GALNT1|p.P507L|1|0.38|ENSG00000135454|chr12:57626826-57626826|G/A|missense_variant'] 24289 20342 FAAPLILL True H1975_Epitope_Rep2 856.54222592348 856.54112993586 84.297 2 -0.34810253577301314 0.09004304565662268 0.9438714419765777 ['ENSG00000155066|ENST00000317620|PROM2', 'ENST00000487138.5_1_2:95944617-95954741:+|nuORF', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'nc|ENSG00000155066|Q8N271-3|PROM2'] 98619 12714 SINSHATEWSP True H1975_Epitope_Rep3 1227.55201531303 1227.55090993586 54.115 2 -0.34810776964018014 0.09004304565662268 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 34327 15277 GPRLRVRAQHP True PC9_epitope_Rep3 1285.7479702113299 1285.74686993586 63.915 2 -0.34812060986378646 0.09004304565662268 0.9438714419765777 ['ENST00000568500.1_1_16:30709080-30709953:-|nuORF'] 18503 20482 EKPFALFL True H1975_Epitope_Rep1 963.5429541994698 963.54184993586 85.188 2 -0.348191958440053 0.09005909852694717 0.9438714419765777 ['ENSG00000176058|ENST00000409012|TPRN', 'nc|ENSG00000176058|Q4KMQ1-2|TPRN', 'nc|ENSG00000176058|Q4KMQ1-4|TPRN', 'nc|ENSG00000176058|Q4KMQ1-3|TPRN', 'ENST00000477345.1_1_9:140086566-140087185:-|nuORF'] 26817 9403 FLEGLEERK True NCI_RA007_Epitope_Rep1 1119.59242357303 1119.5913299358601 40.567 2 -0.348223899751152 0.09007356183957521 0.9438714419765777 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1'] 55025 21129 LALAIYTGV True PC9_epitope_Rep4 919.53786881903 919.53676993586 89.435 2 -0.34826090363815243 0.09007356183957521 0.9438714419765777 ['ENSG00000105370|ENST00000596399|LIM2', 'nc|ENSG00000105370|P55344-2|LIM2'] 131609 13732 VVYGGGAAEI True PC9_epitope_Rep4 934.4759968384599 934.47488993586 60.717 2 -0.3483203357764273 0.090105664238212 0.9438714419765777 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 652 7707 AATLSSAR True NCI_RA007_Epitope_Rep5 775.41881631551 775.41770993586 36.347 2 -0.3483751195899511 0.090105664238212 0.9438714419765777 ['ENST00000301624.8_1_17:76104411-76104549:+|nuORF'] 92993 21679 RRQWRRRRRPQ True PC9_epitope_Rep3 1649.9675736581698 1649.96646993586 88.687 2 -0.34858814729130033 0.09020991356500264 0.9438714419765777 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 110291 7613 TIGSPAGVTG True PC9_epitope_Rep1 858.44469671018 858.44358993586 34.103 2 -0.3486317815409591 0.09024360127709866 0.9438714419765777 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 9509 9262 AWLRGARVRPE True H1975_Epitope_Rep1 1309.7367368212897 1309.73509490379 40.538 3 -0.34871467411656204 0.09025805655019138 0.9438714419765777 ['ENST00000572418.1_1_17:3806502-3807261:-|nuORF'] 65877 15321 LSLALQRQREK True NCI_RA007_Epitope_Rep1 1340.7888319637998 1340.7877299358602 63.671 2 -0.34875487043385667 0.09025805655019138 0.9438714419765777 ['ENST00000406316.6_3_2:51256197-51256272:-|nuORF'] 76426 19277 NSVEELFSLL True PC9_epitope_Rep4 1149.59175486669 1149.59064993586 82.254 2 -0.3488922504948431 0.0903093801813243 0.9438714419765777 ['ENSG00000124177|ENST00000373233|CHD6'] 66774 10835 LSVASIGDI True H1975_Epitope_Rep1 873.48074786573 873.4801949679301 46.638 1 -0.34893146068663866 0.09032223927191915 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 4543 12748 AKRNRKTNGSI True PC9_epitope_Rep5 1243.71091599627 1243.70926490379 54.042 3 -0.34896344682683567 0.09032223927191915 0.9438714419765777 ['nc|ENSG00000181984|A6NN73|GOLGA8CP', 'ENSG00000153684|ENST00000526619|GOLGA8F', 'ENSG00000183629|ENST00000525590|GOLGA8G'] 4183 16362 AICYQVTP True PC9_epitope_Rep6 893.4316894983299 893.43058993586 75.321 2 -0.34896962209733656 0.09032223927191915 0.9438714419765777 ['ENST00000518062.1_1_5:158588183-158590023:-|nuORF'] 124627 7482 VLIAGGVGINP True H1975_Epitope_Rep3 1008.59678067748 1008.59568993586 33.76 2 -0.34900001165098 0.09033828353733818 0.9438714419765777 ['ENST00000442255.5_1_3:16313687-16345066:+|nuORF', 'ENSG00000154814|ENST00000285083|OXNAD1'] 120231 5500 VFNGHRGQRW True NCI_RA007_Epitope_Rep3 1255.6322717527498 1255.63116993586 28.637 2 -0.34910708281912184 0.09034954675320095 0.9438714419765777 ['RYR1|p.R4174Pfs*35|1|0.31|ENSG00000196218|chr19:38561349-38561352|CCGC/-|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.M2582Afs*19|1|0.11|ENSG00000196218|chr19:38502635-38502636|TA/-|frameshift_variant'] 106410 5871 SVTGAITVAK True NCI_RA007_Epitope_Rep1 945.5494961318899 945.54838993586 26.889 2 -0.34911051133503856 0.09034954675320095 0.9438714419765777 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 44710 13549 IPPHGIDSAI True PC9_epitope_Rep3 1018.54474510462 1018.54364993586 57.172 2 -0.3491201802674678 0.09034954675320095 0.9438714419765777 ['MMP16|p.T451Pfs*16|1|0.21|ENSG00000156103|chr8:88056154-88056154|C/-|frameshift_variant', 'ENSG00000156103|ENST00000286614|MMP16'] 125235 6110 VLQSTQSP True PC9_epitope_Rep5 858.4446967101799 858.44358993586 28.489 2 -0.3491249492265781 0.09034954675320095 0.9438714419765777 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 117440 5428 VADSGLTLK True NCI_RA007_Epitope_Rep3 902.50729696674 902.50618993586 28.363 2 -0.3492088375821131 0.09039607801643565 0.9438714419765777 ['nc|ENSG00000126858|Q8IXI2-4|RHOT1', 'nc|ENSG00000126858|Q8IXI2|RHOT1', 'nc|ENSG00000126858|Q8IXI2-5|RHOT1', 'nc|ENSG00000126858|Q8IXI2-2|RHOT1', 'ENSG00000126858|ENST00000545287|RHOT1', 'nc|ENSG00000126858|Q8IXI2-3|RHOT1'] 36125 6169 GVEQRWETMP True PC9_epitope_Rep1 1231.56555720219 1231.5639149037902 28.544 3 -0.34923008530598126 0.09039607801643565 0.9438714419765777 ['ENST00000594286.5_1_19:53625810-53636169:-|nuORF'] 78312 5268 PASPAAPAA True PC9_epitope_Rep5 751.38645355807 751.38534993586 25.279 2 -0.3492329793337491 0.09039607801643565 0.9438714419765777 ['ENSG00000053918|ENST00000155840|KCNQ1'] 15631 6448 EAWKTQLQK True NCI_RA007_Epitope_Rep2 1130.60840799034 1130.60730993586 29.69 2 -0.3492585277456585 0.09039607801643565 0.9438714419765777 ['ALG10B|p.E212Q|1|0.06|ENSG00000175548|chr12:38320425-38320425|G/C|missense_variant'] 113489 14376 TQSELATAL True PC9_epitope_Rep4 932.4814761417199 932.48092496793 63.206 1 -0.3493219843521084 0.09041211843335038 0.9438714419765777 ['ENSG00000138629|ENST00000395081|UBL7'] 128763 24539 VSQIRLLRILL True H1975_Epitope_Rep3 1322.8761904162197 1322.8750899358602 102.12 2 -0.3494070342721629 0.09042656368477667 0.9438714419765777 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 66534 11279 LSSGHSSYAI True PC9_epitope_Rep6 1020.4876241513199 1020.48652993586 54.397 2 -0.34941144055253176 0.09042656368477667 0.9438714419765777 ['nc|ENSG00000211637|A0A075B6H9|IGLV4-69'] 78819 16876 PEPHILGI True PC9_epitope_Rep5 874.4912529797799 874.49014993586 69.924 2 -0.3494582626064775 0.09044260271557045 0.9438714419765777 ['ABCG5|p.S37I|1|0.24|ENSG00000138075|chr2:43838570-43838570|C/A|missense_variant'] 72598 16229 MVSEELIRV True PC9_epitope_Rep4 1074.57433098074 1074.5732299358601 70.366 2 -0.34950337020949246 0.09045704612780364 0.9438714419765777 ['ENSG00000198793|ENST00000361445|MTOR'] 129486 5046 VTETPYGQVS True H1975_Epitope_Rep2 1079.5135045459897 1079.5124099358602 24.491 2 -0.3495479133672932 0.09045704612780364 0.9438714419765777 ['ENSG00000266714|ENST00000645453|MYO15B', 'ENST00000580701.1_1_17:73590570-73590847:+|nuORF'] 16929 7951 EGEAQRYFD True H1975_Epitope_Rep1 1113.47270236317 1113.4716099358602 35.531 2 -0.34958525192838974 0.09048752534602839 0.9438714419765777 ['ENSG00000176853|ENST00000334705|FAM91A1'] 123137 8264 VHDSIAWHGC True H1975_Epitope_Rep2 1123.48691295867 1123.48525490379 36.739 3 -0.3495911052760498 0.09048752534602839 0.9438714419765777 ['ZNF536|p.Q995H|1|0.14|ENSG00000198597|chr19:30548604-30548604|G/T|missense_variant'] 8724 15263 AVDPEKIQLYS True H1975_Epitope_Rep1 1261.65541775241 1261.65432993586 63.973 2 -0.34963180756589896 0.09048752534602839 0.9438714419765777 ['ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 93499 19872 RSKRQLRRYPR True NCI_RA007_Epitope_Rep3 1514.9018450837798 1514.9007499358602 86.607 2 -0.3496707724110349 0.09049717912552892 0.9438714419765777 ['nc|ENSG00000008277|Q9P0K1-5|ADAM22', 'nc|ENSG00000008277|Q9P0K1-2|ADAM22', 'nc|ENSG00000008277|Q9P0K1|ADAM22', 'ENSG00000008277|ENST00000413139|ADAM22', 'ADAM22|p.G744Afs*4|1|0.28|ENSG00000008277|chr7:88168175-88168175|G/-|frameshift_variant', 'nc|ENSG00000008277|Q9P0K1-4|ADAM22', 'nc|ENSG00000008277|Q9P0K1-3|ADAM22', 'ADAM22|p.L807Sfs*88|1|0.24|ENSG00000008277|chr7:88181512-88181512|G/-|frameshift_variant'] 18133 4167 EIMKELMENGP True NCI_RA007_Epitope_Rep4 1289.5995597524097 1289.59792490379 22.327 3 -0.3496954449260253 0.09049717912552892 0.9438714419765777 ['ENST00000480586.1_1_1:32050752-32051478:+|nuORF', 'nc|ENSG00000142910|Q9GZM7-2|TINAGL1', 'ENST00000481165.5_1_1:32050098-32051133:+|nuORF', 'nc|ENSG00000142910|Q9GZM7-3|TINAGL1', 'ENSG00000142910|ENST00000271064|TINAGL1'] 84386 20030 QGCDIIPLAKL True PC9_epitope_Rep2 1169.6478302741698 1169.64619490379 82.449 3 -0.34970672132458785 0.09049717912552892 0.9438714419765777 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 123809 13860 VITVHQISP True PC9_epitope_Rep4 992.5654805492 992.56438993586 61.214 2 -0.34971951030268805 0.09049717912552892 0.9438714419765777 ['ENSG00000172318|ENST00000392690|B3GALT1'] 93589 25246 RSVFRKRKHLL True PC9_epitope_Rep1 1438.89971982546 1438.89862993586 101.99 2 -0.34972671883579803 0.09049717912552892 0.9438714419765777 ['ENST00000581444.5_1_18:20956852-20964997:-|nuORF'] 130613 21463 VVAGQALLL True PC9_epitope_Rep4 882.5538532363399 882.5533049679301 90.747 1 -0.3497789123553886 0.0905260559904097 0.9438714419765777 ['SLC7A13|p.P125Sfs*10|1|0.23|ENSG00000164893|chr8:86229905-86229906|-/A|frameshift_variant', 'nc|ENSG00000164893|Q8TCU3-2|SLC7A13', 'ENSG00000164893|ENST00000297524|SLC7A13', 'SLC7A13|p.G106W|1|0.27|ENSG00000164893|chr8:86229962-86229962|C/A|missense_variant', 'SLC7A13|p.G106V|1|0.26|ENSG00000164893|chr8:86229961-86229961|C/A|missense_variant'] 67869 14978 LTKEYDRLLEE True NCI_RA007_Epitope_Rep2 1407.7245599413898 1407.72346993586 62.943 2 -0.3497813292165139 0.0905260559904097 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 17498 14905 EHIFKWIT True PC9_epitope_Rep6 1072.57056592964 1072.56946993586 69.323 2 -0.34979865940909655 0.0905260559904097 0.9438714419765777 ['ENSG00000239305|ENST00000237455|RNF103'] 60490 12535 LIMRLKMFL True PC9_epitope_Rep4 1163.6922783687899 1163.69062490379 56.036 3 -0.34983908852579076 0.0905260559904097 0.9438714419765777 ['ENSG00000177990|ENST00000324472|DPY19L2', 'ENST00000413230.6_1_12:63954294-63977630:-|nuORF', 'ENST00000436258.1_1_7:35131492-35145694:-|nuORF'] 81848 8833 PSHQEATL True PC9_epitope_Rep1 881.42429561877 881.42318993586 38.817 2 -0.34991109537793097 0.09054208902600265 0.9438714419765777 ['ENST00000521305.5_1_5:179228789-179229839:-|nuORF'] 139489 15814 YTGTPDWLY True H1975_Epitope_Rep2 1114.4971262058598 1114.49657496793 66.015 1 -0.3499777243859885 0.09055333251070881 0.9438714419765777 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 120875 9258 VGDVFRGG True PC9_epitope_Rep1 805.4082516318099 805.40714993586 40.464 2 -0.35003389181733174 0.09055333251070881 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 61108 18833 LLCTVMELF True PC9_epitope_Rep1 1067.53952569515 1067.5384299358602 77.226 2 -0.35016303515318686 0.09055333251070881 0.9438714419765777 ['ENST00000417581.1_1_10:30637795-30637855:-|nuORF'] 44924 4840 IQEEKENTEQR True NCI_RA007_Epitope_Rep4 1402.6688359704199 1402.66720490379 25.054 3 -0.3501678889608968 0.09055333251070881 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'ENST00000526262.5_1_11:70189825-70228249:+|nuORF', 'ENST00000532504.5_1_11:70185286-70228249:+|nuORF'] 61907 19386 LLLLFFMIIFA True PC9_epitope_Rep6 1339.7977889831502 1339.79668993586 87.219 2 -0.35017783192641155 0.0905693636523885 0.9438714419765777 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF'] 103236 7265 SQSKVLPVP True H1975_Epitope_Rep2 953.5545815123298 953.55348993586 32.881 2 -0.35024900148497723 0.09060302127584566 0.9438714419765777 ['CON__P02666'] 65229 15907 LSEDWRDPNI True PC9_epitope_Rep1 1243.5833154413099 1243.5816749037901 65.997 3 -0.3503092232043148 0.09061106508980031 0.9438714419765777 ['ENST00000532981.1_1_11:125333376-125359673:-|nuORF', 'ENST00000392709.8_1_11:125325619-125359673:-|nuORF', 'ENSG00000149557|ENST00000278919|FEZ1'] 117800 8301 VAMEAVAA True H1975_Epitope_Rep2 760.3789256494799 760.37782993586 36.882 2 -0.3503240144401696 0.09061106508980031 0.9438714419765777 ['GLI2|p.Q1236Sfs*2|1|0.25|ENSG00000074047|chr2:120989667-120989667|C/-|frameshift_variant', 'ENSG00000074047|ENST00000361492|GLI2', 'nc|ENSG00000074047|P10070|GLI2', 'nc|ENSG00000074047|P10070-4|GLI2', 'nc|ENSG00000074047|P10070-3|GLI2', 'ENST00000452692.5_1_2:121728002-121748192:+|nuORF', 'ENST00000438299.5_1_2:121728002-121748192:+|nuORF', 'nc|ENSG00000074047|P10070-2|GLI2', 'nc|ENSG00000074047|P10070-1|GLI2'] 115560 13647 TVIAETELLG True H1975_Epitope_Rep2 1044.5702911461199 1044.56977496793 57.634 1 -0.3503590677866405 0.09061106508980031 0.9438714419765777 ['ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant'] 116891 11814 TYPAELNNI True NCI_RA007_Epitope_Rep3 1033.50802524273 1033.50747496793 53.588 1 -0.3503848841314361 0.09061106508980031 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 83597 11778 QDVAPNPDDP True H1975_Epitope_Rep2 1066.45671794586 1066.45562993586 50.378 2 -0.3503964967172396 0.09061106508980031 0.9438714419765777 ['nc|ENSG00000130956|Q5JVS0-2|HABP4', 'ENSG00000130956|ENST00000375249|HABP4'] 29344 12802 FVDWC[Carbamidomethyl]PTGFK True H1975_Epitope_Rep3 1255.5695802328999 1255.56848993586 54.459 2 -0.3504289111760261 0.09061106508980031 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000178462|ENST00000380419|TUBAL3', 'nc|ENSG00000178462|A6NHL2-2|TUBAL3', 'TUBAL3|p.V360M|1|0.41|ENSG00000178462|chr10:5393780-5393780|C/T|missense_variant', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 60557 19584 LIQEELLEK True PC9_epitope_Rep1 1113.6281403754099 1113.6270499358602 80.157 2 -0.3504729720041409 0.09065914698625309 0.9438714419765777 ['nc|ENSG00000122483|Q5T9S5-2|CCDC18', 'nc|ENSG00000122483|Q5T9S5|CCDC18', 'ENSG00000122483|ENST00000690025|CCDC18'] 69879 9293 LYAQRRWQK True NCI_RA007_Epitope_Rep2 1247.6887239997097 1247.68762993586 40.758 2 -0.3504893498536006 0.09065914698625309 0.9438714419765777 ['nc|ENSG00000148219|O75129-2|ASTN2', 'nc|ENSG00000148219|O75129-3|ASTN2', 'ENSG00000148219|ENST00000313400|ASTN2', 'ASTN2|p.P596Lfs*90|3|0.21|ENSG00000148219|chr9:116975310-116975310|G/-|frameshift_variant'] 30301 7049 GAATHVVI True PC9_epitope_Rep2 766.43373810366 766.43264993586 32.512 2 -0.35049060058637505 0.09065914698625309 0.9438714419765777 ['nc|ENSG00000128309|P25325|MPST', 'ENST00000485587.1_1_22:37419962-37421138:+|nuORF', 'ENSG00000128309|ENST00000429360|MPST'] 12697 17886 DLFGVKGG True PC9_epitope_Rep5 791.4177536863499 791.41664993586 73.815 2 -0.35050638326189965 0.09067517315521405 0.9438714419765777 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 117226 14975 TYVFFVNTL True NCI_RA007_Epitope_Rep5 1102.5698972233 1102.5688099358601 64.268 2 -0.3505601445011188 0.09068960047935429 0.9438714419765777 ['ENSG00000169402|ENST00000404077|RSPH10B2'] 82162 13458 PTEATPSSTF True H1975_Epitope_Rep2 1036.47130538084 1036.47020993586 56.901 2 -0.3505957019211065 0.09068960047935429 0.9438714419765777 ['ENSG00000164830|ENST00000517566|OXR1', 'nc|ENSG00000164830|Q8N573|OXR1', 'nc|ENSG00000164830|Q8N573-3|OXR1', 'nc|ENSG00000164830|Q8N573-5|OXR1', 'nc|ENSG00000164830|Q8N573-2|OXR1'] 85878 22340 QNILSPLML True PC9_epitope_Rep2 1027.5736027047499 1027.5725099358601 91.417 2 -0.3506170568305679 0.09070562526434513 0.9438714419765777 ['ENSG00000185958|ENST00000327337|FAM186A'] 36611 18863 GVLKVVIGV True PC9_epitope_Rep5 882.5902387450599 882.58914993586 77.574 2 -0.3507616334385046 0.09075529552743805 0.9438714419765777 ['SLC9B2|p.E309K|3|0.17|ENSG00000164038|chr4:103044961-103044961|C/T|missense_variant'] 132292 13118 VYLISPDTK True PC9_epitope_Rep2 1034.5648118428599 1034.56370993586 55.733 2 -0.35077368067018866 0.09075529552743805 0.9438714419765777 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'ENST00000491553.1_1_4:38016582-38022367:+|nuORF'] 1274 4813 AEDREQLVA True H1975_Epitope_Rep1 1029.50908787189 1029.50798993586 23.586 2 -0.3507846029661821 0.09078734052301403 0.9438714419765777 ['ENSG00000100867|ENST00000250383|DHRS2', 'ENST00000556729.1_1_14:24108037-24109131:+|nuORF', 'ENST00000553896.5_1_14:24099332-24110898:+|nuORF', 'nc|ENSG00000100867|Q13268-2|DHRS2'] 83526 13682 QDLATVSLWQP True NCI_RA007_Epitope_Rep2 1256.6401020414398 1256.63900993586 57.863 2 -0.3508033592763079 0.09078734052301403 0.9438714419765777 ['ENST00000305366.7_1_3:149093296-149093356:-|nuORF'] 35857 13828 GVAANLVNAL True PC9_epitope_Rep1 940.5341804209199 940.53308993586 58.032 2 -0.3508218047657423 0.09080336217378279 0.9438714419765777 ['ENSG00000142494|ENST00000270570|SLC47A1', 'nc|ENSG00000142494|Q96FL8-3|SLC47A1', 'nc|ENSG00000142494|Q96FL8-2|SLC47A1', 'ENST00000497548.5_1_17:19437252-19459239:+|nuORF'] 137569 11859 YLSKMRVWFYR True NCI_RA007_Epitope_Rep1 1547.8071248802298 1547.8060299358601 50.11 2 -0.35087499740282224 0.09081138225706986 0.9438714419765777 ['ENST00000292363.9_1_19:651790-663233:-|nuORF'] 96474 6227 SEIYRWICDNF True PC9_epitope_Rep6 1444.6445357988798 1444.64287490379 32.431 3 -0.35087570023578957 0.09081138225706986 0.9438714419765777 ['ENSG00000065970|ENST00000162391|FOXJ2', 'FOXJ2|p.H385Tfs*37|1|0.31|ENSG00000065970|chr12:8048215-8048215|C/-|frameshift_variant', 'nc|ENSG00000065970|Q9P0K8-2|FOXJ2'] 12821 4803 DLKKIQFPKKE True NCI_RA007_Epitope_Rep2 1372.8078360728798 1372.8061949037901 23.31 3 -0.3508837014108422 0.09081138225706986 0.9438714419765777 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5', 'ENST00000532042.5_1_11:65479717-65480742:+|nuORF', 'ENST00000527544.5_1_11:65480238-65482390:+|nuORF', 'KAT5|p.P249Rfs*32|1|0.2|ENSG00000172977|chr11:65714646-65714646|C/-|frameshift_variant'] 75123 18854 NMVDIIHSV True PC9_epitope_Rep4 1026.51681610462 1026.51570993586 80.608 2 -0.3509228735742793 0.09081138225706986 0.9438714419765777 ['ENST00000475214.5_1_3:135974226-136045892:+|nuORF', 'ENSG00000114054|ENST00000251654|PCCB', 'nc|ENSG00000114054|P05166-2|PCCB'] 123883 21199 VKEYTMIIL True PC9_epitope_Rep3 1108.620218544 1108.6191299358602 86.832 2 -0.3509771497361782 0.09081138225706986 0.9438714419765777 ['OR5M3|p.G202S|2|0.18|ENSG00000174937|chr11:56469894-56469894|C/T|missense_variant', 'OR5M3|p.H242Ifs*2|1|0.75|ENSG00000174937|chr11:56469774-56469774|G/-|frameshift_variant', 'ENSG00000174937|ENST00000641993|OR5M3'] 89923 12255 RFVEKYTEL True PC9_epitope_Rep2 1183.62372370131 1183.62208490379 52.449 3 -0.35107543983127154 0.09081138225706986 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 48429 13148 KEEDVLKFLAA True H1975_Epitope_Rep2 1261.69180326113 1261.69015490379 55.696 3 -0.35118230293573754 0.09082740150821059 0.9438714419765777 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 14476 15931 DTTAELAVSL True PC9_epitope_Rep1 1018.5182555732599 1018.51714993586 66.088 2 -0.3514104143186495 0.09094592927993798 0.9438714419765777 ['ENST00000493368.5_1_9:37422710-37428742:+|nuORF', 'ENSG00000137106|ENST00000318158|GRHPR', 'ENST00000460882.5_1_9:37422710-37436776:+|nuORF', 'ENST00000377824.8_1_9:37422741-37431094:+|nuORF'] 61764 18939 LLKEQQGLFLF True PC9_epitope_Rep4 1334.7598232512998 1334.75818490379 80.936 3 -0.3514131371699074 0.09094592927993798 0.9438714419765777 ['ENST00000530758.1_1_3:10168005-10168191:+|nuORF'] 25342 11879 FEFSISNQTLK True NCI_RA007_Epitope_Rep2 1312.66631678928 1312.66520993586 50.809 2 -0.35143212066522356 0.09094592927993798 0.9438714419765777 ['ENST00000396408.7_1_19:53912606-53912957:+|nuORF'] 16353 14085 EEKRQLSL True PC9_epitope_Rep6 1001.5505587610498 1001.54946993586 66.05 2 -0.35148552079264433 0.09095393288117679 0.9438714419765777 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'BRD4|p.D621H|1|0.18|ENSG00000141867|chr19:15255483-15255483|C/G|missense_variant', 'ENSG00000141867|ENST00000679869|BRD4'] 25477 14667 FENVARLL True PC9_epitope_Rep3 960.5392658013599 960.53816993586 61.554 2 -0.3514982371969532 0.09095393288117679 0.9438714419765777 ['ENSG00000170209|ENST00000303941|ANKK1'] 23469 11197 EVYEYWIKK True NCI_RA007_Epitope_Rep1 1256.6441247927198 1256.64302993586 47.554 2 -0.3515447522425072 0.09095393288117679 0.9438714419765777 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32581422-32635732:-|nuORF'] 22568 5667 ETMKDQQK True NCI_RA007_Epitope_Rep4 1006.4753452154599 1006.47424993586 28.404 2 -0.35155443487433646 0.09095393288117679 0.9438714419765777 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1'] 12301 4859 DITANLDSP True H1975_Epitope_Rep2 944.445090633 944.44398993586 23.777 2 -0.3515801073480508 0.09095393288117679 0.9438714419765777 ['ENST00000522601.5_1_8:8086126-8093767:+|nuORF', 'ENST00000459803.5_1_3:75472114-75480048:-|nuORF', 'ENST00000484945.5_1_3:75472114-75480048:-|nuORF'] 30638 14068 GALEPHINAQI True PC9_epitope_Rep2 1161.61422164677 1161.6131299358601 59.389 2 -0.3515885351103542 0.09095393288117679 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 93139 14394 RRRRKIKRQY True NCI_RA007_Epitope_Rep2 1458.91201584466 1458.9103649037902 60.654 3 -0.3516840562930913 0.09102279533523588 0.9438714419765777 ['ENST00000320876.10_2_18:2688638-2694582:+|nuORF'] 81329 5183 PPRPPPPPP True PC9_epitope_Rep2 950.5337864980999 950.53268993586 25.324 2 -0.35172170589865615 0.09103880775802843 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 128986 20663 VSVYNSYPYYP True PC9_epitope_Rep1 1350.61321858726 1350.6121299358601 84.303 2 -0.35175314555995985 0.09107243517474634 0.9438714419765777 ['nc|ENSG00000167034|Q99801-3|NKX3-1', 'nc|ENSG00000167034|Q99801-4|NKX3-1', 'nc|ENSG00000167034|Q99801-2|NKX3-1', 'nc|ENSG00000167034|Q99801-5|NKX3-1', 'ENSG00000167034|ENST00000380871|NKX3-1'] 126542 18380 VPPAVTGITFL True NCI_RA007_Epitope_Rep1 1113.64339651673 1113.6422899358602 75.628 2 -0.3518109752551052 0.09108844615899522 0.9438714419765777 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 66223 14621 LSPSLCESLSF True PC9_epitope_Rep1 1181.5638258666902 1181.56272993586 61.062 2 -0.3518720716626536 0.09110445657917915 0.9438714419765777 ['ENST00000443035.7_1_15:65994691-65994772:-|nuORF'] 57404 14598 LEHYMLVL True PC9_epitope_Rep2 1016.5364889200399 1016.5353899358599 61.42 2 -0.3519541382600445 0.09113326522704054 0.9438714419765777 ['nc|ENSG00000100376|Q9NWS6-2|FAM118A', 'ENSG00000100376|ENST00000441876|FAM118A'] 79589 7226 PGVDSVPLQHT True NCI_RA007_Epitope_Rep5 1148.5825871653199 1148.5814899358602 34.472 2 -0.3519593849936683 0.09113326522704054 0.9438714419765777 ['CTNND2|p.R471H|2|0.54|ENSG00000169862|chr5:11346588-11346588|C/T|missense_variant'] 28299 12988 FRYMRIYRRYI True H1975_Epitope_Rep1 1635.8820211559898 1635.8809299358602 55.038 2 -0.35196403528780973 0.09113326522704054 0.9438714419765777 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 86126 11819 QPRDILCGA True PC9_epitope_Rep5 971.4858503295098 971.48474993586 50.457 2 -0.35197739499994324 0.09113326522704054 0.9438714419765777 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'nc|ENSG00000144028|O75643-2|SNRNP200'] 45981 19866 ISSVPWYIDP True PC9_epitope_Rep3 1175.58627556343 1175.5851699358602 81.651 2 -0.35207604088144046 0.09118450022016733 0.9438714419765777 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000521190.5_1_5:159840839-159846079:-|nuORF'] 120412 19626 VFSVKTEMI True PC9_epitope_Rep4 1052.55761828744 1052.55652993586 83.608 2 -0.35215320994835164 0.0912005072565873 0.9438714419765777 ['ENSG00000116918|ENST00000366639|TSNAX'] 83581 8931 QDSSATEHWP True H1975_Epitope_Rep3 1156.4785160196 1156.4774099358601 39.35 2 -0.35219751681671496 0.0912341264948835 0.9438714419765777 ['ENST00000511828.1_1_4:100575555-100575762:-|nuORF'] 92448 9172 RQVQQVNI True PC9_epitope_Rep3 983.5512274673899 983.55012993586 40.22 2 -0.3522675705981513 0.09126774454894501 0.9438714419765777 ['ENST00000528538.5_3_11:47521091-47521142:-|nuORF'] 30452 6061 GAGEARNASPR True NCI_RA007_Epitope_Rep3 1084.5373683084 1084.5362699358602 30.824 2 -0.3523209118625126 0.09128053398143746 0.9438714419765777 ['ENST00000508458.2_1_5:41870176-41871044:+|nuORF'] 79247 7161 PGGLCIKNK True PC9_epitope_Rep3 928.5164221818 928.51532993586 32.558 2 -0.3524303343190402 0.09128053398143746 0.9438714419765777 ['nc|ENSG00000181171|Q8NA97|FER1L6-AS1'] 32792 12131 GIDVWEHAY True H1975_Epitope_Rep3 1088.4927095317598 1088.4916099358602 51.829 2 -0.3524305668500926 0.09128053398143746 0.9438714419765777 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-4|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2', 'ENST00000541573.5_1_6:160103527-160113001:-|nuORF', 'ENST00000535459.5_1_6:160103527-160109299:-|nuORF', 'ENST00000546260.5_1_6:160103527-160113680:-|nuORF'] 39920 6425 HQLHLQQQL True NCI_RA007_Epitope_Rep4 1143.61489035311 1143.61378993586 31.314 2 -0.35250815238834327 0.09132854325162018 0.9438714419765777 ['nc|ENSG00000188483|Q5T953-2|IER5L', 'ENSG00000188483|ENST00000372491|IER5L'] 869 7747 ADLAGELR True H1975_Epitope_Rep3 843.4450310633499 843.44392993586 34.781 2 -0.3525287845775092 0.09132854325162018 0.9438714419765777 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 60561 6215 LIQQWMVP True H1975_Epitope_Rep3 1013.53682327321 1013.53572993586 28.92 2 -0.3525352936130551 0.09132854325162018 0.9438714419765777 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 34222 6529 GPKEPGFEA True PC9_epitope_Rep2 930.4446967101799 930.44358993586 30.529 2 -0.3526935448910689 0.09136054661360195 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 112148 20826 TLVFHAGFGV True PC9_epitope_Rep1 1046.5549158654999 1046.55380993586 84.935 2 -0.35274220302620035 0.09136054661360195 0.9438714419765777 ['RARS1|p.R435L|1|0.39|ENSG00000113643|chr5:168506789-168506789|G/T|missense_variant'] 38817 6389 HIDQALTPD True H1975_Epitope_Rep2 1008.48762415132 1008.48652993586 29.499 2 -0.35278286806948916 0.09137493836726068 0.9438714419765777 ['ENSG00000129159|ENST00000265969|KCNC1'] 112881 11256 TPPPGLASA True PC9_epitope_Rep1 809.42831837005 809.4272299358599 48.175 2 -0.35280282742268654 0.09137493836726068 0.9438714419765777 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 19253 10896 ELLHGDLASL True PC9_epitope_Rep3 1066.56587447202 1066.56476993586 46.894 2 -0.3528808157183994 0.09139093838595502 0.9438714419765777 ['ENSG00000175029|ENST00000309035|CTBP2', 'CTBP2|p.Y212Lfs*38|1|0.35|ENSG00000175029|chr10:124994615-124994616|-/G|frameshift_variant'] 92573 732 RRCHMVERLC True H1975_Epitope_Rep1 1301.6267350734497 1301.6250749037902 3.8261 3 -0.35289548554097283 0.09142454657510125 0.9438714419765777 ['ENSG00000105708|ENST00000344099|ZNF14'] 3001 19096 AFPAASSTPV True PC9_epitope_Rep1 946.47599683846 946.47488993586 78.242 2 -0.3529944409090263 0.09144054515680301 0.9438714419765777 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|97|2|anti-sense', 'chrX:97120275-97141665|243|53.54|0.12|8.77|+|2|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|17'] 72909 5735 NAYDEHQTL True NCI_RA007_Epitope_Rep4 1089.4727023631701 1089.4716099358602 28.677 2 -0.3530761801169729 0.09149014843378585 0.9438714419765777 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF', 'nc|ENSG00000185246|Q86UA1-2|PRPF39', 'ENST00000554785.1_1_14:45579308-45583868:+|nuORF'] 45462 13970 ISEGKISTI True PC9_epitope_Rep2 946.53351171458 946.53240993586 59.009 2 -0.3531778143255506 0.09149014843378585 0.9438714419765777 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF'] 74435 9228 NIVSEKTI True PC9_epitope_Rep5 902.50729696674 902.50618993586 40.442 2 -0.3532584314318521 0.09150453384981072 0.9438714419765777 ['OR5M11|p.L249Cfs*11|1|0.19|ENSG00000255223|chr11:56542513-56542513|G/-|frameshift_variant', 'ENSG00000255223|ENST00000528616|OR5M11'] 47559 23043 IYMDTLNIF True PC9_epitope_Rep2 1128.5525329069999 1128.55197496793 94.127 1 -0.3532805908236872 0.09150453384981072 0.9438714419765777 ['ENSG00000165678|ENST00000372134|GHITM'] 62487 16304 LLSPLMTRYF True H1975_Epitope_Rep3 1239.6685657187502 1239.66746993586 68.188 2 -0.35329876649785436 0.09153652481645157 0.9438714419765777 ['ENSG00000178201|ENST00000321039|VN1R1'] 42728 18098 IFCLVNHVSF True PC9_epitope_Rep1 1177.59540077849 1177.59376490379 74.406 3 -0.35332738799977953 0.09153652481645157 0.9438714419765777 ['ENST00000496524.5_1_2:110922048-110962545:-|nuORF', 'nc|ENSG00000144061|O15259|NPHP1', 'nc|ENSG00000144061|O15259-4|NPHP1'] 129426 6107 VTEISREVV True NCI_RA007_Epitope_Rep1 1030.56587447202 1030.56476993586 27.792 2 -0.3533558146541388 0.09155251945491039 0.9438714419765777 ['ENSG00000121931|ENST00000369763|LRIF1'] 57794 18599 LEPGEVVVP True H1975_Epitope_Rep2 937.5120479940099 937.51149496793 77.188 1 -0.3533622725287924 0.0915861194739344 0.9438714419765777 ['ENSG00000204946|ENST00000434415|ZNF783'] 28227 13651 FRRRRWRRRME True NCI_RA007_Epitope_Rep2 1703.9491467127098 1703.9475149037899 57.74 3 -0.35346278052546515 0.09161971830985915 0.9438714419765777 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 12175 16863 DILADLIPK True H1975_Epitope_Rep1 996.5855472874399 996.58444993586 70.273 2 -0.3535181182018385 0.09165331596274713 0.9438714419765777 ['ENST00000546621.5_1_12:56668606-56679804:-|nuORF', 'ENSG00000062485|ENST00000351328|CS'] 19705 19051 ELSGTTIIS True PC9_epitope_Rep2 919.48622716899 919.4856749679301 78.644 1 -0.3535429770414442 0.09166930741875286 0.9438714419765777 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 6509 5887 APTSPRPSLG True PC9_epitope_Rep1 981.5243440132099 981.52324993586 27.461 2 -0.3535728335975406 0.09168045628982854 0.9438714419765777 ['nc|ENSG00000180316|Q8N8W4-2|PNPLA1', 'nc|ENSG00000180316|Q8N8W4-3|PNPLA1', 'KCTD20-PNPLA1|1|fusion', 'nc|ENSG00000180316|Q8N8W4|PNPLA1', 'ENSG00000180316|ENST00000636260|PNPLA1'] 135460 9191 YEAPTIVLDP True H1975_Epitope_Rep3 1116.5702911461199 1116.56918993586 40.344 2 -0.3536033839837828 0.09168045628982854 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 29006 17851 FTIIGQVASV True PC9_epitope_Rep4 1033.5807962601698 1033.5796899358602 76.701 2 -0.35360417612535405 0.09168045628982854 0.9438714419765777 ['ENSG00000198727|ENST00000361789|MT-CYB'] 72724 8890 MYRRWWEQFVQ True PC9_epitope_Rep2 1627.77180200067 1627.7701649037901 39.55 3 -0.35367435048251156 0.09168045628982854 0.9438714419765777 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 44569 7235 IPEPGCTK True H1975_Epitope_Rep3 843.41603943419 843.41549496793 32.801 1 -0.3536991062684387 0.09171404932490713 0.9438714419765777 ['ENSG00000163209|ENST00000295367|SPRR3'] 140470 8476 YYICFDTFTEY True H1975_Epitope_Rep3 1463.5955199177897 1463.59442993586 37.588 2 -0.35376911294840657 0.09174764117729897 0.9438714419765777 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1', 'ENST00000588953.1_1_18:60506025-60506217:+|nuORF'] 116317 7253 TVWNNWFYRRF True H1975_Epitope_Rep1 1587.77351625283 1587.7718849037901 32.908 3 -0.3538509269326193 0.09176362900244679 0.9438714419765777 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 39159 10419 HLEQEIYVNKK True NCI_RA007_Epitope_Rep1 1399.7459640923096 1399.7448699358602 44.511 2 -0.3538759303067298 0.09177961626474213 0.9438714419765777 ['ENSG00000118193|ENST00000367350|KIF14'] 77820 6716 PAEQRERK True PC9_epitope_Rep1 1012.5413910596799 1012.54028993586 30.636 2 -0.35389234955576426 0.09179075579962685 0.9438714419765777 ['ENSG00000078061|ENST00000377045|ARAF'] 45303 17482 ISAPPSVCSDP True PC9_epitope_Rep1 1071.49066092643 1071.4895699358601 72.04 2 -0.3539215105561424 0.09179075579962685 0.9438714419765777 ['ADD1-FAM193A|4|fusion', 'ADD1-FAM193A|3|fusion', 'ADD1-FAM193A|1|fusion', 'ADD1-FAM193A|2|fusion', 'nc|ENSG00000125386|P78312-3|FAM193A', 'nc|ENSG00000125386|P78312-4|FAM193A', 'nc|ENSG00000125386|P78312-6|FAM193A', 'nc|ENSG00000125386|P78312-2|FAM193A', 'nc|ENSG00000125386|P78312-5|FAM193A', 'nc|ENSG00000125386|P78312|FAM193A', 'ENSG00000125386|ENST00000637812|FAM193A'] 29174 8722 FTYTPGTR True NCI_RA007_Epitope_Rep1 941.4606811274899 941.45958993586 37.928 2 -0.3539237956307975 0.09179075579962685 0.9438714419765777 ['nc|ENSG00000072736|Q12968-5|NFATC3'] 96400 14747 SEIDLLNIRR True PC9_epitope_Rep4 1227.6935345966301 1227.69187490379 64.658 3 -0.3539242212032889 0.09179075579962685 0.9438714419765777 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 94574 4013 RYIRDAHTF True NCI_RA007_Epitope_Rep3 1177.59924028897 1177.5976049037902 22.225 3 -0.35397462732404084 0.09180674117750594 0.9438714419765777 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 45980 19915 ISSVPWYIDP True PC9_epitope_Rep1 1175.58627556343 1175.5851699358602 81.421 2 -0.35402059324712015 0.09182110987908548 0.9438714419765777 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000521190.5_1_5:159840839-159846079:-|nuORF'] 23034 17144 EVKKYVLP True PC9_epitope_Rep3 974.5800679841799 974.57896993586 71.1 2 -0.3540222643835658 0.09182110987908548 0.9438714419765777 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000007350', 'CON__P01030'] 74841 10518 NLQEAEEWYK True NCI_RA007_Epitope_Rep5 1308.59863115228 1308.5975299358602 47.09 2 -0.35405188057660725 0.09183547756912301 0.9438714419765777 ['ENSG00000026025|ENST00000544301|VIM', 'ENST00000421459.2_2_10:17272631-17276850:+|nuORF', 'ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 18371 7077 EIYPEWNPD True H1975_Epitope_Rep1 1161.49785448185 1161.4967499358602 32.248 2 -0.3540579403181183 0.09183547756912301 0.9438714419765777 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3'] 34438 8220 GQAFRTLP True NCI_RA007_Epitope_Rep4 888.4817509252399 888.48064993586 38.406 2 -0.35419018435675803 0.09184984424772531 0.9438714419765777 ['ENST00000301618.8_1_17:74946102-74946387:+|nuORF'] 116878 5655 TYNQKHSLF True NCI_RA007_Epitope_Rep5 1136.5614577979202 1136.56036993586 28.44 2 -0.35419926324265794 0.09184984424772531 0.9438714419765777 ['ENSG00000165175|ENST00000614558|MID1IP1'] 103359 13941 SQVLLEENNYL True H1975_Epitope_Rep2 1320.6561460284 1320.65504993586 58.772 2 -0.3542528587852747 0.09186582661645137 0.9438714419765777 ['ENSG00000204659|ENST00000376974|CBY3'] 69002 20853 LVGSVSGFY True PC9_epitope_Rep5 927.47018318203 927.46963496793 85.26 1 -0.35429868271267273 0.09189778966633817 0.9438714419765777 ['ENST00000411500.5_1_6:32520814-32525810:-|nuORF'] 93070 2615 RRRKRKKRK True NCI_RA007_Epitope_Rep4 1310.8959718576996 1310.89432490379 14.68 3 -0.35432776605285343 0.09189778966633817 0.9438714419765777 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 15671 6530 EC[Carbamidomethyl]GKAFTCSSY True H1975_Epitope_Rep2 1251.49000958286 1251.4889099358602 30.029 2 -0.3545108877579014 0.0919649456234822 0.9438714419765777 ['ENSG00000169981|ENST00000396056|ZNF35'] 80420 9671 PLKEEEYRKLR True NCI_RA007_Epitope_Rep2 1459.8147123584697 1459.81360993586 42.236 2 -0.35454441075626614 0.0919649456234822 0.9438714419765777 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 98346 9990 SIGVQSAVI True PC9_epitope_Rep1 872.4967322830398 872.49562993586 43.292 2 -0.3546190780653572 0.09198092456050821 0.9438714419765777 ['DDX47|p.L327Hfs*11|1|0.39|ENSG00000213782|chr12:12824617-12824621|AGGTT/-|frameshift_variant', 'ENST00000541537.5_1_12:12966301-12977638:+|nuORF', 'ENSG00000213782|ENST00000358007|DDX47', 'nc|ENSG00000213782|Q9H0S4-2|DDX47', 'ENST00000545038.5_1_12:12966301-12976268:+|nuORF'] 33764 11154 GLSLQAQLL True H1975_Epitope_Rep3 941.5545815123298 941.55348993586 47.999 2 -0.35465504583069524 0.09201449989441825 0.9438714419765777 ['ENST00000609439.2_2_7:45847154-45848297:+|nuORF'] 101009 12207 SLTFMPETFPA True NCI_RA007_Epitope_Rep2 1239.5845613112701 1239.5834699358602 52.082 2 -0.3546982656381524 0.09202885799753652 0.9438714419765777 ['ENST00000283875.5_1_3:120500445-120500493:+|nuORF'] 68350 12974 LTSGIDSSTL True PC9_epitope_Rep4 992.5026055091201 992.50150993586 57.799 2 -0.3547010546170636 0.09202885799753652 0.9438714419765777 ['ENSG00000171940|ENST00000371471|ZNF217'] 60210 12318 LICDLTPNPVL True NCI_RA007_Epitope_Rep4 1196.647495921 1196.64638993586 54.378 2 -0.3547352917040462 0.09203835664643266 0.9438714419765777 ['SVA_F_dup842|chr17:42972299-42974012:+|2.756514949480428|0.1714938602276479|4.01|487.0|31|2|sense', 'SVA_F_dup683|chr12:56075092-56076774:-|1.8546114936796516|0.0829394271016015|4.48|483.0|42|3|sense', 'SVA_F_dup4|chr1:21023240-21024912:+|1.5065420807830687|0.2036143221834308|2.89|484.0|43|3|sense', 'SVA_F_dup394|chr7:73283288-73285309:-|1.385153198310789|0.0859803918566289|4.01|468.0|45|3|sense', 'SVA_D_dup572|chr7:13101975-13103665:+|1.6639664035240398|0.0779356966125725|4.42|449.0|10|1|sense', 'SVA_D_dup132|chr1:226114299-226115980:-|1.3983671137746794|0.0922211982552955|3.92|465.0|30|2|sense', 'SVA_D_dup1026|chr13:30838585-30840641:-|4.257143864425426|0.3514679219565426|3.6|489.0|12|1|sense'] 32228 8728 GFGGDDAPR True NCI_RA007_Epitope_Rep1 890.38824446322 890.38714993586 37.951 2 -0.3547365103990967 0.09203835664643266 0.9438714419765777 ['ENSG00000169067|ENST00000423391|ACTBL2'] 11853 4213 DHNDGLGNAF True NCI_RA007_Epitope_Rep3 1058.44173658806 1058.4406299358602 23.228 2 -0.3547755393937517 0.09203835664643266 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 122217 5666 VGRNASDL True NCI_RA007_Epitope_Rep5 830.4246299719399 830.42352993586 28.482 2 -0.35481001066774803 0.09203835664643266 0.9438714419765777 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 138137 16762 YQLDTGHYL True PC9_epitope_Rep5 1108.5189242796 1108.5178299358602 69.48 2 -0.3548650300414792 0.09203835664643266 0.9438714419765777 ['nc|ENSG00000176095|Q92551-2|IP6K1', 'ENSG00000176095|ENST00000321599|IP6K1'] 14179 3655 DSQPEDQRERL True NCI_RA007_Epitope_Rep5 1371.6378701953097 1371.63622490379 20.052 3 -0.35511151439619737 0.09217749313815188 0.9438714419765777 ['ENSG00000176531|ENST00000292140|PHLDB3', 'nc|ENSG00000176531|Q6NSJ2-2|PHLDB3'] 72772 12900 NAFCKIQPSI True PC9_epitope_Rep4 1119.57466533391 1119.5735699358602 57.498 2 -0.3551405273927637 0.09219184348499243 0.9438714419765777 ['ENSG00000182263|ENST00000333129|FIGN'] 119576 9416 VERLETMRR True PC9_epitope_Rep4 1188.63972520196 1188.63808490379 43.829 3 -0.35514642516623995 0.09219184348499243 0.9438714419765777 ['nc|ENSG00000181031|Q9UNE2-2|RPH3AL', 'ENSG00000181031|ENST00000331302|RPH3AL'] 14504 7295 DTWESLQK True PC9_epitope_Rep6 1005.47672511445 1005.47562993586 37.203 2 -0.3552228375180065 0.0922237860661506 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 22827 7402 EVEEDKENKEY True H1975_Epitope_Rep3 1410.6150690620598 1410.61342490379 33.451 3 -0.3552675004205131 0.0922237860661506 0.9438714419765777 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 27020 18889 FLLPRHHL True PC9_epitope_Rep1 1031.6028691174301 1031.6017699358601 77.442 2 -0.3553008932458692 0.09227169572330805 0.9438714419765777 ['ENST00000328914.4_1_7:4802311-4802611:+|nuORF'] 62497 15202 LLSQPQVSL True PC9_epitope_Rep4 983.56514619603 983.56404993586 66.397 2 -0.35531800473756 0.09227169572330805 0.9438714419765777 ['ENST00000373307.5_1_10:71164777-71168747:-|nuORF'] 41295 19018 IAGVTGFIGL True PC9_epitope_Rep1 946.5487678559 946.54766993586 77.943 2 -0.3553187472254468 0.09227169572330805 0.9438714419765777 ['nc|ENSG00000198513|Q8WXF7-2|ATL1', 'ENSG00000198513|ENST00000358385|ATL1'] 48216 9850 KCMRSLRRW True NCI_RA007_Epitope_Rep4 1234.6539357974598 1234.6528299358602 44.734 2 -0.35532777195549947 0.09228604098865335 0.9438714419765777 ['ACACA|p.I174L|1|0.61|ENSG00000278540|chr17:37283357-37283357|T/G|missense_variant'] 93042 14242 RRRHRGRHL True NCI_RA007_Epitope_Rep1 1242.7394712162998 1242.73783490379 59.435 3 -0.3553289361932281 0.09228604098865335 0.9438714419765777 ['ENST00000543476.5_1_12:21590648-21593357:+|nuORF'] 105327 9203 [Acetylation]-STVHEILC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep1 1127.56449516876 1127.5633899358602 39.798 2 -0.35542251207162856 0.09231635237827188 0.9438714419765777 ['ENSG00000182718|ENST00000451270|ANXA2', 'nc|ENSG00000182718|P07355-2|ANXA2', 'VPS13C-ANXA2|1|fusion', 'nc|ENSG00000231991|A6NMY6|ANXA2P2', 'ENST00000557937.5_1_15:60655071-60678274:-|nuORF', 'ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion', 'ENST00000559725.5_1_15:60656692-60682421:-|nuORF', 'ENST00000558985.5_1_15:60656692-60690187:-|nuORF'] 59631 13135 LGSLAALAAL True PC9_epitope_Rep5 898.5487678558999 898.54766993586 55.527 2 -0.35542351908687475 0.09231635237827188 0.9438714419765777 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'OCA2|p.D486Tfs*13|1|0.34|ENSG00000104044|chr15:27983392-27983392|C/-|frameshift_variant'] 15275 8875 EAGVTDEVL True H1975_Epitope_Rep2 931.44984166027 931.4492949679301 39.106 1 -0.35542732875444427 0.09231635237827188 0.9438714419765777 ['ENSG00000169902|ENST00000304842|TPST1', 'ENSG00000128294|ENST00000338754|TPST2'] 45029 10943 IQLWKDLFFFN True NCI_RA007_Epitope_Rep1 1469.7707222881697 1469.7696299358602 46.559 2 -0.3554511345341893 0.09233231895020141 0.9438714419765777 ['ENST00000394048.9_1_12:56537870-56538023:+|nuORF'] 66532 13196 LSSGHSSYAI True PC9_epitope_Rep1 1020.4876241513199 1020.48652993586 55.622 2 -0.355592478467666 0.09241864555848725 0.9438714419765777 ['nc|ENSG00000211637|A0A075B6H9|IGLV4-69'] 9195 17723 AVPEKLQPLL True PC9_epitope_Rep1 1106.6699456177398 1106.6688499358602 72.969 2 -0.35568693910907717 0.09243298388798987 0.9438714419765777 ['ENSG00000179933|ENST00000319074|C14orf119'] 126371 11554 VPLC[Carbamidomethyl]ILYEK True H1975_Epitope_Rep3 1133.61546779616 1133.6143699358602 49.57 2 -0.3557163689195461 0.09243298388798987 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 58111 10000 LERVNLSA True PC9_epitope_Rep5 900.5028802926399 900.50178993586 43.441 2 -0.3558238994410136 0.0924489472851037 0.9438714419765777 ['ENSG00000114209|ENST00000392750|PDCD10', 'chr3:167704895-167734806|114|24.08|0.2|6.94|-|0|PDCD10,PDCD10|1', 'ENST00000481136.1_1_3:167422617-167437945:-|nuORF'] 13578 8980 DPPSNPVAA True PC9_epitope_Rep2 866.4133965819 866.41228993586 39.896 2 -0.3559005973074284 0.09248087239468825 0.9438714419765777 ['ENSG00000056277|ENST00000370978|ZNF280C'] 125149 9992 VLPSSTNY True PC9_epitope_Rep1 879.43379767331 879.43270993586 43.299 2 -0.3559653740701245 0.09248087239468825 0.9438714419765777 ['nc|ENSG00000114487|Q86VD1-2|MORC1', 'ENSG00000114487|ENST00000232603|MORC1'] 45321 21051 ISCRVFSTLVP True PC9_epitope_Rep1 1220.65872931104 1220.65762993586 85.803 2 -0.35597005104488233 0.09249683410721823 0.9438714419765777 ['chr5:90929313-90965415|333|22.99|0.23|6.64|+|1|TE_info:L1PA2,L1PA2_dup1646,L1,LINE,donor,-,90923631,90929313|None,ADGRV1|76', 'chr5:90822097-90965415|264|32.48|0.18|7.5|+|1|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|80'] 135330 4535 YCRRWRYWEYW True NCI_RA007_Epitope_Rep2 1765.7936000744096 1765.7925099358602 22.268 2 -0.3560909605136181 0.09252712851087778 0.9438714419765777 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 72718 11671 MYQEHINEI True PC9_epitope_Rep2 1175.52810906431 1175.5270099358602 50.223 2 -0.3561052217704012 0.09252712851087778 0.9438714419765777 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'POLE|p.D1405N|1|0.22|ENSG00000177084|chr12:132643914-132643914|C/T|missense_variant'] 32799 8644 GIEIHVNVE True H1975_Epitope_Rep1 1008.52400966004 1008.52290993586 38.178 2 -0.3561148010658692 0.09252712851087778 0.9438714419765777 ['ENSG00000243156|ENST00000441493|MICAL3', 'nc|ENSG00000243156|Q7RTP6-2|MICAL3', 'nc|ENSG00000243156|Q7RTP6-4|MICAL3', 'nc|ENSG00000243156|Q7RTP6-3|MICAL3', 'nc|ENSG00000243156|Q7RTP6-5|MICAL3'] 60518 20887 LIPDIDLKL True PC9_epitope_Rep2 1038.63249747986 1038.6314099358601 85.785 2 -0.35626983151941594 0.09261180774168587 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 134134 7147 WRENIREQQK True H1975_Epitope_Rep1 1385.71639529953 1385.71474490379 32.515 3 -0.35627143305487513 0.09261180774168587 0.9438714419765777 ['nc|ENSG00000186716|P11274-2|BCR', 'ENSG00000186716|ENST00000305877|BCR', 'ENST00000487968.5_1_22:23626151-23631864:+|nuORF'] 15070 8212 EAAVAAVAV True H1975_Epitope_Rep2 799.44396843419 799.44286993586 36.54 2 -0.356276563386665 0.09262776546727164 0.9438714419765777 ['ENSG00000066735|ENST00000423312|KIF26A', 'KIF26A|p.P954Hfs*31|1|0.2|ENSG00000066735|chr14:104175645-104175645|C/-|frameshift_variant'] 110569 11119 TISDLLNDP True H1975_Epitope_Rep2 986.49204082542 986.49094993586 47.804 2 -0.3562994400324868 0.09264372263158821 0.9438714419765777 ['EDARADD|p.Q119P|1|0.48|ENSG00000186197|chr1:236482357-236482357|A/C|missense_variant'] 6462 9112 APTAEGLAA True PC9_epitope_Rep2 799.4075829254699 799.40648993586 40.39 2 -0.356398579740821 0.09267726505346088 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 126410 18514 VPLLGGLL True H1975_Epitope_Rep3 780.5109257952 780.51037496793 77.645 1 -0.35644399325568504 0.09269322078607227 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant'] 11856 4143 DHNDGLGNAF True NCI_RA007_Epitope_Rep5 1058.44173658806 1058.4406299358602 22.439 2 -0.35656309654236445 0.09270265517847723 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 123707 12826 VIPPSSGLP True PC9_epitope_Rep1 865.49091862661 865.48982993586 54.21 2 -0.35660377496189083 0.09270265517847723 0.9438714419765777 ['nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 79132 11578 PGALDGGEP True PC9_epitope_Rep1 811.37119741675 811.37010993586 49.413 2 -0.35660401068057285 0.09270265517847723 0.9438714419765777 ['nc|ENSG00000022567|Q5BKX6-2|SLC45A4', 'nc|ENSG00000022567|Q5BKX6|SLC45A4', 'nc|ENSG00000022567|Q5BKX6-3|SLC45A4', 'ENSG00000022567|ENST00000517878|SLC45A4'] 679 13717 AAVDAGMAM True PC9_epitope_Rep5 835.35681030591 835.35570993586 57.789 2 -0.3566496197967079 0.09270265517847723 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 18853 11058 ELEGNALEELR True NCI_RA007_Epitope_Rep1 1271.6357449369898 1271.6346499358601 47.008 2 -0.35665719568151416 0.09270265517847723 0.9438714419765777 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 101533 6176 SPAPPGPQA True PC9_epitope_Rep3 820.40791727864 820.40682993586 28.798 2 -0.35671833868598435 0.09271860878127693 0.9438714419765777 ['ENSG00000104881|ENST00000360957|PPP1R13L', 'ENST00000585905.1_1_19:45898523-45909561:-|nuORF'] 47717 12840 IYQDVTLKW True NCI_RA007_Epitope_Rep4 1164.6179100448799 1164.6168099358601 56.471 2 -0.35673764439972966 0.0927505143037997 0.9438714419765777 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'BBS9|p.V734*|1|0.27|ENSG00000122507|chr7:33505546-33505546|G/-|frameshift_variant', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9', 'nc|ENSG00000122507|Q3SYG4-5|BBS9'] 5713 6378 APASLTSA True PC9_epitope_Rep4 716.3704691407601 716.36992496793 31.619 1 -0.3567547848628303 0.0927505143037997 0.9438714419765777 ['ENSG00000167978|ENST00000301740|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF'] 85750 19330 QLVEGLHYL True PC9_epitope_Rep4 1070.5760452329 1070.57494993586 82.46 2 -0.35679789078882973 0.09276320416344327 0.9438714419765777 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN'] 100721 8048 SLRGTGVL True PC9_epitope_Rep5 801.4708518883699 801.46974993586 35.895 2 -0.3567982072142194 0.09276320416344327 0.9438714419765777 ['ENSG00000163395|ENST00000335211|IGFN1'] 28974 9698 FTGHLLFLA True NCI_RA007_Epitope_Rep5 1017.5647522732098 1017.56364993586 43.941 2 -0.3568281756134751 0.09276320416344327 0.9438714419765777 ['ENSG00000171451|ENST00000310045|DSEL'] 66923 12613 LSYFRYMRIYR True H1975_Epitope_Rep1 1566.8129385366599 1566.8118499358602 53.565 2 -0.3568980999962269 0.09280942334739803 0.9438714419765777 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 103273 11807 SQTGFVVL True H1975_Epitope_Rep3 849.45961849833 849.4590749679301 50.562 1 -0.3569062430247556 0.09280942334739803 0.9438714419765777 ['ENSG00000133048|ENST00000255409|CHI3L1'] 60055 7661 LHSGVDEL True PC9_epitope_Rep1 868.42904664604 868.4279499358599 34.291 2 -0.3569105797901191 0.09280942334739803 0.9438714419765777 ['ENST00000394430.5_1_11:64511463-64511499:-|nuORF', 'nc|ENSG00000068831|Q7LDG7-2|RASGRP2'] 60307 10971 LIEWRQRK True NCI_RA007_Epitope_Rep1 1127.65636124227 1127.6552699358601 46.668 2 -0.3569106590028662 0.09280942334739803 0.9438714419765777 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1'] 79872 8452 PIKNQQSV True PC9_epitope_Rep4 912.50288029264 912.50178993586 39.975 2 -0.35695704486140195 0.0928221085385792 0.9438714419765777 ['ENSG00000181378|ENST00000341552|CFAP65'] 37918 10739 HEDVNVGSI True PC9_epitope_Rep4 968.45632402304 968.45522993586 49.064 2 -0.3569626528464142 0.0928221085385792 0.9438714419765777 ['ENSG00000133302|ENST00000265140|SLF1'] 64219 9837 LQIVRDTL True NCI_RA007_Epitope_Rep5 956.5654805492 956.56438993586 44.482 2 -0.3569708681040069 0.0928221085385792 0.9438714419765777 ['nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-2|SKOR1'] 131655 15231 VWGFRHDRSL True PC9_epitope_Rep5 1271.65233849099 1271.65069490379 63.595 3 -0.3570109080648802 0.09285563603122143 0.9438714419765777 ['ENSG00000269556|ENST00000600449|TMEM185A', 'ENSG00000226479|ENST00000426077|TMEM185B', 'ENST00000517359.1_1_X:148690238-148690502:-|nuORF', 'ENST00000502900.2_1_X:148688442-148693021:-|nuORF'] 65476 17712 LSFHTGDVL True PC9_epitope_Rep2 987.5025459394699 987.50144993586 73.411 2 -0.35705981422969774 0.0928715830183704 0.9438714419765777 ['ENSG00000100351|ENST00000344138|GRAP2', 'ENST00000461082.1_1_22:40343110-40343266:+|nuORF'] 74728 22663 NLLDSFHCWQL True PC9_epitope_Rep2 1374.63905649562 1374.6379499358602 92.669 2 -0.35709804876814943 0.09290510846253912 0.9438714419765777 ['ENST00000498648.5_1_2:202339356-202340375:+|nuORF'] 84488 21623 QGPLLLPGL True PC9_epitope_Rep5 906.5538532363399 906.55274993586 88.213 2 -0.357116733882729 0.09291778726994673 0.9438714419765777 ['nc|ENSG00000131355|Q9BY15-2|ADGRE3', 'ADGRE3|p.Q577Rfs*41|1|0.24|ENSG00000131355|chr19:14630122-14630122|G/-|frameshift_variant', 'ENSG00000131355|ENST00000253673|ADGRE3', 'nc|ENSG00000131355|Q9BY15-3|ADGRE3'] 5536 6387 ANETENDIKV True PC9_epitope_Rep2 1131.54078192299 1131.53968993586 29.974 2 -0.3571601611035994 0.09291778726994673 0.9438714419765777 ['ENSG00000175820|ENST00000322527|CCDC168'] 60459 19038 LILKPVTSP True PC9_epitope_Rep3 966.61136811246 966.61026993586 78.451 2 -0.35716218905250074 0.09291778726994673 0.9438714419765777 ['ENSG00000154175|ENST00000471714|ABI3BP'] 134929 8452 YAEIDICPA True NCI_RA007_Epitope_Rep2 993.4477334852899 993.44662993586 37.519 2 -0.3572802979551531 0.0929337317630515 0.9438714419765777 ['nc|ENSG00000108100|Q8ND76-3|CCNY', 'nc|ENSG00000108100|Q8ND76-2|CCNY', 'ENSG00000108100|ENST00000374704|CCNY'] 84003 5580 QEMSRC[Carbamidomethyl]KT True H1975_Epitope_Rep3 1038.4586498849299 1038.45754993586 26.504 2 -0.35738175295953223 0.09298156187931732 0.9438714419765777 ['nc|ENSG00000139973|Q17RD7-3|SYT16', 'nc|ENSG00000139973|Q17RD7-2|SYT16', 'ENSG00000139973|ENST00000683842|SYT16'] 73128 8486 NEALMRSEET True NCI_RA007_Epitope_Rep1 1178.52375195986 1178.52264993586 37.009 2 -0.3574012877996403 0.09298156187931732 0.9438714419765777 ['nc|ENSG00000186575|P35240-2|NF2', 'nc|ENSG00000186575|P35240-4|NF2', 'nc|ENSG00000186575|P35240-6|NF2', 'nc|ENSG00000186575|P35240-5|NF2', 'nc|ENSG00000186575|P35240-8|NF2', 'nc|ENSG00000186575|P35240-3|NF2', 'ENSG00000186575|ENST00000338641|NF2', 'ZNRF3-NF2|8|fusion', 'ZNRF3-NF2|5|fusion', 'ZNRF3-NF2|6|fusion', 'ZNRF3-NF2|4|fusion', 'ZNRF3-NF2|1|fusion', 'ZNRF3-NF2|2|fusion'] 63904 19567 LPVSPSLLPV True PC9_epitope_Rep4 1020.62193279616 1020.62082993586 83.387 2 -0.3574101358200745 0.09298156187931732 0.9438714419765777 ['ENST00000476040.6_1_1:110210707-110212286:+|nuORF'] 93207 22666 RRRRRLWRWWW True PC9_epitope_Rep5 1812.0185466018697 1812.0174499358602 92.187 2 -0.3574519540285286 0.092995869584322 0.9438714419765777 ['chr12:54283228-54283827|502|30.68|0.0|21.55|+|1|HNRNPA1,HNRNPA1|2'] 96726 8757 SEQFGSPVA True H1975_Epitope_Rep3 920.4239612655998 920.4234149679301 38.689 1 -0.3574618436300757 0.092995869584322 0.9438714419765777 ['ENSG00000127804|ENST00000263092|METTL16'] 86306 12045 QQGPVGVNV True PC9_epitope_Rep2 896.4715801643599 896.4710349679301 51.647 1 -0.3575292178250276 0.09301017628345959 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 22725 6309 ETYFQCTICKK True NCI_RA007_Epitope_Rep1 1362.63119423386 1362.63008993586 28.566 2 -0.35756371380575575 0.09301017628345959 0.9438714419765777 ['nc|ENSG00000154957|P17022-2|ZNF18', 'ENSG00000154957|ENST00000580306|ZNF18'] 94729 13623 RYLEVMRKL True PC9_epitope_Rep5 1206.6906981456598 1206.68905490379 57.424 3 -0.35758425277034456 0.09302611691096348 0.9438714419765777 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 113 10907 AAATPVRR True PC9_epitope_Rep5 840.49298431528 840.49188993586 46.941 2 -0.3576222343188073 0.0930596319794724 0.9438714419765777 ['ENST00000322313.8_1_2:128458821-128459556:-|nuORF'] 119533 10268 VEQWPYRAVA True H1975_Epitope_Rep2 1217.61930702721 1217.61820993586 44.503 2 -0.35774668602943077 0.09312665858245021 0.9438714419765777 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 79785 7254 PHYPTPPAP True PC9_epitope_Rep2 975.4814165720699 975.48030993586 33.29 2 -0.35779092518411326 0.09312665858245021 0.9438714419765777 ['ENSG00000271503|ENST00000651122|CCL5'] 115166 16093 TVAGKSILTNI True PC9_epitope_Rep3 1115.65502382959 1115.65392993586 67.051 2 -0.35791533282456417 0.09317610670790644 0.9438714419765777 ['ENSG00000198691|ENST00000370225|ABCA4'] 7292 4812 ARPSPQVPA True PC9_epitope_Rep3 921.50321464581 921.50210993586 23.604 2 -0.35792400027038246 0.09317610670790644 0.9438714419765777 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'ROBO4|p.I751Sfs*43|2|0.13|ENSG00000154133|chr11:124887162-124887162|G/-|frameshift_variant', 'ROBO4|p.L856Cfs*18|2|0.14|ENSG00000154133|chr11:124886692-124886693|AG/T|frameshift_variant', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000532216.5_1_11:124756354-124763822:-|nuORF', 'ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 111897 3549 TLRRLLNEL True NCI_RA007_Epitope_Rep4 1126.6822416369398 1126.68058490379 19.664 3 -0.3579516190346848 0.09319204273864755 0.9438714419765777 ['ENSG00000117501|ENST00000367759|MROH9'] 30546 20469 GAISPFTPEF True PC9_epitope_Rep3 1064.51786165044 1064.51676993586 83.992 2 -0.35797032675604346 0.09320470240919394 0.9438714419765777 ['ENSG00000196914|ENST00000397843|ARHGEF12', 'nc|ENSG00000196914|Q9NZN5-2|ARHGEF12'] 57587 6521 LELGVAKK True PC9_epitope_Rep2 856.5382031721999 856.53710993586 30.499 2 -0.35808579750748354 0.09320470240919394 0.9438714419765777 ['ENSG00000185313|ENST00000449082|SCN10A'] 73501 10769 NFEDVAFDEK True NCI_RA007_Epitope_Rep2 1212.5298828861198 1212.52878993586 46.491 2 -0.35811983561492505 0.09320470240919394 0.9438714419765777 ['ENSG00000185624|ENST00000331483|P4HB', 'NPLOC4-P4HB|1|fusion'] 94025 6000 RVRCAIIPSD True NCI_RA007_Epitope_Rep5 1128.6073624445198 1128.60571490379 29.762 3 -0.3581532897017592 0.09323820903915091 0.9438714419765777 ['nc|ENSG00000172530|Q8N9N5-3|BANP', 'nc|ENSG00000172530|Q8N9N5-6|BANP', 'nc|ENSG00000172530|Q8N9N5-2|BANP', 'nc|ENSG00000172530|Q8N9N5-7|BANP', 'nc|ENSG00000172530|Q8N9N5-4|BANP', 'nc|ENSG00000172530|Q8N9N5-5|BANP', 'nc|ENSG00000172530|Q8N9N5|BANP', 'ENSG00000172530|ENST00000682872|BANP'] 139847 9832 YVDNNRSNWL True NCI_RA007_Epitope_Rep4 1279.5945488313498 1279.59289490379 44.667 3 -0.3584125115560714 0.09332443023071922 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant', 'RYR3|p.V3486Lfs*23|1|0.16|ENSG00000198838|chr15:33813536-33813560|GTGGTGGCCTGTTTCAGGATGGCCC/-|frameshift_variant'] 34741 8279 GQNSLTLQP True NCI_RA007_Epitope_Rep4 956.49270953176 956.49160993586 38.654 2 -0.35849177180251846 0.09333872186396303 0.9438714419765777 ['ENSG00000101544|ENST00000262198|ADNP2'] 63645 21550 LPNMAEFDTI True PC9_epitope_Rep3 1149.53761111885 1149.53650993586 88.187 2 -0.35853614046841054 0.09333872186396303 0.9438714419765777 ['nc|ENSG00000204116|Q5VXU3-2|CHIC1', 'ENSG00000204116|ENST00000373502|CHIC1'] 78565 7040 PDQELAPASEP True NCI_RA007_Epitope_Rep2 1152.5298828861198 1152.52878993586 32.008 2 -0.3586046282245352 0.0933530124927521 0.9438714419765777 ['FAM21A-LURAP1L|1|fusion', 'nc|ENSG00000099290|Q641Q2-2|WASHC2A', 'ENSG00000099290|ENST00000282633|WASHC2A'] 81620 11490 PRQILLGAS True PC9_epitope_Rep1 953.5658149023699 953.56470993586 49.077 2 -0.35861803198482906 0.0933530124927521 0.9438714419765777 ['VWA5A|p.P611Q|2|0.12|ENSG00000110002|chr11:124137221-124137221|C/A|missense_variant'] 96218 12486 SEENGSKGMDP True H1975_Epitope_Rep2 1149.46081735013 1149.4597299358602 53.118 2 -0.35867020010429257 0.09338159073738954 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 63021 15645 LNHEDLVL True PC9_epitope_Rep2 951.5025459394699 951.50144993586 65.453 2 -0.35871068354570107 0.09338159073738954 0.9438714419765777 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES', 'ENST00000496379.5_1_15:91433070-91435551:+|nuORF', 'ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 123775 10377 VISPPLSVIVP True H1975_Epitope_Rep2 1119.69034670915 1119.68924993586 44.926 2 -0.3587291511971307 0.09338159073738954 0.9438714419765777 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2'] 86252 6318 QPYRYTVKA True PC9_epitope_Rep1 1124.59784330664 1124.5961849037901 29.114 3 -0.3587431969648273 0.09338159073738954 0.9438714419765777 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 857 7446 ADIETDPGI True H1975_Epitope_Rep2 929.4341915961298 929.43308993586 33.586 2 -0.35883451664623506 0.09341180604356993 0.9438714419765777 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000485420.5_1_X:51636757-51640983:+|nuORF', 'ENST00000494718.5_1_X:51637400-51640272:+|nuORF'] 29854 16370 FVWDMCNYVVP True H1975_Epitope_Rep1 1371.59916582959 1371.5980699358602 68.326 2 -0.3588531383999278 0.09341180604356993 0.9438714419765777 ['ENSG00000165029|ENST00000374736|ABCA1'] 68563 14723 LTWRVVSP True PC9_epitope_Rep3 956.5443511817998 956.54324993586 61.771 2 -0.358854006318323 0.09341180604356993 0.9438714419765777 ['ENSG00000164363|ENST00000324642|SLC6A18'] 57402 19855 LEHYILEL True PC9_epitope_Rep2 1028.5542471591598 1028.5531499358601 81.764 2 -0.3589065832279279 0.09344530138261802 0.9438714419765777 ['nc|ENSG00000143552|Q5VU65-2|NUP210L', 'ENSG00000143552|ENST00000368559|NUP210L'] 70521 18487 LYTEKFEEF True PC9_epitope_Rep5 1204.5652057656796 1204.5641099358602 76.133 2 -0.35893545808691224 0.09349143610013175 0.9438714419765777 ['ENSG00000084652|ENST00000373610|TXLNA'] 2955 14447 AFGYYGPLR True PC9_epitope_Rep6 1042.5236157372199 1042.5225099358602 67.461 2 -0.35893941656196166 0.09349143610013175 0.9438714419765777 ['nc|ENSG00000112081|P84103-2|SRSF3', 'ENSG00000112081|ENST00000373715|SRSF3'] 45361 14804 ISDHYPVEV True PC9_epitope_Rep2 1057.50802524273 1057.5069299358602 62.208 2 -0.35895533980185507 0.09349143610013175 0.9438714419765777 ['ENSG00000013563|ENST00000369807|DNASE1L1', 'ENSG00000213918|ENST00000246949|DNASE1'] 100418 6807 SLPAGQTEPQP True NCI_RA007_Epitope_Rep3 1123.55095268387 1123.54984993586 33.88 2 -0.35896663452373817 0.09349143610013175 0.9438714419765777 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11', 'ENST00000487682.5_1_1:156905794-156908468:-|nuORF'] 54874 17927 LAGIRRSGLS True PC9_epitope_Rep5 1028.60907669668 1028.6079699358602 73.973 2 -0.35904592940551316 0.09353592130686808 0.9438714419765777 ['ENST00000264033.5_1_11:119148988-119149257:+|nuORF'] 124228 16978 VLATGSGIVI True PC9_epitope_Rep5 928.5593325395998 928.55822993586 70.324 2 -0.3590478439970588 0.09353592130686808 0.9438714419765777 ['nc|ENSG00000167695|Q8TBR7-1|TLCD3A', 'ENST00000570699.1_1_17:636236-644807:+|nuORF', 'ENSG00000167695|ENST00000308278|TLCD3A'] 56155 17574 LDNIELYWNSY True H1975_Epitope_Rep3 1428.6561460284 1428.65504993586 73.404 2 -0.35905444698292727 0.09353592130686808 0.9438714419765777 ['nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000556716.5_1_14:21486897-21488105:-|nuORF', 'ENST00000554277.5_1_14:21487301-21489989:-|nuORF', 'nc|ENSG00000165795|Q9UN36-5|NDRG2', 'nc|ENSG00000165795|Q9UN36-3|NDRG2', 'ENST00000557416.5_1_14:21486655-21488105:-|nuORF'] 28290 12842 FRWMRLRIRRM True NCI_RA007_Epitope_Rep1 1619.9129444447897 1619.9118499358601 53.943 2 -0.3590727290340123 0.09353592130686808 0.9438714419765777 ['ENSG00000152127|ENST00000281923|MGAT5'] 46832 8156 IVEMIHFK True NCI_RA007_Epitope_Rep2 1015.55247333735 1015.55136993586 36.36 2 -0.3590798898959349 0.09353592130686808 0.9438714419765777 ['ENSG00000113739|ENST00000265087|STC2'] 33727 11162 GLRPQLVA True PC9_epitope_Rep6 852.5181364339599 852.51702993586 53.887 2 -0.3591085510334227 0.09355184345962657 0.9438714419765777 ['ENST00000543196.6_1_12:51773598-51777285:-|nuORF', 'ENST00000356317.7_1_12:51773598-51784704:-|nuORF'] 12977 13126 DLPQLEIRNSL True H1975_Epitope_Rep3 1296.70376492716 1296.70266993586 55.736 2 -0.35913675101763654 0.09356447816770296 0.9438714419765777 ['PKDREJ|p.P288L|1|0.22|ENSG00000130943|chr22:46262460-46262460|G/A|missense_variant'] 7033 13915 AQSGTIMAV True PC9_epitope_Rep3 876.43750315476 876.4369549679301 58.605 1 -0.35914472855426094 0.09356447816770296 0.9438714419765777 ['nc|ENSG00000034152|P46734-2|MAP2K3', 'ENSG00000034152|ENST00000342679|MAP2K3', 'nc|ENSG00000034152|P46734-3|MAP2K3'] 29343 12810 FVDWC[Carbamidomethyl]PTGFK True H1975_Epitope_Rep1 1255.5695802328999 1255.56848993586 54.338 2 -0.3591477999925852 0.09356447816770296 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000178462|ENST00000380419|TUBAL3', 'nc|ENSG00000178462|A6NHL2-2|TUBAL3', 'TUBAL3|p.V360M|1|0.41|ENSG00000178462|chr10:5393780-5393780|C/T|missense_variant', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8'] 35442 6012 GTEALALAN True NCI_RA007_Epitope_Rep5 858.44469671018 858.44358993586 29.809 2 -0.35916310674187857 0.09357382461932946 0.9438714419765777 ['ENST00000531958.5_1_11:67183879-67184254:+|nuORF'] 19465 10143 ELQCLALAPQ True H1975_Epitope_Rep3 1084.5586809165998 1084.55758993586 44.059 2 -0.3591686051962578 0.09357382461932946 0.9438714419765777 ['ENST00000464395.1_1_10:3185767-3189991:-|nuORF'] 43678 5261 IINGKVGG True PC9_epitope_Rep3 756.4493881677998 756.44828993586 25.316 2 -0.35917376334281936 0.09357382461932946 0.9438714419765777 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 140752 22498 YYQSNEFI True PC9_epitope_Rep1 1062.46582607758 1062.46472993586 91.338 2 -0.359196058555694 0.09357382461932946 0.9438714419765777 ['PTPRZ1|p.L2100Pfs*15|1|0.25|ENSG00000106278|chr7:122053952-122053953|-/T|frameshift_variant', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'nc|ENSG00000106278|P23471-3|PTPRZ1'] 27240 9398 FLVPDHTIK True NCI_RA007_Epitope_Rep2 1068.59678067748 1068.59568993586 41.165 2 -0.35920706106967126 0.09357382461932946 0.9438714419765777 ['ENSG00000141034|ENST00000268719|GID4'] 120753 20147 VGAVTLGVL True PC9_epitope_Rep4 827.5116540711899 827.51110496793 85.632 1 -0.3592249351981407 0.09358974358974359 0.9438714419765777 ['ENSG00000214511|ENST00000695931|HIGD1C'] 62195 19076 LLPPEESSP True PC9_epitope_Rep2 967.48622716899 967.48512993586 78.741 2 -0.3592882052913578 0.0936056620010186 0.9438714419765777 ['ENST00000408959.2_1_3:48956197-48956359:-|nuORF'] 29028 22538 FTLFTINV True PC9_epitope_Rep2 953.5222187548899 953.52112993586 92.185 2 -0.3593300081478843 0.09361335979068257 0.9438714419765777 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A'] 137399 17302 YLLLGLLLTCL True H1975_Epitope_Rep3 1233.74066802985 1233.73903490379 72.204 3 -0.3593883180127301 0.09361335979068257 0.9438714419765777 ['ENSG00000137101|ENST00000259633|CD72'] 99925 24532 SLIEDLILL True PC9_epitope_Rep2 1027.6165130625498 1027.61540993586 99.982 2 -0.35942907719195927 0.09361335979068257 0.9438714419765777 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF', 'ENST00000470510.5_1_1:245912867-246021878:-|nuORF', 'ENST00000366516.5_1_1:245912867-246093251:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-2|SMYD3', 'ENST00000366517.5_1_1:245912867-246116553:-|nuORF', 'nc|ENSG00000185420|Q9H7B4-3|SMYD3', 'ENSG00000185420|ENST00000490107|SMYD3'] 2912 5474 AFDAGERP True NCI_RA007_Epitope_Rep1 861.39808087093 861.39698993586 25.363 2 -0.35951160026185175 0.09361335979068257 0.9438714419765777 ['nc|ENSG00000163219|P42331-5|ARHGAP25', 'nc|ENSG00000163219|P42331-3|ARHGAP25', 'nc|ENSG00000163219|P42331-6|ARHGAP25', 'nc|ENSG00000163219|P42331|ARHGAP25', 'ENSG00000163219|ENST00000409202|ARHGAP25', 'ENST00000488795.1_1_2:69034406-69043495:+|nuORF', 'ENST00000473986.1_1_2:69009370-69040541:+|nuORF', 'nc|ENSG00000163219|P42331-2|ARHGAP25'] 67732 13082 LTGNSITKSP True PC9_epitope_Rep2 1016.55022440788 1016.54912993586 55.597 2 -0.359526829873353 0.09361335979068257 0.9438714419765777 ['DENND4C|p.P733L|1|0.28|ENSG00000137145|chr9:19328107-19328107|C/T|missense_variant'] 59876 9611 LHHCWVYYQRQ True H1975_Epitope_Rep1 1531.71428712455 1531.71318993586 41.894 2 -0.35953736340843756 0.09361335979068257 0.9438714419765777 ['ENST00000433818.6_1_11:77629258-77692594:-|nuORF'] 82151 15871 PTDWQKKILI True PC9_epitope_Rep4 1240.7179584393198 1240.7163149037901 68.978 3 -0.3595686147182198 0.09364354697102721 0.9438714419765777 ['ENSG00000114023|ENST00000477892|FAM162A'] 55685 5947 LDCAHTAASF True PC9_epitope_Rep6 1034.44913046762 1034.4480299358602 31.173 2 -0.3595810620028894 0.09364354697102721 0.9438714419765777 ['ENST00000336812.4_1_4:24586045-24586090:-|nuORF'] 7290 4424 ARPSPQVPA True PC9_epitope_Rep1 921.50321464581 921.50210993586 21.901 2 -0.3595900863585284 0.09364354697102721 0.9438714419765777 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'ROBO4|p.I751Sfs*43|2|0.13|ENSG00000154133|chr11:124887162-124887162|G/-|frameshift_variant', 'ROBO4|p.L856Cfs*18|2|0.14|ENSG00000154133|chr11:124886692-124886693|AG/T|frameshift_variant', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000532216.5_1_11:124756354-124763822:-|nuORF', 'ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 43005 11222 IGETSNRSRDR True PC9_epitope_Rep3 1289.64362428209 1289.64196490379 48.174 3 -0.35963199721072653 0.09367702059665327 0.9438714419765777 ['nc|ENSG00000100461|Q86U06-4|RBM23', 'nc|ENSG00000100461|Q86U06-2|RBM23', 'ENST00000556687.5_1_14:23375339-23380602:-|nuORF'] 16237 13360 EEGMRREIFK True PC9_epitope_Rep1 1293.6499555324897 1293.6488499358602 56.249 2 -0.35965709391372425 0.093692934400899 0.9438714419765777 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77'] 52643 7010 KQEVHMREKCF True NCI_RA007_Epitope_Rep5 1433.69077479865 1433.6891249037901 33.643 3 -0.3596950503520922 0.09370720230361344 0.9438714419765777 ['ZNF765|p.S214C|1|0.36|ENSG00000196417|chr19:53408196-53408196|C/G|missense_variant'] 135900 9232 YESSTASALVA True NCI_RA007_Epitope_Rep5 1097.52406922969 1097.52347496793 42.16 1 -0.35979757411659785 0.09370720230361344 0.9438714419765777 ['ENSG00000110700|ENST00000525634|RPS13', 'ENST00000526895.5_1_11:17095982-17099246:-|nuORF', 'ENST00000531908.5_1_11:17095982-17097186:-|nuORF'] 70278 18109 LYPDHFHLL True PC9_epitope_Rep2 1153.59202965021 1153.5903749037902 74.959 3 -0.35988582699572724 0.09372146920429805 0.9438714419765777 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000487483.6_1_19:46886892-46890886:+|nuORF', 'ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 28681 13668 FSSTHFTP True PC9_epitope_Rep1 922.4184819623399 922.41738993586 57.428 2 -0.3598886987445512 0.09372146920429805 0.9438714419765777 ['ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 102165 25222 SPRRRIILDLL True PC9_epitope_Rep2 1350.8459529170998 1350.84484993586 102.68 2 -0.3599234585457323 0.09373738083115332 0.9438714419765777 ['MCF2L2|p.R625L|2|0.12|ENSG00000053524|chr3:183231006-183231006|C/A|missense_variant'] 95739 14838 SCDKSICTLQI True H1975_Epitope_Rep2 1209.57334500457 1209.57224993586 62.232 2 -0.3599884246752144 0.09377084869553004 0.9438714419765777 ['ENSG00000165023|ENST00000375765|DIRAS2'] 134306 12545 WRVNIQRKRRQ True NCI_RA007_Epitope_Rep2 1538.90184508378 1538.90020490379 53.411 3 -0.3601206592745126 0.09380102175172486 0.9438714419765777 ['ENSG00000188227|ENST00000627814|ZNF793', 'nc|ENSG00000188227|Q6ZN11-2|ZNF793'] 99686 11730 SLGEHYNSV True PC9_epitope_Rep2 1004.45632402304 1004.45522993586 50.452 2 -0.3601400990204059 0.09380102175172486 0.9438714419765777 ['ENSG00000189401|ENST00000338352|OTUD6A'] 41639 15092 IDIEKQEKHIK True H1975_Epitope_Rep1 1379.7772642205898 1379.77616993586 63.305 2 -0.3601451597517768 0.09380102175172486 0.9438714419765777 ['nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENSG00000101745|ENST00000262126|ANKRD12', 'ANKRD12|p.I828Rfs*5|1|0.2|ENSG00000101745|chr18:9255747-9255751|AAATT/-|frameshift_variant'] 16189 7162 EEEYQRVRERI True NCI_RA007_Epitope_Rep1 1505.7586540343298 1505.7570149037902 31.848 3 -0.36016732176542465 0.09381363668281721 0.9438714419765777 ['ENSG00000179912|ENST00000402412|R3HDM2', 'ENST00000547019.1_1_12:57677830-57689202:-|nuORF', 'ARPP21|p.G455Afs*37|1|0.36|ENSG00000172995|chr3:35729437-35729437|G/-|frameshift_variant', 'nc|ENSG00000172995|Q9UBL0|ARPP21', 'ENSG00000172995|ENST00000684406|ARPP21'] 54678 11555 LAEAALELREE True PC9_epitope_Rep1 1242.6455813446998 1242.64448993586 49.325 2 -0.36017565141797153 0.09381363668281721 0.9438714419765777 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 103558 6855 SRDEFTNTC True PC9_epitope_Rep5 1071.4291232990302 1071.4280299358602 31.338 2 -0.36022255331828584 0.09381363668281721 0.9438714419765777 ['ENSG00000169504|ENST00000374379|CLIC4'] 22776 8740 EVDECHMDP True H1975_Epitope_Rep2 1073.3793962252898 1073.37828993586 38.58 2 -0.36037709275067153 0.0938295444571228 0.9438714419765777 ['ENSG00000171094|ENST00000389048|ALK'] 62145 18755 LLPEHSLVP True PC9_epitope_Rep4 1003.57023157647 1003.56912993586 80.223 2 -0.36050628815264435 0.09386300600358108 0.9438714419765777 ['ENSG00000188011|ENST00000343216|RTP5'] 89922 13856 RFVEKYTEL True PC9_epitope_Rep1 1183.62372370131 1183.62208490379 58.137 3 -0.3606135218239488 0.09391402039777415 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 101157 10703 SLVQDTKL True PC9_epitope_Rep4 902.50729696674 902.50618993586 48.921 2 -0.360686572297116 0.09392168220034051 0.9438714419765777 ['ENSG00000171451|ENST00000310045|DSEL'] 135878 21920 YESDFKPYLY True NCI_RA007_Epitope_Rep2 1323.60231955039 1323.6012299358601 90.887 2 -0.3606922619106596 0.09392168220034051 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 111342 18350 TLIEGTSLTF True PC9_epitope_Rep1 1080.57029114612 1080.56918993586 75.372 2 -0.36072077147037906 0.09392168220034051 0.9438714419765777 ['ENSG00000153294|ENST00000283303|ADGRF4'] 65485 10837 LSFLFQLSF True PC9_epitope_Rep3 1100.5906326678798 1100.5895299358601 46.656 2 -0.36073110493392174 0.09392168220034051 0.9438714419765777 ['nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF', 'ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 46265 16242 ITDVIIGFQ True NCI_RA007_Epitope_Rep1 1004.5542471591598 1004.5536749679301 67.285 1 -0.3607792693782906 0.09392168220034051 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 92461 14536 RQWRRRRRPQQ True NCI_RA007_Epitope_Rep2 1621.92504013985 1621.92394993586 61.205 2 -0.3607792852216756 0.09392168220034051 0.9438714419765777 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 66238 6813 LSPVHPSPPA True H1975_Epitope_Rep2 1000.5341804209198 1000.53308993586 31.125 2 -0.3607930505134712 0.0939309909087718 0.9438714419765777 ['ENST00000355415.6_1_19:3544204-3544516:-|nuORF'] 140469 8472 YYICFDTFTEY True H1975_Epitope_Rep2 1463.5955199177897 1463.59442993586 37.539 2 -0.36079744378556206 0.0939309909087718 0.9438714419765777 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1', 'ENST00000588953.1_1_18:60506025-60506217:+|nuORF'] 29390 9888 FVETVEADP True H1975_Epitope_Rep1 1005.4654917244098 1005.46438993586 42.967 2 -0.36092557211557513 0.0939309909087718 0.9438714419765777 ['ENST00000489245.5_1_3:183211997-183273441:-|nuORF', 'ENSG00000172578|ENST00000341319|KLHL6'] 59706 15389 LGTQPLPAQ True PC9_epitope_Rep3 923.5076313199099 923.50708496793 64.349 1 -0.36095605990992236 0.0939309909087718 0.9438714419765777 ['ENST00000471629.1_1_20:43353203-43355945:+|nuORF', 'ENSG00000064205|ENST00000190983|CCN5'] 39329 3523 HLSHFGIDMLK True NCI_RA007_Epitope_Rep2 1296.66487732064 1296.66322490379 18.353 3 -0.3609763978950103 0.0939309909087718 0.9438714419765777 ['ENST00000535080.1_1_12:6966027-6967782:+|nuORF', 'ENST00000537267.5_1_12:6966716-6975238:+|nuORF', 'nc|ENSG00000111667|P45974-2|USP5', 'ENSG00000111667|ENST00000229268|USP5'] 138176 8006 YQNTIVAGSL True PC9_epitope_Rep4 1064.5502244078798 1064.54912993586 38.245 2 -0.3610165536431984 0.09394689271485986 0.9438714419765777 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A'] 81967 8021 PSQQPLSQ True PC9_epitope_Rep1 883.4399456829099 883.4393949679301 35.674 1 -0.36104930852449046 0.09395949598118704 0.9438714419765777 ['ENST00000336095.10_1_20:3914236-3914335:-|nuORF'] 3007 8396 AFQGPREAD True PC9_epitope_Rep1 989.4566583762098 989.45556993586 37.132 2 -0.3610610580147994 0.09395949598118704 0.9438714419765777 ['ENSG00000206530|ENST00000393845|CFAP44'] 31895 6500 GEQGMSSWE True H1975_Epitope_Rep2 1009.38111047745 1009.38000993586 29.918 2 -0.3610916222877361 0.09395949598118704 0.9438714419765777 ['ENSG00000126882|ENST00000372271|FAM78A'] 9130 23795 AVLRYVRLFFF True PC9_epitope_Rep5 1429.8234265673698 1429.8223299358601 96.508 2 -0.361213326789983 0.09400884458795451 0.9438714419765777 ['ENST00000546957.1_1_12:56223229-56223322:-|nuORF'] 55240 18626 LAQAELPAI True PC9_epitope_Rep6 924.5280324113199 924.52692993586 84.287 2 -0.36122083728560944 0.09400884458795451 0.9438714419765777 ['DNAJB6-AGT|1|fusion', 'ENSG00000135744|ENST00000366667|AGT'] 35435 4879 GTDTTGQEVA True NCI_RA007_Epitope_Rep5 977.4301688448498 977.42906993586 25.461 2 -0.36127348506235235 0.09404064156108517 0.9438714419765777 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-2|METTL22'] 28303 13334 FRYMRIYRRYI True NCI_RA007_Epitope_Rep1 1635.8820211559898 1635.8809299358602 55.868 2 -0.36127529299817085 0.09404064156108517 0.9438714419765777 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 57264 7939 LEGAQVLRSR True PC9_epitope_Rep5 1127.64110510095 1127.63944490379 35.477 3 -0.3613496757351529 0.09409163493428326 0.9438714419765777 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-6|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-7|PDE4DIP', 'PDE4DIP|p.R930Sfs*80|1|0.35|ENSG00000178104|chr1:148981371-148981371|G/-|frameshift_variant', 'nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 83929 14943 QEKLQLEMHLR True NCI_RA007_Epitope_Rep2 1423.76056861063 1423.7594699358601 62.805 2 -0.3613882042436516 0.09410753141012143 0.9438714419765777 ['ENSG00000112984|ENST00000394894|KIF20A', 'nc|ENSG00000112984|O95235-2|KIF20A'] 108696 15565 TELVHQLQV True PC9_epitope_Rep5 1065.58185888933 1065.5807699358602 64.88 2 -0.3614496586432603 0.09415852182000035 0.9438714419765777 ['nc|ENSG00000106948|Q7Z591-6|AKNA'] 5465 12564 ALYQHANVV True PC9_epitope_Rep5 1013.5294293936499 1013.52832993586 53.328 2 -0.36158247538995225 0.09422375070185289 0.9438714419765777 ['ENSG00000006071|ENST00000389817|ABCC8', 'nc|ENSG00000006071|Q09428-2|ABCC8', 'ABCC8|p.Q1196Sfs*12|1|0.23|ENSG00000006071|chr11:17402725-17402725|G/-|frameshift_variant'] 115162 23594 TVAFPSTH True H1975_Epitope_Rep1 858.42356734278 858.42301496793 97.99 1 -0.361595518858509 0.09422375070185289 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 32195 3569 GFEDLERGRRE True NCI_RA007_Epitope_Rep2 1362.6640253734997 1362.66238490379 18.533 3 -0.36160040435786056 0.09422375070185289 0.9438714419765777 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A', 'nc|ENSG00000137474|Q13402-3|MYO7A', 'nc|ENSG00000137474|Q13402-4|MYO7A'] 67829 9880 LTIGHKYPSKE True H1975_Epitope_Rep1 1271.68738658703 1271.68628993586 42.937 2 -0.3617458519719848 0.09423798996385585 0.9438714419765777 ['ENSG00000165730|ENST00000298596|STOX1'] 102077 9812 SPPSPSSPLP True H1975_Epitope_Rep2 964.48656152216 964.48546993586 42.728 2 -0.3617515306136127 0.09423798996385585 0.9438714419765777 ['ENST00000575425.1_1_17:7239912-7245270:+|nuORF', 'ENST00000570457.6_1_17:7239900-7240612:+|nuORF'] 33094 4550 GKIKQVGI True NCI_RA007_Epitope_Rep4 841.5385375253699 841.53744993586 23.904 2 -0.3617755963093365 0.09425057459164518 0.9438714419765777 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 27948 6041 FQQYELDLREP True NCI_RA007_Epitope_Rep5 1436.6935941662796 1436.69194490379 29.918 3 -0.36177888765081845 0.09425057459164518 0.9438714419765777 ['ENSG00000162302|ENST00000334205|RPS6KA4'] 104391 11268 SSGSVLAGQV True PC9_epitope_Rep1 903.4661604307499 903.46506993586 48.223 2 -0.3617973626521918 0.09425057459164518 0.9438714419765777 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 39553 5208 HPGSFDVVHVK True NCI_RA007_Epitope_Rep3 1220.6302060640799 1220.62855490379 27.486 3 -0.3618592223488316 0.09426481166336252 0.9438714419765777 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENSG00000129824|ENST00000250784|RPS4Y1', 'ENST00000443195.1_1_1:20852889-20853234:+|nuORF'] 2961 15846 AFIEKHWTF True PC9_epitope_Rep4 1177.59202965021 1177.5903749037902 68.875 3 -0.3619052208238543 0.09426481166336252 0.9438714419765777 ['nc|ENSG00000149474|Q9H8E8-2|KAT14', 'ENSG00000149474|ENST00000688188|KAT14', 'nc|ENSG00000149474|Q9H8E8|KAT14'] 41299 17705 IAHEIYQKILS True PC9_epitope_Rep1 1313.7343367794501 1313.73268490379 72.897 3 -0.36192303582702456 0.09429824561403509 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 94252 5186 RWRRQQERRQQ True NCI_RA007_Epitope_Rep3 1625.87233586065 1625.8706849037903 27.394 3 -0.36206889388990326 0.09430255402750491 0.9438714419765777 ['RASIP1|p.R336W|1|0.24|ENSG00000105538|chr19:48735369-48735369|G/A|missense_variant'] 43680 4250 IINGKVGG True PC9_epitope_Rep4 756.4493881677998 756.44828993586 22.74 2 -0.3620846066948755 0.09430255402750491 0.9438714419765777 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 28301 12976 FRYMRIYRRYI True H1975_Epitope_Rep3 1635.8820211559898 1635.8809299358602 55.145 2 -0.362096079353961 0.09430255402750491 0.9438714419765777 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 125130 16922 VLPPDIRI True PC9_epitope_Rep5 921.5647522732099 921.56364993586 70.107 2 -0.3620993300414457 0.09430255402750491 0.9438714419765777 ['ENSG00000110060|ENST00000227474|PUS3'] 62926 20111 LNANTGLTL True PC9_epitope_Rep1 915.50254593947 915.50144993586 82.187 2 -0.3622172617199821 0.09430255402750491 0.9438714419765777 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 84038 7043 QEPKNSEPHDP True H1975_Epitope_Rep2 1276.5683936531598 1276.5672899358601 32.015 2 -0.36224876580061444 0.09430255402750491 0.9438714419765777 ['RTL3|p.Q159H|1|0.66|ENSG00000179300|chrX:78657944-78657944|C/A|missense_variant'] 115489 4289 TVGEHIQVK True PC9_epitope_Rep4 1009.5556441414899 1009.55454993586 22.907 2 -0.3622858946317904 0.09430255402750491 0.9438714419765777 ['ASXL3|p.T1839I|1|0.05|ENSG00000141431|chr18:33745364-33745364|C/T|missense_variant'] 63145 19711 LNREVRLHP True H1975_Epitope_Rep1 1132.6465248345598 1132.6454299358602 82.043 2 -0.3622939920345627 0.09430255402750491 0.9438714419765777 ['FAT2|p.D113Lfs*29|1|0.19|ENSG00000086570|chr5:151568591-151568595|CTGTC/-|frameshift_variant'] 89764 15018 RFCGWVEVF True PC9_epitope_Rep1 1141.5378859023697 1141.53678993586 62.587 2 -0.3624412596933717 0.09433432731099807 0.9438714419765777 ['ENST00000380834.6_1_2:25043232-25043718:+|nuORF'] 1234 4512 AEDIMEKDWNN True NCI_RA007_Epitope_Rep2 1363.5714304282699 1363.5697949037901 22.183 3 -0.3624699568101891 0.09433432731099807 0.9438714419765777 ['ENSG00000078401|ENST00000379375|EDN1'] 19697 9428 ELSEQLGQA True H1975_Epitope_Rep3 973.47163973401 973.47054993586 41.266 2 -0.36253235860740973 0.09434193910481269 0.9438714419765777 ['ENSG00000261150|ENST00000615648|EPPK1'] 129873 15906 VTLQNLGV True PC9_epitope_Rep5 842.4861675993399 842.48506993586 66.174 2 -0.3625403724354573 0.09434193910481269 0.9438714419765777 ['ENSG00000115850|ENST00000264162|LCT'] 59597 12012 LGSAVSLTI True NCI_RA007_Epitope_Rep5 859.50148331031 859.50038993586 52.864 2 -0.3625777767268166 0.09434193910481269 0.9438714419765777 ['ENSG00000149534|ENST00000278888|MS4A2'] 123717 8106 VIQEKEKKGKE True NCI_RA007_Epitope_Rep4 1314.7507151195798 1314.74960993586 37.967 2 -0.3626065906162867 0.09434193910481269 0.9438714419765777 ['ENSG00000089048|ENST00000617257|ESF1'] 98369 11513 SIHNSNLEERR True H1975_Epitope_Rep3 1353.67492441037 1353.6732749037901 49.41 3 -0.3626431675396194 0.09434193910481269 0.9438714419765777 ['ENST00000429210.1_1:206135358-206135544:-|nuORF'] 99249 14923 SLCWGWFSV True PC9_epitope_Rep2 1083.48478770035 1083.4836899358602 62.663 2 -0.3626956492348855 0.09434193910481269 0.9438714419765777 ['ENSG00000074276|ENST00000261944|CDHR2'] 68364 20076 LTSLRLKRFGP True PC9_epitope_Rep3 1286.78229003138 1286.78118993586 82.474 2 -0.362890308597199 0.09438958943510058 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'TTN|p.H3057Ifs*2|2|0.16|ENSG00000155657|chr2:178768151-178768151|A/-|frameshift_variant', 'TTN|p.P2078Qfs*61|1|0.14|ENSG00000155657|chr2:178775631-178775631|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 41327 19513 IAKNSYNDALL True PC9_epitope_Rep2 1220.6401020414398 1220.63900993586 80.44 2 -0.3629001496189851 0.09438958943510058 0.9438714419765777 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8'] 39548 15147 HPGFRQRCR True PC9_epitope_Rep2 1155.5832133853498 1155.58156490379 63.521 3 -0.36291659531315923 0.09438958943510058 0.9438714419765777 ['CD276|p.D84Pfs*82|1|0.1|ENSG00000103855|chr15:73702420-73702442|GCCAGGACCAGGGCAGCGCCTAT/-|frameshift_variant'] 65507 20557 LSFSMYQSFV True PC9_epitope_Rep2 1207.55834656343 1207.55724993586 84.506 2 -0.3629364030131121 0.09440050505936201 0.9438714419765777 ['ENSG00000189077|ENST00000493111|TMEM120A', 'ENST00000465989.1_1_7:75616979-75617289:-|nuORF', 'ENST00000440632.5_1_7:75616492-75617528:-|nuORF', 'ENST00000417509.5_1_7:75616545-75617528:-|nuORF'] 113494 9819 TQSKMYHCDIY True H1975_Epitope_Rep2 1387.59005769787 1387.5889699358602 42.752 2 -0.36294941961502414 0.09440050505936201 0.9438714419765777 ['ENSG00000197013|ENST00000358491|ZNF429'] 29731 15078 FVPQEMGVHTV True PC9_epitope_Rep5 1242.6066937381797 1242.60558993586 63.005 2 -0.36297231511496114 0.09440050505936201 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 18096 11594 EILAEELCTPP True H1975_Epitope_Rep1 1213.59004061453 1213.58894993586 49.585 2 -0.362988580009396 0.09440050505936201 0.9438714419765777 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF'] 120040 12146 VFEIDIKINY True H1975_Epitope_Rep3 1252.67033954056 1252.66924993586 51.887 2 -0.36301219143504615 0.09442729887073016 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 91966 4498 RPPPPPPPP True PC9_epitope_Rep6 950.5337864980999 950.53268993586 24.506 2 -0.3630226397643149 0.09442729887073016 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 39172 18622 HLFSDLNKLK True PC9_epitope_Rep1 1213.68190728377 1213.68080993586 76.417 2 -0.36303090671463084 0.09442729887073016 0.9438714419765777 ['ENSG00000163781|ENST00000260810|TOPBP1'] 59722 10213 LGVETKRWLSG True PC9_epitope_Rep5 1244.6877209401998 1244.68606490379 44.272 3 -0.3630374675329245 0.09442729887073016 0.9438714419765777 ['nc|ENSG00000134759|Q6IA86-4|ELP2'] 123447 8682 VIENSIAS True H1975_Epitope_Rep2 831.43379767331 831.43270993586 38.356 2 -0.3630393500599509 0.09442729887073016 0.9438714419765777 ['EHBP1-COMMD1|4|fusion'] 10502 12533 CNNRGVCLDQY True H1975_Epitope_Rep3 1283.5386908313499 1283.53758993586 53.406 2 -0.3631170382888672 0.09446071297059391 0.9438714419765777 ['ENSG00000136011|ENST00000388887|STAB2'] 112580 6934 TPAPPGPAT True PC9_epitope_Rep1 807.41266830591 807.41156993586 31.478 2 -0.3631597785378692 0.0944749346846452 0.9438714419765777 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 129111 6502 VTCGGGYQLN True H1975_Epitope_Rep3 1010.44913046762 1010.44802993586 29.981 2 -0.3631602555647865 0.0944749346846452 0.9438714419765777 ['ENST00000561483.5_1_15:84323016-84694242:+|nuORF', 'nc|ENSG00000156218|P82987-2|ADAMTSL3', 'ENSG00000156218|ENST00000286744|ADAMTSL3'] 127103 10267 VQATEIHNI True PC9_epitope_Rep1 1023.5349086969098 1023.53380993586 44.377 2 -0.3632753428797369 0.09451925099936882 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 66672 20101 LSSVGLSSV True PC9_epitope_Rep3 847.4650978015901 847.46400993586 82.57 2 -0.3632941104788089 0.09451925099936882 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 65253 20488 LSEGTILDL True PC9_epitope_Rep2 959.5175272972699 959.5169749679301 84.237 1 -0.3633043909038576 0.09451925099936882 0.9438714419765777 ['ENSG00000169594|ENST00000345382|BNC1'] 116437 15660 TWTEVSYTF True NCI_RA007_Epitope_Rep4 1132.5076908895599 1132.50717496793 68.021 1 -0.36331529403653534 0.09451925099936882 0.9438714419765777 ['ENSG00000116663|ENST00000376753|FBXO6'] 81280 7798 PPPVSCQMP True H1975_Epitope_Rep2 954.43030959934 954.42920993586 34.942 2 -0.3633802282239829 0.09451925099936882 0.9438714419765777 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.I1030Sfs*36|1|0.36|ENSG00000145934|chr5:168199038-168199044|CAATCAT/-|frameshift_variant'] 79232 7123 PGGGGSLPAG True PC9_epitope_Rep6 768.37661715036 768.37552993586 36.451 2 -0.3634546999072175 0.09455265880042779 0.9438714419765777 ['ENST00000331457.8_1_22:31795578-31795629:+|nuORF'] 3404 13988 AGKEDIIEWLS True NCI_RA007_Epitope_Rep1 1259.63976768827 1259.6391749679299 58.435 1 -0.36348273618796456 0.09458606543006416 0.9438714419765777 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.R1248Pfs*56|1|0.39|ENSG00000205978|chr14:24415486-24415487|-/G|frameshift_variant', 'NYNRIN|p.D217*|1|0.16|ENSG00000205978|chr14:24408318-24408319|-/T|frameshift_variant'] 39263 6834 HLPAGPSPA True PC9_epitope_Rep5 845.43955176009 845.43844993586 31.258 2 -0.3635291808500809 0.0946078603232479 0.9438714419765777 ['ENST00000394430.5_1_11:64511793-64512018:-|nuORF'] 26137 17446 FHLFNHSNF True PC9_epitope_Rep3 1161.53557740325 1161.53392490379 72.281 3 -0.36357118705432373 0.0946078603232479 0.9438714419765777 ['ENST00000232905.3_1_3:40353564-40353702:+|nuORF'] 3502 14782 AGLQFPVGR True PC9_epitope_Rep5 943.5239500903898 943.5234049679301 61.858 1 -0.3635807515701739 0.0946078603232479 0.9438714419765777 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'H2AC16|p.G68Afs*34|1|0.18|ENSG00000276903|chr6:27865555-27865555|G/-|frameshift_variant', 'H2AC14|p.R21L|1|0.25|ENSG00000276368|chr6:27814679-27814679|C/A|missense_variant', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18', 'ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2'] 81965 14017 PSQPVVTEITK True PC9_epitope_Rep1 1197.6605031328497 1197.6594099358601 58.755 2 -0.3635946330477223 0.0946078603232479 0.9438714419765777 ['nc|ENSG00000154134|Q96MS0-2|ROBO3', 'ENSG00000154134|ENST00000397801|ROBO3'] 110933 18230 TLATRRSL True PC9_epitope_Rep3 916.54541381096 916.54430993586 75.334 2 -0.36361268677951725 0.0946078603232479 0.9438714419765777 ['ENST00000500537.2_1_11:112831441-112833979:-|nuORF'] 23086 13018 EVLKKHHKP True NCI_RA007_Epitope_Rep1 1114.6611122695401 1114.6600099358602 54.63 2 -0.3636582217540527 0.0946078603232479 0.9438714419765777 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENST00000591556.1_1_17:40458135-40460407:+|nuORF'] 129039 12944 VTAGGTVG True H1975_Epitope_Rep1 660.34425439292 660.3437049679301 54.864 1 -0.3636633516037056 0.0946078603232479 0.9438714419765777 ['ENST00000308018.8_1_19:39423336-39423570:+|nuORF'] 119573 13925 VERKGEVL True PC9_epitope_Rep5 928.5341804209198 928.53308993586 58.583 2 -0.3636764476432668 0.0946078603232479 0.9438714419765777 ['ENSG00000124508|ENST00000356709|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'nc|ENSG00000112763|Q7KYR7-3|BTN2A1', 'ENST00000377600.6_1_6:26463094-26468774:+|nuORF', 'nc|ENSG00000112763|Q7KYR7-5|BTN2A1', 'ENSG00000112763|ENST00000312541|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-1|BTN2A1'] 134804 17150 WYQRWLVRF True NCI_RA007_Epitope_Rep3 1352.7142104715597 1352.71310993586 75.342 2 -0.36376617400043926 0.09464126071484916 0.9438714419765777 ['ENSG00000185518|ENST00000394232|SV2B', 'nc|ENSG00000185518|Q7L1I2-2|SV2B'] 75275 12521 NPQDVVQAI True PC9_epitope_Rep3 982.5083595958998 982.50726993586 53.187 2 -0.3637925571399408 0.09467300040316219 0.9438714419765777 ['ENSG00000080511|ENST00000591589|RDH8'] 601 5717 AASDAVLS True NCI_RA007_Epitope_Rep5 732.36538376032 732.36483496793 28.678 1 -0.3638056591887071 0.09467300040316219 0.9438714419765777 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 26319 20680 FIEKLTATI True PC9_epitope_Rep1 1034.60119735158 1034.60010993586 84.37 2 -0.3638367906987263 0.09468555002453902 0.9438714419765777 ['ENSG00000186416|ENST00000688521|NKRF', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 983 8185 AEADENDMFNY True H1975_Epitope_Rep2 1317.48194671753 1317.48084993586 36.434 2 -0.3638500152679528 0.09468555002453902 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3'] 13577 8872 DPPSNPVAA True PC9_epitope_Rep2 866.4133965819 866.41228993586 39.481 2 -0.36389977735132273 0.09468555002453902 0.9438714419765777 ['ENSG00000056277|ENST00000370978|ZNF280C'] 78100 9164 PANYADAP True PC9_epitope_Rep3 817.3606327330499 817.35952993586 40.189 2 -0.3639652968049765 0.09471821113136128 0.9438714419765777 ['ENSG00000178814|ENST00000618853|OPLAH'] 66562 5167 LSSKYIMFHVP True NCI_RA007_Epitope_Rep1 1320.69002943932 1320.68839490379 24.182 3 -0.36399903423314073 0.09471821113136128 0.9438714419765777 ['ENST00000249923.7_1_11:14479099-14479171:-|nuORF'] 15271 7815 EAGTLFQDP True H1975_Epitope_Rep2 976.4501760134399 976.44906993586 35.007 2 -0.36401345142947716 0.09471821113136128 0.9438714419765777 ['ENSG00000162909|ENST00000295006|CAPN2'] 107829 7641 TARCCDLP True H1975_Epitope_Rep2 877.3786083796499 877.37750993586 34.342 2 -0.36409265680849506 0.09471821113136128 0.9438714419765777 ['nc|ENSG00000143369|Q16610-2|ECM1', 'ENSG00000143369|ENST00000369047|ECM1', 'nc|ENSG00000143369|Q16610-4|ECM1'] 79441 14558 PGPLLRFLSF True PC9_epitope_Rep3 1145.65971528721 1145.65807490379 61.124 3 -0.3641060275526086 0.09471821113136128 0.9438714419765777 ['ENST00000370384.7_1_6:74019690-74019876:-|nuORF'] 78257 13380 PARHSFPLTI True PC9_epitope_Rep4 1137.6294777880898 1137.62782490379 59.369 3 -0.36411780847885794 0.09471821113136128 0.9438714419765777 ['ENST00000249883.9_1_3:134076331-134076550:-|nuORF'] 31638 12940 GEGVGQVNI True PC9_epitope_Rep3 871.43994568291 871.4393949679301 54.797 1 -0.3641322467281089 0.09471821113136128 0.9438714419765777 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259'] 86873 20315 QRRERRFRRYL True NCI_RA007_Epitope_Rep2 1634.9342078412196 1634.93310993586 84.052 2 -0.3641684381465511 0.09471821113136128 0.9438714419765777 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 110316 20373 TIIIFHSLL True PC9_epitope_Rep5 1055.63791721347 1055.63682993586 83.399 2 -0.364179836436294 0.09471821113136128 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENST00000471498.5_1_1:28324859-28384546:-|nuORF', 'ENSG00000064655|ENST00000327619|EYA2', 'nc|ENSG00000064655|O00167-2|EYA2', 'nc|ENSG00000064655|O00167-3|EYA2', 'nc|ENSG00000158161|Q99504-2|EYA3', 'nc|ENSG00000158161|Q99504-4|EYA3', 'nc|ENSG00000158161|Q99504-5|EYA3', 'nc|ENSG00000158161|Q99504-3|EYA3', 'ENSG00000158161|ENST00000373871|EYA3'] 12709 10914 DLFPYEESK True H1975_Epitope_Rep1 1126.51825557326 1126.51714993586 46.943 2 -0.3642190459666532 0.09471821113136128 0.9438714419765777 ['ENST00000482651.5_1_1:156713243-156717241:-|nuORF', 'ENST00000465180.5_1_1:156713243-156725382:-|nuORF', 'nc|ENSG00000143321|P51858-2|HDGF', 'ENSG00000143321|ENST00000357325|HDGF', 'nc|ENSG00000143321|P51858-3|HDGF', 'ENST00000469145.5_1_1:156714305-156721275:-|nuORF'] 63699 20405 LPQEYFLF True NCI_RA007_Epitope_Rep4 1055.5327834385898 1055.5316899358602 88.351 2 -0.3642450210808898 0.09471821113136128 0.9438714419765777 ['ENSG00000185272|ENST00000400577|RBM11'] 128569 7818 VSISKNDY True PC9_epitope_Rep1 924.4552613938799 924.45416993586 34.896 2 -0.3642465837180306 0.09471821113136128 0.9438714419765777 ['ALPK1|p.M249I|1|0.33|ENSG00000073331|chr4:112427617-112427617|G/C|missense_variant'] 25995 21250 FHCFFLGL True PC9_epitope_Rep4 982.4734947406598 982.47238993586 89.902 2 -0.3642620876896931 0.09472909511460012 0.9438714419765777 ['ENST00000556039.5_1_14:53110276-53130527:-|nuORF', 'ENST00000554019.5_1_14:53110290-53130527:-|nuORF'] 119687 4283 VESWSYSQQRR True H1975_Epitope_Rep3 1424.6796754376398 1424.6785699358602 21.591 2 -0.3642724427268812 0.09472909511460012 0.9438714419765777 ['PCDHA6|p.G746E|1|0.18|ENSG00000081842|chr5:140830328-140830328|G/A|missense_variant'] 9086 17464 AVLDELKNMKC True PC9_epitope_Rep5 1262.6362796142998 1262.63464490379 72.175 3 -0.36427344045027726 0.09472909511460012 0.9438714419765777 ['ENSG00000055163|ENST00000620254|CYFIP2', 'CYFIP2|p.A905Sfs*86|1|0.34|ENSG00000055163|chr5:157341122-157341122|G/TC|frameshift_variant', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'CYFIP2|p.A905Cfs*86|1|0.46|ENSG00000055163|chr5:157341120-157341121|-/T|frameshift_variant', 'ENST00000518511.1_1_5:156727833-156729928:+|nuORF', 'ENSG00000273749|ENST00000617928|CYFIP1', 'CYFIP1|p.R365Lfs*68|1|0.19|ENSG00000273749|chr15:22932238-22932239|GC/-|frameshift_variant'] 41072 12481 HYKPTPLYF True PC9_epitope_Rep6 1164.59678067748 1164.59568993586 59.429 2 -0.3642952172170655 0.09472909511460012 0.9438714419765777 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 93501 11638 RSKTDLDCIF True PC9_epitope_Rep1 1196.5859582935998 1196.58430490379 49.645 3 -0.36436222187794576 0.0947766816772091 0.9438714419765777 ['ENSG00000254093|ENST00000314787|PINX1', 'ENST00000524061.1_1_8:10645233-10677771:-|nuORF'] 98263 6515 SIFEHVDRISR True NCI_RA007_Epitope_Rep2 1357.71024728993 1357.70860490379 29.952 3 -0.3643647239184522 0.0947766816772091 0.9438714419765777 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549', 'nc|ENSG00000122778|Q9HCM3-3|KIAA1549', 'nc|ENSG00000122778|Q9HCM3-4|KIAA1549'] 79827 6174 PIEHGIITN True PC9_epitope_Rep2 992.52909504048 992.52798993586 29.139 2 -0.36440550953615136 0.0947766816772091 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF'] 12434 7690 DKKKPSPPAP True H1975_Epitope_Rep2 1063.6025943339098 1063.6014899358602 34.531 2 -0.3644641300529634 0.09483846099936927 0.9438714419765777 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 67974 10104 LTLQEYEFEK True PC9_epitope_Rep1 1298.6394333350997 1298.63779490379 43.738 3 -0.36451704998765383 0.09483846099936927 0.9438714419765777 ['ENSG00000170522|ENST00000302274|ELOVL6'] 58247 6825 LETAAPAPRPY True H1975_Epitope_Rep3 1184.61897267404 1184.6178699358602 31.208 2 -0.3645290007430785 0.09483846099936927 0.9438714419765777 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 63636 24422 LPNLFSVIDYF True PC9_epitope_Rep1 1326.6859896046997 1326.6854749679298 98.783 1 -0.36455681254887795 0.09483846099936927 0.9438714419765777 ['ENSG00000035720|ENST00000265404|STAP1'] 85749 20031 QLVEGLHYL True PC9_epitope_Rep2 1070.5760452329 1070.57494993586 82.453 2 -0.36456868343345655 0.09483846099936927 0.9438714419765777 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN'] 127083 13351 VQAEKKIEV True PC9_epitope_Rep1 1042.60225998074 1042.60116993586 56.215 2 -0.36461084087473483 0.09485265776656505 0.9438714419765777 ['ENSG00000075539|ENST00000358350|FRYL', 'ENST00000302806.5_1_4:48621203-48655803:-|nuORF'] 110402 9439 TIMERFQMELK True NCI_RA007_Epitope_Rep1 1424.7155925641598 1424.71393490379 40.71 3 -0.36462596609387593 0.09485265776656505 0.9438714419765777 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 7958 3074 ATDKSFVEK True NCI_RA007_Epitope_Rep5 1023.5236753068699 1023.5225699358599 17.021 2 -0.36464027259624054 0.09486851556614517 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 7508 4442 ASEKMAQGQLK True NCI_RA007_Epitope_Rep3 1189.6125073946098 1189.6108649037901 24.272 3 -0.36468736172695315 0.09488271053415322 0.9438714419765777 ['ENSG00000198597|ENST00000355537|ZNF536'] 48766 8275 KEQKQNFKAQK True H1975_Epitope_Rep1 1375.7571974823497 1375.7561099358602 36.763 2 -0.36473567132685364 0.09488271053415322 0.9438714419765777 ['ENSG00000175820|ENST00000322527|CCDC168'] 83525 11608 QDLAEQLQ True PC9_epitope_Rep5 943.46107505031 943.45996993586 49.647 2 -0.3647451577041762 0.09489690450747158 0.9438714419765777 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 23934 15528 EYNNNFHVL True PC9_epitope_Rep5 1148.5250722892001 1148.5239699358601 64.739 2 -0.364747685745024 0.09489690450747158 0.9438714419765777 ['ENST00000425988.1_1_13:23411483-23411888:-|nuORF', 'ENSG00000151151|ENST00000373935|IPMK'] 16665 10344 EETPEEWNLYY True H1975_Epitope_Rep2 1471.61434078607 1471.61324993586 44.796 2 -0.36483508550719285 0.09494779623011702 0.9438714419765777 ['ENSG00000130159|ENST00000270517|ECSIT', 'nc|ENSG00000130159|Q9BQ95-3|ECSIT'] 19763 17054 ELSWEAQL True PC9_epitope_Rep5 974.4709114580198 974.46980993586 70.617 2 -0.3649041192274016 0.09496032371643282 0.9438714419765777 ['MYOM3|p.R248Afs*30|1|0.13|ENSG00000142661|chr1:24097926-24097926|G/-|frameshift_variant', 'ENST00000475306.1_1_1:24410803-24434643:-|nuORF', 'nc|ENSG00000142661|Q5VTT5-2|MYOM3', 'MYOM3|p.A1158Qfs*70|2|0.24|ENSG00000142661|chr1:24065953-24065953|C/-|frameshift_variant', 'ENSG00000142661|ENST00000374434|MYOM3'] 91517 5474 RPAAGFVA True PC9_epitope_Rep6 787.4340724568299 787.43296993586 28.998 2 -0.3649236174375007 0.09496032371643282 0.9438714419765777 ['ENSG00000141526|ENST00000582743|SLC16A3'] 2795 9676 AEVEERRSWQE True NCI_RA007_Epitope_Rep1 1417.6586056398899 1417.6575099358602 41.636 2 -0.36492721518963755 0.09496032371643282 0.9438714419765777 ['ENSG00000132740|ENST00000255078|IGHMBP2'] 36652 20909 GVLPQLSMV True PC9_epitope_Rep4 942.5208388559 942.52029496793 88.586 1 -0.3650145837332986 0.09497617713004484 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 4882 6690 ALGENGVIK True PC9_epitope_Rep6 899.5076313199099 899.50652993586 34.489 2 -0.3650944725522774 0.09500788229111928 0.9438714419765777 ['ENST00000496004.5_1_7:151188088-151217094:-|nuORF'] 115989 15049 TVQNVTLSL True NCI_RA007_Epitope_Rep3 973.54441075145 973.54330993586 66.661 2 -0.36509579621078503 0.09500788229111928 0.9438714419765777 ['ENSG00000152193|ENST00000282003|OBI1'] 134624 9744 WWFSWRRRDFL True NCI_RA007_Epitope_Rep2 1653.8316998352896 1653.8306099358601 42.523 2 -0.3652406618779785 0.09505876582999072 0.9438714419765777 ['ENSG00000132793|ENST00000373257|LPIN3', 'nc|ENSG00000132793|Q9BQK8-2|LPIN3'] 30017 19440 FYHKYFNYL True PC9_epitope_Rep3 1293.61824439805 1293.6166049037902 80.002 3 -0.36529835305314007 0.09508880092479069 0.9438714419765777 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 101888 13330 SPLHLAVEA True PC9_epitope_Rep2 935.5076313199099 935.50652993586 56.546 2 -0.36530604620392726 0.09508880092479069 0.9438714419765777 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 49095 18254 KGAAGFSI True PC9_epitope_Rep1 749.4071890026501 749.40608993586 75.003 2 -0.3653286497502365 0.09508880092479069 0.9438714419765777 ['ENSG00000144029|ENST00000272418|MRPS5'] 85107 5089 QISAADTTYP True H1975_Epitope_Rep2 1065.49785448185 1065.4967499358602 24.657 2 -0.3653689957704853 0.09509965322778381 0.9438714419765777 ['ENSG00000141519|ENST00000397545|CCDC40', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'nc|ENSG00000141519|Q4G0X9-4|CCDC40', 'ENST00000572083.5_1_17:78011982-78014189:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-5|CCDC40'] 120873 7254 VGDVFRGG True H1975_Epitope_Rep3 805.4082516318099 805.40714993586 32.876 2 -0.36537586319458837 0.09509965322778381 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 44532 10381 IPALICLHPLF True H1975_Epitope_Rep1 1235.71003660791 1235.7089299358602 44.879 2 -0.36538368007153893 0.09509965322778381 0.9438714419765777 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 118960 15346 VEEVTWFLP True PC9_epitope_Rep3 1118.5648118428599 1118.56370993586 64.184 2 -0.365387340492253 0.09509965322778381 0.9438714419765777 ['ENST00000433644.2_2_9:98178049-98189049:-|nuORF'] 82102 10779 PTAEGLAAAA True PC9_epitope_Rep5 870.4446967101799 870.44358993586 46.453 2 -0.365416039708001 0.09511550114713042 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 69533 17486 LVTAAILVAV True PC9_epitope_Rep5 968.6270181765999 968.62592993586 72.262 2 -0.3655714325958751 0.09513134851138354 0.9438714419765777 ['nc|ENSG00000152291|O43493-6|TGOLN2', 'nc|ENSG00000152291|O43493-4|TGOLN2', 'ENSG00000152291|ENST00000377386|TGOLN2', 'nc|ENSG00000152291|O43493-5|TGOLN2', 'nc|ENSG00000152291|O43493-3|TGOLN2', 'nc|ENSG00000152291|O43493-7|TGOLN2'] 102991 18418 SQISDTSVVL True PC9_epitope_Rep3 1047.5448046742702 1047.54427496793 76.05 1 -0.36560225233017 0.09514719532057232 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'ENST00000430398.2_1_1:73570714-73571443:+|nuORF', 'ENST00000450021.1_1_2:183936291-183936849:-|nuORF', 'ENST00000512037.2_1_4:103650201-103650651:-|nuORF', 'CON__H-INV:HIT000016045', 'ENST00000414328.2_1_1:157043381-157043870:+|nuORF', 'ENST00000396270.3_1_12:69099864-69100302:+|nuORF', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000548088.1_1_12:52632481-52635423:+|nuORF', 'CON__H-INV:HIT000292931'] 100119 16063 SLLCLPIMT True PC9_epitope_Rep4 989.52896101145 989.5278699358599 69.72 2 -0.3656514967851579 0.09515804220295947 0.9438714419765777 ['nc|ENSG00000141506|Q8WYR1-2|PIK3R5', 'ENSG00000141506|ENST00000447110|PIK3R5', 'ENST00000585260.5_1_17:8783958-8784126:-|nuORF', 'ENST00000583810.5_1_17:8783958-8785234:-|nuORF'] 98290 5713 SIFMMQRFGRK True NCI_RA007_Epitope_Rep1 1399.7216810041098 1399.72003490379 26.28 3 -0.3656546665239255 0.09515804220295947 0.9438714419765777 ['nc|ENSG00000172940|Q9Y226-2|SLC22A13', 'ENSG00000172940|ENST00000311856|SLC22A13'] 68037 15047 LTNESVWQI True H1975_Epitope_Rep2 1088.5502244078798 1088.54912993586 63.029 2 -0.36566753921089146 0.09515804220295947 0.9438714419765777 ['ENSG00000124201|ENST00000396105|ZNFX1', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 126926 8721 VPVDTGVAA True PC9_epitope_Rep6 827.4388830537498 827.43778993586 43.404 2 -0.36570065762919385 0.09515804220295947 0.9438714419765777 ['nc|ENSG00000101150|O43399-2|TPD52L2', 'nc|ENSG00000101150|O43399-4|TPD52L2', 'ENSG00000101150|ENST00000346249|TPD52L2', 'nc|ENSG00000101150|O43399-3|TPD52L2', 'nc|ENSG00000101150|O43399-5|TPD52L2', 'nc|ENSG00000101150|O43399-7|TPD52L2'] 920 10405 ADSAGLLPP True NCI_RA007_Epitope_Rep4 839.4388830537499 839.43833496793 46.875 1 -0.365757841962328 0.09518306455849136 0.9438714419765777 ['ENST00000368324.4_1_1:155854169-155854304:+|nuORF'] 33387 5715 GLFCCARYSK True NCI_RA007_Epitope_Rep4 1146.5314206229398 1146.52978490379 28.597 3 -0.36578159357595036 0.09518306455849136 0.9438714419765777 ['ENSG00000218819|ENST00000405799|TDRD15'] 69816 5240 LWWEKRQHYRE True NCI_RA007_Epitope_Rep2 1629.8164436939699 1629.81478490379 25.003 3 -0.3657994782928699 0.09518306455849136 0.9438714419765777 ['ENST00000411999.1_1_2:197893450-197893558:-|nuORF'] 86220 5097 QPWRGGAGA True PC9_epitope_Rep5 898.4409487424198 898.43984993586 24.631 2 -0.36581824653165873 0.09518306455849136 0.9438714419765777 ['ENSG00000165684|ENST00000684778|SNAPC4'] 27031 13063 FLLSYKVQP True H1975_Epitope_Rep3 1093.6171817688898 1093.6160899358601 55.488 2 -0.36582064999761227 0.09518306455849136 0.9438714419765777 ['ENST00000521259.1_1_8:87516185-87516770:+|nuORF'] 111879 16906 TLRPGVTVI True PC9_epitope_Rep5 954.5862159937799 954.58510993586 70.043 2 -0.3658919650489698 0.09518306455849136 0.9438714419765777 ['ENST00000478953.1_1_10:99379422-99393256:-|nuORF'] 17078 6131 EGQLRSETL True NCI_RA007_Epitope_Rep4 1031.5247379360299 1031.52364993586 30.196 2 -0.36594630615117585 0.09523392632021291 0.9438714419765777 ['ENST00000372146.4_1_9:135565236-135565311:+|nuORF'] 31044 9509 GAVQAEYLQL True NCI_RA007_Epitope_Rep4 1090.56587447202 1090.56476993586 43.428 2 -0.3660032154598264 0.09526560913261196 0.9438714419765777 ['ENST00000318430.9_1_17:76133438-76134232:+|nuORF'] 541 6366 AAQESSPM True PC9_epitope_Rep5 819.34326841675 819.3421699358599 29.464 2 -0.36602210569768967 0.09526560913261196 0.9438714419765777 ['ENST00000485596.5_1_15:85634092-85681131:+|nuORF', 'nc|ENSG00000073417|O60658-6|PDE8A', 'nc|ENSG00000073417|O60658-2|PDE8A', 'ENSG00000073417|ENST00000394553|PDE8A'] 17660 13485 EHRKDLGL True PC9_epitope_Rep1 966.5246783663798 966.52358993586 56.726 2 -0.36609698323550194 0.09533397531296507 0.9438714419765777 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'nc|ENSG00000101624|Q8TAP6-2|CEP76'] 54288 7997 KYPNVFKKI True PC9_epitope_Rep6 1135.67536535135 1135.67371490379 40.224 3 -0.3661156480827944 0.09534480645669567 0.9438714419765777 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 89538 3491 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5876299358601 19.38 2 -0.36613704849499723 0.09534480645669567 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 43480 20719 IHVIKPVLP True PC9_epitope_Rep5 1014.6589870112199 1014.65788993586 84.753 2 -0.3661882419407908 0.09534480645669567 0.9438714419765777 ['ENSG00000059588|ENST00000040877|TARBP1'] 123273 23474 VHRERRRKA True PC9_epitope_Rep2 1206.71700443622 1206.71590993586 95.763 2 -0.3662207892236925 0.09534480645669567 0.9438714419765777 ['ENSG00000215045|ENST00000457091|GRID2IP'] 131666 20004 VWKRWKKRYFV True PC9_epitope_Rep6 1594.9248719441398 1594.92376993586 89.611 2 -0.3662439025911063 0.09537648150417535 0.9438714419765777 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 82109 13518 PTAPGLQL True PC9_epitope_Rep5 795.4490538146299 795.44794993586 57.019 2 -0.36624950052123123 0.09537648150417535 0.9438714419765777 ['ENST00000555147.1_1_16:89984433-89984928:+|nuORF'] 66555 20972 LSSITSVTV True PC9_epitope_Rep4 905.5069626135701 905.50586993586 88.83 2 -0.36632834260927793 0.09540815433363094 0.9438714419765777 ['TMEM62|p.V409Sfs*4|1|0.13|ENSG00000137842|chr15:43160722-43160723|TG/-|frameshift_variant', 'ENSG00000137842|ENST00000260403|TMEM62'] 101461 5842 SNNPLRYKFSC True NCI_RA007_Epitope_Rep5 1327.63430546835 1327.6332099358601 29.156 2 -0.36634514073396446 0.09540815433363094 0.9438714419765777 ['AASS|p.W652C|1|0.37|ENSG00000008311|chr7:122091763-122091763|C/A|missense_variant'] 83193 20611 PYYQPPYTL True PC9_epitope_Rep5 1140.54916177872 1140.5480699358602 84.329 2 -0.36646569802994516 0.09542231947483588 0.9438714419765777 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50', 'ENST00000595961.5_1_19:39976255-39976534:+|nuORF'] 98271 19518 SIFETIYHGVP True PC9_epitope_Rep3 1261.63428838501 1261.6331899358602 80.308 2 -0.3664711629822911 0.09542231947483588 0.9438714419765777 ['ENSG00000174607|ENST00000310836|UGT8'] 140381 10799 YYELWWFWLVW True NCI_RA007_Epitope_Rep1 1689.8020224164497 1689.80038490379 46.001 3 -0.36649524009617057 0.09545231760257666 0.9438714419765777 ['nc|ENSG00000166272|Q9NX94|WBP1L', 'ENSG00000166272|ENST00000448841|WBP1L'] 93779 7393 RTTFVVGG True NCI_RA007_Epitope_Rep4 835.4552018242298 835.4546549679301 35.079 1 -0.366524969325473 0.09545231760257666 0.9438714419765777 ['ENST00000397722.5_1_16:450423-450627:+|nuORF'] 84189 6130 QESPPAAAV True H1975_Epitope_Rep3 868.4290466460399 868.4284949679301 28.591 1 -0.3665281214095302 0.09545231760257666 0.9438714419765777 ['nc|ENSG00000143514|Q13625-2|TP53BP2', 'nc|ENSG00000143514|Q13625|TP53BP2', 'TP53BP2|p.P897Ffs*30|2|0.3|ENSG00000143514|chr1:223795848-223795850|CGG/AA|frameshift_variant', 'ENSG00000143514|ENST00000343537|TP53BP2'] 88390 18277 QYPLCPRSI True PC9_epitope_Rep1 1075.54845058607 1075.5473499358602 75.091 2 -0.3665828317017856 0.09546480894785668 0.9438714419765777 ['ENST00000525598.1_1_11:118982915-118984090:+|nuORF'] 20345 11998 EPGFSEVLP True NCI_RA007_Epitope_Rep4 973.4756624852898 973.47511496793 53.155 1 -0.3666984460444919 0.09546480894785668 0.9438714419765777 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 100809 15238 SLRTALILH True PC9_epitope_Rep3 1022.62366413166 1022.62256993586 63.761 2 -0.36671224107474126 0.09546480894785668 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 44304 21228 ILYFYVLSL True PC9_epitope_Rep5 1129.64233388757 1129.64122993586 86.703 2 -0.366752289416425 0.09551564797311489 0.9438714419765777 ['OR2G6|p.L168Pfs*13|1|0.17|ENSG00000188558|chr1:248522144-248522145|-/C|frameshift_variant', 'ENSG00000188558|ENST00000641804|OR2G6', 'OR2G6|p.L40P|1|0.14|ENSG00000188558|chr1:248521765-248521765|T/C|missense_variant', 'OR2G6|p.G41W|1|0.09|ENSG00000188558|chr1:248521767-248521767|G/T|missense_variant'] 6756 14586 AQELHTFEV True PC9_epitope_Rep3 1072.5189242796 1072.5178299358602 61.232 2 -0.36683240623683355 0.09552980712010362 0.9438714419765777 ['ENSG00000149806|ENST00000529639|FAU', 'ENST00000531357.1_1_11:64889042-64889375:-|nuORF'] 46439 8282 ITLPEGSVIS True H1975_Epitope_Rep1 1014.5597264624199 1014.55862993586 36.79 2 -0.36688305693183376 0.09552980712010362 0.9438714419765777 ['ENSG00000145191|ENST00000648915|EIF2B5', 'ENST00000492773.5_1_3:183859720-183860594:+|nuORF', 'ENST00000491144.5_1_3:183857994-183862728:+|nuORF'] 91981 5344 RPREALSTNEC True PC9_epitope_Rep1 1274.6037336160598 1274.60209490379 25.395 3 -0.36692977124281234 0.09558064233832152 0.9438714419765777 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'AGPS|p.R117Gfs*22|1|0.11|ENSG00000018510|chr2:177420351-177420351|G/-|frameshift_variant', 'ENSG00000018510|ENST00000264167|AGPS'] 25840 16222 FGFLYLLTF True NCI_RA007_Epitope_Rep2 1119.60046907559 1119.59936993586 67.828 2 -0.3669949029265704 0.0955964715765892 0.9438714419765777 ['nc|ENSG00000285010|A0A2R8YFL7|OOSP4A'] 110252 16536 TIETYKNIESY True H1975_Epitope_Rep3 1359.6558116752299 1359.6547099358602 69.102 2 -0.367027698069568 0.09561062690328678 0.9438714419765777 ['nc|ENSG00000147650|Q9Y561-2|LRP12', 'ENSG00000147650|ENST00000276654|LRP12', 'LRP12|p.E379Kfs*109|1|0.3|ENSG00000147650|chr8:104497417-104497417|C/-|frameshift_variant'] 66045 18894 LSNEEIQQAI True PC9_epitope_Rep4 1143.57716743171 1143.57606993586 80.763 2 -0.3670389239044791 0.09561062690328678 0.9438714419765777 ['DAAM2|p.R696Q|1|0.28|ENSG00000146122|chr6:39888705-39888705|G/A|missense_variant'] 44927 6634 IQEEKENTEQR True PC9_epitope_Rep3 1402.6688359704199 1402.66720490379 30.54 3 -0.3670822856925415 0.09562478123906196 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'ENST00000526262.5_1_11:70189825-70228249:+|nuORF', 'ENST00000532504.5_1_11:70185286-70228249:+|nuORF'] 74957 16304 NLVAWSPL True PC9_epitope_Rep2 898.49125297978 898.49070496793 67.958 1 -0.36708534987415403 0.09562478123906196 0.9438714419765777 ['ENST00000517790.1_1_8:128808194-128902837:+|nuORF', 'ENST00000518528.1_1_8:128808194-128808275:+|nuORF', 'ENST00000524165.5_1_8:128808194-128867457:+|nuORF', 'ENST00000517525.1_1_8:128808194-128951828:+|nuORF'] 49448 6010 KIQYRAVP True NCI_RA007_Epitope_Rep4 973.5709002828098 973.56980993586 29.736 2 -0.36712424912710384 0.09563558728825423 0.9438714419765777 ['LBR|p.D412Y|1|0.12|ENSG00000143815|chr1:225410371-225410371|C/A|missense_variant'] 107415 17493 SYTSGLETL True PC9_epitope_Rep4 969.4654917244101 969.46494496793 75.288 1 -0.36712807492364075 0.09563558728825423 0.9438714419765777 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 16994 13287 EGIITIKQNLD True H1975_Epitope_Rep1 1242.6819668534201 1242.68086993586 56.211 2 -0.3671590979698729 0.09563558728825423 0.9438714419765777 ['CDH9|p.V331I|1|0.4|ENSG00000113100|chr5:26903645-26903645|C/T|missense_variant'] 27239 9359 FLVPDHTIK True NCI_RA007_Epitope_Rep1 1068.59678067748 1068.59568993586 40.398 2 -0.3671608681321911 0.09563558728825423 0.9438714419765777 ['ENSG00000141034|ENST00000268719|GID4'] 63637 24421 LPNLFSVIDYF True PC9_epitope_Rep1 1326.6859896046997 1326.6848899358602 98.779 2 -0.3672249181994116 0.0956689124157844 0.9438714419765777 ['ENSG00000035720|ENST00000265404|STAP1'] 93134 20408 RRRRHRHLAV True NCI_RA007_Epitope_Rep1 1355.8235351934302 1355.82242993586 83.593 2 -0.3672576998715144 0.09568473733944632 0.9438714419765777 ['ENST00000589935.1_1_18:54318575-54318788:+|nuORF'] 71036 4216 MESRPPPPP True H1975_Epitope_Rep2 1006.4906013567798 1006.48950993586 21.325 2 -0.36727352922476586 0.09570056170927607 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 129105 9907 VTAVSLPR True PC9_epitope_Rep5 841.5021520166499 841.50104993586 43.079 2 -0.3673334458830171 0.09571136113103883 0.9438714419765777 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 11003 7539 DDFDPAST True NCI_RA007_Epitope_Rep3 866.32939217442 866.32828993586 36.775 2 -0.36736485857662393 0.09571136113103883 0.9438714419765777 ['ENST00000509702.5_1_4:23766811-23826805:-|nuORF', 'nc|ENSG00000109819|Q9UBK2-9|PPARGC1A', 'nc|ENSG00000109819|Q9UBK2-4|PPARGC1A', 'ENSG00000109819|ENST00000264867|PPARGC1A', 'nc|ENSG00000109819|Q9UBK2-3|PPARGC1A'] 36398 22095 GVIDDAFAL True PC9_epitope_Rep2 919.46509780159 919.46400993586 90.46 2 -0.36739231307933007 0.09571136113103883 0.9438714419765777 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA'] 67837 9806 LTIQNTLL True NCI_RA007_Epitope_Rep4 914.54368247546 914.54258993586 44.569 2 -0.36739487854237185 0.09571136113103883 0.9438714419765777 ['ENST00000486166.1_1_X:16875796-16876897:-|nuORF'] 3367 14537 AGIEQEGYWL True NCI_RA007_Epitope_Rep3 1164.5451390274397 1164.5440499358601 64.495 2 -0.36747005105684183 0.09572383385239878 0.9438714419765777 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 31188 16908 GDGPIC[Carbamidomethyl]LVL True H1975_Epitope_Rep1 942.4844536266099 942.48390496793 70.449 1 -0.36749533697944725 0.09572383385239878 0.9438714419765777 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF', 'ENST00000583894.1_1_17:62499542-62500133:-|nuORF', 'ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 11496 21562 DGFLSELTQQL True NCI_RA007_Epitope_Rep1 1249.6190322436898 1249.61792993586 88.224 2 -0.3675244783677743 0.09572383385239878 0.9438714419765777 ['ENSG00000240972|ENST00000215754|MIF', 'ENST00000465752.1_1_22:24236661-24237189:+|nuORF'] 31180 15082 GDFGSATF True PC9_epitope_Rep4 800.33408363204 800.3335349679301 65.945 1 -0.3675826444411889 0.09573798026453915 0.9438714419765777 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF'] 11854 4265 DHNDGLGNAF True NCI_RA007_Epitope_Rep4 1058.44173658806 1058.4406299358602 22.736 2 -0.36759589009875465 0.09573798026453915 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 70135 17296 LYKNLEIIDLY True H1975_Epitope_Rep2 1395.7649682013898 1395.7638699358602 71.822 2 -0.36764095756947063 0.09575380093426877 0.9438714419765777 ['ENST00000573577.5_1_17:5336118-5336172:+|nuORF'] 37518 19330 GYILTYQF True NCI_RA007_Epitope_Rep5 1003.5014833103099 1003.50038993586 81.231 2 -0.3678294694757082 0.09578711641415025 0.9438714419765777 ['ENSG00000120332|ENST00000239462|TNN'] 40315 17931 HRRRLGGGG True NCI_RA007_Epitope_Rep2 964.5427284723597 964.54162993586 74.484 2 -0.36789200259081734 0.09583457252322387 0.9438714419765777 ['ENST00000423968.6_1_3:138067537-138091710:+|nuORF'] 135087 7794 YALPKDLQI True PC9_epitope_Rep2 1059.59644632431 1059.5953499358602 35.351 2 -0.3679383296447648 0.09583457252322387 0.9438714419765777 ['ENSG00000184985|ENST00000507866|SORCS2'] 124211 20139 VLAPSLVVA True PC9_epitope_Rep2 867.5429541994699 867.5424049679301 82.876 1 -0.36794228993222183 0.09583457252322387 0.9438714419765777 ['ENSG00000213901|ENST00000409878|SLC23A3', 'nc|ENSG00000213901|Q6PIS1-5|SLC23A3', 'ENST00000497918.5_1_2:220033318-220033813:-|nuORF', 'nc|ENSG00000213901|Q6PIS1-2|SLC23A3'] 137898 6388 YPNSGSVSA True PC9_epitope_Rep4 880.39266113732 880.3921149679301 31.66 1 -0.36801993434833574 0.09584703659645931 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 126282 9013 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48506993586 44.7 2 -0.36803510747351365 0.09584703659645931 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 65956 15810 LSLNNKTVP True PC9_epitope_Rep5 984.56039516876 984.55928993586 65.803 2 -0.36809610039434243 0.09584703659645931 0.9438714419765777 ['ENST00000367879.8_1_1:165877228-165877291:+|nuORF'] 72594 10118 MVRPWREREPV True PC9_epitope_Rep2 1453.7612373169702 1453.75960490379 44.257 3 -0.3681403352889935 0.09586285314440654 0.9438714419765777 ['ENST00000558090.2_1_15:83515441-83515591:-|nuORF'] 5533 7215 ANETENDIKV True PC9_epitope_Rep1 1131.54078192299 1131.53968993586 32.567 2 -0.368242135680693 0.09594696240838246 0.9438714419765777 ['ENSG00000175820|ENST00000322527|CCDC168'] 117547 9378 VAGDKNTAIV True H1975_Epitope_Rep3 986.53965972418 986.53856993586 41.072 2 -0.36827559426918305 0.09594696240838246 0.9438714419765777 ['ENSG00000204361|ENST00000389586|NXPE2'] 105369 6829 STYQFNSP True H1975_Epitope_Rep3 942.4083112014599 942.40720993586 31.223 2 -0.3682899971397288 0.09596277637839351 0.9438714419765777 ['ENST00000505045.1_1_5:26903562-26988455:-|nuORF', 'CDH9|p.G782Efs*3|1|0.23|ENSG00000113100|chr5:26881161-26881162|-/T|frameshift_variant', 'ENSG00000113100|ENST00000231021|CDH9', 'CDH9|p.N262Kfs*15|1|0.14|ENSG00000113100|chr5:26905987-26905987|G/TC|frameshift_variant', 'CDH9|p.P269A|1|0.57|ENSG00000113100|chr5:26905965-26905965|G/C|missense_variant'] 98932 9805 SIYLFWYQY True H1975_Epitope_Rep2 1281.60701100801 1281.6059099358602 42.701 2 -0.3683363612241491 0.0959960817925799 0.9438714419765777 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|0|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|32'] 6572 20003 APVTQIGFEAP True PC9_epitope_Rep3 1128.5815245361598 1128.5804299358601 82.187 2 -0.368424348169702 0.0960102149691277 0.9438714419765777 ['nc|ENSG00000147573|Q9BYV6-2|TRIM55'] 85322 15742 QLANEEIAQV True PC9_epitope_Rep5 1113.56660274801 1113.56550993586 65.551 2 -0.36844660283872005 0.0960102149691277 0.9438714419765777 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|5|fusion', 'FGFR3-TACC3|2|fusion', 'FGFR3-TACC3|9|fusion', 'FGFR3-TACC3|14|fusion', 'FGFR3-TACC3|6|fusion', 'FGFR3-TACC3|4|fusion', 'FGFR3-TACC3|1|fusion', 'FGFR3-TACC3|13|fusion', 'FGFR3-TACC3|3|fusion', 'FGFR3-TACC3|15|fusion', 'ENST00000484264.1_1_4:1746256-1746676:+|nuORF', 'ENSG00000013810|ENST00000313288|TACC3'] 71033 3960 MESRPPPPP True H1975_Epitope_Rep2 1006.4906013567798 1006.48950993586 20.298 2 -0.36850173981671336 0.09605932870410858 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 75171 12697 NNLKCKWAKCP True NCI_RA007_Epitope_Rep1 1303.6529327379499 1303.6518299358602 53.372 2 -0.3685041035776087 0.09605932870410858 0.9438714419765777 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|146|3|sense'] 75009 17619 NLYTIQTL True PC9_epitope_Rep5 964.5229470308799 964.52184993586 72.781 2 -0.368571406874511 0.09607513904921818 0.9438714419765777 ['ENSG00000049283|ENST00000268933|EPN3', 'nc|ENSG00000049283|Q9H201-2|EPN3', 'ENST00000512291.5_1_17:48613811-48618261:+|nuORF', 'ENST00000512379.5_1_17:48610205-48619515:+|nuORF'] 9818 23172 AYLIGSIGV True PC9_epitope_Rep1 891.50656869075 891.5060249679301 93.925 1 -0.3687180863924414 0.09614173779208059 0.9438714419765777 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3', 'NAV3|p.Q1935E|2|0.1|ENSG00000067798|chr12:78188260-78188260|C/G|missense_variant', 'ENST00000552300.1_1_12:78574665-78583766:+|nuORF'] 54064 19133 KYLVIGDLLF True NCI_RA007_Epitope_Rep1 1179.69034670915 1179.68924993586 78.563 2 -0.36879372104965585 0.09614173779208059 0.9438714419765777 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 57871 13290 LEQERQRNFEK True H1975_Epitope_Rep3 1475.7480893506297 1475.74698993586 56.377 2 -0.3688193698001169 0.09617503541633873 0.9438714419765777 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 45175 6765 IREEERYPP True H1975_Epitope_Rep2 1187.5934862021898 1187.5918349037902 30.937 3 -0.368901859134298 0.09624331036412606 0.9438714419765777 ['nc|ENSG00000005884|P26006-1|ITGA3'] 86199 5929 QPVKLQEA True PC9_epitope_Rep5 911.5076313199099 911.50652993586 27.801 2 -0.3690122991809461 0.09632907186204726 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 36278 12577 GVGLSSYL True H1975_Epitope_Rep2 794.4174193331801 794.4168749679301 53.472 1 -0.369026394497365 0.09634487583071004 0.9438714419765777 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 4909 14968 ALGPRSASLLS True PC9_epitope_Rep6 1070.6084079903399 1070.60730993586 69.584 2 -0.3691902360620416 0.0963606792466029 0.9438714419765777 ['ENSG00000213654|ENST00000375040|GPSM3'] 12230 5646 DIQLLTHNDP True H1975_Epitope_Rep2 1164.5775017848803 1164.57640993586 26.718 2 -0.36921358524167824 0.09637479670531451 0.9438714419765777 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 18540 5667 EKSLHFAHLK True NCI_RA007_Epitope_Rep5 1208.6665915728001 1208.66494490379 28.486 3 -0.3692368461177881 0.09637479670531451 0.9438714419765777 ['ENST00000559905.5_3_15:49912372-49912896:-|nuORF', 'ENST00000561064.5_2_15:49907413-49912956:-|nuORF'] 69237 5200 LVNGYRCICPP True NCI_RA007_Epitope_Rep4 1233.5998345359299 1233.59818490379 26.534 3 -0.369276193096546 0.09638722764312943 0.9438714419765777 ['nc|ENSG00000101384|P78504-2|JAG1', 'ENSG00000101384|ENST00000254958|JAG1'] 89931 13729 RFVEKYTEL True PC9_epitope_Rep5 1183.62372370131 1183.62208490379 57.833 3 -0.3692904733925511 0.09638722764312943 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 119704 20366 VETDQRKM True PC9_epitope_Rep1 1005.4913296327699 1005.49022993586 83.162 2 -0.3692922157705427 0.09638722764312943 0.9438714419765777 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 83396 10241 QATREYTL True PC9_epitope_Rep1 980.4927095317599 980.49160993586 44.273 2 -0.36940176137859493 0.09643631531090438 0.9438714419765777 ['KDM5C|p.E386Q|2|0.32|ENSG00000126012|chrX:53211873-53211873|C/G|missense_variant', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 116418 7309 TWNRLWRWRHQ True NCI_RA007_Epitope_Rep1 1637.84399585449 1637.84288993586 32.422 2 -0.3694028784283096 0.09643631531090438 0.9438714419765777 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF'] 55373 20153 LASNVIC[Carbamidomethyl]P True PC9_epitope_Rep5 872.44258881463 872.44203496793 82.567 1 -0.3694308020291055 0.09645042839657282 0.9438714419765777 ['OR9G1|p.A215Gfs*50|1|0.15|ENSG00000174914|chr11:56701027-56701028|-/T|frameshift_variant', 'ENSG00000174914|ENST00000642097|OR9G1'] 66128 9758 LSPASPTDPP True PC9_epitope_Rep1 980.48147614172 980.48036993586 42.393 2 -0.3694625935090992 0.09645042839657282 0.9438714419765777 ['ENST00000540839.7_3_16:67563547-67572402:+|nuORF'] 6938 18837 AQLPALWKA True PC9_epitope_Rep3 996.5756513100799 996.57454993586 77.679 2 -0.36954923152557867 0.09646622720358099 0.9438714419765777 ['ENSG00000105612|ENST00000222219|DNASE2', 'nc|ENSG00000105612|O00115-2|DNASE2', 'ENST00000588777.1_1_19:12986806-12989487:-|nuORF'] 21651 7395 ERTSFNYAM-[Oxidation] True PC9_epitope_Rep4 1133.4811592523297 1133.48006993586 35.792 2 -0.36956890518034075 0.09648033850296366 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 35914 19304 GVAIPLPGV True PC9_epitope_Rep6 821.50108938749 821.49998993586 86.9 2 -0.3695693102979319 0.09648033850296366 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 48401 19392 KEDKLFRKKRR True PC9_epitope_Rep4 1502.9157638124195 1502.91412490379 82.701 3 -0.3695903181372902 0.09653110466132811 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B'] 22291 5438 ETEANNQKK True NCI_RA007_Epitope_Rep3 1060.5149015283198 1060.51380993586 28.401 2 -0.3696313668445528 0.09656269669207637 0.9438714419765777 ['UBA2|p.H503Q|1|0.24|ENSG00000126261|chr19:34464036-34464036|C/A|missense_variant'] 111869 11051 TLRLRRQPKYP True PC9_epitope_Rep4 1426.8521009267 1426.85044490379 50.283 3 -0.36965598821544987 0.09656269669207637 0.9438714419765777 ['ENSG00000198242|ENST00000422514|RPL23A', 'ENST00000416139.1_1_1:212482446-212482779:-|nuORF', 'ENST00000582736.1_1_17:27047023-27047984:+|nuORF'] 87094 9370 QSEPENPSL True H1975_Epitope_Rep2 999.45090428943 999.44980993586 41.003 2 -0.3696884950695537 0.09659428651351445 0.9438714419765777 ['nc|ENSG00000012048|P38398-6|BRCA1', 'nc|ENSG00000012048|P38398-5|BRCA1', 'nc|ENSG00000012048|P38398-3|BRCA1', 'BRCA1|p.E1257Gfs*9|1|0.28|ENSG00000012048|chr17:43091760-43091761|CT/-|frameshift_variant', 'ENSG00000012048|ENST00000357654|BRCA1', 'nc|ENSG00000012048|P38398-7|BRCA1', 'nc|ENSG00000012048|P38398-8|BRCA1', 'nc|ENSG00000012048|P38398-4|BRCA1'] 99832 13722 SLGVYNCWEF True PC9_epitope_Rep1 1216.5222954078797 1216.52118993586 57.63 2 -0.36970643659670055 0.09659428651351445 0.9438714419765777 ['ENSG00000106404|ENST00000308344|CLDN15'] 45466 5919 ISEIESNRSFS True H1975_Epitope_Rep3 1267.60444480871 1267.60334993586 27.776 2 -0.3697709450410849 0.0966275634189409 0.9438714419765777 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 117159 10905 TYSTEPNNL True PC9_epitope_Rep1 1037.46655435357 1037.46597496793 46.83 1 -0.3698696708819076 0.09666083916083916 0.9438714419765777 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 3560 17429 AGNLTDLPNL True PC9_epitope_Rep2 1026.53457434374 1026.53346993586 72.293 2 -0.370032153300758 0.09674656037481862 0.9438714419765777 ['TMEM140|p.R177Gfs*2|1|0.09|ENSG00000146859|chr7:135164967-135164968|GA/-|frameshift_variant', 'ENSG00000146859|ENST00000275767|TMEM140'] 100314 6204 SLMDHFHPP True H1975_Epitope_Rep2 1079.48585032951 1079.48474993586 28.837 2 -0.37004901458203154 0.09677814100659056 0.9438714419765777 ['ENST00000555842.1_2_14:99958333-99958432:+|nuORF'] 81398 11735 PPVPLPAPS True PC9_epitope_Rep4 873.49600400705 873.49490993586 52.899 2 -0.37005289970776567 0.09677814100659056 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 7703 8832 ASQNYRRV True NCI_RA007_Epitope_Rep2 992.5151763118398 992.51406993586 39.004 2 -0.3701394464502097 0.09681141178938536 0.9438714419765777 ['ENST00000545225.5_2_17:40994722-40994797:+|nuORF'] 128956 19150 VSVLLTVKP True PC9_epitope_Rep1 954.61136811246 954.61026993586 78.454 2 -0.3701816133118138 0.09682212278003076 0.9438714419765777 ['PXDNL|p.Q502L|2|0.11|ENSG00000147485|chr8:51447024-51447024|T/A|missense_variant'] 40328 20928 HRRVRLHRHG True NCI_RA007_Epitope_Rep4 1322.76568596414 1322.7645899358602 90.694 2 -0.3701890235863606 0.09682212278003076 0.9438714419765777 ['ENSG00000178184|ENST00000353265|PARD6G'] 126370 11557 VPLC[Carbamidomethyl]ILYEK True H1975_Epitope_Rep1 1133.61546779616 1133.6143699358602 49.44 2 -0.3701971299720782 0.09682212278003076 0.9438714419765777 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 117591 16576 VAGPSFETV True PC9_epitope_Rep5 905.44944773745 905.4488949679301 68.765 1 -0.37019784036327535 0.09682212278003076 0.9438714419765777 ['ENSG00000198805|ENST00000361505|PNP', 'ENST00000556754.1_1_14:20943209-20944757:+|nuORF', 'ENST00000554056.5_1_14:20942916-20944757:+|nuORF'] 39040 5630 HKQRVIVML True NCI_RA007_Epitope_Rep3 1122.6695687782599 1122.6679349037902 29.137 3 -0.37021746278286516 0.09683452482914125 0.9438714419765777 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 67708 15473 LTGFVTHTHP True PC9_epitope_Rep1 1108.56654317836 1108.5654499358602 64.338 2 -0.3702195214071457 0.09683452482914125 0.9438714419765777 ['ENST00000462630.5_1_20:2637388-2638937:+|nuORF'] 20576 9684 EQEEKEDEDP True H1975_Epitope_Rep2 1246.4837205393399 1246.4826299358601 42.231 2 -0.37023183213793254 0.09683452482914125 0.9438714419765777 ['ENSG00000198483|ENST00000355594|ANKRD35'] 119073 16360 VEHLFLYLQRE True H1975_Epitope_Rep1 1445.7666995368897 1445.76560993586 68.289 2 -0.3704285896636786 0.09688526882472209 0.9438714419765777 ['ENST00000425348.1_1_X:53483765-53483951:-|nuORF'] 125128 19347 VLPNRPFGLF True PC9_epitope_Rep5 1158.6549642599398 1158.65386993586 79.464 2 -0.37048895641422164 0.09689936029643094 0.9438714419765777 ['ENSG00000005187|ENST00000289416|ACSM3'] 134032 19958 WQDEFSHIM True PC9_epitope_Rep3 1191.5018943164698 1191.5007899358602 82.013 2 -0.3704932640719295 0.09689936029643094 0.9438714419765777 ['ENSG00000151876|ENST00000281623|FBXO4', 'ENST00000505566.1_1_5:41939508-41941380:+|nuORF'] 37953 4396 HEERERVRYF True H1975_Epitope_Rep3 1419.7007452353898 1419.6991049037902 22.03 3 -0.37054199476980226 0.09693262256401293 0.9438714419765777 ['ENSG00000152404|ENST00000282251|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 45919 17011 ISRTPPRRSEP True PC9_epitope_Rep1 1294.7105816430999 1294.7094899358601 70.255 2 -0.37056313664443663 0.09697658161481999 0.9438714419765777 ['ENSG00000140854|ENST00000379661|KATNB1', 'ENST00000566611.5_1_16:57786940-57790081:+|nuORF'] 90128 6617 RGRWWDAV True PC9_epitope_Rep4 1044.5253470727198 1044.52424993586 32.612 2 -0.3705651206938326 0.09697658161481999 0.9438714419765777 ['ENST00000484252.5_1_2:128396858-128398238:-|nuORF'] 68988 17671 LVGPVLGAA True PC9_epitope_Rep1 795.4854393233499 795.48434993586 72.766 2 -0.3705734691046641 0.09697658161481999 0.9438714419765777 ['ADAM9-RNF170|1|fusion', 'ADAM9-HTRA4|1|fusion', 'nc|ENSG00000168615|Q13443-2|ADAM9', 'ENSG00000168615|ENST00000487273|ADAM9'] 55344 8248 LASGKLVE True PC9_epitope_Rep1 815.47526856247 815.47416993586 36.56 2 -0.37060119134976255 0.09697658161481999 0.9438714419765777 ['ENSG00000164609|ENST00000297151|SLU7', 'ENST00000297151.8_1_5:159835702-159839515:-|nuORF'] 35432 14016 GTDSSLTAVS True PC9_epitope_Rep6 936.44000525256 936.43890993586 65.767 2 -0.3706042296641143 0.09697658161481999 0.9438714419765777 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 57783 15728 LEPDQEVVT True PC9_epitope_Rep2 1028.50260550912 1028.5015099358602 65.768 2 -0.3706468969289807 0.09699066792492397 0.9438714419765777 ['ENST00000567073.2_1_16:33123771-33127908:-|nuORF'] 112423 2636 TNKKEVDENK True NCI_RA007_Epitope_Rep4 1203.6095301891498 1203.60787490379 14.761 3 -0.3706487139846481 0.09699066792492397 0.9438714419765777 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant'] 3283 12144 AGGFVYTY True H1975_Epitope_Rep2 876.40176926904 876.40122496793 51.796 1 -0.37067778884309094 0.09700644845604041 0.9438714419765777 ['ENSG00000189091|ENST00000302516|SF3B3', 'nc|ENSG00000189091|Q15393-3|SF3B3', 'ENST00000562722.1_1_16:70597761-70599451:+|nuORF'] 77882 12517 PAGSIISLNAA True PC9_epitope_Rep1 1012.55530978832 1012.55420993586 53.017 2 -0.3706888906314122 0.09702222843562142 0.9438714419765777 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 12964 10961 DLPEYYSW True H1975_Epitope_Rep2 1071.45492704071 1071.45382993586 47.19 2 -0.3707054478038197 0.09703800786369594 0.9438714419765777 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF'] 13720 13685 DQILTALA True H1975_Epitope_Rep3 843.4701831820299 843.46963496793 57.934 1 -0.370804547593319 0.09708534283916964 0.9438714419765777 ['ENSG00000226761|ENST00000533467|TAS2R46', 'ENSG00000212126|ENST00000506868|TAS2R50', 'ENSG00000256436|ENST00000390675|TAS2R31', 'ENSG00000255374|ENST00000531678|TAS2R43', 'ENSG00000256188|ENST00000539585|TAS2R30'] 23558 11624 EYAKIEETM True PC9_epitope_Rep5 1112.5059766374 1112.5048699358601 49.707 2 -0.37089192234559676 0.09708534283916964 0.9438714419765777 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 67075 13908 LTCIAFVMP True H1975_Epitope_Rep2 993.50274626361 993.50164993586 58.644 2 -0.37092451931044884 0.09708534283916964 0.9438714419765777 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1', 'ENST00000492943.1_1_1:100177041-100181213:-|nuORF'] 81397 13037 PPVPLPAPS True PC9_epitope_Rep3 873.49600400705 873.49490993586 55.173 2 -0.3710121885292338 0.09712927856306676 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 129108 11256 VTAWEWVGP True PC9_epitope_Rep6 1043.50763131991 1043.50652993586 54.305 2 -0.37103489035314224 0.09712927856306676 0.9438714419765777 ['ENST00000477478.6_2_17:19247025-19261261:-|nuORF'] 9511 17264 AWNPKYELF True PC9_epitope_Rep5 1166.5760452329 1166.5744049037899 71.416 3 -0.3710444651089806 0.09712927856306676 0.9438714419765777 ['ENSG00000164363|ENST00000324642|SLC6A18'] 29189 16832 FVAGIDFK True PC9_epitope_Rep5 895.4803539429099 895.47924993586 69.753 2 -0.3710555353815953 0.09712927856306676 0.9438714419765777 ['BOLL|p.G38A|1|0.13|ENSG00000152430|chr2:197781738-197781738|C/G|missense_variant'] 73972 12024 NHNLTEKLL True PC9_epitope_Rep5 1080.5927579262 1080.5916699358602 51.244 2 -0.3710736532978075 0.09712927856306676 0.9438714419765777 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1'] 118421 9334 VDNQRSRLP True NCI_RA007_Epitope_Rep1 1083.57850484439 1083.57740993586 40.301 2 -0.37113543804516597 0.09714505363944509 0.9438714419765777 ['nc|ENSG00000275395|Q9Y6R7|FCGBP', 'ENSG00000275395|ENST00000616721|FCGBP', 'FCGBP|p.V550I|1|0.63|ENSG00000275395|chr19:39924388-39924388|C/T|missense_variant'] 137630 13826 YLVSKASHIS True PC9_epitope_Rep1 1103.59750895347 1103.59640993586 58.024 2 -0.3711778940115508 0.09715403833050892 0.9438714419765777 ['ENSG00000145982|ENST00000274680|FARS2'] 129477 4967 VTESDLSR True NCI_RA007_Epitope_Rep5 905.44542498617 905.44432993586 25.808 2 -0.3712192058823591 0.09715403833050892 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'ENST00000460094.1_1_9:138758268-138774700:-|nuORF', 'ENST00000312405.10_1_9:138742295-138774724:-|nuORF'] 100295 6979 SLLTVNKDQKL True NCI_RA007_Epitope_Rep4 1257.7292513990099 1257.72814993586 33.471 2 -0.37128387469394314 0.09715403833050892 0.9438714419765777 ['ENSG00000162402|ENST00000294383|USP24'] 4726 13584 ALDTPSLR True PC9_epitope_Rep2 871.4763311916299 871.4752299358599 57.542 2 -0.37128719726255993 0.09715403833050892 0.9438714419765777 ['ENSG00000273604|ENST00000621654|EPOP'] 88956 7675 REDLSRLV True H1975_Epitope_Rep3 986.5508931142199 986.54978993586 34.505 2 -0.3713035093071255 0.09715403833050892 0.9438714419765777 ['ENSG00000185043|ENST00000328649|CIB1', 'nc|ENSG00000185043|Q99828-2|CIB1'] 85550 21023 QLLDTSYLL True PC9_epitope_Rep2 1064.57537652656 1064.5748749679299 86.318 1 -0.3713537198978289 0.09715792967317065 0.9438714419765777 ['ENSG00000254470|ENST00000532090|AP5B1', 'ENST00000316846.2_11:65545618-65547282:-|nuORF'] 18077 5933 EIKHWRKMLWR True NCI_RA007_Epitope_Rep1 1581.87145647229 1581.86925987172 27.125 4 -0.37136078669944794 0.09715792967317065 0.9438714419765777 ['ENSG00000141371|ENST00000269127|CHCT1'] 33254 18419 GLAISQLVDV True PC9_epitope_Rep6 1013.57571087973 1013.5746099358599 83.494 2 -0.3713961020229543 0.09715792967317065 0.9438714419765777 ['ENSG00000169684|ENST00000299565|CHRNA5'] 3767 5664 AGTRRSLAGDP True H1975_Epitope_Rep1 1099.57341946395 1099.5723299358601 26.856 2 -0.3714037283289228 0.09715792967317065 0.9438714419765777 ['BAHD1|p.R147L|1|0.39|ENSG00000140320|chr15:40458904-40458904|G/T|missense_variant'] 36787 15638 GVPHPIDLL True PC9_epitope_Rep2 959.54401682863 959.54290993586 65.427 2 -0.3714152331257228 0.09715792967317065 0.9438714419765777 ['TRPV4|p.N81H|1|0.25|ENSG00000111199|chr12:109814556-109814556|T/G|missense_variant'] 110792 20418 TKQNSVLLL True PC9_epitope_Rep2 1014.6073453611799 1014.60624993586 83.965 2 -0.371426086461525 0.09715792967317065 0.9438714419765777 ['ENSG00000172167|ENST00000305949|MTBP', 'ENST00000522449.1_1_8:121475935-121483203:+|nuORF'] 25859 7719 FGGLGGGS True NCI_RA007_Epitope_Rep5 650.30238958094 650.30184496793 36.391 1 -0.3714447008535911 0.09715792967317065 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 30675 10414 GALKLAEV True PC9_epitope_Rep5 799.4803539429099 799.47924993586 45.042 2 -0.3715095059767907 0.09715792967317065 0.9438714419765777 ['LRRC71|p.R305G|1|0.16|ENSG00000160838|chr1:156927921-156927921|C/G|missense_variant', 'nc|ENSG00000160838|Q8N4P6-2|LRRC71', 'ENSG00000160838|ENST00000337428|LRRC71'] 95829 15300 SDIEIENGF True H1975_Epitope_Rep1 1022.4556553166999 1022.45454993586 64.12 2 -0.37154191319025714 0.09716860840858675 0.9438714419765777 ['CFHR4|p.T541Kfs*30|2|0.26|ENSG00000134365|chr1:196918294-196918294|C/-|frameshift_variant', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4', 'ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4'] 95960 10462 SEAAAASAFLA True H1975_Epitope_Rep1 1007.4923751785899 1007.49126993586 45.197 2 -0.3715723753832515 0.09716860840858675 0.9438714419765777 ['ENSG00000111145|ENST00000228741|ELK3'] 84260 8279 QEWEEKIQEQE True H1975_Epitope_Rep2 1474.65760258038 1474.6559549037902 36.796 3 -0.3716008079373193 0.09716860840858675 0.9438714419765777 ['nc|ENSG00000273756|P0DX02|GOLGA6L26', 'ENSG00000273976|ENST00000614055|GOLGA6L1', 'ENSG00000277322|ENST00000619213|GOLGA6L6', 'ENSG00000277865|ENST00000622895|GOLGA6L22'] 15482 8227 EAQCCSPTV True NCI_RA007_Epitope_Rep5 936.3681032656 936.36700993586 38.324 2 -0.3716266417280446 0.09716860840858675 0.9438714419765777 ['ENST00000514938.1_1_22:50943492-50943879:-|nuORF', 'ENST00000474879.6_3_22:50943492-50943863:-|nuORF'] 55702 4768 LDDENDSLRY True NCI_RA007_Epitope_Rep2 1238.54151019898 1238.54040993586 23.178 2 -0.37164545359867485 0.09718098298808817 0.9438714419765777 ['ENSG00000134042|ENST00000398439|MRO', 'nc|ENSG00000134042|Q9BYG7-5|MRO'] 82491 21444 PVELGTVAEL True PC9_epitope_Rep4 1026.5597264624198 1026.5586299358602 90.665 2 -0.37166012943926624 0.09718098298808817 0.9438714419765777 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'nc|ENSG00000011143|Q9NXB0-2|MKS1'] 57689 7204 LENALQKA True H1975_Epitope_Rep3 885.49198125577 885.49088993586 32.685 2 -0.3716707789240493 0.09718098298808817 0.9438714419765777 ['CON__Q0VBK2'] 32745 14205 GHYEVVQYL True PC9_epitope_Rep6 1106.53965972418 1106.53856993586 66.526 2 -0.37170593218684184 0.09719675137542573 0.9438714419765777 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1'] 82975 22171 PYAVLLEAL True PC9_epitope_Rep1 987.5640835668698 987.56298993586 90.098 2 -0.37174994286140606 0.0972649154673746 0.9438714419765777 ['ENSG00000111652|ENST00000543155|COPS7A'] 12715 20853 DLFRGRHYWVP True PC9_epitope_Rep1 1444.7364024681199 1444.7353099358602 85.037 2 -0.3718227262963352 0.09729814695146445 0.9438714419765777 ['ENSG00000101473|ENST00000217455|ACOT8', 'ENST00000484783.1_1_20:44472824-44485954:-|nuORF'] 55355 7919 LASLHEAP True PC9_epitope_Rep2 836.43921740692 836.43812993586 35.826 2 -0.37186448275707584 0.09732797764582606 0.9438714419765777 ['ENST00000429604.5_1_19:53578422-53594911:-|nuORF', 'ENST00000596966.5_1_19:53589336-53594911:-|nuORF', 'ENST00000355147.9_2_19:53578422-53594911:-|nuORF', 'ENST00000597112.5_1_19:53589473-53594911:-|nuORF'] 12634 6063 DLEGHHRHTVY True H1975_Epitope_Rep3 1362.6428960061 1362.6412649037902 28.332 3 -0.3718785977396448 0.09732797764582606 0.9438714419765777 ['ENSG00000081479|ENST00000649046|LRP2'] 120073 20628 VFGGDYIF True PC9_epitope_Rep2 916.4330693973199 916.43252496793 84.779 1 -0.3718839817917352 0.09732797764582606 0.9438714419765777 ['nc|ENSG00000116704|Q9NTN3-2|SLC35D1', 'ENSG00000116704|ENST00000235345|SLC35D1'] 14668 20471 DVNLAYEIL True PC9_epitope_Rep4 1048.5440763982801 1048.5429699358601 86.888 2 -0.3719775346938615 0.09734374181379997 0.9438714419765777 ['GTF2E1-RABL3|1|fusion', 'ENSG00000153767|ENST00000283875|GTF2E1'] 57182 7055 LEESNMELEE True H1975_Epitope_Rep3 1221.5070988362102 1221.5060099358602 32.102 2 -0.37198454640505363 0.09735270492089547 0.9438714419765777 ['ENST00000487055.1_1_5:132036305-132039285:-|nuORF', 'nc|ENSG00000131437|Q9Y496|KIF3A', 'ENSG00000131437|ENST00000403231|KIF3A'] 59442 19872 LGMEHCDTL True PC9_epitope_Rep3 1017.4259524948899 1017.42484993586 81.674 2 -0.3719846759492768 0.09735270492089547 0.9438714419765777 ['ENSG00000130176|ENST00000252456|CNN1', 'nc|ENSG00000130176|P51911-2|CNN1', 'FZR1-CNN1|1|fusion'] 87706 6703 QVEAGAER True H1975_Epitope_Rep3 858.4195445914999 858.4184499358599 30.737 2 -0.37199505606629685 0.09735270492089547 0.9438714419765777 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 64830 5507 LSAGKVQG True NCI_RA007_Epitope_Rep4 758.42865272322 758.42754993586 27.774 2 -0.3720025124497478 0.09735270492089547 0.9438714419765777 ['ENSG00000218336|ENST00000511685|TENM3'] 118448 16627 VDQIRVSVL True PC9_epitope_Rep2 1027.6025943339098 1027.6014899358602 69.201 2 -0.37202568212012466 0.09735270492089547 0.9438714419765777 ['ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 109286 12386 TGDTIALNIIK True NCI_RA007_Epitope_Rep1 1157.66558851329 1157.66448993586 52.154 2 -0.3720785438852839 0.09738592906909739 0.9438714419765777 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 10250 12590 CFSCAQCK True NCI_RA007_Epitope_Rep5 888.32921565908 888.32810993586 55.081 2 -0.372197901513524 0.09743321110529073 0.9438714419765777 ['ENSG00000139174|ENST00000345127|PRICKLE1'] 130224 11248 VTSKGGAPPP True PC9_epitope_Rep4 909.4919812557698 909.49088993586 51.039 2 -0.3721984061370332 0.09743321110529073 0.9438714419765777 ['nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 37917 11370 HEDVNVGSI True PC9_epitope_Rep2 968.45632402304 968.45522993586 49.056 2 -0.37225115492388444 0.09743321110529073 0.9438714419765777 ['ENSG00000133302|ENST00000265140|SLF1'] 47124 14345 IVYQPHLISV True PC9_epitope_Rep5 1167.66519459047 1167.6640899358601 60.178 2 -0.37225976829443763 0.0974455677195188 0.9438714419765777 ['nc|ENSG00000165240|Q04656-5|ATP7A', 'ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A'] 31404 6879 GEDEPQLAP True H1975_Epitope_Rep2 954.4294405688598 954.42834993586 31.38 2 -0.3722622248923085 0.0974455677195188 0.9438714419765777 ['ENSG00000134115|ENST00000446702|CNTN6'] 17800 18449 EHVQLLQVI True PC9_epitope_Rep4 1077.61824439805 1077.6171499358602 79.034 2 -0.3722903245708161 0.0974455677195188 0.9438714419765777 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 43720 19971 IIRRRADNI True PC9_epitope_Rep1 1125.6730739355698 1125.67196993586 81.643 2 -0.37235211422379605 0.09751370604462758 0.9438714419765777 ['ENST00000330137.11_1_17:57189456-57189504:-|nuORF'] 7738 5713 ASSRNLKKFI True NCI_RA007_Epitope_Rep3 1162.6822416369398 1162.68058490379 29.447 3 -0.37236235280482666 0.097529463116543 0.9438714419765777 ['AOAH|p.H406Tfs*33|1|0.56|ENSG00000136250|chr7:36540409-36540409|G/-|frameshift_variant', 'nc|ENSG00000136250|P28039-2|AOAH', 'ENSG00000136250|ENST00000617537|AOAH'] 127104 10300 VQATEIHNI True PC9_epitope_Rep3 1023.5349086969098 1023.53380993586 44.566 2 -0.37256933454597774 0.09757843462471848 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 100891 7293 SLSKASMAI True NCI_RA007_Epitope_Rep3 906.48445334718 906.48334993586 35.796 2 -0.372588649498391 0.09757843462471848 0.9438714419765777 ['MYO15A|p.T132M|1|0.45|ENSG00000091536|chr17:18119195-18119195|C/T|missense_variant'] 76556 19397 NTDRSWLI True PC9_epitope_Rep1 1003.5086939490699 1003.50758993586 79.422 2 -0.3726072913816239 0.09759418974126191 0.9438714419765777 ['ENSG00000118997|ENST00000312428|DNAH7', 'DNAH7|p.D2288Efs*7|1|0.18|ENSG00000118997|chr2:195864791-195864791|A/-|frameshift_variant'] 96069 7557 SECKELWQEGP True H1975_Epitope_Rep2 1304.5707021522799 1304.5696099358602 34.021 2 -0.3726442308154052 0.09760994430768694 0.9438714419765777 ['TRPC3|p.L531Q|1|0.07|ENSG00000138741|chr4:121910354-121910354|A/T|missense_variant'] 78477 5956 PDDLDGINP True H1975_Epitope_Rep2 954.42944056886 954.42834993586 27.891 2 -0.3726560709712674 0.09761547323953497 0.9438714419765777 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'CDK5RAP2|p.M736*|1|0.22|ENSG00000136861|chr9:120458619-120458619|T/-|frameshift_variant'] 99592 10142 SLFLEYAKNP True H1975_Epitope_Rep3 1180.6128246644398 1180.61172993586 44.055 2 -0.37266254391707654 0.09761547323953497 0.9438714419765777 ['nc|ENSG00000116748|P23109-2|AMPD1', 'ENSG00000116748|ENST00000520113|AMPD1'] 82181 6934 PTEPQPYTNRR True H1975_Epitope_Rep3 1357.67386178121 1357.67276993586 31.633 2 -0.3726738664912066 0.09761547323953497 0.9438714419765777 ['nc|ENSG00000141644|Q9UIS9-8|MBD1', 'nc|ENSG00000141644|Q9UIS9-2|MBD1'] 118029 19788 VATDFFTVL True NCI_RA007_Epitope_Rep1 1011.5276980581499 1011.52717496793 81.162 1 -0.372728512805784 0.09761547323953497 0.9438714419765777 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'nc|ENSG00000242802|O43299-3|AP5Z1', 'ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF'] 108 11053 AAATATFAAA True PC9_epitope_Rep5 864.4341320264798 864.43302993586 47.502 2 -0.3727396145076641 0.09761547323953497 0.9438714419765777 ['ENSG00000119888|ENST00000263735|EPCAM', 'ENST00000474691.1_1_2:47596644-47600714:+|nuORF'] 8777 11987 AVELQEKV True PC9_epitope_Rep4 914.5072969667399 914.50618993586 53.9 2 -0.3727903399840569 0.09761547323953497 0.9438714419765777 ['ENST00000492741.5_1_13:20346451-20346499:-|nuORF'] 61960 19974 LLLPFVVSCI True PC9_epitope_Rep3 1102.64603936902 1102.64494993586 82.076 2 -0.37281537627552475 0.09761547323953497 0.9438714419765777 ['nc|ENSG00000103534|Q6UXY8-4|TMC5', 'ENST00000567478.5_1_16:19467998-19503571:+|nuORF', 'nc|ENSG00000103534|Q6UXY8-3|TMC5', 'nc|ENSG00000103534|Q6UXY8-2|TMC5', 'ENSG00000103534|ENST00000542583|TMC5'] 138721 14379 YRWRRRSHQEP True PC9_epitope_Rep1 1569.8025249653297 1569.8014299358601 60.132 2 -0.3728647956603639 0.09763122523434636 0.9438714419765777 ['ENSG00000184371|ENST00000329608|CSF1', 'nc|ENSG00000184371|P09603-2|CSF1', 'nc|ENSG00000184371|P09603-3|CSF1'] 16945 5452 EGESWRESAR True NCI_RA007_Epitope_Rep2 1205.5425132584899 1205.5414099358602 25.828 2 -0.37291191280615005 0.0976644323418517 0.9438714419765777 ['ENSG00000141696|ENST00000393928|P3H4'] 546 4244 AAQKGNYRFMK True NCI_RA007_Epitope_Rep4 1312.6710253302397 1312.66936490379 22.645 3 -0.37297781346731496 0.09771509364799526 0.9438714419765777 ['INVS|p.A531Ffs*4|1|0.1|ENSG00000119509|chr9:100272883-100272884|GC/-|frameshift_variant', 'nc|ENSG00000119509|Q9Y283-2|INVS', 'ENSG00000119509|ENST00000262457|INVS'] 67289 16769 LTDPDIHVL True PC9_epitope_Rep2 1021.5444107514501 1021.54330993586 69.75 2 -0.3730453889402545 0.09774659196034281 0.9438714419765777 ['nc|ENSG00000091157|Q9Y4E6-2|WDR7', 'ENSG00000091157|ENST00000254442|WDR7'] 16995 13281 EGIITIKQNLD True H1975_Epitope_Rep3 1242.6819668534201 1242.68086993586 56.342 2 -0.37310886788409714 0.09774659196034281 0.9438714419765777 ['CDH9|p.V331I|1|0.4|ENSG00000113100|chr5:26903645-26903645|C/T|missense_variant'] 53695 7854 KYDCFLHP True PC9_epitope_Rep1 1021.46913763621 1021.46804993586 35.037 2 -0.3731108602518847 0.0977623402918383 0.9438714419765777 ['nc|ENSG00000108799|Q92800-5|EZH1', 'nc|ENSG00000108799|Q92800-4|EZH1', 'nc|ENSG00000106462|Q15910-5|EZH2', 'nc|ENSG00000108799|Q92800-3|EZH1', 'nc|ENSG00000106462|Q15910-3|EZH2', 'nc|ENSG00000106462|Q15910-4|EZH2', 'nc|ENSG00000106462|Q15910|EZH2', 'ENSG00000108799|ENST00000428826|EZH1', 'nc|ENSG00000108799|Q92800-2|EZH1', 'ENST00000498186.5_1_7:148514900-148581332:-|nuORF', 'ENST00000591330.5_1_17:40855746-40879722:-|nuORF', 'ENST00000585912.5_1_17:40855746-40880959:-|nuORF', 'ENST00000586103.5_1_17:40855746-40880959:-|nuORF', 'ENST00000483012.1_1_7:148516133-148534012:-|nuORF'] 36609 22307 GVLKVFLENV True PC9_epitope_Rep5 1116.6542955536 1116.6531899358602 90.811 2 -0.37323684343636665 0.09779383530561664 0.9438714419765777 ['ENSG00000158406|ENST00000377727|H4C8', 'ENSG00000270882|ENST00000578186|H4C14', 'ENSG00000278705|ENST00000377745|H4C2', 'ENSG00000278637|ENST00000617569|H4C1', 'ENSG00000277157|ENST00000614247|H4C4', 'ENSG00000276966|ENST00000615164|H4C5', 'ENSG00000275126|ENST00000618305|H4C13', 'ENSG00000274618|ENST00000244537|H4C6', 'ENSG00000276180|ENST00000615353|H4C9', 'ENSG00000270276|ENST00000579512|H4C15', 'ENSG00000197837|ENST00000539745|H4C16', 'ENSG00000197238|ENST00000355057|H4C11', 'ENSG00000197061|ENST00000377803|H4C3', 'ENSG00000273542|ENST00000611927|H4C12'] 107074 14287 SYLTSASSL True PC9_epitope_Rep1 927.45492704071 927.45382993586 59.78 2 -0.3732806606853875 0.09779383530561664 0.9438714419765777 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 99528 17793 SLETLNSVP True PC9_epitope_Rep1 958.49712620586 958.49602993586 73.237 2 -0.3733110853061941 0.0978253281206367 0.9438714419765777 ['ENST00000468415.6_1_3:59035346-59035502:-|nuORF'] 45531 9630 ISFQTQTVI True H1975_Epitope_Rep3 1035.5600608155898 1035.5589699358602 42.058 2 -0.3733338763574071 0.0978253281206367 0.9438714419765777 ['ENST00000584386.5_1_17:25958291-25974145:+|nuORF', 'nc|ENSG00000168961|O00182-5|LGALS9', 'nc|ENSG00000168961|O00182-3|LGALS9'] 3996 8496 AHFQDNLHS True PC9_epitope_Rep4 1067.47845644995 1067.47734993586 40.152 2 -0.3734520730318472 0.09787427135327585 0.9438714419765777 ['nc|ENSG00000160563|Q6P2C8-2|MED27', 'ENSG00000160563|ENST00000292035|MED27', 'nc|ENSG00000160563|Q6P2C8-4|MED27'] 62933 19203 LNCCFDPFIYY True H1975_Epitope_Rep1 1396.58318141228 1396.58208993586 80.019 2 -0.37347106083682136 0.09787427135327585 0.9438714419765777 ['ENSG00000147145|ENST00000614823|LPAR4'] 47720 19882 IYQEVWNLF True NCI_RA007_Epitope_Rep4 1210.60225998074 1210.60116993586 85.94 2 -0.37353220511566493 0.09789892503141141 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 68420 12483 LTTIGVLEEP True PC9_epitope_Rep1 1070.58594121026 1070.5848499358601 52.883 2 -0.37355517882647143 0.09789892503141141 0.9438714419765777 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2'] 25935 23345 FGQEELQANL True H1975_Epitope_Rep1 1147.5509526838698 1147.54984993586 97.035 2 -0.37362492737133984 0.09789892503141141 0.9438714419765777 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'NDRG3|p.G292Dfs*5|1|0.18|ENSG00000101079|chr20:36656516-36656516|C/-|frameshift_variant', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3'] 33327 19762 GLDQSLVSL True PC9_epitope_Rep5 930.5022115863 930.50110993586 81.058 2 -0.37365636179745565 0.09789892503141141 0.9438714419765777 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1'] 99921 7058 SLIDLTYISV True NCI_RA007_Epitope_Rep5 1122.6172413385402 1122.6161499358602 33.829 2 -0.37365724067145106 0.09789892503141141 0.9438714419765777 ['ENSG00000184022|ENST00000642090|OR2T10', 'OR2T10|p.V248Sfs*25|1|0.13|ENSG00000184022|chr1:248593027-248593027|C/-|frameshift_variant'] 127079 5042 VQADAPHGV True PC9_epitope_Rep3 892.44028003608 892.43918993586 24.482 2 -0.3736634873037829 0.09789892503141141 0.9438714419765777 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 106137 8438 SVPAQQSLVSA True NCI_RA007_Epitope_Rep3 1085.57168812845 1085.5705899358602 40.276 2 -0.37374195037073743 0.09794956810051479 0.9438714419765777 ['ENST00000302475.8_1_5:112362600-112362786:-|nuORF'] 15317 10779 EAIWCHQCT True H1975_Epitope_Rep2 1089.43718588493 1089.43608993586 46.492 2 -0.37386215819125346 0.09803510976163055 0.9438714419765777 ['ENSG00000283992|ENST00000317543|SLURP2', 'nc|ENSG00000180155|P0DP58-2|LYNX1'] 55343 12847 LASEVQAL True PC9_epitope_Rep2 829.4545331178898 829.45342993586 54.716 2 -0.3739232750315727 0.09805084893643011 0.9438714419765777 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.R2720Qfs*63|1|0.51|ENSG00000168477|chr6:32061470-32061471|GC/-|frameshift_variant', 'TNXB|p.P3212Lfs*4|1|0.45|ENSG00000168477|chr6:32052891-32052891|G/-|frameshift_variant', 'TNXB|p.T3316Qfs*58|1|0.15|ENSG00000168477|chr6:32050233-32050233|C/-|frameshift_variant', 'TNXB|p.G3470Afs*51|1|0.22|ENSG00000168477|chr6:32049359-32049359|C/-|frameshift_variant', 'TNXB|p.A1701Pfs*4|1|0.19|ENSG00000168477|chr6:32079049-32079049|G/-|frameshift_variant', 'ENST00000486148.1_1_6:32065519-32065975:-|nuORF'] 110990 21491 TLDEEDLVDSL True PC9_epitope_Rep1 1247.5768926481899 1247.57578993586 87.509 2 -0.3740639121555823 0.09806658756194597 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF', 'ECE1|p.V239Mfs*13|1|0.31|ENSG00000117298|chr1:21258737-21258740|AGAC/-|frameshift_variant'] 75285 19337 NPSDLSQIAI True PC9_epitope_Rep2 1056.54513902744 1056.5440499358601 79.753 2 -0.37410763248246615 0.09811208821887214 0.9438714419765777 ['ENST00000553891.5_1_14:73491454-73491541:-|nuORF'] 117489 6831 VAEKAGTF True PC9_epitope_Rep2 821.42831837005 821.4272299358599 31.68 2 -0.3741190194454623 0.09811208821887214 0.9438714419765777 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'nc|ENSG00000196655|Q9Y296-2|TRAPPC4'] 21833 11455 ESDVGVVVY True H1975_Epitope_Rep1 965.47057710485 965.47002496793 49.042 1 -0.3741795204075233 0.09811208821887214 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 15916 15348 EDRPGGHIVAE True PC9_epitope_Rep1 1178.5679997303398 1178.5669099358602 63.854 2 -0.37421065991928104 0.09811208821887214 0.9438714419765777 ['ENSG00000177679|ENST00000611745|SRRM3', 'nc|ENSG00000177679|A6NNA2|SRRM3', 'SRRM3|p.A145Pfs*62|1|0.56|ENSG00000177679|chr7:76260002-76260002|G/-|frameshift_variant'] 134221 19869 WRRETSRFRQQ True NCI_RA007_Epitope_Rep2 1548.8021906121598 1548.80108993586 82.285 2 -0.3742589850356335 0.09816272049971211 0.9438714419765777 ['ENSG00000089693|ENST00000203630|MLF2'] 54115 9555 KYMEDYHQF True PC9_epitope_Rep4 1259.52810906431 1259.5270099358602 44.369 2 -0.3743986131635945 0.09820821047856657 0.9438714419765777 ['ENSG00000118898|ENST00000345988|PPL'] 42544 16064 IESIWSNLF True H1975_Epitope_Rep3 1107.56006081559 1107.5589699358602 67.246 2 -0.37448335182638104 0.09820821047856657 0.9438714419765777 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.S2410Lfs*12|1|0.26|ENSG00000197653|chr12:123867998-123867998|C/-|frameshift_variant'] 99408 4072 SLEEEVDREKE True NCI_RA007_Epitope_Rep4 1361.63105347937 1361.6293949037902 21.935 3 -0.3744854824806557 0.09820821047856657 0.9438714419765777 ['nc|ENSG00000171804|Q6ZQQ6|WDR87', 'nc|ENSG00000171804|Q6ZQQ6-2|WDR87', 'ENSG00000171804|ENST00000447313|WDR87'] 13418 16743 DNLTQVINL True PC9_epitope_Rep6 1028.55022440788 1028.5496749679298 76.891 1 -0.37453818659821514 0.09820821047856657 0.9438714419765777 ['nc|ENSG00000100083|Q9UJY5-3|GGA1', 'nc|ENSG00000100083|Q9UJY5-2|GGA1', 'ENSG00000100083|ENST00000343632|GGA1', 'nc|ENSG00000100083|Q9UJY5-6|GGA1'] 130250 7331 VTSSEVWKR True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 34.874 2 -0.37456471519351814 0.09824139013922328 0.9438714419765777 ['nc|ENSG00000185186|P59037|LINC00313'] 120881 7612 VGDVFRGG True PC9_epitope_Rep6 805.4082516318099 805.40714993586 38.565 2 -0.3745921833192059 0.09827113972191692 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 71911 11368 MPQSGTGVSV True PC9_epitope_Rep5 961.45388149489 961.45333496793 48.723 1 -0.37461794717454727 0.09827113972191692 0.9438714419765777 ['ENSG00000115233|ENST00000409682|PSMD14'] 55939 21279 LDHIVTYLF True PC9_epitope_Rep3 1119.5964463243101 1119.5953499358602 87.145 2 -0.37466075929133164 0.09827113972191692 0.9438714419765777 ['ENSG00000130227|ENST00000252512|XPO7'] 45829 15793 ISPTGWNNV True PC9_epitope_Rep5 986.4821448480601 986.48104993586 65.735 2 -0.37470939255841484 0.09828515604556635 0.9438714419765777 ['nc|ENSG00000134955|Q8TED4-2|SLC37A2', 'ENSG00000134955|ENST00000403796|SLC37A2', 'nc|ENSG00000134955|Q8TED4-4|SLC37A2'] 106529 12960 SVVSGAVVAA True PC9_epitope_Rep1 858.4810822188999 858.47998993586 54.723 2 -0.3747550532804191 0.09828515604556635 0.9438714419765777 ['ENSG00000204592|ENST00000376630|HLA-E'] 122761 11285 VGVFTREEVR True PC9_epitope_Rep4 1190.64077074778 1190.6391149037902 51.186 3 -0.3748035052761112 0.0983149007431183 0.9438714419765777 ['nc|ENSG00000088826|Q9NWM0-2|SMOX', 'nc|ENSG00000088826|Q9NWM0-4|SMOX', 'ENSG00000088826|ENST00000305958|SMOX', 'nc|ENSG00000088826|Q9NWM0-6|SMOX'] 107880 3870 TASYAGPPPP True H1975_Epitope_Rep3 956.4603467743199 956.45924993586 20.002 2 -0.3748235813803436 0.0983149007431183 0.9438714419765777 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 72812 19119 NAINITSAL True PC9_epitope_Rep4 915.50254593947 915.50144993586 81.635 2 -0.3749094950526212 0.0983149007431183 0.9438714419765777 ['ENSG00000127990|ENST00000648936|SGCE', 'nc|ENSG00000127990|O43556-3|SGCE', 'nc|ENSG00000127990|O43556-4|SGCE'] 12259 7562 DIRPSRWYQFR True NCI_RA007_Epitope_Rep2 1522.7793299092598 1522.77769490379 34.039 3 -0.37493479718517736 0.09836380128384035 0.9438714419765777 ['ENSG00000011201|ENST00000262648|ANOS1'] 23160 8790 EVNYQELQEEY True H1975_Epitope_Rep2 1442.6201544424998 1442.6190499358602 38.774 2 -0.37496455997144423 0.09836380128384035 0.9438714419765777 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF'] 82331 10365 PTSAASLPP True NCI_RA007_Epitope_Rep5 839.4388830537499 839.43833496793 46.498 1 -0.37501920580039044 0.09839697186415253 0.9438714419765777 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L'] 102079 11704 SPPSQSVQL True PC9_epitope_Rep5 941.4818104948899 941.48070993586 50.017 2 -0.3750926746500812 0.09843014128728414 0.9438714419765777 ['ENSG00000121621|ENST00000263181|KIF18A'] 41183 6539 HYYSRQRGRRN True H1975_Epitope_Rep3 1491.7555747729098 1491.7539149037902 30.12 3 -0.3752174883038126 0.09844586698295861 0.9438714419765777 ['nc|ENSG00000212643|Q15695|ZRSR2P1'] 125315 24756 VLRVLRPLK True H1975_Epitope_Rep3 1092.74953335112 1092.74842993586 102.96 2 -0.37522451791451455 0.09845987476671376 0.9438714419765777 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 60601 11503 LISLDFRLHTP True H1975_Epitope_Rep1 1310.73467113262 1310.73356993586 49.231 2 -0.37523318355309626 0.09845987476671376 0.9438714419765777 ['OR2A25|p.S52F|1|0.32|ENSG00000221933|chr7:144074374-144074374|C/T|missense_variant'] 90591 20496 RKIIGMLIP True PC9_epitope_Rep1 1039.65760711223 1039.6565099358602 83.65 2 -0.37530311780569664 0.0984930407785956 0.9438714419765777 ['ENST00000409245.5_1_2:47143345-47143381:+|nuORF'] 114927 6438 TTEWGNVAT True PC9_epitope_Rep3 977.4454249861699 977.44432993586 29.789 2 -0.37534676921234267 0.09850704618389843 0.9438714419765777 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 43757 12444 IIWDAQAMP True H1975_Epitope_Rep2 1043.5110024481899 1043.5099099358602 52.954 2 -0.3753880918419541 0.09850704618389843 0.9438714419765777 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.A666Gfs*38|1|0.45|ENSG00000122728|chr9:32633585-32633586|-/T|frameshift_variant', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 111264 16569 TLGSALSL True PC9_epitope_Rep4 760.4330693973201 760.43252496793 71.709 1 -0.37540006930437675 0.0985227688926871 0.9438714419765777 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 12378 4428 DKDDKEDEKEK True NCI_RA007_Epitope_Rep4 1377.62596809893 1377.62431490379 23.394 3 -0.37544564839333433 0.09855593149394817 0.9438714419765777 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46'] 115682 21072 TVLATVLEL True PC9_epitope_Rep6 957.5746482505699 957.57354993586 93.877 2 -0.3755030851917805 0.0985682147154741 0.9438714419765777 ['ENSG00000176387|ENST00000326152|HSD11B2'] 56907 9458 LEDQAGTSLP True PC9_epitope_Rep3 1029.4978544818498 1029.4967499358602 41.325 2 -0.37550841208880875 0.0985682147154741 0.9438714419765777 ['ENST00000472415.1_1_X:153043961-153044491:+|nuORF'] 112643 10075 TPEQIEKIY True H1975_Epitope_Rep3 1119.5811901829898 1119.58008993586 43.792 2 -0.375515877801768 0.0985682147154741 0.9438714419765777 ['ENSG00000086288|ENST00000199447|NME8'] 80321 20646 PLFLAEPAL True PC9_epitope_Rep5 969.5535188831699 969.55242993586 84.468 2 -0.37558691983069037 0.09858221578919833 0.9438714419765777 ['ENSG00000152822|ENST00000282753|GRM1', 'ENST00000507907.1_1_6:146747775-146755929:+|nuORF', 'ENST00000492807.6_1_6:146720717-146755929:+|nuORF'] 55409 11710 LATATTTLTSL True PC9_epitope_Rep5 1091.6074049308302 1091.60630993586 50.041 2 -0.3755972605478648 0.09858221578919833 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 55935 18916 LDHFVSTI True PC9_epitope_Rep4 930.4810822189 930.47998993586 80.847 2 -0.3756716811676269 0.09861193457259443 0.9438714419765777 ['HGF|p.D592H|1|0.26|ENSG00000019991|chr7:81705737-81705737|C/G|missense_variant'] 24175 16269 EYTMLAPLDP True H1975_Epitope_Rep2 1148.5423621461198 1148.54126993586 67.791 2 -0.3756958021242235 0.09861193457259443 0.9438714419765777 ['ENSG00000138615|ENST00000261883|CILP'] 58182 12377 LESLKRYRFGK True NCI_RA007_Epitope_Rep2 1395.7986683715096 1395.79756993586 52.748 2 -0.3757543692680038 0.09861193457259443 0.9438714419765777 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 55550 8747 LAYYDAHP True NCI_RA007_Epitope_Rep2 948.43413202648 948.43302993586 38.671 2 -0.37583539890235823 0.09864165024673491 0.9438714419765777 ['NAP1L2|p.P317A|1|0.04|ENSG00000186462|chrX:73213544-73213544|G/C|missense_variant'] 107622 7782 TAGVFNVTL True H1975_Epitope_Rep3 920.4967322830399 920.49562993586 34.919 2 -0.37584101778008205 0.09864165024673491 0.9438714419765777 ['nc|ENSG00000184459|Q8NFQ6-2|BPIFC', 'ENSG00000184459|ENST00000300399|BPIFC'] 138207 16055 YQSDYDKTYP True PC9_epitope_Rep3 1278.54044756982 1278.5393499358602 66.907 2 -0.3758787308977179 0.09864165024673491 0.9438714419765777 ['ENSG00000175664|ENST00000380473|TEX26'] 56968 7538 LEEAAHDSSP True H1975_Epitope_Rep3 1054.45671794586 1054.45562993586 33.977 2 -0.37591926043447765 0.0986922406277245 0.9438714419765777 ['ENST00000372067.7_1_6:43753251-43753332:+|nuORF'] 123562 13754 VIIITTDTSP True PC9_epitope_Rep2 1058.5859412102602 1058.5848499358601 58.191 2 -0.376037812699131 0.09882828846422095 0.9438714419765777 ['ANKRD34A|p.W250Mfs*14|1|0.13|ENSG00000272031|chr1:145961012-145961013|-/T|frameshift_variant', 'ENSG00000272031|ENST00000606888|ANKRD34A'] 55033 6468 LALDREPPP True H1975_Epitope_Rep3 1006.5447451046199 1006.54364993586 29.851 2 -0.37604248463235324 0.09882828846422095 0.9438714419765777 ['nc|ENSG00000166359|Q6ZMY6-2|WDR88', 'ENSG00000166359|ENST00000355868|WDR88'] 134276 24927 WRRWHRRVNTT True H1975_Epitope_Rep2 1566.8392448272198 1566.8381499358602 102.46 2 -0.3760953071944573 0.09889630882429865 0.9438714419765777 ['ENSG00000174444|ENST00000307961|RPL4', 'ENST00000566622.5_1_15:66794044-66797161:-|nuORF', 'ENST00000566039.5_1_15:66793707-66797161:-|nuORF', 'ENST00000422486.1_1_3:185135660-185136437:-|nuORF', 'ENST00000566624.5_1_15:66794944-66797161:-|nuORF', 'ENST00000564439.5_1_15:66793756-66797161:-|nuORF'] 3354 9407 AGHSDVVL True PC9_epitope_Rep3 796.4079172786401 796.40682993586 41.121 2 -0.37614719955222803 0.09891202008578304 0.9438714419765777 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 27759 24915 FQEDRYWRFNE True H1975_Epitope_Rep2 1588.7058901854796 1588.7047899358602 102.41 2 -0.3761643525679022 0.0989277307994072 0.9438714419765777 ['ENSG00000102996|ENST00000219271|MMP15'] 118964 18589 VEEWPLEAL True PC9_epitope_Rep3 1084.54407639828 1084.5429699358601 76.728 2 -0.3762925855234165 0.09903061580305461 0.9438714419765777 ['ENST00000314289.12_2_4:2515676-2516066:+|nuORF'] 92890 25323 RRNKRLRMR True PC9_epitope_Rep3 1284.7785591469599 1284.77797496793 102.82 1 -0.37633480831835675 0.09908119322837666 0.9438714419765777 ['ENST00000544803.5_1_2:176794774-176794831:-|nuORF'] 28530 10040 FSHKNWLVF True NCI_RA007_Epitope_Rep4 1176.60801406752 1176.60637490379 45.461 3 -0.37637067612603053 0.09912831241283124 0.9438714419765777 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 30412 18635 GAFPILTDLT True PC9_epitope_Rep5 1046.5648118428599 1046.56370993586 76.706 2 -0.37637866930900354 0.09912831241283124 0.9438714419765777 ['nc|ENSG00000163703|Q96HD1-2|CRELD1'] 23446 9556 EVWNENKERRE True H1975_Epitope_Rep1 1487.7117038419099 1487.71060993586 41.682 2 -0.3764246739047931 0.09912831241283124 0.9438714419765777 ['ENSG00000170613|ENST00000302938|GARIN3'] 1019 6833 AEAEQEKDQLR True H1975_Epitope_Rep1 1315.6368075661499 1315.6351649037902 31.327 3 -0.3765204228019551 0.09917888460800893 0.9438714419765777 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 32865 19411 GILCYYWL True PC9_epitope_Rep3 1029.49937513533 1029.4982699358602 79.89 2 -0.3765975893868467 0.09919458875213556 0.9438714419765777 ['nc|ENSG00000103534|Q6UXY8-4|TMC5', 'ENST00000567478.5_1_16:19467998-19503571:+|nuORF', 'nc|ENSG00000103534|Q6UXY8-3|TMC5', 'nc|ENSG00000103534|Q6UXY8-2|TMC5', 'ENSG00000103534|ENST00000542583|TMC5'] 117978 21720 VASDIQMQLL True PC9_epitope_Rep3 1116.58489566444 1116.58378993586 88.839 2 -0.3766565980501828 0.09922253599693198 0.9438714419765777 ['ENSG00000137225|ENST00000398776|CAPN11', 'CAPN11|p.W639*|1|0.36|ENSG00000137225|chr6:44181298-44181298|G/-|frameshift_variant'] 56769 7986 LEAREYRLDK True NCI_RA007_Epitope_Rep2 1291.68844921619 1291.68734993586 35.694 2 -0.3766803649005166 0.09922253599693198 0.9438714419765777 ['LILRB4|p.L113Wfs*4|1|0.29|ENSG00000186818|chr19:54664016-54664016|C/-|frameshift_variant', 'nc|ENSG00000186818|Q8NHJ6-2|LILRB4', 'nc|ENSG00000186818|Q8NHJ6|LILRB4', 'ENSG00000186818|ENST00000695418|LILRB4', 'nc|ENSG00000186818|Q8NHJ6-3|LILRB4'] 55791 12603 LDEIIFFAYVP True NCI_RA007_Epitope_Rep1 1325.69074063197 1325.6896499358602 53.005 2 -0.3766863073714371 0.09922253599693198 0.9438714419765777 ['ENSG00000133962|ENST00000256343|CATSPERB', 'nc|ENSG00000133962|Q9H7T0-2|CATSPERB'] 46215 7409 ITDNPGLQ True PC9_epitope_Rep4 856.42904664604 856.4279499358599 35.846 2 -0.3767300420833931 0.09922253599693198 0.9438714419765777 ['ENSG00000150261|ENST00000279783|OR8K1'] 43497 18148 IIAILTPKKHT True NCI_RA007_Epitope_Rep1 1233.7808930490498 1233.7797899358602 74.735 2 -0.37677452094121777 0.09923823801140028 0.9438714419765777 ['ENSG00000119729|ENST00000238738|RHOQ', 'ENST00000557531.1_1_14:50067143-50067293:+|nuORF', 'ENST00000437982.1_1_2:130970445-130970847:-|nuORF', 'ENST00000489471.5_3_2:46787807-46808219:+|nuORF'] 78054 5498 PALPPQAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 26.157 2 -0.3768191088645305 0.0992452895961515 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 60507 20065 LINRPILVL True PC9_epitope_Rep4 1049.6961007959299 1049.69500993586 85.316 2 -0.376830586154648 0.0992452895961515 0.9438714419765777 ['ENSG00000186765|ENST00000417245|FSCN2', 'nc|ENSG00000186765|O14926-2|FSCN2'] 5691 12369 APAPPVYEA True PC9_epitope_Rep3 913.4545331178899 913.45342993586 52.607 2 -0.3768697351501107 0.0992452895961515 0.9438714419765777 ['ENSG00000169375|ENST00000394947|SIN3A', 'SIN3A|p.P268Hfs*19|1|0.34|ENSG00000169375|chr15:75411697-75411697|G/-|frameshift_variant', 'ENST00000568919.1_1_15:75722503-75722716:-|nuORF'] 112078 13170 TLTLISKTVQT True H1975_Epitope_Rep3 1203.7074533252699 1203.70634993586 55.909 2 -0.37689201567374936 0.0992452895961515 0.9438714419765777 ['nc|ENSG00000185989|Q14644-2|RASA3', 'ENSG00000185989|ENST00000334062|RASA3'] 53706 5003 KYDKAYQR True NCI_RA007_Epitope_Rep3 1070.55089311422 1070.5497899358602 26.675 2 -0.3769197571294762 0.0992452895961515 0.9438714419765777 ['ENST00000317243.9_1_19:2832388-2833811:+|nuORF'] 12895 4834 DLLTDEPFSRQ True H1975_Epitope_Rep3 1319.63574493699 1319.63410490379 23.719 3 -0.3769312110223916 0.0992452895961515 0.9438714419765777 ['ENSG00000100023|ENST00000398831|PPIL2', 'nc|ENSG00000100023|Q13356-2|PPIL2', 'ENST00000417788.5_1_22:22024636-22041216:+|nuORF'] 109474 6143 TGVPQEWQVK True H1975_Epitope_Rep1 1170.6033226099 1170.60166490379 28.699 3 -0.3771189611277648 0.09930808512121582 0.9438714419765777 ['ENST00000586602.5_1_19:9678795-9679729:-|nuORF'] 52534 4168 KPPPPPPPP True PC9_epitope_Rep6 922.5276384884999 922.52654993586 22.975 2 -0.37712854490904457 0.09930808512121582 0.9438714419765777 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 133888 7637 WMWWRRNRRGK True NCI_RA007_Epitope_Rep1 1630.8527867163796 1630.85113490379 33.699 3 -0.377139646968795 0.09930808512121582 0.9438714419765777 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3', 'ESYT3-RPN1|1|fusion'] 8535 7409 ATWRDERLRPL True NCI_RA007_Epitope_Rep5 1411.76843087239 1411.76677490379 35.176 3 -0.3771495771649651 0.09930808512121582 0.9438714419765777 ['ENST00000543145.6_1_15:74709933-74710227:-|nuORF'] 101149 17006 SLVNSFLGEF True PC9_epitope_Rep2 1111.5549754351498 1111.5538699358601 70.665 2 -0.37719106262161567 0.0993237826344592 0.9438714419765777 ['nc|ENSG00000103534|Q6UXY8-4|TMC5', 'ENST00000567478.5_1_16:19467998-19503571:+|nuORF', 'nc|ENSG00000103534|Q6UXY8-3|TMC5', 'nc|ENSG00000103534|Q6UXY8-2|TMC5', 'ENSG00000103534|ENST00000542583|TMC5'] 5535 6208 ANETENDIKV True PC9_epitope_Rep2 1131.54078192299 1131.53968993586 29.275 2 -0.37733078164386596 0.09941968875799453 0.9438714419765777 ['ENSG00000175820|ENST00000322527|CCDC168'] 34224 6339 GPKEPGFEA True PC9_epitope_Rep4 930.4446967101799 930.44358993586 31.458 2 -0.3773343126593808 0.09941968875799453 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 41913 17274 IEAFRSRLI True PC9_epitope_Rep1 1103.64512785223 1103.64402993586 71.262 2 -0.37738642766336583 0.09941968875799453 0.9438714419765777 ['nc|ENSG00000170085|Q8NDZ2-4|SIMC1', 'nc|ENSG00000170085|Q8NDZ2-3|SIMC1', 'nc|ENSG00000170085|Q8NDZ2|SIMC1', 'ENSG00000170085|ENST00000429602|SIMC1'] 57337 8145 LEGSREGSLP True NCI_RA007_Epitope_Rep5 1043.52473793603 1043.52364993586 38.013 2 -0.37742233093130584 0.09941968875799453 0.9438714419765777 ['ENSG00000144655|ENST00000273153|CSRNP1'] 110526 19909 TIQSVLLFP True PC9_epitope_Rep5 1016.5906326678798 1016.58952993586 81.634 2 -0.3774474785065762 0.09941968875799453 0.9438714419765777 ['nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 78788 20380 PELEMWSL True PC9_epitope_Rep5 1003.4684689298699 1003.46736993586 83.427 2 -0.3775553986017406 0.09945107606517382 0.9438714419765777 ['ENSG00000115687|ENST00000234040|PASK', 'nc|ENSG00000115687|Q96RG2-2|PASK', 'ENST00000472072.5_1_2:242045983-242047931:-|nuORF'] 101939 17358 SPLRPTLLI True PC9_epitope_Rep6 1008.6331661861999 1008.63206993586 79.383 2 -0.37758093630845324 0.09945107606517382 0.9438714419765777 ['ENST00000358888.7_1_12:56511327-56511564:+|nuORF'] 69357 16585 LVQAFQFTDK True PC9_epitope_Rep5 1195.62372370131 1195.62262993586 68.8 2 -0.3776087066422063 0.09948419475133308 0.9438714419765777 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 72447 20563 MTPKQILQV True PC9_epitope_Rep3 1056.6001518057599 1056.5990499358602 84.361 2 -0.37764969303492324 0.09949988673392929 0.9438714419765777 ['ENSG00000171456|ENST00000375687|ASXL1', 'ASXL1|p.G646Wfs*12|1|0.34|ENSG00000171456|chr20:32434638-32434639|-/G|frameshift_variant', 'ASXL1|p.T613Pfs*90|1|0.39|ENSG00000171456|chr20:32434547-32434547|G/-|frameshift_variant', 'nc|ENSG00000171456|Q8IXJ9-2|ASXL1', 'ENST00000470145.2_1_20:30954213-31016074:+|nuORF', 'ASXL1|p.V388Pfs*21|1|0.12|ENSG00000171456|chr20:32433355-32433356|TG/-|frameshift_variant'] 81594 19257 PRLQDLLL True PC9_epitope_Rep5 966.5862159937799 966.58510993586 79.113 2 -0.37773827813787253 0.09958180867746995 0.9438714419765777 ['RABGGTA|p.E512D|1|0.1|ENSG00000100949|chr14:24266449-24266449|C/A|missense_variant'] 101982 12111 SPNGQFVAP True PC9_epitope_Rep2 915.4450310633499 915.4444849679301 51.894 1 -0.37778207559006927 0.09958180867746995 0.9438714419765777 ['ENSG00000121741|ENST00000610343|ZMYM2'] 54167 9751 KYNRYRYI True PC9_epitope_Rep4 1174.6247267608198 1174.62307490379 45.145 3 -0.3778017618916881 0.09958180867746995 0.9438714419765777 ['nc|ENSG00000119121|Q9BX84-4|TRPM6', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6'] 81643 15741 PRRWWRWCWQP True NCI_RA007_Epitope_Rep4 1655.8044395416298 1655.80334993586 68.362 2 -0.3778445187510978 0.099614922200345 0.9438714419765777 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 41211 14741 IADLEEGEPAE True H1975_Epitope_Rep2 1171.52446315251 1171.52336993586 61.862 2 -0.37789515628203746 0.0996271387253023 0.9438714419765777 ['nc|ENSG00000141298|Q76I76|SSH2', 'SSH2|p.R1414Tfs*8|1|0.1|ENSG00000141298|chr17:29630873-29630874|-/T|frameshift_variant', 'ENSG00000141298|ENST00000540801|SSH2'] 73423 14113 NESICDEFAP True H1975_Epitope_Rep2 1123.44919003727 1123.44808993586 59.44 2 -0.37790593981346027 0.0996271387253023 0.9438714419765777 ['ARID5B|p.P1134Lfs*14|1|0.31|ENSG00000150347|chr10:62092863-62092872|CCGACAAATT/-|frameshift_variant', 'ENSG00000150347|ENST00000279873|ARID5B', 'nc|ENSG00000150347|Q14865-3|ARID5B'] 79578 4892 PGTPRMTWPQ True H1975_Epitope_Rep1 1169.5651632793702 1169.56351490379 23.893 3 -0.3779427367239438 0.0996271387253023 0.9438714419765777 ['ENST00000533603.5_1_11:75283563-75283611:+|nuORF'] 30832 5037 GAPVFSRAVER True PC9_epitope_Rep5 1187.6411051009497 1187.63944490379 24.405 3 -0.3780114826018219 0.099642826030142 0.9438714419765777 ['ENST00000502781.5_1_4:147096963-147097065:+|nuORF'] 126749 10683 VPSEQRQMLR True PC9_epitope_Rep5 1242.65028988566 1242.64864490379 46.083 3 -0.3781118880137682 0.09965851278834761 0.9438714419765777 ['nc|ENSG00000103168|Q15572-2|TAF1C', 'ENSG00000103168|ENST00000566732|TAF1C', 'nc|ENSG00000103168|Q15572|TAF1C', 'ENST00000566903.5_1_16:84212549-84216700:-|nuORF', 'ENST00000564774.5_1_16:84212549-84214094:-|nuORF', 'nc|ENSG00000103168|Q15572-5|TAF1C', 'ENST00000564208.5_1_16:84212549-84215086:-|nuORF', 'nc|ENSG00000103168|Q15572-4|TAF1C'] 135751 7992 YELLYCFRKD True NCI_RA007_Epitope_Rep1 1348.6485585501598 1348.64746993586 35.079 2 -0.3782053977110707 0.09971951708158394 0.9438714419765777 ['GH2|p.G187E|1|0.38|ENSG00000136487|chr17:63880415-63880415|C/T|missense_variant'] 65756 14471 LSIERLQKL True PC9_epitope_Rep2 1098.67609362734 1098.6749899358601 60.933 2 -0.3782467851503154 0.09971951708158394 0.9438714419765777 ['nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 99314 19903 SLDLLCQIKRN True PC9_epitope_Rep6 1301.7125557890497 1301.7114499358602 89.212 2 -0.3783429716859193 0.09971951708158394 0.9438714419765777 ['ENST00000392066.7_1_2:223797982-223799297:+|nuORF'] 37132 23388 GVTEAIENLV True H1975_Epitope_Rep1 1043.54989005471 1043.5487899358602 97.205 2 -0.37834614957673995 0.09971951708158394 0.9438714419765777 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant'] 52152 16402 KLVILEGELER True PC9_epitope_Rep3 1297.7605515272899 1297.7589149037901 68.229 3 -0.37838155224519054 0.09971951708158394 0.9438714419765777 ['nc|ENSG00000198467|P07951-3|TPM2', 'nc|ENSG00000198467|P07951-2|TPM2', 'ENSG00000198467|ENST00000645482|TPM2', 'CON__Q3SX28', 'TPM2-TMEM176B|1|fusion', 'ENST00000471212.5_1_9:35684790-35689844:-|nuORF', 'ENST00000604975.1_1_9:35685264-35689844:-|nuORF', 'ENSG00000167460|ENST00000643579|TPM4', 'ENST00000587201.5_1_19:16187360-16198908:+|nuORF', 'ENST00000520239.1_1_8:70041855-70042335:+|nuORF', 'nc|ENSG00000167460|P67936-2|TPM4'] 75240 6212 NPKEFYHEV True PC9_epitope_Rep6 1161.54547338061 1161.54382490379 32.357 3 -0.3784623934196547 0.09974740876230294 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 133386 13280 WFPRMRAMSL True PC9_epitope_Rep5 1293.6474534346899 1293.6457949037901 56.091 3 -0.37848302516544996 0.09974740876230294 0.9438714419765777 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENST00000493491.5_1_3:4841632-4887906:+|nuORF', 'ENSG00000123104|ENST00000381340|ITPR2', 'ENSG00000096433|ENST00000605930|ITPR3'] 54880 4197 LAGKLNTLAA True NCI_RA007_Epitope_Rep4 970.58113061334 970.58002993586 22.452 2 -0.37849456243669516 0.09974740876230294 0.9438714419765777 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9', 'SLC12A9|p.G497Rfs*4|1|0.28|ENSG00000146828|chr7:100861535-100861536|-/A|frameshift_variant', 'ENST00000487651.5_1_7:100458687-100458885:+|nuORF'] 101321 17106 SLYNDYVDV True PC9_epitope_Rep4 1086.48695544498 1086.4858499358602 73.802 2 -0.3784950979610817 0.09974740876230294 0.9438714419765777 ['ENST00000513085.1_1_5:95728707-95748688:-|nuORF', 'nc|ENSG00000175426|P29120-2|PCSK1', 'ENSG00000175426|ENST00000311106|PCSK1'] 97560 7149 SGVPEALDSDG True NCI_RA007_Epitope_Rep5 1045.45638359269 1045.45528993586 34.174 2 -0.3785503210906583 0.0997630909661011 0.9438714419765777 ['ENSG00000198746|ENST00000361720|GPATCH3'] 33292 14249 GLATDVQTV True PC9_epitope_Rep3 902.47091145802 902.4703649679301 59.895 1 -0.3785995532274338 0.09979271542789458 0.9438714419765777 ['ENSG00000277791|ENST00000619426|PSMB3'] 82255 11360 PTLLSMSPV True PC9_epitope_Rep3 943.50485443859 943.50374993586 48.701 2 -0.3786004864787101 0.09979271542789458 0.9438714419765777 ['ENST00000609401.5_1_X:62647883-62647997:-|nuORF'] 131636 11200 VWDWWHRRRRR True NCI_RA007_Epitope_Rep2 1707.90832744655 1707.9072299358602 48.149 2 -0.3786239703571288 0.09979271542789458 0.9438714419765777 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 17842 11732 EIAKQNWL True PC9_epitope_Rep1 1000.5341804209199 1000.53308993586 50.002 2 -0.3787715877919109 0.09985543343841986 0.9438714419765777 ['ENSG00000154451|ENST00000370459|GBP5', 'ENST00000481145.1_1_1:89726389-89728307:-|nuORF'] 48251 2606 KDFRRECRDER True NCI_RA007_Epitope_Rep5 1508.7266427133998 1508.72500490379 14.732 3 -0.3787998838278914 0.09985543343841986 0.9438714419765777 ['ENSG00000172409|ENST00000533682|CLP1', 'nc|ENSG00000172409|Q92989-2|CLP1'] 3008 8496 AFQGPREAD True PC9_epitope_Rep1 989.4566583762098 989.45556993586 37.515 2 -0.37882561363291234 0.09985543343841986 0.9438714419765777 ['ENSG00000206530|ENST00000393845|CFAP44'] 82442 19337 PVDDSWLQV True PC9_epitope_Rep2 1057.5080252427301 1057.5069299358602 79.753 2 -0.378843578474265 0.09985543343841986 0.9438714419765777 ['nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:131010813-131013220:+|nuORF'] 43465 5675 IHTDAFSKR True NCI_RA007_Epitope_Rep3 1073.56179215109 1073.5606899358602 29.305 2 -0.37895614746888506 0.0999007262657401 0.9438714419765777 ['ENSG00000186230|ENST00000334181|ZNF749'] 71926 13973 MPSAPVNTT True PC9_epitope_Rep6 916.4324177743201 916.43132993586 65.606 2 -0.3789749759681623 0.0999007262657401 0.9438714419765777 ['NBN|p.L708*|1|0.21|ENSG00000104320|chr8:89943316-89943316|A/-|frameshift_variant', 'ENSG00000104320|ENST00000265433|NBN'] 89511 5697 REQWRREQER True PC9_epitope_Rep1 1471.7392560024298 1471.73761490379 26.734 3 -0.3790097583108016 0.0999007262657401 0.9438714419765777 ['WWC3|p.Q980Rfs*4|1|0.3|ENSG00000047644|chrX:10138788-10138788|G/-|frameshift_variant', 'WWC3|p.Q1028Rfs*19|1|0.56|ENSG00000047644|chrX:10138932-10138932|G/-|frameshift_variant', 'ENSG00000047644|ENST00000380861|WWC3', 'nc|ENSG00000047644|Q9ULE0-2|WWC3'] 115927 19346 TVPLLQEV True PC9_epitope_Rep1 897.5171333744499 897.51602993586 79.219 2 -0.3790850993325413 0.0999007262657401 0.9438714419765777 ['ENST00000549478.1_1_12:104350783-104350876:-|nuORF'] 97365 22387 SGALYIPGWI True PC9_epitope_Rep3 1075.57023157647 1075.56912993586 91.389 2 -0.3791286087638171 0.09991640252185725 0.9438714419765777 ['ENSG00000016490|ENST00000394711|CLCA1'] 69131 12550 LVLKKQQA True PC9_epitope_Rep1 926.59130137422 926.59020993586 53.143 2 -0.379222506143687 0.09994949406990718 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21'] 60435 11834 LILCFQRM True PC9_epitope_Rep4 1022.54052875466 1022.5394299358601 53.291 2 -0.3792646410047337 0.09998258446534308 0.9438714419765777 ['ENST00000464491.5_1_2:172180771-172182690:-|nuORF'] 97217 13151 SFLCCAEA True H1975_Epitope_Rep1 842.3302612048999 842.32971496793 55.678 1 -0.379500893337664 0.10008359165476646 0.9438714419765777 ['L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|224|2|anti-sense'] 59771 11596 LGYTGSIVAA True PC9_epitope_Rep6 950.5072969667399 950.50618993586 55.72 2 -0.3795097417275091 0.10008359165476646 0.9438714419765777 ['nc|ENSG00000130021|Q08623-4|PUDP'] 33410 15839 GLFRQHRRKKE True PC9_epitope_Rep5 1453.8378478448897 1453.83619490379 65.915 3 -0.37961848864388253 0.1001079612732465 0.9438714419765777 ['ENST00000304494.9_2_9:21974788-21975004:-|nuORF'] 118695 14010 VECLEEVP True PC9_epitope_Rep2 916.42118438428 916.42008993586 59.166 2 -0.3796197566475928 0.1001079612732465 0.9438714419765777 ['ENST00000584483.5_1_17:61912248-61912488:-|nuORF'] 105425 19203 SVAIEASVKL True PC9_epitope_Rep1 1015.59136094387 1015.59026993586 78.659 2 -0.37963270291604534 0.1001079612732465 0.9438714419765777 ['VIRMA|p.G377V|2|0.13|ENSG00000164944|chr8:94527114-94527114|C/A|missense_variant'] 44361 15291 IMVQEERRL True PC9_epitope_Rep5 1172.6335771923598 1172.63194490379 63.826 3 -0.37964089423912994 0.1001079612732465 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000497100.5_1_X:53227940-53240837:-|nuORF', 'ENST00000469599.6_1_Y:21877495-21878275:-|nuORF', 'ENST00000465402.1_1_X:53230656-53239709:-|nuORF', 'ENST00000492117.1_1_Y:21877982-21883284:-|nuORF', 'ENST00000481369.1_1_X:53230656-53231176:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 104652 6670 SSYRRVMSSP True H1975_Epitope_Rep3 1168.56589155536 1168.56478993586 30.61 2 -0.3796975572285932 0.1001079612732465 0.9438714419765777 ['nc|ENSG00000138376|Q99728-3|BARD1', 'nc|ENSG00000138376|Q99728-2|BARD1', 'ENSG00000138376|ENST00000260947|BARD1'] 123454 11051 VIERSDIVV True PC9_epitope_Rep1 1028.5866099165999 1028.58550993586 47.396 2 -0.37972122512503886 0.1001079612732465 0.9438714419765777 ['ENSG00000041802|ENST00000265245|LSG1'] 91731 6478 RPKGLGLGA True PC9_epitope_Rep5 867.5290354708299 867.52792993586 29.89 2 -0.3797461880944234 0.10012188751523594 0.9438714419765777 ['ENSG00000068394|ENST00000156109|GPKOW'] 106267 11445 SVQKLVVVI True PC9_epitope_Rep4 983.6379172134698 983.63682993586 51.791 2 -0.37974984203920453 0.10012188751523594 0.9438714419765777 ['ENSG00000164109|ENST00000296509|MAD2L1'] 78217 2654 PAPRVVAAA True PC9_epitope_Rep2 850.5024863698198 850.50138993586 14.862 2 -0.3797878403120064 0.10013581278729627 0.9438714419765777 ['ENST00000215829.7_1_22:24951748-24951973:+|nuORF'] 55872 23489 LDFRFRYP True PC9_epitope_Rep1 1112.5767139392399 1112.57560993586 95.137 2 -0.37981087835731414 0.10013581278729627 0.9438714419765777 ['ENSG00000167619|ENST00000301204|TMEM145'] 100341 19389 SLMRRQKGSL True PC9_epitope_Rep3 1174.6604606465398 1174.65880490379 79.804 3 -0.3798326468012938 0.10015148085595389 0.9438714419765777 ['MBL2|p.T164Pfs*35|1|0.14|ENSG00000165471|chr10:52768395-52768395|G/-|frameshift_variant'] 56537 7133 LDVEPNC[Carbamidomethyl]RREG True H1975_Epitope_Rep1 1343.62519761606 1343.6241099358601 32.461 2 -0.37990688775427034 0.10018455966848905 0.9438714419765777 ['ENST00000503671.2_1_4:110736986-110737082:+|nuORF'] 40434 16476 HSAEQILEF True PC9_epitope_Rep2 1072.5189242795998 1072.51837496793 68.616 1 -0.37997611725470404 0.10020022634282232 0.9438714419765777 ['ENSG00000077232|ENST00000264065|DNAJC10', 'nc|ENSG00000077232|Q8IXB1-2|DNAJC10', 'ENST00000418559.5_1_2:183617332-183641856:+|nuORF', 'ENST00000491074.5_1_2:183616895-183641856:+|nuORF'] 77666 5450 PAAAAAAAPD True PC9_epitope_Rep3 824.4028318981999 824.40172993586 26.04 2 -0.38004660861097006 0.10028553520440142 0.9438714419765777 ['ENST00000246006.4_1_20:23066758-23066941:-|nuORF'] 82876 9088 PVVPESTGP True H1975_Epitope_Rep1 881.44944773745 881.44834993586 39.861 2 -0.3801248915907366 0.10029421493358402 0.9438714419765777 ['nc|ENSG00000073146|Q9BXT6-2|MOV10L1', 'nc|ENSG00000073146|Q9BXT6-4|MOV10L1', 'ENSG00000073146|ENST00000262794|MOV10L1'] 37403 9586 GVYNGKTFNQV True PC9_epitope_Rep6 1225.60913626633 1225.60802993586 47.179 2 -0.3801604484758524 0.10029421493358402 0.9438714419765777 ['ENSG00000115268|ENST00000592588|RPS15', 'ENST00000522454.1_1_5:164028010-164028223:-|nuORF'] 1568 6273 AEFAEVSK True PC9_epitope_Rep1 879.43379767331 879.43270993586 28.942 2 -0.38016862433286525 0.10029421493358402 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 52781 16694 KQQQQLVL True PC9_epitope_Rep4 983.5763795860697 983.57528993586 72.188 2 -0.38020615133752156 0.10029421493358402 0.9438714419765777 ['ENST00000393077.2_1_10:114575138-114575192:+|nuORF'] 136922 4782 YKDLVPDNSK True PC9_epitope_Rep4 1177.5979028762897 1177.5962549037902 24.966 3 -0.3802422381526053 0.10029421493358402 0.9438714419765777 ['ENSG00000087302|ENST00000261700|RTRAF', 'ENST00000553707.1_1_14:52465195-52466583:+|nuORF'] 78061 4699 PALPPQAH True PC9_epitope_Rep6 829.44463714053 829.44354993586 25.458 2 -0.3803478351278911 0.10034469551895825 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 107831 7841 TARCCDLP True H1975_Epitope_Rep2 877.3786083796499 877.37750993586 35.11 2 -0.3803921723395194 0.10037776578521317 0.9438714419765777 ['nc|ENSG00000143369|Q16610-2|ECM1', 'ENSG00000143369|ENST00000369047|ECM1', 'nc|ENSG00000143369|Q16610-4|ECM1'] 63229 16178 LNYYRNLFRNF True PC9_epitope_Rep2 1518.7731818996597 1518.7715249037901 67.481 3 -0.3804194478758063 0.10039342664159877 0.9438714419765777 ['ENSG00000105131|ENST00000221730|EPHX3'] 14704 19199 DVQMLLRFG True PC9_epitope_Rep6 1077.5641006502099 1077.56300993586 86.502 2 -0.38053783621467685 0.1004613108190443 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 58750 5024 LFLLSSSAP True NCI_RA007_Epitope_Rep2 933.51713337445 933.51602993586 24.167 2 -0.38054851663810585 0.10047172274539157 0.9438714419765777 ['ENST00000392690.3_1_2:168725736-168725883:+|nuORF'] 134485 10752 WTSLSLGTW True NCI_RA007_Epitope_Rep1 1049.51819600361 1049.5170899358602 45.817 2 -0.38055449820156434 0.10047172274539157 0.9438714419765777 ['ENST00000397621.5_1_16:746860-755534:-|nuORF'] 79952 6517 PISKNQSDP True NCI_RA007_Epitope_Rep1 984.48762415132 984.48652993586 29.364 2 -0.38057430242975615 0.10047172274539157 0.9438714419765777 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'ENST00000485605.1_1_19:43015056-43023397:-|nuORF', 'ENST00000344391.9_1_19:43023094-43025421:-|nuORF', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF'] 93867 9368 RVFVVGVGMTK True NCI_RA007_Epitope_Rep2 1191.67979910879 1191.67870993586 41.048 2 -0.3805889773753411 0.10047172274539157 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 15079 8279 EAAVVAAAV True H1975_Epitope_Rep1 799.4439684341899 799.44286993586 36.779 2 -0.3807038851668064 0.10051344530502132 0.9438714419765777 ['ENSG00000154174|ENST00000284320|TOMM70'] 47948 6835 KAAQVTAG True NCI_RA007_Epitope_Rep5 744.4130026590799 744.4124549679301 32.975 1 -0.3807738129602865 0.10051344530502132 0.9438714419765777 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 118797 11010 VEEDQDPSCP True PC9_epitope_Rep1 1117.42336921225 1117.4222699358602 47.238 2 -0.3807921093675229 0.10051344530502132 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 39547 15057 HPGFRQRCR True PC9_epitope_Rep2 1155.5832133853498 1155.58156490379 63.175 3 -0.38080892828931706 0.10051344530502132 0.9438714419765777 ['CD276|p.D84Pfs*82|1|0.1|ENSG00000103855|chr15:73702420-73702442|GCCAGGACCAGGGCAGCGCCTAT/-|frameshift_variant'] 81216 18743 PPLPLPPPP True PC9_epitope_Rep3 923.5480395799099 923.54694993586 77.317 2 -0.3808736259587023 0.10051344530502132 0.9438714419765777 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'MAMLD1|p.P359L|1|0.23|ENSG00000013619|chrX:150470649-150470649|C/T|missense_variant', 'ENSG00000188493|ENST00000378313|ACTMAP'] 86077 11432 QPNSGLLQA True PC9_epitope_Rep4 926.4821448480599 926.48104993586 51.741 2 -0.38089404931298976 0.10051344530502132 0.9438714419765777 ['ENST00000491976.1_1_1:31888748-31907043:+|nuORF', 'ENSG00000168528|ENST00000373709|SERINC2', 'nc|ENSG00000168528|Q96SA4-3|SERINC2', 'nc|ENSG00000168528|Q96SA4-2|SERINC2', 'nc|ENSG00000168528|Q96SA4-4|SERINC2'] 13664 11626 DQARTLPEL True PC9_epitope_Rep1 1041.54547338061 1041.54436993586 49.597 2 -0.3810215122928097 0.10052910052910052 0.9438714419765777 ['nc|ENSG00000186994|Q6NY19-1|KANK3', 'ENSG00000186994|ENST00000330915|KANK3'] 76911 11079 NVLLDNDRL True PC9_epitope_Rep6 1070.57202248162 1070.57092993586 53.535 2 -0.3810565819363402 0.10054475520824269 0.9438714419765777 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'ENST00000529422.1_1_19:10461953-10463789:-|nuORF', 'ENST00000530220.1_1_19:10461631-10463789:-|nuORF'] 43190 15287 IGTASGWGL True PC9_epitope_Rep5 860.43921740692 860.43812993586 63.811 2 -0.38114504371069235 0.10059521737617041 0.9438714419765777 ['ENSG00000009724|ENST00000400897|MASP2'] 77933 21217 PAISELIQSV True PC9_epitope_Rep5 1055.58627556343 1055.5851699358602 86.659 2 -0.3812032499720254 0.1006265227984685 0.9438714419765777 ['nc|ENSG00000147642|Q9NX95-5|SYBU', 'nc|ENSG00000147642|Q9NX95-2|SYBU', 'nc|ENSG00000147642|Q9NX95-4|SYBU', 'nc|ENSG00000147642|Q9NX95-3|SYBU', 'ENSG00000147642|ENST00000276646|SYBU'] 124064 22901 VKRKRTKGKK True PC9_epitope_Rep3 1227.82515790287 1227.82406993586 93.356 2 -0.3812246166179733 0.1006265227984685 0.9438714419765777 ['nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 128427 7584 VSEGATLLVA True NCI_RA007_Epitope_Rep3 958.5335117145798 958.53240993586 36.963 2 -0.3813614053160573 0.10065957780059519 0.9438714419765777 ['ENSG00000014824|ENST00000264451|SLC30A9', 'ENST00000509683.5_1_4:42065060-42077708:+|nuORF'] 101156 11307 SLVQDTKL True PC9_epitope_Rep2 902.50729696674 902.50618993586 48.815 2 -0.3813711919618303 0.10066822120906276 0.9438714419765777 ['ENSG00000171451|ENST00000310045|DSEL'] 37916 11905 HEDVNVGSI True PC9_epitope_Rep1 968.45632402304 968.45522993586 50.658 2 -0.3814031448512453 0.10066822120906276 0.9438714419765777 ['ENSG00000133302|ENST00000265140|SLF1'] 83473 4335 QDFLEWRRR True NCI_RA007_Epitope_Rep5 1304.6738022115599 1304.67214490379 23.279 3 -0.3814386842306841 0.10066822120906276 0.9438714419765777 ['SEC22C|p.H26L|1|0.65|ENSG00000093183|chr3:42568970-42568970|T/A|missense_variant', 'ENST00000456222.1_1_3:42605456-42610538:-|nuORF', 'nc|ENSG00000093183|Q9BRL7-3|SEC22C', 'nc|ENSG00000093183|Q9BRL7-2|SEC22C', 'ENSG00000093183|ENST00000264454|SEC22C'] 103753 12100 SRFHEQFIV True PC9_epitope_Rep4 1161.59309227937 1161.59143490379 54.347 3 -0.38149333845708994 0.10066822120906276 0.9438714419765777 ['nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1'] 139477 17778 YTGEGQWEV True PC9_epitope_Rep5 1067.45598966987 1067.4554749679298 73.402 1 -0.3814975628549158 0.10066822120906276 0.9438714419765777 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 11449 7838 DFTELSEDLGR True H1975_Epitope_Rep3 1280.5884603913998 1280.5873699358601 35.125 2 -0.38171174611131914 0.10073607461673656 0.9438714419765777 ['ENST00000361028.5_1_6:28350042-28350177:-|nuORF'] 42941 6909 IGACEFMK True H1975_Epitope_Rep3 897.40884587877 897.40774993586 31.535 2 -0.3817491929686709 0.10076737023438724 0.9438714419765777 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A', 'nc|ENSG00000079335|Q9UNH5-4|CDC14A'] 45874 5241 ISQRLRFII True NCI_RA007_Epitope_Rep4 1144.7080624619598 1144.7064149037901 26.698 3 -0.38175120049851496 0.10076737023438724 0.9438714419765777 ['OR5D13|p.C201R|1|0.43|ENSG00000279761|chr11:55774038-55774038|T/C|missense_variant'] 29861 18339 FVWSGTAEA True PC9_epitope_Rep2 966.4446967101799 966.44358993586 75.871 2 -0.38179700889514906 0.10077775651175334 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 77588 9830 NYTARFSRF True PC9_epitope_Rep4 1160.57269118796 1160.5710449037902 45.459 3 -0.38185144574427743 0.10077775651175334 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 99102 11211 SLAELHDELEK True NCI_RA007_Epitope_Rep1 1282.6404959642598 1282.6393899358602 47.607 2 -0.3818514943842039 0.10077775651175334 0.9438714419765777 ['nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2'] 73188 5892 NEEMLCRDP True H1975_Epitope_Rep2 1105.45322987189 1105.45212993586 27.649 2 -0.38189531269253096 0.10077775651175334 0.9438714419765777 ['ENSG00000133246|ENST00000423345|PRAM1', 'ENST00000599698.5_1_19:8555075-8555625:-|nuORF', 'ENST00000594696.1_1_19:8555075-8556051:-|nuORF'] 54078 11049 KYLYVDKNF True PC9_epitope_Rep4 1188.6179100448796 1188.6168099358601 50.276 2 -0.3819692657588773 0.10079164854284471 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 6920 12076 AQLEKVRAEWE True PC9_epitope_Rep5 1357.6990138998897 1357.69735490379 51.445 3 -0.3820550784705115 0.10079164854284471 0.9438714419765777 ['nc|ENSG00000140368|O43586-2|PSTPIP1', 'ENSG00000140368|ENST00000558012|PSTPIP1', 'ENST00000559750.5_1_15:77317886-77323646:+|nuORF', 'ENST00000560377.5_1_15:77317886-77324926:+|nuORF'] 39653 12816 HPRVDRMVVP True PC9_epitope_Rep1 1204.64989596284 1204.6482449037899 54.171 3 -0.38206075574577303 0.10080553960714721 0.9438714419765777 ['ENST00000406520.7_1_22:19939075-19948724:+|nuORF'] 58806 20412 LFQEYWDT True PC9_epitope_Rep2 1100.48147614172 1100.48097496793 83.941 1 -0.38210862360787284 0.10080553960714721 0.9438714419765777 ['ENSG00000159459|ENST00000290650|UBR1'] 75284 14776 NPRRWWRWCWQ True PC9_epitope_Rep1 1672.7946031339197 1672.7935099358601 61.656 2 -0.3821609662558996 0.10082118375726365 0.9438714419765777 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 14888 17175 DYIQLKSL True PC9_epitope_Rep5 978.53859709502 978.53750993586 71.086 2 -0.3822380496324043 0.10083682736303694 0.9438714419765777 ['nc|ENSG00000172987|Q8WWQ2-4|HPSE2', 'nc|ENSG00000172987|Q8WWQ2-3|HPSE2', 'nc|ENSG00000172987|Q8WWQ2-2|HPSE2', 'ENSG00000172987|ENST00000370552|HPSE2'] 22784 12203 EVDEYRRHWWR True NCI_RA007_Epitope_Rep1 1630.7753071579798 1630.7742099358602 51.435 2 -0.382405235393248 0.10084720700033054 0.9438714419765777 ['nc|ENSG00000010072|Q9H040-3|SPRTN', 'nc|ENSG00000010072|Q9H040-2|SPRTN', 'ENSG00000010072|ENST00000295050|SPRTN'] 22012 11395 ESPQSLLGGPP True H1975_Epitope_Rep2 1080.5451390274397 1080.5440499358601 48.88 2 -0.3825244087205373 0.10084720700033054 0.9438714419765777 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'SALL3|p.F649Lfs*5|1|0.44|ENSG00000256463|chr18:78993938-78993938|C/-|frameshift_variant', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3'] 105680 21319 SVGIVIVSLL True PC9_epitope_Rep2 998.6375828603 998.63648993586 87.468 2 -0.3825466566909924 0.10084720700033054 0.9438714419765777 ['ENST00000396953.6_2_3:12882746-12883025:-|nuORF'] 9181 18146 AVPDGPLQEV True PC9_epitope_Rep1 1023.52367530687 1023.5225699358599 74.589 2 -0.38254740519043134 0.10084720700033054 0.9438714419765777 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.Q1049Lfs*8|1|0.14|ENSG00000120800|chr12:101327183-101327186|CCAA/-|frameshift_variant'] 126254 6898 VPHCIINGYK True H1975_Epitope_Rep1 1142.5906497512199 1142.58954993586 31.573 2 -0.38258641026671447 0.10085933966530981 0.9438714419765777 ['RPLP0|p.S240C|1|0.1|ENSG00000089157|chr12:120197395-120197395|G/C|missense_variant'] 4395 18923 AISAGFQAL True PC9_epitope_Rep3 876.4705175352 876.46942993586 78.008 2 -0.3826142554688706 0.10085933966530981 0.9438714419765777 ['TMEM273|p.L52Q|1|0.21|ENSG00000204161|chr10:49166952-49166952|A/T|missense_variant'] 34393 7497 GPTPDHPQGP True PC9_epitope_Rep3 1001.45665837621 1001.45556993586 33.84 2 -0.3826250218436991 0.10085933966530981 0.9438714419765777 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 78408 12674 PAWFRCLK True PC9_epitope_Rep2 1019.5374919795498 1019.53638993586 54.059 2 -0.38268194776849823 0.10089062065126635 0.9438714419765777 ['ENSG00000135763|ENST00000258243|URB2', 'URB2|p.I416L|1|0.25|ENSG00000135763|chr1:229635859-229635859|A/T|missense_variant'] 56469 10667 LDTDQLLEA True H1975_Epitope_Rep1 1016.5026055091199 1016.50150993586 45.989 2 -0.38269169604299896 0.10089062065126635 0.9438714419765777 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 96978 7379 SEVHISNISA True H1975_Epitope_Rep2 1055.52473793603 1055.52364993586 33.323 2 -0.38271698034094787 0.10090450513132719 0.9438714419765777 ['ENST00000316963.7_1_8:54975912-55013486:-|nuORF'] 139769 19580 YVAVQHFSL True PC9_epitope_Rep1 1062.54983048506 1062.5487299358601 80.142 2 -0.38272988534400854 0.10090450513132719 0.9438714419765777 ['nc|ENSG00000125912|Q969V3-2|NCLN', 'ENSG00000125912|ENST00000246117|NCLN'] 24500 22768 FAIRGMLKTF True PC9_epitope_Rep3 1182.65833538822 1182.65668490379 92.846 3 -0.38280801741726683 0.10093753804943383 0.9438714419765777 ['HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4', 'ENST00000550968.5_1_12:112641421-112665930:-|nuORF'] 102192 14940 SPSIHLTDTL True PC9_epitope_Rep3 1082.56078909158 1082.5596899358602 62.599 2 -0.3828582638719368 0.10095317609406526 0.9438714419765777 ['ENST00000474550.5_1_2:101601378-101601966:+|nuORF'] 15181 8575 EAFDFDEYQP True PC9_epitope_Rep3 1259.4982484046698 1259.49714993586 37.935 2 -0.3828816795042755 0.10098620701650636 0.9438714419765777 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 8301 7828 ATLKDNEY True H1975_Epitope_Rep2 952.4501760134399 952.44906993586 35.059 2 -0.3829444520248577 0.1010174797808505 0.9438714419765777 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 984 8149 AEADENDMFNY True H1975_Epitope_Rep3 1317.48194671753 1317.48084993586 36.323 2 -0.38296081819445665 0.1010174797808505 0.9438714419765777 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3'] 27420 14083 FNGLFSRLRD True PC9_epitope_Rep5 1223.64110510095 1223.64000993586 59.185 2 -0.383037341063093 0.1010487503695845 0.9438714419765777 ['ENST00000471717.1_1_7:99772169-99774834:-|nuORF', 'ENSG00000213420|ENST00000292377|GPC2'] 9459 5920 AVWDENKKRP True NCI_RA007_Epitope_Rep2 1241.65166978465 1241.6500349037901 27.643 3 -0.3830473228391941 0.1010487503695845 0.9438714419765777 ['ENSG00000171467|ENST00000361428|ZNF318'] 65897 11693 LSLEETGAI True H1975_Epitope_Rep3 931.4862271689899 931.4856749679301 50.117 1 -0.38312364079201605 0.10108177675745243 0.9438714419765777 ['IFI44L|p.P437S|1|0.67|ENSG00000137959|chr1:78641594-78641594|C/T|missense_variant'] 77827 19688 PAFYPYGQY True NCI_RA007_Epitope_Rep5 1104.4916469026 1104.4905499358601 82.642 2 -0.38315593645959484 0.10111304347826088 0.9438714419765777 ['ENSG00000177508|ENST00000329734|IRX3', 'ENST00000558180.2_1_16:54318400-54319510:-|nuORF', 'IRX3|p.P113L|1|0.33|ENSG00000177508|chr16:54285543-54285543|G/A|missense_variant'] 45522 5121 ISFENASFLDP True H1975_Epitope_Rep3 1238.58191845898 1238.58082993586 24.808 2 -0.3831606757939927 0.10111304347826088 0.9438714419765777 ['ADGRF5|p.W968Gfs*8|1|0.1|ENSG00000069122|chr6:46859002-46859002|C/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'ADGRF5|p.D355Tfs*11|1|0.2|ENSG00000069122|chr6:46878380-46878380|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 17148 9281 EGVVTKCKP True H1975_Epitope_Rep3 959.5110024481899 959.50990993586 40.693 2 -0.3832033591738141 0.10114430802406872 0.9438714419765777 ['nc|ENSG00000116106|P54764-2|EPHA4', 'ENSG00000116106|ENST00000281821|EPHA4'] 24256 13201 FAACRRAYFK True PC9_epitope_Rep1 1231.6284322422696 1231.6267949037901 55.641 3 -0.3832202039321467 0.10114430802406872 0.9438714419765777 ['ENSG00000112320|ENST00000317357|SOBP', 'ENST00000477448.1_1_6:107811820-107879187:+|nuORF'] 75482 21945 NQILHILFV True PC9_epitope_Rep1 1095.64406522307 1095.64296993586 89.229 2 -0.3833013995098879 0.10115993948141835 0.9438714419765777 ['ENSG00000126773|ENST00000406854|PCNX4'] 56373 10207 LDRRYNMEK True NCI_RA007_Epitope_Rep4 1223.6080907205098 1223.6064449037901 46.115 3 -0.3833458848938074 0.10118944110179807 0.9438714419765777 ['ENSG00000125633|ENST00000376300|CCDC93'] 77591 9371 NYTARFSRF True PC9_epitope_Rep6 1160.57269118796 1160.5710449037902 46.237 3 -0.3833923210567055 0.10118944110179807 0.9438714419765777 ['ENSG00000144231|ENST00000272645|POLR2D'] 119273 16309 VELGITISSP True PC9_epitope_Rep5 1014.55972646242 1014.55862993586 67.728 2 -0.3834276681640288 0.10118944110179807 0.9438714419765777 ['nc|ENSG00000155974|Q9Y3R0-3|GRIP1', 'nc|ENSG00000155974|Q9Y3R0-2|GRIP1', 'ENSG00000155974|ENST00000359742|GRIP1', 'GRIP1|p.E618Nfs*9|1|0.15|ENSG00000155974|chr12:66406415-66406415|C/-|frameshift_variant'] 3061 12449 AGAAVAFI True H1975_Epitope_Rep1 718.40137534622 718.40082496793 52.922 1 -0.3834576958656598 0.10120507068704679 0.9438714419765777 ['ENSG00000147100|ENST00000587091|SLC16A2'] 124391 13834 VLEEDLDI True PC9_epitope_Rep2 944.4702427516798 944.46914993586 58.496 2 -0.38347967525598176 0.10125547749878278 0.9438714419765777 ['ENST00000485714.1_1_1:46657733-46659087:-|nuORF', 'ENST00000396420.7_1_1:46654944-46659087:-|nuORF', 'ENSG00000085998|ENST00000371984|POMGNT1', 'nc|ENSG00000085998|Q8WZA1-2|POMGNT1'] 125521 17575 VLVSVGLLGL True PC9_epitope_Rep5 968.6270181765998 968.62592993586 72.611 2 -0.38350747635091686 0.10127110539219948 0.9438714419765777 ['ENST00000225964.9_1_17:48274384-48275320:-|nuORF'] 33767 11025 GLSPLQRHRL True H1975_Epitope_Rep3 1175.68872399971 1175.68762993586 47.497 2 -0.3835559640919144 0.10128497157065605 0.9438714419765777 ['ENST00000476344.1_1_1:149871204-149872023:+|nuORF', 'ENSG00000178096|ENST00000369152|BOLA1'] 111061 12097 TLDTNHVSI True PC9_epitope_Rep1 998.50327421546 998.50216993586 51.391 2 -0.38357817825449003 0.10128497157065605 0.9438714419765777 ['ZNF823|p.V107Afs*130|1|0.23|ENSG00000197933|chr19:11723214-11723214|A/-|frameshift_variant'] 110377 20423 TILPPLEKL True PC9_epitope_Rep3 1022.6375828603 1022.6364899358599 83.81 2 -0.3836475819549385 0.1013179858116567 0.9438714419765777 ['ENSG00000167701|ENST00000394955|GPT'] 11388 24217 DFIFPTQSLLF True PC9_epitope_Rep3 1326.6859896046997 1326.6848899358602 98.446 2 -0.38384012083731334 0.101368386277885 0.9438714419765777 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 7291 4246 ARPSPQVPA True PC9_epitope_Rep2 921.50321464581 921.50210993586 21.662 2 -0.383899410127153 0.1013822481091889 0.9438714419765777 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'ROBO4|p.I751Sfs*43|2|0.13|ENSG00000154133|chr11:124887162-124887162|G/-|frameshift_variant', 'ROBO4|p.L856Cfs*18|2|0.14|ENSG00000154133|chr11:124886692-124886693|AG/T|frameshift_variant', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000532216.5_1_11:124756354-124763822:-|nuORF', 'ENST00000534407.5_1_11:124757602-124761787:-|nuORF'] 86617 16901 QRDSLLWKL True PC9_epitope_Rep2 1157.6556925359298 1157.65405490379 70.254 3 -0.3839249442584898 0.1013822481091889 0.9438714419765777 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475843.5_1_2:220462835-220466521:+|nuORF'] 98841 6374 SITTVQIQK True NCI_RA007_Epitope_Rep4 1016.5866099166 1016.58550993586 31.121 2 -0.3839443657533605 0.10139787189651575 0.9438714419765777 ['ENST00000394091.5_1_3:101177876-101232004:-|nuORF'] 112660 8277 TPFMTHQEHSI True PC9_epitope_Rep1 1326.6026709869 1326.6010349037902 36.67 3 -0.3840756543530797 0.10143088130465776 0.9438714419765777 ['ENSG00000081019|ENST00000261441|RSBN1', 'nc|ENSG00000081019|Q5VWQ0-4|RSBN1'] 15336 9919 EALATLPSSP True H1975_Epitope_Rep3 984.51277627 984.51166993586 43.185 2 -0.384141669731289 0.10149160321268384 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF'] 100518 14226 SLPRDLTI True PC9_epitope_Rep2 913.5232813840499 913.52218993586 59.987 2 -0.38414500379753497 0.10149160321268384 0.9438714419765777 ['ENST00000369815.5_1_10:105152218-105155557:-|nuORF', 'ENST00000369825.5_1_10:105154056-105155557:-|nuORF'] 77822 7223 PAESIGLA True H1975_Epitope_Rep2 756.40176926904 756.40122496793 32.717 1 -0.38415473531185085 0.10149160321268384 0.9438714419765777 ['ENST00000577161.5_1_17:78811748-78857220:+|nuORF'] 121537 17929 VGKLWFVL True PC9_epitope_Rep4 960.5796740613598 960.57856993586 77.012 2 -0.38415667563107486 0.10149160321268384 0.9438714419765777 ['ENSG00000177291|ENST00000321660|GJD4'] 58909 12288 LFVGAEQLT True PC9_epitope_Rep4 976.5229470308799 976.52184993586 55.082 2 -0.38419427347620444 0.10149160321268384 0.9438714419765777 ['ENSG00000157445|ENST00000474759|CACNA2D3', 'nc|ENSG00000157445|Q8IZS8-2|CACNA2D3'] 58967 11542 LFYSSVIE True PC9_epitope_Rep2 956.4854988929999 956.48440993586 49.722 2 -0.384221023677393 0.10155054929773327 0.9438714419765777 ['OR9K2|p.T163Hfs*25|1|0.3|ENSG00000170605|chr12:55130253-55130253|C/-|frameshift_variant', 'ENSG00000170605|ENST00000641329|OR9K2', 'nc|ENSG00000170605|Q8NGE7|OR9K2'] 125907 8898 VNVDEVGG True PC9_epitope_Rep3 787.3711974167499 787.37064496793 39.178 1 -0.38422625996040943 0.10155054929773327 0.9438714419765777 ['ENSG00000244734|ENST00000335295|HBB', 'ENST00000485743.1_1_11:5247788-5248251:-|nuORF'] 60520 19015 LIPDIDLKL True PC9_epitope_Rep6 1038.63249747986 1038.6314099358601 85.785 2 -0.3842414822824338 0.10155054929773327 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 55756 5046 LDEAVDRE True NCI_RA007_Epitope_Rep4 945.44033960573 945.43924993586 25.904 2 -0.3842482420387826 0.10155054929773327 0.9438714419765777 ['ENSG00000071462|ENST00000265758|BUD23', 'nc|ENSG00000071462|O43709-3|BUD23', 'nc|ENSG00000071462|O43709-2|BUD23', 'ENST00000463307.5_1_7:73097949-73107126:+|nuORF'] 57902 16222 LEQKDVNSL True PC9_epitope_Rep2 1044.54513902744 1044.5440499358601 67.644 2 -0.38426463396639093 0.10155054929773327 0.9438714419765777 ['ENSG00000123545|ENST00000316149|NDUFAF4'] 81399 13176 PPVPLPAPS True PC9_epitope_Rep5 873.49600400705 873.49490993586 55.687 2 -0.3842889797437168 0.10155054929773327 0.9438714419765777 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 56498 19059 LDTNKQYEV True PC9_epitope_Rep2 1108.540053647 1108.53894993586 78.676 2 -0.3843103290988448 0.10156263579635327 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 7652 5999 ASLVGVGLPPP True NCI_RA007_Epitope_Rep3 1005.5858816406098 1005.58478993586 30.574 2 -0.38432690810556885 0.10156263579635327 0.9438714419765777 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000590400.1_1_19:11303345-11305238:-|nuORF'] 20927 9317 EQVKLMPPAP True H1975_Epitope_Rep1 1108.5950664253198 1108.59396993586 40.744 2 -0.38434537431382443 0.10156263579635327 0.9438714419765777 ['nc|ENSG00000041515|Q9Y6X6-4|MYO16', 'MYO16|p.T705Qfs*8|1|0.13|ENSG00000041515|chr13:108962446-108962446|A/-|frameshift_variant', 'MYO16|p.L752Ffs*14|1|0.13|ENSG00000041515|chr13:108964849-108964850|-/T|frameshift_variant', 'ENST00000375857.6_1_13:109445985-109707944:+|nuORF', 'nc|ENSG00000041515|Q9Y6X6-3|MYO16', 'nc|ENSG00000041515|Q9Y6X6-2|MYO16', 'MYO16|p.V1625Wfs*16|1|0.49|ENSG00000041515|chr13:109141146-109141146|C/-|frameshift_variant', 'MYO16|p.A1658Rfs*45|1|0.14|ENSG00000041515|chr13:109141243-109141244|-/C|frameshift_variant', 'nc|ENSG00000041515|Q9Y6X6|MYO16', 'ENSG00000041515|ENST00000457511|MYO16'] 112048 8643 TLTDNCCVLR True PC9_epitope_Rep3 1136.5318145457597 1136.53015490379 38.196 3 -0.3843606184225499 0.10157825210317736 0.9438714419765777 ['ENST00000412364.2_1_3:197024230-197024314:-|nuORF'] 44432 6008 INISEGNC[Carbamidomethyl]PER True NCI_RA007_Epitope_Rep2 1287.58774947818 1287.5866499358601 27.979 2 -0.38441835283408327 0.10160771704180065 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000498121.1_1_21:47289198-47321357:+|nuORF', 'ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 124613 25346 VLHRRRRANAF True PC9_epitope_Rep5 1394.8119674502198 1394.8108699358602 102.7 2 -0.3844335766152762 0.10160771704180065 0.9438714419765777 ['nc|ENSG00000057593|P08709|F7', 'ENSG00000057593|ENST00000346342|F7'] 16310 7594 EEISIWDIR True NCI_RA007_Epitope_Rep1 1159.5873381925899 1159.58624993586 33.531 2 -0.38444594797958287 0.10160771704180065 0.9438714419765777 ['ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENST00000472061.1_1_7:99754715-99755074:-|nuORF'] 17058 20098 EGPLGTVAVI True PC9_epitope_Rep3 954.5385970950199 954.5380449679301 82.558 1 -0.3844568041276444 0.10162156525366287 0.9438714419765777 ['ENSG00000174013|ENST00000311630|FBXO45'] 113492 10492 TQSEWENSF True H1975_Epitope_Rep2 1126.4567179458597 1126.45562993586 45.376 2 -0.38446007254114833 0.10162156525366287 0.9438714419765777 ['ANO4|p.E585Q|1|0.55|ENSG00000151572|chr12:101096550-101096550|G/C|missense_variant'] 34487 7065 GQDGSPRLRS True NCI_RA007_Epitope_Rep1 1071.54211933567 1071.54102993586 31.476 2 -0.3844868484934441 0.10163541250282417 0.9438714419765777 ['ENST00000432473.1_1_22:42764777-42764903:-|nuORF'] 87578 10930 QTPNIQLSI True PC9_epitope_Rep5 1012.5553097883198 1012.55420993586 47.032 2 -0.38448785632759663 0.10163541250282417 0.9438714419765777 ['DSG4|p.A342T|1|0.19|ENSG00000175065|chr18:31399290-31399290|G/A|missense_variant'] 22969 13023 EVIFTTVCIP True H1975_Epitope_Rep2 1120.58383303528 1120.58272993586 55.212 2 -0.38461443053602795 0.10166840458811262 0.9438714419765777 ['ENSG00000188324|ENST00000358433|OR6C6'] 79591 10729 PGVEELSSC True H1975_Epitope_Rep2 919.39569791243 919.39514496793 46.296 1 -0.3847192347999338 0.1016996280977373 0.9438714419765777 ['ENST00000487875.5_1_15:91490935-91491606:+|nuORF'] 20119 10219 ENLAGVRTN True NCI_RA007_Epitope_Rep1 972.49885754136 972.49776993586 43.76 2 -0.3847195671231093 0.1016996280977373 0.9438714419765777 ['nc|ENSG00000140859|Q9BVG8-4|KIFC3', 'nc|ENSG00000140859|Q9BVG8-5|KIFC3', 'ENSG00000140859|ENST00000445690|KIFC3', 'nc|ENSG00000140859|Q9BVG8|KIFC3', 'nc|ENSG00000140859|Q9BVG8-6|KIFC3'] 100700 6867 SLRECRMLSQR True NCI_RA007_Epitope_Rep5 1377.6969228082498 1377.69526490379 33.096 3 -0.38475462274487815 0.1017308494369526 0.9438714419765777 ['ENST00000605952.5_2_7:150710035-150710410:-|nuORF'] 4268 20449 AIIPYFITL True NCI_RA007_Epitope_Rep3 1049.61611913973 1049.61502993586 89.093 2 -0.3847554697093261 0.1017308494369526 0.9438714419765777 ['ENSG00000177272|ENST00000369769|KCNA3', 'ENSG00000111262|ENST00000382545|KCNA1', 'ENSG00000177301|ENST00000316361|KCNA2', 'nc|ENSG00000177301|P16389-2|KCNA2'] 56054 15789 LDLARGDFAQA True PC9_epitope_Rep3 1175.59348620219 1175.5923899358602 65.888 2 -0.3848614895756661 0.10176383699713268 0.9438714419765777 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 90027 14811 RGGGCGGGG True NCI_RA007_Epitope_Rep4 676.2711065359999 676.27055496793 64.432 1 -0.38491616870753564 0.10177590880656148 0.9438714419765777 ['ENST00000407595.2_1_2:56411641-56419673:+|nuORF'] 106602 10195 SWFWFRLYWFP True NCI_RA007_Epitope_Rep5 1633.7870410586497 1633.78540490379 45.847 3 -0.3849289964290176 0.10177590880656148 0.9438714419765777 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 71041 4067 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 20.77 2 -0.3849367721197942 0.10177590880656148 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 119487 11125 VEQGREQTL True PC9_epitope_Rep3 1058.5356369729 1058.53452993586 47.791 2 -0.3850468332739138 0.10180150443861508 0.9438714419765777 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000529299.2_1_1:110170417-110171118:+|nuORF'] 118482 9007 VDRSTGIGI True PC9_epitope_Rep3 916.4977949121999 916.49668993586 39.589 2 -0.38506060861064995 0.10180150443861508 0.9438714419765777 ['ENST00000571240.1_1_17:7946036-7951880:+|nuORF', 'nc|ENSG00000179593|O15296-3|ALOX15B', 'ENSG00000179593|ENST00000380183|ALOX15B'] 101047 7523 SLTLSAPS True NCI_RA007_Epitope_Rep3 774.41233395274 774.41122993586 36.714 2 -0.3850684607153911 0.10180150443861508 0.9438714419765777 ['ENSG00000159433|ENST00000290607|STARD9'] 4827 7843 ALERRNDELYY True H1975_Epitope_Rep2 1440.69974217588 1440.69808490379 35.117 3 -0.3850902361935067 0.10180150443861508 0.9438714419765777 ['ADCY6|p.R963L|1|0.28|ENSG00000174233|chr12:48771873-48771873|C/A|missense_variant'] 77225 11911 NYIEKVVAI True NCI_RA007_Epitope_Rep5 1047.59644632431 1047.5953499358602 52.473 2 -0.38510576708746186 0.10180150443861508 0.9438714419765777 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 109288 18036 TGDTIALNIIK True PC9_epitope_Rep2 1157.66558851329 1157.66448993586 74.681 2 -0.38511254328399935 0.10180150443861508 0.9438714419765777 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 15376 10642 EALNIQEGKT True H1975_Epitope_Rep1 1101.56660274801 1101.56550993586 45.891 2 -0.3851456743957145 0.10180150443861508 0.9438714419765777 ['nc|ENSG00000211780|A0A075B6T7|TRAV6'] 71051 5021 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 24.434 2 -0.38517037028615525 0.10180150443861508 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 29648 11730 FVLTGFLHQPD True H1975_Epitope_Rep3 1272.65027280232 1272.64916993586 50.26 2 -0.3851868428775948 0.10180150443861508 0.9438714419765777 ['ENSG00000230301|ENST00000615035|OR5H6', 'nc|ENSG00000230301|Q8NGV6|OR5H6'] 133065 16950 VYWGMLWFAF True PC9_epitope_Rep6 1318.6208872503396 1318.6197899358601 77.742 2 -0.3852129487239496 0.10180150443861508 0.9438714419765777 ['ENST00000418609.5_1_4:186508297-186508507:-|nuORF'] 119991 8189 VFAIGQVK True NCI_RA007_Epitope_Rep2 860.51198842436 860.51088993586 36.49 2 -0.38522735282882675 0.10180150443861508 0.9438714419765777 ['ENST00000536573.6_1_12:1213918-1353789:+|nuORF'] 29034 21305 FTLPEVAEC True PC9_epitope_Rep5 1007.4633835494299 1007.46287496793 87.003 1 -0.3852431033657557 0.10180150443861508 0.9438714419765777 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU', 'ENST00000468690.2_2_1:245019158-245019479:-|nuORF'] 90651 3780 RKKRKILARKK True PC9_epitope_Rep2 1423.9939545634695 1423.99284993586 19.804 2 -0.3852517154056672 0.10180150443861508 0.9438714419765777 ['nc|ENSG00000168297|Q7Z7A4-5|PXK', 'nc|ENSG00000168297|Q7Z7A4-7|PXK', 'nc|ENSG00000168297|Q7Z7A4-2|PXK', 'nc|ENSG00000168297|Q7Z7A4-6|PXK', 'nc|ENSG00000168297|Q7Z7A4-4|PXK', 'ENSG00000168297|ENST00000356151|PXK', 'nc|ENSG00000168297|Q7Z7A4-3|PXK'] 120879 9015 VGDVFRGG True PC9_epitope_Rep4 805.4082516318099 805.40714993586 42.246 2 -0.3852681009818297 0.10180150443861508 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 85602 19190 QLMINPFQL True PC9_epitope_Rep3 1102.58450174162 1102.5834099358601 79.032 2 -0.38536881235694614 0.10180150443861508 0.9438714419765777 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.Q2344Kfs*48|2|0.43|ENSG00000091656|chr8:76853949-76853949|C/-|frameshift_variant', 'ZFHX4|p.P2910Qfs*27|1|0.24|ENSG00000091656|chr8:76855647-76855647|C/-|frameshift_variant', 'ZFHX4|p.A2982Qfs*10|1|0.33|ENSG00000091656|chr8:76855863-76855863|G/-|frameshift_variant', 'ZFHX4|p.N1257Kfs*31|1|0.25|ENSG00000091656|chr8:76849634-76849635|-/A|frameshift_variant', 'ZFHX4|p.K1442Nfs*10|1|0.42|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant', 'ZFHX4|p.D852Y|1|0.57|ENSG00000091656|chr8:76706642-76706642|G/T|missense_variant', 'ZFHX4|p.D841N|1|0.77|ENSG00000091656|chr8:76706609-76706609|G/A|missense_variant', 'nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 96697 5731 SEPQDLASP True H1975_Epitope_Rep2 942.42944056886 942.42834993586 27.042 2 -0.3854504041449804 0.10181710791466889 0.9438714419765777 ['ENST00000374040.7_1_1:27693273-27693339:-|nuORF'] 126268 11240 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 48.243 2 -0.3854929239908685 0.10185008251541736 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 12800 7612 DLIQVADS True NCI_RA007_Epitope_Rep3 859.4287122928699 859.42816496793 37.071 1 -0.3855519876804419 0.1018656846054963 0.9438714419765777 ['GPER1|p.L108Q|1|0.11|ENSG00000164850|chr7:1092051-1092051|T/A|missense_variant'] 30424 18930 GAFYMFYF True PC9_epitope_Rep1 1044.44152590604 1044.44042993586 77.599 2 -0.3856095125140024 0.10193162868260144 0.9438714419765777 ['ENST00000556431.1_1_14:105225902-105225959:+|nuORF'] 68586 8089 LTYITSNDTAP True PC9_epitope_Rep3 1194.57683307854 1194.57517490379 36.089 3 -0.38562066987969773 0.10193162868260144 0.9438714419765777 ['ENST00000604542.1_1_3:72933577-72933772:+|nuORF'] 131020 18013 VVLGLMISSL True PC9_epitope_Rep4 1030.6096538603 1030.60854993586 77.346 2 -0.3856255809260364 0.10194722854313953 0.9438714419765777 ['ENST00000581045.1_2_17:71282696-71305904:-|nuORF'] 118028 14337 VATAVEQI True PC9_epitope_Rep5 829.4545331178899 829.45342993586 60.148 2 -0.38564004542023955 0.10196282786173354 0.9438714419765777 ['ENSG00000028839|ENST00000237264|TBPL1'] 71048 4729 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 23.315 2 -0.38569375846781184 0.101995796494763 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 111862 17918 TLRLDVEAL True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 74.226 2 -0.3857212453536142 0.10201139442784687 0.9438714419765777 ['GRM6|p.L707Cfs*6|1|0.47|ENSG00000113262|chr5:178986135-178986135|G/-|frameshift_variant', 'ENSG00000113262|ENST00000517717|GRM6'] 61917 19971 LLLLLLLL True PC9_epitope_Rep2 922.68307650074 922.68196993586 82.218 2 -0.38581263738053173 0.10209114908989857 0.9438714419765777 ['ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'UCN3|p.P18H|1|0.47|ENSG00000178473|chr10:5373773-5373773|C/A|missense_variant', 'PLBD1|p.N149Ifs*17|1|0.25|ENSG00000121316|chr12:14540881-14540881|C/-|frameshift_variant', 'ENSG00000183971|ENST00000566435|NPW', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000182685|ENST00000328540|BRICD5', 'ENSG00000117899|ENST00000261758|MESD', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENSG00000184709|ENST00000371542|LRRC26', 'FAT1|p.H507Rfs*6|1|0.13|ENSG00000083857|chr4:186708307-186708308|AT/-|frameshift_variant', 'ENSG00000121316|ENST00000240617|PLBD1', 'FAT1|p.N618Tfs*9|1|0.18|ENSG00000083857|chr4:186707975-186707975|T/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENSG00000178473|ENST00000380433|UCN3', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENSG00000070031|ENST00000176195|SCT', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'nc|ENSG00000117899|Q14696-2|MESD', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-4|SHBG', 'nc|ENSG00000129214|P04278-3|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000129214|P04278-5|SHBG', 'ENSG00000129214|ENST00000380450|SHBG', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000125810|ENST00000246006|CD93', 'ENSG00000109758|ENST00000382774|HGFAC', 'SHBG|p.L175Afs*39|1|0.14|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'CD93|p.E121Rfs*79|1|0.71|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'ENSG00000167680|ENST00000586582|SEMA6B', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ADGRB1|p.D708Tfs*49|1|0.15|ENSG00000181790|chr8:142481700-142481700|G/-|frameshift_variant', 'ATRN-TNKS2|2|fusion', 'ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant', 'ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000162337|ENST00000294304|LRP5', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 66827 10839 LSVRDFDPV True H1975_Epitope_Rep2 1046.53965972418 1046.53856993586 46.721 2 -0.3858284542164127 0.10209114908989857 0.9438714419765777 ['nc|ENSG00000254087|P07948-2|LYN', 'ENSG00000254087|ENST00000519728|LYN'] 75311 11770 NPVAGVLAA True PC9_epitope_Rep4 810.4599528514999 810.45884993586 53.04 2 -0.38583339034502784 0.10209114908989857 0.9438714419765777 ['ENST00000258739.8_1_7:6501985-6502291:-|nuORF'] 98687 5493 SIQRISSVEGR True NCI_RA007_Epitope_Rep1 1230.66804812478 1230.66640490379 25.438 3 -0.38584980251720097 0.10209114908989857 0.9438714419765777 ['OR13F1|p.L226Q|2|0.26|ENSG00000186881|chr9:104504939-104504939|T/A|missense_variant'] 34223 7502 GPKEPGFEA True PC9_epitope_Rep3 930.4446967101799 930.44358993586 33.859 2 -0.3859122587904513 0.10209433175882189 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18'] 128449 18365 VSEPRYFQL True PC9_epitope_Rep5 1137.5818588893299 1137.5807699358602 75.66 2 -0.38598317729634357 0.10209433175882189 0.9438714419765777 ['ENSG00000101158|ENST00000652272|NELFCD', 'nc|ENSG00000101158|Q8IXH7|NELFCD', 'ENST00000474543.5_1_20:57564608-57568882:+|nuORF', 'ENST00000478389.5_1_20:57566845-57568278:+|nuORF'] 34655 16208 GQKNQLVAL True PC9_epitope_Rep4 969.5607295219298 969.55962993586 70.288 2 -0.3859924357481093 0.10209433175882189 0.9438714419765777 ['TMEM106B|p.E75K|2|0.35|ENSG00000106460|chr7:12218463-12218463|G/A|missense_variant'] 112885 9652 TPPPGLASA True PC9_epitope_Rep6 809.42831837005 809.4272299358599 47.482 2 -0.3860080516977298 0.10209433175882189 0.9438714419765777 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 129515 17872 VTFLSDLR True PC9_epitope_Rep5 949.5232813840499 949.52218993586 73.763 2 -0.3860236452485273 0.10209433175882189 0.9438714419765777 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1'] 13028 15090 DLQRVPRNYDP True H1975_Epitope_Rep2 1371.68951184535 1371.6884099358601 63.196 2 -0.3860284611333334 0.10209433175882189 0.9438714419765777 ['ENSG00000164934|ENST00000612750|DCAF13', 'ENST00000561147.1_1_15:51236911-51236971:+|nuORF', 'nc|ENSG00000164934|Q9NV06-2|DCAF13', 'ENST00000521716.1_1_8:104427674-104432721:+|nuORF'] 80205 20166 PLAIFALL True H1975_Epitope_Rep1 856.5422259234799 856.54112993586 83.916 2 -0.38603069562563247 0.10209433175882189 0.9438714419765777 ['ENSG00000182327|ENST00000331264|GLTPD2'] 17285 9646 EHDGSLFQA True PC9_epitope_Rep6 1002.4406739589 1002.43956993586 47.457 2 -0.38606040076842146 0.10209433175882189 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 33603 8103 GLLISDLRPP True H1975_Epitope_Rep1 1079.63389446219 1079.63278993586 36.114 2 -0.38608607908885495 0.10210992445949466 0.9438714419765777 ['ENST00000326019.10_1_2:27886341-27886545:+|nuORF'] 92576 1901 RRCHMVERLC True H1975_Epitope_Rep1 1301.6267350734497 1301.6250749037902 9.8573 3 -0.3861522310201727 0.10212551661862258 0.9438714419765777 ['ENSG00000105708|ENST00000344099|ZNF14'] 134715 8675 WWRRRWTRSQW True PC9_epitope_Rep6 1702.8705449554998 1702.86889490379 43.214 3 -0.38616941838255603 0.10214110823623387 0.9438714419765777 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 7802 3574 ASYVASTKYQK True NCI_RA007_Epitope_Rep4 1244.6401020414398 1244.63845490379 19.776 3 -0.3862381305286741 0.10219142876988262 0.9438714419765777 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'ENST00000522792.1_1_5:138268134-138269775:+|nuORF', 'nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 12743 5578 DLGPMGVPER True NCI_RA007_Epitope_Rep2 1069.52262976105 1069.5215299358601 26.312 2 -0.386287005158886 0.10220346929207688 0.9438714419765777 ['COL6A3|p.G2183E|1|0.31|ENSG00000163359|chr2:237357381-237357381|C/T|missense_variant'] 83403 17012 QAVIAEQLA True PC9_epitope_Rep3 941.5181960036099 941.51708993586 70.593 2 -0.38634289840060787 0.10220346929207688 0.9438714419765777 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 119590 8238 VERQHTQI True PC9_epitope_Rep3 1009.53049202281 1009.52938993586 36.665 2 -0.3863543317969161 0.10220346929207688 0.9438714419765777 ['ENSG00000101752|ENST00000261537|MIB1'] 56519 16352 LDTVTMQVTA True PC9_epitope_Rep4 1077.53761111885 1077.53650993586 70.862 2 -0.3864401714266242 0.10223642172523961 0.9438714419765777 ['ENSG00000181789|ENST00000314797|COPG1'] 62800 14011 LMFCGCLEDY True H1975_Epitope_Rep2 1192.4602893982799 1192.4591899358602 59.042 2 -0.38651952471508655 0.102244908588989 0.9438714419765777 ['ASTN1|p.I687L|1|0.07|ENSG00000152092|chr1:176946116-176946116|T/G|missense_variant'] 15479 7271 EAQAELQKRDE True NCI_RA007_Epitope_Rep2 1315.63680756615 1315.6357099358602 32.903 2 -0.38652144833138424 0.102244908588989 0.9438714419765777 ['DIAPH2|p.R928Lfs*20|1|0.47|ENSG00000147202|chrX:97247778-97247778|G/-|frameshift_variant', 'nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 33035 6983 GKAAPAEAL True PC9_epitope_Rep1 826.45486747106 826.45376993586 31.665 2 -0.38653865115981756 0.102244908588989 0.9438714419765777 ['ENSG00000116198|ENST00000378230|CEP104'] 17655 4772 EHRGPVQVT True PC9_epitope_Rep4 1021.53049202281 1021.52938993586 24.927 2 -0.38657870260444366 0.102244908588989 0.9438714419765777 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'chr19:38596001-38596078|190|16.73|0.04|8.81|-|2|MAP4K1,None|3', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF'] 84315 9339 QFKSEVESL True PC9_epitope_Rep5 1065.5342399905699 1065.5331499358601 40.876 2 -0.3866237471021598 0.102244908588989 0.9438714419765777 ['CNOT3|p.E143K|1|0.13|ENSG00000088038|chr19:54144276-54144276|G/A|missense_variant'] 108616 11486 TEIQKWSVS True PC9_epitope_Rep1 1076.5502244078798 1076.54912993586 49.061 2 -0.3866340009928008 0.10225871976944044 0.9438714419765777 ['COL12A1|p.C133W|1|0.09|ENSG00000111799|chr6:75189811-75189811|G/C|missense_variant'] 39891 19762 HQIVLCKSSD True PC9_epitope_Rep1 1128.55974354576 1128.55864993586 80.841 2 -0.3866970303238063 0.10225871976944044 0.9438714419765777 ['ADAMTS6|p.R982Q|2|0.69|ENSG00000049192|chr5:65172974-65172974|C/T|missense_variant'] 66463 8691 LSRRFQYR True PC9_epitope_Rep1 1124.6203100867199 1124.6186549037902 38.27 3 -0.38680312115940196 0.10227252999079878 0.9438714419765777 ['ENSG00000102174|ENST00000379374|PHEX'] 108805 4357 TEQIRREIAA True H1975_Epitope_Rep2 1185.6465844042102 1185.64492490379 21.874 3 -0.38685320488346525 0.10227252999079878 0.9438714419765777 ['ENSG00000019995|ENST00000359653|ZRANB1'] 39162 5244 HLERRHVQY True NCI_RA007_Epitope_Rep2 1236.64758746372 1236.64594490379 25.02 3 -0.38689752520942244 0.10228811499600708 0.9438714419765777 ['ENST00000436105.1_1_7:43549553-43549670:-|nuORF'] 111118 21207 TLELNVLV True PC9_epitope_Rep2 899.53278343859 899.53168993586 87.03 2 -0.38711763114359926 0.1023384198739649 0.9438714419765777 ['ENSG00000149564|ENST00000278927|ESAM', 'ENST00000485116.5_1_11:124623544-124626668:-|nuORF'] 77976 14886 PALICLHPLFI True PC9_epitope_Rep4 1235.71003660791 1235.7089299358602 65.196 2 -0.38717263855978706 0.1023695859734398 0.9438714419765777 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 70700 9010 MDPFNHRIF True NCI_RA007_Epitope_Rep3 1175.5545985956699 1175.5535099358601 42.536 2 -0.3872055367078663 0.1023695859734398 0.9438714419765777 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 121481 9541 VGKAVENLI True NCI_RA007_Epitope_Rep3 941.55458151233 941.55348993586 44.616 2 -0.3872349764459952 0.10238516821164462 0.9438714419765777 ['nc|ENSG00000091157|Q9Y4E6-2|WDR7', 'ENSG00000091157|ENST00000254442|WDR7'] 44610 12848 IPHSIPLEQ True PC9_epitope_Rep1 1032.56039516876 1032.55928993586 54.294 2 -0.3873065487920049 0.10240074990886525 0.9438714419765777 ['nc|ENSG00000198690|Q9Y2M0-2|FAN1', 'ENSG00000198690|ENST00000362065|FAN1'] 80687 12716 PLPVPPPTG True PC9_epitope_Rep1 873.49600400705 873.49490993586 53.784 2 -0.38733042140541457 0.10241633106512985 0.9438714419765777 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 48349 2748 KDYRKAEGERE True H1975_Epitope_Rep3 1379.6793410844696 1379.67769490379 14.653 3 -0.38736734005391493 0.10241946681477368 0.9438714419765777 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 66688 18237 LSTCSSHLIL True PC9_epitope_Rep5 1072.5586809166 1072.55758993586 75.163 2 -0.38740059503956165 0.10241946681477368 0.9438714419765777 ['ENSG00000180919|ENST00000316529|OR56B4'] 15481 7946 EAQCCSPTV True NCI_RA007_Epitope_Rep3 936.3681032656 936.36700993586 38.362 2 -0.3874019125988109 0.10241946681477368 0.9438714419765777 ['ENST00000514938.1_1_22:50943492-50943879:-|nuORF', 'ENST00000474879.6_3_22:50943492-50943863:-|nuORF'] 71042 4159 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 21.116 2 -0.3874178997318578 0.10241946681477368 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 27024 10020 FLLPRLDTSNE True NCI_RA007_Epitope_Rep1 1303.67721582615 1303.67610993586 42.982 2 -0.38742102672523043 0.10241946681477368 0.9438714419765777 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1', 'ENST00000527071.1_1_8:145254030-145268916:+|nuORF', 'nc|ENSG00000179832|Q8NDA8-6|MROH1', 'nc|ENSG00000179832|Q8NDA8-4|MROH1'] 78651 6757 PDYKYQPRRRK True H1975_Epitope_Rep1 1505.82152907441 1505.81989490379 31.03 3 -0.3874213551646312 0.10241946681477368 0.9438714419765777 ['ENSG00000125398|ENST00000245479|SOX9', 'SOX9|p.P374Rfs*9|1|0.29|ENSG00000125398|chr17:72123974-72123974|C/-|frameshift_variant', 'nc|ENSG00000100146|P56693-2|SOX10', 'ENST00000566034.1_1_16:1033566-1035383:+|nuORF', 'ENSG00000005513|ENST00000293894|SOX8', 'nc|ENSG00000100146|P56693|SOX10', 'ENSG00000100146|ENST00000396884|SOX10'] 44384 17201 INDVKELIEEK True H1975_Epitope_Rep1 1328.71874628496 1328.7176499358602 71.619 2 -0.387446684910526 0.10241946681477368 0.9438714419765777 ['ENSG00000109576|ENST00000337664|AADAT', 'nc|ENSG00000109576|Q8N5Z0-2|AADAT'] 20630 19430 EQFFILTG True PC9_epitope_Rep4 953.4858332461698 953.48472993586 82.85 2 -0.38745322005027133 0.10241946681477368 0.9438714419765777 ['ENSG00000130948|ENST00000375263|HSD17B3', 'nc|ENSG00000130948|P37058-2|HSD17B3'] 43943 8324 ILERRRRRLRL True PC9_epitope_Rep6 1535.9960798217896 1535.99498993586 41.65 2 -0.38750187216578497 0.10245240120103442 0.9438714419765777 ['ENST00000265070.6_1_5:32174239-32174446:-|nuORF'] 56636 13565 LDYVSQDAP True H1975_Epitope_Rep2 1006.4607406971398 1006.4596499358599 57.315 2 -0.38759015449870565 0.10248312481563102 0.9438714419765777 ['ENST00000600534.1_1_19:59084484-59085060:+|nuORF'] 59945 15799 LHLLGCLL True PC9_epitope_Rep1 880.5204449330801 880.51934993586 65.582 2 -0.38764176990932026 0.10248312481563102 0.9438714419765777 ['ENSG00000130821|ENST00000253122|SLC6A8', 'ENST00000485324.1_1_X:152959908-152960666:+|nuORF', 'nc|ENSG00000130821|P48029-3|SLC6A8', 'ENST00000431994.5_1_16:32890029-32891910:-|nuORF', 'nc|ENSG00000130821|P48029-4|SLC6A8', 'nc|ENSG00000130821|P48029-2|SLC6A8'] 91577 6836 RPAPQIQYRRL True PC9_epitope_Rep5 1396.80515073428 1396.8034949037901 31.266 3 -0.3876941588331715 0.10248312481563102 0.9438714419765777 ['ENSG00000197696|ENST00000360476|NMB'] 708 10680 AAVGVLKAV True PC9_epitope_Rep4 826.5276384884999 826.52654993586 48.826 2 -0.3876979787157673 0.10248312481563102 0.9438714419765777 ['ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF', 'ENST00000468035.1_1_7:77394853-77402638:+|nuORF', 'ENST00000462800.1_1_7:77397938-77402638:+|nuORF', 'ENSG00000187257|ENST00000334955|RSBN1L', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L'] 8846 9204 AVFPSIVGRPR True NCI_RA007_Epitope_Rep4 1197.69822605425 1197.6965849037902 42.251 3 -0.38770788881106355 0.10248312481563102 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 60289 18843 LIEPSEEP True PC9_epitope_Rep3 912.4440280038399 912.44292993586 77.701 2 -0.3878027661239037 0.10248312481563102 0.9438714419765777 ['ACAN|p.G1996E|1|0.14|ENSG00000157766|chr15:88858572-88858572|G/A|missense_variant'] 46500 15792 ITPGGFSSV True PC9_epitope_Rep5 863.43888305375 863.43833496793 65.732 1 -0.3878296657778581 0.10248312481563102 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 19521 16739 ELQPVPSP True PC9_epitope_Rep1 865.4545331178899 865.45342993586 69.215 2 -0.38783805052970854 0.10248312481563102 0.9438714419765777 ['ENST00000542440.5_1_12:122268574-122269003:+|nuORF'] 140572 6349 YYLRSPQAK True PC9_epitope_Rep5 1124.5978433066398 1124.5961849037901 29.397 3 -0.38784278739893113 0.10248312481563102 0.9438714419765777 ['SLC18A1|p.P482Q|1|0.45|ENSG00000036565|chr8:20147277-20147277|G/T|missense_variant'] 9188 16051 AVPEEGLAQV True PC9_epitope_Rep5 1011.5236753068697 1011.52256993586 66.728 2 -0.3878474203066407 0.10248312481563102 0.9438714419765777 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant', 'nc|ENSG00000182095|O15417-4|TNRC18'] 70194 21991 LYLPFSLTF True NCI_RA007_Epitope_Rep5 1099.59538369515 1099.5942899358602 91.722 2 -0.38785022464162006 0.10248312481563102 0.9438714419765777 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 72706 21164 MYPDVFAHF True PC9_epitope_Rep5 1125.4953523840497 1125.4942499358601 86.461 2 -0.387853772119634 0.10248312481563102 0.9438714419765777 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 127220 14515 VQIEHISSL True PC9_epitope_Rep1 1024.5553097883198 1024.5542099358602 60.656 2 -0.38789349918273885 0.10251249305941144 0.9438714419765777 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 94000 24210 RVPWWRLGRGR True NCI_RA007_Epitope_Rep2 1437.8218038579298 1437.82015490379 101.67 3 -0.38791709713845196 0.10251249305941144 0.9438714419765777 ['ENST00000544450.6_1_14:100605290-100605623:+|nuORF'] 97221 11014 SFLDSLLAT True H1975_Epitope_Rep3 965.50696261357 965.50586993586 47.455 2 -0.38792908727764736 0.10251249305941144 0.9438714419765777 ['ENSG00000215262|ENST00000399881|KCNU1'] 126054 13321 VPASCVGNVP True PC9_epitope_Rep3 941.46405225577 941.46294993586 56.273 2 -0.38800870575497864 0.10252806551801918 0.9438714419765777 ['ENST00000380358.8_2_17:7814903-7815650:+|nuORF'] 85033 9906 QIIKGSKDV True PC9_epitope_Rep2 986.5760452328999 986.57494993586 43.434 2 -0.38828206082715017 0.10264596165524421 0.9438714419765777 ['nc|ENSG00000044459|Q9NXG0|CNTLN', 'ENSG00000044459|ENST00000380647|CNTLN'] 14724 10752 DVSASSEELFL True H1975_Epitope_Rep1 1195.5608486612298 1195.55920490379 46.319 3 -0.38829630166553 0.10264596165524421 0.9438714419765777 ['NUDT7|p.L220S|2|0.22|ENSG00000140876|chr16:77741892-77741892|T/C|missense_variant'] 43185 12292 IGSSILFMLA True H1975_Epitope_Rep3 1050.57835373202 1050.5772499358602 52.459 2 -0.3883215480249341 0.10265796870120407 0.9438714419765777 ['ENST00000526443.5_1_11:14535901-14541492:-|nuORF', 'ENST00000528307.5_1_11:14535901-14541893:-|nuORF'] 81726 21356 PSAIIILGSA True PC9_epitope_Rep5 940.5593325396 940.55822993586 87.205 2 -0.3883389929001636 0.10265796870120407 0.9438714419765777 ['nc|ENSG00000161270|O60500-2|NPHS1', 'ENSG00000161270|ENST00000378910|NPHS1'] 129021 14421 VTAATLQAGV True PC9_epitope_Rep3 929.5181960036098 929.51708993586 60.575 2 -0.38839369832342796 0.10265796870120407 0.9438714419765777 ['ENST00000518143.1_1_8:77528581-77585127:-|nuORF'] 138188 13853 YQQQQSLAL True PC9_epitope_Rep4 1077.54547338061 1077.54436993586 61.186 2 -0.3884062923457667 0.10267353701486841 0.9438714419765777 ['ENSG00000106546|ENST00000242057|AHR'] 131798 9929 VYANGIRNI True PC9_epitope_Rep2 1018.5559784946599 1018.55488993586 43.524 2 -0.38844195340003945 0.10268732325948543 0.9438714419765777 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 47308 20035 IYGEGFQTW True PC9_epitope_Rep4 1099.4974605590298 1099.49687496793 85.202 1 -0.38845175517005454 0.10268732325948543 0.9438714419765777 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 77779 5479 PADLGPRAQSP True H1975_Epitope_Rep3 1107.56727145435 1107.5661699358602 26.129 2 -0.3885690331659419 0.10270289025363451 0.9438714419765777 ['ENSG00000146950|ENST00000380913|SHROOM2'] 19799 11971 ELTKKHWDL True PC9_epitope_Rep2 1168.62405805448 1168.62296993586 51.366 2 -0.38858976067975237 0.1027340226216085 0.9438714419765777 ['ENSG00000214946|ENST00000437605|TBC1D26'] 31428 7057 GEDNMEDPP True H1975_Epitope_Rep2 1002.3600406796999 1002.35894993586 32.071 2 -0.3886336216920168 0.1027340226216085 0.9438714419765777 ['CON__Q3Y5Z3'] 60851 22479 LKLQVDQWKVP True PC9_epitope_Rep3 1352.78162132504 1352.7805299358602 91.74 2 -0.3886732126813369 0.10274780557193908 0.9438714419765777 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 28397 8141 FSDVHFDSKVK True H1975_Epitope_Rep3 1307.6510010783102 1307.64990993586 36.291 2 -0.38868913807883576 0.10274780557193908 0.9438714419765777 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1-ZNF346|6|fusion', 'NSD1-C11orf58|2|fusion', 'NSD1-ZNF346|5|fusion', 'NSD1-ZNF346|4|fusion', 'NSD1-C11orf58|1|fusion', 'NSD1-ZNF346|8|fusion', 'NSD1-ZNF346|3|fusion', 'NSD1-ZNF346|7|fusion', 'NSD1|p.C2138Sfs*12|1|0.47|ENSG00000165671|chr5:177292108-177292108|G/-|frameshift_variant'] 42883 22134 IFSLFDIYS True PC9_epitope_Rep4 1103.55391280599 1103.55337496793 93.354 1 -0.3887728130237114 0.10281541103613372 0.9438714419765777 ['ENST00000301919.8_1_11:105878863-105879127:-|nuORF'] 112579 9279 TPAPHSPWTA True PC9_epitope_Rep6 1063.50869394907 1063.50758993586 45.848 2 -0.3887955348139906 0.10284296889906507 0.9438714419765777 ['nc|ENSG00000135677|P15586-2|GNS', 'ENSG00000135677|ENST00000258145|GNS'] 108297 16252 TEDARTILEL True PC9_epitope_Rep2 1159.6084675599898 1159.60736993586 67.756 2 -0.38883472988571544 0.10284296889906507 0.9438714419765777 ['ENSG00000005189|ENST00000261377|REXO5', 'nc|ENSG00000005189|Q96IC2-2|REXO5'] 106378 7400 SVSSLCKLYFR True NCI_RA007_Epitope_Rep2 1301.6801930316099 1301.67908993586 33.41 2 -0.3888813511186566 0.10284296889906507 0.9438714419765777 ['ARHGAP33|p.G761Afs*35|1|0.13|ENSG00000004777|chr19:35787326-35787326|G/-|frameshift_variant', 'nc|ENSG00000004777|O14559-11|ARHGAP33', 'ENSG00000004777|ENST00000007510|ARHGAP33', 'nc|ENSG00000004777|O14559-10|ARHGAP33'] 129051 5512 VTALSREQFFK True NCI_RA007_Epitope_Rep5 1324.7139356880396 1324.71229490379 27.89 3 -0.38889507074292107 0.10284296889906507 0.9438714419765777 ['ENST00000460321.5_1_3:118935188-118955715:-|nuORF', 'B4GALT4|p.G255Dfs*18|1|0.19|ENSG00000121578|chr3:119218683-119218683|C/-|frameshift_variant', 'ENSG00000121578|ENST00000393765|B4GALT4'] 98954 13298 SKDLNIVIA True PC9_epitope_Rep2 971.5651461960299 971.56404993586 56.428 2 -0.38895545439547774 0.10287587594532714 0.9438714419765777 ['ENST00000471856.1_1_1:146649692-146651075:+|nuORF'] 2986 19014 AFLSLNIAV True PC9_epitope_Rep3 946.5487678559 946.54766993586 78.359 2 -0.3889770312341319 0.1028896520623027 0.9438714419765777 ['ENSG00000149516|ENST00000278865|MS4A3', 'nc|ENSG00000149516|Q96HJ5-3|MS4A3', 'nc|ENSG00000149516|Q96HJ5-2|MS4A3'] 34153 13639 GPEITEMDDP True H1975_Epitope_Rep2 1102.4488556841 1102.4477499358602 57.602 2 -0.3889863508201688 0.1028896520623027 0.9438714419765777 ['nc|ENSG00000111834|Q5TD94-2|RSPH4A', 'ENSG00000111834|ENST00000229554|RSPH4A'] 41275 10777 IAGEAPGV True H1975_Epitope_Rep2 712.3755545211999 712.3750049679301 46.483 1 -0.38906712118942705 0.10292255658659266 0.9438714419765777 ['ENSG00000132881|ENST00000375599|CPLANE2'] 129889 14577 VTLSVPNVS True PC9_epitope_Rep1 914.50729696674 914.50618993586 60.894 2 -0.3891564557929714 0.10297101826317706 0.9438714419765777 ['RABGAP1-TTLL11|1|fusion', 'RABGAP1-TTLL11|2|fusion', 'nc|ENSG00000188394|Q9Y3P9-3|RABGAP1', 'nc|ENSG00000188394|Q9Y3P9-2|RABGAP1', 'nc|ENSG00000188394|Q9Y3P9-4|RABGAP1', 'ENST00000317419.7_1_9:125719338-125751780:+|nuORF', 'ENSG00000011454|ENST00000373647|RABGAP1'] 117917 13541 VAQLKQLQAET True PC9_epitope_Rep4 1227.6823012065897 1227.6812099358601 59.981 2 -0.3891579707055025 0.10297101826317706 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E', 'ENST00000518442.5_1_8:109247181-109261015:-|nuORF'] 118971 15415 VEFASYGDL True PC9_epitope_Rep4 999.4549270407099 999.45382993586 67.226 2 -0.38927965638251055 0.10302126331124908 0.9438714419765777 ['nc|ENSG00000100650|Q13243-3|SRSF5', 'ENSG00000100650|ENST00000557154|SRSF5', 'ENST00000554465.5_1_14:70237039-70238175:+|nuORF', 'ENST00000554929.1_1_14:70237619-70238175:+|nuORF'] 129163 4298 VTDEAGHPVP True NCI_RA007_Epitope_Rep5 1020.4876241513199 1020.48652993586 23.12 2 -0.38938001097585995 0.10303808004439204 0.9438714419765777 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 97020 9201 SEVQYIQEA True NCI_RA007_Epitope_Rep4 1065.4978544818498 1065.4967499358602 42.237 2 -0.3893989863317672 0.10303808004439204 0.9438714419765777 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1', 'ENST00000461859.1_1_1:151535003-151537177:+|nuORF'] 57866 14263 LEQELDFILS True PC9_epitope_Rep1 1205.61796961453 1205.6168699358602 59.686 2 -0.38943981774387254 0.10303808004439204 0.9438714419765777 ['ENSG00000198088|ENST00000372466|NUP62CL'] 10692 7932 CSKRREENFR True NCI_RA007_Epitope_Rep2 1323.6466014875498 1323.6455099358602 35.486 2 -0.38945859469996896 0.10303808004439204 0.9438714419765777 ['ENST00000564814.1_1_16:58426144-58426288:+|nuORF'] 21650 7685 ERTSFNYAM-[Oxidation] True PC9_epitope_Rep2 1133.4811592523297 1133.48006993586 34.929 2 -0.38947489158264165 0.10303808004439204 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 43338 7623 IHHWRDRRHQK True NCI_RA007_Epitope_Rep2 1567.8344937999502 1567.8328349037902 34.276 3 -0.38948125665830735 0.10303808004439204 0.9438714419765777 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T'] 19238 4619 ELLCCHVLGGP True NCI_RA007_Epitope_Rep2 1139.54673633391 1139.54562993586 22.592 2 -0.38948571201991034 0.10303808004439204 0.9438714419765777 ['ENST00000431580.1_1_20:25715449-25715602:+|nuORF'] 40623 6552 HTFCRLCLP True NCI_RA007_Epitope_Rep1 1088.52594131968 1088.5248499358602 29.5 2 -0.3895053332812397 0.10303808004439204 0.9438714419765777 ['nc|ENSG00000204610|Q9C019-2|TRIM15', 'ENSG00000204610|ENST00000376694|TRIM15'] 128335 20629 VSDLALQNA True PC9_epitope_Rep2 929.4818104948899 929.48070993586 84.783 2 -0.38953680842871974 0.10303808004439204 0.9438714419765777 ['ENSG00000163637|ENST00000638394|PRICKLE2'] 57541 9655 LEKTDGSV True PC9_epitope_Rep3 847.4287122928699 847.42760993586 42.086 2 -0.38956993758736636 0.10303808004439204 0.9438714419765777 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A'] 65484 10745 LSFLFQLSF True PC9_epitope_Rep3 1100.5906326678798 1100.5895299358601 46.284 2 -0.3896294456793363 0.10305363366800187 0.9438714419765777 ['nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF', 'ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 3225 12578 AGEYPSPVCL True H1975_Epitope_Rep2 1034.4742825862998 1034.47318993586 53.476 2 -0.3897079300074313 0.10306561242890831 0.9438714419765777 ['ENST00000604504.5_1_19:35607238-35610445:+|nuORF'] 123572 14591 VIIQRFWRNYL True NCI_RA007_Epitope_Rep4 1506.8459529170998 1506.84484993586 63.507 2 -0.3897397859229176 0.10306561242890831 0.9438714419765777 ['nc|ENSG00000066933|B2RTY4-5|MYO9A', 'nc|ENSG00000066933|B2RTY4-2|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A', 'MYO9A|p.R1220Vfs*8|1|0.12|ENSG00000066933|chr15:71898845-71898845|G/-|frameshift_variant', 'ENST00000563542.5_1_15:72185266-72338904:-|nuORF'] 111649 18210 TLNWPIEAF True PC9_epitope_Rep3 1089.5494961318898 1089.54838993586 75.258 2 -0.3897451499698764 0.10306561242890831 0.9438714419765777 ['ENSG00000149150|ENST00000278426|SLC43A1', 'nc|ENSG00000149150|O75387-2|SLC43A1'] 95654 11725 SAVPPGTSL True PC9_epitope_Rep4 827.43888305375 827.43778993586 52.86 2 -0.3898508783288671 0.10320253844953445 0.9438714419765777 ['nc|ENSG00000164877|Q8IY33-4|MICALL2', 'ENST00000472100.5_1_7:1481822-1498962:-|nuORF', 'nc|ENSG00000164877|Q8IY33-2|MICALL2', 'nc|ENSG00000164877|Q8IY33-5|MICALL2', 'ENSG00000164877|ENST00000297508|MICALL2'] 55448 7243 LATVTVRP True H1975_Epitope_Rep2 855.5178020807899 855.51670993586 32.794 2 -0.3898624493497517 0.10321808787321843 0.9438714419765777 ['ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 128566 16315 VSILVIKNP True PC9_epitope_Rep6 981.62226714933 981.6211699358599 75.121 2 -0.3899450441690959 0.10324202496532593 0.9438714419765777 ['ZBTB37|p.S72L|1|0.21|ENSG00000185278|chr1:173870440-173870440|C/T|missense_variant'] 28955 13226 FTESEKKFI True PC9_epitope_Rep1 1127.5862755634298 1127.5846349037902 55.738 3 -0.3899753568983991 0.10324202496532593 0.9438714419765777 ['ENSG00000133116|ENST00000380099|KL', 'nc|ENSG00000133116|Q9UEF7-2|KL'] 105238 9339 STSDFCNY True H1975_Epitope_Rep2 935.33309765587 935.33200993586 40.883 2 -0.3899793566984431 0.10324202496532593 0.9438714419765777 ['OTOS|p.W48C|1|0.2|ENSG00000178602|chr2:240139296-240139296|C/A|missense_variant'] 105987 10876 SVLKEVYQA True PC9_epitope_Rep4 1035.5600608155898 1035.5589699358602 49.598 2 -0.3899938085302077 0.10324202496532593 0.9438714419765777 ['nc|ENSG00000147099|Q9BY41-4|HDAC8', 'ENSG00000147099|ENST00000373573|HDAC8'] 63032 20095 LNIMEEYDWYI True PC9_epitope_Rep2 1487.6642681839498 1487.6626349037901 82.704 3 -0.3900371482713584 0.10324202496532593 0.9438714419765777 ['ENSG00000273079|ENST00000609686|GRIN2B'] 19331 12547 ELNAEIVLNSA True H1975_Epitope_Rep2 1171.60846755999 1171.60736993586 53.356 2 -0.39004517761118856 0.10324202496532593 0.9438714419765777 ['CFAP58|p.V73L|2|0.23|ENSG00000120051|chr10:104358548-104358548|G/T|missense_variant'] 123332 17200 VHVFVDELSL True PC9_epitope_Rep4 1156.6128246644398 1156.61172993586 74.166 2 -0.39007957064514154 0.10325757181740955 0.9438714419765777 ['TNFSF13B|p.G221V|1|0.43|ENSG00000102524|chr13:108303521-108303521|G/T|missense_variant'] 77751 6408 PAAPRQVPV True PC9_epitope_Rep5 933.5396001545298 933.53850993586 29.626 2 -0.3903312281747026 0.10339447314586873 0.9438714419765777 ['ENST00000478344.6_1_9:140240296-140248823:-|nuORF', 'nc|ENSG00000187609|Q8N9H8-2|EXD3', 'ENST00000487745.5_1_9:140201404-140247406:-|nuORF', 'ENSG00000187609|ENST00000340951|EXD3'] 56509 6933 LDTRGELQAA True NCI_RA007_Epitope_Rep5 1072.5512870370399 1072.55018993586 33.353 2 -0.3903713865968765 0.10341001681604632 0.9438714419765777 ['ENSG00000129028|ENST00000249861|THAP10'] 1746 4255 AEGVEAGRTEP True H1975_Epitope_Rep3 1114.5254662120199 1114.52436993586 21.483 2 -0.39038376473210645 0.103423767010488 0.9438714419765777 ['ENST00000405260.5_1_2:242089625-242089673:-|nuORF'] 81459 21596 PQLAKFSP True PC9_epitope_Rep5 886.4912529797799 886.49070496793 88.111 1 -0.3904072920951388 0.103423767010488 0.9438714419765777 ['nc|ENSG00000115419|O94925-3|GLS', 'ENSG00000115419|ENST00000320717|GLS', 'ENST00000469774.1_1_2:191760380-191769916:+|nuORF'] 57773 6423 LEPACHVTSKF True H1975_Epitope_Rep1 1230.60669373818 1230.60505490379 29.766 3 -0.39044605835229734 0.10343930936449051 0.9438714419765777 ['nc|ENSG00000126970|Q9NQZ6-4|ZC4H2'] 20928 14187 EQVLLLFKDS True NCI_RA007_Epitope_Rep1 1190.65468947642 1190.65358993586 59.219 2 -0.3904973015303555 0.10345485117964186 0.9438714419765777 ['ENSG00000181544|ENST00000650831|FANCB'] 106223 15679 SVPNKDVFQEL True PC9_epitope_Rep6 1274.65066672514 1274.6495699358602 72.519 2 -0.3906083817778808 0.10351880741896342 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 45647 13747 ISICKMQEV True PC9_epitope_Rep2 1049.5249382601698 1049.5238499358602 58.165 2 -0.3906718707542067 0.10351880741896342 0.9438714419765777 ['nc|ENSG00000186976|Q5THR3-3|EFCAB6', 'nc|ENSG00000186976|Q5THR3-5|EFCAB6', 'nc|ENSG00000186976|Q5THR3-2|EFCAB6', 'ENSG00000186976|ENST00000262726|EFCAB6'] 140417 18141 YYFDYKEQL True PC9_epitope_Rep4 1267.57610480255 1267.5750099358602 77.845 2 -0.3906861958461438 0.10351880741896342 0.9438714419765777 ['ENST00000592001.5_1_19:38865430-38871817:+|nuORF', 'ENSG00000099341|ENST00000215071|PSMD8'] 79769 11380 PHVLLATE True PC9_epitope_Rep1 878.4861675993401 878.48506993586 48.654 2 -0.39070709406829335 0.10353434677852698 0.9438714419765777 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|164|3|sense'] 109458 13731 TGTLVITDP True NCI_RA007_Epitope_Rep1 915.49131254943 915.4907649679301 57.426 1 -0.39078350306560966 0.10354629597531806 0.9438714419765777 ['nc|ENSG00000018236|Q12860-2|CNTN1', 'ENSG00000018236|ENST00000551295|CNTN1', 'CNTN1|p.S495I|1|0.29|ENSG00000018236|chr12:40943701-40943701|G/T|missense_variant', 'nc|ENSG00000018236|Q12860-3|CNTN1', 'CNTN1|p.A745Hfs*30|1|0.36|ENSG00000018236|chr12:41016729-41016729|G/-|frameshift_variant'] 65208 5180 LSEAETLTH True NCI_RA007_Epitope_Rep2 999.4872897981502 999.48618993586 24.77 2 -0.390787456605593 0.10354629597531806 0.9438714419765777 ['ENST00000560323.1_1_15:48607144-48623929:-|nuORF'] 137677 21872 YMFILQAVLLL True NCI_RA007_Epitope_Rep2 1322.7672171308598 1322.7655649037902 90.677 3 -0.39079925301272583 0.10354629597531806 0.9438714419765777 ['OR52K2|p.I221M|1|0.43|ENSG00000181963|chr11:4450002-4450002|C/G|missense_variant'] 100808 13323 SLRTALILH True PC9_epitope_Rep2 1022.62366413166 1022.62256993586 56.52 2 -0.3909221051416484 0.1035791663055724 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 129107 8333 VTAVSLPR True PC9_epitope_Rep6 841.5021520166499 841.50104993586 41.697 2 -0.39094222139169393 0.10359290777683415 0.9438714419765777 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 13253 13838 DLVKVSEILK True PC9_epitope_Rep4 1142.69107498514 1142.68942490379 61.127 3 -0.3909667429337925 0.10359290777683415 0.9438714419765777 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant'] 68273 5242 LTRIRPRRLLR True NCI_RA007_Epitope_Rep2 1448.95281802748 1448.9511749037902 25.011 3 -0.39100310844511693 0.10360844396686193 0.9438714419765777 ['ENST00000483554.1_1_17:27043919-27044341:-|nuORF'] 67970 17854 LTLPSHRMP True PC9_epitope_Rep1 1050.56443500338 1050.56332993586 73.47 2 -0.39105784744908717 0.10362397961836427 0.9438714419765777 ['ENST00000299613.10_1_11:9596239-9596734:+|nuORF'] 71919 7526 MPRQLSAAAA True PC9_epitope_Rep2 1014.5280494946599 1014.52694993586 34.316 2 -0.3911650355479411 0.10369150779896014 0.9438714419765777 ['ENSG00000078081|ENST00000265598|LAMP3'] 119953 9126 VEYLRNNFR True PC9_epitope_Rep1 1209.62545503681 1209.62380490379 39.955 3 -0.39129114125135667 0.10370704147241816 0.9438714419765777 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG'] 79378 18853 PGLGIFGSTS True PC9_epitope_Rep5 934.47599683846 934.47544496793 77.536 1 -0.3915243637439998 0.10382655713840075 0.9438714419765777 ['ENST00000583028.1_1_17:62175367-62207458:-|nuORF', 'ENST00000584041.1_1_17:62152499-62207458:-|nuORF', 'ENSG00000178607|ENST00000433197|ERN1'] 74534 13034 NKYWEAGFF True PC9_epitope_Rep5 1160.52909504048 1160.52745490379 55.139 3 -0.39169085239363155 0.10384208793303641 0.9438714419765777 ['ENST00000360325.11_1_17:7163361-7163544:-|nuORF'] 58360 23074 LEVEQVIPL True PC9_epitope_Rep5 1038.5961119711396 1038.5950099358602 93.739 2 -0.39175960340885196 0.10387494801053652 0.9438714419765777 ['ENSG00000174840|ENST00000311180|PDE12', 'ENST00000487257.1_2_3:57545269-57545728:+|nuORF'] 10113 13665 AYWTPEDTVP True PC9_epitope_Rep3 1177.5291546101298 1177.52804993586 57.626 2 -0.3917715255364502 0.10389047742829911 0.9438714419765777 ['ENST00000600775.5_1_19:58740851-58758098:+|nuORF'] 2597 5110 AESKVSVAV True H1975_Epitope_Rep1 888.4916469025999 888.49054993586 24.725 2 -0.39177857701432356 0.10390240521244888 0.9438714419765777 ['ENSG00000139218|ENST00000369367|SCAF11', 'nc|ENSG00000139218|Q99590-2|SCAF11', 'ENST00000550629.1_1_12:46313059-46318516:-|nuORF'] 92590 4994 RRDNTFYYYNK True NCI_RA007_Epitope_Rep1 1538.7266256300597 1538.72497490379 23.509 3 -0.3917838113152327 0.10390240521244888 0.9438714419765777 ['ENSG00000197889|ENST00000407572|MEIG1'] 121732 5054 VGLRHEKYF True PC9_epitope_Rep6 1147.61382772395 1147.61218490379 27.08 3 -0.39179341242362764 0.10390240521244888 0.9438714419765777 ['MRC1|p.P559H|1|0.08|ENSG00000260314|chr10:17863575-17863575|C/A|missense_variant'] 101523 6414 SPAKLQAAAT True NCI_RA007_Epitope_Rep4 956.5290950404799 956.52798993586 31.272 2 -0.3918025140856191 0.10391793307802942 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 60411 18833 LIKENGPLSP True PC9_epitope_Rep1 1066.60225998074 1066.60116993586 77.226 2 -0.39183066722424253 0.10393165947566321 0.9438714419765777 ['ENST00000528749.1_1_1:150934626-150935279:+|nuORF'] 45755 19501 ISNFAQEAL True PC9_epitope_Rep2 991.4974605590298 991.49636993586 80.393 2 -0.39186867094613 0.10393165947566321 0.9438714419765777 ['ENSG00000140905|ENST00000315467|GCSH'] 677 13309 AAVDAGMAM True PC9_epitope_Rep2 835.35681030591 835.35570993586 56.469 2 -0.3920562067350892 0.10399916828389243 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 116314 9206 TVWLCWDMQ True NCI_RA007_Epitope_Rep3 1180.50453716876 1180.5034299358601 43.306 2 -0.3921184244127188 0.10401469339663508 0.9438714419765777 ['ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'ENST00000476117.1_1_7:104800923-104844162:-|nuORF'] 99729 8399 SLGHPCFYHQK True H1975_Epitope_Rep1 1315.6131761009499 1315.61206993586 37.234 2 -0.3921655883973082 0.10408219842672488 0.9438714419765777 ['THEMIS|p.R111S|1|0.27|ENSG00000172673|chr6:127829852-127829852|T/A|missense_variant'] 14942 7475 DYNENGSNFSK True NCI_RA007_Epitope_Rep2 1273.52110910757 1273.5200099358601 33.704 2 -0.39218979811508925 0.10409772156285195 0.9438714419765777 ['ENSG00000198105|ENST00000395867|ZNF248'] 140939 13337 YYYVKNII True NCI_RA007_Epitope_Rep5 1074.57498260374 1074.57388993586 57.987 2 -0.3922337667059632 0.10411144030355009 0.9438714419765777 ['ENSG00000158711|ENST00000357992|ELK4', 'nc|ENSG00000158711|P28324-2|ELK4'] 133727 19363 WLKRRIWRMP True NCI_RA007_Epitope_Rep2 1440.82886338432 1440.82776993586 80.221 2 -0.39223628572475083 0.10411144030355009 0.9438714419765777 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 95276 10146 SADTLWGIQK True H1975_Epitope_Rep1 1117.57677350889 1117.57566993586 43.965 2 -0.39231461226223935 0.10412335412335412 0.9438714419765777 ['ENSG00000134333|ENST00000422447|LDHA', 'nc|ENSG00000134333|P00338-3|LDHA', 'nc|ENSG00000134333|P00338-4|LDHA', 'ENST00000538451.1_1_11:18424358-18428825:+|nuORF', 'ENST00000397561.3_1_9:14921337-14921451:-|nuORF'] 16686 6867 EEVENGLP True H1975_Epitope_Rep2 885.4079768482899 885.40686993586 31.332 2 -0.392332309949717 0.10412335412335412 0.9438714419765777 ['NEUROD6|p.D69V|1|0.18|ENSG00000164600|chr7:31339063-31339063|T/A|missense_variant'] 12763 17895 DLHGAIISAL True PC9_epitope_Rep1 1008.56039516876 1008.55928993586 73.626 2 -0.39236183859999296 0.10412335412335412 0.9438714419765777 ['ENST00000586136.5_1_19:30097284-30104129:+|nuORF'] 41324 9712 IAKGNNVL True PC9_epitope_Rep6 827.4865019525099 827.48540993586 47.757 2 -0.3924424876948154 0.104137070787568 0.9438714419765777 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant', 'NEB|p.L1303F|1|0.27|ENSG00000183091|chr2:151674555-151674555|T/A|missense_variant'] 105017 10294 STIHEKAMIQ True NCI_RA007_Epitope_Rep3 1156.5910436740398 1156.5899499358602 47.563 2 -0.39246668713527316 0.104137070787568 0.9438714419765777 ['ENSG00000175267|ENST00000389398|VWA3A', 'VWA3A|p.P1114Lfs*14|1|0.24|ENSG00000175267|chr16:22152568-22152568|C/-|frameshift_variant', 'nc|ENSG00000175267|A6NCI4-2|VWA3A'] 59673 15606 LGSWVSSDGT True PC9_epitope_Rep2 1007.45598966987 1007.45488993586 65.307 2 -0.39258729003224285 0.10420095279341707 0.9438714419765777 ['ENST00000471957.1_1_9:140482023-140483371:-|nuORF'] 120448 19828 VFTYVGALF True NCI_RA007_Epitope_Rep1 1015.5378688190298 1015.5372749679301 81.335 1 -0.39259067543298726 0.10420095279341707 0.9438714419765777 ['ENSG00000115310|ENST00000337526|RTN4', 'nc|ENSG00000115310|Q9NQC3-2|RTN4', 'nc|ENSG00000115310|Q9NQC3-5|RTN4', 'nc|ENSG00000115310|Q9NQC3-4|RTN4', 'nc|ENSG00000115310|Q9NQC3-6|RTN4', 'nc|ENSG00000115310|Q9NQC3-3|RTN4'] 42247 10694 IEHGIITNWD True NCI_RA007_Epitope_Rep1 1196.5825871653199 1196.5814899358602 45.588 2 -0.3925923603808669 0.10420095279341707 0.9438714419765777 ['ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ACTC1|p.D83V|1|0.14|ENSG00000159251|chr15:34793451-34793451|T/A|missense_variant'] 134586 23476 WVWALLLLAAL True PC9_epitope_Rep2 1267.76926573619 1267.7676149037902 95.771 3 -0.3926324181811579 0.10423379413089423 0.9438714419765777 ['ENSG00000138207|ENST00000371464|RBP4'] 12713 4425 DLFQQRYHHTK True NCI_RA007_Epitope_Rep4 1471.73204536367 1471.7303849037899 23.383 3 -0.39270341119408386 0.10428215077605321 0.9438714419765777 ['ENSG00000185352|ENST00000376705|HS6ST3'] 25305 13476 FEELC[Carbamidomethyl]SDLFR True H1975_Epitope_Rep1 1314.5914378762898 1314.59034993586 56.952 2 -0.3927221983056838 0.10428215077605321 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 116375 10402 TVYQYQYTNWS True NCI_RA007_Epitope_Rep1 1451.6357449369898 1451.6346499358601 44.446 2 -0.3927837522922368 0.10433231131666927 0.9438714419765777 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 71044 4345 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 21.83 2 -0.392803622352412 0.1043442111827063 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 120086 10508 VFGWVHRLR True NCI_RA007_Epitope_Rep2 1168.6617809758798 1168.66068993586 45.469 2 -0.39280800591375903 0.1043442111827063 0.9438714419765777 ['ENSG00000134440|ENST00000256854|NARS1', 'ENST00000411676.6_1_18:55274615-55283204:-|nuORF', 'nc|ENSG00000134440|O43776-2|NARS1'] 69864 20515 LYAPTILLW True NCI_RA007_Epitope_Rep4 1088.6270181766 1088.62592993586 88.828 2 -0.39282656125731424 0.1043442111827063 0.9438714419765777 ['ENSG00000081051|ENST00000395792|AFP'] 45718 12394 ISLRGEGTL True PC9_epitope_Rep5 944.5290950404799 944.52798993586 52.67 2 -0.3931021453129622 0.10440626299016212 0.9438714419765777 ['ENSG00000102313|ENST00000218436|ITIH6'] 40507 5485 HSFSSATEI True NCI_RA007_Epitope_Rep2 977.44542498617 977.44432993586 25.953 2 -0.393121457475471 0.10440626299016212 0.9438714419765777 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 32555 13577 GGTTLVITGN True PC9_epitope_Rep4 931.4974605590301 931.49691496793 60.117 1 -0.393139892151794 0.10440626299016212 0.9438714419765777 ['ENSG00000205038|ENST00000378402|PKHD1L1', 'PKHD1L1|p.G3595Efs*3|1|0.42|ENSG00000205038|chr8:109498726-109498726|G/-|frameshift_variant', 'PKHD1L1|p.S3970Mfs*9|1|0.26|ENSG00000205038|chr8:109518386-109518386|G/-|frameshift_variant', 'PKHD1L1|p.N2355Tfs*2|1|0.39|ENSG00000205038|chr8:109459652-109459652|A/-|frameshift_variant', 'PKHD1L1|p.V3282Lfs*8|1|0.21|ENSG00000205038|chr8:109486784-109486784|G/-|frameshift_variant', 'PKHD1L1|p.T1976Hfs*9|1|0.32|ENSG00000205038|chr8:109448285-109448286|-/G|frameshift_variant', 'PKHD1L1|p.G2014Vfs*4|1|0.38|ENSG00000205038|chr8:109449349-109449349|G/-|frameshift_variant'] 55239 20716 LAQAELPAI True PC9_epitope_Rep5 924.5280324113199 924.52692993586 84.742 2 -0.3931534116701134 0.10440626299016212 0.9438714419765777 ['DNAJB6-AGT|1|fusion', 'ENSG00000135744|ENST00000366667|AGT'] 96998 5901 SEVNTAAK True PC9_epitope_Rep1 818.4133965819 818.41228993586 27.514 2 -0.3931824949425015 0.10442177459861095 0.9438714419765777 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'nc|ENSG00000176225|Q86VV8-4|RTTN'] 110920 10961 TLARATSAL True PC9_epitope_Rep4 902.5185303567799 902.51742993586 49.932 2 -0.39319398921835763 0.10443728566974955 0.9438714419765777 ['ENST00000575310.1_1_17:7346921-7347071:+|nuORF'] 96480 10767 SEKIEDIFSQP True H1975_Epitope_Rep1 1291.62959692739 1291.6284899358602 46.377 2 -0.3932685328787839 0.1044574515983791 0.9438714419765777 ['nc|ENSG00000185792|Q7RTR0-2|NLRP9', 'ENSG00000185792|ENST00000332836|NLRP9'] 3415 4632 AGKNKGPPP True H1975_Epitope_Rep2 864.4817509252398 864.48064993586 22.917 2 -0.39332413682542994 0.1044574515983791 0.9438714419765777 ['NCOR1|p.D1906N|1|0.45|ENSG00000141027|chr17:16061566-16061566|C/T|missense_variant'] 126324 6946 VPKGSVSI True H1975_Epitope_Rep2 785.46470387877 785.46360993586 31.637 2 -0.3933368753888911 0.1044574515983791 0.9438714419765777 ['ENSG00000187097|ENST00000334696|ENTPD5'] 81425 14459 PQDRHFVRKD True NCI_RA007_Epitope_Rep2 1296.6687168311198 1296.6676099358601 60.905 2 -0.3933549151104343 0.1044574515983791 0.9438714419765777 ['CDKAL1-ASH1L|1|fusion', 'CDKAL1|p.P367Lfs*12|1|0.29|ENSG00000145996|chr6:21065091-21065091|C/-|frameshift_variant', 'ENSG00000145996|ENST00000274695|CDKAL1', 'nc|ENSG00000145996|Q5VV42-3|CDKAL1', 'CDKAL1-E2F3|1|fusion'] 115639 9659 TVITAAPR True PC9_epitope_Rep5 827.48650195251 827.48540993586 42.12 2 -0.39344848015830525 0.1044574515983791 0.9438714419765777 ['ENSG00000152580|ENST00000282466|IGSF10', 'nc|ENSG00000152580|Q6WRI0-3|IGSF10', 'nc|ENSG00000152580|Q6WRI0-2|IGSF10', 'ENST00000495443.1_1_3:151154479-151158406:-|nuORF'] 54580 5615 LACRPFHPK True NCI_RA007_Epitope_Rep1 1067.56985473699 1067.56874993586 25.905 2 -0.3934556609358498 0.1044574515983791 0.9438714419765777 ['ENSG00000151093|ENST00000280701|OXSM'] 126264 9962 VPHLLTEA True PC9_epitope_Rep2 878.48616759934 878.48506993586 43.65 2 -0.3934762242440816 0.1044574515983791 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 31955 12483 GESNCEWSI True PC9_epitope_Rep3 1023.39676054159 1023.3956699358599 53.042 2 -0.39352285720047786 0.1044574515983791 0.9438714419765777 ['nc|ENSG00000137261|Q5VV43-3|KIAA0319', 'nc|ENSG00000137261|Q5VV43-2|KIAA0319', 'ENSG00000137261|ENST00000378214|KIAA0319'] 128870 14897 VSSSILQGL True PC9_epitope_Rep4 902.5072969667399 902.50618993586 65.241 2 -0.39356573899528724 0.10447295963426671 0.9438714419765777 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'ENST00000583545.1_1_17:61432467-61466989:+|nuORF'] 82511 18777 PVEVQEVSL True PC9_epitope_Rep3 998.5284263341398 998.5273299358599 77.445 2 -0.3936378202014595 0.10452129041195518 0.9438714419765777 ['nc|ENSG00000141425|Q96P16-3|RPRD1A', 'ENSG00000141425|ENST00000399022|RPRD1A'] 4636 13191 ALASHLIEA True PC9_epitope_Rep3 923.5076313199099 923.50652993586 55.775 2 -0.39364007498383236 0.10452129041195518 0.9438714419765777 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2', 'ENST00000540884.1_1_19:48232905-48244686:+|nuORF'] 107019 18741 SYLNPVRTFP True PC9_epitope_Rep6 1192.62405805448 1192.62296993586 84.727 2 -0.3937384331842806 0.10455411255411255 0.9438714419765777 ['ENSG00000074771|ENST00000159060|NOX3', 'NOX3|p.Q345Rfs*49|2|0.27|ENSG00000074771|chr6:155428906-155428906|G/-|frameshift_variant'] 100532 18419 SLPSWSCSLSI True PC9_epitope_Rep2 1178.56416021986 1178.56306993586 76.179 2 -0.39383601457823475 0.10458331168943605 0.9438714419765777 ['ENST00000320623.9_1_16:69752155-69760649:-|nuORF'] 71037 4306 MESRPPPPP True H1975_Epitope_Rep2 1006.4906013567798 1006.48950993586 21.674 2 -0.39385237144863583 0.10458331168943605 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 99155 10222 SLAPSSLTL True NCI_RA007_Epitope_Rep4 887.49639792987 887.49530993586 46.174 2 -0.39385318025117716 0.10458331168943605 0.9438714419765777 ['ENST00000534125.1_1_11:117712504-117713491:-|nuORF'] 46726 8101 IVAKSKEEASK True H1975_Epitope_Rep1 1188.6714021697196 1188.6703099358601 36.106 2 -0.3939328381366636 0.10459700458834732 0.9438714419765777 ['GART|p.C168S|1|0.07|ENSG00000159131|chr21:33532371-33532371|A/T|missense_variant'] 20577 12188 EQEFLTEAL True H1975_Epitope_Rep2 1078.51825557326 1078.51714993586 51.963 2 -0.39396464990904223 0.10459700458834732 0.9438714419765777 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B', 'ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2', 'ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 71047 4633 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 22.943 2 -0.3940385473758697 0.10461533134824458 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 45467 11474 ISEIISSSRRS True NCI_RA007_Epitope_Rep1 1233.6677137716101 1233.6666099358602 48.596 2 -0.3940472561339175 0.10461533134824458 0.9438714419765777 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'ENST00000498803.5_1_18:12449639-12452543:-|nuORF'] 105208 9643 STPVTSAVS True PC9_epitope_Rep1 847.42871229287 847.42760993586 41.947 2 -0.39405469904183005 0.10461533134824458 0.9438714419765777 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 14571 13553 DVFHAYLSL True PC9_epitope_Rep1 1063.53384606775 1063.53274993586 56.986 2 -0.394057186180671 0.10461533134824458 0.9438714419765777 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1', 'CAND1|p.L505Qfs*32|1|0.65|ENSG00000111530|chr12:67305182-67305186|TCTGT/-|frameshift_variant', 'nc|ENSG00000111530|Q86VP6-3|CAND1'] 13492 6618 DPEGTGVLK True NCI_RA007_Epitope_Rep1 914.4709114580198 914.46980993586 29.755 2 -0.39410841512846073 0.10461533134824458 0.9438714419765777 ['MYL2|p.K111T|1|0.32|ENSG00000111245|chr12:110913267-110913267|T/G|missense_variant'] 80418 9261 PLKEEEYRKLR True H1975_Epitope_Rep1 1459.8147123584697 1459.81360993586 40.534 2 -0.39413292058401966 0.10461533134824458 0.9438714419765777 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 30499 15215 GAGVLTYI True NCI_RA007_Epitope_Rep2 792.43815477776 792.43760496793 63.876 1 -0.39413814460128227 0.10461533134824458 0.9438714419765777 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 66529 17048 LSSFSHEEV True PC9_epitope_Rep1 1033.4716397340098 1033.4705499358602 70.401 2 -0.39415650972554134 0.10461533134824458 0.9438714419765777 ['ENSG00000092148|ENST00000399332|HECTD1', 'ENST00000557695.1_1_14:31572066-31574703:-|nuORF', 'HEATR5A-HECTD1|1|fusion'] 71089 6586 METAAAVAA True NCI_RA007_Epitope_Rep4 833.3953039896098 833.39475496793 31.959 1 -0.3941661245489532 0.10461533134824458 0.9438714419765777 ['ENST00000290277.10_1_X:47420617-47420644:+|nuORF'] 26445 18803 FIMLIFLGL True PC9_epitope_Rep1 1065.62966102889 1065.62856993586 77.114 2 -0.3942017177815985 0.10463365239817908 0.9438714419765777 ['SLC6A12|p.P564Sfs*13|1|0.14|ENSG00000111181|chr12:192490-192491|-/C|frameshift_variant', 'ENSG00000111181|ENST00000684302|SLC6A12'] 127862 20098 VRNRSSASMAK True NCI_RA007_Epitope_Rep2 1205.62988879425 1205.6287899358601 83.18 2 -0.3942036247273119 0.10463365239817908 0.9438714419765777 ['ENSG00000169488|ENST00000305051|OR4K15'] 140308 13963 YYDPKHVIF True PC9_epitope_Rep4 1180.59169529704 1180.5900449037902 61.61 3 -0.3942079722779137 0.10463365239817908 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 95732 3509 SCCCCCCC True PC9_epitope_Rep6 826.10688658094 826.10578993586 19.702 2 -0.3942157618890884 0.10463365239817908 0.9438714419765777 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 111349 5989 TLIHHNEAVL True NCI_RA007_Epitope_Rep4 1145.61930702721 1145.61820993586 29.655 2 -0.39421905670927054 0.10463365239817908 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 28020 13797 FQYRRIQYMTK True NCI_RA007_Epitope_Rep1 1532.7922030920797 1532.79110993586 57.684 2 -0.39422350050970345 0.10463365239817908 0.9438714419765777 ['ENST00000548860.5_1_12:49210766-49210967:+|nuORF'] 46985 20641 IVPEGGILQI True PC9_epitope_Rep4 1037.6120963884498 1037.61098993586 87.552 2 -0.3942377145332989 0.10463365239817908 0.9438714419765777 ['ENSG00000163661|ENST00000295927|PTX3'] 131354 8755 VVSAIQVYMLK True NCI_RA007_Epitope_Rep2 1249.71043053073 1249.70932993586 38.7 2 -0.39426095641238296 0.10463365239817908 0.9438714419765777 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 68617 10172 LVAAAVAA True H1975_Epitope_Rep3 684.41702541036 684.4164749679301 44.171 1 -0.3942723949148045 0.10463365239817908 0.9438714419765777 ['ENST00000465529.1_1_22:35695897-35713955:+|nuORF', 'ENST00000487670.1_1_22:35695897-35718132:+|nuORF'] 10039 12671 AYVEKFSYKS True NCI_RA007_Epitope_Rep2 1220.607739284 1220.60664993586 53.902 2 -0.39432269136199477 0.10464915013673971 0.9438714419765777 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 90630 24887 RKKKRCRL True NCI_RA007_Epitope_Rep1 1086.6920355583397 1086.6909299358601 103.01 2 -0.39433224310276105 0.1046610242830192 0.9438714419765777 ['ENST00000494268.1_1_X:11778342-11782058:+|nuORF', 'ENST00000478462.5_1_X:11777869-11779061:+|nuORF', 'MSL3|p.L292Qfs*23|1|0.37|ENSG00000005302|chrX:11763904-11763907|CTTC/-|frameshift_variant', 'nc|ENSG00000005302|Q8N5Y2-5|MSL3', 'nc|ENSG00000005302|Q8N5Y2-2|MSL3', 'nc|ENSG00000005302|Q8N5Y2-3|MSL3', 'ENSG00000005302|ENST00000312196|MSL3'] 72587 15469 MVQGCCLL True PC9_epitope_Rep1 865.3860022592099 865.38490993586 64.322 2 -0.39434487194550766 0.1046610242830192 0.9438714419765777 ['ENST00000370620.5_1_X:135748320-135748473:-|nuORF'] 1535 9807 AEERVSATLA True PC9_epitope_Rep2 1045.54038800017 1045.53928993586 43.06 2 -0.3943472136260085 0.1046610242830192 0.9438714419765777 ['ENST00000485802.1_1_22:20094124-20096613:+|nuORF'] 87313 17187 QSVSQFLLS True PC9_epitope_Rep2 1007.52876068731 1007.52766993586 71.368 2 -0.39443564508661255 0.10467108565099253 0.9438714419765777 ['nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3'] 58148 12530 LESFGYTI True PC9_epitope_Rep1 928.45419876472 928.45310993586 53.068 2 -0.394446014761808 0.10467108565099253 0.9438714419765777 ['GLRA3|p.M196I|1|0.2|ENSG00000145451|chr4:174682926-174682926|C/G|missense_variant'] 71043 4250 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 21.464 2 -0.3944517762878771 0.10467108565099253 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 79187 21236 PGELLIAL True PC9_epitope_Rep1 824.5007550343199 824.49964993586 86.508 2 -0.39447136385183484 0.10467108565099253 0.9438714419765777 ['ENSG00000125755|ENST00000245934|SYMPK', 'ENST00000598155.5_1_19:46318820-46327397:-|nuORF'] 24793 11324 FCFCCFWYCK True NCI_RA007_Epitope_Rep4 1348.4901500579197 1348.48904993586 50.455 2 -0.39458507871584925 0.10468114562602751 0.9438714419765777 ['ENST00000555736.1_1_14:65714419-65769374:-|nuORF'] 101201 11855 SLVWGAEAVQA True PC9_epitope_Rep1 1129.5767735088898 1129.57566993586 50.465 2 -0.3946124924601911 0.10468114562602751 0.9438714419765777 ['ENSG00000170892|ENST00000396388|TSEN34', 'ENST00000496583.1_1_19:54695101-54695536:+|nuORF'] 124538 14943 VLGCNNFRVI True PC9_epitope_Rep5 1133.60154878809 1133.59990490379 62.482 3 -0.3946130968821015 0.10468114562602751 0.9438714419765777 ['ENSG00000116984|ENST00000366577|MTR', 'nc|ENSG00000116984|Q99707-2|MTR'] 45478 14461 ISELSGKVL True PC9_epitope_Rep5 944.5542471591599 944.55314993586 60.624 2 -0.3946435080787864 0.10468114562602751 0.9438714419765777 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-3|MTCL1', 'nc|ENSG00000168502|Q9Y4B5|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-2|MTCL1'] 119681 7133 VESTVNSVI True PC9_epitope_Rep3 946.4971262058599 946.49602993586 32.445 2 -0.3947118500459401 0.10471394455404423 0.9438714419765777 ['ENSG00000197416|ENST00000692030|FABP12'] 15072 8043 EAAVAAVAV True NCI_RA007_Epitope_Rep5 799.44396843419 799.44286993586 37.627 2 -0.3947589315255241 0.10474674234689463 0.9438714419765777 ['ENSG00000066735|ENST00000423312|KIF26A', 'KIF26A|p.P954Hfs*31|1|0.2|ENSG00000066735|chr14:104175645-104175645|C/-|frameshift_variant'] 109450 11767 TGSRPVVL True PC9_epitope_Rep1 827.4865019525099 827.48540993586 50.134 2 -0.39493483926290346 0.10479321681951895 0.9438714419765777 ['ENSG00000173239|ENST00000404743|LIPM', 'nc|ENSG00000173239|Q5VYY2-2|LIPM'] 120883 8478 VGDVFRGG True PC9_epitope_Rep6 805.4082516318099 805.40714993586 42.322 2 -0.39494697166770876 0.10479321681951895 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 14703 21370 DVQMLLRFG True PC9_epitope_Rep3 1077.5641006502099 1077.56300993586 87.498 2 -0.39496582415646825 0.10479321681951895 0.9438714419765777 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 43681 5232 IINGKVGG True PC9_epitope_Rep5 756.4493881677998 756.44828993586 25.14 2 -0.3951687879585246 0.10484331470298143 0.9438714419765777 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 87895 11957 QVLYLSPFYRR True NCI_RA007_Epitope_Rep2 1440.7877693346397 1440.7866699358601 51.112 2 -0.395237930779252 0.10485880398671096 0.9438714419765777 ['ENST00000466978.1_1_15:74640533-74658298:-|nuORF'] 96584 6509 SELSDQFAP True H1975_Epitope_Rep3 992.4450906329998 992.44398993586 30.006 2 -0.3953658298147295 0.10494350526880418 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant'] 123702 13472 VIPISHFIP True H1975_Epitope_Rep2 1021.59605240149 1021.59494993586 56.954 2 -0.3953884856466005 0.10495899228293594 0.9438714419765777 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 124360 17710 VLDSVDVRL True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 72.917 2 -0.39545226495505154 0.10498633170697948 0.9438714419765777 ['ENSG00000169105|ENST00000306243|CHST14'] 68115 11213 LTPEQLEAV True H1975_Epitope_Rep1 998.5284263341399 998.5273299358599 48.102 2 -0.3954625075301815 0.10498633170697948 0.9438714419765777 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000534191.1_1_11:828562-829184:+|nuORF', 'ENST00000530737.2_1_11:828562-829423:+|nuORF'] 136851 17185 YIVSCKQTEVP True PC9_epitope_Rep3 1265.63257413285 1265.63092490379 71.259 3 -0.39549697938237227 0.10498633170697948 0.9438714419765777 ['ENSG00000162390|ENST00000343744|ACOT11', 'nc|ENSG00000162390|Q8WXI4|ACOT11'] 93068 2674 RRRKRKKRK True NCI_RA007_Epitope_Rep2 1310.8959718576996 1310.89432490379 14.619 3 -0.39550838970463736 0.10498633170697948 0.9438714419765777 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 21184 7026 ERERERELRDV True NCI_RA007_Epitope_Rep1 1485.7648020439299 1485.76315490379 31.327 3 -0.39553626555856825 0.10501730103806228 0.9438714419765777 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3'] 112117 13934 TLTTNDIVISK True NCI_RA007_Epitope_Rep2 1203.6710678165498 1203.66996993586 58.855 2 -0.39553788387344985 0.10501730103806228 0.9438714419765777 ['ENSG00000113141|ENST00000417647|IK'] 24785 16829 FAYGYIEDL True H1975_Epitope_Rep3 1089.50187723313 1089.50137496793 70.285 1 -0.3955680289049694 0.10503278489991523 0.9438714419765777 ['ENSG00000021355|ENST00000380739|SERPINB1', 'nc|ENSG00000021355|P30740-2|SERPINB1'] 71046 4537 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 22.573 2 -0.39564723030654836 0.10508105115651437 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 94383 16278 RYETWRRRRFR True NCI_RA007_Epitope_Rep2 1680.9185577770797 1680.91746993586 68.047 2 -0.39564839609996083 0.10508105115651437 0.9438714419765777 ['ERICH3|p.S250Y|1|0.11|ENSG00000178965|chr1:74631783-74631783|G/T|missense_variant'] 117583 17767 VAGPDSPLLP True PC9_epitope_Rep1 964.5229470308799 964.52184993586 73.138 2 -0.3956674562953312 0.10509471499005277 0.9438714419765777 ['ENST00000508789.5_2_3:126676279-126676333:+|nuORF'] 28241 4255 FRSRMWKWRPR True NCI_RA007_Epitope_Rep5 1604.8622887709198 1604.86009987172 22.933 4 -0.3956984817976062 0.10509471499005277 0.9438714419765777 ['ENST00000359013.4_1_3:30648217-30664756:+|nuORF'] 105975 8799 SVLGTLLQK True NCI_RA007_Epitope_Rep3 957.58588164061 957.58478993586 41.699 2 -0.3957859141302923 0.10510837787811164 0.9438714419765777 ['ENSG00000130829|ENST00000342782|DUSP9'] 115146 5078 TVADKIHSV True PC9_epitope_Rep4 968.52909504048 968.52798993586 26.183 2 -0.3958413017509561 0.10510837787811164 0.9438714419765777 ['ENSG00000276023|ENST00000617516|DUSP14'] 133071 5364 VYYNEATGGK True PC9_epitope_Rep6 1100.5138388991597 1100.51274993586 28.496 2 -0.39592201104022756 0.10513933816533758 0.9438714419765777 ['ENSG00000188229|ENST00000340384|TUBB4B', 'TUBB4B|p.R391Pfs*25|1|0.27|ENSG00000188229|chr9:137243390-137243390|G/-|frameshift_variant', 'ENST00000604929.1_1_9:140135770-140136775:+|nuORF', 'ENSG00000196230|ENST00000327892|TUBB'] 27498 18784 FPEHRRQMYIQ True H1975_Epitope_Rep1 1503.74050187239 1503.73940993586 78.328 2 -0.39594267955592366 0.10513933816533758 0.9438714419765777 ['ENST00000526620.5_1_11:118081332-118083197:-|nuORF'] 86409 20301 QQPILPIAY True PC9_epitope_Rep4 1041.5858816406098 1041.58478993586 86.23 2 -0.395958552287224 0.10515299856428707 0.9438714419765777 ['ENSG00000169330|ENST00000305428|MINAR1', 'MINAR1|p.G743Afs*7|1|0.14|ENSG00000169330|chr15:79458373-79458373|G/-|frameshift_variant'] 99521 7445 SLESYQNLNP True NCI_RA007_Epitope_Rep2 1163.54586730343 1163.5447699358601 33.585 2 -0.39596562357760745 0.10515299856428707 0.9438714419765777 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'SENP7|p.C683Ffs*13|1|0.29|ENSG00000138468|chr3:101343744-101343744|C/-|frameshift_variant', 'SENP7|p.H218Y|1|0.14|ENSG00000138468|chr3:101398886-101398886|G/A|missense_variant'] 117512 11206 VAEYTFRQFR True H1975_Epitope_Rep1 1315.66731984879 1315.6662299358602 48.074 2 -0.39602586242157445 0.10518577457967204 0.9438714419765777 ['nc|ENSG00000102032|P51606-3|RENBP', 'ENSG00000102032|ENST00000393700|RENBP'] 99567 9791 SLFFHHIP True PC9_epitope_Rep1 996.5181364339601 996.51702993586 42.523 2 -0.39616436496277585 0.10519943266336873 0.9438714419765777 ['ENSG00000117479|ENST00000236137|SLC19A2'] 60157 5765 LHYHVSCAI True H1975_Epitope_Rep3 1041.50658577409 1041.5054899358602 27.202 2 -0.3961658697187323 0.10519943266336873 0.9438714419765777 ['ENST00000272645.8_1_2:128604394-128604487:-|nuORF'] 10462 9786 CMSLHGGIDQY True H1975_Epitope_Rep1 1222.51107910118 1222.5099899358602 42.572 2 -0.39622268769432234 0.10523220617486811 0.9438714419765777 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000503946.1_1_5:134125872-134147057:+|nuORF'] 46021 8506 ISVHCNLRLP True PC9_epitope_Rep1 1150.6280978891 1150.62646490379 37.554 3 -0.39625436955027715 0.10524768230247682 0.9438714419765777 ['ENST00000379477.5_1_13:41835935-41837507:-|nuORF'] 47289 15509 IYFKKPLNI True PC9_epitope_Rep5 1134.68011637862 1134.67846490379 64.665 3 -0.39634816323816635 0.1052768121205832 0.9438714419765777 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1'] 55418 5462 LATFWYYAK True NCI_RA007_Epitope_Rep1 1161.5858816406098 1161.58478993586 25.317 2 -0.39635851134826394 0.1052768121205832 0.9438714419765777 ['ENST00000534385.1_1_11:118272380-118277824:+|nuORF', 'ENSG00000167283|ENST00000300688|ATP5MG', 'ENST00000527186.1_1_11:118277587-118279810:+|nuORF'] 19104 12103 ELHYTGEAL True PC9_epitope_Rep2 1031.4923751785898 1031.4912699358601 51.864 2 -0.3963650349848202 0.1052768121205832 0.9438714419765777 ['nc|ENSG00000174501|Q5JPF3|ANKRD36C', 'ENSG00000174501|ENST00000295246|ANKRD36C', 'nc|ENSG00000135976|A6QL64-3|ANKRD36', 'ENST00000421946.2_1_2:97879127-97913404:+|nuORF', 'nc|ENSG00000174501|Q5JPF3-2|ANKRD36C', 'ENSG00000135976|ENST00000420699|ANKRD36', 'ENST00000494336.1_1_2:97911343-97914952:+|nuORF', 'ENST00000488721.5_1_2:96519417-96521901:-|nuORF', 'nc|ENSG00000196912|Q8N2N9-3|ANKRD36B', 'nc|ENSG00000196912|Q8N2N9-2|ANKRD36B', 'ENSG00000196912|ENST00000359901|ANKRD36B'] 111350 5261 TLIHHNEAVL True NCI_RA007_Epitope_Rep5 1145.61930702721 1145.61820993586 26.932 2 -0.39638360785123183 0.10528682358231153 0.9438714419765777 ['nc|ENSG00000072803|Q9UKB1-2|FBXW11', 'nc|ENSG00000072803|Q9UKB1-3|FBXW11', 'nc|ENSG00000072803|Q9UKB1|FBXW11', 'ENSG00000072803|ENST00000517395|FBXW11'] 66997 17048 LTAFLNGVTV True PC9_epitope_Rep1 1033.5807962601698 1033.5796899358602 70.401 2 -0.3964213546395367 0.10528682358231153 0.9438714419765777 ['ENSG00000169006|ENST00000306928|NTSR2'] 123052 8818 VGYRVATF True NCI_RA007_Epitope_Rep3 911.4865019525099 911.48540993586 41.778 2 -0.3964545349067002 0.10528682358231153 0.9438714419765777 ['ENSG00000179085|ENST00000368400|DPM3', 'nc|ENSG00000179085|Q9P2X0-2|DPM3'] 91847 7447 RPNDSRMLVA True PC9_epitope_Rep5 1157.59752603681 1157.59588490379 33.599 3 -0.3964581635532881 0.10528682358231153 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 78871 5034 PESTTPVKA True H1975_Epitope_Rep3 928.48656152216 928.48546993586 24.484 2 -0.39660244355811425 0.10530047557284912 0.9438714419765777 ['nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2', 'nc|ENSG00000138162|O95359-5|TACC2', 'nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 81155 6299 PPLATTSV True H1975_Epitope_Rep3 784.4330693973201 784.43196993586 29.234 2 -0.39660711865419807 0.10530047557284912 0.9438714419765777 ['ENSG00000139629|ENST00000356317|GALNT6'] 44687 18451 IPNIAPDI True PC9_epitope_Rep4 851.47526856247 851.47416993586 79.042 2 -0.39668978587021675 0.10535053436170581 0.9438714419765777 ['ZNF292-ORC3|2|fusion', 'ZNF292-ORC3|1|fusion', 'nc|ENSG00000135336|Q9UBD5-3|ORC3', 'ENSG00000135336|ENST00000392844|ORC3', 'nc|ENSG00000135336|Q9UBD5-2|ORC3'] 86468 6125 QQSVIVDGP True H1975_Epitope_Rep2 941.4818104948898 941.4812649679301 28.54 1 -0.3967117756145941 0.10538147610154251 0.9438714419765777 ['ENSG00000108950|ENST00000592554|FAM20A', 'ENST00000226094.9_1_17:66533620-66538255:-|nuORF'] 100786 9360 SLRRHQLSHRP True NCI_RA007_Epitope_Rep2 1385.77524758833 1385.7741499358601 41.018 2 -0.39672667320564886 0.10538147610154251 0.9438714419765777 ['ENSG00000175213|ENST00000311764|ZNF408'] 107694 2757 TALHSLEQTSP True H1975_Epitope_Rep2 1182.5880664685799 1182.58642490379 14.633 3 -0.3967621182491054 0.10539694616887721 0.9438714419765777 ['nc|ENSG00000135100|P20823-6|HNF1A', 'nc|ENSG00000135100|P20823-3|HNF1A', 'nc|ENSG00000135100|P20823-2|HNF1A', 'nc|ENSG00000135100|P20823|HNF1A', 'ENSG00000135100|ENST00000257555|HNF1A', 'nc|ENSG00000135100|P20823-7|HNF1A'] 56232 7928 LDPSRESIP True H1975_Epitope_Rep2 1012.5189242795999 1012.51782993586 35.44 2 -0.39682984768929896 0.10541241570119315 0.9438714419765777 ['nc|ENSG00000291104|Q96KV6|BTN2A3P'] 17633 8370 EHNSKLTI True PC9_epitope_Rep6 940.4977949122 940.49668993586 41.853 2 -0.3968873141410662 0.10541877031606611 0.9438714419765777 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF'] 70701 9099 MDPFNHRIF True NCI_RA007_Epitope_Rep3 1175.5545985956699 1175.5535099358601 42.876 2 -0.3968877111968406 0.10541877031606611 0.9438714419765777 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 126964 16001 VPVRYRREHLS True PC9_epitope_Rep1 1410.7844152897 1410.7833099358602 66.359 2 -0.3968907252249438 0.10541877031606611 0.9438714419765777 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1'] 78314 8269 PASPALTAA True PC9_epitope_Rep1 797.42831837005 797.4272299358599 36.64 2 -0.39689316255566354 0.10541877031606611 0.9438714419765777 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 131733 18447 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 77.78 2 -0.3969103130293946 0.10541877031606611 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 1980 15000 AEKEAMCLSAP True H1975_Epitope_Rep2 1148.5205811557198 1148.51948993586 62.849 2 -0.3969130490663737 0.10541877031606611 0.9438714419765777 ['ENST00000509549.5_1_22:19341546-19435194:-|nuORF', 'ENSG00000100084|ENST00000263208|HIRA'] 118427 5869 VDPGHPPAS True NCI_RA007_Epitope_Rep3 875.41373093507 875.41262993586 30.064 2 -0.39698255869533583 0.10546881753894566 0.9438714419765777 ['ENST00000487659.1_1_1:1342042-1342597:-|nuORF'] 62459 16734 LLSLGRRTL True PC9_epitope_Rep3 1027.65021323267 1027.64910993586 69.506 2 -0.3970453544774294 0.1055015733600747 0.9438714419765777 ['ENST00000425075.6_1_5:137289987-137295325:-|nuORF'] 61900 11152 LLLKREVP True H1975_Epitope_Rep3 966.6226015025 966.62150993586 47.991 2 -0.3970818363711672 0.10551521438450899 0.9438714419765777 ['nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENSG00000101745|ENST00000262126|ANKRD12', 'ANKRD12|p.I828Rfs*5|1|0.2|ENSG00000101745|chr18:9255747-9255751|AAATT/-|frameshift_variant', 'ENST00000540578.6_1_18:9182415-9235682:+|nuORF'] 133115 4313 WAWRCFRRAQR True NCI_RA007_Epitope_Rep4 1534.78403845022 1534.78185987172 22.933 4 -0.3970981235298969 0.10551521438450899 0.9438714419765777 ['ENST00000442820.5_1_1:163291810-163292704:+|nuORF', 'ENST00000524800.5_1_1:163291810-163295872:+|nuORF'] 56538 7278 LDVEPNC[Carbamidomethyl]RREG True H1975_Epitope_Rep3 1343.62519761606 1343.6241099358601 32.969 2 -0.3971183669107395 0.10553067893017064 0.9438714419765777 ['ENST00000503671.2_1_4:110736986-110737082:+|nuORF'] 28694 10576 FSTNYQSL True PC9_epitope_Rep5 958.43961132974 958.43850993586 45.669 2 -0.3971950929495342 0.10554614294111546 0.9438714419765777 ['ENST00000555540.1_1_14:35981656-35982271:-|nuORF'] 89934 23465 RFVKWPRYIRL True PC9_epitope_Rep2 1532.9092218799997 1532.9081299358602 95.729 2 -0.3972277517079871 0.10557889459398717 0.9438714419765777 ['ENSG00000148303|ENST00000323345|RPL7A', 'ENST00000463740.5_1_9:136215098-136217195:+|nuORF'] 101644 20471 SPFLGVGL True PC9_epitope_Rep2 788.4432401582 788.44214993586 84.171 2 -0.39729208928937404 0.10562893299218588 0.9438714419765777 ['ENST00000583277.1_1_17:7467715-7468388:+|nuORF'] 67868 15098 LTKEYDRLLEE True H1975_Epitope_Rep1 1407.7245599413898 1407.72346993586 63.329 2 -0.39732034183469644 0.10564439450254992 0.9438714419765777 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 21917 13686 ESGETWLEYLY True H1975_Epitope_Rep2 1388.61361251008 1388.61250993586 57.785 2 -0.3973927013166896 0.10565985547833903 0.9438714419765777 ['DNASE2B|p.G60W|1|0.29|ENSG00000137976|chr1:84401953-84401953|G/T|missense_variant'] 64227 7284 LQKEINSLSGK True NCI_RA007_Epitope_Rep2 1215.68230120659 1215.6812099358601 32.953 2 -0.39744090577778673 0.10569260290075544 0.9438714419765777 ['ENSG00000101997|ENST00000376227|CCDC22'] 75205 12132 NPAVLSTAS True PC9_epitope_Rep1 858.44469671018 858.44358993586 51.528 2 -0.39749031427215575 0.1057389801210026 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 126263 11279 VPHLLTEA True PC9_epitope_Rep1 878.48616759934 878.48506993586 48.264 2 -0.3975233488809004 0.1057389801210026 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 116152 15503 TVTEITLI True PC9_epitope_Rep1 888.5167990212799 888.51570993586 64.455 2 -0.39753140524543273 0.1057389801210026 0.9438714419765777 ['OR6M1|p.D119*|1|0.27|ENSG00000196099|chr11:123805995-123805996|-/A|frameshift_variant', 'OR6M1|p.C238Lfs*31|1|0.17|ENSG00000196099|chr11:123805637-123805638|-/A|frameshift_variant', 'ENSG00000196099|ENST00000309154|OR6M1'] 69975 9739 LYEQGGRLK True NCI_RA007_Epitope_Rep1 1062.5821932425 1062.58108993586 41.884 2 -0.3975731346281164 0.1057890096973259 0.9438714419765777 ['nc|ENSG00000118900|Q9NPG3-2|UBN1', 'ENSG00000118900|ENST00000262376|UBN1'] 14499 8195 DTWESLQK True PC9_epitope_Rep2 1005.47672511445 1005.47562993586 36.88 2 -0.3976553145212102 0.10580263771973795 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 85242 5691 QKKLKKKKKKK True NCI_RA007_Epitope_Rep5 1412.0078732921095 1412.0067699358601 28.578 2 -0.39767950003065944 0.10580263771973795 0.9438714419765777 ['ENST00000378026.4_3_12:106631761-106631812:-|nuORF'] 26590 10505 FKDLGEENFK True PC9_epitope_Rep5 1225.5979028762897 1225.5962549037902 45.394 3 -0.39772437245308295 0.10581809382238047 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 134299 21093 WRTRSLLKRKT True NCI_RA007_Epitope_Rep2 1443.8786500277097 1443.87700490379 87.253 3 -0.39773289974491083 0.10583354939071818 0.9438714419765777 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 94254 6581 RWRRQQERRQQ True PC9_epitope_Rep4 1625.87233586065 1625.8706849037903 32.469 3 -0.3978551845387797 0.10587991289017941 0.9438714419765777 ['RASIP1|p.R336W|1|0.24|ENSG00000105538|chr19:48735369-48735369|G/A|missense_variant'] 123319 5897 VHTGDELL True NCI_RA007_Epitope_Rep3 882.44469671018 882.44358993586 30.171 2 -0.3978826622026649 0.10587991289017941 0.9438714419765777 ['nc|ENSG00000102893|Q93100-4|PHKB', 'nc|ENSG00000102893|Q93100-2|PHKB', 'nc|ENSG00000102893|Q93100-3|PHKB', 'ENSG00000102893|ENST00000323584|PHKB'] 110634 15555 TITWRKNGKL True PC9_epitope_Rep1 1215.7087907379498 1215.70714490379 64.655 3 -0.39790681662606125 0.10587991289017941 0.9438714419765777 ['ENST00000498020.1_1_6:32904922-32905177:-|nuORF', 'ENSG00000242574|ENST00000418107|HLA-DMB'] 101231 9672 SLWCSVTSV True PC9_epitope_Rep2 980.4637179026 980.46262993586 42.541 2 -0.3979843186382142 0.10591264971741647 0.9438714419765777 ['ENSG00000169393|ENST00000339841|ELSPBP1'] 81271 8504 PPPPQPPPP True PC9_epitope_Rep3 922.4912529797798 922.49014993586 37.671 2 -0.39801865560407806 0.10592810231593501 0.9438714419765777 ['nc|ENSG00000106078|O75128-5|COBL', 'nc|ENSG00000106078|O75128-4|COBL', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant', 'ENSG00000203867|ENST00000369519|RBM20', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341', 'ENSG00000090470|ENST00000204549|PDCD7', 'nc|ENSG00000106078|O75128-3|COBL', 'ENSG00000106078|ENST00000265136|COBL', 'nc|ENSG00000106078|O75128-7|COBL', 'nc|ENSG00000106078|O75128-2|COBL'] 45779 6916 ISNKTVAV True PC9_epitope_Rep2 830.4861675993399 830.48506993586 32.004 2 -0.3980775959185687 0.10595717470577053 0.9438714419765777 ['NUP210L|p.Q1121K|1|0.36|ENSG00000143552|chr1:154054350-154054350|G/T|missense_variant'] 64948 11848 LSCLGCKI True PC9_epitope_Rep2 835.42958132335 835.42848993586 50.902 2 -0.39813768843632946 0.10595717470577053 0.9438714419765777 ['nc|ENSG00000080166|P40126-2|DCT', 'ENSG00000080166|ENST00000377028|DCT', 'ENST00000472871.1_1_13:95120883-95131509:-|nuORF'] 22905 14836 EVFENYFP True PC9_epitope_Rep1 1043.46001242115 1043.4589099358602 61.885 2 -0.39815890095392414 0.10595717470577053 0.9438714419765777 ['nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT', 'ENST00000519705.1_1_8:43052051-43054709:+|nuORF'] 11401 16680 DFKDLWTKLKE True NCI_RA007_Epitope_Rep1 1421.75546614685 1421.75436993586 69.001 2 -0.3981840836930138 0.10596530033870187 0.9438714419765777 ['nc|ENSG00000101773|Q99708-2|RBBP8', 'ENSG00000101773|ENST00000327155|RBBP8', 'nc|ENSG00000101773|Q99708-3|RBBP8'] 117987 18341 VASGEKKNSV True PC9_epitope_Rep5 1017.5454733806099 1017.54436993586 75.563 2 -0.3982003169038202 0.10596530033870187 0.9438714419765777 ['ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000397492.1_1_22:32346295-32352776:+|nuORF'] 82001 11575 PSSQSIWFLKT True H1975_Epitope_Rep3 1292.67648755016 1292.67538993586 49.653 2 -0.39824768288417706 0.10596530033870187 0.9438714419765777 ['ERV3-1|p.A413Hfs*36|1|0.21|ENSG00000213462|chr7:64991790-64991790|C/-|frameshift_variant', 'ENSG00000213462|ENST00000394323|ERV3-1'] 79740 6075 PHSPGLAAP True PC9_epitope_Rep2 845.43955176009 845.43844993586 28.761 2 -0.39825574154710625 0.10596530033870187 0.9438714419765777 ['nc|ENSG00000158859|O75173-2|ADAMTS4'] 70772 8164 MEEELQREGS True H1975_Epitope_Rep1 1206.5186665794197 1206.5175699358601 36.344 2 -0.3983109710223955 0.10596530033870187 0.9438714419765777 ['ENST00000589222.5_2_17:59457929-59469483:+|nuORF'] 102198 11557 SPSLSPLAA True H1975_Epitope_Rep2 841.4545331178899 841.45342993586 49.515 2 -0.3983501846008662 0.1059807496241511 0.9438714419765777 ['ENSG00000166341|ENST00000299441|DCHS1'] 30490 4537 GAGQSVADLNP True H1975_Epitope_Rep2 1027.4934378077498 1027.4923499358601 22.561 2 -0.39848158123964755 0.10602709427702516 0.9438714419765777 ['ENST00000433126.1_1_20:61294700-61296403:-|nuORF'] 100597 7360 SLQHPNVL True PC9_epitope_Rep2 906.49231560894 906.49120993586 33.692 2 -0.3984820234795638 0.10602709427702516 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3'] 107240 8594 SYPRRFSTL True PC9_epitope_Rep2 1125.59309227937 1125.59198993586 38.418 2 -0.39849039917071777 0.10602709427702516 0.9438714419765777 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 4834 8092 ALEYNFPKRIC True H1975_Epitope_Rep1 1352.6910920684797 1352.68998993586 36.071 2 -0.39859171082995487 0.10605432303545512 0.9438714419765777 ['ENST00000510346.5_1_5:110836746-110848166:-|nuORF'] 83866 7654 QEHLSVYAV True PC9_epitope_Rep5 1044.5240096600398 1044.52290993586 34.387 2 -0.3985932101181922 0.10605432303545512 0.9438714419765777 ['NTRK2|p.R428Q|1|0.48|ENSG00000148053|chr9:84745060-84745060|G/A|missense_variant'] 11852 4146 DHNDGLGNAF True NCI_RA007_Epitope_Rep3 1058.44173658806 1058.4406299358602 22.89 2 -0.3985976634876291 0.10605432303545512 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 93873 8936 RVFVVGVGMTK True NCI_RA007_Epitope_Rep4 1191.67979910879 1191.67816490379 41.206 3 -0.3986063626434181 0.10605432303545512 0.9438714419765777 ['nc|ENSG00000116171|P22307-7|SCP2', 'nc|ENSG00000116171|P22307-8|SCP2', 'ENSG00000116171|ENST00000371514|SCP2', 'ENST00000528311.5_1_1:53392996-53413692:+|nuORF', 'nc|ENSG00000116171|P22307-3|SCP2'] 21940 9033 ESKDVNLD True PC9_epitope_Rep3 918.42944056886 918.4288949679301 39.688 1 -0.3987392056855251 0.10606976864730376 0.9438714419765777 ['ENST00000487890.5_1_7:23286476-23290466:+|nuORF', 'ENST00000492512.1_1_7:23290343-23290466:+|nuORF'] 65894 9434 LSLEDRIQ True PC9_epitope_Rep4 972.5240096600398 972.52290993586 43.9 2 -0.3987764419655307 0.10608521372542244 0.9438714419765777 ['ENSG00000151612|ENST00000508784|ZNF827', 'nc|ENSG00000151612|Q17R98-2|ZNF827'] 82180 20982 PTEPLTAEL True PC9_epitope_Rep1 969.5018772331299 969.50078993586 85.534 2 -0.39887558840682347 0.10611243564493279 0.9438714419765777 ['ENST00000441363.1_1_6:74009094-74009619:+|nuORF'] 79159 17736 PGAVIGAVLA True PC9_epitope_Rep6 866.5225531080599 866.52200496793 80.855 1 -0.39892018605252505 0.10611243564493279 0.9438714419765777 ['CD36|p.A11P|2|0.21|ENSG00000135218|chr7:80646771-80646771|G/C|missense_variant'] 137653 11037 YLYKFRHSPNC True NCI_RA007_Epitope_Rep1 1426.6815900139397 1426.6804899358601 46.928 2 -0.3989443505073056 0.10611243564493279 0.9438714419765777 ['ENSG00000113048|ENST00000261413|MRPS27'] 131735 18858 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85398993586 79.383 2 -0.39895413975652716 0.10611243564493279 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 22802 4631 EVDQVDQKQ True H1975_Epitope_Rep3 1087.5145671751498 1087.51346993586 22.936 2 -0.39906675532689856 0.10612787865176304 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN'] 38206 10963 HETGVDDTV True PC9_epitope_Rep5 971.41960416115 971.41850993586 47.158 2 -0.3991617640222157 0.10617237030766839 0.9438714419765777 ['ENSG00000104808|ENST00000221403|DHDH'] 121976 7724 VGPWYHLSALE True H1975_Epitope_Rep1 1270.6346227381798 1270.63352993586 34.672 2 -0.3991635687256388 0.10617237030766839 0.9438714419765777 ['ENGASE|p.Q430L|1|0.23|ENSG00000167280|chr17:79083798-79083798|A/T|missense_variant'] 41935 8317 IEAQELAR True PC9_epitope_Rep1 928.4977949121999 928.49668993586 36.825 2 -0.3992050064096061 0.10617237030766839 0.9438714419765777 ['nc|ENSG00000163681|Q14BN4-5|SLMAP', 'nc|ENSG00000163681|Q14BN4-4|SLMAP', 'nc|ENSG00000163681|Q14BN4-2|SLMAP', 'nc|ENSG00000163681|Q14BN4-3|SLMAP', 'nc|ENSG00000163681|Q14BN4|SLMAP', 'ENSG00000163681|ENST00000671191|SLMAP'] 69419 10193 LVREGEIAM True PC9_epitope_Rep5 1016.5324661687598 1016.53136993586 44.195 2 -0.3992602036856836 0.10617237030766839 0.9438714419765777 ['ENSG00000176390|ENST00000324238|CRLF3', 'nc|ENSG00000176390|Q8IUI8-2|CRLF3'] 77873 10912 PAGPTGVEE True PC9_epitope_Rep1 855.39741216459 855.39630993586 46.859 2 -0.3992757422122633 0.10620508568269763 0.9438714419765777 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-2|TMEM131L', 'MND1-KIAA0922|1|fusion'] 55984 9200 LDIGTEVFAP True H1975_Epitope_Rep3 1060.54407639828 1060.5429699358601 40.38 2 -0.39934323644498876 0.10625140349968043 0.9438714419765777 ['ENSG00000204386|ENST00000375631|NEU1', 'ENST00000480384.1_1_6:31828203-31830565:-|nuORF'] 20388 18502 EPLGPRFWWP True PC9_epitope_Rep3 1283.64512785223 1283.64349490379 76.385 3 -0.39937989717988 0.10625140349968043 0.9438714419765777 ['ENST00000513775.1_1_4:44680541-44682717:+|nuORF'] 36588 20619 GVLGVVTGV True PC9_epitope_Rep1 799.4803539429099 799.47924993586 84.13 2 -0.3993894552448337 0.10625140349968043 0.9438714419765777 ['ENSG00000124217|ENST00000244051|MOCS3'] 72831 10345 NALEEHNF True PC9_epitope_Rep5 972.4301092752 972.42900993586 44.777 2 -0.39942939285155643 0.1062841152490845 0.9438714419765777 ['ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENST00000498638.1_1_7:99753991-99754759:-|nuORF'] 78377 21534 PAVAKNYSV True PC9_epitope_Rep1 947.50763131991 947.50652993586 87.659 2 -0.39959148031282155 0.1063340991138825 0.9438714419765777 ['ENSG00000137509|ENST00000313010|PRCP', 'nc|ENSG00000137509|P42785-2|PRCP'] 11105 8904 DEDLTQVNVN True NCI_RA007_Epitope_Rep5 1145.52004647841 1145.51894993586 40.91 2 -0.3996591897937582 0.1063612967856711 0.9438714419765777 ['PTPRZ1|p.L2100Pfs*15|1|0.25|ENSG00000106278|chr7:122053952-122053953|-/T|frameshift_variant', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'nc|ENSG00000106278|P23471-3|PTPRZ1', 'PTPRZ1|p.N613Tfs*5|1|0.33|ENSG00000106278|chr7:122010881-122010881|A/-|frameshift_variant'] 1842 11963 AEIEDPPIP True NCI_RA007_Epitope_Rep5 979.4862271689899 979.48512993586 52.671 2 -0.3996918741268655 0.1063612967856711 0.9438714419765777 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 40555 10447 HSSMLATLTL True PC9_epitope_Rep3 1072.5586809166 1072.55758993586 45.121 2 -0.3997097861068215 0.1063612967856711 0.9438714419765777 ['ENST00000220597.4_1_8:81881203-81881314:-|nuORF'] 14184 7589 DSSNSM[Oxidation]QTIQK True H1975_Epitope_Rep1 1253.55578074457 1253.55468993586 34.183 2 -0.39974564834362536 0.1063612967856711 0.9438714419765777 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000506277.1_1_5:36886275-36886596:+|nuORF', 'ENST00000447938.1_1_21:21797263-21797497:-|nuORF', 'ENST00000446618.1_1_22:19245879-19246326:+|nuORF'] 54705 9170 LAEGGQFLGDP True H1975_Epitope_Rep1 1102.5294889632999 1102.52838993586 40.177 2 -0.3998456213884918 0.10640759930915371 0.9438714419765777 ['ENSG00000142686|ENST00000270815|C1orf216'] 43922 7709 ILEANMDIVYK True H1975_Epitope_Rep2 1307.6795243252698 1307.67842993586 34.608 2 -0.39987164975212075 0.10640759930915371 0.9438714419765777 ['ENSG00000050393|ENST00000379170|MCUR1'] 122472 17482 VGSPPVFIQE True PC9_epitope_Rep1 1071.5600608155898 1071.5589699358602 72.04 2 -0.39987557625470155 0.10640759930915371 0.9438714419765777 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant', 'HMCN1|p.E3102Vfs*9|1|0.2|ENSG00000143341|chr1:186087585-186087586|AG/-|frameshift_variant', 'HMCN1|p.G1946Efs*22|1|0.29|ENSG00000143341|chr1:186038020-186038020|G/-|frameshift_variant', 'ENST00000493413.1_1_1:185934944-185947193:+|nuORF', 'ENST00000485744.5_1_1:185931700-185962449:+|nuORF', 'nc|ENSG00000143341|Q96RW7-3|HMCN1', 'HMCN1-IGLL5|1|fusion'] 75327 19991 NPYTLYTF True PC9_epitope_Rep4 1017.4807478657299 1017.4801749679301 85.029 1 -0.399902397357497 0.10642303241740211 0.9438714419765777 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF'] 39203 7272 HLGKVSKP True H1975_Epitope_Rep2 864.51813643396 864.51702993586 32.907 2 -0.400017400921483 0.10643662677236067 0.9438714419765777 ['nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1', 'ENSG00000179981|ENST00000580243|TSHZ1'] 62094 7177 LLNKSGPV True NCI_RA007_Epitope_Rep5 826.4912529797799 826.49014993586 34.283 2 -0.40005064562851966 0.10643662677236067 0.9438714419765777 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF'] 86269 8069 QQDIDDLK True H1975_Epitope_Rep1 973.47163973401 973.4710949679301 35.98 1 -0.4001015018534825 0.10646748985407133 0.9438714419765777 ['nc|ENSG00000125952|P61244-3|MAX', 'ENST00000557277.5_2_14:65544132-65569310:-|nuORF', 'nc|ENSG00000125952|P61244-4|MAX', 'nc|ENSG00000125952|P61244-2|MAX', 'ENST00000553951.1_1_14:65544523-65568380:-|nuORF', 'ENSG00000125952|ENST00000358664|MAX'] 23416 21312 EVVNKDVLDVY True H1975_Epitope_Rep2 1291.66598243611 1291.6648899358602 88.19 2 -0.4001123737888975 0.10646748985407133 0.9438714419765777 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 110482 5297 TIPRGDGVTP True H1975_Epitope_Rep3 1011.5349086969098 1011.53380993586 25.454 2 -0.4001679261394673 0.10650018996304356 0.9438714419765777 ['ENST00000480912.5_1_6:31847863-31860642:-|nuORF', 'nc|ENSG00000204371|Q96KQ7-2|EHMT2', 'ENSG00000204371|ENST00000375537|EHMT2'] 66240 9907 LSPVPALKPTP True H1975_Epitope_Rep2 1118.66994561774 1118.6688499358602 43.096 2 -0.4003273693438688 0.10655015801198474 0.9438714419765777 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 133183 7895 WDTGWCWLPR True NCI_RA007_Epitope_Rep3 1318.59171238038 1318.5906099358601 38.169 2 -0.40039414952472463 0.10658285556399806 0.9438714419765777 ['ENST00000562593.5_1_16:88909039-88909435:-|nuORF'] 86686 10730 QRIDEFEAM-[Oxidation] True PC9_epitope_Rep1 1153.5073740001699 1153.50626993586 46.161 2 -0.4004298752076153 0.10661555198673782 0.9438714419765777 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'nc|ENSG00000137710|P35241-3|RDX', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 106425 15469 SVTQSNKVSVT True PC9_epitope_Rep2 1148.6037165327198 1148.60260993586 64.779 2 -0.40049895837552324 0.10663719870156779 0.9438714419765777 ['nc|ENSG00000127947|Q05209-2|PTPN12', 'nc|ENSG00000127947|Q05209-3|PTPN12', 'ENSG00000127947|ENST00000248594|PTPN12'] 126269 11330 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 48.586 2 -0.40050376376398095 0.10663719870156779 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 130222 6240 VTSKERFLKSF True NCI_RA007_Epitope_Rep5 1340.7452358163198 1340.7436049037901 30.678 3 -0.4005339505216988 0.10663719870156779 0.9438714419765777 ['ENSG00000139547|ENST00000398138|RDH16'] 112178 9643 TLVTEPNSP True H1975_Epitope_Rep2 956.48147614172 956.48036993586 42.07 2 -0.4005739274452464 0.10663719870156779 0.9438714419765777 ['nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5'] 95845 4726 SDKPLIQDSD True NCI_RA007_Epitope_Rep5 1116.52988288612 1116.52878993586 24.862 2 -0.4005836357841579 0.10663719870156779 0.9438714419765777 ['ENSG00000128915|ENST00000261520|ICE2'] 112706 15357 TPGPKRERLI True PC9_epitope_Rep1 1165.69314067381 1165.69150490379 63.888 3 -0.4005873993661036 0.10663719870156779 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 93588 4465 RSVAHAAI True PC9_epitope_Rep6 823.46643521427 823.46532993586 24.357 2 -0.4005925751380363 0.10663719870156779 0.9438714419765777 ['ENSG00000171798|ENST00000304613|KNDC1', 'nc|ENSG00000171798|Q76NI1-4|KNDC1', 'ENST00000485110.5_1_10:134974025-134992777:+|nuORF', 'ENST00000478074.5_1_10:134974025-134987473:+|nuORF', 'ENST00000530127.1_1_10:134977709-134992395:+|nuORF'] 1296 14976 AEDTISILP True H1975_Epitope_Rep3 957.5018772331299 957.50132496793 62.992 1 -0.40066750230751663 0.10665262358202254 0.9438714419765777 ['ENSG00000258289|ENST00000549115|CHURC1', 'nc|ENSG00000258289|Q8WUH1-2|CHURC1', 'nc|ENSG00000258289|Q8WUH1-1|CHURC1'] 77733 6138 PAAMSWYEEF True NCI_RA007_Epitope_Rep5 1229.5063109905698 1229.5052099358602 30.291 2 -0.40071833483423175 0.10666436464088398 0.9438714419765777 ['ENSG00000159069|ENST00000325285|FBXW5', 'nc|ENSG00000159069|Q969U6-2|FBXW5'] 14500 8748 DTWESLQK True PC9_epitope_Rep3 1005.47672511445 1005.47562993586 38.603 2 -0.4007289734699248 0.10666436464088398 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 106990 19028 SYLERHGLINF True PC9_epitope_Rep5 1347.6935345966297 1347.69187490379 78.219 3 -0.40073668681205205 0.10666436464088398 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENST00000481879.1_1_1:23376923-23381674:+|nuORF'] 120882 7692 VGDVFRGG True PC9_epitope_Rep6 805.4082516318099 805.40714993586 38.914 2 -0.4008435243959794 0.10667978798708586 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 72011 19840 MQGPPLLTAA True PC9_epitope_Rep5 997.52665251233 997.5261049679301 81.362 1 -0.40088308955673935 0.10668968493741908 0.9438714419765777 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109', 'CD109|p.Y216Gfs*12|1|0.32|ENSG00000156535|chr6:73756655-73756668|TATCAATCATTTCA/G|frameshift_variant', 'nc|ENSG00000156535|Q6YHK3-3|CD109'] 6211 5637 APRCASCPP True H1975_Epitope_Rep2 900.3945927969598 900.39348993586 26.682 2 -0.40089148946329567 0.10668968493741908 0.9438714419765777 ['ENSG00000205899|ENST00000391429|BHLHA9'] 12583 9633 DLDRGPSTL True PC9_epitope_Rep3 972.48762415132 972.48652993586 42.003 2 -0.40089842367722806 0.10668968493741908 0.9438714419765777 ['ENSG00000164484|ENST00000296978|TMEM200A'] 118796 8322 VEEDQDPSCP True PC9_epitope_Rep1 1117.42336921225 1117.4222699358602 36.844 2 -0.4009262258565406 0.10668968493741908 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 114372 8054 TSDHDGKDNY True H1975_Epitope_Rep2 1150.45269519458 1150.45158993586 35.928 2 -0.4009370352142094 0.10670326445353635 0.9438714419765777 ['ENSG00000197410|ENST00000357232|DCHS2'] 22427 2711 ETFRLRFRQFR True NCI_RA007_Epitope_Rep2 1554.8531635558595 1554.85097987172 14.773 4 -0.40100287521332423 0.10670326445353635 0.9438714419765777 ['nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25', 'ENSG00000197037|ENST00000394152|ZSCAN25', 'ENST00000466948.1_1_7:99217289-99228306:+|nuORF', 'ENST00000481424.5_1_7:99217223-99217685:+|nuORF', 'nc|ENSG00000197037|Q6NSZ9-4|ZSCAN25'] 11236 3857 DEPEKERLRQR True NCI_RA007_Epitope_Rep2 1454.7589883875 1454.75734490379 19.638 3 -0.40103684828810837 0.10671868526446623 0.9438714419765777 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF', 'nc|ENSG00000123243|Q86UX2-3|ITIH5', 'nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 15160 6447 EAESAREQLQ True H1975_Epitope_Rep3 1159.5469299325898 1159.5458299358602 29.772 2 -0.40110459737944015 0.10676863056500198 0.9438714419765777 ['nc|ENSG00000066455|Q8TBA6-2|GOLGA5', 'ENSG00000066455|ENST00000163416|GOLGA5'] 23021 5877 EVKDVQLHLER True NCI_RA007_Epitope_Rep5 1364.7412130650398 1364.7395549037901 29.293 3 -0.4011446485827972 0.10683399216309057 0.9438714419765777 ['nc|ENSG00000120656|Q16514-2|TAF12', 'ENST00000471683.5_1_1:28916264-28944539:-|nuORF', 'ENSG00000120656|ENST00000373824|TAF12'] 75237 6714 NPKEFYHEV True PC9_epitope_Rep4 1161.54547338061 1161.54436993586 33.012 2 -0.4011494905140896 0.10683399216309057 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 14772 4529 DWGQRPENK True NCI_RA007_Epitope_Rep5 1128.5312202988 1128.53012993586 24.075 2 -0.40128193821603925 0.10688208792915954 0.9438714419765777 ['ENST00000366997.8_1_1:211916964-211917153:-|nuORF'] 44299 11809 ILYCVCKKWEI True NCI_RA007_Epitope_Rep2 1396.7247006958798 1396.7236099358602 50.534 2 -0.4013157665151976 0.10688208792915954 0.9438714419765777 ['nc|ENSG00000161929|Q6UWF3-2|SCIMP', 'nc|ENSG00000161929|Q6UWF3-3|SCIMP'] 129882 8815 VTLSAYITI True PC9_epitope_Rep6 979.55899818643 979.55790993586 43.818 2 -0.40136287664527315 0.10691476507750199 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000024146', 'ENSG00000175899|ENST00000318602|A2M'] 72767 8396 NAEIEPDDY True H1975_Epitope_Rep1 1064.42983449168 1064.42872993586 37.223 2 -0.40140733159339853 0.10693018037455769 0.9438714419765777 ['nc|ENSG00000157036|Q9Y2C4-3|EXOG', 'nc|ENSG00000157036|Q9Y2C4-4|EXOG', 'ENSG00000157036|ENST00000287675|EXOG'] 12816 21122 DLKGTAAPTL True PC9_epitope_Rep1 985.5444107514498 985.54330993586 86.075 2 -0.40149737692557347 0.10699552962700865 0.9438714419765777 ['ENSG00000101825|ENST00000217939|MXRA5', 'MXRA5|p.T935Pfs*59|2|0.14|ENSG00000101825|chrX:3322883-3322883|G/-|frameshift_variant', 'MXRA5|p.G1254Dfs*31|1|0.44|ENSG00000101825|chrX:3321924-3321924|C/-|frameshift_variant'] 75328 18858 NPYTLYTF True PC9_epitope_Rep6 1017.4807478657299 1017.4801749679301 85.185 1 -0.40150132285009726 0.10699552962700865 0.9438714419765777 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF'] 25705 10868 FFHFFSSL True NCI_RA007_Epitope_Rep3 1030.4912529797798 1030.49014993586 49.809 2 -0.4015798387373095 0.10702635530471703 0.9438714419765777 ['ENST00000556419.5_1_14:23468454-23479348:-|nuORF'] 57572 7778 LELEERERRSP True H1975_Epitope_Rep3 1412.73719031376 1412.73553490379 34.902 3 -0.4015805347583908 0.10702635530471703 0.9438714419765777 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-5|JAKMIP1', 'nc|ENSG00000176049|Q96AA8-2|JAKMIP2', 'nc|ENSG00000176049|Q96AA8|JAKMIP2', 'ENSG00000176049|ENST00000616793|JAKMIP2', 'nc|ENSG00000176049|Q96AA8-4|JAKMIP2'] 8776 10481 AVELLKQID True NCI_RA007_Epitope_Rep2 1027.5913609438699 1027.59026993586 45.362 2 -0.4017563932149188 0.10707443779016586 0.9438714419765777 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 79407 20133 PGLWGLAA True PC9_epitope_Rep5 783.4279244472299 783.4273749679301 82.489 1 -0.40177775864211357 0.10707443779016586 0.9438714419765777 ['ENST00000578846.5_1_17:80019305-80021015:-|nuORF'] 39908 12611 HQLESILAM-[Oxidation] True PC9_epitope_Rep4 1056.5273811687598 1056.5262899358602 56.347 2 -0.4018392037407842 0.10708984846915881 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 3803 9055 AGVLREEIQ True PC9_epitope_Rep6 1013.5505587610498 1013.54946993586 44.887 2 -0.401846938021722 0.10709601711879616 0.9438714419765777 ['ENSG00000145087|ENST00000471454|STXBP5L', 'nc|ENSG00000145087|Q9Y2K9|STXBP5L', 'nc|ENSG00000145087|Q9Y2K9-2|STXBP5L', 'STXBP5L|p.P692Tfs*22|1|0.3|ENSG00000145087|chr3:121279917-121279918|-/A|frameshift_variant'] 23216 16578 EVQKTEESKVP True PC9_epitope_Rep1 1272.6561460284 1272.65504993586 68.591 2 -0.4018754604391476 0.10709601711879616 0.9438714419765777 ['ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 117501 11145 VAERVYREI True PC9_epitope_Rep1 1133.61930702721 1133.61766490379 47.753 3 -0.4018813943968989 0.10709601711879616 0.9438714419765777 ['ENSG00000197408|ENST00000324071|CYP2B6'] 105648 22968 SVFLRRRYQSR True NCI_RA007_Epitope_Rep1 1466.82186342758 1466.8207699358602 94.33 2 -0.40194284823733845 0.10709601711879616 0.9438714419765777 ['ZDBF2|p.H2236R|1|0.4|ENSG00000204186|chr2:206311235-206311235|A/G|missense_variant'] 29867 16568 FVWSGTAEA True PC9_epitope_Rep6 966.4446967101799 966.44358993586 76.169 2 -0.40198271381006345 0.10709601711879616 0.9438714419765777 ['ENSG00000124422|ENST00000261497|USP22', 'USP22|p.L465Vfs*5|1|0.64|ENSG00000124422|chr17:21004343-21004344|AG/-|frameshift_variant'] 78035 6588 PALPPQAH True PC9_epitope_Rep1 829.44463714053 829.44354993586 30.146 2 -0.4020207582376351 0.10709601711879616 0.9438714419765777 ['ENST00000478665.1_1_2:132285543-132287284:+|nuORF'] 86219 5021 QPWRGGAGA True PC9_epitope_Rep3 898.4409487424198 898.43984993586 24.404 2 -0.4020583535725444 0.10712868211703394 0.9438714419765777 ['ENSG00000165684|ENST00000684778|SNAPC4'] 135847 10582 YEQMERRRERR True H1975_Epitope_Rep1 1607.8062900164298 1607.8046549037902 45.658 3 -0.402121113482982 0.10714224085865645 0.9438714419765777 ['ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-3|SPTBN4'] 5416 18863 ALVVGPPET True PC9_epitope_Rep5 881.48583324617 881.48472993586 77.574 2 -0.4021253970490115 0.10714224085865645 0.9438714419765777 ['ENSG00000135631|ENST00000486777|RAB11FIP5'] 54761 11582 LAEQPWPPLP True PC9_epitope_Rep3 1146.6073453611798 1146.6062499358602 49.565 2 -0.4022063562754205 0.10715579866443498 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 98442 19540 SIIVFLQGV True PC9_epitope_Rep1 974.5800679841799 974.57896993586 79.983 2 -0.4022207667355409 0.10715579866443498 0.9438714419765777 ['ENST00000394524.7_1_4:114374303-114374375:-|nuORF'] 129150 18002 VTDDLVCLVY True H1975_Epitope_Rep1 1138.55801221026 1138.5569099358602 75.005 2 -0.40228846103589605 0.1071656572976517 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 11885 15037 DHPPSSVISL True PC9_epitope_Rep5 1050.5345743437401 1050.53346993586 62.844 2 -0.40229727070022736 0.1071656572976517 0.9438714419765777 ['PCLO|p.A2349S|1|0.29|ENSG00000186472|chr7:82953908-82953908|C/A|missense_variant'] 118977 19498 VEFDFIPDV True H1975_Epitope_Rep3 1079.51752729727 1079.5169749679299 81.714 1 -0.40230715402199063 0.1071656572976517 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000518968.1_1_8:50652851-50653445:-|nuORF'] 72790 17492 NAFSGVMML True H1975_Epitope_Rep2 968.44595966348 968.4454149679301 72.574 1 -0.40231885290473235 0.1071656572976517 0.9438714419765777 ['ENST00000368287.1_1_6:127648134-127664493:-|nuORF', 'nc|ENSG00000093144|Q9NTX5-5|ECHDC1', 'nc|ENSG00000093144|Q9NTX5-6|ECHDC1', 'ENSG00000093144|ENST00000454859|ECHDC1', 'nc|ENSG00000093144|Q9NTX5|ECHDC1'] 46561 21455 ITREAMLKV True PC9_epitope_Rep1 1059.61105084263 1059.6099499358602 87.367 2 -0.4023659265036 0.1071909181877782 0.9438714419765777 ['ENSG00000182798|ENST00000400004|MAGEB17'] 100207 6461 SLLKLQQQ True PC9_epitope_Rep6 956.5654805492 956.56438993586 33.492 2 -0.40239850249751924 0.1071909181877782 0.9438714419765777 ['ENSG00000136367|ENST00000419474|ZFHX2'] 67631 11149 LTEYQIAV True PC9_epitope_Rep3 935.4963979298698 935.49530993586 47.884 2 -0.4024110133642013 0.1071909181877782 0.9438714419765777 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF', 'COL14A1|p.W717*|1|0.21|ENSG00000187955|chr8:120228722-120228722|G/-|frameshift_variant'] 97588 8469 SGYRKRGPK True H1975_Epitope_Rep1 1047.5937609857099 1047.5926699358602 37.505 2 -0.4024343596093476 0.1071909181877782 0.9438714419765777 ['ENSG00000100307|ENST00000216133|CBX7'] 71590 18444 MLHLFESI True PC9_epitope_Rep2 988.50518879176 988.50408993586 76.277 2 -0.40245863644815133 0.1071909181877782 0.9438714419765777 ['nc|ENSG00000162869|Q6ZMI0-5|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-2|PPP1R21', 'ENSG00000162869|ENST00000294952|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-3|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-4|PPP1R21'] 119600 15355 VERRRRRGP True H1975_Epitope_Rep2 1180.7013543720798 1180.70024993586 64.221 2 -0.4025391615433536 0.10721987406193392 0.9438714419765777 ['ENST00000230859.7_2_5:6713753-6713927:+|nuORF'] 140790 6838 YYRYIRFFPD True PC9_epitope_Rep6 1438.7033710043397 1438.70173490379 35.17 3 -0.4025495917592848 0.10721987406193392 0.9438714419765777 ['nc|ENSG00000112146|Q9UK97-3|FBXO9', 'ENSG00000112146|ENST00000323557|FBXO9', 'nc|ENSG00000112146|Q9UK97|FBXO9'] 63154 7231 LNRRRQQQTPS True H1975_Epitope_Rep1 1382.7490924101398 1382.74798993586 32.824 2 -0.40255087355320535 0.10721987406193392 0.9438714419765777 ['ENSG00000189431|ENST00000529419|RASSF10'] 11144 7862 DEFLWREQFYR True NCI_RA007_Epitope_Rep3 1587.7470267214699 1587.7453949037902 38.044 3 -0.4025895690920441 0.10723342591474459 0.9438714419765777 ['ENSG00000159069|ENST00000325285|FBXW5', 'nc|ENSG00000159069|Q969U6-2|FBXW5'] 128254 9075 VSAAQPLSP True H1975_Epitope_Rep2 868.4654321547599 868.46432993586 39.859 2 -0.40259095137998796 0.10723342591474459 0.9438714419765777 ['ENST00000262848.5_1_X:3631394-3631646:-|nuORF'] 107575 17372 TAEM[Oxidation]LNYSV True PC9_epitope_Rep4 1042.4641122058601 1042.46300993586 74.824 2 -0.40261050614007243 0.10724882693900083 0.9438714419765777 ['nc|ENSG00000134900|P29144|TPP2', 'ENSG00000134900|ENST00000376052|TPP2'] 888 4670 ADLSKYNPGP True NCI_RA007_Epitope_Rep4 1060.5189242796 1060.5178299358602 24.385 2 -0.40261963295988307 0.10729317601600773 0.9438714419765777 ['ENST00000340417.7_1_4:83931860-83931938:-|nuORF'] 112272 11458 TLYRRRLYRE True NCI_RA007_Epitope_Rep2 1424.80006535384 1424.7989699358602 49.162 2 -0.40262410106791696 0.10729317601600773 0.9438714419765777 ['ENST00000548759.1_1_12:113495266-113495848:+|nuORF'] 100807 14940 SLRTALILH True PC9_epitope_Rep1 1022.62366413166 1022.62256993586 62.289 2 -0.40263960010779015 0.10729317601600773 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 116979 20933 TYPNTYIF True PC9_epitope_Rep5 1017.48074786573 1017.4801749679301 85.576 1 -0.4026970462631309 0.10729317601600773 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 112658 20942 TPFLPFASTL True PC9_epitope_Rep6 1092.58554728744 1092.5844499358602 93.337 2 -0.4027483445786828 0.10730857468131716 0.9438714419765777 ['ENST00000530791.5_1_11:65687869-65688903:+|nuORF', 'ENSG00000175550|ENST00000312515|DRAP1', 'nc|ENSG00000175550|Q14919-2|DRAP1', 'ENST00000525190.1_1_11:65688642-65688903:+|nuORF'] 99181 15525 SLARHAGQCL True PC9_epitope_Rep5 1054.5341975042597 1054.53310993586 64.726 2 -0.402760436395283 0.10732212160413972 0.9438714419765777 ['ENST00000274026.9_1_4:122744785-122745025:-|nuORF'] 40784 11114 HVGCTNSSWVL True PC9_epitope_Rep6 1201.55499251849 1201.55335490379 53.687 3 -0.4027929587576835 0.10732212160413972 0.9438714419765777 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant'] 40783 11663 HVGCTNSSWVL True PC9_epitope_Rep4 1201.55499251849 1201.55335490379 52.623 3 -0.4028676058989776 0.10737201600662342 0.9438714419765777 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant'] 33561 17153 GLKIGDTV True PC9_epitope_Rep4 801.45961849833 801.45852993586 73.985 2 -0.4028923282131706 0.10740095551837735 0.9438714419765777 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 46701 14592 ITYERKIQI True PC9_epitope_Rep1 1162.6710082468999 1162.66936490379 60.952 3 -0.4029481303133577 0.10740095551837735 0.9438714419765777 ['ENST00000335154.9_1_12:50032767-50032947:-|nuORF'] 64084 4764 LQEAYLWTK True NCI_RA007_Epitope_Rep2 1150.60225998074 1150.60116993586 23.161 2 -0.4029658745934354 0.10740095551837735 0.9438714419765777 ['DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant', 'ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 46979 11090 IVPDAVQVH True PC9_epitope_Rep4 976.5341804209199 976.53308993586 50.433 2 -0.40299334526691655 0.10741635046567782 0.9438714419765777 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant', 'KMT2C|p.Q726Rfs*4|1|0.29|ENSG00000055609|chr7:152248254-152248258|TTCTG/-|frameshift_variant', 'KMT2C|p.V996Wfs*35|1|0.15|ENSG00000055609|chr7:152224608-152224608|T/-|frameshift_variant'] 41631 4200 IDHLEQEKQIK True NCI_RA007_Epitope_Rep4 1379.74087871187 1379.73922490379 22.463 3 -0.40301102876270684 0.10742989203545929 0.9438714419765777 ['ENSG00000119684|ENST00000355774|MLH3', 'nc|ENSG00000119684|Q9UHC1-2|MLH3', 'ENST00000555415.1_1_14:75483787-75485735:-|nuORF'] 92979 9011 RRQNLYIWRFR True NCI_RA007_Epitope_Rep2 1606.89569707418 1606.89349987172 39.652 4 -0.4030303557036566 0.10742989203545929 0.9438714419765777 ['ENST00000521082.5_1_7:23205510-23207476:+|nuORF'] 43192 17767 IGTDHLPVL True PC9_epitope_Rep1 963.5389314481899 963.53782993586 73.138 2 -0.40304174978938845 0.10744343267108168 0.9438714419765777 ['ENSG00000181378|ENST00000341552|CFAP65'] 55642 9166 LDAFYSSIIVP True H1975_Epitope_Rep1 1223.64379043955 1223.64268993586 40.162 2 -0.40307016206013097 0.10744343267108168 0.9438714419765777 ['ENSG00000198678|ENST00000328207|OR5BS1P'] 111710 11883 TLPSLESLE True PC9_epitope_Rep1 987.51244191683 987.51134993586 50.574 2 -0.4030960254994694 0.10745882555833405 0.9438714419765777 ['ENST00000512908.2_1_5:70398727-70422449:-|nuORF', 'ENST00000315147.8_1_5:70265933-70281744:-|nuORF', 'ENST00000511830.2_1_5:69390488-69422514:-|nuORF', 'nc|ENSG00000249437|Q13075-2|NAIP', 'ENSG00000249437|ENST00000517649|NAIP'] 97147 19245 SFFHFM[Oxidation]LFLA True PC9_epitope_Rep4 1274.6158022503398 1274.6147099358602 82.128 2 -0.40314477646225116 0.10750870899872383 0.9438714419765777 ['ENSG00000111897|ENST00000339697|SERINC1'] 10813 8443 DAGAGIALNDH True PC9_epitope_Rep6 1052.48868678048 1052.4875899358601 42.171 2 -0.4031573960342523 0.10751853767891016 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 68965 11790 LVGGEKRL True PC9_epitope_Rep3 870.5287011176599 870.52760993586 50.367 2 -0.40318500288540804 0.10751853767891016 0.9438714419765777 ['ENST00000373425.7_1_9:129884890-129885061:-|nuORF'] 62909 23026 LMVMRRLL True PC9_epitope_Rep1 1030.6143624012598 1030.6132699358602 93.369 2 -0.4031900388258279 0.10751853767891016 0.9438714419765777 ['ENST00000430945.5_1_9:94907296-94910408:+|nuORF'] 33704 21796 GLQLVGYILGL True PC9_epitope_Rep4 1144.68559568188 1144.68448993586 92.032 2 -0.4031914677152814 0.10751853767891016 0.9438714419765777 ['ENSG00000165376|ENST00000336803|CLDN2'] 114680 8137 TSRVTDSSSKV True NCI_RA007_Epitope_Rep3 1165.59388012501 1165.59278993586 39.115 2 -0.40324184634272253 0.10753207338943302 0.9438714419765777 ['ENST00000506216.5_1_4:5749932-5890196:-|nuORF'] 97028 3877 SEVWKKRKKMG True NCI_RA007_Epitope_Rep3 1375.7758247519498 1375.77418490379 21.519 3 -0.4032561253979186 0.10753207338943302 0.9438714419765777 ['ENST00000266735.9_1_12:96259790-96259841:+|nuORF'] 100095 19744 SLKVRKWRSI True PC9_epitope_Rep5 1271.78262438455 1271.78098490379 80.99 3 -0.4033207304506735 0.10756470608521718 0.9438714419765777 ['ENST00000461003.5_1_1:161022149-161022579:-|nuORF', 'nc|ENSG00000186517|Q7Z6I6-2|ARHGAP30', 'nc|ENSG00000186517|Q7Z6I6-3|ARHGAP30', 'ARHGAP30|p.R1071Qfs*7|1|0.18|ENSG00000186517|chr1:161047810-161047811|-/G|frameshift_variant', 'ENSG00000186517|ENST00000368013|ARHGAP30'] 930 14162 ADSEALFGVP True NCI_RA007_Epitope_Rep3 1004.4814761417199 1004.48097496793 62.995 1 -0.40341112994531786 0.10763182398179122 0.9438714419765777 ['ENSG00000173214|ENST00000671876|MFSD4B'] 140315 15926 YYEDNKQFF True PC9_epitope_Rep5 1252.540053647 1252.53894993586 66.25 2 -0.40343061036717826 0.10764535485205877 0.9438714419765777 ['nc|ENSG00000184752|Q9UI09-2|NDUFA12', 'ENSG00000184752|ENST00000327772|NDUFA12'] 139965 21541 YVIQKFFEF True PC9_epitope_Rep2 1219.62774645259 1219.62664993586 88.324 2 -0.40345785846271254 0.10764535485205877 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 42336 15501 IELGWEVI True PC9_epitope_Rep6 957.5171333744499 957.51602993586 71.805 2 -0.4034813776453474 0.10765331632213238 0.9438714419765777 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant', 'ATM|p.Q1116Sfs*10|1|0.39|ENSG00000149311|chr11:108279550-108279550|T/-|frameshift_variant'] 118962 13136 VEEWKCMYTP True H1975_Epitope_Rep2 1284.5518812839998 1284.5507899358602 55.649 2 -0.40350602240331845 0.10765331632213238 0.9438714419765777 ['ENSG00000178031|ENST00000380548|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-2|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-1|ADAMTSL1', 'ENST00000546040.1_1_9:18657630-18684799:+|nuORF'] 46453 12363 ITLVHQFYFP True H1975_Epitope_Rep2 1263.66519459047 1263.66355490379 52.639 3 -0.4035076286667469 0.10765331632213238 0.9438714419765777 ['ENST00000502953.1_1_5:54623411-54635894:+|nuORF'] 112176 10621 TLVSSVLP True NCI_RA007_Epitope_Rep1 814.48001958974 814.47892993586 45.301 2 -0.40350882978892116 0.10765331632213238 0.9438714419765777 ['nc|ENSG00000213672|Q9NZQ3-2|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-5|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-4|NCKIPSD', 'nc|ENSG00000213672|Q9NZQ3-3|NCKIPSD', 'ENSG00000213672|ENST00000294129|NCKIPSD', 'ENST00000470006.1_1_3:48716398-48717131:-|nuORF'] 44431 6169 INISEGNC[Carbamidomethyl]PER True NCI_RA007_Epitope_Rep1 1287.58774947818 1287.5866499358601 28.032 2 -0.4035238056714474 0.10765331632213238 0.9438714419765777 ['nc|ENSG00000197111|Q15366-4|PCBP2', 'nc|ENSG00000197111|Q15366-5|PCBP2', 'nc|ENSG00000197111|Q15366-6|PCBP2', 'ENSG00000197111|ENST00000546463|PCBP2', 'nc|ENSG00000197111|Q15366|PCBP2', 'nc|ENSG00000197111|Q15366-2|PCBP2', 'nc|ENSG00000197111|Q15366-7|PCBP2', 'nc|ENSG00000197111|Q15366-8|PCBP2', 'ENST00000547717.1_1_12:53848575-53861193:+|nuORF', 'ENST00000498121.1_1_21:47289198-47321357:+|nuORF', 'ENSG00000169564|ENST00000303577|PCBP1', 'PCBP1|p.W271Mfs*16|1|0.15|ENSG00000169564|chr2:70088554-70088566|TGGGCAAGTTTGG/-|frameshift_variant', 'nc|ENSG00000183570|P57721-2|PCBP3', 'nc|ENSG00000183570|P57721-3|PCBP3', 'nc|ENSG00000183570|P57721-5|PCBP3', 'nc|ENSG00000183570|P57721-4|PCBP3', 'ENSG00000183570|ENST00000681687|PCBP3'] 119345 10053 VEMQTMQRL True PC9_epitope_Rep1 1134.55254999034 1134.55090490379 43.537 3 -0.40361385088570234 0.10768594186407365 0.9438714419765777 ['nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2', 'SPEF2|p.D702Mfs*8|1|0.22|ENSG00000152582|chr5:35697755-35697755|T/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-3|SPEF2', 'ENST00000505088.1_1_5:35618099-35641794:+|nuORF', 'ENST00000505847.5_2_5:35618099-35643627:+|nuORF'] 62335 11972 LLRGRFAP True PC9_epitope_Rep5 928.5606699522798 928.5595699358599 51.046 2 -0.40371522441253926 0.10769575561148846 0.9438714419765777 ['ENSG00000005238|ENST00000322813|ATOSB', 'nc|ENSG00000005238|Q7L5A3-2|ATOSB', 'nc|ENSG00000005238|Q7L5A3-3|ATOSB'] 11065 8334 DDSDPFSFDGP True H1975_Epitope_Rep2 1197.44621283181 1197.44510993586 37.008 2 -0.4037239471228067 0.10769575561148846 0.9438714419765777 ['nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1'] 135211 16956 YAWNHQTV True PC9_epitope_Rep5 1017.4668291370899 1017.4657299358599 70.239 2 -0.40375322063571883 0.10769575561148846 0.9438714419765777 ['ENST00000537833.5_1_12:7250950-7252531:-|nuORF'] 116166 15235 TVTGVSLSIV True PC9_epitope_Rep1 974.56481184286 974.56370993586 63.421 2 -0.4037748655165869 0.10769575561148846 0.9438714419765777 ['ENST00000396267.1_2_17:8272399-8272447:-|nuORF'] 22867 10924 EVERQKSI True PC9_epitope_Rep1 987.5349086969098 987.53380993586 46.905 2 -0.40381329898944684 0.10771113831089352 0.9438714419765777 ['nc|ENSG00000213085|Q9UL16-2|CFAP45', 'ENSG00000213085|ENST00000368099|CFAP45'] 23634 8200 EYFWRIAWRFW True NCI_RA007_Epitope_Rep2 1658.8146527888198 1658.8129949037898 36.531 3 -0.4038401092189916 0.10774375948145083 0.9438714419765777 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 27075 9378 FLPLPVLDP True NCI_RA007_Epitope_Rep5 1009.5848190114499 1009.58372993586 42.713 2 -0.4039412266508181 0.10779176004137218 0.9438714419765777 ['ENST00000607190.1_1_2:20101816-20101957:+|nuORF'] 18091 5272 EIKRQEAI True NCI_RA007_Epitope_Rep4 985.5556441414899 985.55454993586 26.829 2 -0.40394790363623884 0.10779176004137218 0.9438714419765777 ['ENSG00000163947|ENST00000296315|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-3|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-2|ARHGEF3', 'ARHGEF3|p.F128S|1|0.34|ENSG00000163947|chr3:56753559-56753559|A/G|missense_variant'] 3624 9697 AGPRVTLAA True PC9_epitope_Rep5 854.4974009893799 854.49630993586 42.267 2 -0.4039661884221339 0.10780714002516764 0.9438714419765777 ['ENST00000323249.7_1_5:176881025-176882032:+|nuORF', 'ENST00000502922.5_1_5:176873849-176882032:+|nuORF'] 82099 8140 PTAEGLAAA True PC9_epitope_Rep6 799.4075829254699 799.40648993586 40.854 2 -0.40404282829106175 0.10783975729159484 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 68019 9843 LTMRLWHVLT True NCI_RA007_Epitope_Rep2 1268.7063482098 1268.7052499358601 42.912 2 -0.4040862367450492 0.10785327679525632 0.9438714419765777 ['ENST00000495528.1_1_10:17275586-17275664:+|nuORF'] 104604 3778 SSTTKSLLSP True NCI_RA007_Epitope_Rep2 1019.54989005471 1019.54878993586 19.335 2 -0.4040937467460215 0.10785327679525632 0.9438714419765777 ['ENST00000331825.10_1_19:49469930-49470038:+|nuORF'] 81116 2756 PPHPPPPPP True H1975_Epitope_Rep2 931.49158733295 931.49048993586 14.629 2 -0.404293447052054 0.10786865465827804 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 115491 8670 TVGEITDALKK True H1975_Epitope_Rep1 1173.6605031328497 1173.6594099358601 38.278 2 -0.40437356271586244 0.10788403199117484 0.9438714419765777 ['ENSG00000146085|ENST00000274813|MMUT'] 66538 18181 LSSGNNLFF True PC9_epitope_Rep5 997.48689587533 997.48578993586 74.943 2 -0.4044502666968187 0.10791664512125757 0.9438714419765777 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 13112 11104 DLSIVRLRF True H1975_Epitope_Rep1 1117.6607779163699 1117.6596899358601 47.676 2 -0.4045653449149042 0.10794739654251194 0.9438714419765777 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2'] 77884 12361 PAGSIISLNAA True PC9_epitope_Rep5 1012.55530978832 1012.55420993586 52.542 2 -0.4045677600109446 0.10794739654251194 0.9438714419765777 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 41266 11265 IAFRRLSL True NCI_RA007_Epitope_Rep4 974.6025347642599 974.60142993586 50.223 2 -0.40465697129995676 0.10795718939041414 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 118788 14810 VEEALKKMFN True NCI_RA007_Epitope_Rep1 1207.6270948295899 1207.6259899358602 61.666 2 -0.40468171211340775 0.10795718939041414 0.9438714419765777 ['ZHX2|p.R330L|1|0.22|ENSG00000178764|chr8:122952499-122952499|G/T|missense_variant'] 100861 3584 SLSFFFVFRDR True NCI_RA007_Epitope_Rep2 1419.72992010535 1419.7282649037902 18.59 3 -0.40469710581939383 0.10795718939041414 0.9438714419765777 ['ENST00000393892.7_1_17:40126102-40126558:+|nuORF'] 56177 16884 LDNYFRHLWNK True PC9_epitope_Rep3 1504.75753183552 1504.75588490379 70.1 3 -0.40470753975299967 0.10795718939041414 0.9438714419765777 ['ENSG00000196511|ENST00000360057|TPK1'] 75695 18835 NQVALPNI True PC9_epitope_Rep1 867.48141657207 867.48030993586 77.233 2 -0.40472427351503226 0.10796698088820722 0.9438714419765777 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 8926 17933 AVGLHAAVTL True PC9_epitope_Rep1 950.5549158655 950.55380993586 73.77 2 -0.40478048878626166 0.10796698088820722 0.9438714419765777 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 22489 6775 ETIEERDKRQQ True H1975_Epitope_Rep1 1430.71136948874 1430.70973490379 31.103 3 -0.4047999614543503 0.10796698088820722 0.9438714419765777 ['ENST00000461395.5_1_2:220378960-220396865:+|nuORF'] 48154 5348 KARKVIVEL True NCI_RA007_Epitope_Rep3 1054.6862643882198 1054.6851699358601 28.044 2 -0.40480667090803796 0.10796698088820722 0.9438714419765777 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|123|3|sense', 'nc|ENSG816|P62685|ERVK-8_gag', 'nc|ENSG846|Q9YNA8|ERVK-19_gag', 'nc|ENSG841|P62683|ERVK-21_gag', 'nc|ENSG838|P63145|ERVK-24_gag', 'nc|ENSG827|Q7LDI9|ERVK-6_gag', 'nc|ENSG820|P63130|ERVK-7_gag', 'nc|ENSG810|P63126|ERVK-9_gag', 'nc|ENSG800|P62684|HERVK_113_gag', 'nc|ENSG809|P63128|ERVK-9_pol'] 93363 15987 RRVHLGTG True NCI_RA007_Epitope_Rep2 894.5147823890198 894.51368993586 66.903 2 -0.4048656691052792 0.1079786317422023 0.9438714419765777 ['ENST00000368674.5_1_10:128191356-128211334:-|nuORF', 'nc|nan|Q96M02-2|C10orf90', 'nc|nan|Q96M02|C10orf90', 'ENSG00000154493|ENST00000488181|C10orf90'] 18327 17030 EIVRHYSLF True PC9_epitope_Rep5 1162.6134933707801 1162.6118549037901 70.523 3 -0.4048979478952393 0.1079786317422023 0.9438714419765777 ['DENND2A|p.G912R|1|0.41|ENSG00000146966|chr7:140522032-140522032|C/G|missense_variant'] 108806 4387 TEQIRREIAA True H1975_Epitope_Rep3 1185.6465844042102 1185.64492490379 21.995 3 -0.40489994904236315 0.1079786317422023 0.9438714419765777 ['ENSG00000019995|ENST00000359653|ZRANB1'] 79471 12826 PGPPWKPLMDP True H1975_Epitope_Rep2 1233.6216155263298 1233.6199649037899 54.444 3 -0.40492655380536735 0.107990281391622 0.9438714419765777 ['ENST00000463973.5_1_20:34206447-34206702:+|nuORF'] 103077 7409 SQLHRQWSP True H1975_Epitope_Rep2 1137.56794016069 1137.56684993586 33.441 2 -0.4049447183797651 0.107990281391622 0.9438714419765777 ['ENST00000396191.5_1_7:32109982-32110375:-|nuORF'] 32581 11623 GHAIQTAGVAE True PC9_epitope_Rep1 1052.5250722892 1052.5239699358601 49.586 2 -0.4050130482330339 0.107990281391622 0.9438714419765777 ['ENST00000411826.1_1_6:114383905-114384022:-|nuORF'] 52956 6586 KRLRKFGFR True NCI_RA007_Epitope_Rep5 1206.7461793061798 1206.74452490379 31.994 3 -0.40509420135036195 0.10804011441568735 0.9438714419765777 ['ENSG00000073734|ENST00000650372|ABCB11'] 70312 23420 LYPGIVTFVI True PC9_epitope_Rep3 1120.65323292444 1120.65212993586 95.363 2 -0.40513575134919494 0.10805362188986146 0.9438714419765777 ['ENSG00000188037|ENST00000343257|CLCN1'] 11062 7660 DDRNPLAI True PC9_epitope_Rep1 912.4664947839199 912.46538993586 34.287 2 -0.405153402069398 0.10805362188986146 0.9438714419765777 ['nc|ENSG00000183762|Q96MU8-2|KREMEN1'] 118798 11113 VEEDQDPSCP True PC9_epitope_Rep1 1117.42336921225 1117.4222699358602 47.631 2 -0.4052206524256344 0.10805409596003102 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 56534 13655 LDVEFSVP True PC9_epitope_Rep1 904.45419876472 904.45310993586 57.379 2 -0.4052379606615716 0.10805409596003102 0.9438714419765777 ['ENST00000506067.1_1_9:99660395-99681090:-|nuORF'] 99131 4923 SLAICHCVTP True H1975_Epitope_Rep3 1042.49397248506 1042.4928699358602 24.062 2 -0.40524195536230206 0.10805409596003102 0.9438714419765777 ['ENST00000377710.9_1_20:17971363-17971543:+|nuORF'] 110070 8312 TIADSATSP True H1975_Epitope_Rep2 861.4079768482901 861.4074249679301 36.923 1 -0.40534961372419637 0.10805409596003102 0.9438714419765777 ['ENSG00000120278|ENST00000696526|PLEKHG1', 'PLEKHG1-MTHFD1L|1|fusion', 'PLEKHG1-MTHFD1L|5|fusion', 'PLEKHG1-MTHFD1L|6|fusion'] 66502 19279 [Acetylation]-LSSALVLF True NCI_RA007_Epitope_Rep2 890.51132003432 890.51077496793 79.892 1 -0.4053771076064958 0.10805409596003102 0.9438714419765777 ['ENST00000304032.12_1_2:237036907-237036982:+|nuORF'] 37454 19728 GYADIVQLL True NCI_RA007_Epitope_Rep1 990.5385970950199 990.53750993586 80.924 2 -0.4053854238280863 0.10805409596003102 0.9438714419765777 ['ENSG00000134996|ENST00000346234|OSTF1'] 60397 10872 LIILVSDGDP True H1975_Epitope_Rep2 1040.57537652656 1040.57426993586 46.849 2 -0.40539375646409975 0.10805409596003102 0.9438714419765777 ['CON__Q9TRI1', 'ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.H695Tfs*6|1|0.19|ENSG00000151655|chr10:7738744-7738745|-/A|frameshift_variant'] 83641 10147 QEAEAWLN True H1975_Epitope_Rep3 959.4348603024699 959.43376993586 44.074 2 -0.405410848801589 0.10805409596003102 0.9438714419765777 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1'] 25950 12431 FGSGAGSSSF True PC9_epitope_Rep1 902.37701107318 902.37590993586 52.679 2 -0.40543010472537655 0.10805409596003102 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF'] 114678 5190 TSRRFLQGP True NCI_RA007_Epitope_Rep5 1060.5777765683997 1060.57666993586 26.659 2 -0.4055292993726041 0.10808482781194549 0.9438714419765777 ['ENST00000289753.1_1_1:19991838-19992072:+|nuORF'] 68182 3957 LTQENRRVT True NCI_RA007_Epitope_Rep4 1115.60471959223 1115.60362993586 21.456 2 -0.4055755649519377 0.10808482781194549 0.9438714419765777 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 139549 12574 YTLRSLSSL True PC9_epitope_Rep6 1038.57095985246 1038.5698699358602 59.808 2 -0.40563121517656564 0.10810019294377067 0.9438714419765777 ['ENSG00000151229|ENST00000280871|SLC2A13'] 15270 13657 EAGSTSWDGSL True H1975_Epitope_Rep2 1108.46728262956 1108.46618993586 57.671 2 -0.4057509696558864 0.10810438377400741 0.9438714419765777 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D'] 93018 7733 RRRELWFWWRG True NCI_RA007_Epitope_Rep5 1646.8694823263397 1646.86783490379 36.445 3 -0.4057827992316121 0.10810438377400741 0.9438714419765777 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 46142 6867 ITAPPGTAA True PC9_epitope_Rep6 797.42831837005 797.4272299358599 35.296 2 -0.4058338371537104 0.10810438377400741 0.9438714419765777 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 63676 11400 LPPPAARRPP True H1975_Epitope_Rep1 1070.6348975217 1070.6338099358602 48.83 2 -0.40583449512170905 0.10810438377400741 0.9438714419765777 ['nc|ENSG00000110076|P58401|NRXN2', 'ENST00000464307.5_1_11:64374670-64390737:-|nuORF', 'nc|ENSG00000110076|Q9P2S2-2|NRXN2', 'ENSG00000110076|ENST00000265459|NRXN2'] 131404 8049 VVTGLSSLHCH True H1975_Epitope_Rep1 1151.5757279630702 1151.57462993586 35.904 2 -0.4059006192282679 0.10810438377400741 0.9438714419765777 ['ENST00000435033.1_1_19:12491157-12492084:-|nuORF'] 112641 10145 TPEQIEKIY True H1975_Epitope_Rep2 1119.5811901829898 1119.58008993586 44.022 2 -0.40594488380553145 0.10810438377400741 0.9438714419765777 ['ENSG00000086288|ENST00000199447|NME8'] 36185 14871 GVFLYNKTKYD True H1975_Epitope_Rep1 1346.68705223386 1346.6859499358602 62.436 2 -0.4059552109363879 0.10810438377400741 0.9438714419765777 ['ENSG00000127526|ENST00000595753|SLC35E1', 'nc|ENSG00000127526|Q96K37-2|SLC35E1'] 125894 12830 VNTANLLE True PC9_epitope_Rep5 872.46034677432 872.45924993586 54.361 2 -0.40597217510473754 0.10813697120022048 0.9438714419765777 ['nc|ENSG00000182352|Q96MU5|CD300LD-AS1'] 58864 16868 LFSGFQEA True H1975_Epitope_Rep2 897.4232329896099 897.42212993586 70.129 2 -0.40604542646258907 0.10815233305200062 0.9438714419765777 ['ENSG00000129474|ENST00000262713|AJUBA', 'AJUBA|p.G32Rfs*10|1|0.57|ENSG00000129474|chr14:22982162-22982173|CTTGCCCGGCCC/G|frameshift_variant', 'ENST00000553911.1_2_14:23444960-23445931:-|nuORF'] 102503 21686 SPYLLSPTF True PC9_epitope_Rep2 1023.52769805815 1023.5271749679301 88.891 1 -0.40612138537315584 0.10818491852974611 0.9438714419765777 ['ENST00000420027.3_1_20:48698513-48698663:-|nuORF'] 63945 21485 LPYLETMFTL True PC9_epitope_Rep1 1226.62569784726 1226.62460993586 87.485 2 -0.4062060290857868 0.10820027902650751 0.9438714419765777 ['KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion', 'ENSG00000086200|ENST00000325324|IPO11', 'nc|ENSG00000086200|Q9UI26-2|IPO11'] 8433 11202 ATRWLRQYRPR True PC9_epitope_Rep1 1501.83784784489 1501.83619490379 47.97 3 -0.406228821294489 0.10821563899414399 0.9438714419765777 ['ENSG00000145217|ENST00000398516|SLC26A1', 'nc|ENSG00000145217|Q9H2B4-2|SLC26A1'] 87018 16973 QSCCALTGEGL True PC9_epitope_Rep1 1080.45798089916 1080.45688993586 70.11 2 -0.40625130503208606 0.10822913437360063 0.9438714419765777 ['ENSG00000165997|ENST00000377275|ARL5B'] 132567 23699 VYPLYTIVF True PC9_epitope_Rep5 1113.6110337592897 1113.60992993586 96.138 2 -0.40626951660056193 0.10822913437360063 0.9438714419765777 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 127310 8595 VQLVQDDP True H1975_Epitope_Rep3 912.4552613938799 912.45416993586 38.052 2 -0.40628470098032304 0.1082407646602945 0.9438714419765777 ['ENSG00000070476|ENST00000389709|ZXDC'] 18932 9712 ELEVECATQLR True H1975_Epitope_Rep1 1289.6285513815699 1289.62744993586 42.284 2 -0.40629099323878726 0.1082407646602945 0.9438714419765777 ['ENSG00000141682|ENST00000316660|PMAIP1'] 87664 11402 QVASVLTLL True NCI_RA007_Epitope_Rep3 942.57498260374 942.57388993586 51.972 2 -0.4063020832607815 0.1082407646602945 0.9438714419765777 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|367|2|anti-sense'] 57965 9478 LEQQVQFY True H1975_Epitope_Rep1 1053.5131106231697 1053.51200993586 41.375 2 -0.4063844476311318 0.1082640216286959 0.9438714419765777 ['ENSG00000130340|ENST00000392185|SNX9'] 36619 22581 GVLLIHPKTKD True NCI_RA007_Epitope_Rep2 1219.72885747619 1219.7277699358601 93.949 2 -0.4064065013745004 0.1082640216286959 0.9438714419765777 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'ENST00000496841.5_1_2:128393248-128394989:+|nuORF', 'ENST00000494959.1_1_2:128392149-128394989:+|nuORF', 'ENST00000491278.5_1_2:128392149-128394989:+|nuORF'] 71050 4922 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 24.059 2 -0.40640675831705525 0.1082640216286959 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 99812 5054 SLGSRTSASSP True NCI_RA007_Epitope_Rep3 1048.51490152832 1048.51380993586 26.875 2 -0.4064254153383561 0.1082640216286959 0.9438714419765777 ['PODXL2|p.P325S|1|0.3|ENSG00000114631|chr3:127661001-127661001|C/T|missense_variant'] 140249 13528 YWRRREEEERW True NCI_RA007_Epitope_Rep2 1693.80733556225 1693.8056849037903 57.262 3 -0.40643545902158457 0.1082640216286959 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR'] 114935 9376 TTFQQKIKDK True PC9_epitope_Rep5 1235.68738658703 1235.68573490379 41.02 3 -0.4064531275676792 0.1082640216286959 0.9438714419765777 ['nc|ENSG00000163576|Q8N7U6-2|EFHB', 'ENST00000498089.1_1_3:19936277-19975510:-|nuORF', 'nc|ENSG00000163576|Q8N7U6-3|EFHB', 'ENSG00000163576|ENST00000295824|EFHB'] 45537 9231 ISFTCRFL True PC9_epitope_Rep6 985.50552314493 985.50442993586 45.652 2 -0.40647755450195155 0.10827937732470037 0.9438714419765777 ['ENSG00000189077|ENST00000493111|TMEM120A', 'nc|ENSG00000189077|Q9BXJ8-2|TMEM120A'] 25407 16181 FEKERYREWER True H1975_Epitope_Rep1 1626.7902885157798 1626.7891899358601 67.586 2 -0.40651940174074186 0.1082947324918637 0.9438714419765777 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 133773 10535 WLNGRMPKRW True PC9_epitope_Rep1 1342.7080795452998 1342.70644490379 45.414 3 -0.40661470125084365 0.10835801363730284 0.9438714419765777 ['ENST00000502841.5_1_4:40829169-40832532:-|nuORF'] 2939 4980 AFGDTKFS True NCI_RA007_Epitope_Rep2 871.40758292547 871.40648993586 23.994 2 -0.4066464136788256 0.10835801363730284 0.9438714419765777 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'TRIM28|p.V808L|1|0.24|ENSG00000130726|chr19:58550467-58550467|G/T|missense_variant', 'ENST00000598355.1_1_19:59061017-59061917:+|nuORF'] 84395 5988 QGENIDKLT True PC9_epitope_Rep3 1016.51383889916 1016.51274993586 28.086 2 -0.40665705484270753 0.10835801363730284 0.9438714419765777 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 54500 6297 LAADPSHP True NCI_RA007_Epitope_Rep3 806.3922672145 806.39116993586 31.771 2 -0.4066742178844523 0.10837336639289219 0.9438714419765777 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 83469 9800 QDFFDTNAY True H1975_Epitope_Rep1 1119.45090428943 1119.44980993586 42.624 2 -0.40671151272704736 0.10840593684355522 0.9438714419765777 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.Q2344Kfs*48|2|0.43|ENSG00000091656|chr8:76853949-76853949|C/-|frameshift_variant', 'ZFHX4|p.P2910Qfs*27|1|0.24|ENSG00000091656|chr8:76855647-76855647|C/-|frameshift_variant', 'ZFHX4|p.A2982Qfs*10|1|0.33|ENSG00000091656|chr8:76855863-76855863|G/-|frameshift_variant', 'ZFHX4|p.P2251T|1|0.12|ENSG00000091656|chr8:76853672-76853672|C/A|missense_variant'] 41108 15860 HYMPPPYASL True PC9_epitope_Rep4 1174.5481162328997 1174.5470099358602 68.937 2 -0.406851296233376 0.10845572409993286 0.9438714419765777 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 38950 2625 HIRRRLIQRR True NCI_RA007_Epitope_Rep4 1402.88580109682 1402.8847099358602 14.72 2 -0.4068577237732531 0.10847107438016529 0.9438714419765777 ['ENSG00000214929|ENST00000344803|SPATA31D1'] 55143 5432 LAMVFMGAK True NCI_RA007_Epitope_Rep3 966.5030806167798 966.50198993586 28.378 2 -0.4069229820913437 0.10852085880064048 0.9438714419765777 ['ENSG00000166401|ENST00000397985|SERPINB8', 'nc|ENSG00000166401|P50452-2|SERPINB8', 'ENSG00000221887|ENST00000408945|HMSD'] 98207 18400 SIDYGFISAI True PC9_epitope_Rep5 1084.54407639828 1084.5429699358601 75.794 2 -0.4069358723515967 0.10853433879104041 0.9438714419765777 ['ENSG00000164841|ENST00000297459|TMEM74'] 45816 12325 ISPKGVDIV True PC9_epitope_Rep2 926.54368247546 926.54258993586 52.721 2 -0.4069447780121795 0.10853433879104041 0.9438714419765777 ['nc|ENSG00000108828|Q99536-2|VAT1', 'nc|ENSG00000108828|Q99536-3|VAT1', 'ENSG00000108828|ENST00000355653|VAT1'] 11026 18448 DDIVGFSGDF True PC9_epitope_Rep4 1070.4556553167001 1070.45454993586 79.031 2 -0.40696613365718004 0.10856316496229729 0.9438714419765777 ['ENSG00000107742|ENST00000373109|SPOCK2'] 26853 10266 FLETRKSWRK True NCI_RA007_Epitope_Rep2 1349.7568035595298 1349.75515490379 44.524 3 -0.40698591471555295 0.10856316496229729 0.9438714419765777 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 80946 15890 PMTQAALGE True PC9_epitope_Rep5 916.4324177743199 916.4318649679301 66.111 1 -0.4070293389625768 0.10856316496229729 0.9438714419765777 ['ENSG00000100625|ENST00000216513|SIX4'] 133104 16472 WARWLWRRLFK True PC9_epitope_Rep4 1616.9204552700396 1616.9188049037903 71.332 3 -0.40734068656453565 0.10869902043486494 0.9438714419765777 ['ENST00000491791.1_1_3:49377935-49378118:-|nuORF'] 56185 7268 LDPALTLYSAP True H1975_Epitope_Rep3 1159.61249031127 1159.6113899358602 32.929 2 -0.4073947108302326 0.10871436441261534 0.9438714419765777 ['ENST00000429683.1_1_22:32021901-32028265:-|nuORF'] 131965 14379 VYGDFQEAF True NCI_RA007_Epitope_Rep4 1074.4658260775798 1074.46472993586 62.617 2 -0.4075193548714156 0.10876413778856582 0.9438714419765777 ['nc|ENSG00000112773|Q96IP4-2|TENT5A', 'ENSG00000112773|ENST00000320172|TENT5A'] 5124 15300 ALMLWRLHWRR True NCI_RA007_Epitope_Rep2 1536.86122614176 1536.8601299358602 64.207 2 -0.4075723710065823 0.10879107637753258 0.9438714419765777 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1', 'ENST00000465966.4_1_6:30861134-30864801:+|nuORF'] 26591 15240 FKDRHWLFTEF True PC9_epitope_Rep1 1524.7513838259194 1524.74974490379 63.44 3 -0.40757407012203584 0.10879107637753258 0.9438714419765777 ['nc|ENSG00000165055|Q6P1Q9-2|METTL2B', 'ENST00000482555.5_1_7:128117100-128141967:+|nuORF', 'ENST00000333483.14_1_17:60501544-60526087:+|nuORF', 'ENSG00000165055|ENST00000262432|METTL2B', 'ENSG00000087995|ENST00000311506|METTL2A', 'METTL2A|p.R295Afs*21|1|0.33|ENSG00000087995|chr17:62444909-62444909|C/-|frameshift_variant'] 85759 20363 QLVPEAPRRVT True PC9_epitope_Rep6 1264.7251690780797 1264.7240699358601 91.024 2 -0.4075854173233155 0.10879107637753258 0.9438714419765777 ['TSKS|p.C449Wfs*119|1|0.13|ENSG00000126467|chr19:49744245-49744246|-/C|frameshift_variant', 'ENSG00000126467|ENST00000246801|TSKS'] 22036 17676 ESQRVVLQL True PC9_epitope_Rep3 1070.6084079903399 1070.60730993586 73.186 2 -0.4075908369657671 0.10879107637753258 0.9438714419765777 ['nc|ENSG00000127946|O00291-3|HIP1', 'ENSG00000127946|ENST00000336926|HIP1', 'nc|ENSG00000127946|O00291-4|HIP1'] 80748 14949 PLRRFFTRNYF True PC9_epitope_Rep5 1515.8099017615498 1515.8082449037902 62.503 3 -0.4076126941729989 0.10880641718594003 0.9438714419765777 ['ENST00000532226.1_1_6:111804740-111812267:+|nuORF'] 31990 12052 GETIFVTA True NCI_RA007_Epitope_Rep5 836.42798401688 836.42688993586 53.016 2 -0.40767321176142035 0.10882175746621912 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|1|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|14|fusion', 'ENST00000472129.3_1_17:57725612-57733400:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'CLTC-VMP1|20|fusion'] 1570 6281 AEFAEVSK True PC9_epitope_Rep3 879.43379767331 879.43270993586 29.193 2 -0.4078598484982187 0.10890407422069986 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-2|ALB'] 103364 8799 SQVNATACAVP True H1975_Epitope_Rep1 1059.5018943164698 1059.5007899358602 38.771 2 -0.40790166603943456 0.10890407422069986 0.9438714419765777 ['ENST00000594259.1_1_19:39406248-39406585:-|nuORF'] 115366 16010 TVEIDNPEL True PC9_epitope_Rep5 1028.5026055091198 1028.5015099358602 66.573 2 -0.40796102799351974 0.10893662432441736 0.9438714419765777 ['ENSG00000131697|ENST00000378156|NPHP4', 'ENST00000489180.6_1_1:5923327-5936049:-|nuORF'] 109758 18423 THIILDNADVL True PC9_epitope_Rep4 1222.65575210558 1222.65464993586 78.932 2 -0.4080903065271363 0.10900172117039587 0.9438714419765777 ['ENSG00000102699|ENST00000381989|PARP4'] 264 4945 AAGPPVEERFR True PC9_epitope_Rep2 1227.63601972051 1227.6343649037901 24.383 3 -0.40811169697953836 0.10900172117039587 0.9438714419765777 ['nc|ENSG00000149091|Q13574-3|DGKZ'] 134546 4410 WVLKRKKKLKK True NCI_RA007_Epitope_Rep1 1453.9973086084094 1453.9962099358602 21.267 2 -0.40813945106350535 0.10901705650505154 0.9438714419765777 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 2281 4739 AEPMGQQYYPD True H1975_Epitope_Rep2 1297.52850298713 1297.52686490379 23.32 3 -0.40816443957058113 0.10904772559076123 0.9438714419765777 ['nc|ENSG00000184402|O75177-2|SS18L1', 'ENSG00000184402|ENST00000331758|SS18L1', 'nc|ENSG00000184402|O75177-5|SS18L1', 'nc|ENSG00000184402|O75177-4|SS18L1', 'nc|ENSG00000184402|O75177-3|SS18L1'] 40759 12764 HVANIVEKL True PC9_epitope_Rep5 1021.59202965021 1021.59092993586 54.105 2 -0.4082752614489516 0.10904772559076123 0.9438714419765777 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 100054 15191 SLKNHDHPV True PC9_epitope_Rep4 1045.5304920228102 1045.52938993586 66.355 2 -0.40833806046143684 0.10907839256518372 0.9438714419765777 ['ENSG00000196208|ENST00000381486|GREB1', 'nc|ENSG00000196208|Q4ZG55-4|GREB1'] 8377 5581 ATNRPDAL True PC9_epitope_Rep1 856.4402800360799 856.43918993586 26.297 2 -0.4083418802027358 0.10907839256518372 0.9438714419765777 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 32871 20811 GILGNGLVI True PC9_epitope_Rep4 854.5225531080599 854.52200496793 88.2 1 -0.4083728406848468 0.10909372526073038 0.9438714419765777 ['nc|ENSG00000174600|Q99788-2|CMKLR1', 'ENSG00000174600|ENST00000550402|CMKLR1'] 101892 11940 SPLHLAVEA True PC9_epitope_Rep6 935.5076313199099 935.50652993586 57.172 2 -0.4084018711309736 0.10914347668955547 0.9438714419765777 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 56410 7257 LDSEYKEGGQR True NCI_RA007_Epitope_Rep1 1280.5996937814398 1280.59804490379 32.218 3 -0.4085189701882859 0.10919134729559965 0.9438714419765777 ['nc|ENSG00000139291|Q96HH6-2|TMEM19', 'ENSG00000139291|ENST00000266673|TMEM19'] 41665 7071 IDKLEERFR True H1975_Epitope_Rep3 1204.6564208119198 1204.6553299358602 32.166 2 -0.4085535945348344 0.10919134729559965 0.9438714419765777 ['ENSG00000149679|ENST00000279101|CABLES2'] 18434 20025 EKGPIVPEI True PC9_epitope_Rep5 980.5542471591599 980.55314993586 82.079 2 -0.4085997278235127 0.10920291850220264 0.9438714419765777 ['ENSG00000149256|ENST00000278550|TENM4'] 9770 11504 AYLEAYKEF True NCI_RA007_Epitope_Rep4 1132.54407639828 1132.5429699358601 51.188 2 -0.4086398950428417 0.10920291850220264 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 83956 8581 QELETERRVK True H1975_Epitope_Rep1 1286.69426287262 1286.6931699358602 37.933 2 -0.4086915674875882 0.10920291850220264 0.9438714419765777 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1', 'ENST00000462441.1_1_2:63101526-63108832:+|nuORF', 'EHBP1-COMMD1|5|fusion', 'EHBP1-COMMD1|6|fusion', 'EHBP1-VAV2|2|fusion', 'EHBP1-VAV2|4|fusion', 'EHBP1-VAV2|1|fusion', 'EHBP1-VAV2|3|fusion'] 82963 18666 PWWQWLKWRRL True PC9_epitope_Rep5 1653.90447085273 1653.9033699358602 76.822 2 -0.40872652443592916 0.10921636782875038 0.9438714419765777 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 3757 9888 AGTLIAKV True PC9_epitope_Rep5 771.48543932335 771.48434993586 43.005 2 -0.4087404382234383 0.10921636782875038 0.9438714419765777 ['ENST00000587602.5_1_19:1073185-1086002:+|nuORF', 'ENSG00000180448|ENST00000313093|ARHGAP45', 'nc|ENSG00000180448|Q92619-2|ARHGAP45'] 46968 7703 IVNLIRNARL True NCI_RA007_Epitope_Rep2 1180.7404252193999 1180.73932993586 34.588 2 -0.4089115947786535 0.10928331756001032 0.9438714419765777 ['ENSG00000104408|ENST00000220849|EIF3E'] 20304 6182 EPDDHEKRIP True H1975_Epitope_Rep1 1234.59421447818 1234.5931099358602 28.848 2 -0.40895441680056904 0.10931208919783889 0.9438714419765777 ['ENSG00000005436|ENST00000321027|GCFC2', 'nc|ENSG00000005436|P16383-3|GCFC2', 'nc|ENSG00000005436|P16383-4|GCFC2'] 29047 9362 FTMFNRRHHCR True NCI_RA007_Epitope_Rep1 1503.7088249046299 1503.70772993586 40.409 2 -0.40897514662917195 0.10931208919783889 0.9438714419765777 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF'] 46550 9435 ITQVKSKHLKD True NCI_RA007_Epitope_Rep2 1295.7561348531897 1295.7550299358602 41.311 2 -0.4089986796554592 0.10931208919783889 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 56044 8640 LDKRGSHKEYK True NCI_RA007_Epitope_Rep2 1359.72589735407 1359.72480993586 38.254 2 -0.409011492189444 0.10934273916035787 0.9438714419765777 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'ENST00000531732.5_1_11:12183702-12229694:+|nuORF', 'nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 117393 13327 VADDLTQNT True PC9_epitope_Rep1 975.4509042894301 975.44980993586 56.122 2 -0.4090152670509876 0.10934273916035787 0.9438714419765777 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 8522 4304 ATVSSADGKPP True H1975_Epitope_Rep2 1028.5138388991597 1028.51274993586 21.667 2 -0.40904316845745736 0.10935806335059617 0.9438714419765777 ['ENSG00000168348|ENST00000307169|INSM2'] 12310 15853 DITKEEADVI True PC9_epitope_Rep3 1131.5659340416698 1131.5648299358602 66.129 2 -0.40914418229827915 0.10937338701352328 0.9438714419765777 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'nc|ENSG00000173193|Q460N5-5|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 85071 16044 QINEKITV True PC9_epitope_Rep6 943.5338460677499 943.53274993586 74.038 2 -0.40923754234857135 0.10940591504223801 0.9438714419765777 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'RALGAPA1|p.C1295Lfs*2|1|0.4|ENSG00000174373|chr14:35655901-35655902|-/A|frameshift_variant'] 70703 9378 MDPFNHRIF True NCI_RA007_Epitope_Rep4 1175.5545985956699 1175.5535099358601 42.927 2 -0.40928030266852533 0.10943844195168949 0.9438714419765777 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 13218 8001 DLTPGSVEEA True NCI_RA007_Epitope_Rep1 1016.4662200004 1016.46512993586 35.116 2 -0.40938835532263684 0.10948628840794136 0.9438714419765777 ['nc|ENSG00000155256|Q5T4F4-4|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-8|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-2|ZFYVE27', 'ENSG00000155256|ENST00000684270|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-3|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-6|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-7|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-5|ZFYVE27'] 60514 13002 LINYDKEHIP True PC9_epitope_Rep4 1240.6451874218799 1240.6435349037902 57.908 3 -0.4093992377813117 0.10948628840794136 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11'] 74627 9094 NLEETLLLHEK True H1975_Epitope_Rep1 1337.7190806381298 1337.71798993586 39.884 2 -0.4094674794665179 0.10951692815854666 0.9438714419765777 ['ENSG00000188991|ENST00000344941|SLC15A5'] 56045 6852 LDKRRESK True NCI_RA007_Epitope_Rep4 1030.5883412520998 1030.5872499358602 32.977 2 -0.4094925264624 0.10951692815854666 0.9438714419765777 ['ENST00000309964.8_1_4:56300945-56301062:-|nuORF'] 11848 4733 DHNDGLGNAF True NCI_RA007_Epitope_Rep1 1058.44173658806 1058.4406299358602 22.491 2 -0.40953824450745807 0.10954945036040531 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 4504 12764 AKKRVIVKKLP True PC9_epitope_Rep2 1278.8863611770998 1278.8847149037902 54.403 3 -0.40960650768547013 0.10956476862205401 0.9438714419765777 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 125350 9647 VLSLLGSGLP True H1975_Epitope_Rep1 954.57498260374 954.57388993586 42.036 2 -0.4097372465954126 0.10964889645800004 0.9438714419765777 ['ENST00000377716.6_1_9:37903591-37903951:-|nuORF'] 90099 5697 RGREKRWQERE True H1975_Epitope_Rep1 1528.79710523172 1528.79545490379 26.98 3 -0.4097743334895646 0.10965855336716264 0.9438714419765777 ['ENSG00000184209|ENST00000526639|SNRNP35', 'nc|ENSG00000184209|Q16560-2|SNRNP35'] 79898 12231 PILYSFYLDKK True NCI_RA007_Epitope_Rep2 1385.7594888981296 1385.7583899358601 52.174 2 -0.4098107329136013 0.10965855336716264 0.9438714419765777 ['FCRL6|p.E245K|1|0.49|ENSG00000181036|chr1:159809530-159809530|G/A|missense_variant'] 126548 6306 VPPFLKGVP True H1975_Epitope_Rep3 952.5745886809199 952.57348993586 29.261 2 -0.4098156742180731 0.10965855336716264 0.9438714419765777 ['ENST00000368321.7_1_1:155883759-155883837:-|nuORF'] 111640 15388 TLNSSQEKLF True PC9_epitope_Rep5 1165.59790287629 1165.5962549037902 64.198 3 -0.40984067286225206 0.10965855336716264 0.9438714419765777 ['nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B', 'nc|ENSG00000138182|Q96Q89-4|KIF20B'] 12682 12894 DLETSKYIL True PC9_epitope_Rep4 1080.5702911461199 1080.56918993586 57.475 2 -0.40989446947988484 0.10967386817118481 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'KDM3B|p.A1619Rfs*25|1|0.09|ENSG00000120733|chr5:138429926-138429927|-/C|frameshift_variant', 'KDM3B|p.I982M|1|0.37|ENSG00000120733|chr5:138398292-138398292|A/G|missense_variant'] 135047 11448 YAIVRFNQYFK True H1975_Epitope_Rep1 1447.7612202336297 1447.76012993586 49.015 2 -0.4100133886190418 0.10973889710688361 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 64627 5724 LRFCYYAS True PC9_epitope_Rep4 1021.4691376362099 1021.46804993586 28.843 2 -0.4100353245249863 0.10973889710688361 0.9438714419765777 ['ENSG00000179455|ENST00000314520|MKRN3', 'ENST00000568945.2_1_15:23811631-23811987:+|nuORF'] 98162 18072 SIDEHFQP True PC9_epitope_Rep3 971.4348603024698 971.43376993586 74.71 2 -0.4100622668741661 0.1097542097387296 0.9438714419765777 ['ENSG00000087263|ENST00000566157|OGFOD1', 'nc|ENSG00000087263|Q8N543-2|OGFOD1'] 139240 9262 YTAHVGYSMY True H1975_Epitope_Rep2 1190.50664534374 1190.50554993586 40.584 2 -0.4101820514224806 0.10981923255533961 0.9438714419765777 ['ENSG00000163132|ENST00000382723|MSX1'] 19330 12430 ELNAEIVLNSA True H1975_Epitope_Rep1 1171.60846755999 1171.60736993586 52.848 2 -0.41020341610738426 0.10981923255533961 0.9438714419765777 ['CFAP58|p.V73L|2|0.23|ENSG00000120051|chr10:104358548-104358548|G/T|missense_variant'] 12329 4292 DIVEC[Carbamidomethyl]LAEHG True NCI_RA007_Epitope_Rep2 1141.5073738991598 1141.50626993586 21.333 2 -0.4102272985034124 0.10983454301537615 0.9438714419765777 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'nc|ENSG00000196730|P53355-2|DAPK1', 'ENST00000495281.1_1_9:90263689-90265069:+|nuORF'] 120568 15217 VGAEDHLLL True PC9_epitope_Rep2 965.51819600361 965.51708993586 63.796 2 -0.41024541031311107 0.10984229624916161 0.9438714419765777 ['ENST00000397861.6_1_17:54910427-54911098:-|nuORF'] 43153 14460 IGRFLPASP True PC9_epitope_Rep5 956.5443511817998 956.54324993586 60.62 2 -0.4103449629052899 0.10984229624916161 0.9438714419765777 ['ENSG00000146263|ENST00000683635|MMS22L'] 110991 10299 TLDEEDSEGP True PC9_epitope_Rep2 1090.4302284144999 1090.4291299358601 44.944 2 -0.4103695793131063 0.10984229624916161 0.9438714419765777 ['nc|ENSG00000184588|Q07343-4|PDE4B', 'nc|ENSG00000184588|Q07343-2|PDE4B', 'nc|ENSG00000184588|Q07343-3|PDE4B', 'ENSG00000184588|ENST00000341517|PDE4B'] 62604 13311 LLVGNKSI True PC9_epitope_Rep1 842.52255310806 842.52144993586 56.063 2 -0.41037209829382393 0.10984229624916161 0.9438714419765777 ['nc|ENSG00000117322|P20023-4|CR2', 'ENSG00000117322|ENST00000367057|CR2'] 72861 18164 NAPKALIV True PC9_epitope_Rep4 824.51198842436 824.51088993586 77.933 2 -0.41038306158083926 0.10984229624916161 0.9438714419765777 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 18085 16326 EIKKVFASLP True PC9_epitope_Rep2 1130.6699456177398 1130.6688499358602 68.044 2 -0.4104020975293626 0.10985193719798456 0.9438714419765777 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'WDR1|p.Y300Tfs*27|1|0.41|ENSG00000071127|chr4:10087761-10087761|C/-|frameshift_variant', 'ENST00000509600.1_1_4:10117520-10118290:-|nuORF'] 101179 11893 SLVSRLLAQGP True PC9_epitope_Rep1 1139.6662572196299 1139.6651699358601 50.613 2 -0.4104139209110823 0.10985193719798456 0.9438714419765777 ['ENSG00000204653|ENST00000389208|ASPDH'] 27449 16985 FNPDAQVFVP True H1975_Epitope_Rep2 1132.55530978832 1132.5542099358602 70.58 2 -0.41045609032817776 0.10985193719798456 0.9438714419765777 ['nc|ENSG00000183864|Q14106-2|TOB2', 'ENSG00000183864|ENST00000327492|TOB2'] 71039 4673 MESRPPPPP True H1975_Epitope_Rep2 1006.4906013567798 1006.48950993586 23.07 2 -0.41047095175688453 0.10985193719798456 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 133391 10277 WFREFWEQRFR True NCI_RA007_Epitope_Rep1 1685.82152907441 1685.81989490379 43.983 3 -0.4105740185883628 0.10989785741307563 0.9438714419765777 ['ENSG00000164082|ENST00000395052|GRM2'] 110964 11871 TLDAQDVLA True H1975_Epitope_Rep2 944.4814761417199 944.48092496793 50.74 1 -0.4105806691738021 0.10989785741307563 0.9438714419765777 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 79606 11112 PGWQRARPLG True NCI_RA007_Epitope_Rep4 1136.6203100867199 1136.61920993586 49.618 2 -0.41058076272816796 0.10989785741307563 0.9438714419765777 ['ENST00000524189.5_1_8:28925998-28926520:-|nuORF'] 9201 20569 AVPEVAVYL True PC9_epitope_Rep4 959.5327834385898 959.53168993586 87.27 2 -0.41059509286641194 0.10991316309861576 0.9438714419765777 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 15951 19941 EDTLYQGLP True PC9_epitope_Rep3 1034.49204082542 1034.49147496793 81.947 1 -0.41062388277813694 0.10993999209064804 0.9438714419765777 ['ENSG00000171017|ENST00000306708|LRRC8E'] 100377 5039 SLNKTDVI True NCI_RA007_Epitope_Rep3 888.4916469025999 888.49054993586 26.816 2 -0.4106346839193465 0.10993999209064804 0.9438714419765777 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'TRPM1|p.S1552Vfs*9|1|0.19|ENSG00000134160|chr15:31001980-31001980|T/-|frameshift_variant', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1'] 55680 22828 LDAYSTLIF True PC9_epitope_Rep4 1041.53826274185 1041.53767496793 96.032 1 -0.4106453609509245 0.10993999209064804 0.9438714419765777 ['ENST00000374994.8_2_9:101912450-101912660:+|nuORF'] 20369 16205 EPIPYEFMA True NCI_RA007_Epitope_Rep4 1095.49468367771 1095.4935899358602 70.272 2 -0.41072889224036063 0.10993999209064804 0.9438714419765777 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 84209 7715 QETQNKDINQ True H1975_Epitope_Rep1 1216.5683936531598 1216.5672899358601 34.638 2 -0.41078545791806076 0.10997059885490278 0.9438714419765777 ['nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1', 'ENSG00000108175|ENST00000334512|ZMIZ1', 'ZMIZ1|p.D570Wfs*35|1|0.51|ENSG00000108175|chr10:79299089-79299090|GG/-|frameshift_variant', 'ENST00000478357.1_1_10:81036939-81053539:+|nuORF'] 20864 8599 EQRERENEAK True NCI_RA007_Epitope_Rep1 1287.61674082791 1287.6156499358601 37.449 2 -0.41081355219614596 0.10997059885490278 0.9438714419765777 ['nc|ENSG00000147439|Q9NQY0-2|BIN3', 'ENSG00000147439|ENST00000276416|BIN3'] 104684 6535 STAILYSP True NCI_RA007_Epitope_Rep1 850.44363408102 850.44252993586 29.433 2 -0.4108362240921877 0.10998211952410426 0.9438714419765777 ['ENST00000369851.5_1_1:110116570-110116612:+|nuORF'] 36332 19540 GVGWTLLL True H1975_Epitope_Rep2 857.5010893874899 857.5005449679301 81.087 1 -0.41086440282421377 0.10998211952410426 0.9438714419765777 ['ENST00000577830.5_2_17:55938859-55939276:-|nuORF'] 120826 7835 VGDKLNVI True NCI_RA007_Epitope_Rep4 856.50181766348 856.50072993586 36.836 2 -0.4109772825307974 0.10998211952410426 0.9438714419765777 ['ENSG00000121691|ENST00000241052|CAT'] 22949 17564 EVHKWNLV True PC9_epitope_Rep3 1023.5501648382299 1023.5490699358601 72.746 2 -0.411020265393567 0.10999363900493407 0.9438714419765777 ['ENSG00000203697|ENST00000366872|CAPN8'] 4506 11662 AKKRVIVKKLP True PC9_epitope_Rep3 1278.8863611770998 1278.8847149037902 49.877 3 -0.41104217421194833 0.10999363900493407 0.9438714419765777 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 51864 9394 KKMMERLHK True NCI_RA007_Epitope_Rep1 1199.6631034988297 1199.6620099358602 40.533 2 -0.4110897689261278 0.10999363900493407 0.9438714419765777 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant'] 45432 20627 ISDVVNYFLSV True PC9_epitope_Rep2 1254.64960409598 1254.6485099358601 84.775 2 -0.4111269085796631 0.1100089396231605 0.9438714419765777 ['ENST00000368468.3_1_6:119499937-119500069:-|nuORF'] 90629 25077 RKKKRCRL True NCI_RA007_Epitope_Rep1 1086.6920355583397 1086.6909299358601 103.78 2 -0.41121781772602584 0.11003008165019339 0.9438714419765777 ['ENST00000494268.1_1_X:11778342-11782058:+|nuORF', 'ENST00000478462.5_1_X:11777869-11779061:+|nuORF', 'MSL3|p.L292Qfs*23|1|0.37|ENSG00000005302|chrX:11763904-11763907|CTTC/-|frameshift_variant', 'nc|ENSG00000005302|Q8N5Y2-5|MSL3', 'nc|ENSG00000005302|Q8N5Y2-2|MSL3', 'nc|ENSG00000005302|Q8N5Y2-3|MSL3', 'ENSG00000005302|ENST00000312196|MSL3'] 80293 13100 PLEKHYSVV True H1975_Epitope_Rep3 1070.5760452329 1070.57494993586 55.634 2 -0.4112213169174968 0.11003008165019339 0.9438714419765777 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1'] 117903 11729 VAQKQREREER True PC9_epitope_Rep3 1427.7593227406699 1427.75767490379 50.135 3 -0.4112295388985782 0.11003008165019339 0.9438714419765777 ['ENSG00000162191|ENST00000301935|UBXN1', 'ENST00000532904.5_1_11:62445243-62446247:-|nuORF', 'ENST00000533908.5_1_11:62445382-62446470:-|nuORF', 'ENST00000525717.5_1_11:62445243-62446470:-|nuORF', 'ENST00000524762.5_1_11:62445008-62446470:-|nuORF', 'nc|ENSG00000162191|Q04323-2|UBXN1'] 86221 22229 QPYGGFLDI True PC9_epitope_Rep1 1008.4916469025999 1008.4910749679301 90.326 1 -0.4112416210538091 0.11003008165019339 0.9438714419765777 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant', 'ENST00000504435.1_1_4:882633-887812:-|nuORF'] 38267 13897 HFEVAELL True PC9_epitope_Rep4 956.4967322830398 956.49562993586 61.355 2 -0.41125813117153276 0.11003008165019339 0.9438714419765777 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'ENST00000497613.2_1_8:145658938-145666334:-|nuORF'] 27128 9497 FLQVTATDA True PC9_epitope_Rep5 964.48656152216 964.48546993586 41.486 2 -0.4112587097140427 0.11003008165019339 0.9438714419765777 ['ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant'] 102795 10250 SQFFENGDVP True H1975_Epitope_Rep3 1138.4931034545798 1138.49200993586 44.475 2 -0.41126264647587096 0.11003008165019339 0.9438714419765777 ['ENSG00000204920|ENST00000270014|ZNF155', 'nc|ENSG00000204920|Q12901-2|ZNF155'] 85837 16964 QMPTVHYEF True PC9_epitope_Rep2 1150.5117307241799 1150.5106299358602 70.5 2 -0.4112997685206154 0.11004537953795379 0.9438714419765777 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A'] 78481 20968 PDDYKFSV True PC9_epitope_Rep5 969.4443623570099 969.44326993586 85.714 2 -0.4113954719461672 0.1100759737357764 0.9438714419765777 ['nc|nan|Q8ND61-2|C3orf20', 'ENSG00000131379|ENST00000253697|C3orf20'] 58152 10966 LESFQLWIAFP True H1975_Epitope_Rep2 1349.7019740220098 1349.70086993586 47.21 2 -0.4114576204215426 0.1100759737357764 0.9438714419765777 ['ENSG00000279270|ENST00000624978|OR52R1'] 64812 11737 LSAAWRRFE True PC9_epitope_Rep4 1134.5934266325398 1134.59232993586 52.907 2 -0.4114593360645457 0.11008937779305604 0.9438714419765777 ['ENST00000470046.1_1_22:50881704-50882673:+|nuORF'] 71045 4441 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 22.205 2 -0.41148063508175764 0.11008937779305604 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 62272 10392 LLQKGPAP True PC9_epitope_Rep1 822.4963383602199 822.49524993586 44.857 2 -0.4115116708928113 0.1101027809288096 0.9438714419765777 ['nc|ENSG00000000460|Q9NSG2-3|FIRRM', 'nc|ENSG00000000460|Q9NSG2-2|FIRRM', 'ENSG00000000460|ENST00000359326|C1orf112'] 38096 4396 HENNNGQAAF True NCI_RA007_Epitope_Rep5 1100.4635346618 1100.4624299358602 23.537 2 -0.41153917449369337 0.1101027809288096 0.9438714419765777 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 39337 7032 HLSPASSQV True PC9_epitope_Rep5 924.46649478392 924.46538993586 32.017 2 -0.41156089571695503 0.11013336999862505 0.9438714419765777 ['ENST00000474945.1_1_3:52740888-52741806:+|nuORF'] 110508 9422 TIQEYQSLK True H1975_Epitope_Rep1 1108.5764391557198 1108.57534993586 41.154 2 -0.4116276667014747 0.11013336999862505 0.9438714419765777 ['nc|ENSG00000176438|Q6ZMZ3-2|SYNE3', 'ENSG00000176438|ENST00000682763|SYNE3', 'nc|ENSG00000176438|Q6ZMZ3-3|SYNE3'] 18824 9863 ELEEALNFIN True NCI_RA007_Epitope_Rep1 1190.5819184589798 1190.58082993586 42.367 2 -0.41162975557110365 0.1101448777218279 0.9438714419765777 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 18648 10444 ELASWVRRPG True H1975_Epitope_Rep1 1169.63054041725 1169.62944993586 45.127 2 -0.4116692918361688 0.1101448777218279 0.9438714419765777 ['ENSG00000250799|ENST00000653904|PRODH2'] 68619 10141 LVAASQAALG True PC9_epitope_Rep6 899.5076313199099 899.50652993586 49.627 2 -0.4116943775071602 0.1101448777218279 0.9438714419765777 ['ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 64322 15956 LQNAGLVTV True H1975_Epitope_Rep1 913.52328138405 913.5227349679301 66.688 1 -0.41172054426941235 0.11015259829529832 0.9438714419765777 ['ENSG00000009765|ENST00000344419|IYD', 'ERICH1-IYD|3|fusion'] 117836 8644 VAPASLATPSP True H1975_Epitope_Rep1 1009.54441075145 1009.54330993586 38.178 2 -0.4117345280658902 0.11015259829529832 0.9438714419765777 ['ENST00000462534.5_1_2:220415559-220417014:-|nuORF'] 70430 15891 LYRKMRLR True PC9_epitope_Rep3 1134.6808021682998 1134.67915490379 66.273 3 -0.4117386533918271 0.11015259829529832 0.9438714419765777 ['ENSG00000197943|ENST00000564138|PLCG2', 'ENST00000567980.5_1_16:81819579-81955027:+|nuORF', 'PLCG2|p.S821Ifs*21|1|0.26|ENSG00000197943|chr16:81927118-81927119|-/T|frameshift_variant'] 23069 4916 EVLEENEQR True NCI_RA007_Epitope_Rep2 1144.53603089572 1144.5349299358602 23.742 2 -0.4117525707074244 0.11015259829529832 0.9438714419765777 ['ENSG00000197651|ENST00000358859|CCER1'] 43589 15572 IIGEHIVTG True PC9_epitope_Rep2 937.5232813840499 937.52218993586 65.173 2 -0.4117541060692863 0.11015259829529832 0.9438714419765777 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1'] 101680 16723 SPFTVGVAA True PC9_epitope_Rep4 847.4439684341899 847.44341496793 72.293 1 -0.41182399811287557 0.1102309437074713 0.9438714419765777 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 46138 7250 ITAPPGTAA True PC9_epitope_Rep4 797.42831837005 797.4272299358599 35.197 2 -0.41183463154042793 0.1102309437074713 0.9438714419765777 ['ENSG00000137038|ENST00000358227|DMAC1', 'nc|ENSG00000137038|Q96GE9|DMAC1'] 133300 9732 WEPSHTGYQ True H1975_Epitope_Rep2 1103.4672230599099 1103.4661299358602 42.42 2 -0.41184050868739036 0.1102309437074713 0.9438714419765777 ['ENST00000267406.10_1_14:24897604-24898679:-|nuORF'] 120029 16262 VFDYEAAG True PC9_epitope_Rep3 870.3759484440199 870.3753949679301 67.689 1 -0.4118470240277923 0.1102309437074713 0.9438714419765777 ['ENSG00000130758|ENST00000253055|MAP3K10'] 100403 13719 SLNRYFIKV True PC9_epitope_Rep4 1138.6498788795 1138.6482449037899 60.66 3 -0.41188158135090125 0.11027870373552356 0.9438714419765777 ['ENSG00000164916|ENST00000328914|FOXK1', 'nc|ENSG00000164916|P85037-2|FOXK1', 'ENSG00000141568|ENST00000335255|FOXK2', 'nc|ENSG00000141568|Q01167-2|FOXK2'] 126262 11176 VPHLLTEA True PC9_epitope_Rep1 878.48616759934 878.48506993586 47.874 2 -0.4118870067128384 0.11027870373552356 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 124818 8982 VLLKAQQVE True H1975_Epitope_Rep1 1026.60734536118 1026.6062499358602 39.454 2 -0.41194001515894413 0.11029399130569253 0.9438714419765777 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A'] 80896 18476 PLYIGEVVL True NCI_RA007_Epitope_Rep4 1001.57973363101 1001.57862993586 79.97 2 -0.41195390185258657 0.11030927835051546 0.9438714419765777 ['ENSG00000255154|ENST00000461393|HTD2'] 45778 7952 ISNKTVAV True PC9_epitope_Rep1 830.4861675993399 830.48506993586 35.41 2 -0.41201906576663194 0.11034174670538308 0.9438714419765777 ['NUP210L|p.Q1121K|1|0.36|ENSG00000143552|chr1:154054350-154054350|G/T|missense_variant'] 88455 14193 QYVDFHNQL True PC9_epitope_Rep4 1162.54072235334 1162.5396299358601 62.499 2 -0.4120495684060453 0.11035324032712529 0.9438714419765777 ['ENSG00000134899|ENST00000652225|ERCC5', 'nc|ENSG00000134899|P28715-2|ERCC5'] 1030 7303 AEAGALPAAA True H1975_Epitope_Rep2 840.4341320264799 840.43302993586 33.029 2 -0.4120530922727608 0.11035324032712529 0.9438714419765777 ['ENSG00000086544|ENST00000263370|ITPKC'] 45403 12360 ISDRPSLSV True PC9_epitope_Rep5 972.52400966004 972.52290993586 52.538 2 -0.4120598689241255 0.11035324032712529 0.9438714419765777 ['nc|ENSG00000239961|P59901-2|LILRA4', 'ENSG00000239961|ENST00000291759|LILRA4'] 105081 7184 STKYIIDP True H1975_Epitope_Rep2 935.4963979298699 935.49530993586 32.567 2 -0.41219878566270557 0.11041816994811532 0.9438714419765777 ['ENSG00000163788|ENST00000296088|SNRK'] 96979 6372 SEVICYGSR True H1975_Epitope_Rep3 1012.46478053176 1012.46368993586 29.493 2 -0.41221283475097875 0.11041816994811532 0.9438714419765777 ['LRP2|p.R2272C|1|0.38|ENSG00000081479|chr2:169206906-169206906|G/A|missense_variant'] 110484 11402 TIPSAPQAV True PC9_epitope_Rep2 882.4810822188999 882.47998993586 49.18 2 -0.41226851127763364 0.11046401759178134 0.9438714419765777 ['ENSG00000133216|ENST00000374630|EPHB2', 'nc|ENSG00000133216|P29323-3|EPHB2', 'nc|ENSG00000133216|P29323|EPHB2'] 98352 7835 SIHEIPREELR True PC9_epitope_Rep5 1377.7364620377698 1377.73480490379 35.081 3 -0.4122899829208244 0.11046401759178134 0.9438714419765777 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 33547 9976 GLISEAASPP True H1975_Epitope_Rep1 940.48656152216 940.48601496793 43.31 1 -0.412309777536917 0.11046401759178134 0.9438714419765777 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555226.1_1_14:81862181-81864726:-|nuORF'] 115373 9059 TVEKRRNTENI True H1975_Epitope_Rep3 1358.7266256300597 1358.72552993586 39.831 2 -0.41233591601816855 0.11047929908950352 0.9438714419765777 ['ENSG00000134516|ENST00000520908|DOCK2', 'ENST00000522138.1_1_5:169064330-169108764:+|nuORF'] 120876 8551 VGDVFRGG True PC9_epitope_Rep2 805.4082516318099 805.40714993586 38.253 2 -0.4125583566487531 0.11052893782961982 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 51821 24717 KKKKRKWLRQE True NCI_RA007_Epitope_Rep5 1526.9521493211398 1526.95104993586 102.56 2 -0.41260765200760086 0.110557597828701 0.9438714419765777 ['ENSG00000187862|ENST00000368236|TTC24'] 137809 10036 YPESTKNFNKF True H1975_Epitope_Rep1 1373.6615657620098 1373.6604699358602 43.542 2 -0.4126151195450698 0.110557597828701 0.9438714419765777 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|143|2|sense'] 43062 17163 IGGVSKSAEV True PC9_epitope_Rep1 945.51311062317 945.51200993586 70.838 2 -0.412622898641857 0.110557597828701 0.9438714419765777 ['ENST00000553399.1_1_14:68282450-68282693:-|nuORF'] 59047 5083 LGCCSVLCSDK True NCI_RA007_Epitope_Rep5 1126.48208747202 1126.48045490379 26.251 3 -0.4126326196684785 0.11056907776079151 0.9438714419765777 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 110934 17634 TLATRRSL True PC9_epitope_Rep5 916.54541381096 916.54430993586 72.841 2 -0.41264206045124413 0.11056907776079151 0.9438714419765777 ['ENST00000500537.2_1_11:112831441-112833979:-|nuORF'] 102181 8031 SPSATVVSA True PC9_epitope_Rep5 817.41814760917 817.4175949679301 35.83 1 -0.41266996894284314 0.11056907776079151 0.9438714419765777 ['nc|ENSG00000167767|Q6KB66-2|KRT80', 'ENSG00000167767|ENST00000394815|KRT80', 'CON__Q6KB66-1', 'nc|ENSG00000167767|Q6KB66-3|KRT80', 'ENST00000466011.1_1_12:52565184-52579482:-|nuORF'] 82100 10796 PTAEGLAAAA True PC9_epitope_Rep1 870.4446967101799 870.44358993586 46.414 2 -0.4128188999517317 0.11059583311863418 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 91101 9582 RLLWVFRRRWR True NCI_RA007_Epitope_Rep4 1642.9797014816597 1642.97860993586 43.696 2 -0.41287086585117644 0.11059583311863418 0.9438714419765777 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 11451 12578 DFTIQENGL True H1975_Epitope_Rep2 1035.48728979815 1035.48618993586 53.476 2 -0.4128709475257402 0.11059583311863418 0.9438714419765777 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-2|ADGRV1'] 3403 7332 AGKAVAITQSP True NCI_RA007_Epitope_Rep4 1041.58185888933 1041.5807699358602 34.841 2 -0.4128764705286795 0.11059583311863418 0.9438714419765777 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 124781 15567 VLKWQQIL True PC9_epitope_Rep1 1026.6226015025 1026.62150993586 64.702 2 -0.4128965633561607 0.11062638476203562 0.9438714419765777 ['ENST00000500268.6_1_4:10456341-10456455:-|nuORF'] 71034 4045 MESRPPPPP True H1975_Epitope_Rep2 1006.4906013567798 1006.48950993586 20.638 2 -0.41296719111974334 0.11062638476203562 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 62439 9803 LLSGALVS True H1975_Epitope_Rep1 758.4538048419 758.4532549679301 42.635 1 -0.41302932287045513 0.11066840695198187 0.9438714419765777 ['ENSG00000160190|ENST00000352133|SLC37A1', 'ENST00000496416.1_1_21:43985963-43995993:+|nuORF'] 20376 19696 EPIPYEFMA True PC9_epitope_Rep6 1095.49468367771 1095.4935899358602 88.417 2 -0.41302939072442746 0.11066840695198187 0.9438714419765777 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 13040 16911 DLQVRRIHP True H1975_Epitope_Rep2 1132.6465248345598 1132.6454299358602 70.295 2 -0.4130338976589534 0.11066840695198187 0.9438714419765777 ['ENST00000339626.5_1_13:41194051-41194435:+|nuORF'] 99204 13116 SLAVAISQTL True PC9_epitope_Rep1 1001.5757108797301 1001.5746099358599 55.318 2 -0.4130364145350329 0.11066840695198187 0.9438714419765777 ['ENSG00000181240|ENST00000321510|SLC25A41'] 15800 11754 EDGSFSFYSL True PC9_epitope_Rep5 1150.4818700645399 1150.48076993586 50.21 2 -0.4130918543301525 0.11066840695198187 0.9438714419765777 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 67365 17991 LTDRLQLTL True PC9_epitope_Rep2 1071.62880908175 1071.6277099358601 74.504 2 -0.4131298798888101 0.11067987841527709 0.9438714419765777 ['ENSG00000061918|ENST00000264424|GUCY1B1', 'nc|ENSG00000061918|Q02153-3|GUCY1B1', 'nc|ENSG00000061918|Q02153-2|GUCY1B1'] 40509 5115 HSFSSATEI True NCI_RA007_Epitope_Rep4 977.44542498617 977.44432993586 26.188 2 -0.413132293916424 0.11067987841527709 0.9438714419765777 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 26996 21646 FLLFC[Carbamidomethyl]MFSPHL True PC9_epitope_Rep5 1410.68283616333 1410.6817299358602 88.306 2 -0.41315148987323014 0.11067987841527709 0.9438714419765777 ['ENST00000519380.1_1_8:74209332-74209419:+|nuORF'] 121622 7665 VGLERQVTVP True H1975_Epitope_Rep3 1096.62405805448 1096.62296993586 34.465 2 -0.4131830815428738 0.11069515043275176 0.9438714419765777 ['CON__Q3Y5Z3'] 6999 8054 AQQPHIAGV True PC9_epitope_Rep5 919.4875645816699 919.48646993586 35.917 2 -0.4131957152938516 0.11071042192571222 0.9438714419765777 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 34266 9702 GPLFFWKDST True PC9_epitope_Rep4 1196.5866099165996 1196.58496490379 44.954 3 -0.4132955500891392 0.11072189023971427 0.9438714419765777 ['ENST00000237264.8_2_6:134309061-134309127:+|nuORF'] 6186 9351 APPYRRIS True PC9_epitope_Rep4 958.5348491272599 958.53374993586 43.576 2 -0.4133532358199122 0.11072189023971427 0.9438714419765777 ['ENSG00000164451|ENST00000368596|CALHM4'] 90267 4206 RHRFRYIP True H1975_Epitope_Rep2 1143.6413798844699 1143.63973490379 21.286 3 -0.4133640433065412 0.11072189023971427 0.9438714419765777 ['nc|ENSG00000101773|Q99708-2|RBBP8', 'ENSG00000101773|ENST00000327155|RBBP8'] 1283 5110 AEDSDSDDNIK True H1975_Epitope_Rep3 1207.4840548925101 1207.48294993586 24.767 2 -0.4134137403760203 0.11073716022459948 0.9438714419765777 ['nc|ENSG00000163166|Q96ST2-2|IWS1', 'nc|ENSG00000163166|Q96ST2-3|IWS1', 'ENSG00000163166|ENST00000295321|IWS1'] 37919 10063 HEDVNVGSI True PC9_epitope_Rep6 968.45632402304 968.45522993586 49.298 2 -0.41343318175744587 0.11075242968508534 0.9438714419765777 ['ENSG00000133302|ENST00000265140|SLF1'] 96500 7740 SELEAQTGL True H1975_Epitope_Rep2 946.4607406971398 946.4596499358599 34.725 2 -0.413466032311146 0.11076769862119885 0.9438714419765777 ['nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'PTPRN|p.Y719Tfs*33|1|0.13|ENSG00000054356|chr2:219297067-219297067|G/-|frameshift_variant', 'ENST00000462351.5_1_2:220160899-220172331:-|nuORF'] 78664 5216 PEALPAEPAAE True PC9_epitope_Rep6 1093.52915461013 1093.52804993586 27.831 2 -0.41353957553927384 0.1107944302319592 0.9438714419765777 ['nc|ENSG00000116514|Q6ZMZ0|RNF19B', 'nc|ENSG00000116514|Q6ZMZ0-2|RNF19B', 'ENSG00000116514|ENST00000235150|RNF19B'] 126278 11225 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48506993586 48.166 2 -0.41354219902632294 0.1107944302319592 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 16663 6461 EETLDEGPP True H1975_Epitope_Rep3 985.4240208352498 985.42292993586 29.824 2 -0.4136313161962296 0.1107944302319592 0.9438714419765777 ['ENSG00000100442|ENST00000396062|FKBP3'] 13150 15875 DLSSRSLLGI True PC9_epitope_Rep4 1059.59242357303 1059.5913299358601 68.992 2 -0.4136449044572025 0.1107944302319592 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 5743 6389 APDEKYVAA True PC9_epitope_Rep5 962.4709114580199 962.46980993586 29.552 2 -0.41372156727987996 0.1108096971361857 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 79326 4887 PGKQGLRPPP True NCI_RA007_Epitope_Rep4 1045.6032630402499 1045.60216993586 25.247 2 -0.41373545077030266 0.11082496351618165 0.9438714419765777 ['ENST00000489427.1_1_3:49045513-49049068:+|nuORF', 'ENST00000491365.1_1_3:49045513-49045807:+|nuORF'] 118479 13633 VDRQSITL True PC9_epitope_Rep5 930.5134449763399 930.51234993586 57.463 2 -0.4137880336204374 0.11083832643741308 0.9438714419765777 ['ENST00000584519.5_1_17:15881363-15902918:-|nuORF', 'ENSG00000214941|ENST00000399277|ZSWIM7'] 55805 4973 LDELEQKQ True H1975_Epitope_Rep3 1001.5029398622898 1001.50184993586 24.256 2 -0.41380372747223143 0.11083832643741308 0.9438714419765777 ['ENSG00000101407|ENST00000373447|TTI1'] 26831 14234 FLELCTQQVL True NCI_RA007_Epitope_Rep1 1192.6161957927202 1192.6150899358602 59.406 2 -0.4138374620987952 0.11083836858006042 0.9438714419765777 ['nc|ENSG00000230246|P0DKV0-2|SPATA31C1', 'nc|ENSG00000230246|P0DKV0|SPATA31C1'] 140889 13058 YYVARRFKTG True PC9_epitope_Rep1 1259.6774906096698 1259.67583490379 55.095 3 -0.4139035892048838 0.11083836858006042 0.9438714419765777 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'NF1|p.H1943Rfs*17|3|0.12|ENSG00000196712|chr17:31334853-31334863|ACCTTTGTTTG/-|frameshift_variant', 'NF1|p.R1970Sfs*6|1|0.43|ENSG00000196712|chr17:31334931-31334932|AA/-|frameshift_variant', 'NF1|p.T2108Nfs*12|1|0.16|ENSG00000196712|chr17:31336808-31336809|-/A|frameshift_variant', 'NF1|p.G1807Afs*56|1|0.52|ENSG00000196712|chr17:31327648-31327648|G/-|frameshift_variant', 'ENST00000493220.5_2_17:29556858-29657521:+|nuORF'] 98561 13316 SILVMM[Oxidation]LSL True PC9_epitope_Rep3 1021.55517613973 1021.55406993586 56.254 2 -0.41393242958763854 0.11083836858006042 0.9438714419765777 ['ENST00000481463.5_1_3:195101781-195102681:-|nuORF'] 107650 7716 TAIFPSKP True H1975_Epitope_Rep3 859.4803539429099 859.47924993586 34.663 2 -0.41398703646240775 0.11083836858006042 0.9438714419765777 ['SLC44A5|p.H538Tfs*18|1|0.16|ENSG00000137968|chr1:75217878-75217878|G/-|frameshift_variant', 'nc|ENSG00000137968|Q8NCS7-5|SLC44A5', 'ENSG00000137968|ENST00000370859|SLC44A5', 'nc|ENSG00000137968|Q8NCS7|SLC44A5', 'SLC44A5|p.S229Vfs*8|1|0.19|ENSG00000137968|chr1:75237043-75237044|-/T|frameshift_variant'] 82585 11146 PVHSDDSF True PC9_epitope_Rep4 902.37701107318 902.37590993586 50.653 2 -0.41398886980786403 0.11083836858006042 0.9438714419765777 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|1|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|8'] 124535 16051 VLGAQPDLLS True PC9_epitope_Rep5 1011.56006081559 1011.55896993586 66.728 2 -0.4140199365727822 0.11083836858006042 0.9438714419765777 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 7310 17703 ARRRLEIEVP True H1975_Epitope_Rep2 1237.72550343125 1237.7244099358602 73.416 2 -0.4140292695551959 0.11083836858006042 0.9438714419765777 ['ENSG00000163082|ENST00000321276|SGPP2', 'nc|ENSG00000163082|Q8IWX5-2|SGPP2'] 21916 13581 ESGETWLEYLY True H1975_Epitope_Rep1 1388.61361251008 1388.61250993586 57.368 2 -0.41404254707638005 0.11083836858006042 0.9438714419765777 ['DNASE2B|p.G60W|1|0.29|ENSG00000137976|chr1:84401953-84401953|G/T|missense_variant'] 112018 15212 TLSSQVINP True PC9_epitope_Rep3 957.51311062317 957.51200993586 63.658 2 -0.41406215223603965 0.11083836858006042 0.9438714419765777 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 74346 12402 NIQELQLIPGP True NCI_RA007_Epitope_Rep1 1220.6764875501597 1220.67538993586 52.216 2 -0.41407471316277056 0.11085363132327446 0.9438714419765777 ['ENSG00000183324|ENST00000331090|REC114'] 38501 6463 HHDDPEVL True PC9_epitope_Rep3 960.4301092752 960.42900993586 29.886 2 -0.41414665866885286 0.11093564942755625 0.9438714419765777 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000458289.2_1_4:81001192-81001915:+|nuORF'] 123715 8131 VIQEKEKKGKE True H1975_Epitope_Rep1 1314.7507151195798 1314.74960993586 36.214 2 -0.4141700743027586 0.11093564942755625 0.9438714419765777 ['ENSG00000089048|ENST00000617257|ESF1'] 86072 8847 QPNGAGFAA True PC9_epitope_Rep3 831.38751618723 831.38640993586 38.982 2 -0.41417498336443537 0.110947101026398 0.9438714419765777 ['nc|ENSG00000173744|P52594-2|AGFG1', 'ENSG00000173744|ENST00000310078|AGFG1'] 64983 6149 LSDDWRQRQPM True H1975_Epitope_Rep1 1430.67248188222 1430.6713899358601 28.722 2 -0.4141926538365028 0.110947101026398 0.9438714419765777 ['nc|ENSG00000185792|Q7RTR0-2|NLRP9', 'ENSG00000185792|ENST00000332836|NLRP9'] 45107 10444 IQSPSNWNP True PC9_epitope_Rep1 1041.48795850449 1041.48686993586 45.06 2 -0.41422171852363265 0.110947101026398 0.9438714419765777 ['ENSG00000188227|ENST00000627814|ZNF793', 'nc|ENSG00000188227|Q6ZN11-2|ZNF793', 'nc|ENSG00000188227|Q6ZN11-3|ZNF793'] 91963 4353 RPPPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 23.185 2 -0.4142449184249944 0.11097952388308188 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 71928 9765 MPSRPEASL True PC9_epitope_Rep1 986.4855159763399 986.48440993586 42.422 2 -0.414308871437346 0.11099478236990251 0.9438714419765777 ['ENST00000549913.6_1_12:113306162-113306792:+|nuORF'] 46079 13334 ISYLRRPP True PC9_epitope_Rep1 1000.5817993196799 1000.58070993586 56.147 2 -0.4144556125698984 0.11106152921994336 0.9438714419765777 ['ENST00000175756.9_1_2:131132254-131132749:+|nuORF'] 97022 10787 SEVRPTTSL True PC9_epitope_Rep2 988.5189242796 988.51782993586 46.809 2 -0.4146361715951071 0.11112827377887619 0.9438714419765777 ['ENST00000263256.6_1_22:41999317-42003291:-|nuORF'] 14502 8739 DTWESLQK True PC9_epitope_Rep5 1005.47672511445 1005.47562993586 38.557 2 -0.4147006607143799 0.11114352892718005 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 82185 17622 PTETLLNTV True PC9_epitope_Rep2 986.5284263341399 986.5273299358599 73.062 2 -0.41474666730671916 0.11117594563053478 0.9438714419765777 ['nc|ENSG00000165209|Q96SI9-2|STRBP', 'ENSG00000165209|ENST00000348403|STRBP', 'ENST00000407982.6_1_9:125930502-125941310:-|nuORF'] 16054 9730 EEAPPPALPP True H1975_Epitope_Rep1 1016.5178616504398 1016.51676993586 42.353 2 -0.41484700823320847 0.11129417014192795 0.9438714419765777 ['ENSG00000180720|ENST00000682254|CHRM4'] 55992 8928 LDINKEKPGAS True H1975_Epitope_Rep3 1170.6244519773 1170.62334993586 39.339 2 -0.414919439943178 0.11132276221856123 0.9438714419765777 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ', 'POLQ|p.S1786Ifs*30|1|0.19|ENSG00000051341|chr3:121487574-121487574|C/-|frameshift_variant', 'POLQ|p.L1430Ffs*5|1|0.16|ENSG00000051341|chr3:121488641-121488642|-/A|frameshift_variant'] 43068 6496 IGHDACSYFTS True PC9_epitope_Rep4 1199.4917235555902 1199.4900749037902 32.108 3 -0.41492678773706004 0.11132276221856123 0.9438714419765777 ['PIK3C2G|p.D929G|1|0.47|ENSG00000139144|chr12:18491551-18491551|A/G|missense_variant'] 124182 11349 VLADVIDN True NCI_RA007_Epitope_Rep4 857.44944773745 857.4488949679301 50.561 1 -0.41493946057349596 0.11132276221856123 0.9438714419765777 ['nc|ENSG00000128050|P22234-2|PAICS', 'ENSG00000128050|ENST00000512576|PAICS'] 120534 11112 VGAADGLVL True NCI_RA007_Epitope_Rep5 813.45961849833 813.4590749679301 49.377 1 -0.41495392789931257 0.11133801245860003 0.9438714419765777 ['ENSG00000146373|ENST00000521654|RNF217'] 5397 8000 ALVNRDRTL True PC9_epitope_Rep5 1056.6039913162401 1056.60288993586 35.711 2 -0.41499854155537735 0.11137042248687236 0.9438714419765777 ['ENST00000361549.2_1_12:108912031-108913249:+|nuORF', 'ENSG00000198855|ENST00000552695|FICD'] 39774 10122 HQDKVIKI True PC9_epitope_Rep2 979.5814649665099 979.58036993586 44.273 2 -0.415012889825963 0.11138567138567139 0.9438714419765777 ['ENSG00000138823|ENST00000265517|MTTP'] 27395 10949 FNDGNAAVV True PC9_epitope_Rep3 905.4242956187699 905.42318993586 47.096 2 -0.4150404275344739 0.11139709667455987 0.9438714419765777 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 98136 13537 SICEKVIVP True PC9_epitope_Rep1 986.5470536037399 986.54594993586 56.926 2 -0.4150419251451465 0.11139709667455987 0.9438714419765777 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L'] 70080 20140 LYIGWDKHYGF True PC9_epitope_Rep3 1397.67682190333 1397.67572993586 82.722 2 -0.41509701953812905 0.11139709667455987 0.9438714419765777 ['ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4', 'nc|ENSG00000041357|P25789-2|PSMA4'] 109021 6452 TEWGSLGGAT True PC9_epitope_Rep1 977.4454249861698 977.44432993586 29.623 2 -0.41520910306611575 0.11145999553885486 0.9438714419765777 ['ENSG00000198355|ENST00000360612|PIM3'] 25144 4227 FDQKKEQKP True NCI_RA007_Epitope_Rep4 1146.6033226098998 1146.60166490379 22.573 3 -0.41524696269842043 0.11145999553885486 0.9438714419765777 ['ENSG00000116830|ENST00000369466|TTF2', 'nc|ENSG00000116830|Q9UNY4-2|TTF2'] 82453 10844 PVDNLVIK True H1975_Epitope_Rep3 896.53311779176 896.53256496793 46.793 1 -0.4152810816151939 0.11145999553885486 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 25951 12384 FGSGAGSSSF True PC9_epitope_Rep5 902.37701107318 902.37590993586 52.631 2 -0.41528797881686547 0.11147524106928383 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF'] 100890 10707 SLSITGTWLD True PC9_epitope_Rep1 1091.54989005471 1091.5487899358602 46.074 2 -0.41534268612247627 0.11149048607655748 0.9438714419765777 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|196|3|sense'] 56034 10126 LDKLQSSYF True NCI_RA007_Epitope_Rep2 1099.5549754351498 1099.5538699358601 43.976 2 -0.4154117714323134 0.11152097452174659 0.9438714419765777 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.Q2856Rfs*14|1|0.22|ENSG00000007174|chr17:11807876-11807876|C/-|frameshift_variant', 'DNAH9|p.R1341Gfs*27|1|0.35|ENSG00000007174|chr17:11689841-11689841|C/-|frameshift_variant', 'DNAH9|p.A1913Vfs*27|1|0.25|ENSG00000007174|chr17:11727846-11727846|C/-|frameshift_variant', 'DNAH9|p.N367Kfs*9|1|0.28|ENSG00000007174|chr17:11617604-11617605|-/A|frameshift_variant'] 82188 5544 PTFSQTDR True PC9_epitope_Rep5 950.4457593393399 950.44466993586 26.331 2 -0.41541439456608764 0.11152097452174659 0.9438714419765777 ['ENSG00000151491|ENST00000281172|EPS8'] 61332 9370 LLEEGEKIQH True NCI_RA007_Epitope_Rep2 1194.6244519773 1194.62334993586 41.056 2 -0.415462677984996 0.11155146087463758 0.9438714419765777 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 15478 6961 EAQAELQKRDE True H1975_Epitope_Rep3 1315.63680756615 1315.6357099358602 31.737 2 -0.4154820041186076 0.11155146087463758 0.9438714419765777 ['DIAPH2|p.R928Lfs*20|1|0.47|ENSG00000147202|chrX:97247778-97247778|G/-|frameshift_variant', 'nc|ENSG00000147202|O60879-2|DIAPH2', 'nc|ENSG00000147202|O60879-3|DIAPH2', 'ENSG00000147202|ENST00000324765|DIAPH2'] 29363 19352 FVEHGPYVVT True PC9_epitope_Rep6 1146.5709598524597 1146.5698699358602 87.086 2 -0.4155155492912608 0.11160101564644524 0.9438714419765777 ['ENSG00000106066|ENST00000265394|CPVL'] 127410 18356 VQRASFFAA True PC9_epitope_Rep1 995.5188647099498 995.51776993586 75.396 2 -0.4155384637455411 0.11163341282231638 0.9438714419765777 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'ENST00000556959.1_1_14:72196918-72202208:+|nuORF'] 136950 12620 YKGNQTAL True PC9_epitope_Rep4 893.4606811274899 893.45958993586 56.382 2 -0.4156171214510268 0.11164865328529765 0.9438714419765777 ['ENST00000466187.2_1_10:70105306-70105504:-|nuORF'] 133603 25620 WIMLRRLYI True PC9_epitope_Rep1 1262.73216903482 1262.7310699358602 103.57 2 -0.41570592897987885 0.11174966976034036 0.9438714419765777 ['ENST00000590392.5_1_19:37203312-37203378:+|nuORF'] 111963 21518 TLSETFPSL True PC9_epitope_Rep2 993.5018772331299 993.50078993586 88.238 2 -0.4157725818882407 0.11178206271872641 0.9438714419765777 ['ENSG00000218819|ENST00000405799|TDRD15'] 25674 6402 FFERRYQERMK True NCI_RA007_Epitope_Rep5 1588.7932657212398 1588.79161490379 31.297 3 -0.41581102146830023 0.111797299847323 0.9438714419765777 ['nc|ENSG00000188732|A4D161-3|FAM221A', 'nc|ENSG00000188732|A4D161-2|FAM221A', 'ENSG00000188732|ENST00000344962|FAM221A'] 124928 9945 VLLVEMLE True H1975_Epitope_Rep2 944.52525553 944.52414993586 43.242 2 -0.4160158721593657 0.11184684530140324 0.9438714419765777 ['ENSG00000110446|ENST00000227880|SLC15A3'] 119684 6119 VESVRTPYDL True PC9_epitope_Rep1 1177.59790287629 1177.5962549037902 28.351 3 -0.4160672967582707 0.11189638905566515 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 131635 11741 VWDWWHRRRRR True NCI_RA007_Epitope_Rep2 1707.90832744655 1707.9072299358602 50.267 2 -0.41608772743151856 0.1119097037583409 0.9438714419765777 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 115492 8859 TVGEITDALKK True H1975_Epitope_Rep1 1173.6605031328497 1173.6594099358601 38.995 2 -0.41613021748163487 0.1119097037583409 0.9438714419765777 ['ENSG00000146085|ENST00000274813|MMUT'] 41436 8732 IAVEIYRWIRD True H1975_Epitope_Rep1 1432.7826839542 1432.7815899358602 38.516 2 -0.41619572009264516 0.11192493739064804 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant'] 8877 11510 AVFPSIVGRPR True PC9_epitope_Rep6 1197.69822605425 1197.6971299358602 55.352 2 -0.41622420631042156 0.11195540308747856 0.9438714419765777 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 100467 7966 SLPHFPGCAGP True PC9_epitope_Rep2 1081.5015003936498 1081.50040993586 36.006 2 -0.4162288463376264 0.11195540308747856 0.9438714419765777 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62'] 106314 8474 SVRRPERRTW True NCI_RA007_Epitope_Rep2 1341.7377994504498 1341.73615490379 37.605 3 -0.41628394399953045 0.1119687146238551 0.9438714419765777 ['ENST00000503886.5_1_10:63170188-63170446:-|nuORF'] 35792 22571 GTWKTFLL True PC9_epitope_Rep5 964.5382031721998 964.53710993586 91.824 2 -0.41631109349870454 0.1119687146238551 0.9438714419765777 ['ENST00000524833.5_1_11:107992333-108005114:+|nuORF'] 97021 23578 SEVRLRKG True PC9_epitope_Rep4 943.5563128478299 943.55520993586 98.999 2 -0.4163729719877054 0.11199917672886937 0.9438714419765777 ['ENST00000361264.8_1_9:34126412-34126766:-|nuORF'] 59836 9102 LHDYCDIIKHP True H1975_Epitope_Rep3 1352.65470655976 1352.65306490379 39.999 3 -0.416382771104959 0.11199917672886937 0.9438714419765777 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 19303 9794 ELLTKTLPD True H1975_Epitope_Rep1 1028.57537652656 1028.57426993586 42.6 2 -0.4163982519688202 0.11201440699768458 0.9438714419765777 ['ENSG00000139372|ENST00000392872|TDG', 'ENST00000544060.1_1_12:104359692-104373925:+|nuORF', 'ENST00000542926.5_1_12:104373661-104376713:+|nuORF', 'ENST00000545698.1_1_12:104359681-104373925:+|nuORF'] 135479 3784 YEDEINRRTA True H1975_Epitope_Rep2 1265.60002813461 1265.59837490379 19.568 3 -0.4164996490594705 0.11202963674407436 0.9438714419765777 ['CON__P08729'] 56847 9431 LEDFKQAA True H1975_Epitope_Rep1 920.46034677432 920.45924993586 41.19 2 -0.4165548111546845 0.11207916716689248 0.9438714419765777 ['nc|ENSG00000139865|Q86TZ1|TTC6', 'nc|ENSG00000139865|Q86TZ1-2|TTC6', 'ENSG00000139865|ENST00000553443|TTC6'] 130884 16498 VVHAVEVAL True PC9_epitope_Rep1 935.5440168286299 935.54290993586 68.284 2 -0.41663568498070613 0.1121038551241597 0.9438714419765777 ['CON__P12763'] 20579 17195 EQEFSQGASL True PC9_epitope_Rep1 1094.48801807414 1094.4869299358602 70.96 2 -0.4166680762751322 0.1121038551241597 0.9438714419765777 ['nc|ENSG00000198520|Q6PIY5-2|ARMH1', 'ENST00000357508.5_1_1:45155363-45190065:+|nuORF', 'ENSG00000198520|ENST00000535358|ARMH1', 'ENST00000444751.5_1_1:45140474-45166606:+|nuORF', 'ENST00000424484.5_1_1:45155363-45158665:+|nuORF'] 32760 4666 GIAGSLTNK True NCI_RA007_Epitope_Rep3 859.47633119163 859.4752299358599 25.286 2 -0.416672571213965 0.1121038551241597 0.9438714419765777 ['ENSG00000175445|ENST00000650287|LPL'] 7764 9726 ASVFPDRIFVM True H1975_Epitope_Rep3 1280.6587293110401 1280.65762993586 42.431 2 -0.41667913821589003 0.1121038551241597 0.9438714419765777 ['nc|ENSG00000157833|Q75VX8-3|GAREM2', 'nc|ENSG00000157833|Q75VX8-2|GAREM2', 'ENSG00000157833|ENST00000401533|GAREM2'] 139840 12567 YVDIICPHY True H1975_Epitope_Rep1 1121.52156713189 1121.52046993586 53.385 2 -0.4167129472303468 0.1121038551241597 0.9438714419765777 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155100369-155106166:+|nuORF'] 140311 13092 YYDPKHVIF True PC9_epitope_Rep6 1180.59169529704 1180.5900449037902 61.967 3 -0.41674245380558883 0.1121190815084115 0.9438714419765777 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000468892.5_1_3:183907488-183910505:+|nuORF'] 83992 5920 QEMDSGTEY True H1975_Epitope_Rep2 1058.38625542754 1058.38514993586 27.758 2 -0.41677326324489783 0.11213046162288223 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 139081 22410 YSLWVYQCNSL True PC9_epitope_Rep2 1374.6278231055799 1374.62672993586 91.693 2 -0.41679801327536775 0.11213046162288223 0.9438714419765777 ['ENST00000460720.5_1_2:9546965-9548358:-|nuORF', 'ENST00000490426.5_1_2:9546965-9563580:-|nuORF', 'ENSG00000119185|ENST00000355346|ITGB1BP1'] 67934 18290 LTLGNFFNI True PC9_epitope_Rep3 1037.55458151233 1037.5534899358602 75.558 2 -0.41681581207779184 0.11213046162288223 0.9438714419765777 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.F1306Ifs*2|1|0.33|ENSG00000188906|chr12:40305920-40305932|AACTTTGATTTTA/-|frameshift_variant', 'LRRK2|p.L498Ffs*32|1|0.15|ENSG00000188906|chr12:40259552-40259553|-/T|frameshift_variant'] 3172 8767 AGEGLAKEQP True NCI_RA007_Epitope_Rep1 998.5032742154599 998.50216993586 38.104 2 -0.4169575846110198 0.112179981823482 0.9438714419765777 ['PCARE|p.E59K|1|0.27|ENSG00000179270|chr2:29074087-29074087|C/T|missense_variant'] 33197 8546 GLAAERGQVL True NCI_RA007_Epitope_Rep4 1012.5665431783599 1012.56544993586 39.666 2 -0.41702200908074016 0.11221042884823128 0.9438714419765777 ['ENST00000240101.2_1_8:29205656-29205974:-|nuORF'] 129614 9180 VTGVLQGEKQY True H1975_Epitope_Rep2 1220.6401020414398 1220.63900993586 40.265 2 -0.41704684455761154 0.11221042884823128 0.9438714419765777 ['ENST00000591377.1_1_19:9869411-9872887:-|nuORF'] 118571 8448 VEAALPGV True H1975_Epitope_Rep3 754.4225047136199 754.4219549679301 37.479 1 -0.4171247342878078 0.11223894928157471 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 100614 22057 SLQNLILAL True PC9_epitope_Rep3 983.6015317047498 983.60042993586 90.139 2 -0.41713665395943245 0.11223894928157471 0.9438714419765777 ['ENST00000376055.8_1_20:30310076-30310447:-|nuORF', 'ENST00000376062.6_1_20:30310076-30310181:-|nuORF', 'ENST00000420488.5_1_20:30310076-30311747:-|nuORF', 'ENST00000456404.5_1_20:30310076-30311747:-|nuORF'] 3531 15332 AGLVPQALGVG True PC9_epitope_Rep6 980.5654805491998 980.56438993586 71.103 2 -0.41718080470296415 0.11223894928157471 0.9438714419765777 ['ENST00000367739.8_2_6:137540468-137540531:-|nuORF'] 345 7129 AAKDAEKIREL True NCI_RA007_Epitope_Rep3 1242.6932002434598 1242.6915449037901 35.163 3 -0.4173237845354187 0.11229790662986266 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 118168 11129 VAVPTLNAL True NCI_RA007_Epitope_Rep2 896.5331177917599 896.53202993586 47.87 2 -0.4173473314087052 0.11229790662986266 0.9438714419765777 ['ENSG00000115649|ENST00000360507|CNPPD1'] 115072 17125 TTSLRIRIVNF True NCI_RA007_Epitope_Rep2 1318.7721192705 1318.77102993586 71.35 2 -0.4173539440612114 0.11229790662986266 0.9438714419765777 ['ENSG00000185101|ENST00000332826|ANO9', 'nc|ENSG00000185101|A1A5B4-3|ANO9', 'ENST00000528927.5_1_11:431754-441926:-|nuORF'] 74680 14508 NLIFPGVR True PC9_epitope_Rep5 914.5337864980999 914.53268993586 60.805 2 -0.41742219074292397 0.11229790662986266 0.9438714419765777 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'RIMS1|p.G1501V|1|0.26|ENSG00000079841|chr6:72390733-72390733|G/T|missense_variant', 'RIMS1|p.G1501C|1|0.25|ENSG00000079841|chr6:72390732-72390732|G/T|missense_variant', 'ENST00000431478.2_1_6:73100573-73110413:+|nuORF', 'nc|ENSG00000079841|Q86UR5-11|RIMS1', 'nc|ENSG00000176406|Q9UQ26-7|RIMS2', 'nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1', 'nc|ENSG00000079841|Q86UR5-10|RIMS1', 'nc|ENSG00000079841|Q86UR5-13|RIMS1', 'nc|ENSG00000079841|Q86UR5-9|RIMS1', 'nc|ENSG00000079841|Q86UR5-12|RIMS1'] 105066 6807 STKGTSKDP True H1975_Epitope_Rep2 919.4610750503099 919.45996993586 31.101 2 -0.4174232343574913 0.11229790662986266 0.9438714419765777 ['nc|ENSG00000141738|Q14451-4|GRB7', 'ENSG00000141738|ENST00000309156|GRB7', 'nc|ENSG00000141738|Q14451-3|GRB7', 'nc|ENSG00000141738|Q14451-2|GRB7'] 7563 19077 ASFYQTYRE True PC9_epitope_Rep2 1163.52473793603 1163.52364993586 78.745 2 -0.41743314945628773 0.11232834439129764 0.9438714419765777 ['ENST00000264010.8_1_16:67671865-67671916:+|nuORF'] 123677 11199 VINTVTSGMAP True PC9_epitope_Rep2 1088.55359553616 1088.5524899358602 48.404 2 -0.4174381822893346 0.11232834439129764 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 99685 9665 SLGEGLITA True H1975_Epitope_Rep2 859.46509780159 859.46454496793 42.158 1 -0.41754517174277733 0.1124121378364478 0.9438714419765777 ['ENSG00000100401|ENST00000356244|RANGAP1'] 113495 9782 TQSKMYHCDIY True H1975_Epitope_Rep3 1387.59005769787 1387.5889699358602 42.65 2 -0.41755608561857105 0.11242349956285465 0.9438714419765777 ['ENSG00000197013|ENST00000358491|ZNF429'] 54975 4977 LAIDDIHFDD True NCI_RA007_Epitope_Rep1 1172.53496826656 1172.5338699358601 23.442 2 -0.4175678738650941 0.11242349956285465 0.9438714419765777 ['ENSG00000128655|ENST00000286063|PDE11A', 'nc|ENSG00000128655|Q9HCR9-4|PDE11A', 'nc|ENSG00000128655|Q9HCR9-3|PDE11A', 'nc|ENSG00000128655|Q9HCR9-2|PDE11A', 'ENST00000497003.5_1_2:178552959-178791632:-|nuORF', 'NFE2L2-PDE11A|3|fusion', 'NFE2L2-PDE11A|1|fusion', 'NFE2L2-PDE11A|2|fusion'] 110601 10221 TISVNVLY True H1975_Epitope_Rep2 907.50148331031 907.50038993586 44.321 2 -0.41761157249232317 0.11242349956285465 0.9438714419765777 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'nc|ENSG00000007174|Q9NYC9-3|DNAH9'] 127253 9920 VQKGLCVSVP True PC9_epitope_Rep2 1028.5688516774799 1028.56774993586 43.49 2 -0.41763847497161793 0.11243678752035656 0.9438714419765777 ['SIGLEC12|p.E163K|1|0.34|ENSG00000254521|chr19:51500241-51500241|C/T|missense_variant'] 33936 12169 GMYLGEIVRQ True PC9_epitope_Rep6 1164.59612905448 1164.59502993586 58.165 2 -0.4176694121958015 0.11243678752035656 0.9438714419765777 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156510|Q2TB90-2|HKDC1', 'ENST00000470920.1_1_10:71018680-71021051:+|nuORF'] 90026 14527 RGGGCGGGG True NCI_RA007_Epitope_Rep3 676.2711065359999 676.27055496793 64.45 1 -0.41776701326140586 0.11245200219418541 0.9438714419765777 ['ENST00000407595.2_1_2:56411641-56419673:+|nuORF'] 100647 10007 SLQSRARTL True PC9_epitope_Rep1 1030.5883412520998 1030.5872499358602 43.359 2 -0.41784847434459965 0.11247664592653538 0.9438714419765777 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000061794|P82673-2|MRPS35', 'ENSG00000061794|ENST00000081029|MRPS35', 'MRPS35-PPFIBP1|3|fusion'] 112900 15198 TPQAYSSTL True PC9_epitope_Rep1 966.46582607758 966.46472993586 63.279 2 -0.41785282952864405 0.11247664592653538 0.9438714419765777 ['ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 66505 5813 LSSCCMFFFSP True H1975_Epitope_Rep2 1267.5075739438698 1267.5064699358602 27.35 2 -0.41789058953818187 0.11247664592653538 0.9438714419765777 ['ENST00000497194.6_1_11:71713256-71713580:+|nuORF'] 121046 13275 VGFLMKNAP True PC9_epitope_Rep3 975.5211732090698 975.52006993586 56.097 2 -0.4179078048460682 0.11247664592653538 0.9438714419765777 ['ENSG00000104549|ENST00000265896|SQLE'] 64109 15965 LQEEKLIYV True PC9_epitope_Rep4 1133.63322575585 1133.6321299358601 69.339 2 -0.41792774476267847 0.11247664592653538 0.9438714419765777 ['ENSG00000122591|ENST00000432176|HYCC1', 'nc|ENSG00000122591|Q9BYI3-2|HYCC1'] 133744 14349 WLLKALQQF True PC9_epitope_Rep1 1145.6597152872098 1145.65807490379 60.017 3 -0.4179459273555152 0.11249185835247334 0.9438714419765777 ['nc|ENSG00000162365|Q5TCH4-2|CYP4A22', 'ENSG00000162365|ENST00000371891|CYP4A22', 'nc|ENSG00000187048|Q02928-2|CYP4A11', 'ENSG00000187048|ENST00000310638|CYP4A11'] 126619 14963 VPPSAYIL True H1975_Epitope_Rep2 858.4851049701799 858.48400993586 62.706 2 -0.41797319743342914 0.11250707025692885 0.9438714419765777 ['ENSG00000229183|ENST00000378149|PGA4', 'ENSG00000229859|ENST00000325558|PGA3', 'ENSG00000256713|ENST00000312403|PGA5'] 126406 18514 VPLLGGLL True H1975_Epitope_Rep1 780.5109257952 780.51037496793 77.189 1 -0.41812138808273813 0.11253170631384109 0.9438714419765777 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant'] 120031 15041 VFDYEAAG True PC9_epitope_Rep4 870.3759484440199 870.3753949679301 65.787 1 -0.41813390985958604 0.11253170631384109 0.9438714419765777 ['ENSG00000130758|ENST00000253055|MAP3K10'] 14011 6298 DRWRVAWLFPP True PC9_epitope_Rep2 1441.7618889399698 1441.76023490379 29.623 3 -0.4181497711080758 0.11253170631384109 0.9438714419765777 ['ENST00000216121.11_1_22:29951115-29951346:-|nuORF'] 55692 14546 LDCWVVWEVY True H1975_Epitope_Rep2 1310.6005457285798 1310.59944993586 61.107 2 -0.4181562290449801 0.11253170631384109 0.9438714419765777 ['nc|ENSG00000174844|Q6ZR08-4|DNAH12'] 44911 20391 IQDNYLLI True PC9_epitope_Rep4 990.5385970950199 990.5380449679301 86.58 1 -0.4181664929911913 0.11253170631384109 0.9438714419765777 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'nc|ENSG00000165323|Q8TDW7-2|FAT3'] 79868 22799 PIKAARYRRP True PC9_epitope_Rep1 1226.7360085453 1226.73490993586 92.508 2 -0.41817320906128913 0.11254691597113918 0.9438714419765777 ['ENSG00000139874|ENST00000267377|SSTR1', 'SSTR1|p.H161R|1|0.12|ENSG00000139874|chr14:38209871-38209871|A/G|missense_variant'] 126904 12876 VPVAEQTP True PC9_epitope_Rep1 839.4388830537499 839.43778993586 54.401 2 -0.41818599609901436 0.11256212510711225 0.9438714419765777 ['ZSCAN9|p.L158V|2|0.09|ENSG00000137185|chr6:28227741-28227741|C/G|missense_variant'] 48285 21413 KDLEVITV True PC9_epitope_Rep2 915.52769805815 915.52660993586 87.836 2 -0.4182269221200822 0.11257733372178712 0.9438714419765777 ['ENSG00000006607|ENST00000264042|FARP2', 'nc|ENSG00000006607|O94887-3|FARP2', 'FARP2|p.H590Qfs*52|1|0.12|ENSG00000006607|chr2:241463425-241463426|-/A|frameshift_variant', 'nc|ENSG00000006607|O94887-2|FARP2'] 17038 4139 EGLYPYPP True H1975_Epitope_Rep2 934.4436340810198 934.44252993586 21.013 2 -0.4182382288070884 0.11259254181519057 0.9438714419765777 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2', 'nc|ENSG00000111077|Q63HR2-2|TNS2'] 114929 9168 TTFAANLLTL True PC9_epitope_Rep4 1063.59136094387 1063.59026993586 42.858 2 -0.418269208099469 0.11262488646684832 0.9438714419765777 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR', 'ATR|p.S621R|1|0.15|ENSG00000175054|chr3:142558646-142558646|G/T|missense_variant'] 63097 18218 LNNAVSINL True PC9_epitope_Rep2 956.52909504048 956.52798993586 75.392 2 -0.41829736524979744 0.11264009322411489 0.9438714419765777 ['ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.V747Gfs*14|1|0.2|ENSG00000121871|chr3:165188591-165188592|-/C|frameshift_variant', 'SLITRK3|p.G109V|1|0.25|ENSG00000121871|chr3:165190505-165190505|C/A|missense_variant', 'SLITRK3|p.K136Efs*11|1|0.17|ENSG00000121871|chr3:165190410-165190425|TGAAGACATCTAGTTT/-|frameshift_variant'] 63163 7665 LNSLAQEILP True H1975_Epitope_Rep1 1096.61282466444 1096.61172993586 34.455 2 -0.4183602020815898 0.11267243595236055 0.9438714419765777 ['AluJr_dup39110|chr8:143020241-143020533:-|1.0404728964887529|0.0573479168884429|4.18|502.0|15|2|anti-sense'] 20372 21545 EPIPYEFMA True PC9_epitope_Rep2 1095.49468367771 1095.4935899358602 88.341 2 -0.41840799940692547 0.11272191377064912 0.9438714419765777 ['ENST00000483765.5_1_13:27827977-27830662:+|nuORF', 'ENSG00000122026|ENST00000311549|RPL21'] 79236 6870 PGGGRWLPAG True PC9_epitope_Rep1 966.5035489989798 966.50244993586 31.23 2 -0.4184278250675276 0.11277138989324331 0.9438714419765777 ['ENST00000282096.8_1_11:14665308-14793517:+|nuORF'] 9161 13573 AVNGNIEDAVT True PC9_epitope_Rep5 1101.5302172392899 1101.52912993586 57.232 2 -0.4186449805596889 0.11283413296778616 0.9438714419765777 ['ENSG00000153201|ENST00000283195|RANBP2', 'nc|ENSG00000183054|Q99666-2|RGPD5', 'ENSG00000183054|ENST00000329516|RGPD6', 'ENSG00000169629|ENST00000302558|RGPD8', 'ENSG00000015568|ENST00000016946|RGPD5'] 12239 5367 DIQREEHHGDP True NCI_RA007_Epitope_Rep2 1331.58544069963 1331.58379490379 25.494 3 -0.4187020223150152 0.11283413296778616 0.9438714419765777 ['ENST00000486812.5_1_21:43231104-43231167:-|nuORF'] 27957 8204 FQSDSDSFNP True H1975_Epitope_Rep1 1142.45163256542 1142.45052993586 36.499 2 -0.4187265931009715 0.11283413296778616 0.9438714419765777 ['nc|ENSG00000033122|Q96NW7-2|LRRC7', 'nc|ENSG00000033122|Q96NW7|LRRC7', 'ENSG00000033122|ENST00000651989|LRRC7', 'ENST00000415775.2_1_1:70225872-70503822:+|nuORF', 'LRRC7|p.N814Kfs*21|1|0.12|ENSG00000033122|chr1:70038263-70038264|-/AA|frameshift_variant'] 56131 14390 LDMCSSHP True PC9_epitope_Rep3 888.3469738982001 888.34586993586 60.442 2 -0.41877888514205464 0.1128474007059388 0.9438714419765777 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 27388 10777 FNDGNAAVV True PC9_epitope_Rep1 905.4242956187699 905.42318993586 46.341 2 -0.4188387935818097 0.1128474007059388 0.9438714419765777 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 126277 11129 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48506993586 47.797 2 -0.4189095758062321 0.11291400373524321 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 44265 18407 ILVFPTSSTI True PC9_epitope_Rep2 1076.6117620352802 1076.6106699358602 76.132 2 -0.4189592593524771 0.1129463367829484 0.9438714419765777 ['ENSG00000123066|ENST00000281928|MED13L'] 119342 10405 VEMMHMAAP True PC9_epitope_Rep2 1015.42892970035 1015.42782993586 45.346 2 -0.41899676264997465 0.11295959976698763 0.9438714419765777 ['ENSG00000115286|ENST00000233627|NDUFS7', 'ENST00000538662.5_1_19:1383907-1391085:+|nuORF', 'ENST00000543289.5_1_19:1388688-1391085:+|nuORF', 'ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF'] 116724 9181 TYLDIDELS True PC9_epitope_Rep4 1067.50227115595 1067.5011699358602 42.909 2 -0.41900256780443373 0.11295959976698763 0.9438714419765777 ['nc|ENSG00000180228|O75569-3|PRKRA', 'nc|ENSG00000180228|O75569-2|PRKRA', 'ENSG00000180228|ENST00000325748|PRKRA'] 14501 7793 DTWESLQK True PC9_epitope_Rep4 1005.47672511445 1005.47562993586 37.375 2 -0.4190642142328591 0.11296512026313986 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 117825 19291 VANSLPELL True PC9_epitope_Rep4 954.53859709502 954.53750993586 82.308 2 -0.41910374079631646 0.11296512026313986 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 49265 4819 KHEAMITDLEE True NCI_RA007_Epitope_Rep2 1314.61256696426 1314.6109349037902 23.369 3 -0.4191135394850771 0.11296512026313986 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9'] 92797 27056 RRKWRRWHLQG True H1975_Epitope_Rep2 1577.8916147532498 1577.88997490379 111.68 3 -0.4191215199050889 0.11296512026313986 0.9438714419765777 ['nc|ENSG00000114812|P32241-4|VIPR1', 'nc|ENSG00000114812|P32241-5|VIPR1', 'ENSG00000114812|ENST00000325123|VIPR1', 'nc|ENSG00000114812|P32241-2|VIPR1', 'ENST00000498102.1_1_3:42576287-42577770:+|nuORF', 'nc|ENSG00000114812|P32241-3|VIPR1'] 27392 10515 FNDGNAAVV True PC9_epitope_Rep2 905.4242956187699 905.42318993586 45.768 2 -0.41915216951276324 0.11296512026313986 0.9438714419765777 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 120556 7491 VGAAWPRRG True H1975_Epitope_Rep3 968.5304324531598 968.52932993586 33.795 2 -0.41916381510646644 0.11296512026313986 0.9438714419765777 ['ENST00000307602.8_1_8:42752083-42752287:+|nuORF'] 85232 6369 QKKKKKKKK True NCI_RA007_Epitope_Rep4 1170.8288463009796 1170.82720490379 31.101 3 -0.4192464447287322 0.11297838078596635 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 111276 19808 TLGVNPLTG True PC9_epitope_Rep5 870.4810822188999 870.47998993586 81.239 2 -0.4192694289910839 0.11297838078596635 0.9438714419765777 ['ENSG00000006695|ENST00000261643|COX10', 'nc|ENSG00000006695|Q12887-2|COX10'] 132119 19717 VYIQLVPEL True PC9_epitope_Rep6 1072.6168474157198 1072.61627496793 88.5 1 -0.41930862748652376 0.11299164040016445 0.9438714419765777 ['ENST00000262293.8_2_17:57262525-57262892:+|nuORF'] 57680 10405 LEMQMYGPP True H1975_Epitope_Rep1 1064.4670890308798 1064.46598993586 44.972 2 -0.4194189995406202 0.11299164040016445 0.9438714419765777 ['ENST00000480273.5_1_20:62318929-62319157:+|nuORF'] 85227 3763 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 19.277 3 -0.41946996299418077 0.11300683488360141 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 58952 18915 LFYDRILCDV True PC9_epitope_Rep3 1255.62709482959 1255.6254449037901 77.977 3 -0.4195174187925512 0.11301428522489808 0.9438714419765777 ['nc|ENSG00000037474|Q08J23-2|NSUN2', 'ENSG00000037474|ENST00000264670|NSUN2', 'nc|ENSG00000037474|Q08J23-3|NSUN2'] 112713 10589 TPHFSGLAA True PC9_epitope_Rep4 899.4501164437899 899.44900993586 48.473 2 -0.4195387074250415 0.11301428522489808 0.9438714419765777 ['ENSG00000178952|ENST00000313511|TUFM'] 96523 16977 SELLCYFIII True PC9_epitope_Rep3 1212.6464332918401 1212.6453299358602 70.462 2 -0.41954606205055983 0.11301428522489808 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 44309 3315 ILYPCHGWGP True NCI_RA007_Epitope_Rep2 1141.53788590237 1141.53625490379 17.559 3 -0.41955567275239974 0.11301428522489808 0.9438714419765777 ['GALNT17|p.L576Pfs*19|1|0.28|ENSG00000185274|chr7:71712069-71712070|-/G|frameshift_variant', 'ENSG00000185274|ENST00000333538|GALNT17'] 85222 1252 QKKKKKKKK True H1975_Epitope_Rep2 1170.8288463009796 1170.82720490379 6.782 3 -0.41961215657682926 0.11301428522489808 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 70198 22160 LYLPFSLTF True PC9_epitope_Rep6 1099.59538369515 1099.5942899358602 98.179 2 -0.4196741638707715 0.11304466977254042 0.9438714419765777 ['ENST00000336184.6_1_1:211546143-211546227:+|nuORF'] 480 15636 AANPLVVG True PC9_epitope_Rep3 739.42283906679 739.42229496793 65.29 1 -0.41969743471266563 0.11304466977254042 0.9438714419765777 ['ENSG00000092051|ENST00000356300|JPH4'] 116021 17979 TVRDVKLL True PC9_epitope_Rep5 942.5862159937799 942.58510993586 74.174 2 -0.41973504378109755 0.11305598849058866 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'ENST00000540191.1_1_12:122012416-122017978:-|nuORF', 'KDM2B|p.I399Mfs*82|1|0.34|ENSG00000089094|chr12:121510014-121510017|GTCT/-|frameshift_variant', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 85624 15957 QLPEYHHKK True H1975_Epitope_Rep3 1178.6196413803798 1178.61854993586 66.833 2 -0.4197391282272784 0.11305598849058866 0.9438714419765777 ['PTPN14|p.Q691E|2|0.25|ENSG00000152104|chr1:214383784-214383784|G/C|missense_variant'] 105263 13186 STTETDIFEL True PC9_epitope_Rep1 1154.5342995602198 1154.5332099358602 55.584 2 -0.4197480786812144 0.11305598849058866 0.9438714419765777 ['ENSG00000145309|ENST00000273936|CABS1'] 60506 21233 LINRPILVL True PC9_epitope_Rep1 1049.6961007959299 1049.69500993586 86.497 2 -0.41987973833723946 0.11308830581626361 0.9438714419765777 ['ENSG00000186765|ENST00000417245|FSCN2', 'nc|ENSG00000186765|O14926-2|FSCN2'] 85226 3660 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 18.885 3 -0.41995589453085364 0.11309962151701461 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 33902 7303 GLYGSLFP True H1975_Epitope_Rep3 852.43815477776 852.43704993586 33.066 2 -0.4199688917472134 0.11309962151701461 0.9438714419765777 ['SLC26A7|p.I89M|1|0.22|ENSG00000147606|chr8:91289209-91289209|T/G|missense_variant', 'ENSG00000147606|ENST00000276609|SLC26A7', 'nc|ENSG00000147606|Q8TE54-2|SLC26A7'] 110989 15642 TLDEDLERW True H1975_Epitope_Rep2 1175.5458673034298 1175.5447699358601 65.323 2 -0.4199689726520088 0.11309962151701461 0.9438714419765777 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14', 'ENSG00000121101|ENST00000349033|TEX14'] 19293 11337 ELLRWKEDP True PC9_epitope_Rep1 1184.61897267404 1184.6178699358602 48.487 2 -0.420006895715101 0.11311287311835323 0.9438714419765777 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1', 'ENST00000606296.1_1_3:18393447-18393747:-|nuORF', 'ENST00000467628.1_1_3:18393447-18419817:-|nuORF'] 34426 19631 GPWTNQLL True PC9_epitope_Rep3 927.48141657207 927.48030993586 80.749 2 -0.42002481780246265 0.11311287311835323 0.9438714419765777 ['ENSG00000179761|ENST00000323372|PIPOX', 'ENST00000580241.5_1_17:27280417-27383320:+|nuORF', 'ENST00000583215.5_1_17:27338116-27383320:+|nuORF'] 69992 21110 LYFIVIYIF True NCI_RA007_Epitope_Rep4 1189.6787193962898 1189.67762993586 91.529 2 -0.42014852452212686 0.1131623111963558 0.9438714419765777 ['ENST00000305366.7_1_3:149087371-149087659:-|nuORF'] 45477 14540 ISELSGKVL True PC9_epitope_Rep1 944.5542471591599 944.55314993586 60.752 2 -0.42017845737052095 0.11319268443044044 0.9438714419765777 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-3|MTCL1', 'nc|ENSG00000168502|Q9Y4B5|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-2|MTCL1'] 6467 8330 APTAITEA True PC9_epitope_Rep3 772.3966838886 772.39613496793 37.013 1 -0.4201810567864482 0.11319268443044044 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 6257 17594 APRNRFSL True PC9_epitope_Rep6 959.5300980999899 959.52900993586 80.317 2 -0.42020529177346777 0.11320787026730825 0.9438714419765777 ['ENST00000540643.5_2_22:31892283-31892502:+|nuORF'] 13010 17788 DLQMEVVTL True PC9_epitope_Rep3 1046.53179746242 1046.5307099358602 73.623 2 -0.42030895242589356 0.11325536396171167 0.9438714419765777 ['ENST00000468586.5_1_1:62149184-62190652:-|nuORF'] 59046 4946 LGCCSVLCSDK True NCI_RA007_Epitope_Rep3 1126.48208747202 1126.48045490379 26.451 3 -0.4203336637804637 0.11325536396171167 0.9438714419765777 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 38907 9122 HIKRHYHKKFW True NCI_RA007_Epitope_Rep2 1578.86841969718 1578.86677490379 40.088 3 -0.42036270334836096 0.11326860841423948 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'nc|ENSG00000115339|Q14435-2|GALNT3'] 108763 14489 TEPELIQV True PC9_epitope_Rep4 927.4913125494298 927.49020993586 63.643 2 -0.4203765139516375 0.11326860841423948 0.9438714419765777 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5'] 43679 4170 IINGKVGG True PC9_epitope_Rep4 756.4493881677998 756.44828993586 22.391 2 -0.42052912525696445 0.1133009143522482 0.9438714419765777 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 136071 11196 YFYKYFRDERR True NCI_RA007_Epitope_Rep1 1641.8052103039297 1641.8041099358602 47.55 2 -0.4205933488099968 0.11333321918394602 0.9438714419765777 ['ENSG00000174885|ENST00000534750|NLRP6', 'nc|ENSG00000174885|P59044|NLRP6'] 114473 7113 TSETFPEAYKP True NCI_RA007_Epitope_Rep1 1268.5924831426796 1268.5908449037902 31.658 3 -0.42066783640213234 0.11334451939869192 0.9438714419765777 ['ENSG00000168421|ENST00000381799|RHOH'] 126971 10770 VPVSRSLGPLG True NCI_RA007_Epitope_Rep4 1080.6291434349198 1080.6280499358602 48.275 2 -0.42071126323900077 0.11334451939869192 0.9438714419765777 ['ENSG00000265203|ENST00000584701|RBP3'] 10112 13574 AYWTPEDTVP True PC9_epitope_Rep3 1177.5291546101298 1177.52804993586 57.267 2 -0.4207116740688307 0.11334451939869192 0.9438714419765777 ['ENST00000600775.5_1_19:58740851-58758098:+|nuORF'] 9577 8270 AYATHPFKF True NCI_RA007_Epitope_Rep5 1080.53926580136 1080.5381699358602 38.489 2 -0.42079472860915645 0.11337682127142294 0.9438714419765777 ['nc|ENSG00000111912|Q8NI08-5|NCOA7', 'nc|ENSG00000111912|Q8NI08-7|NCOA7', 'nc|ENSG00000111912|Q8NI08-2|NCOA7', 'ENSG00000111912|ENST00000392477|NCOA7'] 95593 15222 SATARAFLV True PC9_epitope_Rep5 934.5236157372199 934.52250993586 63.56 2 -0.4208416482049523 0.11338617726113231 0.9438714419765777 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 103128 16727 SQLTGVAAI True PC9_epitope_Rep5 858.4810822188999 858.47998993586 69.347 2 -0.42087619919044145 0.11338617726113231 0.9438714419765777 ['ENSG00000152684|ENST00000274311|PELO'] 110516 12927 TIQNPSNV True PC9_epitope_Rep3 871.43994568291 871.43884993586 54.748 2 -0.4208842749378681 0.11338617726113231 0.9438714419765777 ['ENSG00000094755|ENST00000265294|GABRP'] 130088 3979 VTQQSEKHLEK True NCI_RA007_Epitope_Rep2 1325.6939285194496 1325.6922749037901 20.114 3 -0.4208964193816607 0.11338617726113231 0.9438714419765777 ['nc|ENSG00000143493|Q9NVH2-3|INTS7', 'nc|ENSG00000143493|Q9NVH2-2|INTS7', 'ENSG00000143493|ENST00000366994|INTS7'] 111204 10949 TLFPQNPNL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 47.435 2 -0.4209543629588508 0.11341459239223474 0.9438714419765777 ['ENSG00000120658|ENST00000690772|ENOX1', 'ENST00000482207.1_1_13:43933927-43935475:-|nuORF'] 11212 8413 DELSRQGCTV True H1975_Epitope_Rep3 1106.50262259246 1106.5015299358602 37.344 2 -0.4209640250616676 0.11341459239223474 0.9438714419765777 ['ENSG00000124588|ENST00000380455|NQO2'] 11138 9920 DEESVDSETL True PC9_epitope_Rep5 1122.45644316234 1122.45534993586 43.13 2 -0.4210413732944084 0.11341459239223474 0.9438714419765777 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'JAKMIP1|p.T470Rfs*22|1|0.15|ENSG00000152969|chr4:6064903-6064903|T/-|frameshift_variant', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-6|JAKMIP1', 'nc|ENSG00000152969|Q96N16-5|JAKMIP1'] 70249 16918 LYMRIRDNW True PC9_epitope_Rep1 1265.6339115455298 1265.63227490379 69.9 3 -0.42110446462481677 0.11345818069773016 0.9438714419765777 ['ENSG00000100596|ENST00000216484|SPTLC2', 'ENST00000557566.1_1_14:78045296-78063654:-|nuORF', 'SPTLC3|p.R116T|1|0.31|ENSG00000172296|chr20:13072299-13072299|G/C|missense_variant', 'ENSG00000172296|ENST00000399002|SPTLC3'] 110620 14868 TITLQLSTLTK True NCI_RA007_Epitope_Rep1 1217.7231033894097 1217.7220099358601 61.892 2 -0.42111087244252526 0.11345818069773016 0.9438714419765777 ['ENST00000521130.1_1_5:168547122-168727722:-|nuORF'] 125285 19974 VLRREREVEWR True PC9_epitope_Rep1 1526.8429927949796 1526.84134490379 81.656 3 -0.42111806806861896 0.11345818069773016 0.9438714419765777 ['ZBED2|p.A166E|1|0.2|ENSG00000177494|chr3:111593705-111593705|G/T|missense_variant'] 71049 4826 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 23.689 2 -0.42113174106276885 0.11345818069773016 0.9438714419765777 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 77824 7198 PAFKDRVP True PC9_epitope_Rep2 928.5130510535198 928.51194993586 33.078 2 -0.4211591984369639 0.11346947159411855 0.9438714419765777 ['ENSG00000130477|ENST00000519716|UNC13A'] 79947 15717 PISDTIIP True H1975_Epitope_Rep2 854.4749342092999 854.47382993586 65.623 2 -0.4211731665379366 0.11346947159411855 0.9438714419765777 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 122337 7837 VGSAGVTVVI True NCI_RA007_Epitope_Rep3 900.5280324113199 900.52692993586 37.95 2 -0.42118174045718804 0.11346947159411855 0.9438714419765777 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000518968.1_1_8:50652851-50653445:-|nuORF'] 73198 8732 NEEYSLWVYQC True H1975_Epitope_Rep3 1432.5969169001198 1432.5958099358602 38.591 2 -0.4213550592722388 0.11351693682282663 0.9438714419765777 ['ENST00000460720.5_1_2:9546965-9548358:-|nuORF', 'ENST00000490426.5_1_2:9546965-9563580:-|nuORF', 'ENSG00000119185|ENST00000355346|ITGB1BP1'] 140085 19550 YVPDLDRILL True PC9_epitope_Rep2 1215.68632395787 1215.6852299358602 80.582 2 -0.4213652042907692 0.11351693682282663 0.9438714419765777 ['ENST00000303277.6_1_4:1718369-1718675:-|nuORF'] 35461 11476 GTELPPVSP True H1975_Epitope_Rep1 895.46509780159 895.46400993586 49.125 2 -0.42148452726589797 0.11360057510612077 0.9438714419765777 ['ENST00000537045.5_1_22:19025468-19025981:-|nuORF'] 57509 18358 LEKQACEL True PC9_epitope_Rep5 932.4637179025999 932.46262993586 75.631 2 -0.4215327048191652 0.11363091774210111 0.9438714419765777 ['ENSG00000127578|ENST00000319070|WFIKKN1'] 32900 10850 GINEQQTL True PC9_epitope_Rep3 901.45051036661 901.44940993586 46.709 2 -0.4215710006623952 0.11363091774210111 0.9438714419765777 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B', 'ENST00000467042.1_1_2:99182504-99185377:+|nuORF', 'nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A'] 68574 11060 LTYEEEEVA True H1975_Epitope_Rep2 1081.4815357113698 1081.48042993586 47.573 2 -0.42184454583781256 0.11372971862805505 0.9438714419765777 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B', 'ZBTB7B|p.H229Y|1|0.27|ENSG00000160685|chr1:155015345-155015345|C/T|missense_variant'] 44302 6742 ILYFSCNPP True H1975_Epitope_Rep3 1052.50010341132 1052.4990099358602 30.888 2 -0.42187038459172355 0.11372971862805505 0.9438714419765777 ['ENST00000393229.3_1_9:135117391-135118432:+|nuORF'] 37994 10134 HEHEELSL True PC9_epitope_Rep5 992.4563240230399 992.45522993586 43.965 2 -0.42190993802544696 0.11374294027040904 0.9438714419765777 ['ENSG00000216937|ENST00000639629|CCDC7', 'nc|ENSG00000216937|Q96M83-2|CCDC7', 'nc|ENSG00000216937|Q96M83-4|CCDC7', 'nc|ENSG00000216937|Q96M83-3|CCDC7', 'nc|ENSG00000216937|Q96M83-5|CCDC7'] 19129 10414 ELINAAKG True PC9_epitope_Rep1 814.45486747106 814.45376993586 44.942 2 -0.4219184865147384 0.11374294027040904 0.9438714419765777 ['ENSG00000083845|ENST00000196551|RPS5'] 19528 19491 ELQQLTLTGFG True H1975_Epitope_Rep1 1205.62920300457 1205.62867496793 81.168 1 -0.4220924695398801 0.11379038882803943 0.9438714419765777 ['ENST00000591340.5_1_19:37039208-37045651:-|nuORF'] 99882 10440 SLHLRYNSLR True H1975_Epitope_Rep1 1257.6942033029702 1257.69310993586 45.112 2 -0.4221601554260909 0.11379038882803943 0.9438714419765777 ['LRRTM3|p.S166Y|1|0.13|ENSG00000198739|chr10:66927413-66927413|C/A|missense_variant'] 78231 16961 PAPVILAAP True PC9_epitope_Rep6 847.51673945163 847.51564993586 77.786 2 -0.42227793891658555 0.11385689593209317 0.9438714419765777 ['ENST00000377680.3_1_9:38621281-38621927:+|nuORF', 'ENST00000484285.2_1_9:38620779-38621927:+|nuORF'] 129398 19909 VTEGVIVPE True PC9_epitope_Rep4 941.5069626135698 941.50641496793 84.714 1 -0.4223869002721264 0.1139062874353972 0.9438714419765777 ['nc|ENSG00000147180|Q9Y462|ZNF711', 'nc|ENSG00000147180|Q9Y462-2|ZNF711', 'ENSG00000147180|ENST00000674551|ZNF711'] 63794 11437 LPSLLTSDAAP True H1975_Epitope_Rep1 1083.58119018299 1083.58008993586 48.972 2 -0.4225549307403563 0.11395177712750483 0.9438714419765777 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 66339 9789 LSQRFTFSP True H1975_Epitope_Rep1 1081.55564414149 1081.5545499358602 42.581 2 -0.4225622797161642 0.11395177712750483 0.9438714419765777 ['nc|ENSG00000082175|P06401-4|PGR', 'nc|ENSG00000082175|P06401-3|PGR', 'nc|ENSG00000082175|P06401-2|PGR', 'ENSG00000082175|ENST00000325455|PGR'] 69941 18620 LYEANGQAVP True PC9_epitope_Rep1 1060.5189242795998 1060.5178299358602 76.41 2 -0.42259336010430454 0.11395177712750483 0.9438714419765777 ['nc|ENSG00000004487|O60341|KDM1A'] 100848 8935 SLSEAKMELRR True NCI_RA007_Epitope_Rep2 1318.7027193813399 1318.7016299358602 39.38 2 -0.42259647774078296 0.11396693932030529 0.9438714419765777 ['nc|ENSG00000164989|Q6TFL3-3|CCDC171', 'ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'ENST00000470191.5_1_9:15845666-15971831:+|nuORF'] 3179 7499 AGELALEQGP True H1975_Epitope_Rep1 983.4923751785898 983.49126993586 33.843 2 -0.42265035597453326 0.1139801505817933 0.9438714419765777 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENSG00000090565|ENST00000262305|RAB11FIP3'] 14497 8697 DTWESLQK True PC9_epitope_Rep1 1005.47672511445 1005.47562993586 38.293 2 -0.42267970445119046 0.1139801505817933 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 100026 10053 SLKEKEHNKEP True PC9_epitope_Rep3 1337.6939285194499 1337.6922749037901 43.625 3 -0.4227684479622853 0.11402563181219308 0.9438714419765777 ['ENSG00000153914|ENST00000334121|SREK1', 'nc|ENSG00000153914|Q8WXA9|SREK1', 'ENST00000519205.1_1_5:65473318-65474693:+|nuORF', 'ENST00000522214.1_1_5:65470720-65474693:+|nuORF'] 41438 5135 IAVETGKNSES True NCI_RA007_Epitope_Rep5 1133.5564319871298 1133.55532993586 26.448 2 -0.4227761793748353 0.11402563181219308 0.9438714419765777 ['ENST00000496445.5_1_10:114207101-114298148:+|nuORF'] 16956 9746 EGGGLTLPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43833496793 45.402 1 -0.42280349847204785 0.11402563181219308 0.9438714419765777 ['FMN2|p.V754G|1|0.29|ENSG00000155816|chr1:240207073-240207073|T/G|missense_variant'] 33353 8320 GLEAQVKPEP True H1975_Epitope_Rep1 1066.56587447202 1066.56476993586 36.934 2 -0.4228063625458068 0.11403883993498161 0.9438714419765777 ['ENSG00000170379|ENST00000684770|TCAF2', 'nc|ENSG00000170379|A6NFQ2-2|TCAF2', 'ENST00000494978.5_1_7:143510715-143533742:-|nuORF'] 123923 15144 VKKGQQIYL True PC9_epitope_Rep2 1075.6389798426299 1075.6378899358601 63.51 2 -0.42283121704394844 0.11403883993498161 0.9438714419765777 ['OTOR|p.V68L|1|0.07|ENSG00000125879|chr20:16748953-16748953|G/T|missense_variant'] 123808 15296 VITPVLLHF True NCI_RA007_Epitope_Rep3 1037.62735252977 1037.6262499358602 67.72 2 -0.4228550210963468 0.11405009581166164 0.9438714419765777 ['nc|ENSG00000175606|Q9BUB7-2|TMEM70', 'ENSG00000175606|ENST00000312184|TMEM70'] 23393 10682 EVVEEGAKEAR True H1975_Epitope_Rep1 1215.6095301891498 1215.6084299358602 46.047 2 -0.42291900897566653 0.11405009581166164 0.9438714419765777 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 41887 13771 IDWNNPAII True PC9_epitope_Rep6 1054.54474510462 1054.54364993586 64.772 2 -0.42294917349623184 0.11405009581166164 0.9438714419765777 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 5466 15665 ALYQTKYEEL True PC9_epitope_Rep4 1256.6288686514 1256.6272349037902 68.183 3 -0.4231329108205748 0.11413368919913086 0.9438714419765777 ['CON__ENSEMBL:ENSBTAP00000038253'] 116945 10581 TYPIKTPTF True NCI_RA007_Epitope_Rep3 1066.5698972233001 1066.5688099358601 48.671 2 -0.42314552101988645 0.11414103397543368 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 121213 12886 VGGPEIEVG True PC9_epitope_Rep6 855.4337976733099 855.43270993586 61.092 2 -0.4231541856267712 0.11414103397543368 0.9438714419765777 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 19498 7310 ELQIFDMALSP True H1975_Epitope_Rep1 1262.62167509598 1262.6205699358602 33.125 2 -0.42316955455110067 0.11414103397543368 0.9438714419765777 ['ENST00000493315.1_1_2:63631156-63711794:-|nuORF', 'nc|ENSG00000143951|O95876-3|WDPCP', 'nc|ENSG00000143951|O95876-2|WDPCP', 'ENST00000409835.5_1_2:63587012-63815411:-|nuORF', 'ENSG00000143951|ENST00000272321|WDPCP'] 69871 16801 LYAPYSTHF True PC9_epitope_Rep1 1097.51819600361 1097.51767496793 69.449 1 -0.42317178487071544 0.11414103397543368 0.9438714419765777 ['ENSG00000013588|ENST00000014914|GPRC5A'] 407 24166 AALLQDLPL True H1975_Epitope_Rep3 952.5593325396 952.55822993586 100.69 2 -0.42318359937947736 0.11414103397543368 0.9438714419765777 ['MLT1B_dup948|chr1:201401334-201401734:-|1.0755469260710702|0.1940662173317227|2.47|502.0|26|3|anti-sense'] 106768 17396 SYFSFWWWWWK True PC9_epitope_Rep6 1707.7663056140698 1707.76465490379 79.529 3 -0.4232096316747184 0.11415423566443136 0.9438714419765777 ['ENST00000300134.7_1_12:57504946-57505147:-|nuORF'] 29191 17555 FVALNYLTI True PC9_epitope_Rep1 1052.59063266788 1052.5895299358601 72.317 2 -0.42321673939619475 0.11415423566443136 0.9438714419765777 ['ENST00000345016.9_1_19:2101821-2102175:-|nuORF'] 10228 16128 CFFRYRRDLLR True PC9_epitope_Rep4 1543.8194208994298 1543.81777490379 69.975 3 -0.4232576800842233 0.11416938946576116 0.9438714419765777 ['ADAR|p.S1170F|1|0.29|ENSG00000160710|chr1:154584978-154584978|G/A|missense_variant'] 57089 16429 LEELKKQQEKE True NCI_RA007_Epitope_Rep1 1400.7511090423998 1400.7500099358601 68.019 2 -0.4232787449305436 0.11418454274864005 0.9438714419765777 ['nc|ENSG00000135315|Q5TB80-2|CEP162', 'ENSG00000135315|ENST00000403245|CEP162'] 65540 17197 LSGARVYVL True PC9_epitope_Rep2 976.5705659296399 976.56946993586 71.407 2 -0.42336537340468383 0.11419969551309465 0.9438714419765777 ['ENST00000316715.8_1_X:13798007-13801499:-|nuORF'] 140568 13903 YYLPYYKRERN True PC9_epitope_Rep5 1563.78341223019 1563.78175490379 58.498 3 -0.42338012873349157 0.11420312660349605 0.9438714419765777 ['ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant'] 38091 4233 HENNNGQAAF True NCI_RA007_Epitope_Rep3 1100.4635346618 1100.4624299358602 23.322 2 -0.4234192783027474 0.11420312660349605 0.9438714419765777 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 69191 13577 LVMFQRRYYKP True H1975_Epitope_Rep3 1499.8071248802298 1499.8060299358601 57.507 2 -0.4234308002119596 0.11420312660349605 0.9438714419765777 ['ENSG00000099194|ENST00000370355|SCD'] 106943 11235 SYLDKVQAL True NCI_RA007_Epitope_Rep5 1035.5600608155898 1035.5589699358602 49.855 2 -0.42343723524628 0.11420312660349605 0.9438714419765777 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 116184 12418 TVTLWMSL True PC9_epitope_Rep3 949.4942897548899 949.49318993586 52.795 2 -0.42359170079848496 0.11420312660349605 0.9438714419765777 ['ENSG00000171714|ENST00000324559|ANO5', 'ANO5|p.L845*|1|0.27|ENSG00000171714|chr11:22279553-22279553|T/-|frameshift_variant'] 53117 11213 KSGLFTGGSL True PC9_epitope_Rep2 965.5181960036099 965.51708993586 48.459 2 -0.4236358524700739 0.11420312660349605 0.9438714419765777 ['ENSG00000197629|ENST00000361050|MPEG1'] 129540 11366 VTGAEEDRARF True H1975_Epitope_Rep1 1249.6051135150499 1249.6040099358602 48.697 2 -0.4236560906716649 0.11420312660349605 0.9438714419765777 ['ENSG00000088833|ENST00000216879|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-5|NSFL1C', 'nc|ENSG00000088833|Q9UNZ2-4|NSFL1C', 'ENST00000478168.1_1_20:1444972-1447445:-|nuORF', 'ENST00000487086.1_1_20:1438843-1447469:-|nuORF'] 83499 5982 QDIEKGWAKP True H1975_Epitope_Rep3 1170.6033226098998 1170.6022299358601 28.021 2 -0.42370422446195155 0.11421827697675611 0.9438714419765777 ['nc|ENSG00000174226|Q8N9S9-2|SNX31', 'ENSG00000174226|ENST00000311812|SNX31'] 86210 9542 QPVSGTQVV True PC9_epitope_Rep3 913.48689587533 913.4863449679301 41.651 1 -0.4238327687736718 0.11430184032291167 0.9438714419765777 ['nc|ENSG00000066136|Q13952-4|NFYC', 'nc|ENSG00000066136|Q13952-6|NFYC', 'ENSG00000066136|ENST00000447388|NFYC', 'nc|ENSG00000066136|Q13952-5|NFYC', 'ENST00000424419.6_1_1:41157373-41232429:+|nuORF', 'nc|ENSG00000066136|Q13952-7|NFYC', 'nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC'] 98201 17367 SIDVFEDYI True PC9_epitope_Rep5 1099.5073565363898 1099.50624993586 71.802 2 -0.42400395353092984 0.114385400810686 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 95821 9851 SDGVAVLKV True PC9_epitope_Rep6 886.5123823471799 886.51128993586 48.37 2 -0.424115958660928 0.11441569324964512 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 112642 10239 TPEQIEKIY True H1975_Epitope_Rep2 1119.5811901829898 1119.58008993586 44.39 2 -0.4241174223718227 0.11441569324964512 0.9438714419765777 ['ENSG00000086288|ENST00000199447|NME8'] 88095 18225 QVVSFLHTV True PC9_epitope_Rep3 1028.5654805492 1028.5643899358602 75.315 2 -0.42418385236747697 0.11443083869202353 0.9438714419765777 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'ATRX|p.L1613F|1|0.32|ENSG00000085224|chrX:77633683-77633683|C/A|missense_variant', 'ATRX|p.L1612V|1|0.48|ENSG00000085224|chrX:77633688-77633688|G/C|missense_variant'] 17969 15968 EIFPSKLSL True PC9_epitope_Rep2 1032.5855472874398 1032.5844499358602 66.674 2 -0.42430189786200034 0.1144801874369367 0.9438714419765777 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1'] 137839 16799 YPGLQITDSY True H1975_Epitope_Rep2 1155.54480467427 1155.54370993586 69.865 2 -0.4243585441503542 0.11451243287615008 0.9438714419765777 ['ENSG00000197953|ENST00000356517|AADACL2'] 67021 13094 LTANPERCYP True PC9_epitope_Rep2 1162.54409348162 1162.54243490379 55.644 3 -0.4243744261026125 0.11452561734728778 0.9438714419765777 ['ENST00000432959.1_1_2:96931033-96931616:-|nuORF'] 97395 18385 SGEAISFFTG True PC9_epitope_Rep5 1014.46582607758 1014.4652749679301 75.736 1 -0.42438724852078563 0.11452561734728778 0.9438714419765777 ['ENSG00000121270|ENST00000356608|ABCC11', 'nc|ENSG00000121270|Q96J66-2|ABCC11', 'ENST00000567385.5_1_16:48244807-48265838:-|nuORF'] 59057 8314 LGDGSGVLNNR True H1975_Epitope_Rep3 1100.5574350466402 1100.55632993586 36.963 2 -0.4244646871031637 0.11454075961489132 0.9438714419765777 ['ADGRG3|p.G313Vfs*7|1|0.55|ENSG00000182885|chr16:57683986-57683986|G/-|frameshift_variant', 'ENSG00000182885|ENST00000333493|ADGRG3'] 14495 6344 DTWESLQK True NCI_RA007_Epitope_Rep5 1005.47672511445 1005.47562993586 31.077 2 -0.42450822986286424 0.11455394244087622 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 42692 14762 IEVWKHKN True PC9_epitope_Rep5 1052.5767139392399 1052.57560993586 61.781 2 -0.42452020369528753 0.11455394244087622 0.9438714419765777 ['ENST00000557005.1_1_14:64490935-64514966:+|nuORF'] 31165 10941 GDENINVLDL True H1975_Epitope_Rep1 1100.5349682665599 1100.53437496793 47.048 1 -0.42455766095310205 0.11458422393597921 0.9438714419765777 ['ENSG00000174145|ENST00000309447|NWD2'] 22775 8536 EVDECHMDP True H1975_Epitope_Rep2 1073.3793962252898 1073.37828993586 37.788 2 -0.4245718397050498 0.11458422393597921 0.9438714419765777 ['ENSG00000171094|ENST00000389048|ALK'] 28698 18759 FSTTVIQNV True PC9_epitope_Rep1 1007.5287606873098 1007.52817496793 76.945 1 -0.4247217620828489 0.11465066174207449 0.9438714419765777 ['ENSG00000100554|ENST00000216442|ATP6V1D', 'ENST00000555335.1_1_14:67815736-67826415:-|nuORF', 'ATP6V1D|p.T122Ifs*2|1|0.21|ENSG00000100554|chr14:67345856-67345859|CCAG/-|frameshift_variant'] 124077 17573 VKRRRRWYFRV True NCI_RA007_Epitope_Rep5 1620.9589660370798 1620.9578699358601 74.38 2 -0.42477003827295673 0.11466383968264825 0.9438714419765777 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 23234 8523 EVQYLLNK True NCI_RA007_Epitope_Rep1 1005.5494961318898 1005.54838993586 37.153 2 -0.4247887985325379 0.11466383968264825 0.9438714419765777 ['HYOU1|p.E939Gfs*11|1|0.39|ENSG00000149428|chr11:119046582-119046583|-/C|frameshift_variant', 'HYOU1|p.L930Sfs*31|1|0.14|ENSG00000149428|chr11:119046610-119046610|G/-|frameshift_variant', 'ENSG00000149428|ENST00000617285|HYOU1'] 63158 9180 LNSEHEDV True PC9_epitope_Rep1 941.4090394774499 941.40794993586 40.161 2 -0.424792486594125 0.11467309533579538 0.9438714419765777 ['ENSG00000196911|ENST00000368564|KPNA5'] 129106 8100 VTAVSLPR True PC9_epitope_Rep6 841.5021520166499 841.50104993586 40.683 2 -0.4247991453610493 0.11467309533579538 0.9438714419765777 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 125209 17101 VLQMTWML True PC9_epitope_Rep2 1020.5136453004799 1020.51254993586 71.028 2 -0.42481038806201665 0.11467309533579538 0.9438714419765777 ['ENST00000471475.1_1_10:70666494-70666578:+|nuORF'] 80419 9261 PLKEEEYRKLR True H1975_Epitope_Rep3 1459.8147123584697 1459.81360993586 40.614 2 -0.4248272475214161 0.11467309533579538 0.9438714419765777 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 91845 5385 RPNDSRMLVA True PC9_epitope_Rep4 1157.59752603681 1157.59588490379 27.442 3 -0.42487385241089454 0.11470532920720135 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 116636 21109 TYIGQGYII True PC9_epitope_Rep5 1026.53859709502 1026.53807496793 86.261 1 -0.42491746848131356 0.11471850370142415 0.9438714419765777 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000489591.5_1_17:39969413-39975983:+|nuORF'] 107806 7377 TAPESQLHLPG True H1975_Epitope_Rep2 1148.5825871653199 1148.5814899358602 33.316 2 -0.42492209805547926 0.11471850370142415 0.9438714419765777 ['ENST00000380466.6_1_17:7530728-7531181:-|nuORF'] 77836 8451 PAGALPAAQ True PC9_epitope_Rep4 794.42865272322 794.42754993586 39.97 2 -0.4250231514529344 0.11473167729471903 0.9438714419765777 ['ENST00000332272.8_1_16:75513067-75513235:-|nuORF'] 17137 10308 EGVANGIEVY True H1975_Epitope_Rep3 1049.5029398622898 1049.5023749679299 44.703 1 -0.4250254620187265 0.11473167729471903 0.9438714419765777 ['ITIH3|p.P36R|1|0.17|ENSG00000162267|chr3:52795616-52795616|C/G|missense_variant', 'ITIH3|p.G210Efs*21|1|0.43|ENSG00000162267|chr3:52797894-52797894|G/-|frameshift_variant', 'nc|ENSG00000162267|Q06033-2|ITIH3', 'ENSG00000162267|ENST00000449956|ITIH3'] 12791 11972 DLILNDFVR True NCI_RA007_Epitope_Rep1 1103.59750895347 1103.59640993586 50.555 2 -0.4250722243505899 0.11474484998717839 0.9438714419765777 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000451871.1_1_13:42499863-42500601:+|nuORF'] 138559 7852 YRNRNWEK True PC9_epitope_Rep1 1164.57883919756 1164.57774993586 35.029 2 -0.4251133420736386 0.11474484998717839 0.9438714419765777 ['ENSG00000213471|ENST00000641754|TTLL13', 'nc|ENSG00000213471|A6NNM8|TTLL13'] 57011 15929 LEEEKQALI True PC9_epitope_Rep3 1071.58119018299 1071.58008993586 66.417 2 -0.42515872679398525 0.11475802177889464 0.9438714419765777 ['ENSG00000118997|ENST00000312428|DNAH7'] 8358 15379 ATLTQTLL True PC9_epitope_Rep1 859.5014833103099 859.50038993586 63.973 2 -0.4251623261075293 0.11475802177889464 0.9438714419765777 ['ENSG00000161638|ENST00000293379|ITGA5', 'ENST00000552564.5_1_12:54797354-54798257:-|nuORF'] 109287 12432 TGDTIALNIIK True NCI_RA007_Epitope_Rep2 1157.66558851329 1157.66448993586 52.967 2 -0.42521162253421924 0.1147882869792646 0.9438714419765777 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 108810 13750 TEQLMKHPFIR True H1975_Epitope_Rep1 1398.7441902704998 1398.74308993586 58.029 2 -0.42521474377883456 0.1147882869792646 0.9438714419765777 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 58250 6498 LETAAPAPRPY True NCI_RA007_Epitope_Rep5 1184.61897267404 1184.6178699358602 31.66 2 -0.4252335337307168 0.11481462489103123 0.9438714419765777 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 28295 17569 FRWWRRRWNPR True NCI_RA007_Epitope_Rep1 1714.9181638542595 1714.9170699358601 72.473 2 -0.425238858676875 0.11481462489103123 0.9438714419765777 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 74632 12805 NLEKCMSELWR True H1975_Epitope_Rep1 1407.66389134447 1407.66278993586 54.318 2 -0.42525172362971336 0.11481462489103123 0.9438714419765777 ['nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2', 'ENSG00000128298|ENST00000381669|BAIAP2L2'] 98527 20337 SILLKVVCV True PC9_epitope_Rep3 972.60417455704 972.60306993586 83.477 2 -0.4253405185258105 0.11481462489103123 0.9438714419765777 ['ENST00000295087.12_1_2:152659146-152659368:-|nuORF'] 83343 7022 QAPHEDAVV True PC9_epitope_Rep2 964.4614094034799 964.46030993586 32.413 2 -0.4253862340197626 0.11485608805633418 0.9438714419765777 ['nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000556716.5_1_14:21486897-21488105:-|nuORF'] 118428 6049 VDPGHPPAS True NCI_RA007_Epitope_Rep5 875.41373093507 875.41262993586 29.948 2 -0.4254093796965511 0.11485608805633418 0.9438714419765777 ['ENST00000487659.1_1_1:1342042-1342597:-|nuORF'] 126283 9089 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48506993586 45.042 2 -0.42542950080340297 0.11485608805633418 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 94051 5261 RVRRRKTRRER True H1975_Epitope_Rep1 1567.97199033227 1567.9708899358602 25.299 2 -0.4254471104538408 0.11485608805633418 0.9438714419765777 ['nc|ENSG00000188368|A6NJB7-2|PRR19', 'ENSG00000188368|ENST00000341747|PRR19'] 70704 9363 MDPFNHRIF True NCI_RA007_Epitope_Rep5 1175.5545985956699 1175.5535099358601 42.657 2 -0.42545421757917806 0.11485608805633418 0.9438714419765777 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 59998 5750 LHQGHRQRP True PC9_epitope_Rep5 1127.6060570049099 1127.60440490379 27.11 3 -0.42546975606559134 0.11490539916935856 0.9438714419765777 ['ENST00000377625.6_1_13:75900405-75901937:-|nuORF'] 66435 9627 LSRNRIRCLNP True PC9_epitope_Rep3 1340.745921606 1340.74426490379 41.981 3 -0.42554393619951064 0.11491856232161474 0.9438714419765777 ['ENSG00000220008|ENST00000698372|LINGO3'] 46525 5454 ITQIEHEVSSS True NCI_RA007_Epitope_Rep3 1228.5935457718401 1228.59244993586 28.465 2 -0.4255618224521584 0.11491856232161474 0.9438714419765777 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 52780 17424 KQQQQLVL True PC9_epitope_Rep2 983.5763795860697 983.57528993586 72.275 2 -0.4255752262560994 0.11493172457402628 0.9438714419765777 ['ENST00000393077.2_1_10:114575138-114575192:+|nuORF'] 27400 10767 FNDGNAAVV True PC9_epitope_Rep5 905.4242956187699 905.42318993586 46.407 2 -0.42557620838367605 0.11493172457402628 0.9438714419765777 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 71519 20013 MKRNRWLQMWR True H1975_Epitope_Rep1 1603.8340254177497 1603.8329299358602 83.287 2 -0.4256332284044745 0.11494292159409392 0.9438714419765777 ['ENST00000496445.5_1_10:114207222-114224375:+|nuORF'] 19721 12822 ELSLRWHL True PC9_epitope_Rep6 1052.57671393924 1052.57560993586 60.821 2 -0.42568427079749577 0.11494292159409392 0.9438714419765777 ['ENST00000446716.5_1_2:220075515-220081188:-|nuORF', 'nc|ENSG00000115657|Q9NP58-4|ABCB6', 'ENSG00000115657|ENST00000265316|ABCB6'] 3642 19161 AGQCINPYITV True PC9_epitope_Rep1 1177.58014463717 1177.5790499358602 78.498 2 -0.42569335520303503 0.11494292159409392 0.9438714419765777 ['ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 89925 12269 RFVEKYTEL True PC9_epitope_Rep2 1183.62372370131 1183.62262993586 52.502 2 -0.4258123152324169 0.11502443692539048 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 129810 16515 VTLDNVTL True PC9_epitope_Rep1 873.48074786573 873.47964993586 68.348 2 -0.42581850270143096 0.11502443692539048 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 122565 11029 VGTEAHLSL True PC9_epitope_Rep4 925.48689587533 925.48578993586 50.199 2 -0.42582479884082963 0.11503169693966475 0.9438714419765777 ['ENSG00000115318|ENST00000264094|LOXL3', 'LOXL3|p.A277Cfs*57|3|0.17|ENSG00000115318|chr2:74536796-74536797|-/C|frameshift_variant'] 138271 13335 YQVRNWLI True PC9_epitope_Rep1 1090.59236400338 1090.59126993586 56.151 2 -0.4258287913420727 0.11503169693966475 0.9438714419765777 ['ENST00000279488.7_1_12:89742839-89743004:-|nuORF'] 100792 6723 SLRRRGSSI True NCI_RA007_Epitope_Rep4 1030.59957464214 1030.59846993586 32.483 2 -0.4258290444278632 0.11503169693966475 0.9438714419765777 ['ENST00000327247.9_1_1:155210919-155214415:-|nuORF'] 62097 9162 LLNKSGPV True PC9_epitope_Rep4 826.4912529797799 826.49014993586 42.834 2 -0.4258891236744458 0.11503169693966475 0.9438714419765777 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF'] 45354 17785 ISDGANIINL True PC9_epitope_Rep5 1028.55022440788 1028.54912993586 73.427 2 -0.42593573466170354 0.11503169693966475 0.9438714419765777 ['PTCHD4|p.F810Sfs*25|1|0.13|ENSG00000244694|chr6:47878415-47878415|A/-|frameshift_variant', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 30796 5275 GAPLPLPQES True H1975_Epitope_Rep3 1007.52876068731 1007.52766993586 25.372 2 -0.4259617493779681 0.11504681839928918 0.9438714419765777 ['nc|ENSG00000044459|Q9NXG0|CNTLN', 'ENSG00000044459|ENST00000380647|CNTLN'] 117228 23140 TYVFNIIF True PC9_epitope_Rep5 1015.5378688190299 1015.53676993586 93.996 2 -0.4261805297633199 0.11514540546082083 0.9438714419765777 ['ENSG00000121743|ENST00000241125|GJA3'] 65861 13893 LSKTESISV True PC9_epitope_Rep5 962.52842633414 962.5273299358599 58.459 2 -0.4262012850545508 0.11514540546082083 0.9438714419765777 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 37995 4845 HEHEQENELR True NCI_RA007_Epitope_Rep4 1319.5854406996298 1319.58379490379 25.074 3 -0.42625335931403846 0.11515658904132994 0.9438714419765777 ['ENSG00000135090|ENST00000392533|TAOK3', 'TAOK3|p.T656*|1|0.79|ENSG00000135090|chr12:118161955-118161964|CTCGGGTGGA/-|frameshift_variant'] 83593 18533 QDTLQTATFRQ True NCI_RA007_Epitope_Rep1 1307.64697832703 1307.6458899358602 76.228 2 -0.42626584970159614 0.11515658904132994 0.9438714419765777 ['ZC4H2|p.R174L|1|0.38|ENSG00000126970|chrX:64919082-64919082|C/A|missense_variant'] 100106 8258 SLLADHDQLAP True NCI_RA007_Epitope_Rep5 1178.5931518490202 1178.5920499358601 38.443 2 -0.4262745532553468 0.11515658904132994 0.9438714419765777 ['nc|ENSG00000164053|Q8WXE1-5|ATRIP', 'nc|ENSG00000164053|Q8WXE1-3|ATRIP', 'nc|ENSG00000164053|Q8WXE1-2|ATRIP', 'ENSG00000164053|ENST00000320211|ATRIP'] 82841 10827 PVTAAEDLEI True PC9_epitope_Rep5 1056.5339056374 1056.53280993586 46.634 2 -0.426371789596205 0.11521705704474398 0.9438714419765777 ['ADCK1|p.T401A|1|0.32|ENSG00000063761|chr14:77925956-77925956|A/G|missense_variant'] 2494 14651 AEQPWPPLPA True H1975_Epitope_Rep3 1104.56039516876 1104.55928993586 61.722 2 -0.42637479400392253 0.11521705704474398 0.9438714419765777 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'ENST00000466561.1_1_1:17312718-17313137:-|nuORF'] 58359 6709 LEVENRSESP True NCI_RA007_Epitope_Rep1 1158.5516809598598 1158.5505899358602 30.106 2 -0.4263759899661417 0.11521705704474398 0.9438714419765777 ['ENSG00000257315|ENST00000550078|ZBED6'] 119111 9695 VEIKDLNDNAP True NCI_RA007_Epitope_Rep1 1226.6142812164198 1226.6131899358602 41.712 2 -0.4263789373290951 0.11521705704474398 0.9438714419765777 ['PCDH19|p.P364Rfs*4|1|0.54|ENSG00000165194|chrX:100407507-100407507|G/-|frameshift_variant', 'nc|ENSG00000165194|Q8TAB3-3|PCDH19', 'nc|ENSG00000165194|Q8TAB3-2|PCDH19', 'ENSG00000165194|ENST00000373034|PCDH19'] 51937 21273 KKTRVYHRQWK True PC9_epitope_Rep6 1528.8738990004397 1528.87280993586 94.68 2 -0.42639745864606826 0.11522823561568948 0.9438714419765777 ['ENST00000586052.5_1_17:76435259-76454697:-|nuORF'] 83336 6672 QAMPPQDIP True PC9_epitope_Rep2 995.4746169394698 995.47350993586 31.07 2 -0.42640751303876145 0.11522823561568948 0.9438714419765777 ['MS4A14|p.H393Q|1|0.32|ENSG00000166928|chr11:60416147-60416147|C/A|missense_variant'] 122946 20194 VGVYALDSI True PC9_epitope_Rep5 935.4963979298699 935.49530993586 82.722 2 -0.4264398341951328 0.11522823561568948 0.9438714419765777 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 33563 18286 GLKIGDTV True PC9_epitope_Rep5 801.45961849833 801.45852993586 75.352 2 -0.42646375547135573 0.11524138166660973 0.9438714419765777 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 82539 19924 PVFRLLSVL True PC9_epitope_Rep1 1042.65390163078 1042.6528099358602 81.456 2 -0.42647970940202007 0.11524138166660973 0.9438714419765777 ['ENSG00000213901|ENST00000409878|SLC23A3', 'nc|ENSG00000213901|Q6PIS1-5|SLC23A3'] 35912 20467 GVAIPLPGV True PC9_epitope_Rep4 821.50108938749 821.5005449679301 86.872 1 -0.4265677866448906 0.11529986505645423 0.9438714419765777 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45545897-45546854:+|nuORF'] 19823 10442 ELTSHQGVL True PC9_epitope_Rep5 982.5083595959001 982.50726993586 45.152 2 -0.4265713442343138 0.11529986505645423 0.9438714419765777 ['nc|ENSG00000148655|Q9H2I8|LRMDA', 'ENST00000593699.5_1_10:77643188-78317043:+|nuORF', 'ENSG00000148655|ENST00000611255|LRMDA'] 110317 20675 TIILDKLEKP True PC9_epitope_Rep2 1168.70672504928 1168.70562993586 84.962 2 -0.4265762806775776 0.11529986505645423 0.9438714419765777 ['ENSG00000160161|ENST00000291495|CILP2'] 58199 9764 LESPNPENKDY True H1975_Epitope_Rep1 1304.5884603914 1304.5868249037899 42.487 3 -0.4266042887968266 0.11529986505645423 0.9438714419765777 ['ENSG00000071537|ENST00000336735|SEL1L', 'nc|ENSG00000071537|Q9UBV2-2|SEL1L'] 80191 17121 PLAEGSFAP True PC9_epitope_Rep1 887.4388830537499 887.43778993586 70.68 2 -0.42660440387217524 0.11529986505645423 0.9438714419765777 ['ENSG00000150594|ENST00000280155|ADRA2A'] 87158 2891 QSKMRANNQK True NCI_RA007_Epitope_Rep5 1203.61423873011 1203.61258490379 16.069 3 -0.4266546529641206 0.11531103747480613 0.9438714419765777 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 73430 7087 NESKFRREMEK True H1975_Epitope_Rep1 1452.7143466942 1452.7132499358602 32.287 2 -0.4266726161094451 0.11531103747480613 0.9438714419765777 ['UBR5|p.K2221N|1|0.5|ENSG00000104517|chr8:102275587-102275587|T/A|missense_variant'] 3960 3997 AHEEDNTVEL True PC9_epitope_Rep4 1155.5043964142699 1155.50275490379 21.608 3 -0.4266768688852194 0.11531103747480613 0.9438714419765777 ['ENSG00000185818|ENST00000423729|NAT8L'] 13447 6537 DNVGFNVK True NCI_RA007_Epitope_Rep3 891.44503106335 891.44392993586 32.757 2 -0.42675775324847864 0.11535636817025056 0.9438714419765777 ['ENSG00000156508|ENST00000309268|EEF1A1', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion'] 86776 13105 QRMNRLDQCY True H1975_Epitope_Rep2 1325.59687441381 1325.59522490379 55.535 3 -0.42677748594597537 0.11535636817025056 0.9438714419765777 ['nc|ENSG00000184613|Q99435-3|NELL2', 'ENST00000547751.5_1_12:45059243-45269664:-|nuORF', 'NELL2|p.H611Afs*6|1|0.26|ENSG00000184613|chr12:44523458-44523459|-/C|frameshift_variant', 'nc|ENSG00000184613|Q99435-4|NELL2', 'ENSG00000184613|ENST00000429094|NELL2', 'nc|ENSG00000184613|Q99435-2|NELL2'] 18414 11063 EKEQNKRLWDR True H1975_Epitope_Rep3 1500.7797238320798 1500.7786299358602 47.645 2 -0.4267823262156004 0.11535636817025056 0.9438714419765777 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158'] 91025 8626 RLKRWEEFP True NCI_RA007_Epitope_Rep4 1259.6774906096698 1259.67583490379 39.964 3 -0.4268705175869311 0.11538264478335866 0.9438714419765777 ['ENST00000395900.1_1_11:32457375-32459526:+|nuORF'] 112448 5696 TNPNHIYL True PC9_epitope_Rep3 970.4872302285 970.48612993586 26.983 2 -0.4268909733875574 0.11538264478335866 0.9438714419765777 ['ENST00000309534.10_1_3:88105110-88107183:-|nuORF'] 136788 25100 YIRVRVIE True PC9_epitope_Rep5 1046.6236641316598 1046.6225699358602 101.69 2 -0.4269467082774021 0.11538264478335866 0.9438714419765777 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 54502 6472 LAADPSHP True NCI_RA007_Epitope_Rep5 806.3922672145 806.39116993586 31.56 2 -0.4269592167528948 0.11538264478335866 0.9438714419765777 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 120032 16195 VFDYEAAG True PC9_epitope_Rep5 870.3759484440199 870.3753949679301 67.285 1 -0.4270527083600445 0.11543912976656022 0.9438714419765777 ['ENSG00000130758|ENST00000253055|MAP3K10'] 124907 16553 VLLRMACSNI True H1975_Epitope_Rep1 1118.5940208795 1118.5929299358602 69.046 2 -0.4270573615939672 0.11543912976656022 0.9438714419765777 ['ENSG00000184166|ENST00000641833|OR1D2'] 99713 18972 SLGFEQLSL True PC9_epitope_Rep2 992.51786165044 992.51676993586 78.341 2 -0.42707365712958445 0.11543912976656022 0.9438714419765777 ['ENSG00000187714|ENST00000374115|SLC18A3'] 107471 12884 SYYSQQGVP True PC9_epitope_Rep3 1027.4610750503098 1027.45996993586 54.575 2 -0.42709550907359245 0.11543912976656022 0.9438714419765777 ['ENST00000484541.5_1_10:127478031-127484749:-|nuORF', 'ENST00000465577.5_1_10:127477439-127486658:-|nuORF', 'ENSG00000188690|ENST00000368797|UROS'] 87095 7837 QSEPNVLDD True NCI_RA007_Epitope_Rep5 1015.4458189089898 1015.44527496793 36.844 1 -0.4270955759003298 0.11543912976656022 0.9438714419765777 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80'] 105032 10210 STIPGTYVGV True H1975_Epitope_Rep3 992.51786165044 992.51676993586 44.318 2 -0.4271233834031373 0.11543912976656022 0.9438714419765777 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 137519 16216 YLQESFVQAA True PC9_epitope_Rep5 1154.56078909158 1154.5596899358602 67.367 2 -0.4271638566385786 0.1154542349726776 0.9438714419765777 ['BRINP3|p.R254S|1|0.17|ENSG00000162670|chr1:190226283-190226283|G/T|missense_variant'] 119822 19341 VEVMKTALGP True PC9_epitope_Rep6 1043.5685173243098 1043.56740993586 87.043 2 -0.42718566715801387 0.11546933966291559 0.9438714419765777 ['ENSG00000232070|ENST00000556585|TMEM253'] 100836 9025 SLSAKASLGSL True NCI_RA007_Epitope_Rep4 1032.5815245361598 1032.5804299358601 41.547 2 -0.427212514970203 0.11550151975683891 0.9438714419765777 ['ENST00000515519.5_1_5:148443020-148443128:+|nuORF'] 120028 16157 VFDYEAAG True PC9_epitope_Rep3 870.3759484440199 870.3753949679301 67.293 1 -0.4272969021053546 0.1155829519841541 0.9438714419765777 ['ENSG00000130758|ENST00000253055|MAP3K10'] 70946 11711 MELRRRYQNLY True H1975_Epitope_Rep3 1540.7932657212398 1540.79216993586 50.186 2 -0.42730844858898137 0.1155829519841541 0.9438714419765777 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 27023 9516 FLLPRLDTSNE True H1975_Epitope_Rep3 1303.67721582615 1303.67610993586 41.609 2 -0.4273259922438149 0.1155980534448903 0.9438714419765777 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1', 'ENST00000527071.1_1_8:145254030-145268916:+|nuORF', 'nc|ENSG00000179832|Q8NDA8-6|MROH1', 'nc|ENSG00000179832|Q8NDA8-4|MROH1'] 52963 18338 KRLYYREKKYK True NCI_RA007_Epitope_Rep1 1573.90928144965 1573.90818993586 75.468 2 -0.4273383559816186 0.11561315438991907 0.9438714419765777 ['nc|ENSG00000135124|Q99571-2|P2RX4', 'ENST00000499638.6_1_12:121661214-121671021:+|nuORF', 'ENST00000543318.5_1_12:121659934-121671349:+|nuORF', 'nc|ENSG00000135124|Q99571-3|P2RX4', 'ENSG00000135124|ENST00000337233|P2RX4'] 81730 6173 PSALKDVL True PC9_epitope_Rep1 841.49091862661 841.48982993586 28.559 2 -0.42751787119209755 0.11576485051308757 0.9438714419765777 ['ENSG00000124120|ENST00000262605|TTPAL'] 719 15061 AAVLYEKDI True PC9_epitope_Rep2 1020.54916177872 1020.54806993586 63.189 2 -0.4275656605136668 0.1157799480945226 0.9438714419765777 ['ENSG00000166971|ENST00000394657|AKTIP', 'nc|ENSG00000166971|Q9H8T0-2|AKTIP', 'ENST00000514047.1_1_5:24171013-24171163:+|nuORF'] 127712 27216 VRHHWVHRRRL True PC9_epitope_Rep5 1550.8919491064198 1550.8903049037901 111.48 3 -0.42757465423068214 0.11579504516040909 0.9438714419765777 ['DGKI|p.Q259L|1|0.29|ENSG00000157680|chr7:137645500-137645500|T/A|missense_variant'] 2938 5427 AFGDTKFS True NCI_RA007_Epitope_Rep1 871.40758292547 871.40648993586 25.181 2 -0.4275994733131095 0.11580816444998378 0.9438714419765777 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'TRIM28|p.V808L|1|0.24|ENSG00000130726|chr19:58550467-58550467|G/T|missense_variant', 'ENST00000598355.1_1_19:59061017-59061917:+|nuORF'] 85933 11951 QNVVVTEAVKE True PC9_epitope_Rep5 1214.65066672514 1214.6495699358602 50.967 2 -0.4276356094819986 0.11580816444998378 0.9438714419765777 ['nc|ENSG00000154645|Q9H9P2-3|CHODL', 'chr21:17917400-18256509|409|12.4|0.24|5.68|+|ENST00000400131|CHODL,CHODL'] 61098 17121 LLCMEEYV True PC9_epitope_Rep2 998.44529095714 998.44418993586 71.104 2 -0.427654019779765 0.11584033326504131 0.9438714419765777 ['ENST00000471337.5_1_1:45805924-45808422:+|nuORF', 'nc|ENSG00000132773|Q96GM8-2|TOE1', 'ENSG00000132773|ENST00000372090|TOE1'] 118423 15661 VDPAPEGSPL True PC9_epitope_Rep1 980.4814761417199 980.48036993586 65.06 2 -0.4278009709220896 0.11590664640704762 0.9438714419765777 ['ENST00000498783.5_1_9:130687427-130690958:-|nuORF', 'nc|ENSG00000167103|Q5T9C9-2|PIP5KL1', 'ENST00000464759.5_1_9:130684128-130689655:-|nuORF', 'ENSG00000167103|ENST00000388747|PIP5KL1'] 101553 13362 SPASQLVAT True PC9_epitope_Rep2 872.46034677432 872.45924993586 56.672 2 -0.42784751566875323 0.1159217400211698 0.9438714419765777 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 57000 8631 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 38.151 2 -0.4279157777526359 0.1159539052496799 0.9438714419765777 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 14493 6941 DTWESLQK True NCI_RA007_Epitope_Rep1 1005.47672511445 1005.47562993586 31.003 2 -0.4279612260242131 0.11596899754165528 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 11465 15545 DFWLRHRLQWW True PC9_epitope_Rep5 1641.8316998352898 1641.8306099358601 64.805 2 -0.42798889274843305 0.11597814953909184 0.9438714419765777 ['ENSG00000256525|ENST00000539111|POLG2', 'ENST00000580893.5_1_17:62486773-62489133:-|nuORF', 'ENST00000585141.5_1_17:62481823-62493086:-|nuORF'] 99444 5284 SLEKDEEDY True H1975_Epitope_Rep3 1126.46661392322 1126.4655099358602 25.407 2 -0.4280160647078315 0.11597814953909184 0.9438714419765777 ['nc|ENSG00000148655|Q9H2I8|LRMDA', 'ENST00000593699.5_1_10:77643188-78317043:+|nuORF', 'ENSG00000148655|ENST00000611255|LRMDA'] 11372 17711 DFGLDVYLT True H1975_Epitope_Rep2 1041.5018772331298 1041.50137496793 73.446 1 -0.42801708064768057 0.11597814953909184 0.9438714419765777 ['nc|ENSG00000172940|Q9Y226-2|SLC22A13', 'ENSG00000172940|ENST00000311856|SLC22A13'] 121700 18402 VGLNLSSL True PC9_epitope_Rep1 801.4596184983301 801.4590749679301 75.573 1 -0.4280235961145404 0.11597814953909184 0.9438714419765777 ['ENSG00000213171|ENST00000368820|LINGO4'] 11464 15650 DFWLRHRLQWW True PC9_epitope_Rep1 1641.8316998352898 1641.8306099358601 65.019 2 -0.42815061025805995 0.1160273808914153 0.9438714419765777 ['ENSG00000256525|ENST00000539111|POLG2', 'ENST00000580893.5_1_17:62486773-62489133:-|nuORF', 'ENST00000585141.5_1_17:62481823-62493086:-|nuORF'] 81916 9553 PSNFPVEQP True PC9_epitope_Rep2 1013.4818104948899 1013.48070993586 42.091 2 -0.42822612319486253 0.11605954047318288 0.9438714419765777 ['ENST00000527517.1_1_11:812371-812833:+|nuORF'] 17991 6685 EIGWETPP True H1975_Epitope_Rep3 927.4337976733099 927.43270993586 30.668 2 -0.4282814694330291 0.11610678683599618 0.9438714419765777 ['nc|ENSG00000172164|Q13884-2|SNTB1', 'ENSG00000172164|ENST00000517992|SNTB1', 'ENST00000519298.1_1_8:121667161-121706140:-|nuORF', 'ENST00000519177.5_1_8:121583594-121823792:-|nuORF'] 138501 13624 YRIREFRQTFR True NCI_RA007_Epitope_Rep2 1570.84807817542 1570.84642490379 57.634 3 -0.4282827607864873 0.11610678683599618 0.9438714419765777 ['ENSG00000128271|ENST00000337539|ADORA2A'] 124797 12529 VLLFMQLVP True PC9_epitope_Rep1 1058.61982462118 1058.61872993586 53.064 2 -0.4283481239820003 0.11612110454995392 0.9438714419765777 ['ENSG00000197375|ENST00000245407|SLC22A5', 'nc|ENSG00000197375|O76082-3|SLC22A5', 'ENST00000448810.5_1_5:131726469-131729504:+|nuORF', 'nc|ENSG00000197375|O76082-2|SLC22A5', 'ENST00000475308.1_1_5:131726319-131729961:+|nuORF', 'ENST00000461013.5_1_5:131719758-131729961:+|nuORF'] 19060 17634 ELGSALAP True NCI_RA007_Epitope_Rep1 756.40176926904 756.40122496793 72.729 1 -0.4284224179378561 0.11612110454995392 0.9438714419765777 ['ENST00000490187.1_1_20:25205760-25206148:+|nuORF'] 39459 12173 HNIKLFVL True NCI_RA007_Epitope_Rep4 982.59638675466 982.59528993586 53.821 2 -0.42845588054488704 0.11612110454995392 0.9438714419765777 ['nc|ENSG00000137491|O94956-3|SLCO2B1', 'ENSG00000137491|ENST00000289575|SLCO2B1'] 65874 8502 LSLAGGSELQ True PC9_epitope_Rep6 973.5080252427299 973.50692993586 42.435 2 -0.4284647546440771 0.11612110454995392 0.9438714419765777 ['nc|ENSG00000198788|Q02817|MUC2', 'ENSG00000198788|ENST00000675028|MUC2'] 41296 18913 IAGVTGFIGL True PC9_epitope_Rep5 946.5487678559 946.54766993586 77.77 2 -0.4285106300504296 0.11612110454995392 0.9438714419765777 ['nc|ENSG00000198513|Q8WXF7-2|ATL1', 'ENSG00000198513|ENST00000358385|ATL1'] 123301 9630 VHSPAGMAL True PC9_epitope_Rep4 881.4429228883699 881.44182993586 44.665 2 -0.4285190463270404 0.11612110454995392 0.9438714419765777 ['ENSG00000136867|ENST00000259392|SLC31A2'] 37151 17189 GVTGYFTVTL True PC9_epitope_Rep4 1056.54916177872 1056.5480699358602 74.122 2 -0.4285310244211265 0.11612110454995392 0.9438714419765777 ['nc|ENSG00000170848|Q00889|PSG6', 'ENSG00000170848|ENST00000187910|PSG6', 'ENST00000402456.4_1_19:43414555-43422019:-|nuORF'] 118545 7069 VDVLYNEEKQK True NCI_RA007_Epitope_Rep2 1363.69834519355 1363.69724993586 32.121 2 -0.42854609797193066 0.11612110454995392 0.9438714419765777 ['STK11|p.P281Rfs*6|1|0.82|ENSG00000118046|chr19:1221315-1221315|C/-|frameshift_variant', 'ENST00000589152.5_1_19:1206825-1221398:+|nuORF', 'nc|ENSG00000118046|Q15831-2|STK11', 'ENSG00000118046|ENST00000326873|STK11', 'ENST00000586358.5_1_19:1207098-1220516:+|nuORF'] 111597 14608 TLNLLLYND True PC9_epitope_Rep3 1077.5706254992901 1077.5695299358601 61.321 2 -0.4285785822183148 0.11612110454995392 0.9438714419765777 ['ENSG00000170044|ENST00000466937|ZPLD1', 'nc|ENSG00000170044|Q8TCW7-2|ZPLD1', 'chr3:102457853-102462281|118|35.1|0.17|7.72|+|0|ZPLD1,ZPLD1|1', 'ZPLD1|p.S196L|1|0.22|ENSG00000170044|chr3:102462285-102462285|C/T|missense_variant'] 56526 19825 LDVARGIVI True PC9_epitope_Rep5 954.5862159937799 954.58510993586 81.303 2 -0.42858161445408427 0.11612110454995392 0.9438714419765777 ['RAB3GAP2|p.A418V|1|0.16|ENSG00000118873|chr1:220193257-220193257|G/A|missense_variant'] 16696 8585 EEVGTPHQDVP True PC9_epitope_Rep3 1206.55168095986 1206.5505899358602 37.974 2 -0.42859348602558517 0.11613420711311352 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 101262 12472 SLWPPFRCRWK True NCI_RA007_Epitope_Rep1 1474.76559442142 1474.7644899358602 52.491 2 -0.42861130032146555 0.11613420711311352 0.9438714419765777 ['ENSG00000214711|ENST00000403897|CAPN14'] 111534 6364 TLLSQISTK True NCI_RA007_Epitope_Rep4 989.57571087973 989.5746099358599 31.083 2 -0.4286343861003859 0.11614532671205993 0.9438714419765777 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 121207 14933 VGGPEIEVG True PC9_epitope_Rep1 855.4337976733099 855.43324496793 62.263 1 -0.4286613288616985 0.11614532671205993 0.9438714419765777 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 99722 9446 SLGGFEITPP True H1975_Epitope_Rep1 1016.5178616504398 1016.51676993586 41.25 2 -0.42872115875106664 0.11614532671205993 0.9438714419765777 ['nc|ENSG00000181163|P06748-2|NPM1', 'ENSG00000181163|ENST00000296930|NPM1', 'nc|ENSG00000181163|P06748-3|NPM1', 'ENST00000502784.2_1_5:93019019-93019256:-|nuORF', 'ENST00000518587.1_1_5:170814889-170819841:+|nuORF', 'ENST00000434232.1_1_7:36858782-36858980:+|nuORF', 'ENST00000423757.1_1_7:149031294-149031639:+|nuORF', 'ENST00000438918.1_1_2:204637659-204638058:-|nuORF', 'ENST00000426339.1_1_10:98320174-98320360:+|nuORF', 'ENST00000412580.1_1_2:122466160-122466664:-|nuORF'] 42113 12841 IEENLSSPNP True H1975_Epitope_Rep2 1098.51931820242 1098.51822993586 54.504 2 -0.4288704333090104 0.11616040955631399 0.9438714419765777 ['ENSG00000023287|ENST00000025008|RB1CC1', 'nc|ENSG00000023287|Q8TDY2-2|RB1CC1'] 49516 6552 KKEQEVYVK True NCI_RA007_Epitope_Rep5 1149.6393737654498 1149.63772490379 31.864 3 -0.428877301912504 0.11617549188580399 0.9438714419765777 ['ENSG00000118492|ENST00000397944|ADGB'] 15878 9817 EDPAAAFTLP True NCI_RA007_Epitope_Rep1 1030.49712620586 1030.4960299358602 42.189 2 -0.4289160743395074 0.11620763796457459 0.9438714419765777 ['XKR4|p.I597Mfs*25|1|0.35|ENSG00000206579|chr8:55524064-55524064|T/-|frameshift_variant', 'ENSG00000206579|ENST00000327381|XKR4'] 9518 15988 AWWLMVLL True PC9_epitope_Rep5 1030.5673951254998 1030.5662899358601 66.489 2 -0.4289752357667174 0.11621875266615476 0.9438714419765777 ['ENST00000252699.6_1_19:39220957-39221242:+|nuORF'] 57240 13879 LEFLASNDP True H1975_Epitope_Rep2 1004.48147614172 1004.48036993586 58.529 2 -0.42898067173036697 0.11621875266615476 0.9438714419765777 ['nc|ENSG00000266074|Q9P281|BAHCC1'] 140011 5570 YVLEQQRI True NCI_RA007_Epitope_Rep3 1047.5712942056298 1047.57018993586 28.902 2 -0.4289808174439915 0.11621875266615476 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000263956|ENST00000682118|NBPF11'] 131727 18367 VWVWVCLRRRL True NCI_RA007_Epitope_Rep4 1484.8550781321599 1484.85398993586 79.458 2 -0.42904585647589 0.11622986622986622 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 124736 5005 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 25.956 3 -0.42912218830702525 0.11622986622986622 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 39932 14756 HQNDFKIEL True PC9_epitope_Rep3 1142.57202248162 1142.57038490379 61.897 3 -0.4291430775401821 0.11622986622986622 0.9438714419765777 ['ENSG00000105877|ENST00000409508|DNAH11'] 56053 15465 LDLAQRTLYR True PC9_epitope_Rep1 1247.69861997707 1247.69698490379 64.307 3 -0.4292066954596751 0.11632628687447749 0.9438714419765777 ['ZNF544|p.L412Tfs*29|1|0.22|ENSG00000198131|chr19:58261839-58261840|-/A|frameshift_variant', 'ENSG00000198131|ENST00000687789|ZNF544', 'ENST00000595560.1_1_19:58067392-58071050:-|nuORF', 'nc|ENSG00000251369|Q7Z398-2|ZNF550', 'ENSG00000251369|ENST00000699333|ZNF550', 'ENST00000596597.5_1_19:58757693-58758161:+|nuORF'] 3402 10306 AGKAPSNTSTL True PC9_epitope_Rep5 1045.5403880001702 1045.53928993586 44.63 2 -0.4292442003344347 0.11632628687447749 0.9438714419765777 ['nc|ENSG998|Q9N2K0|HERV-H-ENH1'] 80689 12517 PLPVPPPTG True PC9_epitope_Rep2 873.49600400705 873.49490993586 53.454 2 -0.42925699947340185 0.11632628687447749 0.9438714419765777 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 326 7126 AAIKGNQESVK True NCI_RA007_Epitope_Rep3 1143.62478633047 1143.62368993586 35.152 2 -0.4293072748621284 0.11634136354330171 0.9438714419765777 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 138273 13268 YQVRNWLI True PC9_epitope_Rep5 1090.59236400338 1090.59126993586 56.046 2 -0.42940425600174986 0.11635048450934898 0.9438714419765777 ['ENST00000279488.7_1_12:89742839-89743004:-|nuORF'] 123710 17767 VIPSSVPNI True PC9_epitope_Rep4 924.52803241132 924.52692993586 76.367 2 -0.4294237595056237 0.11635048450934898 0.9438714419765777 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 77525 6241 NYQKRFQNL True PC9_epitope_Rep6 1209.6254550368096 1209.62380490379 32.492 3 -0.42943976506916415 0.11635048450934898 0.9438714419765777 ['nc|ENSG00000060491|Q9NZT2-2|OGFR', 'ENSG00000060491|ENST00000290291|OGFR'] 55439 13000 LATRETPAAP True PC9_epitope_Rep3 1025.5505587610498 1025.54946993586 55.031 2 -0.4294471567463603 0.11635048450934898 0.9438714419765777 ['ENST00000261211.7_1_12:96728621-96793984:-|nuORF'] 119905 14695 VEWEGRSLLKA True PC9_epitope_Rep1 1286.6982856239 1286.69665490379 61.345 3 -0.42947138768020054 0.11636357432870449 0.9438714419765777 ['nc|ENSG00000170291|Q8TE02-1|ELP5', 'nc|ENSG00000170291|Q8TE02-2|ELP5', 'ENSG00000170291|ENST00000396628|ELP5', 'nc|ENSG00000170291|Q8TE02-3|ELP5'] 35436 4972 GTDTTGQEVA True NCI_RA007_Epitope_Rep5 977.4301688448498 977.42906993586 25.827 2 -0.42947734823804695 0.11636357432870449 0.9438714419765777 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-2|METTL22'] 108151 17576 TDRPLLSTL True PC9_epitope_Rep5 1014.57095985246 1014.56986993586 72.615 2 -0.42953513332925597 0.11639570787628585 0.9438714419765777 ['ENSG00000198952|ENST00000361813|SMG5'] 23152 10369 EVNPQGVLL True H1975_Epitope_Rep3 967.5338460677498 967.53274993586 44.938 2 -0.42961410147990264 0.11641078130330945 0.9438714419765777 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant'] 99712 19571 SLGFEQLSL True PC9_epitope_Rep1 992.51786165044 992.51676993586 80.105 2 -0.4296326540825312 0.11642188219640755 0.9438714419765777 ['ENSG00000187714|ENST00000374115|SLC18A3'] 74888 11073 NLQTVNVDEN True PC9_epitope_Rep1 1144.53603089572 1144.53547496793 47.48 1 -0.42965040234495533 0.11642188219640755 0.9438714419765777 ['ENSG00000071082|ENST00000264258|RPL31', 'ENST00000480540.1_1_14:59261390-59261744:+|nuORF'] 131728 18441 VWVWVCLRRRL True NCI_RA007_Epitope_Rep4 1484.8550781321599 1484.85398993586 79.809 2 -0.42970132281485773 0.11642188219640755 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 126465 19571 VPLSVLIRP True PC9_epitope_Rep1 992.63825156664 992.63714993586 80.105 2 -0.42975009034860084 0.11643695414847162 0.9438714419765777 ['ENSG00000271303|ENST00000381962|SRXN1'] 44533 10573 IPALICLHPLF True H1975_Epitope_Rep3 1235.71003660791 1235.7089299358602 45.738 2 -0.4297806317845157 0.11644805294488887 0.9438714419765777 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 67015 10385 LTALTEKSKL True H1975_Epitope_Rep1 1102.65977485686 1102.6586699358602 44.895 2 -0.42979646534127697 0.11644805294488887 0.9438714419765777 ['RYR1|p.R3707L|1|0.4|ENSG00000196218|chr19:38529036-38529036|G/T|missense_variant'] 97398 6516 SGEIKKKY True H1975_Epitope_Rep3 951.5389314481899 951.53782993586 30.033 2 -0.4298176046115827 0.11644805294488887 0.9438714419765777 ['nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5'] 67877 11591 LTKKMLYDME True PC9_epitope_Rep5 1270.6301316047 1270.6290299358602 49.581 2 -0.4299166532731765 0.11645517805976259 0.9438714419765777 ['ENSG00000145012|ENST00000617246|LPP'] 74456 12507 NKDPILHVL True PC9_epitope_Rep4 1047.60767971435 1047.60658993586 55.925 2 -0.42994934582876776 0.11645517805976259 0.9438714419765777 ['nc|ENSG00000130731|Q96S19-6|METTL26', 'ENSG00000130731|ENST00000301686|METTL26', 'nc|ENSG00000130731|Q96S19-4|METTL26', 'nc|ENSG00000130731|Q96S19-3|METTL26', 'nc|ENSG00000130731|Q96S19-5|METTL26', 'nc|ENSG00000130731|Q96S19-2|METTL26', 'ENST00000448973.6_1_16:685849-686290:-|nuORF'] 61774 7112 LLKHWEFDAP True NCI_RA007_Epitope_Rep1 1254.6397081186199 1254.63805490379 31.655 3 -0.4299806452898413 0.11645517805976259 0.9438714419765777 ['ENSG00000204287|ENST00000395388|HLA-DRA'] 35279 19389 GSPCWGLL True PC9_epitope_Rep5 831.3949100667899 831.39380993586 79.625 2 -0.4299886969852976 0.11645517805976259 0.9438714419765777 ['ENST00000483944.5_1_3:124810369-124811009:-|nuORF'] 22927 6610 EVGPGEVNP True H1975_Epitope_Rep3 896.4239612655999 896.42286993586 30.377 2 -0.43001326248919813 0.11645517805976259 0.9438714419765777 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2', 'nc|ENSG00000137501|Q9HCH5-12|SYTL2'] 57891 7754 LEQHKGFMMEP True H1975_Epitope_Rep1 1345.61587852289 1345.61422490379 34.785 3 -0.4300427296516327 0.11647024713045555 0.9438714419765777 ['ENSG00000105696|ENST00000262817|TMEM59L', 'ENST00000598660.1_1_19:18729161-18731343:+|nuORF'] 126272 11352 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48561496793 48.669 1 -0.43010581743483073 0.11648134251995361 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 129102 6756 VTAVSLPR True NCI_RA007_Epitope_Rep5 841.5021520166499 841.50104993586 32.663 2 -0.43010696630057454 0.11648134251995361 0.9438714419765777 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 108069 7353 TDKVDNNTL True PC9_epitope_Rep6 1018.49310345458 1018.49200993586 37.46 2 -0.4301485465429855 0.11648134251995361 0.9438714419765777 ['nc|ENSG00000198788|Q02817|MUC2'] 59037 8134 LGATGGDVVSA True PC9_epitope_Rep4 945.4767251144499 945.47562993586 38.741 2 -0.4302278343120718 0.11650949027098007 0.9438714419765777 ['ENSG00000174292|ENST00000688331|TNK1', 'nc|ENSG00000174292|Q13470|TNK1'] 22617 9886 ETQELKWQKET True NCI_RA007_Epitope_Rep1 1418.7041588499796 1418.7030699358602 42.457 2 -0.43029457561118756 0.11650949027098007 0.9438714419765777 ['nc|ENSG00000186714|Q6ZRK6-2|CCDC73', 'ENSG00000186714|ENST00000335185|CCDC73'] 23215 11339 EVQKTEESKVP True NCI_RA007_Epitope_Rep1 1272.6561460284 1272.65504993586 48.078 2 -0.4303136083048492 0.11650949027098007 0.9438714419765777 ['ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 17024 18983 EGLRVLTQL True PC9_epitope_Rep4 1027.60259433391 1027.6014899358602 81.11 2 -0.4304049070059491 0.11652455661664393 0.9438714419765777 ['ENSG00000186526|ENST00000612078|CYP4F8'] 125395 7618 VLTDIVAK True H1975_Epitope_Rep3 857.52221875489 857.52112993586 34.283 2 -0.4304391808277134 0.11653564790341558 0.9438714419765777 ['ENSG00000135905|ENST00000258390|DOCK10', 'nc|ENSG00000135905|Q96BY6-3|DOCK10', 'ENST00000472652.1_1_2:225702475-225704822:-|nuORF'] 70705 12958 MDPFNHRIF True PC9_epitope_Rep4 1175.5545985956699 1175.5535099358601 57.734 2 -0.43043927264141807 0.11653564790341558 0.9438714419765777 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 115312 8257 TVDQAVETY True H1975_Epitope_Rep3 1024.47130538084 1024.47020993586 36.746 2 -0.43043984147881686 0.11653564790341558 0.9438714419765777 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000574210.5_1_17:2597327-2598221:-|nuORF'] 78641 5119 PDWKKRWLYWK True NCI_RA007_Epitope_Rep2 1604.86160298124 1604.85941987172 24.536 4 -0.4305391596997233 0.116582828885668 0.9438714419765777 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1'] 28709 19105 FSVDDVQTV True PC9_epitope_Rep5 1008.4763907612801 1008.47587496793 78.518 1 -0.4305407023661327 0.116582828885668 0.9438714419765777 ['ENSG00000070476|ENST00000389709|ZXDC', 'nc|ENSG00000070476|Q2QGD7-3|ZXDC', 'nc|ENSG00000070476|Q2QGD7-2|ZXDC'] 29899 7241 FWDKLIFAK True NCI_RA007_Epitope_Rep2 1166.64881625034 1166.64718490379 32.785 3 -0.43064233221307396 0.1166280180057291 0.9438714419765777 ['nc|ENSG00000197142|Q9ULC5-4|ACSL5', 'ENSG00000197142|ENST00000354655|ACSL5', 'nc|ENSG00000197142|Q9ULC5-3|ACSL5'] 128931 16728 VSTTPLLANSL True PC9_epitope_Rep2 1114.62338934814 1114.6222899358602 69.592 2 -0.4306632786556102 0.1166280180057291 0.9438714419765777 ['ENST00000506130.5_1_5:72853376-72858450:-|nuORF', 'ENST00000515804.1_1_5:72853376-72858706:-|nuORF', 'ENSG00000164331|ENST00000296785|ANKRA2'] 131908 22442 VYELHVWLL True PC9_epitope_Rep1 1170.6437308698999 1170.6426299358602 91.145 2 -0.43066627926982465 0.1166280180057291 0.9438714419765777 ['ENSG00000188505|ENST00000339852|NCCRP1'] 68580 7552 LTYFQQQQRR True NCI_RA007_Epitope_Rep5 1366.7105816430999 1366.7089349037901 35.735 3 -0.4306949919900646 0.11663711382391052 0.9438714419765777 ['nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 44904 7095 IQDNHDGTYTV True PC9_epitope_Rep4 1261.55749461629 1261.5563899358601 34.558 2 -0.43070789272935195 0.11663711382391052 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 125361 13983 VLSQQAYVLF True NCI_RA007_Epitope_Rep5 1166.6335601090198 1166.6324699358602 60.471 2 -0.4307619253082597 0.11663711382391052 0.9438714419765777 ['ENSG00000223569|ENST00000456464|USP17L15', 'ENSG00000232399|ENST00000429667|USP17L13', 'ENSG00000250844|ENST00000504209|USP17L18', 'ENSG00000250745|ENST00000506151|USP17L20', 'ENSG00000249811|ENST00000506414|USP17L21', 'ENSG00000249104|ENST00000511568|USP17L17', 'ENSG00000248933|ENST00000511280|USP17L22', 'ENSG00000235780|ENST00000515574|USP17L27', 'ENSG00000233136|ENST00000457736|USP17L11', 'ENSG00000248920|ENST00000515566|USP17L19', 'ENSG00000232264|ENST00000504481|USP17L24', 'ENSG00000231637|ENST00000511681|USP17L29', 'ENSG00000231051|ENST00000504543|USP17L28', 'ENSG00000230430|ENST00000509271|USP17L25', 'ENSG00000229579|ENST00000509660|USP17L26', 'ENSG00000228856|ENST00000504104|USP17L30', 'ENSG00000227551|ENST00000415041|USP17L12', 'ENSG00000227140|ENST00000507227|USP17L5', 'ENSG00000223443|ENST00000333796|USP17L2', 'ENSG00000225327|ENST00000530484|USP17L3', 'ENSG00000226430|ENST00000530447|USP17L7', 'ENSG00000230549|ENST00000529559|USP17L1', 'ENSG00000236125|ENST00000526929|USP17L4', 'ENSG00000237038|ENST00000527080|USP17L8', 'nc|ENSG00000205946|Q6QN14|USP17L6P', 'ENSG00000231396|ENST00000417945|USP17L10', 'ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF', 'ENST00000521713.1_1_7:6179681-6199085:+|nuORF'] 139462 15196 YTFMITQSSL True PC9_epitope_Rep3 1189.56891124713 1189.5678099358602 63.597 2 -0.4307806458140609 0.11663711382391052 0.9438714419765777 ['ENST00000308543.3_1_1:202245458-202272411:+|nuORF'] 56783 12441 LEATGLALS True H1975_Epitope_Rep2 873.48074786573 873.4801949679301 52.942 1 -0.4308006313959683 0.11666325695581015 0.9438714419765777 ['ENSG00000170458|ENST00000302014|CD14'] 3185 11372 AGELGQTPQV True PC9_epitope_Rep5 998.5032742154598 998.50216993586 48.738 2 -0.4308167207484821 0.11666325695581015 0.9438714419765777 ['nc|ENSG00000135052|Q8NBJ4-2|GOLM1', 'ENSG00000135052|ENST00000388712|GOLM1'] 46549 8966 ITQVKSKHLKD True H1975_Epitope_Rep3 1295.7561348531897 1295.7550299358602 39.484 2 -0.4308250930928884 0.11666325695581015 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 65621 20769 LSGLTRARVEV True PC9_epitope_Rep5 1199.69861997707 1199.69752993586 84.939 2 -0.43084747882272484 0.11666325695581015 0.9438714419765777 ['ENST00000490967.5_1_22:31503065-31503518:-|nuORF'] 25240 10667 FEDDLRRDL True PC9_epitope_Rep1 1177.57275075761 1177.57111490379 45.921 3 -0.43090561117617104 0.11667831631348347 0.9438714419765777 ['ENSG00000171773|ENST00000301944|NXNL1'] 25956 13849 FGSRTVFN True PC9_epitope_Rep5 926.46101548066 926.45990993586 58.29 2 -0.4310840620938476 0.11672349130583021 0.9438714419765777 ['ENST00000437198.6_1_16:14530386-14530566:-|nuORF'] 135963 4244 YFCRYCAWRVF True NCI_RA007_Epitope_Rep1 1512.67948183896 1512.6783899358602 20.62 2 -0.4310906957979996 0.11672349130583021 0.9438714419765777 ['ENSG00000163121|ENST00000451794|NEURL3'] 68331 8037 LTSALWINAAA True H1975_Epitope_Rep1 1129.61315901761 1129.61206993586 35.858 2 -0.43109640825819595 0.11672349130583021 0.9438714419765777 ['ENSG00000089060|ENST00000680972|SLC8B1', 'nc|ENSG00000089060|Q6J4K2-2|SLC8B1'] 30038 5417 FYIRCVCYKCR True NCI_RA007_Epitope_Rep2 1452.6828529672398 1452.6811949037901 25.69 3 -0.4310986720611069 0.1167385486098089 0.9438714419765777 ['ENST00000360150.8_1_12:29493870-29493933:-|nuORF'] 31403 7222 GEDDGSTLP True H1975_Epitope_Rep2 889.36650595913 889.3659549679301 32.713 1 -0.4311036082227054 0.1167476348759908 0.9438714419765777 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B'] 59750 23162 LGVVEEQII True PC9_epitope_Rep5 998.5648118428599 998.56370993586 94.081 2 -0.43110494840659047 0.1167476348759908 0.9438714419765777 ['ENST00000409025.5_1_2:85875970-85876307:+|nuORF'] 32392 7864 GGGFADPRDAG True H1975_Epitope_Rep1 1018.4468219684999 1018.44572993586 35.202 2 -0.4311143912572181 0.1167476348759908 0.9438714419765777 ['ENST00000556029.5_2_12:98909542-98909698:+|nuORF'] 27037 20884 FLMDHVFIQ True PC9_epitope_Rep4 1148.5688516774799 1148.56774993586 88.488 2 -0.4311325863792423 0.1167476348759908 0.9438714419765777 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3'] 8477 6384 ATTQANGGWP True PC9_epitope_Rep2 1001.4566583762098 1001.45556993586 29.961 2 -0.43115793573227124 0.11676269048511916 0.9438714419765777 ['ENSG00000091664|ENST00000263160|SLC17A6'] 93060 20041 RRRKKRRREEE True NCI_RA007_Epitope_Rep3 1597.93493611721 1597.93382993586 87.332 2 -0.4311940527694695 0.11681183629638468 0.9438714419765777 ['ENST00000235307.6_1_1:184356289-184446531:+|nuORF'] 67909 12903 LTLDDDLDTV True PC9_epitope_Rep3 1118.53429956022 1118.5332099358602 54.651 2 -0.4312042413220409 0.11682689029794778 0.9438714419765777 ['ENSG00000149577|ENST00000324225|SIDT2'] 41813 14475 IDSEPECP True PC9_epitope_Rep3 888.3534987472799 888.35240993586 60.787 2 -0.4312573814478308 0.11684194378632667 0.9438714419765777 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000472593.1_1_3:183521690-183528368:+|nuORF'] 19713 7283 ELSKEECCSTG True H1975_Epitope_Rep3 1184.4689395056798 1184.4678499358602 32.988 2 -0.4312820699343993 0.1168550050280377 0.9438714419765777 ['nc|ENSG00000134363|P19883-2|FST', 'ENSG00000134363|ENST00000256759|FST'] 78811 7231 PEPALESVP True H1975_Epitope_Rep3 937.47566248529 937.47456993586 32.786 2 -0.4313367005798715 0.1168550050280377 0.9438714419765777 ['ENSG00000274588|ENST00000611977|DGKK'] 13635 16190 DPVDKIVL True PC9_epitope_Rep1 897.5171333744499 897.51602993586 67.091 2 -0.4313829377477798 0.11686806537930565 0.9438714419765777 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 79249 11462 PGGLFGTSS True PC9_epitope_Rep4 821.39193286133 821.3913849679301 51.852 1 -0.4313967096193858 0.11686806537930565 0.9438714419765777 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 129041 10892 VTAGVKLI True PC9_epitope_Rep1 799.51673945163 799.51564993586 46.781 2 -0.431445101268287 0.1168771409581267 0.9438714419765777 ['ENST00000287218.8_1_6:38120424-38120514:+|nuORF'] 13250 8654 DLVIGFNSGF True H1975_Epitope_Rep1 1067.52876068731 1067.52766993586 38.217 2 -0.43146371133800365 0.1168771409581267 0.9438714419765777 ['nc|ENSG00000141497|Q9H091-2|ZMYND15', 'ENSG00000141497|ENST00000433935|ZMYND15'] 79588 6993 PGVDSVPLQHT True NCI_RA007_Epitope_Rep3 1148.5825871653199 1148.5814899358602 34.615 2 -0.43150201662214355 0.1168771409581267 0.9438714419765777 ['CTNND2|p.R471H|2|0.54|ENSG00000169862|chr5:11346588-11346588|C/T|missense_variant'] 107893 5190 TATTNISVVP True NCI_RA007_Epitope_Rep3 1001.5393253710099 1001.53822993586 27.412 2 -0.4315353214538504 0.1168771409581267 0.9438714419765777 ['ENST00000517764.1_1_8:94934348-94934420:+|nuORF'] 41322 10819 IAKGNNVL True PC9_epitope_Rep2 827.4865019525099 827.48540993586 46.934 2 -0.4315889450077011 0.11689019921948227 0.9438714419765777 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant', 'NEB|p.L1303F|1|0.27|ENSG00000183091|chr2:151674555-151674555|T/A|missense_variant'] 85931 12058 QNVVVTEAVKE True PC9_epitope_Rep3 1214.65066672514 1214.6495699358602 51.422 2 -0.4315912235151565 0.11689019921948227 0.9438714419765777 ['nc|ENSG00000154645|Q9H9P2-3|CHODL', 'chr21:17917400-18256509|409|12.4|0.24|5.68|+|ENST00000400131|CHODL,CHODL'] 59994 17337 LHQEVSVLV True PC9_epitope_Rep1 1022.5760452328999 1022.57494993586 71.5 2 -0.43165841739977123 0.11691830544289561 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 22571 6760 ETMTKTEEV True PC9_epitope_Rep2 1066.48524119282 1066.4841499358602 31.409 2 -0.4316832195355067 0.11691830544289561 0.9438714419765777 ['ENST00000570209.1_1_15:31108772-31126588:+|nuORF'] 110344 20618 TIKSHALLL True PC9_epitope_Rep2 994.6175161220599 994.61640993586 84.741 2 -0.43169341206902007 0.11691830544289561 0.9438714419765777 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 100245 5837 SLLQACSHDP True NCI_RA007_Epitope_Rep1 1069.48624425233 1069.4851499358601 26.759 2 -0.43172896167872477 0.11692936866320185 0.9438714419765777 ['nc|ENSG00000214575|Q9BZB8-4|CPEB1', 'nc|ENSG00000214575|Q9BZB8-2|CPEB1', 'nc|ENSG00000214575|Q9BZB8-3|CPEB1', 'nc|ENSG00000214575|Q9BZB8|CPEB1', 'ENSG00000214575|ENST00000684509|CPEB1'] 8360 7574 ATLWLREHNR True NCI_RA007_Epitope_Rep1 1294.6894522756998 1294.68834993586 33.455 2 -0.43173741782745545 0.11692936866320185 0.9438714419765777 ['nc|ENSG00000095303|P23219-4|PTGS1', 'nc|ENSG00000095303|P23219-3|PTGS1', 'nc|ENSG00000095303|P23219-2|PTGS1', 'ENSG00000095303|ENST00000362012|PTGS1', 'nc|ENSG00000095303|P23219-6|PTGS1', 'nc|ENSG00000095303|P23219-5|PTGS1'] 61801 8366 LLKNQPCYR True H1975_Epitope_Rep3 1133.60154878809 1133.60044993586 37.163 2 -0.4317508013368139 0.11692936866320185 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 117996 16752 VASGTVVGV True PC9_epitope_Rep1 787.4439684341899 787.44341496793 69.264 1 -0.4317951976066166 0.11694441604471253 0.9438714419765777 ['ENSG00000054793|ENST00000338821|ATP9A'] 133390 9537 WFREFWEQRFR True H1975_Epitope_Rep1 1685.82152907441 1685.8204299358601 41.607 2 -0.4318078915574329 0.11695946291342205 0.9438714419765777 ['ENSG00000164082|ENST00000395052|GRM2'] 5242 16884 ALQHRPRLPR True PC9_epitope_Rep6 1242.7421565548998 1242.74050490379 77.461 3 -0.4318330421553567 0.11696653717712806 0.9438714419765777 ['ENST00000323927.2_1_9:140077681-140079444:-|nuORF'] 41532 15797 IDCFRRVP True PC9_epitope_Rep3 1004.5225701914 1004.52146993586 65.918 2 -0.43183762079155014 0.11696653717712806 0.9438714419765777 ['nc|ENSG00000167984|Q7RTR2-3|NLRC3'] 22889 11098 EVEWAQSVAVP True H1975_Epitope_Rep1 1213.59790287629 1213.5968099358602 47.653 2 -0.4318664530664096 0.11696653717712806 0.9438714419765777 ['ENST00000473624.1_1_22:46758892-46759096:-|nuORF'] 131730 18717 VWVWVCLRRRL True NCI_RA007_Epitope_Rep4 1484.8550781321599 1484.85398993586 80.977 2 -0.43188247576048244 0.11696653717712806 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 25860 10274 FGGLGGGSV True NCI_RA007_Epitope_Rep5 749.37080349393 749.37025496793 46.149 1 -0.43193319844464295 0.11696653717712806 0.9438714419765777 ['ENSG00000171345|ENST00000361566|KRT19', 'CON__P08727'] 80567 15636 PLNFSANFLP True H1975_Epitope_Rep1 1118.5760452329 1118.57494993586 65.43 2 -0.43198095053020036 0.11699662657171091 0.9438714419765777 ['ENST00000532986.1_1_11:62339151-62341470:-|nuORF'] 117734 13121 VALFNFSF True NCI_RA007_Epitope_Rep5 943.4803539429099 943.47924993586 57.147 2 -0.43209149851351686 0.11699662657171091 0.9438714419765777 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|145|2|anti-sense'] 97312 8825 SFSQSRYSV True PC9_epitope_Rep3 1059.4985231881901 1059.49742993586 38.896 2 -0.4323387110587912 0.11711389385807991 0.9438714419765777 ['ENSG00000166016|ENST00000435224|ABTB2', 'nc|ENSG00000166016|Q8N961-2|ABTB2'] 102463 10610 SPYHYRLDW True H1975_Epitope_Rep3 1235.5723568347898 1235.5712499358601 45.88 2 -0.43249349007926335 0.11721212327716919 0.9438714419765777 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 131731 18797 VWVWVCLRRRL True NCI_RA007_Epitope_Rep4 1484.8550781321599 1484.85398993586 81.319 2 -0.4325211352702459 0.11721212327716919 0.9438714419765777 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 115450 8842 TVFPETVP True H1975_Epitope_Rep2 888.4592841451599 888.45818993586 38.977 2 -0.4325330464886618 0.11722516567573553 0.9438714419765777 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion'] 113529 15228 TQTKDWFAL True PC9_epitope_Rep4 1108.5553097883198 1108.5542099358602 66.504 2 -0.43255336926844384 0.11722516567573553 0.9438714419765777 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'RGS22|p.K902Nfs*4|1|0.26|ENSG00000132554|chr8:100002282-100002286|TAGAT/-|frameshift_variant', 'RGS22|p.P235Qfs*30|1|0.33|ENSG00000132554|chr8:100066187-100066187|G/-|frameshift_variant', 'nc|ENSG00000132554|Q8NE09-2|RGS22', 'ENST00000520923.5_1_8:101051146-101092499:-|nuORF'] 58076 10026 LERQRQLEWER True NCI_RA007_Epitope_Rep1 1541.8062729330898 1541.8046249037898 43.006 3 -0.43257890101055996 0.1172572402044293 0.9438714419765777 ['nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528'] 66613 5943 LSSPLYLSAP True NCI_RA007_Epitope_Rep1 1046.56481184286 1046.56370993586 27.163 2 -0.4327949548267307 0.11733442354865085 0.9438714419765777 ['ENST00000361577.7_2_14:45431416-45431725:+|nuORF'] 29095 15367 FTQNSQLTL True PC9_epitope_Rep5 1050.5345743437401 1050.53346993586 64.119 2 -0.43279899769748764 0.11733442354865085 0.9438714419765777 ['nc|ENSG00000197050|Q8TAQ5-2|ZNF420', 'ENSG00000197050|ENST00000337995|ZNF420'] 78697 19553 PEEFVKFQF True PC9_epitope_Rep4 1169.57571087973 1169.57460993586 83.332 2 -0.4328132329888902 0.11733442354865085 0.9438714419765777 ['ENSG00000149403|ENST00000527524|GRIK4', 'ENST00000533291.5_1_11:120531027-120833419:+|nuORF'] 63003 7961 LNFNRQQP True PC9_epitope_Rep2 1015.5199273391099 1015.51882993586 35.985 2 -0.43287314545988603 0.11733442354865085 0.9438714419765777 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 139889 19871 YVEAEIHVP True PC9_epitope_Rep3 1055.52876068731 1055.52766993586 81.67 2 -0.43293578898596063 0.11734746022553061 0.9438714419765777 ['nc|ENSG00000133121|Q9Y3M8-3|STARD13', 'nc|ENSG00000133121|Q9Y3M8-4|STARD13', 'nc|ENSG00000133121|Q9Y3M8-2|STARD13', 'ENSG00000133121|ENST00000336934|STARD13'] 20120 9842 ENLAGVRTN True NCI_RA007_Epitope_Rep2 972.49885754136 972.49776993586 42.908 2 -0.4329381777230395 0.11734746022553061 0.9438714419765777 ['nc|ENSG00000140859|Q9BVG8-4|KIFC3', 'nc|ENSG00000140859|Q9BVG8-5|KIFC3', 'ENSG00000140859|ENST00000445690|KIFC3', 'nc|ENSG00000140859|Q9BVG8|KIFC3', 'nc|ENSG00000140859|Q9BVG8-6|KIFC3'] 4824 18354 ALEQRFNRERP True PC9_epitope_Rep1 1414.7429444005397 1414.74184993586 75.387 2 -0.43297132418585366 0.11736249510279864 0.9438714419765777 ['ENSG00000136002|ENST00000409359|ARHGEF4', 'nc|ENSG00000136002|Q9NR80-3|ARHGEF4', 'nc|ENSG00000136002|Q9NR80|ARHGEF4', 'ENST00000490728.5_1_2:131797582-131799036:+|nuORF', 'nc|ENSG00000136002|Q9NR80-4|ARHGEF4'] 23602 7713 EYEEHKQSYWR True H1975_Epitope_Rep1 1553.6899057681699 1553.68825490379 34.63 3 -0.4330213939691221 0.1173755301572161 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 23694 7742 EYHKWRIYYKK True H1975_Epitope_Rep1 1612.8514322203598 1612.84978490379 34.739 3 -0.4330307638076081 0.1173755301572161 0.9438714419765777 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'MLXIPL|p.A789Qfs*28|1|0.14|ENSG00000009950|chr7:73594349-73594349|C/-|frameshift_variant', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL'] 100052 5101 SLKMYGMGPCL True NCI_RA007_Epitope_Rep3 1198.5548584894598 1198.55320490379 27.058 3 -0.433100189619165 0.11740559690688286 0.9438714419765777 ['CACNA1E|p.R533C|1|0.48|ENSG00000198216|chr1:181718126-181718126|C/T|missense_variant'] 55000 9906 LAKAINQIAA True PC9_epitope_Rep6 1011.6076797143498 1011.60658993586 48.613 2 -0.4331054133021874 0.11740559690688286 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 135168 6670 YASPHSTAP True PC9_epitope_Rep1 929.42429561877 929.42318993586 30.46 2 -0.4331362478883653 0.11742062951355771 0.9438714419765777 ['ZNF467|p.S335Y|1|0.35|ENSG00000181444|chr7:149765498-149765498|G/T|missense_variant'] 119882 13467 VEVTHNFQV True PC9_epitope_Rep4 1071.5349086969102 1071.53380993586 59.697 2 -0.433161211695477 0.1174446923378238 0.9438714419765777 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 124306 14123 VLDLIFYQRMK True NCI_RA007_Epitope_Rep1 1424.78499245332 1424.78388993586 58.967 2 -0.43318064988920874 0.1174446923378238 0.9438714419765777 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 6436 6980 APSLEQRK True PC9_epitope_Rep4 927.5137793295099 927.51268993586 34.092 2 -0.43319715411469645 0.1174446923378238 0.9438714419765777 ['ENST00000325748.8_1_2:179315776-179315911:-|nuORF'] 100980 4966 SLSTSKSPP True H1975_Epitope_Rep2 902.4709114580199 902.46980993586 24.185 2 -0.4332253596535816 0.1174446923378238 0.9438714419765777 ['ENSG00000275023|ENST00000621332|MLLT6'] 30634 17831 GALDTNQVLL True PC9_epitope_Rep4 1042.5658744720201 1042.56476993586 76.621 2 -0.43326639513239834 0.1174446923378238 0.9438714419765777 ['nc|ENSG00000171606|Q96GC6-4|ZNF274', 'ENST00000595146.1_1_19:58722883-58724506:+|nuORF', 'nc|ENSG00000171606|Q96GC6-3|ZNF274', 'nc|ENSG00000171606|Q96GC6-2|ZNF274', 'ENSG00000171606|ENST00000617501|ZNF274'] 116005 16675 TVQTWMRRHRL True PC9_epitope_Rep5 1482.79901980802 1482.79738490379 69.144 3 -0.4333266508369121 0.11747675329541198 0.9438714419765777 ['nc|ENSG00000197275|Q9Y620-2|RAD54B'] 80812 12562 PLTGRRWKI True PC9_epitope_Rep4 1125.67709668685 1125.67546490379 56.145 3 -0.4334236435713512 0.11750681198910082 0.9438714419765777 ['ENSG00000171495|ENST00000399564|MROH2B', 'nc|ENSG00000171495|Q7Z745-2|MROH2B', 'MROH2B|p.N1445Tfs*12|1|0.3|ENSG00000171495|chr5:41000696-41000696|G/-|frameshift_variant'] 83981 8458 QELRDPTVP True H1975_Epitope_Rep2 1053.5454733806098 1053.54436993586 37.486 2 -0.43343257019344206 0.11750681198910082 0.9438714419765777 ['nc|ENSG00000142794|Q9H094-3|NBPF3', 'ENSG00000142794|ENST00000318249|NBPF3'] 115991 6743 TVQRIAAELK True PC9_epitope_Rep5 1127.6662572196299 1127.6646149037902 30.907 3 -0.4334921719809169 0.11752886285461295 0.9438714419765777 ['ENSG00000115919|ENST00000264170|KYNU', 'nc|ENSG00000115919|Q16719-2|KYNU', 'KYNU|p.F306Lfs*17|1|0.1|ENSG00000115919|chr2:143029640-143029640|T/-|frameshift_variant', 'KYNU-ARHGAP15|1|fusion'] 41812 18018 IDSEFQAYV True PC9_epitope_Rep6 1070.49204082542 1070.49094993586 81.934 2 -0.43349673837545016 0.11752886285461295 0.9438714419765777 ['ENST00000567859.5_1_16:20812516-20814833:-|nuORF', 'nc|ENSG00000196678|A8K979-3|ERI2', 'nc|ENSG00000196678|A8K979-4|ERI2', 'ENSG00000196678|ENST00000357967|ERI2'] 43588 20319 IIGDVDIAGL True PC9_epitope_Rep2 984.5491617787198 984.54806993586 83.582 2 -0.4334985268023994 0.11752886285461295 0.9438714419765777 ['ENSG00000131910|ENST00000254227|NR0B2'] 37094 19267 GVSLPRRAPF True PC9_epitope_Rep5 1098.62981214126 1098.6287099358601 79.154 2 -0.4335052074914575 0.11752886285461295 0.9438714419765777 ['nc|ENSG00000236939|P0C853|BAALC-AS2', 'ENST00000436771.1_1_8:104145257-104153519:-|nuORF'] 61451 14773 LLFALSLLK True NCI_RA007_Epitope_Rep4 1016.66340368532 1016.66230993586 64.285 2 -0.43351140899206664 0.11752886285461295 0.9438714419765777 ['ENST00000490035.6_1_3:116164040-116164325:-|nuORF'] 73490 8964 NEYILSLIEE True H1975_Epitope_Rep1 1221.6128842340897 1221.61178993586 39.384 2 -0.4335951698565776 0.11752886285461295 0.9438714419765777 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A'] 63187 20317 LNVAQLLL True PC9_epitope_Rep6 882.5538532363399 882.55274993586 90.855 2 -0.43361909482346983 0.11754388952270677 0.9438714419765777 ['nc|ENSG00000029534|P16157-14|ANK1', 'nc|ENSG00000029534|P16157-10|ANK1', 'nc|ENSG00000029534|P16157-8|ANK1', 'IKBKB-ANK1|13|fusion', 'IKBKB-ANK1|12|fusion', 'nc|ENSG00000029534|P16157-5|ANK1', 'nc|ENSG00000029534|P16157-16|ANK1', 'IKBKB-ANK1|11|fusion', 'IKBKB-ANK1|14|fusion', 'ENSG00000029534|ENST00000289734|ANK1', 'nc|ENSG00000029534|P16157|ANK1', 'IKBKB-ANK1|3|fusion', 'IKBKB-ANK1|2|fusion', 'nc|ENSG00000029534|P16157-21|ANK1', 'nc|ENSG00000029534|P16157-12|ANK1', 'IKBKB-ANK1|1|fusion', 'IKBKB-ANK1|4|fusion', 'nc|ENSG00000029534|P16157-15|ANK1', 'IKBKB-ANK1|5|fusion', 'nc|ENSG00000029534|P16157-2|ANK1', 'nc|ENSG00000029534|P16157-4|ANK1', 'nc|ENSG00000029534|P16157-7|ANK1', 'IKBKB-ANK1|15|fusion', 'nc|ENSG00000029534|P16157-6|ANK1', 'nc|ENSG00000029534|P16157-9|ANK1', 'nc|ENSG00000029534|P16157-11|ANK1', 'ANK1|p.G1477Wfs*67|1|0.37|ENSG00000029534|chr8:41684652-41684653|-/A|frameshift_variant', 'nc|ENSG00000029534|P16157-13|ANK1', 'ANK1|p.N1300Tfs*5|1|0.26|ENSG00000029534|chr8:41690561-41690561|C/-|frameshift_variant', 'ANK1|p.F806Pfs*2|1|0.12|ENSG00000029534|chr8:41701594-41701595|AA/-|frameshift_variant', 'ANK1|p.I480Mfs*7|1|0.31|ENSG00000029534|chr8:41715814-41715814|G/-|frameshift_variant'] 123990 24049 VKKQMSEKLNE True NCI_RA007_Epitope_Rep2 1332.7071360554398 1332.7054949037902 101.01 3 -0.43368765236549456 0.11760999863778776 0.9438714419765777 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 102294 9020 SPVDYGTSA True PC9_epitope_Rep5 895.39232678415 895.39177496793 39.642 1 -0.4337782295987187 0.11761901518763196 0.9438714419765777 ['ENSG00000149658|ENST00000370339|YTHDF1'] 117465 16274 VADVLGTAL True PC9_epitope_Rep3 857.48583324617 857.48528496793 67.736 1 -0.43378986444406553 0.11761901518763196 0.9438714419765777 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 111972 16697 TLSGVGTLLSL True PC9_epitope_Rep1 1059.61757569171 1059.61646993586 69.053 2 -0.433802919806777 0.11761901518763196 0.9438714419765777 ['ENST00000240922.7_1_3:113440072-113440111:-|nuORF'] 74635 7166 NLEKTNLGDRR True H1975_Epitope_Rep3 1314.70041088222 1314.6993099358601 32.538 2 -0.43381292569870045 0.11761901518763196 0.9438714419765777 ['ENST00000356721.3_1_16:48399534-48399783:-|nuORF'] 57555 6828 LELCFIFKEER True NCI_RA007_Epitope_Rep1 1425.7326225272898 1425.7309649037902 30.566 3 -0.4339006399825515 0.11766809119234502 0.9438714419765777 ['ENST00000433510.2_1_17:46713503-46713704:-|nuORF'] 85930 7913 QNVVVTEAVKE True NCI_RA007_Epitope_Rep3 1214.65066672514 1214.6495699358602 38.237 2 -0.4340906933299164 0.11773419143937072 0.9438714419765777 ['nc|ENSG00000154645|Q9H9P2-3|CHODL', 'chr21:17917400-18256509|409|12.4|0.24|5.68|+|ENST00000400131|CHODL,CHODL'] 126574 17367 VPPMHLADI True PC9_epitope_Rep2 991.5160878286299 991.51498993586 72.056 2 -0.43413923034586976 0.11776222823773771 0.9438714419765777 ['ENSG00000148843|ENST00000369797|PDCD11'] 60687 20641 LIVTGPLVLI True PC9_epitope_Rep4 1036.68961843316 1036.68852993586 87.552 2 -0.434145631395551 0.11776222823773771 0.9438714419765777 ['ENST00000466502.1_1_3:142300490-142300658:+|nuORF'] 78272 6703 PARQQVPNLE True NCI_RA007_Epitope_Rep4 1150.6094706194997 1150.60836993586 32.405 2 -0.4341646221187009 0.11776222823773771 0.9438714419765777 ['CDK14|p.F103Lfs*39|1|0.23|ENSG00000058091|chr7:90726750-90726750|T/-|frameshift_variant'] 121985 6660 VGQDGQVL True NCI_RA007_Epitope_Rep4 814.4184819623399 814.41738993586 32.239 2 -0.4342945701098407 0.11781129762674929 0.9438714419765777 ['nc|ENSG00000172530|Q8N9N5-3|BANP', 'nc|ENSG00000172530|Q8N9N5-6|BANP', 'nc|ENSG00000172530|Q8N9N5-2|BANP', 'nc|ENSG00000172530|Q8N9N5-7|BANP', 'ENST00000466847.5_1_16:88068919-88110264:+|nuORF'] 96369 11182 SEGLAQLTS True PC9_epitope_Rep3 904.45017601344 904.44962496793 48.016 1 -0.4343227891587066 0.11782631641669078 0.9438714419765777 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 98379 17311 SIHRLTLERP True H1975_Epitope_Rep2 1220.6989543302398 1220.6978499358602 71.88 2 -0.4343514273774431 0.11785434612372749 0.9438714419765777 ['ENSG00000157653|ENST00000374165|C9orf43'] 46548 8806 ITQVKSKHLKD True H1975_Epitope_Rep1 1295.7561348531897 1295.7550299358602 38.798 2 -0.4343621237239363 0.11785434612372749 0.9438714419765777 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 63366 11249 LPEVSGEY True H1975_Epitope_Rep3 892.4178132559998 892.41726496793 48.372 1 -0.43436873916121727 0.11785434612372749 0.9438714419765777 ['ENST00000595146.1_1_19:58721292-58721499:+|nuORF'] 103851 13154 SRKEAVLL True PC9_epitope_Rep6 914.5549158654999 914.55380993586 62.238 2 -0.4345222292704879 0.11790340976797235 0.9438714419765777 ['ENST00000552973.1_1_13:52722507-52730359:-|nuORF', 'nc|ENSG00000136098|P51956-2|NEK3', 'ENSG00000136098|ENST00000610828|NEK3'] 66658 4921 LSSSSHGVP True NCI_RA007_Epitope_Rep2 869.42429561877 869.42318993586 23.761 2 -0.43461961998803167 0.11793143362952371 0.9438714419765777 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 47834 17806 IYSTAFDYF True NCI_RA007_Epitope_Rep5 1125.5018772331298 1125.5007899358602 75.284 2 -0.4346336454429886 0.11793143362952371 0.9438714419765777 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'nc|ENSG00000183506|A4QPH2-2|PI4KAP2', 'nc|ENSG00000183506|A4QPH2-4|PI4KAP2', 'ENST00000467443.5_1_22:21831964-21846319:-|nuORF', 'ENST00000462560.6_1_22:21830876-21842641:-|nuORF', 'nc|ENSG00000290425|Q8N8J0|PI4KAP1', 'ENST00000450651.5_1_22:21841260-21846319:-|nuORF'] 3263 17906 AGFGRRSYLV True PC9_epitope_Rep1 1124.60907669668 1124.6079699358602 73.667 2 -0.43467730094726625 0.11793143362952371 0.9438714419765777 ['ENSG00000205903|ENST00000382252|ZNF316'] 55446 16035 LATVEAAVQRL True PC9_epitope_Rep4 1169.6768219033297 1169.67572993586 69.609 2 -0.43471494979014735 0.11794444066180976 0.9438714419765777 ['ENSG00000137877|ENST00000320955|SPTBN5'] 95817 11528 SDGVAVLKV True PC9_epitope_Rep1 886.5123823471799 886.51128993586 49.222 2 -0.43472158017823587 0.11794444066180976 0.9438714419765777 ['ENSG00000144381|ENST00000388968|HSPD1', 'ENST00000388966.4_1_12:8169981-8170332:-|nuORF', 'ENST00000530524.1_1_8:7748917-7749049:-|nuORF'] 36321 14705 GVGTSLLSTL True PC9_epitope_Rep5 946.53351171458 946.5329649679301 61.567 1 -0.43482860511118904 0.11799244358215051 0.9438714419765777 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3', 'NCOA3|p.K620Nfs*18|1|0.15|ENSG00000124151|chr20:47636241-47636241|A/-|frameshift_variant'] 92931 18535 RRPLLRALF True H1975_Epitope_Rep2 1140.7243812324398 1140.72274490379 76.918 3 -0.43485888606145073 0.11799244358215051 0.9438714419765777 ['ENST00000527418.5_1_1:155023541-155024009:+|nuORF'] 116983 15654 TYPPSGPTVFP True H1975_Epitope_Rep2 1161.57062549929 1161.5695299358601 65.37 2 -0.4348590239893938 0.11799244358215051 0.9438714419765777 ['nc|ENSG00000104763|Q13510-3|ASAH1'] 102171 12030 SPRRWVFVWEK True H1975_Epitope_Rep3 1488.79900272468 1488.7979099358602 51.434 2 -0.4348659702761404 0.11799244358215051 0.9438714419765777 ['nc|ENSG00000135124|Q99571-2|P2RX4'] 121458 13859 VGINKNVYL True NCI_RA007_Epitope_Rep4 1018.5811306133401 1018.58002993586 60.571 2 -0.434883774729276 0.11799244358215051 0.9438714419765777 ['ICE2|p.D131V|1|0.66|ENSG00000128915|chr15:60468077-60468077|T/A|missense_variant'] 8523 4436 ATVSSADGKPP True H1975_Epitope_Rep2 1028.5138388991597 1028.51274993586 22.174 2 -0.43488912791121254 0.11799244358215051 0.9438714419765777 ['ENSG00000168348|ENST00000307169|INSM2'] 101609 20549 SPFEDIFKQCL True H1975_Epitope_Rep1 1325.6325741328499 1325.6314699358602 85.453 2 -0.43489360041999864 0.11799244358215051 0.9438714419765777 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF', 'nc|ENSG00000014138|Q14181-2|POLA2', 'ENST00000533192.1_1_11:65055200-65062124:+|nuORF'] 80495 11324 PLLHTPMYFL True PC9_epitope_Rep2 1230.6471019981798 1230.64546490379 48.88 3 -0.4349121810406456 0.11799244358215051 0.9438714419765777 ['nc|ENSG00000176198|Q8NGC9|OR11H4', 'ENSG00000176198|ENST00000641082|OR11H4', 'OR11H4|p.N52K|1|0.56|ENSG00000176198|chr14:20242947-20242947|T/A|missense_variant'] 45351 10432 ISDFGFAKMVP True NCI_RA007_Epitope_Rep1 1210.60563110902 1210.60452993586 44.562 2 -0.43493055173471123 0.11799244358215051 0.9438714419765777 ['nc|ENSG00000139908|Q6SA08-3|TSSK4', 'nc|ENSG00000139908|Q6SA08|TSSK4', 'ENSG00000139908|ENST00000339917|TSSK4'] 57044 8884 LEEFVITHL True H1975_Epitope_Rep1 1099.5913609438699 1099.59026993586 39.084 2 -0.4349465111384215 0.11799244358215051 0.9438714419765777 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|1|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|92'] 106288 12406 SVQTLPDSH True PC9_epitope_Rep5 982.4719740871799 982.47086993586 52.718 2 -0.4349809923938096 0.11800745417723242 0.9438714419765777 ['ENST00000330817.10_1_22:50294661-50295054:-|nuORF'] 35112 18962 GRRWHRRPRRP True NCI_RA007_Epitope_Rep4 1528.8824470518798 1528.8808049037902 82.014 3 -0.4350346344934617 0.11806950069772983 0.9438714419765777 ['ENST00000527920.5_1_11:65339976-65340141:+|nuORF'] 82879 16343 PVVSIEDPFD True H1975_Epitope_Rep1 1116.5339056374 1116.5333749679298 68.221 1 -0.4350618242706472 0.11806950069772983 0.9438714419765777 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF', 'nc|ENSG00000074800|P06733-2|ENO1', 'nc|ENSG00000108515|P13929-3|ENO3', 'nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'nc|ENSG00000111674|P09104-2|ENO2', 'ENSG00000111674|ENST00000229277|ENO2'] 106459 11818 SVVEDMILK True NCI_RA007_Epitope_Rep5 1032.5525329069999 1032.5514299358601 52.115 2 -0.435063141486194 0.11806950069772983 0.9438714419765777 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000472593.1_1_3:183521690-183528368:+|nuORF', 'ENST00000481343.1_1_3:183525829-183527073:+|nuORF'] 32937 6666 GIRKQWHEDI True NCI_RA007_Epitope_Rep5 1280.6625688215197 1280.66092490379 32.309 3 -0.4351737875571015 0.11808249948948336 0.9438714419765777 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 26861 18572 FLEYSQLAF True PC9_epitope_Rep6 1116.54916177872 1116.5480699358602 84.077 2 -0.4351846582363681 0.11808249948948336 0.9438714419765777 ['ENST00000447998.6_1_5:150089722-150089842:-|nuORF'] 135445 15812 YDYKQGHW True PC9_epitope_Rep5 1095.47739382079 1095.4762899358602 65.81 2 -0.43521421137878635 0.1181275205472459 0.9438714419765777 ['ENSG00000181458|ENST00000323523|TMEM45A'] 100940 5078 SLSPTDHQAAF True NCI_RA007_Epitope_Rep5 1172.5462016566 1172.5451099358602 26.233 2 -0.4352149136019357 0.1181275205472459 0.9438714419765777 ['ENSG00000165914|ENST00000328459|TTC7B', 'nc|ENSG00000165914|Q86TV6-2|TTC7B'] 95598 11114 SATKQPSILS True PC9_epitope_Rep3 1030.56587447202 1030.56476993586 47.749 2 -0.43529350562993846 0.1181275205472459 0.9438714419765777 ['ENSG00000162607|ENST00000339950|USP1'] 81442 15189 PQGRQLLL True PC9_epitope_Rep1 923.5552502186699 923.55414993586 63.245 2 -0.43530390100178296 0.11814252654505854 0.9438714419765777 ['ENSG00000135763|ENST00000258243|URB2'] 36746 9690 GVNWPGSPP True H1975_Epitope_Rep2 909.4344663796498 909.43336993586 42.254 2 -0.43535077807813793 0.11815753203219384 0.9438714419765777 ['ENST00000339007.3_1_19:18507945-18508071:-|nuORF'] 56909 12933 LEDQGVPVT True PC9_epitope_Rep3 956.4814761417199 956.48036993586 54.77 2 -0.43537419004400374 0.11816851561968285 0.9438714419765777 ['AADACL4|p.R366P|1|0.07|ENSG00000204518|chr1:12666608-12666608|G/C|missense_variant'] 57501 9195 LEKMKEERERI True PC9_epitope_Rep3 1459.7816979780298 1459.78006490379 40.306 3 -0.4353821086502666 0.11816851561968285 0.9438714419765777 ['nc|ENSG00000116117|Q8TEW8-6|PARD3B', 'nc|ENSG00000116117|Q8TEW8-3|PARD3B', 'nc|ENSG00000116117|Q8TEW8-2|PARD3B', 'ENSG00000116117|ENST00000406610|PARD3B'] 67088 15144 LTCWYIQKYV True H1975_Epitope_Rep3 1315.6634803383101 1315.6623899358601 63.65 2 -0.4354139591111049 0.11816851561968285 0.9438714419765777 ['ENSG00000274180|ENST00000611551|NATD1'] 140246 11316 YWRRDLERALY True H1975_Epitope_Rep1 1539.7946456202299 1539.79300490379 48.504 3 -0.43552244279011876 0.11820053425892842 0.9438714419765777 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 18734 17422 ELDLMPYTPP True PC9_epitope_Rep6 1174.5580122102601 1174.5569099358602 79.629 2 -0.43553735161340384 0.11823255180862285 0.9438714419765777 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1'] 59991 14508 LHPVSAIISL True PC9_epitope_Rep4 1048.62808080576 1048.6269899358601 63.719 2 -0.43565093734421045 0.11831158446331048 0.9438714419765777 ['ENST00000532485.5_1_11:76734550-76734952:+|nuORF'] 71660 21020 MLSIWILLF True PC9_epitope_Rep5 1134.6511247494598 1134.6500299358602 85.912 2 -0.43568550182743887 0.11831158446331048 0.9438714419765777 ['ENSG00000176988|ENST00000370467|FMR1NB'] 120030 14940 VFDYEAAG True PC9_epitope_Rep4 870.3759484440199 870.3753949679301 65.407 1 -0.43570701867705103 0.11831158446331048 0.9438714419765777 ['ENSG00000130758|ENST00000253055|MAP3K10'] 117598 3836 VAGRWQRP True NCI_RA007_Epitope_Rep4 968.5304324531598 968.52932993586 20.951 2 -0.4357787447508766 0.1183245717007775 0.9438714419765777 ['ENST00000464954.1_1_1:167691224-167691416:+|nuORF'] 12792 16524 DLILNITYKKK True NCI_RA007_Epitope_Rep1 1347.8125871001496 1347.8114899358602 68.389 2 -0.43578541206524324 0.1183245717007775 0.9438714419765777 ['ENST00000450155.5_1_1:112142544-112147029:-|nuORF', 'ENST00000441004.5_1_1:112142544-112147029:-|nuORF'] 29852 18468 FVVRGQPADVF True PC9_epitope_Rep5 1233.6506071554898 1233.64897490379 76.059 3 -0.4358380023279413 0.11835457035436621 0.9438714419765777 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2'] 112330 22910 TMLKLSLTF True PC9_epitope_Rep1 1052.59400379616 1052.59290993586 92.921 2 -0.43584755557071564 0.11835457035436621 0.9438714419765777 ['ENST00000521776.2_1_13:52602562-52602661:+|nuORF'] 87013 5894 QSALSIAKEK True NCI_RA007_Epitope_Rep5 1073.6080736371698 1073.6069699358602 29.358 2 -0.43594239567032417 0.11838255307566685 0.9438714419765777 ['TET3|p.G1454Afs*77|1|0.36|ENSG00000187605|chr2:74101148-74101148|G/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3'] 112123 6809 TLTVTSTLP True NCI_RA007_Epitope_Rep1 931.52261267771 931.52150993586 30.493 2 -0.43594791308785424 0.11838255307566685 0.9438714419765777 ['nc|ENSG00000211891|P01854-1|IGHE', 'nc|ENSG00000211891|P01854-3|IGHE', 'nc|ENSG00000211891|P01854|IGHE', 'ENST00000521393.1_1_14:106188133-106188816:-|nuORF'] 30973 8472 GASYTAQP True PC9_epitope_Rep2 793.3606327330499 793.35952993586 37.954 2 -0.4359512435527209 0.11838255307566685 0.9438714419765777 ['ZFR2|p.R698Gfs*6|1|0.19|ENSG00000105278|chr19:3816685-3816685|G/-|frameshift_variant', 'ENSG00000105278|ENST00000262961|ZFR2', 'nc|ENSG00000105278|Q9UPR6-3|ZFR2'] 79482 11292 PGPSASSLL True PC9_epitope_Rep5 827.43888305375 827.43778993586 48.428 2 -0.43599929612030847 0.11841254720511686 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 3212 6641 AGEVAKEWQEL True H1975_Epitope_Rep3 1258.6193665968597 1258.61826993586 30.499 2 -0.4360046335552006 0.11841254720511686 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF'] 85592 20009 QLLTLASIL True PC9_epitope_Rep5 970.60628273202 970.60518993586 82.019 2 -0.4360702755399984 0.1184275435045163 0.9438714419765777 ['nc|ENSG00000051620|Q9Y5Z4-2|HEBP2', 'ENSG00000051620|ENST00000607197|HEBP2'] 118656 9760 VEAPTTLPP True H1975_Epitope_Rep2 923.4963979298699 923.4958449679301 42.531 1 -0.43610275360448375 0.11844253929373341 0.9438714419765777 ['ENSG00000162231|ENST00000294172|NXF1'] 63385 14469 LPFRIQGQ True PC9_epitope_Rep1 957.5396001545298 957.53850993586 60.479 2 -0.4361111106037967 0.11845753457279423 0.9438714419765777 ['ENST00000564006.5_1_16:77225374-77227441:+|nuORF'] 68254 11036 LTRDSNIIR True PC9_epitope_Rep3 1086.61455599994 1086.6134499358602 47.443 2 -0.4362413041618871 0.11848953903725123 0.9438714419765777 ['nc|ENSG00000164654|Q9NXC5-2|MIOS', 'MIOS|p.N584Ifs*12|1|0.27|ENSG00000164654|chr7:7585736-7585736|A/-|frameshift_variant', 'ENSG00000164654|ENST00000340080|MIOS'] 57759 6432 LENSELKKSLD True H1975_Epitope_Rep1 1274.6717960925398 1274.67068993586 29.801 2 -0.4363120100168825 0.11855556122535763 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 137747 20442 YNLKRTPRRIK True NCI_RA007_Epitope_Rep5 1443.87865002771 1443.87700490379 85.568 3 -0.43637076078855275 0.11858756293373247 0.9438714419765777 ['ENSG00000150594|ENST00000280155|ADRA2A'] 16867 19718 EFTLENIFWP True PC9_epitope_Rep2 1294.6233893481399 1294.6222899358602 81.235 2 -0.43645653840600734 0.11870258869952716 0.9438714419765777 ['ENSG00000116237|ENST00000343813|ICMT'] 11855 4351 DHNDGLGNAF True NCI_RA007_Epitope_Rep4 1058.44173658806 1058.4406299358602 23.082 2 -0.4365085973869829 0.11870258869952716 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 127269 22834 VQLDLTGIFM-[Oxidation] True PC9_epitope_Rep2 1151.58964707215 1151.58854993586 93.32 2 -0.43655126568096286 0.11873256684128172 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 5564 9084 ANLKSLKP True PC9_epitope_Rep3 869.5334521449299 869.53234993586 39.881 2 -0.43655416155730503 0.11873256684128172 0.9438714419765777 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 92663 14382 RRGGGHAG True NCI_RA007_Epitope_Rep3 766.3946672563399 766.39356993586 63.888 2 -0.43665489254987266 0.11874755514737147 0.9438714419765777 ['ENST00000357360.4_1_X:153707219-153707480:-|nuORF'] 75939 9438 NRFILLKP True NCI_RA007_Epitope_Rep4 999.6229358556699 999.62182993586 43.163 2 -0.4366643128821366 0.11876254294363754 0.9438714419765777 ['ENSG00000125170|ENST00000340099|DOK4'] 13541 7766 DPIYQVWED True NCI_RA007_Epitope_Rep1 1163.51350454599 1163.5124099358602 34.197 2 -0.4367800157249656 0.11880548280670726 0.9438714419765777 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 6044 10423 APLTVLDFFE True NCI_RA007_Epitope_Rep5 1150.5910265906998 1150.58992993586 46.72 2 -0.43678828546637805 0.11880548280670726 0.9438714419765777 ['nc|ENSG00000140279|Q9NRD8|DUOX2', 'ENSG00000140279|ENST00000389039|DUOX2', 'ENST00000558383.1_1_15:45393877-45400429:-|nuORF', 'DUOX2|p.A777Lfs*26|1|0.16|ENSG00000140279|chr15:45105648-45105648|C/-|frameshift_variant'] 68897 17157 LVEQSHVVL True PC9_epitope_Rep5 1022.5760452328998 1022.57494993586 71.016 2 -0.43679424453229426 0.11880548280670726 0.9438714419765777 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY', 'ENST00000591753.1_2_17:40715869-40717983:+|nuORF'] 80223 16110 PLAPSWDVDMP True PC9_epitope_Rep3 1226.5641602198598 1226.56306993586 67.117 2 -0.43686473191761543 0.11880548280670726 0.9438714419765777 ['ENSG00000091536|ENST00000647165|MYO15A', 'ENST00000583079.1_1_17:18023566-18025792:+|nuORF'] 108498 19734 TEFKGIPIS True PC9_epitope_Rep5 990.5385970950198 990.53750993586 80.953 2 -0.4368873433770349 0.11881238628054483 0.9438714419765777 ['ENST00000531788.5_1_6:135639727-135754270:-|nuORF', 'nc|ENSG00000135541|Q8N157-2|AHI1', 'ENSG00000135541|ENST00000265602|AHI1'] 68866 19105 LVEEIFQTAK True PC9_epitope_Rep2 1176.6390394122798 1176.6379499358602 78.858 2 -0.4369003596845855 0.11881238628054483 0.9438714419765777 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'ENST00000486937.5_1_21:47666536-47687014:-|nuORF', 'ENST00000494755.1_1_21:47676584-47678938:-|nuORF'] 56315 8467 LDRAGSWKE True H1975_Epitope_Rep3 1060.53015766964 1060.5290699358602 37.553 2 -0.43692547263739984 0.11881238628054483 0.9438714419765777 ['ENST00000403593.8_1_12:113860182-113865900:+|nuORF'] 125129 19311 VLPNRPFGLF True PC9_epitope_Rep5 1158.6549642599398 1158.65332490379 79.326 3 -0.4369495477536875 0.11881238628054483 0.9438714419765777 ['ENSG00000005187|ENST00000289416|ACSM3'] 32725 9028 GHTYHINSI True PC9_epitope_Rep1 1040.5039429218 1040.50284993586 39.576 2 -0.43695833019173874 0.11881238628054483 0.9438714419765777 ['nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C', 'ENSG00000074211|ENST00000382599|PPP2R2C'] 79490 11383 PGPSLSTGL True PC9_epitope_Rep5 827.43888305375 827.43778993586 48.783 2 -0.43697653366785594 0.11882332936575413 0.9438714419765777 ['ENST00000433234.2_11:204190-204341:-|nuORF'] 46016 4380 ISVEMDVTK True NCI_RA007_Epitope_Rep5 1020.5161473982799 1020.51504993586 23.471 2 -0.43697899487766445 0.11882332936575413 0.9438714419765777 ['ENSG00000277586|ENST00000610854|NEFL'] 124889 17735 VLLPCFII True PC9_epitope_Rep1 916.54559705176 916.54448993586 73.016 2 -0.4370007042134709 0.11882332936575413 0.9438714419765777 ['nc|ENSG00000063127|Q9GZN6-2|SLC6A16', 'ENSG00000063127|ENST00000335875|SLC6A16'] 15549 8455 EASLMDQMSSC True H1975_Epitope_Rep3 1200.44609588612 1200.4449899358601 37.507 2 -0.43705541270450415 0.11884723284876307 0.9438714419765777 ['nc|ENSG00000145088|Q96CJ1-2|EAF2', 'ENSG00000145088|ENST00000273668|EAF2'] 4880 7380 ALGENGVIK True PC9_epitope_Rep2 899.5076313199099 899.50652993586 33.768 2 -0.4370691780250925 0.11884723284876307 0.9438714419765777 ['ENST00000496004.5_1_7:151188088-151217094:-|nuORF'] 55159 16550 LANLVGLAE True PC9_epitope_Rep5 898.5123823471799 898.51128993586 68.664 2 -0.4371236175113021 0.11884723284876307 0.9438714419765777 ['ENSG00000121289|ENST00000305768|CEP89', 'nc|ENSG00000121289|Q96ST8-2|CEP89', 'KLHL24-CEP89|1|fusion'] 86188 6531 QPTETPVA True PC9_epitope_Rep1 841.4181476091699 841.41704993586 29.925 2 -0.4371508074256078 0.11884723284876307 0.9438714419765777 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3'] 98190 18014 SIDRYYAVCDP True PC9_epitope_Rep1 1300.57578753272 1300.57468993586 74.083 2 -0.43720140433594956 0.11884723284876307 0.9438714419765777 ['ENSG00000146399|ENST00000275216|TAAR1'] 18011 7444 EIIAKQGG True H1975_Epitope_Rep3 814.45486747106 814.45376993586 33.611 2 -0.4372027650518237 0.11885817266823082 0.9438714419765777 ['nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 125368 14598 VLSSAGFEAI True PC9_epitope_Rep1 992.51786165044 992.51676993586 60.974 2 -0.43721177771499303 0.11885817266823082 0.9438714419765777 ['nc|ENSG00000177752|Q8N8F6-2|YIPF7'] 87793 21022 QVIDQYSI True PC9_epitope_Rep5 964.48656152216 964.48546993586 85.918 2 -0.4372328991392275 0.11885817266823082 0.9438714419765777 ['COL22A1|p.P1254Lfs*174|1|0.29|ENSG00000169436|chr8:138623742-138623742|G/-|frameshift_variant', 'nc|ENSG00000169436|Q8NFW1-2|COL22A1', 'COL22A1|p.G1545Vfs*79|1|0.59|ENSG00000169436|chr8:138591488-138591488|G/-|frameshift_variant', 'ENSG00000169436|ENST00000303045|COL22A1', 'COL22A1|p.W313L|1|0.1|ENSG00000169436|chr8:138826689-138826689|C/A|missense_variant', 'nc|ENSG00000169436|Q8NFW1-3|COL22A1'] 112640 10095 TPEQIEKIY True H1975_Epitope_Rep1 1119.5811901829898 1119.58008993586 43.767 2 -0.4372601748000262 0.11888813328799729 0.9438714419765777 ['ENSG00000086288|ENST00000199447|NME8'] 97297 16050 SFRRTIYL True PC9_epitope_Rep3 1054.5923640033798 1054.59126993586 66.888 2 -0.4372693355412469 0.11888813328799729 0.9438714419765777 ['ENSG00000163510|ENST00000410053|CWC22'] 12760 5109 DLGYMYFYRRI True H1975_Epitope_Rep1 1495.7282058531898 1495.72654490379 24.721 3 -0.4373254123974339 0.11891202719932002 0.9438714419765777 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13'] 66088 12451 LSNNKIQAL True PC9_epitope_Rep1 999.5712942056299 999.57018993586 52.758 2 -0.43734536125541884 0.11891202719932002 0.9438714419765777 ['ENSG00000164342|ENST00000296795|TLR3'] 19896 8188 ELWMHTDP True H1975_Epitope_Rep1 1027.4433168111898 1027.44220993586 36.435 2 -0.437346210331312 0.11891202719932002 0.9438714419765777 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 58821 8850 LFQTRMERP True H1975_Epitope_Rep2 1176.6073624445198 1176.60571490379 39.008 3 -0.43735143438907004 0.11891202719932002 0.9438714419765777 ['ENST00000473607.5_1_3:125854214-125879740:-|nuORF'] 16350 6025 EEKQRAFEI True H1975_Epitope_Rep2 1148.5825871653199 1148.58094490379 28.153 3 -0.4373558871620611 0.11891202719932002 0.9438714419765777 ['nc|ENSG00000089177|Q96L93-2|KIF16B', 'KIF16B|p.K989Rfs*51|1|0.15|ENSG00000089177|chr20:16379036-16379036|T/-|frameshift_variant', 'nc|ENSG00000089177|Q96L93-5|KIF16B', 'nc|ENSG00000089177|Q96L93-6|KIF16B', 'nc|ENSG00000089177|Q96L93-4|KIF16B', 'ENSG00000089177|ENST00000354981|KIF16B'] 63635 24331 LPNLFSVIDYF True PC9_epitope_Rep1 1326.6859896046997 1326.6854749679298 98.418 1 -0.4374315295706861 0.11892296185489903 0.9438714419765777 ['ENSG00000035720|ENST00000265404|STAP1'] 43677 5164 IINGKVGG True PC9_epitope_Rep3 756.4493881677998 756.44828993586 24.949 2 -0.43748838251199684 0.11892296185489903 0.9438714419765777 ['ENST00000515580.1_1_6:53364966-53365137:-|nuORF'] 3828 10471 AGWEQRELP True H1975_Epitope_Rep2 1084.53015766964 1084.5290699358602 45.294 2 -0.4375040332942831 0.11892296185489903 0.9438714419765777 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2', 'nc|ENSG00000198373|O00308-4|WWP2'] 55547 19299 LAYVAENGT True PC9_epitope_Rep2 936.4552613938799 936.45416993586 79.608 2 -0.4375672717168512 0.1189359170491246 0.9438714419765777 ['ENST00000555638.5_1_14:67940311-67953837:-|nuORF'] 46214 8441 ITDNPGLQ True PC9_epitope_Rep1 856.42904664604 856.4279499358599 37.305 2 -0.43758104074013277 0.1189359170491246 0.9438714419765777 ['ENSG00000150261|ENST00000279783|OR8K1'] 11225 11761 DENINVLDLY True H1975_Epitope_Rep2 1206.57683307854 1206.5757299358602 50.314 2 -0.4375853840431151 0.11895089323655895 0.9438714419765777 ['ENSG00000174145|ENST00000309447|NWD2'] 98661 15046 SIPVFDLLI True PC9_epitope_Rep1 1015.5953836951498 1015.59428993586 62.693 2 -0.43763876937343965 0.11896182479518645 0.9438714419765777 ['ENSG00000130313|ENST00000252603|PGLS'] 129632 8467 VTHEQGTVL True PC9_epitope_Rep4 982.5083595959 982.50726993586 40.038 2 -0.4376524496918223 0.11896182479518645 0.9438714419765777 ['ENSG00000108830|ENST00000587250|RND2'] 116167 14562 TVTGVSLSIV True PC9_epitope_Rep2 974.56481184286 974.56370993586 61.283 2 -0.4376539445588259 0.11896182479518645 0.9438714419765777 ['ENST00000396267.1_2_17:8272399-8272447:-|nuORF'] 93293 22833 RRRWVRLRRRD True PC9_epitope_Rep1 1623.9770757127096 1623.9759699358601 92.624 2 -0.43766205482247633 0.11899177374396627 0.9438714419765777 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 72702 5035 MYNLFCINNK True NCI_RA007_Epitope_Rep1 1258.5838501186197 1258.5827499358602 23.669 2 -0.43766670595792356 0.11899177374396627 0.9438714419765777 ['ENST00000490434.5_1_3:121605231-121605306:+|nuORF'] 120033 13992 VFDYEAAG True PC9_epitope_Rep6 870.3759484440199 870.3753949679301 65.677 1 -0.4376955992516949 0.11900674745483285 0.9438714419765777 ['ENSG00000130758|ENST00000253055|MAP3K10'] 17661 11148 EHRKDLGL True PC9_epitope_Rep4 966.5246783663798 966.52358993586 50.66 2 -0.4377819754679936 0.11901969781947348 0.9438714419765777 ['ENST00000590143.5_1_18:12662154-12700964:-|nuORF', 'ENSG00000101624|ENST00000262127|CEP76', 'nc|ENSG00000101624|Q8TAP6-2|CEP76'] 93788 12347 RTWLPWRRIMK True NCI_RA007_Epitope_Rep2 1541.8765418527298 1541.8748849037902 52.633 3 -0.4377937660063415 0.11901969781947348 0.9438714419765777 ['ENST00000442868.1_1_1:202822165-202825009:-|nuORF'] 98413 13612 SIILYNNDI True PC9_epitope_Rep3 1063.55497543515 1063.5538699358601 57.422 2 -0.43787109180730405 0.11903467029231815 0.9438714419765777 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 13459 12755 DPANEKLLTVF True H1975_Epitope_Rep3 1245.6605031328502 1245.6599749679299 54.275 1 -0.4378779662139354 0.1190496422562499 0.9438714419765777 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'ENST00000505378.5_1_4:99182716-99313239:+|nuORF', 'ENST00000507303.5_1_4:99182716-99313239:+|nuORF', 'ENST00000503745.1_1_4:99273670-99308609:+|nuORF', 'ENST00000511379.5_1_4:99182716-99300325:+|nuORF'] 47288 15639 IYFKKPLNI True PC9_epitope_Rep1 1134.68011637862 1134.67846490379 64.976 3 -0.43794620349577207 0.119094555094827 0.9438714419765777 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1'] 58093 16210 LERSARWWR True PC9_epitope_Rep5 1258.6683229082998 1258.66666490379 67.344 3 -0.4379819693345097 0.119094555094827 0.9438714419765777 ['SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 5062 15638 ALLLLC[Carbamidomethyl]GEDD True H1975_Epitope_Rep1 1117.53252601784 1117.53197496793 65.438 1 -0.43803710835463094 0.119094555094827 0.9438714419765777 ['ENSG00000164111|ENST00000296511|ANXA5', 'ENST00000506395.5_1_4:122589625-122599515:-|nuORF'] 12541 9750 DLCFYYYFYFF True NCI_RA007_Epitope_Rep2 1589.65772625153 1589.65662993586 42.546 2 -0.4381379378598995 0.11914148795160248 0.9438714419765777 ['ENST00000557252.1_1_12:56743718-56743955:-|nuORF'] 102078 9710 SPPSPSSPLP True H1975_Epitope_Rep3 964.48656152216 964.48546993586 42.369 2 -0.4381549012104941 0.11914148795160248 0.9438714419765777 ['ENST00000575425.1_1_17:7239912-7245270:+|nuORF', 'ENST00000570457.6_1_17:7239900-7240612:+|nuORF'] 80895 17992 PLYIGEVVL True NCI_RA007_Epitope_Rep3 1001.57973363101 1001.57862993586 78.839 2 -0.43818913726207565 0.11917344979353238 0.9438714419765777 ['ENSG00000255154|ENST00000461393|HTD2'] 61891 6662 LLLHSLCPP True H1975_Epitope_Rep3 991.55247333735 991.55136993586 30.577 2 -0.4382693297084613 0.11920541054921152 0.9438714419765777 ['ENST00000526097.1_1_8:11418120-11421614:+|nuORF'] 863 7814 ADITISLDGVP True H1975_Epitope_Rep1 1099.57610480255 1099.5750099358602 35.01 2 -0.438363629030771 0.11922037757650937 0.9438714419765777 ['ENSG00000158555|ENST00000336898|GDPD5', 'ENST00000533911.1_1_11:75154120-75160980:-|nuORF', 'ENST00000527322.5_1_11:75154120-75168815:-|nuORF', 'nc|ENSG00000158555|Q8WTR4-5|GDPD5', 'nc|ENSG00000158555|Q8WTR4-4|GDPD5', 'nc|ENSG00000158555|Q8WTR4-3|GDPD5', 'nc|ENSG00000158555|Q8WTR4-2|GDPD5'] 39238 6407 HLKRRDQYEHS True NCI_RA007_Epitope_Rep1 1467.73310799283 1467.73147490379 28.947 3 -0.43839748206084217 0.1192333180404751 0.9438714419765777 ['ENST00000280756.8_1_12:107365296-107365347:+|nuORF'] 85761 18478 QLVQTQCL True PC9_epitope_Rep5 931.4797023199098 931.47860993586 76.097 2 -0.43840839173927665 0.1192333180404751 0.9438714419765777 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 55837 11271 LDERNRLLGEY True H1975_Epitope_Rep2 1376.7048275563197 1376.70372993586 48.399 2 -0.43846292443366575 0.11924423148808917 0.9438714419765777 ['ENST00000526500.5_1_11:111859671-111889757:+|nuORF', 'nc|ENSG00000150764|Q155Q3-2|DIXDC1', 'ENSG00000150764|ENST00000440460|DIXDC1'] 111645 20583 TLNTTYSFL True PC9_epitope_Rep5 1058.52842633414 1058.52732993586 84.22 2 -0.4384926012198769 0.11924423148808917 0.9438714419765777 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000504459.5_1_5:74009375-74016573:+|nuORF'] 80694 11960 PLPVPPPTG True PC9_epitope_Rep4 873.49600400705 873.49490993586 53.796 2 -0.4385103716733507 0.11924423148808917 0.9438714419765777 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 88415 9133 QYRRVIGMFYK True PC9_epitope_Rep5 1459.7758247519498 1459.77418490379 40.076 3 -0.4385215182226335 0.1192450137610003 0.9438714419765777 ['ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 118260 11815 VCMRAALLL True PC9_epitope_Rep4 988.5561788187998 988.55508993586 53.214 2 -0.43852918402135355 0.1192450137610003 0.9438714419765777 ['ENST00000324822.15_1_17:7293318-7293747:-|nuORF'] 93126 4082 RRRRFPPYYMR True NCI_RA007_Epitope_Rep2 1596.8572033904798 1596.85555490379 20.516 3 -0.4385668410757142 0.1192450137610003 0.9438714419765777 ['ENSG00000065978|ENST00000321358|YBX1'] 70007 16971 LYGEYDLSTNE True NCI_RA007_Epitope_Rep4 1302.5615769372196 1302.56046993586 73.555 2 -0.4385785513948995 0.1192450137610003 0.9438714419765777 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 37799 6023 HCRLLWRMQDY True PC9_epitope_Rep4 1519.71765825283 1519.71601490379 30.147 3 -0.438590027716322 0.1192450137610003 0.9438714419765777 ['ENST00000257836.3_1_11:32874897-32874975:+|nuORF'] 69571 12763 LVTREGDAI True PC9_epitope_Rep3 972.5240096600398 972.52290993586 54.112 2 -0.43859429512553166 0.1192450137610003 0.9438714419765777 ['MDGA2|p.T529A|1|0.47|ENSG00000139915|chr14:47035245-47035245|T/C|missense_variant'] 96522 16906 SELLCYFIII True PC9_epitope_Rep1 1212.6464332918401 1212.6453299358602 69.853 2 -0.4386245159598123 0.1192450137610003 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 15121 17379 EAEDSSDESL True PC9_epitope_Rep4 1080.40949296992 1080.4083899358602 74.851 2 -0.43865383173896644 0.1192450137610003 0.9438714419765777 ['nc|ENSG00000204851|Q9ULN7-1|PNMA8B', 'ENSG00000204851|ENST00000599531|PNMA8B'] 100962 15208 SLSSHVYSFI True PC9_epitope_Rep2 1138.5658744720201 1138.56476993586 63.76 2 -0.4386597235518687 0.1192599765557311 0.9438714419765777 ['ENST00000502732.5_1_1:179076600-179076849:-|nuORF'] 33457 6929 GLGLVGGNV True NCI_RA007_Epitope_Rep2 784.44430278736 784.44320993586 31.572 2 -0.43877230814511603 0.11927493884207666 0.9438714419765777 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 64025 5389 LQDAYMRIF True NCI_RA007_Epitope_Rep2 1155.57466533391 1155.5735699358602 25.582 2 -0.43880449575771935 0.1192878741548602 0.9438714419765777 ['nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5'] 67412 20179 LTEALENAGI True PC9_epitope_Rep4 1029.5342399905699 1029.5331499358601 85.756 2 -0.4388722035330989 0.1192878741548602 0.9438714419765777 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 54905 13436 LAGPALSTVP True H1975_Epitope_Rep2 924.52803241132 924.52692993586 56.815 2 -0.4390771891080779 0.11942174732872407 0.9438714419765777 ['ENSG00000163788|ENST00000296088|SNRK'] 82656 20033 PVLQFCYAFLQ True PC9_epitope_Rep2 1327.66348033831 1327.6618349037901 82.46 3 -0.4390836510523276 0.11943264820791574 0.9438714419765777 ['ENSG00000142197|ENST00000691173|DOP1B', 'nc|ENSG00000142197|Q9Y3R5-2|DOP1B'] 91843 7379 RPNDSRMLVA True PC9_epitope_Rep3 1157.59752603681 1157.59588490379 33.393 3 -0.4390966732112309 0.11943264820791574 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 33840 9322 GLVKSNSVP True PC9_epitope_Rep2 899.5076313199099 899.50652993586 41.196 2 -0.4391015768280477 0.11943264820791574 0.9438714419765777 ['ENSG00000149289|ENST00000278590|ZC3H12C', 'nc|ENSG00000149289|Q9C0D7-2|ZC3H12C'] 102254 10588 SPTGGFVDA True PC9_epitope_Rep6 849.3868474808899 849.3862949679301 51.542 1 -0.43925474834883954 0.11948157836625843 0.9438714419765777 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 5503 19997 AMTQLLAGV True PC9_epitope_Rep4 902.4895387276199 902.48844993586 85.051 2 -0.43927319802235143 0.11949044585987262 0.9438714419765777 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 47711 16037 IYPWVHVVI True NCI_RA007_Epitope_Rep5 1124.6382515666398 1124.6371499358602 68.414 2 -0.4392979447585306 0.11949044585987262 0.9438714419765777 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3'] 45794 16338 ISNWFDYI True PC9_epitope_Rep5 1056.4916469026 1056.4905499358601 67.841 2 -0.43929960507119376 0.11949044585987262 0.9438714419765777 ['ENSG00000154007|ENST00000284142|ASB17'] 58249 6330 LETAAPAPRPY True NCI_RA007_Epitope_Rep3 1184.61897267404 1184.6178699358602 31.904 2 -0.439315062403393 0.11949044585987262 0.9438714419765777 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 67830 10099 LTIGHKYPSKE True H1975_Epitope_Rep1 1271.68738658703 1271.68628993586 43.782 2 -0.4393847042209695 0.11950134175753252 0.9438714419765777 ['ENSG00000165730|ENST00000298596|STOX1'] 96620 7393 SEMSPVPMRSA True H1975_Epitope_Rep2 1190.54237922946 1190.54128993586 33.379 2 -0.4393930570352435 0.11950134175753252 0.9438714419765777 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6'] 97236 10205 SFLRCYRP True PC9_epitope_Rep2 1040.5225701913998 1040.52146993586 44.59 2 -0.43940867379232074 0.11950134175753252 0.9438714419765777 ['ENST00000392975.6_1_17:61511323-61511650:-|nuORF'] 16697 9565 EEVGTPHQDVP True PC9_epitope_Rep3 1206.55168095986 1206.5505899358602 41.743 2 -0.43950568877847906 0.11953328011684981 0.9438714419765777 ['ENSG00000125872|ENST00000378858|LRRN4'] 91844 7472 RPNDSRMLVA True PC9_epitope_Rep3 1157.59752603681 1157.59588490379 33.745 3 -0.43956776693950017 0.11954620335931794 0.9438714419765777 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23'] 6563 4952 APVSGGVGA True PC9_epitope_Rep4 713.37080349393 713.37025496793 25.651 1 -0.43958497177334477 0.11954620335931794 0.9438714419765777 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 12530 5433 DLAPTPQVR True NCI_RA007_Epitope_Rep1 995.5399940773499 995.53888993586 25.204 2 -0.43962044622040347 0.11956115621072654 0.9438714419765777 ['ENSG00000260734|ENST00000561754|TLE7'] 19534 16863 ELQQVLQLSL True PC9_epitope_Rep2 1169.6655885132898 1169.66448993586 70.111 2 -0.43963237286432433 0.11956798614295175 0.9438714419765777 ['ENSG00000076513|ENST00000261739|ANKRD13A'] 18360 9523 EIYFRKGK True H1975_Epitope_Rep1 1039.5814649665099 1039.58036993586 41.552 2 -0.439674188574824 0.11956798614295175 0.9438714419765777 ['ENSG00000172766|ENST00000379406|NAA16'] 132689 16261 VYSDIVGKI True PC9_epitope_Rep1 992.5542471591599 992.55314993586 67.367 2 -0.4396790155183328 0.11956798614295175 0.9438714419765777 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 40526 9857 HSNSDCGK True PC9_epitope_Rep1 846.32901533494 846.32790993586 42.774 2 -0.43969748096670713 0.11956798614295175 0.9438714419765777 ['nc|ENSG00000159917|Q14590-2|ZNF235', 'ENSG00000159917|ENST00000291182|ZNF235'] 9371 24059 AVVDEFWLL True PC9_epitope_Rep3 1090.5698972233 1090.5688099358601 97.828 2 -0.43970161260161883 0.11956798614295175 0.9438714419765777 ['ENSG00000107554|ENST00000324109|DNMBP'] 21649 8656 ERTSFNYAM-[Oxidation] True PC9_epitope_Rep1 1133.4811592523297 1133.48006993586 38.134 2 -0.4397503938494257 0.11960877538545134 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 43228 10666 IGYGTLPYFYG True H1975_Epitope_Rep1 1249.6019256275697 1249.60082993586 45.985 2 -0.43976112021500047 0.11960877538545134 0.9438714419765777 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'nc|ENSG00000141449|Q9C091-4|GREB1L', 'ENST00000578368.5_1_18:18963479-19048745:+|nuORF', 'ENST00000584446.5_1_18:18963479-19034595:+|nuORF'] 77803 19296 PAEPAFLA True PC9_epitope_Rep2 814.4225047136199 814.4219549679301 79.596 1 -0.4397762012456659 0.11960877538545134 0.9438714419765777 ['ENSG00000163807|ENST00000296121|KIAA1143'] 109402 5851 TGPNVKAVAT True NCI_RA007_Epitope_Rep3 956.5290950404799 956.52798993586 29.993 2 -0.43980257960547264 0.11960877538545134 0.9438714419765777 ['ENSG00000028839|ENST00000237264|TBPL1'] 30479 12406 GAGLRSHARI True H1975_Epitope_Rep1 1036.5890099584399 1036.5879099358601 52.754 2 -0.4398300778689431 0.11960877538545134 0.9438714419765777 ['ENSG00000171161|ENST00000306562|ZNF672'] 8379 4657 ATNRPDAL True PC9_epitope_Rep4 856.4402800360799 856.43918993586 24.437 2 -0.4399226327888427 0.11963867286990186 0.9438714419765777 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 62277 21795 LLQKYNMQFLI True H1975_Epitope_Rep2 1409.7740934164497 1409.77298993586 90.141 2 -0.4399409985524803 0.11963867286990186 0.9438714419765777 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 28617 11541 FSRGSELTL True PC9_epitope_Rep6 1008.52400966004 1008.52290993586 55.483 2 -0.43998803845576656 0.11964752623179055 0.9438714419765777 ['ENSG00000180479|ENST00000451802|ZNF571'] 11043 23833 DDMGFGLFD True PC9_epitope_Rep1 1015.3956979124299 1015.39460993586 96.472 2 -0.44001747634216465 0.11964752623179055 0.9438714419765777 ['nc|ENSG00000137818|P05386-2|RPLP1', 'ENSG00000137818|ENST00000260379|RPLP1', 'ENST00000487304.6_1_15:69747454-69747843:+|nuORF', 'ENSG00000177600|ENST00000321153|RPLP2', 'ENST00000525722.1_1_11:811587-812833:+|nuORF', 'ENST00000532004.5_1_11:810000-812833:+|nuORF', 'ENST00000526222.5_1_11:810419-812833:+|nuORF', 'ENST00000527517.1_1_11:812371-812833:+|nuORF'] 58956 21674 LFYFQCIEYI True PC9_epitope_Rep3 1337.63659688413 1337.63548993586 88.668 2 -0.4400626710403255 0.11964752623179055 0.9438714419765777 ['nc|ENSG00000179119|Q68D10-3|SPTY2D1'] 110566 4996 TISDFMSP True H1975_Epitope_Rep3 896.39496963644 896.39386993586 24.346 2 -0.4400695658812027 0.11964752623179055 0.9438714419765777 ['ENST00000529825.5_1_11:13299386-13376821:+|nuORF', 'nc|ENSG00000133794|O00327-3|BMAL1', 'nc|ENSG00000133794|O00327-5|BMAL1', 'nc|ENSG00000133794|O00327-4|BMAL1', 'nc|ENSG00000133794|O00327-6|BMAL1', 'nc|ENSG00000133794|O00327-8|BMAL1', 'ENSG00000133794|ENST00000403290|BMAL1'] 33904 4944 GLYHSQKVL True NCI_RA007_Epitope_Rep3 1043.5763795860698 1043.5752899358602 26.443 2 -0.4401038173945921 0.11969439728353141 0.9438714419765777 ['ENSG00000182631|ENST00000330120|RXFP3'] 5766 10550 APEEQLKAP True PC9_epitope_Rep1 981.5131106231697 981.51200993586 45.471 2 -0.4401293164358806 0.11969439728353141 0.9438714419765777 ['ENSG00000243708|ENST00000458483|PLA2G4B', 'nc|ENSG00000243708|P0C869-8|PLA2G4B', 'nc|ENSG00000243708|P0C869-6|PLA2G4B', 'nc|ENSG00000243708|P0C869-7|PLA2G4B', 'ENST00000487292.1_3_15:42132349-42136005:+|nuORF', 'ENST00000491746.5_1_15:42132349-42135875:+|nuORF', 'ENST00000490848.5_1_15:42132349-42134687:+|nuORF'] 41736 9237 IDNQNLLFELS True H1975_Epitope_Rep1 1304.66123140884 1304.6601299358601 40.439 2 -0.4402016826787136 0.1197242878000747 0.9438714419765777 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1', 'ENST00000545893.5_1_17:38345052-38350037:+|nuORF'] 126733 21565 VPRWLRPWW True PC9_epitope_Rep6 1294.7087311683 1294.70762993586 95.826 2 -0.4402397100820434 0.1197242878000747 0.9438714419765777 ['ENST00000481206.1_1_14:105935538-105936549:+|nuORF'] 18618 7382 ELALCMLP True NCI_RA007_Epitope_Rep1 888.44489703432 888.44378993586 32.708 2 -0.44031986416124236 0.11972906905683439 0.9438714419765777 ['ENSG00000171017|ENST00000306708|LRRC8E'] 115930 11203 TVPLTFATP True PC9_epitope_Rep1 945.5171333744499 945.51602993586 47.974 2 -0.4403372764563902 0.11972906905683439 0.9438714419765777 ['nc|ENSG00000165837|Q5W0A0-2|ERICH6B', 'ENSG00000165837|ENST00000298738|ERICH6B'] 93069 2663 RRRKRKKRK True NCI_RA007_Epitope_Rep3 1310.8959718576996 1310.89432490379 14.949 3 -0.4403800043235934 0.11972906905683439 0.9438714419765777 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 102599 9488 SQANVVVKI True PC9_epitope_Rep6 956.5654805492 956.56438993586 46.748 2 -0.4404094904313216 0.11972906905683439 0.9438714419765777 ['ENSG00000100219|ENST00000344347|XBP1'] 24492 21488 FAIPLIEKL True PC9_epitope_Rep2 1042.64266824074 1042.6415699358602 88.124 2 -0.44042713133159594 0.11972906905683439 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 106210 17119 SVPNKDVFQEL True PC9_epitope_Rep2 1274.65066672514 1274.6495699358602 71.097 2 -0.44043175850922484 0.11972906905683439 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 76 6834 AAAKDLTGV True PC9_epitope_Rep5 844.4654321547599 844.46432993586 31.258 2 -0.440443931197483 0.1197609872854742 0.9438714419765777 ['ENSG00000140743|ENST00000268383|CDR2'] 44294 15780 ILWKEMDQLPV True NCI_RA007_Epitope_Rep1 1370.72680887086 1370.72570993586 65.476 2 -0.440451255644158 0.11977389621632632 0.9438714419765777 ['ENSG00000125484|ENST00000372146|GTF3C4'] 98421 21443 SIIPPLFTV True PC9_epitope_Rep6 985.58481901145 985.58427496793 95.357 1 -0.44049062272134804 0.11977389621632632 0.9438714419765777 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 3520 8057 AGLTQSIPIL True NCI_RA007_Epitope_Rep4 1011.5964463243098 1011.59534993586 37.766 2 -0.44064421031559464 0.1198017449163187 0.9438714419765777 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 140938 13392 YYYVKNII True NCI_RA007_Epitope_Rep4 1074.57498260374 1074.57388993586 58.685 2 -0.44064853401332355 0.1198017449163187 0.9438714419765777 ['ENSG00000158711|ENST00000357992|ELK4', 'nc|ENSG00000158711|P28324-2|ELK4'] 41530 18163 IDAYFQPCQD True H1975_Epitope_Rep2 1198.49647458286 1198.49536993586 75.279 2 -0.4406714479063181 0.1198017449163187 0.9438714419765777 ['nc|ENSG00000020219|A6NM43|CCT8L1P'] 27610 8310 FPTGSQPA True NCI_RA007_Epitope_Rep3 803.38136817763 803.38026993586 39.805 2 -0.4407642757502669 0.1198635368399613 0.9438714419765777 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 55255 6986 LAQKTTTL True NCI_RA007_Epitope_Rep2 874.51238234718 874.51128993586 31.796 2 -0.4407762975278937 0.1198635368399613 0.9438714419765777 ['ENSG00000168280|ENST00000435030|KIF5C', 'nc|ENSG00000168280|O60282-2|KIF5C', 'ENST00000460377.1_2:149835462-149853923:+|nuORF'] 98359 5572 SIHENFSQA True PC9_epitope_Rep6 1031.4672230599099 1031.4661299358602 29.474 2 -0.44084795991261305 0.1198635368399613 0.9438714419765777 ['ENSG00000125633|ENST00000376300|CCDC93'] 16480 7273 EELVRRNVEL True PC9_epitope_Rep1 1255.6884492161898 1255.68679490379 32.788 3 -0.44087844664583986 0.11987847516887878 0.9438714419765777 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 42606 6819 IETAVTSTP True NCI_RA007_Epitope_Rep1 917.4705771048501 917.46948993586 30.531 2 -0.4408872912835802 0.11992735789813133 0.9438714419765777 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant', 'ENST00000465486.6_1_9:134065776-134072618:+|nuORF', 'ENST00000525980.5_1_9:134025776-134070755:+|nuORF'] 116041 9115 TVRQGDTAI True PC9_epitope_Rep2 959.5036085686298 959.50250993586 40.401 2 -0.4410098496849284 0.11997013050930876 0.9438714419765777 ['ENSG00000185565|ENST00000490035|LSAMP'] 101292 13652 SLWYQQTL True PC9_epitope_Rep3 1037.51819600361 1037.5170899358602 57.577 2 -0.44105004232899053 0.11997013050930876 0.9438714419765777 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 96987 10413 SEVLRTVQP True PC9_epitope_Rep1 1027.56620882519 1027.5651099358602 44.938 2 -0.4410601418319333 0.11997013050930876 0.9438714419765777 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 111497 8482 TLLLQHTDP True NCI_RA007_Epitope_Rep1 1036.5553097883198 1036.5542099358602 36.993 2 -0.4411208414292699 0.11997013050930876 0.9438714419765777 ['ENST00000579053.5_1_18:691132-706776:-|nuORF'] 56734 8644 LEALAAHAIT True H1975_Epitope_Rep1 1008.5603951687601 1008.55928993586 38.178 2 -0.44117344310632217 0.12001697072549851 0.9438714419765777 ['nc|ENSG00000179057|Q8N9C0|IGSF22', 'ENSG00000179057|ENST00000513874|IGSF22'] 66922 13625 LSYFLISPP True PC9_epitope_Rep5 1035.5640835668698 1035.56298993586 57.431 2 -0.44117857061263177 0.12001697072549851 0.9438714419765777 ['ENSG00000128536|ENST00000317716|CDHR3'] 36698 9052 GVMFPGNAP True PC9_epitope_Rep2 888.4163737873598 888.41526993586 40.165 2 -0.4412291156464203 0.12001764715863777 0.9438714419765777 ['ENST00000429866.1_1_3:195664216-195664672:+|nuORF'] 77975 15592 PALICLHPLFI True PC9_epitope_Rep2 1235.71003660791 1235.7089299358602 65.25 2 -0.4412324841173523 0.12001764715863777 0.9438714419765777 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 128625 13863 VSLAWWFL True PC9_epitope_Rep2 1020.5432885526399 1020.54218993586 58.607 2 -0.4412356845516838 0.12001764715863777 0.9438714419765777 ['ENST00000476877.1_1_20:55746017-55748543:-|nuORF'] 121212 13748 VGGPEIEVG True PC9_epitope_Rep4 855.4337976733099 855.43270993586 60.778 2 -0.4412653076848156 0.12001764715863777 0.9438714419765777 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 78023 5697 PALPAQAK True NCI_RA007_Epitope_Rep5 794.46503823194 794.46394993586 28.6 2 -0.4412760235735151 0.12001764715863777 0.9438714419765777 ['nc|ENSG00000105122|Q86YV0-2|RASAL3', 'ENSG00000105122|ENST00000343625|RASAL3'] 23137 7996 EVNATLGR True NCI_RA007_Epitope_Rep1 858.4559301002199 858.4553849679301 35.095 1 -0.441380247493592 0.12001764715863777 0.9438714419765777 ['ENSG00000106479|ENST00000223210|ZNF862'] 23551 6898 EWWFRWRLDRY True H1975_Epitope_Rep1 1711.8371791385498 1711.8355349037902 31.573 3 -0.44138110720506785 0.12001764715863777 0.9438714419765777 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 124708 15382 VLKETTGL True PC9_epitope_Rep3 859.5014833103099 859.50038993586 64.323 2 -0.4413829394971632 0.12001764715863777 0.9438714419765777 ['ENST00000581398.1_1_4:1245665-1246076:+|nuORF'] 99163 8580 SLAQQLEKHQL True H1975_Epitope_Rep1 1293.70409928033 1293.70300993586 37.929 2 -0.44146252807328756 0.12004750996860948 0.9438714419765777 ['ENSG00000070371|ENST00000427926|CLTCL1'] 68543 8455 LTWEFHPP True PC9_epitope_Rep1 1025.4970666362099 1025.49596993586 37.358 2 -0.44146707688671427 0.12004750996860948 0.9438714419765777 ['ENST00000397722.5_1_16:446739-446817:+|nuORF'] 76995 9379 NVSVVDLTC[Carbamidomethyl]R True H1975_Epitope_Rep3 1161.58120754576 1161.58010993586 41.076 2 -0.44149112790623324 0.12011130529209156 0.9438714419765777 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 37267 11335 GVVKNNFVP True NCI_RA007_Epitope_Rep3 972.5392658013599 972.53816993586 51.703 2 -0.44150210355012165 0.12011130529209156 0.9438714419765777 ['nc|ENSG00000110680|P06881|CALCA'] 56452 14038 LDSRSQLIG True PC9_epitope_Rep1 987.53490869691 987.53380993586 58.835 2 -0.44154050568131625 0.12012419620285379 0.9438714419765777 ['ENST00000333677.6_1_5:149011902-149012052:+|nuORF'] 27951 8700 FQRGYYRYYNK True NCI_RA007_Epitope_Rep2 1556.75244645508 1556.7508049037901 38.489 3 -0.4415452849547686 0.12012419620285379 0.9438714419765777 ['nc|ENSG00000241468|P56134-2|ATP5MF', 'ENSG00000241468|ENST00000292475|ATP5MF', 'ENST00000491560.1_1_7:99055952-99057898:-|nuORF', 'ENST00000481899.1_1_7:99056719-99057898:-|nuORF'] 66383 6264 LSRCPDLRPGK True NCI_RA007_Epitope_Rep2 1240.6710253302397 1240.66936490379 28.97 3 -0.4416235853612683 0.12015609093993893 0.9438714419765777 ['ENST00000552233.5_1_12:53823563-53823812:+|nuORF'] 116593 19334 TYGEIFEKF True PC9_epitope_Rep4 1132.54407639828 1132.5429699358601 82.475 2 -0.44165264742357113 0.12016694094294487 0.9438714419765777 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 10600 5271 CRTLEEVTA True PC9_epitope_Rep4 1020.4909952795999 1020.48988993586 26.974 2 -0.4416597116129341 0.12016694094294487 0.9438714419765777 ['ENSG00000168566|ENST00000342415|SNRNP48', 'nc|ENSG00000168566|Q6IEG0-2|SNRNP48'] 82452 10675 PVDNLVIK True H1975_Epitope_Rep1 896.53311779176 896.53256496793 46.02 1 -0.4416852231349694 0.12016694094294487 0.9438714419765777 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 18181 13462 EIQILKEEHQK True H1975_Epitope_Rep3 1393.75652877601 1393.75542993586 57.056 2 -0.4418740631343517 0.12028365906623235 0.9438714419765777 ['ENSG00000203872|ENST00000388923|C6orf163'] 4011 9593 AHIEDPED True PC9_epitope_Rep5 924.3824903764399 924.3813899358599 41.86 2 -0.44191505397666986 0.12029654259831032 0.9438714419765777 ['ENSG00000116497|ENST00000373475|S100PBP', 'nc|ENSG00000116497|Q96BU1-2|S100PBP', 'ENST00000531123.5_1_1:33290993-33299636:+|nuORF', 'ENST00000356689.7_1_1:33290993-33299636:+|nuORF'] 129104 9007 VTAVSLPR True PC9_epitope_Rep2 841.5021520166499 841.50104993586 39.997 2 -0.44192124990594506 0.12029654259831032 0.9438714419765777 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 97538 7814 SGTSDPYVKI True NCI_RA007_Epitope_Rep3 1065.5342399905699 1065.5331499358601 37.855 2 -0.4420361711809459 0.12031146623237823 0.9438714419765777 ['ENSG00000170743|ENST00000318881|SYT9'] 69132 11714 LVLKSPSLQP True H1975_Epitope_Rep3 1080.6542955536 1080.6531899358602 50.198 2 -0.4420814689680618 0.12036031756802605 0.9438714419765777 ['ENST00000273411.2_1_3:134070904-134075258:-|nuORF'] 100658 21284 SLQTKQRRP True PC9_epitope_Rep5 1112.6414394541198 1112.64034993586 86.922 2 -0.44212260017612953 0.12037319762510602 0.9438714419765777 ['nc|ENSG00000182132|Q9NZI2|KCNIP1', 'ENSG00000182132|ENST00000328939|KCNIP1', 'nc|ENSG00000182132|Q9NZI2-5|KCNIP1'] 35937 11213 GVAPGTTLAP True PC9_epitope_Rep4 882.4810822188999 882.47998993586 50.907 2 -0.44213564061613986 0.12037319762510602 0.9438714419765777 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 137084 23593 YLATFFWML True PC9_epitope_Rep5 1190.58343911246 1190.58234993586 95.733 2 -0.4422034413491919 0.12040508218690099 0.9438714419765777 ['ENST00000459892.5_1_2:26531956-26538428:-|nuORF', 'nc|ENSG00000173567|Q8IZF5-2|ADGRF3', 'nc|ENSG00000173567|Q8IZF5-3|ADGRF3', 'ENSG00000173567|ENST00000651242|ADGRF3', 'nc|ENSG00000173567|Q8IZF5|ADGRF3'] 139954 13096 YVIEDDVNM-[Oxidation] True PC9_epitope_Rep4 1112.46959150912 1112.4684899358601 58.266 2 -0.4422367710609346 0.12042000271407247 0.9438714419765777 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000468414.1_1_3:127336783-127340613:+|nuORF'] 56080 10214 LDLGAAKA True PC9_epitope_Rep2 757.43340375049 757.43230993586 44.624 2 -0.4423790444650917 0.12044984224988975 0.9438714419765777 ['ENSG00000099624|ENST00000215375|ATP5F1D', 'ENST00000590265.5_1_19:1242319-1244433:+|nuORF'] 56595 11913 LDWRRRKP True PC9_epitope_Rep5 1125.65194456817 1125.6508499358602 50.821 2 -0.44240816782063613 0.12044984224988975 0.9438714419765777 ['ENST00000545932.5_1_12:108956369-108956426:+|nuORF'] 100609 12692 SLQKQQKQQQE True H1975_Epitope_Rep1 1371.7106412127498 1371.7095499358602 53.876 2 -0.4425057059800998 0.1204606747290398 0.9438714419765777 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4'] 97100 14805 SFCHYYYF True H1975_Epitope_Rep2 1128.43750315476 1128.4364099358602 62.105 2 -0.4425486486713188 0.1204606747290398 0.9438714419765777 ['ENSG00000175893|ENST00000380916|ZDHHC21', 'ZDHHC21|p.V172Ffs*8|1|0.18|ENSG00000175893|chr9:14640003-14640003|C/-|frameshift_variant'] 15137 7365 EAELNKHWRR True NCI_RA007_Epitope_Rep2 1337.6952659321298 1337.6941699358601 33.272 2 -0.4425920757098712 0.1204606747290398 0.9438714419765777 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 108481 6698 TEETATTVVA True H1975_Epitope_Rep3 1020.4975201286799 1020.49642993586 30.718 2 -0.4426370822102064 0.12049255402150684 0.9438714419765777 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 44064 12496 ILLKHIDLP True PC9_epitope_Rep3 1060.66446631448 1060.6633699358601 53.092 2 -0.44268805121659505 0.12052238805970149 0.9438714419765777 ['ENST00000309050.9_2_12:110479455-110479527:-|nuORF'] 62251 2850 LLQEDIRRHRN True H1975_Epitope_Rep1 1448.7960426025597 1448.7943949037901 14.583 3 -0.4427320433451928 0.12052238805970149 0.9438714419765777 ['ENST00000511797.5_1_4:2869713-2869782:+|nuORF'] 53233 6101 KTEEGVNLGQA True H1975_Epitope_Rep2 1144.5724164044398 1144.5713099358602 28.444 2 -0.44277655410327793 0.12055222007394593 0.9438714419765777 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 53025 12845 KRRSYYSYSYY True H1975_Epitope_Rep1 1534.72047762046 1534.7193899358601 54.477 2 -0.44282893556591235 0.12055222007394593 0.9438714419765777 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF'] 95513 6351 SAPTPAPAA True PC9_epitope_Rep5 781.39701824177 781.39592993586 29.405 2 -0.4430130626758675 0.12058409511049302 0.9438714419765777 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 115496 6191 TVGEQNSW True NCI_RA007_Epitope_Rep4 919.4035601741899 919.40246993586 30.423 2 -0.4430228049764236 0.12059491910592544 0.9438714419765777 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF', 'nc|ENSG00000163913|Q9HBG6-11|IFT122', 'nc|ENSG00000163913|Q9HBG6-3|IFT122', 'nc|ENSG00000163913|Q9HBG6-6|IFT122', 'ENSG00000163913|ENST00000348417|IFT122', 'nc|ENSG00000163913|Q9HBG6-5|IFT122', 'nc|ENSG00000163913|Q9HBG6-7|IFT122', 'nc|ENSG00000163913|Q9HBG6-10|IFT122', 'nc|ENSG00000163913|Q9HBG6-8|IFT122', 'nc|ENSG00000163913|Q9HBG6-9|IFT122', 'nc|ENSG00000163913|Q9HBG6-4|IFT122'] 95296 11692 SAELASFL True NCI_RA007_Epitope_Rep3 836.42798401688 836.42688993586 53.105 2 -0.4430536875295595 0.12059491910592544 0.9438714419765777 ['ENSG00000169299|ENST00000381967|PGM2'] 96524 14726 SELLCYFIII True PC9_epitope_Rep6 1212.6464332918401 1212.6453299358602 68.592 2 -0.4430882043516713 0.12059491910592544 0.9438714419765777 ['ENSG00000103335|ENST00000301015|PIEZO1'] 139007 9179 YSGKEGDKFK True NCI_RA007_Epitope_Rep2 1157.57168812845 1157.5705899358602 40.313 2 -0.443147296089469 0.12060983261824411 0.9438714419765777 ['ENST00000468373.1_1_1:153516388-153518231:-|nuORF', 'ENSG00000196154|ENST00000368716|S100A4'] 100879 5714 SLSGSDVVSA True H1975_Epitope_Rep3 920.445090633 920.44454496793 27.007 1 -0.44319854248698626 0.12062474562474562 0.9438714419765777 ['ENST00000505457.1_1_5:6749703-6750667:+|nuORF'] 140763 6887 YYRERSRERER True NCI_RA007_Epitope_Rep2 1598.80258453498 1598.80093490379 31.406 3 -0.44328958497941506 0.12070749037629941 0.9438714419765777 ['nc|ENSG00000111605|Q16630-3|CPSF6', 'ENSG00000111605|ENST00000435070|CPSF6', 'nc|ENSG00000111605|Q16630-2|CPSF6'] 128303 17514 VSCEVIDWV True PC9_epitope_Rep4 1048.4899326504399 1048.4888299358602 75.371 2 -0.4433036522101251 0.12071421304303591 0.9438714419765777 ['ENSG00000172497|ENST00000307624|ACOT12'] 126845 18614 VPTAVFGV True PC9_epitope_Rep6 788.4432401582 788.44214993586 84.241 2 -0.44330781737840275 0.12071421304303591 0.9438714419765777 ['ENSG00000173080|ENST00000368318|RXFP4'] 114525 5081 TSGQQKPHP True NCI_RA007_Epitope_Rep5 978.4882928576599 978.48718993586 26.244 2 -0.44330856640773 0.12071421304303591 0.9438714419765777 ['ENSG00000149346|ENST00000334534|SLX4IP'] 10593 23510 CRRWRYWEYW True PC9_epitope_Rep1 1602.7302715418598 1602.72916993586 95.218 2 -0.44331720696467247 0.12071421304303591 0.9438714419765777 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 36106 23300 GVEKFLEL True PC9_epitope_Rep3 933.5171333744498 933.51602993586 94.904 2 -0.44331741871378716 0.12071421304303591 0.9438714419765777 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 98660 8700 SIPTNEKADP True H1975_Epitope_Rep2 1070.52440358286 1070.5233099358602 38.427 2 -0.44340437687854756 0.12076303518440017 0.9438714419765777 ['SYNPO2|p.I1101Ffs*22|2|0.25|ENSG00000172403|chr4:119057443-119057443|C/-|frameshift_variant', 'nc|ENSG00000172403|Q9UMS6-4|SYNPO2', 'ENSG00000172403|ENST00000307142|SYNPO2', 'MSI2-SYNPO2|1|fusion', 'MSI2-SYNPO2|4|fusion', 'nc|ENSG00000172403|Q9UMS6|SYNPO2', 'nc|ENSG00000172403|Q9UMS6-3|SYNPO2', 'MSI2-SYNPO2|2|fusion', 'MSI2-SYNPO2|5|fusion', 'MSI2-SYNPO2|3|fusion', 'MSI2-SYNPO2|6|fusion'] 77482 21363 NYPPQYLILKL True PC9_epitope_Rep3 1360.77547331544 1360.77436993586 87.47 2 -0.44342476513572565 0.1207697524584605 0.9438714419765777 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 119089 7953 VEHSREYKQER True H1975_Epitope_Rep3 1459.71678922235 1459.7156899358602 35.56 2 -0.44343285805677757 0.1207697524584605 0.9438714419765777 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.W3587Cfs*14|1|0.26|ENSG00000198626|chr1:237727121-237727121|G/-|frameshift_variant', 'RYR2|p.P2526Hfs*3|1|0.2|ENSG00000198626|chr1:237649940-237649940|C/-|frameshift_variant', 'RYR2|p.E1269Kfs*3|2|0.16|ENSG00000198626|chr1:237589997-237589998|-/AA|frameshift_variant', 'RYR2|p.R1482Pfs*13|1|0.23|ENSG00000198626|chr1:237595506-237595506|G/-|frameshift_variant', 'RYR2|p.R1585Afs*29|1|0.24|ENSG00000198626|chr1:237610823-237610824|-/C|frameshift_variant'] 77746 5597 PAAPPLLP True NCI_RA007_Epitope_Rep1 774.46397560278 774.46286993586 25.835 2 -0.4434421030355945 0.1207697524584605 0.9438714419765777 ['ENST00000521334.5_3_14:91526698-91626657:+|nuORF'] 59770 9684 LGYRKYRRQR True NCI_RA007_Epitope_Rep4 1394.8007340601798 1394.7996299358601 44.099 2 -0.4434843307552999 0.1207697524584605 0.9438714419765777 ['nc|ENSG00000186448|O14709-2|ZNF197'] 63325 16076 LPDPVLGA True PC9_epitope_Rep4 780.4381547777599 780.43704993586 69.771 2 -0.4434864469335066 0.1207697524584605 0.9438714419765777 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 100573 14041 SLQDGQSPGVY True H1975_Epitope_Rep2 1149.5302172392899 1149.52912993586 59.16 2 -0.4436303075460743 0.1207954699579547 0.9438714419765777 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'ENSG00000162849|ENST00000407071|KIF26B'] 120874 7252 VGDVFRGG True NCI_RA007_Epitope_Rep4 805.4082516318099 805.40714993586 34.53 2 -0.44366865293807417 0.1207954699579547 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 22516 9287 ETKSITLFP True H1975_Epitope_Rep2 1034.5648118428599 1034.56370993586 40.68 2 -0.44367609469335945 0.1207954699579547 0.9438714419765777 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.W3587Cfs*14|1|0.26|ENSG00000198626|chr1:237727121-237727121|G/-|frameshift_variant', 'RYR2|p.P2526Hfs*3|1|0.2|ENSG00000198626|chr1:237649940-237649940|C/-|frameshift_variant', 'RYR2|p.T1730M|2|0.22|ENSG00000198626|chr1:237614317-237614317|C/T|missense_variant'] 20353 19247 EPGSAFLQL True PC9_epitope_Rep5 960.4916469026 960.49109496793 79.072 1 -0.4436926781928824 0.1207954699579547 0.9438714419765777 ['ENSG00000161509|ENST00000293190|GRIN2C'] 104621 10901 SSVLWLDVHN True H1975_Epitope_Rep1 1168.58767254576 1168.58656993586 46.892 2 -0.44376146907523006 0.12080627934968723 0.9438714419765777 ['ENSG00000118162|ENST00000338134|KPTN'] 100333 8533 SLMKKRRNWHR True H1975_Epitope_Rep1 1510.84155332634 1510.83991490379 37.75 3 -0.443780187765509 0.12080627934968723 0.9438714419765777 ['ENSG00000006459|ENST00000397560|KDM7A', 'nc|ENSG00000006459|Q6ZMT4-2|KDM7A'] 138205 23583 YQRWREERFRQ True PC9_epitope_Rep1 1652.8284053599998 1652.82730993586 95.5 2 -0.44388899362322237 0.12080627934968723 0.9438714419765777 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 115888 23069 TVPDLLLPLV True PC9_epitope_Rep4 1078.66379760814 1078.6627099358602 96.958 2 -0.44391316069231235 0.12083813657014986 0.9438714419765777 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'ENST00000535958.1_1_12:6443054-6450989:-|nuORF', 'ENST00000538363.1_1_12:6443236-6450989:-|nuORF', 'nc|ENSG00000067182|P19438-5|TNFRSF1A', 'nc|ENSG00000067182|P19438-4|TNFRSF1A'] 23433 20341 EVVVRQKRAP True PC9_epitope_Rep1 1180.7040397106798 1180.70294993586 83.072 2 -0.4439614342651737 0.12088489574504153 0.9438714419765777 ['ENSG00000260734|ENST00000561754|TLE7'] 42708 17495 IEYFTSQGL True PC9_epitope_Rep2 1056.51277627 1056.51166993586 72.55 2 -0.44396412478120334 0.12088489574504153 0.9438714419765777 ['nc|ENSG00000078900|O15350-11|TP73', 'nc|ENSG00000078900|O15350-8|TP73', 'ENSG00000078900|ENST00000378295|TP73', 'nc|ENSG00000078900|O15350-6|TP73'] 99206 7714 SLAVCEESPP True H1975_Epitope_Rep3 1030.4641118254199 1030.46300993586 34.655 2 -0.44414807480600454 0.1209845569663169 0.9438714419765777 ['nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1'] 133151 11726 WDANDMVI True PC9_epitope_Rep6 962.41676771018 962.41566993586 56.252 2 -0.4442893545586026 0.12099535545987727 0.9438714419765777 ['nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 55723 15930 LDDNPQGEVT True PC9_epitope_Rep3 1086.4829326937 1086.48182993586 66.421 2 -0.4443253759072402 0.12099535545987727 0.9438714419765777 ['nc|ENSG00000062598|Q96JJ3-3|ELMO2', 'ENSG00000062598|ENST00000290246|ELMO2'] 4652 11602 ALCGTERQELF True PC9_epitope_Rep6 1265.6074220141702 1265.60578490379 55.745 3 -0.444406979049416 0.12099535545987727 0.9438714419765777 ['ENST00000495183.5_1_6:29910749-29913287:+|nuORF'] 9024 18490 AVIGDVIRV True PC9_epitope_Rep1 940.57056592964 940.56946993586 75.912 2 -0.4444590341438596 0.12101025510636494 0.9438714419765777 ['nc|ENSG00000165732|Q9NR30-2|DDX21', 'ENSG00000165732|ENST00000354185|DDX21'] 95412 7996 SAKHIHLVL True NCI_RA007_Epitope_Rep4 1016.61309944796 1016.61200993586 37.523 2 -0.4444911886905275 0.12102105156106986 0.9438714419765777 ['ENST00000552245.5_1_12:99225710-99548222:-|nuORF'] 71308 7102 MHDGNVITA True PC9_epitope_Rep3 956.43856578392 956.43746993586 32.326 2 -0.44452480530381894 0.12102105156106986 0.9438714419765777 ['ENST00000553691.5_1_14:77907431-77919723:-|nuORF', 'VIPAS39|p.H309Ifs*2|1|0.36|ENSG00000151445|chr14:77435381-77435381|G/-|frameshift_variant', 'ENSG00000151445|ENST00000557658|VIPAS39', 'ENST00000555854.1_1_14:77906782-77910618:-|nuORF', 'nc|ENSG00000151445|Q9H9C1-2|VIPAS39'] 66224 17183 LSPSLWPLMP True PC9_epitope_Rep3 1139.6049028330299 1139.60380993586 71.251 2 -0.44453764205606117 0.12102105156106986 0.9438714419765777 ['ENST00000450269.5_1_1:45274176-45274422:+|nuORF'] 127171 7510 VQEWQNAIH True PC9_epitope_Rep1 1123.5410567065098 1123.53940490379 33.706 3 -0.44480702917761433 0.12112069696096545 0.9438714419765777 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'ENST00000523028.5_1_16:21892164-21910369:-|nuORF', 'ENST00000309865.11_1_16:22482951-22501641:+|nuORF', 'ENST00000565246.6_2_16:70260671-70260800:-|nuORF', 'ENST00000566127.1_1_16:29540393-29548932:-|nuORF', 'ENST00000529428.5_1_16:30280378-30291878:-|nuORF'] 3286 7799 AGGGGAFTVDP True H1975_Epitope_Rep2 947.4348603024699 947.43376993586 34.946 2 -0.4448264349013383 0.12112738119449529 0.9438714419765777 ['ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant'] 35115 21281 GRRWHRRPRRP True PC9_epitope_Rep6 1528.8824470518798 1528.8808049037902 94.71 3 -0.444831815239873 0.12112738119449529 0.9438714419765777 ['ENST00000527920.5_1_11:65339976-65340141:+|nuORF'] 101770 19609 SPHRILLGRA True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 80.462 2 -0.4448493015815357 0.12112738119449529 0.9438714419765777 ['ENST00000560415.1_2_15:40617466-40617688:+|nuORF'] 27173 19940 FLSIFFFFFFF True PC9_epitope_Rep5 1507.7580323461495 1507.7569299358602 81.754 2 -0.44486978307279246 0.12112738119449529 0.9438714419765777 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|119|2|anti-sense'] 128972 5692 VSVRWEKNR True NCI_RA007_Epitope_Rep4 1172.64143945412 1172.63980490379 28.507 3 -0.44489166348150855 0.12112738119449529 0.9438714419765777 ['ENSG00000130702|ENST00000252999|LAMA5', 'ENST00000370691.6_1_20:60885298-60889553:-|nuORF'] 45689 7518 ISLERQVL True PC9_epitope_Rep2 956.5654805491998 956.56438993586 34.285 2 -0.4449719596280511 0.12117411788631664 0.9438714419765777 ['nc|ENSG00000117543|Q9H2P9-4|DPH5'] 81410 14388 PPYEQVVK True H1975_Epitope_Rep3 958.5123823471798 958.5118349679301 60.694 1 -0.44497665565219985 0.12117411788631664 0.9438714419765777 ['nc|ENSG00000154978|Q96AW1-4|VOPP1', 'nc|ENSG00000154978|Q96AW1-2|VOPP1', 'nc|ENSG00000154978|Q96AW1-3|VOPP1', 'ENSG00000154978|ENST00000285279|VOPP1'] 111498 15476 TLLLQHTDP True PC9_epitope_Rep2 1036.5553097883198 1036.5542099358602 64.805 2 -0.44500433464796657 0.12118901147321504 0.9438714419765777 ['ENST00000579053.5_1_18:691132-706776:-|nuORF'] 57708 5593 LENGEIETIAR True NCI_RA007_Epitope_Rep2 1243.64083031743 1243.63918490379 26.37 3 -0.4450220766802495 0.12120390455531453 0.9438714419765777 ['nc|ENSG00000101474|Q9HDC9-2|APMAP', 'ENSG00000101474|ENST00000217456|APMAP'] 129531 14383 VTFVDLVP True PC9_epitope_Rep2 888.4956696538799 888.49456993586 60.586 2 -0.4450324291432831 0.12121058071950248 0.9438714419765777 ['ZW10|p.A572V|1|0.04|ENSG00000086827|chr11:113739251-113739251|G/A|missense_variant'] 139894 19836 YVEEEMPQI True PC9_epitope_Rep1 1136.5059766373997 1136.5048699358601 81.115 2 -0.4450571794366805 0.12121058071950248 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2'] 34263 10412 GPLEHPLHDP True H1975_Epitope_Rep2 1110.5458077337798 1110.54470993586 45.064 2 -0.4450741259043197 0.12121058071950248 0.9438714419765777 ['ENST00000337478.2_1_10:106075471-106098072:-|nuORF'] 107576 4679 TAENFWLDP True H1975_Epitope_Rep2 1091.4923751785898 1091.4912699358601 23.094 2 -0.44509342724730766 0.12121058071950248 0.9438714419765777 ['nc|ENSG00000171984|Q8IYI0-2|SHLD1', 'ENSG00000171984|ENST00000303142|SHLD1'] 5721 5862 APASVPAQA True PC9_epitope_Rep4 810.4235673427798 810.42246993586 29.424 2 -0.44509673246261466 0.12121058071950248 0.9438714419765777 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 55064 17160 LALGYHFL True PC9_epitope_Rep5 932.5119884243601 932.51088993586 71.027 2 -0.4451427396770983 0.12122547192191684 0.9438714419765777 ['UVSSA|p.V676Sfs*10|1|0.52|ENSG00000163945|chr4:1383926-1383926|A/-|frameshift_variant', 'ENSG00000163945|ENST00000389851|UVSSA'] 54765 15961 LAEREVASL True PC9_epitope_Rep3 986.5396597241798 986.53856993586 66.54 2 -0.44519005190740485 0.12124036261967297 0.9438714419765777 ['ENST00000335020.2_1_6:116360191-116360374:+|nuORF'] 61266 20584 LLDSLPNLV True PC9_epitope_Rep2 982.5698972233 982.56880993586 84.609 2 -0.4455171878988523 0.12144164294428629 0.9438714419765777 ['ENST00000515035.5_1_5:149754748-149755505:+|nuORF'] 33853 18948 GLVLSLEEQL True PC9_epitope_Rep3 1099.61249031127 1099.6119749679299 78.108 1 -0.44561514898086413 0.12152018841390061 0.9438714419765777 ['ENSG00000116830|ENST00000369466|TTF2'] 62095 7265 LLNKSGPV True NCI_RA007_Epitope_Rep5 826.4912529797799 826.49014993586 34.62 2 -0.4456313942186887 0.12152018841390061 0.9438714419765777 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF'] 44925 2653 IQEEKENTEQR True NCI_RA007_Epitope_Rep5 1402.6688359704199 1402.66720490379 14.894 3 -0.44563330222379094 0.12152018841390061 0.9438714419765777 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'ENST00000526262.5_1_11:70189825-70228249:+|nuORF', 'ENST00000532504.5_1_11:70185286-70228249:+|nuORF'] 84435 8515 QGIKHPLP True NCI_RA007_Epitope_Rep3 888.5181364339599 888.51702993586 40.566 2 -0.44578622244950067 0.12156895967468655 0.9438714419765777 ['ENST00000474626.5_1_6:33239896-33243984:+|nuORF'] 58529 6274 LFASEGQPGKP True H1975_Epitope_Rep3 1129.57677350889 1129.57566993586 29.14 2 -0.44581204012039277 0.12158384303891835 0.9438714419765777 ['nc|nan|Q9H0W9-3|C11orf54'] 78537 20671 PDLSPLKLTI True PC9_epitope_Rep4 1095.65396120043 1095.65286993586 87.669 2 -0.4459328825552916 0.12159048554874123 0.9438714419765777 ['ENST00000551270.1_1_12:104283206-104309165:-|nuORF', 'ENST00000548520.1_1_12:104283206-104286955:-|nuORF', 'nc|ENSG00000214198|Q6P2S7|TTC41P', 'nc|ENSG00000214198|Q6P2S7-2|TTC41P'] 53181 5301 KSTVLSSVP True H1975_Epitope_Rep2 916.5229470308799 916.52184993586 25.446 2 -0.4459756402867818 0.12159048554874123 0.9438714419765777 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant'] 17977 13370 EIGLLKQLNHP True PC9_epitope_Rep2 1260.7190210684798 1260.7179299358602 56.705 2 -0.4459836985362606 0.12159048554874123 0.9438714419765777 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6'] 104892 21838 STFHDQIAML True PC9_epitope_Rep2 1161.5488445088897 1161.54774993586 89.475 2 -0.4459958703272368 0.12159048554874123 0.9438714419765777 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 68673 10770 LVCFLLLP True PC9_epitope_Rep3 916.5455970517598 916.54448993586 46.383 2 -0.44600649205627063 0.12159048554874123 0.9438714419765777 ['ENSG00000131183|ENST00000324417|SLC34A1'] 66184 19985 LSPKTTISV True PC9_epitope_Rep1 944.55424715916 944.55314993586 81.697 2 -0.4460342735061051 0.12162230843512291 0.9438714419765777 ['ENST00000474985.5_1_2:33809845-33813599:-|nuORF', 'ENSG00000119812|ENST00000238823|FAM98A'] 128271 4813 VSALLHSST True NCI_RA007_Epitope_Rep4 913.4868958753301 913.48578993586 24.948 2 -0.44610208920082134 0.12162688665661579 0.9438714419765777 ['ENSG00000198786|ENST00000361567|MT-ND5'] 116479 14261 TYDETYQRYRP True PC9_epitope_Rep2 1490.6790067313 1490.67790993586 60.12 2 -0.44611303460183394 0.12162688665661579 0.9438714419765777 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 15841 10070 EDLELYVSRNN True NCI_RA007_Epitope_Rep1 1350.6415585934199 1350.6404699358602 43.18 2 -0.4461226260120027 0.12162688665661579 0.9438714419765777 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant'] 65272 16740 LSEHQQYVI True PC9_epitope_Rep1 1115.5611234447501 1115.56002993586 69.219 2 -0.44612737200683245 0.12162688665661579 0.9438714419765777 ['ENSG00000164850|ENST00000397088|GPER1'] 46912 11208 IVKKEEKGDYY True H1975_Epitope_Rep1 1370.7081816012599 1370.70708993586 48.082 2 -0.4461288239316836 0.12162688665661579 0.9438714419765777 ['ENSG00000155761|ENST00000336338|SPAG17'] 20406 10599 EPLVLDGK True PC9_epitope_Rep3 869.4858332461699 869.48472993586 45.716 2 -0.44617492169155 0.12162688665661579 0.9438714419765777 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2'] 116461 17474 TYAGLHVLL True PC9_epitope_Rep3 985.55966689277 985.55856993586 72.392 2 -0.44624639532589716 0.1216417657621032 0.9438714419765777 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5', 'nc|ENSG00000290203|Q96PH1-5|NOX5', 'ENST00000527315.5_1_15:69323805-69349033:+|nuORF'] 2935 19545 AFFSAGFLIV True PC9_epitope_Rep3 1070.5800679841798 1070.5789699358602 80.412 2 -0.44632534799132245 0.12165664436351317 0.9438714419765777 ['ENSG00000113946|ENST00000264734|CLDN16'] 57745 10526 LENQGLEAVQ True H1975_Epitope_Rep3 1099.5509526838698 1099.54984993586 45.554 2 -0.44641635071087576 0.12167152246087133 0.9438714419765777 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 117534 14903 VAFSPVTEL True H1975_Epitope_Rep3 961.51204799401 961.51149496793 62.712 1 -0.4464585060060075 0.12172027711435202 0.9438714419765777 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45745049-45746742:+|nuORF', 'ENST00000474114.5_1_21:45745300-45746742:+|nuORF'] 82792 5419 PVRTCAER True NCI_RA007_Epitope_Rep5 930.4705346185399 930.46942993586 27.533 2 -0.44651136931958796 0.12172896800528446 0.9438714419765777 ['ENST00000522017.5_1_X:46382546-46401540:-|nuORF'] 83584 15931 QDSVTLSTI True PC9_epitope_Rep3 962.4920408254201 962.4914949679301 66.425 1 -0.4465265570958557 0.12172896800528446 0.9438714419765777 ['ENST00000238112.7_1_2:9574072-9576421:+|nuORF'] 126266 9823 VPHLLTEA True PC9_epitope_Rep2 878.48616759934 878.48506993586 43.119 2 -0.446547349371629 0.12172896800528446 0.9438714419765777 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 99616 16498 SLFQCYNV True PC9_epitope_Rep5 972.43750315476 972.43640993586 68.458 2 -0.4465509326059197 0.12172896800528446 0.9438714419765777 ['ENSG00000146247|ENST00000275034|PHIP'] 15141 8608 EAEPCPELHTE True H1975_Epitope_Rep1 1253.52341760669 1253.5223299358602 38.038 2 -0.4465841009024772 0.12174384336573964 0.9438714419765777 ['nc|ENSG00000105875|A4D1P6-2|WDR91', 'ENSG00000105875|ENST00000354475|WDR91'] 5254 10651 ALQRWQDEL True PC9_epitope_Rep5 1157.5829215184897 1157.58127490379 45.956 3 -0.4466278015748698 0.12175871822231255 0.9438714419765777 ['ENSG00000152455|ENST00000354919|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-2|SUV39H2'] 59403 11377 LGLREHTL True PC9_epitope_Rep4 937.5345147740901 937.53340993586 51.535 2 -0.44664892819482693 0.12177153018883902 0.9438714419765777 ['ENST00000354485.5_1_9:732324-732786:+|nuORF'] 5608 5293 APAAGMNAA True PC9_epitope_Rep3 772.3537735307999 772.35266993586 25.437 2 -0.44670003152811516 0.12177153018883902 0.9438714419765777 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP', 'nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF', 'ENST00000474114.5_1_21:45741509-45744801:+|nuORF', 'ENST00000498841.5_1_21:45739892-45744801:+|nuORF', 'ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000460521.5_1_21:45741509-45746742:+|nuORF', 'ENST00000467315.5_1_21:45739892-45746742:+|nuORF', 'ENST00000466134.5_1_21:45739892-45745863:+|nuORF'] 103382 13322 SQVSLYEY True H1975_Epitope_Rep1 987.4549270407099 987.4543749679301 56.348 1 -0.44674859047321636 0.12180333976899367 0.9438714419765777 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 44291 8236 ILWHQLFP True NCI_RA007_Epitope_Rep1 1052.58073669052 1052.57962993586 36.034 2 -0.4467570698992966 0.12181821261029349 0.9438714419765777 ['ENST00000463255.1_1_3:152175682-152175850:-|nuORF'] 131352 20949 VVSAATQECLI True PC9_epitope_Rep3 1132.5798102840001 1132.5787099358602 85.858 2 -0.4467980917166678 0.12182895850973752 0.9438714419765777 ['ENST00000421407.1_1:144598537-144606923:+|nuORF'] 65699 9688 LSHLHQTV True PC9_epitope_Rep5 933.50321464581 933.50210993586 42.232 2 -0.4468000419350294 0.12182895850973752 0.9438714419765777 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'nc|ENSG00000198198|Q5T011-7|SZT2'] 46291 8977 ITEKTEDSSV True NCI_RA007_Epitope_Rep4 1107.52954853295 1107.5284499358602 41.365 2 -0.4468004462730349 0.12182895850973752 0.9438714419765777 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'SMARCAD1|p.N347Kfs*4|1|0.46|ENSG00000163104|chr4:94252758-94252759|-/A|frameshift_variant'] 33559 18303 GLKIGDTV True PC9_epitope_Rep3 801.45961849833 801.45852993586 75.609 2 -0.44685854930430396 0.12186076442397249 0.9438714419765777 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 3366 9475 AGIEAQQVV True PC9_epitope_Rep1 913.48689587533 913.48578993586 41.303 2 -0.446938054699493 0.12192024384048768 0.9438714419765777 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 110071 10433 TIADTFQEQ True H1975_Epitope_Rep3 1051.48220441771 1051.48110993586 45.19 2 -0.4469758286122327 0.12192024384048768 0.9438714419765777 ['ENSG00000132950|ENST00000337963|ZMYM5', 'nc|ENSG00000132950|Q9UJ78-5|ZMYM5', 'ENST00000382909.5_1_13:20398619-20425669:-|nuORF'] 19985 6614 EMERDALLAH True H1975_Epitope_Rep2 1183.56555720219 1183.56444993586 30.349 2 -0.4469925325657897 0.12192024384048768 0.9438714419765777 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 44146 19422 ILPLLGHGV True PC9_epitope_Rep5 917.5698376536499 917.56874993586 79.755 2 -0.44703038564921416 0.12192024384048768 0.9438714419765777 ['ENSG00000084463|ENST00000261167|WBP11'] 55410 15389 LATAVTGAALI True PC9_epitope_Rep5 999.5964463243099 999.59534993586 64.201 2 -0.4470839753245194 0.12192066098911332 0.9438714419765777 ['ENSG00000188760|ENST00000373883|TMEM198'] 115037 6443 TTPDTSLGST True PC9_epitope_Rep5 978.4505699362601 978.44946993586 29.756 2 -0.4471082652987927 0.12192066098911332 0.9438714419765777 ['ZNF827|p.S66T|1|0.31|ENSG00000151612|chr4:145903063-145903063|A/T|missense_variant'] 22552 7664 ETLQTVTIY True H1975_Epitope_Rep3 1066.55464108198 1066.55354993586 34.461 2 -0.44717203535912703 0.12192066098911332 0.9438714419765777 ['ENSG00000090339|ENST00000264832|ICAM1'] 4503 9614 AKKRVIVKKLP True NCI_RA007_Epitope_Rep5 1278.8863611770998 1278.8847149037902 43.623 3 -0.4471837024124969 0.12192066098911332 0.9438714419765777 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 135861 9210 YERAEWRENIR True H1975_Epitope_Rep1 1520.7484237037995 1520.74678490379 40.335 3 -0.44718981349003867 0.12192066098911332 0.9438714419765777 ['nc|ENSG00000186716|P11274-2|BCR', 'ENSG00000186716|ENST00000305877|BCR', 'ENST00000487968.5_1_22:23626151-23631864:+|nuORF'] 115024 19914 TTLYIQQLK True PC9_epitope_Rep4 1106.6335601090198 1106.6324699358602 84.735 2 -0.44720834440713186 0.12192066098911332 0.9438714419765777 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1-MLLT3|1|fusion', 'NBEAL1|p.R1792Gfs*10|1|0.22|ENSG00000144426|chr2:203149143-203149143|T/-|frameshift_variant', 'ENST00000478884.5_1_2:203881095-203927086:+|nuORF'] 119375 18085 VENQKELL True PC9_epitope_Rep1 971.5287606873098 971.52766993586 74.358 2 -0.447222924529378 0.12192066098911332 0.9438714419765777 ['CENPE|p.K2204N|1|0.14|ENSG00000138778|chr4:103133803-103133803|C/G|missense_variant'] 72223 13840 MRWRWWQRLLP True H1975_Epitope_Rep1 1626.8717908254598 1626.8706899358601 58.381 2 -0.4472521485386667 0.12192066098911332 0.9438714419765777 ['ENSG00000176410|ENST00000395176|DNAJC30'] 82669 9529 PVMAIRNKMI True PC9_epitope_Rep5 1171.65695548923 1171.65529490379 41.612 3 -0.44729192774621984 0.12195245835026412 0.9438714419765777 ['ENSG00000120860|ENST00000240079|WASHC3', 'ENST00000541569.5_1_12:102419750-102455740:-|nuORF'] 45606 9622 ISGTGSNLQAL True PC9_epitope_Rep1 1059.55603806431 1059.5549499358601 41.866 2 -0.44740070060599707 0.12198012426566442 0.9438714419765777 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 82294 19831 PTPLLRPSRR True PC9_epitope_Rep3 1191.72002412799 1191.71836490379 81.515 3 -0.44740942104740994 0.12198012426566442 0.9438714419765777 ['ENSG00000196313|ENST00000434423|POM121'] 45833 12753 ISPVFSQTSV True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 56.915 2 -0.44741777383203307 0.12198012426566442 0.9438714419765777 ['ENST00000605834.1_1_4:185396718-185397009:+|nuORF'] 139937 4749 YVHKDGLNS True NCI_RA007_Epitope_Rep2 1031.5036085686297 1031.5025099358602 23.103 2 -0.44745313065750986 0.1220288481072662 0.9438714419765777 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2'] 51861 19424 KKMEKKKLLNW True NCI_RA007_Epitope_Rep5 1444.8588260999197 1444.85772993586 81.602 2 -0.4475815741398482 0.12204371159152855 0.9438714419765777 ['ENST00000269141.7_1_18:25531022-25531103:-|nuORF'] 59995 17246 LHQEVSVLV True PC9_epitope_Rep5 1022.5760452328999 1022.57494993586 71.352 2 -0.44761042951393876 0.1220503097809527 0.9438714419765777 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 85229 5372 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 25.515 3 -0.44768456536021434 0.1220503097809527 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 59408 12000 LGLRPLHQL True PC9_epitope_Rep2 1045.63964854897 1045.63854993586 51.475 2 -0.44769625360755255 0.1220503097809527 0.9438714419765777 ['ENST00000318430.9_1_17:76134666-76137438:+|nuORF'] 9962 13968 AYRRIHSL True PC9_epitope_Rep1 1014.5722972651399 1014.57120993586 58.566 2 -0.44771730154581174 0.1220503097809527 0.9438714419765777 ['ENST00000453705.1_3_X:154299864-154348422:+|nuORF', 'ENSG00000185515|ENST00000330045|BRCC3', 'nc|ENSG00000185515|P46736-3|BRCC3', 'nc|ENSG00000185515|P46736|BRCC3', 'nc|ENSG00000185515|P46736-4|BRCC3'] 17123 7846 EGSVLQAKL True PC9_epitope_Rep4 943.5338460677499 943.53274993586 37.593 2 -0.44771942764431777 0.1220503097809527 0.9438714419765777 ['ENSG00000013364|ENST00000357402|MVP'] 111018 13597 TLDLAPPTK True PC9_epitope_Rep2 954.53859709502 954.53750993586 57.59 2 -0.4478121397421998 0.12209489310560794 0.9438714419765777 ['ENSG00000164754|ENST00000297338|RAD21', 'ENST00000414579.2_1_X:100057007-100057235:+|nuORF', 'RAD21-EIF3H|4|fusion'] 413 10911 AALNVRDNVGE True H1975_Epitope_Rep3 1156.58364979448 1156.58254993586 47.056 2 -0.44781787611360946 0.12209489310560794 0.9438714419765777 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 63857 9012 LPTTNSGVSA True PC9_epitope_Rep1 945.47672511445 945.4761749679301 39.512 1 -0.447842117760197 0.12209489310560794 0.9438714419765777 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 136345 7846 YHCWHYFELLK True NCI_RA007_Epitope_Rep1 1537.7176411694898 1537.7159849037903 34.51 3 -0.4478674809336588 0.12210975320762382 0.9438714419765777 ['SOS2|p.P1259*|1|0.09|ENSG00000100485|chr14:50118556-50118569|GAGGAGTGCTTGGC/-|frameshift_variant', 'ENSG00000100485|ENST00000216373|SOS2'] 25306 13472 FEELC[Carbamidomethyl]SDLFR True H1975_Epitope_Rep3 1314.5914378762898 1314.59034993586 57.094 2 -0.44794150986339193 0.12212254570074475 0.9438714419765777 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 894 8195 ADLVPRRGYQE True H1975_Epitope_Rep3 1302.6680481247802 1302.6669499358602 36.502 2 -0.4479467874581949 0.12212254570074475 0.9438714419765777 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'nc|ENSG00000066827|Q9P243-3|ZFAT'] 35278 19478 GSPCWGLL True PC9_epitope_Rep1 831.3949100667899 831.39380993586 79.738 2 -0.4479808826990442 0.12213533732778173 0.9438714419765777 ['ENST00000483944.5_1_3:124810369-124811009:-|nuORF'] 12553 9386 DLDGIAPKVP True H1975_Epitope_Rep3 1023.5600608155898 1023.5589699358601 41.103 2 -0.44806791913299054 0.12213533732778173 0.9438714419765777 ['FRMPD1|p.E1003V|1|0.15|ENSG00000070601|chr9:37745040-37745040|A/T|missense_variant'] 36552 5614 GVLASRLRDP True H1975_Epitope_Rep2 1082.61964138038 1082.61854993586 26.597 2 -0.4480900240356591 0.12215019548770374 0.9438714419765777 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 57988 18566 LEQTNILC True PC9_epitope_Rep3 932.4637179025999 932.46262993586 76.637 2 -0.4481368686445795 0.12217577470509587 0.9438714419765777 ['ENST00000380773.8_2_6:2785591-2785759:+|nuORF'] 120078 6270 VFGLADGK True NCI_RA007_Epitope_Rep1 805.4334037504899 805.43230993586 28.42 2 -0.44815046854399687 0.12217577470509587 0.9438714419765777 ['IFT172|p.E132D|1|0.45|ENSG00000138002|chr2:27483878-27483878|T/A|missense_variant'] 100456 10418 SLPGCSDYAQV True PC9_epitope_Rep5 1138.49647458286 1138.49536993586 45.058 2 -0.4481846092047412 0.12217577470509587 0.9438714419765777 ['ENSG00000187033|ENST00000335556|SAMD7'] 121209 14417 VGGPEIEVG True PC9_epitope_Rep2 855.4337976733099 855.43270993586 60.724 2 -0.4482143075115008 0.12217577470509587 0.9438714419765777 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 42774 13865 IFHCVFLY True H1975_Epitope_Rep2 1040.51535955264 1040.51426993586 58.477 2 -0.44825132801199247 0.1222054866387991 0.9438714419765777 ['ENST00000268182.9_1_15:91043867-91044059:+|nuORF'] 19470 5833 ELQEGPEKP True NCI_RA007_Epitope_Rep1 1025.5029398622898 1025.50184993586 26.742 2 -0.44826725553847296 0.1222054866387991 0.9438714419765777 ['ENST00000524001.1_1_8:21768344-21770030:-|nuORF', 'ENSG00000147443|ENST00000276420|DOK2'] 34172 22744 GPFYRRHTQYM True PC9_epitope_Rep3 1454.6877380235399 1454.68664993586 92.751 2 -0.4483390323734711 0.12223519656123606 0.9438714419765777 ['LDB2|p.P23Q|1|0.17|ENSG00000169744|chr4:16898418-16898418|G/T|missense_variant'] 21262 9634 ERIKQQIAL True PC9_epitope_Rep5 1097.65569253593 1097.65458993586 42.021 2 -0.44834069949659366 0.12223519656123606 0.9438714419765777 ['ENSG00000144224|ENST00000272638|UBXN4'] 119706 19358 VETDQRKM True PC9_epitope_Rep4 1005.4913296327699 1005.49022993586 82.571 2 -0.4483547377458745 0.12225005076829351 0.9438714419765777 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 100385 19278 SLNNGLVPV True PC9_epitope_Rep1 911.5076313199099 911.50652993586 78.955 2 -0.4483769615593889 0.12228012588406484 0.9438714419765777 ['ENSG00000188011|ENST00000343216|RTP5', 'ENST00000419912.1_1_2:242813297-242815423:+|nuORF'] 12307 11564 DITERLILPR True H1975_Epitope_Rep1 1224.7190210684798 1224.7179299358602 49.467 2 -0.44839007407572284 0.12228012588406484 0.9438714419765777 ['ENSG00000154845|ENST00000400556|PPP4R1', 'PPP4R1|p.Y898Ffs*24|1|0.26|ENSG00000154845|chr18:9547948-9547949|AT/-|frameshift_variant', 'nc|ENSG00000154845|Q8TF05-2|PPP4R1', 'PPP4R1|p.R256Dfs*44|1|0.35|ENSG00000154845|chr18:9583270-9583270|G/-|frameshift_variant', 'PPP4R1|p.S412Qfs*37|2|0.3|ENSG00000154845|chr18:9570496-9570496|A/-|frameshift_variant', 'PPP4R1|p.L621Tfs*25|1|0.24|ENSG00000154845|chr18:9559559-9559586|CAGTCATAGATAAATACTGATCTAACAA/-|frameshift_variant', 'ENST00000285124.12_1_18:9562972-9595043:-|nuORF'] 338 14653 AAIRTDSLDV True PC9_epitope_Rep1 1059.5560380643099 1059.5549499358601 61.185 2 -0.44842690355618 0.12228012588406484 0.9438714419765777 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G'] 41300 17885 IAHEIYQKILS True PC9_epitope_Rep3 1313.7343367794501 1313.73268490379 73.996 3 -0.44849587381476763 0.12228012588406484 0.9438714419765777 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 16751 5803 EEYLERDFEYK True NCI_RA007_Epitope_Rep2 1519.68308905223 1519.68145490379 27.191 3 -0.4485075680327878 0.12228012588406484 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant', 'nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'DMD|p.L1312Ffs*8|1|0.52|ENSG00000198947|chrX:32438376-32438377|-/A|frameshift_variant'] 41323 10372 IAKGNNVL True PC9_epitope_Rep4 827.4865019525099 827.48540993586 47.595 2 -0.44854093933914474 0.12228012588406484 0.9438714419765777 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant', 'NEB|p.L1303F|1|0.27|ENSG00000183091|chr2:151674555-151674555|T/A|missense_variant'] 58830 14920 LFRGQISETL True PC9_epitope_Rep4 1162.6346227381798 1162.63352993586 65.33 2 -0.448568206618861 0.12228012588406484 0.9438714419765777 ['nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 1377 4439 AEEESCREDVT True H1975_Epitope_Rep3 1266.5034104381 1266.50176490379 22.197 3 -0.4485756608512883 0.12228012588406484 0.9438714419765777 ['ENSG00000090863|ENST00000422840|GLG1', 'nc|ENSG00000090863|Q92896-3|GLG1', 'nc|ENSG00000090863|Q92896-2|GLG1'] 45865 14100 ISQKLITGL True PC9_epitope_Rep6 971.6015317047498 971.60042993586 66.108 2 -0.4486558728637506 0.12228012588406484 0.9438714419765777 ['ENST00000366513.8_3_1:246829906-246830032:+|nuORF'] 64756 27129 LRRRRFKMRRM True PC9_epitope_Rep3 1604.9456415553998 1604.9440049037898 111.61 3 -0.4486769166504 0.12228012588406484 0.9438714419765777 ['ENSG00000023171|ENST00000635736|GRAMD1B'] 133150 12415 WDANDMVI True PC9_epitope_Rep4 962.41676771018 962.41566993586 55.559 2 -0.4487665256406744 0.12232674607471576 0.9438714419765777 ['nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 10376 6092 CKEFLNRFYK True NCI_RA007_Epitope_Rep1 1346.6805273847801 1346.67889490379 27.733 3 -0.4487669644284261 0.12232674607471576 0.9438714419765777 ['ENSG00000185267|ENST00000465530|CDNF'] 130537 14186 VTWYKNQVP True H1975_Epitope_Rep2 1133.58694426977 1133.58584993586 59.718 2 -0.44878861833800926 0.12234159546569665 0.9438714419765777 ['nc|ENSG00000101605|P52179-2|MYOM1', 'ENSG00000101605|ENST00000356443|MYOM1'] 128460 5772 VSESGPVSP True H1975_Epitope_Rep3 857.4130622287299 857.4125149679301 27.228 1 -0.44885445900763693 0.12235644435421107 0.9438714419765777 ['ENST00000369851.5_1_1:110091277-110091355:+|nuORF'] 120052 13507 VFFEQSKSFP True PC9_epitope_Rep1 1214.5971746003 1214.59552490379 56.81 3 -0.4489640628162228 0.12242861009608878 0.9438714419765777 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3'] 130383 4980 VTVISTER True PC9_epitope_Rep4 903.50254593947 903.50144993586 25.765 2 -0.44897256953204184 0.12242861009608878 0.9438714419765777 ['TMEM202|p.P230S|1|0.27|ENSG00000187806|chr15:72407759-72407759|C/T|missense_variant'] 22482 7741 ETHRQFTL True PC9_epitope_Rep2 1030.5195929859399 1030.51848993586 35.151 2 -0.4490201645493127 0.12242861009608878 0.9438714419765777 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|10|1|sense'] 38097 4480 HENNNGQAAF True NCI_RA007_Epitope_Rep5 1100.4635346618 1100.4624299358602 23.883 2 -0.44903980030892954 0.12242861009608878 0.9438714419765777 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 27947 21978 FQQRRRRRRDP True PC9_epitope_Rep2 1569.8825066215297 1569.8814099358601 90.015 2 -0.44905438402868475 0.12242861009608878 0.9438714419765777 ['PPWD1|p.V596*|1|0.26|ENSG00000113593|chr5:65586169-65586169|G/-|frameshift_variant', 'ENSG00000113593|ENST00000261308|PPWD1', 'ENST00000508982.1_1_5:64859104-64863443:+|nuORF'] 29143 5619 FTTTQGKA True NCI_RA007_Epitope_Rep1 852.4341320264798 852.43302993586 25.919 2 -0.4490643017941578 0.12242861009608878 0.9438714419765777 ['ENSG00000213967|ENST00000594466|ZNF726'] 64810 5446 LRYKNCRRFWN True NCI_RA007_Epitope_Rep1 1554.7990198080197 1554.7973849037903 25.256 3 -0.4491266675254062 0.12247728925955374 0.9438714419765777 ['ENSG00000170791|ENST00000355315|CHCHD7', 'nc|ENSG00000170791|Q9BUK0-2|CHCHD7', 'nc|ENSG00000170791|Q9BUK0-4|CHCHD7'] 32686 13961 GHQFGVTW True PC9_epitope_Rep3 930.4348007328199 930.43370993586 58.776 2 -0.4492619818762898 0.12255358018843987 0.9438714419765777 ['ENSG00000132300|ENST00000254630|PTCD3', 'ENST00000484203.5_1_2:86348636-86354493:+|nuORF', 'ENST00000480102.1_1_2:86348636-86354336:+|nuORF'] 64761 27615 LRRRRFKMRRM True PC9_epitope_Rep5 1604.9456415553998 1604.9440049037898 113.53 3 -0.44928024335336453 0.12255358018843987 0.9438714419765777 ['ENSG00000023171|ENST00000635736|GRAMD1B'] 113980 17848 TRLEQFTFQ True PC9_epitope_Rep6 1168.58767254576 1168.58656993586 81.282 2 -0.44928285641318544 0.12255358018843987 0.9438714419765777 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN'] 105798 18375 SVILASVSVI True PC9_epitope_Rep4 986.60119735158 986.60010993586 78.745 2 -0.4492861208258044 0.12255358018843987 0.9438714419765777 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF'] 65794 12901 LSIVNGLFAE True PC9_epitope_Rep1 1061.57571087973 1061.57460993586 54.496 2 -0.4493345571463783 0.12258533779897832 0.9438714419765777 ['ENSG00000166396|ENST00000398019|SERPINB7', 'nc|ENSG00000166396|O75635-2|SERPINB7'] 23356 8043 EVTMGVAA True H1975_Epitope_Rep2 776.3738402690399 776.37274993586 35.887 2 -0.44934872945265775 0.12259603186684934 0.9438714419765777 ['ENSG00000142530|ENST00000600100|GARIN5A', 'nc|ENSG00000142530|Q6IPT2-2|GARIN5A', 'ENST00000600330.1_1_19:50978580-50979281:-|nuORF'] 64760 27551 LRRRRFKMRRM True PC9_epitope_Rep5 1604.9456415553998 1604.9440049037898 113.19 3 -0.44935140105643157 0.12259603186684934 0.9438714419765777 ['ENSG00000023171|ENST00000635736|GRAMD1B'] 108527 10294 TEFRERLS True PC9_epitope_Rep3 1036.5301576696397 1036.5290699358602 44.544 2 -0.4493671485751684 0.12259603186684934 0.9438714419765777 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 70561 6516 LYWFSHMK True NCI_RA007_Epitope_Rep1 1110.5320722459398 1110.5309699358602 29.361 2 -0.4494006678684588 0.1226215644820296 0.9438714419765777 ['ENST00000523861.1_1_8:120584407-120592491:-|nuORF'] 25405 10868 FEIYDPRNP True H1975_Epitope_Rep2 1149.5454733806098 1149.54436993586 46.833 2 -0.44940325406212617 0.1226215644820296 0.9438714419765777 ['ENST00000545000.1_1_5:64180068-64314145:+|nuORF', 'ENSG00000153015|ENST00000381070|CWC27'] 128107 18389 VRRRKTRRN True NCI_RA007_Epitope_Rep3 1240.77010263824 1240.7690099358601 80.52 2 -0.44941362012661157 0.1226215644820296 0.9438714419765777 ['PRR19|p.E28Nfs*13|1|0.49|ENSG00000188368|chr19:42309664-42309664|G/-|frameshift_variant'] 28479 11441 FSETINTELLK True H1975_Epitope_Rep1 1293.6816325002499 1293.68052993586 48.987 2 -0.4494153349017574 0.1226215644820296 0.9438714419765777 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 67832 7997 LTIHQRIRT True PC9_epitope_Rep6 1136.6778249628398 1136.67616490379 40.224 3 -0.44956147519751266 0.12270198048268981 0.9438714419765777 ['nc|ENSG00000168122|Q9NSJ1|ZNF355P'] 62592 10682 LLVENIERE True H1975_Epitope_Rep3 1113.6029882567298 1113.60188993586 46.164 2 -0.44958167165937835 0.12270198048268981 0.9438714419765777 ['nc|ENSG00000116205|Q96MN5-2|TCEANC2', 'ENSG00000116205|ENST00000234827|TCEANC2'] 116010 13204 TVQWENSF True PC9_epitope_Rep5 1009.4505103666099 1009.44940993586 55.796 2 -0.44959958379881765 0.12271474234301273 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 120203 15048 VFLVAELKN True H1975_Epitope_Rep2 1031.6015317047497 1031.6004299358601 63.033 2 -0.4496198921459479 0.12271474234301273 0.9438714419765777 ['ENSG00000259823|ENST00000590317|LYPD8'] 98291 5882 SIFMWRQHHYQ True H1975_Epitope_Rep3 1531.71428712455 1531.71265490379 27.634 3 -0.44968892726718424 0.12272957889396245 0.9438714419765777 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 124719 5953 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 30.397 3 -0.44971066312457497 0.12274441494309246 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 67213 12051 LTDKPVLGCRP True H1975_Epitope_Rep1 1197.65397828377 1197.65288993586 51.364 2 -0.4497485186782895 0.12275509858964385 0.9438714419765777 ['ENST00000592087.1_1_19:36980552-36981209:+|nuORF'] 89472 9077 REQLKEIYPSW True H1975_Epitope_Rep3 1447.7459640923098 1447.7448699358602 39.901 2 -0.44978981939875484 0.12275509858964385 0.9438714419765777 ['ENST00000425348.1_1_X:53483765-53483951:-|nuORF'] 120061 23523 VFFLIVVICK True H1975_Epitope_Rep3 1179.70897397875 1179.70732490379 98.157 3 -0.4498080502703279 0.12275509858964385 0.9438714419765777 ['ENSG00000134294|ENST00000256689|SLC38A2', 'nc|ENSG00000134294|Q96QD8-2|SLC38A2'] 85441 17816 QLFLDAIHP True PC9_epitope_Rep5 1052.5654805492 1052.5643899358602 73.548 2 -0.4498395527237604 0.12276785714285714 0.9438714419765777 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX'] 28968 20950 FTFGAEVVA True PC9_epitope_Rep4 939.4701831820298 939.46963496793 88.744 1 -0.4498541912019009 0.12276785714285714 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENST00000532279.1_1_11:67166350-67167062:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 45771 4041 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 20.673 2 -0.44986575646502064 0.12277853869696816 0.9438714419765777 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 100420 6758 SLPASLGR True NCI_RA007_Epitope_Rep5 799.45520182423 799.45410993586 32.671 2 -0.44986584111831274 0.12277853869696816 0.9438714419765777 ['ENSG00000121058|ENST00000240316|COIL', 'COIL|p.S516Yfs*6|1|0.1|ENSG00000121058|chr17:56946453-56946453|G/-|frameshift_variant'] 128108 18482 VRRRKTRRN True NCI_RA007_Epitope_Rep3 1240.77010263824 1240.7690099358601 80.875 2 -0.44986624550910204 0.12277853869696816 0.9438714419765777 ['PRR19|p.E28Nfs*13|1|0.49|ENSG00000188368|chr19:42309664-42309664|G/-|frameshift_variant'] 78104 15895 PAPALALAA True PC9_epitope_Rep1 793.46978925921 793.46868993586 65.95 2 -0.4498767887080797 0.1227933716604667 0.9438714419765777 ['ENST00000551489.5_1_12:107349705-107350883:+|nuORF'] 140012 6098 YVLEQQRI True NCI_RA007_Epitope_Rep4 1047.5712942056298 1047.57018993586 30.071 2 -0.44990047335207206 0.12280612762503805 0.9438714419765777 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000263956|ENST00000682118|NBPF11'] 57001 8842 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 38.963 2 -0.44990383193247485 0.12280612762503805 0.9438714419765777 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 120555 20638 VGAAVTEQELL True PC9_epitope_Rep2 1128.60265390356 1128.60154993586 84.818 2 -0.45011622393322454 0.12285477571310215 0.9438714419765777 ['ENSG00000175970|ENST00000344651|UNC119B', 'ENST00000539658.1_1_12:121148334-121149523:+|nuORF'] 79 8129 AAALGEAAG True PC9_epitope_Rep5 729.36571811349 729.36516496793 36.207 1 -0.45018421252728974 0.12288443655423113 0.9438714419765777 ['ENSG00000187954|ENST00000530374|ZFTRAF1'] 68204 12983 LTQKWWGDMA True H1975_Epitope_Rep3 1234.5804789903398 1234.57938993586 55.173 2 -0.4501899775893885 0.12288443655423113 0.9438714419765777 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4', 'nc|ENSG00000130529|Q8TD43-3|TRPM4'] 3577 14067 AGPEELGLQV True PC9_epitope_Rep6 1011.5236753068699 1011.52256993586 65.981 2 -0.4502228328826037 0.1229289240549131 0.9438714419765777 ['ENSG00000146700|ENST00000275560|SSC4D'] 12630 13673 DLEEPQPVP True H1975_Epitope_Rep2 1022.4920408254198 1022.4909499358599 57.735 2 -0.45030098273882674 0.1229289240549131 0.9438714419765777 ['TUT1|p.Q564Tfs*71|1|0.25|ENSG00000149016|chr11:62576026-62576029|TCTG/-|frameshift_variant', 'ENSG00000149016|ENST00000476907|TUT1'] 4580 11835 ALAALMIA True PC9_epitope_Rep1 772.4516966669199 772.45058993586 50.389 2 -0.4503044050260708 0.1229289240549131 0.9438714419765777 ['ENSG00000167311|ENST00000397068|ART5', 'nc|ENSG00000167311|Q96L15-2|ART5'] 3139 8609 AGDRSLADVII True PC9_epitope_Rep4 1128.6138872935999 1128.61225490379 40.596 3 -0.45048986558410337 0.12300305986171453 0.9438714419765777 ['ENST00000471105.5_1_1:201965436-201974841:+|nuORF', 'ENSG00000176393|ENST00000295640|RNPEP'] 115746 14722 TVLNLHQHLK True PC9_epitope_Rep4 1201.6931406738101 1201.69204993586 64.562 2 -0.45049503979523614 0.12300305986171453 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000557060.1_1_14:64540716-64565614:+|nuORF'] 25277 19495 FEDTVAELELF True PC9_epitope_Rep2 1311.6234489177898 1311.62234993586 80.369 2 -0.4504974724386254 0.12300305986171453 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant'] 99658 8826 SLGAAVYEEI True PC9_epitope_Rep1 1050.5233409537 1050.5222499358601 38.791 2 -0.4505360870653064 0.12300305986171453 0.9438714419765777 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 29397 16627 FVFDRPLPVSR True PC9_epitope_Rep5 1331.73500548579 1331.73334490379 68.962 3 -0.45053803276730425 0.12300305986171453 0.9438714419765777 ['ENST00000526443.5_1_11:14535901-14541492:-|nuORF', 'ENST00000528307.5_1_11:14535901-14541893:-|nuORF', 'ENSG00000129084|ENST00000396394|PSMA1', 'nc|ENSG00000129084|P25786-2|PSMA1'] 56547 16452 LDVKEHINI True PC9_epitope_Rep2 1079.5975089534702 1079.59640993586 68.523 2 -0.4505673915592236 0.12301580593356437 0.9438714419765777 ['ENSG00000154237|ENST00000388948|LRRK1', 'ENST00000525284.5_1_15:101565016-101602660:+|nuORF'] 59708 14561 LGTRFAPVP True PC9_epitope_Rep1 956.5443511817998 956.54324993586 60.834 2 -0.45058385870542816 0.12301580593356437 0.9438714419765777 ['ENSG00000175065|ENST00000308128|DSG4', 'nc|ENSG00000175065|Q86SJ6-2|DSG4'] 101843 11281 SPIYWDTIP True H1975_Epitope_Rep3 1090.53351171458 1090.5324099358602 48.497 2 -0.45073258145389716 0.12310058651522066 0.9438714419765777 ['ENSG00000144045|ENST00000404568|DQX1', 'nc|ENSG00000144045|Q8TE96-3|DQX1', 'DQX1|p.L288Ffs*74|1|0.15|ENSG00000144045|chr2:74523490-74523490|C/-|frameshift_variant', 'ENST00000473508.1_1_2:74750418-74753390:-|nuORF', 'nc|ENSG00000144045|Q8TE96-2|DQX1', 'ENST00000495597.1_1_2:74751010-74751370:-|nuORF'] 100810 14848 SLRTALILH True PC9_epitope_Rep5 1022.62366413166 1022.62256993586 62.114 2 -0.45074121066304446 0.12310058651522066 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 119223 12699 VEKRENLET True PC9_epitope_Rep3 1116.5775017848798 1116.57640993586 53.87 2 -0.45074883007380506 0.12310058651522066 0.9438714419765777 ['ENST00000370713.5_1_1:82266156-82302585:+|nuORF'] 93232 16484 RRRRRRRRRA True NCI_RA007_Epitope_Rep5 1493.9576776808099 1493.9560349037902 70.164 3 -0.4507757211433885 0.12310058651522066 0.9438714419765777 ['ENST00000253008.2_1_9:133556683-133557598:+|nuORF'] 12444 17186 DKLLIRYEKLP True NCI_RA007_Epitope_Rep2 1386.8234861370197 1386.8223899358602 71.589 2 -0.4507821223838577 0.12310058651522066 0.9438714419765777 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2'] 45815 19248 ISPIIDLH True PC9_epitope_Rep3 906.51746772762 906.51636993586 79.259 2 -0.4508302583867992 0.12310058651522066 0.9438714419765777 ['ENSG00000116221|ENST00000360840|MRPL37'] 8886 12970 AVFYERFIEDK True H1975_Epitope_Rep1 1415.7085159544297 1415.7074099358601 54.967 2 -0.45083604184911835 0.12310058651522066 0.9438714419765777 ['ENST00000474944.5_1_8:94767142-94822123:+|nuORF', 'ENSG00000164953|ENST00000453321|TMEM67'] 77555 13355 NYSNIRFQF True NCI_RA007_Epitope_Rep1 1187.57235683479 1187.5712499358601 55.952 2 -0.4508515618251432 0.12310058651522066 0.9438714419765777 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 46298 9818 ITEMDERNRP True PC9_epitope_Rep2 1259.59283457919 1259.59172993586 43.101 2 -0.45092754843437816 0.12313231018862822 0.9438714419765777 ['EPHA6|p.H160R|1|0.42|ENSG00000080224|chr3:96987358-96987358|A/G|missense_variant'] 132472 20897 VYPASKMFPFI True PC9_epitope_Rep4 1298.67331674602 1298.67220993586 88.539 2 -0.4509707201330975 0.12315986952186185 0.9438714419765777 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 49518 22837 KKFEKRHIEIF True PC9_epitope_Rep1 1473.8456185639295 1473.84452993586 92.64 2 -0.4510099034401304 0.12315986952186185 0.9438714419765777 ['ENSG00000079246|ENST00000392132|XRCC5'] 61524 10650 LLGC[Carbamidomethyl]EIDD True H1975_Epitope_Rep3 933.4113482559999 933.4107949679301 46.039 1 -0.4510254677537235 0.12315986952186185 0.9438714419765777 ['ENST00000556703.1_1_14:57507861-57508260:+|nuORF'] 58143 16463 LESEVFPDP True PC9_epitope_Rep1 1031.4811417885498 1031.48004993586 68.15 2 -0.45110146082651487 0.12317260727745948 0.9438714419765777 ['ENST00000225964.9_1_17:48268227-48270392:-|nuORF'] 125190 13494 VLQFSSNTV True PC9_epitope_Rep5 993.51311062317 993.51200993586 56.924 2 -0.4511137852225365 0.12317260727745948 0.9438714419765777 ['ENST00000597544.5_1_19:53683054-53696636:-|nuORF', 'ENST00000596373.1_1_19:53683054-53693528:-|nuORF'] 129918 10605 VTLTSLDI True PC9_epitope_Rep6 860.485498893 860.48440993586 51.61 2 -0.4512910779983656 0.12325294485474303 0.9438714419765777 ['ENSG00000175224|ENST00000683050|ATG13', 'nc|ENSG00000175224|O75143-4|ATG13', 'nc|ENSG00000175224|O75143-3|ATG13', 'nc|ENSG00000175224|O75143-2|ATG13', 'nc|ENSG00000175224|O75143|ATG13'] 93777 7724 RTTFVVGG True NCI_RA007_Epitope_Rep2 835.4552018242298 835.45410993586 34.672 2 -0.4512969216503507 0.12325294485474303 0.9438714419765777 ['ENST00000397722.5_1_16:450423-450627:+|nuORF'] 7769 4818 ASVLDALDPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 23.623 2 -0.4514089050219949 0.12328466166430069 0.9438714419765777 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 91102 12448 RLLWVFRRRWR True PC9_epitope_Rep6 1642.9797014816597 1642.97860993586 59.309 2 -0.45156465983211225 0.12333327700133506 0.9438714419765777 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 120505 16519 VFWYNYLP True PC9_epitope_Rep1 1100.5331177917599 1100.53202993586 68.365 2 -0.45161152152965994 0.12337980566117449 0.9438714419765777 ['ENSG00000178467|ENST00000383729|P4HTM', 'nc|ENSG00000178467|Q9NXG6-3|P4HTM', 'ENST00000484115.5_1_3:49043466-49044337:+|nuORF', 'ENST00000472301.5_1_3:49043105-49044337:+|nuORF'] 78460 3926 PDAETEAQQRL True NCI_RA007_Epitope_Rep2 1256.5996937814398 1256.5985899358602 19.906 2 -0.45162280864931753 0.12337980566117449 0.9438714419765777 ['ENST00000486492.5_1_7:149255763-149318218:-|nuORF'] 12941 8733 DLNSGNIDVP True NCI_RA007_Epitope_Rep1 1042.49310345458 1042.49200993586 37.972 2 -0.4516406664202095 0.12339253426162192 0.9438714419765777 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 37194 17736 GVVAGVVAV True PC9_epitope_Rep5 769.4697892592098 769.46868993586 73.239 2 -0.45166639370573697 0.12339253426162192 0.9438714419765777 ['PCDH1|p.K1028Nfs*7|1|0.24|ENSG00000156453|chr5:141863250-141863250|G/-|frameshift_variant', 'nc|ENSG00000156453|Q08174|PCDH1', 'ENSG00000156453|ENST00000287008|PCDH1', 'ENST00000511044.1_1_5:141242715-141245657:-|nuORF'] 14334 11886 DTDLVYQRQWR True H1975_Epitope_Rep1 1478.72662563006 1478.72552993586 50.72 2 -0.45168025660348265 0.12342424549663726 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 27033 24486 FLLWYYRLVKV True PC9_epitope_Rep2 1498.87004240662 1498.8683849037902 99.774 3 -0.4517471729600462 0.12345178351160001 0.9438714419765777 ['ENST00000419016.6_1_9:33281251-33281398:+|nuORF'] 104649 5725 SSYPVCVSK True NCI_RA007_Epitope_Rep5 968.4637179026 968.46262993586 28.709 2 -0.45178292446186796 0.12345178351160001 0.9438714419765777 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1', 'ENST00000549820.1_1_12:113344820-113354315:+|nuORF'] 33726 6542 GLRPEERLIR True NCI_RA007_Epitope_Rep3 1237.72550343125 1237.72384490379 32.778 3 -0.451806059184988 0.12345178351160001 0.9438714419765777 ['ENSG00000170881|ENST00000303545|RNF139'] 86892 23967 QRRRLHRRRRS True PC9_epitope_Rep2 1575.9519235940297 1575.95026490379 97.68 3 -0.45182426160038636 0.1234645083892334 0.9438714419765777 ['ENST00000215832.10_1_22:22221790-22221904:-|nuORF'] 57309 22509 LEGLGLLDV True PC9_epitope_Rep2 927.52769805815 927.52660993586 92.07 2 -0.4518474336565594 0.1234645083892334 0.9438714419765777 ['ENST00000467496.5_1_X:129474252-129484631:+|nuORF'] 43337 7607 IHHWRDRRHQK True NCI_RA007_Epitope_Rep1 1567.8344937999502 1567.8328349037902 33.581 3 -0.4518820240749542 0.12349412857987666 0.9438714419765777 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T'] 3806 10848 AGVLTGLG True PC9_epitope_Rep5 686.39628996578 686.39574496793 46.714 1 -0.4519617902664095 0.12349412857987666 0.9438714419765777 ['ENSG00000100156|ENST00000681075|SLC16A8'] 65823 13835 LSKGNVDVAL True PC9_epitope_Rep5 1014.57095985246 1014.56986993586 58.236 2 -0.45201018468453963 0.12352583381205015 0.9438714419765777 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'nc|ENSG00000168026|Q8NDW8-6|TTC21A', 'ENST00000471025.1_1_3:39170643-39171861:+|nuORF'] 33763 10980 GLSLQAQLL True H1975_Epitope_Rep1 941.5545815123298 941.55348993586 47.199 2 -0.4520416058439612 0.12355753797286566 0.9438714419765777 ['ENST00000609439.2_2_7:45847154-45848297:+|nuORF'] 65411 18269 LSESRVLVL True PC9_epitope_Rep1 1014.6073453611799 1014.60624993586 75.062 2 -0.4520611811081302 0.12358924106237751 0.9438714419765777 ['ENSG00000168806|ENST00000305641|LCMT2', 'LCMT2|p.H641Qfs*5|1|0.15|ENSG00000168806|chr15:43328567-43328568|-/C|frameshift_variant', 'ENST00000567039.1_1_15:43620629-43622752:-|nuORF'] 77951 6640 PALADGPAPV True NCI_RA007_Epitope_Rep5 906.4810822188999 906.47998993586 32.209 2 -0.4520861727947469 0.12359987160210167 0.9438714419765777 ['ENSG00000146216|ENST00000259750|TTBK1'] 124862 4815 VLLLKLRKRH True NCI_RA007_Epitope_Rep1 1274.86629443886 1274.8651899358601 22.81 2 -0.4521141313740985 0.12359987160210167 0.9438714419765777 ['ENSG00000090776|ENST00000204961|EFNB1'] 13390 7462 DNIQTVKRLRT True NCI_RA007_Epitope_Rep2 1342.7680965192199 1342.76698993586 33.652 2 -0.4521254065311656 0.12359987160210167 0.9438714419765777 48397 3003 KEDEDYMPIK True NCI_RA007_Epitope_Rep1 1266.5802042068196 1266.57856490379 15.548 3 -0.45217132260443316 0.12361467765914312 0.9438714419765777 ['ENSG00000131013|ENST00000253329|PPIL4'] 32353 16099 GGDDSFNTF True PC9_epitope_Rep4 958.3668403123 958.36629496793 69.861 1 -0.45219716321264775 0.12362948321592081 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'ENST00000530835.1_1_11:90015825-90016947:+|nuORF', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'nc|ENSG00000123416|P68363-2|TUBA1B', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'ENST00000548363.1_1_12:49580068-49582762:-|nuORF', 'ENST00000551324.5_1_12:49523262-49525083:-|nuORF', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 15078 8128 EAAVVAAAV True H1975_Epitope_Rep1 799.4439684341899 799.44286993586 36.203 2 -0.45235450930154747 0.12367598614747867 0.9438714419765777 ['ENSG00000154174|ENST00000284320|TOMM70'] 133745 14228 WLLKALQQF True PC9_epitope_Rep5 1145.6597152872098 1145.65807490379 59.734 3 -0.4523851208660316 0.12367598614747867 0.9438714419765777 ['nc|ENSG00000162365|Q5TCH4-2|CYP4A22', 'ENSG00000162365|ENST00000371891|CYP4A22', 'nc|ENSG00000187048|Q02928-2|CYP4A11', 'ENSG00000187048|ENST00000310638|CYP4A11'] 21731 4855 ESALAQQAK True H1975_Epitope_Rep3 944.49270953176 944.49160993586 23.801 2 -0.4524457494170672 0.12370559318884403 0.9438714419765777 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 56288 11157 LDQPSFVPKSP True H1975_Epitope_Rep1 1213.6342883850098 1213.6331899358602 47.883 2 -0.4524694202355665 0.12370559318884403 0.9438714419765777 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 6575 13352 APVVRARA True PC9_epitope_Rep3 838.5137197598599 838.51262993586 56.393 2 -0.4525274618306642 0.1237183060524671 0.9438714419765777 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44'] 136789 7755 YISKPENL True PC9_epitope_Rep4 962.50729696674 962.50618993586 37.222 2 -0.4525293826231376 0.1237183060524671 0.9438714419765777 ['ENSG00000102547|ENST00000409308|CAB39L', 'ENST00000493540.1_1_2:231678823-231682621:+|nuORF', 'ENSG00000135932|ENST00000258418|CAB39'] 82702 7691 PVPGNKVWNI True NCI_RA007_Epitope_Rep4 1122.61857875122 1122.61693490379 36.246 3 -0.45259613680901833 0.12375 0.9438714419765777 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96', 'CD96|p.P408Lfs*10|1|0.26|ENSG00000153283|chr3:111606786-111606786|C/-|frameshift_variant'] 57003 10181 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 44.113 2 -0.45260809728230966 0.12376480127024882 0.9438714419765777 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 77735 4757 PAAPAAEEP True NCI_RA007_Epitope_Rep4 851.40249754503 851.40140993586 24.731 2 -0.45267059554872285 0.12377542057969056 0.9438714419765777 ['ENSG00000162522|ENST00000401073|KIAA1522'] 5687 8640 APAPLTSA True PC9_epitope_Rep3 726.39120458534 726.39065496793 38.185 1 -0.4526789868103692 0.12377542057969056 0.9438714419765777 ['ENSG00000247596|ENST00000305533|TWF2'] 129811 16434 VTLDNVTL True PC9_epitope_Rep5 873.48074786573 873.47964993586 68.212 2 -0.45270396010915204 0.12377542057969056 0.9438714419765777 ['ENSG00000165283|ENST00000356493|STOML2', 'nc|ENSG00000165283|Q9UJZ1-2|STOML2'] 97237 9596 SFLRCYRP True PC9_epitope_Rep4 1040.5225701913998 1040.52146993586 44.537 2 -0.4528575789095093 0.12381981860253011 0.9438714419765777 ['ENST00000392975.6_1_17:61511323-61511650:-|nuORF'] 94384 17277 RYETWRRRRFR True NCI_RA007_Epitope_Rep2 1680.9185577770797 1680.91746993586 71.942 2 -0.45287845919197844 0.12381981860253011 0.9438714419765777 ['ERICH3|p.S250Y|1|0.11|ENSG00000178965|chr1:74631783-74631783|G/T|missense_variant'] 116773 16600 TYLKAVKLF True PC9_epitope_Rep2 1081.65356727761 1081.6524699358602 69.094 2 -0.4528988187197913 0.12381981860253011 0.9438714419765777 ['ENSG00000136381|ENST00000258886|IREB2'] 16598 6163 EERQQWESRER True NCI_RA007_Epitope_Rep1 1531.7127664710695 1531.71112490379 28.009 3 -0.4529430330868695 0.12384523146037053 0.9438714419765777 ['DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-3|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 7417 17334 ASATSAFVSI True PC9_epitope_Rep2 952.4865615221601 952.48546993586 71.93 2 -0.4529433070958872 0.12384523146037053 0.9438714419765777 ['nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-4|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1', 'ENSG00000101391|ENST00000346416|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6|CDK5RAP1', 'nc|ENSG00000101391|Q96SZ6-5|CDK5RAP1'] 57724 14778 LENLLSHTI True PC9_epitope_Rep3 1038.57095985246 1038.5698699358602 61.98 2 -0.4529570523526522 0.12384523146037053 0.9438714419765777 ['ENSG00000239810|ENST00000619922|PRAMEF11', 'ENSG00000270601|ENST00000622421|PRAMEF5', 'ENSG00000232423|ENST00000376189|PRAMEF6', 'ENSG00000280267|ENST00000624207|PRAMEF26', 'ENSG00000274764|ENST00000436041|PRAMEF27', 'ENSG00000243073|ENST00000235349|PRAMEF4', 'ENSG00000229571|ENST00000619661|PRAMEF25', 'ENSG00000204505|ENST00000415919|PRAMEF9', 'ENSG00000204501|ENST00000376152|PRAMEF15'] 14494 6657 DTWESLQK True NCI_RA007_Epitope_Rep2 1005.47672511445 1005.4761749679301 30.506 1 -0.45298672619349817 0.12384523146037053 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 108746 4176 TENNDADY True H1975_Epitope_Rep2 940.3410194872799 940.33992993586 21.17 2 -0.45307384708541554 0.12387691684118084 0.9438714419765777 ['chr3:119173638-119187775|271|26.94|0.21|7.04|+|ENST00000497685|UPK1B,UPK1B', 'chr3:119173638-119186679|214|13.77|0.12|6.86|+|ENST00000494855|UPK1B,UPK1B', 'chr3:119190319-119191006|253|13.0|0.2|6.03|+|ENST00000460625|UPK1B,UPK1B', 'ENSG00000114638|ENST00000264234|UPK1B'] 17029 10194 EGLTDVIRDVP True NCI_RA007_Epitope_Rep1 1212.6350166609998 1212.6339099358602 43.664 2 -0.4531598485382001 0.12390650859594014 0.9438714419765777 ['ENSG00000155034|ENST00000382368|FBXL18'] 26546 18529 FIVHTIEEI True PC9_epitope_Rep4 1099.5913609438699 1099.59026993586 79.347 2 -0.4532003993401358 0.12390650859594014 0.9438714419765777 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000556343.1_1_14:69350028-69351010:-|nuORF'] 23742 20243 EYIQFVPLL True NCI_RA007_Epitope_Rep4 1120.6168474157198 1120.61574993586 87.603 2 -0.4532322781636739 0.12391293334909403 0.9438714419765777 ['ENSG00000179409|ENST00000319004|GEMIN4'] 57035 6502 LEEFFDDP True H1975_Epitope_Rep3 1010.4232925592598 1010.42218993586 29.981 2 -0.45323258048024967 0.12391293334909403 0.9438714419765777 ['ENSG00000136522|ENST00000476781|MRPL47', 'nc|ENSG00000136522|Q9HD33-2|MRPL47'] 12013 7870 DIAYLQEIEDP True H1975_Epitope_Rep2 1304.6136125100797 1304.61250993586 35.219 2 -0.4532336146724317 0.12391293334909403 0.9438714419765777 ['ENSG00000065183|ENST00000349139|WDR3'] 67017 10917 LTALTEKSKL True NCI_RA007_Epitope_Rep2 1102.65977485686 1102.6586699358602 47.072 2 -0.4532478801306315 0.12391293334909403 0.9438714419765777 ['RYR1|p.R3707L|1|0.4|ENSG00000196218|chr19:38529036-38529036|G/T|missense_variant'] 58049 7405 LERLIKDEI True PC9_epitope_Rep4 1127.65502382959 1127.6533649037901 35.831 3 -0.453269520041793 0.12391293334909403 0.9438714419765777 ['nc|ENSG00000276141|Q1A5X7|WHAMMP3'] 17659 4390 EHRGPVQVT True PC9_epitope_Rep6 1021.53049202281 1021.52938993586 24.002 2 -0.4532758121682918 0.12392563448776617 0.9438714419765777 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'chr19:38596001-38596078|190|16.73|0.04|8.81|-|2|MAP4K1,None|3', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF'] 124741 7661 VLKKKKKKKK True PC9_epitope_Rep2 1254.92274668582 1254.9211049037901 34.838 3 -0.4532901123842678 0.12392563448776617 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 45123 7461 IQVAEAEVK True PC9_epitope_Rep5 985.54441075145 985.54330993586 33.653 2 -0.4533044045315514 0.12393833476858652 0.9438714419765777 ['ENSG00000117724|ENST00000366955|CENPF'] 39560 12162 HPHKIIVMY True NCI_RA007_Epitope_Rep4 1136.6164705762399 1136.6153699358601 53.779 2 -0.45331503173923576 0.12393833476858652 0.9438714419765777 ['ENSG00000163660|ENST00000295926|CCNL1', 'nc|ENSG00000163660|Q9UK58-6|CCNL1', 'ENST00000476367.5_1_3:156867074-156874849:-|nuORF', 'nc|ENSG00000163660|Q9UK58-4|CCNL1', 'ENST00000473872.5_1_1:1328774-1333626:-|nuORF', 'ENST00000482621.5_1_1:1328164-1330914:-|nuORF', 'ENST00000471930.5_1_1:1328164-1333737:-|nuORF', 'ENST00000478454.5_1_3:156869964-156874795:-|nuORF', 'ENST00000475298.5_1_3:156869697-156874849:-|nuORF', 'ENST00000479596.5_1_3:156869964-156874849:-|nuORF', 'nc|ENSG00000221978|Q96S94-5|CCNL2', 'nc|ENSG00000221978|Q96S94-2|CCNL2', 'nc|ENSG00000221978|Q96S94-4|CCNL2', 'ENSG00000221978|ENST00000400809|CCNL2'] 106214 18051 SVPNKDVFQEL True PC9_epitope_Rep3 1274.65066672514 1274.6495699358602 74.632 2 -0.45338670375715057 0.12396791895314478 0.9438714419765777 ['ARHGAP15-KYNU|1|fusion', 'ENSG00000115919|ENST00000264170|KYNU'] 89541 3393 RERPPEEVAA True NCI_RA007_Epitope_Rep5 1152.58873517492 1152.5870849037901 18.704 3 -0.4534064542042863 0.12396791895314478 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 29804 12758 FVTPADVVS True NCI_RA007_Epitope_Rep3 933.4807478657299 933.47964993586 57.419 2 -0.45343002877808436 0.12399331408600517 0.9438714419765777 ['ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3', 'ENSG00000120756|ENST00000457734|PLS1'] 129103 9588 VTAVSLPR True PC9_epitope_Rep1 841.5021520166499 841.50104993586 41.736 2 -0.45343247505024614 0.12399331408600517 0.9438714419765777 ['ENST00000566159.1_1_16:1364579-1364975:+|nuORF'] 46408 14348 ITKGLLDNP True PC9_epitope_Rep2 969.5494961318899 969.54838993586 60.451 2 -0.45345503627829864 0.12399331408600517 0.9438714419765777 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF', 'KNL1|p.I434Nfs*2|1|0.1|ENSG00000137812|chr15:40621487-40621487|T/-|frameshift_variant'] 83547 9935 QDNENVVNEY True H1975_Epitope_Rep2 1222.5102100707 1222.5091099358601 43.204 2 -0.4534734383915998 0.12399331408600517 0.9438714419765777 ['CON__P02676'] 133746 14317 WLLKALQQF True PC9_epitope_Rep5 1145.6597152872098 1145.65807490379 60.072 3 -0.45348452431990105 0.12400182330795334 0.9438714419765777 ['nc|ENSG00000162365|Q5TCH4-2|CYP4A22', 'ENSG00000162365|ENST00000371891|CYP4A22', 'nc|ENSG00000187048|Q02928-2|CYP4A11', 'ENSG00000187048|ENST00000310638|CYP4A11'] 132122 8914 VYIRGSKIRF True PC9_epitope_Rep4 1237.7295261825295 1237.72789490379 41.825 3 -0.45349215533173465 0.12400182330795334 0.9438714419765777 ['nc|ENSG00000286070|P62318-2|SNRPD3', 'ENSG00000100028|ENST00000215829|SNRPD3'] 81983 6148 PSSAPARRGA True NCI_RA007_Epitope_Rep2 968.5151763118399 968.51406993586 28.523 2 -0.4535028354546373 0.12400182330795334 0.9438714419765777 ['ENST00000357244.6_1_9:125667414-125667516:-|nuORF'] 18099 10710 EILATLYLS True NCI_RA007_Epitope_Rep2 1021.5695628701301 1021.5689749679301 46.258 1 -0.4535292674731725 0.12400182330795334 0.9438714419765777 ['ENST00000595753.5_1_19:16664089-16664293:-|nuORF'] 57467 8015 LEIWMEMAP True PC9_epitope_Rep6 1118.5140392233 1118.5129499358602 40.304 2 -0.4535804459669002 0.12402930650280235 0.9438714419765777 ['nc|ENSG00000214900|Q8WXQ3|LINC01599'] 107164 16975 SYNNFFRMF True NCI_RA007_Epitope_Rep2 1224.53861417836 1224.53750993586 70.765 2 -0.45359443891067275 0.12402930650280235 0.9438714419765777 ['EIF3K-PPP2R2A|1|fusion', 'PPP2R2A|p.D370H|1|0.19|ENSG00000221914|chr8:26370177-26370177|G/C|missense_variant', 'ENST00000517754.1_1_8:26221160-26227926:+|nuORF', 'ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 100642 13346 SLQRGLEL True PC9_epitope_Rep1 914.5185303567798 914.51742993586 56.195 2 -0.45362703299724844 0.12402930650280235 0.9438714419765777 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1'] 94599 18719 RYKLYQEMF True PC9_epitope_Rep3 1276.6274291827597 1276.62577490379 77.228 3 -0.45363486109202183 0.12404409406283236 0.9438714419765777 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 12296 9662 DISSYVKE True NCI_RA007_Epitope_Rep1 939.45492704071 939.45382993586 41.581 2 -0.45367953417360485 0.1240588811236031 0.9438714419765777 ['ENST00000374994.8_2_9:101915367-101915715:+|nuORF'] 10221 15330 CEMLLTSYNK True PC9_epitope_Rep2 1200.5518812839998 1200.5507899358602 64.247 2 -0.45371378464005857 0.12407366768513986 0.9438714419765777 ['ENST00000477952.1_1_2:162016988-162017924:+|nuORF', 'ENST00000494976.1_1_2:162016988-162019075:+|nuORF'] 125120 10232 VLPKRQSNHRQ True NCI_RA007_Epitope_Rep1 1361.76401419829 1361.76290993586 43.811 2 -0.4537959639495739 0.12412221471978394 0.9438714419765777 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 56409 9545 LDSEWLGMP True H1975_Epitope_Rep2 1046.4742825863 1046.47318993586 41.686 2 -0.45381972712339164 0.12413280893945276 0.9438714419765777 ['nc|ENSG00000157119|Q2TBA0-2|KLHL40', 'ENSG00000157119|ENST00000287777|KLHL40'] 136510 8903 YHLMKSSFIL True NCI_RA007_Epitope_Rep3 1237.65291565461 1237.65127490379 42.105 3 -0.45383507518852995 0.12413280893945276 0.9438714419765777 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13'] 26652 18939 FLAGAVTSV True PC9_epitope_Rep1 863.4752685624701 863.47416993586 77.633 2 -0.453858376146085 0.12413280893945276 0.9438714419765777 ['ENSG00000161179|ENST00000292778|YDJC', 'ENST00000468686.5_1_22:21984138-21984303:-|nuORF', 'nc|ENSG00000161179|A8MPS7-3|YDJC', 'nc|ENSG00000161179|A8MPS7-2|YDJC'] 42410 10934 IEPLTFYLDP True PC9_epitope_Rep1 1206.61724133854 1206.6161499358602 46.944 2 -0.4539350528865499 0.12417925563338679 0.9438714419765777 ['ENSG00000197594|ENST00000647893|ENPP1', 'ENPP1|p.I889Sfs*24|1|0.15|ENSG00000197594|chr6:131890396-131890396|G/-|frameshift_variant', 'ENST00000459624.1_1_6:132185674-132198340:+|nuORF'] 7409 8289 ASAPGYLAITK True NCI_RA007_Epitope_Rep3 1090.60225998074 1090.60116993586 39.726 2 -0.4539388456465436 0.12417925563338679 0.9438714419765777 ['nc|ENSG00000109472|P16870-2|CPE', 'ENSG00000109472|ENST00000402744|CPE'] 126476 13679 VPLYLSKAP True H1975_Epitope_Rep2 986.5800679841799 986.57896993586 57.757 2 -0.4540578027642252 0.12424257768325822 0.9438714419765777 ['nc|ENSG00000205307|Q8TEE9|SAP25', 'ENSG00000205307|ENST00000622764|SAP25'] 49509 7835 KKEISKLYQDM True NCI_RA007_Epitope_Rep1 1381.72753714685 1381.72588490379 34.467 3 -0.4540741069030771 0.12424257768325822 0.9438714419765777 ['ENSG00000198865|ENST00000361970|CCDC152'] 66916 12362 LSYASQNFIP True H1975_Epitope_Rep3 1138.56587447202 1138.56476993586 52.737 2 -0.4540892101333116 0.12425735889819066 0.9438714419765777 ['ENSG00000166454|ENST00000299575|ATMIN', 'nc|ENSG00000166454|O43313-2|ATMIN'] 43054 17053 IGGSSVLPAV True PC9_epitope_Rep1 898.5123823471799 898.51128993586 70.42 2 -0.4541338690399816 0.1242721396141707 0.9438714419765777 ['ENST00000565573.1_1_16:30900076-30905983:+|nuORF'] 121901 3582 VGPHLTAK True NCI_RA007_Epitope_Rep4 821.47593726881 821.47484993586 19.812 2 -0.454291774173214 0.12433545425393665 0.9438714419765777 ['ENSG00000185361|ENST00000327473|TNFAIP8L1'] 86048 13097 QPLPTAGASV True PC9_epitope_Rep4 939.5025459394699 939.50144993586 58.27 2 -0.4542929333122277 0.12433545425393665 0.9438714419765777 ['DGCR2|p.L504V|1|0.1|ENSG00000070413|chr22:19039008-19039008|G/C|missense_variant'] 42215 16819 IEGRVVNAL True PC9_epitope_Rep3 969.5607295219299 969.55962993586 69.846 2 -0.4543111840561595 0.1243629122084585 0.9438714419765777 ['ENST00000466410.5_1_2:128398362-128421974:-|nuORF', 'ENST00000484252.5_1_2:128398362-128399806:-|nuORF', 'nc|ENSG00000072163|Q7Z4I7-3|LIMS2', 'ENSG00000072163|ENST00000355119|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-5|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-2|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-4|LIMS2'] 103983 20198 SRRLAPVG True PC9_epitope_Rep6 854.5086343794198 854.50752993586 90.363 2 -0.4543345834824405 0.1243629122084585 0.9438714419765777 ['ENST00000464942.6_1_12:122710297-122710606:-|nuORF'] 22848 13109 EVEHFFCEVP True PC9_epitope_Rep1 1234.53286009158 1234.5317699358602 55.291 2 -0.45433814139314177 0.1243629122084585 0.9438714419765777 ['OR2B2|p.D175E|1|0.23|ENSG00000168131|chr6:27911795-27911795|A/C|missense_variant'] 30733 7520 GANICWFISSK True NCI_RA007_Epitope_Rep2 1224.59612905448 1224.59502993586 33.877 2 -0.45444009413305614 0.1243924665856622 0.9438714419765777 ['ENST00000461275.1_1_7:81680257-81714133:-|nuORF'] 5912 9261 APHIVVGT True PC9_epitope_Rep6 792.4493881678001 792.44828993586 45.774 2 -0.45445246921625293 0.1243924665856622 0.9438714419765777 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENST00000468362.5_1_3:186503755-186505556:+|nuORF', 'ENST00000475653.5_1_3:186502413-186505086:+|nuORF', 'ENST00000429589.5_1_3:186502413-186505273:+|nuORF', 'ENST00000466362.1_1_3:186502860-186504086:+|nuORF', 'ENST00000495049.5_1_3:186502413-186503854:+|nuORF'] 85312 7144 QLAIAKDEAEK True NCI_RA007_Epitope_Rep1 1214.65066672514 1214.6495699358602 31.779 2 -0.45448588256097333 0.12444099431290818 0.9438714419765777 ['ENSG00000109689|ENST00000467087|STIM2', 'nc|ENSG00000109689|Q9P246-3|STIM2'] 13626 8462 DPTLSLWTP True H1975_Epitope_Rep3 1028.51786165044 1028.51676993586 37.533 2 -0.4545735155133928 0.1244684441444482 0.9438714419765777 ['nc|ENSG00000146904|P21709-2|EPHA1'] 9402 6420 AVVGVVAGGGR True PC9_epitope_Rep2 940.5454138109598 940.54430993586 30.103 2 -0.4545998322940783 0.1244684441444482 0.9438714419765777 ['ENSG00000161016|ENST00000528957|RPL8'] 42709 18985 IEYFWRIAWRF True NCI_RA007_Epitope_Rep2 1585.8194038160898 1585.81830993586 78.699 2 -0.45462979217823735 0.1244684441444482 0.9438714419765777 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 4295 2710 AIKCNQKNYKK True NCI_RA007_Epitope_Rep2 1336.7285402063596 1336.72690490379 14.769 3 -0.45463427525246375 0.12450009280977371 0.9438714419765777 ['L1MDa_dup2979|chr7:144182489-144183245:+|1.2047758210331163|0.1455468842828891|3.05|495.0|3|1|sense'] 65051 20581 LSDKYTATL True PC9_epitope_Rep5 1010.5284263341399 1010.5273299358599 84.212 2 -0.4546418589933683 0.12451276513170106 0.9438714419765777 ['WDR72|p.L895Cfs*7|1|0.3|ENSG00000166415|chr15:53615522-53615522|A/-|frameshift_variant', 'ENSG00000166415|ENST00000360509|WDR72'] 112649 15973 TPESWMVESV True PC9_epitope_Rep2 1163.51687567427 1163.5157699358601 66.693 2 -0.4547181441920287 0.12451276513170106 0.9438714419765777 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 90365 23819 RIKAITTC True NCI_RA007_Epitope_Rep3 904.5164221818001 904.51587496793 103.22 1 -0.45474113656261766 0.12452543659832954 0.9438714419765777 ['ENSG00000187105|ENST00000553558|HEATR4'] 48730 7618 KENSGAQLHV True PC9_epitope_Rep5 1081.5516213902101 1081.5505299358601 34.25 2 -0.45475134406206463 0.12452543659832954 0.9438714419765777 ['ENSG00000077514|ENST00000263681|POLD3', 'nc|ENSG00000077514|Q15054-2|POLD3'] 58211 4948 LESRFEKMYEK True NCI_RA007_Epitope_Rep2 1458.71770073914 1458.71605490379 23.867 3 -0.4547759549982174 0.12454020855127729 0.9438714419765777 ['ENSG00000174231|ENST00000304992|PRPF8'] 12108 15823 DIGAIGPVGAP True PC9_epitope_Rep3 965.5181960036099 965.51708993586 66.018 2 -0.45480130807297336 0.12456554749451662 0.9438714419765777 ['COL22A1|p.P1254Lfs*174|1|0.29|ENSG00000169436|chr8:138623742-138623742|G/-|frameshift_variant', 'nc|ENSG00000169436|Q8NFW1-2|COL22A1', 'COL22A1|p.G1545Vfs*79|1|0.59|ENSG00000169436|chr8:138591488-138591488|G/-|frameshift_variant', 'ENSG00000169436|ENST00000303045|COL22A1'] 18415 11392 EKERDFYFG True PC9_epitope_Rep4 1189.5403880001697 1189.53874490379 51.59 3 -0.45481109910894657 0.12456554749451662 0.9438714419765777 ['ENSG00000101367|ENST00000375571|MAPRE1', 'ENST00000588085.1_1_18:32711911-32720330:+|nuORF', 'nc|ENSG00000166974|Q15555-4|MAPRE2', 'nc|ENSG00000166974|Q15555-5|MAPRE2', 'nc|ENSG00000166974|Q15555-3|MAPRE2', 'ENSG00000166974|ENST00000300249|MAPRE2'] 122364 6979 VGSDVRDWCSP True H1975_Epitope_Rep2 1219.5291716934698 1219.52752490379 31.766 3 -0.4548377557778619 0.12456554749451662 0.9438714419765777 ['nc|ENSG00000162066|Q9Y303-3|AMDHD2'] 8771 9044 AVEGRLRR True H1975_Epitope_Rep1 955.5675462378699 955.56644993586 39.694 2 -0.4548561060696952 0.12456554749451662 0.9438714419765777 ['nc|ENSG00000289701|Q9H257-2|CARD9', 'ENSG00000187796|ENST00000371732|CARD9', 'ENST00000485975.1_1_9:139261944-139262364:-|nuORF', 'ENST00000481053.5_1_9:139259475-139262364:-|nuORF', 'ENST00000489932.2_1_9:139258756-139262364:-|nuORF'] 102977 14481 SQIREMETL True PC9_epitope_Rep2 1105.54375912845 1105.5426699358602 60.97 2 -0.45486934950885366 0.12458031752459044 0.9438714419765777 ['ENSG00000157456|ENST00000288207|CCNB2'] 26883 25340 FLFLRRRCFLL True PC9_epitope_Rep5 1482.8645801866999 1482.8634899358601 102.67 2 -0.45493387073576586 0.12461195842893778 0.9438714419765777 ['ENST00000463422.5_1_2:85981774-86000028:+|nuORF', 'nc|ENSG00000168874|Q96SQ7-2|ATOH8'] 140753 22386 YYQSNEFI True PC9_epitope_Rep3 1062.46582607758 1062.46472993586 91.385 2 -0.4549695016680524 0.12464359826565215 0.9438714419765777 ['PTPRZ1|p.L2100Pfs*15|1|0.25|ENSG00000106278|chr7:122053952-122053953|-/T|frameshift_variant', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'nc|ENSG00000106278|P23471-3|PTPRZ1'] 57002 9270 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 40.601 2 -0.45501160579754196 0.12465836623139993 0.9438714419765777 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 99596 13317 SLFLHESPL True PC9_epitope_Rep5 1041.54949613189 1041.54838993586 56.236 2 -0.45503757556694924 0.12467313369886124 0.9438714419765777 ['LRRC73|p.G94E|1|0.17|ENSG00000204052|chr6:43508912-43508912|C/T|missense_variant'] 31179 16363 GDFGSATF True PC9_epitope_Rep1 800.33408363204 800.3335349679301 67.76 1 -0.45512711522666277 0.12468159044518295 0.9438714419765777 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF'] 118310 10962 VDDNSHEEELK True NCI_RA007_Epitope_Rep2 1313.57353860325 1313.57244993586 47.248 2 -0.4551337587934091 0.12468159044518295 0.9438714419765777 ['GALNT17|p.D195H|1|0.48|ENSG00000185274|chr7:71388395-71388395|G/C|missense_variant'] 134063 18824 WQLLASTCTS True PC9_epitope_Rep5 1108.52229540788 1108.52118993586 77.421 2 -0.45516034318524345 0.12468159044518295 0.9438714419765777 ['ENST00000371019.3_1_10:99093242-99093407:-|nuORF'] 95723 3615 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 19.022 2 -0.4551856843163942 0.12468159044518295 0.9438714419765777 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 82686 10227 PVNTAQGNLKI True PC9_epitope_Rep5 1153.64552177505 1153.64386490379 44.327 3 -0.4552022496708447 0.12469635627530365 0.9438714419765777 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant', 'HMCN1|p.E3102Vfs*9|1|0.2|ENSG00000143341|chr1:186087585-186087586|AG/-|frameshift_variant', 'HMCN1|p.G1946Efs*22|1|0.29|ENSG00000143341|chr1:186038020-186038020|G/-|frameshift_variant', 'HMCN1-IGLL5|1|fusion'] 31454 4678 GEEALKTPP True H1975_Epitope_Rep3 940.48656152216 940.48546993586 23.118 2 -0.45523134083156214 0.12469850051444667 0.9438714419765777 ['nc|ENSG00000170011|Q8NFW9-4|MYRIP', 'nc|ENSG00000170011|Q8NFW9-3|MYRIP', 'nc|ENSG00000170011|Q8NFW9-6|MYRIP', 'ENSG00000170011|ENST00000302541|MYRIP', 'nc|ENSG00000170011|Q8NFW9-5|MYRIP', 'nc|ENSG00000170011|Q8NFW9-2|MYRIP'] 121211 14853 VGGPEIEVG True PC9_epitope_Rep3 855.4337976733099 855.43270993586 62.268 2 -0.4552365063314712 0.12469850051444667 0.9438714419765777 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 19505 15267 ELQKLVPKNDS True H1975_Epitope_Rep1 1269.6928658902898 1269.69176993586 63.992 2 -0.455240810289154 0.12469850051444667 0.9438714419765777 ['ENSG00000198912|ENST00000361605|C1orf174', 'ENST00000486765.5_1_1:3806526-3811957:-|nuORF'] 128394 9597 VSDSMRTASL True PC9_epitope_Rep1 1065.51245900017 1065.51136993586 41.77 2 -0.4552483809542249 0.12469850051444667 0.9438714419765777 ['ENSG00000177311|ENST00000321464|ZBTB38'] 16297 6154 EEIQEVRSKSD True NCI_RA007_Epitope_Rep1 1318.6364732129798 1318.6353699358601 27.975 2 -0.45527391071142664 0.12469850051444667 0.9438714419765777 ['nc|ENSG00000131828|P08559-3|PDHA1', 'PDHA2|p.R312S|1|0.25|ENSG00000163114|chr4:95841086-95841086|G/T|missense_variant', 'ENSG00000131828|ENST00000422285|PDHA1', 'nc|ENSG00000131828|P08559-2|PDHA1', 'nc|ENSG00000131828|P08559-4|PDHA1'] 76973 11014 NVQKIILE True PC9_epitope_Rep6 955.5702315764698 955.56912993586 53.263 2 -0.45528494033413547 0.12469850051444667 0.9438714419765777 ['nc|nan|Q96LT7-2|C9orf72', 'ENST00000488117.5_1_9:27560206-27567121:-|nuORF', 'ENSG00000147894|ENST00000380003|C9orf72'] 20775 6415 EQLRELSRDRE True H1975_Epitope_Rep1 1429.72735390605 1429.72570490379 29.734 3 -0.4552927875032607 0.12469850051444667 0.9438714419765777 ['GPA33|p.E294D|1|0.23|ENSG00000143167|chr1:167054412-167054412|C/A|missense_variant'] 41903 17776 IDYTVMVF True PC9_epitope_Rep3 986.47830533758 986.47720993586 73.576 2 -0.455352295128427 0.12473013088652003 0.9438714419765777 ['ENSG00000137996|ENST00000370128|RTCA', 'nc|ENSG00000137996|O00442-2|RTCA'] 139997 6726 YVKMYENQQLG True H1975_Epitope_Rep1 1371.6492868261498 1371.64818993586 30.915 2 -0.4554042979591436 0.12473858193348175 0.9438714419765777 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B', 'ENST00000593411.1_1_19:17213013-17214246:+|nuORF'] 59504 21825 LGPLSLLSL True PC9_epitope_Rep2 911.56916894731 911.56806993586 89.424 2 -0.4554048950194002 0.12473858193348175 0.9438714419765777 ['ENST00000368198.7_1_1:156776099-156776195:-|nuORF'] 124737 5100 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 26.314 3 -0.45540946262073256 0.12473858193348175 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 90586 23016 RKIFRLIKK True H1975_Epitope_Rep2 1200.8182816172796 1200.8171899358601 94.982 2 -0.4554298590797177 0.12473858193348175 0.9438714419765777 ['ENST00000392859.7_1_11:118471445-118471652:+|nuORF'] 48914 7066 KEVKLSVP True H1975_Epitope_Rep2 898.5487678558999 898.54766993586 32.108 2 -0.4554357185515737 0.1247702089622721 0.9438714419765777 ['nc|ENSG00000116701|P19878-2|NCF2', 'nc|ENSG00000116701|P19878-4|NCF2', 'nc|ENSG00000116701|P19878-3|NCF2', 'ENSG00000116701|ENST00000367535|NCF2'] 92930 17601 RRPLAAAA True NCI_RA007_Epitope_Rep5 824.4980696957198 824.49696993586 74.482 2 -0.4555524351114727 0.12479552085265697 0.9438714419765777 ['ENSG00000181867|ENST00000321339|FTMT'] 80836 21260 PLTSLALHL True PC9_epitope_Rep5 963.57531695691 963.57420993586 86.827 2 -0.4555551864560976 0.12479552085265697 0.9438714419765777 ['ENST00000372336.3_1_10:81145469-81145733:-|nuORF'] 12851 10595 DLLDYHRRQR True NCI_RA007_Epitope_Rep2 1370.7167296527 1370.71562993586 45.811 2 -0.4555669055339283 0.12479552085265697 0.9438714419765777 ['PHLDB1|p.E591D|1|0.34|ENSG00000019144|chr11:118628596-118628596|G/T|missense_variant'] 68094 8709 LTPDGALAP True H1975_Epitope_Rep3 853.4545331178899 853.45342993586 38.498 2 -0.4555794819151643 0.12479552085265697 0.9438714419765777 ['nc|ENSG00000275395|Q9Y6R7|FCGBP', 'ENSG00000275395|ENST00000616721|FCGBP'] 26913 17080 FLGMHPDLS True PC9_epitope_Rep5 1015.47970231991 1015.47860993586 70.717 2 -0.4555857764996142 0.12481028027926742 0.9438714419765777 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1'] 55487 14220 LAVKEKEL True PC9_epitope_Rep4 928.5593325395998 928.55822993586 62.605 2 -0.4557211908888909 0.1248566610455312 0.9438714419765777 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 101286 5853 SLWTSRMMTKA True NCI_RA007_Epitope_Rep1 1310.6475130043402 1310.64586490379 26.819 3 -0.4557479697018574 0.1248566610455312 0.9438714419765777 ['ENST00000304543.9_1_X:24197821-24197881:+|nuORF'] 74965 20336 NLVLFYQCLML True PC9_epitope_Rep6 1355.69815159487 1355.69650490379 90.924 3 -0.4557916457978562 0.12490514493853393 0.9438714419765777 ['chr1:103745515-103750424|173|21.9|0.0|21.06|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|25', 'chr1:103745227-103750424|306|24.34|0.0|21.21|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|25', 'chr1:103651377-103750424|112|20.44|0.0|20.96|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|25', 'chr1:103651250-103750424|129|11.88|0.0|20.18|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|25', 'chr1:103651089-103750424|267|25.88|0.0|21.3|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|25'] 4230 6482 AIFLKWHVP True H1975_Epitope_Rep3 1109.63858591981 1109.63748993586 29.901 2 -0.4558698401205587 0.12498735287174126 0.9438714419765777 ['ENSG00000182450|ENST00000422670|KCNK4', 'nc|ENSG00000182450|Q9NYG8-2|KCNK4'] 674 5318 AAVAPAPAP True H1975_Epitope_Rep3 763.42283906679 763.42174993586 25.531 2 -0.45588678294134893 0.125002107819166 0.9438714419765777 ['ENSG00000121671|ENST00000616080|CRY2'] 133685 16170 WKYELRIRYLP True PC9_epitope_Rep1 1535.8612686280696 1535.85905987172 67.013 4 -0.455911579713879 0.12501264627525038 0.9438714419765777 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 52778 12074 KQQQQLVL True NCI_RA007_Epitope_Rep4 983.5763795860697 983.57528993586 53.441 2 -0.4559259626569072 0.12501264627525038 0.9438714419765777 ['ENST00000393077.2_1_10:114575138-114575192:+|nuORF'] 33118 9317 GKLVINGNL True PC9_epitope_Rep2 926.5549158655 926.55380993586 41.176 2 -0.45593416108952095 0.12501264627525038 0.9438714419765777 ['ENST00000447061.2_1_2:38512560-38513046:+|nuORF'] 22858 9673 EVENWLDP True NCI_RA007_Epitope_Rep1 1000.4501760134399 1000.44906993586 41.625 2 -0.45595784358645053 0.12502739980103528 0.9438714419765777 ['nc|ENSG00000088367|Q9H4G0-3|EPB41L1'] 107194 19017 SYPAFWTSF True NCI_RA007_Epitope_Rep4 1104.4916469026 1104.49107496793 82.262 1 -0.45599301883195087 0.1250421528292979 0.9438714419765777 ['ENST00000299505.6_1_19:34791118-34791184:+|nuORF'] 46619 10210 ITTGQAAP True PC9_epitope_Rep4 757.3970182417698 757.39592993586 46.95 2 -0.4560425615631767 0.1250569053600634 0.9438714419765777 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 2265 8678 AEPFPFRRPER True NCI_RA007_Epitope_Rep2 1400.7313170876798 1400.72968490379 38.402 3 -0.45609777318511197 0.12507165739335693 0.9438714419765777 ['ENSG00000170379|ENST00000684770|TCAF2', 'nc|ENSG00000170379|A6NFQ2-3|TCAF2', 'nc|ENSG00000170379|A6NFQ2-2|TCAF2', 'ENSG00000283528|ENST00000636941|TCAF2C'] 3108 5314 AGAREGVSVQY True H1975_Epitope_Rep2 1135.56218607391 1135.56108993586 25.491 2 -0.45614533139601326 0.125084299973024 0.9438714419765777 ['ENST00000311177.6_1_17:46700370-46700481:-|nuORF'] 54506 8986 LAADPSHP True PC9_epitope_Rep3 806.3922672145 806.39116993586 39.51 2 -0.45616053340333995 0.125084299973024 0.9438714419765777 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 62879 22559 LMRFRKPWPLR True PC9_epitope_Rep6 1498.8707281962998 1498.86962993586 99.789 2 -0.4561750926075356 0.12509694170010452 0.9438714419765777 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 48457 4785 KEEIVFRYYH True H1975_Epitope_Rep3 1382.6982856239 1382.69665490379 23.531 3 -0.45618472485588935 0.12509694170010452 0.9438714419765777 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF', 'nc|ENSG00000160593|Q86YT9-4|JAML', 'JAML|p.A177P|1|0.27|ENSG00000160593|chr11:118205887-118205887|C/G|missense_variant'] 62670 10074 LLWEKFVP True NCI_RA007_Epitope_Rep3 1030.5851533646198 1030.58404993586 46.719 2 -0.4562950213829688 0.12515804912588296 0.9438714419765777 ['LIMK2|p.F563L|1|0.09|ENSG00000182541|chr22:31275225-31275225|C/G|missense_variant'] 28339 13105 FSASTEII True H1975_Epitope_Rep3 866.43854870058 866.43800496793 55.653 1 -0.45632664698152836 0.12515804912588296 0.9438714419765777 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|212|1|anti-sense'] 19144 13764 ELIRQAALQ True PC9_epitope_Rep1 1040.59784330664 1040.59727496793 57.788 1 -0.45634209798910047 0.12515804912588296 0.9438714419765777 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 27127 6606 FLQVTATDA True NCI_RA007_Epitope_Rep5 964.48656152216 964.48546993586 32.068 2 -0.45638677039747383 0.1251727974645133 0.9438714419765777 ['ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant'] 137044 12787 YKVEQKVFL True PC9_epitope_Rep6 1152.6542955536 1152.65263490379 60.683 3 -0.4564858271135244 0.1251875453058885 0.9438714419765777 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-3|ADGRL3'] 9945 9128 AYQSRLSM-[Oxidation] True H1975_Epitope_Rep1 970.4542162285 970.4536649679301 40.016 1 -0.4564986462419484 0.1252001820603159 0.9438714419765777 ['ENSG00000187003|ENST00000333999|ACTL7A'] 66439 18810 LSRPAVQLL True PC9_epitope_Rep1 995.6127650947899 995.61166993586 77.14 2 -0.4565272688055248 0.1252001820603159 0.9438714419765777 ['nc|ENSG00000104951|Q96RQ9-2|IL4I1', 'ENSG00000104951|ENST00000391826|IL4I1'] 124537 15058 VLGCNNFRVI True PC9_epitope_Rep1 1133.60154878809 1133.59990490379 62.738 3 -0.4565463035020137 0.12521492869424497 0.9438714419765777 ['ENSG00000116984|ENST00000366577|MTR', 'nc|ENSG00000116984|Q99707-2|MTR'] 98466 13308 SIKLTCTLS True PC9_epitope_Rep1 964.52631815916 964.52522993586 56.052 2 -0.456589452747521 0.12524653169934089 0.9438714419765777 ['nc|ENSG00000211672|A0A075B6K6|IGLV4-3'] 86699 10065 QRIDEFESM-[Oxidation] True PC9_epitope_Rep5 1169.5022886197298 1169.50118993586 43.695 2 -0.45668004314241917 0.1252781336389994 0.9438714419765777 ['ENSG00000147065|ENST00000360270|MSN', 'ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 99286 11078 SLDFYSMVYP True NCI_RA007_Epitope_Rep1 1220.5423621461198 1220.54126993586 47.088 2 -0.45680365482762164 0.12532447830630752 0.9438714419765777 ['ENST00000556803.1_1_14:23820757-23821058:-|nuORF'] 55987 14312 LDIIFTWYFNG True H1975_Epitope_Rep1 1387.68123857743 1387.68014993586 60.238 2 -0.4568453555051476 0.12532447830630752 0.9438714419765777 ['CNTN3|p.D607Gfs*2|1|0.44|ENSG00000113805|chr3:74301772-74301773|-/C|frameshift_variant', 'ENSG00000113805|ENST00000263665|CNTN3'] 88024 9237 QVSQIYQSI True PC9_epitope_Rep5 1064.55022440788 1064.54912993586 40.478 2 -0.456888580110375 0.12533288386988034 0.9438714419765777 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF', 'ENST00000462527.2_1_10:120819077-120819266:-|nuORF'] 133279 19083 WEKFFMVTFIT True H1975_Epitope_Rep2 1447.7209952144294 1447.71988993586 79.214 2 -0.4569025555648555 0.12533288386988034 0.9438714419765777 ['nc|ENSG00000140090|Q8NFF2-3|SLC24A4', 'ENSG00000140090|ENST00000532405|SLC24A4', 'ENST00000526482.1_1_14:92920194-92959969:+|nuORF', 'nc|ENSG00000140090|Q8NFF2-4|SLC24A4', 'nc|ENSG00000140090|Q8NFF2-2|SLC24A4'] 139246 16390 YTCERNDQL True PC9_epitope_Rep3 1140.48697252832 1140.4858699358601 68.182 2 -0.45691512402376405 0.12533288386988034 0.9438714419765777 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 55007 15309 LAKKNIRKRG True NCI_RA007_Epitope_Rep4 1182.7673086735797 1182.7662099358602 66.54 2 -0.4569465736203066 0.12533288386988034 0.9438714419765777 ['nc|ENSG00000076344|O94810-3|RGS11', 'nc|ENSG00000076344|O94810-2|RGS11', 'ENSG00000076344|ENST00000397770|RGS11', 'ENST00000493449.5_1_16:322367-324481:-|nuORF'] 8516 5558 ATVPNNKI True PC9_epitope_Rep3 855.48141657207 855.48030993586 26.458 2 -0.45698680685898335 0.1253455133823232 0.9438714419765777 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000544151.1_1_12:21807353-21810687:-|nuORF'] 28967 21653 FTFGAEVVA True PC9_epitope_Rep2 939.4701831820298 939.46963496793 88.764 1 -0.45699063085487684 0.1253455133823232 0.9438714419765777 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'nc|ENSG00000172531|P62136-3|PPP1CA', 'ENST00000532279.1_1_11:67166350-67167062:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC'] 83161 19527 PYSPPFFIL True PC9_epitope_Rep1 1079.56916894731 1079.5680699358602 79.931 2 -0.45702859131484297 0.1253518041019937 0.9438714419765777 ['FAM53C|p.S195I|1|0.86|ENSG00000120709|chr5:138345272-138345272|G/T|missense_variant'] 54504 8153 LAADPSHP True PC9_epitope_Rep2 806.3922672145 806.39116993586 36.717 2 -0.4570352244264314 0.1253518041019937 0.9438714419765777 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 125936 21027 VPAAAFSDVL True PC9_epitope_Rep3 988.5229470308799 988.52184993586 86.158 2 -0.4570689537334221 0.1253518041019937 0.9438714419765777 ['ENSG00000174282|ENST00000380599|ZBTB4'] 20101 12179 ENIQDILAQNL True NCI_RA007_Epitope_Rep1 1269.6564803815697 1269.65538993586 51.34 2 -0.4570856058645258 0.1253518041019937 0.9438714419765777 ['nc|ENSG00000154258|Q8IUA7-4|ABCA9', 'nc|ENSG00000154258|Q8IUA7-3|ABCA9', 'ENSG00000154258|ENST00000340001|ABCA9', 'ABCA9|p.G692Vfs*13|1|0.6|ENSG00000154258|chr17:69026443-69026444|-/A|frameshift_variant'] 29676 20023 FVNDIFERI True PC9_epitope_Rep4 1151.59750895347 1151.59640993586 85.155 2 -0.45709336476394713 0.1253518041019937 0.9438714419765777 ['ENSG00000185130|ENST00000377401|H2BC13', 'ENSG00000273703|ENST00000621112|H2BC14', 'ENSG00000158373|ENST00000377777|H2BC5', 'ENSG00000197903|ENST00000356950|H2BC12', 'ENSG00000203814|ENST00000369167|H2BC18', 'ENSG00000233822|ENST00000612898|H2BC15', 'ENSG00000278588|ENST00000377733|H2BC10', 'ENSG00000234289|ENST00000599962|H2BC12L', 'ENSG00000273802|ENST00000541790|H2BC8', 'ENSG00000275713|ENST00000619466|H2BC9', 'ENSG00000277224|ENST00000356530|H2BC7', 'ENST00000469483.1_1_1:149775510-149783878:-|nuORF', 'nc|ENSG00000203814|Q5QNW6-2|H2BC18', 'ENSG00000274290|ENST00000614097|H2BC6', 'ENSG00000180596|ENST00000396984|H2BC4', 'H2BC8|p.G76A|1|0.27|ENSG00000273802|chr6:26216417-26216417|C/G|missense_variant', 'H2BC4|p.S65F|1|0.04|ENSG00000278588|chr6:26123711-26123711|G/A|missense_variant', 'H2BC14|p.S65C|1|0.48|ENSG00000273703|chr6:27815237-27815237|C/G|missense_variant', 'ENSG00000276410|ENST00000615966|H2BC3', 'ENSG00000274641|ENST00000616182|H2BC17', 'ENSG00000184678|ENST00000369155|H2BC21', 'ENSG00000124635|ENST00000339812|H2BC11', 'ENST00000436555.1_1_1:228651947-228652295:-|nuORF', 'ENSG00000196890|ENST00000693095|H2BC26'] 82332 13401 PTSAFSQFQ True PC9_epitope_Rep4 1011.4661604307498 1011.46557496793 59.448 1 -0.4571836941353754 0.12536654420438842 0.9438714419765777 ['ENSG00000173546|ENST00000308508|CSPG4'] 89535 3490 RERPPEEVAA True NCI_RA007_Epitope_Rep4 1152.58873517492 1152.5870849037901 19.377 3 -0.45723657724350397 0.12537917087967643 0.9438714419765777 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 84314 9356 QFKSEVESL True PC9_epitope_Rep4 1065.5342399905699 1065.5331499358601 43.598 2 -0.4572428300159425 0.12537917087967643 0.9438714419765777 ['CNOT3|p.E143K|1|0.13|ENSG00000088038|chr19:54144276-54144276|G/A|missense_variant'] 106632 17816 SWRWMWRAWCL True PC9_epitope_Rep5 1579.73291439415 1579.7312549037902 73.548 3 -0.4573836087601835 0.12542761328592372 0.9438714419765777 ['nc|ENSG00000213347|Q9BW11-4|MXD3'] 107572 18226 TAEKLIDLL True PC9_epitope_Rep3 1014.5961119711399 1014.59500993586 75.319 2 -0.4574266907870859 0.12545497438662712 0.9438714419765777 ['ENST00000427378.1_1_7:134813580-134814228:+|nuORF'] 76819 7968 NVENKYSL True H1975_Epitope_Rep3 965.4818104948899 965.48070993586 35.62 2 -0.457439385428331 0.12545497438662712 0.9438714419765777 ['ENSG00000163293|ENST00000295461|NIPAL1'] 9018 13006 AVIEAEKIAQV True PC9_epitope_Rep6 1169.66558851329 1169.66448993586 61.609 2 -0.45743968309560623 0.12545497438662712 0.9438714419765777 ['ENSG00000107566|ENST00000421367|ERLIN1'] 91323 3795 RMHRYQIWT True H1975_Epitope_Rep1 1289.6451449355698 1289.64349490379 19.179 3 -0.4574848700147593 0.12548444714049808 0.9438714419765777 ['CON__Q32PI4'] 651 8468 AATLSNGGFCP True H1975_Epitope_Rep2 1036.4647805317597 1036.4636899358602 37.524 2 -0.4575190172724669 0.12548444714049808 0.9438714419765777 ['GLS|p.A435S|1|0.21|ENSG00000115419|chr2:190927360-190927360|G/T|missense_variant'] 129981 10187 VTPDPQRRP True NCI_RA007_Epitope_Rep1 1064.57269118796 1064.5715899358602 43.636 2 -0.45757039718292586 0.12548861032484163 0.9438714419765777 ['ENST00000272427.10_1_2:72406343-72406460:-|nuORF'] 13455 4454 DPACYEFLWGP True H1975_Epitope_Rep3 1296.5485101557197 1296.54740993586 22.256 2 -0.4575858956875429 0.12548861032484163 0.9438714419765777 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|245|11.93|0.02|9.4|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3', 'chrX:152751574-152753788|174|17.34|0.02|9.87|-|ENST00000611674|MAGEA2,MAGEA2', 'chrX:152751822-152752394|202|24.98|0.06|8.82|-|ENST00000623806|MAGEA2,MAGEA2', 'ENSG00000268606|ENST00000684311|MAGEA2', 'ENSG00000183305|ENST00000682532|MAGEA2B', 'chrX:152753623-152753788|178|10.09|0.02|9.31|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152753391-152753542|175|16.75|0.02|9.45|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152752513-152753788|203|29.14|0.06|8.98|-|ENST00000620710|MAGEA2,MAGEA2', 'chrX:152753391-152753788|192|21.18|0.03|9.4|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152751725|206|35.77|0.07|9.03|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152752394|220|50.13|0.12|8.73|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152751428-152751509|251|75.14|0.18|8.7|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152714682-152716896|187|20.44|0.02|9.74|+|ENST00000370293|MAGEA2B,MAGEA2B', 'chrX:152752513-152753313|204|33.18|0.07|8.98|-|ENST00000623806|MAGEA2,MAGEA2', 'nc|ENSG00000185247|P43364-2|MAGEA11', 'ENST00000518694.1_1_X:148796119-148798433:+|nuORF', 'ENSG00000213401|ENST00000393869|MAGEA12', 'chrX:152733859-152736087|169|48.7|0.12|8.66|+|ENST00000357916|MAGEA12,MAGEA12', 'ENSG00000185247|ENST00000355220|MAGEA11'] 55242 13341 LAQEGVIDQ True PC9_epitope_Rep6 971.49237517859 971.49126993586 62.975 2 -0.457680922468812 0.12548861032484163 0.9438714419765777 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5', 'ENST00000373903.1_1_9:123586619-123589169:-|nuORF', 'ENST00000496688.1_1_9:123589031-123593637:-|nuORF'] 62510 22698 LLSSQLVTL True PC9_epitope_Rep1 972.58554728744 972.58499496793 92.112 1 -0.4576833136892133 0.12548861032484163 0.9438714419765777 ['ENST00000414287.5_1_22:49808404-49808650:-|nuORF'] 82714 9139 PVPPRTGPPRL True NCI_RA007_Epitope_Rep4 1185.6982260542497 1185.6965849037902 41.992 3 -0.45769166995484345 0.12548861032484163 0.9438714419765777 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1'] 2933 12634 AFFREEDYIR True NCI_RA007_Epitope_Rep1 1344.6462500510397 1344.6451499358602 53.125 2 -0.4577192267074759 0.12548861032484163 0.9438714419765777 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant'] 2320 4046 AEQAERYDEM-[Oxidation] True H1975_Epitope_Rep2 1256.49793151528 1256.4968299358602 20.642 2 -0.45773570474364816 0.12550122990868348 0.9438714419765777 ['ENSG00000108953|ENST00000264335|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 13018 15047 DLQQQIMT True PC9_epitope_Rep5 975.46953155903 975.46842993586 62.883 2 -0.4577728307565708 0.12550122990868348 0.9438714419765777 ['nc|ENSG00000137343|Q5SQI0-7|ATAT1', 'nc|ENSG00000137343|Q5SQI0-6|ATAT1', 'nc|ENSG00000137343|Q5SQI0-5|ATAT1', 'nc|ENSG00000137343|Q5SQI0-4|ATAT1', 'nc|ENSG00000137343|Q5SQI0-3|ATAT1', 'ENSG00000137343|ENST00000330083|ATAT1', 'nc|ENSG00000137343|Q5SQI0|ATAT1', 'ENST00000493388.5_1_6:30594710-30608409:+|nuORF', 'ENST00000468713.5_1_6:30594689-30613691:+|nuORF'] 63387 4464 LPFWRYSCCWR True H1975_Epitope_Rep3 1515.6903808758298 1515.6892899358602 22.29 2 -0.4578506719429035 0.12551596327183895 0.9438714419765777 ['ENST00000591087.1_1_19:46144824-46145007:+|nuORF'] 129243 5256 VTDNGLQK True NCI_RA007_Epitope_Rep4 873.4555957470501 873.45448993586 26.761 2 -0.45794613047479543 0.12554542850885322 0.9438714419765777 ['ENSG00000159399|ENST00000290573|HK2', 'HK2|p.L795Rfs*10|1|0.41|ENSG00000159399|chr2:74889253-74889262|TGGCCCTGCT/-|frameshift_variant', 'ENST00000472302.1_1_2:75081464-75094914:+|nuORF', 'HK2|p.K323Sfs*34|1|0.23|ENSG00000159399|chr2:74877251-74877251|G/-|frameshift_variant'] 99280 17489 SLDERVVSI True PC9_epitope_Rep3 1016.5502244078799 1016.54912993586 72.448 2 -0.45795290159988095 0.12554542850885322 0.9438714419765777 ['TMEM132D|p.K741R|1|0.26|ENSG00000151952|chr12:129074953-129074953|T/C|missense_variant'] 46607 6075 ITSSLTSEEK True NCI_RA007_Epitope_Rep4 1093.5502839775302 1093.54918993586 29.984 2 -0.45797852061591976 0.12558750694900692 0.9438714419765777 ['ENSG00000175820|ENST00000322527|CCDC168'] 39905 14212 HQLESILAM-[Oxidation] True PC9_epitope_Rep1 1056.5273811687598 1056.5262899358602 59.489 2 -0.45798037057637764 0.12558750694900692 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 15763 9627 EDELKEFHMK True NCI_RA007_Epitope_Rep2 1304.607087661 1304.6059899358602 42.062 2 -0.4579993479133473 0.12558750694900692 0.9438714419765777 ['ENSG00000159592|ENST00000355105|GPBP1L1', 'ENST00000487436.1_1_1:46093930-46096305:-|nuORF'] 4471 4930 AKFSRPAQL True NCI_RA007_Epitope_Rep5 1016.5767139392399 1016.57560993586 25.664 2 -0.4580156215912737 0.12558750694900692 0.9438714419765777 ['nc|ENSG00000130985|P22314-2|UBA1', 'ENSG00000130985|ENST00000335972|UBA1'] 19761 14400 ELSVPQNMSL True PC9_epitope_Rep1 1116.5485101557201 1116.54740993586 60.213 2 -0.4580217056473765 0.12559377421419668 0.9438714419765777 ['STAP1|p.V128M|1|0.46|ENSG00000035720|chr4:67581323-67581323|G/A|missense_variant'] 129917 12364 VTLTSLDI True PC9_epitope_Rep1 860.485498893 860.48440993586 52.417 2 -0.4580425792614881 0.12559377421419668 0.9438714419765777 ['ENSG00000175224|ENST00000683050|ATG13', 'nc|ENSG00000175224|O75143-4|ATG13', 'nc|ENSG00000175224|O75143-3|ATG13', 'nc|ENSG00000175224|O75143-2|ATG13', 'nc|ENSG00000175224|O75143|ATG13'] 23074 19845 EVLFVKDLTL True PC9_epitope_Rep6 1175.6801759482698 1175.67906993586 88.994 2 -0.4580527002008934 0.12559377421419668 0.9438714419765777 ['ENSG00000249715|ENST00000624922|FER1L5', 'ENST00000505256.6_1_2:97312155-97317763:+|nuORF'] 1430 6607 AEEGRGETA True H1975_Epitope_Rep2 918.4042884501799 918.4037349679301 30.325 1 -0.45807243344835097 0.12559377421419668 0.9438714419765777 ['ENSG00000179922|ENST00000325351|ZNF784', 'ENST00000591479.1_1_19:56133119-56135920:-|nuORF'] 3171 12438 AGEGGSSTQLL True PC9_epitope_Rep3 1018.49310345458 1018.49200993586 52.868 2 -0.45809592985856107 0.12559377421419668 0.9438714419765777 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 66234 12785 LSPTLETEET True PC9_epitope_Rep5 1118.53429956022 1118.5332099358602 54.189 2 -0.45810562238730174 0.1256063872793424 0.9438714419765777 ['ENSG00000120318|ENST00000239440|ARAP3'] 46217 4831 ITDNTSSKQD True NCI_RA007_Epitope_Rep1 1107.50439641427 1107.50328993586 22.871 2 -0.45811886280241343 0.1256063872793424 0.9438714419765777 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000433411.7_1_17:18062924-18082138:+|nuORF'] 117608 7144 VAGTVRKCWPN True PC9_epitope_Rep1 1229.6339115455298 1229.63280993586 32.29 2 -0.4581595031898343 0.1256189994946943 0.9438714419765777 ['ENSG00000096717|ENST00000212015|SIRT1'] 55758 6061 LDEDFLLP True NCI_RA007_Epitope_Rep1 960.4804135125598 960.47930993586 27.614 2 -0.4581931041132918 0.1256189994946943 0.9438714419765777 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF'] 116947 11006 TYPIKTPTF True NCI_RA007_Epitope_Rep5 1066.5698972233001 1066.5688099358601 48.969 2 -0.45829199084950817 0.12566318023343945 0.9438714419765777 ['ENSG00000115339|ENST00000392701|GALNT3', 'ENST00000463254.1_1_2:166615181-166618484:-|nuORF'] 62930 4749 LNARYMHK True NCI_RA007_Epitope_Rep2 1031.53346922827 1031.53236993586 23.103 2 -0.4583560275081537 0.12566318023343945 0.9438714419765777 ['ENSG00000174502|ENST00000367135|SLC26A9', 'nc|ENSG00000174502|Q7LBE3-2|SLC26A9'] 134558 5347 WVRRFWPRWGR True NCI_RA007_Epitope_Rep2 1600.8640030230797 1600.86235490379 25.418 3 -0.4583573509594616 0.12566318023343945 0.9438714419765777 ['ENST00000272438.8_1_2:71215398-71215467:-|nuORF'] 85534 14906 QLKQQIQSI True PC9_epitope_Rep6 1084.62405805448 1084.62296993586 69.326 2 -0.4584038835751278 0.12569474854313337 0.9438714419765777 ['ENSG00000100138|ENST00000401959|SNU13'] 101666 2630 SPFRAPPFHP True NCI_RA007_Epitope_Rep3 1151.5876129761098 1151.58595490379 14.805 3 -0.4584188622442512 0.12570947368421054 0.9438714419765777 ['ENST00000573523.5_1_17:4574736-4578861:-|nuORF', 'ENSG00000141456|ENST00000572293|PELP1'] 45352 17915 ISDGANIINL True PC9_epitope_Rep1 1028.55022440788 1028.54912993586 73.703 2 -0.4585197286597447 0.12575788197251414 0.9438714419765777 ['PTCHD4|p.F810Sfs*25|1|0.13|ENSG00000244694|chr6:47878415-47878415|A/-|frameshift_variant', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 38956 16611 HISVGPFPIL True NCI_RA007_Epitope_Rep4 1078.6175161220601 1078.61640993586 72.013 2 -0.45856129103692583 0.12577260555433922 0.9438714419765777 ['SLC26A3|p.G138Dfs*2|1|0.22|ENSG00000091138|chr7:107791205-107791205|C/-|frameshift_variant', 'ENSG00000091138|ENST00000340010|SLC26A3'] 98254 16633 SIEYSIPFPP True PC9_epitope_Rep5 1148.57537652656 1148.57426993586 68.985 2 -0.45871341860991643 0.12580416989457374 0.9438714419765777 ['ENST00000259605.10_1_9:36338912-36339155:-|nuORF'] 37411 9961 GVYSLSAP True PC9_epitope_Rep2 792.40176926904 792.40066993586 43.646 2 -0.45875070991189904 0.12581253578525478 0.9438714419765777 ['ENST00000380325.3_1_20:3028531-3028840:+|nuORF'] 100117 20152 SLLATAILGA True PC9_epitope_Rep4 928.5593325395998 928.55822993586 85.651 2 -0.4588039281326174 0.12581253578525478 0.9438714419765777 ['ENSG00000146802|ENST00000312814|TMEM168'] 126888 15784 VPTSFSAQQI True PC9_epitope_Rep1 1076.55022440788 1076.54912993586 65.53 2 -0.45880636390130586 0.12581253578525478 0.9438714419765777 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant'] 41805 5073 IDRYAQQDLKK True NCI_RA007_Epitope_Rep5 1376.7412130650398 1376.7395549037901 26.214 3 -0.4588259974341045 0.12581253578525478 0.9438714419765777 ['ENST00000468468.5_1_11:864058-866627:+|nuORF', 'ENSG00000214063|ENST00000397397|TSPAN4', 'ENST00000494815.1_1_11:864058-865677:+|nuORF'] 136120 15737 YGFPPDLTLT True NCI_RA007_Epitope_Rep5 1122.5597264624198 1122.5586299358602 67.25 2 -0.45883096177475097 0.12582090054895093 0.9438714419765777 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 140937 9191 YYYRRRHRHER True NCI_RA007_Epitope_Rep1 1690.8665222042198 1690.8654299358602 39.752 2 -0.45888031154149567 0.12582090054895093 0.9438714419765777 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 52118 17188 KLRKVAKMGP True PC9_epitope_Rep6 1126.7008689065399 1126.69976993586 78.703 2 -0.4588987639987812 0.12582090054895093 0.9438714419765777 ['ENSG00000172890|ENST00000319023|NADSYN1', 'ENST00000531236.1_1_11:71196518-71209628:+|nuORF', 'nc|ENSG00000172890|Q6IA69-2|NADSYN1', 'ENST00000530831.1_1_11:71208417-71209628:+|nuORF'] 2969 22211 AFIVFTEAI True NCI_RA007_Epitope_Rep1 1009.54843350273 1009.54732993586 90.982 2 -0.4589092096563535 0.12582090054895093 0.9438714419765777 ['SLC6A19|p.P451Rfs*25|1|0.13|ENSG00000174358|chr5:1219076-1219076|C/-|frameshift_variant', 'ENSG00000174358|ENST00000304460|SLC6A19'] 111928 20465 TLRWRKRWRWR True PC9_epitope_Rep1 1698.9807641108196 1698.97912490379 83.53 3 -0.45893510462185405 0.1258335017175187 0.9438714419765777 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 20185 7750 ENRRPLWTWDP True H1975_Epitope_Rep3 1468.7211463267997 1468.72004993586 34.794 2 -0.4589385419078246 0.1258335017175187 0.9438714419765777 ['ENST00000499638.6_1_12:121660646-121661115:+|nuORF'] 66428 7368 LSRMLAGG True PC9_epitope_Rep6 803.4323582046699 803.43126993586 37.531 2 -0.4589517686428674 0.12584398309508174 0.9438714419765777 ['ENST00000428284.2_1_7:27168486-27168678:-|nuORF'] 43835 5306 ILAGAGLR True NCI_RA007_Epitope_Rep5 769.48102264925 769.47992993586 27.104 2 -0.4589741110517355 0.12584398309508174 0.9438714419765777 ['ENST00000446750.1_3_X:53707646-53710946:-|nuORF', 'ENST00000342160.7_2_X:53707120-53710946:-|nuORF'] 95275 10329 SADRGLVL True PC9_epitope_Rep6 829.46576650793 829.46466993586 50.429 2 -0.4589764191317482 0.12584398309508174 0.9438714419765777 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-7|FCAR'] 74299 11484 NIKEYHDFL True PC9_epitope_Rep5 1177.57677350889 1177.57513490379 49.171 3 -0.45899832793010237 0.1258587015086207 0.9438714419765777 ['ADAM22|p.E420K|1|0.21|ENSG00000008277|chr7:88143063-88143063|G/A|missense_variant'] 46865 8431 IVGIRYEVGP True H1975_Epitope_Rep1 1101.61824439805 1101.6171499358602 37.356 2 -0.45905832684651066 0.12587130013132639 0.9438714419765777 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1'] 109058 19576 TFCSCYILP True PC9_epitope_Rep3 1045.46127537445 1045.4601699358602 80.534 2 -0.4590830314758647 0.12587130013132639 0.9438714419765777 ['ENST00000316407.8_2_3:113371981-113372074:-|nuORF'] 74556 9180 NLCQRRKYQY True H1975_Epitope_Rep3 1370.6877380235399 1370.68664993586 40.301 2 -0.45912190744658293 0.12588601734152707 0.9438714419765777 ['ENST00000342992.10_3_2:179542611-179544107:-|nuORF'] 62057 19987 LLMEELLL True PC9_epitope_Rep6 972.5565556582799 972.55544993586 89.546 2 -0.4591331327661593 0.1259007340561654 0.9438714419765777 ['ENST00000264992.7_1_3:130744435-130745401:-|nuORF', 'ENST00000504725.1_1_3:130745275-130745401:-|nuORF'] 78824 17301 PEPPPPLCLL True NCI_RA007_Epitope_Rep3 1074.5783537320199 1074.5772499358602 75.934 2 -0.4593326366624716 0.12599538712772942 0.9438714419765777 ['ENSG00000139289|ENST00000266671|PHLDA1'] 81118 4316 PPHPPPPPP True H1975_Epitope_Rep3 931.49158733295 931.49048993586 21.718 2 -0.4593584642501946 0.12599538712772942 0.9438714419765777 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 129157 13398 VTDDLVC[Carbamidomethyl]LVYK True H1975_Epitope_Rep3 1323.6744392242601 1323.6733499358602 56.802 2 -0.4593625316965888 0.12599538712772942 0.9438714419765777 ['ENSG00000143742|ENST00000304786|SRP9'] 3132 12367 AGDLSAGF True PC9_epitope_Rep1 736.3391690124799 736.3386249679301 52.428 1 -0.45938710723312626 0.12601010101010102 0.9438714419765777 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 120878 9748 VGDVFRGG True PC9_epitope_Rep3 805.4082516318099 805.40714993586 42.45 2 -0.45947775219878073 0.12607531859733 0.9438714419765777 ['NYAP1|p.V572Cfs*2|3|0.29|ENSG00000166924|chr7:100489429-100489429|G/-|frameshift_variant', 'ENSG00000166924|ENST00000300179|NYAP1', 'nc|ENSG00000166924|Q6ZVC0-2|NYAP1'] 104800 8132 STDPSVLGKY True H1975_Epitope_Rep3 1065.5342399905699 1065.5331499358601 36.256 2 -0.45964557921602617 0.12610686508871755 0.9438714419765777 ['ENSG00000114315|ENST00000232424|HES1'] 12539 12844 DLCCQLAQPTL True PC9_epitope_Rep2 1203.5627803208697 1203.5616899358602 54.705 2 -0.45970359400483385 0.12611308431666302 0.9438714419765777 ['ATG4D|p.S445C|1|0.3|ENSG00000130734|chr19:10552976-10552976|C/G|missense_variant'] 118182 17228 VAVTDSLVAL True PC9_epitope_Rep2 986.5648118428599 986.56370993586 71.529 2 -0.4597283531443803 0.12611308431666302 0.9438714419765777 ['ASXL3|p.H1410L|1|0.31|ENSG00000141431|chr18:33744077-33744077|A/T|missense_variant'] 81467 5135 PQLSEAEVER True NCI_RA007_Epitope_Rep1 1156.5724164044398 1156.5707849037901 24.057 3 -0.45973851396876847 0.12611308431666302 0.9438714419765777 ['ENST00000528662.6_1_11:102584081-102593757:-|nuORF', 'ENSG00000118113|ENST00000236826|MMP8'] 119688 4382 VESWSYSQQRR True H1975_Epitope_Rep3 1424.6796754376398 1424.6785699358602 21.976 2 -0.45975993273789467 0.12611308431666302 0.9438714419765777 ['PCDHA6|p.G746E|1|0.18|ENSG00000081842|chr5:140830328-140830328|G/A|missense_variant'] 40970 19425 HWVVTEDGKI True PC9_epitope_Rep5 1182.6033226098998 1182.6022299358601 79.767 2 -0.45976688371094593 0.12611308431666302 0.9438714419765777 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 60188 6873 LIAAIELMKC[Carbamidomethyl]N True H1975_Epitope_Rep3 1274.6726654024499 1274.6715699358601 31.396 2 -0.4597946573573009 0.12612779423646647 0.9438714419765777 ['nc|ENSG00000145016|Q92622-3|RUBCN', 'nc|ENSG00000145016|Q92622-2|RUBCN', 'ENSG00000145016|ENST00000296343|RUBCN'] 20469 17009 EPSLASTLG True PC9_epitope_Rep3 873.44436235701 873.44381496793 70.582 1 -0.459803822493279 0.12614250366106144 0.9438714419765777 ['ENST00000498004.5_1_X:15768244-15782785:+|nuORF'] 45770 3951 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 20.328 2 -0.4599142551621119 0.1262582056892779 0.9438714419765777 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 69880 7117 LYASPEIVNGK True NCI_RA007_Epitope_Rep5 1189.63428838501 1189.6331899358602 34.055 2 -0.45994356062275094 0.1262665365065473 0.9438714419765777 ['ENSG00000163545|ENST00000367157|NUAK2'] 11412 19620 DFLKLCPKLQL True NCI_RA007_Epitope_Rep4 1316.75262969588 1316.7509849037901 84.781 3 -0.45997678858201707 0.1262665365065473 0.9438714419765777 ['ENST00000607957.1_1_7:123389592-123389883:+|nuORF'] 73583 7437 NGAYPGSVAA True NCI_RA007_Epitope_Rep4 905.4242956187699 905.42318993586 35.25 2 -0.4599771667580555 0.1262665365065473 0.9438714419765777 ['ENSG00000182968|ENST00000330949|SOX1'] 84670 11655 QHEYTGKIF True NCI_RA007_Epitope_Rep5 1121.5505587610498 1121.54946993586 51.483 2 -0.46003703002319696 0.1262665365065473 0.9438714419765777 ['ENST00000554960.1_1_14:72152100-72171529:+|nuORF'] 16992 12406 EGIIHSLVLRN True NCI_RA007_Epitope_Rep1 1249.7142700412098 1249.7131699358602 52.231 2 -0.4601045726383017 0.12627699143342813 0.9438714419765777 ['ENSG00000158863|ENST00000289921|FHIP2B', 'ENST00000462914.3_1_8:21957359-21958496:+|nuORF', 'ENST00000491733.2_1_8:21958038-21958496:+|nuORF'] 20315 17148 EPEEDEDCYI True PC9_epitope_Rep5 1240.4441642264799 1240.4430699358602 70.981 2 -0.4601176328364349 0.12627699143342813 0.9438714419765777 ['ENSG00000147174|ENST00000373696|GCNA'] 99584 9379 SLFHCRDGGK True NCI_RA007_Epitope_Rep2 1118.52911212382 1118.5280099358602 41.091 2 -0.4601231140432876 0.12627699143342813 0.9438714419765777 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9', 'ENST00000597145.5_1_19:4685559-4714096:-|nuORF', 'ENST00000601764.5_1_19:4697564-4723732:-|nuORF'] 53246 10284 KTFGQAVSL True PC9_epitope_Rep2 949.5232813840498 949.52218993586 44.888 2 -0.46022587063162307 0.12632535595274158 0.9438714419765777 ['ENSG00000124444|ENST00000336564|ZNF576'] 37415 8303 GWACMAPR True NCI_RA007_Epitope_Rep2 890.3891134936999 890.38856496793 36.936 1 -0.46028612383431783 0.12636946534053617 0.9438714419765777 ['ENSG00000167601|ENST00000301178|AXL', 'nc|ENSG00000167601|P30530-2|AXL', 'ENST00000599659.5_1_19:41725288-41749617:+|nuORF'] 82096 8685 PTAEGLAAA True PC9_epitope_Rep4 799.4075829254699 799.40703496793 40.898 1 -0.460288492908476 0.12636946534053617 0.9438714419765777 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 13537 10957 DPICPSLQV True PC9_epitope_Rep5 970.4793679667399 970.47826993586 47.136 2 -0.4602889782400953 0.12636946534053617 0.9438714419765777 ['ENST00000406787.7_1_11:28131748-28131859:+|nuORF'] 134622 5404 WWFRWRLDRYV True NCI_RA007_Epitope_Rep5 1681.8629999635698 1681.8613649037902 27.475 3 -0.4603556745275728 0.1263820406240008 0.9438714419765777 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 82375 14430 PTVLTEIS True H1975_Epitope_Rep2 858.46984882886 858.46930496793 60.658 1 -0.46036174836549915 0.1263820406240008 0.9438714419765777 ['ENST00000336798.11_2_1:31345605-31346058:-|nuORF'] 59922 16124 LHKGLSLL True PC9_epitope_Rep3 879.55418758951 879.55308993586 67.17 2 -0.46039092085018707 0.1264303984921917 0.9438714419765777 ['ENST00000464744.5_2_13:37625715-37633461:-|nuORF'] 85391 6278 QLEEAEEEAQR True PC9_epitope_Rep5 1330.60008770426 1330.59844490379 29.125 3 -0.4604065301684173 0.12644509886411442 0.9438714419765777 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9'] 15334 9731 EALATLPSSP True H1975_Epitope_Rep1 984.51277627 984.51166993586 42.357 2 -0.4604397631514559 0.1264576707557171 0.9438714419765777 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000469599.6_1_Y:21868632-21871788:-|nuORF'] 114056 6440 TRNNLEPL True PC9_epitope_Rep5 955.5086939490699 955.50758993586 29.745 2 -0.460439848608901 0.1264576707557171 0.9438714419765777 ['CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79'] 98835 7259 SITTDDWKDF True NCI_RA007_Epitope_Rep3 1226.54553295026 1226.54389490379 35.664 3 -0.46045558587669977 0.1264723699266339 0.9438714419765777 ['nc|ENSG00000111144|P09960-3|LTA4H', 'ENST00000548852.5_1_12:96397735-96429337:-|nuORF', 'nc|ENSG00000111144|P09960-2|LTA4H', 'nc|ENSG00000111144|P09960-4|LTA4H', 'ENSG00000111144|ENST00000228740|LTA4H', 'ENST00000548375.5_1_12:96405582-96408866:-|nuORF'] 110535 15554 TIRDYSSYY True H1975_Epitope_Rep2 1166.52440358286 1166.5233099358602 64.984 2 -0.4606205737001329 0.12648706860287065 0.9438714419765777 ['CON__Q9D312'] 82265 11191 PTLVPQPHVP True H1975_Epitope_Rep3 1083.60767971435 1083.60658993586 48.145 2 -0.46067817825633833 0.12649750975905236 0.9438714419765777 ['ENST00000271332.3_1_1:109805800-109806782:+|nuORF'] 124788 22373 VLLCGCPV True H1975_Epitope_Rep1 802.40811760278 802.40700993586 93.09 2 -0.46070054382574355 0.12649750975905236 0.9438714419765777 ['ENST00000378536.4_1_1:2240087-2240159:+|nuORF'] 59992 13748 LHPVSAIISL True PC9_epitope_Rep6 1048.62808080576 1048.6269899358601 64.676 2 -0.46073492827389056 0.12649750975905236 0.9438714419765777 ['ENST00000532485.5_1_11:76734550-76734952:+|nuORF'] 69161 21600 LVLTHSWLL True PC9_epitope_Rep3 1080.6331661862 1080.63206993586 88.379 2 -0.4607974461191837 0.12650582138771116 0.9438714419765777 ['ENST00000478484.5_1_2:27851925-27854072:+|nuORF'] 38095 4315 HENNNGQAAF True NCI_RA007_Epitope_Rep5 1100.4635346618 1100.4624299358602 23.193 2 -0.4608678869292368 0.12650582138771116 0.9438714419765777 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 93760 7515 RTSPSSLVA True PC9_epitope_Rep4 916.4977949121999 916.49668993586 36.274 2 -0.4609068833315056 0.12650582138771116 0.9438714419765777 ['nc|ENSG00000111087|P08151-2|GLI1', 'ENSG00000111087|ENST00000228682|GLI1'] 89750 4559 REYRDLTTA True NCI_RA007_Epitope_Rep4 1123.56218607391 1123.56055490379 23.938 3 -0.4609222178454998 0.12650582138771116 0.9438714419765777 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000600238.1_1_19:17972170-17973061:+|nuORF'] 62513 10140 LLSSTWATNDP True H1975_Epitope_Rep3 1203.57716743171 1203.57606993586 44.047 2 -0.46096847619955594 0.1265077469172148 0.9438714419765777 ['ENST00000225388.8_1_17:27591126-27591243:-|nuORF'] 131419 23324 VVTLLSNY True PC9_epitope_Rep4 907.50148331031 907.5009349679301 97.974 1 -0.46097422154276163 0.1265077469172148 0.9438714419765777 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 33618 5608 GLLRQEAVS True PC9_epitope_Rep1 971.5399940773499 971.53888993586 26.398 2 -0.4609876558863224 0.1265077469172148 0.9438714419765777 ['ENSG00000163798|ENST00000326019|SLC4A1AP', 'nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP'] 29692 5976 FVNTHPDK True NCI_RA007_Epitope_Rep4 956.4715801643598 956.47048993586 29.607 2 -0.460992488128543 0.1265077469172148 0.9438714419765777 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 80858 19880 PLVLLPAWLVM True NCI_RA007_Epitope_Rep1 1250.7460877634599 1250.74444490379 81.536 3 -0.46101194819422153 0.1265077469172148 0.9438714419765777 ['ENSG00000149403|ENST00000527524|GRIK4', 'ENST00000533291.5_1_11:120531027-120833419:+|nuORF'] 115975 5303 TVQELQNC[Carbamidomethyl]AFH True H1975_Epitope_Rep3 1345.60848492276 1345.60738993586 25.478 2 -0.4610134671936601 0.1265077469172148 0.9438714419765777 ['ENST00000381801.5_1_13:25841951-25848212:-|nuORF'] 16229 14572 EEGDRKISL True PC9_epitope_Rep5 1045.54038800017 1045.53928993586 61.05 2 -0.46109526292605013 0.1265077469172148 0.9438714419765777 ['nc|ENSG00000230561|P0DO97|CCDC192', 'ENSG00000230561|ENST00000514853|CCDC192', 'ENST00000513708.1_2_5:127271225-127277157:+|nuORF'] 31605 5726 GEGDSRSCLSL True H1975_Epitope_Rep3 1122.49753721202 1122.49642993586 27.054 2 -0.461123463556963 0.12651818457087105 0.9438714419765777 ['ENST00000375279.6_1_20:32236165-32236447:+|nuORF'] 110518 16316 TIQQIETI True PC9_epitope_Rep5 944.51786165044 944.51676993586 67.756 2 -0.46117393606113927 0.12651818457087105 0.9438714419765777 ['nc|ENSG00000159842|Q12979-4|ABR', 'nc|ENSG00000159842|Q12979-2|ABR', 'ENSG00000159842|ENST00000302538|ABR'] 13143 9674 DLSSKVWN True NCI_RA007_Epitope_Rep1 947.47124581119 947.47014993586 41.628 2 -0.4611877254114767 0.12651818457087105 0.9438714419765777 ['nc|ENSG00000109111|Q7KZ85-2|SUPT6H'] 1979 7024 AEKAQQSYERL True H1975_Epitope_Rep2 1321.6626283911698 1321.66099490379 31.943 3 -0.4612214248124792 0.12653074956264299 0.9438714419765777 ['nc|ENSG00000137942|Q5T0N5-3|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-4|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-2|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-5|FNBP1L', 'ENSG00000137942|ENST00000271234|FNBP1L'] 64785 10237 LRSWWPRWWWA True NCI_RA007_Epitope_Rep5 1628.8153214951599 1628.81422993586 46.007 2 -0.46124842842158054 0.12653074956264299 0.9438714419765777 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 119513 10698 VEQQLGLE True H1975_Epitope_Rep1 914.4709114580198 914.4703649679301 46.109 1 -0.4613270449754938 0.12653905671802462 0.9438714419765777 ['ENST00000497232.5_1_2:74702580-74708169:-|nuORF', 'nc|ENSG00000135637|Q17RM4-3|CCDC142', 'nc|ENSG00000135637|Q17RM4-2|CCDC142', 'ENSG00000135637|ENST00000393965|CCDC142'] 128819 7073 VSRVKRMQK True H1975_Epitope_Rep2 1130.6706314074197 1130.66899490379 32.135 3 -0.4613634282072558 0.12653905671802462 0.9438714419765777 ['ENSG00000034053|ENST00000683413|APBA2', 'APBA2|p.N599Kfs*2|1|0.26|ENSG00000034053|chr15:29106699-29106699|C/-|frameshift_variant'] 100950 6163 SLSQTALP True PC9_epitope_Rep3 815.4388830537499 815.43778993586 28.75 2 -0.46137763983904095 0.12653905671802462 0.9438714419765777 ['ENST00000252595.11_1_19:17615396-17615555:+|nuORF'] 57823 8357 LEPQQPEAP True H1975_Epitope_Rep2 1007.4923751785898 1007.49126993586 37.097 2 -0.4613796755528114 0.12653905671802462 0.9438714419765777 ['ENSG00000219607|ENST00000405617|PPP1R3G'] 51985 6758 KLAQHKHFP True NCI_RA007_Epitope_Rep3 1104.61924745756 1104.6181499358602 33.673 2 -0.46147825644601437 0.12658313009839375 0.9438714419765777 ['ATP6V1A|p.R442H|1|0.17|ENSG00000114573|chr3:113798277-113798277|G/A|missense_variant'] 119675 5693 VESRPDDP True H1975_Epitope_Rep2 913.4141248578899 913.41302993586 26.897 2 -0.4615134728860078 0.12658313009839375 0.9438714419765777 ['ENST00000424148.1_1_11:1594063-1594210:+|nuORF'] 124727 4390 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 23.239 3 -0.4616019130036828 0.12658313009839375 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 32394 11367 GGGFADPRDAG True PC9_epitope_Rep1 1018.4468219684999 1018.44572993586 48.603 2 -0.4616566133344717 0.1265978202368138 0.9438714419765777 ['ENST00000556029.5_2_12:98909542-98909698:+|nuORF'] 55772 16628 LDEFLLPAE True H1975_Epitope_Rep2 1045.5331773614098 1045.53208993586 69.19 2 -0.46166432938426716 0.12661250988109055 0.9438714419765777 ['nc|ENSG00000148384|Q9NRR6-2|INPP5E', 'ENSG00000148384|ENST00000371712|INPP5E'] 58425 18896 LEVVSRERRLK True H1975_Epitope_Rep2 1383.83103112895 1383.82939490379 78.447 3 -0.4617167894679778 0.12662719903124894 0.9438714419765777 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 128853 4613 VSSLQESGL True NCI_RA007_Epitope_Rep3 918.4658260775799 918.46472993586 25.06 2 -0.4618559714966806 0.12666061278713886 0.9438714419765777 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA'] 124722 6625 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 33.122 3 -0.4618655193852165 0.12666061278713886 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 96789 6436 SERHVLLYGTN True H1975_Epitope_Rep1 1287.6571490879096 1287.6560499358602 29.816 2 -0.4618799235245877 0.12666061278713886 0.9438714419765777 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7', 'nc|ENSG00000061273|Q8WUI4-9|HDAC7', 'nc|ENSG00000061273|Q8WUI4-10|HDAC7', 'nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 106295 10270 SVQYTITKP True PC9_epitope_Rep6 1035.5600608155898 1035.5589699358602 50.186 2 -0.4618857187132387 0.12666061278713886 0.9438714419765777 ['HAPLN1|p.P218T|1|0.48|ENSG00000145681|chr5:83644486-83644486|G/T|missense_variant'] 85240 11667 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 56.004 3 -0.4618991140894817 0.12666061278713886 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 83779 4719 QEEHQLSV True PC9_epitope_Rep1 968.4563240230399 968.45522993586 23.021 2 -0.4619148151868918 0.12666061278713886 0.9438714419765777 ['ENST00000446716.5_1_2:220081206-220083551:-|nuORF'] 80938 11702 PMQPVTAP True PC9_epitope_Rep1 839.4211248146299 839.4205749679301 49.887 1 -0.46195748883362825 0.12666061278713886 0.9438714419765777 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'ENST00000479135.5_1_22:29673993-29684776:+|nuORF', 'ENST00000483415.5_1_22:29664325-29684776:+|nuORF', 'nc|ENSG00000182944|Q01844-4|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1'] 6754 9784 AQEIEWLPFRC-[Carbamidomethyl] True NCI_RA007_Epitope_Rep1 1447.6918206238997 1447.6907299358602 42.06 2 -0.46200551963783937 0.12666061278713886 0.9438714419765777 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462'] 101893 6664 SPLHNQVL True PC9_epitope_Rep6 906.49231560894 906.49120993586 34.373 2 -0.46209552470547977 0.1266752989052752 0.9438714419765777 ['ENSG00000177992|ENST00000325643|SPATA31E1'] 107061 15113 SYLQNVSLSL True PC9_epitope_Rep5 1122.59208921986 1122.59098993586 63.137 2 -0.4621512878758699 0.12668998452949484 0.9438714419765777 ['nc|ENSG00000111452|Q6QNK2-4|ADGRD1', 'ENSG00000111452|ENST00000261654|ADGRD1'] 84422 19930 QGGITSITL True PC9_epitope_Rep1 888.4916469026 888.49054993586 81.481 2 -0.46223656407150976 0.12670466965982277 0.9438714419765777 ['nc|ENSG00000166596|Q8N1V2-3|CFAP52', 'ENSG00000166596|ENST00000352665|CFAP52', 'nc|ENSG00000166596|Q8N1V2-2|CFAP52', 'ENST00000576630.5_1_17:9487588-9546512:+|nuORF'] 62428 12072 LLSDTKLEL True PC9_epitope_Rep1 1030.5910265906998 1030.58992993586 51.295 2 -0.4623025000243188 0.12677808790395803 0.9438714419765777 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2'] 133257 19143 WEEPHDSTLY True H1975_Epitope_Rep2 1275.5407819229902 1275.53968993586 79.456 2 -0.46235241299917695 0.12677808790395803 0.9438714419765777 ['ENSG00000107829|ENST00000331272|FBXW4', 'nc|ENSG00000107829|P57775|FBXW4', 'ENST00000470093.5_1_10:103371050-103384578:-|nuORF'] 108559 4652 TEGRQLQKDL True H1975_Epitope_Rep2 1186.6305999868998 1186.6289549037901 22.992 3 -0.46236751257995223 0.12677808790395803 0.9438714419765777 ['ENST00000562590.5_1_16:28922190-28936514:-|nuORF', 'ENSG00000177548|ENST00000358201|RABEP2'] 55530 7102 LAWNSSQP True PC9_epitope_Rep4 901.42938099921 901.42828993586 34.585 2 -0.46238415030801633 0.12677808790395803 0.9438714419765777 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|66|2|sense'] 102128 5305 SPQRIASAV True PC9_epitope_Rep2 927.5137793295098 927.51268993586 25.794 2 -0.46239796811883127 0.12677808790395803 0.9438714419765777 ['ENSG00000112139|ENST00000434837|MDGA1', 'nc|ENSG00000112139|Q8NFP4-2|MDGA1'] 85932 12153 QNVVVTEAVKE True PC9_epitope_Rep3 1214.65066672514 1214.6495699358602 51.786 2 -0.4624141849777786 0.1267927700714586 0.9438714419765777 ['nc|ENSG00000154645|Q9H9P2-3|CHODL', 'chr21:17917400-18256509|409|12.4|0.24|5.68|+|ENST00000400131|CHODL,CHODL'] 5332 10212 ALSQRTTVP True PC9_epitope_Rep2 971.5399940773499 971.53888993586 44.616 2 -0.4624430823748161 0.12680745174524177 0.9438714419765777 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A', 'nc|ENSG00000100644|Q16665-2|HIF1A'] 104110 9994 SRWRERWCRVK True NCI_RA007_Epitope_Rep1 1560.8208178817597 1560.8191649037901 42.88 3 -0.46250150059070705 0.12681147237819845 0.9438714419765777 ['AFAP1-ABLIM2|1|fusion', 'nc|ENSG00000196526|Q8N556|AFAP1', 'AFAP1-ABLIM2|2|fusion', 'ENSG00000196526|ENST00000420658|AFAP1'] 99880 11969 SLHLQQVSL True PC9_epitope_Rep2 1023.5712942056299 1023.57018993586 51.359 2 -0.4625218033676677 0.12681147237819845 0.9438714419765777 ['nc|ENSG00000167920|Q8N816-2|KRT10-AS1', 'nc|ENSG00000167920|Q8N816|KRT10-AS1'] 28447 11923 FSELNHLSPV True H1975_Epitope_Rep1 1141.57677350889 1141.57566993586 50.863 2 -0.46252713569165566 0.12681147237819845 0.9438714419765777 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF'] 7726 9014 ASRSTFLDKI True PC9_epitope_Rep2 1136.61897267404 1136.61733490379 40.023 3 -0.46254033780868276 0.12681147237819845 0.9438714419765777 ['PLCB2|p.A1136Qfs*3|1|0.32|ENSG00000137841|chr15:40288867-40288867|C/-|frameshift_variant', 'nc|ENSG00000137841|Q00722-3|PLCB2', 'nc|ENSG00000137841|Q00722-2|PLCB2', 'ENSG00000137841|ENST00000260402|PLCB2', 'ENST00000558588.5_1_15:40583969-40599873:-|nuORF'] 83113 6619 PYNTETLD True PC9_epitope_Rep4 951.41854153199 951.41744993586 32.62 2 -0.4625672380314294 0.12681147237819845 0.9438714419765777 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1'] 120153 18226 VFLDFFTYAP True PC9_epitope_Rep6 1218.59611197114 1218.5950099358602 82.748 2 -0.46256962062554025 0.12681147237819845 0.9438714419765777 ['ENSG00000080608|ENST00000397885|PUM3', 'PUM3|p.K342Qfs*8|1|0.09|ENSG00000080608|chr9:2827084-2827085|-/G|frameshift_variant'] 71892 14000 MPNLRLVL True PC9_epitope_Rep4 954.56845775466 954.56736993586 61.758 2 -0.4625944215848341 0.12684296353580016 0.9438714419765777 ['FAM47B|p.H396N|1|0.3|ENSG00000189132|chrX:34944017-34944017|C/A|missense_variant'] 139108 10208 YSPAQSQATIY True H1975_Epitope_Rep2 1227.57716743171 1227.5755349037902 44.27 3 -0.4626764328580477 0.12685124480979038 0.9438714419765777 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2'] 23341 9300 EVTGEKENHC True NCI_RA007_Epitope_Rep2 1144.48188714788 1144.48078993586 40.781 2 -0.4627137796457144 0.12685124480979038 0.9438714419765777 ['ENSG00000188419|ENST00000357749|CHM'] 55417 5348 LATFWYYAK True NCI_RA007_Epitope_Rep1 1161.5858816406098 1161.58478993586 24.88 2 -0.4627541285103158 0.12685124480979038 0.9438714419765777 ['ENST00000534385.1_1_11:118272380-118277824:+|nuORF', 'ENSG00000167283|ENST00000300688|ATP5MG', 'ENST00000527186.1_1_11:118277587-118279810:+|nuORF'] 104641 15137 SSWSAGENDSY True H1975_Epitope_Rep2 1201.45236084141 1201.4512699358602 63.379 2 -0.46277272096382405 0.12685124480979038 0.9438714419765777 ['HRNR|p.A1094*|3|0.13|ENSG00000197915|chr1:152218348-152218349|GC/-|frameshift_variant', 'ENSG00000197915|ENST00000368801|HRNR', 'CON__Q86YZ3'] 119378 5700 VENRGRVNY True H1975_Epitope_Rep3 1105.5628547802498 1105.56174993586 26.955 2 -0.4628549509999148 0.12688059977474828 0.9438714419765777 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134236970-134242406:+|nuORF'] 38351 16223 HGCAPQLYCTF True PC9_epitope_Rep4 1238.5212498620597 1238.51959490379 70.344 3 -0.46286376643529525 0.12688059977474828 0.9438714419765777 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant', 'nc|ENSG00000139163|Q9HBU6-2|ETNK1', 'ETNK1-CMAS|1|fusion'] 54647 21749 LADRRYDML True PC9_epitope_Rep1 1151.57572796307 1151.57462993586 88.49 2 -0.4628831489967076 0.1268952765170617 0.9438714419765777 ['ENSG00000166938|ENST00000319212|DIS3L', 'DIS3L|p.K695Rfs*37|1|0.32|ENSG00000166938|chr15:66326243-66326243|A/-|frameshift_variant', 'nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 19042 6608 ELGNTQNFML True H1975_Epitope_Rep3 1165.54375912845 1165.5426699358602 30.37 2 -0.4628978012267434 0.12690355329949238 0.9438714419765777 ['ENSG00000167721|ENST00000301364|TSR1'] 112209 7493 TLWDSLEEP True PC9_epitope_Rep6 1088.50260550912 1088.5015099358602 38.07 2 -0.4629296902135217 0.12690355329949238 0.9438714419765777 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1'] 56823 7540 LEC[Carbamidomethyl]RRELMQL True H1975_Epitope_Rep1 1346.67987604121 1346.6787699358601 33.996 2 -0.46294516508504785 0.12690355329949238 0.9438714419765777 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2'] 16590 8360 EERNPASL True PC9_epitope_Rep3 914.4457593393398 914.44466993586 37.126 2 -0.462975181363986 0.12690355329949238 0.9438714419765777 ['ENST00000488620.5_1_9:116327559-116353744:+|nuORF'] 81877 14326 PSLDAIGDV True PC9_epitope_Rep3 885.4443623570099 885.44381496793 60.191 1 -0.46303699630966316 0.1269182284225565 0.9438714419765777 ['ENSG00000100373|ENST00000216211|UPK3A'] 48241 8194 KDELRPSSP True H1975_Epitope_Rep3 1027.52982331647 1027.5287299358602 36.498 2 -0.46308403141122423 0.12693290305230603 0.9438714419765777 ['HTR5A|p.D28E|1|0.07|ENSG00000157219|chr7:155070983-155070983|C/A|missense_variant'] 60346 13479 LIGSHPDLSF True PC9_epitope_Rep6 1084.55530978832 1084.5542099358602 63.54 2 -0.46313569955690426 0.12694330997159617 0.9438714419765777 ['ENSG00000140961|ENST00000393306|OSGIN1'] 8281 16972 ATKKTIERRY True NCI_RA007_Epitope_Rep5 1264.72516907808 1264.7240699358601 72.041 2 -0.4631469474890589 0.12694330997159617 0.9438714419765777 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant'] 102137 12016 SPREPVNV True PC9_epitope_Rep2 896.4715801643599 896.47048993586 51.536 2 -0.46317964659482513 0.12694330997159617 0.9438714419765777 ['ENST00000275364.7_1_7:2769482-2769623:-|nuORF'] 112031 20064 TLSVPNISL True PC9_epitope_Rep1 942.53859709502 942.53750993586 82.002 2 -0.4633401096042787 0.12696625436945416 0.9438714419765777 ['ENSG00000164715|ENST00000297293|LMTK2', 'LMTK2-IMMP2L|1|fusion'] 139382 9414 YTDYDDYPP True H1975_Epitope_Rep2 1147.43458551895 1147.43348993586 41.178 2 -0.463400915821492 0.12696625436945416 0.9438714419765777 ['ENSG00000179954|ENST00000389623|SSC5D', 'nc|ENSG00000179954|A1L4H1-2|SSC5D'] 78473 6711 PDDGKDLSP True H1975_Epitope_Rep2 942.42944056886 942.42834993586 30.726 2 -0.4634155293804121 0.12696625436945416 0.9438714419765777 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C', 'ENST00000380437.8_1_9:19290781-19335045:+|nuORF', 'ENST00000494124.2_1_9:19316810-19337609:+|nuORF'] 68999 20659 LVGSLSDHIVL True PC9_epitope_Rep3 1151.6550238295902 1151.65392993586 84.738 2 -0.46341679401221536 0.12696625436945416 0.9438714419765777 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000506401.6_1_17:48148218-48152910:+|nuORF', 'ENST00000505306.5_1_17:48133647-48154208:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 116074 15434 TVSEGFHVGL True PC9_epitope_Rep3 1044.52400966004 1044.52290993586 64.521 2 -0.463427870705826 0.12696625436945416 0.9438714419765777 ['MED20-TLL2|1|fusion', 'ENSG00000095587|ENST00000357947|TLL2'] 39906 13245 HQLESILAM-[Oxidation] True PC9_epitope_Rep2 1056.5273811687598 1056.5262899358602 56.223 2 -0.4634781614004753 0.12699346295393818 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 14498 8790 DTWESLQK True PC9_epitope_Rep1 1005.47672511445 1005.47562993586 38.652 2 -0.4634804930477895 0.12699346295393818 0.9438714419765777 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 101703 20014 SPGLITPTGI True PC9_epitope_Rep3 954.53859709502 954.53750993586 82.231 2 -0.46348190530331534 0.12699346295393818 0.9438714419765777 ['nc|ENSG00000126733|Q96NX9-4|DACH2', 'nc|ENSG00000126733|Q96NX9-2|DACH2', 'ENSG00000126733|ENST00000373125|DACH2'] 91964 4518 RPPPPPPPP True PC9_epitope_Rep4 950.5337864980999 950.53268993586 23.868 2 -0.4635416702595527 0.12700599909257423 0.9438714419765777 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000548125.5_1_12:107349580-107349706:+|nuORF', 'ENST00000513414.1_1_5:49962602-49962845:+|nuORF', 'ENST00000360947.7_1_14:21561312-21566652:-|nuORF', 'ENST00000451786.5_1_7:130793498-130794893:-|nuORF', 'ENSG00000253276|ENST00000523505|CCDC71L', 'nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000176058|ENST00000409012|TPRN', 'ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant', 'ENSG00000141664|ENST00000269499|ZCCHC2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 66764 13411 LSTYSCCI True PC9_epitope_Rep6 888.37212601688 888.37102993586 63.262 2 -0.46355209388924723 0.12700599909257423 0.9438714419765777 ['ENST00000376436.5_1_20:25655347-25655485:-|nuORF'] 46278 9206 ITEALVSGPKP True H1975_Epitope_Rep3 1110.62847472858 1110.62736993586 40.404 2 -0.4636439419748946 0.12707108049067384 0.9438714419765777 ['ENSG00000158435|ENST00000289382|CNOT11'] 59196 13429 LGFTGAGIAA True PC9_epitope_Rep2 876.4705175351999 876.46942993586 56.937 2 -0.46374626278231135 0.12711508409927244 0.9438714419765777 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 96092 6534 SEDLQVVAH True H1975_Epitope_Rep2 996.48762415132 996.48652993586 30.044 2 -0.46376448163627726 0.12711508409927244 0.9438714419765777 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A', 'nc|ENSG00000159398|Q6NT32-3|CES5A'] 121704 7738 VGLPDAIDIQ True PC9_epitope_Rep4 1039.55497543515 1039.5538699358601 37.155 2 -0.46377536284906873 0.12711508409927244 0.9438714419765777 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant', 'KMT2C|p.Q726Rfs*4|1|0.29|ENSG00000055609|chr7:152248254-152248258|TTCTG/-|frameshift_variant', 'KMT2C|p.V996Wfs*35|1|0.15|ENSG00000055609|chr7:152224608-152224608|T/-|frameshift_variant'] 124720 6070 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 30.859 3 -0.46384220673951965 0.12715908327172526 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 67959 7451 LTLLSSPPSA True H1975_Epitope_Rep3 984.54916177872 984.54806993586 33.639 2 -0.46390507067989745 0.12715908327172526 0.9438714419765777 ['ENST00000265354.5_1_6:43147153-43147468:+|nuORF'] 39409 3295 HLWWEWYHP True NCI_RA007_Epitope_Rep2 1352.60907669668 1352.60743490379 17.481 3 -0.4639304996486644 0.12715908327172526 0.9438714419765777 ['ENSG00000184908|ENST00000375679|CLCNKB', 'nc|ENSG00000184908|P51801-2|CLCNKB', 'CLCNKA|p.Q385K|1|0.6|ENSG00000186510|chr1:16029225-16029225|C/A|missense_variant', 'nc|ENSG00000186510|P51800-2|CLCNKA', 'nc|ENSG00000186510|P51800-3|CLCNKA', 'ENSG00000186510|ENST00000331433|CLCNKA'] 80688 12374 PLPVPPPTG True PC9_epitope_Rep2 873.49600400705 873.49490993586 52.907 2 -0.4639978029415425 0.12720521522900635 0.9438714419765777 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 89705 8065 REYPDGTVKT True PC9_epitope_Rep1 1164.5775017848796 1164.57640993586 35.846 2 -0.46402953237512745 0.12720521522900635 0.9438714419765777 ['ENSG00000151849|ENST00000381884|CENPJ'] 111192 12392 TLFLQDNNI True PC9_epitope_Rep2 1076.55022440788 1076.54912993586 52.974 2 -0.46409614886768363 0.1272660069555283 0.9438714419765777 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 848 7519 ADGSGSVV True H1975_Epitope_Rep1 690.3184335679 690.31788496793 33.919 1 -0.4641418144651173 0.1272660069555283 0.9438714419765777 ['ENSG00000123384|ENST00000243077|LRP1'] 84998 16019 QIEGRVVEI True PC9_epitope_Rep2 1041.5818588893299 1041.5807699358602 66.871 2 -0.46415231031083887 0.1272660069555283 0.9438714419765777 ['ENST00000503692.5_1_4:4422578-4426973:-|nuORF', 'ENSG00000168818|ENST00000306200|STX18'] 114938 5192 TTFTSSTA True NCI_RA007_Epitope_Rep5 814.37086306358 814.3703149679301 26.667 1 -0.46423379693886624 0.12726997832916156 0.9438714419765777 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A', 'MUC3A|p.S2662Ffs*13|3|0.16|ENSG00000169894|chr7:100959764-100959764|C/-|frameshift_variant', 'MUC3A|p.T2783Hfs*2|1|0.21|ENSG00000169894|chr7:100960120-100960121|-/C|frameshift_variant'] 73510 21529 NFFYNYMMGI True PC9_epitope_Rep3 1298.5464019807398 1298.5453099358601 88.105 2 -0.464242821626412 0.12726997832916156 0.9438714419765777 ['ENSG00000172893|ENST00000355527|DHCR7', 'ENST00000534701.1_1_11:71149825-71152361:-|nuORF'] 140207 21925 YWELIYEDSMD True PC9_epitope_Rep5 1462.59624819378 1462.59514993586 89.376 2 -0.46427197530765 0.12726997832916156 0.9438714419765777 ['ENST00000546621.5_1_12:56668606-56679804:-|nuORF', 'ENSG00000062485|ENST00000351328|CS'] 97535 8582 SGTSDPYVKI True NCI_RA007_Epitope_Rep1 1065.5342399905699 1065.5331499358601 37.385 2 -0.4642823579843456 0.12726997832916156 0.9438714419765777 ['ENSG00000170743|ENST00000318881|SYT9'] 20857 3003 EQQRRWVQLEK True NCI_RA007_Epitope_Rep2 1498.8004592766595 1498.79825987172 16.244 4 -0.46429151318641093 0.12726997832916156 0.9438714419765777 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 82760 21347 PVQRAMRLYK True PC9_epitope_Rep2 1260.7124962194 1260.71138993586 87.578 2 -0.46429615469326546 0.12726997832916156 0.9438714419765777 ['nc|ENSG00000174678|A6NHR8|FAM47DP'] 111588 10407 TLNIRQAYN True H1975_Epitope_Rep3 1091.5723568347898 1091.5712499358601 45.088 2 -0.4644452532776721 0.12738329217692218 0.9438714419765777 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1'] 5741 5348 APDEKYVAA True PC9_epitope_Rep4 962.4709114580199 962.46980993586 27.289 2 -0.464463442088053 0.12738329217692218 0.9438714419765777 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 12101 11242 DIFSFGMCAL True PC9_epitope_Rep1 1102.48273909502 1102.48164993586 48.121 2 -0.4644706517800975 0.12739795061313625 0.9438714419765777 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2'] 110570 10637 TISDLTTSL True PC9_epitope_Rep6 949.4967918526901 949.49568993586 51.731 2 -0.46452680422726067 0.12742512556061344 0.9438714419765777 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158'] 113858 4457 TREGSSPAL True PC9_epitope_Rep1 916.4614094034798 916.46030993586 22.028 2 -0.46453698426243567 0.12742512556061344 0.9438714419765777 ['ENSG00000146828|ENST00000354161|SLC12A9', 'SLC12A9|p.S653N|1|0.35|ENSG00000146828|chr7:100865818-100865818|G/A|missense_variant'] 13831 11705 DQYEICMKYGR True PC9_epitope_Rep2 1404.6166067988797 1404.61550993586 50.355 2 -0.4645429977516855 0.12742512556061344 0.9438714419765777 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1'] 117745 19044 VALILLNSL True PC9_epitope_Rep5 954.6113681124601 954.61026993586 78.281 2 -0.46470234744472366 0.1275069708065979 0.9438714419765777 ['nc|ENSG00000139292|O75473-3|LGR5', 'nc|ENSG00000139292|O75473-2|LGR5', 'ENSG00000139292|ENST00000266674|LGR5'] 34095 4311 GPADRAAASL True PC9_epitope_Rep4 927.4773938207899 927.47628993586 23.001 2 -0.4647176437981474 0.12751734215697802 0.9438714419765777 ['ENST00000562222.5_1_16:30087691-30087790:+|nuORF'] 121208 14416 VGGPEIEVG True PC9_epitope_Rep2 855.4337976733099 855.43324496793 60.72 1 -0.4647205992180168 0.12751734215697802 0.9438714419765777 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 129461 7435 VTENLSDGLR True NCI_RA007_Epitope_Rep2 1102.56185172074 1102.56074993586 33.548 2 -0.46473124669086024 0.12751734215697802 0.9438714419765777 ['ENSG00000135776|ENST00000344517|ABCB10'] 99423 11408 SLEGLGAL True H1975_Epitope_Rep3 758.41741933318 758.4168749679301 48.997 1 -0.46484036335695744 0.12752737287566332 0.9438714419765777 ['ENST00000278823.6_1_11:62361094-62361322:-|nuORF'] 6194 14517 APQQASFSV True PC9_epitope_Rep3 933.45559574705 933.45448993586 60.961 2 -0.4648622278151938 0.12752737287566332 0.9438714419765777 ['ENSG00000132622|ENST00000254963|HSPA12B'] 70059 19183 LYHDIFSRL True PC9_epitope_Rep3 1162.61349337078 1162.6118549037901 79.005 3 -0.46486235169189505 0.12752737287566332 0.9438714419765777 ['ENST00000606261.1_1_7:26224125-26225400:+|nuORF', 'ENSG00000050344|ENST00000056233|NFE2L3', 'ENST00000588207.1_1_18:57637691-57638603:+|nuORF'] 94256 6129 RWRRQQERRQQ True PC9_epitope_Rep6 1625.87233586065 1625.8706849037903 31.996 3 -0.4648975117690625 0.12752737287566332 0.9438714419765777 ['RASIP1|p.R336W|1|0.24|ENSG00000105538|chr19:48735369-48735369|G/A|missense_variant'] 98789 9220 SISSIPEK True PC9_epitope_Rep1 859.46509780159 859.46400993586 40.317 2 -0.46492936388680467 0.12752737287566332 0.9438714419765777 ['ENSG00000127083|ENST00000375550|OMD'] 124734 3989 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 21.723 3 -0.46496585935959667 0.12752737287566332 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 135927 10649 YEVNKSNYKL True H1975_Epitope_Rep3 1256.6401020414398 1256.63900993586 46.035 2 -0.4649913081189209 0.12752737287566332 0.9438714419765777 ['ENSG00000132464|ENST00000396073|ENAM'] 118563 18968 VDYNYPATL True PC9_epitope_Rep4 1054.49712620586 1054.4960299358602 81.05 2 -0.46499265411860274 0.12752737287566332 0.9438714419765777 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 99440 12190 SLEIRALLY True H1975_Epitope_Rep3 1076.62299542532 1076.62188993586 52.06 2 -0.46504564760294537 0.12752737287566332 0.9438714419765777 ['ENSG00000126882|ENST00000372271|FAM78A'] 10857 19562 DALMLKSP True PC9_epitope_Rep3 873.46298962661 873.46188993586 80.48 2 -0.4650582656881106 0.12752737287566332 0.9438714419765777 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 63765 12065 LPRSSPAELT True PC9_epitope_Rep4 1069.5767735088898 1069.57566993586 54.215 2 -0.46506780598921116 0.12752737287566332 0.9438714419765777 ['nc|ENSG00000135502|Q8NG04-2|SLC26A10P', 'nc|ENSG00000135502|Q8NG04|SLC26A10P'] 25188 21761 FDYKDQQF True PC9_epitope_Rep1 1089.4767251144501 1089.47562993586 88.537 2 -0.46511601972162936 0.12753774076002083 0.9438714419765777 ['ENSG00000165841|ENST00000371321|CYP2C19', 'ENSG00000138109|ENST00000260682|CYP2C9'] 92733 15449 RRKKRRQR True NCI_RA007_Epitope_Rep3 1182.76462333498 1182.76352993586 68.325 2 -0.46518206114202526 0.12753774076002083 0.9438714419765777 ['COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A'] 5139 7651 ALNEAAWTSA True H1975_Epitope_Rep3 1032.48762415132 1032.48652993586 34.411 2 -0.4651995405170503 0.12753774076002083 0.9438714419765777 ['ENSG00000250803|ENST00000509403|unknown'] 22549 9183 ETLQHRRYPNV True NCI_RA007_Epitope_Rep1 1411.7320453636698 1411.73094993586 39.721 2 -0.46522781987888345 0.1275523911875336 0.9438714419765777 ['ENSG00000137767|ENST00000260324|SQOR'] 130795 6750 VVEQMNKYKAR True NCI_RA007_Epitope_Rep5 1364.72345482592 1364.7223499358602 32.639 2 -0.46531019846071253 0.12760062465366984 0.9438714419765777 ['nc|ENSG00000066933|B2RTY4-5|MYO9A', 'nc|ENSG00000066933|B2RTY4-2|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A'] 100916 11904 SLSLSPALSV True PC9_epitope_Rep2 972.54916177872 972.54806993586 51.113 2 -0.46550619572261487 0.1276824394667025 0.9438714419765777 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557314.5_1_14:20839728-20850189:-|nuORF'] 127741 25540 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 107.92 2 -0.46559566293283344 0.1276967244766046 0.9438714419765777 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 73306 7480 NEKTDKERTFD True NCI_RA007_Epitope_Rep2 1381.6473722498497 1381.6462699358601 33.724 2 -0.4656233791799838 0.1276967244766046 0.9438714419765777 ['ENSG00000065526|ENST00000375759|SPEN'] 124729 4874 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 25.197 3 -0.46566518940809176 0.1276967244766046 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 20818 15515 EQNYQRWREER True NCI_RA007_Epitope_Rep1 1592.74440095252 1592.74330993586 64.435 2 -0.4656978004670994 0.1276967244766046 0.9438714419765777 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 63420 19427 LPGLGAPVE True PC9_epitope_Rep3 851.47526856247 851.47416993586 79.951 2 -0.4657080430897537 0.1276967244766046 0.9438714419765777 ['ENSG00000119227|ENST00000412723|PIGZ'] 124728 4666 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 24.37 3 -0.46574895440463066 0.1276967244766046 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 109460 9757 TGVAVMERRSC True PC9_epitope_Rep5 1207.58016172051 1207.57852490379 42.5 3 -0.46578248217053947 0.1276967244766046 0.9438714419765777 ['ENST00000496978.5_1_4:154125656-154143413:+|nuORF'] 84955 16136 QIAQVDFL True NCI_RA007_Epitope_Rep3 932.4967322830399 932.49562993586 71.17 2 -0.46580390539743055 0.1276967244766046 0.9438714419765777 ['ENST00000317089.9_1_16:46990891-46990996:-|nuORF'] 44997 4590 IQKQFDQDH True NCI_RA007_Epitope_Rep3 1157.5465360097699 1157.54488490379 24.951 3 -0.4658528269790831 0.1276967244766046 0.9438714419765777 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55004982-55005627:+|nuORF'] 96799 5564 SERTGERVSP True H1975_Epitope_Rep3 1116.5523496662 1116.5512499358601 26.443 2 -0.4659344489834741 0.1277113692834598 0.9438714419765777 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 11017 12776 DDGLFSGD True NCI_RA007_Epitope_Rep1 824.31882749072 824.31827496793 53.683 1 -0.465970924833563 0.12772172511625565 0.9438714419765777 ['ENSG00000158710|ENST00000368097|TAGLN2', 'nc|ENSG00000158710|P37802-2|TAGLN2', 'ENST00000478033.1_1_1:159889062-159890299:-|nuORF'] 62551 10524 LLTKGQAP True PC9_epitope_Rep3 826.4912529797799 826.49014993586 45.419 2 -0.4659746988177641 0.12772172511625565 0.9438714419765777 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1', 'ESPL1|p.E1511Kfs*24|1|0.2|ENSG00000135476|chr12:53288323-53288323|G/-|frameshift_variant'] 19631 13054 ELRRELQAL True PC9_epitope_Rep2 1126.64585612822 1126.64474993586 55.492 2 -0.46597764598237046 0.12772172511625565 0.9438714419765777 ['ENSG00000161904|ENST00000293760|LEMD2'] 77012 12623 NVVCFTRHEPI True PC9_epitope_Rep4 1313.65504091293 1313.65394993586 56.393 2 -0.4660723159793235 0.1277867311308085 0.9438714419765777 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 130862 18624 VVGLQEALA True PC9_epitope_Rep1 898.5123823471799 898.51128993586 76.425 2 -0.4661049160267869 0.12780137319746848 0.9438714419765777 ['ENST00000588974.1_1_19:34839831-34843857:+|nuORF'] 28334 4516 FSAPANGRDKK True NCI_RA007_Epitope_Rep3 1189.62036965637 1189.61872490379 24.62 3 -0.4661100267515402 0.1278160147725365 0.9438714419765777 ['ENSG00000206384|ENST00000358511|COL6A6', 'nc|ENSG00000206384|A6NMZ7-2|COL6A6', 'COL6A6|p.T1544Hfs*49|1|0.17|ENSG00000206384|chr3:130599777-130599777|C/-|frameshift_variant'] 86986 6232 QRWEKNRTEKL True NCI_RA007_Epitope_Rep1 1486.8004592766595 1486.7988149037901 28.274 3 -0.4661380962840239 0.1278474425475483 0.9438714419765777 ['L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|44|2|sense'] 91506 13866 RNYVHTQLFTT True NCI_RA007_Epitope_Rep2 1378.6993482530595 1378.69824993586 58.589 2 -0.4661763268298961 0.1278556441460344 0.9438714419765777 ['ENSG00000106128|ENST00000326139|GHRHR'] 463 5533 AAMETFSI True NCI_RA007_Epitope_Rep4 868.40005501688 868.39894993586 27.877 2 -0.46618088661977464 0.1278556441460344 0.9438714419765777 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD'] 72288 4479 MSEDKPQDY True H1975_Epitope_Rep3 1111.44919003727 1111.44808993586 22.346 2 -0.4661979930760987 0.1278556441460344 0.9438714419765777 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 101261 11935 SLWPPFRCRWK True H1975_Epitope_Rep3 1474.76559442142 1474.7644899358602 51.063 2 -0.46625110147744026 0.1278556441460344 0.9438714419765777 ['ENSG00000214711|ENST00000403897|CAPN14'] 118337 11927 VDFEIKSL True PC9_epitope_Rep2 949.5120479940099 949.51094993586 51.2 2 -0.4663124803256531 0.1278659908019739 0.9438714419765777 ['ENSG00000188313|ENST00000342435|PLSCR1', 'nc|ENSG00000188313|O15162-2|PLSCR1', 'ENST00000478267.5_1_3:146234735-146251325:-|nuORF'] 66308 7646 LSQLDDQYS True H1975_Epitope_Rep2 1067.47711903727 1067.4760299358602 34.363 2 -0.4663573748408713 0.1278659908019739 0.9438714419765777 ['STAT1|p.D627Tfs*31|1|0.13|ENSG00000115415|chr2:190976999-190977020|AGGGTTCAACCGCATGGAAGTC/-|frameshift_variant', 'nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 78313 8082 PASPALTAA True PC9_epitope_Rep1 797.42831837005 797.4272299358599 35.912 2 -0.46636515456030275 0.1278659908019739 0.9438714419765777 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 109419 10257 TGQTGYIPSN True PC9_epitope_Rep5 1036.48253877088 1036.4814499358602 44.44 2 -0.4664309454207953 0.12787633641597154 0.9438714419765777 ['ENSG00000197122|ENST00000373578|SRC', 'nc|ENSG00000197122|P12931-2|SRC', 'nc|ENSG00000197122|P12931-3|SRC', 'ENST00000472968.1_1_20:36012742-36022397:+|nuORF', 'SRC|p.E162Yfs*39|1|0.64|ENSG00000197122|chr20:37394208-37394214|GAGCGGT/-|frameshift_variant'] 106724 18307 SYDFRLDAI True PC9_epitope_Rep6 1098.53457434374 1098.53346993586 83.061 2 -0.46643907415684627 0.12787633641597154 0.9438714419765777 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 124732 6794 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 32.755 3 -0.4664480109242436 0.12787633641597154 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 96470 10441 SEIVCLAVPPP True H1975_Epitope_Rep2 1123.5947320721498 1123.59362993586 45.176 2 -0.4664867270522345 0.12788882735008308 0.9438714419765777 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1'] 78822 11751 PEPLRSLVP True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 50.073 2 -0.4665264202826819 0.12788882735008308 0.9438714419765777 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF', 'LLGL2|p.G740Afs*31|1|0.09|ENSG00000073350|chr17:75571705-75571705|G/-|frameshift_variant', 'nc|ENSG00000073350|Q6P1M3-3|LLGL2', 'ENST00000580027.1_1_17:73559414-73559615:+|nuORF'] 89928 14037 RFVEKYTEL True PC9_epitope_Rep3 1183.62372370131 1183.62262993586 59.085 2 -0.46661033012452363 0.1278991709461954 0.9438714419765777 ['ENSG00000181610|ENST00000313608|MRPS23'] 43676 16744 IINFISWAP True PC9_epitope_Rep2 1059.57531695691 1059.5742099358602 69.652 2 -0.4666239601491156 0.1278991709461954 0.9438714419765777 ['ENSG00000011028|ENST00000303375|MRC2', 'MRC2|p.W1035Lfs*33|2|0.27|ENSG00000011028|chr17:62688539-62688540|-/T|frameshift_variant', 'ENST00000446119.2_1_17:60758997-60759418:+|nuORF'] 75731 8583 NQWDGTQHGV True PC9_epitope_Rep5 1140.49483479008 1140.4942749679299 37.956 1 -0.46663248038619626 0.1278991709461954 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 57068 13994 LEEKLKRHLE True H1975_Epitope_Rep3 1293.74048478905 1293.7393899358601 59.147 2 -0.46666409420619964 0.1279138067028043 0.9438714419765777 ['nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'TTC3|p.E1565Kfs*6|1|0.26|ENSG00000182670|chr21:37182841-37182841|A/-|frameshift_variant', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF', 'ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 89452 4532 REQEAREPVL True H1975_Epitope_Rep2 1225.6414990237697 1225.6398449037902 22.543 3 -0.46686807200584685 0.1279598583631207 0.9438714419765777 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000572067.1_1_16:67916382-67916877:+|nuORF'] 120246 6429 VFPAGRPA True NCI_RA007_Epitope_Rep2 813.4497225209699 813.44862993586 29.614 2 -0.46688245508020754 0.1279598583631207 0.9438714419765777 ['ENST00000564834.1_1_7:152161469-152161961:+|nuORF'] 85225 3568 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 18.529 3 -0.4669404014333509 0.12799127370364155 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 75172 18264 NNLKCKWAKCP True PC9_epitope_Rep2 1303.6529327379499 1303.6518299358602 75.574 2 -0.46698649810742715 0.12800375889381124 0.9438714419765777 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|146|3|sense'] 110170 14335 TIDGYFYSL True PC9_epitope_Rep1 1077.50187723313 1077.5007899358602 59.964 2 -0.4670269195517963 0.12800375889381124 0.9438714419765777 ['ENSG00000081479|ENST00000649046|LRP2'] 91499 8626 RNWKKRWFVL True NCI_RA007_Epitope_Rep5 1431.8251579028697 1431.82351490379 39.855 3 -0.4670988337666835 0.12806443493581676 0.9438714419765777 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 68117 11167 LTPEQLEAV True H1975_Epitope_Rep3 998.5284263341399 998.5273299358599 48.051 2 -0.46710492620154404 0.12806443493581676 0.9438714419765777 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000534191.1_1_11:828562-829184:+|nuORF', 'ENST00000530737.2_1_11:828562-829423:+|nuORF'] 66509 8068 LSSCRTVRSWA True PC9_epitope_Rep4 1264.63463982152 1264.6335499358602 38.485 2 -0.4671379412422595 0.12806443493581676 0.9438714419765777 ['ENST00000368090.3_1_1:160001492-160001567:-|nuORF'] 5267 5812 ALRELGQTG True PC9_epitope_Rep2 943.5086939490699 943.50758993586 27.75 2 -0.46720510319146713 0.12809154669619785 0.9438714419765777 ['ENSG00000120833|ENST00000551556|SOCS2'] 82855 13761 PVTPVVTP True PC9_epitope_Rep6 808.46945490604 808.46890496793 64.731 1 -0.46721871390651193 0.12809154669619785 0.9438714419765777 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 80693 11876 PLPVPPPTG True PC9_epitope_Rep4 873.49600400705 873.49490993586 53.456 2 -0.46725424209158734 0.12809154669619785 0.9438714419765777 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 73210 11198 NEFSDIIK True H1975_Epitope_Rep3 964.48656152216 964.48546993586 48.171 2 -0.4673001342274216 0.12810617627812548 0.9438714419765777 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 41961 13223 IEDCVVLFIP True PC9_epitope_Rep3 1146.59948309942 1146.59838993586 55.897 2 -0.46740512588520694 0.1281543624161074 0.9438714419765777 ['ENST00000335698.4_1_10:7841012-7841072:+|nuORF'] 123501 7131 VIGTHSWREQF True NCI_RA007_Epitope_Rep2 1358.6731335052198 1358.67202993586 32.36 2 -0.4674947936606649 0.12820039595986712 0.9438714419765777 ['ENSG00000118160|ENST00000236877|SLC8A2'] 70636 4860 MAQTDPETND True PC9_epitope_Rep3 1120.43426824912 1120.4331699358602 23.792 2 -0.4674974301789665 0.12820039595986712 0.9438714419765777 ['nc|ENSG00000160679|Q9Y3Y2-4|CHTOP', 'ENSG00000160679|ENST00000368694|CHTOP', 'nc|ENSG00000160679|Q9Y3Y2-3|CHTOP'] 124739 6100 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 30.145 3 -0.4675040935936149 0.128215022733755 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 92886 9519 RRNDKIIVF True PC9_epitope_Rep2 1159.6825759901099 1159.68094490379 41.962 3 -0.4675475259359836 0.12826105192517406 0.9438714419765777 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3'] 71252 11171 MGEVVTPTAP True H1975_Epitope_Rep3 1000.4899326504399 1000.4893749679301 48.067 1 -0.46755238894770373 0.12826105192517406 0.9438714419765777 ['nc|ENSG00000148356|Q6UWE0-2|LRSAM1', 'ENSG00000148356|ENST00000300417|LRSAM1', 'nc|ENSG00000148356|Q6UWE0-3|LRSAM1', 'ENST00000483302.5_1_9:130248105-130265175:+|nuORF'] 26600 19916 FKGRWFWRVRH True PC9_epitope_Rep3 1573.8531039862098 1573.8514649037902 81.848 3 -0.4676703135915178 0.12830062070122464 0.9438714419765777 ['ENSG00000102996|ENST00000219271|MMP15'] 99356 13570 SLDSQVPVVLR True H1975_Epitope_Rep1 1211.68738658703 1211.68628993586 57.323 2 -0.46768747896271173 0.12830062070122464 0.9438714419765777 ['ENST00000399429.7_1_7:7495733-7529039:-|nuORF'] 79478 11582 PGPSASSLL True PC9_epitope_Rep1 827.43888305375 827.43778993586 49.428 2 -0.4677189150471411 0.12830062070122464 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 7506 7738 ASEILQDVDQY True H1975_Epitope_Rep2 1279.5932114186699 1279.5921099358602 34.716 2 -0.46773210447889246 0.12830062070122464 0.9438714419765777 ['nc|ENSG00000293419|Q7Z5A4|PRSS42P'] 136065 12356 YFWRIAWRFWR True NCI_RA007_Epitope_Rep2 1685.8731707244497 1685.87206993586 52.667 2 -0.46773791037612694 0.12830062070122464 0.9438714419765777 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 100999 12277 SLTAVEKKDP True PC9_epitope_Rep3 1086.5920892198599 1086.59098993586 52.249 2 -0.46778039455834625 0.1283320192581906 0.9438714419765777 ['NUP155|p.A937V|2|0.34|ENSG00000113569|chr5:37307390-37307390|G/A|missense_variant'] 77676 10737 PAAAALAQ True PC9_epitope_Rep5 711.3915389385099 711.39099496793 46.292 1 -0.467847983937287 0.12838019190766958 0.9438714419765777 ['ENST00000241041.7_1_11:45935474-45935997:-|nuORF'] 58782 20408 LFNPYYDPLQW True H1975_Epitope_Rep1 1454.68705223386 1454.6859499358602 84.876 2 -0.46797038211412695 0.12841158807642628 0.9438714419765777 ['ENSG00000089199|ENST00000378961|CHGB'] 58486 7859 LEYNYPGEAP True NCI_RA007_Epitope_Rep1 1151.5135045459897 1151.5124099358602 34.562 2 -0.4681092771582807 0.12851008152447413 0.9438714419765777 ['MN1|p.A841Pfs*6|1|0.1|ENSG00000169184|chr22:27798023-27798023|C/-|frameshift_variant', 'MN1|p.Q1067Rfs*3|1|0.35|ENSG00000169184|chr22:27797344-27797344|T/-|frameshift_variant', 'ENSG00000169184|ENST00000302326|MN1'] 90752 23768 RKREEEERRKQ True PC9_epitope_Rep4 1542.8338846632598 1542.83278993586 99.805 2 -0.46817315139285254 0.12855609232420825 0.9438714419765777 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2'] 74703 11497 NLKKAITANL True NCI_RA007_Epitope_Rep2 1084.6604435632 1084.65934993586 49.314 2 -0.46820850038427403 0.12855609232420825 0.9438714419765777 ['nc|ENSG00000171502|Q17RW2-2|COL24A1', 'ENSG00000171502|ENST00000370571|COL24A1'] 136093 13989 YGDLTDSTCL True PC9_epitope_Rep4 1086.45394106454 1086.45284993586 61.715 2 -0.46839870422593477 0.12863564695226273 0.9438714419765777 ['nc|ENSG00000112699|O60547-2|GMDS', 'ENSG00000112699|ENST00000380815|GMDS'] 55538 11025 LAYAENIAL True PC9_epitope_Rep5 976.52294703088 976.52184993586 47.396 2 -0.4684063286644529 0.12863564695226273 0.9438714419765777 ['ENSG00000196455|ENST00000356763|PIK3R4'] 124738 5252 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 26.899 3 -0.4684166668041325 0.1286481046628648 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 98590 19714 SINGQLFKP True PC9_epitope_Rep1 1002.5498304850599 1002.54872993586 80.655 2 -0.46842366705653143 0.1286481046628648 0.9438714419765777 ['ENSG00000151952|ENST00000422113|TMEM132D', 'nc|ENSG00000151952|Q14C87-2|TMEM132D'] 130208 7921 VTSEALKDPD True H1975_Epitope_Rep1 1073.52406922969 1073.5229699358601 35.419 2 -0.46845040495817336 0.12866271951158148 0.9438714419765777 ['ENSG00000183617|ENST00000330133|MRPL54'] 110603 13551 TITAEVLAID True H1975_Epitope_Rep3 1044.5702911461199 1044.56918993586 57.406 2 -0.46853932280507216 0.1286941062024085 0.9438714419765777 ['DSG3|p.N574Hfs*4|1|0.13|ENSG00000134757|chr18:31469171-31469186|CAATCGGTGTGAGATG/-|frameshift_variant', 'ENSG00000134757|ENST00000257189|DSG3'] 73124 8498 NEAIYDIC[Carbamidomethyl]R True H1975_Epitope_Rep1 1152.52335831647 1152.52226993586 37.617 2 -0.46857237735346235 0.12870871978934303 0.9438714419765777 ['ENSG00000123416|ENST00000336023|TUBA1B', 'nc|ENSG00000167552|Q71U36-2|TUBA1A', 'ENSG00000167552|ENST00000301071|TUBA1A', 'nc|ENSG00000198033|P0DPH7-2|TUBA3C', 'ENSG00000075886|ENST00000321253|TUBA3D', 'ENSG00000152086|ENST00000312988|TUBA3E', 'ENSG00000198033|ENST00000400113|TUBA3C', 'nc|ENSG00000183785|Q9NY65-2|TUBA8', 'ENSG00000127824|ENST00000248437|TUBA4A', 'nc|ENSG00000127824|P68366-2|TUBA4A', 'ENSG00000167553|ENST00000301072|TUBA1C', 'ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 68370 9895 LTSNGSWLLI True NCI_RA007_Epitope_Rep4 1102.60225998074 1102.60116993586 44.908 2 -0.46870254831300034 0.12875853163622947 0.9438714419765777 ['ENST00000337304.2_1_22:39917262-39917451:+|nuORF'] 6408 8218 APSEVAAIAP True H1975_Epitope_Rep2 924.4916469025998 924.49054993586 36.563 2 -0.4687074857024328 0.12875853163622947 0.9438714419765777 ['nc|ENSG00000180329|Q96MW1-2|CCDC43', 'ENSG00000180329|ENST00000315286|CCDC43'] 105336 6114 STVRIPAGP True H1975_Epitope_Rep2 896.5079656730798 896.50686993586 28.496 2 -0.46872728753870085 0.12875853163622947 0.9438714419765777 ['ENST00000413366.7_1_17:64803214-64803382:+|nuORF'] 108747 4609 TENNDADY True H1975_Epitope_Rep2 940.3410194872799 940.33992993586 22.831 2 -0.4687278958266701 0.12875853163622947 0.9438714419765777 ['chr3:119173638-119187775|271|26.94|0.21|7.04|+|ENST00000497685|UPK1B,UPK1B', 'chr3:119173638-119186679|214|13.77|0.12|6.86|+|ENST00000494855|UPK1B,UPK1B', 'chr3:119190319-119191006|253|13.0|0.2|6.03|+|ENST00000460625|UPK1B,UPK1B', 'ENSG00000114638|ENST00000264234|UPK1B'] 80634 17956 PLPPFPPGLF True PC9_epitope_Rep6 1080.60080342876 1080.5997099358601 81.696 2 -0.468748513571586 0.12875853163622947 0.9438714419765777 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 96984 7862 SEVKNVDLAS True NCI_RA007_Epitope_Rep3 1060.540053647 1060.53894993586 38.044 2 -0.46875850378007644 0.12875853163622947 0.9438714419765777 ['ENSG00000072415|ENST00000261681|PALS1'] 93744 1381 RTRRRKLW True H1975_Epitope_Rep3 1170.7210271874999 1170.71938490379 7.4601 3 -0.4687823006880211 0.12875853163622947 0.9438714419765777 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 60396 23457 LIIIKDLLLLI True PC9_epitope_Rep6 1278.8890465156999 1278.8874149037902 103.33 3 -0.4687842519707988 0.12875853163622947 0.9438714419765777 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 82381 17490 PTVPTVPTV True PC9_epitope_Rep4 909.5171333744499 909.51602993586 75.276 2 -0.46881101143864373 0.12876234552375204 0.9438714419765777 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 64274 14375 LQLKKEEFQ True PC9_epitope_Rep2 1161.6393737654498 1161.63826993586 60.554 2 -0.4688112141057725 0.12876234552375204 0.9438714419765777 ['ENST00000421315.1_1_6:74000735-74000831:+|nuORF'] 7723 4269 ASRRTRGP True NCI_RA007_Epitope_Rep5 899.5049459813099 899.50384993586 22.994 2 -0.46885109789610274 0.12876234552375204 0.9438714419765777 ['ENST00000455372.2_1_19:2737365-2739999:-|nuORF'] 54999 10504 LAKAINQIAA True PC9_epitope_Rep4 1011.6076797143498 1011.60658993586 48.126 2 -0.46886402841704694 0.12876234552375204 0.9438714419765777 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 124752 7730 VLKKKKKKKK True PC9_epitope_Rep6 1254.92274668582 1254.9211049037901 39.088 3 -0.4689106067176821 0.12876234552375204 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 47019 19853 IVREVIEE True PC9_epitope_Rep2 985.5444107514498 985.54330993586 81.756 2 -0.4689184588632565 0.12876234552375204 0.9438714419765777 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-4|JAML'] 100932 19039 SLSPFRRHSW True PC9_epitope_Rep2 1271.65233849099 1271.65124993586 78.599 2 -0.4690268634204026 0.1287915625681182 0.9438714419765777 ['ENSG00000170776|ENST00000394518|AKAP13', 'nc|ENSG00000170776|Q12802-4|AKAP13', 'nc|ENSG00000170776|Q12802-2|AKAP13'] 46403 11444 ITKAMSSMAAW True NCI_RA007_Epitope_Rep1 1195.5729510817498 1195.5718499358602 48.479 2 -0.46905948801784897 0.1287915625681182 0.9438714419765777 ['ENST00000402538.7_1_2:33747095-33749048:+|nuORF'] 79820 12177 PIEACTTHSP True PC9_epitope_Rep2 1054.47534521546 1054.4742499358601 52.151 2 -0.4691776891943952 0.12890461259871566 0.9438714419765777 ['ENST00000470137.5_1_13:44398084-44434086:-|nuORF'] 92317 5465 RQLREYQEL True NCI_RA007_Epitope_Rep3 1233.6465844042098 1233.64492490379 28.504 3 -0.4691813397252355 0.12890461259871566 0.9438714419765777 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.N379T|1|0.24|ENSG00000170421|chr12:52898745-52898745|T/G|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9NSB2', 'CON__H-INV:HIT000292931'] 9288 4767 AVRTLQRFQS True NCI_RA007_Epitope_Rep4 1204.6676542019597 1204.66600490379 24.769 3 -0.4692205171555721 0.12891921800073775 0.9438714419765777 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 124740 6446 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 31.462 3 -0.4692691173829219 0.1289273379606344 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 70641 7887 MCACACMCTC True PC9_epitope_Rep3 1038.25936447106 1038.2582699358602 35.321 2 -0.4692837728881554 0.1289273379606344 0.9438714419765777 ['ENST00000544665.7_1_16:31343047-31343377:+|nuORF'] 44931 13137 IQEGKLVGI True PC9_epitope_Rep5 955.5702315764698 955.56912993586 55.535 2 -0.4692853564876719 0.1289273379606344 0.9438714419765777 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'ENST00000476402.1_1_3:183685269-183689578:-|nuORF'] 35250 8975 GSLDVEKVK True NCI_RA007_Epitope_Rep1 973.54441075145 973.54330993586 38.913 2 -0.46933447167867476 0.1289273379606344 0.9438714419765777 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant', 'NEB|p.I1208V|1|0.43|ENSG00000183091|chr2:151677717-151677717|T/C|missense_variant'] 27833 11753 FQKSLNDSIQP True PC9_epitope_Rep2 1275.64591569787 1275.6448099358602 50.54 2 -0.46936508881751077 0.12893978004291845 0.9438714419765777 ['ENSG00000164438|ENST00000296921|TLX3'] 130907 25141 VVHRGRPG True PC9_epitope_Rep2 876.5042177053199 876.50366496793 102.37 1 -0.4693704019829729 0.12893978004291845 0.9438714419765777 ['ENSG00000129911|ENST00000250916|KLF16'] 138272 13467 YQVRNWLI True PC9_epitope_Rep3 1090.59236400338 1090.59126993586 56.85 2 -0.46945463147497574 0.12895438314137705 0.9438714419765777 ['ENST00000279488.7_1_12:89742839-89743004:-|nuORF'] 85224 3478 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 18.184 3 -0.46947960884933754 0.12896898575020957 0.9438714419765777 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 124766 20722 VLKNTWGVL True PC9_epitope_Rep4 1028.6018660579198 1028.6007699358602 87.87 2 -0.4695158084194303 0.12899602702294938 0.9438714419765777 ['ENST00000567614.1_1_X:153746486-153746768:-|nuORF'] 9269 7839 AVQVYHANP True PC9_epitope_Rep2 997.4981292653699 997.49702993586 35.523 2 -0.46952795969119154 0.12899602702294938 0.9438714419765777 ['nc|ENSG00000182973|Q9H9A5-4|CNOT10', 'nc|ENSG00000182973|Q9H9A5-3|CNOT10', 'nc|ENSG00000182973|Q9H9A5-5|CNOT10', 'nc|ENSG00000182973|Q9H9A5-2|CNOT10', 'ENSG00000182973|ENST00000328834|CNOT10', 'nc|ENSG00000182973|Q9H9A5-6|CNOT10'] 117592 10087 VAGPSVTL True H1975_Epitope_Rep1 742.42250471362 742.4219549679301 43.736 1 -0.4695317527253364 0.12899602702294938 0.9438714419765777 ['ENSG00000168758|ENST00000305476|SEMA4C', 'ENST00000467747.1_1_2:97526365-97527817:-|nuORF', 'ENST00000474420.1_1_2:97526365-97527817:-|nuORF'] 112250 19725 TLYLKYSNI True PC9_epitope_Rep1 1113.6070110080102 1113.6059099358602 80.7 2 -0.469632139437862 0.12904415462500418 0.9438714419765777 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 53579 16338 KVTLPVNER True PC9_epitope_Rep5 1054.61349337078 1054.6123899358602 67.841 2 -0.4696466056000387 0.12905442781232715 0.9438714419765777 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 3214 9382 AGEVAKEWQEL True PC9_epitope_Rep5 1258.6193665968597 1258.61826993586 41.042 2 -0.46964997104135864 0.12905442781232715 0.9438714419765777 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF'] 16143 8760 EEELKEHLL True NCI_RA007_Epitope_Rep2 1138.5870038394198 1138.5859099358602 38.72 2 -0.46966815820309343 0.12905442781232715 0.9438714419765777 ['ENSG00000183576|ENST00000331768|SETD3'] 3808 19924 AGVNKHLW True PC9_epitope_Rep3 923.49773534255 923.49662993586 81.879 2 -0.4697476330790056 0.1290857889972845 0.9438714419765777 ['ENSG00000170190|ENST00000329783|SLC16A5'] 343 7868 AAKDAEKIREL True NCI_RA007_Epitope_Rep1 1242.6932002434598 1242.6915449037901 34.596 3 -0.4697668784563982 0.12910038720059003 0.9438714419765777 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 68299 13648 LTRPPYCL True PC9_epitope_Rep1 961.5055231449298 961.50442993586 57.353 2 -0.4698241937527722 0.12918203151190077 0.9438714419765777 ['ENST00000564080.1_1_15:45879608-45951106:+|nuORF', 'ENST00000567740.5_1_15:45879608-45897630:+|nuORF', 'ENST00000562384.5_1_15:45879608-45890085:+|nuORF', 'ENST00000567461.5_1_15:45879608-45895317:+|nuORF', 'nc|ENSG00000104164|Q9UL45-2|BLOC1S6', 'ENSG00000104164|ENST00000220531|BLOC1S6'] 59640 7937 LGSLSSAREI True H1975_Epitope_Rep1 1031.56112344475 1031.56002993586 35.479 2 -0.4699452835776433 0.12926150648654083 0.9438714419765777 ['ENSG00000157214|ENST00000394621|STEAP2', 'nc|ENSG00000157214|Q8NFT2-3|STEAP2', 'nc|ENSG00000157214|Q8NFT2-2|STEAP2'] 11850 4643 DHNDGLGNAF True NCI_RA007_Epitope_Rep2 1058.44173658806 1058.4406299358602 22.686 2 -0.4699891671556641 0.12926150648654083 0.9438714419765777 ['ENSG00000271447|ENST00000605424|MMP28'] 97536 8673 SGTSDPYVKI True NCI_RA007_Epitope_Rep1 1065.5342399905699 1065.5331499358601 37.738 2 -0.4700488791254502 0.12929069455618128 0.9438714419765777 ['ENSG00000170743|ENST00000318881|SYT9'] 130313 12219 VTTNSLLP True PC9_epitope_Rep2 843.4701831820299 843.46908993586 52.313 2 -0.47005876439242567 0.12929069455618128 0.9438714419765777 ['ENST00000547345.5_1_12:57928805-57940846:-|nuORF'] 11430 8843 DFQKILDTYSQ True NCI_RA007_Epitope_Rep1 1356.6561460284 1356.6544949037902 38.396 3 -0.47010463286100035 0.1293009536259574 0.9438714419765777 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 127407 23813 VQQYYRKLRAF True PC9_epitope_Rep1 1470.80956740838 1470.80846993586 96.394 2 -0.4701139987929961 0.1293009536259574 0.9438714419765777 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'ENST00000482556.5_1_20:47242425-47249020:-|nuORF'] 96277 13446 SEESHEQF True H1975_Epitope_Rep1 991.38830403287 991.38720993586 56.834 2 -0.4701204056645071 0.1293009536259574 0.9438714419765777 ['ENSG00000185359|ENST00000329138|HGS', 'nc|ENSG00000185359|O14964-2|HGS', 'ENST00000571885.1_1_17:79662737-79663393:+|nuORF'] 134277 11073 WRRWNRFNRR True H1975_Epitope_Rep1 1545.8290144966898 1545.82735490379 47.555 3 -0.47013914652176075 0.12931554602131795 0.9438714419765777 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 130486 10791 VTVQHAAL True PC9_epitope_Rep3 837.4708518883699 837.46974993586 46.471 2 -0.4701817516797025 0.1293279705044411 0.9438714419765777 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'nc|ENSG00000138698|P52306-6|RAP1GDS1'] 56265 10457 LDQHCFIQ True PC9_epitope_Rep1 1002.4593012285 1002.4582099358599 45.11 2 -0.47018720521984786 0.1293279705044411 0.9438714419765777 ['ENST00000404006.5_1_7:5024574-5028783:+|nuORF', 'ENST00000407184.5_2_7:5024574-5087708:+|nuORF', 'ENST00000493407.5_1_7:5024574-5026202:+|nuORF', 'ENST00000403969.5_1_7:5024574-5036351:+|nuORF'] 67918 15429 LTLEETHSI True PC9_epitope_Rep5 1041.53423999057 1041.5331499358601 64.357 2 -0.4703389722504898 0.12934256171339512 0.9438714419765777 ['nc|ENSG00000184887|Q96KE9-2|BTBD6', 'nc|ENSG00000184887|Q96KE9-1|BTBD6', 'ENSG00000184887|ENST00000392554|BTBD6'] 3129 8694 AGDKHFLP True H1975_Epitope_Rep3 883.4552018242299 883.45410993586 38.441 2 -0.4704277585206657 0.1293906689904813 0.9438714419765777 ['ENST00000375206.6_1_9:100008408-100053768:+|nuORF', 'ENST00000375204.2_1_9:100008408-100054866:+|nuORF', 'ENST00000527128.5_1_9:100008408-100053855:+|nuORF'] 109015 7936 TEVTWIDGGP True H1975_Epitope_Rep1 1073.5029398622898 1073.50184993586 35.475 2 -0.4704622237215987 0.12942201665744976 0.9438714419765777 ['ENSG00000257743|ENST00000477922|MGAM2'] 59523 10680 LGPTQEAL True PC9_epitope_Rep4 827.4388830537499 827.43778993586 48.826 2 -0.470504367128794 0.12943660555685893 0.9438714419765777 ['ENST00000318407.4_1_2:242511838-242512021:+|nuORF'] 33687 8351 GLPRSDVL True PC9_epitope_Rep5 855.48141657207 855.48030993586 37.063 2 -0.4705427978939354 0.12946952179886734 0.9438714419765777 ['ENSG00000205138|ENST00000378887|SDHAF1'] 106709 18516 SYATLLHVL True PC9_epitope_Rep6 1015.5702315764698 1015.56912993586 83.863 2 -0.47058229785493644 0.12946952179886734 0.9438714419765777 ['ENSG00000183840|ENST00000329321|GPR39'] 86246 14898 QPYMQEVV True PC9_epitope_Rep4 992.4637179025998 992.4631649679301 65.244 1 -0.4705876937388569 0.12946952179886734 0.9438714419765777 ['IL22|p.R110S|1|0.16|ENSG00000127318|chr12:68252570-68252570|C/A|missense_variant', 'ENSG00000127318|ENST00000538666|IL22'] 75716 8251 NQVVSEAEKIV True H1975_Epitope_Rep1 1214.65066672514 1214.6495699358602 36.678 2 -0.47059799799064445 0.12946952179886734 0.9438714419765777 ['nc|ENSG00000164494|Q86YH6-2|PDSS2', 'ENSG00000164494|ENST00000369037|PDSS2'] 20851 8237 EQQLGKEAP True H1975_Epitope_Rep3 998.5032742154598 998.50216993586 36.667 2 -0.47061075222713 0.12946952179886734 0.9438714419765777 ['ENSG00000136040|ENST00000258526|PLXNC1', 'ENST00000549217.5_1_12:94694713-94697836:+|nuORF'] 67957 8918 LTLLSEQAP True H1975_Epitope_Rep2 970.53351171458 970.53240993586 39.265 2 -0.4706179600553912 0.12946952179886734 0.9438714419765777 ['ENSG00000242173|ENST00000219409|ARHGDIG'] 137800 15920 YPEFPVLEC True NCI_RA007_Epitope_Rep3 1095.4946836777099 1095.4935899358602 70.282 2 -0.4706303767594764 0.12946952179886734 0.9438714419765777 ['nc|ENSG00000138068|Q6IMI4-2|SULT6B1', 'ENSG00000138068|ENST00000535679|SULT6B1'] 20866 6296 EQRERERWQR True NCI_RA007_Epitope_Rep2 1471.7392560024298 1471.73761490379 29.095 3 -0.4706341176506805 0.12946952179886734 0.9438714419765777 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 10589 6902 CRRLRRSP True NCI_RA007_Epitope_Rep5 1042.59304979306 1042.5919499358602 33.23 2 -0.4708144500990915 0.1295132780430594 0.9438714419765777 ['ENST00000607453.1_1_1:245133290-245134376:-|nuORF'] 90051 25314 RGGQPLKKRR True H1975_Epitope_Rep1 1194.7421565549 1194.74050490379 104.86 3 -0.4708154930553742 0.1295132780430594 0.9438714419765777 ['nc|ENSG00000183814|Q5TKA1-2|LIN9'] 101260 11903 SLWPPFRCRWK True H1975_Epitope_Rep1 1474.76559442142 1474.7644899358602 50.786 2 -0.4708319927533293 0.1295132780430594 0.9438714419765777 ['ENSG00000214711|ENST00000403897|CAPN14'] 95686 16429 SAWPEKRGEIR True H1975_Epitope_Rep1 1327.6996826062298 1327.6985899358601 68.555 2 -0.4708635404703305 0.12952135234297776 0.9438714419765777 ['ENSG00000133313|ENST00000324262|CNDP2', 'nc|ENSG00000133313|Q96KP4-2|CNDP2', 'CNDP2|p.W309Cfs*23|1|0.3|ENSG00000133313|chr18:74516250-74516250|G/-|frameshift_variant', 'ENST00000582620.5_1_18:72167208-72179735:+|nuORF'] 26858 13671 FLEYGFVSVHN True H1975_Epitope_Rep1 1310.62953735774 1310.62844993586 57.721 2 -0.4708954045112993 0.12952135234297776 0.9438714419765777 ['nc|ENSG00000185917|Q9NVD3-3|SETD4', 'ENSG00000185917|ENST00000332131|SETD4', 'nc|ENSG00000185917|Q9NVD3-4|SETD4'] 130404 9075 VTVPPDVFFF True NCI_RA007_Epitope_Rep5 1166.60119735158 1166.60010993586 41.562 2 -0.47090743440371663 0.12952135234297776 0.9438714419765777 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 676 9456 AAVDAGMAM True NCI_RA007_Epitope_Rep5 835.35681030591 835.35570993586 43.009 2 -0.4709510361314708 0.12952135234297776 0.9438714419765777 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 14877 18993 DYGNGFGGF True PC9_epitope_Rep6 932.3664463894798 932.3658949679301 85.701 1 -0.47099278129515487 0.129535935667616 0.9438714419765777 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 79506 12878 PGQLKILTG True PC9_epitope_Rep1 925.55966689277 925.55856993586 54.408 2 -0.47104055250219573 0.129567271447957 0.9438714419765777 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 123457 19250 VIFAYVADVT True PC9_epitope_Rep1 1096.5804619069997 1096.57936993586 78.845 2 -0.471051945311629 0.12958185351470883 0.9438714419765777 ['ENSG00000148110|ENST00000375344|MFSD14B', 'nc|ENSG00000148110|Q5SR56-2|MFSD14B'] 59419 11492 LGLTDHAEL True PC9_epitope_Rep6 967.49746055903 967.49636993586 55.278 2 -0.4710799366085981 0.12962993985894494 0.9438714419765777 ['OR5J2|p.L163Ffs*8|1|0.3|ENSG00000174957|chr11:56177103-56177104|-/T|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 49393 11866 KIIYIVHDEV True PC9_epitope_Rep4 1227.6863239578702 1227.68467490379 53.418 3 -0.47108489014911686 0.12963583369627124 0.9438714419765777 ['nc|ENSG00000100567|P25788-2|PSMA3', 'ENSG00000100567|ENST00000216455|PSMA3'] 32869 21779 GILGNGLVI True PC9_epitope_Rep1 854.5225531080599 854.52200496793 88.601 1 -0.47109955972536843 0.12963583369627124 0.9438714419765777 ['nc|ENSG00000174600|Q99788-2|CMKLR1', 'ENSG00000174600|ENST00000550402|CMKLR1'] 60602 11519 LISLDFRLHTP True H1975_Epitope_Rep3 1310.73467113262 1310.73356993586 49.433 2 -0.47110598663636666 0.12963583369627124 0.9438714419765777 ['OR2A25|p.S52F|1|0.32|ENSG00000221933|chr7:144074374-144074374|C/T|missense_variant'] 42610 11851 IETEGEKQELW True PC9_epitope_Rep5 1360.6510606479596 1360.64941490379 50.583 3 -0.4711192481621753 0.12963583369627124 0.9438714419765777 ['nc|ENSG00000011143|Q9NXB0-3|MKS1', 'ENSG00000011143|ENST00000393119|MKS1', 'nc|ENSG00000011143|Q9NXB0-2|MKS1'] 27798 10870 FQEKRQWLLKY True H1975_Epitope_Rep3 1537.8405331834897 1537.8388949037903 46.894 3 -0.4711250881449816 0.12963583369627124 0.9438714419765777 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 1748 16051 AEGVTVQIKAE True PC9_epitope_Rep2 1143.6135529404298 1143.61244993586 66.996 2 -0.47120638137092735 0.12966499162479062 0.9438714419765777 ['ENSG00000160111|ENST00000443236|CPAMD8', 'nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'CPAMD8|p.V1154Sfs*25|1|0.33|ENSG00000160111|chr19:16928060-16928060|C/-|frameshift_variant'] 288 9901 AAHEAALL True PC9_epitope_Rep1 794.42865272322 794.42754993586 42.942 2 -0.4712554549601513 0.12966499162479062 0.9438714419765777 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN', 'nc|ENSG00000160145|O60229|KALRN'] 69406 8984 LVQRGGLPVP True H1975_Epitope_Rep1 1034.6236641316598 1034.6225699358602 39.463 2 -0.4712604492762621 0.12966653826184535 0.9438714419765777 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-4|MAGI1', 'nc|ENSG00000151276|Q96QZ7-3|MAGI1', 'nc|ENSG00000151276|Q96QZ7-5|MAGI1'] 56839 12452 LEDDSMSVIEP True PC9_epitope_Rep1 1233.54348434493 1233.54238993586 52.763 2 -0.4712779316455966 0.12966653826184535 0.9438714419765777 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-2|EFHC1'] 98585 9314 SINEGMTRWFS True H1975_Epitope_Rep1 1326.6026709869 1326.6015699358602 40.733 2 -0.47128257657915024 0.12966653826184535 0.9438714419765777 ['PIWIL1|p.L721Ffs*9|1|0.26|ENSG00000125207|chr12:130363106-130363107|-/T|frameshift_variant', 'nc|ENSG00000125207|Q96J94-3|PIWIL1', 'nc|ENSG00000125207|Q96J94-2|PIWIL1', 'ENSG00000125207|ENST00000245255|PIWIL1'] 131768 13774 VYADQPHIF True PC9_epitope_Rep6 1088.52909504048 1088.5279899358602 64.783 2 -0.47128604569432564 0.12966653826184535 0.9438714419765777 ['ENSG00000100439|ENST00000428304|ABHD4'] 130126 6998 VTRIQRFQD True NCI_RA007_Epitope_Rep4 1161.6254550368099 1161.62380490379 33.543 3 -0.4713146223781127 0.12966653826184535 0.9438714419765777 ['ENSG00000140525|ENST00000310775|FANCI', 'nc|ENSG00000140525|Q9NVI1-2|FANCI', 'nc|ENSG00000140525|Q9NVI1-1|FANCI', 'chr15:89293997-89294957|497|13.39|0.76|4.14|+|ENST00000676003|FANCI,FANCI'] 34154 8244 GPEKARPRTQG True H1975_Epitope_Rep1 1195.6421677301098 1195.64106993586 36.652 2 -0.471321346092069 0.12966653826184535 0.9438714419765777 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 101263 12383 SLWPPFRCRWK True NCI_RA007_Epitope_Rep2 1474.76559442142 1474.7644899358602 52.773 2 -0.47132571999885164 0.12966653826184535 0.9438714419765777 ['ENSG00000214711|ENST00000403897|CAPN14'] 33113 7068 GKKSGFVN True NCI_RA007_Epitope_Rep5 835.45520182423 835.45410993586 33.869 2 -0.47138457476557616 0.1296811147584913 0.9438714419765777 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 46660 18520 ITVHHTEVL True PC9_epitope_Rep1 1047.57129420563 1047.57018993586 76.026 2 -0.4714102519119004 0.12969569076688606 0.9438714419765777 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 55280 10901 LAQYYKVLVD True PC9_epitope_Rep6 1210.65977485686 1210.6586699358602 52.795 2 -0.47159215962957185 0.12974376151398426 0.9438714419765777 ['ENSG00000167971|ENST00000343516|CASKIN1'] 98906 14109 SIWLWQLHP True H1975_Epitope_Rep2 1178.62366413166 1178.6225699358602 59.425 2 -0.4716406137313368 0.1297583359849944 0.9438714419765777 ['ENST00000447544.6_2_7:80290452-80292345:+|nuORF'] 98544 5067 SILRDHPENR True NCI_RA007_Epitope_Rep2 1235.63708234967 1235.6359899358602 24.336 2 -0.47164833485353524 0.1297707366905029 0.9438714419765777 ['ENSG00000089723|ENST00000203664|OTUB2', 'nc|ENSG00000089723|Q96DC9-2|OTUB2'] 35692 12283 GTPLSPGSL True PC9_epitope_Rep5 827.43888305375 827.43778993586 52.235 2 -0.4716559158718722 0.1297707366905029 0.9438714419765777 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-3|SLCO4A1', 'nc|ENSG00000101187|Q96BD0-2|SLCO4A1'] 42343 10074 IELLSAGGA True H1975_Epitope_Rep2 829.4545331178899 829.4539849679301 43.742 1 -0.4718034975193614 0.1297853099775597 0.9438714419765777 ['nc|ENSG00000164808|Q14159-2|SPIDR', 'ENSG00000164808|ENST00000297423|SPIDR', 'ENST00000518060.5_2_8:48644710-48648009:+|nuORF'] 115500 13001 TVGGTIYCLI True PC9_epitope_Rep5 1038.5419682232998 1038.5408699358602 55.017 2 -0.471911843387344 0.12981662898769153 0.9438714419765777 ['ENSG00000115944|ENST00000234301|COX7A2L', 'ENST00000464443.5_1_2:42578361-42588194:-|nuORF'] 33014 10901 GIWSKWAPP True PC9_epitope_Rep3 1040.5443511817998 1040.54324993586 46.913 2 -0.4719672016322342 0.1298312010181526 0.9438714419765777 ['ENSG00000091664|ENST00000263160|SLC17A6', 'ENST00000598018.1_1_19:49936751-49940072:-|nuORF', 'nc|ENSG00000104888|Q9P2U7-2|SLC17A7', 'nc|ENSG00000104888|Q9P2U7-3|SLC17A7', 'ENSG00000104888|ENST00000221485|SLC17A7'] 437 16167 AALQELLSK True PC9_epitope_Rep3 971.5651461960299 971.56404993586 67.327 2 -0.4720094837724248 0.1298457725605774 0.9438714419765777 ['ENSG00000118181|ENST00000527673|RPS25'] 104437 6801 SSLEKIVP True H1975_Epitope_Rep2 871.5014833103099 871.50038993586 31.078 2 -0.47206484393489734 0.12986839020796356 0.9438714419765777 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 62517 7028 LLSTTTVP True H1975_Epitope_Rep3 830.4749342093 830.47382993586 31.996 2 -0.47208358266684225 0.12986839020796356 0.9438714419765777 ['OR52B2|p.P131Hfs*2|1|0.14|ENSG00000255307|chr11:6169935-6169935|G/-|frameshift_variant', 'OR52B2|p.F170Sfs*3|1|0.18|ENSG00000255307|chr11:6169818-6169818|A/-|frameshift_variant', 'ENSG00000255307|ENST00000530810|OR52B2'] 78800 4146 PELSPSPQSP True H1975_Epitope_Rep3 1037.50293986229 1037.50184993586 21.068 2 -0.4721225572559383 0.12986839020796356 0.9438714419765777 ['ENSG00000129749|ENST00000250699|CHRNA10'] 116526 19227 TYEFELWP True PC9_epitope_Rep6 1083.49131254943 1083.49020993586 86.608 2 -0.4721324602757581 0.12986839020796356 0.9438714419765777 ['ENSG00000118492|ENST00000397944|ADGB'] 21189 11515 ERERLVTTAL True PC9_epitope_Rep3 1186.6669854956199 1186.6653449037901 49.296 3 -0.47213597938894153 0.12986839020796356 0.9438714419765777 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion', 'CCPG1|p.R563Kfs*79|1|0.19|ENSG00000260916|chr15:55360085-55360085|C/-|frameshift_variant'] 124724 3552 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 19.678 3 -0.47216991549659815 0.12988295966378113 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 8123 9625 ATETHLNIY True H1975_Epitope_Rep2 1060.5189242795998 1060.5178299358602 41.999 2 -0.4723206144610783 0.12994775969459513 0.9438714419765777 ['ENSG00000074276|ENST00000261944|CDHR2', 'CDHR2|p.T807Hfs*14|2|0.22|ENSG00000074276|chr5:176584693-176584694|-/C|frameshift_variant'] 16714 6083 EEVSVTVKA True H1975_Epitope_Rep2 960.5127762699999 960.51166993586 28.373 2 -0.472327783810596 0.12996232733361238 0.9438714419765777 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 127311 8752 VQLVVIRED True PC9_epitope_Rep6 1069.6131590176099 1069.61206993586 43.555 2 -0.4724631188262245 0.13001038073870677 0.9438714419765777 ['FAM161A|p.P128L|1|0.27|ENSG00000170264|chr2:61842161-61842161|G/A|missense_variant'] 35637 10618 GTLTAEQLE True NCI_RA007_Epitope_Rep3 960.47639076128 960.47528993586 48.815 2 -0.4725825791502032 0.13009191822793711 0.9438714419765777 ['nc|ENSG00000112167|Q9NPB0-2|SAYSD1', 'ENSG00000112167|ENST00000229903|SAYSD1'] 87647 11533 QVAERVEAL True PC9_epitope_Rep1 1013.5505587610497 1013.54946993586 49.241 2 -0.47262190879111704 0.13010648272167158 0.9438714419765777 ['nc|ENSG00000069966|O14775-3|GNB5', 'nc|ENSG00000069966|O14775-2|GNB5', 'ENSG00000069966|ENST00000261837|GNB5', 'ENST00000560075.1_1_15:52439654-52476873:-|nuORF'] 59759 18719 LGWRRWRP True PC9_epitope_Rep1 1125.6308152007698 1125.62970993586 76.792 2 -0.47271377426455047 0.13011668982605348 0.9438714419765777 ['ENST00000421814.6_1_5:162932622-162940637:+|nuORF'] 66041 11589 LSNDHICYFLY True H1975_Epitope_Rep2 1386.6278231055799 1386.62672993586 49.641 2 -0.4727183328563973 0.13011668982605348 0.9438714419765777 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3', 'ENST00000483869.1_1_16:30129346-30134419:-|nuORF', 'ENST00000478356.5_2_16:30128576-30134273:-|nuORF', 'nc|ENSG00000100030|P28482-2|MAPK1', 'nc|ENSG00000102882|P27361-2|MAPK3'] 19943 18107 ELYSQQHRQR True PC9_epitope_Rep3 1343.66944510711 1343.66834993586 74.844 2 -0.4727351858325303 0.13011668982605348 0.9438714419765777 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 107396 13580 SYSYVLFSI True PC9_epitope_Rep1 1077.53826274185 1077.5371699358602 57.091 2 -0.47286888467730187 0.130164735819996 0.9438714419765777 ['ENSG00000149133|ENST00000278409|OR5F1'] 56472 13190 LDTEAGRCVP True PC9_epitope_Rep1 1059.5018943164698 1059.5007899358602 55.599 2 -0.4729097924104996 0.13020188154943252 0.9438714419765777 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 129653 12768 VTHRYLCRQCK True NCI_RA007_Epitope_Rep1 1405.7070935691297 1405.70598993586 53.652 2 -0.4729402247170935 0.13020188154943252 0.9438714419765777 ['ENSG00000136367|ENST00000419474|ZFHX2'] 11114 5571 DEEEDHWKL True H1975_Epitope_Rep3 1199.50948179471 1199.5078349037901 26.47 3 -0.47294599210724064 0.13020188154943252 0.9438714419765777 ['ENSG00000101350|ENST00000375712|KIF3B', 'nc|ENSG00000101350|O15066-2|KIF3B'] 11905 5911 DHRRYYHDHWR True H1975_Epitope_Rep1 1639.7504893924702 1639.74883490379 27.809 3 -0.4729532226510252 0.13020188154943252 0.9438714419765777 ['ENSG00000188070|ENST00000433688|ZFTA'] 124723 6939 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 34.401 3 -0.4729602969877439 0.13020188154943252 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 21730 7044 ESAKSIEER True H1975_Epitope_Rep3 1047.51965255559 1047.5185499358602 32.059 2 -0.4729726241033046 0.13020188154943252 0.9438714419765777 ['ENSG00000152404|ENST00000282251|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'CWF19L2|p.A394Ifs*9|1|0.27|ENSG00000152404|chr11:107429055-107429056|AA/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 108756 18976 TENVVQLIN True PC9_epitope_Rep5 1028.5502244078798 1028.5496749679298 78.018 1 -0.4729859408263059 0.13023318100403422 0.9438714419765777 ['nc|ENSG00000135299|Q9Y2G4-4|ANKRD6', 'nc|ENSG00000135299|Q9Y2G4-3|ANKRD6', 'ENSG00000135299|ENST00000339746|ANKRD6', 'nc|ENSG00000135299|Q9Y2G4-1|ANKRD6'] 58069 8886 LERPRENNFFH True NCI_RA007_Epitope_Rep1 1457.7163952995302 1457.71474490379 38.565 3 -0.47307955568874516 0.13026447941078004 0.9438714419765777 ['ENST00000454741.5_1_22:28396099-28396309:+|nuORF'] 45505 11694 ISERTPSAL True PC9_epitope_Rep2 972.52400966004 972.52290993586 50.312 2 -0.4731294199974827 0.13027031550757384 0.9438714419765777 ['ENSG00000109107|ENST00000226253|ALDOC'] 69346 21760 LVPYWELI True PC9_epitope_Rep5 1031.56916894731 1031.5680699358602 88.729 2 -0.4731318724348603 0.13027031550757384 0.9438714419765777 ['nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2'] 79122 11808 PGAELAELP True H1975_Epitope_Rep2 895.4650978015899 895.46454496793 50.495 1 -0.47314787170885275 0.13027031550757384 0.9438714419765777 ['ENSG00000179598|ENST00000321560|PLD6'] 32682 14921 GHPLDPVGTL True PC9_epitope_Rep5 1004.52909504048 1004.52798993586 62.398 2 -0.47317744346064605 0.13027031550757384 0.9438714419765777 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 29009 11528 FTIQCERE True PC9_epitope_Rep3 1024.4647805317597 1024.4636899358602 49.349 2 -0.47321207977053814 0.13027031550757384 0.9438714419765777 ['ENST00000489914.1_1_2:74732213-74732711:-|nuORF'] 5054 9988 ALLIISYSS True H1975_Epitope_Rep1 965.5433481222901 965.54224993586 43.353 2 -0.47325913519172597 0.13030161014963346 0.9438714419765777 ['ENST00000543310.5_1_12:133617958-133618057:+|nuORF'] 55518 4627 LAVYDPQWKPP True H1975_Epitope_Rep3 1312.6815729305997 1312.67992490379 22.92 3 -0.47330239130044766 0.1303139854053692 0.9438714419765777 ['ENST00000580525.5_2_17:29250066-29258933:+|nuORF'] 20809 5852 EQNWRQHREAY True H1975_Epitope_Rep1 1515.69672248411 1515.69508490379 27.58 3 -0.473315865216161 0.1303139854053692 0.9438714419765777 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 43334 9905 IHGRVCWTP True PC9_epitope_Rep6 1067.53346922827 1067.53236993586 48.609 2 -0.473346160567656 0.13032199759003882 0.9438714419765777 ['ENST00000229829.6_1_6:32974298-32974526:-|nuORF'] 10512 5134 CPCPGASCK True NCI_RA007_Epitope_Rep3 864.32921565908 864.32810993586 27.189 2 -0.4733643797745315 0.13032199759003882 0.9438714419765777 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1', 'ENSG00000181788|ENST00000312960|SIAH2'] 76480 10067 NTDFKQLYQTL True H1975_Epitope_Rep1 1369.68778050985 1369.6866899358602 43.663 2 -0.47342752628512946 0.13032199759003882 0.9438714419765777 ['ENSG00000254598|ENST00000528848|CSNK2A3', 'ENSG00000101266|ENST00000217244|CSNK2A1'] 117546 9214 VAGDKNTAIV True H1975_Epitope_Rep1 986.53965972418 986.53856993586 40.351 2 -0.4734292676070232 0.13032199759003882 0.9438714419765777 ['ENSG00000204361|ENST00000389586|NXPE2'] 12094 18864 DIFKDLNVGI True PC9_epitope_Rep3 1132.6128246644398 1132.61172993586 77.784 2 -0.4734593206398951 0.13033655213964151 0.9438714419765777 ['ENSG00000095110|ENST00000534921|NXPE1', 'nc|ENSG00000095110|Q8N323-2|NXPE1'] 83310 15999 QALLC[Carbamidomethyl]LTEL True PC9_epitope_Rep1 1059.5634322233 1059.5623299358601 66.351 2 -0.4734842950595174 0.13035110620209525 0.9438714419765777 ['SNRPA1|p.P88L|1|0.22|ENSG00000131876|chr15:101292008-101292008|G/A|missense_variant'] 101820 20722 SPIFLGGV True PC9_epitope_Rep1 788.4432401581998 788.44214993586 84.532 2 -0.473556127463042 0.13043259978244498 0.9438714419765777 ['chr1:245814415-245816795|376|16.24|0.01|10.82|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|79', 'chr1:245764149-245816795|362|34.57|0.05|9.58|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|79'] 82518 13505 PVFAKTVSI True NCI_RA007_Epitope_Rep3 960.5644179200399 960.56332993586 60.412 2 -0.47366742053589417 0.13046388647165139 0.9438714419765777 ['ENSG00000181631|ENST00000325602|P2RY13', 'nc|ENSG00000181631|Q9BPV8-2|P2RY13', 'P2RY13|p.F268Lfs*48|1|0.31|ENSG00000181631|chr3:151328252-151328252|A/-|frameshift_variant'] 53222 19435 KTDLSRESI True PC9_epitope_Rep5 1047.55603806431 1047.5549499358601 79.807 2 -0.4737330557118383 0.13047625422537568 0.9438714419765777 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 111975 9066 TLSIETEVVSI True H1975_Epitope_Rep2 1189.64418436237 1189.6425449037902 39.826 3 -0.47376577710595513 0.13047625422537568 0.9438714419765777 ['ENSG00000188996|ENST00000380907|HUS1B'] 45954 4689 ISSNNSNPK True NCI_RA007_Epitope_Rep5 959.46722305991 959.46612993586 24.723 2 -0.4738329863742782 0.13049080473234156 0.9438714419765777 ['nc|ENSG00000170956|P40198-2|CEACAM3'] 39247 19884 HLLGPCLALS True PC9_epitope_Rep5 1022.55828699378 1022.55718993586 81.536 2 -0.473943412822783 0.13055118637261137 0.9438714419765777 ['ENST00000527820.5_1_11:75164008-75167814:-|nuORF'] 45830 16436 ISPTQTQLL True PC9_epitope_Rep5 999.5600608155898 999.55896993586 68.219 2 -0.47394534713095693 0.13055118637261137 0.9438714419765777 ['ENST00000450253.6_1_4:99801895-99802249:-|nuORF'] 39909 14121 HQLESILAM-[Oxidation] True PC9_epitope_Rep5 1056.5273811687598 1056.5262899358602 59.327 2 -0.4739498915408015 0.13055118637261137 0.9438714419765777 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 66943 19217 LSYMEKLWL True PC9_epitope_Rep5 1181.6154675167297 1181.6143699358602 78.959 2 -0.47403074184057814 0.13056136534761148 0.9438714419765777 ['ZBBX|p.P633Lfs*57|1|0.26|ENSG00000169064|chr3:167282477-167282477|G/-|frameshift_variant', 'nc|ENSG00000169064|A8MT70-3|ZBBX', 'nc|ENSG00000169064|A8MT70|ZBBX', 'ENSG00000169064|ENST00000675490|ZBBX'] 79479 10984 PGPSASSLL True PC9_epitope_Rep2 827.43888305375 827.43778993586 47.572 2 -0.4740392493840453 0.13056136534761148 0.9438714419765777 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 72749 19185 NACVDKFTTL True PC9_epitope_Rep5 1110.53794547202 1110.5368499358601 78.833 2 -0.474058953698058 0.13056136534761148 0.9438714419765777 ['ENSG00000158125|ENST00000379416|XDH'] 18128 9494 EIMAPCLI True H1975_Epitope_Rep2 888.44489703432 888.44378993586 41.487 2 -0.4741146068472395 0.13057591272629923 0.9438714419765777 ['ENST00000379997.7_1_9:27561302-27561452:-|nuORF'] 93265 17882 RRRRVPGRE True NCI_RA007_Epitope_Rep5 1180.7013543720798 1180.70024993586 75.577 2 -0.47414383843222413 0.13062392290059732 0.9438714419765777 ['ENST00000354336.7_1_22:21271864-21272434:+|nuORF'] 96131 8562 SEDWLEPP True NCI_RA007_Epitope_Rep2 971.4236269124299 971.42252993586 37.948 2 -0.47425567213154773 0.1306886628296078 0.9438714419765777 ['ENSG00000164077|ENST00000296473|MON1A', 'nc|ENSG00000164077|Q86VX9|MON1A'] 9184 20820 AVPDLYFENA True PC9_epitope_Rep3 1137.53423999057 1137.5331499358601 85.355 2 -0.4742698426337496 0.1307032073482909 0.9438714419765777 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 101581 20637 SPDWEPMLGL True PC9_epitope_Rep6 1143.52704643515 1143.5259499358601 92.116 2 -0.4745235808030094 0.13080719364282728 0.9438714419765777 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 105118 11203 STLPKSLSL True PC9_epitope_Rep1 944.55424715916 944.55314993586 47.974 2 -0.47452607155466564 0.13080719364282728 0.9438714419765777 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 64711 12157 LRMFFDCLY True H1975_Epitope_Rep1 1206.55657274162 1206.5554699358602 51.78 2 -0.4745263464408469 0.13080719364282728 0.9438714419765777 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 124731 5661 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 28.381 3 -0.4745343433851371 0.13080719364282728 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 85406 12645 QLEIFHLVMYR True H1975_Epitope_Rep1 1447.7645913619099 1447.7634899358602 53.691 2 -0.4745739458263447 0.13080719364282728 0.9438714419765777 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 63308 10710 LPDAKAKSPP True H1975_Epitope_Rep3 1022.5760452328999 1022.57494993586 46.273 2 -0.4745875048625021 0.13080719364282728 0.9438714419765777 ['ENSG00000161031|ENST00000340880|PGLYRP2', 'nc|ENSG00000161031|Q96PD5-2|PGLYRP2'] 75307 9531 NPTLTKGATV True H1975_Epitope_Rep3 1000.55530978832 1000.55420993586 41.669 2 -0.4746187550882677 0.13082173447537473 0.9438714419765777 ['ENSG00000162928|ENST00000295030|PEX13'] 57645 10314 LELWREDIR True H1975_Epitope_Rep1 1228.65642081192 1228.6553299358602 44.62 2 -0.4746857275587003 0.13085300366361644 0.9438714419765777 ['ENST00000568469.5_1_16:18995385-19051723:+|nuORF', 'ENSG00000170537|ENST00000304381|TMC7', 'nc|ENSG00000170537|Q7Z402-2|TMC7'] 11214 7409 DELTVPRYRTE True NCI_RA007_Epitope_Rep1 1377.6888431390096 1377.68719490379 32.816 3 -0.47473059869291795 0.13088427180568102 0.9438714419765777 ['ENSG00000277363|ENST00000617146|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-2|SRCIN1'] 3745 6290 AGSYNNSM True PC9_epitope_Rep3 842.32286732534 842.32176993586 29.227 2 -0.47474301239123745 0.13089881061911374 0.9438714419765777 ['ENST00000555392.1_1_14:74423051-74423234:+|nuORF'] 65226 16126 LSEDQYFV True PC9_epitope_Rep2 999.4549270407099 999.45382993586 67.285 2 -0.47480049016373943 0.13090677951926133 0.9438714419765777 ['nc|ENSG00000141441|Q9H706-2|GAREM1', 'nc|ENSG00000141441|Q9H706-3|GAREM1', 'ENSG00000141441|ENST00000269209|GAREM1'] 33489 21698 GLGSLFYLTL True PC9_epitope_Rep1 1082.6011973515801 1082.60010993586 88.291 2 -0.47483495277626825 0.13090677951926133 0.9438714419765777 ['chr3:186636228-186640460|232|26.12|0.55|5.57|+|ENST00000450521|FETUB,FETUB', 'ENSG00000090512|ENST00000265029|FETUB', 'FETUB|p.G202Afs*9|1|0.18|ENSG00000090512|chr3:186646256-186646256|C/-|frameshift_variant'] 78877 13128 PETEDVQGLYM True H1975_Epitope_Rep1 1280.55946876224 1280.5583699358601 55.59 2 -0.4748360744609205 0.13090677951926133 0.9438714419765777 ['ENST00000561017.1_1_15:80414070-80415156:+|nuORF'] 86740 19169 QRLENEMASI True PC9_epitope_Rep4 1189.5761218858897 1189.57447490379 81.831 3 -0.474848559312993 0.13090677951926133 0.9438714419765777 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 47179 6667 IYAANRHVKK True NCI_RA007_Epitope_Rep1 1198.69347502698 1198.69183490379 29.944 3 -0.47491316459740046 0.13095477050715912 0.9438714419765777 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 30219 7746 FYYSPSGK True NCI_RA007_Epitope_Rep1 947.4388830537498 947.43778993586 34.123 2 -0.47492769934543766 0.13096930668227816 0.9438714419765777 ['ENSG00000071655|ENST00000434436|MBD3'] 28439 13277 FSEFSLLIT True PC9_epitope_Rep1 1055.5539128059897 1055.55280993586 55.934 2 -0.47504414936494704 0.13103182966196664 0.9438714419765777 ['ENST00000517490.5_1_8:87572425-87572653:+|nuORF'] 135807 23673 YEPNFIFF True PC9_epitope_Rep2 1075.5014833103098 1075.50038993586 96.533 2 -0.47506160774053346 0.13103182966196664 0.9438714419765777 ['ENSG00000087365|ENST00000322535|SF3B2'] 55362 23909 LASLQMQYTF True PC9_epitope_Rep2 1200.5848956644397 1200.58378993586 97.444 2 -0.47510268396128275 0.13106308958319396 0.9438714419765777 ['ENST00000463727.1_1_10:129868414-129869560:+|nuORF'] 61121 5240 LLDDQEAKR True NCI_RA007_Epitope_Rep2 1086.5669371011797 1086.5658499358601 25.003 2 -0.475145251185885 0.13107543067402574 0.9438714419765777 ['ENSG00000168259|ENST00000457167|DNAJC7', 'ENST00000316603.11_1_17:40149247-40169434:-|nuORF'] 35536 17301 GTIGLIHAI True PC9_epitope_Rep2 893.53345214493 893.53234993586 71.808 2 -0.4751700696252658 0.13107543067402574 0.9438714419765777 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000563635.5_1_13:76123956-76287321:+|nuORF'] 89943 23825 RFWKLILLTWL True PC9_epitope_Rep5 1487.9016768880697 1487.90002490379 96.624 3 -0.47519986105321504 0.1310899633724139 0.9438714419765777 ['ENST00000465952.5_1_13:31205167-31205455:+|nuORF'] 108289 13363 TECKPQSQSL True PC9_epitope_Rep1 1119.52302368387 1119.52192993586 56.26 2 -0.47522541143454033 0.13111902731088923 0.9438714419765777 ['ENST00000370491.7_1_1:89435115-89458421:-|nuORF', 'ENST00000321792.5_1_1:89449705-89458421:-|nuORF', 'ENST00000260508.8_1_1:89453981-89458544:-|nuORF'] 1990 7190 AEKLERQLALP True NCI_RA007_Epitope_Rep3 1266.72958575218 1266.7284899358601 35.394 2 -0.47524861229101745 0.13111902731088923 0.9438714419765777 ['ENSG00000105373|ENST00000246802|NOP53', 'ENST00000598681.5_1_19:48248882-48259836:+|nuORF', 'ENST00000565166.2_1_15:95399162-95399906:+|nuORF'] 15176 16475 EAEVLFTP True H1975_Epitope_Rep2 904.4541987647199 904.45310993586 68.588 2 -0.4752931125529824 0.1311458960465583 0.9438714419765777 ['KANK4|p.Q729Rfs*30|1|0.31|ENSG00000132854|chr1:62268333-62268333|G/-|frameshift_variant', 'ENSG00000132854|ENST00000371153|KANK4'] 45673 6894 ISKFRHQNI True NCI_RA007_Epitope_Rep4 1141.6356257976902 1141.63399490379 33.136 3 -0.4753010671963173 0.1311458960465583 0.9438714419765777 ['nc|ENSG00000062524|P29376-4|LTK', 'ENSG00000062524|ENST00000263800|LTK', 'ENST00000563518.5_1_15:41796702-41799561:-|nuORF', 'nc|ENSG00000062524|P29376-5|LTK'] 125469 9760 VLVASYTHF True NCI_RA007_Epitope_Rep2 1035.53893144819 1035.5378299358601 42.585 2 -0.4753123595705034 0.1311458960465583 0.9438714419765777 ['nc|ENSG00000204936|Q8N6Q3|CD177', 'ENSG00000204936|ENST00000618265|CD177'] 77828 9316 PAGAAWAGP True PC9_epitope_Rep3 796.3867879112398 796.38568993586 40.774 2 -0.47533900125754414 0.13115823271681326 0.9438714419765777 ['ENSG00000170162|ENST00000326274|VGLL2'] 80568 15638 PLNFSANFLP True H1975_Epitope_Rep3 1118.5760452329 1118.57494993586 65.568 2 -0.4753547348569567 0.13115823271681326 0.9438714419765777 ['ENST00000532986.1_1_11:62339151-62341470:-|nuORF'] 16689 13113 EEVEVQFSAGR True PC9_epitope_Rep1 1249.5938801250097 1249.59278993586 55.306 2 -0.47539962152082127 0.13116618173305242 0.9438714419765777 ['ENSG00000156017|ENST00000376834|CARNMT1'] 15112 4178 EAEAAYREKN True H1975_Epitope_Rep3 1179.5520153130299 1179.55090993586 21.189 2 -0.475413903158633 0.13116618173305242 0.9438714419765777 ['ENSG00000091010|ENST00000646991|POU4F3'] 73407 17150 NESAVIVAP True PC9_epitope_Rep3 898.4759968384599 898.47544496793 71.123 1 -0.4754264747704939 0.13116618173305242 0.9438714419765777 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 18341 10173 EIWEKFDP True PC9_epitope_Rep1 1062.5022115862998 1062.50110993586 44.007 2 -0.47544901556827895 0.13116618173305242 0.9438714419765777 ['SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A'] 117953 8583 VARPAPVAV True PC9_epitope_Rep2 878.5337864980999 878.53268993586 38.374 2 -0.4755441695015091 0.1311807099978262 0.9438714419765777 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 129035 6954 VTAFQGKG True NCI_RA007_Epitope_Rep3 806.4286527232199 806.42754993586 34.46 2 -0.47572377992208736 0.1312788442244666 0.9438714419765777 ['ENSG00000175073|ENST00000310421|VCPIP1'] 62426 12058 LLSDNVHFVP True NCI_RA007_Epitope_Rep1 1139.59750895347 1139.59640993586 50.891 2 -0.47573992809819204 0.1313078955288767 0.9438714419765777 ['DSG1|p.G547V|1|0.54|ENSG00000134760|chr18:31339978-31339978|G/T|missense_variant'] 58867 8438 LFSKYLVN True NCI_RA007_Epitope_Rep4 982.5487678559 982.54766993586 39.272 2 -0.47578610850963293 0.1313078955288767 0.9438714419765777 ['ENST00000503562.1_1_4:24541566-24543501:-|nuORF'] 77867 6840 PAGPEEEPP True H1975_Epitope_Rep2 921.4079768482899 921.4074249679301 31.226 1 -0.47587407084426847 0.13133694489031567 0.9438714419765777 ['ENSG00000145743|ENST00000542267|FBXL17'] 31297 7832 GDVVLKDVS True NCI_RA007_Epitope_Rep2 930.5022115863 930.50110993586 35.093 2 -0.47588131718830534 0.13133694489031567 0.9438714419765777 ['ENST00000422086.5_2_22:21362941-21363382:-|nuORF', 'ENST00000442739.1_1_22:21357241-21363382:-|nuORF'] 16991 9837 EGIDKGQLP True NCI_RA007_Epitope_Rep5 955.4974605590298 955.49636993586 44.482 2 -0.47598205951707717 0.13140162851744722 0.9438714419765777 ['ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4'] 68116 11323 LTPEQLEAV True H1975_Epitope_Rep2 998.5284263341399 998.5273299358599 48.603 2 -0.4761199091614879 0.13143067328752236 0.9438714419765777 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000534191.1_1_11:828562-829184:+|nuORF', 'ENST00000530737.2_1_11:828562-829423:+|nuORF'] 10199 7483 CDGYVCYEPG True NCI_RA007_Epitope_Rep3 1104.389232633 1104.3881299358602 36.556 2 -0.4762052463972044 0.13143067328752236 0.9438714419765777 ['ZFP42|p.I178*|1|0.45|ENSG00000179059|chr4:188003333-188003333|C/-|frameshift_variant', 'ENSG00000179059|ENST00000326866|ZFP42'] 64784 10136 LRSWWPRWWWA True NCI_RA007_Epitope_Rep4 1628.8153214951599 1628.81422993586 45.846 2 -0.4762461178730046 0.13143860235726823 0.9438714419765777 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 20865 5708 EQRERERWQR True H1975_Epitope_Rep1 1471.7392560024298 1471.73761490379 27.024 3 -0.4762564397222329 0.13143860235726823 0.9438714419765777 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 75696 18389 NQVALPNI True PC9_epitope_Rep2 867.48141657207 867.48030993586 76.065 2 -0.4762852172889851 0.13143860235726823 0.9438714419765777 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 100548 21024 SLPVFAAV True PC9_epitope_Rep2 802.4588902223398 802.4583449679301 86.322 1 -0.4762957374678822 0.13143860235726823 0.9438714419765777 ['ENSG00000188897|ENST00000696174|unknown', 'ENST00000595170.1_3_16:11556095-11569480:-|nuORF'] 48952 5801 KEYHFHTHREL True NCI_RA007_Epitope_Rep5 1495.7320453636696 1495.7303849037899 29.0 3 -0.4763560824317739 0.13145312291025812 0.9438714419765777 ['ENST00000394480.6_1_15:88690622-88799253:-|nuORF'] 128656 16423 VSLQKEAGV True PC9_epitope_Rep3 929.5181960036099 929.51708993586 68.306 2 -0.4764346781973858 0.1314676429777488 0.9438714419765777 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16'] 45999 8927 ISTKRYER True PC9_epitope_Rep1 1051.5774422152301 1051.5763499358602 39.18 2 -0.4764603271413612 0.1314821625597646 0.9438714419765777 ['CEP135|p.E1103K|2|0.2|ENSG00000174799|chr4:56020767-56020767|G/A|missense_variant'] 44040 6182 ILLAWDRDCCK True NCI_RA007_Epitope_Rep1 1334.6475130043398 1334.6464099358602 28.082 2 -0.4765656512979355 0.1315248458105601 0.9438714419765777 ['ENST00000173527.5_1_5:128440697-128440899:+|nuORF'] 46059 14565 ISWQLRVH True PC9_epitope_Rep1 1037.57704829241 1037.57594993586 60.849 2 -0.4766111998887868 0.1315248458105601 0.9438714419765777 ['PAPPA2|p.S568R|1|0.44|ENSG00000116183|chr1:176595308-176595308|C/A|missense_variant'] 41962 15582 IEDDALNGAI True PC9_epitope_Rep2 1029.4978544818498 1029.4967499358602 65.21 2 -0.4766293332307373 0.1315248458105601 0.9438714419765777 ['ENST00000511499.5_1_4:175413109-175416797:-|nuORF', 'nc|ENSG00000164120|P15428-3|HPGD', 'nc|ENSG00000164120|P15428-5|HPGD', 'ENSG00000164120|ENST00000296522|HPGD'] 74330 11826 NINHGSFIYL True PC9_epitope_Rep1 1176.5927579262 1176.59110490379 50.354 3 -0.4766369025930688 0.1315248458105601 0.9438714419765777 ['ENSG00000204740|ENST00000454679|MALRD1'] 54937 10626 LAGVRVRTV True PC9_epitope_Rep2 969.6083484206899 969.60724993586 46.186 2 -0.47663886500058256 0.1315248458105601 0.9438714419765777 ['ENSG00000179051|ENST00000375436|RCC2'] 129568 18066 VTGIPPFPP True PC9_epitope_Rep3 923.5116540711899 923.51054993586 74.688 2 -0.4766412694205984 0.1315248458105601 0.9438714419765777 ['ENST00000368921.4_1_1:151040175-151040232:+|nuORF'] 69773 17885 LWQFIRQWPPG True NCI_RA007_Epitope_Rep5 1426.7509899030997 1426.7498899358602 75.589 2 -0.4766432700493137 0.1315248458105601 0.9438714419765777 ['nc|ENSG00000137868|Q9BX79-5|STRA6'] 116975 20710 TYPNTYIF True PC9_epitope_Rep2 1017.48074786573 1017.4801749679301 85.097 1 -0.47665952768505054 0.1315248458105601 0.9438714419765777 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 54533 9821 LAALCQFGLLP True PC9_epitope_Rep1 1144.63145193404 1144.63034993586 42.638 2 -0.47666552163267867 0.1315248458105601 0.9438714419765777 ['ENSG00000145248|ENST00000273861|SLC10A4'] 13399 8630 DNIYRQPP True H1975_Epitope_Rep1 1001.4930438849299 1001.49194993586 38.123 2 -0.4766733158481879 0.1315248458105601 0.9438714419765777 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant'] 115833 8531 TVMLTFFFPG True NCI_RA007_Epitope_Rep5 1158.5783537320199 1158.5772499358602 39.499 2 -0.4766843496579982 0.1315248458105601 0.9438714419765777 ['ENST00000492633.5_1_1:60370173-60378128:-|nuORF'] 138275 10622 YQVYRSWWLWR True NCI_RA007_Epitope_Rep2 1641.8204664452498 1641.81883490379 45.916 3 -0.47672334189938637 0.13155167803182244 0.9438714419765777 ['ENST00000355622.6_1_9:120474773-120474821:+|nuORF'] 124730 4959 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 25.542 3 -0.4767335129726585 0.13155167803182244 0.9438714419765777 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 21652 8666 ERTSFNYAM-[Oxidation] True PC9_epitope_Rep5 1133.4811592523297 1133.48006993586 38.277 2 -0.4767723474692899 0.13155167803182244 0.9438714419765777 ['nc|ENSG00000181019|P15559-2|NQO1', 'ENSG00000181019|ENST00000320623|NQO1', 'nc|ENSG00000181019|P15559-3|NQO1', 'ENST00000569118.1_1_16:69751908-69760342:-|nuORF'] 137522 11251 YLQLQEAF True NCI_RA007_Epitope_Rep4 1010.5072969667398 1010.50618993586 50.168 2 -0.47688761337173724 0.1315719108258966 0.944053068912731 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENSG00000170379|ENST00000684770|TCAF2', 'nc|ENSG00000170379|A6NFQ2-3|TCAF2'] 32885 17374 GILSVDLL True PC9_epitope_Rep1 828.49566965388 828.49456993586 71.637 2 -0.47689914268590156 0.1315719108258966 0.9440996167825108 ['ENSG00000211448|ENST00000438257|DIO2', 'nc|ENSG00000211448|Q92813-2|DIO2', 'ENST00000438257.8_2_14:80669457-80677836:-|nuORF'] 46390 10113 ITIGETPPP True H1975_Epitope_Rep3 923.4963979298699 923.49530993586 43.941 2 -0.4769130137037239 0.1315719108258966 0.9441555866244086 ['CNGA2|p.T336I|1|0.92|ENSG00000183862|chrX:151743510-151743510|C/T|missense_variant'] 71221 17766 MFVFKDRWFWR True PC9_epitope_Rep1 1616.8074592333996 1616.8063699358602 73.134 2 -0.4769876390897332 0.1315719108258966 0.9444561017530798 ['ENSG00000125966|ENST00000246186|MMP24'] 128937 16455 VSTVNERFDV True PC9_epitope_Rep5 1164.57750178488 1164.57640993586 68.292 2 -0.4770510975821359 0.1315719108258966 0.9447108635384796 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'ENST00000479272.1_1_1:149906082-149907243:-|nuORF', 'nc|ENSG00000014914|A4FU01-3|MTMR11', 'ENST00000466496.5_1_1:149902724-149908701:-|nuORF', 'nc|ENSG00000014914|A4FU01-2|MTMR11', 'ENST00000492824.5_1_1:149905714-149908540:-|nuORF', 'nc|ENSG00000014914|A4FU01-5|MTMR11', 'ENST00000482343.5_1_1:149902724-149908540:-|nuORF', 'nc|ENSG00000014914|A4FU01-6|MTMR11'] 54019 7911 KYLLHRGLP True NCI_RA007_Epitope_Rep3 1095.6552986131098 1095.65420993586 38.228 2 -0.477055319466299 0.1315719108258966 0.944727787571722 ['nc|ENSG00000165816|Q5GFL6-2|VWA2', 'ENSG00000165816|ENST00000392982|VWA2'] 31959 13719 GESPMPFK True PC9_epitope_Rep1 891.41603943419 891.41494993586 57.619 2 -0.4770870816187112 0.1315842245989305 0.9448550108094564 ['nc|ENSG00000149488|Q8TDI7-4|TMC2'] 129458 19025 VTEMRRTL True PC9_epitope_Rep5 1004.5436995587999 1004.54260993586 78.206 2 -0.4770880828639282 0.1315842245989305 0.9448590184370371 ['nc|ENSG00000105325|Q9UM11-3|FZR1', 'ENSG00000105325|ENST00000441788|FZR1', 'nc|ENSG00000105325|Q9UM11|FZR1', 'ENST00000588327.1_1_19:3506419-3526183:+|nuORF'] 19678 9078 ELSAKLALSI True NCI_RA007_Epitope_Rep4 1043.62266107215 1043.6215699358602 41.752 2 -0.47711119238962707 0.13161544760281413 0.9449514693499492 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 91010 5850 RLKHKLVLL True PC9_epitope_Rep4 1118.7651834152598 1118.76408993586 29.372 2 -0.47718256031991335 0.13162995889174828 0.9452364019531707 ['ENST00000420737.1_1:146011237-146016889:+|nuORF'] 61630 17206 LLHEARRYHI True PC9_epitope_Rep5 1306.72583778442 1306.72474993586 71.202 2 -0.4773134154404252 0.13171131126447538 0.945756614308084 ['ENSG00000114796|ENST00000242810|KLHL24', 'nc|ENSG00000114796|Q6TFL4-2|KLHL24', 'KLHL24-CEP89|1|fusion'] 68082 10423 LTPCCQYYINE True H1975_Epitope_Rep1 1345.5682596241297 1345.5671699358602 45.045 2 -0.47735963451962926 0.13174253057950672 0.9459396885491065 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|43|2|sense'] 124718 4861 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 26.106 3 -0.4773788337824283 0.13175263588818154 0.9460156364963929 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 64943 12381 LSCHVHMLVP True H1975_Epitope_Rep2 1134.56780613166 1134.5667099358602 52.71 2 -0.4773800669898626 0.13175263588818154 0.946020512784233 ['ENST00000501855.6_1_5:180257966-180258903:+|nuORF'] 82122 16561 PTDATGFIN True PC9_epitope_Rep5 934.4396113297399 934.4390649679301 68.707 1 -0.47740673881063705 0.13175263588818154 0.946125918340526 ['ENST00000372386.6_1_9:133355254-133376405:+|nuORF', 'ENSG00000130707|ENST00000352480|ASS1'] 74835 9621 NLPNVNLPKVP True H1975_Epitope_Rep3 1203.6975573479099 1203.69646993586 42.022 2 -0.4775638565928745 0.1317983592039967 0.9467446025860896 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS'] 20228 4247 ENVKANIQDK True NCI_RA007_Epitope_Rep2 1157.6040508858898 1157.6029499358601 21.159 2 -0.47757009956179997 0.1317983592039967 0.9467691082789224 ['UBC|p.K561N|1|0.28|ENSG00000150991|chr12:124912089-124912089|C/G|missense_variant'] 33882 7365 GLWIWRYQEKK True NCI_RA007_Epitope_Rep1 1505.8143184356497 1505.81266490379 32.643 3 -0.4775824591694272 0.13181286549707602 0.9468176066993711 ['ENSG00000206190|ENST00000555815|ATP10A'] 441 6612 AALQVHQPP True PC9_epitope_Rep3 959.5188647099499 959.51776993586 30.458 2 -0.47770200462767304 0.13188538969175506 0.9472855441908808 ['ENST00000596769.1_1_19:53510963-53514048:+|nuORF'] 59782 5737 LHAAEQESL True PC9_epitope_Rep4 996.4876241513201 996.48652993586 28.894 2 -0.4777224719116789 0.13188538969175506 0.947365453787394 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B', 'ENST00000518168.5_1_5:179228470-179228931:-|nuORF', 'ENST00000520134.1_1_5:179228412-179228937:-|nuORF'] 80994 21367 PNLVAVCLAA True PC9_epitope_Rep1 969.5317378927699 969.53064993586 87.02 2 -0.47773143680712565 0.13188538969175506 0.9474004364797431 ['ENSG00000153815|ENST00000537098|CMIP', 'nc|ENSG00000153815|Q8IY22-2|CMIP', 'nc|ENSG00000153815|Q8IY22-3|CMIP'] 61994 10772 LLLQPHWWLC True H1975_Epitope_Rep2 1307.68488448923 1307.6832449037902 46.464 3 -0.4777444523858347 0.13188538969175506 0.9474512056427798 ['ENST00000592836.5_1_2:179400536-179402981:+|nuORF', 'ENST00000592689.5_1_2:179400536-179404864:+|nuORF'] 60503 21039 LINPDIKVV True PC9_epitope_Rep2 1009.61718176889 1009.61608993586 86.379 2 -0.477756365616855 0.13188538969175506 0.9474976542119943 ['ENST00000473565.5_1_2:201718031-201724542:-|nuORF', 'ENST00000461981.5_1_2:201718031-201721754:-|nuORF', 'ENSG00000013441|ENST00000321356|CLK1', 'nc|ENSG00000013441|P49759-3|CLK1'] 114787 15188 TTAPSGIVNV True PC9_epitope_Rep5 957.51311062317 957.51200993586 63.427 2 -0.4777685053238174 0.13189548598349427 0.947544965506139 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 114141 11363 TRSNPLSL True PC9_epitope_Rep5 886.4872302284999 886.48612993586 48.705 2 -0.47778477350427423 0.13189548598349427 0.9476083344923429 ['ENSG00000149346|ENST00000334534|SLX4IP', 'SLX4IP|p.E69K|1|0.12|ENSG00000149346|chr20:10560787-10560787|G/A|missense_variant'] 78092 10046 PAMIPLWMFP True NCI_RA007_Epitope_Rep1 1201.6027946580498 1201.6016899358601 43.086 2 -0.4778056813940208 0.13189548598349427 0.947689723021961 ['ENST00000554231.5_1_14:74537838-74551097:-|nuORF', 'nc|ENSG00000119711|Q02252-2|ALDH6A1', 'ENSG00000119711|ENST00000553458|ALDH6A1'] 95151 12954 SAAAVCGMSTI True PC9_epitope_Rep5 1009.45725262317 1009.45614993586 54.837 2 -0.4778490848959937 0.13190998847291135 0.9478584908814769 ['ENST00000330137.11_1_17:57232507-57232597:-|nuORF'] 15935 9727 EDSNNNVP True PC9_epitope_Rep1 887.36208928503 887.36098993586 42.272 2 -0.4778535991640223 0.13192228663069444 0.9478760293450902 ['ENSG00000111727|ENST00000229330|HCFC2', 'nc|ENSG00000111727|Q9Y5Z7-2|HCFC2'] 118143 18736 VAVFGNQLGI True PC9_epitope_Rep2 1016.5654805491997 1016.56438993586 77.446 2 -0.4778586939893028 0.13192228663069444 0.9478958200660623 ['ENSG00000119686|ENST00000238667|FLVCR2'] 107552 4354 TADTTTHVTP True H1975_Epitope_Rep2 1042.49310345458 1042.49200993586 21.863 2 -0.4778965812558898 0.13195128877603862 0.9480428839058014 ['nc|ENSG00000182871|P39060-1|COL18A1', 'nc|ENSG00000182871|P39060|COL18A1'] 115102 15706 TTVKEQAFTI True PC9_epitope_Rep3 1136.607739284 1136.60664993586 65.562 2 -0.4779087823536206 0.13195128877603862 0.9480902035413714 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2'] 75004 13799 NLYRCQVYARS True H1975_Epitope_Rep3 1371.67175360623 1371.6706499358602 58.382 2 -0.47799051557844524 0.1319780843884676 0.9484066922762994 ['ENSG00000159915|ENST00000683810|ZNF233'] 111423 7925 TLKIQPAE True NCI_RA007_Epitope_Rep4 898.5123823471799 898.51128993586 37.227 2 -0.4779959358637332 0.1319780843884676 0.9484276505613923 ['nc|ENSG00000276597|A0A5A6|TRBV11-3', 'nc|ENSG00000211720|A0A0K0K1C0|TRBV11-1'] 68354 12970 LTSKMTTDEL True PC9_epitope_Rep1 1137.5587404862501 1137.55708490379 54.761 3 -0.4780026044647078 0.1319780843884676 0.9484534305391974 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 86006 7882 QPIQTVQP True H1975_Epitope_Rep2 909.4919812557698 909.49088993586 35.264 2 -0.47809202740620793 0.13200928725341174 0.9487985932257577 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'LATS1|p.G535Efs*6|1|0.37|ENSG00000131023|chr6:149683485-149683485|C/-|frameshift_variant', 'nc|ENSG00000131023|O95835-2|LATS1', 'LATS1|p.D881Gfs*40|1|0.26|ENSG00000131023|chr6:149676689-149676690|-/C|frameshift_variant', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF'] 28524 9367 FSHCCLNP True H1975_Epitope_Rep2 919.36804369595 919.36694993586 40.992 2 -0.4781170255059138 0.13203387282657714 0.9488949080046636 ['CX3CR1|p.V281F|2|0.32|ENSG00000168329|chr3:39265669-39265669|C/A|missense_variant', 'ENSG00000168329|ENST00000399220|CX3CR1', 'nc|ENSG00000168329|P49238-3|CX3CR1', 'nc|ENSG00000168329|P49238-4|CX3CR1', 'nc|ENSG00000168329|P49238-2|CX3CR1'] 56262 12892 LDQFLDKMDDP True H1975_Epitope_Rep2 1335.6016679273898 1335.6005699358602 54.702 2 -0.4781854905393169 0.13203387282657714 0.9491583143152026 ['ENSG00000261236|ENST00000569669|BOP1', 'nc|ENSG00000261236|Q14137-2|BOP1', 'ENST00000529231.1_8:145488904-145515052:-|nuORF'] 59989 15228 LHPVSAIISL True PC9_epitope_Rep2 1048.62808080576 1048.6269899358601 63.839 2 -0.4782010975036881 0.13203387282657714 0.9492182821937408 ['ENST00000532485.5_1_11:76734550-76734952:+|nuORF'] 8457 3254 ATSSTLVSK True NCI_RA007_Epitope_Rep2 892.48656152216 892.48546993586 17.314 2 -0.47829707095925367 0.13203387282657714 0.949586437334145 ['ENST00000332782.6_1_12:57640633-57642538:-|nuORF'] 115837 13176 TVMNPYMKLAP True H1975_Epitope_Rep2 1263.63555133831 1263.6344499358602 55.806 2 -0.47843655402470303 0.13213188134687334 0.9501196935931165 ['ENSG00000084674|ENST00000233242|APOB'] 19617 11988 ELRQEEERRRR True NCI_RA007_Epitope_Rep1 1555.8291336359896 1555.82802993586 50.617 2 -0.47848215123872323 0.13214416942245383 0.9502935736356279 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000473525.1_1_X:70516758-70517827:+|nuORF'] 74572 12947 NLDGKSLVA True H1975_Epitope_Rep3 915.5025459394699 915.50199496793 55.031 1 -0.47849469373759357 0.13214416942245383 0.9503413661599471 ['nc|ENSG00000132932|Q9NTI2-1|ATP8A2', 'ENSG00000132932|ENST00000381655|ATP8A2', 'nc|ENSG00000132932|Q9NTI2-3|ATP8A2'] 14764 22899 DVYIYKPPVS True PC9_epitope_Rep1 1179.6175756917098 1179.61646993586 92.879 2 -0.4785871772127958 0.13215424954490038 0.9506932904254978 ['nc|ENSG00000162643|Q8IWG1-2|DNAI3', 'ENSG00000162643|ENST00000294664|DNAI3'] 45797 14309 ISNYAELV True H1975_Epitope_Rep3 907.4650978015899 907.46454496793 60.385 1 -0.4785885377830966 0.13215424954490038 0.950698461580291 ['nc|ENSG00000173482|P28827|PTPRM', 'ENSG00000173482|ENST00000580170|PTPRM'] 55766 13307 LDEEEDMVI True PC9_epitope_Rep2 1091.4692567755098 1091.46814993586 56.461 2 -0.47859535233143674 0.13215424954490038 0.9507243591648541 ['ENSG00000153936|ENST00000370550|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-2|HS2ST1', 'nc|ENSG00000153936|Q7LGA3-3|HS2ST1'] 62790 22256 LMDYDGSRRGL True PC9_epitope_Rep3 1281.6135700237699 1281.6124699358602 90.893 2 -0.47861009020882694 0.13216653584729204 0.9507803530536217 ['ENSG00000188070|ENST00000433688|ZFTA'] 121589 16517 VGLAELTSV True PC9_epitope_Rep6 887.49639792987 887.49530993586 75.968 2 -0.4786303800715991 0.13216653584729204 0.9508574073555248 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 26214 15616 FHVDLEREL True PC9_epitope_Rep4 1156.58767254576 1156.58602490379 67.989 3 -0.47866251803593074 0.13218102872411489 0.9509793788383909 ['ENSG00000023330|ENST00000484952|ALAS1'] 81567 24087 PRIRYRKKKRI True NCI_RA007_Epitope_Rep2 1512.9841181557597 1512.98248490379 101.2 3 -0.4790618649251168 0.1322768110617548 0.9524872324972405 ['nc|ENSG00000079263|Q13342-3|SP140', 'nc|ENSG00000079263|Q13342-6|SP140', 'nc|ENSG00000079263|Q13342-5|SP140', 'ENSG00000079263|ENST00000392045|SP140'] 84153 8114 QERFTQDTQP True H1975_Epitope_Rep2 1248.5734790335998 1248.5723899358602 36.16 2 -0.479182718228099 0.1322768110617548 0.9529404676216979 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 55753 9976 LDEAIRKVAT True NCI_RA007_Epitope_Rep3 1114.6346227381798 1114.63352993586 46.325 2 -0.4792064590494864 0.13227804772161833 0.953029314974932 ['GLYATL2|p.A261Qfs*11|1|0.1|ENSG00000156689|chr11:58834533-58834533|C/-|frameshift_variant', 'ENSG00000156689|ENST00000287275|GLYATL2'] 116347 14024 TVYDRTTVL True PC9_epitope_Rep4 1066.5658744720201 1066.56476993586 61.855 2 -0.4792209067127911 0.13227804772161833 0.953083352639748 ['ENSG00000188786|ENST00000373036|MTF1'] 117161 10363 TYSTEPNNL True PC9_epitope_Rep2 1037.46655435357 1037.46597496793 45.187 1 -0.4792219923920102 0.13227804772161833 0.9530874123785201 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28', 'nc|ENSG00000108107|P46779-4|RPL28', 'nc|ENSG00000108107|P46779-5|RPL28'] 78065 9466 PALQDPRRRR True NCI_RA007_Epitope_Rep2 1263.7272347667497 1263.7261299358602 41.431 2 -0.4792557124482312 0.13227804772161833 0.9532134363646837 ['ENST00000538906.5_2_16:31084355-31084742:-|nuORF'] 60254 9228 LIEATVIA True NCI_RA007_Epitope_Rep5 828.4956696538799 828.49456993586 42.146 2 -0.47927525431733636 0.13227804772161833 0.9532864111353014 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 56782 7354 LEATGEVQA True H1975_Epitope_Rep2 916.4501760134398 916.44962496793 33.227 1 -0.47933553726066813 0.13227804772161833 0.9535112401539655 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF'] 73401 17051 NESAVIVAP True PC9_epitope_Rep1 898.4759968384599 898.47544496793 70.412 1 -0.47936796635831913 0.13227804772161833 0.9536320053280306 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 65710 18255 LSHNLSLVI True PC9_epitope_Rep3 994.58113061334 994.58002993586 75.428 2 -0.4793794020454856 0.13232593087326766 0.9536745607664916 ['ENSG00000149131|ENST00000278407|SERPING1', 'nc|ENSG00000149131|P05155-3|SERPING1', 'ENST00000528996.1_1_11:57374185-57382051:+|nuORF', 'nc|ENSG00000149131|P05155-2|SERPING1'] 4459 7287 AKEKNWCHICK True H1975_Epitope_Rep1 1358.65874639438 1358.65764993586 33.042 2 -0.47938915336403715 0.13234041842680871 0.9537108353947863 ['ENST00000394205.7_2_4:141302621-141302744:+|nuORF'] 129397 20869 VTEGVIVPE True PC9_epitope_Rep1 941.5069626135698 941.50641496793 85.097 1 -0.4794207702658045 0.13235048585834974 0.9538283676277097 ['nc|ENSG00000147180|Q9Y462|ZNF711', 'nc|ENSG00000147180|Q9Y462-2|ZNF711', 'ENSG00000147180|ENST00000674551|ZNF711'] 132552 21610 VYPGYYLTF True PC9_epitope_Rep4 1121.54334812229 1121.54277496793 91.313 1 -0.47944745374787734 0.13235048585834974 0.9539274620820144 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF', 'ENST00000494760.1_1_2:9002596-9008596:-|nuORF'] 66087 3976 LSNNHQCK True NCI_RA007_Epitope_Rep2 942.4341491098199 942.43304993586 20.101 2 -0.4794599151910774 0.13235048585834974 0.9539737089396247 ['ZBTB41|p.I360Yfs*14|1|0.09|ENSG00000177888|chr1:197199396-197199396|T/-|frameshift_variant', 'nc|ENSG00000177888|Q5SVQ8-2|ZBTB41', 'ENST00000467322.1_1_1:197145142-197169603:-|nuORF', 'ENSG00000177888|ENST00000367405|ZBTB41'] 95018 14887 RYQQWMERF True PC9_epitope_Rep2 1342.6240751378198 1342.62296993586 62.528 2 -0.4794932600419256 0.13239836380332248 0.9540973593211381 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant', 'ENST00000480891.5_1_17:12896137-12909314:-|nuORF', 'ENST00000487229.6_1_17:12905763-12906899:-|nuORF'] 27978 22149 FQTDVGFGL True PC9_epitope_Rep5 982.4759968384599 982.47488993586 90.233 2 -0.4795679583947024 0.13247963136102578 0.9543738251049549 ['ENSG00000167131|ENST00000417826|CCDC103'] 9311 10198 AVSEGLLGK True H1975_Epitope_Rep3 872.4967322830399 872.49618496793 44.273 1 -0.479636450664546 0.13249411489724025 0.9546266555533929 ['ENSG00000143156|ENST00000367811|NME7', 'nc|ENSG00000143156|Q9Y5B8-2|NME7'] 38638 15185 HHLIVITSL True PC9_epitope_Rep4 1031.6127650947901 1031.6116699358602 66.333 2 -0.4796947370023772 0.13250859794984807 0.9548412944159699 ['nc|ENSG00000133318|O95197-5|RTN3'] 101398 15646 SNDGQFKLL True PC9_epitope_Rep3 1020.52400966004 1020.52290993586 65.329 2 -0.4797934071939759 0.13258985959698827 0.9552035241633491 ['ENSG00000158711|ENST00000357992|ELK4', 'nc|ENSG00000158711|P28324-2|ELK4'] 66794 12038 LSVLEMILP True H1975_Epitope_Rep1 1013.5831047592899 1013.58200993586 51.315 2 -0.4800192409560504 0.13260212684262365 0.9560269757672197 ['ENST00000359195.3_1_7:106505947-106508023:+|nuORF'] 61050 8096 LLASGVHL True PC9_epitope_Rep1 808.48068829608 808.47958993586 35.967 2 -0.4800336912793909 0.13260212684262365 0.9560793871758805 ['ENST00000267970.8_1_15:77338989-77339115:-|nuORF'] 41495 10523 ICNLPNNSL True PC9_epitope_Rep2 986.4855159763401 986.48440993586 45.798 2 -0.4801019995021262 0.13264999499181998 0.9563266695094129 ['ENSG00000204021|ENST00000404190|LIPK'] 2892 10842 AEYSNTWTP True H1975_Epitope_Rep3 1067.45598966987 1067.4554749679298 46.785 1 -0.48015115733870567 0.13267009414435468 0.9565041353053111 ['MORF4L1|p.V96Ffs*33|1|0.15|ENSG00000185787|chr15:78886152-78886152|G/-|frameshift_variant'] 20572 8408 EQEATGFHLP True H1975_Epitope_Rep2 1127.5247379360299 1127.52364993586 37.294 2 -0.48017079245759076 0.13267009414435468 0.9565749038028541 ['ENST00000526726.1_1_11:125479363-125482632:+|nuORF'] 40969 19492 HWVVTEDGKI True PC9_epitope_Rep1 1182.6033226098998 1182.6022299358601 79.794 2 -0.480177382581527 0.13267009414435468 0.9565986407249049 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 42121 19494 IEEQIVLV True PC9_epitope_Rep6 941.5433481222899 941.54224993586 87.645 2 -0.4802329154363048 0.13267009414435468 0.9567983603022442 ['ENSG00000144407|ENST00000272847|PTH2R'] 129156 13391 VTDDLVC[Carbamidomethyl]LVYK True H1975_Epitope_Rep1 1323.6744392242601 1323.6733499358602 56.619 2 -0.4802566092792655 0.13267009414435468 0.9568834063030583 ['ENSG00000143742|ENST00000304786|SRP9'] 58522 17833 LFAGKRAFSQK True PC9_epitope_Rep4 1251.7087907379498 1251.7076899358601 76.628 2 -0.480267390215134 0.13267009414435468 0.9569220696495094 ['ENSG00000184949|ENST00000535113|FAM227A', 'nc|ENSG00000184949|F5H4B4-2|FAM227A'] 15819 5626 EDKERWEDVK True NCI_RA007_Epitope_Rep1 1332.6309939097198 1332.62935490379 25.946 3 -0.48028921336821756 0.1326845716002604 0.9570002689276418 ['ENSG00000162889|ENST00000367103|MAPKAPK2', 'nc|ENSG00000162889|P49137-2|MAPKAPK2', 'ENST00000479009.1_1_1:206904950-206905282:+|nuORF'] 98719 17413 SIRPSWSSSTL True PC9_epitope_Rep3 1219.61970095003 1219.6186099358601 72.149 2 -0.480338256027601 0.13271352506217557 0.9571756865158543 ['ENST00000575712.5_1_17:79009028-79031686:+|nuORF'] 92716 5585 RRILILGKL True PC9_epitope_Rep2 1080.74953335112 1080.74842993586 26.872 2 -0.4804396517187718 0.13271352506217557 0.9575369391714689 ['ENSG00000090060|ENST00000216277|PAPOLA', 'nc|ENSG00000090060|P51003-2|PAPOLA', 'ENST00000554130.5_1_14:96968887-96993844:+|nuORF'] 5492 13778 AMPWFQFYL True NCI_RA007_Epitope_Rep5 1201.5630380210498 1201.5619499358602 59.672 2 -0.4804611123140776 0.13272578572263116 0.9576131481228364 ['nc|ENSG00000121101|Q8IWB6|TEX14'] 69711 16769 LWAFRKWKWYQ True NCI_RA007_Epitope_Rep4 1610.8510382975398 1610.8499499358602 72.686 2 -0.48046211983869863 0.13272578572263116 0.9576167237701673 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A'] 36736 7251 GVNPVREVKDL True NCI_RA007_Epitope_Rep5 1224.68263555976 1224.68098490379 34.567 3 -0.4804929949935457 0.1327547358758241 0.9577262023837854 ['nc|ENSG00000134243|Q99523-2|SORT1', 'ATP1A1-SORT1|2|fusion', 'ENSG00000134243|ENST00000256637|SORT1', 'ATP1A1-SORT1|3|fusion', 'ATP1A1-SORT1|1|fusion'] 75287 12443 NPSPYHLYY True H1975_Epitope_Rep1 1152.52400966004 1152.52290993586 52.899 2 -0.4805376221460742 0.1327547358758241 0.9578841136626799 ['ENSG00000020633|ENST00000308873|RUNX3', 'nc|ENSG00000020633|Q13761-2|RUNX3'] 1509 5346 AEEPQPSASP True H1975_Epitope_Rep2 1011.4509042894299 1011.44980993586 25.61 2 -0.4806457383428393 0.13278590026036452 0.9582650289471134 ['ENSG00000135631|ENST00000486777|RAB11FIP5'] 124742 8537 VLKKKKKKKK True PC9_epitope_Rep2 1254.92274668582 1254.9211049037901 38.199 3 -0.480708435230412 0.13284822590874196 0.9584848283036246 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 84367 14382 QGAGSVLF True PC9_epitope_Rep6 777.40210362221 777.4015549679301 67.218 1 -0.4807257247751934 0.13284822590874196 0.958545296908328 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 564 11456 AAREVKLL True PC9_epitope_Rep3 898.5600012459398 898.55890993586 49.063 2 -0.48081256784058385 0.13286269797560038 0.9588480636838993 ['ENSG00000114353|ENST00000313601|GNAI2', 'nc|ENSG00000114353|P04899-4|GNAI2', 'ENSG00000127955|ENST00000649796|GNAI1'] 66229 12172 LSPSTIVSIP True H1975_Epitope_Rep3 1012.580461907 1012.57936993586 51.99 2 -0.48086165501569533 0.13287716955941256 0.9590184809808905 ['ENSG00000144218|ENST00000672756|AFF3', 'nc|ENSG00000144218|P51826-2|AFF3'] 134978 11669 YAGCVSQLFF True NCI_RA007_Epitope_Rep5 1133.52156713189 1133.52046993586 51.538 2 -0.4809643229739564 0.13288942291645806 0.9593731979217521 ['nc|ENSG00000186268|Q8NGN7|OR10D4P'] 90789 24883 RKRRTVHINLL True PC9_epitope_Rep2 1404.8789843808797 1404.8778899358601 101.39 2 -0.4809851106678678 0.13288942291645806 0.9594447314064044 ['ENST00000494079.1_2_7:92205125-92206979:-|nuORF'] 80143 15264 PKPDVVVQVSI True PC9_epitope_Rep5 1179.6863239578697 1179.6852299358602 63.723 2 -0.48104812634460065 0.1329684266737868 0.9596609745778139 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 65984 16342 LSLSSETKPKL True PC9_epitope_Rep3 1201.69180326113 1201.69015490379 67.993 3 -0.4810562394812672 0.1329684266737868 0.9596887489696047 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF'] 90525 5669 RKEDNDEI True PC9_epitope_Rep6 1017.4727023631699 1017.47160993586 29.912 2 -0.48120318111683663 0.1329796109053292 0.9601891086750902 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 44368 13644 INALADAIN True NCI_RA007_Epitope_Rep4 913.48689587533 913.4863449679301 59.702 1 -0.48122214799837815 0.1329796109053292 0.9602533180965982 ['ENST00000465687.1_1_3:88367908-88368169:+|nuORF'] 124255 13126 VLDCLLDFLP True PC9_epitope_Rep3 1146.59948309942 1146.59838993586 55.512 2 -0.4812526855272628 0.1329796109053292 0.9603565143556153 ['nc|ENSG00000112773|Q96IP4-2|TENT5A', 'ENSG00000112773|ENST00000320172|TENT5A', 'ENSG00000174016|ENST00000308293|TENT5D'] 37481 7409 GYDNPSFLR True H1975_Epitope_Rep3 1067.50360856863 1067.5025099358602 33.476 2 -0.48129009219944263 0.1329796109053292 0.96048261229976 ['ENSG00000186908|ENST00000426126|ZDHHC17'] 100174 7823 SLLFFSLPSP True H1975_Epitope_Rep3 1106.60119735158 1106.60010993586 35.07 2 -0.4813029593386729 0.1329796109053292 0.9605259076203949 ['ENST00000531381.1_1_11:121972385-121972643:-|nuORF', 'ENST00000340957.9_1_3:184063152-184063416:+|nuORF'] 20411 10498 EPMQQLLDP True PC9_epitope_Rep6 1069.5113963710098 1069.51028993586 51.158 2 -0.48132073132450687 0.1329796109053292 0.9605856391617498 ['SYNDIG1|p.D104Tfs*38|1|0.15|ENSG00000101463|chr20:24543402-24543402|G/-|frameshift_variant', 'ENSG00000101463|ENST00000376862|SYNDIG1'] 12071 4728 DIENCVKWMVP True NCI_RA007_Epitope_Rep2 1332.62062955016 1332.61897490379 23.019 3 -0.4813903170741283 0.1329796109053292 0.960818755203166 ['nc|ENSG00000105173|P24864-2|CCNE1', 'nc|ENSG00000105173|P24864-3|CCNE1', 'ENSG00000105173|ENST00000262643|CCNE1'] 127344 6278 VQPFHKCK True NCI_RA007_Epitope_Rep2 985.5167565349699 985.51564993586 29.026 2 -0.48146643585526777 0.1329796109053292 0.9610723485783464 ['ENST00000592484.5_2_19:33668516-33668627:+|nuORF'] 100568 6858 SLQALTEMDGP True NCI_RA007_Epitope_Rep2 1160.53833939484 1160.53724993586 31.292 2 -0.4814670355502864 0.1329796109053292 0.9610743405741594 ['nc|ENSG00000080802|O95628-6|CNOT4', 'nc|ENSG00000080802|O95628-8|CNOT4', 'nc|ENSG00000080802|O95628-4|CNOT4', 'nc|ENSG00000080802|O95628-9|CNOT4', 'ENSG00000080802|ENST00000541284|CNOT4'] 61635 19742 LLHFITPPL True PC9_epitope_Rep5 1049.62735252977 1049.6262499358602 80.982 2 -0.481514918140299 0.1329796109053292 0.9612330895719213 ['ENSG00000135569|ENST00000258034|TAAR5'] 133116 5666 WAWRWRQR True NCI_RA007_Epitope_Rep5 1243.6475278940698 1243.64587490379 28.482 3 -0.4816005930295472 0.13302078814775267 0.961515630510978 ['ENST00000478401.1_1_9:100872512-100881310:-|nuORF', 'TRIM14|p.R13Gfs*64|1|0.21|ENSG00000106785|chr9:98119152-98119152|T/-|frameshift_variant'] 32554 14768 GGTTLVITGN True PC9_epitope_Rep3 931.4974605590301 931.49691496793 61.94 1 -0.48164683430631405 0.13302078814775267 0.9616673125262655 ['ENSG00000205038|ENST00000378402|PKHD1L1', 'PKHD1L1|p.G3595Efs*3|1|0.42|ENSG00000205038|chr8:109498726-109498726|G/-|frameshift_variant', 'PKHD1L1|p.S3970Mfs*9|1|0.26|ENSG00000205038|chr8:109518386-109518386|G/-|frameshift_variant', 'PKHD1L1|p.N2355Tfs*2|1|0.39|ENSG00000205038|chr8:109459652-109459652|A/-|frameshift_variant', 'PKHD1L1|p.V3282Lfs*8|1|0.21|ENSG00000205038|chr8:109486784-109486784|G/-|frameshift_variant', 'PKHD1L1|p.T1976Hfs*9|1|0.32|ENSG00000205038|chr8:109448285-109448286|-/G|frameshift_variant', 'PKHD1L1|p.G2014Vfs*4|1|0.38|ENSG00000205038|chr8:109449349-109449349|G/-|frameshift_variant'] 73002 5270 NDEDQVGAAK True NCI_RA007_Epitope_Rep3 1045.4676169827299 1045.4665099358601 27.735 2 -0.48165062261306646 0.13302078814775267 0.9616797134801812 ['nc|ENSG00000122884|P13674-3|P4HA1', 'nc|ENSG00000122884|P13674-2|P4HA1', 'ENSG00000122884|ENST00000394890|P4HA1'] 35033 9830 GRARAWAWT True NCI_RA007_Epitope_Rep3 1073.5518961737298 1073.5507899358602 45.74 2 -0.4816570841281279 0.13302078814775267 0.9617008561596395 ['nc|ENSG00000167483|Q86XR2-6|NIBAN3', 'nc|ENSG00000167483|Q86XR2-5|NIBAN3', 'nc|ENSG00000167483|Q86XR2-7|NIBAN3', 'nc|ENSG00000167483|Q86XR2-4|NIBAN3', 'ENSG00000167483|ENST00000599164|NIBAN3', 'nc|ENSG00000167483|Q86XR2-3|NIBAN3', 'nc|ENSG00000167483|Q86XR2-2|NIBAN3', 'nc|ENSG00000167483|Q86XR2|NIBAN3'] 10465 9847 CMSLHGGIDQY True H1975_Epitope_Rep3 1222.51107910118 1222.5099899358602 42.906 2 -0.48167518268907544 0.1330285943078309 0.9617600159725128 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000503946.1_1_5:134125872-134147057:+|nuORF'] 9820 15218 AYLKAIVLF True NCI_RA007_Epitope_Rep3 1036.6321035570397 1036.6310099358602 67.382 2 -0.48168476016979683 0.1330285943078309 0.9617912863415632 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF', 'ENST00000475707.5_1_3:15045421-15079667:+|nuORF', 'ENSG00000177463|ENST00000425241|NR2C2', 'nc|ENSG00000177463|P49116-2|NR2C2'] 106354 15730 SVSKFKPLS True PC9_epitope_Rep4 991.5702315764698 991.56912993586 68.431 2 -0.4816857887531226 0.1330285943078309 0.9617946431657792 ['ANAPC13|p.I72Lfs*48|1|0.19|ENSG00000129055|chr3:134478608-134478608|A/-|frameshift_variant'] 82691 5021 PVPAPRREQP True H1975_Epitope_Rep2 1145.63054041725 1145.62888490379 24.396 3 -0.4816896113070517 0.1330285943078309 0.9618071156946107 ['ENST00000369651.7_1_6:86159527-86159740:+|nuORF'] 67958 10031 LTLLSEQAP True PC9_epitope_Rep2 970.53351171458 970.53240993586 43.909 2 -0.48174379753028373 0.1330508615944084 0.9619834872002686 ['ENSG00000242173|ENST00000219409|ARHGDIG'] 43064 6746 IGHDACSYFTS True PC9_epitope_Rep2 1199.4917235555902 1199.4900749037902 31.356 3 -0.4817654484502911 0.1330508615944084 0.9620537322263439 ['PIK3C2G|p.D929G|1|0.47|ENSG00000139144|chr12:18491551-18491551|A/G|missense_variant'] 135945 10937 YEYARRRFTER True H1975_Epitope_Rep3 1545.7800581852496 1545.77896993586 47.156 2 -0.4817674181800205 0.1330508615944084 0.9620601164206166 ['ENST00000463900.5_1_2:74753929-74756164:-|nuORF', 'ENSG00000115307|ENST00000377526|AUP1'] 94236 25627 RWRHRRPR True PC9_epitope_Rep1 1218.70710845886 1218.70600993586 103.6 2 -0.4817767204861869 0.1330508615944084 0.9620902519982333 ['ENST00000293780.4_1_17:4804403-4804460:-|nuORF'] 108811 13712 TEQLMKHPFIR True H1975_Epitope_Rep3 1398.7441902704998 1398.74308993586 58.039 2 -0.48181374883487904 0.1330508615944084 0.9622099683318136 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 128273 11041 VSALRRPEF True PC9_epitope_Rep1 1073.5981776598098 1073.5970899358601 47.356 2 -0.4818757146995706 0.13306532328017615 0.9624094446466807 ['ENST00000569812.1_2_16:1657253-1659971:-|nuORF', 'ENST00000569646.5_3_16:1657253-1660426:-|nuORF', 'ENST00000426508.6_2_16:1657253-1660715:-|nuORF'] 110896 11773 TLALAPSP True H1975_Epitope_Rep2 768.43815477776 768.43760496793 50.359 1 -0.4820590924022572 0.1331465078650186 0.962993274836594 ['ENST00000373615.8_2_9:126774341-126774419:+|nuORF'] 15268 8324 EAGSPVSTSPE True NCI_RA007_Epitope_Rep5 1059.47203365683 1059.47147496793 38.694 1 -0.4820802614254399 0.13315874630948607 0.9630600349092998 ['ENSG00000240505|ENST00000261652|TNFRSF13B', 'nc|ENSG00000240505|O14836-2|TNFRSF13B', 'ENST00000579009.1_1_17:16842863-16843217:-|nuORF'] 58181 9223 LESLKNAGSL True PC9_epitope_Rep6 1030.56587447202 1030.56476993586 45.62 2 -0.48208040100194516 0.13315874630948607 0.9630604746430786 ['ENSG00000168038|ENST00000301831|ULK4', 'ENST00000489118.1_1_3:41288422-41292488:-|nuORF'] 86877 18930 QRRIRRHKNYL True NCI_RA007_Epitope_Rep1 1538.9018450837798 1538.9007499358602 77.776 2 -0.48208761909909 0.13317320523085135 0.9630832072063505 ['ENSG00000159461|ENST00000290649|AMFR', 'ENST00000492830.5_1_16:56419897-56437006:-|nuORF'] 65096 7870 LSDMEYRLK True H1975_Epitope_Rep3 1153.58014463717 1153.5790499358602 35.248 2 -0.4821288841070972 0.13318766366987472 0.963212866093705 ['nc|ENSG00000124429|Q8WVV4-1|POF1B', 'ENSG00000124429|ENST00000262753|POF1B'] 126965 16095 VPVSGPALTG True PC9_epitope_Rep1 896.4967322830399 896.49562993586 66.726 2 -0.48223049796183154 0.1332354805350769 0.9635299427211145 ['ENST00000403027.6_1_5:154238316-154238370:+|nuORF', 'ENST00000517568.5_2_5:154238316-154242796:+|nuORF'] 26274 18647 FIDDANYSV True PC9_epitope_Rep1 1042.4607406971402 1042.46017496793 76.515 1 -0.48224055964520784 0.13324549260303217 0.963561166768625 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 60455 12458 LILKPVTSP True H1975_Epitope_Rep2 966.61136811246 966.61026993586 53.009 2 -0.4822626111071052 0.13324549260303217 0.9636294884941196 ['ENSG00000154175|ENST00000471714|ABI3BP'] 66799 15396 LSVLRSFRLL True PC9_epitope_Rep2 1202.74992727394 1202.7482849037901 64.502 3 -0.48226539321549255 0.13324549260303217 0.9636380975255543 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN10A|p.R762S|1|0.32|ENSG00000185313|chr3:38728898-38728898|G/T|missense_variant', 'SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'SCN9A|p.L1226Rfs*18|1|0.19|ENSG00000169432|chr2:166238218-166238218|A/-|frameshift_variant', 'ENSG00000185313|ENST00000449082|SCN10A'] 78464 16058 PDARAAGETLL True PC9_epitope_Rep2 1112.5825871653199 1112.5814899358602 67.023 2 -0.48244351157882026 0.1332933053137196 0.9641841935174796 ['ENST00000461395.5_1_2:220378960-220396865:+|nuORF'] 88791 4417 RDQERKERLSK True NCI_RA007_Epitope_Rep2 1443.7906228689496 1443.7889849037902 21.814 3 -0.4825263565126422 0.13330553702468312 0.9644347191171022 ['ENST00000505323.1_1_5:108260361-108380497:+|nuORF', 'nc|ENSG00000151422|P16591-3|FER'] 127076 20632 VPYVIASGVVP True PC9_epitope_Rep3 1099.62774645259 1099.62664993586 84.632 2 -0.48260382981317335 0.13330553702468312 0.9646669609512887 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 19898 11989 ELWNKYRERQR True NCI_RA007_Epitope_Rep1 1576.8222573503997 1576.82116993586 50.621 2 -0.48279957851451294 0.13341783129315232 0.9652447639957207 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1'] 107437 4997 SYVKEFWWFP True NCI_RA007_Epitope_Rep2 1387.6601092100295 1387.6584749037902 24.061 3 -0.4828185524181609 0.13341783129315232 0.965300072209049 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1'] 116566 7307 TYFYKRKEYWK True NCI_RA007_Epitope_Rep2 1610.8245487661795 1610.8228949037903 33.043 3 -0.48288247770045784 0.13344896019211847 0.9654854875643012 ['MMP16|p.G504R|1|0.24|ENSG00000156103|chr8:88041775-88041775|C/T|missense_variant'] 17091 6520 EGRKIHVI True NCI_RA007_Epitope_Rep3 950.5661492555399 950.56504993586 32.688 2 -0.4829433567872389 0.13346341138016143 0.965660729967539 ['ENST00000417982.6_1_17:53851072-53853458:+|nuORF', 'nc|ENSG00000141179|Q9UKL6-2|PCTP', 'ENSG00000141179|ENST00000268896|PCTP'] 98467 13443 SIKLTCTLS True PC9_epitope_Rep3 964.52631815916 964.52522993586 56.755 2 -0.4830198074855577 0.13347563619384317 0.9658789243251903 ['nc|ENSG00000211672|A0A075B6K6|IGLV4-3'] 108286 7749 TEAWRGYNIT True PC9_epitope_Rep1 1209.5778361380499 1209.57619490379 34.628 3 -0.4830348182060812 0.13347563619384317 0.9659215186927645 ['ENST00000497283.1_1_3:50649969-50651260:+|nuORF'] 14389 8670 DTEVIEKPEN True H1975_Epitope_Rep1 1172.5560976339598 1172.5550099358602 38.278 2 -0.4830503232566279 0.13349008621408442 0.9659654300768699 ['PRLR|p.P377T|1|0.21|ENSG00000113494|chr5:35065829-35065829|G/T|missense_variant'] 97559 7057 SGVPEALDSDG True NCI_RA007_Epitope_Rep5 1045.45638359269 1045.45528993586 33.825 2 -0.48312753080602566 0.13351898480881788 0.96618278230871 ['ENSG00000198746|ENST00000361720|GPATCH3'] 95681 10588 SAWDLTTHPLT True PC9_epitope_Rep5 1240.60880191316 1240.60714490379 45.714 3 -0.48313658947717464 0.13351898480881788 0.9662081406522041 ['nc|ENSG00000164920|Q8N2R0-3|OSR2'] 94255 8008 RWRRQQERRQQ True PC9_epitope_Rep5 1625.87233586065 1625.8706849037903 35.741 3 -0.483347283997939 0.1335834583958646 0.9667893026250621 ['RASIP1|p.R336W|1|0.24|ENSG00000105538|chr19:48735369-48735369|G/A|missense_variant'] 96814 5098 SESESDDEGP True NCI_RA007_Epitope_Rep5 1050.3625427774998 1050.36144993586 26.307 2 -0.4834060299759313 0.13359567798305877 0.9669483385663464 ['ENSG00000136197|ENST00000350427|C7orf25', 'nc|nan|Q9BPX7-2|C7orf25'] 60261 7550 LIEDLMDP True NCI_RA007_Epitope_Rep1 944.45248451256 944.45138993586 33.362 2 -0.4834202511381585 0.13359567798305877 0.9669866376246573 ['ENSG00000003393|ENST00000264276|ALS2', 'ALS2|p.H1622Y|2|0.15|ENSG00000003393|chr2:201704193-201704193|G/A|missense_variant'] 13498 10363 DPENRAGHSVA True H1975_Epitope_Rep1 1151.53194857479 1151.53084993586 44.811 2 -0.48351040434429393 0.13361012455605023 0.9672275972258545 ['ENST00000592003.1_1_19:16437928-16437985:+|nuORF'] 100905 6379 SLSKVSIIK True NCI_RA007_Epitope_Rep4 973.61718176889 973.61608993586 31.14 2 -0.48356655459471826 0.13365791843132024 0.9673760601985784 ['nc|nan|Q8N9M1-3|C19orf47', 'nc|nan|Q8N9M1-2|C19orf47', 'ENSG00000160392|ENST00000683109|C19orf47', 'nc|nan|Q8N9M1|C19orf47', 'ENST00000584868.1_1_19:40827171-40828232:-|nuORF', 'ENST00000582734.1_1_19:40827791-40830098:-|nuORF'] 17924 15405 EIECFTPPSP True PC9_epitope_Rep2 1118.4954119536999 1118.4943099358602 64.536 2 -0.4836177130521919 0.13368903709879115 0.9675102339914696 ['nc|ENSG00000168959|P41594-3|GRM5'] 15303 15072 EAILDIITSR True NCI_RA007_Epitope_Rep2 1129.63428838501 1129.6331899358602 63.312 2 -0.48374090056657026 0.1337679443786785 0.9678289971288473 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6', 'ENST00000520378.1_1_5:150518646-150537284:-|nuORF'] 16648 5966 EESQRYYWRPK True PC9_epitope_Rep1 1540.7422756941999 1540.7406449037899 27.762 3 -0.4837469969092092 0.1337679443786785 0.9678446120004591 ['nc|ENSG00000150776|Q6ZUT1-3|NKAPD1', 'nc|ENSG00000150776|Q6ZUT1|NKAPD1', 'ENSG00000150776|ENST00000393047|NKAPD1', 'ENST00000530104.2_1_11:111946298-111951307:+|nuORF'] 46380 11301 ITIADC[Carbamidomethyl]GQLE True NCI_RA007_Epitope_Rep2 1118.5277749905702 1118.52727496793 48.546 1 -0.4839757179196647 0.1338824235553036 0.9684193187354184 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000486414.1_1_10:116449904-116450108:-|nuORF'] 69341 16774 LVPTSISSSL True PC9_epitope_Rep2 1002.55972646242 1002.55862993586 69.769 2 -0.48400441555619766 0.13389686390236583 0.9684898750458771 ['ENST00000557385.1_1_X:119387337-119387481:+|nuORF'] 13433 24476 DNRLRDLEG True PC9_epitope_Rep2 1086.5417849825 1086.5406899358602 99.736 2 -0.48409161818557617 0.13390907120588186 0.9687021101986235 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 80957 11711 PNEKTLTG True PC9_epitope_Rep2 858.44469671018 858.44358993586 50.378 2 -0.4840916274616774 0.13390907120588186 0.968702132600842 ['nc|ENSG00000186075|Q6X784-2|ZPBP2', 'ENSG00000186075|ENST00000348931|ZPBP2'] 99929 8437 SLIEMIQKFP True PC9_epitope_Rep6 1204.6525813014398 1204.6514899358601 42.144 2 -0.4841008550718445 0.13391904507868765 0.9687243992765765 ['LTO1|p.G87E|1|0.07|ENSG00000149716|chr11:69667980-69667980|C/T|missense_variant'] 100342 4697 SLMSPLEPGDP True H1975_Epitope_Rep2 1141.53252573841 1141.5314299358602 23.16 2 -0.4841151420654997 0.13391904507868765 0.9687588017447065 ['ENSG00000088280|ENST00000336689|ASAP3', 'nc|ENSG00000088280|Q8TDY4-3|ASAP3', 'nc|ENSG00000088280|Q8TDY4-2|ASAP3'] 92326 8079 RQMFFVISLDP True H1975_Epitope_Rep3 1351.6958430957498 1351.69420490379 36.05 3 -0.4841613163439022 0.13391904507868765 0.9688693807394076 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 123714 7900 VIQEKEKKGKE True H1975_Epitope_Rep1 1314.7507151195798 1314.74960993586 35.339 2 -0.4842210882221229 0.13392455283468635 0.9690111389146168 ['ENSG00000089048|ENST00000617257|ESF1'] 62464 13885 LLSLRPRPRP True PC9_epitope_Rep3 1203.7564096367098 1203.75475490379 58.489 3 -0.4842462558492857 0.13392455283468635 0.9690703572924756 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 44858 3058 IPYWRTDNNKN True NCI_RA007_Epitope_Rep2 1419.6895118453497 1419.68785490379 16.497 3 -0.48425060406325454 0.13392455283468635 0.9690805600841497 ['ENSG00000204022|ENST00000371939|LIPJ'] 20410 12310 EPMQQLLDP True PC9_epitope_Rep1 1069.5113963710098 1069.51028993586 52.206 2 -0.48428040705882275 0.13392455283468635 0.9691502651160313 ['SYNDIG1|p.D104Tfs*38|1|0.15|ENSG00000101463|chr20:24543402-24543402|G/-|frameshift_variant', 'ENSG00000101463|ENST00000376862|SYNDIG1'] 13294 19992 DLYEDELVP True PC9_epitope_Rep5 1091.50227115595 1091.5011699358602 81.954 2 -0.4843240589351898 0.13392455283468635 0.9692516469668545 ['ENSG00000125944|ENST00000302271|HNRNPR', 'nc|ENSG00000125944|O43390-4|HNRNPR', 'nc|ENSG00000125944|O43390-3|HNRNPR', 'nc|ENSG00000125944|O43390-2|HNRNPR'] 22581 5633 ETNVAEGRRVF True H1975_Epitope_Rep3 1276.6523980606396 1276.6513099358601 26.704 2 -0.4843582326899941 0.13395342634728544 0.9693304205883126 ['ENSG00000101825|ENST00000217939|MXRA5', 'MXRA5|p.T935Pfs*59|2|0.14|ENSG00000101825|chrX:3322883-3322883|G/-|frameshift_variant', 'MXRA5|p.G1254Dfs*31|1|0.44|ENSG00000101825|chrX:3321924-3321924|C/-|frameshift_variant'] 126271 11514 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 49.292 2 -0.4843718833401187 0.13395342634728544 0.969361739817238 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 69506 12841 LVSLLEHLS True PC9_epitope_Rep4 1009.58079626017 1009.57968993586 57.258 2 -0.4844370623280216 0.13396339633963397 0.9695101210388221 ['nc|ENSG00000086232|Q9BQI3-2|EIF2AK1', 'ENSG00000086232|ENST00000199389|EIF2AK1', 'ENST00000461493.1_1_7:6089476-6098783:-|nuORF'] 121210 14422 VGGPEIEVG True PC9_epitope_Rep2 855.4337976733099 855.43270993586 60.744 2 -0.48443905616572097 0.13396339633963397 0.9695146296518495 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 124408 14885 VLEEYMGSDP True H1975_Epitope_Rep3 1138.4852411928198 1138.4841499358602 62.641 2 -0.48446727494038033 0.13396339633963397 0.9695782456317853 ['CDH7|p.P272Qfs*6|1|0.27|ENSG00000081138|chr18:65824663-65824663|C/-|frameshift_variant', 'CDH7|p.A734Vfs*15|1|0.12|ENSG00000081138|chr18:65880737-65880737|C/-|frameshift_variant', 'ENSG00000081138|ENST00000397968|CDH7'] 67455 8341 LTEEAKNWAP True NCI_RA007_Epitope_Rep2 1157.57168812845 1157.5705899358602 37.084 2 -0.4845042595391314 0.13397336533493343 0.9696610714961812 ['ENSG00000007908|ENST00000333360|SELE'] 53024 13748 KRRRQEWERQY True NCI_RA007_Epitope_Rep1 1633.85495446101 1633.8538499358601 57.492 2 -0.48454743580154985 0.13397336533493343 0.9697569674996448 ['ENSG00000159450|ENST00000614923|TCHH'] 8282 17156 ATKLYEGV True PC9_epitope_Rep6 879.4701831820298 879.46908993586 78.576 2 -0.48457490128662395 0.13397336533493343 0.9698175208297264 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000527850.5_1_11:65029833-65063521:+|nuORF', 'nc|ENSG00000014138|Q14181-2|POLA2'] 57292 11403 LEGILRELKE True H1975_Epitope_Rep1 1198.6921376142998 1198.69104993586 48.841 2 -0.4845766275988361 0.13398333333333334 0.9698213151522032 ['ENSG00000205363|ENST00000569673|INSYN1'] 126125 9690 VPENFNEAKP True H1975_Epitope_Rep3 1143.5560380643099 1143.5549499358601 42.294 2 -0.4845873786063347 0.13398333333333334 0.969844913996284 ['nc|ENSG00000196277|Q14831-5|GRM7', 'nc|ENSG00000196277|Q14831-3|GRM7', 'nc|ENSG00000196277|Q14831-4|GRM7', 'ENSG00000196277|ENST00000357716|GRM7', 'nc|ENSG00000196277|Q14831-2|GRM7'] 9290 10655 AVRTWQPSRSR True NCI_RA007_Epitope_Rep1 1342.7218150331398 1342.7207099358602 45.436 2 -0.48461456187201274 0.13398333333333334 0.969904342138371 ['HSPBP1|p.A166Hfs*70|1|0.13|ENSG00000133265|chr19:55274542-55274542|C/-|frameshift_variant'] 111825 9012 TLRHPKCFLQR True NCI_RA007_Epitope_Rep5 1397.7714080778499 1397.77030993586 41.323 2 -0.48463939862825467 0.13399553348221727 0.9699583386119938 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'ENST00000381637.3_1_19:55501058-55501561:+|nuORF'] 47159 19783 IWPKKGTAVFW True PC9_epitope_Rep5 1331.7390282370698 1331.7373949037901 81.141 3 -0.4846512142692959 0.13399553348221727 0.9699839250241614 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 101679 16712 SPFTVGVAA True PC9_epitope_Rep4 847.4439684341899 847.44286993586 72.252 2 -0.4847322852399864 0.13405996366848325 0.9701577080402789 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 68550 12492 LTWIEYWP True PC9_epitope_Rep1 1106.54368247546 1106.5425899358602 52.918 2 -0.48477174758248825 0.13410549120906592 0.9702411718472265 ['ENSG00000106804|ENST00000223642|C5'] 84669 4764 QHEVNEQL True PC9_epitope_Rep6 995.4672230599099 995.46612993586 25.771 2 -0.48482510514688465 0.13410549120906592 0.9703528410470806 ['ENSG00000143375|ENST00000271636|CGN', 'ENST00000467998.1_1_1:151508635-151509819:+|nuORF'] 31078 21128 GAWPSRWRP True PC9_epitope_Rep1 1111.56754623787 1111.5664499358602 86.1 2 -0.4848735551577301 0.1341132163508807 0.9704530532340949 ['ENST00000216733.7_1_14:23834263-23834767:-|nuORF'] 98187 15561 SIDPESNIISI True NCI_RA007_Epitope_Rep1 1186.60813320682 1186.60702993586 64.614 2 -0.4848952639495374 0.1341132163508807 0.9704975865158603 ['nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 65234 9707 LSEEHPLSL True PC9_epitope_Rep5 1023.52367530687 1023.5225699358599 42.306 2 -0.4849241901840072 0.1341132163508807 0.9705565697595052 ['nc|ENSG00000172932|Q6ZTN6-1|ANKRD13D', 'ENSG00000172932|ENST00000511455|ANKRD13D', 'ENST00000513750.5_1_11:67067055-67069800:+|nuORF', 'ENST00000512231.5_1_11:67066841-67069800:+|nuORF', 'ENST00000507915.1_1_11:67067469-67068955:+|nuORF', 'nc|ENSG00000172932|Q6ZTN6-2|ANKRD13D'] 35789 9000 GTWGSSAA True NCI_RA007_Epitope_Rep4 735.3187679210699 735.3182149679301 41.451 1 -0.4849351502665247 0.1341132163508807 0.9705788118636876 ['TNKS1BP1|p.S1554Vfs*72|1|0.21|ENSG00000149115|chr11:57302483-57302483|G/-|frameshift_variant', 'ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000427750.2_1_11:57068016-57070427:-|nuORF'] 130134 6339 VTRLEQSL True NCI_RA007_Epitope_Rep3 944.5290950404799 944.52798993586 31.94 2 -0.48494645574581063 0.1341420739531086 0.9706016934348269 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB', 'ENST00000571632.5_1_17:7838298-7849136:+|nuORF'] 46752 14462 IVAQDGVGLL True PC9_epitope_Rep5 983.5651461960298 983.56404993586 60.628 2 -0.48497141075992956 0.1341420739531086 0.9706519793464167 ['ENST00000480424.6_1_16:630665-633032:+|nuORF'] 113454 19923 TQPVPKLDEVI True PC9_epitope_Rep3 1237.6918032611297 1237.69070993586 81.874 2 -0.4850107041576698 0.13415650203292676 0.9707305380598236 ['NMT2|p.R318Efs*3|1|0.19|ENSG00000152465|chr10:15128397-15128397|T/-|frameshift_variant', 'NMT2|p.N356Ifs*5|1|0.16|ENSG00000152465|chr10:15119425-15119446|TGAAACTGCTTCAGGTAAGTGT/-|frameshift_variant', 'ENSG00000152465|ENST00000378165|NMT2'] 107433 16212 SYVKDLVVQR True PC9_epitope_Rep1 1205.6768219033297 1205.6751749037899 67.176 3 -0.4850400583226627 0.13418759268825087 0.9707887284897966 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 58312 19998 LETPPVLFIPN True PC9_epitope_Rep3 1238.69107498514 1238.68996993586 82.168 2 -0.48507218645622496 0.13419978338748645 0.9708519286018947 ['nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'chr1:24319941-24331426|424|14.04|0.52|4.74|+|ENST00000524724|GRHL3,GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3', 'ENST00000461318.1_1_1:24668655-24669644:+|nuORF'] 39575 19912 HPILNDPIY True PC9_epitope_Rep2 1080.56039516876 1080.55928993586 81.987 2 -0.4850831316599359 0.13419978338748645 0.9708733420434486 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 55752 5682 LDEAHERTIH True NCI_RA007_Epitope_Rep2 1219.59454883135 1219.59344993586 26.715 2 -0.48516113501445335 0.13421197327423898 0.9710242159890421 ['ENSG00000067596|ENST00000262415|DHX8', 'ENST00000587044.1_1_17:41568567-41594747:+|nuORF', 'ENSG00000005100|ENST00000225296|DHX33', 'nc|ENSG00000005100|Q9H6R0-2|DHX33'] 92648 13886 RRFNKRHILHS True H1975_Epitope_Rep3 1462.83818219806 1462.8370899358601 58.722 2 -0.48517712403157365 0.13421197327423898 0.9710547646798101 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN', 'nc|ENSG00000130518|Q9H0B3-2|IQCN', 'IQCN|p.V592Gfs*7|1|0.36|ENSG00000130518|chr19:18265765-18265766|-/C|frameshift_variant'] 56531 12760 LDVDSFDECI True H1975_Epitope_Rep1 1154.48015581238 1154.47904993586 54.142 2 -0.48521540584608347 0.13422639874704256 0.9711273815496876 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 124721 6514 VLKKKKKKKK True NCI_RA007_Epitope_Rep3 1254.92274668582 1254.9211049037901 32.663 3 -0.4852426650352442 0.1342385871376208 0.9711786368888403 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 87016 5816 QSAQYLRQ True PC9_epitope_Rep4 992.5039429218 992.50284993586 29.231 2 -0.4852725604590122 0.1342385871376208 0.9712344143880774 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'SMG7|p.V670Pfs*161|1|0.17|ENSG00000116698|chr1:183544947-183544951|TATGT/-|frameshift_variant', 'ENST00000367538.1_1_1:183441704-183485127:+|nuORF'] 26901 21556 FLGALWLAL True PC9_epitope_Rep5 1002.59023874506 1002.58914993586 87.953 2 -0.48530243607648993 0.13426519834063608 0.971289698875032 ['nc|ENSG00000179583|P33076|CIITA', 'ENSG00000179583|ENST00000324288|CIITA', 'nc|ENSG00000179583|P33076-4|CIITA', 'ENST00000570546.5_1_16:10971115-11002148:+|nuORF', 'nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 82780 3814 PVRPRLGGYPC True NCI_RA007_Epitope_Rep4 1213.6389969259699 1213.63735490379 20.855 3 -0.48530558800197343 0.13426519834063608 0.9712955048196679 ['ENST00000556618.1_3_15:91500516-91500609:+|nuORF'] 98236 7131 SIENHCSV True PC9_epitope_Rep5 887.3807165546301 887.37960993586 32.399 2 -0.48531315627618166 0.13426519834063608 0.9713094250435536 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'ENST00000343889.8_1_1:2411150-2434522:+|nuORF'] 126200 19608 VPGLSLPAAAI True PC9_epitope_Rep5 1007.6015317047498 1007.60042993586 80.474 2 -0.48537888496691944 0.134277384423157 0.9714290931566175 ['ENST00000005340.9_1_17:7128967-7129144:-|nuORF'] 38312 21575 HFRRGRRRSLA True NCI_RA007_Epitope_Rep5 1410.8181154598199 1410.8170099358601 90.075 2 -0.48538096545231846 0.134277384423157 0.9714328452940553 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 32243 17182 GFHRLHDQMV True PC9_epitope_Rep4 1238.59786038998 1238.59621490379 74.096 3 -0.4853930319942339 0.13428956969363787 0.9714545643186328 ['ENSG00000110344|ENST00000252108|UBE4A', 'nc|ENSG00000110344|Q14139-2|UBE4A'] 46982 21056 IVPDLDLQQV True PC9_epitope_Rep5 1138.62338934814 1138.6222899358602 86.052 2 -0.4854251427162057 0.13428956969363787 0.9715120066622498 ['ENSG00000159256|ENST00000400485|MORC3'] 88172 15124 QWTSRKRK True NCI_RA007_Epitope_Rep3 1088.6203100867199 1088.61920993586 66.99 2 -0.4855721841770291 0.13437062704071434 0.9717685604225452 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 119291 9578 VELLESPP True H1975_Epitope_Rep3 882.46984882886 882.46874993586 41.853 2 -0.48557444156532054 0.13438504722717354 0.9717724173435864 ['nc|ENSG00000156299|Q13009-2|TIAM1', 'ENSG00000156299|ENST00000541036|TIAM1'] 30858 9603 GAQWSPQDP True H1975_Epitope_Rep2 984.4301092751998 984.42900993586 41.913 2 -0.4855986883455242 0.13444720227882262 0.971813691364629 ['ENSG00000154734|ENST00000284984|ADAMTS1'] 131828 19976 VYAPPVGGFSF True PC9_epitope_Rep6 1139.56514619603 1139.56457496793 89.502 1 -0.48560165144299766 0.13444720227882262 0.9718187160862694 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 115783 8817 TVLVDDMLP True PC9_epitope_Rep1 1001.5103337418499 1001.50922993586 38.757 2 -0.48563474190550604 0.13446162046908317 0.9718745471339058 ['ENSG00000103326|ENST00000219611|CAPN15', 'CAPN15|p.E990Dfs*41|1|0.17|ENSG00000103326|chr16:552926-552932|GAGAACC/-|frameshift_variant'] 34308 5439 GPPTFPEDVP True NCI_RA007_Epitope_Rep3 1054.4971262058598 1054.4960299358602 28.405 2 -0.485647826260425 0.13447603817900156 0.9718964808640009 ['nc|ENSG00000061337|Q9Y250-2|LZTS1', 'ENSG00000061337|ENST00000381569|LZTS1'] 74697 16371 NLIVLSQHL True PC9_epitope_Rep5 1035.60767971435 1035.60658993586 67.967 2 -0.4857324661410974 0.13450711263617285 0.9720364369913311 ['ENST00000595984.5_1_19:19010755-19014100:-|nuORF', 'ENST00000598969.5_1_19:19010490-19016602:-|nuORF', 'nc|ENSG00000105669|O14579-3|COPE', 'nc|ENSG00000105669|O14579-2|COPE', 'ENSG00000105669|ENST00000262812|COPE'] 104598 15777 SSTDQSEDKIW True PC9_epitope_Rep5 1294.56772494682 1294.5660749037902 65.679 3 -0.4859250732921601 0.13465029898229425 0.9723427973750763 ['ENSG00000178695|ENST00000377474|KCTD12'] 83592 15993 QDTLAYATALL True H1975_Epitope_Rep1 1178.6183039677 1178.61777496793 66.851 1 -0.48595236141809933 0.13465029898229425 0.9723848776958732 ['ENSG00000162402|ENST00000294383|USP24'] 130624 16951 VVAGRRKS True H1975_Epitope_Rep2 871.53518348043 871.53408993586 70.448 2 -0.48596821711638233 0.13465029898229425 0.9724091808021023 ['ENSG00000151952|ENST00000422113|TMEM132D', 'TMEM132D|p.Q218H|1|0.14|ENSG00000151952|chr12:129700124-129700124|C/G|missense_variant'] 41865 22657 IDTPPCPWI True PC9_epitope_Rep1 1040.50010341132 1040.4990099358602 91.955 2 -0.4860215733533172 0.13466246939489332 0.9724901744437324 ['ENSG00000152672|ENST00000272367|CLEC4F'] 23505 17190 EWFWWYWQKEK True PC9_epitope_Rep5 1714.7932486378998 1714.79161490379 71.141 3 -0.4860230937984471 0.13466246939489332 0.9724924647428919 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 64779 19236 LRSRRALGF True NCI_RA007_Epitope_Rep1 1074.6410455312998 1074.6399499358602 78.979 2 -0.486079839407023 0.1346746389966856 0.9725772488149708 ['ENST00000489343.5_1_3:132440828-132441221:+|nuORF'] 130216 8115 VTSFQDRL True PC9_epitope_Rep1 964.4977949121999 964.49668993586 36.041 2 -0.4860987434792638 0.1346746389966856 0.9726051957759538 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 129442 18660 VTELFQEFR True PC9_epitope_Rep4 1167.59242357303 1167.5913299358601 79.853 2 -0.48614696895279885 0.13470570600579596 0.9726758246054426 ['TAF1L|p.P251Q|1|0.36|ENSG00000122728|chr9:32634828-32634828|G/T|missense_variant'] 5814 18483 APFPEAAL True PC9_epitope_Rep4 814.4225047136199 814.4219549679301 79.166 1 -0.48617492475378643 0.13473452801279062 0.9727163337822905 ['nc|ENSG00000177030|O75398-5|DEAF1', 'nc|ENSG00000177030|O75398-4|DEAF1', 'nc|ENSG00000177030|O75398-3|DEAF1', 'ENSG00000177030|ENST00000382409|DEAF1'] 129573 17557 VTGKPDAETL True PC9_epitope_Rep6 1029.5342399905699 1029.5331499358601 80.172 2 -0.48623746005573226 0.13473452801279062 0.9728058145478398 ['ENSG00000196611|ENST00000315274|MMP1'] 92811 23352 RRLKHFPR True PC9_epitope_Rep6 1108.67301436592 1108.67247496793 102.93 1 -0.4862594270737713 0.13476334809979015 0.9728368786926124 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 59987 3189 LHPSSSVP True NCI_RA007_Epitope_Rep2 822.4235673427801 822.42246993586 17.049 2 -0.4862602874407445 0.13476334809979015 0.9728380915010655 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-5|ARHGEF28'] 79149 5626 PGASHRRV True H1975_Epitope_Rep3 878.48348226074 878.4823899358599 26.678 2 -0.4862906966317422 0.13477551292299494 0.9728807717529989 ['ENSG00000139517|ENST00000316334|LNX2'] 70316 21404 LYPGIVTFVI True PC9_epitope_Rep6 1120.65323292444 1120.65267496793 95.205 1 -0.4863105373112835 0.13477551292299494 0.9729084250476941 ['ENSG00000188037|ENST00000343257|CLCN1'] 139545 19037 YTLNILEEI True PC9_epitope_Rep5 1106.58594121026 1106.5848499358601 78.254 2 -0.48631902383758524 0.13478992156405603 0.9729202068795844 ['ENSG00000136167|ENST00000323076|LCP1', 'nc|ENSG00000136167|P13796-2|LCP1'] 643 5929 AATGTPSTVL True NCI_RA007_Epitope_Rep4 916.48656152216 916.48546993586 29.426 2 -0.4863478471317335 0.13480208489450635 0.9729600158926833 ['ENSG00000140948|ENST00000671377|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9-2|ZCCHC14'] 107662 7875 TAIQGISEKEK True NCI_RA007_Epitope_Rep4 1202.65066672514 1202.6495699358602 37.011 2 -0.4863988711090054 0.13480208489450635 0.9730297131059573 ['DLC1|p.V1401*|3|0.13|ENSG00000164741|chr8:13088579-13088579|T/-|frameshift_variant', 'ENSG00000164741|ENST00000276297|DLC1', 'nc|ENSG00000164741|Q96QB1-5|DLC1', 'nc|ENSG00000164741|Q96QB1-3|DLC1'] 124335 11421 VLDQLLLEAP True H1975_Epitope_Rep3 1109.63322575585 1109.6321299358601 49.047 2 -0.4864732552135169 0.13483314460800638 0.9731295776080338 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000509688.5_1_4:113236981-113303765:+|nuORF'] 13192 13846 DLTDYLMK True H1975_Epitope_Rep1 997.47903361357 997.47792993586 58.404 2 -0.4865542628889893 0.13487636333361086 0.9732360388942737 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'ENST00000436287.1_1_1:224051789-224052101:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENST00000574671.5_1_17:79477718-79478688:-|nuORF', 'ENST00000462494.5_1_7:5567381-5568494:-|nuORF', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2', 'ENSG00000169067|ENST00000423391|ACTBL2'] 127377 11898 VQPWLEHLP True PC9_epitope_Rep1 1117.59202965021 1117.59092993586 50.632 2 -0.4865878553954433 0.13487636333361086 0.9732794998807768 ['ENST00000515194.5_1_4:2938769-2938895:+|nuORF'] 118959 11357 VEEVTQIP True H1975_Epitope_Rep2 913.4756624852898 913.47456993586 48.733 2 -0.48658888142151535 0.13487636333361086 0.9732808210738257 ['ENSG00000137845|ENST00000260408|ADAM10', 'ENST00000396136.6_1_15:58889748-58968450:-|nuORF'] 46534 8840 ITQNRQDL True PC9_epitope_Rep1 986.5145076054998 986.51340993586 38.845 2 -0.48666577657386473 0.13489076861595845 0.97337879741097 ['nc|ENSG00000128276|O75679-2|RFPL3', 'ENSG00000128276|ENST00000249007|RFPL3', 'ENSG00000128250|ENST00000354373|RFPL1'] 133149 12326 WDANDMVI True PC9_epitope_Rep4 962.41676771018 962.41566993586 55.222 2 -0.48674414568653124 0.1349218242669464 0.9734765800617557 ['nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 48246 5295 KDEYFKNMTPK True NCI_RA007_Epitope_Rep1 1399.6805869544298 1399.6794899358601 24.68 2 -0.4867581863841608 0.13493173493173494 0.9734938826475873 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST'] 39728 8424 HPVMRRNPF True NCI_RA007_Epitope_Rep4 1152.59746646716 1152.5958149037901 39.217 3 -0.48678502499067255 0.13493173493173494 0.9735267762133654 ['ENSG00000171310|ENST00000303694|CHST11'] 85317 10987 QLALEEKAV True PC9_epitope_Rep4 999.5600608155898 999.55896993586 50.036 2 -0.48679366833415283 0.13493173493173494 0.9735373195295248 ['ENSG00000130300|ENST00000252590|PLVAP'] 41930 15491 IEAPGYSCFCS True PC9_epitope_Rep1 1175.46273192643 1175.4616299358602 64.408 2 -0.4868352997926589 0.13494613809293884 0.9735877644295293 ['ENST00000370828.3_1_X:132445305-132458320:-|nuORF'] 124735 4452 VLKKKKKKKK True NCI_RA007_Epitope_Rep5 1254.92274668582 1254.9211049037901 23.769 3 -0.4868905243270179 0.13496054077453298 0.9736538283866262 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 96100 6845 SEDPRNQRLSK True H1975_Epitope_Rep3 1328.6796754376398 1328.6785699358602 31.287 2 -0.48707079211976445 0.1350491950655102 0.9738629689484387 ['DISP3|p.S337Qfs*19|1|0.19|ENSG00000204624|chr1:11501994-11501995|-/C|frameshift_variant', 'nc|ENSG00000204624|Q9P2K9-2|DISP3', 'DISP3|p.H1269Pfs*115|1|0.32|ENSG00000204624|chr1:11535626-11535627|-/C|frameshift_variant', 'ENSG00000204624|ENST00000294484|DISP3'] 57153 6517 LEERKTDP True NCI_RA007_Epitope_Rep1 986.5032742154599 986.50216993586 29.364 2 -0.48709529046381056 0.1350491950655102 0.9738906494958547 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L', 'nc|ENSG00000126217|O15068-5|MCF2L'] 10114 11450 AYWTPEDTVP True PC9_epitope_Rep6 1177.5291546101298 1177.52804993586 55.104 2 -0.4871037899836572 0.1350491950655102 0.9739002128653691 ['ENST00000600775.5_1_19:58740851-58758098:+|nuORF'] 66291 7385 LSQGEVWAA True H1975_Epitope_Rep2 959.4712458111898 959.47014993586 33.346 2 -0.48712014041487145 0.1350491950655102 0.9739185520120814 ['ENSG00000130518|ENST00000392413|IQCN'] 86084 9675 QPPPGAPQ True PC9_epitope_Rep3 790.39735259494 790.3962499358599 42.163 2 -0.4871392974117789 0.1350491950655102 0.9739399429594793 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25', 'ENST00000594998.1_1_19:50338170-50339752:+|nuORF', 'nc|ENSG00000104973|Q71SY5-6|MED25'] 83141 7564 PYRQRWAWRTW True NCI_RA007_Epitope_Rep1 1604.8112987438797 1604.8096649037902 33.414 3 -0.4871682917160819 0.1350546011452923 0.9739721229810234 ['ENST00000491400.5_1_6:35254110-35255623:+|nuORF', 'ENST00000469195.5_3_6:35254110-35258154:+|nuORF', 'ENST00000229405.8_1_6:35254110-35258558:+|nuORF'] 96443 6051 SEILESLGSP True H1975_Epitope_Rep3 1030.51825557326 1030.51714993586 28.288 2 -0.48717085992351755 0.1350546011452923 0.9739749621103971 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'CFAP54|p.A1931Efs*73|1|0.17|ENSG00000188596|chr12:96684723-96684723|C/-|frameshift_variant'] 5359 8375 ALTFIEVP True H1975_Epitope_Rep2 888.4956696538799 888.49456993586 37.167 2 -0.48718450846605765 0.1350546011452923 0.973990019921817 ['ENST00000313486.11_1_17:1422233-1422356:-|nuORF'] 116427 19700 TWSPIVSV True PC9_epitope_Rep2 887.47526856247 887.47416993586 81.164 2 -0.4871845580599578 0.1350546011452923 0.973990074543038 ['ENST00000483075.1_1_7:14026292-14028664:-|nuORF'] 134674 5332 WWNRMSNRFRK True NCI_RA007_Epitope_Rep5 1579.7942687807497 1579.79263490379 27.202 3 -0.48720992491446846 0.1350546011452923 0.9740179246695125 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 98468 13331 SIKLTCTLS True PC9_epitope_Rep5 964.52631815916 964.52522993586 56.29 2 -0.48731244311311056 0.1351333355528182 0.9741287217737244 ['nc|ENSG00000211672|A0A075B6K6|IGLV4-3'] 85230 5780 QKKKKKKKK True NCI_RA007_Epitope_Rep4 1170.8288463009796 1170.82720490379 28.855 3 -0.48733108617877235 0.1351333355528182 0.9741485746846978 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 58443 10719 LEWIRRTV True H1975_Epitope_Rep2 1071.61891310439 1071.6178099358601 46.257 2 -0.48735410893277403 0.13516212797123645 0.9741729688768705 ['ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 87273 15492 QSSPHNQFTF True NCI_RA007_Epitope_Rep4 1191.5308859456302 1191.5297899358602 67.274 2 -0.48735950808593104 0.13516212797123645 0.9741786701879083 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.V1728Lfs*60|1|0.13|ENSG00000009694|chrX:124405213-124405219|AAGTGAC/-|frameshift_variant'] 98274 13736 SIFEVHSWIWR True NCI_RA007_Epitope_Rep1 1458.7408191422198 1458.7397299358602 57.445 2 -0.4873705717319043 0.13517427344452213 0.9741903300506679 ['ENST00000518942.1_1_8:52811934-52812075:+|nuORF'] 44379 15332 INDNPEPAI True PC9_epitope_Rep6 981.4767251144499 981.47562993586 71.103 2 -0.48737935358422235 0.13517427344452213 0.9741995632898406 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.N3720Kfs*28|2|0.54|ENSG00000157423|chr16:70868720-70868721|-/T|frameshift_variant', 'ENST00000309900.11_1_16:70928350-70955090:-|nuORF'] 1577 6084 AEFELFFRRCP True H1975_Epitope_Rep1 1413.6863410412097 1413.6852499358602 28.469 2 -0.4873977533044347 0.13518866825346626 0.9742188464166069 ['ENST00000462059.1_1_8:144660029-144660488:-|nuORF', 'nc|ENSG00000147813|Q6XQN6-3|NAPRT', 'ENSG00000147813|ENST00000449291|NAPRT', 'nc|ENSG00000147813|Q6XQN6-2|NAPRT'] 96079 12271 SEDFSPLSP True H1975_Epitope_Rep1 977.43419159613 977.43364496793 52.224 1 -0.4874471659270687 0.13520306258322237 0.9742702192443168 ['ENST00000512558.5_1_5:79729945-79747536:+|nuORF', 'ENSG00000039319|ENST00000505560|ZFYVE16', 'ENST00000511829.5_1_5:79738958-79744113:+|nuORF'] 26904 12230 FLGFFMVP True PC9_epitope_Rep3 956.4829967951999 956.48188993586 52.072 2 -0.4874663280984848 0.1352152058852901 0.9742899823692414 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 95588 6458 SASLLAPASV True PC9_epitope_Rep2 914.50729696674 914.50618993586 30.255 2 -0.4874827835160467 0.1352152058852901 0.9743068838999733 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant'] 38528 4152 HHDSHSSVIL True PC9_epitope_Rep4 1130.5468703629401 1130.54521490379 22.3 3 -0.4875465904403155 0.13524624269760166 0.9743718202598622 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 99553 14481 SLFAVVPK True PC9_epitope_Rep3 859.51673945163 859.51564993586 60.811 2 -0.4876554323368103 0.1352939218427535 0.9744804614112886 ['ENST00000404569.5_3_22:39905450-39907313:+|nuORF'] 106435 8393 SVTVHDAL True PC9_epitope_Rep2 840.4341320264799 840.43302993586 37.656 2 -0.4878087323483682 0.1353325899915126 0.974629208365902 ['FAM135B|p.A170D|1|0.36|ENSG00000147724|chr8:138250874-138250874|G/T|missense_variant'] 71925 15936 MPSAPVNTT True PC9_epitope_Rep5 916.4324177743201 916.43132993586 66.288 2 -0.48781027313892117 0.1353325899915126 0.9746306793836018 ['NBN|p.L708*|1|0.21|ENSG00000104320|chr8:89943316-89943316|A/-|frameshift_variant', 'ENSG00000104320|ENST00000265433|NBN'] 136227 8529 YGNVTSLGY True H1975_Epitope_Rep2 972.4552613938799 972.45416993586 37.762 2 -0.48781509643888005 0.1353325899915126 0.9746352812814109 ['nc|ENSG00000186448|O14709-2|ZNF197'] 124194 17503 VLAGELVGA True PC9_epitope_Rep5 827.4752685624699 827.47416993586 72.328 2 -0.48783618339115825 0.1353325899915126 0.974655347479558 ['ENSG00000198960|ENST00000361910|ARMCX6'] 12576 14922 DLDPMDMP True PC9_epitope_Rep2 932.361955256 932.36084993586 62.659 2 -0.48788171835246047 0.1353325899915126 0.9746983896512599 ['EPHB2|p.L317M|1|0.37|ENSG00000133216|chr1:22863174-22863174|C/A|missense_variant'] 70371 15809 LYQDHMQYI True PC9_epitope_Rep1 1209.54884450889 1209.54774993586 65.622 2 -0.4879871877522786 0.13537575717233574 0.9747966286109669 ['ENST00000497817.1_1_3:55513315-55514913:-|nuORF', 'nc|ENSG00000114251|P41221-2|WNT5A', 'ENSG00000114251|ENST00000264634|WNT5A'] 111377 9691 TLISETLLNSP True NCI_RA007_Epitope_Rep2 1186.64451871554 1186.64342993586 42.315 2 -0.48799845326746627 0.13537575717233574 0.9748070061014122 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A', 'MUC3A|p.S2662Ffs*13|3|0.16|ENSG00000169894|chr7:100959764-100959764|C/-|frameshift_variant', 'MUC3A|p.T2783Hfs*2|1|0.21|ENSG00000169894|chr7:100960120-100960121|-/C|frameshift_variant'] 52229 6830 KNDDKIHKQNE True NCI_RA007_Epitope_Rep5 1367.67934108447 1367.67769490379 32.956 3 -0.48800202616370747 0.13537575717233574 0.974810292828642 ['ENSG00000180116|ENST00000324616|C12orf40'] 36455 7650 GVIQNFKRTLS True H1975_Epitope_Rep1 1261.7142700412098 1261.7131699358602 34.404 2 -0.4880478535349657 0.13538338658146964 0.974852259220621 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 90275 24417 RHRRRLRRRPA True NCI_RA007_Epitope_Rep1 1528.95119531804 1528.9500899358602 101.18 2 -0.48808422357527026 0.13538338658146964 0.9748853190289704 ['ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1', 'ENST00000533005.5_1_11:67811756-67818283:+|nuORF'] 16759 13552 EEYWRAYYRA True H1975_Epitope_Rep1 1405.64149902377 1405.6404099358601 57.251 2 -0.4881550790537921 0.13538338658146964 0.9749491251260225 ['ENSG00000064703|ENST00000369702|DDX20'] 120005 21612 VFCDYLSGLDL True PC9_epitope_Rep5 1243.5794759308299 1243.57836993586 88.171 2 -0.4881596707032825 0.13538338658146964 0.9749532334028111 ['ENST00000261537.6_1_18:19445454-19445538:+|nuORF'] 85231 5891 QKKKKKKKK True NCI_RA007_Epitope_Rep4 1170.8288463009796 1170.82720490379 29.282 3 -0.4882345817504075 0.13541441336505983 0.9750198210712898 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 40795 12469 HVGSGDLFSGM-[Oxidation] True PC9_epitope_Rep5 1121.48115925233 1121.48006993586 52.96 2 -0.4882579001481547 0.13542654619877204 0.9750403853900939 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 62766 6627 LMDGLTAK True PC9_epitope_Rep5 847.44733956247 847.44624993586 30.464 2 -0.4882608610316196 0.13542654619877204 0.9750429911962881 ['nc|ENSG00000184428|Q969P6-2|TOP1MT', 'ENSG00000184428|ENST00000329245|TOP1MT'] 39292 18508 HLQDIKVKFS True PC9_epitope_Rep5 1213.68190728377 1213.68080993586 76.214 2 -0.4883172262466082 0.13545531688324652 0.9750923718707212 ['nc|ENSG00000205531|Q99733-2|NAP1L4', 'ENSG00000205531|ENST00000380542|NAP1L4'] 121743 22139 VGLSFGNIPV True PC9_epitope_Rep1 1001.55458151233 1001.55348993586 89.97 2 -0.4883520005641106 0.13545531688324652 0.9751226301585366 ['nc|ENSG00000133401|O15018-2|PDZD2', 'ENSG00000133401|ENST00000438447|PDZD2', 'PDZD2|p.K104Qfs*38|1|0.18|ENSG00000133401|chr5:31799549-31799550|-/G|frameshift_variant', 'ENST00000502824.1_1_5:31799421-31843499:+|nuORF'] 97733 17071 SHFVSDVVI True PC9_epitope_Rep5 1001.5181960036099 1001.51708993586 70.683 2 -0.488446842802594 0.1354863398888556 0.9752044017254907 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 43675 11269 IINFISWAP True H1975_Epitope_Rep3 1059.57531695691 1059.5742099358602 48.45 2 -0.4885010050523603 0.13551736186213667 0.975250636448113 ['ENSG00000011028|ENST00000303375|MRC2', 'MRC2|p.W1035Lfs*33|2|0.27|ENSG00000011028|chr17:62688539-62688540|-/T|frameshift_variant', 'ENST00000446119.2_1_17:60758997-60759418:+|nuORF'] 100287 9469 SLLSYEFRGP True NCI_RA007_Epitope_Rep5 1167.59242357303 1167.5913299358601 43.057 2 -0.4885734161000817 0.135537107587882 0.9753119663634048 ['ENST00000578660.1_1_17:46124592-46124850:-|nuORF'] 81266 4145 PPPPHPPPP True NCI_RA007_Epitope_Rep5 931.4915873329498 931.49048993586 22.446 2 -0.48857584071837573 0.135537107587882 0.9753140108866452 ['nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8'] 22175 9916 ETAWSPPTVP True H1975_Epitope_Rep2 1083.5236753068698 1083.52256993586 43.131 2 -0.488585927317724 0.135537107587882 0.9753225101939453 ['ENST00000420902.1_1_22:50008608-50009004:-|nuORF'] 19569 6562 ELRDERGHEMF True PC9_epitope_Rep5 1417.6408474007696 1417.6392149037902 30.211 3 -0.48858608590051383 0.135537107587882 0.9753226437434562 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 44131 12936 ILPCNVVQGLY True H1975_Epitope_Rep1 1217.6478302741698 1217.64672993586 54.834 2 -0.4885869576951219 0.135537107587882 0.9753233778771363 ['CAMTA1|p.G738C|1|0.23|ENSG00000171735|chr1:7664759-7664759|G/T|missense_variant'] 13594 7885 DPRGPGVYIL True NCI_RA007_Epitope_Rep3 1085.58694426977 1085.58584993586 38.131 2 -0.4886098428311172 0.135537107587882 0.9753426237461653 ['nc|ENSG00000145649|P12544-2|GZMA', 'ENSG00000145649|ENST00000274306|GZMA'] 88177 21771 QWTSRKRK True PC9_epitope_Rep2 1088.6203100867199 1088.61920993586 89.212 2 -0.48873491391975393 0.1356180336050574 0.975446993768059 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 52945 19569 KRKSDAVEM True PC9_epitope_Rep3 1062.54917886206 1062.5480899358602 80.507 2 -0.48877484731150855 0.13563241336860143 0.9754800550221421 ['ENSG00000186918|ENST00000344423|ZNF395'] 136037 9896 YFRIRFYFRNW True PC9_epitope_Rep6 1666.8521009266997 1666.85044490379 48.567 3 -0.4887960098689797 0.1356422796686296 0.9754975293426486 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 18037 15237 EIIMCNIRP True PC9_epitope_Rep1 1087.5518217143501 1087.55072993586 63.429 2 -0.4887963518141705 0.1356422796686296 0.9754978114391447 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant'] 79850 18139 PIHIYVII True PC9_epitope_Rep4 966.59023874506 966.58914993586 77.836 2 -0.4888107618457056 0.1356422796686296 0.9755096921849017 ['nc|ENSG00000112038|P35372-8|OPRM1', 'nc|ENSG00000112038|P35372-15|OPRM1', 'nc|ENSG00000112038|P35372-12|OPRM1', 'nc|ENSG00000112038|P35372-14|OPRM1', 'nc|ENSG00000112038|P35372-13|OPRM1', 'nc|ENSG00000112038|P35372-11|OPRM1', 'nc|ENSG00000112038|P35372-2|OPRM1', 'ENSG00000112038|ENST00000330432|OPRM1', 'nc|ENSG00000112038|P35372-6|OPRM1', 'nc|ENSG00000112038|P35372-4|OPRM1', 'nc|ENSG00000112038|P35372-7|OPRM1', 'nc|ENSG00000112038|P35372-5|OPRM1', 'nc|ENSG00000112038|P35372-9|OPRM1', 'nc|ENSG00000112038|P35372-10|OPRM1', 'nc|ENSG00000112038|P35372-3|OPRM1'] 127748 24993 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 108.78 2 -0.48885369662315353 0.13567329285536056 0.9755450108093734 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 82095 9621 PTAEGLAAA True PC9_epitope_Rep1 799.4075829254699 799.40648993586 41.862 2 -0.48887790096700606 0.13568767050369285 0.9755648715206087 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 90321 6935 RIDEFESM-[Oxidation] True NCI_RA007_Epitope_Rep2 1041.44371111445 1041.4426099358602 31.595 2 -0.488919822828064 0.1356930190781923 0.9755991913168076 ['ENSG00000136541|ENST00000410096|ERMN', 'nc|ENSG00000136541|Q8TAM6-2|ERMN'] 106631 18449 SWRRRWQHRYW True PC9_epitope_Rep6 1715.86579392823 1715.86468993586 83.607 2 -0.48894011924035874 0.1356930190781923 0.9756157735936133 ['ENST00000570069.5_1_16:1826945-1827407:+|nuORF', 'ENST00000561903.6_1_16:1826945-1828699:+|nuORF'] 102111 10848 SPQLDVNL True H1975_Epitope_Rep1 884.46034677432 884.45924993586 46.685 2 -0.48896652361762516 0.1356930190781923 0.9756373156357543 ['nc|ENSG00000169129|Q8N4X5-2|AFAP1L2', 'ENSG00000169129|ENST00000304129|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-4|AFAP1L2'] 134673 5239 WWNRMSNRFRK True NCI_RA007_Epitope_Rep5 1579.7942687807497 1579.79263490379 26.849 3 -0.4889762475505722 0.1356930190781923 0.975645240660398 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 57391 6504 LEHQRDRTI True NCI_RA007_Epitope_Rep1 1166.6156186290998 1166.61397490379 29.315 3 -0.4889875687519152 0.1356930190781923 0.9756544621040137 ['ENST00000464735.1_1_13:24164310-24168479:+|nuORF'] 76994 9215 NVSVVDLTC[Carbamidomethyl]R True H1975_Epitope_Rep1 1161.58120754576 1161.58010993586 40.355 2 -0.489090142415047 0.13573614529971392 0.975737779524776 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 1380 3971 AEEFKTEEQDD True NCI_RA007_Epitope_Rep2 1339.5415697686299 1339.53991490379 20.082 3 -0.48909104844179185 0.13573614529971392 0.9757385138329698 ['ENSG00000166024|ENST00000298999|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2|R3HCC1L'] 124034 19153 VKNIKRYRKEL True NCI_RA007_Epitope_Rep4 1445.8830667018099 1445.88196993586 82.819 2 -0.4891539107478454 0.13573614529971392 0.9757894065211492 ['nc|ENSG00000100271|O95922-4|TTLL1', 'ENSG00000100271|ENST00000266254|TTLL1', 'ENST00000439248.5_1_22:43464548-43465849:-|nuORF', 'TTLL1|p.E89Rfs*36|1|0.42|ENSG00000100271|chr22:43069693-43069693|C/-|frameshift_variant'] 80686 12609 PLPVPPPTG True PC9_epitope_Rep1 873.49600400705 873.49490993586 53.368 2 -0.48920711954143375 0.13576715176715176 0.975832413998207 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 2067 8687 AELGIYPAVDP True H1975_Epitope_Rep3 1143.58119018299 1143.58008993586 38.413 2 -0.48923333289682713 0.13579897893003842 0.9758535844800239 ['ENSG00000110955|ENST00000262030|ATP5F1B'] 64356 6895 LQNVQVPPP True H1975_Epitope_Rep2 990.5498304850599 990.54872993586 31.442 2 -0.48923343077114606 0.13579897893003842 0.9758536635086068 ['ENST00000531236.1_1_11:71192815-71195619:+|nuORF'] 46980 21155 IVPDLDLQQV True PC9_epitope_Rep1 1138.62338934814 1138.6222899358602 86.205 2 -0.4892707726159196 0.13579897893003842 0.9758838079184383 ['ENSG00000159256|ENST00000400485|MORC3'] 14187 16704 DSSSFLGQTY True H1975_Epitope_Rep2 1103.4771190372699 1103.4760299358602 69.489 2 -0.48927263429366546 0.13579897893003842 0.9758853104511404 ['ENST00000584425.1_1_18:71740698-71749311:-|nuORF', 'ENST00000578399.5_1_18:71740698-71797950:-|nuORF', 'nc|ENSG00000141665|Q8NCQ5-2|FBXO15', 'ENSG00000141665|ENST00000419743|FBXO15'] 56999 7868 LEEEEEEDP True PC9_epitope_Rep3 1117.4298940613298 1117.42878993586 35.25 2 -0.48928226329345703 0.13579897893003842 0.9758930815105634 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 80304 14303 PLENHTAI True PC9_epitope_Rep3 893.46068112749 893.45958993586 60.103 2 -0.4893370773851483 0.13579897893003842 0.9759373124666497 ['GALNT17|p.L576Pfs*19|1|0.28|ENSG00000185274|chr7:71712069-71712070|-/G|frameshift_variant', 'ENSG00000185274|ENST00000333538|GALNT17'] 90230 18648 RHLNDRKFVF True PC9_epitope_Rep2 1330.7258377844198 1330.72420490379 77.095 3 -0.48934071184136935 0.13579897893003842 0.9759402451189327 ['ENSG00000174243|ENST00000308025|DDX23'] 77687 8557 PAAAPHLHP True PC9_epitope_Rep1 909.4820852784101 909.48098993586 37.752 2 -0.48935281655103174 0.13579897893003842 0.9759500126507624 ['ENSG00000156150|ENST00000647563|ALX3'] 18177 8341 EIQEGKEDP True H1975_Epitope_Rep3 1043.4771190372699 1043.4760299358602 37.069 2 -0.48940845671286404 0.13581868670912386 0.9759949197302811 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3'] 60941 5056 LLAAHDEQKK True NCI_RA007_Epitope_Rep5 1151.62987171091 1151.62822490379 26.147 3 -0.48945097922159697 0.13581868670912386 0.9760292604377921 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6', 'SOX5|p.V282Yfs*37|1|0.38|ENSG00000134532|chr12:23665532-23665532|G/-|frameshift_variant', 'nc|ENSG00000134532|P35711-4|SOX5', 'nc|ENSG00000134532|P35711-2|SOX5', 'nc|ENSG00000134532|P35711-5|SOX5', 'ENSG00000134532|ENST00000451604|SOX5'] 78960 5650 PFHDSEVR True NCI_RA007_Epitope_Rep4 985.46174375665 985.46064993586 28.337 2 -0.48946386088868526 0.13581868670912386 0.9760396687974318 ['ENST00000506507.5_1_3:129168750-129233481:+|nuORF'] 133728 18091 WLKRRIWRMP True NCI_RA007_Epitope_Rep3 1440.82886338432 1440.82720490379 79.277 3 -0.48949699943440705 0.13581868670912386 0.9760664588262379 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 70018 17322 LYGKIAEAF True PC9_epitope_Rep5 1010.5436824754598 1010.54258993586 71.628 2 -0.48949878759226123 0.13581868670912386 0.9760679050614867 ['ENSG00000123159|ENST00000393033|GIPC1', 'GIPC1|p.R91C|1|0.13|ENSG00000123159|chr19:14482706-14482706|G/A|missense_variant', 'ENST00000587811.1_1_19:14593203-14593794:-|nuORF'] 134900 16709 YADPSILYI True NCI_RA007_Epitope_Rep4 1053.5382627418498 1053.53767496793 72.456 1 -0.4895248140235895 0.13581868670912386 0.9760889632574006 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000490851.5_1_7:18832955-19035682:+|nuORF'] 135499 7006 YEDLRGQI True PC9_epitope_Rep4 992.4927095317598 992.49160993586 34.196 2 -0.4895533169958886 0.13583305620219488 0.9761120451749793 ['ENSG00000105428|ENST00000222033|ZNRF4', 'ZNRF4|p.H198N|1|0.38|ENSG00000105428|chr19:5456083-5456083|C/A|missense_variant'] 125519 16738 VLVSVGLLGL True PC9_epitope_Rep2 968.6270181765998 968.62592993586 69.63 2 -0.48965768111897223 0.13588375147555157 0.9761967851439278 ['ENST00000225964.9_1_17:48274384-48275320:-|nuORF'] 122338 8448 VGSAGVTVVI True NCI_RA007_Epitope_Rep4 900.5280324113199 900.52692993586 39.311 2 -0.48968604892404355 0.13588375147555157 0.9762198929632752 ['nc|ENSG00000135069|Q9Y617-2|PSAT1', 'ENSG00000135069|ENST00000376588|PSAT1', 'ENST00000518968.1_1_8:50652851-50653445:-|nuORF'] 79134 2700 PGALQTNP True NCI_RA007_Epitope_Rep2 796.40791727864 796.40682993586 14.728 2 -0.48971995235241644 0.13588375147555157 0.9762475591256217 ['TRAF3|p.R360Afs*2|1|0.16|ENSG00000131323|chr14:102903371-102903371|C/-|frameshift_variant', 'nc|ENSG00000131323|Q13114-2|TRAF3', 'TRAF3|p.Y548*|1|0.51|ENSG00000131323|chr14:102905720-102905726|ATATTAA/-|frameshift_variant', 'ENSG00000131323|ENST00000392745|TRAF3'] 53026 12836 KRRSYYSYSYY True H1975_Epitope_Rep3 1534.72047762046 1534.7193899358601 54.593 2 -0.4897543493806183 0.13588375147555157 0.9762756876402222 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF'] 48328 8140 KDSCYVKKQLR True H1975_Epitope_Rep3 1366.7391048900597 1366.73746490379 36.287 3 -0.48979032742791867 0.13588375147555157 0.9763051789113035 ['ENST00000338230.3_2_19:53270898-53289983:-|nuORF'] 35597 12990 GTLAENLLEA True H1975_Epitope_Rep3 1029.5342399905699 1029.5331499358601 55.2 2 -0.4898244412100306 0.13588375147555157 0.9763332133839084 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 1236 10817 AEDKWLLVE True H1975_Epitope_Rep1 1101.57062549929 1101.5695299358601 46.571 2 -0.4898297092293339 0.13588375147555157 0.9763375491321218 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8'] 107616 7202 TAGSFSLSVR True NCI_RA007_Epitope_Rep5 1023.53490869691 1023.53380993586 34.38 2 -0.48985031162617276 0.13589811797566004 0.9763545230158654 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 27021 16523 FLLPRHHL True PC9_epitope_Rep6 1031.6028691174301 1031.6017699358601 75.992 2 -0.4898656305331254 0.13591248399807146 0.9763671624486367 ['ENST00000328914.4_1_7:4802311-4802611:+|nuORF'] 122289 5606 VGRSVHLQTE True PC9_epitope_Rep5 1124.59382055536 1124.59272993586 26.567 2 -0.48988860044727095 0.13591781095189015 0.9763861453193015 ['ENST00000493762.1_1_3:169650279-169650495:+|nuORF'] 112381 15859 TNDGGFPGSI True PC9_epitope_Rep2 963.42977492203 963.42866993586 66.26 2 -0.48990977115786577 0.13591781095189015 0.9764036750901053 ['ENST00000604238.2_1_10:74322776-74385791:-|nuORF'] 127270 22832 VQLDLTGIFM True PC9_epitope_Rep4 1135.59473207215 1135.59362993586 96.047 2 -0.4899252730746108 0.13591781095189015 0.976416532279746 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 65882 6663 LSLCWKSP True NCI_RA007_Epitope_Rep2 932.47897404392 932.47786993586 30.529 2 -0.4899359407931002 0.13591781095189015 0.9764253907570788 ['ENST00000343280.8_1_19:57984308-57984569:-|nuORF'] 40508 4770 HSFSSATEI True NCI_RA007_Epitope_Rep3 977.44542498617 977.44432993586 25.726 2 -0.4899506395625395 0.13591781095189015 0.9764376112930188 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS'] 71233 17008 MFVFKERWFWR True PC9_epitope_Rep6 1630.8231092975398 1630.82200993586 77.972 2 -0.49002099527414394 0.13594653899860362 0.9764963527268334 ['ENSG00000157227|ENST00000311852|MMP14'] 71229 18789 MFVFKERWFWR True PC9_epitope_Rep2 1630.8231092975398 1630.82200993586 77.641 2 -0.490041574914281 0.13594653899860362 0.9765136168366403 ['ENSG00000157227|ENST00000311852|MMP14'] 65420 9556 LSEVAYLMEP True PC9_epitope_Rep3 1150.55801221026 1150.5569099358602 41.708 2 -0.49005515575422054 0.1359586422420958 0.9765250310111813 ['ENSG00000112983|ENST00000254900|BRD8'] 90189 11363 RHHWWEGALDL True NCI_RA007_Epitope_Rep1 1418.6843668952597 1418.6827349037899 48.173 3 -0.49006807903689764 0.1359586422420958 0.976535908612028 ['nc|ENSG00000184385|Q8N2C9|UMODL1-AS1'] 96970 13679 SEVFHVNISL True PC9_epitope_Rep6 1143.59242357303 1143.5913299358601 64.401 2 -0.4900883732621294 0.1359730048704267 0.9765530226992134 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 45464 5846 ISEIESNRSFS True H1975_Epitope_Rep2 1267.60444480871 1267.60334993586 27.474 2 -0.4901369706210107 0.13598058607449762 0.9765941711867357 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 57905 12805 LEQKFHSI True PC9_epitope_Rep1 1000.5341804209199 1000.53308993586 54.128 2 -0.49014484595919544 0.13598058607449762 0.9766008622551952 ['ENST00000450453.6_2_1:163292807-163295872:+|nuORF'] 75428 18242 NQFSLQLN True PC9_epitope_Rep4 962.4821448480599 962.48159496793 78.237 1 -0.49023777150520415 0.13598058607449762 0.9766803251045623 ['nc|ENSG00000211933|A0A0B4J1U7|IGHV6-1'] 18208 13777 EIRFRYIIL True PC9_epitope_Rep1 1221.7233781729299 1221.7217249037901 57.84 3 -0.4902464011152701 0.13598058607449762 0.976687754378526 ['ENST00000547393.5_1_12:96397563-96406985:-|nuORF'] 39638 8849 HPPRMKMRT True NCI_RA007_Epitope_Rep2 1152.6008375954398 1152.59920490379 39.069 3 -0.49026337491639777 0.13599494714447177 0.9767023930554789 ['ENST00000477132.1_1_2:37544174-37551396:-|nuORF'] 76149 13742 NRRRRRDWFWR True H1975_Epitope_Rep1 1702.9141411029796 1702.91304993586 57.998 2 -0.49046741702603086 0.13609015058338597 0.976881269728166 ['ENST00000361972.8_1_10:7212945-7217999:-|nuORF'] 6148 5970 APPAGELIQP True H1975_Epitope_Rep2 991.5338460677499 991.53274993586 27.943 2 -0.49048729995164936 0.13609015058338597 0.9768990103090335 ['ENSG00000166454|ENST00000299575|ATMIN'] 81642 17574 PRRWWRWCWQP True NCI_RA007_Epitope_Rep2 1655.8044395416298 1655.80334993586 73.1 2 -0.4905358935751328 0.1360954612687175 0.9769426192145203 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 39611 11236 HPLLGVSA True PC9_epitope_Rep5 792.4493881678001 792.4488349679301 48.209 1 -0.49058250556805943 0.1360954612687175 0.9769847957063317 ['ENST00000564128.1_1_16:67865591-67866126:-|nuORF', 'ENSG00000107984|ENST00000373970|DKK1'] 127082 6371 VQADQVHQVP True NCI_RA007_Epitope_Rep2 1119.56727145435 1119.5661699358602 29.389 2 -0.49059608808301064 0.1360954612687175 0.9769971513889338 ['ENST00000461615.1_1_8:27289739-27289862:+|nuORF'] 123617 21530 VILDLPLVI True NCI_RA007_Epitope_Rep5 993.6474192680099 993.64632993586 89.899 2 -0.4906044796557627 0.1360954612687175 0.9770048000774325 ['ENSG00000265972|ENST00000582401|TXNIP', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP'] 3480 11924 AGLNSSWVEL True PC9_epitope_Rep5 1074.53457434374 1074.53346993586 50.862 2 -0.49063653995699075 0.1360954612687175 0.9770341297296694 ['ENSG00000104765|ENST00000380629|BNIP3L'] 128307 15179 VSDALLVPD True PC9_epitope_Rep2 927.49131254943 927.49020993586 63.643 2 -0.49070374449651355 0.13610077107152352 0.9770961785327594 ['nc|ENSG00000142192|P05067-10|APP', 'nc|ENSG00000142192|P05067-3|APP', 'nc|ENSG00000142192|P05067-4|APP', 'nc|ENSG00000142192|P05067-5|APP', 'nc|ENSG00000142192|P05067-6|APP', 'nc|ENSG00000142192|P05067-7|APP', 'nc|ENSG00000142192|P05067-11|APP', 'nc|ENSG00000142192|P05067-8|APP', 'nc|ENSG00000142192|P05067-9|APP', 'ENSG00000142192|ENST00000346798|APP', 'nc|ENSG00000142192|P05067-2|APP', 'ENST00000474136.5_1_21:27382178-27543016:-|nuORF'] 126267 11067 VPHLLTEA True PC9_epitope_Rep3 878.48616759934 878.48506993586 47.569 2 -0.49070495031774186 0.13610077107152352 0.9770972989979767 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 12865 4549 DLLGTCDQAP True NCI_RA007_Epitope_Rep4 1031.4593607981499 1031.45826993586 23.901 2 -0.4907213196337464 0.13610077107152352 0.9771125346004184 ['ENSG00000180644|ENST00000441259|PRF1'] 44466 15612 INNYQELAL True PC9_epitope_Rep4 1076.5502244078798 1076.54912993586 67.975 2 -0.49072689829871924 0.13610077107152352 0.9771177375424115 ['ENST00000591831.5_1_17:73841979-73842808:-|nuORF', 'ENST00000254806.7_2_17:73842232-73842808:-|nuORF'] 45764 3193 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 16.897 2 -0.49074960606792567 0.13610077107152352 0.9771389718016622 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 56996 9415 LEEEEEEDP True PC9_epitope_Rep2 1117.4298940613298 1117.42878993586 41.554 2 -0.49081514445960445 0.13611512704189307 0.9772007604438674 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 15756 8216 EDEEWKRLRS True PC9_epitope_Rep2 1346.6578773638998 1346.6567899358602 36.96 2 -0.49091296476577656 0.1361393130722321 0.9772943744463983 ['ENSG00000160868|ENST00000651514|CYP3A4'] 64712 12250 LRMFFDCLY True H1975_Epitope_Rep2 1206.55657274162 1206.5554699358602 52.201 2 -0.4909451037833593 0.1361393130722321 0.9773254950534345 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 139193 7744 YSTGLNSAY True H1975_Epitope_Rep3 974.4345259493 974.43397496793 34.769 1 -0.4909700754748959 0.1361393130722321 0.9773497996331594 3682 4428 AGRRWGQARP True NCI_RA007_Epitope_Rep5 1153.6217070690495 1153.62007490379 23.668 3 -0.4909857272398312 0.1361393130722321 0.9773650886390641 ['ENST00000573951.1_1_16:3313772-3314576:+|nuORF'] 22099 5112 ESVKNQDP True H1975_Epitope_Rep2 915.42977492203 915.42866993586 24.743 2 -0.4909904101860608 0.13617028347346383 0.9773696713431521 ['nc|ENSG00000171533|Q96JE9-3|MAP6', 'ENSG00000171533|ENST00000304771|MAP6'] 49140 13375 KGIATLAVVL True PC9_epitope_Rep5 983.6379172134699 983.63682993586 56.463 2 -0.49105497889912875 0.13617784866912572 0.977433247434578 ['ENSG00000181773|ENST00000374024|GPR3'] 76873 19187 NVIHSIFSL True PC9_epitope_Rep5 1028.5654805492 1028.5643899358602 78.842 2 -0.49106904987301847 0.13617784866912572 0.9774471985038372 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6', 'ENSG00000128159|ENST00000248846|TUBGCP6', 'ENST00000498611.5_1_22:50656167-50657252:-|nuORF', 'ENST00000439308.6_1_22:50656167-50658651:-|nuORF', 'ENST00000491449.5_1_22:50656167-50658502:-|nuORF'] 100657 13021 SLQTGVGEL True PC9_epitope_Rep4 902.4709114580199 902.4703649679301 57.98 1 -0.49108850763348905 0.13617784866912572 0.9774665473098711 ['nc|ENSG00000075651|Q13393-4|PLD1', 'ENSG00000075651|ENST00000351298|PLD1', 'nc|ENSG00000075651|Q13393-2|PLD1'] 99545 13963 SLEYSFAL True PC9_epitope_Rep2 928.4541987647199 928.45310993586 58.984 2 -0.49110918499857054 0.13617784866912572 0.9774871812206514 ['ENST00000543940.1_1_12:124114818-124118191:-|nuORF'] 81117 2768 PPHPPPPPP True H1975_Epitope_Rep3 931.49158733295 931.49048993586 14.733 2 -0.49128613681718286 0.13621864097026085 0.9776668104678242 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 115527 8646 TVGSNFSP True PC9_epitope_Rep1 807.37628279719 807.37518993586 38.095 2 -0.4913088652494313 0.13621864097026085 0.977690278715077 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'RGS22|p.K902Nfs*4|1|0.26|ENSG00000132554|chr8:100002282-100002286|TAGAT/-|frameshift_variant', 'RGS22|p.P235Qfs*30|1|0.33|ENSG00000132554|chr8:100066187-100066187|G/-|frameshift_variant', 'nc|ENSG00000132554|Q8NE09-2|RGS22', 'ENST00000520923.5_1_8:101051146-101092499:-|nuORF'] 13319 8301 DLYSPKRLF True H1975_Epitope_Rep2 1137.61824439805 1137.6166049037902 36.882 3 -0.49131888862529444 0.13621864097026085 0.9777006570048893 ['ENST00000525968.1_1_11:73984627-74015361:-|nuORF', 'ENSG00000149380|ENST00000331597|P4HA3', 'nc|ENSG00000149380|Q7Z4N8-3|P4HA3', 'nc|ENSG00000149380|Q7Z4N8-2|P4HA3', 'P4HA3|p.T307Rfs*88|1|0.17|ENSG00000149380|chr11:74286238-74286241|AGGG/-|frameshift_variant'] 58701 21405 LFKLIVNSL True PC9_epitope_Rep2 1045.6535672776101 1045.6524699358602 87.805 2 -0.49134871050682133 0.13621864097026085 0.977731638557946 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion'] 71629 17211 MLNVCFNKLF True PC9_epitope_Rep3 1227.6144219709101 1227.61276490379 71.358 3 -0.4913716695116115 0.13622393886535428 0.9777555961487253 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 96490 4690 SELAETPK True NCI_RA007_Epitope_Rep4 873.44436235701 873.44326993586 24.464 2 -0.4914495843567926 0.13622393886535428 0.9778375861702048 ['TUT1|p.Q564Tfs*71|1|0.25|ENSG00000149016|chr11:62576026-62576029|TCTG/-|frameshift_variant', 'ENSG00000149016|ENST00000476907|TUT1'] 71031 4826 MESRPPPPP True H1975_Epitope_Rep1 1006.4906013567798 1006.48950993586 23.638 2 -0.4914618472528295 0.13622393886535428 0.9778505870411709 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 16872 19807 EFVKQLCL True PC9_epitope_Rep1 978.5208388558999 978.51974993586 81.003 2 -0.49146272932090745 0.13622393886535428 0.9778515232046029 ['ENSG00000127080|ENST00000287996|IPPK'] 3219 10455 AGEVHTGTTI True PC9_epitope_Rep1 984.4876241513199 984.48652993586 45.102 2 -0.49148053164343625 0.13622393886535428 0.9778704463663573 ['ENSG00000240065|ENST00000374859|PSMB9', 'nc|ENSG00000240065|P28065-2|PSMB9', 'ENST00000464863.1_1_6:32821928-32823983:+|nuORF'] 103272 11918 SQTGFVVL True H1975_Epitope_Rep2 849.45961849833 849.4590749679301 50.922 1 -0.49154233165711647 0.13623828825835604 0.9779365672006377 ['ENSG00000133048|ENST00000255409|CHI3L1'] 56025 8493 LDKGNTVAP True H1975_Epitope_Rep2 913.4868958753299 913.48578993586 37.621 2 -0.4916425039911253 0.13628586142166554 0.9780451615597494 ['chr3:121919363-121922220|361|11.05|0.03|8.62|+|0|TE_info:LTR27D,LTR27D_dup58,ERV1,LTR,donor,-,121918874,121919363|None,SLC15A2|1'] 8899 18985 AVGGALAGLV True PC9_epitope_Rep2 826.4912529797799 826.49070496793 78.391 1 -0.49173443567421077 0.13635004485198843 0.9781463671199263 ['ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENST00000472564.1_1_13:113976589-113976733:+|nuORF'] 74268 16938 NIFIRRAI True PC9_epitope_Rep1 1001.6134338011299 1001.61232993586 69.975 2 -0.49177538381580416 0.13636439143507367 0.9781919221875678 ['ENSG00000204361|ENST00000389586|NXPE2'] 98798 15935 SISWSEPAV True PC9_epitope_Rep4 974.4709114580198 974.46980993586 69.22 2 -0.4919756176512257 0.13639308317137588 0.9784189128761238 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 15959 12366 EDVDAAFLSRD True PC9_epitope_Rep2 1236.56224564356 1236.5611499358602 52.875 2 -0.4920181816032863 0.13639308317137588 0.978468070185354 ['ENST00000460579.5_1_2:219527197-219528106:+|nuORF', 'ENSG00000074582|ENST00000359273|BCS1L'] 64300 16508 LQLWQERERRQ True NCI_RA007_Epitope_Rep2 1540.8222573504 1540.82116993586 68.941 2 -0.49215834105059125 0.13641950700950103 0.9786321872067638 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000467201.5_1_7:100174858-100176198:-|nuORF', 'ENST00000498539.1_1_7:100174858-100175272:-|nuORF'] 124441 11509 VLERDLVL True PC9_epitope_Rep3 955.5702315764698 955.56912993586 49.271 2 -0.4921732465124801 0.13641950700950103 0.9786498432816312 ['ENST00000511314.5_1_4:145569905-145576060:+|nuORF', 'ENST00000509630.1_1_4:145573840-145606800:+|nuORF', 'nc|ENSG00000164161|Q96QV1-2|HHIP', 'ENSG00000164161|ENST00000296575|HHIP'] 127111 12639 VQAVVPRGL True PC9_epitope_Rep6 937.5709002828098 937.56980993586 60.08 2 -0.4921765773828273 0.13641950700950103 0.9786537941535366 ['ENST00000478371.1_1_9:123629171-123630543:-|nuORF', 'ENST00000419155.5_1_9:123629171-123631115:-|nuORF'] 133688 8732 WKYPDRTLLKI True NCI_RA007_Epitope_Rep5 1431.8238204901897 1431.82216490379 40.254 3 -0.49220480919208914 0.13643158489187124 0.97868735920038 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 133182 21375 WDSEEEWLW True PC9_epitope_Rep3 1278.51931820242 1278.51822993586 87.517 2 -0.49220643069803827 0.13643158489187124 0.9786892912729754 ['ENST00000396037.8_1_12:22408231-22408294:-|nuORF'] 49557 22521 KKIMIYLL True PC9_epitope_Rep3 1020.6405600657599 1020.63946993586 91.902 2 -0.4922948193583496 0.13649575630740612 0.9787953076617683 ['ENST00000605810.1_1_3:70174691-70175321:-|nuORF'] 70702 9288 MDPFNHRIF True NCI_RA007_Epitope_Rep4 1175.5545985956699 1175.5535099358601 42.583 2 -0.4923190430449139 0.13651009832580388 0.9788246020023276 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 67913 19227 LTLDRAQLL True PC9_epitope_Rep2 1041.61824439805 1041.6171499358602 79.329 2 -0.49241111943824345 0.1365719980069756 0.9789368934948661 ['ENST00000325167.9_1_17:78973043-78973379:+|nuORF'] 93778 6747 RTTFVVGG True NCI_RA007_Epitope_Rep3 835.4552018242298 835.4546549679301 33.631 1 -0.49241952565775626 0.1365719980069756 0.9789472195290887 ['ENST00000397722.5_1_16:450423-450627:+|nuORF'] 14567 12529 DVETLQQTI True PC9_epitope_Rep3 1045.52915461013 1045.52804993586 53.217 2 -0.4924502367139545 0.13658406962067363 0.9789850500238471 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 34408 5988 GPVVMCKKAAK True NCI_RA007_Epitope_Rep5 1130.6304063882199 1130.6293099358602 29.717 2 -0.49245497144587386 0.13658406962067363 0.9789908971208613 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 81805 17367 PSFKTFPYL True PC9_epitope_Rep5 1098.57498260374 1098.57388993586 71.802 2 -0.4926265816316749 0.13671466294653978 0.9792054876408482 ['CASP8AP2|p.A1952P|1|0.47|ENSG00000118412|chr6:89871350-89871350|G/C|missense_variant'] 46288 18286 ITEGQLDWA True PC9_epitope_Rep2 1031.4923751785898 1031.4912699358601 75.659 2 -0.4926682094655304 0.1367289999003554 0.9792583227278964 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT', 'ENST00000482694.1_1_2:85577073-85578124:-|nuORF'] 130702 14734 VVDGNFEEV True PC9_epitope_Rep4 1006.46074069714 1006.46017496793 64.607 1 -0.49272268322671287 0.13675994353566387 0.9793279233259907 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 121804 12179 VGNALLNVVL True NCI_RA007_Epitope_Rep5 1010.61243074162 1010.61132993586 53.5 2 -0.4927455478225202 0.1367742792613259 0.9793572930089713 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 84716 15657 QHFEFEYQT True PC9_epitope_Rep5 1227.5196525555898 1227.5185499358602 65.236 2 -0.49279641213742426 0.13680522111696033 0.9794229590026455 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS', 'ENST00000495255.1_1_7:97493514-97498468:-|nuORF'] 113084 5000 TPYKQEINA True PC9_epitope_Rep6 1062.53457434374 1062.53346993586 26.84 2 -0.49291425037027115 0.13683616194493342 0.979576841516628 ['ENSG00000138356|ENST00000374700|AOX1'] 7768 4725 ASVLDALDPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 23.268 2 -0.4930217601096323 0.13686482896047825 0.9797193740222749 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 111022 14917 TLDLPALTRR True NCI_RA007_Epitope_Rep2 1154.6771562565 1154.6760499358602 62.701 2 -0.49306502411233966 0.13686482896047825 0.9797773078240432 ['ENSG00000261150|ENST00000615648|EPPK1'] 57612 8729 LELPIQNEPP True NCI_RA007_Epitope_Rep5 1148.607739284 1148.60664993586 40.242 2 -0.4931375468397465 0.13689576725726907 0.9798751631278458 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2'] 32393 7952 GGGFADPRDAG True NCI_RA007_Epitope_Rep5 1018.4468219684999 1018.44572993586 37.276 2 -0.4931669226094976 0.13692670452658498 0.9799150645479967 ['ENST00000556029.5_2_12:98909542-98909698:+|nuORF'] 116143 7481 TVTDKDQP True H1975_Epitope_Rep3 902.4345259493 902.43342993586 33.757 2 -0.4932426631319475 0.13698857598299682 0.9800186476140667 ['ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 121281 10202 VGGYSRAP True PC9_epitope_Rep1 805.4082516318099 805.40714993586 44.121 2 -0.4932617177692249 0.13698857598299682 0.9800448665674517 ['ENST00000489739.1_1_9:139685858-139686514:+|nuORF'] 81801 13249 PSFGVTSIPN True H1975_Epitope_Rep3 1017.5131106231701 1017.51257496793 56.218 1 -0.4933368794719154 0.13700063095672965 0.9801489147241333 ['nc|ENSG00000010810|P06241-2|FYN', 'nc|ENSG00000010810|P06241-3|FYN', 'ENSG00000010810|ENST00000354650|FYN', 'ENST00000521361.5_1_6:112040873-112041254:-|nuORF'] 55126 9347 LALVINAFY True H1975_Epitope_Rep1 1022.58006798418 1022.5789699358601 40.861 2 -0.4933389361147304 0.13700063095672965 0.9801517758388951 ['ENST00000359358.8_1_18:30253844-30254171:-|nuORF'] 138186 14568 YQQQQSLAL True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 61.306 2 -0.4933794138564782 0.13703156391651586 0.9802082391789163 ['ENSG00000106546|ENST00000242057|AHR'] 13030 17452 DLQSKVDTL True PC9_epitope_Rep4 1017.53423999057 1017.53314993586 75.126 2 -0.4934543256762406 0.1370533935449595 0.9803135008471079 ['CON__Q6IFZ6'] 25954 16888 FGSNKDLMGL True PC9_epitope_Rep5 1080.52738078832 1080.5262899358602 69.972 2 -0.4934605377212999 0.1370533935449595 0.980322274284389 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2'] 67611 7245 LTEVKDELEP True NCI_RA007_Epitope_Rep1 1171.5972341699498 1171.59612993586 32.173 2 -0.49346493742185826 0.1370533935449595 0.9803284922355218 ['ENSG00000132467|ENST00000254803|UTP3'] 85591 14296 QLLTECLVLS True PC9_epitope_Rep5 1117.6052967558498 1117.6041899358602 59.993 2 -0.49352343122794207 0.1370533935449595 0.9804114855870897 ['ENST00000236412.11_1_1:28157683-28169749:+|nuORF'] 29205 18229 FVCAQCFRP True PC9_epitope_Rep6 1069.4837421545299 1069.48264993586 82.76 2 -0.49353104082098553 0.1370533935449595 0.9804223269634228 ['ENST00000466410.5_1_2:128398362-128421974:-|nuORF', 'nc|ENSG00000072163|Q7Z4I7-3|LIMS2', 'ENSG00000072163|ENST00000355119|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-5|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-2|LIMS2', 'ENST00000476932.5_1_2:128412197-128421974:-|nuORF'] 27236 7642 FLVKGAQG True NCI_RA007_Epitope_Rep3 818.4650382319398 818.46394993586 37.186 2 -0.4935438084564717 0.13706772035263062 0.9804405400581405 ['ALKBH2|p.S56Afs*34|1|0.22|ENSG00000189046|chr12:109092622-109092622|A/-|frameshift_variant', 'ENST00000536720.1_1_12:109530171-109530633:-|nuORF', 'nc|ENSG00000189046|Q6NS38-2|ALKBH2', 'ENSG00000189046|ENST00000429722|ALKBH2'] 93481 6756 RSHCYHMFYQR True NCI_RA007_Epitope_Rep1 1526.6659570331399 1526.66431490379 30.288 3 -0.49359258511236265 0.1370986486037786 0.9805103863493448 ['ENST00000216361.8_1_14:31344155-31346862:+|nuORF'] 93263 17891 RRRRVPGRE True NCI_RA007_Epitope_Rep2 1180.7013543720798 1180.70024993586 74.329 2 -0.4937856718519676 0.13721030612922505 0.980791022286066 ['ENST00000354336.7_1_22:21271864-21272434:+|nuORF'] 56447 9826 LDSPDSGLPP True H1975_Epitope_Rep1 996.47639076128 996.47528993586 42.724 2 -0.4937874705694896 0.13721030612922505 0.9807936676949837 ['nc|ENSG00000183688|Q8N5W9|RFLNB', 'ENSG00000178882|ENST00000546355|RFLNA'] 94294 17230 RWSRRTLYVQ True PC9_epitope_Rep2 1363.74730150499 1363.7462099358602 71.536 2 -0.49384381913675945 0.13725783156531698 0.9808768316826609 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 19453 11840 ELPSSQNVSPA True H1975_Epitope_Rep1 1127.54586730343 1127.5447699358601 50.54 2 -0.49402526384859485 0.13728875460672665 0.98114845818819 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 140137 15289 YVRRETEEVF True PC9_epitope_Rep4 1326.65681473474 1326.6557099358602 66.738 2 -0.49405101041411126 0.13730307608028022 0.9811874758052395 ['nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'chr1:24319941-24331426|424|14.04|0.52|4.74|+|ENST00000524724|GRHL3,GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3'] 115698 16251 TVLEQLGV True PC9_epitope_Rep3 857.4858332461698 857.48472993586 67.648 2 -0.49410361354504095 0.13731511761092943 0.98126756001631 ['nc|ENSG00000177685|Q8N4Y2-3|CRACR2B', 'ENSG00000177685|ENST00000525077|CRACR2B', 'ENST00000528694.1_1_11:829331-829541:+|nuORF', 'ENST00000530737.2_1_11:828674-829541:+|nuORF', 'nc|ENSG00000177685|Q8N4Y2-2|CRACR2B', 'ENST00000530688.5_1_11:829331-830866:+|nuORF', 'ENST00000527763.5_1_11:829331-831706:+|nuORF'] 60375 25252 LIIIKDLLLLI True H1975_Epitope_Rep1 1278.8890465156999 1278.8874149037902 104.59 3 -0.49412214816767996 0.13731511761092943 0.9812958949338749 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 86055 11946 QPLQSTFNP True PC9_epitope_Rep6 1030.5083595959 1030.5072699358602 57.201 2 -0.4942058859359767 0.13732715834204803 0.9814246723037251 ['ZNF292|p.Q1438L|1|0.26|ENSG00000188994|chr6:87257942-87257942|A/T|missense_variant'] 114862 3340 TTDLQATK True NCI_RA007_Epitope_Rep2 876.45526139388 876.45416993586 17.654 2 -0.4942394775827855 0.13732715834204803 0.9814766828663524 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 97124 11607 SFELFADKVPK True NCI_RA007_Epitope_Rep2 1279.68123857743 1279.67959490379 49.74 3 -0.49430249104073476 0.13734147798950933 0.9815747903763734 ['ENSG00000196262|ENST00000468812|PPIA'] 65806 6130 LSKAVHKAVL True NCI_RA007_Epitope_Rep4 1064.6706143240801 1064.66950993586 30.192 2 -0.49432983616945114 0.13737011585831424 0.9816175851324037 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1'] 43369 7980 IHNITHGSGP True H1975_Epitope_Rep3 1031.51484195867 1031.51374993586 35.665 2 -0.49433888900830864 0.13737011585831424 0.9816317820911936 ['ENSG00000183196|ENST00000332272|CHST6'] 67941 23709 LTLIRRLFFFF True PC9_epitope_Rep4 1471.8703767597897 1471.86926993586 99.554 2 -0.49448357452994957 0.13742510497751076 0.981860667547055 63425 15311 LPGPPEPPSP True H1975_Epitope_Rep2 986.5072969667399 986.50618993586 64.052 2 -0.4944905422084334 0.13742510497751076 0.9818717844058166 ['ENST00000515007.6_1_5:77806081-77806153:-|nuORF'] 140132 14633 YVRKEEVL True PC9_epitope_Rep4 1034.5760452328998 1034.57494993586 64.216 2 -0.4945206825132453 0.13742510497751076 0.9819199728432392 ['MYO5A|p.D1260Y|2|0.26|ENSG00000197535|chr15:52351325-52351325|C/A|missense_variant'] 119367 14349 VENLPRTVIR True H1975_Epitope_Rep1 1195.7037053575098 1195.7026099358602 60.386 2 -0.49455673410249795 0.13742510497751076 0.9819778254409441 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENSG00000168894|ENST00000306368|RNF181'] 103820 10604 SRGTGSFFSAF True PC9_epitope_Rep1 1162.54072235334 1162.5396299358601 45.681 2 -0.49455790858972914 0.13742510497751076 0.981979714067006 ['nc|ENSG00000105993|O75190-4|DNAJB6', 'ENST00000487480.1_1_7:157174896-157178337:+|nuORF', 'DNAJB6-AGT|1|fusion', 'nc|ENSG00000105993|O75190-2|DNAJB6', 'nc|ENSG00000105993|O75190-3|DNAJB6', 'ENSG00000105993|ENST00000262177|DNAJB6'] 56279 10637 LDQLQLEG True H1975_Epitope_Rep1 914.4709114580199 914.46980993586 45.872 2 -0.49461827206782155 0.13743942109805485 0.9820771131248515 ['nc|ENSG00000135241|Q9NP80-3|PNPLA8', 'nc|ENSG00000135241|Q9NP80-2|PNPLA8', 'ENSG00000135241|ENST00000257694|PNPLA8'] 116364 12912 TVYEYSVWD True NCI_RA007_Epitope_Rep5 1160.50260550912 1160.5015099358602 56.348 2 -0.4946494307463574 0.1375035267953463 0.9821276439137373 ['ENSG00000169154|ENST00000307599|GOT1L1'] 3003 16819 AFPFQVEVL True PC9_epitope_Rep4 1048.5593325395998 1048.55822993586 72.666 2 -0.4946681244479988 0.13753443754771466 0.9821580432791143 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'ENST00000609587.1_1_18:2728435-2728615:+|nuORF'] 30876 17104 GARLQELTLA True PC9_epitope_Rep2 1070.6084079903399 1070.60730993586 71.039 2 -0.49470455707990946 0.13754418573775662 0.9822174690120653 ['ENST00000548477.5_1_12:113758555-113770610:-|nuORF'] 56508 6676 LDTRGELQAA True NCI_RA007_Epitope_Rep3 1072.5512870370399 1072.55018993586 33.341 2 -0.49473039616652326 0.13754418573775662 0.9822597594246971 ['ENSG00000129028|ENST00000249861|THAP10'] 99376 20461 SLDYEALQAF True PC9_epitope_Rep2 1155.5448046742697 1155.54370993586 84.133 2 -0.4947518136905796 0.13754418573775662 0.9822949037039594 ['ENSG00000112852|ENST00000194155|PCDHB2', 'ENSG00000272674|ENST00000609684|PCDHB16', 'ENSG00000113212|ENST00000231137|PCDHB7', 'ENSG00000113209|ENST00000231134|PCDHB5', 'ENSG00000081818|ENST00000194152|PCDHB4', 'ENSG00000113205|ENST00000231130|PCDHB3', 'ENSG00000120324|ENST00000239446|PCDHB10', 'ENSG00000177839|ENST00000316105|PCDHB9', 'PCDHB9|p.H773Tfs*11|1|0.14|ENSG00000177839|chr5:141189630-141189630|C/-|frameshift_variant', 'ENSG00000113248|ENST00000231173|PCDHB15', 'ENSG00000120322|ENST00000239444|PCDHB8', 'ENSG00000197479|ENST00000354757|PCDHB11', 'nc|ENSG00000197479|Q9Y5F2-2|PCDHB11'] 111003 6650 TLDGELDEKYK True NCI_RA007_Epitope_Rep1 1309.64016161109 1309.6385249037899 29.879 3 -0.4947859298848904 0.1375562156690287 0.982351054957168 ['ENSG00000091136|ENST00000222399|LAMB1', 'ENST00000472714.1_1_7:107564398-107569844:-|nuORF'] 85934 10198 QNVVVTEAVKE True PC9_epitope_Rep6 1214.65066672514 1214.6495699358602 49.869 2 -0.49480648940246275 0.1375562156690287 0.9823849941409836 ['nc|ENSG00000154645|Q9H9P2-3|CHODL', 'chr21:17917400-18256509|409|12.4|0.24|5.68|+|ENST00000400131|CHODL,CHODL'] 47786 5882 IYQRHVYNL True NCI_RA007_Epitope_Rep3 1204.6352914445197 1204.6341899358601 30.114 2 -0.49490583328457627 0.13760371722535678 0.982550055542719 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 61707 15391 LLIETNNVG True PC9_epitope_Rep3 971.52876068731 971.52766993586 64.356 2 -0.4949554477540063 0.13761802824380612 0.9826331529362703 ['ENST00000475639.5_1_21:44521392-44521665:-|nuORF'] 123670 7693 VINLSSHIE True PC9_epitope_Rep1 1010.5396597241801 1010.53856993586 34.413 2 -0.4950045797740347 0.1376300549259081 0.9827158772316816 ['ANKRD26|p.R1462S|1|0.48|ENSG00000107890|chr10:27017622-27017622|T/A|missense_variant'] 118325 8482 VDENIERRNQY True H1975_Epitope_Rep3 1434.6851547408999 1434.68404993586 37.611 2 -0.4950125307743354 0.1376300549259081 0.9827293051466227 ['NKD1|p.H258Q|1|0.24|ENSG00000140807|chr16:50632359-50632359|C/G|missense_variant'] 138270 18294 YQVLVEGV True PC9_epitope_Rep5 905.4858332461699 905.48472993586 75.382 2 -0.4950507980242593 0.1376563900043142 0.9827940908009392 ['nc|ENSG00000261371|P16284-5|PECAM1', 'nc|ENSG00000261371|P16284-3|PECAM1', 'nc|ENSG00000261371|P16284-4|PECAM1', 'nc|ENSG00000261371|P16284-2|PECAM1', 'nc|ENSG00000261371|P16284-6|PECAM1', 'ENSG00000261371|ENST00000563924|PECAM1'] 98887 16313 SIWDGSEVL True NCI_RA007_Epitope_Rep3 1004.48147614172 1004.48097496793 71.866 1 -0.49508411802488383 0.1376563900043142 0.9828507148685364 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1'] 30241 13773 GAAELEPEL True PC9_epitope_Rep2 927.4549270407099 927.45382993586 58.263 2 -0.49510326087448253 0.1376563900043142 0.9828833363860945 ['ENST00000528902.1_1_17:72960370-72968856:-|nuORF'] 47009 9977 IVQLETESKRL True PC9_epitope_Rep6 1314.7507151195798 1314.74960993586 48.928 2 -0.4951276422776193 0.13768729155259096 0.9829249802254033 ['nc|ENSG00000112029|Q9UKT4-2|FBXO5', 'ENSG00000112029|ENST00000229758|FBXO5'] 58603 7587 LFFGGKGA True NCI_RA007_Epitope_Rep3 795.4279244472299 795.42682993586 36.976 2 -0.49524485377652305 0.13778456228844493 0.9831266697484123 ['ENST00000461731.5_1_2:220094544-220099084:+|nuORF', 'ENST00000465550.5_1_2:220096537-220099084:+|nuORF', 'ENSG00000163516|ENST00000323348|ANKZF1'] 76686 13581 NTLGALPI True H1975_Epitope_Rep3 797.46470387877 797.4641549679301 57.522 1 -0.49525588358071554 0.13779658204745313 0.983145776154307 ['nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'ENSG00000162073|ENST00000318782|PAQR4', 'PAQR4|p.L165Cfs*71|1|0.29|ENSG00000162073|chr16:2971610-2971611|-/GGCG|frameshift_variant'] 98888 16951 SIWDGSEVL True NCI_RA007_Epitope_Rep5 1004.48147614172 1004.48097496793 71.961 1 -0.49526154721240223 0.13779658204745313 0.9831555954914344 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1'] 88173 15610 QWTSRKRK True NCI_RA007_Epitope_Rep3 1088.6203100867199 1088.61920993586 68.994 2 -0.4953250298632234 0.13782290577870687 0.9832660533024569 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 124307 14284 VLDLIFYQRMK True NCI_RA007_Epitope_Rep2 1424.78499245332 1424.78388993586 60.224 2 -0.49533284386396637 0.13782290577870687 0.9832796995081999 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 102623 15044 SQCESEDLGI True PC9_epitope_Rep4 1079.44410465683 1079.4430099358601 65.799 2 -0.4953464387915423 0.13782290577870687 0.9833034675776416 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 111096 11811 TLEELNTVL True PC9_epitope_Rep4 1030.55464108198 1030.55354993586 53.197 2 -0.49537996530074574 0.1378349232683534 0.9833622242154008 ['nc|ENSG00000167419|P22079-2|LPO', 'ENSG00000167419|ENST00000262290|LPO'] 88702 8066 RCPCCASV True PC9_epitope_Rep3 837.3295500122499 837.32844993586 36.002 2 -0.49538582764142164 0.1378349232683534 0.9833725189903847 ['ENST00000609516.1_1_1:38148756-38148999:-|nuORF'] 27917 20945 FQLYQRLKFER True PC9_epitope_Rep1 1526.8357821562197 1526.83468993586 85.386 2 -0.4955378328492468 0.13789899794279648 0.9836416131459708 ['ENSG00000137393|ENST00000259939|RNF144B'] 4220 8116 AIEDSRDKPTY True NCI_RA007_Epitope_Rep2 1293.62009487285 1293.61898993586 36.201 2 -0.49558066980903 0.1379253139567677 0.9837181989143094 ['HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4'] 116312 14841 TVWERELRKEW True NCI_RA007_Epitope_Rep2 1530.7943112670596 1530.7932099358602 62.402 2 -0.4955906118468865 0.1379253139567677 0.9837360210044697 ['ENST00000590898.5_1_18:33620811-33647397:-|nuORF'] 961 5844 AEAAAVAGL True NCI_RA007_Epitope_Rep3 771.41266830591 771.41211496793 29.966 1 -0.49559264269021 0.1379253139567677 0.9837396636842497 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2', 'ENST00000372343.7_1_1:44412628-44412673:+|nuORF'] 58090 19741 LERRRVRCR True PC9_epitope_Rep3 1242.7203755644998 1242.7192699358602 81.161 2 -0.49564997561744417 0.13793503865167048 0.9838428073256597 ['ENST00000298532.2_1_9:139276772-139277807:-|nuORF'] 91090 26916 RLLRHIILLRI True PC9_epitope_Rep5 1414.9612574528599 1414.9601699358602 109.99 2 -0.4956593624215168 0.13793503865167048 0.9838597509330702 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 33373 7772 GLERDPQL True PC9_epitope_Rep5 926.4821448480598 926.48104993586 34.838 2 -0.4957030991744971 0.13793503865167048 0.9839389073130173 ['nc|ENSG00000174527|Q8N1T3-3|MYO1H', 'nc|ENSG00000174527|Q8N1T3|MYO1H', 'ENSG00000174527|ENST00000310903|MYO1H'] 138602 16999 YRQRCWRLWMR True H1975_Epitope_Rep3 1652.8292743904797 1652.8281699358602 70.981 2 -0.49571464348798905 0.1379493389512798 0.9839598582043624 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|452|3|anti-sense'] 66631 3989 LSSQNFTLTK True NCI_RA007_Epitope_Rep3 1137.60298825673 1137.60133490379 22.095 3 -0.49574320704360536 0.13795448513800423 0.9840117993858513 ['nc|ENSG00000135083|Q8IV13|CCNJL', 'ENSG00000135083|ENST00000257536|CCNJL', 'ENST00000377503.6_1_5:159681329-159707642:-|nuORF'] 107445 16814 SYVQSVSI True PC9_epitope_Rep5 881.4494477374499 881.4488949679301 69.682 1 -0.4957433739269299 0.13795448513800423 0.9840121032862397 ['nc|ENSG00000293504|Q99463|NPY6R'] 27499 18692 FPEHRRQMYIQ True H1975_Epitope_Rep3 1503.74050187239 1503.73940993586 78.384 2 -0.4957796712985991 0.13795448513800423 0.9840783215343256 ['ENST00000526620.5_1_11:118081332-118083197:-|nuORF'] 98727 19406 SIRRVYTRL True NCI_RA007_Epitope_Rep1 1162.69347502698 1162.69183490379 79.638 3 -0.4957899381991691 0.13795448513800423 0.9840970948658859 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 38190 4560 HESILKWMC True H1975_Epitope_Rep2 1145.53617165021 1145.53453490379 22.647 3 -0.4957904576598139 0.13795448513800423 0.9840980452209074 ['ENSG00000080298|ENST00000617270|RFX3', 'nc|ENSG00000080298|P48380-2|RFX3'] 138612 23595 YRRAHRRFVTK True NCI_RA007_Epitope_Rep3 1488.8538322621996 1488.85272993586 102.35 2 -0.495826469698029 0.1379687836918841 0.9841640481563787 ['ENSG00000116898|ENST00000373116|MRPS15', 'ENST00000477040.1_1_1:36921391-36921985:-|nuORF', 'ENST00000488606.5_1_1:36921391-36923601:-|nuORF'] 66735 8189 LSTRCREMPQN True NCI_RA007_Epitope_Rep5 1333.62308916165 1333.62198993586 38.181 2 -0.49592037351681506 0.1379996682700282 0.9843372572328193 ['nc|ENSG00000186487|Q9UL68-4|MYT1L', 'ENSG00000186487|ENST00000647738|MYT1L', 'MYT1L|p.D985Tfs*4|1|0.71|ENSG00000186487|chr2:1839274-1839274|C/-|frameshift_variant'] 87880 5658 QVLLREGV True PC9_epitope_Rep6 912.5392658013599 912.53816993586 29.867 2 -0.4960025592474947 0.1380614343528163 0.9844901599055628 ['ENST00000265132.7_1_9:116823209-116823275:-|nuORF'] 51835 3719 KKKRKKKRLVI True PC9_epitope_Rep3 1424.0191066821499 1424.0180099358602 19.41 2 -0.4960051817999395 0.1380614343528163 0.9844950591538169 ['nc|ENSG00000170703|Q8N841-3|TTLL6', 'ENSG00000170703|ENST00000393382|TTLL6'] 19428 23130 ELPLFFYRKFR True PC9_epitope_Rep4 1514.8398049074997 1514.8387099358602 97.188 2 -0.49604236618712644 0.13807344014329784 0.9845646580343594 ['ENST00000327827.11_1_16:9212523-9212682:+|nuORF'] 106258 11609 SVQGFFLNH True NCI_RA007_Epitope_Rep3 1047.51377932951 1047.5126899358602 52.789 2 -0.49608211762609317 0.13807344014329784 0.9846393384558383 ['nc|ENSG00000180011|Q8N4Q0-2|PTGR3', 'ENSG00000180011|ENST00000322342|PTGR3'] 133499 9816 WGWWRWWEHRL True NCI_RA007_Epitope_Rep1 1696.81638412432 1696.8152899358602 42.185 2 -0.4961157514440192 0.13808773530143462 0.9847027492056362 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 115244 17322 TVDEDEEVDPA True H1975_Epitope_Rep2 1217.49355694705 1217.49190490379 71.922 3 -0.4961521193285057 0.13810202998540533 0.9847715450721756 ['ENSG00000148843|ENST00000369797|PDCD11'] 137701 12271 YMNWTYVFYF True NCI_RA007_Epitope_Rep5 1432.61619579272 1432.6150899358602 53.851 2 -0.4962145121912312 0.1381163241952336 0.9848901296320106 ['ENSG00000119899|ENST00000355773|SLC17A5', 'ENST00000481996.1_1_6:74344990-74351530:-|nuORF', 'nc|ENSG00000119899|Q9NRA2-2|SLC17A5'] 112613 16557 TPDFLNSL True PC9_epitope_Rep5 905.44944773745 905.44834993586 68.69 2 -0.4962727150846819 0.13814720222892965 0.985001386761006 ['nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2'] 109327 5295 TGGIQDLK True NCI_RA007_Epitope_Rep4 830.4497820906199 830.44868993586 26.919 2 -0.4963030548926691 0.1381592039800995 0.98505962605245 ['ENST00000510543.1_1_4:63683420-63684509:+|nuORF', 'ENST00000554011.5_1_14:57675329-57698504:-|nuORF', 'ENSG00000070367|ENST00000621441|EXOC5'] 14726 17056 DVSFMYLTFFL True PC9_epitope_Rep1 1381.66281163197 1381.66170993586 70.432 2 -0.4963141148041166 0.1381592039800995 0.9850808978166735 ['ENST00000557614.1_1_14:100803287-100808848:-|nuORF', 'nc|ENSG00000140105|P23381-2|WARS1', 'ENSG00000140105|ENST00000392882|WARS1'] 120971 24236 VGERKRSRQRL True PC9_epitope_Rep3 1383.8171124003097 1383.8160099358602 98.524 2 -0.49633863623375507 0.1381712049351597 0.9851281395484659 ['ENST00000320640.10_1_16:47493082-47495095:-|nuORF'] 125888 11338 VNSYFDSFL True NCI_RA007_Epitope_Rep2 1090.49712620586 1090.4960299358602 48.691 2 -0.496341779711012 0.1381712049351597 0.9851342035000192 ['nc|ENSG00000138308|Q9BX93-2|PLA2G12B', 'ENSG00000138308|ENST00000373032|PLA2G12B'] 34302 7706 GPPNPWPVG True PC9_epitope_Rep2 919.4552018242299 919.45410993586 35.017 2 -0.4963686932283414 0.13819978774210667 0.9851861946459987 ['ENST00000414660.1_1_X:44493047-44494475:+|nuORF'] 45465 5946 ISEIESNRSFS True H1975_Epitope_Rep2 1267.60444480871 1267.60334993586 27.853 2 -0.49639151363888917 0.13819978774210667 0.9852303817790703 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2', 'nc|ENSG00000119139|Q9UDY2-5|TJP2', 'nc|ENSG00000119139|Q9UDY2-4|TJP2', 'nc|ENSG00000119139|Q9UDY2-2|TJP2'] 81731 11904 PSALSPSCL True PC9_epitope_Rep6 873.4266041178901 873.42550993586 57.024 2 -0.49646081674171233 0.13823066080756155 0.9853651528612675 ['ENST00000322764.9_1_7:143086019-143087053:+|nuORF'] 136603 6347 YIAAHPSSTK True NCI_RA007_Epitope_Rep2 1073.55055876105 1073.54946993586 29.295 2 -0.49655498423417144 0.13826665119132497 0.9855496745100152 ['ENSG00000077264|ENST00000372007|PAK3', 'nc|ENSG00000077264|O75914|PAK3', 'nc|ENSG00000077264|O75914-4|PAK3', 'nc|ENSG00000077264|O75914-3|PAK3'] 136064 12421 YFWRIAWRFWR True NCI_RA007_Epitope_Rep1 1685.8731707244497 1685.87206993586 52.289 2 -0.49658273831242605 0.13826665119132497 0.985604364130304 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 39353 14795 HLTYIQKIFR True PC9_epitope_Rep2 1317.75574093037 1317.75409490379 62.172 3 -0.49659445612765407 0.13826665119132497 0.9856274953008123 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 1660 6971 AEGFEGTLC True NCI_RA007_Epitope_Rep3 925.3851332287298 925.38402993586 34.528 2 -0.4966069969900173 0.13826665119132497 0.9856522780474681 ['ENSG00000074181|ENST00000263388|NOTCH3', 'NOTCH3|p.A1802Gfs*8|2|0.18|ENSG00000074181|chr19:15166049-15166050|-/C|frameshift_variant'] 95529 20920 SAQPFLSLL True PC9_epitope_Rep4 974.54368247546 974.54258993586 88.628 2 -0.49662084105465315 0.13826665119132497 0.985679668225814 ['ENST00000328086.11_1_16:25268718-25268799:-|nuORF'] 76414 8884 NSRRRRRPAWR True H1975_Epitope_Rep2 1509.8613772541298 1509.85972490379 39.143 3 -0.49665053354944433 0.13826665119132497 0.9857385269173448 ['CCDC97|p.E232Sfs*48|1|0.27|ENSG00000142039|chr19:41319763-41319763|G/-|frameshift_variant'] 33071 5395 GKETRCSP True NCI_RA007_Epitope_Rep2 876.4123510360799 876.41124993586 25.604 2 -0.49666822596046567 0.13829751956492903 0.9857736706588243 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2', 'ENST00000440623.5_1_2:182756982-182781157:+|nuORF'] 69358 14482 LVQAFQFTDK True PC9_epitope_Rep6 1195.62372370131 1195.62262993586 67.588 2 -0.49669735537781434 0.1383095135457771 0.9858316493268415 ['ENSG00000117450|ENST00000319248|PRDX1', 'ENST00000449329.2_1_9:12972844-12973225:-|nuORF'] 45607 9607 ISGTGSNLQAL True PC9_epitope_Rep5 1059.55603806431 1059.5549499358601 41.916 2 -0.4967060026640465 0.1383095135457771 0.9858488884826481 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 56394 9110 LDRYGRTVL True PC9_epitope_Rep4 1091.60874234351 1091.60764993586 42.628 2 -0.49676021526534275 0.1383735389206665 0.9859572521201339 ['ENSG00000222036|ENST00000547889|POTEM'] 1657 4806 AEGEKHTEK True H1975_Epitope_Rep3 1027.4934378077498 1027.4923499358601 23.615 2 -0.49679261483858056 0.1384044034750315 0.9860222467457953 ['ENST00000418257.1_1_10:91122507-91122987:+|nuORF'] 3271 8924 AGFVGDDAPR True PC9_epitope_Rep2 1003.4723084403498 1003.47120993586 39.684 2 -0.49684038427877725 0.13843067690114225 0.9861183848094147 ['POTEE|p.A722V|1|0.33|ENSG00000188219|chr2:131263620-131263620|C/T|missense_variant'] 54603 12411 LADEFGVA True H1975_Epitope_Rep1 820.3966838885999 820.39613496793 52.773 1 -0.4968555165860934 0.13843067690114225 0.9861489154636421 ['nc|ENSG00000051180|Q06609-2|RAD51', 'ENSG00000051180|ENST00000267868|RAD51', 'nc|ENSG00000051180|Q06609-4|RAD51'] 110943 15133 TLCFDKESL True PC9_epitope_Rep1 1054.50049733414 1054.49940993586 63.029 2 -0.49687583417958603 0.13843067690114225 0.9861899648354965 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 12852 5972 DLLEEEARQG True NCI_RA007_Epitope_Rep2 1158.5516809598598 1158.5505899358602 27.839 2 -0.49694011123447046 0.13847811671087534 0.9863202531160259 ['ENST00000535399.1_1_12:132195753-132198841:+|nuORF'] 65502 7635 LSFRWRENRCY True H1975_Epitope_Rep1 1528.7357508451198 1528.73464993586 34.353 2 -0.49702615698438724 0.13850668081297038 0.9864956485315325 ['ENST00000563604.1_1_15:43017281-43017455:-|nuORF'] 57473 13907 LEKEHEAI True PC9_epitope_Rep1 967.4974605590298 967.49636993586 58.331 2 -0.4970495155252187 0.13850668081297038 0.9865434514246684 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 66386 8658 LSRDGQVYL True H1975_Epitope_Rep3 1049.5505587610498 1049.54946993586 38.299 2 -0.49708791975638805 0.13851636966431827 0.9866222163264448 ['ENST00000471308.5_1_3:51992122-51994256:-|nuORF'] 46655 14863 ITVGPVQKL True PC9_epitope_Rep1 953.59096702105 953.58986993586 61.99 2 -0.49711714557220377 0.13851636966431827 0.9866822974033427 ['ENSG00000129083|ENST00000439561|COPB1'] 59409 13777 LGLRPLHQL True PC9_epitope_Rep5 1045.63964854897 1045.63854993586 58.012 2 -0.4971353254590243 0.13851636966431827 0.9867197312047284 ['ENST00000318430.9_1_17:76134666-76137438:+|nuORF'] 42260 8178 IEHSPTTIP True H1975_Epitope_Rep1 993.5131106231701 993.51200993586 36.397 2 -0.4971585321520736 0.1385449301307872 0.9867675821450864 ['nc|ENSG00000047849|P27816-3|MAP4'] 126284 8999 VPHLLTEA True PC9_epitope_Rep6 878.48616759934 878.48561496793 44.639 1 -0.4971768583290944 0.1385449301307872 0.9868054219370418 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 81433 5333 PQEQQQYWYRQ True H1975_Epitope_Rep1 1552.70589018548 1552.7047899358602 25.575 2 -0.4971905446675194 0.13855920965389207 0.9868337111856421 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant', 'YLPM1|p.P426Hfs*9|1|0.19|ENSG00000119596|chr14:74780567-74780567|C/-|frameshift_variant'] 112581 6895 TPAPPGPAT True PC9_epitope_Rep3 807.41266830591 807.41156993586 31.536 2 -0.49723809617985615 0.1385711917785513 0.9869321938742666 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 20714 5637 EQKREQYRQVR True NCI_RA007_Epitope_Rep1 1518.80152190582 1518.7998749037902 25.987 3 -0.49727997058669154 0.1385711917785513 0.9870191652848018 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3', 'ENST00000570131.1_1_16:1812897-1813838:+|nuORF'] 124726 4034 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 21.775 3 -0.49739207922544587 0.13859974806073064 0.9872531055152678 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 74441 14061 NIYLRYTEFRS True H1975_Epitope_Rep3 1460.7412130650398 1460.7401099358601 59.409 2 -0.49740851202498887 0.13859974806073064 0.9872875260875198 ['SNX29|p.R693L|1|0.24|ENSG00000048471|chr16:12477759-12477759|G/T|missense_variant'] 55892 14917 LDGFLKHV True H1975_Epitope_Rep1 927.5178020807899 927.51670993586 62.615 2 -0.4974940264491727 0.13866145125468227 0.987467160612335 ['ENSG00000219626|ENST00000615575|FAM228B'] 9206 19284 AVPGPGGIWSV True PC9_epitope_Rep6 1038.5498304850598 1038.5487299358601 86.822 2 -0.49752057845504827 0.13866145125468227 0.9875231075336698 ['ENSG00000185085|ENST00000330574|INTS5'] 109387 4966 TGLSTAVLAA True H1975_Epitope_Rep2 902.5072969667399 902.50618993586 24.185 2 -0.497557227563624 0.13866653408243423 0.987600458714355 ['nc|ENSG00000213689|Q9NSU2-2|TREX1', 'ENSG00000213689|ENST00000625293|TREX1', 'nc|ENSG00000213689|Q9NSU2-1|TREX1'] 13730 14981 DQIYRRETERK True H1975_Epitope_Rep1 1492.7746384516397 1492.77354993586 62.869 2 -0.49756274663912997 0.13866653408243423 0.9876121199804061 ['ENST00000285279.9_1_7:55540109-55540292:-|nuORF'] 111122 12585 TLEMQKSL True PC9_epitope_Rep1 948.4950180308799 948.49392993586 53.275 2 -0.4975643922132019 0.13866653408243423 0.9876155975581037 ['ENST00000439830.5_1_3:15793291-15836743:-|nuORF'] 124782 15473 VLKWQQIL True PC9_epitope_Rep5 1026.6226015025 1026.62150993586 64.528 2 -0.49760860070789964 0.13866653408243423 0.9877091319542568 ['ENST00000500268.6_1_4:10456341-10456455:-|nuORF'] 1720 15063 AEGQEVLFG True PC9_epitope_Rep1 948.4552613938798 948.45471496793 62.758 1 -0.4976124456878793 0.13866653408243423 0.9877172768177169 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-6|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R', 'nc|ENSG00000164078|Q04912-3|MST1R', 'nc|ENSG00000164078|Q04912-4|MST1R'] 70271 18084 LYNSILKQV True PC9_epitope_Rep5 1076.6229954253201 1076.62188993586 74.573 2 -0.4976605741164865 0.13871165542500125 0.9878193579601195 ['WDR49|p.K409Sfs*23|1|0.16|ENSG00000174776|chr3:167529178-167529178|C/-|frameshift_variant', 'ENSG00000174776|ENST00000682715|WDR49', 'nc|ENSG00000174776|Q8IV35-3|CFAP337'] 65265 11887 LSEHEVPP True PC9_epitope_Rep1 906.44469671018 906.44358993586 50.589 2 -0.4976654588218803 0.13871165542500125 0.9878297317975551 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 57064 4966 LEEIYELHA True H1975_Epitope_Rep3 1115.54989005471 1115.5487899358602 24.23 2 -0.49770158407177156 0.13874250107719333 0.9879065269320383 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'ADGRV1|p.P1502L|3|0.18|ENSG00000164199|chr5:90658031-90658031|C/T|missense_variant'] 57588 6235 LELHKENLNLR True H1975_Epitope_Rep1 1377.7728475464899 1377.77119490379 29.05 3 -0.4977581505339508 0.1387899176375056 0.9880270338522156 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 101374 11123 SMRDRKMSL True NCI_RA007_Epitope_Rep3 1122.56378338038 1122.5626899358601 50.854 2 -0.497794562022789 0.13879958903655587 0.988104764747053 ['ENST00000574364.1_1_16:11945736-11989464:+|nuORF'] 94152 3797 RWHELRRFWIR True NCI_RA007_Epitope_Rep5 1653.9116814914896 1653.9105899358601 20.786 2 -0.4978293826241251 0.13879958903655587 0.9881792138895574 ['ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 119683 14821 VESVQVIYG True PC9_epitope_Rep1 992.5178616504397 992.51731496793 61.829 1 -0.4978325539576589 0.13879958903655587 0.9881859999006561 ['TMEM200A|p.G352Wfs*70|1|0.24|ENSG00000164484|chr6:130441473-130441474|-/T|frameshift_variant'] 2850 6271 AEVWSEITV True H1975_Epitope_Rep2 1032.51277627 1032.51166993586 29.066 2 -0.49793361919350143 0.13882582975691396 0.9884027186746733 ['nc|ENSG00000188343|A1XBS5-5|CIBAR1', 'ENST00000523577.5_1_8:94712794-94713716:+|nuORF'] 56562 5076 LDVSDEKMV True NCI_RA007_Epitope_Rep4 1034.4954119536999 1034.4943099358602 26.029 2 -0.4979473983826373 0.13882582975691396 0.9884323328608272 ['ENST00000472184.1_1_21:30380697-30391601:-|nuORF'] 34593 8389 GQGQETSGPP True H1975_Epitope_Rep2 956.4199385143198 956.41884993586 37.221 2 -0.49797688767934545 0.13882582975691396 0.9884957628835547 ['ENSG00000027847|ENST00000029410|B4GALT7'] 32932 24305 GIQMSFQSTA True H1975_Epitope_Rep3 1068.4909952796 1068.4898899358602 101.22 2 -0.4980015529061764 0.13883779887657205 0.9885488696503111 ['nc|ENSG00000179242|P55283-2|CDH4', 'ENSG00000179242|ENST00000614565|CDH4'] 57550 6618 LELADEAR True PC9_epitope_Rep1 915.4661604307499 915.46506993586 30.258 2 -0.49802534535428855 0.13883779887657205 0.9886001419907742 ['ENSG00000180667|ENST00000315927|YOD1', 'nc|ENSG00000180667|Q5VVQ6-2|YOD1'] 98616 12775 SINSHATEWSP True H1975_Epitope_Rep2 1227.55201531303 1227.55090993586 54.243 2 -0.49810085092154355 0.13886403552374324 0.9887631353505443 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 65739 21176 LSIDEEVYF True PC9_epitope_Rep3 1113.52300660053 1113.52190993586 86.741 2 -0.49810101724829714 0.13886403552374324 0.9887634948543963 ['ENST00000568329.5_1_15:75091021-75093212:+|nuORF', 'ENSG00000103653|ENST00000220003|CSK'] 118733 14411 VEDEGNYTCL True PC9_epitope_Rep5 1141.45975472097 1141.4586499358602 60.431 2 -0.49810396920259453 0.13886403552374324 0.9887698756253458 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'nc|ENSG00000073008|P15151-3|PVR', 'nc|ENSG00000073008|P15151-2|PVR', 'ENST00000187830.2_1_19:45147391-45165075:+|nuORF'] 58563 15617 LFEDYNEI True H1975_Epitope_Rep2 1041.46549172441 1041.46438993586 65.227 2 -0.49814891997419386 0.1388737014762165 0.9888671132629002 ['nc|ENSG00000080644|P32297-3|CHRNA3', 'nc|ENSG00000080644|P32297-1|CHRNA3', 'ENSG00000080644|ENST00000326828|CHRNA3'] 53051 7343 KRYRERQRQHK True NCI_RA007_Epitope_Rep4 1583.8869232956297 1583.88582993586 34.883 2 -0.49818306037989674 0.1388737014762165 0.9889410569328109 ['ENST00000514900.5_1_3:129122974-129137267:-|nuORF', 'ENST00000503498.1_1_3:129120438-129130339:-|nuORF', 'ENSG00000172771|ENST00000505956|EFCAB12'] 84349 21502 QFVVTTNPV True PC9_epitope_Rep2 1003.5338460677499 1003.53274993586 88.176 2 -0.49818940733324135 0.1388737014762165 0.9889548120120355 ['ENSG00000039068|ENST00000261769|CDH1', 'ENST00000562836.5_1_16:68797408-68867399:+|nuORF'] 62899 24276 LMTFFLAL True PC9_epitope_Rep2 954.5248616071799 954.52376993586 98.92 2 -0.4982376265188245 0.13890453626694058 0.9890593956467979 ['ENSG00000174669|ENST00000357440|SLC29A2'] 40764 21046 HVDEFLTFV True PC9_epitope_Rep2 1105.54441075145 1105.5433099358602 86.408 2 -0.4982606472610315 0.13891880249838467 0.989109376253135 ['ENSG00000142623|ENST00000375471|PADI1'] 654 5748 AATRRSPWTGP True NCI_RA007_Epitope_Rep4 1198.6207040095398 1198.6190549037901 28.729 3 -0.49829475288655467 0.13892386190444636 0.989183480854949 ['ENST00000261226.8_1_12:94976313-95044322:-|nuORF'] 95375 6415 SAIERKRSW True NCI_RA007_Epitope_Rep5 1131.61489035311 1131.61378993586 31.346 2 -0.4983149262597036 0.13892386190444636 0.9892273448005569 ['ENST00000230792.6_1_5:102891723-102894638:-|nuORF'] 34630 8358 GQIFQQKRNY True PC9_epitope_Rep4 1280.66256882152 1280.66092490379 39.606 3 -0.49832710485935916 0.13892386190444636 0.9892538362745306 ['ENSG00000104321|ENST00000262209|TRPA1', 'TRPA1|p.A789T|1|0.39|ENSG00000104321|chr8:72038003-72038003|C/T|missense_variant'] 106643 19874 SWYIPICLMPS True NCI_RA007_Epitope_Rep5 1308.6246523014397 1308.62299490379 83.357 3 -0.49833472353658487 0.13892386190444636 0.9892704129081762 ['ENST00000564747.1_1_16:27472673-27473321:-|nuORF'] 139743 6731 YTYRYFIHNWP True H1975_Epitope_Rep1 1558.7357337617798 1558.7340749037903 30.934 3 -0.4983528594584316 0.13892386190444636 0.9893098854004241 ['nc|ENSG00000139977|Q147X3-2|NAA30', 'ENSG00000139977|ENST00000556492|NAA30'] 124830 19002 VLLLGDVATL True PC9_epitope_Rep3 1012.61684741572 1012.61574993586 78.312 2 -0.4983759092529336 0.13893812639774705 0.9893600778112766 ['nc|ENSG00000123191|P35670-2|ATP7B', 'nc|ENSG00000123191|P35670-3|ATP7B', 'nc|ENSG00000123191|P35670-4|ATP7B', 'ENSG00000123191|ENST00000242839|ATP7B'] 36921 4007 GVQYSHDANAQ True NCI_RA007_Epitope_Rep4 1188.51596415748 1188.5148699358601 21.667 2 -0.4983969903722061 0.13895239041844748 0.9894060070874675 ['ATP10A|p.E448Q|1|0.38|ENSG00000206190|chr15:25721678-25721678|C/G|missense_variant'] 97533 7886 SGTSDPYVKI True H1975_Epitope_Rep1 1065.5342399905699 1065.5331499358601 35.285 2 -0.4985407686649435 0.13897861485199356 0.9897198089786243 ['ENSG00000170743|ENST00000318881|SYT9'] 129376 16833 VTEEKANII True PC9_epitope_Rep4 1015.5549754351498 1015.55386993586 72.725 2 -0.498571919205273 0.13897861485199356 0.9897879108081703 ['UGT2A3|p.Q331Tfs*23|1|0.24|ENSG00000135220|chr4:68932633-68932634|-/T|frameshift_variant', 'ENSG00000135220|ENST00000251566|UGT2A3'] 124749 6607 VLKKKKKKKK True PC9_epitope_Rep5 1254.92274668582 1254.9211049037901 30.386 3 -0.4985844810234512 0.13897861485199356 0.9898153839848599 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 17936 12827 EIELVIHRLEA True NCI_RA007_Epitope_Rep1 1320.7401504358802 1320.73904993586 53.883 2 -0.4986134505086551 0.1389905749449239 0.9898787629337752 ['nc|ENSG00000141577|Q9UPN4-3|CEP131', 'ENSG00000141577|ENST00000450824|CEP131', 'nc|ENSG00000141577|Q9UPN4|CEP131'] 110857 9943 TLAAGYQNFI True NCI_RA007_Epitope_Rep5 1096.55530978832 1096.5542099358602 44.887 2 -0.49863047770411745 0.1389905749449239 0.9899160282454728 ['ENSG00000164855|ENST00000297477|TMEM184A', 'ENST00000468535.5_1_7:1586590-1589169:-|nuORF'] 120613 15369 VGAGLGASL True PC9_epitope_Rep5 743.41775368635 743.41720496793 64.126 1 -0.49868940140094936 0.1390499221519197 0.9900450588187445 ['ENST00000356384.4_1_9:137329758-137329917:+|nuORF'] 16993 18488 EGIIHSLVLRN True PC9_epitope_Rep5 1249.7142700412098 1249.7131699358602 76.137 2 -0.49871850493758446 0.1390499221519197 0.9901088272625155 ['ENSG00000158863|ENST00000289921|FHIP2B', 'ENST00000462914.3_1_8:21957359-21958496:+|nuORF', 'ENST00000491733.2_1_8:21958038-21958496:+|nuORF'] 57241 13145 LEFLASNDP True PC9_epitope_Rep2 1004.48147614172 1004.48036993586 55.834 2 -0.4987189507279998 0.1390499221519197 0.9901098042095172 ['nc|ENSG00000266074|Q9P281|BAHCC1'] 109266 7398 TGANVILTTG True PC9_epitope_Rep4 945.51311062317 945.51200993586 35.803 2 -0.4987372451563391 0.1390618788922751 0.9901499008405444 ['ENSG00000120438|ENST00000321394|TCP1', 'ENST00000414406.2_1_12:20095069-20095366:+|nuORF'] 858 12276 ADIGVNSL True NCI_RA007_Epitope_Rep1 787.40758292547 787.40648993586 51.72 2 -0.49876469850474814 0.1390618788922751 0.9902100872462654 ['ENSG00000251664|ENST00000398631|PCDHA12', 'nc|ENSG00000251664|Q9UN75-2|PCDHA12'] 14617 14538 DVLKFLAA True H1975_Epitope_Rep3 875.5116540711899 875.51054993586 61.288 2 -0.49883540347399363 0.13910695948855542 0.9903651725874507 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000477325.1_1_3:39449144-39450287:+|nuORF'] 36132 11250 GVERLTDLH True PC9_epitope_Rep6 1038.5458077337798 1038.54470993586 54.273 2 -0.49885987969596696 0.13910695948855542 0.9904188817984704 ['ENST00000414035.5_1_7:100875905-100880680:-|nuORF', 'ENST00000308344.9_1_7:100875905-100880710:-|nuORF'] 130627 21952 VVAGRRKS True PC9_epitope_Rep5 871.53518348043 871.53408993586 89.475 2 -0.49888337855649 0.1391189135475323 0.9904704557380231 ['ENSG00000151952|ENST00000422113|TMEM132D', 'TMEM132D|p.Q218H|1|0.14|ENSG00000151952|chr12:129700124-129700124|C/G|missense_variant'] 41831 6345 IDSRVQEY True PC9_epitope_Rep6 1008.4876241513198 1008.48652993586 32.979 2 -0.4989289168470889 0.1391189135475323 0.9905704232463421 ['ENSG00000149346|ENST00000334534|SLX4IP'] 32864 5784 GIKVGDDKCFL True NCI_RA007_Epitope_Rep3 1193.6114447654497 1193.60980490379 29.73 3 -0.4989767902815056 0.13914973253175666 0.9906755430343821 ['ENSG00000197892|ENST00000524189|KIF13B'] 127569 6646 VQWDCASPDP True H1975_Epitope_Rep3 1116.4546097708799 1116.4535099358602 30.519 2 -0.4990750820505391 0.13921367294889206 0.9908914216782664 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 47802 15571 IYRDLRLDNL True PC9_epitope_Rep5 1289.7091846607698 1289.7075449037902 64.903 3 -0.499105707906862 0.139227928390441 0.9909586910925373 ['PKN3|p.K686R|1|0.22|ENSG00000160447|chr9:128718557-128718557|A/G|missense_variant'] 3122 5721 AGDEGGKAFFK True NCI_RA007_Epitope_Rep1 1125.5454733806098 1125.54436993586 26.31 2 -0.49915085782420715 0.1392421833598304 0.9910578603323398 ['ENST00000444439.1_1_7:54487838-54488018:+|nuORF'] 125194 14902 VLQGNPLALVP True PC9_epitope_Rep1 1119.6651945904698 1119.6640899358601 62.14 2 -0.499297717979929 0.13935580028152686 0.9913803378924977 ['ENSG00000158113|ENST00000339777|LRRC43', 'nc|ENSG00000158113|Q8N309-2|LRRC43', 'nc|ENSG00000158113|Q8N309-3|LRRC43'] 108494 8025 TEFCAPCPSSP True H1975_Epitope_Rep2 1137.44708186229 1137.44598993586 35.816 2 -0.49935289223642926 0.13937005266121286 0.9915014208816353 ['ENST00000359904.7_1_17:66244373-66244691:+|nuORF'] 33639 13137 GLNLLGKRKTR True NCI_RA007_Epitope_Rep4 1254.7884380409798 1254.7873499358602 57.63 2 -0.4993620772058292 0.1393727646045834 0.9915215726400086 ['nc|ENSG00000154889|Q53F39-4|MPPE1', 'ENSG00000154889|ENST00000588072|MPPE1'] 81893 18736 PSLLSRCMNCA True PC9_epitope_Rep1 1193.5355200272102 1193.53387490379 76.857 3 -0.4993624232644887 0.1393727646045834 0.9915223318588827 ['ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 46459 17881 ITNCLKLL True PC9_epitope_Rep5 916.54157430048 916.54046993586 73.797 2 -0.4993847078793183 0.1393727646045834 0.9915712171337313 ['ENSG00000118308|ENST00000556887|IRAG2', 'nc|ENSG00000118308|Q12912|IRAG2'] 5899 6174 APGVPRSGL True PC9_epitope_Rep6 852.48175092524 852.48064993586 32.191 2 -0.4993940267415244 0.1393727646045834 0.9915916566915595 ['ENST00000401869.5_1_2:242447465-242447588:-|nuORF'] 68923 8116 LVFLQVFKC True H1975_Epitope_Rep3 1095.61507359391 1095.61396993586 36.194 2 -0.4994349372428233 0.1393727646045834 0.9916813649739807 ['ENST00000264170.8_1_2:143742732-143743560:+|nuORF'] 71471 19591 MKILFNVV True PC9_epitope_Rep4 962.5623097450599 962.56120993586 83.48 2 -0.4994556417297117 0.1393727646045834 0.991726750339319 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.W992Mfs*12|1|0.31|ENSG00000163939|chr3:52587502-52587503|-/T|frameshift_variant', 'PBRM1|p.P1361Hfs*23|1|0.28|ENSG00000163939|chr3:52563287-52563287|G/-|frameshift_variant'] 128261 11257 VSAGENGGFL True PC9_epitope_Rep4 949.4505103666098 949.44940993586 51.073 2 -0.4995794659412028 0.13942013147219048 0.991997925488407 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20'] 90904 17088 RLDLAFAWLY True PC9_epitope_Rep5 1266.67609362734 1266.6744449037901 70.75 3 -0.49966863540569273 0.13947712634733514 0.9921928837809172 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 64213 6666 LQIHSAGGRAK True NCI_RA007_Epitope_Rep1 1136.6414394541198 1136.63980490379 29.94 3 -0.49969783069503015 0.13947712634733514 0.9922566469958249 ['ENSG00000186513|ENST00000641291|OR9Q2'] 116972 21010 TYPNTYIF True PC9_epitope_Rep1 1017.48074786573 1017.4801749679301 85.643 1 -0.4997564858964498 0.13947712634733514 0.9923846379065039 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 13913 16124 DRDVYLVI True PC9_epitope_Rep4 991.53384606775 991.53274993586 69.961 2 -0.4997871377702417 0.13947712634733514 0.9924514588840586 ['ENST00000591098.1_1_18:43684359-43698283:+|nuORF', 'ENSG00000152240|ENST00000282058|HAUS1'] 19814 12797 ELTQSICLRI True PC9_epitope_Rep1 1174.6379938664597 1174.6368899358602 54.097 2 -0.499875081101649 0.13948675496688742 0.9926429084367674 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 139161 13102 YSSFQMDKLE True PC9_epitope_Rep5 1246.55398945898 1246.55288993586 55.402 2 -0.49990750550556623 0.13948675496688742 0.9927133883992081 ['nc|ENSG00000159263|Q14190-2|SIM2', 'ENST00000481185.1_1_21:38072046-38117571:+|nuORF', 'ENSG00000159263|ENST00000290399|SIM2'] 78859 7889 PESEGYLQEEK True NCI_RA007_Epitope_Rep2 1307.58812603823 1307.58702993586 35.318 2 -0.49992641996102305 0.13948675496688742 0.992754473987079 ['ENSG00000138180|ENST00000371485|CEP55', 'nc|ENSG00000138180|Q53EZ4-2|CEP55'] 107864 5705 TASELLLDR True NCI_RA007_Epitope_Rep3 1016.5502244078799 1016.54912993586 29.416 2 -0.5001037078852252 0.13954835932585014 0.9931384694979019 ['ENSG00000103335|ENST00000301015|PIEZO1'] 62485 21143 LLSPGSVLVL True PC9_epitope_Rep3 996.62193279616 996.62082993586 86.612 2 -0.5001204060664795 0.13954835932585014 0.9931745255642453 ['ENST00000498749.1_1_2:73114531-73115553:+|nuORF', 'ENSG00000116096|ENST00000234454|SPR'] 68572 7511 LTYDHSWVLLK True PC9_epitope_Rep3 1373.73433677945 1373.73268490379 33.894 3 -0.500165628212776 0.13955798361062827 0.9932720686794502 ['PTPRN2|p.R786W|2|0.43|ENSG00000155093|chr7:157604064-157604064|G/A|missense_variant'] 123663 10940 VIMWDPYT True H1975_Epitope_Rep2 1023.4735543103099 1023.47244993586 47.115 2 -0.5002139726782279 0.13955798361062827 0.9933761722300012 ['nc|ENSG00000176871|Q9NYS7-2|WSB2', 'ENSG00000176871|ENST00000315436|WSB2', 'nc|ENSG00000176871|Q9NYS7-3|WSB2'] 113368 10547 TQLEAAEW True H1975_Epitope_Rep3 946.4396113297398 946.43850993586 45.635 2 -0.5002166846249338 0.13955798361062827 0.9933820065596606 ['AASS|p.D834Rfs*21|1|0.27|ENSG00000008311|chr7:122078000-122078001|-/T|frameshift_variant', 'ENSG00000008311|ENST00000417368|AASS', 'ENST00000426162.1_1_7:121719305-121721557:-|nuORF'] 110555 12554 TIRTTKWEL True PC9_epitope_Rep4 1146.6397081186199 1146.63805490379 56.111 3 -0.5003285960921289 0.13961958051219228 0.9936222322243321 ['ENSG00000154237|ENST00000388948|LRRK1', 'LRRK1|p.D828Afs*9|1|0.45|ENSG00000154237|chr15:101027336-101027354|GGACGTGGGCAGCACCATC/-|frameshift_variant', 'LRRK1|p.R1305Pfs*82|1|0.11|ENSG00000154237|chr15:101053277-101053278|-/C|frameshift_variant'] 15046 3409 EAAERVESA True H1975_Epitope_Rep1 960.4512386425998 960.4501499358599 17.282 2 -0.5003579617396139 0.13961958051219228 0.993685087593907 ['nc|ENSG00000230487|Q96PY0|PSMG3-AS1', 'ENST00000437621.6_1_7:1626575-1627631:+|nuORF'] 19127 12797 ELILSSNKITY True H1975_Epitope_Rep3 1279.70236794483 1279.7012699358602 54.44 2 -0.5004257970357043 0.13962457789843077 0.9938299821913112 ['LRRTM4|p.P406Qfs*33|1|0.25|ENSG00000176204|chr2:77518652-77518652|G/-|frameshift_variant', 'nc|ENSG00000176204|Q86VH4-2|LRRTM4', 'ENSG00000176204|ENST00000409884|LRRTM4'] 131369 7284 VVSHQDSI True PC9_epitope_Rep2 883.43994568291 883.43884993586 33.404 2 -0.5004477200833823 0.13962457789843077 0.9938767161468688 ['ENSG00000120733|ENST00000314358|KDM3B', 'KDM3B|p.A1619Rfs*25|1|0.09|ENSG00000120733|chr5:138429926-138429927|-/C|frameshift_variant', 'ENST00000512928.1_1_5:137708527-137717285:+|nuORF'] 27003 16534 FLLFQMYKLWD True PC9_epitope_Rep3 1502.76319437958 1502.76208993586 68.736 2 -0.5004576537741687 0.13962457789843077 0.9938978767033407 ['ENST00000319725.9_1_9:133512585-133512708:+|nuORF'] 76421 11663 NSTFSEIFKK True PC9_epitope_Rep4 1199.6186383208699 1199.61700490379 52.623 3 -0.5005126841404969 0.13962457789843077 0.9940149240437104 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000469678.1_1_3:53259917-53265542:-|nuORF', 'ENST00000460343.5_1_3:53261754-53265639:-|nuORF'] 39907 13338 HQLESILAM-[Oxidation] True PC9_epitope_Rep2 1056.5273811687598 1056.5262899358602 56.577 2 -0.5005660534046552 0.13962457789843077 0.9941281431470738 ['ENST00000264110.6_1_2:176001189-176015807:-|nuORF'] 85656 7891 QLQKNADQVEK True H1975_Epitope_Rep1 1299.67827845531 1299.67718993586 35.304 2 -0.5006107920614162 0.13963650809415037 0.9942228210032656 ['ENSG00000118898|ENST00000345988|PPL'] 100578 18837 SLQDSHFLT True PC9_epitope_Rep1 1046.50327421546 1046.5021699358601 77.241 2 -0.5006196334319908 0.13963650809415037 0.9942415058359638 ['ENSG00000101144|ENST00000395863|BMP7'] 93371 23396 RRVRMVVLA True PC9_epitope_Rep1 1098.6808021682998 1098.67970993586 94.776 2 -0.5007507856458392 0.13968385334767855 0.9945176400132658 ['ENST00000525154.1_1_11:9779436-9779646:-|nuORF'] 44502 4754 INYTEKEGP True NCI_RA007_Epitope_Rep4 1049.5029398622898 1049.50184993586 24.72 2 -0.500813213974336 0.13971464512711865 0.9946483687133598 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000546416.5_1_12:95425225-95443026:-|nuORF', 'nc|ENSG00000120798|P13056-2|NR2C1', 'nc|ENSG00000120798|P13056-3|NR2C1'] 71795 6874 MNQVLHLIR True NCI_RA007_Epitope_Rep3 1122.6331832695398 1122.6315449037902 34.148 3 -0.5008545999022762 0.13974543588725027 0.9947347684168157 ['ENST00000519966.5_1_8:87492545-87498738:-|nuORF'] 102401 5202 SPVTTDQP True H1975_Epitope_Rep2 843.3974121645899 843.39686496793 25.081 1 -0.5008780238905435 0.1397596742692575 0.9947835737692823 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1'] 112339 20081 TMRFPWLQFWR True NCI_RA007_Epitope_Rep2 1566.7918091692595 1566.7907099358601 83.113 2 -0.5009445256215292 0.1397669722948595 0.9949217468556214 ['CLMN|p.K654Sfs*91|1|0.27|ENSG00000165959|chr14:95203388-95203388|T/-|frameshift_variant'] 10858 12884 DALMSSVP True PC9_epitope_Rep1 818.3844049527399 818.38330993586 54.431 2 -0.5010094812373883 0.1397669722948595 0.9950561383021058 ['ENSG00000102595|ENST00000376747|UGGT2', 'ENST00000463054.1_1_13:96529939-96547453:-|nuORF'] 33881 6850 GLWIWRYQEKK True H1975_Epitope_Rep1 1505.8143184356497 1505.81266490379 31.392 3 -0.5010123797333956 0.1397669722948595 0.9950621217830701 ['ENSG00000206190|ENST00000555815|ATP10A'] 120221 22677 VFMGTIKLT True PC9_epitope_Rep2 1008.5677890483199 1008.56668993586 92.721 2 -0.5010197713896913 0.1397669722948595 0.99507737541083 ['ENSG00000126950|ENST00000372930|TMEM35A'] 15964 6856 EDVFVRAISKM True H1975_Epitope_Rep1 1293.6751076511698 1293.6734549037901 31.417 3 -0.5010748308343068 0.1397788958029922 0.9951907569559134 ['ENST00000251241.8_1_17:57679886-57679970:+|nuORF'] 84121 17122 QEQLLENI True PC9_epitope_Rep5 985.5080252427299 985.50692993586 70.88 2 -0.5010785659623983 0.1397788958029922 0.9951984329986243 ['ENSG00000185122|ENST00000528838|HSF1', 'nc|ENSG00000185122|Q00613-2|HSF1', 'ENST00000532338.5_1_8:145533073-145533583:+|nuORF'] 57911 13944 LEQKYVQLF True NCI_RA007_Epitope_Rep4 1166.6335601090198 1166.6324699358602 60.912 2 -0.5010971261366743 0.13979081852182834 0.9952365462374722 ['ENSG00000214929|ENST00000344803|SPATA31D1', 'ENSG00000189357|ENST00000419782|SPATA31D4', 'ENSG00000186788|ENST00000445385|SPATA31D3'] 61835 20366 LLLASGCW True PC9_epitope_Rep3 861.44186025921 861.44076993586 83.586 2 -0.5011037234256058 0.13979081852182834 0.9952500817796215 ['ENSG00000184022|ENST00000642090|OR2T10', 'OR2T10|p.V248Sfs*25|1|0.13|ENSG00000184022|chr1:248593027-248593027|C/-|frameshift_variant', 'OR2T10|p.F150L|1|0.03|ENSG00000184022|chr1:248593319-248593319|A/C|missense_variant'] 131416 24044 VVTLLSNY True PC9_epitope_Rep2 907.50148331031 907.5009349679301 97.988 1 -0.5011688330795131 0.13983583769113656 0.9953833245013556 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 49438 8749 KIMNMIKLY True PC9_epitope_Rep2 1152.6399084427599 1152.63826490379 39.011 3 -0.50121490786672 0.13983583769113656 0.9954772314501902 ['ENSG00000143368|ENST00000271628|SF3B4'] 10785 11255 DAAIANAFRR True H1975_Epitope_Rep1 1103.5835902248298 1103.5824899358602 48.269 2 -0.5012299970326082 0.13984775773622374 0.9955079150517075 ['nc|ENSG00000171453|O15160-2|POLR1C', 'ENSG00000171453|ENST00000642195|POLR1C', 'ENST00000481352.6_1_6:43484832-43487644:+|nuORF', 'ENST00000512472.5_1_6:43484832-43487226:+|nuORF'] 72616 12098 MVVQATGGP True PC9_epitope_Rep3 858.4269384710599 858.4263849679301 51.576 1 -0.5012534502056392 0.13984775773622374 0.9955555370006886 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 107545 5220 TADNVSSSTP True NCI_RA007_Epitope_Rep5 977.4301688448501 977.42906993586 26.774 2 -0.5012686208732681 0.1398550484826422 0.9955862956346024 ['ENSG00000077157|ENST00000608999|PPP1R12B', 'nc|ENSG00000077157|O60237-6|PPP1R12B'] 93592 5316 RSWWPRWWWAP True NCI_RA007_Epitope_Rep2 1612.7840213668799 1612.78237490379 25.299 3 -0.5012799649164232 0.1398550484826422 0.9956092721767615 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 134049 18628 WQGRRRASRRL True NCI_RA007_Epitope_Rep4 1440.82868014352 1440.82758993586 80.575 2 -0.501311238697652 0.1398550484826422 0.9956725095290347 ['TUT1|p.R782S|1|0.18|ENSG00000149016|chr11:62575375-62575375|G/T|missense_variant'] 32513 18458 GGPLALDIP True PC9_epitope_Rep4 851.47526856247 851.47472496793 79.068 1 -0.5013504190056677 0.1398550484826422 0.9957515132123795 ['nc|ENSG00000133454|Q8IUG5-2|MYO18B', 'ENSG00000133454|ENST00000335473|MYO18B', 'nc|ENSG00000133454|Q8IUG5-3|MYO18B'] 28337 18079 FSASHTLPAL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 74.843 2 -0.5014753609154894 0.13998047553650908 0.9960017565621282 ['nc|ENSG00000132297|C9JL84-2|HHLA1', 'ENSG00000132297|ENST00000414222|HHLA1'] 103081 7043 SQLKKFYNQ True NCI_RA007_Epitope_Rep3 1154.6084079903399 1154.60730993586 34.822 2 -0.501476978036178 0.13998047553650908 0.9960049781664889 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.H695Tfs*6|1|0.19|ENSG00000151655|chr10:7738744-7738745|-/A|frameshift_variant', 'ITIH2|p.T482M|1|0.08|ENSG00000151655|chr10:7730117-7730117|C/T|missense_variant'] 128519 13922 VSGGVLSNLAL True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 65.392 2 -0.501478863256669 0.13998047553650908 0.9960087333072746 ['ENSG00000164933|ENST00000297578|SLC25A32'] 4873 18621 ALGALPALTF True PC9_epitope_Rep3 972.56441792004 972.56332993586 76.847 2 -0.5015634860923711 0.14001125119957641 0.9961766544801267 ['nc|ENSG00000177595|Q9HB75-3|PIDD1', 'nc|ENSG00000177595|Q9HB75-2|PIDD1', 'ENSG00000177595|ENST00000347755|PIDD1', 'ENST00000524486.5_1_11:803168-803522:-|nuORF'] 99645 12682 SLFWKLFML True PC9_epitope_Rep5 1183.64637372219 1183.6447349037899 53.787 3 -0.5016260104346556 0.14005625413633355 0.9962999064347697 ['ENST00000260818.10_1_3:132233460-132235298:+|nuORF'] 116387 13882 TWAQNAITC True PC9_epitope_Rep1 1006.4542158480599 1006.45367496793 58.237 1 -0.5016420648817062 0.14005625413633355 0.9963314392998215 ['ENST00000555208.1_1_14:77795315-77795561:+|nuORF', 'ENST00000553431.5_1_14:77787511-77795561:+|nuORF', 'nc|ENSG00000100577|O43708-2|GSTZ1', 'nc|ENSG00000100577|O43708-3|GSTZ1', 'ENST00000555093.1_1_14:77794152-77797535:+|nuORF', 'nc|ENSG00000100577|O43708|GSTZ1', 'ENSG00000100577|ENST00000216465|GSTZ1'] 63694 18654 LPPWSQVSL True PC9_epitope_Rep1 1025.5545815123298 1025.5534899358602 76.541 2 -0.501652909388257 0.14007048195761154 0.9963527123804381 ['ENST00000490691.1_1_3:4345308-4357963:+|nuORF'] 60764 8948 LKEMPPPP True H1975_Epitope_Rep3 907.4837250711898 907.48262993586 39.415 2 -0.5016833443499756 0.14009661835748793 0.9964122985461328 ['ENST00000397463.2_1_2:133403546-133403624:-|nuORF'] 82368 8829 PTTRDWTD True H1975_Epitope_Rep1 990.4406739588999 990.44012496793 38.883 1 -0.5016952874011245 0.14009661835748793 0.9964356336467133 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.S2410Lfs*12|1|0.26|ENSG00000197653|chr12:123867998-123867998|C/-|frameshift_variant'] 66320 15116 LSQLQALALP True H1975_Epitope_Rep2 1052.62299542532 1052.62188993586 63.298 2 -0.5017282551625998 0.14009661835748793 0.9964999086265275 ['ENSG00000104964|ENST00000327141|TLE5', 'nc|ENSG00000104964|Q08117-2|TLE5', 'ENST00000590067.5_1_19:3053819-3055997:-|nuORF', 'ENST00000592414.1_1_19:3053819-3054095:-|nuORF'] 30587 6752 GAKQILGA True NCI_RA007_Epitope_Rep3 756.4493881677998 756.44828993586 33.65 2 -0.5017629362407723 0.14012738853503184 0.9965673005434068 ['ENST00000368361.8_1_1:155240712-155243295:-|nuORF'] 126444 4217 VPLQEGKEA True PC9_epitope_Rep1 969.5131106231698 969.51200993586 21.115 2 -0.5017758705611536 0.14014161400258082 0.996592375135702 ['ENST00000493195.5_1_1:159902482-159902782:-|nuORF'] 134208 4551 WRPSRRWRRTW True NCI_RA007_Epitope_Rep4 1641.8865293728097 1641.88433987172 23.908 4 -0.5019106161719953 0.14020546925405727 0.9968516357608872 ['ENST00000376874.8_1_12:124017965-124018079:-|nuORF'] 38090 4928 HENNNGQAAF True NCI_RA007_Epitope_Rep1 1100.4635346618 1100.4624299358602 23.25 2 -0.5019298460448715 0.14021505376344087 0.9968883380485456 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 54855 6822 LAGDVAER True PC9_epitope_Rep5 829.4293809992099 829.42828993586 31.213 2 -0.5019569741845941 0.14021505376344087 0.9969399859319279 ['nc|ENSG00000132470|P16144-5|ITGB4'] 56353 22456 LDRLRKKRHLL True NCI_RA007_Epitope_Rep3 1446.9259345732999 1446.92428490379 97.605 3 -0.5019806532690473 0.14021505376344087 0.9969849428165024 ['ENSG00000178605|ENST00000326153|GTPBP6'] 15606 11793 EAVAYNFQI True PC9_epitope_Rep4 1053.51311062317 1053.51200993586 53.131 2 -0.502014859889642 0.14022927660419182 0.9970496806410839 ['ENST00000453163.6_1_6:170891974-170892115:-|nuORF'] 39254 18994 HLLVLKMIFM True H1975_Epitope_Rep2 1243.71849311663 1243.7168549037901 78.843 3 -0.5020768044536084 0.14025772087406746 0.9971662875055501 ['ENSG00000187510|ENST00000344636|PLEKHG7'] 84358 10946 QGAGSVLF True NCI_RA007_Epitope_Rep3 777.40210362221 777.40100993586 50.143 2 -0.5021104649376746 0.14025772087406746 0.9972293097988016 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 398 12275 AALGTMTSL True NCI_RA007_Epitope_Rep4 863.4422541820301 863.44170496793 54.212 1 -0.5021379559643729 0.14026730183935424 0.9972806011553589 ['ABCG1-MEI1|4|fusion', 'ABCG1-MEI1|5|fusion', 'ABCG1-MEI1|6|fusion', 'ABCG1-MEI1|3|fusion', 'ABCG1-MEI1|1|fusion', 'ABCG1-MEI1|2|fusion', 'nc|ENSG00000160179|P45844-3|ABCG1', 'nc|ENSG00000160179|P45844|ABCG1', 'nc|ENSG00000160179|P45844-2|ABCG1', 'nc|ENSG00000160179|P45844-7|ABCG1', 'nc|ENSG00000160179|P45844-6|ABCG1', 'nc|ENSG00000160179|P45844-5|ABCG1', 'ENSG00000160179|ENST00000398449|ABCG1', 'ENST00000496783.1_1_21:43708308-43714771:+|nuORF', 'nc|ENSG00000160179|P45844-8|ABCG1', 'ENST00000472587.5_1_21:43696971-43716499:+|nuORF'] 7699 6568 ASQEVQAHPP True NCI_RA007_Epitope_Rep5 1062.5094222250598 1062.50832993586 31.926 2 -0.5021536746828 0.14026730183935424 0.9973098552764356 ['TET3|p.G1454Afs*77|1|0.36|ENSG00000187605|chr2:74101148-74101148|G/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3', 'ENST00000475405.2_1_2:74274397-74300767:+|nuORF'] 8390 10225 ATPLNQVANP True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 44.319 2 -0.5021559203765331 0.14026730183935424 0.9973140303860819 ['nc|ENSG00000106682|Q15056-2|EIF4H', 'ENSG00000106682|ENST00000265753|EIF4H'] 58252 9265 LETAAPAPRPY True PC9_epitope_Rep3 1184.61897267404 1184.6178699358602 40.582 2 -0.5021768949155335 0.14029342198845499 0.9973529727744427 ['ENST00000454309.6_1_3:192126760-192126820:-|nuORF'] 23470 4517 EVYFFQCRRDF True H1975_Epitope_Rep3 1508.6870693171998 1508.6859699358602 22.495 2 -0.5021866158754105 0.14029342198845499 0.9973709888476217 ['DZIP3|p.L867F|2|0.15|ENSG00000198919|chr3:108674089-108674089|A/T|missense_variant'] 99676 10680 SLGCLHFLTR True PC9_epitope_Rep1 1145.60154878809 1145.59990490379 45.971 3 -0.5021880724959236 0.14029342198845499 0.9973736866660635 ['ENST00000257572.5_1_12:117298642-117298795:-|nuORF'] 57595 11859 LELKCNYF True H1975_Epitope_Rep3 1028.50010341132 1028.4990099358602 50.763 2 -0.5022133268920176 0.1403030002315504 0.9974203870608286 ['ENSG00000104237|ENST00000220676|RP1'] 15446 4134 EANSKTSCP True H1975_Epitope_Rep3 935.40184592203 935.40074993586 21.024 2 -0.5022270393085703 0.1403030002315504 0.9974456856879683 ['ENSG00000134594|ENST00000257017|RAB33A'] 105268 6005 STTKYLWLQIR True NCI_RA007_Epitope_Rep4 1407.78743498147 1407.78577490379 29.717 3 -0.5022544522663936 0.1403030002315504 0.9974961373692798 ['ENST00000423427.1_2_3:173114104-173322101:+|nuORF'] 140537 17509 YYLHSHRIL True PC9_epitope_Rep3 1200.64037682496 1200.63926993586 72.527 2 -0.5023739310693045 0.14036219300421732 0.9977140843840336 ['ENSG00000163482|ENST00000295709|STK36', 'STK36|p.E1226Pfs*43|1|0.22|ENSG00000163482|chr2:218699219-218699244|AGAGGAGCTGTTACAGTGCGAAGTAC/-|frameshift_variant', 'nc|ENSG00000163482|Q9NRP7-2|STK36', 'STK36|p.K295Rfs*8|1|0.33|ENSG00000163482|chr2:218679659-218679659|C/-|frameshift_variant'] 36662 20271 GVLQQQGGAP True PC9_epitope_Rep2 953.4930438849298 953.49194993586 83.394 2 -0.5023908753410359 0.14036219300421732 0.9977447342424067 ['ENSG00000165495|ENST00000298282|PKNOX2', 'nc|ENSG00000165495|Q96KN3-2|PKNOX2', 'ENST00000526955.1_1_11:125281302-125301285:+|nuORF'] 99623 12875 SLFRSVQEL True PC9_epitope_Rep4 1077.58185888933 1077.5807699358602 57.397 2 -0.5024184360713789 0.14036219300421732 0.997794448924212 ['IQCE|p.S298F|1|0.43|ENSG00000106012|chr7:2586276-2586276|C/T|missense_variant'] 66236 9567 LSPTVYSHQQL True PC9_epitope_Rep3 1271.6510010783102 1271.64934490379 41.751 3 -0.5024425482082074 0.14037640988324016 0.997837801251181 ['ENSG00000164329|ENST00000453514|TENT2', 'nc|ENSG00000164329|Q6PIY7-2|TENT2', 'ENST00000505571.5_1_5:78915459-78919324:+|nuORF'] 117087 20073 TYRFCDNVWTF True PC9_epitope_Rep5 1450.6339711151797 1450.63231490379 82.265 3 -0.502511502600367 0.1404237021846627 0.9979610420799264 ['ENSG00000140307|ENST00000396060|GTF2A2', 'ENST00000267869.8_1_15:59931333-59949661:-|nuORF'] 65483 10610 LSFLFQLSF True PC9_epitope_Rep1 1100.5906326678798 1100.5895299358601 45.704 2 -0.5025235026849713 0.14043559509831485 0.9979823775197454 ['nc|ENSG00000213780|Q92759-2|GTF2H4', 'ENST00000487746.1_1_6:30877224-30879547:+|nuORF', 'ENST00000477288.5_1_6:30876177-30879964:+|nuORF', 'ENSG00000213780|ENST00000259895|GTF2H4'] 62369 11605 LLRPDASVT True PC9_epitope_Rep2 970.54474510462 970.54364993586 49.964 2 -0.5025244845390411 0.14043559509831485 0.9979841217200414 ['ENST00000304271.10_2_11:68031188-68039337:-|nuORF'] 81820 13001 PSGGILSCV True H1975_Epitope_Rep3 831.41603943419 831.41549496793 55.243 1 -0.5026265534993078 0.14056324519191019 0.9981642121264018 ['nc|ENSG00000275395|Q9Y6R7|FCGBP', 'ENSG00000275395|ENST00000616721|FCGBP'] 100928 14218 SLSPCHHPAAP True H1975_Epitope_Rep2 1115.51821308695 1115.5171099358602 59.839 2 -0.5026410733843838 0.14056324519191019 0.9981896318373322 ['ENST00000374695.7_1_1:22175396-22175465:-|nuORF'] 27253 16216 FLWHNMKLPVP True H1975_Epitope_Rep2 1380.73764833808 1380.73654993586 67.584 2 -0.5027479817054435 0.1406105304934515 0.9983752460279232 ['ENSG00000183751|ENST00000568546|TBL3'] 113083 6668 TPYKQEINA True PC9_epitope_Rep5 1062.53457434374 1062.53346993586 30.621 2 -0.5027791512289457 0.14064127792568584 0.9984288444512883 ['ENSG00000138356|ENST00000374700|AOX1'] 39522 10332 HPEYAVSVLLR True H1975_Epitope_Rep1 1282.70337100434 1282.70173490379 44.689 3 -0.5028078382925726 0.14065316246382803 0.9984779653075794 ['CON__P02769'] 93228 10437 RRRRRRRPLWR True H1975_Epitope_Rep1 1663.0355936483397 1663.0339349037902 45.1 3 -0.5028216914355151 0.14065316246382803 0.9985016140724473 ['EIF2S2-ADRA1D|1|fusion', 'ENSG00000171873|ENST00000379453|ADRA1D'] 113071 15250 TPWPRGRLLTA True PC9_epitope_Rep1 1266.71968977482 1266.7180349037899 63.479 3 -0.5029077365136969 0.1406650462159168 0.9986474442404228 ['ENSG00000165898|ENST00000556816|ISCA2', 'nc|ENSG00000165898|Q86U28-2|ISCA2', 'ENST00000555139.1_1_14:74960477-74961199:+|nuORF'] 89155 5629 REHGIRLLEA True NCI_RA007_Epitope_Rep3 1192.66765420196 1192.66600490379 29.133 3 -0.5029717335365174 0.1406650462159168 0.9987547140425296 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant', 'ENSG00000261150|ENST00000615648|EPPK1'] 29181 11135 FVADGIFK True NCI_RA007_Epitope_Rep5 895.4803539429099 895.47924993586 49.466 2 -0.503081751485732 0.14069113756613758 0.9989367077909943 ['ENSG00000149273|ENST00000531188|RPS3', 'nc|ENSG00000149273|P23396-2|RPS3', 'ENST00000529173.5_1_11:75110591-75112804:+|nuORF'] 126747 9752 VPSEGVQI True PC9_epitope_Rep2 827.43888305375 827.43778993586 42.849 2 -0.5030887441884494 0.14069113756613758 0.9989481709658394 ['ENST00000589827.5_1_17:75138810-75139725:+|nuORF'] 49247 9421 KGSSGSAF True H1975_Epitope_Rep1 739.35006804935 739.3495149679301 41.15 1 -0.5031573420848011 0.14069113756613758 0.9990599559814697 ['ENSG00000205927|ENST00000382357|OLIG2'] 100790 16366 SLRRKYKSVFI True PC9_epitope_Rep5 1395.83505388023 1395.83341490379 67.95 3 -0.5031999386523618 0.1407053454803988 0.9991287558979872 ['L1MB7_dup7884|chr6:109271511-109272669:-|1.663382698896682|0.075209377654616|4.47|479.0|26|2|sense'] 13236 14376 DLTVFVYQQL True PC9_epitope_Rep5 1224.63903941228 1224.63739490379 60.297 3 -0.5033026721655793 0.14074563941473092 0.9992927270311696 ['nc|ENSG00000145734|A6H8Y1-8|BDP1'] 78930 16540 PFETFQVI True PC9_epitope_Rep5 979.5014833103099 979.50038993586 68.623 2 -0.5033142766584877 0.14074563941473092 0.9993110731425512 ['ENSG00000129744|ENST00000250693|ART1'] 54744 5333 LAEPM[Oxidation]TYKLM[Oxidation] True NCI_RA007_Epitope_Rep2 1227.58793320043 1227.5868299358601 25.364 2 -0.5033157836577581 0.14074563941473092 0.9993134529996898 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1'] 58198 7944 LESPKKTICDP True NCI_RA007_Epitope_Rep2 1229.6325741328499 1229.6314699358602 35.531 2 -0.5033195201828825 0.14074563941473092 0.999319351117744 ['ENSG00000129675|ENST00000250617|ARHGEF6'] 30366 7065 GAENPRPFSP True NCI_RA007_Epitope_Rep1 1070.5145076055 1070.5134099358602 31.476 2 -0.5033989524440207 0.14080944350758853 0.9994438504095381 ['ENSG00000171992|ENST00000307662|SYNPO'] 86187 13590 QPTEPQPVLI True PC9_epitope_Rep5 1120.6128246644398 1120.61172993586 57.297 2 -0.5034572092469942 0.14082364805660721 0.9995340774635962 ['ENSG00000065613|ENST00000369755|SLK', 'nc|ENSG00000065613|Q9H2G2-2|SLK'] 47947 6910 KAAQVTAG True NCI_RA007_Epitope_Rep4 744.4130026590799 744.4124549679301 33.198 1 -0.5034805496767113 0.14083785213596084 0.9995699674198208 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 64225 15889 LQKDKYRIRVW True PC9_epitope_Rep1 1503.86741663767 1503.86578490379 65.927 3 -0.5035495436818417 0.14085205574567278 0.9996751834482553 ['ENST00000524165.5_1_8:128806950-128808232:+|nuORF', 'ENST00000517790.1_1_8:128808079-128808232:+|nuORF'] 93360 6339 RRVEEQREQEK True H1975_Epitope_Rep1 1485.7648020439299 1485.76370993586 29.447 2 -0.5035658636125306 0.14086160153408714 0.999699879218517 ['ENSG00000158195|ENST00000618852|WASF2'] 23340 8483 EVTFSVDLTV True H1975_Epitope_Rep2 1108.5652057656798 1108.5641099358602 37.582 2 -0.5036174314741414 0.14086160153408714 0.9997774264726947 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'OBSCN|p.H4054Tfs*31|1|0.21|ENSG00000154358|chr1:228307133-228307133|C/-|frameshift_variant', 'OBSCN|p.R2782Lfs*22|1|0.23|ENSG00000154358|chr1:228282079-228282080|-/T|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 78990 14616 PFLGAPAAT True PC9_epitope_Rep1 843.44905381463 843.44850496793 61.043 1 -0.5036326091870197 0.14086160153408714 0.9998001091334578 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 93162 17796 RRRRRENPV True H1975_Epitope_Rep2 1237.72281809265 1237.7217299358601 73.773 2 -0.5037077110944612 0.14092306675042152 0.9999113931852985 ['ENST00000305123.5_1_2:227663922-227664009:-|nuORF'] 115482 4417 TVGAAGWK True NCI_RA007_Epitope_Rep4 788.4180880395201 788.41698993586 23.352 2 -0.50370863021364 0.14092306675042152 0.9999127452384629 ['ENSG00000128951|ENST00000331200|DUT'] 108628 17108 TEKFC[Carbamidomethyl]FYL True PC9_epitope_Rep1 1106.5106683744498 1106.50956993586 70.632 2 -0.5037720808108951 0.14093027868689875 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 94175 16181 RWLGRWRRKRR True H1975_Epitope_Rep1 1624.9763474367198 1624.9752499358601 67.586 2 -0.5037953597835827 0.14093027868689875 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2'] 23702 12192 EYIKFLRSI True NCI_RA007_Epitope_Rep4 1167.6651945904698 1167.66355490379 53.891 3 -0.5037985383085511 0.14093027868689875 1.0 ['ENSG00000196591|ENST00000519065|HDAC2', 'nc|ENSG00000196591|Q92769-3|HDAC2', 'ENST00000521233.1_1_6:114279792-114292096:-|nuORF'] 38925 14747 HINRWRIA True PC9_epitope_Rep5 1064.59918071932 1064.5980899358601 61.723 2 -0.5038682457869175 0.14093027868689875 1.0 ['ENST00000394111.6_1_2:73143891-73161080:+|nuORF'] 127738 26285 VRKERKRHKT True NCI_RA007_Epitope_Rep1 1336.81638412432 1336.8152899358602 108.77 2 -0.5039277588491731 0.14097520661157026 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 106458 11365 SVVEDMILK True NCI_RA007_Epitope_Rep3 1032.5525329069999 1032.5514299358601 51.822 2 -0.5039328553019443 0.14097520661157026 1.0 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000472593.1_1_3:183521690-183528368:+|nuORF', 'ENST00000481343.1_1_3:183525829-183527073:+|nuORF'] 88178 19916 QWTSRKRK True PC9_epitope_Rep6 1088.6203100867199 1088.61920993586 89.263 2 -0.5040428743416903 0.14101780077020973 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 66321 15312 LSQLQELQL True PC9_epitope_Rep5 1070.5971746003 1070.5960699358602 63.908 2 -0.5040437089764574 0.14101780077020973 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 16199 12657 EEFGGLVSA True NCI_RA007_Epitope_Rep4 907.4287122928698 907.42816496793 55.715 1 -0.5040793738820336 0.14101780077020973 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 116473 13751 TYARYRYP True PC9_epitope_Rep1 1088.5403284305198 1088.53922993586 57.737 2 -0.5041320649992247 0.1410319978844374 1.0 ['nc|ENSG00000135454|Q00973-2|B4GALNT1', 'ENSG00000135454|ENST00000341156|B4GALNT1', 'ENST00000553142.5_1_12:58020529-58021701:-|nuORF'] 125374 20932 VLSSQLLIL True PC9_epitope_Rep5 984.6219327961599 984.62082993586 85.572 2 -0.5042172653710635 0.14107924964878935 1.0 ['ENST00000254508.6_1_3:13357788-13358088:-|nuORF'] 134214 5206 WRQSTWNGI True NCI_RA007_Epitope_Rep4 1146.55704112382 1146.55540490379 26.56 3 -0.5042283617638758 0.141091113424893 1.0 ['ENST00000468328.5_1_1:204951018-204956638:+|nuORF'] 10174 16489 CCDCQDTTDEC True NCI_RA007_Epitope_Rep2 1234.3246604240999 1234.32301490379 68.866 3 -0.5042557651764523 0.141091113424893 1.0 ['nc|ENSG00000099139|Q92824|PCSK5', 'ENSG00000099139|ENST00000674117|PCSK5'] 115284 18425 TVDNLGILYI True PC9_epitope_Rep6 1119.6175756917098 1119.61646993586 83.517 2 -0.5042709186538369 0.14110530838897337 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 56997 9555 LEEEEEEDP True PC9_epitope_Rep2 1117.4298940613298 1117.42878993586 42.099 2 -0.5043158379188589 0.14111950288386851 1.0 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 4355 12242 AIPGGPKFEPL True PC9_epitope_Rep2 1124.62299542532 1124.6213549037902 52.399 3 -0.5043473596183103 0.14112903225806453 1.0 ['ENSG00000174231|ENST00000304992|PRPF8'] 58835 22981 LFRLLLRFLRL True PC9_epitope_Rep6 1458.9551094432597 1458.95347490379 101.49 3 -0.5043558767512584 0.14112903225806453 1.0 ['CYP4F22|p.R407Pfs*36|2|0.16|ENSG00000171954|chr19:15548185-15548186|TC/-|frameshift_variant', 'ENSG00000171954|ENST00000269703|CYP4F22'] 9863 11274 AYLVHVPEN True PC9_epitope_Rep5 1040.52909504048 1040.5279899358602 48.358 2 -0.504389542138796 0.14112903225806453 1.0 ['nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7', 'ENSG00000254122|ENST00000398594|PCDHGB7'] 127580 21756 VQWPATQQGML True PC9_epitope_Rep5 1257.6175927750498 1257.61648993586 88.713 2 -0.5044478495027087 0.14114089301649205 1.0 ['nc|ENSG00000072071|O94910|ADGRL1', 'ENSG00000072071|ENST00000361434|ADGRL1', 'ENST00000589616.1_1_19:14270562-14272319:-|nuORF'] 43808 21497 IKKRRRWWFRS True PC9_epitope_Rep4 1617.9480670002097 1617.9469699358601 90.876 2 -0.5044605323583474 0.14114089301649205 1.0 ['ENST00000229634.13_1_6:126136448-126199430:+|nuORF'] 4219 9418 AIDYTQLGL True PC9_epitope_Rep2 992.51786165044 992.51676993586 41.566 2 -0.5044839646801592 0.14115508551598777 1.0 ['nc|ENSG00000188747|Q86UR1-2|NOXA1', 'ENSG00000188747|ENST00000683555|NOXA1', 'nc|ENSG00000188747|Q86UR1-3|NOXA1'] 134648 9253 WWHRRTHFWRT True H1975_Epitope_Rep1 1667.8334311707897 1667.83177490379 40.503 3 -0.5045143741812647 0.14117413790254624 1.0 ['ENST00000322893.11_1_14:63483627-63512140:-|nuORF'] 11186 8739 DEIYEGEYQ True H1975_Epitope_Rep2 1144.4560492395199 1144.4549499358602 38.576 2 -0.5045280306097641 0.14117413790254624 1.0 ['SV2A|p.E490Sfs*3|1|0.38|ENSG00000159164|chr1:149908118-149908118|C/-|frameshift_variant', 'nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A', 'ENSG00000122012|ENST00000502798|SV2C', 'ENSG00000185518|ENST00000394232|SV2B'] 27234 8062 FLVKGAQG True H1975_Epitope_Rep3 818.4650382319398 818.46394993586 35.984 2 -0.5045442923932657 0.14117413790254624 1.0 ['ALKBH2|p.S56Afs*34|1|0.22|ENSG00000189046|chr12:109092622-109092622|A/-|frameshift_variant', 'ENST00000536720.1_1_12:109530171-109530633:-|nuORF', 'nc|ENSG00000189046|Q6NS38-2|ALKBH2', 'ENSG00000189046|ENST00000429722|ALKBH2'] 35750 7628 GTTNKMKSP True NCI_RA007_Epitope_Rep4 962.4855159763399 962.48440993586 35.994 2 -0.5045503260015337 0.14117413790254624 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 61388 14690 LLELVQTPRLP True H1975_Epitope_Rep1 1277.77072228817 1277.7696299358602 61.722 2 -0.5045814627066973 0.14117413790254624 1.0 ['ENST00000366663.9_1_1:230974343-230974889:-|nuORF'] 2076 2748 AELHPRWMSDH True H1975_Epitope_Rep3 1377.62480341381 1377.62314490379 14.653 3 -0.5045968726261028 0.14117413790254624 1.0 ['CECR2|p.E1074Gfs*15|1|0.14|ENSG00000099954|chr22:17548448-17548461|AGAACGGAGTCATT/-|frameshift_variant', 'ENSG00000099954|ENST00000262608|CECR2', 'nc|ENSG00000099954|Q9BXF3|CECR2'] 56127 15169 LDLWEFFCRKK True H1975_Epitope_Rep1 1483.7645913619097 1483.7634899358602 63.608 2 -0.504612493446685 0.1411859954067049 1.0 ['nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-2|PARP11', 'ENST00000476985.5_1_12:3921210-3931106:-|nuORF'] 117108 6390 TYSGQWMYERV True H1975_Epitope_Rep1 1418.62888573474 1418.6277899358602 29.639 2 -0.5046225988954653 0.1411859954067049 1.0 ['ENSG00000226887|ENST00000443173|ERVMER34-1'] 41746 9895 IDPDRVMRY True H1975_Epitope_Rep3 1163.57572796307 1163.57462993586 43.093 2 -0.504633893149351 0.1412167074218492 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1', 'DSCAML1|p.A1642Rfs*2|1|0.38|ENSG00000177103|chr11:117435773-117435777|GAGCA/-|frameshift_variant'] 135415 16713 YDRYLKLW True PC9_epitope_Rep1 1155.6076797143498 1155.60604490379 69.114 3 -0.5047413059097137 0.14124275116889984 1.0 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 71227 12298 MFVFKERWFWR True NCI_RA007_Epitope_Rep5 1630.8231092975398 1630.82200993586 53.955 2 -0.5047802984939098 0.14124275116889984 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 93211 19489 RRRRRPLWRVY True NCI_RA007_Epitope_Rep1 1612.96511404668 1612.96345490379 79.967 3 -0.5047869562210949 0.14124275116889984 1.0 ['EIF2S2-ADRA1D|1|fusion', 'ENSG00000171873|ENST00000379453|ADRA1D'] 19146 9553 ELIRWEEGK True H1975_Epitope_Rep3 1158.6033226099 1158.6022299358601 41.754 2 -0.5048512393063269 0.14127112623701035 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 16115 12560 EEEEDEEAL True PC9_epitope_Rep2 1091.41424399719 1091.41314993586 53.619 2 -0.5048632171268725 0.14127112623701035 1.0 ['ENSG00000214753|ENST00000301785|HNRNPUL2'] 22010 8310 ESPLSVSSP True H1975_Epitope_Rep2 901.43927697657 901.43816993586 36.916 2 -0.5049383636899184 0.14130183380142078 1.0 ['ENSG00000145725|ENST00000358359|PPIP5K2', 'nc|ENSG00000145725|O43314-2|PPIP5K2'] 66271 10539 LSQEKTTL True PC9_epitope_Rep1 918.5022115863 918.50110993586 45.429 2 -0.5049717165343129 0.1413302055111346 1.0 ['nc|ENSG00000135241|Q9NP80-3|PNPLA8', 'nc|ENSG00000135241|Q9NP80-2|PNPLA8', 'ENSG00000135241|ENST00000257694|PNPLA8'] 9054 18002 AVIRPIIAT True PC9_epitope_Rep5 952.6069514383599 952.60584993586 74.262 2 -0.5049827806511794 0.1413302055111346 1.0 ['RBM42|p.P81A|1|0.08|ENSG00000126254|chr19:35629632-35629632|C/G|missense_variant'] 67991 11730 LTLSQSHSL True PC9_epitope_Rep3 984.5240096600401 984.52290993586 50.139 2 -0.5050206797833352 0.14136091057770142 1.0 ['ENST00000485832.1_1_7:128446807-128447827:+|nuORF'] 33664 12627 GLPHFSSGI True PC9_epitope_Rep2 913.46576650793 913.46466993586 53.879 2 -0.5050849116338797 0.14137509498794065 1.0 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 392 14357 AALEQLREKLE True NCI_RA007_Epitope_Rep2 1298.7194149913 1298.7183099358601 60.512 2 -0.5051637734148493 0.14138460776054315 1.0 ['ENSG00000116017|ENST00000263620|ARID3A'] 118476 8973 VDRMGKSLP True H1975_Epitope_Rep3 1001.5328005219299 1001.53170993586 39.51 2 -0.5051705974507941 0.14138460776054315 1.0 ['ENST00000549628.1_1_12:53492723-53495948:+|nuORF', 'ENSG00000167779|ENST00000301464|IGFBP6'] 82947 25356 PWRFRLLCL True PC9_epitope_Rep2 1202.6746541587 1202.6735499358601 103.21 2 -0.50521452676736 0.14138460776054315 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 65308 11405 LSEKQVSQL True PC9_epitope_Rep3 1030.56587447202 1030.56476993586 48.872 2 -0.5052806963931085 0.1414129734551281 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant', 'PLXNA3|p.S956Lfs*51|1|0.53|ENSG00000130827|chrX:154466439-154466440|-/T|frameshift_variant'] 130858 17072 VVGGIYGV True PC9_epitope_Rep2 762.42759009406 762.4270449679301 70.919 1 -0.5053075104858946 0.1414129734551281 1.0 ['ENSG00000167658|ENST00000309311|EEF2'] 42040 9253 IEEALQAGLAP True H1975_Epitope_Rep1 1110.5920892198599 1110.59098993586 40.503 2 -0.505462263046867 0.14144133727556532 1.0 ['ENSG00000165943|ENST00000298894|MOAP1'] 69987 24343 LYFDVEPFVF True PC9_epitope_Rep2 1274.62232671898 1274.6212299358601 99.186 2 -0.5054736560702322 0.14144133727556532 1.0 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF', 'ENSG00000103510|ENST00000219797|KAT8', 'nc|ENSG00000103510|Q9H7Z6-2|KAT8'] 37360 2699 GVWYFNSPYPK True NCI_RA007_Epitope_Rep2 1356.65027280232 1356.64861490379 14.725 3 -0.5055097305111677 0.14145551848303656 1.0 ['MAG|p.F444Lfs*8|1|0.13|ENSG00000105695|chr19:35309972-35309972|T/-|frameshift_variant', 'nc|ENSG00000105695|P20916-2|MAG', 'nc|ENSG00000105695|P20916-3|MAG', 'ENSG00000105695|ENST00000392213|MAG'] 66690 8619 LSTERCLSV True H1975_Epitope_Rep2 1006.51173072418 1006.51062993586 38.109 2 -0.5055585719168418 0.14146969922204053 1.0 ['MRGPRX1|p.V116L|1|0.44|ENSG00000170255|chr11:18934439-18934439|C/G|missense_variant'] 58061 8173 LERMDESV True PC9_epitope_Rep3 977.4487961144499 977.44768993586 36.415 2 -0.505593037575569 0.14148154265422414 1.0 ['ENSG00000089234|ENST00000419234|BRAP', 'nc|ENSG00000089234|Q7Z569-2|BRAP'] 57512 14215 LEKQEKLSV True PC9_epitope_Rep3 1072.6128246644398 1072.61172993586 59.765 2 -0.505620211558734 0.14148154265422414 1.0 ['ENSG00000141519|ENST00000397545|CCDC40', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'ENST00000572253.5_1_17:78061710-78071334:+|nuORF'] 36934 13350 GVREMREAFTV True PC9_epitope_Rep1 1293.6499555324897 1293.64831490379 56.21 3 -0.505709676731779 0.14150990139891323 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 47212 14661 IYCEPVRDLL True PC9_epitope_Rep2 1219.6270948295899 1219.6254449037901 61.66 3 -0.5057438049534669 0.14150990139891323 1.0 ['KIF1A|p.R153P|1|0.61|ENSG00000130294|chr2:240786485-240786485|C/G|missense_variant'] 68526 8052 LTVTNYRLYFK True NCI_RA007_Epitope_Rep1 1416.7765359446 1416.77488490379 35.317 3 -0.5057630462897919 0.14152408006870582 1.0 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 137843 7389 YPHKRTNFI True NCI_RA007_Epitope_Rep5 1174.6247267608198 1174.62307490379 35.1 3 -0.5058227258997611 0.14157128936894087 1.0 ['ENSG00000203963|ENST00000684719|C1orf141'] 119169 19122 VEKEWRRF True PC9_epitope_Rep1 1148.6090766966797 1148.6079699358602 78.343 2 -0.5058844260597709 0.14159730479587793 1.0 ['ENSG00000173013|ENST00000310085|CCDC96'] 67034 11364 LTAPAVEAP True H1975_Epitope_Rep2 867.4701831820299 867.46963496793 48.76 1 -0.5058849098654654 0.14159730479587793 1.0 ['ENSG00000160972|ENST00000435887|PPP1R16A', 'ENST00000526183.5_1_8:145725999-145727283:+|nuORF'] 16990 9861 EGIDKGQLP True NCI_RA007_Epitope_Rep4 955.4974605590298 955.49636993586 44.778 2 -0.5059046887035124 0.14159730479587793 1.0 ['ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4'] 59096 23555 LGEEAVLLL True PC9_epitope_Rep2 955.5589981864299 955.55790993586 96.079 2 -0.5059893795195678 0.14160914225319549 1.0 ['ENSG00000229549|ENST00000287721|TSPY8', 'nc|ENSG00000258992|Q01534-2|TSPY1', 'ENSG00000258992|ENST00000451548|TSPY1', 'ENSG00000236424|ENST00000428845|TSPY10', 'ENSG00000228927|ENST00000457222|TSPY3', 'ENSG00000168757|ENST00000320701|TSPY2', 'ENSG00000238074|ENST00000440215|TSPY9', 'ENSG00000233803|ENST00000426950|TSPY4'] 123283 16111 VHSEIPAFLL True NCI_RA007_Epitope_Rep1 1124.62299542532 1124.62188993586 66.773 2 -0.5060354489792259 0.14160914225319549 1.0 ['nc|ENSG00000100150|O75140-8|DEPDC5', 'nc|ENSG00000100150|O75140-5|DEPDC5', 'nc|ENSG00000100150|O75140-1|DEPDC5', 'nc|ENSG00000100150|O75140-4|DEPDC5', 'nc|ENSG00000100150|O75140-9|DEPDC5', 'ENSG00000100150|ENST00000651528|DEPDC5'] 102461 10612 SPYHYRLDW True H1975_Epitope_Rep1 1235.5723568347898 1235.5712499358601 45.773 2 -0.5060686244895722 0.14162331764511601 1.0 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 65553 13394 LSGEEDIYPLK True H1975_Epitope_Rep1 1262.6394333350997 1262.6383299358602 56.63 2 -0.5061348428717356 0.14163749256886188 1.0 ['ENST00000465223.1_1_1:160313254-160314563:+|nuORF'] 134793 14661 WYKSKFANL True PC9_epitope_Rep1 1155.6076797143498 1155.60604490379 61.215 3 -0.5062649644805389 0.14170120712716944 1.0 ['ENSG00000148798|ENST00000369849|INA'] 33251 7849 GLAGARQLQLQ True NCI_RA007_Epitope_Rep3 1153.65675516509 1153.65564993586 37.995 2 -0.506355251251068 0.1417107001321004 1.0 ['ENSG00000187954|ENST00000530374|ZFTRAF1'] 99868 10581 SLHGTLQRRY True H1975_Epitope_Rep3 1229.66290317469 1229.6618099358602 45.77 2 -0.5063619644727264 0.1417107001321004 1.0 ['ENST00000485594.1_1_1:161089027-161090552:+|nuORF'] 9186 16123 AVPEEGLAQV True PC9_epitope_Rep1 1011.5236753068697 1011.52256993586 66.833 2 -0.5063743457409111 0.1417107001321004 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant', 'nc|ENSG00000182095|O15417-4|TNRC18'] 15359 10179 EALGAAKKL True H1975_Epitope_Rep3 899.54401682863 899.54290993586 44.198 2 -0.5064687673504968 0.14173904428519535 1.0 ['ENSG00000163286|ENST00000295453|ALPG', 'ENSG00000163283|ENST00000392027|ALPP'] 87874 15598 QVLGLPWS True PC9_epitope_Rep4 898.49125297978 898.49070496793 67.917 1 -0.5064763072721135 0.14173904428519535 1.0 ['ENST00000421367.6_1_10:101910840-101911047:-|nuORF'] 42108 13708 IEELTRPNLSK True H1975_Epitope_Rep3 1298.7194149913 1298.7183099358601 58.024 2 -0.5065629860890369 0.1418192625860674 1.0 ['UBA3|p.R424L|1|0.34|ENSG00000144744|chr3:69055883-69055883|C/A|missense_variant'] 23050 15980 EVKSWSLGV True PC9_epitope_Rep3 1003.5338460677499 1003.53274993586 66.613 2 -0.506680357319523 0.14184994386103955 1.0 ['RFPL4B|p.F221Lfs*39|1|0.15|ENSG00000251258|chr6:112350366-112350366|T/-|frameshift_variant', 'ENSG00000251258|ENST00000441065|RFPL4B'] 112729 11509 TPINQNVSL True PC9_epitope_Rep5 984.5240096600401 984.52290993586 49.266 2 -0.5067492352688611 0.1419443251989565 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 117394 11499 VADFPEKDCPV True H1975_Epitope_Rep1 1218.55907483942 1218.55796993586 49.215 2 -0.5067511344023747 0.1419443251989565 1.0 ['ENST00000440760.5_1_2:27594325-27599583:+|nuORF', 'nc|ENSG00000115234|Q15036-2|SNX17', 'ENSG00000115234|ENST00000233575|SNX17'] 61062 19524 LLATWHSAL True PC9_epitope_Rep2 1010.5549158655 1010.55380993586 80.483 2 -0.5067628550593414 0.141958492248254 1.0 ['ENST00000483495.5_1_20:34214165-34218616:-|nuORF'] 60596 15341 LISGTNWQSI True PC9_epitope_Rep5 1117.57677350889 1117.57566993586 64.019 2 -0.5069019069887383 0.14200567956676793 1.0 ['ENST00000304552.4_1_3:45984986-45987984:+|nuORF'] 21187 23171 ERERFYIYRKP True PC9_epitope_Rep2 1555.8259457485096 1555.8248499358601 94.613 2 -0.5069510927430615 0.14201984513530025 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 80939 11652 PMQPVTAP True PC9_epitope_Rep5 839.4211248146299 839.4205749679301 49.815 1 -0.5070342504586978 0.14206468441993694 1.0 ['nc|ENSG00000182944|Q01844-3|EWSR1', 'ENSG00000182944|ENST00000397938|EWSR1', 'nc|ENSG00000182944|Q01844-5|EWSR1', 'ENST00000479135.5_1_22:29673993-29684776:+|nuORF', 'ENST00000483415.5_1_22:29664325-29684776:+|nuORF', 'nc|ENSG00000182944|Q01844-4|EWSR1', 'nc|ENSG00000182944|Q01844-2|EWSR1'] 109130 5271 TFKEGMDELR True NCI_RA007_Epitope_Rep5 1224.5808729131597 1224.57922490379 26.971 3 -0.5070347802273045 0.14206468441993694 1.0 ['ENSG00000165813|ENST00000369287|CCDC186'] 133148 13068 WDANDMVI True PC9_epitope_Rep2 962.41676771018 962.41566993586 55.544 2 -0.5070685490807801 0.14207884831275178 1.0 ['nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 98651 13212 SIPPGPLSA True PC9_epitope_Rep1 837.45961849833 837.45852993586 55.683 2 -0.5070718853432388 0.14209066596229405 1.0 ['ENST00000506216.5_1_4:5858033-5890143:-|nuORF'] 7061 4240 AQVLHVPS True NCI_RA007_Epitope_Rep5 849.47085188837 849.46974993586 22.857 2 -0.5070725514135973 0.14209066596229405 1.0 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 68431 20774 LTTLELLEV True PC9_epitope_Rep6 1029.5957776179698 1029.59527496793 92.67 1 -0.5070869348107163 0.14210013701569904 1.0 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 396 16498 AALGPIAKAL True PC9_epitope_Rep2 923.5804023373499 923.57930993586 68.701 2 -0.5071061519902089 0.14210013701569904 1.0 ['ENSG00000189181|ENST00000342623|OR14I1'] 11997 5309 DHYVSRVR True NCI_RA007_Epitope_Rep2 1030.5308263759798 1030.5297299358601 25.274 2 -0.5071418702672063 0.14210013701569904 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 92969 4663 RRQEWERQYRK True NCI_RA007_Epitope_Rep2 1633.8549544610098 1633.85329490379 22.763 3 -0.5071994492332914 0.14216382184951631 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 59685 22273 LGTLLGNLL True PC9_epitope_Rep4 912.56441792004 912.56332993586 93.912 2 -0.5073094360066227 0.14219448983971344 1.0 ['ENSG00000279514|ENST00000623907|OR4C16'] 39042 5394 HKRPQLSP True PC9_epitope_Rep6 961.5457481641299 961.54464993586 28.632 2 -0.507413611990435 0.1422228091315759 1.0 ['ENST00000465160.2_1_9:140286885-140287641:-|nuORF'] 22661 3731 ETSEQEQKHK True NCI_RA007_Epitope_Rep2 1242.5840437173 1242.5824049037901 19.155 3 -0.5074185615539307 0.1422228091315759 1.0 ['nc|ENSG00000137492|O43422-2|THAP12', 'ENSG00000137492|ENST00000260045|THAP12', 'ENST00000489193.1_1_3:86062314-86062485:+|nuORF', 'ENST00000520248.1_1_8:79672597-79674655:-|nuORF'] 45452 14714 ISEELQDAL True PC9_epitope_Rep4 1016.5026055091199 1016.50150993586 64.531 2 -0.507513872407092 0.14226528456358115 1.0 ['ENSG00000033030|ENST00000633063|ZCCHC8', 'nc|ENSG00000033030|Q6NZY4-2|ZCCHC8'] 62668 5687 LLWCPQVP True NCI_RA007_Epitope_Rep2 954.4997094884999 954.49860993586 26.734 2 -0.5075212807355556 0.14226528456358115 1.0 ['ENST00000322313.8_1_2:128458821-128459556:-|nuORF'] 105833 22888 SVIQIHLLL True PC9_epitope_Rep5 1034.64881625034 1034.6477099358601 93.038 2 -0.5075537657776553 0.14226528456358115 1.0 ['ENSG00000139055|ENST00000266397|ERP27'] 7018 14840 AQRPRRLPAGP True PC9_epitope_Rep1 1217.7105220734497 1217.70942993586 61.902 2 -0.5078298094125953 0.14236197078484775 1.0 ['nc|ENSG00000125861|Q9GZZ7|GFRA4'] 40793 11637 HVGSGDLFSGM-[Oxidation] True PC9_epitope_Rep2 1121.48115925233 1121.48006993586 50.088 2 -0.5079286828618718 0.14239263196117916 1.0 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 92883 20257 RRMRRRNRHQR True NCI_RA007_Epitope_Rep1 1620.9192435667599 1620.91759490379 83.001 3 -0.5080695423373308 0.14243979731625597 1.0 ['ENST00000541683.1_1_11:61582434-61582803:-|nuORF'] 14036 10430 DSDDGPSLP True H1975_Epitope_Rep3 901.36650595913 901.3659549679301 45.178 1 -0.5080731117572643 0.14244454713493532 1.0 ['ENSG00000157916|ENST00000605895|RER1'] 35358 15899 GTAGLLEQWLK True NCI_RA007_Epitope_Rep5 1214.66592286646 1214.66482993586 67.883 2 -0.5080871789432652 0.14244454713493532 1.0 ['HMCES|p.E162Kfs*13|1|0.24|ENSG00000183624|chr3:129298384-129298386|GAG/AA|frameshift_variant', 'ENSG00000183624|ENST00000383463|HMCES'] 115615 16942 TVIQRAYRRYR True NCI_RA007_Epitope_Rep1 1480.8375134917198 1480.83640993586 70.029 2 -0.508098589052356 0.14244454713493532 1.0 ['nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 56973 9592 LEEANLQK True PC9_epitope_Rep2 943.49746055903 943.49636993586 42.24 2 -0.508149701832517 0.14244454713493532 1.0 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129873642-129918394:-|nuORF'] 26521 7073 FITVDGRE True H1975_Epitope_Rep3 935.4712458111899 935.47014993586 32.173 2 -0.5081752912281408 0.14244454713493532 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'ENST00000492048.5_1_18:6942080-6955548:-|nuORF'] 82264 21502 PTLSYVPDL True PC9_epitope_Rep5 1003.5226126777098 1003.52150993586 87.743 2 -0.508200621584982 0.14245869984981763 1.0 ['ENST00000303277.6_1_4:1718369-1718675:-|nuORF'] 13374 7476 DNEKKWDLIC True NCI_RA007_Epitope_Rep2 1262.5965229772999 1262.59542993586 33.708 2 -0.5082848443208019 0.1424728520975674 1.0 ['nc|ENSG00000161791|Q8IVF7-2|FMNL3', 'ENSG00000161791|ENST00000335154|FMNL3', 'nc|ENSG00000161791|Q8IVF7|FMNL3', 'ENST00000550970.1_1_12:50055747-50062331:-|nuORF'] 64782 9863 LRSWWPRWWWA True NCI_RA007_Epitope_Rep3 1628.8153214951599 1628.81422993586 45.869 2 -0.5083084946759435 0.14248465245230707 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 94857 19704 RYMRIYRRYIY True PC9_epitope_Rep3 1651.8769357755498 1651.87582993586 81.02 2 -0.5083551761653118 0.14248465245230707 1.0 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 69895 11484 LYCQTLSELPW True NCI_RA007_Epitope_Rep4 1351.64822419699 1351.6471299358602 51.107 2 -0.5083702020772631 0.14251530603825271 1.0 ['ENST00000588753.1_1_21:47660768-47664506:+|nuORF'] 117931 5696 VAQSEAEK True NCI_RA007_Epitope_Rep2 860.4239612655998 860.42286993586 26.771 2 -0.5084149240804339 0.14252945641770356 1.0 ['ENSG00000065548|ENST00000337859|ZC3H15', 'ENST00000481101.5_1_2:187351750-187368784:+|nuORF', 'ENST00000468120.5_1_2:187351750-187368784:+|nuORF'] 42216 14306 IEGRVVNAL True PC9_epitope_Rep6 969.5607295219299 969.55962993586 66.926 2 -0.508455262384351 0.14256955215999473 1.0 ['ENST00000466410.5_1_2:128398362-128421974:-|nuORF', 'ENST00000484252.5_1_2:128398362-128399806:-|nuORF', 'nc|ENSG00000072163|Q7Z4I7-3|LIMS2', 'ENSG00000072163|ENST00000355119|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-5|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-2|LIMS2', 'nc|ENSG00000072163|Q7Z4I7-4|LIMS2'] 100976 7389 SLSTFCSLKP True H1975_Epitope_Rep3 1081.5477818797299 1081.54668993586 33.4 2 -0.508455357491631 0.14256955215999473 1.0 ['ENST00000524964.1_1_11:126164366-126174190:-|nuORF'] 83132 5797 PYREDLKNMVK True H1975_Epitope_Rep1 1391.7231204727498 1391.72146490379 27.37 3 -0.5085302913504222 0.14256955215999473 1.0 ['LRRC7|p.P611R|1|0.21|ENSG00000033122|chr1:70028208-70028208|C/G|missense_variant'] 101166 13893 SLVRAILGT True PC9_epitope_Rep4 928.5705659296399 928.56946993586 61.341 2 -0.5085537779865276 0.14256955215999473 1.0 ['nc|ENSG00000141391|Q96N28-2|PRELID3A', 'ENSG00000141391|ENST00000440960|PRELID3A'] 101698 9841 SPGFELMEAPG True H1975_Epitope_Rep2 1133.5063109905698 1133.5052099358602 42.84 2 -0.5085766338776839 0.14258370047687408 1.0 ['nc|ENSG00000198788|Q02817|MUC2'] 16167 11823 EEERYFRHYR True H1975_Epitope_Rep3 1483.6956598549498 1483.69456993586 50.622 2 -0.5086027566306269 0.14261199570992492 1.0 ['nc|ENSG00000130770|Q9UII2-2|ATP5IF1'] 20944 5416 EQWERSRTVWS True NCI_RA007_Epitope_Rep2 1462.69532550178 1462.69366490379 25.687 3 -0.5086445808953043 0.14261199570992492 1.0 ['ENST00000405292.2_1_17:20674607-20674706:-|nuORF'] 125890 11738 VNSYFDSFL True NCI_RA007_Epitope_Rep5 1090.49712620586 1090.4960299358602 51.807 2 -0.508666312304733 0.14264264264264265 1.0 ['nc|ENSG00000138308|Q9BX93-2|PLA2G12B', 'ENSG00000138308|ENST00000373032|PLA2G12B'] 57305 17491 LEGKRFLEL True PC9_epitope_Rep2 1103.6338944621898 1103.63278993586 72.535 2 -0.5087642871851475 0.14268978830828122 1.0 ['ENST00000473217.5_1_17:27901722-27902547:-|nuORF', 'GIT1|p.S641Hfs*28|2|0.2|ENSG00000108262|chr17:29575376-29575377|TG/-|frameshift_variant', 'ENSG00000108262|ENST00000225394|GIT1', 'nc|ENSG00000108262|Q9Y2X7-3|GIT1'] 9199 21526 AVPEVAVYL True PC9_epitope_Rep1 959.5327834385898 959.53168993586 87.631 2 -0.5088048944441455 0.14270393347412882 1.0 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 89699 5616 REYHKWRTYFK True NCI_RA007_Epitope_Rep5 1612.8262801016797 1612.8246449037902 28.29 3 -0.5088331608692694 0.1427345773729974 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-3|MLXIP'] 113030 11487 TPTVQPGL True PC9_epitope_Rep1 811.4439684341899 811.44286993586 49.065 2 -0.5088733233756929 0.14276522026068306 1.0 ['ENST00000455127.6_2_17:79780443-79780851:-|nuORF'] 78623 5207 PDTGPWGEVK True NCI_RA007_Epitope_Rep2 1084.5189242795998 1084.5178299358602 24.873 2 -0.5088958028978106 0.14279350623638884 1.0 ['ENSG00000148600|ENST00000623527|CDHR1', 'nc|ENSG00000148600|Q96JP9-2|CDHR1'] 3977 14596 AHETLHQSL True PC9_epitope_Rep5 1034.5145076055 1034.5134099358602 61.145 2 -0.5089851035173392 0.14279350623638884 1.0 ['CDC25A-SPINK8|1|fusion', 'CDC25A-SPINK8|2|fusion', 'nc|ENSG00000164045|P30304-2|CDC25A', 'MAP4-CDC25A|1|fusion', 'ENSG00000164045|ENST00000302506|CDC25A', 'MAP4-CDC25A|2|fusion'] 112288 7883 TLYWRIYRETE True H1975_Epitope_Rep3 1528.7674278128795 1528.76578490379 35.297 3 -0.5090329927539771 0.14283357529365184 1.0 ['nc|ENSG00000168539|P11229-2|CHRM1', 'ENSG00000168539|ENST00000306960|CHRM1'] 1175 4200 AECPPPRQP True H1975_Epitope_Rep3 993.4702002653698 993.46910993586 21.273 2 -0.5090773742781293 0.14283357529365184 1.0 ['nc|ENSG00000255529|Q6EEV4-2|POLR2M', 'ENST00000380557.4_2_15:57998925-58001412:+|nuORF', 'ENST00000567643.1_1_15:57998925-57999700:+|nuORF', 'ENST00000299638.7_2_15:57998859-58000941:+|nuORF', 'nc|ENSG00000255529|Q6EEV4|POLR2M'] 134271 7257 WRRWCWRWPWR True NCI_RA007_Epitope_Rep2 1772.8735221609597 1772.87242993586 32.847 2 -0.5091000810315486 0.14283357529365184 1.0 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 14790 18601 DYAAIRDNYF True PC9_epitope_Rep4 1246.5618517207402 1246.56074993586 79.625 2 -0.5091037006181812 0.14283357529365184 1.0 ['ENSG00000006451|ENST00000005257|RALA', 'RALA|p.R84Q|1|0.33|ENSG00000006451|chr7:39690518-39690518|G/A|missense_variant', 'ENSG00000144118|ENST00000272519|RALB', 'nc|ENSG00000144118|P11234-3|RALB', 'nc|ENSG00000144118|P11234-2|RALB'] 68593 11248 LTYLNKHRRY True PC9_epitope_Rep4 1362.75205253226 1362.7504049037902 51.039 3 -0.5091988079205657 0.14284300301885547 1.0 ['nc|ENSG00000069188|Q58EX2-3|SDK2'] 12887 8213 DLLQPPLGY True PC9_epitope_Rep3 1014.5385970950199 1014.53750993586 36.571 2 -0.509201223917913 0.14284300301885547 1.0 ['ENSG00000102098|ENST00000251900|SCML2'] 73291 5530 NEIRRDHQP True H1975_Epitope_Rep2 1163.57956747355 1163.57846993586 26.279 2 -0.5092576315891064 0.14284300301885547 1.0 ['ENST00000392617.7_1_17:72667365-72740608:+|nuORF'] 24194 21920 EYTSILHLF True PC9_epitope_Rep5 1121.57571087973 1121.57460993586 89.357 2 -0.509301166747401 0.14289013526888816 1.0 ['LRIG2|p.S985Pfs*4|1|0.18|ENSG00000198799|chr1:113119502-113119502|C/-|frameshift_variant', 'ENSG00000198799|ENST00000361127|LRIG2'] 79777 8517 PHVVTVTMNGV True NCI_RA007_Epitope_Rep4 1152.5961290544801 1152.59449490379 39.554 3 -0.5093933549408789 0.14292077003018755 1.0 ['ENSG00000204217|ENST00000374580|BMPR2'] 53496 15496 KVLFKLLL True PC9_epitope_Rep5 972.6735744461998 972.67246993586 64.614 2 -0.5094754077314172 0.14296789944244664 1.0 ['nc|ENSG00000183780|Q8IY50|SLC35F3', 'ENSG00000183780|ENST00000366618|SLC35F3'] 39170 17202 HLFHMLFE True PC9_epitope_Rep1 1072.5164221818 1072.51587496793 70.986 1 -0.5095307522045972 0.1429890972668943 1.0 ['ENSG00000067992|ENST00000379162|PDK3', 'nc|ENSG00000067992|Q15120-2|PDK3'] 10909 5160 DASQHPDP True H1975_Epitope_Rep2 865.3566099817699 865.35550993586 24.925 2 -0.5095380034016077 0.1429890972668943 1.0 ['ENST00000523402.5_1_8:22411983-22419017:+|nuORF', 'ENST00000517535.5_1_8:22411983-22423386:+|nuORF', 'ENSG00000120896|ENST00000240123|SORBS3'] 43594 13625 IIGYLEIHP True PC9_epitope_Rep1 1053.5858816406098 1053.58478993586 57.265 2 -0.5095436824955517 0.1429890972668943 1.0 ['ENSG00000057935|ENST00000405094|MTA3', 'ENST00000478602.1_1_2:42946162-42950180:+|nuORF'] 63049 17462 LNKNQLTSL True PC9_epitope_Rep6 1029.5818588893299 1029.5807699358602 79.79 2 -0.5095829268657299 0.1429890972668943 1.0 ['nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF'] 122280 7497 VGRSFEPIIK True NCI_RA007_Epitope_Rep3 1144.6604435631998 1144.65880490379 36.613 3 -0.5095844821689741 0.1429890972668943 1.0 ['nc|ENSG00000179988|Q8IV42-2|PSTK'] 43335 10066 IHHLHEEWLIK True NCI_RA007_Epitope_Rep5 1453.78301830737 1453.7813849037902 45.357 3 -0.5096359370531922 0.14301265029440385 1.0 ['nc|ENSG00000166548|O00142-5|TK2', 'nc|ENSG00000166548|O00142-2|TK2', 'nc|ENSG00000166548|O00142-3|TK2', 'nc|ENSG00000166548|O00142-4|TK2', 'ENSG00000166548|ENST00000544898|TK2', 'nc|ENSG00000166548|O00142-6|TK2'] 128770 12844 VSQQRALAL True PC9_epitope_Rep4 984.5716285587998 984.57052993586 57.269 2 -0.5096461104358165 0.14301265029440385 1.0 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1'] 41830 8158 IDSRVQEY True PC9_epitope_Rep3 1008.4876241513198 1008.48652993586 36.358 2 -0.5097044028481786 0.14301265029440385 1.0 ['ENSG00000149346|ENST00000334534|SLX4IP'] 115513 7676 TVGLVSSTGPG True H1975_Epitope_Rep3 973.50802524273 973.50692993586 34.508 2 -0.5097095443450351 0.14301265029440385 1.0 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2'] 102379 11445 SPVQSLSLNLR True NCI_RA007_Epitope_Rep1 1212.68263555976 1212.68152993586 48.483 2 -0.5097268263276176 0.14302442564280177 1.0 ['ENST00000356245.7_1_5:151178821-151179531:+|nuORF'] 66526 11371 LSSFCKWQK True PC9_epitope_Rep2 1125.5641006502099 1125.56245490379 49.06 3 -0.5097338909897615 0.14302442564280177 1.0 ['ADAMTS12|p.Y616Tfs*25|1|0.23|ENSG00000151388|chr5:33637620-33637620|G/-|frameshift_variant', 'ADAMTS12|p.D612Tfs*29|1|0.19|ENSG00000151388|chr5:33637631-33637631|C/-|frameshift_variant', 'ADAMTS12|p.K880Rfs*51|1|0.33|ENSG00000151388|chr5:33595949-33595949|T/-|frameshift_variant', 'nc|ENSG00000151388|P58397-3|ADAMTS12', 'ADAMTS12|p.R1460Dfs*93|1|0.33|ENSG00000151388|chr5:33546127-33546127|T/-|frameshift_variant', 'ADAMTS12|p.E1422Sfs*131|1|0.18|ENSG00000151388|chr5:33549245-33549245|C/-|frameshift_variant', 'ENSG00000151388|ENST00000504830|ADAMTS12'] 8901 10431 AVGGGLLY True H1975_Epitope_Rep2 748.4119400299201 748.41139496793 45.138 1 -0.5098163879377876 0.14303384128240648 1.0 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 78694 15635 PEEETELDNL True PC9_epitope_Rep5 1187.51937777207 1187.5182899358601 65.15 2 -0.5098820209161864 0.14303384128240648 1.0 ['nc|ENSG00000117751|Q12972-2|PPP1R8', 'ENSG00000117751|ENST00000311772|PPP1R8'] 28196 7169 FRQQRKEHIR True NCI_RA007_Epitope_Rep4 1396.7799986155999 1396.7783549037902 34.199 3 -0.5098834038842283 0.14303384128240648 1.0 ['ENST00000466600.1_1_1:186823486-186908166:+|nuORF', 'ENSG00000116711|ENST00000367466|PLA2G4A'] 81889 9727 PSLINGVAP True NCI_RA007_Epitope_Rep1 866.4861675993399 866.48506993586 41.836 2 -0.5099750413990967 0.14306210626999571 1.0 ['MRTFA|p.K751N|1|0.21|ENSG00000196588|chr22:40418485-40418485|C/A|missense_variant'] 32384 11935 GGFGGFGG True PC9_epitope_Rep1 654.2761748330998 654.2756249679301 50.774 1 -0.5099852447930568 0.14306210626999571 1.0 ['ENSG00000171403|ENST00000246662|KRT9', 'KRT9|p.G130V|1|0.26|ENSG00000171403|chr17:41571604-41571604|C/A|missense_variant'] 131556 24454 VVVLLVLLCC True PC9_epitope_Rep1 1072.6388458136 1072.63774993586 98.906 2 -0.5100085852634618 0.1430762380646119 1.0 ['ENSG00000147408|ENST00000692225|CSGALNACT1', 'nc|ENSG00000147408|Q8TDX6-3|CSGALNACT1'] 19230 9869 ELKTVEKP True H1975_Epitope_Rep2 942.5385970950199 942.53750993586 42.947 2 -0.5100305102300557 0.14310686015831134 1.0 ['nc|ENSG00000152763|Q5VTH9-2|DNAI4', 'ENSG00000152763|ENST00000371026|DNAI4'] 18117 17559 EILRKVSIL True PC9_epitope_Rep1 1069.68593003505 1069.68482993586 72.333 2 -0.5101677409302856 0.14313276058242502 1.0 ['nc|ENSG00000186314|Q8N945-2|PRELID2', 'ENSG00000186314|ENST00000683046|PRELID2'] 108381 6696 TEDVKMSVP True H1975_Epitope_Rep2 1004.4848472699999 1004.48374993586 30.666 2 -0.5101722546176223 0.14313276058242502 1.0 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4'] 57398 8181 LEHTVTSLN True H1975_Epitope_Rep2 1012.5189242796 1012.51782993586 36.419 2 -0.5101773411280359 0.14313276058242502 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 84180 6451 QESPEKLDKK True NCI_RA007_Epitope_Rep1 1200.6350166609998 1200.6339099358602 29.115 2 -0.5102399653020164 0.1431633797242926 1.0 ['ZNF236|p.C1724Wfs*46|1|0.31|ENSG00000130856|chr18:76959752-76959752|T/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'ZNF236|p.K993Sfs*28|1|0.16|ENSG00000130856|chr18:76913818-76913818|A/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36-2|ZNF236', 'ZNF236|p.M461Nfs*104|1|0.37|ENSG00000130856|chr18:76881473-76881474|-/A|frameshift_variant'] 68058 15644 LTNLLGLH True PC9_epitope_Rep3 879.51780208079 879.51670993586 65.322 2 -0.5103618316549636 0.1432104872619342 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 8737 7279 AVDRLCLGI True NCI_RA007_Epitope_Rep5 958.5269868654999 958.52588993586 34.676 2 -0.5104459400279648 0.14325759324605086 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 90751 24500 RKREEEERRKQ True PC9_epitope_Rep2 1542.8338846632598 1542.83278993586 99.833 2 -0.5105631063256264 0.1432834836518327 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2'] 52268 11760 KNQRQRQHEV True PC9_epitope_Rep5 1321.69632856129 1321.69468490379 50.233 3 -0.5105767458932454 0.1432834836518327 1.0 ['nc|ENSG00000284701|A6NEH6|TMEM247'] 28328 12913 FSAFRILRSR True PC9_epitope_Rep1 1251.7200241279897 1251.71836490379 54.543 3 -0.5106154386456163 0.1432834836518327 1.0 ['ENSG00000084754|ENST00000380649|HADHA', 'nc|ENSG00000084754|P40939-2|HADHA'] 101768 6165 SPHPPSEVTA True PC9_epitope_Rep5 1020.48762415132 1020.48652993586 28.697 2 -0.5106356662621656 0.1432952465746649 1.0 ['nc|ENSG00000075975|Q9H000-2|MKRN2', 'ENSG00000075975|ENST00000170447|MKRN2'] 136385 16468 YHDPMLKLSI True PC9_epitope_Rep4 1215.63218021003 1215.63052490379 71.313 3 -0.5106497301320413 0.1432952465746649 1.0 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENSG00000163947|ENST00000296315|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-3|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-2|ARHGEF3'] 109045 8482 TFAAAVSGA True PC9_epitope_Rep6 793.39701824177 793.39646496793 42.34 1 -0.5106615656891906 0.1433093714964057 1.0 ['nc|ENSG00000167930|Q9H0X4-2|FAM234A', 'ENSG00000167930|ENST00000399932|FAM234A'] 100407 4456 SLNVFFGKPGP True NCI_RA007_Epitope_Rep2 1161.61824439805 1161.6166049037902 21.966 3 -0.5107147962384225 0.14333998318302474 1.0 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 115897 22607 TVPFLLLQ True PC9_epitope_Rep2 929.5586042636098 929.55750993586 92.458 2 -0.5107479218106525 0.14335410690144096 1.0 ['nc|ENSG00000074416|Q99685-2|MGLL', 'nc|ENSG00000074416|Q99685|MGLL', 'ENSG00000074416|ENST00000265052|MGLL'] 88439 5318 QYTPHSHQF True PC9_epitope_Rep3 1143.50975657823 1143.50812490379 25.533 3 -0.510783563004155 0.14336113950344553 1.0 ['ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR'] 66203 16876 LSPNHKVLHY True H1975_Epitope_Rep2 1206.65094150866 1206.6498499358602 70.159 2 -0.5107940248373076 0.14336113950344553 1.0 ['nc|ENSG00000155849|Q92556-2|ELMO1', 'AOAH-ELMO1|1|fusion', 'AOAH-ELMO1|2|fusion', 'nc|ENSG00000155849|Q92556-3|ELMO1', 'ENSG00000155849|ENST00000310758|ELMO1'] 22659 7739 ETSEEKPPAE True H1975_Epitope_Rep2 1115.4982484046698 1115.49714993586 34.72 2 -0.5108195427769467 0.14336113950344553 1.0 ['ENSG00000136478|ENST00000584379|TEX2', 'nc|ENSG00000136478|Q8IWB9-2|TEX2'] 34898 8542 GQVQPKDV True PC9_epitope_Rep5 869.4606811274899 869.45958993586 37.801 2 -0.5108289682613188 0.14336113950344553 1.0 ['ENSG00000166428|ENST00000392593|PLD4'] 115048 17013 TTPVKITLT True PC9_epitope_Rep3 972.58554728744 972.58444993586 70.597 2 -0.5108605002738307 0.14338938344873062 1.0 ['ENSG00000139970|ENST00000267484|RTN1'] 58163 19434 LESIATSDIP True PC9_epitope_Rep1 1044.5339056374 1044.53280993586 79.566 2 -0.5108814284644975 0.14338938344873062 1.0 ['ENSG00000140521|ENST00000268124|POLG'] 60885 19822 LKQTSRKKKKE True NCI_RA007_Epitope_Rep4 1372.8514322203598 1372.84978490379 85.681 3 -0.5109288119709559 0.14341526136195046 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 81644 6490 PRRYEEWKWFR True H1975_Epitope_Rep1 1651.83717913855 1651.8355349037902 30.025 3 -0.5109513827888724 0.14341526136195046 1.0 ['NOS3|p.V1069Cfs*24|1|0.24|ENSG00000164867|chr7:151013326-151013326|G/-|frameshift_variant', 'ENSG00000164867|ENST00000297494|NOS3', 'ENST00000468293.5_1_7:150707648-150709543:+|nuORF', 'ENST00000477227.1_1_7:150707648-150711254:+|nuORF'] 61545 8646 LLGGAKPGP True PC9_epitope_Rep1 808.48068829608 808.47958993586 38.095 2 -0.5110012809034737 0.14341526136195046 1.0 ['ENSG00000176678|ENST00000320241|FOXL1', 'FOXL1|p.G291A|1|0.34|ENSG00000176678|chr16:86579595-86579595|G/C|missense_variant'] 111219 15445 TLFWRSRV True PC9_epitope_Rep2 1063.59269835655 1063.59160993586 64.686 2 -0.5111253289258305 0.14352592104178685 1.0 ['ENST00000592915.1_1_17:42084599-42085966:+|nuORF', 'ENSG00000161653|ENST00000293404|NAGS'] 391 13726 AALEQLREKLE True H1975_Epitope_Rep1 1298.7194149913 1298.7183099358601 57.936 2 -0.5111340843108109 0.14352592104178685 1.0 ['ENSG00000116017|ENST00000263620|ARID3A'] 93225 24198 RRRRRRQQRRC True H1975_Epitope_Rep3 1625.9457926677699 1625.94415490379 100.81 3 -0.5111372403804203 0.1435400389015264 1.0 ['ENST00000397992.5_1_16:72984846-73092758:-|nuORF'] 109334 8634 TGGVSTGVI True H1975_Epitope_Rep2 789.4232329896099 789.4226849679301 38.167 1 -0.511217991926926 0.14357063972175976 1.0 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'TRPM1|p.S1552Vfs*9|1|0.19|ENSG00000134160|chr15:31001980-31001980|T/-|frameshift_variant', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-4|TRPM1'] 126016 18868 VPALLGLI True H1975_Epitope_Rep2 794.52657585934 794.5260249679301 78.336 1 -0.5113355522648334 0.1435847563789807 1.0 ['ENSG00000134285|ENST00000550765|FKBP11', 'ENST00000546847.5_1_12:49315769-49317670:-|nuORF'] 78704 17550 PEELKERRKLY True PC9_epitope_Rep1 1459.81471235847 1459.81360993586 72.299 2 -0.5113652171572548 0.1435988725708352 1.0 ['ENST00000472173.5_1_X:118112321-118146861:+|nuORF', 'nc|ENSG00000175556|Q496Y0-3|LONRF3', 'ENSG00000175556|ENST00000371628|LONRF3', 'nc|ENSG00000175556|Q496Y0-2|LONRF3'] 69710 12259 LVYYPPPSAP True PC9_epitope_Rep2 1102.5698972233 1102.5688099358601 52.465 2 -0.5115002024832783 0.14366006823688418 1.0 ['nc|ENSG00000176834|Q8N0Z9-2|VSIG10', 'ENSG00000176834|ENST00000359236|VSIG10'] 87593 9490 QTQQEEREVAL True NCI_RA007_Epitope_Rep1 1329.65245763029 1329.6513699358602 40.909 2 -0.5115177762910785 0.14366006823688418 1.0 ['ENST00000182527.3_1_6:52364724-52364970:-|nuORF'] 105690 20615 SVGRRKLAL True PC9_epitope_Rep3 998.6348975216998 998.63380993586 84.564 2 -0.5115705976455415 0.1436740882348094 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 140138 19007 YVRRLERK True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 78.075 2 -0.5116112350276698 0.1436740882348094 1.0 ['ENSG00000213380|ENST00000306875|COG8'] 40947 20005 HWKAFGDILY True H1975_Epitope_Rep2 1248.6291434349198 1248.6280499358602 82.927 2 -0.5116649404620879 0.1436740882348094 1.0 ['TRIM48|p.V197Cfs*9|2|0.22|ENSG00000150244|chr11:55269252-55269252|G/-|frameshift_variant', 'TRIM48|p.D219*|1|0.16|ENSG00000150244|chr11:55269317-55269318|-/T|frameshift_variant', 'ENSG00000150244|ENST00000417545|TRIM48'] 92091 9204 RPVKIRKIRAR True NCI_RA007_Epitope_Rep5 1391.93135430691 1391.93024993586 42.054 2 -0.5117100168943073 0.1436740882348094 1.0 ['ENSG00000120158|ENST00000381750|RCL1', 'ENST00000442869.5_1_9:4793091-4833155:+|nuORF'] 55213 12460 LAPQQCDSVP True PC9_epitope_Rep5 1056.4909952796 1056.4898899358602 52.927 2 -0.5117123522732742 0.1436740882348094 1.0 ['ENST00000521249.1_1_14:102697254-102697464:-|nuORF'] 64656 6565 LRIEVEAVR True NCI_RA007_Epitope_Rep4 1083.64004247179 1083.6389499358602 31.866 2 -0.5117245774896022 0.1436740882348094 1.0 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 60704 11866 LIYILFFLGDP True NCI_RA007_Epitope_Rep1 1309.73221152113 1309.73110993586 50.138 2 -0.5117268062750672 0.1436740882348094 1.0 ['nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3', 'ENSG00000139508|ENST00000266943|SLC46A3', 'nc|ENSG00000139508|Q7Z3Q1-2|SLC46A3'] 107434 16415 SYVKDLVVQR True PC9_epitope_Rep3 1205.6768219033297 1205.6751749037899 68.277 3 -0.511730117994428 0.1436740882348094 1.0 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 54070 21776 KYLVIGDLLF True PC9_epitope_Rep4 1179.69034670915 1179.68924993586 91.955 2 -0.5117497233521514 0.14368820039551747 1.0 ['ENST00000591770.1_1_17:76164697-76167257:+|nuORF', 'ENSG00000108639|ENST00000225777|SYNGR2', 'nc|ENSG00000108639|O43760-2|SYNGR2'] 58218 7855 LESSRVLDNP True H1975_Epitope_Rep1 1128.57750178488 1128.57640993586 35.166 2 -0.5118194599181631 0.14369520796256013 1.0 ['ENSG00000203737|ENST00000367685|GPR52'] 13575 5070 DPPLAKCTSR True H1975_Epitope_Rep3 1086.54917886206 1086.5480899358602 24.619 2 -0.5118507643597044 0.14369520796256013 1.0 ['nc|ENSG00000203710|P17927|CR1', 'ENSG00000203710|ENST00000367049|CR1'] 94151 3569 RWHELRRFWIR True NCI_RA007_Epitope_Rep3 1653.9116814914896 1653.9105899358601 19.889 2 -0.5118536119156459 0.14369520796256013 1.0 ['ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 26789 19251 FLDSYKLVI True PC9_epitope_Rep2 1096.61684741572 1096.61574993586 79.422 2 -0.5119049080519921 0.14369520796256013 1.0 ['ENSG00000186230|ENST00000334181|ZNF749', 'ZNF749|p.F592L|1|0.09|ENSG00000186230|chr19:57444924-57444924|C/G|missense_variant'] 23273 7962 EVRPTYFEMKN True NCI_RA007_Epitope_Rep1 1412.6758359271596 1412.6747299358601 34.964 2 -0.5119159321695235 0.14370695053224797 1.0 ['nc|ENSG00000164197|Q86T96-2|RNF180', 'ENSG00000164197|ENST00000389100|RNF180'] 83130 7921 PYQSLTED True PC9_epitope_Rep3 951.41854153199 951.41744993586 35.448 2 -0.5119453802254192 0.14370695053224797 1.0 ['ABCD2|p.D207Y|1|0.16|ENSG00000173208|chr12:39618997-39618997|C/A|missense_variant'] 118403 13102 VDLMKRCW True H1975_Epitope_Rep1 1049.5150422828099 1049.5139499358602 55.486 2 -0.5119486574916415 0.14371869232797257 1.0 ['ENSG00000170209|ENST00000303941|ANKK1'] 77883 12440 PAGSIISLNAA True PC9_epitope_Rep3 1012.55530978832 1012.55420993586 52.876 2 -0.5119743309696206 0.14371869232797257 1.0 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 35720 6049 GTSPVFLVSP True H1975_Epitope_Rep2 1002.5385970950199 1002.53750993586 28.245 2 -0.512021331715426 0.1437304333498105 1.0 ['ENSG00000170122|ENST00000382500|FOXD4'] 118936 8671 VEERPCQSL True PC9_epitope_Rep1 1059.5018943164698 1059.5007899358602 38.192 2 -0.5120424365254146 0.1437304333498105 1.0 ['ENSG00000081148|ENST00000193391|IMPG2'] 66268 5269 LSQEAERCKEE True NCI_RA007_Epitope_Rep2 1320.5979795292799 1320.5968899358602 25.117 2 -0.5120572978116487 0.1437751268700982 1.0 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF', 'ENST00000523091.5_1_8:23112705-23118098:+|nuORF'] 122263 12248 VGRRRIKL True NCI_RA007_Epitope_Rep3 996.6668663563198 996.66576993586 55.325 2 -0.5120622781652546 0.1437751268700982 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2'] 128785 4205 VSRDDAQL True PC9_epitope_Rep4 902.4457593393399 902.44466993586 22.546 2 -0.5120985221742775 0.14380334135169867 1.0 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 59197 12789 LGFTGAGIAA True PC9_epitope_Rep4 876.4705175351999 876.46942993586 57.056 2 -0.5121112944401536 0.14380334135169867 1.0 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 126273 9260 VPHLLTEA True PC9_epitope_Rep4 878.48616759934 878.48506993586 43.217 2 -0.5121327973118113 0.14381033971465287 1.0 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 78729 12202 PEFDWQDP True H1975_Epitope_Rep2 1032.4188758851599 1032.4177699358602 52.017 2 -0.5121350219381249 0.14381033971465287 1.0 ['nc|ENSG00000105607|Q92947-2|GCDH', 'ENSG00000105607|ENST00000222214|GCDH', 'ENST00000590627.5_1_19:13002616-13004571:+|nuORF', 'ENST00000585420.5_1_19:13002616-13007066:+|nuORF', 'ENST00000587832.5_1_19:13002118-13004571:+|nuORF', 'ENST00000421816.6_1_19:13002118-13008243:+|nuORF', 'ENST00000591043.1_1_19:13002118-13008243:+|nuORF', 'GCDH|p.Q167Sfs*57|1|0.36|ENSG00000105607|chr19:12893644-12893644|C/-|frameshift_variant'] 89123 13184 REFLRRFSIW True NCI_RA007_Epitope_Rep2 1408.7727879768397 1408.7716899358602 55.916 2 -0.5121675482862995 0.14381033971465287 1.0 ['nc|ENSG00000117322|P20023-2|CR2'] 96148 5648 SEEDTLTLVTA True H1975_Epitope_Rep3 1177.57141334493 1177.57030993586 26.755 2 -0.5121984656970677 0.14381033971465287 1.0 ['ENSG00000163295|ENST00000295463|ALPI'] 59014 18713 LGANGKVAVIV True PC9_epitope_Rep2 1039.6389798426299 1039.6378899358601 77.351 2 -0.5122311529157753 0.14385502471169687 1.0 ['nc|ENSG00000275395|Q9Y6R7|FCGBP', 'ENSG00000275395|ENST00000616721|FCGBP'] 63379 19420 LPFLNIEI True NCI_RA007_Epitope_Rep4 957.5535188831699 957.55297496793 83.965 1 -0.512278882395364 0.14385502471169687 1.0 ['nc|ENSG00000174485|Q7Z401|DENND4A', 'nc|ENSG00000174485|Q7Z401-2|DENND4A', 'ENSG00000174485|ENST00000443035|DENND4A'] 23126 13153 EVMEFDPLAP True PC9_epitope_Rep2 1146.52671208198 1146.52560993586 55.864 2 -0.5123213706296599 0.14386912900940677 1.0 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1'] 99769 5600 SLGMWLKVP True H1975_Epitope_Rep3 1029.5681234014899 1029.56702993586 26.58 2 -0.5123474389101131 0.14387849235635214 1.0 ['ENST00000496016.1_1_22:24487805-24487940:+|nuORF'] 98200 17496 SIDVFEDYI True PC9_epitope_Rep1 1099.5073565363898 1099.50624993586 72.094 2 -0.5123504892054807 0.14387849235635214 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 98679 9268 SIQLGQSEKER True NCI_RA007_Epitope_Rep2 1273.6626283911698 1273.66152993586 40.66 2 -0.5123658526276632 0.14387849235635214 1.0 ['ENSG00000135912|ENST00000392102|TTLL4'] 63782 13616 LPSESLGAPDP True H1975_Epitope_Rep2 1081.5291546101298 1081.52804993586 57.512 2 -0.5124112245975118 0.14390669785523671 1.0 ['ENST00000220562.8_1_8:28608908-28609217:+|nuORF'] 55683 6214 LDCAHTAASF True PC9_epitope_Rep4 1034.44913046762 1034.4480299358602 30.946 2 -0.5124179769680216 0.14390669785523671 1.0 ['ENST00000336812.4_1_4:24586045-24586090:-|nuORF'] 90909 6890 RLEALREAGT True PC9_epitope_Rep5 1114.6094706195 1114.60836993586 31.472 2 -0.5124956452263745 0.14401963529741216 1.0 ['ENST00000347404.9_1_12:88974054-88974564:-|nuORF'] 138503 19505 YRIREFRQTFR True PC9_epitope_Rep2 1570.84807817542 1570.84642490379 80.408 3 -0.5125329801779005 0.14403373525729724 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 94654 16606 RYLDWIKKI True PC9_epitope_Rep6 1233.7233781729299 1233.7217249037901 76.332 3 -0.5126004893422966 0.14411134903640258 1.0 ['nc|ENSG00000129455|O60259-3|KLK8', 'ENSG00000129455|ENST00000695909|KLK8', 'nc|ENSG00000129455|O60259-2|KLK8'] 122463 20748 VGSNSLHLPVP True PC9_epitope_Rep2 1118.60840799034 1118.60730993586 85.247 2 -0.5126149126710315 0.14411134903640258 1.0 ['nc|ENSG00000139625|Q12852|MAP3K12', 'ENSG00000139625|ENST00000547488|MAP3K12', 'ENST00000547020.1_1_12:53878838-53879309:-|nuORF', 'ENST00000433092.5_1_3:185155245-185169222:+|nuORF', 'nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 40794 11020 HVGSGDLFSGM-[Oxidation] True PC9_epitope_Rep4 1121.48115925233 1121.48006993586 50.164 2 -0.5128024131884114 0.1441913327074171 1.0 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 56998 9715 LEEEEEEDP True PC9_epitope_Rep2 1117.4298940613298 1117.42878993586 42.706 2 -0.5128789581771491 0.14423837132692055 1.0 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1', 'nc|ENSG00000124496|Q96PN7-2|TRERF1', 'nc|ENSG00000124496|Q96PN7-3|TRERF1'] 140001 19683 YVKVNRRFCL True PC9_epitope_Rep4 1296.7124962193998 1296.71138993586 83.831 2 -0.5129072174858239 0.14424771473276785 1.0 ['nc|ENSG00000140937|P55287-2|CDH11'] 12741 5971 DLGPASAPA True H1975_Epitope_Rep3 797.3919328613299 797.3913849679301 27.978 1 -0.5129099076002842 0.14424771473276785 1.0 ['ENST00000578295.5_1_17:29159009-29159327:+|nuORF'] 75288 12590 NPSPYHLYY True H1975_Epitope_Rep2 1152.52400966004 1152.52290993586 53.525 2 -0.5129270622157228 0.14424771473276785 1.0 ['ENSG00000020633|ENST00000308873|RUNX3', 'nc|ENSG00000020633|Q13761-2|RUNX3'] 84507 10090 QGSLKREER True H1975_Epitope_Rep3 1101.5890695280898 1101.5879699358602 43.852 2 -0.512939550443679 0.14425943310769637 1.0 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'nc|ENSG00000141664|Q9C0B9-2|ZCCHC2', 'ENST00000591632.5_1_18:60191431-60230292:+|nuORF'] 31986 4073 GETEYKFEWQK True NCI_RA007_Epitope_Rep2 1443.6670450652698 1443.66538490379 20.481 3 -0.5129924175582438 0.14425943310769637 1.0 ['ENSG00000138433|ENST00000342016|CIR1', 'ENST00000461454.1_1_2:175243642-175260410:-|nuORF', 'nc|ENSG00000138433|Q86X95-2|CIR1'] 55712 6644 LDDKYFKEWHK True NCI_RA007_Epitope_Rep2 1507.74596409231 1507.7443049037902 30.454 3 -0.5130293920985152 0.14430646595737673 1.0 ['ENST00000558906.5_1_15:50152393-50311102:-|nuORF', 'ENST00000559726.5_1_15:50152393-50311102:-|nuORF', 'ENSG00000104043|ENST00000284509|ATP8B4'] 71930 9750 MPSRPEASL True PC9_epitope_Rep5 986.4855159763399 986.48440993586 42.474 2 -0.5130890498183248 0.14433702794841813 1.0 ['ENST00000549913.6_1_12:113306162-113306792:+|nuORF'] 119335 6159 VEMDCFFP True NCI_RA007_Epitope_Rep5 986.38777608102 986.38666993586 30.369 2 -0.5131817569632595 0.1443840579710145 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-5|KALRN', 'ENST00000393496.5_1_3:124223749-124393462:+|nuORF'] 98310 9414 SIGAHVTASFW True NCI_RA007_Epitope_Rep2 1174.5771078620598 1174.5760099358602 41.229 2 -0.5132370773226591 0.14439797128178106 1.0 ['ENST00000451137.6_1_1:86048808-86048991:+|nuORF'] 354 7461 AAKQGLSNI True PC9_epitope_Rep4 900.5028802926399 900.50178993586 36.054 2 -0.5132490277275473 0.14439797128178106 1.0 ['ENST00000481441.1_1_6:33164057-33166316:-|nuORF'] 7541 8015 ASFERDDHGK True NCI_RA007_Epitope_Rep3 1160.52104953792 1160.51941490379 38.621 3 -0.5132875440244294 0.14439797128178106 1.0 ['ENSG00000127124|ENST00000372583|HIVEP3', 'nc|ENSG00000127124|Q5T1R4-2|HIVEP3'] 108317 12574 TEDLEFHGVM True H1975_Epitope_Rep2 1176.512124647 1176.51102993586 53.461 2 -0.5133481023306592 0.14439797128178106 1.0 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 4950 16076 ALIDCFLDGY True H1975_Epitope_Rep1 1128.5161473982798 1128.5150499358601 67.176 2 -0.5133646246546357 0.14439797128178106 1.0 ['ENSG00000069248|ENST00000261396|NUP133'] 125180 20092 VLQCGSDSLS True PC9_epitope_Rep1 1007.45936079815 1007.45826993586 82.112 2 -0.5133985121542387 0.14439797128178106 1.0 ['ENSG00000116478|ENST00000373548|HDAC1'] 45593 6668 ISGPHSYGP True H1975_Epitope_Rep3 913.42938099921 913.42828993586 30.603 2 -0.5134009315763874 0.14439797128178106 1.0 ['GLI1|p.M47I|1|0.26|ENSG00000111087|chr12:57464039-57464039|G/A|missense_variant'] 125838 7588 VNPGDVLT True PC9_epitope_Rep2 813.42323298961 813.42212993586 34.555 2 -0.5134128533589646 0.14439797128178106 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF'] 102193 19157 SPSKPPIQQP True PC9_epitope_Rep1 1077.5818588893299 1077.5807699358602 78.481 2 -0.5134478749761737 0.1444120601360141 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 124747 8261 VLKKKKKKKK True PC9_epitope_Rep4 1254.92274668582 1254.9211049037901 39.237 3 -0.5135223186162903 0.14445432391490481 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 64667 5226 LRKCLRKAKK True PC9_epitope_Rep4 1242.80706531058 1242.80596993586 26.802 2 -0.5135228108986856 0.14445432391490481 1.0 ['ENSG00000007908|ENST00000333360|SELE'] 46595 15720 ITSKSITYL True PC9_epitope_Rep4 1024.580461907 1024.57936993586 68.392 2 -0.5135696235162887 0.14445432391490481 1.0 ['ENST00000484167.5_1_2:242282419-242283206:+|nuORF'] 110050 18407 THYDHVLIEL True PC9_epitope_Rep3 1238.6295373577398 1238.62789490379 76.01 3 -0.5136650960624567 0.14453427296527424 1.0 ['ENSG00000076003|ENST00000264156|MCM6'] 115926 23093 TVPLDLLLVP True PC9_epitope_Rep4 1078.66379760814 1078.66327496793 97.048 1 -0.5136962141149778 0.14453626576235473 1.0 ['ENST00000501133.2_1_4:103749296-103764608:+|nuORF'] 13148 17315 DLSSRSLLGI True PC9_epitope_Rep1 1059.59242357303 1059.5913299358601 71.419 2 -0.5137039525052285 0.14453626576235473 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 67971 17860 LTLPSHRMP True PC9_epitope_Rep3 1050.56443500338 1050.56332993586 73.897 2 -0.5137370467028962 0.14453626576235473 1.0 ['ENST00000299613.10_1_11:9596239-9596734:+|nuORF'] 108009 10372 TDANIARELAE True H1975_Epitope_Rep1 1201.5938801250097 1201.59278993586 44.844 2 -0.5137692990486098 0.14453626576235473 1.0 ['ADGRL3|p.A636D|1|0.41|ENSG00000150471|chr4:61909579-61909579|C/A|missense_variant'] 98606 8390 SINRNDCDK True NCI_RA007_Epitope_Rep2 1063.4716568173499 1063.4705499358602 37.275 2 -0.5138511304058668 0.14453626576235473 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 80489 19167 PLLGIYPNEYK True PC9_epitope_Rep2 1305.69688864157 1305.6952349037902 79.099 3 -0.5138659186397635 0.14453626576235473 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|9|1|sense'] 28601 14764 FSQEVSRRSWG True H1975_Epitope_Rep1 1337.6476470333698 1337.64654993586 62.013 2 -0.5138896342511827 0.14453626576235473 1.0 ['nc|ENSG00000079691|Q5VZK9-2|CARMIL1', 'ENSG00000079691|ENST00000329474|CARMIL1'] 56296 20885 LDQRYLLVP True PC9_epitope_Rep1 1115.63389446219 1115.63278993586 85.154 2 -0.5138946662754306 0.14453626576235473 1.0 ['ENSG00000105671|ENST00000247003|DDX49', 'ENST00000601803.5_1_19:19032987-19035509:+|nuORF', 'nc|ENSG00000105671|Q9Y6V7-2|DDX49', 'ENST00000595858.5_1_19:19032475-19037138:+|nuORF'] 56979 10809 LEECPWRLPGP True PC9_epitope_Rep2 1295.6332428391897 1295.63158490379 46.893 3 -0.5138956215871137 0.14453626576235473 1.0 ['ENSG00000170279|ENST00000307003|C7orf33'] 44826 14752 IPVTQEVL True NCI_RA007_Epitope_Rep3 897.5171333744499 897.51602993586 65.44 2 -0.5139195949399835 0.14453626576235473 1.0 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 55488 7579 LAVKPLGP True NCI_RA007_Epitope_Rep1 793.5061747679299 793.50506993586 33.474 2 -0.5139735715641944 0.14453626576235473 1.0 ['ENSG00000186111|ENST00000335312|PIP5K1C', 'nc|ENSG00000186111|O60331-4|PIP5K1C', 'nc|ENSG00000186111|O60331-3|PIP5K1C', 'nc|ENSG00000186111|O60331-2|PIP5K1C'] 60456 19020 LILKPVTSP True PC9_epitope_Rep1 966.61136811246 966.61026993586 77.951 2 -0.5140191257788039 0.14453626576235473 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 51974 7367 KKYLIGPYYRK True H1975_Epitope_Rep1 1427.8289058706298 1427.82727490379 33.345 3 -0.5140286252415192 0.14453626576235473 1.0 ['ENSG00000150403|ENST00000434316|TMCO3', 'nc|ENSG00000150403|Q6UWJ1-2|TMCO3'] 13045 16698 DLRCPGSDVI True PC9_epitope_Rep2 1073.51754438061 1073.51644993586 69.477 2 -0.5140649895287637 0.14455034816534149 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'ADGRL2|p.A1202Rfs*21|1|0.14|ENSG00000117114|chr1:81987006-81987025|CAGCTCCTGTATTTAACTCA/-|frameshift_variant', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2'] 91556 9241 RPALFSSSA True PC9_epitope_Rep2 934.4872302285 934.48612993586 40.884 2 -0.514164901842919 0.14458089155198525 1.0 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5', 'ENST00000489842.1_1_9:135931263-135933364:+|nuORF'] 82769 6671 PVREMTLPSDP True H1975_Epitope_Rep2 1240.61217304144 1240.61053490379 30.569 3 -0.5143053000606369 0.1446255144032922 1.0 ['nc|ENSG00000255568|P59051|BRWD1-AS2', 'ENST00000603064.1_21:40685908-40686349:-|nuORF'] 128869 9348 VSSSDQQSL True PC9_epitope_Rep6 949.43525422529 949.43414993586 46.143 2 -0.5143072471270783 0.1446255144032922 1.0 ['ENSG00000142687|ENST00000325722|KIAA0319L', 'nc|ENSG00000142687|Q8IZA0-2|KIAA0319L'] 128264 23535 VSAIKSFEV True PC9_epitope_Rep5 978.5385970950199 978.53750993586 95.512 2 -0.5143140109537673 0.14463959440996857 1.0 ['ENST00000588685.1_1_19:56989432-56989657:+|nuORF'] 41782 14063 IDRDTKVI True PC9_epitope_Rep5 958.5447451046199 958.54364993586 59.107 2 -0.5145213400522592 0.1446536739531209 1.0 ['nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 111485 16107 TLLKPTDSY True H1975_Epitope_Rep2 1036.54407639828 1036.5429699358601 67.166 2 -0.5145627480188659 0.14466299070035388 1.0 ['ENST00000568469.5_1_16:18995385-19051723:+|nuORF', 'ENSG00000170537|ENST00000304381|TMC7'] 2211 9779 AENSKRLWLFY True H1975_Epitope_Rep1 1425.7404847890498 1425.7393899358601 42.544 2 -0.5145636924480372 0.14466299070035388 1.0 ['ENST00000507425.5_1_4:16181029-16193070:-|nuORF'] 60460 16676 LILKPVTSP True PC9_epitope_Rep6 966.61136811246 966.61026993586 76.615 2 -0.5145661612974989 0.14466299070035388 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 93136 19232 RRRRHRHLAV True NCI_RA007_Epitope_Rep3 1355.8235351934302 1355.82242993586 83.957 2 -0.5146257393590657 0.14469352821120549 1.0 ['ENST00000589935.1_1_18:54318575-54318788:+|nuORF'] 99465 15661 SLELNNPVP True PC9_epitope_Rep1 981.51311062317 981.51200993586 65.06 2 -0.5146656808242195 0.14470760570798427 1.0 ['ENSG00000075218|ENST00000454366|GTSE1'] 118727 9706 VEDDVGGV True PC9_epitope_Rep3 788.3552129994399 788.35466496793 42.289 1 -0.5147864218400193 0.14480397643108728 1.0 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1'] 19798 8809 ELTKDLVV True NCI_RA007_Epitope_Rep4 915.5276980581499 915.52660993586 40.694 2 -0.5148204797933649 0.14481566820276498 1.0 ['ENSG00000158158|ENST00000377075|CNNM4'] 138649 22710 YRRRLWKWWKS True NCI_RA007_Epitope_Rep1 1663.9211835460299 1663.92008993586 93.125 2 -0.5148414105026673 0.14481566820276498 1.0 ['ENST00000461642.2_1_20:25470551-25477423:-|nuORF'] 134274 16985 WRRWCWRWPWR True PC9_epitope_Rep1 1772.8735221609597 1772.87242993586 70.156 2 -0.5148891592058579 0.14484620068794127 1.0 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 66954 4613 LSYRPVAI True NCI_RA007_Epitope_Rep3 917.5334521449298 917.53234993586 25.06 2 -0.5149083337301715 0.1448531226857566 1.0 ['ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR', 'PKLR|p.D339Tfs*2|1|0.2|ENSG00000143627|chr1:155294336-155294336|C/-|frameshift_variant'] 69985 5544 LYEYLDIKCVP True NCI_RA007_Epitope_Rep2 1354.6842753525398 1354.68262490379 26.181 3 -0.5149102483740589 0.1448531226857566 1.0 ['ENSG00000258484|ENST00000310673|SPESP1'] 25074 8028 FDESPPPP True PC9_epitope_Rep2 884.3915985081599 884.39050993586 36.241 2 -0.5149429202740027 0.1448531226857566 1.0 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2'] 96969 14529 SEVFHVNISL True PC9_epitope_Rep4 1143.59242357303 1143.5913299358601 63.801 2 -0.5149672322738145 0.1448531226857566 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 137469 21579 YLPEELSAL True PC9_epitope_Rep1 1033.5331773614098 1033.53267496793 87.826 1 -0.5150007814187734 0.14486004377231812 1.0 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1'] 139628 19631 YTRVVRRTL True NCI_RA007_Epitope_Rep2 1162.6934750269797 1162.69183490379 81.31 3 -0.5150038603613586 0.14486004377231812 1.0 ['ENST00000477618.1_1_9:74817496-74842957:+|nuORF', 'nc|ENSG00000119125|Q9Y2T3-2|GDA', 'ENSG00000119125|ENST00000358399|GDA', 'nc|ENSG00000119125|Q9Y2T3-3|GDA'] 114794 17426 TTCNDIKDIY True H1975_Epitope_Rep2 1184.5383393948398 1184.53724993586 72.321 2 -0.5150466942777399 0.14486004377231812 1.0 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000465640.1_1_X:153670288-153671016:+|nuORF', 'ENST00000468483.5_1_X:153669954-153671016:+|nuORF', 'ENST00000491154.1_1_X:153670803-153671016:+|nuORF'] 71479 25316 MKKLKLKKMTS True PC9_epitope_Rep2 1334.81418440662 1334.81308993586 103.05 2 -0.5150685386323545 0.14486004377231812 1.0 ['ENST00000490863.5_1_1:54651905-54653456:-|nuORF', 'ENST00000420054.5_1_1:54651905-54661258:-|nuORF'] 30962 6440 GASTMVLHIP True H1975_Epitope_Rep2 1024.5375515491999 1024.5364499358602 29.691 2 -0.5151121424032751 0.1448881867996248 1.0 ['ENST00000462685.1_1_2:74159806-74173970:+|nuORF', 'nc|ENSG00000114956|Q16854-6|DGUOK'] 117954 9606 VARPAPVAV True PC9_epitope_Rep3 878.5337864980999 878.53268993586 41.901 2 -0.5151228357941398 0.1448881867996248 1.0 ['ENSG00000056097|ENST00000265069|ZFR', 'ENST00000505366.1_1_5:32406854-32444764:-|nuORF'] 139745 9687 YTYSQASEI True PC9_epitope_Rep3 1060.4713053808398 1060.47020993586 42.208 2 -0.5151339148933264 0.14489748905782077 1.0 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'TRERF1|p.E818Afs*14|1|0.26|ENSG00000124496|chr6:42256986-42256987|-/TG|frameshift_variant', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1'] 36762 16112 GVPEAVQLI True PC9_epitope_Rep6 924.5280324113198 924.52692993586 74.314 2 -0.5151349557687692 0.14489748905782077 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1'] 16174 11091 EEEWLYGDE True H1975_Epitope_Rep1 1168.4560492395196 1168.4549499358602 47.625 2 -0.5151361636872729 0.14489748905782077 1.0 ['nc|ENSG00000145216|Q6UN15-3|FIP1L1', 'nc|ENSG00000145216|Q6UN15-5|FIP1L1', 'nc|ENSG00000145216|Q6UN15-4|FIP1L1'] 126960 7865 VPVRLEAA True PC9_epitope_Rep4 853.5021520166498 853.50104993586 37.673 2 -0.5151993352717329 0.14490679039768334 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN'] 72638 13623 MVWWCGSL True PC9_epitope_Rep3 980.4248302960799 980.42372993586 57.465 2 -0.5152400135088567 0.14490679039768334 1.0 ['ENST00000446486.1_1_1:79128567-79129504:+|nuORF'] 8378 5774 ATNRPDAL True PC9_epitope_Rep1 856.4402800360799 856.43918993586 27.027 2 -0.5152481084460945 0.14490679039768334 1.0 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 100610 19569 SLQLAWTPV True PC9_epitope_Rep4 1013.55458151233 1013.55348993586 83.395 2 -0.5152835534958793 0.1449373128434631 1.0 ['nc|ENSG00000100197|P10635-2|CYP2D6', 'ENSG00000100197|ENST00000645361|CYP2D6', 'nc|ENSG00000205702|A0A087X1C5|CYP2D7'] 72884 17104 NATQFLALV True PC9_epitope_Rep4 975.5389314481898 975.53782993586 73.795 2 -0.5153413470265635 0.14497236114767045 1.0 ['ENSG00000162391|ENST00000302250|FAM151A', 'nc|ENSG00000162391|Q8WW52-2|FAM151A'] 91318 25898 RMGPPVGG True H1975_Epitope_Rep2 769.3904933926899 769.3899449679301 106.35 1 -0.5153783200632573 0.14497236114767045 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 11328 14739 DEWQFRLRDEF True NCI_RA007_Epitope_Rep3 1539.7106412127498 1539.7095499358602 65.385 2 -0.5154061343065983 0.14497236114767045 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENSG00000196208|ENST00000381486|GREB1', 'nc|ENSG00000196208|Q4ZG55-4|GREB1'] 46625 7009 ITTKLYDGFQY True H1975_Epitope_Rep1 1347.67106781655 1347.66996993586 31.995 2 -0.5154075036065864 0.14497236114767045 1.0 ['nc|ENSG00000143393|Q9UBF8-3|PI4KB', 'nc|ENSG00000143393|Q9UBF8-2|PI4KB', 'ENSG00000143393|ENST00000368873|PI4KB'] 78102 7099 PAPAAQTPL True NCI_RA007_Epitope_Rep3 864.4705175352 864.46942993586 35.038 2 -0.5154116170394113 0.14497236114767045 1.0 ['ENSG00000142959|ENST00000372207|BEST4'] 57600 14397 LELKVKTVKYF True H1975_Epitope_Rep1 1366.8224235078599 1366.8213299358601 60.574 2 -0.5154294499331435 0.14497236114767045 1.0 ['nc|ENSG00000113552|P46926-2|GNPDA1', 'ENSG00000113552|ENST00000311337|GNPDA1'] 39404 20849 HLWHPRRHYLL True PC9_epitope_Rep3 1526.8371195688999 1526.83602993586 85.469 2 -0.5155004593515393 0.14498642757259192 1.0 ['ENST00000448759.1_1_1:43352960-43353698:-|nuORF'] 59184 8993 LGFQKRWRK True NCI_RA007_Epitope_Rep5 1217.71454482473 1217.7128849037902 41.249 3 -0.5155437991854448 0.14500501719004458 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 63778 15709 LPSDWSYTL True PC9_epitope_Rep4 1080.5127762700001 1080.51166993586 68.351 2 -0.5155469978169317 0.14500501719004458 1.0 ['ENSG00000159208|ENST00000290363|CIART'] 70640 16321 MCACACMCTC True NCI_RA007_Epitope_Rep5 1038.25936447106 1038.2582699358602 69.534 2 -0.5155547379559986 0.14500501719004458 1.0 ['ENST00000544665.7_1_16:31343047-31343377:+|nuORF'] 134051 18681 WQGRRRASRRL True NCI_RA007_Epitope_Rep5 1440.82868014352 1440.82758993586 78.672 2 -0.5155745662542335 0.14500501719004458 1.0 ['TUT1|p.R782S|1|0.18|ENSG00000149016|chr11:62575375-62575375|G/T|missense_variant'] 125815 18967 VNLQLIQTL True PC9_epitope_Rep2 1040.62299542532 1040.62188993586 78.321 2 -0.5155909160191974 0.14500501719004458 1.0 ['ENST00000506496.1_1_5:41929805-41930057:+|nuORF'] 12293 9608 DISRNQLL True PC9_epitope_Rep1 957.5243440132099 957.52324993586 41.813 2 -0.5155950621462427 0.14500501719004458 1.0 ['ENSG00000187554|ENST00000642603|TLR5'] 9100 15244 AVLDRNVAI True PC9_epitope_Rep6 969.5607295219299 969.55962993586 70.744 2 -0.5156207840547139 0.1450190814580866 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 61171 19658 LLDLAQRKL True PC9_epitope_Rep5 1068.66552894364 1068.6644299358602 80.671 2 -0.5156400264318389 0.14504720860611245 1.0 ['ENSG00000159915|ENST00000683810|ZNF233', 'ENST00000590614.5_1_19:44600547-44605100:+|nuORF', 'ENSG00000178386|ENST00000434772|ZNF223', 'ENSG00000124459|ENST00000269973|ZNF45', 'ENSG00000267680|ENST00000693561|ZNF224', 'ENSG00000256294|ENST00000262894|ZNF225'] 40986 9668 HYCVSCTI True PC9_epitope_Rep1 924.38335940692 924.38226993586 42.043 2 -0.5156482966597756 0.14504720860611245 1.0 ['ENST00000444468.1_1_X:128542382-128542532:+|nuORF'] 98059 6717 SHVALAVAS True PC9_epitope_Rep1 853.46576650793 853.46466993586 30.64 2 -0.5156684959506185 0.14505888545299034 1.0 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 69080 21594 LVIYITYF True PC9_epitope_Rep2 1030.57391997458 1030.57282993586 88.534 2 -0.5156891964896028 0.14505888545299034 1.0 ['chr2:142883035-142885349|132|18.84|0.23|6.38|+|1|TE_info:L1PA6,L1PA6_dup723,L1,LINE,donor,-,142882331,142883035|None,KYNU|4'] 93341 9031 RRTPGGVF True NCI_RA007_Epitope_Rep4 888.4929843152798 888.49188993586 41.571 2 -0.5157368923203485 0.14506817546341222 1.0 ['ENSG00000164902|ENST00000297540|PHAX', 'PHAX|p.L290V|2|0.27|ENSG00000164902|chr5:126617286-126617286|C/G|missense_variant'] 15234 5603 EAGDAVVAK True H1975_Epitope_Rep3 858.44469671018 858.44358993586 26.592 2 -0.5157467313480465 0.14506817546341222 1.0 ['ENSG00000142444|ENST00000270502|TIMM29'] 55162 4566 LANSLAC[Carbamidomethyl]QGK True NCI_RA007_Epitope_Rep2 1060.5335290773498 1060.5324299358601 22.39 2 -0.5157488760059985 0.14506817546341222 1.0 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 95552 19264 SARVAELLLL True PC9_epitope_Rep4 1083.6651945904698 1083.6640899358601 82.202 2 -0.515799757703915 0.14509868421052632 1.0 ['CDKN2A|p.A76Vfs*69|1|0.27|ENSG00000147889|chr9:21971129-21971132|GTGG/-|frameshift_variant', 'CDKN2A|p.V82Cfs*64|1|0.38|ENSG00000147889|chr9:21971115-21971115|C/-|frameshift_variant', 'CDKN2A|p.A102Rfs*44|1|0.15|ENSG00000147889|chr9:21971055-21971055|C/-|frameshift_variant', 'ENST00000380142.4_1_9:22005988-22008700:-|nuORF', 'nc|ENSG00000147889|P42771-2|CDKN2A', 'chr9:21971208-21994821|337|10.17|0.28|5.18|-|ENST00000498628|CDKN2A,CDKN2A', 'CDKN2A|p.W110Rfs*5|1|0.43|ENSG00000147889|chr9:21971018-21971031|GGCAGACGGCCCCA/-|frameshift_variant', 'ENSG00000147883|ENST00000276925|CDKN2B', 'chr9:21968242-21970976|324|12.19|0.04|8.36|-|ENST00000579122|CDKN2A,CDKN2A', 'CDKN2A|p.R124Hfs*19|1|0.12|ENSG00000147889|chr9:21970979-21970988|GCGACATCGC/-|frameshift_variant', 'CDKN2A|p.G111Afs*35|1|0.58|ENSG00000147889|chr9:21971027-21971027|C/-|frameshift_variant', 'ENSG00000147889|ENST00000304494|CDKN2A', 'nc|ENSG00000147889|P42771-4|CDKN2A', 'chr9:21968771-21970902|352|13.67|0.1|7.04|-|ENST00000498124|CDKN2A,CDKN2A'] 18135 16381 EIMSSTNTMP True PC9_epitope_Rep5 1109.47329661013 1109.4721899358601 68.006 2 -0.5159108483579097 0.14514563905198927 1.0 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47'] 110657 12324 TIVQLFSEERR True H1975_Epitope_Rep1 1376.7412130650398 1376.7401099358601 52.431 2 -0.5159593536898062 0.1451596986941219 1.0 ['ENST00000308893.8_1_16:29985169-29989140:+|nuORF'] 99673 20891 SLGASIATGIL True PC9_epitope_Rep2 1001.57571087973 1001.57517496793 85.8 1 -0.5159766222860295 0.14516898281391333 1.0 ['ENSG00000173214|ENST00000671876|MFSD4B'] 81031 14048 PNYRRSRL True H1975_Epitope_Rep1 1060.5890099584399 1060.5879099358601 59.2 2 -0.5159850310272887 0.14516898281391333 1.0 ['ENSG00000176399|ENST00000325870|DMRTA1'] 36035 15544 GVDRHKQFWRY True PC9_epitope_Rep1 1490.7531151614198 1490.75200993586 64.616 2 -0.5160072082595574 0.14516898281391333 1.0 ['ENSG00000151729|ENST00000281456|SLC25A4'] 62068 13316 LLMRWDLIEDK True H1975_Epitope_Rep1 1430.7591716282998 1430.75806993586 56.324 2 -0.5160809639289723 0.1451830411472552 1.0 ['ENST00000427177.5_1_17:75495228-75495576:+|nuORF'] 124412 14356 VLEGHVAYV True PC9_epitope_Rep3 985.5232813840499 985.52218993586 60.311 2 -0.5160895134249178 0.14519471122220762 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B', 'nc|ENSG00000188649|Q6DHV5-1|CC2D2B', 'nc|ENSG00000188649|Q6DHV5-2|CC2D2B'] 42856 17328 IFPQETHTL True PC9_epitope_Rep6 1084.55530978832 1084.5542099358602 79.265 2 -0.5161044412892697 0.14519471122220762 1.0 ['ENST00000581549.1_1_17:70599848-70614472:-|nuORF'] 17252 15317 EHAPSIIFM-[Oxidation] True PC9_epitope_Rep2 1059.5059174481898 1059.50480993586 64.198 2 -0.5161675301532944 0.1452087684388824 1.0 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 22393 12297 ETEVPMDSL True PC9_epitope_Rep6 1019.4481274081098 1019.44702993586 58.69 2 -0.5162618579954078 0.14521804906926264 1.0 ['ST18|p.G16E|1|0.39|ENSG00000147488|chr8:52214211-52214211|C/T|missense_variant'] 64818 19592 LSAEVEPFIP True PC9_epitope_Rep1 1100.57537652656 1100.57426993586 80.189 2 -0.516274024458725 0.14521804906926264 1.0 ['SECISBP2L|p.A823Qfs*12|1|0.13|ENSG00000138593|chr15:48996524-48996524|A/-|frameshift_variant', 'ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L', 'SECISBP2L|p.P614Hfs*12|1|0.22|ENSG00000138593|chr15:49011754-49011754|G/-|frameshift_variant', 'ENST00000557923.1_1_15:49329786-49338496:-|nuORF', 'ENST00000380927.6_2_15:49327640-49338496:-|nuORF'] 134559 25000 WVRRRPPP True PC9_epitope_Rep1 1062.6199161639 1062.61880993586 101.09 2 -0.5162786447882863 0.14521804906926264 1.0 ['ZNF831|p.S1319Pfs*7|1|0.08|ENSG00000124203|chr20:59206984-59206985|AG/-|frameshift_variant'] 98384 12682 SIHVTVLQY True NCI_RA007_Epitope_Rep3 1058.5760452329 1058.57494993586 57.129 2 -0.5163064222295654 0.14523210497755415 1.0 ['ENSG00000110799|ENST00000261405|VWF'] 130863 18525 VVGLQEALA True PC9_epitope_Rep5 898.5123823471799 898.51128993586 76.281 2 -0.516390403688613 0.1452790475877265 1.0 ['ENST00000588974.1_1_19:34839831-34843857:+|nuORF'] 115886 23131 TVPDLLLPL True PC9_epitope_Rep3 979.59538369515 979.59428993586 94.241 2 -0.5164571755677355 0.14530954534243196 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'ENST00000535958.1_1_12:6443054-6450989:-|nuORF', 'ENST00000538363.1_1_12:6443236-6450989:-|nuORF', 'nc|ENSG00000067182|P19438-5|TNFRSF1A', 'nc|ENSG00000067182|P19438-4|TNFRSF1A'] 18305 7210 EITESASLYFT True H1975_Epitope_Rep1 1259.5921487895098 1259.5910499358602 32.747 2 -0.516515644643922 0.14534004209418575 1.0 ['TG|p.V2411Gfs*5|1|0.24|ENSG00000042832|chr8:133030004-133030005|-/CCGGAGAG|frameshift_variant', 'nc|ENSG00000042832|P01266-2|TG', 'ENSG00000042832|ENST00000220616|TG'] 67366 15004 LTDRMNLL True PC9_epitope_Rep2 974.52190148506 974.52080993586 62.968 2 -0.5165427293192965 0.14538459008846066 1.0 ['ENSG00000174607|ENST00000310836|UGT8'] 45600 13547 ISGQIVLAGDP True PC9_epitope_Rep2 1068.5815245361598 1068.5804299358601 57.402 2 -0.5165604345237211 0.14538459008846066 1.0 ['nc|ENSG00000073146|Q9BXT6-5|MOV10L1', 'nc|ENSG00000073146|Q9BXT6-2|MOV10L1', 'nc|ENSG00000073146|Q9BXT6-4|MOV10L1', 'ENSG00000073146|ENST00000262794|MOV10L1'] 4884 11391 ALGEVPDGTV True PC9_epitope_Rep5 956.4814761417199 956.48036993586 48.814 2 -0.5166086399939743 0.14539625123314698 1.0 ['nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2'] 131489 19032 VVVARALRGRG True NCI_RA007_Epitope_Rep1 1152.7203584811598 1152.7192699358602 78.171 2 -0.5166211759405758 0.14539625123314698 1.0 ['ENSG00000243477|ENST00000443094|NAA80', 'nc|ENSG00000243477|Q93015-2|NAA80'] 49517 6460 KKETSGAVL True NCI_RA007_Epitope_Rep2 931.5338460677498 931.53274993586 29.738 2 -0.516710453109634 0.14540552093780312 1.0 ['TTBK2|p.V616A|1|0.1|ENSG00000128881|chr15:42775286-42775286|A/G|missense_variant'] 49363 6715 KIGFKPAG True H1975_Epitope_Rep2 816.4857736765199 816.48466993586 30.741 2 -0.5167150428786623 0.14540552093780312 1.0 ['ENSG00000023697|ENST00000428559|DERA'] 57329 7830 LEGRLSLN True PC9_epitope_Rep2 900.50288029264 900.50178993586 35.488 2 -0.5167366869583696 0.14540552093780312 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 59285 8960 LGGVIAAR True PC9_epitope_Rep1 755.46537258511 755.46426993586 39.308 2 -0.5167781518384181 0.1454195712218861 1.0 ['ENSG00000180425|ENST00000623205|C11orf71'] 38093 4447 HENNNGQAAF True NCI_RA007_Epitope_Rep4 1100.4635346618 1100.4624299358602 23.478 2 -0.5169134151225724 0.1454781593700166 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 52864 5405 KRDREKRDDQD True PC9_epitope_Rep1 1459.71276647107 1459.71112490379 25.623 3 -0.5169169617051481 0.1454781593700166 1.0 ['nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B', 'nc|ENSG00000138709|Q659C4-3|LARP1B'] 128520 6519 VSGLAVHS True PC9_epitope_Rep5 768.4130026590801 768.41190993586 30.048 2 -0.5169224619326077 0.1454781593700166 1.0 ['ENST00000460259.1_1_21:44299781-44299832:+|nuORF'] 107382 14388 SYSQNLCLL True NCI_RA007_Epitope_Rep5 1039.5008316873098 1039.4997299358602 62.026 2 -0.516959514895679 0.1454898157129001 1.0 ['nc|ENSG00000172977|Q92993-2|KAT5', 'nc|ENSG00000172977|Q92993-4|KAT5', 'nc|ENSG00000172977|Q92993|KAT5', 'ENSG00000172977|ENST00000341318|KAT5'] 81024 12056 PNVLKVFL True NCI_RA007_Epitope_Rep5 928.57458868092 928.57348993586 53.031 2 -0.516962776108334 0.1454898157129001 1.0 ['ENSG00000147234|ENST00000683843|FRMPD3', 'FRMPD3|p.G1413Afs*12|2|0.13|ENSG00000147234|chrX:107602173-107602173|G/-|frameshift_variant', 'ENST00000477796.1_1_X:106788951-106797806:+|nuORF'] 39918 8075 HQLFCQDVLK True NCI_RA007_Epitope_Rep1 1229.62267815549 1229.6210249037902 35.408 3 -0.5169769909404607 0.14555318099621897 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 89272 9152 RELEDLKY True H1975_Epitope_Rep2 1064.5502244078798 1064.54912993586 40.154 2 -0.5169912806884657 0.14556483429773803 1.0 ['nc|ENSG00000198003|A5D8V7-2|ODAD3', 'ENSG00000198003|ENST00000356392|ODAD3'] 58297 7036 LETIEVYDP True H1975_Epitope_Rep2 1077.52300660053 1077.52190993586 31.988 2 -0.5170471953229213 0.14556483429773803 1.0 ['ENSG00000188522|ENST00000388995|FAM83G'] 12221 9684 DIPPPLIEEA True H1975_Epitope_Rep1 1092.5702911461199 1092.56918993586 42.174 2 -0.5170719813560622 0.14557887988427334 1.0 ['ENSG00000148400|ENST00000651671|NOTCH1'] 98423 11889 SIIQHDQPV True PC9_epitope_Rep3 1035.5349086969097 1035.53380993586 50.751 2 -0.5170879531177498 0.145592925009041 1.0 ['ENSG00000135226|ENST00000335568|UGT2B28'] 56102 11165 LDLNPQNINK True NCI_RA007_Epitope_Rep2 1167.62478633047 1167.62368993586 48.012 2 -0.5171389100829084 0.14567032678019592 1.0 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1'] 13775 5920 DQQDVFCFR True H1975_Epitope_Rep3 1156.4971432892 1156.4960499358601 27.78 2 -0.5171392389886699 0.14567032678019592 1.0 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'STAT2|p.L535Ifs*6|1|0.33|ENSG00000170581|chr12:56348778-56348779|-/T|frameshift_variant', 'ENST00000557417.5_3_12:56748997-56753873:-|nuORF', 'ENST00000556140.5_1_12:56748997-56753873:-|nuORF'] 127788 1524 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 8.4543 3 -0.5171983013400298 0.145684369709223 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 56512 6188 LDTSDLEP True PC9_epitope_Rep5 888.40764249512 888.40654993586 28.787 2 -0.5172248269262729 0.14569841217660015 1.0 ['ENSG00000175087|ENST00000374269|PDIK1L'] 84438 8837 QGIQKLLQ True PC9_epitope_Rep4 926.5549158654999 926.55380993586 41.524 2 -0.5172319427584617 0.14571245418235013 1.0 ['ENSG00000180934|ENST00000641900|OR56A1', 'nc|ENSG00000180934|Q8NGH5|OR56A1'] 112582 6911 TPAPPGPAT True PC9_epitope_Rep5 807.41266830591 807.41156993586 31.553 2 -0.5172640018556158 0.14572649572649574 1.0 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO'] 124586 22228 VLGWVWRCLW True PC9_epitope_Rep6 1316.6852188424 1316.68357490379 98.458 3 -0.5173660464838564 0.14575697309380187 1.0 ['ENST00000465508.5_1_1:6695257-6695521:-|nuORF'] 59780 5823 LHAAAYWGQVP True PC9_epitope_Rep2 1211.6087423435101 1211.60710490379 27.791 3 -0.5174545099894163 0.14578744945925512 1.0 ['ENSG00000160972|ENST00000435887|PPP1R16A'] 42483 6902 IERANSVTWNP True NCI_RA007_Epitope_Rep2 1285.64149902377 1285.6404099358601 31.466 2 -0.5174679015121694 0.1458014890784478 1.0 ['ENSG00000128683|ENST00000358196|GAD1', 'ENST00000488724.5_1_2:171705783-171716389:+|nuORF'] 139509 10282 YTIVFIYYAF True NCI_RA007_Epitope_Rep1 1298.6587122276999 1298.6576099358601 44.002 2 -0.5174948700322682 0.1458319637104727 1.0 ['nc|ENSG00000050130|Q9P055-3|JKAMP', 'ENSG00000050130|ENST00000616435|JKAMP', 'nc|ENSG00000050130|Q9P055-5|JKAMP', 'nc|ENSG00000050130|Q9P055-2|JKAMP'] 4688 16301 ALDGSLSLFSL True PC9_epitope_Rep1 1121.59684024713 1121.59574993586 67.521 2 -0.5176286515297476 0.14590934490352694 1.0 ['ENST00000381440.4_1_16:19128639-19128831:+|nuORF'] 110994 10621 TLDEKHLLLK True H1975_Epitope_Rep1 1208.71287305888 1208.71176993586 45.81 2 -0.5176935425379776 0.14590934490352694 1.0 ['nc|nan|Q9H6X5-2|C19orf44', 'ENSG00000105072|ENST00000221671|C19orf44'] 82823 17147 PVSPRGMVT True PC9_epitope_Rep4 942.49568673722 942.49458993586 73.963 2 -0.5177386829248725 0.1459514535982514 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A'] 13281 7710 DLWRVWQWDEK True NCI_RA007_Epitope_Rep1 1559.7521121019097 1559.7504749037903 33.984 3 -0.5177544278318253 0.1459514535982514 1.0 ['ENSG00000109111|ENST00000314616|SUPT6H', 'SUPT6H|p.H813Ifs*24|1|0.36|ENSG00000109111|chr17:28684908-28684908|C/-|frameshift_variant', 'nc|ENSG00000109111|Q7KZ85-3|SUPT6H'] 118034 11777 VATDHVAFLL True PC9_epitope_Rep4 1084.59169529704 1084.5905899358602 53.067 2 -0.5177958450039853 0.1459514535982514 1.0 ['ENSG00000149635|ENST00000279028|OCSTAMP'] 13524 18392 DPGYQLQTL True PC9_epitope_Rep2 1033.50802524273 1033.5069299358602 76.076 2 -0.5178121761092672 0.14599835661462612 1.0 ['ENST00000373122.8_1_6:41126504-41129123:-|nuORF', 'ENSG00000095970|ENST00000373113|TREM2'] 99290 11784 SLDGRELAL True PC9_epitope_Rep2 972.5240096600398 972.52290993586 50.659 2 -0.5178155029027189 0.1460099914546769 1.0 ['ENSG00000183798|ENST00000332312|EMILIN3'] 53547 8449 KVQDINDNAP True H1975_Epitope_Rep1 1112.5462016566 1112.5451099358602 37.427 2 -0.5178221758994949 0.1460099914546769 1.0 ['ENSG00000145526|ENST00000382275|CDH18', 'CDH18|p.G288Wfs*7|1|0.17|ENSG00000145526|chr5:19591194-19591195|-/A|frameshift_variant', 'CDH18|p.E391Kfs*26|1|0.12|ENSG00000145526|chr5:19571661-19571661|C/-|frameshift_variant', 'nc|ENSG00000145526|Q13634-2|CDH18', 'CDH8|p.L633Ffs*3|1|0.52|ENSG00000150394|chr16:61655477-61655477|C/-|frameshift_variant', 'ENSG00000150394|ENST00000577390|CDH8'] 135667 12332 YEGKFQIQS True H1975_Epitope_Rep1 1098.53457434374 1098.53346993586 52.465 2 -0.5178396617659183 0.14602162552995696 1.0 ['ENST00000395834.5_1_14:50796549-50796777:-|nuORF'] 75309 15574 NPTQLNTVEFL True PC9_epitope_Rep6 1274.65066672514 1274.6495699358602 72.115 2 -0.5178461995370489 0.14602162552995696 1.0 ['nc|ENSG00000135457|Q12800-2|TFCP2', 'nc|ENSG00000135457|Q12800-3|TFCP2', 'nc|ENSG00000135457|Q12800-4|TFCP2', 'ENSG00000135457|ENST00000257915|TFCP2'] 60772 11451 LKEVRRHLQHF True PC9_epitope_Rep4 1461.83169983529 1461.8300549037901 51.814 3 -0.5179424000413747 0.14606132307995662 1.0 ['ENST00000509144.2_1_8:106809432-107072670:-|nuORF', 'ENST00000520594.5_1_8:106799777-107072670:-|nuORF', 'ENST00000520078.5_1_8:106810397-107072670:-|nuORF'] 100533 18865 SLPSWSCSLSI True PC9_epitope_Rep2 1178.56416021986 1178.56306993586 77.93 2 -0.5179556392308776 0.14606132307995662 1.0 ['ENST00000320623.9_1_16:69752155-69760649:-|nuORF'] 78420 4383 PAYKMQFKNN True NCI_RA007_Epitope_Rep3 1239.6070280913498 1239.6053849037899 24.015 3 -0.5179792114537431 0.14606132307995662 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 92569 24553 RRATVLVLVV True H1975_Epitope_Rep1 1124.7393625902398 1124.7382699358602 101.75 2 -0.5179854317290957 0.14606132307995662 1.0 ['nc|ENSG00000168398|P30411-2|BDKRB2', 'ENSG00000168398|ENST00000554311|BDKRB2'] 71659 12808 MLSGPRRAEI True PC9_epitope_Rep5 1128.60736244452 1128.60571490379 54.277 3 -0.5180789733796886 0.14610821735486945 1.0 ['ENST00000454547.1_1_1:19209079-19212092:-|nuORF', 'ENST00000494072.3_3_1:19209920-19216616:-|nuORF', 'nc|ENSG00000159423|P30038-2|ALDH4A1', 'nc|ENSG00000159423|P30038-3|ALDH4A1', 'ALDH4A1|p.A523Gfs*8|1|0.29|ENSG00000159423|chr1:18874474-18874475|-/C|frameshift_variant', 'ENSG00000159423|ENST00000375341|ALDH4A1'] 13269 8124 DLWARPGWRTR True NCI_RA007_Epitope_Rep2 1412.7425504777198 1412.7414499358601 36.233 2 -0.5181165529297708 0.1461362777476545 1.0 ['ENST00000412023.5_1_12:6993021-6993087:+|nuORF', 'ENST00000433346.5_1_12:6993021-7014770:+|nuORF'] 76790 7554 NVDLTKFQ True H1975_Epitope_Rep3 963.5025459394699 963.50144993586 34.038 2 -0.5181416372246812 0.1461362777476545 1.0 ['TUBA3D|p.E254K|1|0.31|ENSG00000075886|chr2:131480453-131480453|G/A|missense_variant'] 37137 13881 GVTELRLLY True H1975_Epitope_Rep2 1062.60734536118 1062.6062499358602 58.537 2 -0.5181847152418965 0.1461503072524728 1.0 ['ENST00000455517.5_2_3:12330435-12330558:+|nuORF'] 78246 10487 PAQRGRRARRG True NCI_RA007_Epitope_Rep2 1279.74461616639 1279.7435099358602 45.385 2 -0.5182643875588363 0.14618076663983043 1.0 ['ENST00000377126.3_1_9:73028468-73028720:-|nuORF'] 45174 24117 IRDYKRRF True NCI_RA007_Epitope_Rep2 1152.651610215 1152.64996490379 101.31 3 -0.5184475670014173 0.14622765509989485 1.0 ['ENSG00000206181|ENST00000332567|ELOA2'] 85512 17186 QLKAAVTP True PC9_epitope_Rep6 826.4912529797799 826.49070496793 78.695 1 -0.5184813804419642 0.14627454201922288 1.0 ['ENSG00000186532|ENST00000305513|SMYD4', 'SMYD4|p.L481S|1|0.43|ENSG00000186532|chr17:1799952-1799952|A/G|missense_variant'] 30935 16475 GASILREAAAI True PC9_epitope_Rep4 1070.6084079903399 1070.60730993586 71.342 2 -0.5185841939580478 0.14631181205848529 1.0 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS'] 85958 7276 QPETEPLER True NCI_RA007_Epitope_Rep5 1097.5353026197297 1097.5342099358602 34.664 2 -0.5186463456636319 0.14631181205848529 1.0 ['ENST00000361483.4_1_12:111798605-111799217:-|nuORF'] 117660 10493 VAITEALL True NCI_RA007_Epitope_Rep3 828.4956696538799 828.49456993586 48.333 2 -0.5186759822081123 0.14631181205848529 1.0 ['GCH1|p.R198L|1|0.28|ENSG00000131979|chr14:54845801-54845801|C/A|missense_variant'] 17254 14635 EHAPSIIFM-[Oxidation] True PC9_epitope_Rep4 1059.5059174481898 1059.50480993586 64.224 2 -0.518716187713552 0.14631181205848529 1.0 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 139622 11926 YTRQERYRARP True PC9_epitope_Rep1 1494.7803925384198 1494.77875490379 50.738 3 -0.5187482051040037 0.14631181205848529 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 68462 15668 LTVDDIMPALK True PC9_epitope_Rep3 1214.6580606046998 1214.6569699358602 65.411 2 -0.5188033333367913 0.14634226478947282 1.0 ['KCNQ4|p.V530L|1|0.39|ENSG00000117013|chr1:40833088-40833088|G/T|missense_variant'] 54741 4889 LAEPM[Oxidation]TYKLM[Oxidation] True H1975_Epitope_Rep3 1227.58793320043 1227.5868299358601 23.933 2 -0.5188349996783033 0.14637031196096792 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1'] 811 4315 ADAITKEAKKA True NCI_RA007_Epitope_Rep2 1144.6451874218799 1144.6435349037902 21.425 3 -0.5188363109120909 0.14637031196096792 1.0 ['ENST00000497856.6_1_5:112214485-112228245:-|nuORF', 'ENSG00000129625|ENST00000379638|REEP5'] 104489 17764 SSPARALLL True PC9_epitope_Rep5 926.5549158654999 926.55380993586 73.347 2 -0.5188893970823502 0.14640076223018036 1.0 ['ENSG00000184992|ENST00000341446|BRI3BP', 'BRI3BP|p.G130A|2|0.37|ENSG00000184992|chr12:125025063-125025063|G/C|missense_variant'] 106008 17879 SVLLSWEI True PC9_epitope_Rep6 945.51713337445 945.51602993586 81.398 2 -0.5190911867072633 0.14650853360053878 1.0 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD'] 127183 7022 VQFPGMAP True PC9_epitope_Rep5 845.4105601309299 845.40946993586 31.98 2 -0.5191208851905301 0.14650853360053878 1.0 ['ENSG00000154262|ENST00000284425|ABCA6', 'nc|ENSG00000154262|Q8N139-2|ABCA6', 'ABCA6|p.G1034Afs*30|1|0.12|ENSG00000154262|chr17:69097939-69097939|C/-|frameshift_variant', 'nc|ENSG00000154262|Q8N139-3|ABCA6'] 138604 17350 YRQRCWRLWMR True NCI_RA007_Epitope_Rep2 1652.8292743904797 1652.8281699358602 72.23 2 -0.5191249487415425 0.14650853360053878 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|452|3|anti-sense'] 101824 14192 SPIKTETFFKE True H1975_Epitope_Rep3 1325.68671788069 1325.68562993586 59.925 2 -0.5191556960262778 0.14651773981603153 1.0 ['nc|ENSG00000170854|Q8IUF8-4|RIOX2', 'ENSG00000170854|ENST00000394198|RIOX2', 'nc|ENSG00000170854|Q8IUF8-2|RIOX2'] 108167 12128 TDSPVLLQA True H1975_Epitope_Rep2 942.5022115863 942.50110993586 51.734 2 -0.5191837005431971 0.14651773981603153 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant', 'NEB|p.K783Sfs*21|1|0.29|ENSG00000183091|chr2:151688359-151688359|T/-|frameshift_variant', 'ENST00000489048.1_1_2:152547165-152552100:-|nuORF'] 29228 16094 FVDEHTINI True PC9_epitope_Rep1 1086.53457434374 1086.53346993586 66.722 2 -0.5192344527652253 0.14651773981603153 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant', 'nc|ENSG00000123384|Q07954-2|LRP1'] 99402 21100 SLEDTIYVM True PC9_epitope_Rep5 1069.5001629809701 1069.49906993586 86.226 2 -0.5192579564217203 0.14653175867676285 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 53172 15474 KSRTRWIHSQI True PC9_epitope_Rep2 1410.7844152896998 1410.7827749037901 64.797 3 -0.5192822455285763 0.14654337007046303 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|56|2|sense'] 102232 6834 SPSSTTLTSA True PC9_epitope_Rep4 950.4556553167 950.45454993586 33.507 2 -0.5192830317312054 0.14654337007046303 1.0 ['ENST00000489678.1_1_14:74762662-74763162:-|nuORF'] 109149 13397 TFNDNPLY True H1975_Epitope_Rep3 982.4396113297398 982.43850993586 56.798 2 -0.5193082110017669 0.14655257366225405 1.0 ['CNTN6|p.S419Vfs*33|1|0.22|ENSG00000134115|chr3:1329816-1329817|-/A|frameshift_variant', 'ENST00000394261.2_1_3:1189741-1339676:+|nuORF', 'ENSG00000134115|ENST00000446702|CNTN6'] 19683 7078 ELSDEDDEDYW True NCI_RA007_Epitope_Rep2 1414.50484990674 1414.50319490379 32.156 3 -0.5193452844273324 0.14655257366225405 1.0 ['nc|ENSG00000135679|Q00987-3|MDM2'] 137250 21943 YLFNENFHLL True PC9_epitope_Rep5 1308.65027280232 1308.64916993586 89.446 2 -0.5193453143150193 0.14655257366225405 1.0 ['ENST00000368520.1_1_10:135345455-135368187:+|nuORF', 'ENSG00000130649|ENST00000252945|CYP2E1'] 16198 4910 EEFERIHQA True NCI_RA007_Epitope_Rep4 1157.54653600977 1157.54488490379 25.344 3 -0.5193660382048157 0.1465593693545738 1.0 ['nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 58875 16908 LFSSDSGFSNY True H1975_Epitope_Rep2 1222.51423282198 1222.5131299358602 70.283 2 -0.5193716275597993 0.1465593693545738 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000525371.1_1_8:145542526-145550314:-|nuORF', 'ENST00000531896.5_1_8:145541583-145550314:-|nuORF'] 33314 7192 GLDEGALR True PC9_epitope_Rep1 829.4293809992099 829.42828993586 32.477 2 -0.5194254708759414 0.1465593693545738 1.0 ['nc|ENSG00000183963|P53814|SMTN', 'nc|ENSG00000183963|P53814-6|SMTN', 'ENSG00000183963|ENST00000333137|SMTN', 'ENST00000482444.5_2_22:31477435-31483924:+|nuORF', 'ENST00000497697.5_1_22:31477435-31484100:+|nuORF', 'ENST00000475548.5_1_22:31477435-31484563:+|nuORF'] 52779 11956 KQQQQLVL True NCI_RA007_Epitope_Rep5 983.5763795860697 983.57528993586 52.645 2 -0.5194369164263537 0.1465593693545738 1.0 ['ENST00000393077.2_1_10:114575138-114575192:+|nuORF'] 7312 12550 ARRRRRLQLEW True NCI_RA007_Epitope_Rep2 1538.9018450837798 1538.9007499358602 53.43 2 -0.5194447507574418 0.14656375728713358 1.0 ['ENST00000504087.5_1_4:125633653-125633758:-|nuORF'] 95470 8030 SALSVSISNV True PC9_epitope_Rep4 975.52367530687 975.52256993586 38.338 2 -0.5194503292808823 0.14656375728713358 1.0 ['KCNJ10|p.R375S|1|0.67|ENSG00000177807|chr1:160041410-160041410|G/T|missense_variant'] 108158 7977 TDRRYNNGTWY True PC9_epitope_Rep3 1444.6483753093598 1444.64671490379 35.661 3 -0.5194534848489114 0.14656375728713358 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'ENST00000488064.5_1_18:6961676-6965410:-|nuORF', 'ENST00000490190.1_1_18:6964066-6965410:-|nuORF'] 14633 17612 DVLVQTMGAP True H1975_Epitope_Rep2 1029.5164817514499 1029.5153899358602 73.059 2 -0.5194702271809115 0.14656375728713358 1.0 ['ENSG00000197892|ENST00000524189|KIF13B', 'nc|ENSG00000197892|Q9NQT8-2|KIF13B'] 62108 14553 LLNRMCRLE True PC9_epitope_Rep1 1146.6001688891 1146.5990699358601 60.802 2 -0.5195478944177337 0.14656375728713358 1.0 ['CCDC150|p.V101L|1|0.25|ENSG00000144395|chr2:196656757-196656757|G/C|missense_variant'] 77737 6303 PAAPAPGED True PC9_epitope_Rep5 823.37119741675 823.37010993586 29.219 2 -0.5196174250941892 0.14657777193904362 1.0 ['ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA', 'nc|ENSG00000198408|O60502-2|OGA', 'nc|ENSG00000198408|O60502-4|OGA', 'ENST00000263979.7_1_1:25944342-25980780:+|nuORF', 'ENSG00000117643|ENST00000374332|MAN1C1'] 58131 8245 LESDMSNGWDP True H1975_Epitope_Rep1 1249.4921174784101 1249.49102993586 36.656 2 -0.5196439026635068 0.14658937896154225 1.0 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ATXN2L|p.S306Tfs*111|1|0.35|ENSG00000168488|chr16:28829941-28829941|G/-|frameshift_variant'] 132617 11588 VYPRVSVATI True NCI_RA007_Epitope_Rep4 1103.6338944621898 1103.63278993586 51.521 2 -0.5196461159207868 0.14658937896154225 1.0 ['ENST00000351266.8_1_9:34551676-34551760:-|nuORF'] 12070 11642 DIEMMLLL True PC9_epitope_Rep6 976.4973265299999 976.49622993586 55.903 2 -0.5197028170179968 0.1466009852216749 1.0 ['ENST00000261590.12_1_18:29126842-29127004:+|nuORF'] 68080 7025 LTPARAPSP True H1975_Epitope_Rep2 908.5079656730799 908.50686993586 31.947 2 -0.5197069351524245 0.1466009852216749 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 72740 22031 MYTMMELDY True H1975_Epitope_Rep3 1195.4599550451098 1195.4588499358601 92.124 2 -0.5197202733909446 0.14661499811168946 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 5467 16311 ALYREITLK True PC9_epitope_Rep2 1105.64954452633 1105.64844993586 67.986 2 -0.5197402996784798 0.14662901054152572 1.0 ['ENSG00000181544|ENST00000650831|FANCB', 'FANCB|p.A843S|1|0.69|ENSG00000181544|chrX:14843620-14843620|C/A|missense_variant'] 37671 5832 HAIESLLQ True NCI_RA007_Epitope_Rep2 909.49198125577 909.49088993586 27.303 2 -0.5197957705397473 0.14663098443554212 1.0 ['ENSG00000121542|ENST00000492595|SEC22A'] 63343 6719 LPEKKVPVP True H1975_Epitope_Rep3 1005.6222671493298 1005.6211699358599 30.801 2 -0.5199298260533752 0.14663098443554212 1.0 ['TTN|p.V12186L|2|0.17|ENSG00000155657|chr2:178636092-178636092|C/A|missense_variant'] 116524 18187 TYEAQFFGF True NCI_RA007_Epitope_Rep4 1108.48656152216 1108.48546993586 78.707 2 -0.5199628280388786 0.14663098443554212 1.0 ['ENSG00000167842|ENST00000611091|MIS12'] 58876 17137 LFSTAFSE True H1975_Epitope_Rep3 900.42289863644 900.42180993586 71.548 2 -0.520072203528478 0.14663098443554212 1.0 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENSG00000090565|ENST00000262305|RAB11FIP3', 'nc|ENSG00000090565|O75154-2|RAB11FIP3'] 100918 21909 SLSLSRPGRI True PC9_epitope_Rep5 1084.63529144452 1084.6341899358601 89.313 2 -0.5200929578472793 0.14663098443554212 1.0 ['ENST00000592537.5_2_19:36230817-36230898:-|nuORF'] 22967 20564 EVIFKYLAT True PC9_epitope_Rep5 1082.60119735158 1082.60010993586 84.144 2 -0.5201076748936028 0.14663098443554212 1.0 ['nc|nan|Q5JPI3-2|C3orf38', 'ENSG00000179021|ENST00000318887|C3orf38'] 106049 8056 SVLRIQTVI True NCI_RA007_Epitope_Rep4 1027.6389798426299 1027.6378899358601 37.762 2 -0.5201328717888709 0.14665659733053144 1.0 ['ENSG00000119574|ENST00000594051|ZBTB45'] 47135 21307 IWETFRRWHRK True NCI_RA007_Epitope_Rep1 1613.86914797317 1613.8680499358602 87.182 2 -0.5202137549652565 0.14665659733053144 1.0 ['ENST00000416673.6_1_2:114369763-114384446:-|nuORF'] 34194 4596 GPGSLTSRTRP True H1975_Epitope_Rep2 1127.6047195922301 1127.60362993586 22.783 2 -0.520220456869312 0.14665659733053144 1.0 ['nc|ENSG00000078319|A4D2B8-3|PMS2P1', 'nc|ENSG00000078319|A4D2B8-2|PMS2P1', 'nc|ENSG00000078319|A4D2B8|PMS2P1'] 77834 12283 PAGAIAPLG True PC9_epitope_Rep6 765.43848913093 765.4379449679301 58.632 1 -0.5203120945008061 0.14666579111534295 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 19719 22123 ELSLMQPLV True PC9_epitope_Rep3 1028.55761828744 1028.55652993586 90.394 2 -0.5203486664920387 0.14666579111534295 1.0 ['ENST00000523562.5_1_16:67201036-67203307:+|nuORF', 'ENST00000521314.5_1_16:67198707-67203685:+|nuORF', 'nc|ENSG00000102878|Q9ULV5-2|HSF4', 'ENSG00000102878|ENST00000521374|HSF4'] 140698 7476 YYQDTPKQI True PC9_epitope_Rep6 1154.5607890915799 1154.5596899358602 38.002 2 -0.5203494952362374 0.14666579111534295 1.0 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 39725 9064 HPVLMSEA True PC9_epitope_Rep3 882.4269384710601 882.42584993586 39.807 2 -0.5203960103035732 0.14667739181824152 1.0 ['ENSG00000136518|ENST00000429709|ACTL6A', 'nc|ENSG00000136518|O96019-2|ACTL6A', 'ENSG00000077080|ENST00000160382|ACTL6B'] 89560 23667 RERRYRERKLQ True PC9_epitope_Rep4 1588.9022390065995 1588.90114993586 99.381 2 -0.5204370217612924 0.14667739181824152 1.0 ['ENSG00000126870|ENST00000407559|DYNC2I1', 'DYNC2I1|p.L508Ffs*8|2|0.37|ENSG00000126870|chr7:158911610-158911611|-/T|frameshift_variant', 'DYNC2I1|p.N527Ifs*23|1|0.41|ENSG00000126870|chr7:158911662-158911662|A/-|frameshift_variant'] 70313 22601 LYPGIVTFVI True PC9_epitope_Rep4 1120.65323292444 1120.65267496793 95.165 1 -0.520548935627386 0.14670781555230888 1.0 ['ENSG00000188037|ENST00000343257|CLCN1'] 27235 8447 FLVKGAQG True NCI_RA007_Epitope_Rep1 818.4650382319398 818.46394993586 36.856 2 -0.5205621791541595 0.14672182277816082 1.0 ['ALKBH2|p.S56Afs*34|1|0.22|ENSG00000189046|chr12:109092622-109092622|A/-|frameshift_variant', 'ENST00000536720.1_1_12:109530171-109530633:-|nuORF', 'nc|ENSG00000189046|Q6NS38-2|ALKBH2', 'ENSG00000189046|ENST00000429722|ALKBH2'] 35443 8198 GTEALALAN True PC9_epitope_Rep5 858.44469671018 858.44358993586 36.473 2 -0.5206088068278613 0.14675224478405752 1.0 ['ENST00000531958.5_1_11:67183879-67184254:+|nuORF'] 133409 10367 WFTMSFSYY True H1975_Epitope_Rep1 1230.50558271458 1230.5044899358602 44.825 2 -0.5206653533496888 0.14676143265158728 1.0 ['SV2A|p.E490Sfs*3|1|0.38|ENSG00000159164|chr1:149908118-149908118|C/-|frameshift_variant', 'nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 41427 6518 IATPSFVP True PC9_epitope_Rep2 830.4538048419 830.45270993586 30.488 2 -0.5206739170000576 0.14676143265158728 1.0 ['ENSG00000156049|ENST00000341700|GNA14'] 100668 7665 SLQVPLKDAK True H1975_Epitope_Rep1 1097.6444591458896 1097.6433699358602 34.455 2 -0.5207011637290546 0.14676143265158728 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant'] 75992 5086 NRIKDQYKV True PC9_epitope_Rep1 1162.6458561282202 1162.64422490379 24.418 3 -0.5207597741204569 0.14677543784777505 1.0 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant'] 121231 18637 VGGQLWLVL True PC9_epitope_Rep3 983.5804023373499 983.57930993586 76.908 2 -0.520849386141837 0.14682227036964085 1.0 ['nc|ENSG00000071909|Q8WXR4-6|MYO3B', 'ENST00000409940.6_1_2:171034716-171376051:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-3|MYO3B', 'nc|ENSG00000071909|Q8WXR4-5|MYO3B', 'nc|ENSG00000071909|Q8WXR4-2|MYO3B', 'ENST00000438642.6_1_2:171034716-171400468:+|nuORF', 'nc|ENSG00000071909|Q8WXR4-4|MYO3B', 'ENSG00000071909|ENST00000408978|MYO3B', 'nc|ENSG00000071909|Q8WXR4-7|MYO3B', 'ENST00000602629.1_1_2:171055868-171092621:+|nuORF'] 19897 11572 ELWNKYRERQR True H1975_Epitope_Rep3 1576.8222573503997 1576.82116993586 49.64 2 -0.5208863988600314 0.14685268773081658 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1'] 108579 13529 TEIANLLKE True H1975_Epitope_Rep2 1029.57062549929 1029.57007496793 57.176 1 -0.5209346763332249 0.1468995174473952 1.0 ['ENSG00000170345|ENST00000303562|FOS', 'nc|ENSG00000170345|P01100-3|FOS', 'nc|ENSG00000170345|P01100-2|FOS'] 112515 13905 TPAAADICFT True PC9_epitope_Rep4 1008.45863252216 1008.45752993586 61.389 2 -0.5209671229746655 0.1469135194577117 1.0 ['ENST00000483780.5_1_X:153641548-153647973:+|nuORF', 'ENST00000426231.5_2_X:153641633-153647973:+|nuORF', 'ENST00000476679.5_1_X:153641063-153647973:+|nuORF', 'nc|ENSG00000102125|Q16635-9|TAFAZZIN', 'nc|ENSG00000102125|Q16635-8|TAFAZZIN', 'nc|ENSG00000102125|Q16635-7|TAFAZZIN', 'nc|ENSG00000102125|Q16635-6|TAFAZZIN', 'nc|ENSG00000102125|Q16635|TAFAZZIN', 'nc|ENSG00000102125|Q16635-4|TAFAZZIN', 'nc|ENSG00000102125|Q16635-2|TAFAZZIN', 'nc|ENSG00000102125|Q16635-5|TAFAZZIN', 'ENSG00000102125|ENST00000601016|TAFAZZIN'] 63121 13536 LNPLGRAVL True PC9_epitope_Rep6 951.5865503469499 951.5860049679301 63.799 1 -0.521116484091783 0.14692752100840337 1.0 ['ENST00000471809.5_1_22:37159849-37172159:-|nuORF'] 16894 11906 EGAFLGPRLP True H1975_Epitope_Rep1 1055.5763795860698 1055.5752899358602 50.797 2 -0.5211284561647164 0.14694152209949285 1.0 ['ENST00000541956.5_1_12:6940459-6946454:+|nuORF'] 5377 10292 ALTVDAHTV True PC9_epitope_Rep3 925.48689587533 925.48578993586 44.536 2 -0.5211548108135916 0.14695311089593147 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 111155 14605 TLESSILLQ True NCI_RA007_Epitope_Rep3 1002.5597264624198 1002.55862993586 64.791 2 -0.5211794806886793 0.14695311089593147 1.0 ['ENSG00000114999|ENST00000233336|TTL', 'ENST00000476615.1_1_2:113258880-113278003:+|nuORF'] 86204 14904 QPVQLRVL True PC9_epitope_Rep2 951.5865503469499 951.5860049679301 62.593 1 -0.5212443206014788 0.1469835226153745 1.0 ['SOS1|p.E1074Kfs*32|1|0.33|ENSG00000115904|chr2:38995248-38995249|TC/-|frameshift_variant', 'ENSG00000115904|ENST00000402219|SOS1'] 84150 7924 QERFTQDTQP True H1975_Epitope_Rep1 1248.5734790335998 1248.5723899358602 35.43 2 -0.5212695893720267 0.14699752186828155 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 16083 6492 EEDIEKHPELK True NCI_RA007_Epitope_Rep1 1365.6776097489699 1365.6759749037901 29.271 3 -0.5213018690071362 0.14701152066169954 1.0 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D'] 122711 10891 VGTWMECSVSC True PC9_epitope_Rep5 1200.46135202744 1200.46024993586 46.88 2 -0.5213271221263555 0.1470206935031262 1.0 ['nc|ENSG00000160323|Q76LX8-3|ADAMTS13', 'ENSG00000160323|ENST00000355699|ADAMTS13', 'nc|ENSG00000160323|Q76LX8|ADAMTS13', 'ENST00000485925.5_1_9:136305545-136324175:+|nuORF'] 131982 11731 VYGGGAAEI True PC9_epitope_Rep2 835.4075829254699 835.40703496793 50.456 1 -0.5213307648530794 0.1470206935031262 1.0 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 83591 19110 QDTFSVAVSF True PC9_epitope_Rep4 1099.51858992643 1099.51807496793 81.598 1 -0.5213511266115588 0.1470206935031262 1.0 ['nc|ENSG00000179094|O15534-4|PER1', 'ENSG00000179094|ENST00000317276|PER1', 'ENST00000579065.1_1_17:8052750-8054072:-|nuORF'] 104905 15948 STFPQFIKA True PC9_epitope_Rep6 1037.5545815123298 1037.5534899358602 73.64 2 -0.5213628300650668 0.1470346909974072 1.0 ['ENSG00000040487|ENST00000375153|SLC66A1'] 45772 4873 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 23.87 2 -0.5214209776831589 0.14708150773724543 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 108899 8862 TESLWEDLP True PC9_epitope_Rep5 1088.50260550912 1088.5015099358602 39.031 2 -0.5215095854788694 0.14709309003790552 1.0 ['ENST00000485768.1_1_5:66437998-66438421:+|nuORF'] 118393 14088 VDLESLEI True PC9_epitope_Rep3 916.4753281321199 916.47422993586 59.274 2 -0.5215225382097799 0.14709309003790552 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-3|VPS13B'] 140405 8070 YYFCRWYRNRK True NCI_RA007_Epitope_Rep1 1653.7986854548496 1653.79702490379 35.389 3 -0.5215546088198948 0.14711866631661855 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 100519 18917 SLPRSRWWIT True H1975_Epitope_Rep1 1300.7040397106798 1300.70294993586 78.878 2 -0.5215565577376817 0.14711866631661855 1.0 ['ENST00000425394.6_1_12:56713258-56713451:-|nuORF'] 104355 11525 SSFKDDVDLK True PC9_epitope_Rep1 1152.5662683948397 1152.56516993586 49.211 2 -0.5215942526489041 0.14711866631661855 1.0 ['nc|ENSG00000183853|Q96J84-2|KIRREL1', 'ENSG00000183853|ENST00000359209|KIRREL1', 'nc|ENSG00000183853|Q96J84-3|KIRREL1'] 121951 14884 VGPRRKLNEI True NCI_RA007_Epitope_Rep4 1180.70403971068 1180.70294993586 64.714 2 -0.5216382861068034 0.147132660595619 1.0 ['ENST00000586695.1_1_18:77287338-77287574:+|nuORF'] 95512 6382 SAPTPAPAA True PC9_epitope_Rep1 781.39701824177 781.39592993586 29.356 2 -0.521698129812626 0.1471466544153841 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 63422 7606 LPGLQVAR True H1975_Epitope_Rep3 852.51813643396 852.51702993586 34.238 2 -0.5217345824195379 0.1471770554744286 1.0 ['FOXD4L1|p.Q56L|1|0.19|ENSG00000184492|chr2:113499423-113499423|A/T|missense_variant'] 109351 9592 TGIEDLQGK True H1975_Epitope_Rep1 959.4923751785899 959.49126993586 41.821 2 -0.5217631521577057 0.147205040279578 1.0 ['ENST00000488971.1_1_2:86683605-86693535:+|nuORF'] 22102 5168 ESVLGGPAK True NCI_RA007_Epitope_Rep2 856.4654321547599 856.46432993586 24.723 2 -0.521775489752528 0.147205040279578 1.0 ['ENST00000423485.5_1_17:38557145-38557208:-|nuORF'] 111706 14424 TLPRSSSMAA True PC9_epitope_Rep5 1019.50697969691 1019.50588993586 60.481 2 -0.5217850825467572 0.14721903199343725 1.0 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'ENST00000576225.5_1_17:79058928-79084738:+|nuORF'] 111200 5077 TLFNRTLQG True PC9_epitope_Rep4 1048.5665431783598 1048.5654499358602 26.179 2 -0.5218692115223289 0.14724942986989548 1.0 ['ENST00000422239.5_1_7:30028219-30028396:+|nuORF'] 119634 13496 VESEDDPV True PC9_epitope_Rep6 888.3712569863999 888.37014993586 63.62 2 -0.5219056810913375 0.1472561725863342 1.0 ['CDKL4|p.K45N|1|0.18|ENSG00000205111|chr2:39229398-39229398|C/G|missense_variant', 'CDKL4|p.G138Rfs*7|1|0.27|ENSG00000205111|chr2:39204569-39204570|-/T|frameshift_variant', 'nc|ENSG00000205111|Q5MAI5-2|CDKL4', 'ENSG00000205111|ENST00000699627|CDKL4', 'nc|ENSG00000205111|Q5MAI5|CDKL4'] 104931 21316 STFVSFLQKEK True PC9_epitope_Rep3 1312.7027022979998 1312.70160993586 87.287 2 -0.5219108800787041 0.1472561725863342 1.0 ['ENST00000592859.1_1_19:9869411-9879277:-|nuORF', 'ENST00000589453.5_1_19:9875628-9879277:-|nuORF'] 75204 5344 NPASAQAAIQA True H1975_Epitope_Rep2 1040.5250722891997 1040.5239699358601 25.603 2 -0.5219433721155384 0.1472561725863342 1.0 ['ENSG00000161082|ENST00000292672|CELF5', 'nc|ENSG00000159409|Q5SZQ8-4|CELF3', 'nc|ENSG00000159409|Q5SZQ8-3|CELF3', 'nc|ENSG00000159409|Q5SZQ8-2|CELF3', 'ENSG00000159409|ENST00000290583|CELF3'] 24394 19799 FAEQLTAFQVW True PC9_epitope_Rep5 1338.66083748602 1338.6597499358602 81.203 2 -0.5219480806748145 0.1472561725863342 1.0 ['ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR', 'ENST00000577161.5_1_17:78519375-78883449:+|nuORF', 'RPTOR-STXBP4|1|fusion', 'ENST00000574767.5_1_17:78681670-78831736:+|nuORF', 'RPTOR-STXBP4|2|fusion'] 65649 12191 LSGSLDYNVV True PC9_epitope_Rep4 1065.53423999057 1065.5331499358601 54.712 2 -0.5219677504694022 0.14727016208412624 1.0 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000446265.3_1:149647111-149647681:+|nuORF'] 26478 9682 FIQHFCLY True H1975_Epitope_Rep3 1069.5055231449298 1069.5044299358601 42.261 2 -0.5220307923399785 0.14728415112292273 1.0 ['ENSG00000040531|ENST00000046640|CTNS', 'nc|ENSG00000040531|O60931-2|CTNS'] 121558 19484 VGKRCRCP True PC9_epitope_Rep2 917.4687607967298 917.46766993586 80.327 2 -0.5220693439155142 0.14730729482784075 1.0 ['ENST00000377327.8_1_20:20028515-20028989:-|nuORF'] 3834 5825 AGYNNTFP True PC9_epitope_Rep5 882.38718183406 882.38608993586 27.398 2 -0.5220734367005968 0.14730729482784075 1.0 ['ENSG00000105088|ENST00000264833|OLFM2'] 82115 9314 PTAVNGVKVL True NCI_RA007_Epitope_Rep4 996.5967806774798 996.59568993586 42.683 2 -0.5220763712200295 0.14730729482784075 1.0 ['nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 59603 10027 LGSELVYHRR True NCI_RA007_Epitope_Rep1 1228.66765420196 1228.66654993586 43.009 2 -0.5221024467446227 0.14730729482784075 1.0 ['ENST00000506026.1_1_5:33502626-33502971:+|nuORF'] 65189 15376 LSDVRDTLI True PC9_epitope_Rep4 1030.56587447202 1030.56476993586 67.076 2 -0.5221723978494739 0.14732128211016698 1.0 ['nc|ENSG00000141576|Q96PX1-2|RNF157', 'ENSG00000141576|ENST00000269391|RNF157'] 104825 6978 STDYHISL True H1975_Epitope_Rep2 934.43961132974 934.43850993586 31.762 2 -0.5222603840851349 0.1473680757180585 1.0 ['ENST00000513131.1_1_5:38462968-38464085:+|nuORF', 'nc|ENSG00000164318|Q63HQ2-5|EGFLAM', 'nc|ENSG00000164318|Q63HQ2-3|EGFLAM', 'nc|ENSG00000164318|Q63HQ2-4|EGFLAM', 'ENSG00000164318|ENST00000322350|EGFLAM', 'nc|ENSG00000164318|Q63HQ2|EGFLAM'] 78465 16417 PDASLFDAVYS True H1975_Epitope_Rep1 1183.5397192938299 1183.5386299358602 68.509 2 -0.5223107783685355 0.14738206154451808 1.0 ['ENSG00000106617|ENST00000287878|PRKAG2', 'nc|ENSG00000106617|Q9UGJ0-2|PRKAG2', 'nc|ENSG00000106617|Q9UGJ0-3|PRKAG2', 'ENST00000488258.5_1_7:151265789-151372578:-|nuORF'] 62577 14054 LLTYNWAPDL True PC9_epitope_Rep1 1204.6128246644398 1204.61116490379 58.897 3 -0.5223195017137979 0.1473960469121627 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2'] 12374 6929 DKAAVVKFHP True H1975_Epitope_Rep3 1110.61857875122 1110.61748993586 31.613 2 -0.522352400822434 0.1474264344060624 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 79509 12955 PGQLKILTG True PC9_epitope_Rep3 925.55966689277 925.55856993586 54.854 2 -0.522384241032569 0.14743800026243276 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 28993 10000 FTIAAKHHIT True NCI_RA007_Epitope_Rep4 1137.62947778809 1137.62782490379 45.309 3 -0.5223872636449016 0.14743800026243276 1.0 ['ENSG00000125814|ENST00000377026|NAPB', 'nc|ENSG00000125814|Q9H115-2|NAPB', 'nc|ENSG00000125814|Q9H115-3|NAPB'] 5736 5627 APDEKYVAA True PC9_epitope_Rep2 962.4709114580199 962.46980993586 27.029 2 -0.5224061463765713 0.14744956536001314 1.0 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 59716 18450 LGVAYFDSSFD True PC9_epitope_Rep5 1219.53971929383 1219.53808490379 75.989 3 -0.5224063758177431 0.14744956536001314 1.0 ['ENST00000547851.1_1_12:47610056-47610092:-|nuORF'] 105206 7653 STPSKALK True H1975_Epitope_Rep3 830.48616759934 830.48506993586 34.42 2 -0.5224544312705105 0.147479949484181 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 1647 9329 AEGAVRRWQLW True H1975_Epitope_Rep1 1370.7207524039798 1370.7196499358602 40.791 2 -0.5225145712801035 0.14749393164075314 1.0 ['ENST00000203630.9_2_12:6861510-6862293:-|nuORF'] 3537 8873 AGLYECVA True NCI_RA007_Epitope_Rep2 824.3738402690399 824.3732949679301 39.158 1 -0.5225500800709344 0.1475079133386909 1.0 ['ENSG00000144619|ENST00000418658|CNTN4', 'ENST00000438282.6_1_3:2613181-3030164:+|nuORF', 'ENST00000430505.6_1_3:2613181-3079017:+|nuORF'] 110209 4508 TIDWRDIVR True NCI_RA007_Epitope_Rep4 1172.6302060640799 1172.62855490379 23.731 3 -0.5225546771783043 0.14752189457801687 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'ENST00000546884.1_1_12:56474084-56480451:+|nuORF', 'nc|ENSG00000065361|P21860-3|ERBB3', 'ENST00000549472.1_1_12:56480319-56481575:+|nuORF'] 15626 5979 EAVSTPSAAFP True H1975_Epitope_Rep3 1075.51858992643 1075.51748993586 28.009 2 -0.5226837893107229 0.14755899571983797 1.0 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF', 'nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 85960 17685 QPFASFKTI True PC9_epitope_Rep2 1037.5545815123298 1037.5534899358602 73.307 2 -0.5227050536562616 0.14755899571983797 1.0 ['ENST00000370920.7_1_1:71530480-71530570:-|nuORF'] 117735 12873 VALFQQLATA True PC9_epitope_Rep5 1060.59169529704 1060.5905899358602 54.526 2 -0.5227092199080653 0.14755899571983797 1.0 ['ENSG00000049239|ENST00000377403|H6PD', 'nc|ENSG00000049239|O95479-2|H6PD'] 2985 12365 AFLSLNIAV True NCI_RA007_Epitope_Rep4 946.5487678559 946.54766993586 54.559 2 -0.5227129444537043 0.14755899571983797 1.0 ['ENSG00000149516|ENST00000278865|MS4A3', 'nc|ENSG00000149516|Q96HJ5-3|MS4A3', 'nc|ENSG00000149516|Q96HJ5-2|MS4A3'] 4689 16398 ALDGSLSLFSL True PC9_epitope_Rep3 1121.59684024713 1121.59574993586 68.212 2 -0.5227159610567881 0.14755899571983797 1.0 ['ENST00000381440.4_1_16:19128639-19128831:+|nuORF'] 105071 3593 STKSHWASII True NCI_RA007_Epitope_Rep4 1128.5927579262 1128.59110490379 19.866 3 -0.5227498634812766 0.14756813485946674 1.0 ['nc|ENSG00000188707|Q96FA7|ZBED10P'] 138650 22525 YRRRLWKWWKS True NCI_RA007_Epitope_Rep2 1663.9211835460299 1663.92008993586 93.676 2 -0.5227719008495986 0.14756813485946674 1.0 ['ENST00000461642.2_1_20:25470551-25477423:-|nuORF'] 92372 22921 RQQIFLRV True PC9_epitope_Rep1 1058.6348975217 1058.6338099358602 92.964 2 -0.5227748005939679 0.14756813485946674 1.0 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'ENST00000469803.1_1_4:38051397-38056602:+|nuORF'] 129126 9824 VTDAAVLNN True PC9_epitope_Rep1 915.46616043075 915.46506993586 42.649 2 -0.5228449198114066 0.1475821130478986 1.0 ['nc|ENSG00000162419|Q9Y692|GMEB1', 'ENSG00000162419|ENST00000373816|GMEB1'] 95047 4782 RYRPDSLDGP True H1975_Epitope_Rep3 1174.5730851107799 1174.57198993586 23.52 2 -0.5228655330614024 0.1475936705747315 1.0 ['ENSG00000197299|ENST00000355112|BLM', 'BLM|p.N515Mfs*16|1|0.25|ENSG00000197299|chr15:90760909-90760909|A/-|frameshift_variant'] 125827 8093 VNLYMNDHRPK True NCI_RA007_Epitope_Rep1 1385.68740367037 1385.6863099358602 35.478 2 -0.5228740776076816 0.1475936705747315 1.0 ['nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 101344 15938 SLYYDYEPPYY True H1975_Epitope_Rep2 1471.61836353735 1471.6172699358601 66.504 2 -0.5229514266103745 0.1476216242805844 1.0 ['COL11A2|p.P897Lfs*87|1|0.39|ENSG00000204248|chr6:33173394-33173394|G/-|frameshift_variant', 'nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'COL11A2|p.I1056Lfs*289|1|0.19|ENSG00000204248|chr6:33171560-33171560|G/-|frameshift_variant'] 81106 4857 PPGPGGGTL True NCI_RA007_Epitope_Rep3 751.38645355807 751.38534993586 26.09 2 -0.5229682068792023 0.1476216242805844 1.0 ['ENST00000430109.1_1_1:1369598-1369895:-|nuORF'] 46892 15199 IVIIEHKSI True PC9_epitope_Rep5 1050.6437308699 1050.6426299358602 63.469 2 -0.5230435419099582 0.14763317975372608 1.0 ['nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'nc|ENSG00000103342|P15170|GSPT1', 'ENSG00000189369|ENST00000340438|GSPT2'] 16799 6296 EFKLKKMWKSP True PC9_epitope_Rep1 1420.7900778337598 1420.78843490379 29.03 3 -0.5230440795432295 0.14763317975372608 1.0 ['nc|ENSG00000182054|P48735-2|IDH2', 'ENSG00000182054|ENST00000330062|IDH2'] 79152 7923 PGASQLASGP True PC9_epitope_Rep1 883.4399456829099 883.4393949679301 35.3 1 -0.5231001469339783 0.14764473446902002 1.0 ['ENST00000272983.12_1_2:242089191-242089476:+|nuORF'] 52961 17802 KRLYYREKKYK True H1975_Epitope_Rep1 1573.90928144965 1573.90818993586 74.122 2 -0.5231008217817485 0.14764473446902002 1.0 ['nc|ENSG00000135124|Q99571-2|P2RX4', 'ENST00000499638.6_1_12:121661214-121671021:+|nuORF', 'ENST00000543318.5_1_12:121659934-121671349:+|nuORF', 'nc|ENSG00000135124|Q99571-3|P2RX4', 'ENSG00000135124|ENST00000337233|P2RX4'] 62019 18241 LLLSVQFQY True PC9_epitope_Rep4 1109.61209638845 1109.61098993586 78.233 2 -0.5231493465645044 0.14767510493179434 1.0 ['ENST00000339362.9_1_15:73595766-73595847:+|nuORF'] 92252 7458 RQKQYRWMEWN True NCI_RA007_Epitope_Rep1 1623.7728646298297 1623.77122490379 33.006 3 -0.5231593789181754 0.14768665770403647 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 30148 13683 FYRGEFRWLWR True PC9_epitope_Rep1 1614.8208007984197 1614.8191649037901 57.485 3 -0.5231682313812207 0.14768665770403647 1.0 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 11113 8660 DEEDRRYFKQQ True H1975_Epitope_Rep3 1512.6957194246 1512.6946299358601 38.307 2 -0.5231720938431623 0.14769578831745825 1.0 ['ENSG00000122958|ENST00000263559|VPS26A', 'RBM25-VPS26A|2|fusion'] 55860 10791 LDFHFNWKIWP True H1975_Epitope_Rep3 1501.7506555499297 1501.7495499358602 46.589 2 -0.5231729920386918 0.14769578831745825 1.0 ['ENST00000540171.2_1_14:105147650-105150445:+|nuORF'] 20094 6863 ENIDVCENCH True H1975_Epitope_Rep3 1174.4383080837401 1174.4372099358602 31.356 2 -0.5231737982565845 0.14769578831745825 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF', 'ENST00000476457.5_1_1:32739930-32740685:+|nuORF'] 23020 5785 EVKDVQLHLER True NCI_RA007_Epitope_Rep5 1364.7412130650398 1364.7395549037901 28.939 3 -0.5232404798535365 0.1477097609757697 1.0 ['nc|ENSG00000120656|Q16514-2|TAF12', 'ENST00000471683.5_1_1:28916264-28944539:-|nuORF', 'ENSG00000120656|ENST00000373824|TAF12'] 3660 8976 AGRASYRPPTP True PC9_epitope_Rep2 1171.6098049726697 1171.60816490379 39.881 3 -0.5233270108403952 0.14771646831251434 1.0 ['ENST00000606645.1_1_1:2477953-2478280:+|nuORF'] 125256 12264 VLRGSRAFVV True PC9_epitope_Rep2 1102.66111226954 1102.6600099358602 52.484 2 -0.5233337563392239 0.14771646831251434 1.0 ['ENST00000299563.4_1_11:74547841-74547952:+|nuORF'] 76996 9862 NVSVVDLTC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep1 1161.58120754576 1161.58010993586 42.364 2 -0.5233352216805045 0.14771646831251434 1.0 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 15039 6483 EAAEALLNMD True NCI_RA007_Epitope_Rep2 1075.48557554599 1075.48446993586 29.827 2 -0.523356627606009 0.14771646831251434 1.0 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 38681 10618 HHRVTVLQAT True PC9_epitope_Rep6 1160.64143945412 1160.64034993586 51.66 2 -0.5234183819895989 0.14774683212301035 1.0 ['ENST00000503808.5_1_4:57204874-57250274:-|nuORF', 'nc|ENSG00000157426|Q4L235-4|AASDH', 'AASDH|p.L440Wfs*43|1|0.53|ENSG00000157426|chr4:56354103-56354103|A/-|frameshift_variant', 'nc|ENSG00000157426|Q4L235-3|AASDH', 'nc|ENSG00000157426|Q4L235-2|AASDH', 'ENSG00000157426|ENST00000205214|AASDH', 'ENST00000514745.5_1_4:57219701-57248665:-|nuORF'] 69576 6629 LVTTGVLK True NCI_RA007_Epitope_Rep5 829.52730413533 829.52620993586 32.163 2 -0.5235481036119132 0.14782637204117763 1.0 ['nc|ENSG00000189060|P07305-2|H1-0', 'ENSG00000189060|ENST00000340857|H1-0'] 125551 16130 VLWWIGIL True PC9_epitope_Rep4 998.5953241254998 998.59422993586 69.983 2 -0.5235692570702283 0.14784034095565937 1.0 ['ENSG00000164535|ENST00000297056|DAGLB', 'nc|ENSG00000164535|Q8NCG7-3|DAGLB', 'nc|ENSG00000164535|Q8NCG7-4|DAGLB'] 73209 11040 NEFSDIIK True H1975_Epitope_Rep1 964.48656152216 964.48546993586 47.428 2 -0.5236166035111248 0.1478610063923947 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 45769 3618 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 18.933 2 -0.5236343121256266 0.1478610063923947 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 98127 10440 SIASEVIARPA True NCI_RA007_Epitope_Rep1 1112.61897267404 1112.6178699358602 44.592 2 -0.5236577583045133 0.1478610063923947 1.0 ['nc|ENSG00000136108|Q8WWK9-6|CKAP2', 'ENSG00000136108|ENST00000258607|CKAP2', 'nc|ENSG00000136108|Q8WWK9|CKAP2', 'nc|ENSG00000136108|Q8WWK9-4|CKAP2'] 46092 16547 ISYVAHPVE True PC9_epitope_Rep3 1013.5181960036098 1013.51708993586 68.786 2 -0.5236639136914456 0.1478610063923947 1.0 ['SAXO1|p.M209I|1|0.8|ENSG00000155875|chr9:18928850-18928850|C/T|missense_variant'] 100082 7649 SLKRSTIEL True NCI_RA007_Epitope_Rep3 1045.61315901761 1045.61206993586 37.211 2 -0.52367750690086 0.1478610063923947 1.0 ['ENST00000508743.1_1_17:46969858-46986323:-|nuORF'] 105209 8708 STPVWSLQRPP True H1975_Epitope_Rep1 1266.67207087606 1266.67096993586 38.421 2 -0.5237485876116966 0.14790775433938141 1.0 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-5|CCDC14', 'nc|ENSG00000175455|Q49A88-4|CCDC14', 'ENST00000495381.5_1_3:123633936-123674711:-|nuORF'] 138605 17095 YRQRCWRLWMR True NCI_RA007_Epitope_Rep5 1652.8292743904797 1652.8281699358602 72.527 2 -0.5238750690863332 0.14791687153767988 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|452|3|anti-sense'] 100453 19162 SLPFRDQVILL True PC9_epitope_Rep3 1299.7550722240298 1299.75343490379 78.926 3 -0.5238888318472045 0.14791687153767988 1.0 ['nc|ENSG00000278570|Q9Y5X4-2|NR2E3', 'ENSG00000278570|ENST00000617575|NR2E3'] 78502 5741 PDGRCFCHAW True NCI_RA007_Epitope_Rep2 1190.4749683759799 1190.4738699358602 26.948 2 -0.5238936762206557 0.14791687153767988 1.0 ['nc|ENSG00000050628|P43115-7|PTGER3', 'nc|ENSG00000050628|P43115-10|PTGER3'] 69786 24088 LWRKFARLAC True PC9_epitope_Rep4 1262.70701691614 1262.70647496793 101.16 1 -0.5239723068356535 0.14795634075190928 1.0 ['ENSG00000188869|ENST00000359440|TMC3', 'nc|ENSG00000188869|Q7Z5M5-2|TMC3', 'ENST00000559982.1_1_15:81630174-81666445:-|nuORF', 'TMC3|p.N768Kfs*17|1|0.27|ENSG00000188869|chr15:81334875-81334875|G/-|frameshift_variant'] 72554 15037 MVIMDWEE True PC9_epitope_Rep5 1051.43545454943 1051.4343499358602 62.844 2 -0.5239822024625725 0.14795634075190928 1.0 ['nc|ENSG00000184647|Q6UWB4-2|PRSS55', 'ENSG00000184647|ENST00000328655|PRSS55'] 45446 16666 ISEDLALIY True H1975_Epitope_Rep2 1035.54882742555 1035.54827496793 69.339 1 -0.5240051277578359 0.14795634075190928 1.0 ['ENST00000332211.10_2_10:76990718-76990862:+|nuORF'] 124285 11744 VLDENDNSPK True H1975_Epitope_Rep2 1129.52513185885 1129.5240299358602 50.248 2 -0.5240214784837949 0.14795634075190928 1.0 ['nc|ENSG00000184226|Q9HC56-2|PCDH9', 'ENSG00000184226|ENST00000377865|PCDH9'] 64238 16682 LQKNSQLLY True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 69.413 2 -0.5240416323044637 0.14797030433143774 1.0 ['ENST00000521104.1_1_6:56557688-56557817:-|nuORF'] 52276 15060 KNVKAFYRRAQ True NCI_RA007_Epitope_Rep1 1379.77860163327 1379.77750993586 62.648 2 -0.5241145502198514 0.14801219232407983 1.0 ['ENSG00000025772|ENST00000372813|TOMM34'] 137389 20794 YLLDQWVFGT True PC9_epitope_Rep6 1240.6128246644398 1240.61172993586 92.752 2 -0.5241188622071346 0.14801219232407983 1.0 ['nc|ENSG00000179934|P51685-2|CCR8', 'ENSG00000179934|ENST00000326306|CCR8'] 45759 4155 ISNIEDLPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 21.08 2 -0.5241243813455302 0.14801219232407983 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 74939 5569 NLTKSLLNI True NCI_RA007_Epitope_Rep5 1014.6073453611799 1014.60624993586 28.106 2 -0.5244003896954922 0.14812447765596579 1.0 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-5|CCDC14'] 101948 16001 SPLSSPLAQA True PC9_epitope_Rep2 969.5131106231698 969.51200993586 66.804 2 -0.5244619867592757 0.14817121132669114 1.0 ['ENST00000394540.3_1_11:64010007-64010954:+|nuORF', 'ENST00000541388.1_1_11:64010007-64011498:+|nuORF'] 943 12335 ADTYWCGIEK True H1975_Epitope_Rep1 1184.5172100274397 1184.5161099358602 52.476 2 -0.5245839651784566 0.14828349037279803 1.0 ['nc|ENSG00000186074|Q8TDQ1-5|CD300LF', 'ENST00000583544.1_1_17:72700560-72709059:-|nuORF', 'nc|ENSG00000186074|Q8TDQ1-3|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-4|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-2|CD300LF', 'ENSG00000186074|ENST00000326165|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-6|CD300LF'] 63602 13902 LPLPPPQLSI True NCI_RA007_Epitope_Rep3 1073.6484818971699 1073.64738993586 62.002 2 -0.5246003667440351 0.14829744698980762 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 31431 4495 GEDPRTYPK True H1975_Epitope_Rep2 1061.51417325233 1061.5130699358601 22.402 2 -0.5246994633994174 0.1483581306941076 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 108580 13425 TEIANLLKE True H1975_Epitope_Rep3 1029.57062549929 1029.57007496793 56.909 1 -0.524725436005155 0.1483581306941076 1.0 ['ENSG00000170345|ENST00000303562|FOS', 'nc|ENSG00000170345|P01100-3|FOS', 'nc|ENSG00000170345|P01100-2|FOS'] 99704 14953 SLGERINTL True PC9_epitope_Rep1 1001.55055876105 1001.54946993586 62.339 2 -0.524792106581586 0.14837208540202199 1.0 ['ENSG00000171303|ENST00000302909|KCNK3'] 112415 11795 TNHSYITI True PC9_epitope_Rep5 947.47124581119 947.47014993586 50.367 2 -0.5248010694512066 0.14838603965262986 1.0 ['ENST00000418303.1_1_7:43958366-43959461:+|nuORF'] 45706 8247 ISLNEDLRS True PC9_epitope_Rep3 1045.54038800017 1045.53928993586 36.699 2 -0.5248458605924298 0.14841637856171455 1.0 ['ENSG00000204642|ENST00000259951|HLA-F', 'ENST00000484704.5_1_6:29691969-29693843:+|nuORF', 'nc|ENSG00000204642|P30511-2|HLA-F', 'nc|ENSG00000204642|P30511|HLA-F'] 15529 6198 EARSEILA True H1975_Epitope_Rep2 887.4712458111899 887.47014993586 28.812 2 -0.5249493208115669 0.14847705339734243 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant', 'ENSG00000135631|ENST00000486777|RAB11FIP5'] 13396 9020 DNIQTVKRLRT True PC9_epitope_Rep4 1342.7680965192199 1342.76698993586 42.267 2 -0.5249578127782494 0.14847705339734243 1.0 66082 16424 LSNLSSTSHVP True PC9_epitope_Rep1 1140.5775017848803 1140.57640993586 67.998 2 -0.5250107382746517 0.14849100501359896 1.0 ['ENSG00000169710|ENST00000306749|FASN'] 36968 21909 GVRKEWSL True PC9_epitope_Rep3 973.5345147740899 973.53340993586 89.577 2 -0.5250405370249668 0.1485049561726878 1.0 ['ENST00000523135.1_1_5:179680521-179691830:-|nuORF'] 68234 8378 LTQTTHTDK True NCI_RA007_Epitope_Rep2 1043.52473793603 1043.52364993586 37.229 2 -0.525118795961634 0.14853529064814208 1.0 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67'] 39994 8479 HQRWRNWQRRK True NCI_RA007_Epitope_Rep1 1649.8875920019698 1649.8859549037902 36.981 3 -0.5251770702263789 0.1485468069071726 1.0 ['ENST00000291074.9_2_17:505039-505090:-|nuORF'] 18535 6746 EKRRKEERCKK True H1975_Epitope_Rep1 1488.8307138591197 1488.82906490379 30.989 3 -0.5251827359708308 0.1485468069071726 1.0 ['ENST00000413731.1_1_17:16649540-16650074:-|nuORF'] 57254 10418 LEFVEDFI True H1975_Epitope_Rep2 1010.4960635766998 1010.49496993586 45.086 2 -0.5252121766681188 0.1485583224115334 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'ENST00000473375.1_1_3:180669142-180671642:+|nuORF'] 79068 22861 PFSRHGLR True H1975_Epitope_Rep3 968.5304324531598 968.52932993586 95.504 2 -0.525226132399164 0.1485583224115334 1.0 ['ENSG00000161179|ENST00000292778|YDJC'] 5143 11033 ALNKDFLP True NCI_RA007_Epitope_Rep1 916.5018176634799 916.50072993586 46.912 2 -0.5253597623723555 0.14863536581370204 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 18189 11572 EIQPRHWDPNL True PC9_epitope_Rep3 1403.6945972257897 1403.6929649037902 49.527 3 -0.5253622433736939 0.14863536581370204 1.0 ['ENST00000437621.6_1_7:1624674-1624941:+|nuORF'] 103083 10877 SQLKKFYNQ True PC9_epitope_Rep1 1154.6084079903399 1154.60730993586 46.723 2 -0.5254444949439765 0.14867964091475003 1.0 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.H695Tfs*6|1|0.19|ENSG00000151655|chr10:7738744-7738745|-/A|frameshift_variant', 'ITIH2|p.T482M|1|0.08|ENSG00000151655|chr10:7730117-7730117|C/T|missense_variant'] 134498 6252 WVASSELTSY True H1975_Epitope_Rep3 1141.52915461013 1141.52804993586 29.06 2 -0.5254502950092743 0.14867964091475003 1.0 ['ENSG00000115084|ENST00000245680|SLC35F5', 'nc|ENSG00000115084|Q8WV83-2|SLC35F5', 'ENST00000498768.1_1_2:114500256-114514010:-|nuORF', 'SLC35F5|p.I82V|1|0.17|ENSG00000115084|chr2:113755194-113755194|T/C|missense_variant'] 10704 6136 C[Carbamidomethyl]STPTWHMYTY True H1975_Epitope_Rep2 1445.57440791316 1445.5733099358602 28.579 2 -0.5255263824644932 0.1486935866983373 1.0 ['L1PA6_dup2721|chr7:23261331-23261795:+|2.0235021599267444|0.2438478610544489|3.05|502.0|10|2|sense', 'chr10:4960235-4998625|163|209.52|0.13|10.65|-|2|TE_info:L1PA4,L1PA4_dup8212,L1,LINE,acceptor,-,4959925,4960235|None,AKR1C2|3'] 15085 10541 EACLQGNLIA True H1975_Epitope_Rep2 1030.5117307241799 1030.5106299358602 45.568 2 -0.5256634962891672 0.14872147689485152 1.0 ['ENSG00000141564|ENST00000306801|RPTOR', 'ENST00000577161.5_1_17:78519375-78883449:+|nuORF', 'RPTOR-STXBP4|1|fusion'] 62196 7159 LLPPGNKA True PC9_epitope_Rep2 808.48068829608 808.47958993586 32.93 2 -0.5257172294768475 0.14872147689485152 1.0 ['ENST00000263464.7_1_11:102193411-102193507:+|nuORF'] 82454 11191 PVDNLVIK True NCI_RA007_Epitope_Rep1 896.53311779176 896.53256496793 47.531 1 -0.5257418821117966 0.14873542130782336 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 70725 10534 MDYDSYQHYFY True H1975_Epitope_Rep3 1530.5761814555403 1530.57454490379 45.586 3 -0.5258263053859992 0.148782125833347 1.0 ['ENSG00000116990|ENST00000372816|MYCL', 'nc|ENSG00000116990|P12524-3|MYCL', 'nc|ENSG00000116990|P12524-2|MYCL'] 11410 14089 DFLIRHHGPK True NCI_RA007_Epitope_Rep2 1218.6621748987002 1218.66106993586 59.464 2 -0.5258532140051559 0.1487936315539467 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 7771 3363 ASVLDALDPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 17.654 2 -0.5258677686664878 0.1487936315539467 1.0 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 37685 13072 HALLIKDVP True H1975_Epitope_Rep2 1004.60186605792 1004.60076993586 55.404 2 -0.525948725645647 0.14882395335124157 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 6471 6948 APTAITEA True PC9_epitope_Rep6 772.3966838886 772.39558993586 35.671 2 -0.5260039848184935 0.14883545713630555 1.0 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 18679 10946 ELDACSFKP True PC9_epitope_Rep3 1008.45863252216 1008.45752993586 47.085 2 -0.5260160633946508 0.14883545713630555 1.0 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS', 'EYS|p.Q212K|2|0.54|ENSG00000188107|chr6:65494777-65494777|G/T|missense_variant', 'EYS|p.A295Qfs*44|1|0.33|ENSG00000188107|chr6:65405348-65405348|T/-|frameshift_variant', 'nc|ENSG00000188107|Q5T1H1-2|EYS', 'nc|ENSG00000188107|Q5T1H1-4|EYS'] 139117 6667 YSPSNGPP True NCI_RA007_Epitope_Rep5 817.3606327330499 817.35952993586 32.313 2 -0.5260660378373604 0.14885846244554357 1.0 ['nc|ENSG00000129993|O75081-2|CBFA2T3', 'nc|ENSG00000129993|O75081-4|CBFA2T3', 'ENSG00000129993|ENST00000268679|CBFA2T3'] 25097 14353 FDIRRCWAR True H1975_Epitope_Rep2 1221.61893018773 1221.61729490379 60.358 3 -0.5260855569594618 0.14885846244554357 1.0 ['ENST00000569299.1_1_16:66968069-66968324:-|nuORF'] 2319 3959 AEQAERYDEM-[Oxidation] True H1975_Epitope_Rep2 1256.49793151528 1256.4968299358602 20.295 2 -0.5261386445046922 0.14885846244554357 1.0 ['ENSG00000108953|ENST00000264335|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 35813 6960 GTYGQVYKAK True NCI_RA007_Epitope_Rep5 1113.5818588893296 1113.5807699358602 33.456 2 -0.5261627546727022 0.14885846244554357 1.0 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 136304 10118 YGVRMTAM True PC9_epitope_Rep3 927.43064395251 927.42954993586 43.869 2 -0.5262653940620233 0.14893791251085017 1.0 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-5|ERC1', 'ERC1|p.T150Nfs*16|1|0.3|ENSG00000082805|chr12:1028349-1028350|AC/-|frameshift_variant'] 86420 12753 QQPRTPILL True PC9_epitope_Rep4 1064.6342288153598 1064.63312993586 56.915 2 -0.5263138749001685 0.14895185063871602 1.0 ['ENSG00000113083|ENST00000231004|LOX'] 62146 12199 LLPELGVVK True NCI_RA007_Epitope_Rep1 966.6113681124599 966.61026993586 51.419 2 -0.5263617647153764 0.14896334872752284 1.0 ['ENST00000597423.1_1_19:59058531-59059226:+|nuORF'] 113542 19941 TQVEGLTVV True PC9_epitope_Rep2 944.5178616504398 944.51731496793 82.1 1 -0.5263714401522538 0.14896334872752284 1.0 ['nc|ENSG00000196188|P14091-3|CTSE'] 134031 22774 WQCDYDNDCGD True NCI_RA007_Epitope_Rep5 1332.4023164978398 1332.4006649037901 94.807 3 -0.526427765238557 0.14897728575405728 1.0 ['ENSG00000123384|ENST00000243077|LRP1'] 99663 3487 SLGANPRRTPQ True NCI_RA007_Epitope_Rep5 1195.64216773011 1195.64053490379 19.22 3 -0.5264786006469807 0.14899122232411896 1.0 ['nc|ENSG00000204410|O43196-4|MSH5', 'ENSG00000204410|ENST00000375750|MSH5', 'nc|ENSG00000204410|O43196-2|MSH5', 'nc|ENSG00000204410|O43196-3|MSH5', 'ENST00000463094.5_1_6:31708243-31711078:+|nuORF', 'ENST00000482280.1_1_6:31708243-31713997:+|nuORF'] 11106 9136 DEDNRRWMREN True NCI_RA007_Epitope_Rep5 1519.6586227232299 1519.65752993586 41.791 2 -0.52648267488725 0.1490051584377303 1.0 ['nc|ENSG00000185437|P55822|SH3BGR', 'ENSG00000185437|ENST00000333634|SH3BGR'] 26283 17463 FIDDANYSV True PC9_epitope_Rep4 1042.4607406971402 1042.46017496793 75.169 1 -0.5264982614734026 0.1490190940949137 1.0 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 7767 6366 ASVKTAFTRK True NCI_RA007_Epitope_Rep1 1107.64004247179 1107.6389499358602 28.79 2 -0.5265551115549341 0.14905845750777796 1.0 ['ENST00000462572.1_1_7:143479852-143480367:+|nuORF'] 123678 19277 VINVEFPVI True PC9_epitope_Rep1 1028.5906326678798 1028.5895299358601 78.951 2 -0.5265981324164741 0.14905845750777796 1.0 ['CLSTN2|p.V466I|1|0.11|ENSG00000158258|chr3:140532375-140532375|G/A|missense_variant'] 80312 14201 PLEWIGLI True PC9_epitope_Rep1 939.5429541994698 939.54184993586 59.446 2 -0.526614873786199 0.14905845750777796 1.0 ['PRDM13|p.G487Afs*4|1|0.22|ENSG00000112238|chr6:99614094-99614094|G/-|frameshift_variant', 'ENSG00000112238|ENST00000369215|PRDM13'] 42982 13729 IGDHQYTI True PC9_epitope_Rep6 945.4555957470501 945.45448993586 64.597 2 -0.5266273127380141 0.14905845750777796 1.0 ['ENSG00000145087|ENST00000471454|STXBP5L', 'nc|ENSG00000145087|Q9Y2K9|STXBP5L'] 134795 23804 WYKVILSILVP True PC9_epitope_Rep3 1329.80604516773 1329.8049499358601 96.849 2 -0.5266438369437683 0.14907239115128293 1.0 ['ENSG00000092439|ENST00000646667|TRPM7'] 35245 5535 GSIVNFSQDP True H1975_Epitope_Rep3 1062.4981888350198 1062.49708993586 26.339 2 -0.5266611734214058 0.14907900122799836 1.0 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 20062 15792 ENEEEKKML True NCI_RA007_Epitope_Rep5 1148.5383393948398 1148.53724993586 67.464 2 -0.5266995185372692 0.14907900122799836 1.0 ['ENSG00000170776|ENST00000394518|AKAP13', 'nc|ENSG00000170776|Q12802-4|AKAP13', 'nc|ENSG00000170776|Q12802-2|AKAP13'] 16447 5608 EELNTDLYHMK True H1975_Epitope_Rep1 1391.63911606527 1391.63746490379 26.639 3 -0.5267068000083408 0.14907900122799836 1.0 ['nc|ENSG00000291004|A6NC78|GOLGA8IP', 'ENSG00000179938|ENST00000567927|GOLGA8J', 'ENSG00000188626|ENST00000563027|GOLGA8M', 'ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'nc|ENSG00000261480|H3BSY2-2|GOLGA8M'] 95796 5361 SDEDRISEVR True NCI_RA007_Epitope_Rep1 1204.56839365316 1204.5667349037901 24.932 3 -0.526723180829843 0.14907900122799836 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1', 'nc|ENSG00000159082|O43426-5|SYNJ1'] 123716 8513 VIQEKEKKGKE True NCI_RA007_Epitope_Rep2 1314.7507151195798 1314.74960993586 37.759 2 -0.5268063292985831 0.14908805134418285 1.0 ['ENSG00000089048|ENST00000617257|ESF1'] 76924 12503 NVLVQKANKFT True H1975_Epitope_Rep1 1260.7190210684798 1260.7179299358602 53.134 2 -0.5268508546647851 0.14908805134418285 1.0 ['ENST00000416579.5_1_2:73200539-73298852:-|nuORF', 'ENSG00000144040|ENST00000272433|SFXN5', 'ENST00000474528.5_1_2:73172153-73286292:-|nuORF'] 84305 5843 QFFDEMADP True H1975_Epitope_Rep2 1098.4328116971399 1098.43170993586 27.463 2 -0.5268821650828373 0.14908805134418285 1.0 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1'] 135663 6799 YEFYHYVKEQF True NCI_RA007_Epitope_Rep2 1551.7034305739896 1551.70232993586 31.062 2 -0.5269278843067752 0.14909954158480682 1.0 ['ENST00000466695.1_1_6:149387353-149395249:+|nuORF', 'ENSG00000111962|ENST00000367463|UST'] 84154 8209 QERFTQDTQP True H1975_Epitope_Rep2 1248.5734790335998 1248.5723899358602 36.529 2 -0.5269290053573725 0.14909954158480682 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 78075 9753 PALRSDEL True PC9_epitope_Rep1 899.4712458111899 899.47014993586 42.374 2 -0.5269910317349623 0.1491134722745207 1.0 ['ENST00000602755.1_1_1:109643134-109643182:+|nuORF'] 129784 22577 VTKRTRSL True PC9_epitope_Rep3 959.5876129761099 959.58650993586 92.111 2 -0.5271310786395731 0.14916014537834388 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 2977 11231 AFLFFGPC True NCI_RA007_Epitope_Rep4 900.4203965386398 900.41928993586 50.09 2 -0.5272024695106997 0.14920437430423678 1.0 ['OR4K2|p.V247A|2|0.06|ENSG00000165762|chr14:19877007-19877007|T/C|missense_variant'] 130658 8849 VVAVLLNNK True NCI_RA007_Epitope_Rep1 968.6018660579201 968.60076993586 38.421 2 -0.527238291255492 0.14920437430423678 1.0 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 100221 19902 SLLMSIHNI True PC9_epitope_Rep3 1026.55320161334 1026.55210993586 81.794 2 -0.5272520187051023 0.1492183023655562 1.0 ['nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 99464 5990 SLELLSSRDP True H1975_Epitope_Rep3 1115.58225281215 1115.5811499358601 28.053 2 -0.5273669517579299 0.14923222997086075 1.0 ['AluJr_dup30890|chr7:56010465-56010753:-|1.3064250384088274|0.4309280836060434|1.6|502.0|11|1|anti-sense'] 29012 19440 FTIRDLQRL True PC9_epitope_Rep5 1160.6665915728 1160.66494490379 79.827 3 -0.5274023405927049 0.14926252721528313 1.0 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF'] 79573 11936 PGTHYRARVEV True NCI_RA007_Epitope_Rep1 1283.6734678583898 1283.6723699358602 50.414 2 -0.5274105709880005 0.1492642364919058 1.0 ['ENSG00000275793|ENST00000619918|RIMBP3'] 138146 17436 YQLKGRKCM True PC9_epitope_Rep4 1125.57870516853 1125.5776099358602 75.061 2 -0.5274358232450906 0.1492642364919058 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant'] 138506 19892 YRIREFRQTFR True PC9_epitope_Rep5 1570.84807817542 1570.84642490379 81.566 3 -0.5274690417051685 0.1492642364919058 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 102004 11874 SPPELQGL True PC9_epitope_Rep4 839.4388830537498 839.43778993586 53.447 2 -0.5274920517885123 0.1492642364919058 1.0 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1'] 140299 8229 YYDPHQATF True NCI_RA007_Epitope_Rep3 1140.48762415132 1140.48652993586 39.504 2 -0.5274958764637707 0.1492642364919058 1.0 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1', 'PCNX1|p.S602Vfs*6|1|0.21|ENSG00000100731|chr14:70978141-70978144|TCTA/-|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-2|PCNX1', 'ENST00000554879.5_1_14:71374480-71476401:+|nuORF'] 121923 11622 VGPPLAETVF True NCI_RA007_Epitope_Rep3 1028.55424715916 1028.5531499358601 52.836 2 -0.5275337439460208 0.1492642364919058 1.0 ['ENSG00000153201|ENST00000283195|RANBP2', 'RANBP2|p.T1396I|1|0.27|ENSG00000153201|chr2:108764726-108764726|C/T|missense_variant'] 3373 19780 AGILPVMQ True PC9_epitope_Rep5 827.4575103233501 827.45640993586 81.129 2 -0.5275751708357739 0.14927816152158968 1.0 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000494046.5_1_9:139914760-139922592:-|nuORF', 'ENST00000492260.5_1_9:139917391-139922592:-|nuORF', 'ENST00000398207.8_1_9:139916273-139923324:-|nuORF', 'ENST00000476211.5_1_9:139916273-139923324:-|nuORF'] 36917 4532 GVQWCNHSSLP True H1975_Epitope_Rep2 1226.55024149122 1226.5486049037902 22.543 3 -0.5276589150144986 0.149308454046976 1.0 ['ENST00000543998.1_1_12:124181644-124189091:+|nuORF'] 44633 21451 IPIQDVAI True PC9_epitope_Rep4 867.5065686907499 867.50546993586 90.699 2 -0.527722644241333 0.1493387455807254 1.0 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3', 'nc|ENSG00000184347|O75094-2|SLIT3', 'SLIT3|p.Q1102Rfs*119|1|0.53|ENSG00000184347|chr5:168686989-168686989|G/-|frameshift_variant', 'ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2'] 45433 19911 ISDVVNYFLSV True PC9_epitope_Rep4 1254.64960409598 1254.6485099358601 84.722 2 -0.527753706655407 0.14934777983273048 1.0 ['ENST00000368468.3_1_6:119499937-119500069:-|nuORF'] 68443 8694 LTTPWRRLERP True NCI_RA007_Epitope_Rep3 1423.80481638111 1423.80316490379 41.277 3 -0.5277734853980015 0.14934777983273048 1.0 ['ENST00000354588.7_1_11:62437223-62439219:-|nuORF', 'ENST00000524759.1_1_11:62434908-62439219:-|nuORF', 'ENST00000431002.6_1_11:62438460-62439219:-|nuORF'] 18238 5901 EISDIHVTG True NCI_RA007_Epitope_Rep2 969.4767251144501 969.47562993586 27.57 2 -0.5278204526859795 0.14934777983273048 1.0 ['ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST', 'nc|ENSG00000151914|Q03001-12|DST'] 96367 11163 SEGLAQLTS True PC9_epitope_Rep1 904.45017601344 904.44906993586 47.824 2 -0.527859201382587 0.14935925762262484 1.0 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 135541 7310 YEEFWIKYAKY True H1975_Epitope_Rep3 1538.74456710998 1538.7429149037903 33.09 3 -0.5279123717279389 0.14935925762262484 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 115659 4240 TVKKNYEAL True NCI_RA007_Epitope_Rep4 1064.5866099165999 1064.58550993586 22.626 2 -0.5279879975640769 0.14937073466114592 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 124776 12322 VLKTAIIAAV True PC9_epitope_Rep1 997.6535672776098 997.65246993586 52.251 2 -0.528045250870228 0.14937073466114592 1.0 ['AOX1|p.G815A|1|0.2|ENSG00000138356|chr2:200637008-200637008|G/C|missense_variant'] 74988 7839 NLVVMFFYFVS True PC9_epitope_Rep6 1364.6838814297198 1364.68278993586 39.548 2 -0.5280831846334488 0.14938465566902331 1.0 ['ENST00000370272.8_1_1:93826667-93826868:+|nuORF'] 34533 8189 GQEELEEDDA True PC9_epitope_Rep3 1133.43604207093 1133.43494993586 36.479 2 -0.5281517679631783 0.1494149414941494 1.0 ['ENSG00000134508|ENST00000256925|CABLES1'] 115850 12644 TVNIVVTDV True PC9_epitope_Rep1 958.53351171458 958.53240993586 53.505 2 -0.5283059926290061 0.14949432134323962 1.0 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1-3|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15'] 102978 13002 SQIREMETL True PC9_epitope_Rep6 1105.54375912845 1105.5426699358602 61.592 2 -0.5283331317625352 0.14951971068091444 1.0 ['ENSG00000157456|ENST00000288207|CCNB2'] 19755 11943 ELSSLHSLLWE True NCI_RA007_Epitope_Rep1 1312.66631678928 1312.66520993586 50.441 2 -0.5283434236230196 0.14951971068091444 1.0 ['nc|ENSG00000136848|Q5VWQ8-3|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-4|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-2|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-5|DAB2IP', 'ENSG00000136848|ENST00000408936|DAB2IP'] 44559 8680 IPDHYFKG True H1975_Epitope_Rep1 975.48141657207 975.48030993586 38.318 2 -0.5283450175574528 0.14951971068091444 1.0 ['nc|ENSG00000168685|P16871-4|IL7R', 'nc|ENSG00000168685|P16871-3|IL7R', 'nc|ENSG00000168685|P16871-2|IL7R', 'ENSG00000168685|ENST00000303115|IL7R'] 13486 16261 DPEATQFIEY True H1975_Epitope_Rep2 1211.5346339133898 1211.53352993586 67.758 2 -0.5284126709144015 0.1495287341275036 1.0 ['SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A'] 52880 5471 KRFEIKHRLQC True PC9_epitope_Rep5 1456.8085218625597 1456.80688490379 26.055 3 -0.5284221521357955 0.1495287341275036 1.0 ['ENSG00000115339|ENST00000392701|GALNT3'] 117893 18417 VAPWATVGSLL True PC9_epitope_Rep4 1112.62299542532 1112.62188993586 78.909 2 -0.5284436836880114 0.1495287341275036 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant'] 45686 7687 ISLCYYYFT True NCI_RA007_Epitope_Rep1 1171.52598380599 1171.52488993586 33.894 2 -0.5285007115961834 0.14954265049989365 1.0 ['SCN2A|p.R1586C|1|0.4|ENSG00000136531|chr2:165386950-165386950|C/T|missense_variant'] 119052 7674 VEGQIGQVAE True H1975_Epitope_Rep2 1028.5138388991597 1028.51274993586 34.47 2 -0.5285903297971798 0.1495565664168603 1.0 ['ENSG00000128881|ENST00000267890|TTBK2', 'nc|ENSG00000128881|Q6IQ55-2|TTBK2'] 139407 13127 YTEEDLREKFK True NCI_RA007_Epitope_Rep1 1456.7198089141195 1456.71817490379 55.055 3 -0.5287195488825971 0.14964250069536478 1.0 ['nc|ENSG00000155636|Q8IUH3-2|RBM45', 'ENST00000424000.6_1_2:178977216-178988379:+|nuORF', 'RBM45|p.A384Lfs*7|1|0.37|ENSG00000155636|chr2:178124193-178124193|A/-|frameshift_variant', 'ENSG00000155636|ENST00000286070|RBM45', 'nc|ENSG00000155636|Q8IUH3|RBM45'] 99771 8646 SLGNMEIPV True H1975_Epitope_Rep3 958.4793679667399 958.47826993586 38.253 2 -0.5287262540013699 0.14964250069536478 1.0 ['ENST00000537296.5_1_11:18424524-18425261:+|nuORF'] 62571 17253 LLTVMPCDCYV True PC9_epitope_Rep2 1255.56508881999 1255.56398993586 71.624 2 -0.5287296071337728 0.14964250069536478 1.0 ['OR4C12|p.A117P|2|0.09|ENSG00000221954|chr11:49982153-49982153|C/G|missense_variant'] 25953 13974 FGSHPLWNSL True PC9_epitope_Rep6 1156.56654317836 1156.5654499358602 65.61 2 -0.5287384752080502 0.14964250069536478 1.0 ['ENST00000368347.8_1_1:155293877-155294000:+|nuORF'] 89534 3374 RERPPEEVAA True NCI_RA007_Epitope_Rep3 1152.58873517492 1152.5870849037901 18.837 3 -0.5287516927128862 0.14964250069536478 1.0 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 60376 26966 LIIIKDLLLLI True H1975_Epitope_Rep2 1278.8890465156999 1278.8874149037902 111.27 3 -0.5288732607933518 0.1496866870633661 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 44385 17107 INDVKELIEEK True H1975_Epitope_Rep3 1328.71874628496 1328.7176499358602 71.424 2 -0.5289236401261689 0.1496866870633661 1.0 ['ENSG00000109576|ENST00000337664|AADAT', 'nc|ENSG00000109576|Q8N5Z0-2|AADAT'] 68313 11770 LTRSFYLEPM True H1975_Epitope_Rep3 1255.62709482959 1255.6259899358602 50.417 2 -0.528987813183139 0.1497005988023952 1.0 ['ENSG00000176009|ENST00000531618|ASCL3'] 121418 4159 VGICSMAK True NCI_RA007_Epitope_Rep4 807.39828119507 807.39718993586 22.291 2 -0.5290965904007044 0.1497284209148616 1.0 ['ENSG00000145725|ENST00000358359|PPIP5K2', 'nc|ENSG00000145725|O43314-2|PPIP5K2'] 54574 17041 LACEKECLPR True PC9_epitope_Rep1 1160.56820005448 1160.5671099358601 70.374 2 -0.5290977261757048 0.1497284209148616 1.0 ['ENSG00000162591|ENST00000356575|MEGF6'] 47029 7613 IVSDQKPSVSK True H1975_Epitope_Rep1 1186.65575210558 1186.65464993586 34.272 2 -0.5291272781104773 0.14974233128834355 1.0 ['ENSG00000114857|ENST00000232978|NKTR', 'ENST00000508351.5_1_3:42675051-42676859:+|nuORF', 'ENST00000464315.1_1_3:42675165-42676228:+|nuORF'] 42214 9927 IEGRRSEACP True NCI_RA007_Epitope_Rep2 1116.53459142708 1116.5334899358602 43.24 2 -0.5291572865059527 0.14975379128699265 1.0 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 60476 17286 LILTILTNN True PC9_epitope_Rep6 1013.61209638845 1013.61098993586 79.096 2 -0.5292088558021911 0.14975379128699265 1.0 ['ENST00000398117.1_1_18:60986101-60986167:-|nuORF'] 3697 9260 AGSCSAGPR True NCI_RA007_Epitope_Rep1 804.35483615996 804.3542849679301 40.016 1 -0.5292907302087311 0.14976525053575226 1.0 ['ENST00000361906.7_1_22:38616163-38616313:-|nuORF'] 97149 18599 SFFKWKSVWWF True NCI_RA007_Epitope_Rep2 1546.7761420217796 1546.7744849037902 77.144 3 -0.5293100378823471 0.14976525053575226 1.0 ['ENST00000409535.6_1_3:51698066-51698156:+|nuORF'] 60688 19514 LIVTGPLVLI True PC9_epitope_Rep6 1036.68961843316 1036.68852993586 87.724 2 -0.5293893937913742 0.14984459348928514 1.0 ['ENST00000466502.1_1_3:142300490-142300658:+|nuORF'] 84155 8045 QERFTQDTQP True H1975_Epitope_Rep3 1248.5734790335998 1248.5723899358602 35.918 2 -0.5294105484230809 0.149856049204999 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 108838 6222 TEQVTAMLLS True H1975_Epitope_Rep2 1091.55326118299 1091.55216993586 28.897 2 -0.5294258219154855 0.149856049204999 1.0 ['ENSG00000170606|ENST00000304858|HSPA4'] 79483 21240 PGPSGAQAAV True PC9_epitope_Rep1 853.4293809992099 853.42883496793 86.523 1 -0.5295602729097033 0.14987405541561713 1.0 ['ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2'] 47003 11823 IVQCQLLMLRV True PC9_epitope_Rep3 1314.75158415006 1314.75048993586 50.494 2 -0.529582032637666 0.14987405541561713 1.0 ['ENST00000428076.1_1_13:19956755-19957193:+|nuORF', 'ENST00000435741.1_1_Y:28772724-28773147:-|nuORF'] 133505 7242 WHDAENQTV True PC9_epitope_Rep3 1098.47303671634 1098.47192993586 32.866 2 -0.5295911740446507 0.14987405541561713 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-3|NUP160', 'ENST00000527126.1_1_11:47843172-47843701:-|nuORF'] 31437 4521 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 22.511 2 -0.5296000849153629 0.14987405541561713 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 73409 16139 NESAVIVAP True PC9_epitope_Rep4 898.4759968384599 898.47544496793 70.018 1 -0.5296091445298704 0.14987405541561713 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 102296 4796 SPVEEKYEP True NCI_RA007_Epitope_Rep2 1076.50260550912 1076.5015099358602 23.286 2 -0.5296245555857043 0.14987405541561713 1.0 ['MAP1A|p.S1019Y|1|0.29|ENSG00000166963|chr15:43524529-43524529|C/A|missense_variant'] 5424 15386 ALWDWLCAIL True PC9_epitope_Rep4 1202.6158018699 1202.6147099358602 67.114 2 -0.5296784289274702 0.1499182204775924 1.0 ['ENST00000466896.5_1_7:123190633-123197498:-|nuORF', 'ENST00000491033.1_1_7:123191608-123197498:-|nuORF'] 7062 4422 AQVLHVPS True NCI_RA007_Epitope_Rep5 849.47085188837 849.46974993586 23.643 2 -0.5296887212058838 0.1499182204775924 1.0 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 123151 2725 VHEVVEKQ True H1975_Epitope_Rep2 966.5134449763398 966.51234993586 14.567 2 -0.5297552941013051 0.1499484797435436 1.0 ['ENST00000342315.8_1_12:113424985-113425036:+|nuORF'] 127790 1891 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 10.479 3 -0.5297877796191682 0.14996238265022407 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 134265 24365 WRRRRRSISR True PC9_epitope_Rep2 1427.8446645608299 1427.8435699358602 99.286 2 -0.5298128235033153 0.14998282826630907 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5'] 111985 17674 TLSNALVPG True PC9_epitope_Rep6 870.4810822188999 870.47998993586 80.62 2 -0.5298352629435182 0.14998282826630907 1.0 ['ADGRB2|p.C1012Sfs*79|1|0.17|ENSG00000121753|chr1:31736668-31736668|C/-|frameshift_variant', 'nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2'] 79248 12589 PGGLFGTSS True PC9_epitope_Rep1 821.39193286133 821.3913849679301 53.291 1 -0.529886856872767 0.14998282826630907 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 95306 6600 SAEVELQAK True NCI_RA007_Epitope_Rep5 973.5080252427299 973.50692993586 32.046 2 -0.5298904012436295 0.14998282826630907 1.0 ['ENSG00000171051|ENST00000304748|FPR1'] 98381 17383 SIHRRRTDP True H1975_Epitope_Rep2 1136.61628733544 1136.6151899358601 72.157 2 -0.529891676194836 0.14998282826630907 1.0 ['ENSG00000122728|ENST00000242310|TAF1L', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 13597 6918 DPRNRRLYWFR True NCI_RA007_Epitope_Rep2 1577.8327624644496 1577.8311149037902 31.529 3 -0.5298961556608077 0.14999182338511857 1.0 ['ENST00000408953.3_1_5:159826916-159827063:-|nuORF'] 124717 5066 VLKKKKKKKK True NCI_RA007_Epitope_Rep2 1254.92274668582 1254.9211049037901 24.331 3 -0.5299161805730306 0.14999182338511857 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 87014 8218 QSAPFQQLL True PC9_epitope_Rep4 1030.54474510462 1030.54364993586 39.069 2 -0.5299336752733569 0.14999182338511857 1.0 ['MUC17|p.V2173Wfs*20|1|0.14|ENSG00000169876|chr7:101037932-101037932|G/-|frameshift_variant'] 83369 5279 QAQYQALER True NCI_RA007_Epitope_Rep3 1105.55162139021 1105.5505299358601 27.773 2 -0.5299589079289669 0.15000327053898482 1.0 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 47130 12994 IWEEAYQR True H1975_Epitope_Rep3 1093.5192586327698 1093.5186749679299 55.215 1 -0.5299683865328577 0.15000327053898482 1.0 ['ENST00000496676.5_1_1:6272096-6272816:+|nuORF', 'ENST00000492476.1_1_1:6271125-6272816:+|nuORF', 'nc|ENSG00000158286|Q6ZRF8-4|RNF207', 'ENSG00000158286|ENST00000377939|RNF207'] 88639 8939 RARQYRSDP True NCI_RA007_Epitope_Rep3 1147.5846528539898 1147.58299490379 42.246 3 -0.530013554268797 0.1500498749039295 1.0 ['ENST00000598723.5_1_19:53210029-53217273:-|nuORF', 'ENST00000598639.5_1_19:53210029-53211464:-|nuORF', 'ENST00000597924.5_1_19:53345283-53349845:-|nuORF', 'nc|ENSG00000196417|Q7L2R6-3|ZNF765', 'ENST00000338230.3_2_19:53270898-53289983:-|nuORF'] 46596 14375 ITSLEHLGDDF True PC9_epitope_Rep1 1245.58773211541 1245.5866299358602 60.118 2 -0.5301235986470437 0.15005395859903856 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.N3720Kfs*28|2|0.54|ENSG00000157423|chr16:70868720-70868721|-/T|frameshift_variant', 'ENST00000309900.11_1_16:70928350-70955090:-|nuORF'] 91398 5806 RNEERWPRGRP True NCI_RA007_Epitope_Rep5 1451.7494267633097 1451.74777490379 29.018 3 -0.5301254526548951 0.15005395859903856 1.0 ['ENST00000373115.4_1_10:73769153-73769792:+|nuORF'] 7304 9565 ARRHCFSYWLL True NCI_RA007_Epitope_Rep4 1450.7292089126997 1450.7281099358602 43.638 2 -0.530125844595459 0.15005395859903856 1.0 ['ENSG00000174792|ENST00000311623|ODAPH', 'nc|ENSG00000174792|Q17RF5-2|ODAPH'] 135004 10611 YAGSGNVL True PC9_epitope_Rep2 779.38136817763 779.3808149679301 46.129 1 -0.5301438537630975 0.15005395859903856 1.0 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 67673 8917 LTFQCLRKNP True NCI_RA007_Epitope_Rep1 1218.6543126369397 1218.65320993586 38.686 2 -0.530183952222196 0.15005395859903856 1.0 ['ENST00000472403.5_2_17:42766475-42767202:+|nuORF'] 81934 4706 PSPPHHGVCGP True H1975_Epitope_Rep2 1083.49199833911 1083.4909099358601 23.194 2 -0.5302802285538578 0.1501005575630733 1.0 ['ENST00000609943.5_1_20:50140633-50179136:-|nuORF'] 140013 14719 YVLFYFLNC True NCI_RA007_Epitope_Rep3 1180.56270366788 1180.5616099358601 65.301 2 -0.5303545925093924 0.1501144538914323 1.0 ['ENST00000560776.1_1_15:59961053-59961500:-|nuORF'] 41655 9255 IDIKVIPN True H1975_Epitope_Rep3 910.5487678559 910.54766993586 40.592 2 -0.5304438786042317 0.15012834976537337 1.0 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 80505 6694 PLLLDSSHGP True NCI_RA007_Epitope_Rep4 1034.53965972418 1034.53856993586 32.372 2 -0.5305864970361288 0.15017003466091164 1.0 ['ENST00000463471.6_1_1:2491166-2493466:+|nuORF'] 31049 20211 GAVRTLRTGP True PC9_epitope_Rep6 1026.5934266325398 1026.59232993586 90.417 2 -0.5305886515241081 0.15017003466091164 1.0 ['ENSG00000140905|ENST00000315467|GCSH'] 110578 18952 TISGLLGLSL True PC9_epitope_Rep2 972.58554728744 972.58444993586 78.263 2 -0.5306059182570354 0.15017003466091164 1.0 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000488412.2_1_9:34648936-34649266:+|nuORF'] 127435 7936 VQSATVLDLK True H1975_Epitope_Rep1 1072.6128246644398 1072.61172993586 35.475 2 -0.5306750954496359 0.15018063524757655 1.0 ['ENST00000481947.1_1_16:105509-105883:+|nuORF', 'ENSG00000161981|ENST00000293861|SNRNP25', 'nc|ENSG00000161981|Q9BV90|SNRNP25'] 79371 6311 PGLALLEPRRP True NCI_RA007_Epitope_Rep5 1217.72444080209 1217.72278490379 30.954 3 -0.5307093353493806 0.15018063524757655 1.0 ['nc|ENSG00000204314|Q99946-2|PRRT1', 'ENSG00000204314|ENST00000211413|PRRT1'] 96266 8464 SEEQDNAP True H1975_Epitope_Rep2 888.3461048677199 888.34500993586 37.51 2 -0.530718703750179 0.15018063524757655 1.0 ['nc|ENSG00000119139|Q9UDY2-6|TJP2', 'nc|ENSG00000119139|Q9UDY2-3|TJP2', 'ENSG00000119139|ENST00000377245|TJP2', 'nc|ENSG00000119139|Q9UDY2-7|TJP2'] 96695 11275 SEPMEIPQHK True NCI_RA007_Epitope_Rep2 1194.5703082294601 1194.56920993586 48.445 2 -0.5307516334504312 0.15018063524757655 1.0 ['ENSG00000134627|ENST00000299001|PIWIL4', 'nc|ENSG00000134627|Q7Z3Z4-3|PIWIL4', 'nc|ENSG00000134627|Q7Z3Z4-2|PIWIL4'] 79556 7093 PGSSPRSSPR True NCI_RA007_Epitope_Rep2 1026.5206556151 1026.5195499358601 32.213 2 -0.5307868067826956 0.15018063524757655 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 117897 21867 VAQGIITGI True PC9_epitope_Rep5 870.51746772762 870.51636993586 89.149 2 -0.5307937959132664 0.15018063524757655 1.0 ['ENSG00000148110|ENST00000375344|MFSD14B'] 63851 12993 LPTSGAAATAA True PC9_epitope_Rep5 929.4818104948899 929.48070993586 54.987 2 -0.5308023016740782 0.15018063524757655 1.0 ['ENSG00000173933|ENST00000310092|RBM4', 'nc|ENSG00000239306|Q96PK6-5|RBM14'] 30314 16709 GADFSRRRG True PC9_epitope_Rep5 1020.5213243214398 1020.52022993586 69.277 2 -0.5308037025113141 0.15018063524757655 1.0 ['ENST00000374694.2_1_10:35930658-35931186:-|nuORF'] 28758 10149 FTANGADY True PC9_epitope_Rep5 857.3555473526098 857.35444993586 44.025 2 -0.5308081999127784 0.15018063524757655 1.0 ['nc|ENSG00000183762|Q96MU8-2|KREMEN1', 'ENSG00000183762|ENST00000400335|KREMEN1', 'nc|ENSG00000183762|Q96MU8|KREMEN1', 'KREMEN1-ZNRF3|1|fusion'] 42885 13182 IFSTDGVPV True H1975_Epitope_Rep2 933.4807478657299 933.47964993586 55.829 2 -0.5308281714376223 0.1501945270866708 1.0 ['ENSG00000182095|ENST00000430969|TNRC18'] 135756 5858 YELRCLLNK True NCI_RA007_Epitope_Rep5 1150.6168644990598 1150.61576993586 29.217 2 -0.5309131942258712 0.15024111156518186 1.0 ['ENSG00000100139|ENST00000215957|MICALL1'] 10991 4572 DDDMNEDTVER True H1975_Epitope_Rep3 1337.5041387140898 1337.5030499358602 22.707 2 -0.5309762980939446 0.15028278139200366 1.0 ['ENST00000520674.5_1_5:141017792-141019494:+|nuORF', 'ENST00000518025.5_1_5:141017849-141019494:+|nuORF', 'ENSG00000164620|ENST00000297164|RELL2'] 123669 5633 VINLSSHIE True NCI_RA007_Epitope_Rep5 1010.5396597241801 1010.53856993586 28.355 2 -0.5310059710525606 0.15028278139200366 1.0 ['ANKRD26|p.R1462S|1|0.48|ENSG00000107890|chr10:27017622-27017622|T/A|missense_variant'] 126605 7465 VPPPPPPPP True H1975_Epitope_Rep2 893.50108938749 893.49998993586 33.661 2 -0.5310221792206328 0.15028278139200366 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000494373.1_1_2:54014190-54014463:+|nuORF', 'ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1081Kfs*25|2|0.4|ENSG00000139734|chr13:59774745-59774746|-/T|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3', 'nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'nc|ENSG00000154380|Q8N8S7-3|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7|ENAH', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENSG00000188316|ENST00000341276|ENO4', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1'] 112146 12032 TLVEWLQSQ True NCI_RA007_Epitope_Rep2 1102.56587447202 1102.56476993586 51.394 2 -0.5310577346130378 0.15028930077473768 1.0 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-5|PPFIBP1'] 17253 16121 EHAPSIIFM-[Oxidation] True PC9_epitope_Rep3 1059.5059174481898 1059.50480993586 67.159 2 -0.531063883671707 0.15028930077473768 1.0 ['ENSG00000087191|ENST00000310144|PSMC5', 'nc|ENSG00000087191|P62195-2|PSMC5', 'ENST00000579147.5_1_17:61906826-61909326:+|nuORF'] 111471 13730 TLLGLLHG True PC9_epitope_Rep4 822.4963383602201 822.49524993586 60.71 2 -0.5310966612092823 0.15028930077473768 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2', 'nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1'] 1174 2722 AECPPPRQP True H1975_Epitope_Rep2 993.4702002653698 993.46910993586 14.564 2 -0.5310984256066319 0.15028930077473768 1.0 ['nc|ENSG00000255529|Q6EEV4-2|POLR2M', 'ENST00000380557.4_2_15:57998925-58001412:+|nuORF', 'ENST00000567643.1_1_15:57998925-57999700:+|nuORF', 'ENST00000299638.7_2_15:57998859-58000941:+|nuORF', 'nc|ENSG00000255529|Q6EEV4|POLR2M'] 136014 17536 YFLSVVLSAF True H1975_Epitope_Rep3 1144.61684741572 1144.61627496793 73.224 1 -0.5311701833015019 0.15030318879427293 1.0 ['chr10:133400890-133401529|101|14.64|0.0|20.48|+|0|TE_info:L1MB3,L1MB3_dup10751,L1,LINE,donor,-,133400616,133400890|None,MTG1|3'] 98545 6751 SILRGDYQDAF True NCI_RA007_Epitope_Rep2 1283.61461556959 1283.61350993586 30.875 2 -0.5313832636896277 0.1504731397192214 1.0 ['nc|ENSG00000179776|P33151-2|CDH5', 'ENSG00000179776|ENST00000341529|CDH5'] 90790 24141 RKRRTVHINLL True PC9_epitope_Rep4 1404.8789843808797 1404.8778899358601 101.34 2 -0.5314062720897794 0.1504731397192214 1.0 ['ENST00000494079.1_2_7:92205125-92206979:-|nuORF'] 136729 21745 YILVIYIFKTK True PC9_epitope_Rep6 1399.8479099797098 1399.84627490379 96.535 3 -0.5314095569752394 0.1504731397192214 1.0 ['ENST00000265404.6_1_4:68472071-68472191:+|nuORF'] 66173 5658 LSPGSGTPQA True PC9_epitope_Rep6 913.45051036661 913.44940993586 29.867 2 -0.5314316127480463 0.1504731397192214 1.0 ['nc|ENSG00000125744|O75298-2|RTN2', 'ENSG00000125744|ENST00000245923|RTN2'] 82428 11390 PVCGNNGL True PC9_epitope_Rep2 772.3537735307999 772.35266993586 49.133 2 -0.5314647048567612 0.15048702359939858 1.0 ['ENST00000463718.5_1_12:21428225-21457481:-|nuORF', 'nc|ENSG00000084453|P46721-2|SLCO1A2', 'ENSG00000084453|ENST00000683939|SLCO1A2'] 128635 24585 VSLGRRKTT True NCI_RA007_Epitope_Rep1 1016.6090766966801 1016.60796993586 101.83 2 -0.5314893625662875 0.15051478999836573 1.0 ['ENST00000455579.2_1_2:5836389-5847270:+|nuORF'] 127792 2134 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 11.835 3 -0.5315166810801737 0.15051478999836573 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 135416 16591 YDRYLKLW True PC9_epitope_Rep5 1155.6076797143498 1155.60604490379 68.823 3 -0.5316903658615588 0.15052867251720023 1.0 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 22082 8839 ESSVVAMFSP True NCI_RA007_Epitope_Rep4 1052.48484727 1052.48374993586 40.808 2 -0.5317097766093953 0.15054255458229834 1.0 ['ENST00000540725.5_1_11:62622368-62622964:-|nuORF', 'ENST00000544983.1_1_11:62622535-62622964:-|nuORF'] 77668 5316 PAAAAAAPAA True PC9_epitope_Rep5 780.4130026590799 780.41190993586 25.461 2 -0.5317943907705731 0.15055643619368228 1.0 ['ENST00000595775.5_1_19:42817488-42818494:+|nuORF'] 60117 14850 LHVGATPSPL True PC9_epitope_Rep6 990.54983048506 990.54872993586 69.094 2 -0.5318708661450323 0.15056785685104992 1.0 ['nc|ENSG00000139445|Q96NZ1-2|FOXN4', 'FOXN4|p.L267Cfs*4|1|0.27|ENSG00000139445|chr12:109285406-109285406|G/-|frameshift_variant', 'ENSG00000139445|ENST00000299162|FOXN4'] 119370 7651 VENNSTLEK True H1975_Epitope_Rep3 1032.50875351872 1032.5076499358602 34.411 2 -0.5318813283287909 0.15056785685104992 1.0 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'ENST00000492546.1_1_2:231337968-231358532:+|nuORF'] 129345 18307 VTDVTANLI True PC9_epitope_Rep5 944.51786165044 944.51676993586 75.432 2 -0.5319014875468149 0.15059561743222707 1.0 ['ENSG00000173894|ENST00000310942|CBX2'] 125136 15792 VLPRNLAL True PC9_epitope_Rep2 894.5650866263799 894.56398993586 66.008 2 -0.5319503035573484 0.15059561743222707 1.0 ['ENSG00000188676|ENST00000502986|IDO2', 'nc|ENSG00000188676|Q6ZQW0-2|IDO2'] 46703 7987 ITYGNECHLC-[Carbamidomethyl] True H1975_Epitope_Rep2 1208.4954293164699 1208.4943299358602 35.671 2 -0.5319998584516101 0.15060949704238702 1.0 ['ENSG00000145879|ENST00000274565|SPINK7'] 12127 17235 DIHVAMEENV True PC9_epitope_Rep5 1155.52302368387 1155.52192993586 71.311 2 -0.5320584590188276 0.15063971633523424 1.0 ['ENSG00000144619|ENST00000418658|CNTN4', 'ENST00000438282.6_1_3:2613181-3030164:+|nuORF', 'ENST00000430505.6_1_3:2613181-3079017:+|nuORF'] 88089 18286 QVVNQMNKKL True PC9_epitope_Rep5 1200.66487732064 1200.66322490379 75.352 3 -0.5321060208544365 0.15068627450980393 1.0 ['ENSG00000138756|ENST00000502613|BMP2K', 'nc|ENSG00000138756|Q9NSY1-2|BMP2K', 'nc|ENSG00000138756|Q9NSY1-3|BMP2K'] 68050 13040 LTNISALE True NCI_RA007_Epitope_Rep4 859.46509780159 859.46454496793 57.26 1 -0.5321339822775542 0.1507164915605954 1.0 ['nc|ENSG00000151164|Q6WBX8-3|RAD9B', 'nc|ENSG00000151164|Q6WBX8-4|RAD9B', 'nc|ENSG00000151164|Q6WBX8-2|RAD9B', 'nc|ENSG00000151164|Q6WBX8-1|RAD9B', 'ENSG00000151164|ENST00000409300|RAD9B', 'nc|ENSG00000151164|Q6WBX8|RAD9B'] 10332 6309 CIEEGEKPMVI True H1975_Epitope_Rep3 1246.59374609598 1246.5926499358602 29.272 2 -0.5322818042009265 0.15074670762393386 1.0 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 130995 17933 VVLEAMARDPP True PC9_epitope_Rep5 1196.6223438023198 1196.62069490379 73.997 3 -0.5323684840229045 0.15084227897325295 1.0 ['nc|ENSG00000105137|Q6ZW31-2|SYDE1', 'ENSG00000105137|ENST00000342784|SYDE1'] 111669 21403 TLPDLVPQL True PC9_epitope_Rep4 994.5698972232999 994.56880993586 90.497 2 -0.5323999773317135 0.1508487591288578 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 100926 11682 SLSNKNLNI True PC9_epitope_Rep5 1001.5505587610501 1001.54946993586 49.931 2 -0.5324013541268839 0.1508487591288578 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 16811 11639 EFLNSHLLPK True H1975_Epitope_Rep3 1196.65535818276 1196.6542699358602 49.904 2 -0.532442187270163 0.1508487591288578 1.0 ['ENSG00000156006|ENST00000286479|NAT2'] 19810 18324 ELTQQLNTLFQ True PC9_epitope_Rep2 1333.68778050985 1333.6866899358602 75.813 2 -0.532450053972113 0.1508487591288578 1.0 ['CON__Q32PJ2'] 62724 10947 LLYEYVGKR True PC9_epitope_Rep4 1139.6338944621898 1139.63278993586 49.876 2 -0.5325900307656843 0.15092798327016077 1.0 ['ENSG00000274180|ENST00000611551|NATD1'] 99247 11319 SLCVQHEVCC True PC9_epitope_Rep2 1119.45112169691 1119.4500299358601 48.861 2 -0.5326694766491665 0.1509557261885313 1.0 ['ENST00000262150.6_1_18:64239265-64271331:-|nuORF'] 133454 14329 WGKLLCLP True H1975_Epitope_Rep2 928.52044493308 928.51934993586 60.266 2 -0.5326719735889424 0.1509557261885313 1.0 ['ENST00000569839.1_1_16:57608733-57625590:+|nuORF'] 81557 10290 PRFTPWWERAK True NCI_RA007_Epitope_Rep1 1472.7677025963997 1472.76660993586 44.032 2 -0.5326885434915679 0.15096959696786524 1.0 ['nc|ENSG00000164485|Q969J5-3|IL22RA2'] 16120 8423 EEEEEEEVP True PC9_epitope_Rep1 1117.4298940613298 1117.42878993586 37.235 2 -0.532728706533513 0.15099733716694166 1.0 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 112238 8356 TLYDLTEI True PC9_epitope_Rep3 966.49097819626 966.48988993586 37.109 2 -0.5327527749099344 0.15099733716694166 1.0 ['ENSG00000165125|ENST00000359396|TRPV6', 'nc|ENSG00000165125|Q9H1D0-2|TRPV6'] 49089 18807 KFWYEMPNNLL True H1975_Epitope_Rep3 1453.7064077794496 1453.7053099358602 78.88 2 -0.5328067298917685 0.15100873968798498 1.0 ['ENST00000475777.2_1_12:110883197-110888065:-|nuORF'] 64853 19733 LSANITGF True H1975_Epitope_Rep3 821.42831837005 821.4277649679301 82.632 1 -0.5328086639357211 0.15100873968798498 1.0 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 124593 3643 VLHFMCFFK True NCI_RA007_Epitope_Rep4 1170.57182888294 1170.57019490379 20.095 3 -0.5329970228024229 0.15106914745903915 1.0 ['ENST00000216039.9_1_22:39096217-39096355:-|nuORF'] 61525 7304 LLGDEKQSI True PC9_epitope_Rep5 1001.5393253710099 1001.53822993586 33.056 2 -0.5330037475958033 0.15106914745903915 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 18512 8856 EKQEEERSK True NCI_RA007_Epitope_Rep1 1161.56257999673 1161.5614899358602 38.448 2 -0.5330589112435202 0.15108301479956876 1.0 ['nc|ENSG00000100764|P62191-2|PSMC1', 'ENSG00000100764|ENST00000261303|PSMC1', 'ENST00000555679.5_1_14:90722941-90730197:+|nuORF'] 73410 16972 NESAVIVAP True PC9_epitope_Rep5 898.4759968384599 898.47544496793 70.302 1 -0.5331356195146933 0.15116222087913883 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 115494 9298 TVGEITDALKK True NCI_RA007_Epitope_Rep2 1173.6605031328497 1173.6594099358601 40.774 2 -0.5332103835223877 0.15122508983992158 1.0 ['ENSG00000146085|ENST00000274813|MMUT'] 72863 20393 NAPVLLALLG True H1975_Epitope_Rep3 979.6066170851899 979.60552993586 85.267 2 -0.5332478240798347 0.15126915161216556 1.0 ['ENSG00000105220|ENST00000356487|GPI', 'nc|ENSG00000105220|P06744-2|GPI', 'ENST00000586392.1_1_19:34884680-34890938:+|nuORF', 'CON__Q3ZBD7', 'LSM14A-GPI|2|fusion'] 63833 20064 LPTEPLTAE True PC9_epitope_Rep4 969.5018772331299 969.50132496793 85.312 1 -0.5332637837148964 0.15126915161216556 1.0 ['ENST00000441363.1_1_6:74009094-74009619:+|nuORF'] 127784 854 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 4.7455 3 -0.5332874780372932 0.15128301455335413 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 93655 5218 RTFFCHERLPP True H1975_Epitope_Rep2 1401.6975744312497 1401.69592490379 25.139 3 -0.5333588356930105 0.151296877041683 1.0 ['ENST00000424894.1_1_6:106535744-106536103:+|nuORF'] 13285 8780 DLWYLETEKP True PC9_epitope_Rep3 1292.6288686514 1292.6277699358602 38.725 2 -0.5334337048816499 0.15131073907717435 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1', 'nc|ENSG00000172534|P51610-3|HCFC1'] 39727 8376 HPVMRRNPF True NCI_RA007_Epitope_Rep3 1152.59746646716 1152.5958149037901 40.047 3 -0.5335003942776253 0.15135479445342742 1.0 ['ENSG00000171310|ENST00000303694|CHST11'] 54743 5586 LAEPM[Oxidation]TYKLM[Oxidation] True NCI_RA007_Epitope_Rep1 1227.58793320043 1227.5868299358601 25.796 2 -0.5335193870500475 0.15135479445342742 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1'] 131422 22109 VVTLLSNY True PC9_epitope_Rep6 907.50148331031 907.5009349679301 97.984 1 -0.5335958706126173 0.1513637105993794 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 129016 19128 VSYTTPAPLE True PC9_epitope_Rep4 1076.5389910178399 1076.5378899358602 81.669 2 -0.533641823864619 0.1513637105993794 1.0 ['ENST00000470336.5_1_3:100469341-100565327:-|nuORF'] 34188 10313 GPGPALSIL True H1975_Epitope_Rep3 823.48035394291 823.47980496793 44.722 1 -0.533704680121848 0.1513637105993794 1.0 ['ENST00000588822.1_1_17:74722977-74723331:+|nuORF', 'ENST00000590964.5_1_17:74722977-74729181:+|nuORF'] 15047 3182 EAAERVESA True H1975_Epitope_Rep3 960.4512386425998 960.4501499358599 16.846 2 -0.5338168793111662 0.15141023337851742 1.0 ['nc|ENSG00000230487|Q96PY0|PSMG3-AS1', 'ENST00000437621.6_1_7:1626575-1627631:+|nuORF'] 100535 14747 SLPSWSCSLSI True PC9_epitope_Rep6 1178.56416021986 1178.56306993586 68.672 2 -0.5338644943463401 0.1514216190616171 1.0 ['ENST00000320623.9_1_16:69752155-69760649:-|nuORF'] 87791 19211 QVIASFKVL True PC9_epitope_Rep5 1003.6066170851899 1003.60552993586 78.934 2 -0.5338787839357447 0.1514216190616171 1.0 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4', 'ENST00000497637.5_1_19:39218501-39220069:+|nuORF'] 23523 13447 EWQTWRLLRRP True H1975_Epitope_Rep1 1539.8422645189899 1539.84116993586 56.839 2 -0.5339098972858254 0.15144686132340454 1.0 ['ENST00000543005.5_1_12:124118406-124132575:+|nuORF', 'ENST00000537368.5_1_12:124123856-124132575:+|nuORF', 'ENST00000538845.5_1_12:124123856-124132575:+|nuORF'] 19259 17615 ELLKLYYRRL True NCI_RA007_Epitope_Rep1 1365.81325580649 1365.8121499358601 72.654 2 -0.5339167951181476 0.15144686132340454 1.0 ['ENSG00000198056|ENST00000338193|PRIM1', 'ENST00000548173.5_1_12:57140708-57146082:-|nuORF'] 124829 18946 VLLLGDVATL True PC9_epitope_Rep1 1012.61684741572 1012.61574993586 77.659 2 -0.5339376040771281 0.15144686132340454 1.0 ['nc|ENSG00000123191|P35670-2|ATP7B', 'nc|ENSG00000123191|P35670-3|ATP7B', 'nc|ENSG00000123191|P35670-4|ATP7B', 'ENSG00000123191|ENST00000242839|ATP7B'] 13149 16583 DLSSRSLLGI True PC9_epitope_Rep2 1059.59242357303 1059.5913299358601 69.023 2 -0.5339710920159186 0.1514607181932492 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 59378 19613 LGLFQGQNSL True PC9_epitope_Rep2 1075.56620882519 1075.5651099358602 80.826 2 -0.5339787441866176 0.15147457461053593 1.0 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 85929 8188 QNVVVTEAVKE True H1975_Epitope_Rep3 1214.65066672514 1214.6495699358602 36.475 2 -0.5340381706961772 0.1514973384278763 1.0 ['nc|ENSG00000154645|Q9H9P2-3|CHODL', 'chr21:17917400-18256509|409|12.4|0.24|5.68|+|ENST00000400131|CHODL,CHODL'] 133747 27340 WLLKRLKAKKP True PC9_epitope_Rep3 1379.9129102781098 1379.91127490379 112.64 3 -0.5341000097277229 0.1514973384278763 1.0 ['ENST00000373465.2_1_X:46278605-46278842:-|nuORF'] 87229 6654 QSPSANVL True NCI_RA007_Epitope_Rep4 814.41848196234 814.41793496793 32.216 1 -0.5341071447754437 0.1514973384278763 1.0 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'LTBP1-BIRC6|4|fusion', 'LTBP1-BIRC6|5|fusion', 'ENST00000471232.5_1_2:32750532-32815924:+|nuORF'] 66171 15819 LSPGIFGPMP True PC9_epitope_Rep2 1014.5208388558999 1014.51974993586 66.108 2 -0.5341151768371164 0.1514973384278763 1.0 ['ENSG00000172061|ENST00000347624|LRRC15', 'nc|ENSG00000172061|Q8TF66-2|LRRC15'] 26850 9794 FLERYIYNREE True NCI_RA007_Epitope_Rep2 1530.7466923682998 1530.7455899358602 42.72 2 -0.5341871038613504 0.15154137548167984 1.0 ['ENST00000469120.1_1_6:33043797-33048717:+|nuORF', 'ENST00000471184.5_1_6:33048250-33051373:+|nuORF', 'ENSG00000223865|ENST00000418931|HLA-DPB1'] 12223 20700 DIPQSPLDAF True PC9_epitope_Rep5 1101.5342399905699 1101.5331499358601 84.68 2 -0.5341917022035 0.15154137548167984 1.0 ['OR10AG1|p.N13Qfs*8|1|0.26|ENSG00000174970|chr11:55968427-55968428|-/G|frameshift_variant'] 78556 5603 PDNWGHGHGP True H1975_Epitope_Rep2 1072.4474906748399 1072.44638993586 26.554 2 -0.5343721957614006 0.15158540965940634 1.0 ['ENSG00000158270|ENST00000400256|COLEC12', 'ENST00000582147.1_1_18:320047-333168:-|nuORF'] 4881 7102 ALGENGVIK True PC9_epitope_Rep4 899.5076313199099 899.50652993586 34.585 2 -0.5343820569543521 0.15158540965940634 1.0 ['ENST00000496004.5_1_7:151188088-151217094:-|nuORF'] 10092 24937 AYVKLLSKTP True PC9_epitope_Rep3 1118.66994561774 1118.6688499358602 101.29 2 -0.5344143119400909 0.1515967868338558 1.0 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'ENST00000503126.1_1_5:179133324-179137021:+|nuORF', 'nc|ENSG00000127022|P27824-3|CANX'] 101582 14373 SPEAVAGVGF True PC9_epitope_Rep4 932.4603467743199 932.45924993586 63.193 2 -0.5344301165273349 0.1515967868338558 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 98865 12287 SIVGLGSVAV True PC9_epitope_Rep4 900.5280324113199 900.52692993586 55.078 2 -0.5344403884126251 0.1516106385410374 1.0 ['ENST00000378700.7_2_6:19837725-19837965:+|nuORF'] 138276 4211 YQYHLRQHTG True H1975_Epitope_Rep1 1301.62651766597 1301.6248649037902 21.16 3 -0.5344860575777554 0.15163091389950045 1.0 ['ENSG00000197483|ENST00000598519|ZNF628'] 117497 7617 VAEPLKTHHSI True PC9_epitope_Rep4 1230.6720708760602 1230.67042490379 36.681 3 -0.5345034226366372 0.15163091389950045 1.0 ['ENST00000520838.1_1_5:138080350-138088780:-|nuORF'] 60377 26498 LIIIKDLLLLI True H1975_Epitope_Rep3 1278.8890465156999 1278.8874149037902 110.62 3 -0.5345205717982909 0.15163091389950045 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 98186 16477 SIDPEFYNSL True H1975_Epitope_Rep2 1183.5397192938299 1183.5386299358602 68.596 2 -0.5345355133762232 0.15163091389950045 1.0 ['ITCH-NCOA6|3|fusion', 'ITCH-NCOA6|1|fusion', 'ENSG00000078747|ENST00000374864|ITCH', 'nc|ENSG00000289720|Q96J02|ITCH', 'ITCH-NCOA6|2|fusion', 'nc|ENSG00000289720|Q96J02-3|ITCH'] 16614 5510 EERVWEYPEGV True H1975_Epitope_Rep1 1391.6357449369898 1391.6346499358601 26.256 2 -0.5345577604869113 0.15163091389950045 1.0 ['ENSG00000104142|ENST00000220509|VPS18'] 69573 11674 LVTSGVYAWFR True NCI_RA007_Epitope_Rep1 1297.68190728377 1297.68080993586 49.383 2 -0.5346239508664874 0.15165861303382525 1.0 ['ENSG00000116237|ENST00000343813|ICMT'] 64180 5727 LQHHQIIQQ True NCI_RA007_Epitope_Rep5 1143.61489035311 1143.61378993586 28.717 2 -0.5346267794556083 0.15165861303382525 1.0 ['ENSG00000136937|ENST00000375147|NCBP1'] 45777 7860 ISNKTVAV True PC9_epitope_Rep1 830.4861675993399 830.48506993586 35.06 2 -0.5346471390920866 0.15166998596101733 1.0 ['NUP210L|p.Q1121K|1|0.36|ENSG00000143552|chr1:154054350-154054350|G/T|missense_variant'] 71230 19194 MFVFKERWFWR True PC9_epitope_Rep3 1630.8231092975398 1630.82200993586 79.047 2 -0.5346687328457668 0.15166998596101733 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 69411 7940 LVQTLPIE True NCI_RA007_Epitope_Rep3 911.5327834385898 911.53168993586 38.34 2 -0.5346856523331852 0.15169520575896572 1.0 ['COL22A1|p.P1254Lfs*174|1|0.29|ENSG00000169436|chr8:138623742-138623742|G/-|frameshift_variant', 'nc|ENSG00000169436|Q8NFW1-2|COL22A1', 'COL22A1|p.G1545Vfs*79|1|0.59|ENSG00000169436|chr8:138591488-138591488|G/-|frameshift_variant', 'ENSG00000169436|ENST00000303045|COL22A1'] 21873 10159 ESEGRTIEL True PC9_epitope_Rep4 1032.50875351872 1032.5076499358602 46.752 2 -0.5346892290852621 0.15169520575896572 1.0 ['nc|ENSG00000147394|O15231-4|ZNF185', 'nc|ENSG00000147394|O15231-7|ZNF185', 'nc|ENSG00000147394|O15231|ZNF185', 'nc|ENSG00000147394|O15231-3|ZNF185', 'nc|ENSG00000147394|O15231-8|ZNF185', 'nc|ENSG00000147394|O15231-6|ZNF185', 'ENSG00000147394|ENST00000695776|ZNF185'] 566 8196 AARHHLPWSAP True PC9_epitope_Rep3 1241.6417738072898 1241.64013490379 36.505 3 -0.5347062083652104 0.15169520575896572 1.0 ['ENST00000533465.1_1_11:65349377-65351970:+|nuORF'] 113362 18927 TQKVAIIELT True PC9_epitope_Rep2 1114.6597748568597 1114.6586699358602 78.167 2 -0.5348242975431642 0.15174169958538736 1.0 ['ENSG00000139618|ENST00000380152|BRCA2'] 33360 7580 GLEKELQEVRR True H1975_Epitope_Rep1 1355.7521121019097 1355.75047490379 34.149 3 -0.5349384130190844 0.15179955929160205 1.0 ['ENST00000581564.1_1_17:38813911-38818272:-|nuORF', 'nc|ENSG00000264058|Q8N1A0-2|KRT222', 'ENSG00000213424|ENST00000394052|KRT222', 'CON__Q8N1A0'] 81550 13814 PRECYCSL True PC9_epitope_Rep5 969.4048231274899 969.40372993586 58.154 2 -0.534942307366559 0.15179955929160205 1.0 ['ENST00000309993.2_1_3:135913869-135914463:-|nuORF'] 19712 7127 ELSKEECCSTG True H1975_Epitope_Rep1 1184.4689395056798 1184.4678499358602 32.44 2 -0.5349534404226284 0.15179955929160205 1.0 ['nc|ENSG00000134363|P19883-2|FST', 'ENSG00000134363|ENST00000256759|FST'] 43630 16528 IIKKEVSF True PC9_epitope_Rep1 962.5800679841799 962.57896993586 68.398 2 -0.5350141682708831 0.1518084481295293 1.0 ['USH2A|p.G1809V|1|0.09|ENSG00000042781|chr1:216078235-216078235|C/A|missense_variant'] 139495 14722 YTHSQAHSP True PC9_epitope_Rep5 1026.45190734894 1026.4508099358602 61.628 2 -0.5350201644016521 0.1518084481295293 1.0 ['ENSG00000283439|ENST00000636696|SPEM3'] 139627 13419 YTRQTDILQ True PC9_epitope_Rep4 1136.5825871653199 1136.5814899358602 59.516 2 -0.5350232824309881 0.1518084481295293 1.0 ['ENSG00000151320|ENST00000280979|AKAP6', 'AKAP6|p.V325Gfs*18|1|0.11|ENSG00000151320|chr14:32545621-32545622|-/G|frameshift_variant', 'nc|ENSG00000151320|Q13023-2|AKAP6'] 115192 6412 TVASLQHYFP True NCI_RA007_Epitope_Rep1 1161.5818588893299 1161.58021490379 28.966 3 -0.5351008760215651 0.1518336570318748 1.0 ['ENST00000415611.7_1_7:22898472-22898607:+|nuORF'] 38039 13188 HEKPEGRPTF True PC9_epitope_Rep5 1196.5938205553596 1196.59216490379 55.732 3 -0.5351175239158409 0.1518336570318748 1.0 ['ENSG00000074966|ENST00000264316|TXK'] 120241 5560 VFNSRTAY True NCI_RA007_Epitope_Rep3 956.4715801643599 956.47048993586 28.864 2 -0.5351243283114 0.1518336570318748 1.0 ['ENSG00000139209|ENST00000266579|SLC38A4'] 30393 10462 GAFADRPTSP True PC9_epitope_Rep2 1017.4879585044899 1017.48686993586 45.56 2 -0.535184586942857 0.1518450214613288 1.0 ['nc|ENSG00000118407|Q7Z7B0-2|FILIP1', 'ENSG00000118407|ENST00000237172|FILIP1', 'nc|ENSG00000118407|Q7Z7B0-3|FILIP1', 'FILIP1|p.G1085Vfs*9|1|0.23|ENSG00000118407|chr6:75312572-75312578|CTGACTC/-|frameshift_variant'] 48400 20099 KEDKLFRKKRR True PC9_epitope_Rep2 1502.9157638124195 1502.91412490379 82.719 3 -0.5352047185087675 0.1518450214613288 1.0 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B'] 134465 11384 WTQMWNRPCR True PC9_epitope_Rep3 1376.623029592 1376.62138490379 48.791 3 -0.53523841218294 0.15185886346574404 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 66931 4000 LSYHRMWMVRW True NCI_RA007_Epitope_Rep2 1563.75912914199 1563.75748490379 20.197 3 -0.5352819695706229 0.15188654611919838 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 122504 19048 VGSRVLRRWQE True PC9_epitope_Rep6 1384.7687652255597 1384.76766993586 85.912 2 -0.5352859497563294 0.15188654611919838 1.0 ['nc|ENSG00000225697|Q9BXS9-6|SLC26A6', 'ENST00000462009.6_1_3:48665195-48667128:-|nuORF'] 60622 7241 LISTQALA True PC9_epitope_Rep2 815.4752685624699 815.47416993586 33.242 2 -0.5353122298810583 0.1519280667112714 1.0 ['ENSG00000157211|ENST00000530059|CDCP2'] 68312 11784 LTRSFYLEPM True H1975_Epitope_Rep1 1255.62709482959 1255.6259899358602 50.32 2 -0.5353239934763998 0.1519280667112714 1.0 ['ENSG00000176009|ENST00000531618|ASCL3'] 5508 7343 AMWGHQKRAP True PC9_epitope_Rep5 1180.5923810867198 1180.59073490379 33.205 3 -0.5353281187631364 0.1519280667112714 1.0 ['chr18:39751360-39800069|451|13.46|0.51|4.74|-|1|MIR924HG,MIR924HG|1'] 41768 19316 IDQFGPPMI True PC9_epitope_Rep5 1016.5001034113199 1016.49900993586 79.344 2 -0.5353384059605497 0.1519369472275709 1.0 ['ENSG00000139926|ENST00000344768|FRMD6', 'nc|ENSG00000139926|Q96NE9-2|FRMD6'] 62473 12135 LLSNDEVTIK True PC9_epitope_Rep3 1130.6183039677 1130.61720993586 51.718 2 -0.5353707396063958 0.1519369472275709 1.0 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG'] 111428 24632 TLKKTLIESKL True PC9_epitope_Rep1 1272.8016880632797 1272.8000549037902 99.622 3 -0.5353830415102919 0.1519369472275709 1.0 ['ENSG00000148843|ENST00000369797|PDCD11'] 74285 14860 NIILNIGRMHR True NCI_RA007_Epitope_Rep1 1335.75575801371 1335.7546699358602 61.862 2 -0.53539142415969 0.15195078569913353 1.0 ['ENSG00000137869|ENST00000396402|CYP19A1', 'CYP19A1|p.T462Ifs*7|1|0.33|ENSG00000137869|chr15:51210934-51210935|TG/-|frameshift_variant'] 116238 8031 TVTWTTWVP True NCI_RA007_Epitope_Rep1 1089.54949613189 1089.54838993586 35.235 2 -0.53542170384361 0.1519646237190784 1.0 ['ENSG00000183760|ENST00000331256|ACP7'] 99108 19531 SLAFFNSVANP True PC9_epitope_Rep2 1165.5767735088898 1165.57566993586 80.51 2 -0.5354460301801258 0.1519784612874276 1.0 ['ENSG00000183134|ENST00000332539|PTGDR2'] 98303 19377 SIFSSDLYD True PC9_epitope_Rep2 1045.46040634397 1045.4593099358601 79.911 2 -0.5354933258220459 0.15199229840420325 1.0 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 130221 13328 VTSITTVSL True H1975_Epitope_Rep3 919.5226126777101 919.5220649679301 56.526 1 -0.5355150224365416 0.15202245174343662 1.0 ['NRROS|p.N312S|2|0.11|ENSG00000174004|chr3:196660578-196660578|A/G|missense_variant'] 115871 8549 TVNVTVLDAN True H1975_Epitope_Rep2 1044.54513902744 1044.5440499358601 37.839 2 -0.5356175045254737 0.15210155332202063 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 76447 9982 NSYYSSPA True PC9_epitope_Rep6 887.36611203631 887.36500993586 48.949 2 -0.5357345372129594 0.15212922173274596 1.0 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 130209 10526 VTSEEFDKF True H1975_Epitope_Rep3 1100.50260550912 1100.5015099358602 45.554 2 -0.5357636704783147 0.15212922173274596 1.0 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000577794.1_1_17:17750951-17752188:-|nuORF', 'ENST00000492723.1_1_22:35741624-35743199:+|nuORF', 'nc|ENSG00000175662|Q6ZVM7-4|TOM1L2', 'nc|ENSG00000175662|Q6ZVM7-3|TOM1L2', 'nc|ENSG00000175662|Q6ZVM7-5|TOM1L2', 'ENSG00000175662|ENST00000379504|TOM1L2', 'nc|ENSG00000175662|Q6ZVM7-2|TOM1L2'] 20048 7528 ENDETRFILSK True NCI_RA007_Epitope_Rep2 1350.6779441021401 1350.6768499358602 33.908 2 -0.5357903456861683 0.15214057299484435 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17'] 22622 7775 ETQKWDIK True NCI_RA007_Epitope_Rep2 1046.53965972418 1046.53856993586 34.872 2 -0.5358073892511328 0.15214057299484435 1.0 ['CRYBG3|p.E2968K|1|0.21|ENSG00000080200|chr3:97943303-97943303|G/A|missense_variant'] 56855 5926 LEDHEHDDEEE True H1975_Epitope_Rep2 1395.5062468890703 1395.50461490379 27.779 3 -0.5359243134062147 0.15221966619352945 1.0 ['CLSPN|p.D1031H|1|0.14|ENSG00000092853|chr1:35743193-35743193|C/G|missense_variant'] 82017 18583 PSTHFLSIVI True PC9_epitope_Rep5 1112.62299542532 1112.62188993586 76.504 2 -0.5359861033884401 0.152223563574668 1.0 ['ENSG00000134115|ENST00000446702|CNTN6'] 4964 13154 ALIFTHRRL True NCI_RA007_Epitope_Rep5 1125.6770966868498 1125.6759899358601 57.275 2 -0.5359918569320419 0.152223563574668 1.0 ['ENSG00000232382|ENST00000642057|OR5K1'] 76212 23781 NRWWRWRRARW True PC9_epitope_Rep3 1727.9134128269898 1727.91230993586 96.758 2 -0.5359953108668751 0.152223563574668 1.0 ['nc|ENSG00000171160|Q8NDC4-2|MORN4'] 110131 5398 TICSAWFPP True H1975_Epitope_Rep2 1020.4738886634799 1020.47278993586 25.796 2 -0.5360052450475172 0.152223563574668 1.0 ['ENST00000370351.8_1_20:61598972-61599257:+|nuORF'] 81526 6350 PQVADLESL True NCI_RA007_Epitope_Rep1 970.49712620586 970.49602993586 28.726 2 -0.5360391278671272 0.152223563574668 1.0 ['SPOCD1|p.R938Gfs*122|1|0.29|ENSG00000134668|chr1:31792365-31792365|G/-|frameshift_variant', 'nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-5|SPOCD1'] 97534 8018 SGTSDPYVKI True H1975_Epitope_Rep3 1065.5342399905699 1065.5331499358601 35.814 2 -0.5360935001797554 0.15224625623960067 1.0 ['ENSG00000170743|ENST00000318881|SYT9'] 57242 8308 LEFLDVQK True H1975_Epitope_Rep3 990.53859709502 990.53750993586 36.94 2 -0.5361075907516936 0.15224625623960067 1.0 ['ENST00000383742.7_2_3:46712476-46718839:-|nuORF', 'nc|ENSG00000178038|Q60I27-3|ALS2CL', 'nc|ENSG00000178038|Q60I27-2|ALS2CL', 'ENSG00000178038|ENST00000318962|ALS2CL', 'ENST00000498817.5_1_3:46713372-46716156:-|nuORF', 'nc|ENSG00000178038|Q60I27-5|ALS2CL', 'ENST00000486301.5_1_3:46712476-46716264:-|nuORF', 'ENST00000434140.5_2_3:46712476-46717187:-|nuORF', 'nc|ENSG00000178038|Q60I27-6|ALS2CL', 'ENST00000473484.1_1_3:46713038-46716081:-|nuORF', 'nc|ENSG00000178038|Q60I27-4|ALS2CL'] 88022 11334 QVSPRARFP True H1975_Epitope_Rep1 1056.5828619488398 1056.5817699358602 48.575 2 -0.5361347846073459 0.15224625623960067 1.0 ['nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2'] 11209 9871 DELNDMKDY True H1975_Epitope_Rep1 1141.45975472097 1141.4586499358602 42.902 2 -0.5362278892352059 0.15224625623960067 1.0 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion', 'CCPG1|p.R563Kfs*79|1|0.19|ENSG00000260916|chr15:55360085-55360085|C/-|frameshift_variant', 'nc|ENSG00000260916|Q9ULG6-3|CCPG1', 'ZNF33B-CCPG1|2|fusion'] 58144 11259 LESEWCLIPTV True H1975_Epitope_Rep2 1288.6373251601199 1288.63622993586 48.352 2 -0.5362340929587515 0.15226008515080827 1.0 ['ENST00000439384.5_3_7:29186332-29186525:+|nuORF'] 116349 15565 TVYDRTTVL True PC9_epitope_Rep5 1066.5658744720201 1066.56476993586 64.88 2 -0.5363661229572572 0.15228774161977 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 73364 11836 NEQFGSCYQF True H1975_Epitope_Rep1 1221.47607349145 1221.4749699358601 50.524 2 -0.5364020147418321 0.15228774161977 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'LY75|p.E1442Kfs*4|1|0.35|ENSG00000054219|chr2:159816862-159816862|C/-|frameshift_variant', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 44727 10086 IPQNQKAI True PC9_epitope_Rep1 910.5236157372199 910.52250993586 43.667 2 -0.53642195971036 0.15229163268634807 1.0 ['ENST00000582341.1_1_17:73038242-73038745:-|nuORF', 'nc|ENSG00000167863|O75947-2|ATP5PD', 'ENSG00000167863|ENST00000301587|ATP5PD'] 59827 16176 LHDPDLDF True PC9_epitope_Rep5 970.43961132974 970.43850993586 67.211 2 -0.5364413088673087 0.15229163268634807 1.0 ['ENSG00000197077|ENST00000358431|KIAA1671'] 40077 2597 HRAREHRRP True NCI_RA007_Epitope_Rep5 1213.6653032165298 1213.66366490379 14.707 3 -0.5364549969692534 0.15229163268634807 1.0 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 12877 7915 DLLLNPPVP True H1975_Epitope_Rep2 976.5593325396 976.55822993586 35.393 2 -0.5364797736964851 0.15229163268634807 1.0 ['ENST00000156825.5_1_19:1577157-1577418:-|nuORF'] 61562 15555 LLGLKKLSFYY True NCI_RA007_Epitope_Rep3 1343.78530972315 1343.7842099358602 68.751 2 -0.5364905993224177 0.15229163268634807 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 72003 9249 MQEESAAPERG True PC9_epitope_Rep5 1203.5190009325897 1203.5179099358602 40.523 2 -0.5365869899742007 0.15231928496868477 1.0 ['ENSG00000162592|ENST00000294600|CCDC27'] 65759 12298 LSIGSLDVLP True H1975_Epitope_Rep2 1012.580461907 1012.57936993586 52.388 2 -0.5366042857280718 0.15231928496868477 1.0 ['ENST00000519610.1_1_5:150534942-150535005:-|nuORF'] 62927 20034 LNANTGLTL True PC9_epitope_Rep5 915.50254593947 915.50144993586 82.112 2 -0.5366780622622123 0.15236572994307895 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 46874 17710 IVGQAGIGLSV True PC9_epitope_Rep1 1012.5916952970399 1012.59058993586 72.917 2 -0.5367009663939031 0.1523933784555166 1.0 ['nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2'] 132262 6357 VYLAEKGEND True NCI_RA007_Epitope_Rep1 1136.5349682665599 1136.53333490379 28.754 3 -0.5367094073138593 0.1523933784555166 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 13757 11296 DQLSKLKDER True H1975_Epitope_Rep1 1230.65681473474 1230.6557099358602 48.427 2 -0.5368598305296086 0.1524724378628743 1.0 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 54740 4797 LAEPM[Oxidation]TYKLM[Oxidation] True H1975_Epitope_Rep3 1227.58793320043 1227.5868299358601 23.579 2 -0.5369624661870416 0.15256780338242248 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1'] 14659 4251 DVNCLDDSFPP True H1975_Epitope_Rep2 1220.50195388612 1220.50084993586 21.461 2 -0.5371403617135725 0.15267449445531636 1.0 ['ENST00000452157.5_1_5:56218957-56234137:-|nuORF', 'nc|ENSG00000155545|Q7Z3K6-4|MIER3', 'nc|ENSG00000155545|Q7Z3K6-3|MIER3', 'ENSG00000155545|ENST00000381199|MIER3', 'nc|ENSG00000155545|Q7Z3K6-2|MIER3'] 126816 6642 VPSSSSFQ True PC9_epitope_Rep6 837.3868474808901 837.38574993586 34.277 2 -0.5371491302309555 0.15267449445531636 1.0 ['ENST00000256951.9_1_12:13371727-13371823:+|nuORF'] 42009 12084 IEDQHRNP True H1975_Epitope_Rep3 1007.4784564499499 1007.47734993586 51.645 2 -0.5371520565757589 0.15267449445531636 1.0 ['ENSG00000198342|ENST00000242804|ZNF442', 'nc|ENSG00000198342|Q9H7R0-2|ZNF442', 'ENST00000462995.1_19:12462822-12476430:-|nuORF'] 72136 19266 MREREREQRWR True PC9_epitope_Rep1 1630.8222744337397 1630.8206249037898 78.909 3 -0.5371655267802494 0.15268333251797858 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 139568 11982 YTNIQETYF True PC9_epitope_Rep1 1177.52915461013 1177.52804993586 50.951 2 -0.5371733657337692 0.15268333251797858 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 33513 16391 GLHGEFGL True PC9_epitope_Rep1 828.4130026590799 828.41190993586 67.87 2 -0.537185169729795 0.15268333251797858 1.0 ['ENSG00000164692|ENST00000297268|COL1A2', 'ENST00000488298.5_1_7:94043536-94045869:+|nuORF', 'ENST00000473573.5_1_7:94043536-94051279:+|nuORF'] 70322 16722 LYPKTLFLL True NCI_RA007_Epitope_Rep5 1106.67396836902 1106.67286993586 71.085 2 -0.5372473249400382 0.15268967991259966 1.0 ['nc|ENSG00000138814|Q08209-5|PPP3CA', 'nc|ENSG00000138814|Q08209-3|PPP3CA', 'nc|ENSG00000138814|Q08209-2|PPP3CA', 'ENSG00000138814|ENST00000394854|PPP3CA'] 115925 23873 TVPLDLLLVP True PC9_epitope_Rep3 1078.66379760814 1078.66327496793 97.115 1 -0.5372740160128016 0.15268967991259966 1.0 ['ENST00000501133.2_1_4:103749296-103764608:+|nuORF'] 82092 11306 PTAAAAPMSTV True PC9_epitope_Rep2 1015.5008316873101 1015.49972993586 48.811 2 -0.5373195614044989 0.15268967991259966 1.0 ['ENST00000261318.4_1_12:117155661-117158219:-|nuORF'] 123437 7734 VIEHPEYGEVI True PC9_epitope_Rep1 1283.6397676882698 1283.63812490379 34.57 3 -0.5373263956336616 0.15268967991259966 1.0 ['ENST00000487533.1_1_2:9411463-9411580:-|nuORF', 'ENST00000462917.1_1_17:39846204-39847075:+|nuORF', 'ENST00000310837.8_1_17:39845180-39847075:+|nuORF', 'ENST00000488260.1_1_3:40351432-40353086:+|nuORF', 'ENSG00000173812|ENST00000469257|EIF1', 'ENSG00000114784|ENST00000232905|EIF1B'] 14024 6849 DSAEHDCSP True NCI_RA007_Epitope_Rep3 959.32907490459 959.32796993586 34.053 2 -0.537374756187292 0.15274992254887573 1.0 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1'] 7770 3092 ASVLDALDPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 16.295 2 -0.5373794818231569 0.15274992254887573 1.0 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 55883 11704 LDGAGLMGFVP True PC9_epitope_Rep1 1075.53721719603 1075.5361099358602 49.894 2 -0.5374119992848833 0.15276373715962824 1.0 ['ENSG00000197859|ENST00000651351|ADAMTSL2'] 16890 9750 EFYRDKKY True H1975_Epitope_Rep3 1147.5662088251897 1147.5651099358602 42.527 2 -0.537438085371926 0.15277755131988716 1.0 ['nc|ENSG00000083454|Q93086|P2RX5', 'ENST00000549063.1_1_17:3579619-3585278:-|nuORF', 'nc|ENSG00000083454|Q93086-2|P2RX5', 'nc|ENSG00000083454|Q93086-5|P2RX5', 'nc|ENSG00000083454|Q93086-1|P2RX5', 'ENSG00000083454|ENST00000225328|P2RX5', 'nc|ENSG00000083454|Q93086-4|P2RX5'] 48757 3919 KEQEWDPQK True H1975_Epitope_Rep2 1186.5618517207397 1186.56019490379 20.123 3 -0.5375164598195207 0.1527952133296379 1.0 ['ENSG00000077274|ENST00000324068|CAPN6'] 12567 9701 DLDLFPTP True H1975_Epitope_Rep3 916.45419876472 916.45310993586 42.337 2 -0.5375275657192751 0.1527952133296379 1.0 ['ENST00000494089.1_1_2:129047366-129076044:-|nuORF', 'ENSG00000136720|ENST00000259241|HS6ST1'] 115444 9554 TVFLRKRSQWW True NCI_RA007_Epitope_Rep5 1505.82555182569 1505.8239149037902 43.387 3 -0.5375306693798119 0.1527952133296379 1.0 ['ENST00000267838.6_1_15:52016999-52017185:-|nuORF'] 82387 13225 PTWERRLRWE True NCI_RA007_Epitope_Rep1 1427.7422161245497 1427.74110993586 55.44 2 -0.537566619947405 0.1527952133296379 1.0 ['ENST00000564526.1_1_16:85009951-85010841:-|nuORF', 'ENSG00000153786|ENST00000313732|ZDHHC7', 'nc|ENSG00000153786|Q9NXF8-2|ZDHHC7'] 98448 11613 SIIYFTEHSP True NCI_RA007_Epitope_Rep2 1192.57643915572 1192.57534993586 49.764 2 -0.5375885037840089 0.1527952133296379 1.0 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 106225 2758 SVPPAAEPVP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 14.692 2 -0.5375906268968781 0.1527952133296379 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 46528 7921 ITQIEHEVSSS True PC9_epitope_Rep5 1228.5935457718401 1228.59244993586 35.408 2 -0.5376134097367207 0.1528090254002413 1.0 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 37166 7639 GVTLKFQIKP True NCI_RA007_Epitope_Rep4 1129.68593003505 1129.68427490379 36.037 3 -0.5377093938789547 0.15286426917935508 1.0 ['nc|ENSG00000220201|P0C6A0-1|ZGLP1', 'ENSG00000220201|ENST00000707000|ZGLP1'] 74286 14504 NIINSSAC True NCI_RA007_Epitope_Rep1 820.3749028982 820.37435496793 60.463 1 -0.5377349521700375 0.15286426917935508 1.0 ['ENST00000449959.6_1_12:10131945-10147620:+|nuORF'] 98603 11233 SINQENFEL True PC9_epitope_Rep3 1092.50875351872 1092.5076499358602 48.217 2 -0.5377524674273605 0.15286426917935508 1.0 ['ENST00000512630.5_1_4:143007384-143094853:-|nuORF', 'ENSG00000109452|ENST00000262992|INPP4B', 'INPP4B|p.L777V|2|0.12|ENSG00000109452|chr4:142108138-142108138|G/C|missense_variant'] 134157 14134 WRIKVWARVMT True NCI_RA007_Epitope_Rep2 1444.81254461384 1444.81144993586 59.641 2 -0.5377579624153226 0.15286426917935508 1.0 ['nc|ENSG00000167646|Q8N9W5-6|DNAAF3', 'nc|ENSG00000167646|Q8N9W5-3|DNAAF3'] 78461 6900 PDAGRRCRR True NCI_RA007_Epitope_Rep1 1085.56247794077 1085.56138993586 30.842 2 -0.5378077389073853 0.1529106825554668 1.0 ['ENST00000478324.5_1_11:532391-532556:-|nuORF'] 60821 24077 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 99.139 3 -0.5378787888563271 0.15293580673556548 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 57639 9359 LELVEKLYP True H1975_Epitope_Rep3 1102.6274120994199 1102.62630993586 40.999 2 -0.5378799880489459 0.15293580673556548 1.0 ['ENST00000472394.2_1_10:70143908-70166946:-|nuORF', 'nc|ENSG00000204130|Q8WXA3-5|RUFY2', 'nc|ENSG00000204130|Q8WXA3-4|RUFY2', 'ENSG00000204130|ENST00000602465|RUFY2', 'nc|ENSG00000204130|Q8WXA3-3|RUFY2', 'nc|ENSG00000204130|Q8WXA3-1|RUFY2'] 36625 17302 GVLLRRCLRNE True PC9_epitope_Rep4 1327.7506726332697 1327.7490149037899 74.554 3 -0.5378831748804659 0.15293580673556548 1.0 ['ENST00000528614.1_1_11:111285201-111285411:-|nuORF'] 109757 13195 THIFTSDGL True PC9_epitope_Rep4 989.4818104948899 989.48070993586 58.652 2 -0.5379391900208235 0.15294961448807604 1.0 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 44383 17112 INDVKELIEEK True H1975_Epitope_Rep1 1328.71874628496 1328.7176499358602 71.252 2 -0.5379968061684856 0.15299602269022625 1.0 ['ENSG00000109576|ENST00000337664|AADAT', 'nc|ENSG00000109576|Q8N5Z0-2|AADAT'] 59274 12855 LGGSLTVLP True PC9_epitope_Rep1 855.50656869075 855.50546993586 54.321 2 -0.5380223209725672 0.1530073349633252 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'RREB1|p.A584Gfs*8|1|0.14|ENSG00000124782|chr6:7229846-7229847|-/G|frameshift_variant'] 60819 23902 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 98.451 3 -0.5380227785613568 0.1530073349633252 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 44111 14079 ILNFINGSIV True NCI_RA007_Epitope_Rep5 1088.62299542532 1088.62188993586 60.842 2 -0.5380651752366346 0.15303744030252156 1.0 ['IMPG2|p.R955I|1|0.39|ENSG00000081148|chr3:101242846-101242846|C/A|missense_variant'] 33111 7350 GKKSGFVN True NCI_RA007_Epitope_Rep4 835.45520182423 835.45410993586 34.912 2 -0.5380920011361089 0.15304625615281808 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 60818 23816 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 98.112 3 -0.5380937269770619 0.15304625615281808 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 53316 23633 KTNLRRTTYL True PC9_epitope_Rep3 1264.72516907808 1264.7240699358601 96.192 2 -0.5381040358682821 0.15304625615281808 1.0 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF', 'ENST00000581551.1_1_17:62499042-62499524:-|nuORF', 'ENST00000583894.1_1_17:62499293-62499524:-|nuORF'] 68292 11441 LTRLVRAL True PC9_epitope_Rep2 940.6181848283999 940.61708993586 49.328 2 -0.5381669147377386 0.15307635889495558 1.0 ['ENSG00000104899|ENST00000221496|AMH'] 129089 7981 VTASTAVAVT True PC9_epitope_Rep1 918.5022115863 918.50110993586 35.521 2 -0.5381809023120157 0.15308766725882947 1.0 ['nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-4|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-6|CACNA2D4', 'ENSG00000151062|ENST00000382722|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-5|CACNA2D4', 'ENST00000280663.12_1_12:1909550-1953688:-|nuORF'] 68227 6145 LTQQCSTAK True H1975_Epitope_Rep3 978.4804305959 978.47932993586 28.647 2 -0.5382070561807718 0.15308766725882947 1.0 ['ENST00000453612.1_1_7:43810757-43831091:+|nuORF'] 60816 23639 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 97.422 3 -0.5382381352568155 0.15309281710337636 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 15654 16093 ECDDCDSC True PC9_epitope_Rep1 888.1935696015601 888.19246993586 66.718 2 -0.5383002275104664 0.15309281710337636 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 71675 20790 MLTRPRCVP True PC9_epitope_Rep1 1071.5681404848299 1071.56704993586 84.799 2 -0.5383278606675649 0.15309281710337636 1.0 ['nc|ENSG00000108849|P01298-2|PPY'] 2321 4220 AEQAERYDEM-[Oxidation] True H1975_Epitope_Rep2 1256.49793151528 1256.4968299358602 21.34 2 -0.538358527925931 0.15309281710337636 1.0 ['ENSG00000108953|ENST00000264335|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 6992 7147 AQQGHRKS True PC9_epitope_Rep3 910.47331149986 910.47220993586 32.504 2 -0.5383594065026399 0.15309281710337636 1.0 ['ENST00000409858.7_1_9:139977740-139977932:+|nuORF'] 30220 7510 FYYSPSGK True NCI_RA007_Epitope_Rep2 947.4388830537498 947.43778993586 33.837 2 -0.5383627990469216 0.15309281710337636 1.0 ['ENSG00000071655|ENST00000434436|MBD3'] 77896 15666 PAGVTLQTL True PC9_epitope_Rep5 898.51238234718 898.51128993586 65.271 2 -0.538377619466442 0.15309281710337636 1.0 ['STON1-GTF2A1L|p.V832L|1|0.44|ENSG00000068781|chr2:48645111-48645111|G/T|missense_variant'] 58236 6544 LESVVDHP True H1975_Epitope_Rep3 894.4446967101799 894.44358993586 30.139 2 -0.5384406661201578 0.15309281710337636 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant', 'ZDBF2|p.I1094Nfs*14|1|0.39|ENSG00000204186|chr2:206307801-206307802|-/A|frameshift_variant'] 82459 16181 PVDNLVIK True PC9_epitope_Rep3 896.53311779176 896.53256496793 67.378 1 -0.5384817234054399 0.15309281710337636 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 18257 7987 EISRIEKEYQV True PC9_epitope_Rep4 1392.72489429456 1392.7232549037901 38.169 3 -0.5385065930082061 0.15309281710337636 1.0 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 122279 8604 VGRSFEPIIK True NCI_RA007_Epitope_Rep2 1144.6604435631998 1144.65880490379 38.113 3 -0.5385167422100221 0.15309281710337636 1.0 ['nc|ENSG00000179988|Q8IV42-2|PSTK'] 96868 9664 SESSEEEEEP True H1975_Epitope_Rep3 1150.41497227318 1150.41386993586 42.191 2 -0.5385629650126826 0.15315051082758957 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 80701 11113 PLPVPPPTG True PC9_epitope_Rep6 873.49600400705 873.49490993586 53.684 2 -0.5385770702855647 0.15315051082758957 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 49070 18431 KFRKYREHHKD True H1975_Epitope_Rep3 1542.8167780471397 1542.81568993586 77.271 2 -0.5386145804768562 0.15315051082758957 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|22|1|sense'] 125225 13067 VLQQSVLSV True PC9_epitope_Rep6 971.5651461960299 971.56404993586 61.869 2 -0.5387822759672379 0.1531968976080297 1.0 ['ENST00000522380.2_1_5:170346486-170397534:+|nuORF'] 67914 23125 LTLDTSLIP True PC9_epitope_Rep4 971.55391280599 971.5533649679301 97.169 1 -0.5388293650873981 0.1532269890668535 1.0 ['ENSG00000164082|ENST00000395052|GRM2', 'ENST00000296479.9_1_3:51747995-51752125:+|nuORF'] 43758 11297 IIWQAFVP True PC9_epitope_Rep2 972.5432885526399 972.54218993586 48.777 2 -0.5388600265812622 0.15324078600058658 1.0 ['GRM1|p.L799Q|1|0.15|ENSG00000152822|chr6:146399435-146399435|T/A|missense_variant'] 25982 13173 FGYPKFISHQD True PC9_epitope_Rep4 1337.6404363946099 1337.6393299358601 58.568 2 -0.5388794646659433 0.15327087576374746 1.0 ['nc|ENSG00000076604|Q9BUZ4-2|TRAF4', 'ENSG00000076604|ENST00000262395|TRAF4'] 135936 9569 YEWWFRWRLDR True H1975_Epitope_Rep1 1711.8371791385496 1711.8360899358602 41.73 2 -0.5388877049339889 0.15328467153284672 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 93106 24218 RRRPHLFRRHF True PC9_epitope_Rep5 1576.9075991705602 1576.9065099358602 98.158 2 -0.5389792934963539 0.1533147596005018 1.0 ['HNRNPDL|p.D84H|1|0.31|ENSG00000152795|chr4:82429441-82429441|C/G|missense_variant'] 63756 19367 LPRQVELL True PC9_epitope_Rep1 966.5862159937799 966.58510993586 79.302 2 -0.5390562589583947 0.15334234836018834 1.0 ['nc|ENSG00000113108|O95704-3|APBB3', 'nc|ENSG00000113108|O95704-2|APBB3', 'ENSG00000113108|ENST00000357560|APBB3', 'nc|ENSG00000113108|O95704-4|APBB3', 'ENST00000515056.5_1_5:139938172-139941333:-|nuORF', 'ENST00000509914.5_1_5:139938172-139941496:-|nuORF'] 116112 11122 TVSPASLLT True NCI_RA007_Epitope_Rep5 887.49639792987 887.49530993586 49.417 2 -0.5390578062824835 0.15334234836018834 1.0 ['nc|ENSG00000224975|O15225|INE1'] 60815 22579 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 93.288 3 -0.5391033292111657 0.1533561420658195 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 115887 21109 TVPDLLLPL True PC9_epitope_Rep6 979.59538369515 979.59428993586 94.032 2 -0.5391682693385508 0.15338622700835763 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'ENST00000535958.1_1_12:6443054-6450989:-|nuORF', 'ENST00000538363.1_1_12:6443236-6450989:-|nuORF', 'nc|ENSG00000067182|P19438-5|TNFRSF1A', 'nc|ENSG00000067182|P19438-4|TNFRSF1A'] 9359 16602 AVTTAVQELLR True PC9_epitope_Rep3 1199.68738658703 1199.68573490379 68.997 3 -0.5392153560206621 0.1534301027971914 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 115867 18247 TVNSVEEKI True PC9_epitope_Rep2 1017.53423999057 1017.53314993586 75.507 2 -0.5392181231692875 0.1534301027971914 1.0 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF', 'ENST00000585799.5_1_19:11132109-11172489:+|nuORF', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4'] 42136 5901 IEERNERLKE True H1975_Epitope_Rep2 1314.6891774921799 1314.68752490379 27.685 3 -0.5392529974239489 0.15347647595464617 1.0 ['ENST00000520274.1_1_5:159466162-159492069:+|nuORF', 'ENSG00000113312|ENST00000231238|TTC1'] 93264 18218 RRRRVPGRE True NCI_RA007_Epitope_Rep4 1180.7013543720798 1180.70024993586 78.826 2 -0.5393452434838302 0.1534902663517146 1.0 ['ENST00000354336.7_1_22:21271864-21272434:+|nuORF'] 55298 13071 LARLARASI True PC9_epitope_Rep1 969.6083484206899 969.60724993586 55.145 2 -0.5393705263341584 0.15350405629948197 1.0 ['ENST00000440915.1_1_8:100245318-100245837:-|nuORF'] 126722 17224 VPRRDFEMQEK True H1975_Epitope_Rep3 1433.7085330377697 1433.70742993586 71.894 2 -0.5396211648016958 0.15367824330488045 1.0 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'ENST00000565339.5_1_16:67848301-67859829:+|nuORF', 'ENST00000487120.5_1_16:67848301-67859829:+|nuORF', 'ENST00000466164.5_1_16:67840937-67859829:+|nuORF'] 60822 23670 LKKKKKKKKK True H1975_Epitope_Rep3 1283.94929578683 1283.9476649037902 98.73 3 -0.5396272305962692 0.15367824330488045 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 37328 6547 GVVTRLRVP True NCI_RA007_Epitope_Rep1 995.6239984848298 995.62290993586 29.481 2 -0.5396385302002368 0.15370581527936145 1.0 ['ENST00000512916.2_1_12:54330967-54333404:-|nuORF'] 71299 16210 MHAGSLLL True PC9_epitope_Rep5 840.45275929608 840.45166993586 67.344 2 -0.5396688508200918 0.15370581527936145 1.0 ['ENSG00000153201|ENST00000283195|RANBP2', 'ENSG00000196862|ENST00000408999|RGPD4', 'nc|ENSG00000187627|P0DJD0|RGPD1', 'ENSG00000187627|ENST00000641458|RGPD1', 'ENSG00000185304|ENST00000398146|RGPD2'] 103085 8974 SQLKKFYNQ True PC9_epitope_Rep6 1154.6084079903399 1154.60730993586 44.534 2 -0.5397013472863275 0.1537471698727868 1.0 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.H695Tfs*6|1|0.19|ENSG00000151655|chr10:7738744-7738745|-/A|frameshift_variant', 'ITIH2|p.T482M|1|0.08|ENSG00000151655|chr10:7730117-7730117|C/T|missense_variant'] 140692 9223 YYQDTPKQI True PC9_epitope_Rep3 1154.5607890915799 1154.5596899358602 40.415 2 -0.539718627452406 0.1537471698727868 1.0 ['ENSG00000048162|ENST00000614830|NOP16', 'KIAA1191-NOP16|4|fusion', 'KIAA1191-NOP16|3|fusion'] 28893 17427 FTDVYNFEFED True PC9_epitope_Rep1 1424.5772270013597 1424.57612993586 71.829 2 -0.5397392955593793 0.1537471698727868 1.0 ['ENSG00000179630|ENST00000325686|LACC1'] 20405 9917 EPLVLDGK True PC9_epitope_Rep2 869.4858332461699 869.48472993586 43.478 2 -0.5398143911654565 0.15375344072185937 1.0 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2'] 4658 13600 ALCQLDQG True H1975_Epitope_Rep1 846.3905529623398 846.39000496793 57.441 1 -0.5398450301521022 0.15375344072185937 1.0 ['ENST00000476102.1_1_1:159898784-159904055:-|nuORF'] 82224 18129 PTIIPAPPTF True NCI_RA007_Epitope_Rep3 1052.5906326678798 1052.5895299358601 79.433 2 -0.5398890427156846 0.15375344072185937 1.0 ['ZNF804B|p.H1259P|1|0.07|ENSG00000182348|chr7:89336758-89336758|A/C|missense_variant'] 120186 19537 VFLKPWIF True PC9_epitope_Rep6 1048.6109741896398 1048.6098699358602 87.813 2 -0.5399023555864949 0.15375344072185937 1.0 ['nc|ENSG00000167920|Q8N816-2|KRT10-AS1', 'nc|ENSG00000167920|Q8N816|KRT10-AS1'] 18692 6769 ELDDPGQPVS True PC9_epitope_Rep1 1055.4771190372699 1055.4760299358602 30.843 2 -0.5399114544744472 0.15376722368806803 1.0 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 79913 9766 PINSPELLQAK True H1975_Epitope_Rep3 1208.6764875501601 1208.67538993586 42.589 2 -0.5401181397190638 0.15387622149837132 1.0 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3'] 69258 24090 LVPAMLWGL True PC9_epitope_Rep2 998.5623097450599 998.56120993586 98.164 2 -0.5401291274612023 0.15387622149837132 1.0 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 79593 12399 PGVLKVVS True PC9_epitope_Rep3 797.50108938749 797.49998993586 52.721 2 -0.540168436967245 0.15390378163577734 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 19391 5120 ELPAFQEWP True NCI_RA007_Epitope_Rep2 1115.52876068731 1115.52766993586 24.54 2 -0.5402000769316957 0.15390378163577734 1.0 ['ENST00000394708.6_1_4:107237221-107237419:-|nuORF'] 70262 8590 LYNKVSQFP True NCI_RA007_Epitope_Rep1 1094.5760452329 1094.57494993586 37.417 2 -0.5403789446064232 0.1539639111458537 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 119516 18563 VEQRDSLVAL True PC9_epitope_Rep2 1128.6138872935999 1128.61278993586 76.754 2 -0.5404080463474393 0.1539639111458537 1.0 ['ENSG00000243156|ENST00000441493|MICAL3', 'ENST00000252134.11_1_22:18273500-18274125:-|nuORF'] 92319 5630 RQLREYQEL True NCI_RA007_Epitope_Rep5 1233.6465844042098 1233.64492490379 28.343 3 -0.5404510545430411 0.1539776891132644 1.0 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.N379T|1|0.24|ENSG00000170421|chr12:52898745-52898745|T/G|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9NSB2', 'CON__H-INV:HIT000292931'] 60860 7190 LKMKSPLCT True PC9_epitope_Rep5 1019.55075908519 1019.54966993586 32.621 2 -0.540520655056771 0.15400775168550304 1.0 ['ENSG00000198786|ENST00000361567|MT-ND5'] 107832 7730 TARCCDLP True H1975_Epitope_Rep3 877.3786083796499 877.37750993586 34.716 2 -0.5405397861947759 0.15403781327861643 1.0 ['nc|ENSG00000143369|Q16610-2|ECM1', 'ENSG00000143369|ENST00000369047|ECM1', 'nc|ENSG00000143369|Q16610-4|ECM1'] 37670 5461 HAIESLLQ True NCI_RA007_Epitope_Rep1 909.49198125577 909.49088993586 25.313 2 -0.5406005859511401 0.15408415841584158 1.0 ['ENSG00000121542|ENST00000492595|SEC22A'] 33851 18544 GLVLSLEEQL True PC9_epitope_Rep2 1099.61249031127 1099.6119749679299 76.681 1 -0.5406308507961171 0.15413050204367437 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 100284 15626 SLLSQQPFL True PC9_epitope_Rep3 1031.56514619603 1031.56404993586 65.253 2 -0.5407013458895173 0.15416056016935353 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'nc|ENSG00000144893|Q86YW9-4|MED12L', 'nc|ENSG00000144893|Q86YW9|MED12L', 'ENSG00000144893|ENST00000687756|MED12L'] 66522 10543 LSSENNPLVQ True H1975_Epitope_Rep1 1099.5509526838698 1099.54984993586 45.508 2 -0.5407499114893454 0.15417433358844507 1.0 ['ENSG00000198796|ENST00000361673|ALPK2', 'ALPK2|p.I1792Nfs*4|1|0.28|ENSG00000198796|chr18:58529217-58529218|-/T|frameshift_variant', 'ALPK2|p.G1434Vfs*29|1|0.39|ENSG00000198796|chr18:58535886-58535886|C/-|frameshift_variant'] 79594 10171 PGVLKVVS True PC9_epitope_Rep6 797.50108938749 797.49998993586 49.753 2 -0.540794510671047 0.15418308528999902 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1'] 48038 6784 KALKETRRNL True NCI_RA007_Epitope_Rep2 1227.7411534953899 1227.73951490379 31.005 3 -0.5407945612637577 0.15418308528999902 1.0 ['ENST00000571995.5_1_17:80615490-80615769:-|nuORF'] 12403 3638 DKEQKQTNTDK True NCI_RA007_Epitope_Rep2 1333.6473722498497 1333.6462699358601 18.802 2 -0.5408040300535135 0.15418308528999902 1.0 ['THRAP3|p.T757Nfs*6|1|0.26|ENSG00000054118|chr1:36296730-36296731|-/A|frameshift_variant', 'ENSG00000054118|ENST00000354618|THRAP3'] 63339 11297 LPEHLKAK True PC9_epitope_Rep4 934.5600012459399 934.55890993586 51.231 2 -0.540833865427691 0.1542131401123504 1.0 ['nc|ENSG00000115525|Q9UNP4-2|ST3GAL5', 'nc|ENSG00000115525|Q9UNP4-3|ST3GAL5', 'ENSG00000115525|ENST00000638572|ST3GAL5'] 55687 15551 LDCHISICSP True PC9_epitope_Rep5 1086.48380172418 1086.4827099358602 64.827 2 -0.5408637447683479 0.15422691155399246 1.0 ['ENSG00000145191|ENST00000648915|EIF2B5', 'ENST00000481054.5_1_3:183853173-183856676:+|nuORF', 'ENST00000479833.1_1_3:183855956-183859823:+|nuORF', 'ENST00000491144.5_1_3:183855641-183858240:+|nuORF', 'ENST00000468748.5_1_3:183855785-183858017:+|nuORF'] 16490 4641 EEMLENAKWE True H1975_Epitope_Rep2 1277.5598031154097 1277.55814490379 22.951 3 -0.5409064859765506 0.1542406825471775 1.0 ['ENST00000464884.1_1_3:155830239-155830734:-|nuORF'] 120238 4839 VFNQQAHL True NCI_RA007_Epitope_Rep5 955.4875645816699 955.48646993586 25.305 2 -0.5409246830989641 0.15425445309192745 1.0 ['ENST00000474037.5_1_19:53886174-53886573:+|nuORF', 'nc|ENSG00000198538|P17035-2|ZNF28', 'ENSG00000198538|ENST00000457749|ZNF28', 'ENSG00000213799|ENST00000458035|ZNF845'] 93319 9147 RRSKETEVFY True H1975_Epitope_Rep1 1313.6727991520497 1313.67170993586 40.09 2 -0.5409394114002365 0.15426822318826422 1.0 ['ENSG00000116016|ENST00000263734|EPAS1', 'ENST00000467888.5_1_2:46525050-46574567:+|nuORF'] 100130 9031 SLLDGTLLDCT True PC9_epitope_Rep1 1149.55874048625 1149.5576499358601 39.588 2 -0.5409586990424178 0.1542819928362097 1.0 ['FKBP9|p.S408C|1|0.11|ENSG00000122642|chr7:32996346-32996346|C/G|missense_variant'] 758 5059 AAVSGALRWSR True NCI_RA007_Epitope_Rep3 1172.64143945412 1172.63980490379 26.893 3 -0.5410305532375722 0.15434460526530014 1.0 ['ENST00000289431.9_1_20:48525041-48531957:-|nuORF'] 59293 17439 LGGWTKDDDVP True PC9_epitope_Rep1 1201.5615173675699 1201.5604299358602 71.877 2 -0.541088872260834 0.15439093484419264 1.0 ['nc|ENSG00000198682|O95340|PAPSS2', 'ENSG00000198682|ENST00000456849|PAPSS2', 'ENSG00000138801|ENST00000265174|PAPSS1'] 58281 11816 LETEWELRQ True PC9_epitope_Rep2 1202.59315184902 1202.5920499358601 50.78 2 -0.5411091112740908 0.15440218806980985 1.0 ['nc|ENSG00000127463|Q8N766-4|EMC1', 'nc|ENSG00000127463|Q8N766-3|EMC1', 'nc|ENSG00000127463|Q8N766-2|EMC1', 'ENSG00000127463|ENST00000477853|EMC1', 'ENST00000467423.1_1_1:19566287-19566919:-|nuORF'] 59539 21984 LGQNERNVAI True PC9_epitope_Rep1 1112.59382055536 1112.59272993586 89.383 2 -0.5411102632295979 0.15440218806980985 1.0 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 99806 13179 SLGSLNSLACL True PC9_epitope_Rep1 1076.55359553616 1076.5524899358602 55.556 2 -0.5412200513808514 0.1544159544159544 1.0 ['nc|ENSG00000106100|Q9Y239-2|NOD1', 'nc|ENSG00000106100|Q9Y239-3|NOD1', 'ENSG00000106100|ENST00000222823|NOD1'] 106242 25064 SVPVVGTLRG True PC9_epitope_Rep3 983.5763795860698 983.5758349679301 101.76 1 -0.5412765239376423 0.15442972031387361 1.0 ['ENSG00000142698|ENST00000488417|C1orf94'] 58438 22772 LEWERQEIQRF True PC9_epitope_Rep1 1532.77357582248 1532.77246993586 92.401 2 -0.5412957075634776 0.15444097154392133 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 89297 5888 RELPPPPPP True H1975_Epitope_Rep2 998.5549158654999 998.55380993586 27.634 2 -0.5413012797953078 0.15444097154392133 1.0 ['ENSG00000187017|ENST00000645284|ESPN', 'nc|ENSG00000187017|B1AK53-2|ESPN'] 134207 15791 WRPRKFKMRQF True H1975_Epitope_Rep3 1578.8717908254596 1578.8706899358601 66.187 2 -0.5413246671969142 0.1544685007325411 1.0 ['ENSG00000144815|ENST00000273347|NXPE3'] 115972 9513 TVQEFWDENVP True H1975_Epitope_Rep3 1362.6091958359798 1362.60808993586 41.597 2 -0.5413399253057218 0.1544685007325411 1.0 ['nc|ENSG00000177300|Q8N7P3|CLDN22', 'ENSG00000185758|ENST00000541814|CLDN24'] 92601 4644 RREDWNNWWNR True NCI_RA007_Epitope_Rep4 1630.7501550393 1630.74850490379 24.28 3 -0.5414047380488023 0.15447974996744368 1.0 ['ENST00000580900.5_2_9:21802683-21815463:+|nuORF'] 99132 5017 SLAICHCVTP True H1975_Epitope_Rep3 1042.49397248506 1042.4928699358602 24.424 2 -0.5414151282095279 0.15447974996744368 1.0 ['ENST00000377710.9_1_20:17971363-17971543:+|nuORF'] 67946 13340 LTLLDLSSNKL True PC9_epitope_Rep6 1215.70745332527 1215.70579490379 62.972 3 -0.5414974604712722 0.15450979115459118 1.0 ['AMIGO1|p.V309Cfs*2|1|0.1|ENSG00000181754|chr1:109507988-109507988|C/-|frameshift_variant', 'ENSG00000181754|ENST00000369864|AMIGO1'] 120493 9339 VFVVGKMDGL True PC9_epitope_Rep5 1063.5736027047499 1063.5725099358601 40.876 2 -0.5415295055161611 0.15452355373246085 1.0 ['ENSG00000066084|ENST00000301180|DIP2B', 'nc|ENSG00000151240|Q9Y2E4-2|DIP2C', 'ENSG00000151240|ENST00000280886|DIP2C'] 103030 9436 SQKNWIKPP True NCI_RA007_Epitope_Rep1 1096.6029286870798 1096.60182993586 40.697 2 -0.5415969730246154 0.15453731586229347 1.0 ['ENST00000376511.6_1_6:30577702-30584281:-|nuORF'] 34320 11970 GPQTQLCI True PC9_epitope_Rep5 858.4269384710599 858.42584993586 51.038 2 -0.5416662255426935 0.1545785995637879 1.0 ['ENST00000489288.6_1_12:2986423-2994675:+|nuORF', 'ENST00000461997.5_1_12:2986378-2997084:+|nuORF', 'ENST00000538636.5_3_12:2986404-2994675:+|nuORF'] 1498 6439 AEENPSYK True H1975_Epitope_Rep3 936.41887588516 936.41776993586 29.745 2 -0.5416749390792305 0.1545785995637879 1.0 ['ENSG00000096433|ENST00000605930|ITPR3'] 129926 12459 VTLVVSNVS True PC9_epitope_Rep1 916.52294703088 916.52184993586 52.789 2 -0.5416791703302297 0.1545785995637879 1.0 ['ENST00000566733.2_1_6:3909509-3909881:-|nuORF'] 43838 15864 ILALYNTALKP True H1975_Epitope_Rep3 1215.72270946659 1215.7216099358602 66.469 2 -0.5416933458751578 0.15458732768021355 1.0 ['nc|ENSG00000016864|Q68CQ7-2|GLT8D1', 'ENST00000484163.5_1_3:52729811-52734476:-|nuORF', 'ENSG00000016864|ENST00000266014|GLT8D1'] 97101 13746 SFCIQPCVL True PC9_epitope_Rep5 1008.4772597917598 1008.47616993586 57.895 2 -0.5417086323483079 0.15458732768021355 1.0 ['LTR88b_dup1331|chr15:56885665-56885983:-|1.1762122002952204|0.0198811332927147|5.89|502.0|8|3|sense'] 98100 5504 SIADHVNSA True PC9_epitope_Rep1 912.4301092752 912.42900993586 26.001 2 -0.5417169390221425 0.15458732768021355 1.0 ['ENSG00000136874|ENST00000259400|STX17'] 124917 20009 VLLSLYICL True PC9_epitope_Rep2 1035.60384020387 1035.6027499358602 82.369 2 -0.5417565443491207 0.15459857103331542 1.0 ['ENST00000609928.5_3_1:179821820-179834609:-|nuORF'] 84472 11013 QGLTANSL True PC9_epitope_Rep1 802.41848196234 802.41738993586 47.25 2 -0.541757200630772 0.15459857103331542 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 56248 11424 LDQANDVINK True PC9_epitope_Rep1 1128.5775017848798 1128.57640993586 48.821 2 -0.5417759123076276 0.15459974938566942 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000471314.1_1_9:100116971-100120019:+|nuORF'] 69257 24343 LVPAMLWGL True PC9_epitope_Rep1 998.5623097450599 998.56120993586 98.465 2 -0.5417834531460618 0.15459974938566942 1.0 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 100279 14427 SLLSHLWLA True PC9_epitope_Rep1 1038.58621599378 1038.5851099358601 60.317 2 -0.5417941405322818 0.15459974938566942 1.0 ['ENSG00000171451|ENST00000310045|DSEL'] 116345 14710 TVYDRTTVL True PC9_epitope_Rep2 1066.5658744720201 1066.56476993586 61.85 2 -0.5417961916991039 0.15459974938566942 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 58074 8541 LERQNQEYEIL True H1975_Epitope_Rep3 1433.7150578868498 1433.7134249037902 37.841 3 -0.5418556855796794 0.15459974938566942 1.0 ['ENSG00000196859|ENST00000355612|KRT39', 'CON__Q6IFU6'] 56648 5215 LEAAGDKF True H1975_Epitope_Rep1 849.42323298961 849.42212993586 25.123 2 -0.5418778704822178 0.15459974938566942 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 60012 25114 LHRFGRGL True NCI_RA007_Epitope_Rep1 954.5511678977398 954.55006993586 103.93 2 -0.542026821676109 0.15464605370219692 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 31700 13366 GEIIEKIRIGH True NCI_RA007_Epitope_Rep2 1263.72992010535 1263.7288299358602 56.63 2 -0.5420601656126272 0.1546572934973638 1.0 ['ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF', 'nc|ENSG00000167210|Q8IVV2-3|LOXHD1'] 90623 21853 RKKKLKKKKTL True NCI_RA007_Epitope_Rep5 1397.9922232279696 1397.99056490379 91.184 3 -0.5420695457025615 0.1546572934973638 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 60013 24530 LHRFGRGL True NCI_RA007_Epitope_Rep2 954.5511678977398 954.55006993586 103.04 2 -0.5421647452027726 0.15471734956227423 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 60011 24925 LHRFGRGL True NCI_RA007_Epitope_Rep1 954.5511678977398 954.55006993586 103.16 2 -0.5421879729448197 0.15471734956227423 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 55372 20149 LASNVIC[Carbamidomethyl]P True PC9_epitope_Rep3 872.44258881463 872.44203496793 82.757 1 -0.542238152963677 0.1547260686333534 1.0 ['OR9G1|p.A215Gfs*50|1|0.15|ENSG00000174914|chr11:56701027-56701028|-/T|frameshift_variant', 'ENSG00000174914|ENST00000642097|OR9G1'] 60014 26082 LHRFGRGL True PC9_epitope_Rep1 954.5511678977398 954.55006993586 105.58 2 -0.5422403276246209 0.1547260686333534 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 110502 7834 TIQEELNNK True H1975_Epitope_Rep1 1087.5509526838698 1087.54984993586 35.086 2 -0.5422516154638899 0.1547260686333534 1.0 ['ENSG00000120658|ENST00000690772|ENOX1'] 93317 10333 RRSARWPWPER True H1975_Epitope_Rep3 1495.7908976524698 1495.78924490379 44.798 3 -0.5422931479171776 0.1547723648670637 1.0 ['HTR1A|p.V295Cfs*50|2|0.23|ENSG00000178394|chr5:63960837-63960837|C/-|frameshift_variant'] 133389 9700 WFREFWEQRFR True H1975_Epitope_Rep1 1685.82152907441 1685.8204299358601 42.236 2 -0.5423211278042825 0.15478611757431784 1.0 ['ENSG00000164082|ENST00000395052|GRM2'] 60010 24907 LHRFGRGL True H1975_Epitope_Rep3 954.5511678977398 954.55006993586 103.61 2 -0.5423438383963676 0.1548136216462472 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 78330 15869 PASSSTKLL True PC9_epitope_Rep5 902.50729696674 902.50618993586 66.032 2 -0.542363523245707 0.1548136216462472 1.0 ['ENSG00000102313|ENST00000218436|ITIH6'] 67004 6704 LTAIGDKN True PC9_epitope_Rep1 830.44978209062 830.44868993586 30.591 2 -0.5423807344243758 0.15482737301096614 1.0 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 38957 21780 HITDIPIIM True PC9_epitope_Rep5 1051.5736027047499 1051.5725099358601 88.808 2 -0.5424203707830482 0.15485487439802162 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant'] 41707 15857 IDLRTNVL True PC9_epitope_Rep1 942.5498304850599 942.54872993586 65.806 2 -0.542451734858076 0.15485487439802162 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 28286 4784 FRWIDWERLER True NCI_RA007_Epitope_Rep2 1604.8211947212396 1604.81901987172 23.239 4 -0.5425731162374974 0.15488489384202392 1.0 ['ENSG00000126583|ENST00000263431|PRKCG', 'nc|ENSG00000126583|P05129-2|PRKCG'] 3827 6440 AGWEDWILQWK True NCI_RA007_Epitope_Rep2 1430.6982856239 1430.69665490379 29.657 3 -0.5426777034019199 0.15489108331028648 1.0 ['ENST00000529308.5_2_11:77900012-77900084:+|nuORF'] 87770 5232 QVGQHIEVDP True H1975_Epitope_Rep3 1120.5512870370399 1120.55018993586 25.21 2 -0.5427266218222163 0.15489108331028648 1.0 ['ENSG00000159459|ENST00000290650|UBR1', 'UBR1-TGM5|1|fusion', 'nc|ENSG00000159459|Q8IWV7-2|UBR1', 'UBR1-TGM5|2|fusion', 'UBR1-TGM5|3|fusion'] 25801 12147 FGAGLGGNVK True PC9_epitope_Rep4 918.49231560894 918.49120993586 54.54 2 -0.5427283543850566 0.15489108331028648 1.0 ['ENSG00000262152|ENST00000573315|GREP1'] 15697 10330 ECWRFFNRRTN True H1975_Epitope_Rep3 1527.7153497537097 1527.7142499358602 44.786 2 -0.5427473066654699 0.15489108331028648 1.0 ['ZNF215|p.G413W|1|0.05|ENSG00000149054|chr11:6956214-6956214|G/T|missense_variant'] 57273 9070 LEGEEEEEE True PC9_epitope_Rep1 1091.41424399719 1091.41314993586 39.739 2 -0.5428755535224369 0.15493736782170164 1.0 ['ENSG00000177432|ENST00000323061|NAP1L5'] 64631 21269 LRFPWQLV True PC9_epitope_Rep3 1057.6072857915299 1057.6061899358601 87.104 2 -0.5429034274153454 0.15498365082721935 1.0 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11'] 20449 15208 EPRLRLLPQSP True H1975_Epitope_Rep3 1304.75646920636 1304.75536993586 63.9 2 -0.5429952321833319 0.15501114310347633 1.0 ['ENST00000408912.7_1_16:31469417-31469621:+|nuORF'] 113946 2911 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 15.855 3 -0.5430287295157431 0.15501114310347633 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 43555 17969 IIEDSTDFF True PC9_epitope_Rep2 1085.49170647225 1085.4906099358602 74.421 2 -0.5430762290698873 0.1550248885707779 1.0 ['nc|ENSG00000136010|Q3SY69-3|ALDH1L2', 'ENSG00000136010|ENST00000258494|ALDH1L2'] 88149 21729 QWQRYQHQWQR True PC9_epitope_Rep4 1642.78654054802 1642.78544993586 91.774 2 -0.5431301430198712 0.15507116714111427 1.0 ['ENST00000577066.2_1_17:79004653-79005004:-|nuORF'] 104903 16891 STFPQFIKA True PC9_epitope_Rep4 1037.5545815123298 1037.5534899358602 72.955 2 -0.5431517954717646 0.1550773434831406 1.0 ['ENSG00000040487|ENST00000375153|SLC66A1'] 93045 1237 RRRHRLRHG True NCI_RA007_Epitope_Rep3 1242.7394712163 1242.73783490379 7.0384 3 -0.5431796463662568 0.1550773434831406 1.0 ['ENST00000542438.1_1_12:120972159-120972757:+|nuORF'] 112170 17840 TLVPASLFSL True PC9_epitope_Rep5 1046.6011973515801 1046.60010993586 73.639 2 -0.5431943923435301 0.1550773434831406 1.0 ['ENST00000451963.1_2_7:99818046-99818860:+|nuORF'] 20574 3729 EQECDVKDY True H1975_Epitope_Rep3 1127.4441046568297 1127.4430099358601 19.412 2 -0.5432087827578286 0.1550773434831406 1.0 ['ARG1|p.K41E|1|0.86|ENSG00000118520|chr6:131576726-131576726|A/G|missense_variant', 'ENST00000498260.1_1_6:131894422-131900432:+|nuORF', 'nc|ENSG00000118520|P05089-3|ARG1', 'ENSG00000118520|ENST00000368087|ARG1'] 136257 8891 YGRYDKTQL True PC9_epitope_Rep4 1142.5720224816198 1142.57038490379 41.731 3 -0.5432529428402608 0.15508856394658513 1.0 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF', 'ENST00000463392.5_1_2:172180771-172183527:-|nuORF', 'ENSG00000123600|ENST00000375258|METTL8', 'ENST00000464491.5_1_2:172180771-172182690:-|nuORF', 'ENST00000470773.1_1_2:172182447-172182657:-|nuORF'] 12551 11669 DLDDSDLP True PC9_epitope_Rep6 888.3712569864 888.37014993586 56.013 2 -0.5432685329718213 0.15508856394658513 1.0 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'ENST00000473813.1_1_21:40582792-40590527:-|nuORF'] 13441 4321 DNSVGAVASSA True NCI_RA007_Epitope_Rep5 976.44615326216 976.44504993586 23.223 2 -0.5433394917111581 0.15510230636609088 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 57641 8158 LELVRQAP True H1975_Epitope_Rep2 924.5392658013599 924.53816993586 36.331 2 -0.5433630914104479 0.15513231299708863 1.0 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 33760 5376 GLSLEQVKK True NCI_RA007_Epitope_Rep5 1000.5916952970399 1000.59058993586 27.368 2 -0.5434134631247391 0.15514605425801833 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000174437|P16615-5|ATP2A2', 'nc|ENSG00000174437|P16615-2|ATP2A2', 'nc|ENSG00000174437|P16615-3|ATP2A2', 'nc|ENSG00000174437|P16615-4|ATP2A2', 'ENSG00000174437|ENST00000539276|ATP2A2'] 55626 10729 LDAAEWLP True PC9_epitope_Rep3 913.4545331178899 913.45342993586 46.224 2 -0.5434743176787291 0.15514970157263902 1.0 ['ENST00000264258.7_1_2:101618763-101619227:+|nuORF'] 14723 8051 DVRRRYPHYP True H1975_Epitope_Rep1 1357.7003513125699 1357.69870490379 35.912 3 -0.5434856560408298 0.15514970157263902 1.0 ['nc|ENSG00000114923|P48751-2|SLC4A3', 'SLC4A3|p.A1138Qfs*10|1|0.11|ENSG00000114923|chr2:219640563-219640563|G/-|frameshift_variant', 'ENSG00000114923|ENST00000358055|SLC4A3', 'nc|ENSG00000114923|P48751-3|SLC4A3', 'ENST00000425141.5_1_2:220498093-220506447:+|nuORF'] 795 19323 ACFLGEIEV True PC9_epitope_Rep6 979.4684689298699 979.46736993586 86.974 2 -0.5434882398471763 0.15514970157263902 1.0 ['ENSG00000177409|ENST00000318238|SAMD9L'] 65288 9519 LSEKEKELENK True NCI_RA007_Epitope_Rep5 1345.7089098772497 1345.70780993586 43.25 2 -0.543493349535657 0.15514970157263902 1.0 ['CEP162|p.F640L|1|0.58|ENSG00000135315|chr6:84174832-84174832|G/C|missense_variant'] 61170 13094 LLDKYFGSV True NCI_RA007_Epitope_Rep3 1040.5542471591598 1040.5531499358601 58.786 2 -0.5434938000081271 0.15514970157263902 1.0 ['nc|ENSG00000182287|P56377|AP1S2', 'ENSG00000106367|ENST00000337619|AP1S1', 'ENSG00000182287|ENST00000672987|AP1S2', 'nc|ENSG00000182287|P56377-2|AP1S2', 'nc|ENSG00000106367|P61966-2|AP1S1', 'AP1S1|p.D122Gfs*18|1|0.31|ENSG00000106367|chr7:101159123-101159124|-/G|frameshift_variant'] 81126 5756 PPHPPPPPP True PC9_epitope_Rep3 931.49158733295 931.49048993586 27.212 2 -0.543519154405465 0.1551609178578979 1.0 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF', 'nc|ENSG00000048991|Q15032|R3HDM1', 'nc|ENSG00000048991|Q15032-3|R3HDM1', 'ENSG00000048991|ENST00000683871|R3HDM1', 'nc|ENSG00000048991|Q15032-2|R3HDM1', 'nc|ENSG00000048991|Q15032-4|R3HDM1', 'nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8', 'ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENSG00000163064|ENST00000295206|EN1'] 19081 14946 ELHLVHWNAVR True PC9_epitope_Rep4 1372.73640246812 1372.7353099358602 65.43 2 -0.5435352737653273 0.1551609178578979 1.0 ['ENSG00000169239|ENST00000318636|CA5B'] 102462 10359 SPYHYRLDW True H1975_Epitope_Rep3 1235.5723568347898 1235.5712499358601 44.901 2 -0.5435611301014839 0.15518082476909068 1.0 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 9244 6716 AVQNLQQHNLI True H1975_Epitope_Rep3 1276.6887835693599 1276.6876899358601 30.789 2 -0.5435702866625567 0.15518082476909068 1.0 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 31231 8257 GDLLNLDLGP True H1975_Epitope_Rep3 1025.53932537101 1025.53822993586 36.746 2 -0.5435914839959737 0.15518082476909068 1.0 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'ENST00000472057.1_1_22:29727525-29736761:-|nuORF', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 12916 10851 DLNDTFPEYK True NCI_RA007_Epitope_Rep2 1240.5611830144 1240.56008993586 46.812 2 -0.54360065389108 0.15518082476909068 1.0 ['ENST00000477618.1_1_9:74817496-74842957:+|nuORF', 'nc|ENSG00000119125|Q9Y2T3-2|GDA', 'ENSG00000119125|ENST00000358399|GDA', 'nc|ENSG00000119125|Q9Y2T3-3|GDA', 'ENST00000414671.1_1_9:74825668-74829777:+|nuORF'] 13759 12048 DQLSKLKDER True NCI_RA007_Epitope_Rep1 1230.65681473474 1230.6557099358602 50.852 2 -0.5436007534326106 0.15518082476909068 1.0 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 134005 13409 WPRLALPFST True NCI_RA007_Epitope_Rep5 1186.6498788794997 1186.6482449037899 58.263 3 -0.5437143806095585 0.1552382965576676 1.0 ['ENST00000344823.9_1_16:3451289-3451709:+|nuORF'] 54798 6863 LAEYQVRSIAS True PC9_epitope_Rep5 1235.65100107831 1235.64934490379 31.369 3 -0.5437219573448713 0.1552382965576676 1.0 ['ENST00000581477.1_1_17:61887859-61888617:+|nuORF'] 80278 7581 PLEAEFQRLP True NCI_RA007_Epitope_Rep1 1198.6346227381798 1198.63297490379 33.482 3 -0.5437283398609705 0.1552382965576676 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 66239 20195 LSPVLTEPHL True PC9_epitope_Rep5 1104.6179100448799 1104.6168099358601 82.726 2 -0.5438292055546198 0.15524950813807906 1.0 ['ENSG00000108950|ENST00000592554|FAM20A', 'ENST00000226094.9_1_17:66533620-66538255:-|nuORF'] 133731 22990 WLKRRIWRMP True PC9_epitope_Rep2 1440.82886338432 1440.82776993586 93.925 2 -0.5439046343289342 0.15524950813807906 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 35408 4665 GTDFCTSAK True NCI_RA007_Epitope_Rep5 928.3960322656 928.39492993586 24.628 2 -0.5439775243599486 0.15525819458896983 1.0 ['nc|ENSG00000143036|Q8N4M1-5|SLC44A3', 'nc|ENSG00000143036|Q8N4M1-4|SLC44A3', 'nc|ENSG00000143036|Q8N4M1-2|SLC44A3', 'nc|ENSG00000143036|Q8N4M1-3|SLC44A3', 'nc|ENSG00000143036|Q8N4M1-6|SLC44A3', 'ENSG00000143036|ENST00000271227|SLC44A3'] 83311 16090 QALLC[Carbamidomethyl]LTEL True PC9_epitope_Rep1 1059.5634322233 1059.5623299358601 66.707 2 -0.5439775254384264 0.15525819458896983 1.0 ['SNRPA1|p.P88L|1|0.22|ENSG00000131876|chr15:101292008-101292008|G/A|missense_variant'] 123106 7466 VHARTPHAE True H1975_Epitope_Rep2 1016.5151763118399 1016.51406993586 33.665 2 -0.5439807502779423 0.15525819458896983 1.0 ['nc|ENSG00000140945|P55290-5|CDH13', 'ENSG00000140945|ENST00000567109|CDH13', 'nc|ENSG00000140945|P55290-4|CDH13', 'ENST00000566333.1_1_16:82660697-83065865:+|nuORF', 'nc|ENSG00000140945|P55290-3|CDH13', 'nc|ENSG00000140945|P55290-2|CDH13'] 112812 5605 TPLSEWETER True H1975_Epitope_Rep3 1246.5829810881398 1246.58134490379 26.6 3 -0.5440124692263378 0.15525930742968622 1.0 ['ENST00000460725.5_1_2:113955061-113955313:+|nuORF'] 136173 19913 YGIENEVFL True PC9_epitope_Rep6 1082.52842633414 1082.5278749679298 89.25 1 -0.5440224624596012 0.15525930742968622 1.0 ['ENSG00000111716|ENST00000350669|LDHB', 'ENST00000542765.4_1_12:21788478-21790169:-|nuORF'] 14552 7073 DVDRERREHER True NCI_RA007_Epitope_Rep1 1495.7239998611096 1495.72234490379 31.506 3 -0.5440380259841125 0.15525930742968622 1.0 ['ENSG00000213923|ENST00000396832|CSNK1E'] 134600 14927 WWDIYYTLFEK True H1975_Epitope_Rep3 1562.7445671099797 1562.74346993586 62.804 2 -0.5440463416037705 0.15525930742968622 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 122957 4268 VGWGRAHRDA True NCI_RA007_Epitope_Rep5 1123.56352348659 1123.56187490379 22.99 3 -0.5440538063980124 0.15525930742968622 1.0 ['ENST00000393721.5_2_X:153172840-153173077:-|nuORF'] 45758 2957 ISNIEDLPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 15.617 2 -0.5440615303612913 0.15525930742968622 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 121259 9471 VGGTVLNVS True PC9_epitope_Rep3 844.4654321547599 844.46432993586 41.381 2 -0.5441469739246093 0.1552892978491652 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 1053 9199 AEAIQTPLKSA True H1975_Epitope_Rep1 1127.61863832087 1127.61754993586 40.291 2 -0.5441833815437495 0.1553030303030303 1.0 ['ENSG00000134690|ENST00000373055|CDCA8'] 9092 16665 AVLDRNVAI True PC9_epitope_Rep1 969.5607295219299 969.55962993586 68.93 2 -0.544233785282697 0.1553330190366264 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 58989 17812 LGAFRRKFI True PC9_epitope_Rep3 1106.6712830304198 1106.6701899358602 73.711 2 -0.5443441204429221 0.15537673738112656 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 99091 15411 SLADVILLQT True PC9_epitope_Rep4 1071.6175756917098 1071.61646993586 67.209 2 -0.5443611050359877 0.15537673738112656 1.0 ['ENSG00000170899|ENST00000370963|GSTA4', 'nc|ENSG00000170899|O15217-2|GSTA4'] 30195 17691 FYVMEHVQ True PC9_epitope_Rep4 1051.4797023199098 1051.47860993586 76.073 2 -0.5443745796598727 0.15539046752064503 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-2|ACAD11', 'ENST00000471702.2_2_3:132339980-132400782:-|nuORF'] 98313 14445 SIGCTPDTVAS True PC9_epitope_Rep1 1049.46992548185 1049.4688299358602 60.386 2 -0.5445745475885366 0.1554829480802367 1.0 ['ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 74272 14352 NIHELWALTRI True H1975_Epitope_Rep3 1364.7564692063597 1364.75536993586 60.553 2 -0.5445790099967475 0.1554829480802367 1.0 ['RYR1|p.R4174Pfs*35|1|0.31|ENSG00000196218|chr19:38561349-38561352|CCGC/-|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.M2582Afs*19|1|0.11|ENSG00000196218|chr19:38502635-38502636|TA/-|frameshift_variant'] 136010 9361 YFLKLKEVP True NCI_RA007_Epitope_Rep3 1135.66413196131 1135.66302993586 43.913 2 -0.5445882122839355 0.15549667582372925 1.0 ['ENST00000260600.9_2_2:25042719-25042800:-|nuORF'] 76740 11396 NTRWRGRRRKR True NCI_RA007_Epitope_Rep2 1540.9035764192797 1540.9024699358602 48.918 2 -0.5446736295076391 0.15551040312093628 1.0 ['ENST00000238714.7_1_2:60983533-60983617:+|nuORF'] 53631 5161 KWLDSDAR True NCI_RA007_Epitope_Rep5 989.4930438849299 989.49194993586 26.547 2 -0.5447568087047999 0.1555728938086182 1.0 ['ENSG00000120915|ENST00000521400|EPHX2', 'nc|ENSG00000120915|P34913-3|EPHX2', 'nc|ENSG00000120915|P34913-2|EPHX2'] 13142 13363 DLSSGTMVDVP True PC9_epitope_Rep1 1119.51179029383 1119.51068993586 56.26 2 -0.544766003658695 0.15558661942069504 1.0 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1'] 2075 19501 AELHLSQWMP True PC9_epitope_Rep3 1210.58047899034 1210.57938993586 80.243 2 -0.5448252037969101 0.15559528646891507 1.0 ['ENST00000590152.1_1_19:9267483-9267588:+|nuORF'] 36100 16398 GVEHLRRHWL True PC9_epitope_Rep5 1301.71052207345 1301.70886490379 68.074 3 -0.5448549156491466 0.15559528646891507 1.0 ['ENST00000358769.6_1_10:70066654-70092651:-|nuORF', 'ENST00000309049.8_1_10:70066654-70092651:-|nuORF'] 23415 20567 EVVNFLVP True PC9_epitope_Rep1 915.5065686907499 915.50546993586 83.924 2 -0.5448670447711861 0.15559528646891507 1.0 ['ENST00000521993.2_1_8:37597892-37607371:+|nuORF', 'nc|ENSG00000147475|O94905-2|ERLIN2', 'nc|ENSG00000147475|O94905-3|ERLIN2', 'ENSG00000147475|ENST00000519638|ERLIN2'] 83504 14164 QDIQLVAAL True NCI_RA007_Epitope_Rep4 969.5494961318899 969.54838993586 61.761 2 -0.5449059957297802 0.1556014237188968 1.0 ['ENSG00000179029|ENST00000437139|TMEM107'] 101701 11264 SPGIHFSL True PC9_epitope_Rep4 856.44430278736 856.44320993586 51.102 2 -0.5449108268226993 0.1556014237188968 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|16|1|sense'] 125558 16091 VLYFDFWFE True PC9_epitope_Rep2 1264.5804619069997 1264.57936993586 67.151 2 -0.5449127870717698 0.1556014237188968 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7'] 34396 13128 GPVASSGEF True PC9_epitope_Rep2 849.38684748089 849.38574993586 55.77 2 -0.5449560970883184 0.1556014237188968 1.0 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1', 'ENST00000530302.1_1_5:157218668-157230721:-|nuORF'] 33793 13627 GLSVSLGR True H1975_Epitope_Rep1 787.4552018242299 787.4546549679301 57.548 1 -0.5450012441374891 0.15561514708272386 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 130501 10102 VTVTMGEKYVQ True NCI_RA007_Epitope_Rep1 1253.63257413285 1253.6314699358602 43.305 2 -0.5450346208503414 0.15561622464898595 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'ENST00000492261.5_1_12:124409716-124414381:+|nuORF'] 139469 20051 YTFTRRFIYF True PC9_epitope_Rep3 1412.72410644892 1412.72245490379 82.375 3 -0.5451167668674943 0.15561622464898595 1.0 ['ENST00000335670.10_1_15:60784332-60784527:-|nuORF'] 117496 7929 VAEPLKTHHSI True PC9_epitope_Rep2 1230.6720708760602 1230.67042490379 35.863 3 -0.5451167914542877 0.15561622464898595 1.0 ['ENST00000520838.1_1_5:138080350-138088780:-|nuORF'] 101682 15710 SPFTVGVAA True PC9_epitope_Rep6 847.4439684341899 847.44286993586 72.645 2 -0.5451219731109493 0.15561622464898595 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 133329 8918 WESGAGPG True PC9_epitope_Rep5 759.3187679210698 759.31766993586 39.247 2 -0.5451392655306024 0.15561622464898595 1.0 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-4|LAS1L'] 59970 15238 LHNFWKRYLQK True PC9_epitope_Rep3 1531.84120188983 1531.83955490379 63.761 3 -0.545255691632535 0.15561622464898595 1.0 ['nc|ENSG00000115750|Q53T94-2|TAF1B', 'ENSG00000115750|ENST00000263663|TAF1B', 'ENST00000402170.5_1_2:9983670-10008796:+|nuORF'] 39578 11354 HPIPLPSAA True PC9_epitope_Rep1 901.50215201665 901.50104993586 48.551 2 -0.5453097661934606 0.15565991744938087 1.0 ['ENSG00000137090|ENST00000382276|DMRT1', 'nc|ENSG00000137090|Q9Y5R6-2|DMRT1', 'ENST00000564322.1_1_9:841703-894198:+|nuORF'] 34412 19500 GPWCLLSL True PC9_epitope_Rep2 887.4575103233499 887.45640993586 80.389 2 -0.5453276475866158 0.15565991744938087 1.0 ['ENST00000306384.4_1_2:85820230-85820377:+|nuORF'] 17 11090 AAAAAEPPAP True PC9_epitope_Rep1 864.4341320264799 864.43302993586 47.545 2 -0.5453638879352533 0.1556873578160546 1.0 ['RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'RB1|p.A74Efs*4|1|0.36|ENSG00000139687|chr13:48307352-48307353|-/AG|frameshift_variant', 'RB1-CNIH3|1|fusion'] 30659 18137 GALGPGITDAL True PC9_epitope_Rep6 983.52876068731 983.52766993586 82.401 2 -0.5453727057422754 0.1556873578160546 1.0 ['nc|ENSG00000144488|Q6ZVH7-2|ESPNL', 'ENSG00000144488|ENST00000343063|ESPNL'] 30188 12635 FYVEHPEV True PC9_epitope_Rep4 1018.4759968384599 1018.47488993586 56.439 2 -0.5454526142384466 0.15569348758611726 1.0 ['ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENST00000216019.11_1_22:38888049-38902242:-|nuORF', 'nc|ENSG00000100201|Q92841-3|DDX17', 'ENST00000432525.5_1_22:38886367-38903636:-|nuORF'] 45594 6668 ISGPKGDSGP True H1975_Epitope_Rep3 913.4505103666099 913.44940993586 30.603 2 -0.545459021933773 0.15569348758611726 1.0 ['CON__P04258'] 122737 21214 VGVDEEIVYAK True H1975_Epitope_Rep1 1220.6288686513997 1220.6277699358602 88.138 2 -0.545460856980814 0.15569348758611726 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.T612Dfs*15|1|0.34|ENSG00000092201|chr14:21361174-21361175|-/T|frameshift_variant', 'ENST00000556217.5_1_14:21837875-21852161:-|nuORF'] 109582 10366 THDDSHLVSL True PC9_epitope_Rep3 1122.5305515924601 1122.5294499358602 44.816 2 -0.5454859844442952 0.15569348758611726 1.0 ['ENSG00000149499|ENST00000394773|EML3', 'ENST00000460939.5_1_11:62369949-62370383:-|nuORF'] 26506 10274 FISQDQRWKEV True PC9_epitope_Rep5 1434.7255630009 1434.72391490379 44.506 3 -0.5455131881133309 0.1557046761771683 1.0 ['ENST00000378024.8_2_11:62285003-62285048:-|nuORF'] 23172 12889 EVPENFFIDP True H1975_Epitope_Rep2 1205.5604547384098 1205.5593499358602 54.69 2 -0.5455451220277626 0.1557046761771683 1.0 ['nc|ENSG00000159625|Q8IY82-2|DRC7', 'ENSG00000159625|ENST00000360716|DRC7'] 126063 16592 VPAVVLQA True PC9_epitope_Rep4 795.4854393233499 795.48489496793 71.797 1 -0.5455785269154685 0.1557183940728224 1.0 ['ENST00000430184.1_1_20:61364051-61366679:-|nuORF'] 94297 17462 RWSRRTLYVQ True PC9_epitope_Rep5 1363.74730150499 1363.7462099358602 72.168 2 -0.5456522384681469 0.15574835900435433 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 43701 12295 IIQFIRHWRQW True H1975_Epitope_Rep1 1581.8680853440098 1581.8669899358601 52.318 2 -0.545666919688397 0.15576207574452874 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.G158Sfs*29|1|0.37|ENSG00000081248|chr1:201092040-201092042|CCG/AA|frameshift_variant', 'CACNA1S|p.G577Afs*35|2|0.19|ENSG00000081248|chr1:201077017-201077017|C/-|frameshift_variant'] 132028 21224 VYGTLSDLL True PC9_epitope_Rep4 979.5226126777098 979.5220649679301 89.803 1 -0.5456907455215609 0.1557869768650897 1.0 ['ENST00000526766.1_1_11:112051504-112052349:+|nuORF', 'ENST00000521458.5_1_8:25298091-25315747:-|nuORF', 'ENSG00000104756|ENST00000221200|KCTD9'] 44796 7923 IPTPQSQPS True H1975_Epitope_Rep2 953.4818104948899 953.48070993586 35.421 2 -0.5457146805482787 0.1557869768650897 1.0 ['ENST00000456170.5_1_1:44686783-44687191:-|nuORF'] 128023 24740 VRRGKKRVK True NCI_RA007_Epitope_Rep1 1125.75707834305 1125.75657496793 102.43 1 -0.5457281330041266 0.1557869768650897 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 113007 17697 TPTLNTII True PC9_epitope_Rep6 871.5014833103099 871.5009349679301 80.707 1 -0.5457840581649703 0.15580069208649455 1.0 ['OR4K2|p.P284T|1|0.18|ENSG00000165762|chr14:19877117-19877117|C/A|missense_variant'] 136732 7080 YIMMKHVP True NCI_RA007_Epitope_Rep2 1017.5139796536499 1017.51288993586 32.164 2 -0.5458590410365675 0.15582812119242953 1.0 ['ENST00000397457.6_2_6:8014843-8014969:-|nuORF'] 107017 7812 SYLNIYSSQVR True H1975_Epitope_Rep1 1328.6724647988801 1328.6713699358602 35.003 2 -0.5458837121708954 0.15582812119242953 1.0 ['DSCAM|p.S472Y|1|0.57|ENSG00000171587|chr21:40339211-40339211|G/T|missense_variant'] 139213 17541 YSVINRSPHYL True PC9_epitope_Rep2 1347.69353459663 1347.69187490379 72.739 3 -0.54602888091738 0.15589057118721164 1.0 ['nc|ENSG00000144278|Q8IUC8-2|GALNT13', 'GALNT13|p.Y507Cfs*2|1|0.36|ENSG00000144278|chr2:154438714-154438718|ATATG/-|frameshift_variant', 'ENSG00000144278|ENST00000392825|GALNT13', 'nc|ENSG00000144278|Q8IUC8-3|GALNT13'] 107197 19262 SYPDLLPTF True NCI_RA007_Epitope_Rep1 1051.52261267771 1051.52207496793 79.082 1 -0.5460687671490058 0.15593677404681838 1.0 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 19699 8612 ELSEQQCTYLK True NCI_RA007_Epitope_Rep2 1340.6282170284 1340.62657490379 38.143 3 -0.5461463089859478 0.1559779077322937 1.0 ['ENSG00000153237|ENST00000283233|CCDC148', 'CCDC148|p.Y421Ifs*29|1|0.22|ENSG00000153237|chr2:158220704-158220705|-/T|frameshift_variant', 'nc|ENSG00000153237|Q8NFR7-3|CCDC148', 'CCDC148|p.A314Cfs*14|1|0.43|ENSG00000153237|chr2:158309603-158309604|-/A|frameshift_variant', 'nc|ENSG00000153237|Q8NFR7-4|CCDC148', 'ENST00000451554.1_1_2:159145303-159312956:-|nuORF'] 105354 5548 STYCNQMMRRR True NCI_RA007_Epitope_Rep4 1444.6485927168399 1444.64695490379 27.938 3 -0.5461656825261589 0.1559779077322937 1.0 ['ENSG00000129538|ENST00000397967|RNASE1'] 26922 11530 FLGVQAGK True PC9_epitope_Rep1 818.4650382319398 818.46394993586 49.23 2 -0.5461805864916343 0.1559779077322937 1.0 ['nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT'] 135707 16343 YEILVWCVYY True NCI_RA007_Epitope_Rep5 1349.6365968841299 1349.63548993586 69.619 2 -0.5462347963928603 0.15598655036304274 1.0 ['ENSG00000237110|ENST00000434551|TAAR9'] 69659 10074 LVVTMMLKNP True NCI_RA007_Epitope_Rep1 1144.6348230623198 1144.6337299358602 43.195 2 -0.5462758427789233 0.15598655036304274 1.0 ['ENST00000358731.8_2_5:70754407-70754644:+|nuORF'] 98114 19829 SIAIGSQPV True PC9_epitope_Rep3 870.4810822189 870.47998993586 81.507 2 -0.546276014092459 0.15598655036304274 1.0 ['ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-3|ERLEC1'] 74484 6598 NKLFLDYTIK True NCI_RA007_Epitope_Rep5 1253.70197402201 1253.70031490379 32.038 3 -0.5463963859348666 0.15600025989214475 1.0 ['ENSG00000080986|ENST00000261597|NDC80'] 81735 16113 PSAQRWWWRWQ True NCI_RA007_Epitope_Rep4 1585.7690995787298 1585.7680099358602 69.878 2 -0.5464140937971015 0.15600636694386694 1.0 ['ENST00000305123.5_1_2:227663257-227663680:-|nuORF'] 126511 18389 VPNKFLVTAEI True PC9_epitope_Rep4 1229.7019740220098 1229.70086993586 78.799 2 -0.5464328608644146 0.15600636694386694 1.0 ['ENST00000558725.5_1_15:67519241-67546969:-|nuORF', 'ENSG00000103591|ENST00000261880|AAGAB'] 45670 8425 ISKEHWNP True PC9_epitope_Rep3 1009.49812926537 1009.49702993586 37.371 2 -0.54647066612627 0.15600636694386694 1.0 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A', 'nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E', 'ENST00000417282.1_1_7:56372411-56373020:-|nuORF'] 44234 20260 ILSTLLCPN True PC9_epitope_Rep4 972.5314035396 972.53030993586 86.073 2 -0.5464857037351541 0.15600636694386694 1.0 ['ENST00000211314.4_1_6:52551206-52551344:+|nuORF'] 45906 7688 ISRKTLDEL True PC9_epitope_Rep2 1073.60807363717 1073.6069699358602 34.94 2 -0.5465738399845327 0.15601754101023227 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 71354 6362 MHWKMRSHFNR True NCI_RA007_Epitope_Rep5 1528.7292259960398 1528.7275649037902 31.146 3 -0.5466096389699301 0.15601754101023227 1.0 ['nc|ENSG00000292332|P26951-2|IL3RA', 'ENSG00000185291|ENST00000331035|IL3RA'] 75166 18572 NNKELINI True PC9_epitope_Rep5 956.5290950404799 956.52798993586 76.461 2 -0.5466473330359629 0.1560312484773676 1.0 ['TMEM87B-MERTK|1|fusion', 'nc|ENSG00000153214|Q96K49-2|TMEM87B', 'ENSG00000153214|ENST00000283206|TMEM87B'] 64002 15913 LQCELCDGD True PC9_epitope_Rep5 994.3735825688599 994.37248993586 66.201 2 -0.5467762619596503 0.15608353904118488 1.0 ['ENSG00000177311|ENST00000321464|ZBTB38'] 95726 4067 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 20.763 2 -0.5467763877117608 0.15608353904118488 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 90918 23841 RLEHEKRRKEI True PC9_epitope_Rep5 1492.85864285912 1492.8569849037901 96.685 3 -0.5467815740884894 0.15608353904118488 1.0 ['ENST00000587602.5_1_19:1073185-1086002:+|nuORF', 'ENSG00000180448|ENST00000313093|ARHGAP45', 'nc|ENSG00000180448|Q92619-2|ARHGAP45'] 80728 16759 PLRGRLRQH True NCI_RA007_Epitope_Rep3 1131.67374264191 1131.6726499358601 73.766 2 -0.5467907978060451 0.15608353904118488 1.0 ['ENSG00000146839|ENST00000613979|ZAN'] 95727 3688 SCCCCCCC True PC9_epitope_Rep4 826.10688658094 826.10578993586 20.317 2 -0.5468215947665582 0.15608353904118488 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 95725 3981 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 20.42 2 -0.5468481732769137 0.15608963949334198 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 128617 8291 VSKVTVGSI True PC9_epitope_Rep6 888.5280324113199 888.52692993586 41.506 2 -0.5468541696373136 0.15608963949334198 1.0 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79567604-79581271:-|nuORF'] 973 8307 AEAAQGQGL True H1975_Epitope_Rep3 843.4086455546299 843.40754993586 36.937 2 -0.5468734107812443 0.15608963949334198 1.0 ['nc|ENSG00000164638|Q7RTT9-2|SLC29A4', 'ENSG00000164638|ENST00000396872|SLC29A4'] 59455 7546 LGNCQDEKQDR True NCI_RA007_Epitope_Rep5 1304.5779127910398 1304.5762649037902 35.712 3 -0.5468918941779646 0.15608963949334198 1.0 ['nc|ENSG00000064042|Q9UPQ0-9|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-8|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-6|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-5|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-10|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-2|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-4|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0|LIMCH1', 'nc|ENSG00000064042|Q9UPQ0-3|LIMCH1', 'ENSG00000064042|ENST00000503057|LIMCH1'] 132235 23034 VYKRVFFPFFR True PC9_epitope_Rep6 1504.8343256042397 1504.8332299358601 101.7 2 -0.5469113509506561 0.15610334356376154 1.0 ['ENST00000249636.10_1_15:68480212-68480365:+|nuORF'] 95724 3895 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 20.082 2 -0.5469189124052568 0.1561170471891137 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 116426 9548 TWSPASEP True H1975_Epitope_Rep2 873.38684748089 873.3862949679301 41.699 1 -0.5469634674820548 0.15612567995453439 1.0 ['ENST00000244769.8_1_6:16303126-16303444:-|nuORF'] 123661 6615 VIMTWRVCITL True NCI_RA007_Epitope_Rep3 1333.72503504905 1333.72339490379 33.08 3 -0.5470325421254064 0.15612567995453439 1.0 ['ENSG00000221970|ENST00000641044|OR2A1', 'ENSG00000212807|ENST00000641810|OR2A42'] 38545 13910 HHESGGPTSL True PC9_epitope_Rep3 1020.46247203264 1020.46136993586 58.586 2 -0.5470335562058936 0.15612567995453439 1.0 ['ENST00000450633.6_1_3:127292132-127292357:-|nuORF'] 115357 11222 TVEGLGLA True H1975_Epitope_Rep2 758.41741933318 758.4168749679301 48.208 1 -0.5470637852284648 0.15613938232715227 1.0 ['ENST00000469931.2_1_1:153606696-153606801:-|nuORF'] 80698 12929 PLPVPPPTG True PC9_epitope_Rep5 873.49600400705 873.49490993586 54.743 2 -0.5470866642842726 0.15615308425479404 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 48278 10960 KDLDEALP True NCI_RA007_Epitope_Rep4 899.4600124211499 899.4594649679301 49.026 1 -0.5471295136282753 0.15616678573748133 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 39579 11301 HPIPLPSAA True PC9_epitope_Rep5 901.50215201665 901.50104993586 48.462 2 -0.547172805080475 0.15620535134433045 1.0 ['ENSG00000137090|ENST00000382276|DMRT1', 'nc|ENSG00000137090|Q9Y5R6-2|DMRT1', 'ENST00000564322.1_1_9:841703-894198:+|nuORF'] 114544 3451 TSIEVGVK True NCI_RA007_Epitope_Rep5 831.4701831820299 831.46908993586 19.027 2 -0.5471754812865322 0.15620535134433045 1.0 ['ENSG00000185668|ENST00000373012|POU3F1'] 56654 7201 LEAAGDKF True PC9_epitope_Rep1 849.42323298961 849.42212993586 32.514 2 -0.5471908696023693 0.15620535134433045 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 71630 19425 MLNVIFLGI True PC9_epitope_Rep2 1018.5885244928999 1018.58742993586 80.096 2 -0.5472230122624154 0.15620535134433045 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 56231 7817 LDPSRESIP True H1975_Epitope_Rep2 1012.5189242795999 1012.51782993586 35.015 2 -0.5472954442720266 0.1562165145955775 1.0 ['nc|ENSG00000291104|Q96KV6|BTN2A3P'] 10821 7808 DAGRYFFRMEK True H1975_Epitope_Rep1 1418.6765046334997 1418.6754099358602 34.987 2 -0.5473380993483287 0.1562165145955775 1.0 ['nc|ENSG00000168995|Q9Y286-4|SIGLEC7', 'nc|ENSG00000168995|Q9Y286-3|SIGLEC7', 'nc|ENSG00000168995|Q9Y286-2|SIGLEC7', 'ENSG00000129450|ENST00000250360|SIGLEC9', 'ENSG00000168995|ENST00000317643|SIGLEC7', 'nc|ENSG00000129450|Q9Y336-2|SIGLEC9'] 65961 11143 LSLPYYHAAL True PC9_epitope_Rep2 1146.60734536118 1146.6062499358602 48.189 2 -0.5473766013318319 0.1562413753916587 1.0 ['ENST00000556748.5_1_14:58666901-58681958:+|nuORF', 'ENST00000545307.6_1_14:58666901-58669614:+|nuORF'] 80821 15961 PLTLSPAAPA True PC9_epitope_Rep4 936.5280324113198 936.52692993586 69.322 2 -0.5473939109769377 0.1562413753916587 1.0 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 71232 19146 MFVFKERWFWR True PC9_epitope_Rep5 1630.8231092975398 1630.82200993586 78.68 2 -0.5474065525539457 0.1562413753916587 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 23319 15317 EVSTDSFP True PC9_epitope_Rep3 880.3814277472799 880.38032993586 64.068 2 -0.5475006735540552 0.1562875418033053 1.0 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'ENSG00000129680|ENST00000316077|MAP7D3'] 19819 8717 ELTRLKYLHEK True NCI_RA007_Epitope_Rep1 1428.8088987020399 1428.80725490379 37.91 3 -0.5475523267664119 0.1562961640233113 1.0 ['nc|ENSG00000284701|A6NEH6|TMEM247'] 55175 9631 LAPDADDSI True PC9_epitope_Rep4 915.4185415319901 915.41744993586 44.669 2 -0.5475729187953946 0.1562961640233113 1.0 ['ELAVL2|p.E289D|1|0.71|ENSG00000107105|chr9:23692770-23692770|C/G|missense_variant'] 54887 13095 LAGLSALPVS True PC9_epitope_Rep5 926.54368247546 926.54258993586 55.374 2 -0.5475798937664037 0.1562961640233113 1.0 ['ENSG00000061455|ENST00000407847|PRDM6'] 42882 6545 IFSHIYNTI True NCI_RA007_Epitope_Rep5 1106.5760452329 1106.57494993586 31.838 2 -0.5475919756529574 0.15630986006947825 1.0 ['ENSG00000139173|ENST00000266534|TMEM117'] 116279 19827 TVVIILEGVP True PC9_epitope_Rep1 1038.63249747986 1038.6314099358601 81.078 2 -0.5477605983858511 0.15638594896435296 1.0 ['ENSG00000104154|ENST00000261867|SLC30A4'] 89749 4210 REYRDLTTA True NCI_RA007_Epitope_Rep3 1123.56218607391 1123.56055490379 23.214 3 -0.5477669310915039 0.15638594896435296 1.0 ['ENSG00000105640|ENST00000222247|RPL18A', 'ENST00000600238.1_1_19:17972170-17973061:+|nuORF'] 124959 9843 VLMKLLPPP True H1975_Epitope_Rep3 1006.6249100016198 1006.62380993586 42.89 2 -0.547919669569295 0.1564407219841579 1.0 ['ENSG00000176102|ENST00000323959|CSTF3'] 78874 23490 PESVRRPWEKN True PC9_epitope_Rep1 1396.7211463267997 1396.72004993586 95.14 2 -0.5479344251438227 0.1564407219841579 1.0 ['ENST00000588273.1_1_19:46027302-46029432:+|nuORF', 'ENST00000588463.1_1_19:46027302-46027401:+|nuORF'] 43607 10825 IIINDDLTV True NCI_RA007_Epitope_Rep3 1014.55972646242 1014.55862993586 49.629 2 -0.5479462467156847 0.1564407219841579 1.0 ['ENSG00000150054|ENST00000683449|MPP7', 'ENST00000496637.6_1_10:28342996-28348461:-|nuORF'] 19295 11229 ELLRWKEDP True PC9_epitope_Rep5 1184.61897267404 1184.6178699358602 48.182 2 -0.5479513043882362 0.1564407219841579 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1', 'ENST00000606296.1_1_3:18393447-18393747:-|nuORF', 'ENST00000467628.1_1_3:18393447-18419817:-|nuORF'] 19925 10074 ELYGRLYR True PC9_epitope_Rep3 1068.5716285587998 1068.5705299358601 43.703 2 -0.5480238909048145 0.15646810582697615 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 112418 9243 TNIENNNNKFY True H1975_Epitope_Rep1 1369.6262428824498 1369.62514993586 40.465 2 -0.5480240477141569 0.15646810582697615 1.0 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000470601.5_1_3:51977371-51978822:+|nuORF'] 115249 16994 TVDEVESLI True PC9_epitope_Rep6 1003.5073565363899 1003.50624993586 77.918 2 -0.5480320714542414 0.1564792572875414 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2'] 128662 12276 VSLRSEETV True PC9_epitope_Rep6 1018.5294889633 1018.52838993586 58.604 2 -0.5480459902737979 0.1564792572875414 1.0 ['ENSG00000071894|ENST00000616140|CPSF1'] 79151 3833 PGASPRKKPR True NCI_RA007_Epitope_Rep2 1092.651610215 1092.65050993586 19.544 2 -0.5481097781364475 0.15652540859883465 1.0 ['nc|ENSG00000136715|Q9H0E3|SAP130', 'ENSG00000136715|ENST00000643581|SAP130', 'nc|ENSG00000136715|Q9H0E3-3|SAP130', 'nc|ENSG00000136715|Q9H0E3-2|SAP130'] 86446 13563 QQRQRLWRQFR True H1975_Epitope_Rep1 1600.8811096391998 1600.88000993586 57.296 2 -0.5481730320306102 0.15668516895510762 1.0 ['ENST00000600059.5_1_19:48988799-49002658:-|nuORF'] 59596 11619 LGSATATP True H1975_Epitope_Rep3 716.37046914076 716.36992496793 49.824 1 -0.5482332503541868 0.1566988557981011 1.0 ['ENST00000471119.5_1_1:33546965-33585780:+|nuORF', 'ENST00000481886.5_1_1:33546965-33585780:+|nuORF'] 48296 6079 KDLPQNCD True NCI_RA007_Epitope_Rep1 931.4069313024701 931.40582993586 27.684 2 -0.548238948115572 0.156712542196832 1.0 ['nc|ENSG00000178177|Q8N3X6|LCORL', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'ENSG00000178177|ENST00000635767|LCORL'] 97094 12453 SFAHTECLL True PC9_epitope_Rep1 1019.4746169394699 1019.47350993586 52.767 2 -0.5482575855149521 0.15673482635507952 1.0 ['ENSG00000221933|ENST00000641663|OR2A25', 'ENST00000479887.1_1_7:143947766-143948387:-|nuORF'] 135362 17681 YDEYRYRSVIK True NCI_RA007_Epitope_Rep1 1490.7517777487399 1490.75068993586 72.911 2 -0.5482846122112035 0.15673482635507952 1.0 ['nc|ENSG00000001626|P13569-2|CFTR', 'ENSG00000001626|ENST00000003084|CFTR', 'CFTR|p.S858Efs*38|1|0.24|ENSG00000001626|chr7:117595007-117595008|-/A|frameshift_variant', 'nc|ENSG00000001626|P13569-3|CFTR'] 129123 10719 VTCWLQRWSRW True NCI_RA007_Epitope_Rep3 1519.75067263327 1519.74956993586 49.211 2 -0.5482855375823315 0.15673482635507952 1.0 ['ENST00000228425.10_2_12:27786336-27786390:+|nuORF'] 52916 12601 KRIDSVYLDPL True NCI_RA007_Epitope_Rep1 1317.7292513990099 1317.72814993586 52.998 2 -0.5483125956939424 0.15673482635507952 1.0 ['ENSG00000105928|ENST00000645220|GSDME', 'nc|ENSG00000105928|O60443-3|GSDME'] 128936 10811 VSTVNERFDV True NCI_RA007_Epitope_Rep4 1164.57750178488 1164.57640993586 48.433 2 -0.548325877489668 0.15674342372166236 1.0 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'ENST00000479272.1_1_1:149906082-149907243:-|nuORF', 'nc|ENSG00000014914|A4FU01-3|MTMR11', 'ENST00000466496.5_1_1:149902724-149908701:-|nuORF', 'nc|ENSG00000014914|A4FU01-2|MTMR11', 'ENST00000492824.5_1_1:149905714-149908540:-|nuORF', 'nc|ENSG00000014914|A4FU01-5|MTMR11', 'ENST00000482343.5_1_1:149902724-149908540:-|nuORF', 'nc|ENSG00000014914|A4FU01-6|MTMR11'] 100864 6317 SLSFQSTQVP True H1975_Epitope_Rep3 1092.54513902744 1092.5440499358601 29.293 2 -0.5483374937427365 0.15674342372166236 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12'] 127755 25957 VRKERKRHKT True PC9_epitope_Rep4 1336.81638412432 1336.8152899358602 109.66 2 -0.5483579610272271 0.15674342372166236 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 48338 8194 KDVENQLSP True H1975_Epitope_Rep3 1028.51383889916 1028.51274993586 36.498 2 -0.5484556431784138 0.15679815665211677 1.0 ['ENSG00000174498|ENST00000327987|IGDCC3'] 127783 732 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 4.0724 3 -0.5484784946318012 0.15679815665211677 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 133837 6133 WLWRRRWSFFY True H1975_Epitope_Rep1 1701.8680853440096 1701.8664449037901 28.66 3 -0.5484951503409402 0.15679815665211677 1.0 ['ENST00000374500.9_1_6:33385885-33386053:-|nuORF'] 3791 5369 AGVFMRMKLPG True NCI_RA007_Epitope_Rep3 1205.64130542509 1205.6396549037902 28.126 3 -0.548504878733091 0.15679815665211677 1.0 ['ENST00000424397.2_1_4:113606608-113606656:+|nuORF'] 16372 14944 EELEKFSKSK True H1975_Epitope_Rep1 1223.63976768827 1223.6386699358602 62.72 2 -0.5485322620496971 0.156811838774583 1.0 ['ENSG00000215305|ENST00000380445|VPS16', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16'] 11387 4447 DFICEAQNP True NCI_RA007_Epitope_Rep5 1035.4331460503097 1035.43204993586 23.748 2 -0.5486284622509945 0.1568229758234626 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant'] 59453 16288 LGNALIVVTI True PC9_epitope_Rep5 1011.63283183303 1011.63172993586 67.645 2 -0.5486383272981159 0.1568229758234626 1.0 ['ENSG00000166884|ENST00000300127|OR4D6', 'OR4D6|p.G152Vfs*9|1|0.31|ENSG00000166884|chr11:59457414-59457414|G/-|frameshift_variant', 'OR4D6|p.M281Cfs*2|2|0.3|ENSG00000166884|chr11:59457796-59457796|C/-|frameshift_variant'] 101279 6291 SLWSRSLHFP True NCI_RA007_Epitope_Rep3 1228.6352914445201 1228.6336349037902 31.747 3 -0.5486577314588342 0.15682647846191286 1.0 ['ENST00000290650.8_1_15:43242534-43244580:-|nuORF'] 33062 6753 GKEEIKLIP True H1975_Epitope_Rep2 1025.6120963884498 1025.61098993586 30.89 2 -0.5486593019931019 0.15682647846191286 1.0 ['PDE6C|p.V333L|1|0.4|ENSG00000095464|chr10:93626697-93626697|G/T|missense_variant'] 115590 23557 TVIDQIPFLAV True PC9_epitope_Rep2 1214.6910749851402 1214.68996993586 96.086 2 -0.5486609741968972 0.15682647846191286 1.0 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 64373 4868 LQQEHLFTG True NCI_RA007_Epitope_Rep2 1071.53490869691 1071.53380993586 23.559 2 -0.5486769444071767 0.15682647846191286 1.0 ['ENST00000341183.9_2_1:47023869-47024013:-|nuORF'] 73406 17061 NESAVIVAP True PC9_epitope_Rep3 898.4759968384599 898.47544496793 70.777 1 -0.5486828243557323 0.15682647846191286 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 82913 4052 PWDLWPPP True H1975_Epitope_Rep1 1006.4912529797799 1006.49014993586 20.449 2 -0.5487383832209313 0.15685129303351827 1.0 ['ENST00000321751.9_1_1:1309740-1310526:-|nuORF', 'ENST00000338338.9_1_1:1309740-1310620:-|nuORF', 'ENST00000378853.3_1_1:1309740-1310526:-|nuORF'] 5287 11331 ALRPQLAP True PC9_epitope_Rep1 864.5181364339599 864.51702993586 48.464 2 -0.5487501087855741 0.15685129303351827 1.0 ['ENST00000395379.5_1_8:133787694-133790038:+|nuORF'] 87591 8711 QTQQEEREVAL True H1975_Epitope_Rep1 1329.65245763029 1329.6513699358602 38.433 2 -0.5488003972413056 0.15685129303351827 1.0 ['ENST00000182527.3_1_6:52364724-52364970:-|nuORF'] 59416 8469 LGLSTYEF True NCI_RA007_Epitope_Rep3 928.4541987647199 928.45310993586 40.392 2 -0.5488255093732367 0.1568649718522364 1.0 ['CLK1|p.D250E|1|0.3|ENSG00000013441|chr2:200857800-200857800|G/C|missense_variant'] 96687 9755 SEPFTHLHP True H1975_Epitope_Rep3 1063.50869394907 1063.50758993586 42.545 2 -0.5489303418162235 0.15691109669046074 1.0 ['ENST00000417037.6_2_3:38182773-38183136:+|nuORF'] 129418 9735 VTEIMPICKCL True PC9_epitope_Rep2 1248.6280234297199 1248.62638490379 42.787 3 -0.5491042898149923 0.1569409970636427 1.0 ['PNMA5|p.W189Cfs*34|2|0.33|ENSG00000198883|chrX:152991032-152991032|C/-|frameshift_variant'] 77244 7421 NYIKRNWRI True NCI_RA007_Epitope_Rep4 1261.7043740638499 1261.70272490379 35.186 3 -0.5491811757422411 0.15694958146778276 1.0 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 65998 11110 LSLTWQAD True PC9_epitope_Rep3 932.4603467743199 932.45924993586 47.731 2 -0.5491923567387618 0.15694958146778276 1.0 ['ENST00000278935.7_2_11:117283083-117283290:+|nuORF'] 112931 17462 TPQVSECQSL True PC9_epitope_Rep2 1090.49647458286 1090.49536993586 72.418 2 -0.549198670757941 0.15694958146778276 1.0 ['ENST00000496390.5_1_X:153904852-153905050:-|nuORF'] 57678 17597 LEMNNNKI True PC9_epitope_Rep3 974.48551597634 974.48440993586 72.874 2 -0.549237802600663 0.15697947927650255 1.0 ['nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L', 'ENSG00000157060|ENST00000367547|SHCBP1L'] 126178 19904 VPGAWVVG True PC9_epitope_Rep2 783.4279244472299 783.4273749679301 81.957 1 -0.5493758254136333 0.15700937611523863 1.0 ['ENST00000532654.5_1_11:78775723-78781043:-|nuORF'] 118016 15019 VASREQLSI True PC9_epitope_Rep4 1001.5505587610498 1001.54946993586 65.707 2 -0.5495390097377845 0.15710415754213505 1.0 ['ENSG00000101842|ENST00000217957|VSIG1', 'nc|ENSG00000101842|Q86XK7-2|VSIG1'] 31793 4679 GELTSGKYPN True NCI_RA007_Epitope_Rep5 1064.5138388991597 1064.51274993586 24.682 2 -0.5495913635622773 0.1571178302621334 1.0 ['ENSG00000173431|ENST00000308227|RNASE8'] 39299 7511 HLQMRLWTWDF True PC9_epitope_Rep5 1531.73943924323 1531.73779490379 33.842 3 -0.5496112992436916 0.15713150253856512 1.0 ['nc|ENSG00000122420|P43088-5|PTGFR'] 19039 14566 ELGMPTLAV True NCI_RA007_Epitope_Rep4 929.48920437445 929.48810993586 63.404 2 -0.5496468551514347 0.15716139497161394 1.0 ['ENSG00000102221|ENST00000614628|JADE3'] 119109 9255 VEIGVVAVK True H1975_Epitope_Rep3 912.5644179200399 912.56332993586 40.592 2 -0.5498190161525505 0.15719128643493213 1.0 ['ENSG00000070193|ENST00000264664|FGF10', 'NIPBL-FGF10|1|fusion'] 94214 7724 RWPHWSWCSRR True PC9_epitope_Rep5 1555.73675390463 1555.73509490379 34.652 3 -0.5498447572906087 0.157229746168194 1.0 ['ENST00000397397.6_1_11:866620-867061:+|nuORF'] 65760 12389 LSIGSLDVLP True H1975_Epitope_Rep2 1012.580461907 1012.57936993586 52.741 2 -0.5498629711849053 0.157229746168194 1.0 ['ENST00000519610.1_1_5:150534942-150535005:-|nuORF'] 69026 7553 LVHQRRRQE True NCI_RA007_Epitope_Rep1 1220.6850356016 1220.68392993586 33.373 2 -0.5499006403355523 0.157229746168194 1.0 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000270720.11_1_1:1887019-1905630:-|nuORF', 'nc|ENSG00000142609|Q9C0B2-2|CFAP74', 'nc|ENSG00000142609|Q9C0B2|CFAP74'] 106256 6921 SVQEYFVRK True NCI_RA007_Epitope_Rep4 1154.6084079903396 1154.6067749037902 33.241 3 -0.5499052626433025 0.157229746168194 1.0 ['ENSG00000163781|ENST00000260810|TOPBP1'] 74417 19841 NIVEVLRQI True PC9_epitope_Rep4 1082.64479349906 1082.64368993586 84.449 2 -0.550061560256459 0.15725963409887114 1.0 ['ENST00000552690.1_1_12:106715380-106717765:+|nuORF', 'nc|ENSG00000166046|Q8N4U5-2|TCP11L2', 'ENSG00000166046|ENST00000299045|TCP11L2'] 15572 10811 EATEKEQLI True PC9_epitope_Rep4 1059.54480467427 1059.54370993586 49.344 2 -0.5501035178871568 0.15726565034057735 1.0 ['ENSG00000076258|ENST00000367749|FMO4', 'ENST00000480136.1_1_1:171303670-171311201:+|nuORF'] 28148 5507 FRKKYELR True NCI_RA007_Epitope_Rep4 1138.6611122695397 1138.65946490379 27.774 3 -0.5501196191676211 0.15726565034057735 1.0 ['ENST00000542939.1_1_12:118576827-118582605:+|nuORF', 'ENSG00000089220|ENST00000261313|PEBP1', 'C12orf51-PEBP1|1|fusion'] 133631 8526 WKKGYHRWKMK True NCI_RA007_Epitope_Rep1 1546.8343426875797 1546.8326849037903 37.166 3 -0.5501305966688701 0.15726565034057735 1.0 ['L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|55|2|sense'] 43143 8101 IGQGM[Oxidation]LSIGY True H1975_Epitope_Rep3 1053.51648213189 1053.5153899358602 36.135 2 -0.5501318694329085 0.15726565034057735 1.0 ['ENSG00000203697|ENST00000366872|CAPN8'] 85660 21237 QLQLYAPNF True PC9_epitope_Rep3 1092.56039516876 1092.55928993586 86.979 2 -0.5501810953491245 0.15729553526540277 1.0 ['ENSG00000167971|ENST00000343516|CASKIN1'] 87594 9239 QTQQEEREVAL True NCI_RA007_Epitope_Rep2 1329.65245763029 1329.6513699358602 40.548 2 -0.5502061391790585 0.1573092017774318 1.0 ['ENST00000182527.3_1_6:52364724-52364970:-|nuORF'] 114991 14877 TTKQQDHFF True PC9_epitope_Rep4 1150.5407223533398 1150.5390749037902 65.162 3 -0.5502222517861806 0.1573152142185321 1.0 ['ENSG00000115956|ENST00000234313|PLEK'] 57416 20110 LEIHRKIKQS True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74480993586 84.296 2 -0.5502333849989786 0.1573152142185321 1.0 ['ENSG00000004534|ENST00000266022|RBM6', 'ENST00000421682.1_1_3:50103854-50112609:+|nuORF', 'ENST00000454079.5_1_3:50099373-50114563:+|nuORF', 'ENST00000434592.5_1_3:50097096-50127827:+|nuORF', 'nc|ENSG00000004534|P78332-2|RBM6', 'SEMA3F-RBM6|1|fusion', 'SEMA3F-RBM6|4|fusion', 'SEMA3F-RBM6|3|fusion', 'SEMA3F-RBM6|2|fusion'] 75444 8113 NQGQNIHRKTT True H1975_Epitope_Rep1 1295.6694451071096 1295.66834993586 36.151 2 -0.5502389953831566 0.1573152142185321 1.0 ['nc|ENSG00000001626|P13569-2|CFTR', 'ENSG00000001626|ENST00000003084|CFTR', 'CFTR|p.S858Efs*38|1|0.24|ENSG00000001626|chr7:117595007-117595008|-/A|frameshift_variant'] 111440 8285 TLKSDAGVEEK True NCI_RA007_Epitope_Rep2 1175.6033821795497 1175.6022899358602 36.865 2 -0.550250654852053 0.1573152142185321 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 126626 5334 VPQEAQKIQA True PC9_epitope_Rep4 1110.6033226098998 1110.6022299358601 27.232 2 -0.5502802053793513 0.15734254394499578 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN'] 93090 18873 RRRLLGPQP True NCI_RA007_Epitope_Rep1 1091.6675946323098 1091.66648993586 77.555 2 -0.550309568389268 0.15734254394499578 1.0 ['ENST00000262435.13_1_17:62658063-62658153:-|nuORF'] 129127 7888 VTDAEFSQAV True PC9_epitope_Rep4 1065.4978544818498 1065.4967499358602 37.771 2 -0.5503782062691512 0.15734855363860423 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1'] 93089 18778 RRRLLGPQP True NCI_RA007_Epitope_Rep1 1091.6675946323098 1091.66648993586 77.184 2 -0.5503872140005559 0.15734855363860423 1.0 ['ENST00000262435.13_1_17:62658063-62658153:-|nuORF'] 16771 14764 EFEGTFSLTP True H1975_Epitope_Rep2 1126.51825557326 1126.51714993586 61.948 2 -0.5504074514730606 0.15734855363860423 1.0 ['ENST00000538502.5_2_1:109856041-109856413:-|nuORF'] 39398 5443 HLVQTHYYNYR True NCI_RA007_Epitope_Rep2 1492.7211463268 1492.71949490379 25.792 3 -0.5504078167255602 0.15734855363860423 1.0 ['ENSG00000124787|ENST00000380051|RPP40', 'nc|ENSG00000124787|O75818-2|RPP40', 'ENST00000483546.1_1_6:5002311-5004281:-|nuORF'] 112748 15830 TPKNEVTV True PC9_epitope_Rep4 886.47599683846 886.47488993586 68.813 2 -0.550423391736694 0.15737843140434227 1.0 ['CDC20B|p.D470E|2|0.08|ENSG00000164287|chr5:55119850-55119850|A/T|missense_variant'] 29747 15612 FVQTPPVIS True PC9_epitope_Rep1 986.5436824754598 986.54258993586 64.871 2 -0.5504575635925726 0.15738954195379004 1.0 ['ENSG00000171316|ENST00000423902|CHD7'] 93088 18687 RRRLLGPQP True NCI_RA007_Epitope_Rep1 1091.6675946323098 1091.66648993586 76.829 2 -0.5504615110140524 0.15738954195379004 1.0 ['ENST00000262435.13_1_17:62658063-62658153:-|nuORF'] 107562 6367 TAEAEVLFRDG True NCI_RA007_Epitope_Rep1 1206.5880664685799 1206.58642490379 28.793 3 -0.5505153769738789 0.15742797386468652 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 137457 15845 YLNVREAVL True PC9_epitope_Rep6 1075.60259433391 1075.6014899358602 73.219 2 -0.550561015369439 0.15742797386468652 1.0 ['ENSG00000128965|ENST00000617768|CHAC1'] 95423 12901 SALAEKIKV True PC9_epitope_Rep6 957.5858816406098 957.58478993586 61.156 2 -0.5505715900999555 0.15742797386468652 1.0 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 109434 7887 TGSEPPKAKDP True H1975_Epitope_Rep1 1125.56660274801 1125.56550993586 35.289 2 -0.5505730714002873 0.15742797386468652 1.0 ['ENSG00000185122|ENST00000528838|HSF1', 'ENST00000532338.5_1_8:145534845-145537990:+|nuORF', 'ENST00000527328.5_1_8:145537548-145537990:+|nuORF'] 33692 16513 GLPSLGIWL True PC9_epitope_Rep5 954.5538532363399 954.55274993586 68.518 2 -0.5507074651641516 0.15745529417486745 1.0 ['ENST00000392062.6_1_2:227731973-227771552:+|nuORF'] 103995 24443 SRRRRPYGRLR True PC9_epitope_Rep2 1471.8708793086698 1471.8697899358601 99.594 2 -0.5507209086438558 0.15745529417486745 1.0 ['ENSG00000108239|ENST00000225235|TBC1D12'] 31262 7750 GDRETLATL True PC9_epitope_Rep6 974.5032742154599 974.50216993586 39.169 2 -0.5507890423521661 0.15749882463563705 1.0 ['ANKRD34A|p.W250Mfs*14|1|0.13|ENSG00000272031|chr1:145961012-145961013|-/T|frameshift_variant', 'ENSG00000272031|ENST00000606888|ANKRD34A'] 12144 19363 DIITRENVL True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 79.857 2 -0.5507952489354416 0.15749882463563705 1.0 ['nc|ENSG00000135931|Q7Z3E5-2|ARMC9', 'ENSG00000135931|ENST00000611582|ARMC9'] 85234 6142 QKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 30.645 3 -0.5508612240125201 0.15755090130981714 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 29135 13064 FTTLGEVAP True NCI_RA007_Epitope_Rep4 933.4807478657299 933.4801949679301 57.349 1 -0.550876022910226 0.15755090130981714 1.0 ['nc|ENSG00000157077|O95405-3|ZFYVE9', 'ENST00000361625.5_1_1:52698878-52729552:+|nuORF', 'nc|ENSG00000157077|O95405-2|ZFYVE9', 'ENSG00000157077|ENST00000287727|ZFYVE9'] 25294 14034 FEEEFIHLLS True NCI_RA007_Epitope_Rep2 1262.6183039676998 1262.61720993586 59.247 2 -0.5509117161883168 0.15755090130981714 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-9|CDH23', 'nc|ENSG00000107736|Q9H251-7|CDH23'] 127781 611 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 3.3993 3 -0.5509173184702704 0.15755090130981714 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 26372 15128 FIHQHFVEV True PC9_epitope_Rep3 1154.5872786229402 1154.5856249037902 63.329 3 -0.5509258407514986 0.15755090130981714 1.0 ['KLHL18|p.S161R|1|0.62|ENSG00000114648|chr3:47330032-47330032|C/A|missense_variant', 'ENST00000461084.5_1_3:47324437-47378284:+|nuORF', 'nc|ENSG00000114648|O94889-2|KLHL18', 'ENSG00000114648|ENST00000232766|KLHL18'] 44112 10430 ILNGKLDLAS True PC9_epitope_Rep5 1042.6022599807397 1042.60116993586 45.106 2 -0.5509312681496856 0.1575782136488896 1.0 ['DNAH7|p.A733S|1|0.09|ENSG00000118997|chr2:195969956-195969956|C/A|missense_variant'] 3157 7846 AGECSLLAA True H1975_Epitope_Rep3 833.3953039896098 833.39475496793 35.157 1 -0.5509692338839656 0.1575782136488896 1.0 ['ENSG00000151229|ENST00000280871|SLC2A13'] 62056 7306 LLMCRDIP True NCI_RA007_Epitope_Rep2 959.4932442090699 959.49214993586 33.038 2 -0.5510286326949254 0.15758931465992349 1.0 ['ENST00000312629.9_1_11:67201493-67201693:+|nuORF'] 105669 7036 SVFYFLPLIDP True H1975_Epitope_Rep3 1309.6958260124097 1309.69472993586 32.029 2 -0.551032131195368 0.15758931465992349 1.0 ['ENST00000512747.3_1_X:70327795-70327867:-|nuORF'] 138441 7234 YREMKDSDK True H1975_Epitope_Rep1 1170.5339227207398 1170.53282993586 32.836 2 -0.5510387334081883 0.1575978604424994 1.0 ['ENSG00000092148|ENST00000399332|HECTD1', 'ENST00000557321.1_1_14:31583449-31583566:-|nuORF', 'HEATR5A-HECTD1|1|fusion'] 57677 16321 LEMNNNKI True PC9_epitope_Rep2 974.48551597634 974.48440993586 68.023 2 -0.5511122214581062 0.1575978604424994 1.0 ['nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L', 'ENSG00000157060|ENST00000367547|SHCBP1L'] 96488 7883 SEKYYVDSV True PC9_epitope_Rep4 1088.5026055091198 1088.5015099358602 37.751 2 -0.5511160407139597 0.1575978604424994 1.0 ['nc|ENSG00000211938|P01780|IGHV3-7'] 3064 11842 AGACEGKLEL True PC9_epitope_Rep5 989.4851816231699 989.48408993586 50.55 2 -0.5512378947116137 0.15760640539401602 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'ENST00000460841.1_1_6:31959958-31961603:+|nuORF'] 82189 11719 PTFTYKAAHI True PC9_epitope_Rep1 1147.6025943339098 1147.60093490379 49.952 3 -0.5512385377583063 0.15760640539401602 1.0 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000599648.1_1_19:7705628-7705700:+|nuORF'] 15473 6976 EAPSLRPAPP True H1975_Epitope_Rep3 1033.55564414149 1033.5545499358602 31.795 2 -0.551240112001772 0.15760640539401602 1.0 ['ENSG00000171564|ENST00000302068|FGB'] 5775 12229 APELLQGSYG True NCI_RA007_Epitope_Rep5 1033.50802524273 1033.5069299358602 53.689 2 -0.5513583086252888 0.15766868182628568 1.0 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'PKMYT1|p.F483Lfs*14|1|0.54|ENSG00000127564|chr16:2973004-2973004|A/-|frameshift_variant', 'ENSG00000127564|ENST00000262300|PKMYT1'] 116465 14601 TYALSSVGSPK True PC9_epitope_Rep5 1108.57643915572 1108.57534993586 61.164 2 -0.5513951781407523 0.15769854132901134 1.0 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 100582 14266 SLQEEFQKLEK True NCI_RA007_Epitope_Rep2 1377.7139952576897 1377.7128899358602 60.154 2 -0.551436683519882 0.1577070806929971 1.0 ['nc|ENSG00000164304|Q8TC20-4|CAGE1', 'nc|ENSG00000164304|Q8TC20-2|CAGE1', 'nc|ENSG00000164304|Q8TC20|CAGE1', 'nc|ENSG00000164304|Q8TC20-3|CAGE1', 'ENSG00000164304|ENST00000502583|CAGE1'] 1508 14456 AEEPPTPALP True H1975_Epitope_Rep2 1020.5127762699999 1020.51166993586 60.761 2 -0.5514403713228464 0.1577070806929971 1.0 ['nc|ENSG00000023902|Q53GL0-2|PLEKHO1', 'ENSG00000023902|ENST00000369124|PLEKHO1'] 44426 6206 INIFGENPS True H1975_Epitope_Rep3 989.4818104948899 989.48070993586 28.884 2 -0.551449604294363 0.1577070806929971 1.0 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 104701 4419 STAVRHMAA True PC9_epitope_Rep5 942.4705346185399 942.46942993586 22.068 2 -0.5515423966453836 0.15771561922665542 1.0 ['ENSG00000095564|ENST00000265990|BTAF1'] 96361 7874 SEGEEVPQDK True H1975_Epitope_Rep1 1116.4934973774 1116.49240993586 35.238 2 -0.5515616949432265 0.15771561922665542 1.0 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-3|AIFM1', 'nc|ENSG00000156709|O95831-4|AIFM1'] 31298 7094 GDVVPSVPR True NCI_RA007_Epitope_Rep2 924.5028802926399 924.50178993586 32.217 2 -0.5515756251492225 0.15771561922665542 1.0 ['ENST00000600125.5_1_19:58238867-58238939:-|nuORF'] 125224 15532 VLQQSVLSV True PC9_epitope_Rep3 971.5651461960299 971.56404993586 64.893 2 -0.5517078828626931 0.15776168019835676 1.0 ['ENST00000522380.2_1_5:170346486-170397534:+|nuORF'] 113945 2843 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 15.521 3 -0.551738355582418 0.1577727722050268 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 53651 3240 KWNWRTKPQSR True NCI_RA007_Epitope_Rep4 1485.79531432657 1485.7936649037902 18.098 3 -0.5517437204887508 0.1577727722050268 1.0 ['nc|nan|Q49A92-3|C8orf34', 'nc|nan|Q49A92-2|C8orf34', 'ENSG00000165084|ENST00000518698|C8orf34'] 113151 6410 TQDAESIHY True H1975_Epitope_Rep2 1062.4618033263 1062.46127496793 29.579 1 -0.5518057554220248 0.15777961405725952 1.0 ['ENST00000498831.1_1_3:183854405-183855259:+|nuORF'] 92954 20632 RRPRRKRAHPA True NCI_RA007_Epitope_Rep1 1399.84974994127 1399.84864993586 84.479 2 -0.5518451846703605 0.15777961405725952 1.0 ['ENST00000460758.1_1_3:48511100-48514492:-|nuORF'] 109003 5301 TEVPEELT True H1975_Epitope_Rep2 916.4389426234 916.43784993586 25.446 2 -0.5518628173991025 0.15777961405725952 1.0 ['COL5A1|p.G1477Wfs*5|1|0.25|ENSG00000130635|chr9:134819033-134819034|-/C|frameshift_variant', 'nc|ENSG00000130635|P20908-2|COL5A1', 'ENSG00000130635|ENST00000371817|COL5A1', 'COL5A1|p.G1477Rfs*5|1|0.28|ENSG00000130635|chr9:134819035-134819035|T/CC|frameshift_variant', 'COL5A1|p.P765Lfs*39|1|0.16|ENSG00000130635|chr9:134772795-134772795|C/-|frameshift_variant'] 127265 18978 VQLAGSGPPQV True PC9_epitope_Rep3 1051.56620882519 1051.5651099358602 78.221 2 -0.5519394923603262 0.15777961405725952 1.0 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6', 'ENSG00000128159|ENST00000248846|TUBGCP6', 'nc|ENSG00000128159|Q96RT7-2|TUBGCP6', 'ENST00000498611.5_1_22:50657979-50682900:-|nuORF'] 108552 8247 TEGHPVGAIPP True H1975_Epitope_Rep1 1073.5505587610498 1073.54946993586 36.665 2 -0.5519506695579087 0.15777961405725952 1.0 ['ENST00000334512.9_1_10:81072492-81072669:+|nuORF'] 123671 7689 VINLSSHIE True PC9_epitope_Rep3 1010.5396597241801 1010.53856993586 34.573 2 -0.5519625545342645 0.15777961405725952 1.0 ['ANKRD26|p.R1462S|1|0.48|ENSG00000107890|chr10:27017622-27017622|T/A|missense_variant'] 23472 5155 EVYFFQCRRDF True NCI_RA007_Epitope_Rep1 1508.6870693171998 1508.6859699358602 24.135 2 -0.5519679281104954 0.15777961405725952 1.0 ['DZIP3|p.L867F|2|0.15|ENSG00000198919|chr3:108674089-108674089|A/T|missense_variant'] 45124 7158 IQVDDSYARK True NCI_RA007_Epitope_Rep2 1193.6040508858898 1193.6029499358601 32.465 2 -0.5519845254384262 0.15777961405725952 1.0 ['ENST00000461445.5_1_3:38051483-38071030:-|nuORF', 'ENSG00000187091|ENST00000334661|PLCD1', 'nc|ENSG00000187091|P51178-2|PLCD1'] 128000 23808 VRQLRHLHRTR True PC9_epitope_Rep5 1470.8756303359398 1470.87397490379 96.559 3 -0.5519855023328637 0.15777961405725952 1.0 ['nc|ENSG00000184274|P59091|LINC00315'] 73411 15129 NESAVIVAP True PC9_epitope_Rep6 898.4759968384599 898.47544496793 70.256 1 -0.5520224817418923 0.15777961405725952 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 127780 550 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 3.0619 3 -0.552139810170017 0.15782566429034348 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 117612 13150 VAGWSGGGPTI True PC9_epitope_Rep1 1000.4977949121999 1000.49668993586 55.446 2 -0.5521886887222971 0.15785295356598944 1.0 ['ENSG00000106410|ENST00000467773|NOBOX'] 112151 13789 TLVFQDNQG True PC9_epitope_Rep1 1020.4876241513198 1020.48652993586 57.884 2 -0.5522158911422382 0.15785295356598944 1.0 ['ENST00000304636.7_1_2:189849938-189851827:+|nuORF'] 11332 6292 DEYEAHQERVL True NCI_RA007_Epitope_Rep2 1387.6368075661499 1387.6351649037902 29.08 3 -0.5522308084411971 0.15789644222668653 1.0 ['ENST00000442955.2_1_9:6669517-6669934:-|nuORF', 'ENSG00000121481|ENST00000367510|RNF2'] 135169 9562 YASQPANL True PC9_epitope_Rep1 862.4184819623399 862.41738993586 41.638 2 -0.5522349363969083 0.15789644222668653 1.0 ['ENSG00000112078|ENST00000373731|KCTD20'] 68592 10389 LTYLNKHRR True H1975_Epitope_Rep1 1199.68872399971 1199.68762993586 44.91 2 -0.5523077827282388 0.15790496865229153 1.0 ['nc|ENSG00000069188|Q58EX2-3|SDK2'] 47128 13012 IWEEAYQR True H1975_Epitope_Rep1 1093.5192586327698 1093.5186749679299 55.133 1 -0.5523155995975172 0.15790496865229153 1.0 ['ENST00000496676.5_1_1:6272096-6272816:+|nuORF', 'ENST00000492476.1_1_1:6271125-6272816:+|nuORF', 'nc|ENSG00000158286|Q6ZRF8-4|RNF207', 'ENSG00000158286|ENST00000377939|RNF207'] 105137 12082 STLRSAKILR True PC9_epitope_Rep4 1143.7087907379498 1143.7076899358601 54.277 2 -0.5523160097283804 0.15790496865229153 1.0 ['ICE1|p.R1847I|1|0.12|ENSG00000164151|chr5:5464874-5464874|G/T|missense_variant'] 16650 5313 EESTDLVP True NCI_RA007_Epitope_Rep1 888.4076424951198 888.40654993586 24.747 2 -0.5523287656140589 0.15792457720469125 1.0 ['ENST00000493228.1_1_10:72647900-72647975:-|nuORF'] 3525 14671 AGLVGCLLE True NCI_RA007_Epitope_Rep3 873.46298962661 873.4624449679301 65.086 1 -0.5523579303431794 0.15792457720469125 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 110519 18273 TIQSDKFLN True PC9_epitope_Rep2 1064.5502244078798 1064.54912993586 75.608 2 -0.5523942527086181 0.15792457720469125 1.0 ['ENSG00000136052|ENST00000258538|SLC41A2'] 33557 18308 GLKIGDTV True PC9_epitope_Rep1 801.45961849833 801.45852993586 75.21 2 -0.5523947619359367 0.15792457720469125 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 79677 16839 PHLAPLVL True PC9_epitope_Rep6 858.53272386894 858.53162993586 77.286 2 -0.5523989404175276 0.15792457720469125 1.0 ['ENST00000378980.7_1_9:34581122-34589618:-|nuORF'] 13239 11841 DLVDRTRSWLY True H1975_Epitope_Rep3 1422.7255630009 1422.72446993586 50.694 2 -0.5524403742899956 0.15793565944212265 1.0 ['ENST00000504260.5_1_17:47783523-47784713:-|nuORF', 'ENST00000508607.1_1_17:47783523-47785148:-|nuORF'] 124866 22631 VLLLLLLLLLL True H1975_Epitope_Rep2 1247.9196183679899 1247.91852993586 93.49 2 -0.5524663168947767 0.15793565944212265 1.0 ['PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF'] 32795 7610 GIEANLQEKPT True H1975_Epitope_Rep1 1198.61936659686 1198.61826993586 34.264 2 -0.5525208358235849 0.15798169595853243 1.0 ['ENST00000487003.5_1_2:135927369-135933054:+|nuORF'] 56704 8110 LEAELGPSPP True H1975_Epitope_Rep1 1008.5127762699999 1008.51166993586 36.14 2 -0.5525502166217247 0.15801153297913698 1.0 ['ENSG00000149823|ENST00000279281|VPS51', 'nc|ENSG00000149823|Q9UID3-2|VPS51'] 8884 6167 AVFVSEGK True PC9_epitope_Rep3 835.4439684341899 835.44286993586 28.765 2 -0.5525695516951883 0.158025171291122 1.0 ['ENSG00000102879|ENST00000219150|CORO1A', 'ENST00000567034.5_1_16:30198370-30199113:+|nuORF'] 683 5902 AAVDAGMAM-[Oxidation] True NCI_RA007_Epitope_Rep5 851.35172530591 851.35062993586 29.389 2 -0.5526058577635808 0.15806608357628765 1.0 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 98123 13627 SIARGWRTV True PC9_epitope_Rep4 1044.58286194884 1044.5817699358602 60.309 2 -0.5526268643030195 0.15806608357628765 1.0 ['ENST00000542643.6_1_1:21923469-21929393:-|nuORF', 'ENST00000374763.6_2_1:21923469-21929399:-|nuORF'] 29037 11253 FTLSHGWAP True PC9_epitope_Rep1 1014.4923156089399 1014.49120993586 48.164 2 -0.552636476639024 0.15806608357628765 1.0 ['ENSG00000166278|ENST00000299367|C2'] 108835 7495 TEQRRRAE True H1975_Epitope_Rep2 1044.5424536888397 1044.5413499358601 33.779 2 -0.5526695430625191 0.158112113506422 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 127566 22143 VQVVIEEL True PC9_epitope_Rep1 927.5276980581499 927.52660993586 89.987 2 -0.5526861952434939 0.15814194551520844 1.0 ['nc|nan|Q9H972-2|C14orf93', 'ENSG00000100802|ENST00000299088|C14orf93'] 18120 6340 EILSQNYSV True NCI_RA007_Epitope_Rep3 1051.5185899264302 1051.51748993586 31.944 2 -0.5527328943535884 0.15815045752692525 1.0 ['ENSG00000105556|ENST00000264819|MIER2', 'ENST00000586994.7_1_19:327127-336164:-|nuORF', 'ENST00000587966.2_1_19:334309-344774:-|nuORF'] 125921 7093 VNYDEENWRK True PC9_epitope_Rep4 1351.61567819875 1351.61404490379 34.551 3 -0.5527414012514794 0.15815045752692525 1.0 ['ENSG00000166825|ENST00000300060|ANPEP', 'ENST00000559761.5_1_15:90340736-90342749:-|nuORF'] 95936 4221 SDYGIGEVP True NCI_RA007_Epitope_Rep2 935.4236269124299 935.42252993586 21.058 2 -0.5527490937127998 0.15815045752692525 1.0 ['nc|ENSG00000068120|Q13057-2|COASY', 'ENSG00000068120|ENST00000393818|COASY'] 14881 14186 DYGYFRFFQDR True PC9_epitope_Rep1 1512.6786128084798 1512.6775099358601 59.388 2 -0.552875902526755 0.15821267774430733 1.0 ['nc|ENSG00000144504|Q9P2S6-4|ANKMY1', 'nc|ENSG00000144504|Q9P2S6-2|ANKMY1', 'nc|ENSG00000144504|Q9P2S6|ANKMY1', 'ENSG00000144504|ENST00000401804|ANKMY1'] 71794 4000 MNPRRFLWKWK True NCI_RA007_Epitope_Rep2 1560.8499927517198 1560.84835490379 20.197 3 -0.5529025403007429 0.15822631058998818 1.0 ['ENST00000429378.5_3_16:242971-256079:-|nuORF'] 59833 20543 LHDSYYDTW True PC9_epitope_Rep5 1198.49310345458 1198.49200993586 84.063 2 -0.5529749656962986 0.15825613785061865 1.0 ['ENST00000407479.5_1_16:3713563-3713731:+|nuORF'] 110747 8204 TKHDQREYDDQ True NCI_RA007_Epitope_Rep5 1433.61713475073 1433.61602993586 38.236 2 -0.553036011417907 0.15827571130147522 1.0 ['MB21D2-FGF12|1|fusion', 'ENSG00000180611|ENST00000392452|MB21D2'] 23018 5880 EVKDVQLHLER True H1975_Epitope_Rep2 1364.7412130650398 1364.7395549037901 27.603 3 -0.5530520089860098 0.15827571130147522 1.0 ['nc|ENSG00000120656|Q16514-2|TAF12', 'ENST00000471683.5_1_1:28916264-28944539:-|nuORF', 'ENSG00000120656|ENST00000373824|TAF12'] 54568 19477 LAATTLQP True PC9_epitope_Rep5 813.45961849833 813.45852993586 79.971 2 -0.5530569451722492 0.15827571130147522 1.0 ['ENST00000441248.5_1_X:148622580-148622637:+|nuORF'] 138505 18789 YRIREFRQTFR True PC9_epitope_Rep4 1570.84807817542 1570.84642490379 80.357 3 -0.5530913923651525 0.15827571130147522 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 98697 12002 SIQWRRGL True PC9_epitope_Rep2 1014.5722972651398 1014.57120993586 51.483 2 -0.5531360750275501 0.15827571130147522 1.0 ['SPAG9|p.M1269Ifs*14|1|0.25|ENSG00000008294|chr17:50970743-50970750|TGACAAGC/-|frameshift_variant'] 47863 13557 IYTLKCRFC True NCI_RA007_Epitope_Rep2 1145.57255715893 1145.57144993586 57.373 2 -0.5532090435737216 0.15833792143019076 1.0 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ'] 33650 5161 GLPCICIHPV True NCI_RA007_Epitope_Rep3 1050.53544337422 1050.53434993586 27.294 2 -0.5533349085637363 0.1583677435025504 1.0 ['ENST00000360004.5_2_6:32546592-32546676:-|nuORF'] 102215 5929 SPSPPQAEA True PC9_epitope_Rep1 882.4083112014599 882.40720993586 27.619 2 -0.55339376495553 0.15838137185050846 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1'] 33852 18630 GLVLSLEEQL True PC9_epitope_Rep2 1099.61249031127 1099.6119749679299 77.026 1 -0.553435651395224 0.15839499975711255 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 60450 14258 LILFMFRR True H1975_Epitope_Rep3 1094.6422914012599 1094.6411899358602 60.185 2 -0.5535566085126798 0.15843844621836495 1.0 ['nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 22912 16042 EVFRAELL True PC9_epitope_Rep3 975.5389314481898 975.53782993586 66.855 2 -0.5535746089925039 0.15843844621836495 1.0 ['ENSG00000113248|ENST00000231173|PCDHB15'] 32972 8223 GISVKQAYSHC-[Carbamidomethyl] True H1975_Epitope_Rep3 1248.5921065826299 1248.59100993586 36.612 2 -0.5536327101458282 0.15846826424870467 1.0 ['ENST00000553649.2_1_14:21631058-21631286:+|nuORF'] 61755 10440 LLKAGAEV True PC9_epitope_Rep1 799.4803539429099 799.47924993586 45.045 2 -0.5537851039553708 0.15852789741264856 1.0 ['ENST00000582618.1_1_18:21946774-21948319:-|nuORF', 'ENST00000582350.5_1_18:21927721-21957497:-|nuORF', 'ENSG00000141447|ENST00000319481|OSBPL1A'] 127779 3 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 0.015673 3 -0.5538059806123813 0.15852789741264856 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 22447 6402 ETGERVQLA True H1975_Epitope_Rep2 1001.5141732523297 1001.51306993586 29.549 2 -0.553815060469263 0.1585389547309112 1.0 ['nc|ENSG00000170180|P02724-3|GYPA', 'nc|ENSG00000170180|P02724-2|GYPA', 'nc|ENSG00000170180|P02724|GYPA', 'ENSG00000170180|ENST00000641688|GYPA'] 105119 10357 STLPKSLSL True PC9_epitope_Rep2 944.55424715916 944.55314993586 45.164 2 -0.5538388819184866 0.1585389547309112 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 63603 14458 LPLPPPQLSI True NCI_RA007_Epitope_Rep4 1073.6484818971699 1073.64738993586 62.965 2 -0.553896538576734 0.15855257832105563 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 3456 12682 AGLICRYP True PC9_epitope_Rep1 891.46365833295 891.46256993586 53.653 2 -0.5539621275849165 0.15856363430310683 1.0 ['nc|ENSG00000174485|Q7Z401|DENND4A', 'nc|ENSG00000174485|Q7Z401-2|DENND4A', 'ENSG00000174485|ENST00000443035|DENND4A', 'ENST00000568515.1_1_15:66007788-66048788:-|nuORF'] 66094 9905 LSNNSLLVP True PC9_epitope_Rep1 955.5338460677499 955.53274993586 42.957 2 -0.5539737812578175 0.15856363430310683 1.0 ['ENSG00000226979|ENST00000418386|LTA'] 39318 18898 HLRRRAARQ True NCI_RA007_Epitope_Rep5 1162.69078968838 1162.68968993586 79.534 2 -0.554041965820286 0.1586096360575055 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|76|2|anti-sense'] 8418 20614 ATQTALDLLL True PC9_epitope_Rep2 1057.60192562757 1057.60137496793 84.726 1 -0.5541500268421894 0.15862325762113683 1.0 ['nc|ENSG00000198026|Q9H4Z2-2|ZNF335', 'ENSG00000198026|ENST00000322927|ZNF335'] 75594 17714 NQQLPIESQMV True PC9_epitope_Rep6 1285.63363676201 1285.63252993586 80.77 2 -0.5541944867511156 0.15865306783228103 1.0 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200'] 101302 9233 SLYERLAV True PC9_epitope_Rep6 949.5232813840498 949.52218993586 45.661 2 -0.5542383930829613 0.1586828770782406 1.0 ['PHC1|p.Q35L|1|0.38|ENSG00000111752|chr12:8917781-8917781|A/T|missense_variant'] 41704 18648 IDLNDDNICSV True PC9_epitope_Rep3 1219.53906767083 1219.53796993586 76.947 2 -0.554310888942004 0.15872373490465244 1.0 ['ENST00000493464.1_1_21:19186244-19191642:-|nuORF', 'ENST00000482915.1_1_21:19190494-19191672:-|nuORF', 'nc|ENSG00000154642|Q9NYK6-2|EURL', 'nc|ENSG00000154642|Q9NYK6-3|EURL', 'ENSG00000154642|ENST00000284881|C21orf91'] 122262 11577 VGRRRIKL True NCI_RA007_Epitope_Rep3 996.6668663563198 996.66576993586 52.668 2 -0.5543199816607901 0.15872373490465244 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2'] 43325 9464 IHERTHTREK True NCI_RA007_Epitope_Rep2 1305.6901805516898 1305.68908993586 41.424 2 -0.5543305244193626 0.15872373490465244 1.0 ['ENST00000406845.1_1_21:24463107-24463425:-|nuORF', 'ENSG00000188033|ENST00000311437|ZNF490'] 106270 9828 SVQLMEKRMDK True NCI_RA007_Epitope_Rep4 1363.69519147275 1363.6940899358601 44.652 2 -0.5543435415372849 0.15873221425449602 1.0 ['CON__Q2UVX4'] 12666 9722 DLEQEGLEA True H1975_Epitope_Rep2 1002.4505699362599 1002.44946993586 42.381 2 -0.5543902873794414 0.15873221425449602 1.0 ['ENSG00000141295|ENST00000290216|SCRN2', 'ENST00000581645.5_1_17:45915212-45916069:-|nuORF', 'ENST00000407215.7_1_17:45915212-45915578:-|nuORF'] 77032 8186 NVVKDSWYSK True NCI_RA007_Epitope_Rep2 1224.6138872936 1224.61278993586 36.477 2 -0.5544027658558757 0.15873221425449602 1.0 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7'] 65286 16233 LSEKEAALTKI True PC9_epitope_Rep1 1201.69180326113 1201.69015490379 67.258 3 -0.5544306468428426 0.15874583184952573 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 75002 9339 NLYRCMPVP True PC9_epitope_Rep1 1091.52560696651 1091.5245099358601 40.78 2 -0.5544820533045518 0.15875944900370675 1.0 ['ENST00000450473.1_1_20:52556707-52556815:+|nuORF'] 60146 12482 LHWTVQREL True PC9_epitope_Rep5 1180.63529144452 1180.6336349037902 53.011 3 -0.554520239268301 0.15880543865328586 1.0 ['ENST00000272638.13_1_2:136528297-136530038:+|nuORF'] 65264 6381 LSEGWGGG True NCI_RA007_Epitope_Rep4 761.3344179852099 761.33332993586 31.148 2 -0.5545813348361407 0.15881905440183874 1.0 ['ENST00000267328.4_1_13:111175537-111175825:-|nuORF'] 35916 8946 GVAKIGHVLI True NCI_RA007_Epitope_Rep4 1005.63350053937 1005.63240993586 41.243 2 -0.5546470432537887 0.15886247025880906 1.0 ['chr7:98320298-98355081|148|12.35|0.48|4.68|-|2|BAIAP2L1,None|1'] 46100 7973 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 37.356 2 -0.5546569777886949 0.15886247025880906 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 65753 21409 LSIEQLTTL True PC9_epitope_Rep4 1016.5753765265599 1016.5748749679301 90.523 1 -0.554768866580444 0.15886579918430763 1.0 ['nc|ENSG00000168610|P40763-3|STAT3', 'nc|ENSG00000168610|P40763-2|STAT3', 'ENSG00000168610|ENST00000264657|STAT3', 'ENST00000471989.5_1_17:40475518-40477070:-|nuORF'] 18490 19521 EKLTATIW True PC9_epitope_Rep1 960.5280324113199 960.52692993586 79.908 2 -0.55477131302688 0.15886579918430763 1.0 ['ENSG00000186416|ENST00000688521|NKRF', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 2284 10314 AEPQVERGSQE True H1975_Epitope_Rep1 1228.5683936531598 1228.5672899358601 44.62 2 -0.5547770155855211 0.15886579918430763 1.0 ['nc|ENSG00000167528|Q96N77-2|ZNF641', 'nc|ENSG00000167528|Q96N77-3|ZNF641', 'ENSG00000167528|ENST00000547026|ZNF641', 'nc|ENSG00000167528|Q96N77|ZNF641'] 5589 5475 ANTKNQKI True PC9_epitope_Rep6 915.5137793295099 915.51268993586 29.002 2 -0.5548363704285494 0.15886579918430763 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 13044 10279 DLRCLHQDP True PC9_epitope_Rep1 1095.51312770651 1095.51202993586 44.424 2 -0.5548477236527387 0.15886579918430763 1.0 ['ENST00000469537.1_1_1:156169610-156169919:+|nuORF', 'ENST00000423538.6_1_1:156163924-156169919:+|nuORF'] 106557 13134 SVVTWIGYF True PC9_epitope_Rep4 1070.54368247546 1070.5425899358602 58.414 2 -0.5548669153429229 0.1588794121931088 1.0 ['ENSG00000156097|ENST00000527748|GPR61'] 23633 8381 EYFWRIAWRFW True NCI_RA007_Epitope_Rep1 1658.8146527888198 1658.8129949037898 36.603 3 -0.5548857213972754 0.15889045330226084 1.0 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 104133 6251 SSAASAFKVP True NCI_RA007_Epitope_Rep3 963.5025459394699 963.50144993586 31.592 2 -0.554909780023791 0.15889045330226084 1.0 ['nc|ENSG00000163539|O75122-2|CLASP2', 'nc|ENSG00000163539|O75122|CLASP2', 'ENSG00000163539|ENST00000682230|CLASP2', 'nc|ENSG00000163539|O75122-3|CLASP2', 'ENST00000486796.1_1_3:33686156-33700574:-|nuORF'] 26570 10013 FIYRCLHPLY True H1975_Epitope_Rep3 1323.67979910879 1323.67816490379 43.553 3 -0.5549308672636399 0.1589176767595035 1.0 ['ENST00000389879.9_1_14:99977546-99977624:+|nuORF'] 20205 6354 ENTKASEEEED True NCI_RA007_Epitope_Rep1 1279.5051842599098 1279.50408993586 28.743 2 -0.5549401146116163 0.1589176767595035 1.0 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 68060 9036 LTNLTELQL True NCI_RA007_Epitope_Rep5 1043.58627556343 1043.5851699358602 41.415 2 -0.5549878139725581 0.15892871591552715 1.0 ['ENSG00000166159|ENST00000299194|LRTM2'] 89685 11871 REWSRLSREVI True H1975_Epitope_Rep3 1429.7789955560897 1429.77788993586 50.811 2 -0.5549958908289871 0.15892871591552715 1.0 ['nc|ENSG00000110888|Q6IMN6-6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-10|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-7|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-3|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-2|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-9|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-5|CAPRIN2'] 126640 9234 VPQKVVDKIT True NCI_RA007_Epitope_Rep5 1125.6757592741699 1125.67411490379 42.168 3 -0.55502348069269 0.1589559363723158 1.0 ['ENSG00000204228|ENST00000374662|HSD17B8'] 124297 11178 VLDIFFEVLNY True H1975_Epitope_Rep3 1370.7122043525399 1370.7111099358601 48.094 2 -0.555023958813738 0.1589559363723158 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1', 'ASIC1|p.C497*|1|0.25|ENSG00000110881|chr12:50081552-50081553|GC/-|frameshift_variant', 'ENSG00000110881|ENST00000447966|ASIC1', 'nc|ENSG00000110881|P78348-1|ASIC1'] 9932 6141 AYQETVEK True NCI_RA007_Epitope_Rep5 966.4658260775799 966.46472993586 30.302 2 -0.5550530183864558 0.1589669735756242 1.0 ['nc|ENSG00000155393|Q7Z4Q2-2|HEATR3', 'ENSG00000155393|ENST00000299192|HEATR3'] 73679 11603 NGPASAAVLP True PC9_epitope_Rep2 895.4763311916299 895.4752299358599 49.956 2 -0.5550563265200216 0.1589669735756242 1.0 ['ENSG00000119669|ENST00000238647|IRF2BPL'] 134301 20343 WRTRSLLKRKT True NCI_RA007_Epitope_Rep5 1443.8786500277097 1443.87700490379 85.186 3 -0.5551371779860506 0.15897029318490713 1.0 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 108022 7871 TDDRFRMDSRF True PC9_epitope_Rep5 1444.65174643764 1444.6501049037902 35.218 3 -0.5551589970980861 0.15897029318490713 1.0 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8'] 95304 12296 SAETHFGL True PC9_epitope_Rep5 860.4028318981999 860.40172993586 52.287 2 -0.555181523761484 0.15897029318490713 1.0 ['ENST00000368073.7_1_1:160187225-160187318:-|nuORF'] 64000 18154 LQAVSVSV True PC9_epitope_Rep2 801.45961849833 801.45852993586 75.132 2 -0.5551854930142013 0.15897029318490713 1.0 ['ENSG00000121764|ENST00000403528|HCRTR1'] 42481 9607 IERAIGLK True PC9_epitope_Rep2 898.5600012459399 898.55890993586 42.296 2 -0.5552162806441824 0.15897029318490713 1.0 ['ENSG00000107223|ENST00000224073|EDF1'] 40440 10117 HSDFQTLIS True PC9_epitope_Rep5 1046.50327421546 1046.5021699358601 43.899 2 -0.5553392672237673 0.15901626082032197 1.0 ['ENSG00000242550|ENST00000238508|SERPINB10'] 3719 6779 AGSPFPQAK True H1975_Epitope_Rep3 901.4657665079299 901.46466993586 31.029 2 -0.5554127793894037 0.1590272946430016 1.0 ['ENST00000470520.5_1_1:1244480-1246298:+|nuORF'] 96825 10451 SESIENLPS True PC9_epitope_Rep4 974.4556553167 974.45454993586 47.91 2 -0.5554159517635491 0.1590272946430016 1.0 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 19452 11686 ELPSSQNVSPA True H1975_Epitope_Rep1 1127.54586730343 1127.5447699358601 49.94 2 -0.5554224958505967 0.15904090085425834 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 106485 7187 SVVHKKDH True PC9_epitope_Rep4 948.5141136826799 948.5130099358599 34.947 2 -0.5555056952682808 0.15907068549887557 1.0 ['ENSG00000135090|ENST00000392533|TAOK3', 'TAOK3|p.T656*|1|0.79|ENSG00000135090|chr12:118161955-118161964|CTCGGGTGGA/-|frameshift_variant'] 68198 13324 LTQIAKVVI True PC9_epitope_Rep1 983.6379172134699 983.63682993586 56.11 2 -0.5555569677609241 0.15910046917974438 1.0 ['ENST00000468376.2_1_20:45867286-45947776:-|nuORF', 'nc|ENSG00000101040|Q9ULU4-3|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-6|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-19|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-17|ZMYND8', 'ENSG00000101040|ENST00000471951|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-11|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-10|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-13|ZMYND8', 'nc|ENSG00000101040|Q9ULU4|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-20|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-5|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-9|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-16|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-22|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-12|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-14|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-18|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-21|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-8|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-23|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-15|ZMYND8'] 74445 4470 NIYRLVTK True NCI_RA007_Epitope_Rep3 1005.5971150306499 1005.59600993586 24.4 2 -0.5556279593472424 0.15913025189691155 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 114613 21765 TSMLPGFLHRL True PC9_epitope_Rep5 1270.68561276522 1270.6845099358602 88.748 2 -0.5556742830532497 0.15913613200679447 1.0 ['ENSG00000131966|ENST00000254286|ACTR10'] 6545 6051 APVLLSQK True PC9_epitope_Rep6 854.5225531080599 854.52144993586 31.641 2 -0.555680104685484 0.15913613200679447 1.0 ['ENSG00000137628|ENST00000393743|DDX60'] 124459 6543 VLEVKMQVEY True NCI_RA007_Epitope_Rep1 1236.64241054056 1236.6413099358601 29.465 2 -0.5557010458794592 0.15913613200679447 1.0 ['nc|ENSG00000127054|Q5TA45-2|INTS11', 'nc|ENSG00000127054|Q5TA45-4|INTS11', 'nc|ENSG00000127054|Q5TA45-3|INTS11', 'ENSG00000127054|ENST00000435064|INTS11', 'nc|ENSG00000127054|Q5TA45-5|INTS11', 'ENST00000461514.6_1_1:1248044-1249114:-|nuORF', 'ENST00000478641.5_1_1:1248044-1248711:-|nuORF', 'ENST00000485710.5_1_1:1247522-1249186:-|nuORF', 'ENST00000470030.6_1_1:1247241-1248711:-|nuORF'] 75838 7179 NRDLATPVM-[Oxidation] True PC9_epitope_Rep5 1031.50698007735 1031.50588993586 32.58 2 -0.5557119292910688 0.15913613200679447 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 111546 10908 TLLVNELK True H1975_Epitope_Rep3 928.5593325396 928.55822993586 47.045 2 -0.5557559078188601 0.15914201135573205 1.0 ['nc|ENSG00000133110|Q15063-7|POSTN', 'nc|ENSG00000133110|Q15063-6|POSTN', 'nc|ENSG00000133110|Q15063-4|POSTN', 'nc|ENSG00000133110|Q15063-10|POSTN', 'nc|ENSG00000133110|Q15063-2|POSTN', 'nc|ENSG00000133110|Q15063-3|POSTN', 'nc|ENSG00000133110|Q15063-9|POSTN', 'nc|ENSG00000133110|Q15063-8|POSTN', 'nc|ENSG00000133110|Q15063-5|POSTN', 'POSTN|p.A819Sfs*9|2|0.58|ENSG00000133110|chr13:37564537-37564538|-/T|frameshift_variant', 'ENSG00000133110|ENST00000379747|POSTN', 'CON__Q2KJC7'] 45891 10047 ISRCNCRMYY True H1975_Epitope_Rep2 1307.55731810095 1307.55568490379 43.637 3 -0.5557754542612723 0.15914201135573205 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion'] 126255 13861 VPHDFPHAWG True PC9_epitope_Rep6 1161.5355774032498 1161.53392490379 65.138 3 -0.5558089191135477 0.15914201135573205 1.0 ['ENST00000215838.7_1_22:31011318-31011739:+|nuORF'] 102138 10684 SPREPVNV True PC9_epitope_Rep6 896.4715801643599 896.47048993586 51.911 2 -0.5558122067453117 0.15914201135573205 1.0 ['ENST00000275364.7_1_7:2769482-2769623:-|nuORF'] 46786 6652 IVDEKVRRRE True NCI_RA007_Epitope_Rep1 1298.74188177138 1298.74024490379 29.887 3 -0.5558434193806212 0.15915561307020382 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 14391 8655 DTEYKVTVTP True H1975_Epitope_Rep3 1151.5710194221099 1151.56992993586 38.287 2 -0.5559253691049415 0.15916663970754746 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF'] 58128 10514 LESDEHTCP True H1975_Epitope_Rep1 1029.40732522529 1029.4062299358602 45.394 2 -0.5559438969727184 0.15916663970754746 1.0 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-4|RBBP6'] 117365 12196 VAATRPQLTTG True PC9_epitope_Rep1 1113.61422164677 1113.6131299358601 51.77 2 -0.5559822965972124 0.15918024036361872 1.0 ['ENST00000443602.2_1:149673167-149673347:+|nuORF'] 120767 6130 VGCATYRPP True PC9_epitope_Rep2 962.4643866089398 962.46328993586 28.974 2 -0.5559974520540774 0.15919384057971014 1.0 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-12|MUC4', 'nc|ENSG00000145113|Q99102-13|MUC4'] 133452 22866 WGKKMKGKI True PC9_epitope_Rep3 1074.6372060208198 1074.63610993586 93.222 2 -0.5560367547424268 0.15922103969203893 1.0 ['ENST00000380693.7_1_X:11777712-11777841:+|nuORF'] 19634 12788 ELRRLEEL True PC9_epitope_Rep2 1056.5927579262 1056.5916699358602 54.491 2 -0.5560740001607432 0.15922103969203893 1.0 ['ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1'] 68549 15066 LTWIEYWP True PC9_epitope_Rep1 1106.54368247546 1106.5425899358602 62.771 2 -0.5561996071796363 0.1592993352418846 1.0 ['ENSG00000106804|ENST00000223642|C5'] 42383 5890 IENIQRVAA True NCI_RA007_Epitope_Rep5 1012.5665431783599 1012.56544993586 29.344 2 -0.5562309879435582 0.15931293265187293 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 25671 7071 FFERRYQERMK True NCI_RA007_Epitope_Rep2 1588.7932657212398 1588.79216993586 32.129 2 -0.5562719834491713 0.159313646214057 1.0 ['nc|ENSG00000188732|A4D161-3|FAM221A', 'nc|ENSG00000188732|A4D161-2|FAM221A', 'ENSG00000188732|ENST00000344962|FAM221A'] 82250 11162 PTLDVASL True H1975_Epitope_Rep1 814.44363408102 814.4430849679301 47.903 1 -0.556277232465245 0.159313646214057 1.0 ['ENSG00000074276|ENST00000261944|CDHR2'] 77727 10270 PAALAEEES True PC9_epitope_Rep2 915.4185415319901 915.41744993586 44.836 2 -0.5562947166337485 0.159313646214057 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 52565 2616 KPTLYYKDK True NCI_RA007_Epitope_Rep4 1154.63356010902 1154.63191490379 14.684 3 -0.5563036156494946 0.159313646214057 1.0 ['APOH|p.P219T|1|0.29|ENSG00000091583|chr17:66216917-66216917|G/T|missense_variant', 'ENSG00000091583|ENST00000205948|APOH'] 125119 9876 VLPKRQSNHRQ True H1975_Epitope_Rep3 1361.76401419829 1361.76290993586 43.017 2 -0.5563311444487407 0.159313646214057 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 99597 11833 SLFLKCRHLP True NCI_RA007_Epitope_Rep4 1212.68013346196 1212.6790299358602 52.496 2 -0.5563592023759596 0.159313646214057 1.0 ['ENST00000271636.11_2_1:151509992-151510136:+|nuORF'] 83312 15916 QALLC[Carbamidomethyl]LTEL True PC9_epitope_Rep5 1059.5634322233 1059.5623299358601 66.213 2 -0.5563913297742344 0.1593272418533193 1.0 ['SNRPA1|p.P88L|1|0.22|ENSG00000131876|chr15:101292008-101292008|G/A|missense_variant'] 109244 8162 TFWKKYRTFWK True H1975_Epitope_Rep1 1589.8507039443696 1589.84905490379 36.336 3 -0.55644715523591 0.1593570088621515 1.0 ['ENSG00000123171|ENST00000242819|CCDC70'] 15455 5993 EAPGECCKK True H1975_Epitope_Rep3 963.4153878111899 963.41428993586 28.065 2 -0.5565085572325463 0.15937060336044762 1.0 ['nc|ENSG00000198788|Q02817|MUC2'] 55861 19338 LDFHLIVKDKT True PC9_epitope_Rep2 1327.7499868435898 1327.7483549037902 79.757 3 -0.5565233407521814 0.15938162001326023 1.0 ['ENSG00000182271|ENST00000328886|TMIGD1'] 85533 15739 QLKQQIQSI True PC9_epitope_Rep4 1084.62405805448 1084.62296993586 68.464 2 -0.5565601352972604 0.15938162001326023 1.0 ['ENSG00000100138|ENST00000401959|SNU13'] 102281 4686 SPTRYQVPSPS True H1975_Epitope_Rep3 1217.60405088589 1217.6023949037901 23.148 3 -0.5565892868743111 0.15939521345407504 1.0 ['ENSG00000197768|ENST00000412566|STPG3', 'nc|ENSG00000197768|Q8N7X2-3|STPG3', 'nc|ENSG00000197768|Q8N7X2|STPG3', 'nc|ENSG00000197768|Q8N7X2-1|STPG3'] 19529 19384 ELQQLTLTGFG True H1975_Epitope_Rep3 1205.62920300457 1205.62867496793 81.246 1 -0.5566659780591894 0.15943856925713917 1.0 ['ENST00000591340.5_1_19:37039208-37045651:-|nuORF'] 18968 16330 ELFMRGLCL True PC9_epitope_Rep5 1080.5460080579198 1080.54490993586 67.809 2 -0.556677626265279 0.15943856925713917 1.0 ['ENST00000275262.11_1_6:163986120-163986207:+|nuORF'] 33585 13695 GLLASYNTL True PC9_epitope_Rep1 950.5072969667401 950.50618993586 57.53 2 -0.5567778426094386 0.1594495828212923 1.0 ['NECTIN3|p.D319Y|1|0.18|ENSG00000177707|chr3:111126221-111126221|G/T|missense_variant'] 122738 21114 VGVDEEIVYAK True H1975_Epitope_Rep3 1220.6288686513997 1220.6277699358602 88.193 2 -0.5568145420698453 0.1594495828212923 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.T612Dfs*15|1|0.34|ENSG00000092201|chr14:21361174-21361175|-/T|frameshift_variant', 'ENST00000556217.5_1_14:21837875-21852161:-|nuORF'] 14456 4904 DTQWTKVGRTP True H1975_Epitope_Rep2 1287.6571490879098 1287.6555149037902 23.946 3 -0.5568741523209007 0.15949293406202503 1.0 ['ENST00000537356.3_1_X:103357914-103358230:+|nuORF'] 68810 11389 LVDRYFTRWYK True H1975_Epitope_Rep1 1545.8092330552097 1545.80812993586 48.787 2 -0.5568811403102671 0.15949293406202503 1.0 ['ENST00000466200.1_1_9:111696724-111697970:+|nuORF', 'ENSG00000119328|ENST00000322940|ABITRAM'] 89686 12225 REWSRLSREVI True NCI_RA007_Epitope_Rep2 1429.7789955560897 1429.77788993586 52.151 2 -0.5569263051174884 0.159503945155866 1.0 ['nc|ENSG00000110888|Q6IMN6-6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-10|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-7|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-3|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-2|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-9|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-5|CAPRIN2'] 2659 6106 AETAAVTVA True NCI_RA007_Epitope_Rep3 831.43379767331 831.43270993586 31.006 2 -0.5569477181081505 0.159503945155866 1.0 ['ENST00000607016.1_1_6:34360304-34360421:-|nuORF'] 55577 19561 LCLFLAHLLF True PC9_epitope_Rep4 1188.6729228232 1188.6718299358602 83.365 2 -0.5569976402448661 0.15956603987129944 1.0 ['nc|ENSG00000131355|Q9BY15-2|ADGRE3', 'ADGRE3|p.Q577Rfs*41|1|0.24|ENSG00000131355|chr19:14630122-14630122|G/-|frameshift_variant', 'ENSG00000131355|ENST00000253673|ADGRE3', 'nc|ENSG00000127507|Q9UHX3-5|ADGRE2', 'nc|ENSG00000127507|Q9UHX3-4|ADGRE2', 'nc|ENSG00000127507|Q9UHX3-6|ADGRE2', 'nc|ENSG00000127507|Q9UHX3-3|ADGRE2', 'nc|ENSG00000127507|Q9UHX3-2|ADGRE2', 'ENSG00000127507|ENST00000315576|ADGRE2', 'nc|ENSG00000268758|Q86SQ3|ADGRE4P'] 33694 10841 GLPTPSDE True PC9_epitope_Rep5 814.3708630635799 814.36976993586 46.687 2 -0.5569990253154685 0.1595796281325788 1.0 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG', 'nc|ENSG00000188162|Q6ZRI0-2|OTOG'] 7780 14537 ASVPEM[Oxidation]SGVGT True PC9_epitope_Rep1 1049.46992586229 1049.4688299358602 60.74 2 -0.5570603098551732 0.15959321595447123 1.0 ['ENST00000505045.1_1_5:26903562-26988455:-|nuORF', 'CDH9|p.G782Efs*3|1|0.23|ENSG00000113100|chr5:26881161-26881162|-/T|frameshift_variant', 'ENSG00000113100|ENST00000231021|CDH9', 'CDH9|p.N262Kfs*15|1|0.14|ENSG00000113100|chr5:26905987-26905987|G/TC|frameshift_variant'] 95199 15744 SAALIVFG True NCI_RA007_Epitope_Rep2 776.4432401582 776.44269496793 65.958 1 -0.557175585175443 0.15966889237385415 1.0 ['ENSG00000205116|ENST00000378821|TMEM88B'] 55733 13930 LDDSALYLSDK True PC9_epitope_Rep3 1238.60304782638 1238.6019499358601 58.66 2 -0.5572278848103392 0.15966889237385415 1.0 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 842 8660 ADFHFSSTL True NCI_RA007_Epitope_Rep4 1023.4661604307499 1023.46506993586 40.093 2 -0.5572757145234374 0.15971223021582734 1.0 ['ENST00000477418.2_1_1:27206170-27212721:-|nuORF', 'ENSG00000142751|ENST00000374135|GPN2'] 133500 9704 WGWWRWWEHRL True NCI_RA007_Epitope_Rep2 1696.81638412432 1696.8152899358602 42.366 2 -0.557295951048997 0.15971223021582734 1.0 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 92467 3703 RQYKNQKESEK True NCI_RA007_Epitope_Rep1 1436.7371903137598 1436.73553490379 18.37 3 -0.5573058202506332 0.15972581479565442 1.0 ['ENSG00000076650|ENST00000170564|GPATCH1'] 5028 12658 ALLFHLKHF True PC9_epitope_Rep5 1124.64948495668 1124.64784490379 53.693 3 -0.5573308499191296 0.15973939893625622 1.0 ['nc|ENSG00000161944|P07307-3|ASGR2', 'nc|ENSG00000161944|P07307-2|ASGR2', 'ENSG00000161944|ENST00000691900|ASGR2', 'nc|ENSG00000161944|P07307|ASGR2'] 95815 17235 SDGSFFLY True NCI_RA007_Epitope_Rep5 934.4072485723 934.4067049679301 73.068 1 -0.5573786454808891 0.15976914869539913 1.0 ['nc|ENSG00000211892|P01861-1|IGHG4', 'nc|ENSG00000211892|P01861|IGHG4', 'nc|ENSG00000211893|P01859-1|IGHG2', 'nc|ENSG00000211896|P01857-1|IGHG1', 'nc|ENSG00000211897|P01860-1|IGHG3', 'nc|ENSG00000211893|P01859|IGHG2', 'nc|ENSG00000211896|P01857|IGHG1', 'nc|ENSG00000211897|P01860|IGHG3'] 120842 5984 VGDPGQRTL True PC9_epitope_Rep5 941.49304388493 941.49194993586 28.013 2 -0.5574683533116439 0.15982606165435412 1.0 ['ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'nc|ENSG00000117713|O14497-3|ARID1A'] 121803 12064 VGNALLNVVL True NCI_RA007_Epitope_Rep5 1010.61243074162 1010.61132993586 53.061 2 -0.557478853535995 0.15982606165435412 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 84181 6487 QESPEKLDKK True NCI_RA007_Epitope_Rep2 1200.6350166609998 1200.6339099358602 29.842 2 -0.5575103788875637 0.15982606165435412 1.0 ['ZNF236|p.C1724Wfs*46|1|0.31|ENSG00000130856|chr18:76959752-76959752|T/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'ZNF236|p.K993Sfs*28|1|0.16|ENSG00000130856|chr18:76913818-76913818|A/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36-2|ZNF236', 'ZNF236|p.M461Nfs*104|1|0.37|ENSG00000130856|chr18:76881473-76881474|-/A|frameshift_variant'] 49139 13451 KGIATLAVVL True PC9_epitope_Rep1 983.6379172134699 983.63682993586 56.598 2 -0.5575413001538227 0.15983964307652518 1.0 ['ENSG00000181773|ENST00000374024|GPR3'] 79131 7414 PGALDAVR True H1975_Epitope_Rep3 797.43955176009 797.43900496793 33.496 1 -0.5576005668415036 0.15989654893720198 1.0 ['ENST00000579023.5_1_17:73127274-73127802:-|nuORF', 'nc|ENSG00000125458|Q8TCD5-2|NT5C', 'ENSG00000125458|ENST00000245552|NT5C', 'ENST00000583655.5_1_17:73127274-73127514:-|nuORF'] 104980 18693 STIEEDLKKLI True PC9_epitope_Rep6 1287.7285826926698 1287.7274899358601 84.545 2 -0.5576044977365301 0.15989654893720198 1.0 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 5225 7225 ALQDVDHYCP True NCI_RA007_Epitope_Rep1 1159.49680893603 1159.49570993586 32.093 2 -0.55760796330131 0.15989654893720198 1.0 ['ENSG00000189067|ENST00000622633|LITAF'] 86418 13407 QQPRTPILL True PC9_epitope_Rep2 1064.6342288153598 1064.63312993586 56.85 2 -0.5576767075299506 0.15998319028915936 1.0 ['ENSG00000113083|ENST00000231004|LOX'] 113250 19517 TQEGNKFTV True PC9_epitope_Rep3 1022.5032742154599 1022.50216993586 80.304 2 -0.5577022828609366 0.15998319028915936 1.0 ['ENSG00000145384|ENST00000274024|FABP2'] 23058 7639 EVLAEGGF True PC9_epitope_Rep3 820.3966838885998 820.39558993586 34.382 2 -0.557735709099588 0.15998319028915936 1.0 ['ENSG00000115977|ENST00000409085|AAK1', 'nc|ENSG00000115977|Q2M2I8-2|AAK1', 'ENST00000495836.1_1_2:69771529-69870271:-|nuORF'] 132290 22547 VYLFTGELYP True PC9_epitope_Rep3 1200.60667665484 1200.60556993586 91.998 2 -0.5577371499358337 0.15998319028915936 1.0 ['nc|ENSG00000197847|A6NK97|SLC22A20P'] 136118 3253 YGEYEWVHKPR True NCI_RA007_Epitope_Rep1 1462.6993482530597 1462.69771490379 16.546 3 -0.5577479331819738 0.15999676741554872 1.0 ['ENSG00000117133|ENST00000370654|RPF1'] 13488 18803 DPEDLCTFAYI True H1975_Epitope_Rep3 1285.5536551058099 1285.55254993586 78.863 2 -0.5577642457197086 0.16001098954377233 1.0 ['ENSG00000064999|ENST00000360359|ANKS1A', 'UHRF1BP1-ANKS1A|1|fusion'] 86419 14290 QQPRTPILL True PC9_epitope_Rep3 1064.6342288153598 1064.63312993586 60.054 2 -0.5577671781128626 0.16001098954377233 1.0 ['ENSG00000113083|ENST00000231004|LOX'] 16722 9886 EEWGDVPLSPG True H1975_Epitope_Rep1 1184.5349682665599 1184.5338699358601 42.96 2 -0.5577758050931626 0.16001098954377233 1.0 ['ENSG00000188070|ENST00000433688|ZFTA'] 79640 8802 PHFLSILQHL True H1975_Epitope_Rep2 1203.67642798051 1203.67477490379 38.823 3 -0.5577779717893305 0.16001098954377233 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 78717 15726 PEERRRDRRP True PC9_epitope_Rep3 1365.7337766991698 1365.73213490379 65.649 3 -0.5577855270255505 0.16001098954377233 1.0 ['nc|ENSG00000183092|Q9BUH8|BEGAIN', 'ENSG00000183092|ENST00000554140|BEGAIN'] 12506 7089 DLAENARFER True PC9_epitope_Rep5 1219.5945488313498 1219.59289490379 32.234 3 -0.5578012981085037 0.16001098954377233 1.0 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 52164 3246 KLWNQEEKLC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 17.156 3 -0.5578333208581463 0.16001098954377233 1.0 ['ENST00000360128.10_1_8:33357937-33358054:+|nuORF'] 31245 8679 GDPGFPGG True PC9_epitope_Rep4 702.2973042004999 702.29675496793 40.876 1 -0.5579270749261214 0.16002197837715543 1.0 ['COL4A4|p.G885Rfs*12|1|0.36|ENSG00000081052|chr2:227056008-227056009|-/T|frameshift_variant', 'ENSG00000081052|ENST00000396625|COL4A4'] 12264 5753 DIRVLRIGP True NCI_RA007_Epitope_Rep4 1037.6345631685297 1037.6334699358601 28.747 2 -0.5579547927215699 0.16002197837715543 1.0 ['KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion', 'nc|ENSG00000063015|Q53EL9-2|SEZ6', 'nc|ENSG00000063015|Q53EL9-3|SEZ6', 'ENSG00000063015|ENST00000317338|SEZ6'] 129776 17811 VTKRTRSL True NCI_RA007_Epitope_Rep2 959.5876129761099 959.58650993586 74.02 2 -0.5580163486804306 0.1600355526826115 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 64355 6803 LQNVQVPPP True H1975_Epitope_Rep2 990.5498304850599 990.54872993586 31.085 2 -0.5580444518019657 0.16004912654934472 1.0 ['ENST00000531236.1_1_11:71192815-71195619:+|nuORF'] 34535 4471 GQENLKTDL True NCI_RA007_Epitope_Rep5 1016.51383889916 1016.51274993586 23.847 2 -0.5580749069585249 0.16006011343987847 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4'] 19603 10454 ELRKQVAELGK True NCI_RA007_Epitope_Rep2 1269.74048478905 1269.7393899358601 45.257 2 -0.5580766627661768 0.16006011343987847 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 75146 9523 NNDFEGNPL True NCI_RA007_Epitope_Rep5 1018.4355885784599 1018.43448993586 43.266 2 -0.5582190749636302 0.16011957663407933 1.0 ['KIAA1755|p.S155N|1|0.33|ENSG00000149633|chr20:38241667-38241667|C/T|missense_variant'] 13667 10223 DQDDDFEFTG True NCI_RA007_Epitope_Rep4 1187.4254773872299 1187.42438993586 46.178 2 -0.5582431473656113 0.16011957663407933 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 98338 9252 SIGQLKTLDLS True NCI_RA007_Epitope_Rep1 1173.66050313285 1173.6594099358601 39.985 2 -0.55827581023003 0.16012021133929005 1.0 ['ENSG00000204478|ENST00000602960|PRAMEF20'] 92904 24829 RRPFWKRRK True NCI_RA007_Epitope_Rep1 1328.8054255177997 1328.80487496793 102.78 1 -0.5583319081684225 0.16012021133929005 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7'] 119539 12527 VERAEEAL True PC9_epitope_Rep2 915.4661604307498 915.46506993586 53.492 2 -0.5583440267885682 0.16012021133929005 1.0 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF', 'ENST00000587163.1_1_18:21113286-21114508:-|nuORF'] 6407 8421 APSEVAAIAP True H1975_Epitope_Rep2 924.4916469025998 924.49054993586 37.343 2 -0.5583467276410407 0.16012021133929005 1.0 ['nc|ENSG00000180329|Q96MW1-2|CCDC43', 'ENSG00000180329|ENST00000315286|CCDC43'] 47170 9259 IWRYFHDTLLR True NCI_RA007_Epitope_Rep1 1518.8095674083797 1518.80791490379 40.012 3 -0.5583532978425392 0.16012021133929005 1.0 ['ENSG00000197594|ENST00000647893|ENPP1', 'ENPP1|p.I889Sfs*24|1|0.15|ENSG00000197594|chr6:131890396-131890396|G/-|frameshift_variant'] 62165 11136 LLPHQDSVP True PC9_epitope_Rep2 1004.52909504048 1004.52798993586 48.16 2 -0.5583536287708716 0.16012021133929005 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant'] 99693 5765 SLGELGLVDLD True NCI_RA007_Epitope_Rep3 1129.58666948625 1129.5855699358601 29.659 2 -0.558377401503954 0.1601311941576592 1.0 ['ENST00000379619.5_1_2:28635552-28635666:+|nuORF'] 45443 9676 ISEASYVWHPE True NCI_RA007_Epitope_Rep5 1316.60371653272 1316.60260993586 43.854 2 -0.5583823827271475 0.1601311941576592 1.0 ['POLQ|p.Y758Rfs*36|1|0.31|ENSG00000051341|chr3:121496811-121496815|CATAA/-|frameshift_variant'] 3571 9308 AGPAIPTPA True PC9_epitope_Rep5 793.43340375049 793.43230993586 40.756 2 -0.5584106272144825 0.16016092028306458 1.0 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2', 'ENST00000470046.1_1_22:50881704-50882673:+|nuORF'] 107617 8715 TAGSFSLSVR True PC9_epitope_Rep6 1023.53490869691 1023.53380993586 43.379 2 -0.5584806171232412 0.1602068018418289 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 80690 12853 PLPVPPPTG True PC9_epitope_Rep2 873.49600400705 873.49490993586 54.739 2 -0.558503867524776 0.16022036965232003 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 129777 17914 VTKRTRSL True NCI_RA007_Epitope_Rep2 959.5876129761099 959.58650993586 74.419 2 -0.5585250741103283 0.16023393702441152 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 62745 17633 LLYRRSSYRQK True NCI_RA007_Epitope_Rep2 1468.8262801016801 1468.8251899358602 73.329 2 -0.5585477754818703 0.16024750395812465 1.0 ['ENSG00000135912|ENST00000392102|TTLL4'] 59202 23341 LGFVLAVTV True PC9_epitope_Rep1 917.5586042636098 917.55750993586 94.572 2 -0.5586297672093666 0.1602558924734657 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A', 'ATP9A|p.I162Yfs*4|1|0.11|ENSG00000054793|chr20:51697436-51697437|-/ATAA|frameshift_variant'] 16660 6387 EETLDEGPP True H1975_Epitope_Rep2 985.4240208352498 985.42292993586 29.491 2 -0.5586378924543896 0.1602558924734657 1.0 ['ENSG00000100442|ENST00000396062|FKBP3'] 101048 7834 SLTLSAPS True NCI_RA007_Epitope_Rep4 774.41233395274 774.4117849679301 36.832 1 -0.5587050637680627 0.1602558924734657 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 22120 7007 ESWVEFPP True H1975_Epitope_Rep3 989.4494477374499 989.44834993586 31.916 2 -0.5589015856006154 0.1603450504006203 1.0 ['ENST00000338779.10_1_16:70695390-70695915:-|nuORF'] 71222 15614 MFVFKDRWFWR True PC9_epitope_Rep6 1616.8074592333996 1616.8063699358602 72.263 2 -0.5589201188438447 0.1603450504006203 1.0 ['ENSG00000125966|ENST00000246186|MMP24'] 123050 13867 VGYREGPTV True PC9_epitope_Rep5 976.4977949121999 976.49668993586 58.36 2 -0.5589275414626833 0.1603450504006203 1.0 ['ENSG00000163807|ENST00000296121|KIAA1143'] 12911 14026 DLMRRQEELRR True H1975_Epitope_Rep1 1500.7943283503998 1500.7932299358602 59.115 2 -0.5590067447123154 0.16039092157337856 1.0 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ', 'ENSG00000121390|ENST00000338910|PSPC1', 'nc|ENSG00000121390|Q8WXF1-2|PSPC1', 'nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000471419.6_1_X:70511819-70517312:+|nuORF', 'ENST00000473525.1_1_X:70516758-70517827:+|nuORF'] 74323 14934 NILSDSYW True H1975_Epitope_Rep2 996.4552613938799 996.45471496793 62.596 1 -0.5590417342250822 0.16040250028265468 1.0 ['ENSG00000182463|ENST00000371497|TSHZ2', 'nc|ENSG00000182463|Q9NRE2-2|TSHZ2', 'TSHZ2|p.A130S|3|0.17|ENSG00000182463|chr20:53253846-53253846|G/T|missense_variant'] 47053 4957 IVSWFGDTHY True NCI_RA007_Epitope_Rep1 1223.56112344475 1223.56002993586 23.365 2 -0.559047374366279 0.16040250028265468 1.0 ['ZHX1|p.R712H|1|0.25|ENSG00000165156|chr8:123253812-123253812|C/T|missense_variant'] 14960 13119 DYQVKDILL True PC9_epitope_Rep4 1105.60192562757 1105.60082993586 58.356 2 -0.5591142126817038 0.16040250028265468 1.0 ['ENST00000463021.1_1_6:99858595-99858832:-|nuORF'] 84474 16590 QGLVHPPALS True PC9_epitope_Rep5 1017.5607295219298 1017.55962993586 68.819 2 -0.5591310831066657 0.16040250028265468 1.0 ['ENST00000540915.5_1_12:6797747-6797840:-|nuORF'] 101091 11976 SLTVTDLEI True PC9_epitope_Rep6 989.52809198097 989.52698993586 57.332 2 -0.5591453881496216 0.16040250028265468 1.0 ['nc|ENSG00000128604|Q13568-5|IRF5'] 71224 12687 MFVFKERWFWR True NCI_RA007_Epitope_Rep1 1630.8231092975398 1630.82200993586 53.333 2 -0.5591869433175668 0.16040250028265468 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 112120 16126 TLTVLNILN True PC9_epitope_Rep2 999.5964463243099 999.59534993586 67.285 2 -0.5591936441413695 0.16040250028265468 1.0 ['ENSG00000091262|ENST00000205557|ABCC6', 'nc|ENSG00000091262|O95255-3|ABCC6', 'ABCC6|p.Y695Tfs*14|1|0.5|ENSG00000091262|chr16:16182577-16182577|G/-|frameshift_variant', 'ENST00000574094.5_1_16:16275679-16317348:-|nuORF'] 19852 16438 ELVITWETVP True PC9_epitope_Rep1 1185.6281403754099 1185.6270499358602 68.052 2 -0.5592288692489253 0.16040250028265468 1.0 ['ENSG00000144619|ENST00000418658|CNTN4', 'nc|ENSG00000144619|Q8IWV2-3|CNTN4', 'nc|ENSG00000144619|Q8IWV2-4|CNTN4'] 86655 14017 QRGPPIIL True PC9_epitope_Rep2 892.5494365622399 892.54832993586 59.195 2 -0.5592567057695382 0.16041606098782182 1.0 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-2|PTK7', 'nc|ENSG00000112655|Q13308-3|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7'] 57293 11720 LEGILRELKE True NCI_RA007_Epitope_Rep1 1198.6921376142998 1198.69104993586 49.564 2 -0.5592623463920169 0.1604296212549463 1.0 ['ENSG00000205363|ENST00000569673|INSYN1'] 81409 14429 PPYEQVVK True H1975_Epitope_Rep1 958.5123823471798 958.5118349679301 60.696 1 -0.5593499944006405 0.1604593319981911 1.0 ['nc|ENSG00000154978|Q96AW1-4|VOPP1', 'nc|ENSG00000154978|Q96AW1-2|VOPP1', 'nc|ENSG00000154978|Q96AW1-3|VOPP1', 'ENSG00000154978|ENST00000285279|VOPP1'] 117377 21046 VACALLVFCF True NCI_RA007_Epitope_Rep5 1084.5449454287598 1084.5438499358602 87.962 2 -0.559371742809443 0.16047029942827612 1.0 ['nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6', 'ENST00000552090.1_1_12:49167835-49170266:-|nuORF'] 17034 12119 EGLVLSLEE True PC9_epitope_Rep3 987.51244191683 987.51134993586 51.659 2 -0.5593824884843083 0.16047029942827612 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 16082 5828 EEDIEKHPELK True H1975_Epitope_Rep1 1365.6776097489699 1365.6759749037901 27.488 3 -0.5594211404638798 0.16053230833831295 1.0 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D'] 69793 19695 LWRRECRREDR True H1975_Epitope_Rep3 1573.8008107131698 1573.7997099358602 82.485 2 -0.5594630042413709 0.16054586563307494 1.0 ['ENST00000303538.12_1_4:39929740-39979529:-|nuORF'] 35997 19608 GVCRYLRIR True PC9_epitope_Rep3 1134.6444166595797 1134.64276490379 80.659 3 -0.5595050640826893 0.1605917217099207 1.0 ['chr12:54284317-54285974|502|110.72|0.0|23.4|+|0|HNRNPA1,HNRNPA1|2'] 107243 10892 SYPRRFSTL True PC9_epitope_Rep3 1125.59309227937 1125.59143490379 46.879 3 -0.5595810363388976 0.16062142695649365 1.0 ['ENST00000403825.7_1_7:112090541-112090697:+|nuORF'] 41890 19181 IDYAKRRLYWT True PC9_epitope_Rep3 1483.7935829910698 1483.79194490379 78.998 3 -0.5596121401046509 0.16066728033202526 1.0 ['ENSG00000070018|ENST00000261349|LRP6'] 113950 3061 TRKDKEESKKK True PC9_epitope_Rep4 1375.7783268497494 1375.77667490379 17.516 3 -0.5596337037101535 0.1606782398062172 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 68167 7355 LTPSTGTMEL True NCI_RA007_Epitope_Rep3 1048.51106201784 1048.50996993586 36.055 2 -0.5596413670969876 0.1606782398062172 1.0 ['ENST00000502744.1_1_4:101404610-101439092:-|nuORF', 'ENST00000506323.1_1_4:101395197-101439143:-|nuORF'] 106713 5397 SYCFKEKKCKK True NCI_RA007_Epitope_Rep1 1390.7101132608998 1390.70845490379 25.067 3 -0.5596657662646536 0.1607079417369118 1.0 ['nc|ENSG00000196159|Q6V0I7-2|FAT4'] 128761 7307 VSQGREVTL True PC9_epitope_Rep4 987.5349086969098 987.53380993586 35.436 2 -0.5597511050415627 0.1607272609839983 1.0 ['ENST00000382363.7_1_22:30775266-30775527:-|nuORF'] 22495 5822 ETIQAIAN True NCI_RA007_Epitope_Rep3 858.4446967101799 858.44358993586 29.88 2 -0.5597666917927601 0.1607272609839983 1.0 ['ENSG00000103671|ENST00000261884|TRIP4'] 30348 4146 GAEEEEDRKAR True NCI_RA007_Epitope_Rep2 1288.6007564105998 1288.59964993586 20.766 2 -0.5598191957938293 0.1607272609839983 1.0 ['ENST00000541602.5_1_11:113934022-114057819:+|nuORF', 'nc|ENSG00000109906|Q05516-2|ZBTB16', 'ZBTB16|p.K497Sfs*121|1|0.48|ENSG00000109906|chr11:114242199-114242199|G/-|frameshift_variant', 'ENSG00000109906|ENST00000335953|ZBTB16', 'ZBTB16|p.P283Rfs*64|1|0.1|ENSG00000109906|chr11:114064145-114064145|C/-|frameshift_variant'] 115156 6089 TVAEAVTHA True PC9_epitope_Rep2 897.4555957470501 897.45448993586 28.814 2 -0.5598335700378005 0.1607272609839983 1.0 ['ENST00000475841.2_1_12:132611152-132611335:+|nuORF'] 64066 7108 LQDSCFLQIK True PC9_epitope_Rep6 1193.6114447654497 1193.61034993586 36.386 2 -0.5598803324591449 0.1607272609839983 1.0 ['ENSG00000102699|ENST00000381989|PARP4'] 91119 15857 RLNAKEIV True PC9_epitope_Rep1 941.56581490237 941.56470993586 65.806 2 -0.559920064520405 0.1607705100673308 1.0 ['ENST00000307241.5_1_12:94942028-94943309:+|nuORF', 'ENSG00000172340|ENST00000307227|SUCLG2', 'nc|ENSG00000172340|Q96I99-2|SUCLG2'] 100835 6935 SLSAGPAVAA True NCI_RA007_Epitope_Rep5 842.4497820906199 842.44868993586 33.36 2 -0.5600559761660631 0.1607705100673308 1.0 ['ENST00000315872.10_1_2:11484261-11484312:-|nuORF'] 57865 9766 LEQEKLSGV True PC9_epitope_Rep1 1001.5393253710098 1001.53822993586 42.426 2 -0.5600986882381127 0.16081375635747155 1.0 ['ENSG00000164603|ENST00000297145|BMT2'] 73297 8336 NEKERTRFENL True H1975_Epitope_Rep1 1434.7215402496197 1434.7204499358602 36.995 2 -0.560102910657409 0.16081375635747155 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6'] 101053 8086 SLTNRQVI True PC9_epitope_Rep2 929.52942939365 929.52832993586 36.46 2 -0.5601284229034657 0.16082730560578662 1.0 ['ENSG00000198633|ENST00000433050|ZNF534', 'nc|ENSG00000198633|Q76KX8|ZNF534'] 61914 13033 LLLLLLLL True NCI_RA007_Epitope_Rep3 922.68307650074 922.68196993586 58.538 2 -0.5601570813028219 0.16083825761245116 1.0 ['ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'UCN3|p.P18H|1|0.47|ENSG00000178473|chr10:5373773-5373773|C/A|missense_variant', 'PLBD1|p.N149Ifs*17|1|0.25|ENSG00000121316|chr12:14540881-14540881|C/-|frameshift_variant', 'ENSG00000183971|ENST00000566435|NPW', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000182685|ENST00000328540|BRICD5', 'ENSG00000117899|ENST00000261758|MESD', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENSG00000184709|ENST00000371542|LRRC26', 'FAT1|p.H507Rfs*6|1|0.13|ENSG00000083857|chr4:186708307-186708308|AT/-|frameshift_variant', 'ENSG00000121316|ENST00000240617|PLBD1', 'FAT1|p.N618Tfs*9|1|0.18|ENSG00000083857|chr4:186707975-186707975|T/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENSG00000178473|ENST00000380433|UCN3', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENSG00000070031|ENST00000176195|SCT', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'nc|ENSG00000117899|Q14696-2|MESD', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-4|SHBG', 'nc|ENSG00000129214|P04278-3|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000129214|P04278-5|SHBG', 'ENSG00000129214|ENST00000380450|SHBG', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000125810|ENST00000246006|CD93', 'ENSG00000109758|ENST00000382774|HGFAC', 'SHBG|p.L175Afs*39|1|0.14|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'CD93|p.E121Rfs*79|1|0.71|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'ENSG00000167680|ENST00000586582|SEMA6B', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ADGRB1|p.D708Tfs*49|1|0.15|ENSG00000181790|chr8:142481700-142481700|G/-|frameshift_variant', 'ATRN-TNKS2|2|fusion', 'ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant', 'ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000162337|ENST00000294304|LRP5', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 57667 12299 LEMIFFIAI True PC9_epitope_Rep1 1095.6038402038698 1095.6027499358602 52.163 2 -0.5601652702681532 0.16083825761245116 1.0 ['ENSG00000168158|ENST00000304936|OR2C1'] 15277 10747 EAGVTGIRRW True H1975_Epitope_Rep1 1143.61489035311 1143.61378993586 46.303 2 -0.5602141957023505 0.16086275649408308 1.0 ['RC3H2|p.R156Pfs*98|1|0.31|ENSG00000056586|chr9:122890428-122890429|-/G|frameshift_variant'] 93156 19089 RRRRPPPA True NCI_RA007_Epitope_Rep4 1004.6104141093598 1004.60930993586 82.573 2 -0.5603151621434653 0.16086275649408308 1.0 ['ENST00000397992.5_1_16:72984846-73092758:-|nuORF'] 105122 11360 STLPKSLSL True PC9_epitope_Rep3 944.55424715916 944.55314993586 48.701 2 -0.5603195873595483 0.16086275649408308 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 68553 6610 LTWKRWRRCWE True H1975_Epitope_Rep1 1618.8303199362997 1618.82866490379 30.481 3 -0.5603898992520181 0.16086591547476833 1.0 ['ENST00000415950.4_2_19:35528037-35528250:+|nuORF'] 55353 10060 LASLEDEL True PC9_epitope_Rep6 888.4440280038399 888.44292993586 49.287 2 -0.5604009327943901 0.16086591547476833 1.0 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 113073 15136 TPWPRGRLLTA True PC9_epitope_Rep5 1266.71968977482 1266.7180349037899 63.226 3 -0.5604746304577055 0.16086591547476833 1.0 ['ENSG00000165898|ENST00000556816|ISCA2', 'nc|ENSG00000165898|Q86U28-2|ISCA2', 'ENST00000555139.1_1_14:74960477-74961199:+|nuORF'] 113949 3984 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 20.233 3 -0.5605376643836028 0.16086591547476833 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 20556 6485 EQDLERLRDP True H1975_Epitope_Rep1 1269.6313282628898 1269.6302299358601 30.006 2 -0.5605416414853494 0.16086591547476833 1.0 ['ENSG00000126088|ENST00000246337|UROD', 'ENST00000494399.5_1_1:45478966-45479784:+|nuORF', 'ENST00000460906.5_1_1:45478985-45479553:+|nuORF', 'ENST00000496439.1_1_1:45478597-45479553:+|nuORF'] 73404 16850 NESAVIVAP True PC9_epitope_Rep2 898.4759968384599 898.47544496793 70.062 1 -0.5605946755369289 0.16087167070217917 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 15729 13146 EDDFIEEGI True H1975_Epitope_Rep2 1065.45023558309 1065.44967496793 55.688 1 -0.5606036768559496 0.16087167070217917 1.0 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 106227 3999 SVPPAAEPVP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 20.508 2 -0.5606130801560684 0.16087167070217917 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 138910 14106 YSEDKSSWD True H1975_Epitope_Rep2 1115.44073352855 1115.43962993586 59.414 2 -0.5606146321969512 0.16087167070217917 1.0 ['nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2', 'nc|ENSG00000138162|O95359-5|TACC2', 'nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 56933 6769 LEDSLQAQ True H1975_Epitope_Rep2 902.4345259493 902.43342993586 30.952 2 -0.5607599437043077 0.1609284457572676 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 45763 3126 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 16.557 2 -0.5607628872729427 0.1609284457572676 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 79069 16215 PFSSLGLP True H1975_Epitope_Rep2 816.4381547777599 816.43760496793 67.58 1 -0.5607921578288785 0.1609284457572676 1.0 ['ENST00000426282.6_1_22:45534715-45559573:-|nuORF'] 62765 21559 LMDFTIQI True PC9_epitope_Rep2 979.50485443859 979.50374993586 88.396 2 -0.5608408233865952 0.16094773879079377 1.0 ['ENST00000433049.5_1_5:139918555-139918624:+|nuORF'] 86852 14080 QRQGRQRF True NCI_RA007_Epitope_Rep4 1074.5795079038996 1074.57840993586 61.443 2 -0.560862067871484 0.16094773879079377 1.0 ['ENST00000512188.1_1_4:174320275-174324278:-|nuORF', 'ENST00000296506.7_1_4:174320275-174320425:-|nuORF'] 47283 19574 IYFEYSHAF True PC9_epitope_Rep2 1175.52876068731 1175.52766993586 80.673 2 -0.5609142033395078 0.16094773879079377 1.0 ['ENSG00000113318|ENST00000265081|MSH3'] 138603 17508 YRQRCWRLWMR True NCI_RA007_Epitope_Rep1 1652.8292743904797 1652.8281699358602 72.234 2 -0.5609201636369598 0.16094773879079377 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|452|3|anti-sense'] 135035 20558 YAIEVDPVL True PC9_epitope_Rep4 1017.5382627418498 1017.53767496793 87.227 1 -0.5609383237143413 0.16094773879079377 1.0 ['nc|ENSG00000122643|Q9H0P0-3|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-2|NT5C3A', 'nc|ENSG00000122643|Q9H0P0-1|NT5C3A', 'ENSG00000122643|ENST00000610140|NT5C3A', 'nc|ENSG00000122643|Q9H0P0|NT5C3A', 'ENST00000441170.1_1_4:118496697-118497264:-|nuORF'] 92675 26726 RRGPKILLLLL True H1975_Epitope_Rep1 1290.8863611770998 1290.8852699358602 111.29 2 -0.5609509246426214 0.16096128084701172 1.0 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2'] 61563 16004 LLGLKKLSFYY True NCI_RA007_Epitope_Rep4 1343.78530972315 1343.7842099358602 69.43 2 -0.5609906561636718 0.1609722244637756 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 12119 9834 DIGVDISLTG True H1975_Epitope_Rep3 988.5076908895601 988.50658993586 42.855 2 -0.5610165416558504 0.1609722244637756 1.0 ['CETP|p.G226E|1|0.3|ENSG00000087237|chr16:56972010-56972010|G/A|missense_variant', 'nc|ENSG00000087237|P11597-2|CETP', 'ENSG00000087237|ENST00000200676|CETP'] 120905 8581 VGEAQETEAAP True NCI_RA007_Epitope_Rep2 1100.4985827578398 1100.4974899358601 38.022 2 -0.5611235368959647 0.16103418224072819 1.0 ['nc|ENSG00000182938|Q7RTS5|OTOP3'] 77853 14434 PAGGSFCLDP True PC9_epitope_Rep3 962.4167677101799 962.41566993586 60.625 2 -0.5611350103578031 0.16104252400548696 1.0 ['ENST00000503734.1_1_17:48193554-48195689:-|nuORF', 'ENST00000508892.5_1_17:48190259-48195083:-|nuORF', 'ENSG00000167100|ENST00000330175|SAMD14', 'nc|ENSG00000167100|Q8IZD0-2|SAMD14'] 83519 12461 QDKIFRAHKVV True NCI_RA007_Epitope_Rep5 1339.77245362367 1339.7713499358601 54.588 2 -0.5611356363944302 0.16104252400548696 1.0 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44', 'ENST00000529348.1_1_11:130109693-130131768:-|nuORF', 'nc|ENSG00000196323|Q8NCP5-3|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-4|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-2|ZBTB44'] 70416 11813 LYQNLNEP True H1975_Epitope_Rep3 989.4818104948899 989.48070993586 50.586 2 -0.561157128243384 0.16104252400548696 1.0 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000487692.1_1_7:91726485-91729288:+|nuORF'] 20858 12608 EQQRRYHEEKE True NCI_RA007_Epitope_Rep2 1530.7175174983402 1530.71642993586 53.656 2 -0.5611856846859966 0.16105606300229158 1.0 ['ENSG00000183431|ENST00000373019|SF3A3', 'ENST00000470585.5_1_1:38445118-38455637:-|nuORF'] 33896 11957 GLYECNRYLCI True PC9_epitope_Rep5 1345.61587852289 1345.61422490379 50.99 3 -0.5612239352395862 0.16108054027013508 1.0 ['GJD2|p.P235L|1|0.16|ENSG00000159248|chr15:34752740-34752740|G/A|missense_variant'] 18933 14870 ELEVLAKKSP True PC9_epitope_Rep1 1112.6441247927198 1112.64302993586 62.016 2 -0.5612715660649091 0.16108054027013508 1.0 ['ENST00000423095.7_1_2:85614321-85618082:+|nuORF', 'ENST00000410106.5_1_2:85598540-85618082:+|nuORF', 'ENSG00000115459|ENST00000409013|ELMOD3', 'ENST00000490508.5_1_2:85582731-85618082:+|nuORF', 'ENST00000446464.7_1_2:85617824-85618082:+|nuORF'] 81583 7854 PRLEPREAVPV True H1975_Epitope_Rep3 1261.71427004121 1261.7131699358602 35.186 2 -0.5612872443464848 0.16108054027013508 1.0 ['ENST00000502875.1_1_4:141563950-141565549:-|nuORF'] 11319 8145 DEVQILEMPSK True NCI_RA007_Epitope_Rep2 1287.6380534361099 1287.63694993586 36.317 2 -0.5613889277518355 0.16112635146038407 1.0 ['ENST00000460402.5_1_22:19776234-19842274:-|nuORF', 'nc|ENSG00000185838|Q9BYB4-2|GNB1L', 'ENSG00000185838|ENST00000329517|GNB1L'] 101075 8589 SLTSPTHV True PC9_epitope_Rep4 840.4341320264801 840.43302993586 40.518 2 -0.561480377580298 0.16118569676628156 1.0 ['nc|ENSG00000167757|Q9UBX7-4|KLK11', 'nc|ENSG00000167757|Q9UBX7-3|KLK11'] 40525 10530 HSNRIYRMI True PC9_epitope_Rep6 1188.61859583456 1188.61693490379 51.294 3 -0.5614965558264511 0.16118569676628156 1.0 ['ENSG00000096384|ENST00000371646|HSP90AB1'] 79508 11771 PGQLKILTG True PC9_epitope_Rep2 925.55966689277 925.55856993586 50.609 2 -0.5615995925806511 0.16120496313148425 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 87493 17712 QTGIQDFLTLT True PC9_epitope_Rep1 1235.6397676882698 1235.6386699358602 72.924 2 -0.5616067436866505 0.16120496313148425 1.0 ['ENSG00000168758|ENST00000305476|SEMA4C'] 65748 16004 LSIEEGKSGVL True PC9_epitope_Rep5 1130.6183039676998 1130.61720993586 66.55 2 -0.5616072539694693 0.16120496313148425 1.0 ['nc|ENSG00000112769|Q16363-2|LAMA4', 'nc|ENSG00000112769|Q16363|LAMA4', 'ENSG00000112769|ENST00000230538|LAMA4', 'LAMA4|p.P1437Hfs*28|1|0.1|ENSG00000112769|chr6:112122179-112122180|-/T|frameshift_variant', 'LAMA4|p.A683Qfs*20|1|0.24|ENSG00000112769|chr6:112154860-112154860|C/-|frameshift_variant'] 37343 16931 GVWEELGV True PC9_epitope_Rep1 887.4388830537498 887.43778993586 69.948 2 -0.5616339137973115 0.16120496313148425 1.0 ['ENSG00000101004|ENST00000278886|NINL', 'nc|ENSG00000101004|Q9Y2I6-2|NINL'] 108072 7339 TDLCWTFSP True H1975_Epitope_Rep2 1068.45863252216 1068.45752993586 33.17 2 -0.5616349435965677 0.16120496313148425 1.0 ['ENST00000491475.1_1_10:123324010-123325402:-|nuORF'] 67846 14693 LTIVNSSVL True PC9_epitope_Rep5 944.55424715916 944.55314993586 61.52 2 -0.5617874854460384 0.1612778315585673 1.0 ['SORL1|p.M2063Vfs*2|1|0.15|ENSG00000137642|chr11:121625100-121625101|AT/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1'] 16306 11745 EEIRKLAE True PC9_epitope_Rep5 986.5396597241798 986.53856993586 50.177 2 -0.5617894043709526 0.1612778315585673 1.0 ['ENSG00000089154|ENST00000300648|GCN1', 'ENST00000548132.1_1_12:120592933-120593466:-|nuORF'] 62538 9686 LLTEIRNEKF True PC9_epitope_Rep2 1261.7030366511697 1261.70140490379 42.597 3 -0.5618207653694288 0.1612778315585673 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 9479 4596 AVYFHKYVYT True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 22.706 3 -0.5619472993265918 0.16136942983446806 1.0 ['ENST00000451442.5_3_20:24943568-24943694:-|nuORF'] 46759 9488 IVAYHGSYLW True NCI_RA007_Epitope_Rep2 1207.60259433391 1207.6014899358602 41.519 2 -0.5619953581265102 0.16136942983446806 1.0 ['ENST00000588083.5_1_19:39104803-39108481:-|nuORF', 'ENST00000587300.1_1_19:39106832-39108535:-|nuORF', 'ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1'] 111318 17990 TLHSVTPAVL True PC9_epitope_Rep5 1036.59169529704 1036.5905899358602 74.215 2 -0.5620354662288563 0.16143136021167095 1.0 ['ENSG00000081148|ENST00000193391|IMPG2'] 84440 14506 QGIYGVPHSTL True PC9_epitope_Rep1 1170.6033226098998 1170.6022299358601 60.622 2 -0.5621138595437455 0.16149068322981366 1.0 ['nc|ENSG00000178177|Q8N3X6|LCORL', 'nc|ENSG00000178177|Q8N3X6-2|LCORL'] 90085 3466 RGQEGRPGAP True NCI_RA007_Epitope_Rep2 1023.5209899682698 1023.5198899358601 18.14 2 -0.5621482960683675 0.16149068322981366 1.0 ['ENSG00000215018|ENST00000399429|COL28A1', 'nc|ENSG00000215018|Q2UY09-2|COL28A1', 'COL28A1|p.V898Sfs*7|1|0.36|ENSG00000215018|chr7:7373215-7373216|-/C|frameshift_variant', 'COL28A1|p.F945Sfs*5|1|0.19|ENSG00000215018|chr7:7373056-7373072|ATTCATTTCTTTGTGGA/-|frameshift_variant'] 35180 7725 GSDFDC[Carbamidomethyl]ELR True NCI_RA007_Epitope_Rep2 1097.4447736425998 1097.44366993586 34.676 2 -0.5621902323099954 0.1615021050763796 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 137827 11508 YPFPRTVNDYT True H1975_Epitope_Rep3 1371.64591569787 1371.6448099358602 49.39 2 -0.5622434811448271 0.1615021050763796 1.0 ['ENST00000551454.1_1_10:94449743-94451337:+|nuORF', 'ENSG00000152804|ENST00000282728|HHEX'] 46611 8795 ITTAATEI True PC9_epitope_Rep3 818.43854870058 818.43744993586 38.78 2 -0.5622535437557918 0.1615021050763796 1.0 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 58081 11395 LERRELDP True PC9_epitope_Rep3 1026.5458077337798 1026.54470993586 48.834 2 -0.5622592748602661 0.1615021050763796 1.0 ['ENSG00000145103|ENST00000344209|ILDR1', 'nc|ENSG00000145103|Q86SU0-2|ILDR1', 'nc|ENSG00000145103|Q86SU0-6|ILDR1', 'nc|ENSG00000145103|Q86SU0-5|ILDR1'] 108608 9961 TEINEVEVDP True H1975_Epitope_Rep2 1143.52954853295 1143.5284499358602 43.306 2 -0.5623562312521461 0.1615021050763796 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF', 'COL14A1|p.W717*|1|0.21|ENSG00000187955|chr8:120228722-120228722|G/-|frameshift_variant', 'ENST00000498051.6_1_8:121226287-121243878:+|nuORF'] 18438 10840 EKGYWSFFMYV True H1975_Epitope_Rep2 1455.65330957743 1455.6522099358601 46.724 2 -0.562367643574926 0.1615021050763796 1.0 ['ENST00000290858.10_1_16:67133564-67133669:+|nuORF'] 48410 4977 KEDLQDVFRK True NCI_RA007_Epitope_Rep5 1276.6775501793197 1276.67590490379 25.848 3 -0.5624043985617807 0.1615021050763796 1.0 ['POLQ|p.N2068D|1|0.34|ENSG00000051341|chr3:121481581-121481581|T/C|missense_variant'] 52297 6843 KPAKPLISV True PC9_epitope_Rep2 951.61170246563 951.61060993586 31.727 2 -0.5624462820956007 0.1615021050763796 1.0 ['ENSG00000197056|ENST00000359858|ZMYM1', 'ZMYM1|p.T506Pfs*15|1|0.15|ENSG00000197056|chr1:35113340-35113340|A/-|frameshift_variant'] 42972 8174 IGAIAAGNAVI True PC9_epitope_Rep2 968.5654805492 968.56438993586 36.797 2 -0.5625047020741717 0.16151563054489143 1.0 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 25272 4242 FEDPQRREVA True H1975_Epitope_Rep3 1245.6101988954902 1245.60856490379 21.434 3 -0.5626042099785279 0.16157494031873024 1.0 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 127743 25732 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 108.93 2 -0.5626139795377613 0.16157494031873024 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 100158 10889 SLLEISTVE True PC9_epitope_Rep4 989.52809198097 989.52698993586 49.651 2 -0.5626534397095095 0.16158846395793344 1.0 ['ENSG00000111241|ENST00000228837|FGF6'] 84439 10419 QGIVGDFD True H1975_Epitope_Rep3 849.38684748089 849.3862949679301 45.135 1 -0.562686577821091 0.16159938063517154 1.0 ['nc|ENSG00000196335|Q9BXU1-3|STK31', 'nc|ENSG00000196335|Q9BXU1-2|STK31', 'ENSG00000196335|ENST00000355870|STK31'] 13986 24606 DRRQRPAAEW True PC9_epitope_Rep3 1283.6483157397097 1283.64667490379 100.01 3 -0.5626933366985496 0.16159938063517154 1.0 ['ENST00000575120.5_1_16:4526457-4556918:+|nuORF'] 37043 18006 GVSDVDYSL True PC9_epitope_Rep3 953.43419159613 953.43308993586 74.464 2 -0.562744886606355 0.16161290322580646 1.0 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 87711 10611 QVEEARLKEAQ True NCI_RA007_Epitope_Rep1 1299.67827845531 1299.67718993586 45.263 2 -0.5627755541414863 0.1616399470984807 1.0 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 55947 14961 LDHPNLAEY True PC9_epitope_Rep5 1070.50327421546 1070.5021699358601 62.549 2 -0.5627845479463585 0.1616399470984807 1.0 ['nc|ENSG00000167740|Q8WUJ1-3|CYB5D2', 'ENSG00000167740|ENST00000301391|CYB5D2'] 111651 12471 TLPAGFCEL True PC9_epitope_Rep2 949.45790424617 949.45680993586 53.28 2 -0.5628813646212457 0.16165086123475905 1.0 ['ENSG00000147324|ENST00000276282|MFHAS1'] 70234 14372 LYMEANRQVP True PC9_epitope_Rep2 1219.60194271091 1219.6003049037902 60.543 3 -0.5629064128188246 0.16165086123475905 1.0 ['ENSG00000070785|ENST00000360403|EIF2B3', 'nc|ENSG00000070785|Q9NR50-3|EIF2B3', 'nc|ENSG00000070785|Q9NR50-2|EIF2B3'] 23133 22286 EVMRLLQAANP True PC9_epitope_Rep1 1240.6597919401997 1240.6586899358601 90.534 2 -0.5631199191397089 0.16174502056285783 1.0 ['ENSG00000166707|ENST00000650639|ZCCHC18'] 499 7495 AAPAPSTVT True PC9_epitope_Rep2 813.42323298961 813.42212993586 34.2 2 -0.5631830463687146 0.1617746669677128 1.0 ['ENSG00000166188|ENST00000299237|ZNF319'] 96521 10878 SELLCYFIII True H1975_Epitope_Rep1 1212.6464332918401 1212.6453299358602 46.802 2 -0.5632107791794931 0.1617751402954267 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 17984 9272 EIGPSRFRAP True PC9_epitope_Rep1 1128.60399131624 1128.60288993586 40.517 2 -0.5632138317758434 0.1617751402954267 1.0 ['ENSG00000138107|ENST00000369905|ACTR1A'] 40707 4768 HTQREKIT True PC9_epitope_Rep3 1011.5461420869499 1011.54504993586 23.432 2 -0.5632191273411438 0.1617751402954267 1.0 ['ENST00000467502.6_1_19:46886456-46890886:+|nuORF'] 17107 8295 EGSESEEEAPA True PC9_epitope_Rep3 1133.43604207093 1133.43494993586 36.88 2 -0.5632260226803475 0.1617751402954267 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-5|TCOF1', 'ENST00000515035.5_1_5:149748314-149754605:+|nuORF'] 17372 11637 EHEGITILVRR True NCI_RA007_Epitope_Rep2 1321.74663279865 1321.74552993586 49.858 2 -0.5633284542059543 0.1617751402954267 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 117979 10973 VASEDLFPFPI True H1975_Epitope_Rep3 1233.6281403754099 1233.6270499358602 47.296 2 -0.563349289411051 0.1617751402954267 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2'] 74349 6444 NIQTVKRLRT True NCI_RA007_Epitope_Rep1 1227.7411534953899 1227.73951490379 29.086 3 -0.5633956367452809 0.1618047828681083 1.0 107918 9370 TAVQHGLEGL True PC9_epitope_Rep4 1023.5349086969098 1023.53380993586 43.65 2 -0.5636554238395336 0.16195037004788854 1.0 ['ENSG00000119917|ENST00000371818|IFIT3'] 101531 6639 SPALMVEDL True PC9_epitope_Rep1 973.47903361357 973.47792993586 30.342 2 -0.5637479691307282 0.16195037004788854 1.0 ['PXDNL|p.W1197S|1|0.64|ENSG00000147485|chr8:51374699-51374699|C/G|missense_variant'] 65343 8085 LSELSYAP True PC9_epitope_Rep1 878.4385487005799 878.43744993586 35.923 2 -0.563749199826521 0.16195037004788854 1.0 ['PDPR|p.D633H|1|0.3|ENSG00000090857|chr16:70146163-70146163|G/C|missense_variant', 'ENST00000566802.5_1_16:74366359-74378726:-|nuORF', 'ENSG00000090857|ENST00000288050|PDPR'] 13109 2737 DLSHIPLKDP True H1975_Epitope_Rep3 1133.60807363717 1133.6069699358602 14.615 2 -0.5637531823882483 0.16195037004788854 1.0 ['ENSG00000111647|ENST00000279907|BLTP3B'] 63271 8253 LPAPADQTQP True H1975_Epitope_Rep3 1036.5189242796 1036.5178299358602 36.73 2 -0.5637538685943245 0.16195037004788854 1.0 ['nc|ENSG00000188158|Q6T4R5-2|NHS', 'ENSG00000188158|ENST00000676302|NHS', 'NHS|p.L256Ffs*28|1|0.61|ENSG00000188158|chrX:17692377-17692377|C/-|frameshift_variant'] 77935 5680 PAISTNKT True PC9_epitope_Rep1 830.44978209062 830.44868993586 26.671 2 -0.5637811759757655 0.16195037004788854 1.0 ['ENST00000557743.2_1_14:89756667-89757087:-|nuORF'] 21427 4393 ERNTVCKRCP True H1975_Epitope_Rep2 1204.5804960736798 1204.57885490379 22.008 3 -0.5638063575704023 0.16197739475338999 1.0 ['ENSG00000164761|ENST00000297350|TNFRSF11B'] 121166 15890 VGGIQNLI True PC9_epitope_Rep4 812.4756029156399 812.4745099358599 69.051 2 -0.5638385026833073 0.16197739475338999 1.0 ['nc|ENSG00000165887|Q9GZV1-2|ANKRD2', 'ENSG00000165887|ENST00000370655|ANKRD2', 'nc|ENSG00000165887|Q9GZV1|ANKRD2'] 22378 7772 ETERKMYSLRE True H1975_Epitope_Rep3 1440.7031133041598 1440.70147490379 34.88 3 -0.5638912783572354 0.16205278686938715 1.0 ['ENSG00000164256|ENST00000296682|PRDM9', 'PRDM9|p.D324Mfs*84|1|0.28|ENSG00000164256|chr5:23524351-23524351|G/-|frameshift_variant', 'PRDM9|p.M378Ifs*71|2|0.25|ENSG00000164256|chr5:23524515-23524516|-/T|frameshift_variant', 'PRDM9|p.D434Ifs*30|1|0.27|ENSG00000164256|chr5:23526385-23526385|G/-|frameshift_variant'] 61805 12729 LLKQGQVEL True NCI_RA007_Epitope_Rep3 1026.6073453611798 1026.6062499358602 57.304 2 -0.5639198947875425 0.16205278686938715 1.0 ['nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'ENSG00000197748|ENST00000357060|CFAP43'] 68525 6367 LTVTGAVPVA True H1975_Epitope_Rep3 926.54368247546 926.54258993586 29.474 2 -0.5639853064348289 0.16208241970849993 1.0 ['ENSG00000197110|ENST00000413851|IFNL3', 'ENSG00000183709|ENST00000331982|IFNL2'] 60468 17868 LILNDNLIP True H1975_Epitope_Rep1 1023.59644632431 1023.5953499358601 74.418 2 -0.5640399563319446 0.16211205159209996 1.0 ['ENSG00000121871|ENST00000475390|SLITRK3', 'SLITRK3|p.V747Gfs*14|1|0.2|ENSG00000121871|chr3:165188591-165188592|-/C|frameshift_variant'] 7803 12406 ASYYKYWEKKI True NCI_RA007_Epitope_Rep5 1477.7605515272896 1477.7594499358602 54.376 2 -0.564059644247886 0.16212556024892788 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.S2410Lfs*12|1|0.26|ENSG00000197653|chr12:123867998-123867998|C/-|frameshift_variant', 'nc|ENSG00000197653|Q8IVF4-2|DNAH10', 'ENST00000467219.5_1_12:124265674-124298205:+|nuORF'] 104474 11953 SSLVPEDSPHV True NCI_RA007_Epitope_Rep5 1165.56151736757 1165.5604299358602 52.633 2 -0.564096018537056 0.16214996211449484 1.0 ['ENSG00000197077|ENST00000358431|KIAA1671'] 114433 6633 TSDWYMNGNY True H1975_Epitope_Rep2 1249.47098811101 1249.46988993586 30.422 2 -0.564123549517367 0.16214996211449484 1.0 ['ENSG00000188338|ENST00000614032|SLC38A3'] 138640 21547 YRRNFNYRRRR True NCI_RA007_Epitope_Rep1 1655.8981566856698 1655.8970499358602 88.159 2 -0.5641246469766165 0.16214996211449484 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 17145 8854 EGVVEC[Carbamidomethyl]SFVK True NCI_RA007_Epitope_Rep1 1152.5485104351499 1152.54740993586 38.44 2 -0.5642150008418526 0.16216346928905367 1.0 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 59543 9733 LGQRVQCSP True H1975_Epitope_Rep3 986.4967493663798 986.49564993586 42.459 2 -0.5643109246370293 0.16219309699988715 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 23444 12496 EVWHYECIP True PC9_epitope_Rep1 1174.51173072418 1174.5106299358602 52.934 2 -0.56440546677519 0.1622388444673717 1.0 ['ENSG00000178409|ENST00000369042|BEND3'] 91185 24949 RLQCALAA True PC9_epitope_Rep4 844.4589073056799 844.4583549679301 104.5 1 -0.5644443143545647 0.16224711856210203 1.0 ['ENSG00000157005|ENST00000287641|SST'] 133549 5773 WHREKRRQRNK True H1975_Epitope_Rep1 1592.8872576487995 1592.88562490379 27.276 3 -0.5644969407046041 0.16224711856210203 1.0 ['ENSG00000153993|ENST00000284136|SEMA3D'] 63417 9239 LPGKSLTY True PC9_epitope_Rep2 877.49091862661 877.48982993586 40.877 2 -0.5644989221795184 0.16224711856210203 1.0 ['ENST00000374232.7_1_9:115631560-115631692:+|nuORF'] 65445 9504 LSEYQDVNK True NCI_RA007_Epitope_Rep2 1094.5244035828598 1094.5233099358602 41.583 2 -0.5645689136754299 0.16227151100938134 1.0 ['nc|ENSG00000006740|Q17R89-2|ARHGAP44', 'nc|ENSG00000006740|Q17R89-3|ARHGAP44', 'ENSG00000006740|ENST00000379672|ARHGAP44', 'ENST00000538915.2_1_17:12853006-12862275:+|nuORF'] 79480 11165 PGPSASSLL True PC9_epitope_Rep2 827.43888305375 827.43778993586 48.271 2 -0.564588720533715 0.16227151100938134 1.0 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 35116 7324 GRRWRRRRRRL True NCI_RA007_Epitope_Rep4 1623.0042935200597 1623.0026549037898 34.81 3 -0.5645896896935567 0.16227151100938134 1.0 ['ENST00000492275.5_1_21:38445580-38480706:+|nuORF', 'ENST00000355666.5_1_21:38445580-38459609:+|nuORF'] 69096 16945 LVKKKKKKKKG True PC9_epitope_Rep6 1311.9442104063899 1311.94310993586 77.724 2 -0.564774635215746 0.16229590109766123 1.0 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 56689 13126 LEAEFVRRE True PC9_epitope_Rep3 1147.5985715826298 1147.59746993586 55.512 2 -0.5648304187102149 0.16229590109766123 1.0 ['ENST00000590278.1_1_19:33696051-33698478:+|nuORF', 'ENSG00000130881|ENST00000253193|LRP3'] 26801 5557 FLDWRKMK True PC9_epitope_Rep5 1122.6008205121 1122.59917490379 26.381 3 -0.564835034618305 0.16229590109766123 1.0 ['nc|ENSG00000148848|O43184-3|ADAM12', 'nc|ENSG00000148848|O43184-4|ADAM12', 'nc|ENSG00000148848|O43184-2|ADAM12', 'ENSG00000148848|ENST00000448723|ADAM12', 'nc|ENSG00000148848|O43184|ADAM12'] 110680 22485 TIYDILFT True PC9_epitope_Rep3 984.51679902128 984.51570993586 91.763 2 -0.5649103126229678 0.16233902293570587 1.0 ['ENST00000520678.1_1_8:43037358-43049067:+|nuORF'] 135668 12299 YEGKFQIQS True H1975_Epitope_Rep3 1098.53457434374 1098.53346993586 52.489 2 -0.5649170727238979 0.16233902293570587 1.0 ['ENST00000395834.5_1_14:50796549-50796777:-|nuORF'] 37706 6321 HAPDSVVP True PC9_epitope_Rep1 820.4079172786401 820.40682993586 29.126 2 -0.5649618015003727 0.16237952486864585 1.0 ['ENST00000314686.9_1_3:40519448-40523394:+|nuORF', 'nc|ENSG00000177873|Q8N2I2-2|ZNF619'] 42917 10660 IFVWIQYEGRW True H1975_Epitope_Rep1 1495.76122023363 1495.76012993586 45.96 2 -0.5649627012851914 0.16237952486864585 1.0 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 63028 19541 LNIKSPFSL True PC9_epitope_Rep5 1017.58588164061 1017.58478993586 80.217 2 -0.5649755561900924 0.16237952486864585 1.0 ['ENSG00000111713|ENST00000261195|GYS2'] 15328 7303 EAKVEVEDVDE True H1975_Epitope_Rep2 1260.5721416209196 1260.57049490379 33.029 3 -0.5649816770896149 0.1623904074265085 1.0 ['ENST00000502875.1_1_4:141563950-141565549:-|nuORF'] 137667 21364 YLYYFKSP True PC9_epitope_Rep1 1079.5327834385898 1079.5316899358602 87.008 2 -0.5649862191279581 0.1623904074265085 1.0 ['ENSG00000167202|ENST00000300584|TBC1D2B', 'nc|ENSG00000167202|Q9UPU7-2|TBC1D2B'] 86296 13219 QQEWEKNLREN True PC9_epitope_Rep5 1472.70080480504 1472.69970993586 55.854 2 -0.5650752499319666 0.16241781616604356 1.0 ['ENSG00000204315|ENST00000375156|FKBPL'] 80676 5220 PLPSRPLTP True NCI_RA007_Epitope_Rep5 976.5705659296399 976.56946993586 26.774 2 -0.5650971551665113 0.16241781616604356 1.0 ['ENSG00000182791|ENST00000333861|CCDC87'] 78658 13247 PEAILNLQAL True PC9_epitope_Rep4 1080.61791004488 1080.6168099358601 58.854 2 -0.5651681366042137 0.16241781616604356 1.0 ['nc|ENSG00000186001|Q96II8-3|LRCH3', 'nc|ENSG00000186001|Q96II8-4|LRCH3', 'ENSG00000186001|ENST00000425562|LRCH3', 'nc|ENSG00000186001|Q96II8-2|LRCH3'] 79510 11172 PGQLKILTG True PC9_epitope_Rep4 925.55966689277 925.55856993586 50.751 2 -0.5651956371850294 0.16241781616604356 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 44844 20170 IPYFIWTT True H1975_Epitope_Rep3 1039.5378688190299 1039.53676993586 84.373 2 -0.5652246337531988 0.16241781616604356 1.0 ['ENSG00000214021|ENST00000685419|TTLL3', 'ENST00000496526.5_1_3:9854990-9859595:+|nuORF'] 86669 7785 QRGVESRVSL True PC9_epitope_Rep1 1129.62036965637 1129.61872490379 34.768 3 -0.5652377469457971 0.16241781616604356 1.0 ['MTHFD2L|p.W74R|1|0.69|ENSG00000163738|chr4:74174582-74174582|T/A|missense_variant'] 116419 8751 TWPFWSRHFVP True NCI_RA007_Epitope_Rep2 1458.7196897748202 1458.7180349037899 38.685 3 -0.5652495544139717 0.16241781616604356 1.0 ['ENST00000456170.5_1_1:44686783-44687191:-|nuORF'] 122680 7485 VGTRYKCSVCP True NCI_RA007_Epitope_Rep2 1211.57909909135 1211.57800993586 33.744 2 -0.5652512183199353 0.16241781616604356 1.0 ['ENSG00000161011|ENST00000389805|SQSTM1', 'nc|ENSG00000161011|Q13501-2|SQSTM1', 'ENST00000466342.1_1_5:179250916-179260288:+|nuORF'] 85223 7405 QKKKKKKKK True NCI_RA007_Epitope_Rep1 1170.8288463009796 1170.82720490379 32.8 3 -0.5653137679325116 0.1624448096941571 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 57378 13252 LEHLKPTYWFS True H1975_Epitope_Rep3 1419.7186867153098 1419.7175899358601 56.23 2 -0.5653162734069527 0.1624448096941571 1.0 ['ENSG00000138231|ENST00000260803|DBR1'] 19243 21080 ELLEFKFKYP True PC9_epitope_Rep2 1312.7067250492798 1312.70562993586 86.541 2 -0.565332149365477 0.16247180148243634 1.0 ['ENSG00000138356|ENST00000374700|AOX1'] 30692 6735 GALPYQGIA True NCI_RA007_Epitope_Rep3 888.4705175351999 888.46942993586 33.582 2 -0.5653444451270954 0.16247180148243634 1.0 ['IGBP1|p.D282Y|2|0.1|ENSG00000089289|chrX:70150295-70150295|G/T|missense_variant'] 46787 11639 IVDFAKQLP True PC9_epitope_Rep3 1029.5858816406098 1029.58478993586 49.784 2 -0.5653709943402211 0.16250140990315978 1.0 ['nc|ENSG00000025434|Q13133-3|NR1H3', 'ENSG00000025434|ENST00000441012|NR1H3'] 31422 6564 GEDIVITAHV True NCI_RA007_Epitope_Rep2 1052.55022440788 1052.54912993586 30.144 2 -0.5654055316708249 0.16251228590303401 1.0 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 45700 8500 ISLIRQRF True NCI_RA007_Epitope_Rep5 1031.6239984848298 1031.6229099358602 39.379 2 -0.5654058668629696 0.16251228590303401 1.0 ['ENSG00000121058|ENST00000240316|COIL', 'COIL|p.S516Yfs*6|1|0.1|ENSG00000121058|chr17:56946453-56946453|G/-|frameshift_variant', 'COIL|p.N162Tfs*47|1|0.33|ENSG00000121058|chr17:56950757-56950757|T/-|frameshift_variant'] 66043 17225 LSNDLKLNL True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 71.517 2 -0.5654576830260506 0.1625179241787101 1.0 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16'] 128091 24977 VRRPHVVG True NCI_RA007_Epitope_Rep5 918.5511678977399 918.5506149679301 103.57 1 -0.565465612955923 0.1625179241787101 1.0 ['nc|ENSG00000072518|Q7KZI7-15|MARK2'] 45273 15285 ISAADKAEEF True NCI_RA007_Epitope_Rep4 1079.51350454599 1079.5124099358602 66.445 2 -0.5654666657704828 0.1625179241787101 1.0 ['nc|ENSG00000108039|Q9NQW7-2|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7-4|XPNPEP1', 'ENSG00000108039|ENST00000502935|XPNPEP1', 'ENST00000513817.5_1_10:111637546-111643934:-|nuORF', 'ENST00000472336.5_1_10:111635284-111643934:-|nuORF', 'ENST00000488118.6_1_10:111637546-111648351:-|nuORF'] 140185 13136 YVVDDAAVL True NCI_RA007_Epitope_Rep4 963.4913125494298 963.4907649679301 57.626 1 -0.5654873608086186 0.1625179241787101 1.0 ['ENSG00000198841|ENST00000371614|KTI12'] 80899 6085 PLYMCGLLPAK True NCI_RA007_Epitope_Rep5 1204.63482306232 1204.63318490379 30.087 3 -0.5655130260190685 0.16252618011922024 1.0 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 82085 8926 PSYLLTCR True PC9_epitope_Rep5 951.48478770035 951.48368993586 39.279 2 -0.565530520652044 0.16252618011922024 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 123672 7685 VINLSSHIE True PC9_epitope_Rep5 1010.5396597241801 1010.53856993586 34.505 2 -0.5655389174305949 0.16252618011922024 1.0 ['ANKRD26|p.R1462S|1|0.48|ENSG00000107890|chr10:27017622-27017622|T/A|missense_variant'] 79018 8231 PFNHTTTVNTI True NCI_RA007_Epitope_Rep1 1243.61970095003 1243.6186099358601 36.015 2 -0.5656030081862863 0.1625988755175358 1.0 ['ENSG00000148948|ENST00000528697|LRRC4C'] 80849 15227 PLVDALVVP True H1975_Epitope_Rep2 921.55351888317 921.55297496793 63.728 1 -0.5656350956367057 0.1625988755175358 1.0 ['ENSG00000167720|ENST00000344595|SRR'] 66973 10775 LTAAAQPLKAK True NCI_RA007_Epitope_Rep1 1110.6760936273397 1110.6749899358601 45.907 2 -0.5656417958013534 0.1625988755175358 1.0 ['nc|ENSG00000149476|Q3LXA3-2|TKFC', 'ENSG00000149476|ENST00000394900|TKFC', 'ENST00000530329.1_1_11:61112942-61113484:+|nuORF', 'ENST00000525366.5_1_11:61112846-61113972:+|nuORF'] 133309 10296 WEQNLKDP True H1975_Epitope_Rep2 1028.4927095317598 1028.4916099358602 44.609 2 -0.565663784698994 0.16262323603324957 1.0 ['nc|ENSG00000028116|Q86Y07-4|VRK2', 'nc|ENSG00000028116|Q86Y07-5|VRK2', 'nc|ENSG00000028116|Q86Y07-2|VRK2', 'nc|ENSG00000028116|Q86Y07-3|VRK2', 'ENSG00000028116|ENST00000340157|VRK2'] 108645 9317 TEKVEKMFP True H1975_Epitope_Rep1 1107.5634319438698 1107.5623299358601 40.744 2 -0.5657042746869021 0.16262323603324957 1.0 ['ENST00000479518.1_1_13:96236855-96239862:-|nuORF', 'ENST00000485031.5_1_13:96234490-96239991:-|nuORF', 'nc|ENSG00000134874|Q86YF9-2|DZIP1', 'DZIP1|p.G831Afs*21|1|0.35|ENSG00000134874|chr13:95584768-95584768|C/-|frameshift_variant', 'ENSG00000134874|ENST00000376829|DZIP1'] 32286 21586 GFSKRKLRQ True PC9_epitope_Rep6 1118.6672602791398 1118.6661699358601 95.907 2 -0.5657300633261614 0.16262323603324957 1.0 ['ENSG00000047648|ENST00000337414|ARHGAP6', 'ARHGAP6|p.R433Efs*9|1|0.38|ENSG00000047648|chrX:11182095-11182095|G/-|frameshift_variant', 'nc|ENSG00000047648|O43182-3|ARHGAP6', 'nc|ENSG00000047648|O43182-2|ARHGAP6', 'ENST00000489330.6_1_X:11166772-11683098:-|nuORF'] 69674 7990 LVWFQWSWNP True H1975_Epitope_Rep3 1361.6556925359298 1361.65458993586 35.704 2 -0.5657447193154035 0.1626236268161464 1.0 ['YLPM1|p.G95Afs*124|1|0.21|ENSG00000119596|chr14:74763768-74763768|G/-|frameshift_variant'] 10191 9049 CCTTGCGR True PC9_epitope_Rep1 799.27751443939 799.27640993586 39.658 2 -0.5657638438553138 0.1626236268161464 1.0 ['ENSG00000124116|ENST00000243938|WFDC3'] 130869 18777 VVGRKVWR True PC9_epitope_Rep3 998.6137681542999 998.61266993586 77.445 2 -0.5657892680495725 0.1626236268161464 1.0 ['ENST00000551108.1_1_12:29542438-29639896:+|nuORF'] 85228 4407 QKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 21.778 3 -0.5658380706074466 0.1626236268161464 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 13380 4503 DNGHCIHERWK True NCI_RA007_Epitope_Rep2 1393.6309514234101 1393.6293149037901 22.146 3 -0.5658425004741989 0.1626236268161464 1.0 ['nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENST00000496580.1_1_1:53755152-53793476:-|nuORF'] 101067 19285 SLTQPALQVP True PC9_epitope_Rep2 1052.5866099165999 1052.58550993586 79.554 2 -0.5659105734358304 0.1626236268161464 1.0 ['ENST00000306353.7_2_2:85825849-85826182:-|nuORF'] 12036 8109 DIDITQKYV True NCI_RA007_Epitope_Rep2 1093.56554011885 1093.56444993586 36.176 2 -0.5659289663042087 0.16263711483014673 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36573967-36592308:+|nuORF'] 54755 14553 LAEQLPFHPP True PC9_epitope_Rep1 1147.6025943339098 1147.6014899358602 60.802 2 -0.5659580905429806 0.16265060240963855 1.0 ['ENST00000567024.1_1_16:28847785-28848095:+|nuORF'] 57440 5750 LEIPDPDK True NCI_RA007_Epitope_Rep2 925.47566248529 925.47456993586 26.983 2 -0.5659850413620058 0.1626963034549408 1.0 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 41414 19560 IASKEQDF True PC9_epitope_Rep5 936.4552613938798 936.45416993586 80.287 2 -0.5660524974134943 0.1627097896466192 1.0 ['ENST00000463912.5_1_7:139083347-139097327:+|nuORF', 'nc|ENSG00000269955|Q9Y383-3|LUC7L2', 'nc|ENSG00000269955|Q9Y383-2|LUC7L2', 'ENSG00000146963|ENST00000354926|LUC7L2', 'nc|ENSG00000164898|Q96HJ9-2|FMC1'] 129389 8800 VTEGQIPETG True H1975_Epitope_Rep2 1029.4978544818498 1029.4967499358602 38.815 2 -0.5660690659715675 0.1627206545548254 1.0 ['nc|ENSG00000181781|Q3SX64-2|CIMAP1D', 'ENSG00000181781|ENST00000315489|ODF3L2'] 75698 18726 NQVALPNI True PC9_epitope_Rep5 867.48141657207 867.4808649679301 77.046 1 -0.5660959182999219 0.1627206545548254 1.0 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 101337 11644 SLYSGLSTPP True H1975_Epitope_Rep2 1020.51277627 1020.51166993586 49.858 2 -0.566123902724874 0.16273151876308584 1.0 ['nc|ENSG00000113916|P41182-2|BCL6', 'ENSG00000113916|ENST00000406870|BCL6'] 18188 12021 EIQNQTLP True PC9_epitope_Rep5 941.4818104948899 941.48070993586 51.234 2 -0.5661375352645898 0.16273151876308584 1.0 ['MTRR|p.G134Wfs*6|2|0.55|ENSG00000124275|chr5:7875291-7875292|-/T|frameshift_variant', 'ENSG00000124275|ENST00000440940|MTRR', 'nc|ENSG00000124275|Q9UBK8-1|MTRR', 'MTRR-NMD3|1|fusion', 'MTRR-NMD3|2|fusion'] 23041 4854 EVKNDTSP True NCI_RA007_Epitope_Rep3 888.41887588516 888.41776993586 26.078 2 -0.5661822764888198 0.1627450033016057 1.0 ['ENST00000295491.8_1_4:84382410-84382509:+|nuORF'] 20001 7486 EMIHRFWYNYR True H1975_Epitope_Rep1 1613.7561519365297 1613.75449490379 33.791 3 -0.5662267482336797 0.16275848740578497 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 134720 5009 WWRWPRCYWAP True NCI_RA007_Epitope_Rep2 1605.74519333001 1605.74353490379 24.107 3 -0.5662805300287659 0.16280418082553588 1.0 ['ENST00000341500.9_1_19:7267817-7293934:-|nuORF'] 16615 5614 EERVWEYPEGV True H1975_Epitope_Rep1 1391.6357449369898 1391.6346499358601 26.661 2 -0.5662839720536266 0.16281504146871728 1.0 ['ENSG00000104142|ENST00000220509|VPS18'] 69676 9998 LVWGPHKRRE True NCI_RA007_Epitope_Rep1 1276.7152731007202 1276.7141699358601 42.896 2 -0.5663042457798151 0.16281504146871728 1.0 ['ENST00000438568.6_1_1:150479567-150479729:+|nuORF'] 129501 22896 VTFALNWM True PC9_epitope_Rep4 980.47897404392 980.47786993586 96.289 2 -0.5664097673903788 0.16282852357639785 1.0 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'ENST00000502426.5_1_17:48755439-48768558:+|nuORF'] 12973 7903 DLPLSQDPAP True NCI_RA007_Epitope_Rep1 1051.51858992643 1051.51748993586 34.734 2 -0.5666223760502307 0.16291203040208693 1.0 ['ENST00000572418.1_1_17:3806502-3807261:-|nuORF'] 138646 27710 YRRQLRWKMLQ True PC9_epitope_Rep3 1576.8772701287196 1576.8761699358602 114.59 2 -0.5666329530325168 0.16291203040208693 1.0 ['ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1', 'nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1'] 44155 19960 ILPSQPGLV True PC9_epitope_Rep5 922.5487678558999 922.54766993586 81.83 2 -0.5666554762863375 0.16291203040208693 1.0 ['nc|ENSG00000116133|Q15392-2|DHCR24', 'ENSG00000116133|ENST00000371269|DHCR24'] 108113 5358 TDLVIDSRP True H1975_Epitope_Rep3 1014.5345743437399 1014.53346993586 25.674 2 -0.5666881116504107 0.16291203040208693 1.0 ['ENSG00000232434|ENST00000436881|AJM1'] 7307 24322 ARRLWLLWALW True PC9_epitope_Rep4 1482.86120905842 1482.86010993586 102.04 2 -0.5666896911060169 0.16291203040208693 1.0 ['ENST00000216264.12_1_22:47081202-47081484:-|nuORF'] 65784 15258 LSIRPVGTI True PC9_epitope_Rep4 954.5862159937799 954.58510993586 66.621 2 -0.5668169412321978 0.16296069686186743 1.0 ['ENST00000515837.6_1_11:61165820-61165925:+|nuORF'] 46095 9398 ISYWRNEFDWK True NCI_RA007_Epitope_Rep1 1542.7255630008997 1542.72391490379 40.548 3 -0.5668190972353975 0.16296069686186743 1.0 ['ENSG00000143819|ENST00000272167|EPHX1', 'ENST00000467015.1_1_1:226016586-226019776:+|nuORF'] 44461 14804 INNFKYIF True PC9_epitope_Rep2 1057.5596668927699 1057.55856993586 62.208 2 -0.5668215504017942 0.16296069686186743 1.0 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 83824 11158 QEEWDYLDP True H1975_Epitope_Rep1 1193.4876837209697 1193.4865899358601 47.888 2 -0.5668256857213759 0.16296069686186743 1.0 ['ENSG00000136870|ENST00000339664|ZNF189'] 61762 18349 LLKEQKCVP True PC9_epitope_Rep6 1056.6001518057599 1056.5990499358602 83.222 2 -0.5668491856027305 0.16296069686186743 1.0 ['nc|ENSG00000151208|Q8TDM6-2|DLG5'] 3691 6595 AGSAKEDRVP True PC9_epitope_Rep2 1028.5250722891997 1028.5239699358601 30.78 2 -0.5668536988936355 0.16296069686186743 1.0 ['nc|ENSG00000132970|Q9UPY6-2|WASF3'] 18685 7142 ELDAVQREYQ True H1975_Epitope_Rep3 1249.59388012501 1249.59278993586 32.444 2 -0.5668877975271763 0.16297155001690578 1.0 ['ENSG00000080986|ENST00000261597|NDC80'] 97287 9182 SFRFEVSSA True H1975_Epitope_Rep3 1028.4927095317598 1028.4916099358602 40.309 2 -0.5668926811264081 0.16297155001690578 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.G3456Afs*3|1|0.25|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant', 'FRAS1|p.G3729Afs*31|1|0.1|ENSG00000138759|chr4:78537086-78537086|G/-|frameshift_variant', 'nc|ENSG00000138759|Q86XX4-5|FRAS1'] 84514 8310 QGTRLPSL True PC9_epitope_Rep5 870.4923156089399 870.49120993586 36.903 2 -0.5669056270311308 0.16297715454091735 1.0 ['ENST00000592414.1_1_19:3055403-3056603:-|nuORF'] 55253 7187 LAQKLFNN True PC9_epitope_Rep4 946.52361573722 946.52250993586 34.947 2 -0.566937653291093 0.16297715454091735 1.0 ['nc|ENSG00000126561|P42229-2|STAT5A', 'ENSG00000126561|ENST00000590949|STAT5A', 'ENSG00000173757|ENST00000293328|STAT5B', 'ENST00000591556.1_1_17:40458135-40460407:+|nuORF', 'ENST00000468496.5_1_17:40362419-40369297:-|nuORF'] 119031 6137 VEGGPNPP True NCI_RA007_Epitope_Rep1 765.36571811349 765.36462993586 27.908 2 -0.5669723248132073 0.16297715454091735 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-4|ADGRV1'] 20019 23504 EMRKMRLRE True H1975_Epitope_Rep3 1247.6590807475498 1247.65744490379 98.079 3 -0.5670233854206049 0.16297715454091735 1.0 ['ENST00000543471.5_2_9:130187043-130190860:+|nuORF'] 130064 9851 VTQGHHLDP True H1975_Epitope_Rep1 1002.4882928576599 1002.48718993586 42.824 2 -0.56705104933666 0.16299063013169335 1.0 ['ENST00000575922.5_1_17:79205391-79205703:+|nuORF'] 129994 9674 VTPHHQRR True PC9_epitope_Rep1 1029.55804418333 1029.55694993586 42.068 2 -0.5670992442486079 0.16300148109987764 1.0 ['ENST00000488701.1_1_12:7168132-7170034:+|nuORF'] 32879 15299 GILMYELL True PC9_epitope_Rep2 950.5146908462999 950.51358993586 64.129 2 -0.5671044183141263 0.16300148109987764 1.0 ['nc|ENSG00000185532|Q13976|PRKG1', 'ENSG00000185532|ENST00000373980|PRKG1', 'nc|ENSG00000185532|Q13976-3|PRKG1', 'ENST00000373975.2_1_10:53822369-54053657:+|nuORF'] 56659 6045 LEAAGDKF True PC9_epitope_Rep4 849.42323298961 849.42212993586 30.243 2 -0.5671973576569695 0.16304452815609002 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 54256 18657 KYPHYFPLL True PC9_epitope_Rep4 1176.6331661862 1176.63151490379 79.842 3 -0.5672166494684014 0.16304452815609002 1.0 ['ENSG00000172009|ENST00000307741|THOP1'] 88168 14541 QWSFTPTQA True NCI_RA007_Epitope_Rep4 1064.49270953176 1064.4916099358602 63.304 2 -0.5672795473537442 0.1630553766902769 1.0 ['ENST00000449359.7_1_16:68391035-68391134:+|nuORF'] 69347 4828 LVQAAAVST True NCI_RA007_Epitope_Rep1 858.4810822189 858.47998993586 22.86 2 -0.5672893697218883 0.1630553766902769 1.0 ['ENSG00000151838|ENST00000537690|CCDC175'] 111721 15999 TLPVNVLVL True PC9_epitope_Rep6 966.6113681124599 966.61026993586 73.853 2 -0.5674125283718664 0.1631171423512178 1.0 ['ENST00000469810.1_3_1:52900976-52902643:-|nuORF'] 34274 16301 GPLIVDWP True PC9_epitope_Rep2 895.4803539429099 895.47924993586 67.947 2 -0.5675021003198424 0.16316018221914588 1.0 ['nc|ENSG00000113742|Q17RY0-2|CPEB4', 'ENSG00000113742|ENST00000265085|CPEB4', 'nc|ENSG00000113742|Q17RY0-3|CPEB4'] 11708 15662 DHFEKRIV True PC9_epitope_Rep4 1042.55597849466 1042.55488993586 68.171 2 -0.5675079498468708 0.16316018221914588 1.0 ['ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.R3361Lfs*17|1|0.24|ENSG00000168702|chr2:140444655-140444656|-/A|frameshift_variant', 'LRP1B|p.P3359Qfs*54|1|0.29|ENSG00000168702|chr2:140444661-140444661|G/-|frameshift_variant', 'LRP1B|p.P3292Lfs*121|1|0.15|ENSG00000168702|chr2:140456543-140456543|G/-|frameshift_variant', 'LRP1B|p.C2689Ffs*8|1|0.18|ENSG00000168702|chr2:140516972-140516972|C/-|frameshift_variant', 'LRP1B|p.R2777Dfs*83|1|0.22|ENSG00000168702|chr2:140509997-140509997|G/-|frameshift_variant'] 120378 10811 VFRVRASL True PC9_epitope_Rep3 946.5712346359799 946.57012993586 46.553 2 -0.5675552042871723 0.1631736526946108 1.0 ['nc|ENSG00000167554|Q8N9Z0-2|ZNF610', 'ENSG00000167554|ENST00000403906|ZNF610'] 54517 6604 LAAEQVAR True PC9_epitope_Rep1 856.4766655447999 856.47556993586 30.205 2 -0.5675918176661803 0.1632354124748491 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF'] 126279 11331 VPHLLTEA True PC9_epitope_Rep5 878.48616759934 878.48506993586 48.579 2 -0.567608466323801 0.16324099856749666 1.0 ['nc|ENSG00000145375|Q8NB90-3|AFG2A', 'nc|ENSG00000145375|Q8NB90-2|AFG2A', 'ENST00000422835.2_1_4:123844270-124023368:+|nuORF', 'ENSG00000145375|ENST00000274008|SPATA5', 'SPATA5|p.R538Q|1|0.05|ENSG00000145375|chr4:122947387-122947387|G/A|missense_variant'] 66481 3721 LSRSVEDVRP True NCI_RA007_Epitope_Rep2 1156.6200353032 1156.61839490379 19.119 3 -0.5676394385518881 0.16324099856749666 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 130137 16041 VTRLFKNYF True PC9_epitope_Rep5 1186.6498788795 1186.6482449037899 66.69 3 -0.5676546439639355 0.16324099856749666 1.0 ['ENST00000206423.7_2_3:112318632-112318818:-|nuORF'] 12153 12753 DIKEVRIMRWF True H1975_Epitope_Rep3 1491.80203949979 1491.8009499358602 54.268 2 -0.5676845765894849 0.16324099856749666 1.0 ['ENST00000357219.3_1_6:37186200-37186806:-|nuORF', 'ENSG00000172738|ENST00000651039|TMEM217', 'nc|ENSG00000172738|Q8N7C4|TMEM217'] 40944 7802 HWFYTRWKDWE True NCI_RA007_Epitope_Rep2 1652.7524464550795 1652.7508049037901 34.975 3 -0.5677231718978992 0.16326530612244897 1.0 ['ENSG00000019995|ENST00000359653|ZRANB1'] 55895 8681 LDGGVRKG True NCI_RA007_Epitope_Rep2 800.4504507969599 800.44934993586 38.413 2 -0.5677402708154929 0.16326530612244897 1.0 ['ENSG00000101323|ENST00000378789|HAO1'] 99807 18782 SLGSLSLHAF True PC9_epitope_Rep5 1030.54474510462 1030.54364993586 77.258 2 -0.567798490815468 0.16326530612244897 1.0 ['ENST00000355068.4_1_17:7213473-7213746:+|nuORF'] 100360 9709 SLNHEASELA True H1975_Epitope_Rep2 1069.50400249145 1069.50290993586 42.329 2 -0.5678640943579956 0.16331096196868009 1.0 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44', 'ENST00000525623.1_1_11:130106686-130108390:-|nuORF'] 58437 21416 LEWERQEIQRF True NCI_RA007_Epitope_Rep1 1532.77357582248 1532.77246993586 87.629 2 -0.5679767565384487 0.16334052209740238 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 79888 9901 PILRNKIEFKR True NCI_RA007_Epitope_Rep1 1412.86160298124 1412.8599449037902 42.515 3 -0.5680633345681686 0.16335398728574876 1.0 ['ENSG00000138002|ENST00000260570|IFT172', 'SETD6-IFT172|2|fusion', 'SETD6-IFT172|1|fusion'] 116977 20937 TYPNTYIF True PC9_epitope_Rep3 1017.48074786573 1017.4801749679301 85.811 1 -0.5680766701677911 0.16336745204068495 1.0 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 46706 11261 ITYHNELDMN True PC9_epitope_Rep6 1248.54448740444 1248.54283490379 54.324 3 -0.5680943091705313 0.1633970098331107 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF'] 30431 20334 GAGAGFGVL True H1975_Epitope_Rep1 747.3915389385099 747.39099496793 84.577 1 -0.568131091315352 0.16342656667417682 1.0 ['nc|ENSG00000040633|Q9BUL5-3|PHF23', 'nc|ENSG00000040633|Q9BUL5-4|PHF23', 'ENSG00000040633|ENST00000320316|PHF23'] 33892 23945 GLWRRRELWFW True PC9_epitope_Rep5 1603.85243527987 1603.8513299358601 97.086 2 -0.5681805582247323 0.16345612256392925 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 14290 5902 DTALHVALQR True H1975_Epitope_Rep3 1122.61455599994 1122.6134499358602 27.712 2 -0.5682215589608209 0.16346958480849694 1.0 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'ENST00000479659.5_1_1:1561777-1565907:+|nuORF', 'nc|ENSG00000197530|Q96AX9-7|MIB2', 'nc|ENSG00000197530|Q96AX9-5|MIB2', 'ENST00000511502.5_1_1:1563563-1565907:+|nuORF', 'ENST00000506488.5_1_1:1562112-1565907:+|nuORF'] 58757 12790 LFLPNYVQD True NCI_RA007_Epitope_Rep5 1107.5600608155898 1107.5589699358602 55.877 2 -0.5682230212132997 0.16348304661978405 1.0 ['ENSG00000171798|ENST00000304613|KNDC1', 'KNDC1|p.S1522I|1|0.09|ENSG00000171798|chr10:133214010-133214010|G/T|missense_variant'] 134780 14085 WYFWRRHVFIW True NCI_RA007_Epitope_Rep1 1694.8622716875798 1694.86063490379 58.817 3 -0.5682745613897658 0.1635126001737955 1.0 ['ENSG00000187688|ENST00000338560|TRPV2', 'ENST00000441875.1_1_17:16330801-16331912:+|nuORF'] 29400 10329 FVFKERWFWRV True NCI_RA007_Epitope_Rep2 1598.8510382975398 1598.84938490379 44.767 3 -0.5683092001431852 0.1635260608596302 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 127420 7494 VQRLKEDRSSL True H1975_Epitope_Rep3 1329.73646203777 1329.73480490379 33.808 3 -0.5684242955668108 0.16355561277033986 1.0 ['ENST00000412023.5_1_12:6993487-6993658:+|nuORF'] 44717 11480 IPQDALPP True H1975_Epitope_Rep1 849.45961849833 849.45852993586 49.141 2 -0.5684653055146213 0.16356380838978551 1.0 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 132953 9837 VYTWHQDGL True PC9_epitope_Rep2 1117.5192586327698 1117.5181699358602 43.173 2 -0.5684968847508693 0.16356380838978551 1.0 ['ENSG00000134398|ENST00000256797|ERN2'] 24445 6588 FAGSASSLH True NCI_RA007_Epitope_Rep1 875.4137309350701 875.41262993586 29.638 2 -0.5685417070981136 0.16356380838978551 1.0 ['ZIC3|p.P329Hfs*79|1|0.45|ENSG00000156925|chrX:137567675-137567675|C/-|frameshift_variant', 'nc|ENSG00000156925|O60481-2|ZIC3', 'ENSG00000156925|ENST00000287538|ZIC3'] 895 8798 ADLVPRRGYQE True NCI_RA007_Epitope_Rep1 1302.6680481247802 1302.6669499358602 38.225 2 -0.5686291641989838 0.16357726716869408 1.0 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'nc|ENSG00000066827|Q9P243-3|ZFAT'] 100118 21181 SLLATAILGA True PC9_epitope_Rep5 928.5593325395998 928.55822993586 86.521 2 -0.5686840112789797 0.16360418342719227 1.0 ['ENSG00000146802|ENST00000312814|TMEM168'] 96967 15189 SEVFHVNISL True PC9_epitope_Rep2 1143.59242357303 1143.5913299358601 63.685 2 -0.5686903135635134 0.16360418342719227 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 136592 9787 YHVRREDLGK True NCI_RA007_Epitope_Rep2 1271.67346785839 1271.6718149037902 42.692 3 -0.5687607083671845 0.1636176409068237 1.0 ['nc|ENSG00000188877|Q6S8J7-2|POTEA', 'nc|ENSG00000188877|Q6S8J7|POTEA'] 85672 8698 QLQQRLQLQ True NCI_RA007_Epitope_Rep1 1153.6567551650899 1153.65564993586 37.834 2 -0.5687824129088305 0.16363109795340455 1.0 ['nc|ENSG00000103460|O15405-2|TOX3', 'ENSG00000103460|ENST00000219746|TOX3'] 124878 19899 VLLMFGLLLHL True NCI_RA007_Epitope_Rep1 1267.7726368644699 1267.77100490379 81.608 3 -0.5689010824099191 0.16369282255080206 1.0 ['nc|ENSG00000204544|Q5SSG8-3|MUC21', 'ENSG00000204544|ENST00000376296|MUC21', 'nc|ENSG00000204544|Q5SSG8-2|MUC21'] 18860 12738 ELEIRFSKDHK True H1975_Epitope_Rep3 1400.7412130650398 1400.7401099358601 54.207 2 -0.5689865593870598 0.16370627795475753 1.0 ['ENSG00000163214|ENST00000457308|DHX57', 'nc|ENSG00000163214|Q6P158-2|DHX57', 'DHX57|p.S709Qfs*30|1|0.28|ENSG00000163214|chr2:38848308-38848308|A/-|frameshift_variant', 'nc|ENSG00000163214|Q6P158-3|DHX57', 'ENST00000479345.2_1_2:39084268-39090579:-|nuORF'] 134487 11294 WTVERKRP True H1975_Epitope_Rep3 1070.5985120129799 1070.59740993586 48.548 2 -0.5690514727390039 0.16371973292575015 1.0 ['nc|ENSG00000085982|Q9NVE5|USP40', 'ENSG00000085982|ENST00000678225|USP40', 'nc|ENSG00000085982|Q9NVE5-3|USP40'] 102285 10219 SPTVAKQIFP True NCI_RA007_Epitope_Rep4 1086.60734536118 1086.6062499358602 46.163 2 -0.5691138077901479 0.16373318746380075 1.0 ['ENSG00000105997|ENST00000612286|HOXA3', 'HOXA3|p.P344Rfs*32|1|0.41|ENSG00000105997|chr7:27108216-27108216|G/-|frameshift_variant'] 105121 11177 STLPKSLSL True PC9_epitope_Rep3 944.55424715916 944.55314993586 47.997 2 -0.5691304109035891 0.16373902132998747 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 99328 11361 SLDPRFRQYTY True H1975_Epitope_Rep2 1444.7099129367598 1444.70880993586 48.749 2 -0.569152305138187 0.16373902132998747 1.0 ['nc|ENSG00000004139|Q6SZW1-2|SARM1', 'ENSG00000004139|ENST00000585482|SARM1', 'ENST00000379061.8_1_17:26708312-26722930:+|nuORF'] 919 9834 ADSAGLLPP True NCI_RA007_Epitope_Rep3 839.4388830537499 839.43833496793 45.755 1 -0.5691882714793158 0.16373902132998747 1.0 ['ENST00000368324.4_1_1:155854169-155854304:+|nuORF'] 5825 20108 APGALLLE True PC9_epitope_Rep2 782.4538048419 782.45270993586 82.755 2 -0.5692255822179609 0.16373902132998747 1.0 ['ENSG00000215305|ENST00000380445|VPS16'] 9946 16671 AYQVRDTAI True PC9_epitope_Rep2 1035.5349086969097 1035.53380993586 69.367 2 -0.5692490481448109 0.16373902132998747 1.0 ['ENSG00000109991|ENST00000263314|P2RX3'] 100415 15922 SLPAAQYCL True PC9_epitope_Rep1 964.46880328304 964.46770993586 66.054 2 -0.5692809723125085 0.16373902132998747 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'nc|ENSG00000170638|Q9H4I3-2|TRABD', 'ENST00000463233.1_1_22:50636418-50636945:+|nuORF'] 82090 5845 PSYSSRTPG True PC9_epitope_Rep2 950.4457593393399 950.44466993586 27.878 2 -0.5692842782802939 0.16373902132998747 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'nc|ENSG00000078018|P11137-2|MAP2', 'nc|ENSG00000078018|P11137-4|MAP2'] 43167 7284 IGSFSQAEPPE True H1975_Epitope_Rep2 1160.5349682665599 1160.5338699358601 32.956 2 -0.569301920629137 0.16373902132998747 1.0 ['ENST00000273317.4_1_3:45720128-45720437:+|nuORF'] 125520 16027 VLVSVGLLGL True PC9_epitope_Rep4 968.6270181765998 968.62592993586 69.58 2 -0.569310977524779 0.16373902132998747 1.0 ['ENST00000225964.9_1_17:48274384-48275320:-|nuORF'] 138502 19980 YRIREFRQTFR True PC9_epitope_Rep1 1570.84807817542 1570.84642490379 81.678 3 -0.5693342724049713 0.16373902132998747 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 64585 23666 LRDWTPPRL True NCI_RA007_Epitope_Rep4 1152.64037682496 1152.63874490379 102.64 3 -0.5693650177725335 0.16375247317708752 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47655184-47666418:-|nuORF'] 93160 25187 RRRRRALR True PC9_epitope_Rep5 1138.7384085871397 1138.7373099358601 102.03 2 -0.5693845288418672 0.16376592459142966 1.0 ['ENST00000291295.13_1_19:47104533-47109093:+|nuORF'] 32977 7527 GITGWRDLPS True NCI_RA007_Epitope_Rep2 1100.56145779792 1100.56036993586 33.904 2 -0.5694691813054743 0.1638249959787679 1.0 ['ENSG00000085760|ENST00000263629|MTIF2'] 55993 10439 LDIPEHLIP True H1975_Epitope_Rep1 1045.58079626017 1045.5796899358602 45.109 2 -0.5695291683312385 0.1638249959787679 1.0 ['EOLA2|p.V145L|1|0.14|ENSG00000197021|chrX:149932588-149932588|C/A|missense_variant'] 123793 9027 VITGITDPG True NCI_RA007_Epitope_Rep4 871.46509780159 871.46454496793 41.554 1 -0.5695845552251061 0.16384925932478728 1.0 ['ENST00000599671.1_1_19:52399801-52400277:-|nuORF'] 62937 10334 LNDAFQKGGP True PC9_epitope_Rep3 1045.51925863277 1045.5181699358602 44.693 2 -0.569653262603496 0.16384925932478728 1.0 ['ENSG00000120915|ENST00000521400|EPHX2', 'ENST00000520623.5_1_8:27348689-27396319:+|nuORF'] 68153 12627 LTPRALSIP True PC9_epitope_Rep1 966.5862159937799 966.58510993586 53.44 2 -0.5696803249063219 0.16384925932478728 1.0 ['ENST00000578788.1_1_17:8870862-8871099:+|nuORF'] 89533 3945 RERPPEEVAA True NCI_RA007_Epitope_Rep2 1152.58873517492 1152.5870849037901 19.981 3 -0.5697084304862683 0.16386007237635705 1.0 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 36970 18433 GVRKRRVRP True PC9_epitope_Rep1 1122.7210271874999 1122.71938490379 75.693 3 -0.5697204846387238 0.16386007237635705 1.0 ['ENST00000416255.5_1_2:101179854-101179926:+|nuORF'] 16161 12270 EEERMKQKAEK True NCI_RA007_Epitope_Rep1 1404.7031133041598 1404.7020099358601 51.697 2 -0.569726480855323 0.16387352032938754 1.0 ['ENST00000489152.5_1_2:74717680-74718064:+|nuORF', 'ENST00000449459.5_1_2:74710449-74718064:+|nuORF', 'nc|ENSG00000115282|Q49AM3-2|TTC31', 'ENST00000464241.5_1_2:74710222-74719357:+|nuORF', 'ENSG00000115282|ENST00000233623|TTC31'] 66914 17224 LSWYHGAI True PC9_epitope_Rep1 945.47085188837 945.46974993586 71.071 2 -0.5697769884475377 0.16388696784984802 1.0 ['ENST00000558685.1_1_15:45464079-45464229:-|nuORF'] 44273 14656 ILVLSYFRYMR True PC9_epitope_Rep1 1459.80097687063 1459.79932490379 61.196 3 -0.5697984686860869 0.16390041493775934 1.0 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 19704 15310 ELSGSLLQSV True PC9_epitope_Rep6 1031.54989005471 1031.5487899358602 71.008 2 -0.5698125958171367 0.1639138615931424 1.0 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2', 'ENST00000489952.5_1_11:64559674-64566943:-|nuORF'] 97537 8479 SGTSDPYVKI True NCI_RA007_Epitope_Rep2 1065.5342399905699 1065.5331499358601 37.625 2 -0.5698463503540564 0.16392730781601803 1.0 ['ENSG00000170743|ENST00000318881|SYT9'] 60291 10734 LIEQPIKNL True H1975_Epitope_Rep3 1066.63864548946 1066.63754993586 46.367 2 -0.5699136123275487 0.1639541989643305 1.0 ['ENST00000315183.11_2_16:24836827-24836932:+|nuORF'] 45795 12526 ISNWFEQDDWY True H1975_Epitope_Rep3 1501.6150094924099 1501.6139099358602 53.378 2 -0.5699240177677188 0.1639541989643305 1.0 ['nc|ENSG00000150627|Q8IZU2|WDR17'] 111711 11560 TLPSLESLE True PC9_epitope_Rep2 987.51244191683 987.51134993586 49.791 2 -0.5699488536365517 0.16397845139503095 1.0 ['ENST00000512908.2_1_5:70398727-70422449:-|nuORF', 'ENST00000315147.8_1_5:70265933-70281744:-|nuORF', 'ENST00000511830.2_1_5:69390488-69422514:-|nuORF', 'nc|ENSG00000249437|Q13075-2|NAIP', 'ENSG00000249437|ENST00000517649|NAIP'] 134902 22108 YADPSILYI True PC9_epitope_Rep1 1053.5382627418498 1053.53767496793 89.85 1 -0.5699778373500094 0.16397845139503095 1.0 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000490851.5_1_7:18832955-19035682:+|nuORF'] 38365 7259 HGELGGHP True PC9_epitope_Rep1 802.3722004762601 802.37110993586 32.735 2 -0.57001478680868 0.16397845139503095 1.0 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2'] 121751 14202 VGLTLEEAI True PC9_epitope_Rep3 943.52261267771 943.52150993586 59.714 2 -0.570081013555295 0.1640027014858172 1.0 ['ENSG00000086504|ENST00000199706|MRPL28'] 9394 12912 AVVGSSVLQ True PC9_epitope_Rep5 858.4810822188999 858.47998993586 54.677 2 -0.5700938081043919 0.1640027014858172 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4'] 15119 9989 EAECRKWEEK True NCI_RA007_Epitope_Rep2 1306.59758560646 1306.59648993586 43.477 2 -0.5701637892294086 0.1640027014858172 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'nc|ENSG00000158486|Q8TD57-3|DNAH3'] 65244 11718 LSEEWEELLVE True NCI_RA007_Epitope_Rep2 1374.6554773220598 1374.65438993586 50.175 2 -0.5702322603936432 0.16403222434835743 1.0 ['nc|ENSG00000187867|A6NDB9|PALM3', 'ENSG00000187867|ENST00000669674|PALM3'] 116179 23636 TVTITVLDI True PC9_epitope_Rep5 973.5695628701299 973.56846993586 95.895 2 -0.5704411363185434 0.16409390577263225 1.0 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 59187 14221 LGFQKRWRK True PC9_epitope_Rep3 1217.71454482473 1217.7128849037902 59.786 3 -0.5704999844465873 0.16410734672219454 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 22950 19461 EVHLKFLL True PC9_epitope_Rep5 997.5960524014898 997.59494993586 79.909 2 -0.5706531231963602 0.16418246426446706 1.0 ['ENST00000497136.6_1_10:122626245-122665534:+|nuORF', 'ENSG00000120008|ENST00000263461|WDR11'] 66061 12298 LSNIFVIGK True NCI_RA007_Epitope_Rep4 989.5909670210499 989.58986993586 54.301 2 -0.5706718586275663 0.16418246426446706 1.0 ['ENSG00000198034|ENST00000316084|RPS4X', 'ENST00000470671.1_1_X:71475533-71493153:-|nuORF', 'ENST00000595905.1_1_13:52035288-52035378:+|nuORF'] 110232 15325 TIENFHVV True PC9_epitope_Rep5 957.49198125577 957.49088993586 63.958 2 -0.5706962182140379 0.16420670139558813 1.0 ['nc|ENSG00000113163|Q9Y5P4-2|CERT1', 'ENSG00000113163|ENST00000643780|CERT1', 'nc|ENSG00000113163|Q9Y5P4-3|CERT1'] 40327 21860 HRRVRLHRHG True NCI_RA007_Epitope_Rep2 1322.76568596414 1322.7645899358602 90.627 2 -0.5707139923174752 0.16420670139558813 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 112341 23181 TMRIRKRRKM True PC9_epitope_Rep5 1374.8176470776195 1374.8160149037901 94.148 3 -0.5707196561848099 0.16420670139558813 1.0 ['ZFPM2|p.T735I|1|0.53|ENSG00000169946|chr8:105802286-105802286|C/T|missense_variant'] 111600 15217 TLNMIRQIYP True H1975_Epitope_Rep2 1247.66962834791 1247.66852993586 63.688 2 -0.5707792475167454 0.16423621718089296 1.0 ['nc|ENSG00000198130|Q6NVY1-2|HIBCH', 'ENSG00000198130|ENST00000359678|HIBCH'] 14532 14203 DVANRLEVI True PC9_epitope_Rep3 1027.56620882519 1027.5651099358602 59.718 2 -0.5707991389309377 0.16424965432972122 1.0 ['ENSG00000132300|ENST00000254630|PTCD3', 'ENST00000493430.5_1_2:86360492-86361450:+|nuORF', 'ENST00000469585.5_1_2:86355098-86362111:+|nuORF', 'ENST00000487043.5_1_2:86355098-86363686:+|nuORF', 'nc|ENSG00000132300|Q96EY7-2|PTCD3'] 137534 6637 YLQTPMYFFLR True NCI_RA007_Epitope_Rep2 1477.7427932881699 1477.7411549037902 30.428 3 -0.5708462485967334 0.1642604501607717 1.0 ['OR6C1|p.H52Y|1|0.34|ENSG00000205330|chr12:55320753-55320753|C/T|missense_variant'] 40711 5771 HTRIPALSP True NCI_RA007_Epitope_Rep1 990.5610638751 990.55996993586 26.502 2 -0.5708718550764066 0.1642604501607717 1.0 ['ENST00000595465.6_1_19:15512376-15521402:-|nuORF', 'ENST00000397410.9_1_19:15514352-15521390:-|nuORF'] 41829 7066 IDSRVQEY True PC9_epitope_Rep2 1008.4876241513198 1008.48652993586 32.577 2 -0.5709420028713637 0.16430339860454649 1.0 ['ENSG00000149346|ENST00000334534|SLX4IP'] 98729 18819 SIRRVYTRL True NCI_RA007_Epitope_Rep4 1162.69347502698 1162.69183490379 81.409 3 -0.570942637480269 0.16430339860454649 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 56932 6675 LEDSLQAQ True H1975_Epitope_Rep2 902.4345259493 902.43342993586 30.585 2 -0.5709764568739585 0.16430362654320987 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 54027 12586 KYLQPKVNP True PC9_epitope_Rep1 1085.62332977849 1085.62222993586 53.279 2 -0.5709875147054395 0.16430362654320987 1.0 ['ENST00000456324.5_1_19:36727248-36727317:+|nuORF'] 79782 17298 PHWWRTYREYF True PC9_epitope_Rep1 1639.76843087239 1639.76677490379 71.353 3 -0.5710600812830393 0.16430362654320987 1.0 ['ENSG00000204316|ENST00000309352|MRPL38', 'ENST00000410030.1_1_17:73900359-73901082:-|nuORF', 'ENST00000464758.1_1_17:73900462-73900977:-|nuORF', 'ENST00000493383.5_1_17:73897833-73900929:-|nuORF', 'ENST00000477736.5_1_17:73897061-73900795:-|nuORF', 'ENST00000493104.5_1_17:73897660-73900929:-|nuORF'] 1752 7273 AEGYKGHVGVP True H1975_Epitope_Rep3 1112.5614577979197 1112.56036993586 32.95 2 -0.5710621186398984 0.16430362654320987 1.0 ['nc|ENSG00000171502|Q17RW2-2|COL24A1', 'ENSG00000171502|ENST00000370571|COL24A1'] 81158 23512 PPLCFFLLLL True PC9_epitope_Rep6 1174.68242487774 1174.68132993586 103.57 2 -0.5711044201571462 0.16430362654320987 1.0 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000600281.1_1_19:12776145-12777515:-|nuORF', 'ENST00000466794.5_1_19:12769146-12777470:-|nuORF'] 121229 11494 VGGQERTWVRP True H1975_Epitope_Rep3 1283.6734678583898 1283.6723699358602 49.335 2 -0.5712069705633811 0.16430362654320987 1.0 ['ENST00000568500.1_1_16:30709907-30710114:-|nuORF'] 136632 6927 YIDHDISM True NCI_RA007_Epitope_Rep1 992.4273323938801 992.42622993586 30.949 2 -0.5712191367467767 0.16431441890371323 1.0 ['ENSG00000182950|ENST00000332145|ODF3L1'] 88088 7695 QVVMNSHSYNG True NCI_RA007_Epitope_Rep2 1234.54007073034 1234.5389699358602 34.558 2 -0.5712284527288021 0.16431441890371323 1.0 ['nc|ENSG00000105642|Q92952-2|KCNN1'] 95722 3521 SCCCCCCC True PC9_epitope_Rep3 826.10688658094 826.10578993586 18.668 2 -0.5713557640428885 0.16437343277824215 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 19311 9450 ELLWGHRFEP True NCI_RA007_Epitope_Rep1 1282.6458561282202 1282.64474993586 40.752 2 -0.5713762766986505 0.16437343277824215 1.0 ['ENSG00000182324|ENST00000342291|KCNJ14'] 139195 7930 YSTGLNSAY True NCI_RA007_Epitope_Rep2 974.4345259493 974.43397496793 35.477 1 -0.571441041314858 0.16438422220079082 1.0 137892 6827 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.3921149679301 31.666 1 -0.5714518023587841 0.16438422220079082 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 258 4959 AAGKAEAEAA True H1975_Epitope_Rep2 887.4348603024698 887.43376993586 24.158 2 -0.5715452413496785 0.16441372659326528 1.0 ['ENST00000405914.1_1_2:26204855-26205579:-|nuORF'] 117517 11569 VAFCYSSL True PC9_epitope_Rep3 888.4051403973199 888.40404993586 49.515 2 -0.5716311287646959 0.164443444440873 1.0 ['ENSG00000146383|ENST00000275198|TAAR6'] 14140 8968 DSGVPGLEADT True NCI_RA007_Epitope_Rep5 1059.4720336568298 1059.47092993586 41.153 2 -0.5716638575315034 0.164443444440873 1.0 ['ENST00000526990.1_1_11:65349145-65351290:+|nuORF', 'ENSG00000173442|ENST00000309295|EHBP1L1'] 12879 13533 DLLLPTGLEPL True PC9_epitope_Rep1 1179.67509056783 1179.6734549037901 56.91 3 -0.5716860308992653 0.164443444440873 1.0 ['ENSG00000114631|ENST00000342480|PODXL2', 'nc|ENSG00000114631|Q9NZ53-2|PODXL2'] 112396 8934 TNEYGGNSL True PC9_epitope_Rep5 953.4090394774499 953.40794993586 39.309 2 -0.5716902967452674 0.164443444440873 1.0 ['ENSG00000169393|ENST00000339841|ELSPBP1'] 896 8662 ADLVPRRGYQE True NCI_RA007_Epitope_Rep2 1302.6680481247802 1302.6669499358602 38.34 2 -0.5717475286452617 0.164443444440873 1.0 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'nc|ENSG00000066827|Q9P243-3|ZFAT'] 66169 12309 LSPFREFQRWK True NCI_RA007_Epitope_Rep1 1492.7939173442398 1492.79282993586 51.85 2 -0.5718103874896427 0.164443444440873 1.0 ['ENSG00000171503|ENST00000511912|ETFDH', 'nc|ENSG00000171503|Q16134-3|ETFDH'] 9253 11159 AVQQYRQKMRW True NCI_RA007_Epitope_Rep1 1492.7721363538399 1492.77102993586 47.404 2 -0.5718243558442729 0.164443444440873 1.0 ['nc|ENSG00000160072|Q5T9A4-3|ATAD3B', 'ENST00000472194.6_1_1:1413873-1431194:+|nuORF', 'ENSG00000160072|ENST00000673477|ATAD3B', 'ENST00000474481.1_1_1:1425808-1431194:+|nuORF'] 76262 10559 NSDNNLFTDT True PC9_epitope_Rep4 1139.4730962859899 1139.4719899358602 48.346 2 -0.5718591899312454 0.16445422987914632 1.0 ['NBN|p.L708*|1|0.21|ENSG00000104320|chr8:89943316-89943316|A/-|frameshift_variant', 'ENSG00000104320|ENST00000265433|NBN'] 7913 7434 ATCYLMLQFVP True H1975_Epitope_Rep1 1284.62465230144 1284.6235499358602 33.598 2 -0.5718759229759445 0.16445422987914632 1.0 ['ENST00000299977.8_1_17:33586011-33586149:+|nuORF'] 129007 11274 VSYQSVLS True H1975_Epitope_Rep2 881.4494477374499 881.4488949679301 48.412 1 -0.5719197817028837 0.1644705126144946 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF', 'ENST00000590884.5_1_18:43437816-43458370:-|nuORF'] 62055 7083 LLMCRDIP True NCI_RA007_Epitope_Rep2 959.4932442090699 959.49214993586 32.176 2 -0.571941182555901 0.1644705126144946 1.0 ['ENST00000312629.9_1_11:67201493-67201693:+|nuORF'] 58747 21686 LFLLQPTV True PC9_epitope_Rep4 929.55860426361 929.55750993586 91.617 2 -0.5719421675658667 0.1644705126144946 1.0 ['NXPH1|p.V201Lfs*37|1|0.33|ENSG00000122584|chr7:8751553-8751553|G/-|frameshift_variant', 'ENSG00000122584|ENST00000405863|NXPH1'] 69362 10847 LVQATALHHSQ True H1975_Epitope_Rep3 1203.6360197205101 1203.63492993586 46.805 2 -0.5719516565014185 0.1644705126144946 1.0 ['PCDH11X|p.P1235Q|1|0.5|ENSG00000102290|chrX:92618600-92618600|C/A|missense_variant'] 33365 13695 GLELERSELFK True NCI_RA007_Epitope_Rep1 1319.7085159544297 1319.7074099358601 57.284 2 -0.5719540463968968 0.1644705126144946 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 101165 14590 SLVRAILGT True PC9_epitope_Rep2 928.5705659296399 928.56946993586 61.39 2 -0.5719657474145086 0.1644705126144946 1.0 ['nc|ENSG00000141391|Q96N28-2|PRELID3A', 'ENSG00000141391|ENST00000440960|PRELID3A'] 73305 7759 NEKTDKERTFD True NCI_RA007_Epitope_Rep1 1381.6473722498497 1381.6462699358601 34.173 2 -0.5720180626046141 0.16447336707640395 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 94058 16399 RVRVKGGG True H1975_Epitope_Rep3 827.5089687325898 827.50786993586 68.552 2 -0.572068688770394 0.16447336707640395 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 14496 6348 DTWESLQK True NCI_RA007_Epitope_Rep5 1005.47672511445 1005.4761749679301 31.092 1 -0.5721000020874023 0.16447336707640395 1.0 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 85199 8726 QKFEKDQII True PC9_epitope_Rep3 1147.6237237013097 1147.62208490379 38.516 3 -0.5721336482953242 0.16447336707640395 1.0 ['ENSG00000136021|ENST00000360820|SCYL2', 'ENST00000549486.1_1_12:100685283-100685439:+|nuORF'] 94057 16310 RVRVKGGG True H1975_Epitope_Rep3 827.5089687325898 827.50786993586 68.21 2 -0.5721402650481848 0.16447336707640395 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 8636 7834 AVANRSKKSRA True NCI_RA007_Epitope_Rep1 1186.6894522757 1186.68834993586 34.463 2 -0.5721573602077669 0.1644867922102963 1.0 ['ENSG00000181104|ENST00000319211|F2R'] 28258 19776 FRVALRPRP True PC9_epitope_Rep1 1110.6774310400199 1110.6763299358602 80.892 2 -0.5722719688148845 0.16454577589254155 1.0 ['ENSG00000125731|ENST00000245908|SH2D3A', 'ENST00000595369.1_1_19:6759548-6763810:-|nuORF', 'ENST00000595681.5_1_19:6754625-6763810:-|nuORF'] 114504 7608 TSFSPPPPP True H1975_Epitope_Rep1 925.4545331178898 925.45342993586 34.256 2 -0.5722949437703605 0.16454577589254155 1.0 ['ENST00000237536.8_2_20:35414273-35414927:-|nuORF'] 133927 22779 WNRRVQQRRHL True NCI_RA007_Epitope_Rep1 1547.8657939282298 1547.86414490379 93.441 3 -0.5724104677267717 0.16458604456869266 1.0 ['ENST00000589838.5_1_19:11548888-11548933:+|nuORF'] 140083 18517 YVPCEPQGL True PC9_epitope_Rep4 1004.4637179025999 1004.46262993586 79.299 2 -0.572425791509442 0.16458604456869266 1.0 ['ENSG00000161850|ENST00000257974|KRT82', 'CON__Q9NSB4'] 1306 11703 AEDVYDVPPP True H1975_Epitope_Rep2 1100.50260550912 1100.5015099358602 50.091 2 -0.5724420517178214 0.16458604456869266 1.0 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 44430 9248 INIQLLAEDRL True NCI_RA007_Epitope_Rep2 1296.7401504358797 1296.73904993586 40.583 2 -0.5724571225139499 0.16461288819626305 1.0 ['ENST00000493315.1_1_2:63631156-63711794:-|nuORF', 'nc|ENSG00000143951|O95876-3|WDPCP', 'nc|ENSG00000143951|O95876-2|WDPCP', 'ENST00000409835.5_1_2:63587012-63815411:-|nuORF', 'ENSG00000143951|ENST00000272321|WDPCP'] 68500 19262 LTVLETPSL True PC9_epitope_Rep3 971.5539128059901 971.55280993586 79.312 2 -0.5724621158974592 0.16461288819626305 1.0 ['ENST00000495037.1_1_3:66430689-66454678:-|nuORF', 'ENST00000496559.6_1_3:66430689-66456253:-|nuORF', 'ENSG00000144749|ENST00000273261|LRIG1'] 93849 12226 RVFRALLVQWD True H1975_Epitope_Rep1 1401.7881036878098 1401.7870099358602 52.048 2 -0.5724916614962985 0.16462630936315148 1.0 ['ENST00000327097.4_1_2:119739014-119739962:+|nuORF'] 83406 12707 QAVLRKFDEL True PC9_epitope_Rep6 1217.67682190333 1217.67572993586 60.356 2 -0.5725149029465888 0.1646370851139029 1.0 ['nc|ENSG00000152939|Q8N4S9-3|MARVELD2', 'ENSG00000152939|ENST00000325631|MARVELD2'] 94055 16329 RVRVKGGG True H1975_Epitope_Rep1 827.5089687325898 827.50786993586 68.166 2 -0.5725178595990884 0.1646370851139029 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 6970 10601 AQPGTLKEVWS True PC9_epitope_Rep5 1214.6295373577398 1214.62844993586 45.764 2 -0.5725555632493708 0.16464521518417966 1.0 ['nc|ENSG00000149305|O95264-2|HTR3B', 'ENSG00000149305|ENST00000260191|HTR3B'] 56653 7111 LEAAGDKF True PC9_epitope_Rep1 849.42323298961 849.42212993586 32.162 2 -0.5725557747175137 0.16464521518417966 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 45760 3025 ISNIEDLPP True H1975_Epitope_Rep2 996.5127762699999 996.51166993586 15.956 2 -0.5725668062408611 0.16464521518417966 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 15279 8074 EAGVTGIRRW True H1975_Epitope_Rep3 1143.61489035311 1143.61378993586 36.031 2 -0.5726908074162557 0.16470682730923694 1.0 ['RC3H2|p.R156Pfs*98|1|0.31|ENSG00000056586|chr9:122890428-122890429|-/G|frameshift_variant'] 45879 11199 ISQSYILML True PC9_epitope_Rep5 1066.5732683515798 1066.57216993586 48.064 2 -0.5727831942719672 0.1647523734558481 1.0 ['ENST00000493541.1_1_6:83839942-83844118:+|nuORF'] 5378 8124 ALTVDAHTV True PC9_epitope_Rep6 925.48689587533 925.48578993586 40.787 2 -0.5728106746930642 0.16476049731744144 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 127107 16689 VQAVIEQL True PC9_epitope_Rep3 898.5123823471799 898.5118349679301 69.329 1 -0.5728653895645762 0.16476049731744144 1.0 ['ENST00000471757.5_1_2:96691131-96693504:-|nuORF', 'nc|ENSG00000186281|Q6NUI2-3|GPAT2', 'ENST00000486463.5_1_2:96687909-96693504:-|nuORF', 'ENST00000484440.5_1_2:96688852-96698107:-|nuORF', 'nc|ENSG00000186281|Q6NUI2|GPAT2', 'ENSG00000186281|ENST00000434632|GPAT2'] 134463 11170 WTQMWNRPCR True PC9_epitope_Rep1 1376.623029592 1376.6219299358602 47.851 2 -0.5728813567711162 0.16476049731744144 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 20 7364 AAAADMAY True H1975_Epitope_Rep3 782.32689007662 782.32578993586 33.301 2 -0.5728965426509502 0.16476862039610005 1.0 ['ENSG00000116783|ENST00000326637|TNNI3K', 'nc|ENSG00000116783|Q59H18-1|TNNI3K', 'TNNI3K|p.V750Efs*11|1|0.31|ENSG00000116783|chr1:74492162-74492171|GGTGAACCGG/-|frameshift_variant', 'nc|ENSG00000116783|Q59H18-4|TNNI3K'] 62924 9700 LNAKALAG True PC9_epitope_Rep2 756.4493881678 756.44828993586 42.65 2 -0.5729034971403801 0.16476862039610005 1.0 ['ENST00000323013.6_1_22:42908285-42908810:-|nuORF'] 62614 11474 LLVKPEVLL True NCI_RA007_Epitope_Rep4 1022.6739683690199 1022.6728699358599 51.068 2 -0.5729045844311195 0.16476862039610005 1.0 ['ENST00000605778.1_1_7:35735152-35735278:+|nuORF'] 82526 17193 PVFLCESW True PC9_epitope_Rep5 979.44733956247 979.44624993586 71.153 2 -0.5729687574458826 0.1648436370645208 1.0 ['ENST00000250916.5_1_19:1852642-1853044:-|nuORF'] 9187 16219 AVPEEGLAQV True PC9_epitope_Rep1 1011.5236753068697 1011.52256993586 67.205 2 -0.5729841703583345 0.1648436370645208 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant', 'nc|ENSG00000182095|O15417-4|TNRC18'] 140480 9038 YYIFESYYFPM True H1975_Epitope_Rep2 1521.6526408710897 1521.6515499358602 39.718 2 -0.5730716205380469 0.16487311275297142 1.0 ['CON__Q2TBQ1'] 133842 22049 WLWWQPWWWWK True PC9_epitope_Rep3 1786.85612367798 1786.85502993586 90.108 2 -0.5731188814805557 0.16488652607571352 1.0 ['chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 89704 6307 REYPDGTVKT True NCI_RA007_Epitope_Rep1 1164.5775017848796 1164.57640993586 28.558 2 -0.5731892946248122 0.1648893457103395 1.0 ['ENSG00000151849|ENST00000381884|CENPJ'] 111185 11457 TLFEQQNMY True H1975_Epitope_Rep3 1172.51721002744 1172.5161099358602 49.188 2 -0.5732124801412922 0.1648893457103395 1.0 ['ENSG00000091262|ENST00000205557|ABCC6', 'nc|ENSG00000091262|O95255-3|ABCC6', 'ABCC6|p.Y695Tfs*14|1|0.5|ENSG00000091262|chr16:16182577-16182577|G/-|frameshift_variant', 'ENST00000574094.5_1_16:16275679-16317348:-|nuORF'] 110860 15232 TLAAHLTAEF True PC9_epitope_Rep2 1072.55530978832 1072.5542099358602 63.857 2 -0.5732229337812716 0.1648893457103395 1.0 ['HBA2|p.P115T|1|0.25|ENSG00000206172|chr16:173514-173514|C/A|missense_variant'] 14700 12813 DVQALSLWQKF True NCI_RA007_Epitope_Rep1 1333.7030366511697 1333.70192993586 53.829 2 -0.5732261346292031 0.1648893457103395 1.0 ['ENSG00000146282|ENST00000369536|RARS2'] 40884 5429 HVNVAGLK True NCI_RA007_Epitope_Rep2 836.4868363056798 836.48572993586 25.736 2 -0.5732366513655172 0.1648893457103395 1.0 ['nc|ENSG844|Q9WJR5|ERVK-19_pol'] 98802 16670 SITEEFYRYML True PC9_epitope_Rep1 1450.6802526012598 1450.67914993586 68.949 2 -0.573250183968781 0.16491881735108485 1.0 ['nc|ENSG00000153820|Q2M3C7-2|SPHKAP', 'ENSG00000153820|ENST00000392056|SPHKAP'] 34146 9554 GPDMPRGCDP True H1975_Epitope_Rep3 1043.41645044035 1043.4153499358601 41.758 2 -0.573301761089799 0.16493222843193936 1.0 ['ENSG00000088053|ENST00000310373|GP6'] 126932 13988 VPVGIVAV True H1975_Epitope_Rep2 752.4796256669199 752.47907496793 58.954 1 -0.5733039187248385 0.16494034141092964 1.0 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 99021 22786 SKQRRSRRKK True PC9_epitope_Rep4 1328.8225321339198 1328.8214299358601 95.867 2 -0.5733328804566378 0.16494034141092964 1.0 ['ENSG00000122859|ENST00000242462|NEUROG3'] 15577 5596 EATEWQHKA True H1975_Epitope_Rep3 1098.50942222506 1098.50832993586 26.565 2 -0.5733414429207796 0.16494034141092964 1.0 ['ENSG00000137710|ENST00000645495|RDX', 'nc|ENSG00000137710|P35241-5|RDX', 'nc|ENSG00000137710|P35241-4|RDX', 'RDX|p.E461Kfs*3|1|0.1|ENSG00000137710|chr11:110233447-110233447|G/-|frameshift_variant', 'ENST00000532461.5_1_11:110102596-110108435:-|nuORF', 'nc|ENSG00000137710|P35241-2|RDX'] 87712 10441 QVEEARLKEAQ True NCI_RA007_Epitope_Rep2 1299.67827845531 1299.67718993586 45.205 2 -0.5734015283566751 0.16496451167421397 1.0 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1', 'ENST00000584897.5_1_18:2726458-2784452:+|nuORF', 'nc|ENSG00000101596|A6NHR9-3|SMCHD1'] 59976 10095 LHNSANVP True PC9_epitope_Rep1 850.4297153523801 850.42860993586 43.702 2 -0.5734201315580812 0.16496451167421397 1.0 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 22731 17870 ETYRYRPT True NCI_RA007_Epitope_Rep5 1084.5301576696397 1084.5290699358602 75.534 2 -0.5734705293848177 0.16496451167421397 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 119929 3395 VEYECRPGYR True NCI_RA007_Epitope_Rep2 1270.5764562390598 1270.57480490379 17.864 3 -0.5735281027438389 0.16498354338925905 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 69081 20895 LVIYITYF True PC9_epitope_Rep4 1030.57391997458 1030.57282993586 88.53 2 -0.5735594818241978 0.16498354338925905 1.0 ['chr2:142883035-142885349|132|18.84|0.23|6.38|+|1|TE_info:L1PA6,L1PA6_dup723,L1,LINE,donor,-,142882331,142883035|None,KYNU|4'] 110696 10159 TIYYADSVK True H1975_Epitope_Rep1 1058.5284263341398 1058.52732993586 44.015 2 -0.5735756739913308 0.16498354338925905 1.0 ['nc|ENSG00000211964|P01763|IGHV3-48'] 79985 18524 PIYKGYAL True PC9_epitope_Rep5 923.5116540711898 923.51054993586 76.277 2 -0.573609530177292 0.16498354338925905 1.0 ['ENST00000431775.1_1_20:1141706-1141775:+|nuORF'] 96468 12331 SEITEEQVQPD True NCI_RA007_Epitope_Rep1 1273.5673905936499 1273.5662899358601 51.936 2 -0.5736413583711795 0.16498354338925905 1.0 ['ENSG00000107036|ENST00000414202|RIC1', 'nc|ENSG00000107036|Q4ADV7-3|RIC1'] 130275 13550 VTSWNWVL True PC9_epitope_Rep6 1003.5127167003499 1003.51160993586 63.851 2 -0.5736499159494236 0.16498354338925905 1.0 ['ENSG00000196455|ENST00000356763|PIK3R4', 'PIK3R4|p.E275*|1|0.26|ENSG00000196455|chr3:130735917-130735918|-/A|frameshift_variant'] 80615 14953 PLPHPSLLS True PC9_epitope_Rep6 959.54401682863 959.54290993586 69.525 2 -0.5737658160868263 0.16498354338925905 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN'] 82097 8690 PTAEGLAAA True PC9_epitope_Rep4 799.4075829254699 799.40648993586 40.917 2 -0.573771851571577 0.16498354338925905 1.0 ['ENST00000367114.7_2_1:206785741-206785795:-|nuORF'] 106377 9753 SVSRSEIAL True PC9_epitope_Rep6 960.5240096600398 960.52290993586 47.944 2 -0.573784231079079 0.16498354338925905 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 114578 16443 TSKSFQSTV True PC9_epitope_Rep5 983.49237517859 983.49126993586 68.246 2 -0.573810434888967 0.16498354338925905 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C'] 100263 9401 SLLRENRRQQ True PC9_epitope_Rep4 1298.7167296527 1298.71562993586 43.77 2 -0.5738206184447483 0.16498354338925905 1.0 ['nc|ENSG00000174500|Q8N6F7-3|GCSAM', 'ENSG00000174500|ENST00000308910|GCSAM'] 105237 16676 STRWYRAP True PC9_epitope_Rep5 1035.5250127195497 1035.52390993586 69.147 2 -0.5738557104519829 0.16501035529083116 1.0 ['ENSG00000112144|ENST00000676107|CILK1', 'nc|ENSG00000112144|Q9UPZ9-2|CILK1', 'nc|ENSG00000080823|Q9UQ07-2|MOK', 'ENST00000518686.5_1_14:102700023-102771389:-|nuORF', 'nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK', 'nc|ENSG00000080823|Q9UQ07-5|MOK', 'nc|ENSG00000080823|Q9UQ07-6|MOK', 'ENSG00000080823|ENST00000361847|MOK'] 56828 15421 LEDAHFLL True PC9_epitope_Rep5 956.4967322830399 956.49562993586 64.326 2 -0.5738609996331713 0.16501035529083116 1.0 ['RAPSN|p.D80H|1|0.15|ENSG00000165917|chr11:47448105-47448105|C/G|missense_variant'] 96328 6058 SEEYAWVP True NCI_RA007_Epitope_Rep2 979.4287122928698 979.42760993586 28.168 2 -0.5738850651824654 0.16502376059594143 1.0 ['ENST00000376310.7_1_X:49035948-49042786:-|nuORF', 'nc|ENSG00000012211|O43900-2|PRICKLE3', 'ENSG00000012211|ENST00000599218|PRICKLE3'] 56652 5407 LEAAGDKF True NCI_RA007_Epitope_Rep5 849.42323298961 849.42212993586 27.485 2 -0.5739312113294329 0.16508532806755608 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 22890 9156 EVEWILDLK True PC9_epitope_Rep2 1143.6175756917098 1143.61594490379 40.557 3 -0.5739675122098843 0.1651228870017498 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF', 'nc|ENSG00000072121|Q68DK2-3|ZFYVE26', 'ENST00000394455.6_1_14:68196461-68236507:-|nuORF'] 84220 12604 QEVAEITKQL True NCI_RA007_Epitope_Rep2 1157.62920300457 1157.62810993586 53.64 2 -0.5739810006799827 0.1651228870017498 1.0 ['ENSG00000173991|ENST00000309889|TCAP'] 113026 10040 TPTTPPAVAP True H1975_Epitope_Rep2 950.5072969667399 950.50618993586 43.61 2 -0.5739883962373495 0.1651228870017498 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 584 8589 AARNELTEL True PC9_epitope_Rep1 1015.5298233164699 1015.52872993586 37.874 2 -0.5740046716008398 0.1651228870017498 1.0 ['ENSG00000186393|ENST00000335552|KRT26', 'CON__Q7Z3Y9'] 79579 4981 PGTRRLGSP True H1975_Epitope_Rep3 939.5250127195499 939.52390993586 24.288 2 -0.574078902828368 0.1651523421196263 1.0 ['ENST00000380877.7_1_15:50601985-50647294:-|nuORF', 'ENST00000543881.5_1_15:50596308-50647294:-|nuORF', 'ENST00000560825.5_1_15:50601982-50647300:-|nuORF', 'ENST00000558970.2_1_15:50606818-50647294:-|nuORF'] 107614 6932 TAGSFSLSVR True NCI_RA007_Epitope_Rep3 1023.53490869691 1023.53380993586 34.373 2 -0.574093152176471 0.1651817962918372 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 63720 9278 LPQSERITG True PC9_epitope_Rep5 999.53490869691 999.53380993586 40.636 2 -0.5741114109889133 0.16518989373655654 1.0 ['ENST00000299237.2_1_16:58032340-58033481:-|nuORF'] 128425 5995 VSEETVGPSHE True H1975_Epitope_Rep3 1169.52004647841 1169.51894993586 28.072 2 -0.5741135571354117 0.16518989373655654 1.0 ['ENSG00000150667|ENST00000350221|FSIP1'] 87950 7220 QVQKQWDKVEE True H1975_Epitope_Rep1 1415.7044932031497 1415.70338993586 32.782 2 -0.5741281321562405 0.16518989373655654 1.0 ['nc|ENSG00000188827|Q8IY92-2|SLX4', 'ENSG00000188827|ENST00000294008|SLX4'] 79205 18984 PGFPQIVNS True PC9_epitope_Rep6 957.4919812557699 957.49088993586 85.665 2 -0.5741720850022204 0.16523539703687057 1.0 ['ENSG00000128536|ENST00000317716|CDHR3'] 98709 14012 SIRKSSRTLKK True NCI_RA007_Epitope_Rep4 1302.80956740838 1302.80846993586 61.175 2 -0.5742526114435698 0.16523818695428866 1.0 ['ENSG00000146072|ENST00000296861|TNFRSF21'] 75151 19989 NNDMIVSIFYT True PC9_epitope_Rep5 1315.61183868827 1315.61020490379 81.941 3 -0.5742716783319353 0.16523818695428866 1.0 ['OR5T1|p.D281N|1|0.28|ENSG00000181698|chr11:56276479-56276479|G/A|missense_variant'] 98562 11007 SILVMM[Oxidation]LSL True PC9_epitope_Rep6 1021.55517613973 1021.55406993586 53.232 2 -0.5742867238183555 0.16523818695428866 1.0 ['ENST00000481463.5_1_3:195101781-195102681:-|nuORF'] 53019 24368 KRRRFVWTFWR True PC9_epitope_Rep4 1636.9215178991994 1636.92042993586 102.21 2 -0.5743004299775857 0.16523818695428866 1.0 ['ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 100516 14912 SLPPTITPPA True PC9_epitope_Rep4 992.5542471591599 992.55314993586 65.3 2 -0.5743178210170201 0.16523818695428866 1.0 ['ENSG00000078081|ENST00000265598|LAMP3'] 124751 21368 VLKKKKKKKK True PC9_epitope_Rep5 1254.92274668582 1254.9211049037901 87.252 3 -0.5743573099799713 0.16525158494502848 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 101884 13852 SPLGLAGL True H1975_Epitope_Rep2 726.42759009406 726.4270449679301 58.427 1 -0.5743920267751411 0.16526233007527244 1.0 ['nc|ENSG00000197558|A2VEC9|SSPOP', 'nc|ENSG00000197558|A2VEC9-2|SSPOP'] 101314 5830 SLYKHPQHVCL True NCI_RA007_Epitope_Rep1 1323.6757763575101 1323.67466993586 26.73 2 -0.574394603957354 0.16526233007527244 1.0 ['ENST00000281182.8_1_11:134127115-134128426:+|nuORF'] 67927 11031 LTLFCLHVFW True H1975_Epitope_Rep2 1277.66308641549 1277.6619899358602 47.46 2 -0.5744089136334354 0.16527572703344676 1.0 ['ENST00000355451.7_1_7:44425089-44425335:-|nuORF'] 95422 5315 SAKVDGVCYFR True NCI_RA007_Epitope_Rep5 1243.6019427109097 1243.6003049037902 27.137 3 -0.5744540489906496 0.1653025196597657 1.0 ['CACNA1E|p.S456C|1|0.35|ENSG00000198216|chr1:181717144-181717144|C/G|missense_variant'] 112010 11640 TLSRERPLP True PC9_epitope_Rep2 1067.60874234351 1067.60764993586 50.099 2 -0.5744593425368772 0.1653025196597657 1.0 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19757012-19757291:-|nuORF'] 108578 13445 TEIANLLKE True H1975_Epitope_Rep1 1029.57062549929 1029.57007496793 56.83 1 -0.5744812094221696 0.16531326229297727 1.0 ['ENSG00000170345|ENST00000303562|FOS', 'nc|ENSG00000170345|P01100-3|FOS', 'nc|ENSG00000170345|P01100-2|FOS'] 96932 16052 SETYWIYICI True H1975_Epitope_Rep2 1289.6002113754098 1289.59910993586 66.946 2 -0.5745273193480814 0.16531326229297727 1.0 ['ENST00000361727.7_1_7:148113442-148113583:+|nuORF'] 65804 16005 LSKARRRSRPR True PC9_epitope_Rep2 1381.8490812349298 1381.8474449037901 66.819 3 -0.5745365515037861 0.16533739870015246 1.0 ['ENST00000395094.3_1_16:30543822-30545758:-|nuORF', 'ENST00000252799.3_1_16:30543822-30545758:-|nuORF', 'nc|ENSG00000169955|Q9BV97|ZNF747', 'ENSG00000169955|ENST00000693075|ZNF747'] 70671 4711 M[Oxidation]DC[Carbamidomethyl]QEC[Carbamidomethyl]PEGYR True NCI_RA007_Epitope_Rep2 1459.5166359967297 1459.51552993586 22.952 2 -0.5745767803479723 0.16533739870015246 1.0 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 96093 7878 SEDLSAYASI True H1975_Epitope_Rep1 1054.48187006454 1054.48076993586 35.253 2 -0.5746401334665495 0.16533739870015246 1.0 ['ENSG00000169047|ENST00000305123|IRS1'] 23019 5892 EVKDVQLHLER True H1975_Epitope_Rep3 1364.7412130650398 1364.7395549037901 27.673 3 -0.5747195949729361 0.16539362623960974 1.0 ['nc|ENSG00000120656|Q16514-2|TAF12', 'ENST00000471683.5_1_1:28916264-28944539:-|nuORF', 'ENSG00000120656|ENST00000373824|TAF12'] 85470 8609 QLHFYRFYLEF True PC9_epitope_Rep1 1561.7717849173298 1561.7701349037898 37.95 3 -0.5747525707001276 0.16539362623960974 1.0 ['ENSG00000005189|ENST00000261377|REXO5', 'nc|ENSG00000005189|Q96IC2-2|REXO5', 'ENST00000567297.5_1_16:20818275-20837201:+|nuORF'] 128224 25106 VRVLRPLKA True PC9_epitope_Rep3 1050.7025831586998 1050.70148993586 101.92 2 -0.5747764046241364 0.16539362623960974 1.0 ['nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I', 'CACNA1I|p.R750Afs*121|1|0.21|ENSG00000100346|chr22:39659031-39659032|-/G|frameshift_variant', 'CACNA1I|p.R935Dfs*23|1|0.3|ENSG00000100346|chr22:39661207-39661207|C/-|frameshift_variant'] 348 11310 AAKECLQWDP True H1975_Epitope_Rep2 1159.5331944447498 1159.53208993586 48.551 2 -0.5748642907592227 0.16541522269285072 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 80814 14196 PLTHAQDL True PC9_epitope_Rep1 893.46068112749 893.45958993586 59.427 2 -0.5748645837241853 0.16541522269285072 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 97238 20466 SFLTFAPSVL True PC9_epitope_Rep1 1080.58554728744 1080.5844499358602 83.534 2 -0.5748727261407088 0.16541522269285072 1.0 ['ENSG00000106038|ENST00000496902|EVX1', 'nc|ENSG00000106038|P49640-2|EVX1'] 111460 18710 TLLDNWKP True PC9_epitope_Rep1 985.5232813840499 985.52218993586 76.757 2 -0.5749420769162097 0.16541522269285072 1.0 ['NOX4|p.D448N|1|0.51|ENSG00000086991|chr11:89340167-89340167|C/T|missense_variant'] 63942 16475 LPYGKLVQI True PC9_epitope_Rep3 1029.62226714933 1029.62116993586 68.509 2 -0.5749448641247064 0.16541522269285072 1.0 ['ENST00000542055.5_1_12:7507622-7507685:-|nuORF'] 80422 12143 PLKEEEYRKLR True PC9_epitope_Rep6 1459.8147123584697 1459.81360993586 58.059 2 -0.5749868317378777 0.16541522269285072 1.0 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 79399 16829 PGLRVLVL True PC9_epitope_Rep4 865.5749230340899 865.57382993586 72.71 2 -0.5750111288313138 0.16541522269285072 1.0 ['ENST00000269397.8_2_17:77807391-77807700:-|nuORF'] 58614 22469 LFFIRESTL True PC9_epitope_Rep5 1124.62299542532 1124.62188993586 91.429 2 -0.5750379533107409 0.16541522269285072 1.0 ['ENST00000399070.3_2_18:32886564-32887857:+|nuORF'] 128613 9141 VSKTHAVI True PC9_epitope_Rep1 853.5021520166499 853.50104993586 40.011 2 -0.5750438555262779 0.16541522269285072 1.0 ['ENSG00000141295|ENST00000290216|SCRN2', 'ENST00000581546.1_1_17:45917528-45917771:-|nuORF', 'ENST00000578840.5_1_17:45917528-45918556:-|nuORF', 'ENST00000580428.1_1_17:45917528-45918633:-|nuORF', 'nc|ENSG00000141295|Q96FV2-2|SCRN2'] 58171 8282 LESKENTPP True H1975_Epitope_Rep1 1013.50293986229 1013.50184993586 36.79 2 -0.5750893000164509 0.16541522269285072 1.0 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 99900 13024 SLHTTTNV True PC9_epitope_Rep3 871.4399456829101 871.43884993586 55.125 2 -0.5751017797606565 0.16542861268430425 1.0 ['ENSG00000127124|ENST00000372583|HIVEP3', 'nc|ENSG00000127124|Q5T1R4-2|HIVEP3'] 47055 9086 IVTEKSTVP True H1975_Epitope_Rep3 972.54916177872 972.54806993586 39.937 2 -0.5752105926479465 0.16545804588480667 1.0 ['ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-3|UGDH'] 69370 15183 LVQDTGLTI True PC9_epitope_Rep4 958.53351171458 958.5329649679301 66.326 1 -0.5752481861178729 0.16547143475958992 1.0 ['nc|ENSG00000188013|A8K0S8|MEIS3P2'] 136825 2744 YITREDQYSK True H1975_Epitope_Rep1 1301.62518025329 1301.62354490379 14.102 3 -0.57533693082714 0.16549555619725992 1.0 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF'] 124610 7373 VLHNTCTRK True NCI_RA007_Epitope_Rep2 1070.56549763254 1070.56440993586 33.304 2 -0.575344651823524 0.16549555619725992 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'PLXNA4|p.N1124Kfs*22|1|0.2|ENSG00000221866|chr7:132181501-132181502|-/T|frameshift_variant', 'PLXNA4|p.E1295Sfs*9|1|0.19|ENSG00000221866|chr7:132174913-132174913|G/-|frameshift_variant'] 98685 5301 SIQRISSVEGR True NCI_RA007_Epitope_Rep1 1230.66804812478 1230.66640490379 24.701 3 -0.5753482240534087 0.16549555619725992 1.0 ['OR13F1|p.L226Q|2|0.26|ENSG00000186881|chr9:104504939-104504939|T/A|missense_variant'] 93472 13521 RSFVTFGG True PC9_epitope_Rep5 869.4395517600899 869.43844993586 57.03 2 -0.5754316590882881 0.16550894361113339 1.0 ['PLXNA4|p.R44G|1|0.21|ENSG00000221866|chr7:132508564-132508564|G/C|missense_variant'] 100388 18520 SLNPLIYCL True PC9_epitope_Rep5 1034.5470536037399 1034.54594993586 76.262 2 -0.5755680724403063 0.1655330616959158 1.0 ['OR6B1|p.F286L|1|0.29|ENSG00000221813|chr7:144004854-144004854|C/A|missense_variant'] 37827 4971 HDGWPMICLEK True NCI_RA007_Epitope_Rep2 1327.6053138391896 1327.6042099358601 23.958 2 -0.5756116048374527 0.1655330616959158 1.0 ['ENST00000450600.1_1_7:56296937-56297204:-|nuORF', 'nc|ENSG00000107443|Q5T5M9-2|CCNJ', 'nc|ENSG00000107443|Q5T5M9|CCNJ', 'ENSG00000107443|ENST00000465148|CCNJ'] 12731 13029 DLGGTEILAP True H1975_Epitope_Rep3 984.5127762699999 984.51166993586 55.354 2 -0.5756183749322346 0.1655330616959158 1.0 ['ENSG00000110002|ENST00000456829|VWA5A', 'nc|ENSG00000110002|O00534-3|VWA5A', 'nc|ENSG00000110002|O00534-2|VWA5A'] 101490 7523 SNVDKVQESRN True NCI_RA007_Epitope_Rep1 1274.6214918551798 1274.6203899358602 33.255 2 -0.5756414607286714 0.1655464476491442 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 3175 7520 AGEGPSCIL True PC9_epitope_Rep1 845.3953039896099 845.39420993586 33.744 2 -0.5757597830613775 0.16559191530317613 1.0 ['ACAN|p.G1960C|1|0.09|ENSG00000157766|chr15:88858463-88858463|G/T|missense_variant'] 70199 20482 LYLPQEMSAV True NCI_RA007_Epitope_Rep4 1149.57399662757 1149.57347496793 88.695 1 -0.5758122535028622 0.1656052998829021 1.0 ['ENSG00000111647|ENST00000279907|BLTP3B', 'nc|ENSG00000111647|A0JNW5-2|BLTP3B'] 119957 15387 VEYQHNLF True PC9_epitope_Rep6 1048.4977949121999 1048.49668993586 71.334 2 -0.5758630094709118 0.16563472458374773 1.0 ['ENST00000249861.8_1_15:71174569-71174695:-|nuORF'] 41496 11467 ICNLPNNSL True PC9_epitope_Rep5 986.4855159763401 986.48440993586 49.105 2 -0.5759041316788399 0.16565883390809208 1.0 ['ENSG00000204021|ENST00000404190|LIPK'] 90190 18627 RHIEAKKLEK True NCI_RA007_Epitope_Rep3 1250.7459045226599 1250.74480993586 81.501 2 -0.5759607582585667 0.16565883390809208 1.0 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN'] 106319 5073 SVRTASPDP True H1975_Epitope_Rep2 928.4614094034798 928.46030993586 24.595 2 -0.5759853857577077 0.16565883390809208 1.0 ['ENSG00000173402|ENST00000308775|DAG1'] 114786 11743 TTAPPTWGIP True H1975_Epitope_Rep3 1039.53384606775 1039.53274993586 50.312 2 -0.5759999160888675 0.16566955908062939 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant'] 42505 12621 IERLGIWLF True PC9_epitope_Rep2 1145.6597152872098 1145.65807490379 53.857 3 -0.5760090146602584 0.16566955908062939 1.0 ['ENST00000343455.7_1_14:95562307-95562397:-|nuORF'] 19268 16569 ELLLFEVAWE True PC9_epitope_Rep3 1247.64379043955 1247.64268993586 68.872 2 -0.5761663965300398 0.16568028356509326 1.0 ['ENSG00000111713|ENST00000261195|GYS2', 'GYS2|p.S526Vfs*2|1|0.18|ENSG00000111713|chr12:21542566-21542566|G/-|frameshift_variant'] 88180 14047 QWVHFRQAL True PC9_epitope_Rep1 1183.62506111399 1183.62340490379 58.869 3 -0.5762013323252768 0.16568028356509326 1.0 ['ENST00000278968.10_3_11:117070126-117070369:+|nuORF'] 67550 11229 LTEQPLEGL True H1975_Epitope_Rep2 998.5284263341398 998.5273299358599 48.234 2 -0.5762878823566386 0.16569366479550923 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-2|DMD', 'nc|ENSG00000198947|P11532-17|DMD', 'nc|ENSG00000198947|P11532-13|DMD', 'nc|ENSG00000198947|P11532-16|DMD', 'nc|ENSG00000198947|P11532-12|DMD', 'nc|ENSG00000198947|P11532-15|DMD', 'nc|ENSG00000198947|P11532-14|DMD'] 117943 12957 VARHCLERTE True NCI_RA007_Epitope_Rep3 1212.60333969324 1212.60169490379 58.24 3 -0.5763747678934062 0.16573380591150386 1.0 ['ENST00000284110.1_1_17:13504854-13504956:-|nuORF'] 89770 12118 RFDCVLKLVHH True PC9_epitope_Rep6 1365.73395993997 1365.7323149037902 57.956 3 -0.5763818461273716 0.16573380591150386 1.0 ['ENSG00000184557|ENST00000330871|SOCS3'] 80463 21044 PLLAALLQ True PC9_epitope_Rep5 837.5323895157701 837.53128993586 86.005 2 -0.5764125180700125 0.16573380591150386 1.0 ['ENSG00000170558|ENST00000269141|CDH2'] 68358 10777 LTSLQTLKLS True NCI_RA007_Epitope_Rep1 1102.65977485686 1102.6586699358602 45.915 2 -0.5764377718864536 0.16573389566862842 1.0 ['ENSG00000178772|ENST00000323830|CPN2'] 5737 5222 APDEKYVAA True PC9_epitope_Rep2 962.4709114580199 962.46980993586 25.476 2 -0.5764427666354888 0.16573389566862842 1.0 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 15886 6667 EDPPGEEDLPG True NCI_RA007_Epitope_Rep2 1153.47751296009 1153.47586490379 30.545 3 -0.5764572310440744 0.16573389566862842 1.0 ['ENSG00000107159|ENST00000378357|CA9'] 9318 7209 AVSHSEFWHR True PC9_epitope_Rep5 1254.5894038812598 1254.58774490379 32.694 3 -0.5764881979099751 0.16573389566862842 1.0 ['nc|ENSG00000160058|Q9NW68-9|BSDC1', 'nc|ENSG00000160058|Q9NW68-4|BSDC1', 'nc|ENSG00000160058|Q9NW68-8|BSDC1', 'nc|ENSG00000160058|Q9NW68-2|BSDC1', 'ENSG00000160058|ENST00000455895|BSDC1', 'nc|ENSG00000160058|Q9NW68-7|BSDC1', 'nc|ENSG00000160058|Q9NW68-3|BSDC1'] 77158 13208 NYENKQYLF True PC9_epitope_Rep6 1217.57168812845 1217.5705899358602 62.454 2 -0.5765011726683458 0.16573389566862842 1.0 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 12078 10193 DIERYSKRYMK True H1975_Epitope_Rep1 1487.75548323019 1487.7543899358602 44.147 2 -0.5765230573236649 0.16573389566862842 1.0 ['ENSG00000113356|ENST00000651687|POLR3G'] 88311 8898 QYLEKQQEL True NCI_RA007_Epitope_Rep5 1177.5979028762897 1177.5968099358602 40.889 2 -0.5765916037204739 0.16573407513107052 1.0 ['ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1'] 113951 3275 TRKDKEESKKK True PC9_epitope_Rep4 1375.7783268497494 1375.77667490379 18.554 3 -0.5766009602892957 0.16573407513107052 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 83846 23246 QEGDVNFNLI True H1975_Epitope_Rep3 1147.55095268387 1147.54984993586 97.055 2 -0.5766021679728557 0.16573407513107052 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 68631 16333 LVAFLQQVL True PC9_epitope_Rep1 1029.62226714933 1029.62116993586 67.643 2 -0.576625841634337 0.16573407513107052 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 140573 8708 YYLRSRQRRQP True NCI_RA007_Epitope_Rep1 1521.8276770840098 1521.82603490379 37.875 3 -0.5766477264807169 0.16573407513107052 1.0 ['nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1', 'ENSG00000143337|ENST00000606911|TOR1AIP1', 'nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1', 'TOR1AIP1|p.R178Qfs*10|1|0.24|ENSG00000143337|chr1:179884746-179884747|-/G|frameshift_variant'] 58802 8266 LFQEREHVLRL True NCI_RA007_Epitope_Rep3 1438.80448202794 1438.80283490379 39.64 3 -0.5766598860777999 0.16573407513107052 1.0 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF', 'ENST00000538160.1_1_12:514707-527878:+|nuORF'] 82285 16336 PTPFCWVQP True PC9_epitope_Rep3 1073.5004377644898 1073.4993499358602 67.971 2 -0.5766791650699772 0.16573407513107052 1.0 ['ENST00000539777.5_1_1:168105623-168105902:-|nuORF'] 56738 12235 LEALNTLSEAK True H1975_Epitope_Rep1 1187.63976768827 1187.6386699358602 52.083 2 -0.5767628320334076 0.16573407513107052 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 57377 13248 LEHLKPTYWFS True H1975_Epitope_Rep1 1419.7186867153098 1419.7175899358601 56.055 2 -0.5767690118403642 0.16573407513107052 1.0 ['ENSG00000138231|ENST00000260803|DBR1'] 128709 11196 VSPAVGNQVD True PC9_epitope_Rep3 984.4876241513199 984.48652993586 48.07 2 -0.5767856788101651 0.16573407513107052 1.0 ['ENST00000403096.7_1_2:3653453-3653594:+|nuORF'] 38156 14923 HERFRIVSWK True NCI_RA007_Epitope_Rep2 1356.74148784856 1356.74038993586 62.726 2 -0.5767972097250733 0.16573407513107052 1.0 ['UBE2Q2-FBXO22|5|fusion', 'UBE2Q2-FBXO22|3|fusion', 'UBE2Q2-FBXO22|6|fusion', 'UBE2Q2-FBXO22|4|fusion', 'nc|ENSG00000140367|Q8WVN8-2|UBE2Q2', 'nc|ENSG00000140367|Q8WVN8-4|UBE2Q2', 'ENSG00000140367|ENST00000267938|UBE2Q2'] 40936 15728 HVYFFFREVSV True PC9_epitope_Rep4 1428.71902106848 1428.7173749037902 68.423 3 -0.5768038394428279 0.16573407513107052 1.0 ['nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C'] 139194 8354 YSTGLNSAY True NCI_RA007_Epitope_Rep1 974.4345259493 974.43397496793 36.496 1 -0.5768134504687505 0.1657447934202299 1.0 68604 15921 LTYRMTKRRDR True H1975_Epitope_Rep1 1494.8201491754198 1494.8190499358602 66.551 2 -0.5768620627687956 0.1657447934202299 1.0 ['ENST00000446662.5_1_16:22466144-22470768:+|nuORF'] 10547 11331 CPRPGGCL True PC9_epitope_Rep3 801.3625643926899 801.36146993586 48.59 2 -0.5769771985872195 0.16580626543110913 1.0 ['ENST00000519604.5_1_20:61920746-61920884:+|nuORF'] 133638 24636 WKKKSLIQKLI True NCI_RA007_Epitope_Rep1 1383.8965915076299 1383.89494490379 102.03 3 -0.5769930387011043 0.16581432258685092 1.0 ['ENSG00000105877|ENST00000409508|DNAH11'] 39414 9817 HLYWDDLKR True H1975_Epitope_Rep3 1244.6302060640799 1244.62855490379 42.788 3 -0.5769980819115552 0.16581432258685092 1.0 ['TFRC|p.R121H|1|0.62|ENSG00000072274|chr3:196074002-196074002|C/T|missense_variant'] 89942 19742 RFWKLILLTWL True NCI_RA007_Epitope_Rep3 1487.9016768880697 1487.9005699358602 86.063 2 -0.5770027281520237 0.16581432258685092 1.0 ['ENST00000465952.5_1_13:31205167-31205455:+|nuORF'] 127132 14872 VQDLENYIL True H1975_Epitope_Rep2 1105.5655401188499 1105.56444993586 62.357 2 -0.5770096606209268 0.1658250372721589 1.0 ['ENST00000554265.5_1_14:35568434-35579030:-|nuORF'] 78478 11772 PDDLVAPVV True H1975_Epitope_Rep3 923.4963979298699 923.4958449679301 50.425 1 -0.5770227494855935 0.1658250372721589 1.0 ['ENSG00000136875|ENST00000374198|PRPF4', 'nc|ENSG00000136875|O43172|PRPF4'] 8542 6808 ATYLWRKSFKW True H1975_Epitope_Rep1 1484.79285471508 1484.79121490379 31.231 3 -0.577157214202715 0.1658678123146471 1.0 ['ENST00000466650.5_1_3:182788929-182817286:-|nuORF'] 92475 8431 RRAALDHS True H1975_Epitope_Rep3 924.488961564 924.48786993586 37.414 2 -0.5771679267296469 0.1658678123146471 1.0 ['UBAP1-KIF24|4|fusion', 'nc|ENSG00000186638|Q5T7B8-4|KIF24', 'nc|ENSG00000186638|Q5T7B8-2|KIF24', 'UBAP1-KIF24|1|fusion', 'UBAP1-KIF24|2|fusion', 'ENSG00000186638|ENST00000402558|KIF24', 'UBAP1-KIF24|3|fusion'] 56457 11686 LDSSGVAFAV True H1975_Epitope_Rep2 964.48656152216 964.48546993586 50.023 2 -0.5771877492909503 0.16588118367477797 1.0 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 99246 6789 SLCSREVP True PC9_epitope_Rep1 889.43275212749 889.43164993586 30.919 2 -0.577261768831022 0.16591058461439814 1.0 ['nc|ENSG00000153820|Q2M3C7-2|SPHKAP', 'ENSG00000153820|ENST00000392056|SPHKAP'] 33110 6757 GKKSGFVN True NCI_RA007_Epitope_Rep3 835.45520182423 835.45410993586 33.668 2 -0.577286236408765 0.16593732467740643 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 93314 10349 RRSARWPWPER True H1975_Epitope_Rep1 1495.7908976524698 1495.78924490379 44.755 3 -0.5773104903804169 0.16593732467740643 1.0 ['HTR1A|p.V295Cfs*50|2|0.23|ENSG00000178394|chr5:63960837-63960837|C/-|frameshift_variant'] 133550 5866 WHREKRRQRNK True H1975_Epitope_Rep1 1592.8872576487995 1592.88562490379 27.633 3 -0.5773903318210128 0.16597743155735079 1.0 ['ENSG00000153993|ENST00000284136|SEMA3D'] 29807 9519 FVTQFTTQFL True NCI_RA007_Epitope_Rep3 1230.6284747285797 1230.62683490379 44.536 3 -0.5774115418066031 0.16597743155735079 1.0 ['ENSG00000204478|ENST00000602960|PRAMEF20'] 37045 16867 GVSDVDYSL True PC9_epitope_Rep4 953.43419159613 953.43308993586 72.859 2 -0.5774240804671237 0.16597743155735079 1.0 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 66544 7962 LSSHLTEGP True NCI_RA007_Epitope_Rep4 939.4661604307499 939.46506993586 37.377 2 -0.5774995238345256 0.1660068281267531 1.0 ['ENSG00000168101|ENST00000304301|NUDT16L1', 'nc|ENSG00000168101|Q9BRJ7-2|NUDT16L1'] 143 19950 AADGTIFLVP True PC9_epitope_Rep5 1002.5385970950199 1002.53750993586 81.79 2 -0.5775077439489409 0.16604959048580725 1.0 ['ENSG00000123405|ENST00000435572|NFE2'] 39550 15175 HPGFRQRCR True PC9_epitope_Rep5 1155.5832133853498 1155.58156490379 63.379 3 -0.5775164817298238 0.16604959048580725 1.0 ['CD276|p.D84Pfs*82|1|0.1|ENSG00000103855|chr15:73702420-73702442|GCCAGGACCAGGGCAGCGCCTAT/-|frameshift_variant'] 55629 9519 LDACLSTVTVP True NCI_RA007_Epitope_Rep1 1117.56891124713 1117.5678099358602 41.022 2 -0.5776140292472893 0.16606295678933197 1.0 ['OR10S1|p.C255Afs*39|1|0.2|ENSG00000196248|chr11:123976930-123976930|G/-|frameshift_variant', 'ENSG00000196248|ENST00000641123|OR10S1', 'nc|ENSG00000196248|Q8NGN2|OR10S1'] 125137 16961 VLPRNLAL True PC9_epitope_Rep3 894.5650866263799 894.56398993586 70.402 2 -0.5776524688842647 0.16609235010337697 1.0 ['ENSG00000188676|ENST00000502986|IDO2', 'nc|ENSG00000188676|Q6ZQW0-2|IDO2'] 42714 9988 IEYLYRRG True PC9_epitope_Rep5 1068.5716285587998 1068.5705299358601 43.394 2 -0.5776977764776422 0.16610305312925716 1.0 ['ENSG00000205138|ENST00000378887|SDHAF1'] 95146 9273 SAAAARVEEAE True PC9_epitope_Rep4 1102.5254662120199 1102.52436993586 43.272 2 -0.5777144864720481 0.16610305312925716 1.0 ['ENST00000522751.5_1_17:78389368-78389413:+|nuORF'] 17990 11382 EIGWDSEALV True PC9_epitope_Rep1 1117.52915461013 1117.52804993586 48.661 2 -0.5777674367521555 0.16611641771908456 1.0 ['nc|ENSG00000164556|Q6ZVS7|CFAP144P1'] 111123 16415 TLENKEVI True PC9_epitope_Rep1 944.51786165044 944.51676993586 67.963 2 -0.577813380454867 0.16612179487179488 1.0 ['ENST00000316660.6_1_18:57570124-57570343:+|nuORF'] 65776 19338 LSINFAKVL True PC9_epitope_Rep1 1003.6066170851899 1003.60552993586 79.19 2 -0.5778321045452378 0.16612179487179488 1.0 ['nc|ENSG00000133835|P51659-3|HSD17B4', 'ENSG00000133835|ENST00000510025|HSD17B4', 'nc|ENSG00000133835|P51659-2|HSD17B4', 'ENST00000515235.6_1_5:118829562-118961685:+|nuORF'] 40494 11517 HSEVETDSKKK True NCI_RA007_Epitope_Rep2 1286.64664397386 1286.6455499358601 49.389 2 -0.5778347455294008 0.16612179487179488 1.0 ['ENSG00000145220|ENST00000343470|LYAR'] 83029 23085 PYLALLTIP True PC9_epitope_Rep3 999.60046907559 999.59936993586 94.064 2 -0.5778375222291761 0.16612179487179488 1.0 ['ENSG00000152942|ENST00000354868|RAD17', 'nc|ENSG00000152942|O75943|RAD17', 'nc|ENSG00000152942|O75943-4|RAD17', 'nc|ENSG00000152942|O75943-3|RAD17'] 15585 8844 EATLSWQQTCP True PC9_epitope_Rep1 1262.56013746858 1262.55904993586 38.86 2 -0.5778745383219441 0.166148520880741 1.0 ['ENSG00000121270|ENST00000356608|ABCC11', 'nc|ENSG00000121270|Q96J66-2|ABCC11', 'ENST00000567385.5_1_16:48244807-48265838:-|nuORF'] 26837 12109 FLEPGRRGL True H1975_Epitope_Rep3 1043.58761297611 1043.58650993586 51.742 2 -0.577907809613022 0.166148520880741 1.0 ['ENSG00000176020|ENST00000320431|AMIGO3'] 110911 16798 TLAQLESLEI True PC9_epitope_Rep5 1115.60740493083 1115.60630993586 69.622 2 -0.5779421468013567 0.16616188324279282 1.0 ['nc|ENSG00000230561|P0DO97|CCDC192', 'ENSG00000230561|ENST00000514853|CCDC192'] 10976 4856 DC[Carbamidomethyl]QEC[Carbamidomethyl]PEGYR True NCI_RA007_Epitope_Rep2 1312.4812360837398 1312.48012993586 23.512 2 -0.5779730840305674 0.16618860668215688 1.0 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 134806 12165 WYQTKFETL True NCI_RA007_Epitope_Rep4 1214.5971746002997 1214.5960699358602 53.792 2 -0.5780043209425149 0.16618860668215688 1.0 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'CON__Q9DCV7', 'ENST00000552183.1_1_12:52635324-52638266:+|nuORF', 'ENST00000551130.1_1_12:52635330-52637101:+|nuORF'] 64852 19850 LSANITGF True H1975_Epitope_Rep1 821.42831837005 821.4277649679301 82.604 1 -0.5782072545929915 0.16628208826074417 1.0 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 95555 11837 SASDVFEHL True NCI_RA007_Epitope_Rep5 1003.46107505031 1003.45996993586 52.188 2 -0.5782206636748383 0.1663061417423769 1.0 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF', 'ENST00000484926.1_1_2:202050494-202050848:+|nuORF'] 5888 7078 APGSDTPLPA True PC9_epitope_Rep2 924.4552613938799 924.45416993586 32.623 2 -0.5782228464777337 0.1663061417423769 1.0 ['ENST00000562955.2_2_1:43919018-43919642:+|nuORF'] 13833 4976 DQYFTRWYKAD True NCI_RA007_Epitope_Rep1 1491.67827845531 1491.67663490379 23.437 3 -0.5782277796081108 0.1663061417423769 1.0 ['ENST00000510179.1_1_13:46844256-46844595:+|nuORF'] 27213 13163 FLTTQDIP True H1975_Epitope_Rep2 933.4807478657299 933.4801949679301 55.756 1 -0.578272278016217 0.16633285798977746 1.0 ['ENST00000319264.3_1_9:12775113-12775212:+|nuORF'] 21987 7622 ESMDPEVPG True H1975_Epitope_Rep2 959.3906125319899 959.38950993586 34.271 2 -0.5782935005979141 0.16633285798977746 1.0 ['ENST00000424235.1_1_20:37059633-37059732:-|nuORF', 'ENST00000436764.5_1_20:37055081-37059732:-|nuORF', 'ENST00000414142.5_1_20:37055081-37059732:-|nuORF'] 119157 4611 VEISADGLPSP True H1975_Epitope_Rep2 1083.54480467427 1083.54370993586 22.839 2 -0.5783442821226504 0.16639428315067614 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1'] 58314 10524 LETQKLDLMT True PC9_epitope_Rep1 1190.6216750959798 1190.6205699358602 45.371 2 -0.5784009370758159 0.16646372724942324 1.0 ['ENST00000530189.1_1_11:7618841-7631707:+|nuORF', 'ENST00000532926.5_1_11:7598800-7674592:+|nuORF', 'nc|ENSG00000166387|Q8ND30-2|PPFIBP2', 'ENSG00000166387|ENST00000299492|PPFIBP2', 'nc|ENSG00000166387|Q8ND30-3|PPFIBP2'] 62421 11638 LLSCAPPP True PC9_epitope_Rep1 796.4153111582 796.41420993586 49.645 2 -0.5784194473077939 0.16646372724942324 1.0 ['SLC23A2|p.R403L|1|0.46|ENSG00000089057|chr20:4869948-4869948|C/A|missense_variant'] 115186 5512 TVARSPVAP True PC9_epitope_Rep4 896.5079656730799 896.50686993586 27.962 2 -0.5784205302711134 0.16646372724942324 1.0 ['ENSG00000197063|ENST00000357736|MAFG'] 135910 6941 YETLKNWWLQQ True NCI_RA007_Epitope_Rep1 1507.74596409231 1507.7443049037902 31.003 3 -0.5784315859243145 0.16646372724942324 1.0 ['nc|ENSG00000125648|Q9BV35-4|SLC25A23', 'nc|ENSG00000125648|Q9BV35-2|SLC25A23', 'ENSG00000125648|ENST00000301454|SLC25A23', 'nc|ENSG00000125648|Q9BV35-3|SLC25A23'] 140452 3368 YYGDHGYGCCG True PC9_epitope_Rep2 1193.3906296153298 1193.38897490379 18.224 3 -0.5784604253153989 0.16647708156431743 1.0 ['KRTAP6-2|p.G7_Y9del|1|0.19|ENSG00000186930|chr21:30598848-30598856|GTAGTTTCC/-|inframe_deletion', 'ENSG00000186930|ENST00000334897|KRTAP6-2'] 57985 9271 LEQTDIQGA True H1975_Epitope_Rep1 973.4716397340097 973.47054993586 40.573 2 -0.5785008656996679 0.1665064564708898 1.0 ['ENSG00000198730|ENST00000361367|CTR9'] 117412 13019 VADLVAKL True PC9_epitope_Rep6 827.5116540711899 827.51054993586 61.658 2 -0.5785446508312442 0.16651180673480503 1.0 ['ENST00000433214.2_1_10:88753296-88760106:+|nuORF'] 19643 13262 ELRRRWHRWRL True H1975_Epitope_Rep1 1662.9443786020997 1662.94328993586 56.111 2 -0.578612052975171 0.16651180673480503 1.0 ['ENSG00000215644|ENST00000400723|GCGR'] 32530 5695 GGSAGAPPLGP True PC9_epitope_Rep2 879.4450310633499 879.44392993586 27.292 2 -0.5786386542227329 0.16651180673480503 1.0 ['ENSG00000169676|ENST00000304374|DRD5'] 44718 11665 IPQDALPP True H1975_Epitope_Rep3 849.45961849833 849.45852993586 50.004 2 -0.5786441703496686 0.16651180673480503 1.0 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 137938 21573 YPSRRHSTF True PC9_epitope_Rep5 1149.5679401606901 1149.56684993586 88.02 2 -0.57880545002192 0.16651448892306214 1.0 ['ENSG00000095203|ENST00000374566|EPB41L4B', 'nc|ENSG00000095203|Q9H329-2|EPB41L4B'] 126286 19474 VPHNPYATL True PC9_epitope_Rep2 1010.51853035678 1010.51742993586 80.286 2 -0.5788343559743975 0.16651448892306214 1.0 ['RBM38-FRMD4B|1|fusion', 'nc|ENSG00000114541|Q9Y2L6-2|FRMD4B', 'FRMD4B|p.F1023Lfs*3|1|0.27|ENSG00000114541|chr3:69171896-69171897|AA/-|frameshift_variant', 'ENSG00000114541|ENST00000398540|FRMD4B'] 80841 17589 PLTTTPRRRP True H1975_Epitope_Rep2 1193.69928868341 1193.69818993586 72.97 2 -0.5789041135553753 0.16651448892306214 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 63712 8271 LPQPPPLLSP True H1975_Epitope_Rep3 1057.61718176889 1057.6160899358601 36.796 2 -0.578914143709522 0.16651448892306214 1.0 ['ENST00000466827.1_1_1:877519-877869:+|nuORF', 'nc|ENSG00000187634|Q96NU1-1|SAMD11', 'nc|ENSG00000187634|Q96NU1-2|SAMD11', 'nc|ENSG00000187634|Q96NU1-6|SAMD11', 'nc|ENSG00000187634|Q96NU1-4|SAMD11', 'nc|ENSG00000187634|Q96NU1|SAMD11', 'nc|ENSG00000187634|Q96NU1-5|SAMD11', 'ENSG00000187634|ENST00000616016|SAMD11'] 131123 12699 VVPAALKVV True PC9_epitope_Rep6 894.59023874506 894.58914993586 60.323 2 -0.5789500270645684 0.16651448892306214 1.0 ['ENSG00000142541|ENST00000391857|RPL13A', 'nc|ENSG00000293056|Q6NVV1|RPL13AP3', 'ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 124655 9789 VLIGYWRL True PC9_epitope_Rep2 1018.59638675466 1018.59528993586 42.99 2 -0.5789656928833727 0.16652784007176266 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|452|3|anti-sense'] 46297 13159 ITELRVQKL True PC9_epitope_Rep6 1098.67609362734 1098.6749899358601 62.258 2 -0.5790061877307233 0.16653852314592343 1.0 ['ENSG00000155659|ENST00000374737|VSIG4', 'nc|ENSG00000155659|Q9Y279-2|VSIG4'] 3133 12301 AGDLSAGF True PC9_epitope_Rep5 736.3391690124799 736.3386249679301 52.306 1 -0.5790114459062825 0.16653852314592343 1.0 ['ENSG00000055332|ENST00000233057|EIF2AK2', 'nc|ENSG00000055332|P19525-2|EIF2AK2'] 134187 24622 WRLRLCIFL True PC9_epitope_Rep4 1218.70595428698 1218.70484993586 103.2 2 -0.5790299410209796 0.16656789095161056 1.0 ['ENSG00000188394|ENST00000616002|GPR21'] 63830 5558 LPTEDPTMER True H1975_Epitope_Rep2 1187.54923843171 1187.54758490379 26.387 3 -0.5791725742889753 0.1666132752434649 1.0 ['NEDD4L|p.Q316Hfs*58|1|0.16|ENSG00000049759|chr18:58330867-58330868|-/TTCA|frameshift_variant', 'nc|ENSG00000049759|Q96PU5-3|NEDD4L', 'nc|ENSG00000049759|Q96PU5-2|NEDD4L', 'nc|ENSG00000049759|Q96PU5-6|NEDD4L', 'nc|ENSG00000049759|Q96PU5-5|NEDD4L', 'nc|ENSG00000049759|Q96PU5-7|NEDD4L', 'ENSG00000049759|ENST00000400345|NEDD4L'] 124750 9958 VLKKKKKKKK True PC9_epitope_Rep5 1254.92274668582 1254.9211049037901 43.279 3 -0.5791878290132184 0.16662662374065 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 92606 20270 RREEWKPYWMR True NCI_RA007_Epitope_Rep2 1635.8092501385497 1635.80814993586 83.877 2 -0.579262225928346 0.16667200563795367 1.0 ['ENST00000499685.2_1_12:92539993-92577930:+|nuORF'] 78781 22372 PEKPYACDICH True PC9_epitope_Rep3 1274.54237922946 1274.54128993586 91.333 2 -0.5793037496195406 0.1666986994682555 1.0 ['ENSG00000173276|ENST00000310826|ZBTB21'] 128481 20169 VSFDVFNCQF True PC9_epitope_Rep4 1204.5222954078797 1204.52118993586 85.717 2 -0.5793052513922385 0.1666986994682555 1.0 ['ENST00000431461.1_1_6:110522811-110530492:+|nuORF'] 13412 7420 DNLQKIIKLNE True NCI_RA007_Epitope_Rep1 1326.7507151195798 1326.7490549037902 32.858 3 -0.5793490838481595 0.16672806188638148 1.0 ['ENSG00000170160|ENST00000399273|CCDC144A', 'nc|ENSG00000266302|A2RUR9|CCDC144A', 'nc|ENSG00000266302|A2RUR9-3|CCDC144A', 'nc|ENSG00000266302|A2RUR9-2|CCDC144A', 'ENST00000470068.2_1_17:16635099-16667555:+|nuORF', 'ENST00000328495.9_1_17:16623938-16667555:+|nuORF'] 66670 7543 LSSTQPTR True NCI_RA007_Epitope_Rep3 888.46649478392 888.46538993586 36.79 2 -0.5793749950359327 0.166736066623959 1.0 ['ENSG00000131381|ENST00000253699|RBSN'] 114936 13318 TTFRPELL True PC9_epitope_Rep6 975.5389314481898 975.53782993586 62.883 2 -0.579377264666275 0.166736066623959 1.0 ['ENSG00000108055|ENST00000361804|SMC3', 'ENST00000424783.1_1_2:99718519-99719212:+|nuORF'] 78238 14498 PAPVTLQP True PC9_epitope_Rep3 821.46470387877 821.46360993586 60.886 2 -0.5793978972368027 0.166736066623959 1.0 ['ENST00000456585.5_1_6:168397599-168397749:-|nuORF'] 113072 13350 TPWPRGRLLTA True PC9_epitope_Rep2 1266.71968977482 1266.7180349037899 56.623 3 -0.5795154190406707 0.1667814416809468 1.0 ['ENSG00000165898|ENST00000556816|ISCA2', 'nc|ENSG00000165898|Q86U28-2|ISCA2', 'ENST00000555139.1_1_14:74960477-74961199:+|nuORF'] 16646 8700 EESQRKCPP True H1975_Epitope_Rep2 1072.4971432891998 1072.4960499358601 38.427 2 -0.5796047304679293 0.16684015822430057 1.0 ['nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A'] 87592 8836 QTQQEEREVAL True H1975_Epitope_Rep3 1329.65245763029 1329.6513699358602 38.994 2 -0.5796142165544901 0.16684015822430057 1.0 ['ENST00000182527.3_1_6:52364724-52364970:-|nuORF'] 54796 7126 LAEYKFEFLQT True H1975_Epitope_Rep1 1387.7023679448298 1387.7012699358602 32.435 2 -0.5796835135553271 0.1668855294343732 1.0 ['ENSG00000147251|ENST00000276202|DOCK11', 'ENST00000553480.1_1_14:45332380-45332650:-|nuORF'] 56660 7107 LEAAGDKF True PC9_epitope_Rep5 849.42323298961 849.42212993586 32.305 2 -0.5797680518468896 0.16693089919128834 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 109043 2811 TEYTEGNKLRK True NCI_RA007_Epitope_Rep2 1337.69392851945 1337.6922749037901 15.263 3 -0.5798474966901492 0.1669415664483482 1.0 ['ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM'] 42937 9995 IFYYRRSRPG True NCI_RA007_Epitope_Rep2 1313.6992886834098 1313.69818993586 43.5 2 -0.5798527531573912 0.1669415664483482 1.0 ['ENST00000352251.7_2_13:39611425-39611503:-|nuORF'] 82179 5073 PTEKVSIPAGP True NCI_RA007_Epitope_Rep4 1094.5971746003 1094.5960699358602 26.015 2 -0.5798939009942623 0.1669549064821932 1.0 ['ENST00000454218.1_1_7:44148758-44149284:+|nuORF'] 115330 10325 TVEAQGPLPTQ True NCI_RA007_Epitope_Rep5 1139.5822528121498 1139.5811499358601 46.346 2 -0.5799049600531863 0.16696824608880848 1.0 ['ENST00000486390.1_1_1:16767709-16767853:+|nuORF'] 70678 4418 MDHVNEVYVKE True NCI_RA007_Epitope_Rep2 1361.6285513815703 1361.62690490379 21.818 3 -0.5799985156442552 0.16701361088871097 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 99950 9615 SLIHATFTL True PC9_epitope_Rep4 1001.5545815123301 1001.55348993586 44.61 2 -0.5802110547519651 0.16716303199154578 1.0 ['ENSG00000177476|ENST00000320002|OR2G3'] 64334 8822 LQNQQVLTG True PC9_epitope_Rep2 999.53490869691 999.53380993586 39.285 2 -0.5802147058690923 0.16716303199154578 1.0 ['nc|ENSG00000185591|P08047-3|SP1', 'nc|ENSG00000185591|P08047-2|SP1', 'ENSG00000185591|ENST00000327443|SP1'] 14468 20388 DTSHPLWNEAF True PC9_epitope_Rep4 1315.58331544131 1315.5822099358602 86.567 2 -0.5802660372191389 0.16716303199154578 1.0 ['PLA2G4D|p.V71L|1|0.31|ENSG00000159337|chr15:42087344-42087344|C/A|missense_variant'] 16041 8031 EEALHQFRSGK True H1975_Epitope_Rep3 1300.6523980606396 1300.6513099358601 35.864 2 -0.5802693389037085 0.16716303199154578 1.0 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 102076 4607 SPPRRARHGS True NCI_RA007_Epitope_Rep5 1119.6009716244698 1119.5998699358602 24.393 2 -0.5802860378973709 0.16717636698422864 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 71156 5034 MEVGGCTFIH True H1975_Epitope_Rep2 1092.47323704048 1092.47212993586 24.444 2 -0.5803097984530962 0.16718434788177655 1.0 ['ENSG00000177992|ENST00000325643|SPATA31E1'] 55736 13833 LDDSALYLSDK True PC9_epitope_Rep5 1238.60304782638 1238.6019499358601 58.229 2 -0.5803471763876048 0.16718434788177655 1.0 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 12152 12753 DIKEVRIMRWF True H1975_Epitope_Rep1 1491.80203949979 1491.8009499358602 54.114 2 -0.5803613145659803 0.16718434788177655 1.0 ['ENST00000357219.3_1_6:37186200-37186806:-|nuORF', 'ENSG00000172738|ENST00000651039|TMEM217', 'nc|ENSG00000172738|Q8N7C4|TMEM217'] 137724 8314 YNCQHYMECCP True PC9_epitope_Rep3 1389.46103475761 1389.4599299358601 36.951 2 -0.5804494127659696 0.16722702529618957 1.0 ['ENSG00000116690|ENST00000445192|PRG4', 'nc|ENSG00000116690|Q92954-3|PRG4', 'nc|ENSG00000116690|Q92954-6|PRG4'] 43942 5864 ILEQRQSVP True H1975_Epitope_Rep2 1068.5927579262 1068.5916699358602 27.541 2 -0.5804514941924019 0.16722702529618957 1.0 ['nc|ENSG00000156103|P51512-2|MMP16'] 107941 16351 TAYDLSSVI True NCI_RA007_Epitope_Rep4 967.48622716899 967.4856749679301 70.894 1 -0.5804630861634471 0.16724035798338163 1.0 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'ENST00000592516.1_1_19:11031622-11032430:+|nuORF'] 45125 10514 IQVKNHFNV True PC9_epitope_Rep4 1097.59817765981 1097.5970899358601 48.164 2 -0.5804691500120467 0.1672483350409836 1.0 ['nc|ENSG00000221955|A0AV02-2|SLC12A8'] 8210 4737 ATHTLDWLK True NCI_RA007_Epitope_Rep5 1083.57129420563 1083.57018993586 24.904 2 -0.5805080079119479 0.1672483350409836 1.0 ['ENSG00000075035|ENST00000547525|WSCD2', 'nc|ENSG00000075035|Q2TBF2-2|WSCD2'] 12523 13287 DLALALMITYK True H1975_Epitope_Rep3 1250.69444611342 1250.6933499358602 56.366 2 -0.5805292057068102 0.1672483350409836 1.0 ['nc|ENSG00000214655|A7E2V4-5|ZSWIM8', 'ENSG00000214655|ENST00000604729|ZSWIM8', 'nc|ENSG00000214655|A7E2V4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-3|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-2|ZSWIM8'] 83613 10307 QDVEKELRDGG True PC9_epitope_Rep5 1244.5996937814398 1244.5985899358602 44.633 2 -0.5805995083626696 0.16729368446329945 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant'] 18142 17983 EINEKSNILSN True PC9_epitope_Rep6 1259.63574493699 1259.6346499358601 81.8 2 -0.5806940373816443 0.16733367484151887 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000467263.1_1_3:160130128-160131402:+|nuORF'] 100192 13784 SLLGSLSVL True PC9_epitope_Rep2 887.5327834385901 887.53168993586 58.305 2 -0.5807097542412664 0.16733367484151887 1.0 ['SV2B|p.F543L|1|0.37|ENSG00000185518|chr15:91284142-91284142|C/A|missense_variant'] 33826 7077 GLVARALLTL True NCI_RA007_Epitope_Rep3 1025.6597152872098 1025.65860993586 34.953 2 -0.5807189342935302 0.16733367484151887 1.0 ['nc|ENSG00000197121|Q75T13-2|PGAP1', 'ENSG00000197121|ENST00000354764|PGAP1', 'nc|ENSG00000197121|Q75T13-3|PGAP1'] 128297 15836 VSAVQMLV True PC9_epitope_Rep1 845.4680750070498 845.46696993586 65.728 2 -0.5807744042312938 0.16734700411404058 1.0 ['ENST00000607286.5_1_5:476364-477927:+|nuORF'] 82235 16959 PTISPIPNV True PC9_epitope_Rep5 936.52803241132 936.52692993586 70.253 2 -0.5808153136686546 0.16736026634227544 1.0 ['CNTNAP5|p.L464Sfs*40|1|0.35|ENSG00000155052|chr2:124524367-124524367|G/-|frameshift_variant'] 112566 13481 TPALANIP True PC9_epitope_Rep1 795.44905381463 795.44794993586 56.711 2 -0.5808188778152249 0.16736026634227544 1.0 ['ENST00000529140.1_1_11:43511716-43515451:+|nuORF'] 55868 11035 LDFNKSGSVP True PC9_epitope_Rep1 1062.53457434374 1062.53346993586 47.334 2 -0.5808356694250162 0.16736026634227544 1.0 ['nc|ENSG00000180881|Q9BXY5|CAPS2', 'ENSG00000180881|ENST00000699294|CAPS2', 'nc|ENSG00000180881|Q9BXY5-5|CAPS2', 'nc|ENSG00000180881|Q9BXY5-3|CAPS2', 'ENST00000409004.5_1_12:75670025-75710066:-|nuORF', 'nc|ENSG00000180881|Q9BXY5-2|CAPS2'] 17869 9210 EICVNNTP True PC9_epitope_Rep4 888.40111764604 888.40002993586 43.025 2 -0.58083739325961 0.16736026634227544 1.0 ['ENST00000336139.8_1_11:123597023-123597197:-|nuORF'] 40411 14808 HRWRFTCYYYY True NCI_RA007_Epitope_Rep1 1656.72960283552 1656.72850993586 61.658 2 -0.5808470403771175 0.16736026634227544 1.0 ['ENST00000444199.1_1_19:55208384-55209490:+|nuORF', 'nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'ENSG00000244482|ENST00000396365|LILRA6', 'ENSG00000204577|ENST00000445347|LILRB3'] 64239 25318 LQKPKKKKKKK True NCI_RA007_Epitope_Rep4 1380.9656741269598 1380.96403490379 110.38 3 -0.5808502287882615 0.16736026634227544 1.0 ['ENST00000340726.7_1_8:72273997-72274438:-|nuORF'] 121895 8703 VGPGVSEFIQP True NCI_RA007_Epitope_Rep1 1128.5815245361598 1128.5804299358601 37.855 2 -0.5809484021942555 0.16736026634227544 1.0 ['ENSG00000176473|ENST00000402312|WDR25'] 124549 19119 VLGKALYLI True PC9_epitope_Rep1 988.63210355704 988.63100993586 78.331 2 -0.5809753888891696 0.16742161115290427 1.0 ['nc|ENSG00000132640|Q9Y2F9-2|BTBD3', 'ENSG00000132640|ENST00000378226|BTBD3'] 54931 12110 LAGSRRNQ True H1975_Epitope_Rep3 900.488961564 900.48786993586 51.746 2 -0.5810475676702762 0.16743493709785845 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1', 'MAP3K1|p.T946Kfs*22|1|0.62|ENSG00000095015|chr5:56882037-56882037|C/-|frameshift_variant', 'MAP3K1|p.T947Nfs*56|1|0.61|ENSG00000095015|chr5:56882039-56882040|AC/-|frameshift_variant'] 78101 5778 PAPAANSLA True PC9_epitope_Rep4 810.42356734278 810.42246993586 29.079 2 -0.5811117099603087 0.167464267994046 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant'] 87602 11004 QTRSRWRHLEI True PC9_epitope_Rep5 1480.801127983 1480.79947490379 47.315 3 -0.5811261973896564 0.16748555607125137 1.0 ['ENST00000313431.13_2_1:144932113-144932161:-|nuORF'] 5831 5796 APGDATPPAE True H1975_Epitope_Rep2 924.4188758851599 924.41776993586 27.283 2 -0.5811395829819274 0.16748555607125137 1.0 ['ENSG00000204569|ENST00000376511|PPP1R10'] 3165 5772 AGEEPPAQPP True H1975_Epitope_Rep2 991.4610750503098 991.45996993586 27.196 2 -0.5811407995727477 0.16748555607125137 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 125889 11162 VNSYFDSFL True NCI_RA007_Epitope_Rep5 1090.49712620586 1090.4960299358602 49.571 2 -0.581143260831291 0.16748555607125137 1.0 ['nc|ENSG00000138308|Q9BX93-2|PLA2G12B', 'ENSG00000138308|ENST00000373032|PLA2G12B'] 25361 6714 FEGYDSIDSPK True NCI_RA007_Epitope_Rep1 1256.55609763396 1256.55445490379 30.125 3 -0.5811571884407125 0.16749351854815478 1.0 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 129778 18002 VTKRTRSL True NCI_RA007_Epitope_Rep2 959.5876129761099 959.58650993586 74.769 2 -0.5811821388094924 0.16749351854815478 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 72333 15462 MTDGFQFEY True H1975_Epitope_Rep3 1136.44846176128 1136.44787496793 64.89 1 -0.5811849724437651 0.16749351854815478 1.0 ['ENSG00000108821|ENST00000225964|COL1A1'] 101298 13824 SLYCLSDEK True H1975_Epitope_Rep1 1056.4797618895598 1056.4786699358601 58.32 2 -0.5812244152278754 0.16752284475170837 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 78836 10271 PEQRELRPR True H1975_Epitope_Rep3 1179.6472531105499 1179.6461499358602 44.558 2 -0.5812854749159653 0.16753616694405327 1.0 ['ENSG00000109062|ENST00000262613|NHERF1'] 66934 11023 LSYIYNTVQ True NCI_RA007_Epitope_Rep1 1099.55497543515 1099.5538699358601 46.873 2 -0.5813291083911469 0.16756549152650865 1.0 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 134217 8409 WRRADGKPIAR True PC9_epitope_Rep6 1324.7476358581598 1324.74598490379 42.027 3 -0.5813427854693577 0.16756808653630748 1.0 ['ENSG00000144619|ENST00000418658|CNTN4', 'ENST00000438282.6_1_3:2613181-3030164:+|nuORF', 'ENST00000430505.6_1_3:2613181-3079017:+|nuORF'] 44130 15725 ILPCKYCYL True H1975_Epitope_Rep3 1114.55551011246 1114.5544099358601 65.928 2 -0.5813432057518598 0.16756808653630748 1.0 ['ENST00000441890.5_1_1:154193404-154197599:+|nuORF'] 26438 10903 FILTYTEA True PC9_epitope_Rep5 956.485498893 956.48440993586 46.926 2 -0.581406106621136 0.16756808653630748 1.0 ['KCNJ3|p.V93E|1|0.45|ENSG00000162989|chr2:154699053-154699053|T/A|missense_variant'] 68085 4483 LTPCHGAL True PC9_epitope_Rep6 810.4058091036599 810.40470993586 24.445 2 -0.5814062476872873 0.16756808653630748 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 60458 18427 LILKPVTSP True PC9_epitope_Rep2 966.61136811246 966.61026993586 76.211 2 -0.5814181252750386 0.16756808653630748 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 83186 14247 PYVNNVPHL True PC9_epitope_Rep2 1051.54507945779 1051.54398993586 60.068 2 -0.5814284887636555 0.16758140651252101 1.0 ['ENSG00000166986|ENST00000262027|MARS1', 'nc|ENSG00000166986|P56192-2|MARS1', 'ENST00000447721.6_1_12:57881873-57905922:+|nuORF'] 114382 6611 TSDKKDSFYTD True H1975_Epitope_Rep3 1305.5724759740897 1305.57136993586 30.381 2 -0.5814541860882381 0.167594726062468 1.0 ['ENSG00000111647|ENST00000279907|BLTP3B'] 42186 19234 IEGAVAYVPQ True PC9_epitope_Rep4 1045.5444107514497 1045.5433099358602 82.084 2 -0.5815505334901776 0.16763736439566065 1.0 ['ENSG00000091262|ENST00000205557|ABCC6', 'nc|ENSG00000091262|O95255-3|ABCC6'] 60203 12375 LIARGWRI True PC9_epitope_Rep4 983.6028691174299 983.60176993586 55.407 2 -0.5815755446169775 0.16763736439566065 1.0 ['ENSG00000075240|ENST00000406902|GRAMD4'] 79709 10128 PHPLLAFP True H1975_Epitope_Rep2 890.50142374066 890.50032993586 43.956 2 -0.5817112021276721 0.16771468343493495 1.0 ['nc|ENSG00000168062|Q8N1L9-2|BATF2', 'ENSG00000168062|ENST00000301887|BATF2'] 76687 13742 NTLGALPI True NCI_RA007_Epitope_Rep5 797.46470387877 797.4641549679301 59.541 1 -0.5818127452684665 0.1677866308278135 1.0 ['nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'ENSG00000162073|ENST00000318782|PAQR4', 'PAQR4|p.L165Cfs*71|1|0.29|ENSG00000162073|chr16:2971610-2971611|-/GGCG|frameshift_variant'] 33562 18196 GLKIGDTV True PC9_epitope_Rep5 801.45961849833 801.45852993586 75.0 2 -0.5818452948936643 0.1677866308278135 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 33872 18551 GLVQLMDRL True PC9_epitope_Rep3 1043.57975071435 1043.57864993586 76.575 2 -0.5818494839594377 0.1677866308278135 1.0 ['HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4'] 58401 20835 LEVPPPTEKDW True NCI_RA007_Epitope_Rep1 1309.65541775241 1309.65432993586 85.277 2 -0.5819279340518114 0.16779726097529757 1.0 ['nc|ENSG00000140527|Q6P2C0-2|WDR93', 'ENSG00000140527|ENST00000268130|WDR93'] 61557 11797 LLGLHEEGLRK True H1975_Epitope_Rep3 1263.72992010535 1263.7288299358602 50.524 2 -0.5819645278586302 0.16779726097529757 1.0 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000530314.5_1_16:70543112-70557304:-|nuORF', 'ENST00000562200.5_1_16:70543798-70557434:-|nuORF', 'nc|ENSG00000103051|Q9H9E3-2|COG4'] 130135 6558 VTRLEQSL True NCI_RA007_Epitope_Rep5 944.5290950404799 944.52798993586 31.887 2 -0.581999416778542 0.16783451718180073 1.0 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'nc|ENSG00000170037|Q8N137-4|CNTROB', 'ENST00000571632.5_1_17:7838298-7849136:+|nuORF'] 138948 22896 YSEIAYLFA True PC9_epitope_Rep2 1075.52261267771 1075.5215099358602 93.573 2 -0.5820591526556064 0.16783451718180073 1.0 ['ENSG00000134780|ENST00000257215|DAGLA', 'DAGLA|p.G454Efs*12|1|0.1|ENSG00000134780|chr11:61736339-61736342|GGGC/-|frameshift_variant', 'DAGLA|p.E787Afs*40|1|0.12|ENSG00000134780|chr11:61743719-61743743|GAGTCCCTGTACAGCTTCGACTCGC/-|frameshift_variant'] 12971 10900 DLPIDECEGP True H1975_Epitope_Rep1 1086.45394106454 1086.45284993586 46.889 2 -0.5820617547740995 0.16783451718180073 1.0 ['ENSG00000178031|ENST00000380548|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1', 'ENST00000380559.7_1_9:18706652-18908543:+|nuORF'] 128053 26595 VRRLKVSK True NCI_RA007_Epitope_Rep1 984.6556329662799 984.6550849679301 110.15 1 -0.5820679772402076 0.16783451718180073 1.0 ['ENST00000466078.1_1_13:33222909-33223050:+|nuORF'] 79169 10583 PGDYIPHLARR True PC9_epitope_Rep4 1293.6942033029698 1293.69256490379 48.448 3 -0.5821125233702501 0.1678451447768357 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|108|3|sense'] 23375 14325 EVTVTGPL True PC9_epitope_Rep1 814.4436340810199 814.44252993586 59.924 2 -0.5821477342321995 0.1678451447768357 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'OBSCN|p.H4054Tfs*31|1|0.21|ENSG00000154358|chr1:228307133-228307133|C/-|frameshift_variant', 'OBSCN|p.R2782Lfs*22|1|0.23|ENSG00000154358|chr1:228282079-228282080|-/T|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 104829 13057 STEDLHVTW True H1975_Epitope_Rep1 1086.49818883502 1086.49708993586 55.31 2 -0.5821536125214835 0.16787176862042488 1.0 ['ENSG00000127329|ENST00000334414|PTPRB', 'PTPRB|p.W1340*|1|0.13|ENSG00000127329|chr12:70559383-70559383|C/-|frameshift_variant', 'PTPRB|p.R1326Dfs*26|1|0.22|ENSG00000127329|chr12:70559428-70559428|C/-|frameshift_variant', 'nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB', 'PTPRB|p.E1160Sfs*17|2|0.15|ENSG00000127329|chr12:70562880-70562880|C/-|frameshift_variant'] 123616 20612 VILDLPLVI True NCI_RA007_Epitope_Rep3 993.6474192680099 993.64632993586 89.785 2 -0.5821608005832234 0.16787176862042488 1.0 ['ENSG00000265972|ENST00000582401|TXNIP', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP'] 63779 6522 LPSDWWESYLK True H1975_Epitope_Rep1 1422.6819668534197 1422.68032490379 30.148 3 -0.5821830608436415 0.16788507990338009 1.0 ['ENSG00000158553|ENST00000444565|POM121L2'] 13314 16188 DLYRLWRSRPW True PC9_epitope_Rep3 1546.8157154179798 1546.8140549037903 67.405 3 -0.5821863653303078 0.1678930193870369 1.0 ['nc|ENSG00000102539|O43193-2|MLNR', 'ENSG00000102539|ENST00000218721|MLNR'] 42918 11057 IFVWIQYEGRW True NCI_RA007_Epitope_Rep2 1495.76122023363 1495.76012993586 47.605 2 -0.5821933704315251 0.1678930193870369 1.0 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 126212 14620 VPGSKATASSL True PC9_epitope_Rep6 1016.55022440788 1016.54912993586 68.15 2 -0.5822395039780278 0.1678930193870369 1.0 ['nc|ENSG00000131233|P57773-2|GJA9'] 62458 14101 LLSLGRRTL True PC9_epitope_Rep2 1027.65021323267 1027.64910993586 59.514 2 -0.5822546155609523 0.16791963914392655 1.0 ['ENST00000425075.6_1_5:137289987-137295325:-|nuORF'] 102793 19729 SQETRYYGRK True PC9_epitope_Rep5 1286.6367479965 1286.63564993586 80.934 2 -0.5822559468295364 0.16791963914392655 1.0 ['ENSG00000198718|ENST00000361462|TOGARAM1'] 82981 10484 PYEEGPGPGP True H1975_Epitope_Rep2 998.4345259492998 998.43342993586 45.345 2 -0.5823418562961034 0.16795687917852917 1.0 ['FOSB|p.A313Lfs*13|1|0.12|ENSG00000125740|chr19:45472926-45472927|-/TCTC|frameshift_variant', 'nc|ENSG00000125740|P53539-9|FOSB', 'nc|ENSG00000125740|P53539-8|FOSB', 'ENST00000587358.1_1_19:45974364-45976267:+|nuORF', 'nc|ENSG00000125740|P53539-11|FOSB', 'nc|ENSG00000125740|P53539-7|FOSB', 'nc|ENSG00000125740|P53539-6|FOSB', 'nc|ENSG00000125740|P53539-5|FOSB', 'nc|ENSG00000125740|P53539-10|FOSB', 'nc|ENSG00000125740|P53539-4|FOSB', 'nc|ENSG00000125740|P53539-3|FOSB', 'nc|ENSG00000125740|P53539-2|FOSB', 'ENSG00000125740|ENST00000353609|FOSB'] 98504 13407 SILFDLNGSV True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 56.85 2 -0.5823563895288262 0.16795687917852917 1.0 ['SSTR2|p.P18L|1|0.39|ENSG00000180616|chr17:73169372-73169372|C/T|missense_variant'] 121341 4247 VGHRATAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 23.329 2 -0.582365639015055 0.16795687917852917 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 102450 17635 SPYCWLVWR True PC9_epitope_Rep5 1208.5800850675198 1208.5789899358601 72.845 2 -0.5824205446698247 0.16795687917852917 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2', 'nc|ENSG00000020181|Q96PE1-2|ADGRA2'] 118791 14712 VEEAVATLEA True H1975_Epitope_Rep2 1030.51825557326 1030.51767496793 61.751 1 -0.5825026434291622 0.1679701869711946 1.0 ['AFAP1L1|p.L665V|1|0.51|ENSG00000157510|chr5:149332712-149332712|C/G|missense_variant'] 127429 17769 VQRRCPSCF True PC9_epitope_Rep1 1094.5113538846997 1094.5102499358602 73.145 2 -0.5825889222563227 0.16799948819653254 1.0 ['ENST00000540608.5_1_18:21119776-21166285:-|nuORF'] 111051 5717 TLDQVKNSP True NCI_RA007_Epitope_Rep3 1000.5189242796 1000.51782993586 29.463 2 -0.5827177977375103 0.16802610114192496 1.0 ['SRGAP1|p.E994D|1|0.3|ENSG00000196935|chr12:64142396-64142396|G/T|missense_variant'] 65715 9149 LSHPWTHSVP True H1975_Epitope_Rep1 1159.5774422152301 1159.5763499358602 40.098 2 -0.5827251559391061 0.16802610114192496 1.0 ['ENST00000497543.5_1_3:75471596-75471728:-|nuORF'] 21323 13060 ERKYYYYERHR True H1975_Epitope_Rep3 1661.80627293309 1661.80516993586 55.475 2 -0.5827604075416667 0.1680473372781065 1.0 ['TOPORS|p.G873Vfs*29|1|0.11|ENSG00000197579|chr9:32541889-32541907|GTTGTATCAGTAGCTTTTC/-|frameshift_variant', 'nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 63719 9373 LPQSERITG True PC9_epitope_Rep1 999.53490869691 999.53380993586 40.911 2 -0.5827636332680532 0.1680473372781065 1.0 ['ENST00000299237.2_1_16:58032340-58033481:-|nuORF'] 132066 13678 VYIHVESKL True PC9_epitope_Rep4 1086.60734536118 1086.6062499358602 60.503 2 -0.582766073196991 0.1680473372781065 1.0 ['ENST00000323387.5_10:47416870-47420453:+|nuORF'] 136842 10727 YIVMKVYF True NCI_RA007_Epitope_Rep3 1061.5619753918897 1061.5608699358602 49.24 2 -0.5828477979884724 0.1680473372781065 1.0 ['GABRA4|p.T247K|1|0.49|ENSG00000109158|chr4:46971217-46971217|G/T|missense_variant'] 73040 5616 NDILCLSLPDK True NCI_RA007_Epitope_Rep2 1229.6325741328499 1229.6314699358602 26.463 2 -0.5828837398172867 0.1680578208449263 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 14430 4549 DTLIMMYKT True NCI_RA007_Epitope_Rep2 1114.5402539711401 1114.53914993586 22.323 2 -0.5828985341842421 0.1680578208449263 1.0 ['ENSG00000185002|ENST00000332958|RFX6'] 80417 9132 PLKEEEYRKLR True H1975_Epitope_Rep1 1459.8147123584697 1459.81360993586 40.032 2 -0.5829029921638161 0.1680578208449263 1.0 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 87738 18875 QVESVQLKV True PC9_epitope_Rep5 1028.5866099165999 1028.58607496793 77.622 1 -0.5829036243375979 0.1680578208449263 1.0 ['ENST00000492185.5_1_6:31920080-31921650:-|nuORF', 'ENST00000488426.5_1_6:31920080-31922695:-|nuORF', 'nc|ENSG00000204356|P18615-4|NELFE', 'ENSG00000204356|ENST00000375429|NELFE', 'nc|ENSG00000204356|P18615-3|NELFE'] 113332 12286 TQKEQEEK True PC9_epitope_Rep5 1018.4931034545799 1018.49200993586 52.246 2 -0.5829073286135938 0.1680578208449263 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant', 'ENST00000426414.6_1_4:85730999-85781744:-|nuORF', 'ENST00000504990.1_1_4:85771028-85781672:-|nuORF', 'WDFY3|p.H165Pfs*4|1|0.14|ENSG00000163625|chr4:84837011-84837012|-/G|frameshift_variant'] 133422 9365 WFWQDRFWLPP True PC9_epitope_Rep1 1576.7615545867998 1576.7599049037901 40.88 3 -0.5829154565330618 0.1680578208449263 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 127562 19443 VQVRGRLQKP True H1975_Epitope_Rep2 1179.7200241279897 1179.7189299358602 80.694 2 -0.5829212757621088 0.1680578208449263 1.0 ['nc|ENSG00000145734|A6H8Y1-7|BDP1', 'nc|ENSG00000145734|A6H8Y1-6|BDP1', 'ENSG00000145734|ENST00000358731|BDP1', 'nc|ENSG00000145734|A6H8Y1-5|BDP1', 'ENST00000508157.3_1_5:70790975-70807035:+|nuORF', 'nc|ENSG00000145734|A6H8Y1-4|BDP1', 'nc|ENSG00000145734|A6H8Y1-3|BDP1', 'nc|ENSG00000145734|A6H8Y1-2|BDP1', 'ENST00000508917.6_1_5:70751704-70841064:+|nuORF'] 108117 6451 TDMHRTWRETF True H1975_Epitope_Rep1 1478.6724818822202 1478.6708249037902 29.875 3 -0.5830063333450998 0.1680578208449263 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7', 'nc|ENSG00000146205|Q6IWH7-3|ANO7', 'nc|ENSG00000146205|Q6IWH7-2|ANO7'] 32341 19768 GGCFFFSC True H1975_Epitope_Rep3 866.3091318374999 866.30802993586 82.778 2 -0.5830191792703002 0.16807112361886184 1.0 ['chr5:90929313-90965415|333|22.99|0.23|6.64|+|2|TE_info:L1PA2,L1PA2_dup1646,L1,LINE,donor,-,90923631,90929313|None,ADGRV1|19'] 129779 18263 VTKRTRSL True NCI_RA007_Epitope_Rep2 959.5876129761099 959.58650993586 75.796 2 -0.5830999847642498 0.1681270186434716 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 72868 5237 NAQKSKDLKV True NCI_RA007_Epitope_Rep3 1129.64552177505 1129.6444299358602 27.605 2 -0.5831218373783973 0.1681270186434716 1.0 ['ENST00000563307.1_1_16:58197751-58197943:-|nuORF'] 102773 7197 SQEKSQDCCK True NCI_RA007_Epitope_Rep5 1154.4696082120197 1154.46850993586 34.362 2 -0.5831283413762507 0.1681270186434716 1.0 ['ENSG00000158321|ENST00000342771|AUTS2', 'nc|ENSG00000158321|Q8WXX7-2|AUTS2'] 58778 12158 LFNLLEFRR True NCI_RA007_Epitope_Rep4 1206.6873270173799 1206.6862299358602 53.763 2 -0.5832016214265189 0.16815630845977966 1.0 ['nc|ENSG00000155313|Q9UHP3|USP25', 'nc|ENSG00000155313|Q9UHP3-1|USP25', 'ENSG00000155313|ENST00000400183|USP25'] 118829 5631 VEEGKMEVQK True NCI_RA007_Epitope_Rep1 1175.58562394043 1175.58452993586 25.966 2 -0.5832933307372902 0.16816423112589135 1.0 ['ENSG00000178996|ENST00000381410|SNX18'] 68452 15529 LTTTRRAV True PC9_epitope_Rep6 916.5454138109599 916.54430993586 71.91 2 -0.5833263649718567 0.16816423112589135 1.0 ['nc|ENSG00000120594|Q6UX71-2|PLXDC2', 'ENSG00000120594|ENST00000377252|PLXDC2', 'nc|ENSG00000120594|Q6UX71-3|PLXDC2', 'ENST00000377238.2_1_10:20332341-20568745:+|nuORF'] 106315 24697 SVRRPRCCSR True PC9_epitope_Rep2 1218.6186129178998 1218.6175099358602 100.68 2 -0.5833356650631742 0.16816423112589135 1.0 ['ENSG00000169258|ENST00000303991|GPRIN1'] 8208 5689 ATHSRWPYR True H1975_Epitope_Rep2 1172.5839245779998 1172.58226490379 26.881 3 -0.5833899717040832 0.16817484172155783 1.0 ['ENST00000541562.5_2_6:30882981-30883968:+|nuORF'] 122553 6660 VGTAQGHIF True PC9_epitope_Rep3 928.4766655447999 928.47556993586 30.642 2 -0.5834353784518755 0.16817484172155783 1.0 ['ENSG00000104142|ENST00000220509|VPS18'] 104930 15754 STFVSFLQKEK True H1975_Epitope_Rep3 1312.7027022979998 1312.70160993586 66.04 2 -0.583545237717197 0.16818276286550174 1.0 ['ENST00000592859.1_1_19:9869411-9879277:-|nuORF', 'ENST00000589453.5_1_19:9875628-9879277:-|nuORF'] 111010 13791 TLDIELQSL True PC9_epitope_Rep1 1030.55464108198 1030.55354993586 57.892 2 -0.5835536269820996 0.16818276286550174 1.0 ['CON__Q148H6'] 4507 9740 AKLCPRPDEVE True H1975_Epitope_Rep1 1255.6230720783099 1255.62196993586 42.394 2 -0.5835633636215256 0.16818276286550174 1.0 ['GBP7|p.S156L|1|0.09|ENSG00000213512|chr1:89152426-89152426|G/A|missense_variant'] 122446 10385 VGSLLEAPTCL True H1975_Epitope_Rep1 1101.57399662757 1101.57288993586 44.895 2 -0.5836103236378146 0.16821204757641642 1.0 ['ENST00000511331.5_1_5:180673825-180698596:+|nuORF', 'ENST00000505151.5_1_5:180674073-180684306:+|nuORF'] 32898 10998 GINCHINV True PC9_epitope_Rep6 868.4225217969599 868.42142993586 53.196 2 -0.583678384652952 0.16827330423800618 1.0 ['ENSG00000184916|ENST00000331782|JAG2'] 73444 12159 NETLDEDLFHK True H1975_Epitope_Rep1 1359.63065955655 1359.6295699358602 51.787 2 -0.5837502735434426 0.16828391015906002 1.0 ['nc|ENSG00000101311|Q9BQL6-3|FERMT1', 'ENSG00000101311|ENST00000217289|FERMT1'] 127797 16897 VRKSLGRG True NCI_RA007_Epitope_Rep1 871.5351834804299 871.53408993586 69.853 2 -0.5837615425869411 0.16828391015906002 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 77911 11334 PAIAIATA True PC9_epitope_Rep4 726.4275900940601 726.4270449679301 51.375 1 -0.5837660621676948 0.1682997394542926 1.0 ['ENSG00000176769|ENST00000368642|TCERG1L'] 46502 19548 ITPISVFIF True NCI_RA007_Epitope_Rep3 1035.60046907559 1035.59936993586 85.272 2 -0.5837740183867938 0.1682997394542926 1.0 ['MLT1C_dup7742|chr7:13103710-13104173:+|1.4478089862038896|0.0430416878633181|5.07|438.0|28|2|anti-sense'] 89055 6241 REEFYREERRL True NCI_RA007_Epitope_Rep5 1581.8011875526497 1581.7995449037903 30.682 3 -0.5837985565741813 0.1682997394542926 1.0 ['RBBP6|p.Q645E|1|0.65|ENSG00000122257|chr16:24567486-24567486|C/G|missense_variant'] 127796 16808 VRKSLGRG True NCI_RA007_Epitope_Rep1 871.5351834804299 871.53408993586 69.508 2 -0.583833746726818 0.1682997394542926 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 16333 16312 EEKGWRRRRWR True H1975_Epitope_Rep3 1613.8763586119298 1613.8752699358602 68.218 2 -0.5838534368673948 0.1682997394542926 1.0 ['ENST00000597330.1_1_19:58557520-58558126:+|nuORF'] 55326 7093 LARTEAKI True PC9_epitope_Rep4 900.5392658013599 900.53816993586 34.551 2 -0.5838598818680683 0.1682997394542926 1.0 ['ENSG00000196739|ENST00000356083|COL27A1', 'nc|ENSG00000196739|Q8IZC6-3|COL27A1'] 68135 21481 LTPLPEELP True PC9_epitope_Rep1 1007.55391280599 1007.55280993586 87.469 2 -0.5839194308428913 0.16832885820227592 1.0 ['KCNA5|p.P79T|1|0.44|ENSG00000130037|chr12:5044382-5044382|C/A|missense_variant'] 60378 26576 LIIIKDLLLLI True H1975_Epitope_Rep3 1278.8890465156999 1278.8874149037902 110.96 3 -0.58395527097574 0.16832885820227592 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 42210 9862 IEGQNNKL True PC9_epitope_Rep6 914.48214484806 914.48104993586 48.416 2 -0.5839578564227826 0.16832885820227592 1.0 ['DEPDC1|p.K501Nfs*15|1|0.37|ENSG00000024526|chr1:68482308-68482308|C/-|frameshift_variant', 'ENSG00000024526|ENST00000456315|DEPDC1'] 6689 10323 AQAPSSTISL True PC9_epitope_Rep3 973.50802524273 973.50692993586 44.652 2 -0.5839777224952248 0.16832885820227592 1.0 ['ENST00000459892.5_1_2:26531956-26538428:-|nuORF', 'nc|ENSG00000173567|Q8IZF5-2|ADGRF3', 'nc|ENSG00000173567|Q8IZF5-3|ADGRF3', 'ENSG00000173567|ENST00000651242|ADGRF3', 'nc|ENSG00000173567|Q8IZF5|ADGRF3'] 119609 9314 VERVPFDAATL True PC9_epitope_Rep1 1216.6451874218797 1216.6435349037902 40.682 3 -0.583982656329657 0.16832885820227592 1.0 ['ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14', 'ENST00000373807.5_1_9:124074589-124093809:+|nuORF'] 86991 23773 QRWKRIRQRWK True H1975_Epitope_Rep3 1639.9647796935099 1639.96257987172 99.145 4 -0.5839911543133159 0.16832885820227592 1.0 ['ENSG00000267796|ENST00000301159|LIN37', 'ENST00000595455.1_1_19:36244761-36245372:+|nuORF'] 33359 13469 GLEIGSLLLP True NCI_RA007_Epitope_Rep4 1010.6011973515799 1010.60010993586 59.012 2 -0.5840019654401973 0.16832885820227592 1.0 ['ENSG00000164897|ENST00000297533|TMUB1'] 33884 13912 GLWKAERYELI True H1975_Epitope_Rep2 1376.7452358163198 1376.7436049037901 58.659 3 -0.5841777589963072 0.16842206204350396 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9'] 120903 16333 VGEALKTVL True PC9_epitope_Rep2 928.5593325396 928.55822993586 68.072 2 -0.5841900801212218 0.16844325827433557 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-2|DMD'] 10712 5410 CTGSIRQDWA True PC9_epitope_Rep3 1135.5080423260702 1135.5069499358601 25.883 2 -0.5842005328149601 0.16844325827433557 1.0 ['FAT2|p.P578Afs*16|1|0.43|ENSG00000086570|chr5:151567200-151567201|-/C|frameshift_variant'] 70706 13047 MDPFNHRIF True PC9_epitope_Rep4 1175.5545985956699 1175.5535099358601 58.078 2 -0.5842167074305075 0.16844325827433557 1.0 ['ENST00000395526.8_1_10:51946049-51946148:-|nuORF'] 61572 19518 LLGPLSVTG True PC9_epitope_Rep1 855.50656869075 855.50546993586 79.896 2 -0.5842540200968348 0.16844325827433557 1.0 ['ENSG00000184933|ENST00000641196|OR6A2'] 38211 3324 HETQPLLNLK True NCI_RA007_Epitope_Rep2 1191.6611718391898 1191.65953490379 17.592 3 -0.584288883420158 0.16845385537355173 1.0 ['ENST00000496911.1_1_2:74733844-74734286:-|nuORF', 'ENST00000480844.2_1_2:74732736-74734502:-|nuORF', 'nc|ENSG00000115289|Q9BSM1-3|PCGF1', 'ENST00000475863.5_1_2:74732272-74734286:-|nuORF', 'ENSG00000115289|ENST00000233630|PCGF1'] 3213 6594 AGEVAKEWQEL True NCI_RA007_Epitope_Rep5 1258.6193665968597 1258.61826993586 32.023 2 -0.5842974059878793 0.16845385537355173 1.0 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'ENST00000451892.1_1_1:240307909-240308467:-|nuORF'] 74446 4312 NIYRLVTK True NCI_RA007_Epitope_Rep5 1005.5971150306499 1005.59600993586 23.18 2 -0.5843223162479255 0.16848312452058298 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 115187 6577 TVARSPVAP True PC9_epitope_Rep5 896.5079656730799 896.50686993586 30.269 2 -0.5843894347073693 0.168512392732154 1.0 ['ENSG00000197063|ENST00000357736|MAFG'] 33112 6978 GKKSGFVN True NCI_RA007_Epitope_Rep5 835.45520182423 835.45410993586 33.523 2 -0.5844697517521591 0.16854166000830964 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 85836 7826 QMPELRENP True H1975_Epitope_Rep3 1112.52844341748 1112.52734993586 35.081 2 -0.5845067601195315 0.16855225311601152 1.0 ['nc|ENSG00000136425|O75838-3|CIB2', 'ENSG00000136425|ENST00000258930|CIB2', 'nc|ENSG00000136425|O75838-2|CIB2'] 81335 5544 PPRPPPPPP True PC9_epitope_Rep5 950.5337864980999 950.53268993586 26.331 2 -0.5845199778525053 0.16855225311601152 1.0 ['ENSG00000142235|ENST00000600059|LMTK3', 'ENST00000481658.1_1_2:203500234-203589753:+|nuORF', 'nc|ENSG00000138439|Q6P1L5-2|FAM117B', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF'] 72571 9364 MVNTLLERY True H1975_Epitope_Rep1 1137.5852300176098 1137.5841299358601 40.926 2 -0.584598381248358 0.16857882458214823 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 98688 5876 SIQRISSVEGR True NCI_RA007_Epitope_Rep2 1230.66804812478 1230.66640490379 27.475 3 -0.5845985524431339 0.16857882458214823 1.0 ['OR13F1|p.L226Q|2|0.26|ENSG00000186881|chr9:104504939-104504939|T/A|missense_variant'] 62743 10420 LLYRGRGVP True H1975_Epitope_Rep3 1029.6083484206897 1029.6072499358602 45.139 2 -0.584628908219511 0.168589415825131 1.0 ['ENST00000357666.8_1_19:53463395-53466070:-|nuORF', 'ENST00000444460.6_1_19:53459334-53466118:-|nuORF', 'ENST00000457013.6_1_19:53456123-53466148:-|nuORF'] 64751 19966 LRRRKRDWVIP True PC9_epitope_Rep6 1493.9055334818897 1493.9044299358602 89.462 2 -0.5846590922219083 0.168589415825131 1.0 ['nc|ENSG00000179242|P55283-2|CDH4', 'ENSG00000179242|ENST00000614565|CDH4'] 127239 16140 VQILCCLLI True PC9_epitope_Rep1 1016.5762455570399 1016.5751499358599 66.897 2 -0.5846848693757408 0.1686000063912057 1.0 ['ENSG00000166927|ENST00000300184|MS4A7'] 63624 11837 LPMETPLVVK True PC9_epitope_Rep6 1125.64676764501 1125.64513490379 56.738 3 -0.5846939820557581 0.1686000063912057 1.0 ['ENSG00000165953|ENST00000677451|SERPINA12'] 105617 5570 SVETEKLLKY True NCI_RA007_Epitope_Rep5 1208.6652541601197 1208.66414993586 28.11 2 -0.5847630728047817 0.16863716248602012 1.0 ['nc|ENSG00000116747|P10155-3|RO60', 'nc|ENSG00000116747|P10155-5|RO60', 'nc|ENSG00000116747|P10155-4|RO60', 'ENSG00000116747|ENST00000400968|RO60'] 95288 2640 SAEAMDDFMKR True NCI_RA007_Epitope_Rep3 1299.55875756959 1299.55711490379 14.844 3 -0.584807412074953 0.16863716248602012 1.0 ['nc|ENSG00000170525|Q16875-3|PFKFB3', 'nc|ENSG00000170525|Q16875-2|PFKFB3', 'ENSG00000170525|ENST00000379775|PFKFB3', 'nc|ENSG00000170525|Q16875-4|PFKFB3'] 103987 17271 SRRMRRRNRHQ True NCI_RA007_Epitope_Rep2 1551.85016094743 1551.84850490379 71.917 3 -0.5848241198012402 0.16863716248602012 1.0 ['ENST00000541683.1_1_11:61582434-61582803:-|nuORF'] 58363 6989 LEVGESHVL True H1975_Epitope_Rep3 981.5131106231701 981.51200993586 31.845 2 -0.5848558770772327 0.16863716248602012 1.0 ['ENSG00000118655|ENST00000650450|DCLRE1B'] 40439 10084 HSDFQTLIS True PC9_epitope_Rep1 1046.50327421546 1046.5021699358601 43.658 2 -0.5849469540206563 0.1686956799591002 1.0 ['ENSG00000242550|ENST00000238508|SERPINB10'] 65591 10003 LSGISLAVN True H1975_Epitope_Rep1 872.49673228304 872.49618496793 43.412 1 -0.5849621824820496 0.1686956799591002 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000589793.1_1_17:76539878-76567391:-|nuORF', 'nc|ENSG00000187775|Q9UFH2-4|DNAH17'] 128927 5648 VSTSATQGNGT True PC9_epitope_Rep1 1021.4676169827299 1021.46650993586 26.549 2 -0.5850416403968864 0.16872224174841038 1.0 ['LRRC36|p.L211V|1|0.43|ENSG00000159708|chr16:67363643-67363643|C/G|missense_variant'] 44011 14842 ILIFEWWYFRK True H1975_Epitope_Rep3 1599.8602059989096 1599.85910993586 62.472 2 -0.5850919498244767 0.16872224174841038 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF', 'nc|ENSG00000004866|Q9NRC1-5|ST7', 'nc|ENSG00000004866|Q9NRC1-3|ST7', 'nc|ENSG00000004866|Q9NRC1-2|ST7', 'nc|ENSG00000004866|Q9NRC1-7|ST7', 'nc|ENSG00000004866|Q9NRC1-6|ST7'] 129960 24535 VTNNVIRLKP True PC9_epitope_Rep4 1152.69789170108 1152.69737496793 102.86 1 -0.585193815246677 0.1687672720883053 1.0 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF'] 14401 11207 DTGMFRGCRI True PC9_epitope_Rep6 1154.5324832520998 1154.53138993586 54.086 2 -0.5852432446938372 0.1687672720883053 1.0 ['ENSG00000121039|ENST00000240285|RDH10'] 25741 12376 FFLRHLSIT True NCI_RA007_Epitope_Rep1 1132.6393141958 1132.63820993586 52.113 2 -0.5852704616423001 0.1687672720883053 1.0 ['ENSG00000150261|ENST00000279783|OR8K1'] 56883 4354 LEDLSGHSVS True H1975_Epitope_Rep2 1042.49310345458 1042.49200993586 21.863 2 -0.5852910531197091 0.1687672720883053 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 20381 19370 EPKPDSNLL True PC9_epitope_Rep5 1011.52367530687 1011.52256993586 79.553 2 -0.5853542173558584 0.1687672720883053 1.0 ['ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3'] 54800 9487 LAFCCYTSVL True PC9_epitope_Rep5 1118.5140392233 1118.5129499358602 41.448 2 -0.5853574687932369 0.1687672720883053 1.0 ['ENSG00000241697|ENST00000374879|TMEFF1'] 128226 23874 VRVPHLRRLLQ True H1975_Epitope_Rep2 1385.87317072445 1385.87152490379 98.342 3 -0.5853801148517016 0.1687672720883053 1.0 ['ENST00000357402.9_1_16:29831738-29841859:+|nuORF', 'ENST00000563915.5_1_16:29831753-29841878:+|nuORF'] 112325 14066 TMLARLPSNF True PC9_epitope_Rep2 1148.60121443492 1148.59957490379 59.381 3 -0.5854087679830553 0.16877785409644905 1.0 ['nc|ENSG00000198198|Q5T011-7|SZT2'] 100985 17332 SLSTYFKAL True PC9_epitope_Rep6 1028.5542471591598 1028.5531499358601 79.28 2 -0.5854124751174028 0.16877785409644905 1.0 ['ENSG00000012660|ENST00000304434|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-2|ELOVL5', 'nc|ENSG00000012660|Q9NYP7-3|ELOVL5', 'ENST00000485336.5_1_6:53155264-53213696:-|nuORF'] 116217 7199 TVTSRQSEI True PC9_epitope_Rep6 1019.52473793603 1019.52364993586 36.779 2 -0.5855460824783163 0.16883635492372814 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1', 'BAIAP2L1|p.E165G|1|0.47|ENSG00000006453|chr7:98315605-98315605|T/C|missense_variant'] 11508 16253 DGGTDNPAF True PC9_epitope_Rep1 892.3562756285999 892.35516993586 67.335 2 -0.5855583134926118 0.16883635492372814 1.0 ['ENSG00000256870|ENST00000536262|SLC5A8'] 84992 8125 QIEDTLRRD True H1975_Epitope_Rep1 1144.58364979448 1144.58254993586 36.194 2 -0.585666519479283 0.16884693404890827 1.0 ['ENSG00000007080|ENST00000445755|CCDC124'] 70598 7917 LYYYRDRDWRW True NCI_RA007_Epitope_Rep2 1690.8004592766597 1690.79936993586 35.429 2 -0.5857186935542501 0.16884693404890827 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 54742 5496 LAEPM[Oxidation]TYKLM[Oxidation] True NCI_RA007_Epitope_Rep1 1227.58793320043 1227.5868299358601 25.449 2 -0.5857450659448094 0.1688680902716775 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1'] 122218 12812 VGRNRGLK True PC9_epitope_Rep2 898.5460825172999 898.54498993586 54.583 2 -0.5857518966199233 0.1688680902716775 1.0 ['ENST00000233813.4_1_2:217539772-217539967:-|nuORF'] 136511 21880 YHLNKYYNE True PC9_epitope_Rep1 1242.5669371011797 1242.56530490379 88.974 3 -0.5857568738115522 0.1688680902716775 1.0 ['ENSG00000180660|ENST00000379919|MAB21L1'] 82743 7916 PVQDTPVA True NCI_RA007_Epitope_Rep2 825.4232329896099 825.4226849679301 35.425 1 -0.5857736101690687 0.1688680902716775 1.0 ['ENSG00000186063|ENST00000340020|AIDA', 'nc|ENSG00000186063|Q96BJ3-2|AIDA', 'ENST00000514881.1_1_4:159199390-159199825:+|nuORF', 'ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 135793 14256 YENLKWTLERK True NCI_RA007_Epitope_Rep1 1478.7881632574597 1478.78706993586 59.488 2 -0.5857958918425932 0.16887866736939613 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 63606 19484 LPLPPPQLSI True PC9_epitope_Rep4 1073.6484818971699 1073.64738993586 83.061 2 -0.5857966791761285 0.16887866736939613 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 72864 11665 NAQFKSLV True PC9_epitope_Rep2 905.4970666362099 905.49596993586 50.2 2 -0.585802590766595 0.16889194109943464 1.0 ['ENST00000533507.5_1_11:47602194-47606030:+|nuORF', 'nc|ENSG00000213619|O75489-2|NDUFS3', 'ENSG00000213619|ENST00000263774|NDUFS3'] 134047 25382 WQGRRLAL True PC9_epitope_Rep3 998.5773826455799 998.57628993586 103.05 2 -0.5858707590863874 0.16893715563363412 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 26761 16976 FLDILYTTV True PC9_epitope_Rep2 1083.5852129342702 1083.5841099358602 70.545 2 -0.5859937542037968 0.1690302798006899 1.0 ['OR6M1|p.D119*|1|0.27|ENSG00000196099|chr11:123805995-123805996|-/A|frameshift_variant', 'OR6M1|p.C238Lfs*31|1|0.17|ENSG00000196099|chr11:123805637-123805638|-/A|frameshift_variant', 'ENSG00000196099|ENST00000309154|OR6M1'] 117293 15529 VAADSQEEL True PC9_epitope_Rep5 960.44000525256 960.43890993586 64.743 2 -0.5860056119774409 0.16904355047351358 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000477870.5_1_20:39796371-39799023:+|nuORF'] 60934 22828 LKYLLKEIESI True PC9_epitope_Rep2 1347.8013537101099 1347.79969490379 93.298 3 -0.586024167758253 0.16907009054759736 1.0 ['ENSG00000183439|ENST00000710271|TRIM61'] 59952 7513 LHLSQSHSI True PC9_epitope_Rep1 1020.5352430500802 1020.53414993586 33.717 2 -0.5860419019293615 0.16907009054759736 1.0 ['ENST00000418428.6_2_7:12568628-12580546:+|nuORF'] 80699 13048 PLPVPPPTG True PC9_epitope_Rep5 873.49600400705 873.49490993586 55.193 2 -0.5861185557007698 0.16908335994889812 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 73113 4953 NDTAMLCKAP True NCI_RA007_Epitope_Rep5 1062.48380172418 1062.4827099358602 25.752 2 -0.5861766522588844 0.1690939286512727 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 31712 13354 GEIQAMRQKSR True H1975_Epitope_Rep1 1302.6826526430998 1302.6815499358602 56.476 2 -0.586195456273663 0.1690939286512727 1.0 ['ENSG00000171451|ENST00000310045|DSEL'] 36888 7841 GVQPPNVP True NCI_RA007_Epitope_Rep1 806.4286527232199 806.42754993586 34.49 2 -0.5862846258533481 0.16911236367700833 1.0 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 24701 12992 FAVFHPHFVL True PC9_epitope_Rep4 1212.64439957624 1212.64276490379 57.866 3 -0.5863238952261208 0.16911236367700833 1.0 ['ENSG00000147262|ENST00000682440|GPR119'] 902 4711 ADNAFDDEYLK True NCI_RA007_Epitope_Rep4 1299.5619112903898 1299.56026490379 24.55 3 -0.5863428425003003 0.16911236367700833 1.0 ['nc|ENSG00000156219|Q13508-2|ART3', 'ENST00000513494.5_1_4:76997042-77020397:+|nuORF', 'nc|ENSG00000156219|Q13508-3|ART3', 'ENSG00000156219|ENST00000355810|ART3'] 58150 15309 LESFPELTII True PC9_epitope_Rep2 1160.63289140268 1160.63125490379 64.168 3 -0.5863692886786528 0.16911236367700833 1.0 ['ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 133841 23088 WLWWQPWWWWK True PC9_epitope_Rep2 1786.85612367798 1786.85502993586 94.298 2 -0.5863762710409305 0.16911236367700833 1.0 ['chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 14227 18433 DSYRDRYNRRR True PC9_epitope_Rep6 1555.7716187598696 1555.7705299358602 83.546 2 -0.586391585882209 0.16913619671084146 1.0 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26'] 97250 14900 SFMVDRVVDL True PC9_epitope_Rep5 1179.5957947013098 1179.59413490379 62.316 3 -0.5864011850260882 0.16913619671084146 1.0 ['ENST00000487921.5_1_17:56769962-56783250:+|nuORF', 'ENST00000475762.5_1_17:56772326-56801433:+|nuORF', 'ENSG00000108384|ENST00000337432|RAD51C'] 107436 13218 SYVKDLVVQR True PC9_epitope_Rep6 1205.6768219033297 1205.6751749037899 62.494 3 -0.5864120758239436 0.16913619671084146 1.0 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 80961 8704 PNFLKFLAP True NCI_RA007_Epitope_Rep4 1045.59605240149 1045.59494993586 40.27 2 -0.5864309910214014 0.16914946272612605 1.0 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'ENST00000469803.1_1_4:38051397-38056602:+|nuORF'] 90024 14510 RGGGAFGG True NCI_RA007_Epitope_Rep2 677.32452200785 677.3239749679301 61.104 1 -0.5864323981308135 0.16916272831779283 1.0 ['ENST00000587887.5_1_19:2476414-2477062:+|nuORF', 'ENST00000215631.8_1_19:2476379-2477062:+|nuORF', 'ENST00000593043.1_3_19:2476502-2477062:+|nuORF'] 55896 10353 LDGINSGI True PC9_epitope_Rep1 787.40758292547 787.40648993586 44.704 2 -0.5864646751812528 0.1691732924609637 1.0 ['nc|ENSG00000189001|Q6UWP8-2|SBSN', 'SBSN|p.K489Rfs*57|1|0.45|ENSG00000189001|chr19:35526818-35526818|C/-|frameshift_variant', 'SBSN|p.H481Qfs*65|1|0.39|ENSG00000189001|chr19:35526839-35526839|G/-|frameshift_variant', 'ENSG00000189001|ENST00000452271|SBSN'] 55735 14315 LDDSALYLSDK True PC9_epitope_Rep3 1238.60304782638 1238.6019499358601 60.149 2 -0.5864759534583057 0.1691732924609637 1.0 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 58745 22390 LFLLQPTV True PC9_epitope_Rep2 929.55860426361 929.55750993586 91.618 2 -0.5864979243803088 0.16918655703680052 1.0 ['NXPH1|p.V201Lfs*37|1|0.33|ENSG00000122584|chr7:8751553-8751553|G/-|frameshift_variant', 'ENSG00000122584|ENST00000405863|NXPH1'] 45552 15102 ISGGPAWLGL True PC9_epitope_Rep2 969.5283667644899 969.52726993586 63.347 2 -0.5865316335803022 0.16921578644868765 1.0 ['ENST00000586583.1_1_17:76338963-76340151:+|nuORF'] 100217 10158 SLLLTNSASLW True H1975_Epitope_Rep1 1203.64993844915 1203.6488499358602 44.011 2 -0.5865850443364892 0.16922094508301405 1.0 ['ENST00000409790.5_2_16:11273112-11273262:+|nuORF'] 98720 17200 SIRPSWSSSTL True PC9_epitope_Rep5 1219.61970095003 1219.6186099358601 71.179 2 -0.5866472133458752 0.16922094508301405 1.0 ['ENST00000575712.5_1_17:79009028-79031686:+|nuORF'] 35120 12221 GRSWAFRLPWM True H1975_Epitope_Rep3 1405.7077451921298 1405.70664993586 52.181 2 -0.5866539408866254 0.16922094508301405 1.0 ['ENST00000381470.7_1_8:21939551-21939809:+|nuORF'] 32872 13314 GILGPHSLPV True PC9_epitope_Rep2 988.57056592964 988.56946993586 56.487 2 -0.5866767541816513 0.16922094508301405 1.0 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|9|1|sense'] 112067 13436 TLTIETVI True PC9_epitope_Rep5 888.5167990212799 888.51570993586 56.698 2 -0.586699760332756 0.16922880449531472 1.0 ['nc|ENSG00000183378|Q7RTZ1|OVCH2', 'ENSG00000183378|ENST00000533663|OVCH2'] 96037 7441 SEAPAGALDY True H1975_Epitope_Rep2 992.4450906329998 992.44398993586 33.567 2 -0.5867146764930193 0.16922880449531472 1.0 ['ACTN3|p.G880E|1|0.61|ENSG00000248746|chr11:66563126-66563126|G/A|missense_variant'] 80783 9978 PLSQLWQNRPP True H1975_Epitope_Rep2 1334.70951901394 1334.70842993586 43.369 2 -0.586724268486048 0.16922880449531472 1.0 ['nc|ENSG00000066135|O75164-2|KDM4A', 'ENSG00000066135|ENST00000372396|KDM4A', 'KDM4A|p.K655Rfs*19|1|0.25|ENSG00000066135|chr1:43689017-43689018|-/GA|frameshift_variant'] 105860 14867 SVKKKKKRGK True NCI_RA007_Epitope_Rep4 1185.8033598291297 1185.80170490379 64.649 3 -0.5867330940307163 0.1692420662792925 1.0 ['ENSG00000055044|ENST00000264279|NOP58'] 57225 13698 LEFDFWRREH True PC9_epitope_Rep1 1433.6840325420899 1433.68292993586 57.541 2 -0.5867516594957969 0.16925262586597709 1.0 ['ENST00000520999.6_1_11:44881945-44919311:+|nuORF', 'ENST00000533080.5_1_11:44881945-44940814:+|nuORF', 'ENST00000533786.5_1_11:44881945-44931425:+|nuORF'] 34873 16903 GQVLHVVQAL True PC9_epitope_Rep5 1062.61857875122 1062.61748993586 70.032 2 -0.5867549870318644 0.16925262586597709 1.0 ['ENSG00000158092|ENST00000481752|NCK1', 'nc|ENSG00000158092|P16333-2|NCK1', 'NCK1-IL20RB|3|fusion', 'ENST00000482071.1_1_3:136664576-136665812:+|nuORF', 'NCK1-IL20RB|2|fusion'] 91950 12076 RPPLTTTATV True H1975_Epitope_Rep3 1055.5975089534702 1055.59640993586 51.614 2 -0.5867758921326038 0.16926318477844465 1.0 ['nc|ENSG00000136099|O95206-2|PCDH8', 'ENSG00000136099|ENST00000377942|PCDH8'] 55399 20226 LASVLLSLLL True PC9_epitope_Rep4 1040.6845330527199 1040.6834299358602 85.939 2 -0.5867863362875569 0.16926318477844465 1.0 ['ENSG00000127774|ENST00000248378|EMC6'] 30478 4957 GAGLPRHHSPR True H1975_Epitope_Rep3 1183.63227175275 1183.63116993586 24.195 2 -0.586845359357034 0.16928700260171425 1.0 ['ENST00000590265.5_1_19:1242319-1244433:+|nuORF', 'ENST00000592624.1_1_19:1242319-1242811:+|nuORF'] 66729 12018 LSTQSLIEL True PC9_epitope_Rep1 1002.5597264624199 1002.55862993586 51.089 2 -0.5868510402995931 0.16928700260171425 1.0 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'ENST00000466513.1_1_17:57742174-57744343:+|nuORF', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC'] 29109 6582 FTRITDRALYW True H1975_Epitope_Rep1 1440.75138382592 1440.74974490379 30.378 3 -0.5869249448002388 0.16928700260171425 1.0 ['nc|ENSG00000259024|Q96ET8|TVP23C'] 65276 9836 LSEIHSPNIQ True H1975_Epitope_Rep2 1136.58258716532 1136.5814899358602 42.82 2 -0.5869719428433345 0.1693294814294607 1.0 ['nc|ENSG00000163535|Q562F6-2|SGO2', 'ENSG00000163535|ENST00000357799|SGO2'] 17943 8061 EIEQGFLPK True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 35.95 2 -0.5869935942261529 0.1693294814294607 1.0 ['ENST00000503468.5_1_15:56126312-56207567:-|nuORF', 'ENSG00000069869|ENST00000435532|NEDD4', 'nc|ENSG00000069869|P46934-3|NEDD4', 'nc|ENSG00000069869|P46934-2|NEDD4', 'nc|ENSG00000069869|P46934|NEDD4'] 33850 18858 GLVLSLEEQL True PC9_epitope_Rep1 1099.61249031127 1099.6119749679299 77.321 1 -0.5870258329785863 0.16934003670896178 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 69259 24234 LVPAMLWGL True PC9_epitope_Rep3 998.5623097450599 998.56120993586 98.517 2 -0.5870285100734564 0.16934003670896178 1.0 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 44232 4626 ILSSSTSMQ True NCI_RA007_Epitope_Rep2 952.45354714172 952.45244993586 22.619 2 -0.5871009782944343 0.1693638481917712 1.0 ['ENST00000546388.1_1_12:56708731-56708785:-|nuORF'] 72572 7816 MVNYNPETV True PC9_epitope_Rep4 1065.48009624273 1065.47898993586 37.467 2 -0.5871160660726552 0.1693638481917712 1.0 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 82455 10831 PVDNLVIK True NCI_RA007_Epitope_Rep4 896.53311779176 896.53256496793 48.513 1 -0.5871202435561483 0.1693638481917712 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 58352 11709 LEVDSLAA True PC9_epitope_Rep2 816.4228986364399 816.42180993586 50.37 2 -0.5871541556817721 0.16937710464578112 1.0 ['ENST00000588460.5_1_17:74734290-74734425:+|nuORF'] 127795 16814 VRKSLGRG True H1975_Epitope_Rep1 871.5351834804299 871.53408993586 70.084 2 -0.5871847947491188 0.16940361628445125 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 138554 15914 YRNGENYRTD True NCI_RA007_Epitope_Rep5 1286.5639769790598 1286.5628699358601 67.941 2 -0.5871882054671781 0.16940361628445125 1.0 ['HEPH|p.A1019T|1|0.13|ENSG00000089472|chrX:66260118-66260118|G/A|missense_variant'] 68736 17623 LVDIYGSVP True H1975_Epitope_Rep2 961.51204799401 961.51094993586 73.104 2 -0.5873579147961362 0.16946474737480452 1.0 ['ENSG00000142619|ENST00000375460|PADI3', 'chr1:17249229-17259578|317|45.59|0.76|5.91|+|1|PADI3,PADI3|1'] 56542 16708 LDVFRNDTL True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 69.515 2 -0.5873671199573449 0.16946718368519317 1.0 ['SLITRK3|p.F145L|1|0.11|ENSG00000121871|chr3:165190396-165190396|G/T|missense_variant'] 134324 18443 WRWQLEEQRKR True NCI_RA007_Epitope_Rep1 1613.8538918318498 1613.85278993586 75.878 2 -0.5873790467504387 0.16946718368519317 1.0 ['TCHH|p.E881Q|1|0.21|ENSG00000159450|chr1:152110576-152110576|C/G|missense_variant'] 15369 3884 EALKFCEEFKE True NCI_RA007_Epitope_Rep2 1371.6380534361099 1371.63694993586 19.744 2 -0.5873824063862104 0.16946718368519317 1.0 ['ENSG00000124571|ENST00000265351|XPO5'] 9344 12364 AVTEDKYEI True PC9_epitope_Rep4 1066.51825557326 1066.51767496793 55.364 1 -0.5874059692634779 0.16946718368519317 1.0 ['nc|ENSG00000129351|Q12906-2|ILF3', 'nc|ENSG00000129351|Q12906-6|ILF3'] 64651 4402 LRHRFPLRMSR True NCI_RA007_Epitope_Rep2 1467.83573966991 1467.8341049037901 21.759 3 -0.587422876885332 0.16946718368519317 1.0 ['ENST00000471215.1_1_7:73111917-73112213:+|nuORF'] 18455 8412 EKIVRITWSNP True NCI_RA007_Epitope_Rep1 1341.7404847890498 1341.73882490379 36.723 3 -0.5874807410680297 0.16950153178452898 1.0 ['ENSG00000120053|ENST00000370508|GOT1', 'nc|ENSG00000120053|P17174-2|GOT1'] 124743 9324 VLKKKKKKKK True PC9_epitope_Rep2 1254.92274668582 1254.9211049037901 41.203 3 -0.5875296626876237 0.16950153178452898 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 27279 21338 FLYPFPLAL True NCI_RA007_Epitope_Rep3 1079.60555445603 1079.6044499358602 92.755 2 -0.5875453675448489 0.16950153178452898 1.0 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 67398 14942 LTDYRGKYL True PC9_epitope_Rep2 1127.5975089534697 1127.59640993586 62.735 2 -0.5875486413063523 0.16950153178452898 1.0 ['ENSG00000123131|ENST00000379341|PRDX4'] 65948 16277 LSLMDVMLV True PC9_epitope_Rep1 1019.5395256951499 1019.53842993586 67.429 2 -0.5875490462860674 0.16950153178452898 1.0 ['ENSG00000177462|ENST00000641945|OR2T8'] 28005 12434 FQWWGRWILHR True NCI_RA007_Epitope_Rep1 1583.8262205320298 1583.82512993586 52.342 2 -0.5876107297497467 0.16950937375349023 1.0 ['ENST00000469532.1_1_22:37628528-37640188:-|nuORF'] 110392 18694 TILRLLQQV True PC9_epitope_Rep6 1082.68117900778 1082.68008993586 84.549 2 -0.5876254864116977 0.16950937375349023 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'ENST00000369144.7_1_10:120819204-120820315:-|nuORF'] 95597 14880 SATISFYCRSR True H1975_Epitope_Rep1 1289.61865540421 1289.61754993586 62.47 2 -0.5876259324892308 0.16950937375349023 1.0 ['ENST00000434425.5_1_13:34404977-34405425:+|nuORF'] 128117 22276 VRRRRGRH True PC9_epitope_Rep4 1091.6649092937098 1091.6638099358602 93.923 2 -0.5876356945855242 0.16953046474895897 1.0 ['ENST00000370282.7_1_1:93645835-93645964:-|nuORF'] 84806 8670 QHISLLVKQVQ True NCI_RA007_Epitope_Rep1 1291.76122023363 1291.75957490379 37.728 3 -0.5876366234283605 0.16953046474895897 1.0 ['nc|ENSG00000198929|O75052-2|NOS1AP', 'nc|ENSG00000198929|O75052-3|NOS1AP', 'ENSG00000198929|ENST00000361897|NOS1AP'] 117649 11344 VAILTEAI True PC9_epitope_Rep2 828.49566965388 828.49456993586 48.955 2 -0.5876532231503071 0.16953046474895897 1.0 ['nc|ENSG00000131059|Q9BQP9-2|BPIFA3', 'ENSG00000131059|ENST00000375454|BPIFA3'] 120068 11645 VFFVCFVP True PC9_epitope_Rep2 956.4829967951998 956.48188993586 50.119 2 -0.5876648019797628 0.16953046474895897 1.0 ['ENSG00000174944|ENST00000309170|P2RY14'] 128116 22185 VRRRRGRH True PC9_epitope_Rep4 1091.6649092937098 1091.6638099358602 93.581 2 -0.5877072708633152 0.16955966815571155 1.0 ['ENST00000370282.7_1_1:93645835-93645964:-|nuORF'] 60278 17352 LIEKVSLIIF True PC9_epitope_Rep5 1173.7372969015698 1173.73564490379 71.742 3 -0.5877212264950579 0.16956750634143228 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 74300 10491 NIKEYRDSFSY True H1975_Epitope_Rep3 1420.6622940379998 1420.6611899358602 45.417 2 -0.5877301499601753 0.16956750634143228 1.0 ['ENST00000424738.1_1_10:117226695-117357303:+|nuORF', 'ENSG00000107518|ENST00000355044|ATRNL1'] 66029 7294 LSMSVTAYNR True H1975_Epitope_Rep3 1140.55974354576 1140.55864993586 33.031 2 -0.5877728814003076 0.16956750634143228 1.0 ['ENST00000502555.5_1_17:48244836-48246708:+|nuORF'] 126456 6735 VPLRWTQLMP True NCI_RA007_Epitope_Rep4 1239.67979910879 1239.67816490379 32.528 3 -0.5878188586272901 0.16959670729372728 1.0 ['ENST00000560002.5_1_15:56945693-56945987:-|nuORF'] 59480 11710 LGPAPTLQ True PC9_epitope_Rep6 795.4490538146299 795.44794993586 56.188 2 -0.5878260715227553 0.16960995453457764 1.0 ['ENST00000391694.4_1_19:58991128-58991158:+|nuORF'] 71023 5387 MESLLNRSKPS True H1975_Epitope_Rep3 1260.64962117932 1260.64798490379 25.786 3 -0.5880051066040278 0.16966293927164255 1.0 ['ENST00000579953.5_1_17:65124885-65124921:-|nuORF'] 125541 13993 VLWKLLDP True PC9_epitope_Rep2 982.5851533646198 982.58404993586 59.095 2 -0.5880403458594818 0.16966293927164255 1.0 ['ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF'] 125257 21818 VLRGSRHP True H1975_Epitope_Rep3 920.5304324531598 920.52932993586 91.217 2 -0.5880643521602995 0.16966293927164255 1.0 ['nc|ENSG00000187720|Q6ZMP0-2|THSD4', 'ENSG00000187720|ENST00000261862|THSD4'] 24659 6071 FASTNSIH True NCI_RA007_Epitope_Rep1 875.4137309350701 875.41262993586 27.652 2 -0.5880804988359724 0.16966293927164255 1.0 ['SLC35D3|p.D210N|1|0.4|ENSG00000182747|chr6:136924073-136924073|G/A|missense_variant'] 58151 18455 LESFPPFP True PC9_epitope_Rep1 932.4643695255999 932.46326993586 75.779 2 -0.5881524007130297 0.16970538035762708 1.0 ['ENST00000263354.7_1_19:47991268-47991526:-|nuORF'] 15009 4876 EAAAAAPAP True H1975_Epitope_Rep2 767.38136817763 767.3808149679301 23.842 1 -0.5881537649397471 0.16970538035762708 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4'] 85642 15316 QLQEEQRKKE True NCI_RA007_Epitope_Rep2 1314.6891774921799 1314.68808993586 64.271 2 -0.5882065304152343 0.1697129186602871 1.0 ['ENSG00000204006|ENST00000371759|C1orf185'] 90631 23521 RKKKRCRL True PC9_epitope_Rep6 1086.6920355583397 1086.6909299358601 103.61 2 -0.5882211539255711 0.1697129186602871 1.0 ['ENST00000494268.1_1_X:11778342-11782058:+|nuORF', 'ENST00000478462.5_1_X:11777869-11779061:+|nuORF', 'MSL3|p.L292Qfs*23|1|0.37|ENSG00000005302|chrX:11763904-11763907|CTTC/-|frameshift_variant', 'nc|ENSG00000005302|Q8N5Y2-5|MSL3', 'nc|ENSG00000005302|Q8N5Y2-2|MSL3', 'nc|ENSG00000005302|Q8N5Y2-3|MSL3', 'ENSG00000005302|ENST00000312196|MSL3'] 38471 5201 HGYTLSNSK True NCI_RA007_Epitope_Rep1 1005.48795850449 1005.48686993586 24.314 2 -0.5882373625647676 0.1697129186602871 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 83814 15356 QEERRWQLR True PC9_epitope_Rep1 1299.6796158679897 1299.67798490379 63.884 3 -0.5882519204746186 0.1697129186602871 1.0 ['ENST00000391759.5_2_19:54618770-54618941:-|nuORF'] 41381 13929 IAPGAELL True NCI_RA007_Epitope_Rep4 782.4538048418999 782.4532549679301 60.854 1 -0.588257648279955 0.1697129186602871 1.0 ['FAT2|p.T1572A|1|0.12|ENSG00000086570|chr5:151549370-151549370|T/C|missense_variant'] 15061 10715 EAAPHHQPP True H1975_Epitope_Rep2 982.4620781098199 982.46098993586 46.241 2 -0.5882944280027648 0.1697129186602871 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 136685 17180 YIFIMEML True H1975_Epitope_Rep3 1058.51806197458 1058.51747496793 71.72 1 -0.588343681233673 0.1697129186602871 1.0 ['SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A'] 112906 13273 TPQEKIFIAA True PC9_epitope_Rep4 1116.6179100448799 1116.6168099358601 58.95 2 -0.5883475376249003 0.1697129186602871 1.0 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7', 'ENST00000505692.1_1_4:122780107-122782831:-|nuORF', 'ENST00000502444.1_1_4:122782546-122791468:-|nuORF'] 66626 19003 LSSPYDVQKI True PC9_epitope_Rep5 1148.607739284 1148.60664993586 78.122 2 -0.5883522152532115 0.1697129186602871 1.0 ['nc|ENSG00000163701|Q8NFR9-3|IL17RE', 'ENSG00000163701|ENST00000383814|IL17RE', 'nc|ENSG00000163701|Q8NFR9-5|IL17RE', 'ENST00000489181.5_1_3:9944520-9950978:+|nuORF', 'nc|ENSG00000163701|Q8NFR9-4|IL17RE', 'ENST00000383815.7_1_3:9944714-9956386:+|nuORF', 'nc|ENSG00000163701|Q8NFR9-2|IL17RE'] 80245 8560 PLCRESQVELR True PC9_epitope_Rep4 1328.6870693172 1328.6854349037899 40.406 3 -0.5883614464596523 0.16972616066729398 1.0 ['ENST00000478558.1_1_1:153631578-153631665:+|nuORF'] 119973 9664 VEYVVYTDDP True H1975_Epitope_Rep1 1198.5393849406598 1198.5382899358601 42.098 2 -0.5884081658197957 0.1697394022519218 1.0 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 59250 12465 LGGPAASLSP True PC9_epitope_Rep1 868.46543215476 868.46432993586 52.812 2 -0.5884417432897127 0.16974993620821638 1.0 ['ENSG00000165684|ENST00000684778|SNAPC4'] 129077 6687 VTARDGGL True PC9_epitope_Rep1 787.4188163155098 787.41770993586 30.526 2 -0.5884475663639832 0.16974993620821638 1.0 ['PCDHA5|p.S431L|1|0.09|ENSG00000204965|chr5:140823067-140823067|C/T|missense_variant'] 134045 23784 WQGRRLAL True NCI_RA007_Epitope_Rep3 998.5773826455799 998.57628993586 103.08 2 -0.588498088515746 0.16978694903361613 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 74936 22221 NLTEARVRVWF True PC9_epitope_Rep5 1389.7517181790897 1389.7506299358602 90.478 2 -0.5884981720170479 0.16978694903361613 1.0 ['nc|ENSG00000164093|Q99697-3|PITX2', 'ENSG00000107859|ENST00000370002|PITX3', 'nc|ENSG00000164093|Q99697|PITX2', 'ENSG00000164093|ENST00000644743|PITX2'] 58400 9944 LEVPGLFWT True PC9_epitope_Rep5 1060.5593325395998 1060.55822993586 43.223 2 -0.5885455449406941 0.16978694903361613 1.0 ['nc|ENSG00000185436|Q8IU57-4|IFNLR1'] 57620 17941 LELQYSELF True PC9_epitope_Rep6 1140.5702911461199 1140.56918993586 81.637 2 -0.588546900219568 0.16978694903361613 1.0 ['nc|ENSG00000164989|Q6TFL3-3|CCDC171', 'ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171'] 21885 10890 ESEQIINWIS True NCI_RA007_Epitope_Rep3 1217.5928174958499 1217.59172993586 49.91 2 -0.5886043922779665 0.16981854131453902 1.0 ['ENST00000528149.5_1_11:82984858-82984906:-|nuORF'] 131676 23858 VWLRWFLWRLL True PC9_epitope_Rep4 1586.92380931498 1586.9221649037902 100.2 3 -0.5886174843832069 0.16981854131453902 1.0 ['ENST00000264649.10_1_17:40610912-40612943:+|nuORF'] 84401 6983 QGERLGVL True PC9_epitope_Rep4 870.4923156089399 870.49120993586 34.105 2 -0.5886240134317686 0.16981854131453902 1.0 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 57951 4585 LEQNNFSPNTR True NCI_RA007_Epitope_Rep2 1318.6265772356198 1318.62493490379 22.46 3 -0.5886649450722433 0.16981854131453902 1.0 ['ENSG00000205809|ENST00000381902|KLRC2'] 106580 8473 SVYDSVLQK True NCI_RA007_Epitope_Rep4 1037.5393253710097 1037.53822993586 39.398 2 -0.5886902650744104 0.16981854131453902 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 41901 10743 IDYRRWIKEKW True PC9_epitope_Rep1 1591.86233125723 1591.8606749037901 46.21 3 -0.5887233624218257 0.16981854131453902 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF', 'ENST00000505457.1_1_5:6749703-6750667:+|nuORF'] 134044 25098 WQGRRLAL True NCI_RA007_Epitope_Rep1 998.5773826455799 998.57628993586 103.87 2 -0.588735344411298 0.1698317786813362 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 40792 12543 HVGSGDLFSGM-[Oxidation] True PC9_epitope_Rep1 1121.48115925233 1121.48006993586 53.117 2 -0.5887819797325131 0.16986096052044136 1.0 ['ENSG00000158985|ENST00000505065|CDC42SE2'] 45762 3053 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 16.191 2 -0.58878455076413 0.16987419678874946 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 49090 13139 KFYLAFENSL True PC9_epitope_Rep6 1230.6284747285797 1230.62683490379 62.18 3 -0.5888843657544772 0.1699139030612245 1.0 ['ENSG00000156413|ENST00000318336|FUT6', 'ENSG00000171124|ENST00000303225|FUT3', 'nc|ENSG00000156413|P51993-2|FUT6', 'ENSG00000130383|ENST00000588525|FUT5'] 97157 17000 SFFYAQYCYL True H1975_Epitope_Rep3 1303.55834656343 1303.55724993586 70.984 2 -0.5889231025231692 0.1699139030612245 1.0 ['nc|ENSG00000196460|Q6ZV50|RFX8'] 25752 16138 FFPQIRIRD True PC9_epitope_Rep1 1190.6560268890998 1190.65438490379 66.89 3 -0.5889275035963986 0.1699139030612245 1.0 ['ENST00000493299.1_1_3:184038318-184039070:+|nuORF'] 22649 8926 ETRVIRWFDYL True H1975_Epitope_Rep3 1496.7775985737599 1496.77650993586 39.331 2 -0.5889466238866286 0.16992442843021588 1.0 ['nc|ENSG00000144191|Q16281-2|CNGA3', 'ENSG00000144191|ENST00000272602|CNGA3', 'nc|ENSG00000144191|Q16281-3|CNGA3'] 79717 5098 PHPSPPTPDS True NCI_RA007_Epitope_Rep1 1030.47197408718 1030.47086993586 23.915 2 -0.5889582964655771 0.16992442843021588 1.0 ['nc|ENSG00000165699|Q92574-2|TSC1', 'ENSG00000165699|ENST00000298552|TSC1'] 60884 20707 LKQTSRKKKKE True NCI_RA007_Epitope_Rep2 1372.8514322203598 1372.8503299358601 85.634 2 -0.5890031934559334 0.16995360553544953 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 44105 20644 ILMHCQTTL True PC9_epitope_Rep1 1058.5252726133401 1058.52416993586 84.228 2 -0.5890763682281982 0.17001466743192398 1.0 ['GAD2|p.G190Sfs*12|1|0.11|ENSG00000136750|chr10:26223932-26223936|TTGGA/-|frameshift_variant', 'ENSG00000136750|ENST00000376261|GAD2'] 58413 16145 LEVRYKFCR True PC9_epitope_Rep5 1212.6437479532399 1212.6426499358602 67.09 2 -0.5891699404814548 0.17008353526335926 1.0 ['ENST00000503914.1_1_4:128802289-128804548:+|nuORF'] 77314 13168 NYKKFYEQF True PC9_epitope_Rep2 1265.6080736371698 1265.60641490379 55.923 3 -0.5891701736875772 0.17008353526335926 1.0 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 15077 7526 EAAVTMVNYYT True NCI_RA007_Epitope_Rep1 1260.56963952312 1260.5685499358601 33.267 2 -0.5891978301758729 0.17008353526335926 1.0 ['nc|ENSG00000119314|O95758|PTBP3', 'nc|ENSG00000119314|O95758-5|PTBP3', 'nc|ENSG00000119314|O95758-7|PTBP3', 'nc|ENSG00000119314|O95758-1|PTBP3', 'ENSG00000119314|ENST00000374257|PTBP3', 'nc|ENSG00000119314|O95758-2|PTBP3', 'nc|ENSG00000119314|O95758-4|PTBP3'] 4708 10671 ALDSEDAPV True PC9_epitope_Rep3 915.4185415319898 915.41744993586 45.992 2 -0.5892310640793491 0.17008353526335926 1.0 ['nc|ENSG00000179886|Q53EQ6-2|TIGD5', 'ENSG00000179886|ENST00000504548|TIGD5'] 58579 8463 LFELYFSPFS True H1975_Epitope_Rep1 1248.60667665484 1248.60556993586 37.482 2 -0.5892473270089983 0.17009676545138613 1.0 ['ENST00000415251.6_1_7:77531138-77531189:+|nuORF'] 29742 17884 FVQHQKLHPV True PC9_epitope_Rep1 1231.6825759901099 1231.68094490379 73.583 3 -0.5892495035126007 0.17010728348025697 1.0 ['ENSG00000172888|ENST00000339296|ZNF621'] 45780 7867 ISNKTVAV True PC9_epitope_Rep5 830.4861675993399 830.48506993586 35.204 2 -0.5892531329615608 0.17010728348025697 1.0 ['NUP210L|p.Q1121K|1|0.36|ENSG00000143552|chr1:154054350-154054350|G/T|missense_variant'] 54951 11998 LAHEIGFG True PC9_epitope_Rep5 842.4286527232199 842.42754993586 51.145 2 -0.5892759757242332 0.1701150891063857 1.0 ['ENSG00000116288|ENST00000338639|PARK7', 'ENST00000446226.2_1_9:98680749-98680890:+|nuORF'] 45767 3399 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 17.907 2 -0.5893003901935292 0.1701150891063857 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 11213 13873 DELTPWIPV True H1975_Epitope_Rep2 1068.54916177872 1068.5480699358602 58.507 2 -0.5893196962170378 0.1701150891063857 1.0 ['nc|ENSG00000155275|Q8IYL2-2|TRMT44', 'ENSG00000155275|ENST00000389737|TRMT44', 'nc|ENSG00000155275|Q8IYL2-3|TRMT44', 'ENST00000532477.1_1_4:8456189-8477725:+|nuORF'] 17473 7221 EHGPENIVM-[Oxidation] True PC9_epitope_Rep1 1040.45969553176 1040.4585899358601 32.59 2 -0.5893310788864594 0.17014425759145613 1.0 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 116366 21155 TVYGGLMYI True PC9_epitope_Rep4 1015.50485443859 1015.5042749679301 89.535 1 -0.5893947807187289 0.17017817868868135 1.0 ['ENSG00000198642|ENST00000359039|KLHL9'] 127186 8342 VQFVPFRDYID True H1975_Epitope_Rep1 1397.6979512707296 1397.6968499358602 37.018 2 -0.589404185932521 0.17017817868868135 1.0 ['ENSG00000139117|ENST00000331366|CPNE8', 'ENST00000546603.5_1_12:39047686-39073432:-|nuORF', 'nc|ENSG00000139117|Q86YQ8-2|CPNE8'] 101190 15316 SLVTRGTR True PC9_epitope_Rep1 888.51411368268 888.5130099358599 63.733 2 -0.5894177331339764 0.17017817868868135 1.0 ['ENST00000329875.12_1_17:79890966-79891083:-|nuORF'] 108773 7928 TEPPKEGGEA True H1975_Epitope_Rep2 1013.4665543535698 1013.46544993586 35.44 2 -0.5894576657962751 0.17017817868868135 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF'] 93100 24191 RRRLWRWWKLQ True NCI_RA007_Epitope_Rep5 1682.9746161012197 1682.9735099358602 100.46 2 -0.589457666090966 0.17017817868868135 1.0 ['chr12:54283225-54283827|502|52.71|0.0|22.33|+|1|HNRNPA1,HNRNPA1|2'] 106298 4201 SVRGNLELRTR True NCI_RA007_Epitope_Rep4 1299.73713074411 1299.7354949037901 22.467 3 -0.5895173793430183 0.17017817868868135 1.0 ['ENST00000531243.2_1_1:40041622-40042411:-|nuORF'] 84282 8105 QEYKEAASSY True H1975_Epitope_Rep3 1174.5142328219797 1174.5131299358602 36.152 2 -0.589537370814752 0.17017817868868135 1.0 ['nc|ENSG00000065457|Q9BUB4-2|ADAT1', 'ENSG00000065457|ENST00000564657|ADAT1', 'ENST00000568478.1_1_16:75634116-75635755:-|nuORF'] 79771 8862 PHVLLATE True PC9_epitope_Rep6 878.4861675993401 878.48506993586 44.021 2 -0.5895425261118789 0.17017817868868135 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|164|3|sense'] 38949 10367 HIRQKIFKCP True PC9_epitope_Rep1 1268.7175815998398 1268.7164899358602 44.76 2 -0.5895611935025086 0.17017817868868135 1.0 ['ZNF200|p.E333Q|1|0.18|ENSG00000010539|chr16:3224083-3224083|C/G|missense_variant'] 85897 18946 QNLYQLQG True PC9_epitope_Rep2 962.48214484806 962.48159496793 78.241 1 -0.5895880501985462 0.17017817868868135 1.0 ['CFHR2|p.E185Q|1|0.39|ENSG00000080910|chr1:196958013-196958013|G/C|missense_variant'] 24700 13709 FAVFHPHFVL True PC9_epitope_Rep2 1212.64439957624 1212.64276490379 58.021 3 -0.5895880702880829 0.17017817868868135 1.0 ['ENSG00000147262|ENST00000682440|GPR119'] 26902 21978 FLGEFLRRI True PC9_epitope_Rep5 1149.66586329681 1149.66476993586 89.569 2 -0.5896504024109795 0.17018869127302863 1.0 ['nc|ENSG00000103534|Q6UXY8-4|TMC5', 'ENST00000567478.5_1_16:19467998-19503571:+|nuORF', 'nc|ENSG00000103534|Q6UXY8-3|TMC5', 'nc|ENSG00000103534|Q6UXY8-2|TMC5', 'ENSG00000103534|ENST00000542583|TMC5'] 61383 9667 LLELCVTEL True PC9_epitope_Rep2 1031.55728393427 1031.5561899358602 42.522 2 -0.589683652271888 0.17018869127302863 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000570209.1_1_15:31108772-31126588:+|nuORF'] 43722 12364 IISDPEYLL True PC9_epitope_Rep5 1061.56447748969 1061.5633899358602 52.553 2 -0.5897339390451414 0.17021785207732393 1.0 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D', 'nc|ENSG00000168918|Q92835-3|INPP5D'] 25981 13835 FGYPKFISHQD True PC9_epitope_Rep2 1337.6404363946099 1337.6393299358601 58.5 2 -0.5898318168402528 0.17024701195219125 1.0 ['nc|ENSG00000076604|Q9BUZ4-2|TRAF4', 'ENSG00000076604|ENST00000262395|TRAF4'] 22860 6520 EVEPGCHHIPQ True NCI_RA007_Epitope_Rep1 1244.5608061749201 1244.5597099358602 29.376 2 -0.5898845452164527 0.170257521672616 1.0 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000565298.5_1_16:1576517-1634259:-|nuORF', 'ENST00000561954.1_1_16:1607934-1614087:-|nuORF'] 66930 13223 LSYHRMWMVRW True NCI_RA007_Epitope_Rep1 1563.75912914199 1563.7580299358601 55.431 2 -0.5898969012478811 0.170257521672616 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 118877 11338 VEEMYEAHA True H1975_Epitope_Rep3 1077.44371073401 1077.4426099358602 48.722 2 -0.5899529941326227 0.17030261501442162 1.0 ['nc|ENSG00000138496|Q8IXQ6-3|PARP9', 'ENSG00000138496|ENST00000682323|PARP9', 'nc|ENSG00000138496|Q8IXQ6|PARP9', 'ENST00000489652.1_1_3:122255723-122264321:-|nuORF'] 54929 13700 LAGSLGAPL True NCI_RA007_Epitope_Rep4 797.46470387877 797.46360993586 59.921 2 -0.5900640280729688 0.1703317716798929 1.0 ['ENST00000336798.11_2_1:31344561-31344780:-|nuORF'] 74348 9999 NIQHFRVLF True PC9_epitope_Rep6 1172.6454622053998 1172.6438249037901 49.021 3 -0.590210544464212 0.1703741474918733 1.0 ['ENST00000503808.5_1_4:57204874-57250274:-|nuORF', 'nc|ENSG00000157426|Q4L235-4|AASDH', 'AASDH|p.L440Wfs*43|1|0.53|ENSG00000157426|chr4:56354103-56354103|A/-|frameshift_variant', 'nc|ENSG00000157426|Q4L235-3|AASDH', 'nc|ENSG00000157426|Q4L235-2|AASDH', 'ENSG00000157426|ENST00000205214|AASDH', 'AASDH|p.V216L|1|0.15|ENSG00000157426|chr4:56378170-56378170|C/A|missense_variant'] 18421 10247 EKETIKAAL True NCI_RA007_Epitope_Rep3 1001.5757108797297 1001.5746099358599 47.383 2 -0.5902150199538126 0.1703741474918733 1.0 ['INPP1|p.D316Efs*2|1|0.28|ENSG00000151689|chr2:190371146-190371188|GGGACTCTTGTGCTGCTCATGCCATACTGAGGGCCATGGGTGG/-|frameshift_variant', 'ENSG00000151689|ENST00000392329|INPP1'] 96785 7077 SERDMKVV True PC9_epitope_Rep2 962.4855159763399 962.48440993586 32.619 2 -0.5902588449690502 0.17038736714629443 1.0 ['ENST00000338274.4_1_2:26033192-26033372:-|nuORF'] 15584 3358 EATLSWLANCK True NCI_RA007_Epitope_Rep2 1234.60160835774 1234.59997490379 17.721 3 -0.5903454777295807 0.17042973916091717 1.0 ['FRY|p.M2908Cfs*5|1|0.3|ENSG00000073910|chr13:32294509-32294509|A/-|frameshift_variant', 'ENSG00000073910|ENST00000542859|FRY'] 33499 12776 GLGVEQLP True PC9_epitope_Rep1 811.4439684341899 811.44286993586 54.017 2 -0.590400866326462 0.17042973916091717 1.0 ['ENSG00000169710|ENST00000306749|FASN'] 33109 7479 GKKSGFVN True NCI_RA007_Epitope_Rep1 835.45520182423 835.45410993586 33.083 2 -0.5904143403429221 0.1704429572976418 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 126464 11833 VPLSTGKVP True PC9_epitope_Rep2 896.5331177917599 896.53202993586 50.846 2 -0.5904641141072584 0.1704561750131451 1.0 ['ENST00000257570.9_1_12:121458212-121458344:-|nuORF'] 119864 18460 VEVSLGLPAL True PC9_epitope_Rep5 996.5855472874398 996.58444993586 76.028 2 -0.5905047068530737 0.17046939230744718 1.0 ['ENST00000441394.1_1_13:30881052-30881121:-|nuORF'] 19801 12491 ELTKKHWDL True PC9_epitope_Rep5 1168.62405805448 1168.62296993586 53.045 2 -0.5905655257452527 0.17047174470661336 1.0 ['ENSG00000214946|ENST00000437605|TBC1D26'] 93146 23887 RRRRLVFLWWP True PC9_epitope_Rep3 1583.9313543069097 1583.9296949037898 97.168 3 -0.5905906949391149 0.17047174470661336 1.0 ['nc|ENSG00000187260|Q86TI4-4|WDR86'] 135947 7546 YEYERKKHEEL True NCI_RA007_Epitope_Rep1 1522.7416069878598 1522.74050993586 33.346 2 -0.5906251464039379 0.17047174470661336 1.0 ['nc|ENSG00000174501|Q5JPF3|ANKRD36C', 'ENSG00000174501|ENST00000295246|ANKRD36C'] 104837 5054 STEIQTTIR True NCI_RA007_Epitope_Rep3 1047.5560380643099 1047.5549499358601 26.875 2 -0.5906418738608408 0.17047174470661336 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|107|2|sense'] 12224 6766 DIPSRRDEGK True NCI_RA007_Epitope_Rep1 1171.5945488313498 1171.59344993586 30.328 2 -0.5908493828313793 0.17047174470661336 1.0 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 107472 6961 TAAAEQLSP True H1975_Epitope_Rep2 886.4396113297399 886.4390649679301 31.695 1 -0.590892939916255 0.17049817585113672 1.0 ['ENSG00000165556|ENST00000381020|CDX2'] 134270 5854 WRRWCWRWPWR True NCI_RA007_Epitope_Rep1 1772.8735221609597 1772.87188490379 26.823 3 -0.5909222123648981 0.17049817585113672 1.0 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 82928 18310 PWLAECTPI True H1975_Epitope_Rep2 1028.50010341132 1028.4990099358602 75.929 2 -0.590932946138981 0.17051139079177952 1.0 ['nc|ENSG00000070961|P20020-6|ATP2B1', 'ENSG00000070961|ENST00000428670|ATP2B1', 'nc|ENSG00000070961|P20020-4|ATP2B1', 'nc|ENSG00000070961|P20020-1|ATP2B1', 'nc|ENSG00000070961|P20020-5|ATP2B1', 'nc|ENSG00000070961|P20020-2|ATP2B1'] 97178 10485 SFHSLSLDP True H1975_Epitope_Rep2 1001.4818104948899 1001.48070993586 45.348 2 -0.5910851372278798 0.17058832900543244 1.0 ['ENST00000543253.5_1_X:101969373-101969559:+|nuORF'] 66609 7683 LSSPETGKYSE True H1975_Epitope_Rep1 1196.55609763396 1196.5550099358602 34.518 2 -0.5911575699419963 0.17061475475124654 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 100648 10438 SLQSRTGHTH True PC9_epitope_Rep1 1122.55301837254 1122.55138490379 45.037 3 -0.591183596506477 0.17061475475124654 1.0 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 84366 14445 QGAGSVLF True PC9_epitope_Rep6 777.40210362221 777.40100993586 67.453 2 -0.5912289097795352 0.17067031986746528 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 5317 21513 ALSGRDMIGI True PC9_epitope_Rep4 1031.54336520563 1031.54226993586 90.929 2 -0.5912306779376227 0.17067031986746528 1.0 ['ENSG00000198231|ENST00000389924|DDX42', 'nc|ENSG00000198231|Q86XP3-2|DDX42'] 124671 23591 VLILILCLKV True PC9_epitope_Rep6 1125.75592417117 1125.75427490379 103.89 3 -0.5912479685175084 0.17067031986746528 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 6933 15608 AQLHWILV True NCI_RA007_Epitope_Rep5 978.5650866263799 978.56398993586 66.745 2 -0.5912666506949082 0.17068081174933894 1.0 ['ENSG00000112309|ENST00000230053|B3GAT2'] 62214 7044 LLPSEHYVQS True NCI_RA007_Epitope_Rep4 1171.58733819259 1171.58624993586 33.721 2 -0.5912669639938486 0.17068081174933894 1.0 ['ENST00000396862.1_1_16:3350967-3351225:-|nuORF'] 128840 20927 VSSICAIQVGI True PC9_epitope_Rep5 1088.58998104488 1088.5888899358602 85.553 2 -0.5913561964800974 0.17069402188629956 1.0 ['ENSG00000149054|ENST00000278319|ZNF215'] 19276 11181 ELLQDEETLLS True NCI_RA007_Epitope_Rep5 1288.63982725792 1288.63872993586 49.642 2 -0.5913917589777385 0.1707231602421153 1.0 ['nc|ENSG00000043143|Q9NQC1-2|JADE2', 'nc|ENSG00000043143|Q9NQC1|JADE2', 'ENSG00000043143|ENST00000681547|JADE2'] 133748 27406 WLLKRLKAKKP True PC9_epitope_Rep3 1379.9129102781098 1379.91127490379 112.98 3 -0.5914952360254454 0.17073636928370048 1.0 ['ENST00000373465.2_1_X:46278605-46278842:-|nuORF'] 45768 3472 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 18.244 2 -0.5915486188557232 0.1707414191287728 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 40645 10780 HTHSRELWRSW True H1975_Epitope_Rep3 1493.7276286895699 1493.72652993586 46.545 2 -0.5915525489541723 0.1707414191287728 1.0 ['ENST00000420607.6_1_1:76198563-76199237:+|nuORF'] 99671 2622 SLGARVEQRL True NCI_RA007_Epitope_Rep3 1127.64110510095 1127.63944490379 14.775 3 -0.5915660143402175 0.1707414191287728 1.0 ['ENSG00000171811|ENST00000368586|CFAP46'] 82590 7651 PVIHSAPGSAP True H1975_Epitope_Rep3 1031.5399940773498 1031.5388899358602 34.411 2 -0.5915750563189819 0.1707414191287728 1.0 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4', 'ENST00000466440.1_1_1:52890958-52897138:-|nuORF'] 134752 13563 WWWWIWWQWW True PC9_epitope_Rep2 1747.7877097649898 1747.78660993586 57.461 2 -0.5917638433949022 0.170770553945147 1.0 ['chr12:54282841-54283827|502|22.89|0.0|21.13|+|1|HNRNPA1,HNRNPA1|1'] 57087 18129 LEELHCATG True PC9_epitope_Rep1 971.43823143075 971.43712993586 74.524 2 -0.5917712337347653 0.17078376096962747 1.0 ['nc|ENSG00000077942|P23142-2|FBLN1', 'nc|ENSG00000077942|P23142-3|FBLN1', 'nc|ENSG00000077942|P23142-4|FBLN1', 'ENSG00000077942|ENST00000327858|FBLN1', 'CON__ENSEMBL:ENSBTAP00000016046'] 30744 6810 GANSNSPEF True NCI_RA007_Epitope_Rep3 921.38282472961 921.38172993586 33.891 2 -0.5918563672875475 0.17081017375654972 1.0 ['FAT1|p.P460S|1|0.39|ENSG00000083857|chr4:186708450-186708450|G/A|missense_variant'] 7064 5634 AQVLHVPS True PC9_epitope_Rep5 849.47085188837 849.46974993586 26.671 2 -0.5918606597319823 0.17081017375654972 1.0 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 115924 23810 TVPLDLLLVP True PC9_epitope_Rep2 1078.66379760814 1078.66327496793 97.055 1 -0.5919202708059791 0.17085251071013363 1.0 ['ENST00000501133.2_1_4:103749296-103764608:+|nuORF'] 111743 6294 TLQEVVTE True NCI_RA007_Epitope_Rep2 917.4705771048499 917.46948993586 29.088 2 -0.591920830892437 0.17085251071013363 1.0 ['nc|ENSG00000127946|O00291-3|HIP1', 'ENSG00000127946|ENST00000336926|HIP1', 'nc|ENSG00000127946|O00291-4|HIP1'] 100655 11755 SLQSVRSSF True PC9_epitope_Rep4 1009.51925863277 1009.51816993586 52.977 2 -0.5919860971303098 0.1708975665689897 1.0 ['ENSG00000129646|ENST00000680821|QRICH2'] 84262 5804 QEWKDKAQNLY True H1975_Epitope_Rep3 1421.6939285194496 1421.6922749037901 27.348 3 -0.5920887672884618 0.17094262099278582 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 99489 7260 SLEQMEHP True NCI_RA007_Epitope_Rep3 969.4225813666098 969.42148993586 35.668 2 -0.5921464783132699 0.17095310136157338 1.0 ['ENSG00000178404|ENST00000322630|CEP295NL'] 57772 5636 LENYYSLPG True NCI_RA007_Epitope_Rep5 1054.49712620586 1054.4960299358602 28.366 2 -0.59216198764811 0.17095310136157338 1.0 ['MYF5|p.V142L|1|0.37|ENSG00000111049|chr12:80717487-80717487|G/T|missense_variant'] 13558 12754 DPLPWNLLS True PC9_epitope_Rep1 1053.54949613189 1053.54838993586 53.932 2 -0.5921754988018627 0.17096085862607088 1.0 ['ENST00000548334.5_1_12:49959983-49961499:-|nuORF'] 12249 7214 DIRGFVAA True PC9_epitope_Rep3 847.4552018242299 847.45410993586 32.76 2 -0.5921833193596494 0.17096085862607088 1.0 ['ENSG00000025708|ENST00000252029|TYMP', 'nc|ENSG00000025708|P19971-2|TYMP', 'ENST00000487162.1_1_22:50967616-50968379:-|nuORF', 'ENST00000476284.1_1_22:50964673-50968379:-|nuORF'] 59417 12842 LGLTDHAEL True PC9_epitope_Rep2 967.49746055903 967.49636993586 54.698 2 -0.5921916225623384 0.17096085862607088 1.0 ['OR5J2|p.L163Ffs*8|1|0.3|ENSG00000174957|chr11:56177103-56177104|-/T|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 84355 20783 QGAFGYVL True PC9_epitope_Rep5 853.4334037504899 853.4328549679301 84.993 1 -0.5922221684581974 0.17097133757961783 1.0 ['ENSG00000010270|ENST00000009041|STARD3NL', 'nc|ENSG00000010270|O95772-2|STARD3NL'] 55920 7246 LDGSRLIK True PC9_epitope_Rep2 900.5392658013599 900.53816993586 33.26 2 -0.5922337180571952 0.17097133757961783 1.0 ['ENSG00000171863|ENST00000645674|RPS7', 'ENST00000444127.1_1_1:68708159-68708657:-|nuORF'] 48963 11086 KEYVKWMMYWI True PC9_epitope_Rep5 1575.76181448059 1575.76015490379 47.63 3 -0.5923328821548415 0.17101638508940942 1.0 ['nc|ENSG00000132563|Q9BRK0|REEP2', 'ENSG00000132563|ENST00000378339|REEP2', 'ENST00000464751.6_1_5:137774897-137779354:+|nuORF', 'nc|ENSG00000068615|Q9H902-4|REEP1', 'ENST00000510467.5_1_5:137774897-137780649:+|nuORF', 'nc|ENSG00000068615|Q9H902|REEP1', 'nc|ENSG00000068615|Q9H902-3|REEP1', 'ENSG00000068615|ENST00000538924|REEP1'] 80973 16141 PNIFEMLQERQ True NCI_RA007_Epitope_Rep2 1403.68673496403 1403.68562993586 67.511 2 -0.592372218518614 0.17105870738658982 1.0 ['nc|ENSG00000002746|Q76N89-2|HECW1', 'HECW1|p.S1539Kfs*53|2|0.23|ENSG00000002746|chr7:43554695-43554696|-/A|frameshift_variant', 'ENSG00000002746|ENST00000395891|HECW1'] 69988 19040 LYFFSSFLQN True PC9_epitope_Rep6 1264.6128246644398 1264.61172993586 85.882 2 -0.5923766951102588 0.17105870738658982 1.0 ['ENST00000560014.5_1_15:60678230-60678305:-|nuORF'] 4493 21648 AKKIKRPKFTV True NCI_RA007_Epitope_Rep5 1314.8499756683798 1314.84832490379 90.361 3 -0.5924194878480077 0.17108782880071333 1.0 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT', 'nc|ENSG00000205221|Q6UXI7-3|VIT'] 90923 7011 RLEKKSFEKAP True NCI_RA007_Epitope_Rep2 1331.75613485319 1331.7544949037901 31.894 3 -0.5924482659219321 0.17111150031047495 1.0 ['ENSG00000140943|ENST00000343411|MBTPS1'] 100525 16964 SLPSIFGSHW True PC9_epitope_Rep1 1129.5556441414901 1129.55398490379 70.074 3 -0.5924503740620083 0.17111150031047495 1.0 ['ENST00000587091.5_2_X:73751613-73751946:+|nuORF'] 41314 14794 IAISSTLKSLL True PC9_epitope_Rep4 1144.70672504928 1144.70562993586 64.844 2 -0.5924657635733483 0.17111150031047495 1.0 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 35179 8038 GSDFDC[Carbamidomethyl]ELR True NCI_RA007_Epitope_Rep1 1097.4447736425998 1097.44366993586 35.263 2 -0.5924907483463734 0.171140619029423 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 134646 5852 WWHRDSLWDRR True NCI_RA007_Epitope_Rep3 1611.7807268915897 1611.7790849037901 29.996 3 -0.5926021823575104 0.17116973682115622 1.0 ['ENST00000511866.6_1_4:16191890-16198306:-|nuORF'] 107491 8977 TAAHGLEL True PC9_epitope_Rep2 810.42356734278 810.42246993586 39.885 2 -0.5926242532939175 0.17117748200980704 1.0 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 35222 7579 GSGVGTVRL True H1975_Epitope_Rep2 844.4766655447999 844.47556993586 34.104 2 -0.5926521161324639 0.17117748200980704 1.0 ['nc|ENSG00000105875|A4D1P6-2|WDR91', 'ENSG00000105875|ENST00000354475|WDR91'] 85894 13991 QNLLLELRNY True H1975_Epitope_Rep3 1274.6982856239 1274.69718993586 59.135 2 -0.5926674738471089 0.17117748200980704 1.0 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000561853.1_1_16:56536201-56536626:-|nuORF', 'ENST00000565781.5_1_16:56536201-56536402:-|nuORF'] 64320 21847 LQMRRQQP True H1975_Epitope_Rep2 1055.56583198571 1055.5647299358602 90.343 2 -0.5927106392839449 0.17120387174833634 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ADGRB1|p.D708Tfs*49|1|0.15|ENSG00000181790|chr8:142481700-142481700|G/-|frameshift_variant'] 62626 9271 LLVPDVAK True NCI_RA007_Epitope_Rep2 853.5273041353299 853.52620993586 40.672 2 -0.5927311882185665 0.17120387174833634 1.0 ['nc|ENSG00000170476|Q8WU39-2|MZB1'] 591 10859 AASACASTQVP True PC9_epitope_Rep2 1004.45969515132 1004.45858993586 47.087 2 -0.5928176832406552 0.17123298575181087 1.0 ['ENST00000609111.1_1_10:88728383-88728773:-|nuORF'] 68970 6834 LVGGFSCS True NCI_RA007_Epitope_Rep2 768.3476255212 768.3470749679301 31.199 1 -0.5929347281414994 0.171262098828324 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 4460 5025 AKELSAVHSSH True H1975_Epitope_Rep3 1164.58873517492 1164.5876299358601 24.45 2 -0.5929652516625412 0.17127529172039416 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 115185 5426 TVARSPVAP True PC9_epitope_Rep4 896.5079656730799 896.50686993586 27.604 2 -0.5930082853974159 0.17128848419242892 1.0 ['ENSG00000197063|ENST00000357736|MAFG'] 65552 5149 LSGEDYRWWWR True NCI_RA007_Epitope_Rep4 1552.7211463268 1552.7194949037903 26.33 3 -0.5930328767873599 0.1712962226007227 1.0 ['ENSG00000100926|ENST00000261789|TM9SF1'] 97191 10896 SFIPLGHMLT True H1975_Epitope_Rep3 1114.58450174162 1114.5834099358601 46.996 2 -0.5930489239305035 0.1712962226007227 1.0 ['ENSG00000154237|ENST00000388948|LRRK1', 'ENST00000525284.5_1_15:101565016-101602660:+|nuORF'] 30785 9490 GAPHEVAVE True PC9_epitope_Rep5 907.4399456829099 907.43884993586 41.46 2 -0.5931073829739759 0.1712962226007227 1.0 ['SEC14L5|p.S622Afs*14|2|0.22|ENSG00000103184|chr16:5011151-5011151|C/-|frameshift_variant', 'ENSG00000103184|ENST00000251170|SEC14L5'] 43888 17126 ILDHVSDSF True PC9_epitope_Rep4 1031.49237517859 1031.4912699358601 73.877 2 -0.5931199310947852 0.1713094138995893 1.0 ['CTNNA3|p.I382L|1|0.32|ENSG00000183230|chr10:66766401-66766401|T/A|missense_variant'] 84363 15294 QGAGSVLF True PC9_epitope_Rep4 777.40210362221 777.40100993586 66.759 2 -0.593155668201724 0.1713198777537247 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 8445 4983 ATSNTEENDID True H1975_Epitope_Rep2 1207.48405489251 1207.48294993586 24.25 2 -0.5932127776365909 0.1713198777537247 1.0 ['ENSG00000108395|ENST00000262294|TRIM37', 'nc|ENSG00000108395|O94972-3|TRIM37', 'nc|ENSG00000108395|O94972-2|TRIM37'] 18580 20583 ELAAQIIQEED True PC9_epitope_Rep2 1257.60886148281 1257.60776993586 84.605 2 -0.5932453053588334 0.17133306804615997 1.0 ['ENST00000473758.5_1_14:23533663-23536544:-|nuORF'] 47286 6950 IYFFYNCQYSS True H1975_Epitope_Rep3 1433.59618862413 1433.5950899358602 31.695 2 -0.5932721599275568 0.17134353064765148 1.0 ['ENST00000373864.5_1_1:28339722-28384581:-|nuORF'] 3177 11779 AGEIDLQILSK True NCI_RA007_Epitope_Rep1 1185.6605031328497 1185.6594099358601 49.796 2 -0.5933030424410164 0.17134353064765148 1.0 ['ENST00000467390.5_1_2:138722061-138759907:+|nuORF', 'HNMT|p.Q192Rfs*20|1|0.23|ENSG00000150540|chr2:138013819-138013819|T/-|frameshift_variant', 'ENSG00000150540|ENST00000280097|HNMT'] 92394 20440 RQRPQKPAAL True NCI_RA007_Epitope_Rep5 1163.6887239997097 1163.68762993586 85.561 2 -0.5933882715626732 0.17140947288006111 1.0 ['SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A'] 55722 11096 LDDNDNRPI True PC9_epitope_Rep1 1070.4992514641801 1070.49814993586 47.568 2 -0.5934109667006298 0.17140947288006111 1.0 ['PCDHB1|p.M561I|1|0.21|ENSG00000171815|chr5:141053153-141053153|G/A|missense_variant'] 64902 7492 LSAVDGTVTL True H1975_Epitope_Rep1 974.52842633414 974.5273299358599 33.814 2 -0.5934164380832149 0.17140947288006111 1.0 ['ENST00000490941.1_1_3:170670926-170671100:-|nuORF', 'nc|ENSG00000118263|O75840-3|KLF7', 'nc|ENSG00000118263|O75840-2|KLF7', 'nc|ENSG00000118263|O75840-4|KLF7', 'ENSG00000118263|ENST00000309446|KLF7'] 94310 27153 RWTHLLRLLRH True H1975_Epitope_Rep2 1499.89496879819 1499.89333490379 112.13 3 -0.5934271140366519 0.17140947288006111 1.0 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 31829 16290 GENPLQVLV True H1975_Epitope_Rep1 967.5338460677499 967.53274993586 68.013 2 -0.5934780609057757 0.17140947288006111 1.0 ['ENSG00000083845|ENST00000196551|RPS5', 'ENST00000414617.1_1_21:34853889-34854420:-|nuORF', 'ENST00000598807.1_1_19:58899504-58905010:+|nuORF'] 94309 27085 RWTHLLRLLRH True H1975_Epitope_Rep2 1499.89496879819 1499.89333490379 111.8 3 -0.5934961788660992 0.17142266006716217 1.0 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 136690 17302 YIGGTQIIPF True PC9_epitope_Rep2 1107.5964463243097 1107.5953499358602 71.811 2 -0.5936496755675739 0.17151542158703886 1.0 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47'] 14560 21683 DVEEAVSKWL True PC9_epitope_Rep3 1174.5870038394198 1174.5859099358602 88.701 2 -0.5937564000224549 0.171544521365481 1.0 ['HMCES|p.G219V|1|0.39|ENSG00000183624|chr3:129301970-129301970|G/T|missense_variant'] 30575 5035 GAKKKKKKKK True NCI_RA007_Epitope_Rep2 1170.8288463009796 1170.82720490379 24.21 3 -0.5937953792255924 0.171546785486951 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 88735 16195 RDDFYEWE True H1975_Epitope_Rep3 1158.4618033263 1158.46015490379 67.75 3 -0.5938175099471855 0.171546785486951 1.0 ['ENSG00000120658|ENST00000690772|ENOX1', 'nc|ENSG00000120658|Q8TC92-2|ENOX1'] 114508 7698 TSFWPMSP True H1975_Epitope_Rep2 951.4160394341899 951.41494993586 34.565 2 -0.5938241123040858 0.171546785486951 1.0 ['ENSG00000273820|ENST00000621775|USP27X'] 74916 11118 NLSKEKTEWHV True NCI_RA007_Epitope_Rep1 1369.6990138998901 1369.69790993586 47.247 2 -0.5938313836719952 0.171546785486951 1.0 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C'] 78820 19198 PEPKSQRDSAL True PC9_epitope_Rep6 1226.62551460646 1226.62387490379 86.498 3 -0.5938528046014622 0.171546785486951 1.0 ['ENSG00000163064|ENST00000295206|EN1'] 6996 5732 AQQMQFMFPG True PC9_epitope_Rep2 1183.5154362056298 1183.5143299358601 27.439 2 -0.5938935564224449 0.17155996881017171 1.0 ['ENSG00000139793|ENST00000679496|MBNL2', 'nc|ENSG00000139793|Q5VZF2-3|MBNL2', 'nc|ENSG00000139793|Q5VZF2|MBNL2', 'nc|ENSG00000139793|Q5VZF2-2|MBNL2'] 94311 26922 RWTHLLRLLRH True H1975_Epitope_Rep3 1499.89496879819 1499.89333490379 112.63 3 -0.5939720127218596 0.17158906463829923 1.0 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 62054 7030 LLMCRDIP True NCI_RA007_Epitope_Rep1 959.4932442090699 959.49214993586 31.342 2 -0.5940019761630464 0.17159951626249126 1.0 ['ENST00000312629.9_1_11:67201493-67201693:+|nuORF'] 140075 10359 YVMELPKLK True NCI_RA007_Epitope_Rep3 1119.63620296131 1119.63510993586 47.81 2 -0.5940376602824894 0.17159951626249126 1.0 ['nc|ENSG00000080823|Q9UQ07-5|MOK', 'nc|ENSG00000080823|Q9UQ07-6|MOK', 'ENSG00000080823|ENST00000361847|MOK', 'ENST00000521249.1_1_14:102695628-102696024:-|nuORF', 'ENST00000521766.5_1_14:102695648-102699035:-|nuORF'] 107738 7534 TALRDFKTTRR True H1975_Epitope_Rep1 1363.76843087239 1363.76677490379 33.974 3 -0.5940526676827814 0.17161269790755032 1.0 ['nc|ENSG00000105784|Q96NL0-2|RUNDC3B', 'nc|ENSG00000105784|Q96NL0-4|RUNDC3B', 'ENSG00000105784|ENST00000394654|RUNDC3B', 'nc|ENSG00000105784|Q96NL0|RUNDC3B'] 138085 6596 YQEGQVSA True PC9_epitope_Rep2 880.3926611373199 880.39156993586 30.784 2 -0.5940616995464941 0.17162587913311905 1.0 ['ENSG00000130487|ENST00000648057|KLHDC7B'] 4320 6262 AILRRNWNQYK True NCI_RA007_Epitope_Rep5 1460.80006535384 1460.79841490379 30.764 3 -0.5942506319450357 0.17173452989005045 1.0 ['ENSG00000064989|ENST00000392370|CALCRL'] 126229 15164 VPGVAVAEP True PC9_epitope_Rep1 837.45961849833 837.45852993586 63.15 2 -0.5943523819631568 0.17174224343675418 1.0 ['ENST00000337288.9_2_2:96874364-96874412:-|nuORF'] 65835 12329 LSKMAQRPYQ True PC9_epitope_Rep4 1220.63357719236 1220.63194490379 55.233 3 -0.5943886023605243 0.17174224343675418 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2'] 130207 5680 VTSDVLEQR True NCI_RA007_Epitope_Rep3 1045.54038800017 1045.53928993586 29.324 2 -0.5943961514583456 0.17174224343675418 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5'] 93105 23596 RRRPHLFRRHF True NCI_RA007_Epitope_Rep3 1576.9075991705602 1576.9065099358602 102.35 2 -0.5944152007933537 0.17175542155256082 1.0 ['HNRNPDL|p.D84H|1|0.31|ENSG00000152795|chr4:82429441-82429441|C/G|missense_variant'] 128247 7268 VRWLRFWLLFW True NCI_RA007_Epitope_Rep3 1620.9081592508396 1620.9070699358601 35.699 2 -0.5945515542459121 0.17182950694477592 1.0 ['ENST00000531894.5_1_16:70011782-70023933:-|nuORF'] 18226 9464 EIRSYRAP True PC9_epitope_Rep3 990.5246783663798 990.52358993586 41.352 2 -0.594563696686929 0.17182950694477592 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1'] 97187 8841 SFIGNTGP True PC9_epitope_Rep1 791.38136817763 791.38026993586 38.849 2 -0.5946230138819473 0.17183721522209494 1.0 ['ENSG00000116918|ENST00000366639|TSNAX'] 72865 12775 NAQFKSLV True PC9_epitope_Rep3 905.4970666362099 905.49596993586 54.159 2 -0.5946421595619107 0.17183721522209494 1.0 ['ENST00000533507.5_1_11:47602194-47606030:+|nuORF', 'nc|ENSG00000213619|O75489-2|NDUFS3', 'ENSG00000213619|ENST00000263774|NDUFS3'] 115311 13767 TVDQAVETY True H1975_Epitope_Rep1 1024.47130538084 1024.4707749679299 58.098 1 -0.5946597003768687 0.17183721522209494 1.0 ['nc|ENSG00000132361|O75153|CLUH', 'ENSG00000132361|ENST00000651024|CLUH', 'ENST00000574210.5_1_17:2597327-2598221:-|nuORF'] 48733 11980 KENYKLLL True NCI_RA007_Epitope_Rep4 1019.6015317047498 1019.60042993586 53.085 2 -0.5947446410490266 0.17186629969613568 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|22|1|sense'] 115504 14934 TVGIQFRRW True PC9_epitope_Rep5 1161.6407111781298 1161.63960993586 62.448 2 -0.594756398260229 0.17187947437080403 1.0 ['ENST00000393328.6_1_17:47677417-47677549:-|nuORF'] 13487 18973 DPEDLCTFAYI True H1975_Epitope_Rep2 1285.5536551058099 1285.55254993586 78.755 2 -0.5947761414091518 0.17189264862629058 1.0 ['ENSG00000064999|ENST00000360359|ANKS1A', 'UHRF1BP1-ANKS1A|1|fusion'] 12961 9679 DLPELSDSGD True NCI_RA007_Epitope_Rep5 1046.44039917538 1046.4393099358601 43.866 2 -0.5947908078467724 0.17190035315452898 1.0 ['ENSG00000185238|ENST00000331079|PRMT3'] 115772 6644 TVLSAINVGK True NCI_RA007_Epitope_Rep3 1000.59169529704 1000.59058993586 33.201 2 -0.5947936358287551 0.17190035315452898 1.0 ['ENSG00000100652|ENST00000216540|SLC10A1'] 127798 17419 VRKSLGRG True NCI_RA007_Epitope_Rep2 871.5351834804299 871.53408993586 72.496 2 -0.5948202620613202 0.17190035315452898 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 15048 3252 EAAERVESA True H1975_Epitope_Rep3 960.4512386425998 960.4501499358599 17.186 2 -0.5948571865840648 0.1719135262396004 1.0 ['nc|ENSG00000230487|Q96PY0|PSMG3-AS1', 'ENST00000437621.6_1_7:1626575-1627631:+|nuORF'] 124373 14139 VLDVVERSL True PC9_epitope_Rep6 1028.5866099165999 1028.58550993586 66.256 2 -0.5948666805098498 0.1719239640499483 1.0 ['ENST00000371206.6_1_10:97583001-97605437:+|nuORF', 'nc|ENSG00000138185|P49961-3|ENTPD1', 'nc|ENSG00000138185|P49961-4|ENTPD1', 'nc|ENSG00000138185|P49961-5|ENTPD1', 'ENSG00000138185|ENST00000371205|ENTPD1', 'nc|ENSG00000138185|P49961-2|ENTPD1', 'nc|ENSG00000138185|P49961-6|ENTPD1', 'ENST00000490659.5_1_10:97583001-97604470:+|nuORF'] 115889 23941 TVPDLLLPLV True PC9_epitope_Rep5 1078.66379760814 1078.6627099358602 97.071 2 -0.5948830081403809 0.1719239640499483 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'ENST00000535958.1_1_12:6443054-6450989:-|nuORF', 'ENST00000538363.1_1_12:6443236-6450989:-|nuORF', 'nc|ENSG00000067182|P19438-5|TNFRSF1A', 'nc|ENSG00000067182|P19438-4|TNFRSF1A'] 118336 14148 VDFCYDYLWCV True PC9_epitope_Rep5 1424.57809603184 1424.5769899358602 59.431 2 -0.594924261523707 0.17193713613081793 1.0 ['nc|ENSG00000172243|Q9BXN2-6|CLEC7A', 'ENST00000528799.1_1_12:10277853-10282681:-|nuORF'] 92298 11081 RQLGLPTAL True NCI_RA007_Epitope_Rep5 967.5814649665099 967.58036993586 49.257 2 -0.5949304341176895 0.17195030779264162 1.0 ['ENSG00000053372|ENST00000330263|MRTO4'] 12218 17902 DIPLVKSYL True PC9_epitope_Rep1 1046.60119735158 1046.60010993586 73.652 2 -0.5949947782691893 0.17200299024987672 1.0 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 112112 5544 TLTSDLGP True H1975_Epitope_Rep2 802.4072485722999 802.40614993586 26.332 2 -0.5949964743508567 0.17200299024987672 1.0 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-4|IGFN1', 'nc|ENSG00000163395|Q86VF2-3|IGFN1', 'nc|ENSG00000163395|Q86VF2-2|IGFN1', 'ENST00000473483.1_1_1:201182298-201185067:+|nuORF'] 60018 17686 LHRGRRLLGP True PC9_epitope_Rep1 1173.7206928343298 1173.71958993586 72.824 2 -0.5949999273697397 0.17200299024987672 1.0 ['ENST00000424383.4_1_7:1784183-1785002:+|nuORF'] 107579 5851 TAEQPPSP True H1975_Epitope_Rep2 825.3868474808899 825.38574993586 27.494 2 -0.5950140578699354 0.17200299024987672 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1'] 41952 13602 IEASDLSSLLE True PC9_epitope_Rep6 1175.59214878951 1175.5910499358602 64.073 2 -0.5950340702869796 0.17203206514823768 1.0 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'ENST00000462933.1_1_10:103902785-103904065:+|nuORF'] 69753 5097 LWKSWDSYYSK True NCI_RA007_Epitope_Rep2 1461.69286589029 1461.69121490379 24.45 3 -0.5950525193179436 0.17204523404323 1.0 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'chr4:69599394-69638899|138|17.34|0.08|7.68|-|ENST00000514019|UGT2A2,UGT2A2', 'chr4:69599394-69646930|175|34.62|0.22|7.32|-|ENST00000512704|UGT2A2,UGT2A1', 'nc|ENSG00000173610|P0DTE4-1|UGT2A1', 'ENSG00000173610|ENST00000286604|UGT2A1'] 73327 8984 NELHECNELG True H1975_Epitope_Rep2 1156.48188714788 1156.48078993586 39.511 2 -0.5951007531936344 0.17205566600397615 1.0 ['ENST00000422060.2_1_7:5161504-5161795:-|nuORF', 'nc|ENSG00000235944|A8K554|ZNF815P'] 74453 7469 NKALEGDKTK True NCI_RA007_Epitope_Rep1 1102.59823722946 1102.5971499358602 33.043 2 -0.5951134667984826 0.17205566600397615 1.0 ['ENSG00000186675|ENST00000373359|MAGEE2'] 115679 17812 TVLARMVSI True PC9_epitope_Rep4 988.57393705792 988.57282993586 76.546 2 -0.5951342853715473 0.1720792646076529 1.0 ['ENST00000487364.1_1_19:19771386-19774475:-|nuORF', 'AluSc_dup13832|chr7:33006087-33006413:-|3.1359140164592656|0.4159080058002372|2.91|502.0|13|1|anti-sense', 'ENST00000434453.1_1_7:156616573-156629563:-|nuORF'] 59129 8851 LGEMWSEQSAK True NCI_RA007_Epitope_Rep5 1264.5757875327201 1264.57468993586 40.71 2 -0.595136775293802 0.1720792646076529 1.0 ['ENSG00000164104|ENST00000296503|HMGB2', 'ENST00000511316.1_1_4:174253953-174254163:-|nuORF'] 128971 5740 VSVRSQID True PC9_epitope_Rep4 902.48214484806 902.48104993586 28.907 2 -0.5951576246015428 0.1720792646076529 1.0 ['ENSG00000116688|ENST00000235329|MFN2', 'nc|ENSG00000116688|O95140-2|MFN2'] 3183 10561 AGELFSVGGDL True PC9_epitope_Rep3 1063.51858992643 1063.51748993586 45.57 2 -0.5952503665574689 0.1721401421778336 1.0 ['ENST00000562846.1_1_16:67595386-67595647:-|nuORF'] 61559 16561 LLGLKKLSFYY True NCI_RA007_Epitope_Rep2 1343.78530972315 1343.7842099358602 69.147 2 -0.5953018682773709 0.1721664731794978 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 65643 11400 LSGRQERK True PC9_epitope_Rep4 972.5464764401199 972.54536993586 51.62 2 -0.5953307599374279 0.1721664731794978 1.0 ['NBN|p.L708*|1|0.21|ENSG00000104320|chr8:89943316-89943316|A/-|frameshift_variant', 'ENSG00000104320|ENST00000265433|NBN'] 65091 4750 LSDLQTAAA True NCI_RA007_Epitope_Rep5 888.4552613938799 888.45416993586 24.955 2 -0.5954227315805619 0.1722218688378602 1.0 ['ENSG00000120329|ENST00000239451|SLC25A2'] 135790 6746 YENFRLWQHYK True NCI_RA007_Epitope_Rep1 1582.76809651922 1582.76589987172 30.25 4 -0.5954244857529148 0.1722218688378602 1.0 ['nc|ENSG00000188152|Q5VZR2-2|NUTM2G', 'nc|ENSG00000188199|A6NNL0-2|NUTM2B', 'nc|ENSG00000184923|Q8IVF1-2|NUTM2A', 'ENSG00000188152|ENST00000372322|NUTM2G', 'ENSG00000130950|ENST00000253262|NUTM2F', 'ENSG00000214562|ENST00000381697|NUTM2D', 'ENSG00000228570|ENST00000429984|NUTM2E', 'ENSG00000188199|ENST00000429828|NUTM2B', 'ENSG00000184923|ENST00000381707|NUTM2A', 'NUTM2G|p.R222Gfs*30|1|0.2|ENSG00000188152|chr9:96932367-96932367|G/-|frameshift_variant', 'NUTM2F|p.P392Lfs*43|1|0.27|ENSG00000130950|chr9:94320401-94320401|G/-|frameshift_variant'] 74280 9029 NIIKKINVT True NCI_RA007_Epitope_Rep3 1041.65462990677 1041.6535299358602 42.611 2 -0.5954336914839311 0.1722218688378602 1.0 ['ENSG00000165935|ENST00000535986|SMCO2'] 68524 6390 LTVTGAVPVA True H1975_Epitope_Rep2 926.54368247546 926.54258993586 29.503 2 -0.5954790031408066 0.1722509342450505 1.0 ['ENSG00000197110|ENST00000413851|IFNL3', 'ENSG00000183709|ENST00000331982|IFNL2'] 85666 12473 QLQQELLL True PC9_epitope_Rep6 983.5651461960299 983.56404993586 59.401 2 -0.5955511026684505 0.17226904118301797 1.0 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000461159.6_1_7:18330122-18868840:+|nuORF', 'nc|ENSG00000048052|Q9UKV0-11|HDAC9', 'nc|ENSG00000048052|Q9UKV0-9|HDAC9', 'HDAC9|p.L539Sfs*14|1|0.4|ENSG00000048052|chr7:18666366-18666373|ACACTGGG/-|frameshift_variant', 'nc|ENSG00000048052|Q9UKV0-10|HDAC9', 'nc|ENSG00000048052|Q9UKV0-8|HDAC9', 'nc|ENSG00000048052|Q9UKV0-3|HDAC9'] 20710 16424 EQIVTVNDHKR True H1975_Epitope_Rep1 1337.7051619094898 1337.7040699358602 68.535 2 -0.5955883462977859 0.17226904118301797 1.0 ['nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'nc|ENSG00000166912|Q9NXD2-3|MTMR10'] 135931 11169 YEVVQYLLS True NCI_RA007_Epitope_Rep4 1112.57537652656 1112.57426993586 49.836 2 -0.5956015632236371 0.17226904118301797 1.0 ['ENSG00000181090|ENST00000460843|EHMT1', 'nc|ENSG00000181090|Q9H9B1-3|EHMT1'] 128860 9618 VSSPAAGVPG True PC9_epitope_Rep5 840.4341320264799 840.43302993586 41.96 2 -0.5956902990622558 0.17226904118301797 1.0 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1', 'ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 25952 12385 FGSGAGSSSF True PC9_epitope_Rep5 902.37701107318 902.37646496793 52.636 1 -0.5956920830126606 0.17226904118301797 1.0 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000489121.1_1_3:137820322-137820643:-|nuORF'] 106419 9253 SVTLHWDLP True PC9_epitope_Rep3 1066.54474510462 1066.54364993586 40.537 2 -0.5957317407895744 0.1722822025409041 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 90113 10337 RGRQAQSA True NCI_RA007_Epitope_Rep3 872.4576614357198 872.45656993586 47.725 2 -0.5957565769160315 0.1723085240010812 1.0 ['ENST00000591295.5_1_17:42271068-42271269:-|nuORF'] 94097 6000 RVYIKLYGD True NCI_RA007_Epitope_Rep5 1125.61824439805 1125.6166049037902 29.762 3 -0.5957594728165964 0.1723085240010812 1.0 ['ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF'] 55505 10048 LAVSDALYAA True H1975_Epitope_Rep1 992.51786165044 992.51676993586 43.589 2 -0.595790664172285 0.17232114467408585 1.0 ['ENSG00000175591|ENST00000393597|P2RY2'] 84473 11070 QGLTANSL True PC9_epitope_Rep3 802.41848196234 802.41738993586 47.581 2 -0.5957977160154807 0.17232114467408585 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1'] 86854 4427 QRQPQPFL True PC9_epitope_Rep4 1012.5454138109598 1012.54430993586 23.48 2 -0.5958133118886829 0.17232114467408585 1.0 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 63416 10123 LPGKSLTY True PC9_epitope_Rep1 877.49091862661 877.48982993586 43.812 2 -0.5958146989423472 0.17232114467408585 1.0 ['ENST00000374232.7_1_9:115631560-115631692:+|nuORF'] 12147 5835 DIKDDIYDP True NCI_RA007_Epitope_Rep2 1092.49752012868 1092.49642993586 27.316 2 -0.5958204961174969 0.17232114467408585 1.0 ['ENSG00000099194|ENST00000370355|SCD'] 140014 15289 YVLFYFLNC True NCI_RA007_Epitope_Rep5 1180.56270366788 1180.5616099358601 65.505 2 -0.5958272344493709 0.17232114467408585 1.0 ['ENST00000560776.1_1_15:59961053-59961500:-|nuORF'] 63489 8465 LPHSIAPG True PC9_epitope_Rep4 790.43373810366 790.43264993586 40.03 2 -0.595837993398835 0.17232114467408585 1.0 ['ENST00000302424.11_1_10:104417132-104417561:+|nuORF'] 19497 10923 ELQHVQWRPR True H1975_Epitope_Rep1 1347.7160013767098 1347.71490993586 46.978 2 -0.5958864644106551 0.17233924171369525 1.0 ['ENSG00000179846|ENST00000686631|NKPD1', 'nc|ENSG00000179846|Q17RQ9|NKPD1'] 133361 26285 WFGGCSWA True PC9_epitope_Rep4 912.35885891124 912.35776993586 111.45 2 -0.5958872477562078 0.17233924171369525 1.0 ['ENSG00000104783|ENST00000648319|KCNN4'] 104161 16550 SSAQFYVT True PC9_epitope_Rep1 901.4181476091699 901.4175949679301 68.483 1 -0.5958908150567606 0.17233924171369525 1.0 ['ENSG00000008282|ENST00000455385|SYPL1', 'nc|ENSG00000008282|Q16563|SYPL1'] 65834 12896 LSKMAQRPYQ True PC9_epitope_Rep2 1220.63357719236 1220.63194490379 54.903 3 -0.5959662049480536 0.17233924171369525 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2'] 19817 13467 ELTRKIGFDP True H1975_Epitope_Rep2 1174.6346227381798 1174.63352993586 56.934 2 -0.595970687886267 0.17233924171369525 1.0 ['ENSG00000153790|ENST00000283905|C7orf31'] 110753 26749 TKKKILYKQYI True PC9_epitope_Rep1 1424.8755217098796 1424.87442993586 108.77 2 -0.5960648680686764 0.1723781670216486 1.0 ['ENST00000437176.5_1_14:75936668-75936947:+|nuORF'] 112143 14680 TLVEKMNV True PC9_epitope_Rep5 932.50010341132 932.49900993586 61.471 2 -0.5960834691473896 0.1723781670216486 1.0 ['nc|ENSG00000196296|O14983|ATP2A1', 'ENSG00000196296|ENST00000395503|ATP2A1', 'nc|ENSG00000196296|O14983-3|ATP2A1'] 66206 12563 LSPPKYNVL True PC9_epitope_Rep2 1029.58588164061 1029.58478993586 53.632 2 -0.5960973691617962 0.1723781670216486 1.0 ['ENST00000608023.5_1_1:207977039-207977294:-|nuORF'] 85850 18418 QNDNAPEIL True PC9_epitope_Rep4 1012.48253877088 1012.48144993586 78.912 2 -0.5961074288401627 0.1723781670216486 1.0 ['nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1', 'ENSG00000204956|ENST00000517417|PCDHGA1', 'PCDHGA2|p.P565S|1|0.54|ENSG00000081853|chr5:141340664-141340664|C/T|missense_variant', 'nc|ENSG00000253873|Q9Y5H2-3|PCDHGA11', 'nc|ENSG00000253731|Q9Y5G7-2|PCDHGA6', 'nc|ENSG00000081853|Q9Y5H1-2|PCDHGA2', 'nc|ENSG00000261934|Q9Y5G4-2|PCDHGA9', 'nc|ENSG00000253873|Q9Y5H2-2|PCDHGA11', 'nc|ENSG00000253846|Q9Y5H3-2|PCDHGA10', 'ENSG00000261934|ENST00000573521|PCDHGA9', 'ENSG00000253731|ENST00000517434|PCDHGA6', 'ENSG00000253873|ENST00000398587|PCDHGA11', 'ENSG00000253846|ENST00000398610|PCDHGA10', 'ENSG00000081853|ENST00000394576|PCDHGA2', 'PCDHGA8|p.P565Lfs*24|2|0.37|ENSG00000253767|chr5:141394507-141394508|CC/T|frameshift_variant', 'nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8', 'ENSG00000253767|ENST00000398604|PCDHGA8', 'nc|ENSG00000253159|O60330-2|PCDHGA12', 'ENSG00000253159|ENST00000252085|PCDHGA12', 'ENSG00000254245|ENST00000253812|PCDHGA3', 'nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3'] 140539 15535 YYLIWKNY True PC9_epitope_Rep5 1161.5858816406098 1161.58478993586 64.765 2 -0.5961557196315979 0.1723781670216486 1.0 ['ENSG00000214814|ENST00000522917|FER1L6'] 13199 5855 DLTEDQLPSY True H1975_Epitope_Rep3 1179.52954853295 1179.5284499358602 27.535 2 -0.596156265010723 0.1723781670216486 1.0 ['ENSG00000226784|ENST00000458128|PGAM4'] 69252 10517 LVNVFDINID True H1975_Epitope_Rep1 1160.607739284 1160.60664993586 45.406 2 -0.596160062424208 0.1723781670216486 1.0 ['ENSG00000140006|ENST00000620954|WDR89'] 16298 5837 EEIQEVRSKSD True NCI_RA007_Epitope_Rep2 1318.6364732129798 1318.6353699358601 27.323 2 -0.5961738111684338 0.1723781670216486 1.0 ['nc|ENSG00000131828|P08559-3|PDHA1', 'PDHA2|p.R312S|1|0.25|ENSG00000163114|chr4:95841086-95841086|G/T|missense_variant', 'ENSG00000131828|ENST00000422285|PDHA1', 'nc|ENSG00000131828|P08559-2|PDHA1', 'nc|ENSG00000131828|P08559-4|PDHA1'] 9737 8759 AYLAALTQL True NCI_RA007_Epitope_Rep3 962.54368247546 962.54258993586 41.542 2 -0.5962123339001919 0.1723781670216486 1.0 ['ENSG00000079435|ENST00000244289|LIPE', 'nc|ENSG00000079435|Q05469-2|LIPE'] 125775 13951 VNIWNPKRKLQ True NCI_RA007_Epitope_Rep2 1394.81465278882 1394.81354993586 58.923 2 -0.5962316137873793 0.17238584166441503 1.0 ['ENST00000592676.1_1_17:74731222-74731732:-|nuORF', 'ENST00000392485.2_1_17:74731675-74731732:-|nuORF'] 37025 9141 GVSAATFLK True NCI_RA007_Epitope_Rep3 892.50181766348 892.50072993586 43.041 2 -0.5962352149669343 0.17238584166441503 1.0 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL'] 115379 5603 TVENIKDP True PC9_epitope_Rep1 914.4709114580199 914.46980993586 26.379 2 -0.5962354253550783 0.17238584166441503 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000555062.1_1_14:102514125-102516009:+|nuORF'] 118263 3393 VCNRHCENGG True PC9_epitope_Rep1 1087.42874645955 1087.42764993586 17.972 2 -0.5962686446002221 0.17241488922089068 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 20148 4892 ENLVKNLNSEN True NCI_RA007_Epitope_Rep3 1272.6309939097198 1272.62988993586 26.231 2 -0.596356295612658 0.17244393585403456 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 9000 15981 AVIATASAPP True PC9_epitope_Rep1 896.4967322830399 896.49562993586 66.28 2 -0.5963639426799691 0.17245708836617926 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L', 'ASH1L|p.D1735H|1|0.06|ENSG00000116539|chr1:155438952-155438952|C/G|missense_variant'] 84359 11197 QGAGSVLF True NCI_RA007_Epitope_Rep4 777.40210362221 777.40100993586 49.956 2 -0.5964187282035153 0.17248613340538135 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 93067 2954 RRRKRKKRK True NCI_RA007_Epitope_Rep1 1310.8959718576996 1310.89432490379 15.338 3 -0.5964792265322635 0.17249654339430734 1.0 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 124879 20212 VLLMFGLLLHL True NCI_RA007_Epitope_Rep2 1267.7726368644699 1267.77100490379 83.652 3 -0.5964837509851374 0.17249654339430734 1.0 ['nc|ENSG00000204544|Q5SSG8-3|MUC21', 'ENSG00000204544|ENST00000376296|MUC21', 'nc|ENSG00000204544|Q5SSG8-2|MUC21'] 64745 5127 LRRIRQRSNSD True PC9_epitope_Rep3 1399.7756415111498 1399.77400490379 24.807 3 -0.5966587183352238 0.1725705204608661 1.0 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 61558 16368 LLGLKKLSFYY True NCI_RA007_Epitope_Rep1 1343.78530972315 1343.7842099358602 67.781 2 -0.5966596299418494 0.1725705204608661 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 83612 9307 QDVEKELRDGG True PC9_epitope_Rep4 1244.5996937814398 1244.5985899358602 43.406 2 -0.5966952843879123 0.17261545307186218 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant'] 487 5761 AAPAAPAAAA True PC9_epitope_Rep1 780.4130026590799 780.41190993586 26.976 2 -0.5967714136900609 0.17267021530150156 1.0 ['ENST00000609309.2_3_7:99955774-99964972:+|nuORF', 'ENST00000452089.5_3_7:99950875-99964972:+|nuORF'] 116422 14908 TWRRSMWWRTR True H1975_Epitope_Rep1 1620.8208178817597 1620.81972993586 62.581 2 -0.596803062243998 0.17267021530150156 1.0 ['chr16:29454110-29454191|289|41.68|0.0|21.99|-|1|None,BOLA2-SMG1P6|1'] 52869 8303 KREQEERRDWL True H1975_Epitope_Rep1 1543.7855374885098 1543.7839049037898 36.869 3 -0.5968131397271083 0.17267021530150156 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 122346 10513 VGSALTVPL True PC9_epitope_Rep5 855.50656869075 855.50546993586 45.425 2 -0.5968645898268382 0.17267021530150156 1.0 ['ENST00000581764.1_1_17:61907522-61908306:+|nuORF'] 79119 4558 PGAEERRCPVL True H1975_Epitope_Rep3 1225.62374078465 1225.62208490379 22.652 3 -0.5968776090763054 0.17267021530150156 1.0 ['ENST00000265626.8_3_20:56227391-56286474:-|nuORF', 'ENST00000341744.7_2_20:56227391-56284786:-|nuORF'] 57295 11136 LEGIQHRVQ True NCI_RA007_Epitope_Rep1 1078.5883412521 1078.5872499358602 47.317 2 -0.5968860310337478 0.17267021530150156 1.0 ['TSGA10IP|p.Q456E|1|0.37|ENSG00000175513|chr11:65958926-65958926|C/G|missense_variant'] 20471 6141 EPSLFFQDP True H1975_Epitope_Rep2 1078.4971262058598 1078.4960299358602 28.6 2 -0.5969563555983376 0.17267021530150156 1.0 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'TRIOBP|p.P1192S|1|0.14|ENSG00000100106|chr22:37726130-37726130|C/T|missense_variant', 'nc|ENSG00000100106|Q9H2D6-4|TRIOBP', 'ENST00000492485.5_1_22:38106528-38122511:+|nuORF', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 29358 2716 FVEEWRKFVRK True NCI_RA007_Epitope_Rep2 1522.8408675366597 1522.8392249037902 14.792 3 -0.5969985744685504 0.17267021530150156 1.0 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48'] 127791 2073 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 11.494 3 -0.5970026252347366 0.17267021530150156 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 20946 6939 EQWTPFLYDFY True H1975_Epitope_Rep3 1507.66598243611 1507.66432490379 31.652 3 -0.597111108803633 0.17273045025579103 1.0 ['PGD-NTSR1|1|fusion', 'ENSG00000101188|ENST00000370501|NTSR1'] 92676 14419 RRGRALRLVRR True NCI_RA007_Epitope_Rep3 1407.9123501978297 1407.91069490379 64.029 3 -0.5971531077054703 0.17273045025579103 1.0 ['ENST00000542643.6_1_1:21923469-21929393:-|nuORF', 'ENST00000374763.6_2_1:21923469-21929399:-|nuORF'] 130251 8972 VTSSFCEDK True H1975_Epitope_Rep3 1014.4328116971399 1014.43170993586 39.506 2 -0.5971554209650385 0.17273045025579103 1.0 ['ENST00000284637.13_1_4:170077595-170077751:-|nuORF'] 32842 10892 GIGVITIE True PC9_epitope_Rep1 800.4643695256 800.46326993586 46.781 2 -0.5971597896612634 0.17273045025579103 1.0 ['nc|ENSG00000157765|O95436-2|SLC34A2', 'ENSG00000157765|ENST00000382051|SLC34A2'] 22740 7479 EVAFRKFK True H1975_Epitope_Rep3 1023.5865503469498 1023.5854499358601 33.748 2 -0.597199649310728 0.17273045025579103 1.0 ['ENSG00000145425|ENST00000274065|RPS3A', 'ENST00000389400.4_1_10:86320393-86320726:+|nuORF', 'ENST00000493479.1_1_4:153472952-153473506:-|nuORF', 'ENST00000443616.1_1_1:119669641-119669854:-|nuORF'] 72816 19310 NAIYYYADQIY True PC9_epitope_Rep4 1395.6346823078297 1395.63358993586 82.383 2 -0.5972477414296817 0.17273045025579103 1.0 ['ENSG00000142583|ENST00000377424|SLC2A5'] 112785 18523 TPLILSVKP True PC9_epitope_Rep3 966.61136811246 966.61026993586 76.466 2 -0.5972496747023324 0.17273045025579103 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549'] 78329 15953 PASSSTKLL True PC9_epitope_Rep1 902.50729696674 902.50618993586 66.173 2 -0.5972821923147866 0.17273810469457462 1.0 ['ENSG00000102313|ENST00000218436|ITIH6'] 120671 8136 VGAPGYSR True PC9_epitope_Rep4 805.40825163181 805.40714993586 38.748 2 -0.5972936712257937 0.17273810469457462 1.0 ['ENSG00000112293|ENST00000230036|GPLD1'] 93505 5494 RSLDKEMKTW True NCI_RA007_Epitope_Rep2 1292.65470655976 1292.65306490379 25.988 3 -0.5973035335468935 0.17273810469457462 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 79822 21670 PIEEAYAIL True PC9_epitope_Rep2 1017.5382627418497 1017.53716993586 88.83 2 -0.5973225537894545 0.17275124710068948 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.N1473Ifs*15|1|0.19|ENSG00000124721|chr6:38848664-38848664|A/-|frameshift_variant', 'DNAH8|p.S2130Vfs*12|1|0.21|ENSG00000124721|chr6:38872578-38872578|G/-|frameshift_variant'] 40772 6928 HVFALECK True H1975_Epitope_Rep3 945.47422301665 945.47312993586 31.609 2 -0.5974312713329349 0.1728120482310515 1.0 ['nc|ENSG00000164306|Q96LW4-2|PRIMPOL', 'ENSG00000164306|ENST00000314970|PRIMPOL'] 123436 10164 VIEGVNTP True PC9_epitope_Rep6 827.43888305375 827.43778993586 49.727 2 -0.5975312991414947 0.17285696130139164 1.0 ['ENSG00000186280|ENST00000335080|KDM4D', 'ENSG00000235268|ENST00000450979|KDM4E', 'ENSG00000255855|ENST00000545950|KDM4F'] 92580 14013 RRCLRRWFHFW True H1975_Epitope_Rep1 1661.86262312409 1661.86152993586 59.062 2 -0.5975718709715829 0.17289912629070692 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4'] 62931 19036 LNASLLGGVL True PC9_epitope_Rep2 955.57023157647 955.56912993586 78.588 2 -0.5976037540708645 0.17289912629070692 1.0 ['ENSG00000087510|ENST00000201031|TFAP2C', 'nc|ENSG00000087510|Q92754-2|TFAP2C', 'TFAP2A|p.R256G|1|0.31|ENSG00000137203|chr6:10404512-10404512|G/C|missense_variant', 'TFAP2A|p.I274Nfs*11|1|0.13|ENSG00000137203|chr6:10402560-10402561|-/T|frameshift_variant', 'TFAP2B|p.K290Mfs*16|1|0.19|ENSG00000008196|chr6:50838019-50838061|AAAAAATCGGTTTGAATTTACCCGCGGGCAGGCGCAAAGCAGC/-|frameshift_variant', 'nc|ENSG00000137203|P05549-2|TFAP2A', 'ENSG00000008196|ENST00000393655|TFAP2B', 'nc|ENSG00000008196|Q92481-2|TFAP2B', 'nc|ENSG00000137203|P05549-5|TFAP2A', 'nc|ENSG00000137203|P05549-6|TFAP2A', 'nc|ENSG00000137203|P05549|TFAP2A', 'ENSG00000137203|ENST00000379613|TFAP2A', 'ENSG00000116819|ENST00000373235|TFAP2E'] 139776 6028 YVDAWSSNF True PC9_epitope_Rep5 1087.46107505031 1087.45996993586 28.179 2 -0.5976594205228071 0.17292815046623564 1.0 ['ENSG00000205038|ENST00000378402|PKHD1L1', 'PKHD1L1|p.G3595Efs*3|1|0.42|ENSG00000205038|chr8:109498726-109498726|G/-|frameshift_variant', 'PKHD1L1|p.S3970Mfs*9|1|0.26|ENSG00000205038|chr8:109518386-109518386|G/-|frameshift_variant', 'PKHD1L1|p.N2355Tfs*2|1|0.39|ENSG00000205038|chr8:109459652-109459652|A/-|frameshift_variant', 'PKHD1L1|p.V3282Lfs*8|1|0.21|ENSG00000205038|chr8:109486784-109486784|G/-|frameshift_variant'] 127300 19479 VQLPSYAP True PC9_epitope_Rep3 873.4596184983299 873.45852993586 80.155 2 -0.597716066250725 0.17293519695044474 1.0 ['nc|ENSG00000214290|A8K830-1|POU2AF3', 'ENSG00000214290|ENST00000610738|POU2AF3', 'nc|ENSG00000214290|A8K830-4|POU2AF3', 'nc|ENSG00000214290|A8K830-3|POU2AF3'] 9336 5415 AVSVLRHWLK True NCI_RA007_Epitope_Rep3 1207.71896149883 1207.7173049037901 28.311 3 -0.5977461771570317 0.17293519695044474 1.0 ['SPATA19|p.H40R|2|0.11|ENSG00000166118|chr11:133845150-133845150|T/C|missense_variant'] 106301 22605 SVRKRRVRK True H1975_Epitope_Rep2 1183.7737910363496 1183.7726899358602 93.387 2 -0.5977530416723039 0.17293519695044474 1.0 ['nc|ENSG00000153132|O14967-2|CLGN', 'ENSG00000153132|ENST00000325617|CLGN'] 38937 5698 HIPVLPGK True NCI_RA007_Epitope_Rep5 859.5279728416699 859.52686993586 28.604 2 -0.5977769323612067 0.17293519695044474 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 19598 10647 ELRKEISV True PC9_epitope_Rep1 972.5603951687599 972.55928993586 45.845 2 -0.5977791102225624 0.17293519695044474 1.0 ['ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 22573 9573 ETNFPEPP True H1975_Epitope_Rep2 929.4130622287298 929.41196993586 41.797 2 -0.5977858549668437 0.17293519695044474 1.0 ['nc|ENSG00000156738|P11836-2|MS4A1', 'ENSG00000156738|ENST00000345732|MS4A1'] 85532 16466 QLKQQIQSI True PC9_epitope_Rep2 1084.62405805448 1084.62296993586 68.577 2 -0.5977994952214604 0.17293519695044474 1.0 ['ENSG00000100138|ENST00000401959|SNU13'] 134149 19996 WRGRLRGA True NCI_RA007_Epitope_Rep2 970.5573159073398 970.55620993586 82.782 2 -0.5978079662962325 0.17293519695044474 1.0 ['ENSG00000164975|ENST00000380821|SNAPC3'] 19007 12408 ELGGKTEDAI True NCI_RA007_Epitope_Rep1 1031.51350454599 1031.5124099358602 52.239 2 -0.5978167486896129 0.17293519695044474 1.0 ['HOOK2|p.Q527L|1|0.21|ENSG00000095066|chr19:12765946-12765946|T/A|missense_variant'] 78994 16399 PFLGSQSATP True PC9_epitope_Rep6 1003.4974605590301 1003.49636993586 75.47 2 -0.597833655881536 0.17294283944538857 1.0 ['ENSG00000142178|ENST00000270162|SIK1'] 99136 12139 SLAISSSLVS True PC9_epitope_Rep4 962.52842633414 962.5273299358599 54.507 2 -0.5978417058030064 0.17294283944538857 1.0 ['nc|ENSG00000146147|Q5VWP3-2|MLIP', 'nc|ENSG00000146147|Q5VWP3-1|MLIP', 'nc|ENSG00000146147|Q5VWP3-4|MLIP', 'ENST00000511744.1_1_6:53976250-54068425:+|nuORF', 'ENSG00000146147|ENST00000502396|MLIP'] 137230 18421 YLETTVYAL True PC9_epitope_Rep2 1071.54882742555 1071.5477299358602 76.186 2 -0.5978880362720516 0.17294283944538857 1.0 ['ENST00000462315.5_1_3:122278498-122282968:-|nuORF'] 77193 20185 NYGQYFTLW True NCI_RA007_Epitope_Rep1 1190.53965972418 1190.53907496793 82.723 1 -0.5979584272329118 0.17300087350115143 1.0 ['ENSG00000109929|ENST00000264027|SC5D'] 100981 10282 SLSTVFVVLG True H1975_Epitope_Rep2 1020.5855472874398 1020.58444993586 44.556 2 -0.5979626944632379 0.17300087350115143 1.0 ['ENSG00000134255|ENST00000357172|CEPT1'] 57734 21349 LENLVYYN True PC9_epitope_Rep1 1026.5022115863 1026.50110993586 86.95 2 -0.5980068171005912 0.17300851226019565 1.0 ['ENST00000472895.5_1_3:49898454-49899024:-|nuORF', 'ENST00000475665.5_1_3:49898454-49899827:-|nuORF', 'nc|ENSG00000164076|Q8NCB2-3|CAMKV', 'nc|ENSG00000164076|Q8NCB2-2|CAMKV', 'ENSG00000164076|ENST00000477224|CAMKV'] 13016 18586 DLQPYKYAGYP True PC9_epitope_Rep1 1313.62920300457 1313.62810993586 76.279 2 -0.5980177656810133 0.17300851226019565 1.0 ['ENSG00000138246|ENST00000260818|DNAJC13', 'DNAJC13|p.D1408Sfs*16|1|0.09|ENSG00000138246|chr3:132499189-132499195|CAGATGA/-|frameshift_variant'] 59188 11991 LGFQKRWRK True PC9_epitope_Rep4 1217.71454482473 1217.7128849037902 53.915 3 -0.5980188146513673 0.17300851226019565 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 105191 10532 STPEAAAQVVQ True H1975_Epitope_Rep3 1099.5509526838698 1099.5503749679299 45.577 1 -0.598039332312504 0.17303203061726827 1.0 ['ENSG00000254772|ENST00000329251|EEF1G', 'nc|ENSG00000254772|P26641-2|EEF1G', 'ENST00000526409.5_1_11:62327153-62342310:-|nuORF', 'EEF1G|p.E206Kfs*2|1|0.31|ENSG00000254772|chr11:62567436-62567436|G/-|frameshift_variant', 'EEF1G-AHNAK|1|fusion'] 14890 7802 DYISHFLTFS True NCI_RA007_Epitope_Rep1 1228.5764391557202 1228.57534993586 34.338 2 -0.5980730803659887 0.17303203061726827 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 124556 5050 VLGNGKGI True NCI_RA007_Epitope_Rep5 756.4493881678 756.44828993586 26.124 2 -0.5981024456844675 0.17303203061726827 1.0 ['ENSG00000147912|ENST00000432825|FBXO10', 'nc|ENSG00000147912|Q9UK96-2|FBXO10', 'ENST00000541804.1_1_9:37512546-37588833:-|nuORF', 'ENST00000543968.5_1_9:37521875-37532049:-|nuORF'] 99684 9528 SLGEGHLSV True PC9_epitope_Rep5 897.45559574705 897.45448993586 41.608 2 -0.59816679374026 0.1731190650109569 1.0 ['ENSG00000124942|ENST00000378024|AHNAK'] 47054 16749 IVSYTYIIFTI True PC9_epitope_Rep1 1331.7376908243896 1331.7360449037901 69.252 3 -0.5982035705988109 0.1731190650109569 1.0 ['OR9A2|p.S219F|1|0.21|ENSG00000179468|chr7:143026477-143026477|G/A|missense_variant'] 36193 17018 GVFPSYYEPW True PC9_epitope_Rep5 1243.55497543515 1243.55332490379 70.478 3 -0.5982203439669755 0.1731190650109569 1.0 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1', 'ENSG00000111713|ENST00000261195|GYS2', 'GYS2|p.S526Vfs*2|1|0.18|ENSG00000111713|chr12:21542566-21542566|G/-|frameshift_variant'] 88083 8278 QVVILDEAH True NCI_RA007_Epitope_Rep3 1022.53965972418 1022.53856993586 39.687 2 -0.5982450985591241 0.1731266970481287 1.0 ['BRIP1|p.T1062Ifs*18|1|0.25|ENSG00000136492|chr17:61683860-61683861|TG/-|frameshift_variant', 'nc|ENSG00000136492|Q9BX63-2|BRIP1', 'ENSG00000136492|ENST00000259008|BRIP1'] 113063 9229 TPVSMAGPYS True PC9_epitope_Rep6 1008.4586325221599 1008.4580749679301 45.645 1 -0.5982489411638929 0.1731266970481287 1.0 ['ENST00000371712.3_1_9:139323637-139324123:-|nuORF'] 7735 5262 ASSMKQVP True NCI_RA007_Epitope_Rep5 846.4269384710599 846.42584993586 26.936 2 -0.5982507766756525 0.1731266970481287 1.0 ['nc|ENSG00000127946|O00291-3|HIP1', 'ENSG00000127946|ENST00000336926|HIP1', 'ENST00000485723.1_1_7:75283957-75368238:-|nuORF', 'ENST00000479835.1_1_7:75362785-75368238:-|nuORF'] 81521 17813 PQTLPLQLEL True PC9_epitope_Rep3 1150.65977485686 1150.6581149037902 73.714 3 -0.5982928889009435 0.17317158372765093 1.0 ['ENSG00000146373|ENST00000521654|RNF217'] 108768 20628 TEPLWKAAV True PC9_epitope_Rep5 1013.5545815123298 1013.55348993586 84.396 2 -0.5983389532437818 0.17318471236443894 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-3|DYNC2H1'] 59583 15858 LGRRQWWWRRR True H1975_Epitope_Rep3 1654.9181638542598 1654.9170699358601 66.447 2 -0.5983548068030132 0.1731950905828742 1.0 ['ENST00000296754.7_2_5:96139638-96143632:-|nuORF'] 45761 2827 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 15.019 2 -0.5983869141237415 0.1731950905828742 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 5876 5306 APGQTLAPR True PC9_epitope_Rep3 909.5032146458099 909.50210993586 25.486 2 -0.5984127653207322 0.17321859519878063 1.0 ['ENST00000515156.2_1_5:68927792-68932223:+|nuORF', 'ENST00000545024.1_5:69806308-69808341:+|nuORF'] 68743 9798 LVDLASTEKPP True H1975_Epitope_Rep3 1168.63395403184 1168.6328499358601 42.713 2 -0.5984757967159419 0.17321859519878063 1.0 ['ENSG00000141580|ENST00000392325|WDR45B', 'ENST00000573656.5_1_17:80576964-80583409:-|nuORF'] 47952 9504 KAAQVTAG True PC9_epitope_Rep3 744.4130026590799 744.4124549679301 41.505 1 -0.5984864724952348 0.17321859519878063 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 24431 20002 FAGIACAPVL True PC9_epitope_Rep5 960.5102741722 960.50916993586 81.991 2 -0.5986370509282136 0.1732634754306581 1.0 ['ENSG00000167487|ENST00000300976|KLHL26'] 67955 14035 LTLLNRHKNIH True H1975_Epitope_Rep1 1357.7942516974101 1357.7931499358601 59.149 2 -0.5987039608649173 0.17328972645149 1.0 ['ENSG00000197782|ENST00000683561|ZNF780A', 'nc|ENSG00000197782|O75290-3|ZNF780A'] 79948 15454 PISDTIIP True H1975_Epitope_Rep3 854.4749342092999 854.4743849679301 64.858 1 -0.5987140036629188 0.17328972645149 1.0 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 66346 8263 LSQRSEVL True PC9_epitope_Rep1 930.5134449763399 930.51234993586 36.618 2 -0.5987847102973568 0.1733477273809713 1.0 ['nc|ENSG00000170909|Q8IYS5-2|OSCAR', 'ENSG00000170909|ENST00000358375|OSCAR', 'nc|ENSG00000170909|Q8IYS5-3|OSCAR', 'nc|ENSG00000170909|Q8IYS5-5|OSCAR', 'nc|ENSG00000170909|Q8IYS5|OSCAR', 'nc|ENSG00000170909|Q8IYS5-7|OSCAR', 'nc|ENSG00000170909|Q8IYS5-6|OSCAR', 'nc|ENSG00000170909|Q8IYS5-4|OSCAR'] 31189 7205 GDGRDSPVL True PC9_epitope_Rep4 914.4457593393399 914.44466993586 35.018 2 -0.5987889334258575 0.1733477273809713 1.0 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL'] 36541 7129 GVKVRYLEEER True PC9_epitope_Rep1 1376.7412130650398 1376.7401099358601 32.231 2 -0.5989552835684567 0.1734505969011938 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L', 'HSPA4L|p.E307Wfs*8|1|0.14|ENSG00000164070|chr4:127804018-127804039|TTTGAACAACTGTGTGCTTCCC/-|frameshift_variant'] 41623 15021 IDGTIEIPKC True PC9_epitope_Rep5 1087.55834656343 1087.55724993586 62.782 2 -0.5989916044442809 0.1734505969011938 1.0 ['CON__P17690'] 117627 6939 VAIDFSKG True NCI_RA007_Epitope_Rep3 835.44396843419 835.44286993586 34.401 2 -0.5989923250439596 0.1734505969011938 1.0 ['ENST00000590008.5_1_19:38161161-38167293:-|nuORF'] 124660 8788 VLIHTGGKPY True H1975_Epitope_Rep1 1083.6076797143498 1083.60658993586 38.731 2 -0.5991551704080629 0.17352721730985982 1.0 ['BCL6|p.E627G|1|0.27|ENSG00000113916|chr3:187725038-187725038|T/C|missense_variant'] 66511 11069 LSSDARYKMP True PC9_epitope_Rep1 1166.5753936099 1166.5742899358602 47.465 2 -0.5992276608534624 0.17354033717496906 1.0 ['PDILT|p.R364Lfs*5|1|0.18|ENSG00000169340|chr16:20369515-20369517|TGC/A|frameshift_variant', 'ENSG00000169340|ENST00000302451|PDILT'] 35973 22117 GVAVMKLFNKA True PC9_epitope_Rep5 1176.66890007192 1176.66780993586 90.107 2 -0.5992860473001771 0.17358244967934472 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 66864 10794 LSWEDSGLYQ True H1975_Epitope_Rep2 1196.5349682665599 1196.5338699358601 46.547 2 -0.5993132997066335 0.17358244967934472 1.0 ['nc|ENSG00000162723|Q96A28-2|SLAMF9', 'ENSG00000162723|ENST00000368093|SLAMF9'] 134735 23099 WWWKLHFVWER True H1975_Epitope_Rep2 1671.84628727027 1671.84409987172 95.311 4 -0.5994146489288774 0.17359281247023714 1.0 ['MGAT2|p.T412Sfs*8|1|0.53|ENSG00000168282|chr14:49622499-49622502|CTAA/-|frameshift_variant', 'ENSG00000168282|ENST00000305386|MGAT2'] 81969 15414 PSQTCFQSLL True PC9_epitope_Rep1 1122.5379454720198 1122.5368499358601 64.108 2 -0.5994209584208758 0.17359281247023714 1.0 ['ENST00000290551.4_1_1:203278127-203278334:+|nuORF'] 5316 10140 ALSGQSYLAI True NCI_RA007_Epitope_Rep4 1021.5444107514498 1021.54330993586 45.861 2 -0.59946192080247 0.1736031746031746 1.0 ['TLE1|p.H176Y|1|0.62|ENSG00000196781|chr9:81634148-81634148|G/A|missense_variant'] 78303 4813 PASGQLPSAS True PC9_epitope_Rep3 913.4505103666099 913.44940993586 23.608 2 -0.599482259648545 0.1736031746031746 1.0 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 5873 15621 APGQRVLVL True PC9_epitope_Rep5 951.5865503469498 951.58544993586 65.097 2 -0.5994961928600445 0.17361353607821975 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 108886 4347 TERWWQSPP True H1975_Epitope_Rep2 1185.5567067706497 1185.5550749037902 21.836 3 -0.5995008689910348 0.17361353607821975 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion', 'ENST00000370677.4_1_20:60920618-60942301:-|nuORF', 'nc|ENSG00000130702|O15230-2|LAMA5'] 127789 1584 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 8.7889 3 -0.5995527618478858 0.17363976890356167 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 73491 8956 NEYKRRKDL True H1975_Epitope_Rep3 1220.66256882152 1220.6614699358602 39.444 2 -0.5995603991906675 0.17363976890356167 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 137957 16079 YPVLLDGVM True NCI_RA007_Epitope_Rep1 1005.52050450273 1005.51940993586 66.647 2 -0.5995977034937131 0.17365012855918485 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 64400 6252 LQQVQMAGAP True PC9_epitope_Rep1 1041.5277151414898 1041.52660993586 28.861 2 -0.5996089802315734 0.17365012855918485 1.0 ['ENST00000460803.1_1_1:43851595-43852591:-|nuORF', 'nc|ENSG00000159479|Q96G25-3|MED8', 'ENSG00000159479|ENST00000372457|MED8', 'nc|ENSG00000159479|Q96G25-2|MED8'] 82343 14328 PTSVAIASI True PC9_epitope_Rep6 857.48583324617 857.48528496793 67.01 1 -0.5996240610093806 0.17365497540073005 1.0 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 79570 7668 PGTEEGPED True H1975_Epitope_Rep2 929.3614205786898 929.36032993586 34.447 2 -0.5996264154535481 0.17365497540073005 1.0 ['nc|ENSG00000103005|Q9BQ65-2|USB1', 'ENSG00000103005|ENST00000219281|USB1', 'ENST00000566292.5_1_16:58035387-58044017:+|nuORF', 'ENST00000565662.5_1_16:58035387-58051252:+|nuORF', 'nc|ENSG00000103005|Q9BQ65-3|USB1', 'ENST00000569252.5_1_16:58035387-58036554:+|nuORF', 'ENST00000563207.1_1_16:58035387-58048199:+|nuORF'] 94381 13263 RYEKIEIMP True PC9_epitope_Rep3 1177.6165301458898 1177.61488490379 56.05 3 -0.5996351100480333 0.17365497540073005 1.0 ['nc|ENSG00000104299|Q9NV88-3|INTS9', 'ENSG00000104299|ENST00000521022|INTS9', 'nc|ENSG00000104299|Q9NV88-2|INTS9', 'ENST00000520316.5_1_8:28627126-28633440:-|nuORF'] 133947 18120 WPFMYGDYIAY True H1975_Epitope_Rep1 1424.61111041228 1424.61000993586 75.495 2 -0.5996410036993418 0.17365497540073005 1.0 ['ENSG00000175931|ENST00000319380|UBE2O', 'UBE2O|p.H1018Tfs*12|1|0.15|ENSG00000175931|chr17:76392008-76392008|G/-|frameshift_variant', 'ENST00000586505.1_1_17:74398111-74401301:-|nuORF'] 133624 1346 WKERILKAK True PC9_epitope_Rep3 1170.7237125260997 1170.7220549037902 7.4319 3 -0.5996499788737976 0.17366533358725322 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 54619 10841 LADKTRRTV True PC9_epitope_Rep3 1058.61964138038 1058.61854993586 46.672 2 -0.599686793622524 0.17366533358725322 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 93065 2758 RRRKRKKRK True NCI_RA007_Epitope_Rep1 1310.8959718576996 1310.89432490379 14.595 3 -0.5997024411262202 0.17367844730452447 1.0 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 124924 16101 VLLTHLLV True PC9_epitope_Rep2 906.59023874506 906.58914993586 67.19 2 -0.5998700144714441 0.1737391690735392 1.0 ['nc|ENSG00000138613|Q8WW43-2|APH1B', 'ENSG00000138613|ENST00000261879|APH1B'] 73681 6101 NGPNTSLAS True PC9_epitope_Rep3 859.40356017419 859.40246993586 28.514 2 -0.5999621568896009 0.17376815044037133 1.0 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000499453.2_1_19:19464952-19466588:+|nuORF', 'ENST00000262816.11_1_19:19463093-19466588:+|nuORF'] 53674 7071 KWWRCFPERWF True H1975_Epitope_Rep1 1639.7870581419895 1639.78540490379 32.225 3 -0.5999829234182608 0.17378126190173923 1.0 ['nc|nan|Q6UWU4-3|C6orf89', 'ENSG00000198663|ENST00000480824|C6orf89', 'nc|nan|Q6UWU4-2|C6orf89'] 82893 20161 PVYASPGV True PC9_epitope_Rep2 788.4068546494799 788.40574993586 82.962 2 -0.6000218202176079 0.17382335205814212 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 47079 8314 IVVGASDGIIR True H1975_Epitope_Rep3 1098.6397081186199 1098.6386099358601 36.963 2 -0.6000773540580651 0.17382335205814212 1.0 ['ENSG00000137055|ENST00000397292|PLAA'] 35385 10400 GTCVNMPSGPH True H1975_Epitope_Rep1 1098.4586496054999 1098.45754993586 44.953 2 -0.6001163557364072 0.17383646201939099 1.0 ['ENSG00000131187|ENST00000253496|F12'] 125556 20055 VLYEKFFRV True PC9_epitope_Rep5 1199.6702799709099 1199.66863490379 82.196 3 -0.6002045054529849 0.17389717549984132 1.0 ['ENST00000461947.5_1_16:456939-460388:+|nuORF'] 41548 21059 IDDYFDWV True PC9_epitope_Rep2 1071.45492704071 1071.45382993586 86.458 2 -0.6002923054658531 0.17393649937324468 1.0 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1'] 20641 7883 EQFYYLTQNKK True NCI_RA007_Epitope_Rep1 1460.7299796749996 1460.72833490379 34.656 3 -0.6002930206837392 0.17393649937324468 1.0 ['ENSG00000153790|ENST00000283905|C7orf31'] 116642 14402 TYILNHSSI True PC9_epitope_Rep2 1046.5396597241802 1046.53856993586 60.661 2 -0.6003520447928856 0.17393649937324468 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2', 'nc|ENSG00000020181|Q96PE1-2|ADGRA2'] 20488 7887 EPTFRVMQQK True NCI_RA007_Epitope_Rep2 1262.6441418760598 1262.64250490379 35.31 3 -0.6003646652626496 0.17394960649911145 1.0 ['nc|ENSG00000138311|Q70YC5-4|ZNF365'] 108666 13416 TELGFLTKLQE True NCI_RA007_Epitope_Rep2 1277.68671788069 1277.68562993586 56.826 2 -0.6003833951812395 0.17395719294905357 1.0 ['ENSG00000079435|ENST00000244289|LIPE'] 128432 20787 VSEITTFLYYF True H1975_Epitope_Rep2 1381.6805698710898 1381.6794699358602 86.073 2 -0.600383641447616 0.17395719294905357 1.0 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF'] 57767 4738 LENVLIHFWER True NCI_RA007_Epitope_Rep2 1454.76703389006 1454.7653849037902 23.06 3 -0.6004092149495904 0.17395719294905357 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 128112 19343 VRRRRGAPGR True NCI_RA007_Epitope_Rep5 1179.7173387893897 1179.71624993586 81.282 2 -0.6005424640398035 0.17401789680776797 1.0 ['ENST00000306353.7_2_2:85828206-85829758:-|nuORF', 'ENST00000444380.5_1_2:85828554-85829758:-|nuORF'] 913 3376 ADQRPAGRPG True NCI_RA007_Epitope_Rep2 1023.5209899682698 1023.5198899358601 17.793 2 -0.6005946956294982 0.1740199577998826 1.0 ['ENST00000563663.5_1_15:75137426-75165648:-|nuORF'] 61155 16688 LLDGNHFKRIR True H1975_Epitope_Rep1 1367.77860163327 1367.77750993586 69.586 2 -0.6005953020701829 0.1740199577998826 1.0 ['ENST00000482108.1_2_7:94296225-94296471:+|nuORF'] 15309 19272 EAISYVREKTK True H1975_Epitope_Rep1 1322.7194149913 1322.7183099358601 80.298 2 -0.6006715557590582 0.1740199577998826 1.0 ['nc|ENSG00000138031|O60266-2|ADCY3', 'ENSG00000138031|ENST00000679454|ADCY3'] 114380 6554 TSDKKDSFYTD True H1975_Epitope_Rep1 1305.5724759740897 1305.57136993586 30.267 2 -0.6006720706010243 0.1740199577998826 1.0 ['ENSG00000111647|ENST00000279907|BLTP3B'] 118311 8038 VDDTWNPK True H1975_Epitope_Rep1 973.4505103666099 973.44940993586 35.863 2 -0.6006950783404243 0.1740199577998826 1.0 ['nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'nc|ENSG00000111224|Q9NR21-2|PARP11'] 55551 19436 LAYYHQEWTV True PC9_epitope_Rep5 1308.6138872936 1308.61225490379 79.811 3 -0.6007950617505098 0.174033061522353 1.0 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 41958 18183 IECRLCRL True PC9_epitope_Rep3 1004.5259413196799 1004.52484993586 75.147 2 -0.6008178197503462 0.1740461648290632 1.0 ['chr10:69386153-69386323|118|22.4|0.22|6.66|+|1|TE_info:MIR1_Amn,MIR1_Amn_dup6582,MIR,SINE,donor,+,69385986,69386153|None,HK1|2'] 62865 9351 LMPTELAAL True PC9_epitope_Rep4 957.5205045027299 957.51940993586 43.576 2 -0.6008615590269577 0.174059267720033 1.0 ['ENST00000477908.1_1_1:109358795-109359618:-|nuORF'] 40943 8122 HWFYTRWKDWE True NCI_RA007_Epitope_Rep1 1652.7524464550795 1652.7508049037901 35.591 3 -0.6010098215727556 0.17406684750709878 1.0 ['ENSG00000019995|ENST00000359653|ZRANB1'] 4991 12042 ALKTKERMAL True PC9_epitope_Rep5 1159.6747137283498 1159.6730549037902 51.313 3 -0.6010154675045034 0.17406684750709878 1.0 ['ENSG00000049283|ENST00000268933|EPN3', 'nc|ENSG00000049283|Q9H201-2|EPN3', 'ENST00000512291.5_1_17:48613811-48618261:+|nuORF', 'ENST00000512379.5_1_17:48610205-48619515:+|nuORF'] 41987 4697 IEDIEERTDKE True H1975_Epitope_Rep3 1375.64670354351 1375.64506490379 23.192 3 -0.6010191814747902 0.17406684750709878 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 15509 8521 EAQTENFNIK True H1975_Epitope_Rep3 1192.5724164044398 1192.5713099358602 37.762 2 -0.6011243626974065 0.17408476619503838 1.0 ['ENSG00000102189|ENST00000322349|EEA1'] 1467 3566 AEELRENLR True H1975_Epitope_Rep3 1128.58873517492 1128.5870849037901 18.69 3 -0.601136089125352 0.17408476619503838 1.0 ['ENSG00000185271|ENST00000636854|KLHL33'] 102231 7738 SPSSTTLTSA True PC9_epitope_Rep3 950.4556553167 950.45454993586 34.757 2 -0.6011366238550323 0.17408476619503838 1.0 ['ENST00000489678.1_1_14:74762662-74763162:-|nuORF'] 30608 11947 GALAKAIY True H1975_Epitope_Rep2 805.4697892592098 805.46868993586 51.032 2 -0.6011706315248229 0.17408476619503838 1.0 ['ENSG00000264424|ENST00000255381|MYH4', 'MYH4|p.K643Rfs*17|1|0.4|ENSG00000264424|chr17:10456525-10456525|T/-|frameshift_variant'] 124065 13322 VKRKVIIFLK True NCI_RA007_Epitope_Rep2 1242.8539984196598 1242.85234490379 56.457 3 -0.6011720745658243 0.17408476619503838 1.0 ['ENSG00000140471|ENST00000314742|LINS1', 'nc|ENSG00000140471|Q8NG48-3|LINS1', 'ENST00000559149.5_1_15:101113500-101121059:-|nuORF', 'nc|ENSG00000140471|Q8NG48-2|LINS1'] 33190 21370 GKVQQLHSL True PC9_epitope_Rep2 1008.5716285587998 1008.57052993586 87.669 2 -0.6012656184483632 0.17409992069785885 1.0 ['ENSG00000100558|ENST00000216446|PLEK2'] 56978 9870 LEECHSLNV True PC9_epitope_Rep3 1042.47534521546 1042.4742499358601 42.923 2 -0.6012952141325372 0.17409992069785885 1.0 ['nc|ENSG00000137672|Q9Y210-2|TRPC6', 'nc|ENSG00000137672|Q9Y210-3|TRPC6', 'ENSG00000137672|ENST00000344327|TRPC6'] 127109 14962 VQAVVPRGL True PC9_epitope_Rep3 937.5709002828098 937.56980993586 62.682 2 -0.60133962015047 0.17409992069785885 1.0 ['ENST00000478371.1_1_9:123629171-123630543:-|nuORF', 'ENST00000419155.5_1_9:123629171-123631115:-|nuORF'] 54159 22671 KYNLATEEI True PC9_epitope_Rep1 1079.54989005471 1079.5487899358602 92.008 2 -0.6013577943925847 0.17409992069785885 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9'] 23217 11251 EVQLRRPNWSK True H1975_Epitope_Rep3 1411.76843087239 1411.76732993586 48.379 2 -0.6013640708723119 0.17409992069785885 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 83 4684 AAANPWDPA True PC9_epitope_Rep5 911.4137309350699 911.41262993586 23.069 2 -0.6013692810137414 0.17409992069785885 1.0 ['nc|ENSG00000137814|Q9NVX0-3|HAUS2', 'ENSG00000137814|ENST00000260372|HAUS2'] 116123 6992 TVSSAKPGP True H1975_Epitope_Rep3 842.4497820906199 842.44868993586 31.857 2 -0.601409634020674 0.1741447399724033 1.0 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB', 'nc|ENSG00000186260|Q9ULH7-2|MRTFB', 'nc|ENSG00000186260|Q9ULH7-3|MRTFB'] 127787 1464 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 8.1195 3 -0.6014246394453424 0.17417369790014592 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 80482 7065 PLLEEEGL True PC9_epitope_Rep2 898.4647634484198 898.46366993586 32.573 2 -0.6014803988430379 0.17419989215592985 1.0 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 87151 19761 QSIPSTVTV True PC9_epitope_Rep5 930.5022115863001 930.5016649679301 81.054 1 -0.6014838486824101 0.17419989215592985 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 77969 19498 PALGPALL True PC9_epitope_Rep4 750.46397560278 750.46286993586 83.118 2 -0.6016341865185088 0.17423918042406078 1.0 ['nc|ENSG00000164050|O43157-2|PLXNB1', 'ENSG00000164050|ENST00000296440|PLXNB1', 'nc|ENSG00000164050|O43157-3|PLXNB1'] 13758 11392 DQLSKLKDER True H1975_Epitope_Rep3 1230.65681473474 1230.6557099358602 48.933 2 -0.601661710677776 0.17423918042406078 1.0 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 14533 7432 DVAQLPSRV True NCI_RA007_Epitope_Rep2 983.5399940773499 983.53888993586 33.535 2 -0.6016619398240477 0.17423918042406078 1.0 ['ENSG00000247596|ENST00000305533|TWF2'] 108615 4825 TEIQKDQREE True H1975_Epitope_Rep2 1274.61025846514 1274.60916993586 23.65 2 -0.6016701164401738 0.1742467491278148 1.0 ['ENSG00000147183|ENST00000276127|CPXCR1'] 37047 17954 GVSDVDYSL True PC9_epitope_Rep5 953.43419159613 953.43308993586 74.076 2 -0.6016783764850367 0.1742467491278148 1.0 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1', 'ETNK1|p.T296Lfs*8|1|0.24|ENSG00000139163|chr12:22673598-22673598|G/-|frameshift_variant'] 21322 13728 ERKYREWYEKY True NCI_RA007_Epitope_Rep2 1648.7997905703196 1648.79868993586 58.045 2 -0.6016831165071287 0.1742467491278148 1.0 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 96494 18447 SELAVLLNLL True PC9_epitope_Rep4 1083.65396120043 1083.65286993586 79.027 2 -0.6017065163029649 0.17425984364345634 1.0 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 64819 21814 LSAEYEKVELP True PC9_epitope_Rep1 1276.6550833992399 1276.6539899358602 88.717 2 -0.6017252393333649 0.17427293774380767 1.0 ['nc|ENSG00000131016|Q02952-3|AKAP12', 'nc|ENSG00000131016|Q02952-2|AKAP12', 'ENSG00000131016|ENST00000402676|AKAP12'] 38281 8792 HFHFTARYIRI True PC9_epitope_Rep2 1459.7836870137098 1459.78204490379 39.172 3 -0.6018106182181371 0.17428050424165545 1.0 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 11218 10199 DEMIGKIIK True PC9_epitope_Rep5 1045.58416738845 1045.58306993586 44.22 2 -0.6018137529114751 0.17428050424165545 1.0 ['ENSG00000216937|ENST00000639629|CCDC7', 'nc|ENSG00000216937|Q96M83-2|CCDC7', 'nc|ENSG00000216937|Q96M83-4|CCDC7', 'nc|ENSG00000216937|Q96M83-3|CCDC7', 'nc|ENSG00000216937|Q96M83-5|CCDC7'] 42540 6968 IESDSPDKYK True NCI_RA007_Epitope_Rep2 1180.5611830144 1180.56008993586 31.725 2 -0.6018350119365254 0.17428050424165545 1.0 ['ENSG00000154783|ENST00000285046|FGD5'] 28621 10111 FSRMKPASP True PC9_epitope_Rep2 1019.5222358382298 1019.52112993586 44.229 2 -0.60189985014592 0.17430392592122787 1.0 ['ENSG00000145246|ENST00000273859|ATP10D'] 125200 12344 VLQKKSILKKK True NCI_RA007_Epitope_Rep5 1311.8965915076294 1311.89548993586 54.13 2 -0.6019031937224325 0.17430392592122787 1.0 ['ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 37948 8968 HEENPESI True PC9_epitope_Rep1 953.4090394774499 953.40794993586 39.34 2 -0.6019245407750269 0.17430392592122787 1.0 ['ENSG00000103126|ENST00000262320|AXIN1', 'nc|ENSG00000103126|O15169-2|AXIN1', 'ENST00000461023.5_1_16:343426-396314:-|nuORF'] 33351 15545 GLEAKLLQTV True PC9_epitope_Rep2 1070.63356010902 1070.6324699358602 65.066 2 -0.6019623904591389 0.17433010940225147 1.0 ['ENSG00000100372|ENST00000435456|SLC25A17', 'MKL1-SLC25A17|1|fusion', 'ENST00000447566.5_1_22:41166840-41215302:-|nuORF'] 45766 3327 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 17.571 2 -0.6019694289980497 0.17433010940225147 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 99874 18023 SLHIDGKIF True PC9_epitope_Rep5 1028.5654805492 1028.5643899358602 74.342 2 -0.601986858731332 0.17434320052004884 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'LYST|p.L2265Ifs*29|1|0.34|ENSG00000143669|chr1:235759054-235759060|CAACAAG/-|frameshift_variant'] 79603 10050 PGWENCQRP True PC9_epitope_Rep1 1085.47126289453 1085.4701699358602 43.525 2 -0.6020435639940794 0.17435629122272958 1.0 ['ENST00000590408.1_1_19:33980916-34002000:-|nuORF'] 113473 10252 TQRLRWLRGRP True NCI_RA007_Epitope_Rep2 1437.8429332253297 1437.84127490379 44.471 3 -0.6021151300842873 0.17439832577607256 1.0 ['ENST00000608354.1_1_22:30642479-30642794:+|nuORF'] 59997 4117 LHQGHRQRP True NCI_RA007_Epitope_Rep5 1127.6060570049099 1127.60440490379 22.325 3 -0.602120416327307 0.17439832577607256 1.0 ['ENST00000377625.6_1_13:75900405-75901937:-|nuORF'] 44707 8002 IPPAVTSPSP True H1975_Epitope_Rep2 964.52294703088 964.52184993586 35.727 2 -0.6021781823958252 0.17443685303489054 1.0 ['ENSG00000196531|ENST00000454682|NACA'] 73054 21096 NDLAVAYIL True PC9_epitope_Rep5 990.5385970950199 990.53750993586 86.209 2 -0.6021790036255289 0.17443685303489054 1.0 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-7|PARPBP', 'nc|ENSG00000185480|Q9NWS1-6|PARPBP'] 117725 8467 VALAVSTT True PC9_epitope_Rep1 760.4330693973201 760.43196993586 37.404 2 -0.6022350816902232 0.17443685303489054 1.0 ['SDC3|p.S189Afs*15|1|0.13|ENSG00000162512|chr1:30876858-30876858|G/-|frameshift_variant', 'ENSG00000162512|ENST00000339394|SDC3'] 9053 16221 AVIRPIIAT True PC9_epitope_Rep4 952.6069514383599 952.60584993586 70.337 2 -0.6022389672200394 0.17443685303489054 1.0 ['RBM42|p.P81A|1|0.08|ENSG00000126254|chr19:35629632-35629632|C/G|missense_variant'] 128095 15474 VRRRARRHEPL True NCI_RA007_Epitope_Rep5 1444.8599802718 1444.8588899358601 66.218 2 -0.6022403921260956 0.17443685303489054 1.0 ['ENST00000575334.5_3_16:4463394-4466616:-|nuORF', 'ENST00000575038.5_1_16:4463394-4466818:-|nuORF'] 11221 12556 DENDWNEKLY True H1975_Epitope_Rep2 1324.5571602631198 1324.55606993586 53.391 2 -0.6022408475805558 0.17443685303489054 1.0 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB'] 85753 15662 QLVESGNPAL True PC9_epitope_Rep6 1026.53457434374 1026.53346993586 72.45 2 -0.6022422960243614 0.17443685303489054 1.0 ['nc|ENSG00000278311|Q9H3C7-2|GGNBP2', 'nc|ENSG00000278311|Q9H3C7-3|GGNBP2', 'ENSG00000278311|ENST00000613102|GGNBP2'] 19488 15402 ELQFRLGP True PC9_epitope_Rep2 958.5236157372199 958.52250993586 64.525 2 -0.6022482238373329 0.17443685303489054 1.0 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 60361 15257 LIHWPMGFKP True PC9_epitope_Rep1 1224.6477707045199 1224.6461249037902 63.506 3 -0.6022517028795175 0.17443685303489054 1.0 ['nc|ENSG00000165568|Q96JD6-4|AKR1E2', 'ENSG00000165568|ENST00000298375|AKR1E2', 'nc|ENSG00000165568|Q96JD6-5|AKR1E2', 'nc|ENSG00000165568|Q96JD6-3|AKR1E2', 'nc|ENSG00000165568|Q96JD6-2|AKR1E2'] 19822 6213 ELTSEENKIP True PC9_epitope_Rep2 1158.57683307854 1158.5757299358602 29.296 2 -0.6022862546738391 0.17446026059664585 1.0 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1'] 3204 8237 AGEQLGFDY True H1975_Epitope_Rep3 998.4345259492998 998.43342993586 36.667 2 -0.6022863028115601 0.17446026059664585 1.0 ['ENSG00000181090|ENST00000460843|EHMT1', 'ENST00000475704.2_1_9:140728608-140729402:+|nuORF', 'ENST00000475564.5_1_9:140711834-140729402:+|nuORF', 'ENST00000494249.5_1_9:140710377-140729402:+|nuORF'] 56224 16629 LDPQQQLVP True PC9_epitope_Rep1 1036.5553097883198 1036.5542099358602 68.792 2 -0.6023101395632169 0.17446026059664585 1.0 ['KCNJ3|p.Q31L|1|0.24|ENSG00000162989|chr2:154698867-154698867|A/T|missense_variant'] 102107 5265 SPQGPAVP True NCI_RA007_Epitope_Rep3 751.3864535580699 751.38534993586 27.713 2 -0.6023864779895627 0.1746160064672595 1.0 ['ENST00000589420.1_1_18:32821016-32837899:+|nuORF', 'nc|ENSG00000186812|Q8NF99-3|ZNF397', 'nc|ENSG00000186812|Q8NF99-2|ZNF397', 'ENSG00000186812|ENST00000330501|ZNF397'] 6000 14519 APLKQWAVGT True PC9_epitope_Rep6 1069.5920296502097 1069.59092993586 67.732 2 -0.6024032951181085 0.17462908952574183 1.0 ['ENST00000377861.4_3_13:67776616-67776682:-|nuORF'] 115857 5026 TVNPQSPLEN True NCI_RA007_Epitope_Rep3 1097.53530261973 1097.5342099358602 26.764 2 -0.6024428109776668 0.17465802279319692 1.0 ['ENST00000505365.2_1_19:35175556-35175631:+|nuORF'] 105124 9858 STLPKSLSL True PC9_epitope_Rep4 944.55424715916 944.55314993586 45.568 2 -0.6025270264375231 0.17467110477096212 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 10795 4769 DADREVSSL True PC9_epitope_Rep3 990.4618033262999 990.46070993586 23.436 2 -0.6025797618021446 0.17468141761237557 1.0 ['ENSG00000177354|ENST00000374144|C10orf71', 'nc|ENSG00000177354|Q711Q0-3|CEFIP'] 3677 15982 AGRRRRRRW True NCI_RA007_Epitope_Rep2 1268.7551212804397 1268.7540299358602 66.883 2 -0.6025966373947751 0.17468141761237557 1.0 ['ENST00000531211.1_1_8:70772071-70772629:-|nuORF'] 124414 7143 VLEHESEKVKE True H1975_Epitope_Rep1 1325.68269512941 1325.68158993586 32.5 2 -0.6026708599057722 0.17474958792950424 1.0 ['ENSG00000273820|ENST00000621775|USP27X'] 42700 9575 IEWPEHPNKIY True H1975_Epitope_Rep2 1424.7088503076 1424.7072149037901 41.804 3 -0.6026809799467147 0.17474958792950424 1.0 ['TACR1|p.Q285Afs*26|1|0.49|ENSG00000115353|chr2:75051331-75051332|-/T|frameshift_variant', 'nc|ENSG00000115353|P25103-3|TACR1', 'ENSG00000115353|ENST00000305249|TACR1'] 5545 6193 ANGPRGERQT True NCI_RA007_Epitope_Rep5 1084.5373683084 1084.5362699358602 30.5 2 -0.6027056180413592 0.17474958792950424 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.R2185W|1|0.18|ENSG00000173898|chr11:66687596-66687596|G/A|missense_variant'] 63331 10847 LPDYFPERSR True PC9_epitope_Rep5 1278.6356853673399 1278.63403490379 46.711 3 -0.602754243705149 0.17474958792950424 1.0 ['ENSG00000178695|ENST00000377474|KCTD12'] 113452 20046 TQPLSHSNQMP True PC9_epitope_Rep1 1238.57137085862 1238.57026993586 81.933 2 -0.6029651371508304 0.17480467202332842 1.0 ['ENSG00000116128|ENST00000234739|BCL9'] 4915 17984 ALGSFLLNSL True PC9_epitope_Rep1 1033.58079626017 1033.5796899358602 73.969 2 -0.6029870845005167 0.17480467202332842 1.0 ['ENST00000577886.5_1_17:15546108-15546210:-|nuORF'] 46218 13465 ITDPANEKLLT True H1975_Epitope_Rep3 1213.65541775241 1213.65432993586 57.067 2 -0.6030092351598206 0.17480467202332842 1.0 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'ENST00000505378.5_1_4:99182716-99313239:+|nuORF', 'ENST00000507303.5_1_4:99182716-99313239:+|nuORF', 'ENST00000503745.1_1_4:99273670-99308609:+|nuORF', 'ENST00000511379.5_1_4:99182716-99300325:+|nuORF'] 33429 9557 GLGELVWGQ True H1975_Epitope_Rep2 957.4919812557698 957.4914349679301 41.735 1 -0.6030472162006021 0.17483359746434232 1.0 ['nc|ENSG00000157087|Q01814-4|ATP2B2', 'nc|ENSG00000157087|Q01814-7|ATP2B2', 'nc|ENSG00000157087|Q01814-3|ATP2B2', 'nc|ENSG00000157087|Q01814-6|ATP2B2', 'nc|ENSG00000157087|Q01814-2|ATP2B2', 'nc|ENSG00000157087|Q01814-8|ATP2B2', 'nc|ENSG00000157087|Q01814-5|ATP2B2', 'ENSG00000157087|ENST00000360273|ATP2B2'] 124744 9517 VLKKKKKKKK True PC9_epitope_Rep2 1254.92274668582 1254.9211049037901 41.954 3 -0.6030676888638435 0.174843903521283 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 111205 14092 TLFPQPHCLP True PC9_epitope_Rep2 1151.57975071435 1151.57864993586 59.478 2 -0.6030794284888752 0.174843903521283 1.0 ['nc|ENSG00000071564|P15923-3|TCF3'] 14356 5268 DTEDINKPKK True H1975_Epitope_Rep2 1186.6193665968597 1186.61773490379 25.331 3 -0.6030914656760833 0.17485697985832685 1.0 ['ENSG00000173145|ENST00000371361|NOC3L'] 30280 9629 GAAPGVVAV True PC9_epitope_Rep2 739.42283906679 739.42229496793 42.379 1 -0.6032059790369126 0.17489343495967166 1.0 ['ENST00000491511.6_1_3:101498309-101498384:+|nuORF'] 8033 6131 ATDTASWAS True NCI_RA007_Epitope_Rep3 908.38757575688 908.38646993586 31.105 2 -0.6032183589194544 0.17489343495967166 1.0 ['XPNPEP2|p.P653T|2|0.23|ENSG00000122121|chrX:129768417-129768417|C/A|missense_variant'] 14289 9318 DTAHCMQH True H1975_Epitope_Rep2 941.3483708805302 941.34726993586 40.802 2 -0.6032289739361708 0.17489343495967166 1.0 ['ENST00000309415.7_1_2:110261380-110261551:+|nuORF'] 36898 8025 GVQQYISI True PC9_epitope_Rep1 906.4810822188999 906.47998993586 35.689 2 -0.6032387929139481 0.17489343495967166 1.0 ['nc|ENSG00000197506|Q9HAS3-2|SLC28A3', 'ENSG00000197506|ENST00000376238|SLC28A3'] 99705 15275 SLGERINTL True PC9_epitope_Rep3 1001.55055876105 1001.54946993586 63.907 2 -0.6032565110805289 0.1749223553273753 1.0 ['ENSG00000171303|ENST00000302909|KCNK3'] 96796 2730 SERRRPRRLRK True NCI_RA007_Epitope_Rep2 1508.9236431575198 1508.92145987172 14.845 4 -0.603283882156795 0.17492988543993915 1.0 ['ENST00000320225.9_2_16:2314685-2318195:-|nuORF'] 115175 7015 TVALRGAVTL True PC9_epitope_Rep4 999.60767971435 999.60658993586 34.23 2 -0.6033096604275527 0.17492988543993915 1.0 ['nc|ENSG00000163626|Q8N8Q8-2|COX18', 'nc|ENSG00000163626|Q8N8Q8-3|COX18', 'ENST00000421792.2_1_4:73934271-73935366:-|nuORF', 'nc|ENSG00000163626|Q8N8Q8-4|COX18', 'nc|ENSG00000163626|Q8N8Q8|COX18', 'ENSG00000163626|ENST00000507544|COX18'] 127786 1342 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 7.445 3 -0.6033107784347128 0.17492988543993915 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 102887 4230 SQICPGFVIQ True H1975_Epitope_Rep3 1090.5481162329 1090.5470099358602 21.389 2 -0.6033924140789193 0.17497187584174417 1.0 ['ENSG00000161551|ENST00000638348|ZNF577'] 78351 7763 PATLSQTIV True H1975_Epitope_Rep2 928.52294703088 928.52184993586 34.808 2 -0.603439355672469 0.17497187584174417 1.0 ['ENSG00000115718|ENST00000234071|PROC', 'nc|ENSG00000115718|P04070-2|PROC'] 13617 6962 DPSSSSHITL True PC9_epitope_Rep3 1042.4931034545803 1042.49200993586 31.791 2 -0.6034740276452045 0.17499801948823576 1.0 ['ENST00000513237.5_1_4:106194042-106196375:+|nuORF'] 83139 6776 PYRQRDPR True NCI_RA007_Epitope_Rep4 1086.56827451386 1086.5671699358602 32.683 2 -0.6034934623970925 0.17499801948823576 1.0 ['ENST00000526508.5_1_11:46694742-46694910:+|nuORF'] 54924 6330 LAGRKRFVAP True NCI_RA007_Epitope_Rep5 1113.6770966868498 1113.6759899358601 31.025 2 -0.6036503474020828 0.17504277837632296 1.0 ['nc|ENSG00000164694|Q4ZHG4-2|FNDC1', 'ENSG00000164694|ENST00000297267|FNDC1'] 28839 12822 FTDMVWQP True PC9_epitope_Rep1 1022.4531532188998 1022.4520499358599 54.194 2 -0.6037202408077901 0.17505584866200866 1.0 ['ENST00000263856.8_1_2:86732031-86732436:-|nuORF'] 78344 7434 PATHSGPH True PC9_epitope_Rep3 802.3722004762601 802.37110993586 33.6 2 -0.6037738195674068 0.17507366686733628 1.0 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant'] 99241 11782 SLCSDSEEEMK True H1975_Epitope_Rep3 1256.4900688730797 1256.48896993586 50.464 2 -0.6037921898929862 0.17507366686733628 1.0 ['chr12:85876701-85882223|342|165.25|0.56|8.2|+|ENST00000551529|NTS,NTS', 'ENSG00000133636|ENST00000256010|NTS'] 44435 13269 INITAVAQV True PC9_epitope_Rep3 927.5389314481898 927.53782993586 56.074 2 -0.6038052182459227 0.17507366686733628 1.0 ['ITGA8|p.R1043Dfs*7|2|0.14|ENSG00000077943|chr10:15517224-15517224|G/-|frameshift_variant', 'ENSG00000077943|ENST00000378076|ITGA8'] 100272 10311 SLLRLPWCLRP True NCI_RA007_Epitope_Rep2 1352.7750964759598 1352.77398993586 44.697 2 -0.6038718085858431 0.17507366686733628 1.0 ['ENST00000245407.7_1_5:131726498-131729479:+|nuORF'] 108778 4959 TEPSTAKPSPP True H1975_Epitope_Rep3 1110.5557037111398 1110.55460993586 24.202 2 -0.6038784879942909 0.17507366686733628 1.0 ['PPP1R10|p.S337P|1|0.05|ENSG00000204569|chr6:30604681-30604681|A/G|missense_variant'] 70724 10559 MDYDSYQHYFY True H1975_Epitope_Rep1 1530.5761814555403 1530.57454490379 45.567 3 -0.6039635004242513 0.17513426167957796 1.0 ['ENSG00000116990|ENST00000372816|MYCL', 'nc|ENSG00000116990|P12524-3|MYCL', 'nc|ENSG00000116990|P12524-2|MYCL'] 82980 17693 PYDQSGFVSAI True PC9_epitope_Rep4 1182.5557037111398 1182.55460993586 76.081 2 -0.603994563001041 0.17515207198073754 1.0 ['nc|ENSG00000104960|Q86YD1-2|PTOV1', 'ENSG00000104960|ENST00000391842|PTOV1', 'ENST00000595934.1_1_19:50360240-50360429:+|nuORF', 'ENST00000498792.1_1_3:120025975-120026458:+|nuORF', 'ENST00000596424.1_1_19:50360315-50362048:+|nuORF', 'nc|ENSG00000104960|Q86YD1-3|PTOV1'] 128350 3906 VSDPLDEEKKE True NCI_RA007_Epitope_Rep2 1287.6194261665098 1287.6183299358602 19.828 2 -0.604005760512189 0.17515207198073754 1.0 ['nc|ENSG00000092200|Q96KN7-3|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-2|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-5|RPGRIP1', 'ENSG00000092200|ENST00000400017|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-4|RPGRIP1'] 22918 9151 EVFTEMEEK True NCI_RA007_Epitope_Rep5 1140.50089125696 1140.49924490379 41.848 3 -0.6040258548072581 0.17515207198073754 1.0 ['nc|ENSG00000160201|Q01081-4|U2AF1', 'nc|ENSG00000160201|Q01081-2|U2AF1', 'ENSG00000160201|ENST00000291552|U2AF1'] 40622 9791 HTFCDRQKP True NCI_RA007_Epitope_Rep1 1130.52911212382 1130.5280099358602 42.088 2 -0.604037179282792 0.17515207198073754 1.0 ['ENST00000491239.2_1_1:27614218-27630434:+|nuORF', 'nc|ENSG00000142784|Q8N5D0-5|WDTC1', 'nc|ENSG00000142784|Q8N5D0-3|WDTC1', 'nc|ENSG00000142784|Q8N5D0-6|WDTC1', 'nc|ENSG00000142784|Q8N5D0-2|WDTC1', 'nc|ENSG00000142784|Q8N5D0-4|WDTC1', 'ENSG00000142784|ENST00000319394|WDTC1', 'STX12-WDTC1|1|fusion'] 48469 12765 KEEQRKLREER True H1975_Epitope_Rep3 1499.8168376167898 1499.8157499358601 54.314 2 -0.604066148738217 0.17515207198073754 1.0 ['ENST00000468597.5_1_22:38082399-38086802:+|nuORF', 'ENST00000493862.5_1_22:38077834-38087340:+|nuORF', 'ENSG00000273899|ENST00000359114|NOL12'] 118967 15142 VEEYVYEFRDK True H1975_Epitope_Rep3 1475.6932598131095 1475.6921699358602 63.643 2 -0.6041196663747354 0.17518097863105705 1.0 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 80577 15867 PLNQPLVAS True PC9_epitope_Rep5 937.5232813840499 937.52218993586 66.024 2 -0.6041480884867385 0.17519404403611596 1.0 ['nc|ENSG00000163374|Q9H869-5|YY1AP1', 'nc|ENSG00000163374|Q9H869-6|YY1AP1', 'ENST00000436865.5_1_1:155629450-155649007:-|nuORF', 'nc|ENSG00000163374|Q9H869-4|YY1AP1', 'nc|ENSG00000163374|Q9H869-3|YY1AP1', 'ENSG00000163374|ENST00000355499|YY1AP1', 'nc|ENSG00000163374|Q9H869|YY1AP1', 'nc|ENSG00000163374|Q9H869-8|YY1AP1', 'nc|ENSG00000163374|Q9H869-9|YY1AP1', 'nc|ENSG00000163374|Q9H869-7|YY1AP1', 'ENST00000442834.6_1_1:155629450-155640310:-|nuORF', 'ENST00000500626.2_1_1:155619824-155629984:-|nuORF'] 124195 13772 VLAGFGGLNK True PC9_epitope_Rep2 974.5549158654999 974.55380993586 58.259 2 -0.6042060536693187 0.17520710902726078 1.0 ['ENSG00000171724|ENST00000302536|VAT1L'] 115455 11103 TVFRYNRPP True H1975_Epitope_Rep1 1148.60907669668 1148.6079699358602 47.672 2 -0.6042283557947389 0.17523601343217385 1.0 ['ENSG00000143382|ENST00000271643|ADAMTSL4', 'nc|ENSG00000143382|Q6UY14-3|ADAMTSL4', 'nc|ENSG00000143382|Q6UY14-2|ADAMTSL4'] 16078 9225 EEDFFLGPSGP True NCI_RA007_Epitope_Rep5 1193.5240692296898 1193.5229699358601 42.134 2 -0.6042531277642774 0.1752621408432857 1.0 ['nc|ENSG00000117533|O75379-2|VAMP4'] 56962 11304 LEDVTPIP True H1975_Epitope_Rep1 882.46984882886 882.46930496793 48.459 1 -0.6042698545805211 0.1752621408432857 1.0 ['ENST00000518139.5_1_5:149823851-149824075:-|nuORF'] 61452 14546 LLFALSLLK True NCI_RA007_Epitope_Rep5 1016.66340368532 1016.66230993586 62.626 2 -0.6043414565963166 0.1752882665990877 1.0 ['ENST00000490035.6_1_3:116164040-116164325:-|nuORF'] 100831 5701 SLSADGLR True NCI_RA007_Epitope_Rep2 817.42938099921 817.42828993586 26.791 2 -0.6043864443065363 0.1752882665990877 1.0 ['ENST00000393668.3_1_11:71991299-71991795:+|nuORF'] 63652 17176 LPNRKCFLT True PC9_epitope_Rep5 1090.59573513166 1090.5946299358602 71.09 2 -0.6044702847333475 0.17530132885629662 1.0 ['nc|ENSG00000163219|P42331-5|ARHGAP25', 'nc|ENSG00000163219|P42331-3|ARHGAP25', 'nc|ENSG00000163219|P42331-6|ARHGAP25', 'nc|ENSG00000163219|P42331|ARHGAP25', 'ENSG00000163219|ENST00000409202|ARHGAP25'] 119092 21785 VEHVVHDSVV True PC9_epitope_Rep3 1118.5720224816198 1118.57092993586 89.095 2 -0.6045098271943878 0.175330229022142 1.0 ['ZFX|p.I769Tfs*26|1|0.76|ENSG00000005889|chrX:24211262-24211265|CATT/-|frameshift_variant', 'ENSG00000005889|ENST00000304543|ZFX', 'nc|ENSG00000005889|P17010-3|ZFX'] 63605 20607 LPLPPPQLSI True PC9_epitope_Rep1 1073.6484818971699 1073.64738993586 84.081 2 -0.6045373233498343 0.17533773617776088 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 75547 11233 NQLKIVEI True NCI_RA007_Epitope_Rep4 955.57023157647 955.56912993586 50.099 2 -0.6045479043287847 0.17533773617776088 1.0 ['nc|ENSG00000133401|O15018-2|PDZD2', 'ENSG00000133401|ENST00000438447|PDZD2'] 83794 6602 QEELKNRYQSF True NCI_RA007_Epitope_Rep1 1440.69974217588 1440.6986499358602 29.694 2 -0.6045874769693078 0.17533773617776088 1.0 ['ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000167165|P19224-3|UGT1A6', 'chr2:233691820-233693004|437|32.66|0.83|5.3|+|ENST00000441351|UGT1A6,UGT1A6'] 96207 13027 SEEKKRYLWFY True NCI_RA007_Epitope_Rep1 1547.77726422059 1547.77561490379 54.665 3 -0.6046088527785458 0.17535079661714864 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G', 'PIK3C2G|p.K900Rfs*29|1|0.36|ENSG00000139144|chr12:18491461-18491462|AG/-|frameshift_variant', 'PIK3C2G|p.G1094Efs*4|1|0.24|ENSG00000139144|chr12:18505418-18505418|G/-|frameshift_variant'] 111648 11480 TLNVWPLYIC True NCI_RA007_Epitope_Rep1 1220.6263665535998 1220.6252699358602 48.619 2 -0.6046392823877893 0.17539553077934214 1.0 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'nc|ENSG00000170242|Q96K76-3|USP47', 'ENST00000305481.10_1_11:11973309-11977719:+|nuORF'] 126543 4797 VPPDSQGAQEP True H1975_Epitope_Rep2 1123.51456717515 1123.51346993586 23.541 2 -0.6047056750180261 0.175431928674363 1.0 ['ENSG00000267909|ENST00000599174|CCDC177'] 39209 11727 HLGVPISI True H1975_Epitope_Rep2 834.4963383602201 834.49524993586 50.181 2 -0.6047092853149797 0.175431928674363 1.0 ['ENSG00000181004|ENST00000314218|BBS12'] 136066 18371 YFWRRHPQLQR True H1975_Epitope_Rep3 1585.83784784489 1585.83674993586 77.008 2 -0.6047241554980363 0.175431928674363 1.0 ['ENST00000528662.6_1_11:102584081-102593757:-|nuORF', 'ENSG00000118113|ENST00000236826|MMP8'] 12841 4967 DLKRQKVI True NCI_RA007_Epitope_Rep3 998.6236641316598 998.62256993586 26.535 2 -0.6047409213395013 0.175431928674363 1.0 ['nc|ENSG00000122483|Q5T9S5-2|CCDC18', 'nc|ENSG00000122483|Q5T9S5|CCDC18', 'ENSG00000122483|ENST00000690025|CCDC18'] 89813 8998 RFHCDPTF True PC9_epitope_Rep1 1021.4439855175299 1021.44288993586 39.458 2 -0.6048230332324985 0.17544220811097563 1.0 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 68661 5129 LVATLPGV True H1975_Epitope_Rep1 768.47454028648 768.47344993586 24.798 2 -0.6048334341220174 0.17544220811097563 1.0 ['ENST00000467451.1_1_X:153196080-153197612:-|nuORF'] 111530 13231 TLLRTVYSVL True PC9_epitope_Rep2 1163.69140933831 1163.68975490379 56.171 3 -0.6048704045112875 0.17546832195848047 1.0 ['ENSG00000119514|ENST00000375011|GALNT12', 'ENSG00000139629|ENST00000356317|GALNT6'] 25706 11364 FFHFFSSL True NCI_RA007_Epitope_Rep4 1030.4912529797798 1030.49014993586 50.626 2 -0.6048819172206565 0.17546832195848047 1.0 ['ENST00000556419.5_1_14:23468454-23479348:-|nuORF'] 62480 23552 LLSNKELIL True PC9_epitope_Rep1 1041.64339651673 1041.6422899358602 95.385 2 -0.6049719669337619 0.1754813782619711 1.0 ['nc|ENSG00000119703|Q53FD0-2|ZC2HC1C', 'ENSG00000119703|ENST00000524913|ZC2HC1C'] 121342 4320 VGHRATAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 23.668 2 -0.6049798388885113 0.1754944341519801 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 45463 8726 ISEIDEDAFRK True NCI_RA007_Epitope_Rep5 1321.6513950011297 1321.6502899358602 40.23 2 -0.6050711336529596 0.17555970740048765 1.0 ['ENSG00000083782|ENST00000261172|EPYC'] 99557 4708 SLFDSHDSMYP True H1975_Epitope_Rep3 1297.52850298713 1297.52686490379 23.234 3 -0.6050726549160732 0.17555970740048765 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-2|QRICH2'] 17656 4943 EHRGPVQVT True PC9_epitope_Rep4 1021.53049202281 1021.52938993586 25.616 2 -0.605104879294139 0.17555970740048765 1.0 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'chr19:38596001-38596078|190|16.73|0.04|8.81|-|2|MAP4K1,None|3', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF'] 13660 5042 DQALIKQT True NCI_RA007_Epitope_Rep2 915.50254593947 915.50144993586 24.236 2 -0.6051167553207872 0.17555970740048765 1.0 ['nc|ENSG00000170448|Q6ZNB6-2|NFXL1', 'ENSG00000170448|ENST00000507489|NFXL1'] 115784 18386 TVLVGEYLSI True PC9_epitope_Rep2 1092.60667665484 1092.60556993586 76.052 2 -0.6051236895644762 0.17555970740048765 1.0 ['ENSG00000166959|ENST00000300226|MS4A8'] 125774 13492 VNIWNPKRKLQ True H1975_Epitope_Rep1 1394.81465278882 1394.81354993586 57.016 2 -0.605189080372814 0.17557276081001916 1.0 ['ENST00000592676.1_1_17:74731222-74731732:-|nuORF', 'ENST00000392485.2_1_17:74731675-74731732:-|nuORF'] 101415 2743 SNKETDPPP True H1975_Epitope_Rep2 983.4559896698698 983.45488993586 14.593 2 -0.605203243405543 0.17558581380620647 1.0 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2', 'ENST00000440623.5_1_2:182756982-182781157:+|nuORF'] 48026 18293 KAKWLTPKKNV True PC9_epitope_Rep4 1311.8026911227898 1311.80104490379 78.433 3 -0.6052261134827293 0.17559608625439346 1.0 ['ENSG00000167785|ENST00000601372|ZNF558', 'ENST00000597304.5_1_19:8921959-8932201:-|nuORF', 'nc|ENSG00000167785|Q96NG5-2|ZNF558'] 36720 14435 GVNGEIFYSL True PC9_epitope_Rep3 1097.53932537101 1097.53822993586 60.629 2 -0.6052446455752679 0.17559608625439346 1.0 ['PCDHB8|p.S279F|1|0.15|ENSG00000120322|chr5:141178870-141178870|C/T|missense_variant'] 90746 11062 RKQRNEQYQK True NCI_RA007_Epitope_Rep2 1376.7272943363998 1376.72618993586 47.624 2 -0.6052822155682402 0.17560913826132388 1.0 ['ENSG00000165923|ENST00000525123|AGBL2', 'nc|ENSG00000165923|Q5U5Z8-3|AGBL2', 'nc|ENSG00000165923|Q5U5Z8-2|AGBL2'] 68237 10851 LTQVLPTNP True PC9_epitope_Rep1 981.5494961318899 981.54838993586 46.624 2 -0.605351303055791 0.17562218985498068 1.0 ['nc|ENSG00000130558|Q99784-3|OLFM1', 'nc|ENSG00000130558|Q99784-4|OLFM1'] 123393 16573 VIDEWTEKAL True PC9_epitope_Rep1 1202.6183039676998 1202.61720993586 68.571 2 -0.6053864772041267 0.17562689969604864 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000557005.1_1_14:64469755-64489638:+|nuORF'] 133429 10419 WFWWYWQKEKI True H1975_Epitope_Rep3 1698.8347195270596 1698.83362993586 45.135 2 -0.6053881211349081 0.17562689969604864 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 12007 10917 DIAQSRVEI True PC9_epitope_Rep4 1029.5454733806098 1029.54436993586 49.761 2 -0.6054085818698373 0.17562689969604864 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'ENST00000547491.1_1_12:112186933-112194274:+|nuORF', 'ENST00000512792.2_1_12:112191278-112193633:+|nuORF'] 14505 10358 DTWGSFSLTL True H1975_Epitope_Rep2 1125.53423999057 1125.5331499358601 44.85 2 -0.6054228757054744 0.17562689969604864 1.0 ['ENSG00000088298|ENST00000374492|EDEM2'] 120185 21684 VFLKPWIF True PC9_epitope_Rep1 1048.6109741896398 1048.6098699358602 88.235 2 -0.6054397087212439 0.17563994997546264 1.0 ['nc|ENSG00000167920|Q8N816-2|KRT10-AS1', 'nc|ENSG00000167920|Q8N816|KRT10-AS1'] 55707 8262 LDDFEDKVFYR True H1975_Epitope_Rep3 1445.6826951294097 1445.68158993586 36.766 2 -0.6055751583005019 0.17568466044008232 1.0 ['ENSG00000119922|ENST00000371826|IFIT2'] 80773 9552 PLSLMNDWK True H1975_Epitope_Rep3 1102.5481162329 1102.5470099358602 41.75 2 -0.6056895848418175 0.17580851973215558 1.0 ['ENSG00000196700|ENST00000369888|ZNF512B'] 129982 4201 VTPDYHLNSEK True NCI_RA007_Epitope_Rep4 1301.62518025329 1301.62354490379 22.467 3 -0.6057118913963023 0.17582156651681125 1.0 ['RYR3|p.Y1355N|1|0.35|ENSG00000198838|chr15:33649156-33649156|T/A|missense_variant'] 128765 10365 VSQKVLPP True PC9_epitope_Rep3 866.5225531080598 866.52144993586 44.813 2 -0.6057211972363659 0.1758346128884175 1.0 ['ENST00000413631.1_1_13:111590511-111591024:+|nuORF'] 115159 9126 TVAEPHAEPPP True H1975_Epitope_Rep2 1143.5560380643099 1143.5549499358601 40.055 2 -0.6058615661275599 0.1759268053313072 1.0 ['ENST00000476718.1_1_1:1289695-1290347:-|nuORF', 'nc|ENSG00000162576|Q9BRK3-4|MXRA8', 'nc|ENSG00000162576|Q9BRK3-3|MXRA8', 'ENSG00000162576|ENST00000309212|MXRA8', 'nc|ENSG00000162576|Q9BRK3-2|MXRA8'] 71604 19261 MLKRQRSL True PC9_epitope_Rep5 1030.6069685216999 1030.60586993586 79.128 2 -0.605945265847087 0.175937064708117 1.0 ['ENSG00000107968|ENST00000263056|MAP3K8', 'nc|ENSG00000107968|P41279-2|MAP3K8'] 46098 8569 ITAAINKEFSN True H1975_Epitope_Rep2 1206.6244519773 1206.62334993586 37.914 2 -0.6059795117896969 0.175937064708117 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 9096 17503 AVLDRNVAI True PC9_epitope_Rep3 969.5607295219299 969.55962993586 72.503 2 -0.6060196898676172 0.17594732343537306 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 137646 20432 YLYARPFTPFP True PC9_epitope_Rep3 1370.7023083751797 1370.70067490379 83.846 3 -0.6060366578618357 0.17594732343537306 1.0 ['ENSG00000255713|ENST00000545221|OR4D2'] 62591 15098 LLVEHIWKKIM True H1975_Epitope_Rep1 1408.8264633424799 1408.8253699358602 63.329 2 -0.6060726908533124 0.17596036657750203 1.0 ['ENSG00000265203|ENST00000584701|RBP3'] 37564 10430 GYRLRRKWEEK True PC9_epitope_Rep3 1519.83717913855 1519.83553490379 45.057 3 -0.6061740642292586 0.17600227916620503 1.0 ['CSF2RB|p.E703Dfs*27|1|0.4|ENSG00000100368|chr22:36937917-36937920|GGAC/-|frameshift_variant', 'ENSG00000100368|ENST00000403662|CSF2RB', 'nc|ENSG00000100368|P32927-2|CSF2RB'] 46637 14943 ITTRWRSP True PC9_epitope_Rep3 1015.5563128478299 1015.55520993586 62.611 2 -0.6061832564114172 0.17600227916620503 1.0 ['ENSG00000099326|ENST00000215057|MZF1', 'nc|ENSG00000099326|P28698-2|MZF1', 'ENST00000600004.1_1_19:59073441-59074896:-|nuORF'] 74281 9422 NIIKKINVT True NCI_RA007_Epitope_Rep5 1041.65462990677 1041.6535299358602 42.88 2 -0.6062137938341501 0.17606280269697067 1.0 ['ENSG00000165935|ENST00000535986|SMCO2'] 34580 11415 GQGEEVEKLVK True PC9_epitope_Rep2 1214.65066672514 1214.6495699358602 49.23 2 -0.6062236141913379 0.17609167022775113 1.0 ['ENSG00000131242|ENST00000621161|RAB11FIP4'] 135789 6647 YENFRLWQHYK True NCI_RA007_Epitope_Rep1 1582.76809651922 1582.76589987172 29.868 4 -0.6062680885175173 0.17611406507152805 1.0 ['nc|ENSG00000188152|Q5VZR2-2|NUTM2G', 'nc|ENSG00000188199|A6NNL0-2|NUTM2B', 'nc|ENSG00000184923|Q8IVF1-2|NUTM2A', 'ENSG00000188152|ENST00000372322|NUTM2G', 'ENSG00000130950|ENST00000253262|NUTM2F', 'ENSG00000214562|ENST00000381697|NUTM2D', 'ENSG00000228570|ENST00000429984|NUTM2E', 'ENSG00000188199|ENST00000429828|NUTM2B', 'ENSG00000184923|ENST00000381707|NUTM2A', 'NUTM2G|p.R222Gfs*30|1|0.2|ENSG00000188152|chr9:96932367-96932367|G/-|frameshift_variant', 'NUTM2F|p.P392Lfs*43|1|0.27|ENSG00000130950|chr9:94320401-94320401|G/-|frameshift_variant'] 66541 8733 LSSHHVVHK True NCI_RA007_Epitope_Rep1 1042.5672118846999 1042.5661099358601 37.972 2 -0.6062850432310715 0.17611406507152805 1.0 ['ENSG00000169071|ENST00000375708|ROR2'] 20525 4574 EPWNRSCRRWK True NCI_RA007_Epitope_Rep3 1516.74698423516 1516.74532490379 24.878 3 -0.6062945910784969 0.17611406507152805 1.0 ['ENST00000511799.5_3_5:60095008-60139355:-|nuORF'] 94580 22042 RYIRLRFQRIR True PC9_epitope_Rep6 1575.9586316839097 1575.95698490379 97.718 3 -0.606306972132234 0.17611406507152805 1.0 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.V2037Lfs*29|1|0.2|ENSG00000196569|chr6:129440839-129440839|G/-|frameshift_variant', 'LAMA2|p.R1029Hfs*46|1|0.17|ENSG00000196569|chr6:129300784-129300784|G/-|frameshift_variant', 'LAMA2|p.V425Sfs*27|1|0.09|ENSG00000196569|chr6:129165640-129165640|A/-|frameshift_variant', 'LAMA2|p.E614Gfs*16|1|0.25|ENSG00000196569|chr6:129250170-129250171|AA/-|frameshift_variant'] 4802 14334 ALELLEPIDQK True H1975_Epitope_Rep1 1267.70236794483 1267.7012699358602 60.326 2 -0.6063308193326573 0.17611406507152805 1.0 ['ENSG00000203879|ENST00000447750|GDI1', 'ENST00000465640.1_1_X:153670288-153671016:+|nuORF', 'ENST00000468483.5_1_X:153669954-153671016:+|nuORF', 'ENST00000460984.1_1_X:153670432-153670829:+|nuORF', 'ENST00000491154.1_1_X:153669954-153670603:+|nuORF'] 99240 16855 SLCRISSVP True PC9_epitope_Rep2 960.50625142092 960.50514993586 70.081 2 -0.6063461240319442 0.17611406507152805 1.0 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 15281 10889 EAGVTGIRRW True H1975_Epitope_Rep3 1143.61489035311 1143.61378993586 46.969 2 -0.606390577571975 0.17611406507152805 1.0 ['RC3H2|p.R156Pfs*98|1|0.31|ENSG00000056586|chr9:122890428-122890429|-/G|frameshift_variant'] 49312 9939 KHTKKEEENSM True H1975_Epitope_Rep3 1359.6452640748698 1359.6441699358602 43.262 2 -0.6063928689446177 0.17611406507152805 1.0 ['ENSG00000177409|ENST00000318238|SAMD9L', 'nc|ENSG00000177409|Q8IVG5-2|SAMD9L'] 1840 11643 AEIEDPPIP True NCI_RA007_Epitope_Rep3 979.4862271689899 979.48512993586 52.919 2 -0.606406174032783 0.17611406507152805 1.0 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant'] 108459 5264 TEELVVNK True NCI_RA007_Epitope_Rep2 930.5022115863 930.50110993586 25.098 2 -0.6064247285911369 0.17612710268542403 1.0 ['ENSG00000124157|ENST00000372769|SEMG2'] 84390 10982 QGEEVFQSL True PC9_epitope_Rep4 1035.48728979815 1035.48618993586 50.017 2 -0.6064604419943966 0.1761401398866981 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 139331 6123 YTDSLFYMDHK True H1975_Epitope_Rep2 1418.6176523447 1418.6165499358601 28.532 2 -0.6065142581357392 0.17614481470932625 1.0 ['ENSG00000254685|ENST00000370898|FPGT', 'nc|ENSG00000254685|O14772|FPGT'] 61932 20754 LLLLSPNPFL True NCI_RA007_Epitope_Rep5 1125.67978202545 1125.6781349037901 86.804 3 -0.6065225233075826 0.17614481470932625 1.0 ['ENST00000602596.1_1_16:67515375-67518232:+|nuORF'] 62559 6997 LLTPSDLDP True NCI_RA007_Epitope_Rep1 969.5018772331299 969.50078993586 31.215 2 -0.6065309028947518 0.17614481470932625 1.0 ['ENSG00000187266|ENST00000222139|EPOR', 'nc|ENSG00000187266|P19235-3|EPOR'] 66569 6878 LSSLKATP True NCI_RA007_Epitope_Rep1 815.47526856247 815.47416993586 30.758 2 -0.6065365168041826 0.17614481470932625 1.0 ['ENST00000273308.8_2_12:56709793-56710018:-|nuORF'] 123665 16258 VINCGDPGIPA True PC9_epitope_Rep5 1054.5117307241799 1054.5106299358602 67.528 2 -0.606602182508806 0.17617088607594936 1.0 ['nc|ENSG00000121904|Q7Z408|CSMD2', 'ENSG00000121904|ENST00000373381|CSMD2'] 62972 11440 LNEISEETTIQ True PC9_epitope_Rep1 1275.61942616651 1275.6183299358602 48.881 2 -0.6066634223146246 0.17617088607594936 1.0 ['ENSG00000164118|ENST00000503780|CEP44'] 42179 8909 IEFWERRVLKI True NCI_RA007_Epitope_Rep2 1487.8612686280696 1487.86016993586 39.281 2 -0.6067153145835436 0.17619974367494184 1.0 ['nc|ENSG00000010379|Q9NSD5-2|SLC6A13', 'ENSG00000010379|ENST00000343164|SLC6A13'] 24446 6233 FAGSASSLH True NCI_RA007_Epitope_Rep2 875.4137309350701 875.41262993586 28.851 2 -0.6067298639249437 0.17621277807664315 1.0 ['ZIC3|p.P329Hfs*79|1|0.45|ENSG00000156925|chrX:137567675-137567675|C/-|frameshift_variant', 'nc|ENSG00000156925|O60481-2|ZIC3', 'ENSG00000156925|ENST00000287538|ZIC3'] 74298 20158 NIITGNFLM True PC9_epitope_Rep4 1021.52665251233 1021.52554993586 85.674 2 -0.6067369323968741 0.17622023574084328 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 16386 8035 EELKVKASP True H1975_Epitope_Rep2 999.5600608155898 999.55896993586 35.856 2 -0.6067655999297927 0.17622023574084328 1.0 ['nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 79139 6911 PGAPPGSQP True PC9_epitope_Rep5 806.3922672145 806.39116993586 31.553 2 -0.6068159677002259 0.17622023574084328 1.0 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 62545 17655 LLTGLALPTL True PC9_epitope_Rep6 1010.6375828603 1010.63648993586 80.549 2 -0.6068796199380952 0.1762937649310994 1.0 ['ENSG00000179921|ENST00000519574|GPBAR1'] 138537 14720 YRLRRKWEEKI True PC9_epitope_Rep1 1575.89977939511 1575.89812490379 61.442 3 -0.6068851548843616 0.1762937649310994 1.0 ['CSF2RB|p.E703Dfs*27|1|0.4|ENSG00000100368|chr22:36937917-36937920|GGAC/-|frameshift_variant', 'ENSG00000100368|ENST00000403662|CSF2RB', 'nc|ENSG00000100368|P32927-2|CSF2RB'] 130128 9275 VTRISNDL True PC9_epitope_Rep3 916.4977949122 916.49668993586 40.619 2 -0.6069524604090287 0.1763040073407268 1.0 ['ENSG00000007047|ENST00000262891|MARK4'] 73408 16051 NESAVIVAP True PC9_epitope_Rep4 898.4759968384599 898.47544496793 69.676 1 -0.606960465647865 0.1763040073407268 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 79587 6907 PGVDSVPLQHT True NCI_RA007_Epitope_Rep3 1148.5825871653199 1148.5814899358602 34.273 2 -0.6070438913575309 0.17631703844328428 1.0 ['CTNND2|p.R471H|2|0.54|ENSG00000169862|chr5:11346588-11346588|C/T|missense_variant'] 27237 10867 FLVKGAQG True PC9_epitope_Rep2 818.4650382319398 818.46394993586 47.117 2 -0.6071171506547882 0.17637752922750788 1.0 ['ALKBH2|p.S56Afs*34|1|0.22|ENSG00000189046|chr12:109092622-109092622|A/-|frameshift_variant', 'ENST00000536720.1_1_12:109530171-109530633:-|nuORF', 'nc|ENSG00000189046|Q6NS38-2|ALKBH2', 'ENSG00000189046|ENST00000429722|ALKBH2'] 62752 7785 LLYYYMFLYFR True NCI_RA007_Epitope_Rep1 1590.79449450786 1590.7928549037902 34.272 3 -0.6071933268540471 0.1764221983167753 1.0 ['ENSG00000196131|ENST00000341702|VN1R2'] 130551 9959 VTYGHMPV True PC9_epitope_Rep1 902.4320238514999 902.43092993586 43.17 2 -0.6072652733862242 0.17646686599275466 1.0 ['ENSG00000196357|ENST00000304116|ZNF565', 'nc|ENSG00000196357|Q8N9K5|ZNF565'] 99013 24511 SKNVRTILIEI True PC9_epitope_Rep4 1284.7765359446 1284.7759749679299 102.77 1 -0.607279261297564 0.17647151873704858 1.0 ['ENST00000231498.7_1_5:37291884-37291974:-|nuORF'] 39116 9535 HLDFFPNGGK True H1975_Epitope_Rep1 1130.55089311422 1130.5497899358602 41.599 2 -0.607287743012488 0.17647151873704858 1.0 ['nc|ENSG00000266200|P54317|PNLIPRP2'] 12435 7001 DKKKPSPPAP True NCI_RA007_Epitope_Rep3 1063.6025943339098 1063.6014899358602 34.648 2 -0.6073212173467296 0.17647151873704858 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 92097 7283 RPWLGLDHFNK True H1975_Epitope_Rep1 1381.7255034312495 1381.72384490379 33.025 3 -0.6073218666744729 0.17647151873704858 1.0 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 41408 9512 IARSIARAL True PC9_epitope_Rep6 969.6083484206898 969.60724993586 46.848 2 -0.6073374538041082 0.176484545540827 1.0 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'ENST00000590558.5_1_19:5692045-5712033:-|nuORF', 'nc|ENSG00000196365|P36776-3|LONP1', 'ENST00000587552.5_1_19:5696605-5708411:-|nuORF'] 140387 2891 YYESTRKENL True PC9_epitope_Rep1 1301.6251802532897 1301.62354490379 15.756 3 -0.607369988005656 0.1765078059505544 1.0 ['ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.H1181Qfs*2|1|0.26|ENSG00000143631|chr1:152311343-152311344|-/T|frameshift_variant'] 101284 9242 SLWTLPDVL True NCI_RA007_Epitope_Rep2 1042.5698972233 1042.5688099358601 40.56 2 -0.6073897070365403 0.1765078059505544 1.0 ['ENSG00000103404|ENST00000219689|USP31'] 127752 26137 VRKERKRHKT True PC9_epitope_Rep3 1336.81638412432 1336.8152899358602 106.52 2 -0.6073980541507246 0.1765078059505544 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 122740 21664 VGVDEEIVYAK True NCI_RA007_Epitope_Rep2 1220.6288686513997 1220.6277699358602 89.748 2 -0.607425436947772 0.1765524659137642 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.T612Dfs*15|1|0.34|ENSG00000092201|chr14:21361174-21361175|-/T|frameshift_variant', 'ENST00000556217.5_1_14:21837875-21852161:-|nuORF'] 9093 17460 AVLDRNVAI True PC9_epitope_Rep1 969.5607295219299 969.55962993586 71.957 2 -0.607497482043984 0.17659712446419815 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 112666 3720 TPFQGQGHGA True PC9_epitope_Rep4 998.4569927293797 998.45588993586 20.447 2 -0.6075426729755441 0.17662317121391855 1.0 ['ENST00000457761.6_1_2:172821936-172844354:+|nuORF', 'nc|ENSG00000128708|O14929-2|HAT1', 'ENSG00000128708|ENST00000264108|HAT1'] 78326 4054 PASRWGSRRRR True H1975_Epitope_Rep2 1383.7708309142297 1383.7691849037901 20.678 3 -0.6075785993248219 0.17662317121391855 1.0 ['ENST00000408011.7_1_18:24128932-24129277:-|nuORF'] 56085 9930 LDLGWPLTF True PC9_epitope_Rep1 1060.5593325396 1060.55822993586 43.058 2 -0.6076511621053917 0.17664362871467207 1.0 ['ENSG00000180921|ENST00000388913|FAM83H'] 18140 7763 EINDYPQP True H1975_Epitope_Rep3 974.4345259493 974.43342993586 34.845 2 -0.6076600344910978 0.17664362871467207 1.0 ['ENST00000371130.7_2_X:123870848-123870977:-|nuORF'] 51889 27211 KKRKRKKREKL True PC9_epitope_Rep5 1497.0103329035994 1497.00868490379 111.46 3 -0.6076855121814365 0.17664362871467207 1.0 ['ENSG00000065183|ENST00000349139|WDR3'] 77895 7185 PAGVQELT True PC9_epitope_Rep4 813.42323298961 813.42212993586 34.938 2 -0.6077047383226959 0.17664362871467207 1.0 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENST00000310331.2_1_5:139927339-139928819:+|nuORF'] 128702 9317 VSPALSPVRSP True H1975_Epitope_Rep1 1108.62405805448 1108.62296993586 40.744 2 -0.6077748871497486 0.17665385649444101 1.0 ['ENSG00000187017|ENST00000645284|ESPN', 'nc|ENSG00000187017|B1AK53-2|ESPN', 'ENST00000477679.1_1_1:6511829-6520203:+|nuORF'] 62005 13154 LLLRLRQIC True NCI_RA007_Epitope_Rep5 1126.7008689065399 1126.69976993586 57.275 2 -0.6078075812512953 0.17665385649444101 1.0 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 111946 10190 TLSCSEEGLPG True PC9_epitope_Rep5 1091.48049016555 1091.4793899358601 44.183 2 -0.6078408677161399 0.17666128981244267 1.0 ['ENSG00000160883|ENST00000292432|HK3'] 19515 8027 ELQNHLGLSAP True H1975_Epitope_Rep2 1177.6091362663299 1177.60802993586 35.823 2 -0.6078493028698856 0.17666128981244267 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9'] 49439 8369 KIMNMIKLY True PC9_epitope_Rep4 1152.6399084427599 1152.63826490379 39.649 3 -0.6078494777894498 0.17666128981244267 1.0 ['ENSG00000143368|ENST00000271628|SF3B4'] 39215 3438 HLHHRWVLFEE True PC9_epitope_Rep1 1501.7578661886903 1501.7562149037901 18.151 3 -0.6079306348757707 0.17670034947894428 1.0 ['nc|ENSG00000113073|Q96Q91|SLC4A9'] 112867 12687 TPNSYLTQAP True PC9_epitope_Rep2 1090.5294889633 1090.52838993586 54.108 2 -0.6079658163379301 0.17670034947894428 1.0 ['nc|ENSG00000258537|P0C7T7|FRMD6-AS1'] 80788 11574 PLSRSAEL True PC9_epitope_Rep5 871.4763311916299 871.4752299358599 49.514 2 -0.6079794459245147 0.17670034947894428 1.0 ['ENST00000498171.5_1_22:20077477-20097628:+|nuORF', 'nc|ENSG00000128191|Q8WYQ5-3|DGCR8', 'ENSG00000128191|ENST00000351989|DGCR8', 'ENST00000495826.5_1_22:20074657-20094820:+|nuORF'] 30887 16385 GARRFRQWTFT True PC9_epitope_Rep1 1424.7425504777198 1424.7414499358601 67.848 2 -0.6080297168977308 0.17671336854422973 1.0 ['ENST00000389416.8_1_7:157997932-158380300:-|nuORF'] 122065 10348 VGRAGWGPT True PC9_epitope_Rep4 899.4613498338299 899.46024993586 47.499 2 -0.6081447204435271 0.17674403896021756 1.0 ['ENST00000497675.2_1_1:2124722-2124944:-|nuORF'] 85334 8534 QLATETQALA True H1975_Epitope_Rep3 1044.54513902744 1044.5440499358601 37.813 2 -0.608164262541417 0.17674403896021756 1.0 ['ENSG00000163060|ENST00000295201|TEKT4', 'ENST00000468063.1_1_2:95537336-95538738:+|nuORF'] 117473 9301 VAEANRLRDS True PC9_epitope_Rep4 1129.58398414765 1129.58233490379 43.384 3 -0.6081725407451006 0.17674403896021756 1.0 ['ENST00000443959.1_1_1:151254484-151254514:+|nuORF'] 2829 12299 AEVIVDWRP True NCI_RA007_Epitope_Rep4 1083.57129420563 1083.57018993586 54.305 2 -0.608186942001474 0.17674403896021756 1.0 ['ENSG00000121749|ENST00000485960|TBC1D15', 'nc|ENSG00000121749|Q8TC07-3|TBC1D15', 'nc|ENSG00000121749|Q8TC07|TBC1D15', 'ENST00000546932.5_1_12:72265915-72278641:+|nuORF'] 66734 4279 LSTQVDPMMRL True NCI_RA007_Epitope_Rep3 1289.64717865117 1289.6455349037901 23.545 3 -0.6082008480549013 0.17674403896021756 1.0 ['nc|ENSG00000104970|Q9H7L2|KIR3DX1'] 30242 5203 GAAEPQQLP True NCI_RA007_Epitope_Rep3 909.45559574705 909.45448993586 27.464 2 -0.608201010143284 0.17674403896021756 1.0 ['ENST00000417456.1_1_1:35441975-35442986:-|nuORF'] 67848 21628 LTIWGRDRNGI True PC9_epitope_Rep1 1299.7047679866698 1299.70366993586 88.018 2 -0.6082672479049928 0.17675705589374655 1.0 ['ENST00000292174.4_1_11:118767763-118768351:+|nuORF'] 10800 16056 DAEERCEQLIK True PC9_epitope_Rep6 1332.6343650379997 1332.63271490379 74.082 3 -0.6083165190666245 0.17677653940399968 1.0 ['MYH8|p.K1812Rfs*39|1|0.41|ENSG00000133020|chr17:10392861-10392861|C/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8'] 124814 25531 VLLIKNYLRKK True NCI_RA007_Epitope_Rep2 1386.9074905444998 1386.90583490379 107.87 3 -0.60837298192802 0.17677653940399968 1.0 ['ENST00000265069.12_1_5:32354674-32354827:-|nuORF'] 115648 17117 TVKDNSLL True PC9_epitope_Rep2 888.4916469026 888.49054993586 71.089 2 -0.6084430990692992 0.17677653940399968 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4'] 68554 8203 LTWKRWRRCWE True NCI_RA007_Epitope_Rep2 1618.8303199362997 1618.82866490379 36.544 3 -0.6085041408793602 0.17677653940399968 1.0 ['ENST00000415950.4_2_19:35528037-35528250:+|nuORF'] 109354 17770 TGIHTPSLAL True PC9_epitope_Rep5 1008.5603951687599 1008.55928993586 73.37 2 -0.6085084367156418 0.17677653940399968 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|299|2|anti-sense'] 67710 6559 LTGGLNKC True PC9_epitope_Rep2 804.41637378736 804.41526993586 30.641 2 -0.6085315861330873 0.17677653940399968 1.0 ['ENST00000406202.2_1_6:157297523-157298164:+|nuORF'] 85450 4584 QLFTTELGRWS True NCI_RA007_Epitope_Rep2 1336.67755017932 1336.67590490379 22.456 3 -0.6085326760762789 0.17677653940399968 1.0 ['ENST00000491583.1_1_3:75475229-75475748:-|nuORF'] 17928 11967 EIEGGRRWTEL True H1975_Epitope_Rep3 1344.6786128084798 1344.6775099358601 51.189 2 -0.6085455989368045 0.17677653940399968 1.0 ['nc|ENSG00000184613|Q99435-3|NELL2'] 62484 21058 LLSPGSVLVL True PC9_epitope_Rep2 996.62193279616 996.62138496793 86.454 1 -0.6085470345921694 0.17677653940399968 1.0 ['ENST00000498749.1_1_2:73114531-73115553:+|nuORF', 'ENSG00000116096|ENST00000234454|SPR'] 73682 6224 NGPNTSLAS True PC9_epitope_Rep5 859.40356017419 859.40246993586 28.92 2 -0.6085673418249284 0.17677653940399968 1.0 ['ENSG00000129933|ENST00000262815|MAU2', 'nc|ENSG00000129933|Q9Y6X3-3|MAU2', 'nc|ENSG00000129933|Q9Y6X3-2|MAU2', 'ENST00000587709.5_1_19:19459550-19466588:+|nuORF', 'ENST00000499453.2_1_19:19464952-19466588:+|nuORF', 'ENST00000262816.11_1_19:19463093-19466588:+|nuORF'] 13448 8786 DNVGFNVK True PC9_epitope_Rep2 891.44503106335 891.44392993586 39.149 2 -0.6086533923547812 0.17679977236080813 1.0 ['ENSG00000156508|ENST00000309268|EEF1A1', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion'] 33021 14901 GIYPKYKSL True PC9_epitope_Rep5 1067.6015317047502 1067.6004299358601 62.32 2 -0.6086785435341395 0.17679977236080813 1.0 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|96|3|sense'] 34314 9434 GPQFLGGA True H1975_Epitope_Rep1 745.3758888743698 745.37534496793 41.203 1 -0.6087044778205815 0.17679977236080813 1.0 ['ENST00000328554.8_1_22:19839984-19842309:-|nuORF'] 113560 8411 TQYLHITEAEE True H1975_Epitope_Rep3 1332.61976051968 1332.61866993586 37.337 2 -0.6087456103070208 0.17680999051533355 1.0 ['nc|ENSG00000066827|Q9P243-4|ZFAT', 'nc|ENSG00000066827|Q9P243-2|ZFAT', 'ENSG00000066827|ENST00000377838|ZFAT', 'ENST00000523243.5_1_8:135490727-135577256:-|nuORF'] 1020 7609 AEAEQEKDQLR True NCI_RA007_Epitope_Rep1 1315.6368075661499 1315.6351649037902 33.589 3 -0.6087651437269702 0.17680999051533355 1.0 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 49261 11380 KHCFRRREHK True H1975_Epitope_Rep1 1395.7418392850698 1395.74074993586 48.752 2 -0.6088198800191557 0.17682020802377416 1.0 ['ENST00000266880.11_1_12:133417602-133417977:-|nuORF'] 36992 12363 GVRRSFRK True NCI_RA007_Epitope_Rep3 1004.5991807193199 1004.59808993586 55.824 2 -0.6088234338610693 0.17682020802377416 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 57422 19703 LEIIHFNNP True PC9_epitope_Rep1 1095.5712942056302 1095.57018993586 80.613 2 -0.6088708544625283 0.1768592428673042 1.0 ['ENSG00000123594|ENST00000380622|ATXN3L'] 85098 20313 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 84.178 3 -0.6088814657231169 0.1768592428673042 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 87150 19840 QSIPSTVTV True PC9_epitope_Rep1 930.5022115863001 930.5016649679301 81.13 1 -0.6088933644921202 0.1768592428673042 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 6919 12955 AQLEKEVP True PC9_epitope_Rep6 912.4916469025999 912.49054993586 61.383 2 -0.6089201618736334 0.17690386621566087 1.0 ['ENSG00000104142|ENST00000220509|VPS18'] 127785 975 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 5.4198 3 -0.6089739492001286 0.1769484881533817 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 58786 20081 LFPASQYYNL True PC9_epitope_Rep6 1214.5971746003 1214.5960699358602 89.917 2 -0.609045575225728 0.17699031121086156 1.0 ['ENST00000498648.5_1_2:202339356-202340375:+|nuORF'] 2546 3693 AEREELRNL True H1975_Epitope_Rep1 1128.58873517492 1128.5870849037901 18.681 3 -0.6090845089533428 0.17699031121086156 1.0 ['ENST00000529747.5_1_8:144917890-144921694:-|nuORF', 'ENSG00000185189|ENST00000442628|NRBP2'] 121730 8224 VGLRHEKYF True PC9_epitope_Rep5 1147.61382772395 1147.61218490379 36.574 3 -0.6091127982326439 0.17701912438754544 1.0 ['MRC1|p.P559H|1|0.08|ENSG00000260314|chr10:17863575-17863575|C/A|missense_variant'] 7891 9406 ATAQPPAPL True PC9_epitope_Rep4 864.4705175351999 864.46942993586 43.789 2 -0.609160847884309 0.17702653580516176 1.0 ['ENSG00000221926|ENST00000649191|TRIM16'] 99687 11124 SLGEHYNSV True PC9_epitope_Rep4 1004.45632402304 1004.45522993586 50.565 2 -0.609169826861432 0.17702653580516176 1.0 ['ENSG00000189401|ENST00000338352|OTUD6A'] 17047 14018 EGNSFGFV True NCI_RA007_Epitope_Rep1 855.3762827971899 855.37518993586 58.553 2 -0.6092213277277775 0.17702653580516176 1.0 ['ENST00000422481.5_1_3:14565113-14565278:-|nuORF', 'ENST00000413414.1_1_3:14565113-14581815:-|nuORF', 'nc|ENSG00000144596|Q9C0E4-2|GRIP2', 'ENSG00000144596|ENST00000621039|GRIP2'] 111915 20408 TLRSSSLSLIL True PC9_epitope_Rep1 1188.70778767844 1188.7061549037899 83.313 3 -0.609240023972033 0.17703954230805702 1.0 ['ENST00000475242.5_1_20:43991907-44037103:+|nuORF'] 82744 7135 PVQDTPVA True NCI_RA007_Epitope_Rep3 825.4232329896099 825.4226849679301 35.186 1 -0.6092962084877521 0.1770497503002718 1.0 ['ENSG00000186063|ENST00000340020|AIDA', 'nc|ENSG00000186063|Q96BJ3-2|AIDA', 'ENST00000514881.1_1_4:159199390-159199825:+|nuORF', 'ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 93058 20012 RRRKKRHPQR True NCI_RA007_Epitope_Rep4 1416.8762990422797 1416.87520993586 86.544 2 -0.6092975284298014 0.1770497503002718 1.0 ['ENST00000338745.10_3_3:18466531-18466693:-|nuORF', 'ENST00000450898.1_1_3:18465198-18466693:-|nuORF'] 99747 4840 SLGKKDKE True PC9_epitope_Rep6 903.5025459394699 903.50144993586 26.124 2 -0.6093485471602414 0.17705995764720756 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'ENST00000342835.8_1_14:65216026-65230503:-|nuORF'] 16000 9513 EEACRTRSQKR True NCI_RA007_Epitope_Rep2 1362.6786298918198 1362.67752993586 41.617 2 -0.6093780533056816 0.17705995764720756 1.0 ['nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 19800 12783 ELTKKHWDL True PC9_epitope_Rep3 1168.62405805448 1168.62296993586 54.192 2 -0.6094506535776777 0.17708876562524692 1.0 ['ENSG00000214946|ENST00000437605|TBC1D26'] 114581 16954 TSLAPPLAPA True PC9_epitope_Rep1 936.5280324113199 936.52692993586 70.037 2 -0.6094938563910625 0.17709057581695214 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 23497 8530 EWDFFRQIFMT True NCI_RA007_Epitope_Rep3 1518.6965713717395 1518.69546993586 40.624 2 -0.6094994366737322 0.17709057581695214 1.0 ['ENST00000395044.7_1_5:133307956-133308070:-|nuORF'] 46651 12877 ITVFVTSNP True H1975_Epitope_Rep2 976.52294703088 976.52184993586 54.643 2 -0.6095391319706815 0.17709057581695214 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 38314 24354 HFRRGRRRSLA True PC9_epitope_Rep5 1410.8181154598199 1410.8170099358601 98.71 2 -0.6095467535578841 0.17709057581695214 1.0 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 58658 5103 LFHFLDEWLYK True NCI_RA007_Epitope_Rep1 1509.7656369077301 1509.76399490379 23.936 3 -0.6095683578675614 0.17709057581695214 1.0 ['ENST00000473294.6_1_1:33098913-33099651:-|nuORF', 'ENST00000483138.5_1_1:33093465-33116130:-|nuORF', 'nc|ENSG00000176261|Q8IWT0-2|ZBTB8OS', 'ENSG00000176261|ENST00000468695|ZBTB8OS'] 124935 9398 VLLVSPELQA True NCI_RA007_Epitope_Rep2 1067.62266107215 1067.6215699358602 41.165 2 -0.6095763895719375 0.1771035790471676 1.0 ['ENSG00000140284|ENST00000267842|SLC27A2', 'nc|ENSG00000140284|O14975-2|SLC27A2'] 122552 6670 VGTAQGHIF True PC9_epitope_Rep1 928.4766655447999 928.47556993586 30.46 2 -0.6095813850147694 0.17711658186644755 1.0 ['ENSG00000104142|ENST00000220509|VPS18'] 38061 9278 HELRHRAQRVP True H1975_Epitope_Rep2 1397.7752475883299 1397.7741499358601 40.644 2 -0.609600743178187 0.17712958427481157 1.0 ['ENST00000293780.4_1_17:4802527-4804189:-|nuORF'] 68324 16058 LTRWRNSL True PC9_epitope_Rep1 1044.58286194884 1044.5817699358602 66.581 2 -0.6096440084127104 0.1771425862722791 1.0 ['CON__REFSEQ:XP_001252647', 'CON__Q9TTE1', 'CON__A2I7N0', 'CON__A2I7N1'] 62071 16199 LLMYEEWDAF True NCI_RA007_Epitope_Rep5 1315.5794759308299 1315.57836993586 69.053 2 -0.6096509969104091 0.17715558785886962 1.0 ['ENST00000460138.5_1_6:7882234-7882414:-|nuORF'] 46704 8084 ITYGNECHLC-[Carbamidomethyl] True H1975_Epitope_Rep2 1208.4954293164699 1208.4943299358602 36.042 2 -0.6097569446800088 0.17718158979949755 1.0 ['ENSG00000145879|ENST00000274565|SPINK7'] 57090 16285 LEELKKQQEKE True NCI_RA007_Epitope_Rep2 1400.7511090423998 1400.7500099358601 68.073 2 -0.6097779755801261 0.17718158979949755 1.0 ['nc|ENSG00000135315|Q5TB80-2|CEP162', 'ENSG00000135315|ENST00000403245|CEP162'] 92878 25025 RRMKKKRVVLR True H1975_Epitope_Rep3 1468.9612745361999 1468.9601699358602 104.09 2 -0.6099330696938103 0.1772577892940656 1.0 ['ENSG00000170178|ENST00000406506|HOXD12'] 28017 11747 FQYHRQLYHKC True NCI_RA007_Epitope_Rep2 1521.7299371886897 1521.72829490379 50.29 3 -0.609980676145005 0.17726518682360376 1.0 ['ENSG00000131187|ENST00000253496|F12'] 58320 11478 LETQPPWLP True NCI_RA007_Epitope_Rep3 1079.56514619603 1079.56404993586 52.266 2 -0.6099808364628723 0.17726518682360376 1.0 ['CASZ1|p.I804Yfs*73|1|0.28|ENSG00000130940|chr1:10653648-10653648|G/-|frameshift_variant'] 92877 24936 RRMKKKRVVLR True H1975_Epitope_Rep3 1468.9612745361999 1468.9601699358602 103.73 2 -0.6100084131441166 0.17726518682360376 1.0 ['ENSG00000170178|ENST00000406506|HOXD12'] 128480 20873 VSFDVFNCQF True PC9_epitope_Rep2 1204.5222954078797 1204.52118993586 85.731 2 -0.6100789124769999 0.17729118283646933 1.0 ['ENST00000431461.1_1_6:110522811-110530492:+|nuORF'] 73402 17143 NESAVIVAP True PC9_epitope_Rep1 898.4759968384599 898.47544496793 70.763 1 -0.6100885110689678 0.17729118283646933 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 79867 15008 PIIWPQWCKEL True PC9_epitope_Rep5 1411.7322286044698 1411.73059490379 62.731 3 -0.6101961823433253 0.17735157508926033 1.0 ['ENST00000367139.7_1_1:205744106-205744529:-|nuORF', 'ENST00000414729.1_1_1:205744259-205744529:-|nuORF', 'ENST00000468887.1_1_1:205739472-205744529:-|nuORF'] 33635 12380 GLNGTKPVP True PC9_epitope_Rep1 881.4970666362099 881.49596993586 52.479 2 -0.6102419595018588 0.17736176935229067 1.0 ['ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1', 'ENST00000555607.1_1_14:45431624-45475488:+|nuORF', 'nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1'] 134028 7141 WPWRWREWRPW True H1975_Epitope_Rep2 1739.8585832894696 1739.85694490379 32.401 3 -0.6103058044224295 0.17736176935229067 1.0 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF'] 10993 9453 DDEDDDDI True H1975_Epitope_Rep3 950.29887989178 950.29778993586 41.365 2 -0.6103759531823668 0.17743795516658506 1.0 ['ENSG00000213047|ENST00000620048|DENND1B', 'DENND1B|p.E705Kfs*3|1|0.3|ENSG00000213047|chr1:197510675-197510675|C/-|frameshift_variant'] 109248 12334 TFWYWNYNYY True H1975_Epitope_Rep2 1518.6244519772997 1518.62334993586 52.527 2 -0.6104691655854424 0.17746394325703363 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 122063 14657 VGRAGPRP True NCI_RA007_Epitope_Rep3 808.4667695674399 808.46566993586 65.028 2 -0.6104710905494255 0.17746394325703363 1.0 ['ENSG00000112164|ENST00000373256|GLP1R'] 42114 16173 IEENRYLF True PC9_epitope_Rep4 1082.53965972418 1082.53856993586 70.153 2 -0.6105090272875635 0.1774769366864653 1.0 ['ENST00000572732.1_1_16:11785059-11785929:-|nuORF', 'ENSG00000153066|ENST00000283033|TXNDC11', 'nc|ENSG00000153066|Q6PKC3|TXNDC11'] 12574 9334 DLDNNRPLE True NCI_RA007_Epitope_Rep1 1084.5149015283198 1084.51380993586 40.301 2 -0.610559090855733 0.17748712602280983 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1', 'ENST00000497509.1_1_22:46926386-46930076:-|nuORF'] 111775 20812 TLQQSPPLPV True PC9_epitope_Rep1 1078.6022599807397 1078.60116993586 84.881 2 -0.6105690654492353 0.17748712602280983 1.0 ['ENST00000414141.1_1_2:70351197-70351452:-|nuORF'] 133803 22642 WLRRLILELLK True PC9_epitope_Rep5 1451.9340396455098 1451.93239490379 92.093 3 -0.6106072146333369 0.17751311050736085 1.0 ['MTOR|p.S1288I|1|0.12|ENSG00000198793|chr1:11204642-11204642|C/A|missense_variant'] 61517 6653 LLGAGAEY True H1975_Epitope_Rep2 792.40176926904 792.40122496793 30.498 1 -0.6106592920151835 0.17751311050736085 1.0 ['ENST00000487292.1_3_15:42134104-42135875:+|nuORF', 'ENST00000491746.5_1_15:42134104-42137535:+|nuORF'] 125472 10957 VLVCSGCHCNY True PC9_epitope_Rep1 1196.47767079792 1196.4765699358602 47.034 2 -0.6106924674242212 0.17753628911247651 1.0 ['ENST00000571914.1_1_17:79605115-79605256:+|nuORF'] 39229 8508 HLKKHVVP True NCI_RA007_Epitope_Rep3 956.5919700805599 956.59086993586 40.54 2 -0.6107123324716709 0.17753628911247651 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'nc|ENSG00000173821|Q63HN8-5|RNF213'] 35779 12194 GTVLDQVP True PC9_epitope_Rep3 827.4388830537499 827.43778993586 51.936 2 -0.6107173699768167 0.17753628911247651 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'ENSG00000106723|ENST00000375859|SPIN1', 'ENSG00000186787|ENST00000434397|SPIN2B', 'ENSG00000147059|ENST00000374906|SPIN2A'] 56841 10568 LEDECFELK True NCI_RA007_Epitope_Rep1 1124.5059766374 1124.5048699358601 45.091 2 -0.6107764900332328 0.1775408670931059 1.0 ['MYH15|p.H1065Pfs*7|1|0.16|ENSG00000144821|chr3:108437641-108437641|T/-|frameshift_variant', 'ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF'] 98487 9570 SILAMHAQDP True H1975_Epitope_Rep1 1081.52262976105 1081.5215299358601 41.734 2 -0.6108002077704175 0.1775408670931059 1.0 ['nc|ENSG00000198728|Q86U70-3|LDB1', 'nc|ENSG00000198728|Q86U70-2|LDB1', 'ENSG00000198728|ENST00000673968|LDB1', 'ENST00000508918.5_1_4:16504706-16675844:-|nuORF', 'nc|ENSG00000169744|O43679-2|LDB2', 'nc|ENSG00000169744|O43679-3|LDB2', 'ENSG00000169744|ENST00000304523|LDB2'] 91527 14787 RPADVIFAT True PC9_epitope_Rep1 988.5341804209199 988.5336349679301 61.697 1 -0.6108012568388087 0.1775408670931059 1.0 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 67527 15012 LTELSTYCGW True PC9_epitope_Rep1 1171.52196105471 1171.5208699358602 62.563 2 -0.6108020195599785 0.1775408670931059 1.0 ['ENST00000344111.3_1_7:1007687-1008335:-|nuORF'] 58969 5222 LFYYRLWDLYK True NCI_RA007_Epitope_Rep1 1578.82348613702 1578.8218349037902 24.394 3 -0.6108782630154989 0.17758544443742497 1.0 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2', 'ENST00000525110.1_1_11:45889192-45889438:+|nuORF'] 118928 8259 VEERERKERRE True PC9_epitope_Rep4 1514.7913511449399 1514.78971490379 39.229 3 -0.610937579167849 0.17759001895135818 1.0 ['nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1', 'RIMS1|p.P777Lfs*6|1|0.46|ENSG00000079841|chr6:72250417-72250417|C/-|frameshift_variant', 'nc|ENSG00000079841|Q86UR5-2|RIMS1'] 138716 23909 YRWPMRYDQWW True NCI_RA007_Epitope_Rep2 1685.7561519365297 1685.7550499358601 100.37 2 -0.6109441193653661 0.17759001895135818 1.0 ['nc|ENSG00000126107|Q5T447-2|HECTD3', 'ENSG00000126107|ENST00000372172|HECTD3'] 132065 14444 VYIHVESKL True PC9_epitope_Rep2 1086.60734536118 1086.6062499358602 60.827 2 -0.6109683472197477 0.17759001895135818 1.0 ['ENST00000323387.5_10:47416870-47420453:+|nuORF'] 127296 5828 VQLPAGVK True PC9_epitope_Rep1 810.49633836022 810.49524993586 27.232 2 -0.6109853857501135 0.17759001895135818 1.0 ['ENSG00000001630|ENST00000003100|CYP51A1'] 43211 13449 IGVFVRRAI True PC9_epitope_Rep3 1029.6447339294098 1029.6436299358602 56.777 2 -0.6110709896975459 0.17765038454857 1.0 ['ENST00000431167.1_1_21:36972032-36972302:-|nuORF'] 77691 7498 PAAARPLPAA True PC9_epitope_Rep5 933.5396001545298 933.53850993586 33.791 2 -0.6111905755177003 0.17770794182208677 1.0 ['ENST00000555638.5_1_14:67940311-67953837:-|nuORF'] 113948 3055 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 16.54 3 -0.6112044339836229 0.17770794182208677 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 56076 19370 LDLEWRSGL True PC9_epitope_Rep2 1087.56620882519 1087.5651099358602 79.883 2 -0.6112319907207997 0.17771812080536914 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3'] 123729 7890 VIQSTLDGLLC-[Carbamidomethyl] True H1975_Epitope_Rep1 1217.6325744122798 1217.6314699358602 35.301 2 -0.6112520433097747 0.17771812080536914 1.0 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 113947 2980 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 16.196 3 -0.6112764288361378 0.17774689700912738 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 32945 11492 GISDEYHVI True PC9_epitope_Rep4 1031.4923751785898 1031.4912699358601 51.965 2 -0.6113468558310109 0.17779040942320748 1.0 ['nc|ENSG00000105607|Q92947-2|GCDH', 'ENSG00000105607|ENST00000222214|GCDH', 'ENST00000591043.1_1_19:13008418-13010352:+|nuORF', 'ENST00000590530.5_1_19:13002704-13010352:+|nuORF'] 128910 13175 VSTGTLVP True PC9_epitope_Rep1 772.4330693973199 772.43196993586 55.541 2 -0.6114113332865879 0.17779040942320748 1.0 ['ENST00000562590.5_1_16:28922190-28936514:-|nuORF', 'ENSG00000177548|ENST00000358201|RABEP2', 'nc|ENSG00000177548|Q9H5N1-2|RABEP2'] 115665 11923 TVKQLHEAIV True H1975_Epitope_Rep3 1136.65535818276 1136.6542699358602 51.014 2 -0.6114228121022014 0.17779040942320748 1.0 ['ENSG00000138095|ENST00000260665|LRPPRC'] 113944 2778 TRKDKEESKKK True PC9_epitope_Rep1 1375.7783268497494 1375.77667490379 15.179 3 -0.6114892740832528 0.17779040942320748 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 16133 6112 EEEFFDAP True H1975_Epitope_Rep2 982.3919924309798 982.39088993586 28.489 2 -0.6114934905710514 0.17779040942320748 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 111904 7799 TLRRRIEPWEF True NCI_RA007_Epitope_Rep3 1501.8153810648098 1501.81372490379 37.8 3 -0.6115063022990458 0.17779040942320748 1.0 ['APOBEC1|p.Q126Kfs*14|2|0.41|ENSG00000111701|chr12:7652504-7652504|G/-|frameshift_variant', 'ENSG00000111701|ENST00000229304|APOBEC1'] 72195 14684 MRRYEEDMYWR True H1975_Epitope_Rep1 1633.7129667952097 1633.71186993586 61.697 2 -0.611518058363763 0.17779040942320748 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 122301 23565 VGRTRFLRA True PC9_epitope_Rep1 1074.6410455312998 1074.6399499358602 95.433 2 -0.6115561162114567 0.17780058419515277 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 85102 20838 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 86.282 3 -0.6115640679900457 0.17780058419515277 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 74340 14386 NIPRDTVNL True PC9_epitope_Rep2 1040.56145779792 1040.56036993586 60.597 2 -0.6116530044653267 0.17781356574460022 1.0 ['ENSG00000162998|ENST00000295113|FRZB'] 78336 16400 PASWYETV True PC9_epitope_Rep5 951.4337976733099 951.43270993586 68.081 2 -0.6117783130116138 0.17788408405563713 1.0 ['ENST00000467600.5_1_2:114386183-114392789:+|nuORF'] 93073 23787 RRRKRQGH True PC9_epitope_Rep2 1092.6489248763999 1092.64782993586 96.971 2 -0.6117786721117133 0.17788408405563713 1.0 ['ENST00000580483.5_1_18:10525983-10526091:+|nuORF'] 122516 8115 VGSSQFKTI True PC9_epitope_Rep1 965.51819600361 965.51708993586 36.041 2 -0.611812714332406 0.17788408405563713 1.0 ['ENST00000544662.1_1_12:132414461-132416977:+|nuORF', 'nc|ENSG00000177192|Q9Y606-2|PUS1', 'ENSG00000177192|ENST00000376649|PUS1'] 60484 7576 LIMDRAADP True NCI_RA007_Epitope_Rep1 1000.5011660404798 1000.50006993586 33.462 2 -0.6118399933557322 0.17789425490598507 1.0 ['nc|ENSG00000076944|Q15833-2|STXBP2', 'ENSG00000076944|ENST00000221283|STXBP2', 'nc|ENSG00000076944|Q15833-3|STXBP2', 'ENST00000594221.5_1_19:7706941-7707474:+|nuORF'] 11409 13660 DFLIRHHGPK True H1975_Epitope_Rep3 1218.6621748987002 1218.66106993586 57.834 2 -0.6118589977829634 0.17789425490598507 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 98523 15146 SILIQHHK True PC9_epitope_Rep1 974.5661492555402 974.56504993586 63.081 2 -0.6119839595823389 0.17792302106027597 1.0 ['ENSG00000133302|ENST00000265140|SLF1'] 46623 9693 ITTHYTIYP True PC9_epitope_Rep4 1107.5600608155898 1107.5589699358602 44.918 2 -0.6120094078913313 0.17793319019954534 1.0 ['ENSG00000171503|ENST00000511912|ETFDH', 'ENST00000436096.2_1_4:159593593-159602751:+|nuORF'] 129857 22771 VTLLKEGTL True PC9_epitope_Rep1 972.58554728744 972.58444993586 92.397 2 -0.6120188545004827 0.17793319019954534 1.0 ['IGSF9B|p.W173L|1|0.26|ENSG00000080854|chr11:133937853-133937853|C/A|missense_variant'] 72224 11750 MRWRWWQRLLP True H1975_Epitope_Rep3 1626.8717908254598 1626.8706899358601 50.34 2 -0.61204900385527 0.17794616781119268 1.0 ['ENSG00000176410|ENST00000395176|DNAJC30'] 38296 18950 HFLNNLKGEN True PC9_epitope_Rep4 1184.5938205553598 1184.59272993586 80.979 2 -0.6120560390096633 0.17795633573807756 1.0 ['ENSG00000204291|ENST00000375001|COL15A1'] 17142 6349 EGVTEAKHP True NCI_RA007_Epitope_Rep3 966.4770594676199 966.47596993586 31.978 2 -0.6120918184673504 0.17795633573807756 1.0 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 115534 15779 TVGVPSLSP True PC9_epitope_Rep1 855.4701831820299 855.46908993586 65.513 2 -0.6122192079598586 0.17801666982383027 1.0 ['ENST00000429408.5_1_7:79088312-79088983:+|nuORF'] 21666 16703 ERVKEDLEKV True PC9_epitope_Rep5 1243.67721582615 1243.67610993586 69.253 2 -0.6122695733096052 0.1780296452982683 1.0 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant'] 67738 9760 LTGPYSVMPS True H1975_Epitope_Rep3 1050.50558271458 1050.5044899358602 42.565 2 -0.612413154962439 0.1780741910023678 1.0 ['nc|ENSG00000078674|Q15154-2|PCM1', 'ENSG00000078674|ENST00000325083|PCM1', 'nc|ENSG00000078674|Q15154-4|PCM1', 'nc|ENSG00000078674|Q15154-5|PCM1'] 38094 4529 HENNNGQAAF True NCI_RA007_Epitope_Rep4 1100.4635346618 1100.4624299358602 23.817 2 -0.6124500542527516 0.17808435408511175 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 111726 13346 TLQALDSAP True PC9_epitope_Rep1 914.4709114580199 914.46980993586 56.195 2 -0.6124723608794849 0.17808435408511175 1.0 ['NRK|p.P418T|1|0.38|ENSG00000123572|chrX:105908893-105908893|C/A|missense_variant'] 105516 5374 SVDGSPVSP True H1975_Epitope_Rep2 843.39741216459 843.39630993586 25.711 2 -0.6125358866473987 0.17811030084919657 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.H598Tfs*38|1|0.13|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant', 'IRS1|p.Q1064Tfs*17|1|0.18|ENSG00000169047|chr2:226795553-226795554|-/C|frameshift_variant'] 82103 9983 PTAEIQLEL True H1975_Epitope_Rep2 1012.5440763982798 1012.54296993586 43.389 2 -0.6125453711501586 0.17811030084919657 1.0 ['ENST00000344773.6_1_2:28561412-28561616:+|nuORF'] 48732 11288 KENYKLLL True NCI_RA007_Epitope_Rep3 1019.6015317047498 1019.60042993586 51.513 2 -0.6125654235678407 0.17813905769079 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|22|1|sense'] 22064 15234 ESSAILIYL True NCI_RA007_Epitope_Rep3 1007.55391280599 1007.55337496793 67.451 1 -0.6127206924254398 0.17814921792382846 1.0 ['nc|ENSG00000133433|P0CG29|GSTT2', 'ENSG00000133433|ENST00000290765|GSTT2B'] 62310 18349 LLQTDELNQ True PC9_epitope_Rep4 1072.540053647 1072.53894993586 78.646 2 -0.6127226525992615 0.17814921792382846 1.0 ['ENSG00000118492|ENST00000397944|ADGB', 'nc|ENSG00000118492|Q8N7X0-2|ADGB'] 61568 8873 LLGNPEFAAP True PC9_epitope_Rep6 1027.53384606775 1027.53274993586 44.069 2 -0.6127794241738508 0.17817234848484848 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN', 'nc|ENSG00000160145|O60229|KALRN', 'ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-3|TRIO'] 66571 21172 LSSLPPVYRI True PC9_epitope_Rep1 1143.66519459047 1143.6640899358601 86.271 2 -0.6127902684416988 0.17817234848484848 1.0 ['ENST00000564648.1_1_16:85839106-85840477:+|nuORF', 'ENST00000568339.5_1_16:85839106-85839475:+|nuORF'] 98469 15299 SIKNKHLI True PC9_epitope_Rep2 951.5865503469499 951.58544993586 64.129 2 -0.6128002166379187 0.17817234848484848 1.0 ['nc|ENSG00000146038|Q9UHG0-2|DCDC2'] 59950 19156 LHLRWTQP True PC9_epitope_Rep1 1049.57704829241 1049.57594993586 78.477 2 -0.6129196930447846 0.17824844936159467 1.0 ['ENST00000268893.10_1_17:56393882-56399727:-|nuORF'] 84034 16203 QEPGTEDEICS True PC9_epitope_Rep1 1206.47104768066 1206.46994993586 67.142 2 -0.61293122547154 0.1782614185158297 1.0 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 19257 15636 ELLKHLIVTP True PC9_epitope_Rep6 1161.71214478289 1161.71050490379 72.347 3 -0.613045208173905 0.178337515584805 1.0 ['C3|p.R999L|1|0.18|ENSG00000125730|chr19:6694589-6694589|C/A|missense_variant'] 79561 8038 PGSVGSDDLK True H1975_Epitope_Rep1 973.47163973401 973.47054993586 35.863 2 -0.6130843036529167 0.17835048292405783 1.0 ['ENST00000446198.5_1_7:131188411-131188615:-|nuORF'] 104530 9348 SSRSSSESSY True H1975_Epitope_Rep2 1075.44179615771 1075.44068993586 40.918 2 -0.6130898482478471 0.17835782031656855 1.0 ['ENSG00000154783|ENST00000285046|FGD5'] 33463 22838 GLGPLLLNL True PC9_epitope_Rep2 908.56950330048 908.56840993586 93.336 2 -0.6130948940499832 0.17835782031656855 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 10741 7537 CWGPSNTCAGP True PC9_epitope_Rep1 1091.41645044035 1091.4153499358601 33.809 2 -0.6131020543491877 0.17835782031656855 1.0 ['ENST00000300209.12_1_12:58174160-58174295:+|nuORF'] 133656 23866 WKRKEDKKRVV True PC9_epitope_Rep1 1470.87831567454 1470.87667490379 96.602 3 -0.6131284638126695 0.17837078651685392 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 123051 17296 VGYRIYDVVL True PC9_epitope_Rep2 1195.6601092100298 1195.65900993586 71.787 2 -0.6131799681280827 0.17837812248504836 1.0 ['ENSG00000128052|ENST00000263923|KDR', 'nc|ENSG00000128052|P35968-2|KDR', 'nc|ENSG00000128052|P35968-3|KDR', 'KDR|p.D433Ifs*11|1|0.41|ENSG00000128052|chr4:55107852-55107852|C/-|frameshift_variant'] 41406 12211 IARLYHDCDP True PC9_epitope_Rep2 1201.5549925184898 1201.55335490379 52.281 3 -0.6131941352337142 0.17837812248504836 1.0 ['ENST00000560933.5_1_22:39487593-39488026:+|nuORF'] 56128 15155 LDLWEFFCRKK True H1975_Epitope_Rep3 1483.7645913619097 1483.7634899358602 63.695 2 -0.6132033068857493 0.17837812248504836 1.0 ['nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-2|PARP11', 'ENST00000476985.5_1_12:3921210-3931106:-|nuORF'] 79627 21018 PHATLVFDVEL True PC9_epitope_Rep1 1239.6499384491499 1239.6488499358602 85.674 2 -0.6132330751452177 0.17839108754655053 1.0 ['ENST00000474726.5_1_20:1352758-1358098:-|nuORF', 'ENSG00000198225|ENST00000370659|FKBP1C', 'ENSG00000088832|ENST00000400137|FKBP1A', 'chr20:1370072-1371120|434|33.56|0.0|21.68|-|ENST00000677335|FKBP1A,FKBP1A'] 130810 4420 VVEYECRPGYR True NCI_RA007_Epitope_Rep2 1369.6448701520499 1369.64323490379 21.826 3 -0.613347906770955 0.1784198317895634 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 52763 6273 KQMTRRFSADE True H1975_Epitope_Rep1 1367.6615828453498 1367.6604899358601 29.196 2 -0.6133811562244362 0.1784327957837599 1.0 ['ENSG00000044446|ENST00000379942|PHKA2', 'ENST00000473739.5_1_X:18912213-18919671:-|nuORF'] 41248 10130 IAEPFYHLP True H1975_Epitope_Rep2 1085.55458151233 1085.5534899358602 43.964 2 -0.6134582680939079 0.17844464429403134 1.0 ['nc|ENSG00000163939|Q86U86-5|PBRM1', 'nc|ENSG00000163939|Q86U86-7|PBRM1', 'nc|ENSG00000163939|Q86U86-3|PBRM1', 'nc|ENSG00000163939|Q86U86-9|PBRM1', 'nc|ENSG00000163939|Q86U86-2|PBRM1', 'nc|ENSG00000163939|Q86U86-8|PBRM1', 'nc|ENSG00000163939|Q86U86|PBRM1', 'ENSG00000163939|ENST00000707071|PBRM1', 'nc|ENSG00000163939|Q86U86-4|PBRM1', 'nc|ENSG00000163939|Q86U86-6|PBRM1', 'PBRM1|p.W992Mfs*12|1|0.31|ENSG00000163939|chr3:52587502-52587503|-/T|frameshift_variant', 'PBRM1|p.P1361Hfs*23|1|0.28|ENSG00000163939|chr3:52563287-52563287|G/-|frameshift_variant'] 62737 7676 LLYLRMFKLK True NCI_RA007_Epitope_Rep2 1323.81008500235 1323.8089899358602 34.484 2 -0.6134616896743061 0.17844464429403134 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'AFF2|p.P472Nfs*24|2|0.14|ENSG00000155966|chrX:148953596-148953596|C/AA|frameshift_variant', 'nc|ENSG00000155966|P51816-7|AFF2'] 84171 8425 QESASNLGLK True NCI_RA007_Epitope_Rep5 1045.5403880001697 1045.53928993586 39.086 2 -0.6134650871526985 0.17844464429403134 1.0 ['DCDC1|p.I1627Kfs*18|1|0.15|ENSG00000170959|chr11:30894261-30894261|A/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.M1392*|1|0.16|ENSG00000170959|chr11:30905096-30905096|C/-|frameshift_variant', 'ENST00000342355.8_1_11:30965860-31263019:-|nuORF'] 77781 21896 PADLLLFLI True PC9_epitope_Rep6 1013.61611913973 1013.61502993586 97.124 2 -0.6134843824122067 0.17844464429403134 1.0 ['ENST00000455309.1_1_2:112249080-112249152:+|nuORF'] 69037 6153 LVHYMNVAK True NCI_RA007_Epitope_Rep1 1073.56918603065 1073.5680899358601 27.971 2 -0.6134905143162561 0.17844464429403134 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant'] 58262 10637 LETAMHVKEK True PC9_epitope_Rep2 1184.62234380232 1184.62124993586 46.228 2 -0.6135138799181864 0.17844464429403134 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 73403 16759 NESAVIVAP True PC9_epitope_Rep2 898.4759968384599 898.47544496793 69.71 1 -0.6135474585125705 0.17844464429403134 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 125694 21450 VNASRTRI True PC9_epitope_Rep4 915.52501271955 915.52390993586 90.695 2 -0.6135545812255437 0.17845197526189574 1.0 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7'] 72818 17795 NAKEFFENWVL True PC9_epitope_Rep5 1395.68230120659 1395.6812099358601 73.466 2 -0.6135722856545098 0.17845197526189574 1.0 ['ENST00000533972.5_1_11:76158022-76224483:+|nuORF'] 127187 22794 VQFVPPLPEWK True PC9_epitope_Rep4 1338.7336085034597 1338.73195490379 95.898 3 -0.6135825585401589 0.17845197526189574 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 46570 13765 ITRKSFTEDK True H1975_Epitope_Rep3 1223.6510010783097 1223.64990993586 58.248 2 -0.6136635636676463 0.1784936736818856 1.0 ['HEPHL1|p.G50R|1|0.23|ENSG00000181333|chr11:94021516-94021516|G/C|missense_variant'] 45937 6185 ISSARAPVP True H1975_Epitope_Rep3 896.5079656730799 896.50686993586 28.803 2 -0.6136706307700903 0.1784936736818856 1.0 ['nc|ENSG00000162419|Q9Y692|GMEB1', 'ENSG00000162419|ENST00000373816|GMEB1'] 127782 671 VRKRRIKKS True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 3.7357 3 -0.61368328451814 0.1785066338523672 1.0 ['ENSG00000151914|ENST00000680361|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-11|DST'] 41637 4051 IDIDEDRETEK True PC9_epitope_Rep4 1361.63105347937 1361.6293949037902 21.846 3 -0.6137263532796726 0.17855114532719127 1.0 ['RASA2|p.R760K|1|0.21|ENSG00000155903|chr3:141609473-141609473|G/A|missense_variant'] 41291 5654 IAGSADSKP True NCI_RA007_Epitope_Rep2 844.42904664604 844.4279499358599 26.607 2 -0.6137505872129758 0.17856128726928538 1.0 ['ENSG00000164022|ENST00000672341|AIMP1', 'nc|ENSG00000164022|Q12904-2|AIMP1'] 64775 13814 LRSDTIPI True PC9_epitope_Rep4 913.5232813840499 913.5227349679301 61.031 1 -0.6137622751986842 0.17856128726928538 1.0 ['NEB|p.A3019T|1|0.36|ENSG00000183091|chr2:151629586-151629586|C/T|missense_variant'] 39683 10237 HPTENLIASA True PC9_epitope_Rep1 1051.52982331647 1051.5287299358602 44.258 2 -0.6139522173811431 0.17862157088545694 1.0 ['ENSG00000196981|ENST00000330689|WDR5B'] 77719 5920 PAAHRFPDGP True NCI_RA007_Epitope_Rep4 1063.51992733911 1063.5188299358601 29.393 2 -0.6140325854792659 0.17863339537524844 1.0 ['ENST00000390672.2_3_19:5783973-5784096:-|nuORF'] 41818 20857 IDSIHLLLSP True PC9_epitope_Rep5 1106.63356010902 1106.6324699358602 85.277 2 -0.6140843373920338 0.17863339537524844 1.0 ['ENSG00000066739|ENST00000359933|ATG2B'] 82422 10239 PVATVKYT True PC9_epitope_Rep3 877.4909186266099 877.48982993586 44.334 2 -0.614095493462492 0.17863339537524844 1.0 ['nc|ENSG00000182333|P07098-2|LIPF', 'nc|ENSG00000182333|P07098-4|LIPF', 'ENSG00000182333|ENST00000238983|LIPF', 'nc|ENSG00000182333|P07098-3|LIPF'] 27625 19399 FPWWLCLG True PC9_epitope_Rep2 1020.4891448047998 1020.48804993586 79.996 2 -0.6141079463685465 0.17863339537524844 1.0 ['ENST00000294072.8_2_11:61117466-61117760:-|nuORF'] 60312 12091 LIFESRMQRF True NCI_RA007_Epitope_Rep5 1325.69142642165 1325.68978490379 53.164 3 -0.6141242083865575 0.17863339537524844 1.0 ['ENST00000513391.2_2_4:48834645-48835423:+|nuORF', 'ENST00000510824.5_2_4:48834645-48834714:+|nuORF', 'ENST00000509122.5_1_4:48834645-48844682:+|nuORF'] 5372 19363 ALTRNRRTRRW True NCI_RA007_Epitope_Rep1 1484.85489489136 1484.85378993586 79.474 2 -0.6141277491851572 0.17863339537524844 1.0 ['ENST00000575285.1_1_16:3273894-3274698:-|nuORF', 'nc|ENSG00000010539|P98182-3|ZNF200', 'nc|ENSG00000010539|P98182-2|ZNF200', 'ENSG00000010539|ENST00000414144|ZNF200'] 26802 13558 FLDYYVAY True H1975_Epitope_Rep1 1052.4854988929999 1052.4844099358602 57.276 2 -0.6141676088237157 0.17863339537524844 1.0 ['nc|ENSG00000214694|A8MVX0|ARHGEF33', 'ENSG00000214694|ENST00000409978|ARHGEF33'] 98128 21253 SIASEWFLI True PC9_epitope_Rep3 1064.55424715916 1064.5531499358601 87.043 2 -0.6141993567593943 0.17865930599369084 1.0 ['nc|ENSG00000163393|Q8IZD6-2|SLC22A15', 'ENSG00000163393|ENST00000369503|SLC22A15'] 23496 14183 EWDDDFSPD True NCI_RA007_Epitope_Rep5 1124.3934489829599 1124.39234993586 61.246 2 -0.6142000151671381 0.17865930599369084 1.0 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 99100 14826 SLAEHHEVL True PC9_epitope_Rep2 1033.51925863277 1033.5181699358602 62.291 2 -0.6142704546098534 0.178708303761533 1.0 ['ENSG00000151576|ENST00000281273|QTRT2', 'nc|ENSG00000151576|Q9H974-4|QTRT2', 'ENST00000466870.1_1_3:113784185-113787033:+|nuORF', 'ENST00000460163.1_1_3:113775820-113785138:+|nuORF', 'ENST00000466050.5_1_3:113775696-113789591:+|nuORF'] 137219 16790 YLEQLFEL True NCI_RA007_Epitope_Rep4 1053.5382627418498 1053.5371699358602 72.766 2 -0.6142849080906192 0.178708303761533 1.0 ['ENSG00000161040|ENST00000440067|FBXL13'] 14722 22120 DVRRIYKRR True NCI_RA007_Epitope_Rep5 1260.7527212385996 1260.75106490379 92.217 3 -0.6142862229435567 0.178708303761533 1.0 ['ENSG00000035681|ENST00000038176|NSMAF', 'nc|ENSG00000035681|Q92636-2|NSMAF', 'ENST00000519858.1_1_8:59513803-59535956:-|nuORF'] 79400 16915 PGLRVLVL True PC9_epitope_Rep4 865.5749230340899 865.57382993586 73.052 2 -0.614289979220684 0.178708303761533 1.0 ['ENST00000269397.8_2_17:77807391-77807700:-|nuORF'] 72643 19756 MWGWWRWWEHR True NCI_RA007_Epitope_Rep1 1714.77280506018 1714.7717099358601 81.033 2 -0.6142925601612166 0.178708303761533 1.0 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 112187 11696 TLVTTLLT True H1975_Epitope_Rep3 860.5218844017201 860.52078993586 50.128 2 -0.6144326975067466 0.17871280102193696 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A', 'MUC3A|p.S2662Ffs*13|3|0.16|ENSG00000169894|chr7:100959764-100959764|C/-|frameshift_variant', 'MUC3A|p.T2783Hfs*2|1|0.21|ENSG00000169894|chr7:100960120-100960121|-/C|frameshift_variant'] 133410 10437 WFTMSFSYY True H1975_Epitope_Rep2 1230.50558271458 1230.5044899358602 45.161 2 -0.6144492503320731 0.17871280102193696 1.0 ['SV2A|p.E490Sfs*3|1|0.38|ENSG00000159164|chr1:149908118-149908118|C/-|frameshift_variant', 'nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 36994 12370 GVRRSFRK True NCI_RA007_Epitope_Rep4 1004.5991807193199 1004.59808993586 54.577 2 -0.6144563252759424 0.17871280102193696 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 23357 13715 EVTNLIPDI True H1975_Epitope_Rep2 1012.5440763982799 1012.54296993586 57.899 2 -0.6144638881711828 0.17871280102193696 1.0 ['nc|ENSG00000125885|Q9UJA3-2|MCM8', 'nc|ENSG00000125885|Q9UJA3-3|MCM8', 'ENSG00000125885|ENST00000610722|MCM8', 'nc|ENSG00000125885|Q9UJA3-4|MCM8'] 44300 13544 ILYETKTKPD True NCI_RA007_Epitope_Rep4 1206.64960409598 1206.6485099358601 59.304 2 -0.6145088124849931 0.17871729771497957 1.0 ['ENST00000589123.5_2_19:3465565-3466177:+|nuORF'] 25587 14993 FESSTPCL True PC9_epitope_Rep4 882.3793195722999 882.37822993586 65.609 2 -0.6145154020444793 0.17871729771497957 1.0 ['ENSG00000197081|ENST00000356956|IGF2R'] 10166 21856 CCCCSCSWNQE True PC9_epitope_Rep3 1264.3439564000398 1264.3428499358602 89.372 2 -0.6145270760472687 0.17871729771497957 1.0 ['ENSG00000171700|ENST00000395042|RGS19'] 30150 13974 FYRKFRFWNWG True PC9_epitope_Rep2 1605.7993370778497 1605.7982499358602 59.025 2 -0.6145394124885221 0.17871729771497957 1.0 ['ENST00000327827.11_1_16:9212523-9212682:+|nuORF'] 72556 18311 MVKEVWRVLRE True NCI_RA007_Epitope_Rep2 1443.80203949979 1443.8009499358602 75.982 2 -0.6146261365135817 0.17877473783805092 1.0 ['nc|ENSG00000250317|Q8N5G0-2|SMIM20'] 76442 10549 NSWPSPTEP True H1975_Epitope_Rep1 1013.4454249861699 1013.44432993586 45.531 2 -0.6146776378500761 0.17877473783805092 1.0 ['ENSG00000125498|ENST00000336077|KIR2DL1', 'nc|ENSG00000125498|P43626-2|KIR2DL1', 'nc|ENSG00000243772|P43628-2|KIR2DL3', 'ENST00000415311.1_1_19:55270285-55278820:+|nuORF', 'ENSG00000243772|ENST00000342376|KIR2DL3', 'ENST00000339924.12_2_19:55351009-55359395:+|nuORF', 'nc|ENSG00000221957|P43632|KIR2DS4'] 118711 11551 VECRRERRWDR True H1975_Epitope_Rep3 1559.7851606490299 1559.78406993586 49.559 2 -0.614755086810158 0.17878768764980446 1.0 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF'] 42289 14656 IEIRSGVSI True PC9_epitope_Rep1 972.56039516876 972.55928993586 61.196 2 -0.6147937140081342 0.17884512283578793 1.0 ['ENSG00000170927|ENST00000371117|PKHD1'] 133659 16485 WKRMFLRQQRL True NCI_RA007_Epitope_Rep2 1560.8823555091597 1560.8806949037898 68.852 3 -0.6147989272578235 0.17884512283578793 1.0 ['ENST00000498541.1_1_10:113942591-113974138:-|nuORF'] 106565 16284 SVWNFLKRHK True PC9_epitope_Rep2 1313.73567419213 1313.73403490379 67.88 3 -0.6148213116359404 0.17884961054523668 1.0 ['ENSG00000034693|ENST00000367591|PEX3'] 914 10893 ADQTAVQLP True PC9_epitope_Rep2 941.4818104948899 941.48070993586 47.216 2 -0.6148526751479937 0.17884961054523668 1.0 ['nc|ENSG00000138780|Q8NEC7-3|GSTCD', 'ENSG00000138780|ENST00000515279|GSTCD'] 86224 3954 QPYKREGKWHK True NCI_RA007_Epitope_Rep2 1455.77351625283 1455.7718849037901 20.017 3 -0.6148801772742074 0.17884961054523668 1.0 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-3|CCPG1', 'ZNF33B-CCPG1|2|fusion', 'ENST00000310958.10_2_15:55648420-55648633:-|nuORF'] 71692 8422 MLYDSWDQRRR True PC9_epitope_Rep1 1524.72558008424 1524.7239449037902 37.231 3 -0.6149116718551335 0.17884961054523668 1.0 ['ENSG00000184560|ENST00000333870|SPEM2'] 90808 25110 RKSGATGG True NCI_RA007_Epitope_Rep5 732.3878505403999 732.38730496793 104.09 1 -0.6150191457296562 0.1788755045408678 1.0 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 27423 4492 FNGMMSLHKVK True NCI_RA007_Epitope_Rep2 1290.6576837652203 1290.6565899358602 22.105 2 -0.6150236862223901 0.1788755045408678 1.0 ['ENST00000502271.5_1_5:53181576-53181639:-|nuORF'] 129604 6813 VTGRQMRLCK True H1975_Epitope_Rep1 1190.6376170269798 1190.6365099358602 31.248 2 -0.6150466451647265 0.17887998990981901 1.0 ['ENST00000377403.6_1_1:9328830-9329223:+|nuORF'] 23515 6746 EWLRWRPL True NCI_RA007_Epitope_Rep3 1154.6348975217 1154.63326490379 33.627 3 -0.6150856599956075 0.17887998990981901 1.0 ['ENST00000571698.2_2_17:44249328-44271124:-|nuORF', 'ENST00000574590.6_2_17:44249328-44301084:-|nuORF', 'ENST00000262419.10_2_17:44249328-44269907:-|nuORF'] 80775 16740 PLSLTALKL True PC9_epitope_Rep6 954.6113681124599 954.61026993586 76.88 2 -0.6150970376012239 0.17887998990981901 1.0 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1'] 58850 11233 LFRTEPMAWNE True PC9_epitope_Rep1 1392.6496211793199 1392.64798490379 48.087 3 -0.6151011241977442 0.17887998990981901 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41277978-41278230:+|nuORF'] 29484 3251 FVIFFFFFWYF True NCI_RA007_Epitope_Rep1 1608.7845814471596 1608.78237987172 16.538 4 -0.6151245253634477 0.1788929354080941 1.0 ['ENST00000316423.10_1_4:39501678-39501759:-|nuORF'] 135760 10991 YEMYVSILK True PC9_epitope_Rep4 1144.58383303528 1144.58272993586 50.052 2 -0.6152277735468434 0.17893459034226167 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 95922 13724 SDVVSTRPRWN True NCI_RA007_Epitope_Rep2 1315.66329709751 1315.6622099358601 58.028 2 -0.6152405631145003 0.17893459034226167 1.0 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6', 'ENSG00000128159|ENST00000248846|TUBGCP6', 'nc|ENSG00000128159|Q96RT7-2|TUBGCP6', 'ENST00000491449.5_1_22:50658476-50664613:-|nuORF'] 127376 6913 VQPVWLEFP True H1975_Epitope_Rep3 1113.5858816406098 1113.58478993586 31.551 2 -0.6152738921989848 0.17894753436751168 1.0 ['nc|ENSG00000142330|Q9HC96-7|CAPN10'] 122382 18567 VGSFLSVTV True PC9_epitope_Rep6 907.5014833103099 907.50038993586 84.058 2 -0.615335065514481 0.1789548356585481 1.0 ['ENST00000261439.8_1_4:38139186-38139444:+|nuORF'] 94166 12902 RWLEKEERFLK True NCI_RA007_Epitope_Rep2 1532.8463468399198 1532.84470490379 54.806 3 -0.6153461756205767 0.1789548356585481 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 78686 20317 PEDLASKIL True PC9_epitope_Rep4 984.54916177872 984.54806993586 86.292 2 -0.6153595616018297 0.1789548356585481 1.0 ['ENST00000479016.2_1_12:56618280-56618448:+|nuORF'] 107554 4884 TADTTTHVTP True H1975_Epitope_Rep2 1042.49310345458 1042.49200993586 23.871 2 -0.6154064263656276 0.1789677785484583 1.0 ['nc|ENSG00000182871|P39060-1|COL18A1', 'nc|ENSG00000182871|P39060|COL18A1'] 17474 6376 EHGPENIVM-[Oxidation] True PC9_epitope_Rep2 1040.45969553176 1040.4585899358601 29.928 2 -0.6154086266109217 0.178975078421791 1.0 ['ENST00000580361.1_1_18:9814067-9815220:+|nuORF', 'ENST00000578737.5_1_18:9792160-9816141:+|nuORF', 'ENSG00000168461|ENST00000578921|RAB31'] 113957 3879 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 21.55 3 -0.6154167178223151 0.178975078421791 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 40329 24274 HRRVRLHRHG True PC9_epitope_Rep1 1322.76568596414 1322.7640349037902 98.192 3 -0.6154225651389825 0.178975078421791 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 52934 22199 KRKKRKKKRQK True PC9_epitope_Rep3 1511.0372163577797 1511.0361099358602 90.674 2 -0.6154543252830462 0.17900378310214377 1.0 ['ENST00000357337.10_1_13:77671591-77671720:-|nuORF'] 113956 3815 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 21.209 3 -0.6154880848127441 0.1790167242004382 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 16577 13805 EERCEGLI True PC9_epitope_Rep5 947.4382314307499 947.43712993586 58.121 2 -0.6154982851520132 0.17902966489076638 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 93074 17341 RRRKTKSVP True H1975_Epitope_Rep2 1126.70470841702 1126.7036099358602 71.996 2 -0.6155792111633851 0.17904707866408184 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 43184 4368 IGSPSFQDK True NCI_RA007_Epitope_Rep4 977.48181049489 977.48070993586 23.15 2 -0.6156067763444913 0.17904707866408184 1.0 ['ENST00000452761.1_1_2:110745136-110745940:-|nuORF'] 25358 13546 FEGPGCGR True NCI_RA007_Epitope_Rep2 821.3490225035299 821.3484749679301 57.334 1 -0.6156109748283225 0.17904707866408184 1.0 ['ENST00000263974.4_1_1:28969267-28969489:-|nuORF'] 4914 9063 ALGSERLSP True PC9_epitope_Rep2 928.4977949121999 928.49668993586 40.206 2 -0.6156121773382626 0.17904707866408184 1.0 ['ENST00000417736.2_1_18:12308439-12326126:+|nuORF'] 75837 7087 NRDLATPVM-[Oxidation] True PC9_epitope_Rep5 1031.50698007735 1031.50588993586 32.226 2 -0.6156133459737013 0.17904707866408184 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 81578 18497 PRKRLQTLQRC True NCI_RA007_Epitope_Rep5 1397.8037708352897 1397.80213490379 77.974 3 -0.6157356622864832 0.17912023830162807 1.0 ['ENST00000541931.5_1_12:31854930-31882022:-|nuORF', 'ENST00000281471.10_1_12:31862342-31882100:-|nuORF'] 5634 7691 APAEVRLTPP True H1975_Epitope_Rep1 1049.58694426977 1049.58584993586 34.549 2 -0.6157388822308375 0.17912023830162807 1.0 ['ENSG00000163482|ENST00000295709|STK36', 'STK36|p.E1226Pfs*43|1|0.22|ENSG00000163482|chr2:218699219-218699244|AGAGGAGCTGTTACAGTGCGAAGTAC/-|frameshift_variant', 'ENST00000473681.1_1_2:219559265-219561354:+|nuORF'] 102130 4916 SPQRIASAV True PC9_epitope_Rep4 927.5137793295098 927.51268993586 25.504 2 -0.6157900654826858 0.1791331757289204 1.0 ['ENSG00000112139|ENST00000434837|MDGA1', 'nc|ENSG00000112139|Q8NFP4-2|MDGA1'] 82961 11531 PWWDDWER True PC9_epitope_Rep5 1188.4988575413597 1188.4972049037901 49.35 3 -0.6158163116585974 0.17915904936014626 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant', 'YLPM1|p.R1261Q|1|0.27|ENSG00000119596|chr14:74799079-74799079|G/A|missense_variant'] 12942 10741 DLNSGNIDVP True PC9_epitope_Rep4 1042.49310345458 1042.49200993586 49.072 2 -0.6158406383332757 0.17915904936014626 1.0 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 137572 13053 YLSLHPQV True PC9_epitope_Rep4 955.5127167003501 955.51160993586 58.103 2 -0.6158901442251598 0.1791719855641183 1.0 ['PDE10A|p.V531Sfs*3|1|0.53|ENSG00000112541|chr6:165392711-165392711|C/-|frameshift_variant', 'PDE10A|p.L582Wfs*33|1|0.24|ENSG00000112541|chr6:165388366-165388366|G/-|frameshift_variant', 'ENSG00000112541|ENST00000539869|PDE10A', 'nc|ENSG00000112541|Q9Y233-1|PDE10A', 'nc|ENSG00000112541|Q9Y233-2|PDE10A'] 48677 7095 KELGDAWN True PC9_epitope_Rep1 931.43994568291 931.43884993586 32.1 2 -0.6159510236383678 0.1792321997037224 1.0 ['ENSG00000178694|ENST00000314622|NSUN3', 'ENST00000476588.5_1_3:93781949-93803329:+|nuORF', 'ENST00000485793.5_1_3:93781949-93800453:+|nuORF'] 43716 20366 IIRLRNKTLTE True H1975_Epitope_Rep3 1355.8248831193498 1355.82378993586 85.156 2 -0.6160078909201477 0.1792423096318709 1.0 ['nc|ENSG00000101109|Q13043-2|STK4', 'ENSG00000101109|ENST00000372806|STK4'] 69241 14174 LVNKHNVHSP True PC9_epitope_Rep3 1143.61489035311 1143.61378993586 59.604 2 -0.6160323145822331 0.1792423096318709 1.0 ['ENSG00000198824|ENST00000361283|CHAMP1'] 26905 11000 FLGFSYAP True PC9_epitope_Rep3 900.4381547777599 900.43704993586 47.298 2 -0.616038517046613 0.1792495942261933 1.0 ['nc|ENSG00000118515|O00141-4|SGK1', 'nc|ENSG00000118515|O00141|SGK1', 'nc|ENSG00000118515|O00141-3|SGK1', 'nc|ENSG00000118515|O00141-5|SGK1', 'ENSG00000118515|ENST00000367858|SGK1', 'ENST00000477460.6_1_6:134491408-134493948:-|nuORF', 'ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 115854 18403 TVNNKLYVI True PC9_epitope_Rep6 1062.60734536118 1062.6062499358602 83.433 2 -0.6160508004380507 0.1792495942261933 1.0 ['ENSG00000187715|ENST00000405109|KBTBD12'] 7825 7371 ATAELIMSR True NCI_RA007_Epitope_Rep3 990.51681610462 990.51570993586 36.121 2 -0.6160564928270185 0.1792495942261933 1.0 ['ENSG00000105677|ENST00000222284|TMEM147', 'nc|ENSG00000105677|Q9BVK8-2|TMEM147', 'ENST00000477168.6_1_19:36036641-36037810:+|nuORF', 'ENST00000595467.1_1_19:36037522-36037810:+|nuORF'] 20832 12650 EQPQWGRRTR True H1975_Epitope_Rep3 1312.6748648407197 1312.67376993586 53.865 2 -0.6161256178548212 0.17929404349196343 1.0 ['ENST00000461684.5_1_3:184098935-184099814:+|nuORF'] 81043 19151 PPAFSFGLGL True PC9_epitope_Rep6 1004.5331177917599 1004.53202993586 86.316 2 -0.6161612204316947 0.17930132518160188 1.0 ['chr5:90929313-90965415|333|22.99|0.23|6.64|+|1|TE_info:L1PA2,L1PA2_dup1646,L1,LINE,donor,-,90923631,90929313|None,ADGRV1|19'] 124904 9529 VLLQWQIWWPW True NCI_RA007_Epitope_Rep2 1553.8183411869297 1553.8166849037902 41.679 3 -0.6161863444382734 0.17930132518160188 1.0 ['ENST00000476910.6_1_X:101855946-101856849:+|nuORF'] 95679 12092 SAVVVQLSV True PC9_epitope_Rep2 900.5280324113199 900.52692993586 51.821 2 -0.6162118812038794 0.17930132518160188 1.0 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1'] 17932 21403 EIEKYPLQLF True PC9_epitope_Rep1 1278.6859896046997 1278.6848899358602 87.161 2 -0.6163443082062626 0.17940597179547782 1.0 ['ENSG00000127954|ENST00000380079|STEAP4'] 72588 11338 MVQKYQSPV True H1975_Epitope_Rep3 1078.5481162329 1078.5470099358602 48.722 2 -0.6163569868219757 0.17940597179547782 1.0 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'SEC14L1|p.Y98Lfs*35|1|0.11|ENSG00000129657|chr17:77191260-77191260|A/-|frameshift_variant', 'ENST00000588696.5_1_17:75139678-75139750:+|nuORF'] 138588 10145 YRPQYGYWVIG True PC9_epitope_Rep3 1400.6877209401998 1400.68662993586 43.976 2 -0.6164107827308981 0.1794504143951092 1.0 ['nc|ENSG00000132274|Q8IYM9-2|TRIM22', 'ENSG00000132274|ENST00000379965|TRIM22'] 116480 14353 TYDETYQRYRP True PC9_epitope_Rep2 1490.6790067313 1490.67790993586 60.47 2 -0.6164432527685394 0.17946051553538792 1.0 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 25096 12620 FDIQLLTHN True PC9_epitope_Rep3 1099.56620882519 1099.5651099358602 53.566 2 -0.6164486695308502 0.17946051553538792 1.0 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 5059 11284 ALLLASCL True PC9_epitope_Rep1 802.46226135062 802.46116993586 48.283 2 -0.6164677770859336 0.17948919945170083 1.0 ['ENST00000486040.1_1_7:2275163-2277700:-|nuORF', 'ENST00000242257.12_1_7:2275163-2279115:-|nuORF'] 93280 25166 RRRVRRRRMET True PC9_epitope_Rep5 1570.91751223126 1570.9164099358602 101.95 2 -0.6164880177373967 0.17950212698912874 1.0 ['nc|ENSG00000203880|Q9NV79-2|PCMTD2', 'ENSG00000203880|ENST00000308824|PCMTD2', 'nc|ENSG00000203880|Q9NV79-3|PCMTD2', 'ENST00000266078.7_1_20:62903543-62904950:+|nuORF'] 48460 14516 KEELIGELVRT True NCI_RA007_Epitope_Rep1 1285.7241660185696 1285.7230699358602 60.51 2 -0.6165246304490104 0.17953080934600055 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 127749 25061 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 109.12 2 -0.6166222695642084 0.1795724166180896 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 31773 18167 GELLTQKPLFP True PC9_epitope_Rep2 1241.7019740220098 1241.70086993586 75.183 2 -0.6166296727626798 0.1795724166180896 1.0 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000248333|P21127-5|CDK11B', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'nc|ENSG00000248333|P21127-12|CDK11B', 'nc|ENSG00000248333|P21127-4|CDK11B', 'nc|ENSG00000248333|P21127-10|CDK11B', 'ENST00000463652.5_1_1:1635130-1635691:-|nuORF'] 54448 15314 KYTSWKPPF True PC9_epitope_Rep4 1152.59678067748 1152.59568993586 66.838 2 -0.6166369138008082 0.17960109651195766 1.0 ['CLNK|p.R292K|1|0.26|ENSG00000109684|chr4:10513495-10513495|C/T|missense_variant'] 17098 19279 EGRPPENKRS True PC9_epitope_Rep1 1168.59488318452 1168.59322490379 78.959 3 -0.6166885367754402 0.17962694561724116 1.0 ['ENSG00000112320|ENST00000317357|SOBP', 'ENST00000477448.1_1_6:107811820-107879187:+|nuORF', 'SOBP|p.I126Lfs*5|1|0.43|ENSG00000112320|chr6:107506379-107506379|C/-|frameshift_variant'] 33754 12342 GLSHPQTPWWP True NCI_RA007_Epitope_Rep1 1304.63020606408 1304.62910993586 51.98 2 -0.6166886575256865 0.17962694561724116 1.0 ['ENST00000455245.1_1_9:68413936-68413987:-|nuORF'] 10514 6101 CPEEALAR True H1975_Epitope_Rep3 887.4171020633498 887.41600993586 28.479 2 -0.6167164206366624 0.1796657162211125 1.0 ['ENSG00000145103|ENST00000344209|ILDR1', 'nc|ENSG00000145103|Q86SU0-4|ILDR1', 'nc|ENSG00000145103|Q86SU0-3|ILDR1', 'ENST00000460554.1_1_3:121712781-121740924:-|nuORF'] 129575 9813 VTGLEKGNKY True H1975_Epitope_Rep1 1107.59242357303 1107.5913299358601 42.673 2 -0.6167453897798638 0.1796657162211125 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 4532 6664 AKQFFQDKARF True H1975_Epitope_Rep1 1384.7251690780797 1384.7240699358601 30.685 2 -0.6167605353152203 0.1796657162211125 1.0 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 117685 9558 VAKKKEAP True PC9_epitope_Rep1 869.5334521449298 869.53234993586 41.623 2 -0.6168035902244974 0.17969439193446754 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 25688 5464 FFFKLYQRS True NCI_RA007_Epitope_Rep3 1234.6498788795 1234.6482449037899 28.501 3 -0.6168355759131504 0.17971740465951513 1.0 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|148|2|anti-sense'] 43826 23159 IKRYCKIVP True PC9_epitope_Rep3 1118.6634207686598 1118.66232993586 94.352 2 -0.6168419707218039 0.17971740465951513 1.0 ['L1ME3G_dup9716|chrX:131361372-131362238:-|1.162874050545019|0.102023693220256|3.51|470.0|39|1|anti-sense'] 34284 6914 GPLSHHYCAYT True NCI_RA007_Epitope_Rep3 1247.53934245435 1247.53768490379 34.299 3 -0.6168425330701705 0.17971740465951513 1.0 ['MARCHF4|p.H376Y|1|0.09|ENSG00000144583|chr2:216259419-216259419|G/A|missense_variant'] 98810 14818 SITKGVIYI True PC9_epitope_Rep4 992.5906326678798 992.58952993586 64.934 2 -0.6168942366700836 0.17974324643616602 1.0 ['nc|ENSG00000123901|Q9NYM4-2|GPR83', 'ENSG00000123901|ENST00000243673|GPR83'] 20217 7083 ENTPDLVSD True NCI_RA007_Epitope_Rep5 988.43491987212 988.43382993586 33.927 2 -0.6169030681476073 0.17974324643616602 1.0 ['ENSG00000137090|ENST00000382276|DMRT1', 'nc|ENSG00000137090|Q9Y5R6-2|DMRT1', 'ENST00000564322.1_1_9:841703-894198:+|nuORF'] 11259 4629 DERAQKRQPIR True NCI_RA007_Epitope_Rep2 1395.7694935015497 1395.7678349037901 22.63 3 -0.6169171774512918 0.179763423585188 1.0 ['nc|ENSG00000091428|Q8WZA2-2|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-5|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-4|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-3|RAPGEF4', 'ENSG00000091428|ENST00000397081|RAPGEF4'] 129780 17554 VTKRTRSL True NCI_RA007_Epitope_Rep4 959.5876129761099 959.58650993586 75.97 2 -0.6169249861400629 0.179763423585188 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 46419 10119 ITLCLICHWR True PC9_epitope_Rep5 1256.6522044619599 1256.65054490379 43.907 3 -0.6169314503461203 0.179763423585188 1.0 ['ENST00000559153.5_1_15:40824061-40824274:-|nuORF'] 101276 8910 SLWRSKSV True PC9_epitope_Rep1 961.53451477409 961.53340993586 39.111 2 -0.6169810624143007 0.179763423585188 1.0 ['ENSG00000182827|ENST00000366812|ACBD3'] 66218 9940 LSPRPKASPPP True NCI_RA007_Epitope_Rep5 1145.6556925359298 1145.65458993586 44.876 2 -0.6170146745317626 0.17977634273113877 1.0 ['ENSG00000214929|ENST00000344803|SPATA31D1', 'SPATA31D1|p.L208*|1|0.11|ENSG00000214929|chr9:81991092-81991092|T/-|frameshift_variant'] 128648 18701 VSLLRLRL True H1975_Epitope_Rep2 968.64948495668 968.64838993586 77.632 2 -0.6170491988637107 0.1798021798021798 1.0 ['ENST00000590444.5_1_19:6471408-6475578:-|nuORF', 'nc|ENSG00000205744|Q8IV53-2|DENND1C', 'ENSG00000205744|ENST00000381480|DENND1C'] 128945 7137 VSVETRNV True PC9_epitope_Rep3 902.48214484806 902.48104993586 32.461 2 -0.6170724887474279 0.1798021798021798 1.0 ['ENST00000341853.5_1_15:100340094-100345094:-|nuORF', 'nc|ENSG00000182397|Q6ZS02|DNM1P46'] 30470 3500 GAGIHHQAD True NCI_RA007_Epitope_Rep1 904.4151279173999 904.41402993586 17.529 2 -0.6170941704299875 0.17981509772730853 1.0 ['MRC2|p.K360Qfs*95|1|0.3|ENSG00000011028|chr17:62667492-62667493|-/C|frameshift_variant'] 15259 10793 EAGPKGGEELP True H1975_Epitope_Rep3 1082.5244035828598 1082.5233099358602 46.596 2 -0.6171322242386356 0.17986959808491873 1.0 ['ENST00000433948.5_2_12:50185624-50186122:-|nuORF'] 41929 7144 IEANSQHYQK True NCI_RA007_Epitope_Rep1 1216.58364979448 1216.58254993586 31.779 2 -0.6171393571232303 0.17986959808491873 1.0 ['ENSG00000135968|ENST00000309863|GCC2', 'GCC2|p.N233Ifs*12|1|0.12|ENSG00000135968|chr2:108470021-108470021|A/-|frameshift_variant'] 59238 8595 LGGLKLDTP True H1975_Epitope_Rep3 912.5280324113199 912.52692993586 38.052 2 -0.6171609300149387 0.17986959808491873 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'TOGARAM2|p.G616Rfs*15|1|0.23|ENSG00000189350|chr2:29024366-29024367|-/C|frameshift_variant', 'TOGARAM2|p.K82N|1|0.29|ENSG00000189350|chr2:28999287-28999287|G/C|missense_variant'] 128249 13654 VRWRMRKLK True NCI_RA007_Epitope_Rep3 1271.77609953547 1271.77444490379 61.018 3 -0.6172298559196672 0.17989542977731582 1.0 ['nc|ENSG00000136270|Q969Z0-2|TBRG4', 'ENSG00000136270|ENST00000258770|TBRG4'] 17549 13150 EHIQAPKTV True PC9_epitope_Rep5 1021.5556441414899 1021.55454993586 55.586 2 -0.6172334052925883 0.17989542977731582 1.0 ['ENST00000581139.1_1_18:2946096-2946618:-|nuORF'] 99600 18367 SLFLWYLV True PC9_epitope_Rep4 1039.57425432775 1039.57314993586 78.714 2 -0.6173330124111976 0.17996850393700786 1.0 ['ENSG00000168394|ENST00000354258|TAP1', 'nc|ENSG00000168394|Q03518-2|TAP1'] 81984 4825 PSSAQAAVI True PC9_epitope_Rep4 842.4497820906199 842.44868993586 25.14 2 -0.6173386093004133 0.17996850393700786 1.0 ['ENST00000533443.5_3_11:44960744-44968624:-|nuORF'] 133655 21052 WKRKEDKKRVV True H1975_Epitope_Rep1 1470.87831567454 1470.87667490379 87.44 3 -0.6174360990975503 0.17999433088721614 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 82914 4125 PWDLWPPP True H1975_Epitope_Rep1 1006.4912529797799 1006.49014993586 20.786 2 -0.6174454198799567 0.17999433088721614 1.0 ['ENST00000321751.9_1_1:1309740-1310526:-|nuORF', 'ENST00000338338.9_1_1:1309740-1310620:-|nuORF', 'ENST00000378853.3_1_1:1309740-1310526:-|nuORF'] 59361 16392 LGKVEEAL True PC9_epitope_Rep4 857.4858332461698 857.48472993586 71.013 2 -0.6175744253058437 0.18005448561485285 1.0 ['ENST00000472173.5_1_X:118112321-118146861:+|nuORF', 'nc|ENSG00000175556|Q496Y0-3|LONRF3', 'ENSG00000175556|ENST00000371628|LONRF3'] 6022 18536 APLLWSHLVP True PC9_epitope_Rep2 1131.6440652230701 1131.64296993586 76.649 2 -0.6176526032828449 0.1800803086371152 1.0 ['ENST00000598497.1_1_19:58601666-58601705:-|nuORF'] 25167 16333 FDSIVGVAAY True H1975_Epitope_Rep3 1040.51786165044 1040.51676993586 68.299 2 -0.6176604219758066 0.1800803086371152 1.0 ['ENSG00000196455|ENST00000356763|PIK3R4'] 41734 9023 IDNPEYSPDP True H1975_Epitope_Rep1 1145.48768372097 1145.4865899358601 39.613 2 -0.6177218978073793 0.18011904012092964 1.0 ['ENSG00000179218|ENST00000316448|CALR'] 127297 5836 VQLPAGVK True PC9_epitope_Rep3 810.49633836022 810.49524993586 27.515 2 -0.6177243021944921 0.18011904012092964 1.0 ['ENSG00000001630|ENST00000003100|CYP51A1'] 82644 17567 PVLNRPWLQA True PC9_epitope_Rep5 1192.67167695324 1192.6700249037901 72.579 3 -0.6177360298603599 0.18011904012092964 1.0 ['ENST00000562621.1_1_15:73048204-73048867:-|nuORF'] 33089 8728 GKHQHFQEPEV True NCI_RA007_Epitope_Rep1 1334.6367479965002 1334.63509490379 37.951 3 -0.6177722927701279 0.180126277337784 1.0 ['ENST00000514705.5_1_5:176074565-176079944:+|nuORF', 'nc|ENSG00000048140|Q96FV3-2|TSPAN17', 'nc|ENSG00000048140|Q96FV3-3|TSPAN17', 'nc|ENSG00000048140|Q96FV3|TSPAN17', 'ENSG00000048140|ENST00000508164|TSPAN17'] 3028 6940 AFSRAHRIGQA True NCI_RA007_Epitope_Rep5 1212.64758746372 1212.64648993586 33.379 2 -0.6177928802576127 0.180126277337784 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 117999 5630 VASIETGLAA True NCI_RA007_Epitope_Rep4 930.5022115862998 930.50110993586 28.257 2 -0.6178014314644402 0.180126277337784 1.0 ['nc|ENSG00000172943|Q9UPP1-4|PHF8', 'nc|ENSG00000172943|Q9UPP1-3|PHF8', 'ENSG00000172943|ENST00000338154|PHF8', 'nc|ENSG00000172943|Q9UPP1|PHF8', 'nc|ENSG00000172943|Q9UPP1-5|PHF8', 'ENSG00000197724|ENST00000359246|PHF2'] 69801 21750 LWRRRKWPFDR True NCI_RA007_Epitope_Rep1 1614.90078245462 1614.8996899358601 89.018 2 -0.6178326048805333 0.1801549313515556 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 80856 12226 PLVKGVSV True PC9_epitope_Rep1 797.50108938749 797.49998993586 51.887 2 -0.6179149275793263 0.18019932927117283 1.0 ['ENST00000394111.6_1_2:73143891-73161080:+|nuORF'] 65190 7170 LSDVTHSAV True NCI_RA007_Epitope_Rep5 927.46616043075 927.46506993586 34.254 2 -0.618007166941157 0.1802352126202434 1.0 ['ENSG00000115977|ENST00000409085|AAK1', 'nc|ENSG00000115977|Q2M2I8-2|AAK1'] 61565 15996 LLGLKKLSFYY True NCI_RA007_Epitope_Rep5 1343.78530972315 1343.7842099358602 68.256 2 -0.6180679337116987 0.1802352126202434 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 83270 8252 QAEQWAAEFI True H1975_Epitope_Rep1 1191.5560380643099 1191.5549499358601 36.681 2 -0.6180790960258621 0.1802352126202434 1.0 ['nc|ENSG00000139197|P50542-3|PEX5', 'ENSG00000139197|ENST00000675855|PEX5', 'nc|ENSG00000139197|P50542-4|PEX5'] 26399 22465 FIKRIWRELFV True PC9_epitope_Rep3 1505.8870894530896 1505.8859899358602 91.688 2 -0.6180808704003399 0.1802352126202434 1.0 ['ENST00000424989.1_1_1:37921191-37921512:-|nuORF'] 57116 8387 LEENTTEEK True H1975_Epitope_Rep3 1091.49824840467 1091.49714993586 37.244 2 -0.6181399754369826 0.1802610242604575 1.0 ['STK33|p.V408L|1|0.09|ENSG00000130413|chr11:8413617-8413617|C/G|missense_variant'] 119185 11608 VEKIQEIRYRS True H1975_Epitope_Rep1 1419.78341223019 1419.7823099358602 49.64 2 -0.6181403450996098 0.1802610242604575 1.0 ['ENST00000509092.5_1_4:55124935-55146696:+|nuORF', 'nc|ENSG00000134853|P16234-3|PDGFRA', 'ENSG00000134853|ENST00000257290|PDGFRA'] 7063 5592 AQVLHVPS True PC9_epitope_Rep3 849.47085188837 849.46974993586 26.587 2 -0.6182118525727944 0.18030541561712846 1.0 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 77084 14771 NWRRVYKSL True PC9_epitope_Rep4 1220.6778249628396 1220.67672993586 64.749 2 -0.6182436078166441 0.18031831992569386 1.0 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1', 'ENSG00000113282|ENST00000411809|CLINT1'] 123512 8081 VIHGNVFLK True H1975_Epitope_Rep3 1025.6022004110898 1025.6011099358602 36.057 2 -0.6182773108124154 0.18033122382796513 1.0 ['ENST00000557638.1_1_14:36152973-36153102:-|nuORF'] 25095 8930 FDIQLLTHN True NCI_RA007_Epitope_Rep2 1099.56620882519 1099.5651099358602 39.36 2 -0.6183152288380207 0.18035419126328217 1.0 ['nc|ENSG00000023909|P48507-2|GCLM', 'ENSG00000023909|ENST00000370238|GCLM'] 97974 19082 SHRTRLVLKA True NCI_RA007_Epitope_Rep5 1179.72002412799 1179.71836490379 80.27 3 -0.6183356335311728 0.18035419126328217 1.0 ['nc|ENSG00000065621|Q9H4Y5-2|GSTO2', 'nc|ENSG00000065621|Q9H4Y5-3|GSTO2', 'ENSG00000065621|ENST00000338595|GSTO2'] 15547 21929 EASLANLLVI True PC9_epitope_Rep2 1041.60701100801 1041.6059099358602 89.826 2 -0.6183398851442982 0.18035419126328217 1.0 ['GLB1L|p.A110S|1|0.49|ENSG00000163521|chr2:219242830-219242830|C/A|missense_variant'] 33564 16039 GLKIGDTV True PC9_epitope_Rep6 801.45961849833 801.45852993586 74.017 2 -0.6183538997926774 0.18038283537449235 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 84419 11279 QGGFVRGRVP True PC9_epitope_Rep3 1071.5937609857099 1071.5926699358602 48.392 2 -0.6183873185731867 0.1804114785839092 1.0 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 32201 23880 GFFAAASF True H1975_Epitope_Rep1 816.3806399016399 816.3800949679301 99.119 1 -0.6183946003190818 0.18044012089157538 1.0 ['ENST00000563073.1_1_16:57258382-57272884:+|nuORF', 'ENST00000564530.5_1_16:57254621-57272884:+|nuORF', 'ENSG00000159579|ENST00000394420|RSPRY1'] 60913 9669 LKVLWCFLI True PC9_epitope_Rep5 1133.66710916677 1133.66545490379 42.158 3 -0.6185038350161339 0.18048166220683143 1.0 ['ENSG00000010322|ENST00000345716|NISCH', 'nc|ENSG00000010322|Q9Y2I1-2|NISCH', 'ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 83829 17114 QEFLTKLAF True PC9_epitope_Rep5 1095.5964463243097 1095.5953499358602 70.851 2 -0.6185293546720845 0.18048166220683143 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 46687 5992 ITWFANDREIK True H1975_Epitope_Rep1 1391.7197493444698 1391.71810490379 28.12 3 -0.6185440911249442 0.18049456171003134 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 9099 15163 AVLDRNVAI True PC9_epitope_Rep6 969.5607295219299 969.55962993586 70.4 2 -0.6186329708102231 0.18052320090662974 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 119851 16256 VEVQKLLKC True PC9_epitope_Rep3 1058.6158018699 1058.6147099358602 67.667 2 -0.618755574843753 0.1805647369912173 1.0 ['ENSG00000173988|ENST00000595396|LRRC63'] 124359 10739 VLDSRTIHIQW True NCI_RA007_Epitope_Rep1 1366.73573376178 1366.73462993586 45.766 2 -0.618832047295289 0.1805647369912173 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant'] 128649 18937 VSLLRLRL True H1975_Epitope_Rep2 968.64948495668 968.64838993586 78.61 2 -0.6188755409705781 0.18057479224376732 1.0 ['ENST00000590444.5_1_19:6471408-6475578:-|nuORF', 'nc|ENSG00000205744|Q8IV53-2|DENND1C', 'ENSG00000205744|ENST00000381480|DENND1C'] 55405 19831 LASWRWPHWSW True PC9_epitope_Rep5 1510.7258377844198 1510.72420490379 81.326 3 -0.6189073346559151 0.18057479224376732 1.0 ['ENST00000397397.6_1_11:866620-867061:+|nuORF'] 121492 11790 VGKFPLTT True NCI_RA007_Epitope_Rep3 861.4960040070499 861.49490993586 53.493 2 -0.6189835769646762 0.18063206270263465 1.0 ['ENST00000462315.5_1_3:122274899-122277292:-|nuORF'] 43200 14764 IGTTHPSIV True PC9_epitope_Rep4 923.50763131991 923.50652993586 64.723 2 -0.619006208119403 0.18063206270263465 1.0 ['nc|ENSG00000198520|Q6PIY5-2|ARMH1', 'ENST00000357508.5_1_1:45155363-45190065:+|nuORF', 'ENSG00000198520|ENST00000535358|ARMH1'] 66710 16225 LSTLATKTL True PC9_epitope_Rep6 946.5698972233 946.56880993586 74.771 2 -0.6190402825963611 0.1806606965800532 1.0 ['ENST00000561671.5_1_16:30017707-30020344:-|nuORF', 'ENST00000564357.5_1_16:30017509-30018480:-|nuORF', 'ENSG00000149927|ENST00000350119|DOC2A'] 79781 7421 PHWVRRRVR True NCI_RA007_Epitope_Rep4 1260.74282526124 1260.7411649037901 35.186 3 -0.6190602669537398 0.18066790469295899 1.0 ['ENST00000225964.9_1_17:48262093-48262309:-|nuORF'] 80816 15378 PLTIEGFAY True H1975_Epitope_Rep3 1009.5120479940099 1009.5114749679301 64.562 1 -0.6190694453417587 0.18066790469295899 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1', 'ENST00000594207.1_1_19:41774132-41786840:+|nuORF'] 99236 12220 SLCNHLKKLV True H1975_Epitope_Rep1 1153.66414904465 1153.66304993586 52.025 2 -0.6190781338113142 0.18066790469295899 1.0 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10'] 98797 16649 SISWSEPAV True PC9_epitope_Rep2 974.4709114580198 974.46980993586 69.284 2 -0.6190985234991896 0.18067795543245624 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 36991 12158 GVRRSFRK True NCI_RA007_Epitope_Rep3 1004.5991807193199 1004.59808993586 54.943 2 -0.6191574487663171 0.18067795543245624 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 43753 13973 IIVMEYLAL True PC9_epitope_Rep2 1063.59875482343 1063.59764993586 59.021 2 -0.6191768497390252 0.18069084900464238 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6'] 68005 12618 LTLYQSNTIL True PC9_epitope_Rep4 1164.63903941228 1164.63739490379 56.374 3 -0.6192434518878217 0.18070374217102572 1.0 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000489040.1_1_11:67351618-67352251:+|nuORF', 'GSTP1|p.G74Afs*20|1|0.12|ENSG00000084207|chr11:67584759-67584759|G/-|frameshift_variant', 'ENST00000494593.1_1_11:67352122-67352251:+|nuORF'] 65289 12513 LSEKLYLDMSK True NCI_RA007_Epitope_Rep5 1325.6900890089698 1325.68898993586 54.788 2 -0.6192535070909883 0.1807081038552321 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1', 'ENST00000477846.5_1_1:15707235-15714865:+|nuORF'] 31594 16941 GEFVDLYVP True NCI_RA007_Epitope_Rep4 1037.5069626135696 1037.50637496793 73.415 1 -0.6192598483134014 0.1807081038552321 1.0 ['ENSG00000171858|ENST00000343986|RPS21'] 16474 7463 EELSSAIFKH True NCI_RA007_Epitope_Rep2 1159.5873381925899 1159.58624993586 33.656 2 -0.619285904288697 0.1807081038552321 1.0 ['nc|ENSG00000196535|Q92614-3|MYO18A', 'nc|ENSG00000196535|Q92614-4|MYO18A', 'ENSG00000196535|ENST00000527372|MYO18A', 'nc|ENSG00000196535|Q92614-2|MYO18A', 'nc|ENSG00000196535|Q92614-5|MYO18A'] 30847 6825 GAQLSWLYKE True NCI_RA007_Epitope_Rep2 1193.6080736371703 1193.6069699358602 31.162 2 -0.6193274506011216 0.1807081038552321 1.0 ['ENSG00000178605|ENST00000326153|GTPBP6', 'ENST00000485332.7_1_X:221743-228403:-|nuORF'] 122422 21966 VGSITETLVQ True H1975_Epitope_Rep1 1045.5655401188499 1045.56444993586 91.371 2 -0.6194001611073939 0.1807367311293292 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 80691 12842 PLPVPPPTG True PC9_epitope_Rep3 873.49600400705 873.49490993586 54.417 2 -0.6194542101220345 0.18074677827954622 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 122947 11011 VGVYYCMQR True NCI_RA007_Epitope_Rep1 1117.5048715219298 1117.5042749679299 46.825 1 -0.6194941016816523 0.18074677827954622 1.0 ['nc|ENSG00000273962|A0A087WW87|IGKV2-40'] 26835 15240 FLENTGQLNKC True PC9_epitope_Rep3 1265.60742201417 1265.60578490379 63.768 3 -0.6196262344211367 0.18080402800723783 1.0 ['ENST00000342505.4_1_1:65349154-65432039:-|nuORF'] 19281 5437 ELLRHFWSCFP True NCI_RA007_Epitope_Rep2 1433.6914264216498 1433.68978490379 25.768 3 -0.6196735070483183 0.18080402800723783 1.0 ['nc|ENSG00000110768|P32780-2|GTF2H1', 'ENST00000418116.6_1_11:18344284-18382305:+|nuORF', 'ENSG00000110768|ENST00000265963|GTF2H1'] 49054 13851 KFLNLQNQHEK True H1975_Epitope_Rep3 1397.7415474182096 1397.7404499358602 58.586 2 -0.6197381659279522 0.18084838567562464 1.0 ['CCDC73|p.E339Q|2|0.39|ENSG00000186714|chr11:32642007-32642007|C/G|missense_variant'] 39246 12845 HLLDQVRGPFP True H1975_Epitope_Rep3 1277.6880552933699 1277.6869499358602 54.63 2 -0.6198209371795622 0.1808612741318816 1.0 ['ENST00000463653.1_1_2:241528810-241528954:+|nuORF'] 139468 21866 YTFTRRFI True PC9_epitope_Rep5 1102.59236400338 1102.59126993586 89.144 2 -0.619850105587677 0.18087131641466983 1.0 ['ENST00000335670.10_1_15:60784332-60784527:-|nuORF'] 57805 18003 LEPLHILSKL True PC9_epitope_Rep3 1161.7121447828902 1161.71050490379 74.453 3 -0.6198994846804589 0.18087131641466983 1.0 ['ENST00000587091.5_2_X:73751613-73751946:+|nuORF'] 47923 18943 IYWWILLCI True PC9_epitope_Rep5 1221.6620237863299 1221.6609299358602 77.888 2 -0.6199495781236851 0.1808970909834647 1.0 ['nc|ENSG00000144339|Q9UIK5-3|TMEFF2'] 125337 14691 VLSHLCCLP True PC9_epitope_Rep3 983.49324420907 983.49214993586 61.646 2 -0.6199570751293697 0.1808970909834647 1.0 ['ENST00000321599.8_2_3:49785594-49823893:-|nuORF', 'ENST00000395238.5_2_3:49775836-49823893:-|nuORF'] 70599 19724 LYYYRDRDWRW True NCI_RA007_Epitope_Rep2 1690.8004592766597 1690.79936993586 81.678 2 -0.6199851238526042 0.18092571033007143 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 64357 6811 LQNVQVPPP True H1975_Epitope_Rep3 990.5498304850599 990.54872993586 31.152 2 -0.6201067461079361 0.18095148197092695 1.0 ['ENST00000531236.1_1_11:71192815-71195619:+|nuORF'] 101211 10070 SLWALCTACRR True H1975_Epitope_Rep1 1278.63253164654 1278.63142993586 43.676 2 -0.620129552044662 0.18095148197092695 1.0 ['ENST00000489212.2_1_20:62368875-62369414:+|nuORF', 'ENST00000465591.1_1_20:62368003-62369414:+|nuORF', 'ENSG00000203896|ENST00000309546|LIME1'] 133881 8801 WMRQEQIRFK True NCI_RA007_Epitope_Rep1 1420.7397735963998 1420.7386699358601 38.236 2 -0.6201676047417303 0.18098009911114607 1.0 ['nc|ENSG00000054523|O60333-3|KIF1B'] 13463 9973 DPATQKLI True NCI_RA007_Epitope_Rep5 884.4967322830399 884.49562993586 45.003 2 -0.6202523135766732 0.18100586782450012 1.0 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000475782.1_1_3:51978808-51978934:+|nuORF'] 58723 9995 LFLDHKTLYY True NCI_RA007_Epitope_Rep1 1311.6863239578702 1311.6852299358602 42.883 2 -0.6202630215426825 0.18100586782450012 1.0 ['ENSG00000083168|ENST00000265713|KAT6A', 'ENST00000490365.1_1_10:76744849-76785012:+|nuORF', 'ENST00000444292.2_1_X:95228575-95229244:-|nuORF', 'nc|ENSG00000156650|Q8WYB5-3|KAT6B', 'nc|ENSG00000156650|Q8WYB5-2|KAT6B', 'ENSG00000156650|ENST00000287239|KAT6B', 'nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7', 'ENST00000513980.5_1_17:47892935-47904861:+|nuORF', 'ENST00000512616.5_1_17:47892935-47904861:+|nuORF', 'nc|ENSG00000136504|O95251-3|KAT7', 'nc|ENSG00000136504|O95251-5|KAT7', 'nc|ENSG00000136504|O95251-2|KAT7'] 137555 17534 YLRTRPLSV True PC9_epitope_Rep3 1103.64512785223 1103.64402993586 72.628 2 -0.6203252684293663 0.18101875157311856 1.0 ['ENST00000531791.1_1_11:65149642-65149978:-|nuORF'] 93361 23742 RRVETILE True PC9_epitope_Rep4 1014.5821932424999 1014.58108993586 99.699 2 -0.6203496522411301 0.18104451785433381 1.0 ['ENSG00000171695|ENST00000302096|LKAAEAR1'] 89932 13670 RFVEKYTEL True PC9_epitope_Rep5 1183.62372370131 1183.62262993586 57.607 2 -0.6203749823633842 0.18104451785433381 1.0 ['ENSG00000181610|ENST00000313608|MRPS23'] 23494 13658 EWDDDFSPD True NCI_RA007_Epitope_Rep3 1124.3934489829599 1124.39234993586 61.034 2 -0.6204429772280379 0.18107028251431448 1.0 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 131347 18583 VVRTRPGLQAP True H1975_Epitope_Rep2 1192.7040397106798 1192.70294993586 77.122 2 -0.6204655594530971 0.18107028251431448 1.0 ['COL11A2|p.P897Lfs*87|1|0.39|ENSG00000204248|chr6:33173394-33173394|G/-|frameshift_variant', 'nc|ENSG00000204248|P13942-9|COL11A2', 'nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'COL11A2|p.I1056Lfs*289|1|0.19|ENSG00000204248|chr6:33171560-33171560|G/-|frameshift_variant', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2'] 65547 4891 LSGDPQNLSD True PC9_epitope_Rep4 1044.47236801 1044.4712699358602 25.406 2 -0.6204954597370944 0.18108316423638965 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF'] 5617 6341 APAAVPDVEVR True PC9_epitope_Rep2 1122.6033226099 1122.60166490379 29.79 3 -0.6205691297328219 0.18111177525403466 1.0 ['ENST00000521696.1_1_8:100025101-100025236:-|nuORF'] 59825 11799 LHDLEWLK True NCI_RA007_Epitope_Rep4 1052.5654805492002 1052.5643899358602 52.361 2 -0.6207222657647895 0.18117184427841132 1.0 ['ENSG00000183742|ENST00000400331|MACC1'] 14910 19948 DYKGDATVFFI True PC9_epitope_Rep2 1274.6183039676998 1274.61720993586 82.129 2 -0.6207803517610471 0.1812004530011325 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 129117 13917 VTCPNHPDAI True PC9_epitope_Rep5 1065.49132963277 1065.49022993586 58.553 2 -0.6208617031628842 0.1812133318652972 1.0 ['ENST00000494819.5_1_1:89324456-89357188:-|nuORF', 'ENSG00000137947|ENST00000370500|GTF2B'] 16716 13199 EEVVEIEYV True PC9_epitope_Rep1 1107.53357128423 1107.53246993586 55.634 2 -0.6209302616663835 0.18128627376964093 1.0 ['ENSG00000138442|ENST00000261015|WDR12', 'ENST00000478869.1_1_2:203760778-203765795:-|nuORF'] 129601 14410 VTGQRLTI True PC9_epitope_Rep2 886.52361573722 886.52250993586 60.695 2 -0.6210063425758093 0.18128627376964093 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 23196 5611 EVPYFNYNAKP True NCI_RA007_Epitope_Rep1 1340.6401020414396 1340.63845490379 25.889 3 -0.6210336436430249 0.18129629920888315 1.0 ['ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 93066 2872 RRRKRKKRK True NCI_RA007_Epitope_Rep1 1310.8959718576996 1310.89432490379 14.995 3 -0.6210606991443292 0.18129629920888315 1.0 ['ENST00000308478.9_1_7:110731416-110762496:+|nuORF'] 12751 11440 DLGTAWETCPK True H1975_Epitope_Rep3 1219.5543238121497 1219.5532299358601 49.123 2 -0.6210787262963364 0.18130632401742605 1.0 ['ENST00000468090.5_1_21:45181320-45181410:+|nuORF'] 130305 25661 VTTISLLLLA True PC9_epitope_Rep1 1042.66379760814 1042.6627099358602 103.74 2 -0.6210916665889654 0.18130632401742605 1.0 ['ENST00000250457.7_1_14:34394881-34395019:-|nuORF'] 130096 16552 VTQSKWLI True PC9_epitope_Rep6 973.5596668927699 973.55856993586 76.107 2 -0.6211532370130343 0.18131634819532907 1.0 ['ENST00000301919.8_1_11:105878863-105879127:-|nuORF'] 47706 15845 IYPVMRWL True PC9_epitope_Rep6 1076.5841078188 1076.5830099358602 73.219 2 -0.6211632601047343 0.18131634819532907 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|193|1|anti-sense'] 4232 8010 AIFTKTFQ True NCI_RA007_Epitope_Rep5 954.51746772762 954.51636993586 37.503 2 -0.6212080925162411 0.18132922341395905 1.0 ['nc|ENSG00000138039|P22888-2|LHCGR', 'LHCGR|p.R647Qfs*3|2|0.3|ENSG00000138039|chr2:48687857-48687858|-/T|frameshift_variant', 'ENSG00000138039|ENST00000294954|LHCGR'] 111477 13813 TLLHYSFAF True PC9_epitope_Rep2 1097.5545815123298 1097.5534899358602 58.415 2 -0.6212269822317856 0.1813407136005535 1.0 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS', 'nc|ENSG00000163618|Q9ULU8-2|CADPS', 'nc|ENSG00000163618|Q9ULU8-3|CADPS', 'nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 36136 9427 GVESALHKYTL True PC9_epitope_Rep5 1216.6451874218799 1216.6435349037902 41.216 3 -0.6212836830392239 0.1813407136005535 1.0 ['ENST00000546954.1_1_12:120882345-120882465:-|nuORF'] 19779 9342 ELTEHLRLH True PC9_epitope_Rep5 1146.61455599994 1146.6129149037902 40.887 3 -0.6213098116372477 0.1813407136005535 1.0 ['ENSG00000204947|ENST00000378061|ZNF425'] 84433 22811 QGHTIPEYYY True H1975_Epitope_Rep3 1269.56660274801 1269.56494490379 95.309 3 -0.6213237399305541 0.1813407136005535 1.0 ['FAM217B|p.K137I|1|0.14|ENSG00000196227|chr20:59944353-59944353|A/T|missense_variant'] 87630 8222 QTVNQRLH True H1975_Epitope_Rep2 994.53082637598 994.52972993586 36.58 2 -0.6213250817392183 0.1813407136005535 1.0 ['ENST00000367362.7_2_1:200143539-200143707:+|nuORF'] 27347 17404 FMFFILLNMFL True PC9_epitope_Rep6 1434.7443735112995 1434.74272490379 79.559 3 -0.6213266091775128 0.1813407136005535 1.0 ['nc|ENSG00000118762|Q13563-5|PKD2', 'nc|ENSG00000118762|Q13563-3|PKD2', 'ENSG00000118762|ENST00000237596|PKD2'] 29428 11804 FVGAATVFGI True H1975_Epitope_Rep2 980.5331177917599 980.53202993586 50.48 2 -0.6213344805355712 0.1813407136005535 1.0 ['ENSG00000103569|ENST00000219919|AQP9'] 58594 20182 LFFAKNAP True PC9_epitope_Rep3 906.4963383602199 906.49524993586 82.886 2 -0.621416003564052 0.1814236520590594 1.0 ['ENST00000392491.2_6:123046798-123046876:+|nuORF'] 57117 14480 LEENVHEVL True PC9_epitope_Rep1 1080.54513902744 1080.5440499358601 60.523 2 -0.6214399228653689 0.1814236520590594 1.0 ['ENSG00000141002|ENST00000263346|TCF25', 'ENST00000570116.6_1_16:89971082-89977643:+|nuORF', 'ENST00000563484.1_1_16:89971421-89975542:+|nuORF'] 124187 11378 VLAEKFGDLDP True NCI_RA007_Epitope_Rep1 1202.6183039676998 1202.61720993586 48.23 2 -0.6214457319992436 0.1814236520590594 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 112150 20708 TLVFHAGFGV True PC9_epitope_Rep3 1046.5549158654999 1046.55380993586 84.929 2 -0.6214500877205671 0.1814236520590594 1.0 ['RARS1|p.R435L|1|0.39|ENSG00000113643|chr5:168506789-168506789|G/T|missense_variant'] 96015 14586 SEAGQVTISV True PC9_epitope_Rep2 989.50293986229 989.50184993586 61.373 2 -0.621466941719283 0.1814365231611057 1.0 ['MYOM3|p.T1417A|1|0.15|ENSG00000142661|chr1:24057429-24057429|T/C|missense_variant'] 48459 6993 KEELGKNIN True H1975_Epitope_Rep2 1043.56112344475 1043.56002993586 31.822 2 -0.6215383464248305 0.18144654088050313 1.0 ['HYOU1|p.E939Gfs*11|1|0.39|ENSG00000149428|chr11:119046582-119046583|-/C|frameshift_variant', 'HYOU1|p.L930Sfs*31|1|0.14|ENSG00000149428|chr11:119046610-119046610|G/-|frameshift_variant', 'ENSG00000149428|ENST00000617285|HYOU1', 'nc|ENSG00000149428|Q9Y4L1-2|HYOU1', 'ENST00000543287.5_1_11:118919950-118926831:-|nuORF', 'HYOU1-FOSL2|1|fusion'] 119911 10310 VEWMEDSWRQR True NCI_RA007_Epitope_Rep1 1520.6830465659198 1520.68194993586 44.099 2 -0.6215557564651316 0.18144654088050313 1.0 ['ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 78541 10706 PDLVNVIK True H1975_Epitope_Rep1 896.53311779176 896.53202993586 46.14 2 -0.6215720357108777 0.18145085214766368 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000493342.1_1_X:24745055-24752029:+|nuORF'] 33558 17776 GLKIGDTV True PC9_epitope_Rep2 801.45961849833 801.45852993586 73.664 2 -0.6216866992594035 0.18145085214766368 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 126172 12436 VPFTVTLISF True PC9_epitope_Rep5 1122.63249747986 1122.6308549037901 52.836 3 -0.6217095307508538 0.18145085214766368 1.0 ['nc|ENSG00000255374|P59539|TAS2R45'] 66172 12766 LSPGILMNAA True PC9_epitope_Rep5 985.52665251233 985.52554993586 54.112 2 -0.6217114812723809 0.18145085214766368 1.0 ['nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2'] 77955 4716 PALAGPPAH True PC9_epitope_Rep4 829.44463714053 829.44354993586 24.686 2 -0.6217480059243857 0.18146372140554987 1.0 ['ENSG00000139800|ENST00000267294|ZIC5'] 139569 12120 YTNIQETYF True PC9_epitope_Rep3 1177.52915461013 1177.52804993586 51.662 2 -0.6218316764316747 0.1814737371672929 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 140408 8006 YYFCRWYRNRK True NCI_RA007_Epitope_Rep2 1653.7986854548496 1653.79702490379 35.771 3 -0.6218582944788037 0.1814737371672929 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 63294 5055 LPAVKMAP True NCI_RA007_Epitope_Rep1 825.4782457679299 825.47714993586 23.747 2 -0.6219391749424481 0.18150232675135203 1.0 ['ENST00000361611.10_1_14:23504170-23504263:-|nuORF'] 103208 1274 SQRCMKRPRE True H1975_Epitope_Rep2 1289.6444933125697 1289.6428349037901 6.8944 3 -0.6219692261311704 0.18153091543649483 1.0 ['CLMN|p.K654Sfs*91|1|0.27|ENSG00000165959|chr14:95203388-95203388|T/-|frameshift_variant'] 78414 21041 PAWYEKLV True PC9_epitope_Rep2 1004.5331177917598 1004.53202993586 86.388 2 -0.621999670795799 0.18154378242414715 1.0 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 21995 9086 ESNNNYSI True H1975_Epitope_Rep2 939.3933894133099 939.39228993586 39.902 2 -0.6220566842678013 0.18154808689911026 1.0 ['ENSG00000136478|ENST00000584379|TEX2', 'nc|ENSG00000136478|Q8IWB9-2|TEX2'] 29618 22721 FVLLMALVV True PC9_epitope_Rep2 1003.6140109647498 1003.61290993586 92.892 2 -0.6220589979892853 0.18154808689911026 1.0 ['IFNA5|p.L3M|1|0.19|ENSG00000147873|chr9:21305250-21305250|A/T|missense_variant', 'ENSG00000147873|ENST00000610521|IFNA5'] 129028 10415 VTAEDLHLEKE True H1975_Epitope_Rep3 1282.6404959642598 1282.6393899358602 45.12 2 -0.6220684001495305 0.18154808689911026 1.0 ['ENST00000515156.2_1_5:68927792-68932223:+|nuORF'] 128651 19353 VSLLRLRL True H1975_Epitope_Rep2 968.64948495668 968.64838993586 80.324 2 -0.6220763082212637 0.18154808689911026 1.0 ['ENST00000590444.5_1_19:6471408-6475578:-|nuORF', 'nc|ENSG00000205744|Q8IV53-2|DENND1C', 'ENSG00000205744|ENST00000381480|DENND1C'] 85237 5750 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 30.283 3 -0.6221900485663314 0.18158953722334004 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 48187 7424 KAVQPHISP True PC9_epitope_Rep4 975.5501648382299 975.54906993586 35.906 2 -0.6221914012175531 0.18158953722334004 1.0 ['FOXK2-TBCD|1|fusion', 'ENST00000570585.1_1_17:80478172-80529779:+|nuORF', 'ENST00000527313.6_1_17:80477872-80529633:+|nuORF', 'FOXK2-TBCD|4|fusion', 'nc|ENSG00000141568|Q01167-3|FOXK2', 'ENSG00000141568|ENST00000335255|FOXK2', 'nc|ENSG00000141568|Q01167-2|FOXK2'] 62877 24555 LMRFRKPWPLR True PC9_epitope_Rep1 1498.8707281962998 1498.86907490379 99.311 3 -0.62221207508789 0.1815966928118958 1.0 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 19448 10882 ELPSGAEILE True PC9_epitope_Rep1 1056.5339056373998 1056.53280993586 46.742 2 -0.6222766486812182 0.1815966928118958 1.0 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN'] 137784 12851 YPADKISI True H1975_Epitope_Rep1 905.4858332461699 905.48472993586 54.5 2 -0.6222868400190145 0.1815966928118958 1.0 ['ENSG00000021776|ENST00000156471|AQR', 'ENST00000543879.6_1_15:35148995-35166226:-|nuORF'] 94213 6479 RWPHWSWCSRR True PC9_epitope_Rep3 1555.73675390463 1555.73509490379 29.947 3 -0.6223887445045236 0.18164099339830242 1.0 ['ENST00000397397.6_1_11:866620-867061:+|nuORF'] 85874 8405 QNIEILEDQIR True H1975_Epitope_Rep1 1369.7201432672898 1369.71904993586 37.257 2 -0.6224076051493469 0.18164814611068325 1.0 ['ENSG00000153347|ENST00000283357|FAM81B'] 81907 12553 PSLRQSLTL True PC9_epitope_Rep4 1013.58694426977 1013.58584993586 56.106 2 -0.622436717356341 0.18164814611068325 1.0 ['AluJb_dup56968|chr8:98045693-98046014:+|1.235187719160256|0.0002169198745066|12.48|502.0|23|3|anti-sense'] 7794 11853 ASVTPPGSL True PC9_epitope_Rep2 827.43888305375 827.43778993586 50.92 2 -0.6224512605186467 0.18164814611068325 1.0 ['nc|ENSG00000127191|Q12933-4|TRAF2', 'nc|ENSG00000127191|Q12933-3|TRAF2', 'TRAF2|p.S483Wfs*13|1|0.25|ENSG00000127191|chr9:136925843-136925852|CCTACGTGCG/-|frameshift_variant', 'ENSG00000127191|ENST00000247668|TRAF2', 'nc|ENSG00000127191|Q12933-2|TRAF2'] 12367 14539 DIYMWDFV True PC9_epitope_Rep4 1087.46846892987 1087.46736993586 63.838 2 -0.6224734772103432 0.1816610084244939 1.0 ['ENST00000586768.1_1_16:4574125-4574218:-|nuORF'] 55317 21090 LARRWARRP True PC9_epitope_Rep3 1180.7053771233598 1180.70428993586 86.406 2 -0.6226952433239363 0.1817367387033399 1.0 ['ENST00000518192.5_1_8:29953188-29953320:+|nuORF'] 113062 10806 TPVSMAGPYS True PC9_epitope_Rep5 1008.4586325221599 1008.4580749679301 46.555 1 -0.6228200676249365 0.18184390029233333 1.0 ['ENST00000371712.3_1_9:139323637-139324123:-|nuORF'] 57198 10819 LEEVELDER True H1975_Epitope_Rep3 1130.54553295026 1130.54442993586 46.694 2 -0.6229306542823954 0.18188819211969762 1.0 ['ENSG00000132003|ENST00000590508|ZSWIM4', 'nc|ENSG00000132003|Q9H7M6|ZSWIM4'] 137014 6379 YKLSVTTF True PC9_epitope_Rep4 957.51713337445 957.51602993586 31.623 2 -0.6229785638562947 0.18190818940453551 1.0 ['nc|ENSG00000151490|Q16827-5|PTPRO', 'nc|ENSG00000151490|Q16827-2|PTPRO', 'ENSG00000151490|ENST00000281171|PTPRO'] 24652 5054 FASKIRYLQEY True H1975_Epitope_Rep3 1416.74015043588 1416.73849490379 24.562 3 -0.622981577261569 0.18190818940453551 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79'] 51870 19450 KKPFSIEEV True PC9_epitope_Rep2 1075.5913609438699 1075.59077496793 80.195 1 -0.6229887583101884 0.18190818940453551 1.0 ['ENSG00000248144|ENST00000515683|ADH1C', 'ENSG00000187758|ENST00000209668|ADH1A'] 108273 7032 TEAREEAKP True PC9_epitope_Rep1 1029.5090878718897 1029.50798993586 31.855 2 -0.6229912078980201 0.18190818940453551 1.0 ['ENSG00000153208|ENST00000295408|MERTK'] 87669 12518 QVAVGVAVL True NCI_RA007_Epitope_Rep3 854.5225531080599 854.52144993586 56.47 2 -0.6231145007186888 0.18195961342028757 1.0 ['ENST00000463639.1_1_6:32946038-32946125:+|nuORF'] 119599 14744 VERRRRRGP True H1975_Epitope_Rep2 1180.7013543720798 1180.70024993586 61.873 2 -0.6231268463808135 0.18195961342028757 1.0 ['ENST00000230859.7_2_5:6713753-6713927:+|nuORF'] 19856 13152 ELVKSHSFY True H1975_Epitope_Rep2 1108.5553097883198 1108.5542099358602 55.711 2 -0.6231368172290884 0.18195961342028757 1.0 ['ENST00000428182.2_1_12:15408356-15408710:-|nuORF'] 31471 5794 GEEKTIQVP True NCI_RA007_Epitope_Rep4 999.5236753068699 999.52256993586 28.91 2 -0.6231527827830783 0.18195961342028757 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 46465 10788 ITNGTLTGV True PC9_epitope_Rep1 874.47599683846 874.47488993586 46.384 2 -0.6233205021659902 0.18201961154063737 1.0 ['nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-10|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-8|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-7|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-6|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-4|ADGRG2'] 15977 7410 EDWTLVETP True PC9_epitope_Rep6 1088.50260550912 1088.5015099358602 37.723 2 -0.6234358609293452 0.18209246047958766 1.0 ['nc|ENSG00000196091|Q00872-5|MYBPC1'] 123157 17054 VHFQDFGSL True PC9_epitope_Rep2 1048.4977949121999 1048.49668993586 70.85 2 -0.6234483764430165 0.18209246047958766 1.0 ['ENST00000558397.1_1_15:83205554-83206687:-|nuORF'] 13074 13386 DLRTFVNMK True PC9_epitope_Rep2 1122.5855643707798 1122.58390490379 56.77 3 -0.6234746893229565 0.1820938673538331 1.0 ['nc|ENSG00000167604|Q8NI38-3|NFKBID', 'nc|ENSG00000167604|Q8NI38|NFKBID', 'ENSG00000167604|ENST00000606253|NFKBID'] 5055 2700 ALLIRFWFK True NCI_RA007_Epitope_Rep2 1192.71208521324 1192.71043490379 14.728 3 -0.623479429192124 0.1820938673538331 1.0 ['ENST00000421826.6_2_6:27223302-27223911:+|nuORF'] 93495 20850 RSKKRKKIRRV True PC9_epitope_Rep6 1453.97936712849 1453.97826993586 92.972 2 -0.623479670490376 0.1820938673538331 1.0 ['ENST00000561144.1_1_15:60740147-60741119:-|nuORF'] 23015 3823 EVKARDREWKK True H1975_Epitope_Rep3 1443.7946456202296 1443.79300490379 19.804 3 -0.6234901469876332 0.1820938673538331 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENST00000590205.2_2_19:13370376-13370586:-|nuORF'] 4965 8951 ALIGGLPMPYP True H1975_Epitope_Rep3 1127.6049028330299 1127.60380993586 39.428 2 -0.6234948724534612 0.1820938673538331 1.0 ['nc|ENSG00000117751|Q12972-2|PPP1R8', 'ENSG00000117751|ENST00000311772|PPP1R8', 'nc|ENSG00000117751|Q12972-3|PPP1R8', 'ENST00000486634.2_1_1:28176630-28178160:+|nuORF'] 68672 10339 LVCFLLLP True PC9_epitope_Rep3 916.5455970517598 916.54448993586 44.713 2 -0.6235261840038483 0.1821138466856254 1.0 ['ENSG00000131183|ENST00000324417|SLC34A1'] 56030 20134 LDKKYAGLL True PC9_epitope_Rep3 1019.6015317047498 1019.60042993586 82.699 2 -0.6235439535157319 0.1821138466856254 1.0 ['ENSG00000007168|ENST00000397195|PAFAH1B1'] 38926 9069 HINTLARELLI True NCI_RA007_Epitope_Rep2 1291.76122023363 1291.75957490379 39.88 3 -0.6235484075653984 0.1821138466856254 1.0 ['ENST00000571240.1_1_17:7946036-7951880:+|nuORF', 'nc|ENSG00000179593|O15296-3|ALOX15B', 'ENSG00000179593|ENST00000380183|ALOX15B'] 63743 15971 LPRNAIEL True PC9_epitope_Rep4 924.5392658013599 924.53816993586 69.362 2 -0.6235653788615527 0.1821138466856254 1.0 ['FSHR|p.M492Ifs*32|1|0.35|ENSG00000170820|chr2:48963345-48963346|-/A|frameshift_variant', 'nc|ENSG00000170820|P23945-2|FSHR', 'nc|ENSG00000170820|P23945-3|FSHR', 'ENSG00000170820|ENST00000406846|FSHR', 'nc|ENSG00000170820|P23945-4|FSHR'] 85295 27555 QKVWKRWKKRY True PC9_epitope_Rep1 1604.9415846374395 1604.9399249037901 112.84 3 -0.6236256853066691 0.1821424082453494 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 41828 6977 IDSRVQEY True PC9_epitope_Rep2 1008.4876241513198 1008.48652993586 32.234 2 -0.6236392924497546 0.182155257741677 1.0 ['ENSG00000149346|ENST00000334534|SLX4IP'] 3031 10282 AFTKENLRAPG True PC9_epitope_Rep1 1202.64077074778 1202.6396699358602 44.435 2 -0.6237072404806435 0.18218381775333858 1.0 ['CON__ENSEMBL:ENSBTAP00000031900'] 5646 13737 APAGPALGL True PC9_epitope_Rep2 765.43848913093 765.43738993586 58.127 2 -0.623721823168608 0.1821966661953465 1.0 ['ENSG00000074356|ENST00000389005|NCBP3'] 84504 9156 QGSGASRDP True PC9_epitope_Rep1 873.39405811965 873.39296993586 40.07 2 -0.6237658473142766 0.18224093508452208 1.0 ['ENST00000349155.6_3_12:115121317-115121416:-|nuORF'] 60902 25895 LKRRKRIARRL True PC9_epitope_Rep1 1464.9953515457998 1464.99370490379 104.72 3 -0.6238035556218737 0.1823009127613781 1.0 ['nc|ENSG00000171320|Q56NI9-2|ESCO2', 'ENSG00000171320|ENST00000305188|ESCO2'] 17963 14340 EIFGKATSIDP True H1975_Epitope_Rep2 1176.60265390356 1176.60154993586 60.309 2 -0.6238272834832638 0.18232512841457094 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 58593 20227 LFFAKNAP True PC9_epitope_Rep1 906.4963383602199 906.49524993586 82.632 2 -0.6238443243686128 0.18232512841457094 1.0 ['ENST00000392491.2_6:123046798-123046876:+|nuORF'] 100389 18238 SLNPPPLPAP True PC9_epitope_Rep6 1001.55458151233 1001.55348993586 82.794 2 -0.6238466761720762 0.18232512841457094 1.0 ['ENST00000380599.8_1_17:7365097-7365262:-|nuORF'] 84304 8335 QFEKWWDK True NCI_RA007_Epitope_Rep1 1165.55564414149 1165.5545499358602 36.421 2 -0.6238600235313921 0.18232512841457094 1.0 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-4|SLC38A9', 'ENST00000515159.5_1_5:54931266-54960686:-|nuORF'] 82478 4473 PVDYKQSV True PC9_epitope_Rep2 934.47599683846 934.47488993586 22.566 2 -0.6238634304872528 0.18232512841457094 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17', 'SLC6A17|p.L509Cfs*48|1|0.4|ENSG00000197106|chr1:110195614-110195614|G/-|frameshift_variant'] 63900 7256 LPVRTTNKISK True NCI_RA007_Epitope_Rep3 1255.7612202336297 1255.76012993586 35.652 2 -0.6238901282639266 0.18232512841457094 1.0 ['ENSG00000185453|ENST00000614654|ZSWIM9', 'nc|ENSG00000185453|Q86XI8|ZSWIM9'] 108457 11930 TEELRISIY True H1975_Epitope_Rep3 1122.5920892198599 1122.59098993586 51.044 2 -0.6239081334857901 0.18232512841457094 1.0 ['ENST00000259486.10_1_8:120596034-120598489:-|nuORF'] 28003 14375 FQWIQYSI True PC9_epitope_Rep5 1083.53893144819 1083.5378299358601 60.293 2 -0.6239292966442821 0.18232512841457094 1.0 ['ENSG00000162769|ENST00000366971|FLVCR1'] 18867 9761 ELEKKDGAL True PC9_epitope_Rep5 1001.5393253710098 1001.53822993586 42.517 2 -0.6239398168933578 0.18233797241682637 1.0 ['ENST00000407982.6_1_9:125930502-125941310:-|nuORF'] 77977 15973 PALICLHPLFI True PC9_epitope_Rep5 1235.71003660791 1235.7089299358602 66.429 2 -0.6239692577874034 0.18238223143741264 1.0 ['ENST00000538185.1_1_11:61256765-61256957:+|nuORF'] 119113 5638 VEILANDQGNR True H1975_Epitope_Rep1 1227.6207635791898 1227.6196699358602 26.756 2 -0.6240442539291677 0.18242075833254798 1.0 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'HSPA6|p.Q139Pfs*16|1|0.21|ENSG00000173110|chr1:161525067-161525068|-/T|frameshift_variant'] 92581 14011 RRCLRRWFHFW True H1975_Epitope_Rep3 1661.86262312409 1661.86152993586 59.214 2 -0.6240543833377303 0.18242075833254798 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4'] 85296 27622 QKVWKRWKKRY True PC9_epitope_Rep1 1604.9415846374395 1604.9399249037901 113.18 3 -0.6240591856729979 0.18242075833254798 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 58145 10706 LESEWCLIPTV True NCI_RA007_Epitope_Rep3 1288.6373251601199 1288.63622993586 49.157 2 -0.6240771064901024 0.1824335998240847 1.0 ['ENST00000439384.5_3_7:29186332-29186525:+|nuORF'] 122124 7095 VGRGRHWQRE True PC9_epitope_Rep5 1279.6646345101901 1279.6635299358602 32.257 2 -0.6241068102624211 0.1824464409122322 1.0 ['ENST00000602829.1_1_19:46288739-46288805:-|nuORF'] 127794 16946 VRKRTAGI True NCI_RA007_Epitope_Rep2 899.5664836087099 899.56538993586 70.654 2 -0.624168534661164 0.18252210651965634 1.0 ['ENST00000523958.5_1_8:23291828-23307413:-|nuORF', 'nc|ENSG00000197217|Q9Y227-2|ENTPD4', 'ENSG00000197217|ENST00000358689|ENTPD4'] 120654 14772 VGALMISVPA True NCI_RA007_Epitope_Rep4 956.5364889200399 956.5353899358599 64.281 2 -0.6242308859049455 0.18261347573425474 1.0 ['nc|ENSG00000155256|Q5T4F4-4|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-8|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-2|ZFYVE27', 'ENSG00000155256|ENST00000684270|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-3|ZFYVE27'] 71040 2816 MESRPPPPP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 14.96 2 -0.6242603475016951 0.1826263133922822 1.0 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 63195 14170 LNVISPTRSL True PC9_epitope_Rep1 1098.63970811862 1098.6386099358601 59.328 2 -0.624287982182057 0.18265485613770574 1.0 ['ENST00000373768.3_1_9:124914566-124914674:-|nuORF'] 105551 11224 SVDQTVKI True PC9_epitope_Rep5 888.4916469025999 888.49054993586 48.163 2 -0.6243874843783314 0.1827119389389704 1.0 ['nc|ENSG00000134574|Q92466-4|DDB2', 'ENSG00000134574|ENST00000256996|DDB2'] 88148 12077 QWQRYQHQWQR True PC9_epitope_Rep2 1642.78654054802 1642.78544993586 51.766 2 -0.6244036463088165 0.1827119389389704 1.0 ['ENST00000577066.2_1_17:79004653-79005004:-|nuORF'] 22492 3560 ETIKYDGTDRR True NCI_RA007_Epitope_Rep2 1352.6684420475997 1352.6668049037899 18.496 3 -0.6244842823527045 0.18273760914630316 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 85297 27686 QKVWKRWKKRY True PC9_epitope_Rep1 1604.9415846374395 1604.9399249037901 113.52 3 -0.6244926860393267 0.18273760914630316 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 24140 17642 EYSNTRAYYF True PC9_epitope_Rep6 1312.5724164044398 1312.5713099358602 80.498 2 -0.6246589498172151 0.1827946857627438 1.0 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 31076 14747 GAWMRDCDI True PC9_epitope_Rep5 1065.43718588493 1065.43608993586 61.723 2 -0.6246811802918925 0.1827946857627438 1.0 ['ENSG00000142444|ENST00000270502|TIMM29'] 71163 11496 MEWCIWLMY True NCI_RA007_Epitope_Rep5 1273.53339476889 1273.53175490379 50.87 3 -0.6247098051607751 0.18281748088126756 1.0 ['ENST00000446859.5_1_3:169514113-169514143:-|nuORF'] 69202 17567 LVNAILPG True PC9_epitope_Rep5 795.48543932335 795.48434993586 72.579 2 -0.6247280277563417 0.18281748088126756 1.0 ['TDRD6|p.I1712Vfs*5|1|0.1|ENSG00000180113|chr6:46693262-46693290|ATTGACTCAGAGATAAAGCAGACTCTTGG/-|frameshift_variant', 'nc|ENSG00000180113|O60522-2|TDRD6', 'ENSG00000180113|ENST00000316081|TDRD6'] 56308 14479 LDQYHLYL True PC9_epitope_Rep4 1063.5338460677501 1063.53274993586 63.603 2 -0.6247415389700467 0.18281748088126756 1.0 ['ENSG00000142197|ENST00000691173|DOP1B', 'nc|ENSG00000142197|Q9Y3R5-2|DOP1B'] 128645 19159 VSLLKKTDP True PC9_epitope_Rep5 999.5964463243099 999.59534993586 78.732 2 -0.6247766942016642 0.18281882988411896 1.0 ['nc|ENSG00000115159|P43304-2|GPD2', 'ENSG00000115159|ENST00000438166|GPD2', 'GPD2|p.V249L|1|0.45|ENSG00000115159|chr2:156549691-156549691|G/C|missense_variant'] 129230 3666 VTDLQNETQTK True NCI_RA007_Epitope_Rep2 1275.63065955655 1275.62902490379 18.908 3 -0.6247786182851637 0.18281882988411896 1.0 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'ENST00000588559.5_1_19:55705613-55720813:-|nuORF', 'nc|ENSG00000080031|Q9HD43-3|PTPRH', 'PTPRH|p.H592Tfs*61|1|0.13|ENSG00000080031|chr19:55197333-55197333|G/-|frameshift_variant'] 119594 13011 VERRELLP True PC9_epitope_Rep6 1010.5872786229398 1010.58618993586 61.628 2 -0.6247992783539547 0.18281882988411896 1.0 ['nc|ENSG00000158813|Q92838-9|EDA', 'nc|ENSG00000158813|Q92838-3|EDA', 'ENSG00000158813|ENST00000374552|EDA', 'nc|ENSG00000158813|Q92838-2|EDA', 'nc|ENSG00000158813|Q92838-6|EDA', 'nc|ENSG00000158813|Q92838-8|EDA', 'nc|ENSG00000158813|Q92838-5|EDA', 'ENST00000502251.5_1_X:68836137-68840769:+|nuORF', 'nc|ENSG00000158813|Q92838-7|EDA', 'ENST00000374548.5_1_X:68836137-69177014:+|nuORF'] 82091 5513 PSYSSRTPG True PC9_epitope_Rep4 950.4457593393399 950.44466993586 27.965 2 -0.6248031273588885 0.18281882988411896 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'nc|ENSG00000078018|P11137-2|MAP2', 'nc|ENSG00000078018|P11137-4|MAP2'] 73196 8524 NEERREYR True H1975_Epitope_Rep1 1150.5479329920997 1150.5468299358602 37.716 2 -0.6248384097716109 0.18281882988411896 1.0 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 18150 5647 EINSRKIHGEK True NCI_RA007_Epitope_Rep2 1309.7102472899298 1309.70860490379 26.58 3 -0.6248649901946104 0.18283166109253066 1.0 ['nc|ENSG00000058668|P23634-5|ATP2B4', 'nc|ENSG00000058668|P23634-4|ATP2B4', 'nc|ENSG00000058668|P23634-3|ATP2B4', 'nc|ENSG00000058668|P23634-2|ATP2B4', 'nc|ENSG00000058668|P23634-7|ATP2B4', 'ENSG00000058668|ENST00000357681|ATP2B4', 'nc|ENSG00000058668|P23634-8|ATP2B4', 'nc|ENSG00000058668|P23634|ATP2B4'] 32212 17388 GFGFVTFDD True NCI_RA007_Epitope_Rep4 1003.4287122928699 1003.4281749679301 75.297 1 -0.6248953767067654 0.18284870941405515 1.0 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 49044 9948 KFLEFKKSKEE True PC9_epitope_Rep2 1411.7711162109902 1411.7700099358601 43.594 2 -0.6249289085589171 0.18284870941405515 1.0 ['ENSG00000177409|ENST00000318238|SAMD9L'] 118519 7361 VDTAILEDAGA True H1975_Epitope_Rep2 1073.52406922969 1073.5229699358601 33.254 2 -0.6249363659041899 0.18284870941405515 1.0 ['ENSG00000197774|ENST00000568449|EME2', 'ENST00000570069.5_1_16:1823417-1825633:+|nuORF'] 100170 8275 SLLETDSMDP True NCI_RA007_Epitope_Rep1 1106.48015581238 1106.47904993586 36.188 2 -0.6249454923330151 0.18284870941405515 1.0 ['FGF19|p.P191L|1|0.16|ENSG00000162344|chr11:69699341-69699341|G/A|missense_variant'] 55022 11937 LALAGTAF True PC9_epitope_Rep4 762.42759009406 762.42648993586 53.706 2 -0.6249773694949302 0.18284870941405515 1.0 ['ENST00000476918.1_1_3:193854169-193854699:+|nuORF'] 85543 12290 QLLCSMRWRTW True NCI_RA007_Epitope_Rep2 1478.7274946605398 1478.7263899358602 52.407 2 -0.6250326441220769 0.18289293956949743 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 113907 14036 TRIGLETSL True PC9_epitope_Rep2 988.55530978832 988.55420993586 59.268 2 -0.6251014797358203 0.18295286840204728 1.0 ['ENSG00000183207|ENST00000595090|RUVBL2', 'nc|ENSG00000183207|Q9Y230-2|RUVBL2', 'ENST00000596247.5_1_19:49507512-49519096:+|nuORF'] 133622 551 WKERILKAK True PC9_epitope_Rep1 1170.7237125260997 1170.7220549037902 3.0591 3 -0.6251354709150257 0.18298139571394928 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 7568 5732 ASGEPVSVP True H1975_Epitope_Rep3 841.41814760917 841.41704993586 27.076 2 -0.6251929533647932 0.1830413212760613 1.0 ['ENSG00000196208|ENST00000381486|GREB1', 'nc|ENSG00000196208|Q4ZG55-3|GREB1', 'nc|ENSG00000196208|Q4ZG55-2|GREB1'] 19597 11143 ELRKAPSAV True PC9_epitope_Rep3 969.5607295219298 969.55962993586 47.86 2 -0.6252353784201812 0.18308554563009247 1.0 ['ENST00000461448.5_1_1:28908107-28908347:-|nuORF'] 3705 6841 AGSFKMFSH True PC9_epitope_Rep1 1010.46438660894 1010.46328993586 31.119 2 -0.6252633389901419 0.18311119483822352 1.0 ['ENST00000492662.1_1_3:33414533-33415354:+|nuORF'] 45406 5134 ISDRRICAS True H1975_Epitope_Rep3 1019.5182130869499 1019.51710993586 24.852 2 -0.6252771606924669 0.18311119483822352 1.0 ['ENSG00000147113|ENST00000398000|DIPK2B', 'nc|ENSG00000147113|Q9H7Y0-2|DIPK2B'] 66940 22446 LSYLLNFFWDH True PC9_epitope_Rep3 1453.70303665117 1453.70192993586 91.615 2 -0.6253070341685943 0.18312401883830456 1.0 ['SLC9A8|p.R408W|1|0.33|ENSG00000197818|chr20:49880987-49880987|C/T|missense_variant'] 74447 4555 NIYRLVTK True NCI_RA007_Epitope_Rep5 1005.5971150306499 1005.59600993586 24.18 2 -0.6253244589253206 0.18314966563059246 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 127652 16708 VRELRGLG True NCI_RA007_Epitope_Rep3 898.5348491272598 898.53374993586 73.538 2 -0.6253262696157957 0.18314966563059246 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 61930 15482 LLLLRGFQP True PC9_epitope_Rep1 1055.64915060351 1055.6480499358602 64.372 2 -0.6254032969404046 0.18320958196631243 1.0 ['HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant'] 8327 19925 ATLPAVVTV True PC9_epitope_Rep3 869.52221875489 869.52112993586 81.883 2 -0.6254430316275577 0.18321665149279504 1.0 ['ENST00000580601.5_1_17:73689468-73702598:+|nuORF', 'nc|ENSG00000161526|Q9UHR5-2|SAP30BP', 'ENSG00000161526|ENST00000584667|SAP30BP', 'ENST00000579005.1_1_17:73702284-73702598:+|nuORF', 'ENST00000584557.1_1_17:73702349-73702598:+|nuORF', 'ENST00000580322.5_1_17:73702024-73702598:+|nuORF', 'ENST00000293208.13_1_17:73701692-73702598:+|nuORF', 'ENST00000583329.5_1_17:73699767-73702598:+|nuORF', 'ENST00000578756.5_1_17:73699860-73702598:+|nuORF'] 139623 12032 YTRQERYRARP True PC9_epitope_Rep3 1494.7803925384198 1494.77875490379 51.314 3 -0.625444302516215 0.18321665149279504 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 136095 10651 YGDTLAAI True H1975_Epitope_Rep1 822.4123339527399 822.4117849679301 45.926 1 -0.6254648767821823 0.18321665149279504 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 82612 18227 PVKQPPPLAP True PC9_epitope_Rep6 1042.61751612206 1042.61640993586 82.752 2 -0.6255120519127244 0.18322659634582783 1.0 ['nc|ENSG00000137693|P46937-4|YAP1', 'nc|ENSG00000137693|P46937-5|YAP1', 'nc|ENSG00000137693|P46937-3|YAP1', 'nc|ENSG00000137693|P46937-6|YAP1', 'nc|ENSG00000137693|P46937-7|YAP1', 'nc|ENSG00000137693|P46937-2|YAP1', 'nc|ENSG00000137693|P46937-8|YAP1', 'ENSG00000137693|ENST00000282441|YAP1', 'nc|ENSG00000137693|P46937-9|YAP1'] 101278 19411 SLWSLLVTL True PC9_epitope_Rep3 1030.60628273202 1030.6051899358602 79.89 2 -0.6255254832718599 0.18322659634582783 1.0 ['ENSG00000145248|ENST00000273861|SLC10A4'] 33560 17063 GLKIGDTV True PC9_epitope_Rep4 801.45961849833 801.45852993586 73.63 2 -0.6256353193676428 0.1832708094617715 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 12211 10794 DIPCRTVTP True PC9_epitope_Rep2 1000.5011660404799 1000.50006993586 46.837 2 -0.6258905276631163 0.18335059798474432 1.0 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 59418 12282 LGLTDHAEL True PC9_epitope_Rep4 967.49746055903 967.49636993586 55.059 2 -0.6259060694243513 0.18335059798474432 1.0 ['OR5J2|p.L163Ffs*8|1|0.3|ENSG00000174957|chr11:56177103-56177104|-/T|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 750 7322 AAVRETHKRVP True H1975_Epitope_Rep3 1262.7207524039798 1262.7190949037902 33.139 3 -0.6259075325763179 0.18335059798474432 1.0 ['NAP1L3|p.D474Vfs*2|1|0.32|ENSG00000186310|chrX:93671884-93671885|-/A|frameshift_variant', 'ENSG00000186310|ENST00000373079|NAP1L3'] 13822 18484 DQVSDVCNSP True NCI_RA007_Epitope_Rep4 1062.42878894586 1062.4282749679298 80.005 1 -0.6259088092417461 0.18335059798474432 1.0 ['nc|ENSG00000134265|Q99747-2|NAPG', 'ENSG00000134265|ENST00000322897|NAPG'] 10731 13286 CVLMAWALYL True PC9_epitope_Rep2 1181.59770927761 1181.59606490379 56.381 3 -0.6259580049971929 0.18335059798474432 1.0 ['nc|ENSG00000132185|Q7L513-4|FCRLA', 'nc|ENSG00000132185|Q7L513-11|FCRLA', 'nc|ENSG00000132185|Q7L513-5|FCRLA', 'nc|ENSG00000132185|Q7L513-14|FCRLA', 'nc|ENSG00000132185|Q7L513-3|FCRLA', 'nc|ENSG00000132185|Q7L513-12|FCRLA', 'ENSG00000132185|ENST00000236938|FCRLA', 'nc|ENSG00000132185|Q7L513-2|FCRLA', 'nc|ENSG00000132185|Q7L513-9|FCRLA', 'nc|ENSG00000132185|Q7L513-10|FCRLA', 'nc|ENSG00000132185|Q7L513-7|FCRLA', 'nc|ENSG00000132185|Q7L513-15|FCRLA', 'nc|ENSG00000132185|Q7L513-6|FCRLA', 'nc|ENSG00000132185|Q7L513-13|FCRLA', 'nc|ENSG00000132185|Q7L513-8|FCRLA'] 62754 12049 LMAEGGMTAVV True NCI_RA007_Epitope_Rep3 1077.51985287973 1077.5187499358601 54.517 2 -0.6259915862809806 0.18336341520834967 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1'] 105257 5662 STSRQFVDGP True H1975_Epitope_Rep3 1092.5199869087598 1092.5188899358602 26.808 2 -0.6260024218891496 0.1833762320296315 1.0 ['ENSG00000161800|ENST00000312377|RACGAP1', 'RACGAP1|p.D413Mfs*10|1|0.34|ENSG00000161800|chr12:49994233-49994233|C/-|frameshift_variant', 'ENST00000548158.1_1_12:50393384-50398020:-|nuORF'] 33326 18856 GLDQSLVSL True PC9_epitope_Rep4 930.5022115863 930.50110993586 80.616 2 -0.6260756208168694 0.18342043724594692 1.0 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1'] 113064 11099 TPVTNNVT True PC9_epitope_Rep3 844.4290466460401 844.4279499358599 47.689 2 -0.6261273531677387 0.18344894692237673 1.0 ['ENST00000265198.8_1_6:154476969-154477143:-|nuORF'] 129503 14308 VTFDDHDPV True PC9_epitope_Rep2 1043.45598966987 1043.4548899358601 60.3 2 -0.6261707664093348 0.18349314961000643 1.0 ['HNRNPA2B1-SKAP2|2|fusion', 'HNRNPA2B1-SKAP2|1|fusion', 'nc|ENSG00000122566|P22626|HNRNPA2B1', 'ENSG00000122566|ENST00000618183|HNRNPA2B1', 'ENST00000463181.5_1_7:26232138-26237376:-|nuORF'] 34132 5294 GPAVGDAPAP True H1975_Epitope_Rep2 850.4184819623399 850.41738993586 25.419 2 -0.6262025454761585 0.18352165725047082 1.0 ['ENSG00000105514|ENST00000222120|RAB3D'] 41223 11617 IADSIELE True PC9_epitope_Rep1 888.44402800384 888.44292993586 49.563 2 -0.6262334409000522 0.18353447058269645 1.0 ['ENSG00000171241|ENST00000303383|SHCBP1'] 66518 6495 LSSECEHGYAS True H1975_Epitope_Rep3 1181.4659027305702 1181.46480993586 29.953 2 -0.6263513076238973 0.1835729081664679 1.0 ['ENST00000485566.1_1_10:111987858-112005573:+|nuORF'] 130164 19060 VTRRRQLF True NCI_RA007_Epitope_Rep5 1074.6410455313 1074.6399499358602 80.179 2 -0.6263676606214402 0.1835729081664679 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 12696 16450 DLFGVKGG True PC9_epitope_Rep4 791.4177536863499 791.41664993586 71.243 2 -0.6263715026485996 0.1835729081664679 1.0 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 1982 13618 AEKEKTLY True H1975_Epitope_Rep2 980.51786165044 980.51676993586 57.519 2 -0.6264278313585081 0.18358283902959546 1.0 ['ENST00000337198.9_1_8:103870367-103876119:-|nuORF'] 34350 12343 GPSLSIPTEQL True H1975_Epitope_Rep2 1140.60265390356 1140.60154993586 52.562 2 -0.6264344952557123 0.18358283902959546 1.0 ['ENST00000264025.7_1_11:119533025-119533118:-|nuORF'] 100804 13498 SLRSSTPEI True PC9_epitope_Rep2 988.5189242796 988.51782993586 57.207 2 -0.6265179198756444 0.1835956501953646 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 5917 5562 APHPGLSEA True PC9_epitope_Rep5 877.42938099921 877.42828993586 26.399 2 -0.6265841822597855 0.1836369627642047 1.0 ['nc|ENSG00000071564|P15923-3|TCF3', 'nc|ENSG00000071564|P15923-2|TCF3', 'ENSG00000071564|ENST00000262965|TCF3'] 20046 7441 ENAVTAVR True H1975_Epitope_Rep3 858.4559301002199 858.4553849679301 33.6 1 -0.6266034802926974 0.1836369627642047 1.0 ['C5AR2|p.I203V|2|0.15|ENSG00000134830|chr19:47341406-47341406|A/G|missense_variant'] 81303 8648 PPQPPPPPP True PC9_epitope_Rep3 922.4912529797799 922.49014993586 38.216 2 -0.6266328501511043 0.18364977247764006 1.0 ['HOXD3|p.Q115K|1|0.11|ENSG00000128652|chr2:176169457-176169457|C/A|missense_variant', 'ENSG00000077044|ENST00000264057|DGKD', 'nc|ENSG00000168066|Q15637-5|SF1', 'MARCHF11|p.R187Dfs*15|1|0.2|ENSG00000183654|chr5:16177860-16177860|G/-|frameshift_variant', 'ENSG00000183654|ENST00000332432|MARCHF11', 'ENST00000372441.1_1_6:43477335-43478064:-|nuORF', 'ENSG00000165556|ENST00000381020|CDX2', 'nc|ENSG00000288658|A0A7I2V3R4|RNF228', 'nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF', 'ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant', 'ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000128652|ENST00000683222|HOXD3', 'DGKD-ATG16L1|2|fusion', 'ENSG00000181240|ENST00000321510|SLC25A41', 'ENST00000519758.5_1_X:47078159-47081683:+|nuORF', 'nc|ENSG00000196814|Q9H7P6-2|MVB12B', 'nc|ENSG00000181240|Q8N5S1-2|SLC25A41', 'ENSG00000196814|ENST00000361171|MVB12B', 'ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'nc|ENSG00000131061|Q9BYN7-2|ZNF341', 'ENSG00000131061|ENST00000375200|ZNF341'] 127654 17625 VRELRGLG True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 74.577 2 -0.626636045269372 0.18365681828879857 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 42320 19486 IEKWESLEVL True PC9_epitope_Rep6 1244.66525416012 1244.66414993586 87.615 2 -0.6266503214722079 0.18365681828879857 1.0 ['ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 121465 15878 VGITSGFWIW True PC9_epitope_Rep3 1164.59678067748 1164.59512490379 66.223 3 -0.62669123375059 0.18365681828879857 1.0 ['ENSG00000157240|ENST00000287934|FZD1', 'ENSG00000180340|ENST00000315323|FZD2'] 36233 10442 GVGEGAFK True H1975_Epitope_Rep3 763.38645355807 763.3859049679301 45.225 1 -0.6268105223262843 0.1837138150152977 1.0 ['ENST00000399138.4_1_17:18112786-18112837:+|nuORF'] 42008 12153 IEDQHRNP True H1975_Epitope_Rep2 1007.4784564499499 1007.47734993586 51.831 2 -0.6268225822079113 0.1837138150152977 1.0 ['ENSG00000198342|ENST00000242804|ZNF442', 'nc|ENSG00000198342|Q9H7R0-2|ZNF442', 'ENST00000462995.1_19:12462822-12476430:-|nuORF'] 54840 10068 LAGAKVER True H1975_Epitope_Rep3 842.4974009893799 842.49630993586 43.765 2 -0.6268688365977593 0.18373942921693837 1.0 ['ENSG00000110395|ENST00000264033|CBL'] 94089 9083 RVWKMGCLGPV True H1975_Epitope_Rep1 1244.6522044619599 1244.6511099358602 39.842 2 -0.6269125213697997 0.18373942921693837 1.0 ['ENST00000264538.3_1_3:107941042-107941165:-|nuORF'] 63031 18873 LNILQNEGF True PC9_epitope_Rep5 1046.53965972418 1046.53856993586 77.614 2 -0.6271236131172118 0.18379641977439246 1.0 ['ENST00000226067.9_1_17:53342389-53342698:+|nuORF'] 85498 11997 QLIKEHDLF True PC9_epitope_Rep2 1141.6131590176099 1141.61206993586 51.464 2 -0.627166424545403 0.18379641977439246 1.0 ['ATP11B|p.E480Q|1|0.05|ENSG00000058063|chr3:182865693-182865693|G/C|missense_variant'] 20589 6906 EQELFEPNQ True H1975_Epitope_Rep3 1132.5036681382799 1132.50256993586 31.524 2 -0.6272604067959813 0.1838249137119548 1.0 ['nc|ENSG00000168781|Q6PFW1-7|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-4|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-3|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-2|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1|PPIP5K1', 'ENSG00000168781|ENST00000420765|PPIP5K1'] 126536 20296 VPPASSLL True PC9_epitope_Rep5 782.4538048419 782.45270993586 83.119 2 -0.6273026795498783 0.18386909524481887 1.0 ['ENST00000456295.2_1_11:83344252-83393255:-|nuORF'] 124748 8353 VLKKKKKKKK True PC9_epitope_Rep4 1254.92274668582 1254.9211049037901 39.587 3 -0.6273287337776253 0.18389758714819116 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 140525 19851 YYKDQFSLL True PC9_epitope_Rep5 1175.58627556343 1175.5851699358602 81.406 2 -0.6273550897149187 0.18390750502008033 1.0 ['ENSG00000258890|ENST00000556440|CEP95', 'nc|ENSG00000258890|Q96GE4-2|CEP95', 'ENST00000581885.1_1_17:62532731-62533407:+|nuORF', 'ENST00000553956.6_1_17:62527116-62533894:+|nuORF'] 70252 17055 LYNDRMFRI True PC9_epitope_Rep1 1226.62301250866 1226.6213549037902 70.427 3 -0.627362546668463 0.18390750502008033 1.0 ['ENST00000518876.1_1_8:97243285-97244208:-|nuORF', 'ENST00000519322.1_1_8:97243965-97247767:-|nuORF', 'ENSG00000156467|ENST00000287022|UQCRB', 'nc|ENSG00000156467|P14927-2|UQCRB'] 85099 20576 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 85.236 3 -0.6273823680203454 0.18392030747509608 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 83448 5679 QDCFLCGFR True PC9_epitope_Rep1 1087.4579213295099 1087.45682993586 26.667 2 -0.6274129159644201 0.183933109528441 1.0 ['ENST00000297954.8_1_9:96070838-96080353:+|nuORF'] 46609 19935 ITSYFVLFA True PC9_epitope_Rep1 1059.5640835668698 1059.56298993586 81.5 2 -0.6274684306371032 0.18394591118013398 1.0 ['ENST00000416428.1_9:69204965-69205142:-|nuORF'] 93023 18497 RRRGGWAL True NCI_RA007_Epitope_Rep3 970.5573159073398 970.55620993586 80.941 2 -0.6275105760194306 0.1839558267580668 1.0 ['ENST00000495071.6_1_13:37633718-37633817:-|nuORF'] 39151 9551 HLEKKIPFKI True NCI_RA007_Epitope_Rep5 1251.7703283653498 1251.76867490379 43.375 3 -0.6275126532581473 0.1839558267580668 1.0 ['Tigger1_dup3188|chr4:76920080-76921080:-|1.2529691912903969|0.285655789289939|2.13|501.0|35|3|sense'] 124927 14504 VLLVAAAA True NCI_RA007_Epitope_Rep4 726.46397560278 726.4634249679301 63.151 1 -0.627608069641686 0.1839942276320743 1.0 ['ENST00000302014.10_1_5:140012494-140012747:-|nuORF'] 342 5889 AAKCYFLRKAK True NCI_RA007_Epitope_Rep5 1297.73289731081 1297.73125490379 29.34 3 -0.6276251270372392 0.1839942276320743 1.0 ['nc|ENSG00000261371|P16284-5|PECAM1', 'nc|ENSG00000261371|P16284-3|PECAM1', 'nc|ENSG00000261371|P16284-4|PECAM1', 'nc|ENSG00000261371|P16284-2|PECAM1', 'nc|ENSG00000261371|P16284-6|PECAM1', 'ENSG00000261371|ENST00000563924|PECAM1'] 48486 8557 KEFDGKSLVSV True NCI_RA007_Epitope_Rep4 1207.6448530687098 1207.6437499358601 39.701 2 -0.627648379679939 0.1839942276320743 1.0 ['ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'ENST00000505987.1_1_4:88814417-88815164:+|nuORF', 'ENST00000517330.1_1_5:77337712-77337985:-|nuORF', 'nc|ENSG00000205940|Q58FF8|HSP90AB2P'] 26670 12565 FLCFRLFLL True PC9_epitope_Rep6 1170.6623581395 1170.6607049037902 59.775 3 -0.6277036388271062 0.1840227126566593 1.0 ['ENST00000404072.7_1_22:38453228-38453788:+|nuORF'] 79397 6660 PGLRPSHPP True PC9_epitope_Rep1 956.5191990631199 956.51810993586 30.422 2 -0.6278165853332865 0.1840982526586567 1.0 ['ENSG00000133246|ENST00000423345|PRAM1'] 16135 7640 EEEKEQDEDEY True NCI_RA007_Epitope_Rep5 1441.5368783110098 1441.53578993586 36.091 2 -0.6278582685819145 0.18409949967847677 1.0 ['ENST00000473067.1_1_2:37315561-37321362:+|nuORF', 'nc|ENSG00000152133|Q8N954-2|GPATCH11', 'ENSG00000152133|ENST00000674370|GPATCH11', 'nc|ENSG00000152133|Q8N954|GPATCH11'] 101254 11619 SLWLHETERV True H1975_Epitope_Rep1 1268.6513354314802 1268.6502299358601 49.682 2 -0.6278653436901398 0.18409949967847677 1.0 ['DNAH17|p.R2682S|1|0.18|ENSG00000187775|chr17:78476682-78476682|G/T|missense_variant'] 23858 13728 EYLYRYFTDER True H1975_Epitope_Rep1 1553.7150578868498 1553.7139699358602 57.944 2 -0.6278691504738998 0.18409949967847677 1.0 ['NLRP1|p.F490L|1|0.26|ENSG00000091592|chr17:5559226-5559226|G/C|missense_variant'] 9605 16933 AYEQNKLSL True PC9_epitope_Rep6 1064.55022440788 1064.54912993586 77.676 2 -0.6278784507098847 0.18409949967847677 1.0 ['ENSG00000142207|ENST00000382751|URB1'] 93316 10576 RRSARWPWPER True H1975_Epitope_Rep2 1495.7908976524698 1495.78924490379 45.703 3 -0.6278872766949357 0.18409949967847677 1.0 ['HTR1A|p.V295Cfs*50|2|0.23|ENSG00000178394|chr5:63960837-63960837|C/-|frameshift_variant'] 27606 9578 FPSPKPIP True H1975_Epitope_Rep3 881.5010893874899 881.49998993586 41.853 2 -0.628026263250514 0.18418493773721026 1.0 ['nc|ENSG00000226266|Q9UIF8-4|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-2|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-5|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-3|BAZ2B', 'ENSG00000123636|ENST00000392783|BAZ2B'] 117783 19620 VALRSRAG True PC9_epitope_Rep2 828.4929843152798 828.49188993586 80.853 2 -0.6280423232442238 0.18418493773721026 1.0 ['ENST00000312838.8_1_16:88763521-88763863:-|nuORF'] 17073 7685 EGQALQEPW True H1975_Epitope_Rep2 1056.48762415132 1056.48652993586 34.512 2 -0.6280448207689892 0.18418493773721026 1.0 ['ENSG00000074771|ENST00000159060|NOX3'] 100053 6042 SLKMYQEEIQR True NCI_RA007_Epitope_Rep2 1423.71294971187 1423.71130490379 28.107 3 -0.628088857939175 0.18421341530354593 1.0 ['ENST00000546787.1_1_12:113730842-113731967:+|nuORF'] 78308 19041 PASLKEEV True PC9_epitope_Rep2 871.46509780159 871.46400993586 78.607 2 -0.6281023212231719 0.1842262091462267 1.0 ['ENSG00000100345|ENST00000216181|MYH9'] 12675 17724 DLERLWQRHTF True PC9_epitope_Rep4 1499.7633454919498 1499.76169490379 76.199 3 -0.6281418608501779 0.1842361132892137 1.0 ['ENSG00000236980|ENST00000545770|C3orf84'] 30984 10755 GATGKEWHP True PC9_epitope_Rep1 981.4668291370899 981.4657299358599 46.257 2 -0.6281529409278656 0.1842361132892137 1.0 ['ENST00000289081.7_1_9:97861636-97862104:-|nuORF'] 44778 6700 IPTIIRRDDP True H1975_Epitope_Rep1 1194.67207087606 1194.67096993586 30.817 2 -0.628260230318215 0.18429306235102247 1.0 ['nc|ENSG00000165802|Q6X4W1-4|NSMF', 'nc|ENSG00000165802|Q6X4W1-6|NSMF', 'nc|ENSG00000165802|Q6X4W1-3|NSMF', 'nc|ENSG00000165802|Q6X4W1-2|NSMF', 'ENSG00000165802|ENST00000371475|NSMF', 'ENST00000371468.1_2_9:140347082-140348912:-|nuORF', 'ENST00000371482.5_2_9:140343848-140347544:-|nuORF'] 135738 23759 YEKKPKKQKRR True PC9_epitope_Rep3 1487.9048647755496 1487.90320490379 96.673 3 -0.6282682706162985 0.18429306235102247 1.0 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF'] 12020 16373 DIDATTTETY True H1975_Epitope_Rep1 1128.48226398736 1128.4811699358602 68.337 2 -0.6282986465602848 0.18430585394157037 1.0 ['ENSG00000149596|ENST00000372980|JPH2', 'JPH3|p.D278N|1|0.15|ENSG00000154118|chr16:87644707-87644707|G/A|missense_variant', 'ENSG00000154118|ENST00000284262|JPH3'] 101840 9731 SPIRVTSP True PC9_epitope_Rep1 855.48141657207 855.48030993586 42.288 2 -0.6284208087098452 0.18434422630621589 1.0 ['CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'ENST00000507430.1_1_5:11364802-11385035:-|nuORF'] 35113 19040 GRRWHRRPRRP True NCI_RA007_Epitope_Rep4 1528.8824470518798 1528.8808049037902 82.361 3 -0.6284477842933786 0.18434422630621589 1.0 ['ENST00000527920.5_1_11:65339976-65340141:+|nuORF'] 131879 4450 VYDREVQWT True H1975_Epitope_Rep3 1194.5669371011797 1194.5658499358601 22.239 2 -0.6284504028005943 0.18434422630621589 1.0 ['ENSG00000198018|ENST00000370489|ENTPD7', 'ENST00000493385.5_1_10:101462344-101482741:+|nuORF'] 133345 7552 WEYDHSEF True H1975_Epitope_Rep2 1111.42468954159 1111.42358993586 34.002 2 -0.628626551528651 0.18444820773355913 1.0 ['SLC22A7|p.E326Nfs*10|1|0.42|ENSG00000137204|chr6:43301602-43301602|C/-|frameshift_variant', 'nc|ENSG00000137204|Q9Y694-3|SLC22A7', 'nc|ENSG00000137204|Q9Y694-2|SLC22A7', 'ENSG00000137204|ENST00000372585|SLC22A7'] 115127 5619 TTYLFGQDP True H1975_Epitope_Rep2 1040.48147614172 1040.4803699358602 26.613 2 -0.6286433500364671 0.18444820773355913 1.0 ['nc|ENSG00000147955|Q99720-3|SIGMAR1', 'ENSG00000147955|ENST00000277010|SIGMAR1', 'nc|ENSG00000147955|Q99720-5|SIGMAR1', 'nc|ENSG00000147955|Q99720-2|SIGMAR1', 'ENST00000461426.1_1_9:34635631-34637430:-|nuORF'] 30662 8833 GALGSLTVVL True NCI_RA007_Epitope_Rep4 928.5593325396 928.55822993586 40.786 2 -0.6286604159973201 0.1844609956879655 1.0 ['nc|ENSG00000168356|Q9UI33-3|SCN11A', 'ENSG00000168356|ENST00000302328|SCN11A', 'nc|ENSG00000168356|Q9UI33-2|SCN11A', 'SCN11A|p.V1596Sfs*7|1|0.29|ENSG00000168356|chr3:38847285-38847285|A/-|frameshift_variant', 'SCN11A|p.E1631Kfs*38|1|0.11|ENSG00000168356|chr3:38847179-38847179|C/-|frameshift_variant'] 85101 20754 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 85.941 3 -0.6286989029746822 0.18450514300050175 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 15183 5286 EAFGFQQATRE True H1975_Epitope_Rep3 1282.59421447818 1282.59256490379 25.416 3 -0.628803083790454 0.18453360929488688 1.0 ['KDM5C|p.E386Q|2|0.32|ENSG00000126012|chrX:53211873-53211873|C/G|missense_variant'] 66548 15202 LSSIAKKPQL True PC9_epitope_Rep6 1083.6651945904698 1083.6640899358601 70.565 2 -0.6288472384281212 0.18455339364387513 1.0 ['ENSG00000158201|ENST00000289119|ABHD3', 'ENST00000577928.5_1_18:19263865-19284533:-|nuORF', 'ENST00000579875.5_1_18:19244061-19284599:-|nuORF', 'ENST00000579982.1_1_18:19282269-19284734:-|nuORF'] 33972 6429 GNFLTKKYNH True NCI_RA007_Epitope_Rep2 1220.6302060640799 1220.62855490379 29.614 3 -0.6288516136177076 0.18455339364387513 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 118192 5619 VAVVFTEEELW True PC9_epitope_Rep4 1320.66016877968 1320.65851490379 28.411 3 -0.6288735484263065 0.18455339364387513 1.0 ['ZNF221|p.G45W|1|0.34|ENSG00000159905|chr19:43965001-43965001|G/T|missense_variant'] 72044 3326 MQRHPFFRHMN True NCI_RA007_Epitope_Rep2 1499.7026768950298 1499.70103490379 17.6 3 -0.6288967610912605 0.18455339364387513 1.0 ['RPS6KB2|p.V322M|1|0.29|ENSG00000175634|chr11:67434052-67434052|G/A|missense_variant'] 7632 7754 ASLGIDGTHY True H1975_Epitope_Rep2 1032.48762415132 1032.48652993586 34.779 2 -0.628920548165111 0.1845603913207074 1.0 ['nc|ENSG00000113657|Q14195|DPYSL3', 'DPYSL3|p.A516Qfs*15|1|0.67|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant', 'ENSG00000113657|ENST00000343218|DPYSL3'] 18228 15429 EIRVHYIL True PC9_epitope_Rep5 1041.59711503065 1041.5960099358601 64.357 2 -0.628949056517726 0.1845603913207074 1.0 ['CON__ENSEMBL:ENSBTAP00000037665'] 57598 23464 LELKLRIFRLL True PC9_epitope_Rep3 1412.9231406086399 1412.92204993586 95.533 2 -0.6289554527614805 0.1845603913207074 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 127587 19588 VQYIQDII True NCI_RA007_Epitope_Rep2 990.5385970950199 990.53750993586 81.134 2 -0.6290200993153064 0.1845731755114839 1.0 ['nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B', 'nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B', 'ENSG00000275052|ENST00000616407|PPP4R3B'] 72182 12965 MRQHRNWHNLK True NCI_RA007_Epitope_Rep1 1518.7738676893398 1518.7727699358602 54.421 2 -0.6290261100012527 0.1845859593014141 1.0 ['ENST00000425630.1_1_10:1205876-1208503:+|nuORF', 'ENST00000583117.1_1_10:1205876-1206669:+|nuORF'] 30769 10053 GAPEPFEPAQP True PC9_epitope_Rep2 1138.5294889632999 1138.52838993586 43.996 2 -0.6290647855789626 0.18460863158224772 1.0 ['ENSG00000101200|ENST00000380293|AVP'] 33883 7524 GLWIWRYQEKK True NCI_RA007_Epitope_Rep2 1505.8143184356497 1505.81266490379 33.893 3 -0.6290687185255707 0.18460863158224772 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 45669 16039 ISKDTEPVELN True PC9_epitope_Rep2 1243.62959692739 1243.6284899358602 66.95 2 -0.6290734600897617 0.18460863158224772 1.0 ['ENSG00000089775|ENST00000608382|ZBTB25'] 11162 4914 DEGPVAEQVKK True NCI_RA007_Epitope_Rep2 1198.6193665968597 1198.61826993586 23.734 2 -0.6292480015908474 0.1846754346088129 1.0 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF'] 104510 8660 SSQKSKTFNK True NCI_RA007_Epitope_Rep2 1153.6091362663299 1153.60802993586 38.332 2 -0.6292664423370875 0.1846754346088129 1.0 ['ENSG00000022840|ENST00000325954|RNF10', 'nc|ENSG00000022840|Q8N5U6-2|RNF10'] 20940 7282 EQVRYCARF True NCI_RA007_Epitope_Rep2 1170.5604122520997 1170.55930993586 32.946 2 -0.6292824814943451 0.1846754346088129 1.0 ['ENSG00000099282|ENST00000373290|TSPAN15', 'ENST00000478112.1_1_10:71211350-71243770:+|nuORF'] 70253 20615 LYNDYVDV True PC9_epitope_Rep3 999.4549270407099 999.45382993586 84.564 2 -0.6292967710390162 0.1846754346088129 1.0 ['ENST00000513085.1_1_5:95728707-95748688:-|nuORF', 'nc|ENSG00000175426|P29120-2|PCSK1', 'ENSG00000175426|ENST00000311106|PCSK1'] 45776 7570 ISNKPNVSEP True H1975_Epitope_Rep1 1083.55603806431 1083.5549499358601 34.109 2 -0.6293263106042072 0.18470099537581317 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 120395 7570 VFSHAAELQP True NCI_RA007_Epitope_Rep3 1097.5505587610498 1097.54946993586 36.904 2 -0.6293639585257251 0.18470099537581317 1.0 ['ENSG00000167094|ENST00000373289|TTC16'] 101188 18154 SLVTPIYYVF True NCI_RA007_Epitope_Rep3 1200.6430621635602 1200.64141490379 79.53 3 -0.6293807080867475 0.18472655454018214 1.0 ['ENSG00000163293|ENST00000295461|NIPAL1'] 63796 13038 LPSMPARCPL True PC9_epitope_Rep5 1083.55690709479 1083.55580993586 55.154 2 -0.629392836607143 0.18472655454018214 1.0 ['ENST00000294599.8_1_1:3417793-3417832:-|nuORF'] 53738 8075 KYEELQIT True NCI_RA007_Epitope_Rep5 1022.5284263341399 1022.5273299358599 37.749 2 -0.6294300977867378 0.18473064685506496 1.0 ['CON__ENSEMBL:ENSBTAP00000038253', 'ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 135792 13793 YENLKWTLERK True H1975_Epitope_Rep3 1478.7881632574597 1478.78706993586 58.357 2 -0.6294570068936877 0.18473064685506496 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 139746 9647 YTYSQASEI True PC9_epitope_Rep5 1060.4713053808398 1060.47020993586 42.074 2 -0.629469015441559 0.18473064685506496 1.0 ['nc|ENSG00000124496|Q96PN7|TRERF1', 'ENSG00000124496|ENST00000695948|TRERF1', 'TRERF1|p.E818Afs*14|1|0.26|ENSG00000124496|chr6:42256986-42256987|-/TG|frameshift_variant', 'nc|ENSG00000124496|Q96PN7-4|TRERF1', 'nc|ENSG00000124496|Q96PN7-5|TRERF1'] 84156 8138 QERFTQDTQP True H1975_Epitope_Rep3 1248.5734790335998 1248.5723899358602 36.28 2 -0.629480824016979 0.18473064685506496 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 43646 12317 IILKRKRGRPP True NCI_RA007_Epitope_Rep1 1332.8830071321597 1332.88135490379 51.881 3 -0.6295454179082993 0.18474342497100404 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 52075 14074 KLLEILKQGF True PC9_epitope_Rep2 1187.7277948470298 1187.72614490379 59.411 3 -0.6295854447602719 0.18475330700269577 1.0 ['ENST00000552545.1_1_12:53126121-53126646:+|nuORF'] 95332 6967 SAGETPGWL True PC9_epitope_Rep4 916.4290466460399 916.4279499358599 34.038 2 -0.629592776932496 0.18475330700269577 1.0 ['ENSG00000146409|ENST00000275227|SLC18B1'] 68333 13832 LTSASKIF True PC9_epitope_Rep4 865.49091862661 865.48982993586 61.102 2 -0.6296103259479428 0.18476318841488262 1.0 ['ENSG00000155761|ENST00000336338|SPAG17', 'SPAG17|p.S902P|1|0.13|ENSG00000155761|chr1:118055751-118055751|A/G|missense_variant'] 30494 7613 GAGSSGSR True NCI_RA007_Epitope_Rep1 677.30926586653 677.3087149679301 33.606 1 -0.6296331058466628 0.18476318841488262 1.0 ['ENST00000491557.2_1_10:77163552-77167502:+|nuORF'] 5826 19396 APGALLLE True PC9_epitope_Rep4 782.4538048419 782.45270993586 82.717 2 -0.6296636315816613 0.18477306920762288 1.0 ['ENSG00000215305|ENST00000380445|VPS16'] 90492 16465 RKAARALA True NCI_RA007_Epitope_Rep2 855.5402688608699 855.53916993586 68.773 2 -0.6296910235774383 0.18477306920762288 1.0 ['ENST00000420843.6_1_11:74976857-74977136:-|nuORF'] 118374 10280 VDISSHKPP True NCI_RA007_Epitope_Rep3 978.51344497634 978.51234993586 47.508 2 -0.6297029474266209 0.18480151702737857 1.0 ['ENSG00000139832|ENST00000267328|RAB20'] 46953 9182 IVLYLTLCK True H1975_Epitope_Rep1 1064.63038930488 1064.62928993586 40.225 2 -0.629737654795775 0.1848142924306535 1.0 ['nc|ENSG00000184619|Q6ZNG9|KRBA2', 'ENSG00000184619|ENST00000396267|KRBA2'] 42613 8245 IETFINQPK True H1975_Epitope_Rep3 1088.5866099165999 1088.58550993586 36.697 2 -0.6298579600812777 0.18490542382974723 1.0 ['ERBIN|p.S620F|1|0.14|ENSG00000112851|chr5:66048737-66048737|C/T|missense_variant'] 68084 4766 LTPCHGAL True PC9_epitope_Rep2 810.4058091036599 810.40470993586 23.702 2 -0.6298653603439612 0.18491529939040635 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 59342 12889 LGKESVAL True PC9_epitope_Rep4 815.4752685624699 815.47416993586 57.457 2 -0.6298756808759495 0.18491529939040635 1.0 ['ENST00000593076.1_1_17:73910704-73911112:-|nuORF'] 79823 20962 PIEEAYAIL True PC9_epitope_Rep4 1017.5382627418497 1017.53716993586 88.791 2 -0.6299670865542518 0.18500352581681423 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.N1473Ifs*15|1|0.19|ENSG00000124721|chr6:38848664-38848664|A/-|frameshift_variant', 'DNAH8|p.S2130Vfs*12|1|0.21|ENSG00000124721|chr6:38872578-38872578|G/-|frameshift_variant'] 134852 7329 YAAALSNG True PC9_epitope_Rep3 765.3657181134901 765.36462993586 33.2 2 -0.6299751740842309 0.18500352581681423 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1'] 74636 10059 NLEKTYRLKK True H1975_Epitope_Rep3 1291.7612202336297 1291.76012993586 43.73 2 -0.6301039742808461 0.18506330700764698 1.0 ['ENST00000524045.6_1_8:106797143-106799334:-|nuORF'] 106616 7991 SWLRHDRRRWR True H1975_Epitope_Rep1 1622.8766929651 1622.87503490379 35.688 3 -0.6301352645134758 0.18507607690740713 1.0 ['ENSG00000174010|ENST00000328046|KLHL15'] 3856 21787 AHAPHYIAH True PC9_epitope_Rep5 1015.49879797171 1015.49770993586 88.836 2 -0.6301441634239947 0.18508884640696982 1.0 ['ENSG00000062582|ENST00000317534|MRPS24', 'ENST00000414932.1_1_7:43908445-43909104:-|nuORF'] 65869 17877 LSKYYCSLTMK True PC9_epitope_Rep1 1335.65668070571 1335.6550349037902 73.557 3 -0.6302699366108249 0.18513295413591563 1.0 ['Tigger1_dup324|chr1:83019440-83021751:-|3.250534866687885|0.2214501882032552|3.88|499.0|39|2|sense'] 57226 10681 LEFDGVWI True PC9_epitope_Rep3 977.4858332461699 977.48472993586 46.029 2 -0.6303798049427731 0.18517706048260732 1.0 ['ENSG00000257743|ENST00000477922|MGAM2', 'nc|ENSG00000257743|Q2M2H8-3|MGAM2'] 118395 14262 VDLGSRLTPED True PC9_epitope_Rep5 1200.59863115228 1200.5975299358602 59.863 2 -0.6304523312446461 0.18519388954171562 1.0 ['ENST00000575556.1_1_16:67970119-67970555:-|nuORF'] 123374 6538 VICFIEREVP True NCI_RA007_Epitope_Rep1 1203.63218021003 1203.63052490379 29.445 3 -0.6304568782281215 0.18519388954171562 1.0 ['nc|ENSG00000184226|Q9HC56-2|PCDH9', 'ENSG00000184226|ENST00000377865|PCDH9'] 39888 9668 HQIQNVVTV True PC9_epitope_Rep4 1036.5665431783598 1036.5654499358602 44.815 2 -0.6304722154148453 0.18519388954171562 1.0 ['ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF'] 107589 7446 TAFLQRPSRAG True NCI_RA007_Epitope_Rep3 1202.6520041378199 1202.65090993586 36.41 2 -0.6304871833068904 0.18519388954171562 1.0 ['WNK2|p.S2101Rfs*23|1|0.26|ENSG00000165238|chr9:93300126-93300127|GT/-|frameshift_variant', 'ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2', 'WNK2|p.N1970Qfs*47|1|0.48|ENSG00000165238|chr9:93297934-93297935|-/C|frameshift_variant'] 128153 25091 VRSKGRKF True NCI_RA007_Epitope_Rep1 976.5930327097199 976.5924849679301 103.84 1 -0.6304963241216079 0.18519388954171562 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 123843 20783 VIWHYPESV True PC9_epitope_Rep3 1128.56039516876 1128.55928993586 85.214 2 -0.6305098427626055 0.185222323191176 1.0 ['ENST00000554132.1_1_14:76099973-76129466:+|nuORF'] 89608 5710 RESTEFLQQNP True H1975_Epitope_Rep3 1347.6418929465897 1347.64024490379 26.992 3 -0.6305215263052297 0.18525075594967647 1.0 ['ENSG00000055130|ENST00000325222|CUL1'] 115680 16816 TVLARMVSI True PC9_epitope_Rep6 988.57393705792 988.57282993586 77.191 2 -0.6305897005500809 0.18531052202795012 1.0 ['ENST00000487364.1_1_19:19771386-19774475:-|nuORF', 'AluSc_dup13832|chr7:33006087-33006413:-|3.1359140164592656|0.4159080058002372|2.91|502.0|13|1|anti-sense', 'ENST00000434453.1_1_7:156616573-156629563:-|nuORF'] 55738 14223 LDDSALYLSDK True PC9_epitope_Rep5 1238.60304782638 1238.6019499358601 59.715 2 -0.6306451155484359 0.18533895251374766 1.0 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 16957 5492 EGGIDGPQIAG True H1975_Epitope_Rep2 1012.4825387708798 1012.48144993586 26.138 2 -0.6306555501288112 0.1853517154942817 1.0 ['ENST00000468090.5_1_21:45179072-45179237:+|nuORF'] 19372 17665 ELNKQGFLL True PC9_epitope_Rep4 1060.59169529704 1060.5905899358602 75.975 2 -0.6307111065744594 0.18538014444392223 1.0 ['PARP4|p.K223N|1|0.27|ENSG00000102699|chr13:24494645-24494645|C/G|missense_variant'] 98579 14539 SIMYFEPAP True PC9_epitope_Rep2 1053.4841189940098 1053.48302993586 61.195 2 -0.6307534728608708 0.18539290637924552 1.0 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 37165 6538 GVTLKFQIKP True NCI_RA007_Epitope_Rep3 1129.68593003505 1129.68427490379 32.761 3 -0.6307684522155403 0.18540566791471497 1.0 ['nc|ENSG00000220201|P0C6A0-1|ZGLP1', 'ENSG00000220201|ENST00000707000|ZGLP1'] 90187 12925 RHHRRRPRHPE True NCI_RA007_Epitope_Rep5 1532.8409761627197 1532.8393349037901 56.398 3 -0.6308837452865593 0.18548109158128898 1.0 ['ENST00000373109.6_1_10:73819178-73819268:-|nuORF'] 71231 18126 MFVFKERWFWR True PC9_epitope_Rep4 1630.8231092975398 1630.82200993586 77.786 2 -0.6309149188394073 0.18550951672280097 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 40664 8335 HTLFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep1 1218.5703085088896 1218.56920993586 36.992 2 -0.631006900198407 0.1855536061156714 1.0 ['CON__P02769'] 55433 7733 LATQAEQQEW True NCI_RA007_Epitope_Rep1 1202.5567663403 1202.5556699358601 34.073 2 -0.6310429305116626 0.18556636433416357 1.0 ['ENST00000582655.5_1_17:27237828-27251299:-|nuORF', 'nc|ENSG00000109118|Q96QT6-2|PHF12', 'ENST00000582436.5_1_17:27237055-27251401:-|nuORF', 'nc|ENSG00000109118|Q96QT6-5|PHF12', 'nc|ENSG00000109118|Q96QT6-3|PHF12', 'ENSG00000109118|ENST00000332830|PHF12', 'nc|ENSG00000109118|Q96QT6-4|PHF12'] 88120 4958 QWFYFRVQNTR True NCI_RA007_Epitope_Rep4 1543.7684308723897 1543.76677490379 25.538 3 -0.631097246255614 0.18562611610639432 1.0 ['ENST00000529712.5_1_11:47690447-47736202:-|nuORF', 'AGBL2|p.K752Efs*6|1|0.53|ENSG00000165923|chr11:47667658-47667659|-/T|frameshift_variant', 'ENSG00000165923|ENST00000525123|AGBL2'] 137958 12793 YPVLMRRQVCL True NCI_RA007_Epitope_Rep1 1376.7420820955201 1376.7409899358602 53.75 2 -0.6311380006333147 0.18563887278936073 1.0 ['OR2Z1|p.W149Lfs*32|1|0.32|ENSG00000181733|chr19:8731472-8731473|-/T|frameshift_variant', 'ENSG00000181733|ENST00000641125|OR2Z1'] 85238 5828 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 30.632 3 -0.6311864705240238 0.18569862155388472 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 123012 6352 VGYAVHDNWI True NCI_RA007_Epitope_Rep3 1172.5614577979197 1172.55982490379 31.989 3 -0.6311974055527619 0.18571137670149276 1.0 ['ENSG00000157184|ENST00000371486|CPT2'] 79301 3951 PGKFWFKNDVP True NCI_RA007_Epitope_Rep2 1333.68190728377 1333.68025490379 20.006 3 -0.6312725933506569 0.18574963974688302 1.0 ['nc|ENSG00000156313|Q92834-5|RPGR', 'nc|ENSG00000156313|Q92834-3|RPGR', 'nc|ENSG00000156313|Q92834-4|RPGR', 'nc|ENSG00000156313|Q92834-2|RPGR', 'nc|ENSG00000156313|Q92834|RPGR', 'ENSG00000156313|ENST00000645032|RPGR'] 78687 21208 PEDLASKIL True PC9_epitope_Rep5 984.54916177872 984.54806993586 86.625 2 -0.6312870625530067 0.18574963974688302 1.0 ['ENST00000479016.2_1_12:56618280-56618448:+|nuORF'] 1037 4446 AEAGRNVMVP True H1975_Epitope_Rep2 1042.52296411422 1042.5218699358602 22.212 2 -0.6312956876147064 0.18574963974688302 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant'] 16786 15184 EFHIVQVS True PC9_epitope_Rep1 957.4919812557699 957.49088993586 63.227 2 -0.6313467322241005 0.18577805622993188 1.0 ['nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8', 'ENSG00000153339|ENST00000283351|TRAPPC8'] 947 11043 ADVWSFGVL True PC9_epitope_Rep3 992.4967322830398 992.49562993586 47.47 2 -0.6313720328013244 0.18579080913447985 1.0 ['ENST00000526097.1_1_8:11418120-11421614:+|nuORF', 'ENSG00000136573|ENST00000259089|BLK'] 135002 11366 YAGSGNVL True PC9_epitope_Rep1 779.38136817763 779.3808149679301 48.6 1 -0.631424782658631 0.18579774154646117 1.0 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2', 'ENST00000496925.5_1_3:184023699-184025408:+|nuORF'] 86268 7088 QQDAENAF True NCI_RA007_Epitope_Rep5 921.38282472961 921.38227496793 33.945 1 -0.6314352630480324 0.18579774154646117 1.0 ['ENST00000425046.1_1_3:4345037-4358927:+|nuORF', 'nc|ENSG00000170364|Q53H47-3|SETMAR', 'ENSG00000170364|ENST00000358065|SETMAR'] 62878 24492 LMRFRKPWPLR True PC9_epitope_Rep5 1498.8707281962998 1498.86907490379 99.287 3 -0.6314370548462038 0.18579774154646117 1.0 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 68969 6579 LVGGFSCS True H1975_Epitope_Rep3 768.3476255212 768.3470749679301 30.261 1 -0.631538691855422 0.1858545676653459 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 6781 4721 AQFAHSYEFY True H1975_Epitope_Rep2 1261.54038800017 1261.53874490379 23.252 3 -0.6315605605301806 0.1858545676653459 1.0 80628 21416 PLPLMVSTPVI True PC9_epitope_Rep5 1165.67806777329 1165.6769699358601 87.442 2 -0.6315821716240715 0.1858673181732757 1.0 ['ENST00000394919.5_1_10:73856875-73857049:-|nuORF'] 106048 8685 SVLRAFAARP True H1975_Epitope_Rep1 1086.62981214126 1086.6287099358601 38.337 2 -0.6316269299193767 0.18588006828183484 1.0 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5'] 111294 5676 TLHIYQYRMEK True H1975_Epitope_Rep1 1480.7496695737598 1480.74802490379 26.9 3 -0.6316973306860306 0.18590556730091615 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'ENSG00000162849|ENST00000407071|KIF26B'] 102407 7146 SPVVPAPR True PC9_epitope_Rep4 821.47593726881 821.47484993586 34.764 2 -0.6317072003235535 0.18590556730091615 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 133417 24594 WFWKLVPARYR True H1975_Epitope_Rep1 1520.8404736138398 1520.83936993586 101.91 2 -0.6317445994128638 0.18593397644700577 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2'] 3702 6164 AGSEDWGQAP True PC9_epitope_Rep2 1016.4199385143198 1016.41884993586 29.102 2 -0.6317887566200693 0.18594672471303067 1.0 ['ENST00000263708.6_1_2:120517626-120517854:+|nuORF'] 45339 10504 ISDDIPLQLVT True NCI_RA007_Epitope_Rep1 1212.66016877968 1212.65906993586 44.841 2 -0.6318288956759984 0.1859722200472917 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant'] 105127 11038 STLPKSLSL True PC9_epitope_Rep5 944.55424715916 944.55314993586 47.445 2 -0.6318587981175453 0.1859722200472917 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 111886 13140 TLRRFQPSP True PC9_epitope_Rep2 1100.6090766966797 1100.6079699358602 55.815 2 -0.6318942170156596 0.1859849671155653 1.0 ['ENST00000471480.6_1_22:30682838-30683547:-|nuORF'] 119652 22252 VESIRRFP True PC9_epitope_Rep3 1002.5610638750999 1002.55996993586 90.878 2 -0.6319256459122083 0.18600463484905425 1.0 ['ENSG00000110871|ENST00000288532|COQ5'] 19702 14088 ELSFSSSTMSF True PC9_epitope_Rep1 1221.5223549775299 1221.5206949037902 59.021 3 -0.6319281958345997 0.18600463484905425 1.0 ['ENST00000555343.2_1_20:30948221-30948338:+|nuORF'] 77876 7177 PAGREMAV True PC9_epitope_Rep5 829.4116227600898 829.41052993586 32.573 2 -0.6319388102053115 0.18600463484905425 1.0 ['ENST00000583444.1_1_17:80187666-80187933:+|nuORF'] 45071 11484 IQQSHDNPS True H1975_Epitope_Rep2 1024.4573866521998 1024.45628993586 49.228 2 -0.6319895881941656 0.18600463484905425 1.0 ['nc|ENSG00000147316|Q8NEM0-2|MCPH1', 'nc|ENSG00000147316|Q8NEM0-3|MCPH1', 'MCPH1|p.P750Rfs*29|1|0.51|ENSG00000147316|chr8:6621484-6621484|G/-|frameshift_variant', 'ENSG00000147316|ENST00000344683|MCPH1'] 17953 21868 EIERSPLLEW True H1975_Epitope_Rep3 1270.6557521055797 1270.65464993586 91.424 2 -0.6320233405784159 0.18601738041180615 1.0 ['ENSG00000138658|ENST00000505019|ZGRF1', 'nc|ENSG00000138658|Q86YA3-2|ZGRF1', 'nc|ENSG00000138658|Q86YA3-7|ZGRF1'] 2309 3898 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 20.114 2 -0.6320854965818167 0.1860457833589077 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 39323 4736 HLSCLGLGKRP True NCI_RA007_Epitope_Rep2 1179.65464699011 1179.65299490379 23.052 3 -0.6321779641801839 0.18609967276769637 1.0 ['ENSG00000109685|ENST00000508803|NSD2', 'nc|ENSG00000109685|O96028-4|NSD2', 'nc|ENSG00000109685|O96028-2|NSD2', 'ENST00000353275.9_2_4:1944147-1980633:+|nuORF'] 118262 3309 VCNRHCENGG True PC9_epitope_Rep1 1087.42874645955 1087.42764993586 17.631 2 -0.6321952848785488 0.18609967276769637 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 36120 5980 GVEPPDRIR True NCI_RA007_Epitope_Rep5 1037.5617921510898 1037.5606899358602 29.685 2 -0.6322057192621774 0.18609967276769637 1.0 ['nc|ENSG00000163576|Q8N7U6-2|EFHB', 'ENST00000498089.1_1_3:19936277-19975510:-|nuORF', 'nc|ENSG00000163576|Q8N7U6-3|EFHB', 'ENSG00000163576|ENST00000295824|EFHB'] 45765 3262 ISNIEDLPP True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 17.234 2 -0.6322284144704131 0.186109501964898 1.0 ['nc|ENSG00000197381|P78563-6|ADARB1', 'ENSG00000197381|ENST00000348831|ADARB1', 'nc|ENSG00000197381|P78563-3|ADARB1', 'nc|ENSG00000197381|P78563-4|ADARB1', 'nc|ENSG00000197381|P78563|ADARB1', 'nc|ENSG00000197381|P78563-5|ADARB1'] 37028 13002 GVSALEVYP True H1975_Epitope_Rep1 933.4807478657299 933.4801949679301 55.095 1 -0.6322493893397678 0.186109501964898 1.0 ['nc|ENSG00000197965|O95297-2|MPZL1'] 129991 8804 VTPGARRRQ True PC9_epitope_Rep1 1039.59990899531 1039.5988099358601 38.706 2 -0.6323807089705415 0.1861379008016032 1.0 ['ENST00000339824.6_2_12:118406619-118406781:-|nuORF'] 81274 5665 PPPQVRRP True H1975_Epitope_Rep2 945.5508335445699 945.54972993586 26.788 2 -0.6324231166160749 0.1861662987490802 1.0 ['ENST00000468083.1_1_7:143078664-143079645:+|nuORF'] 128157 25044 VRSKGRKF True NCI_RA007_Epitope_Rep5 976.5930327097199 976.5924849679301 103.83 1 -0.632455724997698 0.18617321059552883 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 73452 6899 NETSSFREESP True H1975_Epitope_Rep2 1281.54732385541 1281.54622993586 31.457 2 -0.6324928173864415 0.18617321059552883 1.0 ['STYXL2|p.S1032F|1|0.4|ENSG00000198842|chr1:167128226-167128226|C/T|missense_variant'] 53685 8418 KYAINPHL True NCI_RA007_Epitope_Rep4 954.5287011176599 954.52760993586 39.193 2 -0.6325256889295184 0.18617321059552883 1.0 ['ENSG00000141101|ENST00000268802|NOB1'] 135796 18179 YENLKWTLERK True PC9_epitope_Rep6 1478.7881632574597 1478.78706993586 82.566 2 -0.632539847784907 0.18618303641316258 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 54548 18109 LAAPPCAW True PC9_epitope_Rep1 827.39999544723 827.39888993586 74.449 2 -0.6325430361835009 0.18618303641316258 1.0 ['ENST00000228606.8_1_12:58158304-58160873:-|nuORF', 'ENST00000546567.5_2_12:58158304-58159309:-|nuORF', 'ENST00000547451.1_1_12:58158414-58159309:-|nuORF'] 128155 24848 VRSKGRKF True NCI_RA007_Epitope_Rep5 976.5930327097199 976.5924849679301 103.07 1 -0.632614783392789 0.18623690925314257 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 29365 21054 FVELFKSF True PC9_epitope_Rep6 1015.5378688190299 1015.53676993586 93.806 2 -0.6326301243418967 0.18623690925314257 1.0 ['nc|ENSG00000138193|Q9P212-2|PLCE1', 'ENSG00000138193|ENST00000371380|PLCE1'] 82462 7342 PVDPQAGP True H1975_Epitope_Rep2 779.38136817763 779.38026993586 33.182 2 -0.6326515017556269 0.18623690925314257 1.0 ['ENSG00000167074|ENST00000266304|TEF'] 128682 5222 VSNANQTVP True PC9_epitope_Rep5 928.46140940348 928.46030993586 25.103 2 -0.6326818378107463 0.18626054563383368 1.0 ['nc|ENSG00000118518|Q9NTX7-2|RNF146', 'ENSG00000118518|ENST00000368314|RNF146'] 140386 1589 YYESTRKENL True PC9_epitope_Rep1 1301.6251802532897 1301.62354490379 8.7676 3 -0.6326908563948371 0.18626054563383368 1.0 ['ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'FLG|p.H1181Qfs*2|1|0.26|ENSG00000143631|chr1:152311343-152311344|-/T|frameshift_variant'] 45309 6314 ISASDFDFAV True NCI_RA007_Epitope_Rep3 1070.49204082542 1070.49094993586 31.838 2 -0.6327043583595261 0.18626054563383368 1.0 ['nc|ENSG00000169760|Q8N2Q7-2|NLGN1', 'ENSG00000169760|ENST00000695368|NLGN1', 'nc|ENSG00000169760|Q8N2Q7|NLGN1'] 81458 21507 PQLAKFSP True PC9_epitope_Rep3 886.4912529797799 886.49070496793 88.021 1 -0.632766890277892 0.18626054563383368 1.0 ['nc|ENSG00000115419|O94925-3|GLS', 'ENSG00000115419|ENST00000320717|GLS', 'ENST00000469774.1_1_2:191760380-191769916:+|nuORF'] 35891 10433 GVAGEAVFI True H1975_Epitope_Rep1 861.45961849833 861.4590749679301 45.084 1 -0.6327789131991275 0.18626054563383368 1.0 ['ENST00000487921.5_1_17:56769962-56783250:+|nuORF', 'ENST00000475762.5_1_17:56772326-56801433:+|nuORF', 'ENSG00000108384|ENST00000337432|RAD51C'] 66425 3774 LSRLRNKP True NCI_RA007_Epitope_Rep4 982.6035973934199 982.60250993586 20.686 2 -0.6327847358419864 0.18626054563383368 1.0 ['SMG6|p.A1287Pfs*42|1|0.16|ENSG00000070366|chr17:2065656-2065656|C/-|frameshift_variant', 'ENSG00000070366|ENST00000263073|SMG6'] 27559 19162 FPLTCRLWLW True PC9_epitope_Rep5 1333.7005345533698 1333.69888490379 78.743 3 -0.6327908969387706 0.18626054563383368 1.0 ['ENST00000337318.7_2_10:126308405-126308534:-|nuORF'] 85236 5601 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 29.606 3 -0.6327919295759972 0.18626054563383368 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 111368 18703 TLIPDHPDF True PC9_epitope_Rep6 1053.51311062317 1053.51200993586 84.583 2 -0.6328604427372638 0.18628310273586676 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP', 'NRAP|p.R1502Q|2|0.22|ENSG00000197893|chr10:113595654-113595654|C/T|missense_variant'] 33577 18124 GLKTHLDQL True PC9_epitope_Rep5 1023.57129420563 1023.57018993586 74.724 2 -0.632878579483894 0.18628310273586676 1.0 ['nc|ENSG00000164488|Q5SW24-4|DACT2', 'ENSG00000164488|ENST00000366795|DACT2'] 87304 13257 QSVGLLTNEL True PC9_epitope_Rep4 1072.57643915572 1072.57534993586 58.892 2 -0.632909959813285 0.18628310273586676 1.0 ['ENSG00000198483|ENST00000355594|ANKRD35'] 83388 16452 QASPPEEKVP True PC9_epitope_Rep2 1080.54513902744 1080.5440499358601 68.523 2 -0.6329619472150665 0.18630857357498357 1.0 ['ARHGAP27|p.S567Lfs*9|1|0.15|ENSG00000159314|chr17:45402757-45402758|GA/-|frameshift_variant', 'nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27', 'ENSG00000159314|ENST00000685559|ARHGAP27', 'nc|ENSG00000159314|Q6ZUM4-2|ARHGAP27'] 72179 23593 MRPRLWLLLAA True PC9_epitope_Rep2 1338.79583192054 1338.79472993586 96.22 2 -0.6329631223777148 0.18630857357498357 1.0 ['ENSG00000254126|ENST00000643224|CD8B2', 'nc|ENSG00000172116|P10966-7|CD8B', 'nc|ENSG00000172116|P10966-9|CD8B', 'nc|ENSG00000172116|P10966-8|CD8B', 'ENSG00000172116|ENST00000390655|CD8B', 'nc|ENSG00000172116|P10966-3|CD8B', 'nc|ENSG00000172116|P10966-2|CD8B', 'nc|ENSG00000172116|P10966-6|CD8B', 'nc|ENSG00000172116|P10966-4|CD8B'] 55130 10451 LAMCNLREIPN True H1975_Epitope_Rep1 1272.6318629401999 1272.63022490379 45.154 3 -0.6329698402488465 0.1863154764699438 1.0 ['ENSG00000148948|ENST00000528697|LRRC4C', 'LRRC4C|p.Y340Cfs*17|1|0.2|ENSG00000148948|chr11:40115274-40115275|-/AC|frameshift_variant'] 128650 19119 VSLLRLRL True H1975_Epitope_Rep2 968.64948495668 968.64838993586 79.359 2 -0.6329723285173244 0.1863154764699438 1.0 ['ENST00000590444.5_1_19:6471408-6475578:-|nuORF', 'nc|ENSG00000205744|Q8IV53-2|DENND1C', 'ENSG00000205744|ENST00000381480|DENND1C'] 58471 16270 LEYKRVPNS True PC9_epitope_Rep1 1104.5927579262 1104.5916699358602 67.401 2 -0.6329987348084335 0.1863154764699438 1.0 ['ENST00000475183.1_1_X:54953428-54957230:+|nuORF', 'nc|ENSG00000067445|Q12816-5|TRO', 'nc|ENSG00000067445|Q12816-2|TRO', 'ENST00000492706.5_1_X:54953428-54957450:+|nuORF', 'nc|ENSG00000067445|Q12816-3|TRO', 'nc|ENSG00000067445|Q12816-4|TRO', 'ENSG00000067445|ENST00000173898|TRO'] 48421 10276 KEDQTEYLEER True PC9_epitope_Rep1 1438.65760258038 1438.6565099358602 44.411 2 -0.6330513567090313 0.18636349410034114 1.0 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 93427 20677 RRYRRNFNYRR True NCI_RA007_Epitope_Rep2 1655.8981566856696 1655.8970499358602 85.516 2 -0.6330535507265403 0.18636349410034114 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 92788 23566 RRKRRRMKKKK True PC9_epitope_Rep4 1570.0314197846894 1570.0303299358602 98.954 2 -0.6330637792194602 0.18636349410034114 1.0 ['ENST00000235372.11_1_1:14105080-14105206:+|nuORF'] 7403 8777 ASALGKQLN True PC9_epitope_Rep1 900.50288029264 900.50178993586 38.601 2 -0.6331016114146153 0.18636349410034114 1.0 ['CON__P15497'] 128453 14387 VSEQRILL True PC9_epitope_Rep2 956.5654805491998 956.56438993586 60.601 2 -0.6331146678231869 0.18636349410034114 1.0 ['ENST00000561139.1_1_15:45009953-45010131:+|nuORF'] 74392 8028 NITKSVAV True PC9_epitope_Rep3 830.4861675993399 830.48506993586 35.855 2 -0.6331325193860444 0.18639187518582853 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 66055 8220 LSNGPPAP True PC9_epitope_Rep1 751.38645355807 751.38534993586 36.451 2 -0.6331489023827419 0.18639877319813475 1.0 ['ENSG00000149499|ENST00000394773|EML3', 'nc|ENSG00000149499|Q32P44-2|EML3', 'nc|ENSG00000149499|Q32P44-3|EML3'] 58275 11088 LETETESL True PC9_epitope_Rep4 920.43385724296 920.43276993586 50.425 2 -0.633170606955273 0.18639877319813475 1.0 ['ENST00000395474.7_2_3:49053065-49053377:+|nuORF'] 102404 7325 SPVVPAPR True PC9_epitope_Rep2 821.47593726881 821.47484993586 33.558 2 -0.6331939323753214 0.18639877319813475 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 134182 18873 WRLNRMFL True NCI_RA007_Epitope_Rep5 1134.61205390214 1134.6103949037902 79.439 3 -0.6332295295704928 0.18641150421706543 1.0 ['ENST00000525154.1_1_11:9779436-9779646:-|nuORF'] 110899 18438 TLALLHPSQP True PC9_epitope_Rep1 1075.60259433391 1075.6014899358602 75.713 2 -0.6332892730500881 0.18646534188702862 1.0 ['ENST00000308768.9_1_16:29918018-29918189:-|nuORF'] 122264 12043 VGRRRIKL True NCI_RA007_Epitope_Rep5 996.6668663563198 996.66576993586 52.983 2 -0.6333018630924017 0.18646534188702862 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2'] 129121 6262 VTCSCLISRK True NCI_RA007_Epitope_Rep2 1108.57328543492 1108.57218993586 28.962 2 -0.6333078260576349 0.18646534188702862 1.0 ['ENST00000372715.6_1_9:131396210-131396525:-|nuORF'] 14130 8724 DSEVSEESPC True NCI_RA007_Epitope_Rep4 1080.3917347308 1080.3911749679298 40.348 1 -0.6334711015848816 0.1865191745028398 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 80249 11135 PLDEPGLGV True PC9_epitope_Rep5 895.4650978015899 895.46400993586 47.815 2 -0.6335147016731271 0.1865191745028398 1.0 ['ENSG00000103269|ENST00000352681|RHBDL1', 'nc|ENSG00000103269|O75783|RHBDL1', 'ENST00000450775.2_1_16:725790-727700:+|nuORF'] 22417 6414 ETFGKIQESEK True H1975_Epitope_Rep3 1294.6404959642598 1294.6393899358602 29.648 2 -0.633519244836806 0.1865191745028398 1.0 ['ENSG00000174106|ENST00000308330|LEMD3', 'LEMD3-MSRB3|2|fusion', 'LEMD3-MSRB3|1|fusion'] 74308 15069 NILDIVRPP True PC9_epitope_Rep4 1035.6076797143498 1035.60658993586 65.895 2 -0.6335425805066359 0.18652898380661817 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 35778 10105 GTVKELPKGP True PC9_epitope_Rep3 1024.5916952970397 1024.5905899358602 43.821 2 -0.6335772190813665 0.18652898380661817 1.0 ['ENSG00000157637|ENST00000374759|SLC38A10'] 19269 14511 ELLLFEVAWE True PC9_epitope_Rep6 1247.64379043955 1247.64268993586 67.699 2 -0.6335996149466686 0.18654171099568184 1.0 ['ENSG00000111713|ENST00000261195|GYS2', 'GYS2|p.S526Vfs*2|1|0.18|ENSG00000111713|chr12:21542566-21542566|G/-|frameshift_variant'] 111612 9920 TLNPDSHLIE True NCI_RA007_Epitope_Rep5 1137.56660274801 1137.56550993586 44.799 2 -0.6336430256239677 0.1865700830764898 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 135326 4671 YCRRWRYWEYW True NCI_RA007_Epitope_Rep1 1765.7936000744096 1765.79194490379 22.252 3 -0.6337158131946804 0.18658280922431866 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 105331 16531 STVLQKPNP True PC9_epitope_Rep1 982.5447451046199 982.54364993586 68.41 2 -0.6338401676597111 0.18664246937530313 1.0 ['nc|ENSG00000113282|Q14677-2|CLINT1', 'nc|ENSG00000113282|Q14677-3|CLINT1'] 90568 24562 RKGKKKKRWH True NCI_RA007_Epitope_Rep5 1350.8472903297798 1350.8461899358601 101.95 2 -0.6338479100525918 0.18665519399249061 1.0 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 128154 23749 VRSKGRKF True NCI_RA007_Epitope_Rep4 976.5930327097199 976.5924849679301 102.97 1 -0.6339109684893841 0.18669920683343502 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 95904 3560 SDTWEPPRHVK True NCI_RA007_Epitope_Rep2 1350.6680481247802 1350.66640490379 18.496 3 -0.6339681125057003 0.18672465309825884 1.0 ['ENSG00000165156|ENST00000395571|ZHX1'] 119173 9559 VEKGFAQMDP True H1975_Epitope_Rep3 1120.5222954078797 1120.52118993586 41.778 2 -0.633969631079527 0.18672465309825884 1.0 ['REST|p.S605F|1|0.41|ENSG00000084093|chr4:56930672-56930672|C/T|missense_variant'] 134144 24916 WRFRLLCLL True NCI_RA007_Epitope_Rep5 1218.7059542869797 1218.70484993586 103.33 2 -0.6340183730149609 0.1867784625973782 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 82016 15189 PSTGVDTM True H1975_Epitope_Rep1 806.34801944402 806.3474749679301 63.687 1 -0.6340235432689355 0.1867784625973782 1.0 ['nc|ENSG00000008838|O75448-2|MED24', 'ENSG00000008838|ENST00000394128|MED24'] 43972 11438 ILGETTLRRY True H1975_Epitope_Rep1 1220.6877209402 1220.68662993586 48.976 2 -0.6340370110408576 0.1867784625973782 1.0 ['ENST00000509581.5_1_5:276829-276922:+|nuORF'] 51906 22375 KKRRRRRKESF True H1975_Epitope_Rep2 1545.9440442489297 1545.94240490379 92.471 3 -0.63417591691389 0.18683811222175295 1.0 ['ENSG00000164626|ENST00000359534|KCNK5'] 116346 15693 TVYDRTTVL True PC9_epitope_Rep3 1066.5658744720201 1066.56476993586 65.505 2 -0.6342113882425333 0.18686355175272568 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 12790 19414 DLIHEIYTV True PC9_epitope_Rep6 1101.57062549929 1101.5695299358601 87.331 2 -0.6342249911801996 0.18686355175272568 1.0 ['ENSG00000147604|ENST00000352983|RPL7', 'ENST00000461513.1_1_17:49579856-49580498:-|nuORF', 'ENST00000481157.1_1_12:65261855-65261975:-|nuORF'] 111030 16816 TLDNYSSSI True PC9_epitope_Rep3 998.4556553167001 998.45454993586 69.835 2 -0.6343499503938382 0.18689878466519638 1.0 ['ENSG00000198722|ENST00000635942|UNC13B'] 57771 8843 LENYRNVVS True PC9_epitope_Rep3 1092.55637241748 1092.55526993586 38.967 2 -0.6343581899299898 0.18689878466519638 1.0 ['ENSG00000172006|ENST00000317243|ZNF554'] 127658 22119 VRELRGLG True PC9_epitope_Rep4 898.5348491272598 898.53374993586 93.297 2 -0.6343601032282413 0.18689878466519638 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 48249 7634 KDFNTLTLY True H1975_Epitope_Rep3 1113.57062549929 1113.5695299358601 34.346 2 -0.6343622619292604 0.18689878466519638 1.0 ['ADCY4|p.P562T|1|0.57|ENSG00000129467|chr14:24325859-24325859|G/T|missense_variant'] 115176 6517 TVALRGAVTL True PC9_epitope_Rep6 999.60767971435 999.60658993586 33.74 2 -0.6344440040189028 0.18691544934154963 1.0 ['nc|ENSG00000163626|Q8N8Q8-2|COX18', 'nc|ENSG00000163626|Q8N8Q8-3|COX18', 'ENST00000421792.2_1_4:73934271-73935366:-|nuORF', 'nc|ENSG00000163626|Q8N8Q8-4|COX18', 'nc|ENSG00000163626|Q8N8Q8|COX18', 'ENSG00000163626|ENST00000507544|COX18'] 138810 10299 YSDHYGLYH True H1975_Epitope_Rep2 1153.48287312405 1153.48176993586 44.621 2 -0.6344579730022148 0.18691544934154963 1.0 ['ENSG00000130590|ENST00000369886|SAMD10', 'ENST00000478694.1_1_20:62606865-62609703:-|nuORF'] 30879 9546 GARLYQGV True PC9_epitope_Rep5 862.4661008610998 862.4650099358599 41.676 2 -0.6344591342347095 0.18691544934154963 1.0 ['TIE1|p.D175Gfs*67|1|0.26|ENSG00000066056|chr1:43306876-43306877|-/G|frameshift_variant'] 108157 6934 TDRRYNNGTWY True PC9_epitope_Rep2 1444.6483753093598 1444.64671490379 32.073 3 -0.6344835301876379 0.18691544934154963 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'ENST00000488064.5_1_18:6961676-6965410:-|nuORF', 'ENST00000490190.1_1_18:6964066-6965410:-|nuORF'] 25554 10880 FERREGYL True PC9_epitope_Rep2 1068.5352430500798 1068.5341499358601 47.167 2 -0.6344990224467916 0.18691544934154963 1.0 ['ENST00000592852.1_2_19:45910101-45910188:+|nuORF'] 22903 5608 EVFEFMVYEVP True H1975_Epitope_Rep1 1387.6369908069498 1387.63534490379 26.639 3 -0.6345186655645383 0.18694380581491735 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3'] 89915 8075 RFSFSPTGMLK True H1975_Epitope_Rep1 1269.6539782837701 1269.65288993586 36.004 2 -0.6345861361971018 0.18697216140131373 1.0 ['ENSG00000089505|ENST00000379500|CMTM1'] 57351 10155 LEHFQEAS True H1975_Epitope_Rep2 959.43486030247 959.43376993586 44.061 2 -0.6348721862424717 0.18702886991335899 1.0 ['nc|ENSG00000136114|Q9NS62-2|THSD1', 'ENSG00000136114|ENST00000258613|THSD1'] 17146 8761 EGVVEC[Carbamidomethyl]SFVK True NCI_RA007_Epitope_Rep2 1152.5485104351499 1152.54740993586 38.723 2 -0.6348908606252529 0.18702886991335899 1.0 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000424167.2_1_7:75689738-75694307:+|nuORF'] 124254 13428 VLDCAYPVTPP True PC9_epitope_Rep1 1173.5739966275698 1173.57288993586 56.512 2 -0.6349721664462721 0.1870699361941699 1.0 ['COL5A2|p.D84Y|1|0.4|ENSG00000204262|chr2:189110297-189110297|C/A|missense_variant'] 112000 10244 TLSPYPVI True NCI_RA007_Epitope_Rep4 888.4956696538799 888.49456993586 46.258 2 -0.6349888903261306 0.1870699361941699 1.0 ['ENSG00000161714|ENST00000619929|PLCD3'] 59548 13536 LGRAGGLVGWG True PC9_epitope_Rep5 1041.5719629119699 1041.5708699358602 57.088 2 -0.6350193989914972 0.18707679797332166 1.0 ['ENST00000506530.5_1_4:1323389-1323932:+|nuORF'] 128151 19353 VRSDRILGRC True NCI_RA007_Epitope_Rep2 1173.64005955513 1173.6384149037901 80.182 3 -0.6350553232218775 0.18707679797332166 1.0 ['ENST00000233336.6_1_2:113288071-113288143:+|nuORF'] 85451 12932 QLFWQHPDVFY True H1975_Epitope_Rep1 1478.6982856239001 1478.69718993586 54.817 2 -0.6350865572585341 0.18707679797332166 1.0 ['CHST4|p.G63W|1|0.13|ENSG00000140835|chr16:71536864-71536864|G/T|missense_variant'] 51820 24531 KKKKRKWLRQE True NCI_RA007_Epitope_Rep5 1526.9521493211398 1526.95104993586 101.83 2 -0.6352217614773238 0.1871520610496028 1.0 ['ENSG00000187862|ENST00000368236|TTC24'] 78827 17783 PEPRRAWAV True PC9_epitope_Rep6 1080.58286194884 1080.5817699358602 81.037 2 -0.6352635795636618 0.18715891854701255 1.0 ['ENST00000602819.5_1_4:119199941-119200194:+|nuORF'] 130191 19652 VTRWRRNE True PC9_epitope_Rep4 1115.59482361487 1115.5937299358602 83.71 2 -0.6352970813372382 0.18715891854701255 1.0 ['ENSG00000142185|ENST00000397928|TRPM2', 'nc|ENSG00000142185|O94759-2|TRPM2'] 48236 6381 KDDKSLVP True NCI_RA007_Epitope_Rep2 900.4916469025999 900.49054993586 29.428 2 -0.635306236087731 0.18715891854701255 1.0 ['ENST00000301318.7_1_19:57059230-57060426:+|nuORF'] 41364 6047 IANPLLAVP True NCI_RA007_Epitope_Rep1 906.5538532363399 906.55274993586 27.563 2 -0.6353782297739714 0.18719412086623408 1.0 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 69230 18870 LVNGERDLL True PC9_epitope_Rep2 1027.56620882519 1027.5651099358602 77.949 2 -0.6354112150064194 0.18719412086623408 1.0 ['ENST00000529460.1_1_11:118272380-118277657:+|nuORF'] 39047 25400 HKRYKIQKKVR True PC9_epitope_Rep1 1482.9259345732999 1482.92482993586 102.67 2 -0.6354117708639869 0.18719412086623408 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 127467 16533 VQSTSQLSI True PC9_epitope_Rep3 961.5080252427299 961.5074749679301 68.732 1 -0.6354280549558654 0.18719412086623408 1.0 ['ENSG00000175294|ENST00000312106|CATSPER1'] 72867 10472 NAQFKSLV True PC9_epitope_Rep6 905.4970666362099 905.49596993586 51.039 2 -0.6354511845062398 0.1872136837661627 1.0 ['ENST00000533507.5_1_11:47602194-47606030:+|nuORF', 'nc|ENSG00000213619|O75489-2|NDUFS3', 'ENSG00000213619|ENST00000263774|NDUFS3'] 117089 8465 TYRKDLYVQ True PC9_epitope_Rep4 1184.61897267404 1184.61733490379 40.03 3 -0.6354635614141664 0.1872136837661627 1.0 ['ARR3|p.F71Y|1|0.54|ENSG00000120500|chrX:70276148-70276148|T/A|missense_variant'] 35410 17843 GTDGFVINL True PC9_epitope_Rep2 934.47599683846 934.47488993586 73.932 2 -0.6354811824928918 0.1872136837661627 1.0 ['ENSG00000100079|ENST00000215886|LGALS2'] 95866 11219 SDNVTNYIY True H1975_Epitope_Rep3 1087.4822044177101 1087.48110993586 48.253 2 -0.6354993998011012 0.1872136837661627 1.0 ['VEZT|p.C298Y|1|0.21|ENSG00000028203|chr12:95274786-95274786|G/A|missense_variant'] 95331 7202 SAGETPGWL True PC9_epitope_Rep2 916.4290466460399 916.4279499358599 33.093 2 -0.6355062968794278 0.18722639149468417 1.0 ['ENSG00000146409|ENST00000275227|SLC18B1'] 17876 5091 EIDEAKKK True NCI_RA007_Epitope_Rep3 959.52876068731 959.52766993586 27.017 2 -0.6356133018729818 0.18736417504416755 1.0 ['nc|ENSG00000239474|O60662-2|KLHL41', 'ENSG00000239474|ENST00000284669|KLHL41'] 117368 10181 VAATYPYQV True PC9_epitope_Rep4 1010.50729696674 1010.50618993586 46.838 2 -0.6356256157542091 0.18737688002251338 1.0 ['ENSG00000164933|ENST00000297578|SLC25A32', 'ENST00000523701.1_1_8:104413742-104414267:-|nuORF'] 19532 4610 ELQQQNTAP True H1975_Epitope_Rep2 1027.4934378077498 1027.4923499358601 22.835 2 -0.6357168276034424 0.18741792258145207 1.0 ['CON__Q58D62'] 20810 5946 EQNWRQHREAY True H1975_Epitope_Rep1 1515.69672248411 1515.69508490379 27.942 3 -0.6357385205132422 0.18741792258145207 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 15885 7124 EDPLLVCQKEP True NCI_RA007_Epitope_Rep1 1269.62748875241 1269.62638993586 31.701 2 -0.6357446843199905 0.1874462596732588 1.0 ['ENSG00000014164|ENST00000262577|ZC3H3', 'ZC3H3-PYCRL|1|fusion'] 49122 11023 KGEVHGINGT True PC9_epitope_Rep6 1010.5145076054998 1010.51340993586 53.302 2 -0.6357962197785307 0.18748729813810247 1.0 ['ENST00000480263.1_1_6:43593048-43593564:-|nuORF'] 81999 11565 PSSPYPSHSP True PC9_epitope_Rep4 1054.4719740871801 1054.47086993586 52.245 2 -0.6358153926445752 0.18748729813810247 1.0 ['ENST00000555997.1_1_14:69256147-69256228:-|nuORF'] 59389 16557 LGLKAELG True PC9_epitope_Rep1 799.4803539429099 799.47980496793 68.509 1 -0.63583347388022 0.1875 1.0 ['ENST00000417753.5_1_3:48557182-48594149:-|nuORF'] 28605 7106 FSQPTLVP True NCI_RA007_Epitope_Rep1 887.4752685624699 887.47416993586 31.633 2 -0.6358677305173238 0.1875097702047835 1.0 ['ENST00000325875.7_1_9:86595761-86614663:+|nuORF'] 75595 10307 NQQQHYLDVIK True H1975_Epitope_Rep1 1384.70991293676 1384.70880993586 44.59 2 -0.6358876204641937 0.1875097702047835 1.0 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 122455 6967 VGSLSLSAVAL True NCI_RA007_Epitope_Rep4 1015.59136094387 1015.59026993586 33.424 2 -0.6359205650386672 0.18756057148216462 1.0 ['ERMAP|p.P153L|1|0.36|ENSG00000164010|chr1:42835062-42835062|C/T|missense_variant'] 37546 19213 GYMEGYYTF True PC9_epitope_Rep6 1129.44264810485 1129.44207496793 86.555 1 -0.6359240722827406 0.18756057148216462 1.0 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 37977 4005 HEGKMKGCPV True NCI_RA007_Epitope_Rep2 1084.5157705587999 1084.5146699358602 20.216 2 -0.6359276174160273 0.18756057148216462 1.0 ['ENSG00000004961|ENST00000380762|HCCS'] 82456 16211 PVDNLVIK True PC9_epitope_Rep1 896.53311779176 896.53256496793 67.172 1 -0.63592937069573 0.18756057148216462 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 61573 18196 LLGPMDEPV True PC9_epitope_Rep1 969.4841189940099 969.48302993586 74.781 2 -0.6359515898687048 0.18756447528838038 1.0 ['ENSG00000103489|ENST00000261381|XYLT1'] 27916 6038 FQLWFHFKRYR True NCI_RA007_Epitope_Rep4 1626.8571863071397 1626.85555490379 29.842 3 -0.6359635612005686 0.18756447528838038 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 74934 19307 NLSYTQILKIR True PC9_epitope_Rep5 1347.78743498147 1347.78632993586 79.31 2 -0.6360108385899936 0.18756447528838038 1.0 ['ELMO1|p.E513Q|1|0.45|ENSG00000155849|chr7:36894918-36894918|C/G|missense_variant'] 125530 23572 VLVYGLHTEG True PC9_epitope_Rep2 1086.57095985246 1086.5698699358602 96.146 2 -0.636013042019644 0.18756447528838038 1.0 ['ENST00000372232.7_1_X:107372037-107374546:+|nuORF'] 19056 18563 ELGQARIRWEV True PC9_epitope_Rep1 1355.7309827345098 1355.72988993586 76.19 2 -0.6360358121915077 0.18757717376014005 1.0 ['ENST00000484500.5_1_3:125642769-125647435:+|nuORF'] 30346 6073 GAEATNVTGPG True H1975_Epitope_Rep3 972.4512386425998 972.4501499358599 28.372 2 -0.6360754235140726 0.1876025695128241 1.0 ['ENSG00000006047|ENST00000007699|YBX2'] 131724 17778 VWVWVCLRRRL True NCI_RA007_Epitope_Rep3 1484.8550781321599 1484.85343490379 77.946 3 -0.6360768055550161 0.1876025695128241 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 135414 9880 YDRYLKLW True NCI_RA007_Epitope_Rep3 1155.6076797143498 1155.60604490379 45.94 3 -0.6361513303214249 0.1877090431683911 1.0 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 93197 22957 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 94.754 2 -0.6361793666696216 0.1877285656237302 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 118872 5806 VEELRKTNASP True H1975_Epitope_Rep2 1242.65681473474 1242.6557099358602 27.323 2 -0.6362037222381369 0.1877285656237302 1.0 ['nc|ENSG00000108242|P33260-2|CYP2C18', 'ENSG00000108242|ENST00000285979|CYP2C18'] 25647 6063 FEWLGHFLY True NCI_RA007_Epitope_Rep1 1210.58113061334 1210.58002993586 27.623 2 -0.6362393041808229 0.1877285656237302 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.A1416Pfs*6|1|0.33|ENSG00000047936|chr6:117353065-117353065|C/-|frameshift_variant', 'ROS1|p.F1067Lfs*13|1|0.31|ENSG00000047936|chr6:117362783-117362783|A/-|frameshift_variant'] 128113 23179 VRRRRGAPGR True PC9_epitope_Rep2 1179.7173387893897 1179.71569490379 94.643 3 -0.636243459585641 0.1877285656237302 1.0 ['ENST00000306353.7_2_2:85828206-85829758:-|nuORF', 'ENST00000444380.5_1_2:85828554-85829758:-|nuORF'] 20757 20416 EQLIWKSEGLP True H1975_Epitope_Rep2 1298.68705223386 1298.6859499358602 84.594 2 -0.6363264512731261 0.18775395386634994 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 127221 13771 VQIEHISSL True PC9_epitope_Rep2 1024.5553097883198 1024.5542099358602 58.256 2 -0.6363303339473261 0.18775395386634994 1.0 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 3218 6475 AGEVFIHKDK True PC9_epitope_Rep6 1142.6084079903399 1142.6067749037902 33.553 3 -0.636397511537823 0.18776664739252058 1.0 ['nc|ENSG00000147140|Q15233-2|NONO', 'ENSG00000147140|ENST00000276079|NONO', 'ENST00000486613.6_1_X:70504267-70513876:+|nuORF'] 81669 28120 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 115.92 3 -0.6364480873811713 0.18780766045225109 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 27953 17831 FQRRALWVLAF True PC9_epitope_Rep6 1405.7982744486897 1405.7971699358602 81.217 2 -0.6364626642524722 0.18780766045225109 1.0 ['ENSG00000108684|ENST00000225823|ASIC2'] 32868 9348 GILDRTISV True PC9_epitope_Rep5 972.56039516876 972.55928993586 40.911 2 -0.6364770247055112 0.187820352544068 1.0 ['ENSG00000137767|ENST00000260324|SQOR'] 117369 20718 VAAVAQVEAL True PC9_epitope_Rep4 969.5494961318899 969.54838993586 87.855 2 -0.6365190180823914 0.18783010907272557 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 19599 10717 ELRKEISV True PC9_epitope_Rep3 972.5603951687599 972.55928993586 46.177 2 -0.6365361597772657 0.18783010907272557 1.0 ['ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 61185 15870 LLDLSHNSL True PC9_epitope_Rep4 1010.5396597241801 1010.53856993586 68.974 2 -0.6365847991502991 0.1878896788811626 1.0 ['ENSG00000168140|ENST00000304735|VASN'] 13310 8583 DLYQEWKEKVP True H1975_Epitope_Rep3 1433.7190806381298 1433.71798993586 38.006 2 -0.6366477966147251 0.18790236889805612 1.0 ['nc|ENSG00000137177|Q9H1H9-3|KIF13A', 'nc|ENSG00000137177|Q9H1H9-4|KIF13A', 'nc|ENSG00000137177|Q9H1H9-2|KIF13A', 'ENSG00000137177|ENST00000259711|KIF13A'] 109152 12126 TFNIWHSEW True PC9_epitope_Rep1 1218.54580773378 1218.54415490379 51.505 3 -0.6366819154369106 0.18791505851836804 1.0 ['ENST00000299980.8_2_16:71766447-71766639:-|nuORF'] 46286 13548 ITEGINEAVL True PC9_epitope_Rep1 1057.5655401188499 1057.56444993586 56.968 2 -0.6367029996845842 0.18795406608858684 1.0 ['ENSG00000169154|ENST00000307599|GOT1L1'] 77411 21575 NYLVRINEIK True PC9_epitope_Rep1 1260.71902106848 1260.7179299358602 87.81 2 -0.6367499097103868 0.18795406608858684 1.0 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant'] 71228 19221 MFVFKERWFWR True PC9_epitope_Rep1 1630.8231092975398 1630.82200993586 78.731 2 -0.6367539133408417 0.18795406608858684 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 130984 16489 VVKPVRKVQKV True H1975_Epitope_Rep2 1278.84997566838 1278.84832490379 68.643 3 -0.6367667295912213 0.18795406608858684 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 63535 18501 LPLAAAPSF True H1975_Epitope_Rep2 885.49600400705 885.4954549679301 76.766 1 -0.6367688313467467 0.18795406608858684 1.0 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF'] 113953 3181 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 18.219 3 -0.6367850638565491 0.18795406608858684 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 130403 8985 VTVPPDVFFF True NCI_RA007_Epitope_Rep5 1166.60119735158 1166.60010993586 41.218 2 -0.6368335681021846 0.18795406608858684 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 66579 9248 LSSNTLRAL True PC9_epitope_Rep6 973.5556441414899 973.55454993586 45.724 2 -0.6368663573467046 0.18795406608858684 1.0 ['ENSG00000176020|ENST00000320431|AMIGO3'] 113027 10143 TPTTPPAVAP True H1975_Epitope_Rep2 950.5072969667399 950.50618993586 44.014 2 -0.6369268146992818 0.18798237665218887 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 814 4470 ADALKHKS True NCI_RA007_Epitope_Rep4 868.4766655448001 868.47556993586 23.57 2 -0.6369634640619593 0.18799506303998 1.0 ['ENSG00000057663|ENST00000369076|ATG5', 'nc|ENSG00000057663|Q9H1Y0-2|ATG5', 'ENST00000476518.1_1_6:106649790-106727677:-|nuORF'] 99218 20997 SLAYPSESLI True PC9_epitope_Rep3 1078.55464108198 1078.55354993586 86.041 2 -0.637004023580037 0.18800481182333734 1.0 ['ENST00000293778.10_2_17:4636851-4637124:-|nuORF'] 42661 9600 IEVEKERLL True PC9_epitope_Rep3 1127.65502382959 1127.6533649037901 41.878 3 -0.6370089516698562 0.18800481182333734 1.0 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2', 'ENSG00000117868|ENST00000275418|ESYT2', 'nc|ENSG00000117868|A0FGR8-2|ESYT2', 'nc|ENSG00000117868|A0FGR8-4|ESYT2', 'NCAPG2-ESYT2|1|fusion'] 82277 13257 PTNLKPSKIKQ True NCI_RA007_Epitope_Rep5 1252.7503211967598 1252.74922993586 57.672 2 -0.6370467102818193 0.18801162282072112 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 80379 19274 PLGTQLSV True PC9_epitope_Rep1 813.45961849833 813.45852993586 78.94 2 -0.6370821760379202 0.18801162282072112 1.0 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3', 'CDCA3|p.E133Q|1|0.11|ENSG00000111665|chr12:6849712-6849712|C/G|missense_variant'] 40905 23626 HVSLPLHA True NCI_RA007_Epitope_Rep3 872.48683630568 872.48572993586 102.47 2 -0.6371173799997204 0.18801162282072112 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF'] 134336 8197 WRWVWSWEWAR True NCI_RA007_Epitope_Rep1 1646.7895006701401 1646.78785490379 35.882 3 -0.6371772583591874 0.18802430756252636 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 63574 9812 LPLIVKHIRK True NCI_RA007_Epitope_Rep5 1215.8179472641098 1215.81631490379 44.387 3 -0.6373064986916728 0.1880936015996001 1.0 ['ENSG00000179213|ENST00000601727|SIGLECL1'] 128618 13184 VSKYSQAVP True PC9_epitope_Rep3 977.5181960036098 977.51708993586 55.747 2 -0.6373188183023688 0.1880936015996001 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 59452 15625 LGNALIVVTI True PC9_epitope_Rep2 1011.63283183303 1011.63172993586 65.378 2 -0.6373515459334983 0.1880936015996001 1.0 ['ENSG00000166884|ENST00000300127|OR4D6', 'OR4D6|p.G152Vfs*9|1|0.31|ENSG00000166884|chr11:59457414-59457414|G/-|frameshift_variant', 'OR4D6|p.M281Cfs*2|2|0.3|ENSG00000166884|chr11:59457796-59457796|C/-|frameshift_variant'] 110290 9987 TIGSFLDSTSP True PC9_epitope_Rep1 1123.53971929383 1123.5386299358602 43.279 2 -0.6374921227701893 0.1881814489674779 1.0 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 98347 5211 SIGVVGVK True NCI_RA007_Epitope_Rep4 757.4697892592098 757.46868993586 26.579 2 -0.6374955044581649 0.1881814489674779 1.0 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 4706 4868 ALDSAWTAA True H1975_Epitope_Rep1 904.42904664604 904.4279499358599 23.803 2 -0.6375484784294155 0.18819119025304593 1.0 ['ENSG00000004848|ENST00000379044|ARX'] 128838 13498 VSSHVHTVTL True PC9_epitope_Rep5 1078.57710786206 1078.5760099358602 56.939 2 -0.6375682981788587 0.18819119025304593 1.0 ['nc|ENSG00000172236|Q15661-2|TPSAB1', 'ENSG00000197253|ENST00000606293|TPSB2', 'ENSG00000172236|ENST00000338844|TPSAB1'] 115895 4942 TVPESHQP True NCI_RA007_Epitope_Rep5 893.42429561877 893.42318993586 25.709 2 -0.6375941193969189 0.18820093092999282 1.0 ['ENST00000463889.5_1_9:35811007-35811933:-|nuORF'] 136769 20264 YIQDIILPT True PC9_epitope_Rep2 1074.5961119711399 1074.5950099358602 83.366 2 -0.6376003157858842 0.18820093092999282 1.0 ['nc|ENSG00000275052|Q5MIZ7-3|PPP4R3B', 'nc|ENSG00000275052|Q5MIZ7-2|PPP4R3B', 'ENSG00000275052|ENST00000616407|PPP4R3B'] 111924 15611 TLRVRCRRIF True PC9_epitope_Rep1 1318.7768278114597 1318.7751749037902 64.867 3 -0.6376272271840885 0.1882136107336426 1.0 ['ENST00000438676.1_1_6:75994738-75994903:+|nuORF'] 23471 4661 EVYFFQCRRDF True H1975_Epitope_Rep3 1508.6870693171998 1508.6859699358602 23.053 2 -0.637778963052374 0.18825458805154235 1.0 ['DZIP3|p.L867F|2|0.15|ENSG00000198919|chr3:108674089-108674089|A/T|missense_variant'] 113325 15399 TQIPPLTA True PC9_epitope_Rep4 839.47526856247 839.47416993586 67.164 2 -0.637819767454039 0.18825458805154235 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2', 'ECM2|p.F576Lfs*35|1|0.41|ENSG00000106823|chr9:92500930-92500930|A/-|frameshift_variant'] 23448 8425 EVWQENVP True PC9_epitope_Rep1 999.4661604307499 999.46506993586 37.242 2 -0.6378668903436285 0.18826726642301564 1.0 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 132064 14358 VYIHVESKL True PC9_epitope_Rep2 1086.60734536118 1086.6062499358602 60.49 2 -0.6379287644890143 0.18828968123818896 1.0 ['ENST00000323387.5_10:47416870-47420453:+|nuORF'] 129027 10292 VTAEDLHLEKE True H1975_Epitope_Rep1 1282.6404959642598 1282.6393899358602 44.532 2 -0.6379332437140308 0.18828968123818896 1.0 ['ENST00000515156.2_1_5:68927792-68932223:+|nuORF'] 85089 18001 QIQKVQVVV True PC9_epitope_Rep4 1039.6389798426296 1039.6378899358601 77.3 2 -0.6379496713175029 0.18828968123818896 1.0 ['ENSG00000143858|ENST00000367268|SYT2', 'ENSG00000067715|ENST00000261205|SYT1'] 133425 10871 WFWQDRFWLPP True PC9_epitope_Rep5 1576.7615545867998 1576.7599049037901 46.803 3 -0.6380615934079462 0.18839606434483835 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 4386 12160 AIRLELQGPR True PC9_epitope_Rep3 1151.6774906096698 1151.67583490379 51.81 3 -0.6380972236623121 0.18840579710144928 1.0 ['ENSG00000115053|ENST00000322723|NCL', 'ENST00000461347.5_1_2:232319904-232323320:-|nuORF'] 127751 25270 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 110.14 2 -0.6381084087060971 0.18840579710144928 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 110506 8113 TIQEYQRY True H1975_Epitope_Rep3 1099.52982331647 1099.5287299358602 36.183 2 -0.6381196716633788 0.1884155292500859 1.0 ['ENST00000555759.1_1_14:95918480-95934190:-|nuORF'] 3333 5432 AGHAVAGAALQ True NCI_RA007_Epitope_Rep3 964.50902830224 964.50792993586 28.378 2 -0.6381354908058007 0.1884155292500859 1.0 ['ENST00000571080.1_1_17:881865-882622:-|nuORF'] 107466 8233 SYYENDKSTTP True H1975_Epitope_Rep2 1303.5568259099498 1303.5557299358602 36.619 2 -0.6381564304483279 0.18842231834720552 1.0 ['ARAP2-PDS5A|1|fusion', 'ENSG00000047365|ENST00000303965|ARAP2'] 127172 7518 VQEWQNAIH True PC9_epitope_Rep5 1123.5410567065098 1123.53940490379 33.868 3 -0.6381792848294788 0.18842231834720552 1.0 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'ENST00000523028.5_1_16:21892164-21910369:-|nuORF', 'ENST00000309865.11_1_16:22482951-22501641:+|nuORF', 'ENST00000565246.6_2_16:70260671-70260800:-|nuORF', 'ENST00000566127.1_1_16:29540393-29548932:-|nuORF', 'ENST00000529428.5_1_16:30280378-30291878:-|nuORF'] 139710 18203 YTVKTDHLVLL True PC9_epitope_Rep6 1300.73908780672 1300.73798993586 82.658 2 -0.6382139690385731 0.18842231834720552 1.0 ['nc|ENSG00000120341|Q96JE7-2|SEC16B', 'ENSG00000120341|ENST00000308284|SEC16B', 'nc|ENSG00000120341|Q96JE7-3|SEC16B', 'ENST00000327037.8_1_1:177899723-177917737:-|nuORF', 'ENST00000464428.2_1_1:177898995-177929556:-|nuORF', 'ENST00000466953.6_1_1:177898995-177928232:-|nuORF'] 93199 23497 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 96.861 2 -0.6382451691921557 0.18843499172366407 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 8385 4117 ATPFQMFSP True H1975_Epitope_Rep2 1024.4688032830397 1024.46770993586 20.928 2 -0.6382820021489564 0.18846033728919426 1.0 ['ENST00000301785.5_1_11:62480620-62480758:-|nuORF'] 75550 9634 NQLLNVDLTK True H1975_Epitope_Rep1 1156.6451874218799 1156.6440899358602 41.985 2 -0.6383088007114502 0.18846033728919426 1.0 ['nc|ENSG00000173588|Q9Y592-2|CEP83', 'ENSG00000173588|ENST00000397809|CEP83'] 46931 8843 IVLKDNDFL True H1975_Epitope_Rep1 1075.59136094387 1075.59026993586 38.937 2 -0.6383258237259097 0.18848568127166546 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2'] 30735 13907 GANKVIEGL True PC9_epitope_Rep5 899.5076313199098 899.50652993586 58.513 2 -0.6383516505373296 0.18848568127166546 1.0 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 70265 22544 LYNLPAEIPC True PC9_epitope_Rep5 1131.56343194387 1131.56287496793 91.721 1 -0.6383809243167056 0.18849835266930032 1.0 ['ENSG00000128274|ENST00000642412|A4GALT'] 123637 15542 VILPFFFP True PC9_epitope_Rep1 978.5578759876199 978.55676993586 64.607 2 -0.6384021731270787 0.18850808025606994 1.0 ['ENST00000475385.1_1_13:29275636-29278315:-|nuORF'] 108627 18216 TEKEVEIL True PC9_epitope_Rep1 959.5175272972698 959.51642993586 74.859 2 -0.6384266889107799 0.18850808025606994 1.0 ['ENSG00000139163|ENST00000266517|ETNK1', 'nc|ENSG00000139163|Q9HBU6|ETNK1'] 82824 8128 PVSPVAPR True PC9_epitope_Rep1 821.47593726881 821.47484993586 36.093 2 -0.6384529684893974 0.18851486385211091 1.0 ['ENST00000446816.1_1_2:96874348-96906424:+|nuORF'] 16555 15900 EEQLNHLLL True PC9_epitope_Rep5 1107.59242357303 1107.5913299358601 66.149 2 -0.6384941875505654 0.18851486385211091 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-2|DMD', 'DMD|p.L2333F|1|0.6|ENSG00000198947|chrX:31875289-31875289|G/A|missense_variant'] 137324 16138 YLIKDIRFL True PC9_epitope_Rep5 1179.7015800991899 1179.6999449037899 67.063 3 -0.638505040833032 0.18851486385211091 1.0 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000466614.1_1_22:30983271-30987820:-|nuORF'] 55962 15540 LDIDPKLQEY True H1975_Epitope_Rep3 1232.6288686514 1232.6277699358602 65.192 2 -0.6386236261085791 0.1885997096064074 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 110309 19615 TIHTHLEDL True PC9_epitope_Rep1 1077.54547338061 1077.54436993586 80.276 2 -0.6386737107650734 0.1885997096064074 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN'] 44550 7743 IPAVEGQW True NCI_RA007_Epitope_Rep3 898.45486747106 898.45376993586 37.579 2 -0.6387304841606295 0.1885997096064074 1.0 ['ENST00000353704.2_2_9:35732632-35732818:+|nuORF'] 16914 4699 EGDGWLKSFQR True NCI_RA007_Epitope_Rep2 1321.64149902377 1321.6398449037902 22.905 3 -0.6387651701695134 0.1886123774433273 1.0 ['nc|ENSG00000230223|P0DMR3|ATXN8OS'] 24702 16144 FAVFHPHFVL True PC9_epitope_Rep5 1212.64439957624 1212.64276490379 67.086 3 -0.6387980748187018 0.18864065695595836 1.0 ['ENSG00000147262|ENST00000682440|GPR119'] 126937 11818 VPVHDIYVSQ True PC9_epitope_Rep5 1155.59242357303 1155.5913299358601 50.454 2 -0.6388078623179364 0.18865037858090702 1.0 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 55404 18503 LASVVALTT True PC9_epitope_Rep4 873.5171333744499 873.51602993586 79.244 2 -0.6388299883993409 0.18865037858090702 1.0 ['ENSG00000125522|ENST00000684052|NPBWR2'] 124550 7042 VLGKVVGL True NCI_RA007_Epitope_Rep4 783.5218248320699 783.52072993586 33.713 2 -0.6390218303903029 0.18869426751592358 1.0 ['ENST00000572067.1_1_16:67916382-67916877:+|nuORF'] 87601 10928 QTRSRWRHLEI True PC9_epitope_Rep3 1480.801127983 1480.79947490379 47.015 3 -0.6390486314557154 0.18870693288789672 1.0 ['ENST00000313431.13_2_1:144932113-144932161:-|nuORF'] 42683 11834 IEVPNNQHVK True PC9_epitope_Rep3 1176.6251206836403 1176.62402993586 50.539 2 -0.6390702064745434 0.18871959786443535 1.0 ['ENSG00000149418|ENST00000278742|ST14', 'ENST00000524718.5_1_11:130059967-130066600:+|nuORF'] 81474 19144 PQPDVFPLF True NCI_RA007_Epitope_Rep4 1058.54368247546 1058.5425899358602 82.784 2 -0.6391475044104309 0.18876053699656573 1.0 ['AATF|p.V505Sfs*3|1|0.38|ENSG00000275700|chr17:37020973-37020974|-/A|frameshift_variant', 'ENSG00000275700|ENST00000619387|AATF'] 12825 8436 DLKKMLENK True NCI_RA007_Epitope_Rep2 1117.6165301458898 1117.6154299358602 37.455 2 -0.6392186626659865 0.18876053699656573 1.0 ['ENSG00000171806|ENST00000310392|METTL18'] 83476 8547 QDFYWEAEWQ True H1975_Epitope_Rep2 1400.567331024 1400.56567490379 37.831 3 -0.6392263834542966 0.18878881066483508 1.0 ['nc|ENSG00000188566|Q9UHB4-3|NDOR1', 'nc|ENSG00000188566|Q9UHB4-4|NDOR1', 'ENSG00000188566|ENST00000684003|NDOR1', 'nc|ENSG00000188566|Q9UHB4-2|NDOR1'] 133363 3701 WFHFKRYRYRR True NCI_RA007_Epitope_Rep2 1713.9116814914898 1713.91003490379 19.043 3 -0.6392591200672564 0.1888002746866855 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 85300 25292 QKVWKRWKKRY True PC9_epitope_Rep6 1604.9415846374395 1604.9399249037901 112.67 3 -0.639351961321737 0.1888002746866855 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 134497 23446 WVALRRRH True PC9_epitope_Rep6 1092.64171423764 1092.6411749679298 103.29 1 -0.6394010667401269 0.1888002746866855 1.0 ['ENSG00000135722|ENST00000258200|FBXL8'] 19484 5739 ELQESSYSCE True H1975_Epitope_Rep3 1173.4495839600897 1173.4484899358602 27.102 2 -0.639405937209794 0.1888002746866855 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 115592 9209 TVIEALQAPP True H1975_Epitope_Rep2 1037.5757108797297 1037.57460993586 40.376 2 -0.6394643363906443 0.1888002746866855 1.0 ['ENST00000463471.6_1_1:2494574-2494709:+|nuORF', 'ENST00000480305.1_1_1:2493254-2494709:+|nuORF', 'nc|ENSG00000157873|Q92956-2|TNFRSF14', 'ENST00000463835.5_1_1:2492021-2494709:+|nuORF', 'ENST00000475523.5_1_1:2490981-2494709:+|nuORF', 'ENSG00000157873|ENST00000355716|TNFRSF14'] 57091 8559 LEELKWKK True PC9_epitope_Rep4 1072.62808080576 1072.6269899358601 40.402 2 -0.6394766100778511 0.1888002746866855 1.0 ['ENSG00000124557|ENST00000684113|BTN1A1'] 30716 7583 GALTGTPPSLP True PC9_epitope_Rep1 1009.5444107514498 1009.54330993586 33.987 2 -0.6394989214378202 0.1888002746866855 1.0 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'ENST00000563314.5_1_16:28846803-28847583:+|nuORF'] 65517 12692 LSFVLYFTVP True PC9_epitope_Rep5 1184.648147544 1184.6470499358602 53.825 2 -0.6394992256433457 0.1888002746866855 1.0 ['ENSG00000185052|ENST00000328041|SLC24A3'] 17057 5047 EGPKLYQDYF True NCI_RA007_Epitope_Rep2 1258.5870038394198 1258.5859099358602 24.256 2 -0.6395028236657777 0.1888002746866855 1.0 ['ENST00000560291.2_1_15:52152484-52153489:-|nuORF'] 88175 16077 QWTSRKRK True NCI_RA007_Epitope_Rep5 1088.6203100867199 1088.61920993586 68.57 2 -0.6395049564640722 0.1888002746866855 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 81701 18826 PRVWSRLLGT True PC9_epitope_Rep5 1183.6825759901099 1183.68094490379 77.429 3 -0.6395174891559939 0.1888002746866855 1.0 ['ENST00000608694.1_1_7:129246743-129246839:-|nuORF'] 29165 4666 FTWDKWLK True NCI_RA007_Epitope_Rep2 1122.58621599378 1122.5845649037901 22.775 3 -0.6395181471252275 0.1888002746866855 1.0 ['ENSG00000111684|ENST00000261407|LPCAT3', 'LRRC23-LPCAT3|1|fusion', 'ENST00000535479.5_1_12:7086310-7087113:-|nuORF', 'nc|ENSG00000111684|Q6P1A2-2|LPCAT3'] 29485 3340 FVIFFFFFWYF True NCI_RA007_Epitope_Rep1 1608.7845814471596 1608.78237987172 16.886 4 -0.6395472724027291 0.18880998829496684 1.0 ['ENST00000316423.10_1_4:39501678-39501759:-|nuORF'] 1462 5821 AEELKFKWEN True NCI_RA007_Epitope_Rep1 1292.6401020414398 1292.63845490379 26.697 3 -0.6396117906100552 0.18880998829496684 1.0 ['nc|ENSG00000197057|Q6ZMT9-2|DTHD1', 'nc|ENSG00000197057|Q6ZMT9|DTHD1', 'ENSG00000197057|ENST00000639862|DTHD1'] 41487 19042 ICFFIMGFP True NCI_RA007_Epitope_Rep2 1073.50783164405 1073.5067299358602 78.921 2 -0.6397049882245633 0.18886357252099004 1.0 ['nc|ENSG00000165970|Q9Y345-2|SLC6A5', 'nc|ENSG00000165970|Q9Y345-3|SLC6A5', 'ENSG00000165970|ENST00000525748|SLC6A5'] 104590 4849 SSSSTATTGPP True PC9_epitope_Rep1 991.44581890899 991.44472993586 23.52 2 -0.6397054438599586 0.18886357252099004 1.0 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-15|NR3C1', 'nc|ENSG00000113580|P04150-14|NR3C1', 'nc|ENSG00000113580|P04150-5|NR3C1', 'nc|ENSG00000113580|P04150-13|NR3C1', 'nc|ENSG00000113580|P04150-12|NR3C1', 'nc|ENSG00000113580|P04150-11|NR3C1', 'nc|ENSG00000113580|P04150-8|NR3C1', 'nc|ENSG00000113580|P04150-10|NR3C1', 'nc|ENSG00000113580|P04150-16|NR3C1'] 73298 21376 NEKFYGVTVF True PC9_epitope_Rep2 1202.5971746003 1202.5960699358602 87.692 2 -0.6397081180895429 0.18886357252099004 1.0 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'P3H1|p.F627Lfs*4|1|0.68|ENSG00000117385|chr1:42747755-42747756|AA/-|frameshift_variant', 'ENST00000460031.5_1_1:43212370-43220777:-|nuORF', 'ENST00000481465.3_1_1:43215737-43220567:-|nuORF'] 25374 21026 FEIFKEHFS True PC9_epitope_Rep1 1182.5709598524597 1182.5698699358602 85.704 2 -0.6397189843326463 0.1888732833957553 1.0 ['ENSG00000119285|ENST00000366582|HEATR1'] 19043 19613 ELGNYVIKI True PC9_epitope_Rep1 1047.59644632431 1047.5953499358602 80.271 2 -0.6397345851021174 0.1888732833957553 1.0 ['ENSG00000163872|ENST00000305135|YEATS2', 'ENST00000497765.1_1_3:183515808-183519351:+|nuORF'] 45444 11167 ISEAWIKAI True PC9_epitope_Rep6 1029.5858816406098 1029.58478993586 53.905 2 -0.6397716289179063 0.18889270332688346 1.0 ['ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2', 'nc|ENSG00000144554|Q9BXW9-3|FANCD2', 'ENST00000438698.1_1_3:10029596-10035934:+|nuORF'] 91194 23467 RLQLPRLRVRE True NCI_RA007_Epitope_Rep4 1434.8895490645798 1434.88844993586 101.84 2 -0.6397977288105092 0.18889270332688346 1.0 ['nc|ENSG00000105227|Q9BXM0-3|PRX', 'PRX|p.E1262Afs*109|2|0.44|ENSG00000105227|chr19:40394534-40394567|CAGAAGGTACGCTCGGCCCCTGGGGGCTGCTCCT/-|frameshift_variant', 'ENST00000291825.11_2_19:40899875-40904000:-|nuORF', 'ENSG00000105227|ENST00000324001|PRX'] 132067 15204 VYIHVESKL True PC9_epitope_Rep5 1086.60734536118 1086.6062499358602 63.491 2 -0.6397996209677267 0.18889270332688346 1.0 ['ENST00000323387.5_10:47416870-47420453:+|nuORF'] 103084 9442 SQLKKFYNQ True PC9_epitope_Rep4 1154.6084079903399 1154.60730993586 43.93 2 -0.6398504708153093 0.18889270332688346 1.0 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.H695Tfs*6|1|0.19|ENSG00000151655|chr10:7738744-7738745|-/A|frameshift_variant', 'ITIH2|p.T482M|1|0.08|ENSG00000151655|chr10:7730117-7730117|C/T|missense_variant'] 126327 5960 VPKHQCGRC True PC9_epitope_Rep3 1026.4851391368597 1026.4840499358602 27.982 2 -0.6399153406491901 0.18890241238335986 1.0 ['nc|ENSG00000180329|Q96MW1-2|CCDC43'] 120055 16787 VFFFNFFF True PC9_epitope_Rep5 1113.5323895157699 1113.53128993586 69.577 2 -0.6399269770997073 0.18890241238335986 1.0 ['ENST00000446464.7_1_2:85584040-85584214:+|nuORF'] 15472 7050 EAPSLRPAPP True H1975_Epitope_Rep2 1033.55564414149 1033.5545499358602 32.044 2 -0.6400507801933162 0.18895893146922982 1.0 ['ENSG00000171564|ENST00000302068|FGB'] 80350 13425 PLGGLGPGE True PC9_epitope_Rep5 795.41266830591 795.41156993586 56.655 2 -0.6400585272945452 0.18895893146922982 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 61515 5031 LLGAAHRL True H1975_Epitope_Rep1 849.51847078713 849.51736993586 24.421 2 -0.640072101683806 0.18896863785301918 1.0 ['ENSG00000105135|ENST00000263383|ILVBL', 'ENST00000599324.1_1_19:15235627-15235870:-|nuORF'] 105647 9303 SVFLRRRYQ True PC9_epitope_Rep1 1223.68872399971 1223.68708490379 40.638 3 -0.6400878056763385 0.18896863785301918 1.0 ['ZDBF2|p.H2236R|1|0.4|ENSG00000204186|chr2:206311235-206311235|A/G|missense_variant'] 123143 10423 VHEIDEDSPLY True H1975_Epitope_Rep2 1315.59321141867 1315.5921099358602 45.105 2 -0.6401177619811347 0.18898129222511742 1.0 ['ENSG00000123700|ENST00000243457|KCNJ2', 'ENSG00000168135|ENST00000303592|KCNJ4'] 16597 5492 EERQQWESRER True H1975_Epitope_Rep1 1531.7127664710695 1531.71166993586 26.186 2 -0.6401581626351756 0.18899394620233415 1.0 ['DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-3|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 45707 12222 ISLNISPL True PC9_epitope_Rep2 855.50656869075 855.50546993586 52.325 2 -0.6401976259290127 0.1890192529721971 1.0 ['chr7:50504059-50513259|115|12.32|0.0|20.23|-|2|TE_info:L1PB1,L1PB1_dup5738,L1,LINE,donor,+,50513259,50517927|DDC,None|51'] 115747 13775 TVLNLHQHLK True PC9_epitope_Rep6 1201.6931406738101 1201.69150490379 64.787 3 -0.6402072198096649 0.1890192529721971 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'ENST00000557060.1_1_14:64540716-64565614:+|nuORF'] 82423 8289 PVATVKYT True PC9_epitope_Rep6 877.4909186266099 877.48982993586 41.498 2 -0.6402411667736568 0.18906310944691473 1.0 ['nc|ENSG00000182333|P07098-2|LIPF', 'nc|ENSG00000182333|P07098-4|LIPF', 'ENSG00000182333|ENST00000238983|LIPF', 'nc|ENSG00000182333|P07098-3|LIPF'] 15372 7276 EALLERESA True H1975_Epitope_Rep2 1016.51383889916 1016.51274993586 32.924 2 -0.6402632264883762 0.18907576135796306 1.0 ['nc|ENSG00000138031|O60266-2|ADCY3', 'ENSG00000138031|ENST00000679454|ADCY3'] 135858 7691 YEQVDLVGK True H1975_Epitope_Rep1 1049.5393253710097 1049.53822993586 34.549 2 -0.64027833347231 0.18908546288495742 1.0 ['ENSG00000107625|ENST00000373585|DDX50'] 57766 14266 LENVHMLY True PC9_epitope_Rep5 1017.49535238405 1017.49424993586 59.878 2 -0.640284065734082 0.18908546288495742 1.0 ['nc|ENSG00000089123|Q9H6P5-3|TASP1', 'ENST00000480436.5_1_20:13415759-13610725:-|nuORF'] 462 8458 AAMERQLI True NCI_RA007_Epitope_Rep5 930.4956867372198 930.49458993586 39.215 2 -0.6402972622454527 0.18909811385513034 1.0 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1', 'ENST00000507232.5_1_5:169018105-169028825:+|nuORF'] 35672 8867 GTMWVWTL True NCI_RA007_Epitope_Rep3 992.47897404392 992.47786993586 41.969 2 -0.640339428108606 0.18911076443057723 1.0 ['ENST00000495718.5_1_1:59787216-59811973:+|nuORF'] 72225 13838 MRWRWWQRLLP True H1975_Epitope_Rep3 1626.8717908254598 1626.8706899358601 58.536 2 -0.6403693853223913 0.1891331138948255 1.0 ['ENSG00000176410|ENST00000395176|DNAJC30'] 10975 5191 DC[Carbamidomethyl]QEC[Carbamidomethyl]PEGYR True NCI_RA007_Epitope_Rep1 1312.4812360837398 1312.48012993586 24.275 2 -0.6403943522725096 0.1891331138948255 1.0 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153577219-153578780:-|nuORF'] 81675 28681 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 119.04 3 -0.6404260907427769 0.1891331138948255 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 20640 10815 EQFSFVEYCPP True H1975_Epitope_Rep3 1344.5696395231198 1344.5685499358601 46.679 2 -0.6404400527300971 0.18914576313490578 1.0 ['ENSG00000189319|ENST00000337318|FAM53B', 'nc|ENSG00000189319|Q14153-2|FAM53B', 'ENST00000494792.1_1_10:126307332-126395327:-|nuORF'] 110758 24879 TKKRKRRRRRS True PC9_epitope_Rep2 1526.9818267399799 1526.9807299358602 101.37 2 -0.6404664202612615 0.18915841198034475 1.0 ['nc|ENSG00000028310|Q9H8M2-6|BRD9', 'ENST00000467963.5_3_5:889215-891867:-|nuORF'] 60848 11899 LKLLPHQP True NCI_RA007_Epitope_Rep3 944.5807366905201 944.57962993586 53.94 2 -0.6405177989169021 0.18918370848737268 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000215859|A8MUH7-2|PDZK1P1', 'nc|ENSG00000215859|A8MUH7|PDZK1P1'] 80864 15071 PLVNVAPE True PC9_epitope_Rep5 837.45961849833 837.45852993586 62.977 2 -0.6405297807400161 0.18918370848737268 1.0 ['ENSG00000206107|ENST00000382835|KRTAP27-1'] 80762 15077 PLSFLCRR True H1975_Epitope_Rep3 990.5433056359799 990.54220993586 63.389 2 -0.6405667159984507 0.18922460184997425 1.0 ['ENST00000491547.1_1_1:14925308-14925407:+|nuORF'] 130286 18486 VTTDLYQV True PC9_epitope_Rep4 937.47566248529 937.47456993586 79.179 2 -0.6405732447498658 0.18922460184997425 1.0 ['nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6', 'ENST00000547260.5_1_12:49162376-49164981:-|nuORF'] 25473 12183 FENLDQQLR True NCI_RA007_Epitope_Rep2 1161.5778361380499 1161.5767299358602 51.986 2 -0.6406282731605296 0.1892528466697863 1.0 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 86435 6067 QQQSQASEI True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 28.732 2 -0.6406623384429126 0.18928109060847592 1.0 ['ENSG00000151773|ENST00000444614|CCDC122', 'nc|ENSG00000151773|Q5T0U0-2|CCDC122', 'ENST00000476570.2_1_13:44430578-44443512:-|nuORF'] 64985 11480 LSDELVAKIFS True NCI_RA007_Epitope_Rep1 1220.66525416012 1220.66414993586 48.619 2 -0.6406839545493205 0.1892937359620664 1.0 ['chr3:195086022-195087933|373|11.99|0.24|5.62|-|2|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|8', 'chr3:195070111-195088018|311|10.27|0.09|6.77|-|0|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195088018,195093677|XXYLT1,None|8', 'chr3:195070111-195087933|359|13.86|0.27|5.66|-|2|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|8'] 39902 10919 HQLELKFER True PC9_epitope_Rep6 1198.64585612822 1198.64422490379 52.866 3 -0.6407817802669191 0.1893034282683969 1.0 ['nc|ENSG00000188659|Q658L1-2|SAXO2', 'nc|ENSG00000188659|Q658L1|SAXO2', 'ENSG00000188659|ENST00000682753|SAXO2'] 28481 6947 FSEVESILNQ True H1975_Epitope_Rep3 1164.5662683948399 1164.56516993586 31.683 2 -0.6407849879284013 0.1893034282683969 1.0 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 71492 12019 MKLKTVASVF True PC9_epitope_Rep1 1122.6471019981798 1122.64546490379 51.093 3 -0.6408343361827924 0.1893160726818997 1.0 ['ENSG00000144891|ENST00000349243|AGTR1'] 81568 23785 PRIRYRKKKRI True NCI_RA007_Epitope_Rep3 1512.9841181557597 1512.98248490379 103.09 3 -0.6408999048019812 0.18934431343190467 1.0 ['nc|ENSG00000079263|Q13342-3|SP140', 'nc|ENSG00000079263|Q13342-6|SP140', 'nc|ENSG00000079263|Q13342-5|SP140', 'ENSG00000079263|ENST00000392045|SP140'] 93167 19265 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 79.958 2 -0.6409247756731457 0.18937255330099662 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 99012 25249 SKNVRTILIEI True PC9_epitope_Rep2 1284.7765359446 1284.7759749679299 102.79 1 -0.6409381420046716 0.18937633536594875 1.0 ['ENST00000231498.7_1_5:37291884-37291974:-|nuORF'] 60898 21433 LKRRIWRMPLF True NCI_RA007_Epitope_Rep2 1514.9020283245798 1514.9009299358602 88.697 2 -0.6409603436888816 0.18937633536594875 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 117817 9432 VANKIESIP True PC9_epitope_Rep2 969.5494961318899 969.54838993586 41.619 2 -0.6409774018349814 0.18937633536594875 1.0 ['ENSG00000163564|ENST00000368140|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-3|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-5|PYHIN1'] 124337 9558 VLDQYNKKPA True NCI_RA007_Epitope_Rep5 1174.63462273818 1174.63352993586 43.404 2 -0.6409933172765877 0.18937633536594875 1.0 ['ENST00000478171.1_1_3:48450818-48451478:-|nuORF'] 111537 16827 TLLSVKLQV True PC9_epitope_Rep1 999.6328318330299 999.63172993586 69.549 2 -0.6411284595149679 0.18942985465660284 1.0 ['ENST00000548159.5_2_12:70637993-70671955:+|nuORF'] 98213 12582 SIEAEVDPPSD True H1975_Epitope_Rep2 1157.5088130883698 1157.50770993586 53.492 2 -0.6411306970427635 0.18942985465660284 1.0 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'COL12A1|p.D221Gfs*4|1|0.16|ENSG00000111799|chr6:75189378-75189379|-/C|frameshift_variant'] 125743 15613 VNFSQDPDV True PC9_epitope_Rep4 1019.4559896698698 1019.45488993586 67.979 2 -0.6411326735809078 0.18942985465660284 1.0 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|12|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|19|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|17|fusion', 'CLTC-VMP1|4|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|5|fusion', 'nc|ENSG00000141367|Q00610-2|CLTC', 'ENSG00000141367|ENST00000269122|CLTC', 'ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 83930 6630 QEKMAHVEELR True H1975_Epitope_Rep1 1368.6819839367597 1368.68032490379 30.558 3 -0.641162031956926 0.18944249512670566 1.0 ['ZC4H2|p.I151Sfs*36|1|0.36|ENSG00000126970|chrX:64919153-64919153|G/-|frameshift_variant', 'nc|ENSG00000126970|Q9NQZ6-3|ZC4H2', 'nc|ENSG00000126970|Q9NQZ6-5|ZC4H2', 'ENSG00000126970|ENST00000374839|ZC4H2', 'nc|ENSG00000126970|Q9NQZ6-2|ZC4H2', 'ENST00000488608.5_1_X:64139959-64196305:-|nuORF', 'ENST00000492653.5_1_X:64139109-64196305:-|nuORF', 'nc|ENSG00000126970|Q9NQZ6-4|ZC4H2'] 127747 24925 VRKERKRHKT True NCI_RA007_Epitope_Rep4 1336.81638412432 1336.8152899358602 108.45 2 -0.641222073616602 0.18947072950129432 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 112930 18472 TPQSYETLE True PC9_epitope_Rep5 1066.4818700645399 1066.48076993586 76.074 2 -0.6412295427582235 0.18948041417165667 1.0 ['ENSG00000130775|ENST00000373921|THEMIS2', 'nc|ENSG00000130775|Q5TEJ8-2|THEMIS2', 'nc|ENSG00000130775|Q5TEJ8-6|THEMIS2', 'nc|ENSG00000130775|Q5TEJ8-3|THEMIS2', 'nc|ENSG00000130775|Q5TEJ8-5|THEMIS2'] 122033 10496 VGQPAVAGLS True PC9_epitope_Rep3 897.4919812557699 897.4914349679301 45.312 1 -0.6412374328318836 0.18948041417165667 1.0 ['ENST00000470411.2_1_16:624643-626255:+|nuORF'] 93190 21773 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 90.059 2 -0.6412843127578792 0.189487143503142 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 60591 9830 LISFAQWQFWD True H1975_Epitope_Rep1 1439.6873865870298 1439.68628993586 42.74 2 -0.6412908435698338 0.189487143503142 1.0 ['ENST00000461449.5_1_1:111662535-111662574:-|nuORF'] 39321 10116 HLRSRQLLYDE True NCI_RA007_Epitope_Rep2 1428.74736107464 1428.74626993586 43.936 2 -0.6412955102689191 0.189487143503142 1.0 ['ENST00000529712.5_1_11:47690447-47736202:-|nuORF', 'AGBL2|p.K752Efs*6|1|0.53|ENSG00000165923|chr11:47667658-47667659|-/T|frameshift_variant', 'ENSG00000165923|ENST00000525123|AGBL2'] 20287 17247 EPAIQGVLD True PC9_epitope_Rep3 940.4865615221598 940.48546993586 71.491 2 -0.6413551631883005 0.18949978170024326 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 128161 25436 VRSKGRKF True PC9_epitope_Rep5 976.5930327097199 976.5924849679301 103.07 1 -0.6413705711746802 0.18950650970608873 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 97307 8124 SFSELYTLS True NCI_RA007_Epitope_Rep1 1045.49679185269 1045.4956899358601 35.598 2 -0.6413764278018239 0.18950650970608873 1.0 ['ENSG00000213445|ENST00000534313|SIPA1'] 58190 9495 LESLVLKLS True H1975_Epitope_Rep1 1000.61684741572 1000.61574993586 41.443 2 -0.6413852407186363 0.18950650970608873 1.0 ['nc|ENSG00000165458|O15357-2|INPPL1', 'ENSG00000165458|ENST00000298229|INPPL1', 'INPPL1|p.S980Nfs*4|2|0.11|ENSG00000165458|chr11:72237183-72237183|G/AT|frameshift_variant', 'INPPL1|p.W888*|1|0.53|ENSG00000165458|chr11:72235678-72235678|G/-|frameshift_variant', 'INPPL1|p.I889Tfs*69|1|0.57|ENSG00000165458|chr11:72235681-72235681|T/-|frameshift_variant', 'INPPL1|p.S980Kfs*4|2|0.19|ENSG00000165458|chr11:72237181-72237182|-/A|frameshift_variant'] 70243 9857 LYMKNGQGF True PC9_epitope_Rep4 1056.5062514209196 1056.5051499358601 45.565 2 -0.6413920986062678 0.18951914681302232 1.0 ['nc|ENSG00000127314|P61224-4|RAP1B', 'ENST00000494982.1_1_1:112233982-112249293:+|nuORF', 'nc|ENSG00000127314|P61224-3|RAP1B', 'nc|ENSG00000254893|A6NIZ1|RAP1BL', 'ENSG00000127314|ENST00000250559|RAP1B', 'ENSG00000116473|ENST00000369709|RAP1A'] 101792 10394 SPIENIQRV True PC9_epitope_Rep4 1054.57710786206 1054.57657496793 47.682 1 -0.6414800256604644 0.18957855839842835 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF', 'ENST00000465552.1_1_3:41275683-41277995:+|nuORF'] 82868 10929 PVVGLPRRLR True NCI_RA007_Epitope_Rep5 1161.7458449530097 1161.7441949037902 48.678 3 -0.6415361794415944 0.18959119398796345 1.0 ['ENSG00000162851|ENST00000366514|TFB2M'] 77832 13100 PAGAIAPLG True PC9_epitope_Rep4 765.43848913093 765.4379449679301 58.283 1 -0.641540975819155 0.1896038291834921 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 65928 8003 LSLKKCPM True PC9_epitope_Rep5 918.5030806167799 918.50198993586 35.722 2 -0.6415595142604821 0.18961350774075864 1.0 ['ENSG00000136631|ENST00000644510|VPS45'] 65554 5166 LSGEEISYT True H1975_Epitope_Rep3 997.46040634397 997.45930993586 24.971 2 -0.6415763115464156 0.18961350774075864 1.0 ['ENSG00000104331|ENST00000262644|BPNT2'] 63304 6197 LPCPLTPDPQP True H1975_Epitope_Rep3 1176.58489566444 1176.58324490379 28.85 3 -0.6416159413238421 0.1896143173385714 1.0 ['ENST00000415602.5_3_20:62694892-62695267:+|nuORF'] 16826 16143 EFPRFVRVWWR True H1975_Epitope_Rep1 1576.8415362429998 1576.8404299358601 67.437 2 -0.6416347362941384 0.1896143173385714 1.0 ['ENST00000477680.5_1_7:4815294-4829561:+|nuORF', 'ENST00000348624.4_1_7:4815294-4820850:+|nuORF'] 35515 17650 GTHALAHP True H1975_Epitope_Rep2 802.4085859849799 802.40748993586 73.211 2 -0.6416475307618054 0.1896143173385714 1.0 ['ENST00000505551.5_1_4:1838279-1843155:-|nuORF'] 63550 19772 LPLARGRRDP True H1975_Epitope_Rep2 1149.6730739355698 1149.67196993586 82.027 2 -0.6416961257393136 0.1896143173385714 1.0 ['ENST00000298292.12_1_14:50100549-50100927:-|nuORF'] 5882 5525 APGSAKSLT True PC9_epitope_Rep4 830.44978209062 830.44868993586 28.017 2 -0.6417336535673528 0.1896143173385714 1.0 ['nc|ENSG00000165626|Q8N7W2-3|BEND7'] 60899 20501 LKRRIWRMPLF True NCI_RA007_Epitope_Rep4 1514.9020283245798 1514.9009299358602 88.775 2 -0.6417550009055466 0.1896425397914166 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 134606 20742 WWDIYYTLFEK True PC9_epitope_Rep2 1562.7445671099797 1562.74346993586 85.224 2 -0.6417884128819472 0.1896551724137931 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 98718 16441 SIRPSWSSSTL True PC9_epitope_Rep2 1219.61970095003 1219.6186099358601 68.482 2 -0.6418188905983668 0.1896678046423171 1.0 ['ENST00000575712.5_1_17:79009028-79031686:+|nuORF'] 119974 16035 VEYVVYTDDP True PC9_epitope_Rep1 1198.5393849406598 1198.5382899358601 66.491 2 -0.6418632329857092 0.18969306791788124 1.0 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2'] 54888 11330 LAGLSALPVS True PC9_epitope_Rep6 926.54368247546 926.54258993586 54.606 2 -0.6418725791967869 0.18969306791788124 1.0 ['ENSG00000061455|ENST00000407847|PRDM6'] 3671 12840 AGRLMAWYY True PC9_epitope_Rep1 1129.53788590237 1129.53678993586 54.263 2 -0.6419041282245647 0.18970650123914773 1.0 ['nc|ENSG00000162669|A2PYH4-2|HFM1', 'ENST00000462405.5_1_1:91728075-91813019:-|nuORF', 'HFM1|p.N1390Kfs*6|1|0.32|ENSG00000162669|chr1:91262315-91262316|-/A|frameshift_variant', 'ENSG00000162669|ENST00000370425|HFM1'] 71498 8488 MKMHLQRALVV True PC9_epitope_Rep6 1324.7471674759602 1324.74553490379 42.364 3 -0.6419113605910645 0.18970650123914773 1.0 ['nc|ENSG00000119699|P10600-2|TGFB3', 'ENSG00000119699|ENST00000238682|TGFB3'] 66945 4714 LSYNSDVVSGR True NCI_RA007_Epitope_Rep2 1195.5833154413099 1195.5822099358602 22.963 2 -0.6419264975535238 0.18970650123914773 1.0 ['nc|ENSG00000136925|Q5T7W7-2|TSTD2', 'ENST00000375165.5_1_9:100366979-100380093:-|nuORF'] 32980 16823 GIVALSCWL True PC9_epitope_Rep1 960.5102741722 960.50916993586 69.535 2 -0.6419826734323603 0.18970650123914773 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 129098 7882 VTATSTHISP True H1975_Epitope_Rep3 1012.5189242796 1012.51782993586 35.296 2 -0.6420126976132235 0.18970650123914773 1.0 ['nc|ENSG00000031003|Q9NYF5-2|FAM13B', 'nc|ENSG00000031003|Q9NYF5|FAM13B', 'ENSG00000031003|ENST00000689681|FAM13B', 'nc|ENSG00000031003|Q9NYF5-3|FAM13B'] 17568 9292 EHKITQNWR True PC9_epitope_Rep2 1210.6207040095398 1210.6190549037901 41.082 3 -0.6420186249219452 0.18970650123914773 1.0 ['ENST00000600110.1_1_19:23779328-23779892:+|nuORF'] 60982 18276 LLAGVKAYI True PC9_epitope_Rep2 946.5851533646198 946.58404993586 75.619 2 -0.6420226429586872 0.1897191308956015 1.0 ['NCKAP1L|p.G924Dfs*20|1|0.23|ENSG00000123338|chr12:54531813-54531813|G/-|frameshift_variant', 'NCKAP1L|p.N982Ifs*2|1|0.16|ENSG00000123338|chr12:54535185-54535185|A/-|frameshift_variant', 'nc|ENSG00000123338|P55160-2|NCKAP1L', 'ENSG00000123338|ENST00000293373|NCKAP1L'] 130223 10332 VTSKFTGMHLY True H1975_Epitope_Rep1 1282.63799386646 1282.6363349037902 44.689 3 -0.6420751169458481 0.18973176015835658 1.0 ['nc|ENSG00000126970|Q9NQZ6-4|ZC4H2'] 12960 8337 DLPELSDSGD True NCI_RA007_Epitope_Rep5 1046.44039917538 1046.4393099358601 38.742 2 -0.6421472108829903 0.18975997506234413 1.0 ['ENSG00000185238|ENST00000331079|PRMT3'] 82018 7414 PSTHLIEVRP True NCI_RA007_Epitope_Rep2 1147.6349570913499 1147.63386993586 33.464 2 -0.6421607803620377 0.18977260329483642 1.0 ['POM121L12|p.W97Lfs*49|1|0.64|ENSG00000221900|chr7:53035959-53035960|-/T|frameshift_variant', 'ENSG00000221900|ENST00000408890|POM121L12'] 69027 14675 LVHRSQRDP True PC9_epitope_Rep1 1106.5944892617 1106.5933899358602 61.27 2 -0.642167082414546 0.18978602708557357 1.0 ['ENSG00000135521|ENST00000367576|LTV1', 'LTV1|p.H19Q|1|0.08|ENSG00000135521|chr6:143844539-143844539|C/G|missense_variant'] 11231 6778 DENRKVAL True PC9_epitope_Rep6 943.5086939490699 943.50758993586 34.891 2 -0.6422254989648101 0.18978602708557357 1.0 ['ENSG00000165943|ENST00000298894|MOAP1'] 123370 9105 VIAPAAIARAP True H1975_Epitope_Rep3 1048.6393141958 1048.63820993586 40.01 2 -0.6422359858118534 0.18978602708557357 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'ENST00000541750.1_12:122618368-122620257:+|nuORF', 'nc|ENSG00000175727|Q9HAP2-4|MLXIP', 'nc|ENSG00000175727|Q9HAP2-2|MLXIP'] 99348 20447 SLDRTLRLA True PC9_epitope_Rep5 1043.60874234351 1043.60764993586 83.685 2 -0.6422790073209739 0.18978602708557357 1.0 ['ENST00000568857.5_3_16:84164853-84177949:-|nuORF'] 16192 8007 EEFCCEDC True NCI_RA007_Epitope_Rep2 976.2612552385599 976.2607049679301 35.775 1 -0.642282556025888 0.18978602708557357 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-1|ZMYM6', 'ENST00000493328.5_1_1:35455862-35480681:-|nuORF'] 64688 21252 LRKYRCLLVTF True NCI_RA007_Epitope_Rep4 1410.8169612879399 1410.81586993586 92.132 2 -0.6422996425115336 0.18978602708557357 1.0 ['ENST00000336079.7_1_Y:15027660-15027840:+|nuORF'] 19477 13296 ELQELRRQMK True H1975_Epitope_Rep1 1329.7187037986498 1329.71760993586 56.247 2 -0.6423132628714783 0.189798653534472 1.0 ['ENSG00000058453|ENST00000375541|CROCC', 'nc|ENSG00000058453|Q5TZA2-2|CROCC'] 4985 7053 ALKKPTVNL True NCI_RA007_Epitope_Rep2 982.6175161220599 982.61640993586 32.059 2 -0.6423366919115877 0.18982390525167525 1.0 ['ENSG00000138722|ENST00000264790|MMRN1'] 16880 19216 EFWERNVLSL True PC9_epitope_Rep5 1291.6560864587498 1291.6549899358602 78.955 2 -0.6423566740870892 0.18982390525167525 1.0 ['ENSG00000131389|ENST00000622186|SLC6A6'] 9289 6882 AVRTLQRFQS True PC9_epitope_Rep5 1204.6676542019597 1204.66600490379 31.442 3 -0.6423669299029678 0.18982765606008664 1.0 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 54967 8200 LAIAIERYITM True NCI_RA007_Epitope_Rep1 1292.7162441871599 1292.7151499358602 35.894 2 -0.6423847489353076 0.18982765606008664 1.0 ['S1PR1|p.I164Gfs*81|1|0.13|ENSG00000170989|chr1:101239467-101239480|CCTGCTAATCAGCG/-|frameshift_variant', 'ENSG00000170989|ENST00000305352|S1PR1'] 46077 12711 ISYINESEL True PC9_epitope_Rep2 1066.51825557326 1066.51714993586 54.198 2 -0.6423864199612399 0.18982765606008664 1.0 ['ENSG00000186105|ENST00000334994|LRRC70'] 135359 7905 YDETYRRYRPV True H1975_Epitope_Rep1 1516.7422756941999 1516.7411699358602 35.358 2 -0.6423960160629298 0.18982765606008664 1.0 ['PPP1R12A|p.Q767R|1|0.08|ENSG00000058272|chr12:79796943-79796943|T/C|missense_variant'] 56776 16566 LEASDPNAYEL True H1975_Epitope_Rep2 1220.55609763396 1220.5550099358602 68.947 2 -0.6424564742848445 0.18990261005064277 1.0 ['ENSG00000120051|ENST00000369704|CFAP58'] 18889 9597 ELELEEELY True H1975_Epitope_Rep3 1165.53905058749 1165.53794993586 41.928 2 -0.6424659210711562 0.1899152331089504 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1', 'ENST00000521877.1_1_16:88782015-88782615:-|nuORF', 'ENST00000484567.5_1_16:88782015-88783673:-|nuORF'] 135338 6345 YDATYHKA True NCI_RA007_Epitope_Rep1 967.4399456829101 967.43884993586 28.706 2 -0.6425168171847611 0.1899434376801658 1.0 ['nc|ENSG00000091409|P23229-7|ITGA6', 'nc|ENSG00000091409|P23229-4|ITGA6', 'nc|ENSG00000091409|P23229-6|ITGA6', 'ENSG00000091409|ENST00000684293|ITGA6', 'nc|ENSG00000091409|P23229-9|ITGA6'] 10260 4553 CGDVNAKA True NCI_RA007_Epitope_Rep1 776.34868815036 776.34758993586 21.807 2 -0.642563634498895 0.18996868134436498 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'nc|ENSG00000107104|Q14678-2|KANK1'] 80863 14825 PLVNVAPE True PC9_epitope_Rep2 837.45961849833 837.45852993586 62.287 2 -0.6425821572952105 0.18996868134436498 1.0 ['ENSG00000206107|ENST00000382835|KRTAP27-1'] 108372 13574 TEDPTGHFL True PC9_epitope_Rep5 1015.4610750503099 1015.45996993586 57.236 2 -0.6426569139017233 0.18998130258647553 1.0 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1'] 93188 21591 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 89.327 2 -0.6426736896871832 0.1900065438908105 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 128925 18689 VSTRWEIIAE True PC9_epitope_Rep4 1202.6295373577398 1202.62844993586 79.967 2 -0.6426896079639681 0.1900065438908105 1.0 ['ENSG00000178913|ENST00000313368|TAF7'] 91969 14276 RPPWRRWRPWF True NCI_RA007_Epitope_Rep2 1638.8796530872198 1638.87854993586 60.192 2 -0.6427144876235857 0.19002882293370726 1.0 ['ENST00000532024.1_1_11:70118214-70118385:+|nuORF'] 27002 16436 FLLFQMYKLWD True PC9_epitope_Rep3 1502.76319437958 1502.76208993586 68.359 2 -0.6427237102767636 0.19002882293370726 1.0 ['ENST00000319725.9_1_9:133512585-133512708:+|nuORF'] 45649 22142 ISIFQTWYHLL True PC9_epitope_Rep5 1419.7550722240298 1419.7539699358601 90.206 2 -0.6427328118003893 0.19002882293370726 1.0 ['ENST00000578237.5_1_17:15555163-15586188:-|nuORF'] 18175 5607 EIQEAKAPSP True H1975_Epitope_Rep3 1068.54513902744 1068.5440499358601 26.608 2 -0.6427728924428232 0.190041442059016 1.0 ['ENSG00000154710|ENST00000284957|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-4|RABGEF1', 'nc|ENSG00000154710|Q9UJ41-3|RABGEF1'] 63020 15555 LNHEDLVL True PC9_epitope_Rep2 951.5025459394699 951.50144993586 65.105 2 -0.6428007441371278 0.1900422177563833 1.0 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES', 'ENST00000496379.5_1_15:91433070-91435551:+|nuORF', 'ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 68382 6519 LTSRDRKIMC True PC9_epitope_Rep2 1221.63219729337 1221.63055490379 30.491 3 -0.6428026591298871 0.1900422177563833 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 56868 20363 LEDLGWQKRRE True PC9_epitope_Rep4 1428.74736107464 1428.74626993586 86.471 2 -0.6428274358217378 0.1900422177563833 1.0 ['ENST00000562866.1_1_16:89782895-89783186:+|nuORF'] 3074 8533 AGAESLLHQA True PC9_epitope_Rep1 995.50360856863 995.50250993586 37.659 2 -0.6428357907423816 0.1900422177563833 1.0 ['ENSG00000242802|ENST00000649063|AP5Z1', 'nc|ENSG00000242802|O43299-2|AP5Z1', 'ENST00000496303.5_1_7:4815289-4829878:+|nuORF', 'AP5Z1|p.L137Yfs*82|1|0.3|ENSG00000242802|chr7:4783357-4783357|G/-|frameshift_variant'] 33524 13198 GLHSKVIL True PC9_epitope_Rep5 865.53853752537 865.53744993586 55.773 2 -0.6428700489767794 0.1900422177563833 1.0 ['ENST00000494820.5_1_22:20100432-20103278:-|nuORF', 'nc|ENSG00000099899|Q8IZ69-2|TRMT2A', 'ENSG00000099899|ENST00000252136|TRMT2A', 'ENST00000487668.5_1_22:20100432-20101310:-|nuORF', 'ENST00000487378.1_1_22:20100088-20100785:-|nuORF'] 110900 9511 TLALLTEKEL True PC9_epitope_Rep5 1129.6594405036901 1129.6577849037901 41.542 3 -0.6429368156825049 0.19005483549351945 1.0 ['ENSG00000101400|ENST00000217381|SNTA1'] 72645 18975 MWGWWRWWEHR True PC9_epitope_Rep3 1714.77280506018 1714.77115490379 78.21 3 -0.642939402597429 0.19006745283753682 1.0 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 4375 2710 AIQNHLQRQIR True PC9_epitope_Rep1 1375.77966426243 1375.77802490379 14.842 3 -0.6429668952982536 0.19008006978845374 1.0 ['ENSG00000185477|ENST00000609438|GPRIN3'] 62544 18754 LLTGLALPTL True PC9_epitope_Rep4 1010.6375828603 1010.63648993586 80.219 2 -0.6429826254487511 0.19009268634628865 1.0 ['ENSG00000179921|ENST00000519574|GPBAR1'] 14457 4849 DTQWTKVGRTP True H1975_Epitope_Rep3 1287.6571490879098 1287.6555149037902 23.777 3 -0.6430445278691213 0.19013426373010187 1.0 ['ENST00000537356.3_1_X:103357914-103358230:+|nuORF'] 93184 21109 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 87.373 2 -0.6430589193583085 0.19013426373010187 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 120695 15138 VGAQNGILI True PC9_epitope_Rep5 883.5127167003499 883.51160993586 63.233 2 -0.643069676378318 0.19013426373010187 1.0 ['nc|ENSG00000165240|Q04656-5|ATP7A', 'ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'ATP7A|p.G1028C|1|0.68|ENSG00000165240|chrX:78029415-78029415|G/T|missense_variant'] 60277 17385 LIEKVSLIIF True PC9_epitope_Rep2 1173.7372969015698 1173.73564490379 72.134 3 -0.6430828929289533 0.19013426373010187 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 85239 6579 QKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 34.011 3 -0.6431027406193297 0.19013426373010187 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 77923 14824 PAIHKSIAI True PC9_epitope_Rep5 948.5756513100799 948.57454993586 62.02 2 -0.6431112356022669 0.19013426373010187 1.0 ['ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-3|ERLEC1'] 112100 14556 TLTQNQAFSL True PC9_epitope_Rep2 1121.5716881284498 1121.5705899358602 61.261 2 -0.6431265648806197 0.19013426373010187 1.0 ['nc|ENSG00000150627|Q8IZU2|WDR17', 'ENSG00000150627|ENST00000508596|WDR17'] 103694 20532 SRDRRRNPRRF True NCI_RA007_Epitope_Rep5 1514.84030745638 1514.83920993586 85.917 2 -0.6431782133267652 0.19014391626689925 1.0 ['nc|ENSG00000059145|Q9H9P5|UNKL', 'nc|ENSG00000059145|Q9H9P5-5|UNKL', 'ENSG00000059145|ENST00000389221|UNKL', 'nc|ENSG00000059145|Q9H9P5-6|UNKL', 'ENST00000502438.6_1_16:1449373-1453182:-|nuORF', 'ENST00000509981.1_1_16:1447085-1449499:-|nuORF'] 135940 4708 YEWWFRWRLDR True NCI_RA007_Epitope_Rep2 1711.8371791385496 1711.83497987172 22.94 4 -0.6432054268214893 0.19014391626689925 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 57890 7891 LEQGSSRR True PC9_epitope_Rep1 931.48354183039 931.48244993586 35.179 2 -0.6432543610041999 0.19017210497624795 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.K736Rfs*16|1|0.7|ENSG00000176927|chr17:30055895-30055895|A/-|frameshift_variant'] 40771 5512 HVERYLPKR True NCI_RA007_Epitope_Rep2 1196.6778249628398 1196.67616490379 26.055 3 -0.6432856065401069 0.1901847179391334 1.0 ['ENST00000355112.7_1_15:91354554-91358468:+|nuORF'] 139040 10981 YSKDPFEF True NCI_RA007_Epitope_Rep3 1031.46001242115 1031.4589099358602 50.28 2 -0.6433777319446927 0.19019140618916353 1.0 ['nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1'] 45608 13310 ISGTSSPPHAL True PC9_epitope_Rep3 1065.54547338061 1065.54436993586 56.23 2 -0.6433802768977541 0.19019140618916353 1.0 ['ENST00000462410.5_1_1:211533005-211533107:+|nuORF'] 137952 7401 YPTRTKGVAY True H1975_Epitope_Rep3 1154.6084079903399 1154.60730993586 33.447 2 -0.6434145023622151 0.19019140618916353 1.0 ['ENSG00000184898|ENST00000331426|RBM43'] 92171 3681 RQEVAMMRNR True NCI_RA007_Epitope_Rep3 1289.6444933125697 1289.6428349037901 20.477 3 -0.6434371665442727 0.1902077428598125 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 73303 5231 NEKSEDIASQS True H1975_Epitope_Rep2 1206.53642481854 1206.53532993586 25.188 2 -0.6434561060078481 0.1902077428598125 1.0 ['ENSG00000122299|ENST00000355758|ZC3H7A', 'nc|ENSG00000122299|Q8IWR0-2|ZC3H7A'] 66390 13872 LSRDLTCLL True PC9_epitope_Rep1 1032.56376629704 1032.5626699358602 58.199 2 -0.6434881307028759 0.1902077428598125 1.0 ['ENST00000493339.1_1_6:43112822-43113530:+|nuORF'] 129561 14779 VTGFWLPTP True PC9_epitope_Rep2 1016.5331177917599 1016.53202993586 62.111 2 -0.643512762062904 0.1902077428598125 1.0 ['DCST1|p.M537Nfs*61|1|0.21|ENSG00000163357|chr1:155047308-155047309|-/A|frameshift_variant'] 81156 24858 PPLCFFLLLL True NCI_RA007_Epitope_Rep1 1174.68242487774 1174.68132993586 102.89 2 -0.6435423482738345 0.1902077428598125 1.0 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000600281.1_1_19:12776145-12777515:-|nuORF', 'ENST00000466794.5_1_19:12769146-12777470:-|nuORF'] 117382 7659 VACRWVTPV True PC9_epitope_Rep1 1029.5429712828097 1029.5418699358602 34.283 2 -0.643598475859996 0.19021146718988446 1.0 ['ENST00000558992.1_1_15:89179450-89180612:+|nuORF'] 114381 6673 TSDKKDSFYTD True H1975_Epitope_Rep2 1305.5724759740897 1305.57136993586 30.577 2 -0.6436041922391569 0.19021146718988446 1.0 ['ENSG00000111647|ENST00000279907|BLTP3B'] 43118 7192 IGNLHLAK True NCI_RA007_Epitope_Rep1 864.51813643396 864.51702993586 31.964 2 -0.6436274698736819 0.19021146718988446 1.0 ['ENSG00000198730|ENST00000361367|CTR9'] 119211 20304 VEKPLPEWP True PC9_epitope_Rep6 1093.58079626017 1093.5796899358602 90.807 2 -0.643630961006812 0.19021146718988446 1.0 ['nc|ENSG00000167524|Q96LW2|RSKR', 'ENSG00000167524|ENST00000301037|RSKR', 'nc|ENSG00000167524|Q96LW2-2|RSKR', 'nc|ENSG00000167524|Q96LW2-3|RSKR', 'ENSG00000258472|ENST00000531839|unknown'] 36996 22202 GVRRSFRK True PC9_epitope_Rep3 1004.5991807193199 1004.59808993586 90.687 2 -0.6436945674026358 0.1902396487020975 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 87154 15020 QSIVGAEGLSL True PC9_epitope_Rep1 1072.57643915572 1072.57534993586 62.595 2 -0.6438002662323924 0.19029600909359867 1.0 ['nc|ENSG00000140386|Q9BY12-3|SCAPER', 'ENSG00000140386|ENST00000563290|SCAPER'] 33675 5519 GLPRGAYR True NCI_RA007_Epitope_Rep4 888.49298431528 888.49188993586 27.823 2 -0.6438056558658722 0.19029600909359867 1.0 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 58453 10219 LEWQCWKLCTV True H1975_Epitope_Rep2 1407.66791409575 1407.66680993586 44.313 2 -0.6438381377686065 0.19032122448344052 1.0 ['ENST00000392869.6_1_2:144709568-144714810:-|nuORF'] 70240 13685 LYMGLYIVL True PC9_epitope_Rep6 1083.60384020387 1083.6027499358602 64.424 2 -0.6438565700598666 0.19032122448344052 1.0 ['ENST00000301067.11_1_12:49414036-49414432:-|nuORF'] 59588 8227 LGSALDPLADK True NCI_RA007_Epitope_Rep2 1098.5920892198599 1098.59098993586 36.638 2 -0.6439397169624883 0.19038054309915298 1.0 ['ENST00000489345.5_1_20:5990447-6004030:+|nuORF', 'ENST00000609154.1_1_20:5988006-5996237:+|nuORF', 'nc|ENSG00000088766|Q9UJA2-2|CRLS1', 'ENSG00000088766|ENST00000378863|CRLS1'] 115224 14439 TVCQFITATEM True PC9_epitope_Rep3 1242.5624459677 1242.56080490379 60.646 3 -0.6439956979105094 0.19042132469716314 1.0 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 20812 6027 EQNWRQHREAY True H1975_Epitope_Rep3 1515.69672248411 1515.69508490379 28.197 3 -0.6440102876160843 0.19042132469716314 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 5647 12250 APAGPALGL True PC9_epitope_Rep6 765.43848913093 765.43738993586 58.497 2 -0.6440745793209025 0.19044949943170317 1.0 ['ENSG00000074356|ENST00000389005|NCBP3'] 65128 18498 LSDPSITKL True PC9_epitope_Rep2 972.5491617787201 972.54806993586 76.488 2 -0.6441183139851093 0.19046210375537148 1.0 ['ENST00000478344.6_1_9:140240296-140248823:-|nuORF', 'nc|ENSG00000187609|Q8N9H8-2|EXD3', 'ENST00000487745.5_1_9:140201404-140247406:-|nuORF', 'ENSG00000187609|ENST00000340951|EXD3', 'nc|ENSG00000187609|Q8N9H8-3|EXD3', 'ENST00000491734.6_1_9:140201404-140249090:-|nuORF'] 69143 12761 LVLNTQSLV True PC9_epitope_Rep1 985.5807962601699 985.57968993586 53.959 2 -0.6442109956122507 0.19054958742020864 1.0 ['PZP|p.I1373Sfs*13|1|0.39|ENSG00000126838|chr12:9152829-9152829|G/-|frameshift_variant', 'ENSG00000126838|ENST00000261336|PZP', 'PZP|p.P260Qfs*6|1|0.3|ENSG00000126838|chr12:9197100-9197100|G/-|frameshift_variant', 'PZP|p.T1230Nfs*10|1|0.38|ENSG00000126838|chr12:9154701-9154702|-/T|frameshift_variant'] 93200 23938 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 98.595 2 -0.6442191240490814 0.19054958742020864 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 6955 17371 AQMAQSPILL True PC9_epitope_Rep4 1070.57941636118 1070.57830993586 74.82 2 -0.6442321973149703 0.19056218959692361 1.0 ['ENSG00000105135|ENST00000263383|ILVBL', 'ENST00000533086.5_1_19:15228578-15234387:-|nuORF'] 134210 22250 WRPYIQLRAPP True PC9_epitope_Rep2 1395.77753900411 1395.77644993586 91.061 2 -0.6442920477771925 0.19057182445160586 1.0 ['ENST00000515337.1_2_5:158758770-158758959:+|nuORF'] 93169 19582 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 81.254 2 -0.6442962374868468 0.19057182445160586 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 78512 8089 PDIPDSRVP True H1975_Epitope_Rep2 994.5083595959 994.50726993586 36.061 2 -0.6443826988400643 0.19059999377276832 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 45886 9387 ISQVWWCVP True NCI_RA007_Epitope_Rep1 1116.54263692964 1116.5415299358601 40.506 2 -0.6444325435446516 0.1906096270004359 1.0 ['chr14:103574170-103584864|155|13.79|0.0|20.39|+|1|TE_info:AluSg,AluSg_dup27341,Alu,SINE,acceptor,+,103584864,103585153|COA8,None|6'] 121950 13258 VGPRRKLNEI True NCI_RA007_Epitope_Rep3 1180.70403971068 1180.70294993586 59.424 2 -0.6445231400781433 0.1906096270004359 1.0 ['ENST00000586695.1_1_18:77287338-77287574:+|nuORF'] 116481 12723 TYDETYQRYRP True PC9_epitope_Rep6 1490.6790067313 1490.67790993586 60.424 2 -0.6445469042797725 0.19062222706539844 1.0 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 123449 6649 VIEQMKEQHHR True NCI_RA007_Epitope_Rep1 1433.71976642781 1433.7186699358601 29.875 2 -0.6445764289283549 0.1906288916562889 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 49313 4616 KHVHHHYIHHH True PC9_epitope_Rep5 1480.7337171295203 1480.73206490379 22.813 3 -0.6445870898287724 0.1906288916562889 1.0 ['AXIN2|p.N666Qfs*41|2|0.31|ENSG00000168646|chr17:65536466-65536467|-/C|frameshift_variant', 'AXIN2|p.E749Rfs*15|1|0.33|ENSG00000168646|chr17:65534072-65534073|-/T|frameshift_variant', 'ENSG00000168646|ENST00000307078|AXIN2'] 35214 7747 GSGQLHYSVP True H1975_Epitope_Rep2 1043.5036085686302 1043.5025099358602 34.752 2 -0.644590487011701 0.1906288916562889 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'PCDHA13|p.R619Hfs*37|1|0.2|ENSG00000239389|chr5:140884118-140884119|GC/-|frameshift_variant', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13', 'PCDHA9|p.Y421Tfs*28|1|0.23|ENSG00000204961|chr5:140849754-140849754|C/-|frameshift_variant', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000204961|Q9Y5H5-2|PCDHA9'] 60761 18797 LKELENLEI True PC9_epitope_Rep3 1099.61249031127 1099.6113899358602 77.526 2 -0.6445989762454469 0.19063258825726917 1.0 ['nc|nan|A6NFR6-3|C5orf60', 'nc|nan|A6NFR6-4|C5orf60', 'nc|nan|A6NFR6-2|C5orf60', 'nc|nan|A6NFR6|C5orf60'] 133843 16285 WLWWQPWWWWK True PC9_epitope_Rep6 1786.85612367798 1786.85502993586 75.0 2 -0.6446273282118139 0.19063258825726917 1.0 ['chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 125507 20843 VLVPWEDSFLS True PC9_epitope_Rep2 1290.6496040959798 1290.6479549037902 85.618 3 -0.644686554322516 0.19063258825726917 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 130214 13364 VTSEVQGLWRR True H1975_Epitope_Rep1 1329.71533267037 1329.7142299358602 56.514 2 -0.6447025608873358 0.19063258825726917 1.0 ['nc|ENSG00000164050|O43157-2|PLXNB1', 'ENSG00000164050|ENST00000296440|PLXNB1', 'ENST00000485535.5_1_3:48445895-48454598:-|nuORF'] 92344 9378 RQPDSGISSI True PC9_epitope_Rep3 1058.5356369729 1058.53452993586 41.012 2 -0.6447227307283872 0.1906577841422034 1.0 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 47125 14282 IVYYYRKHTKM True H1975_Epitope_Rep1 1500.7911404629197 1500.79004993586 60.121 2 -0.6447663776959147 0.1906577841422034 1.0 ['SPANXN2|p.I63M|1|0.66|ENSG00000268988|chrX:143712389-143712389|T/C|missense_variant'] 119861 18584 VEVSLGLPAL True PC9_epitope_Rep1 996.5855472874398 996.58444993586 76.272 2 -0.6448172310707919 0.19068594642551404 1.0 ['ENST00000441394.1_1_13:30881052-30881121:-|nuORF'] 11517 6576 DGHSPGEQQK True NCI_RA007_Epitope_Rep4 1081.4788503727702 1081.4777499358602 31.915 2 -0.6449022159397161 0.19069854314531193 1.0 ['CON__Q3KUS7'] 42341 8484 IELLHNIDP True H1975_Epitope_Rep2 1062.5709598524602 1062.5698699358602 37.586 2 -0.645022712557303 0.1907733972513191 1.0 ['nc|ENSG00000113273|P15848-2|ARSB', 'ENSG00000113273|ENST00000264914|ARSB'] 32556 12577 GGTWWRRWQPR True NCI_RA007_Epitope_Rep1 1484.75378386776 1484.7526899358602 52.902 2 -0.6450497263205484 0.19080155642023347 1.0 ['ENSG00000131398|ENST00000477616|KCNC3'] 93171 19829 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 82.258 2 -0.6450662404282363 0.19081415075251748 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 106304 21783 SVRKRRVRK True NCI_RA007_Epitope_Rep4 1183.7737910363496 1183.7726899358602 94.433 2 -0.6451101817036735 0.19082674469277222 1.0 ['nc|ENSG00000153132|O14967-2|CLGN', 'ENSG00000153132|ENST00000325617|CLGN'] 41407 9429 IARSIARAL True PC9_epitope_Rep6 969.6083484206898 969.60724993586 46.494 2 -0.645126114816485 0.19085193139726708 1.0 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'ENST00000590558.5_1_19:5692045-5712033:-|nuORF', 'nc|ENSG00000196365|P36776-3|LONP1', 'ENST00000587552.5_1_19:5696605-5708411:-|nuORF'] 101353 19028 SMDILMLLLL True PC9_epitope_Rep4 1160.65488980056 1160.65378993586 81.281 2 -0.6451274537016937 0.19085193139726708 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1'] 133621 368 WKERILKAK True PC9_epitope_Rep1 1170.7237125260997 1170.7220549037902 2.0476 3 -0.6452826725618653 0.1909579021087853 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 83216 9336 QAAELVTQNC True PC9_epitope_Rep5 1075.49680893603 1075.49570993586 40.864 2 -0.645304587198556 0.19097049302788843 1.0 ['ENST00000480357.5_1_2:239002459-239002759:+|nuORF'] 84881 6175 QHRQRWRL True PC9_epitope_Rep5 1178.6533415504998 1178.65168490379 28.736 3 -0.6453740037730203 0.19099567369043544 1.0 ['ENST00000473262.5_1_3:124837626-124909342:-|nuORF'] 82915 4203 PWDLWPPP True H1975_Epitope_Rep1 1006.4912529797799 1006.49014993586 21.124 2 -0.645379651885223 0.19099567369043544 1.0 ['ENST00000321751.9_1_1:1309740-1310526:-|nuORF', 'ENST00000338338.9_1_1:1309740-1310620:-|nuORF', 'ENST00000378853.3_1_1:1309740-1310526:-|nuORF'] 65679 4589 LSHDQVDMP True NCI_RA007_Epitope_Rep2 1040.45969515132 1040.4585899358601 22.477 2 -0.6454321353866229 0.1910238254563563 1.0 ['JAGN1|p.A69D|2|0.23|ENSG00000171135|chr3:9893031-9893031|C/A|missense_variant'] 17866 10733 EICEKEKKELK True NCI_RA007_Epitope_Rep2 1375.7381018305498 1375.7370099358602 46.35 2 -0.6455013949542345 0.191051976346094 1.0 ['nc|ENSG00000182621|Q9NQ66-2|PLCB1', 'ENSG00000182621|ENST00000338037|PLCB1'] 125854 11988 VNQLPADFRIL True NCI_RA007_Epitope_Rep2 1284.7190210684798 1284.7179299358602 51.222 2 -0.6455417692362664 0.19109568789779183 1.0 ['ENST00000342745.4_1_14:70078473-70125325:+|nuORF'] 62955 10135 LNEARREHAK True NCI_RA007_Epitope_Rep1 1222.6530667669801 1222.65196993586 43.433 2 -0.6455880140736568 0.1911082754971834 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'KIF13A-CCHCR1|1|fusion', 'ENST00000486060.1_1_6:31112443-31112875:-|nuORF'] 47168 23861 IWRKKYMRWMN True H1975_Epitope_Rep2 1610.8326284354198 1610.8309949037903 98.292 3 -0.6456133374529727 0.19111788870907506 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 139119 8208 YSPWQYFAHSK True H1975_Epitope_Rep3 1412.65133543148 1412.6502299358601 36.554 2 -0.645645512902298 0.19111788870907506 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 5370 3850 ALTQEQKKELS True NCI_RA007_Epitope_Rep2 1273.68778050985 1273.68613490379 19.609 3 -0.6456843782968332 0.19112521782424696 1.0 ['ENSG00000136872|ENST00000647789|ALDOB'] 36140 17953 GVEVAVLRV True PC9_epitope_Rep2 940.5705659296399 940.5700149679301 74.362 1 -0.6457067782645511 0.19112521782424696 1.0 ['nc|ENSG00000135503|P36896-3|ACVR1B'] 11299 6080 DETEHPVP True NCI_RA007_Epitope_Rep2 922.4032258210199 922.40212993586 28.257 2 -0.6457646725482846 0.19112521782424696 1.0 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 25049 4698 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 25.454 2 -0.6457783557525354 0.19112521782424696 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 134961 19712 YAFTGTILIV True PC9_epitope_Rep1 1096.6168474157198 1096.61574993586 80.648 2 -0.6457794413141945 0.19112521782424696 1.0 ['ENSG00000170683|ENST00000642047|OR10A3'] 108849 6534 TERDENTYY True H1975_Epitope_Rep3 1189.48874635013 1189.4876499358602 30.101 2 -0.6457874871647427 0.19112521782424696 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19'] 136302 16615 YGVLSLRSL True PC9_epitope_Rep1 1006.58113061334 1006.58002993586 68.736 2 -0.6457953872902316 0.19112521782424696 1.0 ['ABO|p.P39L|1|0.5|ENSG00000175164|chr9:133261357-133261357|G/A|missense_variant'] 63440 21830 LPGTLTLVT True PC9_epitope_Rep5 913.54843350273 913.54788496793 89.001 1 -0.6457968966256761 0.19112521782424696 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF', 'ENST00000561695.1_1_16:2128976-2129273:+|nuORF'] 60214 8328 LICSREVGLK True NCI_RA007_Epitope_Rep2 1116.6325145631997 1116.6314099358601 37.034 2 -0.645807333171452 0.19113780280988907 1.0 ['chrX:101098539-101101058|403|10.11|0.55|4.2|+|2|CENPI,CENPI|1'] 128814 21347 VSRSRSRSRSR True PC9_epitope_Rep5 1332.7446757360399 1332.74302490379 87.17 3 -0.6458558408836765 0.19115999751073495 1.0 ['SRSF2|p.S196*|1|0.29|ENSG00000161547|chr17:76736233-76736240|CCTCTTGG/-|frameshift_variant', 'nc|ENSG00000161547|Q01130-2|SRSF2', 'ENSG00000161547|ENST00000359995|SRSF2'] 75958 3119 NRGERDRERER True PC9_epitope_Rep5 1471.7352332511498 1471.7335949037902 16.991 3 -0.6458649829709422 0.19115999751073495 1.0 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5'] 64128 12044 LQEHQIVLVE True H1975_Epitope_Rep3 1206.66083748602 1206.6597499358602 51.488 2 -0.645865740506538 0.19115999751073495 1.0 ['ENSG00000128626|ENST00000308018|MRPS12'] 110534 5761 TIRDYGKEP True H1975_Epitope_Rep2 1077.5454733806098 1077.54436993586 27.155 2 -0.6459165962058273 0.19117258117211444 1.0 ['ENST00000498712.5_1_8:67383822-67386037:+|nuORF'] 3280 5440 AGGDLHFP True NCI_RA007_Epitope_Rep4 812.3817025308 812.38060993586 27.503 2 -0.6459515497929283 0.19119774732027567 1.0 ['nc|ENSG00000167889|Q3V5L5-5|MGAT5B', 'ENSG00000167889|ENST00000569840|MGAT5B', 'nc|ENSG00000167889|Q3V5L5-2|MGAT5B', 'ENST00000374998.3_1_17:74865111-74909907:+|nuORF'] 82165 9553 PTEDELSLP True H1975_Epitope_Rep2 999.4760564081099 999.47547496793 41.72 1 -0.6459572511834616 0.19119774732027567 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 135794 14306 YENLKWTLERK True NCI_RA007_Epitope_Rep2 1478.7881632574597 1478.78706993586 60.311 2 -0.6459750101883464 0.19121032980709396 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 116962 14938 TYPKIWVKV True PC9_epitope_Rep2 1132.66446631448 1132.66282490379 62.718 3 -0.6460275233184261 0.19123846859880836 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 73031 6357 NDEKERSM[Oxidation]S True H1975_Epitope_Rep3 1110.46115208374 1110.46004993586 29.445 2 -0.6461024618703792 0.19127026102106212 1.0 ['ENST00000522841.6_1_16:21481075-21531198:-|nuORF'] 6633 14715 APYFITKPV True H1975_Epitope_Rep2 1034.5800679841798 1034.5789699358602 61.762 2 -0.6461027476042047 0.19127026102106212 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'TTN|p.H3057Ifs*2|2|0.16|ENSG00000155657|chr2:178768151-178768151|A/-|frameshift_variant', 'TTN|p.P2078Qfs*61|1|0.14|ENSG00000155657|chr2:178775631-178775631|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 39208 11391 HLGVPISI True H1975_Epitope_Rep1 834.4963383602201 834.49524993586 48.794 2 -0.6461157334930008 0.19127026102106212 1.0 ['ENSG00000181004|ENST00000314218|BBS12'] 19313 10209 ELLWWVFP True PC9_epitope_Rep3 1088.56950330048 1088.56840993586 44.22 2 -0.6461551679474468 0.19127026102106212 1.0 ['ENST00000471957.1_1_9:140482023-140483371:-|nuORF'] 82850 13755 PVTLRRRPLP True NCI_RA007_Epitope_Rep2 1203.7564096367098 1203.75475490379 58.15 3 -0.6461557522748713 0.19127026102106212 1.0 ['chr11:119678765-119680483|191|11.76|0.29|5.36|-|1|NECTIN1,None|1'] 106756 17098 SYFAYDLHL True NCI_RA007_Epitope_Rep4 1127.5287606873098 1127.52766993586 74.079 2 -0.6461697136843383 0.1912798656047785 1.0 ['ENST00000544844.5_1_11:64085215-64085383:-|nuORF'] 85409 13473 QLELELKQEKE True H1975_Epitope_Rep1 1385.74021000553 1385.7391099358601 56.94 2 -0.6461836273393065 0.1912798656047785 1.0 ['nc|ENSG00000018189|Q7L099-4|RUFY3', 'ENSG00000018189|ENST00000381006|RUFY3'] 73443 9002 NETKSEDLP True PC9_epitope_Rep1 1031.4771190372699 1031.4760299358602 39.474 2 -0.6462141722393834 0.19130799981334287 1.0 ['ENSG00000168497|ENST00000304141|CAVIN2'] 12360 19583 DIYKKQLL True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 80.707 2 -0.6462783689192205 0.19131760277488297 1.0 ['ENSG00000174776|ENST00000682715|WDR49', 'nc|ENSG00000174776|Q8IV35-3|CFAP337', 'nc|ENSG00000174776|Q8IV35-2|CFAP337'] 63835 25178 LPTGSCFSPI True PC9_epitope_Rep1 1020.49501803088 1020.49392993586 101.73 2 -0.6462836846956433 0.19131760277488297 1.0 ['ENST00000472558.6_1_12:6657995-6658223:-|nuORF'] 80258 12686 PLDLIRKYY True H1975_Epitope_Rep1 1179.66519459047 1179.6640899358601 53.853 2 -0.6463017597050544 0.1913301810489641 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 69232 17088 LVNGERDLL True PC9_epitope_Rep6 1027.56620882519 1027.5651099358602 78.296 2 -0.6463085483750006 0.1913338310314794 1.0 ['ENST00000529460.1_1_11:118272380-118277657:+|nuORF'] 85690 12315 QLRKDPAL True PC9_epitope_Rep1 939.5501648382298 939.54906993586 52.225 2 -0.6463525155982146 0.1913338310314794 1.0 ['nc|ENSG00000116138|Q9Y2G8-2|DNAJC16', 'ENSG00000116138|ENST00000375847|DNAJC16', 'ENST00000483270.1_1_1:15886792-15891842:+|nuORF'] 33450 14953 GLGLEDELR True PC9_epitope_Rep1 1000.5189242795999 1000.51782993586 62.339 2 -0.6463656111135104 0.1913338310314794 1.0 ['ENSG00000160741|ENST00000368633|CRTC2', 'ENST00000461638.6_1_1:153920587-153921610:-|nuORF'] 93186 21341 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 88.307 2 -0.6463904721042919 0.1913338310314794 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 38938 7316 HIPVLPGK True PC9_epitope_Rep2 859.5279728416699 859.52686993586 33.525 2 -0.6464216828281022 0.19134640807502684 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 57121 6716 LEEPKNIP True NCI_RA007_Epitope_Rep1 938.50729696674 938.50618993586 30.133 2 -0.6464576090397046 0.1913589847273632 1.0 ['ENST00000366987.6_2_1:212793496-212793775:+|nuORF'] 31274 5642 GDSSQSLFVDR True NCI_RA007_Epitope_Rep1 1209.56257999673 1209.5614899358602 26.006 2 -0.6464624483427198 0.19137156098850683 1.0 ['ENST00000472792.1_1_6:43027707-43029170:+|nuORF'] 93168 19418 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 80.595 2 -0.6465611853048786 0.19141524105754276 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 125409 15094 VLTHERRPTNK True PC9_epitope_Rep1 1349.7527808082498 1349.75113490379 62.878 3 -0.6465825286275887 0.1914159085607651 1.0 ['DPPA3|p.R108L|1|0.12|ENSG00000187569|chr12:7715423-7715423|G/T|missense_variant'] 68538 21293 LTVYIKNIF True PC9_epitope_Rep1 1109.64848189717 1109.64738993586 86.731 2 -0.6465853126828 0.1914159085607651 1.0 ['ENSG00000131558|ENST00000253861|EXOC4'] 93174 20143 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 83.471 2 -0.6466379443493547 0.1914159085607651 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 48632 4986 KEIQHPNVI True H1975_Epitope_Rep2 1076.59784330664 1076.59674993586 24.263 2 -0.6466474781378397 0.1914159085607651 1.0 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1', 'ENST00000469067.5_1_9:90113992-90265069:+|nuORF', 'ENST00000472344.1_1_9:90113992-90254278:+|nuORF'] 127110 13383 VQAVVPRGL True PC9_epitope_Rep4 937.5709002828098 937.56980993586 59.381 2 -0.6466791163620768 0.1914159085607651 1.0 ['ENST00000478371.1_1_9:123629171-123630543:-|nuORF', 'ENST00000419155.5_1_9:123629171-123631115:-|nuORF'] 91231 24464 RLRRLERRRRK True NCI_RA007_Epitope_Rep1 1594.0240259051295 1594.02238490379 101.36 3 -0.6466969158787945 0.19142848256772307 1.0 ['nc|ENSG00000196557|O95180-2|CACNA1H'] 42291 9141 IEISKLTDKVQ True NCI_RA007_Epitope_Rep2 1272.72891704584 1272.7278299358602 40.163 2 -0.6467377902540575 0.19145362940847174 1.0 ['nc|ENSG00000134313|Q9ULH0-4|KIDINS220', 'KIDINS220|p.Q48Hfs*6|1|0.26|ENSG00000134313|chr2:8818756-8818758|CCT/AA|frameshift_variant', 'ENSG00000134313|ENST00000256707|KIDINS220', 'nc|ENSG00000134313|Q9ULH0-2|KIDINS220', 'ENST00000488729.5_1_2:8870852-8965899:-|nuORF', 'nc|ENSG00000134313|Q9ULH0-5|KIDINS220'] 12698 13259 DLFHEELEDFY True H1975_Epitope_Rep2 1455.61942616651 1455.6183299358602 56.13 2 -0.6467502064208719 0.19145362940847174 1.0 ['nc|ENSG00000258128|Q6NVV0|MKRN9P'] 95721 4176 SCCCCCCC True PC9_epitope_Rep1 826.10688658094 826.10578993586 20.959 2 -0.6468346707393489 0.19146322500388743 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 139044 5587 YSKELKKWDEF True NCI_RA007_Epitope_Rep1 1471.7347307022699 1471.7330849037899 25.797 3 -0.646880085423169 0.19146322500388743 1.0 ['ENSG00000116906|ENST00000366647|GNPAT'] 114777 8886 TTAATEII True PC9_epitope_Rep3 818.43854870058 818.43744993586 39.131 2 -0.6469345687527948 0.19148836920014928 1.0 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 79529 16578 PGRRPRPGL True PC9_epitope_Rep6 1004.5991807193197 1004.59808993586 76.213 2 -0.64693980374472 0.19148836920014928 1.0 ['nc|ENSG00000099622|Q14011-2|CIRBP', 'ENSG00000099622|ENST00000587896|CIRBP', 'ENST00000590347.5_1_19:1271297-1272439:+|nuORF', 'ENST00000590704.5_1_19:1271297-1272439:+|nuORF', 'nc|ENSG00000099622|Q14011-3|CIRBP', 'ENST00000591097.5_1_19:1271671-1272439:+|nuORF'] 41160 19266 HYSLDDWKLF True NCI_RA007_Epitope_Rep3 1322.6295373577398 1322.62844993586 84.126 2 -0.6469833245104153 0.1915009407118312 1.0 ['ENSG00000137198|ENST00000259727|GMPR'] 58155 5865 LESFYEKPPP True H1975_Epitope_Rep2 1205.5968402471299 1205.59519490379 27.545 3 -0.6470157487448839 0.19151053409002566 1.0 ['ENSG00000164610|ENST00000297157|RP9', 'ENST00000474370.1_1_7:33138787-33148984:-|nuORF', 'ENST00000450133.5_1_7:32956958-32982633:-|nuORF'] 77954 6017 PALAGPPAH True PC9_epitope_Rep3 829.44463714053 829.44354993586 28.198 2 -0.6470569263701899 0.19151053409002566 1.0 ['ENSG00000139800|ENST00000267294|ZIC5'] 136052 9773 YFTIFLLYLTI True NCI_RA007_Epitope_Rep5 1405.7897263972498 1405.7886299358602 44.238 2 -0.6471014778237788 0.19152012687158915 1.0 ['ENSG00000167904|ENST00000434581|TMEM68', 'nc|ENSG00000167904|Q96MH6-3|TMEM68', 'nc|ENSG00000167904|Q96MH6-2|TMEM68'] 22053 6950 ESRQRQSRMEK True H1975_Epitope_Rep3 1433.7157436765299 1433.71464993586 31.695 2 -0.6471056191871576 0.19152012687158915 1.0 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1', 'ENST00000493660.5_1_17:38792069-38802054:-|nuORF'] 98678 22103 SIQLFYKFV True PC9_epitope_Rep5 1143.63283183303 1143.6317299358602 90.051 2 -0.6471872918245818 0.19154824465934886 1.0 ['PRKDC|p.E1189Q|1|0.27|ENSG00000253729|chr8:47897194-47897194|C/G|missense_variant'] 93183 21025 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 87.026 2 -0.6473069121040838 0.1915608140673829 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 96528 11743 SELLPSGLWPQ True H1975_Epitope_Rep2 1225.63428838501 1225.6331899358602 50.244 2 -0.6473503893118939 0.1915733830845771 1.0 ['ENST00000320892.10_1_2:7180578-7180827:+|nuORF'] 128043 24356 VRRKGLGK True NCI_RA007_Epitope_Rep4 912.5981180901598 912.5975649679301 105.68 1 -0.6474014656795021 0.19158595171094978 1.0 ['ENST00000544194.5_1_11:63720210-63721948:+|nuORF', 'nc|ENSG00000110583|Q86UY6-4|NAA40', 'nc|ENSG00000110583|Q86UY6-3|NAA40', 'ENST00000534965.5_1_11:63706554-63721948:+|nuORF', 'ENSG00000110583|ENST00000377793|NAA40', 'ENST00000338447.10_1_11:63714317-63721948:+|nuORF'] 32861 16338 GIKKAAENI True PC9_epitope_Rep1 942.5498304850599 942.54872993586 67.663 2 -0.647424143554759 0.19159851994651908 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 77925 7698 PAIISQLDP True H1975_Epitope_Rep2 952.52294703088 952.52184993586 34.565 2 -0.6475332557418475 0.1916888204841192 1.0 ['ENSG00000135829|ENST00000367549|DHX9', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF', 'nc|ENSG00000135829|Q08211-2|DHX9'] 4237 20085 AIGESPVLVA True PC9_epitope_Rep5 954.5385970950199 954.5380449679301 82.306 1 -0.647590106015508 0.19171097223517708 1.0 ['ENST00000512916.2_1_12:54330967-54333404:-|nuORF'] 39620 15334 HPLRRWRWHRF True PC9_epitope_Rep3 1645.8967001336898 1645.89505490379 64.14 3 -0.6475987946227568 0.19171097223517708 1.0 ['CDH12|p.V63Cfs*43|1|0.46|ENSG00000154162|chr5:22078490-22078491|-/A|frameshift_variant'] 42165 20023 IEFGYWRRFQK True PC9_epitope_Rep2 1528.7939173442398 1528.79227490379 82.423 3 -0.6476110091979723 0.19171097223517708 1.0 ['ENST00000450453.6_2_1:163292714-163292795:+|nuORF'] 136778 9406 YIRKLLLQLL True NCI_RA007_Epitope_Rep3 1271.8329286219098 1271.83237496793 44.086 1 -0.6476409939963063 0.19172353755032878 1.0 ['ENST00000475034.1_1_3:76360291-76360369:+|nuORF'] 117299 16942 VAAEHNLQL True PC9_epitope_Rep5 993.5243440132099 993.52324993586 70.184 2 -0.6477496486491018 0.1917486670086586 1.0 ['nc|ENSG00000293451|Q8IZJ6-3|TDH', 'nc|ENSG00000293451|Q8IZJ6-2|TDH', 'nc|ENSG00000293451|Q8IZJ6|TDH'] 46562 6153 ITREASKEIP True H1975_Epitope_Rep3 1142.62953735774 1142.62844993586 28.68 2 -0.647782154795579 0.1917486670086586 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 4829 9028 ALERVSSASVP True PC9_epitope_Rep2 1114.59823722946 1114.5971499358602 40.075 2 -0.6478650563041379 0.19183895538628945 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1'] 24797 5822 FCGLDNKQ True NCI_RA007_Epitope_Rep5 923.4171020633501 923.41600993586 29.08 2 -0.6479199780023963 0.19185513328670242 1.0 ['ENST00000591073.1_1_19:37935822-37959899:-|nuORF', 'ENST00000591710.5_1_19:37945970-37958237:-|nuORF'] 35393 8724 GTDDPQIKQD True H1975_Epitope_Rep1 1115.50948179471 1115.5083899358601 38.485 2 -0.6479953301203043 0.19185513328670242 1.0 ['nc|ENSG00000144455|Q8NBK3-2|SUMF1', 'nc|ENSG00000144455|Q8NBK3-4|SUMF1', 'nc|ENSG00000144455|Q8NBK3-5|SUMF1', 'ENSG00000144455|ENST00000272902|SUMF1', 'nc|ENSG00000144455|Q8NBK3-3|SUMF1'] 28294 16459 FRWWRRRWNPR True H1975_Epitope_Rep3 1714.9181638542595 1714.9170699358601 68.797 2 -0.6479997787135804 0.19185513328670242 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 72644 18891 MWGWWRWWEHR True PC9_epitope_Rep1 1714.77280506018 1714.77115490379 77.449 3 -0.6480238199910611 0.19185513328670242 1.0 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 93193 22209 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 91.782 2 -0.6480309279184439 0.19185513328670242 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 60547 7028 LIPRVEQQNTK True NCI_RA007_Epitope_Rep5 1324.7462984454799 1324.7452099358602 33.712 2 -0.6480762448315205 0.1918832380004974 1.0 ['nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4'] 29944 6347 FWWDRWLCKNR True NCI_RA007_Epitope_Rep2 1608.7772217342797 1608.7755749037901 29.295 3 -0.6481354394173225 0.1918928160651559 1.0 ['ENST00000491103.5_1_6:10748006-10756744:+|nuORF'] 23378 20124 EVTWTKDNINL True H1975_Epitope_Rep3 1331.6721304457099 1331.6710299358601 84.198 2 -0.6481500528327945 0.1918928160651559 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 11194 20413 DEKLRHYFRYL True NCI_RA007_Epitope_Rep2 1538.7993966475 1538.79828993586 84.471 2 -0.6482740444110462 0.19191495314029935 1.0 ['CA4|p.E211D|2|0.32|ENSG00000167434|chr17:60158335-60158335|G/C|missense_variant'] 40243 11449 HRIPEPEAAVL True PC9_epitope_Rep4 1230.67207087606 1230.67096993586 51.807 2 -0.6482810062212379 0.19191495314029935 1.0 ['ENSG00000101255|ENST00000217233|TRIB3'] 105497 14591 SVDDTIVAL True NCI_RA007_Epitope_Rep2 931.4862271689899 931.4856749679301 61.42 1 -0.6483236661207539 0.19191495314029935 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 26290 12604 FIDGHFVEM True NCI_RA007_Epitope_Rep5 1093.4902670036101 1093.4891699358602 55.134 2 -0.6483445386129344 0.19192154668655975 1.0 ['ENSG00000170871|ENST00000307659|KIAA0232'] 57014 13358 LEEELDLLL True PC9_epitope_Rep3 1085.58560685709 1085.58450993586 56.415 2 -0.6483706805953657 0.19192154668655975 1.0 ['ENSG00000169857|ENST00000306730|AVEN'] 77690 6230 PAAARPLPAA True PC9_epitope_Rep4 933.5396001545298 933.53850993586 31.01 2 -0.6483829929349759 0.19192154668655975 1.0 ['ENST00000555638.5_1_14:67940311-67953837:-|nuORF'] 58188 20889 LESLTLNLA True PC9_epitope_Rep4 972.54916177872 972.54806993586 88.507 2 -0.6484166112037332 0.19194368035805864 1.0 ['nc|ENSG00000124159|O95460-3|MATN4', 'nc|ENSG00000124159|O95460-4|MATN4', 'ENSG00000124159|ENST00000372756|MATN4', 'nc|ENSG00000124159|O95460|MATN4'] 57764 5904 LENVEGLPSP True NCI_RA007_Epitope_Rep2 1053.5342399905699 1053.5331499358601 27.582 2 -0.6484238088513753 0.19194368035805864 1.0 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'ENST00000482556.5_1_20:47242425-47249020:-|nuORF'] 23186 20714 EVPRRKLRP True H1975_Epitope_Rep2 1149.7094594442897 1149.7083699358602 85.782 2 -0.6484304042897566 0.19194368035805864 1.0 ['ENST00000498040.5_1_21:45148712-45148838:+|nuORF'] 46661 16480 ITVHHTEVL True PC9_epitope_Rep2 1047.57129420563 1047.57018993586 68.632 2 -0.6484538224359633 0.19195686292791322 1.0 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 19312 19511 ELLWPLFLFFI True PC9_epitope_Rep4 1436.8107961949997 1436.8096899358602 83.169 2 -0.6484661842531064 0.19195686292791322 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF', 'ENST00000525238.2_1_19:1041360-1041637:+|nuORF', 'ENST00000527496.1_1_19:1041282-1041972:+|nuORF'] 68033 16466 LTNEGAKAL True PC9_epitope_Rep5 915.5025459394699 915.50144993586 68.335 2 -0.6484990500098549 0.19195686292791322 1.0 ['ENST00000536374.1_1_9:80851502-80863830:+|nuORF', 'nc|ENSG00000148019|Q5JTW2|CEP78', 'ENSG00000148019|ENST00000643273|CEP78', 'nc|ENSG00000148019|Q5JTW2-5|CEP78', 'nc|ENSG00000148019|Q5JTW2-2|CEP78'] 85151 10386 QIVSFYFKLFK True H1975_Epitope_Rep3 1418.7962087600197 1418.7951099358602 45.006 2 -0.648517803334352 0.19195686292791322 1.0 ['ENSG00000111537|ENST00000229135|IFNG'] 65983 10671 LSLSRMIP True PC9_epitope_Rep3 915.52117320907 915.52006993586 45.992 2 -0.6485220864642539 0.19195686292791322 1.0 ['ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 59860 6743 LHGFTAWFSVH True H1975_Epitope_Rep1 1300.6352914445201 1300.6336349037902 30.979 3 -0.6485571258613163 0.19195686292791322 1.0 ['ENST00000486520.1_1_21:48081621-48084236:+|nuORF', 'nc|ENSG00000160310|P55345-3|PRMT2', 'ENSG00000160310|ENST00000355680|PRMT2'] 134970 12594 YAFWGAASF True PC9_epitope_Rep3 1018.4548674710599 1018.45376993586 53.466 2 -0.6486039533646409 0.19198495819995648 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 66724 10205 LSTPPPKQAP True PC9_epitope_Rep1 1034.5760452328998 1034.57494993586 44.132 2 -0.6486529609181282 0.19199751379069224 1.0 ['ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 36491 16332 GVKFLRRFKQL True NCI_RA007_Epitope_Rep4 1390.85612367798 1390.85502993586 70.818 2 -0.648718760231318 0.19200410205413468 1.0 ['ENSG00000077044|ENST00000264057|DGKD', 'ENST00000490764.5_1_2:234327938-234366271:+|nuORF', 'ENST00000474488.1_1_2:234343429-234350860:+|nuORF', 'nc|ENSG00000077044|Q16760-2|DGKD', 'ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 139079 6889 YSLSEPPR True NCI_RA007_Epitope_Rep3 947.4712458111899 947.47014993586 34.205 2 -0.6487457904595406 0.19200410205413468 1.0 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-5|ARHGEF28'] 77953 5431 PALAGPPAH True PC9_epitope_Rep2 829.44463714053 829.44354993586 26.283 2 -0.6487630240879106 0.19200410205413468 1.0 ['ENSG00000139800|ENST00000267294|ZIC5'] 130022 18781 VTPPGWYL True PC9_epitope_Rep5 931.4803539429099 931.47924993586 77.254 2 -0.6487960627623327 0.1920321944094843 1.0 ['ENST00000593077.1_2_19:11666299-11666497:-|nuORF'] 47752 14830 IYQRCWLVF True PC9_epitope_Rep5 1226.6270352599397 1226.62537490379 62.044 3 -0.6488612712137088 0.1920758234928527 1.0 ['ENSG00000101134|ENST00000262593|DOK5'] 117278 7362 VAAALFLHP True PC9_epitope_Rep2 937.53853752537 937.53744993586 33.699 2 -0.6488847144713291 0.19208539200149155 1.0 ['nc|ENSG00000165271|Q9H6R4-2|NOL6', 'nc|ENSG00000165271|Q9H6R4-4|NOL6', 'ENSG00000165271|ENST00000297990|NOL6'] 83642 5692 QEAEKNVQQNV True H1975_Epitope_Rep2 1285.62624288245 1285.62514993586 26.893 2 -0.6488970480933842 0.19208539200149155 1.0 ['ENST00000359481.8_1_2:88051819-88053081:+|nuORF'] 72866 11054 NAQFKSLV True PC9_epitope_Rep4 905.4970666362099 905.49596993586 50.294 2 -0.6489621858733636 0.19209197545249748 1.0 ['ENST00000533507.5_1_11:47602194-47606030:+|nuORF', 'nc|ENSG00000213619|O75489-2|NDUFS3', 'ENSG00000213619|ENST00000263774|NDUFS3'] 23381 7783 EVVDDEEFDWE True H1975_Epitope_Rep2 1410.5463207958999 1410.5446649037901 34.884 3 -0.6489662292283978 0.19209197545249748 1.0 ['ENSG00000144736|ENST00000325599|SHQ1', 'nc|ENSG00000144736|Q6PI26-2|SHQ1'] 20859 7221 EQQVKELEK True NCI_RA007_Epitope_Rep1 1129.5979028762897 1129.5968099358602 32.077 2 -0.6489685101231839 0.19209197545249748 1.0 ['ENSG00000197978|ENST00000618348|GOLGA6L9', 'nc|ENSG00000197978|A6NEM1-2|GOLGA6L9', 'ENSG00000278662|ENST00000610657|GOLGA6L10'] 15076 16906 EAAVQRKHNLY True NCI_RA007_Epitope_Rep1 1327.6996826062298 1327.6985899358601 69.888 2 -0.6490344321725273 0.19210452723487556 1.0 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 114658 7612 TSQPSTSVP True H1975_Epitope_Rep3 902.4345259493 902.43342993586 34.26 2 -0.6491304393176073 0.19217922227228237 1.0 ['nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2', 'nc|ENSG00000053524|Q86YR7-2|MCF2L2', 'ENST00000488149.5_1_3:182948954-183027611:-|nuORF', 'nc|ENSG00000053524|Q86YR7-3|MCF2L2'] 108840 4678 TEQYIQTMTWL True H1975_Epitope_Rep3 1412.66460253712 1412.66296490379 23.118 3 -0.6492053545103218 0.19223240640049713 1.0 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 107678 9331 TAKPGSKTL True PC9_epitope_Rep3 901.5232813840499 901.52218993586 40.831 2 -0.6492072027640506 0.19223240640049713 1.0 ['ENSG00000101098|ENST00000372851|RIMS4', 'nc|ENSG00000101098|Q9H426-2|RIMS4'] 32197 20045 GFESLSQYG True PC9_epitope_Rep3 986.4345259493 986.43342993586 82.352 2 -0.649216820813572 0.19223240640049713 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant'] 34758 22494 GQRLPVEDFSL True PC9_epitope_Rep5 1259.6510010783097 1259.64990993586 91.526 2 -0.6492640586027666 0.19224196855775802 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 26872 320 FLFCLFKHLCL True NCI_RA007_Epitope_Rep2 1382.7243067730599 1382.7226649037902 1.7543 3 -0.6492677950204018 0.19224196855775802 1.0 ['nc|ENSG00000137691|Q9BRQ4-2|CFAP300', 'ENST00000530659.1_1_11:101918495-101953927:+|nuORF', 'ENSG00000137691|ENST00000434758|CFAP300'] 136796 23666 YISRLRRTV True PC9_epitope_Rep5 1162.69347502698 1162.6923699358601 96.012 2 -0.6493475310193481 0.19224555735056542 1.0 ['CON__ENSEMBL:ENSBTAP00000038253'] 49096 17339 KGAAGFSI True PC9_epitope_Rep2 749.4071890026501 749.40608993586 71.949 2 -0.6493481191230362 0.19224555735056542 1.0 ['ENSG00000144029|ENST00000272418|MRPS5'] 74693 13626 NLIPNGSSI True NCI_RA007_Epitope_Rep4 913.48689587533 913.48578993586 59.633 2 -0.6493739065229841 0.19224555735056542 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'ENST00000510223.5_1_4:89394995-89425581:+|nuORF', 'ENST00000502913.1_1_4:89394186-89425581:+|nuORF'] 11435 10505 DFRCNCVPIP True H1975_Epitope_Rep3 1162.5263352425 1162.5252299358601 45.471 2 -0.6493821379886668 0.19224555735056542 1.0 ['ENSG00000196664|ENST00000380659|TLR7'] 121202 17820 VGGNFEIL True PC9_epitope_Rep5 847.4439684341899 847.44286993586 73.563 2 -0.6494097968505533 0.19225810460257545 1.0 ['ENSG00000179941|ENST00000650064|BBS10'] 45621 9460 ISHFFAESP True H1975_Epitope_Rep2 1033.4868958753298 1033.48578993586 41.355 2 -0.6494176552757116 0.1922706514647861 1.0 ['CON__ENSEMBL:ENSBTAP00000031360'] 79176 13721 PGEDPPVS True PC9_epitope_Rep6 796.36029837988 796.35920993586 64.566 2 -0.6494700160753314 0.1922802112457285 1.0 ['ENST00000392914.3_1_12:102517666-102545686:+|nuORF'] 84365 14353 QGAGSVLF True PC9_epitope_Rep6 777.40210362221 777.40100993586 67.106 2 -0.649489820489421 0.1922802112457285 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 38832 24327 HIFLWLRWRI True PC9_epitope_Rep4 1438.8349943105798 1438.83388993586 102.06 2 -0.6495547245529258 0.1923238222456936 1.0 ['ENSG00000128519|ENST00000249284|TAS2R16'] 86402 6730 QQMQEAEL True PC9_epitope_Rep5 975.4331460503098 975.43204993586 30.859 2 -0.6496284738597944 0.19236204941837892 1.0 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES'] 42338 11347 IELIKSGG True PC9_epitope_Rep1 815.47526856247 815.47416993586 48.524 2 -0.6496371540749505 0.19236204941837892 1.0 ['SLC25A13-MAGI2|2|fusion', 'SLC25A13-MAGI2|1|fusion', 'nc|ENSG00000187391|Q86UL8-2|MAGI2', 'ENSG00000187391|ENST00000354212|MAGI2'] 84159 11094 QERHRRPPP True H1975_Epitope_Rep2 1171.6322717527498 1171.63116993586 47.707 2 -0.6496497838891314 0.19236204941837892 1.0 ['ENST00000367033.3_1_1:208417261-208417633:-|nuORF'] 96485 26121 SEKPEMKQKW True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 113.35 3 -0.6496528558977266 0.19236204941837892 1.0 ['NFIB|p.I68M|1|0.53|ENSG00000147862|chr9:14307347-14307347|G/C|missense_variant'] 108098 8790 TDLNRDVTL True PC9_epitope_Rep4 1045.54038800017 1045.53928993586 41.325 2 -0.6496660963893165 0.19236204941837892 1.0 ['nc|ENSG00000073712|Q96AC1-2|FERMT2', 'ENSG00000073712|ENST00000341590|FERMT2', 'nc|ENSG00000073712|Q96AC1-3|FERMT2'] 69397 19814 LVQNHQDP True PC9_epitope_Rep1 949.4617437566499 949.46064993586 81.03 2 -0.6497084357053874 0.19236204941837892 1.0 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4'] 12766 6579 DLHKNEWNAYY True H1975_Epitope_Rep1 1451.6469783270302 1451.6458899358602 30.365 2 -0.649729225758573 0.19236204941837892 1.0 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ALDH3A1|p.V67Efs*7|1|0.14|ENSG00000108602|chr17:19743423-19743426|AGGA/-|frameshift_variant'] 99852 10124 SLHDPPDGAL True NCI_RA007_Epitope_Rep4 1020.4876241513199 1020.48652993586 45.797 2 -0.6498061037325685 0.19236204941837892 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.R1248Pfs*56|1|0.39|ENSG00000205978|chr14:24415486-24415487|-/G|frameshift_variant'] 66745 9269 LSTSLKLGP True NCI_RA007_Epitope_Rep3 914.54368247546 914.54258993586 43.567 2 -0.649872991653962 0.19237160472736872 1.0 ['ENSG00000151577|ENST00000383673|DRD3'] 59402 8271 LGLRANKTSP True H1975_Epitope_Rep3 1055.6087423435101 1055.60764993586 36.796 2 -0.6498744517055945 0.19237160472736872 1.0 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3'] 127385 9128 VQQHRKYYQDK True NCI_RA007_Epitope_Rep2 1491.7582601115098 1491.75716993586 40.111 2 -0.6499839354828291 0.19239370127651645 1.0 ['ENST00000453368.1_1_2:26799001-26801669:+|nuORF', 'ENST00000479453.1_1_2:26798863-26800497:+|nuORF', 'ENSG00000173557|ENST00000329615|FAM166C'] 58454 7479 LEWRCCPGFR True NCI_RA007_Epitope_Rep3 1265.5797677976898 1265.57866993586 36.539 2 -0.6500012064229042 0.19239370127651645 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2'] 10138 17060 CAWSWCLRTPP True PC9_epitope_Rep1 1318.5950835086599 1318.59343490379 70.447 3 -0.6500119889786693 0.19239370127651645 1.0 ['ENST00000473989.7_2_7:138916399-138921835:+|nuORF'] 96399 10357 SEIDLLDIRTE True H1975_Epitope_Rep3 1302.6667107121 1302.6656099358602 44.893 2 -0.6500548667415336 0.19244984160506864 1.0 ['ENST00000505805.1_1_4:79518453-79531266:+|nuORF', 'ENSG00000138772|ENST00000264908|ANXA3'] 84362 15987 QGAGSVLF True PC9_epitope_Rep2 777.40210362221 777.40100993586 66.748 2 -0.6501172163116633 0.19244984160506864 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 46005 5749 ISTVELQK True NCI_RA007_Epitope_Rep5 916.5229470308799 916.52184993586 28.801 2 -0.65014990328925 0.19247193279398747 1.0 ['ENSG00000164180|ENST00000296595|TMEM161B', 'ENST00000510089.5_1_5:87494777-87494978:-|nuORF'] 93172 19934 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 82.659 2 -0.6501528791924677 0.19247193279398747 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 134125 15469 WRDKGCVTEVK True H1975_Epitope_Rep3 1319.6656055966298 1319.66450993586 64.918 2 -0.650178685125368 0.19247193279398747 1.0 ['CTSS|p.E123D|1|0.13|ENSG00000163131|chr1:150755031-150755031|C/G|missense_variant'] 100898 7148 SLSKLTAP True PC9_epitope_Rep3 815.47526856247 815.47416993586 32.508 2 -0.6502433058386139 0.1925 1.0 ['ENSG00000111860|ENST00000368491|CEP85L', 'nc|ENSG00000111860|Q5SZL2-4|CEP85L', 'ENST00000483035.5_1_6:118886676-118973579:-|nuORF', 'nc|ENSG00000111860|Q5SZL2-3|CEP85L', 'nc|ENSG00000111860|Q5SZL2-5|CEP85L', 'nc|ENSG00000111860|Q5SZL2-2|CEP85L'] 4603 11501 ALAESAGPL True PC9_epitope_Rep1 827.4388830537499 827.43778993586 49.117 2 -0.6502463192371306 0.19251253862517662 1.0 ['nc|ENSG00000143570|Q9NY26-2|SLC39A1', 'ENSG00000143570|ENST00000356205|SLC39A1'] 10513 8557 CPDQCSGHGTY True H1975_Epitope_Rep2 1166.4120933359 1166.41098993586 37.871 2 -0.6502830425278626 0.19252208748039687 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF', 'nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.I1030Sfs*36|1|0.36|ENSG00000145934|chr5:168199038-168199044|CAATCAT/-|frameshift_variant'] 18570 13682 EKWKLHSRRRR True NCI_RA007_Epitope_Rep1 1550.9018450837798 1550.9007499358602 57.232 2 -0.6503235809765795 0.19252208748039687 1.0 ['nc|ENSG00000197467|Q5TAT6-10|COL13A1', 'nc|ENSG00000197467|Q5TAT6-8|COL13A1', 'ENSG00000197467|ENST00000645393|COL13A1', 'nc|ENSG00000197467|Q5TAT6-11|COL13A1', 'nc|ENSG00000197467|Q5TAT6-9|COL13A1', 'nc|ENSG00000197467|Q5TAT6-4|COL13A1', 'nc|ENSG00000197467|Q5TAT6-3|COL13A1', 'nc|ENSG00000197467|Q5TAT6-7|COL13A1', 'nc|ENSG00000197467|Q5TAT6-2|COL13A1', 'nc|ENSG00000197467|Q5TAT6-5|COL13A1', 'nc|ENSG00000197467|Q5TAT6-6|COL13A1', 'nc|ENSG00000197467|Q5TAT6|COL13A1'] 90645 21480 RKKQHRHFLVP True PC9_epitope_Rep1 1444.85276963304 1444.8516699358602 87.464 2 -0.6504197404675488 0.19255015216446184 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 59475 9847 LGNVYFEK True H1975_Epitope_Rep1 968.4967322830399 968.49562993586 42.808 2 -0.6504676217821757 0.19257522591062945 1.0 ['ENSG00000091536|ENST00000647165|MYO15A'] 16327 9264 EEKDYKGP True H1975_Epitope_Rep3 964.4501760134398 964.44906993586 40.626 2 -0.6504690136304963 0.19257522591062945 1.0 ['ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 125314 24666 VLRVLRPLK True H1975_Epitope_Rep3 1092.74953335112 1092.74842993586 102.62 2 -0.6504722082213332 0.1925877621997609 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 43683 8647 IINKPTAA True PC9_epitope_Rep6 826.4912529797799 826.49014993586 43.087 2 -0.6505010514769258 0.19260029809961496 1.0 ['ENST00000442006.2_1_1:39174637-39175513:+|nuORF'] 30698 17372 GALRLDQLKL True PC9_epitope_Rep5 1125.68699266421 1125.6858899358601 71.822 2 -0.6506001774177433 0.19265342876216796 1.0 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000445090.5_1_2:233028172-233195406:+|nuORF', 'nc|ENSG00000144535|Q8IYB7-2|DIS3L2', 'ENST00000498319.2_1_2:233127988-233172255:+|nuORF', 'ENST00000433430.5_1_2:233125383-233196385:+|nuORF'] 65909 20161 LSLGPLFI True H1975_Epitope_Rep2 858.5214904789 858.5209449679301 83.545 1 -0.6506119187495408 0.19265342876216796 1.0 ['ENST00000483551.6_1_15:69084176-69084248:-|nuORF'] 137418 16890 YLLSALHIAV True PC9_epitope_Rep5 1098.6437308698999 1098.6426299358602 69.979 2 -0.6506202420355472 0.19265342876216796 1.0 ['ENST00000439174.6_1_17:63009934-63010009:-|nuORF'] 7812 9259 ATAAVTAAVK True PC9_epitope_Rep5 901.5232813840499 901.52218993586 40.563 2 -0.6506935047517215 0.1926659628640626 1.0 ['NRBF2-REEP3|2|fusion', 'ENSG00000165476|ENST00000373758|REEP3', 'nc|ENSG00000165476|Q6NUK4-2|REEP3'] 57197 5723 LEEVADKP True NCI_RA007_Epitope_Rep2 899.4600124211498 899.45890993586 26.878 2 -0.6507053728939486 0.192678496576778 1.0 ['ENSG00000177238|ENST00000322122|TRIM72', 'nc|ENSG00000177238|Q6ZMU5-2|TRIM72'] 55509 18132 LAVTQLPGL True PC9_epitope_Rep6 910.5487678558998 910.54766993586 82.38 2 -0.6507142432687901 0.1926880385003493 1.0 ['ENSG00000108405|ENST00000225538|P2RX1', 'ENST00000572418.1_1_17:3807220-3819678:-|nuORF'] 11594 10298 DGYFGGARV True NCI_RA007_Epitope_Rep5 940.4402800360798 940.43918993586 46.243 2 -0.650739262798871 0.1926880385003493 1.0 ['ENSG00000044446|ENST00000379942|PHKA2', 'nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 12437 7283 DKKKPSPPAP True NCI_RA007_Epitope_Rep5 1063.6025943339098 1063.6014899358602 34.69 2 -0.6507685827260109 0.19269757983141098 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 63133 16943 LNQEYSQQF True PC9_epitope_Rep4 1155.51965255559 1155.5185499358602 73.162 2 -0.6508220467517315 0.19269757983141098 1.0 ['SYCP3|p.I215Lfs*2|1|0.56|ENSG00000139351|chr12:101729123-101729123|T/-|frameshift_variant', 'ENSG00000139351|ENST00000392924|SYCP3'] 73097 7763 NDPYHAYYRHK True H1975_Epitope_Rep3 1462.6741961343798 1462.67254490379 34.845 3 -0.6508651848927746 0.1927101120804744 1.0 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1', 'SF3A1|p.R511Gfs*103|2|0.39|ENSG00000099995|chr22:30339001-30339001|G/-|frameshift_variant', 'ENST00000463818.1_1_22:30742246-30752805:-|nuORF'] 137672 16488 YMDSRRDF True NCI_RA007_Epitope_Rep5 1088.4709285413599 1088.4698299358602 70.18 2 -0.6509060165728544 0.19272264394045235 1.0 ['ENSG00000171298|ENST00000302262|GAA'] 45645 12309 ISHYLTQE True NCI_RA007_Epitope_Rep3 989.48181049489 989.48070993586 55.593 2 -0.6509782790237472 0.19276023718605445 1.0 ['ENSG00000167216|ENST00000683218|KATNAL2', 'KATNAL2|p.M73Wfs*9|1|0.3|ENSG00000167216|chr18:47052973-47052973|G/-|frameshift_variant'] 76965 12521 NVPQNDPVT True PC9_epitope_Rep3 982.4719740871799 982.47086993586 53.187 2 -0.6510106086026164 0.19276023718605445 1.0 ['ENSG00000163563|ENST00000368141|MNDA'] 117525 14275 VAFHVQEV True PC9_epitope_Rep5 927.48141657207 927.48030993586 59.912 2 -0.6510517567335686 0.19276023718605445 1.0 ['ENST00000586178.5_1_17:49296359-49302518:-|nuORF'] 74668 5764 NLHEKRHR True PC9_epitope_Rep2 1088.59515796804 1088.59406993586 27.564 2 -0.6511193383583898 0.19278230500582072 1.0 ['ENSG00000151320|ENST00000280979|AKAP6'] 10034 17804 AYTWCRMINI True PC9_epitope_Rep4 1269.5998345359299 1269.59872993586 76.516 2 -0.6512118763176771 0.19278230500582072 1.0 ['Tigger3b_dup1661|chr4:76922990-76924128:+|1.148447326952616|0.3752794373866462|1.61|502.0|87|3|anti-sense'] 30874 7392 GARKRHGPGP True PC9_epitope_Rep1 1031.5736942474698 1031.5725899358602 33.247 2 -0.6512160746851068 0.19278230500582072 1.0 ['ENST00000519028.1_1_8:22900630-22926407:-|nuORF', 'nc|ENSG00000120889|O14763-3|TNFRSF10B', 'nc|ENSG00000120889|O14763-2|TNFRSF10B', 'ENSG00000120889|ENST00000276431|TNFRSF10B'] 100018 13456 SLKASCLYGQL True PC9_epitope_Rep5 1181.61144476545 1181.60980490379 56.774 3 -0.6512631813320122 0.1928073633724991 1.0 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000489040.1_1_11:67351618-67352251:+|nuORF', 'GSTP1|p.G74Afs*20|1|0.12|ENSG00000084207|chr11:67584759-67584759|G/-|frameshift_variant'] 23297 13344 EVSFRYPNP True PC9_epitope_Rep3 1107.53490869691 1107.53380993586 56.361 2 -0.6513105685562254 0.1928073633724991 1.0 ['ENST00000511160.5_2_4:20702342-20703457:+|nuORF'] 40665 8483 HTLFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep3 1218.5703085088896 1218.56920993586 37.615 2 -0.6513937949512775 0.19283541317439623 1.0 ['CON__P02769'] 116319 10128 TVWNNWFYRRF True PC9_epitope_Rep5 1587.77351625283 1587.7718849037901 43.943 3 -0.6514291086501568 0.19284794114451567 1.0 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 133035 3793 VYVRLRPFFR True NCI_RA007_Epitope_Rep2 1351.7877097649896 1351.78606490379 19.39 3 -0.6514599377599074 0.19287299591811394 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 93794 17042 RTYKLRKEQ True NCI_RA007_Epitope_Rep4 1220.6989543302398 1220.6978499358602 73.838 2 -0.6514647214168187 0.19287299591811394 1.0 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2', 'nc|ENSG00000149930|Q9UL54-2|TAOK2', 'nc|ENSG00000149930|Q9UL54-4|TAOK2'] 67849 14573 LTIYDARP True PC9_epitope_Rep3 947.5076313199099 947.50652993586 61.182 2 -0.6515222372176225 0.19289505540553123 1.0 ['nc|ENSG00000171100|Q13496-2|MTM1', 'ENSG00000171100|ENST00000370396|MTM1'] 57642 8287 LELVRQAP True H1975_Epitope_Rep3 924.5392658013599 924.53816993586 36.86 2 -0.6515486632467595 0.19289505540553123 1.0 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 72180 23682 MRPRLWLLLAA True PC9_epitope_Rep2 1338.79583192054 1338.79472993586 96.567 2 -0.6515617822332425 0.19289505540553123 1.0 ['ENSG00000254126|ENST00000643224|CD8B2', 'nc|ENSG00000172116|P10966-7|CD8B', 'nc|ENSG00000172116|P10966-9|CD8B', 'nc|ENSG00000172116|P10966-8|CD8B', 'ENSG00000172116|ENST00000390655|CD8B', 'nc|ENSG00000172116|P10966-3|CD8B', 'nc|ENSG00000172116|P10966-2|CD8B', 'nc|ENSG00000172116|P10966-6|CD8B', 'nc|ENSG00000172116|P10966-4|CD8B'] 33248 14474 GLAFHRHKYSP True NCI_RA007_Epitope_Rep1 1311.68363861927 1311.6825499358602 60.347 2 -0.651635470464759 0.19293263187299223 1.0 ['nc|ENSG00000167600|Q96SQ9-2|CYP2S1', 'ENST00000310054.8_1_19:41712417-41712672:+|nuORF'] 4618 5217 ALANSLAC[Carbamidomethyl]QGK True NCI_RA007_Epitope_Rep5 1131.57064286206 1131.56954993586 26.763 2 -0.6516405912590566 0.19293263187299223 1.0 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA'] 104428 3074 SSIRHMIRK True NCI_RA007_Epitope_Rep4 1126.63933127914 1126.6376849037902 17.205 3 -0.6516602013752453 0.19293263187299223 1.0 ['ENSG00000108107|ENST00000344063|RPL28', 'nc|ENSG00000108107|P46779-2|RPL28', 'nc|ENSG00000108107|P46779-3|RPL28'] 129643 18651 VTHLPVGVTV True PC9_epitope_Rep4 1020.59678067748 1020.59568993586 79.818 2 -0.6517000962503131 0.19296721031641345 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 72181 22872 MRPRLWLLLAA True PC9_epitope_Rep4 1338.79583192054 1338.79472993586 96.195 2 -0.6517011574978514 0.19296721031641345 1.0 ['ENSG00000254126|ENST00000643224|CD8B2', 'nc|ENSG00000172116|P10966-7|CD8B', 'nc|ENSG00000172116|P10966-9|CD8B', 'nc|ENSG00000172116|P10966-8|CD8B', 'ENSG00000172116|ENST00000390655|CD8B', 'nc|ENSG00000172116|P10966-3|CD8B', 'nc|ENSG00000172116|P10966-2|CD8B', 'nc|ENSG00000172116|P10966-6|CD8B', 'nc|ENSG00000172116|P10966-4|CD8B'] 110172 10396 TIDKYLKRYER True H1975_Epitope_Rep3 1483.8147123584697 1483.81306490379 45.045 3 -0.651707689263366 0.19296721031641345 1.0 ['ELP1|p.K945R|1|0.4|ENSG00000070061|chr9:108893969-108893969|T/C|missense_variant'] 15062 9319 EAAQAMECETI True H1975_Epitope_Rep3 1194.4896749502598 1194.4885699358601 40.841 2 -0.6517314251433949 0.19296721031641345 1.0 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ'] 111794 10227 TLRAESINERT True NCI_RA007_Epitope_Rep1 1288.67352742804 1288.67242993586 43.792 2 -0.6517599283835719 0.19297374464651482 1.0 ['nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1'] 13297 18190 DLYFHQAL True PC9_epitope_Rep6 1005.4919812557699 1005.49088993586 82.609 2 -0.6517712130464475 0.19297374464651482 1.0 ['ENST00000473136.4_2_3:88108451-88184391:+|nuORF', 'ENSG00000175105|ENST00000636215|ZNF654'] 99205 13053 SLAVAISQTL True PC9_epitope_Rep5 1001.5757108797301 1001.5746099358599 55.214 2 -0.6517737814074014 0.19297374464651482 1.0 ['ENSG00000181240|ENST00000321510|SLC25A41'] 62291 17971 LLQNNLVEL True PC9_epitope_Rep6 1054.60225998074 1054.60116993586 81.753 2 -0.6518275892191338 0.19299878968438694 1.0 ['ENSG00000065183|ENST00000349139|WDR3'] 33471 20554 GLGPSSILFF True PC9_epitope_Rep1 1036.5593325395998 1036.55822993586 83.873 2 -0.6518291492533216 0.19299878968438694 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 12532 5534 DLARAQAV True NCI_RA007_Epitope_Rep4 842.4610154806599 842.45990993586 27.881 2 -0.6518982904625925 0.19301131162040125 1.0 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'ENST00000590558.5_1_19:5692045-5712033:-|nuORF', 'nc|ENSG00000196365|P36776-3|LONP1', 'ENST00000587552.5_1_19:5696605-5708411:-|nuORF'] 57529 18793 LEKRVKELAQ True PC9_epitope_Rep1 1212.7190210684798 1212.7179299358602 77.073 2 -0.6519374075220856 0.193054865938431 1.0 ['nc|ENSG00000118900|Q9NPG3-2|UBN1', 'ENSG00000118900|ENST00000262376|UBN1', 'ENST00000585857.1_1_16:4910827-4920335:+|nuORF'] 63030 18858 LNILDPKKQ True PC9_epitope_Rep5 1067.63389446219 1067.63278993586 77.555 2 -0.6519708519735944 0.19309542280837858 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2', 'ENST00000560620.1_1_15:44806831-44810879:+|nuORF'] 40412 14547 HRWRFTCYYYY True NCI_RA007_Epitope_Rep2 1656.72960283552 1656.72850993586 61.247 2 -0.6519733845520668 0.19309542280837858 1.0 ['ENST00000444199.1_1_19:55208384-55209490:+|nuORF', 'nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'ENSG00000244482|ENST00000396365|LILRA6', 'ENSG00000204577|ENST00000445347|LILRB3'] 26757 7677 FLDHINGK True NCI_RA007_Epitope_Rep3 942.49231560894 942.49120993586 37.316 2 -0.6520814813399736 0.1931299841747603 1.0 ['ENSG00000146007|ENST00000274712|ZMAT2'] 96742 24787 SEQIVLIGSKT True PC9_epitope_Rep5 1173.66050313285 1173.65884490379 100.49 3 -0.6520980763457265 0.1931299841747603 1.0 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 111222 12466 TLGCCICFFIM True H1975_Epitope_Rep1 1249.53676589717 1249.5356699358601 52.988 2 -0.6521130564539842 0.1931299841747603 1.0 ['nc|ENSG00000165970|Q9Y345-2|SLC6A5', 'nc|ENSG00000165970|Q9Y345-3|SLC6A5', 'ENSG00000165970|ENST00000525748|SLC6A5'] 64369 10558 LQPSLPHTGA True PC9_epitope_Rep5 1019.53999407735 1019.53888993586 45.6 2 -0.6521226644271565 0.1931299841747603 1.0 ['ENST00000397420.7_1_11:838599-838812:+|nuORF'] 129498 18664 VTEYYISGD True PC9_epitope_Rep4 1045.46040634397 1045.4593099358601 79.869 2 -0.6521478296857294 0.1931550204790865 1.0 ['ENSG00000158615|ENST00000367188|PPP1R15B'] 81608 23205 PRPFKRRWLLF True PC9_epitope_Rep4 1514.8986571962998 1514.89756993586 97.487 2 -0.6521556493153425 0.1931550204790865 1.0 ['ENST00000603928.2_2_9:136890984-136891107:+|nuORF'] 94292 11346 RWSRRTLYVQ True NCI_RA007_Epitope_Rep5 1363.74730150499 1363.7462099358602 50.293 2 -0.6522465622136789 0.19318305226740307 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 115727 7175 TVLHQALSKSQ True NCI_RA007_Epitope_Rep1 1210.6669854956199 1210.6653449037901 31.898 3 -0.652318591546351 0.19319257202252596 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 103082 7523 SQLKKFYNQ True NCI_RA007_Epitope_Rep4 1154.6084079903399 1154.60730993586 35.582 2 -0.6523299082982933 0.19319257202252596 1.0 ['ENSG00000151655|ENST00000358415|ITIH2', 'ITIH2|p.H695Tfs*6|1|0.19|ENSG00000151655|chr10:7738744-7738745|-/A|frameshift_variant', 'ITIH2|p.T482M|1|0.08|ENSG00000151655|chr10:7730117-7730117|C/T|missense_variant'] 29614 13968 FVLKKRTFTKG True H1975_Epitope_Rep1 1323.8026911227896 1323.8015899358602 58.886 2 -0.6524319851952411 0.19323311769907386 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'ENST00000493438.5_1_9:135973976-135976008:-|nuORF'] 84527 14354 QGWRKSSI True NCI_RA007_Epitope_Rep4 960.51411368268 960.5130099358599 62.521 2 -0.6524358156560361 0.19323311769907386 1.0 ['ENSG00000182631|ENST00000330120|RXFP3'] 133544 12938 WHLVGIVSWC True PC9_epitope_Rep4 1198.59573513166 1198.5940949037902 57.651 3 -0.6524522921735357 0.19324263531017793 1.0 ['TMPRSS11B|p.G388C|1|0.47|ENSG00000185873|chr4:68228000-68228000|C/A|missense_variant'] 79963 12098 PITHIHHCP True H1975_Epitope_Rep2 1053.51781916413 1053.5167299358602 51.618 2 -0.6524687048232302 0.19324263531017793 1.0 ['ENSG00000154309|ENST00000675850|DISP1'] 82029 7939 PSTPWQEQPT True H1975_Epitope_Rep2 1169.5353026197297 1169.5342099358602 35.485 2 -0.6525862399090993 0.19334522609167765 1.0 ['ENST00000315150.9_1_3:128807140-128807500:-|nuORF'] 55184 7195 LAPEYEKA True PC9_epitope_Rep1 919.4650978015899 919.46400993586 32.488 2 -0.6525875248577627 0.19334522609167765 1.0 ['ENSG00000155660|ENST00000652332|PDIA4'] 43915 8773 ILDTEDQVEI True NCI_RA007_Epitope_Rep5 1173.57649872537 1173.57540993586 40.414 2 -0.6526603248326523 0.19337325101603947 1.0 ['nc|ENSG00000044459|Q9NXG0|CNTLN', 'ENSG00000044459|ENST00000380647|CNTLN'] 69361 10686 LVQATALHHSQ True H1975_Epitope_Rep1 1203.6360197205101 1203.63492993586 46.063 2 -0.6526667019057032 0.19338276354160203 1.0 ['PCDH11X|p.P1235Q|1|0.5|ENSG00000102290|chrX:92618600-92618600|C/A|missense_variant'] 62461 16692 LLSLIHLV True PC9_epitope_Rep5 906.59023874506 906.58914993586 69.21 2 -0.652669639973975 0.19338276354160203 1.0 ['ENSG00000243896|ENST00000641841|OR2A7', 'ENSG00000180658|ENST00000315453|OR2A4'] 35308 3525 GSSGKTSK True NCI_RA007_Epitope_Rep2 750.38718183406 750.38608993586 18.361 2 -0.6528629197453814 0.19350385456576027 1.0 ['ENST00000550612.1_1_12:31014923-31015109:+|nuORF'] 74344 14820 NIPYENFY True H1975_Epitope_Rep2 1058.47091145802 1058.4698099358602 62.162 2 -0.6528868767299846 0.1935163642004033 1.0 ['ENST00000513085.1_1_5:95728707-95748688:-|nuORF', 'nc|ENSG00000175426|P29120-2|PCSK1', 'ENSG00000175426|ENST00000311106|PCSK1'] 100883 7252 SLSHGLPP True NCI_RA007_Epitope_Rep4 806.42865272322 806.42754993586 34.53 2 -0.6529267819424673 0.19354138230549697 1.0 ['nc|ENSG00000159692|Q13363|CTBP1', 'ENSG00000159692|ENST00000382952|CTBP1', 'ENST00000514596.1_1_4:1206030-1206831:-|nuORF'] 132632 8698 VYQEEDEAY True H1975_Epitope_Rep1 1144.4560492395196 1144.4549499358602 38.387 2 -0.6529372703864316 0.19354138230549697 1.0 ['ENSG00000156232|ENST00000286760|WHAMM'] 72134 12393 MREREREQRWR True H1975_Epitope_Rep3 1630.8222744337397 1630.82116993586 52.858 2 -0.6529573403804123 0.1935508887303409 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 49 15879 AAAFHPGLAAA True PC9_epitope_Rep3 995.5188647099498 995.51776993586 66.227 2 -0.6529607023648183 0.1935508887303409 1.0 ['ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'nc|ENSG00000125166|P00505-2|GOT2'] 36993 12446 GVRRSFRK True NCI_RA007_Epitope_Rep3 1004.5991807193199 1004.59808993586 56.175 2 -0.653182525706774 0.19371849554090734 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 85100 20666 QIRLLRILLII True H1975_Epitope_Rep2 1362.9438760532198 1362.9422249037902 85.6 3 -0.6532489134887738 0.19374350543604696 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 66527 12322 LSSFDYEQFRD True NCI_RA007_Epitope_Rep2 1405.6150094924099 1405.6139099358602 52.533 2 -0.6532762325690743 0.19374350543604696 1.0 ['nc|ENSG00000253159|O60330-2|PCDHGA12', 'ENSG00000253159|ENST00000252085|PCDHGA12'] 89892 1867 RFRFRGRPY True NCI_RA007_Epitope_Rep2 1253.6893927060498 1253.6877449037902 10.172 3 -0.6533429907729028 0.19376250368325554 1.0 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'ZFC3H1|p.I881Ffs*9|2|0.18|ENSG00000133858|chr12:71633308-71633308|T/-|frameshift_variant', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'ENST00000549407.1_1_12:72054197-72057036:-|nuORF'] 74952 5316 NLTVMDRDQPH True H1975_Epitope_Rep3 1324.6193836802 1324.61828993586 25.524 2 -0.6533514176741342 0.19376250368325554 1.0 ['nc|ENSG00000179242|P55283-2|CDH4', 'ENSG00000179242|ENST00000614565|CDH4'] 125295 13083 VLRSTVPVNTN True H1975_Epitope_Rep1 1198.6669854956199 1198.6658899358602 55.413 2 -0.6533664513163977 0.19376250368325554 1.0 ['ENSG00000188157|ENST00000379370|AGRN', 'nc|ENSG00000188157|O00468-7|AGRN', 'nc|ENSG00000188157|O00468-3|AGRN', 'nc|ENSG00000188157|O00468-5|AGRN', 'nc|ENSG00000188157|O00468-4|AGRN', 'nc|ENSG00000188157|O00468|AGRN', 'nc|ENSG00000188157|O00468-2|AGRN', 'ENST00000461111.1_1_1:988956-990358:+|nuORF'] 38567 13021 HHFLCLHSI True NCI_RA007_Epitope_Rep3 1105.54911929241 1105.54802993586 58.488 2 -0.6533849070972443 0.19376250368325554 1.0 ['chr6:109250991-109254448|382|11.17|0.13|6.42|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|8'] 749 10983 AAVQLRYL True H1975_Epitope_Rep3 932.5443511818 932.54324993586 47.335 2 -0.6533938165094108 0.19377200192298746 1.0 ['ENSG00000116218|ENST00000367615|NPHS2', 'nc|ENSG00000116218|Q9NP85-2|NPHS2'] 80667 13195 PLPPVPASP True PC9_epitope_Rep1 873.4960040070499 873.49490993586 55.617 2 -0.6534277342540227 0.19377200192298746 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 139650 6571 YTSETYLMKHM True NCI_RA007_Epitope_Rep2 1402.6261088534202 1402.6250099358601 30.173 2 -0.6534524252898265 0.1937784945569581 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 97235 11172 SFLRAILAEFR True NCI_RA007_Epitope_Rep1 1321.7506555499297 1321.7490149037899 47.456 3 -0.6534544190005009 0.1937784945569581 1.0 ['ENSG00000085840|ENST00000371568|ORC1'] 112798 18347 TPLQPPSEP True PC9_epitope_Rep1 964.48656152216 964.48546993586 75.361 2 -0.6534753211298256 0.1937784945569581 1.0 ['nc|ENSG00000167566|Q9HCH0-2|NCKAP5L', 'ENSG00000167566|ENST00000335999|NCKAP5L'] 38405 5305 HGLLTPGG True NCI_RA007_Epitope_Rep4 750.4024379753799 750.40134993586 26.961 2 -0.6535313083921981 0.19380698381194567 1.0 ['nc|ENSG00000186684|Q4G0S4-1|CYP27C1', 'ENSG00000186684|ENST00000664447|CYP27C1', 'nc|ENSG00000186684|Q4G0S4|CYP27C1'] 90437 11752 RIQRRYFRFFT True PC9_epitope_Rep2 1588.8738990004395 1588.8722549037898 50.536 3 -0.6535318273933884 0.19380698381194567 1.0 ['ENSG00000101407|ENST00000373447|TTI1', 'ENST00000487362.1_1_20:36640605-36642218:-|nuORF'] 72760 10441 NADPLNEKEK True H1975_Epitope_Rep3 1156.57241640444 1156.5713099358602 45.221 2 -0.6535528764996399 0.19380698381194567 1.0 ['ENST00000583470.1_1_17:30439414-30439573:-|nuORF'] 20175 6710 ENQNLSQVS True PC9_epitope_Rep1 1017.47270236317 1017.47160993586 30.613 2 -0.6535549917309647 0.19380698381194567 1.0 ['nc|ENSG00000215695|Q92681|RSC1A1'] 41470 9014 IAYFVFDL True PC9_epitope_Rep3 986.5113197180199 986.51022993586 39.616 2 -0.6535699602425958 0.19380698381194567 1.0 ['ENST00000484268.1_1_7:48352666-48443694:+|nuORF'] 121616 20509 VGLEASLLV True PC9_epitope_Rep4 899.53278343859 899.53168993586 87.037 2 -0.6536182206576922 0.19380698381194567 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant'] 100863 19158 SLSFQQKKV True PC9_epitope_Rep1 1063.60259433391 1063.6014899358602 78.485 2 -0.6537257373408798 0.19387549422435849 1.0 ['ENST00000311177.6_1_17:46699388-46699802:-|nuORF'] 33641 11306 GLNPISTV True PC9_epitope_Rep3 799.4439684341901 799.44286993586 48.494 2 -0.6537494181905856 0.19387549422435849 1.0 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 30747 6360 GANTSRKP True PC9_epitope_Rep3 829.44061438925 829.43950993586 29.49 2 -0.6537780371655355 0.19387549422435849 1.0 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A', 'nc|ENSG00000169302|Q8WU08-2|STK32A'] 63761 20808 LPRRRPRRHPS True NCI_RA007_Epitope_Rep5 1426.8494155880999 1426.84777490379 87.019 3 -0.6538189771442351 0.1939190027288514 1.0 ['nc|ENSG00000138685|P09038|FGF2'] 68440 10490 LTTNVTEQTEK True H1975_Epitope_Rep1 1262.6354105838197 1262.63430993586 45.305 2 -0.6538764361051846 0.19396250988418065 1.0 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162360026-162361742:-|nuORF'] 12463 13999 DKRLLNCFAR True NCI_RA007_Epitope_Rep5 1234.6604606465398 1234.65936993586 60.533 2 -0.6539062104078611 0.19397500697696052 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 136195 20363 YGLHKGAL True PC9_epitope_Rep1 857.4759372688098 857.47484993586 83.156 2 -0.6539533547458133 0.1940185119149134 1.0 ['ENST00000397601.5_1_13:97999167-98009782:+|nuORF'] 19170 11714 ELKENYQMLT True NCI_RA007_Epitope_Rep3 1267.61183868827 1267.6107499358602 53.189 2 -0.6540052287116684 0.194031007751938 1.0 ['SMC4|p.K1145E|1|0.11|ENSG00000113810|chr3:160432418-160432418|A/G|missense_variant'] 39144 9491 HLEAFVLM True H1975_Epitope_Rep2 958.49462410806 958.49352993586 41.476 2 -0.6540190459151637 0.1940344784819546 1.0 ['GLB1L3|p.D142H|1|0.15|ENSG00000166105|chr11:134281438-134281438|G/C|missense_variant'] 4761 8097 ALEELNRRYH True H1975_Epitope_Rep1 1299.66838247795 1299.66728993586 36.09 2 -0.6540496986232702 0.1940344784819546 1.0 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 117474 5030 VAEAQGGK True NCI_RA007_Epitope_Rep2 758.3922672144998 758.39116993586 24.19 2 -0.6540512497793878 0.1940344784819546 1.0 ['ENST00000372386.6_1_9:133355254-133376405:+|nuORF'] 514 4428 AAPLPQKVP True NCI_RA007_Epitope_Rep4 919.5491022090699 919.54800993586 23.394 2 -0.6540771612648111 0.1940344784819546 1.0 ['nc|ENSG00000147650|Q9Y561-2|LRP12', 'ENSG00000147650|ENST00000276654|LRP12', 'ENST00000518375.1_1_8:105502903-105507508:-|nuORF'] 56098 9958 LDLLSHELSKR True NCI_RA007_Epitope_Rep1 1309.73539940861 1309.73374490379 42.738 3 -0.6541676457628001 0.1941029655696281 1.0 ['ARF5|p.W172L|1|0.16|ENSG00000004059|chr7:127591271-127591271|G/T|missense_variant'] 17258 5474 EHARATVER True NCI_RA007_Epitope_Rep2 1067.54720471611 1067.5461099358602 25.91 2 -0.6542038487277037 0.1941029655696281 1.0 ['ENSG00000185085|ENST00000330574|INTS5'] 87558 9794 QTLSLRGSL True PC9_epitope_Rep4 973.5556441414899 973.55454993586 45.314 2 -0.6542067409364575 0.1941029655696281 1.0 ['LRRC36|p.H344R|1|0.25|ENSG00000159708|chr16:67367293-67367293|A/G|missense_variant'] 2 5221 AAAAAAAAAAA True PC9_epitope_Rep2 799.41881631551 799.41770993586 25.472 2 -0.6542571566458969 0.19412795113860082 1.0 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 130226 10875 VTSLIPAT True PC9_epitope_Rep5 800.4643695256 800.46326993586 46.819 2 -0.6542581512551714 0.19412795113860082 1.0 ['ENST00000515156.2_1_5:68927792-68932223:+|nuORF', 'ENST00000545024.1_5:69806308-69808341:+|nuORF'] 85103 20268 QIRLLRILLII True H1975_Epitope_Rep3 1362.9438760532198 1362.9422249037902 84.759 3 -0.654276915209821 0.19413141537364562 1.0 ['ENST00000595463.5_1_19:50414393-50430957:-|nuORF', 'ENST00000599788.1_2_19:50414393-50432585:-|nuORF', 'ENST00000596437.5_1_19:50414393-50430957:-|nuORF'] 107435 13964 SYVKDLVVQR True PC9_epitope_Rep4 1205.6768219033297 1205.6751749037899 61.615 3 -0.6542810237487788 0.19413141537364562 1.0 ['ENSG00000141959|ENST00000349048|PFKL', 'nc|ENSG00000141959|P17858-2|PFKL', 'ENST00000397961.6_1_21:45725201-45746742:+|nuORF', 'ENST00000466134.5_1_21:45735979-45739299:+|nuORF'] 134298 20894 WRTRSLLKRKT True H1975_Epitope_Rep1 1443.8786500277097 1443.87700490379 86.812 3 -0.6542992705366099 0.19413141537364562 1.0 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 64701 27193 LRLLRLKLK True NCI_RA007_Epitope_Rep3 1151.8230326445498 1151.82139490379 119.48 3 -0.6543275249426691 0.19413141537364562 1.0 ['ENSG00000105329|ENST00000221930|TGFB1'] 136139 6740 YGGLRGAI True PC9_epitope_Rep2 805.4446371405298 805.44354993586 31.333 2 -0.6543633145265745 0.1941594072604396 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 117607 13308 VAGTSEMAGAV True PC9_epitope_Rep5 991.4644461785898 991.46334993586 56.201 2 -0.6543673743979278 0.19417189800821513 1.0 ['ENST00000500161.2_1_19:58653993-58666470:-|nuORF'] 20402 6194 EPLSPGEIRFI True H1975_Epitope_Rep1 1256.67648755016 1256.67484490379 28.894 3 -0.6544033781642977 0.19418438836877674 1.0 ['ENSG00000183354|ENST00000399933|KIAA2026'] 76139 21912 NRQQPPISL True PC9_epitope_Rep4 1051.57744221523 1051.5763499358602 92.495 2 -0.6544665999125207 0.19424036702935615 1.0 ['nc|ENSG00000165626|Q8N7W2-3|BEND7', 'nc|ENSG00000165626|Q8N7W2-2|BEND7', 'ENSG00000165626|ENST00000466271|BEND7'] 134602 15489 WWDIYYTLFEK True NCI_RA007_Epitope_Rep1 1562.7445671099797 1562.74346993586 64.331 2 -0.6544819543358855 0.19424036702935615 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 59746 13555 LGVTEAFK True PC9_epitope_Rep3 863.4752685624699 863.47416993586 57.194 2 -0.6545397583206816 0.19426835505819992 1.0 ['CNOT1-GOT2|1|fusion', 'ENST00000450663.1_1_1:173111181-173111367:-|nuORF', 'ENST00000492378.1_1_16:58756047-58768228:-|nuORF', 'ENST00000564400.5_1_16:58750074-58768228:-|nuORF', 'ENST00000496461.5_1_16:58752244-58768198:-|nuORF', 'ENSG00000125166|ENST00000245206|GOT2', 'nc|ENSG00000125166|P00505-2|GOT2'] 33578 13973 GLKTSSSLP True PC9_epitope_Rep1 888.4916469026 888.49054993586 58.585 2 -0.6545549646625967 0.1942778320236822 1.0 ['ENSG00000087074|ENST00000200453|PPP1R15A'] 5025 5974 ALLESSCENKR True NCI_RA007_Epitope_Rep1 1248.6132356706 1248.6115949037899 27.283 3 -0.6545813685460886 0.1942778320236822 1.0 ['nc|ENSG00000132561|O00339-3|MATN2', 'nc|ENSG00000132561|O00339-2|MATN2', 'ENSG00000132561|ENST00000254898|MATN2', 'MATN2-C8orf47|3|fusion', 'MATN2-C8orf47|2|fusion', 'MATN2-C8orf47|1|fusion'] 81803 14510 PSFHVYVL True PC9_epitope_Rep5 960.50690304392 960.50580993586 60.812 2 -0.6546775493719995 0.19432131676017483 1.0 ['ENSG00000182308|ENST00000333141|DCAF4L1'] 3262 19093 AGFEWNATYVL True PC9_epitope_Rep1 1269.60298825673 1269.60188993586 78.231 2 -0.6547112912442761 0.19434070446762022 1.0 ['nc|ENSG00000154025|A0PJK1-5|SLC5A10', 'nc|ENSG00000154025|A0PJK1-3|SLC5A10', 'nc|ENSG00000154025|A0PJK1-2|SLC5A10', 'ENSG00000154025|ENST00000395645|SLC5A10', 'nc|ENSG00000154025|A0PJK1-4|SLC5A10'] 23803 6837 EYLEKEKLKKE True PC9_epitope_Rep2 1435.7922455783898 1435.79059490379 31.703 3 -0.654731595650103 0.19434070446762022 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 63784 15395 LPSICAVALPF True PC9_epitope_Rep5 1129.6205528971698 1129.61890490379 64.224 3 -0.6547694977517211 0.19434070446762022 1.0 ['ENSG00000112337|ENST00000377850|SLC17A2', 'nc|ENSG00000112337|O00624|SLC17A2'] 123706 15940 VIPNLIEHSTV True PC9_epitope_Rep5 1220.6764875501601 1220.67538993586 66.303 2 -0.6548168914073615 0.19434070446762022 1.0 ['ENSG00000134007|ENST00000256389|ADAM20'] 117482 19339 VAEFLYQVL True PC9_epitope_Rep4 1080.58554728744 1080.5844499358602 82.496 2 -0.6548294121869187 0.19434070446762022 1.0 ['ENSG00000144867|ENST00000678299|SRPRB'] 131723 17700 VWVWVCLRRRL True NCI_RA007_Epitope_Rep3 1484.8550781321599 1484.85343490379 77.607 3 -0.6548335211383356 0.19434070446762022 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 84139 8362 QEQRRVDP True H1975_Epitope_Rep3 1026.5206556150997 1026.5195499358601 37.147 2 -0.6548582040524906 0.19434070446762022 1.0 ['nc|ENSG00000168256|Q9NYR9-3|NKIRAS2', 'nc|ENSG00000168256|Q9NYR9-2|NKIRAS2', 'ENSG00000168256|ENST00000393885|NKIRAS2'] 100968 5850 SLSSRALWAR True PC9_epitope_Rep1 1145.63054041725 1145.62888490379 27.316 3 -0.6548848994258842 0.19434070446762022 1.0 ['CTNND1|p.L272Sfs*14|1|0.19|ENSG00000198561|chr11:57796848-57796849|-/T|frameshift_variant'] 10419 8581 CLRETYETLAS True H1975_Epitope_Rep1 1284.60200228056 1284.60090993586 37.933 2 -0.6549012619106763 0.19434070446762022 1.0 ['ENSG00000154845|ENST00000400556|PPP4R1', 'PPP4R1|p.Y898Ffs*24|1|0.26|ENSG00000154845|chr18:9547948-9547949|AT/-|frameshift_variant', 'nc|ENSG00000154845|Q8TF05-2|PPP4R1', 'ENST00000577667.1_1_18:9557167-9559563:-|nuORF', 'ENST00000285124.12_1_18:9547789-9562973:-|nuORF'] 80897 18781 PLYIGEVVL True NCI_RA007_Epitope_Rep5 1001.57973363101 1001.57862993586 79.077 2 -0.6549065779694647 0.19435318911547758 1.0 ['ENSG00000255154|ENST00000461393|HTD2'] 137421 11507 YLLSRILCAP True NCI_RA007_Epitope_Rep1 1147.64235097091 1147.64124993586 48.726 2 -0.6549273663009217 0.19436266154275267 1.0 ['ENST00000379066.5_1_2:37543393-37543606:-|nuORF'] 60295 10576 LIERLEDLK True PC9_epitope_Rep3 1127.6550238295897 1127.6533649037901 45.628 3 -0.6549585182313914 0.19436266154275267 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 75280 6581 NPRRWWRWCWQ True H1975_Epitope_Rep1 1672.7946031339197 1672.7929649037899 30.373 3 -0.6550128081030734 0.19439064073758425 1.0 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 134300 20166 WRTRSLLKRKT True NCI_RA007_Epitope_Rep4 1443.8786500277097 1443.87700490379 87.26 3 -0.6551096217250173 0.19442808887787041 1.0 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 139158 13743 YSSCSTIFLY True H1975_Epitope_Rep2 1182.52671208198 1182.52560993586 58.009 2 -0.6551254954135969 0.19442808887787041 1.0 ['ENST00000426799.1_1_X:65041564-65042074:-|nuORF'] 20130 11283 ENLLKSLQAPE True H1975_Epitope_Rep1 1240.66631678928 1240.66520993586 48.377 2 -0.6551409049287624 0.19442808887787041 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 12750 10248 DLGRFKGP True H1975_Epitope_Rep2 888.4817509252399 888.48064993586 44.424 2 -0.655288295629096 0.19449953517198637 1.0 ['OR2T1|p.A303D|3|0.19|ENSG00000175143|chr1:248407055-248407055|C/A|missense_variant'] 53027 22760 KRRWRKKRRKE True NCI_RA007_Epitope_Rep3 1626.0178778955299 1626.01678993586 98.953 2 -0.655288883725524 0.19449953517198637 1.0 ['nc|ENSG00000290320|P0DW85|H2BN1'] 6532 5957 APVDSHVP True H1975_Epitope_Rep3 820.40791727864 820.40682993586 27.926 2 -0.6553564055542149 0.1945430036720844 1.0 ['SPEN|p.E2353D|1|0.14|ENSG00000065526|chr1:15933299-15933299|G/C|missense_variant'] 80666 13100 PLPPVPASP True PC9_epitope_Rep1 873.4960040070499 873.49490993586 55.257 2 -0.6554090022803473 0.19455548325121627 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 28463 10256 FSEQLSHPM True PC9_epitope_Rep4 1074.4804305958999 1074.47932993586 47.131 2 -0.6554492630055289 0.19456494794248885 1.0 ['nc|ENSG00000146147|Q5VWP3-2|MLIP'] 2192 4658 AENEMSSFK True H1975_Epitope_Rep2 1041.44371073401 1041.4426099358602 23.014 2 -0.655451005090683 0.19456494794248885 1.0 ['ENST00000571006.5_1_16:46521999-46540142:-|nuORF', 'ENST00000566201.6_1_16:46508202-46534771:-|nuORF'] 108749 8595 TENRVLQNSRH True NCI_RA007_Epitope_Rep1 1352.6909088276798 1352.68980993586 37.434 2 -0.6554688581153402 0.1945774266015958 1.0 ['nc|ENSG00000142208|P31749-2|AKT1', 'ENSG00000142208|ENST00000649815|AKT1', 'ENST00000556836.1_1_14:105241211-105241541:-|nuORF', 'ENST00000557552.1_1_14:105241211-105241541:-|nuORF'] 11374 10772 DFHHHHFP True H1975_Epitope_Rep3 1072.4627468161602 1072.4616499358601 46.515 2 -0.655490182596324 0.19460238275984942 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 134963 7872 YAFWGAASF True NCI_RA007_Epitope_Rep3 1018.4548674710599 1018.45376993586 38.083 2 -0.6555386455922267 0.19460238275984942 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 65247 10416 LSEFESQI True H1975_Epitope_Rep2 951.4549270407099 951.45382993586 45.079 2 -0.655591122223096 0.19463981409759876 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant'] 18141 19150 EINEKSNILSN True PC9_epitope_Rep4 1259.63574493699 1259.6346499358601 81.757 2 -0.6556027883235891 0.19463981409759876 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000467263.1_1_3:160130128-160131402:+|nuORF'] 12815 8050 DLKGPEVDLKG True PC9_epitope_Rep1 1169.62920300457 1169.6275649037902 35.786 3 -0.6556186349790771 0.19463981409759876 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 107783 5401 TAMEEAIK True NCI_RA007_Epitope_Rep4 891.4371688015899 891.43606993586 27.345 2 -0.6556487683648822 0.1946522904370188 1.0 ['RYR2|p.A2345T|1|0.4|ENSG00000198626|chr1:237639119-237639119|G/A|missense_variant'] 21325 12021 ERKYYYYERHR True NCI_RA007_Epitope_Rep1 1661.80627293309 1661.8046249037898 50.746 3 -0.6556816634226594 0.19468025777667616 1.0 ['TOPORS|p.G873Vfs*29|1|0.11|ENSG00000197579|chr9:32541889-32541907|GTTGTATCAGTAGCTTTTC/-|frameshift_variant', 'nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 74306 15773 NILDIVRPP True PC9_epitope_Rep2 1035.6076797143498 1035.60658993586 65.935 2 -0.6557398635383231 0.19468409721039018 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 101886 13992 SPLGLAGL True H1975_Epitope_Rep3 726.42759009406 726.4270449679301 59.139 1 -0.6557614909111842 0.19468409721039018 1.0 ['nc|ENSG00000197558|A2VEC9|SSPOP', 'nc|ENSG00000197558|A2VEC9-2|SSPOP'] 126220 14440 VPGSVANQ True PC9_epitope_Rep4 770.3922672145 770.39116993586 63.452 2 -0.6557758028198234 0.19468409721039018 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 120546 15610 VGAALQASV True PC9_epitope_Rep6 814.45486747106 814.45376993586 72.249 2 -0.6557813148372035 0.19468409721039018 1.0 ['ENSG00000007520|ENST00000007390|TSR3'] 99745 5362 SLGKKDKE True PC9_epitope_Rep2 903.5025459394699 903.50144993586 26.013 2 -0.6557945500420899 0.19468409721039018 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'ENST00000342835.8_1_14:65216026-65230503:-|nuORF'] 48408 18910 KEDLKDTYAS True PC9_epitope_Rep4 1168.5611830144 1168.56008993586 80.823 2 -0.6558073160416579 0.19468409721039018 1.0 ['nc|ENSG00000215375|Q02045-2|MYL5', 'ENSG00000215375|ENST00000400159|MYL5'] 119497 13941 VEQLDGSLE True PC9_epitope_Rep3 988.4713053808399 988.47020993586 58.7 2 -0.6558203319674893 0.19468409721039018 1.0 ['nc|ENSG00000119042|Q9UPW6-2|SATB2', 'ENSG00000119042|ENST00000417098|SATB2'] 101317 7337 SLYLHNWKS True NCI_RA007_Epitope_Rep2 1146.5821932425 1146.58108993586 33.162 2 -0.6558283416645743 0.19468409721039018 1.0 ['ENST00000482945.5_1_15:58889748-58902828:-|nuORF'] 115770 21689 TVLRIERCML True PC9_epitope_Rep3 1232.67333382936 1232.67222993586 88.721 2 -0.6558418594739173 0.19468409721039018 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2'] 44951 23405 IQFRWWQPYHS True NCI_RA007_Epitope_Rep2 1546.74696715182 1546.7458699358601 97.932 2 -0.6558662045467587 0.19469657073820515 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 115977 10425 TVQFAALTASQ True PC9_epitope_Rep1 1135.5873381925899 1135.58569490379 44.986 3 -0.655895122185748 0.19474002137447144 1.0 ['nc|ENSG00000223519|B7ZC32|KIF28P'] 118953 10896 VEETHTKEFI True NCI_RA007_Epitope_Rep2 1231.60846755999 1231.60736993586 46.991 2 -0.6559265703024055 0.1947464609856581 1.0 ['ENST00000553115.1_1_12:55517552-55517885:-|nuORF'] 126443 11046 VPLPTELL True NCI_RA007_Epitope_Rep2 880.52696978216 880.52586993586 47.564 2 -0.6559267651535342 0.1947464609856581 1.0 ['ENSG00000145217|ENST00000398516|SLC26A1'] 39338 9068 HLSQKYKRIK True NCI_RA007_Epitope_Rep2 1299.77753900411 1299.77590490379 39.876 3 -0.6559353164603843 0.1947464609856581 1.0 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF', 'ENST00000415279.1_1_1:106435599-106436040:+|nuORF'] 12157 7070 DIKFQHFNP True NCI_RA007_Epitope_Rep5 1144.56654317836 1144.5654499358602 33.876 2 -0.6559763087402913 0.19477442036953863 1.0 ['ENSG00000147459|ENST00000276440|DOCK5'] 2591 5628 AESHKSGARHC True H1975_Epitope_Rep2 1181.5359884094098 1181.5343549037902 26.647 3 -0.656067269935458 0.19478085798358372 1.0 ['nc|ENSG00000183696|Q16831-2|UPP1'] 123154 14113 VHFNVDIE True PC9_epitope_Rep2 971.4712458111899 971.47014993586 59.559 2 -0.6560686544263151 0.19478085798358372 1.0 ['ENSG00000186063|ENST00000340020|AIDA', 'nc|ENSG00000186063|Q96BJ3-2|AIDA', 'ENST00000514881.1_1_4:159199390-159199825:+|nuORF', 'ENST00000456674.1_1_2:11448506-11449064:+|nuORF'] 76997 9747 NVSVVDLTC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep2 1161.58120754576 1161.58010993586 42.534 2 -0.6560850382490344 0.19478085798358372 1.0 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF'] 108758 3956 TENWLSEWWLK True NCI_RA007_Epitope_Rep2 1490.7194149913 1490.71777490379 20.025 3 -0.6560963077588203 0.1947903115901629 1.0 ['nc|ENSG00000095321|P43155-3|CRAT', 'ENSG00000095321|ENST00000318080|CRAT', 'nc|ENSG00000095321|P43155-2|CRAT'] 32338 7251 GGCAGCCGCC True NCI_RA007_Epitope_Rep3 832.17945727424 832.17834993586 35.632 2 -0.6561027934277588 0.1947903115901629 1.0 ['ENST00000292524.5_1_8:145748060-145748543:+|nuORF'] 41504 14863 IDAEHPSDDYF True PC9_epitope_Rep6 1307.53061116211 1307.52950993586 69.147 2 -0.656104056433943 0.19480278134824153 1.0 ['ENSG00000154262|ENST00000284425|ABCA6', 'nc|ENSG00000154262|Q8N139-2|ABCA6', 'ABCA6|p.G1034Afs*30|1|0.12|ENSG00000154262|chr17:69097939-69097939|C/-|frameshift_variant'] 63423 14118 LPGLVQIAA True PC9_epitope_Rep5 880.5382031721999 880.53710993586 59.316 2 -0.6561351277681781 0.19482771970576848 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA'] 3784 16230 AGVEIPEPVF True PC9_epitope_Rep2 1056.54916177872 1056.5480699358602 67.674 2 -0.6561455399462762 0.19482771970576848 1.0 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'nc|ENSG00000164347|Q969S9-5|GFM2', 'nc|ENSG00000164347|Q969S9-4|GFM2', 'ENST00000515125.5_1_5:74021945-74032693:-|nuORF', 'ENST00000514734.5_1_5:74026495-74034184:-|nuORF'] 85545 18401 QLLCSMRWRTW True PC9_epitope_Rep3 1478.7274946605398 1478.7263899358602 75.987 2 -0.6562168581004106 0.19483113705693803 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 129605 8763 VTGRRPQLFT True H1975_Epitope_Rep1 1173.6618405455297 1173.6607499358602 38.637 2 -0.6562249652945292 0.19483113705693803 1.0 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18'] 59406 18705 LGLRHRSRRP True PC9_epitope_Rep2 1246.7483045645 1246.7472099358602 77.321 2 -0.656240769703518 0.19483113705693803 1.0 ['ENST00000368069.7_1_1:160312956-160313031:-|nuORF'] 135862 9701 YERAEWRENIR True NCI_RA007_Epitope_Rep2 1520.7484237037995 1520.74678490379 42.354 3 -0.6562559981802993 0.19483113705693803 1.0 ['nc|ENSG00000186716|P11274-2|BCR', 'ENSG00000186716|ENST00000305877|BCR', 'ENST00000487968.5_1_22:23626151-23631864:+|nuORF'] 24669 19483 FATEFTKVF True PC9_epitope_Rep5 1088.55424715916 1088.5531499358601 79.994 2 -0.656295861695227 0.19484058778897817 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 135441 5989 YDYFQIKMQNY True H1975_Epitope_Rep2 1511.67550157399 1511.67440993586 28.015 2 -0.656327575755905 0.19484058778897817 1.0 ['ENSG00000205413|ENST00000379958|SAMD9'] 58746 22529 LFLLQPTV True PC9_epitope_Rep3 929.55860426361 929.55750993586 91.934 2 -0.65641014066975 0.1949863743342004 1.0 ['NXPH1|p.V201Lfs*37|1|0.33|ENSG00000122584|chr7:8751553-8751553|G/-|frameshift_variant', 'ENSG00000122584|ENST00000405863|NXPH1'] 90221 24889 RHLAHRLRRRH True PC9_epitope_Rep3 1506.89809711602 1506.89644490379 101.11 3 -0.6564116421725907 0.1949863743342004 1.0 ['nc|ENSG00000141644|Q9UIS9-9|MBD1'] 14912 20193 DYKGDATVFFI True PC9_epitope_Rep5 1274.6183039676998 1274.61720993586 82.718 2 -0.6564495517824791 0.1949863743342004 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 15847 6646 EDLKYLPMLQE True H1975_Epitope_Rep1 1377.6850036285298 1377.6833549037901 30.617 3 -0.6564703394063199 0.194992800408751 1.0 ['ENST00000465204.5_1_2:48035118-48035199:-|nuORF'] 133835 7706 WLWRKVWQLWR True NCI_RA007_Epitope_Rep5 1655.9201209168698 1655.91847490379 36.344 3 -0.656478334916191 0.194992800408751 1.0 ['PDE4DIP|p.R930Sfs*80|1|0.35|ENSG00000178104|chr1:148981371-148981371|G/-|frameshift_variant'] 121952 14969 VGPRRKLNEI True NCI_RA007_Epitope_Rep5 1180.70403971068 1180.70294993586 64.244 2 -0.6564891482100077 0.194992800408751 1.0 ['ENST00000586695.1_1_18:77287338-77287574:+|nuORF'] 119419 12215 VEPAPVRRILK True H1975_Epitope_Rep1 1276.7979400955198 1276.79684993586 52.007 2 -0.6565829711875536 0.19501168893499093 1.0 ['ENSG00000073734|ENST00000650372|ABCB11'] 125343 12677 VLSKGNIY True H1975_Epitope_Rep2 892.5018176634799 892.50072993586 53.863 2 -0.6566228132430648 0.19501168893499093 1.0 ['ENST00000366844.7_2_1:225684839-225684929:-|nuORF'] 108187 7900 TDVQNNKF True PC9_epitope_Rep1 964.4614094034799 964.46030993586 35.212 2 -0.656622932589028 0.19501168893499093 1.0 ['ENSG00000150054|ENST00000683449|MPP7', 'nc|ENSG00000150054|Q5T2T1-2|MPP7'] 121801 11710 VGNALLNVVL True NCI_RA007_Epitope_Rep3 1010.61243074162 1010.61132993586 53.174 2 -0.6566338100845825 0.19501168893499093 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 125088 25628 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 103.6 3 -0.6566872591869817 0.19502415159772107 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 140764 12345 YYRFWYPKWEM True NCI_RA007_Epitope_Rep4 1667.7595059814696 1667.75840993586 54.483 2 -0.6567819678211182 0.19504907576555097 1.0 ['nc|ENSG00000180481|Q4G1C9-6|GLIPR1L2', 'nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2', 'ENSG00000180481|ENST00000550916|GLIPR1L2'] 44041 20169 ILLCMSLLLF True PC9_epitope_Rep6 1164.6650605614398 1164.6639699358602 90.254 2 -0.6568018635910617 0.19504907576555097 1.0 ['ENSG00000186160|ENST00000334194|CYP4Z1', 'nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P', 'nc|ENSG00000290456|Q8N1L4|CYP4Z2P'] 58031 11880 LERGRGNLQWK True H1975_Epitope_Rep1 1355.7422161245497 1355.74110993586 50.696 2 -0.6568676383521617 0.1950615372706866 1.0 ['FCGRT|p.E198Q|1|0.24|ENSG00000104870|chr19:49514477-49514477|G/C|missense_variant'] 82773 9449 PVRKYRAA True NCI_RA007_Epitope_Rep5 959.5664836087099 959.56538993586 42.982 2 -0.6568891689135309 0.19507399838999318 1.0 ['TCL1B|p.G93V|1|0.14|ENSG00000213231|chr14:95690851-95690851|G/T|missense_variant'] 34296 15943 GPPGACPLPSL True PC9_epitope_Rep2 1007.51100244819 1007.50990993586 66.573 2 -0.6569457655827754 0.1951019397185628 1.0 ['nc|ENSG00000179094|O15534-4|PER1'] 66330 8260 LSQNGLAA True H1975_Epitope_Rep2 772.40791727864 772.40682993586 36.724 2 -0.65706669484465 0.19512383900928792 1.0 ['nc|ENSG00000163803|Q6P1J6-3|PLB1'] 68083 4677 LTPCHGAL True PC9_epitope_Rep2 810.4058091036599 810.40470993586 23.36 2 -0.6570729184338024 0.19512383900928792 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 110593 5473 TISSKSHSPSP True H1975_Epitope_Rep1 1126.5618517207402 1126.56074993586 26.112 2 -0.6570894098047432 0.19512383900928792 1.0 ['ENSG00000132122|ENST00000371847|SPATA6', 'nc|ENSG00000132122|Q9NWH7-2|SPATA6', 'ENST00000463938.5_1_1:48864995-48878812:-|nuORF'] 84179 10396 QESLVVSEV True H1975_Epitope_Rep3 988.50769088956 988.50658993586 45.045 2 -0.6571180727845845 0.1951332776075044 1.0 ['nc|ENSG00000135315|Q5TB80-2|CEP162', 'ENSG00000135315|ENST00000403245|CEP162'] 125678 12592 VMTLRSRL True NCI_RA007_Epitope_Rep2 974.56952038382 974.56842993586 53.593 2 -0.6571529833784757 0.1951332776075044 1.0 ['ENST00000557978.6_1_19:19680348-19681054:-|nuORF', 'ENST00000558222.1_1_19:19675736-19681567:-|nuORF', 'ENSG00000105717|ENST00000251203|PBX4'] 52281 6348 KNYEASMSHVD True NCI_RA007_Epitope_Rep3 1279.55030106087 1279.54920993586 31.974 2 -0.6571664652640031 0.19514271562132376 1.0 ['ENSG00000068383|ENST00000368594|INPP5A'] 66660 5734 LSSSSHGVP True PC9_epitope_Rep3 869.42429561877 869.42318993586 27.129 2 -0.6571798488743256 0.19514271562132376 1.0 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 33363 13146 GLELERSELFK True H1975_Epitope_Rep1 1319.7085159544297 1319.7074099358601 55.659 2 -0.6572658581150264 0.19516498483253886 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 19864 6273 ELVPSIMSNL True NCI_RA007_Epitope_Rep4 1101.57399662757 1101.57288993586 30.733 2 -0.6572777003894138 0.19516498483253886 1.0 ['ENSG00000111696|ENST00000392876|NT5DC3'] 41449 9697 IAVRVGATA True PC9_epitope_Rep5 856.5130510535199 856.51194993586 42.267 2 -0.657293367037192 0.19516498483253886 1.0 ['ENST00000233893.9_1_2:198364969-198365035:+|nuORF'] 120001 13972 VFATDDGF True PC9_epitope_Rep6 870.3759484440199 870.37484993586 65.602 2 -0.657294683592888 0.19516498483253886 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 13760 11878 DQLSKLKDER True NCI_RA007_Epitope_Rep2 1230.65681473474 1230.6557099358602 50.805 2 -0.6573107498281086 0.19516498483253886 1.0 ['nc|ENSG00000284862|Q9UFE4-2|CCDC39', 'nc|ENSG00000284862|Q9UFE4|CCDC39'] 56082 5660 LDLGGTNFRVM True NCI_RA007_Epitope_Rep2 1221.61759277505 1221.61594490379 26.631 3 -0.6573418015596179 0.19516498483253886 1.0 ['nc|ENSG00000106633|P35557-3|GCK', 'ENSG00000106633|ENST00000403799|GCK', 'nc|ENSG00000106633|P35557-2|GCK'] 27607 21931 FPSSFEEIEIL True PC9_epitope_Rep5 1309.64418436237 1309.6430899358602 89.399 2 -0.6573499830160546 0.19516498483253886 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 118709 3093 VECPPPRTTA True H1975_Epitope_Rep3 1069.52262976105 1069.5215299358601 16.401 2 -0.657411989640961 0.19516498483253886 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 45912 8347 ISRPFRYKRKM True PC9_epitope_Rep3 1480.8449073712798 1480.8432749037902 37.076 3 -0.6574552895978629 0.19516535896126405 1.0 ['ENSG00000169676|ENST00000304374|DRD5'] 94235 23722 RWRHRRPR True NCI_RA007_Epitope_Rep3 1218.70710845886 1218.70600993586 102.84 2 -0.6574685712011495 0.19516535896126405 1.0 ['ENST00000293780.4_1_17:4804403-4804460:-|nuORF'] 133677 20449 WKWFKHIIRFI True NCI_RA007_Epitope_Rep3 1572.9081592508398 1572.90652490379 89.093 3 -0.6574790283232845 0.19516535896126405 1.0 ['ENST00000409175.5_1_2:160599702-160602296:+|nuORF'] 115184 6357 TVARRWKPP True H1975_Epitope_Rep3 1109.6457965585698 1109.64468993586 29.445 2 -0.6574935307340456 0.19516535896126405 1.0 ['ENST00000354300.4_1_12:110971622-110971877:-|nuORF'] 83626 10969 QDWATFAVGP True PC9_epitope_Rep1 1090.5083595959 1090.5072699358602 47.081 2 -0.657499228090442 0.19516535896126405 1.0 ['ENSG00000204099|ENST00000407683|NEU4', 'nc|ENSG00000204099|Q8WWR8-2|NEU4', 'nc|ENSG00000204099|Q8WWR8-3|NEU4'] 18509 7503 EKPSLEKV True PC9_epitope_Rep6 928.5229470308799 928.52184993586 38.109 2 -0.6575137497211202 0.19517781423132874 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2'] 81666 27687 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 113.52 3 -0.6575373877319965 0.1951902691158947 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 66000 10517 LSLVARKDP True PC9_epitope_Rep3 997.5920296502098 997.59092993586 45.392 2 -0.6575660021558121 0.19519970288296373 1.0 ['CST8|p.A17S|2|0.42|ENSG00000125815|chr20:23491716-23491716|G/T|missense_variant'] 11132 5622 DEELRRMQEML True NCI_RA007_Epitope_Rep1 1448.67518430416 1448.6735249037902 25.931 3 -0.6575901539525375 0.19519970288296373 1.0 ['ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000426861.5_1_17:56597789-56598283:-|nuORF', 'ENSG00000180096|ENST00000321367|SEPTIN1', 'ENSG00000184702|ENST00000455784|SEPTIN5', 'ENST00000470814.1_1_22:19709577-19710004:+|nuORF'] 78894 10999 PEVLKSKL True PC9_epitope_Rep1 912.56441792004 912.56332993586 47.196 2 -0.6576337241701844 0.19520611537509283 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 45692 8065 ISLFSFSLY True H1975_Epitope_Rep1 1075.55899818643 1075.5579099358602 35.965 2 -0.6576454878320247 0.19520611537509283 1.0 ['ENST00000330137.11_1_17:57188831-57189044:-|nuORF'] 59420 11573 LGLTDHAEL True PC9_epitope_Rep6 967.49746055903 967.49636993586 55.624 2 -0.6576561065288413 0.19520611537509283 1.0 ['OR5J2|p.L163Ffs*8|1|0.3|ENSG00000174957|chr11:56177103-56177104|-/T|frameshift_variant', 'ENSG00000174957|ENST00000312298|OR5J2'] 67833 14401 LTIIGHGL True PC9_epitope_Rep2 822.4963383602201 822.49524993586 60.657 2 -0.6577291283788891 0.19522195918241037 1.0 ['ENSG00000064989|ENST00000392370|CALCRL'] 124890 17220 VLLPCFII True PC9_epitope_Rep2 916.54559705176 916.54448993586 71.496 2 -0.6577444000763734 0.19522195918241037 1.0 ['nc|ENSG00000063127|Q9GZN6-2|SLC6A16', 'ENSG00000063127|ENST00000335875|SLC6A16'] 98803 16581 SITEEFYRYML True PC9_epitope_Rep5 1450.6802526012598 1450.67914993586 68.785 2 -0.6577758708428999 0.19522195918241037 1.0 ['nc|ENSG00000153820|Q2M3C7-2|SPHKAP', 'ENSG00000153820|ENST00000392056|SPHKAP'] 83611 7231 QDVEKELRDGG True NCI_RA007_Epitope_Rep5 1244.5996937814398 1244.5985899358602 34.492 2 -0.6577818215921513 0.19522195918241037 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant'] 12160 6533 DIKHQLMKEVR True NCI_RA007_Epitope_Rep2 1395.76565399107 1395.76399490379 30.023 3 -0.6577833028801713 0.19522195918241037 1.0 ['ENSG00000165359|ENST00000639893|INTS6L', 'nc|ENSG00000165359|Q5JSJ4|INTS6L', 'ENST00000481429.1_1_X:134713888-134715555:+|nuORF', 'ENST00000494957.5_1_X:134713813-134716222:+|nuORF', 'nc|ENSG00000165359|Q5JSJ4-4|INTS6L'] 55191 15603 LAPGSLLGAA True PC9_epitope_Rep4 868.5018176634799 868.50072993586 67.941 2 -0.6578337376692379 0.19523139050919838 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'SALL3|p.F649Lfs*5|1|0.44|ENSG00000256463|chr18:78993938-78993938|C/-|frameshift_variant', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3'] 24982 6063 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 29.937 2 -0.657856680891118 0.19523139050919838 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 100608 10725 SLQKIWDYV True NCI_RA007_Epitope_Rep5 1150.60225998074 1150.60116993586 47.893 2 -0.6578836347407638 0.19524384205966086 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|144|3|sense'] 105646 14763 SVFLDQMKKF True PC9_epitope_Rep4 1241.64783027417 1241.64619490379 64.72 3 -0.6579351218122558 0.19530270914238856 1.0 ['ENSG00000136261|ENST00000258761|BZW2'] 13756 10174 DQLQIYANGKN True NCI_RA007_Epitope_Rep2 1262.6255146064598 1262.62440993586 44.163 2 -0.6580118879979926 0.1953060940328295 1.0 ['nc|ENSG00000159403|P00736|C1R', 'ENSG00000159403|ENST00000647956|C1R'] 114700 7647 TSSNQQKNFK True H1975_Epitope_Rep3 1180.58364979448 1180.58254993586 34.396 2 -0.6580220101297162 0.1953060940328295 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant'] 133381 6555 WFMKYQHVDPE True H1975_Epitope_Rep3 1478.66527124346 1478.66362490379 30.176 3 -0.6580432133436697 0.1953060940328295 1.0 ['ENSG00000161048|ENST00000465647|NAPEPLD', 'ENST00000414118.2_1_7:102743878-102755668:-|nuORF'] 63190 17103 LNVDGLLVY True H1975_Epitope_Rep3 1004.55424715916 1004.5536749679301 71.407 1 -0.6580449664750339 0.1953060940328295 1.0 ['ENSG00000104884|ENST00000391945|ERCC2'] 24979 4082 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 21.979 2 -0.6580580912749557 0.19532494856205815 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 90366 24013 RIKAITTC True NCI_RA007_Epitope_Rep3 904.5164221818001 904.51587496793 104.02 1 -0.6580706048810513 0.19532494856205815 1.0 ['ENSG00000187105|ENST00000553558|HEATR4'] 68569 12885 LTWTWLCQRRP True NCI_RA007_Epitope_Rep2 1458.7554236605397 1458.7543299358601 54.74 2 -0.6580734171108708 0.19532494856205815 1.0 ['ENST00000330175.8_2_17:48195058-48202283:-|nuORF', 'ENST00000507043.1_1_17:48195460-48202292:-|nuORF'] 19884 9325 ELVVNYDAP True PC9_epitope_Rep3 1018.4971262058599 1018.49602993586 40.81 2 -0.6581077828350358 0.19532494856205815 1.0 ['ENSG00000185163|ENST00000397333|DDX51'] 33216 18110 GLADLPSSPAP True PC9_epitope_Rep3 1023.52367530687 1023.5225699358599 74.857 2 -0.6581216467381729 0.19533437495165756 1.0 ['ENST00000409871.5_1_2:113033381-113033582:+|nuORF'] 133411 10349 WFTMSFSYY True H1975_Epitope_Rep3 1230.50558271458 1230.5044899358602 44.861 2 -0.6581242277856026 0.19533437495165756 1.0 ['SV2A|p.E490Sfs*3|1|0.38|ENSG00000159164|chr1:149908118-149908118|C/-|frameshift_variant', 'nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 101479 19632 SNRLRLALVR True NCI_RA007_Epitope_Rep2 1196.7465732289998 1196.74546993586 81.314 2 -0.6581390649955068 0.19533473580002475 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 792 6616 ACDCRHAP True H1975_Epitope_Rep2 871.34289157727 871.34178993586 30.356 2 -0.6581537398486856 0.19533473580002475 1.0 ['SVA_F_dup842|chr17:42972299-42974012:+|2.756514949480428|0.1714938602276479|4.01|487.0|19|2|sense', 'SVA_F_dup683|chr12:56075092-56076774:-|1.8546114936796516|0.0829394271016015|4.48|483.0|13|2|sense', 'SVA_F_dup4|chr1:21023240-21024912:+|1.5065420807830687|0.2036143221834308|2.89|484.0|31|3|sense', 'SVA_F_dup394|chr7:73283288-73285309:-|1.385153198310789|0.0859803918566289|4.01|468.0|32|3|sense', 'chr12:121993709-121999716|333|25.9|0.37|6.13|+|0|TE_info:SVA_F,SVA_F_dup702,SVA,Retroposon,donor,+,121993006,121993709|None,CFAP251|2'] 81667 27750 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 113.87 3 -0.6581909866454971 0.19533473580002475 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 63088 13097 LNMERNNRYQP True PC9_epitope_Rep2 1433.68338091909 1433.6822899358601 55.655 2 -0.6582832271836928 0.19533473580002475 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|11|1|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|7|1|sense'] 113152 6487 TQDAESIHY True H1975_Epitope_Rep3 1062.4618033263 1062.46127496793 29.921 1 -0.6582849315766196 0.19533473580002475 1.0 ['ENST00000498831.1_1_3:183854405-183855259:+|nuORF'] 62422 8625 LLSCVCHTL True PC9_epitope_Rep1 987.4881588286299 987.48706993586 38.014 2 -0.6582951741333382 0.1953471824776872 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 62378 17691 LLRQSSFTL True PC9_epitope_Rep5 1063.60259433391 1063.6014899358602 73.063 2 -0.6583128440656727 0.19535358534925448 1.0 ['ENST00000478701.1_1_2:210642002-210650886:+|nuORF'] 3750 9625 AGTESSRRAQ True H1975_Epitope_Rep2 1061.52138389109 1061.52028993586 41.999 2 -0.6583275391553819 0.19535358534925448 1.0 ['nc|ENSG00000074660|Q14162-2|SCARF1', 'ENSG00000074660|ENST00000263071|SCARF1', 'SCARF1|p.E792K|1|0.27|ENSG00000074660|chr17:1634877-1634877|C/T|missense_variant', 'ENST00000576012.5_1_17:1538054-1543444:-|nuORF'] 61395 10276 LLENRTEKRKR True NCI_RA007_Epitope_Rep2 1441.8477438222496 1441.8460949037901 44.561 3 -0.6583326454411537 0.19535358534925448 1.0 ['nc|ENSG00000135913|Q86T82-2|USP37', 'ENSG00000135913|ENST00000258399|USP37', 'USP37|p.E875Nfs*2|1|0.27|ENSG00000135913|chr2:218459810-218459810|C/-|frameshift_variant', 'ENST00000478329.1_1_2:219394729-219411793:-|nuORF'] 58489 16472 LEYQRIEK True PC9_epitope_Rep4 1077.5818588893299 1077.5807699358602 71.332 2 -0.6583533924079781 0.19535998762663367 1.0 ['ENSG00000163617|ENST00000295878|CCDC191', 'nc|ENSG00000163617|Q8NCU4-2|CCDC191', 'ENST00000460813.5_1_3:113723412-113755878:-|nuORF'] 59743 19921 LGVPGVLLPDP True PC9_epitope_Rep5 1075.62774645259 1075.62664993586 81.681 2 -0.658353582878706 0.19535998762663367 1.0 ['ENST00000541078.6_1_17:79828535-79828592:-|nuORF'] 56604 13456 LDYAWVEP True PC9_epitope_Rep1 991.46509780159 991.46400993586 56.616 2 -0.6583768093819908 0.19535998762663367 1.0 ['VPS13D|p.D3554V|1|0.77|ENSG00000048707|chr1:12369555-12369555|A/T|missense_variant'] 11371 17632 DFGLDVYLT True H1975_Epitope_Rep1 1041.5018772331298 1041.50137496793 73.364 1 -0.6584112041201027 0.1953724325661965 1.0 ['nc|ENSG00000172940|Q9Y226-2|SLC22A13', 'ENSG00000172940|ENST00000311856|SLC22A13'] 10546 10669 CPRPGGCL True PC9_epitope_Rep2 801.3625643926899 801.36146993586 46.351 2 -0.6584821484956709 0.1953758119393752 1.0 ['ENST00000519604.5_1_20:61920746-61920884:+|nuORF'] 98914 14272 SIYAREPVL True PC9_epitope_Rep4 1046.5760452328998 1046.57494993586 62.8 2 -0.6584851178069996 0.1953758119393752 1.0 ['ENST00000378535.4_1_12:88890181-88890376:-|nuORF'] 55689 7484 LDCIPECP True NCI_RA007_Epitope_Rep4 888.37212601688 888.37102993586 35.432 2 -0.6584896053811036 0.1953758119393752 1.0 ['ENSG00000102104|ENST00000379984|RS1'] 128665 8958 VSLSFHVSL True PC9_epitope_Rep6 987.53893144819 987.53782993586 44.452 2 -0.6585281764913604 0.1953758119393752 1.0 ['SVA_F_dup4|chr1:21023240-21024912:+|1.5065420807830687|0.2036143221834308|2.89|484.0|13|2|sense'] 90715 22508 RKNRRRRLGFN True PC9_epitope_Rep6 1471.8708793086696 1471.86922490379 99.58 3 -0.6585401378786025 0.19538523398595775 1.0 ['ENST00000398645.6_1_11:66887311-66947572:+|nuORF'] 43645 11119 IILKRKRGRPP True NCI_RA007_Epitope_Rep1 1332.8830071321597 1332.88135490379 47.251 3 -0.6586043993629651 0.19538523398595775 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 80525 12466 PLLPMEQLIVP True H1975_Epitope_Rep1 1248.715181558 1248.71408993586 52.988 2 -0.6586380436644761 0.19539767718788179 1.0 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD'] 59115 19952 LGEIGGIIGT True PC9_epitope_Rep4 928.5229470308799 928.52184993586 84.88 2 -0.658701449527732 0.1953980330302468 1.0 ['ENSG00000168280|ENST00000435030|KIF5C', 'nc|ENSG00000168280|O60282-2|KIF5C', 'ENST00000460377.1_2:149835462-149853923:+|nuORF'] 125202 14455 VLQLGNIVFK True H1975_Epitope_Rep3 1129.68593003505 1129.68482993586 60.959 2 -0.6587129483886864 0.1953980330302468 1.0 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 134682 8498 WWPSEDGDY True H1975_Epitope_Rep1 1153.4352542252898 1153.4341499358602 37.617 2 -0.6587240976684158 0.1953980330302468 1.0 ['ENSG00000198722|ENST00000635942|UNC13B'] 60322 21223 LIFRYIQP True PC9_epitope_Rep2 1048.6069514383598 1048.60584993586 87.092 2 -0.6587371033436489 0.1953980330302468 1.0 ['OR5J2|p.S258R|1|0.14|ENSG00000174957|chr11:56177391-56177391|C/A|missense_variant'] 24703 12440 FAVFHPHFVL True PC9_epitope_Rep6 1212.64439957624 1212.64276490379 59.278 3 -0.6587665333473725 0.1953980330302468 1.0 ['ENSG00000147262|ENST00000682440|GPR119'] 63322 16089 LPDLGPIG True PC9_epitope_Rep4 780.43815477776 780.43760496793 69.822 1 -0.6587909629265808 0.19540443166179586 1.0 ['ENSG00000113924|ENST00000283871|HGD', 'HGD|p.L301Ffs*4|1|0.17|ENSG00000113924|chr3:120638558-120638559|-/A|frameshift_variant'] 32129 10397 GEYVGSPSAP True H1975_Epitope_Rep2 962.4345259492999 962.43342993586 45.004 2 -0.6588116982482657 0.19540443166179586 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'ENST00000473037.5_1_1:235826242-235897989:-|nuORF'] 65558 12900 LSGEQMLTI True H1975_Epitope_Rep2 990.5055827145799 990.50448993586 54.732 2 -0.658836220721164 0.19540443166179586 1.0 ['nc|ENSG00000186487|Q9UL68-4|MYT1L', 'ENSG00000186487|ENST00000647738|MYT1L', 'nc|ENSG00000186487|Q9UL68-3|MYT1L'] 13091 6404 DLSCPAPSP True NCI_RA007_Epitope_Rep5 885.3902186091699 885.38912993586 31.305 2 -0.6588672229979066 0.1954078082721299 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant', 'KMT2D|p.A3440Vfs*11|1|0.21|ENSG00000167548|chr12:49034848-49034848|G/-|frameshift_variant', 'KMT2D|p.Q3370Pfs*53|2|0.24|ENSG00000167548|chr12:49037247-49037248|-/G|frameshift_variant', 'KMT2D|p.V3089Wfs*30|1|0.39|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant', 'KMT2D|p.R3082Gfs*14|1|0.2|ENSG00000167548|chr12:49038108-49038112|TCCCG/-|frameshift_variant', 'KMT2D|p.R2687Qfs*4|1|0.4|ENSG00000167548|chr12:49039604-49039604|C/-|frameshift_variant', 'KMT2D|p.S2590Wfs*56|1|0.29|ENSG00000167548|chr12:49039976-49040001|GCTGCTGGGCCCCAGGGGGCTGCCCG/-|frameshift_variant', 'KMT2D|p.G2178Wfs*24|1|0.33|ENSG00000167548|chr12:49041238-49041239|-/A|frameshift_variant', 'KMT2D|p.P2302Qfs*20|2|0.26|ENSG00000167548|chr12:49040865-49040865|G/-|frameshift_variant', 'KMT2D|p.P2276Hfs*10|1|0.1|ENSG00000167548|chr12:49040943-49040943|G/-|frameshift_variant', 'KMT2D|p.Y2199Ifs*65|1|0.16|ENSG00000167548|chr12:49041176-49041176|G/-|frameshift_variant', 'KMT2D|p.A1770Cfs*18|1|0.32|ENSG00000167548|chr12:49043883-49043884|-/A|frameshift_variant', 'KMT2D|p.A1390Gfs*42|1|0.26|ENSG00000167548|chr12:49048032-49048033|-/C|frameshift_variant', 'KMT2D|p.K1350Rfs*5|1|0.25|ENSG00000167548|chr12:49048734-49048741|CTCCTCCT/-|frameshift_variant', 'KMT2D|p.G1235Vfs*95|1|0.3|ENSG00000167548|chr12:49049884-49049884|C/-|frameshift_variant', 'KMT2D|p.E1171Nfs*41|1|0.27|ENSG00000167548|chr12:49050078-49050078|G/-|frameshift_variant', 'KMT2D|p.D1156Pfs*27|1|0.43|ENSG00000167548|chr12:49050122-49050123|CC/-|frameshift_variant', 'KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant'] 15471 6832 EAPSLRPAPP True H1975_Epitope_Rep1 1033.55564414149 1033.5545499358602 31.323 2 -0.658952493353121 0.1954078082721299 1.0 ['ENSG00000171564|ENST00000302068|FGB'] 46338 9830 ITFVGKQP True NCI_RA007_Epitope_Rep5 888.5069030439199 888.50580993586 44.456 2 -0.6590390740179296 0.1954078082721299 1.0 ['ENST00000482587.5_3_1:179833497-179833611:-|nuORF'] 108099 8221 TDLNRDVTL True PC9_epitope_Rep6 1045.54038800017 1045.53928993586 41.201 2 -0.6590620169050171 0.1954078082721299 1.0 ['nc|ENSG00000073712|Q96AC1-2|FERMT2', 'ENSG00000073712|ENST00000341590|FERMT2', 'nc|ENSG00000073712|Q96AC1-3|FERMT2'] 78148 6370 PAPLRAAPAA True PC9_epitope_Rep2 933.5396001545298 933.53850993586 29.906 2 -0.659126866828219 0.19546058938124247 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 43067 8209 IGHDACSYFTS True PC9_epitope_Rep3 1199.4917235555902 1199.4900749037902 36.556 3 -0.6591329700729188 0.19546058938124247 1.0 ['PIK3C2G|p.D929G|1|0.47|ENSG00000139144|chr12:18491551-18491551|A/G|missense_variant'] 121800 11616 VGNALLNVVL True NCI_RA007_Epitope_Rep3 1010.61243074162 1010.61132993586 52.814 2 -0.6591363784100611 0.19546058938124247 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 4872 12049 ALGALPALTF True NCI_RA007_Epitope_Rep4 972.56441792004 972.56332993586 53.347 2 -0.6593011549181084 0.19559671609023022 1.0 ['nc|ENSG00000177595|Q9HB75-3|PIDD1', 'nc|ENSG00000177595|Q9HB75-2|PIDD1', 'ENSG00000177595|ENST00000347755|PIDD1', 'ENST00000524486.5_1_11:803168-803522:-|nuORF'] 30453 9021 GAGEERVTSQF True NCI_RA007_Epitope_Rep2 1179.5520153130299 1179.55090993586 39.691 2 -0.6593607200993793 0.19564007421150278 1.0 ['ENST00000529313.5_1_11:17298611-17304373:+|nuORF'] 78543 10875 PDLVNVIK True H1975_Epitope_Rep3 896.53311779176 896.53202993586 46.913 2 -0.6594563402599671 0.19566494542531152 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000493342.1_1_X:24745055-24752029:+|nuORF'] 81668 27875 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 114.55 3 -0.6594608359631553 0.19566494542531152 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 72441 12047 MTLQGHTSAV True PC9_epitope_Rep4 1043.50697969691 1043.50588993586 54.145 2 -0.6595249766092888 0.19569284046812918 1.0 ['PLAA|p.A152S|1|0.25|ENSG00000137055|chr9:26928211-26928211|C/A|missense_variant'] 62089 11291 LLNGVSIK True PC9_epitope_Rep6 842.52255310806 842.52144993586 54.445 2 -0.6595905561201215 0.19575165419578258 1.0 ['ENST00000575209.5_1_17:5386088-5389490:-|nuORF'] 126724 14942 VPRRVGGG True H1975_Epitope_Rep2 796.4667695674398 796.46566993586 62.626 2 -0.6596003117097851 0.19577349390140214 1.0 ['ADCY9-PRKCB|2|fusion', 'ADCY9-PRKCB|1|fusion', 'ADCY9|p.S373Lfs*8|1|0.14|ENSG00000162104|chr16:4114326-4114326|A/-|frameshift_variant', 'ENSG00000162104|ENST00000294016|ADCY9'] 106226 3823 SVPPAAEPVP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 19.804 2 -0.6596173488382127 0.19577349390140214 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 121453 5553 VGILRRILRTL True NCI_RA007_Epitope_Rep1 1308.8717737421198 1308.8706699358602 25.67 2 -0.6596200561378419 0.19577349390140214 1.0 ['ENSG00000156381|ENST00000286918|ANKRD9'] 129399 7016 VTEHQASL True PC9_epitope_Rep4 883.43994568291 883.43884993586 34.234 2 -0.6596408620963407 0.19578592629235717 1.0 ['ENST00000261402.6_1_12:106532525-106533446:-|nuORF'] 35927 9664 GVAPFTIAR True NCI_RA007_Epitope_Rep4 930.5287011176599 930.52760993586 44.022 2 -0.6597329892829734 0.1958232211590484 1.0 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 129448 9970 VTELLARYK True H1975_Epitope_Rep1 1091.63389446219 1091.63278993586 43.286 2 -0.6597664802950531 0.1958232211590484 1.0 ['ENST00000586817.5_1_19:1089487-1094188:-|nuORF', 'ENSG00000099817|ENST00000615234|POLR2E'] 113244 9374 TQEAIQGMLCM True H1975_Epitope_Rep1 1223.5348513208698 1223.5337499358602 40.966 2 -0.6597908887421627 0.1958232211590484 1.0 ['nc|ENSG00000172943|Q9UPP1-4|PHF8', 'nc|ENSG00000172943|Q9UPP1-3|PHF8', 'ENSG00000172943|ENST00000338154|PHF8', 'nc|ENSG00000172943|Q9UPP1|PHF8', 'nc|ENSG00000172943|Q9UPP1-5|PHF8'] 44647 22696 IPKTWYSAEQF True PC9_epitope_Rep1 1368.67140216972 1368.6703099358601 92.105 2 -0.6598193914785816 0.1958356520126136 1.0 ['ENSG00000116031|ENST00000410009|CD207'] 103589 9994 SRDIRWEWKWP True NCI_RA007_Epitope_Rep1 1557.7840809365296 1557.78244490379 42.88 3 -0.6598738437159232 0.19584505518286086 1.0 ['ENST00000535164.5_1_16:19612936-19627472:+|nuORF'] 43981 19882 ILGPPPPSF True PC9_epitope_Rep2 923.51165407119 923.51054993586 81.869 2 -0.6598889336796344 0.19584505518286086 1.0 ['ENSG00000015479|ENST00000394805|MATR3', 'nc|ENSG00000280987|P43243-2|MATR3', 'ENST00000502422.5_1_5:138651717-138665081:+|nuORF', 'ENST00000511978.5_1_5:138651425-138655027:+|nuORF', 'ENST00000509918.5_1_5:138651425-138657594:+|nuORF'] 12102 14004 DIFTTIGSV True PC9_epitope_Rep4 951.49131254943 951.49020993586 61.775 2 -0.6599420321737534 0.19586991467787807 1.0 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-5|CRB1', 'ENST00000484075.5_1_1:197411604-197447006:+|nuORF'] 103826 4802 SRHRQIVVDKY True NCI_RA007_Epitope_Rep2 1399.7684308723897 1399.76677490379 23.306 3 -0.659968231112009 0.19586991467787807 1.0 ['ENSG00000039537|ENST00000337836|C6'] 108841 5091 TEQYIQTMTWL True NCI_RA007_Epitope_Rep2 1412.66460253712 1412.66296490379 24.427 3 -0.6600096965167367 0.1958978005162527 1.0 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 14165 4502 DSNARVAPFRI True NCI_RA007_Epitope_Rep1 1244.6625688215197 1244.66092490379 21.616 3 -0.660079888472742 0.195922657228087 1.0 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'TBC1D8|p.Q225Rfs*11|2|0.43|ENSG00000204634|chr2:101050556-101050556|C/-|frameshift_variant'] 101992 9108 SPNRQWDE True PC9_epitope_Rep5 1030.4468219684998 1030.44572993586 39.979 2 -0.6600947934888731 0.195922657228087 1.0 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ', 'HELZ|p.T789Yfs*7|1|0.19|ENSG00000198265|chr17:67149977-67149978|-/A|frameshift_variant'] 46855 10626 IVGAPEPR True H1975_Epitope_Rep3 837.4708518883699 837.47030496793 45.944 1 -0.6601122078648435 0.19593508500772797 1.0 ['NACC1|p.K42Sfs*115|1|0.3|ENSG00000160877|chr19:13135332-13135333|AG/-|frameshift_variant'] 20203 8268 ENTGVDVF True NCI_RA007_Epitope_Rep5 879.3974121645899 879.39686496793 38.481 1 -0.6601453272905117 0.19596296811486685 1.0 ['ENSG00000168421|ENST00000381799|RHOH', 'RHOH|p.M47T|1|0.18|ENSG00000168421|chr4:40243526-40243526|T/C|missense_variant'] 133450 18171 WGKKMKGKI True NCI_RA007_Epitope_Rep5 1074.6372060208198 1074.63610993586 76.7 2 -0.6602300077246205 0.19598479228486648 1.0 ['ENST00000380693.7_1_X:11777712-11777841:+|nuORF'] 55091 12680 LALMTVEL True PC9_epitope_Rep1 888.4990407821599 888.49794993586 53.645 2 -0.6602472365492119 0.19598479228486648 1.0 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1', 'ENST00000375290.6_3_9:98215758-98232201:-|nuORF'] 9370 8300 AVVCREKP True PC9_epitope_Rep3 900.4851220535198 900.48402993586 36.899 2 -0.6602560935916388 0.19598479228486648 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'ENSG00000162849|ENST00000407071|KIF26B'] 70776 12702 MEEFQRYCWNP True H1975_Epitope_Rep2 1501.6118557716097 1501.6107499358602 53.958 2 -0.6603717476988834 0.1960869162056069 1.0 ['ENSG00000186009|ENST00000335288|ATP4B'] 126886 11563 VPTRMRDIMST True PC9_epitope_Rep4 1305.6533266607698 1305.65222993586 52.237 2 -0.6603998150117999 0.1960869162056069 1.0 ['SLC22A8|p.A208D|1|0.35|ENSG00000149452|chr11:62999059-62999059|G/T|missense_variant'] 100873 12012 SLSGHNYL True H1975_Epitope_Rep2 889.42938099921 889.42828993586 51.284 2 -0.6604650907451558 0.1961241867437296 1.0 ['ENSG00000256797|ENST00000535540|KLRF2'] 43674 9564 IINETVPN True PC9_epitope_Rep5 898.47599683846 898.47544496793 41.746 1 -0.6604695221321331 0.1961241867437296 1.0 ['nc|ENSG00000237702|A0A576|TRBV3-1'] 117582 18749 VAGPAPVAAL True PC9_epitope_Rep3 864.5069030439199 864.50580993586 77.339 2 -0.6604702744289301 0.1961241867437296 1.0 ['ENST00000441394.1_1_13:30880936-30881176:-|nuORF'] 81750 13925 PSDIDVPKP True H1975_Epitope_Rep2 966.5022115863 966.50110993586 58.71 2 -0.6605506201370328 0.19614600074174807 1.0 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 25051 6432 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 33.367 2 -0.6605552934740495 0.19614600074174807 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 102116 3986 SPQQAEVSPDA True H1975_Epitope_Rep3 1127.50948179471 1127.5083899358601 20.458 2 -0.6605916459357478 0.19614600074174807 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 84140 8353 QEQSIPTFP True PC9_epitope_Rep2 1045.50802524273 1045.5069299358602 37.502 2 -0.6606237490171056 0.1961584225735169 1.0 ['AGO1|p.K333Sfs*7|1|0.21|ENSG00000092847|chr1:35895244-35895244|A/-|frameshift_variant'] 133451 18261 WGKKMKGKI True NCI_RA007_Epitope_Rep5 1074.6372060208198 1074.63610993586 77.047 2 -0.6606724330984913 0.1961708440213864 1.0 ['ENST00000380693.7_1_X:11777712-11777841:+|nuORF'] 40524 7092 HSLMAMSL True PC9_epitope_Rep4 888.4197449156401 888.41864993586 34.547 2 -0.6607123127112033 0.19618023363619508 1.0 ['ENSG00000101298|ENST00000381867|SNPH'] 41957 13005 IECKPDHLLWR True PC9_epitope_Rep3 1408.7285402063599 1408.72690490379 55.052 3 -0.6607257708932532 0.19618023363619508 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2'] 40668 9041 HTLFGDELC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 1218.5703085088896 1218.56920993586 39.769 2 -0.6607532648713685 0.19619265417123785 1.0 ['CON__P02769'] 5341 7070 ALSSGSIAAI True H1975_Epitope_Rep3 888.4916469026 888.49054993586 32.162 2 -0.6608422577054553 0.19623597762600822 1.0 ['ENSG00000169116|ENST00000307428|PARM1'] 9052 18336 AVIRPIIAT True PC9_epitope_Rep3 952.6069514383599 952.60584993586 75.739 2 -0.660870528575764 0.19624839691589796 1.0 ['RBM42|p.P81A|1|0.08|ENSG00000126254|chr19:35629632-35629632|C/G|missense_variant'] 87588 11546 QTQIEEERKK True NCI_RA007_Epitope_Rep2 1287.6782784553095 1287.67718993586 49.503 2 -0.6609022309105258 0.19627323434433955 1.0 ['nc|ENSG00000077935|Q8NDV3-2|SMC1B', 'ENSG00000077935|ENST00000357450|SMC1B'] 80461 21295 PLKYLDTP True PC9_epitope_Rep2 945.5171333744499 945.51658496793 87.374 1 -0.6609274751304292 0.19627323434433955 1.0 ['TET3|p.G1454Afs*77|1|0.36|ENSG00000187605|chr2:74101148-74101148|G/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3', 'ENST00000475405.2_1_2:74274397-74300767:+|nuORF'] 82710 21904 PVPLGCRRCL True PC9_epitope_Rep5 1112.5946895858401 1112.59358993586 89.293 2 -0.6610716876171484 0.19632290459636925 1.0 ['ENST00000445698.1_3_3:45883482-45883542:-|nuORF'] 135155 13722 YAQYGEDDEE True PC9_epitope_Rep1 1217.4360420709297 1217.43494993586 57.63 2 -0.6610937651106056 0.19632290459636925 1.0 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 56657 7167 LEAAGDKF True PC9_epitope_Rep3 849.42323298961 849.42212993586 32.58 2 -0.6611120674034293 0.19632290459636925 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 136854 4729 YIVTEYMSK True NCI_RA007_Epitope_Rep2 1132.5474475265598 1132.54634993586 23.023 2 -0.6611536619039531 0.19632290459636925 1.0 ['ENSG00000197122|ENST00000373578|SRC', 'nc|ENSG00000197122|P12931-2|SRC', 'nc|ENSG00000197122|P12931-3|SRC', 'ENST00000467556.1_1_20:36028555-36030207:+|nuORF', 'ENST00000477066.5_1_20:36025122-36031779:+|nuORF'] 67844 19479 LTITDTQLV True PC9_epitope_Rep4 1002.5597264624199 1002.55862993586 83.043 2 -0.6612192786274544 0.19635077094212527 1.0 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12', 'ENST00000479481.5_1_10:99131673-99132940:-|nuORF'] 20783 6218 EQLWVDQQK True H1975_Epitope_Rep3 1172.5825871653199 1172.5814899358602 28.93 2 -0.661242095737851 0.19635711968360395 1.0 ['nc|ENSG00000132436|Q6PIW4-2|FIGNL1', 'ENSG00000132436|ENST00000433017|FIGNL1'] 125008 6407 VLNVDPDNVT True NCI_RA007_Epitope_Rep4 1084.540053647 1084.53894993586 31.246 2 -0.6612930869444636 0.19635711968360395 1.0 ['ENSG00000130222|ENST00000252506|GADD45G'] 137444 6878 YLNIQRRTRL True NCI_RA007_Epitope_Rep4 1331.7786016332698 1331.77696490379 33.073 3 -0.6612940812157092 0.19635711968360395 1.0 ['nc|ENSG00000101180|Q9Y5N1-3|HRH3', 'nc|ENSG00000101180|Q9Y5N1-7|HRH3', 'nc|ENSG00000101180|Q9Y5N1-4|HRH3', 'ENSG00000101180|ENST00000340177|HRH3', 'nc|ENSG00000101180|Q9Y5N1-2|HRH3'] 30836 8637 GAQALQLFESH True H1975_Epitope_Rep1 1199.59348620219 1199.5923899358602 38.151 2 -0.6613345138905322 0.19638498377877336 1.0 ['ENSG00000126088|ENST00000246337|UROD'] 98818 12825 SITRMKRIFY True NCI_RA007_Epitope_Rep1 1313.7278119303699 1313.72670993586 53.875 2 -0.6613948326789382 0.19640981276648334 1.0 ['ENSG00000111536|ENST00000229134|IL26'] 82852 19263 PVTLRRRPLP True PC9_epitope_Rep1 1203.7564096367098 1203.75475490379 78.897 3 -0.6613971699976864 0.19640981276648334 1.0 ['chr11:119678765-119680483|191|11.76|0.29|5.36|-|1|NECTIN1,None|1'] 57657 15809 LEMAPLSLAP True H1975_Epitope_Rep2 1040.55761828744 1040.55652993586 65.997 2 -0.6614424975237871 0.19641919238730807 1.0 ['ENST00000253727.9_2_19:50880073-50881037:+|nuORF', 'ENST00000597130.5_3_19:50879767-50881034:+|nuORF'] 102291 21316 SPVDLYILM True PC9_epitope_Rep5 1049.54671925057 1049.54562993586 87.046 2 -0.6614459316074374 0.19641919238730807 1.0 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 61993 21493 LLLQLNNQRTK True PC9_epitope_Rep1 1339.79358299107 1339.7924899358602 87.516 2 -0.6615122038586093 0.19643794989032717 1.0 ['ENSG00000177374|ENST00000619757|HIC1', 'nc|ENSG00000177374|Q14526|HIC1'] 128977 8458 VSVTPKTVT True NCI_RA007_Epitope_Rep5 930.53859709502 930.53750993586 39.215 2 -0.6615138840974247 0.19643794989032717 1.0 ['nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2'] 136819 9037 YITHNRNVI True PC9_epitope_Rep6 1128.6039913162401 1128.60235490379 44.805 3 -0.6615263712449873 0.19643794989032717 1.0 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000553730.5_1_14:102276279-102348623:+|nuORF'] 72771 8599 NAEVVAGTGEQ True PC9_epitope_Rep2 1073.4989171110099 1073.4978299358602 38.437 2 -0.6615676606261051 0.19643794989032717 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 11512 24409 DGGWCWGC True PC9_epitope_Rep1 882.2788943383799 882.27778993586 98.731 2 -0.6616010717609557 0.19645036222369824 1.0 ['ENST00000593460.1_1_19:18120319-18120565:+|nuORF'] 1612 8642 AEFSLHCETNL True PC9_epitope_Rep5 1262.5601374685798 1262.55904993586 38.184 2 -0.6616279648577018 0.19647822057460612 1.0 ['ENSG00000139318|ENST00000279488|DUSP6'] 93942 25220 RVLKIPRAV True PC9_epitope_Rep1 1050.7025831587 1050.70148993586 101.89 2 -0.6616804865258274 0.19650607806490478 1.0 ['ENSG00000102010|ENST00000348343|BMX'] 99262 4737 SLDDIQQAINR True NCI_RA007_Epitope_Rep2 1271.64697832703 1271.64532490379 23.056 3 -0.6617011711926708 0.19651848877081338 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.N1473Ifs*15|1|0.19|ENSG00000124721|chr6:38848664-38848664|A/-|frameshift_variant', 'DNAH8|p.S2130Vfs*12|1|0.21|ENSG00000124721|chr6:38872578-38872578|G/-|frameshift_variant'] 140943 4800 YYYYHRQYRRV True NCI_RA007_Epitope_Rep2 1665.81644369397 1665.81478490379 23.3 3 -0.6617590280088037 0.1965463447785861 1.0 ['nc|ENSG00000140990|O96000-2|NDUFB10', 'ENSG00000140990|ENST00000268668|NDUFB10', 'ENST00000565031.1_1_16:2009625-2011290:+|nuORF'] 37340 13374 GVWDMRNKQF True PC9_epitope_Rep5 1279.6131761009499 1279.61152490379 56.459 3 -0.6617872188294076 0.1965468781369203 1.0 ['ENSG00000123908|ENST00000220592|AGO2', 'nc|ENSG00000123908|Q9UKV8-2|AGO2', 'AGO2|p.G572Efs*3|1|0.35|ENSG00000123908|chr8:140547501-140547501|C/-|frameshift_variant'] 131983 11126 VYGGGAAEI True PC9_epitope_Rep4 835.4075829254699 835.40703496793 50.573 1 -0.6618150366980439 0.1965468781369203 1.0 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 119383 12803 VENSRPTLAI True PC9_epitope_Rep4 1098.6033226098998 1098.6022299358601 57.107 2 -0.6618377747764542 0.1965468781369203 1.0 ['ENST00000564835.1_1_16:67213303-67213837:-|nuORF', 'nc|ENSG00000196123|Q68EN5-2|MATCAP1', 'ENSG00000196123|ENST00000563902|MATCAP1'] 124983 10606 VLNFLKDHF True NCI_RA007_Epitope_Rep5 1131.6076797143498 1131.60604490379 47.434 3 -0.6618543428067469 0.1965468781369203 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'ENST00000561252.1_1_15:90768241-90768761:+|nuORF', 'ENST00000560993.1_1_15:90767112-90768514:+|nuORF'] 32717 15603 GHSLTQFV True PC9_epitope_Rep5 887.45011644379 887.44900993586 65.028 2 -0.6618579855616239 0.1965468781369203 1.0 ['ENSG00000198793|ENST00000361445|MTOR'] 109270 5659 TGAVVGGY True NCI_RA007_Epitope_Rep4 722.3599044570599 722.35935496793 28.373 1 -0.6618691941489288 0.1965468781369203 1.0 ['ENST00000327761.7_1_3:50374719-50374857:-|nuORF'] 54998 16110 LAKAIAAWKL True PC9_epitope_Rep1 1083.68045073179 1083.67934993586 66.784 2 -0.6619405583716669 0.1965468781369203 1.0 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.A2365Gfs*44|3|0.14|ENSG00000163554|chr1:158612859-158612860|-/A|frameshift_variant', 'ENST00000461624.1_1_1:158592769-158604434:-|nuORF'] 117304 13794 VAAEPYLYREA True NCI_RA007_Epitope_Rep5 1280.6401020414398 1280.63900993586 59.734 2 -0.6619569589785723 0.1965468781369203 1.0 ['ENSG00000175029|ENST00000309035|CTBP2', 'CTBP2|p.Y212Lfs*38|1|0.35|ENSG00000175029|chr10:124994615-124994616|-/G|frameshift_variant'] 4605 10048 ALAFWMANA True H1975_Epitope_Rep1 993.47422301665 993.47312993586 43.589 2 -0.6619677348499645 0.1965468781369203 1.0 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 138277 373 YQYHLRQHTG True NCI_RA007_Epitope_Rep1 1301.62651766597 1301.6248649037902 1.9894 3 -0.6619799426626607 0.1965468781369203 1.0 ['ENSG00000197483|ENST00000598519|ZNF628'] 34193 11928 GPGRASLTL True PC9_epitope_Rep3 870.49231560894 870.49120993586 50.902 2 -0.6620369031151362 0.1965625868618549 1.0 ['ENST00000361658.6_1_17:19770872-19771034:-|nuORF'] 381 6719 AALEAAAAA True PC9_epitope_Rep1 757.3970182417698 757.39592993586 30.648 2 -0.6620970615606384 0.1965625868618549 1.0 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598'] 51847 24639 KKLKRGRPGRK True H1975_Epitope_Rep1 1322.8735050776197 1322.87240993586 102.09 2 -0.6621110922159452 0.1965625868618549 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3', 'ENST00000572579.1_1_17:7796637-7797935:+|nuORF'] 38319 20449 HFSLPHTYS True PC9_epitope_Rep4 1087.50869394907 1087.50758993586 86.801 2 -0.6621286767994291 0.1965625868618549 1.0 ['ENST00000555997.1_1_14:69255564-69255801:-|nuORF'] 100767 9553 SLRPRKQSQ True H1975_Epitope_Rep1 1098.62578938998 1098.62468993586 41.67 2 -0.6621445577196432 0.1965625868618549 1.0 ['ENSG00000260456|ENST00000567970|C16orf95'] 112279 20290 TLYSRLRE True NCI_RA007_Epitope_Rep2 1036.5665431783598 1036.5659749679298 83.955 1 -0.6621485545165737 0.19658436404626242 1.0 ['SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 75215 10804 NPEWLFRIY True PC9_epitope_Rep4 1236.62914343492 1236.6274949037902 49.316 3 -0.6621882827070169 0.19658436404626242 1.0 ['ENSG00000144647|ENST00000344697|POMGNT2'] 74930 6505 NLSTRDASI True PC9_epitope_Rep4 975.4985231881899 975.4974299358599 32.144 2 -0.6621987681746778 0.19658436404626242 1.0 ['NETO1|p.L455F|2|0.23|ENSG00000166342|chr18:72750238-72750238|C/A|missense_variant', 'nc|ENSG00000166342|Q8TDF5-2|NETO1', 'ENSG00000166342|ENST00000327305|NETO1'] 100501 7275 SLPLDELPS True NCI_RA007_Epitope_Rep1 969.50187723313 969.50078993586 32.288 2 -0.6622320992225922 0.1966122108643958 1.0 ['nc|ENSG00000163704|Q5FWE3-2|PRRT3', 'ENSG00000163704|ENST00000412055|PRRT3'] 85460 6738 QLGSLSKYAE True PC9_epitope_Rep5 1094.5607890915799 1094.5596899358602 30.889 2 -0.6622577388883949 0.19664005682256844 1.0 ['ENSG00000158195|ENST00000618852|WASF2', 'nc|ENSG00000158195|Q9Y6W5-2|WASF2'] 68998 15024 LVGSGTTSVTP True H1975_Epitope_Rep2 1017.5342399905701 1017.53314993586 62.939 2 -0.6622871405618174 0.19668030572068246 1.0 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 29033 9791 FTLLTVSSGIT True NCI_RA007_Epitope_Rep3 1137.6281403754099 1137.62650490379 45.576 3 -0.6622973360318742 0.19668030572068246 1.0 ['ENSG00000066777|ENST00000262215|ARFGEF1'] 22463 9944 ETHEAFNI True H1975_Epitope_Rep1 959.4348603024699 959.43376993586 43.186 2 -0.6623590864249004 0.1967235895377204 1.0 ['KCNC2|p.L248M|1|0.14|ENSG00000166006|chr12:75051263-75051263|G/T|missense_variant', 'nc|ENSG00000166006|Q96PR1-4|KCNC2', 'nc|ENSG00000116396|Q03721-2|KCNC4', 'ENST00000489935.1_1_1:110754121-110766653:+|nuORF', 'nc|ENSG00000166006|Q96PR1-5|KCNC2', 'nc|ENSG00000166006|Q96PR1-3|KCNC2', 'nc|ENSG00000166006|Q96PR1-6|KCNC2', 'ENSG00000116396|ENST00000438661|KCNC4', 'nc|ENSG00000166006|Q96PR1-2|KCNC2', 'nc|ENSG00000116396|Q03721|KCNC4', 'ENSG00000166006|ENST00000549446|KCNC2'] 12855 17774 DLLEMATFLQK True H1975_Epitope_Rep1 1307.6795243252702 1307.67842993586 73.988 2 -0.6623672478392174 0.19673295454545456 1.0 ['nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'ENSG00000197748|ENST00000357060|CFAP43'] 19155 13810 ELITQLEQGK True PC9_epitope_Rep1 1157.62920300457 1157.6275649037902 57.964 3 -0.6623818365435562 0.19673295454545456 1.0 ['nc|ENSG00000125846|P52736-2|ZNF133', 'ENSG00000125846|ENST00000425686|ZNF133', 'nc|ENSG00000125846|P52736-5|ZNF133', 'ENST00000402618.6_1_20:18269192-18290832:+|nuORF'] 84515 17219 QGTWFWQI True PC9_epitope_Rep5 1064.5079656730798 1064.50686993586 71.253 2 -0.6624039452260563 0.19674535657490466 1.0 ['ENST00000527754.1_1_11:129698120-129727360:+|nuORF', 'ENSG00000151715|ENST00000281441|TMEM45B'] 35153 12195 GSCRKKAP True PC9_epitope_Rep1 845.4541562784099 845.45304993586 51.766 2 -0.6624746853326634 0.19676712159575124 1.0 ['ENST00000505276.2_1_12:3407303-3409365:-|nuORF'] 116128 17624 TVSSNIRALDL True PC9_epitope_Rep1 1187.65100107831 1187.64990993586 72.582 2 -0.662478128846314 0.19676712159575124 1.0 ['nc|ENSG00000111554|Q8TC05-4|MDM1', 'nc|ENSG00000111554|Q8TC05|MDM1', 'ENSG00000111554|ENST00000682720|MDM1', 'ENST00000536313.2_1_12:68708913-68709961:-|nuORF'] 11007 3643 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 18.439 2 -0.6625301113917224 0.19676712159575124 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 44374 5344 INCMIRVK True NCI_RA007_Epitope_Rep3 975.5357777273899 975.53468993586 28.029 2 -0.6625733937040943 0.19682936618196412 1.0 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'nc|ENSG00000105339|A2RUS2-3|DENND3'] 69825 18473 LWWWSWRWWKL True NCI_RA007_Epitope_Rep1 1731.88267277899 1731.8815699358602 75.995 2 -0.662601168981772 0.19682936618196412 1.0 ['chr12:54282611-54283827|502|64.93|0.0|22.63|+|1|HNRNPA1,HNRNPA1|1'] 140217 9304 YWKRHRNQDRE True PC9_epitope_Rep4 1586.78145516758 1586.77981490379 43.396 3 -0.6626053707153314 0.19682936618196412 1.0 ['ENSG00000091972|ENST00000315711|CD200', 'nc|ENSG00000091972|P41217-3|CD200'] 25031 7008 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 34.203 2 -0.6626137561373295 0.19682936618196412 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 47596 3331 IYNKNMHFHM True NCI_RA007_Epitope_Rep4 1333.60598254553 1333.60432490379 18.58 3 -0.6626140159241243 0.19682936618196412 1.0 ['ENST00000507877.5_2_3:17627861-17741495:-|nuORF'] 98903 8283 SIWIFYRKLFF True NCI_RA007_Epitope_Rep1 1518.8387422783396 1518.83710490379 36.218 3 -0.6626200551832176 0.19682936618196412 1.0 ['ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 15955 7195 EDTQCDNSGP True H1975_Epitope_Rep3 1064.37166799256 1064.3705699358602 32.651 2 -0.6626277195459146 0.19682936618196412 1.0 ['TOPORS|p.E925Q|1|0.06|ENSG00000197579|chr9:32541752-32541752|C/G|missense_variant'] 98694 16133 SIQSAPPEPA True PC9_epitope_Rep6 995.4923751785899 995.49126993586 74.399 2 -0.6626408408233805 0.19682936618196412 1.0 ['nc|ENSG00000153113|P20810-3|CAST', 'nc|ENSG00000153113|P20810-4|CAST', 'nc|ENSG00000153113|P20810-8|CAST', 'nc|ENSG00000153113|P20810-2|CAST', 'nc|ENSG00000153113|P20810|CAST', 'nc|ENSG00000153113|P20810-9|CAST', 'nc|ENSG00000153113|P20810-5|CAST', 'nc|ENSG00000153113|P20810-10|CAST', 'nc|ENSG00000153113|P20810-7|CAST', 'ENSG00000153113|ENST00000675179|CAST', 'ENST00000513666.5_1_5:96073558-96090478:+|nuORF'] 34292 3710 GPNVINHFFCD True NCI_RA007_Epitope_Rep2 1261.5549925184898 1261.55388993586 19.077 2 -0.6626496439304809 0.19682936618196412 1.0 ['ENSG00000221813|ENST00000641698|OR6B1'] 64831 7960 LSAGLQLR True PC9_epitope_Rep6 856.51305105352 856.51194993586 40.072 2 -0.6626742847192632 0.19682936618196412 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 131736 18877 VWVWVCLRRRL True NCI_RA007_Epitope_Rep5 1484.8550781321599 1484.85343490379 79.454 3 -0.6627224772396684 0.19685720019140823 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 19332 10293 ELNCSGKYFA True H1975_Epitope_Rep3 1130.50664534374 1130.50554993586 44.644 2 -0.6627837217724172 0.19688199428880143 1.0 ['CFAP70|p.R914Mfs*44|1|0.16|ENSG00000156042|chr10:73275576-73275588|TGTGCAAGCACTC/-|frameshift_variant', 'nc|ENSG00000156042|Q5T0N1-2|CFAP70', 'nc|ENSG00000156042|Q5T0N1|CFAP70', 'ENSG00000156042|ENST00000355577|CFAP70', 'ENST00000493787.5_1_10:75056784-75072389:-|nuORF'] 62407 17742 LLRTQVRIPGE True PC9_epitope_Rep1 1280.75646920636 1280.75536993586 73.042 2 -0.6628065265206489 0.19688199428880143 1.0 ['nc|ENSG00000085982|Q9NVE5|USP40', 'ENSG00000085982|ENST00000678225|USP40', 'nc|ENSG00000085982|Q9NVE5-3|USP40'] 101247 6290 SLWHQRQP True NCI_RA007_Epitope_Rep4 1050.53591175642 1050.53480993586 30.799 2 -0.6628481841710597 0.19689439076343654 1.0 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 39210 11569 HLGVPISI True H1975_Epitope_Rep3 834.4963383602201 834.49524993586 49.628 2 -0.6629015452886134 0.19690678685538765 1.0 ['ENSG00000181004|ENST00000314218|BBS12'] 40285 16765 HRPRLLHRRRH True NCI_RA007_Epitope_Rep4 1532.91374718016 1532.9126499358601 72.669 2 -0.6629954451363108 0.19693461752176328 1.0 ['LCE2B|p.F81L|1|0.27|ENSG00000159455|chr1:152687086-152687086|C/A|missense_variant'] 42974 15419 IGARSLSVL True PC9_epitope_Rep1 914.5549158655 914.55380993586 64.128 2 -0.6631000345198281 0.19696876157550314 1.0 ['nc|ENSG00000106348|P20839-2|IMPDH1', 'nc|ENSG00000106348|P20839-4|IMPDH1', 'nc|ENSG00000106348|P20839|IMPDH1', 'nc|ENSG00000106348|P20839-3|IMPDH1', 'nc|ENSG00000106348|P20839-7|IMPDH1', 'nc|ENSG00000106348|P20839-5|IMPDH1', 'ENSG00000106348|ENST00000338791|IMPDH1', 'ENST00000469328.5_1_7:128033063-128040541:-|nuORF', 'ENST00000484496.5_1_7:128032984-128040541:-|nuORF'] 31436 4329 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 21.768 2 -0.6631160947587065 0.19696876157550314 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 134972 12286 YAFWGAASF True PC9_epitope_Rep5 1018.4548674710599 1018.45376993586 52.246 2 -0.6631191169168982 0.19696876157550314 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 125133 16988 VLPPSELLDH True NCI_RA007_Epitope_Rep2 1118.5971746003 1118.5960699358602 70.816 2 -0.6631269015003182 0.19696876157550314 1.0 ['ENSG00000160703|ENST00000409109|NLRX1', 'ENST00000481860.6_1_11:119043673-119051967:+|nuORF', 'NLRX1|p.A889Cfs*3|1|0.11|ENSG00000160703|chr11:119183168-119183169|-/G|frameshift_variant', 'nc|ENSG00000160703|Q86UT6-2|NLRX1'] 116159 8517 TVTEVVVP True PC9_epitope_Rep1 842.4749342092998 842.47382993586 37.598 2 -0.6631735939634039 0.19698115537172226 1.0 ['ENSG00000169403|ENST00000373857|PTAFR'] 54520 18752 LAAFWYYT True PC9_epitope_Rep6 1033.49091862661 1033.4898299358601 84.77 2 -0.6632380414009723 0.19701833446509043 1.0 ['ENSG00000249222|ENST00000505920|ATP5MGL'] 20951 7116 EQWWRWNRWPG True PC9_epitope_Rep4 1599.7483641341496 1599.7467149037898 34.642 3 -0.663238653026582 0.19701833446509043 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 63079 13593 LNLRDHQLPFK True NCI_RA007_Epitope_Rep1 1379.7673682432298 1379.76626993586 56.886 2 -0.6632399223327405 0.19701833446509043 1.0 ['ENSG00000126814|ENST00000261249|TRMT5'] 40907 7190 HVSSYAAFV True PC9_epitope_Rep1 979.4763311916299 979.4752299358599 32.469 2 -0.663312432084116 0.19703072673117583 1.0 ['HLA-DPA1|p.T39S|1|0.26|ENSG00000231389|chr6:33069872-33069872|T/A|missense_variant'] 90943 23471 RLFRMLRIF True PC9_epitope_Rep5 1250.7434024248598 1250.74174490379 95.267 3 -0.6633247655936911 0.19703399638894462 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.N747Kfs*10|1|0.23|ENSG00000136546|chr2:166432669-166432670|-/T|frameshift_variant'] 224 9535 AAFTGVSAA True PC9_epitope_Rep2 793.39701824177 793.39592993586 42.023 2 -0.6633351587016937 0.19703399638894462 1.0 ['ENST00000462537.3_1_6:36646652-36648255:+|nuORF'] 134660 9544 WWLRRYQQVRR True NCI_RA007_Epitope_Rep2 1645.90659611105 1645.9049549037902 41.738 3 -0.663353361227237 0.19703399638894462 1.0 ['nc|nan|A6NJI1|C11orf86'] 1485 14906 AEEMGNPDASY True H1975_Epitope_Rep2 1182.4499183132598 1182.4488299358602 62.489 2 -0.6633674817732786 0.19703399638894462 1.0 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3'] 81674 28619 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 118.69 3 -0.6634002231503012 0.19706181907965803 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 81673 28557 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 118.35 3 -0.6634713808533683 0.19712050368038517 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 10720 18393 CTSRVRQCL True PC9_epitope_Rep4 1064.5219185684 1064.52082993586 78.813 2 -0.6635138427633229 0.19714528199984568 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|356|3|anti-sense'] 38397 8409 HGIVGTIV True NCI_RA007_Epitope_Rep1 794.46503823194 794.46394993586 36.711 2 -0.6635336799657988 0.19714528199984568 1.0 ['ENSG00000131435|ENST00000253754|PDLIM4'] 28234 5943 FRSATTSGAPG True PC9_epitope_Rep1 1050.50942222506 1050.50832993586 27.674 2 -0.663574234777943 0.1971548478676788 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 25426 5389 FELDKKEK True NCI_RA007_Epitope_Rep3 1035.5600608155898 1035.5589699358602 28.206 2 -0.6635991640976819 0.1971548478676788 1.0 ['PMM1|p.S154F|1|0.22|ENSG00000100417|chr22:41583972-41583972|G/A|missense_variant'] 7852 6975 ATALASDP True NCI_RA007_Epitope_Rep5 744.36538376032 744.36483496793 33.512 1 -0.6636195172428616 0.1971548478676788 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'nc|ENSG00000067182|P19438-3|TNFRSF1A', 'ENST00000536717.5_1_12:6438480-6440154:-|nuORF', 'nc|ENSG00000067182|P19438-2|TNFRSF1A'] 117364 19056 VAATISIGPS True PC9_epitope_Rep4 914.5072969667399 914.5067449679301 81.389 1 -0.66364927923627 0.1971548478676788 1.0 ['ENSG00000158711|ENST00000357992|ELK4', 'nc|ENSG00000158711|P28324-2|ELK4'] 125312 25524 VLRVLRPLK True H1975_Epitope_Rep2 1092.74953335112 1092.74842993586 104.81 2 -0.6636778884853418 0.1971548478676788 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 117998 8820 VASHWQQLMLK True NCI_RA007_Epitope_Rep1 1339.7070764857901 1339.7059699358601 38.308 2 -0.663738859016458 0.1971548478676788 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF'] 4496 2088 AKKKKKKKKG True PC9_epitope_Rep1 1170.8288463009796 1170.82720490379 11.485 3 -0.6637441041906332 0.1971548478676788 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 43705 12266 IIQQAVYPV True PC9_epitope_Rep3 1029.5858816406098 1029.58478993586 52.209 2 -0.6638280567786279 0.19717657949548714 1.0 ['ENST00000264645.11_1_17:38327543-38327843:+|nuORF'] 95921 13953 SDVVSTRPRWN True NCI_RA007_Epitope_Rep1 1315.66329709751 1315.6622099358601 58.298 2 -0.6638301164711423 0.19717657949548714 1.0 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6', 'ENSG00000128159|ENST00000248846|TUBGCP6', 'nc|ENSG00000128159|Q96RT7-2|TUBGCP6', 'ENST00000491449.5_1_22:50658476-50664613:-|nuORF'] 81671 28243 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 116.61 3 -0.6638355408631818 0.19717657949548714 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 81670 28183 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 116.28 3 -0.6639046056926292 0.1972352505554184 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 127379 7375 VQQANQQLSRA True H1975_Epitope_Rep1 1241.64764703337 1241.64654993586 33.372 2 -0.6639340073439621 0.1972476356511409 1.0 ['nc|ENSG00000079950|O15400-2|STX7', 'ENSG00000079950|ENST00000367941|STX7'] 29370 12677 FVENSVYANIG True NCI_RA007_Epitope_Rep4 1211.5822528121498 1211.5811499358601 55.802 2 -0.6639509559207123 0.1972724046961539 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4'] 43158 6078 IGRRPFTK True NCI_RA007_Epitope_Rep5 973.5821336728499 973.58102993586 30.061 2 -0.6639540298984568 0.1972724046961539 1.0 ['nc|ENSG00000091140|P09622-2|DLD', 'ENSG00000091140|ENST00000205402|DLD', 'nc|ENSG00000091140|P09622-3|DLD'] 68460 5125 LTTWWLASP True H1975_Epitope_Rep2 1073.5545815123298 1073.5534899358602 24.789 2 -0.6639929528543982 0.1972847886454798 1.0 ['ENST00000405000.6_1_2:43871812-43885993:+|nuORF'] 11006 3576 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 18.099 2 -0.6640050682718639 0.19729717221270884 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 66183 7687 LSPKELDEKN True NCI_RA007_Epitope_Rep1 1171.6084675599898 1171.60736993586 33.894 2 -0.6640457591176898 0.19730042421905128 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 137930 10797 YPSFHWDPI True PC9_epitope_Rep4 1160.52909504048 1160.52745490379 49.29 3 -0.6640564539118959 0.19730042421905128 1.0 ['ENSG00000158321|ENST00000342771|AUTS2', 'nc|ENSG00000158321|Q8WXX7-2|AUTS2', 'nc|ENSG00000158321|Q8WXX7-5|AUTS2'] 103401 12521 SQWTRRRRRQP True H1975_Epitope_Rep3 1525.8450584836498 1525.84396993586 53.359 2 -0.6641009612569485 0.19730042421905128 1.0 ['ENST00000588173.1_1_19:13264262-13264382:+|nuORF'] 118188 6112 VAVVAHGP True NCI_RA007_Epitope_Rep3 748.4231734199599 748.42206993586 31.03 2 -0.6641274132843404 0.19730042421905128 1.0 ['ENSG00000130147|ENST00000392011|SH3BP4', 'nc|ENSG00000130147|Q9P0V3-2|SH3BP4'] 63906 11809 LPVSSNPPP True PC9_epitope_Rep2 906.4810822188999 906.47998993586 50.754 2 -0.6642245012147346 0.19738689126444228 1.0 ['nc|ENSG00000175877|Q6UE05-2|TMEM270'] 63365 13843 LPEVQVTQNP True H1975_Epitope_Rep3 1123.58733819259 1123.58624993586 58.555 2 -0.6642331585790922 0.19738689126444228 1.0 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 101093 5253 SLTYDIANNK True NCI_RA007_Epitope_Rep5 1137.56660274801 1137.56494490379 26.902 3 -0.6642725540245322 0.19739013743425213 1.0 ['ENSG00000115808|ENST00000263918|STRN', 'nc|ENSG00000115808|O43815-2|STRN'] 58994 9345 LGAHSPSTL True PC9_epitope_Rep3 881.46068112749 881.45958993586 40.885 2 -0.6642998185416057 0.19739013743425213 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF', 'ENST00000498392.1_1_3:49070551-49070749:-|nuORF'] 124795 27893 VLLFLISLE True H1975_Epitope_Rep2 1045.64233388757 1045.64122993586 116.08 2 -0.6643003250554819 0.19739013743425213 1.0 ['PRAMEF14|p.R334L|1|0.1|ENSG00000204481|chr1:13342952-13342952|C/A|missense_variant'] 125313 25613 VLRVLRPLK True H1975_Epitope_Rep2 1092.74953335112 1092.74842993586 105.15 2 -0.6643128131441709 0.19739013743425213 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 124703 10003 VLKEKVSL True PC9_epitope_Rep3 914.5800679841799 914.57896993586 43.431 2 -0.664360064282303 0.1974148967346876 1.0 ['ENST00000443016.1_1_10:11607160-11607337:-|nuORF'] 24861 4411 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 22.089 2 -0.664390230589353 0.1974148967346876 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 70174 20880 LYLILKFQN True PC9_epitope_Rep3 1150.6750309981799 1150.67392993586 85.589 2 -0.6644580541123452 0.19743051914001047 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 19837 11200 ELVEDRFR True PC9_epitope_Rep4 1062.5458077337798 1062.54470993586 50.858 2 -0.6645399027276664 0.19743051914001047 1.0 ['nc|ENSG00000181827|Q2KHR2-1|RFX7', 'nc|ENSG00000181827|Q2KHR2-2|RFX7', 'ENSG00000181827|ENST00000559447|RFX7'] 96094 12106 SEDLWLECV True H1975_Epitope_Rep2 1092.47976188956 1092.4786699358601 51.649 2 -0.6645531808373748 0.19743051914001047 1.0 ['ENSG00000137040|ENST00000259569|RANBP6'] 140385 13064 YYESLNKTL True PC9_epitope_Rep4 1129.5655401188499 1129.56444993586 58.144 2 -0.6646078590234438 0.19743051914001047 1.0 ['ENSG00000138722|ENST00000264790|MMRN1'] 3071 8309 AGAELLQRAP True H1975_Epitope_Rep3 1024.5665431783598 1024.5654499358602 36.945 2 -0.6646244645388882 0.19743051914001047 1.0 ['ENST00000471864.1_1_9:38621862-38622117:+|nuORF', 'nc|ENSG00000204860|Q5SY85|FAM201A'] 760 13782 AAVTLRLEFP True PC9_epitope_Rep6 1115.6338944621898 1115.63278993586 64.813 2 -0.6646665367758594 0.1974706971005552 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 49102 9744 KGAPREKYAK True PC9_epitope_Rep3 1146.6509415086598 1146.6493049037902 42.435 3 -0.6646985921444336 0.1974706971005552 1.0 ['ENSG00000138433|ENST00000342016|CIR1', 'ENST00000461454.1_1_2:175243642-175260410:-|nuORF', 'nc|ENSG00000138433|Q86X95-2|CIR1'] 108839 4548 TEQYIQTMTWL True H1975_Epitope_Rep3 1412.66460253712 1412.66296490379 22.614 3 -0.664768399831491 0.19749849632177172 1.0 ['ENSG00000111696|ENST00000392876|NT5DC3', 'nc|ENSG00000111696|Q86UY8-2|NT5DC3'] 5827 12199 APGALQPL True PC9_epitope_Rep6 765.43848913093 765.4379449679301 58.29 1 -0.6649275874675029 0.19755713889145923 1.0 ['nc|ENSG00000214655|A7E2V4-5|ZSWIM8', 'ENSG00000214655|ENST00000604729|ZSWIM8', 'nc|ENSG00000214655|A7E2V4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-3|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-2|ZSWIM8'] 65052 7209 LSDLASVDYDP True H1975_Epitope_Rep2 1193.54519859709 1193.54356490379 32.664 3 -0.6649329956749193 0.19756951405703005 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'ENST00000443361.1_1_9:108285096-108287232:+|nuORF'] 105102 11526 STLKNLSL True PC9_epitope_Rep2 874.5123823471799 874.51128993586 49.662 2 -0.6650600821246772 0.1976127320954907 1.0 ['ENST00000531306.1_1_11:111933212-111933263:+|nuORF'] 81672 28435 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 117.67 3 -0.6652872034206461 0.19764052741151977 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 112259 4500 TLYQNAGP True NCI_RA007_Epitope_Rep5 862.4184819623398 862.41738993586 23.962 2 -0.6653836163889482 0.1976991641735805 1.0 ['ENSG00000136738|ENST00000377524|STAM'] 95587 16753 SASIGVVGV True PC9_epitope_Rep1 787.44396843419 787.44286993586 69.268 2 -0.6654834011192233 0.19771781033153432 1.0 ['nc|ENSG00000095002|P43246-2|MSH2', 'ENSG00000095002|ENST00000233146|MSH2'] 133124 24199 WCLGWWRPCP True NCI_RA007_Epitope_Rep2 1302.5790395216998 1302.57794993586 101.63 2 -0.6655019963316646 0.19771781033153432 1.0 ['ENST00000562503.5_3_16:57806199-57831993:-|nuORF'] 13561 10464 DPLTLSPTVP True H1975_Epitope_Rep3 1038.5597264624198 1038.5586299358602 45.312 2 -0.6655232059287916 0.19771781033153432 1.0 ['ENSG00000196453|ENST00000247930|ZNF777'] 77780 23106 PADLLLFLI True PC9_epitope_Rep4 1013.61611913973 1013.61502993586 97.096 2 -0.66553816188589 0.19771781033153432 1.0 ['ENST00000455309.1_1_2:112249080-112249152:+|nuORF'] 10548 11256 CPRPGGCL True PC9_epitope_Rep5 801.3625643926899 801.36146993586 48.286 2 -0.6655991223493275 0.19776102141832816 1.0 ['ENST00000519604.5_1_20:61920746-61920884:+|nuORF'] 11115 14512 DEEEDPAEENC True H1975_Epitope_Rep3 1278.4194060306197 1278.4183099358602 61.182 2 -0.6656253217884779 0.19777339172269168 1.0 ['CBWD5|p.D18N|1|0.13|ENSG00000147996|chr9:65676028-65676028|G/A|missense_variant'] 128136 20932 VRRVGGAFGGK True NCI_RA007_Epitope_Rep2 1102.6359601508595 1102.63486993586 86.574 2 -0.6656725641192481 0.19778576164556766 1.0 ['ENSG00000138356|ENST00000374700|AOX1'] 58415 15496 LEVSGLWSL True PC9_epitope_Rep1 1002.53859709502 1002.53750993586 64.427 2 -0.6656792234282553 0.19779508133528642 1.0 ['nc|ENSG00000181982|Q6ZUS6|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-5|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-4|CCDC149', 'ENSG00000181982|ENST00000635206|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-6|CCDC149'] 130210 8701 VTSEGAGL True H1975_Epitope_Rep3 732.3653837603199 732.36483496793 38.467 1 -0.6656862274952475 0.19779508133528642 1.0 ['ENSG00000171298|ENST00000302262|GAA'] 12229 10694 DIQLEFVRIDP True H1975_Epitope_Rep1 1343.70851595443 1343.7074099358601 46.094 2 -0.6657333912803759 0.19780745035154804 1.0 ['nc|ENSG00000244038|P39656-2|DDOST', 'nc|ENSG00000244038|P39656-3|DDOST', 'ENSG00000244038|ENST00000602624|DDOST', 'nc|ENSG00000244038|P39656|DDOST'] 92172 3809 RQEVAMMRNR True NCI_RA007_Epitope_Rep5 1289.6444933125697 1289.6428349037901 20.845 3 -0.665814726355985 0.19780761937065416 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 36990 12033 GVRRSFRK True NCI_RA007_Epitope_Rep3 1004.5991807193199 1004.59808993586 54.457 2 -0.6658595717709678 0.19780761937065416 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 78637 21372 PDVVMLIAF True PC9_epitope_Rep2 1003.5412399473099 1003.54014993586 87.676 2 -0.6658687617182428 0.19780761937065416 1.0 ['nc|ENSG00000110436|P43004-3|SLC1A2', 'nc|ENSG00000110436|P43004-2|SLC1A2', 'ENSG00000110436|ENST00000278379|SLC1A2'] 82851 19107 PVTLRRRPLP True PC9_epitope_Rep1 1203.7564096367098 1203.75475490379 78.284 3 -0.6659113357292604 0.19780761937065416 1.0 ['chr11:119678765-119680483|191|11.76|0.29|5.36|-|1|NECTIN1,None|1'] 57549 10913 LEKYVKKDP True H1975_Epitope_Rep1 1118.63356010902 1118.6324699358602 46.939 2 -0.6659537663844951 0.19780761937065416 1.0 ['nc|ENSG00000144130|Q86YG4|NT5DC4', 'ENSG00000144130|ENST00000688554|NT5DC4'] 78360 7349 PATRATPPS True PC9_epitope_Rep1 896.4715801643599 896.47048993586 33.079 2 -0.665998510276642 0.19781388751850024 1.0 ['ENSG00000132326|ENST00000254657|PER2'] 56406 6714 LDSEGATPPP True H1975_Epitope_Rep3 982.46074069714 982.4596499358599 30.782 2 -0.666030762545826 0.19781388751850024 1.0 ['ENSG00000130829|ENST00000342782|DUSP9'] 63279 15405 LPARVEEEAW True PC9_epitope_Rep5 1198.59823722946 1198.5965849037902 64.264 3 -0.6660543205830723 0.19781388751850024 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40'] 134269 6672 WRRWCWRWPWR True H1975_Epitope_Rep1 1772.8735221609597 1772.87242993586 30.716 2 -0.666114873062972 0.1978262545286364 1.0 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 8921 18129 AVGKNNPVVL True PC9_epitope_Rep3 1009.5920296502098 1009.59092993586 74.934 2 -0.6661227969832056 0.197832521428131 1.0 ['HINFP|p.D165N|1|0.28|ENSG00000172273|chr11:119131616-119131616|G/A|missense_variant'] 19163 12897 ELKEDIVERLW True H1975_Epitope_Rep1 1428.7612798032796 1428.7601899358601 54.68 2 -0.6661388565500029 0.197832521428131 1.0 ['ENSG00000135763|ENST00000258243|URB2'] 68448 18036 LTTRRLGT True PC9_epitope_Rep4 916.5454138109599 916.54430993586 77.441 2 -0.6661830323141802 0.197832521428131 1.0 ['ENSG00000185002|ENST00000332958|RFX6', 'RFX4|p.Q113L|1|0.35|ENSG00000111783|chr12:106682015-106682015|A/T|missense_variant', 'nc|ENSG00000111783|Q33E94-4|RFX4', 'ENST00000536688.5_1_12:106995054-107126892:+|nuORF', 'ENSG00000111783|ENST00000392842|RFX4', 'nc|ENSG00000111783|Q33E94-2|RFX4'] 84880 6119 QHRQRWRL True PC9_epitope_Rep1 1178.6533415504998 1178.65168490379 28.351 3 -0.6662420091098968 0.19784488738842898 1.0 ['ENST00000473262.5_1_3:124837626-124909342:-|nuORF'] 81107 4903 PPGPGGGTL True NCI_RA007_Epitope_Rep5 751.38645355807 751.38534993586 25.552 2 -0.6662859157822569 0.19788808386002774 1.0 ['ENST00000430109.1_1_1:1369598-1369895:-|nuORF'] 62252 6053 LLQEDIRRHRN True NCI_RA007_Epitope_Rep1 1448.7960426025597 1448.7943949037901 27.584 3 -0.6663556385425055 0.19790044858257155 1.0 ['ENST00000511797.5_1_4:2869713-2869782:+|nuORF'] 133129 9206 WCQYQKEIMER True H1975_Epitope_Rep1 1512.6853550650396 1512.6842499358602 40.319 2 -0.6663932664411818 0.1979128129239117 1.0 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96', 'PHLDB2-CD96|1|fusion', 'PHLDB2-CD96|2|fusion'] 125667 23489 VMRILPRM True PC9_epitope_Rep3 1014.58306227298 1014.58196993586 95.628 2 -0.6664841021180027 0.1979251768840658 1.0 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1'] 81662 28234 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 119.67 3 -0.6665009881972818 0.19793754046305145 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 25472 11739 FENLDQQLR True H1975_Epitope_Rep3 1161.5778361380499 1161.5767299358602 50.297 2 -0.6665115982995826 0.19794990366088633 1.0 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 97356 14141 SFYKAKEKF True PC9_epitope_Rep1 1146.6073453611798 1146.60568490379 59.217 3 -0.6665231954489801 0.19795616387681494 1.0 ['FAM135B|p.Q1097K|1|0.53|ENSG00000147724|chr8:138148679-138148679|G/T|missense_variant'] 107060 18875 SYLQLVEISR True PC9_epitope_Rep4 1206.6608374860198 1206.6597499358602 80.688 2 -0.6665460824328613 0.19795616387681494 1.0 ['CON__P12763'] 19143 13441 ELIRNVCRDD True H1975_Epitope_Rep1 1231.59791995963 1231.5968299358601 56.814 2 -0.6665523816121041 0.19795616387681494 1.0 ['ENSG00000115526|ENST00000264249|CHST10'] 100065 19631 SLKQCLLTL True PC9_epitope_Rep1 1017.58925276889 1017.58814993586 80.336 2 -0.666688071861987 0.19798088779284834 1.0 ['nc|ENSG00000115896|Q15111-2|PLCL1', 'PLCL1|p.A1011Qfs*5|1|0.12|ENSG00000115896|chr2:198103858-198103858|G/-|frameshift_variant', 'ENSG00000115896|ENST00000428675|PLCL1'] 81661 28044 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 118.66 3 -0.6667123684328632 0.19798088779284834 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 121307 4706 VGHLRVRRFWS True PC9_epitope_Rep6 1411.79492040375 1411.79326490379 25.494 3 -0.6667461136302995 0.19799324917926667 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 85855 17553 QNEVDYAL True PC9_epitope_Rep1 950.4345259492999 950.43342993586 72.31 2 -0.6668398060300477 0.19800561018464288 1.0 ['ENST00000534425.5_1_11:67431830-67435009:-|nuORF'] 84075 9785 QEQEEEQKPRR True NCI_RA007_Epitope_Rep1 1455.7066184614696 1455.70552993586 42.064 2 -0.6669092816717245 0.1980642078818797 1.0 ['nc|ENSG00000174796|Q8TBB0-3|THAP6'] 55706 8117 LDDFEDKVFYR True H1975_Epitope_Rep1 1445.6826951294097 1445.68158993586 36.166 2 -0.6669565714768597 0.1980674094965093 1.0 ['ENSG00000119922|ENST00000371826|IFIT2'] 27435 3470 FNKKMYEEFK True NCI_RA007_Epitope_Rep2 1362.6642086143 1362.66256490379 18.155 3 -0.6669734122057718 0.1980674094965093 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 59189 13689 LGFQKRWRK True PC9_epitope_Rep5 1217.71454482473 1217.7128849037902 57.682 3 -0.6669997503023898 0.1980674094965093 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 124753 7814 VLKKKKKKKK True PC9_epitope_Rep6 1254.92274668582 1254.9211049037901 39.448 3 -0.6670215925007578 0.1980674094965093 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 446 11862 AALSLSLAGGS True H1975_Epitope_Rep3 945.51311062317 945.51200993586 50.776 2 -0.6671025453491953 0.1980921265545778 1.0 ['ENST00000380243.8_2_14:99979836-99979959:-|nuORF'] 25032 7602 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 36.623 2 -0.6671329257678191 0.1980921265545778 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 81658 27661 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 116.61 3 -0.6671414075248849 0.19810448451225152 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 121303 5047 VGHLRVRRFWS True PC9_epitope_Rep2 1411.79492040375 1411.79326490379 24.781 3 -0.6671782712994034 0.19811073613486815 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 81657 27598 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 116.27 3 -0.6672125652279519 0.19811073613486815 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 117599 9127 VAGRWQRPP True H1975_Epitope_Rep3 1065.5831963020098 1065.58208993586 40.097 2 -0.6672236889121542 0.19811073613486815 1.0 ['ENST00000464954.1_1_1:167691224-167691416:+|nuORF'] 44483 12908 INTHILKVP True PC9_epitope_Rep2 1033.6284151589298 1033.62730993586 54.947 2 -0.6672606969195982 0.19812309304404105 1.0 ['ENSG00000197646|ENST00000397747|PDCD1LG2'] 2803 8717 AEVEKWLG True H1975_Epitope_Rep2 930.4810822188998 930.47998993586 38.492 2 -0.667339519058779 0.19819097955221351 1.0 ['ENSG00000116984|ENST00000366577|MTR', 'nc|ENSG00000116984|Q99707-2|MTR', 'ENST00000470570.1_1_1:237058450-237060941:+|nuORF'] 42726 10495 IFCCLWNFVYK True H1975_Epitope_Rep3 1434.6828358839 1434.6811949037901 45.432 3 -0.6673433493234134 0.19819097955221351 1.0 ['ENST00000431677.1_1_X:100673784-100702742:+|nuORF'] 41527 14162 IDAVDTLNA True PC9_epitope_Rep3 930.46582607758 930.4652749679301 59.56 1 -0.6673633873167806 0.19819097955221351 1.0 ['nc|ENSG00000183814|Q5TKA1-2|LIN9', 'nc|ENSG00000183814|Q5TKA1-3|LIN9', 'ENSG00000183814|ENST00000681046|LIN9'] 25271 4233 FEDPQRREVA True H1975_Epitope_Rep2 1245.6101988954902 1245.60856490379 21.393 3 -0.6673751610254193 0.19820333446331165 1.0 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'nc|ENSG00000242265|Q86TG7-2|PEG10', 'nc|ENSG00000242265|Q86TG7-3|PEG10', 'nc|ENSG00000242265|Q86TG7-5|PEG10'] 122326 5663 VGRWERQR True NCI_RA007_Epitope_Rep4 1085.5842589311699 1085.58316993586 28.389 2 -0.6674155090961961 0.1982465061094932 1.0 ['ENST00000558610.5_1_15:40698281-40698377:+|nuORF'] 90682 22004 RKLLLQLKQEL True PC9_epitope_Rep6 1380.88166971948 1380.8800349037901 97.56 3 -0.6674456467143238 0.19827121307838091 1.0 ['nc|ENSG00000183323|Q86Z20-2|CCDC125', 'ENSG00000183323|ENST00000396496|CCDC125'] 13230 9451 DLTRNPHTP True NCI_RA007_Epitope_Rep5 1049.5254066423702 1049.5243099358602 42.99 2 -0.6674623993023661 0.19827121307838091 1.0 ['ENST00000526269.2_1_11:128561691-128562836:-|nuORF'] 43964 10644 ILFWFFCRFHE True PC9_epitope_Rep3 1543.7434619945095 1543.74181490379 45.89 3 -0.6675956458959202 0.1983113261328444 1.0 ['ENST00000300571.6_1_16:19870530-19870800:-|nuORF'] 24962 3263 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 18.227 2 -0.6676169922465651 0.1983113261328444 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 59359 10156 LGKSNLAEL True PC9_epitope_Rep5 943.5338460677499 943.53274993586 44.052 2 -0.6676422053577398 0.19833297383909038 1.0 ['ENST00000413171.6_1_7:872152-892516:+|nuORF', 'ENST00000475971.5_1_7:892198-892516:+|nuORF'] 83610 7119 QDVEKELRDGG True H1975_Epitope_Rep1 1244.5996937814398 1244.5985899358602 32.408 2 -0.6676516183308697 0.19833297383909038 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant'] 46366 10449 ITHQFVTEVIK True NCI_RA007_Epitope_Rep3 1313.73433677945 1313.73268490379 48.165 3 -0.6676539484430037 0.19833297383909038 1.0 ['CPS1|p.P489H|1|0.24|ENSG00000021826|chr2:210599478-210599478|C/A|missense_variant'] 59485 17461 LGPCYYLL True PC9_epitope_Rep4 940.47282603432 940.47172993586 75.162 2 -0.6677201485412299 0.19835461954428507 1.0 ['ENST00000426767.1_1_7:29690666-29690840:-|nuORF'] 9299 8406 AVSALSKVIS True PC9_epitope_Rep2 973.58079626017 973.57968993586 37.705 2 -0.6677333763677581 0.19835461954428507 1.0 ['MTMR4|p.V814Ffs*13|1|0.16|ENSG00000108389|chr17:58495702-58495702|C/-|frameshift_variant', 'nc|ENSG00000108389|Q9NYA4|MTMR4', 'ENSG00000108389|ENST00000682306|MTMR4'] 59985 17731 LHPLVSPTV True PC9_epitope_Rep6 961.5596668927701 961.55856993586 80.835 2 -0.6677418566946721 0.19835461954428507 1.0 ['ENST00000578199.5_1_17:37873700-37873802:+|nuORF'] 81495 7435 PQQIRDRLL True H1975_Epitope_Rep2 1137.66184054553 1137.66019490379 33.543 3 -0.6677577446406515 0.198366969650285 1.0 ['ENSG00000105085|ENST00000263390|MED26', 'nc|ENSG00000105085|O95402-2|MED26'] 78828 6924 PEPSVAEPPS True PC9_epitope_Rep1 1008.47639076128 1008.47528993586 31.439 2 -0.6677836791830802 0.19837931937576064 1.0 ['ENSG00000172818|ENST00000335987|OVOL1'] 128111 18961 VRRRRGAPGR True NCI_RA007_Epitope_Rep4 1179.7173387893897 1179.71624993586 82.009 2 -0.6678064307121108 0.1984194229199082 1.0 ['ENST00000306353.7_2_2:85828206-85829758:-|nuORF', 'ENST00000444380.5_1_2:85828554-85829758:-|nuORF'] 123927 3741 VKKHKKKRVV True PC9_epitope_Rep5 1248.85064437472 1248.84954993586 19.475 2 -0.6678112266951687 0.1984194229199082 1.0 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 36680 11895 GVLTVHCMV True PC9_epitope_Rep5 957.4775941449299 957.47648993586 50.751 2 -0.667837698245807 0.19842871447277208 1.0 ['nc|ENSG00000186334|Q495N2-3|SLC36A3', 'ENSG00000186334|ENST00000335230|SLC36A3', 'nc|ENSG00000186334|Q495N2-2|SLC36A3'] 47285 6789 IYFFYNCQYSS True H1975_Epitope_Rep1 1433.59618862413 1433.5950899358602 31.157 2 -0.6678850238968297 0.19842871447277208 1.0 ['ENST00000373864.5_1_1:28339722-28384581:-|nuORF'] 91435 17241 RNLRPDDVF True NCI_RA007_Epitope_Rep1 1130.58325587166 1130.5821499358601 71.194 2 -0.6679396336120978 0.19844106229589006 1.0 ['ENSG00000128268|ENST00000341184|MGAT3'] 108930 6321 TETGLTLLISK True NCI_RA007_Epitope_Rep1 1174.68090422426 1174.6792649037902 28.612 3 -0.6681129636584182 0.19852737299362272 1.0 ['ENST00000423222.5_1_1:211599560-211605712:+|nuORF'] 78706 5354 PEELQVSSPPP True NCI_RA007_Epitope_Rep2 1178.58191845898 1178.58028490379 25.444 3 -0.6681175037843611 0.19852737299362272 1.0 ['ENSG00000205208|ENST00000379205|C4orf46'] 65931 18867 LSLKQVDEFLA True H1975_Epitope_Rep1 1261.69180326113 1261.69070993586 78.675 2 -0.6681283463364343 0.1985397187264129 1.0 ['ENSG00000145725|ENST00000358359|PPIP5K2', 'nc|ENSG00000145725|O43314-2|PPIP5K2', 'ENST00000510672.1_1_5:102520366-102526739:+|nuORF'] 20072 6102 ENFLIQKREFL True PC9_epitope_Rep4 1435.7823496010299 1435.78069490379 30.481 3 -0.6682032637854611 0.1985613505437294 1.0 ['ENSG00000150783|ENST00000280358|TEX12'] 74010 7949 NHQRGHTG True PC9_epitope_Rep3 905.4216102801701 905.42050993586 35.555 2 -0.668214220554444 0.1985613505437294 1.0 ['ENSG00000196724|ENST00000396147|ZNF418'] 12739 9414 DLGNFWKVGEP True H1975_Epitope_Rep3 1260.6138872935999 1260.61278993586 41.212 2 -0.668219876582828 0.1985613505437294 1.0 ['POM121L12|p.A18V|1|0.17|ENSG00000221900|chr7:53035724-53035724|C/T|missense_variant'] 82747 11825 PVQERMWLLWQ True H1975_Epitope_Rep1 1484.7598403346399 1484.75818490379 50.48 3 -0.6682777727931264 0.1985736949925296 1.0 ['ENST00000428370.1_3_7:66038415-66041909:-|nuORF'] 20132 11404 ENLLKSLQAPE True H1975_Epitope_Rep3 1240.66631678928 1240.66520993586 48.981 2 -0.6683205700195334 0.19859532390721746 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 88006 7222 QVSLMLNWWPV True NCI_RA007_Epitope_Rep2 1371.70092847619 1371.6992849037902 32.711 3 -0.6683536417445044 0.19859532390721746 1.0 ['CBLN1|p.G135W|1|0.38|ENSG00000102924|chr16:49279583-49279583|C/A|missense_variant'] 98637 20596 SIPEYVSVRF True PC9_epitope_Rep1 1195.62372370131 1195.62262993586 84.037 2 -0.6683616513033827 0.19859532390721746 1.0 ['ENSG00000083535|ENST00000326291|PIBF1', 'nc|ENSG00000083535|Q8WXW3-4|PIBF1'] 17860 10669 EIAWISTLP True H1975_Epitope_Rep3 1028.55424715916 1028.5531499358601 46.111 2 -0.668443518392079 0.19862633978070715 1.0 ['ENSG00000180433|ENST00000641861|OR6K6', 'ENSG00000196171|ENST00000359610|OR6K2', 'nc|ENSG00000180433|Q8NGW6|OR6K6'] 121590 13261 VGLAHSVL True PC9_epitope_Rep2 794.46503823194 794.46394993586 56.282 2 -0.6684451959529462 0.19862633978070715 1.0 ['ENST00000574957.1_1_16:3075999-3076221:+|nuORF'] 25969 11887 FGYATLPWMYL True PC9_epitope_Rep1 1360.65258130144 1360.6509449037899 50.589 3 -0.6684543733003214 0.19862633978070715 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13'] 45775 10750 ISNIVWKYQ True H1975_Epitope_Rep1 1149.61824439805 1149.6171499358602 46.311 2 -0.6685020985994778 0.19862633978070715 1.0 ['ENSG00000092439|ENST00000646667|TRPM7'] 60431 19459 LIKTDESV True PC9_epitope_Rep5 903.49131254943 903.49020993586 79.902 2 -0.6685037005464612 0.19862633978070715 1.0 ['ENSG00000119636|ENST00000394009|BBOF1', 'BBOF1|p.T173Rfs*9|1|0.22|ENSG00000119636|chr14:74040584-74040585|AC/-|frameshift_variant'] 88153 16754 QWRRGLHRL True NCI_RA007_Epitope_Rep5 1220.7002917429197 1220.6991899358602 71.207 2 -0.6685230986618842 0.19862633978070715 1.0 ['SPAG9|p.M1269Ifs*14|1|0.25|ENSG00000008294|chr17:50970743-50970750|TGACAAGC/-|frameshift_variant'] 19539 7002 ELQRQEPSVEP True NCI_RA007_Epitope_Rep1 1310.6466439738597 1310.6449949037901 31.234 3 -0.6685451442350508 0.19862633978070715 1.0 ['ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2'] 90804 12301 RKRWHRWQDHH True NCI_RA007_Epitope_Rep5 1640.82974277268 1640.82864993586 53.968 2 -0.6685817736497234 0.19862633978070715 1.0 ['nc|ENSG00000106113|Q13324-3|CRHR2', 'nc|ENSG00000106113|Q13324-7|CRHR2', 'ENSG00000106113|ENST00000471646|CRHR2', 'nc|ENSG00000106113|Q13324-2|CRHR2'] 136135 7648 YGGLRGAI True PC9_epitope_Rep1 805.4446371405298 805.44354993586 34.24 2 -0.6685918678489513 0.19862633978070715 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 11429 5996 DFQELGWRDWI True NCI_RA007_Epitope_Rep2 1463.6833638357498 1463.68171490379 27.934 3 -0.6685980304186937 0.19862633978070715 1.0 ['ENST00000551553.1_1_12:57846273-57850628:+|nuORF', 'ENSG00000139269|ENST00000266646|INHBE'] 15844 7030 EDLHRWNQKRY True NCI_RA007_Epitope_Rep5 1543.7644081211101 1543.7627549037902 33.719 3 -0.6687153232805452 0.19868487919060013 1.0 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF', 'ENST00000504768.2_1_5:93246475-93410459:-|nuORF', 'nc|ENSG00000113391|Q8WUF8-4|ARB2A', 'nc|ENSG00000113391|Q8WUF8-3|ARB2A', 'ENSG00000113391|ENST00000395965|FAM172A'] 95546 4435 SARQPLGSL True PC9_epitope_Rep6 927.5137793295099 927.51268993586 24.212 2 -0.6687825203515207 0.19869721888570638 1.0 ['ENSG00000257108|ENST00000424439|NHLRC4'] 131388 17404 VVSSLLLLT True NCI_RA007_Epitope_Rep2 943.5953836951501 943.59428993586 72.44 2 -0.6688071703817078 0.19870955820077305 1.0 ['PCDHA11|p.V711L|1|0.36|ENSG00000249158|chr5:140871234-140871234|G/C|missense_variant'] 33854 17844 GLVLSLEEQL True PC9_epitope_Rep4 1099.61249031127 1099.6119749679299 76.672 1 -0.6688356363211647 0.19871577715499986 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 18519 6204 EKQQM[Oxidation]EEDLRG True NCI_RA007_Epitope_Rep2 1377.6194436302897 1377.6183499358601 28.741 2 -0.6688640586674078 0.19871577715499986 1.0 ['nc|ENSG00000102001|O60840-5|CACNA1F', 'nc|ENSG00000102001|O60840-7|CACNA1F', 'nc|ENSG00000102001|O60840-4|CACNA1F', 'nc|ENSG00000102001|O60840-6|CACNA1F', 'ENSG00000102001|ENST00000323022|CACNA1F', 'nc|ENSG00000102001|O60840|CACNA1F'] 117410 11789 VADLAHVLSL True PC9_epitope_Rep1 1036.59169529704 1036.5905899358602 50.217 2 -0.6688958600576943 0.19871577715499986 1.0 ['ENSG00000078589|ENST00000171757|P2RY10'] 75830 7214 NRDLATPVM-[Oxidation] True PC9_epitope_Rep1 1031.50698007735 1031.50588993586 32.563 2 -0.6689418998200857 0.1987250554323725 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 68628 15019 LVAFALANAL True PC9_epitope_Rep4 1001.5909670210499 1001.58986993586 65.707 2 -0.6689607256782218 0.1987250554323725 1.0 ['nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 11991 5340 DHVTVDSPY True NCI_RA007_Epitope_Rep2 1031.45598966987 1031.4548899358601 25.392 2 -0.6689785305561279 0.19873739317884365 1.0 ['ENSG00000166024|ENST00000298999|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2-2|R3HCC1L', 'nc|ENSG00000166024|Q7Z5L2|R3HCC1L'] 108100 6229 TDLPPPPPP True H1975_Epitope_Rep3 929.4858332461699 929.48472993586 28.972 2 -0.669012014573089 0.19874973054537615 1.0 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 97366 10808 SGAPAPLTGL True PC9_epitope_Rep4 882.4810822189 882.47998993586 49.331 2 -0.669055906741023 0.1987620675319876 1.0 ['nc|ENSG00000179111|Q9BYE0|HES7', 'ENSG00000179111|ENST00000541682|HES7'] 1610 8935 AEFSLHCETNL True PC9_epitope_Rep1 1262.5601374685798 1262.55904993586 39.209 2 -0.6690704409163032 0.19877440413869557 1.0 ['ENSG00000139318|ENST00000279488|DUSP6'] 124746 2777 VLKKKKKKKK True PC9_epitope_Rep4 1254.92274668582 1254.9211049037901 15.964 3 -0.6691082835002676 0.19878674036551755 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 81676 28805 PRSSSLWIELC True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 119.73 3 -0.6691340998829637 0.19879907621247114 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 32257 18010 GFNPNQGF True PC9_epitope_Rep3 879.3875161872298 879.38640993586 74.479 2 -0.6692014371181633 0.19883914275157039 1.0 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF', 'ENST00000497368.1_1_7:157023781-157024027:+|nuORF'] 11329 7004 DEWRLLSP True H1975_Epitope_Rep2 1014.5134449763399 1014.51234993586 31.864 2 -0.6692207023092818 0.19883914275157039 1.0 ['nc|ENSG00000125846|P52736-2|ZNF133', 'ENSG00000125846|ENST00000425686|ZNF133', 'nc|ENSG00000125846|P52736-5|ZNF133', 'ENST00000402618.6_1_20:18269192-18290832:+|nuORF'] 59721 5613 LGVCPPWKA True PC9_epitope_Rep5 969.5106085253699 969.50950993586 26.593 2 -0.6692735426252706 0.19884841580195214 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.R1248Pfs*56|1|0.39|ENSG00000205978|chr14:24415486-24415487|-/G|frameshift_variant'] 94291 11321 RWSRRTLYVQ True NCI_RA007_Epitope_Rep4 1363.74730150499 1363.7462099358602 50.441 2 -0.6692763493103807 0.19884841580195214 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 69231 18159 LVNGERDLL True PC9_epitope_Rep4 1027.56620882519 1027.5651099358602 77.912 2 -0.6693483010589335 0.19887614502347778 1.0 ['ENST00000529460.1_1_11:118272380-118277657:+|nuORF'] 111574 8571 TLNDTKMP True H1975_Epitope_Rep2 918.44806783846 918.44696993586 37.921 2 -0.6693686753159815 0.19891926842785887 1.0 ['IMPG1|p.G264Efs*23|1|0.4|ENSG00000112706|chr6:76018734-76018734|C/-|frameshift_variant', 'ENSG00000112706|ENST00000369950|IMPG1'] 5429 9311 ALWEYEVYKFK True H1975_Epitope_Rep1 1474.7496524904197 1474.74799490379 40.721 3 -0.6694324672434954 0.19894699570485092 1.0 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 21974 11292 ESLRCNVEPV True PC9_epitope_Rep6 1144.55465816532 1144.5535699358602 54.449 2 -0.6694987630864451 0.19895932756550386 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1', 'MDC1|p.V565Yfs*3|1|0.1|ENSG00000137337|chr6:30712249-30712249|C/-|frameshift_variant'] 18531 25906 EKRQRADD True NCI_RA007_Epitope_Rep5 1016.4999201705198 1016.49882993586 107.2 2 -0.6695589571799792 0.1990025244750939 1.0 ['SMPD3|p.V72Wfs*232|1|0.28|ENSG00000103056|chr16:68371968-68371968|C/-|frameshift_variant', 'nc|ENSG00000103056|Q9NY59-2|SMPD3', 'ENSG00000103056|ENST00000219334|SMPD3'] 136920 7965 YKDLTKINNMY True H1975_Epitope_Rep3 1401.69623701857 1401.6951299358602 35.609 2 -0.6695932522822948 0.1990025244750939 1.0 ['ENST00000421254.1_1_1:117569228-117575092:-|nuORF'] 7405 6058 ASALYNEGK True NCI_RA007_Epitope_Rep5 951.4661604307499 951.46506993586 29.984 2 -0.6696475703422888 0.1990025244750939 1.0 ['ENST00000342206.10_1_X:69385887-69385983:+|nuORF'] 65866 8936 LSKTTDMLH True PC9_epitope_Rep5 1044.52738078832 1044.5262899358602 39.317 2 -0.6696587014651426 0.1990025244750939 1.0 ['MUC16|p.A8010S|1|0.56|ENSG00000181143|chr19:8952742-8952742|C/A|missense_variant'] 62685 15358 LLWKTWYPCGK True H1975_Epitope_Rep3 1393.7216639207697 1393.72056993586 64.485 2 -0.6696678473296548 0.1990025244750939 1.0 ['USH2A|p.A3154G|1|0.38|ENSG00000042781|chr1:215817106-215817106|G/C|missense_variant'] 9098 16120 AVLDRNVAI True PC9_epitope_Rep4 969.5607295219299 969.55962993586 69.945 2 -0.6697049080672325 0.1990025244750939 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 58996 8358 LGAITLHLTP True NCI_RA007_Epitope_Rep5 1034.6124307416198 1034.61132993586 38.82 2 -0.6698017011680679 0.19901179078287104 1.0 ['ENSG00000174326|ENST00000574600|SLC16A11', 'nc|ENSG00000174326|Q8NCK7|SLC16A11'] 57606 7740 LELLWLQPA True H1975_Epitope_Rep3 1081.61718176889 1081.6160899358601 34.754 2 -0.6698075910974813 0.19901179078287104 1.0 ['nc|ENSG00000162981|Q96KN4-2|LRATD1', 'ENSG00000162981|ENST00000295092|LRATD1'] 31459 17372 GEEEEEEEDI True PC9_epitope_Rep3 1206.44118702102 1206.4400899358602 71.994 2 -0.6699778022839985 0.199067233099372 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant', 'ENST00000463046.5_1_2:61439047-61463244:-|nuORF'] 25230 18608 FEDAIYWEMP True PC9_epitope_Rep1 1299.5481758025498 1299.54706993586 76.363 2 -0.6699778399508272 0.199067233099372 1.0 ['RHCG|p.V434I|1|0.42|ENSG00000140519|chr15:89476766-89476766|C/T|missense_variant'] 137514 16343 YLQEFELL True NCI_RA007_Epitope_Rep3 1053.5382627418498 1053.5371699358602 71.991 2 -0.6701208528133017 0.19910115126516037 1.0 ['ENSG00000136051|ENST00000332180|WASHC4'] 105660 5852 SVFRDLVIK True NCI_RA007_Epitope_Rep3 1075.6389798426299 1075.6378899358601 29.996 2 -0.6701651446647582 0.19910115126516037 1.0 ['ENSG00000182481|ENST00000330459|KPNA2'] 22920 15577 EVFVPVLNI True PC9_epitope_Rep6 1028.5906326678798 1028.5895299358601 72.126 2 -0.670195061599442 0.19910115126516037 1.0 ['ENST00000475722.5_1_1:150981012-150999718:+|nuORF', 'ENSG00000143363|ENST00000271620|PRUNE1'] 103402 12959 SQWTRRRRRQP True NCI_RA007_Epitope_Rep1 1525.8450584836498 1525.84396993586 54.398 2 -0.6702185242337251 0.19910115126516037 1.0 ['ENST00000588173.1_1_19:13264262-13264382:+|nuORF'] 133858 22759 WMALLLDQET True H1975_Epitope_Rep2 1218.59546034814 1218.59380490379 93.981 3 -0.6703137337644428 0.19912273951519815 1.0 ['ENSG00000170927|ENST00000371117|PKHD1', 'PKHD1|p.Y3352Ifs*22|1|0.62|ENSG00000170927|chr6:51744487-51744488|-/T|frameshift_variant', 'nc|ENSG00000170927|P08F94-2|PKHD1'] 91949 11906 RPPLTTTATV True H1975_Epitope_Rep1 1055.5975089534702 1055.59640993586 50.797 2 -0.6703343108724236 0.19912273951519815 1.0 ['nc|ENSG00000136099|O95206-2|PCDH8', 'ENSG00000136099|ENST00000377942|PCDH8'] 10156 26515 CCCCCGGG True H1975_Epitope_Rep1 704.1208797689599 704.1203249679301 110.35 1 -0.6703564065952682 0.19912273951519815 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 65887 23962 LSLDKVSLG True PC9_epitope_Rep4 930.53859709502 930.53750993586 100.64 2 -0.6704003873248285 0.1991320005540422 1.0 ['ENSG00000204740|ENST00000454679|MALRD1'] 23495 13750 EWDDDFSPD True NCI_RA007_Epitope_Rep4 1124.3934489829599 1124.39234993586 60.116 2 -0.6704397348277975 0.1991320005540422 1.0 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 64837 8922 LSAKVVTNA True H1975_Epitope_Rep2 901.5232813840499 901.52218993586 39.28 2 -0.6704963951762268 0.1991904952445443 1.0 ['ENSG00000137776|ENST00000380516|SLTM'] 98526 20539 SILKNYDI True PC9_epitope_Rep2 964.52294703088 964.52184993586 84.437 2 -0.6705302330877937 0.1992182089598178 1.0 ['ENST00000302103.5_1_6:96561989-96651204:+|nuORF'] 110320 8172 TIIQKHYP True PC9_epitope_Rep2 998.5549158655001 998.55380993586 36.789 2 -0.670548728597401 0.1992305324715297 1.0 ['ENSG00000163961|ENST00000318037|RNF168'] 131856 8716 VYDFWRMVWQE True NCI_RA007_Epitope_Rep1 1557.70747040861 1557.70582490379 37.905 3 -0.6705851412524643 0.19923978948016374 1.0 ['nc|ENSG00000060656|Q92729-3|PTPRU', 'ENSG00000060656|ENST00000373779|PTPRU', 'nc|ENSG00000060656|Q92729-4|PTPRU', 'nc|ENSG00000060656|Q92729|PTPRU'] 76446 11829 NSYYSSPA True PC9_epitope_Rep5 887.36611203631 887.36500993586 50.498 2 -0.6705925067561264 0.19923978948016374 1.0 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 42329 5072 IELDHASLEE True NCI_RA007_Epitope_Rep2 1154.54553295026 1154.54442993586 24.354 2 -0.6706391631149835 0.1992644343222947 1.0 ['ENSG00000225830|ENST00000355832|ERCC6', 'nc|ENSG00000225830|P0DP91|ERCC6', 'ERCC6|p.N312Tfs*17|1|0.29|ENSG00000225830|chr10:49524495-49524495|T/-|frameshift_variant'] 68032 17783 LTNEGAKAL True PC9_epitope_Rep5 915.5025459394699 915.50144993586 73.42 2 -0.6706426003964481 0.1992644343222947 1.0 ['ENST00000536374.1_1_9:80851502-80863830:+|nuORF', 'nc|ENSG00000148019|Q5JTW2|CEP78', 'ENSG00000148019|ENST00000643273|CEP78', 'nc|ENSG00000148019|Q5JTW2-5|CEP78', 'nc|ENSG00000148019|Q5JTW2-2|CEP78'] 11331 6395 DEYEAHQERVL True NCI_RA007_Epitope_Rep1 1387.6368075661499 1387.6351649037902 28.9 3 -0.6706647018202279 0.19927368971778536 1.0 ['ENST00000442955.2_1_9:6669517-6669934:-|nuORF', 'ENSG00000121481|ENST00000367510|RNF2'] 37347 18273 GVWKICPI True PC9_epitope_Rep5 914.5047948689398 914.50368993586 75.3 2 -0.6706692107192861 0.19927368971778536 1.0 ['SLC6A3|p.Q503Sfs*9|1|0.32|ENSG00000142319|chr5:1406281-1406281|C/-|frameshift_variant', 'ENSG00000142319|ENST00000270349|SLC6A3'] 81898 15709 PSLPHEVSTL True PC9_epitope_Rep4 1078.5658744720201 1078.56476993586 68.351 2 -0.6707161153790828 0.1993167864342099 1.0 ['ENSG00000164588|ENST00000303230|HCN1'] 111144 9378 TLERRTLR True H1975_Epitope_Rep1 1043.61997573355 1043.6188699358602 40.982 2 -0.6707221233215207 0.1993291069120453 1.0 ['WWC3|p.Q980Rfs*4|1|0.3|ENSG00000047644|chrX:10138788-10138788|G/-|frameshift_variant', 'WWC3|p.Q1028Rfs*19|1|0.56|ENSG00000047644|chrX:10138932-10138932|G/-|frameshift_variant', 'ENSG00000047644|ENST00000380861|WWC3'] 35955 8561 GVASAVELQSW True PC9_epitope_Rep5 1145.57168812845 1145.5700549037902 37.872 3 -0.6707617693126982 0.1993383597476535 1.0 ['ENST00000567048.1_1_5:14664048-14664625:-|nuORF'] 134736 23239 WWWKLHFVWER True H1975_Epitope_Rep3 1671.84628727027 1671.84409987172 97.029 4 -0.6707703446177136 0.1993383597476535 1.0 ['MGAT2|p.T412Sfs*8|1|0.53|ENSG00000168282|chr14:49622499-49622502|CTAA/-|frameshift_variant', 'ENSG00000168282|ENST00000305386|MGAT2'] 99022 11416 SKREPENEL True PC9_epitope_Rep1 1100.5462016566 1100.5451099358602 48.789 2 -0.6710523278571651 0.19945838654582942 1.0 ['nc|ENSG00000115970|Q6YHU6-6|THADA', 'nc|ENSG00000115970|Q6YHU6-5|THADA', 'nc|ENSG00000115970|Q6YHU6-3|THADA', 'ENSG00000115970|ENST00000405975|THADA', 'ENST00000408045.7_1_2:43571220-43805671:-|nuORF', 'nc|ENSG00000115970|Q6YHU6-2|THADA'] 5118 9695 ALMAHAMEEVK True NCI_RA007_Epitope_Rep1 1228.5944148023198 1228.5933099358601 41.712 2 -0.6710970188636934 0.19948609059576564 1.0 ['ENST00000307714.12_1_1:32479575-32503673:+|nuORF', 'nc|ENSG00000121774|Q07666-3|KHDRBS1', 'nc|ENSG00000121774|Q07666-2|KHDRBS1', 'ENSG00000121774|ENST00000327300|KHDRBS1'] 64681 23685 LRKRLAPLV True NCI_RA007_Epitope_Rep4 1064.71823322284 1064.7171299358602 102.72 2 -0.6711429678894433 0.19949840752080994 1.0 ['nc|ENSG00000172728|Q6P4F1-6|FUT10', 'ENSG00000172728|ENST00000327671|FUT10', 'nc|ENSG00000172728|Q6P4F1-2|FUT10', 'nc|ENSG00000172728|Q6P4F1-3|FUT10', 'nc|ENSG00000172728|Q6P4F1-4|FUT10', 'nc|ENSG00000172728|Q6P4F1-5|FUT10', 'ENST00000520767.5_1_8:33246435-33318970:-|nuORF'] 127152 8745 VQDWYHFHYVD True NCI_RA007_Epitope_Rep1 1507.65206370747 1507.65096993586 38.018 2 -0.6711710506061181 0.19955381183167936 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D'] 108248 9795 TEALKEHEK True NCI_RA007_Epitope_Rep3 1083.5560380643099 1083.5549499358601 45.592 2 -0.6711770032040957 0.19955381183167936 1.0 ['ENST00000478275.1_1_1:212860135-212870482:-|nuORF', 'ENSG00000123685|ENST00000243440|BATF3'] 92682 18084 RRGRREEEGRP True NCI_RA007_Epitope_Rep5 1396.7395903555998 1396.7384899358601 76.359 2 -0.6712894124449913 0.19957844208194225 1.0 ['ENST00000381340.7_1_12:26985709-26985778:-|nuORF'] 124296 11296 VLDIFFEVLNY True H1975_Epitope_Rep2 1370.7122043525399 1370.7111099358601 48.497 2 -0.6712897757140356 0.19957844208194225 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1', 'ASIC1|p.C497*|1|0.25|ENSG00000110881|chr12:50081552-50081553|GC/-|frameshift_variant', 'ENSG00000110881|ENST00000447966|ASIC1', 'nc|ENSG00000110881|P78348-1|ASIC1'] 24977 3395 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 18.915 2 -0.6713500556301151 0.1995907566386658 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 134892 20735 YADKYTQTP True H1975_Epitope_Rep2 1085.50293986229 1085.50184993586 85.862 2 -0.6713657217588269 0.19959692927801112 1.0 ['ENSG00000107771|ENST00000372088|CCSER2', 'ENST00000498300.5_1_10:86198319-86273265:+|nuORF', 'nc|ENSG00000107771|Q9H7U1-4|CCSER2', 'nc|ENSG00000107771|Q9H7U1|CCSER2'] 81985 4909 PSSAQAAVI True PC9_epitope_Rep4 842.4497820906199 842.44868993586 25.476 2 -0.6713714997203513 0.19959692927801112 1.0 ['ENST00000533443.5_3_11:44960744-44968624:-|nuORF'] 66824 5505 LSVQQQAAQP True H1975_Epitope_Rep3 1068.55637241748 1068.55526993586 26.227 2 -0.671389447503343 0.19959692927801112 1.0 ['ENSG00000198492|ENST00000373812|YTHDF2', 'nc|ENSG00000198492|Q9Y5A9-2|YTHDF2', 'ENST00000604759.1_1_14:39684672-39685536:+|nuORF'] 33651 12274 GLPCIFQLQ True PC9_epitope_Rep1 1017.53173789277 1017.53064993586 52.068 2 -0.6714617529683279 0.19960924279252945 1.0 ['ENST00000523803.5_2_8:141900864-141937456:-|nuORF', 'ENST00000520892.5_2_8:141900864-142011029:-|nuORF', 'ENST00000523797.1_1_8:141935746-142011029:-|nuORF', 'ENST00000522684.5_2_8:141900864-142011289:-|nuORF'] 83503 11078 QDILYARQK True H1975_Epitope_Rep3 1133.61930702721 1133.61820993586 47.705 2 -0.6714986992237698 0.19962155592818792 1.0 ['CLYBL|p.L220Q|1|0.36|ENSG00000125246|chr13:99866264-99866264|T/A|missense_variant'] 31432 2776 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 14.763 2 -0.6715813080370472 0.19967080468257264 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 110509 9176 TIQHIVAEK True H1975_Epitope_Rep1 1037.58694426977 1037.58584993586 40.201 2 -0.6715866466929443 0.19967080468257264 1.0 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2'] 10160 25571 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 106.41 1 -0.6716013142748757 0.19967080468257264 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 24836 11228 FDAVITPVLNP True H1975_Epitope_Rep1 1184.6441247927198 1184.64302993586 48.162 2 -0.671621116738739 0.19967080468257264 1.0 ['ENSG00000184140|ENST00000328882|OR4F6'] 66026 17403 LSMPFVISV True PC9_epitope_Rep2 991.54123994731 991.54014993586 72.2 2 -0.6716908226166358 0.19969849864632044 1.0 ['ENST00000527401.5_1_11:45950959-45951256:-|nuORF'] 37387 17933 GVYIRQTL True PC9_epitope_Rep1 948.5392658013599 948.53816993586 73.77 2 -0.6716990622751636 0.19971080927256227 1.0 ['WASHC5|p.Q123R|1|0.27|ENSG00000164961|chr8:125082432-125082432|T/C|missense_variant'] 6780 4630 AQFAHSYEFY True H1975_Epitope_Rep2 1261.54038800017 1261.53874490379 22.909 3 -0.6717576344351806 0.19973850176895863 1.0 56446 14316 LDSPAALAE True PC9_epitope_Rep3 885.4443623570099 885.44326993586 60.153 2 -0.6718215141448873 0.19976619341342233 1.0 ['ENSG00000147571|ENST00000276571|CRH'] 36333 5541 GVGYYSHEVGR True H1975_Epitope_Rep3 1222.5730851107799 1222.57198993586 26.363 2 -0.6718709968758959 0.1997908110685555 1.0 ['ENSG00000160111|ENST00000443236|CPAMD8', 'nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'CPAMD8|p.V1154Sfs*25|1|0.33|ENSG00000160111|chr19:16928060-16928060|C/-|frameshift_variant'] 14369 8673 DTEKLKMYHSL True H1975_Epitope_Rep1 1363.68058695443 1363.6794899358601 38.29 2 -0.6718742657148533 0.1997908110685555 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 128086 13268 VRRLVKILLLG True PC9_epitope_Rep4 1278.8863611770998 1278.8847149037902 58.933 3 -0.6719181225467195 0.1998000461431977 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 81029 7616 PNYIRYFWHMK True H1975_Epitope_Rep3 1553.7601746878101 1553.75906993586 34.275 2 -0.6719288678574532 0.1998000461431977 1.0 ['ENST00000494129.1_1_2:192246088-192252282:+|nuORF'] 86198 6404 QPVKEQLAQA True PC9_epitope_Rep1 1110.6033226098998 1110.6022299358601 29.441 2 -0.6719826931359043 0.19981235388212132 1.0 ['ENSG00000100220|ENST00000216038|RTCB', 'ENST00000487704.5_1_22:32797732-32808215:-|nuORF'] 45796 14208 ISNWNQQI True PC9_epitope_Rep1 1001.4930438849299 1001.49194993586 59.474 2 -0.6720399975912031 0.19990156420628452 1.0 ['nc|ENSG00000163072|Q8IVI9-3|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-2|NOSTRIN', 'ENSG00000163072|ENST00000317647|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-4|NOSTRIN'] 16627 11671 EESKQKLVP True H1975_Epitope_Rep2 1056.5815245361598 1056.5804299358601 49.966 2 -0.6721224411320865 0.1999261754256448 1.0 ['ENST00000467294.1_1_3:50386754-50386910:-|nuORF', 'ENST00000461020.5_1_3:50386114-50386910:-|nuORF', 'ENST00000487632.5_1_3:50386199-50386910:-|nuORF', 'nc|ENSG00000114388|Q8WTW4-2|NPRL2', 'ENST00000429366.5_1_3:50385517-50386910:-|nuORF', 'ENSG00000114388|ENST00000232501|NPRL2'] 4350 20615 AIPALEAAL True PC9_epitope_Rep2 867.5065686907499 867.50546993586 84.73 2 -0.6721337558469733 0.1999261754256448 1.0 ['ENSG00000174844|ENST00000495027|DNAH12'] 54558 9557 LAARQVPV True PC9_epitope_Rep1 852.5181364339599 852.51702993586 41.619 2 -0.6721537306787093 0.19993540548438196 1.0 ['ENST00000533614.5_1_1:249151936-249153183:-|nuORF', 'ENST00000496411.5_1_1:249152123-249153213:-|nuORF', 'ENST00000483791.6_1_1:249152025-249153300:-|nuORF', 'ENST00000470787.6_1_1:249150751-249153213:-|nuORF', 'ENST00000412341.6_1_1:249150017-249153213:-|nuORF'] 125859 13104 VNQVVPKKRWQ True NCI_RA007_Epitope_Rep1 1380.7990027246797 1380.7979099358602 54.966 2 -0.6722208266914598 0.19993540548438196 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1-ZNF346|6|fusion', 'NSD1-C11orf58|2|fusion', 'NSD1-ZNF346|5|fusion', 'NSD1-ZNF346|4|fusion', 'NSD1-C11orf58|1|fusion', 'NSD1-ZNF346|8|fusion', 'NSD1-ZNF346|3|fusion', 'NSD1-ZNF346|7|fusion', 'NSD1|p.C2138Sfs*12|1|0.47|ENSG00000165671|chr5:177292108-177292108|G/-|frameshift_variant'] 11514 23539 DGGWCWGC True PC9_epitope_Rep4 882.2788943383799 882.27778993586 98.848 2 -0.672285573918177 0.1999846212995002 1.0 ['ENST00000593460.1_1_19:18120319-18120565:+|nuORF'] 66714 21236 LSTLPSIGW True PC9_epitope_Rep5 972.5280324113199 972.52692993586 86.734 2 -0.6723317384401771 0.1999846212995002 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 97360 12924 SFYSKKKSKD True H1975_Epitope_Rep3 1216.6451874218799 1216.6440899358602 54.94 2 -0.6723388995537373 0.1999846212995002 1.0 ['ENST00000504830.5_3_5:33662135-33683157:-|nuORF'] 43065 6836 IGHDACSYFTS True PC9_epitope_Rep2 1199.4917235555902 1199.4900749037902 31.699 3 -0.6723686140860258 0.1999846212995002 1.0 ['PIK3C2G|p.D929G|1|0.47|ENSG00000139144|chr12:18491551-18491551|A/G|missense_variant'] 100322 11614 SLMHGIRN True PC9_epitope_Rep6 926.47561999898 926.47452993586 55.797 2 -0.6724307725758831 0.1999938487089978 1.0 ['ENSG00000166716|ENST00000560079|ZNF592'] 23134 4611 EVMRRHHGGP True H1975_Epitope_Rep3 1174.57779365174 1174.57668993586 22.858 2 -0.6724612576059673 0.1999938487089978 1.0 ['ENST00000395925.7_1_7:42262820-42276591:-|nuORF', 'ENST00000448703.5_1_7:42262820-42267310:-|nuORF', 'ENST00000428534.1_1_7:42262820-42277467:-|nuORF'] 37788 6042 HCEVQRGFP True PC9_epitope_Rep1 1071.4919983391098 1071.4909099358601 28.054 2 -0.6725253747622069 0.2000061511964077 1.0 ['FCRL5|p.S500F|1|0.39|ENSG00000143297|chr1:157534796-157534796|G/A|missense_variant'] 65723 7932 LSHSPLPAHLQ True NCI_RA007_Epitope_Rep3 1198.64585612822 1198.64474993586 38.31 2 -0.6725823195344875 0.20002767910688748 1.0 ['ENSG00000157741|ENST00000473989|UBN2', 'ENST00000609762.1_1_7:138978594-138982579:+|nuORF'] 98862 5234 SIVEEYGP True NCI_RA007_Epitope_Rep3 892.4178132559998 892.41670993586 27.594 2 -0.672589370628021 0.20002767910688748 1.0 ['ENST00000261530.11_1_14:76672664-76672892:+|nuORF'] 57634 10808 LELSPALYLML True PC9_epitope_Rep1 1261.6991971406899 1261.6975649037902 46.461 3 -0.672601729942218 0.20002767910688748 1.0 ['ENST00000604105.1_1_15:21135288-21138168:-|nuORF'] 65871 8284 LSLAEKDVT True PC9_epitope_Rep6 974.5284263341399 974.5273299358599 41.476 2 -0.6726708009787856 0.20005535736252922 1.0 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'AHNAK2|p.D3788Tfs*9|1|0.29|ENSG00000185567|chr14:104944089-104944089|C/-|frameshift_variant', 'AHNAK2|p.A3880Tfs*22|1|0.17|ENSG00000185567|chr14:104943798-104943813|GTCCTTTGAGGCCGGC/-|frameshift_variant', 'AHNAK2|p.P5142Qfs*2|1|0.14|ENSG00000185567|chr14:104940026-104940026|G/-|frameshift_variant'] 121943 15293 VGPQYQAV True PC9_epitope_Rep5 860.4392174069199 860.4386649679301 63.834 1 -0.6727362730527349 0.2000738052770773 1.0 ['ENSG00000089902|ENST00000262241|RCOR1'] 24668 18269 FATEFTKVF True PC9_epitope_Rep4 1088.55424715916 1088.5531499358601 78.343 2 -0.672770726778346 0.2000738052770773 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 109012 10385 TEVSYTFSDYP True H1975_Epitope_Rep2 1307.55576328079 1307.5546699358601 44.957 2 -0.6727800579351441 0.2000738052770773 1.0 ['ENSG00000116663|ENST00000376753|FBXO6'] 19258 6208 ELLKKGGL True PC9_epitope_Rep4 856.5382031721999 856.53710993586 30.921 2 -0.672833813574704 0.2000738052770773 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'ENST00000482899.1_1_7:150737654-150742433:+|nuORF', 'NUB1-ABCB8|1|fusion', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 109113 16794 TFGVPAEELF True NCI_RA007_Epitope_Rep1 1108.54407639828 1108.5429699358601 69.453 2 -0.6728466811863686 0.20008917452068695 1.0 ['nc|ENSG00000292336|P46597-2|ASMT', 'nc|ENSG00000292336|P46597|ASMT', 'ENSG00000196433|ENST00000381241|ASMT'] 55665 8719 LDASKLKLTY True H1975_Epitope_Rep1 1150.65977485686 1150.6586699358602 38.465 2 -0.6729023434332624 0.20008917452068695 1.0 ['nc|ENSG00000054282|Q86SQ7-4|SDCCAG8'] 44763 7326 IPSLSCWAL True PC9_epitope_Rep5 988.50518879176 988.50408993586 33.139 2 -0.6729155562998269 0.20008917452068695 1.0 ['nc|ENSG00000112038|P35372-3|OPRM1'] 59335 22333 LGIYLAIGLL True PC9_epitope_Rep2 1044.65831830488 1044.6572299358602 91.388 2 -0.6729346839774749 0.20008917452068695 1.0 ['L1MB7_dup7884|chr6:109271511-109272669:-|1.663382698896682|0.075209377654616|4.47|479.0|78|3|anti-sense'] 42177 8975 IEFVCEVLDFK True H1975_Epitope_Rep1 1340.6686252883999 1340.66698490379 39.427 3 -0.6729879712271352 0.20008917452068695 1.0 ['ENSG00000123908|ENST00000220592|AGO2', 'nc|ENSG00000123908|Q9UKV8-2|AGO2', 'AGO2|p.G572Efs*3|1|0.35|ENSG00000123908|chr8:140547501-140547501|C/-|frameshift_variant'] 98772 20190 SISLSVSFPDV True PC9_epitope_Rep3 1149.59175486669 1149.59064993586 82.919 2 -0.6730513924479091 0.20014759693736356 1.0 ['nc|ENSG00000114013|P42081-5|CD86', 'nc|ENSG00000114013|P42081-6|CD86', 'nc|ENSG00000114013|P42081-4|CD86', 'nc|ENSG00000114013|P42081-3|CD86', 'ENSG00000114013|ENST00000330540|CD86'] 128088 12544 VRRLVKILLLG True PC9_epitope_Rep6 1278.8863611770998 1278.8847149037902 59.685 3 -0.6730752768856563 0.20015989422382116 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 33551 9285 GLKDGGSYEQY True H1975_Epitope_Rep1 1215.54078192299 1215.53968993586 40.626 2 -0.6731329063741375 0.20018756534038498 1.0 ['ENSG00000196562|ENST00000688720|SULF2', 'chr20:47659730-47661363|110|24.69|0.92|4.75|-|2|SULF2,None|1'] 1553 9057 AEEVWDDEQK True NCI_RA007_Epitope_Rep2 1247.5306111621096 1247.52950993586 39.833 2 -0.6731998839176733 0.20022441858677775 1.0 ['ENSG00000189433|ENST00000339480|GJB4'] 96484 2780 SEKPEMKQKW True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 14.782 3 -0.673251538480294 0.20022441858677775 1.0 ['NFIB|p.I68M|1|0.53|ENSG00000147862|chr9:14307347-14307347|G/C|missense_variant'] 57196 11282 LEETVAREL True NCI_RA007_Epitope_Rep1 1058.5607890915799 1058.5596899358602 47.866 2 -0.6732541292326639 0.20022441858677775 1.0 ['ENSG00000155980|ENST00000455537|KIF5A'] 34803 11546 GQTLIVHHIPL True H1975_Epitope_Rep3 1226.71354176522 1226.7124499358601 49.539 2 -0.6732581218862108 0.20022441858677775 1.0 ['RUSC2|p.E10Q|1|0.14|ENSG00000198853|chr9:35546549-35546549|G/C|missense_variant'] 122064 14736 VGRAGPRP True NCI_RA007_Epitope_Rep3 808.4667695674399 808.46566993586 65.373 2 -0.6733507942076616 0.20022441858677775 1.0 ['ENSG00000112164|ENST00000373256|GLP1R'] 16802 12248 EFLFHLHM True NCI_RA007_Epitope_Rep4 1072.5164221818 1072.51532993586 54.11 2 -0.6733680457647102 0.20022441858677775 1.0 ['ENST00000531716.1_1_11:73996688-73997284:-|nuORF'] 11296 5619 DESYDYWCE True H1975_Epitope_Rep3 1208.39682011124 1208.3957299358601 26.65 2 -0.6733909415266475 0.20022441858677775 1.0 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 15999 9561 EEAAVEEQEEA True H1975_Epitope_Rep2 1232.50445598392 1232.5033499358601 41.75 2 -0.6733950050684608 0.20022441858677775 1.0 ['nc|ENSG00000118194|P45379-11|TNNT2', 'nc|ENSG00000118194|P45379-6|TNNT2'] 99088 12586 SLADRDLAL True PC9_epitope_Rep5 972.52400966004 972.52290993586 53.412 2 -0.6734213358535555 0.20022441858677775 1.0 ['ENST00000492581.5_1_22:21067427-21075805:-|nuORF'] 96605 6028 SEMCLMKEDMK True NCI_RA007_Epitope_Rep1 1343.55935181655 1343.5582499358602 27.489 2 -0.6734292433538215 0.20022441858677775 1.0 ['ENSG00000196074|ENST00000357552|SYCP2'] 42530 10173 IERYKKDL True PC9_epitope_Rep1 1063.6025943339098 1063.6014899358602 44.007 2 -0.6734350874920602 0.20022441858677775 1.0 ['nc|ENSG00000160404|Q8N2E6|TOR2A', 'nc|ENSG00000160404|Q5JU69-2|TOR2A', 'ENSG00000160404|ENST00000373284|TOR2A'] 76457 6999 NTATLNIFKT True H1975_Epitope_Rep3 1121.6080736371698 1121.6069699358602 31.885 2 -0.673470167560817 0.20022441858677775 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant'] 11595 15183 DGYFGGARV True PC9_epitope_Rep5 940.4402800360798 940.43918993586 63.409 2 -0.6734793452188998 0.20022441858677775 1.0 ['ENSG00000044446|ENST00000379942|PHKA2', 'nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 84241 10225 QEVGYSIRFED True NCI_RA007_Epitope_Rep5 1341.62009487285 1341.61898993586 45.963 2 -0.6735528887794795 0.2002428490186133 1.0 ['ENSG00000109606|ENST00000336812|DHX15'] 120904 14754 VGEALKTVL True PC9_epitope_Rep6 928.5593325396 928.55822993586 68.701 2 -0.6735581997741452 0.2002428490186133 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-2|DMD'] 70896 9048 MEIMLHVPQL True PC9_epitope_Rep5 1209.6249866546098 1209.6233549037902 39.748 3 -0.6735722214467933 0.2002428490186133 1.0 ['TOPORS|p.G873Vfs*29|1|0.11|ENSG00000197579|chr9:32541889-32541907|GTTGTATCAGTAGCTTTTC/-|frameshift_variant'] 67085 15606 LTCTWKGSI True PC9_epitope_Rep2 1007.5110024481899 1007.50990993586 65.307 2 -0.6735742720268718 0.2002428490186133 1.0 ['nc|ENSG00000157303|Q96L08-2|SUSD3', 'ENSG00000157303|ENST00000375472|SUSD3'] 99916 12418 SLIAPGSLNAA True PC9_epitope_Rep1 1012.55530978832 1012.55420993586 52.628 2 -0.6736003391454553 0.20027051120469705 1.0 ['ENSG00000172478|ENST00000388934|MAB21L4'] 111049 15382 TLDQQVVI True PC9_epitope_Rep1 914.5072969667399 914.50618993586 63.985 2 -0.673614846153222 0.20028280282188032 1.0 ['ENSG00000146263|ENST00000683635|MMS22L'] 100982 11563 SLSTVKHF True PC9_epitope_Rep1 917.49706663621 917.49596993586 49.355 2 -0.6736567135321365 0.20029509406123203 1.0 ['PCDH18|p.V1011Cfs*15|1|0.35|ENSG00000189184|chr4:137521407-137521408|-/G|frameshift_variant', 'nc|ENSG00000189184|Q9HCL0-2|PCDH18', 'ENSG00000189184|ENST00000344876|PCDH18'] 60769 7769 LKERLTKI True H1975_Epitope_Rep2 999.6440652230699 999.64296993586 34.831 2 -0.6736899120637451 0.20032275416890802 1.0 ['ENSG00000154359|ENST00000398246|LONRF1', 'nc|ENSG00000154359|Q17RB8-2|LONRF1'] 116150 12828 TVTEITLI True H1975_Epitope_Rep2 888.5167990212799 888.51570993586 54.451 2 -0.6737947411187173 0.2003442552406713 1.0 ['OR6M1|p.D119*|1|0.27|ENSG00000196099|chr11:123805995-123805996|-/A|frameshift_variant', 'OR6M1|p.C238Lfs*31|1|0.17|ENSG00000196099|chr11:123805637-123805638|-/A|frameshift_variant', 'ENSG00000196099|ENST00000309154|OR6M1'] 55397 9271 LASTRYPPP True PC9_epitope_Rep6 1000.5341804209199 1000.53308993586 45.815 2 -0.6738006794116722 0.2003442552406713 1.0 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 130807 11528 VVEWDKETRDF True NCI_RA007_Epitope_Rep5 1422.6779441021397 1422.6768499358602 50.994 2 -0.6738181900392877 0.2003442552406713 1.0 ['ENSG00000103404|ENST00000219689|USP31'] 99150 6285 SLAPKHPG True NCI_RA007_Epitope_Rep2 805.44463714053 805.44354993586 29.054 2 -0.6738301103434506 0.2003473075977379 1.0 ['ENSG00000240247|ENST00000382689|DEFA1B', 'ENSG00000239839|ENST00000327857|DEFA3', 'ENSG00000206047|ENST00000382692|DEFA1'] 77956 6156 PALAGPPAH True PC9_epitope_Rep5 829.44463714053 829.44354993586 28.663 2 -0.6739021427290739 0.2003473075977379 1.0 ['ENSG00000139800|ENST00000267294|ZIC5'] 67014 20341 LTALPRHGRI True PC9_epitope_Rep5 1132.68291034328 1132.6818099358602 83.277 2 -0.6739120756016368 0.2003473075977379 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 98726 19318 SIRRVYTRL True NCI_RA007_Epitope_Rep1 1162.69347502698 1162.69183490379 79.298 3 -0.6739121296100175 0.2003473075977379 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 45532 6323 ISFREEQEK True NCI_RA007_Epitope_Rep2 1164.5775017848798 1164.57640993586 29.202 2 -0.6739261901079514 0.20036880522474068 1.0 ['ENSG00000148843|ENST00000369797|PDCD11'] 21680 17050 ERVTHFRDMLL True PC9_epitope_Rep5 1415.73435386279 1415.7332499358602 70.602 2 -0.6739452205812269 0.20036880522474068 1.0 ['ENSG00000176769|ENST00000368642|TCERG1L', 'ENST00000483040.1_1_10:132891427-132954311:-|nuORF'] 69363 11351 LVQAVLGGSL True PC9_epitope_Rep1 955.5702315764698 955.56912993586 48.54 2 -0.6739536071724409 0.20036880522474068 1.0 ['ENSG00000131584|ENST00000354700|ACAP3', 'ACAP3-DVL1|1|fusion', 'nc|ENSG00000131584|Q96P50-4|ACAP3', 'ENST00000467278.5_1_1:1228946-1234134:-|nuORF', 'nc|ENSG00000131584|Q96P50-1|ACAP3'] 101966 18864 SPLWLGEAGP True PC9_epitope_Rep1 1025.5181960036098 1025.5170899358602 77.346 2 -0.6739828281501545 0.20039645952424856 1.0 ['ENST00000555147.1_1_16:89984433-89984928:+|nuORF'] 67222 11118 LTDLHGLRRIF True PC9_epitope_Rep3 1339.77245362367 1339.7707949037901 47.763 3 -0.6740186499290935 0.2004087465617653 1.0 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000587504.5_1_17:73835995-73839803:-|nuORF', 'nc|ENSG00000092929|Q70J99-2|UNC13D', 'ENST00000591563.5_1_17:73836050-73840487:-|nuORF'] 78149 6318 PAPLRAAPAA True PC9_epitope_Rep4 933.5396001545298 933.53850993586 31.364 2 -0.6740373871110705 0.20041795356412975 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 122281 12671 VGRSFEPIIK True PC9_epitope_Rep3 1144.6604435631998 1144.65880490379 53.764 3 -0.6740512480382488 0.20041795356412975 1.0 ['nc|ENSG00000179988|Q8IV42-2|PSTK'] 33566 7566 GLKKGYWAP True H1975_Epitope_Rep3 1018.5600012459398 1018.55890993586 34.083 2 -0.6741016419352552 0.20043023970497847 1.0 ['ENSG00000165684|ENST00000684778|SNAPC4'] 45440 7310 ISEAMEGPPP True H1975_Epitope_Rep3 1026.4691972058597 1026.46808993586 33.09 2 -0.6741160134686139 0.20043944562244553 1.0 ['ENST00000312990.10_1_12:58142143-58142311:-|nuORF'] 47239 13637 IYDYAIVLFK True NCI_RA007_Epitope_Rep1 1243.6852613287099 1243.6841699358602 57.055 2 -0.6741210953301762 0.20043944562244553 1.0 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3', 'chr4:25782418-25788224|110|20.14|0.74|4.77|-|0|SEL1L3,SEL1L3|1'] 119065 14603 VEHFSQEEL True PC9_epitope_Rep4 1116.50875351872 1116.5076499358602 64.098 2 -0.6741380912911779 0.20046709586220673 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF', 'CDK5RAP2|p.M736*|1|0.22|ENSG00000136861|chr9:120458619-120458619|T/-|frameshift_variant'] 10230 4387 CFIFKKTVRD True NCI_RA007_Epitope_Rep2 1255.6747137283498 1255.6730549037902 21.701 3 -0.6741736615628693 0.20047938049290148 1.0 ['ENSG00000177990|ENST00000324472|DPY19L2', 'ENST00000414296.2_1_7:29749661-29781880:+|nuORF'] 44180 17604 ILQYNKLLE True PC9_epitope_Rep5 1132.6492101731599 1132.64810993586 72.723 2 -0.6742385147541622 0.20051623212008543 1.0 ['nc|ENSG00000085978|Q676U5-4|ATG16L1', 'nc|ENSG00000085978|Q676U5-5|ATG16L1', 'nc|ENSG00000085978|Q676U5-2|ATG16L1', 'ENSG00000085978|ENST00000392017|ATG16L1', 'nc|ENSG00000085978|Q676U5-3|ATG16L1', 'ENST00000479942.5_1_2:234160473-234198706:+|nuORF', 'ENST00000485623.5_1_2:234160473-234172712:+|nuORF', 'ENST00000474148.5_1_2:234160473-234181699:+|nuORF'] 117659 10737 VAITEALL True H1975_Epitope_Rep3 828.4956696538799 828.49456993586 46.378 2 -0.6742581096950948 0.20051623212008543 1.0 ['GCH1|p.R198L|1|0.28|ENSG00000131979|chr14:54845801-54845801|C/A|missense_variant'] 87640 17319 QTYYLKISLEV True PC9_epitope_Rep4 1355.73366807311 1355.73256993586 74.625 2 -0.6742745300540539 0.20051623212008543 1.0 ['ENST00000247815.8_1_12:66717785-66717878:+|nuORF'] 45672 16539 ISKETPAPV True PC9_epitope_Rep2 940.5229470308799 940.52184993586 68.856 2 -0.6743428273876271 0.2005561615633978 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 57596 12997 LELKDGQQIPV True NCI_RA007_Epitope_Rep2 1238.68705223386 1238.6859499358602 55.18 2 -0.6743731397289234 0.2005561615633978 1.0 ['ENST00000490251.1_1_7:43679183-43685017:-|nuORF', 'ENSG00000106603|ENST00000223336|COA1'] 905 10059 ADNILSAVP True H1975_Epitope_Rep2 898.47599683846 898.47544496793 43.683 1 -0.6744250406184656 0.20058380703641113 1.0 ['nc|ENSG00000198022|A6NJ88|SAGE2P'] 83118 16050 PYPIQPQLP True H1975_Epitope_Rep1 1051.57023157647 1051.56967496793 67.073 1 -0.6745614185428197 0.20065445830516807 1.0 ['ENSG00000167987|ENST00000301765|VPS37C'] 38935 10722 HIPRRKPF True PC9_epitope_Rep6 1049.62466719117 1049.6235699358601 52.055 2 -0.6745671390420072 0.20065445830516807 1.0 ['ENST00000301332.2_1_8:145692465-145692931:+|nuORF'] 136039 17779 YFRSYKLLLKK True NCI_RA007_Epitope_Rep3 1457.8758560630497 1457.87422490379 77.95 3 -0.6745821323529634 0.20065749047560527 1.0 ['ENSG00000197498|ENST00000441448|RPF2'] 45781 6245 ISNKTVAV True PC9_epitope_Rep6 830.4861675993399 830.48506993586 32.511 2 -0.6745868271715051 0.20065749047560527 1.0 ['NUP210L|p.Q1121K|1|0.36|ENSG00000143552|chr1:154054350-154054350|G/T|missense_variant'] 46339 8451 ITFVVLMFGP True NCI_RA007_Epitope_Rep5 1122.61473924074 1122.6136499358602 39.189 2 -0.6746563405360971 0.20065749047560527 1.0 ['OR4M1|p.I248F|1|0.12|ENSG00000176299|chr14:19781064-19781064|A/T|missense_variant'] 126639 6892 VPQGSAVLTG True H1975_Epitope_Rep3 927.5025459394699 927.50144993586 31.469 2 -0.6746806084262684 0.20065749047560527 1.0 ['ENSG00000223731|ENST00000686983|SUPT20HL1', 'nc|ENSG00000223731|Q3ZLR7|SUPT20HL1'] 98878 9354 SIVTMLMLML True PC9_epitope_Rep5 1150.61639611686 1150.6147349037901 40.935 3 -0.6747623478332447 0.20070049311028157 1.0 ['ENSG00000163527|ENST00000295770|STT3B'] 55951 9341 LDHSMWFHAP True H1975_Epitope_Rep2 1239.54951321523 1239.54840993586 40.892 2 -0.6748087698283083 0.20071277151371777 1.0 ['ENST00000484975.5_1_20:44472013-44472349:-|nuORF', 'ENSG00000101473|ENST00000217455|ACOT8'] 66543 16664 LSSHLPELS True PC9_epitope_Rep5 981.51311062317 981.51200993586 69.103 2 -0.6748617596192841 0.20071579982181806 1.0 ['ENST00000358994.8_1_9:131910717-131910795:+|nuORF'] 29203 21868 FVAWMHFL True PC9_epitope_Rep2 1049.51569390581 1049.5145899358602 89.591 2 -0.6748689603045346 0.20071579982181806 1.0 ['ENSG00000148344|ENST00000340607|PTGES'] 124358 11356 VLDSNVKHF True PC9_epitope_Rep5 1057.55564414149 1057.5545499358602 48.677 2 -0.6748813802692583 0.20071579982181806 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 66744 19126 LSTSETTVAP True PC9_epitope_Rep1 1004.50260550912 1004.50150993586 78.359 2 -0.6748867763749422 0.20071579982181806 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'ENST00000583043.5_1_18:67684852-67806940:-|nuORF'] 3153 7221 AGEAGPKYHDS True NCI_RA007_Epitope_Rep1 1130.4992514641801 1130.49814993586 32.077 2 -0.675028607295928 0.20074343732239683 1.0 ['nc|ENSG00000079931|Q6UVY6-2|MOXD1', 'ENSG00000079931|ENST00000367963|MOXD1'] 8583 4817 AVAEGAKN True NCI_RA007_Epitope_Rep1 758.3922672145001 758.39116993586 22.819 2 -0.6752888668559964 0.20082326017171734 1.0 ['nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2', 'nc|ENSG00000123143|Q16512-3|PKN1', 'ENST00000585839.5_1_19:14544333-14578454:+|nuORF', 'nc|ENSG00000123143|Q16512-2|PKN1', 'ENSG00000123143|ENST00000242783|PKN1', 'ENSG00000160447|ENST00000291906|PKN3'] 81214 19065 PPLPLPPPP True PC9_epitope_Rep1 923.5480395799099 923.54694993586 78.124 2 -0.6753444363521793 0.20082326017171734 1.0 ['ENSG00000092445|ENST00000263798|TYRO3', 'ENST00000560992.1_1_15:41851455-41853662:+|nuORF', 'nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1', 'MAMLD1|p.P359L|1|0.23|ENSG00000013619|chrX:150470649-150470649|C/T|missense_variant', 'ENSG00000188493|ENST00000378313|ACTMAP'] 62875 21532 LMRFRKPWPLR True NCI_RA007_Epitope_Rep4 1498.8707281962998 1498.86907490379 93.349 3 -0.6753963564208136 0.20082326017171734 1.0 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 99540 10302 SLEWLEITK True H1975_Epitope_Rep3 1117.60192562757 1117.60082993586 44.68 2 -0.6754061108739373 0.20082326017171734 1.0 ['nc|ENSG00000154645|Q9H9P2-3|CHODL', 'chr21:17917400-18256509|409|12.4|0.24|5.68|+|ENST00000400131|CHODL,CHODL'] 58888 9388 LFTIDLYT True NCI_RA007_Epitope_Rep5 984.51679902128 984.51570993586 42.75 2 -0.6754675344903142 0.2008508938993672 1.0 ['ENSG00000100191|ENST00000266086|SLC5A4'] 57081 8571 LEELEAAR True PC9_epitope_Rep1 929.4818104948899 929.48070993586 37.805 2 -0.6756583973622556 0.20092460335744675 1.0 ['ENSG00000108479|ENST00000588479|GALK1'] 99436 15040 SLEIEKLEQEK True H1975_Epitope_Rep1 1344.7136609045199 1344.71256993586 63.099 2 -0.675769413443442 0.2009829519275073 1.0 ['CON__ENSEMBL:ENSBTAP00000034412'] 123375 19389 VICFIEREVP True PC9_epitope_Rep1 1203.63218021003 1203.63108993586 79.391 2 -0.6758544877840802 0.2010412987052879 1.0 ['nc|ENSG00000184226|Q9HC56-2|PCDH9', 'ENSG00000184226|ENST00000377865|PCDH9'] 59767 6069 LGYLYRKFWFK True NCI_RA007_Epitope_Rep3 1519.8339912510698 1519.83235490379 30.855 3 -0.6759009557031563 0.20106892738665683 1.0 ['ENSG00000249715|ENST00000624922|FER1L5', 'nc|ENSG00000249715|A0AVI2-4|FER1L5', 'nc|ENSG00000249715|A0AVI2-2|FER1L5'] 10115 16044 AYWYILSI True PC9_epitope_Rep1 1027.5378688190299 1027.53676993586 66.528 2 -0.6759069244711321 0.2010811973031499 1.0 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.R1708Afs*23|1|0.17|ENSG00000185010|chrX:154928668-154928668|G/-|frameshift_variant', 'F8|p.E1756Nfs*16|1|0.1|ENSG00000185010|chrX:154906527-154906527|C/-|frameshift_variant', 'F8|p.T1468Kfs*91|1|0.69|ENSG00000185010|chrX:154929363-154929387|CTTTGATCACCAGTCATCTCCAAGG/-|frameshift_variant', 'F8|p.E1053Kfs*2|1|0.57|ENSG00000185010|chrX:154930632-154930633|TC/-|frameshift_variant'] 57005 7873 LEEEFQWLK True H1975_Epitope_Rep3 1220.607739284 1220.60664993586 35.259 2 -0.6759413146895444 0.20110573600552867 1.0 ['IP6K2|p.E151Q|1|0.12|ENSG00000068745|chr3:48691460-48691460|C/G|missense_variant'] 130820 16762 VVFFDITV True PC9_epitope_Rep4 938.5113197180199 938.51022993586 72.441 2 -0.6759458141839828 0.20110573600552867 1.0 ['nc|ENSG00000288867|A0A0B4J2A2|PPIAL4C', 'ENSG00000270339|ENST00000584068|PPIAL4H', 'ENSG00000263353|ENST00000577856|PPIAL4A'] 28537 16070 FSIFCSPKLML True PC9_epitope_Rep5 1284.6610378101598 1284.65938490379 66.802 3 -0.675991047547417 0.20111800479144912 1.0 ['ENST00000254950.12_1_16:69358252-69358534:+|nuORF'] 25000 3503 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 19.307 2 -0.6760109706086722 0.20113027320054672 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 32399 26276 GGGGGCCCG True H1975_Epitope_Rep2 669.16690136125 669.16635496793 108.08 1 -0.6760476290849731 0.20113636363636364 1.0 ['ENST00000431489.5_1_2:62932928-62934072:+|nuORF'] 15954 7193 EDTQCDNSGP True H1975_Epitope_Rep2 1064.37166799256 1064.3705699358602 32.602 2 -0.6760749326932711 0.20113636363636364 1.0 ['TOPORS|p.E925Q|1|0.06|ENSG00000197579|chr9:32541752-32541752|C/G|missense_variant'] 39241 13184 HLKVQFLLF True PC9_epitope_Rep4 1143.68045073179 1143.67879490379 58.609 3 -0.6761277723341746 0.20113636363636364 1.0 ['PLA1A|p.D48H|1|0.25|ENSG00000144837|chr3:119606842-119606842|G/C|missense_variant'] 115645 16073 TVKCHLDL True PC9_epitope_Rep1 927.4847877003499 927.48368993586 66.64 2 -0.6761936618576894 0.20113936490387568 1.0 ['ENST00000298159.10_1_14:35182006-35182069:-|nuORF'] 28153 6740 FRKSPSLAAF True NCI_RA007_Epitope_Rep3 1122.6185787512197 1122.61693490379 33.603 3 -0.6762181039485944 0.20113936490387568 1.0 ['nc|ENSG00000197093|Q96RP7-2|GAL3ST4', 'ENST00000423751.2_1_7:99757553-99764836:-|nuORF', 'ENSG00000197093|ENST00000360039|GAL3ST4'] 12248 15601 DIRFYMYELLK True NCI_RA007_Epitope_Rep1 1489.7639226555696 1489.76282993586 64.774 2 -0.6762264432119193 0.20113936490387568 1.0 ['ENSG00000070770|ENST00000262506|CSNK2A2', 'ENST00000562367.1_1_16:58208309-58230657:-|nuORF'] 115741 7288 TVLLLKKKKK True NCI_RA007_Epitope_Rep4 1197.85366406649 1197.85201490379 34.669 3 -0.676229058782081 0.20113936490387568 1.0 ['ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 108985 21915 TEVEVESFDVP True H1975_Epitope_Rep2 1249.57141334493 1249.57030993586 90.616 2 -0.6762465715002578 0.2011485428246783 1.0 ['ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.L1277Afs*4|1|0.37|ENSG00000214814|chr8:124069468-124069469|TC/-|frameshift_variant'] 14296 22036 DTAVWQAECL True PC9_epitope_Rep4 1134.5015599632998 1134.4999049037901 92.982 3 -0.6762551275263629 0.2011485428246783 1.0 ['ENSG00000178409|ENST00000369042|BEND3', 'BEND3|p.E692Rfs*21|1|0.12|ENSG00000178409|chr6:107069117-107069118|-/G|frameshift_variant'] 28632 11503 FSRRNLYKQDL True NCI_RA007_Epitope_Rep1 1438.7680965192196 1438.76644490379 48.71 3 -0.6762791773244408 0.2011608088811092 1.0 ['ENST00000475622.5_1_5:1483549-1494822:-|nuORF'] 111906 19349 TLRRRLLAPE True NCI_RA007_Epitope_Rep5 1223.7462388758297 1223.7445949037901 81.305 3 -0.6763417068176132 0.20118842893993366 1.0 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 53044 8517 KRYAWKRRWFV True NCI_RA007_Epitope_Rep1 1594.8997198254597 1594.8980849037903 37.13 3 -0.6764204005892844 0.20120069400727786 1.0 ['nc|ENSG00000109458|Q13480-2|GAB1', 'ENSG00000109458|ENST00000262994|GAB1', 'GAB1|p.P311Qfs*24|1|0.19|ENSG00000109458|chr4:143438336-143438336|C/-|frameshift_variant'] 44422 8376 INGTVYLSEKD True H1975_Epitope_Rep1 1237.6190322436898 1237.61792993586 37.146 2 -0.6764484071510365 0.20124366651312758 1.0 ['nc|ENSG00000184226|Q9HC56-2|PCDH9', 'ENSG00000184226|ENST00000377865|PCDH9'] 129970 19977 VTNVGAYILYF True PC9_epitope_Rep3 1258.65977485686 1258.6586699358602 82.087 2 -0.676468410905721 0.20126819382177732 1.0 ['ENSG00000109929|ENST00000264027|SC5D', 'ENST00000534455.5_1_11:121174081-121175207:+|nuORF', 'ENST00000531140.1_1_11:121174081-121177378:+|nuORF', 'ENST00000524683.5_1_11:121174081-121174345:+|nuORF'] 20524 19004 EPWMMEKKLSK True PC9_epitope_Rep5 1405.70977890773 1405.70868993586 78.126 2 -0.6764796548613244 0.20126819382177732 1.0 ['ENSG00000089335|ENST00000505242|ZNF302', 'ENST00000509196.1_1_19:35173669-35176139:+|nuORF', 'nc|ENSG00000089335|Q9NR11|ZNF302', 'nc|ENSG00000197841|Q2M3W8-3|ZNF181', 'ENSG00000197841|ENST00000492450|ZNF181'] 12177 15637 DILDHERKRRV True H1975_Epitope_Rep1 1435.80079362983 1435.7996899358602 65.434 2 -0.6764960529811451 0.20132342555347438 1.0 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant', 'SRRM2|p.D2086*|1|0.13|ENSG00000167978|chr16:2766782-2766783|-/G|frameshift_variant', 'ENST00000575701.4_1_16:2806365-2807581:+|nuORF', 'SRRM2|p.V1523Lfs*25|1|0.1|ENSG00000167978|chr16:2765094-2765094|A/-|frameshift_variant'] 57527 10457 LEKRSDSL True PC9_epitope_Rep3 946.5083595959 946.50726993586 45.16 2 -0.6764965616361318 0.20132342555347438 1.0 ['ENSG00000181649|ENST00000314222|PHLDA2'] 65782 11656 LSIQNYHTF True NCI_RA007_Epitope_Rep4 1121.55055876105 1121.54946993586 51.793 2 -0.6765866806735934 0.20136330140014738 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.D4522Y|1|0.14|ENSG00000084674|chr2:21001858-21001858|C/A|missense_variant'] 34109 6856 GPALSPRD True NCI_RA007_Epitope_Rep5 811.41881631551 811.41770993586 33.055 2 -0.6766006863585098 0.20136330140014738 1.0 ['ENST00000300181.6_2_7:100075638-100075929:-|nuORF'] 125578 15469 VLYRTTLP True PC9_epitope_Rep6 961.5596668927699 961.55856993586 71.671 2 -0.6766294177987077 0.20138473111346505 1.0 ['nc|ENSG00000170266|P16278-3|GLB1', 'nc|ENSG00000170266|P16278|GLB1', 'ENSG00000170266|ENST00000307363|GLB1', 'nc|ENSG00000170266|P16278-2|GLB1'] 96091 7360 SEDLQVVAH True H1975_Epitope_Rep2 996.48762415132 996.48652993586 33.251 2 -0.6766380960375088 0.20138473111346505 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A', 'nc|ENSG00000159398|Q6NT32-3|CES5A'] 37684 5170 HALLEKAQ True NCI_RA007_Epitope_Rep1 908.50796567308 908.50686993586 24.192 2 -0.67663933810341 0.20138473111346505 1.0 ['ENSG00000175931|ENST00000319380|UBE2O'] 63117 22168 LNPAQKLML True PC9_epitope_Rep1 1026.5895871220598 1026.58848993586 90.086 2 -0.6766774924083654 0.2013969910961007 1.0 ['ENSG00000147050|ENST00000611820|KDM6A', 'nc|ENSG00000147050|O15550|KDM6A', 'KDM6A|p.E861Nfs*6|2|0.38|ENSG00000147050|chrX:45070234-45070234|A/-|frameshift_variant'] 127275 8790 VQLEEEIE True PC9_epitope_Rep3 987.4760564081098 987.47494993586 38.762 2 -0.676691686044686 0.20140615885296737 1.0 ['ENSG00000270765|ENST00000604641|GAS2L2', 'GAS2L2|p.P187Rfs*28|2|0.21|ENSG00000270765|chr17:35750144-35750144|G/-|frameshift_variant', 'nc|ENSG00000270765|Q8NHY3-2|GAS2L2'] 25470 11583 FENLDQQLR True H1975_Epitope_Rep1 1161.5778361380499 1161.5767299358602 49.541 2 -0.6767298983735371 0.20140615885296737 1.0 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 73286 10131 NEIKDSVVAGF True H1975_Epitope_Rep2 1177.5979028762897 1177.5968099358602 43.968 2 -0.6767679137424918 0.2014184179420659 1.0 ['ENSG00000167658|ENST00000309311|EEF2'] 104354 7758 SSFIHSVSI True PC9_epitope_Rep5 975.50254593947 975.50144993586 34.782 2 -0.6767833806075838 0.20143365874623934 1.0 ['ENST00000356978.8_1_14:90871105-90871177:+|nuORF'] 76666 6849 NTKLDDLF True NCI_RA007_Epitope_Rep4 964.48656152216 964.48546993586 32.966 2 -0.6768162507071847 0.20143365874623934 1.0 ['ENSG00000138095|ENST00000260665|LRPPRC', 'ENST00000463456.5_1_2:44115741-44128754:-|nuORF', 'ENST00000419884.5_1_2:44115741-44117437:-|nuORF'] 100274 9338 SLLRNVPP True H1975_Epitope_Rep3 894.5287011176599 894.52760993586 40.918 2 -0.676828806040879 0.20143365874623934 1.0 ['ENST00000440595.5_1_20:32580682-32582022:-|nuORF'] 18673 8452 ELCSLHTYHDL True H1975_Epitope_Rep1 1329.60233663373 1329.6012299358601 37.439 2 -0.6768511772924987 0.20143365874623934 1.0 ['ENST00000519937.6_1_2:85886341-85886767:-|nuORF'] 5525 6297 ANEMFRIFS True NCI_RA007_Epitope_Rep5 1113.5277151414898 1113.52660993586 30.9 2 -0.6769501041939873 0.20143365874623934 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 133678 18856 WKWFKHIIRFI True NCI_RA007_Epitope_Rep4 1572.9081592508398 1572.90652490379 81.554 3 -0.6769799190660636 0.20143962183068329 1.0 ['ENST00000409175.5_1_2:160599702-160602296:+|nuORF'] 130139 14738 VTRLVYQVV True PC9_epitope_Rep5 1075.6389798426299 1075.6378899358601 61.689 2 -0.6769994123629858 0.20143962183068329 1.0 ['ENST00000222005.6_1_19:10501827-10502160:-|nuORF'] 14618 14297 DVLLDETL True PC9_epitope_Rep1 916.47532813212 916.47422993586 59.818 2 -0.6770006495162083 0.20143962183068329 1.0 ['nc|ENSG00000143457|Q9H4A5-2|GOLPH3L', 'ENSG00000143457|ENST00000271732|GOLPH3L'] 57184 6598 LEESQAPLRK True NCI_RA007_Epitope_Rep2 1169.6404363946097 1169.6393299358601 30.273 2 -0.6770323085312019 0.20143962183068329 1.0 ['ENST00000480340.1_1_1:153902104-153902251:-|nuORF'] 137365 14731 YLKISQILT True PC9_epitope_Rep1 1077.6433965167298 1077.6422899358602 61.485 2 -0.6770359256887839 0.20143962183068329 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 123684 18406 VINVTEYA True PC9_epitope_Rep3 907.4650978015899 907.46400993586 76.006 2 -0.6770368582594697 0.20143962183068329 1.0 ['ENSG00000133101|ENST00000255465|CCNA1', 'nc|ENSG00000133101|P78396-2|CCNA1', 'nc|ENSG00000133101|P78396|CCNA1'] 12705 6081 DLFLQRYQFMR True PC9_epitope_Rep1 1515.7656539910697 1515.76399490379 28.205 3 -0.6770531473457531 0.20143962183068329 1.0 ['nc|ENSG00000171004|Q96MM7|HS6ST2', 'ENSG00000171004|ENST00000370833|HS6ST2', 'nc|ENSG00000171004|Q96MM7-2|HS6ST2', 'nc|ENSG00000171004|Q96MM7-3|HS6ST2'] 114347 13068 TSDEKGCQDV True H1975_Epitope_Rep3 1080.43935362956 1080.43824993586 55.508 2 -0.6770608506628287 0.20143962183068329 1.0 ['LTBP2|p.A1391Lfs*100|1|0.24|ENSG00000119681|chr14:74506054-74506054|C/-|frameshift_variant', 'ENSG00000119681|ENST00000261978|LTBP2'] 62582 8310 LLVATHAL True H1975_Epitope_Rep1 836.5119884243601 836.51088993586 36.896 2 -0.6770916060796083 0.20146722531731048 1.0 ['ENSG00000180758|ENST00000377411|GPR157'] 28293 9871 FRWWRRRWNPR True H1975_Epitope_Rep1 1714.9181638542595 1714.9165049037902 42.902 3 -0.6770960851202221 0.20147948064704257 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 39281 18946 HLPKLSITGTY True PC9_epitope_Rep5 1228.6815729306 1228.67992490379 77.899 3 -0.6771090889587743 0.2014855511732478 1.0 ['ENST00000489769.1_1_14:94844788-94846995:-|nuORF', 'ENSG00000197249|ENST00000393087|SERPINA1', 'nc|ENSG00000197249|P01009-2|SERPINA1'] 124384 14482 VLEDSDDP True PC9_epitope_Rep1 888.3712569863999 888.37014993586 60.53 2 -0.6771111283913055 0.2014855511732478 1.0 ['THE1B-int_dup1996|chr7:8345870-8347393:+|1.980991931743807|0.2358979979729452|3.07|487.0|67|2|anti-sense'] 107646 9670 TAIEEHLGKFG True PC9_epitope_Rep2 1200.6138872935999 1200.61278993586 42.533 2 -0.6771203075208351 0.2014855511732478 1.0 ['ENST00000469911.1_1_3:182328694-182329198:+|nuORF'] 73186 9204 NEEKNFHLQPD True H1975_Epitope_Rep1 1369.6262428824498 1369.62514993586 40.31 2 -0.6772878455935475 0.20153765883002886 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-9|CDH23', 'nc|ENSG00000107736|Q9H251-7|CDH23'] 44301 13643 ILYETKTKPD True NCI_RA007_Epitope_Rep5 1206.64960409598 1206.6485099358601 59.161 2 -0.6772985095018367 0.20153765883002886 1.0 ['ENST00000589123.5_2_19:3465565-3466177:+|nuORF'] 68201 13140 LTQKLQEVEI True PC9_epitope_Rep6 1199.6761531969898 1199.6750499358602 62.184 2 -0.677332179013215 0.20153765883002886 1.0 ['ENSG00000152413|ENST00000334082|HOMER1', 'nc|ENSG00000152413|Q86YM7-2|HOMER1'] 43053 6183 IGGSIKTVP True H1975_Epitope_Rep3 870.51746772762 870.51636993586 28.795 2 -0.6773518460694892 0.20154372611904797 1.0 ['ENSG00000088812|ENST00000262919|ATRN'] 4783 12879 ALEISALK True PC9_epitope_Rep2 843.5065686907499 843.50546993586 54.837 2 -0.6773647731715343 0.20154372611904797 1.0 ['ENST00000490918.5_1_6:3138827-3138989:+|nuORF'] 95678 13104 SAVVVQLSV True PC9_epitope_Rep1 900.5280324113199 900.52692993586 55.272 2 -0.6773921876080427 0.20154372611904797 1.0 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1'] 80668 12284 PLPPVPASP True PC9_epitope_Rep2 873.4960040070499 873.49490993586 52.56 2 -0.6774149688092334 0.20155597839430395 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 129512 14659 VTFHLYLI True PC9_epitope_Rep6 1004.5695033004799 1004.56840993586 68.31 2 -0.6774243116320997 0.20156810998250838 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'nc|ENSG00000091592|Q9C000-3|NLRP1', 'nc|ENSG00000091592|Q9C000-4|NLRP1'] 117574 8905 VAGLGSKPLIS True NCI_RA007_Epitope_Rep1 1040.62299542532 1040.62188993586 38.638 2 -0.6774636272098944 0.20156810998250838 1.0 ['nc|ENSG00000112763|Q7KYR7-5|BTN2A1', 'ENSG00000112763|ENST00000312541|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-1|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-6|BTN2A1', 'nc|ENSG00000112763|Q7KYR7-4|BTN2A1'] 45278 10475 ISAAQRQHTR True NCI_RA007_Epitope_Rep1 1166.62685201914 1166.62574993586 44.728 2 -0.6774653005356078 0.20156810998250838 1.0 ['FAM237A|p.P130R|1|0.24|ENSG00000235118|chr2:206644625-206644625|C/G|missense_variant'] 21823 4891 ESDSELEER True PC9_epitope_Rep3 1092.45711186868 1092.45600993586 23.911 2 -0.6774710816964629 0.20156810998250838 1.0 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000575323.1_1_16:3580476-3582910:+|nuORF'] 44121 23737 ILNPINIVVV True PC9_epitope_Rep3 1092.69068106232 1092.68958993586 96.59 2 -0.6775512075648307 0.20156810998250838 1.0 ['ADAMTS15|p.G331Afs*44|1|0.51|ENSG00000166106|chr11:130461521-130461521|G/-|frameshift_variant', 'ADAMTS15|p.A488Hfs*95|1|0.15|ENSG00000166106|chr11:130462697-130462704|TGGGCCGA/-|frameshift_variant', 'ENSG00000166106|ENST00000299164|ADAMTS15'] 69882 9306 LYAVVWPDR True NCI_RA007_Epitope_Rep4 1117.5920296502097 1117.59092993586 42.651 2 -0.6775599345382167 0.20156810998250838 1.0 ['ENST00000464917.5_1_1:12676606-12676750:-|nuORF'] 26568 9780 FIYAWLHDSFR True H1975_Epitope_Rep3 1453.7142700412098 1453.7131699358602 42.641 2 -0.6775764029859823 0.20157417493901222 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 119569 14702 VERHLPVIKL True PC9_epitope_Rep4 1202.7499272739399 1202.7482849037901 64.486 3 -0.6775871549128251 0.20157417493901222 1.0 ['ENST00000358598.6_1_17:66527053-66527110:+|nuORF'] 62327 15937 LLRFYDGICKW True PC9_epitope_Rep5 1412.7274775771998 1412.7258449037902 66.292 3 -0.6775893532120747 0.20157417493901222 1.0 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 80898 21202 PLYLLQFN True NCI_RA007_Epitope_Rep1 1006.5487678559 1006.5481749679301 86.748 1 -0.6776384809684101 0.2016017674675504 1.0 ['nc|ENSG00000174842|Q92990-2|GLMN', 'ENSG00000174842|ENST00000370360|GLMN'] 78317 6472 PASPATAAP True PC9_epitope_Rep1 781.39701824177 781.39592993586 29.7 2 -0.6776598066544838 0.20163542082169925 1.0 ['ENSG00000183770|ENST00000648323|FOXL2'] 137411 14366 YLLQLLSGF True NCI_RA007_Epitope_Rep3 1052.5906326678798 1052.5895299358601 63.819 2 -0.6776632554006999 0.20163542082169925 1.0 ['nc|ENSG00000071967|Q53TN4-3|CYBRD1', 'ENSG00000071967|ENST00000321348|CYBRD1'] 125143 15241 VLPSLLST True NCI_RA007_Epitope_Rep5 828.4956696538801 828.49456993586 65.311 2 -0.677688481507029 0.20163542082169925 1.0 ['ENST00000555923.1_1_14:81955203-81955461:-|nuORF'] 121755 12751 VGLTVRRF True H1975_Epitope_Rep3 946.5712346359799 946.57012993586 54.26 2 -0.6777311418924484 0.20163542082169925 1.0 ['ENST00000475975.5_1_22:30758047-30767232:+|nuORF', 'ENSG00000187860|ENST00000338306|CCDC157'] 12496 5567 DKYVFEKMEEK True NCI_RA007_Epitope_Rep2 1444.69081728496 1444.68916490379 26.27 3 -0.6777896872147049 0.20163838861105146 1.0 ['ENSG00000273559|ENST00000614790|CWC25'] 98121 7735 SIAQDAKVAL True NCI_RA007_Epitope_Rep3 1014.5709598524599 1014.56986993586 37.548 2 -0.6777942144098026 0.20163838861105146 1.0 ['ENSG00000116218|ENST00000367615|NPHS2'] 68456 7236 LTTVKEKA True PC9_epitope_Rep1 888.5280324113198 888.52692993586 32.647 2 -0.6777952710521018 0.20163838861105146 1.0 ['ENSG00000170929|ENST00000641627|OR1M1'] 56000 8067 LDIRNSEY True PC9_epitope_Rep1 1008.48762415132 1008.48652993586 35.854 2 -0.6777953985447611 0.20163838861105146 1.0 ['ENSG00000147724|ENST00000395297|FAM135B', 'nc|ENSG00000147724|Q49AJ0-2|FAM135B', 'ENST00000482951.6_1_8:139144838-139379577:-|nuORF', 'FAM135B|p.E567Dfs*21|1|0.11|ENSG00000147724|chr8:138152774-138152774|T/-|frameshift_variant', 'FAM135B|p.G820Efs*13|1|0.31|ENSG00000147724|chr8:138152016-138152016|C/-|frameshift_variant', 'FAM135B|p.P976Rfs*14|1|0.2|ENSG00000147724|chr8:138151548-138151548|G/-|frameshift_variant', 'FAM135B|p.E1018Rfs*69|1|0.5|ENSG00000147724|chr8:138151423-138151424|-/T|frameshift_variant', 'nc|ENSG00000147724|Q49AJ0-3|FAM135B', 'nc|ENSG00000147724|Q49AJ0-4|FAM135B'] 56692 6037 LEAEIAHSQV True H1975_Epitope_Rep3 1095.55603806431 1095.5549499358601 28.237 2 -0.6780209299601458 0.2016782229858256 1.0 ['nc|ENSG00000096872|Q96LB3-2|IFT74', 'ENSG00000096872|ENST00000380062|IFT74'] 23061 14360 EVLAREDIDE True PC9_epitope_Rep5 1187.56699667083 1187.56588993586 60.237 2 -0.678030478184362 0.2016782229858256 1.0 ['ENSG00000186453|ENST00000295150|FAM228A'] 57707 18124 LENFHSII True PC9_epitope_Rep3 971.5076313199099 971.50652993586 74.913 2 -0.6780762077656638 0.20170271514035895 1.0 ['ENSG00000138617|ENST00000649807|PARP16', 'nc|ENSG00000138617|Q8N5Y8-3|PARP16'] 36932 12836 GVRDYRYTFE True PC9_epitope_Rep4 1304.6149499227597 1304.6138499358601 57.239 2 -0.6780817252184276 0.20170271514035895 1.0 ['STAB2|p.C71Y|1|0.26|ENSG00000136011|chr12:103591027-103591027|G/A|missense_variant'] 66883 12401 LSWLYGNAP True PC9_epitope_Rep2 1019.5076313199099 1019.50652993586 53.009 2 -0.6782531401279454 0.2017763188170146 1.0 ['ENST00000355803.8_1_16:1375125-1375221:+|nuORF'] 62625 9022 LLVPDVAK True NCI_RA007_Epitope_Rep1 853.5273041353299 853.52620993586 39.096 2 -0.6782854607037934 0.20180390231930298 1.0 ['nc|ENSG00000170476|Q8WU39-2|MZB1'] 76600 13777 NTFLNIFRRKK True H1975_Epitope_Rep1 1435.8412018898296 1435.84010993586 58.136 2 -0.6783081663323178 0.20182529335071708 1.0 ['ENSG00000152822|ENST00000282753|GRM1', 'nc|ENSG00000152822|Q13255-2|GRM1', 'nc|ENSG00000152822|Q13255-3|GRM1'] 12914 20360 DLNCVRERW True PC9_epitope_Rep3 1189.56622590853 1189.56512993586 83.563 2 -0.6783122142654372 0.20182529335071708 1.0 ['nc|ENSG00000137177|Q9H1H9-3|KIF13A', 'nc|ENSG00000137177|Q9H1H9-4|KIF13A', 'nc|ENSG00000137177|Q9H1H9-2|KIF13A', 'ENSG00000137177|ENST00000259711|KIF13A'] 106062 19460 SVLTKPACI True PC9_epitope_Rep1 930.5208388558999 930.51974993586 79.669 2 -0.678322565520558 0.20182529335071708 1.0 ['ENST00000533409.1_1_11:59951353-59951413:-|nuORF'] 111382 15536 TLITEQFVADP True H1975_Epitope_Rep2 1232.6288686514 1232.6277699358602 64.913 2 -0.6784358017659544 0.20189888950242346 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 54821 13054 LAFLKKKKKKL True PC9_epitope_Rep3 1343.9380623967897 1343.9369699358601 55.24 2 -0.6784835426406598 0.20191113088025522 1.0 ['ENST00000375664.8_2_10:28908866-28909124:+|nuORF'] 78503 5088 PDGWEEWYQNN True NCI_RA007_Epitope_Rep2 1436.5633082727197 1436.5622099358602 24.417 2 -0.6785573207483462 0.20191717791411043 1.0 ['ENSG00000198393|ENST00000328654|ZNF26'] 105126 10032 STLPKSLSL True PC9_epitope_Rep4 944.55424715916 944.55314993586 46.251 2 -0.6785989035206687 0.20191717791411043 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 2310 3987 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 20.462 2 -0.6786025956716004 0.20191717791411043 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 130093 6154 VTQRRHQP True H1975_Epitope_Rep3 1020.5577098301599 1020.55660993586 28.684 2 -0.6786290821471777 0.2019263212784884 1.0 ['nc|ENSG00000197321|O95425-4|SVIL', 'nc|ENSG00000197321|O95425-3|SVIL', 'ENSG00000197321|ENST00000355867|SVIL'] 66283 6892 LSQFFLCLP True NCI_RA007_Epitope_Rep4 1066.55213898418 1066.5510499358602 33.128 2 -0.6786554983956692 0.2019263212784884 1.0 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 126821 15985 VPSTRRLG True H1975_Epitope_Rep2 884.5191990631199 884.51810993586 66.685 2 -0.6786710947333248 0.20193856110915143 1.0 ['ENST00000289013.10_2_8:144460887-144461499:+|nuORF'] 23224 14859 EVQRFITL True PC9_epitope_Rep6 1004.5654805491998 1004.56438993586 69.13 2 -0.6787033290735702 0.20196613704680694 1.0 ['ENSG00000073067|ENST00000308919|CYP2W1'] 79398 6723 PGLRPSHPP True PC9_epitope_Rep5 956.5191990631199 956.51810993586 30.83 2 -0.6787781915069109 0.2020397208803006 1.0 ['ENSG00000133246|ENST00000423345|PRAM1'] 100587 5369 SLQERWSSWP True PC9_epitope_Rep3 1274.6043852390599 1274.6027249037902 25.727 3 -0.6788110531384977 0.20205799812909261 1.0 ['ENST00000556036.5_2_14:45605535-45605673:+|nuORF'] 20107 8482 ENKEEAERRFK True H1975_Epitope_Rep3 1434.7215402496197 1434.7204499358602 37.611 2 -0.678813171253826 0.20205799812909261 1.0 ['nc|ENSG00000293135|Q8WWF6|DNAJB3'] 45362 14126 ISDHYPVEV True PC9_epitope_Rep4 1057.50802524273 1057.5069299358602 62.24 2 -0.678825836609821 0.20205799812909261 1.0 ['ENSG00000013563|ENST00000369807|DNASE1L1', 'ENSG00000213918|ENST00000246949|DNASE1'] 88098 6775 QVVTGNVP True H1975_Epitope_Rep3 812.4392174069199 812.43812993586 31.016 2 -0.6788346793041938 0.20205799812909261 1.0 ['ENSG00000167210|ENST00000642948|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF'] 121300 4514 VGHLRVRRFWS True H1975_Epitope_Rep1 1411.79492040375 1411.79326490379 22.385 3 -0.6788993561104644 0.20210090476920717 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 33322 11393 GLDPPGRRRFQ True H1975_Epitope_Rep1 1297.7003513125699 1297.69924993586 48.802 2 -0.6789378800900265 0.20212537569772435 1.0 ['ENST00000564349.5_1_16:20907668-20911664:-|nuORF', 'ENST00000324344.8_1_16:20873882-20911664:-|nuORF'] 16902 17661 EGALTLAVQ True PC9_epitope_Rep4 900.4916469026 900.49109496793 75.959 1 -0.6789432414267483 0.20212537569772435 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'ENST00000483412.5_1_9:123169248-123169542:-|nuORF'] 111803 5948 TLRERLRHWQS True PC9_epitope_Rep2 1480.801127983 1480.79947490379 28.269 3 -0.6789655723004929 0.20213761059911367 1.0 ['ENST00000392088.6_1_2:220119039-220119258:-|nuORF'] 110520 17562 TIQSDKFLN True PC9_epitope_Rep4 1064.5502244078798 1064.54912993586 75.57 2 -0.6789976785239464 0.20216207927624014 1.0 ['ENSG00000136052|ENST00000258538|SLC41A2'] 111198 9760 TLFNPFLLS True H1975_Epitope_Rep3 1050.57498260374 1050.57388993586 42.565 2 -0.6790029842554434 0.20216207927624014 1.0 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'ENSG00000100106|ENST00000644935|TRIOBP'] 4495 8022 AKKKKKKKKG True NCI_RA007_Epitope_Rep5 1170.8288463009796 1170.82720490379 37.547 3 -0.6791057411656245 0.20217431305201178 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 17129 6220 EGTPLKQAPE True NCI_RA007_Epitope_Rep1 1068.54513902744 1068.5440499358601 28.23 2 -0.6791462135309706 0.20221721330327982 1.0 ['ENST00000304834.11_1_17:73143658-73143733:-|nuORF'] 112003 12448 TLSQSLLLDI True PC9_epitope_Rep1 1101.6281403754099 1101.6270499358602 52.746 2 -0.6791810650855923 0.20222944585850533 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO'] 66232 6516 LSPTGVLDQK True NCI_RA007_Epitope_Rep2 1056.5815245361598 1056.5804299358601 29.956 2 -0.6792304558811795 0.20223857712358173 1.0 ['ENSG00000076356|ENST00000367033|PLXNA2'] 100188 9489 SLLGKTILP True H1975_Epitope_Rep1 940.5957180483199 940.59462993586 41.419 2 -0.679282448484547 0.20223857712358173 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'nc|ENSG00000091592|Q9C000-3|NLRP1', 'nc|ENSG00000091592|Q9C000-4|NLRP1', 'ENST00000571307.1_1_17:5433304-5487319:-|nuORF'] 126555 9550 VPPGNGNI True PC9_epitope_Rep1 766.39735259494 766.3962499358599 41.591 2 -0.6793266644155653 0.20226304007850113 1.0 ['nc|ENSG00000107897|Q5T8D3-4|ACBD5', 'nc|ENSG00000107897|Q5T8D3-2|ACBD5', 'ENSG00000107897|ENST00000396271|ACBD5', 'nc|ENSG00000107897|Q5T8D3|ACBD5'] 58680 19012 LFIENNNI True PC9_epitope_Rep1 975.50254593947 975.50144993586 77.918 2 -0.6793351612936269 0.20226304007850113 1.0 ['nc|ENSG00000108231|O95970-2|LGI1', 'ENSG00000108231|ENST00000371418|LGI1'] 30720 7080 GALVARAAVLQ True NCI_RA007_Epitope_Rep4 1067.6451278522297 1067.64402993586 33.857 2 -0.6793431395861981 0.20227527099336123 1.0 ['ENSG00000258839|ENST00000555147|MC1R'] 115509 14607 TVGLIFVVP True PC9_epitope_Rep3 943.5742543277499 943.57314993586 61.317 2 -0.6794166325080001 0.2022781976788753 1.0 ['nc|ENSG00000220721|Q8NHA8|OR1F12P'] 23779 8346 EYKNNYYGTSI True NCI_RA007_Epitope_Rep1 1350.6091958359798 1350.60808993586 36.464 2 -0.6794207940512931 0.2022781976788753 1.0 ['ENSG00000150054|ENST00000683449|MPP7', 'nc|ENSG00000150054|Q5T2T1-2|MPP7', 'ENST00000496637.6_1_10:28342996-28348461:-|nuORF'] 31845 6810 GEPEAPEPP True H1975_Epitope_Rep3 921.4079768482899 921.4074249679301 31.148 1 -0.6794215763217321 0.2022781976788753 1.0 ['nc|ENSG00000105732|Q6ZN55-2|ZNF574', 'ENSG00000105732|ENST00000359044|ZNF574'] 135761 10331 YEMYVSILK True PC9_epitope_Rep6 1144.58383303528 1144.58272993586 50.437 2 -0.6794241461776375 0.2022781976788753 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 77831 13007 PAGAIAPLG True PC9_epitope_Rep4 765.43848913093 765.4379449679301 57.926 1 -0.6794941049609899 0.20232108910283927 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 78490 8834 PDERSLYIM True PC9_epitope_Rep5 1122.5379454720198 1122.5362949037901 38.926 3 -0.6795164421511356 0.20234244454323863 1.0 ['ENSG00000177519|ENST00000325926|RPRM'] 31447 8906 GEDVAVKIFSS True H1975_Epitope_Rep3 1150.58700383942 1150.5859099358602 39.256 2 -0.6795200406508239 0.20234244454323863 1.0 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C'] 28590 15857 FSPDRTLLA True PC9_epitope_Rep3 1018.54474510462 1018.54364993586 66.144 2 -0.6795216324198279 0.20234244454323863 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'AMBRA1|p.W132Cfs*22|1|0.22|ENSG00000110497|chr11:46545759-46545759|C/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1'] 45967 6282 ISSSLTPQ True NCI_RA007_Epitope_Rep5 831.43379767331 831.43270993586 30.842 2 -0.6795893724512349 0.20236690018855488 1.0 ['ENSG00000168916|ENST00000513986|ZNF608', 'ENST00000503896.6_1_5:123979291-124080034:-|nuORF'] 66233 11574 LSPTIPRQ True PC9_epitope_Rep1 910.5236157372199 910.52250993586 49.398 2 -0.6796207911921296 0.20236690018855488 1.0 ['ENSG00000196453|ENST00000247930|ZNF777'] 17653 9933 EHREVRHTY True PC9_epitope_Rep4 1225.59521753769 1225.59358490379 45.859 3 -0.6796911215391943 0.20238825188546203 1.0 ['ENST00000476203.2_1_1:78269082-78324778:+|nuORF', 'nc|ENSG00000180488|Q8NAN2-2|MIGA1', 'ENSG00000180488|ENST00000370791|MIGA1', 'nc|ENSG00000180488|Q8NAN2|MIGA1'] 63439 21656 LPGTLTLVT True PC9_epitope_Rep2 913.54843350273 913.54788496793 88.775 1 -0.6797399678815099 0.20238825188546203 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF', 'ENST00000561695.1_1_16:2128976-2129273:+|nuORF'] 10873 6577 DANVFITLFGE True NCI_RA007_Epitope_Rep2 1224.60265390356 1224.60154993586 30.195 2 -0.679742832472597 0.20238825188546203 1.0 ['ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1'] 41319 5002 IAKASVQDFEK True NCI_RA007_Epitope_Rep5 1234.65575210558 1234.65409490379 25.945 3 -0.6797564772458738 0.20239737576259234 1.0 ['nc|ENSG00000156469|Q96E29-3|MTERF3', 'nc|ENSG00000156469|Q96E29-2|MTERF3', 'ENSG00000156469|ENST00000287025|MTERF3', 'ENST00000523821.5_1_8:97251721-97252051:-|nuORF'] 109874 9461 THMTAIVGM-[Oxidation] True PC9_epitope_Rep5 975.4517737003499 975.45066993586 41.347 2 -0.6797565875078622 0.20239737576259234 1.0 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 15217 7537 EAFRQKAEL True NCI_RA007_Epitope_Rep5 1090.5771078620598 1090.5760099358602 35.677 2 -0.6797681832605285 0.20240923232539962 1.0 ['ENSG00000139437|ENST00000405876|TCHP'] 33059 13197 GKDVLILGGG True PC9_epitope_Rep5 927.5389314481898 927.53782993586 55.769 2 -0.6798082425200213 0.20240923232539962 1.0 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS'] 137377 15570 YLKLMPMF True NCI_RA007_Epitope_Rep4 1041.53913177233 1041.53802993586 67.639 2 -0.6798255535715042 0.20240923232539962 1.0 ['nc|ENSG00000100170|P13866-2|SLC5A1', 'ENSG00000100170|ENST00000266088|SLC5A1'] 111069 3885 TLDYQDTTVHK True NCI_RA007_Epitope_Rep2 1319.63574493699 1319.63410490379 19.748 3 -0.6798305894473935 0.20240923232539962 1.0 ['ENSG00000152705|ENST00000282611|CATSPER3'] 124177 11449 VLADELSPIK True NCI_RA007_Epitope_Rep5 1083.6175756917098 1083.61646993586 50.687 2 -0.6798573948956456 0.20240923232539962 1.0 ['nc|ENSG00000136449|Q8TBZ2|MYCBPAP', 'ENSG00000136449|ENST00000323776|MYCBPAP'] 82751 18169 PVQIYIGLLQ True PC9_epitope_Rep5 1142.6699456177398 1142.6688499358602 74.896 2 -0.6798574455174589 0.20240923232539962 1.0 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 20770 9763 EQLQAWRWER True NCI_RA007_Epitope_Rep2 1400.69493157896 1400.69382993586 42.596 2 -0.6798823015262458 0.20240923232539962 1.0 ['ENSG00000115524|ENST00000335508|SF3B1', 'ENST00000468925.1_1_2:198272706-198273336:-|nuORF'] 47310 21032 IYGEGFQTW True PC9_epitope_Rep5 1099.4974605590298 1099.49687496793 85.958 1 -0.6798912344845135 0.20240923232539962 1.0 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9'] 3030 6969 AFTKENLRAPG True NCI_RA007_Epitope_Rep5 1202.64077074778 1202.6396699358602 33.489 2 -0.6799484988222263 0.20240923232539962 1.0 ['CON__ENSEMBL:ENSBTAP00000031900'] 112350 11427 TMVPNQVSL True PC9_epitope_Rep3 987.5059170677499 987.50480993586 48.953 2 -0.6799486243991821 0.20240923232539962 1.0 ['nc|ENSG00000080298|P48380-2|RFX3'] 65577 13135 LSGGVVVSAI True PC9_epitope_Rep5 900.5280324113199 900.52692993586 55.527 2 -0.6799556893020824 0.20240923232539962 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF'] 34197 3517 GPGVPPKR True NCI_RA007_Epitope_Rep2 806.47627162198 806.47516993586 18.33 2 -0.6800722822955052 0.20242145593869731 1.0 ['ENSG00000062822|ENST00000440232|POLD1', 'ENST00000600746.1_1_19:50902108-50905775:+|nuORF'] 123806 25365 VITLTELTLI True PC9_epitope_Rep2 1114.68492697554 1114.68382993586 103.25 2 -0.6800863571950273 0.20243367917733063 1.0 ['ENST00000374721.7_1_10:35500449-35500728:+|nuORF'] 114638 2607 TSPISVTK True NCI_RA007_Epitope_Rep5 831.47018318203 831.46908993586 14.734 2 -0.6801392105986945 0.20244590204131674 1.0 ['ENSG00000159592|ENST00000355105|GPBP1L1'] 80780 8445 PLSPHASGSL True PC9_epitope_Rep5 964.4977949122 964.49668993586 37.426 2 -0.6801983196182411 0.20245793619173127 1.0 ['ENSG00000170689|ENST00000311177|HOXB9'] 91372 20606 RMSCSPCLLPA True NCI_RA007_Epitope_Rep5 1176.54535643492 1176.54370490379 86.202 3 -0.680228326004275 0.20245793619173127 1.0 ['ENST00000531828.5_2_1:52195717-52211230:+|nuORF'] 108407 7593 TEEDLEFY True H1975_Epitope_Rep2 1044.4287718625199 1044.4276699358602 34.158 2 -0.6802547684342864 0.20245793619173127 1.0 ['ENST00000471199.1_1_20:42271018-42275620:+|nuORF', 'ENSG00000101052|ENST00000373030|IFT52'] 85856 8635 QNEYEEFHFRR True NCI_RA007_Epitope_Rep2 1553.7011391582098 1553.70004993586 38.233 2 -0.6802706009736741 0.20245793619173127 1.0 ['ENST00000282030.5_1_18:42645023-42645323:+|nuORF'] 132693 9681 VYSEAARVLQ True PC9_epitope_Rep3 1134.6033226098998 1134.6022299358601 42.186 2 -0.6802769209048143 0.20245793619173127 1.0 ['nc|ENSG00000156958|Q01415-2|GALK2', 'ENSG00000156958|ENST00000560031|GALK2', 'ENST00000560119.5_1_15:49584731-49620353:+|nuORF'] 18996 12887 ELGEKLSPLP True PC9_epitope_Rep1 1081.60192562757 1081.60082993586 54.444 2 -0.6802846198717892 0.20245793619173127 1.0 ['ENSG00000166886|ENST00000300131|NAB2', 'nc|ENSG00000166886|Q15742-3|NAB2', 'nc|ENSG00000166886|Q15742-2|NAB2'] 13610 14904 DPSLLHLLY True H1975_Epitope_Rep2 1069.58079626017 1069.5796899358602 62.482 2 -0.6803008860128607 0.2024701573729294 1.0 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 115663 18694 TVKNIQGKVP True PC9_epitope_Rep6 1082.64479349906 1082.64368993586 84.549 2 -0.6803184163843359 0.20248237817958933 1.0 ['nc|ENSG00000157429|P17023-2|ZNF19', 'ENSG00000157429|ENST00000288177|ZNF19'] 52394 12884 KPGKPRKRKKR True NCI_RA007_Epitope_Rep4 1377.9157042427698 1377.91405490379 56.646 3 -0.6804072699682895 0.20250371573479614 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 29011 18120 FTIRDLQRL True PC9_epitope_Rep4 1160.6665915728 1160.66494490379 77.763 3 -0.6804130154594049 0.20250371573479614 1.0 ['ENSG00000149262|ENST00000534064|INTS4', 'ENST00000533180.1_1_11:77612465-77632469:-|nuORF'] 26573 22099 FIYYQSFQKH True PC9_epitope_Rep5 1359.66117183919 1359.66006993586 90.036 2 -0.6804164264203191 0.20250371573479614 1.0 ['ENSG00000105708|ENST00000344099|ZNF14'] 45127 7435 IQVLELPG True H1975_Epitope_Rep3 867.5065686907499 867.50546993586 33.577 2 -0.6804871634864751 0.20251593527825448 1.0 ['ENSG00000166450|ENST00000389286|PRTG'] 126975 12271 VPVTTDAMP True H1975_Epitope_Rep2 929.4528188657299 929.4522749679301 52.283 1 -0.6805151381526913 0.2025281544472535 1.0 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 138278 10252 YQYHWQSH True PC9_epitope_Rep2 1147.48354183039 1147.4818949037901 44.767 3 -0.6805401334129182 0.20254948826377397 1.0 ['ENSG00000157483|ENST00000288235|MYO1E', 'ENST00000558646.1_1_15:59564474-59664765:-|nuORF'] 36334 6391 GVGYYSHEVGR True NCI_RA007_Epitope_Rep1 1222.5730851107799 1222.57198993586 28.884 2 -0.6805451358080298 0.20254948826377397 1.0 ['ENSG00000160111|ENST00000443236|CPAMD8', 'nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'CPAMD8|p.V1154Sfs*25|1|0.33|ENSG00000160111|chr19:16928060-16928060|C/-|frameshift_variant'] 65791 14591 LSITMGCTAL True H1975_Epitope_Rep3 1008.49838915916 1008.49728993586 61.493 2 -0.6805730439359892 0.20254948826377397 1.0 ['nc|ENSG00000157703|Q8N434-2|SVOPL', 'ENSG00000157703|ENST00000674285|SVOPL'] 126953 10656 VPVPHTTALS True PC9_epitope_Rep5 1020.56039516876 1020.55928993586 45.977 2 -0.680595252338698 0.20255860272713344 1.0 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 131389 16741 VVSSLLLLT True NCI_RA007_Epitope_Rep4 943.5953836951501 943.59428993586 72.576 2 -0.6806048261141417 0.20255860272713344 1.0 ['PCDHA11|p.V711L|1|0.36|ENSG00000249158|chr5:140871234-140871234|G/C|missense_variant'] 14913 18089 DYKGDATVFFI True PC9_epitope_Rep6 1274.6183039676998 1274.61720993586 82.216 2 -0.6806760525610072 0.20258614085888066 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 61149 14765 LLDEVFFSEK True NCI_RA007_Epitope_Rep1 1225.6230549949698 1225.6219499358601 61.49 2 -0.6807415780507472 0.20261057405052624 1.0 ['ENST00000560033.5_1_15:78834730-78834988:+|nuORF', 'ENST00000557929.5_1_15:78834269-78838932:+|nuORF', 'ENSG00000041357|ENST00000044462|PSMA4'] 115904 10858 TVPIQNQKYVP True NCI_RA007_Epitope_Rep1 1285.70303665117 1285.70192993586 46.226 2 -0.6807477692318175 0.20261057405052624 1.0 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 23109 12354 EVLRSQLV True PC9_epitope_Rep2 942.5498304850599 942.54872993586 52.83 2 -0.6807933305791583 0.2026441166107511 1.0 ['ENST00000593411.1_1_19:17213013-17214246:+|nuORF'] 69567 8666 LVTLEGIVT True NCI_RA007_Epitope_Rep5 943.55899818643 943.5584449679301 40.004 1 -0.6807979029463914 0.2026441166107511 1.0 ['ENST00000534988.1_1_11:63996737-63997202:-|nuORF'] 101987 8834 SPNKKAHPNM True PC9_epitope_Rep5 1122.5604122520997 1122.55876490379 38.926 3 -0.6808108578935296 0.2026441166107511 1.0 ['ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'CASP4|p.R121Sfs*2|1|0.24|ENSG00000196954|chr11:104951907-104951908|TT/-|frameshift_variant', 'nc|ENSG00000196954|P49662-5|CASP4', 'ENST00000531546.1_1_11:104822523-104839261:-|nuORF'] 108626 6819 TEKETSLEETK True NCI_RA007_Epitope_Rep2 1293.6299908502099 1293.6288899358601 31.139 2 -0.6808660795707456 0.2026441166107511 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 123376 17709 VICLMFYAL True PC9_epitope_Rep4 1071.54969645603 1071.54858993586 76.142 2 -0.6809367445504423 0.20268386464253435 1.0 ['TMEM140|p.R177Gfs*2|1|0.09|ENSG00000146859|chr7:135164967-135164968|GA/-|frameshift_variant', 'ENSG00000146859|ENST00000275767|TMEM140'] 115555 8333 TVHRRSHLEEK True H1975_Epitope_Rep1 1390.74294440054 1390.74184993586 36.984 2 -0.6809457031462299 0.20268386464253435 1.0 ['ENSG00000146587|ENST00000396912|RBAK'] 52867 23789 KRELKKKRNLQ True H1975_Epitope_Rep2 1439.9048647755496 1439.90320490379 98.01 3 -0.6809832901513638 0.20269607843137255 1.0 ['ENST00000395603.7_1_X:76937740-76937824:-|nuORF'] 128025 23617 VRRGKKRVK True NCI_RA007_Epitope_Rep3 1125.75707834305 1125.75657496793 102.43 1 -0.6810196963991403 0.20272361023881375 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 113954 3251 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 18.56 3 -0.6810810279474602 0.2027358230446371 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 21051 11240 ERDLVTRPD True PC9_epitope_Rep4 1099.56218607391 1099.56108993586 51.009 2 -0.6811497698468367 0.20280930717032 1.0 ['IRX1|p.P443T|1|0.31|ENSG00000170549|chr5:3600623-3600623|C/A|missense_variant'] 66686 10910 LSTCDGQNPP True PC9_epitope_Rep3 1030.4389597067398 1030.4378699358601 46.946 2 -0.6811654716240497 0.20282151828932052 1.0 ['ENSG00000186416|ENST00000688521|NKRF', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 88174 16111 QWTSRKRK True NCI_RA007_Epitope_Rep4 1088.6203100867199 1088.61920993586 69.87 2 -0.681264078411867 0.20284904648847363 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 64903 6553 LSAVGTFTWVC True NCI_RA007_Epitope_Rep1 1182.57433098074 1182.5732299358601 29.504 2 -0.681364236581098 0.20286125662469748 1.0 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant', 'ENST00000574224.1_1_16:16108407-16150188:+|nuORF'] 16335 8703 EEKIATFSLSE True H1975_Epitope_Rep1 1252.61869789052 1252.6176099358602 38.402 2 -0.6814015406797124 0.2028734663868764 1.0 ['ENSG00000204290|ENST00000454136|BTNL2', 'nc|ENSG00000204290|Q9UIR0-2|BTNL2'] 54993 11055 LAIQVKLTVAP True NCI_RA007_Epitope_Rep1 1151.7277948470298 1151.7266899358601 46.998 2 -0.6814355102259044 0.20290099252542582 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 56934 6874 LEDSLQAQ True H1975_Epitope_Rep3 902.4345259493 902.43342993586 31.4 2 -0.6814653704068344 0.20293140152849462 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 106712 3515 SYCFKEKKCKK True NCI_RA007_Epitope_Rep1 1390.7101132608998 1390.70845490379 17.595 3 -0.6814677199489727 0.20293140152849462 1.0 ['nc|ENSG00000196159|Q6V0I7-2|FAT4'] 65158 15650 LSDSVVYLL True NCI_RA007_Epitope_Rep4 1007.55391280599 1007.55337496793 67.974 1 -0.6814688707268871 0.20293140152849462 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 37785 16228 HCAEDDSI True PC9_epitope_Rep5 888.3283466286 888.32724993586 67.41 2 -0.6814718511506114 0.20293140152849462 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 59382 10737 LGLGNQSPSL True PC9_epitope_Rep2 984.5240096600401 984.52290993586 46.619 2 -0.6815726544378652 0.20293140152849462 1.0 ['ENST00000559184.5_1_15:47477943-47533566:+|nuORF'] 114996 16691 TTKSTVNKWTL True PC9_epitope_Rep1 1277.6979512707298 1277.6968499358602 69.029 2 -0.6816003965370461 0.2029742395932245 1.0 ['nc|ENSG00000114742|Q8TAF3-3|WDR48', 'ENSG00000114742|ENST00000302313|WDR48', 'nc|ENSG00000114742|Q8TAF3-4|WDR48'] 64487 7949 LQVNKVMSILF True H1975_Epitope_Rep1 1290.73697963174 1290.73588993586 35.523 2 -0.6816162751108973 0.20298644612910635 1.0 ['ENSG00000185652|ENST00000423158|NTF3'] 85889 9203 QNKSIQSL True PC9_epitope_Rep1 916.4977949121999 916.49668993586 40.249 2 -0.681699128463399 0.20304459691252144 1.0 ['ENSG00000169683|ENST00000306688|LRRC45'] 129843 18288 VTLICHAP True NCI_RA007_Epitope_Rep5 852.45275929608 852.45166993586 77.145 2 -0.6817523202101753 0.20307499119462183 1.0 ['ENST00000487143.5_1_2:168811849-168812002:-|nuORF'] 121265 21980 VGGVMTKLI True PC9_epitope_Rep5 916.54157430048 916.54046993586 89.578 2 -0.6817776714857409 0.20307499119462183 1.0 ['ENSG00000044574|ENST00000324460|HSPA5', 'ENST00000442006.2_1_1:39175842-39176013:+|nuORF'] 133620 1025 WKERILKAK True NCI_RA007_Epitope_Rep1 1170.7237125260997 1170.7220549037902 5.4302 3 -0.6817779672611785 0.20307499119462183 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 80215 24351 PLALMQTPLP True PC9_epitope_Rep3 1079.60490283303 1079.60437496793 98.979 1 -0.6818000727607881 0.20307499119462183 1.0 ['MSN-HTR3D|1|fusion', 'nc|ENSG00000186090|Q70Z44|HTR3D'] 140187 18241 YVVGQALQL True PC9_epitope_Rep2 989.5545815123298 989.55348993586 75.483 2 -0.6818193105652418 0.20307499119462183 1.0 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 5526 7078 ANEMFRIFS True PC9_epitope_Rep6 1113.5277151414898 1113.52660993586 36.259 2 -0.681856789700401 0.20308719487917676 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 32203 20480 GFGEEMVKEI True PC9_epitope_Rep2 1137.53761111885 1137.53650993586 84.208 2 -0.6818688941432856 0.2030962881293642 1.0 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD'] 21965 17627 ESLMLFDSI True PC9_epitope_Rep5 1053.50524836141 1053.5041499358601 72.813 2 -0.6818772274463235 0.2030962881293642 1.0 ['ENSG00000087258|ENST00000262493|GNAO1'] 69583 8841 LVTVALSLST True PC9_epitope_Rep5 1002.5961119711401 1002.59500993586 38.95 2 -0.6819635598007173 0.20310538082258905 1.0 ['nc|ENSG00000092969|P61812-2|TGFB2', 'ENSG00000092969|ENST00000366930|TGFB2', 'TGFB2|p.V189Afs*14|1|0.17|ENSG00000092969|chr1:218434137-218434141|TTGTG/C|frameshift_variant', 'TGFB2|p.N274Tfs*10|1|0.14|ENSG00000092969|chr1:218436029-218436029|A/-|frameshift_variant', 'TGFB2|p.N274Kfs*19|1|0.28|ENSG00000092969|chr1:218436028-218436029|-/A|frameshift_variant'] 16922 9186 EGDLVKKESF True NCI_RA007_Epitope_Rep2 1150.5870038394198 1150.5859099358602 40.339 2 -0.6819816982807947 0.20310538082258905 1.0 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-3|ARHGAP17'] 123881 16100 VKEQQRQKEQK True NCI_RA007_Epitope_Rep1 1427.78447485935 1427.78336993586 66.731 2 -0.6821280375602885 0.20312667473089466 1.0 ['ENSG00000149548|ENST00000344762|CCDC15'] 51813 25174 KKKKKQHKIPT True PC9_epitope_Rep1 1362.8823384258196 1362.88069490379 101.72 3 -0.6821620539672724 0.20312667473089466 1.0 ['ENSG00000129518|ENST00000250454|EAPP'] 68399 11484 LTSVPGAAA True PC9_epitope_Rep5 785.42831837005 785.4272299358599 49.171 2 -0.6821640264149684 0.20312667473089466 1.0 ['ENST00000482818.1_1_22:29724812-29725148:-|nuORF'] 115946 12582 TVPRRWFCP True H1975_Epitope_Rep1 1160.59131845756 1160.5902299358602 53.445 2 -0.6822224558824977 0.20319701122322426 1.0 ['ENST00000455810.5_1_10:6624113-6625881:+|nuORF'] 68219 17518 LTQMLRALAT True PC9_epitope_Rep1 1116.6325145631997 1116.6314099358601 72.177 2 -0.6822694420483572 0.20319701122322426 1.0 ['nc|ENSG00000288640|O00458-2|IFRD1', 'ENSG00000006652|ENST00000403825|IFRD1', 'ENST00000489994.5_1_7:112107978-112115571:+|nuORF'] 136226 4685 YGNSLSAILE True NCI_RA007_Epitope_Rep2 1065.53423999057 1065.5331499358601 22.851 2 -0.6822770006954899 0.2032092111709946 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 13373 6648 DNEIELKKI True NCI_RA007_Epitope_Rep2 1100.607739284 1100.60664993586 30.469 2 -0.6823458488879188 0.20324892059895275 1.0 ['ENSG00000155096|ENST00000337198|AZIN1', 'ENST00000522311.1_1_8:103848756-103855898:-|nuORF'] 110513 12926 TIQNDILKEF True PC9_epitope_Rep3 1219.6448530687096 1219.64320490379 54.744 3 -0.6823899153920517 0.20324892059895275 1.0 ['ENSG00000146085|ENST00000274813|MMUT'] 115326 19420 TVDWDEWKYYF True PC9_epitope_Rep3 1550.67179609254 1550.67068993586 79.925 2 -0.682434942683338 0.20327642961034983 1.0 ['ENST00000411846.6_1_1:108815923-108880006:+|nuORF'] 101251 19878 SLWIRFGYDP True PC9_epitope_Rep2 1252.6240580544797 1252.62296993586 81.854 2 -0.6825119543576171 0.20328862759507624 1.0 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5'] 63418 24820 LPGLFLLQQL True PC9_epitope_Rep1 1140.69068106232 1140.6890249037901 100.37 3 -0.6825723913023958 0.20330082520630158 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'ENST00000580882.5_1_17:26966325-26972074:-|nuORF', 'ENST00000579253.1_1_17:26967576-26969063:-|nuORF', 'nc|ENSG00000007202|Q14667-4|BLTP2', 'ENST00000577417.5_1_17:26966838-26970337:-|nuORF', 'KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion'] 85444 15896 QLFPPPPGTSL True PC9_epitope_Rep5 1152.6179100448799 1152.6168099358601 66.134 2 -0.6826391343161504 0.20334364187513396 1.0 ['nc|ENSG00000205696|A8MUL3|ADARB2-AS1'] 58306 24921 LETLFRIRTI True PC9_epitope_Rep3 1260.7554065772 1260.75376490379 101.22 3 -0.6826923276768033 0.2034108479661977 1.0 ['KIRREL-CD1A|1|fusion', 'ENSG00000158477|ENST00000289429|CD1A'] 134723 12230 WWRWWEHRLLW True NCI_RA007_Epitope_Rep1 1752.8789843808797 1752.87733490379 51.541 3 -0.6826981270647166 0.2034108479661977 1.0 ['ENST00000563368.5_1_15:75650962-75652298:-|nuORF', 'ENST00000564785.5_1_15:75650962-75651301:-|nuORF'] 118712 17698 VECSEQKAPP True PC9_epitope_Rep1 1086.5015599632998 1086.50046993586 72.87 2 -0.6827216608772219 0.2034108479661977 1.0 ['ENSG00000177238|ENST00000322122|TRIM72'] 96580 17576 SELRPVTIV True PC9_epitope_Rep5 1012.5916952970399 1012.59058993586 72.615 2 -0.6827547152319361 0.20341992866218636 1.0 ['ENSG00000143199|ENST00000367851|ADCY10', 'nc|ENSG00000143199|Q96PN6-4|ADCY10', 'nc|ENSG00000143199|Q96PN6-2|ADCY10'] 133722 24385 WLKKILLLL True H1975_Epitope_Rep3 1138.7841875243398 1138.78308993586 101.52 2 -0.6827591479900295 0.20341992866218636 1.0 ['ENST00000433031.1_1_7:57216973-57217525:-|nuORF'] 2308 3815 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 19.769 2 -0.6827670556089254 0.2034321229563407 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 113337 21091 TQKQALDSLP True PC9_epitope_Rep1 1099.5873381925899 1099.58624993586 85.956 2 -0.6828672619114802 0.20346870359881825 1.0 ['ENST00000456291.1_3_9:123638279-123638699:-|nuORF'] 90123 7423 RGRRWRRRRDR True NCI_RA007_Epitope_Rep5 1624.9471725667597 1624.9460699358601 35.23 2 -0.6829373210861924 0.20346870359881825 1.0 ['ENST00000425427.6_1_5:153570544-153674427:+|nuORF'] 82342 16239 PTSVAIASI True PC9_epitope_Rep1 857.48583324617 857.48528496793 67.281 1 -0.6829426452414745 0.20346870359881825 1.0 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF'] 78621 13974 PDTFVSLSY True NCI_RA007_Epitope_Rep4 1027.48622716899 1027.48567496793 61.024 1 -0.6829550881465846 0.20347778168960187 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 14503 8769 DTWESLQK True PC9_epitope_Rep5 1005.47672511445 1005.4761749679301 38.672 1 -0.6829709533788569 0.20347778168960187 1.0 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 106132 13592 SVNVKTQAL True PC9_epitope_Rep2 958.5447451046199 958.54364993586 57.571 2 -0.6830235689047066 0.2034806300032143 1.0 ['ENSG00000159147|ENST00000303071|DONSON'] 24976 2896 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 16.216 2 -0.6830586103933576 0.2034806300032143 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 134076 22824 WQPWWWWIWWQ True PC9_epitope_Rep3 1786.8197381692598 1786.81864993586 93.063 2 -0.6830903416814429 0.2034806300032143 1.0 ['chr12:54282841-54283827|502|22.89|0.0|21.13|+|1|HNRNPA1,HNRNPA1|1'] 110314 6671 TIIGNVVI True H1975_Epitope_Rep2 827.51165407119 827.51054993586 30.569 2 -0.6830903706634507 0.2034806300032143 1.0 ['ENSG00000197591|ENST00000355784|OR11L1'] 129938 9495 VTMTVAWRSLR True H1975_Epitope_Rep3 1318.7179755226598 1318.7168699358601 41.528 2 -0.6831106978185599 0.20348659238398434 1.0 ['PCDH1|p.K1028Nfs*7|1|0.24|ENSG00000156453|chr5:141863250-141863250|G/-|frameshift_variant'] 22697 5677 ETVHQLSKT True H1975_Epitope_Rep3 1041.54547338061 1041.54436993586 26.865 2 -0.6831189836442518 0.20348659238398434 1.0 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 137890 6626 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.3921149679301 30.898 1 -0.6831194966473105 0.20348659238398434 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 90567 23683 RKGKKKKRWH True NCI_RA007_Epitope_Rep4 1350.8472903297798 1350.8461899358601 102.71 2 -0.6831712949721095 0.20349255421723625 1.0 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 64501 12370 LQYLERLYMKR True NCI_RA007_Epitope_Rep2 1511.8282542476297 1511.82714993586 52.721 2 -0.6831734014020496 0.20349255421723625 1.0 ['ENST00000560213.1_1_15:99796138-99796378:+|nuORF', 'ENST00000558500.5_1_15:99796138-99837514:+|nuORF', 'nc|ENSG00000168904|Q86X40-2|LRRC28', 'LRRC28|p.A339Qfs*28|1|0.26|ENSG00000168904|chr15:99363248-99363248|G/-|frameshift_variant', 'ENSG00000168904|ENST00000301981|LRRC28'] 97881 8217 SHLNQSPASL True PC9_epitope_Rep2 1052.5250722892001 1052.5239699358601 36.964 2 -0.6831911169955142 0.20349255421723625 1.0 ['nc|ENSG00000165588|P32243|OTX2', 'chr14:56804339-56805360|148|11.56|0.49|4.56|-|ENST00000673035|OTX2,OTX2', 'ENSG00000165588|ENST00000672264|OTX2'] 5141 7920 ALNHHIHSVKT True H1975_Epitope_Rep3 1255.6785532388299 1255.67744993586 35.433 2 -0.683288370940851 0.20356596265687174 1.0 ['nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1', 'nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1'] 3557 9650 AGNKVGSSFP True NCI_RA007_Epitope_Rep4 962.4821448480599 962.48104993586 43.97 2 -0.6832919561291056 0.20356880509304603 1.0 ['nc|ENSG00000185436|Q8IU57-3|IFNLR1'] 68335 7363 LTSDCCQDLAS True H1975_Epitope_Rep2 1154.45837482198 1154.45726993586 33.262 2 -0.683330541444896 0.20356880509304603 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'nc|ENSG00000091592|Q9C000-3|NLRP1', 'nc|ENSG00000091592|Q9C000-4|NLRP1', 'ENST00000571307.1_1_17:5433304-5487319:-|nuORF'] 64747 21574 LRRLQRQQQVS True NCI_RA007_Epitope_Rep5 1410.8167780471401 1410.81514490379 90.071 3 -0.6833329402185981 0.20356880509304603 1.0 ['ENSG00000135973|ENST00000258456|GPR45'] 66697 14569 LSTHRLIWRDQ True PC9_epitope_Rep1 1423.76843087239 1423.76677490379 60.864 3 -0.6833518943859146 0.20356880509304603 1.0 ['ENST00000475375.1_1_13:53010343-53024741:-|nuORF', 'ENSG00000136100|ENST00000378060|VPS36'] 129771 8447 VTKPFSQP True H1975_Epitope_Rep3 902.48616759934 902.48506993586 37.475 2 -0.6833915513760471 0.20357760401524078 1.0 ['CON__P50448'] 64067 9205 LQDSFEYINQ True H1975_Epitope_Rep3 1255.57208205127 1255.57098993586 40.4 2 -0.6833928434310577 0.20357760401524078 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'ENST00000504704.6_1_4:159690364-159754995:+|nuORF'] 130304 25033 VTTISLLLLA True NCI_RA007_Epitope_Rep5 1042.66379760814 1042.6627099358602 103.79 2 -0.6834022356893263 0.20357760401524078 1.0 ['ENST00000250457.7_1_14:34394881-34395019:-|nuORF'] 20129 6806 ENLLAIFDENE True H1975_Epitope_Rep3 1305.6088614828097 1305.60776993586 31.133 2 -0.6834081295791623 0.20357760401524078 1.0 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1'] 67912 10623 LTLDQAARP True PC9_epitope_Rep3 983.5399940773499 983.53888993586 45.81 2 -0.6834128797025293 0.20357760401524078 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 139559 7234 YTMMGSEDH True H1975_Epitope_Rep3 1069.38448160573 1069.3833899358601 32.797 2 -0.6834159823564874 0.20357760401524078 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 128433 20551 VSEITTFLYYF True H1975_Epitope_Rep3 1381.6805698710898 1381.6794699358602 85.899 2 -0.6834163876342991 0.20357760401524078 1.0 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF'] 62435 10517 LLSFPFLFLP True NCI_RA007_Epitope_Rep2 1192.68961843316 1192.68852993586 45.505 2 -0.6834844669219866 0.2036203941730934 1.0 ['ENST00000484819.1_1_1:154238957-154241481:+|nuORF'] 140190 12658 YVVIKFNKD True PC9_epitope_Rep5 1124.62299542532 1124.6213549037902 53.693 3 -0.6835051439434108 0.20362323275598262 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2'] 119997 16155 VFATDDGF True PC9_epitope_Rep1 870.3759484440199 870.37484993586 66.955 2 -0.6835228153652446 0.20362323275598262 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 107598 7485 TAGGERIFSA True NCI_RA007_Epitope_Rep1 1007.5036085686299 1007.50250993586 33.108 2 -0.6835527468866406 0.20362323275598262 1.0 ['ENSG00000188820|ENST00000368605|CALHM6'] 12438 7377 DKKKPSPPAP True NCI_RA007_Epitope_Rep5 1063.6025943339098 1063.6014899358602 35.055 2 -0.6835666585574123 0.20362323275598262 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 127446 3101 VQSIYHFYQK True NCI_RA007_Epitope_Rep1 1311.6611718391898 1311.65953490379 15.951 3 -0.6835821025356092 0.20363541778233396 1.0 ['ENST00000328965.8_2_11:120100260-120100626:+|nuORF'] 31205 14435 GDKPYECNV True PC9_epitope_Rep5 1023.4331460503099 1023.4320499358599 60.524 2 -0.6835907043114864 0.2036444866047522 1.0 ['ENSG00000167635|ENST00000443387|ZNF146'] 25471 11758 FENLDQQLR True H1975_Epitope_Rep1 1161.5778361380499 1161.5767299358602 50.219 2 -0.6836061800131927 0.2036444866047522 1.0 ['nc|ENSG00000205302|O60749-2|SNX2', 'ENSG00000205302|ENST00000379516|SNX2'] 114682 3748 TSSACNNNN True PC9_epitope_Rep2 923.3403082946301 923.33920993586 19.683 2 -0.6836524728802394 0.203671970624235 1.0 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 61772 9683 LLKGTQAP True PC9_epitope_Rep2 826.4912529797799 826.49014993586 42.585 2 -0.6836722081047143 0.20367480570344532 1.0 ['ENST00000445160.2_1_3:197282243-197282711:-|nuORF'] 66843 14052 LSVTWSHLFCR True PC9_epitope_Rep1 1347.6757763575101 1347.67466993586 58.888 2 -0.683735945698192 0.20367480570344532 1.0 ['ENST00000491251.1_1_22:30418565-30418601:+|nuORF'] 19267 16521 ELLLFEVAWE True PC9_epitope_Rep1 1247.64379043955 1247.64268993586 68.372 2 -0.6837460640879092 0.20367480570344532 1.0 ['ENSG00000111713|ENST00000261195|GYS2', 'GYS2|p.S526Vfs*2|1|0.18|ENSG00000111713|chr12:21542566-21542566|G/-|frameshift_variant'] 77875 7192 PAGREMAV True PC9_epitope_Rep1 829.4116227600898 829.41052993586 32.477 2 -0.6837492485580855 0.20367480570344532 1.0 ['ENST00000583444.1_1_17:80187666-80187933:+|nuORF'] 111962 10098 TLSESTHKYY True H1975_Epitope_Rep3 1227.57716743171 1227.5755349037902 43.883 3 -0.6837961310366966 0.20368698844947603 1.0 ['ENST00000478710.1_1_1:230825798-230827388:+|nuORF', 'nc|ENSG00000135775|Q14746-2|COG2', 'ENSG00000135775|ENST00000366669|COG2'] 56921 4821 LEDRPRDKPQR True NCI_RA007_Epitope_Rep1 1408.75350908424 1408.7518649037902 22.833 3 -0.6838407507865487 0.20369917082275188 1.0 ['ENSG00000130720|ENST00000372338|FIBCD1'] 36580 9226 GVLFRQIASVL True NCI_RA007_Epitope_Rep4 1201.7182927924898 1201.71664490379 42.339 3 -0.6838928022872712 0.2037266510624627 1.0 ['nc|ENSG00000124299|P12955-3|PEPD'] 23227 5604 EVQRLTSA True NCI_RA007_Epitope_Rep5 902.4821448480599 902.48104993586 28.244 2 -0.6839237343511175 0.2037357157062216 1.0 ['ENSG00000165506|ENST00000298292|DNAAF2', 'nc|ENSG00000165506|Q9NVR5-2|DNAAF2'] 58536 15753 LFCPRLCCL True PC9_epitope_Rep4 1066.51259975466 1066.5115099358602 68.517 2 -0.6839298872930901 0.2037357157062216 1.0 ['ENST00000290231.10_1_20:44690715-44691024:-|nuORF'] 87928 14918 QVPENYFY True H1975_Epitope_Rep2 1058.4709114580198 1058.4698099358602 62.534 2 -0.6839924452089198 0.20377225723551368 1.0 ['ENST00000557932.5_1_15:102513813-102516466:+|nuORF', 'ENST00000400706.3_1_12:88275-90926:+|nuORF', 'nc|ENSG00000292372|Q9NQA3|WASH6P', 'nc|ENSG00000185596|C4AMC7|WASH3P', 'nc|ENSG00000291134|Q6VEQ5|WASH2P', 'ENSG00000181404|ENST00000696149|WASHC1', 'nc|ENSG00000234769|A8MWX3|WASH4P', 'ENSG00000182484|ENST00000359512|WASH6P', 'ENST00000538033.2_1_2:114353729-114354265:+|nuORF', 'ENST00000482170.6_1_X:155252010-155252984:+|nuORF', 'ENST00000461007.6_1_X:155252382-155252984:+|nuORF'] 123232 5335 VHLWISFP True NCI_RA007_Epitope_Rep3 997.5385375253699 997.53744993586 27.993 2 -0.6840216749258404 0.20377225723551368 1.0 ['ENSG00000181001|ENST00000641645|OR52N1'] 63118 9463 LNPHKTKHHME True NCI_RA007_Epitope_Rep2 1370.6877380235403 1370.68664993586 41.42 2 -0.6840245991119659 0.20377225723551368 1.0 ['ENST00000356166.10_3_16:30681089-30681491:+|nuORF'] 62747 10815 LLYSQYFTYF True H1975_Epitope_Rep3 1343.64379043955 1343.64268993586 46.679 2 -0.6840302185978657 0.2037813197907425 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 124188 24318 VLAELLILS True PC9_epitope_Rep1 969.61103375929 969.60992993586 98.369 2 -0.6840723326090249 0.2037813197907425 1.0 ['ENST00000394715.1_1_14:64969481-64971219:-|nuORF'] 6167 18938 APPLPLALG True PC9_epitope_Rep1 847.51673945163 847.51564993586 77.629 2 -0.6841296006163682 0.2038209740577582 1.0 ['ENST00000476276.5_1_16:2892353-2892452:-|nuORF'] 87232 13691 QSPVLILGG True H1975_Epitope_Rep1 882.5174677276199 882.51636993586 57.798 2 -0.6841320165022715 0.2038209740577582 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000467739.1_1_19:38837137-38839675:+|nuORF'] 124076 23516 VKRRRCGTR True PC9_epitope_Rep6 1130.6567126787797 1130.6556099358602 103.59 2 -0.6841854239480318 0.20383315233185983 1.0 ['ENST00000229633.6_1_6:126277992-126278139:+|nuORF'] 90516 19230 RKDKKKLRRLL True H1975_Epitope_Rep2 1452.9728847657198 1452.97123490379 79.813 3 -0.6842512259187982 0.2038912172290373 1.0 ['ENSG00000196284|ENST00000371459|SUPT3H', 'nc|ENSG00000196284|O75486-4|SUPT3H'] 22989 9522 EVIPYPSTLR True H1975_Epitope_Rep1 1173.63937376545 1173.63826993586 41.549 2 -0.6844524884844473 0.20396145610278374 1.0 ['ENST00000468499.5_1_7:99687333-99688626:+|nuORF'] 129983 11098 VTPEIPAGLP True PC9_epitope_Rep1 992.5542471591598 992.55314993586 47.575 2 -0.6844627835238996 0.20396145610278374 1.0 ['ENSG00000125657|ENST00000245817|TNFSF9'] 130355 19056 VTVDEELGEI True PC9_epitope_Rep3 1102.5393849406598 1102.5382899358601 78.521 2 -0.6845016091875202 0.20398580649108317 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5'] 40591 5969 HTDGRWLRS True H1975_Epitope_Rep1 1126.5631891334199 1126.56208993586 28.03 2 -0.6845309870456402 0.20398580649108317 1.0 ['ENST00000531428.1_1_11:17099289-17099355:-|nuORF'] 8148 16130 ATFPDKEP True PC9_epitope_Rep1 903.4337976733099 903.43270993586 66.86 2 -0.6845483842158343 0.20399798112659254 1.0 ['ENSG00000224470|ENST00000427980|ATXN1L'] 19570 6529 ELRDHRKYWCR True H1975_Epitope_Rep1 1560.7731989829997 1560.7715549037898 30.171 3 -0.6846095216546695 0.20402544965129082 1.0 ['nc|ENSG00000161649|Q6UXG3-3|CD300LG', 'nc|ENSG00000161649|Q6UXG3-2|CD300LG', 'nc|ENSG00000161649|Q6UXG3-5|CD300LG', 'nc|ENSG00000161649|Q6UXG3-4|CD300LG', 'ENSG00000161649|ENST00000317310|CD300LG'] 15972 9264 EDWERLSL True PC9_epitope_Rep2 1046.50327421546 1046.5021699358601 40.971 2 -0.6846396894616594 0.20405291733578038 1.0 ['ENST00000446527.5_1_1:101542987-101549071:+|nuORF'] 133804 22732 WLRRLILELLK True PC9_epitope_Rep5 1451.9340396455098 1451.93239490379 92.445 3 -0.6846610664314784 0.20408943537040436 1.0 ['MTOR|p.S1288I|1|0.12|ENSG00000198793|chr1:11204642-11204642|C/A|missense_variant'] 119914 6029 VEWMQDFEAF True NCI_RA007_Epitope_Rep4 1300.5434247752798 1300.5423299358602 29.809 2 -0.6846681203932025 0.20408943537040436 1.0 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'nc|ENSG00000198522|Q9HCN4-2|GPN1', 'nc|ENSG00000198522|Q9HCN4-3|GPN1'] 66324 8490 LSQLSVTDV True PC9_epitope_Rep4 960.5127762699999 960.51166993586 40.13 2 -0.6846927656350354 0.20408943537040436 1.0 ['nc|ENSG00000248290|Q16473|TNXA', 'ENST00000507684.1_1_6:31978569-31980175:-|nuORF', 'nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'nc|ENSG00000168477|P22105-2|TNXB'] 20027 4699 EMTAKVRDLQ True H1975_Epitope_Rep3 1189.61250739461 1189.6108649037901 23.2 3 -0.6847504960646732 0.2041137788652699 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4'] 126169 9822 VPFREAALR True H1975_Epitope_Rep1 1057.6032630402499 1057.60216993586 42.708 2 -0.6847921803759904 0.2041137788652699 1.0 ['ENSG00000117597|ENST00000491415|UTP25'] 5618 14205 APAAVVVAP True PC9_epitope_Rep4 793.4697892592098 793.46868993586 62.548 2 -0.6848127225074827 0.20412595005428882 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 111103 17125 TLEHLSIL True PC9_epitope_Rep4 924.5280324113199 924.52692993586 73.873 2 -0.6848268591621142 0.20413499915893138 1.0 ['ENST00000515408.5_1_5:112353398-112353584:+|nuORF'] 61564 16086 LLGLKKLSFYY True NCI_RA007_Epitope_Rep4 1343.78530972315 1343.7842099358602 69.766 2 -0.6848402506491219 0.20413499915893138 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 134048 17971 WQGRRRASRRL True NCI_RA007_Epitope_Rep3 1440.82868014352 1440.82758993586 78.746 2 -0.6848596782451254 0.20414404771006958 1.0 ['TUT1|p.R782S|1|0.18|ENSG00000149016|chr11:62575375-62575375|G/T|missense_variant'] 118604 9173 VEAKLEHWYIT True H1975_Epitope_Rep1 1387.7136013348697 1387.71250993586 40.189 2 -0.6848797158577112 0.20414404771006958 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000561258.1_1_15:62276000-62283926:-|nuORF'] 44606 13314 IPHPLGHMCK True PC9_epitope_Rep3 1131.5681404848299 1131.56650490379 56.247 3 -0.6849136996962455 0.20415309570775417 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 115453 4277 TVFQYPVGWPP True H1975_Epitope_Rep3 1289.6444591458896 1289.64280490379 21.568 3 -0.6849192465149238 0.20415309570775417 1.0 ['ENSG00000100319|ENST00000344318|ZMAT5'] 65490 5455 LSFLSYNRSLD True NCI_RA007_Epitope_Rep1 1313.6615657620098 1313.6599349037901 25.292 3 -0.6849759856783649 0.2041958469677972 1.0 ['TMTC1|p.A179S|1|0.12|ENSG00000133687|chr12:29758723-29758723|C/A|missense_variant'] 138516 12731 YRKMKERL True PC9_epitope_Rep3 1122.6331832695398 1122.6315449037902 53.99 3 -0.6850100096533371 0.2042080154130797 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 85703 5675 QLRTCFSRQRF True NCI_RA007_Epitope_Rep1 1440.7408362255599 1440.73918490379 26.133 3 -0.6850345855211134 0.20422018348623852 1.0 ['ENST00000263657.6_1_2:68385017-68385164:+|nuORF'] 67734 5955 LTGPAICH True PC9_epitope_Rep3 810.40580910366 810.40470993586 27.964 2 -0.6851379201792964 0.2042688520579781 1.0 ['ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 98144 13327 SICVMLVVI True PC9_epitope_Rep1 975.5496964560299 975.54858993586 56.122 2 -0.6851637147600755 0.2042688520579781 1.0 ['ENSG00000228594|ENST00000422725|FNDC10'] 82105 17055 PTAEWFCPTL True PC9_epitope_Rep6 1163.5321318155898 1163.53102993586 78.167 2 -0.6851755039875788 0.2042688520579781 1.0 ['ENST00000541199.5_3_6:142623767-142688843:+|nuORF', 'ENST00000435011.6_3_6:142623767-142688843:+|nuORF'] 138159 5368 YQNARDLLN True NCI_RA007_Epitope_Rep3 1105.55162139021 1105.5505299358601 28.122 2 -0.6851914200044835 0.2042688520579781 1.0 ['nc|ENSG00000057294|Q99959|PKP2', 'ENSG00000057294|ENST00000340811|PKP2'] 19878 16775 ELVSMIKTY True H1975_Epitope_Rep2 1082.56818297114 1082.5670899358602 69.763 2 -0.6852114962655054 0.2042810182707744 1.0 ['nc|ENSG00000130024|Q8WUB8-3|PHF10', 'nc|ENSG00000130024|Q8WUB8-2|PHF10', 'ENSG00000130024|ENST00000339209|PHF10'] 59585 10825 LGRTGVLK True PC9_epitope_Rep6 842.5337864981 842.53268993586 52.491 2 -0.685282822964194 0.2042931841115494 1.0 ['CMA1|p.W149L|1|0.25|ENSG00000092009|chr14:24506182-24506182|C/A|missense_variant'] 110559 15173 TIRWLFETCP True PC9_epitope_Rep2 1264.6274291827597 1264.62577490379 63.619 3 -0.6853268062292277 0.20430814389017138 1.0 ['ENSG00000168334|ENST00000340369|XIRP1', 'nc|ENSG00000168334|Q702N8-2|XIRP1'] 74324 20116 NILSILVEL True PC9_epitope_Rep2 1012.6168474157199 1012.61574993586 82.785 2 -0.6853480396396873 0.20430814389017138 1.0 ['nc|ENSG00000135049|Q9UPW5-2|AGTPBP1', 'ENSG00000135049|ENST00000357081|AGTPBP1', 'nc|ENSG00000135049|Q9UPW5-3|AGTPBP1', 'ENST00000376080.2_1_9:88272482-88307688:-|nuORF', 'ENST00000376081.8_1_9:88270186-88327448:-|nuORF'] 107663 9412 TAIQRALDE True PC9_epitope_Rep2 1015.5298233164699 1015.52872993586 41.543 2 -0.6853546069379644 0.20430814389017138 1.0 ['ENST00000397040.5_1_20:37117115-37117187:+|nuORF'] 82469 20510 PVDTRERGLK True PC9_epitope_Rep1 1169.6516697846498 1169.6500349037901 83.702 3 -0.6853579173718266 0.20430814389017138 1.0 ['ENSG00000274588|ENST00000611977|DGKK'] 82081 8112 PSYLLTCR True PC9_epitope_Rep1 951.48478770035 951.48368993586 36.029 2 -0.6853711711599186 0.20430814389017138 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 113955 3751 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 20.87 3 -0.6853947807765639 0.2043203082003302 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 54532 11114 LAAIRDASRPP True H1975_Epitope_Rep3 1165.6567551650899 1165.65564993586 47.845 2 -0.6854978766999023 0.2043936220628927 1.0 ['ENST00000342085.8_1_16:2647774-2647957:+|nuORF'] 90587 23122 RKIFRLIKK True H1975_Epitope_Rep2 1200.8182816172796 1200.8171899358601 95.398 2 -0.6855808580719689 0.20442107194178616 1.0 ['ENST00000392859.7_1_11:118471445-118471652:+|nuORF'] 18224 5796 EIRSQPVP True H1975_Epitope_Rep2 924.5028802926398 924.50178993586 27.283 2 -0.6855939858387388 0.20443010884187354 1.0 ['nc|ENSG00000068079|P80217-2|IFI35', 'ENSG00000068079|ENST00000415816|IFI35'] 133698 23955 WLCRRKWK True PC9_epitope_Rep4 1174.6545874204596 1174.65348993586 100.61 2 -0.6856070165356904 0.20443010884187354 1.0 ['ENST00000560334.5_1_15:79271198-79356973:-|nuORF', 'ENSG00000058335|ENST00000558480|RASGRF1', 'nc|ENSG00000058335|Q13972|RASGRF1', 'ENST00000502677.1_1_5:80366283-80383248:+|nuORF', 'RASGRF2|p.A703Cfs*9|1|0.32|ENSG00000113319|chr5:81113550-81113551|-/T|frameshift_variant', 'ENSG00000113319|ENST00000265080|RASGRF2'] 101164 16069 SLVQRVETI True PC9_epitope_Rep3 1043.59750895347 1043.59640993586 66.959 2 -0.6856848884716157 0.20446971781466874 1.0 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 94290 10936 RWSRRTLYVQ True NCI_RA007_Epitope_Rep3 1363.74730150499 1363.7462099358602 50.101 2 -0.6856872211220759 0.20446971781466874 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 8676 9934 AVAYIAGF True NCI_RA007_Epitope_Rep5 810.4275900940598 810.42648993586 44.853 2 -0.6857047872898192 0.2044756270922181 1.0 ['ENSG00000157240|ENST00000287934|FZD1'] 124364 11863 VLDTKNYKQ True H1975_Epitope_Rep1 1107.59242357303 1107.5913299358601 50.63 2 -0.685717791283804 0.2044756270922181 1.0 ['ENSG00000119878|ENST00000238892|CRIPT', 'ENST00000486447.1_1_2:46844062-46851363:+|nuORF'] 18616 11883 ELAKSLKVDP True H1975_Epitope_Rep3 1098.62847472858 1098.62736993586 50.858 2 -0.6857227654905276 0.2044756270922181 1.0 ['ENST00000519230.1_1_5:157413535-157414072:-|nuORF', 'ENSG00000105401|ENST00000222005|CDC37'] 15393 6671 EALREVWKPD True H1975_Epitope_Rep2 1241.6404363946099 1241.63878490379 30.569 3 -0.6857760630755529 0.2045152316463629 1.0 ['ENSG00000153179|ENST00000542104|RASSF3'] 34875 9893 GQVLLRAQL True NCI_RA007_Epitope_Rep5 996.6080140675199 996.60690993586 44.696 2 -0.6857785649289726 0.2045152316463629 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 22885 15307 EVEVIGGA True PC9_epitope_Rep5 772.3966838885998 772.39613496793 63.888 1 -0.6858141421840778 0.20452426442491403 1.0 ['chr17:78182682-78183754|494|18.45|0.73|4.66|-|ENST00000586613|TK1,TK1', 'ENSG00000167900|ENST00000301634|TK1'] 45701 11444 ISLKCHQPV True PC9_epitope_Rep1 1023.5535359665099 1023.55242993586 48.897 2 -0.685825543746822 0.20452426442491403 1.0 ['nc|ENSG00000229921|Q9Y6Z4-2|KIF25-AS1'] 122960 9068 VGWKGCAP True PC9_epitope_Rep6 816.3952444199598 816.39414993586 44.944 2 -0.6859025763466033 0.2045332966512296 1.0 ['ENST00000482963.1_1_10:126234669-126305191:+|nuORF', 'ENST00000493240.1_1_10:126234573-126301926:+|nuORF'] 14291 7297 DTAQIENKEAY True H1975_Epitope_Rep3 1280.5884603914 1280.5873699358601 33.042 2 -0.685911142972468 0.2045332966512296 1.0 ['ENSG00000166398|ENST00000299505|GARRE1'] 90588 23209 RKIFRLIKK True H1975_Epitope_Rep2 1200.8182816172796 1200.8171899358601 95.738 2 -0.6859336922102641 0.20454545454545456 1.0 ['ENST00000392859.7_1_11:118471445-118471652:+|nuORF'] 107476 2706 TAADQEKNP True NCI_RA007_Epitope_Rep2 972.4512386426 972.4501499358599 14.753 2 -0.685955333972071 0.2045576120680432 1.0 ['ENSG00000213190|ENST00000368921|MLLT11'] 114782 5430 TTANYDTDDP True H1975_Epitope_Rep3 1111.43056276767 1111.4294699358602 25.945 2 -0.6859701765178601 0.20458192599837996 1.0 ['MMP9|p.R267P|2|0.24|ENSG00000100985|chr20:46011293-46011293|G/C|missense_variant'] 44225 12589 ILSQLSNPP True H1975_Epitope_Rep2 967.53384606775 967.53274993586 53.521 2 -0.6859742334355208 0.20458192599837996 1.0 ['ENSG00000205835|ENST00000442080|GMNC'] 30865 9773 GARDTNVLL True PC9_epitope_Rep6 957.5243440132099 957.52324993586 48.034 2 -0.6860670148864779 0.20460311153223096 1.0 ['ENSG00000163491|ENST00000691995|NEK10', 'nc|ENSG00000163491|Q6ZWH5|NEK10', 'nc|ENSG00000163491|Q6ZWH5-4|NEK10', 'nc|ENSG00000163491|Q6ZWH5-2|NEK10'] 31117 20926 GCFGGGCGGG True H1975_Epitope_Rep1 770.2475942100999 770.24704496793 86.936 1 -0.6860805987294897 0.20460311153223096 1.0 ['ENST00000529511.2_1_11:84256393-84256642:-|nuORF'] 1527 3971 AEEQRAHVQEF True NCI_RA007_Epitope_Rep2 1342.6265772356194 1342.62493490379 20.082 3 -0.6860957522123812 0.20460311153223096 1.0 ['nc|ENSG00000185917|Q9NVD3-3|SETD4', 'ENSG00000185917|ENST00000332131|SETD4', 'nc|ENSG00000185917|Q9NVD3-4|SETD4'] 65089 18792 LSDLNQLV True PC9_epitope_Rep3 900.4916469025999 900.49054993586 77.508 2 -0.6862152417490561 0.20464270432178006 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2', 'ECM2|p.F576Lfs*35|1|0.41|ENSG00000106823|chr9:92500930-92500930|A/-|frameshift_variant'] 66160 11605 LSPEKYVTSAP True PC9_epitope_Rep1 1190.6183039677 1190.61664490379 49.517 3 -0.6862395747921087 0.20464270432178006 1.0 ['nc|ENSG00000211899|P01871-1|IGHM', 'nc|ENSG00000211899|P01871|IGHM'] 61566 16088 LLGLKKLSFYY True NCI_RA007_Epitope_Rep5 1343.78530972315 1343.7842099358602 68.613 2 -0.6862540918926323 0.20465173140988416 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 4242 6805 AIGRCGFSGR True NCI_RA007_Epitope_Rep2 1022.5079827564199 1022.5068899358599 31.085 2 -0.6862754651539474 0.20465173140988416 1.0 ['nc|ENSG00000288642|P51861|CDR1'] 22439 9457 ETFTALSVLG True H1975_Epitope_Rep2 1036.5440763982797 1036.5429699358601 41.344 2 -0.6863635716955484 0.20471562605054858 1.0 ['ENSG00000116459|ENST00000369722|ATP5PB'] 3154 10785 AGEAGRNERP True H1975_Epitope_Rep3 1055.5108192073899 1055.5097299358602 46.564 2 -0.6863827343450126 0.20471562605054858 1.0 ['ENST00000581005.1_1_17:71069947-71084903:-|nuORF'] 46300 10117 ITENDIQIA True PC9_epitope_Rep2 1015.5185899264299 1015.51748993586 44.253 2 -0.6863953946271449 0.20471562605054858 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant'] 54651 20571 LADSISINL True PC9_epitope_Rep2 944.5178616504401 944.51731496793 84.56 1 -0.6864174254359449 0.20471562605054858 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2'] 123329 13916 VHTVKKTYE True PC9_epitope_Rep3 1103.5975089534697 1103.59640993586 58.609 2 -0.686466119330197 0.2047277783720184 1.0 ['ENSG00000197863|ENST00000356725|ZNF790'] 63549 10027 LPLAPHKPP True H1975_Epitope_Rep2 968.58073669052 968.57962993586 43.561 2 -0.686509393894233 0.2047552105617016 1.0 ['nc|ENSG00000130592|P33241-3|LSP1'] 126368 19104 VPLALVSGL True PC9_epitope_Rep6 867.54295419947 867.54184993586 86.133 2 -0.6865342336072333 0.20479792191916876 1.0 ['ENST00000301463.8_1_12:53459285-53459390:-|nuORF'] 136063 9365 YFWNIRAYRFF True PC9_epitope_Rep4 1581.7881036878096 1581.7864649037901 43.632 3 -0.6866457277096354 0.20485591174403325 1.0 ['ENST00000471538.1_1_1:16200000-16200039:+|nuORF'] 88099 4003 QVVWRSCR True NCI_RA007_Epitope_Rep4 1032.528718201 1032.5276299358602 21.652 2 -0.6866699729971022 0.20486806117927484 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 18466 16178 EKLCRARRYLY True NCI_RA007_Epitope_Rep2 1469.7925374452498 1469.79144993586 67.656 2 -0.6867251711223478 0.20487707986371068 1.0 ['ENSG00000085999|ENST00000371975|RAD54L'] 21539 6752 ERRTMLLFCQP True PC9_epitope_Rep2 1392.7006112063598 1392.69895490379 31.378 3 -0.6867565293480894 0.20487707986371068 1.0 ['nc|ENSG00000105971|P51636-3|CAV2'] 112635 16223 TPEMRSYHFRK True NCI_RA007_Epitope_Rep1 1450.71395277138 1450.71284993586 67.212 2 -0.6868570200181139 0.2049809014514897 1.0 ['ENSG00000170379|ENST00000684770|TCAF2', 'nc|ENSG00000170379|A6NFQ2-3|TCAF2', 'nc|ENSG00000170379|A6NFQ2-2|TCAF2', 'ENSG00000283528|ENST00000636941|TCAF2C'] 27306 5554 FLYWKLFYPEC True NCI_RA007_Epitope_Rep3 1507.7209952144299 1507.71934490379 28.84 3 -0.6868601134617982 0.20498678441018747 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000429726.2_7:74299379-74299868:-|nuORF', 'ENST00000423834.6_1_7:72469123-72469612:-|nuORF', 'ENST00000380775.3_7:74298994-74299868:-|nuORF'] 60500 18065 LINLTKLAP True PC9_epitope_Rep2 981.6222671493299 981.6211699358599 74.789 2 -0.686905431520504 0.20498678441018747 1.0 ['CON__REFSEQ:XP_585019'] 135480 5825 YEDESRKETNK True H1975_Epitope_Rep3 1397.6422868694096 1397.64064490379 27.426 3 -0.6869551298958355 0.20498678441018747 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 7314 17341 ARRTKLTA True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56030993586 73.477 2 -0.6870145212759811 0.20498953511465542 1.0 47312 11028 IYGEKFEDENF True NCI_RA007_Epitope_Rep4 1389.6088614828097 1389.60776993586 49.29 2 -0.687029131694666 0.20498953511465542 1.0 ['ENSG00000196262|ENST00000468812|PPIA', 'nc|ENSG00000196262|P62937-2|PPIA', 'ENST00000527147.1_1_11:100537243-100537690:+|nuORF', 'ENSG00000171497|ENST00000307720|PPID'] 26895 9171 FLFSLFDSSL True PC9_epitope_Rep5 1174.5910265906998 1174.58992993586 40.223 2 -0.6870424919709519 0.20498953511465542 1.0 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|2|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|55'] 24800 12545 FCHHGGVFHFL True H1975_Epitope_Rep3 1299.5971321139898 1299.59548490379 53.453 3 -0.6870558081369204 0.20498953511465542 1.0 ['CCR3|p.Y235Vfs*38|1|0.55|ENSG00000183625|chr3:46265851-46265852|-/A|frameshift_variant'] 101885 14051 SPLGLAGL True H1975_Epitope_Rep2 726.42759009406 726.4270449679301 59.199 1 -0.6870668956472454 0.20499854870987946 1.0 ['nc|ENSG00000197558|A2VEC9|SSPOP', 'nc|ENSG00000197558|A2VEC9-2|SSPOP'] 139444 4963 YTESDVHPS True H1975_Epitope_Rep2 1033.43525422529 1033.4341499358602 24.173 2 -0.687080609000319 0.20499854870987946 1.0 ['nc|ENSG00000164136|P40933-2|IL15', 'ENSG00000164136|ENST00000320650|IL15'] 54602 12445 LADEEKKLRRS True PC9_epitope_Rep1 1343.75211210191 1343.75047490379 52.735 3 -0.6870843064891453 0.205010693553315 1.0 ['ENSG00000211455|ENST00000389032|STK38L'] 74444 4287 NIYRLVTK True NCI_RA007_Epitope_Rep3 1005.5971150306499 1005.59600993586 23.59 2 -0.687114676720259 0.20501970608902875 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 38186 4150 HESFGYKRE True NCI_RA007_Epitope_Rep2 1151.5359713260698 1151.53432490379 20.781 3 -0.6871248705894191 0.20501970608902875 1.0 ['ENST00000494481.5_1_3:62304831-62304894:+|nuORF'] 19658 9754 ELRTYVMPNAP True PC9_epitope_Rep3 1289.64380752289 1289.64217490379 42.472 3 -0.6872596170554837 0.20513251355686243 1.0 ['ENSG00000167136|ENST00000372642|ENDOG'] 90578 8230 RKHTLFSGQP True PC9_epitope_Rep3 1169.63054041725 1169.62888490379 36.635 3 -0.687266625733307 0.20513251355686243 1.0 ['ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.P2337Tfs*7|1|0.63|ENSG00000146839|chr7:100787917-100787918|-/A|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 54867 6480 LAGGPKPY True NCI_RA007_Epitope_Rep2 801.4384891309301 801.43738993586 29.815 2 -0.6872757090199627 0.20513251355686243 1.0 ['nc|ENSG00000162836|Q9NPH0-2|ACP6', 'ENSG00000162836|ENST00000583509|ACP6'] 12804 15440 DLITRPCSTL True PC9_epitope_Rep1 1117.58014463717 1117.5790499358602 64.209 2 -0.6873013362679813 0.20517520545015733 1.0 ['ENST00000279873.11_2_10:63851230-63851317:+|nuORF'] 88957 4999 REDLWEQRA True H1975_Epitope_Rep2 1201.58398414765 1201.58233490379 24.313 3 -0.6873182275461334 0.20520262116791665 1.0 ['ENST00000425013.6_1_7:5660451-5660559:-|nuORF'] 98314 14468 SIGCTPDTVAS True PC9_epitope_Rep3 1049.46992548185 1049.4688299358602 60.758 2 -0.6873302040557503 0.20521476141015457 1.0 ['ENSG00000101049|ENST00000373100|SGK2', 'nc|ENSG00000101049|Q9HBY8-3|SGK2', 'nc|ENSG00000101049|Q9HBY8-1|SGK2'] 96813 10932 SESEEEQL True PC9_epitope_Rep5 949.3876353265298 949.38652993586 47.04 2 -0.687458013398359 0.20525117991171662 1.0 ['ENST00000543938.5_1_15:83328314-83349061:-|nuORF', 'nc|ENSG00000103723|Q13367-3|AP3B2', 'nc|ENSG00000103723|Q13367|AP3B2', 'ENSG00000103723|ENST00000535359|AP3B2'] 79242 17033 PGGHSCLV True H1975_Epitope_Rep2 768.35885891124 768.35776993586 70.774 2 -0.6874580555624292 0.20525117991171662 1.0 ['ENST00000460804.5_1_1:21048287-21050865:-|nuORF', 'nc|ENSG00000189410|Q6ZV89-2|SH2D5', 'SH2D5|p.V374Yfs*2|1|0.31|ENSG00000189410|chr1:20721944-20721945|CC/-|frameshift_variant', 'ENSG00000189410|ENST00000444387|SH2D5', 'SH2D5|p.E288K|1|0.28|ENSG00000189410|chr1:20723672-20723672|C/T|missense_variant'] 99765 6953 SLGLSQLQV True NCI_RA007_Epitope_Rep3 943.53384606775 943.53274993586 34.456 2 -0.6874664841326198 0.20525117991171662 1.0 ['ENSG00000131668|ENST00000253968|BARX1', 'nc|ENSG00000131668|Q9HBU1-2|BARX1'] 110927 11451 TLASTFSNG True PC9_epitope_Rep2 896.4239612656 896.42286993586 49.365 2 -0.6874891153071641 0.20525978191148173 1.0 ['nc|ENSG00000125851|P16519-2|PCSK2', 'nc|ENSG00000125851|P16519-3|PCSK2', 'ENSG00000125851|ENST00000262545|PCSK2'] 131116 24525 VVNIRNLIEK True PC9_epitope_Rep4 1196.72410644892 1196.7235749679298 102.82 1 -0.6874955592423929 0.20525978191148173 1.0 ['ENST00000395603.7_1_X:76939207-76939318:-|nuORF'] 63505 20395 LPIVRTWRLN True H1975_Epitope_Rep1 1266.75607528354 1266.75442490379 84.82 3 -0.6875199710134565 0.20525978191148173 1.0 ['ENST00000402426.2_1_6:73765044-73765512:+|nuORF'] 48151 18029 KAQTFVKAI True PC9_epitope_Rep4 1004.6018660579198 1004.60076993586 77.412 2 -0.6875229322958593 0.20525978191148173 1.0 ['NCK1-IL20RB|1|fusion', 'NCK1-IL20RB|4|fusion', 'ENST00000475972.1_1_3:136705553-136729062:+|nuORF', 'ENSG00000174564|ENST00000329582|IL20RB'] 134037 14976 WQFLRKNWNKL True PC9_epitope_Rep5 1531.8412018898296 1531.83955490379 62.609 3 -0.6875263956364718 0.20525978191148173 1.0 ['ENSG00000164307|ENST00000443439|ERAP1', 'nc|ENSG00000164307|Q9NZ08-2|ERAP1'] 103970 24655 SRRFRGRH True PC9_epitope_Rep4 1070.5958266743799 1070.5947299358602 103.33 2 -0.6875276581044362 0.20525978191148173 1.0 ['ENST00000513709.1_1_5:5235169-5239274:+|nuORF', 'nc|ENSG00000145536|Q8TE57-2|ADAMTS16', 'ENSG00000145536|ENST00000274181|ADAMTS16'] 10201 11247 CDPEELEEK True NCI_RA007_Epitope_Rep1 1090.4488556841 1090.4477499358602 47.748 2 -0.6875346690698914 0.20525978191148173 1.0 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1', 'ENST00000529206.1_1_14:95595738-95599795:-|nuORF'] 11079 7122 DDYKTIKS True PC9_epitope_Rep5 968.48147614172 968.48036993586 32.362 2 -0.6876083990741549 0.20527151670637103 1.0 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-2|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-1|CFAP47', 'CFAP47|p.V527Lfs*2|1|0.43|ENSG00000165164|chrX:35966729-35966729|G/-|frameshift_variant'] 48539 12333 KEFSRERGLMT True H1975_Epitope_Rep3 1352.6870693171998 1352.6859699358602 52.622 2 -0.6876369734235149 0.20527151670637103 1.0 ['ENST00000567571.5_1_15:75080899-75085480:+|nuORF'] 77326 12483 NYKKFYEQF True PC9_epitope_Rep4 1265.6080736371698 1265.60641490379 55.822 3 -0.6876508503194334 0.20527151670637103 1.0 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF'] 108141 13033 TDQIWKFQRHD True H1975_Epitope_Rep2 1472.71606094636 1472.7149699358602 55.251 2 -0.687668879097902 0.20527151670637103 1.0 ['ENSG00000142185|ENST00000397928|TRPM2', 'nc|ENSG00000142185|O94759-2|TRPM2'] 46305 10006 ITEPKGVFAK True H1975_Epitope_Rep1 1088.6229954253197 1088.62188993586 43.425 2 -0.6876862151415538 0.20527151670637103 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'OBSCN|p.H4054Tfs*31|1|0.21|ENSG00000154358|chr1:228307133-228307133|C/-|frameshift_variant', 'OBSCN|p.R2782Lfs*22|1|0.23|ENSG00000154358|chr1:228282079-228282080|-/T|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 90615 25567 RKKKKKHH True NCI_RA007_Epitope_Rep5 1088.7043144942 1088.70377496793 105.88 1 -0.6876896602342485 0.20527151670637103 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 59702 12881 LGTNGARKASK True H1975_Epitope_Rep3 1101.62545503681 1101.6243499358602 54.771 2 -0.6877180711297332 0.2052836527449034 1.0 ['ENST00000286657.9_2_4:73434696-73434942:-|nuORF'] 115170 7412 TVAGYLLHTSP True NCI_RA007_Epitope_Rep2 1157.6080736371698 1157.6069699358602 33.456 2 -0.6877795266406405 0.20529265350374884 1.0 ['ENST00000547237.1_1_14:25900789-25901323:-|nuORF'] 93268 24662 RRRRWRRRRPA True NCI_RA007_Epitope_Rep5 1620.9886434559198 1620.9875499358602 102.35 2 -0.6878107917567369 0.20529265350374884 1.0 ['ENST00000556735.1_1_14:51134724-51134856:-|nuORF'] 90151 8080 RHCMQLWR True PC9_epitope_Rep5 1128.5433227193198 1128.54166490379 36.018 3 -0.6879038598285432 0.2053200586366968 1.0 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'ENST00000472270.1_1_X:70752999-70756209:+|nuORF', 'ENST00000488174.5_1_X:70752999-70764494:+|nuORF'] 46031 12132 ISVMVTGGP True PC9_epitope_Rep1 859.4473395624699 859.44624993586 51.528 2 -0.687965207066841 0.2053443273782257 1.0 ['ENST00000511979.1_1_5:138723708-138724322:-|nuORF', 'nc|ENSG00000170476|Q8WU39-3|MZB1', 'ENST00000417694.6_1_5:138723456-138724322:-|nuORF', 'ENST00000503481.5_1_5:138723456-138725442:-|nuORF', 'ENSG00000170476|ENST00000302125|MZB1'] 25461 16943 FENDINSVLF True H1975_Epitope_Rep1 1196.5713537752802 1196.5702499358601 70.591 2 -0.6880536182485304 0.2053443273782257 1.0 ['SI|p.G140E|1|0.3|ENSG00000090402|chr3:165068786-165068786|C/T|missense_variant'] 90364 25140 RIKAITTC True NCI_RA007_Epitope_Rep1 904.5164221818001 904.51587496793 104.03 1 -0.6881315166175938 0.20535646119314105 1.0 ['ENSG00000187105|ENST00000553558|HEATR4'] 114954 4268 TTHRVETPP True H1975_Epitope_Rep2 1036.53015766964 1036.5290699358602 21.53 2 -0.6881533914450912 0.20536859463751297 1.0 ['nc|ENSG00000078687|Q9HCJ0-4|TNRC6C', 'ENSG00000078687|ENST00000696270|TNRC6C', 'TNRC6C|p.K1213Sfs*58|1|0.25|ENSG00000078687|chr17:78086928-78086928|A/-|frameshift_variant', 'nc|ENSG00000078687|Q9HCJ0-1|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-2|TNRC6C', 'ENST00000591851.5_1_17:76047306-76073478:+|nuORF'] 59990 15316 LHPVSAIISL True PC9_epitope_Rep2 1048.62808080576 1048.6269899358601 64.194 2 -0.6881739391093992 0.20537759184047394 1.0 ['ENST00000532485.5_1_11:76734550-76734952:+|nuORF'] 116273 12957 TVVGTADPSLP True PC9_epitope_Rep2 1055.54989005471 1055.5487899358602 55.131 2 -0.688179879042994 0.20537759184047394 1.0 ['ENST00000596243.5_1_19:50382004-50382127:+|nuORF'] 126187 12089 VPGHHVTP True NCI_RA007_Epitope_Rep1 842.43988611326 842.43878993586 51.011 2 -0.688290021623637 0.205432392817882 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 17931 10883 EIEIEARRLI True H1975_Epitope_Rep1 1240.71393568804 1240.71282993586 46.821 2 -0.6883169520116283 0.205432392817882 1.0 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 90570 25196 RKGKKKKRWH True PC9_epitope_Rep5 1350.8472903297798 1350.8461899358601 102.06 2 -0.6883354699684364 0.20544452417667985 1.0 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 82471 20422 PVDTRERGLK True PC9_epitope_Rep5 1169.6516697846498 1169.6500349037901 83.588 3 -0.6883633179717261 0.20546878578298905 1.0 ['ENSG00000274588|ENST00000611977|DGKK'] 90305 13390 RHWQWWRVFTK True H1975_Epitope_Rep1 1628.8476842526 1628.84658993586 56.615 2 -0.6883811204162756 0.20546878578298905 1.0 ['nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 67723 12909 LTGIWQMRHLK True H1975_Epitope_Rep1 1381.7652600682502 1381.76416993586 54.728 2 -0.6884110639556217 0.20549618320610688 1.0 ['nc|ENSG00000158604|Q7Z7H5-2|TMED4', 'ENSG00000158604|ENST00000457408|TMED4'] 87567 6435 QTMRRRQRREW True NCI_RA007_Epitope_Rep2 1601.84334423149 1601.84170490379 29.638 3 -0.6884290557196419 0.2055083128501855 1.0 ['nc|ENSG00000093009|O75419-2|CDC45', 'ENSG00000093009|ENST00000263201|CDC45', 'nc|ENSG00000093009|O75419-3|CDC45'] 78803 12095 PEMHEYMR True H1975_Epitope_Rep3 1091.45283594907 1091.4517299358602 51.688 2 -0.6884713052441297 0.2055815089615584 1.0 ['ENSG00000198785|ENST00000361820|GRIN3A', 'GRIN3A|p.S896Vfs*7|1|0.32|ENSG00000198785|chr9:101613449-101613456|CCATGTGA/-|frameshift_variant'] 137251 19733 YLFQIINGI True PC9_epitope_Rep4 1079.60153170475 1079.6004299358601 84.027 2 -0.6886980829870688 0.20566996931438256 1.0 ['CDKL2|p.L228Ffs*11|1|0.26|ENSG00000138769|chr4:75603930-75603930|G/-|frameshift_variant', 'nc|ENSG00000138769|Q92772|CDKL2', 'ENSG00000138769|ENST00000307465|CDKL2'] 33855 18753 GLVLSLEEQL True PC9_epitope_Rep5 1099.61249031127 1099.6119749679299 77.146 1 -0.6887823339635515 0.20577369320957498 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 92379 8931 RQQRRRFRFHH True NCI_RA007_Epitope_Rep4 1622.8879263551396 1622.88682993586 41.188 2 -0.6888345367630397 0.20578581787649797 1.0 ['ENST00000593149.5_1_19:39109743-39110988:+|nuORF'] 2311 4083 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 20.832 2 -0.6888570965945418 0.20580692434511816 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 87737 19034 QVESVQLKV True PC9_epitope_Rep3 1028.5866099165999 1028.58607496793 78.435 1 -0.6888679962446297 0.20580692434511816 1.0 ['ENST00000492185.5_1_6:31920080-31921650:-|nuORF', 'ENST00000488426.5_1_6:31920080-31922695:-|nuORF', 'nc|ENSG00000204356|P18615-4|NELFE', 'ENSG00000204356|ENST00000375429|NELFE', 'nc|ENSG00000204356|P18615-3|NELFE'] 118074 16291 VATVNTIL True PC9_epitope_Rep5 829.49091862661 829.48982993586 67.657 2 -0.6888833788432184 0.20580692434511816 1.0 ['ENST00000307729.11_1_10:21903809-21906041:+|nuORF'] 135791 6247 YENFRQWQRYK True NCI_RA007_Epitope_Rep1 1616.7848092125198 1616.78317490379 28.333 3 -0.6889769955451656 0.2058190477644293 1.0 ['WHSC1L1-C15orf55|1|fusion', 'nc|ENSG00000184507|Q86Y26|NUTM1', 'nc|ENSG00000184507|Q86Y26-3|NUTM1', 'ENSG00000184507|ENST00000537011|NUTM1', 'NUTM1|p.F279Lfs*2|1|0.22|ENSG00000184507|chr15:34350813-34350814|TT/-|frameshift_variant', 'NUTM1|p.L308Cfs*7|1|0.44|ENSG00000184507|chr15:34353802-34353802|C/-|frameshift_variant', 'nc|ENSG00000184507|Q86Y26-2|NUTM1'] 3205 5958 AGERASLLY True H1975_Epitope_Rep3 978.5134449763398 978.51234993586 27.929 2 -0.689000725095417 0.205828028880646 1.0 ['DNAH17|p.A3655G|1|0.3|ENSG00000187775|chr17:78450330-78450330|G/C|missense_variant'] 133619 962 WKERILKAK True NCI_RA007_Epitope_Rep1 1170.7237125260997 1170.7220549037902 5.0929 3 -0.6890288636962041 0.205828028880646 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 12535 9555 DLASSSRLDR True PC9_epitope_Rep2 1118.5679997303398 1118.5669099358602 42.099 2 -0.6890458126276532 0.20585541580168518 1.0 ['nc|ENSG00000138892|A6PVC2|TTLL8', 'ENSG00000138892|ENST00000433387|TTLL8'] 16741 6068 EEYEYMNRRRR True PC9_epitope_Rep4 1600.75285746124 1600.75120490379 30.34 3 -0.6890768669507554 0.2058675377406011 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 81836 7973 PSGSNVDTL True PC9_epitope_Rep5 888.41887588516 888.41776993586 35.607 2 -0.6891060312537874 0.20587965930946056 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 113247 4437 TQEEDEEEEES True H1975_Epitope_Rep2 1352.4739437012797 1352.47228490379 22.178 3 -0.6891347213084412 0.20590704418835382 1.0 ['ENSG00000106246|ENST00000292478|PTCD1'] 127463 19514 VQSPRGRW True PC9_epitope_Rep4 984.5253470727198 984.52424993586 83.18 2 -0.6891902247911605 0.20591916478417485 1.0 ['ENST00000367511.3_1_1:184761553-184761835:-|nuORF'] 100357 9371 SLNFRKTTK True NCI_RA007_Epitope_Rep1 1093.62439240765 1093.6232899358602 40.442 2 -0.6892055595219176 0.2059312850099974 1.0 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'PRR14L|p.P1996Qfs*42|1|0.37|ENSG00000183530|chr22:31703563-31703563|G/-|frameshift_variant', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L'] 59364 6236 LGLAGAQK True H1975_Epitope_Rep3 756.4493881678001 756.44828993586 28.999 2 -0.689271066577543 0.20593397536667632 1.0 ['ENST00000360325.11_1_17:7165522-7165789:-|nuORF', 'ENSG00000236543|ENST00000430816|unknown'] 72132 12410 MREREREQRWR True H1975_Epitope_Rep1 1630.8222744337397 1630.82116993586 52.769 2 -0.6892717207284079 0.20593397536667632 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 52911 8379 KRHRLTPGA True H1975_Epitope_Rep3 1034.6097454030198 1034.60864993586 37.213 2 -0.6892755748437643 0.20593397536667632 1.0 ['FOXD4L4|p.Q208R|1|0.08|ENSG00000184659|chr9:65737768-65737768|A/G|missense_variant'] 98918 11520 SIYEDQQDKY True PC9_epitope_Rep4 1287.56191129039 1287.56026490379 52.074 3 -0.6892787876605091 0.20593397536667632 1.0 ['ENSG00000118985|ENST00000237853|ELL2', 'nc|ENSG00000118985|O00472-2|ELL2'] 74865 10412 NLQNQASLSF True PC9_epitope_Rep2 1120.5512870370399 1120.55018993586 45.372 2 -0.6893990881444415 0.2059918805897256 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 8090 19879 ATELLGLVGL True PC9_epitope_Rep4 984.5855472874398 984.58444993586 84.597 2 -0.6894821294608646 0.20601611623222024 1.0 ['ZMYM3|p.G83V|1|0.16|ENSG00000147130|chrX:71253008-71253008|C/A|missense_variant'] 113958 4192 TRKDKEESKKK True PC9_epitope_Rep6 1375.7783268497494 1375.77667490379 23.079 3 -0.689519923633486 0.20601611623222024 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 98689 5884 SIQRISSVEGR True NCI_RA007_Epitope_Rep2 1230.66804812478 1230.6669499358602 27.507 2 -0.6895895916890974 0.20604349484929416 1.0 ['OR13F1|p.L226Q|2|0.26|ENSG00000186881|chr9:104504939-104504939|T/A|missense_variant'] 7513 4318 ASELRKPIYWI True NCI_RA007_Epitope_Rep4 1374.7659712608997 1374.76432490379 22.953 3 -0.6896121181753749 0.2060556115129872 1.0 ['ENSG00000004766|ENST00000305866|VPS50', 'nc|ENSG00000004766|Q96JG6-3|VPS50'] 119859 15823 VEVSIFPV True PC9_epitope_Rep5 888.4956696538799 888.49456993586 65.854 2 -0.6896849255162447 0.20608298869168434 1.0 ['chr8:61633724-61637947|139|11.09|0.65|4.08|-|2|None,ASPH|1'] 30543 13319 GAIQIRDVSL True PC9_epitope_Rep3 1070.60840799034 1070.60730993586 56.265 2 -0.6897261570222364 0.20610407446970852 1.0 ['ENST00000591991.1_1_19:5667238-5667808:+|nuORF'] 72738 6763 MYTGGVSSLAE True H1975_Epitope_Rep3 1113.50122561013 1113.50012993586 30.968 2 -0.689727008413638 0.20610407446970852 1.0 ['nc|ENSG00000243156|Q7RTP6-5|MICAL3'] 58897 13449 LFTTEMLMKI True PC9_epitope_Rep5 1225.6450533928498 1225.64341490379 56.747 3 -0.6897496051393627 0.20610407446970852 1.0 ['CACNA1S|p.M483I|1|0.1|ENSG00000081248|chr1:201078049-201078049|C/A|missense_variant'] 124775 10132 VLKSELNI True NCI_RA007_Epitope_Rep2 914.54368247546 914.54258993586 44.0 2 -0.6897534114938881 0.20611304400903374 1.0 ['CNTNAP4|p.Q1296K|1|0.25|ENSG00000152910|chr16:76558642-76558642|C/A|missense_variant', 'nc|ENSG00000152910|Q9C0A0-2|CNTNAP4', 'ENSG00000152910|ENST00000611870|CNTNAP4'] 112816 16876 TPLTGNAATEE True PC9_epitope_Rep4 1102.51423282198 1102.5131299358602 72.894 2 -0.689762026993316 0.20611304400903374 1.0 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 111470 15457 TLLGLLHG True PC9_epitope_Rep3 822.4963383602201 822.49524993586 64.608 2 -0.6898293029978958 0.20616464484626534 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2', 'nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1'] 28235 6062 FRSATTSGAPG True PC9_epitope_Rep1 1050.50942222506 1050.50832993586 28.131 2 -0.6898644994233986 0.20616464484626534 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 133721 24498 WLKKILLLL True H1975_Epitope_Rep1 1138.7841875243398 1138.78308993586 101.53 2 -0.689875359168589 0.20616464484626534 1.0 ['ENST00000433031.1_1_7:57216973-57217525:-|nuORF'] 5942 5738 APIFC[Carbamidomethyl]C[Carbamidomethyl]TLP True H1975_Epitope_Rep3 1077.49872407119 1077.49762993586 27.1 2 -0.6899489225748647 0.2061767578125 1.0 ['ENST00000379644.8_2_8:43046729-43048925:+|nuORF'] 140186 13285 YVVDFLTEENK True NCI_RA007_Epitope_Rep1 1355.6608970556697 1355.65980993586 55.676 2 -0.6900858565591125 0.20621624095944338 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 18 18931 AAAAAGLGLGP True PC9_epitope_Rep1 867.4814165720699 867.4808649679301 77.603 1 -0.6901073949227982 0.20621624095944338 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 48722 8399 KENFQEYTEK True H1975_Epitope_Rep1 1314.6091958359796 1314.60808993586 37.234 2 -0.6901411566745363 0.20622835258395764 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 133364 3811 WFHFKRYRYRR True NCI_RA007_Epitope_Rep2 1713.9116814914898 1713.91003490379 19.458 3 -0.6902525097550782 0.20626468523999877 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 103879 15290 SRLFYKVAS True PC9_epitope_Rep4 1069.5920296502097 1069.59092993586 66.742 2 -0.6903127883426221 0.20626468523999877 1.0 ['nc|ENSG00000142303|Q9H324|ADAMTS10', 'ENSG00000142303|ENST00000597188|ADAMTS10', 'ENST00000593534.1_1_19:8669890-8670235:-|nuORF'] 4919 13242 ALGTALKVVG True PC9_epitope_Rep1 927.5753169569099 927.57420993586 55.801 2 -0.6903213310954831 0.20626468523999877 1.0 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant'] 14215 11370 DSVLSLVHVK True NCI_RA007_Epitope_Rep2 1095.62880908175 1095.6277099358601 48.814 2 -0.6903322126254147 0.206276795386235 1.0 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3'] 48686 5774 KEMEFLDIT True H1975_Epitope_Rep2 1124.5423621461198 1124.54126993586 27.205 2 -0.6903530912682373 0.206288905162944 1.0 ['PLCB2|p.A1136Qfs*3|1|0.32|ENSG00000137841|chr15:40288867-40288867|C/-|frameshift_variant', 'nc|ENSG00000137841|Q00722-3|PLCB2', 'nc|ENSG00000137841|Q00722-2|PLCB2', 'ENSG00000137841|ENST00000260402|PLCB2', 'ENST00000558588.5_1_15:40583969-40599873:-|nuORF'] 89869 9211 RFLYQSSSAS True NCI_RA007_Epitope_Rep2 1144.55128703704 1144.55077496793 40.439 1 -0.6903664740495529 0.20629786714673665 1.0 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2'] 13026 7357 DLQRRLFFFIR True NCI_RA007_Epitope_Rep4 1509.8568519539697 1509.85574993586 34.939 2 -0.6903669728905077 0.20629786714673665 1.0 ['ENST00000177742.7_1_16:1822507-1822845:-|nuORF'] 59935 11102 LHLDSLISKNI True PC9_epitope_Rep2 1251.71868671531 1251.71704490379 48.027 3 -0.6904971784624481 0.20634048850443193 1.0 ['ENST00000505330.5_1_3:130569614-130569746:+|nuORF'] 138011 18375 YQCRYEEL True PC9_epitope_Rep2 1102.4753452154598 1102.4742499358601 76.009 2 -0.6905304495747429 0.20638310856166472 1.0 ['ENSG00000161850|ENST00000257974|KRT82', 'CON__Q9NSB4'] 102408 8227 SPVVPAPR True PC9_epitope_Rep5 821.47593726881 821.47484993586 36.584 2 -0.6906084387399439 0.20640732265446224 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 119862 18685 VEVSLGLPAL True PC9_epitope_Rep3 996.5855472874398 996.58444993586 77.092 2 -0.6906130023201783 0.20640732265446224 1.0 ['ENST00000441394.1_1_13:30881052-30881121:-|nuORF'] 120347 6688 VFPSHEDIR True NCI_RA007_Epitope_Rep4 1098.54580773378 1098.54470993586 32.35 2 -0.6906283561908858 0.20641942914677122 1.0 ['ENST00000344204.8_1_5:14509145-14509322:+|nuORF'] 131264 25593 VVQEPRRII True PC9_epitope_Rep1 1108.67167695324 1108.6705699358602 103.46 2 -0.6906667186540029 0.20646105976022697 1.0 ['ENSG00000169071|ENST00000375708|ROR2'] 38936 16812 HIPSTIAV True PC9_epitope_Rep3 836.47560291564 836.4745099358599 69.817 2 -0.6906692347526981 0.20646105976022697 1.0 ['CASR|p.E133Q|1|0.2|ENSG00000036828|chr3:122257292-122257292|G/C|missense_variant', 'ENSG00000036828|ENST00000639785|CASR', 'nc|ENSG00000036828|P41180-2|CASR'] 54503 8943 LAADPSHP True PC9_epitope_Rep1 806.3922672145 806.39116993586 39.24 2 -0.6906759026963609 0.20646105976022697 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 59371 21060 LGLDRKMVT True PC9_epitope_Rep5 1031.57975071435 1031.57864993586 86.067 2 -0.6906823609921627 0.20646105976022697 1.0 ['ENSG00000120256|ENST00000239367|LRP11'] 1251 8888 AEDMWLAGY True H1975_Epitope_Rep2 1054.4429824580197 1054.4418899358602 39.158 2 -0.6906876808272305 0.20646105976022697 1.0 ['ENST00000454838.6_1_11:869018-869621:-|nuORF'] 19175 12290 ELKFHYMV True PC9_epitope_Rep5 1065.53173789277 1065.53064993586 52.263 2 -0.69069888061976 0.20646105976022697 1.0 ['ENSG00000167515|ENST00000696289|TRAPPC2L', 'nc|ENSG00000167515|Q9UL33|TRAPPC2L', 'ENST00000564547.1_1_16:88923507-88925305:+|nuORF', 'ENST00000561840.1_2_16:88923580-88926055:+|nuORF'] 66661 4577 LSSSSHGVP True PC9_epitope_Rep4 869.42429561877 869.42318993586 24.102 2 -0.6906996307808965 0.20646105976022697 1.0 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 110713 18733 TKDILINFL True PC9_epitope_Rep4 1075.62774645259 1075.62717496793 80.138 1 -0.6907552789240434 0.20646105976022697 1.0 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL', 'ENST00000463899.5_1_1:182781291-182795122:+|nuORF', 'nc|ENSG00000135838|Q9BXD5-4|NPL', 'nc|ENSG00000135838|Q9BXD5-3|NPL'] 55865 14509 LDFLIIDKHE True H1975_Epitope_Rep1 1241.6655885132898 1241.66448993586 61.011 2 -0.6907722354671951 0.20646105976022697 1.0 ['ENST00000397042.7_1_20:37204556-37204643:+|nuORF'] 117913 11002 VAQLKFYSA True PC9_epitope_Rep1 1025.5545815123298 1025.5534899358602 47.207 2 -0.690784843197577 0.20646105976022697 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 42261 18227 IEHSQAFVL True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 82.752 2 -0.690785284307494 0.20646105976022697 1.0 ['ENST00000356978.8_1_14:90871354-90871483:+|nuORF'] 6758 8252 AQELQGHVSII True H1975_Epitope_Rep1 1193.64043639461 1193.6393299358601 36.681 2 -0.6908362752177117 0.20650366822750638 1.0 ['ENSG00000049239|ENST00000377403|H6PD', 'nc|ENSG00000049239|O95479-2|H6PD'] 41400 16977 IARGRRKP True H1975_Epitope_Rep2 952.6042660997599 952.60316993586 70.55 2 -0.6909113368231904 0.20653102312244526 1.0 ['ENST00000273920.7_1_4:83351753-83351975:+|nuORF'] 93665 8319 RTGWVYRNV True PC9_epitope_Rep2 1149.60432566941 1149.60268490379 37.364 3 -0.6909697775597622 0.20653997498703597 1.0 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'nc|ENSG00000111906|Q7Z4H3-3|HDDC2', 'ENST00000609574.1_1_6:125621682-125623108:-|nuORF'] 39942 8167 HQNVAQLSL True NCI_RA007_Epitope_Rep3 1008.53524305008 1008.53414993586 39.244 2 -0.690970621623172 0.20653997498703597 1.0 ['ENSG00000149781|ENST00000345728|FERMT3', 'nc|ENSG00000149781|Q86UX7|FERMT3'] 32883 20836 GILSFGYSS True PC9_epitope_Rep5 929.4494477374501 929.44834993586 85.194 2 -0.6909887421088164 0.20655207650189883 1.0 ['ENST00000543845.1_12:9099387-9102125:-|nuORF', 'ENST00000544245.1_12:9098881-9102125:-|nuORF', 'ENST00000540837.1_12:9098881-9102125:-|nuORF'] 136096 10797 YGDTLAAI True H1975_Epitope_Rep3 822.4123339527399 822.4117849679301 46.61 1 -0.6909952884998052 0.206564177647633 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 46067 6980 ISYCKDIPSF True NCI_RA007_Epitope_Rep2 1171.5583465634297 1171.55724993586 31.773 2 -0.691042847988354 0.20664938233948452 1.0 ['nc|ENSG00000165521|Q05BV3|EML5', 'ENSG00000165521|ENST00000554922|EML5'] 122702 9470 VGTVADLF True NCI_RA007_Epitope_Rep3 820.43306939732 820.43196993586 44.352 2 -0.6910478259840105 0.20664938233948452 1.0 ['nc|ENSG00000138115|P10632-2|CYP2C8', 'ENST00000526814.5_1_10:96796887-96827187:-|nuORF', 'ENSG00000138115|ENST00000371270|CYP2C8'] 16743 6447 EEYEYMNRRRR True PC9_epitope_Rep4 1600.75285746124 1600.75120490379 31.895 3 -0.6910594936261709 0.20665832977490392 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 119708 19128 VETENKFSF True PC9_epitope_Rep5 1099.51858992643 1099.51748993586 78.61 2 -0.69110481979756 0.20665832977490392 1.0 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 24526 23865 FAKLHRRCV True NCI_RA007_Epitope_Rep2 1128.63385197588 1128.6322049037901 100.2 3 -0.6911136114798249 0.20666727666453166 1.0 ['ENST00000394221.2_1_3:93780266-93781735:-|nuORF'] 27622 12798 FPWAMQQQL True PC9_epitope_Rep3 1147.54845058607 1147.5473499358602 54.248 2 -0.6911326743573968 0.20666727666453166 1.0 ['ENST00000409185.5_1_2:131810576-131840200:-|nuORF'] 99746 4548 SLGKKDKE True PC9_epitope_Rep6 903.5025459394699 903.50144993586 24.75 2 -0.6911791800513996 0.2066762230084177 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'ENST00000342835.8_1_14:65216026-65230503:-|nuORF'] 43856 15398 ILCWYIYLVWY True H1975_Epitope_Rep1 1533.77303078729 1533.77192993586 64.498 2 -0.6911965526313107 0.2066762230084177 1.0 ['ENST00000334955.12_1_7:77409008-77409110:+|nuORF'] 60299 10063 LIETGQGL True H1975_Epitope_Rep2 829.4545331178899 829.45342993586 43.699 2 -0.6912643262222615 0.20667886550777675 1.0 ['ENST00000393077.2_1_10:114576537-114576684:+|nuORF'] 57216 14064 LEEYFKYDP True PC9_epitope_Rep1 1202.54955570154 1202.5484499358602 58.936 2 -0.6912714437955964 0.20667886550777675 1.0 ['nc|ENSG00000290445|Q5T2Q4|CCNYL2'] 62695 21201 LLWRLWEERER True H1975_Epitope_Rep3 1584.8524948495199 1584.8513899358602 88.551 2 -0.6912735769369396 0.20667886550777675 1.0 ['ENST00000493723.5_1_7:24756537-24789393:-|nuORF'] 134213 7224 WRQRWRFSRRS True NCI_RA007_Epitope_Rep1 1619.8657939282298 1619.86414490379 32.089 3 -0.6912829732432265 0.20667886550777675 1.0 ['ENST00000555540.1_1_14:35981656-35982271:-|nuORF'] 98458 17015 SIKIKMRNNRK True NCI_RA007_Epitope_Rep1 1386.8241719267 1386.82306993586 70.313 2 -0.6913168632454217 0.20671830685249 1.0 ['ENST00000485726.1_1_7:103828364-103848439:-|nuORF'] 57523 14688 LEKRNYCSL True PC9_epitope_Rep4 1124.5648289261999 1124.56372993586 64.432 2 -0.6913379604157983 0.20671830685249 1.0 ['WHSC1L1-C15orf55|1|fusion', 'nc|ENSG00000184507|Q86Y26|NUTM1', 'nc|ENSG00000184507|Q86Y26-3|NUTM1', 'ENSG00000184507|ENST00000537011|NUTM1'] 138512 7821 YRKMKERL True NCI_RA007_Epitope_Rep4 1122.6331832695398 1122.6315449037902 36.773 3 -0.6913574725611323 0.20673040269582058 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 33295 12856 GLATHPSL True PC9_epitope_Rep1 794.42865272322 794.42754993586 54.325 2 -0.69141313229399 0.2067482885327885 1.0 ['EML2|p.R389L|1|0.4|ENSG00000125746|chr19:45619148-45619148|C/A|missense_variant'] 55734 14224 LDDSALYLSDK True PC9_epitope_Rep3 1238.60304782638 1238.6019499358601 59.798 2 -0.6914500372818683 0.2067482885327885 1.0 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 67067 9099 LTAVSQPRPF True H1975_Epitope_Rep1 1114.6134933707797 1114.6123899358602 39.903 2 -0.6914818353308126 0.2067482885327885 1.0 ['ENST00000589137.5_1_19:36032868-36032973:-|nuORF'] 12134 20255 DIILQNLVEL True H1975_Epitope_Rep1 1168.67033954056 1168.66924993586 84.258 2 -0.6915444363801088 0.2067482885327885 1.0 ['nc|ENSG00000167881|Q9UHB9-4|SRP68', 'ENSG00000167881|ENST00000307877|SRP68', 'nc|ENSG00000167881|Q9UHB9-2|SRP68', 'nc|ENSG00000167881|Q9UHB9-3|SRP68', 'ENST00000588736.1_1_17:74041371-74044231:-|nuORF'] 123807 24641 VITLTELTLI True PC9_epitope_Rep4 1114.68492697554 1114.68382993586 103.27 2 -0.6916003719213281 0.20677247709219534 1.0 ['ENST00000374721.7_1_10:35500449-35500728:+|nuORF'] 95634 7423 SAVIDEFVGD True NCI_RA007_Epitope_Rep3 1050.48695544498 1050.4858499358602 36.324 2 -0.6916244322650271 0.20677247709219534 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 123078 10647 VHALNNVL True PC9_epitope_Rep4 878.49740098938 878.49630993586 48.704 2 -0.6917802291469693 0.20682084978580031 1.0 ['ENST00000595718.1_1_19:51013541-51014395:-|nuORF', 'nc|ENSG00000161677|Q8TAC2-2|JOSD2', 'ENSG00000161677|ENST00000598418|JOSD2'] 100591 12888 SLQFPWPL True PC9_epitope_Rep5 986.5225531080598 986.52144993586 54.584 2 -0.6917814811683125 0.20682084978580031 1.0 ['ENST00000448876.5_1_3:185009604-185009661:+|nuORF'] 112467 9395 TNQIKQKFGLT True H1975_Epitope_Rep1 1276.7139356880398 1276.71282993586 41.049 2 -0.6918249694694414 0.20682084978580031 1.0 ['PLEKHA1-BTBD16|1|fusion', 'ENSG00000138152|ENST00000260723|BTBD16', 'nc|ENSG00000138152|Q32M84-2|BTBD16'] 62751 9247 LLYYSRTMAK True NCI_RA007_Epitope_Rep2 1244.65872931104 1244.65762993586 40.58 2 -0.6918464956296269 0.20682084978580031 1.0 ['nc|ENSG00000232388|A0A096LP01-2|SMIM26', 'ENSG00000232388|ENST00000411646|SMIM26'] 134227 25344 WRRKALRRNPS True PC9_epitope_Rep5 1438.8381821980597 1438.8370899358601 102.69 2 -0.691859362777505 0.20682348278122475 1.0 ['ENSG00000133980|ENST00000256362|VRTN'] 38329 5591 HFWRFGEWVD True PC9_epitope_Rep5 1377.6254550368099 1377.62380490379 26.508 3 -0.6918719796307388 0.20682348278122475 1.0 ['ENSG00000149260|ENST00000648180|CAPN5', 'ENST00000533889.1_1_11:76804778-76823844:+|nuORF'] 20319 12113 EPELCQKLP True PC9_epitope_Rep6 1055.53213181559 1055.53102993586 57.934 2 -0.6919535202751796 0.20682348278122475 1.0 ['ENSG00000164342|ENST00000296795|TLR3'] 106759 9266 SYFGSILTT True NCI_RA007_Epitope_Rep1 987.49131254943 987.4907649679301 40.041 1 -0.6919547662985902 0.20682348278122475 1.0 ['ENST00000504669.5_1_5:52201585-52248278:+|nuORF', 'ENSG00000213949|ENST00000282588|ITGA1'] 63086 13600 LNMERNNRYQP True PC9_epitope_Rep1 1433.68338091909 1433.6822899358601 57.169 2 -0.6919793429304614 0.20683242122593332 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|11|1|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|7|1|sense'] 68614 14933 LTYWPQKYWAV True PC9_epitope_Rep2 1453.73942215989 1453.73832993586 62.699 2 -0.692070841185343 0.20683242122593332 1.0 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'nc|ENSG00000185808|P57054-3|PIGP'] 78428 4231 PCACCCCC True PC9_epitope_Rep5 804.15555102552 804.15444993586 21.347 2 -0.6920926435387872 0.2068413591256231 1.0 ['ENSG00000063515|ENST00000086933|GSC2'] 26935 15747 FLHKFWFF True PC9_epitope_Rep5 1170.6014721351 1170.59983490379 65.571 3 -0.6921135469464547 0.2068413591256231 1.0 ['nc|ENSG00000168216|Q9NUN5-3|LMBRD1', 'ENSG00000168216|ENST00000649934|LMBRD1'] 98728 18115 SIRRVYTRL True NCI_RA007_Epitope_Rep3 1162.69347502698 1162.69183490379 79.378 3 -0.6921439293642393 0.20685344958995153 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 52637 9489 KQEFQDAR True PC9_epitope_Rep3 1020.4988575413598 1020.49776993586 41.448 2 -0.6921991743380596 0.20685608023656374 1.0 ['CYBB|p.W380R|1|0.16|ENSG00000165168|chrX:37804117-37804117|T/C|missense_variant'] 111692 11390 TLPPEKLPW True NCI_RA007_Epitope_Rep3 1079.6015317047497 1079.6004299358601 51.924 2 -0.6922234622688795 0.20685608023656374 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 128915 5360 VSTLTPAL True H1975_Epitope_Rep1 800.4643695255999 800.46326993586 25.674 2 -0.6922511294316144 0.20685608023656374 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.S7527C|1|0.15|ENSG00000181143|chr19:8954190-8954190|G/C|missense_variant'] 70421 18559 LYQYHAVL True PC9_epitope_Rep1 1005.5283667644899 1005.52726993586 76.174 2 -0.6922573989248092 0.20685608023656374 1.0 ['chr11:102374933-102377496|150|10.29|0.03|8.55|+|2|TE_info:L1PA2,L1PA2_dup3799,L1,LINE,donor,-,102369167,102374933|None,BIRC2|15'] 12882 24017 DLLPLSLIPV True PC9_epitope_Rep1 1078.66379760814 1078.66327496793 97.19 1 -0.692272204174438 0.20685871056241426 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2', 'PAN2|p.R449Qfs*16|1|0.09|ENSG00000135473|chr12:56326327-56326328|-/G|frameshift_variant'] 90802 12303 RKRWHRWQDHH True H1975_Epitope_Rep3 1640.82974277268 1640.82864993586 52.504 2 -0.6923041399124064 0.20685871056241426 1.0 ['nc|ENSG00000106113|Q13324-3|CRHR2', 'nc|ENSG00000106113|Q13324-7|CRHR2', 'ENSG00000106113|ENST00000471646|CRHR2', 'nc|ENSG00000106113|Q13324-2|CRHR2'] 46432 19937 ITLIWCLAL True PC9_epitope_Rep2 1044.60417455704 1044.60306993586 82.084 2 -0.6923057021024734 0.20685871056241426 1.0 ['nc|ENSG00000205268|Q13946-2|PDE7A'] 40908 5894 HVSSYAAFV True PC9_epitope_Rep4 979.4763311916299 979.4752299358599 29.57 2 -0.6923096661516805 0.20685871056241426 1.0 ['HLA-DPA1|p.T39S|1|0.26|ENSG00000231389|chr6:33069872-33069872|T/A|missense_variant'] 99782 5997 SLGQFMKA True NCI_RA007_Epitope_Rep5 880.4476739156398 880.44656993586 29.751 2 -0.6923508743907156 0.20687079910380882 1.0 ['ENSG00000130821|ENST00000253122|SLC6A8', 'ENST00000476466.1_1_X:152954203-152956038:+|nuORF', 'chrX:153688836-153690438|145|33.63|0.68|5.63|+|2|SLC6A8,None|1'] 65456 20545 LSFDGQIFLL True PC9_epitope_Rep4 1151.62266107215 1151.6215699358602 87.178 2 -0.6923783857925963 0.20688288727671766 1.0 ['nc|ENSG00000203722|Q6H3X3-2|RAET1G', 'ENSG00000203722|ENST00000367360|RAET1G'] 19038 12817 ELGMIADA True PC9_epitope_Rep5 818.3844049527399 818.38330993586 54.311 2 -0.6924212810584123 0.2068949750811577 1.0 ['TKFC|p.I279M|1|0.05|ENSG00000149476|chr11:61342816-61342816|C/G|missense_variant'] 133806 25269 WLRRLILELLK True PC9_epitope_Rep6 1451.9340396455098 1451.93239490379 112.54 3 -0.6924462595332019 0.20693754381686835 1.0 ['MTOR|p.S1288I|1|0.12|ENSG00000198793|chr1:11204642-11204642|C/A|missense_variant'] 122113 7033 VGRGGKSR True PC9_epitope_Rep5 815.47258322387 815.47148993586 32.021 2 -0.692478762440928 0.2069496304198735 1.0 ['ENST00000253251.12_1_1:10093057-10093417:+|nuORF'] 105533 15543 SVDPKATSV True PC9_epitope_Rep2 902.4709114580199 902.46980993586 65.058 2 -0.6925239916565108 0.20696171665447452 1.0 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'ENST00000479356.1_1_17:71354047-71433905:-|nuORF'] 122133 17779 VGRHQRGR True NCI_RA007_Epitope_Rep1 964.5427284723598 964.54217496793 73.295 1 -0.6925676512587176 0.2069890424737492 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 78754 5974 PEHAPRTSPSP True H1975_Epitope_Rep3 1174.5730851107799 1174.57198993586 27.991 2 -0.6926142648469178 0.20701005790917404 1.0 ['ENST00000494191.6_1_1:17280548-17280737:+|nuORF'] 19759 12048 ELSVDHSDP True H1975_Epitope_Rep2 997.43525422529 997.43414993586 51.422 2 -0.6926581256935964 0.20701005790917404 1.0 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'nc|ENSG00000105388|P06731-2|CEACAM5'] 127381 11766 VQQEACAQ True H1975_Epitope_Rep3 875.3807165546298 875.38016496793 50.403 1 -0.6926615283317271 0.20701005790917404 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'ARHGEF40|p.A737Pfs*3|1|0.38|ENSG00000165801|chr14:21078445-21078445|G/-|frameshift_variant'] 40504 6880 HSFHMGYSMAI True NCI_RA007_Epitope_Rep4 1279.5477989630701 1279.54615490379 33.081 3 -0.6927135502327604 0.2070310714231291 1.0 ['ENSG00000177917|ENST00000326446|ARL6IP6'] 134334 19469 WRWSRAVP True PC9_epitope_Rep3 1056.5617325814399 1056.56062993586 80.116 2 -0.6927570967744493 0.2070310714231291 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 90803 12394 RKRWHRWQDHH True H1975_Epitope_Rep3 1640.82974277268 1640.82864993586 52.862 2 -0.692760590298129 0.2070310714231291 1.0 ['nc|ENSG00000106113|Q13324-3|CRHR2', 'nc|ENSG00000106113|Q13324-7|CRHR2', 'ENSG00000106113|ENST00000471646|CRHR2', 'nc|ENSG00000106113|Q13324-2|CRHR2'] 59102 15798 LGEFVDDYTV True PC9_epitope_Rep5 1156.5288202569598 1156.5277299358602 65.755 2 -0.6927699148852728 0.20704315494331343 1.0 ['ENSG00000115233|ENST00000409682|PSMD14'] 63922 14315 LPWARELESRE True PC9_epitope_Rep5 1384.70991293676 1384.70880993586 60.065 2 -0.6928284252914362 0.2070552380952381 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 134419 11616 WTEIFKEHNFR True H1975_Epitope_Rep3 1505.7415474182096 1505.7404499358602 49.812 2 -0.6928351202471426 0.20706732087891994 1.0 ['FLT3|p.S724R|2|0.27|ENSG00000122025|chr13:28027123-28027123|A/T|missense_variant'] 14692 5908 DVPGPTALAP True H1975_Epitope_Rep2 936.4916469025999 936.49054993586 27.711 2 -0.692951339358028 0.20710672274029376 1.0 ['ENST00000367112.1_2_6:158500311-158517393:+|nuORF', 'nc|ENSG00000078269|O15056-2|SYNJ2', 'ENSG00000078269|ENST00000355585|SYNJ2', 'nc|ENSG00000078269|O15056-3|SYNJ2'] 92555 16320 RRAPLGAA True H1975_Epitope_Rep1 810.4824196315799 810.48132993586 68.131 2 -0.6929590818692528 0.20710672274029376 1.0 ['ENST00000268893.10_1_17:56393882-56399727:-|nuORF'] 4850 19731 ALFPVPEGAP True PC9_epitope_Rep1 996.5280324113198 996.52692993586 80.723 2 -0.6930183311829673 0.20711880418717335 1.0 ['nc|ENSG00000185787|Q9UBU8|MORF4L1'] 103182 21000 SQPLHYTHI True PC9_epitope_Rep1 1094.5508931142201 1094.5497899358602 85.603 2 -0.6931361718480248 0.20714296597644405 1.0 ['OR4D5|p.L134H|1|0.31|ENSG00000171014|chr11:123940017-123940017|T/A|missense_variant'] 38403 13012 HGLEEYVRK True PC9_epitope_Rep5 1129.58800689893 1129.58635490379 55.058 3 -0.6931399362016879 0.20714296597644405 1.0 ['ENST00000478090.5_1_2:99689501-99743552:-|nuORF', 'ENST00000476849.5_1_2:99733658-99743552:-|nuORF', 'ENST00000489926.6_1_2:99725972-99757602:-|nuORF'] 63328 14640 LPDRVATSRI True PC9_epitope_Rep5 1126.64585612822 1126.64422490379 61.313 3 -0.6932580614443524 0.2072306778189131 1.0 ['ENSG00000106723|ENST00000375859|SPIN1'] 133679 19237 WKWFKHIIRFI True NCI_RA007_Epitope_Rep4 1572.9081592508398 1572.90652490379 83.173 3 -0.6932771164602197 0.2072306778189131 1.0 ['ENST00000409175.5_1_2:160599702-160602296:+|nuORF'] 11083 13554 DEAESWIKEK True H1975_Epitope_Rep3 1233.5877321154096 1233.5866299358602 57.417 2 -0.6933165761718441 0.2072306778189131 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 37279 4723 GVVNRSQKDI True PC9_epitope_Rep4 1114.6094706195 1114.60836993586 24.714 2 -0.6933173924483507 0.2072306778189131 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3', 'ENST00000591701.5_1_19:10887861-10906203:+|nuORF', 'nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 92932 23998 RRPLLRALF True PC9_epitope_Rep3 1140.7243812324398 1140.72274490379 97.596 3 -0.6933186633323165 0.2072306778189131 1.0 ['ENST00000527418.5_1_1:155023541-155024009:+|nuORF'] 63921 12935 LPWARELESRE True PC9_epitope_Rep4 1384.70991293676 1384.70880993586 57.64 2 -0.6933213556889327 0.2072306778189131 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 77916 8880 PAIARPQAL True PC9_epitope_Rep3 935.5552502186698 935.55414993586 39.106 2 -0.6933519862249072 0.20725483325461996 1.0 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-3|NPC1L1'] 92192 12081 RQGHYIMVK True PC9_epitope_Rep5 1130.6018831412598 1130.6002349037901 51.464 3 -0.6933616997806158 0.20725483325461996 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|30|1|sense'] 20774 8244 EQLRCHFTWE True NCI_RA007_Epitope_Rep2 1347.6030053400698 1347.60190993586 36.704 2 -0.6933985241843068 0.20728214503351614 1.0 ['ENSG00000185745|ENST00000371804|IFIT1'] 2313 4270 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 21.541 2 -0.6933988066438638 0.2072942215993053 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 33286 8127 GLASPRPLQ True PC9_epitope_Rep1 937.53451477409 937.53340993586 36.089 2 -0.693514972875086 0.207315215404302 1.0 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3', 'SHANK3|p.G508Afs*16|1|0.35|ENSG00000251322|chr22:50698734-50698734|G/-|frameshift_variant'] 64106 10413 LQEEEPQRQR True NCI_RA007_Epitope_Rep1 1311.6531263366298 1311.6520299358601 44.488 2 -0.6935483557240133 0.207315215404302 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 123523 12021 VIIDDHPEV True PC9_epitope_Rep4 1035.52367530687 1035.52256993586 54.039 2 -0.693571536177679 0.207315215404302 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 84361 16672 QGAGSVLF True PC9_epitope_Rep1 777.40210362221 777.40100993586 68.958 2 -0.6936734499432895 0.2073698321299089 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 108479 6642 TEETATTVVA True H1975_Epitope_Rep2 1020.4975201286799 1020.49642993586 30.456 2 -0.6936772516538332 0.2073698321299089 1.0 ['nc|ENSG00000162298|Q86TM6-2|SYVN1', 'nc|ENSG00000162298|Q86TM6-3|SYVN1', 'ENSG00000162298|ENST00000377190|SYVN1', 'ENST00000449943.5_1_11:64895819-64896227:-|nuORF'] 22455 11820 ETGTRVGVVQY True H1975_Epitope_Rep2 1207.6197009500297 1207.6186099358601 50.542 2 -0.6937830674857203 0.20737874725810382 1.0 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 25608 8927 FETFYQRFRHF True PC9_epitope_Rep1 1576.75753183552 1576.75588490379 39.18 3 -0.6937853087577021 0.20737874725810382 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.S226Ffs*19|1|0.13|ENSG00000196652|chr7:99520207-99520208|-/T|frameshift_variant'] 32887 17249 GILSVDLL True PC9_epitope_Rep5 828.49566965388 828.49456993586 71.362 2 -0.6937974935561344 0.2073845029017075 1.0 ['ENSG00000211448|ENST00000438257|DIO2', 'nc|ENSG00000211448|Q92813-2|DIO2', 'ENST00000438257.8_2_14:80669457-80677836:-|nuORF'] 104648 5625 SSYPVCVSK True NCI_RA007_Epitope_Rep3 968.4637179026 968.46262993586 29.116 2 -0.6938019991503095 0.2073845029017075 1.0 ['nc|ENSG00000089127|P00973-4|OAS1', 'nc|ENSG00000089127|P00973-2|OAS1', 'ENSG00000089127|ENST00000202917|OAS1', 'nc|ENSG00000089127|P00973-3|OAS1', 'ENST00000549820.1_1_12:113344820-113354315:+|nuORF'] 80214 11937 PLALLGGLTA True PC9_epitope_Rep5 924.56441792004 924.56332993586 50.913 2 -0.6938140802771059 0.2073845029017075 1.0 ['ENSG00000270806|ENST00000605587|C17orf50'] 82666 19783 PVLYAMLDHS True PC9_epitope_Rep4 1144.5586809166 1144.55758993586 84.222 2 -0.693856629258056 0.20740864850044932 1.0 ['ENST00000476410.1_1_1:161275668-161275791:-|nuORF', 'ENSG00000158887|ENST00000533357|MPZ', 'nc|ENSG00000158887|P25189-2|MPZ'] 27174 14361 FLSKDDNV True PC9_epitope_Rep5 936.4552613938799 936.45416993586 60.24 2 -0.6938643217738173 0.20740864850044932 1.0 ['ENSG00000117501|ENST00000367759|MROH9'] 118496 12570 VDSLETCQKLE True PC9_epitope_Rep1 1263.60166792739 1263.6005699358602 53.219 2 -0.6938845065862547 0.2074175614956972 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'SENP7|p.C683Ffs*13|1|0.29|ENSG00000138468|chr3:101343744-101343744|C/-|frameshift_variant'] 134418 11600 WTEIFKEHNFR True H1975_Epitope_Rep1 1505.7415474182096 1505.7404499358602 49.608 2 -0.6939345397163613 0.2074175614956972 1.0 ['FLT3|p.S724R|2|0.27|ENSG00000122025|chr13:28027123-28027123|A/T|missense_variant'] 72821 10977 NAKRYYKW True PC9_epitope_Rep4 1127.5876129761098 1127.58595490379 49.997 3 -0.6939948032951557 0.2074264739479416 1.0 ['ZNF551|p.S221R|1|0.69|ENSG00000204519|chr19:57686938-57686938|T/G|missense_variant'] 77601 13862 NYTKIEQL True NCI_RA007_Epitope_Rep1 1007.5287606873098 1007.52766993586 57.939 2 -0.6940184896803194 0.2074264739479416 1.0 ['ENST00000491354.5_2_2:27245086-27245656:+|nuORF', 'ENST00000494788.1_1_2:27245086-27245308:+|nuORF', 'ENST00000481222.5_1_2:27224957-27246540:+|nuORF', 'MAPRE3|p.C182Lfs*16|2|0.26|ENSG00000084764|chr2:27025648-27025649|-/C|frameshift_variant', 'MAPRE3|p.C182Afs*31|1|0.21|ENSG00000084764|chr2:27025649-27025649|C/-|frameshift_variant', 'nc|ENSG00000084764|Q9UPY8-2|MAPRE3', 'ENSG00000084764|ENST00000233121|MAPRE3'] 86222 21240 QPYGGFLDI True PC9_epitope_Rep4 1008.4916469025999 1008.4910749679301 89.865 1 -0.6940661842007146 0.20745377562520942 1.0 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant', 'ENST00000504435.1_1_4:882633-887812:-|nuORF'] 55710 6598 LDDKGWRR True PC9_epitope_Rep1 1044.54647644012 1044.5453699358602 30.182 2 -0.6941044360841405 0.20749630667539865 1.0 ['nc|ENSG00000148384|Q9NRR6-2|INPP5E', 'ENSG00000148384|ENST00000371712|INPP5E'] 139219 9800 YSWKKNRMWRK True H1975_Epitope_Rep2 1581.83507096357 1581.83396993586 42.682 2 -0.6941215281287315 0.20750521618616835 1.0 ['ENSG00000080618|ENST00000181383|CPB2'] 44373 13653 INAQHTQRLLR True NCI_RA007_Epitope_Rep2 1348.76876522556 1348.76766993586 57.748 2 -0.6941319541437208 0.20750521618616835 1.0 ['nc|ENSG00000144852|O75469-5|NR1I2', 'nc|ENSG00000144852|O75469-2|NR1I2', 'nc|ENSG00000144852|O75469-4|NR1I2', 'nc|ENSG00000144852|O75469-6|NR1I2', 'ENSG00000144852|ENST00000393716|NR1I2', 'nc|ENSG00000144852|O75469-3|NR1I2', 'nc|ENSG00000144852|O75469-7|NR1I2'] 54507 7773 LAADPSHP True PC9_epitope_Rep4 806.3922672145 806.39116993586 37.296 2 -0.694200382899966 0.20751728549237003 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 87991 12828 QVRQGEKFLQP True NCI_RA007_Epitope_Rep2 1328.72008369764 1328.71898993586 54.516 2 -0.6942440802247987 0.20754716981132076 1.0 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4', 'ENST00000393966.1_1_16:67315041-67322708:+|nuORF'] 111441 12716 TLKSNLSL True PC9_epitope_Rep1 874.5123823471799 874.51128993586 53.784 2 -0.6942594617564708 0.20754716981132076 1.0 ['ENSG00000256087|ENST00000221315|ZNF432'] 20860 13880 EQQYRALRKYY True PC9_epitope_Rep5 1516.7786612029197 1516.7775699358601 58.409 2 -0.694262867768588 0.20754716981132076 1.0 ['nc|ENSG00000178568|Q15303-4|ERBB4', 'nc|ENSG00000178568|Q15303-3|ERBB4', 'nc|ENSG00000178568|Q15303-2|ERBB4', 'ENSG00000178568|ENST00000342788|ERBB4', 'ENST00000484594.5_1_2:212426591-213403254:-|nuORF', 'ENST00000459774.1_1_2:212989446-212989798:-|nuORF'] 64750 16772 LRRQPPRSP True H1975_Epitope_Rep2 1105.64685918773 1105.64576993586 69.752 2 -0.6942700866168555 0.20754716981132076 1.0 ['ENST00000266581.4_1_12:47472787-47473288:-|nuORF', 'ENST00000550413.1_1_12:47473000-47473288:-|nuORF'] 139722 5327 YTWRWVWSWEW True H1975_Epitope_Rep3 1683.7622828627896 1683.76063490379 25.562 3 -0.6942896325213772 0.20754716981132076 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 94343 16490 RWWRRRWNPRL True NCI_RA007_Epitope_Rep2 1680.9338139183997 1680.9327099358602 68.87 2 -0.6943924100978273 0.2076049217274776 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 75556 19429 NQLVCKMNSDP True PC9_epitope_Rep1 1247.56384295003 1247.5627499358602 79.546 2 -0.6943963467816325 0.20760750395906932 1.0 ['nc|ENSG00000122417|Q9ULJ1-3|ODF2L', 'nc|ENSG00000122417|Q9ULJ1|ODF2L'] 93030 16068 RRRGWREQRHR True NCI_RA007_Epitope_Rep1 1591.8780899474298 1591.8769899358601 66.605 2 -0.6943993249905943 0.20760750395906932 1.0 ['ENST00000568956.1_1_19:56116859-56125214:+|nuORF'] 99463 21477 SLELGPWSP True PC9_epitope_Rep3 984.4916469026 984.49054993586 87.903 2 -0.6944063143241879 0.20760750395906932 1.0 ['ENSG00000103522|ENST00000337929|IL21R'] 124536 8102 VLGARPHLQPD True H1975_Epitope_Rep3 1201.6567551650899 1201.65564993586 36.139 2 -0.6944094269258979 0.20760750395906932 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 3762 8286 AGTPPPRTPRP True NCI_RA007_Epitope_Rep1 1145.63054041725 1145.62944993586 36.231 2 -0.6944709921329951 0.2076342154145985 1.0 ['ENST00000587257.1_1_19:36426667-36427862:+|nuORF'] 75832 6262 NRDLATPVM-[Oxidation] True PC9_epitope_Rep2 1031.50698007735 1031.50588993586 29.485 2 -0.6944758587001039 0.2076342154145985 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 6412 16956 APSFAPSSSV True PC9_epitope_Rep3 948.45526139388 948.45416993586 70.382 2 -0.6945008526226296 0.2076342154145985 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 125007 11805 VLNVCETL True NCI_RA007_Epitope_Rep3 889.45790424617 889.45680993586 53.552 2 -0.6945585309856211 0.2076342154145985 1.0 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188', 'ENST00000477069.5_1_9:131747266-131765892:+|nuORF', 'ENST00000487952.1_1_9:131761928-131764086:+|nuORF'] 16258 12254 EEHRPLLL True PC9_epitope_Rep5 1005.5607295219298 1005.55962993586 52.122 2 -0.6945761730022694 0.2076342154145985 1.0 ['ENST00000497660.5_1_1:8390216-8404070:+|nuORF', 'ENSG00000162426|ENST00000471889|SLC45A1'] 116151 11888 TVTEITLI True NCI_RA007_Epitope_Rep3 888.5167990212799 888.51570993586 53.893 2 -0.6946173196845029 0.2076342154145985 1.0 ['OR6M1|p.D119*|1|0.27|ENSG00000196099|chr11:123805995-123805996|-/A|frameshift_variant', 'OR6M1|p.C238Lfs*31|1|0.17|ENSG00000196099|chr11:123805637-123805638|-/A|frameshift_variant', 'ENSG00000196099|ENST00000309154|OR6M1'] 80484 13046 PLLFDKLYL True PC9_epitope_Rep2 1120.6532329244399 1120.65212993586 55.461 2 -0.6946311031959308 0.20764569758236404 1.0 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF'] 20138 5666 ENLRPSEPAP True H1975_Epitope_Rep2 1108.5512870370399 1108.55018993586 26.791 2 -0.6946665944765751 0.20764569758236404 1.0 ['nc|ENSG00000148384|Q9NRR6-2|INPP5E', 'ENSG00000148384|ENST00000371712|INPP5E'] 31400 13277 GEDCREAV True NCI_RA007_Epitope_Rep4 877.35998111005 877.35888993586 58.205 2 -0.6946729565844144 0.20764569758236404 1.0 ['ENST00000513286.1_1_4:54441909-54442551:+|nuORF', 'ENSG00000170619|ENST00000305103|COMMD5'] 10177 23533 CCESSCCC True NCI_RA007_Epitope_Rep3 836.16313850376 836.16202993586 102.1 2 -0.6946781513536108 0.20764569758236404 1.0 ['ENSG00000241241|ENST00000440582|KRTAP4-16'] 134607 20042 WWDIYYTLFEK True PC9_epitope_Rep4 1562.7445671099797 1562.74346993586 85.228 2 -0.6946902677769105 0.20764569758236404 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 78542 10887 PDLVNVIK True H1975_Epitope_Rep1 896.53311779176 896.53202993586 46.837 2 -0.6947045158082545 0.20764569758236404 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000493342.1_1_X:24745055-24752029:+|nuORF'] 78831 17349 PEQKIEREKER True NCI_RA007_Epitope_Rep3 1440.76849044204 1440.7673899358601 76.135 2 -0.694732239193688 0.2076545991535487 1.0 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 118147 9036 VAVGLGGLGEP True PC9_epitope_Rep1 967.5338460677499 967.53274993586 39.607 2 -0.694773866512291 0.2076545991535487 1.0 ['ENST00000263269.3_1_19:48946008-48947172:+|nuORF'] 121194 20651 VGGLSPLSSP True PC9_epitope_Rep2 912.4916469026001 912.49054993586 84.87 2 -0.6948215747774464 0.20766666159209585 1.0 ['ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1'] 48329 9669 KDSIQLSL True PC9_epitope_Rep3 902.50729696674 902.50618993586 42.142 2 -0.6948410767577617 0.2076787236633784 1.0 ['DOP1A|p.S1083Vfs*21|1|0.18|ENSG00000083097|chr6:83137286-83137288|CTA/TT|frameshift_variant', 'ENSG00000083097|ENST00000349129|DOP1A'] 127386 7954 VQQILDSHQTK True H1975_Epitope_Rep1 1295.68336383575 1295.6822699358602 35.542 2 -0.694860914210507 0.20768130061499118 1.0 ['nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1', 'CAMTA1|p.F1590Ifs*19|1|0.24|ENSG00000171735|chr1:7751268-7751269|-/A|frameshift_variant', 'ENSG00000171735|ENST00000303635|CAMTA1'] 1747 10665 AEGVLHHLHR True H1975_Epitope_Rep3 1167.6261237431502 1167.62502993586 46.097 2 -0.69486741125492 0.20768130061499118 1.0 ['nc|ENSG00000196715|Q8N0U8-2|VKORC1L1'] 125881 5135 VNSKAGTP True NCI_RA007_Epitope_Rep1 772.40791727864 772.40682993586 24.057 2 -0.6948778298123356 0.20768130061499118 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'ENST00000496360.5_1_1:39934274-39950491:+|nuORF'] 70461 22591 LYSCFIVFVTI True PC9_epitope_Rep1 1303.6886324569898 1303.68752993586 91.703 2 -0.6948792156530655 0.20768130061499118 1.0 ['nc|ENSG00000280055|Q8N9X5|LINC02912'] 75951 17215 NRFPYYRRKFP True PC9_epitope_Rep2 1542.82080079842 1542.8197099358601 71.475 2 -0.6948892650038817 0.20770226044600046 1.0 ['FOXD4|p.D136N|1|0.34|ENSG00000170122|chr9:117714-117714|C/T|missense_variant'] 30806 5509 GAPPQNSLDAP True NCI_RA007_Epitope_Rep4 1065.50908787189 1065.50798993586 27.782 2 -0.6948933385073457 0.20770226044600046 1.0 ['ENST00000465160.2_1_9:140286885-140287641:-|nuORF'] 114708 11384 TSSVSSLMSSP True PC9_epitope_Rep2 1081.4961402296901 1081.4950499358602 49.11 2 -0.6949314882224016 0.20770226044600046 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant'] 32908 6011 GINYREWYK True NCI_RA007_Epitope_Rep1 1227.6036569630699 1227.60254993586 27.426 2 -0.6949454548738531 0.2077079971993059 1.0 ['nc|ENSG00000100433|P57789|KCNK10', 'nc|ENSG00000100433|P57789-4|KCNK10', 'ENSG00000100433|ENST00000319231|KCNK10'] 59414 9127 LGLSMQRNLNS True PC9_epitope_Rep4 1231.63430546835 1231.63264490379 42.693 3 -0.6949667547808488 0.2077079971993059 1.0 ['ENST00000296487.8_2_3:52280242-52280808:+|nuORF'] 111330 8675 TLIDSSSHDEW True H1975_Epitope_Rep2 1288.5571602631198 1288.55606993586 38.329 2 -0.6949670901266952 0.2077079971993059 1.0 ['nc|ENSG00000142794|Q9H094-3|NBPF3', 'ENSG00000142794|ENST00000318249|NBPF3', 'nc|ENSG00000142794|Q9H094-5|NBPF3', 'ENST00000477050.1_1_1:21799915-21805851:+|nuORF', 'nc|ENSG00000142794|Q9H094-2|NBPF3'] 77065 7652 NWEYKTDTDLY True H1975_Epitope_Rep1 1446.63032520338 1446.6292299358602 34.411 2 -0.695050290637467 0.20774733637747336 1.0 ['PPWD1|p.V596*|1|0.26|ENSG00000113593|chr5:65586169-65586169|G/-|frameshift_variant', 'ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 116236 2628 TVTWHHWGT True NCI_RA007_Epitope_Rep5 1123.51992733911 1123.5188299358601 14.795 2 -0.6950549962859772 0.20774733637747336 1.0 ['ENST00000298295.3_1_10:45472209-45472434:-|nuORF'] 61015 9654 LLAPAPNK True PC9_epitope_Rep2 822.4963383602201 822.49524993586 42.473 2 -0.6951427898652681 0.207774615302659 1.0 ['ENST00000506459.1_1_4:33012907-33013108:-|nuORF'] 89826 16777 RFKKHKLIPC True NCI_RA007_Epitope_Rep4 1268.75396710856 1268.7528699358602 72.718 2 -0.6951696119984041 0.20780189339746127 1.0 ['ZNF804B|p.G876Afs*14|1|0.17|ENSG00000182348|chr7:89335607-89335607|G/-|frameshift_variant', 'ZNF804B|p.P1078Rfs*8|1|0.11|ENSG00000182348|chr7:89336214-89336214|C/-|frameshift_variant', 'ZNF804B|p.I1255Nfs*76|1|0.46|ENSG00000182348|chr7:89336744-89336745|-/A|frameshift_variant', 'ENSG00000182348|ENST00000333190|ZNF804B', 'ZNF804B|p.S632Y|1|0.37|ENSG00000182348|chr7:89334877-89334877|C/A|missense_variant'] 10413 20941 CLNLGKLVQV True PC9_epitope_Rep5 1085.62670090677 1085.6256099358602 85.607 2 -0.6952404013302189 0.2078139506567432 1.0 ['ENST00000502773.5_1_4:157892267-157892438:-|nuORF'] 80401 11000 PLIGHVTG True PC9_epitope_Rep1 792.4493881678 792.44828993586 47.199 2 -0.6952780445853064 0.2078431969321139 1.0 ['ENSG00000145283|ENST00000273905|SLC10A6'] 59936 10036 LHLDSLISKNI True PC9_epitope_Rep6 1251.71868671531 1251.71704490379 49.179 3 -0.6952911037957019 0.2078431969321139 1.0 ['ENST00000505330.5_1_3:130569614-130569746:+|nuORF'] 63529 17824 LPKNFSIKEIF True PC9_epitope_Rep6 1334.7598232512998 1334.75818490379 81.191 3 -0.6952923211626201 0.2078431969321139 1.0 ['ENSG00000120915|ENST00000521400|EPHX2', 'ENST00000520623.5_1_8:27348689-27396319:+|nuORF', 'nc|ENSG00000120915|P34913-3|EPHX2', 'nc|ENSG00000120915|P34913-2|EPHX2'] 16754 7385 EEYQHERLK True NCI_RA007_Epitope_Rep2 1230.59929985862 1230.59820993586 33.35 2 -0.6953035742691488 0.2078431969321139 1.0 ['ENST00000509702.5_1_4:23766811-23826805:-|nuORF', 'nc|ENSG00000109819|Q9UBK2-9|PPARGC1A', 'nc|ENSG00000109819|Q9UBK2-4|PPARGC1A', 'ENSG00000109819|ENST00000264867|PPARGC1A', 'nc|ENSG00000109819|Q9UBK2-3|PPARGC1A'] 110433 15373 TINLRNPVL True PC9_epitope_Rep5 1038.61857875122 1038.61748993586 64.142 2 -0.695326132651954 0.2078431969321139 1.0 ['ENST00000493723.5_1_7:24756537-24789393:-|nuORF', 'ENSG00000105928|ENST00000645220|GSDME'] 27387 15187 FNAVEYINTL True PC9_epitope_Rep6 1182.5920892198599 1182.59098993586 70.497 2 -0.6953494897739069 0.2078431969321139 1.0 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-3|VPS53', 'ENST00000571456.1_1_17:609254-617949:-|nuORF', 'ENST00000575207.5_1_17:560762-617949:-|nuORF', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 101060 12812 SLTPTEVPL True H1975_Epitope_Rep2 955.52261267771 955.52150993586 54.389 2 -0.6953803790620731 0.2078431969321139 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549', 'KIAA1549|p.A1010Gfs*12|1|0.57|ENSG00000122778|chr7:138911264-138911265|-/T|frameshift_variant', 'KIAA1549|p.P868L|1|0.21|ENSG00000122778|chr7:138917023-138917023|G/A|missense_variant'] 46040 7716 ISVRRFWFLMY True NCI_RA007_Epitope_Rep5 1516.8013112238 1516.79965490379 36.38 3 -0.6954456361075465 0.2078431969321139 1.0 ['GPR174|p.R300Efs*21|1|0.36|ENSG00000147138|chrX:79171904-79171904|C/-|frameshift_variant', 'ENSG00000147138|ENST00000645147|GPR174'] 45841 16469 ISQEPDPVQRL True PC9_epitope_Rep5 1280.6724647988797 1280.6713699358602 68.347 2 -0.6954551200835469 0.2078431969321139 1.0 ['nc|ENSG00000106785|Q14142-4|TRIM14', 'nc|ENSG00000106785|Q14142-2|TRIM14', 'nc|ENSG00000106785|Q14142-3|TRIM14', 'ENSG00000106785|ENST00000341469|TRIM14'] 131247 14485 VVQASTPAI True PC9_epitope_Rep6 884.4967322830399 884.49562993586 67.6 2 -0.6954734979938112 0.2078431969321139 1.0 ['nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'nc|ENSG00000140464|P29590-13|PML'] 72794 8660 NAGKGWGLERK True NCI_RA007_Epitope_Rep1 1214.6520041378196 1214.65090993586 37.688 2 -0.6954930596372502 0.20784892568019964 1.0 ['ENST00000446880.5_1_1:155288166-155291089:-|nuORF'] 23037 11692 EVKLWRSQN True H1975_Epitope_Rep1 1158.61455599994 1158.6134499358602 49.964 2 -0.6954994103873462 0.20784892568019964 1.0 ['ENST00000380554.4_2_10:5136697-5138638:+|nuORF'] 30960 11861 GASSGPVAWGP True H1975_Epitope_Rep1 984.4664947839199 984.46594496793 50.621 1 -0.6955041029158301 0.20784892568019964 1.0 ['KLF15|p.P177Hfs*52|1|0.13|ENSG00000163884|chr3:126352395-126352395|C/-|frameshift_variant', 'ENSG00000163884|ENST00000296233|KLF15'] 32886 18116 GILSVDLL True PC9_epitope_Rep2 828.49566965388 828.49456993586 74.985 2 -0.6956172212872428 0.20787303326333728 1.0 ['ENSG00000211448|ENST00000438257|DIO2', 'nc|ENSG00000211448|Q92813-2|DIO2', 'ENST00000438257.8_2_14:80669457-80677836:-|nuORF'] 112315 8562 TMETEAGFPRP True NCI_RA007_Epitope_Rep1 1234.5652228490198 1234.5635849037901 37.306 3 -0.6956234370753754 0.20787303326333728 1.0 ['ENST00000518450.5_3_19:48707158-48707464:-|nuORF'] 107553 4843 TADTTTHVTP True H1975_Epitope_Rep2 1042.49310345458 1042.49200993586 23.717 2 -0.6956552380539949 0.20788192331101643 1.0 ['nc|ENSG00000182871|P39060-1|COL18A1', 'nc|ENSG00000182871|P39060|COL18A1'] 43983 17742 ILGPTALIGI True PC9_epitope_Rep2 966.6113681124599 966.61026993586 73.527 2 -0.6956848331240914 0.20788192331101643 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 74498 23339 NKNRRKLF True PC9_epitope_Rep3 1074.6410455312998 1074.6399499358602 95.052 2 -0.6957119774182674 0.20789397605027313 1.0 ['ENSG00000122870|ENST00000373886|BICC1'] 134590 7895 WWAGRRRRKTR True NCI_RA007_Epitope_Rep1 1527.8759646891099 1527.87430490379 34.702 3 -0.6958080907360367 0.20790602842275038 1.0 ['ENST00000371417.3_1_9:140513107-140513176:-|nuORF'] 109294 9400 TGELDNTYIVY True H1975_Epitope_Rep1 1286.6030478263801 1286.6019499358601 41.07 2 -0.6958580531590769 0.2079180804284649 1.0 ['ENSG00000196562|ENST00000688720|SULF2', 'nc|ENSG00000196562|Q8IWU5-2|SULF2'] 122176 4580 VGRKPVDGT True PC9_epitope_Rep6 927.5137793295098 927.51268993586 24.886 2 -0.6959352827160976 0.20794474280758873 1.0 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 128007 3535 VRQPRAQLRR True PC9_epitope_Rep3 1278.7745193123399 1278.7734299358601 18.72 2 -0.6959525778371943 0.20794474280758873 1.0 ['ENSG00000147119|ENST00000276055|CHST7'] 12180 13458 DILEMFTI True PC9_epitope_Rep5 980.48887002128 980.48776993586 56.783 2 -0.6959732693414595 0.20794474280758873 1.0 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ENST00000513636.1_1_3:130672694-130678186:+|nuORF'] 48571 14384 KEIAKLDDF True PC9_epitope_Rep5 1077.57062549929 1077.5695299358601 60.328 2 -0.6959795972704333 0.20794474280758873 1.0 ['ENSG00000164332|ENST00000296786|UBLCP1', 'ENST00000519276.1_1_5:158701561-158711936:+|nuORF'] 65405 5318 LSESQEENK True NCI_RA007_Epitope_Rep4 1062.4829326937 1062.48182993586 27.017 2 -0.6960053260736537 0.20794474280758873 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 65980 7249 LSLSERGVAAP True H1975_Epitope_Rep1 1098.6033226098998 1098.6022299358601 32.893 2 -0.6960126850823691 0.20794474280758873 1.0 ['ENST00000268482.7_1_16:72127868-72127946:+|nuORF'] 120936 3747 VGEIVRRFERK True NCI_RA007_Epitope_Rep1 1387.8048163811097 1387.80316490379 18.55 3 -0.6960415005488775 0.2079473019640059 1.0 ['ENST00000566600.1_1_16:1821268-1821535:-|nuORF', 'ENSG00000103024|ENST00000219302|NME3'] 47240 13594 IYDYAIVLFK True NCI_RA007_Epitope_Rep2 1243.6852613287099 1243.6841699358602 57.518 2 -0.6960453834963849 0.2079473019640059 1.0 ['nc|ENSG00000091490|Q68CR1-3|SEL1L3', 'nc|ENSG00000091490|Q68CR1-2|SEL1L3', 'ENSG00000091490|ENST00000399878|SEL1L3', 'chr4:25782418-25788224|110|20.14|0.74|4.77|-|0|SEL1L3,SEL1L3|1'] 12701 13775 DLFHTIETL True PC9_epitope_Rep3 1087.55497543515 1087.5538699358601 58.066 2 -0.696062926084933 0.2079473019640059 1.0 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 69507 6865 LVSMLGCLP True NCI_RA007_Epitope_Rep1 931.4870961994699 931.48598993586 30.707 2 -0.6960747032146936 0.2079473019640059 1.0 ['ENST00000374512.7_2_6:33381598-33383628:+|nuORF'] 44955 8684 IQGGFRCLAF True PC9_epitope_Rep5 1110.56443500338 1110.56332993586 38.345 2 -0.6961076617299806 0.20795935132503726 1.0 ['nc|ENSG00000077942|P23142-2|FBLN1', 'nc|ENSG00000077942|P23142-3|FBLN1', 'nc|ENSG00000077942|P23142-4|FBLN1', 'ENSG00000077942|ENST00000327858|FBLN1'] 17320 18127 EHDPQYAVIL True PC9_epitope_Rep3 1183.5873381925899 1183.58624993586 74.926 2 -0.6961785431595701 0.20800182551152355 1.0 ['ENSG00000158417|ENST00000289371|EIF5B'] 121201 5761 VGGNEGIVIT True NCI_RA007_Epitope_Rep5 957.51311062317 957.51200993586 28.846 2 -0.69620515291475 0.20801387367652427 1.0 ['nc|ENSG00000120519|Q0GE19-3|SLC10A7'] 20366 8214 EPILNYLHR True PC9_epitope_Rep2 1153.62439240765 1153.6227449037901 36.952 3 -0.6963023590225698 0.20802592147496843 1.0 ['ENST00000526766.1_1_11:112051504-112052349:+|nuORF'] 19468 16391 ELQDTLEIA True PC9_epitope_Rep5 1030.51825557326 1030.51714993586 68.046 2 -0.6963155587152303 0.20803796890687273 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant'] 35178 7371 GSDFDC[Carbamidomethyl]ELR True H1975_Epitope_Rep3 1097.4447736425998 1097.44366993586 33.33 2 -0.6964007383003886 0.20814128599461507 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK', 'ENST00000485383.1_1_3:96068520-96068997:+|nuORF'] 13982 11062 DRRFWRKYLHL True PC9_epitope_Rep4 1588.87389900044 1588.8722549037898 50.326 3 -0.6964236876530574 0.20815016504160266 1.0 ['ENSG00000160957|ENST00000617875|RECQL4'] 134601 15017 WWDIYYTLFEK True H1975_Epitope_Rep3 1562.7445671099797 1562.74346993586 63.154 2 -0.6964277991299924 0.20815016504160266 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 134737 20657 WWWKLHFVWER True PC9_epitope_Rep3 1671.84628727027 1671.8451899358602 84.729 2 -0.6964447025550062 0.20816220985062822 1.0 ['MGAT2|p.T412Sfs*8|1|0.53|ENSG00000168282|chr14:49622499-49622502|CTAA/-|frameshift_variant', 'ENSG00000168282|ENST00000305386|MGAT2'] 98945 10116 SIYTRSVIDP True PC9_epitope_Rep1 1149.60298825673 1149.60188993586 43.783 2 -0.6965451541244646 0.20818313179709483 1.0 ['ENSG00000180370|ENST00000327134|PAK2', 'ENST00000556425.2_1_15:21937379-21938108:-|nuORF'] 16529 7608 EEPVFYISI True NCI_RA007_Epitope_Rep5 1095.54882742555 1095.5477299358602 35.961 2 -0.6965712441374968 0.20818313179709483 1.0 ['ENSG00000071991|ENST00000262150|CDH19'] 125305 11651 VLRSWWPRWWW True NCI_RA007_Epitope_Rep2 1656.8466216234397 1656.8455299358602 49.912 2 -0.6966233394683747 0.20818313179709483 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 38092 4380 HENNNGQAAF True NCI_RA007_Epitope_Rep3 1100.4635346618 1100.4624299358602 24.002 2 -0.6967323388780383 0.20828643567669516 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 58354 16473 LEVEECRCPP True PC9_epitope_Rep2 1173.5158301284498 1173.51472993586 68.605 2 -0.6967580574900594 0.20829847749707212 1.0 ['ENSG00000142798|ENST00000374695|HSPG2'] 12978 8765 DLPQLLQVK True NCI_RA007_Epitope_Rep3 1052.62299542532 1052.62188993586 41.565 2 -0.6967991677166401 0.20830101443324056 1.0 ['ENSG00000188501|ENST00000695545|LCTL'] 20771 6324 EQLQIEYSFP True NCI_RA007_Epitope_Rep1 1252.5975685231197 1252.5964699358601 28.623 2 -0.6968144547063286 0.20830101443324056 1.0 ['ENSG00000147324|ENST00000276282|MFHAS1'] 5645 7857 APAGPALAQ True PC9_epitope_Rep6 794.42865272322 794.42754993586 39.624 2 -0.6968153824067381 0.20830101443324056 1.0 ['nc|ENSG00000197119|Q8N8R3-3|SLC25A29', 'ENSG00000197119|ENST00000359232|SLC25A29'] 64329 10395 LQNIQETVV True PC9_epitope_Rep5 1042.56587447202 1042.56476993586 44.969 2 -0.6968174759443398 0.20830101443324056 1.0 ['ENST00000282096.8_1_11:14665308-14793517:+|nuORF'] 107885 11037 TATFPYLMLVV True H1975_Epitope_Rep3 1253.67298239285 1253.67188993586 47.543 2 -0.6968529447905097 0.208325095432908 1.0 ['nc|ENSG00000010379|Q9NSD5-2|SLC6A13', 'ENSG00000010379|ENST00000343164|SLC6A13'] 103934 9714 SRPGYPSP True H1975_Epitope_Rep3 859.41881631551 859.41770993586 42.384 2 -0.6968545893010808 0.208325095432908 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2', 'nc|ENSG00000169398|Q05397-2|PTK2'] 128121 23433 VRRRRRGELA True PC9_epitope_Rep4 1267.7697682850699 1267.76812490379 98.423 3 -0.6968618482374883 0.20833396699870732 1.0 ['ENST00000400198.7_2_13:107220308-107220443:-|nuORF'] 96968 14352 SEVFHVNISL True PC9_epitope_Rep4 1143.59242357303 1143.5913299358601 63.111 2 -0.6968642281823497 0.20833396699870732 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 45790 11315 ISNQTQELA True PC9_epitope_Rep3 1002.4981888350198 1002.49708993586 48.529 2 -0.6968909411748732 0.20836121418577772 1.0 ['ENST00000295951.7_1_3:57742468-57743248:+|nuORF'] 70573 6278 LYWTDWNRDNP True NCI_RA007_Epitope_Rep2 1478.6578773638998 1478.6562449037901 29.026 3 -0.6969338783786359 0.2083732530376994 1.0 ['nc|ENSG00000116962|P14543-2|NID1', 'ENSG00000116962|ENST00000264187|NID1'] 18837 11867 ELEELELVESP True H1975_Epitope_Rep1 1285.6289282210498 1285.62782993586 50.645 2 -0.6969737527651895 0.20840049879862527 1.0 ['ENSG00000188037|ENST00000343257|CLCN1'] 138504 19916 YRIREFRQTFR True PC9_epitope_Rep3 1570.84807817542 1570.84642490379 81.848 3 -0.6969926682517037 0.20841253668699342 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 12923 9070 DLNEMENWTMG True H1975_Epitope_Rep3 1338.5220377076998 1338.52094993586 39.873 2 -0.6971186974316584 0.20845181794680737 1.0 ['nc|ENSG00000177300|Q8N7P3|CLDN22', 'ENSG00000185758|ENST00000541814|CLDN24'] 3111 7770 AGASQAKAYK True NCI_RA007_Epitope_Rep4 993.5243440132098 993.52324993586 36.569 2 -0.697146055785177 0.20845181794680737 1.0 ['ENSG00000109686|ENST00000604030|SH3D19', 'nc|ENSG00000109686|Q5HYK7-3|SH3D19', 'nc|ENSG00000109686|Q5HYK7-2|SH3D19', 'nc|ENSG00000109686|Q5HYK7|SH3D19'] 73074 5404 NDLSLREAK True H1975_Epitope_Rep3 1044.55637241748 1044.55526993586 25.848 2 -0.6972481607362422 0.20852150905524383 1.0 ['CON__REFSEQ:XP_585019'] 124037 22808 VKNYFYYYLFQ True H1975_Epitope_Rep1 1546.7496524904197 1546.7485499358602 94.862 2 -0.697273193169365 0.20852150905524383 1.0 ['ENSG00000163082|ENST00000321276|SGPP2'] 4236 18591 AIGAVIHYL True PC9_epitope_Rep2 955.54910220907 955.54800993586 76.862 2 -0.6973128749176265 0.20854875007602944 1.0 ['ENSG00000020129|ENST00000373243|NCDN', 'nc|ENSG00000020129|Q9UBB6-2|NCDN'] 23138 4690 EVNAVQFSP True NCI_RA007_Epitope_Rep3 989.4818104948898 989.48070993586 25.393 2 -0.6973250573535421 0.20857599026837984 1.0 ['DGKD-ATG16L1|2|fusion', 'nc|ENSG00000085978|Q676U5-4|ATG16L1', 'nc|ENSG00000085978|Q676U5-5|ATG16L1', 'nc|ENSG00000085978|Q676U5-2|ATG16L1', 'ENSG00000085978|ENST00000392017|ATG16L1', 'nc|ENSG00000085978|Q676U5-3|ATG16L1', 'ENST00000479942.5_1_2:234160473-234198706:+|nuORF'] 79690 6841 PHLLLYWNRFV True PC9_epitope_Rep4 1456.79794009552 1456.79629490379 33.535 3 -0.6973541114649849 0.20858802420703706 1.0 ['ENST00000314393.5_1_8:123985618-123985864:+|nuORF'] 60900 23297 LKRRIWRMPLF True PC9_epitope_Rep4 1514.9020283245798 1514.9003849037902 97.867 3 -0.6973624844956368 0.2085968860235981 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 18015 9972 EIIDFYNFMSP True H1975_Epitope_Rep2 1374.61658971554 1374.61495490379 43.346 3 -0.6973656860543073 0.2085968860235981 1.0 ['ENSG00000112941|ENST00000230859|TENT4A'] 60748 6831 LKDQVGRDQF True H1975_Epitope_Rep3 1204.6200353031998 1204.61892993586 31.231 2 -0.697396867116852 0.20863932855904757 1.0 ['TTLL5-RGS6|2|fusion', 'TTLL5-RGS6|5|fusion', 'TTLL5-RGS6|1|fusion', 'TTLL5-RGS6|8|fusion', 'TTLL5-RGS6|4|fusion', 'TTLL5-RGS6|6|fusion', 'TTLL5-RGS6|7|fusion', 'TTLL5-RGS6|3|fusion', 'nc|ENSG00000182732|P49758-14|RGS6', 'ENSG00000182732|ENST00000553525|RGS6', 'nc|ENSG00000182732|P49758-2|RGS6', 'nc|ENSG00000182732|P49758-15|RGS6', 'nc|ENSG00000182732|P49758|RGS6', 'nc|ENSG00000182732|P49758-8|RGS6', 'nc|ENSG00000182732|P49758-5|RGS6', 'nc|ENSG00000182732|P49758-16|RGS6', 'nc|ENSG00000182732|P49758-9|RGS6', 'nc|ENSG00000182732|P49758-10|RGS6', 'nc|ENSG00000182732|P49758-7|RGS6', 'nc|ENSG00000182732|P49758-11|RGS6', 'nc|ENSG00000182732|P49758-6|RGS6', 'RGS6|p.D403Ifs*7|1|0.18|ENSG00000182732|chr14:72518465-72518465|G/-|frameshift_variant', 'nc|ENSG00000182732|P49758-12|RGS6', 'nc|ENSG00000182732|P49758-13|RGS6'] 62975 11402 LNEISEETTIQ True PC9_epitope_Rep5 1275.61942616651 1275.6183299358602 48.855 2 -0.697406528311284 0.2086481884113059 1.0 ['ENSG00000164118|ENST00000503780|CEP44'] 109391 6465 TGNVQFNEK True NCI_RA007_Epitope_Rep3 1035.49852318819 1035.49742993586 32.461 2 -0.6974089613585791 0.2086481884113059 1.0 ['ENST00000481559.6_1_5:152869375-153085697:+|nuORF', 'nc|ENSG00000155511|P42261-3|GRIA1', 'nc|ENSG00000155511|P42261-4|GRIA1', 'nc|ENSG00000155511|P42261-2|GRIA1', 'ENSG00000155511|ENST00000285900|GRIA1', 'nc|ENSG00000155511|P42261-6|GRIA1', 'nc|ENSG00000155511|P42261-5|GRIA1'] 58427 18601 LEVWWYLL True PC9_epitope_Rep5 1120.59571804832 1120.5946299358602 76.573 2 -0.6974728319321793 0.20869062823085813 1.0 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 110173 10829 TIDKYLKRYER True NCI_RA007_Epitope_Rep2 1483.8147123584697 1483.81360993586 46.726 2 -0.6975284558414534 0.20869948611913522 1.0 ['ELP1|p.K945R|1|0.4|ENSG00000070061|chr9:108893969-108893969|T/C|missense_variant'] 55648 22585 LDALNDALEKK True PC9_epitope_Rep1 1228.66631678928 1228.66520993586 91.68 2 -0.6975370580800533 0.20869948611913522 1.0 ['chr2:158807115-158862406|138|10.97|0.46|4.57|+|0|DAPL1,None|1'] 66659 4515 LSSSSHGVP True NCI_RA007_Epitope_Rep5 869.42429561877 869.42318993586 24.021 2 -0.6976022208728322 0.2087355762652599 1.0 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 33737 5655 GLRYWYRRLPG True PC9_epitope_Rep6 1435.7836870137098 1435.78204490379 29.855 3 -0.697652638395068 0.2087355762652599 1.0 ['ENST00000441576.6_2_3:49054739-49054894:-|nuORF', 'ENST00000498794.1_1_3:49054739-49054862:-|nuORF'] 137217 10258 YLENRVRPL True PC9_epitope_Rep5 1158.6509415086598 1158.6493049037902 44.444 3 -0.6976606775761236 0.2087355762652599 1.0 ['ENSG00000164329|ENST00000453514|TENT2', 'nc|ENSG00000164329|Q6PIY7-2|TENT2'] 42184 12052 IEGAFRQGL True PC9_epitope_Rep6 989.5294293936499 989.52832993586 57.668 2 -0.6977638262541915 0.20879003937426838 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'POLQ|p.S1786Ifs*30|1|0.19|ENSG00000051341|chr3:121487574-121487574|C/-|frameshift_variant', 'POLQ|p.L1430Ffs*5|1|0.16|ENSG00000051341|chr3:121488641-121488642|-/A|frameshift_variant', 'POLQ|p.M713Rfs*14|2|0.15|ENSG00000051341|chr3:121498492-121498492|A/-|frameshift_variant', 'POLQ|p.Y758Rfs*36|1|0.31|ENSG00000051341|chr3:121496811-121496815|CATAA/-|frameshift_variant'] 43828 15506 IKTRDAVL True PC9_epitope_Rep5 914.5549158654999 914.55436496793 64.653 1 -0.6978447505604646 0.20879003937426838 1.0 ['ENSG00000141437|ENST00000269205|SLC25A52'] 17939 6499 EIEPETEGI True H1975_Epitope_Rep2 1015.47097102767 1015.46986993586 29.915 2 -0.6979167178673625 0.20880206749771968 1.0 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000445090.5_1_2:233028172-233195406:+|nuORF', 'nc|ENSG00000144535|Q8IYB7-2|DIS3L2', 'DIS3L2|p.G327R|1|0.17|ENSG00000144535|chr2:232163487-232163487|G/C|missense_variant', 'nc|ENSG00000144535|Q8IYB7-3|DIS3L2'] 68185 11225 LTQESGPYK True H1975_Epitope_Rep3 1021.5080252427298 1021.50692993586 48.279 2 -0.6980408963378774 0.2088685526655823 1.0 ['ENSG00000283439|ENST00000636696|SPEM3'] 79723 7967 PHQPLLSQR True NCI_RA007_Epitope_Rep4 1074.59342663254 1074.59232993586 37.398 2 -0.6980412987105336 0.2088685526655823 1.0 ['ENST00000296666.12_1_5:126862366-126866010:+|nuORF'] 119999 16139 VFATDDGF True PC9_epitope_Rep3 870.3759484440199 870.37484993586 67.227 2 -0.6980758670161836 0.2088685526655823 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 103356 12796 SQVKPFVP True PC9_epitope_Rep3 900.5069030439198 900.50580993586 54.24 2 -0.6981273446297246 0.2088926046971194 1.0 ['ENST00000308982.11_1_3:128631530-128631665:+|nuORF'] 42745 11275 IFDYIQWKYR True NCI_RA007_Epitope_Rep1 1430.73467113262 1430.73356993586 47.838 2 -0.6981321844493665 0.2088926046971194 1.0 ['ENSG00000070501|ENST00000265421|POLB'] 57278 12187 LEGERNHII True PC9_epitope_Rep3 1079.5723568347898 1079.5712499358601 51.912 2 -0.6981827999497582 0.20891983096707506 1.0 ['nc|ENSG00000289604|P0CG41|CTAGE8', 'nc|ENSG00000288784|Q8IX94|CTAGE4', 'ENSG00000236761|ENST00000314099|CTAGE9', 'ENSG00000271321|ENST00000470691|CTAGE6', 'ENSG00000271079|ENST00000420911|CTAGE15'] 124982 10207 VLNFLKDHF True NCI_RA007_Epitope_Rep3 1131.6076797143498 1131.60604490379 47.232 3 -0.6982110182133615 0.20892868000243206 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'ENST00000561252.1_1_15:90768241-90768761:+|nuORF', 'ENST00000560993.1_1_15:90767112-90768514:+|nuORF'] 128939 11786 VSTWNLDT True H1975_Epitope_Rep3 934.4396113297399 934.43850993586 50.481 2 -0.6982489682413164 0.20892868000243206 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 42174 18752 IEFRPLSL True PC9_epitope_Rep3 973.5596668927699 973.55856993586 77.351 2 -0.6982643148178466 0.20895590448251228 1.0 ['ENST00000361368.6_1_7:98625224-98626022:-|nuORF'] 36047 7892 GVDVTELAK True NCI_RA007_Epitope_Rep1 930.5022115863 930.50110993586 34.691 2 -0.6984593777333813 0.20905277237354086 1.0 ['VCAN-CNTNAP3B|1|fusion', 'ENST00000377653.2_1_9:39174468-39266986:-|nuORF', 'nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3', 'ENSG00000283378|ENST00000636699|CNTNAP3C', 'nc|ENSG00000154529|Q96NU0-2|CNTNAP3B'] 129894 23745 VTLTNLISLN True NCI_RA007_Epitope_Rep4 1086.62847472858 1086.62736993586 102.95 2 -0.6985010275310926 0.20905277237354086 1.0 ['ENSG00000108556|ENST00000649488|CHRNE'] 18159 7103 EIPATEPPQLP True H1975_Epitope_Rep3 1190.6183039676998 1190.61720993586 32.291 2 -0.6985181715557727 0.20905277237354086 1.0 ['ENSG00000260314|ENST00000569591|MRC1'] 115255 16462 TVDGRTILV True PC9_epitope_Rep1 972.5603951687599 972.55928993586 68.146 2 -0.6985365359658245 0.2090647941270348 1.0 ['ENST00000464678.5_1_22:51208306-51220722:-|nuORF', 'nc|ENSG00000144134|Q9UNT1|RABL2B', 'ENSG00000079974|ENST00000691320|RABL2B', 'nc|ENSG00000144134|Q9UNT1-3|RABL2B'] 13477 9987 DPDLVSEGR True H1975_Epitope_Rep3 986.46688870674 986.46578993586 43.451 2 -0.6985738945829733 0.2090920144694045 1.0 ['ENSG00000203805|ENST00000398250|PLPP4'] 99277 13279 SLDERFDAHLA True PC9_epitope_Rep1 1272.6098645423199 1272.60820490379 55.942 3 -0.698631354787241 0.2091496314309598 1.0 ['ENSG00000198793|ENST00000361445|MTOR'] 63333 8087 LPEALLPF True NCI_RA007_Epitope_Rep5 898.5164050984599 898.51530993586 37.796 2 -0.6986543086933423 0.20916165116420452 1.0 ['ENST00000576846.1_1_17:7530278-7530680:-|nuORF'] 119481 11707 VEQFHKYLP True PC9_epitope_Rep1 1159.6025943339098 1159.60093490379 49.906 3 -0.6987603582070728 0.20917049150430103 1.0 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1'] 140156 13959 YVTALYITS True H1975_Epitope_Rep1 1029.5382627418498 1029.5371699358602 58.85 2 -0.6987861508945648 0.20917049150430103 1.0 ['nc|ENSG00000178904|Q6ZPD9-2|DPY19L3', 'DPY19L3|p.G669Efs*7|1|0.48|ENSG00000178904|chr19:32482094-32482094|G/-|frameshift_variant', 'ENSG00000178904|ENST00000392250|DPY19L3'] 58759 10086 LFLRNHNF True NCI_RA007_Epitope_Rep4 1059.56139822827 1059.56030993586 45.645 2 -0.6987893401179383 0.20917933130699087 1.0 ['nc|ENSG00000064886|Q15782-5|CHI3L2', 'nc|ENSG00000064886|Q15782-6|CHI3L2', 'ENSG00000064886|ENST00000369748|CHI3L2'] 81852 20677 PSIAAAFL True PC9_epitope_Rep5 788.4432401582001 788.44214993586 84.589 2 -0.6988055636733908 0.20917933130699087 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 24932 2995 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 16.213 2 -0.698817976094087 0.20920654701296332 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 11166 7582 DEHDNRTRLVE True H1975_Epitope_Rep1 1382.65385461262 1382.6527499358601 34.157 2 -0.6988390183503639 0.20921220594492737 1.0 ['ENSG00000092850|ENST00000207457|TEKT2'] 68298 9325 LTRNSFALV True PC9_epitope_Rep3 1019.5763795860698 1019.57528993586 40.81 2 -0.6988443205168577 0.20921220594492737 1.0 ['ENSG00000164342|ENST00000296795|TLR3', 'nc|ENSG00000164342|O15455-2|TLR3'] 119816 6053 VEVKIEEP True NCI_RA007_Epitope_Rep2 941.5069626135698 941.50586993586 28.149 2 -0.6988836937075612 0.20921220594492737 1.0 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 83544 6882 QDMKWKNKF True NCI_RA007_Epitope_Rep1 1223.6121134717898 1223.61100993586 30.773 2 -0.6989042275080978 0.20922422308335234 1.0 ['ENSG00000006025|ENST00000007414|OSBPL7', 'ENST00000579728.5_1_17:45885659-45892067:-|nuORF', 'ENST00000583167.5_1_17:45885659-45892067:-|nuORF'] 57775 10007 LEPAPPSLGDP True PC9_epitope_Rep2 1091.54989005471 1091.5487899358602 43.82 2 -0.698996955195158 0.2092330603127327 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1'] 122662 5415 VGTQDRRRRWK True PC9_epitope_Rep3 1456.8123613730397 1456.81072490379 25.901 3 -0.6990590092916068 0.2092330603127327 1.0 ['nc|ENSG00000130643|Q9NYX4-3|CALY'] 75836 6112 NRDLATPVM-[Oxidation] True PC9_epitope_Rep4 1031.50698007735 1031.50588993586 30.519 2 -0.6991578788733754 0.20926592818829678 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 60148 3763 LHYFQLKWHHR True NCI_RA007_Epitope_Rep2 1563.82113515159 1563.81893987172 19.277 4 -0.6991579361781234 0.20926592818829678 1.0 ['ENST00000423620.6_1_8:95718261-95718693:+|nuORF'] 57995 7122 LEQVNVIQSH True H1975_Epitope_Rep1 1165.60913626633 1165.60802993586 32.419 2 -0.6991614803940238 0.20926592818829678 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.G158Sfs*29|1|0.37|ENSG00000081248|chr1:201092040-201092042|CCG/AA|frameshift_variant', 'CACNA1S|p.G577Afs*35|2|0.19|ENSG00000081248|chr1:201077017-201077017|C/-|frameshift_variant'] 11515 6583 DGHRAPPP True H1975_Epitope_Rep2 845.4143996414099 845.41330993586 30.232 2 -0.6991638276684965 0.20926592818829678 1.0 ['PPIG-FAM117B|1|fusion'] 64278 8444 LQLLSSSDPPA True H1975_Epitope_Rep1 1126.58700383942 1126.5859099358602 37.408 2 -0.699263572668564 0.2093539172187443 1.0 ['ENST00000472616.1_1_7:139790896-139796717:-|nuORF', 'ENST00000417349.5_1_7:99716173-99716860:-|nuORF'] 118277 9832 VDAEDGHGP True H1975_Epitope_Rep2 895.36717466547 895.36606993586 42.804 2 -0.6992872024266392 0.2093811253095893 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 121306 5202 VGHLRVRRFWS True PC9_epitope_Rep4 1411.79492040375 1411.79326490379 26.711 3 -0.6994068245242037 0.20942599288948313 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 121005 10113 VGFAEAAR True PC9_epitope_Rep1 819.4239016959499 819.42280993586 43.771 2 -0.6994117140173803 0.20942599288948313 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 113068 11529 TPWERLWFLLL True NCI_RA007_Epitope_Rep3 1472.81800683376 1472.8163549037902 52.475 3 -0.6994197460621906 0.20942599288948313 1.0 ['ENSG00000158555|ENST00000336898|GDPD5', 'ENST00000528031.1_1_11:75167699-75188792:-|nuORF'] 83817 6272 QEETKTVL True PC9_epitope_Rep2 946.4971262058599 946.49602993586 29.522 2 -0.6994573088821525 0.20942599288948313 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 77689 6456 PAAARPLPAA True PC9_epitope_Rep2 933.5396001545298 933.53850993586 30.247 2 -0.6994646743727099 0.20942599288948313 1.0 ['ENST00000555638.5_1_14:67940311-67953837:-|nuORF'] 93309 23848 RRRYLRRKER True PC9_epitope_Rep2 1487.9021794369498 1487.90108993586 97.201 2 -0.6994738621261717 0.2094348222424795 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 79511 10625 PGQLKILTG True PC9_epitope_Rep6 925.55966689277 925.55856993586 51.687 2 -0.6994974929420277 0.2094348222424795 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF'] 104114 2562 SRWTRAARPCS True NCI_RA007_Epitope_Rep5 1289.6411221842898 1289.63947490379 14.525 3 -0.6995584555098724 0.20944046913692782 1.0 ['ENST00000480818.3_1_9:139838480-139838585:-|nuORF'] 83434 16621 QCSMNMNWLSL True PC9_epitope_Rep4 1325.55664939461 1325.55499490379 71.902 3 -0.6995906969631519 0.20944046913692782 1.0 ['ENSG00000113369|ENST00000265138|ARRDC3'] 107516 5394 TAAPVTSTG True PC9_epitope_Rep3 803.4024975450301 803.40140993586 25.821 2 -0.6996237740526602 0.20944046913692782 1.0 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-16|MUC4', 'nc|ENSG00000145113|Q99102-17|MUC4', 'nc|ENSG00000145113|Q99102-9|MUC4', 'nc|ENSG00000145113|Q99102-2|MUC4', 'nc|ENSG00000145113|Q99102-15|MUC4', 'nc|ENSG00000145113|Q99102-11|MUC4', 'nc|ENSG00000145113|Q99102-8|MUC4', 'nc|ENSG00000145113|Q99102-7|MUC4', 'nc|ENSG00000145113|Q99102-5|MUC4'] 20957 5034 EQYIRRIQQ True NCI_RA007_Epitope_Rep1 1232.66256882152 1232.66092490379 23.666 3 -0.6996787920499463 0.2094676713660671 1.0 ['ENST00000505362.1_1_5:98106807-98108727:-|nuORF', 'ENST00000501938.6_1_5:98106807-98108385:-|nuORF', 'ENST00000505677.1_1_5:98106807-98109161:-|nuORF', 'ENST00000515003.1_1_5:98106807-98108385:-|nuORF'] 115014 24107 TTLRKKKKG True NCI_RA007_Epitope_Rep2 1058.69241239782 1058.69130993586 101.27 2 -0.6997671332269213 0.20949096930017772 1.0 ['nc|ENSG00000157119|Q2TBA0-2|KLHL40', 'ENSG00000157119|ENST00000287777|KLHL40'] 64861 10755 LSAPQKPQL True PC9_epitope_Rep1 980.5654805492 980.56438993586 46.257 2 -0.6997790453196979 0.20949096930017772 1.0 ['ENST00000291294.6_1_19:47123946-47124471:-|nuORF'] 27158 7711 FLRYFFYKNF True NCI_RA007_Epitope_Rep2 1443.7339428566295 1443.73228490379 34.621 3 -0.6997936748291994 0.20949096930017772 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 13410 11374 DNLLEQNLIRV True PC9_epitope_Rep3 1325.7303140281701 1325.72866490379 48.753 3 -0.699818046501507 0.20949096930017772 1.0 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11', 'ENST00000493026.2_1_17:30804487-30806484:+|nuORF'] 44380 8085 INDRQYDSRGR True H1975_Epitope_Rep1 1378.6701733830998 1378.66852490379 36.042 3 -0.6998195881498919 0.20949096930017772 1.0 ['nc|ENSG00000101076|P41235-7|HNF4A', 'nc|ENSG00000164749|Q14541|HNF4G', 'nc|ENSG00000101076|P41235-3|HNF4A', 'nc|ENSG00000101076|P41235-6|HNF4A', 'nc|ENSG00000164749|Q14541-2|HNF4G', 'ENSG00000101076|ENST00000316673|HNF4A', 'ENSG00000164749|ENST00000396423|HNF4G', 'nc|ENSG00000101076|P41235-2|HNF4A', 'ENST00000372920.1_1_20:43030124-43058302:+|nuORF', 'nc|ENSG00000101076|P41235|HNF4A', 'nc|ENSG00000101076|P41235-4|HNF4A'] 111758 12112 TLQKKDFP True PC9_epitope_Rep1 975.5389314481898 975.53782993586 51.451 2 -0.6998272910867482 0.20949096930017772 1.0 ['nc|ENSG00000072858|Q9NXL6-2|SIDT1', 'ENSG00000072858|ENST00000264852|SIDT1'] 40162 6416 HRDYITEKFWR True H1975_Epitope_Rep1 1549.7789955560897 1549.77736490379 29.738 3 -0.6998437213525714 0.20949096930017772 1.0 ['ENSG00000180549|ENST00000314412|FUT7'] 18095 14296 EIKWRISNAK True H1975_Epitope_Rep1 1243.7037053575098 1243.7026099358602 60.176 2 -0.6998540773989842 0.2095029772754891 1.0 ['ENST00000361804.4_1_10:112342380-112343169:+|nuORF'] 45710 21374 ISLPDLLLP True PC9_epitope_Rep6 979.59538369515 979.59428993586 95.091 2 -0.7000215270330995 0.20958138404520324 1.0 ['ENST00000367204.5_1_1:204095788-204096322:+|nuORF'] 23367 12967 EVTRRALFP True PC9_epitope_Rep6 1087.6138277239497 1087.6127299358602 61.438 2 -0.7000216159166615 0.20958138404520324 1.0 ['nc|ENSG00000123374|P24941-2|CDK2'] 20773 8545 EQLRCHFTWE True NCI_RA007_Epitope_Rep1 1347.6030053400698 1347.60190993586 37.24 2 -0.7000282560506093 0.20958138404520324 1.0 ['ENSG00000185745|ENST00000371804|IFIT1'] 110605 6220 TITATGSTTNP True NCI_RA007_Epitope_Rep2 1062.51931820242 1062.51822993586 28.802 2 -0.7000405122265908 0.20958138404520324 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S3673Afs*24|1|0.28|ENSG00000117983|chr11:1247893-1247893|C/-|frameshift_variant'] 36003 7296 GVDAGDVR True H1975_Epitope_Rep3 787.38243080679 787.3818849679301 33.039 1 -0.7001204399099156 0.2096237677901484 1.0 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF', 'ENST00000320442.8_1_12:58014065-58016599:+|nuORF'] 83518 12792 QDKIFRAHKVV True NCI_RA007_Epitope_Rep1 1339.77245362367 1339.7713499358601 53.745 2 -0.7001810908258891 0.20966296571940643 1.0 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44', 'ENST00000529348.1_1_11:130109693-130131768:-|nuORF', 'nc|ENSG00000196323|Q8NCP5-3|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-4|ZBTB44', 'nc|ENSG00000196323|Q8NCP5-2|ZBTB44'] 19438 17913 ELPQEDDDF True PC9_epitope_Rep5 1106.44039917538 1106.4393099358601 73.92 2 -0.7002476126490093 0.20966296571940643 1.0 ['AAGAB|p.E148Q|1|0.21|ENSG00000103591|chr15:67235988-67235988|C/G|missense_variant'] 18239 5888 EISEPRLQNYD True H1975_Epitope_Rep3 1362.6415585934199 1362.6404699358602 27.657 2 -0.7002868603743484 0.20968378846329092 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 119352 15702 VENHSYPIL True PC9_epitope_Rep6 1070.53965972418 1070.53856993586 72.61 2 -0.7002875188120432 0.20968378846329092 1.0 ['ENST00000370872.7_1_1:75188836-75188938:-|nuORF'] 119353 15702 VENHSYPIL True PC9_epitope_Rep6 1070.53965972418 1070.53856993586 72.61 2 -0.7002875188120432 0.20968378846329092 1.0 ['ENST00000370872.7_1_1:75188836-75188938:-|nuORF'] 84169 6895 QERSLVTVP True H1975_Epitope_Rep3 1027.5662088251897 1027.5651099358602 31.481 2 -0.7003153584224908 0.20969260676751109 1.0 ['ENST00000470294.5_1_1:155058014-155058898:+|nuORF'] 88820 25059 RDTKKTKRKKR True PC9_epitope_Rep5 1443.9110127851498 1443.90937490379 101.53 3 -0.7003273938114876 0.20969260676751109 1.0 ['nc|ENSG00000150776|Q6ZUT1-3|NKAPD1', 'nc|ENSG00000150776|Q6ZUT1|NKAPD1', 'ENSG00000150776|ENST00000393047|NKAPD1'] 129513 14752 VTFHLYLI True PC9_epitope_Rep6 1004.5695033004799 1004.56840993586 68.693 2 -0.7003815994535929 0.20970460930974258 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'nc|ENSG00000091592|Q9C000-3|NLRP1', 'nc|ENSG00000091592|Q9C000-4|NLRP1'] 121762 22532 VGLWRKRKF True PC9_epitope_Rep3 1188.7243812324398 1188.72328993586 91.944 2 -0.7003881082597193 0.20971342657979863 1.0 ['ENST00000455089.5_1_7:55087016-55210125:+|nuORF'] 125544 10756 VLWLPHWGLY True H1975_Epitope_Rep1 1282.6862643882198 1282.6851699358601 46.334 2 -0.700400622482293 0.20971342657979863 1.0 ['ENSG00000163933|ENST00000296292|RFT1'] 137119 7607 YLDEGRLRY True H1975_Epitope_Rep1 1183.5985715826298 1183.59691490379 34.252 3 -0.7004610988314128 0.20975580123921758 1.0 ['ENSG00000087095|ENST00000407008|NLK'] 116350 13178 TVYDRTTVL True PC9_epitope_Rep6 1066.5658744720201 1066.56476993586 62.334 2 -0.7005211445020691 0.209782988352139 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 60324 14674 LIFTHWTMSRK True H1975_Epitope_Rep1 1418.7492756509398 1418.74816993586 61.659 2 -0.7005959750829299 0.20980698850435073 1.0 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16'] 100262 9694 SLLRELHCP True NCI_RA007_Epitope_Rep1 1066.5593496229399 1066.5582499358602 41.709 2 -0.7005990522638268 0.20980698850435073 1.0 ['FAM98C-BLVRB|1|fusion', 'nc|ENSG00000130244|Q17RN3-2|FAM98C', 'ENSG00000130244|ENST00000252530|FAM98C'] 100666 12569 SLQVEHTWP True PC9_epitope_Rep3 1095.53490869691 1095.53380993586 53.368 2 -0.7006150907638343 0.20984617253579943 1.0 ['nc|ENSG00000150510|Q86V42-2|FAM124A'] 139646 6112 YTSETYLMKHM True H1975_Epitope_Rep1 1402.6261088534202 1402.6250099358601 28.578 2 -0.7006330893656824 0.20984617253579943 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 124817 15316 VLLIYTFIFW True NCI_RA007_Epitope_Rep2 1313.74238228201 1313.74128993586 64.271 2 -0.7006909527780228 0.20986698250728864 1.0 ['ENST00000496771.5_1_X:99891559-99891670:-|nuORF', 'ENSG00000000003|ENST00000373020|TSPAN6'] 122136 16674 VGRHQRGR True NCI_RA007_Epitope_Rep3 964.5427284723598 964.54217496793 73.396 1 -0.700705165078126 0.20986698250728864 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 45702 7742 ISLKPYHISK True NCI_RA007_Epitope_Rep5 1184.6917436914798 1184.69008490379 36.477 3 -0.7007077182709286 0.20986698250728864 1.0 ['ENSG00000128908|ENST00000648947|INO80'] 28855 11665 FTDPRAYLKY True H1975_Epitope_Rep3 1272.6502728023197 1272.64861490379 50.004 3 -0.7007282848834042 0.2099093490441411 1.0 ['ENSG00000026652|ENST00000320285|AGPAT4'] 36162 21703 GVFGGLWGTL True PC9_epitope_Rep3 1005.5283667644899 1005.52726993586 88.772 2 -0.700794372526633 0.20996689847854474 1.0 ['nc|ENSG00000073464|P51793-2|CLCN4', 'ENSG00000073464|ENST00000380833|CLCN4'] 101052 9392 SLTNRQVI True PC9_epitope_Rep1 929.52942939365 929.52832993586 40.985 2 -0.7008737571595773 0.2100092622116947 1.0 ['ENSG00000198633|ENST00000433050|ZNF534', 'nc|ENSG00000198633|Q76KX8|ZNF534'] 25228 12661 FECKGQFYDYF True PC9_epitope_Rep1 1445.5961886241296 1445.5950899358602 53.57 2 -0.7009211286404688 0.21004205699710005 1.0 ['ENSG00000082497|ENST00000367012|SERTAD4'] 80834 8738 PLTSDKNRI True H1975_Epitope_Rep1 1042.57710786206 1042.5760099358602 38.539 2 -0.7009613731251608 0.21004205699710005 1.0 ['ENSG00000274209|ENST00000620264|ANTXRL'] 64504 3828 LQYRRLRKGY True NCI_RA007_Epitope_Rep1 1351.7836870137098 1351.78204490379 18.895 3 -0.700966012286165 0.21004205699710005 1.0 ['nc|ENSG00000080166|P40126-2|DCT', 'ENSG00000080166|ENST00000377028|DCT'] 63139 20125 LNQNWDVK True PC9_epitope_Rep1 1015.5086939490699 1015.50758993586 82.241 2 -0.7009824487691594 0.21004205699710005 1.0 ['ENST00000593477.1_1_19:41312411-41313222:+|nuORF', 'nc|ENSG00000269858|Q96KS0-2|EGLN2', 'ENSG00000269858|ENST00000303961|EGLN2'] 138126 4250 YQKEIMERPP True H1975_Epitope_Rep2 1289.6438075228896 1289.64217490379 21.457 3 -0.7010237221170006 0.21005086161087072 1.0 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96', 'PHLDB2-CD96|1|fusion', 'PHLDB2-CD96|2|fusion'] 52850 11611 KRAERRREYYE True NCI_RA007_Epitope_Rep2 1554.80152190582 1554.8004299358602 49.756 2 -0.701083067170191 0.21005086161087072 1.0 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'ENST00000592056.5_1_19:45543470-45556151:+|nuORF'] 33364 13106 GLELERSELFK True H1975_Epitope_Rep3 1319.7085159544297 1319.7074099358601 55.657 2 -0.7011477325577351 0.21007803722709745 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 107624 5943 TAGWWRWAVAP True NCI_RA007_Epitope_Rep4 1299.6512758618298 1299.6496349037902 29.479 3 -0.7011700685584592 0.21009002990875553 1.0 ['ENST00000335464.9_1_17:72835313-72835379:+|nuORF'] 99329 11863 SLDPRLPALQ True H1975_Epitope_Rep1 1108.6240580544797 1108.62296993586 50.63 2 -0.7012618555680714 0.21009883253123623 1.0 ['ENST00000377320.3_1_1:9712717-9713065:-|nuORF'] 4944 7991 ALHVALQRHQL True PC9_epitope_Rep5 1284.7414878485602 1284.73984490379 35.676 3 -0.7012749354191067 0.21009883253123623 1.0 ['nc|ENSG00000197530|Q96AX9-10|MIB2', 'nc|ENSG00000197530|Q96AX9-8|MIB2', 'nc|ENSG00000197530|Q96AX9-4|MIB2', 'nc|ENSG00000197530|Q96AX9-6|MIB2', 'nc|ENSG00000197530|Q96AX9-3|MIB2', 'ENSG00000197530|ENST00000355826|MIB2', 'ENST00000479659.5_1_1:1561777-1565907:+|nuORF', 'nc|ENSG00000197530|Q96AX9-7|MIB2', 'nc|ENSG00000197530|Q96AX9-5|MIB2', 'ENST00000511502.5_1_1:1563563-1565907:+|nuORF', 'ENST00000506488.5_1_1:1562112-1565907:+|nuORF'] 129848 25485 VTLIVSVLTV True PC9_epitope_Rep1 1042.6637976081402 1042.66327496793 103.02 1 -0.7013644354368336 0.21014118718688327 1.0 ['ENSG00000174599|ENST00000310754|TRAM1L1'] 59643 6020 LGSMKPWNYK True H1975_Epitope_Rep3 1222.61686449906 1222.61576993586 28.168 2 -0.701372421568893 0.2101499878552344 1.0 ['nc|ENSG00000056998|O15488-6|GYG2', 'GYG2|p.P319Afs*14|1|0.21|ENSG00000056998|chrX:2861538-2861539|-/G|frameshift_variant', 'ENST00000381161.5_1_X:2748138-2799251:+|nuORF', 'nc|ENSG00000056998|O15488-5|GYG2', 'nc|ENSG00000056998|O15488-4|GYG2', 'nc|ENSG00000056998|O15488-3|GYG2', 'ENSG00000056998|ENST00000398806|GYG2', 'nc|ENSG00000056998|O15488|GYG2'] 113404 10306 TQLLSRKE True PC9_epitope_Rep2 973.5556441414899 973.55454993586 44.97 2 -0.7013931584305992 0.2101499878552344 1.0 ['ENST00000316418.9_1_5:424040-432966:+|nuORF', 'ENST00000505113.5_1_5:424040-432966:+|nuORF'] 55660 14956 LDAQVKELVLK True NCI_RA007_Epitope_Rep2 1254.7547378708598 1254.75364993586 62.856 2 -0.701421093187285 0.21017715907883353 1.0 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 78093 20505 PAMSQYITV True PC9_epitope_Rep4 1008.4950180308799 1008.49392993586 87.022 2 -0.7016251625339214 0.21026505146188176 1.0 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant', 'ENST00000237724.9_1_1:220369588-220445709:-|nuORF'] 130556 19678 VTYIVHQSAI True PC9_epitope_Rep5 1129.61315901761 1129.61206993586 80.745 2 -0.7016672578177441 0.21028902787054465 1.0 ['ADGRA1|p.R47L|2|0.36|ENSG00000197177|chr10:133098648-133098648|G/T|missense_variant', 'ENSG00000197177|ENST00000392607|ADGRA1', 'nc|ENSG00000197177|Q86SQ6-1|ADGRA1'] 20448 15117 EPRLRLLPQSP True H1975_Epitope_Rep3 1304.75646920636 1304.75536993586 63.547 2 -0.7016756380047006 0.21028902787054465 1.0 ['ENST00000408912.7_1_16:31469417-31469621:+|nuORF'] 39991 24000 HQRLIFRLLKL True H1975_Epitope_Rep3 1435.9139729072697 1435.91286993586 100.02 2 -0.70178337295681 0.21031300282340082 1.0 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5'] 74555 19031 NLCLILLLN True PC9_epitope_Rep3 1027.60998821347 1027.6088899358601 78.423 2 -0.701825133202545 0.21031300282340082 1.0 ['ENST00000390006.8_1_17:80426676-80426727:+|nuORF'] 13619 6844 DPSTFLRMWGP True H1975_Epitope_Rep2 1305.6175927750498 1305.61648993586 31.241 2 -0.7018512803651185 0.21033378364019975 1.0 ['ENST00000394224.3_1_11:65407601-65408454:+|nuORF'] 99418 12082 SLEFIRRPETK True NCI_RA007_Epitope_Rep2 1374.76194850962 1374.76084993586 51.59 2 -0.7018612075848433 0.21033378364019975 1.0 ['HELZ2|p.V561F|1|0.19|ENSG00000130589|chr20:63568407-63568407|C/A|missense_variant'] 121802 12444 VGNALLNVVL True NCI_RA007_Epitope_Rep4 1010.61243074162 1010.61132993586 54.874 2 -0.7018634717740457 0.21033378364019975 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'ENST00000479213.1_1_6:131914123-131917288:-|nuORF'] 79528 19345 PGRQTRRPKR True NCI_RA007_Epitope_Rep4 1250.7432191840596 1250.74156490379 83.666 3 -0.701951502471555 0.21037293383725694 1.0 ['nc|ENSG00000103168|Q15572-2|TAF1C', 'ENSG00000103168|ENST00000566732|TAF1C', 'nc|ENSG00000103168|Q15572|TAF1C', 'ENST00000564774.5_1_16:84212549-84214094:-|nuORF', 'nc|ENSG00000103168|Q15572-5|TAF1C', 'ENST00000564208.5_1_16:84212549-84215086:-|nuORF', 'nc|ENSG00000103168|Q15572-4|TAF1C'] 112504 17066 TNTVGEVIE True PC9_epitope_Rep1 960.4763907612798 960.47584496793 70.469 1 -0.7019561078821525 0.21037293383725694 1.0 ['ENSG00000153179|ENST00000542104|RASSF3'] 82114 6514 PTATESLPPWS True NCI_RA007_Epitope_Rep2 1184.57135377528 1184.5702499358601 29.948 2 -0.7020035651148875 0.21039690369583364 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 22866 15661 EVERKSKMI True PC9_epitope_Rep2 1118.61177911862 1118.6106899358601 65.516 2 -0.7020243168323265 0.21039690369583364 1.0 ['nc|ENSG00000187398|Q86TE4-3|LUZP2', 'nc|ENSG00000187398|Q86TE4-2|LUZP2', 'ENST00000405855.6_1_11:24518789-24853530:+|nuORF', 'ENST00000531187.5_1_11:24518651-24912476:+|nuORF', 'nc|ENSG00000187398|Q86TE4-4|LUZP2', 'ENSG00000187398|ENST00000336930|LUZP2'] 78376 20987 PAVADLLLQ True PC9_epitope_Rep5 938.54368247546 938.54258993586 85.788 2 -0.7020875486117839 0.21040569459832745 1.0 ['ENSG00000204347|ENST00000375366|BTBD17'] 19665 7217 ELRWERERERE True NCI_RA007_Epitope_Rep2 1586.7913511449399 1586.78971490379 32.691 3 -0.7020925848865643 0.21040569459832745 1.0 ['GSE1|p.R339W|1|0.81|ENSG00000131149|chr16:85656368-85656368|C/T|missense_variant'] 17492 11563 EHHKETEYK True NCI_RA007_Epitope_Rep2 1199.55710069347 1199.5560099358602 49.566 2 -0.7021159701638588 0.21043285575522097 1.0 ['nc|ENSG00000145730|P19021-6|PAM', 'nc|ENSG00000145730|P19021-2|PAM', 'ENSG00000145730|ENST00000438793|PAM', 'nc|ENSG00000145730|P19021-5|PAM', 'nc|ENSG00000145730|P19021-4|PAM', 'nc|ENSG00000145730|P19021-3|PAM', 'ENST00000505372.1_1_5:102295723-102310166:+|nuORF'] 63399 10469 LPGDKGELGP True H1975_Epitope_Rep1 981.5131106231698 981.51200993586 45.224 2 -0.7021736241820132 0.2104560285302375 1.0 ['ENST00000472880.1_1_20:61464332-61467329:+|nuORF', 'ENST00000462700.5_1_20:61464332-61468449:+|nuORF', 'ENST00000469852.5_1_20:61463352-61467329:+|nuORF', 'ENST00000481800.1_1_20:61463177-61467329:+|nuORF', 'ENST00000469802.5_1_20:61464332-61467763:+|nuORF', 'ENST00000466192.5_1_20:61463352-61472081:+|nuORF', 'ENSG00000092758|ENST00000649368|COL9A3'] 71021 19766 MESLDGLHLP True H1975_Epitope_Rep2 1110.5379454720198 1110.5368499358601 82.003 2 -0.7021931861515087 0.2104560285302375 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 55114 8219 LALRRRPWRI True NCI_RA007_Epitope_Rep5 1335.8363912929099 1335.8352899358601 38.294 2 -0.7021936877222367 0.2104560285302375 1.0 ['ENST00000517669.1_1_5:172410843-172410900:+|nuORF'] 7081 13003 AQWRGEERPR True NCI_RA007_Epitope_Rep5 1283.6483157397097 1283.64667490379 56.694 3 -0.7021985097305037 0.2104560285302375 1.0 ['ENST00000545897.5_1_1:161200091-161200277:+|nuORF'] 110424 8994 TINFQDGE True PC9_epitope_Rep3 922.4032258210199 922.40212993586 39.54 2 -0.7022009995174817 0.2104560285302375 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6', 'nc|ENSG00000119121|Q9BX84-6|TRPM6', 'nc|ENSG00000119121|Q9BX84-5|TRPM6', 'nc|ENSG00000119121|Q9BX84-7|TRPM6'] 93107 10399 RRRPLLLSLL True NCI_RA007_Epitope_Rep1 1235.8190098932698 1235.81737490379 44.433 3 -0.7022048788970184 0.2104560285302375 1.0 ['ENSG00000179580|ENST00000569714|RNF151'] 57049 4099 LEEGGKGK True NCI_RA007_Epitope_Rep4 816.4341320264799 816.43302993586 22.044 2 -0.7022117585857773 0.2104560285302375 1.0 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 18485 19032 EKLQETKEKV True NCI_RA007_Epitope_Rep3 1230.68196685342 1230.68032490379 83.145 3 -0.7022347181179973 0.21046801019788758 1.0 ['ENSG00000177150|ENST00000651643|FAM210A'] 115408 12708 TVEWLRQRY True H1975_Epitope_Rep1 1249.6567551650899 1249.65564993586 53.938 2 -0.702260431054095 0.2104855842185129 1.0 ['nc|ENSG00000031003|Q9NYF5-2|FAM13B', 'nc|ENSG00000031003|Q9NYF5|FAM13B', 'ENSG00000031003|ENST00000689681|FAM13B'] 102142 8705 SPRGREDRRR True H1975_Epitope_Rep3 1283.69191188719 1283.6908099358602 38.483 2 -0.7022987590238658 0.2104855842185129 1.0 ['ENST00000540707.5_2_19:19144688-19153597:+|nuORF'] 138127 9541 YQKQQEDEKFL True H1975_Epitope_Rep1 1454.7041588499794 1454.7030699358602 41.622 2 -0.7023058725956448 0.2104855842185129 1.0 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A'] 106007 13191 SVLLSASKIL True PC9_epitope_Rep5 1029.64339651673 1029.6422899358602 55.744 2 -0.7023223522365943 0.2104855842185129 1.0 ['nc|ENSG00000168491|Q8TBZ0-2|CCDC110', 'ENSG00000168491|ENST00000307588|CCDC110'] 93283 16871 RRRWARVRFR True NCI_RA007_Epitope_Rep3 1457.8704853858496 1457.86882490379 74.235 3 -0.7023777177688453 0.21052791308174382 1.0 ['ENSG00000249715|ENST00000624922|FER1L5'] 129384 6416 VTEFLQQK True NCI_RA007_Epitope_Rep5 991.53384606775 991.53274993586 31.35 2 -0.7024698612262106 0.21061576279930808 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-2|CDK5RAP3', 'ENST00000582482.1_1_17:46058511-46058865:+|nuORF', 'nc|ENSG00000108465|Q96JB5-3|CDK5RAP3'] 85233 13849 QKKKKKKKK True PC9_epitope_Rep1 1170.8288463009796 1170.82720490379 58.112 3 -0.702521602781483 0.21062454479242534 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 111647 9838 TLNVEQAAYTR True H1975_Epitope_Rep3 1264.6411646706 1264.64006993586 42.871 2 -0.7025498195275476 0.21062454479242534 1.0 ['ENSG00000142347|ENST00000644032|MYO1F', 'ENST00000594977.5_1_19:8612968-8642307:-|nuORF', 'ENST00000595191.1_1_19:8614980-8615536:-|nuORF', 'ENST00000600825.1_1_19:8612859-8615196:-|nuORF'] 119283 22673 VELKKQYAI True PC9_epitope_Rep1 1090.63864548946 1090.63754993586 92.015 2 -0.7025778705605668 0.21063652226689933 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 122251 16022 VGRRAAKA True NCI_RA007_Epitope_Rep5 827.5089687325898 827.5084249679301 68.354 1 -0.7026291138209627 0.21064849937790187 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 5573 4725 ANNVAYTTGKL True NCI_RA007_Epitope_Rep5 1150.59823722946 1150.5965849037902 24.858 3 -0.7026668347609251 0.2107051826677995 1.0 ['ENSG00000129151|ENST00000263182|BBOX1'] 90569 25306 RKGKKKKRWH True PC9_epitope_Rep3 1350.8472903297798 1350.8461899358601 102.75 2 -0.702704774911099 0.2107051826677995 1.0 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 57015 13452 LEEELDLLL True PC9_epitope_Rep3 1085.58560685709 1085.58450993586 56.788 2 -0.7027142114189184 0.2107051826677995 1.0 ['ENSG00000169857|ENST00000306730|AVEN'] 132265 5769 VYLAEKGEND True NCI_RA007_Epitope_Rep5 1136.5349682665599 1136.53333490379 28.878 3 -0.7027237465177587 0.2107051826677995 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 109171 7009 TFQWDKMWHWK True NCI_RA007_Epitope_Rep1 1591.73943924323 1591.73779490379 31.261 3 -0.702756390017347 0.2107051826677995 1.0 ['ENST00000594919.1_1_19:52839677-52851056:+|nuORF'] 102406 7056 SPVVPAPR True PC9_epitope_Rep4 821.47593726881 821.47484993586 34.403 2 -0.7027665447989538 0.2107051826677995 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 104113 1518 SRWTRAARPCS True NCI_RA007_Epitope_Rep5 1289.6411221842898 1289.63947490379 8.6519 3 -0.7028120267386505 0.2107475004930742 1.0 ['ENST00000480818.3_1_9:139838480-139838585:-|nuORF'] 94295 17528 RWSRRTLYVQ True PC9_epitope_Rep3 1363.74730150499 1363.7462099358602 72.606 2 -0.7029613240332512 0.21083213229158765 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 100716 10731 SLRGRRRPR True PC9_epitope_Rep1 1152.7064397525198 1152.7048049037899 46.164 3 -0.7029643921369677 0.21083213229158765 1.0 ['ENSG00000188263|ENST00000695950|IL17REL'] 100681 10517 SLQWRHRWDTP True PC9_epitope_Rep5 1480.7323797168397 1480.73074490379 45.441 3 -0.7030142459099213 0.210871247174477 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 81105 4767 PPGPGGGTL True NCI_RA007_Epitope_Rep3 751.38645355807 751.38534993586 25.714 2 -0.703019557067735 0.210871247174477 1.0 ['ENST00000430109.1_1_1:1369598-1369895:-|nuORF'] 66113 6121 LSNSTLIYF True H1975_Epitope_Rep2 1056.54916177872 1056.5480699358602 28.523 2 -0.7030318987954742 0.21088321854425196 1.0 ['ENSG00000157399|ENST00000381134|ARSL'] 3789 5135 AGVEQPGHV True PC9_epitope_Rep3 892.4402800360798 892.43918993586 24.837 2 -0.7031129013959321 0.2109375 1.0 ['ENST00000306688.7_1_17:79981719-79983267:+|nuORF', 'ENST00000583383.5_1_17:79981501-79983267:+|nuORF'] 63415 9913 LPGKAAGF True H1975_Epitope_Rep3 759.4279244472299 759.42682993586 43.162 2 -0.7031212822472419 0.2109375 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2'] 16745 8947 EEYEYMNRRRR True PC9_epitope_Rep4 1600.75285746124 1600.75120490379 41.958 3 -0.7031984816059239 0.21096463949272615 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 81157 26174 PPLCFFLLLL True PC9_epitope_Rep1 1174.68242487774 1174.68132993586 106.01 2 -0.7032475700893733 0.21100374679550385 1.0 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000600281.1_1_19:12776145-12777515:-|nuORF', 'ENST00000466794.5_1_19:12769146-12777470:-|nuORF'] 16744 8853 EEYEYMNRRRR True PC9_epitope_Rep4 1600.75285746124 1600.75120490379 41.584 3 -0.7032767550792978 0.21100374679550385 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 20127 10502 ENLIDYFIP True H1975_Epitope_Rep3 1122.55972646242 1122.5586299358602 45.46 2 -0.7032975216820164 0.21100931347268148 1.0 ['nc|ENSG00000186283|Q9H497-3|TOR3A', 'ENSG00000186283|ENST00000367627|TOR3A'] 78229 18742 PAPVILAAP True PC9_epitope_Rep2 847.51673945163 847.51564993586 77.466 2 -0.7032992553273891 0.21100931347268148 1.0 ['ENST00000377680.3_1_9:38621281-38621927:+|nuORF', 'ENST00000484285.2_1_9:38620779-38621927:+|nuORF'] 19077 11811 ELHIWKVVL True PC9_epitope_Rep3 1135.67536535135 1135.67371490379 50.447 3 -0.7033556055275149 0.21100931347268148 1.0 ['MYBPC2|p.G124W|2|0.18|ENSG00000086967|chr19:50436641-50436641|G/T|missense_variant'] 34357 14678 GPSRHTRS True NCI_RA007_Epitope_Rep3 896.4576614357201 896.45656993586 65.117 2 -0.7034012410159439 0.21102128111395937 1.0 ['ENST00000439696.2_1_14:69257207-69259821:-|nuORF', 'ENST00000553375.1_1_14:69257207-69262906:-|nuORF'] 59166 7359 LGFFFQSV True PC9_epitope_Rep3 943.4803539429098 943.47924993586 33.316 2 -0.7034527022385155 0.2110332483921854 1.0 ['ENST00000398637.9_1_12:46576929-46576956:-|nuORF'] 37110 7985 GVSSLSALVP True H1975_Epitope_Rep2 928.5229470308799 928.52184993586 35.663 2 -0.703542545191116 0.21107234946155012 1.0 ['ENSG00000241484|ENST00000356099|ARHGAP8', 'nc|ENSG00000241484|P85298-3|ARHGAP8', 'nc|ENSG00000241484|P85298|ARHGAP8'] 33369 12205 GLENLTAL True PC9_epitope_Rep4 829.4545331178899 829.45342993586 54.766 2 -0.7035593785606822 0.21107234946155012 1.0 ['ENSG00000122176|ENST00000354955|FMOD'] 72824 10165 NALDEKQL True NCI_RA007_Epitope_Rep5 929.4818104948899 929.48070993586 45.734 2 -0.7035876817276164 0.21109948279261653 1.0 ['ENSG00000134108|ENST00000256496|ARL8B', 'ENST00000455168.5_1_3:5164021-5220395:+|nuORF'] 128085 13763 VRRLVKILLLG True PC9_epitope_Rep3 1278.8863611770998 1278.8847149037902 58.022 3 -0.7036104313886734 0.21110504443837777 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 56771 8362 LEARGEALGL True H1975_Epitope_Rep3 1027.5662088251897 1027.5651099358602 37.147 2 -0.7036242820956642 0.21110504443837777 1.0 ['ENSG00000197172|ENST00000329342|MAGEA6', 'chrX:152698829-152700558|245|11.93|0.02|9.4|+|ENST00000598245|MAGEA3,MAGEA3', 'ENSG00000221867|ENST00000370278|MAGEA3', 'chrX:152751574-152753788|174|17.34|0.02|9.87|-|ENST00000611674|MAGEA2,MAGEA2', 'chrX:152751822-152752394|202|24.98|0.06|8.82|-|ENST00000623806|MAGEA2,MAGEA2', 'ENSG00000268606|ENST00000684311|MAGEA2', 'ENSG00000183305|ENST00000682532|MAGEA2B', 'chrX:152753623-152753788|178|10.09|0.02|9.31|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152753391-152753542|175|16.75|0.02|9.45|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152752513-152753788|203|29.14|0.06|8.98|-|ENST00000620710|MAGEA2,MAGEA2', 'chrX:152753391-152753788|192|21.18|0.03|9.4|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152751725|206|35.77|0.07|9.03|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152751574-152752394|220|50.13|0.12|8.73|-|ENST00000623438|MAGEA2,MAGEA2', 'chrX:152751428-152751509|251|75.14|0.18|8.7|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152714682-152716896|187|20.44|0.02|9.74|+|ENST00000370293|MAGEA2B,MAGEA2B', 'chrX:152752513-152753313|204|33.18|0.07|8.98|-|ENST00000623806|MAGEA2,MAGEA2', 'chrX:152716745-152716896|206|35.69|0.07|9.02|+|ENST00000447530|MAGEA2B,MAGEA2B', 'MAGEA3|p.A154Lfs*13|1|0.29|ENSG00000221867|chrX:152701292-152701292|G/-|frameshift_variant', 'chrX:152714682-152715079|194|21.52|0.03|9.39|+|ENST00000447530|MAGEA2B,MAGEA2B', 'chrX:152714928-152715079|175|17.06|0.02|9.51|+|ENST00000458057|MAGEA2B,MAGEA2B'] 63534 18271 LPLAAAPSF True H1975_Epitope_Rep1 885.49600400705 885.4954549679301 76.143 1 -0.7036621827633225 0.21110504443837777 1.0 ['ENST00000495607.5_1_22:50752441-50754573:-|nuORF'] 40885 7648 HVNWFRRDEA True H1975_Epitope_Rep3 1328.63741670284 1328.63630993586 34.4 2 -0.7036835484000897 0.21111700917570334 1.0 ['ENSG00000100889|ENST00000216780|PCK2', 'nc|ENSG00000100889|Q16822-3|PCK2'] 67629 9180 LTEWSEWSTCE True H1975_Epitope_Rep3 1369.54963235453 1369.5485299358602 40.301 2 -0.703805059915005 0.2111712695451719 1.0 ['ENSG00000144229|ENST00000409968|THSD7B'] 119452 11875 VEPRNTDFWKR True NCI_RA007_Epitope_Rep2 1446.7367963909398 1446.7356899358601 50.793 2 -0.7038060064250532 0.2111712695451719 1.0 ['ENST00000551739.5_1_12:56332068-56333318:+|nuORF', 'ENST00000552478.5_1_12:56331951-56332941:+|nuORF'] 100101 5794 SLKYLWEKDYQ True NCI_RA007_Epitope_Rep1 1471.73473070227 1471.7330849037899 26.591 3 -0.7039010500836789 0.21119199272065514 1.0 ['PLCXD3|p.Q210Rfs*2|2|0.17|ENSG00000182836|chr5:41382011-41382011|C/-|frameshift_variant', 'ENSG00000182836|ENST00000377801|PLCXD3'] 100717 10749 SLRGRRRPR True PC9_epitope_Rep5 1152.7064397525198 1152.7048049037899 46.338 3 -0.7039059190699009 0.21119199272065514 1.0 ['ENSG00000188263|ENST00000695950|IL17REL'] 92984 18801 RRQRLGQSP True H1975_Epitope_Rep2 1096.6213727158797 1096.62026993586 78.068 2 -0.703910937146444 0.21119199272065514 1.0 ['ENST00000451963.1_2_7:99816827-99817049:+|nuORF', 'ENST00000317271.2_1_7:99816887-99817430:+|nuORF'] 23445 5810 EVWKGIKKRQ True NCI_RA007_Epitope_Rep2 1270.7509899031 1270.74934490379 27.218 3 -0.7039957780495117 0.21120395505072717 1.0 ['ENSG00000007520|ENST00000007390|TSR3'] 101390 13249 SMYDYYDMDNY True H1975_Epitope_Rep2 1478.5006335567798 1478.4995299358602 56.092 2 -0.7040381178695068 0.2112127140105849 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 129951 19022 VTNEYLLQQLN True PC9_epitope_Rep3 1333.6877805098497 1333.6866899358602 78.389 2 -0.7040863522119493 0.2112127140105849 1.0 ['ENSG00000159708|ENST00000329956|LRRC36', 'nc|ENSG00000159708|Q1X8D7-3|LRRC36', 'nc|ENSG00000159708|Q1X8D7-2|LRRC36'] 69901 3816 LYDCVWRYN True NCI_RA007_Epitope_Rep2 1230.5491788620598 1230.5480899358602 19.477 2 -0.7041071832947379 0.21122467548222734 1.0 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 17373 5130 EHERPRRLRL True PC9_epitope_Rep1 1360.7799986155999 1360.7783549037902 24.585 3 -0.7041366889028063 0.21123663659109865 1.0 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 75245 12032 NPKQSGPGEWP True H1975_Epitope_Rep3 1195.5621860739097 1195.56108993586 51.442 2 -0.7041974432078209 0.2112637612592121 1.0 ['PCDHAC1|p.L897W|1|0.46|ENSG00000248383|chr5:141009735-141009735|T/G|missense_variant'] 81528 12727 PQVLEATA True PC9_epitope_Rep3 827.4388830537499 827.43778993586 53.975 2 -0.7043494918734583 0.21130604879676104 1.0 ['nc|ENSG00000140279|Q9NRD8|DUOX2', 'ENSG00000140279|ENST00000389039|DUOX2', 'ENST00000558383.1_1_15:45393877-45400429:-|nuORF', 'DUOX2|p.A777Lfs*26|1|0.16|ENSG00000140279|chr15:45105648-45105648|C/-|frameshift_variant'] 76393 10147 NSLGVVPYL True H1975_Epitope_Rep3 960.5280324113198 960.52692993586 44.074 2 -0.7044698821261649 0.21135388394414034 1.0 ['ENSG00000054598|ENST00000645831|FOXC1'] 43852 9418 ILCRWVVP True H1975_Epitope_Rep1 984.5578930709598 984.55678993586 41.139 2 -0.7045065429660863 0.21135388394414034 1.0 ['ENST00000313640.11_1_13:43460845-43460983:-|nuORF'] 130659 18735 VVAVRHLGRWC True NCI_RA007_Epitope_Rep3 1294.7080795452998 1294.70698993586 81.924 2 -0.7045170755134968 0.21135388394414034 1.0 ['ENST00000549824.1_1_12:53142751-53143132:+|nuORF'] 51872 7263 KKQFMKNCQ True NCI_RA007_Epitope_Rep2 1153.57361978809 1153.57198490379 32.872 3 -0.7045181162493362 0.21135388394414034 1.0 ['ENSG00000111536|ENST00000229134|IL26'] 85927 14654 QNVKQALVL True PC9_epitope_Rep6 1011.6076797143498 1011.60658993586 68.287 2 -0.7045422516699398 0.2113658418243571 1.0 ['nc|ENSG00000186376|P51815-2|ZNF75D', 'ENSG00000186376|ENST00000370766|ZNF75D'] 12464 2697 DKRRDYLKFKE True NCI_RA007_Epitope_Rep2 1496.8099613311995 1496.80777987172 14.717 4 -0.704544487174679 0.21137459441428874 1.0 ['ENSG00000168275|ENST00000366615|COA6', 'nc|ENSG00000168275|Q5JTJ3-3|COA6', 'nc|ENSG00000168275|Q5JTJ3|COA6'] 42485 9775 IEREMMIRNLE True H1975_Epitope_Rep3 1432.7166551933199 1432.71554993586 42.622 2 -0.7045676344942081 0.21137459441428874 1.0 ['ENSG00000152104|ENST00000366956|PTPN14', 'PTPN14|p.H1030Afs*47|1|0.17|ENSG00000152104|chr1:214369641-214369642|-/T|frameshift_variant'] 9094 15883 AVLDRNVAI True PC9_epitope_Rep2 969.5607295219299 969.55962993586 66.349 2 -0.7046654484450063 0.2114623607004776 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 16154 19329 EEEPLTIVKL True PC9_epitope_Rep4 1169.6543551232498 1169.65324993586 82.456 2 -0.7047451586822746 0.2114743162108072 1.0 ['nc|ENSG00000154743|Q8NCE0-2|TSEN2'] 7306 18479 ARRKELEEKMV True H1975_Epitope_Rep2 1387.76056861063 1387.7594699358601 76.679 2 -0.7047809227032554 0.21148627135861242 1.0 ['ENSG00000006788|ENST00000252172|MYH13', 'ENSG00000092054|ENST00000355349|MYH7', 'ENSG00000197616|ENST00000405093|MYH6'] 67446 9836 LTEAYEKWREW True NCI_RA007_Epitope_Rep1 1509.7252286477296 1509.7241299358602 42.263 2 -0.7048262728063327 0.21152534150002275 1.0 ['nc|ENSG00000113657|Q14195|DPYSL3', 'DPYSL3|p.A516Qfs*15|1|0.67|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant', 'ENSG00000113657|ENST00000343218|DPYSL3'] 73488 8144 NEYGSYNKDP True H1975_Epitope_Rep2 1185.4938317305698 1185.49272993586 36.276 2 -0.7048299355952479 0.21152534150002275 1.0 ['ENSG00000149328|ENST00000535456|GLB1L2', 'ENST00000529077.5_1_11:134217001-134229456:+|nuORF', 'ENST00000531081.5_1_11:134217240-134234349:+|nuORF'] 100781 7722 SLRQYKEK True NCI_RA007_Epitope_Rep1 1050.5821932425 1050.58108993586 34.029 2 -0.7048385224834056 0.21153408832491927 1.0 ['PTPRR|p.D262Y|1|0.19|ENSG00000153233|chr12:70746041-70746041|C/A|missense_variant'] 73207 8799 NEFLQLSLP True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 38.771 2 -0.7048561699261137 0.21153408832491927 1.0 ['ENSG00000196267|ENST00000682614|ZNF836'] 75829 7126 NRDLATPVM-[Oxidation] True PC9_epitope_Rep1 1031.50698007735 1031.50588993586 32.219 2 -0.704950977112538 0.21167927474493275 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 26900 14271 FLFYIEVL True PC9_epitope_Rep1 1042.57391997458 1042.57282993586 59.717 2 -0.7049585264723234 0.21167927474493275 1.0 ['GRIN2D|p.S202F|1|0.15|ENSG00000105464|chr19:48404873-48404873|C/T|missense_variant'] 79787 6627 PHYSVNALAL True PC9_epitope_Rep2 1083.57129420563 1083.57018993586 30.902 2 -0.7049942298592077 0.21169122551694863 1.0 ['ENSG00000105392|ENST00000221996|CRX'] 94298 15491 RWSRRTLYVQ True PC9_epitope_Rep6 1363.74730150499 1363.7462099358602 71.763 2 -0.7050170332346314 0.21173349503524597 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 125370 14574 VLSSAGFEAI True PC9_epitope_Rep3 992.51786165044 992.51676993586 61.185 2 -0.7050859149490244 0.2117606039474881 1.0 ['nc|ENSG00000177752|Q8N8F6-2|YIPF7'] 41337 6357 IALIGSGW True NCI_RA007_Epitope_Rep2 815.45413919507 815.45304993586 29.333 2 -0.7051240609694094 0.21177255294313824 1.0 ['SS18L1-GPR108|1|fusion', 'ENSG00000125734|ENST00000264080|GPR108'] 110307 14581 TIHNITPGDA True PC9_epitope_Rep5 1037.5141732523298 1037.5130699358601 61.087 2 -0.7051819841992385 0.21178450157652196 1.0 ['ADGRF5|p.W968Gfs*8|1|0.1|ENSG00000069122|chr6:46859002-46859002|C/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'ADGRF5|p.D355Tfs*11|1|0.2|ENSG00000069122|chr6:46878380-46878380|T/-|frameshift_variant'] 38835 19356 HIFVNFHLP True PC9_epitope_Rep6 1122.59744938382 1122.5963499358602 87.101 2 -0.7052279162262872 0.21179323935122024 1.0 ['nc|ENSG00000157765|O95436-2|SLC34A2', 'ENSG00000157765|ENST00000382051|SLC34A2'] 22655 8637 ETSAVIIAAP True NCI_RA007_Epitope_Rep1 970.5335117145798 970.53240993586 37.598 2 -0.7052283953970603 0.21179323935122024 1.0 ['nc|ENSG00000132842|O00203-3|AP3B1', 'ENSG00000132842|ENST00000255194|AP3B1'] 81355 23365 PPRRGGVLLG True PC9_epitope_Rep6 1020.6192474575597 1020.61867496793 102.98 1 -0.7052829835540075 0.21182266009852216 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 80700 10962 PLPVPPPTG True PC9_epitope_Rep6 873.49600400705 873.49490993586 53.053 2 -0.7052842314802596 0.21182266009852216 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 57007 5768 LEEEFYSLVR True H1975_Epitope_Rep2 1283.63976768827 1283.63812490379 27.181 3 -0.7053005930734123 0.21182266009852216 1.0 ['ENSG00000102221|ENST00000614628|JADE3'] 65802 16024 LSKALADI True H1975_Epitope_Rep3 829.49091862661 829.49037496793 67.093 1 -0.7053032613122808 0.21182266009852216 1.0 ['ENSG00000145725|ENST00000358359|PPIP5K2', 'nc|ENSG00000145725|O43314-2|PPIP5K2'] 126350 7815 VPKTPAPDGP True H1975_Epitope_Rep2 977.5181960036098 977.51708993586 35.007 2 -0.7053888940944303 0.21182266009852216 1.0 ['PNPLA6|p.D881Tfs*24|1|0.35|ENSG00000032444|chr19:7554696-7554696|G/-|frameshift_variant', 'ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 121060 18103 VGFRWACASWP True PC9_epitope_Rep1 1278.5967977608198 1278.59515490379 74.426 3 -0.705405099393147 0.21183460652358432 1.0 ['ENST00000441788.6_1_19:3535369-3535978:+|nuORF'] 122053 14442 VGQTYSSV True PC9_epitope_Rep1 839.4024975450299 839.40194496793 60.375 1 -0.7054274840295491 0.21184655258650742 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'OBSCN|p.H4054Tfs*31|1|0.21|ENSG00000154358|chr1:228307133-228307133|C/-|frameshift_variant', 'OBSCN|p.R2782Lfs*22|1|0.23|ENSG00000154358|chr1:228282079-228282080|-/T|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 125565 9874 VLYNRISHPQK True H1975_Epitope_Rep3 1353.7517181790902 1353.7506299358602 43.009 2 -0.7055518379054154 0.21187044362600221 1.0 ['TNNT1|p.A261P|1|0.59|ENSG00000105048|chr19:55133897-55133897|C/G|missense_variant'] 16742 6151 EEYEYMNRRRR True PC9_epitope_Rep4 1600.75285746124 1600.75120490379 30.682 3 -0.7055584058994053 0.21187044362600221 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 29022 9610 FTKRLVKVT True H1975_Epitope_Rep1 1090.6862643882198 1090.6851699358601 41.89 2 -0.7055752361741222 0.21188238860260686 1.0 ['ENSG00000168496|ENST00000305885|FEN1', 'nc|ENSG00000168496|P39748-2|FEN1'] 85412 6413 QLENEKQK True H1975_Epitope_Rep1 1015.5298233164698 1015.52872993586 29.726 2 -0.7056051736547818 0.21190948909534563 1.0 ['nc|ENSG00000100014|Q69YQ0-2|SPECC1L', 'ENSG00000100014|ENST00000314328|SPECC1L'] 126606 10435 VPPPPPPPP True PC9_epitope_Rep1 893.50108938749 893.49998993586 45.026 2 -0.7056361177025934 0.21195174441514353 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'ENST00000494373.1_1_2:54014190-54014463:+|nuORF', 'ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1081Kfs*25|2|0.4|ENSG00000139734|chr13:59774745-59774746|-/T|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3', 'nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'ENSG00000135250|ENST00000393651|SRPK2', 'nc|ENSG00000135250|P78362|SRPK2', 'nc|ENSG00000154380|Q8N8S7-3|ENAH', 'ENSG00000154380|ENST00000366843|ENAH', 'nc|ENSG00000154380|Q8N8S7|ENAH', 'ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4', 'ENSG00000188316|ENST00000341276|ENO4', 'nc|ENSG00000187164|A0MZ66-2|SHTN1', 'nc|ENSG00000187164|A0MZ66-8|SHTN1', 'nc|ENSG00000187164|A0MZ66-4|SHTN1', 'nc|ENSG00000187164|A0MZ66-5|SHTN1', 'nc|ENSG00000187164|A0MZ66-6|SHTN1', 'ENSG00000187164|ENST00000355371|SHTN1', 'nc|ENSG00000187164|A0MZ66-3|SHTN1'] 16740 5987 EEYEYMNRRRR True PC9_epitope_Rep4 1600.75285746124 1600.75120490379 29.981 3 -0.7057051163401405 0.21195726301432144 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 128096 24625 VRRRFKGQI True PC9_epitope_Rep4 1158.7097937974597 1158.70868993586 103.21 2 -0.7057198192861066 0.21195726301432144 1.0 ['ENSG00000144713|ENST00000429711|RPL32', 'ENST00000452606.2_1_3:12880846-12881736:-|nuORF'] 56075 8470 LDLENDKQQLD True NCI_RA007_Epitope_Rep2 1329.6412242402498 1329.6401299358602 37.59 2 -0.7057379484000583 0.21195726301432144 1.0 ['ENSG00000109063|ENST00000583535|MYH3'] 122144 17466 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 73.969 1 -0.7058164759075723 0.2119779353821907 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 13063 16660 DLRLPPVVP True PC9_epitope_Rep6 1004.6018660579199 1004.60076993586 76.552 2 -0.7058260093295089 0.2119779353821907 1.0 ['nc|ENSG00000196535|Q92614-3|MYO18A', 'nc|ENSG00000196535|Q92614-4|MYO18A', 'ENSG00000196535|ENST00000527372|MYO18A', 'MYO18A|p.P202L|1|0.43|ENSG00000196535|chr17:29166336-29166336|G/A|missense_variant'] 70614 384 MACGCDCDCNH True NCI_RA007_Epitope_Rep1 1170.30209158806 1170.3004349037901 2.0459 3 -0.7058415822618804 0.2119779353821907 1.0 ['ENST00000451025.6_2_6:43608345-43608465:+|nuORF'] 123382 9588 VIDAKFETKAR True H1975_Epitope_Rep1 1276.71393568804 1276.71282993586 41.805 2 -0.7059573756045573 0.21203212607970906 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'ATRX|p.C1026Vfs*7|1|0.1|ENSG00000085224|chrX:77682180-77682180|A/-|frameshift_variant', 'nc|ENSG00000085224|P46100-6|ATRX'] 128504 11221 VSGALRWSRR True PC9_epitope_Rep5 1186.6683229082998 1186.66666490379 48.151 3 -0.7059670220352346 0.21203212607970906 1.0 ['ENST00000289431.9_1_20:48525041-48531957:-|nuORF'] 9887 12706 AYNDVGKTSAY True H1975_Epitope_Rep1 1187.54586730343 1187.5447699358601 53.93 2 -0.7059982612620613 0.2120711601406231 1.0 ['ENSG00000157404|ENST00000288135|KIT', 'nc|ENSG00000157404|P10721-2|KIT'] 100991 15304 SLSWTQEAY True PC9_epitope_Rep5 1083.48728979815 1083.48618993586 63.876 2 -0.7060098575662782 0.2120711601406231 1.0 ['nc|ENSG00000075399|Q9Y2B5-2|VPS9D1'] 136142 6370 YGGLRGAI True PC9_epitope_Rep4 805.4446371405298 805.44354993586 31.585 2 -0.7060571581794245 0.21208309972269787 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 22116 5981 ESWCSPQIK True NCI_RA007_Epitope_Rep3 1076.49608066004 1076.49498993586 30.507 2 -0.7060750936169246 0.21209503894293422 1.0 ['ENST00000538503.5_1_12:121881458-121882696:-|nuORF'] 92318 6157 RQLREYQEL True NCI_RA007_Epitope_Rep4 1233.6465844042098 1233.64492490379 30.294 3 -0.7061359627595898 0.21210055002500114 1.0 ['nc|ENSG00000170421|P05787-2|KRT8', 'CON__P05787', 'ENSG00000170421|ENST00000692008|KRT8', 'ENST00000546583.5_1_12:53291214-53294602:-|nuORF', 'ENST00000547031.5_1_12:53292389-53294972:-|nuORF', 'KRT8|p.N379T|1|0.24|ENSG00000170421|chr12:52898745-52898745|T/G|missense_variant', 'CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1', 'ENST00000552322.5_1_12:52638288-52642544:+|nuORF', 'CON__Q9DCV7', 'ENST00000548657.5_1_12:52639243-52641994:+|nuORF', 'CON__Q9NSB2', 'CON__H-INV:HIT000292931'] 119098 16143 VEIDGERIKI True PC9_epitope_Rep5 1170.66083748602 1170.65920490379 67.082 3 -0.7061446529729335 0.21210055002500114 1.0 ['ENSG00000172007|ENST00000305626|RAB33B'] 68542 8390 LTWDTCYFHYL True PC9_epitope_Rep1 1460.6434731697202 1460.6418149037902 37.108 3 -0.7061563652385091 0.21210055002500114 1.0 ['nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1'] 66490 8763 LSRWHELRRFW True NCI_RA007_Epitope_Rep1 1584.8425988721597 1584.84094490379 38.087 3 -0.7061916392478067 0.2121427922058244 1.0 ['ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 19936 7175 ELYREKYDWRR True NCI_RA007_Epitope_Rep1 1612.8110239603598 1612.80881987172 31.898 4 -0.7062093986905738 0.21217217399209126 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 112419 9681 TNIENNNNKFY True NCI_RA007_Epitope_Rep2 1369.6262428824498 1369.62514993586 42.275 2 -0.7062622107046137 0.21217217399209126 1.0 ['ENSG00000041880|ENST00000398755|PARP3', 'nc|ENSG00000041880|Q9Y6F1-2|PARP3', 'ENST00000470601.5_1_3:51977371-51978822:+|nuORF'] 57294 12066 LEGILRELKE True NCI_RA007_Epitope_Rep2 1198.6921376142998 1198.69104993586 51.526 2 -0.7062661097849928 0.21217217399209126 1.0 ['ENSG00000205363|ENST00000569673|INSYN1'] 132713 12210 VYSEVHFTL True NCI_RA007_Epitope_Rep3 1093.54441075145 1093.5433099358602 55.166 2 -0.7062678229804614 0.21217217399209126 1.0 ['ENSG00000171992|ENST00000307662|SYNPO', 'nc|ENSG00000171992|Q8N3V7-3|SYNPO', 'nc|ENSG00000171992|Q8N3V7|SYNPO'] 80789 10293 PLSRTNSI True PC9_epitope_Rep2 886.4872302285 886.48612993586 44.921 2 -0.7062687456511015 0.21217217399209126 1.0 ['ENSG00000235711|ENST00000421388|ANKRD34C'] 130395 16659 VTVNSLGV True PC9_epitope_Rep5 787.44396843419 787.44286993586 69.086 2 -0.7063248047120824 0.21218411005393611 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 82398 7848 PVAEVAAP True H1975_Epitope_Rep2 752.4068546494799 752.40630496793 35.137 1 -0.7064130393652022 0.21220798109262795 1.0 ['ENST00000489976.1_1_1:45278922-45279441:+|nuORF', 'ENST00000485668.5_1_1:45278776-45279441:+|nuORF', 'ENSG00000222009|ENST00000450269|BTBD19'] 62239 11409 LLQANVQQDGK True H1975_Epitope_Rep3 1212.64625005104 1212.6451499358602 49.001 2 -0.7064163895907517 0.21220798109262795 1.0 ['ENSG00000102755|ENST00000282397|FLT1', 'nc|ENSG00000102755|P17948-6|FLT1', 'nc|ENSG00000102755|P17948-5|FLT1', 'nc|ENSG00000102755|P17948-7|FLT1', 'nc|ENSG00000102755|P17948-8|FLT1'] 94052 20602 RVRRTRRGAAA True NCI_RA007_Epitope_Rep4 1268.7650172578 1268.76392993586 89.229 2 -0.7064928396716015 0.21223506597785083 1.0 ['ENST00000460734.5_1_21:46494558-46536853:+|nuORF', 'ENST00000437626.5_1_21:46494558-46548358:+|nuORF'] 11330 5618 DEYEAHQERVL True H1975_Epitope_Rep1 1387.6368075661499 1387.6351649037902 26.676 3 -0.7064999360581095 0.21224056961066506 1.0 ['ENST00000442955.2_1_9:6669517-6669934:-|nuORF', 'ENSG00000121481|ENST00000367510|RNF2'] 43383 9659 IHPYPNNIL True PC9_epitope_Rep6 1079.57637958607 1079.5752899358602 47.515 2 -0.7065125610155019 0.21224056961066506 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B', 'nc|ENSG00000188649|Q6DHV5-1|CC2D2B', 'nc|ENSG00000188649|Q6DHV5-2|CC2D2B'] 31433 3958 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 20.354 2 -0.7065210303161786 0.21224056961066506 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 119612 11193 VERYLEEFP True PC9_epitope_Rep1 1180.57643915572 1180.57480490379 47.936 3 -0.7065984070135714 0.21228280135128993 1.0 ['ENSG00000127080|ENST00000287996|IPPK'] 80445 19848 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 83.097 3 -0.7066735101334712 0.21232503181239776 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 87424 5196 QTEDQYIFCYQ True H1975_Epitope_Rep3 1436.5918315196798 1436.59018490379 25.076 3 -0.7067069709605842 0.2123424624333495 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 7892 9140 ATAQQASLP True PC9_epitope_Rep2 885.4555957470499 885.45448993586 40.498 2 -0.7067120374755557 0.2123424624333495 1.0 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10'] 74989 3108 NLVWSYYQSWF True NCI_RA007_Epitope_Rep1 1491.68230120659 1491.6806549037901 15.978 3 -0.7067219140608534 0.2123424624333495 1.0 ['chrX:97120275-97141665|243|53.54|0.12|8.77|+|2|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|7'] 81346 25032 PPRRGGVLLG True NCI_RA007_Epitope_Rep5 1020.6192474575597 1020.61867496793 103.79 1 -0.7067313436867019 0.2123424624333495 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 113008 12878 TPTLVEVS True PC9_epitope_Rep6 844.45419876472 844.45310993586 61.057 2 -0.7067597399333753 0.21236954117878729 1.0 ['CON__P02769', 'ENSG00000163631|ENST00000295897|ALB', 'CON__P02768-1', 'nc|ENSG00000163631|P02768-3|ALB', 'nc|ENSG00000163631|P02768-2|ALB'] 53023 13302 KRRRQEWERQY True H1975_Epitope_Rep1 1633.85495446101 1633.8538499358601 56.271 2 -0.7067668269843 0.212381471719834 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 81345 24924 PPRRGGVLLG True NCI_RA007_Epitope_Rep5 1020.6192474575597 1020.61867496793 103.37 1 -0.7068192443787258 0.2123934018994532 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 59410 10839 LGLRPLHQL True PC9_epitope_Rep6 1045.63964854897 1045.63854993586 52.55 2 -0.7068425913029386 0.21240533171766132 1.0 ['ENST00000318430.9_1_17:76134666-76137438:+|nuORF'] 28232 4675 FRSATTSGAPG True NCI_RA007_Epitope_Rep4 1050.50942222506 1050.50832993586 24.404 2 -0.7068941917201579 0.212425972767066 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 79424 12185 PGPDPSLDRML True PC9_epitope_Rep5 1196.5859582935998 1196.58430490379 51.859 3 -0.7068991652118675 0.212425972767066 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1', 'ENST00000483926.5_1_1:27668800-27676624:+|nuORF', 'ENST00000490170.5_1_1:27674035-27676436:+|nuORF'] 63573 9674 LPLIVKHIRK True NCI_RA007_Epitope_Rep4 1215.8179472641098 1215.81631490379 44.06 3 -0.7069430283816013 0.212425972767066 1.0 ['ENSG00000179213|ENST00000601727|SIGLECL1'] 99784 14636 SLGQRVLL True PC9_epitope_Rep2 884.5443511817999 884.54324993586 61.565 2 -0.7070150860917412 0.21243695951778763 1.0 ['nc|ENSG00000178149|Q5D0E6-3|DALRD3', 'ENST00000498794.1_1_3:49055454-49055997:-|nuORF', 'ENST00000484831.5_1_3:49054806-49055997:-|nuORF', 'ENST00000460505.5_1_3:49053470-49055997:-|nuORF', 'nc|ENSG00000178149|Q5D0E6-2|DALRD3', 'ENSG00000178149|ENST00000341949|DALRD3'] 12943 5633 DLNSLQSP True H1975_Epitope_Rep2 872.4239612655999 872.42286993586 26.667 2 -0.7070199905207261 0.21243695951778763 1.0 ['chr6:52269226-52271383|101|11.51|0.38|4.94|-|2|TE_info:AluSp,AluSp_dup17300,Alu,SINE,donor,+,52271383,52271674|MCM3,None|2'] 65626 11810 LSGPLFGAYT True PC9_epitope_Rep4 1024.5229470308798 1024.52184993586 53.194 2 -0.7070550963383337 0.21243695951778763 1.0 ['ENSG00000158163|ENST00000327532|DZIP1L', 'nc|ENSG00000158163|Q8IYY4-2|DZIP1L'] 105241 8134 STSESKPPP True H1975_Epitope_Rep2 928.4501760134399 928.44906993586 36.237 2 -0.7070857985687857 0.21243695951778763 1.0 ['nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7', 'nc|ENSG00000166689|Q6IQ23-3|PLEKHA7', 'ENST00000525781.5_1_11:16810636-16838952:-|nuORF', 'nc|ENSG00000166689|Q6IQ23-2|PLEKHA7'] 18034 6745 EIIIYCTGAFL True NCI_RA007_Epitope_Rep2 1241.6365968841299 1241.63548993586 30.85 2 -0.7071110838869441 0.21243695951778763 1.0 ['nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'BAG4-FGFR1|1|fusion', 'BAG4-FGFR1|2|fusion', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-3|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-8|FGFR1', 'nc|ENSG00000077782|P11362-9|FGFR1', 'nc|ENSG00000077782|P11362-10|FGFR1', 'nc|ENSG00000077782|P11362-11|FGFR1', 'nc|ENSG00000077782|P11362-12|FGFR1', 'nc|ENSG00000077782|P11362-13|FGFR1', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion'] 135442 6086 YDYFQIKMQNY True H1975_Epitope_Rep2 1511.67550157399 1511.67440993586 28.385 2 -0.7071410452548601 0.21243695951778763 1.0 ['ENSG00000205413|ENST00000379958|SAMD9'] 88436 8089 QYSVYGGD True NCI_RA007_Epitope_Rep4 887.3661120363099 887.36556496793 37.901 1 -0.7072719791894997 0.21249432076328942 1.0 ['SLITRK5|p.G720D|1|0.51|ENSG00000165300|chr13:87677547-87677547|G/A|missense_variant'] 54028 12852 KYLQPKVNP True PC9_epitope_Rep3 1085.62332977849 1085.62222993586 54.454 2 -0.7072926095487743 0.21252139146764398 1.0 ['ENST00000456324.5_1_19:36727248-36727317:+|nuORF'] 128115 18372 VRRRRGRH True NCI_RA007_Epitope_Rep5 1091.6649092937098 1091.6638099358602 77.478 2 -0.7073193801755557 0.21254202380591816 1.0 ['ENST00000370282.7_1_1:93645835-93645964:-|nuORF'] 18161 10372 EIPDGQITVG True H1975_Epitope_Rep3 1027.51858992643 1027.51748993586 44.95 2 -0.7073288607375695 0.21254202380591816 1.0 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF'] 112471 13060 TNQNLQYFLDR True NCI_RA007_Epitope_Rep2 1410.68917749218 1410.68808993586 55.429 2 -0.7073645899529143 0.21254202380591816 1.0 ['ENSG00000004799|ENST00000005178|PDK4'] 81086 10892 PPFTDCGSIFI True H1975_Epitope_Rep1 1195.5583465634297 1195.55671490379 46.858 3 -0.7073780140858358 0.21254751124369672 1.0 ['ENST00000466767.1_1_1:160518048-160520985:-|nuORF'] 46103 8260 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 38.451 2 -0.7073827925564992 0.21254751124369672 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 105858 10826 SVKEVLQKHF True PC9_epitope_Rep1 1213.68190728377 1213.68025490379 46.528 3 -0.7073859682162308 0.21254751124369672 1.0 ['CON__Q2YDI2'] 90571 25350 RKGKKKKRWH True PC9_epitope_Rep5 1350.8472903297798 1350.8461899358601 102.72 2 -0.7074619833373705 0.2125832828588734 1.0 ['ENSG00000160818|ENST00000368232|GPATCH4', 'nc|ENSG00000160818|Q5T3I0-3|GPATCH4'] 11511 19922 DGGWCWGC True H1975_Epitope_Rep2 882.2788943383799 882.27778993586 82.614 2 -0.7074697387504003 0.2125832828588734 1.0 ['ENST00000593460.1_1_19:18120319-18120565:+|nuORF'] 70903 3853 MEKHSMLMDWK True NCI_RA007_Epitope_Rep2 1434.64579875218 1434.64414490379 19.622 3 -0.7074818789073749 0.2125832828588734 1.0 ['nc|ENSG00000172954|Q6UWP7-2|LCLAT1'] 119958 12319 VEYQNKKFHNR True H1975_Epitope_Rep3 1461.7476954278097 1461.7465899358601 52.568 2 -0.7075352448968653 0.2126406323344589 1.0 ['ENST00000492424.1_1_20:17487687-17492707:-|nuORF'] 112086 5401 TLTNELKA True H1975_Epitope_Rep2 888.4916469025999 888.49054993586 25.807 2 -0.7076200051265856 0.21266769631446655 1.0 ['SPATA4|p.M203T|1|0.23|ENSG00000150628|chr4:176192707-176192707|A/G|missense_variant'] 41309 5056 IAICLHWAPK True NCI_RA007_Epitope_Rep5 1150.63212064038 1150.63048490379 26.147 3 -0.7077100785693863 0.21269475947488758 1.0 ['KIAA1217|p.A407Pfs*73|1|0.23|ENSG00000120549|chr10:24473599-24473605|AGCCTCA/-|frameshift_variant'] 124881 5866 VLLNEDGK True NCI_RA007_Epitope_Rep2 886.47599683846 886.47488993586 27.436 2 -0.7077676193370654 0.2127218218157592 1.0 ['ENSG00000164961|ENST00000318410|WASHC5', 'WASHC5|p.Y1056Tfs*28|1|0.3|ENSG00000164961|chr8:125037249-125037252|TGTA/-|frameshift_variant'] 26514 14943 FITHLFKCK True PC9_epitope_Rep5 1135.6212216035099 1135.61956490379 62.482 3 -0.707824887021713 0.2127424409889927 1.0 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 80338 22620 PLGAKEFGL True PC9_epitope_Rep1 930.5174677276199 930.51636993586 91.817 2 -0.7078603789416988 0.2127424409889927 1.0 ['ENST00000455680.5_1_1:91297146-91297428:-|nuORF'] 58422 4107 LEVTYRERL True NCI_RA007_Epitope_Rep5 1177.6455217750497 1177.64386490379 22.28 3 -0.7078754858176786 0.2127424409889927 1.0 ['ENSG00000116459|ENST00000369722|ATP5PB', 'ENST00000567372.1_1_18:65945123-65945423:-|nuORF'] 20149 6876 ENLVKNLNSEN True PC9_epitope_Rep3 1272.6309939097198 1272.62988993586 31.464 2 -0.7079018503057097 0.21276305828917486 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 80444 19763 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 82.757 3 -0.7079054223383138 0.21276305828917486 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 106059 9509 SVLSVGSTGL True PC9_epitope_Rep2 918.5022115863 918.50110993586 41.925 2 -0.7079274916801085 0.21276305828917486 1.0 ['ENSG00000100926|ENST00000261789|TM9SF1'] 93138 10855 RRRRKGTNIS True NCI_RA007_Epitope_Rep3 1242.7381338036198 1242.73648490379 49.755 3 -0.707962283536457 0.2127717555865076 1.0 ['ENSG00000104549|ENST00000265896|SQLE'] 123383 9581 VIDAKFETKAR True H1975_Epitope_Rep3 1276.71393568804 1276.71282993586 41.864 2 -0.7079713353183572 0.2127717555865076 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX', 'ATRX|p.C1026Vfs*7|1|0.1|ENSG00000085224|chrX:77682180-77682180|A/-|frameshift_variant', 'nc|ENSG00000085224|P46100-6|ATRX'] 24986 12923 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 56.799 2 -0.7080194637895525 0.2127804523571623 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 31446 8750 GEDVAVKIFSS True H1975_Epitope_Rep1 1150.58700383942 1150.5859099358602 38.587 2 -0.7080362173337031 0.2127804523571623 1.0 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C'] 127416 11862 VQRITTELKR True NCI_RA007_Epitope_Rep2 1242.7408191422198 1242.73918490379 50.743 3 -0.7080660047400709 0.21278914860118686 1.0 ['ONECUT1|p.A298V|1|0.14|ENSG00000169856|chr15:52788992-52788992|G/A|missense_variant'] 16318 12575 EEIVPMGISP True PC9_epitope_Rep1 1070.53179746242 1070.5307099358602 53.238 2 -0.7080846418009958 0.21278914860118686 1.0 ['ENST00000375163.5_1_9:100372568-100388015:-|nuORF', 'ENSG00000136925|ENST00000341170|TSTD2'] 119996 15982 VFATDDGF True PC9_epitope_Rep1 870.3759484440199 870.37484993586 66.284 2 -0.7081489559213392 0.21280009687868973 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 52611 8080 KQDADRPLSK True NCI_RA007_Epitope_Rep2 1156.6200353031998 1156.61892993586 36.062 2 -0.7081757644315793 0.21280009687868973 1.0 ['CEP170|p.E755Rfs*62|2|0.13|ENSG00000143702|chr1:243165697-243165697|C/-|frameshift_variant', 'ENST00000502249.6_1_4:119401524-119435218:+|nuORF', 'ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-3|CEP170', 'nc|ENSG00000143702|Q5SW79-2|CEP170'] 128774 14834 VSQSSVYI True PC9_epitope_Rep6 881.4494477374499 881.4488949679301 69.033 1 -0.7081965651064959 0.21280009687868973 1.0 ['STAB2|p.T1696S|1|0.29|ENSG00000136011|chr12:103730119-103730119|A/T|missense_variant'] 13238 11963 DLVDRTRSWLY True H1975_Epitope_Rep2 1422.7255630009 1422.72446993586 51.094 2 -0.7082007347836226 0.21280009687868973 1.0 ['ENST00000504260.5_1_17:47783523-47784713:-|nuORF', 'ENST00000508607.1_1_17:47783523-47785148:-|nuORF'] 18731 15633 ELDLEKLREES True NCI_RA007_Epitope_Rep1 1359.68817443267 1359.68706993586 64.9 2 -0.708206768686398 0.21280009687868973 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17'] 78523 8994 PDLAKILEE True NCI_RA007_Epitope_Rep5 1026.5597264624198 1026.5586299358602 41.253 2 -0.7082069399343461 0.21280009687868973 1.0 ['ENSG00000166664|ENST00000299847|CHRFAM7A', 'ENSG00000175344|ENST00000306901|CHRNA7', 'nc|ENSG00000175344|P36544-2|CHRNA7'] 90942 23541 RLFRMLRIF True PC9_epitope_Rep1 1250.7434024248598 1250.74174490379 95.342 3 -0.7082698097598498 0.21283584348747445 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.N747Kfs*10|1|0.23|ENSG00000136546|chr2:166432669-166432670|-/T|frameshift_variant'] 81653 27159 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 113.89 3 -0.7083088191768394 0.21283584348747445 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 80172 22712 PKYCLTPEYP True PC9_epitope_Rep3 1209.5739966275698 1209.57288993586 92.63 2 -0.7083121635851681 0.21283584348747445 1.0 ['ENSG00000130176|ENST00000252456|CNN1', 'nc|ENSG00000130176|P51911-2|CNN1', 'FZR1-CNN1|1|fusion'] 73139 7686 NECSSYKNP True H1975_Epitope_Rep2 1040.4233096425999 1040.42220993586 34.516 2 -0.7084756343441316 0.212893167438622 1.0 ['FBN2|p.S2702Y|1|0.6|ENSG00000138829|chr5:128263512-128263512|G/T|missense_variant'] 60275 12131 LIEKVSLIIF True NCI_RA007_Epitope_Rep5 1173.7372969015698 1173.73564490379 53.317 3 -0.7085225891390063 0.21290508120544296 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 124193 8573 VLAGEARRAGP True NCI_RA007_Epitope_Rep2 1095.6148903531098 1095.61378993586 37.992 2 -0.7085459767187469 0.21293213053217896 1.0 ['ENST00000441800.5_1_2:190539201-190539381:+|nuORF'] 125463 12425 VLTWPVWI True PC9_epitope_Rep4 1012.5745886809199 1012.57348993586 55.597 2 -0.7085962292249316 0.2129343746216249 1.0 ['ENST00000468511.5_1_6:2838142-2838205:-|nuORF'] 140762 7013 YYRARWELYDR True H1975_Epitope_Rep1 1589.7739101756497 1589.77280993586 32.01 2 -0.7086385203840476 0.2129343746216249 1.0 ['ENSG00000181523|ENST00000326317|SGSH'] 55214 24456 LAPRAGVQCFK True NCI_RA007_Epitope_Rep5 1188.6437479532399 1188.64210490379 101.54 3 -0.7086491221408375 0.2129343746216249 1.0 ['ENST00000610036.1_1_2:105953638-105953692:-|nuORF'] 101197 16308 SLVVFLSNRL True PC9_epitope_Rep4 1146.67609362734 1146.6749899358601 70.69 2 -0.7086519758915123 0.2129343746216249 1.0 ['ENST00000397776.2_1_1:158424733-158425060:+|nuORF', 'nc|ENSG00000149547|O14681-3|EI24', 'ENSG00000149547|ENST00000278903|EI24'] 104112 1456 SRWTRAARPCS True NCI_RA007_Epitope_Rep5 1289.6411221842898 1289.63947490379 8.2981 3 -0.7086744712683837 0.21294628668291132 1.0 ['ENST00000480818.3_1_9:139838480-139838585:-|nuORF'] 107826 12490 TAQSVQNPE True NCI_RA007_Epitope_Rep2 972.4512386426 972.4506949679301 53.195 1 -0.7087195393104964 0.21297333292974543 1.0 ['ABCC10|p.D1264Efs*2|1|0.28|ENSG00000124574|chr6:43447766-43447769|TGGA/-|frameshift_variant', 'nc|ENSG00000124574|Q5T3U5-2|ABCC10', 'ENSG00000124574|ENST00000372530|ABCC10'] 81654 27223 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 114.23 3 -0.7087423195431682 0.21298524404086266 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 72578 15808 MVPHAAEP True PC9_epitope_Rep3 850.4007237232199 850.39962993586 65.96 2 -0.7087538020816601 0.21299715479145226 1.0 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4'] 101007 13686 SLTEYLQNV True PC9_epitope_Rep3 1065.5342399905699 1065.5331499358601 57.716 2 -0.7087711751969563 0.21302419904051334 1.0 ['ENSG00000170759|ENST00000302418|KIF5B'] 19193 12204 ELKLEALTQR True PC9_epitope_Rep1 1199.68738658703 1199.68628993586 51.801 2 -0.7088239668487677 0.2130361088410666 1.0 ['ENSG00000144791|ENST00000273317|LIMD1'] 39460 11459 HNIKLFVL True NCI_RA007_Epitope_Rep5 982.59638675466 982.59528993586 50.725 2 -0.7088464062729593 0.21304801828114833 1.0 ['nc|ENSG00000137491|O94956-3|SLCO2B1', 'ENSG00000137491|ENST00000289575|SLCO2B1'] 80447 20024 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 83.809 3 -0.7089107826511561 0.2130599273607748 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 116093 10669 TVSGSKQP True PC9_epitope_Rep2 802.4184819623399 802.41738993586 46.351 2 -0.7089135093327742 0.21307183607996247 1.0 ['ENST00000209875.8_1_12:54625656-54625950:-|nuORF'] 78650 3891 PDYKQWKIE True H1975_Epitope_Rep3 1205.6080736371698 1205.60641490379 20.088 3 -0.7089526728090402 0.21308374443872763 1.0 ['ENST00000439282.1_1_1:109529720-109529831:-|nuORF'] 65599 8204 LSGLEAPSLQK True H1975_Epitope_Rep1 1141.63428838501 1141.6331899358602 36.499 2 -0.709028523616688 0.21311078492199204 1.0 ['ENSG00000260734|ENST00000561754|TLE7'] 56523 11478 LDTYNCDLHF True NCI_RA007_Epitope_Rep4 1239.52302368387 1239.52192993586 51.083 2 -0.709058195958506 0.2131345993795869 1.0 ['nc|ENSG00000153187|Q00839-2|HNRNPU', 'ENSG00000153187|ENST00000640218|HNRNPU'] 56719 13061 LEAGKWKSI True PC9_epitope_Rep2 1030.5811306133398 1030.58002993586 55.517 2 -0.7090867749758855 0.2131345993795869 1.0 ['nc|ENSG00000173077|Q9P2X7|DELEC1'] 100268 6431 SLLRKHQERVQ True NCI_RA007_Epitope_Rep5 1392.7949799734001 1392.79333490379 31.405 3 -0.7091489464450398 0.2132005810434572 1.0 ['nc|ENSG00000289701|Q9H257-2|CARD9', 'ENSG00000187796|ENST00000371732|CARD9', 'ENST00000556340.1_1_9:139265151-139266545:-|nuORF', 'nc|ENSG00000289701|Q9H257-3|CARD9'] 73691 24088 NGRIKQLRSET True PC9_epitope_Rep3 1300.7211463268 1300.72004993586 97.939 2 -0.7091521098476127 0.2132005810434572 1.0 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS'] 37195 19248 GVVARLLAL True PC9_epitope_Rep4 910.5963867546599 910.59528993586 82.14 2 -0.7091615624061262 0.2132005810434572 1.0 ['nc|ENSG00000108828|Q99536-2|VAT1', 'nc|ENSG00000108828|Q99536-3|VAT1', 'ENSG00000108828|ENST00000355653|VAT1'] 81655 27285 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 114.57 3 -0.7091758199094971 0.21320926009986382 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 65949 13923 LSLMDVMLV True PC9_epitope_Rep6 1019.5395256951499 1019.53842993586 65.396 2 -0.7091798516118336 0.21320926009986382 1.0 ['ENSG00000177462|ENST00000641945|OR2T8'] 19646 11608 ELRSGGAEVL True PC9_epitope_Rep2 1029.5454733806098 1029.54436993586 49.977 2 -0.7092566951939616 0.21323629541087288 1.0 ['CARMIL1|p.Q472E|1|0.29|ENSG00000079691|chr6:25509674-25509674|C/G|missense_variant'] 121301 4604 VGHLRVRRFWS True H1975_Epitope_Rep1 1411.79492040375 1411.79326490379 22.735 3 -0.709296243416683 0.2132481994795134 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 102439 23907 SPWKARRV True NCI_RA007_Epitope_Rep4 998.5773826455799 998.57628993586 103.69 2 -0.7093442801831146 0.2132504236262406 1.0 ['ENST00000373137.2_1_1:36793434-36793755:+|nuORF'] 24988 13105 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 57.509 2 -0.7093453358712251 0.2132504236262406 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18914 10375 ELERESEFWNK True H1975_Epitope_Rep1 1465.6837577585695 1465.68266993586 44.857 2 -0.709387495294517 0.2132504236262406 1.0 ['PCGF5|p.K99N|2|0.35|ENSG00000180628|chr10:91248696-91248696|G/C|missense_variant'] 126072 9329 VPCKTLGP True PC9_epitope_Rep5 813.4418602592099 813.44076993586 40.837 2 -0.7093917055380188 0.2132504236262406 1.0 ['ENST00000392144.5_1_19:38145708-38146127:-|nuORF'] 58893 19489 LFTMHSNGI True PC9_epitope_Rep1 1018.4906013567801 1018.48950993586 79.782 2 -0.7094618947622737 0.21329258514002147 1.0 ['ENST00000558906.5_1_15:50152393-50311102:-|nuORF', 'ENST00000559726.5_1_15:50152393-50311102:-|nuORF', 'ENSG00000104043|ENST00000284509|ATP8B4', 'ATP8B4|p.I1035T|2|0.36|ENSG00000104043|chr15:49866408-49866408|A/G|missense_variant'] 61561 15470 LLGLKKLSFYY True NCI_RA007_Epitope_Rep3 1343.78530972315 1343.7842099358602 68.408 2 -0.7094924885713256 0.21333151787470309 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 56606 9452 LDYEIRYYEKE True PC9_epitope_Rep1 1519.7194745609497 1519.71781490379 41.213 3 -0.7094934591899931 0.21333151787470309 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'nc|ENSG00000154928|P54762-5|EPHB1'] 123219 16211 VHLHWWLWWL True NCI_RA007_Epitope_Rep2 1474.7662460444199 1474.76514993586 67.786 2 -0.7096232762075011 0.21339747662703096 1.0 ['ENST00000361229.8_1_X:101976007-102003782:+|nuORF', 'ENST00000448867.1_1_X:102001081-102003782:+|nuORF'] 128561 9669 VSIGPGLPK True PC9_epitope_Rep2 866.52255310806 866.52144993586 42.529 2 -0.709671030730436 0.21339747662703096 1.0 ['ENSG00000157483|ENST00000288235|MYO1E'] 110330 12947 TIIYNGTLV True PC9_epitope_Rep5 992.5542471591599 992.55314993586 54.811 2 -0.7096719563351552 0.21339747662703096 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 59530 20708 LGQEQPQAV True PC9_epitope_Rep1 968.4927095317598 968.49160993586 84.479 2 -0.7097222642595363 0.2134115903005733 1.0 ['nc|ENSG00000180316|Q8N8W4-2|PNPLA1', 'nc|ENSG00000180316|Q8N8W4-3|PNPLA1', 'KCTD20-PNPLA1|1|fusion', 'nc|ENSG00000180316|Q8N8W4|PNPLA1', 'ENSG00000180316|ENST00000636260|PNPLA1'] 66436 12990 LSRNVLRL True PC9_epitope_Rep5 969.6083484206899 969.60724993586 54.975 2 -0.7097353501495076 0.2134115903005733 1.0 ['ENST00000492204.1_1_10:103552448-103553834:-|nuORF'] 34755 22294 GQRLPVEDFSL True PC9_epitope_Rep2 1259.6510010783097 1259.64990993586 91.231 2 -0.7097510722243515 0.2134115903005733 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 26611 9002 FKKRRRRARKY True H1975_Epitope_Rep1 1563.9698650739497 1563.9682049037901 39.532 3 -0.7097630532984042 0.2134115903005733 1.0 ['SYNPO2|p.I1101Ffs*22|2|0.25|ENSG00000172403|chr4:119057443-119057443|C/-|frameshift_variant', 'nc|ENSG00000172403|Q9UMS6-4|SYNPO2', 'ENSG00000172403|ENST00000307142|SYNPO2', 'MSI2-SYNPO2|1|fusion', 'MSI2-SYNPO2|4|fusion', 'nc|ENSG00000172403|Q9UMS6|SYNPO2', 'nc|ENSG00000172403|Q9UMS6-3|SYNPO2', 'MSI2-SYNPO2|2|fusion', 'MSI2-SYNPO2|5|fusion', 'MSI2-SYNPO2|3|fusion', 'MSI2-SYNPO2|6|fusion', 'nc|ENSG00000172403|Q9UMS6-5|SYNPO2'] 85738 7995 QLTVQVAYYTM True H1975_Epitope_Rep1 1315.6482241969898 1315.6471299358602 35.702 2 -0.709775134715787 0.2134115903005733 1.0 ['ENSG00000162814|ENST00000366933|SPATA17'] 23699 16077 EYIEATGL True PC9_epitope_Rep3 894.4334633201399 894.4329149679301 66.99 1 -0.7098668637795194 0.21343861559871724 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ENST00000595822.1_1_19:47440583-47491508:+|nuORF'] 10209 3326 CDSATSCTAD True NCI_RA007_Epitope_Rep1 972.31646161556 972.3159149679301 16.833 1 -0.7099398603662438 0.21345595353339786 1.0 ['chr11:118117454-118125300|279|11.37|0.64|4.16|+|0|TE_info:LTR16D,LTR16D_dup814,ERVL,LTR,acceptor,+,118125300,118125550|TMPRSS4,None|2'] 64826 11038 LSAFSAQGL True PC9_epitope_Rep2 892.4654321547598 892.46432993586 47.777 2 -0.7099417744608915 0.21345595353339786 1.0 ['ENSG00000168014|ENST00000334126|C2CD3', 'nc|ENSG00000168014|Q4AC94-2|C2CD3', 'nc|ENSG00000168014|Q4AC94-4|C2CD3', 'nc|ENSG00000168014|Q4AC94-1|C2CD3', 'nc|ENSG00000168014|Q4AC94-3|C2CD3'] 95737 19466 SCCHPAYC True NCI_RA007_Epitope_Rep4 882.28226546666 882.28116993586 84.144 2 -0.7099714143747662 0.21345595353339786 1.0 ['KRTAP10-8|p.S244Y|1|0.29|ENSG00000187766|chr21:44612831-44612831|C/A|missense_variant'] 15653 10520 ECDDCDSC True NCI_RA007_Epitope_Rep4 888.1935696015601 888.19246993586 47.312 2 -0.7099781044930077 0.21345595353339786 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 117564 8560 VAGGGGGFGAA True PC9_epitope_Rep3 819.38751618723 819.38640993586 37.879 2 -0.7099911938273078 0.21346785049838912 1.0 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 114874 6623 TTDRLWRKS True NCI_RA007_Epitope_Rep2 1161.62545503681 1161.6243499358602 30.373 2 -0.7100366833057736 0.21347328937019783 1.0 ['ENSG00000144410|ENST00000272852|CPO'] 81656 27409 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 115.25 3 -0.7100428206421547 0.21347328937019783 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 79201 25110 PGFIPNKG True PC9_epitope_Rep3 828.4493881678 828.44828993586 101.93 2 -0.7100794536365803 0.21347328937019783 1.0 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A'] 109692 7816 THEQVFLQP True NCI_RA007_Epitope_Rep5 1097.5505587610498 1097.54946993586 36.765 2 -0.7100821648183819 0.21348518535323743 1.0 ['ENSG00000158106|ENST00000289013|RHPN1', 'ENST00000522335.5_1_8:144462155-144464818:+|nuORF', 'ENST00000522899.1_1_8:144461534-144462449:+|nuORF'] 55874 15527 LDFSGIEPDIK True H1975_Epitope_Rep1 1232.6288686513997 1232.6277699358602 64.999 2 -0.7101532078192445 0.21351220545086058 1.0 ['ENSG00000147251|ENST00000276202|DOCK11', 'ENST00000553480.1_1_14:45334525-45334813:-|nuORF'] 20126 15971 ENLEYCIMV True H1975_Epitope_Rep3 1112.48821839828 1112.4871299358601 66.889 2 -0.7102053524138194 0.21351764189894284 1.0 ['ENST00000495014.5_1_10:135207724-135213140:+|nuORF', 'ENST00000473735.1_1_10:135208280-135215808:+|nuORF', 'nc|ENSG00000148824|Q9BT17-2|MTG1', 'ENST00000460848.5_1_10:135207724-135215322:+|nuORF', 'ENSG00000148824|ENST00000317502|MTG1'] 78610 14770 PDSFNIPGSS True PC9_epitope_Rep6 1019.45598966987 1019.4554749679301 68.769 1 -0.7102120635621542 0.21351764189894284 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 20881 5197 EQSEAELE True H1975_Epitope_Rep3 933.3927207069698 933.39162993586 25.08 2 -0.7102123335150334 0.21351764189894284 1.0 ['nc|ENSG00000012822|Q9P1Z2-4|CALCOCO1'] 107734 3985 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 20.397 2 -0.7102246034101876 0.21352953631166632 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 111407 7527 TLKGKTNGADP True NCI_RA007_Epitope_Rep2 1100.5825871653199 1100.5814899358602 33.904 2 -0.7102807284995158 0.21355655369538587 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP'] 58677 23095 LFIATSQKFV True PC9_epitope_Rep5 1152.6542955536002 1152.6531899358602 93.821 2 -0.7102973461087544 0.21356521739130435 1.0 ['nc|ENSG00000025770|Q6IBW4-2|NCAPH2', 'ENSG00000025770|ENST00000420993|NCAPH2', 'nc|ENSG00000025770|Q6IBW4-4|NCAPH2'] 43706 13716 IIQQEYLDTYY True NCI_RA007_Epitope_Rep1 1447.6871118035099 1447.68600993586 57.368 2 -0.7103125292795365 0.21356521739130435 1.0 ['ENSG00000162630|ENST00000367434|B3GALT2'] 21922 13351 ESGSYMCIYV True H1975_Epitope_Rep1 1150.4674829537 1150.46697496793 56.463 1 -0.710358023749949 0.21359223300970873 1.0 ['SLCO1B1|p.W171C|2|0.09|ENSG00000134538|chr12:21178607-21178607|G/C|missense_variant'] 13087 13913 DLSAIIPSQLR True NCI_RA007_Epitope_Rep2 1211.68738658703 1211.68628993586 58.772 2 -0.7104392342504533 0.21362790908678492 1.0 ['FIGN|p.M717I|1|0.39|ENSG00000182263|chr2:163609681-163609681|C/T|missense_variant'] 110163 7399 TIDEEAEMEEQ True H1975_Epitope_Rep1 1322.5183917959 1322.5172899358602 33.465 2 -0.7104631849166114 0.21362790908678492 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant'] 121531 13497 VGKLHDAKVI True PC9_epitope_Rep3 1078.6498788795 1078.6487899358601 56.968 2 -0.7104836223273442 0.21362790908678492 1.0 ['chr19:32731883-32738856|120|32.03|0.86|5.23|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32802789-32802922|119|10.48|0.41|4.67|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32821139-32826098|136|11.88|0.47|4.66|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32818157-32821033|134|11.27|0.53|4.41|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32815620-32818089|138|12.78|0.49|4.72|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32813776-32815448|146|12.14|0.53|4.52|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32811420-32813684|125|10.81|0.45|4.6|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32807648-32810093|113|10.89|0.34|5.02|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32810277-32811210|133|13.62|0.46|4.89|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32801873-32802656|116|12.07|0.36|5.06|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32800772-32801756|114|12.14|0.37|5.04|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32800358-32800644|102|10.03|0.33|4.91|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32749869-32755992|129|29.96|0.99|4.92|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32748531-32749784|139|36.43|0.97|5.23|+|ENST00000647536|TDRD12,TDRD12', 'ENSG00000173809|ENST00000639142|TDRD12', 'nc|ENSG00000173809|Q587J7|TDRD12', 'chr19:32803142-32807549|109|11.56|0.36|4.99|+|ENST00000444215|TDRD12,TDRD12'] 37147 14963 GVTFLLLP True H1975_Epitope_Rep2 858.5214904788999 858.52038993586 62.706 2 -0.7105230267499916 0.21365492212309087 1.0 ['ENSG00000188124|ENST00000641124|OR2AG2'] 56777 20667 LEASEFLAE True PC9_epitope_Rep4 1007.48114178855 1007.48004993586 87.654 2 -0.7105949438589506 0.21366681284117886 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 120066 7665 VFFRTNDAK True H1975_Epitope_Rep1 1096.5665431783598 1096.5654499358602 34.455 2 -0.7106219881815484 0.2136722412072459 1.0 ['nc|ENSG00000184752|Q9UI09-2|NDUFA12', 'ENSG00000184752|ENST00000327772|NDUFA12'] 97274 7307 SFQDYTGQK True NCI_RA007_Epitope_Rep2 1072.48253877088 1072.4814499358602 33.043 2 -0.7106563815669337 0.2136722412072459 1.0 ['nc|ENSG00000121766|Q9NP64-2|ZCCHC17', 'nc|ENSG00000121766|Q9NP64-3|ZCCHC17', 'ENSG00000121766|ENST00000344147|ZCCHC17'] 99352 18222 SLDRYWSV True PC9_epitope_Rep5 1024.4977949121999 1024.49668993586 75.103 2 -0.7106657010534896 0.2136722412072459 1.0 ['ENSG00000184160|ENST00000330055|ADRA2C'] 17828 9851 EIAFPDRR True H1975_Epitope_Rep1 1002.5246783663799 1002.52358993586 42.824 2 -0.710709492602082 0.21369175410480482 1.0 ['ENST00000570308.5_1_16:55539636-55539948:+|nuORF'] 22200 5685 ETDELWASL True NCI_RA007_Epitope_Rep4 1062.48695544498 1062.4858499358602 28.476 2 -0.7107794583559756 0.21369175410480482 1.0 ['nc|ENSG00000133316|Q6RFH5-2|WDR74', 'ENSG00000133316|ENST00000278856|WDR74'] 58370 22244 LEVIWIVF True PC9_epitope_Rep4 1017.5899043918898 1017.58880993586 93.799 2 -0.7108369793488086 0.21369175410480482 1.0 ['ENST00000313117.10_2_2:38970876-38971032:-|nuORF'] 112101 13871 TLTQNQAFSL True PC9_epitope_Rep4 1121.5716881284498 1121.5705899358602 61.256 2 -0.7108372392566119 0.21369175410480482 1.0 ['nc|ENSG00000150627|Q8IZU2|WDR17', 'ENSG00000150627|ENST00000508596|WDR17'] 20711 16410 EQIVTVNDHKR True H1975_Epitope_Rep3 1337.7051619094898 1337.7040699358602 68.598 2 -0.7108451965579065 0.21369175410480482 1.0 ['nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'nc|ENSG00000166912|Q9NXD2-3|MTMR10'] 93221 12631 RRRRRRPPPRR True NCI_RA007_Epitope_Rep2 1557.9777444190497 1557.97609490379 53.745 3 -0.7108526899537919 0.21369175410480482 1.0 ['ENST00000533683.6_2_19:14201006-14201489:-|nuORF'] 110292 11877 TIGSPPLKELK True H1975_Epitope_Rep1 1181.70197402201 1181.70086993586 50.683 2 -0.7108871020224519 0.21369175410480482 1.0 ['ENST00000254323.6_1_19:13942265-13942868:+|nuORF'] 57629 10023 LELRLQGHEK True H1975_Epitope_Rep1 1221.68296991293 1221.68186993586 43.491 2 -0.7108909949133869 0.21369175410480482 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 45814 13355 ISPHLTFSEGL True PC9_epitope_Rep1 1199.61863832087 1199.61700490379 56.23 3 -0.7109115417579125 0.2137187608666072 1.0 ['ENSG00000116678|ENST00000349533|LEPR'] 48283 14605 KDLEIEQWHKK True H1975_Epitope_Rep3 1452.77251319332 1452.7714099358602 61.547 2 -0.7109561191889064 0.21374472781145595 1.0 ['nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENSG00000101745|ENST00000262126|ANKRD12'] 124542 8261 VLGFGTKYLKE True PC9_epitope_Rep4 1253.70197402201 1253.70031490379 39.237 3 -0.71097739780974 0.21374472781145595 1.0 ['ENST00000266434.8_1_12:12247552-12251919:+|nuORF', 'ENSG00000121380|ENST00000308721|BCL2L14'] 126331 25458 VPKKLLMMAG True PC9_epitope_Rep3 1086.6293437590598 1086.6282499358601 103.37 2 -0.7109821389299994 0.21374472781145595 1.0 ['ENST00000397318.4_1_X:40794237-40794825:-|nuORF', 'ENST00000533872.5_1_16:2012101-2013018:-|nuORF', 'ENST00000532746.5_2_16:2012101-2013785:-|nuORF', 'ENSG00000140988|ENST00000343262|RPS2', 'ENST00000443417.1_1_9:102879039-102879699:-|nuORF', 'ENST00000434010.1_1_20:32710701-32710965:+|nuORF', 'ENST00000438210.1_1_1:40428398-40429073:+|nuORF', 'ENST00000479476.1_1_18:68097766-68098228:+|nuORF'] 35892 16994 GVAGGFIY True NCI_RA007_Epitope_Rep4 782.3962899657799 782.39574496793 73.646 1 -0.7109991998287208 0.21374472781145595 1.0 ['ENST00000462374.1_1_1:235618964-235634205:-|nuORF', 'nc|ENSG00000162885|Q8NCR0-2|B3GALNT2', 'ENSG00000162885|ENST00000366600|B3GALNT2'] 6782 4824 AQFAHSYEFY True H1975_Epitope_Rep2 1261.54038800017 1261.53874490379 23.646 3 -0.7110309038260842 0.21374472781145595 1.0 17926 10376 EIEDIFHK True NCI_RA007_Epitope_Rep2 1029.51311062317 1029.51200993586 44.951 2 -0.7110314508297779 0.21374472781145595 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'nc|ENSG00000183914|Q9P225-3|DNAH2'] 119620 8649 VESALHKYTLY True H1975_Epitope_Rep3 1322.68705223386 1322.6859499358602 38.264 2 -0.7110570322158342 0.21376849934241357 1.0 ['ENST00000546954.1_1_12:120882345-120882465:-|nuORF'] 19885 9622 ELVWTEEGP True PC9_epitope_Rep1 1058.49204082542 1058.49094993586 41.866 2 -0.7110712445606255 0.21376849934241357 1.0 ['ENST00000373950.6_1_20:34700355-34709591:+|nuORF'] 71543 14405 MLAVAALY True H1975_Epitope_Rep2 850.4622613506201 850.46116993586 60.558 2 -0.7111305934048775 0.2137771529635844 1.0 ['ENSG00000128310|ENST00000249041|GALR3'] 93223 15250 RRRRRRPPPRR True NCI_RA007_Epitope_Rep4 1557.9777444190497 1557.97609490379 66.295 3 -0.7111351938325835 0.2137771529635844 1.0 ['ENST00000533683.6_2_19:14201006-14201489:-|nuORF'] 118272 7018 VCRMETEYGP True NCI_RA007_Epitope_Rep3 1183.50018006431 1183.4990899358602 34.721 2 -0.7111816310723008 0.2138009220769405 1.0 ['ENSG00000101825|ENST00000217939|MXRA5'] 56234 14298 LDPTFEPIP True H1975_Epitope_Rep3 1027.5226126777097 1027.5215099358602 60.34 2 -0.7111840205988122 0.2138009220769405 1.0 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 9651 14363 AYGLVSATF True NCI_RA007_Epitope_Rep3 927.47018318203 927.46963496793 63.808 1 -0.7112364094932422 0.21380957419471863 1.0 ['ENSG00000156875|ENST00000370152|MFSD14A'] 105117 11017 STLPKSLSL True PC9_epitope_Rep1 944.55424715916 944.55314993586 47.264 2 -0.7112691559132668 0.21380957419471863 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 66876 19249 LSWKQQVL True PC9_epitope_Rep1 1000.5705659296399 1000.56946993586 78.841 2 -0.7113669531819748 0.2138452237001209 1.0 ['ENSG00000179134|ENST00000610417|SAMD4B', 'ENST00000595476.1_1_19:39869154-39871842:+|nuORF'] 121304 5135 VGHLRVRRFWS True PC9_epitope_Rep2 1411.79492040375 1411.79326490379 25.129 3 -0.7113778616585489 0.2138452237001209 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 8476 7494 ATTQANGGWP True PC9_epitope_Rep1 1001.4566583762098 1001.45556993586 33.645 2 -0.7113966127391792 0.2138452237001209 1.0 ['ENSG00000091664|ENST00000263160|SLC17A6'] 122137 17118 VGRHQRGR True NCI_RA007_Epitope_Rep4 964.5427284723598 964.54217496793 74.162 1 -0.7114436729075688 0.21385710615014888 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 12667 7217 DLEQFRQPTL True NCI_RA007_Epitope_Rep4 1245.6353510141698 1245.63424993586 34.393 2 -0.7114555296828016 0.21386575578495534 1.0 ['nc|ENSG00000152214|Q99578-2|RIT2'] 115909 19640 TVPISTGLP True PC9_epitope_Rep1 883.5014833103099 883.5009349679301 80.37 1 -0.7114835213893077 0.21386575578495534 1.0 ['ENST00000252445.7_1_19:11663878-11664130:-|nuORF'] 125364 12478 VLSRRKRHD True NCI_RA007_Epitope_Rep2 1165.67922194517 1165.6781299358602 53.147 2 -0.7114986210865384 0.21389275134514238 1.0 ['ENST00000520448.5_1_8:24181385-24209525:+|nuORF', 'nc|ENSG00000042980|Q9UKQ2-2|ADAM28', 'ADAM28|p.Q725Rfs*11|1|0.21|ENSG00000042980|chr8:24351302-24351303|CC/-|frameshift_variant', 'ENSG00000042980|ENST00000265769|ADAM28'] 58789 7805 LFPGAPKG True PC9_epitope_Rep1 785.44357451137 785.44246993586 34.846 2 -0.7115500156804977 0.2139046323584977 1.0 ['ENSG00000179588|ENST00000319555|ZFPM1'] 69739 5470 LWHFRYESLKH True PC9_epitope_Rep5 1514.7782672801 1514.7766349037902 26.051 3 -0.7116139529449568 0.2139435065818308 1.0 ['ENSG00000105851|ENST00000496166|PIK3CG'] 14129 8616 DSEVSEESPC True NCI_RA007_Epitope_Rep3 1080.3917347308 1080.39062993586 40.967 2 -0.7116347281263051 0.2139435065818308 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 79978 23570 PIVLVSLIL True PC9_epitope_Rep2 965.65250464845 965.65140993586 96.137 2 -0.711731858847891 0.213970499335026 1.0 ['ENST00000532483.5_1_14:73572990-73578268:+|nuORF'] 69294 11954 LVPKHKKKIQP True PC9_epitope_Rep2 1314.84997566838 1314.84832490379 51.303 3 -0.7117602071962543 0.2139791446274747 1.0 ['ENSG00000178804|ENST00000324382|H1-8'] 42015 12118 IEDSNRMTI True PC9_epitope_Rep1 1077.51245900017 1077.51136993586 51.474 2 -0.7117695920503005 0.2139791446274747 1.0 ['ENSG00000180116|ENST00000324616|C12orf40'] 98 11418 AAAQYKFFIV True PC9_epitope_Rep5 1156.62808080576 1156.62643490379 48.919 3 -0.7118477739497688 0.21399102325792266 1.0 ['ENSG00000169413|ENST00000304677|RNASE6'] 107477 6523 TAAEEFAFLMQ True NCI_RA007_Epitope_Rep1 1256.5747249035599 1256.57362993586 29.387 2 -0.7118941904002659 0.21401801366136736 1.0 ['ENSG00000265203|ENST00000584701|RBP3'] 136140 7714 YGGLRGAI True PC9_epitope_Rep3 805.4446371405298 805.44354993586 34.668 2 -0.7118982343352905 0.2140266569951945 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 20447 13231 EPRKRMWKWSR True H1975_Epitope_Rep3 1558.8303199363 1558.8292299358602 56.148 2 -0.7119299520892985 0.2140266569951945 1.0 ['ENST00000448493.7_2_13:99667890-99667971:-|nuORF'] 134964 8314 YAFWGAASF True NCI_RA007_Epitope_Rep4 1018.4548674710599 1018.45376993586 38.794 2 -0.7119395328222297 0.21403853418964866 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 56772 9205 LEARLLPSP True H1975_Epitope_Rep2 994.58113061334 994.58002993586 40.36 2 -0.711953794520627 0.21405041102514508 1.0 ['MAP10|p.R663Kfs*26|1|0.2|ENSG00000212916|chr1:232807011-232807011|G/-|frameshift_variant', 'ENSG00000212916|ENST00000418460|MAP10'] 1669 7916 AEGGVTSEDY True H1975_Epitope_Rep2 1026.41418442754 1026.4130899358602 35.398 2 -0.7119570769941174 0.21405905285744506 1.0 ['nc|ENSG00000066427|P54252-1|ATXN3', 'ENST00000553309.5_1_14:92547307-92572896:-|nuORF', 'nc|ENSG00000066427|P54252-4|ATXN3', 'ENSG00000066427|ENST00000644486|ATXN3', 'ENST00000556644.5_1_14:92537322-92572896:-|nuORF', 'ENST00000507965.5_1_14:92560088-92572896:-|nuORF', 'ENST00000511362.5_1_14:92556902-92572896:-|nuORF', 'ENST00000556339.5_1_14:92537322-92572896:-|nuORF', 'ENST00000454964.3_1_14:92562711-92572896:-|nuORF', 'ENST00000553686.5_1_14:92547307-92572896:-|nuORF'] 59610 8530 LGSFEKDSS True H1975_Epitope_Rep2 968.445090633 968.44398993586 37.765 2 -0.7119602522148509 0.21405905285744506 1.0 ['ENST00000585294.5_2_17:55940614-55940695:-|nuORF'] 24888 2744 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 14.533 2 -0.7120063280957097 0.21408603937805043 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 80199 14864 PLAGFGYG True H1975_Epitope_Rep2 780.3806399016398 780.3800949679301 62.327 1 -0.7120375866616425 0.21412489989574046 1.0 ['ENSG00000004799|ENST00000005178|PDK4', 'ENST00000468445.1_1_7:95216267-95216813:-|nuORF', 'ENST00000512204.5_1_17:48185497-48187458:+|nuORF', 'ENST00000473796.1_1_7:95214955-95221973:-|nuORF', 'nc|ENSG00000005882|Q15119-2|PDK2', 'ENSG00000005882|ENST00000503176|PDK2', 'ENSG00000152256|ENST00000282077|PDK1', 'nc|ENSG00000152256|Q15118-2|PDK1', 'ENSG00000067992|ENST00000379162|PDK3', 'nc|ENSG00000067992|Q15120-2|PDK3'] 62569 10789 LLTSSNPP True PC9_epitope_Rep2 827.43888305375 827.43778993586 46.817 2 -0.7120608480164731 0.21412489989574046 1.0 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40', 'nc|ENSG00000203993|Q9H2J1|ARRDC1-AS1', 'ENST00000371417.3_1_9:140510123-140512388:-|nuORF'] 121248 10657 VGGSDFEKVQE True H1975_Epitope_Rep1 1193.5564319871298 1193.55532993586 45.948 2 -0.7122063546056481 0.21423175706300046 1.0 ['ENSG00000140650|ENST00000268261|PMM2', 'nc|ENSG00000140650|O15305-2|PMM2', 'ENST00000564030.5_1_16:8891706-8900277:+|nuORF'] 93224 13735 RRRRRRPPPRR True NCI_RA007_Epitope_Rep5 1557.9777444190497 1557.97609490379 59.516 3 -0.712208759679682 0.21423175706300046 1.0 ['ENST00000533683.6_2_19:14201006-14201489:-|nuORF'] 81659 27724 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 116.95 3 -0.7122103224737987 0.21423175706300046 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 66076 11331 LSNLERLEKYR True NCI_RA007_Epitope_Rep1 1419.78341223019 1419.7823099358602 48.046 2 -0.7122133458268085 0.21423175706300046 1.0 ['ENSG00000204316|ENST00000309352|MRPL38', 'ENST00000410030.1_1_17:73900359-73901082:-|nuORF', 'ENST00000464758.1_1_17:73900462-73900977:-|nuORF', 'ENST00000493383.5_1_17:73897833-73900929:-|nuORF', 'ENST00000477736.5_1_17:73897061-73900795:-|nuORF', 'ENST00000493104.5_1_17:73897660-73900929:-|nuORF'] 65017 11439 LSDIPLKPEV True H1975_Epitope_Rep1 1109.63322575585 1109.6321299358601 48.98 2 -0.7122264196403422 0.21423175706300046 1.0 ['ENSG00000136478|ENST00000584379|TEX2', 'nc|ENSG00000136478|Q8IWB9-2|TEX2'] 19661 8632 ELRVFVGEEDP True NCI_RA007_Epitope_Rep2 1288.6299312805597 1288.62882993586 38.221 2 -0.7122357602455054 0.21423175706300046 1.0 ['ENSG00000149781|ENST00000345728|FERMT3', 'nc|ENSG00000149781|Q86UX7|FERMT3'] 99981 8937 SLIRPVNTP True PC9_epitope_Rep1 995.57637958607 995.57528993586 39.217 2 -0.7122694460139194 0.21423175706300046 1.0 ['LTR8_dup2971|chr17:8380695-8381392:+|3.030860960331466|0.2447948664736123|3.63|502.0|5|1|sense'] 32542 15209 GGTDFPAAQT True PC9_epitope_Rep4 963.4297749220299 963.42922496793 66.426 1 -0.7122753339931419 0.21423175706300046 1.0 ['nc|ENSG00000144749|Q96JA1-2|LRIG1'] 128718 19830 VSPKEVATL True PC9_epitope_Rep2 942.5385970950199 942.53750993586 81.667 2 -0.7123185224612233 0.21423175706300046 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'ENST00000486327.6_1_19:47880370-47884327:+|nuORF'] 88152 11160 QWRMVTFLSRF True NCI_RA007_Epitope_Rep1 1469.7601746878097 1469.75906993586 47.408 2 -0.7123433317045434 0.21425873608194468 1.0 ['ENST00000262461.6_1_5:127522363-127522444:+|nuORF'] 122257 20571 VGRRKKGRRH True PC9_epitope_Rep6 1248.7751880186797 1248.77408993586 91.855 2 -0.7123573810493977 0.2142706067198453 1.0 ['ENST00000470487.5_1_3:167813142-167813508:-|nuORF'] 44450 8977 INLKEKKY True NCI_RA007_Epitope_Rep2 1034.6124307416198 1034.61132993586 39.534 2 -0.7123987909335885 0.21428139822955378 1.0 ['ENSG00000151576|ENST00000281273|QTRT2', 'nc|ENSG00000151576|Q9H974-4|QTRT2', 'ENST00000495782.1_1_3:113801459-113804748:+|nuORF', 'ENST00000483272.1_1_3:113798714-113804748:+|nuORF', 'nc|ENSG00000151576|Q9H974-2|QTRT2', 'nc|ENSG00000151576|Q9H974-3|QTRT2'] 44834 3970 IPWFQQWAHR True NCI_RA007_Epitope_Rep2 1367.68872399971 1367.68708490379 20.079 3 -0.7124229851258543 0.21428139822955378 1.0 ['ENST00000599145.1_1_19:58927017-58927281:+|nuORF'] 15655 16226 ECDDCDSC True PC9_epitope_Rep1 888.1935696015601 888.19246993586 67.232 2 -0.7124600564491669 0.21428139822955378 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 116316 9437 TVWLDLLK True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 41.301 2 -0.712467421643716 0.21428139822955378 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'FARP1|p.H110Qfs*8|1|0.2|ENSG00000152767|chr13:98368127-98368127|C/-|frameshift_variant', 'ENST00000595380.5_1_13:98996033-99036984:+|nuORF', 'ENST00000601853.5_1_13:98996033-99030171:+|nuORF'] 90066 10946 RGLEGPGGL True PC9_epitope_Rep2 854.4610154806599 854.45990993586 47.424 2 -0.7124686870079373 0.21428139822955378 1.0 ['IGSF9B|p.P956Lfs*37|1|0.34|ENSG00000080854|chr11:133920863-133920863|C/-|frameshift_variant', 'nc|ENSG00000080854|Q9UPX0|IGSF9B', 'ENSG00000080854|ENST00000533871|IGSF9B'] 91474 14401 RNRWFQEFWQH True H1975_Epitope_Rep1 1632.7698278547198 1632.7687299358602 60.589 2 -0.7124835504129579 0.21428139822955378 1.0 ['GRM5|p.P353R|1|0.37|ENSG00000168959|chr11:88653257-88653257|G/C|missense_variant'] 31087 20209 GAYKFEKDF True PC9_epitope_Rep1 1103.5287606873098 1103.52766993586 82.563 2 -0.7125334571062549 0.21433858517500265 1.0 ['ENSG00000120137|ENST00000239231|PANK3', 'ENST00000525487.2_1_11:50227376-50227820:+|nuORF'] 34754 22568 GQRLPVEDFSL True PC9_epitope_Rep1 1259.6510010783097 1259.64990993586 91.614 2 -0.7125472787333919 0.21434397752333767 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 130541 7588 VTYFWRFKLFL True H1975_Epitope_Rep1 1518.8387422783396 1518.83710490379 34.179 3 -0.7125556757570976 0.21434397752333767 1.0 ['ENSG00000125484|ENST00000372146|GTF3C4'] 127309 19836 VQLVNLWPP True PC9_epitope_Rep3 1064.60186605792 1064.6007699358602 81.534 2 -0.7125620112959906 0.21434397752333767 1.0 ['ENSG00000187492|ENST00000412678|CDHR4'] 55366 17714 LASNILILV True PC9_epitope_Rep4 954.61136811246 954.61026993586 76.162 2 -0.7126006290812202 0.21435152320681478 1.0 ['ADGRB2|p.C1012Sfs*79|1|0.17|ENSG00000121753|chr1:31736668-31736668|C/-|frameshift_variant', 'nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2'] 99305 7760 SLDLDGRFSP True H1975_Epitope_Rep3 1105.54038800017 1105.53928993586 34.833 2 -0.7126667124284582 0.21435152320681478 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 89698 12962 REYFNRYREVP True PC9_epitope_Rep3 1527.7582601115098 1527.75661490379 54.883 3 -0.7127245876906944 0.21435152320681478 1.0 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 23473 4965 EVYFFQCRRDF True NCI_RA007_Epitope_Rep2 1508.6870693171998 1508.6859699358602 23.934 2 -0.7127327581677458 0.21435152320681478 1.0 ['DZIP3|p.L867F|2|0.15|ENSG00000198919|chr3:108674089-108674089|A/T|missense_variant'] 19583 10444 ELRERFPSH True H1975_Epitope_Rep1 1169.5941549085298 1169.59304993586 45.127 2 -0.7127417296207189 0.21435152320681478 1.0 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2'] 45624 9599 ISHGTCDPLT True PC9_epitope_Rep1 1042.4753452154598 1042.4742499358601 41.778 2 -0.7127733287415774 0.21435152320681478 1.0 ['ENST00000215906.5_1_22:26839892-26840330:+|nuORF'] 83813 7368 QEERRWNKRT True NCI_RA007_Epitope_Rep1 1401.7225433091298 1401.72088490379 32.654 3 -0.7127982702118275 0.21435152320681478 1.0 ['ENSG00000164754|ENST00000297338|RAD21'] 85403 5331 QLEHLHAG True NCI_RA007_Epitope_Rep2 903.45626445339 903.45516993586 25.356 2 -0.7128387285439828 0.2144054613281781 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2'] 67979 13991 LTLQTQQQL True PC9_epitope_Rep3 1071.59242357303 1071.5913299358601 58.887 2 -0.7128404739493897 0.2144054613281781 1.0 ['ENST00000354436.6_2_16:69711205-69718807:+|nuORF'] 2312 4177 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 21.186 2 -0.712963947430296 0.21446263517187217 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 106103 13191 SVNENGLVTV True PC9_epitope_Rep5 1030.5294889632999 1030.52838993586 55.744 2 -0.7129751191898976 0.21447449896545995 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-3|FXR1'] 61538 15936 LLGFCMEP True PC9_epitope_Rep3 908.41359690604 908.41248993586 66.444 2 -0.7132514707778049 0.21462228531730448 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 109809 24862 THKRIHIG True PC9_epitope_Rep4 960.5617325814399 960.5611849679301 104.15 1 -0.7133257905769645 0.2146643509778751 1.0 ['ENSG00000213988|ENST00000418063|ZNF90'] 95272 10669 SADRGLVL True PC9_epitope_Rep4 829.46576650793 829.46466993586 48.786 2 -0.7134021788756642 0.2147150321664804 1.0 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-7|FCAR'] 128950 15382 VSVGSWNL True PC9_epitope_Rep3 860.43921740692 860.43812993586 64.323 2 -0.7134097573764903 0.2147150321664804 1.0 ['ENST00000393295.7_1_3:128879898-128879931:-|nuORF'] 63458 8552 LPGYQWHWVKQ True H1975_Epitope_Rep1 1440.7302544585202 1440.72914993586 37.822 2 -0.7134535167229645 0.2147150321664804 1.0 ['ALKBH1|p.A252Pfs*25|1|0.19|ENSG00000100601|chr14:77674229-77674229|G/-|frameshift_variant', 'ENSG00000100601|ENST00000216489|ALKBH1'] 43140 17277 IGPTLNIL True H1975_Epitope_Rep3 839.5116540711899 839.51110496793 72.103 1 -0.7134648822152846 0.21474199247949985 1.0 ['ENSG00000096433|ENST00000605930|ITPR3'] 56815 12904 LECFEKIRPGE True NCI_RA007_Epitope_Rep1 1319.6543722065896 1319.6532699358602 54.185 2 -0.7134722215295127 0.21475385080036244 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 109808 24664 THKRIHIG True PC9_epitope_Rep4 960.5617325814399 960.5611849679301 103.36 1 -0.7134911275929144 0.21478618023677218 1.0 ['ENSG00000213988|ENST00000418063|ZNF90'] 66557 11252 LSSKEIKLL True PC9_epitope_Rep4 1029.6433965167298 1029.6422899358602 51.054 2 -0.7135020242059756 0.21478618023677218 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'ENST00000525964.6_1_11:134022841-134052943:-|nuORF'] 121305 5220 VGHLRVRRFWS True PC9_epitope_Rep2 1411.79492040375 1411.79326490379 25.467 3 -0.7135060586363215 0.21478618023677218 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 61840 22775 LLLCLLPLAP True PC9_epitope_Rep2 1064.6667748136 1064.66566993586 93.093 2 -0.7135389182596042 0.21478618023677218 1.0 ['ENSG00000126243|ENST00000246529|LRFN3'] 95043 14742 RYRKAYTVLLY True H1975_Epitope_Rep2 1444.8190694629197 1444.8179699358602 61.865 2 -0.7135929703942812 0.21479479358560083 1.0 ['ALPG|p.D403Y|1|0.11|ENSG00000163286|chr2:232409355-232409355|G/T|missense_variant'] 125896 2753 VNTDSVHTQIQ True H1975_Epitope_Rep3 1240.6047791618798 1240.60368993586 14.673 2 -0.7136073629941 0.21479479358560083 1.0 98708 9764 SIRKEYSV True PC9_epitope_Rep2 980.52909504048 980.52798993586 42.896 2 -0.7136567504729029 0.214806649855799 1.0 ['ENSG00000117594|ENST00000367027|HSD11B1'] 36074 22083 GVEDCMIC True H1975_Epitope_Rep1 868.3128968885999 868.31178993586 91.859 2 -0.713710061622961 0.21481850576795314 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 79718 15864 PHPVGKDPV True PC9_epitope_Rep3 944.5079656730799 944.50686993586 66.171 2 -0.7137306809405127 0.2148271176204137 1.0 ['ENST00000570069.5_1_16:1829856-1829988:+|nuORF'] 96442 6589 SEIKQKSL True NCI_RA007_Epitope_Rep5 931.53384606775 931.53274993586 32.005 2 -0.7137350450217332 0.2148271176204137 1.0 ['ENSG00000120688|ENST00000379487|WBP4'] 125703 13813 VNDLRYYRLC True PC9_epitope_Rep1 1313.65504091293 1313.65394993586 57.975 2 -0.7137596287902838 0.21485082739461286 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 95830 15939 SDIEIENGF True NCI_RA007_Epitope_Rep1 1022.4556553166999 1022.45454993586 66.099 2 -0.7137605270807399 0.21485082739461286 1.0 ['CFHR4|p.T541Kfs*30|2|0.26|ENSG00000134365|chr1:196918294-196918294|C/-|frameshift_variant', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4', 'ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4'] 91229 24081 RLRRKWLN True NCI_RA007_Epitope_Rep2 1140.6992291137599 1140.6981299358602 101.17 2 -0.7137993869357981 0.21485943775100402 1.0 ['ENSG00000197892|ENST00000524189|KIF13B'] 104111 410 SRWTRAARPCS True NCI_RA007_Epitope_Rep5 1289.6411221842898 1289.63947490379 2.3648 3 -0.7138044224457655 0.21485943775100402 1.0 ['ENST00000480818.3_1_9:139838480-139838585:-|nuORF'] 65720 14641 LSHSDAYVI True PC9_epitope_Rep4 1003.49746055903 1003.49636993586 64.246 2 -0.7138319378973823 0.21488638937117838 1.0 ['ENSG00000221838|ENST00000359593|AP4M1'] 123930 19672 VKKKKKKQQKK True NCI_RA007_Epitope_Rep3 1397.9558377192495 1397.95420490379 85.789 3 -0.7138907339842051 0.21493380032911125 1.0 ['FAM133A|p.H230Q|1|0.2|ENSG00000179083|chrX:93710109-93710109|C/A|missense_variant'] 95219 5367 SAAPTRLAA True PC9_epitope_Rep4 856.4766655447999 856.47556993586 27.365 2 -0.7139061224925822 0.21493380032911125 1.0 ['NKX2-2|p.D124Vfs*186|1|0.35|ENSG00000125820|chr20:21512374-21512375|-/A|frameshift_variant'] 67752 12112 LTGSLSGPFP True PC9_epitope_Rep1 974.5072969667399 974.50618993586 51.451 2 -0.713910474629891 0.21493380032911125 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 16944 10236 EGERVELIALI True H1975_Epitope_Rep1 1240.7027022979998 1240.70160993586 44.316 2 -0.7139524803771862 0.21493380032911125 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 80802 20647 PLSTGSSFIL True PC9_epitope_Rep4 1020.54916177872 1020.5485749679301 87.575 1 -0.7140503630748916 0.21497584541062803 1.0 ['ENSG00000102241|ENST00000218364|HTATSF1'] 2398 9683 AEQKKWEEQHE True NCI_RA007_Epitope_Rep2 1440.66335666716 1440.66224993586 42.283 2 -0.7140941768864478 0.21498769644178076 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 75853 19674 NRDLPRRPL True NCI_RA007_Epitope_Rep2 1135.65742387143 1135.6563299358602 81.477 2 -0.7141387788138672 0.21499954711512334 1.0 ['ENST00000469655.5_1_1:110775187-110775572:+|nuORF'] 46133 7129 ITALEEEK True NCI_RA007_Epitope_Rep1 931.48622716899 931.48512993586 31.72 2 -0.714216600330712 0.2150685345087857 1.0 ['ENSG00000145309|ENST00000273936|CABS1'] 81055 5605 PPAQAWAAGP True H1975_Epitope_Rep2 964.4766655447997 964.47556993586 26.561 2 -0.7142424395069019 0.2150685345087857 1.0 ['ENSG00000179943|ENST00000221665|FIZ1'] 122143 17371 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 73.598 1 -0.7142606341113004 0.21509547890406824 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 80695 12208 PLPVPPPTG True PC9_epitope_Rep4 873.49600400705 873.49490993586 54.777 2 -0.7142869312362108 0.2151040801847631 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 123352 14007 VHYYAIWKYLY True PC9_epitope_Rep3 1517.77072228817 1517.7690749037902 58.959 3 -0.7143132428465756 0.2151040801847631 1.0 ['ENSG00000108960|ENST00000262065|MMD'] 100511 6068 SLPPKPSR True NCI_RA007_Epitope_Rep5 880.51305105352 880.51194993586 30.024 2 -0.7143182513447427 0.21511592802801593 1.0 ['ENST00000571722.3_1_17:18966825-18967116:-|nuORF'] 115232 13711 TVCWSVLGSL True PC9_epitope_Rep3 1063.5372171960298 1063.5361099358602 57.82 2 -0.7143724157821953 0.21512128118820847 1.0 ['ENST00000457408.6_3_7:44618614-44618746:-|nuORF'] 51947 11103 KKVKKKKKKK True NCI_RA007_Epitope_Rep1 1269.9336457226898 1269.9325499358602 47.187 2 -0.7143753122626905 0.21512128118820847 1.0 ['ENSG00000187257|ENST00000334955|RSBN1L'] 7572 5850 ASGGAWKS True PC9_epitope_Rep1 762.36605246666 762.36494993586 27.316 2 -0.7144297504275055 0.21512128118820847 1.0 ['TSPYL2|p.S127Afs*20|1|0.17|ENSG00000184205|chrX:53082870-53082870|G/-|frameshift_variant'] 56655 6278 LEAAGDKF True PC9_epitope_Rep2 849.42323298961 849.42212993586 29.544 2 -0.7144789891286323 0.21516331582442794 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 118420 8400 VDNMACRLAR True NCI_RA007_Epitope_Rep2 1147.5590323531098 1147.55792993586 37.316 2 -0.7146048611867822 0.2152053491917347 1.0 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-2|ARHGEF28'] 45651 11151 ISILCWYQRL True PC9_epitope_Rep2 1293.69036379249 1293.68872490379 48.219 3 -0.7146904392838589 0.21521719443354365 1.0 ['ENST00000492094.6_2_6:9708077-9769170:-|nuORF'] 121409 13795 VGHVDEFLT True PC9_epitope_Rep4 1015.4974605590301 1015.49636993586 60.959 2 -0.714744388048136 0.21524413251830052 1.0 ['ENSG00000142623|ENST00000375471|PADI1'] 72862 17087 NAPKALIV True PC9_epitope_Rep6 824.51198842436 824.51088993586 78.292 2 -0.7147903271599344 0.21526782075856135 1.0 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 285 4352 AAGVLYRT True NCI_RA007_Epitope_Rep5 849.47085188837 849.46974993586 23.351 2 -0.7147984914670996 0.21526782075856135 1.0 ['ENSG00000140948|ENST00000671377|ZCCHC14'] 42776 16144 IFHGVYVPHF True PC9_epitope_Rep5 1214.6236641316598 1214.62201490379 67.086 3 -0.7148417352218261 0.21527966434241902 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|253|2|anti-sense'] 85812 10831 QLYWYYLEQFQ True PC9_epitope_Rep3 1579.7347307022699 1579.7330849037899 46.634 3 -0.7148752708121555 0.2152871048064589 1.0 ['ENST00000523948.5_1_8:56686169-56737149:+|nuORF', 'ENSG00000137574|ENST00000260129|TGS1'] 36367 7062 GVHQGGNLL True PC9_epitope_Rep5 893.47191451753 893.47080993586 32.132 2 -0.7148803577888656 0.2152871048064589 1.0 ['nc|ENSG00000020219|A6NM43|CCT8L1P', 'CCT8L2|p.I552Sfs*4|1|0.32|ENSG00000198445|chr22:16590897-16590897|T/-|frameshift_variant', 'ENSG00000198445|ENST00000359963|CCT8L2'] 44172 14602 ILQREATL True PC9_epitope_Rep2 942.5498304850599 942.54872993586 61.435 2 -0.7148963632816476 0.2152871048064589 1.0 ['nc|ENSG00000124019|Q9H5Z6-2|FAM124B', 'ENSG00000124019|ENST00000409685|FAM124B'] 61052 7040 LLASVGSNP True H1975_Epitope_Rep3 856.46543215476 856.46432993586 32.044 2 -0.7149113341441806 0.2152871048064589 1.0 ['ENSG00000206530|ENST00000393845|CFAP44', 'nc|ENSG00000206530|Q96MT7-1|CFAP44', 'CFAP44|p.T268Qfs*47|1|0.12|ENSG00000206530|chr3:113409195-113409195|C/-|frameshift_variant', 'CFAP44|p.I353Afs*15|1|0.14|ENSG00000206530|chr3:113403956-113403966|CCACTTTGATC/-|frameshift_variant'] 24887 2620 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 13.86 2 -0.7149258750966961 0.2152871048064589 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 80443 19674 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 82.406 3 -0.7149971488359761 0.2152871048064589 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 120194 17617 VFLPKDVALA True PC9_epitope_Rep2 1071.63283183303 1071.6317299358602 73.043 2 -0.7150232755047332 0.2152871048064589 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 128087 9787 VRRLVKILLLG True PC9_epitope_Rep6 1278.8863611770998 1278.8847149037902 48.095 3 -0.715068989986024 0.2153291280596384 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 104105 18781 SRWIILMQL True PC9_epitope_Rep2 1158.65833538822 1158.6572299358602 77.612 2 -0.7151193854133562 0.2153560595771651 1.0 ['ENST00000244217.5_1_2:71337227-71351364:-|nuORF'] 115480 21299 TVFVQENNPPG True PC9_epitope_Rep3 1200.57750178488 1200.57640993586 87.222 2 -0.7151974883832347 0.21537649011619134 1.0 ['PCDHA3|p.K465Q|1|0.29|ENSG00000255408|chr5:140802590-140802590|A/C|missense_variant'] 33300 6691 GLAVHDIAEK True NCI_RA007_Epitope_Rep1 1051.56620882519 1051.5651099358602 30.037 2 -0.7152225950881165 0.21537649011619134 1.0 ['ENST00000529654.5_1_8:145616841-145618286:+|nuORF', 'ENSG00000173137|ENST00000308860|ADCK5'] 33370 15402 GLEQHLIV True PC9_epitope_Rep4 907.5127167003499 907.51160993586 67.175 2 -0.7152518902936766 0.21537649011619134 1.0 ['NACA2|p.P17Rfs*105|1|0.25|ENSG00000253506|chr17:61591131-61591131|G/-|frameshift_variant'] 10687 4733 CSGDDDDDNDD True NCI_RA007_Epitope_Rep3 1184.3047702012 1184.3036699358602 25.568 2 -0.7152678858722553 0.2153850796716562 1.0 ['ENST00000322002.4_1_2:5834175-5834352:+|nuORF'] 95510 16083 SAPTGHTFSV True PC9_epitope_Rep2 1002.47705946762 1002.47596993586 67.12 2 -0.7152734110273337 0.2153850796716562 1.0 ['ENSG00000116685|ENST00000376572|KIAA2013', 'nc|ENSG00000116685|Q8IYS2-2|KIAA2013'] 130906 24645 VVHRGRPG True NCI_RA007_Epitope_Rep5 876.5042177053199 876.50366496793 102.28 1 -0.7153912432495669 0.2154087575821589 1.0 ['ENSG00000129911|ENST00000250916|KLF16'] 80174 11063 PLAAGIVG True NCI_RA007_Epitope_Rep5 696.41702541036 696.4164749679301 49.188 1 -0.715398951759982 0.2154087575821589 1.0 ['ENSG00000159131|ENST00000381815|GART', 'nc|ENSG00000159131|P22102-2|GART', 'ENST00000476524.1_1_21:34903719-34911621:-|nuORF'] 78536 16899 PDLSKHDFL True PC9_epitope_Rep2 1070.5396597241802 1070.53856993586 70.247 2 -0.7154452945647719 0.21541734564548254 1.0 ['ENSG00000124772|ENST00000244751|CPNE5'] 131329 18185 VVRNCISFI True PC9_epitope_Rep5 1049.56918603065 1049.5680899358601 74.959 2 -0.7154740696207652 0.21541734564548254 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2', 'ENST00000526353.1_1_11:9983413-9985421:-|nuORF'] 41258 8707 IAFDPYYYFQK True NCI_RA007_Epitope_Rep2 1453.69180326113 1453.69070993586 38.516 2 -0.7155445158800788 0.21545935995896012 1.0 ['ENSG00000185313|ENST00000449082|SCN10A'] 136136 7749 YGGLRGAI True PC9_epitope_Rep1 805.4446371405298 805.44354993586 34.628 2 -0.7155669009051109 0.21549812157697007 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 102405 8270 SPVVPAPR True PC9_epitope_Rep3 821.47593726881 821.47484993586 36.785 2 -0.7156058257017199 0.21549812157697007 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 122554 20495 VGTAQRLLQRP True PC9_epitope_Rep6 1237.7255034312498 1237.7244099358602 91.558 2 -0.7156568544500481 0.2155401327700664 1.0 ['ENSG00000167971|ENST00000343516|CASKIN1'] 12130 18491 DIIDYFRK True H1975_Epitope_Rep2 1068.56039516876 1068.55928993586 76.729 2 -0.7156768482491539 0.21554871609184997 1.0 ['ENSG00000043462|ENST00000046794|LCP2'] 18783 14153 ELDRKAAEL True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 66.309 2 -0.715679702525185 0.21554871609184997 1.0 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000567638.1_1_15:75140939-75144521:-|nuORF', 'ENST00000563829.5_1_15:75137426-75144629:-|nuORF'] 78440 7158 PCEWDWHPG True PC9_epitope_Rep3 1125.4338147566498 1125.4327099358602 32.546 2 -0.7157062412746982 0.21556055097083718 1.0 ['ENST00000377259.5_2_9:71766567-71833305:+|nuORF'] 26975 13059 FLKMNKWCEYF True NCI_RA007_Epitope_Rep5 1507.69921422403 1507.6981099358602 56.908 2 -0.7157127994688639 0.21557238549272825 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 119998 15628 VFATDDGF True PC9_epitope_Rep2 870.3759484440199 870.37484993586 65.39 2 -0.715719176044199 0.2155842196575394 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 12694 19540 DLFGDKEFL True PC9_epitope_Rep4 1082.52842633414 1082.52732993586 83.282 2 -0.7157485743030424 0.2155960534652868 1.0 ['nc|ENSG00000107798|P38571-2|LIPA', 'ENSG00000107798|ENST00000336233|LIPA'] 9951 19396 AYRLTPKLM True PC9_epitope_Rep3 1091.6161362230698 1091.61502993586 79.83 2 -0.7157591863662048 0.2156067097085621 1.0 ['RAD21-EIF3H|4|fusion', 'RAD21-EIF3H|2|fusion', 'RAD21-EIF3H|1|fusion', 'RAD21-EIF3H|3|fusion', 'ENSG00000147677|ENST00000521861|EIF3H', 'EIF3H|p.E217Nfs*30|1|0.19|ENSG00000147677|chr8:116655914-116655914|C/-|frameshift_variant'] 124909 12409 VLLRMLYPRVW True PC9_epitope_Rep6 1444.83769673252 1444.83658993586 59.158 2 -0.7157600463581926 0.2156067097085621 1.0 ['ENSG00000144031|ENST00000360589|ANKRD53'] 41328 4909 IAKQGKAVL True NCI_RA007_Epitope_Rep3 926.5913013742198 926.59020993586 26.299 2 -0.7158105771922454 0.2156067097085621 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant'] 11886 21283 DHPQDHELIDP True PC9_epitope_Rep3 1314.5840437173001 1314.5829499358601 87.16 2 -0.7158420652227897 0.2156067097085621 1.0 ['nc|ENSG00000138036|Q8TCX1-2|DYNC2LI1'] 92809 25010 RRLKHFPR True NCI_RA007_Epitope_Rep5 1108.67301436592 1108.67247496793 103.7 1 -0.7158879343582817 0.2156067097085621 1.0 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 122134 16501 VGRHQRGR True NCI_RA007_Epitope_Rep3 964.5427284723598 964.54217496793 72.705 1 -0.715912261529904 0.2156067097085621 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 15475 6188 EAPTQSPGTSP True H1975_Epitope_Rep3 1070.48801807414 1070.4869299358602 28.815 2 -0.7159611431268266 0.21564871102529679 1.0 ['ENSG00000174038|ENST00000312292|C9orf131', 'nc|ENSG00000174038|Q5VYM1-3|SPATA31G1', 'nc|ENSG00000174038|Q5VYM1-2|SPATA31G1'] 95070 5855 RYSIYRDLWER True H1975_Epitope_Rep1 1555.7895602397896 1555.78792490379 27.591 3 -0.716013647091545 0.21567237348216306 1.0 ['ENSG00000170892|ENST00000396388|TSEN34'] 54501 6501 LAADPSHP True NCI_RA007_Epitope_Rep4 806.3922672145 806.39116993586 31.611 2 -0.7160201614931339 0.21567237348216306 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 80624 25022 PLPLIKVMLLI True H1975_Epitope_Rep2 1248.82433808416 1248.82270490379 102.82 3 -0.7160423993316224 0.2156765153914604 1.0 ['ENST00000555357.1_1_12:56361683-56362031:+|nuORF'] 30465 8202 GAGGSGAR True NCI_RA007_Epitope_Rep2 631.30378656327 631.30323496793 36.539 1 -0.7160548906756666 0.2156765153914604 1.0 ['ENST00000375098.7_1_9:100872213-100881366:-|nuORF'] 15682 8159 ECTCTPFLVL True PC9_epitope_Rep5 1124.5246039069998 1124.5229549037902 36.324 3 -0.7160696802432944 0.2156765153914604 1.0 ['ENST00000355947.6_1_7:99489832-99489904:-|nuORF'] 10379 14304 CKKWADIV True PC9_epitope_Rep1 961.5055231449298 961.50442993586 59.845 2 -0.7160708587676701 0.2156765153914604 1.0 ['ENSG00000134897|ENST00000257336|BIVM', 'nc|ENSG00000134897|Q86UB2-2|BIVM', 'ENST00000490317.1_1_13:103473357-103492212:+|nuORF'] 5277 6430 ALRKQVAVVA True PC9_epitope_Rep4 1053.66586329681 1053.66476993586 31.828 2 -0.7160736914177066 0.2156765153914604 1.0 ['ENSG00000153237|ENST00000283233|CCDC148'] 114455 7739 TSEKLEGKEP True H1975_Epitope_Rep2 1116.5662683948399 1116.56516993586 34.72 2 -0.7160951513137249 0.2156765153914604 1.0 ['ENST00000509475.5_1_4:40892379-41016395:-|nuORF', 'nc|ENSG00000163697|Q92870-2|APBB2', 'nc|ENSG00000163697|Q92870|APBB2', 'ENSG00000163697|ENST00000508593|APBB2'] 134691 18952 WWQWLKWRRL True NCI_RA007_Epitope_Rep1 1556.8517070038797 1556.8506099358601 77.861 2 -0.7160966750617432 0.2156765153914604 1.0 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 126179 8633 VPGDGPEP True PC9_epitope_Rep3 766.34973369618 766.34862993586 38.158 2 -0.7161160118074407 0.2156765153914604 1.0 ['ENSG00000167874|ENST00000301599|TMEM88'] 10781 7037 DAAEEFHTYI True NCI_RA007_Epitope_Rep1 1194.5193182024198 1194.51822993586 31.37 2 -0.7161370348757361 0.2156883445945946 1.0 ['CASQ1|p.P206T|1|0.48|ENSG00000143318|chr1:160195499-160195499|C/A|missense_variant'] 105256 5525 STSRQFVDGP True H1975_Epitope_Rep2 1092.5199869087598 1092.5188899358602 26.26 2 -0.7161857887915636 0.21569692033903418 1.0 ['ENSG00000161800|ENST00000312377|RACGAP1', 'RACGAP1|p.D413Mfs*10|1|0.34|ENSG00000161800|chr12:49994233-49994233|C/-|frameshift_variant', 'ENST00000548158.1_1_12:50393384-50398020:-|nuORF'] 126432 5034 VPLNWLRSRPY True PC9_epitope_Rep3 1399.77245362367 1399.7707949037901 24.452 3 -0.7161865231055589 0.21569692033903418 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 13141 12523 DLSSDISVLVP True PC9_epitope_Rep4 1143.60231955039 1143.6006749037901 55.989 3 -0.7161991117824313 0.21570874869923237 1.0 ['MTA3|p.A251D|2|0.17|ENSG00000057935|chr2:42682450-42682450|C/A|missense_variant'] 92801 14616 RRLENRFYRRI True H1975_Epitope_Rep3 1577.9015107306097 1577.9004099358601 61.588 2 -0.7162550231527333 0.21572057670266032 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'ENST00000473691.1_1_X:79938122-79975072:-|nuORF'] 59211 8671 LGGAQEVPGL True NCI_RA007_Epitope_Rep4 939.5025459394698 939.50144993586 40.14 2 -0.7162945348157773 0.21574097811826093 1.0 ['ENST00000574343.5_1_17:79862711-79863545:-|nuORF'] 98995 6622 SKKRRWAP True NCI_RA007_Epitope_Rep4 1027.6039317465898 1027.6028299358602 32.098 2 -0.716317331151507 0.21574097811826093 1.0 ['ENST00000484875.5_1_20:46386013-46414798:-|nuORF', 'ENST00000437955.1_1_20:46386013-46414096:-|nuORF', 'ENST00000359930.8_1_20:46386013-46414675:-|nuORF'] 61650 5299 LLHGFGGG True NCI_RA007_Epitope_Rep5 756.39187329168 756.39076993586 27.076 2 -0.7163288121433736 0.21574097811826093 1.0 ['ENSG00000011198|ENST00000644371|ABHD5'] 44587 13477 IPGAWADLTVA True PC9_epitope_Rep5 1112.5866099166 1112.58550993586 56.856 2 -0.716416019952831 0.21579153723195704 1.0 ['PLCB2|p.A1136Qfs*3|1|0.32|ENSG00000137841|chr15:40288867-40288867|C/-|frameshift_variant', 'nc|ENSG00000137841|Q00722-3|PLCB2', 'nc|ENSG00000137841|Q00722-2|PLCB2', 'ENSG00000137841|ENST00000260402|PLCB2', 'ENST00000558588.5_1_15:40583969-40599873:-|nuORF'] 19530 20258 ELQQLTLTGFG True NCI_RA007_Epitope_Rep1 1205.62920300457 1205.62867496793 83.005 1 -0.7164326536387623 0.21579153723195704 1.0 ['ENST00000591340.5_1_19:37039208-37045651:-|nuORF'] 12253 7351 DIRMIISGTT True NCI_RA007_Epitope_Rep1 1105.58014463717 1105.5790499358602 32.587 2 -0.7164352728784958 0.21579153723195704 1.0 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000513084.5_1_5:96245508-96253306:+|nuORF'] 63630 20336 LPNEMSWLY True NCI_RA007_Epitope_Rep2 1151.53213181559 1151.5315749679298 84.134 1 -0.7165255806943788 0.2158636809168363 1.0 ['ENST00000392708.8_1_11:125490872-125490974:+|nuORF'] 71109 15221 METLRCLMF True H1975_Epitope_Rep2 1142.52864374162 1142.5275499358602 63.705 2 -0.7165747904926646 0.2158873290408191 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 94380 9720 RYEIKNSVW True PC9_epitope_Rep1 1193.61930702721 1193.61766490379 42.246 3 -0.7165854533837323 0.2158873290408191 1.0 ['ZNF613|p.G156W|1|0.18|ENSG00000176024|chr19:51944349-51944349|G/T|missense_variant'] 41936 7536 IEAQELAR True PC9_epitope_Rep2 928.4977949121999 928.49668993586 34.354 2 -0.7166125035392964 0.21588938646884093 1.0 ['nc|ENSG00000163681|Q14BN4-5|SLMAP', 'nc|ENSG00000163681|Q14BN4-4|SLMAP', 'nc|ENSG00000163681|Q14BN4-2|SLMAP', 'nc|ENSG00000163681|Q14BN4-3|SLMAP', 'nc|ENSG00000163681|Q14BN4|SLMAP', 'ENSG00000163681|ENST00000671191|SLMAP'] 127848 24445 VRLRRLQQLVL True NCI_RA007_Epitope_Rep5 1392.90413649956 1392.90357496793 101.5 1 -0.7166221132738136 0.21588938646884093 1.0 ['nc|ENSG00000104936|Q09013-12|DMPK', 'nc|ENSG00000104936|Q09013-10|DMPK', 'nc|ENSG00000104936|Q09013-11|DMPK', 'nc|ENSG00000104936|Q09013-15|DMPK', 'ENSG00000104936|ENST00000291270|DMPK', 'nc|ENSG00000104936|Q09013-16|DMPK'] 99735 10669 SLGIIRNSCCM True PC9_epitope_Rep1 1195.55117009135 1195.5500699358602 45.928 2 -0.7166318189779977 0.21588938646884093 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|313|2|anti-sense'] 33298 17798 GLATVDIQNP True PC9_epitope_Rep2 1026.5345743437397 1026.53346993586 73.752 2 -0.7166377116747307 0.21588938646884093 1.0 ['WAS|p.P383Lfs*62|1|0.43|ENSG00000015285|chrX:48688872-48688872|C/-|frameshift_variant', 'ENSG00000015285|ENST00000376701|WAS'] 68305 8187 LTRQNQEL True PC9_epitope_Rep4 1000.5301576696398 1000.52906993586 38.951 2 -0.7167386795375706 0.21594644311088326 1.0 ['ENSG00000089847|ENST00000318934|ANKRD24', 'nc|ENSG00000089847|Q8TF21-2|ANKRD24'] 75199 18376 NNWIYGEAL True PC9_epitope_Rep3 1078.5083595958997 1078.5072699358602 75.893 2 -0.7168100382550024 0.21598842030668094 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 62694 21305 LLWRLWEERER True H1975_Epitope_Rep1 1584.8524948495199 1584.8513899358602 88.505 2 -0.716832141917748 0.21600880499351688 1.0 ['ENST00000493723.5_1_7:24756537-24789393:-|nuORF'] 71015 10376 MERKDFETWL True PC9_epitope_Rep5 1353.6387221424498 1353.6370649037901 44.896 3 -0.7168659427950872 0.21600880499351688 1.0 ['nc|ENSG00000119402|Q9UKT8-2|FBXW2', 'ENSG00000119402|ENST00000608872|FBXW2'] 59929 20395 LHKRIALKMVM True NCI_RA007_Epitope_Rep1 1338.79920304882 1338.79756490379 83.544 3 -0.7168708625234077 0.21600880499351688 1.0 ['ENSG00000081800|ENST00000194130|SLC13A1'] 46081 6517 ISYNFIEKLK True H1975_Epitope_Rep1 1253.70197402201 1253.70031490379 30.127 3 -0.7168941449905386 0.2160206250848071 1.0 ['ENSG00000119661|ENST00000553645|DNAL1', 'nc|ENSG00000119661|Q4LDG9-3|DNAL1'] 75131 12952 NMYGKVVTV True PC9_epitope_Rep3 1009.52665251233 1009.52554993586 54.843 2 -0.7169606156241737 0.21606259799782898 1.0 ['nc|ENSG00000196235|O00267-2|SUPT5H', 'ENSG00000196235|ENST00000432763|SUPT5H', 'ENST00000599335.5_1_19:39959399-39965382:+|nuORF'] 10552 9682 CPWYRFCR True H1975_Epitope_Rep1 1129.4949755445698 1129.4938699358602 42.166 2 -0.7169818915161297 0.21608623548922057 1.0 ['ENSG00000170832|ENST00000300896|USP32'] 96272 20819 SEERTRWA True PC9_epitope_Rep3 1033.4941065140897 1033.49300993586 85.352 2 -0.7169851141540208 0.21608623548922057 1.0 ['CROT|p.H601*|1|0.46|ENSG00000005469|chr7:87398606-87398607|CA/-|frameshift_variant', 'ENSG00000005469|ENST00000331536|CROT', 'nc|ENSG00000005469|Q9UKG9-3|CROT'] 110596 7874 TISTEKPSI True PC9_epitope_Rep2 974.5284263341399 974.5273299358599 35.655 2 -0.7170564713343276 0.2160915381484329 1.0 ['ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.P2337Tfs*7|1|0.63|ENSG00000146839|chr7:100787917-100787918|-/A|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 25033 14417 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 63.363 2 -0.7170678827592618 0.2160915381484329 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 120074 11123 VFGGFYLLF True NCI_RA007_Epitope_Rep5 1061.5586042636098 1061.55750993586 49.421 2 -0.7170773336856985 0.2160915381484329 1.0 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-2|SLC39A8'] 97279 15256 SFQLKTCA True H1975_Epitope_Rep3 896.4425885352 896.44203496793 64.089 1 -0.7171699661796057 0.2161322902063643 1.0 ['ENST00000349995.9_1_13:46039340-46050363:+|nuORF'] 100371 17814 SLNKAVPVSV True PC9_epitope_Rep3 1012.5916952970399 1012.59058993586 73.718 2 -0.7172005712149295 0.2161322902063643 1.0 ['ENSG00000187742|ENST00000375807|SECISBP2', 'nc|ENSG00000187742|Q96T21-2|SECISBP2', 'nc|ENSG00000187742|Q96T21-3|SECISBP2'] 34899 8350 GQVQVLKV True PC9_epitope_Rep2 869.5334521449299 869.53234993586 37.488 2 -0.7172242821314091 0.2161322902063643 1.0 ['KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion', 'ENSG00000086200|ENST00000325324|IPO11', 'nc|ENSG00000086200|Q9UI26-2|IPO11'] 43082 8865 IGKVVVQVLAE True PC9_epitope_Rep4 1153.7070594024497 1153.7054249037901 41.63 3 -0.7172442624169124 0.2161322902063643 1.0 ['ENSG00000169710|ENST00000306749|FASN'] 10231 13301 CFIRCNEAGDI True PC9_epitope_Rep5 1239.5376282021898 1239.53599490379 56.173 3 -0.7172799296489227 0.2161322902063643 1.0 ['ENSG00000109536|ENST00000226798|FRG1', 'ENST00000278882.8_1_20:29623179-29633907:+|nuORF', 'ENST00000514482.1_1_4:190862182-190882061:+|nuORF'] 2307 3733 AEQAERYDDM-[Oxidation] True H1975_Epitope_Rep3 1242.48228145114 1242.4811899358601 19.429 2 -0.7173888940070806 0.2161322902063643 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000479649.1_1_22:32340737-32341614:+|nuORF', 'ENSG00000128245|ENST00000248975|YWHAH', 'ENST00000480304.5_1_8:101936173-101961117:-|nuORF', 'ENSG00000164924|ENST00000395958|YWHAZ', 'ENST00000517727.5_1_8:101936341-101962760:-|nuORF', 'ENSG00000166913|ENST00000353703|YWHAB', 'nc|ENSG00000166913|P31946-2|YWHAB', 'ENSG00000170027|ENST00000307630|YWHAG'] 52183 14386 KMERLFDLYFY True H1975_Epitope_Rep2 1523.7482725914301 1523.74716993586 60.486 2 -0.7174476052108146 0.21615917998191136 1.0 ['ENSG00000214237|ENST00000465419|MINDY4B'] 83501 6671 QDIIDFLMET True NCI_RA007_Epitope_Rep2 1223.57439055039 1223.5732899358602 30.56 2 -0.7175602000922967 0.21619870084851772 1.0 ['ENSG00000147459|ENST00000276440|DOCK5', 'ENST00000481728.2_1_8:25209198-25222229:+|nuORF', 'ENST00000467709.6_1_8:25191660-25227073:+|nuORF'] 88734 16557 RDDCQEYTTEV True PC9_epitope_Rep5 1357.5456096032499 1357.5439649037899 68.69 3 -0.7175630676130414 0.21619870084851772 1.0 ['nc|ENSG00000145734|A6H8Y1-7|BDP1', 'nc|ENSG00000145734|A6H8Y1-6|BDP1', 'ENSG00000145734|ENST00000358731|BDP1'] 12009 12339 DIAVELLQKA True NCI_RA007_Epitope_Rep2 1098.62847472858 1098.62736993586 52.601 2 -0.7176173671302866 0.21619870084851772 1.0 ['ENSG00000115649|ENST00000360507|CNPPD1'] 54876 10553 LAGISRSATI True PC9_epitope_Rep1 987.57129420563 987.57018993586 45.482 2 -0.7176257710043518 0.21619870084851772 1.0 ['ENSG00000111266|ENST00000298573|DUSP16', 'ENSG00000184545|ENST00000397374|DUSP8'] 22675 9265 ETTEAVAPDI True H1975_Epitope_Rep2 1044.4975201286798 1044.49642993586 40.593 2 -0.717716168363779 0.21619870084851772 1.0 ['ENST00000393023.2_1_13:64385317-64385740:-|nuORF'] 44127 5663 ILNSFEHEFLS True H1975_Epitope_Rep3 1334.65066672514 1334.6495699358602 26.812 2 -0.7177211823625846 0.21619870084851772 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 110263 8924 TIFMKGLQML True PC9_epitope_Rep6 1180.6348230623198 1180.63318490379 44.302 3 -0.7178025903312708 0.21619870084851772 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1', 'ENST00000552430.5_1_12:51442859-51449674:+|nuORF', 'ENST00000547877.5_1_12:51442859-51453215:+|nuORF'] 78649 3612 PDYKQWKIE True H1975_Epitope_Rep3 1205.6080736371698 1205.60641490379 18.911 3 -0.717850649530169 0.21619870084851772 1.0 ['ENST00000439282.1_1_1:109529720-109529831:-|nuORF'] 84004 13049 QENFLAVEA True H1975_Epitope_Rep3 1019.4923751785898 1019.49126993586 55.433 2 -0.7178712261248986 0.21619870084851772 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1', 'nc|ENSG00000129534|Q6P0N0-2|MIS18BP1'] 135795 20279 YENLKWTLERK True PC9_epitope_Rep5 1478.7881632574597 1478.78706993586 83.055 2 -0.7178872885991767 0.21619870084851772 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 134222 23903 WRRGGVCWR True PC9_epitope_Rep4 1174.5930497930597 1174.5919499358602 100.39 2 -0.7178890709958025 0.21619870084851772 1.0 ['PNMA5|p.W189Cfs*34|2|0.33|ENSG00000198883|chrX:152991032-152991032|C/-|frameshift_variant'] 34345 5746 GPSINGLASL True PC9_epitope_Rep5 927.50254593947 927.50144993586 27.095 2 -0.7179392497660024 0.2162255847600675 1.0 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 114548 8243 TSILFCSTY True H1975_Epitope_Rep2 1033.47903361357 1033.4779299358602 36.66 2 -0.7179833875529886 0.21624594981538695 1.0 ['ENSG00000179399|ENST00000377067|GPC5', 'GPC5|p.Y175*|1|0.23|ENSG00000179399|chr13:91693386-91693386|C/-|frameshift_variant'] 41826 4694 IDSNNSMTK True NCI_RA007_Epitope_Rep2 1008.4546097708801 1008.45350993586 22.884 2 -0.7179835384842899 0.21624594981538695 1.0 ['SWT1|p.K261M|1|0.52|ENSG00000116668|chr1:185174929-185174929|A/T|missense_variant'] 46481 10265 ITNYKDLR True PC9_epitope_Rep6 1021.5556441414899 1021.55454993586 50.164 2 -0.7180255517358959 0.21624594981538695 1.0 ['ENSG00000131459|ENST00000253778|GFPT2'] 32981 16732 GIVALSCWL True PC9_epitope_Rep5 960.5102741722 960.50916993586 69.367 2 -0.7180367083286465 0.21625124325627657 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 135666 9815 YEGKAIAG True PC9_epitope_Rep1 807.4126683059098 807.41156993586 42.615 2 -0.7180595463819767 0.21625124325627657 1.0 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-3|BPNT1', 'nc|ENSG00000162813|O95861-4|BPNT1', 'ENST00000548668.1_1_1:220240634-220247398:-|nuORF', 'BPNT1|p.I150F|1|0.27|ENSG00000162813|chr1:220067328-220067328|T/A|missense_variant', 'ENST00000482136.5_1_1:220240458-220263036:-|nuORF'] 140399 16282 YYEYNHDLF True PC9_epitope_Rep6 1262.5244035828598 1262.5233099358602 74.989 2 -0.7180773724580375 0.21625124325627657 1.0 ['ENSG00000151748|ENST00000324679|SAV1'] 103235 8687 SQSKNAPKIT True H1975_Epitope_Rep1 1072.58767254576 1072.58656993586 38.345 2 -0.7180958305519617 0.21625979505726342 1.0 ['SORCS3|p.E1175K|1|0.22|ENSG00000156395|chr10:105262410-105262410|G/A|missense_variant'] 127739 26456 VRKERKRHKT True NCI_RA007_Epitope_Rep1 1336.81638412432 1336.8152899358602 109.5 2 -0.7181203504122335 0.21625979505726342 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 115984 14368 TVQMSHLL True PC9_epitope_Rep1 927.4847877003499 927.48368993586 60.091 2 -0.7182382439284457 0.21633717075522874 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 81262 10594 PPPLYLTSVP True H1975_Epitope_Rep1 1082.60119735158 1082.60010993586 45.703 2 -0.7182594517564542 0.21633717075522874 1.0 ['ENST00000482818.1_1_22:29724812-29725148:-|nuORF'] 3168 5884 AGEEPPAQPP True H1975_Epitope_Rep3 991.4610750503098 991.45996993586 27.642 2 -0.7182599771557876 0.21633717075522874 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 133800 24109 WLRHRRPRYG True NCI_RA007_Epitope_Rep2 1395.77485366551 1395.77320490379 101.28 3 -0.7182990663904484 0.21633717075522874 1.0 ['ENST00000509770.1_1_5:82352905-82373233:-|nuORF'] 11485 5629 DGEEQQPPHEA True NCI_RA007_Epitope_Rep2 1235.50545904343 1235.50436993586 26.51 2 -0.7184185580436419 0.21637585510653046 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 4780 8491 ALEIHYRSHT True H1975_Epitope_Rep1 1225.62036965637 1225.61926993586 37.59 2 -0.7184333151269094 0.21637585510653046 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3'] 62561 19577 LLTQELLQG True PC9_epitope_Rep6 1013.57571087973 1013.5746099358599 87.967 2 -0.7184935394347407 0.21639946962391515 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 99227 18672 SLCIMHLLL True PC9_epitope_Rep1 1041.57149452977 1041.57038993586 76.612 2 -0.7185400002560078 0.21639946962391515 1.0 ['ENST00000250405.9_2_14:23778607-23778970:+|nuORF'] 134225 17449 WRRHCKKYWLI True PC9_epitope_Rep3 1587.8608917885897 1587.8592449037899 72.292 3 -0.7185526507691741 0.21640677966101696 1.0 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF', 'ENST00000526952.1_2_11:33789164-33793404:-|nuORF'] 106504 9920 SVVPASSYIP True H1975_Epitope_Rep2 1018.5335117145801 1018.53240993586 43.146 2 -0.7186060098754544 0.21640677966101696 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 29662 15665 FVMRTGKP True PC9_epitope_Rep3 934.5058574980999 934.5047699358599 65.401 2 -0.7186245193652672 0.21640677966101696 1.0 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF'] 14305 9706 DTDEDRYP True H1975_Epitope_Rep3 1009.39886871657 1009.39776993586 42.356 2 -0.7186296231546444 0.21640677966101696 1.0 ['ENSG00000124391|ENST00000244241|IL17C'] 12946 7745 DLNVDREEN True H1975_Epitope_Rep3 1102.4890807032998 1102.48798993586 34.773 2 -0.7186332623631121 0.21640677966101696 1.0 ['nc|ENSG00000267908|P0CG00|ZSCAN5DP'] 82861 11137 PVTVQEFMEVK True NCI_RA007_Epitope_Rep5 1305.66387426113 1305.66276993586 49.474 2 -0.7186436120091168 0.21640677966101696 1.0 ['nc|ENSG00000139436|Q14161-3|GIT2', 'ENSG00000139436|ENST00000355312|GIT2', 'ENST00000549999.1_1_12:110386630-110391055:-|nuORF', 'ENST00000551455.5_1_12:110388962-110434038:-|nuORF', 'nc|ENSG00000139436|Q14161-2|GIT2', 'nc|ENSG00000139436|Q14161-11|GIT2', 'nc|ENSG00000139436|Q14161-7|GIT2', 'nc|ENSG00000139436|Q14161-9|GIT2', 'nc|ENSG00000139436|Q14161-6|GIT2', 'nc|ENSG00000139436|Q14161-5|GIT2'] 115463 12799 TVFSYFIKYW True H1975_Epitope_Rep1 1352.6805103014399 1352.6794099358601 54.295 2 -0.7186839997432992 0.21640677966101696 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15'] 83100 15083 PYNMEKVLDKV True PC9_epitope_Rep3 1334.6904233621399 1334.68932993586 63.155 2 -0.7187756937411777 0.2164303900447444 1.0 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF'] 13254 11972 DLVLLGKQA True H1975_Epitope_Rep3 955.5702315764698 955.56912993586 51.208 2 -0.7187782602569257 0.2164303900447444 1.0 ['nc|ENSG00000105379|P38117-2|ETFB', 'ENSG00000105379|ENST00000309244|ETFB', 'ETFB|p.D158Tfs*3|1|0.3|ENSG00000105379|chr19:51347025-51347025|C/-|frameshift_variant'] 67985 14001 LTLSEICEFI True PC9_epitope_Rep1 1166.58931233854 1166.58820993586 58.692 2 -0.7188076498153646 0.21643241288923035 1.0 ['ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000186564|ENST00000334793|FOXD2'] 65522 7821 LSFYLLKWLDP True NCI_RA007_Epitope_Rep1 1393.7645742785699 1393.76346993586 34.414 2 -0.7188194740881556 0.21643241288923035 1.0 ['nc|ENSG00000119402|Q9UKT8-2|FBXW2', 'ENSG00000119402|ENST00000608872|FBXW2'] 88712 24737 RCRRRRRRRRL True H1975_Epitope_Rep1 1639.0138126579398 1639.01215490379 102.47 3 -0.7188260067499438 0.21643241288923035 1.0 ['ENST00000550735.6_1_12:112280040-112280175:+|nuORF'] 17128 17362 EGTLSVEKL True PC9_epitope_Rep3 974.52842633414 974.5273299358599 71.954 2 -0.7188322800546084 0.21643241288923035 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 15306 8541 EAIQDRIL True H1975_Epitope_Rep3 956.5290950404799 956.52798993586 37.841 2 -0.718857513602337 0.2164527597011328 1.0 ['nc|ENSG00000000460|Q9NSG2-3|FIRRM', 'nc|ENSG00000000460|Q9NSG2-2|FIRRM', 'ENSG00000000460|ENST00000359326|C1orf112', 'ENST00000498289.5_1_1:169773308-169819597:+|nuORF'] 48282 14630 KDLEIEQWHKK True H1975_Epitope_Rep1 1452.77251319332 1452.7714099358602 61.484 2 -0.7189408598565791 0.2164527597011328 1.0 ['nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENSG00000101745|ENST00000262126|ANKRD12'] 10735 9751 CVSGHPTMTQY True H1975_Epitope_Rep2 1222.51107910118 1222.5099899358602 42.496 2 -0.7189446324481673 0.2164527597011328 1.0 ['nc|ENSG00000145088|Q96CJ1-2|EAF2', 'ENSG00000145088|ENST00000273668|EAF2'] 105130 9452 STLPKSLSL True PC9_epitope_Rep6 944.55424715916 944.55314993586 46.593 2 -0.7189907072520886 0.21648816786419028 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 36248 6628 GVGGLRGTFF True NCI_RA007_Epitope_Rep4 1009.5345147740899 1009.53340993586 32.122 2 -0.7190140982980784 0.21648816786419028 1.0 ['ENST00000265339.6_1_5:133707203-133707263:+|nuORF'] 111316 14656 TLHSLISEL True PC9_epitope_Rep2 1011.56006081559 1011.55896993586 61.64 2 -0.7190149392385847 0.21648816786419028 1.0 ['nc|ENSG00000161013|Q9UQ53-2|MGAT4B', 'ENSG00000161013|ENST00000292591|MGAT4B', 'nc|ENSG00000161013|Q9UQ53-3|MGAT4B'] 55337 9220 LASCLEPK True PC9_epitope_Rep1 859.4473395624699 859.44624993586 40.317 2 -0.719208842093721 0.2165602217268181 1.0 ['ENST00000481206.1_1_14:105935538-105936549:+|nuORF'] 24967 13777 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 61.521 2 -0.7192341428054644 0.21658382286488928 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 117396 4805 VADGPLQEVP True H1975_Epitope_Rep3 1023.52367530687 1023.5225699358599 23.611 2 -0.7192398120626509 0.21658382286488928 1.0 ['UTP20|p.P712A|2|0.26|ENSG00000120800|chr12:101308323-101308323|C/G|missense_variant'] 43521 21971 IIDFWKMWQ True PC9_epitope_Rep2 1265.6267009067699 1265.6256099358602 89.988 2 -0.7193385606751744 0.21661595927342833 1.0 ['ENST00000370574.3_2_1:86171783-86171934:-|nuORF'] 135654 5428 YEFIYKHQQK True NCI_RA007_Epitope_Rep1 1382.6982856239 1382.69665490379 25.185 3 -0.719370345480823 0.21661595927342833 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'nc|ENSG00000173821|Q63HN8-5|RNF213', 'ENST00000573548.1_1_17:78263625-78265730:+|nuORF'] 56310 9516 LDQYLPPNGHP True H1975_Epitope_Rep2 1249.6091362663299 1249.60802993586 41.572 2 -0.7193792227464314 0.21661595927342833 1.0 ['nc|ENSG00000100146|P56693|SOX10', 'ENSG00000100146|ENST00000396884|SOX10'] 11483 5427 DGEEQQPPHEA True H1975_Epitope_Rep3 1235.50545904343 1235.50436993586 25.934 2 -0.7193912122601621 0.21661595927342833 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 68873 18942 LVEFYEEIK True H1975_Epitope_Rep1 1168.6015912743999 1168.6004899358602 78.978 2 -0.7194227455608424 0.2166546177480571 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000416281.6_1_11:67044605-67048428:+|nuORF'] 65145 14320 LSDRWAPP True H1975_Epitope_Rep2 940.4766655447999 940.47556993586 60.23 2 -0.7194546079189079 0.2166546177480571 1.0 ['ENST00000573441.1_1_17:79096339-79098810:-|nuORF'] 1497 7217 AEENLKSCLS True H1975_Epitope_Rep1 1092.5121246469998 1092.51102993586 32.771 2 -0.7195198346048828 0.21666641565130954 1.0 ['nc|ENSG00000214694|A8MVX0|ARHGEF33', 'ENSG00000214694|ENST00000409978|ARHGEF33'] 63138 7684 LNQMNVNIS True PC9_epitope_Rep5 1031.5069796969099 1031.50588993586 34.501 2 -0.7195617622879857 0.21667821319919275 1.0 ['ENST00000263826.9_1_1:243663119-243663200:-|nuORF'] 128878 13618 VSSYTETPV True H1975_Epitope_Rep2 981.46549172441 981.46438993586 57.519 2 -0.7195820546760325 0.21668875368953677 1.0 ['SLC7A14|p.I668Ffs*93|2|0.12|ENSG00000013293|chr3:170467370-170467370|G/-|frameshift_variant', 'ENSG00000013293|ENST00000231706|SLC7A14'] 63923 14410 LPWARELESRE True PC9_epitope_Rep5 1384.70991293676 1384.70880993586 60.427 2 -0.7196626722556853 0.21668875368953677 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 119867 14031 VEVSRYNKF True PC9_epitope_Rep2 1140.5927579262 1140.5916699358602 59.25 2 -0.7196849313893598 0.21668875368953677 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 81692 9009 PRTPRGGGT True PC9_epitope_Rep5 897.47806252713 897.47696993586 39.599 2 -0.7196871627787618 0.21668875368953677 1.0 ['ENSG00000123066|ENST00000281928|MED13L'] 16909 12902 EGAVRRWQLWE True H1975_Epitope_Rep3 1428.7262317072398 1428.7251299358602 54.854 2 -0.7196905899648215 0.21668875368953677 1.0 ['ENST00000203630.9_2_12:6861510-6862293:-|nuORF'] 101027 8471 SLTHYILDTR True NCI_RA007_Epitope_Rep1 1217.6404363946099 1217.6393299358601 36.949 2 -0.719703352762137 0.21668875368953677 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 34614 7189 GQIDGQEITAT True PC9_epitope_Rep5 1131.54078192299 1131.53968993586 32.617 2 -0.7198636387855197 0.21675425783426447 1.0 ['nc|ENSG00000205937|Q15287-3|RNPS1', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'ENST00000562205.1_1_16:2303967-2305746:-|nuORF'] 55363 3912 LASLTQHQKT True PC9_epitope_Rep4 1125.6142216467701 1125.61258490379 21.238 3 -0.7198950295477938 0.21675425783426447 1.0 ['nc|ENSG00000228623|P0CG24|ZNF883'] 27142 10354 FLRKNWNKL True NCI_RA007_Epitope_Rep3 1217.7033114346898 1217.70166490379 47.79 3 -0.7199040679917666 0.21675425783426447 1.0 ['ENSG00000164307|ENST00000443439|ERAP1', 'nc|ENSG00000164307|Q9NZ08-2|ERAP1'] 56099 15231 LDLLSYIRTEK True PC9_epitope_Rep3 1349.7554661468496 1349.75383490379 63.735 3 -0.7199306588042015 0.21676605228285747 1.0 ['nc|ENSG00000150627|Q8IZU2|WDR17', 'ENSG00000150627|ENST00000508596|WDR17'] 25957 7145 FGSSLVCG True NCI_RA007_Epitope_Rep1 768.3476255212 768.3470749679301 31.782 1 -0.7200656210406583 0.21680469808763742 1.0 ['ENST00000427497.3_1_17:17136120-17140292:-|nuORF'] 108473 7898 TEEQPYFRETR True H1975_Epitope_Rep2 1454.6790067313 1454.67790993586 35.326 2 -0.7200750498431736 0.21680469808763742 1.0 ['ENSG00000198740|ENST00000430262|ZNF652'] 79851 21660 PIHLPKDIL True PC9_epitope_Rep5 1044.6331661862 1044.63206993586 88.362 2 -0.7201626168269598 0.21681649124392044 1.0 ['L1MC1_dup2137|chr3:11202598-11203364:-|1.2042192408896564|0.3234029913481031|1.9|502.0|52|3|anti-sense'] 11513 24271 DGGWCWGC True PC9_epitope_Rep2 882.2788943383799 882.27778993586 98.899 2 -0.7202601878145509 0.21688524837004802 1.0 ['ENST00000593460.1_1_19:18120319-18120565:+|nuORF'] 124502 8334 VLFHLHNAR True H1975_Epitope_Rep1 1105.61449643029 1105.6133899358601 36.988 2 -0.7202738909614784 0.21688524837004802 1.0 ['nc|ENSG00000132950|Q9UJ78-1|ZMYM5', 'ENST00000467542.5_1_13:20411687-20425669:-|nuORF'] 109873 8030 THMTAIVGM-[Oxidation] True PC9_epitope_Rep4 975.4517737003499 975.45066993586 38.338 2 -0.7203722729657754 0.2169238876759768 1.0 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 9620 8161 AYFITEEVP True H1975_Epitope_Rep1 1067.51752729727 1067.51642993586 36.332 2 -0.7204016822938437 0.2169238876759768 1.0 ['HS3ST5|p.P157Q|1|0.26|ENSG00000249853|chr6:114057828-114057828|G/T|missense_variant', 'ENSG00000249853|ENST00000312719|HS3ST5'] 115329 9773 TVEALNAVHG True PC9_epitope_Rep3 1009.5192586327698 1009.51816993586 42.546 2 -0.7204522749329461 0.2169507347627078 1.0 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'nc|ENSG00000139910|P51513-2|NOVA1'] 63819 7108 LPSTELGSK True NCI_RA007_Epitope_Rep2 930.5022115863 930.50110993586 32.268 2 -0.7204940219794012 0.21695925803246108 1.0 ['ENST00000491100.5_1_3:50296445-50296607:+|nuORF'] 18093 12877 EIKVYWNAP True PC9_epitope_Rep2 1118.5760452328998 1118.57494993586 54.83 2 -0.7204984029718378 0.21695925803246108 1.0 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 58332 5582 LETTGTSLP True NCI_RA007_Epitope_Rep1 917.47057710485 917.46948993586 25.78 2 -0.7205634716650791 0.2169946251938393 1.0 ['ENSG00000136014|ENST00000258499|USP44'] 26941 20415 FLIEIMEIN True PC9_epitope_Rep3 1120.58383303528 1120.58272993586 83.78 2 -0.7205836783026007 0.2169946251938393 1.0 ['ENSG00000100209|ENST00000216027|HSCB'] 56613 12314 LDYFEKQKAE True H1975_Epitope_Rep1 1269.62411762413 1269.6230299358601 52.393 2 -0.7206246662332378 0.2169946251938393 1.0 ['ZC4H2|p.I151Sfs*36|1|0.36|ENSG00000126970|chrX:64919153-64919153|G/-|frameshift_variant', 'nc|ENSG00000126970|Q9NQZ6-3|ZC4H2', 'nc|ENSG00000126970|Q9NQZ6-5|ZC4H2', 'ENSG00000126970|ENST00000374839|ZC4H2'] 105703 12177 SVHKFFNLLKE True PC9_epitope_Rep1 1360.7503211967598 1360.74868490379 51.697 3 -0.7206471037343276 0.2170365240432387 1.0 ['RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'ITM2B-RB1|4|fusion', 'ITM2B-RB1|1|fusion'] 5835 5287 APGGFVHSA True PC9_epitope_Rep4 841.40825163181 841.40714993586 27.042 2 -0.7206624864282968 0.2170600987594845 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 61105 17214 LLCRQNGTV True PC9_epitope_Rep2 1002.52804949466 1002.52694993586 71.471 2 -0.7206850025611327 0.2170600987594845 1.0 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 55737 14128 LDDSALYLSDK True PC9_epitope_Rep5 1238.60304782638 1238.6019499358601 59.354 2 -0.7207257151828103 0.217117049303726 1.0 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 99425 11430 SLEGPEGKLK True H1975_Epitope_Rep3 1056.5815245361598 1056.5804299358601 49.083 2 -0.72077721316011 0.21714913667223654 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.V1169L|1|0.18|ENSG00000124942|chr11:62530912-62530912|C/A|missense_variant'] 62091 10127 LLNIKSPSP True PC9_epitope_Rep6 967.57023157647 967.56912993586 49.569 2 -0.7207991362403389 0.21714913667223654 1.0 ['ENST00000586616.5_1_19:1483766-1490130:-|nuORF', 'ENST00000441747.6_1_19:1482426-1490130:-|nuORF'] 63441 21833 LPGTLTLVT True PC9_epitope_Rep5 913.54843350273 913.54732993586 89.012 2 -0.720811552068594 0.21714913667223654 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF', 'ENST00000561695.1_1_16:2128976-2129273:+|nuORF'] 56583 9954 LDWARERLEQQ True NCI_RA007_Epitope_Rep1 1442.7266256300602 1442.72552993586 42.723 2 -0.7208380075687637 0.21714913667223654 1.0 ['ENSG00000100316|ENST00000216146|RPL3', 'ENST00000481985.5_1_22:39710087-39711482:-|nuORF'] 124707 6835 VLKERLDPET True H1975_Epitope_Rep3 1198.6557521055797 1198.65464993586 31.246 2 -0.7208653691411278 0.21715962971325356 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 31519 15528 GEFEGFVAV True NCI_RA007_Epitope_Rep4 953.4494477374498 953.4488949679301 67.442 1 -0.7208889956329025 0.21715962971325356 1.0 ['ENSG00000254986|ENST00000531863|DPP3', 'nc|ENSG00000254986|Q9NY33-4|DPP3', 'ENST00000526250.5_1_11:66259118-66263112:+|nuORF'] 107691 9016 TALENDSLH True PC9_epitope_Rep5 998.4668887067401 998.46578993586 39.625 2 -0.7209113672111407 0.21715962971325356 1.0 ['ENSG00000142875|ENST00000370685|PRKACB'] 117661 17467 VAITEALL True PC9_epitope_Rep3 828.4956696538799 828.49456993586 72.363 2 -0.7209197616785897 0.21715962971325356 1.0 ['GCH1|p.R198L|1|0.28|ENSG00000131979|chr14:54845801-54845801|C/A|missense_variant'] 93043 22551 RRRHRGRHL True NCI_RA007_Epitope_Rep4 1242.7394712162998 1242.73783490379 97.868 3 -0.7209479293036434 0.21715962971325356 1.0 ['ENST00000543476.5_1_12:21590648-21593357:+|nuORF'] 13211 9235 DLTGKNLHP True H1975_Epitope_Rep1 993.5243440132099 993.52324993586 40.432 2 -0.7209486355050146 0.21715962971325356 1.0 ['nc|ENSG00000145604|Q13309-2|SKP2', 'ENSG00000145604|ENST00000274255|SKP2'] 19503 5277 ELQKKAIL True NCI_RA007_Epitope_Rep3 941.5909670210498 941.58986993586 27.765 2 -0.7209948089972347 0.21720022275402237 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant'] 121079 5999 VGFWTDKEEL True PC9_epitope_Rep5 1222.5870038394198 1222.58536490379 28.071 3 -0.7210205696412826 0.21720022275402237 1.0 ['ENST00000492097.5_1_3:141882642-141900319:-|nuORF', 'nc|ENSG00000175066|Q6ZS86-3|GK5', 'ENSG00000175066|ENST00000392993|GK5'] 57638 7221 LELTYEHF True PC9_epitope_Rep3 1050.5022115863 1050.50110993586 32.786 2 -0.721021776392989 0.21720022275402237 1.0 ['ENSG00000126814|ENST00000261249|TRMT5'] 58028 13720 LERGFIYV True PC9_epitope_Rep5 995.5440168286299 995.54290993586 57.8 2 -0.7210432290778753 0.21720022275402237 1.0 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 128024 24364 VRRGKKRVK True NCI_RA007_Epitope_Rep2 1125.75707834305 1125.75657496793 102.33 1 -0.7210700582835585 0.21720022275402237 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 81697 20565 PRVKKCLIC True NCI_RA007_Epitope_Rep2 1058.60927702082 1058.6081699358601 85.066 2 -0.7210738358746421 0.21720022275402237 1.0 ['ENSG00000101752|ENST00000261537|MIB1'] 106710 3349 SYCFKEKKCKK True NCI_RA007_Epitope_Rep1 1390.7101132608998 1390.70845490379 16.919 3 -0.7211254852441975 0.21722705517594293 1.0 ['nc|ENSG00000196159|Q6V0I7-2|FAT4'] 103230 19895 SQRWRLQLRRR True NCI_RA007_Epitope_Rep3 1553.9127441206497 1553.9110949037902 86.714 3 -0.721217633388959 0.21726239747159304 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 96059 5926 SEAQELASP True H1975_Epitope_Rep2 930.4294405688598 930.42834993586 27.779 2 -0.7212206797813542 0.21726239747159304 1.0 ['ENST00000326035.6_1_5:43192469-43245235:+|nuORF', 'ENST00000509362.5_1_5:43192436-43240395:+|nuORF'] 112955 10374 TPSATAVPP True H1975_Epitope_Rep2 839.4388830537499 839.43833496793 44.914 1 -0.7212353548392262 0.21726239747159304 1.0 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 128077 22117 VRRLPGGG True PC9_epitope_Rep6 810.4824196315798 810.48132993586 98.015 2 -0.7212502901388759 0.21727090764067603 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 60791 17897 LKGLRMRAF True NCI_RA007_Epitope_Rep5 1090.64335403042 1090.64224993586 75.635 2 -0.7212755434856039 0.21727090764067603 1.0 ['ENST00000555122.1_1_14:105422938-105423841:-|nuORF'] 107566 8717 TAEEAEKNP True H1975_Epitope_Rep1 987.4509042894299 987.44980993586 38.458 2 -0.721298537590331 0.21729119638826186 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000115155|Q9HC10-5|OTOF', 'nc|ENSG00000115155|Q9HC10-2|OTOF', 'ENSG00000214814|ENST00000522917|FER1L6'] 18027 12573 EIIEDLSYMVR True NCI_RA007_Epitope_Rep1 1366.68025260126 1366.67914993586 52.886 2 -0.7213158492988513 0.21729119638826186 1.0 ['ENSG00000092847|ENST00000373204|AGO1'] 90181 13103 RHGQEHVEVY True NCI_RA007_Epitope_Rep3 1252.59488318452 1252.59378993586 58.821 2 -0.7213598084303283 0.21729119638826186 1.0 ['nc|ENSG00000184470|Q9NNW7-4|TXNRD2', 'nc|ENSG00000184470|Q9NNW7-3|TXNRD2', 'ENST00000494454.5_1_22:19864636-19903590:-|nuORF', 'ENST00000400518.5_2_22:19864636-19919892:-|nuORF', 'nc|ENSG00000184470|Q9NNW7-2|TXNRD2', 'ENST00000400525.6_1_22:19864636-19929326:-|nuORF', 'ENSG00000184470|ENST00000400521|TXNRD2', 'ENST00000462330.5_1_22:19864636-19868612:-|nuORF', 'ENST00000462843.2_1_22:19864636-19868414:-|nuORF', 'ENST00000495655.2_1_22:19864636-19868294:-|nuORF', 'ENST00000485358.5_1_22:19864636-19868612:-|nuORF', 'ENST00000487165.5_1_22:19864636-19870997:-|nuORF'] 63456 16779 LPGVSLVSG True PC9_epitope_Rep4 827.47526856247 827.47472496793 72.509 1 -0.7213670600185655 0.21730297512452784 1.0 ['ENST00000597852.5_1_19:49838763-49839342:+|nuORF'] 5084 14461 ALLQETAY True PC9_epitope_Rep1 907.46509780159 907.46400993586 60.447 2 -0.7214078782274482 0.21732653153356507 1.0 ['nc|ENSG00000133103|Q9Y2V7-2|COG6', 'ENSG00000133103|ENST00000455146|COG6'] 81285 16410 PPQDLSVHLW True PC9_epitope_Rep4 1190.60840799034 1190.60730993586 71.082 2 -0.7214203111946013 0.21732653153356507 1.0 ['ENSG00000141968|ENST00000602142|VAV1', 'nc|ENSG00000141968|P15498-2|VAV1'] 34133 5477 GPAVGDAPAP True H1975_Epitope_Rep3 850.4184819623399 850.41738993586 26.12 2 -0.7215449542641966 0.2173533572094983 1.0 ['ENSG00000105514|ENST00000222120|RAB3D'] 88458 5573 QYVQENGRI True NCI_RA007_Epitope_Rep4 1105.55162139021 1105.5505299358601 28.037 2 -0.7215993521882854 0.21739522985478896 1.0 ['ENST00000247843.6_1_12:69753721-69753781:+|nuORF'] 66024 6858 LSMMKYYCECV True NCI_RA007_Epitope_Rep1 1368.5586235405601 1368.5569649037902 30.68 3 -0.7216639593725823 0.2174187820696089 1.0 ['CARNMT1|p.Y398C|1|0.28|ENSG00000156017|chr9:74983804-74983804|T/C|missense_variant'] 58274 15797 LETELSPST True PC9_epitope_Rep5 975.47605640811 975.47494993586 65.751 2 -0.7216670578812554 0.2174187820696089 1.0 ['ENST00000608609.1_1_2:97477994-97479367:-|nuORF'] 80344 8350 PLGDNTGAL True PC9_epitope_Rep1 856.42904664604 856.4279499358599 36.952 2 -0.721743973162985 0.21742728599587716 1.0 ['nc|ENSG00000105639|P52333-2|JAK3', 'ENSG00000105639|ENST00000458235|JAK3'] 99403 11159 SLEDVVID True NCI_RA007_Epitope_Rep3 888.44402800384 888.44292993586 50.999 2 -0.7217453895797992 0.21742728599587716 1.0 ['ENSG00000111261|ENST00000535902|MANSC1'] 23812 11661 EYLGKEEYL True NCI_RA007_Epitope_Rep3 1142.54955570154 1142.5484499358602 52.987 2 -0.7217862905522159 0.2174325178297373 1.0 ['nc|ENSG00000165837|Q5W0A0-2|ERICH6B', 'ENSG00000165837|ENST00000298738|ERICH6B'] 111068 8683 TLDWMFWYS True H1975_Epitope_Rep3 1247.53213181559 1247.53102993586 38.398 2 -0.7218171231609192 0.2174325178297373 1.0 ['NPR1|p.R636W|1|0.35|ENSG00000169418|chr1:153687058-153687058|C/T|missense_variant'] 85424 18277 QLERRRGY True PC9_epitope_Rep1 1076.5839245779998 1076.5828299358602 75.091 2 -0.7218682377743939 0.2174325178297373 1.0 ['ENST00000528536.1_1_11:407254-407829:-|nuORF', 'ENST00000527295.5_1_11:407027-408122:-|nuORF', 'ENSG00000185187|ENST00000431843|SIGIRR', 'nc|ENSG00000185187|Q6IA17-2|SIGIRR'] 120000 15902 VFATDDGF True PC9_epitope_Rep5 870.3759484440199 870.37484993586 66.157 2 -0.7218996822003108 0.217451481871521 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF'] 125566 10235 VLYNRISHPQK True NCI_RA007_Epitope_Rep1 1353.7517181790902 1353.7506299358602 43.823 2 -0.7219081293993532 0.217451481871521 1.0 ['TNNT1|p.A261P|1|0.59|ENSG00000105048|chr19:55133897-55133897|C/G|missense_variant'] 100965 10854 SLSSPRRNHET True NCI_RA007_Epitope_Rep2 1282.6378106256598 1282.6367099358602 46.824 2 -0.7219420820673423 0.217451481871521 1.0 ['nc|ENSG00000175779|Q8NAA6|LINC02694'] 69534 8241 LVTAQRPPDP True H1975_Epitope_Rep2 1092.5927579262 1092.5916699358602 36.652 2 -0.7219922095018249 0.217451481871521 1.0 ['nc|ENSG00000173039|Q04206-2|RELA'] 59043 8627 LGAYDLRRRER True NCI_RA007_Epitope_Rep2 1403.77457888199 1403.7734899358602 38.201 2 -0.7219926669717732 0.217451481871521 1.0 ['ENSG00000172232|ENST00000233997|AZU1'] 80664 12824 PLPPVPASP True PC9_epitope_Rep1 873.4960040070499 873.49490993586 54.201 2 -0.7219943444423012 0.217451481871521 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 54966 7831 LAIAIERYITM True H1975_Epitope_Rep3 1292.7162441871599 1292.7151499358602 35.102 2 -0.7220319802805483 0.217451481871521 1.0 ['S1PR1|p.I164Gfs*81|1|0.13|ENSG00000170989|chr1:101239467-101239480|CCTGCTAATCAGCG/-|frameshift_variant', 'ENSG00000170989|ENST00000305352|S1PR1'] 135128 20824 YAPYELHGPHA True PC9_epitope_Rep3 1253.5829215184901 1253.58182993586 85.371 2 -0.722057901191641 0.217451481871521 1.0 ['ENSG00000249693|ENST00000512175|THEGL'] 124612 24570 VLHRRRRANAF True NCI_RA007_Epitope_Rep5 1394.8119674502198 1394.8108699358602 101.98 2 -0.7220968717035412 0.21749334296159228 1.0 ['nc|ENSG00000057593|P08709|F7', 'ENSG00000057593|ENST00000346342|F7'] 69827 18406 LWWWSWRWWKL True NCI_RA007_Epitope_Rep2 1731.88267277899 1731.8815699358602 76.356 2 -0.7222193221614998 0.21755024672042364 1.0 ['chr12:54282611-54283827|502|64.93|0.0|22.63|+|1|HNRNPA1,HNRNPA1|1'] 41471 12155 IAYRKAVP True PC9_epitope_Rep3 916.5494365622399 916.54832993586 51.792 2 -0.7222216196263308 0.2175587447723922 1.0 ['ENST00000573617.1_1_16:3493766-3498541:+|nuORF', 'ENST00000572169.5_2_16:3493766-3526228:+|nuORF', 'nc|ENSG00000122390|Q9H7X0-2|NAA60'] 100874 8959 SLSGIQLFDR True PC9_epitope_Rep2 1134.6033226099 1134.6022299358601 39.818 2 -0.7222382437741568 0.2175587447723922 1.0 ['ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1', 'SLC4A1|p.T798M|1|0.21|ENSG00000004939|chr17:44251507-44251507|G/A|missense_variant'] 120349 8585 VFPSIVGRPR True NCI_RA007_Epitope_Rep2 1126.6611122695397 1126.65946490379 38.037 3 -0.7223217773961284 0.21759078191281325 1.0 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 100854 6552 SLSEEMELEFR True NCI_RA007_Epitope_Rep2 1368.62313164796 1368.62149490379 30.098 3 -0.7223510321299312 0.21759078191281325 1.0 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1', 'ENSG00000117385|ENST00000296388|P3H1', 'P3H1|p.F627Lfs*4|1|0.68|ENSG00000117385|chr1:42747755-42747756|AA/-|frameshift_variant', 'ENST00000460031.5_1_1:43220834-43232642:-|nuORF', 'nc|ENSG00000117385|Q32P28-2|P3H1', 'ENST00000495874.5_1_1:43222117-43232675:-|nuORF', 'ENST00000492956.1_1_1:43227954-43232675:-|nuORF'] 101210 18676 SLVYYFYNL True PC9_epitope_Rep5 1180.5804619069997 1180.57936993586 76.858 2 -0.7223980880612426 0.21759078191281325 1.0 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13', 'ENST00000471302.2_1_1:231047214-231057243:-|nuORF'] 115085 11628 TTTRMTVQAT True NCI_RA007_Epitope_Rep4 1108.55465816532 1108.5535699358602 51.68 2 -0.7224000743687079 0.21759078191281325 1.0 ['chr11:35201195-35204512|426|13.23|0.65|4.35|+|2|CD44,CD44|1'] 127257 11334 VQKLIVYPP True H1975_Epitope_Rep1 1055.6379172134698 1055.63682993586 48.575 2 -0.7224416708934022 0.21761954183776303 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'nc|ENSG00000138468|Q9BQF6-4|SENP7'] 10124 15582 AYYQALSAER True PC9_epitope_Rep4 1170.5669371011797 1170.5658499358601 67.857 2 -0.7224446195070527 0.21761954183776303 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'ENST00000489156.1_1_6:152599163-152623219:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 13600 6135 DPRQAPMSWMP True H1975_Epitope_Rep2 1314.58491274778 1314.58380993586 28.575 2 -0.7224498974703131 0.21761954183776303 1.0 ['nc|ENSG00000290831|Q63ZY6-2|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-5|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6-6|NSUN5P2', 'nc|ENSG00000290831|Q63ZY6|NSUN5P2', 'ENST00000444583.6_1_7:72418925-72425243:-|nuORF', 'ENST00000485741.6_1_7:72418925-72423926:-|nuORF', 'ENST00000388955.8_1_7:72418925-72423926:-|nuORF'] 115683 13328 TVLAYSLFCSA True PC9_epitope_Rep3 1173.57399662757 1173.57288993586 56.299 2 -0.7224517928893641 0.21761954183776303 1.0 ['nc|ENSG00000004809|Q86VW1-2|SLC22A16', 'ENSG00000004809|ENST00000368919|SLC22A16', 'nc|ENSG00000004809|Q86VW1-3|SLC22A16'] 8768 10645 AVEFSPEEW True NCI_RA007_Epitope_Rep2 1092.4763907612798 1092.47528993586 46.006 2 -0.7224565627522729 0.21761954183776303 1.0 ['ENST00000429248.1_1_7:56707156-56718384:-|nuORF', 'ENSG00000234444|ENST00000423484|ZNF736', 'ENSG00000214652|ENST00000456806|ZNF727'] 12422 10088 DKIRNDFCNK True PC9_epitope_Rep5 1251.6030053400698 1251.60190993586 43.786 2 -0.7224905831631954 0.21763653044956158 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10', 'nc|ENSG00000160218|P48553-2|TRAPPC10'] 15283 16261 EAGVTGIRRW True PC9_epitope_Rep5 1143.61489035311 1143.61378993586 67.539 2 -0.7225045002977417 0.21763653044956158 1.0 ['RC3H2|p.R156Pfs*98|1|0.31|ENSG00000056586|chr9:122890428-122890429|-/G|frameshift_variant'] 115598 14871 TVIGQFHTL True PC9_epitope_Rep4 1014.5498304850599 1014.54872993586 65.14 2 -0.7225557851120389 0.21763653044956158 1.0 ['ENSG00000203733|ENST00000450456|GJE1'] 56892 9032 LEDPFECND True H1975_Epitope_Rep2 1080.40699087212 1080.4064749679299 39.693 1 -0.722560079421142 0.21763653044956158 1.0 ['ENST00000525473.1_1_11:71518673-71529252:-|nuORF', 'nc|ENSG00000214534|A8MWA4|ZNF705EP', 'ENSG00000215372|ENST00000400156|ZNF705G', 'ENSG00000196946|ENST00000396570|ZNF705A'] 20502 15081 EPTWADDLPAT True PC9_epitope_Rep6 1214.54553295026 1214.54389490379 70.064 3 -0.7225875649875209 0.21764175063919386 1.0 ['ENSG00000215018|ENST00000399429|COL28A1'] 41329 6036 IAKQGKAVL True NCI_RA007_Epitope_Rep4 926.5913013742198 926.59020993586 29.835 2 -0.7225920525956566 0.21764175063919386 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant'] 45910 9020 ISRNMLMV True PC9_epitope_Rep1 962.50414324594 962.50304993586 39.543 2 -0.7226162551566757 0.21764175063919386 1.0 ['ENST00000503946.1_1_5:134131747-134131804:+|nuORF'] 107660 6973 TAILTGKPV True H1975_Epitope_Rep3 898.5487678558999 898.54766993586 31.783 2 -0.7226464198774284 0.2176685566467642 1.0 ['nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-2|TMEM132B', 'ENST00000534945.2_1_12:125834026-126068624:+|nuORF'] 56586 12663 LDWFRLQVM True H1975_Epitope_Rep3 1206.6219498794999 1206.6208499358602 53.917 2 -0.7227335031955547 0.21771040125127836 1.0 ['ENST00000549451.1_1_12:54912642-54912774:+|nuORF'] 63692 19470 LPPWRPWWWNR True NCI_RA007_Epitope_Rep1 1592.8153214951597 1592.81422993586 79.891 2 -0.7227989716408465 0.21771889193009897 1.0 ['ENSG00000174276|ENST00000310597|ZNHIT2'] 111858 20377 TLRKILFEDFR True PC9_epitope_Rep5 1436.81398408248 1436.81288993586 83.416 2 -0.7228206689610951 0.21771889193009897 1.0 ['ENSG00000087263|ENST00000566157|OGFOD1'] 72811 15931 NAIGVYGILT True PC9_epitope_Rep1 1019.56514619603 1019.56404993586 66.088 2 -0.7228343302740349 0.21773065644033385 1.0 ['nc|ENSG00000179709|Q86W28-2|NLRP8', 'ENSG00000179709|ENST00000291971|NLRP8'] 115762 15837 TVLQNNVV True PC9_epitope_Rep2 885.4919812557699 885.49088993586 66.175 2 -0.7229240790312612 0.21776594784805559 1.0 ['ENSG00000205038|ENST00000378402|PKHD1L1', 'PKHD1L1|p.G3595Efs*3|1|0.42|ENSG00000205038|chr8:109498726-109498726|G/-|frameshift_variant', 'PKHD1L1|p.S3970Mfs*9|1|0.26|ENSG00000205038|chr8:109518386-109518386|G/-|frameshift_variant'] 127745 25861 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 109.6 2 -0.7229340409163484 0.21776594784805559 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 24937 13575 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 57.444 2 -0.7229341137677218 0.21776594784805559 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 86183 22068 QPSSVFWSL True PC9_epitope_Rep5 1049.51819600361 1049.5170899358602 89.912 2 -0.723000001000954 0.2177777109430217 1.0 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 7628 5351 ASLERALTE True NCI_RA007_Epitope_Rep5 988.5189242795999 988.51782993586 27.274 2 -0.7230603970693475 0.21781299810532015 1.0 ['ENSG00000171051|ENST00000304748|FPR1'] 63072 22083 LNLLEMEY True PC9_epitope_Rep1 1023.4946836777099 1023.4935899358601 89.754 2 -0.7230893042123154 0.21781299810532015 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF', 'nc|ENSG00000185246|Q86UA1-2|PRPF39', 'ENST00000554785.1_1_14:45579308-45583868:+|nuORF'] 59352 12302 LGKNEAIGRVA True PC9_epitope_Rep2 1126.64585612822 1126.64474993586 52.631 2 -0.7230893207820762 0.21781299810532015 1.0 ['nc|ENSG00000129990|O00445-2|SYT5', 'ENSG00000129990|ENST00000354308|SYT5'] 3699 5176 AGSDLQGIK True NCI_RA007_Epitope_Rep4 887.47124581119 887.47014993586 26.435 2 -0.7231002824959417 0.21783652111151208 1.0 ['ENST00000482502.1_1_2:211074898-211081183:-|nuORF', 'ENSG00000115361|ENST00000233710|ACADL'] 22356 5815 ETELYDYYYYK True NCI_RA007_Epitope_Rep1 1548.66604200576 1548.66439490379 26.673 3 -0.7231010468139716 0.21783652111151208 1.0 ['COL24A1|p.E476K|1|0.55|ENSG00000171502|chr1:86124910-86124910|C/T|missense_variant'] 34068 18470 GNRVRRAQP True H1975_Epitope_Rep2 1052.5951579680398 1052.59406993586 76.646 2 -0.7231337927843964 0.21784828208405382 1.0 ['ENSG00000196196|ENST00000354323|HRCT1'] 92641 24847 RRFLLRRA True NCI_RA007_Epitope_Rep5 1086.6886644300598 1086.6875699358602 103.06 2 -0.7231928225725097 0.21786004270291404 1.0 ['MDGA2|p.R624Efs*5|1|0.16|ENSG00000139915|chr14:46957594-46957594|A/-|frameshift_variant', 'MDGA2|p.G941Efs*2|1|0.22|ENSG00000139915|chr14:46855084-46855085|CC/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2'] 33249 10237 GLAFLPLSGGP True H1975_Epitope_Rep3 1027.5702315764697 1027.56912993586 44.424 2 -0.7232307724870033 0.21788683897935557 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 100673 10508 SLQWDRITRLE True PC9_epitope_Rep3 1415.7521121019097 1415.75047490379 45.357 3 -0.7232409581983218 0.21789204630882575 1.0 ['nc|ENSG00000168268|Q9H857-4|NT5DC2', 'nc|ENSG00000168268|Q9H857|NT5DC2', 'nc|ENSG00000168268|Q9H857-3|NT5DC2', 'ENSG00000168268|ENST00000422318|NT5DC2'] 42760 15589 IFFNVSEHDY True H1975_Epitope_Rep2 1269.56660274801 1269.56494490379 65.118 3 -0.7232705746624778 0.21789204630882575 1.0 ['nc|ENSG00000182667|Q9P121-3|NTM', 'nc|ENSG00000182667|Q9P121|NTM', 'nc|ENSG00000182667|Q9P121-4|NTM', 'ENST00000474900.5_1_11:132180116-132205037:+|nuORF', 'nc|ENSG00000182667|Q9P121-2|NTM', 'ENSG00000182667|ENST00000683400|NTM'] 55029 9321 LALCIMLI True NCI_RA007_Epitope_Rep3 888.51766805176 888.51656993586 43.764 2 -0.7232898085639722 0.21789204630882575 1.0 ['ENSG00000108576|ENST00000650711|SLC6A4', 'nc|ENSG00000108576|P31645-2|SLC6A4'] 103229 21304 SQRWRLQLRRR True H1975_Epitope_Rep2 1553.9127441206497 1553.9110949037902 88.158 3 -0.7233923240151506 0.21790380538557533 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 110444 6823 TINVVRDRPDI True H1975_Epitope_Rep3 1296.7149983171998 1296.71390993586 31.199 2 -0.7234488605858275 0.21790901163664791 1.0 ['ENST00000464511.1_1_1:29527026-29529677:-|nuORF', 'ENST00000475773.5_1_1:29520676-29529710:-|nuORF', 'ENST00000453185.5_1_1:29522511-29533334:-|nuORF', 'nc|ENSG00000116353|Q9BV79-2|MECR', 'ENSG00000116353|ENST00000263702|MECR'] 46064 10760 ISWYDNEFGYN True H1975_Epitope_Rep2 1406.5778957077 1406.57678993586 46.418 2 -0.7234537654995152 0.21790901163664791 1.0 ['ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 72795 8625 NAGKGWGLERK True NCI_RA007_Epitope_Rep2 1214.6520041378196 1214.65090993586 38.194 2 -0.7234809909808824 0.21790901163664791 1.0 ['ENST00000446880.5_1_1:155288166-155291089:-|nuORF'] 79693 11647 PHLQHLPQP True NCI_RA007_Epitope_Rep5 1065.5719629119699 1065.5708699358602 51.453 2 -0.7234899858914188 0.21791749353538997 1.0 ['ENSG00000198265|ENST00000358691|HELZ'] 46622 10218 ITTHYTIYP True PC9_epitope_Rep2 1107.5600608155898 1107.5589699358602 44.638 2 -0.7235180488430581 0.21791749353538997 1.0 ['ENSG00000171503|ENST00000511912|ETFDH', 'ENST00000436096.2_1_4:159593593-159602751:+|nuORF'] 24893 13287 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 55.683 2 -0.7236043107114084 0.21795604197360113 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 117375 19576 VAAYSASKFAL True PC9_epitope_Rep1 1126.60225998074 1126.60116993586 80.125 2 -0.7236080459518762 0.21795604197360113 1.0 ['ENSG00000117594|ENST00000367027|HSD11B1'] 17818 14465 EIAAYRKLL True PC9_epitope_Rep4 1075.63897984263 1075.6378899358601 63.551 2 -0.7236725409151329 0.21799786527157655 1.0 ['ENSG00000148798|ENST00000369849|INA', 'nc|ENSG00000104722|P07197-2|NEFM', 'nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH', 'ENSG00000104722|ENST00000221166|NEFM', 'ENSG00000277586|ENST00000610854|NEFL'] 24884 2249 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 11.838 2 -0.7236975304250682 0.21800306665464056 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 21626 7692 ERSRRRKHKRR True PC9_epitope_Rep4 1563.9406902039898 1563.93904490379 36.969 3 -0.7237024823592688 0.21800306665464056 1.0 ['ENSG00000114857|ENST00000232978|NKTR', 'ENST00000472127.1_1_3:42672642-42674322:+|nuORF'] 46590 14931 ITSDGLSFLF True PC9_epitope_Rep1 1098.55972646242 1098.5586299358602 62.256 2 -0.7237148281068826 0.21800306665464056 1.0 ['ENSG00000240563|ENST00000498273|L1TD1'] 24938 13702 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 57.942 2 -0.7238640916503597 0.21813508109977 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 24968 14422 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 64.041 2 -0.7239400549826683 0.21816378066378067 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18863 8496 ELEKEYLQEK True H1975_Epitope_Rep1 1307.6608970556697 1307.65980993586 37.609 2 -0.7239402336922314 0.21816378066378067 1.0 ['ENST00000529615.1_1_11:27359677-27371953:-|nuORF', 'ENSG00000109881|ENST00000328697|CCDC34'] 124891 17837 VLLPCFII True PC9_epitope_Rep3 916.54559705176 916.54448993586 73.806 2 -0.7239404076298351 0.21816378066378067 1.0 ['nc|ENSG00000063127|Q9GZN6-2|SLC6A16', 'ENSG00000063127|ENST00000335875|SLC6A16'] 57746 16016 LENQIYQP True H1975_Epitope_Rep2 1003.4974605590301 1003.49636993586 66.805 2 -0.7239432748186629 0.21816378066378067 1.0 ['ENST00000318887.7_1_3:88205589-88205667:+|nuORF'] 52612 7691 KQDADRPLSK True NCI_RA007_Epitope_Rep5 1156.6200353031998 1156.61892993586 36.286 2 -0.7239602139527986 0.21816378066378067 1.0 ['CEP170|p.E755Rfs*62|2|0.13|ENSG00000143702|chr1:243165697-243165697|C/-|frameshift_variant', 'ENST00000502249.6_1_4:119401524-119435218:+|nuORF', 'ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-3|CEP170', 'nc|ENSG00000143702|Q5SW79-2|CEP170'] 32198 19092 GFESLSQYG True PC9_epitope_Rep4 986.4345259493 986.43342993586 81.528 2 -0.724000500997165 0.21820559455275143 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant'] 98951 17807 SKDEGWFL True PC9_epitope_Rep3 980.4603467743199 980.45924993586 73.692 2 -0.7240254071446591 0.21821406562354392 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 14475 7811 DTSYILQLP True H1975_Epitope_Rep2 1048.54407639828 1048.5429699358601 34.992 2 -0.7240256341347426 0.21821406562354392 1.0 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G'] 130032 11524 VTPSAVTPSA True H1975_Epitope_Rep2 928.4865615221601 928.48546993586 49.385 2 -0.72404924535102 0.21822581614862022 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000570209.1_1_15:31108772-31126588:+|nuORF'] 42715 14387 IEYLYRRGRRQ True H1975_Epitope_Rep1 1508.8324281112798 1508.8313299358601 60.533 2 -0.7240728756700389 0.21825259645589407 1.0 ['ENSG00000205138|ENST00000378887|SDHAF1'] 19171 13304 ELKERFMRLYK True H1975_Epitope_Rep1 1511.8282542476297 1511.82714993586 56.279 2 -0.7241906906559888 0.21827937595815672 1.0 ['ENSG00000074935|ENST00000368662|TUBE1', 'ENST00000605457.5_1_6:112392617-112397333:-|nuORF'] 111693 11867 TLPPEKLPW True NCI_RA007_Epitope_Rep5 1079.6015317047497 1079.6004299358601 52.303 2 -0.7242413983920032 0.2182995927078167 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 121566 7453 VGKRVPRN True NCI_RA007_Epitope_Rep4 924.5617325814399 924.56062993586 35.311 2 -0.7242493014808216 0.2182995927078167 1.0 ['ENST00000262544.6_1_20:18488293-18488443:+|nuORF'] 85553 10853 QLLERFYDH True NCI_RA007_Epitope_Rep2 1219.59857158263 1219.59746993586 46.82 2 -0.7242564248409337 0.2182995927078167 1.0 ['ABCB11|p.P1132H|1|0.09|ENSG00000073734|chr2:168930681-168930681|G/T|missense_variant'] 80516 14136 PLLLSEHL True PC9_epitope_Rep5 920.5331177917601 920.53202993586 59.386 2 -0.724340927686524 0.21835314627511684 1.0 ['CEACAM20|p.P296L|1|0.34|ENSG00000273777|chr19:44520617-44520617|G/A|missense_variant'] 111795 10130 TLRAESINERT True NCI_RA007_Epitope_Rep2 1288.67352742804 1288.67242993586 43.992 2 -0.7243638675202255 0.21835314627511684 1.0 ['nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1'] 32256 12209 GFMPVFVL True PC9_epitope_Rep6 908.4829967951999 908.48188993586 58.327 2 -0.7244478290450376 0.21839166829473558 1.0 ['ENSG00000188037|ENST00000343257|CLCN1'] 63175 10503 LNSWKRQREKE True NCI_RA007_Epitope_Rep1 1472.7848092125198 1472.78370993586 44.837 2 -0.7244577594003477 0.21839166829473558 1.0 ['ENST00000371485.7_1_10:95262987-95263041:+|nuORF'] 31981 9940 GETEKKDFRAA True NCI_RA007_Epitope_Rep2 1250.62551460646 1250.62440993586 43.291 2 -0.7244900680104289 0.21841844248745154 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant'] 99332 10280 SLDQLVQK True H1975_Epitope_Rep1 929.5181960036099 929.51708993586 44.487 2 -0.7245907396867786 0.21844521587544896 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 88025 4199 QVSRGDSRDGP True H1975_Epitope_Rep3 1172.5534122953597 1172.5523099358602 21.269 2 -0.724658884073014 0.21846870538733187 1.0 ['ENST00000357164.3_1_5:150648812-150649181:+|nuORF'] 45315 12974 ISCCAKNR True PC9_epitope_Rep1 893.42114189797 893.42004993586 54.776 2 -0.7246796948642902 0.21846870538733187 1.0 ['ENSG00000137251|ENST00000259782|TINAG'] 95159 9742 SAAELTSMEL True PC9_epitope_Rep1 1050.49032657326 1050.48922993586 42.332 2 -0.7248067588825805 0.21852224743414428 1.0 ['nc|ENSG00000183977|A8MPX8-2|PP2D1', 'nc|ENSG00000183977|A8MPX8-3|PP2D1', 'ENSG00000183977|ENST00000389050|PP2D1'] 128454 17297 VSERDKVKFTV True PC9_epitope_Rep1 1306.7245003717399 1306.72285490379 71.349 3 -0.7248173320330804 0.21852224743414428 1.0 ['nc|ENSG00000172803|Q86XE0-2|SNX32', 'ENST00000530101.5_1_11:65601488-65618753:+|nuORF', 'ENSG00000172803|ENST00000308342|SNX32', 'ENST00000531503.5_1_11:65603108-65617212:+|nuORF', 'ENST00000524729.1_1_11:65601488-65617212:+|nuORF', 'ENST00000533298.5_1_11:65601362-65617723:+|nuORF'] 72655 20705 MWRSRLVLLLP True NCI_RA007_Epitope_Rep1 1382.8220466683797 1382.8209499358602 84.763 2 -0.7248592553904544 0.21853399050309552 1.0 ['GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 78607 16902 PDSFNIPGSS True PC9_epitope_Rep5 1019.45598966987 1019.45488993586 70.028 2 -0.7249312257323632 0.21854573321913176 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 100858 8465 SLSEPLYVP True PC9_epitope_Rep2 1003.5226126777098 1003.52150993586 37.927 2 -0.7250487666370399 0.21858752817430505 1.0 ['ENSG00000115084|ENST00000245680|SLC35F5', 'nc|ENSG00000115084|Q8WV83-2|SLC35F5', 'ENST00000498768.1_1_2:114500256-114514010:-|nuORF'] 42351 4567 IELRSFEVYDP True H1975_Epitope_Rep3 1366.6768814729799 1366.67524490379 22.688 3 -0.725127508050799 0.21862932187345044 1.0 ['ENSG00000197429|ENST00000396478|IPP', 'nc|ENSG00000197429|Q9Y573-2|IPP'] 24928 1860 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 10.144 2 -0.7251459564046164 0.2186462324393359 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 63168 19575 LNSVTLLL True PC9_epitope_Rep4 871.53786881903 871.53676993586 83.419 2 -0.7251755221821794 0.2186462324393359 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 98752 17741 SISDASGLWP True PC9_epitope_Rep2 1031.4923751785898 1031.4912699358601 73.523 2 -0.7252003135001253 0.2186462324393359 1.0 ['nc|ENSG00000173826|Q9H252-1|KCNH6', 'nc|ENSG00000173826|Q9H252-2|KCNH6', 'ENSG00000173826|ENST00000314672|KCNH6'] 58819 8288 LFQTNTEL True PC9_epitope_Rep4 964.48656152216 964.48546993586 39.34 2 -0.7252160627835892 0.2186462324393359 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C'] 44267 16414 ILVHGDDFSV True PC9_epitope_Rep1 1100.55022440788 1100.54912993586 67.959 2 -0.7252397927698266 0.2186781652368575 1.0 ['ENSG00000165124|ENST00000374469|SVEP1', 'nc|ENSG00000165124|Q4LDE5-3|SVEP1'] 131445 18976 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 79.832 2 -0.7252417165503929 0.2186781652368575 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 23721 10336 EYILDKISK True PC9_epitope_Rep2 1107.6175756917098 1107.61646993586 45.084 2 -0.7252454273069393 0.2186781652368575 1.0 ['ENSG00000065308|ENST00000182527|TRAM2'] 125685 25592 VMVRCLKL True PC9_epitope_Rep2 960.5612641992399 960.56071496793 104.13 1 -0.7252543115588761 0.2186781652368575 1.0 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 139616 8292 YTRQERYRARP True NCI_RA007_Epitope_Rep1 1494.7803925384198 1494.77875490379 36.255 3 -0.7252796079694191 0.21868990384615383 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 127740 25474 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 107.58 2 -0.7253389975063957 0.21873168972821921 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 98397 6057 SIIFFRDDRYW True PC9_epitope_Rep3 1516.7462984454799 1516.7446649037902 28.348 3 -0.7254266597897333 0.2187551642804561 1.0 ['ENSG00000271447|ENST00000605424|MMP28'] 133634 25034 WKKKKKKKK True H1975_Epitope_Rep2 1228.8495817455598 1228.84848993586 102.87 2 -0.7254332387011991 0.2187551642804561 1.0 ['ENST00000433510.2_1_17:46713876-46724046:-|nuORF'] 68616 15432 LTYWPQKYWAV True PC9_epitope_Rep5 1453.73942215989 1453.73832993586 64.368 2 -0.7254874650322212 0.21877863742206866 1.0 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'nc|ENSG00000185808|P57054-3|PIGP'] 131443 18620 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 78.436 2 -0.7255338817076916 0.21877863742206866 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 12890 9190 DLLRNNRRPKK True NCI_RA007_Epitope_Rep1 1408.8375134917198 1408.83640993586 39.749 2 -0.7255521664106734 0.21878051345220748 1.0 ['ENSG00000131848|ENST00000683990|ZSCAN5A', 'ENST00000592101.1_1_19:56735938-56736358:-|nuORF', 'ENSG00000197213|ENST00000586855|ZSCAN5B', 'ENSG00000204532|ENST00000534327|ZSCAN5C', 'nc|ENSG00000267908|P0CG00|ZSCAN5DP'] 47290 21525 IYFLEYFSLH True PC9_epitope_Rep5 1330.65977485686 1330.6586699358602 87.831 2 -0.7256825748395767 0.21878051345220748 1.0 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|87|2|anti-sense'] 31286 6429 GDVDVPKT True H1975_Epitope_Rep3 829.41814760917 829.4175949679301 29.705 1 -0.7257069640933524 0.21878051345220748 1.0 ['ENSG00000167914|ENST00000301659|GSDMA'] 15662 14268 ECDDCDSC True PC9_epitope_Rep6 888.1935696015601 888.19246993586 66.773 2 -0.7257126185025307 0.21878051345220748 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 74327 13113 NILWAWFIFWW True NCI_RA007_Epitope_Rep1 1580.7968774663598 1580.79578993586 55.002 2 -0.725846360648642 0.21880398371663337 1.0 ['ENSG00000213088|ENST00000368122|ACKR1', 'nc|ENSG00000213088|Q16570-2|ACKR1'] 93539 17258 RSPRGILG True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 73.157 2 -0.7258931643914195 0.21880398371663337 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 42764 7812 IFGGVMEREWV True H1975_Epitope_Rep3 1321.6488929033299 1321.6477899358601 35.032 2 -0.7259455711983926 0.21884434564489239 1.0 ['HERVH-int_dup1969|chr4:182818108-182818486:+|1.0432438340265249|0.2118301363735582|2.3|404.0|12|1|anti-sense'] 85140 20463 QITTVVLPTL True PC9_epitope_Rep3 1083.6539612004299 1083.65286993586 83.968 2 -0.7259642805208222 0.21884434564489239 1.0 ['ENSG00000166002|ENST00000298966|SMCO4'] 109269 7092 TGATVQSVP True PC9_epitope_Rep2 858.44469671018 858.44358993586 32.676 2 -0.725966189344435 0.21884434564489239 1.0 ['nc|ENSG00000072134|O95208-5|EPN2', 'nc|ENSG00000072134|O95208-3|EPN2', 'nc|ENSG00000072134|O95208-2|EPN2', 'ENSG00000072134|ENST00000314728|EPN2'] 29075 16062 FTPSWFCLP True H1975_Epitope_Rep2 1096.50518879176 1096.50408993586 66.986 2 -0.7259800430909372 0.21884434564489239 1.0 ['nc|ENSG00000156299|Q13009-2|TIAM1', 'ENSG00000156299|ENST00000541036|TIAM1'] 80779 8418 PLSPHASGSL True PC9_epitope_Rep1 964.4977949122 964.49668993586 37.215 2 -0.7259902522768422 0.21884434564489239 1.0 ['ENSG00000170689|ENST00000311177|HOXB9'] 16796 13876 EFISLQLEDS True H1975_Epitope_Rep1 1179.56593404167 1179.5648299358602 58.523 2 -0.7260064678775654 0.21884434564489239 1.0 ['ENST00000466876.1_1_3:195006441-195012466:-|nuORF'] 46097 8345 ITAAINKEFSN True H1975_Epitope_Rep2 1206.6244519773 1206.62334993586 37.051 2 -0.7260309320460911 0.21885466260156497 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 52242 13730 KNKEQVRH True PC9_epitope_Rep2 1037.57302554113 1037.57192993586 58.101 2 -0.7260526282778432 0.21885466260156497 1.0 ['ENSG00000007545|ENST00000397412|CRAMP1'] 44128 6196 ILNSFEHEFLS True NCI_RA007_Epitope_Rep2 1334.65066672514 1334.6495699358602 28.709 2 -0.7261073717055103 0.21885466260156497 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 93538 16993 RSPRGILG True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 72.123 2 -0.726109567523688 0.21885466260156497 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 1691 9441 AEGPNRLLYKD True H1975_Epitope_Rep3 1274.66190011518 1274.66080993586 41.316 2 -0.72612440220242 0.21885466260156497 1.0 ['ENSG00000176454|ENST00000314891|LPCAT4', 'ENST00000563748.5_1_15:34651330-34651973:-|nuORF'] 100828 5020 SLRYHLERHHK True NCI_RA007_Epitope_Rep4 1474.7905632993 1474.78891490379 25.795 3 -0.7261549382598367 0.21885466260156497 1.0 ['ENSG00000171940|ENST00000371471|ZNF217'] 134050 18592 WQGRRRASRRL True NCI_RA007_Epitope_Rep5 1440.82868014352 1440.82758993586 78.33 2 -0.7261716140240343 0.21885982038266302 1.0 ['TUT1|p.R782S|1|0.18|ENSG00000149016|chr11:62575375-62575375|G/T|missense_variant'] 115943 11125 TVPQPSWL True PC9_epitope_Rep6 926.48616759934 926.48506993586 53.731 2 -0.7261735169243729 0.21885982038266302 1.0 ['ENST00000530220.1_1_19:10461512-10463916:-|nuORF'] 93537 16902 RSPRGILG True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 71.77 2 -0.7261834459624605 0.21885982038266302 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 57661 15815 LEMEPYGCSI True PC9_epitope_Rep2 1140.48313301784 1140.48202993586 66.092 2 -0.7262511435596651 0.21891331771490358 1.0 ['ENSG00000198105|ENST00000395867|ZNF248'] 62999 6896 LNFC[Carbamidomethyl]FKERLQA True H1975_Epitope_Rep1 1424.72345510535 1424.7223499358602 31.565 2 -0.7262817190470117 0.21891331771490358 1.0 ['ENSG00000160994|ENST00000292574|CCDC105'] 112393 8003 TNEPNPVEE True NCI_RA007_Epitope_Rep5 1027.4458189089898 1027.44472993586 37.477 2 -0.7263487950130194 0.2189517945637483 1.0 ['nc|ENSG00000060718|P12107-3|COL11A1', 'ENSG00000060718|ENST00000370096|COL11A1', 'nc|ENSG00000060718|P12107-2|COL11A1', 'COL11A1|p.P641Kfs*6|2|0.18|ENSG00000060718|chr1:103004466-103004467|GG/-|frameshift_variant', 'COL11A1|p.Q665Sfs*7|1|0.39|ENSG00000060718|chr1:103003221-103003221|C/-|frameshift_variant'] 81087 10848 PPFTDCGSIFI True H1975_Epitope_Rep3 1195.5583465634297 1195.55671490379 46.808 3 -0.7263608712977435 0.2189517945637483 1.0 ['ENST00000466767.1_1_1:160518048-160520985:-|nuORF'] 131037 18982 VVLLRARPVI True PC9_epitope_Rep1 1134.76009803482 1134.7584449037902 77.8 3 -0.7263669037720397 0.2189635235992852 1.0 ['ENSG00000144668|ENST00000264741|ITGA9'] 55941 13125 LDHKREIRQWR True NCI_RA007_Epitope_Rep1 1535.84332714815 1535.8422299358601 55.048 2 -0.7264041220839611 0.21897525228255646 1.0 ['nc|ENSG00000165240|Q04656-5|ATP7A', 'ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A'] 12189 10640 DILSAQLPHMQ True H1975_Epitope_Rep1 1251.6281574587501 1251.6270699358602 45.884 2 -0.7265242510499654 0.21901701380024927 1.0 ['nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1'] 21966 12888 ESLNHLLY True PC9_epitope_Rep5 987.5025459394701 987.50144993586 54.584 2 -0.7265458916259011 0.21903717941017478 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 77789 9459 PAEAIKEHERW True PC9_epitope_Rep1 1364.68369818892 1364.68260993586 41.239 2 -0.7265837597060202 0.21903717941017478 1.0 ['ENSG00000174945|ENST00000683327|AMZ1'] 131491 18718 VVVARALRGRG True NCI_RA007_Epitope_Rep5 1152.7203584811598 1152.7192699358602 78.82 2 -0.7265902968396531 0.21903717941017478 1.0 ['ENSG00000243477|ENST00000443094|NAA80', 'nc|ENSG00000243477|Q93015-2|NAA80'] 120178 10267 VFLGRYKFT True PC9_epitope_Rep6 1129.6284151589298 1129.62676490379 50.172 3 -0.7266268487802645 0.21904561698549507 1.0 ['ENST00000531894.5_1_16:70011782-70023933:-|nuORF'] 79654 16520 PHHPMVLDL True PC9_epitope_Rep6 1057.5378859023701 1057.53678993586 75.981 2 -0.7266310805927197 0.21904561698549507 1.0 ['ENSG00000168447|ENST00000343070|SCNN1B', 'nc|ENSG00000168447|P51168-2|SCNN1B'] 134000 5013 WPRCWWPCWRR True NCI_RA007_Epitope_Rep2 1630.7550468210598 1630.7533949037902 24.123 3 -0.7266612296260131 0.2190573432033514 1.0 ['ENST00000534167.5_1_8:145168880-145169283:+|nuORF'] 78151 5779 PAPLRAAPAA True PC9_epitope_Rep6 933.5396001545298 933.53850993586 30.412 2 -0.7266979396686082 0.2190807945826639 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 80713 23238 PLQPLQVYQ True H1975_Epitope_Rep1 1084.59169529704 1084.5905899358602 96.604 2 -0.7267245546298379 0.2190807945826639 1.0 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5', 'HDAC5|p.L646Sfs*24|1|0.2|ENSG00000108840|chr17:44086686-44086686|G/-|frameshift_variant'] 16791 11022 EFHYIEEDLY True NCI_RA007_Epitope_Rep5 1356.5873977622398 1356.58630993586 49.031 2 -0.7267613675460949 0.21910424455354863 1.0 ['nc|ENSG00000066455|Q8TBA6-2|GOLGA5', 'ENSG00000066455|ENST00000163416|GOLGA5'] 24991 15382 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 66.84 2 -0.7267702829051499 0.21910424455354863 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 2345 6394 AEQEEMFRSP True H1975_Epitope_Rep3 1222.5288373402998 1222.5277499358601 29.573 2 -0.726788497355192 0.21911596901087022 1.0 ['CON__Q3T052'] 12985 7540 DLPYNTTFMP True NCI_RA007_Epitope_Rep1 1197.53761111885 1197.53650993586 33.323 2 -0.726891670035808 0.2191727347796712 1.0 ['ENSG00000104290|ENST00000240093|FZD3', 'FZD3|p.C82Vfs*62|1|0.27|ENSG00000104290|chr8:28520690-28520690|T/-|frameshift_variant'] 12505 20095 DLAEMGCGPV True PC9_epitope_Rep2 990.4150534580198 990.41394993586 82.704 2 -0.7269055690342244 0.21919288974297382 1.0 ['ENSG00000102221|ENST00000614628|JADE3'] 126855 12907 VPTKLHCPSSP True PC9_epitope_Rep6 1164.59612905448 1164.59449490379 61.179 3 -0.726919267185715 0.21919288974297382 1.0 ['nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 48506 13411 KEFLHFLTDQF True PC9_epitope_Rep1 1423.7136013348697 1423.71250993586 56.447 2 -0.7269211541022611 0.21919288974297382 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'LY75|p.E1442Kfs*4|1|0.35|ENSG00000054219|chr2:159816862-159816862|C/-|frameshift_variant', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 15788 6807 EDFWLMLWEHN True H1975_Epitope_Rep1 1518.6601858630197 1518.65908993586 31.227 2 -0.7269706110259918 0.21924965094807009 1.0 ['PTPRF|p.R1725L|1|0.3|ENSG00000142949|chr1:43620157-43620157|G/T|missense_variant'] 85873 7176 QNIEDHYRNLR True NCI_RA007_Epitope_Rep2 1456.71712357552 1456.71547490379 32.534 3 -0.7270135988314511 0.21929139768803482 1.0 ['ENST00000476474.5_1_19:12098553-12146369:+|nuORF', 'ENST00000489336.5_1_19:12098553-12114231:+|nuORF', 'ENST00000406892.6_1_19:12098553-12137060:+|nuORF', 'ENST00000495324.5_1_19:12098553-12129101:+|nuORF'] 70779 4444 MEEKPHQWSA True H1975_Epitope_Rep2 1241.54990713805 1241.5482749037901 22.205 3 -0.7270228146152788 0.21929653370963625 1.0 ['ENSG00000181315|ENST00000415922|ZNF322'] 79125 5034 PGAGPGDGPP True NCI_RA007_Epitope_Rep5 820.3715317699199 820.37042993586 26.065 2 -0.7270281244692209 0.21929653370963625 1.0 ['nc|ENSG00000188176|Q2TAL5-2|SMTNL2', 'ENSG00000188176|ENST00000389313|SMTNL2'] 93306 20522 RRRYLRRKER True NCI_RA007_Epitope_Rep5 1487.9021794369498 1487.90053490379 85.879 3 -0.727046916346913 0.21929653370963625 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 107483 13281 TAAFSLAL True PC9_epitope_Rep4 792.4381547777599 792.43704993586 58.982 2 -0.7271149270338129 0.21933827723901883 1.0 ['ENSG00000151148|ENST00000342494|UBE3B', 'UBE3B|p.N894Tfs*43|1|0.12|ENSG00000151148|chr12:109529938-109529938|A/-|frameshift_variant', 'ENST00000540230.5_1_12:109928780-109928933:+|nuORF', 'nc|ENSG00000151148|Q7Z3V4-2|UBE3B'] 42034 11079 IEDYDVIAS True PC9_epitope_Rep3 1023.4760564081099 1023.4749499358601 47.614 2 -0.7271878746901377 0.2193701402023477 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 82070 10359 PSVYNPSL True H1975_Epitope_Rep1 875.4388830537499 875.43833496793 44.794 1 -0.7271974875240611 0.2193701402023477 1.0 ['ENST00000328089.10_1_1:9427712-9428249:+|nuORF'] 30644 11890 GALESHFLK True PC9_epitope_Rep3 1000.5341804209199 1000.53308993586 50.755 2 -0.7271994928813876 0.2193701402023477 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'POU3F1|p.K351T|1|0.34|ENSG00000185668|chr1:38045692-38045692|T/G|missense_variant', 'ENSG00000184486|ENST00000328345|POU3F2', 'nc|ENSG00000184486|P20265-3|POU3F2', 'nc|ENSG00000184486|P20265-2|POU3F2', 'ENSG00000198914|ENST00000361360|POU3F3'] 2733 6309 AETTGKFEDR True NCI_RA007_Epitope_Rep3 1152.54111627616 1152.54000993586 31.819 2 -0.7272189762679666 0.2193701402023477 1.0 ['nc|ENSG00000135083|Q8IV13|CCNJL'] 13235 17231 DLTVAHLEV True PC9_epitope_Rep3 995.52876068731 995.52766993586 71.431 2 -0.7272406387432572 0.21938553439296382 1.0 ['ENSG00000171060|ENST00000304519|C8orf74'] 12794 11899 DLIMWKMLK True NCI_RA007_Epitope_Rep1 1176.63990844276 1176.63826490379 50.267 3 -0.7272408332808173 0.21938553439296382 1.0 ['ENST00000602629.1_1_2:171073857-171238605:+|nuORF'] 27618 10403 FPVLFPFN True H1975_Epitope_Rep3 979.51673945163 979.51564993586 45.072 2 -0.7272489878473604 0.21938553439296382 1.0 ['ENSG00000167306|ENST00000285039|MYO5B', 'nc|ENSG00000167306|Q9ULV0-2|MYO5B', 'nc|ENSG00000167306|Q9ULV0-3|MYO5B'] 39306 9291 HLQVLMQN True PC9_epitope_Rep5 981.50658577409 981.5054899358599 40.688 2 -0.7272741757284518 0.21938553439296382 1.0 ['PCDHB11|p.R478Tfs*63|1|0.09|ENSG00000197479|chr5:141201206-141201209|AGAG/-|frameshift_variant', 'ENSG00000197479|ENST00000354757|PCDHB11'] 95551 6131 SARTQRGGR True H1975_Epitope_Rep2 987.5322233583099 987.53112993586 28.56 2 -0.7273160093955772 0.21938553439296382 1.0 ['ENST00000374597.3_3_X:67913533-67935165:+|nuORF'] 85127 16983 QITELHLNL True PC9_epitope_Rep5 1079.59750895347 1079.59640993586 70.343 2 -0.7273728708689605 0.21938553439296382 1.0 ['LAMA2|p.Q2060L|1|0.48|ENSG00000196569|chr6:129440909-129440909|A/T|missense_variant'] 44013 18469 ILKAHFSV True PC9_epitope_Rep1 913.53853752537 913.53744993586 75.833 2 -0.7273837948027885 0.21938553439296382 1.0 ['ENST00000368194.7_1_1:157014344-157014518:-|nuORF'] 20131 11407 ENLLKSLQAPE True H1975_Epitope_Rep1 1240.66631678928 1240.66520993586 48.856 2 -0.7273971673799124 0.21938553439296382 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 47856 9762 IYTHLWENVP True NCI_RA007_Epitope_Rep2 1270.63462273818 1270.63352993586 42.592 2 -0.7274160194593784 0.21938553439296382 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B', 'ENST00000558615.5_1_15:49867204-49907386:-|nuORF', 'ENSG00000166262|ENST00000299338|FAM227B'] 128110 18798 VRRRRGAPGR True NCI_RA007_Epitope_Rep4 1179.7173387893897 1179.71624993586 81.323 2 -0.7274851372606169 0.2194422765203818 1.0 ['ENST00000306353.7_2_2:85828206-85829758:-|nuORF', 'ENST00000444380.5_1_2:85828554-85829758:-|nuORF'] 71363 14473 MIAGQVSKP True NCI_RA007_Epitope_Rep5 929.50043776449 929.49988496793 62.352 1 -0.7276161719833653 0.21945399150520045 1.0 ['nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENST00000517348.1_1_7:39125465-39413102:+|nuORF'] 65893 5202 LSLEDIHR True NCI_RA007_Epitope_Rep1 981.5243440132099 981.52324993586 24.317 2 -0.7276788630258078 0.21953415776203625 1.0 ['ENSG00000166261|ENST00000530393|ZNF202', 'nc|ENSG00000166261|O95125-2|ZNF202'] 44012 12210 ILINDRNTV True PC9_epitope_Rep2 1056.5927579262002 1056.5916699358602 52.277 2 -0.7277343948738613 0.21953415776203625 1.0 ['ENSG00000109927|ENST00000392793|TECTA'] 64466 18521 LQTLQESEVP True PC9_epitope_Rep1 1142.58191845898 1142.58082993586 76.03 2 -0.7277384219452281 0.21953415776203625 1.0 ['ENSG00000166261|ENST00000530393|ZNF202'] 56658 5969 LEAAGDKF True PC9_epitope_Rep4 849.42323298961 849.42212993586 29.906 2 -0.7277984746010313 0.21953928115855031 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 250 11012 AAGGPLYI True H1975_Epitope_Rep2 760.4119400299201 760.41139496793 47.385 1 -0.7278052413549223 0.21953928115855031 1.0 ['ENSG00000177000|ENST00000376590|MTHFR', 'nc|ENSG00000177000|P42898-2|MTHFR'] 122555 20414 VGTAQRLLQRP True PC9_epitope_Rep6 1237.7255034312498 1237.7244099358602 91.226 2 -0.7278203072868427 0.21953928115855031 1.0 ['ENSG00000167971|ENST00000343516|CASKIN1'] 74599 15637 NLDPRRSRRQY True H1975_Epitope_Rep3 1459.77564151115 1459.77454993586 65.565 2 -0.7278603743401579 0.21954769872593305 1.0 ['ENST00000261973.11_1_14:73525348-73538344:+|nuORF', 'ENST00000527432.5_1_14:73525300-73544147:+|nuORF', 'ENST00000531500.5_2_14:73525300-73544147:+|nuORF'] 67002 12216 LTAGSKYNI True PC9_epitope_Rep1 965.5181960036101 965.51708993586 51.848 2 -0.727928364170749 0.21954769872593305 1.0 ['ENSG00000127329|ENST00000334414|PTPRB', 'PTPRB|p.W1340*|1|0.13|ENSG00000127329|chr12:70559383-70559383|C/-|frameshift_variant', 'PTPRB|p.R1326Dfs*26|1|0.22|ENSG00000127329|chr12:70559428-70559428|C/-|frameshift_variant', 'nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB', 'PTPRB|p.E1160Sfs*17|2|0.15|ENSG00000127329|chr12:70562880-70562880|C/-|frameshift_variant', 'ENST00000552253.1_1_12:70986014-71031175:-|nuORF', 'ENST00000538174.6_1_12:70979073-71031175:-|nuORF'] 13453 5505 DNYNEEVADLK True NCI_RA007_Epitope_Rep2 1308.5833750109598 1308.58226993586 26.029 2 -0.7279663243870004 0.21955941054653502 1.0 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant', 'ENST00000468245.2_1_6:101296020-101315873:-|nuORF', 'nc|ENSG00000112249|Q8N3C0-4|ASCC3', 'nc|ENSG00000112249|Q8N3C0-3|ASCC3', 'ASCC3|p.P123Sfs*10|1|0.13|ENSG00000112249|chr6:100848582-100848583|-/A|frameshift_variant'] 85342 6810 QLDFFKRWRSY True NCI_RA007_Epitope_Rep2 1544.7888319638 1544.78719490379 31.105 3 -0.7279762835166538 0.21956635906669666 1.0 ['ENSG00000120332|ENST00000239462|TNN'] 20329 22943 EPFPLRLPQR True NCI_RA007_Epitope_Rep5 1251.7087907379498 1251.70714490379 95.477 3 -0.7280124967909086 0.21956635906669666 1.0 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1', 'ENST00000414990.2_3_7:143295168-143301929:+|nuORF'] 48945 5764 KEYESYSDF True NCI_RA007_Epitope_Rep2 1166.4767846840998 1166.4756899358601 27.037 2 -0.7280148822445542 0.21956635906669666 1.0 ['ENSG00000021852|ENST00000371237|C8B'] 28568 10930 FSMKLMGSL True PC9_epitope_Rep5 1012.5085599200399 1012.50746993586 47.032 2 -0.7280726199276646 0.21956635906669666 1.0 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF'] 69823 17978 LWWWSWRWWKL True H1975_Epitope_Rep1 1731.88267277899 1731.8815699358602 74.904 2 -0.7280808522404633 0.21956635906669666 1.0 ['chr12:54282611-54283827|502|64.93|0.0|22.63|+|1|HNRNPA1,HNRNPA1|1'] 134278 10528 WRRWNRFNRRR True NCI_RA007_Epitope_Rep5 1701.9301255202897 1701.9290299358602 47.13 2 -0.7280974520965328 0.21956635906669666 1.0 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 137999 6352 YQAQDVGT True PC9_epitope_Rep4 880.3926611373199 880.39156993586 31.51 2 -0.7281020585504736 0.21956635906669666 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 31435 4238 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 21.419 2 -0.7281536318821482 0.21957806920145245 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 94293 17549 RWSRRTLYVQ True PC9_epitope_Rep1 1363.74730150499 1363.7462099358602 72.295 2 -0.7281987404646652 0.21960478341110629 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 140935 17171 YYYRRRHRHER True H1975_Epitope_Rep1 1690.8665222042198 1690.8654299358602 71.499 2 -0.728225774894448 0.21961649261793303 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 116154 16382 TVTEITLI True PC9_epitope_Rep2 888.5167990212799 888.51570993586 68.26 2 -0.7282642181608057 0.21962820147339046 1.0 ['OR6M1|p.D119*|1|0.27|ENSG00000196099|chr11:123805995-123805996|-/A|frameshift_variant', 'OR6M1|p.C238Lfs*31|1|0.17|ENSG00000196099|chr11:123805637-123805638|-/A|frameshift_variant', 'ENSG00000196099|ENST00000309154|OR6M1'] 68086 4558 LTPCHGAL True PC9_epitope_Rep6 810.4058091036599 810.40470993586 24.791 2 -0.7283279525132207 0.2196666216560892 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 11952 17554 DHSRWSWRRKR True NCI_RA007_Epitope_Rep3 1568.8185093826398 1568.81740993586 77.012 2 -0.7283401163927685 0.2196666216560892 1.0 ['ENST00000496846.1_1_7:30411132-30411270:+|nuORF'] 68140 9729 LTPNQTNI True PC9_epitope_Rep5 899.4712458111901 899.47014993586 42.391 2 -0.7284112608241614 0.21972333913460962 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 114742 18354 TSVHLWPL True PC9_epitope_Rep6 951.5178020807899 951.51670993586 83.241 2 -0.7284662155109809 0.2197500487599958 1.0 ['ENST00000296755.11_1_5:71502183-71502285:+|nuORF'] 30673 9302 GALKEKYL True H1975_Epitope_Rep1 920.5331177917599 920.53202993586 40.688 2 -0.7285632246118042 0.21980346560648115 1.0 ['nc|ENSG00000142611|Q9HAZ2-2|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-3|PRDM16', 'ENSG00000142611|ENST00000270722|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-4|PRDM16'] 54147 8604 KYNDKKRKEEK True NCI_RA007_Epitope_Rep3 1464.8048759507599 1464.80323490379 40.919 3 -0.7285650696906182 0.21980346560648115 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 69822 17904 LWWWSWRWWKL True H1975_Epitope_Rep1 1731.88267277899 1731.8815699358602 74.565 2 -0.728608447593459 0.21984517522803648 1.0 ['chr12:54282611-54283827|502|64.93|0.0|22.63|+|1|HNRNPA1,HNRNPA1|1'] 44752 14540 IPSAPEYNFT True H1975_Epitope_Rep2 1137.5342399905699 1137.5331499358601 61.085 2 -0.7286154480399429 0.2198568792474909 1.0 ['ENST00000375169.7_1_X:54321071-54321176:-|nuORF'] 60551 15839 LIQDRITL True PC9_epitope_Rep5 970.58113061334 970.58002993586 65.915 2 -0.7287528632957577 0.21992529140851197 1.0 ['ENST00000477564.5_1_22:42968458-42968503:+|nuORF'] 14887 10813 DYILQHKK True H1975_Epitope_Rep3 1043.57637958607 1043.5752899358602 46.671 2 -0.7287615094353528 0.21992529140851197 1.0 ['nc|ENSG00000148219|O75129-2|ASTN2', 'nc|ENSG00000148219|O75129-3|ASTN2', 'ENSG00000148219|ENST00000313400|ASTN2', 'nc|ENSG00000148219|O75129-6|ASTN2', 'nc|ENSG00000148219|O75129-4|ASTN2'] 1755 8453 AEHDVTVKYY True H1975_Epitope_Rep3 1223.58225281215 1223.5811499358601 37.498 2 -0.7288198485336818 0.21994209681532484 1.0 ['ENSG00000146281|ENST00000275072|PM20D2'] 111870 10361 TLRMCTWK True PC9_epitope_Rep1 1037.5150422828099 1037.5139499358602 44.736 2 -0.7288473263957506 0.21994209681532484 1.0 ['ENST00000402966.1_1_22:42089941-42090169:+|nuORF'] 134608 18870 WWDIYYTLFEK True PC9_epitope_Rep6 1562.7445671099797 1562.74346993586 85.232 2 -0.7288701856520342 0.21994209681532484 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 5872 16122 APGPVLAPT True PC9_epitope_Rep3 821.4647038787699 821.46360993586 67.163 2 -0.7288726089509189 0.21994209681532484 1.0 ['nc|ENSG00000288550|Q8NAC3-4|IL17RC', 'ENST00000483582.5_1_3:9958999-9974679:+|nuORF', 'nc|ENSG00000288550|Q8NAC3-6|IL17RC', 'nc|ENSG00000288550|Q8NAC3-7|IL17RC', 'nc|ENSG00000288550|Q8NAC3-8|IL17RC', 'nc|ENSG00000288550|Q8NAC3-3|IL17RC', 'nc|ENSG00000288550|Q8NAC3-5|IL17RC', 'ENST00000451271.5_1_3:9958923-9975274:+|nuORF', 'ENSG00000163702|ENST00000403601|IL17RC', 'nc|ENSG00000288550|Q8NAC3|IL17RC'] 135401 18473 YDNLNYTL True PC9_epitope_Rep1 1014.4658260775801 1014.46472993586 75.848 2 -0.7289247329797657 0.21997719977199773 1.0 ['ENSG00000203857|ENST00000369413|HSD3B1'] 127202 5935 VQHLWWHHHWL True PC9_epitope_Rep6 1577.77927033961 1577.7776249037902 31.121 3 -0.7289962699159375 0.21997719977199773 1.0 ['ENST00000505325.1_1_5:60642967-60643258:+|nuORF'] 77909 15805 PAHVLPSAAF True PC9_epitope_Rep5 1008.5392658013599 1008.53816993586 65.783 2 -0.7290228717692027 0.21997719977199773 1.0 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 48033 19447 KALEELACKLC True PC9_epitope_Rep4 1219.6304659578698 1219.62936993586 82.917 2 -0.7290805513235545 0.21998890005549973 1.0 ['ENSG00000178971|ENST00000651323|CTC1', 'nc|ENSG00000178971|Q2NKJ3-2|CTC1'] 53715 17594 KYEDLYAFSYN True H1975_Epitope_Rep1 1411.6295969273897 1411.6284899358602 73.207 2 -0.7290984513101407 0.219994000299985 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 33965 4490 GNENHMYLEVK True NCI_RA007_Epitope_Rep2 1332.6132356706 1332.6121299358601 22.096 2 -0.7291104357179335 0.219994000299985 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant'] 37610 11387 GYSIYLILIC True PC9_epitope_Rep1 1156.620218544 1156.6191299358602 48.68 2 -0.7291194195128083 0.219994000299985 1.0 ['CD1E|p.F307Y|1|0.22|ENSG00000158488|chr1:158356513-158356513|T/A|missense_variant'] 12528 18667 DLAPRLHPRAP True PC9_epitope_Rep1 1241.69928868341 1241.69818993586 76.593 2 -0.7291466786165938 0.22000239980801536 1.0 ['ENST00000569969.5_2_16:28995606-28996332:+|nuORF'] 120847 10913 VGDPKIGAAI True PC9_epitope_Rep4 939.5389314481898 939.53782993586 49.746 2 -0.7291775494361782 0.22000239980801536 1.0 ['ENSG00000101361|ENST00000329276|NOP56'] 82382 13404 PTVQGFQW True PC9_epitope_Rep5 961.4657665079299 961.46466993586 56.575 2 -0.7291876777833847 0.22002579716231216 1.0 ['nc|ENSG00000142794|Q9H094-3|NBPF3', 'ENSG00000142794|ENST00000318249|NBPF3', 'nc|ENSG00000142794|Q9H094-5|NBPF3', 'ENST00000430580.6_1_1:16935030-16935177:-|nuORF', 'ENST00000485941.2_1_1:21771537-21772570:+|nuORF', 'ENST00000478653.6_1_1:21771537-21779909:+|nuORF', 'ENST00000429694.1_1:144598537-144604418:+|nuORF', 'ENST00000423405.1_1:144598537-144606397:+|nuORF', 'ENST00000449960.1_1:144598537-144615173:+|nuORF', 'ENST00000447534.1_1:144598537-144599905:+|nuORF', 'ENST00000421407.1_1:144598537-144606923:+|nuORF'] 47142 15412 IWKKMIKF True NCI_RA007_Epitope_Rep1 1092.6517934557999 1092.65068993586 64.028 2 -0.7291982725869922 0.22002579716231216 1.0 ['ENSG00000118156|ENST00000391901|ZNF541', 'nc|ENSG00000118156|Q9H0D2-2|ZNF541'] 67783 8994 LTHLNNRR True NCI_RA007_Epitope_Rep1 1022.5733598943 1022.5722699358599 38.987 2 -0.7292191288392943 0.2200458928866026 1.0 ['nc|ENSG00000138430|Q9NTK5-3|OLA1'] 130566 10169 VTYRSATDP True PC9_epitope_Rep3 1008.4876241513199 1008.48652993586 44.068 2 -0.7292493290572333 0.2200458928866026 1.0 ['ENSG00000163013|ENST00000520530|FBXO41'] 18776 9244 ELDRESWVREK True NCI_RA007_Epitope_Rep2 1445.72629127689 1445.72518993586 40.569 2 -0.7292604431971454 0.2200458928866026 1.0 ['ENSG00000197261|ENST00000529246|C6orf141'] 12184 22746 DILKWFYVLI True PC9_epitope_Rep1 1308.74819593844 1308.74708993586 92.299 2 -0.7292739329365433 0.22005759020966437 1.0 ['ENST00000522522.5_1_1:243375035-243388582:-|nuORF'] 63357 11068 LPERVAAAA True PC9_epitope_Rep1 896.5079656730798 896.50686993586 47.461 2 -0.7293126621200918 0.22006928718187135 1.0 ['ENST00000295156.8_1_2:17721951-17722035:+|nuORF'] 35114 19140 GRRWHRRPRRP True NCI_RA007_Epitope_Rep4 1528.8824470518798 1528.8808049037902 82.77 3 -0.7293552013814242 0.2201160715624672 1.0 ['ENST00000527920.5_1_11:65339976-65340141:+|nuORF'] 74851 5417 NLQEVRHWLEK True NCI_RA007_Epitope_Rep2 1450.7680965192196 1450.76644490379 25.69 3 -0.7293822388400907 0.2201160715624672 1.0 ['ENSG00000211448|ENST00000438257|DIO2', 'nc|ENSG00000211448|Q92813-2|DIO2', 'ENST00000422005.7_2_14:80669058-80669397:-|nuORF'] 60911 24898 LKVKFKFIL True PC9_epitope_Rep2 1134.7528873960598 1134.75124490379 101.44 3 -0.7294269092730856 0.2201160715624672 1.0 ['ENST00000508325.5_1_5:68860950-68862940:+|nuORF'] 73067 8438 NDLIFPEQK True NCI_RA007_Epitope_Rep2 1102.5658744720197 1102.56476993586 37.463 2 -0.7294690789727676 0.2201160715624672 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-4|ADGRV1', 'ENST00000504142.2_2_5:89924394-89949789:+|nuORF'] 83738 5608 QEDALPAV True PC9_epitope_Rep4 841.4181476091699 841.4175949679301 28.365 1 -0.7294807689400528 0.22012116486218997 1.0 ['ENST00000595753.5_1_19:16664282-16664408:-|nuORF'] 99462 11994 SLELGHSAA True H1975_Epitope_Rep2 883.4399456829101 883.43884993586 51.216 2 -0.7294995861249118 0.22012116486218997 1.0 ['nc|ENSG00000141506|Q8WYR1-2|PIK3R5', 'ENSG00000141506|ENST00000447110|PIK3R5', 'ENST00000578515.5_1_17:8785060-8814811:-|nuORF'] 101516 3966 SPAEPIENR True NCI_RA007_Epitope_Rep4 1011.49852318819 1011.4974299358599 21.494 2 -0.7295416143283561 0.22012116486218997 1.0 ['ENSG00000168631|ENST00000462446|MUCL3'] 107788 7564 TANCMSSQTK True NCI_RA007_Epitope_Rep1 1069.45322987189 1069.45212993586 33.414 2 -0.7296040034073076 0.2201595489443378 1.0 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 112001 9181 TLSQAIVKV True PC9_epitope_Rep5 957.58588164061 957.58478993586 40.26 2 -0.7296285008471836 0.2201595489443378 1.0 ['nc|ENSG00000163714|O15042-2|U2SURP', 'ENSG00000163714|ENST00000473835|U2SURP'] 78550 14698 PDNEEGLKIR True H1975_Epitope_Rep3 1169.6040508858898 1169.6029499358601 61.908 2 -0.7297377274475915 0.2201979307242465 1.0 ['ENSG00000114268|ENST00000232375|PFKFB4', 'ENST00000490115.5_1_3:48586091-48594264:-|nuORF', 'nc|ENSG00000114268|Q16877-2|PFKFB4', 'nc|ENSG00000114268|Q16877-3|PFKFB4', 'ENST00000496767.5_1_3:48586091-48599213:-|nuORF', 'ENST00000417753.5_1_3:48557182-48594149:-|nuORF'] 12758 11431 DLGWPEVP True PC9_epitope_Rep2 911.4388830537499 911.43778993586 49.289 2 -0.7297476841894396 0.2201979307242465 1.0 ['ENSG00000125998|ENST00000374408|FAM83C'] 109305 8020 TGFSRSSAI True PC9_epitope_Rep4 924.46649478392 924.46538993586 38.299 2 -0.729769993540044 0.22022131589995803 1.0 ['nc|ENSG00000143443|Q9BUN1-2|MENT', 'ENSG00000143443|ENST00000368926|C1orf56'] 39421 20219 HMAVAFVL True PC9_epitope_Rep5 886.4734947406599 886.47238993586 82.819 2 -0.7297948256262258 0.22022131589995803 1.0 ['ENSG00000164919|ENST00000520468|COX6C'] 139724 5056 YTWRWVWSWEW True NCI_RA007_Epitope_Rep3 1683.7622828627896 1683.76063490379 26.882 3 -0.7298082618913523 0.22023300796185508 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 3729 7704 AGSRCPER True PC9_epitope_Rep5 874.4079343619799 874.40682993586 34.576 2 -0.7298287388600069 0.22025969352565447 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 116391 16916 TWERMWMHVAK True NCI_RA007_Epitope_Rep1 1473.70094555953 1473.6998499358601 69.928 2 -0.7298578022514634 0.22029806884970612 1.0 ['ENST00000493155.1_1_1:213124884-213125846:+|nuORF', 'nc|ENSG00000143494|Q86V25-4|VASH2', 'nc|ENSG00000143494|Q86V25-5|VASH2', 'ENSG00000143494|ENST00000517399|VASH2'] 92808 23731 RRLKHFPR True NCI_RA007_Epitope_Rep4 1108.67301436592 1108.67247496793 102.9 1 -0.7298729825075193 0.22029806884970612 1.0 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 5394 8976 ALVLKQPI True NCI_RA007_Epitope_Rep5 880.57458868092 880.57348993586 41.184 2 -0.7298872517512843 0.22030975905962788 1.0 ['ENSG00000112294|ENST00000357578|ALDH5A1', 'nc|ENSG00000112294|P51649-2|ALDH5A1'] 44642 8647 IPKKNWSRLP True PC9_epitope_Rep6 1237.72952618253 1237.72789490379 43.087 3 -0.7299430230454327 0.22035143482563196 1.0 ['nc|ENSG00000096060|Q13451-2|FKBP5'] 112108 15500 TLTRFFTFHFI True PC9_epitope_Rep4 1428.7554065772 1428.7543099358602 67.546 2 -0.7300188420536103 0.2204047976011994 1.0 ['ENSG00000198727|ENST00000361789|MT-CYB'] 135584 15490 YEELLKHDTNI True NCI_RA007_Epitope_Rep2 1373.6826951294097 1373.68158993586 64.957 2 -0.7300233237889141 0.2204047976011994 1.0 ['ENST00000415495.5_1_19:42311603-42315272:+|nuORF', 'ENSG00000170956|ENST00000357396|CEACAM3'] 78531 10071 PDLLGFEEEWQ True H1975_Epitope_Rep3 1361.61394686325 1361.6128499358601 43.777 2 -0.7300476408932133 0.2204314777889387 1.0 ['ENST00000423670.1_1_1:169857987-169863175:-|nuORF'] 19169 12417 ELKENWVI True PC9_epitope_Rep2 1029.5494961318898 1029.54838993586 53.07 2 -0.7300536036428591 0.22044316512248507 1.0 ['ENST00000332843.2_1_8:120079524-120116116:+|nuORF'] 99724 6538 SLGGLHSV True PC9_epitope_Rep3 768.41300265908 768.41190993586 30.175 2 -0.7301519115791669 0.22046653873830654 1.0 ['ENSG00000205922|ENST00000382349|ONECUT3'] 87553 18757 QTLEMNLTNL True PC9_epitope_Rep4 1175.58562394043 1175.58452993586 80.231 2 -0.730184207141153 0.22046653873830654 1.0 ['nc|ENSG00000080561|Q9UJV3-2|MID2', 'ENSG00000080561|ENST00000262843|MID2'] 80692 11645 PLPVPPPTG True PC9_epitope_Rep4 873.49600400705 873.49490993586 52.551 2 -0.730220548044308 0.22049321640056968 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 31434 4139 GEDPRTYPK True H1975_Epitope_Rep3 1061.51417325233 1061.5130699358601 21.043 2 -0.7302629736259731 0.22051989326297486 1.0 ['ENST00000373998.5_1_X:70474787-70474928:-|nuORF'] 34130 4237 GPATWGSRTS True NCI_RA007_Epitope_Rep2 1018.4832074772199 1018.48210993586 21.12 2 -0.7303580358890548 0.22054656932555805 1.0 ['nc|ENSG00000005483|Q8IZD2-6|KMT2E', 'ENST00000311117.7_1_7:104753635-104753803:+|nuORF'] 101153 21117 SLVPIIDNI True PC9_epitope_Rep2 982.5698972233 982.56880993586 86.686 2 -0.7304196909471462 0.2205582538825928 1.0 ['ENST00000551898.1_1_12:47599874-47609950:-|nuORF', 'ENST00000547851.1_1_12:47600278-47609950:-|nuORF', 'ENST00000550426.5_1_12:47599871-47609950:-|nuORF'] 93545 8107 RSPRRSRVWKR True NCI_RA007_Epitope_Rep1 1482.8756303359398 1482.8745299358602 35.533 2 -0.7304305693763578 0.2205699380893133 1.0 ['ENST00000354675.10_1_6:151671234-151671276:+|nuORF'] 54766 10895 LAERKFMNPF True PC9_epitope_Rep4 1251.64341360007 1251.64230993586 49.673 2 -0.7304737790922549 0.22058999880081545 1.0 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 115465 19342 TVFSYFIKYW True PC9_epitope_Rep2 1352.6805103014399 1352.6794099358601 79.772 2 -0.7304931817748186 0.22058999880081545 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15'] 59975 3423 LHNRAEDWEVK True NCI_RA007_Epitope_Rep2 1395.6895118453501 1395.68785490379 17.971 3 -0.7305019203591798 0.22058999880081545 1.0 ['ENSG00000174799|ENST00000257287|CEP135'] 62908 13578 LMVFRHLCPP True PC9_epitope_Rep3 1211.63074074139 1211.62964993586 57.282 2 -0.7305687284908623 0.22063166099560805 1.0 ['ENST00000533077.5_1_11:67051600-67052038:+|nuORF'] 67834 12887 LTIIGHGL True PC9_epitope_Rep6 822.4963383602201 822.49524993586 61.096 2 -0.730614549301427 0.22065833258386547 1.0 ['ENSG00000064989|ENST00000392370|CALCRL'] 56765 14946 LEAQPQSTV True PC9_epitope_Rep2 971.49237517859 971.49126993586 62.75 2 -0.7306989736247433 0.220678387817198 1.0 ['PPIG-FAM117B|1|fusion', 'nc|ENSG00000138398|Q13427-2|PPIG', 'ENST00000466142.1_1_2:170488267-170492739:+|nuORF', 'PPIG|p.A682Gfs*2|1|0.15|ENSG00000138398|chr2:169637293-169637294|-/A|frameshift_variant', 'ENSG00000138398|ENST00000260970|PPIG'] 122254 19849 VGRRAAKA True PC9_epitope_Rep6 827.5089687325898 827.5084249679301 89.009 1 -0.7307122512197991 0.220678387817198 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 65527 7869 LSGAAKQP True PC9_epitope_Rep1 770.42865272322 770.42754993586 35.094 2 -0.7307262439993182 0.220678387817198 1.0 ['nc|ENSG00000164616|Q9UKT6|FBXL21P'] 35322 12253 GSVEEQLKSLK True H1975_Epitope_Rep3 1216.66631678928 1216.66520993586 52.308 2 -0.7308406128227568 0.22071342925659473 1.0 ['nc|ENSG00000130347|Q8WWV3-2|RTN4IP1', 'ENSG00000130347|ENST00000369063|RTN4IP1'] 83957 12539 QELFEVYSP True H1975_Epitope_Rep3 1110.5233409537 1110.5222499358601 53.43 2 -0.7308599483441035 0.22071342925659473 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 78230 18935 PAPVILAAP True PC9_epitope_Rep3 847.51673945163 847.51564993586 78.058 2 -0.7308859207551545 0.22071342925659473 1.0 ['ENST00000377680.3_1_9:38621281-38621927:+|nuORF', 'ENST00000484285.2_1_9:38620779-38621927:+|nuORF'] 118674 11556 VEARLRLE True PC9_epitope_Rep3 984.5716285587998 984.57052993586 49.464 2 -0.7309893525137884 0.22073678846557357 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.T492Nfs*14|1|0.09|ENSG00000155897|chr8:130937079-130937080|-/T|frameshift_variant'] 82457 16190 PVDNLVIK True PC9_epitope_Rep1 896.53311779176 896.53202993586 67.091 2 -0.7310165619362602 0.22073678846557357 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 14909 20269 DYKGDATVFFI True PC9_epitope_Rep1 1274.6183039676998 1274.61720993586 82.792 2 -0.7310246520429591 0.22073854269699966 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 78592 16785 PDSFNIPGSS True PC9_epitope_Rep1 1019.45598966987 1019.4554749679301 69.388 1 -0.7310538369466051 0.22073854269699966 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 101562 18599 SPAYYEFIGVS True PC9_epitope_Rep6 1231.57610480255 1231.5750099358602 84.185 2 -0.7310543397537275 0.22073854269699966 1.0 ['ENSG00000184497|ENST00000375353|TMEM255B'] 9208 10215 AVPHSGLNSI True PC9_epitope_Rep5 993.52434401321 993.52324993586 44.28 2 -0.7310795728271149 0.22073854269699966 1.0 ['nc|ENSG00000168004|Q96KN8-2|PLAAT5', 'nc|ENSG00000168004|Q96KN8|PLAAT5'] 35944 10889 GVARLFTKV True PC9_epitope_Rep4 989.6022004110899 989.60110993586 49.651 2 -0.731127650768128 0.22074360472957785 1.0 ['NT5E|p.E409Rfs*15|1|0.41|ENSG00000135318|chr6:85490520-85490520|G/-|frameshift_variant', 'nc|ENSG00000135318|P21589-2|NT5E', 'ENSG00000135318|ENST00000257770|NT5E'] 136116 14578 YGETWHKGGIL True PC9_epitope_Rep3 1259.6298717109098 1259.6287699358602 61.201 2 -0.7311411593209144 0.22074360472957785 1.0 ['ENSG00000085377|ENST00000652536|PREP'] 108774 4182 TEPQDRVPP True H1975_Epitope_Rep2 1037.5141732523298 1037.5130699358601 21.194 2 -0.7311419011902032 0.22074360472957785 1.0 ['SPOCD1|p.R938Gfs*122|1|0.29|ENSG00000134668|chr1:31792365-31792365|G/-|frameshift_variant', 'nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-3|SPOCD1'] 60508 21163 LINRPILVL True PC9_epitope_Rep5 1049.6961007959299 1049.69500993586 86.457 2 -0.7311528489733999 0.22076695988371223 1.0 ['ENSG00000186765|ENST00000417245|FSCN2', 'nc|ENSG00000186765|O14926-2|FSCN2'] 16513 5555 EENRDFLAA True PC9_epitope_Rep5 1063.4934378077498 1063.4923499358601 26.374 2 -0.7311795326226864 0.22076695988371223 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 121343 4394 VGHRATAL True PC9_epitope_Rep6 823.46643521427 823.46532993586 24.019 2 -0.73119927169839 0.2207786369358029 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 63781 18489 LPSERSKIL True PC9_epitope_Rep4 1041.61824439805 1041.6171499358602 79.191 2 -0.7312087141991293 0.22079031363793025 1.0 ['ENST00000441560.6_1_14:51099028-51099193:+|nuORF'] 56567 5021 LDVTDKEEERE True PC9_epitope_Rep5 1361.63105347937 1361.6293949037902 24.345 3 -0.7312446558707393 0.22080198999011 1.0 ['FANCI|p.G941del|1|0.15|ENSG00000140525|chr15:89300316-89300318|AGG/-|inframe_deletion'] 37179 6733 GVTRTEFPILF True NCI_RA007_Epitope_Rep4 1278.6972229947398 1278.69556490379 32.52 3 -0.731309842214618 0.22082865063310106 1.0 ['ENST00000394518.6_1_15:86290571-86290709:+|nuORF'] 125115 18895 VLPKLCVKLHY True NCI_RA007_Epitope_Rep3 1311.77369949363 1311.7720649037901 82.613 3 -0.7313765625342795 0.22090531773026267 1.0 ['ENST00000447425.1_1_7:22813267-22813561:-|nuORF'] 121302 5863 VGHLRVRRFWS True PC9_epitope_Rep1 1411.79492040375 1411.79326490379 27.368 3 -0.7313966402922075 0.22090531773026267 1.0 ['ENST00000441423.1_1:144301300-144301480:-|nuORF'] 17140 9612 EGVKPFEC True PC9_epitope_Rep1 907.4109540537498 907.40984993586 41.828 2 -0.7314020424576049 0.22090531773026267 1.0 ['ENSG00000066422|ENST00000312938|ZBTB11'] 80861 10957 PLVNLNYAV True NCI_RA007_Epitope_Rep3 1001.5545815123301 1001.55348993586 50.186 2 -0.7314152166824092 0.22090531773026267 1.0 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000568535.1_1_15:73028121-73029372:+|nuORF'] 78605 16883 PDSFNIPGSS True PC9_epitope_Rep5 1019.45598966987 1019.4554749679301 69.953 1 -0.7315255594733024 0.22099190890020978 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 94108 9256 RWELYDRSRDP True NCI_RA007_Epitope_Rep2 1491.7218746027897 1491.72076993586 40.612 2 -0.7315559463017368 0.2209936473690519 1.0 ['ENSG00000181523|ENST00000326317|SGSH'] 73152 10952 [Acetylation]-NEDKVGVAVGE True H1975_Epitope_Rep1 1157.5564323034298 1157.55532993586 47.092 2 -0.731580193085717 0.2209936473690519 1.0 ['ENST00000503555.5_1_4:41145057-41179590:-|nuORF'] 38349 5597 HGATVLTALG True PC9_epitope_Rep4 938.5185303567799 938.51742993586 28.314 2 -0.7316205249550344 0.2209936473690519 1.0 ['ENSG00000198125|ENST00000397326|MB'] 56914 12499 LEDQWPSPP True H1975_Epitope_Rep2 1067.49237517859 1067.4912699358601 53.169 2 -0.7316330126971823 0.2209936473690519 1.0 ['ENST00000588376.5_1_19:418930-422520:-|nuORF', 'ENSG00000129946|ENST00000264554|SHC2'] 110894 10127 TLALAMIYLK True NCI_RA007_Epitope_Rep1 1135.6675030895901 1135.6664099358602 43.403 2 -0.731648311771212 0.2210053187504682 1.0 ['ENSG00000153107|ENST00000341068|ANAPC1', 'ENST00000485325.1_1_2:112560984-112579093:-|nuORF', 'ENST00000454465.1_1_2:87355723-87398314:+|nuORF'] 93298 21114 RRRYLRRKER True H1975_Epitope_Rep2 1487.9021794369498 1487.90053490379 87.393 3 -0.7316769004514065 0.22101698978215922 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 56471 12979 LDTEAGRCVP True PC9_epitope_Rep1 1059.5018943164698 1059.5007899358602 54.796 2 -0.7316895738097368 0.22103701928118774 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 114725 5479 TSTSTSTSTIS True PC9_epitope_Rep3 1071.4931630242302 1071.4920699358602 26.149 2 -0.7316920209854293 0.22103701928118774 1.0 ['nc|ENSG00000078687|Q9HCJ0-4|TNRC6C', 'ENSG00000078687|ENST00000696270|TNRC6C', 'TNRC6C|p.K1213Sfs*58|1|0.25|ENSG00000078687|chr17:78086928-78086928|A/-|frameshift_variant'] 44784 20393 IPTPASLLQ True PC9_epitope_Rep3 938.54368247546 938.5431349679301 83.692 1 -0.7317205461081165 0.22103701928118774 1.0 ['ENST00000479835.1_1_7:75362785-75368238:-|nuORF'] 131450 21485 VVTSVKTRVS True PC9_epitope_Rep6 1074.6397081186199 1074.6386099358601 95.518 2 -0.7317683730778348 0.22107865168539326 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 30705 7211 GALRRWKENTM True NCI_RA007_Epitope_Rep2 1360.7033880876797 1360.70173490379 32.668 3 -0.7317794905736572 0.22107880585389236 1.0 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'ENST00000382162.7_1_22:32002284-32014401:+|nuORF', 'ENST00000488883.5_1_22:32000303-32002470:+|nuORF'] 127532 13392 VQVHLHWWLWW True NCI_RA007_Epitope_Rep2 1588.8091734855598 1588.8080699358602 56.733 2 -0.7317805471568919 0.22107880585389236 1.0 ['ENST00000361229.8_1_X:101976007-102003782:+|nuORF'] 37128 13759 GVTALQLP True NCI_RA007_Epitope_Rep5 797.46470387877 797.46360993586 59.605 2 -0.7317970795835175 0.22107880585389236 1.0 ['ENSG00000177045|ENST00000317578|SIX5', 'ENST00000560168.1_1_19:46269581-46272089:-|nuORF'] 111139 10646 TLERLAPRF True PC9_epitope_Rep2 1101.6294777880898 1101.62838993586 46.263 2 -0.7318201628090151 0.22107880585389236 1.0 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 15088 10204 EADAALQMI True H1975_Epitope_Rep2 960.4586325221601 960.45752993586 44.255 2 -0.7318446492080148 0.22107880585389236 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 58765 16653 LFLTPEDLDDP True H1975_Epitope_Rep2 1273.60779885365 1273.6067099358602 69.286 2 -0.7319037445257517 0.22107880585389236 1.0 ['ENSG00000129317|ENST00000344862|PUS7L', 'nc|ENSG00000129317|Q9H0K6-2|PUS7L'] 21596 25155 ERSLKAIRPYH True NCI_RA007_Epitope_Rep5 1368.76261721596 1368.7615299358602 104.26 2 -0.7319095552439904 0.22107880585389236 1.0 ['ENSG00000103148|ENST00000611875|NPRL3'] 66046 8914 LSNEEYMYAY True H1975_Epitope_Rep1 1281.52235497753 1281.5212499358602 39.191 2 -0.7319123144256211 0.22107880585389236 1.0 ['ENSG00000143390|ENST00000452671|RFX5', 'ENST00000469513.5_1_1:151316885-151317631:-|nuORF'] 125336 12782 VLSHEFVL True PC9_epitope_Rep4 942.51746772762 942.51636993586 57.028 2 -0.7319170342213343 0.22107880585389236 1.0 ['ENSG00000067167|ENST00000262213|TRAM1', 'ENST00000521049.5_1_8:71510241-71520545:-|nuORF'] 31266 12551 GDRMWQALTL True PC9_epitope_Rep1 1189.5913780272099 1189.59028993586 53.147 2 -0.7319666200607864 0.22108385009436507 1.0 ['ENSG00000047597|ENST00000378616|XK'] 112149 20370 TLVFHAGFGV True PC9_epitope_Rep2 1046.5549158654999 1046.55380993586 83.776 2 -0.732024778065043 0.22108385009436507 1.0 ['RARS1|p.R435L|1|0.39|ENSG00000113643|chr5:168506789-168506789|G/T|missense_variant'] 102071 4794 SPPRRARHGS True H1975_Epitope_Rep3 1119.6009716244698 1119.5998699358602 23.568 2 -0.7320290869697679 0.22108385009436507 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 131448 23793 VVTSVKTRVS True PC9_epitope_Rep5 1074.6397081186199 1074.6386099358601 96.5 2 -0.7321013137280676 0.22112547369051722 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 43647 11680 IILKRKRGRPP True NCI_RA007_Epitope_Rep2 1332.8830071321597 1332.88135490379 50.026 3 -0.7321306232241463 0.22113382760428368 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 95707 5563 SAYMYYLK True NCI_RA007_Epitope_Rep3 1037.4892043744499 1037.4881099358602 28.876 2 -0.7321392003143364 0.22113382760428368 1.0 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 31290 7688 GDVKTVRY True H1975_Epitope_Rep1 936.5028802926399 936.50178993586 34.539 2 -0.7321471431529802 0.22114549321510948 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 122676 12408 VGTRGTLL True PC9_epitope_Rep1 815.4865019525099 815.48540993586 52.589 2 -0.7321895403555495 0.22115715847649287 1.0 ['nc|ENSG00000183060|Q5XG99-2|LYSMD4'] 124242 10925 VLCDELGA True PC9_epitope_Rep6 818.3844049527398 818.38330993586 52.892 2 -0.7322723725808491 0.22119877785765638 1.0 ['ENST00000510760.1_9:68765775-68778925:-|nuORF', 'ENST00000604870.6_1_9:70993123-71019929:+|nuORF', 'nc|ENSG00000154330|Q15124-2|PGM5', 'ENSG00000154330|ENST00000396396|PGM5'] 107501 11553 TAALVWQQV True NCI_RA007_Epitope_Rep3 1014.5498304850599 1014.54872993586 52.574 2 -0.7323666357608984 0.22127869883632115 1.0 ['ENST00000469354.1_1_2:222284760-222285099:-|nuORF'] 90362 6543 RIIPRHLQL True NCI_RA007_Epitope_Rep5 1144.719295852 1144.7176649037901 31.83 3 -0.7323723925183249 0.22127869883632115 1.0 ['ENSG00000180573|ENST00000377791|H2AC6', 'ENSG00000181218|ENST00000689584|H2AC25', 'ENSG00000277075|ENST00000303910|H2AC8', 'ENSG00000278463|ENST00000615868|H2AC4', 'ENSG00000188486|ENST00000530167|H2AX', 'ENSG00000184270|ENST00000331128|H2AC21', 'ENSG00000164508|ENST00000297012|H2AC1', 'ENSG00000276368|ENST00000333151|H2AC14', 'ENSG00000274997|ENST00000377459|H2AC12', 'ENSG00000246705|ENST00000544848|H2AJ', 'ENSG00000278677|ENST00000359611|H2AC17', 'ENSG00000276903|ENST00000613174|H2AC16', 'ENSG00000196866|ENST00000341023|H2AC7', 'ENSG00000196787|ENST00000359193|H2AC11', 'ENSG00000196747|ENST00000358739|H2AC13', 'nc|ENSG00000246705|Q9BTM1-2|H2AJ', 'ENST00000479986.1_1_6:27858584-27860837:-|nuORF', 'ENSG00000184260|ENST00000331380|H2AC20', 'nc|ENSG00000288859|Q6FI13|H2AC18'] 11482 5313 DGEEQQPPHEA True H1975_Epitope_Rep3 1235.50545904343 1235.50436993586 25.512 2 -0.7323886204266057 0.22127869883632115 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 126060 14925 VPAVALGL True H1975_Epitope_Rep2 738.46397560278 738.4634249679301 62.562 1 -0.7324138859677095 0.2212837331895648 1.0 ['OR10H2|p.V200L|1|0.26|ENSG00000171942|chr19:15728641-15728641|G/T|missense_variant'] 31775 20137 GELNEMRTRLY True H1975_Epitope_Rep2 1380.68198393676 1380.68088993586 83.447 2 -0.7324144911591435 0.2212837331895648 1.0 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'TONSL|p.R443Afs*6|1|0.12|ENSG00000160949|chr8:144440168-144440175|GCAGCCTC/-|frameshift_variant', 'ENST00000497613.2_1_8:145668058-145668220:-|nuORF'] 106499 13134 SVVLEKAKVV True PC9_epitope_Rep4 1070.66994561774 1070.6688499358602 58.414 2 -0.7324330295340118 0.2212837331895648 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 15765 4851 EDELQVGNVP True H1975_Epitope_Rep3 1098.51931820242 1098.51822993586 23.785 2 -0.7324570789570918 0.22130042828476446 1.0 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 83636 18345 QDYQTWLDL True NCI_RA007_Epitope_Rep3 1180.540053647 1180.53894993586 80.339 2 -0.7324622099047167 0.22130042828476446 1.0 ['ENSG00000115825|ENST00000234179|PRKD3', 'ENSG00000184304|ENST00000331968|PRKD1'] 115464 13323 TVFSYFIKYW True NCI_RA007_Epitope_Rep2 1352.6805103014399 1352.6794099358601 56.461 2 -0.73246282466821 0.22130042828476446 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15'] 62017 8105 LLLSSSDP True NCI_RA007_Epitope_Rep1 830.43854870058 830.43744993586 35.525 2 -0.732466519168853 0.22130042828476446 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 58813 21648 LFQLCWEWKRR True NCI_RA007_Epitope_Rep1 1563.8132728898297 1563.81216993586 88.595 2 -0.7325222678072013 0.22130877508236 1.0 ['ENST00000444553.5_1_13:19636745-19636844:-|nuORF'] 80566 20972 PLNFIGLA True PC9_epitope_Rep3 843.4854393233499 843.48434993586 85.95 2 -0.7325294869171072 0.22130877508236 1.0 ['ENSG00000168412|ENST00000307161|MTNR1A'] 81440 5378 PQGHGFHP True NCI_RA007_Epitope_Rep5 875.4038349577099 875.40272993586 27.376 2 -0.7326695922077823 0.22136535841032629 1.0 ['ENSG00000106526|ENST00000683684|ACTR3C', 'nc|ENSG00000106526|Q9C0K3-2|ACTR3C'] 42204 9556 IEGPLCPVGP True NCI_RA007_Epitope_Rep2 980.50010341132 980.49900993586 41.784 2 -0.7327240572145785 0.22139199185409242 1.0 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 109142 7806 TFLKTSPAP True PC9_epitope_Rep5 960.5280324113198 960.52692993586 34.969 2 -0.7327789945462986 0.22140365062965126 1.0 ['TNK2|p.R99L|1|0.11|ENSG00000061938|chr3:195884972-195884972|C/A|missense_variant'] 85896 9967 QNLYNLLLMKL True NCI_RA007_Epitope_Rep2 1361.7740934164497 1361.77298993586 43.397 2 -0.7328164144205422 0.22141199371116269 1.0 ['ENST00000256367.2_1_14:71138881-71139001:+|nuORF'] 115058 12823 TTRRWKRWFKF True NCI_RA007_Epitope_Rep1 1610.8946344450194 1610.8935299358602 53.867 2 -0.7328302043195712 0.22141199371116269 1.0 ['nc|ENSG00000164542|Q8NCT3|MATCAP2'] 66877 19159 LSWKQQVL True PC9_epitope_Rep5 1000.5705659296399 1000.56946993586 78.732 2 -0.7328723142911805 0.2214236516635223 1.0 ['ENSG00000179134|ENST00000610417|SAMD4B', 'ENST00000595476.1_1_19:39869154-39871842:+|nuORF'] 3180 7369 AGELALEQGP True H1975_Epitope_Rep2 983.4923751785898 983.49182496793 33.285 1 -0.7329932988549603 0.22143530926677346 1.0 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENSG00000090565|ENST00000262305|RAB11FIP3'] 85150 10245 QIVSFYFKLFK True H1975_Epitope_Rep1 1418.7962087600197 1418.7951099358602 44.35 2 -0.7330715303072097 0.22148525228327595 1.0 ['ENSG00000111537|ENST00000229135|IFNG'] 125075 24645 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 106.58 3 -0.7331029977304273 0.22148525228327595 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 80158 9257 PKTFFKLHDV True PC9_epitope_Rep6 1230.67609362734 1230.6744449037901 45.759 3 -0.7331232365943722 0.22148525228327595 1.0 ['nc|ENSG00000070081|P80303-2|NUCB2', 'ENSG00000070081|ENST00000529010|NUCB2'] 3352 6628 AGHRLQRQW True NCI_RA007_Epitope_Rep5 1150.6108080321799 1150.60970993586 32.159 2 -0.733179712498885 0.22151188034316 1.0 ['ENST00000293190.9_1_17:72838445-72839279:-|nuORF'] 136024 23816 YFPQILRFLRP True PC9_epitope_Rep1 1448.8292402237998 1448.8286749679298 96.405 1 -0.7332099206437098 0.22152353575278477 1.0 ['nc|ENSG00000165511|Q5T742|ZNF22-AS1'] 92582 14679 RRCLRRWFHFW True NCI_RA007_Epitope_Rep1 1661.86262312409 1661.86152993586 61.15 2 -0.733228390164801 0.22153519081340858 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4'] 57776 5324 LEPAQKNLY True H1975_Epitope_Rep3 1074.57095985246 1074.5698699358602 25.551 2 -0.7332845836224442 0.22154684552504716 1.0 ['ENSG00000185947|ENST00000300870|ZNF267', 'ENST00000566541.5_3_16:31886566-31901532:+|nuORF', 'ENSG00000172006|ENST00000317243|ZNF554'] 54889 6989 LAGLYAAP True PC9_epitope_Rep2 774.42759009406 774.42648993586 32.282 2 -0.7333007353842622 0.22155518294508653 1.0 ['nc|ENSG00000166947|P16452-2|EPB42'] 114456 13892 TSELLKGIP True PC9_epitope_Rep5 956.5542471591599 956.55314993586 58.455 2 -0.7333074635479405 0.22155518294508653 1.0 ['ENST00000592485.1_1_19:10229758-10229860:-|nuORF', 'ENST00000587681.5_1_19:10229095-10230535:-|nuORF', 'ENSG00000130811|ENST00000253108|EIF3G'] 61068 5168 LLAVSHVG True NCI_RA007_Epitope_Rep4 794.46503823194 794.46394993586 26.405 2 -0.7333496001390053 0.22156683683398956 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 49094 12791 KFYRPENTHKS True NCI_RA007_Epitope_Rep1 1405.7102472899298 1405.70967496793 53.741 1 -0.7333640576752901 0.22159346088206233 1.0 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'ENST00000586588.5_1_19:10244345-10254710:-|nuORF'] 28651 10783 FSSGYGTDVSR True NCI_RA007_Epitope_Rep1 1174.5254662120199 1174.52487496793 45.939 1 -0.7333975975056017 0.22159516182150235 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 111641 14091 TLNSSTATPV True H1975_Epitope_Rep1 989.50293986229 989.5023949679301 59.368 1 -0.7334020402861542 0.22159516182150235 1.0 ['ENSG00000151690|ENST00000392328|MFSD6'] 25922 17308 FGNSWEEVV True PC9_epitope_Rep4 1065.47672511445 1065.47562993586 74.577 2 -0.7334220966812476 0.22159516182150235 1.0 ['nc|ENSG00000275395|Q9Y6R7|FCGBP', 'ENSG00000275395|ENST00000616721|FCGBP'] 85956 16725 QPELRLRRPQR True NCI_RA007_Epitope_Rep2 1447.84841252859 1447.84730993586 69.788 2 -0.7334331799138566 0.22159516182150235 1.0 ['ENST00000409331.6_1_2:85582684-85584214:+|nuORF'] 31196 18136 GDIVMTQSPL True NCI_RA007_Epitope_Rep4 1059.52704643515 1059.52647496793 78.481 1 -0.733530114715933 0.22160349679659902 1.0 ['nc|ENSG00000244116|A0A075B6P5|IGKV2-28'] 25966 7746 FGVVFSHR True NCI_RA007_Epitope_Rep1 947.49773534255 947.49662993586 34.123 2 -0.7335456282838453 0.22160349679659902 1.0 ['ENST00000488316.1_1_20:62290002-62290707:+|nuORF', 'ENST00000370018.7_1_20:62289788-62290707:+|nuORF', 'ENST00000356810.5_1_20:62289730-62290707:+|nuORF'] 93544 20021 RSPRGILG True PC9_epitope_Rep6 854.5086343794198 854.50752993586 89.678 2 -0.733574895921782 0.22162679998802504 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 51887 27277 KKRKRKKREKL True PC9_epitope_Rep1 1497.0103329035994 1497.00868490379 111.46 3 -0.7336000946619838 0.22162679998802504 1.0 ['ENSG00000065183|ENST00000349139|WDR3'] 74373 23847 NISVPGLQ True NCI_RA007_Epitope_Rep3 826.45486747106 826.45376993586 103.33 2 -0.7336190574680493 0.22165010178421746 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'LATS1|p.G535Efs*6|1|0.37|ENSG00000131023|chr6:149683485-149683485|C/-|frameshift_variant', 'nc|ENSG00000131023|O95835-2|LATS1', 'LATS1|p.D881Gfs*40|1|0.26|ENSG00000131023|chr6:149676689-149676690|-/C|frameshift_variant', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF'] 107863 5813 TASCRRRDYYD True NCI_RA007_Epitope_Rep5 1404.62044630936 1404.61934993586 29.045 2 -0.7336216127344093 0.22165010178421746 1.0 ['ENST00000479280.5_1_3:127391883-127395444:+|nuORF', 'ENST00000483857.5_1_3:127391815-127395444:+|nuORF', 'nc|ENSG00000114626|Q969K4-3|ABTB1', 'ENSG00000114626|ENST00000232744|ABTB1', 'ENST00000464431.1_1_3:127394799-127394958:+|nuORF', 'ENST00000493365.5_1_3:127391868-127394958:+|nuORF'] 115216 14516 TVAVTVMPQWR True NCI_RA007_Epitope_Rep1 1286.68052738478 1286.67942993586 60.51 2 -0.7337102742986674 0.22171830564286785 1.0 ['ENSG00000156284|ENST00000399899|CLDN8'] 87064 6077 QSEEEVKGSMK True H1975_Epitope_Rep3 1250.5812668359797 1250.58016993586 28.388 2 -0.7337706288414119 0.22171830564286785 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'CHD9|p.W1426Mfs*3|1|0.15|ENSG00000177200|chr16:53263047-53263048|-/A|frameshift_variant'] 130794 25604 VVEQLLNSVA True PC9_epitope_Rep1 1070.5971746003 1070.5960699358602 103.5 2 -0.7338466686285124 0.22172501010221948 1.0 ['ENSG00000135763|ENST00000258243|URB2'] 100085 13220 SLKSAWQTL True PC9_epitope_Rep2 1032.56039516876 1032.55928993586 56.128 2 -0.733852023746868 0.22172501010221948 1.0 ['ENSG00000107651|ENST00000369075|SEC23IP', 'nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP', 'SEC23IP|p.I875L|1|0.42|ENSG00000107651|chr10:119932183-119932183|A/C|missense_variant'] 55796 12034 LDEKDLKP True H1975_Epitope_Rep1 956.5178616504398 956.51676993586 51.298 2 -0.7338629045700007 0.22172501010221948 1.0 ['ENSG00000161082|ENST00000292672|CELF5', 'ENST00000587449.1_1_18:35109110-35145508:-|nuORF', 'nc|ENSG00000161082|Q8N6W0-2|CELF5', 'nc|ENSG00000101489|Q9BZC1-5|CELF4', 'nc|ENSG00000101489|Q9BZC1-3|CELF4', 'nc|ENSG00000101489|Q9BZC1-2|CELF4', 'nc|ENSG00000101489|Q9BZC1-4|CELF4', 'ENSG00000101489|ENST00000420428|CELF4'] 18493 9466 EKMENYQPQP True NCI_RA007_Epitope_Rep2 1262.5601374685798 1262.55904993586 41.431 2 -0.73387514759793 0.22172501010221948 1.0 ['SAGE1|p.D308Y|1|0.66|ENSG00000181433|chrX:135907357-135907357|G/T|missense_variant'] 80336 11241 PLFWAHVCL True NCI_RA007_Epitope_Rep4 1084.55280769052 1084.5517099358601 50.131 2 -0.7338927938583751 0.22172501010221948 1.0 ['L1P3_dup670|chr3:187834774-187835754:-|2.183426136896085|0.060595092738805|5.17|483.0|42|1|anti-sense'] 114267 17411 TSAESFVNV True PC9_epitope_Rep5 952.45017601344 952.44906993586 71.972 2 -0.7339025464259147 0.22172501010221948 1.0 ['nc|ENSG00000111737|Q15286-2|RAB35', 'ENSG00000111737|ENST00000229340|RAB35'] 78906 11466 PEWILHYYHWH True PC9_epitope_Rep1 1579.73606811495 1579.7344349037899 48.985 3 -0.733913235238721 0.22172501010221948 1.0 ['ENST00000295461.9_1_4:48037915-48038026:+|nuORF'] 8402 10149 ATQEVKEITC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep1 1333.6659997988797 1333.6649099358601 43.489 2 -0.7339501959721806 0.22174830512279442 1.0 ['GGCT|p.G117V|1|0.23|ENSG00000006625|chr7:30498876-30498876|C/A|missense_variant'] 112118 9557 TLTTSPRLP True H1975_Epitope_Rep3 984.5603951687599 984.55928993586 41.77 2 -0.7339770016324574 0.22174830512279442 1.0 ['ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 79446 6005 PGPLSKQGS True NCI_RA007_Epitope_Rep3 869.46068112749 869.46013496793 30.601 1 -0.7340361907883747 0.2217715987488963 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 16093 5548 EEDRQELL True NCI_RA007_Epitope_Rep3 1030.4931034545798 1030.49200993586 28.818 2 -0.7340369837526916 0.2217715987488963 1.0 ['ENSG00000069956|ENST00000261845|MAPK6'] 121131 11290 VGGGESFL True PC9_epitope_Rep2 764.37046914076 764.36936993586 48.751 2 -0.7340761593721964 0.221783245039059 1.0 ['ENST00000547095.5_1_12:62864501-62986526:+|nuORF'] 64863 10736 LSAPQKPQL True PC9_epitope_Rep5 980.5654805492 980.56438993586 46.288 2 -0.734154131952725 0.22180985588794278 1.0 ['ENST00000291294.6_1_19:47123946-47124471:-|nuORF'] 108182 9833 TDVHKQYAI True PC9_epitope_Rep2 1073.55055876105 1073.54946993586 43.159 2 -0.7342830457340292 0.2218364659403807 1.0 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 65415 12625 LSETESYNLS True PC9_epitope_Rep4 1141.51389846881 1141.51280993586 56.4 2 -0.7343718984453887 0.22188968365606201 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 136863 13168 YIWVKGRWKWK True NCI_RA007_Epitope_Rep2 1548.87177374212 1548.8701349037901 55.852 3 -0.7343838966106006 0.22188968365606201 1.0 ['ENST00000373001.3_1_1:39311726-39317298:-|nuORF'] 36731 13815 GVNLVSPGLGR True NCI_RA007_Epitope_Rep2 1067.60874234351 1067.60817496793 58.386 1 -0.7344095684612516 0.2219312553309291 1.0 ['ENST00000475470.1_1_3:9882101-9883869:-|nuORF'] 130832 6477 VVFSEDEMKKF True H1975_Epitope_Rep1 1357.6587888806896 1357.6576899358602 29.975 2 -0.7344474794173691 0.22198114619183001 1.0 ['nc|ENSG00000021826|P31327-2|CPS1', 'ENSG00000021826|ENST00000233072|CPS1', 'nc|ENSG00000021826|P31327-3|CPS1'] 49132 14256 KGGILCEE True PC9_epitope_Rep1 847.4109540537501 847.40984993586 59.66 2 -0.7344716740392231 0.22198114619183001 1.0 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.K1222Rfs*34|1|0.12|ENSG00000104237|chr8:54627546-54627547|-/GG|frameshift_variant'] 118128 5343 VAVDPSMHVAW True H1975_Epitope_Rep3 1210.58047899034 1210.57938993586 25.622 2 -0.7345076732066773 0.22198114619183001 1.0 ['ENST00000197268.12_1_12:13235312-13235447:+|nuORF'] 134090 12394 WQRYQHRVRRA True H1975_Epitope_Rep1 1554.83924482722 1554.8381499358602 52.707 2 -0.73457734627872 0.22199278777812692 1.0 ['ENSG00000166856|ENST00000300098|GPR182'] 25670 13315 FFEMSKETIIK True NCI_RA007_Epitope_Rep2 1371.71082445355 1371.7097299358602 56.429 2 -0.7346378041147216 0.22203103257372855 1.0 ['nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 135058 16714 YALDALSP True PC9_epitope_Rep1 848.42798401688 848.42743496793 69.118 1 -0.734643102239199 0.22203103257372855 1.0 ['ENST00000553027.1_1_12:49318338-49318461:-|nuORF', 'ENST00000546671.5_1_12:49317517-49318461:-|nuORF'] 133365 19335 WFHFKRYRYRR True PC9_epitope_Rep4 1713.9116814914898 1713.91003490379 82.479 3 -0.7346714864252498 0.2220360284876414 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 67701 6423 LTGCSEPR True PC9_epitope_Rep1 861.4014519992099 861.40034993586 29.512 2 -0.7347219609418457 0.2220360284876414 1.0 ['ENST00000521647.1_1_8:42044914-42045541:-|nuORF'] 76382 8072 NSKKHHHHAV True PC9_epitope_Rep2 1193.6166216886104 1193.61496490379 36.408 3 -0.7347433690303581 0.2220360284876414 1.0 ['nc|ENSG00000141582|O00257-3|CBX4'] 46094 13978 ISYWPADP True PC9_epitope_Rep3 947.4388830537498 947.43778993586 58.84 2 -0.7348034960495227 0.2220892306771597 1.0 ['ENSG00000102543|ENST00000251108|CDADC1'] 132 7374 AAAYRLAQN True PC9_epitope_Rep1 976.5090283022399 976.50792993586 33.177 2 -0.7348818199465806 0.2220892306771597 1.0 ['ENST00000512206.1_1_12:54428374-54428791:+|nuORF'] 21930 7924 ESHSRELAL True PC9_epitope_Rep1 1040.5250722892 1040.5239699358601 35.304 2 -0.734941248920698 0.22214242968282466 1.0 ['nc|ENSG00000070159|P26045-3|PTPN3', 'nc|ENSG00000070159|P26045-2|PTPN3', 'ENSG00000070159|ENST00000374541|PTPN3'] 3146 7183 AGDTMGHLSAP True PC9_epitope_Rep4 1055.47059418819 1055.46948993586 34.931 2 -0.734958687419155 0.22214242968282466 1.0 ['ENST00000377806.7_1_19:43023094-43032607:-|nuORF', 'ENST00000403136.1_1_19:43025413-43032607:-|nuORF', 'ENST00000344391.9_1_19:43023158-43032553:-|nuORF'] 111268 14939 TLGSTRRGID True PC9_epitope_Rep3 1074.57817049122 1074.5770699358602 62.595 2 -0.7350419906516706 0.22221391062371898 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 84228 11031 QEVEEDQDPSC True H1975_Epitope_Rep2 1277.4717759566497 1277.47066993586 47.46 2 -0.7350629597415473 0.2222188977320328 1.0 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'nc|ENSG00000162825|P0DPF2|NBPF20', 'ENSG00000219481|ENST00000430580|NBPF1', 'nc|ENSG00000219481|Q3BBV0|NBPF1', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 31401 8912 GEDCVVMIW True H1975_Epitope_Rep1 1050.45143896674 1050.45034993586 39.183 2 -0.7350931857850812 0.2222188977320328 1.0 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN'] 133805 25207 WLRRLILELLK True PC9_epitope_Rep6 1451.9340396455098 1451.93239490379 112.2 3 -0.7351044346686387 0.2222188977320328 1.0 ['MTOR|p.S1288I|1|0.12|ENSG00000198793|chr1:11204642-11204642|C/A|missense_variant'] 12846 19046 DLLAKDKTI True PC9_epitope_Rep1 1015.59136094387 1015.59026993586 78.052 2 -0.7351634213141321 0.2222255463643027 1.0 ['OR4S2|p.V269Wfs*12|1|0.23|ENSG00000174982|chr11:55651707-55651707|G/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 36196 8354 GVFRCISI True PC9_epitope_Rep5 893.4793083970899 893.47820993586 37.076 2 -0.7351951867572009 0.2222255463643027 1.0 ['SLC38A10|p.P199S|1|0.28|ENSG00000157637|chr17:81280640-81280640|G/A|missense_variant'] 19471 5683 ELQEGPEKP True NCI_RA007_Epitope_Rep2 1025.5029398622898 1025.50184993586 26.719 2 -0.735200785789738 0.2222255463643027 1.0 ['ENST00000524001.1_1_8:21768344-21770030:-|nuORF', 'ENSG00000147443|ENST00000276420|DOK2'] 8674 9622 AVAYIAGF True NCI_RA007_Epitope_Rep3 810.4275900940598 810.42648993586 44.929 2 -0.7352234973093791 0.2222255463643027 1.0 ['ENSG00000157240|ENST00000287934|FZD1'] 78601 16959 PDSFNIPGSS True PC9_epitope_Rep3 1019.45598966987 1019.45488993586 70.395 2 -0.7352392160849283 0.2222255463643027 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 57082 13316 LEELEEEF True PC9_epitope_Rep5 1036.4600719907999 1036.45896993586 56.232 2 -0.7352495327843058 0.2222255463643027 1.0 ['ENST00000600274.5_1_19:42396347-42410935:+|nuORF', 'nc|ENSG00000076928|Q92888-2|ARHGEF1', 'ENSG00000076928|ENST00000354532|ARHGEF1', 'nc|ENSG00000076928|Q92888-3|ARHGEF1'] 25753 7585 FFPRLMTEL True PC9_epitope_Rep1 1152.6001518057599 1152.5985149037901 33.995 3 -0.7352669177531562 0.2222255463643027 1.0 ['ENSG00000156162|ENST00000414645|DPY19L4'] 126157 17171 VPFPRESLSA True PC9_epitope_Rep4 1101.5818588893299 1101.5807699358602 74.054 2 -0.7352863425590942 0.22223718063782685 1.0 ['ENST00000308448.11_1_10:89577578-89577689:-|nuORF'] 139895 19372 YVEFTRIL True PC9_epitope_Rep5 1039.5702315764697 1039.56912993586 79.561 2 -0.7352933451818752 0.22224549017261494 1.0 ['ENSG00000101335|ENST00000279022|MYL9', 'nc|ENSG00000101335|P24844-2|MYL9', 'MYL9|p.G166C|1|0.12|ENSG00000101335|chr20:36549226-36549226|G/T|missense_variant'] 15155 6919 EAEQQQLIDDH True NCI_RA007_Epitope_Rep4 1324.58952302056 1324.5884299358602 33.233 2 -0.7353422984543709 0.22224549017261494 1.0 ['ENSG00000166165|ENST00000348956|CKB', 'ENSG00000237289|ENST00000441322|CKMT1B', 'ENSG00000223572|ENST00000413453|CKMT1A', 'nc|ENSG00000237289|P12532-2|CKMT1A'] 10458 12419 CMKRHGIP True NCI_RA007_Epitope_Rep5 940.4735118239998 940.47240993586 54.426 2 -0.7354607096885009 0.22230199685887367 1.0 ['ENST00000480874.5_1_2:264964-275202:+|nuORF', 'nc|ENSG00000143727|P24666-4|ACP1', 'ENSG00000143727|ENST00000272065|ACP1', 'ENST00000484464.5_1_2:265208-277301:+|nuORF'] 113036 12046 TPVEEVEAL True H1975_Epitope_Rep3 985.4967918526899 985.49568993586 51.496 2 -0.735507411700403 0.22232526137876363 1.0 ['ENSG00000107929|ENST00000316157|LARP4B', 'LARP4B|p.S572Lfs*24|1|0.11|ENSG00000107929|chr10:815015-815052|GGCTCTCTGGAGACCACTACAGGAAGGGTGTTCACGCT/-|frameshift_variant'] 56244 13465 LDQACVPSP True PC9_epitope_Rep4 928.43241777432 928.4318649679301 59.69 1 -0.7355175714844585 0.22232526137876363 1.0 ['ENSG00000225190|ENST00000430334|PLEKHM1', 'ENST00000582201.5_1_17:62781409-62811241:-|nuORF', 'PLEKHM1|p.T670Hfs*41|1|0.31|ENSG00000225190|chr17:45453844-45453844|T/-|frameshift_variant'] 111494 23418 TLLLNRRS True PC9_epitope_Rep1 971.58761297611 971.58650993586 94.861 2 -0.7355691719892485 0.22233356765730866 1.0 ['DCLK3|p.R110Gfs*69|1|0.32|ENSG00000163673|chr3:36738333-36738333|G/-|frameshift_variant', 'ENSG00000163673|ENST00000636136|DCLK3'] 100160 6811 SLLELQVP True NCI_RA007_Epitope_Rep2 897.5171333744498 897.51602993586 31.11 2 -0.7355706631322445 0.22233356765730866 1.0 ['ENST00000485901.1_1_6:32974617-32975137:-|nuORF'] 130358 5965 VTVDRLTP True NCI_RA007_Epitope_Rep5 899.50763131991 899.50652993586 29.629 2 -0.7356134705192936 0.2223385480542012 1.0 ['ENST00000394703.9_1_7:86781924-86783740:+|nuORF'] 25609 8963 FETFYQRFRHF True PC9_epitope_Rep3 1576.75753183552 1576.75588490379 39.424 3 -0.7356410956177101 0.2223385480542012 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5', 'ZKSCAN5|p.S226Ffs*19|1|0.13|ENSG00000196652|chr7:99520207-99520208|-/T|frameshift_variant'] 58371 10035 LEVIYTIEP True PC9_epitope_Rep1 1075.58012755383 1075.57902993586 43.467 2 -0.7356663307317318 0.2223385480542012 1.0 ['ENST00000378770.1_1_4:190394307-190396341:+|nuORF', 'nc|ENSG00000205100|Q58FG1|HSP90AA4P'] 58663 13573 LFHNNKTWNLK True H1975_Epitope_Rep3 1413.7517181790897 1413.7506299358602 57.492 2 -0.7356849777536799 0.22235017872365884 1.0 ['nc|ENSG00000198105|Q8NDW4-2|ZNF248'] 118778 8225 VEEAAEGVLR True H1975_Epitope_Rep1 1071.5560380643099 1071.5549499358601 36.581 2 -0.7357174632751343 0.22236180904522612 1.0 ['TRIM56|p.F497Sfs*35|1|0.12|ENSG00000169871|chr7:101088800-101088800|T/-|frameshift_variant', 'ENSG00000169871|ENST00000306085|TRIM56', 'nc|ENSG00000169871|Q9BRZ2-2|TRIM56'] 27391 11027 FNDGNAAVV True PC9_epitope_Rep1 905.4242956187699 905.42374496793 47.304 1 -0.7357573265772696 0.22237674397739 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 65606 20657 LSGLNFSLP True PC9_epitope_Rep1 946.5123823471799 946.51128993586 84.278 2 -0.7357796682141756 0.22237674397739 1.0 ['nc|ENSG00000141198|O75674-3|TOM1L1', 'ENSG00000141198|ENST00000575882|TOM1L1'] 80671 11239 PLPPVPASP True PC9_epitope_Rep6 873.4960040070499 873.49490993586 54.228 2 -0.7357823282730179 0.22237674397739 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 46447 14803 ITLSYQEQEL True PC9_epitope_Rep2 1222.60813320682 1222.60648490379 62.205 3 -0.7358064586201826 0.22237674397739 1.0 ['ENSG00000042429|ENST00000251871|MED17'] 119762 11790 VETQKLAYME True NCI_RA007_Epitope_Rep1 1210.5903749676997 1210.58926993586 49.839 2 -0.7358172871150394 0.22237674397739 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 58258 3948 LETAGVAR True PC9_epitope_Rep5 815.45011644379 815.44900993586 20.266 2 -0.7358174977642737 0.22237674397739 1.0 ['ENST00000473515.5_1_6:108067761-108070999:-|nuORF'] 97086 13426 SEYQSVKLVGP True H1975_Epitope_Rep1 1205.6292030045697 1205.62810993586 56.756 2 -0.7358212544963056 0.22237674397739 1.0 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 58192 15525 LESNKGKSML True PC9_epitope_Rep2 1105.58014463717 1105.5790499358602 64.991 2 -0.7358244132427603 0.22237674397739 1.0 ['ENSG00000271601|ENST00000604000|LIX1L'] 70585 5453 LYYHWCVRTPP True NCI_RA007_Epitope_Rep1 1433.6914264216498 1433.68978490379 25.284 3 -0.7358379827927782 0.22237674397739 1.0 ['OR2AK2|p.A148Dfs*54|1|0.41|ENSG00000187080|chr1:247965819-247965819|C/-|frameshift_variant'] 97571 8765 SGVTITEL True PC9_epitope_Rep5 818.43854870058 818.43744993586 38.657 2 -0.7358508223559267 0.22239667444225134 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'TNR|p.D691Efs*23|1|0.14|ENSG00000116147|chr1:175366117-175366119|AGG/T|frameshift_variant', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.S583Mfs*29|1|0.13|ENSG00000116147|chr1:175386061-175386062|-/A|frameshift_variant'] 139135 14210 YSQHTQMV True H1975_Epitope_Rep1 992.4385657839199 992.43801496793 59.837 1 -0.7358584575310926 0.22239667444225134 1.0 ['nc|ENSG00000163701|Q8NFR9-3|IL17RE', 'ENSG00000163701|ENST00000383814|IL17RE', 'nc|ENSG00000163701|Q8NFR9-4|IL17RE', 'ENST00000383815.7_1_3:9944714-9956386:+|nuORF', 'nc|ENSG00000163701|Q8NFR9-2|IL17RE', 'ENST00000483258.1_1_3:9952571-9953043:+|nuORF'] 61020 4457 LLAQEHLRHFL True PC9_epitope_Rep1 1375.77245362367 1375.7707949037901 22.028 3 -0.735896533781971 0.22239667444225134 1.0 ['ENSG00000125998|ENST00000374408|FAM83C'] 140134 7614 YVRNETIKCI True NCI_RA007_Epitope_Rep1 1237.6488929033299 1237.64725490379 33.609 3 -0.7359451166135951 0.22245316027931875 1.0 ['ENST00000345306.10_2_5:68665685-68667980:+|nuORF'] 11904 4425 DHRRRRGERDE True PC9_epitope_Rep2 1480.73556760432 1480.73392490379 22.377 3 -0.7360145195683041 0.2224797392266515 1.0 ['nc|ENSG00000121440|Q9UPQ7-3|PDZRN3', 'PDZRN3|p.H870Afs*142|1|0.12|ENSG00000121440|chr3:73383959-73383960|-/T|frameshift_variant'] 48034 13891 KALEKHRMYM True H1975_Epitope_Rep2 1305.66858280209 1305.66694490379 58.576 3 -0.7360473384698364 0.22249136500246713 1.0 ['nc|ENSG00000132463|Q12849-5|GRSF1', 'ENSG00000132463|ENST00000254799|GRSF1', 'ENST00000505068.5_1_4:71691792-71705589:-|nuORF'] 11199 6557 DEKYWSRRYKN True NCI_RA007_Epitope_Rep1 1543.7531747310697 1543.7515349037901 29.521 3 -0.736071239618948 0.22251128853802218 1.0 ['ENST00000594723.1_1_19:49134096-49134354:-|nuORF', 'ENSG00000105516|ENST00000222122|DBP'] 57728 5972 LENLSTASS True H1975_Epitope_Rep2 920.4450906330001 920.44398993586 27.95 2 -0.7360758432130848 0.22251128853802218 1.0 ['nc|ENSG00000075391|Q9UJF2|RASAL2', 'ENSG00000075391|ENST00000367649|RASAL2'] 13604 5918 DPRSQLQQFSH True H1975_Epitope_Rep1 1341.64256165293 1341.6414699358602 27.835 2 -0.7360817409271456 0.22251128853802218 1.0 ['ENSG00000130749|ENST00000253048|ZC3H4'] 30347 5274 GAEDGRVYVY True H1975_Epitope_Rep3 1127.5247379360299 1127.52310490379 25.369 3 -0.7360976859774143 0.2225229131468385 1.0 ['GPLD1|p.G753A|1|0.18|ENSG00000112293|chr6:24436676-24436676|C/G|missense_variant'] 64038 10068 LQDFKALPP True H1975_Epitope_Rep1 1027.5702315764697 1027.56912993586 43.667 2 -0.7361879553932066 0.22256443992584177 1.0 ['nc|ENSG00000184347|O75094-3|SLIT3', 'ENSG00000184347|ENST00000519560|SLIT3', 'nc|ENSG00000184347|O75094-4|SLIT3', 'nc|ENSG00000184347|O75094-2|SLIT3', 'SLIT3|p.S1325P|1|0.33|ENSG00000184347|chr5:168671352-168671352|A/G|missense_variant'] 111002 7460 TLDGAIKHANF True NCI_RA007_Epitope_Rep2 1185.61422164677 1185.6131299358601 33.645 2 -0.7362338761004271 0.22257606339238992 1.0 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1'] 46543 5871 ITQSTEIR True NCI_RA007_Epitope_Rep1 946.5083595959 946.50726993586 26.889 2 -0.7363001105584827 0.22263253894686483 1.0 ['ENST00000446618.1_1_22:19245879-19246326:+|nuORF'] 56129 15494 LDLWEFFCRKK True NCI_RA007_Epitope_Rep2 1483.7645913619097 1483.7634899358602 64.972 2 -0.7363184419001946 0.22264416104773724 1.0 ['nc|ENSG00000111224|Q9NR21-1|PARP11', 'ENSG00000111224|ENST00000228820|PARP11', 'nc|ENSG00000111224|Q9NR21-5|PARP11', 'nc|ENSG00000111224|Q9NR21-2|PARP11', 'ENST00000476985.5_1_12:3921210-3931106:-|nuORF'] 112959 8766 TPSGKLVSI True NCI_RA007_Epitope_Rep3 900.5280324113199 900.52692993586 41.569 2 -0.7363420727215184 0.22267073316588926 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'FARP1|p.H110Qfs*8|1|0.2|ENSG00000152767|chr13:98368127-98368127|C/-|frameshift_variant', 'nc|ENSG00000152767|Q9Y4F1-3|FARP1'] 132264 5692 VYLAEKGEND True NCI_RA007_Epitope_Rep3 1136.5349682665599 1136.53333490379 29.369 3 -0.736422292898042 0.2227272047720851 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 57252 10764 LEFQGKNTFL True H1975_Epitope_Rep1 1195.62372370131 1195.62262993586 46.365 2 -0.7365276601073699 0.22276206422292652 1.0 ['ENSG00000143315|ENST00000368090|PIGM'] 1168 9151 AEAVEQRLAAQ True H1975_Epitope_Rep1 1184.61494992276 1184.6138499358601 40.105 2 -0.7365277093342187 0.22276206422292652 1.0 ['ENST00000578774.1_1_17:38517261-38520175:+|nuORF'] 122920 16945 VGVTAAAA True H1975_Epitope_Rep1 658.3649898374999 658.36444496793 70.599 1 -0.7365859487513431 0.22276206422292652 1.0 ['ENSG00000174279|ENST00000308618|EVX2'] 131565 8339 VVVQQQTRPVP True H1975_Epitope_Rep3 1249.71427004121 1249.7131699358602 37.06 2 -0.7366415933448213 0.22276369289643627 1.0 ['CLEC4F|p.W538Sfs*51|1|0.2|ENSG00000152672|chr2:70809783-70809784|CC/-|frameshift_variant', 'nc|ENSG00000152672|Q8N1N0-2|CLEC4F', 'ENSG00000152672|ENST00000272367|CLEC4F'] 4904 17037 ALGLANFNAI True PC9_epitope_Rep6 1002.5498304850599 1002.54872993586 78.089 2 -0.7366440805530575 0.22276369289643627 1.0 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 19082 15499 ELHLVHWNAVR True PC9_epitope_Rep4 1372.73640246812 1372.7353099358602 67.542 2 -0.7366656631258225 0.22276369289643627 1.0 ['ENSG00000169239|ENST00000318636|CA5B'] 123205 6679 VHKVIHTGEK True NCI_RA007_Epitope_Rep4 1146.65094150866 1146.6493049037902 32.313 3 -0.7366751743891016 0.22276369289643627 1.0 ['ENSG00000196350|ENST00000601693|ZNF729'] 830 8559 ADDRTLKVWRT True NCI_RA007_Epitope_Rep1 1359.7258973540697 1359.72424490379 37.295 3 -0.7367492105093225 0.22283510471321583 1.0 ['HIRA|p.S197T|1|0.3|ENSG00000100084|chr22:19396851-19396851|C/G|missense_variant'] 64182 11594 LQHLDLLNN True PC9_epitope_Rep6 1078.57710786206 1078.5760099358602 55.712 2 -0.7367608997890723 0.2228467218750934 1.0 ['ENSG00000108829|ENST00000225972|LRRC59'] 101579 21728 SPDVMFDKI True PC9_epitope_Rep1 1050.50558271458 1050.5044899358602 88.408 2 -0.7368252252788929 0.22286662381728226 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-5|OTOF', 'OTOF|p.I317M|1|0.45|ENSG00000115155|chr2:26489687-26489687|G/C|missense_variant', 'OTOF|p.A1060Qfs*86|1|0.57|ENSG00000115155|chr2:26474623-26474623|C/-|frameshift_variant'] 9095 16831 AVLDRNVAI True PC9_epitope_Rep2 969.5607295219299 969.55962993586 69.989 2 -0.7368348090695268 0.22286662381728226 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 24941 15474 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 64.894 2 -0.736846433497948 0.22286662381728226 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 46426 8063 ITLEDYEQAAK True NCI_RA007_Epitope_Rep1 1279.62959692739 1279.6284899358602 35.361 2 -0.7368895076029599 0.2228715771852206 1.0 ['nc|ENSG00000133805|Q01432-2|AMPD3', 'nc|ENSG00000133805|Q01432-3|AMPD3', 'ENSG00000133805|ENST00000396553|AMPD3', 'nc|ENSG00000133805|Q01432-5|AMPD3', 'nc|ENSG00000133805|Q01432-4|AMPD3'] 24883 1661 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 8.7966 2 -0.7368914535287828 0.2228715771852206 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 128026 25271 VRRGKKRVK True PC9_epitope_Rep3 1125.75707834305 1125.75657496793 102.61 1 -0.736891611528096 0.2228715771852206 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 94056 16420 RVRVKGGG True H1975_Epitope_Rep1 827.5089687325898 827.50786993586 68.519 2 -0.7369540353703622 0.22288319258650324 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 132063 9595 VYIHVESKL True NCI_RA007_Epitope_Rep3 1086.60734536118 1086.6062499358602 44.828 2 -0.7370140732908318 0.22288814491540623 1.0 ['ENST00000323387.5_10:47416870-47420453:+|nuORF'] 97451 16684 SGGRKGKG True PC9_epitope_Rep5 745.4194850218498 745.41893496793 69.178 1 -0.7370152599765747 0.22288814491540623 1.0 ['ENST00000374201.7_2_10:49482774-49482885:-|nuORF'] 3612 9852 AGPNLEGDFK True PC9_epitope_Rep2 1046.50327421546 1046.5021699358601 43.23 2 -0.7370615123406605 0.22288814491540623 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant'] 80818 21324 PLTLDELFG True PC9_epitope_Rep2 1003.52261267771 1003.52150993586 87.487 2 -0.7370902723467577 0.22289975937467307 1.0 ['ENST00000409260.5_1_2:220110626-220111251:+|nuORF', 'ENST00000486813.1_1_2:220110626-220111851:+|nuORF', 'ENST00000409516.7_1_2:220110217-220112141:+|nuORF', 'ENST00000491697.1_1_2:220110217-220110827:+|nuORF', 'ENST00000409638.7_1_2:220110217-220111398:+|nuORF', 'ENST00000496443.5_1_2:220110461-220110827:+|nuORF', 'ENST00000475696.5_1_2:220110350-220111398:+|nuORF'] 16661 6481 EETLDEGPP True H1975_Epitope_Rep2 985.4240208352498 985.42292993586 29.845 2 -0.7371284799702059 0.2229047106647537 1.0 ['ENSG00000100442|ENST00000396062|FKBP3'] 18322 3120 EIVFRYYHKLR True NCI_RA007_Epitope_Rep1 1522.8408675366597 1522.8392249037902 16.024 3 -0.7371570027454246 0.2229047106647537 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF', 'nc|ENSG00000160593|Q86YT9-4|JAML'] 98767 13423 SISGTNGQLL True PC9_epitope_Rep5 988.5189242796 988.51782993586 56.647 2 -0.7372575647653397 0.2229047106647537 1.0 ['ENST00000381813.4_1_2:10197463-10197871:-|nuORF'] 132298 24286 VYLNMILLYLL True PC9_epitope_Rep5 1366.7934318787 1366.7923299358602 98.435 2 -0.7372801001219 0.2229279373524225 1.0 ['ENSG00000175283|ENST00000372586|DOLK'] 122458 20877 VGSLYLAYIL True PC9_epitope_Rep3 1110.63249747986 1110.6314099358601 85.577 2 -0.7372851276486022 0.2229279373524225 1.0 ['ENSG00000196715|ENST00000360768|VKORC1L1'] 139725 5435 YTWRWVWSWEW True NCI_RA007_Epitope_Rep4 1683.7622828627896 1683.76063490379 27.482 3 -0.737351551603042 0.2229395501755959 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 56727 13531 LEAIENNKY True H1975_Epitope_Rep1 1092.54513902744 1092.5440499358601 57.168 2 -0.7374337679379994 0.22294783089498932 1.0 ['ENSG00000065548|ENST00000337859|ZC3H15'] 24866 17076 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 71.293 2 -0.7374350322385071 0.22294783089498932 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 120466 16940 VFVFGPDK True PC9_epitope_Rep3 907.4803539429098 907.47924993586 70.317 2 -0.7374511080190783 0.22297438656265878 1.0 ['ENSG00000117592|ENST00000340385|PRDX6'] 19527 6548 ELQQLQEFEIP True H1975_Epitope_Rep2 1372.68744615668 1372.68580490379 30.097 3 -0.7375010532349582 0.22298266586969515 1.0 ['ENSG00000108798|ENST00000225941|ABI3', 'nc|ENSG00000108798|Q9P2A4-2|ABI3'] 46992 9605 IVPMMEETKS True NCI_RA007_Epitope_Rep2 1163.55663231127 1163.55552993586 41.976 2 -0.7375037292987854 0.22298266586969515 1.0 ['RYR2|p.T1730M|2|0.22|ENSG00000198626|chr1:237614317-237614317|C/T|missense_variant'] 13515 5078 DPGKQVAG True H1975_Epitope_Rep1 770.3922672144998 770.39116993586 24.604 2 -0.7375419442406462 0.22299094468186845 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2'] 67725 12923 LTGIWQMRHLK True H1975_Epitope_Rep3 1381.7652600682502 1381.76416993586 54.936 2 -0.7375428044377385 0.22299094468186845 1.0 ['nc|ENSG00000158604|Q7Z7H5-2|TMED4', 'ENSG00000158604|ENST00000457408|TMED4'] 84997 17806 QIEFIIKQL True PC9_epitope_Rep5 1130.6699456177398 1130.6688499358602 73.51 2 -0.7375632059803842 0.22300255517535078 1.0 ['nc|ENSG00000135931|Q7Z3E5-2|ARMC9', 'ENSG00000135931|ENST00000611582|ARMC9'] 59656 4557 LGSRTHRQPL True NCI_RA007_Epitope_Rep2 1163.65233849099 1163.65069490379 22.355 3 -0.7376406403242645 0.2230556593201345 1.0 ['nc|ENSG00000181856|P14672-2|SLC2A4', 'ENSG00000181856|ENST00000317370|SLC2A4'] 124774 25349 VLKSCCLLLIA True PC9_epitope_Rep3 1174.68177325474 1174.6806699358601 102.92 2 -0.737660782722347 0.2230556593201345 1.0 ['ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 27167 5427 FLSGWKDNP True H1975_Epitope_Rep2 1062.51344497634 1062.5123499358601 25.901 2 -0.7377041154980848 0.22307887698537213 1.0 ['ENSG00000188676|ENST00000502986|IDO2'] 98272 15998 SIFETNCHS True PC9_epitope_Rep5 1036.4283950230401 1036.42728993586 66.526 2 -0.7377377798814517 0.22307887698537213 1.0 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B', 'ENST00000474583.5_1_2:24032019-24046413:-|nuORF'] 115856 9586 TVNPQDPSY True H1975_Epitope_Rep1 1019.45598966987 1019.45488993586 41.797 2 -0.7377935669496927 0.22310209326301006 1.0 ['ENSG00000117971|ENST00000261751|CHRNB4'] 62380 10353 LLRRCLADR True NCI_RA007_Epitope_Rep2 1114.63933127914 1114.6382299358602 44.862 2 -0.7378084600956711 0.22310209326301006 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 106487 9160 SVVIIPFAI True NCI_RA007_Epitope_Rep5 957.58990439189 957.58880993586 41.884 2 -0.737900634123019 0.223113700881518 1.0 ['nc|ENSG00000242019|Q8N743|KIR3DL3', 'ENSG00000242019|ENST00000291860|KIR3DL3'] 63700 7916 LPQFYDPV True NCI_RA007_Epitope_Rep1 977.4858332461698 977.48472993586 34.785 2 -0.7379338306036574 0.22314852165598434 1.0 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'ENST00000454469.6_1_9:214976-340322:+|nuORF'] 103982 22308 SRRLAPVG True PC9_epitope_Rep1 854.5086343794198 854.50752993586 90.619 2 -0.7379417651427133 0.22314852165598434 1.0 ['ENST00000464942.6_1_12:122710297-122710606:-|nuORF'] 65712 6675 LSHNSIDTI True PC9_epitope_Rep6 998.50327421546 998.50216993586 34.421 2 -0.7379558815874578 0.22314852165598434 1.0 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 120481 18697 VFVMTILII True NCI_RA007_Epitope_Rep2 1047.6402257125899 1047.6391299358602 77.528 2 -0.7380315563862238 0.22318667363860462 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 106556 12293 SVVTVIDVFY True H1975_Epitope_Rep1 1140.60667665484 1140.60556993586 52.309 2 -0.7380353230217332 0.22318667363860462 1.0 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 68281 12413 LTRKYNELL True PC9_epitope_Rep2 1148.65535818276 1148.6537249037901 53.054 3 -0.7380658036043595 0.22319827895302977 1.0 ['nc|ENSG00000120885|P10909-3|CLU', 'nc|ENSG00000120885|P10909-4|CLU', 'ENST00000522299.5_1_8:27457218-27472184:-|nuORF', 'nc|ENSG00000120885|P10909-6|CLU', 'ENSG00000120885|ENST00000316403|CLU', 'nc|ENSG00000120885|P10909-5|CLU', 'nc|ENSG00000120885|P10909-2|CLU'] 55097 7621 LALPDAKQRPF True PC9_epitope_Rep4 1254.70845638478 1254.70681490379 36.695 3 -0.738222246579229 0.2232480317901373 1.0 ['ENST00000359297.6_1_1:36806079-36806220:-|nuORF'] 53022 24179 KRRRPRYRKRL True NCI_RA007_Epitope_Rep5 1584.0073132118298 1584.0062099358602 100.41 2 -0.7382855052592265 0.2232480317901373 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3'] 36988 14953 GVRRRRPPR True NCI_RA007_Epitope_Rep3 1148.7115251329599 1148.71042993586 66.256 2 -0.7382871767148339 0.2232480317901373 1.0 ['ENSG00000172986|ENST00000389617|GXYLT2'] 24882 1597 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 8.4601 2 -0.738351227029276 0.22325296525350302 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 125063 25652 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 106.17 3 -0.738380910012879 0.22325296525350302 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 118804 8552 VEEEEEYI True PC9_epitope_Rep5 1038.43933654622 1038.4382299358601 37.839 2 -0.7383897417919093 0.22325296525350302 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 104402 8445 SSHHALLDRG True H1975_Epitope_Rep1 1091.54720471611 1091.5461099358602 37.412 2 -0.7384279861370939 0.22326950079168284 1.0 ['ENST00000526177.5_1_11:75155472-75160957:-|nuORF', 'ENST00000527322.5_1_11:75155472-75168807:-|nuORF'] 59622 12661 LGSIDWEA True H1975_Epitope_Rep1 889.41814760917 889.4175949679301 53.754 1 -0.7384637163172139 0.22326950079168284 1.0 ['chr1:103745515-103750424|173|21.9|0.0|21.06|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|4', 'chr1:103745227-103750424|306|24.34|0.0|21.21|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|4', 'chr1:103651377-103750424|112|20.44|0.0|20.96|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|4', 'chr1:103651250-103750424|129|11.88|0.0|20.18|+|0|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|4', 'chr1:103651089-103750424|267|25.88|0.0|21.3|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|4'] 83632 8815 QDYLLLINCQ True H1975_Epitope_Rep1 1221.60635938501 1221.6052699358602 38.829 2 -0.7384939467235553 0.22326950079168284 1.0 ['nc|ENSG00000109458|Q13480-2|GAB1', 'ENSG00000109458|ENST00000262994|GAB1', 'GAB1|p.P311Qfs*24|1|0.19|ENSG00000109458|chr4:143438336-143438336|C/-|frameshift_variant'] 126409 18440 VPLLGGLL True H1975_Epitope_Rep3 780.5109257952 780.51037496793 77.309 1 -0.7385002842910369 0.22326950079168284 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant'] 66891 10002 LSWPNDSAS True NCI_RA007_Epitope_Rep4 975.42977492203 975.42866993586 45.316 2 -0.7385480793480328 0.22327776781980044 1.0 ['ENST00000331772.8_1_10:90045168-90074247:-|nuORF'] 95376 9686 SAIERNARII True PC9_epitope_Rep5 1141.6567551650899 1141.65511490379 42.225 3 -0.738552270496119 0.22327776781980044 1.0 ['ENSG00000169122|ENST00000519262|FAM110B'] 43918 14920 ILDWDYYI True PC9_epitope_Rep5 1099.52261267771 1099.5215099358602 62.394 2 -0.7385904515735483 0.22328936952008246 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 138000 5919 YQAQDVGT True PC9_epitope_Rep6 880.3926611373199 880.39156993586 31.042 2 -0.7386747229026646 0.22330097087378642 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 32920 14475 GIPIFMVL True PC9_epitope_Rep3 888.51429692348 888.5131899358599 60.787 2 -0.7387119396031782 0.22334388626724808 1.0 ['ENSG00000213463|ENST00000256366|SYNJ2BP'] 5092 15632 ALLRPQLA True PC9_epitope_Rep2 880.54943656224 880.54832993586 65.405 2 -0.7387153151316418 0.22334388626724808 1.0 ['ENST00000525455.5_1_11:62529053-62530037:+|nuORF', 'ENST00000301788.11_1_11:62529053-62530368:+|nuORF', 'ENST00000524819.5_1_11:62529062-62529592:+|nuORF'] 4993 19815 ALKYYKEAL True PC9_epitope_Rep4 1097.6120963884498 1097.61098993586 84.346 2 -0.7387528030897108 0.22334388626724808 1.0 ['ENSG00000187862|ENST00000368236|TTC24'] 131115 25266 VVNIRNLIEK True PC9_epitope_Rep2 1196.72410644892 1196.7235749679298 102.85 1 -0.7387698473713823 0.22334388626724808 1.0 ['ENST00000395603.7_1_X:76939207-76939318:-|nuORF'] 139770 12857 YVAYLKLN True NCI_RA007_Epitope_Rep2 982.5487678558999 982.54766993586 54.629 2 -0.7387985218798477 0.22334388626724808 1.0 ['ENSG00000130948|ENST00000375263|HSD17B3', 'nc|ENSG00000130948|P37058-2|HSD17B3', 'ENST00000464104.5_1_9:98997744-99012284:-|nuORF'] 89818 23761 RFHVLKMLLNL True PC9_epitope_Rep2 1382.8220466683797 1382.8204049037902 96.869 3 -0.7388175235102719 0.22334388626724808 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 108471 13619 TEEQMAQQPPK True H1975_Epitope_Rep3 1285.5972512532896 1285.59614993586 57.673 2 -0.7388316302035215 0.22334388626724808 1.0 ['ENSG00000075240|ENST00000406902|GRAMD4'] 127508 10075 VQVAEAARAP True PC9_epitope_Rep3 1010.5508931142198 1010.54978993586 43.707 2 -0.738849165647598 0.22334388626724808 1.0 ['ENSG00000049860|ENST00000261416|HEXB', 'ENST00000515528.1_1_5:73981085-73985366:+|nuORF', 'ENST00000513079.5_1_5:73981085-74001232:+|nuORF'] 78602 15640 PDSFNIPGSS True PC9_epitope_Rep4 1019.45598966987 1019.4554749679301 68.085 1 -0.7388787053307191 0.22334388626724808 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 37509 17009 GYHLFCALL True PC9_epitope_Rep2 1035.5211732090697 1035.5200699358602 70.677 2 -0.7388903893279528 0.22334388626724808 1.0 ['nc|ENSG00000160781|Q6TCH4-3|PAQR6', 'nc|ENSG00000160781|Q6TCH4-4|PAQR6', 'nc|ENSG00000160781|Q6TCH4-5|PAQR6', 'ENSG00000160781|ENST00000292291|PAQR6', 'nc|ENSG00000160781|Q6TCH4-2|PAQR6'] 82825 8133 PVSPVAPR True PC9_epitope_Rep5 821.47593726881 821.47484993586 36.222 2 -0.7388975137335799 0.22334388626724808 1.0 ['ENST00000446816.1_1_2:96874348-96906424:+|nuORF'] 45337 13814 ISDDIDDP True PC9_epitope_Rep6 888.3712569864 888.37014993586 64.939 2 -0.7389302897250992 0.22334388626724808 1.0 ['ENSG00000154059|ENST00000284202|IMPACT'] 78593 16976 PDSFNIPGSS True PC9_epitope_Rep1 1019.45598966987 1019.4554749679301 70.122 1 -0.7389491906741239 0.22334388626724808 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 134322 11541 WRWQLEEERKR True H1975_Epitope_Rep1 1614.8379074145398 1614.8368099358602 49.376 2 -0.738955615734382 0.22334388626724808 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 33543 8294 GLIKQIGENLI True PC9_epitope_Rep3 1196.71287305888 1196.71123490379 36.876 3 -0.7390571315727735 0.22338535055626074 1.0 ['ENSG00000151640|ENST00000338492|DPYSL4', 'nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2', 'ENST00000511535.1_1_4:5823489-5889136:-|nuORF', 'nc|ENSG00000072832|Q14194|CRMP1', 'ENSG00000072832|ENST00000324989|CRMP1'] 89819 22953 RFHVLKMLLNL True PC9_epitope_Rep4 1382.8220466683797 1382.8204049037902 96.509 3 -0.7391188043869403 0.22339694770480542 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 69279 10147 LVPELQAT True PC9_epitope_Rep1 869.4858332461699 869.48472993586 43.906 2 -0.7391391203984498 0.223408544506996 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 129535 16739 VTFYPQDAP True PC9_epitope_Rep3 1036.4865615221597 1036.48546993586 69.525 2 -0.7391668641813454 0.223435073467925 1.0 ['ENSG00000128965|ENST00000617768|CHAC1'] 13366 5404 DNDLGSSALR True H1975_Epitope_Rep3 1046.4992514641801 1046.49814993586 25.848 2 -0.7391904670253777 0.22344666935447743 1.0 ['ENST00000296550.11_1_4:150999880-151000132:+|nuORF'] 3570 13523 AGNVYIVKISA True PC9_epitope_Rep5 1133.6444591458899 1133.6433699358602 57.038 2 -0.7392097044583291 0.2234881290129909 1.0 ['ENSG00000166450|ENST00000389286|PRTG'] 110942 7319 TLCDPKDP True H1975_Epitope_Rep2 887.4058686733099 887.40476993586 33.092 2 -0.7392617210286776 0.2235046435930361 1.0 ['ENSG00000152208|ENST00000282020|GRID2', 'nc|ENSG00000152208|O43424-2|GRID2', 'ENST00000505687.5_1_4:93225807-94138074:+|nuORF'] 107402 5561 SYTPSSSR True NCI_RA007_Epitope_Rep3 883.40356017419 883.40246993586 28.868 2 -0.739287866321782 0.2235046435930361 1.0 ['ENST00000311481.10_1_11:66044108-66044312:+|nuORF'] 16094 5626 EEDVRFTHWN True NCI_RA007_Epitope_Rep1 1331.5894634509098 1331.58781490379 25.946 3 -0.7393022351836065 0.2235046435930361 1.0 ['MRC1|p.E583D|1|0.23|ENSG00000260314|chr10:17863648-17863648|G/T|missense_variant'] 108560 8547 TEGSEIEY True H1975_Epitope_Rep3 926.38690705054 926.3863549679301 37.864 1 -0.7393247273750423 0.2235046435930361 1.0 ['DZIP1|p.D731Y|1|0.17|ENSG00000134874|chr13:95587566-95587566|C/A|missense_variant'] 46101 8068 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 37.722 2 -0.7393712111962398 0.22351623740201568 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 16200 8307 EEFGYNADTQK True NCI_RA007_Epitope_Rep1 1300.5571602631196 1300.55606993586 36.313 2 -0.7394067579339427 0.2235278308647874 1.0 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1'] 69106 15925 LVKPYVKIL True PC9_epitope_Rep4 1071.7056028504699 1071.7045099358602 69.183 2 -0.7394556158949404 0.2235626091760104 1.0 ['ENSG00000265817|ENST00000481490|FSBP'] 125181 11693 VLQDFRSL True PC9_epitope_Rep2 976.5341804209199 976.53308993586 50.308 2 -0.7394597411976668 0.2235626091760104 1.0 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.R1708Afs*23|1|0.17|ENSG00000185010|chrX:154928668-154928668|G/-|frameshift_variant', 'F8|p.E1756Nfs*16|1|0.1|ENSG00000185010|chrX:154906527-154906527|C/-|frameshift_variant', 'F8|p.T1468Kfs*91|1|0.69|ENSG00000185010|chrX:154929363-154929387|CTTTGATCACCAGTCATCTCCAAGG/-|frameshift_variant'] 34061 17656 GNRHARRV True NCI_RA007_Epitope_Rep5 964.54272847236 964.54162993586 74.698 2 -0.7394615647966823 0.2235626091760104 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 31402 14633 GEDCYFFF True NCI_RA007_Epitope_Rep5 1026.3793195723 1026.3782299358602 62.954 2 -0.7394832069002839 0.2235675256038936 1.0 ['ZC3H11A|p.K286Nfs*14|1|0.35|ENSG00000058673|chr1:203833831-203833831|G/-|frameshift_variant', 'nc|ENSG00000214558|P0DQW0|ZC3H11C', 'ENSG00000215817|ENST00000651890|ZC3H11B', 'ENSG00000058673|ENST00000367210|ZC3H11A'] 32294 16282 GFTGDGFT True PC9_epitope_Rep5 800.33408363204 800.3335349679301 67.622 1 -0.7394985920299344 0.2235675256038936 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2'] 10710 13024 CTDGDADSWVP True PC9_epitope_Rep2 1164.43935362956 1164.43824993586 55.378 2 -0.7395109669325356 0.2235675256038936 1.0 ['ENST00000601438.2_1_19:47724796-47724889:-|nuORF'] 48347 2737 KDWLVENAPG True H1975_Epitope_Rep2 1127.56112344475 1127.55946490379 14.585 3 -0.7395974410425074 0.22360229902216913 1.0 ['ENSG00000171451|ENST00000310045|DSEL'] 60434 10216 LILAVAGSLP True H1975_Epitope_Rep1 952.5957180483199 952.59462993586 44.237 2 -0.739620522311256 0.22360229902216913 1.0 ['ENST00000512816.1_1_5:139030646-139060149:+|nuORF'] 33446 8459 GLGLAVQAIPP True H1975_Epitope_Rep1 1034.6124307416198 1034.61132993586 37.467 2 -0.739632446204751 0.22360229902216913 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B'] 19846 8939 ELVFWRWMVR True H1975_Epitope_Rep3 1420.74379634768 1420.7421449037902 39.38 3 -0.7396826922706777 0.22362214127903504 1.0 ['ENST00000551538.5_1_14:105963624-105963882:+|nuORF', 'ENST00000546536.5_1_14:105957646-105963882:+|nuORF'] 45719 5577 ISLRSHNPV True NCI_RA007_Epitope_Rep2 1021.56687753153 1021.56578993586 26.308 2 -0.7397183703097485 0.22362214127903504 1.0 ['ENST00000567481.1_2_16:75182955-75200774:+|nuORF'] 131039 18800 VVLLRARPVI True PC9_epitope_Rep5 1134.76009803482 1134.7584449037902 77.326 3 -0.7397202762259653 0.22362214127903504 1.0 ['ENSG00000144668|ENST00000264741|ITGA9'] 139458 16291 YTFESDVWS True PC9_epitope_Rep1 1132.4713053808398 1132.46965490379 67.481 3 -0.7397544766442157 0.22363039259590983 1.0 ['ENSG00000157404|ENST00000288135|KIT', 'nc|ENSG00000157404|P10721-2|KIT', 'nc|ENSG00000157404|P10721-4|KIT'] 13483 5010 DPDYNCTDQG True H1975_Epitope_Rep3 1126.3873180567 1126.38622993586 24.397 2 -0.7397553080427612 0.22363039259590983 1.0 ['nc|ENSG00000198881|Q8WXK4|ASB12', 'ENSG00000198881|ENST00000362002|ASB12'] 68615 14246 LTYWPQKYWAV True PC9_epitope_Rep4 1453.73942215989 1453.73832993586 62.703 2 -0.7398084713287095 0.2237016912719619 1.0 ['ENSG00000185808|ENST00000360525|PIGP', 'nc|ENSG00000185808|P57054|PIGP', 'nc|ENSG00000185808|P57054-3|PIGP'] 135434 23031 YDVKPLLEL True PC9_epitope_Rep3 1088.61176203528 1088.6106699358602 93.857 2 -0.7399129730235379 0.2237066005910977 1.0 ['ENSG00000112462|ENST00000396806|OR12D3'] 65964 6922 LSLQHSWLNYR True H1975_Epitope_Rep3 1415.73098273451 1415.72988993586 31.588 2 -0.7399170702215674 0.2237066005910977 1.0 ['ZNF677|p.A197Hfs*48|1|0.12|ENSG00000197928|chr19:53238138-53238138|C/-|frameshift_variant'] 110063 13099 TIAAGVVTEI True PC9_epitope_Rep5 972.54916177872 972.54806993586 55.389 2 -0.7399307508204532 0.2237066005910977 1.0 ['ENSG00000112339|ENST00000367837|HBS1L', 'nc|ENSG00000112339|Q9Y450-4|HBS1L', 'ENST00000527005.5_1_6:135286419-135303731:-|nuORF'] 98913 14969 SIYAREPVL True PC9_epitope_Rep2 1046.5760452328998 1046.57494993586 62.836 2 -0.739949974094257 0.22371818792447198 1.0 ['ENST00000378535.4_1_12:88890181-88890376:-|nuORF'] 36960 16142 GVRIKRTS True NCI_RA007_Epitope_Rep3 915.5613982282699 915.56084496793 71.193 1 -0.7400106847857438 0.22372643551203786 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 51822 25169 KKKKRKWLRQE True PC9_epitope_Rep5 1526.9521493211398 1526.95104993586 101.96 2 -0.7400201505958721 0.22372643551203786 1.0 ['ENSG00000187862|ENST00000368236|TTC24'] 33739 9716 GLSAPVPR True H1975_Epitope_Rep3 795.46028720467 795.4597349679301 42.392 1 -0.7400508404459873 0.2237362506156441 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000124177|ENST00000373233|CHD6', 'nc|ENSG00000124177|Q8TD26-3|CHD6'] 70098 22807 LYISLVTWQRP True PC9_epitope_Rep1 1374.7659712609 1374.7648699358601 92.539 2 -0.740081696643539 0.2237362506156441 1.0 ['ENSG00000130202|ENST00000252483|NECTIN2', 'nc|ENSG00000130202|Q92692-2|NECTIN2'] 88457 13348 QYVDFHNQL True PC9_epitope_Rep6 1162.54072235334 1162.5396299358601 63.004 2 -0.740089262162476 0.2237362506156441 1.0 ['ENSG00000134899|ENST00000652225|ERCC5', 'nc|ENSG00000134899|P28715-2|ERCC5'] 68568 7600 LTWTRDAP True NCI_RA007_Epitope_Rep2 958.4872302284998 958.48612993586 34.185 2 -0.7400946593986406 0.2237362506156441 1.0 ['ENSG00000214946|ENST00000437605|TBC1D26'] 71108 8867 METLKILYK True H1975_Epitope_Rep1 1137.64676764501 1137.64566993586 39.02 2 -0.7400950582608923 0.2237362506156441 1.0 ['ENSG00000088256|ENST00000078429|GNA11'] 75599 9783 NQRWEWLAWWR True NCI_RA007_Epitope_Rep1 1629.7953143265697 1629.7942099358602 42.056 2 -0.7401085211170264 0.2237362506156441 1.0 ['ENST00000465124.1_1_9:127634977-127635226:+|nuORF'] 8159 11871 ATFSFSRSTR True PC9_epitope_Rep3 1158.57817049122 1158.5770699358602 50.68 2 -0.7401742770538222 0.2237594209387359 1.0 ['ENST00000409031.5_3_2:130940142-130940265:-|nuORF'] 65898 6986 LSLENRELW True H1975_Epitope_Rep1 1158.6033226099 1158.6022299358601 31.909 2 -0.7401879548553103 0.2237594209387359 1.0 ['nc|ENSG00000149922|O95947-2|TBX6', 'ENSG00000149922|ENST00000395224|TBX6'] 87994 22778 QVRSSQRWWMW True PC9_epitope_Rep5 1548.7408362255599 1548.7397299358602 92.608 2 -0.7402635529218146 0.22377100558158972 1.0 ['ENST00000409822.1_1_2:238486756-238499247:-|nuORF'] 86464 17142 QQSLEVILK True H1975_Epitope_Rep1 1056.6179100448799 1056.6168099358601 71.381 2 -0.7403029228802372 0.22379907776335228 1.0 ['PDE5A|p.Q666Sfs*25|1|0.2|ENSG00000138735|chr4:119519050-119519050|T/-|frameshift_variant', 'nc|ENSG00000138735|O76074-2|PDE5A', 'ENSG00000138735|ENST00000354960|PDE5A', 'ENST00000508914.1_1_4:120473609-120484125:-|nuORF'] 122094 14276 VGREGKGG True NCI_RA007_Epitope_Rep3 758.4035006045399 758.4029549679301 63.478 1 -0.7403041847910695 0.22379907776335228 1.0 ['ENST00000426163.5_1_2:208030425-208030898:-|nuORF'] 137380 24843 YLKQRLRHK True NCI_RA007_Epitope_Rep1 1240.75165860944 1240.75107496793 102.83 1 -0.7403082075498102 0.22379907776335228 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'nc|ENSG00000169247|Q8TF17-4|SH3TC2', 'SH3TC2|p.Q788Sfs*21|1|0.41|ENSG00000169247|chr5:149027371-149027371|C/-|frameshift_variant', 'ENST00000504517.5_1_5:148386573-148411207:-|nuORF'] 100842 8960 SLSAWLCETL True PC9_epitope_Rep2 1121.54269649929 1121.5415899358602 39.822 2 -0.7403274159436553 0.22379907776335228 1.0 ['ENST00000522362.6_1_8:26364258-26364426:-|nuORF'] 33631 8079 GLNDKEDLWSK True NCI_RA007_Epitope_Rep4 1303.6408303174296 1303.63972993586 37.858 2 -0.7403283907288054 0.22379907776335228 1.0 ['PDYN|p.G83W|1|0.47|ENSG00000101327|chr20:1980841-1980841|C/A|missense_variant'] 62197 18038 LLPPGQVSL True PC9_epitope_Rep6 922.5487678559 922.54766993586 82.014 2 -0.740364406422305 0.22380398125764767 1.0 ['ENSG00000180878|ENST00000316375|C11orf42'] 134183 20495 WRLNRMFL True NCI_RA007_Epitope_Rep5 1134.61205390214 1134.6103949037902 85.778 3 -0.7403652941411093 0.22380398125764767 1.0 ['ENST00000525154.1_1_11:9779436-9779646:-|nuORF'] 71022 19858 MESLDGLHLP True H1975_Epitope_Rep2 1110.5379454720198 1110.5368499358601 82.368 2 -0.740391022499819 0.22380398125764767 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 104600 17905 SSTKVKNKSKK True NCI_RA007_Epitope_Rep4 1233.74048478905 1233.73882490379 77.493 3 -0.7404118381332774 0.22381556367977318 1.0 ['nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'TTC3|p.E1565Kfs*6|1|0.26|ENSG00000182670|chr21:37182841-37182841|A/-|frameshift_variant', 'ENST00000472398.5_1_21:38529111-38558109:+|nuORF'] 80462 20590 PLKYLDTP True PC9_epitope_Rep4 945.5171333744499 945.51658496793 87.352 1 -0.7404630627626481 0.22382714575623733 1.0 ['TET3|p.G1454Afs*77|1|0.36|ENSG00000187605|chr2:74101148-74101148|G/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3', 'ENST00000475405.2_1_2:74274397-74300767:+|nuORF'] 16113 7621 EEEDTPVSPK True PC9_epitope_Rep2 1129.5138984688099 1129.51225490379 34.686 3 -0.740484060913499 0.22383872748705552 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'ENST00000486327.6_1_19:47880370-47884327:+|nuORF'] 90769 18089 RKRLHFKLCKK True NCI_RA007_Epitope_Rep5 1455.8972772973095 1455.89563490379 76.378 3 -0.7405280637750402 0.2238402888646842 1.0 ['ENSG00000139517|ENST00000316334|LNX2'] 104374 7809 SSGERWIRY True H1975_Epitope_Rep1 1152.5676058075198 1152.56650993586 34.991 2 -0.7405888864889105 0.2238402888646842 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 140531 4956 YYKWDLDWKRH True NCI_RA007_Epitope_Rep1 1608.78374658336 1608.78153987172 23.361 4 -0.7406126241439849 0.2238402888646842 1.0 ['ENST00000497498.1_1_7:26242252-26242366:+|nuORF'] 30885 13364 GARQQRWQ True H1975_Epitope_Rep3 1028.5264097018799 1028.5253099358602 56.669 2 -0.74068820936422 0.2238402888646842 1.0 ['nc|ENSG00000215117|Q9Y4M8|LINC00588'] 27439 17483 FNLSFYIGF True PC9_epitope_Rep5 1106.54368247546 1106.5425899358602 72.25 2 -0.7407241590125171 0.22384518978276438 1.0 ['ENST00000506237.5_1_5:32601213-32601330:+|nuORF'] 44754 14996 IPSDIHRRE True H1975_Epitope_Rep1 1121.5941549085298 1121.59304993586 62.927 2 -0.7407513660651969 0.22384518978276438 1.0 ['ENST00000409927.5_2_2:189156919-189248555:+|nuORF', 'ENST00000409843.5_1_2:189156812-189248555:+|nuORF'] 44486 16703 INVAVVLGEV True PC9_epitope_Rep1 1011.5964463243099 1011.59534993586 69.076 2 -0.7407540459491141 0.22384518978276438 1.0 ['nc|ENSG00000020219|A6NM43|CCT8L1P', 'CCT8L2|p.I552Sfs*4|1|0.32|ENSG00000198445|chr22:16590897-16590897|T/-|frameshift_variant', 'ENSG00000198445|ENST00000359963|CCT8L2'] 10567 9303 CQSRGRCINL True PC9_epitope_Rep4 1148.5542813258398 1148.55262490379 43.392 3 -0.7408615177508795 0.22388326917912452 1.0 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-4|CRB1', 'nc|ENSG00000134376|P82279-2|CRB1', 'nc|ENSG00000134376|P82279-5|CRB1'] 19627 7404 ELRRAAPGP True H1975_Epitope_Rep1 965.5406627836898 965.53956993586 33.483 2 -0.7408854389491382 0.22388326917912452 1.0 ['nc|ENSG00000163362|Q3KP66|INAVA', 'ENSG00000163362|ENST00000413687|INAVA'] 140571 4536 YYLRSPQAK True PC9_epitope_Rep4 1124.5978433066398 1124.5961849037901 23.936 3 -0.7409770006278458 0.22390642716476697 1.0 ['SLC18A1|p.P482Q|1|0.45|ENSG00000036565|chr8:20147277-20147277|G/T|missense_variant'] 93435 8910 RRYSRETRHTK True H1975_Epitope_Rep3 1488.8021906121596 1488.80108993586 39.271 2 -0.7409861527303836 0.22390642716476697 1.0 ['ENST00000543067.5_1_X:21392559-21392961:+|nuORF'] 9097 15189 AVLDRNVAI True PC9_epitope_Rep4 969.5607295219299 969.55962993586 66.348 2 -0.74105951711447 0.22397768130212295 1.0 ['nc|ENSG00000109339|P53779-2|MAPK10', 'nc|ENSG00000109339|P53779-3|MAPK10', 'ENSG00000109339|ENST00000641462|MAPK10'] 93543 27355 RSPRGILG True PC9_epitope_Rep5 854.5086343794198 854.50752993586 112.14 2 -0.7411103188773269 0.2239892585409518 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 11484 6067 DGEEQQPPHEA True NCI_RA007_Epitope_Rep1 1235.50545904343 1235.50436993586 27.637 2 -0.74132417238476 0.22402733023033775 1.0 ['ENSG00000170638|ENST00000380909|TRABD', 'ENST00000463233.1_1_22:50624392-50636456:+|nuORF', 'nc|ENSG00000170638|Q9H4I3-2|TRABD'] 95720 4083 SCCCCCCC True PC9_epitope_Rep1 826.10688658094 826.10578993586 20.605 2 -0.7413305332210459 0.22402733023033775 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 110260 10576 TIFLCMETHY True H1975_Epitope_Rep3 1256.55696666444 1256.55586993586 45.749 2 -0.7414665188976995 0.2240687422612743 1.0 ['nc|ENSG00000147533|Q7Z5G4-3|GOLGA7', 'ENSG00000147533|ENST00000357743|GOLGA7'] 74207 7402 NICNNEGLT True NCI_RA007_Epitope_Rep2 976.42839502304 976.42728993586 33.417 2 -0.7414937323247537 0.22408854943612388 1.0 ['nc|ENSG00000085382|Q8IYU2-4|HACE1', 'ENSG00000085382|ENST00000262903|HACE1'] 121459 10449 VGINRWRFLL True NCI_RA007_Epitope_Rep5 1272.74551059984 1272.7444099358602 46.824 2 -0.7415221804465937 0.22408854943612388 1.0 ['ENSG00000121671|ENST00000616080|CRY2', 'ENSG00000008405|ENST00000008527|CRY1'] 59703 7853 LGTPGKKG True H1975_Epitope_Rep3 756.4493881678 756.44828993586 35.182 2 -0.741551877105238 0.22408854943612388 1.0 ['ENSG00000188811|ENST00000379600|NHLRC3', 'ENST00000485407.1_1_13:39616195-39618420:+|nuORF'] 2650 18874 AESWYQTKYEE True PC9_epitope_Rep5 1432.61467513924 1432.6135699358601 77.618 2 -0.741583957805308 0.2241001238122231 1.0 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q922U2'] 287 7977 AAHAFTEL True PC9_epitope_Rep1 858.42356734278 858.42246993586 35.506 2 -0.7416922940312516 0.22412327152851325 1.0 ['ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 48126 3917 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 20.188 3 -0.7417006260717511 0.22412327152851325 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 23503 4833 EWERKYREWYE True NCI_RA007_Epitope_Rep2 1672.7634050616 1672.7617649037902 23.423 3 -0.7417174595510347 0.22413484486873508 1.0 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 115417 5273 TVFAAAEE True NCI_RA007_Epitope_Rep3 836.39159850816 836.39050993586 27.745 2 -0.741742883899893 0.22414641786369535 1.0 ['ENSG00000038219|ENST00000040738|BOD1L1', 'BOD1L1|p.E1582Q|1|0.5|ENSG00000038219|chr4:13602156-13602156|C/G|missense_variant'] 59768 10435 LGYLYRKFWFK True PC9_epitope_Rep3 1519.8339912510698 1519.83177987172 45.077 4 -0.7417876511993071 0.2241579905134095 1.0 ['ENSG00000249715|ENST00000624922|FER1L5', 'nc|ENSG00000249715|A0AVI2-4|FER1L5', 'nc|ENSG00000249715|A0AVI2-2|FER1L5'] 39495 10692 HPALSPQLS True PC9_epitope_Rep5 948.5028802926402 948.50178993586 46.117 2 -0.7418110677209838 0.22417779103587143 1.0 ['ENSG00000147234|ENST00000683843|FRMPD3', 'FRMPD3|p.G1413Afs*12|2|0.13|ENSG00000147234|chrX:107602173-107602173|G/-|frameshift_variant'] 64499 11983 LQYLERLYMKR True H1975_Epitope_Rep1 1511.8282542476297 1511.82714993586 51.099 2 -0.7418404018601883 0.22417779103587143 1.0 ['ENST00000560213.1_1_15:99796138-99796378:+|nuORF', 'ENST00000558500.5_1_15:99796138-99837514:+|nuORF', 'nc|ENSG00000168904|Q86X40-2|LRRC28', 'LRRC28|p.A339Qfs*28|1|0.26|ENSG00000168904|chr15:99363248-99363248|G/-|frameshift_variant', 'ENSG00000168904|ENST00000301981|LRRC28'] 97355 6499 SFYIYHLYWWE True H1975_Epitope_Rep1 1605.7292513990099 1605.72760490379 30.059 3 -0.7418583894608971 0.22417779103587143 1.0 ['ENSG00000132017|ENST00000254337|DCAF15'] 69421 6971 LVRENRKYYMD True NCI_RA007_Epitope_Rep2 1485.73983316605 1485.7381949037901 31.737 3 -0.7419159615786777 0.2241842152359363 1.0 ['ENSG00000185129|ENST00000331327|PURA'] 124309 10680 VLDMLFFLNQK True NCI_RA007_Epitope_Rep2 1366.7318942513 1366.73078993586 46.143 2 -0.7419656264583645 0.2241842152359363 1.0 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 68095 7583 LTPDGEYFYSS True H1975_Epitope_Rep3 1277.54519859709 1277.5441099358602 34.149 2 -0.7420278649389589 0.2241842152359363 1.0 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14'] 82439 23368 PVCVLLAWV True PC9_epitope_Rep4 998.5623097450598 998.56120993586 98.141 2 -0.7420371935009868 0.2241842152359363 1.0 ['nc|ENSG00000100678|P57103-3|SLC8A3', 'SLC8A3|p.E535Nfs*35|2|0.17|ENSG00000100678|chr14:70166820-70166820|C/-|frameshift_variant'] 112909 16401 TPQKLPSL True PC9_epitope_Rep3 882.5174677276199 882.51636993586 68.225 2 -0.7420375907324733 0.2241842152359363 1.0 ['ENSG00000185009|ENST00000355264|AP3M1'] 57399 6039 LEHTWRQLRRS True PC9_epitope_Rep2 1480.8011279829998 1480.79947490379 28.621 3 -0.7420640147310426 0.2241842152359363 1.0 ['ENSG00000125731|ENST00000245908|SH2D3A', 'nc|ENSG00000125731|Q9BRG2-2|SH2D3A'] 105691 6081 SVGSTLQPP True H1975_Epitope_Rep3 884.46034677432 884.45924993586 28.403 2 -0.7420650428556683 0.2241842152359363 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 60189 6599 LIAAQEFDP True NCI_RA007_Epitope_Rep2 1002.5022115863 1002.50110993586 30.277 2 -0.7421446948244451 0.22421069899929907 1.0 ['ENSG00000148386|ENST00000619315|LCN9', 'nc|ENSG00000148386|Q8WX39|LCN9'] 63558 22547 LPLDMLCRRL True PC9_epitope_Rep2 1228.6784192098 1228.6773299358601 92.219 2 -0.742150917274209 0.22421223735031393 1.0 ['ENST00000556096.6_1_15:91549780-91550029:-|nuORF'] 91016 24534 RLKLLILGKLL True H1975_Epitope_Rep3 1278.9115132957797 1278.9104099358601 102.1 2 -0.7421593534552364 0.22421223735031393 1.0 ['ABCA7|p.P289L|1|0.3|ENSG00000064687|chr19:1043409-1043409|C/T|missense_variant'] 54892 10393 LAGNQLTRL True PC9_epitope_Rep2 984.5716285588 984.57052993586 45.299 2 -0.7421977173683575 0.22421223735031393 1.0 ['nc|ENSG00000132000|Q6PEZ8-3|PODNL1', 'nc|ENSG00000132000|Q6PEZ8|PODNL1', 'ENSG00000132000|ENST00000588872|PODNL1', 'nc|ENSG00000132000|Q6PEZ8-2|PODNL1'] 56570 7946 LDVTGTHLV True PC9_epitope_Rep4 953.5181960036099 953.51708993586 38.005 2 -0.7422091842825129 0.22421223735031393 1.0 ['nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-2|SKOR1'] 68903 9363 LVERWRPSL True H1975_Epitope_Rep1 1154.6560268890998 1154.65492993586 40.922 2 -0.7422990548788884 0.22422380625726981 1.0 ['ENST00000582260.5_1_18:72163641-72167242:+|nuORF', 'ENST00000324262.8_1_18:72163648-72167242:+|nuORF'] 26569 18312 FIYQNPHIF True PC9_epitope_Rep3 1177.5920296502097 1177.5903749037902 75.644 3 -0.7423202000825532 0.22423537481918906 1.0 ['ENSG00000185238|ENST00000331079|PRMT3', 'nc|ENSG00000185238|O60678-2|PRMT3'] 373 12922 AALCRRKLKRA True H1975_Epitope_Rep3 1284.7924778755998 1284.79084490379 54.932 3 -0.7423764047506523 0.22427007843488114 1.0 ['nc|ENSG00000169635|Q96JB3-2|HIC2', 'ENSG00000169635|ENST00000407464|HIC2'] 106436 13591 SVTVYRWQ True NCI_RA007_Epitope_Rep4 1037.52942939365 1037.52887496793 59.484 1 -0.7423857306737552 0.22427007843488114 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'ENST00000509621.1_3_5:89989878-90055411:+|nuORF'] 34131 20103 GPAVFLVAA True PC9_epitope_Rep4 843.4854393233499 843.48434993586 85.461 2 -0.7423963503381859 0.22427007843488114 1.0 ['ENSG00000119899|ENST00000355773|SLC17A5'] 8401 9662 ATQEVKEITC[Carbamidomethyl]R True H1975_Epitope_Rep3 1333.6659997988797 1333.6649099358601 42.183 2 -0.7424016861174019 0.22427495713114143 1.0 ['GGCT|p.G117V|1|0.23|ENSG00000006625|chr7:30498876-30498876|C/A|missense_variant'] 11004 6 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 0.02719 2 -0.7424025403192569 0.22427495713114143 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 49148 5333 KGKKRKKILPN True NCI_RA007_Epitope_Rep1 1308.8717737421198 1308.8706699358602 24.823 2 -0.7424174311342829 0.22427495713114143 1.0 ['nc|ENSG00000064961|Q9P0W2-3|HMG20B', 'ENSG00000064961|ENST00000333651|HMG20B', 'ENST00000488973.6_1_19:3574329-3578516:+|nuORF', 'ENST00000262949.7_1_19:3573736-3575577:+|nuORF', 'ENST00000486028.1_1_19:3574329-3575756:+|nuORF'] 116103 5093 TVSKISVP True NCI_RA007_Epitope_Rep1 829.49091862661 829.48982993586 23.896 2 -0.7425049223628827 0.22435438659271187 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'TTN|p.H3057Ifs*2|2|0.16|ENSG00000155657|chr2:178768151-178768151|A/-|frameshift_variant', 'TTN|p.P2078Qfs*61|1|0.14|ENSG00000155657|chr2:178775631-178775631|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 93782 6725 RTVEDDLLLQK True H1975_Epitope_Rep1 1328.7299796749996 1328.72833490379 30.911 3 -0.7425141813581462 0.22435438659271187 1.0 ['nc|ENSG00000148690|Q70Z53-2|FRA10AC1', 'nc|ENSG00000148690|Q70Z53-4|FRA10AC1', 'nc|ENSG00000148690|Q70Z53-5|FRA10AC1', 'nc|ENSG00000148690|Q70Z53-3|FRA10AC1', 'ENSG00000148690|ENST00000359204|FRA10AC1'] 82655 19876 PVLQEDHCDS True PC9_epitope_Rep4 1141.47098811101 1141.46988993586 84.585 2 -0.7425250479546445 0.22435438659271187 1.0 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 112009 12758 TLSRERPLP True PC9_epitope_Rep1 1067.60874234351 1067.60764993586 53.947 2 -0.7425379199307647 0.22436260623229462 1.0 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19756247-19758388:-|nuORF', 'nc|ENSG00000105726|Q9HD20-3|ATP13A1', 'ENST00000469641.5_1_19:19756247-19760762:-|nuORF', 'ENST00000467160.1_1_19:19757012-19757291:-|nuORF'] 2399 9460 AEQKKWEEQHE True NCI_RA007_Epitope_Rep5 1440.66335666716 1440.66224993586 43.024 2 -0.7425582543870645 0.22436260623229462 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 97275 12891 SFQFRSRPVAL True PC9_epitope_Rep1 1306.7146043943799 1306.71295490379 54.459 3 -0.7426242060316623 0.22443046278625955 1.0 ['ENST00000522387.5_1_8:101733807-101733969:-|nuORF'] 128050 24747 VRRLGPHG True NCI_RA007_Epitope_Rep5 890.5198677694598 890.5193149679301 102.68 1 -0.7426382113801367 0.22443046278625955 1.0 ['ENST00000569534.5_1_15:73044684-73076051:-|nuORF', 'ENST00000569058.1_1_15:73052730-73076051:-|nuORF'] 114758 5264 TSVSQGLPPP True H1975_Epitope_Rep2 981.5131106231698 981.51200993586 25.316 2 -0.7426969684369708 0.2244353335818114 1.0 ['ENSG00000139218|ENST00000369367|SCAF11', 'nc|ENSG00000139218|Q99590-2|SCAF11'] 62008 23075 LLLRRPPRC True PC9_epitope_Rep5 1122.6808021682998 1122.67915490379 93.743 3 -0.7427019640704713 0.2244353335818114 1.0 ['ENST00000474812.1_1_X:51929763-51929980:+|nuORF'] 135888 17733 YESINYIF True H1975_Epitope_Rep2 1047.4913125494297 1047.4907749679298 73.532 1 -0.7427077475119622 0.2244353335818114 1.0 ['nc|ENSG00000168803|Q6DHV7-3|ADAL', 'ENSG00000168803|ENST00000562188|ADAL', 'ENST00000566154.1_1_15:43643891-43644140:+|nuORF'] 30657 5092 GALGNRPFR True NCI_RA007_Epitope_Rep3 986.5409971368599 986.53990993586 27.021 2 -0.7427612917152516 0.22445845818984153 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant', 'PLXNA3|p.S956Lfs*51|1|0.53|ENSG00000130827|chrX:154466439-154466440|-/T|frameshift_variant'] 65801 14739 LSKAGKLCVP True PC9_epitope_Rep3 1014.5895871220599 1014.58848993586 61.832 2 -0.7427659715020979 0.22445845818984153 1.0 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1', 'nc|ENSG00000158467|Q96HN2-4|AHCYL2', 'nc|ENSG00000158467|Q96HN2-3|AHCYL2', 'CUX1-AHCYL2|1|fusion', 'CUX1-AHCYL2|2|fusion', 'nc|ENSG00000158467|Q96HN2-2|AHCYL2', 'ENSG00000158467|ENST00000325006|AHCYL2', 'ENST00000492628.1_1_7:129040195-129045055:+|nuORF'] 23101 10161 EVLQQVLRLQV True PC9_epitope_Rep1 1323.78743498147 1323.78632993586 43.96 2 -0.7428177947453877 0.22449648921421012 1.0 ['ENSG00000130590|ENST00000369886|SAMD10', 'ENST00000478694.1_1_20:62606865-62609703:-|nuORF'] 99548 24055 SLFAFSLSV True PC9_epitope_Rep5 969.51713337445 969.51602993586 97.51 2 -0.7428230262275899 0.22449648921421012 1.0 ['ENST00000507678.5_1_4:177241188-177241371:+|nuORF', 'ENST00000513139.1_1_4:177241188-177248429:+|nuORF', 'ENSG00000129128|ENST00000503362|SPCS3'] 78600 16786 PDSFNIPGSS True PC9_epitope_Rep3 1019.45598966987 1019.45488993586 69.715 2 -0.7428928308436525 0.22452934249556547 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 115441 12511 TVFILVVSF True PC9_epitope_Rep1 1023.6004690755899 1023.59936993586 52.992 2 -0.7429030705224979 0.22452934249556547 1.0 ['ENST00000333449.8_1_11:62557646-62557730:+|nuORF'] 97103 24369 SFCSFFGG True PC9_epitope_Rep5 850.3319754570599 850.33086993586 98.77 2 -0.7429419375315007 0.22452934249556547 1.0 ['ENSG00000198736|ENST00000361871|MSRB1', 'ENST00000361871.7_2_16:1990815-1993322:-|nuORF'] 77031 14935 NVVHQNKQL True PC9_epitope_Rep2 1078.5883412521 1078.5872499358602 62.707 2 -0.7429671141816035 0.22452934249556547 1.0 ['nc|ENSG00000119844|Q6ULP2-7|AFTPH', 'ENST00000498706.5_1_2:64778608-64806757:+|nuORF', 'nc|ENSG00000119844|Q6ULP2-8|AFTPH', 'nc|ENSG00000119844|Q6ULP2-6|AFTPH', 'ENSG00000119844|ENST00000409933|AFTPH', 'nc|ENSG00000119844|Q6ULP2-9|AFTPH'] 118694 9168 VECEIWLKSK True NCI_RA007_Epitope_Rep2 1233.64274489373 1233.64108490379 40.27 3 -0.7430385632545956 0.22452934249556547 1.0 ['OTUD4|p.Y261C|1|0.34|ENSG00000164164|chr4:145155595-145155595|T/C|missense_variant'] 14461 5511 DTRPQWACTGP True H1975_Epitope_Rep2 1230.5451561107798 1230.5440499358601 26.21 2 -0.7430395655247526 0.22452934249556547 1.0 ['ENST00000398988.7_2_17:25951918-25952683:+|nuORF'] 69327 10916 LVPQKALD True PC9_epitope_Rep1 882.5174677276199 882.51636993586 46.874 2 -0.7430529852214529 0.22452934249556547 1.0 ['ENST00000593099.5_1_17:33325156-33325826:+|nuORF'] 46090 7940 ISYSPLQSDE True H1975_Epitope_Rep1 1137.51898384925 1137.51788993586 35.49 2 -0.7430633256150216 0.22452934249556547 1.0 ['ENSG00000198924|ENST00000361384|DCLRE1A'] 130004 19256 VTPLVELQ True PC9_epitope_Rep5 897.5171333744499 897.51602993586 79.109 2 -0.7431185387523798 0.2245558072978774 1.0 ['nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|O94854-4|MACF1'] 330 8904 AAIKGNQESVK True PC9_epitope_Rep6 1143.62478633047 1143.62368993586 44.213 2 -0.7431556742317202 0.22456736573804945 1.0 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 69939 10391 LYDYFWWE True H1975_Epitope_Rep2 1220.5178616504402 1220.5162049037901 44.98 3 -0.7431691086134511 0.22457222917784533 1.0 ['ENSG00000143418|ENST00000368954|CERS2'] 17947 16132 EIEREREL True PC9_epitope_Rep1 1072.5512870370399 1072.55018993586 66.868 2 -0.7431838306101144 0.22457222917784533 1.0 ['ENSG00000113141|ENST00000417647|IK', 'ENST00000434096.1_1_2:58688403-58689123:-|nuORF'] 107963 8170 TC[Carbamidomethyl]ECVFPPAYT True H1975_Epitope_Rep1 1286.5311461188496 1286.53004993586 36.367 2 -0.7431943927295992 0.22457222917784533 1.0 ['ENST00000599420.5_1_19:17312953-17313848:+|nuORF'] 107825 2698 TAQSQVQMKK True NCI_RA007_Epitope_Rep2 1147.6019427109097 1147.6003049037902 14.721 3 -0.7432055801325227 0.22458378668415482 1.0 ['nc|ENSG00000133895|O00255-3|MEN1', 'ENSG00000133895|ENST00000450708|MEN1', 'nc|ENSG00000133895|O00255-1|MEN1'] 137663 2718 YLYRHKYENYR True NCI_RA007_Epitope_Rep2 1603.7895602397898 1603.78737987172 14.799 4 -0.7432161460926964 0.22459534384594748 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644'] 122022 11936 VGQKRWYRG True NCI_RA007_Epitope_Rep3 1148.6203100867199 1148.6186549037902 54.077 3 -0.7432613178592815 0.22462180490349504 1.0 ['ENST00000309575.4_1_3:142838724-142839039:+|nuORF'] 99480 6712 SLEPRQHFN True NCI_RA007_Epitope_Rep3 1126.5519557433802 1126.55084993586 33.488 2 -0.7433112488748851 0.22462331778416966 1.0 ['ENSG00000170485|ENST00000335681|NPAS2', 'ENST00000474550.5_1_2:101587368-101598935:+|nuORF'] 22692 11158 ETVELHKLKL True NCI_RA007_Epitope_Rep2 1208.71287305888 1208.71176993586 47.984 2 -0.7433573541420765 0.22462331778416966 1.0 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 49270 4338 KHFTVAQNER True NCI_RA007_Epitope_Rep2 1228.63126869324 1228.62961490379 21.51 3 -0.7433853904953573 0.22462331778416966 1.0 ['nc|ENSG00000198075|O75897-2|SULT1C4', 'ENSG00000198075|ENST00000272452|SULT1C4'] 12447 6539 DKLPLFKRQYE True PC9_epitope_Rep2 1435.7823496010299 1435.78069490379 30.566 3 -0.7433893282108412 0.22462331778416966 1.0 ['ENSG00000112996|ENST00000507110|MRPS30'] 54522 9627 LAAGARKC True PC9_epitope_Rep1 788.4326925578399 788.43158993586 41.885 2 -0.7434225048209199 0.22465128755364808 1.0 ['HOMER1-DMGDH|1|fusion', 'ENSG00000132837|ENST00000255189|DMGDH'] 10990 12458 DDDGGSPL True PC9_epitope_Rep3 774.30317742658 774.30208993586 52.944 2 -0.7434316963588677 0.22465128755364808 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 11354 17761 DFEDVWKR True PC9_epitope_Rep6 1093.51925863277 1093.5181699358602 80.951 2 -0.7434349738753351 0.22465128755364808 1.0 ['TLE6|p.A257V|2|0.36|ENSG00000104953|chr19:2989090-2989090|C/T|missense_variant'] 96097 7428 SEDNDEPGDED True H1975_Epitope_Rep3 1220.3952994577598 1220.39420993586 33.549 2 -0.7434410828608932 0.22465128755364808 1.0 ['nc|ENSG00000186487|Q9UL68-4|MYT1L', 'ENSG00000186487|ENST00000647738|MYT1L', 'MYT1L|p.D985Tfs*4|1|0.71|ENSG00000186487|chr2:1839274-1839274|C/-|frameshift_variant', 'MYT1L|p.G672Dfs*30|1|0.12|ENSG00000186487|chr2:1903096-1903096|G/-|frameshift_variant'] 9502 13439 AWEKIDKLHS True PC9_epitope_Rep5 1225.64552177505 1225.6444299358602 56.71 2 -0.7434676919179566 0.22465128755364808 1.0 ['MINDY4|p.W431*|2|0.17|ENSG00000106125|chr7:30839252-30839252|G/-|frameshift_variant', 'ENSG00000106125|ENST00000265299|MINDY4', 'ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 131038 17556 VVLLRARPVI True PC9_epitope_Rep2 1134.76009803482 1134.7584449037902 72.802 3 -0.743527870429255 0.22465949393496856 1.0 ['ENSG00000144668|ENST00000264741|ITGA9'] 78498 5282 PDGLCQVSLQQ True H1975_Epitope_Rep3 1186.5652228490198 1186.5641299358601 25.399 2 -0.7435336053273882 0.22465949393496856 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'ENST00000370691.6_1_20:60885298-60889553:-|nuORF'] 32797 7309 GIEDISPNLSP True H1975_Epitope_Rep2 1140.5662683948399 1140.56516993586 33.053 2 -0.7435680770928601 0.22467104772974503 1.0 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000411772.5_2_15:43699583-43738985:-|nuORF', 'ENST00000572085.5_1_15:43707600-43785241:-|nuORF', 'nc|ENSG00000067369|Q12888-3|TP53BP1', 'ENST00000571145.1_1_15:43708608-43712911:-|nuORF'] 82495 10130 PVEPEPTP True PC9_epitope_Rep1 864.42289863644 864.42180993586 43.839 2 -0.7435872883483242 0.22467590523021905 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 97310 18609 SFSKRFFSEHV True PC9_epitope_Rep1 1369.67788453249 1369.6767899358601 76.367 2 -0.7435948630728835 0.22467590523021905 1.0 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 124286 11531 VLDEPTSGVDP True PC9_epitope_Rep1 1127.53463391339 1127.53297490379 49.234 3 -0.7435990853957266 0.22467590523021905 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13', 'ENST00000484268.1_1_7:48352666-48443694:+|nuORF'] 42394 8893 IENQGVTDFK True NCI_RA007_Epitope_Rep1 1149.56660274801 1149.56550993586 38.593 2 -0.7436457284952096 0.2247023587787397 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.N3720Kfs*28|2|0.54|ENSG00000157423|chr16:70868720-70868721|-/T|frameshift_variant'] 111071 9203 TLEAGNYGSLL True PC9_epitope_Rep5 1136.57135377528 1136.5702499358601 40.346 2 -0.7437179995834866 0.224758612468709 1.0 ['BRWD3|p.P1387L|1|0.51|ENSG00000165288|chrX:80684083-80684083|G/A|missense_variant'] 12819 18041 DLKIGYECLCP True PC9_epitope_Rep2 1252.58318141228 1252.58208993586 74.7 2 -0.743775179291785 0.22476681467354054 1.0 ['nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'nc|ENSG00000130164|P01130-6|LDLR', 'nc|ENSG00000130164|P01130-4|LDLR'] 92704 17114 RRHSEWVP True H1975_Epitope_Rep2 1065.54681079329 1065.54570993586 71.104 2 -0.7437843523553919 0.22476681467354054 1.0 ['ENST00000588005.5_1_17:74569291-74570473:-|nuORF'] 96096 7364 SEDNDEPGDED True H1975_Epitope_Rep2 1220.3952994577598 1220.39420993586 33.265 2 -0.7438398891109593 0.22477501638953454 1.0 ['nc|ENSG00000186487|Q9UL68-4|MYT1L', 'ENSG00000186487|ENST00000647738|MYT1L', 'MYT1L|p.D985Tfs*4|1|0.71|ENSG00000186487|chr2:1839274-1839274|C/-|frameshift_variant', 'MYT1L|p.G672Dfs*30|1|0.12|ENSG00000186487|chr2:1903096-1903096|G/-|frameshift_variant'] 82470 19320 PVDTRERGLK True PC9_epitope_Rep4 1169.6516697846498 1169.6500349037901 82.421 3 -0.7438726817767182 0.22477501638953454 1.0 ['ENSG00000274588|ENST00000611977|DGKK'] 131415 22974 VVTLILLLLL True NCI_RA007_Epitope_Rep1 1108.783518818 1108.7824299358601 94.362 2 -0.7440299471989217 0.22484281414821658 1.0 ['nc|ENSG00000122223|Q9BZW8-4|CD244', 'nc|ENSG00000122223|Q9BZW8-3|CD244', 'ENSG00000122223|ENST00000368034|CD244', 'nc|ENSG00000122223|Q9BZW8|CD244'] 96577 7300 SELQPKAK True NCI_RA007_Epitope_Rep2 899.5076313199099 899.50652993586 33.015 2 -0.744045586453735 0.22484281414821658 1.0 ['ENST00000551688.1_1_12:101790345-101801520:-|nuORF', 'ENST00000539055.5_1_12:101796714-101801520:-|nuORF', 'ENST00000551092.5_1_12:101799623-101801520:-|nuORF', 'ENST00000261636.12_1_12:101796714-101801562:-|nuORF'] 13671 11351 DQDKYRYRYPK True NCI_RA007_Epitope_Rep2 1530.75792575834 1530.7568299358602 48.744 2 -0.7440971113371032 0.22486926205694363 1.0 ['ENSG00000114268|ENST00000232375|PFKFB4', 'nc|ENSG00000114268|Q16877-3|PFKFB4', 'ENST00000417753.5_1_3:48557182-48594149:-|nuORF', 'PFKFB1|p.A402Gfs*6|1|0.34|ENSG00000158571|chrX:54937620-54937621|-/A|frameshift_variant', 'nc|ENSG00000158571|P16118-2|PFKFB1', 'ENSG00000158571|ENST00000375006|PFKFB1'] 13607 18479 DPSITSILD True PC9_epitope_Rep1 959.48114178855 959.4805949679301 75.871 1 -0.7441894532852261 0.22492550655542312 1.0 ['ENSG00000158516|ENST00000222481|CPA2'] 89809 24723 RFFFFFFFSYY True H1975_Epitope_Rep1 1616.7492585675998 1616.74816993586 102.41 2 -0.7443008312356098 0.22497839754476923 1.0 ['chr7:50504059-50513259|115|12.32|0.0|20.23|-|2|TE_info:L1PB1,L1PB1_dup5738,L1,LINE,donor,+,50513259,50517927|DDC,None|3'] 4325 11010 AILTFRLPYC True NCI_RA007_Epitope_Rep1 1195.6423509709098 1195.64071490379 46.822 3 -0.7443059009648645 0.22497839754476923 1.0 ['ENSG00000169208|ENST00000641040|OR10G3'] 75600 9419 NQRWEWLAWWR True NCI_RA007_Epitope_Rep2 1629.7953143265697 1629.7942099358602 41.249 2 -0.7443678259138523 0.2249962758826158 1.0 ['ENST00000465124.1_1_9:127634977-127635226:+|nuORF'] 12099 15096 DIFNNQLKELR True H1975_Epitope_Rep1 1388.7412130650398 1388.7401099358601 63.321 2 -0.7443965822949218 0.2249962758826158 1.0 ['nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528'] 3681 2648 AGRRWGQARP True NCI_RA007_Epitope_Rep5 1153.6217070690495 1153.62007490379 14.874 3 -0.7443980835533828 0.2249962758826158 1.0 ['ENST00000573951.1_1_16:3313772-3314576:+|nuORF'] 111208 11283 TLFRGLRV True PC9_epitope_Rep2 960.5868847001199 960.58578993586 48.725 2 -0.74446684893936 0.2249962758826158 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 45271 10340 IRYSFQVP True NCI_RA007_Epitope_Rep4 1008.5392658013599 1008.5386749679301 46.629 1 -0.7444860051409824 0.2249962758826158 1.0 ['nc|ENSG00000124731|Q9NP99-3|TREM1', 'ENST00000589882.1_1_6:41248622-41249060:-|nuORF'] 128831 4204 VSSEQVLK True NCI_RA007_Epitope_Rep5 888.4916469025999 888.49054993586 22.702 2 -0.7445867668120368 0.2249962758826158 1.0 ['ENSG00000104267|ENST00000285379|CA2'] 7851 6995 ATALASDP True NCI_RA007_Epitope_Rep4 744.36538376032 744.36483496793 33.532 1 -0.7445935167550504 0.2249962758826158 1.0 ['ENSG00000067182|ENST00000162749|TNFRSF1A', 'nc|ENSG00000067182|P19438-3|TNFRSF1A', 'ENST00000536717.5_1_12:6438480-6440154:-|nuORF', 'nc|ENSG00000067182|P19438-2|TNFRSF1A'] 69886 5357 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True H1975_Epitope_Rep1 1442.6356288295895 1442.6345299358602 25.664 2 -0.744594958518511 0.2249962758826158 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 116066 6456 TVRYAPSEAGL True NCI_RA007_Epitope_Rep5 1162.5982372294598 1162.5965849037902 31.498 3 -0.7446255328941191 0.2250044688077221 1.0 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'ENST00000490936.5_1_X:153579531-153588003:-|nuORF'] 119952 19176 VEYLIKESP True PC9_epitope_Rep3 1076.57537652656 1076.57426993586 78.979 2 -0.7446271775623217 0.2250044688077221 1.0 ['CON__Q58D62', 'FETUB|p.C216S|1|0.06|ENSG00000090512|chr3:186646299-186646299|T/A|missense_variant', 'chr3:186636228-186644751|219|21.69|0.49|5.47|+|ENST00000431018|FETUB,FETUB', 'nc|ENSG00000090512|Q9UGM5-2|FETUB', 'chr3:186636228-186640460|232|26.12|0.55|5.57|+|ENST00000450521|FETUB,FETUB', 'ENSG00000090512|ENST00000265029|FETUB'] 42843 18198 IFLTNGRTL True PC9_epitope_Rep2 1033.59202965021 1033.59092993586 75.305 2 -0.7446729594613162 0.22504580459684506 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'ENST00000473037.5_1_1:235826242-235897989:-|nuORF', 'ENST00000475277.1_1_1:235876468-235887465:-|nuORF'] 18726 15806 ELDKSFRLTRF True H1975_Epitope_Rep3 1410.76194850962 1410.76084993586 66.246 2 -0.7447092002102714 0.2250506434699714 1.0 ['nc|ENSG00000086475|P49903-2|SEPHS1', 'nc|ENSG00000086475|P49903-4|SEPHS1', 'ENSG00000086475|ENST00000327347|SEPHS1'] 948 10955 ADVWSFGVL True PC9_epitope_Rep5 992.4967322830398 992.49562993586 47.128 2 -0.7447366282332512 0.2250506434699714 1.0 ['ENST00000526097.1_1_8:11418120-11421614:+|nuORF', 'ENSG00000136573|ENST00000259089|BLK'] 95736 5110 SCCECGCG True NCI_RA007_Epitope_Rep1 760.1648527559199 760.16374993586 23.961 2 -0.7447544930511313 0.2250506434699714 1.0 ['nc|ENSG00000145242|P54756-3|EPHA5', 'nc|ENSG00000145242|P54756|EPHA5'] 82261 17188 PTLSRKDHFP True PC9_epitope_Rep1 1196.63020606408 1196.62910993586 70.934 2 -0.7447921679621126 0.22506218627582406 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.K736Rfs*16|1|0.7|ENSG00000176927|chr17:30055895-30055895|A/-|frameshift_variant'] 69986 18265 LYFCLHFVI True PC9_epitope_Rep5 1153.5994235297699 1153.5983299358602 75.272 2 -0.7448079735649035 0.22507037638332414 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|239|3|anti-sense'] 92479 523 RRAGEAHRRHR True PC9_epitope_Rep3 1400.7722278965598 1400.77112993586 2.9015 2 -0.7448113937691786 0.22507037638332414 1.0 ['ENST00000450917.1_1_2:3523256-3523661:+|nuORF'] 80605 8137 PLPFFCFP True H1975_Epitope_Rep3 966.4673467310598 966.46624993586 36.276 2 -0.7449701727192728 0.22507856600288945 1.0 ['chr1:245814415-245816795|376|16.24|0.01|10.82|-|1|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|88', 'chr1:245764149-245816795|362|34.57|0.05|9.58|-|1|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|88'] 110507 8210 TIQEYQRY True H1975_Epitope_Rep3 1099.52982331647 1099.5287299358602 36.562 2 -0.7450227243254716 0.22507856600288945 1.0 ['ENST00000555759.1_1_14:95918480-95934190:-|nuORF'] 41507 7617 IDAHVPAATP True NCI_RA007_Epitope_Rep4 990.5134449763399 990.51234993586 35.953 2 -0.7451018933108646 0.22511989514759762 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 23032 8244 EVKKMCMYKYP True H1975_Epitope_Rep3 1418.6760362512998 1418.67492993586 36.694 2 -0.7451727205519553 0.2251213772972329 1.0 ['ENSG00000164163|ENST00000296577|ABCE1'] 31651 12609 GEHLCPAAL True PC9_epitope_Rep3 909.4378375079299 909.43674993586 53.523 2 -0.7452095213531509 0.2251213772972329 1.0 ['chr4:15790918-15816511|135|20.32|0.09|7.8|+|2|TE_info:SVA_D,SVA_D_dup355,SVA,Retroposon,donor,+,15790204,15790918|None,CD38|7'] 30751 8547 GAPAEELLQ True H1975_Epitope_Rep3 926.4709114580198 926.4703649679301 37.864 1 -0.7452169552966597 0.2251213772972329 1.0 ['OCA2|p.V17E|1|0.11|ENSG00000104044|chr15:28081825-28081825|A/T|missense_variant'] 6411 16939 APSFAPSSSV True PC9_epitope_Rep1 948.45526139388 948.45416993586 69.979 2 -0.745217888165169 0.2251213772972329 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 77667 4649 PAAAAAAAPD True PC9_epitope_Rep4 824.4028318981999 824.40172993586 24.403 2 -0.7452219397960088 0.22512956454399238 1.0 ['ENST00000246006.4_1_20:23066758-23066941:-|nuORF'] 78611 15241 PDSGHVRLRL True NCI_RA007_Epitope_Rep2 1148.64143945412 1148.64034993586 63.978 2 -0.7452231859186211 0.22512956454399238 1.0 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16', 'CDH16|p.K563Qfs*41|1|0.1|ENSG00000166589|chr16:66912002-66912003|-/G|frameshift_variant'] 74679 14397 NLIEKMDDNL True NCI_RA007_Epitope_Rep5 1203.58053855999 1203.57944993586 62.061 2 -0.7452909667304438 0.22514110411175148 1.0 ['ENSG00000177034|ENST00000512528|MTX3', 'nc|ENSG00000177034|Q5HYI7-5|MTX3'] 115273 11759 TVDLNRVLN True PC9_epitope_Rep5 1042.5771078620598 1042.5760099358602 50.229 2 -0.7453979271446248 0.2251641822161993 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630', 'ENSG00000094796|ENST00000251645|KRT31', 'CON__Q9UE12', 'CON__Q15323'] 100966 5207 SLSSPWEQDHR True NCI_RA007_Epitope_Rep1 1340.61092717148 1340.60929490379 24.337 3 -0.7454020104155874 0.2251641822161993 1.0 ['ENST00000451540.1_1_13:75812162-75812900:-|nuORF'] 85576 9574 QLLLLLWLC True H1975_Epitope_Rep1 1113.66202378633 1113.6609299358602 41.749 2 -0.7454574581952386 0.22519061234214915 1.0 ['ENST00000454498.6_1_8:19363479-19448754:-|nuORF'] 24896 16274 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 67.411 2 -0.7455054765900786 0.22519209005896718 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 83272 7458 QAETLAKFREN True H1975_Epitope_Rep2 1305.66771377161 1305.6666099358602 33.634 2 -0.7455199289009525 0.22519209005896718 1.0 ['ENSG00000100012|ENST00000215812|SEC14L3'] 118768 9863 VEDSWAMEA True H1975_Epitope_Rep2 1036.4171616329998 1036.4160699358602 42.924 2 -0.7455273708252855 0.22519209005896718 1.0 ['ENSG00000119401|ENST00000450136|TRIM32'] 134477 20895 WTRRRRRQPRR True PC9_epitope_Rep6 1622.9566746212997 1622.95556993586 93.144 2 -0.7455452280569228 0.22519209005896718 1.0 ['ENST00000588173.1_1_19:13264262-13264382:+|nuORF'] 64368 9789 LQPSLPHTGA True PC9_epitope_Rep2 1019.53999407735 1019.53888993586 42.99 2 -0.7456005717902582 0.22523823704586063 1.0 ['ENST00000397420.7_1_11:838599-838812:+|nuORF'] 140258 20128 YWYNYEILKKW True NCI_RA007_Epitope_Rep2 1604.8027506924395 1604.80164993586 83.299 2 -0.7456207933625385 0.22523823704586063 1.0 ['ENSG00000075303|ENST00000341119|SLC25A40'] 112884 11198 TPPPGLASA True PC9_epitope_Rep5 809.42831837005 809.4272299358599 48.061 2 -0.745625154534467 0.22523823704586063 1.0 ['ENST00000367202.8_1_1:204120934-204121090:-|nuORF'] 99203 10228 SLATTLTKI True PC9_epitope_Rep6 946.5698972233 946.56880993586 49.994 2 -0.7456361126302306 0.22523823704586063 1.0 ['ENSG00000129083|ENST00000439561|COPB1', 'ENST00000526191.1_1_11:14496007-14497407:-|nuORF'] 85298 25170 QKVWKRWKKRY True PC9_epitope_Rep6 1604.9415846374395 1604.9399249037901 111.99 3 -0.745670712408436 0.22525272074915512 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 60575 9681 LIRIYYWYWRR True NCI_RA007_Epitope_Rep4 1686.91470118326 1686.9136099358602 44.087 2 -0.7456763545325337 0.22525272074915512 1.0 ['ENSG00000163686|ENST00000478253|ABHD6'] 63066 15237 LNLDIGYFL True PC9_epitope_Rep5 1066.5698972233001 1066.5688099358601 63.618 2 -0.7456836325777537 0.22525272074915512 1.0 ['ENST00000535011.6_1_7:128411412-128411451:+|nuORF'] 109065 11810 TFDLYDDWMRA True H1975_Epitope_Rep2 1431.61290131743 1431.61126490379 50.503 3 -0.745732865948533 0.22525272074915512 1.0 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1', 'ENST00000466097.1_1_22:38042800-38046733:+|nuORF'] 80755 8825 PLSAHALS True H1975_Epitope_Rep2 794.42865272322 794.42754993586 38.912 2 -0.7457621076708948 0.22525272074915512 1.0 ['FRY|p.M2908Cfs*5|1|0.3|ENSG00000073910|chr13:32294509-32294509|A/-|frameshift_variant', 'ENSG00000073910|ENST00000542859|FRY'] 68357 7233 LTSLPQQLP True H1975_Epitope_Rep3 995.5651461960299 995.56404993586 32.793 2 -0.7457761058266097 0.22525272074915512 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 116348 14125 TVYDRTTVL True PC9_epitope_Rep4 1066.5658744720201 1066.56476993586 62.236 2 -0.7457792058604555 0.22525272074915512 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 71789 2428 MNMKKSHEVQA True PC9_epitope_Rep3 1301.62202653249 1301.62039490379 13.395 3 -0.7457958186374225 0.22525272074915512 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'ENSG00000127720|ENST00000248306|METTL25'] 108194 7836 TDWILERDP True H1975_Epitope_Rep1 1143.5560380643099 1143.5549499358601 35.091 2 -0.7457989936602029 0.22525272074915512 1.0 ['ENSG00000153140|ENST00000283122|CETN3'] 18359 8268 EIYFLNNK True NCI_RA007_Epitope_Rep2 1039.53384606775 1039.53274993586 36.799 2 -0.7458322631652479 0.2252575477877687 1.0 ['Tigger1_dup3188|chr4:76920080-76921080:-|1.2529691912903969|0.285655789289939|2.13|501.0|60|3|anti-sense'] 32540 16396 GGTDFPAAQT True PC9_epitope_Rep1 963.4297749220299 963.42922496793 67.89 1 -0.7458649574165731 0.2252575477877687 1.0 ['nc|ENSG00000144749|Q96JA1-2|LRIG1'] 34058 17376 GNRHARRV True NCI_RA007_Epitope_Rep5 964.54272847236 964.54162993586 73.617 2 -0.745881758411234 0.2252575477877687 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 19821 2773 ELTSAGLPAP True H1975_Epitope_Rep2 954.5022115863 954.50110993586 14.696 2 -0.7459134325734851 0.2252657278113556 1.0 ['ENST00000416675.5_1_7:100450451-100456466:+|nuORF'] 53045 9110 KRYAWKRRWFV True NCI_RA007_Epitope_Rep2 1594.8997198254597 1594.8980849037903 40.041 3 -0.7459191666525158 0.2252657278113556 1.0 ['nc|ENSG00000109458|Q13480-2|GAB1', 'ENSG00000109458|ENST00000262994|GAB1', 'GAB1|p.P311Qfs*24|1|0.19|ENSG00000109458|chr4:143438336-143438336|C/-|frameshift_variant'] 99309 7674 SLDLEGESV True PC9_epitope_Rep5 947.44475627983 947.44364993586 34.462 2 -0.7459396444455855 0.22527390734786235 1.0 ['nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1'] 63344 19794 LPEKRRTRA True PC9_epitope_Rep5 1125.67307393557 1125.67196993586 81.183 2 -0.7459555401708351 0.22527390734786235 1.0 ['ENST00000605833.1_1_10:17258248-17271432:-|nuORF'] 98662 13415 SIPVFKTEWIM True H1975_Epitope_Rep1 1349.70534515029 1349.7042499358602 56.714 2 -0.7459967248880497 0.2252854399571282 1.0 ['nc|ENSG00000152556|P08237-3|PFKM'] 61751 9801 LLIYDNNKRP True H1975_Epitope_Rep3 1244.6877209402 1244.68662993586 42.726 2 -0.74602848685935 0.2252969722230492 1.0 ['nc|ENSG00000211644|P01701|IGLV1-51'] 80874 17101 PLVSQSQPV True PC9_epitope_Rep6 953.5181960036099 953.51708993586 78.354 2 -0.7460475623926283 0.22530850414564074 1.0 ['ENSG00000182197|ENST00000378204|EXT1'] 109368 19429 TGIWQSIDV True PC9_epitope_Rep4 1017.5131106231698 1017.51200993586 82.846 2 -0.7462203597874076 0.22540934802024412 1.0 ['ENSG00000138379|ENST00000260950|MSTN'] 79754 16645 PHSYNQLS True PC9_epitope_Rep3 944.4351946556401 944.43408993586 69.161 2 -0.7462531641181601 0.22541227600166697 1.0 ['ENST00000260818.10_1_3:132211341-132211380:+|nuORF'] 30345 16566 GAEARVFRG True PC9_epitope_Rep5 961.5093626554099 961.50826993586 68.725 2 -0.7462801060162988 0.22541227600166697 1.0 ['ENSG00000172315|ENST00000372114|TP53RK'] 114702 13726 TSSRAFLL True PC9_epitope_Rep6 893.4970666362099 893.49596993586 64.584 2 -0.7463026715601865 0.22541227600166697 1.0 ['ENST00000505667.5_1_4:169432617-169432773:+|nuORF'] 85299 25232 QKVWKRWKKRY True PC9_epitope_Rep6 1604.9415846374395 1604.9399249037901 112.33 3 -0.7463056370672652 0.22541227600166697 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2'] 54536 9461 LAALGDPRATP True PC9_epitope_Rep6 1080.5927579262 1080.5916699358602 46.631 2 -0.7463464849669944 0.22541227600166697 1.0 ['ENST00000529593.1_1_8:146277868-146278266:+|nuORF', 'ENST00000524395.5_1_8:146277868-146278117:+|nuORF'] 93463 8251 RSEQVLGSWP True H1975_Epitope_Rep3 1157.58292151849 1157.58182993586 36.723 2 -0.7463527763577701 0.22541227600166697 1.0 ['ENST00000482360.5_1_1:6645916-6646228:+|nuORF'] 27548 20056 FPKKELELQIG True PC9_epitope_Rep2 1300.7390878067197 1300.73798993586 82.552 2 -0.746354977634504 0.22541227600166697 1.0 ['ENSG00000123561|ENST00000372563|SERPINA7'] 62912 13618 LMVQPAAP True H1975_Epitope_Rep3 825.4418602592099 825.4413149679301 57.669 1 -0.7463814851946955 0.22541227600166697 1.0 ['MAGEL2|p.Q863Rfs*41|1|0.27|ENSG00000254585|chr15:23645156-23645156|G/-|frameshift_variant', 'MAGEL2|p.Q863Pfs*45|1|0.15|ENSG00000254585|chr15:23645155-23645156|-/G|frameshift_variant', 'MAGEL2|p.H1085Qfs*21|2|0.21|ENSG00000254585|chr15:23644488-23644488|G/-|frameshift_variant', 'ENSG00000254585|ENST00000650528|MAGEL2'] 60567 4128 LIRDSESSP True NCI_RA007_Epitope_Rep3 1002.49818883502 1002.49708993586 22.793 2 -0.7464651239631837 0.22542862245505418 1.0 ['ENSG00000071051|ENST00000233154|NCK2', 'ENSG00000158092|ENST00000481752|NCK1', 'nc|ENSG00000158092|P16333-2|NCK1'] 1656 4192 AEGEGWRRPQ True NCI_RA007_Epitope_Rep2 1184.56866843668 1184.56756993586 20.946 2 -0.74646590356702 0.22542862245505418 1.0 ['ENST00000308020.5_1_11:490638-491184:+|nuORF'] 124630 14583 VLIATSTLAWG True PC9_epitope_Rep1 1130.63356010902 1130.6324699358602 60.916 2 -0.7464783648072559 0.22542862245505418 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 6783 5601 AQFAHSYEFY True H1975_Epitope_Rep3 1261.54038800017 1261.53874490379 26.584 3 -0.7464841263147386 0.22542862245505418 1.0 115231 6056 TVCWITCR True H1975_Epitope_Rep1 980.45719305352 980.45608993586 28.367 2 -0.7465216742537509 0.2254449669623192 1.0 ['ENST00000438773.2_1_8:141294057-141294090:-|nuORF'] 98185 11315 SIDNYYRLVTT True H1975_Epitope_Rep1 1343.6721304457099 1343.6710299358601 48.501 2 -0.7465274025460015 0.2254449669623192 1.0 ['nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7', 'ENSG00000253537|ENST00000518325|PCDHGA7'] 106617 12876 SWMLVMEM True H1975_Epitope_Rep2 1025.43843175489 1025.4373299358601 54.639 2 -0.7465449377866409 0.2254449669623192 1.0 ['nc|ENSG00000165025|P43405-2|SYK', 'ENSG00000165025|ENST00000375754|SYK'] 110614 22590 TITKMLKAI True PC9_epitope_Rep5 1017.6256382776098 1017.62454993586 91.89 2 -0.7465752232401466 0.2254449669623192 1.0 ['ENSG00000079101|ENST00000692774|CLUL1'] 25034 18498 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 79.225 2 -0.7466889855191072 0.22545649359346398 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 109870 9463 THMTAIVGM-[Oxidation] True PC9_epitope_Rep1 975.4517737003499 975.45066993586 41.255 2 -0.7467542332681695 0.2254680198815441 1.0 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 2395 9331 AEQKKWEEQHE True H1975_Epitope_Rep1 1440.66335666716 1440.66224993586 40.799 2 -0.7467650394077144 0.22547283522566627 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 72184 9824 MRRAPTAWAA True PC9_epitope_Rep2 1129.58148204985 1129.5798449037902 43.123 3 -0.7468286454838756 0.22547283522566627 1.0 ['ENST00000424347.6_2_9:80851018-80851090:+|nuORF'] 21041 20690 ERDEIPHNDI True PC9_epitope_Rep4 1236.5734790336 1236.5723899358602 87.744 2 -0.74683131626952 0.22547283522566627 1.0 ['nc|ENSG00000148702|Q14520-2|HABP2', 'ENSG00000148702|ENST00000351270|HABP2'] 34062 22501 GNRHARRV True PC9_epitope_Rep3 964.54272847236 964.54162993586 91.825 2 -0.7468838710474992 0.2255107658884276 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 18443 20276 EKHGLVIIP True H1975_Epitope_Rep2 1004.6018660579199 1004.60076993586 84.028 2 -0.7469049847409697 0.2255107658884276 1.0 ['ENSG00000093167|ENST00000336686|LRRFIP2', 'nc|ENSG00000093167|Q9Y608-2|LRRFIP2', 'nc|ENSG00000093167|Q9Y608-4|LRRFIP2'] 99958 12233 SLIMQDDP True H1975_Epitope_Rep2 917.41643335701 917.41532993586 52.137 2 -0.7469331963953527 0.22551557896616373 1.0 ['ENSG00000144407|ENST00000272847|PTH2R', 'chr2:208360237-208428201|217|15.18|0.52|4.88|+|ENST00000617735|PTH2R,PTH2R'] 95719 3675 SCCCCCCC True PC9_epitope_Rep1 826.10688658094 826.10578993586 19.054 2 -0.7469502268378423 0.22551557896616373 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 89886 8778 RFQNSLKEL True PC9_epitope_Rep4 1133.61930702721 1133.61766490379 41.277 3 -0.7469520125421621 0.22551557896616373 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 122282 9754 VGRSFEPIIK True PC9_epitope_Rep6 1144.6604435631998 1144.65880490379 47.948 3 -0.7469969632071166 0.22552039161421833 1.0 ['nc|ENSG00000179988|Q8IV42-2|PSTK'] 15304 14735 EAILDITD True PC9_epitope_Rep1 888.44402800384 888.44292993586 61.497 2 -0.7470032396805423 0.22552039161421833 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 45032 5914 IQMKEAQTQ True NCI_RA007_Epitope_Rep1 1075.5331944447498 1075.53208993586 27.055 2 -0.7470175242043456 0.22552039161421833 1.0 ['HEATR3|p.E299Q|2|0.23|ENSG00000155393|chr16:50078872-50078872|G/C|missense_variant'] 55601 20243 LCQWRRRQRRR True NCI_RA007_Epitope_Rep1 1612.9069475475599 1612.90531490379 82.945 3 -0.7471495285283067 0.22554489325299412 1.0 ['ENST00000370332.5_1_1:92949124-92949509:-|nuORF'] 134968 11259 YAFWGAASF True PC9_epitope_Rep2 1018.4548674710599 1018.45376993586 48.633 2 -0.7471802960968209 0.22554489325299412 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 51969 9644 KKWWRRKYLEF True H1975_Epitope_Rep3 1638.9147011832595 1638.9130649037902 42.112 3 -0.747199829264385 0.22554489325299412 1.0 ['ENST00000433473.7_1_1:40558092-40558149:-|nuORF'] 137925 12447 YPRM[Oxidation]QVTV True PC9_epitope_Rep6 1008.50625180136 1008.50514993586 59.305 2 -0.7472504186238456 0.22554489325299412 1.0 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 45609 10607 ISGTVDMQSN True H1975_Epitope_Rep3 1050.46517445458 1050.4640699358602 45.868 2 -0.7472631183399976 0.22554489325299412 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 27403 9333 FNDGNAAVV True PC9_epitope_Rep6 905.4242956187699 905.42374496793 46.081 1 -0.7472799121792931 0.22554489325299412 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 60853 5340 LKLRPRIRPRR True H1975_Epitope_Rep1 1459.9688024447898 1459.96770993586 25.603 2 -0.7472927428263506 0.22555641513925256 1.0 ['ENSG00000270765|ENST00000604641|GAS2L2'] 92905 25318 RRPFWKRRK True PC9_epitope_Rep3 1328.8054255177997 1328.80487496793 102.8 1 -0.7473042944995208 0.22556793668268443 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7'] 127167 7179 VQESGDRHQLR True H1975_Epitope_Rep3 1323.66435972667 1323.6632699358602 32.589 2 -0.747387499506658 0.22558762273132996 1.0 ['ENST00000576921.1_1_16:3073594-3073723:-|nuORF'] 130560 12770 VTYLLSFWFFY True H1975_Epitope_Rep3 1484.7380251775598 1484.7369299358602 54.334 2 -0.747455215057597 0.22558762273132996 1.0 ['ENST00000489097.5_1_1:6526697-6527309:-|nuORF'] 122594 7343 VGTGVHPI True NCI_RA007_Epitope_Rep1 778.4337381036601 778.43264993586 32.557 2 -0.7474664380138863 0.22558762273132996 1.0 ['BRCA1|p.L1800V|1|0.31|ENSG00000012048|chr17:43049129-43049129|G/C|missense_variant'] 57718 8143 LENKIQDWYDK True NCI_RA007_Epitope_Rep1 1450.70924423042 1450.70814993586 35.673 2 -0.7475743564715112 0.2256221828838344 1.0 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 118302 18163 VDCVKKLL True PC9_epitope_Rep5 916.5415743004799 916.54046993586 74.873 2 -0.7475802290586426 0.2256221828838344 1.0 ['nc|ENSG00000165192|Q8WXH4-3|ASB11', 'nc|ENSG00000165192|Q8WXH4-2|ASB11', 'ENSG00000165192|ENST00000480796|ASB11'] 15913 7281 EDRKNEDL True PC9_epitope_Rep5 1017.4727023631699 1017.47160993586 32.97 2 -0.7475938923310106 0.2256221828838344 1.0 ['ENST00000517548.1_1_6:109409388-109415153:-|nuORF'] 119578 8473 VERLGLHRQCR True NCI_RA007_Epitope_Rep1 1365.74117057873 1365.73951490379 36.956 3 -0.7476280423992852 0.22564857788884923 1.0 ['ENST00000377996.5_1_9:35846336-35847153:+|nuORF'] 19729 9724 ELSNSTVYF True PC9_epitope_Rep3 1058.49204082542 1058.49094993586 42.356 2 -0.7476790843064709 0.2256898475269617 1.0 ['ENSG00000081087|ENST00000193322|OSTM1'] 33283 18003 GLASLQIP True PC9_epitope_Rep6 797.46470387877 797.46360993586 81.876 2 -0.7477028718400658 0.22569465103825787 1.0 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1', 'nc|ENSG00000125149|Q9BSU1-2|PHAF1', 'ENST00000569626.1_1_16:67154016-67168169:+|nuORF'] 91808 20014 RPLVPEVSI True PC9_epitope_Rep5 1008.59678067748 1008.59568993586 82.035 2 -0.7477050055611487 0.22569465103825787 1.0 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 91282 15438 RLWWYHWICWL True NCI_RA007_Epitope_Rep2 1660.81254461384 1660.81144993586 64.751 2 -0.7477057689944507 0.22569465103825787 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 101002 7526 SLTDRQPLS True PC9_epitope_Rep2 1015.5298233164699 1015.52872993586 34.316 2 -0.7478280045775424 0.22573591753558733 1.0 ['ACSBG1|p.A346Pfs*11|1|0.19|ENSG00000103740|chr15:78182004-78182004|C/-|frameshift_variant', 'ENSG00000103740|ENST00000258873|ACSBG1'] 119276 13563 VELHLAGT True NCI_RA007_Epitope_Rep1 838.45486747106 838.45376993586 56.767 2 -0.7478485939788577 0.22574743418116913 1.0 ['nc|ENSG00000121904|Q7Z408|CSMD2', 'ENSG00000121904|ENST00000373381|CSMD2'] 112378 11813 TNDENEQVEED True H1975_Epitope_Rep1 1320.4953478522 1320.4942499358601 50.433 2 -0.747909295843394 0.22578869866579404 1.0 ['ZSWIM2|p.H129Q|1|0.23|ENSG00000163012|chr2:186839066-186839066|A/T|missense_variant'] 17681 10126 EHSIKVSV True PC9_epitope_Rep1 897.49198125577 897.49088993586 43.823 2 -0.7479587706657942 0.2258414766558089 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 109026 5086 TEWLRFYNKWL True H1975_Epitope_Rep3 1554.7983340183396 1554.79669490379 24.679 3 -0.747975066814201 0.2258414766558089 1.0 ['nc|ENSG00000157800|Q8NCC5-3|SLC37A3', 'nc|ENSG00000157800|Q8NCC5-2|SLC37A3', 'ENSG00000157800|ENST00000326232|SLC37A3', 'ENST00000473707.5_1_7:140051761-140069464:-|nuORF', 'ENST00000464865.5_1_7:140051761-140082350:-|nuORF'] 81370 17267 PPSRSRLL True PC9_epitope_Rep4 924.5504991913999 924.54940993586 74.423 2 -0.7480394206510248 0.22585299104619685 1.0 ['ENST00000467438.1_1_1:87597663-87598596:+|nuORF'] 112397 11238 TNFCFWKNLYR True NCI_RA007_Epitope_Rep2 1490.7128901422197 1490.71178993586 48.298 2 -0.7480399672717986 0.22585922279561577 1.0 ['ENST00000366744.5_1_1:228296168-228296940:-|nuORF'] 94886 4669 RYPALREK True NCI_RA007_Epitope_Rep3 1031.5876129761098 1031.58650993586 25.3 2 -0.7480718302706204 0.22585922279561577 1.0 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'nc|ENSG00000087274|P35611-5|ADD1', 'ENST00000503169.5_1_4:2877642-2906862:+|nuORF'] 38028 16087 HEILQWVL True NCI_RA007_Epitope_Rep4 1036.5705659296398 1036.56946993586 69.77 2 -0.748075408037787 0.22585922279561577 1.0 ['ENSG00000108829|ENST00000225972|LRRC59'] 18251 17961 EISNSTRASP True PC9_epitope_Rep1 1060.51490152832 1060.51380993586 73.879 2 -0.7481060054815212 0.22585922279561577 1.0 ['nc|ENSG00000163081|Q96MF4|CCDC140'] 8655 13947 AVASEHLEL True PC9_epitope_Rep3 967.49746055903 967.49636993586 58.724 2 -0.7481177294763931 0.22585922279561577 1.0 ['APTX|p.R218S|1|0.23|ENSG00000137074|chr9:32984747-32984747|C/A|missense_variant'] 14911 20191 DYKGDATVFFI True PC9_epitope_Rep3 1274.6183039676998 1274.61720993586 82.923 2 -0.748135353960095 0.22585922279561577 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 95718 3583 SCCCCCCC True PC9_epitope_Rep1 826.10688658094 826.10578993586 18.705 2 -0.7482147484834012 0.22585922279561577 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 75833 6447 NRDLATPVM-[Oxidation] True PC9_epitope_Rep2 1031.50698007735 1031.50588993586 30.212 2 -0.7482745788535694 0.22586737652989902 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 63181 12297 LNTEVSNPMEY True H1975_Epitope_Rep3 1295.57036779911 1295.5692699358601 52.481 2 -0.7482935275815509 0.22586737652989902 1.0 ['nc|ENSG00000158816|Q5TIE3-5|VWA5B1', 'ENSG00000158816|ENST00000289815|VWA5B1', 'nc|ENSG00000158816|Q5TIE3|VWA5B1', 'nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 20290 5453 EPAKLHLSAE True PC9_epitope_Rep6 1093.57677350889 1093.57566993586 28.902 2 -0.7484351077908125 0.2258788888227946 1.0 ['ENST00000371926.7_1_10:90640020-90661418:+|nuORF', 'ENST00000461650.1_1_10:90640020-90642233:+|nuORF'] 71790 2734 MNMKKSHEVQA True PC9_epitope_Rep5 1301.62202653249 1301.62039490379 15.054 3 -0.7484836317138006 0.22590527176741765 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'ENSG00000127720|ENST00000248306|METTL25'] 46099 7881 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 37.009 2 -0.7485100954651643 0.22591678315438837 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 63334 16337 LPEATSAVI True NCI_RA007_Epitope_Rep1 899.4963979298699 899.4958449679301 67.659 1 -0.7485614912472558 0.22592829419899774 1.0 ['nc|ENSG00000154639|P78310-4|CXADR', 'nc|ENSG00000154639|P78310-5|CXADR'] 107741 6336 TALRIKKTL True NCI_RA007_Epitope_Rep2 1042.68626438822 1042.6851699358601 29.252 2 -0.7486068969594378 0.225939804901261 1.0 ['nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1', 'nc|ENSG00000135503|P36896-5|ACVR1B', 'ENSG00000135503|ENST00000257963|ACVR1B', 'ACVR1B|p.Q496R|1|0.41|ENSG00000135503|chr12:51994079-51994079|A/G|missense_variant', 'ENST00000403332.2_1_6:129478670-129479855:-|nuORF', 'nc|ENSG00000135503|P36896-4|ACVR1B', 'ENSG00000139567|ENST00000388922|ACVRL1'] 104639 10410 SSWDYRRAL True PC9_epitope_Rep4 1152.5676058075198 1152.56650993586 47.747 2 -0.7486944727753808 0.22599592558997159 1.0 ['AluSc_dup26247|chr14:55143427-55143722:-|1.6368109521386809|0.0255733500930304|6.0|501.0|15|2|anti-sense'] 2978 13165 AFLHSDMLTVV True PC9_epitope_Rep5 1231.62709482959 1231.6254449037901 55.644 3 -0.7487797161453016 0.2259973532779207 1.0 ['ENST00000276390.6_1_8:20078656-20078743:+|nuORF'] 59492 10445 LGPHLNVVN True PC9_epitope_Rep1 961.53451477409 961.53340993586 45.065 2 -0.7487801656649103 0.2259973532779207 1.0 ['ENSG00000113721|ENST00000261799|PDGFRB', 'ENST00000520579.5_1_5:149495328-149514444:-|nuORF'] 35323 12674 GSVEEQLKSLK True NCI_RA007_Epitope_Rep1 1216.66631678928 1216.66520993586 53.282 2 -0.7488074212298215 0.2259973532779207 1.0 ['nc|ENSG00000130347|Q8WWV3-2|RTN4IP1', 'ENSG00000130347|ENST00000369063|RTN4IP1'] 56169 10482 LDNMYDAR True PC9_epitope_Rep1 996.4334804034798 996.43238993586 45.207 2 -0.7488082269501559 0.2259973532779207 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 109872 9824 THMTAIVGM-[Oxidation] True PC9_epitope_Rep3 975.4517737003499 975.45066993586 42.748 2 -0.7489087617790796 0.226094714147647 1.0 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 69824 17847 LWWWSWRWWKL True H1975_Epitope_Rep3 1731.88267277899 1731.8815699358602 74.681 2 -0.7489089761665192 0.226094714147647 1.0 ['chr12:54282611-54283827|502|64.93|0.0|22.63|+|1|HNRNPA1,HNRNPA1|1'] 133720 5411 WLKIRISKL True NCI_RA007_Epitope_Rep4 1155.7491989979499 1155.74755490379 27.384 3 -0.7489767305515244 0.22613595813012966 1.0 ['TAS2R1|p.M120I|1|0.31|ENSG00000169777|chr5:9629673-9629673|C/A|missense_variant'] 137546 24812 YLRMIKRSS True PC9_epitope_Rep2 1152.6437479532399 1152.64210490379 101.13 3 -0.7491562859575155 0.22616233254531126 1.0 ['ENST00000550201.5_1_12:57929618-57940812:-|nuORF'] 112220 6583 TLWPKWMT True NCI_RA007_Epitope_Rep1 1061.5368232732098 1061.5357299358602 29.619 2 -0.7491967561756089 0.22620357429599453 1.0 ['ENST00000545220.1_1_12:7343495-7354840:+|nuORF'] 31929 10543 GERDPSLVEAQ True PC9_epitope_Rep2 1199.57823006087 1199.57712993586 45.874 2 -0.749229343269652 0.2262097673381402 1.0 ['ENST00000504986.5_1_4:41937290-41937434:+|nuORF'] 128555 10936 VSHSVAKLI True PC9_epitope_Rep1 952.5705659296399 952.56946993586 46.953 2 -0.7492613167170518 0.2262097673381402 1.0 ['ENST00000452385.5_1_3:48982572-49020700:+|nuORF', 'ENSG00000177479|ENST00000356401|ARIH2', 'ENST00000584680.1_1_18:26231883-26232303:+|nuORF'] 125039 10201 VLPFCRLP True NCI_RA007_Epitope_Rep5 943.53134396995 943.53024993586 45.871 2 -0.749284787702078 0.2262097673381402 1.0 ['L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|257|2|anti-sense'] 39984 8407 HQRCMRTLWRR True NCI_RA007_Epitope_Rep1 1541.7932232349299 1541.7915749037902 36.704 3 -0.7492990668489721 0.2262097673381402 1.0 ['ENST00000549488.5_1_12:53693918-53699773:+|nuORF'] 58960 10278 LFYKERELDKR True H1975_Epitope_Rep1 1495.8147123584697 1495.81306490379 44.479 3 -0.7493548667926802 0.2262097673381402 1.0 ['ENSG00000185670|ENST00000394807|ZBTB3', 'nc|ENSG00000185670|Q9H5J0|ZBTB3'] 99641 14511 SLFSVHSSL True PC9_epitope_Rep4 975.5025459394701 975.50144993586 63.731 2 -0.7493876194840916 0.2262097673381402 1.0 ['PHLDB3|p.C374S|1|0.17|ENSG00000176531|chr19:43494730-43494730|C/G|missense_variant'] 60825 23966 LKKKKKKKKK True H1975_Epitope_Rep3 1283.94929578683 1283.9476649037902 99.894 3 -0.7493980133412448 0.2262097673381402 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 18417 8223 EKERLRAQW True NCI_RA007_Epitope_Rep4 1214.6520041378196 1214.65090993586 38.419 2 -0.7494576630862441 0.22622268470343393 1.0 ['ENSG00000162460|ENST00000375782|TMEM82'] 48289 7445 KDLILPKISDP True NCI_RA007_Epitope_Rep4 1237.72818876985 1237.72654490379 35.28 3 -0.7494907542142555 0.22622268470343393 1.0 ['ENSG00000155252|ENST00000370631|PI4K2A'] 12077 12541 DIERLLLR True H1975_Epitope_Rep1 1026.6185787512197 1026.61748993586 53.283 2 -0.7495050141150073 0.22622268470343393 1.0 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 83633 8956 QDYLLLINCQ True H1975_Epitope_Rep3 1221.60635938501 1221.6052699358602 39.444 2 -0.749551882143698 0.22622268470343393 1.0 ['nc|ENSG00000109458|Q13480-2|GAB1', 'ENSG00000109458|ENST00000262994|GAB1', 'GAB1|p.P311Qfs*24|1|0.19|ENSG00000109458|chr4:143438336-143438336|C/-|frameshift_variant'] 118066 10561 VATRPPQQAP True PC9_epitope_Rep3 1063.57744221523 1063.5763499358602 45.57 2 -0.7495703139930641 0.22622268470343393 1.0 ['ENST00000571730.1_1_17:79687201-79687258:+|nuORF'] 13423 10741 DNMSTFQSI True PC9_epitope_Rep4 1041.44371073401 1041.4426099358602 49.072 2 -0.7497334944775601 0.22624905234053308 1.0 ['ENST00000463753.5_1_3:99396828-99397035:+|nuORF'] 111221 13378 TLGALEALSV True PC9_epitope_Rep3 972.54916177872 972.54806993586 56.49 2 -0.7497398600238583 0.22626055416815316 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4'] 13491 8293 DPEFSGKSY True H1975_Epitope_Rep2 1028.4450906329998 1028.4439899358601 36.85 2 -0.7497795706179753 0.2262984213812171 1.0 ['SORL1|p.M2063Vfs*2|1|0.15|ENSG00000137642|chr11:121625100-121625101|AT/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1'] 94324 9521 RWWFRRLFLIF True H1975_Epitope_Rep2 1638.9299573245796 1638.9283049037901 41.594 3 -0.7497889510477167 0.2262984213812171 1.0 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 3730 9162 AGSRGLPEL True PC9_epitope_Rep3 898.4872302284999 898.48612993586 40.182 2 -0.7498286117598211 0.22635451505016724 1.0 ['nc|ENSG00000159753|Q6F5E8-2|CARMIL2', 'ENSG00000159753|ENST00000334583|CARMIL2', 'ENST00000602321.5_1_16:67685605-67685749:+|nuORF'] 18562 14767 EKVLDEFSKQ True PC9_epitope_Rep2 1221.62411762413 1221.6230299358601 62.067 2 -0.7498333167318363 0.22636264993980112 1.0 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6'] 110297 11395 TIHEEQYY True H1975_Epitope_Rep2 1081.47163973401 1081.4705499358602 48.88 2 -0.7498641199796777 0.22636264993980112 1.0 ['ENST00000513178.1_1_4:47954638-48018683:-|nuORF'] 100958 5600 SLSRYLYHQRW True NCI_RA007_Epitope_Rep4 1507.76843087239 1507.76677490379 28.139 3 -0.7499214026522577 0.22640051130367575 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2'] 55647 6720 LDALDHAGY True PC9_epitope_Rep5 973.4505103666099 973.44940993586 30.819 2 -0.7499924658228041 0.22640051130367575 1.0 ['ENSG00000107201|ENST00000379883|RIGI', 'ENST00000379868.5_1_9:32491415-32526182:-|nuORF'] 104810 7154 STDSKDVCRMF True H1975_Epitope_Rep1 1287.5587575695897 1287.5576499358601 32.541 2 -0.7500324989897507 0.22640864434238492 1.0 ['TCHHL1|p.L732Sfs*11|1|0.1|ENSG00000182898|chr1:152085488-152085488|G/-|frameshift_variant', 'ENSG00000182898|ENST00000368806|TCHHL1'] 82802 5232 PVSDRSPPP True PC9_epitope_Rep2 950.48214484806 950.48104993586 25.515 2 -0.7500763508680308 0.22640864434238492 1.0 ['ENST00000457226.2_3_9:2017114-2029019:+|nuORF'] 111571 13817 TLNCCFDPFIY True H1975_Epitope_Rep2 1334.56753134814 1334.56642993586 58.294 2 -0.7501182321697539 0.22641341180667024 1.0 ['ENSG00000147145|ENST00000614823|LPAR4'] 31019 11036 GAVERPLSL True NCI_RA007_Epitope_Rep4 940.5341804209199 940.53308993586 49.323 2 -0.7501424879764564 0.22641341180667024 1.0 ['ENSG00000107371|ENST00000327304|EXOSC3', 'nc|ENSG00000107371|Q9NQT5-2|EXOSC3'] 19392 14800 ELPDNHSSL True PC9_epitope_Rep1 1010.4668887067401 1010.46578993586 61.748 2 -0.7501466277989293 0.22641341180667024 1.0 ['ENSG00000054116|ENST00000373166|TRAPPC3', 'nc|ENSG00000054116|O43617-2|TRAPPC3', 'ENST00000462715.1_1_1:36603336-36605749:-|nuORF'] 73308 3952 NEKVPFNDTK True NCI_RA007_Epitope_Rep3 1190.59315184902 1190.59150490379 21.912 3 -0.7502685094760461 0.2264397711228357 1.0 ['nc|ENSG00000162869|Q6ZMI0-5|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-2|PPP1R21', 'ENSG00000162869|ENST00000294952|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-3|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-4|PPP1R21'] 3038 14371 AFVIIHYL True PC9_epitope_Rep5 974.5589386167801 974.55784993586 60.278 2 -0.7503140861424439 0.22645126772285468 1.0 ['ENST00000274030.10_1_4:120214337-120214382:+|nuORF'] 118122 15343 VAVATVHLVI True PC9_epitope_Rep2 1020.6331661861999 1020.63206993586 64.296 2 -0.750343235608646 0.22646276398115536 1.0 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 87193 23007 QSLIPFVQL True PC9_epitope_Rep5 1043.60153170475 1043.60097496793 93.487 1 -0.7504594634440407 0.22650398287956247 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'nc|ENSG00000122512|P54278-2|PMS2', 'nc|ENSG00000122512|P54278-3|PMS2'] 66486 16416 LSRVRCPV True PC9_epitope_Rep1 928.5276555718399 928.52654993586 67.967 2 -0.7505022912113517 0.22652024014741723 1.0 ['ENST00000604213.1_1_15:100257715-100257970:-|nuORF'] 118501 12034 VDSLQKFSSL True PC9_epitope_Rep5 1122.59208921986 1122.59044490379 51.283 3 -0.7505300977177812 0.22652024014741723 1.0 ['nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-2|TMEM132B'] 90960 8683 RLGRRRLYC True NCI_RA007_Epitope_Rep4 1191.6771137701899 1191.67546490379 40.186 3 -0.750564953006105 0.22652024014741723 1.0 ['ENST00000313173.5_1_2:176994704-176994896:+|nuORF'] 93313 10204 RRSARWPWPER True H1975_Epitope_Rep1 1495.7908976524698 1495.78924490379 44.19 3 -0.7505696561803749 0.22652024014741723 1.0 ['HTR1A|p.V295Cfs*50|2|0.23|ENSG00000178394|chr5:63960837-63960837|C/-|frameshift_variant'] 134775 7398 WYEEEESF True PC9_epitope_Rep1 1117.4240208352498 1117.42292993586 33.27 2 -0.7506182497046393 0.22653649548264385 1.0 ['ENSG00000074771|ENST00000159060|NOX3', 'NOX3|p.Q345Rfs*49|2|0.27|ENSG00000074771|chr6:155428906-155428906|G/-|frameshift_variant'] 56768 7859 LEARELGVA True H1975_Epitope_Rep3 956.5290950404799 956.52798993586 35.205 2 -0.7506406138644863 0.22653649548264385 1.0 ['ENST00000336314.8_2_5:154194701-154194878:+|nuORF'] 14117 7783 DSEFRYTL True NCI_RA007_Epitope_Rep3 1029.47672511445 1029.47562993586 37.737 2 -0.7506794554666342 0.22653649548264385 1.0 ['ENSG00000169403|ENST00000373857|PTAFR'] 32643 17579 GHGVKGVSSLF True PC9_epitope_Rep3 1086.5821932425 1086.58108993586 72.805 2 -0.7506815163685938 0.22653649548264385 1.0 ['ENSG00000183347|ENST00000370456|GBP6', 'nc|ENSG00000183347|Q6ZN66-2|GBP6'] 66825 8312 LSVQVFIDK True NCI_RA007_Epitope_Rep2 1047.59644632431 1047.5953499358602 36.971 2 -0.7507223759334868 0.22654798876621543 1.0 ['ENST00000602574.5_1_10:22607528-22607842:+|nuORF'] 54893 20562 LAGNRIVEIL True PC9_epitope_Rep1 1096.6604435631998 1096.65934993586 83.904 2 -0.7508213507797746 0.22657097430868214 1.0 ['ENSG00000139263|ENST00000320743|LRIG3', 'nc|ENSG00000139263|Q6UXM1-2|LRIG3', 'LRIG3|p.L194Pfs*19|1|0.22|ENSG00000139263|chr12:58890075-58890076|GT/-|frameshift_variant'] 99297 16775 SLDIQHVLDKL True NCI_RA007_Epitope_Rep1 1279.71360133487 1279.71250993586 69.378 2 -0.7508623115255386 0.22657097430868214 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 101241 6288 SLWGGEVP True PC9_epitope_Rep1 843.41266830591 843.41156993586 29.0 2 -0.7508853623991615 0.22658246656760772 1.0 ['nc|ENSG00000261480|H3BSY2-2|GOLGA8M', 'nc|ENSG00000261480|H3BSY2-3|GOLGA8M'] 116414 2292 TWMRRHRLV True H1975_Epitope_Rep1 1253.69276383433 1253.69110490379 11.851 3 -0.750914355347169 0.22659871627243552 1.0 ['nc|ENSG00000197275|Q9Y620-2|RAD54B'] 11044 4635 DDMGRRNA True PC9_epitope_Rep3 933.4086626379699 933.40756993586 22.923 2 -0.7509477268806367 0.22659871627243552 1.0 ['ENSG00000250423|ENST00000691062|KIAA1210', 'nc|ENSG00000250423|Q9ULL0|KIAA1210'] 3639 6875 AGQAGVRSSW True PC9_epitope_Rep5 1017.49919189453 1017.49808993586 31.415 2 -0.7509649952062001 0.22659871627243552 1.0 ['nc|ENSG00000160753|Q9BVN2-3|RUSC1'] 57078 23307 LEEKVLRLTRT True PC9_epitope_Rep5 1356.8088987020396 1356.8078099358602 94.63 2 -0.7509667452605744 0.22659871627243552 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2'] 126517 14580 VPNLSWEVL True PC9_epitope_Rep1 1055.56514619603 1055.56404993586 60.905 2 -0.7509899018855886 0.2266331882270789 1.0 ['ENST00000368096.5_1_1:159893305-159893494:-|nuORF'] 25555 19968 FERRRELRRQK True H1975_Epitope_Rep2 1572.9073243870396 1572.90568490379 82.785 3 -0.7510145924456763 0.2266331882270789 1.0 ['ENST00000482470.5_1_7:134552484-134644871:+|nuORF', 'nc|ENSG00000122786|Q05682-4|CALD1', 'nc|ENSG00000122786|Q05682-6|CALD1', 'nc|ENSG00000122786|Q05682-2|CALD1', 'ENSG00000122786|ENST00000361675|CALD1', 'ENST00000475772.5_1_7:134552484-134552556:+|nuORF'] 70552 12850 LYVRDTLQP True PC9_epitope_Rep2 1103.59750895347 1103.59640993586 54.728 2 -0.7510397945319978 0.2266331882270789 1.0 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 56328 10292 LDRERVAV True PC9_epitope_Rep1 956.5403284305198 956.53922993586 44.473 2 -0.7511437038195011 0.22668588153144453 1.0 ['ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant'] 83634 5245 QDYMFETL True PC9_epitope_Rep5 1045.44264810485 1045.4415499358602 25.192 2 -0.7511684872783629 0.22668588153144453 1.0 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'chr4:69599394-69638899|138|17.34|0.08|7.68|-|ENST00000514019|UGT2A2,UGT2A2', 'chr4:69599394-69646930|175|34.62|0.22|7.32|-|ENST00000512704|UGT2A2,UGT2A1', 'nc|ENSG00000173610|P0DTE4-1|UGT2A1', 'ENSG00000173610|ENST00000286604|UGT2A1'] 43779 19195 IIYQYFEMFVK True PC9_epitope_Rep5 1479.7472099622703 1479.74557490379 78.873 3 -0.7511976367096639 0.22669737037587281 1.0 ['SEC61A1|p.I460M|1|0.23|ENSG00000058262|chr3:128069611-128069611|C/G|missense_variant'] 75074 15470 NMPVCSRSI True PC9_epitope_Rep4 1005.47357139365 1005.47246993586 67.434 2 -0.751276488292371 0.2267088588789351 1.0 ['ENST00000398571.6_2_2:61515929-61516001:-|nuORF'] 121577 3470 VGKTYFFKGEW True NCI_RA007_Epitope_Rep2 1360.6815729306 1360.67992490379 18.155 3 -0.7513554520554546 0.2267352032327074 1.0 ['MMP24|p.R495W|1|0.27|ENSG00000125966|chr20:35271718-35271718|C/T|missense_variant'] 88687 26347 RCGCGCAA True H1975_Epitope_Rep1 739.2563850719899 739.25583496793 109.49 1 -0.7514116331223881 0.22676154680373775 1.0 ['ENST00000368314.5_1_6:127587778-127587985:+|nuORF'] 65691 8517 LSHHQKRPG True PC9_epitope_Rep3 1058.5733598943 1058.57226993586 37.718 2 -0.7514461724109579 0.22678452053777018 1.0 ['ENST00000569914.5_1_16:67144038-67154090:+|nuORF'] 70534 16180 LYTGTVSSF True PC9_epitope_Rep6 973.47566248529 973.47511496793 74.592 1 -0.7514512326824425 0.22678452053777018 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B'] 123880 24700 VKDRKKKKKK True H1975_Epitope_Rep3 1284.8717737421196 1284.8706699358602 102.75 2 -0.751616552040843 0.22684531855791085 1.0 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 87114 13777 QSFRRKKDVYV True H1975_Epitope_Rep3 1424.7888319638 1424.7877299358602 58.295 2 -0.7516391689344719 0.22684531855791085 1.0 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-6|NUMB', 'nc|ENSG00000133961|P49757-5|NUMB', 'nc|ENSG00000133961|P49757-8|NUMB', 'nc|ENSG00000133961|P49757-7|NUMB', 'ENST00000554315.5_1_14:73753704-73876743:-|nuORF'] 110333 12239 TIKEEGLVLQE True NCI_RA007_Epitope_Rep3 1257.6816325002499 1257.68052993586 55.289 2 -0.7516439644819971 0.22684531855791085 1.0 ['nc|ENSG00000182185|O15315-4|RAD51B', 'nc|ENSG00000182185|O15315|RAD51B', 'CEP170-RAD51B|2|fusion'] 98773 20192 SISLSVSFPDV True PC9_epitope_Rep5 1149.59175486669 1149.59064993586 82.714 2 -0.7516470430792134 0.22684531855791085 1.0 ['nc|ENSG00000114013|P42081-5|CD86', 'nc|ENSG00000114013|P42081-6|CD86', 'nc|ENSG00000114013|P42081-4|CD86', 'nc|ENSG00000114013|P42081-3|CD86', 'ENSG00000114013|ENST00000330540|CD86'] 97171 5006 SFGWSTNLNEY True H1975_Epitope_Rep3 1316.567331024 1316.56622993586 24.381 2 -0.7516757062439853 0.22685680332739155 1.0 ['nc|ENSG00000182903|Q8TF20|ZNF721', 'ENSG00000182903|ENST00000511833|ZNF721'] 78459 10669 PCWWERRYKRR True PC9_epitope_Rep6 1634.8364679458998 1634.8353699358602 51.857 2 -0.7517392849830867 0.22687977184278543 1.0 ['ENST00000492991.5_1_9:132595938-132597442:-|nuORF'] 25035 19196 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 81.937 2 -0.751753443386003 0.22687977184278543 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 65559 7529 LSGEQNEQVK True NCI_RA007_Epitope_Rep2 1130.5567663402999 1130.5556699358601 33.912 2 -0.7518384007719338 0.22691759253757945 1.0 ['CON__ENSEMBL:ENSBTAP00000032840'] 69240 12363 LVNIWTISI True PC9_epitope_Rep6 1057.61718176889 1057.6160899358601 58.958 2 -0.7518746185106612 0.22691759253757945 1.0 ['ENSG00000109929|ENST00000264027|SC5D'] 140788 1577 YYRWLNYGGV True NCI_RA007_Epitope_Rep2 1289.6193070272097 1289.61766490379 8.585 3 -0.7519184418313568 0.22694392870404753 1.0 ['ENSG00000198056|ENST00000338193|PRIM1', 'ENST00000548173.5_1_12:57140708-57146082:-|nuORF', 'ENST00000546761.5_1_12:57139854-57146049:-|nuORF'] 67942 10467 LTLIYSQHHPL True H1975_Epitope_Rep2 1320.71902106848 1320.7173749037902 45.279 3 -0.7520010850053318 0.22702967649942074 1.0 ['ENST00000406172.6_1_22:19708391-19710534:+|nuORF'] 58874 15721 LFSRQRKLRLQ True PC9_epitope_Rep6 1443.87865002771 1443.87700490379 72.693 3 -0.7520394023334828 0.2270674904942966 1.0 ['AP1S3|p.G12R|1|0.2|ENSG00000152056|chr2:223777839-223777839|C/T|missense_variant'] 28821 10204 FTDGSFTQP True H1975_Epitope_Rep1 998.4345259493 998.43342993586 44.19 2 -0.7520582803517132 0.2270674904942966 1.0 ['ENSG00000185010|ENST00000360256|F8'] 79568 5647 PGSYKVEMAR True NCI_RA007_Epitope_Rep4 1136.5648289261997 1136.56372993586 28.326 2 -0.7520788666007916 0.22707897042878997 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 104573 14230 SSSPQGPLTV True PC9_epitope_Rep4 971.4923751785899 971.49126993586 62.644 2 -0.7520970404126996 0.22710530224268527 1.0 ['nc|ENSG00000120500|P36575-2|ARR3', 'ENSG00000120500|ENST00000307959|ARR3'] 59627 9973 LGSKEDTVI True PC9_epitope_Rep1 960.5127762699999 960.51166993586 43.225 2 -0.7521566276091135 0.2271316332744204 1.0 ['ENSG00000144843|ENST00000357003|ADPRH', 'ENST00000471850.1_1_3:119298364-119306722:+|nuORF'] 112521 12055 TPAALQVVIKY True NCI_RA007_Epitope_Rep1 1201.7070594024499 1201.7059699358601 50.879 2 -0.7521835385065784 0.22714446952595937 1.0 ['ENST00000582287.6_1_19:18545725-18546537:-|nuORF'] 78488 6909 PDEQYDFLFK True H1975_Epitope_Rep1 1300.59756852312 1300.5964699358601 31.617 2 -0.7521872662965156 0.22714446952595937 1.0 ['nc|ENSG00000172780|Q86YS6-2|RAB43', 'RAB43|p.H184Tfs*16|1|0.31|ENSG00000172780|chr3:129091186-129091186|C/-|frameshift_variant', 'ENSG00000172780|ENST00000315150|RAB43'] 48507 13372 KEFLHFLTDQF True PC9_epitope_Rep5 1423.7136013348697 1423.71250993586 56.451 2 -0.7521879976508542 0.22714446952595937 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'LY75|p.E1442Kfs*4|1|0.35|ENSG00000054219|chr2:159816862-159816862|C/-|frameshift_variant', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 12196 6701 DINELTNHM True NCI_RA007_Epitope_Rep2 1085.48115887189 1085.48006993586 30.679 2 -0.7522136106899431 0.22714446952595937 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant'] 88414 9142 QYRRVIGMFYK True PC9_epitope_Rep1 1459.7758247519498 1459.77418490379 40.015 3 -0.7522157617706199 0.22714446952595937 1.0 ['ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 108484 4994 TEEVLDHMGTF True H1975_Epitope_Rep2 1277.5598031154097 1277.55814490379 24.294 3 -0.7522657395208288 0.22721534965917697 1.0 ['ENSG00000115942|ENST00000234296|ORC2'] 79675 6925 PHKRSHRHRGK True H1975_Epitope_Rep1 1394.78681533154 1394.78515490379 31.68 3 -0.752312197715074 0.2272943272943273 1.0 ['ENSG00000140986|ENST00000268661|RPL3L'] 52182 14293 KMERLFDLYFY True H1975_Epitope_Rep1 1523.7482725914301 1523.74716993586 60.164 2 -0.7523532295602698 0.2272943272943273 1.0 ['ENSG00000214237|ENST00000465419|MINDY4B'] 33666 4346 GLPHRVRGP True NCI_RA007_Epitope_Rep4 987.5726316183099 987.57152993586 23.064 2 -0.7523705348435751 0.2272943272943273 1.0 ['ENSG00000005436|ENST00000321027|GCFC2', 'nc|ENSG00000005436|P16383-2|GCFC2', 'nc|ENSG00000005436|P16383-3|GCFC2', 'nc|ENSG00000005436|P16383-4|GCFC2'] 44125 5389 ILNSFEHEFLS True H1975_Epitope_Rep1 1334.65066672514 1334.6495699358602 25.786 2 -0.7524110640784132 0.22730242642036175 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 136864 19262 YIWVKGRWKWK True PC9_epitope_Rep2 1548.87177374212 1548.8701349037901 79.465 3 -0.7524210438498153 0.22730242642036175 1.0 ['ENST00000373001.3_1_1:39311726-39317298:-|nuORF'] 85891 10330 QNLEPMFEQYI True H1975_Epitope_Rep1 1410.64895247298 1410.6478499358602 44.682 2 -0.7524592501718607 0.22732537419814683 1.0 ['CON__P50446'] 64758 27271 LRRRRFKMRRM True PC9_epitope_Rep3 1604.9456415553998 1604.9440049037898 112.28 3 -0.7524696748101699 0.22732537419814683 1.0 ['ENSG00000023171|ENST00000635736|GRAMD1B'] 42249 12717 IEHIQINKAP True PC9_epitope_Rep3 1161.65060715549 1161.6495099358601 53.938 2 -0.7524959520673028 0.22735169648823222 1.0 ['ENST00000407033.2_1_6:56736261-56736483:+|nuORF'] 114500 8132 TSFRQKVSND True NCI_RA007_Epitope_Rep2 1180.5836497944797 1180.58254993586 36.265 2 -0.7525657700393809 0.2273597933092788 1.0 ['SGO1|p.P347S|1|0.25|ENSG00000129810|chr3:20174492-20174492|G/A|missense_variant'] 32541 16438 GGTDFPAAQT True PC9_epitope_Rep3 963.4297749220299 963.42922496793 68.366 1 -0.7525789623174245 0.2273597933092788 1.0 ['nc|ENSG00000144749|Q96JA1-2|LRIG1'] 54991 7896 LAILCQWFEFF True NCI_RA007_Epitope_Rep2 1415.69478046659 1415.6936899358602 35.345 2 -0.7526452664808921 0.227367889649438 1.0 ['ENST00000324348.8_2_17:7818314-7818512:-|nuORF'] 133697 19204 WLCPTGITA True NCI_RA007_Epitope_Rep5 960.4738886634799 960.47278993586 80.735 2 -0.7526483707143982 0.227367889649438 1.0 ['ENST00000594174.5_1_19:51378155-51379828:+|nuORF'] 138639 20906 YRRNFNYRRRR True H1975_Epitope_Rep3 1655.8981566856698 1655.8970499358602 87.307 2 -0.7526720924467691 0.22739420935412027 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 11337 7524 DEYKQYYYAAR True H1975_Epitope_Rep1 1468.6622940380003 1468.6611899358602 33.939 2 -0.7528134295466125 0.22746507104571573 1.0 ['nc|ENSG00000158089|Q96FL9-2|GALNT14', 'nc|ENSG00000158089|Q96FL9-4|GALNT14', 'ENSG00000158089|ENST00000349752|GALNT14', 'ENST00000486564.5_1_2:31133891-31178528:-|nuORF', 'nc|ENSG00000158089|Q96FL9-3|GALNT14'] 101293 12260 SLWYQQTLP True H1975_Epitope_Rep3 1134.5709598524602 1134.5698699358602 52.335 2 -0.752823479429586 0.22746978650117292 1.0 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 37787 8267 HCCRGTWWR True PC9_epitope_Rep4 1203.5178362474699 1203.5167299358602 39.259 2 -0.7528235358043796 0.22746978650117292 1.0 ['ENST00000480550.1_1_20:19998040-20007434:+|nuORF'] 45544 5383 ISGDRSFSGP True H1975_Epitope_Rep3 1021.4828731240499 1021.48176993586 25.773 2 -0.7528247554218823 0.22746978650117292 1.0 ['nc|ENSG00000135362|Q6MZQ0-3|PRR5L', 'ENST00000389693.3_1_11:36397601-36484283:+|nuORF', 'ENSG00000135362|ENST00000530639|PRR5L'] 28559 18311 FSLRSRCTF True NCI_RA007_Epitope_Rep4 1115.5545985956699 1115.5535099358601 79.215 2 -0.7528783348568352 0.22749610273921758 1.0 ['ENST00000361189.6_1_5:108719181-108745589:-|nuORF'] 66185 19905 LSPKTTISV True PC9_epitope_Rep5 944.55424715916 944.55314993586 81.619 2 -0.7528982247976161 0.22750757170853375 1.0 ['ENST00000474985.5_1_2:33809845-33813599:-|nuORF', 'ENSG00000119812|ENST00000238823|FAM98A'] 7567 15267 ASGDTLYIAT True PC9_epitope_Rep5 1010.49204082542 1010.49147496793 63.734 1 -0.7529247785122112 0.2275156625790552 1.0 ['ENSG00000100811|ENST00000262238|YY1'] 28994 10313 FTIAAKHHIT True NCI_RA007_Epitope_Rep5 1137.62947778809 1137.62782490379 46.299 3 -0.7529672470787815 0.2275156625790552 1.0 ['ENSG00000125814|ENST00000377026|NAPB', 'nc|ENSG00000125814|Q9H115-2|NAPB', 'nc|ENSG00000125814|Q9H115-3|NAPB'] 93064 20778 RRRKRGRFHPG True H1975_Epitope_Rep2 1421.8340998771298 1421.83246490379 86.036 3 -0.753013236699642 0.22754197657328643 1.0 ['ENSG00000170396|ENST00000302277|ZNF804A', 'ZNF804A|p.P1071Qfs*25|1|0.28|ENSG00000170396|chr2:184938607-184938607|C/-|frameshift_variant'] 24879 959 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 5.0775 2 -0.7530253127432975 0.22754464351982426 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 115860 7945 TVNQRVWL True PC9_epitope_Rep4 1014.5610638750999 1014.55996993586 38.001 2 -0.7530528428238699 0.22754464351982426 1.0 ['ENST00000265801.6_2_8:20106235-20106451:-|nuORF'] 59078 5750 LGDRSKEYIRK True NCI_RA007_Epitope_Rep4 1363.7571974823497 1363.75555490379 28.736 3 -0.7531155620618536 0.22754464351982426 1.0 ['ENSG00000163376|ENST00000417314|KBTBD8'] 56473 12827 LDTEAGRCVP True PC9_epitope_Rep2 1059.5018943164698 1059.5007899358602 54.641 2 -0.7531186829410099 0.22754464351982426 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 30235 3548 GAAAPPPAPR True NCI_RA007_Epitope_Rep4 903.4926499621099 903.49154993586 19.661 2 -0.7531217396046002 0.22754464351982426 1.0 ['ENST00000520220.6_2_8:56792441-56792612:+|nuORF'] 15280 10795 EAGVTGIRRW True H1975_Epitope_Rep3 1143.61489035311 1143.61378993586 46.602 2 -0.7531309845332137 0.22754464351982426 1.0 ['RC3H2|p.R156Pfs*98|1|0.31|ENSG00000056586|chr9:122890428-122890429|-/G|frameshift_variant'] 84264 11617 QEWQGSLLG True PC9_epitope_Rep2 1016.4927095317598 1016.49160993586 50.011 2 -0.7531314014067688 0.22754464351982426 1.0 ['nc|ENSG00000106327|Q9UP52-2|TFR2', 'ENST00000476304.5_1_7:100218482-100231271:-|nuORF', 'nc|ENSG00000106327|Q9UP52-3|TFR2', 'ENSG00000106327|ENST00000223051|TFR2'] 138718 5788 YRWQDEHKFWK True H1975_Epitope_Rep1 1621.7789955560895 1621.77736490379 27.336 3 -0.753175261050609 0.22754464351982426 1.0 ['MOB3A|p.R108W|1|0.37|ENSG00000172081|chr19:2078239-2078239|G/A|missense_variant'] 14779 9660 DWLVDRRHCSL True H1975_Epitope_Rep1 1398.6826526431 1398.6815499358602 42.083 2 -0.7532446366444788 0.2275561097256858 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'ENST00000579853.5_1_17:46048512-46051060:+|nuORF', 'ENST00000581708.5_1_17:46048512-46051791:+|nuORF', 'ENST00000584063.5_1_17:46048512-46051888:+|nuORF', 'ENST00000584525.5_1_17:46048512-46051498:+|nuORF', 'ENST00000583182.5_1_17:46048501-46051888:+|nuORF'] 19520 15525 ELQPSAVAAAV True PC9_epitope_Rep5 1054.56587447202 1054.56476993586 64.726 2 -0.7532696204165323 0.22758241921358488 1.0 ['ENST00000260526.10_1_1:94697171-94703089:-|nuORF'] 134965 12274 YAFWGAASF True PC9_epitope_Rep1 1018.4548674710599 1018.45376993586 52.068 2 -0.7533018645627791 0.2275938845183316 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 29619 16987 FVLNHLWL True PC9_epitope_Rep1 1040.5807366905199 1040.57962993586 70.163 2 -0.7533238215503063 0.22761681410675058 1.0 ['ENSG00000105428|ENST00000222033|ZNRF4'] 134967 11079 YAFWGAASF True PC9_epitope_Rep2 1018.4548674710599 1018.45376993586 47.937 2 -0.7533379326592868 0.22761681410675058 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 3763 20555 AGTPVPEPLP True PC9_epitope_Rep3 976.5229470308799 976.52184993586 84.328 2 -0.7534179947274828 0.22763298503918308 1.0 ['ENSG00000189319|ENST00000337318|FAM53B'] 6453 9626 APSQNCSAK True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 43.668 2 -0.7534249355974753 0.22763298503918308 1.0 ['ENSG00000135312|ENST00000369947|HTR1B'] 134876 13134 YACSTCTP True PC9_epitope_Rep1 844.30952576032 844.30842993586 55.388 2 -0.7534573290563213 0.22763298503918308 1.0 ['ENSG00000012963|ENST00000013070|UBR7'] 32778 6826 GIDFNWEYP True NCI_RA007_Epitope_Rep3 1139.4923751785898 1139.4912699358601 33.958 2 -0.7535050512250836 0.22763298503918308 1.0 ['ENSG00000128052|ENST00000263923|KDR', 'nc|ENSG00000128052|P35968-2|KDR', 'nc|ENSG00000128052|P35968-3|KDR', 'KDR|p.D433Ifs*11|1|0.41|ENSG00000128052|chr4:55107852-55107852|C/-|frameshift_variant'] 63837 13182 LPTIQKSL True PC9_epitope_Rep1 898.5487678559 898.54766993586 55.568 2 -0.753608363610751 0.22770381584220134 1.0 ['ENSG00000089154|ENST00000300648|GCN1', 'GCN1L1-CCND2|1|fusion'] 99682 7715 SLGEDNFPP True H1975_Epitope_Rep2 974.4345259492999 974.43342993586 34.628 2 -0.7536470096719452 0.22773482138881881 1.0 ['ENST00000601237.5_1_19:53122096-53138333:-|nuORF'] 64018 5783 LQDAEIAR True PC9_epitope_Rep3 914.4821448480599 914.48104993586 27.315 2 -0.7536489541797675 0.22773482138881881 1.0 ['ENSG00000197956|ENST00000368719|S100A6'] 94329 13743 RWWFRRLFLIF True PC9_epitope_Rep2 1638.9299573245796 1638.9283049037901 58.15 3 -0.7537130974065416 0.22773482138881881 1.0 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 81899 7385 PSLPSPPAVP True H1975_Epitope_Rep2 960.5280324113199 960.52692993586 33.346 2 -0.7537205471001202 0.22773482138881881 1.0 ['ENST00000588016.1_1_19:45556410-45561362:+|nuORF'] 134725 6870 WWRYWWHYPIC True NCI_RA007_Epitope_Rep1 1694.76050904098 1694.75940993586 30.726 2 -0.7537764953508597 0.22774628238995578 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 23099 13729 EVLQESAAV True PC9_epitope_Rep6 944.4814761417198 944.48036993586 64.597 2 -0.7538641300266143 0.2278022646661621 1.0 ['ENSG00000114646|ENST00000264723|CSPG5', 'nc|ENSG00000114646|O95196|CSPG5'] 68139 7797 LTPNPDGP True H1975_Epitope_Rep3 809.3919328613299 809.39082993586 34.974 2 -0.7539061287709662 0.22781034354826743 1.0 ['nc|ENSG00000144868|Q6UXF1-2|TMEM108', 'ENST00000511388.1_1_3:133098579-133114827:+|nuORF', 'ENSG00000144868|ENST00000321871|TMEM108'] 81609 23823 PRPFKRRWLLF True PC9_epitope_Rep4 1514.8986571962998 1514.89702490379 100.05 3 -0.7539076707461757 0.22781034354826743 1.0 ['ENST00000603928.2_2_9:136890984-136891107:+|nuORF'] 4294 9733 AIIYVIKKN True PC9_epitope_Rep6 1060.6644663144798 1060.6633699358601 47.85 2 -0.7539284654216355 0.22782180274834535 1.0 ['ENSG00000138443|ENST00000261018|ABI2', 'ENST00000464761.1_1_2:204276063-204301494:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-3|ABI2', 'ENST00000441061.5_2_2:204231693-204292072:+|nuORF', 'nc|ENSG00000138443|Q9NYB9-2|ABI2', 'nc|ENSG00000138443|Q9NYB9-4|ABI2', 'nc|ENSG00000138443|Q9NYB9|ABI2', 'nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'nc|ENSG00000136754|Q8IZP0-11|ABI1'] 63920 14523 LPWARELESRE True PC9_epitope_Rep3 1384.70991293676 1384.70880993586 60.985 2 -0.7540103103107207 0.22785617830803248 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 40666 8917 HTLFGDELC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep1 1218.5703085088896 1218.56920993586 38.686 2 -0.754019435465378 0.22785617830803248 1.0 ['CON__P02769'] 85442 7378 QLFLDWYVFWK True NCI_RA007_Epitope_Rep2 1543.7863723523099 1543.78526993586 33.323 2 -0.7540707264620009 0.22785617830803248 1.0 ['ENST00000496121.5_1_21:30434776-30434839:-|nuORF'] 127559 22580 VQVQRRKKVT True PC9_epitope_Rep4 1240.7727879768397 1240.7716899358602 95.087 2 -0.7540900831115089 0.2278676361477964 1.0 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'TRMT6|p.L275Ffs*10|1|0.1|ENSG00000089195|chr20:5942625-5942629|AAGAT/-|frameshift_variant', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 82228 16872 PTIISAPAAP True PC9_epitope_Rep5 936.5280324113198 936.52692993586 69.909 2 -0.7541147110071565 0.2278790936475197 1.0 ['SUGP1|p.P365S|1|0.3|ENSG00000105705|chr19:19297139-19297139|G/A|missense_variant'] 19531 11088 ELQQQFAKA True PC9_epitope_Rep3 1061.5505587610498 1061.54946993586 47.647 2 -0.7541354298731736 0.22789055080721748 1.0 ['nc|ENSG00000149639|O94964-1|MTCL2', 'ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-4|MTCL2'] 20478 11568 EPSRACGK True PC9_epitope_Rep1 846.4017863523799 846.40068993586 49.376 2 -0.7542503597809292 0.22797281657120813 1.0 ['ENST00000483591.6_1_6:16486245-16486323:-|nuORF'] 97341 12104 SFVVSFEIRK True H1975_Epitope_Rep1 1210.6710082468996 1210.66990993586 51.572 2 -0.7542581119428814 0.22797281657120813 1.0 ['L1M3_dup291|chr1:173794566-173795729:+|1.1397011898258065|0.3648644439828962|1.64|502.0|77|3|anti-sense'] 119580 8590 VERLKQDLL True NCI_RA007_Epitope_Rep3 1112.65535818276 1112.6542699358602 40.859 2 -0.754274156589477 0.22798088907353553 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 75831 6172 NRDLATPVM-[Oxidation] True PC9_epitope_Rep2 1031.50698007735 1031.50588993586 29.132 2 -0.7542878388893925 0.22798088907353553 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 3805 10893 AGVLTGLG True PC9_epitope_Rep1 686.39628996578 686.39574496793 46.785 1 -0.7543174350220094 0.22800510370612148 1.0 ['ENSG00000100156|ENST00000681075|SLC16A8'] 11232 7936 DENRSFEGTL True PC9_epitope_Rep2 1166.5203808315798 1166.5192899358601 35.892 2 -0.7543580432070428 0.22800510370612148 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ARHGAP42-SBF2|1|fusion', 'ENST00000525040.5_1_11:9801967-9809483:-|nuORF'] 69885 5268 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True H1975_Epitope_Rep1 1442.6356288295895 1442.6345299358602 25.327 2 -0.754361509636358 0.22800510370612148 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 131839 2686 VYAQVAWYCNR True PC9_epitope_Rep5 1371.6393908487896 1371.6377549037902 14.834 3 -0.7543813767274103 0.22800510370612148 1.0 ['BEST4|p.R67W|2|0.68|ENSG00000142959|chr1:44787420-44787420|G/A|missense_variant'] 66863 5046 LSWEAQLRR True H1975_Epitope_Rep3 1157.63054041725 1157.62888490379 24.531 3 -0.7544294908422714 0.22800510370612148 1.0 ['MYOM3|p.R248Afs*30|1|0.13|ENSG00000142661|chr1:24097926-24097926|G/-|frameshift_variant', 'ENST00000475306.1_1_1:24410803-24434643:-|nuORF', 'nc|ENSG00000142661|Q5VTT5-2|MYOM3', 'MYOM3|p.A1158Qfs*70|2|0.24|ENSG00000142661|chr1:24065953-24065953|C/-|frameshift_variant', 'ENSG00000142661|ENST00000374434|MYOM3'] 23247 20286 EVRGPRRRR True PC9_epitope_Rep2 1180.7013543720798 1180.70024993586 83.452 2 -0.7544330697624553 0.22800510370612148 1.0 ['chr6:34243712-34244831|310|28.3|0.7|5.34|+|1|None,HMGA1|2'] 116045 18265 TVRRHLQAL True PC9_epitope_Rep6 1092.6516102150001 1092.65050993586 82.897 2 -0.754501143008737 0.22801317429232687 1.0 ['nc|ENSG00000226807|Q6ZUA9|MROH5'] 62634 12783 LLVQKDILG True PC9_epitope_Rep4 997.6171817688898 997.61608993586 57.032 2 -0.7545139843607215 0.22801317429232687 1.0 ['ENST00000435989.6_1_19:58385349-58385952:-|nuORF'] 85047 12101 QILAVDEKIKV True PC9_epitope_Rep4 1254.75473787086 1254.7531049037902 54.351 3 -0.7545576363033659 0.22803946294785254 1.0 ['ENSG00000278803|ENST00000458091|PWWP4'] 127742 25669 VRKERKRHKT True NCI_RA007_Epitope_Rep2 1336.81638412432 1336.8152899358602 108.59 2 -0.754606325766671 0.22806575082336883 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 82646 18544 PVLPAHLL True PC9_epitope_Rep5 858.53272386894 858.53162993586 76.353 2 -0.75462408442672 0.2280920379189105 1.0 ['ENST00000442440.1_1_20:23337408-23337708:-|nuORF'] 43331 5804 IHFYPTFRYFK True NCI_RA007_Epitope_Rep1 1517.78195567821 1517.78032490379 26.629 3 -0.75465640410706 0.22811494014152414 1.0 ['ENSG00000165661|ENST00000358701|QSOX2'] 74378 23435 NISVPGLQ True PC9_epitope_Rep6 826.45486747106 826.45376993586 103.25 2 -0.7546620296242084 0.22811494014152414 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'LATS1|p.G535Efs*6|1|0.37|ENSG00000131023|chr6:149683485-149683485|C/-|frameshift_variant', 'nc|ENSG00000131023|O95835-2|LATS1', 'LATS1|p.D881Gfs*40|1|0.26|ENSG00000131023|chr6:149676689-149676690|-/C|frameshift_variant', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF'] 39422 10050 HMCLELTVWD True H1975_Epitope_Rep2 1245.5522156371699 1245.55110993586 43.649 2 -0.7547538213079751 0.22814720322767254 1.0 ['ENSG00000102362|ENST00000372989|SYTL4'] 88560 24767 RAIKGFGGIG True PC9_epitope_Rep3 974.5661492555398 974.56504993586 100.64 2 -0.7547841070178494 0.22814720322767254 1.0 ['ENST00000424266.6_1_6:41040043-41040205:-|nuORF', 'ENST00000479950.5_1_6:41039388-41040205:-|nuORF', 'ENST00000486443.5_1_6:41038950-41040205:-|nuORF', 'ENST00000463088.5_1_6:41039005-41040205:-|nuORF'] 88562 24800 RAIKGFGGIG True PC9_epitope_Rep5 974.5661492555398 974.56504993586 100.54 2 -0.7547864809595227 0.22814720322767254 1.0 ['ENST00000424266.6_1_6:41040043-41040205:-|nuORF', 'ENST00000479950.5_1_6:41039388-41040205:-|nuORF', 'ENST00000486443.5_1_6:41038950-41040205:-|nuORF', 'ENST00000463088.5_1_6:41039005-41040205:-|nuORF'] 66357 6274 LSQTHSLNN True PC9_epitope_Rep1 1012.4937721609201 1012.49266993586 28.946 2 -0.7548270092021171 0.22814720322767254 1.0 ['ENSG00000228083|ENST00000380222|IFNA14', 'IFNA14|p.R35S|1|0.24|ENSG00000228083|chr9:21239831-21239831|C/A|missense_variant', 'IFNA14|p.R35K|1|0.42|ENSG00000228083|chr9:21239832-21239832|C/T|missense_variant'] 79293 12881 PGIEKVDDVVK True PC9_epitope_Rep4 1197.6605031328497 1197.6594099358601 57.422 2 -0.7548351438998178 0.22814720322767254 1.0 ['ENSG00000116898|ENST00000373116|MRPS15'] 5331 11384 ALSNVNRV True PC9_epitope_Rep6 871.48756458167 871.48646993586 54.838 2 -0.7548365976060797 0.22814720322767254 1.0 ['UTRN|p.N91S|1|0.1|ENSG00000152818|chr6:144423586-144423586|A/G|missense_variant'] 126326 5966 VPKHQCGRC True PC9_epitope_Rep1 1026.4851391368597 1026.4840499358602 27.762 2 -0.754883902363976 0.22814720322767254 1.0 ['nc|ENSG00000180329|Q96MW1-2|CCDC43'] 80612 19147 PLPHIAVL True PC9_epitope_Rep5 858.5327238689399 858.53162993586 78.683 2 -0.7549041663746825 0.22814720322767254 1.0 ['ENSG00000162591|ENST00000356575|MEGF6', 'nc|ENSG00000162591|O75095-2|MEGF6'] 55979 13552 LDIEEQKLYWA True H1975_Epitope_Rep1 1406.7081816012599 1406.70708993586 57.251 2 -0.7549337759082231 0.2281586519920496 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 67976 18818 LTLQLTTV True PC9_epitope_Rep6 887.5327834385901 887.53168993586 85.026 2 -0.7549618308436586 0.22817010041679645 1.0 ['nc|ENSG00000279847|E5RJ46|LINC02906'] 23568 14644 EYDAVAEKAGK True H1975_Epitope_Rep1 1179.57716743171 1179.57606993586 61.54 2 -0.7549937179254439 0.2281896116994453 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 92738 18734 RRKKYGIVL True PC9_epitope_Rep5 1131.72404687927 1131.72241490379 77.075 3 -0.7550034541606665 0.2281896116994453 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 62576 22797 LLTWRFRRSRP True PC9_epitope_Rep3 1486.8633343167398 1486.8622299358601 92.96 2 -0.7550150589377028 0.2281896116994453 1.0 ['ENST00000273062.6_1_2:219270400-219270469:+|nuORF'] 98763 14232 SISERIKFVP True PC9_epitope_Rep2 1174.6710082468999 1174.66990993586 60.01 2 -0.7550215412026383 0.22819767441860464 1.0 ['ENSG00000179270|ENST00000331664|PCARE', 'PCARE|p.R571Gfs*11|1|0.15|ENSG00000179270|chr2:29072552-29072552|C/-|frameshift_variant'] 120761 14201 VGAYLPHAEL True PC9_epitope_Rep4 1068.56039516876 1068.55928993586 62.531 2 -0.7550418294102301 0.22819767441860464 1.0 ['nc|ENSG00000138162|O95359-3|TACC2', 'ENSG00000138162|ENST00000369005|TACC2', 'TACC2|p.E1042Gfs*8|1|0.18|ENSG00000138162|chr10:122085620-122085621|-/G|frameshift_variant'] 82999 9477 PYHAYYRHKVS True H1975_Epitope_Rep1 1419.70476798667 1419.70366993586 41.37 2 -0.7550735273281097 0.22820573665944888 1.0 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1', 'SF3A1|p.R511Gfs*103|2|0.39|ENSG00000099995|chr22:30339001-30339001|G/-|frameshift_variant', 'ENST00000463818.1_1_22:30742246-30752805:-|nuORF'] 56269 14440 LDQINLQL True NCI_RA007_Epitope_Rep4 955.5338460677499 955.53274993586 62.892 2 -0.7550916925153658 0.22820573665944888 1.0 ['ENST00000313349.3_1_2:64862240-64862327:-|nuORF'] 15459 24983 EAPKKKHRRN True NCI_RA007_Epitope_Rep5 1262.7319857940197 1262.7308899358602 103.6 2 -0.755105827869495 0.22822524433107416 1.0 ['ENSG00000173976|ENST00000555633|RAX2'] 72455 19814 MTTRTYYTP True H1975_Epitope_Rep2 1132.5222954078802 1132.52065490379 82.195 3 -0.7551334006387517 0.22822524433107416 1.0 ['ENSG00000180155|ENST00000652477|LYNX1'] 33225 8460 GLADRCPAL True PC9_epitope_Rep2 914.4643866089399 914.46328993586 37.909 2 -0.7551922572683106 0.22822524433107416 1.0 ['ENSG00000107872|ENST00000369956|FBXL15'] 88561 24038 RAIKGFGGIG True PC9_epitope_Rep4 974.5661492555398 974.56504993586 100.93 2 -0.7552438984502958 0.228249425372581 1.0 ['ENST00000424266.6_1_6:41040043-41040205:-|nuORF', 'ENST00000479950.5_1_6:41039388-41040205:-|nuORF', 'ENST00000486443.5_1_6:41038950-41040205:-|nuORF', 'ENST00000463088.5_1_6:41039005-41040205:-|nuORF'] 82418 7907 PVARPQAMA True PC9_epitope_Rep1 939.4960210903898 939.49492993586 35.24 2 -0.7553298083385873 0.228249425372581 1.0 ['ENST00000475589.1_1_15:43886371-43886566:+|nuORF', 'ENST00000481666.1_1_15:43886371-43886950:+|nuORF'] 9487 10896 AVYSVEHDVP True H1975_Epitope_Rep3 1114.5294889633 1114.52838993586 46.996 2 -0.7553429700173884 0.228249425372581 1.0 ['ENSG00000168263|ENST00000382082|KCNV2'] 134006 24709 WPRRKRAVG True NCI_RA007_Epitope_Rep5 1124.6679289854799 1124.6673749679298 102.53 1 -0.7553546104646179 0.228249425372581 1.0 ['ENSG00000140534|ENST00000268138|TICRR', 'nc|ENSG00000140534|Q7Z2Z1-2|TICRR'] 80608 10344 PLPGRDEGP True PC9_epitope_Rep1 936.4664947839199 936.46538993586 44.669 2 -0.7553637300598477 0.228249425372581 1.0 ['nc|ENSG00000175221|Q9Y2X0-3|MED16'] 136921 8225 YKDLTKINNMY True NCI_RA007_Epitope_Rep2 1401.69623701857 1401.6951299358602 36.63 2 -0.7553816786642202 0.228249425372581 1.0 ['ENST00000421254.1_1_1:117569228-117575092:-|nuORF'] 16202 4811 EEFLQQYNHYK True NCI_RA007_Epitope_Rep2 1497.68884313901 1497.68719490379 23.34 3 -0.7555306438076286 0.2283464566929134 1.0 ['ENSG00000198301|ENST00000356260|SDAD1'] 104643 13716 SSWWTRNWWWF True H1975_Epitope_Rep3 1640.7313170876798 1640.7296849037903 58.055 3 -0.7555418936394578 0.2283464566929134 1.0 ['ENST00000573520.5_1_16:4521405-4524561:-|nuORF', 'ENST00000571291.5_1_16:4519639-4524561:-|nuORF', 'ENST00000283429.10_1_16:4519403-4524606:-|nuORF', 'ENST00000404295.7_1_16:4519400-4524561:-|nuORF', 'ENST00000574733.5_1_16:4519403-4524387:-|nuORF'] 95935 4997 SDYEVAEKIWF True NCI_RA007_Epitope_Rep2 1385.6503323719696 1385.6486849037901 24.061 3 -0.7555882286299375 0.22837272754233517 1.0 ['ARAP2-PDS5A|1|fusion', 'ENSG00000047365|ENST00000303965|ARAP2', 'ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 54960 4169 LAHRLRRRH True NCI_RA007_Epitope_Rep5 1213.73807423397 1213.73641490379 22.557 3 -0.755664907188851 0.2284138258277851 1.0 ['nc|ENSG00000141644|Q9UIS9-9|MBD1'] 119006 5549 VEFRNFKIIYR True NCI_RA007_Epitope_Rep1 1483.8299684997899 1483.8283349037902 25.655 3 -0.7557342178777632 0.2284994068801898 1.0 ['ENSG00000042753|ENST00000263270|AP2S1'] 4990 10629 ALKRTLQLI True NCI_RA007_Epitope_Rep3 1054.6862643882198 1054.6851699358601 48.856 2 -0.7557795551242874 0.22852228581596037 1.0 ['ENST00000368966.9_3_6:109615628-109650288:+|nuORF'] 45550 5127 ISGFVFRHEIK True NCI_RA007_Epitope_Rep2 1331.7350054857895 1331.73334490379 24.565 3 -0.7557801228465725 0.22852228581596037 1.0 ['ENSG00000156298|ENST00000378482|TSPAN7', 'ENST00000471410.5_1_X:38422267-38546918:+|nuORF'] 101991 9106 SPNRQWDE True PC9_epitope_Rep1 1030.4468219684998 1030.44572993586 39.878 2 -0.7558580595991429 0.22854855211067124 1.0 ['ENSG00000198265|ENST00000358691|HELZ', 'nc|ENSG00000198265|P42694-2|HELZ', 'HELZ|p.T789Yfs*7|1|0.19|ENSG00000198265|chr17:67149977-67149978|-/A|frameshift_variant'] 91801 25199 RPLLLVVRSRI True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 104.35 3 -0.7559533211521748 0.22855660167543926 1.0 ['ENST00000545387.6_1_19:49298344-49298500:-|nuORF'] 91604 20511 RPDLLCQRR True H1975_Epitope_Rep2 1155.6294948714299 1155.62785490379 84.983 3 -0.755969786651973 0.22855660167543926 1.0 ['ENST00000583283.1_1_17:61904916-61905045:+|nuORF'] 78604 16702 PDSFNIPGSS True PC9_epitope_Rep5 1019.45598966987 1019.4554749679301 69.25 1 -0.756032555219852 0.2285680396168787 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 90182 13192 RHGQEHVEVY True NCI_RA007_Epitope_Rep3 1252.59488318452 1252.59378993586 59.162 2 -0.7561070628210167 0.22861717742294177 1.0 ['nc|ENSG00000184470|Q9NNW7-4|TXNRD2', 'nc|ENSG00000184470|Q9NNW7-3|TXNRD2', 'ENST00000494454.5_1_22:19864636-19903590:-|nuORF', 'ENST00000400518.5_2_22:19864636-19919892:-|nuORF', 'nc|ENSG00000184470|Q9NNW7-2|TXNRD2', 'ENST00000400525.6_1_22:19864636-19929326:-|nuORF', 'ENSG00000184470|ENST00000400521|TXNRD2', 'ENST00000462330.5_1_22:19864636-19868612:-|nuORF', 'ENST00000462843.2_1_22:19864636-19868414:-|nuORF', 'ENST00000495655.2_1_22:19864636-19868294:-|nuORF', 'ENST00000485358.5_1_22:19864636-19868612:-|nuORF', 'ENST00000487165.5_1_22:19864636-19870997:-|nuORF'] 31197 21808 GDIVMTQSPL True PC9_epitope_Rep4 1059.52704643515 1059.5259499358601 92.081 2 -0.7561077659968499 0.22861717742294177 1.0 ['nc|ENSG00000244116|A0A075B6P5|IGKV2-28'] 82906 7226 PVYYWHKLE True NCI_RA007_Epitope_Rep4 1233.61824439805 1233.6171499358602 34.427 2 -0.7561222367489061 0.22861717742294177 1.0 ['ENSG00000101842|ENST00000217957|VSIG1', 'nc|ENSG00000101842|Q86XK7-2|VSIG1'] 106228 4473 SVPPAAEPVP True H1975_Epitope_Rep3 962.5072969667399 962.50618993586 22.325 2 -0.7561330337309341 0.2286286137879911 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 136055 21932 YFTNELKQF True PC9_epitope_Rep2 1188.5815245361598 1188.5804299358601 89.838 2 -0.756148419656005 0.22862988110415988 1.0 ['ENST00000466777.1_1_3:172236192-172241222:-|nuORF'] 120397 11340 VFSKWELPNP True H1975_Epitope_Rep1 1215.6288090817498 1215.6277099358601 48.596 2 -0.7562133595530265 0.22862988110415988 1.0 ['PAPOLA|p.W281L|1|0.57|ENSG00000090060|chr14:96534496-96534496|G/T|missense_variant'] 33630 10702 GLNDILVK True NCI_RA007_Epitope_Rep2 870.51746772762 870.51636993586 46.229 2 -0.7562328198016023 0.22862988110415988 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 131040 15967 VVLLRARPVI True PC9_epitope_Rep6 1134.76009803482 1134.7584449037902 73.716 3 -0.7562699014033439 0.22862988110415988 1.0 ['ENSG00000144668|ENST00000264741|ITGA9'] 133541 6967 WHKREILEREK True NCI_RA007_Epitope_Rep4 1522.8368447853798 1522.8352049037899 33.424 3 -0.7563523466948178 0.228685790527018 1.0 ['CCDC102B|p.D364H|1|0.13|ENSG00000150636|chr18:68897255-68897255|G/C|missense_variant'] 42573 8642 IESPQVETE True H1975_Epitope_Rep2 1030.4818700645399 1030.48076993586 38.2 2 -0.7563655182211821 0.22870526846334016 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 19616 5589 ELRQDYRRYLT True H1975_Epitope_Rep1 1511.7844748593498 1511.78281490379 26.564 3 -0.7563781946273836 0.22870526846334016 1.0 ['nc|ENSG00000104218|Q1MSJ5-1|CSPP1', 'ENSG00000104218|ENST00000678616|CSPP1', 'nc|ENSG00000104218|Q1MSJ5|CSPP1'] 125449 10585 VLTTNETL True PC9_epitope_Rep3 889.4756624852901 889.47456993586 45.662 2 -0.7563782462387758 0.22870526846334016 1.0 ['ENST00000609318.5_1_10:858775-858832:-|nuORF'] 42838 21886 IFLLVLYL True PC9_epitope_Rep4 992.6310409278799 992.6299499358599 92.395 2 -0.7564313922101027 0.22871331159205455 1.0 ['ENSG00000146242|ENST00000369750|TPBG'] 56605 6107 LDYEIRYYEKE True PC9_epitope_Rep1 1519.7194745609497 1519.71781490379 28.305 3 -0.7564684585175442 0.22871331159205455 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'nc|ENSG00000154928|P54762-5|EPHB1'] 2991 21355 AFMEPRYHVRR True PC9_epitope_Rep5 1460.745921606 1460.74426490379 87.201 3 -0.7565817806083757 0.2287395680467233 1.0 ['ENSG00000222036|ENST00000547889|POTEM', 'nc|ENSG00000198062|Q6S545-2|POTEH', 'nc|ENSG00000187537|Q6S5H5-4|POTEG', 'nc|ENSG00000278522|A0JP26-2|POTEB3', 'nc|ENSG00000187537|Q6S5H5-2|POTEG', 'ENSG00000187537|ENST00000547848|POTEG', 'ENSG00000183206|ENST00000358970|POTEC', 'nc|ENSG00000278522|A0JP26-3|POTEB3', 'ENSG00000233917|ENST00000439682|POTEB', 'ENSG00000230031|ENST00000454856|POTEB2', 'ENSG00000198062|ENST00000343518|POTEH', 'ENSG00000278522|ENST00000611217|POTEB3'] 88118 1719 QWEKLYTWH True PC9_epitope_Rep5 1289.6193070272097 1289.61766490379 9.5167 3 -0.756688588596238 0.22875565107833692 1.0 ['ENSG00000083093|ENST00000261584|PALB2'] 120465 16804 VFVFGPDK True PC9_epitope_Rep1 907.4803539429098 907.47924993586 69.461 2 -0.7567035263232983 0.22875565107833692 1.0 ['ENSG00000117592|ENST00000340385|PRDX6'] 80168 15045 PKVKNNVEIDE True PC9_epitope_Rep6 1283.6721304457099 1283.6710299358601 69.909 2 -0.7567103073893641 0.22875565107833692 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 99866 11322 SLHGQRELRR True NCI_RA007_Epitope_Rep1 1250.6956002852999 1250.6945099358602 48.011 2 -0.7567212500227254 0.22875565107833692 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant', 'KMT2D|p.A3440Vfs*11|1|0.21|ENSG00000167548|chr12:49034848-49034848|G/-|frameshift_variant', 'KMT2D|p.Q3370Pfs*53|2|0.24|ENSG00000167548|chr12:49037247-49037248|-/G|frameshift_variant', 'KMT2D|p.V3089Wfs*30|1|0.39|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant', 'KMT2D|p.R3082Gfs*14|1|0.2|ENSG00000167548|chr12:49038108-49038112|TCCCG/-|frameshift_variant', 'KMT2D|p.R2687Qfs*4|1|0.4|ENSG00000167548|chr12:49039604-49039604|C/-|frameshift_variant', 'KMT2D|p.S2590Wfs*56|1|0.29|ENSG00000167548|chr12:49039976-49040001|GCTGCTGGGCCCCAGGGGGCTGCCCG/-|frameshift_variant', 'KMT2D|p.G2178Wfs*24|1|0.33|ENSG00000167548|chr12:49041238-49041239|-/A|frameshift_variant', 'KMT2D|p.P2302Qfs*20|2|0.26|ENSG00000167548|chr12:49040865-49040865|G/-|frameshift_variant', 'KMT2D|p.P2276Hfs*10|1|0.1|ENSG00000167548|chr12:49040943-49040943|G/-|frameshift_variant', 'KMT2D|p.Y2199Ifs*65|1|0.16|ENSG00000167548|chr12:49041176-49041176|G/-|frameshift_variant', 'KMT2D|p.A1770Cfs*18|1|0.32|ENSG00000167548|chr12:49043883-49043884|-/A|frameshift_variant', 'KMT2D|p.A1390Gfs*42|1|0.26|ENSG00000167548|chr12:49048032-49048033|-/C|frameshift_variant', 'KMT2D|p.K1350Rfs*5|1|0.25|ENSG00000167548|chr12:49048734-49048741|CTCCTCCT/-|frameshift_variant', 'KMT2D|p.G1235Vfs*95|1|0.3|ENSG00000167548|chr12:49049884-49049884|C/-|frameshift_variant', 'KMT2D|p.E1171Nfs*41|1|0.27|ENSG00000167548|chr12:49050078-49050078|G/-|frameshift_variant', 'KMT2D|p.D1156Pfs*27|1|0.43|ENSG00000167548|chr12:49050122-49050123|CC/-|frameshift_variant', 'KMT2D|p.P998Lfs*2|1|0.18|ENSG00000167548|chr12:49050595-49050595|G/-|frameshift_variant', 'KMT2D|p.P710Hfs*21|1|0.33|ENSG00000167548|chr12:49051554-49051555|-/T|frameshift_variant', 'KMT2D|p.G921Wfs*48|2|0.31|ENSG00000167548|chr12:49050922-49050923|-/A|frameshift_variant', 'KMT2D|p.P647Hfs*283|1|0.15|ENSG00000167548|chr12:49051743-49051743|G/-|frameshift_variant', 'KMT2D|p.Q773Sfs*157|1|0.27|ENSG00000167548|chr12:49051366-49051366|G/-|frameshift_variant', 'KMT2D|p.T382Lfs*20|1|0.12|ENSG00000167548|chr12:49052679-49052679|G/-|frameshift_variant', 'KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant'] 78609 14687 PDSFNIPGSS True PC9_epitope_Rep6 1019.45598966987 1019.4554749679301 68.425 1 -0.7567461102338495 0.2287670826786826 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 13017 11858 DLQQLQLFTEY True H1975_Epitope_Rep1 1396.68744615668 1396.68634993586 50.609 2 -0.7568104495245461 0.22878781142086463 1.0 ['ENSG00000184743|ENST00000398868|ATL3'] 64769 12372 LRRYQQQVRRR True NCI_RA007_Epitope_Rep2 1557.90765874021 1557.90601490379 52.729 3 -0.7568258649791989 0.22878781142086463 1.0 ['ENSG00000173237|ENST00000683896|C11orf86'] 72161 20751 MRKWPRQYEWF True H1975_Epitope_Rep3 1625.79253744525 1625.79144993586 86.705 2 -0.7568425979171249 0.22878781142086463 1.0 ['ENSG00000175874|ENST00000324768|CREG2', 'TLK1-CREG2|2|fusion', 'TLK1-CREG2|1|fusion', 'TLK1-CREG2|3|fusion'] 1611 7877 AEFSLHCETNL True PC9_epitope_Rep2 1262.5601374685798 1262.55904993586 35.666 2 -0.756865352439476 0.22878781142086463 1.0 ['ENSG00000139318|ENST00000279488|DUSP6'] 21936 17948 ESIIRMTEL True PC9_epitope_Rep4 1090.5692456003 1090.5681499358602 77.09 2 -0.7568742729988671 0.22878781142086463 1.0 ['ENST00000548443.2_14:19856929-19857043:-|nuORF'] 33856 18931 GLVLSLEEQL True PC9_epitope_Rep5 1099.61249031127 1099.6113899358602 77.841 2 -0.7568891423782591 0.22878781142086463 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 3774 23040 AGTYEVRFFDE True PC9_epitope_Rep3 1332.59863115228 1332.5969849037901 93.891 3 -0.7568925496985778 0.22878781142086463 1.0 ['ENST00000460616.5_1_X:153061851-153063636:+|nuORF', 'ENST00000485612.5_1_X:153061851-153063885:+|nuORF', 'ENSG00000180879|ENST00000370086|SSR4', 'ENST00000447375.1_1_X:153063080-153063885:+|nuORF'] 65576 17961 LSGGVPPYT True PC9_epitope_Rep5 889.45453311789 889.45342993586 74.104 2 -0.7569137278531026 0.2287992411891988 1.0 ['ENST00000434316.6_1_13:114193706-114203864:+|nuORF', 'ENST00000460039.5_1_13:114200078-114203864:+|nuORF'] 107840 5092 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 24.44 2 -0.756977389806219 0.2288254909225639 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 78936 16315 PFFFFFFFWRQ True NCI_RA007_Epitope_Rep1 1614.7812274022199 1614.78012993586 67.571 2 -0.757010017062434 0.22883691979370444 1.0 ['AluSc_dup13832|chr7:33006087-33006413:-|3.1359140164592656|0.4159080058002372|2.91|502.0|11|1|anti-sense'] 80503 8959 PLLKTLKSA True NCI_RA007_Epitope_Rep2 969.6222671493299 969.6211699358599 39.468 2 -0.7570200707967273 0.2288483483260963 1.0 ['ENST00000397988.7_1_18:61645690-61649045:+|nuORF'] 84377 8635 QGANIKQL True PC9_epitope_Rep5 870.4923156089401 870.49120993586 38.157 2 -0.7571017837460235 0.2288597765197546 1.0 ['ENST00000486986.6_1_1:151752280-151755498:-|nuORF', 'nc|ENSG00000182134|Q9Y2W6-3|TDRKH', 'ENSG00000182134|ENST00000368824|TDRKH'] 76970 12043 NVQFQTQSL True PC9_epitope_Rep1 1063.52982331647 1063.5287299358602 51.183 2 -0.7573266536161682 0.2289499422068107 1.0 ['nc|ENSG00000175471|Q6DN14-4|MCTP1', 'nc|ENSG00000175471|Q6DN14-2|MCTP1', 'ENSG00000175471|ENST00000515393|MCTP1'] 60457 17117 LILKPVTSP True PC9_epitope_Rep1 966.61136811246 966.61026993586 70.665 2 -0.7573351420087213 0.2289499422068107 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 75960 18195 NRGLIRRPK True NCI_RA007_Epitope_Rep5 1108.69414373332 1108.69304993586 76.797 2 -0.757348649021457 0.2289499422068107 1.0 ['ENST00000396757.5_1_9:35615990-35616170:-|nuORF'] 82970 19931 PYANYTFNV True PC9_epitope_Rep4 1087.49746055903 1087.49687496793 84.8 1 -0.7573502036740338 0.2289499422068107 1.0 ['nc|ENSG00000146904|P21709-2|EPHA1', 'nc|ENSG00000146904|P21709-3|EPHA1', 'ENSG00000146904|ENST00000275815|EPHA1'] 61990 11821 LLLQFHRTSEK True NCI_RA007_Epitope_Rep2 1370.7670338900596 1370.7659299358602 50.581 2 -0.7573839216813348 0.22896136804824918 1.0 ['ENST00000452075.7_1_10:43015418-43015709:-|nuORF'] 45031 19245 IQMFFVHAF True PC9_epitope_Rep1 1138.5633723742199 1138.56226993586 78.826 2 -0.7574053354978973 0.22897279355106395 1.0 ['ENSG00000176900|ENST00000322049|OR51T1'] 62623 10942 LLVNVLKA True NCI_RA007_Epitope_Rep3 868.57458868092 868.57348993586 50.126 2 -0.7574191382442121 0.22897743269074045 1.0 ['ENST00000206423.7_2_3:112318997-112319114:-|nuORF'] 134649 9659 WWHSYWRVWIY True NCI_RA007_Epitope_Rep1 1680.79900272468 1680.7979099358602 41.569 2 -0.7574500613866357 0.22897743269074045 1.0 ['ENST00000295992.7_1_3:142606565-142606607:-|nuORF'] 120670 9500 VGAPGYSR True PC9_epitope_Rep2 805.40825163181 805.40714993586 41.885 2 -0.7574911170113285 0.22897743269074045 1.0 ['ENSG00000112293|ENST00000230036|GPLD1'] 84382 12117 QGAVGPEV True PC9_epitope_Rep4 755.38136817763 755.38026993586 54.416 2 -0.7576430246036403 0.22901849217638692 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 115418 5571 TVFAAAEE True NCI_RA007_Epitope_Rep4 836.39159850816 836.39050993586 28.03 2 -0.7577500115244209 0.2290891849042066 1.0 ['ENSG00000038219|ENST00000040738|BOD1L1', 'BOD1L1|p.E1582Q|1|0.5|ENSG00000038219|chr4:13602156-13602156|C/G|missense_variant'] 18215 13830 EIRNAFDL True PC9_epitope_Rep3 976.4977949121999 976.49668993586 58.278 2 -0.7578002489362706 0.2291154245073344 1.0 ['MPHOSPH8|p.E499Lfs*9|1|0.24|ENSG00000196199|chr13:19650177-19650187|ACGAAACGGAT/-|frameshift_variant', 'MPHOSPH8|p.P750Qfs*58|1|0.38|ENSG00000196199|chr13:19668445-19668445|T/-|frameshift_variant', 'ENSG00000196199|ENST00000361479|MPHOSPH8', 'nc|ENSG00000196199|Q99549-2|MPHOSPH8'] 98917 7381 SIYDTKRNEK True H1975_Epitope_Rep1 1252.6411646706 1252.63951490379 33.395 3 -0.7578452438474685 0.22918271795175724 1.0 ['nc|ENSG00000159625|Q8IY82-2|DRC7', 'ENSG00000159625|ENST00000360716|DRC7'] 3310 6694 AGGLYGID True H1975_Epitope_Rep3 764.37046914076 764.36992496793 30.704 1 -0.7578474930417007 0.22918271795175724 1.0 ['ENSG00000198722|ENST00000635942|UNC13B', 'UBAP1-UNC13B|1|fusion', 'nc|ENSG00000198722|O14795|UNC13B', 'nc|ENSG00000198722|O14795-2|UNC13B'] 80632 6887 PLPMTPVP True H1975_Epitope_Rep3 850.4622613506199 850.46116993586 31.451 2 -0.7578903964727483 0.22922037514445728 1.0 ['nc|ENSG00000159374|Q8TC57-3|M1AP', 'ENST00000464686.5_1_2:74785845-74804048:-|nuORF', 'nc|ENSG00000159374|Q8TC57-4|M1AP', 'ENSG00000159374|ENST00000421985|M1AP'] 90938 15653 RLFPCWGDH True PC9_epitope_Rep1 1129.5127337836898 1129.51108490379 65.029 3 -0.7578912754052514 0.22922037514445728 1.0 ['ENST00000419248.5_2_17:1627955-1628000:+|nuORF'] 110336 9734 TIKFDLQVEH True PC9_epitope_Rep2 1228.6451874218799 1228.6435349037902 42.783 3 -0.7580040661495862 0.2292614267723535 1.0 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000556641.5_1_14:99959014-99967243:+|nuORF', 'ENST00000557165.5_1_14:99959014-99968584:+|nuORF'] 10449 12715 CLYYFKKLCI True PC9_epitope_Rep4 1292.6661231905998 1292.66446490379 56.762 3 -0.7580245432516384 0.22926605232747638 1.0 ['ENST00000379066.5_1_2:37544226-37544932:-|nuORF'] 4040 19680 AHLLSWFSP True NCI_RA007_Epitope_Rep4 1056.53926580136 1056.5381699358602 85.047 2 -0.7580526703038952 0.22926605232747638 1.0 ['ENSG00000172893|ENST00000355527|DHCR7'] 120240 6993 VFNSPGHSL True PC9_epitope_Rep4 956.4715801643599 956.47048993586 34.145 2 -0.7580819945169406 0.22926605232747638 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2'] 45959 19587 ISSPFRYERKM True PC9_epitope_Rep5 1412.7234548259196 1412.7223499358602 80.393 2 -0.7581280052806934 0.22927067747144486 1.0 ['ENSG00000184845|ENST00000393752|DRD1'] 12193 11178 DIMKYLFMLLS True H1975_Epitope_Rep3 1372.7134673058397 1372.7123699358601 48.094 2 -0.7581293863959488 0.22927067747144486 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 133600 5742 WILWYHWMRGR True NCI_RA007_Epitope_Rep1 1602.8030425593 1602.80140490379 26.393 3 -0.7581551354368292 0.22927067747144486 1.0 ['ENST00000464699.5_1_2:27666013-27666819:+|nuORF'] 45336 13325 ISDDIDDP True PC9_epitope_Rep6 888.3712569864 888.37014993586 62.912 2 -0.7581979994094193 0.22929690972119346 1.0 ['ENSG00000154059|ENST00000284202|IMPACT'] 24998 58 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 0.34807 2 -0.7582568654428631 0.22931974401516947 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 45179 15910 IRELYRRRYPR True H1975_Epitope_Rep3 1576.9062617578797 1576.9051699358602 66.646 2 -0.7582751221668057 0.22931974401516947 1.0 ['nc|ENSG00000078043|O75928-2|PIAS2'] 62023 11213 LLLTVIVL True PC9_epitope_Rep4 882.6153908637399 882.61428993586 50.907 2 -0.7583379370078537 0.22934597437226872 1.0 ['ENST00000550709.5_2_12:49717891-49718032:+|nuORF'] 68337 6960 LTSDNDRLR True NCI_RA007_Epitope_Rep2 1088.55743504664 1088.55632993586 31.694 2 -0.7583650159438415 0.22935181893589288 1.0 ['nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA', 'nc|ENSG00000245848|P49715-3|CEBPA'] 25420 13866 FEKTFQLKEK True NCI_RA007_Epitope_Rep1 1296.70778767844 1296.7066899358601 57.955 2 -0.7583870476500042 0.22935181893589288 1.0 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS'] 139033 18887 YSILEELW True NCI_RA007_Epitope_Rep5 1051.52261267771 1051.52207496793 79.495 1 -0.7584296295808315 0.22935181893589288 1.0 ['ENSG00000197779|ENST00000338637|ZNF81', 'nc|ENSG00000127081|Q5JVG2-2|ZNF484', 'ENSG00000127081|ENST00000375495|ZNF484', 'nc|ENSG00000127081|Q5JVG2-3|ZNF484'] 79571 15543 PGTEFSLGP True PC9_epitope_Rep2 903.4337976733099 903.43270993586 65.058 2 -0.758434760168561 0.22935181893589288 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.Q2344Kfs*48|2|0.43|ENSG00000091656|chr8:76853949-76853949|C/-|frameshift_variant', 'ZFHX4|p.P2910Qfs*27|1|0.24|ENSG00000091656|chr8:76855647-76855647|C/-|frameshift_variant', 'ZFHX4|p.A2982Qfs*10|1|0.33|ENSG00000091656|chr8:76855863-76855863|G/-|frameshift_variant', 'ZFHX4|p.D1753Y|1|0.5|ENSG00000091656|chr8:76852178-76852178|G/T|missense_variant'] 61000 6500 LLALHSAA True PC9_epitope_Rep1 794.4650382319401 794.46394993586 29.805 2 -0.7584352200835586 0.22935181893589288 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 117795 11943 VALYQVHYEWW True NCI_RA007_Epitope_Rep4 1492.71393568804 1492.71282993586 52.939 2 -0.7584706743339826 0.22935181893589288 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2'] 10338 22881 CIKWRRRRRRR True PC9_epitope_Rep4 1640.9858665745999 1640.98423490379 96.229 3 -0.7584793763352181 0.22935181893589288 1.0 ['ENST00000303961.8_1_19:41306371-41306464:+|nuORF'] 53169 10867 KSRTRWIHSQI True NCI_RA007_Epitope_Rep1 1410.7844152896998 1410.7827749037901 46.261 3 -0.7584986048532971 0.22935983647836006 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|56|2|sense'] 128021 14987 VRRFRKRPE True NCI_RA007_Epitope_Rep5 1242.7421565549 1242.74050490379 64.316 3 -0.7585055869217272 0.22935983647836006 1.0 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR'] 85087 6605 QIQEDKKHEEA True NCI_RA007_Epitope_Rep2 1353.6524576302902 1353.6513699358602 30.301 2 -0.7585654324994667 0.22939068100358423 1.0 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C', 'nc|ENSG00000171988|Q15652-2|JMJD1C'] 16629 17752 EESLGEEIHYP True PC9_epitope_Rep2 1301.57756135453 1301.5764699358601 73.564 2 -0.7585715066384965 0.22939068100358423 1.0 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 121205 5585 VGGPADAKGP True PC9_epitope_Rep1 867.4450310633499 867.44392993586 26.311 2 -0.7585773560229901 0.22939068100358423 1.0 ['ENSG00000282936|ENST00000634965|unknown'] 117796 18226 VALYQVHYEWW True PC9_epitope_Rep2 1492.71393568804 1492.71282993586 75.425 2 -0.7585978911132414 0.22939068100358423 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2'] 104436 12404 SSLARGWILL True NCI_RA007_Epitope_Rep3 1114.6498788795 1114.6487899358601 55.997 2 -0.758762739650097 0.2294317155171137 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B'] 57788 7330 LEPFLFYLFSK True NCI_RA007_Epitope_Rep1 1402.7536752416997 1402.75201490379 32.506 3 -0.7588019907860712 0.22943972986182076 1.0 ['ENST00000369014.9_1_1:150595095-150595323:-|nuORF'] 76376 6678 NSIC[Carbamidomethyl]EM[Oxidation]NKIY True H1975_Epitope_Rep3 1286.56350925673 1286.5624099358602 30.642 2 -0.7588181590794791 0.22943972986182076 1.0 ['ENSG00000205846|ENST00000382073|CLEC6A', 'nc|ENSG00000205846|Q6EIG7-2|CLEC6A'] 127645 17208 VRELRGLG True NCI_RA007_Epitope_Rep1 898.5348491272598 898.53374993586 71.067 2 -0.7588675072237592 0.22945114185006368 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 100799 11404 SLRSLHLDP True PC9_epitope_Rep3 1036.56654317836 1036.5654499358602 48.868 2 -0.7589361851049702 0.22949217303733543 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 102072 3029 SPPRRARHGS True NCI_RA007_Epitope_Rep1 1119.6009716244698 1119.5998699358602 15.657 2 -0.7589997151409194 0.22953320300930039 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 41721 19629 IDNIAHIFGF True PC9_epitope_Rep4 1145.58694426977 1145.58584993586 83.619 2 -0.7590096808895094 0.2295412137547019 1.0 ['ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000590168.5_1_17:74467717-74469013:-|nuORF'] 91317 26089 RMGPPVGG True H1975_Epitope_Rep1 769.3904933926899 769.3899449679301 108.32 1 -0.7590427132929483 0.2295412137547019 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 68014 9511 LTMFCTTNSL True PC9_epitope_Rep5 1129.5147674992902 1129.51312490379 41.542 3 -0.7591217258550962 0.22958224117760304 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 14701 7292 DVQDQWIGP True H1975_Epitope_Rep3 1056.4876241513198 1056.48652993586 33.023 2 -0.7591450689508851 0.2295936500414643 1.0 ['ENST00000308744.10_1_4:72994598-73003853:+|nuORF', 'nc|ENSG00000056291|Q9Y5X5-4|NPFFR2'] 62876 24541 LMRFRKPWPLR True PC9_epitope_Rep1 1498.8707281962998 1498.86962993586 99.255 2 -0.7591703146343104 0.22959825857754215 1.0 ['ENST00000422351.5_1_2:43266302-43266656:-|nuORF'] 107843 5403 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 25.616 2 -0.7591734821555809 0.22959825857754215 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 24944 18541 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 76.906 2 -0.7592779482092873 0.22959825857754215 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 112059 17414 TLTELRRVHP True H1975_Epitope_Rep2 1220.6989543302398 1220.6978499358602 72.276 2 -0.759316216687579 0.22960966652846057 1.0 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000513806.1_1_4:3230649-3237073:+|nuORF'] 125466 20108 VLVADFLEQN True NCI_RA007_Epitope_Rep3 1146.5920892198599 1146.59044490379 87.624 3 -0.7593532507505677 0.2296210741415308 1.0 ['ENSG00000102547|ENST00000409308|CAB39L'] 18561 15210 EKVLDEFSKQ True PC9_epitope_Rep1 1221.62411762413 1221.6230299358601 63.326 2 -0.7594185178806008 0.22964728877306245 1.0 ['nc|ENSG00000106636|O15498-2|YKT6', 'ENST00000447123.5_1_7:44240734-44251164:+|nuORF', 'ENSG00000106636|ENST00000223369|YKT6'] 130660 19645 VVAVRHLGRWC True NCI_RA007_Epitope_Rep5 1294.7080795452998 1294.70698993586 82.478 2 -0.7594602747910019 0.2296564998519396 1.0 ['ENST00000549824.1_1_12:53142751-53143132:+|nuORF'] 32299 10803 GFVFGCGTL True PC9_epitope_Rep3 899.4211248146299 899.42002993586 46.521 2 -0.7594829840045966 0.2296564998519396 1.0 ['ENSG00000116237|ENST00000343813|ICMT', 'ICMT|p.W150Cfs*43|1|0.19|ENSG00000116237|chr1:6233478-6233479|-/A|frameshift_variant'] 55416 5325 LATFWYYAK True NCI_RA007_Epitope_Rep1 1161.5858816406098 1161.58478993586 24.79 2 -0.7594836507621395 0.2296564998519396 1.0 ['ENST00000534385.1_1_11:118272380-118277824:+|nuORF', 'ENSG00000167283|ENST00000300688|ATP5MG', 'ENST00000527186.1_1_11:118277587-118279810:+|nuORF'] 50481 568 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 3.0004 3 -0.7594846548478067 0.2296564998519396 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 130809 4417 VVEYECRPGYR True NCI_RA007_Epitope_Rep1 1369.6448701520499 1369.64323490379 21.292 3 -0.7594857879647441 0.2296564998519396 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 5729 15206 APAVVAIPG True PC9_epitope_Rep1 793.46978925921 793.46868993586 63.311 2 -0.7594862393592977 0.2296564998519396 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 80670 12637 PLPPVPASP True PC9_epitope_Rep3 873.4960040070499 873.49490993586 53.631 2 -0.7596262179781764 0.22968271124206038 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 124617 13296 VLHSSTPVP True PC9_epitope_Rep6 935.5076313199099 935.50652993586 62.797 2 -0.7596592649927727 0.2297089218560303 1.0 ['ZNF592|p.N563T|1|0.25|ENSG00000166716|chr15:84784363-84784363|A/C|missense_variant'] 132186 22535 VYIYIYTYLHI True PC9_epitope_Rep3 1459.77513896227 1459.7740499358601 91.954 2 -0.7596770887593376 0.2297351316938839 1.0 ['ENST00000498707.5_1_3:64502565-64502754:-|nuORF'] 64873 4789 LSAQPVQTK True NCI_RA007_Epitope_Rep5 970.54474510462 970.54364993586 25.106 2 -0.759721956536839 0.22975233527260885 1.0 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1', 'TJP1|p.H1559Lfs*17|1|0.27|ENSG00000104067|chr15:29708733-29708733|T/-|frameshift_variant', 'ENST00000462916.1_1_15:30024631-30025027:-|nuORF'] 46572 16656 ITRMSHRAW True PC9_epitope_Rep5 1156.59238108672 1156.59128993586 69.073 2 -0.759733849881264 0.22975233527260885 1.0 ['ENST00000538442.5_2_6:31478290-31478698:+|nuORF'] 124636 22176 VLIEILNPE True PC9_epitope_Rep3 1038.5961119711399 1038.5950099358602 90.585 2 -0.7597626294463548 0.22975233527260885 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|413|3|anti-sense'] 82254 10060 PTLKTTEWSI True PC9_epitope_Rep2 1174.6233893481399 1174.6217549037901 44.025 3 -0.7597654111826737 0.22975233527260885 1.0 ['ENST00000444388.5_1_22:27068741-27068789:+|nuORF'] 57804 14804 LEPLHILSKL True PC9_epitope_Rep3 1161.7121447828902 1161.71050490379 62.078 3 -0.7597774391324167 0.22975233527260885 1.0 ['ENST00000587091.5_2_X:73751613-73751946:+|nuORF'] 117340 10919 VAANQKGI True PC9_epitope_Rep6 799.4552018242299 799.45410993586 52.866 2 -0.7598002291916368 0.22975233527260885 1.0 ['ENSG00000178814|ENST00000618853|OPLAH', 'ENST00000527993.1_1_8:145108066-145109551:-|nuORF'] 36995 12828 GVRRSFRK True NCI_RA007_Epitope_Rep4 1004.5991807193199 1004.59808993586 56.426 2 -0.7598039046666805 0.22975233527260885 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'nc|ENSG00000007202|Q14667-3|BLTP2', 'ENST00000583860.1_1_17:26943312-26943762:-|nuORF'] 36202 18536 GVFTKRQRK True NCI_RA007_Epitope_Rep5 1118.6672602791398 1118.66667496793 78.125 1 -0.7598219946679141 0.22975233527260885 1.0 ['ENSG00000121053|ENST00000225371|EPX'] 45253 13602 IRRGFIML True NCI_RA007_Epitope_Rep4 1004.59534120884 1004.59424993586 59.532 2 -0.7598302263839637 0.22976033632851242 1.0 ['ENSG00000205810|ENST00000396439|KLRC3'] 36797 8661 GVPMTLCSP True PC9_epitope_Rep5 903.4194105624699 903.41830993586 38.258 2 -0.7598427311440307 0.22976033632851242 1.0 ['ENSG00000132256|ENST00000380034|TRIM5'] 78347 20496 PATLLEGPL True PC9_epitope_Rep3 909.5171333744499 909.51602993586 84.097 2 -0.7599118717039673 0.22979353215422185 1.0 ['ENST00000435712.1_1_10:131904549-131906742:+|nuORF'] 137554 10258 YLRTHEFPP True PC9_epitope_Rep5 1158.5821932425 1158.58054490379 44.444 3 -0.7599317126605567 0.22979353215422185 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 56929 13051 LEDSESSYE True H1975_Epitope_Rep3 1057.40876469393 1057.4076699358602 55.44 2 -0.7599468870773544 0.22979353215422185 1.0 ['nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1', 'nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1'] 83342 9893 QAPGQPLGPV True PC9_epitope_Rep5 962.5185303567798 962.51742993586 43.023 2 -0.7599964607983483 0.22979353215422185 1.0 ['ENST00000382172.3_1_13:24460628-24463343:-|nuORF'] 16940 7539 EGENRRREWKE True NCI_RA007_Epitope_Rep2 1487.72293723195 1487.72128490379 33.951 3 -0.760019063725469 0.22979353215422185 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2', 'ENST00000505524.1_1_5:36108630-36114563:-|nuORF'] 138533 15733 YRLRGKLR True NCI_RA007_Epitope_Rep2 1060.6617809758798 1060.66068993586 65.915 2 -0.7600540030347659 0.22979353215422185 1.0 ['nc|ENSG00000204655|Q16653-12|MOG', 'nc|ENSG00000204655|Q16653-4|MOG', 'nc|ENSG00000204655|Q16653-9|MOG', 'nc|ENSG00000204655|Q16653-8|MOG', 'nc|ENSG00000204655|Q16653-11|MOG', 'nc|ENSG00000204655|Q16653-2|MOG', 'nc|ENSG00000204655|Q16653-6|MOG', 'nc|ENSG00000204655|Q16653-3|MOG', 'nc|ENSG00000204655|Q16653-7|MOG', 'ENSG00000204655|ENST00000376917|MOG', 'nc|ENSG00000204655|Q16653-5|MOG', 'nc|ENSG00000204655|Q16653-13|MOG'] 31191 7923 GDIEIGSHR True H1975_Epitope_Rep1 982.48320747722 982.48210993586 35.427 2 -0.7600584860917721 0.22979353215422185 1.0 ['ENSG00000185950|ENST00000375856|IRS2'] 121269 15279 VGGVTSAW True H1975_Epitope_Rep3 775.38645355807 775.3859049679301 64.179 1 -0.7600634444071319 0.22979353215422185 1.0 ['ENST00000377102.5_1_13:80913192-80913657:-|nuORF'] 125467 21721 VLVADFLEQN True PC9_epitope_Rep6 1146.5920892198599 1146.59044490379 96.437 3 -0.7601335923516367 0.22979353215422185 1.0 ['ENSG00000102547|ENST00000409308|CAB39L'] 128037 24741 VRRHLGPT True NCI_RA007_Epitope_Rep5 934.5460825172999 934.54553496793 102.65 1 -0.76018837322759 0.22979353215422185 1.0 ['ENST00000486015.1_1_10:77162714-77167299:+|nuORF', 'ENST00000484411.1_1_10:77163655-77167299:+|nuORF', 'ENST00000425916.4_1_10:77163018-77167299:+|nuORF'] 86004 21054 QPILYGDF True PC9_epitope_Rep5 951.4701831820299 951.46908993586 86.044 2 -0.7602026844095912 0.22979353215422185 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 58161 7008 LESGPLAA True H1975_Epitope_Rep2 756.40176926904 756.40122496793 31.879 1 -0.7602153878324633 0.22979353215422185 1.0 ['ENSG00000099326|ENST00000215057|MZF1', 'nc|ENSG00000099326|P28698-3|MZF1'] 19005 12295 ELGFKRYNSL True PC9_epitope_Rep2 1225.64552177505 1225.64386490379 52.602 3 -0.7602235390663779 0.2298049314744102 1.0 ['nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF'] 97105 22735 SFCWKRKMEWW True PC9_epitope_Rep3 1585.7322456878098 1585.73114993586 92.715 2 -0.7602705192641717 0.22981633045717584 1.0 ['ENSG00000170092|ENST00000625065|SPDYE5', 'ENSG00000260097|ENST00000563237|SPDYE6'] 57556 12105 LELCIEVV True PC9_epitope_Rep3 916.49395540172 916.49284993586 51.604 2 -0.7602804122368131 0.22982092644664792 1.0 ['nc|ENSG00000059573|P54886-2|ALDH18A1', 'ENSG00000059573|ENST00000371224|ALDH18A1'] 119815 5992 VEVKIEEP True NCI_RA007_Epitope_Rep1 941.5069626135698 941.50586993586 27.351 2 -0.7602996513869223 0.22982092644664792 1.0 ['ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'nc|ENSG00000143624|Q68E01-3|INTS3', 'nc|ENSG00000143624|Q68E01-4|INTS3'] 48944 6178 KEYESYSDF True NCI_RA007_Epitope_Rep1 1166.4767846840998 1166.4756899358601 28.067 2 -0.7603295246155432 0.22982092644664792 1.0 ['ENSG00000021852|ENST00000371237|C8B'] 61649 5820 LLHGFGGG True NCI_RA007_Epitope_Rep4 756.39187329168 756.39076993586 29.012 2 -0.7603626089339188 0.2298471237661127 1.0 ['ENSG00000011198|ENST00000644371|ABHD5'] 78391 13071 PAVPAAAGL True PC9_epitope_Rep4 765.43848913093 765.43738993586 58.17 2 -0.7603851169057619 0.22985852128100395 1.0 ['ENST00000345901.7_2_17:3593972-3599357:-|nuORF', 'ENST00000550383.1_1_17:3594253-3599357:-|nuORF'] 61065 4894 LLAVSHVG True H1975_Epitope_Rep3 794.46503823194 794.46394993586 23.952 2 -0.7604504274645719 0.22987791342952274 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 111723 16370 TLPWAHLKAAP True PC9_epitope_Rep4 1203.67642798051 1203.6753299358602 70.931 2 -0.7604508540433724 0.22987791342952274 1.0 ['ENSG00000239697|ENST00000293825|TNFSF12'] 90862 14044 RKWYSPIKGKL True H1975_Epitope_Rep3 1374.8135901596595 1374.8119349037902 59.343 3 -0.7604810197519325 0.22987791342952274 1.0 ['nc|ENSG00000169604|Q9H6X2-5|ANTXR1', 'ENSG00000169604|ENST00000303714|ANTXR1'] 70495 12508 LYSSPFDPV True PC9_epitope_Rep6 1023.49131254943 1023.49020993586 59.539 2 -0.7605710729211371 0.2298893098141352 1.0 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion', 'ENST00000483194.1_1_2:32668601-32674013:+|nuORF'] 72557 11967 MVKEYMIQF True PC9_epitope_Rep4 1187.5718884525897 1187.5702349037902 53.824 3 -0.7606003841209145 0.22991550379567013 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 19135 8227 ELIPIPADSP True H1975_Epitope_Rep2 1050.55972646242 1050.5586299358602 36.596 2 -0.7606232247782122 0.2299268992867501 1.0 ['ENSG00000204291|ENST00000375001|COL15A1'] 78689 8243 PEDNFPDEEK True NCI_RA007_Epitope_Rep2 1218.5040620611 1218.5029699358602 36.7 2 -0.7606497774552972 0.22993829444058064 1.0 ['ENSG00000012983|ENST00000682126|MAP4K5', 'ENST00000554990.5_1_14:50886739-50915587:-|nuORF'] 118363 7645 VDGNTTVRVP True H1975_Epitope_Rep3 1056.55637241748 1056.55526993586 34.388 2 -0.760687811141948 0.22996448653447765 1.0 ['SERPINA4|p.E237G|1|0.4|ENSG00000100665|chr14:94567030-94567030|A/G|missense_variant'] 53038 24933 KRVISGGG True NCI_RA007_Epitope_Rep1 772.4555361773998 772.45498496793 103.19 1 -0.7607420632036985 0.2299906778532428 1.0 ['nc|ENSG00000166596|Q8N1V2-3|CFAP52', 'ENSG00000166596|ENST00000352665|CFAP52', 'nc|ENSG00000166596|Q8N1V2-2|CFAP52', 'ENST00000576630.5_1_17:9487588-9546512:+|nuORF'] 65196 4903 LSDWRNNTEYR True NCI_RA007_Epitope_Rep2 1452.6745900572 1452.67294490379 23.693 3 -0.7607827975431528 0.22999866830415933 1.0 ['ENSG00000138411|ENST00000644978|HECW2', 'LRP1B-HECW2|1|fusion'] 76763 4353 NTVKQAPDV True NCI_RA007_Epitope_Rep5 970.5083595958997 970.50726993586 23.355 2 -0.7607953637575539 0.22999866830415933 1.0 ['ENSG00000196220|ENST00000383836|SRGAP3', 'nc|ENSG00000196220|O43295-2|SRGAP3'] 131114 25629 VVNIRNLIEK True PC9_epitope_Rep1 1196.72410644892 1196.7235749679298 103.61 1 -0.7608186069681745 0.2300100615530303 1.0 ['ENST00000395603.7_1_X:76939207-76939318:-|nuORF'] 124041 24077 VKPQHRVPRP True NCI_RA007_Epitope_Rep2 1212.7203584811598 1212.7187249037902 101.16 3 -0.7608681798935611 0.2300214544647481 1.0 ['ENSG00000164500|ENST00000297001|SPATA48'] 55222 12005 LAPSEEDE True PC9_epitope_Rep3 888.3712569864 888.37014993586 51.203 2 -0.7608737341109324 0.23003284703932766 1.0 ['ENSG00000087263|ENST00000566157|OGFOD1', 'nc|ENSG00000087263|Q8N543-2|OGFOD1'] 44050 23309 ILLFRRPLPK True PC9_epitope_Rep1 1251.8179472641098 1251.81631490379 94.446 3 -0.7608888909155899 0.23003402870247078 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 127189 17476 VQFWKMLIL True H1975_Epitope_Rep2 1176.6729228231998 1176.6718299358602 72.512 2 -0.7609066122715108 0.23003402870247078 1.0 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 128727 7806 VSPPPGQSP True H1975_Epitope_Rep3 864.43413202648 864.43302993586 35.009 2 -0.7609521801581333 0.23003402870247078 1.0 ['SVA_D_dup717|chr9:87758582-87759887:-|1.1539223342303233|0.0972128594367668|3.57|448.0|26|3|sense'] 63448 13605 LPGVAGAVG True PC9_epitope_Rep6 739.42283906679 739.42229496793 64.087 1 -0.7610057391138031 0.23003402870247078 1.0 ['ENSG00000164692|ENST00000297268|COL1A2'] 140524 16596 YYKDGEALKYW True PC9_epitope_Rep5 1434.6819668534197 1434.68032490379 68.842 3 -0.7610603881544373 0.23003861346589144 1.0 ['ENSG00000179639|ENST00000693622|FCER1A'] 83655 10853 QEAETCETPDP True H1975_Epitope_Rep2 1218.47104768066 1218.46994993586 46.775 2 -0.7610721621316477 0.23003861346589144 1.0 ['ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 44126 5483 ILNSFEHEFLS True H1975_Epitope_Rep1 1334.65066672514 1334.6495699358602 26.151 2 -0.7610822926769304 0.23003861346589144 1.0 ['ENSG00000014138|ENST00000265465|POLA2', 'ENST00000532469.1_1_11:65029724-65047127:+|nuORF'] 50482 823 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 4.3181 3 -0.7611647237675463 0.2300579915971359 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 47946 6308 KAAAKALK True PC9_epitope_Rep6 799.5279728416699 799.52686993586 32.801 2 -0.7611715230159696 0.2300579915971359 1.0 ['nc|ENSG00000185946|Q96LT9-2|RNPC3', 'ENSG00000185946|ENST00000423855|RNPC3'] 100096 8312 SLKVSNDGP True PC9_epitope_Rep6 915.4661604307499 915.46506993586 41.601 2 -0.7611759020854014 0.2300579915971359 1.0 ['nc|ENSG00000185664|P40967-4|PMEL', 'nc|ENSG00000185664|P40967-5|PMEL', 'ENSG00000185664|ENST00000548747|PMEL', 'nc|ENSG00000185664|P40967-2|PMEL', 'ENST00000549413.1_1_12:56355068-56359795:-|nuORF', 'ENST00000550590.5_1_12:56352149-56359825:-|nuORF'] 82701 9204 PVPFTNGEIQK True PC9_epitope_Rep4 1228.6451874218799 1228.6435349037902 43.0 3 -0.7612164903866137 0.23008417533322484 1.0 ['ENSG00000109062|ENST00000262613|NHERF1', 'nc|ENSG00000109062|O14745-2|NHERF1'] 47356 15158 IYHREEKRWRW True NCI_RA007_Epitope_Rep1 1657.8589772122898 1657.8578899358602 63.032 2 -0.7612265801977773 0.23009216112664388 1.0 ['nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 68781 5323 LVDPQASPP True NCI_RA007_Epitope_Rep2 922.47599683846 922.47488993586 25.327 2 -0.7612292680211494 0.23009216112664388 1.0 ['ENST00000376150.3_1_X:49460477-49460564:-|nuORF'] 112266 20393 TLYRIELL True PC9_epitope_Rep5 1019.6015317047498 1019.60042993586 83.478 2 -0.7613303486500684 0.23011834319526628 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'ENSG00000124177|ENST00000373233|CHD6'] 134971 10506 YAFWGAASF True PC9_epitope_Rep4 1018.4548674710599 1018.45376993586 48.134 2 -0.7613781608477959 0.23015591254696607 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 120195 13840 VFLPLHWFP True PC9_epitope_Rep1 1154.62768688294 1154.62658993586 58.079 2 -0.7613981741777929 0.23015591254696607 1.0 ['ENST00000515684.1_1_4:48712603-48782104:-|nuORF'] 104535 3197 SSSDSSSDSD True PC9_epitope_Rep1 972.31559258508 972.31504496793 17.178 1 -0.761443749428062 0.23018209251068739 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4', 'ENSG00000130382|ENST00000252674|MLLT1'] 30338 15832 GADSVIME True H1975_Epitope_Rep1 820.36366950816 820.36312496793 66.206 1 -0.7615650356486887 0.23021625299529627 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D'] 36576 13969 GVLEPLQK True H1975_Epitope_Rep1 882.5174677276199 882.51636993586 58.889 2 -0.7615790050694825 0.23021625299529627 1.0 ['ENST00000378204.6_1_8:119123785-119123992:-|nuORF'] 72737 6678 MYTGGVSSLAE True H1975_Epitope_Rep2 1113.50122561013 1113.50012993586 30.596 2 -0.7615849867401301 0.23021625299529627 1.0 ['nc|ENSG00000243156|Q7RTP6-5|MICAL3'] 106711 3434 SYCFKEKKCKK True NCI_RA007_Epitope_Rep1 1390.7101132608998 1390.70845490379 17.259 3 -0.7616339488393071 0.23022657359204923 1.0 ['nc|ENSG00000196159|Q6V0I7-2|FAT4'] 65792 13180 LSITNNPSAL True PC9_epitope_Rep4 1028.55022440788 1028.54912993586 58.595 2 -0.7616643216206002 0.23022657359204923 1.0 ['ENSG00000110851|ENST00000228437|PRDM4'] 30759 6084 GAPCSSPGPSL True PC9_epitope_Rep2 971.43823143075 971.43712993586 28.794 2 -0.7616746295779316 0.23022657359204923 1.0 ['nc|ENSG00000167608|Q7Z404|TMC4'] 62254 13227 LLQENLEKLK True NCI_RA007_Epitope_Rep1 1226.72343774258 1226.7223499358602 55.448 2 -0.7617122152090607 0.23022657359204923 1.0 ['ENSG00000134516|ENST00000520908|DOCK2'] 128216 25645 VRVGALLL True PC9_epitope_Rep5 839.5592729699499 839.5587249679301 103.98 1 -0.7617259207201574 0.23022657359204923 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 67318 16073 LTDPVLFT True H1975_Epitope_Rep3 904.49058427344 904.49003496793 67.281 1 -0.7617403045472326 0.23022657359204923 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'ADGRL2|p.A1202Rfs*21|1|0.14|ENSG00000117114|chr1:81987006-81987025|CAGCTCCTGTATTTAACTCA/-|frameshift_variant', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2'] 99092 14519 SLADVILLQT True PC9_epitope_Rep6 1071.6175756917098 1071.61646993586 67.732 2 -0.7617521211712023 0.23022657359204923 1.0 ['ENSG00000170899|ENST00000370963|GSTA4', 'nc|ENSG00000170899|O15217-2|GSTA4'] 56729 4050 LEAIVCIK True NCI_RA007_Epitope_Rep5 887.51502519947 887.51392993586 22.016 2 -0.7618041195404759 0.23022657359204923 1.0 ['nc|ENSG00000156471|P48651-3|PTDSS1', 'nc|ENSG00000156471|P48651-2|PTDSS1', 'ENSG00000156471|ENST00000517309|PTDSS1'] 56635 16568 LDYVLVVP True PC9_epitope_Rep2 916.5269697821599 916.52586993586 68.966 2 -0.7618129677577364 0.23022657359204923 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 15917 11724 EDRQYQIDL True PC9_epitope_Rep5 1178.5567663402999 1178.5551149037901 50.095 3 -0.7618134348131924 0.23022657359204923 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'ENST00000496144.5_1_8:100515159-100589873:+|nuORF'] 128215 25478 VRVGALLL True PC9_epitope_Rep5 839.5592729699499 839.5587249679301 103.25 1 -0.7618787004943895 0.23023455292969328 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 106630 15580 SWRRRWQHRYW True NCI_RA007_Epitope_Rep2 1715.86579392823 1715.86468993586 65.314 2 -0.76189014124751 0.23023455292969328 1.0 ['ENST00000570069.5_1_16:1826945-1827407:+|nuORF', 'ENST00000561903.6_1_16:1826945-1828699:+|nuORF'] 20076 15456 ENGFWAVEL True PC9_epitope_Rep3 1063.4974605590298 1063.49636993586 64.604 2 -0.7619376201460691 0.2302721088435374 1.0 ['ENSG00000124557|ENST00000684113|BTN1A1'] 108856 6366 TERFRNPV True H1975_Epitope_Rep3 1017.5355774032498 1017.53448993586 29.47 2 -0.7619440772825316 0.2302721088435374 1.0 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1'] 130120 7714 VTREWYQQT True PC9_epitope_Rep3 1209.5778361380499 1209.57619490379 34.668 3 -0.7620016090143307 0.2303278567308972 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 108190 6225 TDVVPEVESP True NCI_RA007_Epitope_Rep3 1070.5131701928199 1070.5120699358602 31.491 2 -0.7620123049301274 0.2303392387092958 1.0 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4', 'CHD8-TOX4|1|fusion'] 8739 6850 AVDSGMPK True NCI_RA007_Epitope_Rep1 803.38473930591 803.38364993586 30.65 2 -0.7620152150010193 0.23034721400686148 1.0 ['nc|ENSG00000277880|A0A087X0K7|TRBV17'] 125243 19808 VLQYGFKVE True PC9_epitope_Rep2 1081.5807962601698 1081.5796899358602 81.581 2 -0.762026725841463 0.23034721400686148 1.0 ['ENSG00000156017|ENST00000376834|CARNMT1'] 56117 6891 LDLSHNKLSDP True PC9_epitope_Rep2 1237.63026563373 1237.62916993586 31.908 2 -0.7621275293436274 0.23035178257204963 1.0 ['DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-3|DNAAF1'] 100675 4819 SLQWRHRWDTP True PC9_epitope_Rep1 1480.7323797168397 1480.73074490379 23.406 3 -0.7621318866770161 0.23035178257204963 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 27399 10048 FNDGNAAVV True PC9_epitope_Rep4 905.4242956187699 905.42374496793 46.315 1 -0.7621417692593877 0.23035178257204963 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 110480 19392 TIPNQLFIN True PC9_epitope_Rep2 1058.5760452329 1058.57494993586 79.969 2 -0.7621692195423563 0.2303631631868457 1.0 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000584444.5_1_17:18156710-18162004:-|nuORF', 'ENST00000478416.1_1_17:18157237-18162004:-|nuORF'] 61067 4696 LLAVSHVG True NCI_RA007_Epitope_Rep3 794.46503823194 794.46394993586 25.416 2 -0.7622801255410895 0.230404116577208 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 69552 18981 LVTGGYDYDV True PC9_epitope_Rep3 1100.50260550912 1100.5015099358602 78.234 2 -0.7622915694520336 0.23040868228057723 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 44065 16525 ILLLFWIIFY True NCI_RA007_Epitope_Rep1 1339.79441785487 1339.7933299358601 68.393 2 -0.7622928579123325 0.23040868228057723 1.0 ['ENST00000374024.3_1_1:27721873-27722296:+|nuORF'] 109378 9676 TGLITTTKL True PC9_epitope_Rep4 946.5698972233 946.56880993586 44.847 2 -0.7623109298609249 0.23040868228057723 1.0 ['ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.T3539Sfs*28|1|0.35|ENSG00000086570|chr5:151521979-151521980|-/ATGAA|frameshift_variant', 'FAT2|p.P578Afs*16|1|0.43|ENSG00000086570|chr5:151567200-151567201|-/C|frameshift_variant', 'FAT2|p.A817Qfs*33|1|0.4|ENSG00000086570|chr5:151566483-151566484|-/GTTG|frameshift_variant'] 80380 18921 PLGTQLSV True PC9_epitope_Rep2 813.45961849833 813.45852993586 78.144 2 -0.7623186855686722 0.2304200612127216 1.0 ['ENST00000535871.1_1_12:6958551-6959649:-|nuORF', 'ENST00000544610.1_1_12:6958209-6958939:-|nuORF', 'ENST00000536241.1_1_12:6958687-6959760:-|nuORF', 'ENST00000545368.5_1_12:6958360-6960430:-|nuORF', 'ENSG00000111665|ENST00000538862|CDCA3', 'CDCA3|p.E133Q|1|0.11|ENSG00000111665|chr12:6849712-6849712|C/G|missense_variant'] 117312 7687 VAAGKALE True NCI_RA007_Epitope_Rep5 757.43340375049 757.43230993586 36.271 2 -0.7623515227310653 0.23044622527131325 1.0 ['ENST00000454928.5_2_2:110705383-110742349:+|nuORF', 'ENST00000606848.1_1_2:111144305-111145031:-|nuORF', 'ENST00000488671.1_1_2:111144305-111181647:-|nuORF'] 25955 15032 FGSPEWDDYS True H1975_Epitope_Rep3 1201.45638359269 1201.45528993586 63.213 2 -0.7624387230860168 0.2304917354150034 1.0 ['ENSG00000164776|ENST00000297373|PHKG1', 'nc|ENSG00000164776|Q16816-2|PHKG1'] 10137 6855 CAWPANRPQQR True H1975_Epitope_Rep1 1325.64112218429 1325.63947490379 31.413 3 -0.7624420716719996 0.2304917354150034 1.0 ['nc|ENSG00000105711|Q07699-2|SCN1B'] 82525 21089 PVFKPFEKP True PC9_epitope_Rep2 1087.6066170851898 1087.6055299358602 86.576 2 -0.762458582680404 0.2304917354150034 1.0 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET'] 69398 8850 LVQPHKAP True PC9_epitope_Rep6 888.5181364339599 888.51702993586 43.974 2 -0.7624647690706694 0.2304917354150034 1.0 ['ENST00000421887.2_1_5:174948933-174952897:+|nuORF'] 89239 15028 REKEEARRMRR True PC9_epitope_Rep1 1515.8164607773097 1515.81481490379 62.625 3 -0.7624995183836643 0.23049629662482812 1.0 ['ENST00000546626.1_1_12:50035771-50036335:+|nuORF', 'PRPF40B|p.K785Efs*3|1|0.23|ENSG00000110844|chr12:49643718-49643719|-/A|frameshift_variant', 'nc|ENSG00000110844|Q6NWY9-2|PRPF40B', 'nc|ENSG00000110844|Q6NWY9-3|PRPF40B', 'nc|ENSG00000110844|Q6NWY9|PRPF40B', 'ENSG00000110844|ENST00000548825|PRPF40B'] 84082 6706 QEQEVERHRR True H1975_Epitope_Rep1 1365.6861578004098 1365.6850699358602 30.84 2 -0.762516477483792 0.23049629662482812 1.0 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000461159.6_1_7:18330122-18868840:+|nuORF', 'nc|ENSG00000048052|Q9UKV0-11|HDAC9', 'nc|ENSG00000048052|Q9UKV0-9|HDAC9', 'HDAC9|p.L539Sfs*14|1|0.4|ENSG00000048052|chr7:18666366-18666373|ACACTGGG/-|frameshift_variant', 'nc|ENSG00000048052|Q9UKV0-10|HDAC9', 'nc|ENSG00000048052|Q9UKV0-8|HDAC9', 'nc|ENSG00000048052|Q9UKV0-3|HDAC9'] 66225 8146 LSPSMGHPLEV True NCI_RA007_Epitope_Rep4 1165.5801446371702 1165.5790499358602 38.123 2 -0.7625184598137963 0.23049629662482812 1.0 ['nc|ENSG00000175221|Q9Y2X0-3|MED16', 'nc|ENSG00000175221|Q9Y2X0-2|MED16', 'ENSG00000175221|ENST00000325464|MED16', 'nc|ENSG00000175221|Q9Y2X0-5|MED16', 'nc|ENSG00000175221|Q9Y2X0-4|MED16'] 33695 9801 GLPTSIAH True PC9_epitope_Rep5 794.42865272322 794.42754993586 42.668 2 -0.7626002594833298 0.23058955709301637 1.0 ['ENST00000526600.1_1_11:12963940-12964069:+|nuORF'] 83302 14462 QAIQLQTL True PC9_epitope_Rep2 913.5232813840499 913.52218993586 60.899 2 -0.762623343684599 0.23058955709301637 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'RREB1|p.A584Gfs*8|1|0.14|ENSG00000124782|chr6:7229846-7229847|-/G|frameshift_variant'] 56330 7674 LDREVQYLLNK True NCI_RA007_Epitope_Rep1 1389.7616141564497 1389.75997490379 33.842 3 -0.7626287188406522 0.23058955709301637 1.0 ['HYOU1|p.E939Gfs*11|1|0.39|ENSG00000149428|chr11:119046582-119046583|-/C|frameshift_variant', 'HYOU1|p.L930Sfs*31|1|0.14|ENSG00000149428|chr11:119046610-119046610|G/-|frameshift_variant', 'ENSG00000149428|ENST00000617285|HYOU1'] 107692 11465 TALEQLFEEHK True H1975_Epitope_Rep3 1343.6721304457099 1343.6710299358601 49.222 2 -0.7626908204148036 0.23060548722800378 1.0 ['ENSG00000106384|ENST00000223114|MOGAT3'] 102075 5220 SPPRRARHGS True NCI_RA007_Epitope_Rep2 1119.6009716244698 1119.5998699358602 24.925 2 -0.7627614075360036 0.23060548722800378 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 88435 11923 QYSVVVEEVP True PC9_epitope_Rep1 1147.57610480255 1147.5744449037902 50.727 3 -0.762819590552097 0.23060548722800378 1.0 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-3|ASCC2'] 8778 14115 AVEPESEFVIK True H1975_Epitope_Rep1 1246.6445187155398 1246.64397496793 59.463 1 -0.7628601765032592 0.23060548722800378 1.0 ['ENSG00000071991|ENST00000262150|CDH19', 'nc|ENSG00000071991|Q9H159-2|CDH19', 'CDH19|p.V138Sfs*6|2|0.43|ENSG00000071991|chr18:66568494-66568495|-/T|frameshift_variant'] 112563 21671 TPAIARGRLG True PC9_epitope_Rep3 1010.5985120129799 1010.59740993586 88.655 2 -0.7628878423531702 0.23065894108256718 1.0 ['ENST00000369295.3_1_10:115805063-115805390:+|nuORF'] 68890 19043 LVENIPEVLN True PC9_epitope_Rep6 1138.6233893481399 1138.6222899358602 85.893 2 -0.762894513296629 0.23065894108256718 1.0 ['PLD5|p.G119V|2|0.2|ENSG00000180287|chr1:242288501-242288501|C/A|missense_variant'] 71777 17116 MNIIWTLP True NCI_RA007_Epitope_Rep5 986.5259242363401 986.52482993586 72.609 2 -0.7629074885272322 0.23065894108256718 1.0 ['nc|ENSG00000147535|Q8NEB5-4|PLPP5', 'ENST00000531483.1_1_8:38124719-38125149:-|nuORF', 'ENST00000527793.1_1_8:38124719-38126401:-|nuORF'] 33304 6892 GLAWGAPRSSK True NCI_RA007_Epitope_Rep2 1128.60399131624 1128.60288993586 31.426 2 -0.7629194602232122 0.23065894108256718 1.0 ['nc|ENSG00000050426|Q6P1Q0-3|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-6|LETMD1', 'ENST00000548390.5_1_12:51442139-51443111:+|nuORF', 'ENST00000550715.5_1_12:51442139-51450383:+|nuORF', 'ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1'] 121272 4793 VGGWKHYSRWT True H1975_Epitope_Rep3 1375.6785532388299 1375.67689490379 23.564 3 -0.7629268016333123 0.23065894108256718 1.0 ['ENST00000003912.7_2_1:24795783-24795897:+|nuORF'] 23079 21064 EVLHMPSVP True PC9_epitope_Rep5 1007.51100244819 1007.50990993586 86.083 2 -0.762933487982953 0.23065894108256718 1.0 ['TRIM41|p.E163Afs*155|1|0.09|ENSG00000146063|chr5:181224486-181224511|GAGGATCTAGACCCCGTCACCCCACT/-|frameshift_variant'] 117491 7580 VAELPSRRC True PC9_epitope_Rep5 1029.53894853153 1029.53784993586 34.104 2 -0.7631254439305292 0.23072943610967409 1.0 ['nc|ENSG00000109466|O95198-3|KLHL2', 'ENSG00000109466|ENST00000226725|KLHL2', 'nc|ENSG00000109466|O95198-2|KLHL2'] 24877 508 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 2.706 2 -0.7633131369822859 0.23079651772913373 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 12436 7086 DKKKPSPPAP True NCI_RA007_Epitope_Rep3 1063.6025943339098 1063.6014899358602 34.989 2 -0.7633201153610739 0.23079651772913373 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 26523 19103 FIVAWVIGMV True PC9_epitope_Rep4 1133.6307236580499 1133.62962993586 81.571 2 -0.7633576463028665 0.2308044753839105 1.0 ['nc|ENSG00000124564|O00476|SLC17A3', 'ENSG00000124564|ENST00000397060|SLC17A3'] 95413 23407 SAKKKMKSKKK True NCI_RA007_Epitope_Rep4 1290.8169612879399 1290.81586993586 101.6 2 -0.7633600864562872 0.2308044753839105 1.0 ['ENST00000565844.1_1_16:19721758-19726357:-|nuORF', 'ENSG00000103550|ENST00000219837|KNOP1'] 37434 12839 GWPGAGPL True PC9_epitope_Rep2 753.38097425481 753.37986993586 54.686 2 -0.7634769622348179 0.2308158439255099 1.0 ['ENSG00000181585|ENST00000643606|TMIE'] 81023 4092 PNVHQHNPDCD True H1975_Epitope_Rep2 1274.50983323122 1274.5087299358602 20.829 2 -0.7634841812501894 0.23082038928217785 1.0 ['nc|ENSG00000156299|Q13009-2|TIAM1', 'ENSG00000156299|ENST00000541036|TIAM1'] 56078 6746 LDLFMHRK True NCI_RA007_Epitope_Rep5 1058.5695203838202 1058.5684299358602 32.622 2 -0.7634925094023283 0.23082038928217785 1.0 ['ENSG00000162434|ENST00000342505|JAK1'] 39405 20941 HLWHPRRHYLL True PC9_epitope_Rep3 1526.8371195688999 1526.83602993586 85.828 2 -0.7635177698261765 0.23082038928217785 1.0 ['ENST00000448759.1_1_1:43352960-43353698:-|nuORF'] 111956 12883 TLSDTLWGP True H1975_Epitope_Rep1 988.48656152216 988.48546993586 54.625 2 -0.7636249135844647 0.23082493423580527 1.0 ['ENSG00000107159|ENST00000378357|CA9'] 129464 8389 VTENPDRVKLK True H1975_Epitope_Rep1 1297.73539940861 1297.7343099358602 37.196 2 -0.7636447703073199 0.23082493423580527 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant'] 36170 10285 GVFHRARG True NCI_RA007_Epitope_Rep4 898.4885676411799 898.4880149679301 46.417 1 -0.7636636300362262 0.23082493423580527 1.0 ['ENSG00000103381|ENST00000381774|CPPED1', 'ENST00000539677.1_1_16:12874994-12897657:-|nuORF', 'nc|ENSG00000103381|Q9BRF8-3|CPPED1', 'nc|ENSG00000103381|Q9BRF8-2|CPPED1'] 49288 4919 KHLKKLLLV True PC9_epitope_Rep4 1090.75903540566 1090.7579299358601 25.517 2 -0.7637190706490391 0.2308442566019891 1.0 ['ENSG00000118322|ENST00000327245|ATP10B'] 44801 9691 IPVDEIDWP True NCI_RA007_Epitope_Rep4 1082.52842633414 1082.52732993586 44.126 2 -0.7637904643935978 0.2308442566019891 1.0 ['CABIN1|p.R1594W|1|0.03|ENSG00000099991|chr22:24164433-24164433|C/T|missense_variant'] 40699 20935 HTPRRWSW True PC9_epitope_Rep1 1124.5627952106 1124.5616899358602 85.348 2 -0.7638064220143602 0.2308442566019891 1.0 ['nc|ENSG00000211699|P03979|TRGV3', 'nc|ENSG00000211697|A0A0B4J1U4|TRGV5'] 24945 19152 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 79.362 2 -0.763864345156594 0.2308522114347357 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 109421 16754 TGRARLGV True PC9_epitope_Rep4 828.4929843152798 828.49188993586 72.411 2 -0.7638788684990118 0.2308522114347357 1.0 ['ENST00000409806.7_2_6:149772227-149772305:-|nuORF'] 38410 11635 HGNPFSLP True PC9_epitope_Rep6 867.42390169595 867.42280993586 55.875 2 -0.7639161844996498 0.23087835441541554 1.0 ['ENST00000482866.5_1_7:76940677-76940857:-|nuORF'] 112716 12735 TPHPFPAV True PC9_epitope_Rep1 864.4493881678 864.44828993586 53.86 2 -0.7639724456767508 0.23091586133522476 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4'] 64950 8321 LSCLLGPMEG True H1975_Epitope_Rep2 1018.48273909502 1018.48164993586 36.959 2 -0.7640079784771796 0.23091586133522476 1.0 ['ENST00000478328.1_1_7:127231492-127231768:+|nuORF'] 58781 5547 LFNPYYDP True NCI_RA007_Epitope_Rep2 1027.46509780159 1027.46400993586 26.194 2 -0.7640813433818625 0.23098291861221112 1.0 ['ENSG00000089199|ENST00000378961|CHGB'] 82230 15064 PTIISAPAAP True PC9_epitope_Rep6 936.5280324113198 936.52692993586 69.994 2 -0.7641016955290977 0.23098291861221112 1.0 ['SUGP1|p.P365S|1|0.3|ENSG00000105705|chr19:19297139-19297139|G/A|missense_variant'] 24105 13661 EYSIPDKQYTY True H1975_Epitope_Rep2 1405.64016161109 1405.63906993586 57.686 2 -0.7641407341891334 0.23100905773010033 1.0 ['UTP4|p.D562Y|1|0.15|ENSG00000141076|chr16:69165377-69165377|G/T|missense_variant'] 98873 6515 SIVPPSNGT True NCI_RA007_Epitope_Rep3 870.4446967101801 870.44358993586 32.667 2 -0.7641765423039997 0.23101700675246384 1.0 ['ENSG00000168917|ENST00000446465|SLC35G2'] 63080 10356 LNLSDLLAV True PC9_epitope_Rep3 956.5542471591599 956.55314993586 44.777 2 -0.7642278273853707 0.23101700675246384 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 100886 2613 SLSHTFHRAL True NCI_RA007_Epitope_Rep5 1167.61489035311 1167.61324490379 14.745 3 -0.7642471747695391 0.23103973050043586 1.0 ['nc|ENSG00000153303|Q8N878-2|FRMD1', 'ENSG00000153303|ENST00000283309|FRMD1'] 63419 23788 LPGLFLLQQL True PC9_epitope_Rep3 1140.69068106232 1140.6890249037901 96.784 3 -0.7642630497186162 0.23103973050043586 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'ENST00000580882.5_1_17:26966325-26972074:-|nuORF', 'ENST00000579253.1_1_17:26967576-26969063:-|nuORF', 'nc|ENSG00000007202|Q14667-4|BLTP2', 'ENST00000577417.5_1_17:26966838-26970337:-|nuORF', 'KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion'] 20451 10618 EPRLTLGL True NCI_RA007_Epitope_Rep5 897.5283667644899 897.52726993586 47.481 2 -0.7643655195143737 0.23104426452337332 1.0 ['nc|ENSG00000285253|Q6N043-4|ZNF280D'] 131722 19652 VWVWVCLRRRL True NCI_RA007_Epitope_Rep2 1484.8550781321599 1484.85343490379 81.39 3 -0.7643820453767305 0.23104426452337332 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 81890 21332 PSLINLLV True PC9_epitope_Rep2 867.5429541994699 867.54184993586 87.518 2 -0.7643953200659633 0.23104426452337332 1.0 ['nc|ENSG00000151687|Q7Z5J8-3|ANKAR', 'nc|ENSG00000151687|Q7Z5J8-2|ANKAR', 'ENSG00000151687|ENST00000684021|ANKAR'] 63137 18014 LNQMLGKNL True PC9_epitope_Rep3 1029.5641006502099 1029.56300993586 74.494 2 -0.7644938248234174 0.23107039964541626 1.0 ['ENST00000427841.5_1_3:195698252-195701270:-|nuORF'] 28551 12670 FSLATEPGL True NCI_RA007_Epitope_Rep3 933.4807478657299 933.47964993586 57.08 2 -0.7644999855345319 0.2310783459157593 1.0 ['ENST00000267102.12_1_12:49495282-49496146:-|nuORF'] 16336 5199 EEKILRMLFT True H1975_Epitope_Rep3 1278.7005941230198 1278.69895490379 25.088 3 -0.764529280782359 0.2310783459157593 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 136838 636 YIVGWRTGLCE True H1975_Epitope_Rep3 1295.63324283919 1295.63158490379 3.4852 3 -0.7645405721517501 0.2311044793759603 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 44565 21340 IPEELYEML True PC9_epitope_Rep2 1135.54711317339 1135.5460099358602 87.551 2 -0.7645677268382085 0.23111583861484142 1.0 ['nc|ENSG00000100311|P01127-2|PDGFB', 'ENSG00000100311|ENST00000331163|PDGFB'] 25052 19869 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 89.085 2 -0.7646045056524043 0.2311419707490028 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 58480 9537 LEYLPPWDP True H1975_Epitope_Rep3 1128.54916177872 1128.5480699358602 41.692 2 -0.7646350592617607 0.23115332909840303 1.0 ['DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant', 'ENST00000607094.1_1_6:116600797-116720830:+|nuORF', 'ENST00000436315.2_1_9:71224173-71224329:+|nuORF', 'ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 37720 5546 HASDDFFRKLR True NCI_RA007_Epitope_Rep2 1390.7105816430999 1390.7094899358601 26.189 2 -0.7646729601514005 0.231176044790451 1.0 ['ENST00000566590.5_1_16:8807641-8875284:+|nuORF', 'ENSG00000183044|ENST00000268251|ABAT'] 136114 14510 YGETWHKGGIL True PC9_epitope_Rep1 1259.6298717109098 1259.6287699358602 60.637 2 -0.7646740897570732 0.231176044790451 1.0 ['ENSG00000085377|ENST00000652536|PREP'] 101252 6192 SLWKEVSEL True PC9_epitope_Rep5 1089.57062549929 1089.5695299358601 28.801 2 -0.7648006262309511 0.23119303998463833 1.0 ['nc|ENSG00000025156|Q03933-2|HSF2', 'ENSG00000025156|ENST00000368455|HSF2'] 16820 12857 EFNRQVSFL True NCI_RA007_Epitope_Rep4 1138.5771078620598 1138.5760099358602 56.537 2 -0.7648042365660792 0.23119303998463833 1.0 ['ENST00000507415.1_1_5:138699473-138699677:+|nuORF'] 63201 13743 LNVNRREILIN True NCI_RA007_Epitope_Rep1 1352.7888319637998 1352.7877299358602 57.473 2 -0.7648349861033991 0.23119303998463833 1.0 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 33967 11287 GNFAGAKL True PC9_epitope_Rep2 776.41808803952 776.41698993586 48.739 2 -0.7648372913020035 0.23119303998463833 1.0 ['ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant'] 45316 12905 ISCCAKNR True PC9_epitope_Rep5 893.42114189797 893.42004993586 54.651 2 -0.76486676493156 0.23119303998463833 1.0 ['ENSG00000137251|ENST00000259782|TINAG'] 66852 10590 LSWCTRRRCP True NCI_RA007_Epitope_Rep2 1276.6281149724398 1276.62700993586 45.792 2 -0.7648756440364687 0.23119303998463833 1.0 ['chr17:75737444-75740358|128|14.67|0.04|8.44|+|0|ITGB4,ITGB4|1'] 108866 8271 TERLERTGP True H1975_Epitope_Rep3 1057.55162139021 1057.5505299358601 36.796 2 -0.7648926663608007 0.23119303998463833 1.0 ['ENSG00000232258|ENST00000620492|TMEM114'] 99447 12507 SLEKEKTL True PC9_epitope_Rep6 946.53351171458 946.53240993586 59.535 2 -0.764910989755007 0.23119303998463833 1.0 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 127646 17310 VRELRGLG True NCI_RA007_Epitope_Rep1 898.5348491272598 898.53374993586 71.465 2 -0.7649370882620758 0.23119415109666938 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 50486 1400 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 7.2889 3 -0.7649524969683981 0.23119415109666938 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 135539 7258 YEEFWIKYAKY True H1975_Epitope_Rep1 1538.74456710998 1538.7429149037903 32.927 3 -0.7649587933262151 0.23119415109666938 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 125513 6543 VLVQQQSKEL True NCI_RA007_Epitope_Rep4 1170.6608374860198 1170.65920490379 31.781 3 -0.7649595448424255 0.23119415109666938 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1'] 107586 13398 TAFDLWEQAE True H1975_Epitope_Rep1 1208.5349682665599 1208.5338699358601 56.647 2 -0.7650200558973933 0.2312020913642607 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1'] 92649 20733 RRFPCFKKALI True NCI_RA007_Epitope_Rep2 1377.8067309574099 1377.80509490379 85.736 3 -0.7650316531546371 0.2312020913642607 1.0 ['nc|ENSG00000170703|Q8N841-4|TTLL6'] 124450 10738 VLESKKTLL True PC9_epitope_Rep6 1029.6433965167298 1029.6422899358602 52.125 2 -0.7651873532158288 0.23121344597388788 1.0 ['nc|ENSG00000103248|Q2M296-4|MTHFSD', 'nc|ENSG00000103248|Q2M296-3|MTHFSD', 'ENST00000546093.5_1_16:86580251-86588800:-|nuORF'] 140936 20193 YYYRRRHRHER True H1975_Epitope_Rep1 1690.8665222042198 1690.8654299358602 84.02 2 -0.7652320343957473 0.23122480024812064 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 122739 21906 VGVDEEIVYAK True NCI_RA007_Epitope_Rep1 1220.6288686513997 1220.6277699358602 89.697 2 -0.7653051717606447 0.23122590935270923 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.T612Dfs*15|1|0.34|ENSG00000092201|chr14:21361174-21361175|-/T|frameshift_variant', 'ENST00000556217.5_1_14:21837875-21852161:-|nuORF'] 78829 4877 PEPTISWKK True H1975_Epitope_Rep3 1084.59169529704 1084.5905899358602 23.885 2 -0.765348944142956 0.23122590935270923 1.0 ['ROBO1|p.G1375Afs*42|1|0.21|ENSG00000169855|chr3:78617793-78617793|C/-|frameshift_variant', 'nc|ENSG00000169855|Q9Y6N7-6|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-5|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-4|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-3|ROBO1', 'ENSG00000169855|ENST00000464233|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-2|ROBO1', 'ROBO1|p.G196S|1|0.12|ENSG00000169855|chr3:78746814-78746814|C/T|missense_variant'] 124213 19479 VLAPSRQALPR True NCI_RA007_Epitope_Rep5 1206.71968977482 1206.7180349037899 81.812 3 -0.7653726701855637 0.23122590935270923 1.0 ['ENST00000263851.8_2_8:79717625-79717664:-|nuORF'] 55827 11887 LDEQKKKKPNP True H1975_Epitope_Rep1 1323.7510494727499 1323.74994993586 50.724 2 -0.7653878722911304 0.23122590935270923 1.0 ['nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 111750 9475 TLQIQSLI True NCI_RA007_Epitope_Rep5 914.54368247546 914.54258993586 43.079 2 -0.7654148333234979 0.23124861552093331 1.0 ['ENST00000484256.1_1_22:29191536-29192243:-|nuORF', 'nc|ENSG00000100219|P17861|XBP1'] 30680 3764 GALLEQPV True H1975_Epitope_Rep1 825.4596184983299 825.45852993586 19.031 2 -0.765447852297989 0.23124861552093331 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 17868 13555 EICQKSLTGY True NCI_RA007_Epitope_Rep5 1140.54851015572 1140.54685490379 58.828 3 -0.7654523029826644 0.23125655300736891 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant'] 15825 15042 EDKKVRVQ True NCI_RA007_Epitope_Rep3 1000.5665431783598 1000.56544993586 66.627 2 -0.7654853227457933 0.23125655300736891 1.0 ['CDK14|p.F103Lfs*39|1|0.23|ENSG00000058091|chr7:90726750-90726750|T/-|frameshift_variant', 'nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14'] 115169 6045 TVAGYGRYSGK True NCI_RA007_Epitope_Rep5 1157.5829215184897 1157.58127490379 29.933 3 -0.765513171295079 0.23125766010543258 1.0 ['ENSG00000133216|ENST00000374630|EPHB2', 'nc|ENSG00000133216|P29323-3|EPHB2', 'nc|ENSG00000133216|P29323|EPHB2'] 110231 13806 TIENFHVV True PC9_epitope_Rep4 957.49198125577 957.49088993586 61.0 2 -0.765530281955936 0.23125766010543258 1.0 ['nc|ENSG00000113163|Q9Y5P4-2|CERT1', 'ENSG00000113163|ENST00000643780|CERT1', 'nc|ENSG00000113163|Q9Y5P4-3|CERT1'] 122095 18344 VGREGRLP True NCI_RA007_Epitope_Rep4 882.5035489989798 882.5030049679301 79.362 1 -0.7655475867306769 0.23125766010543258 1.0 ['ENST00000243440.1_1_1:212870399-212873318:-|nuORF'] 5306 20010 ALSFSEHFI True PC9_epitope_Rep6 1049.51819600361 1049.5170899358602 89.634 2 -0.7655489915111625 0.23125766010543258 1.0 ['ENST00000289228.6_1_2:98272641-98272800:-|nuORF'] 73033 5847 NDETVCDRQE True NCI_RA007_Epitope_Rep2 1207.47753004343 1207.47642993586 27.361 2 -0.7655861404297122 0.23126559662153182 1.0 ['nc|ENSG00000100678|P57103-3|SLC8A3'] 62342 15618 LLRKFCQMRK True PC9_epitope_Rep4 1321.74750182913 1321.74586490379 67.997 3 -0.7655885585338909 0.23126559662153182 1.0 ['nc|ENSG00000050628|P43115-4|PTGER3', 'nc|ENSG00000050628|P43115-5|PTGER3', 'nc|ENSG00000050628|P43115-6|PTGER3', 'nc|ENSG00000050628|P43115-12|PTGER3'] 30607 11648 GALAKAIY True H1975_Epitope_Rep2 805.4697892592098 805.46868993586 49.873 2 -0.7656137700842861 0.23128829826504246 1.0 ['ENSG00000264424|ENST00000255381|MYH4', 'MYH4|p.K643Rfs*17|1|0.4|ENSG00000264424|chr17:10456525-10456525|T/-|frameshift_variant'] 117386 12018 VADASKSVQV True PC9_epitope_Rep1 1002.53457434374 1002.53346993586 51.089 2 -0.7656225444487338 0.23128829826504246 1.0 ['ENSG00000241685|ENST00000262942|ARPC1A', 'ENST00000471960.5_2_7:98951595-98957666:+|nuORF', 'nc|ENSG00000241685|Q92747-2|ARPC1A'] 70261 10789 LYNKFSDYYSK True NCI_RA007_Epitope_Rep2 1426.67688147298 1426.6757899358602 46.568 2 -0.7656444671846181 0.23129281833215215 1.0 ['ENSG00000168263|ENST00000382082|KCNV2'] 35790 5744 GTWGTGGK True PC9_epitope_Rep1 762.3660524666599 762.36494993586 26.912 2 -0.7657044599943341 0.23129281833215215 1.0 ['ENST00000590478.1_1_17:33569582-33569933:-|nuORF'] 111804 10709 TLRERLRHWQS True PC9_epitope_Rep6 1480.801127983 1480.79947490379 52.002 3 -0.7657370483450038 0.23129281833215215 1.0 ['ENST00000392088.6_1_2:220119039-220119258:-|nuORF'] 57376 14098 LEHLDLSHNAI True PC9_epitope_Rep2 1260.64625005104 1260.64459490379 59.502 3 -0.7657708973680136 0.23133369752986166 1.0 ['LRIG3|p.D419H|1|0.09|ENSG00000139263|chr12:58883581-58883581|C/G|missense_variant'] 2128 5319 AELRVPSP True H1975_Epitope_Rep2 867.48141657207 867.48030993586 25.512 2 -0.765808659424333 0.23134163086326792 1.0 ['ENSG00000182544|ENST00000329548|MFSD5', 'nc|ENSG00000182544|Q6N075-2|MFSD5'] 42936 12863 IFYTQSSL True PC9_epitope_Rep5 957.4807478657299 957.47964993586 54.486 2 -0.765837078765245 0.23134163086326792 1.0 ['nc|ENSG00000176198|Q8NGC9|OR11H4', 'ENSG00000176198|ENST00000641082|OR11H4'] 123007 11498 VGWWGPAP True H1975_Epitope_Rep2 868.4231734199598 868.42206993586 49.284 2 -0.765855995495944 0.2313427327083487 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.A1065Pfs*28|1|0.5|ENSG00000105429|chr19:42352298-42352298|T/-|frameshift_variant'] 41719 13152 IDNFSHNQSND True PC9_epitope_Rep6 1289.52725711717 1289.52562490379 62.231 3 -0.765867318832631 0.2313427327083487 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant'] 29080 19825 FTQDSNYLL True PC9_epitope_Rep2 1099.51858992643 1099.51807496793 81.646 1 -0.7658689335502421 0.2313427327083487 1.0 ['nc|ENSG00000023734|Q9Y3F4-2|STRAP', 'ENSG00000023734|ENST00000419869|STRAP'] 33523 11711 GLHSKVIL True PC9_epitope_Rep4 865.53853752537 865.53744993586 52.809 2 -0.7658851262789338 0.2313427327083487 1.0 ['ENST00000494820.5_1_22:20100432-20103278:-|nuORF', 'nc|ENSG00000099899|Q8IZ69-2|TRMT2A', 'ENSG00000099899|ENST00000252136|TRMT2A', 'ENST00000487668.5_1_22:20100432-20101310:-|nuORF', 'ENST00000487378.1_1_22:20100088-20100785:-|nuORF'] 120788 8060 VGCVCWARP True PC9_epitope_Rep3 989.4575274066898 989.45642993586 35.98 2 -0.7658889895362379 0.23135408054800993 1.0 ['ENST00000605589.1_1_1:184355274-184355667:-|nuORF'] 42914 15933 IFVTNVRSL True PC9_epitope_Rep1 1047.60767971435 1047.60658993586 66.096 2 -0.7659231382925098 0.23136542805261526 1.0 ['ENSG00000082497|ENST00000367012|SERTAD4'] 69280 10385 LVPELQAT True PC9_epitope_Rep1 869.4858332461699 869.48472993586 44.829 2 -0.7659820891921028 0.23138129050353554 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 68466 14322 LTVEAPYSYN True H1975_Epitope_Rep3 1155.54480467427 1155.54370993586 60.436 2 -0.7659920631566771 0.23138129050353554 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant'] 106648 18658 SYADAFQFL True NCI_RA007_Epitope_Rep4 1060.4865615221602 1060.48597496793 80.711 1 -0.7660228225458278 0.23138129050353554 1.0 ['ENSG00000242732|ENST00000609883|RTL5'] 128210 24889 VRVGALLL True NCI_RA007_Epitope_Rep5 839.5592729699499 839.5587249679301 103.23 1 -0.766076632215443 0.23138129050353554 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 82460 14273 PVDNLVIK True PC9_epitope_Rep6 896.53311779176 896.53256496793 66.791 1 -0.7661548837875843 0.23140739865962032 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 46689 7221 ITWGGQNI True PC9_epitope_Rep5 887.4501164437899 887.44900993586 32.74 2 -0.7661663807359272 0.23141874437211224 1.0 ['nc|ENSG00000196924|P21333-2|FLNA', 'ENSG00000196924|ENST00000369850|FLNA', 'FLNA|p.W749Lfs*73|2|0.44|ENSG00000196924|chrX:154364056-154364057|-/A|frameshift_variant'] 69104 7951 LVKNDARRTRS True H1975_Epitope_Rep3 1314.7480297809798 1314.7469299358602 35.553 2 -0.7663192690908937 0.23144143479223558 1.0 ['ENSG00000164619|ENST00000649409|BMPER'] 128208 24023 VRVGALLL True NCI_RA007_Epitope_Rep3 839.5592729699499 839.5587249679301 104.05 1 -0.7663356241384458 0.23144143479223558 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 81991 17558 PSSLLLPLCL True H1975_Epitope_Rep1 1054.6096538603 1054.60907496793 73.046 1 -0.7663422992465055 0.23145277949989668 1.0 ['ENST00000392547.6_1_2:175427117-175427267:-|nuORF'] 12371 6492 DIYSMHIFLTE True NCI_RA007_Epitope_Rep1 1367.64313881655 1367.6414849037901 29.271 3 -0.7664077483345371 0.23149022849383008 1.0 ['nc|ENSG00000227345|Q86W56-4|PARG', 'nc|ENSG00000227345|Q86W56-3|PARG', 'nc|ENSG00000227345|Q86W56-2|PARG', 'ENSG00000227345|ENST00000616448|PARG', 'nc|ENSG00000227345|Q86W56-5|PARG'] 24908 19145 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 78.614 2 -0.7664262440984979 0.23149022849383008 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 94296 16515 RWSRRTLYVQ True PC9_epitope_Rep4 1363.74730150499 1363.7462099358602 71.497 2 -0.7664886765581818 0.23154585307532213 1.0 ['ENST00000260662.2_1_2:25016783-25022552:+|nuORF'] 39654 18465 HPRVHRLFL True PC9_epitope_Rep6 1173.6883300768898 1173.6866849037901 83.666 3 -0.7665103848305007 0.23155719557195573 1.0 ['ENST00000369838.5_1_6:80341105-80383359:+|nuORF'] 121347 8317 VGHRRKERP True NCI_RA007_Epitope_Rep3 1133.6530071973298 1133.65135490379 39.833 3 -0.7665129451735189 0.23156170206485321 1.0 ['ENST00000493001.1_1_2:224759053-224760271:-|nuORF'] 70718 15528 MDVFGVCLTI True PC9_epitope_Rep4 1096.5296892874399 1096.52858993586 67.652 2 -0.7665221695788147 0.23156170206485321 1.0 ['ENST00000558523.1_1_14:102821996-102829188:-|nuORF'] 55697 11261 LDDAVNPLHEN True PC9_epitope_Rep1 1235.57823006087 1235.57712993586 48.194 2 -0.7665584000861367 0.23156170206485321 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 122376 17229 VGSFDEVP True PC9_epitope_Rep3 848.39159850816 848.39050993586 71.423 2 -0.7665959306892906 0.23157304365793902 1.0 ['ENSG00000114771|ENST00000232892|AADAC', 'AADAC|p.S75L|1|0.19|ENSG00000114771|chr3:151817451-151817451|C/T|missense_variant'] 134130 10109 WRDSGSALTGP True PC9_epitope_Rep1 1145.5465360097699 1145.54488490379 43.756 3 -0.7666743613128251 0.23157754918311024 1.0 ['ENST00000286800.7_1_21:30693611-30693791:+|nuORF'] 134059 18102 WQKLIVWKFPP True NCI_RA007_Epitope_Rep5 1440.8281775946396 1440.8270899358602 76.431 2 -0.7666911333110747 0.23157754918311024 1.0 ['ENSG00000086827|ENST00000200135|ZW10', 'nc|ENSG00000086827|O43264-2|ZW10'] 116403 21597 TWICAICKNV True PC9_epitope_Rep1 1149.56747177849 1149.5663699358602 87.896 2 -0.766722616762498 0.23157754918311024 1.0 ['ENST00000367066.7_1_6:159456639-159456687:-|nuORF'] 100704 8705 SLREMEEGP True PC9_epitope_Rep1 1046.47025983502 1046.46916993586 38.323 2 -0.7667341886018434 0.23158888987278256 1.0 ['ENSG00000144644|ENST00000282538|GADL1'] 104537 3139 SSSDSSSDSD True PC9_epitope_Rep5 972.31559258508 972.31504496793 17.081 1 -0.7668445686943653 0.23166718318796947 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4', 'ENSG00000130382|ENST00000252674|MLLT1'] 55201 6001 LAPLCWPPT True NCI_RA007_Epitope_Rep5 996.5102741722 996.50916993586 29.766 2 -0.7668462219667973 0.23166718318796947 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4', 'nc|ENSG00000184716|A6NH21-2|SERINC4', 'ENST00000448553.5_1_15:44087200-44089477:-|nuORF'] 65593 10631 LSGKTWKAI True H1975_Epitope_Rep2 1002.5862159937799 1002.58510993586 45.915 2 -0.766858495028745 0.23166718318796947 1.0 ['ENSG00000205356|ENST00000447648|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-2|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-4|TECPR1', 'nc|ENSG00000205356|Q7Z6L1-3|TECPR1'] 66489 13747 LSRWHELRRFW True H1975_Epitope_Rep3 1584.8425988721597 1584.8415099358601 58.175 2 -0.7669017703768812 0.23168986024821805 1.0 ['ENST00000549078.5_1_12:53344429-53346127:+|nuORF'] 105829 19036 SVIPTDPQV True PC9_epitope_Rep2 954.5022115863 954.50110993586 78.588 2 -0.766916680424797 0.23168986024821805 1.0 ['nc|ENSG00000032742|Q13099-3|IFT88', 'ENSG00000032742|ENST00000351808|IFT88', 'nc|ENSG00000032742|Q13099-1|IFT88'] 67878 18296 LTKKWLLEDFS True PC9_epitope_Rep4 1378.7496524904197 1378.74799490379 78.445 3 -0.7670020175498005 0.23173071247269936 1.0 ['ENSG00000170775|ENST00000303921|GPR37'] 45511 5984 ISESPSSPA True H1975_Epitope_Rep3 873.40797684829 873.4074249679301 28.029 1 -0.7670129814280071 0.23174204973068693 1.0 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-3|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 29459 9801 FVHYFAPDSL True PC9_epitope_Rep5 1194.5709598524597 1194.5693249037902 42.668 3 -0.7671206204242645 0.23180899257750823 1.0 ['CON__Q3T052'] 105705 12119 SVHKFFNLLKE True PC9_epitope_Rep5 1360.7503211967598 1360.74868490379 51.604 3 -0.7671421240120813 0.23180899257750823 1.0 ['RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'ITM2B-RB1|4|fusion', 'ITM2B-RB1|1|fusion'] 23379 8293 EVVACFRMTP True H1975_Epitope_Rep3 1151.5467363339098 1151.54562993586 36.884 2 -0.7671678485863084 0.23184641945432277 1.0 ['RYR1|p.A3631E|1|0.16|ENSG00000196218|chr19:38528373-38528373|C/A|missense_variant'] 70171 8288 LYLHHNHISNI True H1975_Epitope_Rep1 1359.70476798667 1359.70366993586 36.812 2 -0.7671698374298235 0.23184641945432277 1.0 ['LRRTM3|p.D93H|1|0.82|ENSG00000198739|chr10:66927193-66927193|G/C|missense_variant'] 64179 5588 LQHHQIIQQ True NCI_RA007_Epitope_Rep3 1143.61489035311 1143.61378993586 28.973 2 -0.7672722009537342 0.23191677733510402 1.0 ['ENSG00000136937|ENST00000375147|NCBP1'] 133629 20125 WKILWFIPFR True NCI_RA007_Epitope_Rep5 1404.8070482272399 1404.80539490379 84.355 3 -0.7673097108988933 0.2319394440181786 1.0 ['ENSG00000175893|ENST00000380916|ZDHHC21'] 81468 5493 PQMRPKPHYVM True NCI_RA007_Epitope_Rep2 1382.6951319031 1382.69347490379 25.984 3 -0.7673372677820411 0.2319394440181786 1.0 ['ENST00000443361.1_1_9:108283251-108284913:+|nuORF'] 10918 5920 DAVATYYLYMK True H1975_Epitope_Rep1 1336.63732516012 1336.63622993586 27.842 2 -0.7674241493959412 0.23199952785646838 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF'] 34540 7174 GQESSTDIKAP True PC9_epitope_Rep3 1131.54078192299 1131.53968993586 32.606 2 -0.7674342313256662 0.23199952785646838 1.0 ['C1RL|p.Q92Rfs*46|1|0.18|ENSG00000139178|chr12:7108277-7108277|G/-|frameshift_variant', 'ENSG00000139178|ENST00000266542|C1RL'] 19079 13316 ELHLCHCPA True PC9_epitope_Rep3 1021.4473566458099 1021.44624993586 56.254 2 -0.7674464796069715 0.23199952785646838 1.0 ['ENSG00000171492|ENST00000337338|LRRC8D'] 136040 19218 YFRVPREYWR True PC9_epitope_Rep1 1470.7520525322598 1470.75094993586 78.719 2 -0.7674753894602712 0.23199952785646838 1.0 ['ENSG00000149328|ENST00000535456|GLB1L2', 'nc|ENSG00000166105|Q8NCI6-4|GLB1L3', 'ENSG00000166105|ENST00000431683|GLB1L3'] 117321 11053 VAAKKAGL True PC9_epitope_Rep1 756.4857736765199 756.48466993586 47.404 2 -0.7677373906133657 0.23224007435931482 1.0 ['SH3TC1|p.G548V|1|0.31|ENSG00000125089|chr4:8227337-8227337|G/T|missense_variant'] 82922 9762 PWGWDNLK True H1975_Epitope_Rep1 1014.4923156089399 1014.49120993586 42.479 2 -0.7677624906709509 0.23224007435931482 1.0 ['ENST00000484339.1_1_1:26349695-26357853:+|nuORF'] 122078 9654 VGRARPAGW True NCI_RA007_Epitope_Rep2 968.5304324531597 968.52932993586 42.169 2 -0.7677871671016022 0.23224007435931482 1.0 ['nc|ENSG00000084112|Q8WYL5-5|SSH1', 'nc|ENSG00000084112|Q8WYL5-2|SSH1'] 116493 15966 TYDKMWAFMS True PC9_epitope_Rep5 1278.5413166003 1278.54020993586 66.402 2 -0.7678245061208747 0.2322479750962659 1.0 ['nc|ENSG00000164418|Q13002-6|GRIK2', 'nc|ENSG00000164418|Q13002-4|GRIK2', 'nc|ENSG00000164418|Q13002-2|GRIK2', 'nc|ENSG00000164418|Q13002-5|GRIK2', 'ENSG00000164418|ENST00000369134|GRIK2'] 56649 5174 LEAAGDKF True NCI_RA007_Epitope_Rep3 849.42323298961 849.42212993586 27.343 2 -0.7678378709803032 0.2322479750962659 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 73951 12463 NHLVIASV True PC9_epitope_Rep5 851.48650195251 851.48540993586 52.938 2 -0.7678491367503342 0.23225930187955504 1.0 ['nc|ENSG00000162521|Q09028-4|RBBP4', 'nc|ENSG00000162521|Q09028-3|RBBP4', 'nc|ENSG00000162521|Q09028-2|RBBP4', 'ENSG00000162521|ENST00000373493|RBBP4', 'ENST00000401893.7_1_1:33116898-33134028:+|nuORF', 'ENST00000502424.1_1_5:14797477-14798464:-|nuORF', 'ENST00000398588.2_1_6:58446590-58447106:-|nuORF', 'ENST00000525506.1_1_1:33116898-33123241:+|nuORF'] 101336 13649 SLYSGCRLTL True PC9_epitope_Rep4 1111.56957995347 1111.56848993586 60.393 2 -0.7678727394758708 0.23227062832863699 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant'] 108094 10636 TDLLLVNHK True H1975_Epitope_Rep3 1051.6025943339102 1051.6014899358602 45.985 2 -0.7679080455308194 0.2322819544435265 1.0 ['ENSG00000147050|ENST00000611820|KDM6A', 'nc|ENSG00000147050|O15550|KDM6A'] 44052 23274 ILLFRRPLPK True PC9_epitope_Rep3 1251.8179472641098 1251.81631490379 94.8 3 -0.7679340319949208 0.23228404531508143 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 81660 27915 PRSSSLWIELC True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 117.97 3 -0.7679351457885741 0.23228404531508143 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 122246 16554 VGRRAAKA True NCI_RA007_Epitope_Rep2 827.5089687325898 827.5084249679301 69.12 1 -0.7679446615819755 0.23228404531508143 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 65204 8154 LSDYSRSDASS True NCI_RA007_Epitope_Rep5 1186.5102100707 1186.5091099358601 38.047 2 -0.7679678769487608 0.23228404531508143 1.0 ['ENSG00000169926|ENST00000307145|KLF13'] 93999 25440 RVPVGGGP True H1975_Epitope_Rep3 737.41842239269 737.4178749679301 105.83 1 -0.7679773030075581 0.23228404531508143 1.0 ['ENSG00000236104|ENST00000431845|ZBTB22'] 71220 8495 MFTLQKFRLQK True NCI_RA007_Epitope_Rep4 1438.8118759074998 1438.8107699358602 39.478 2 -0.767981381990528 0.23228404531508143 1.0 ['ENST00000226725.10_1_4:166160001-166184388:+|nuORF'] 14569 4672 DVEYQNSETK True NCI_RA007_Epitope_Rep2 1211.53061116211 1211.52950993586 22.8 2 -0.7679866279367945 0.23228404531508143 1.0 ['ENSG00000179104|ENST00000321196|TMTC2', 'ENST00000551915.5_1_12:83081308-83379891:+|nuORF'] 99568 13549 SLFFNWKQEFR True H1975_Epitope_Rep1 1500.75138382592 1500.75028993586 57.24 2 -0.7679984812724142 0.23228404531508143 1.0 ['ENSG00000091106|ENST00000402280|NLRC4'] 70068 8052 LYHRRGWWHPA True PC9_epitope_Rep2 1477.7479702113299 1477.7463149037899 36.332 3 -0.7680757799814922 0.2323327679032377 1.0 ['ENST00000572418.1_1_17:3807220-3819678:-|nuORF'] 73206 15150 NEFKFLISF True PC9_epitope_Rep4 1143.59644632431 1143.5953499358602 66.201 2 -0.7680930521262942 0.2323327679032377 1.0 ['nc|ENSG00000275243|A0A087WV62|TRBV16'] 36531 12826 GVKRRRLI True NCI_RA007_Epitope_Rep4 996.6668663563198 996.66576993586 56.419 2 -0.7681175983352174 0.2323327679032377 1.0 ['ENSG00000178409|ENST00000369042|BEND3', 'BEND3|p.E692Rfs*21|1|0.12|ENSG00000178409|chr6:107069117-107069118|-/G|frameshift_variant'] 78589 5660 PDSDDEILEHT True H1975_Epitope_Rep2 1269.5360904653699 1269.53498993586 26.768 2 -0.7682304661426941 0.2323417058745446 1.0 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 14889 13469 DYIRHLARR True NCI_RA007_Epitope_Rep1 1198.6683229082998 1198.66777496793 56.394 1 -0.768262637704405 0.2323417058745446 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|85|2|sense'] 101592 14131 SPEPEPEP True PC9_epitope_Rep3 880.3814277472799 880.38032993586 59.439 2 -0.7682732118591996 0.2323417058745446 1.0 ['ENSG00000092295|ENST00000206765|TGM1'] 125495 15085 VLVLKQFLL True PC9_epitope_Rep6 1071.70560285047 1071.7045099358602 70.082 2 -0.7683069084553384 0.2323417058745446 1.0 ['ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 80521 21389 PLLPAEPA True PC9_epitope_Rep2 806.4538048419 806.45270993586 87.743 2 -0.768308710142899 0.2323417058745446 1.0 ['ENST00000512731.5_1_1:1567737-1568735:+|nuORF', 'ENST00000234610.5_1_1:1631484-1633139:+|nuORF'] 123804 8485 VITLDKQV True NCI_RA007_Epitope_Rep3 914.5436824754601 914.54258993586 40.451 2 -0.7683135878268513 0.2323417058745446 1.0 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 83640 9487 QEADQLWRRLQ True H1975_Epitope_Rep1 1441.74261004737 1441.7415099358602 41.411 2 -0.7683650236838415 0.2323461742670049 1.0 ['ENSG00000163820|ENST00000296137|FYCO1', 'nc|ENSG00000163820|Q9BQS8-4|FYCO1'] 99161 18317 SLAQLLGKISN True NCI_RA007_Epitope_Rep5 1142.6659228664598 1142.66482993586 77.257 2 -0.7683779685001448 0.2323461742670049 1.0 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 27398 9961 FNDGNAAVV True PC9_epitope_Rep4 905.4242956187699 905.42374496793 45.973 1 -0.7684173485570157 0.2323461742670049 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 127647 18037 VRELRGLG True NCI_RA007_Epitope_Rep1 898.5348491272598 898.53374993586 74.299 2 -0.7685504413155341 0.23237224393481307 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 112890 22833 TPPPSLKELL True PC9_epitope_Rep2 1093.63831113629 1093.63720993586 93.316 2 -0.7685637419816916 0.23238356487626463 1.0 ['ENSG00000124104|ENST00000491381|SNX21'] 119275 15009 VELHIGKVV True PC9_epitope_Rep5 992.6018660579199 992.60076993586 62.735 2 -0.7686127293176553 0.23243912870352618 1.0 ['ENSG00000086967|ENST00000357701|MYBPC2'] 139731 5823 YTWRWVWSWEW True PC9_epitope_Rep6 1683.7622828627896 1683.76063490379 30.614 3 -0.76869229406196 0.2324514835132425 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 74390 9437 NITKCLPQL True PC9_epitope_Rep4 1028.5688516774799 1028.56774993586 43.911 2 -0.768698458248464 0.2324514835132425 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-3|RXFP1', 'RXFP1|p.F459Lfs*3|1|0.18|ENSG00000171509|chr4:158646820-158646835|TTCGTGATCGGAGGCT/-|frameshift_variant'] 127899 24631 VRPHLTSTKV True PC9_epitope_Rep4 1136.6665915728001 1136.66607496793 103.23 1 -0.7687097587128293 0.2324514835132425 1.0 ['RAB38|p.K194R|1|0.34|ENSG00000123892|chr11:88114043-88114043|T/C|missense_variant'] 134021 18811 WPWMRLFFKIK True H1975_Epitope_Rep1 1550.8584321770998 1550.8573299358602 78.437 2 -0.7687192162213308 0.2324514835132425 1.0 ['MYH15|p.H1065Pfs*7|1|0.16|ENSG00000144821|chr3:108437641-108437641|T/-|frameshift_variant', 'ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF'] 124874 20813 VLLLRQEPQR True NCI_RA007_Epitope_Rep4 1250.7459045226599 1250.74426490379 90.177 3 -0.7687250721772108 0.2324514835132425 1.0 ['ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant'] 136839 221 YIVGWRTGLCE True NCI_RA007_Epitope_Rep3 1295.63324283919 1295.63158490379 1.2648 3 -0.7688804178188311 0.23252178785778538 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 82106 5909 PTAGAFNHSDL True H1975_Epitope_Rep2 1128.51998690876 1128.5188899358602 27.715 2 -0.768942343397059 0.23256259769369156 1.0 ['ENSG00000184292|ENST00000371225|TACSTD2'] 84259 5972 QEVWRQRYQS True H1975_Epitope_Rep2 1378.6741961343798 1378.67254490379 27.95 3 -0.7690141045028009 0.23256465453687594 1.0 ['nc|ENSG00000140992|O15530-4|PDPK1', 'nc|ENSG00000140992|O15530-2|PDPK1', 'nc|ENSG00000140992|O15530-3|PDPK1', 'ENSG00000140992|ENST00000342085|PDPK1'] 65689 5987 LSHGKRNP True H1975_Epitope_Rep3 907.4987979717099 907.49770993586 28.04 2 -0.7690379817310915 0.23256465453687594 1.0 ['ENST00000472109.1_1_17:42797561-42797837:-|nuORF'] 38315 14603 HFRRWTQRRRR True NCI_RA007_Epitope_Rep1 1653.9301255202897 1653.9290299358602 60.853 2 -0.7690385155377719 0.23256465453687594 1.0 ['ENST00000233468.4_1_2:24290678-24291201:-|nuORF'] 15310 19160 EAISYVREKTK True H1975_Epitope_Rep3 1322.7194149913 1322.7183099358601 80.347 2 -0.7690413317698056 0.23256465453687594 1.0 ['nc|ENSG00000138031|O60266-2|ADCY3', 'ENSG00000138031|ENST00000679454|ADCY3'] 43021 8210 IGGDYDGAGKF True H1975_Epitope_Rep3 1098.4981888350198 1098.49708993586 36.562 2 -0.769068711915164 0.23256465453687594 1.0 ['nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2'] 105140 5187 STLSNLSQAK True NCI_RA007_Epitope_Rep5 1047.55603806431 1047.5549499358601 26.646 2 -0.7690845253149371 0.23256465453687594 1.0 ['ENST00000550254.1_1_12:49580073-49582762:-|nuORF'] 78022 18883 PALNEKQL True PC9_epitope_Rep2 911.5076313199099 911.50652993586 77.999 2 -0.7690918310766164 0.23256465453687594 1.0 ['ENSG00000178772|ENST00000323830|CPN2'] 92664 19350 RRGGGHAG True PC9_epitope_Rep6 766.3946672563399 766.39356993586 87.078 2 -0.76909351391271 0.23256465453687594 1.0 ['ENST00000357360.4_1_X:153707219-153707480:-|nuORF'] 19260 18285 ELLKMRRCA True NCI_RA007_Epitope_Rep5 1118.60525426954 1118.60414993586 77.133 2 -0.7691401730663548 0.2325759698037539 1.0 ['ENST00000433078.5_1_7:86848977-86849826:-|nuORF'] 133926 21908 WNRRVQQRRHL True NCI_RA007_Epitope_Rep1 1547.8657939282298 1547.86414490379 89.704 3 -0.7691710401770958 0.23258385551050498 1.0 ['ENST00000589838.5_1_19:11548888-11548933:+|nuORF'] 83140 6696 PYRQRWAWRTW True H1975_Epitope_Rep1 1604.8112987438797 1604.8096649037902 30.806 3 -0.7691932556359897 0.23258385551050498 1.0 ['ENST00000491400.5_1_6:35254110-35255623:+|nuORF', 'ENST00000469195.5_3_6:35254110-35258154:+|nuORF', 'ENST00000229405.8_1_6:35254110-35258558:+|nuORF'] 91605 24067 RPDLLCQRR True H1975_Epitope_Rep2 1155.6294948714299 1155.62785490379 99.102 3 -0.7692481608304369 0.23260648414348267 1.0 ['ENST00000583283.1_1_17:61904916-61905045:+|nuORF'] 19483 5650 ELQESSYSCE True H1975_Epitope_Rep2 1173.4495839600897 1173.4484899358602 26.731 2 -0.7692513441538139 0.23260648414348267 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 50490 2065 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 10.695 3 -0.7692952781382585 0.23261779795954474 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 127224 20481 VQIEQEFL True PC9_epitope_Rep6 1004.5178616504398 1004.51676993586 91.501 2 -0.7692970165965535 0.23262911144200857 1.0 ['ENST00000426279.1_1_X:44168653-44169127:-|nuORF'] 93044 21780 RRRHRGRHL True PC9_epitope_Rep4 1242.7394712162998 1242.73783490379 91.971 3 -0.76934648167305 0.2326517374062007 1.0 ['ENST00000543476.5_1_12:21590648-21593357:+|nuORF'] 136742 13198 YINLFHFPPLI True PC9_epitope_Rep6 1372.75434394804 1372.7527049037901 62.412 3 -0.7693483317847023 0.2326517374062007 1.0 ['ENSG00000091436|ENST00000375213|MAP3K20'] 80526 11242 PLLPWLRPWA True H1975_Epitope_Rep1 1247.7178988696699 1247.71680993586 48.218 2 -0.769380794853602 0.23267779219247553 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 133645 19469 WKLQVLEMRD True NCI_RA007_Epitope_Rep5 1316.6910920684797 1316.6894549037902 81.776 3 -0.7694075665926259 0.23268669477284118 1.0 ['ENSG00000279804|ENST00000624297|PRAMEF18', 'ENSG00000204480|ENST00000376101|PRAMEF19'] 14626 9480 DVLRGPNTI True PC9_epitope_Rep2 983.53999407735 983.53888993586 41.806 2 -0.7694195699275672 0.23268669477284118 1.0 ['ENSG00000205108|ENST00000378788|FAM205A'] 36335 5990 GVGYYSHEVGR True NCI_RA007_Epitope_Rep2 1222.5730851107799 1222.57198993586 27.91 2 -0.7694222340304242 0.23268669477284118 1.0 ['ENSG00000160111|ENST00000443236|CPAMD8', 'nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'CPAMD8|p.V1154Sfs*25|1|0.33|ENSG00000160111|chr19:16928060-16928060|C/-|frameshift_variant'] 122141 17194 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 72.911 1 -0.7694380819464977 0.23268669477284118 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 36805 4336 GVPPPAFEWYK True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 21.667 3 -0.7694547564262251 0.23268669477284118 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 52120 18918 KLRSATASRRG True NCI_RA007_Epitope_Rep5 1201.7003513125699 1201.69924993586 79.607 2 -0.7694802362955332 0.23268669477284118 1.0 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 12929 8788 DLNLRQFGP True PC9_epitope_Rep3 1058.5508931142201 1058.5497899358602 38.755 2 -0.7694855514855049 0.2327127463553413 1.0 ['ENSG00000227057|ENST00000374617|WDR46'] 24151 14942 EYSYRQRERER True H1975_Epitope_Rep1 1570.76005101666 1570.75894993586 62.713 2 -0.7695309409848857 0.23272405660377357 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 121597 22425 VGLAVFLIYKF True PC9_epitope_Rep2 1268.7532813188798 1268.75218993586 91.749 2 -0.7696219896897957 0.23272952378144943 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 58019 11689 LEREQMLFR True PC9_epitope_Rep6 1220.6335771923598 1220.63194490379 56.092 3 -0.7696754295753082 0.23272952378144943 1.0 ['CCDC138|p.L218M|1|0.04|ENSG00000163006|chr2:108798503-108798503|C/A|missense_variant'] 81645 7881 PRSCHCTPAWR True PC9_epitope_Rep3 1312.59172946372 1312.59007490379 35.299 3 -0.7697009310145736 0.23272952378144943 1.0 ['AluSc_dup26247|chr14:55143427-55143722:-|1.6368109521386809|0.0255733500930304|6.0|501.0|11|3|sense'] 35343 14019 GSYRHHLMVNP True PC9_epitope_Rep1 1309.63497417469 1309.63386993586 58.762 2 -0.7697116618969995 0.23272952378144943 1.0 ['ENST00000437621.6_1_7:1624674-1624941:+|nuORF'] 22941 8509 EVHAGVGEPL True NCI_RA007_Epitope_Rep3 1006.5083595958998 1006.50726993586 40.544 2 -0.7697156828744851 0.23272952378144943 1.0 ['ENST00000419794.1_1_9:34318647-34318803:+|nuORF'] 97847 12344 SHIGQYNCS True PC9_epitope_Rep4 1007.4130793120702 1007.41257496793 55.29 1 -0.769769746300063 0.23272952378144943 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 68025 6734 LTMYFQQYWR True NCI_RA007_Epitope_Rep1 1434.6754420043399 1434.67378490379 30.205 3 -0.7698143870838883 0.23272952378144943 1.0 ['nc|ENSG00000166206|P28472-3|GABRB3', 'nc|ENSG00000166206|P28472-2|GABRB3', 'ENSG00000166206|ENST00000311550|GABRB3'] 78432 6823 PCCGCCCG True PC9_epitope_Rep6 744.15217989724 744.15162496793 35.106 1 -0.7698257784901053 0.2327339719970523 1.0 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 92720 19907 RRKDERRKEKR True NCI_RA007_Epitope_Rep3 1555.9131380434699 1555.91149490379 86.76 3 -0.7698522476847829 0.2327339719970523 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 140054 27508 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 113.49 3 -0.7698784435588581 0.2327339719970523 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 122267 16887 VGRRRTSR True NCI_RA007_Epitope_Rep3 986.5845932843399 986.58404496793 74.296 1 -0.7698968899497824 0.23274184990862465 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 61915 13525 LLLLLLLL True NCI_RA007_Epitope_Rep4 922.68307650074 922.68196993586 59.232 2 -0.7698982131542731 0.23274184990862465 1.0 ['ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'UCN3|p.P18H|1|0.47|ENSG00000178473|chr10:5373773-5373773|C/A|missense_variant', 'PLBD1|p.N149Ifs*17|1|0.25|ENSG00000121316|chr12:14540881-14540881|C/-|frameshift_variant', 'ENSG00000183971|ENST00000566435|NPW', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000182685|ENST00000328540|BRICD5', 'ENSG00000117899|ENST00000261758|MESD', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENSG00000184709|ENST00000371542|LRRC26', 'FAT1|p.H507Rfs*6|1|0.13|ENSG00000083857|chr4:186708307-186708308|AT/-|frameshift_variant', 'ENSG00000121316|ENST00000240617|PLBD1', 'FAT1|p.N618Tfs*9|1|0.18|ENSG00000083857|chr4:186707975-186707975|T/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENSG00000178473|ENST00000380433|UCN3', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENSG00000070031|ENST00000176195|SCT', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'nc|ENSG00000117899|Q14696-2|MESD', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-4|SHBG', 'nc|ENSG00000129214|P04278-3|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000129214|P04278-5|SHBG', 'ENSG00000129214|ENST00000380450|SHBG', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000125810|ENST00000246006|CD93', 'ENSG00000109758|ENST00000382774|HGFAC', 'SHBG|p.L175Afs*39|1|0.14|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'CD93|p.E121Rfs*79|1|0.71|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'ENSG00000167680|ENST00000586582|SEMA6B', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ADGRB1|p.D708Tfs*49|1|0.15|ENSG00000181790|chr8:142481700-142481700|G/-|frameshift_variant', 'ATRN-TNKS2|2|fusion', 'ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant', 'ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000162337|ENST00000294304|LRP5', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 85858 10167 QNFQCWVLP True H1975_Epitope_Rep2 1133.5328005219299 1133.53114490379 44.109 3 -0.7699126198774757 0.23275315756119846 1.0 ['nc|ENSG00000134884|Q9NWB6-3|ARGLU1', 'nc|ENSG00000134884|Q9NWB6-2|ARGLU1'] 23141 6463 EVNEDIQP True NCI_RA007_Epitope_Rep1 942.42944056886 942.42834993586 29.162 2 -0.7700079076505567 0.23277577186648 1.0 ['nc|ENSG00000132463|Q12849-5|GRSF1', 'ENSG00000132463|ENST00000254799|GRSF1', 'ENST00000505068.5_1_4:71691792-71705589:-|nuORF'] 60820 23990 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 98.798 3 -0.7700176980135368 0.23277577186648 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 28543 20640 FSKPPPFFP True PC9_epitope_Rep5 1062.5538532363398 1062.5527499358602 84.445 2 -0.7700583102029737 0.23280181560952606 1.0 ['nc|ENSG00000145216|Q6UN15-3|FIP1L1', 'nc|ENSG00000145216|Q6UN15-5|FIP1L1', 'ENST00000513008.5_1_4:54292015-54325613:+|nuORF', 'nc|ENSG00000145216|Q6UN15-4|FIP1L1', 'ENSG00000145216|ENST00000337488|FIP1L1', 'ENST00000513975.5_1_4:54244032-54306933:+|nuORF', 'ENST00000505125.5_1_4:54245288-54325613:+|nuORF'] 101683 11981 SPFVVNVAP True H1975_Epitope_Rep2 928.5018176634799 928.50072993586 51.166 2 -0.7700943421711212 0.232809690824958 1.0 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant'] 36667 16957 GVLRWQQRL True PC9_epitope_Rep6 1154.66726027914 1154.6661699358601 77.77 2 -0.770117097517968 0.232809690824958 1.0 ['ENSG00000011376|ENST00000645846|LARS2', 'ENST00000467936.5_1_3:45542057-45579920:+|nuORF'] 9041 12109 AVIGLTKSV True PC9_epitope_Rep5 886.5487678559 886.54766993586 51.568 2 -0.7701382695008178 0.23285046935557552 1.0 ['ENST00000475058.5_1_4:104000861-104006895:-|nuORF', 'nc|ENSG00000164039|Q9BUT1-3|BDH2', 'ENSG00000164039|ENST00000296424|BDH2'] 126861 12731 VPTLSSWL True NCI_RA007_Epitope_Rep4 901.49091862661 901.48982993586 56.027 2 -0.770166431308294 0.23285834278893622 1.0 ['ENST00000491066.1_1_X:153697015-153697611:+|nuORF'] 111110 14335 TLEKIQFIS True PC9_epitope_Rep1 1077.6070110080097 1077.6059099358602 59.964 2 -0.7701865553417357 0.23285834278893622 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 27166 10068 FLSGCPWPGFC True NCI_RA007_Epitope_Rep3 1212.5096225491998 1212.50797490379 46.697 3 -0.7701949860351597 0.23286964722525125 1.0 ['ENST00000594803.1_1_19:58233776-58238980:-|nuORF', 'ENST00000599961.1_1_19:58234694-58238980:-|nuORF'] 85517 18845 QLKIEDVG True NCI_RA007_Epitope_Rep5 900.4916469025999 900.49054993586 79.333 2 -0.7702811198885736 0.23288882339939587 1.0 ['LY9|p.A332V|1|0.11|ENSG00000122224|chr1:160814684-160814684|C/T|missense_variant'] 45791 5395 ISNVMICPFRH True NCI_RA007_Epitope_Rep2 1315.6529327379499 1315.65127490379 25.604 3 -0.7702991969234996 0.23288882339939587 1.0 ['ENST00000478105.5_1_21:47981571-47987532:+|nuORF'] 140055 27571 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 113.83 3 -0.7703119439251871 0.23288882339939587 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 63397 7579 LPGAWHFPGLP True NCI_RA007_Epitope_Rep1 1190.62366413166 1190.62201490379 33.474 3 -0.7703294137588542 0.23289427157001413 1.0 ['ENSG00000253831|ENST00000454449|ETV3L'] 93119 25069 RRRREEERCKK True PC9_epitope_Rep2 1544.84300987832 1544.84190993586 102.1 2 -0.7703674157696915 0.23289427157001413 1.0 ['ENST00000457924.2_1_17:20279644-20279995:-|nuORF', 'ENST00000480362.5_1_13:115047204-115067220:+|nuORF', 'nc|ENSG00000169062|Q9H1J1-2|UPF3A', 'ENSG00000169062|ENST00000375299|UPF3A'] 23504 7614 EWFWWYWQKEK True H1975_Epitope_Rep1 1714.7932486378998 1714.79161490379 34.276 3 -0.7703732358956865 0.23289427157001413 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 138635 23266 YRRKLQHFQEE True PC9_epitope_Rep6 1532.7848092125203 1532.78370993586 102.59 2 -0.7703753384012285 0.23289427157001413 1.0 ['ENSG00000198865|ENST00000361970|CCDC152', 'nc|ENSG00000198865|Q4G0S7-2|CCDC152'] 46126 18094 ITAHHTEVLP True PC9_epitope_Rep1 1116.5927579262 1116.5916699358602 74.392 2 -0.7704185975868196 0.23289427157001413 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 12812 17423 DLKEFTKP True PC9_epitope_Rep1 976.5229470308799 976.52184993586 71.814 2 -0.7704269368130873 0.23289427157001413 1.0 ['ENSG00000127329|ENST00000334414|PTPRB', 'nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB'] 55229 20289 LAPVLSFSSL True PC9_epitope_Rep5 1032.58554728744 1032.5844499358602 83.091 2 -0.7704422712567471 0.23289427157001413 1.0 ['nc|ENSG00000187243|Q96JG8-3|MAGED4', 'ENST00000470594.5_1_X:51809762-51812242:-|nuORF'] 86293 19779 QQELLDKIKEE True H1975_Epitope_Rep3 1371.7245599413898 1371.72346993586 82.821 2 -0.7705098797642698 0.23290214220467337 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-1|ZMYM6', 'ENST00000471566.1_1_1:35496087-35496240:-|nuORF', 'ENST00000493328.5_1_1:35480755-35496240:-|nuORF', 'nc|ENSG00000163867|O95789-2|ZMYM6', 'nc|ENSG00000163867|O95789-4|ZMYM6'] 19636 19081 ELRRLRRLLWD True NCI_RA007_Epitope_Rep2 1524.9001137482799 1524.89900993586 79.077 2 -0.770541345458895 0.23290214220467337 1.0 ['ENSG00000105538|ENST00000222145|RASIP1', 'ENST00000601530.1_1_19:49224057-49228265:-|nuORF'] 81715 8407 PSADQHKSK True H1975_Epitope_Rep1 996.4988575413599 996.49776993586 37.266 2 -0.7705721074338117 0.2329100123755083 1.0 ['UBA1|p.R880Q|2|0.18|ENSG00000130985|chrX:47212856-47212856|G/A|missense_variant'] 80452 16080 PLKPWPPEF True NCI_RA007_Epitope_Rep1 1109.59096702105 1109.5898699358602 66.651 2 -0.7705829685989709 0.2329100123755083 1.0 ['ENST00000458235.5_2_19:17937194-17937548:-|nuORF'] 24873 188 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 1.0203 2 -0.770625886431859 0.23292131355245518 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 128803 11109 VSRKMTNFIMK True PC9_epitope_Rep3 1353.7260976782102 1353.72445490379 47.728 3 -0.7706540067166278 0.23293362010547716 1.0 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4'] 122389 10346 VGSGGEGALL True NCI_RA007_Epitope_Rep4 858.4446967101799 858.44414496793 46.652 1 -0.7706969410426688 0.23293362010547716 1.0 ['ENST00000409185.5_1_2:131808364-131808481:-|nuORF'] 67059 21574 LTATPRDVLQI True PC9_epitope_Rep1 1225.70303665117 1225.70192993586 87.805 2 -0.7707273695487985 0.23293362010547716 1.0 ['ENST00000581080.1_1_17:38497122-38497602:-|nuORF'] 42105 20139 IEELRVPSL True PC9_epitope_Rep5 1054.60225998074 1054.60116993586 82.512 2 -0.7707481688699983 0.23293362010547716 1.0 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2'] 5883 6511 APGSAKSLT True PC9_epitope_Rep5 830.44978209062 830.44868993586 30.018 2 -0.7707516639798795 0.23293362010547716 1.0 ['nc|ENSG00000165626|Q8N7W2-3|BEND7'] 126082 17584 VPDASQDYGP True PC9_epitope_Rep4 1047.45090428943 1047.44980993586 75.652 2 -0.7707870588615082 0.23294249351873675 1.0 ['PTGS1|p.D588Y|1|0.32|ENSG00000095303|chr9:122392506-122392506|G/T|missense_variant'] 17844 9382 EIAPAAHLDP True H1975_Epitope_Rep1 1032.52400966004 1032.52290993586 40.998 2 -0.7707878146208579 0.23294249351873675 1.0 ['ENSG00000173599|ENST00000393960|PC', 'nc|ENSG00000173599|P11498-2|PC'] 62568 10884 LLTSPGPT True PC9_epitope_Rep1 784.43306939732 784.43196993586 46.749 2 -0.7707939710568239 0.23294249351873675 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 140823 17371 YYSQDDNC True H1975_Epitope_Rep1 1006.3338259318599 1006.33327496793 72.286 1 -0.7707948715641546 0.23294249351873675 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608566.1_1_1:172502539-172520775:+|nuORF'] 59447 13906 LGMRPVGLVLR True PC9_epitope_Rep1 1209.7379826912497 1209.73633490379 58.326 3 -0.770822965029726 0.23294249351873675 1.0 ['ENST00000392097.4_1_1:169455486-169455657:+|nuORF'] 69151 6292 LVLQPRGGS True NCI_RA007_Epitope_Rep2 925.5345147740899 925.53340993586 29.08 2 -0.7708289525975552 0.23294249351873675 1.0 ['ENST00000574977.1_1_16:71715749-71718559:-|nuORF', 'ENST00000568954.5_2_16:71715749-71724503:-|nuORF'] 27397 11046 FNDGNAAVV True PC9_epitope_Rep3 905.4242956187699 905.42374496793 47.481 1 -0.7708667259286613 0.23299455000736485 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 3211 11193 AGETQGSLSVA True PC9_epitope_Rep4 1018.4931034545799 1018.49200993586 50.832 2 -0.7708681303143774 0.23299455000736485 1.0 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 135741 6858 YEKYNKWETIE True H1975_Epitope_Rep1 1501.7089098772497 1501.70780993586 31.423 2 -0.7708910921875416 0.23300584760866683 1.0 ['ENSG00000153002|ENST00000282957|CPB1'] 100191 20099 SLLGSENSVP True PC9_epitope_Rep2 1001.5029398622901 1001.50184993586 82.719 2 -0.7710123289089877 0.23300684881066352 1.0 ['ENST00000414141.1_1_2:70351366-70351546:-|nuORF'] 99052 14240 SKVEKKHLP True PC9_epitope_Rep1 1064.6342288153598 1064.63312993586 59.599 2 -0.771018221664927 0.23300684881066352 1.0 ['nc|ENSG00000187624|Q6ZQX7-2|LIAT1', 'ENSG00000187624|ENST00000360127|C17orf97', 'nc|ENSG00000187624|Q6ZQX7-3|LIAT1', 'nc|ENSG00000187624|Q6ZQX7|LIAT1'] 30753 7868 GAPAETAVAA True PC9_epitope_Rep2 856.4290466460399 856.4279499358599 35.631 2 -0.7710320563095124 0.23300684881066352 1.0 ['ENST00000573331.5_1_17:7297739-7306647:-|nuORF'] 120787 7970 VGCVCWARP True PC9_epitope_Rep3 989.4575274066898 989.45642993586 35.633 2 -0.7710413081869263 0.23300684881066352 1.0 ['ENST00000605589.1_1_1:184355274-184355667:-|nuORF'] 80888 7135 PLWRSPGS True H1975_Epitope_Rep3 898.4661008610999 898.4650099358599 32.416 2 -0.7710719500342839 0.2330147134630396 1.0 ['ENST00000394434.6_1_5:145557197-145562175:-|nuORF'] 63693 19240 LPPWRPWWWNR True NCI_RA007_Epitope_Rep2 1592.8153214951597 1592.81422993586 79.729 2 -0.771109556886873 0.2330147134630396 1.0 ['ENSG00000174276|ENST00000310597|ZNHIT2'] 45878 16060 ISQSVINYVE True PC9_epitope_Rep2 1150.5870038394198 1150.5859099358602 67.03 2 -0.7711117355047373 0.23302600960263925 1.0 ['nc|ENSG00000134313|Q9ULH0-4|KIDINS220', 'KIDINS220|p.Q48Hfs*6|1|0.26|ENSG00000134313|chr2:8818756-8818758|CCT/AA|frameshift_variant', 'ENSG00000134313|ENST00000256707|KIDINS220', 'ENST00000496725.1_1_2:8967049-8967241:-|nuORF', 'nc|ENSG00000134313|Q9ULH0-3|KIDINS220'] 28714 17755 FSVLFHPTF True PC9_epitope_Rep2 1093.55966689277 1093.55856993586 73.576 2 -0.7711401917120246 0.2330373054095053 1.0 ['ENST00000225728.7_1_17:6547635-6547686:-|nuORF'] 65506 6779 LSFSKDPS True NCI_RA007_Epitope_Rep2 879.43379767331 879.43270993586 30.984 2 -0.7712578521739919 0.2330844782141332 1.0 ['ENST00000354670.8_1_15:40382930-40383443:-|nuORF'] 93029 15534 RRRGWREQRHR True H1975_Epitope_Rep1 1591.8780899474298 1591.8769899358601 65.026 2 -0.7713595859836435 0.2330844782141332 1.0 ['ENST00000568956.1_1_19:56116859-56125214:+|nuORF'] 73397 5895 NERRHNYTTPK True H1975_Epitope_Rep1 1414.7065588918197 1414.70546993586 27.746 2 -0.7713784382927529 0.2330844782141332 1.0 ['ENSG00000105877|ENST00000409508|DNAH11'] 117923 6443 VAQQFSLPQE True NCI_RA007_Epitope_Rep1 1145.57168812845 1145.5705899358602 29.083 2 -0.7714343278483121 0.2330844782141332 1.0 ['ENSG00000155066|ENST00000317620|PROM2', 'nc|ENSG00000155066|Q8N271-2|PROM2', 'ENST00000463580.5_1_2:95940333-95943708:+|nuORF', 'ENST00000431567.5_1_2:95941253-95943708:+|nuORF'] 62564 13457 LLTQYFQI True PC9_epitope_Rep6 1024.5593325395998 1024.55822993586 63.455 2 -0.7714630812240174 0.2330844782141332 1.0 ['ENST00000507447.1_1_5:54960464-54965471:-|nuORF'] 114676 4382 TSRPAVSTGT True NCI_RA007_Epitope_Rep5 975.49852318819 975.4974299358599 23.479 2 -0.7714685609489524 0.2330844782141332 1.0 ['ENST00000540568.1_1_12:132404621-132404756:+|nuORF'] 96718 10537 SEQESVSVGC True H1975_Epitope_Rep3 1023.4178899089899 1023.41737496793 45.597 1 -0.7714832850996103 0.2330844782141332 1.0 ['nc|ENSG00000285231|A0A2R8YFM6|OOSP3'] 59127 12008 LGELVRDTL True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 51.215 2 -0.7715449516728886 0.2330844782141332 1.0 ['nc|ENSG00000187905|Q6ZQY2-2|LRRC74B', 'ENSG00000187905|ENST00000442047|LRRC74B'] 55496 19489 LAVPQHRVR True NCI_RA007_Epitope_Rep1 1074.6410455313 1074.6399499358602 79.967 2 -0.7715468410846095 0.2330844782141332 1.0 ['nc|ENSG00000275183|Q96B70|LENG9', 'ENSG00000275183|ENST00000611161|LENG9', 'LENG9|p.P188Cfs*38|1|0.29|ENSG00000275183|chr19:54462965-54462966|-/GGCA|frameshift_variant'] 98518 8500 SILGSSKILL True NCI_RA007_Epitope_Rep5 1029.6433965167298 1029.6422899358602 39.379 2 -0.7715598707594493 0.2330844782141332 1.0 ['ENST00000555658.5_1_14:89730286-89817056:-|nuORF'] 75203 6694 NPAGLAATAM True PC9_epitope_Rep4 915.44840219163 915.44730993586 32.932 2 -0.7715805721170405 0.2330844782141332 1.0 ['ENSG00000164244|ENST00000296666|PRRC1', 'nc|ENSG00000164244|Q96M27-3|PRRC1', 'nc|ENSG00000164244|Q96M27-2|PRRC1', 'nc|ENSG00000164244|Q96M27-4|PRRC1', 'nc|ENSG00000164244|Q96M27-5|PRRC1', 'ENST00000512871.1_1_5:126859171-126859306:+|nuORF', 'PRRC1|p.L63Pfs*42|2|0.23|ENSG00000164244|chr5:127524610-127524611|-/C|frameshift_variant'] 22729 13878 ETYPALTYVE True PC9_epitope_Rep1 1184.56012038524 1184.55902993586 58.221 2 -0.7715937014131465 0.2330844782141332 1.0 ['KCNC2|p.D279Y|1|0.15|ENSG00000166006|chr12:75051170-75051170|C/A|missense_variant'] 140057 27758 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 114.85 3 -0.7716124450241735 0.2330957709977618 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 50494 2429 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 12.556 3 -0.77166805514337 0.23311835556733515 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 59041 14117 LGAWRGEGLLQ True PC9_epitope_Rep3 1198.64585612822 1198.64474993586 59.386 2 -0.7716770236131228 0.23311835556733515 1.0 ['ENST00000343242.8_1_7:1580346-1581177:+|nuORF'] 41752 10001 IDPHRTVKEK True H1975_Epitope_Rep3 1221.68296991293 1221.68186993586 43.505 2 -0.7717447711869949 0.23313750607358982 1.0 ['ENST00000469698.5_1_17:39981777-39991902:-|nuORF', 'nc|ENSG00000141698|Q969T7-2|NT5C3B', 'ENSG00000141698|ENST00000435506|NT5C3B', 'ENST00000393910.5_1_17:39983688-39992209:-|nuORF'] 2397 9991 AEQKKWEEQHE True NCI_RA007_Epitope_Rep1 1440.66335666716 1440.66224993586 42.868 2 -0.7717636761560408 0.23313750607358982 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 28738 5881 FSWLYTMIK True NCI_RA007_Epitope_Rep4 1187.60490283303 1187.6032649037902 29.245 3 -0.7717639003276661 0.23313750607358982 1.0 ['ENSG00000174145|ENST00000309447|NWD2'] 72637 23137 MVWPRRRQRLL True PC9_epitope_Rep4 1509.8826898623297 1509.88105490379 97.216 3 -0.7718052974849903 0.23314879707883035 1.0 ['ENST00000370272.8_1_1:93811706-93811775:+|nuORF', 'ENST00000370267.1_1_1:93811706-93812169:+|nuORF'] 55228 20982 LAPTFLEAT True PC9_epitope_Rep4 961.5120479940099 961.51149496793 88.868 1 -0.77183352542344 0.2331748111721315 1.0 ['ENST00000421182.5_1_2:216300616-216300775:-|nuORF'] 74078 9363 NHVANSPVSI True PC9_epitope_Rep2 1036.53015766964 1036.5290699358602 41.349 2 -0.7719633748631781 0.23320623610640834 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 65845 9622 LSKPVAKNL True H1975_Epitope_Rep3 968.60186605792 968.60076993586 42.026 2 -0.7719716922925098 0.23320623610640834 1.0 ['ENSG00000188112|ENST00000341865|C6orf132'] 29952 16030 FWWYRGSLFIY True H1975_Epitope_Rep2 1536.7554065771997 1536.7543099358602 66.857 2 -0.7719827021605429 0.23320623610640834 1.0 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF'] 72956 5077 NCKKGVEHEKI True NCI_RA007_Epitope_Rep2 1283.6656055966298 1283.66395490379 24.373 3 -0.7720197210264216 0.23320623610640834 1.0 ['ENSG00000133302|ENST00000265140|SLF1'] 46952 14555 IVLWGFRWLI True PC9_epitope_Rep5 1301.7648490620898 1301.76319490379 60.985 3 -0.7720310887865885 0.23320623610640834 1.0 ['ENSG00000103227|ENST00000262301|LMF1'] 72133 12304 MREREREQRWR True H1975_Epitope_Rep3 1630.8222744337397 1630.82116993586 52.508 2 -0.7720627777344772 0.23320623610640834 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 30389 21072 GAEVIWYKG True PC9_epitope_Rep5 1021.5232813840499 1021.52218993586 86.114 2 -0.772089919256405 0.23320623610640834 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 92357 19050 RQPRLRLPT True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 80.137 2 -0.7721093261963695 0.23320623610640834 1.0 ['nc|ENSG00000112425|B3EWF7|EPM2A'] 93492 14337 RSIRKKRSP True NCI_RA007_Epitope_Rep4 1126.70470841702 1126.7036099358602 62.452 2 -0.7721740016525648 0.23324010010304724 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 102073 3200 SPPRRARHGS True NCI_RA007_Epitope_Rep1 1119.6009716244698 1119.5998699358602 16.341 2 -0.7722020759350054 0.23324010010304724 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 50495 2519 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 12.986 3 -0.7722163056066682 0.23324010010304724 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 87674 17530 QVDARGNILL True PC9_epitope_Rep3 1097.61930702721 1097.61820993586 72.613 2 -0.7722802363900028 0.23326610825690774 1.0 ['GABRB1|p.H364R|1|0.11|ENSG00000163288|chr4:47425684-47425684|A/G|missense_variant'] 43003 11768 IGEMAADI True PC9_epitope_Rep4 818.3844049527399 818.38330993586 53.033 2 -0.7723544370515072 0.2332921156450568 1.0 ['ENSG00000163116|ENST00000295268|STPG2'] 66470 12845 LSRRSSLV True NCI_RA007_Epitope_Rep1 916.54541381096 916.54430993586 53.954 2 -0.7724107317978345 0.23329996761562694 1.0 ['nc|ENSG00000174996|Q9H0B6-2|KLC2', 'ENSG00000174996|ENST00000394067|KLC2', 'ENST00000443339.5_1_3:9475845-9476039:+|nuORF', 'ENST00000493918.5_1_3:9475925-9476039:+|nuORF', 'ENST00000431285.5_1_3:9475191-9476039:+|nuORF'] 115254 9683 TVDGPVQL True PC9_epitope_Rep2 827.43888305375 827.43778993586 42.585 2 -0.7724305374641165 0.23329996761562694 1.0 ['nc|ENSG00000154134|Q96MS0-2|ROBO3', 'ENSG00000154134|ENST00000397801|ROBO3'] 20612 16235 EQETLALLEVK True H1975_Epitope_Rep1 1271.69728256439 1271.69677496793 67.797 1 -0.7725127031049127 0.23332597335688526 1.0 ['ENST00000463670.5_1_1:156255017-156255322:+|nuORF', 'ENST00000495881.1_1_1:156255017-156255866:+|nuORF', 'ENSG00000163472|ENST00000405535|TMEM79'] 12002 4491 DIAELEEPED True H1975_Epitope_Rep2 1158.49282867106 1158.4917299358601 22.387 2 -0.7725290440197089 0.23333725859632595 1.0 ['ENSG00000091536|ENST00000647165|MYO15A'] 37113 6948 GVSSSQPI True PC9_epitope_Rep6 773.3919328613299 773.39082993586 35.671 2 -0.7725329919806675 0.23334167414886883 1.0 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 28336 8844 FSASGKPV True NCI_RA007_Epitope_Rep1 791.41775368635 791.41664993586 38.4 2 -0.7725606692172048 0.23334167414886883 1.0 ['ENSG00000112893|ENST00000261483|MAN2A1'] 122247 15307 VGRRAAKA True NCI_RA007_Epitope_Rep3 827.5089687325898 827.5084249679301 67.767 1 -0.772569841020125 0.23334167414886883 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 42163 10419 IEFGYWRRFQ True NCI_RA007_Epitope_Rep1 1400.69895433024 1400.6978499358602 44.511 2 -0.7726483458917258 0.23335295849278775 1.0 ['ENST00000450453.6_2_1:163292714-163292795:+|nuORF'] 249 10726 AAGGPLYI True H1975_Epitope_Rep2 760.4119400299201 760.41139496793 46.284 1 -0.7726692150646636 0.23335737309215077 1.0 ['ENSG00000177000|ENST00000376590|MTHFR', 'nc|ENSG00000177000|P42898-2|MTHFR'] 15452 7025 EAPCRNMV True H1975_Epitope_Rep3 918.4051574806599 918.40404993586 31.984 2 -0.7726792915660907 0.23335737309215077 1.0 ['ENST00000559781.5_1_15:81624814-81634044:+|nuORF'] 73032 5404 NDELIENAK True H1975_Epitope_Rep3 1044.5087535187201 1044.5076499358602 25.848 2 -0.7726817622938372 0.23335737309215077 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 119912 9941 VEWMEDSWRQR True NCI_RA007_Epitope_Rep2 1520.6830465659198 1520.68194993586 43.295 2 -0.7727474274375404 0.23336522187063066 1.0 ['ENST00000601390.1_1_19:39926180-39926535:-|nuORF'] 97374 19078 SGAVETKLQAI True PC9_epitope_Rep3 1115.6186383208699 1115.61754993586 78.606 2 -0.7727677007630462 0.23336522187063066 1.0 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6', 'nc|ENSG00000124587|Q13608-2|PEX6'] 30580 4224 GAKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 22.622 3 -0.7728259515928675 0.2333750275917887 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 33355 13104 GLEDTEEP True PC9_epitope_Rep6 888.3712569863999 888.37014993586 62.019 2 -0.772826382700658 0.2333750275917887 1.0 ['ENSG00000174885|ENST00000534750|NLRP6', 'nc|ENSG00000174885|P59044|NLRP6'] 37323 9366 GVVSPQPH True PC9_epitope_Rep2 819.42390169595 819.42280993586 41.361 2 -0.7728613154854654 0.2333750275917887 1.0 ['nc|ENSG00000134313|Q9ULH0-4|KIDINS220', 'KIDINS220|p.Q48Hfs*6|1|0.26|ENSG00000134313|chr2:8818756-8818758|CCT/AA|frameshift_variant', 'ENSG00000134313|ENST00000256707|KIDINS220', 'nc|ENSG00000134313|Q9ULH0-2|KIDINS220', 'ENST00000488729.5_1_2:8870852-8965899:-|nuORF'] 59206 5693 LGGAEAGPK True NCI_RA007_Epitope_Rep5 798.42356734278 798.42246993586 28.586 2 -0.7728617776593929 0.2333750275917887 1.0 ['ENSG00000147689|ENST00000690554|FAM83A', 'nc|ENSG00000147689|Q86UY5-3|FAM83A', 'nc|ENSG00000147689|Q86UY5-2|FAM83A'] 25542 5668 FEQKYNFRFEE True H1975_Epitope_Rep1 1535.7044932031502 1535.70283490379 26.871 3 -0.7728844413009519 0.2333750275917887 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 126078 6326 VPCTKILKEL True NCI_RA007_Epitope_Rep4 1142.67331674602 1142.6716649037899 30.936 3 -0.7728912299784243 0.2333750275917887 1.0 116032 10640 TVRGWCKNK True NCI_RA007_Epitope_Rep1 1090.5705830129798 1090.56948993586 45.376 2 -0.7729142978099294 0.2333750275917887 1.0 ['ENST00000498171.5_1_22:20077477-20097628:+|nuORF', 'nc|ENSG00000128191|Q8WYQ5-3|DGCR8', 'ENSG00000128191|ENST00000351989|DGCR8', 'ENST00000485802.1_1_22:20094124-20096613:+|nuORF'] 119394 4781 VENWQGNPIQK True H1975_Epitope_Rep3 1311.6571490879098 1311.6555149037902 23.516 3 -0.7729221068010512 0.2333750275917887 1.0 ['ENSG00000129933|ENST00000262815|MAU2'] 44479 8450 INSKSYVSPP True NCI_RA007_Epitope_Rep2 1090.56587447202 1090.56476993586 37.511 2 -0.7729534981737414 0.2333750275917887 1.0 ['nc|ENSG00000165309|Q5W041-3|ARMC3', 'nc|ENSG00000165309|Q5W041-4|ARMC3', 'ENSG00000165309|ENST00000298032|ARMC3'] 59555 5688 LGRDRMYRRYW True NCI_RA007_Epitope_Rep5 1570.7939344275799 1570.7922749037898 28.567 3 -0.7729602210420252 0.2333750275917887 1.0 ['nc|ENSG00000198604|Q9NRL2-2|BAZ1A', 'ENSG00000198604|ENST00000360310|BAZ1A'] 111916 21173 TLRSSSLSLIL True PC9_epitope_Rep4 1188.70778767844 1188.7061549037899 89.606 3 -0.7730769952334642 0.23340102419212433 1.0 ['ENST00000475242.5_1_20:43991907-44037103:+|nuORF'] 2080 19182 AELKKVLQQMK True H1975_Epitope_Rep3 1314.7693423891799 1314.76824993586 80.434 2 -0.7731104126257762 0.2334123048398252 1.0 ['nc|ENSG00000117155|Q9Y2D8-2|SSX2IP', 'nc|ENSG00000117155|Q9Y2D8-3|SSX2IP', 'ENSG00000117155|ENST00000342203|SSX2IP', 'ENST00000460500.1_1_1:85123956-85128195:-|nuORF'] 119847 14797 VEVPMMLRLL True PC9_epitope_Rep2 1199.67702222747 1199.67538490379 62.18 3 -0.7732536744766202 0.23346773006857177 1.0 ['ENSG00000152104|ENST00000366956|PTPN14'] 67159 9740 LTDESEILRF True PC9_epitope_Rep6 1221.62411762413 1221.62248490379 47.885 3 -0.7733047652061731 0.23347900940272812 1.0 ['ENST00000532395.5_1_17:72947667-72950470:-|nuORF', 'nc|ENSG00000167861|Q8IV36-3|HID1', 'nc|ENSG00000167861|Q8IV36-2|HID1', 'ENSG00000167861|ENST00000425042|HID1'] 81435 6954 PQFHRWPG True NCI_RA007_Epitope_Rep5 1023.5038833521498 1023.50278993586 33.433 2 -0.7733781180783665 0.2335050029429076 1.0 ['ENST00000424970.6_1_4:103189051-103189165:-|nuORF'] 56055 11167 LDLAYNLLEGH True H1975_Epitope_Rep1 1256.64010204144 1256.63900993586 47.922 2 -0.7734381297616553 0.2335128454136135 1.0 ['ENSG00000144589|ENST00000456909|STK11IP', 'ENST00000475396.5_1_2:220462865-220474366:+|nuORF', 'ENST00000465230.5_1_2:220470314-220471132:+|nuORF'] 1662 7916 AEGFNQADK True NCI_RA007_Epitope_Rep1 978.4406739588999 978.43956993586 34.785 2 -0.7734407117740976 0.2335128454136135 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 127648 17470 VRELRGLG True NCI_RA007_Epitope_Rep2 898.5348491272598 898.53374993586 72.688 2 -0.7734697937801474 0.23352412342009624 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 57335 7229 LEGSLDWLCY True H1975_Epitope_Rep3 1197.53761111885 1197.53650993586 32.778 2 -0.7736039893180865 0.23360209516522967 1.0 ['RNF213|p.H646Y|1|0.23|ENSG00000173821|chr17:80295737-80295737|C/T|missense_variant'] 74626 12620 NLEERVVLK True PC9_epitope_Rep3 1098.6397081186199 1098.6386099358601 53.566 2 -0.7736312944738403 0.23360209516522967 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 62563 14952 LLTQYFQI True PC9_epitope_Rep2 1024.5593325395998 1024.55822993586 62.772 2 -0.7736441967329382 0.23360209516522967 1.0 ['ENST00000507447.1_1_5:54960464-54965471:-|nuORF'] 65843 9932 LSKPNEHLKVP True H1975_Epitope_Rep1 1260.71902106848 1260.7179299358602 43.139 2 -0.7736663172112103 0.23360649707955097 1.0 ['ENST00000508913.5_1_5:43043449-43044931:+|nuORF'] 30871 6673 GARHRAWL True NCI_RA007_Epitope_Rep4 965.5307668063298 965.5296699358599 32.289 2 -0.7736901979450069 0.23360649707955097 1.0 ['ENST00000265801.6_2_8:20105580-20105898:-|nuORF'] 14431 7883 DTLLEHDHLHL True H1975_Epitope_Rep1 1341.6677137716101 1341.6666099358602 35.274 2 -0.7737260720974621 0.23360649707955097 1.0 ['IGDCC4|p.T872Hfs*22|1|0.15|ENSG00000103742|chr15:65388901-65388902|-/G|frameshift_variant', 'ENSG00000103742|ENST00000352385|IGDCC4'] 12407 7931 DKEYLVLNFNK True NCI_RA007_Epitope_Rep2 1381.7241660185698 1381.7225249037901 35.482 3 -0.7737471306016412 0.23364719729292335 1.0 ['PTEN|p.T319Nfs*6|1|0.37|ENSG00000171862|chr10:87961046-87961047|-/A|frameshift_variant'] 80665 12997 PLPPVPASP True PC9_epitope_Rep1 873.4960040070499 873.49490993586 54.863 2 -0.7738248977483716 0.23365847199540982 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 66669 17716 LSSTPMLFDP True H1975_Epitope_Rep2 1106.53179746242 1106.53127496793 73.466 1 -0.7738666002938801 0.23368445830636145 1.0 ['ENST00000495933.1_1_2:46843792-46844098:-|nuORF'] 18667 13785 ELCLWQNGF True PC9_epitope_Rep5 1108.50116604048 1108.5000699358602 58.043 2 -0.7739118517309063 0.23372515557647888 1.0 ['nc|ENSG00000162496|O75911-2|DHRS3', 'ENST00000482265.1_1_1:12640388-12676590:-|nuORF'] 55995 13502 LDIPMISWVVM True H1975_Epitope_Rep1 1302.67160249386 1302.67050993586 57.055 2 -0.7740258675669631 0.23373299006987863 1.0 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 123221 14904 VHLINVDIT True PC9_epitope_Rep4 1022.5760452329 1022.57494993586 65.269 2 -0.7740470490842313 0.23373299006987863 1.0 ['ENST00000261192.11_1_12:24966871-24966931:-|nuORF'] 13055 5727 DLRETIDFL True NCI_RA007_Epitope_Rep2 1120.57643915572 1120.57534993586 26.893 2 -0.7741092062114505 0.23378495667652294 1.0 ['nc|ENSG00000134369|Q8NEY1-6|NAV1', 'nc|ENSG00000134369|Q8NEY1-7|NAV1', 'nc|ENSG00000134369|Q8NEY1-4|NAV1', 'nc|ENSG00000134369|Q8NEY1-2|NAV1', 'nc|ENSG00000134369|Q8NEY1-3|NAV1', 'nc|ENSG00000134369|Q8NEY1|NAV1', 'ENSG00000134369|ENST00000685211|NAV1', 'ENST00000469130.5_1_1:201751782-201763782:+|nuORF', 'nc|ENSG00000134369|Q8NEY1-5|NAV1'] 99333 22260 SLDQYCEQMWH True PC9_epitope_Rep5 1438.56457122602 1438.5634699358602 90.631 2 -0.7741675039683396 0.23378495667652294 1.0 ['ENSG00000153993|ENST00000284136|SEMA3D'] 1410 9902 AEEGEKKIL True H1975_Epitope_Rep3 1015.5549754351498 1015.55386993586 43.119 2 -0.7741809314033287 0.2338109388331519 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF'] 43469 15906 IHTPTVIAS True PC9_epitope_Rep3 937.5232813840499 937.52218993586 66.331 2 -0.7742410036244234 0.23381877022653721 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 46105 10442 ITAANQTGGLY True H1975_Epitope_Rep2 1107.5560380643099 1107.5549499358601 45.18 2 -0.7742581001248245 0.23381877022653721 1.0 ['ITGAX|p.A1025Cfs*9|1|0.25|ENSG00000140678|chr16:31380275-31380276|-/T|frameshift_variant', 'ENSG00000140678|ENST00000268296|ITGAX', 'ENST00000567409.1_1_16:31366575-31368500:+|nuORF', 'ITGAX|p.G93Pfs*53|1|0.2|ENSG00000140678|chr16:31357055-31357085|CCCTGGGCCTGTCCCTGGCGTCTACCACCAG/-|frameshift_variant'] 76150 13739 NRRRRRDWFWR True H1975_Epitope_Rep3 1702.9141411029796 1702.91304993586 58.144 2 -0.7742642327301141 0.2338300407466792 1.0 ['ENST00000361972.8_1_10:7212945-7217999:-|nuORF'] 24950 20534 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 84.945 2 -0.7742901815396616 0.23384131093524757 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 67628 6795 LTEWLRFYNKW True NCI_RA007_Epitope_Rep3 1554.7983340183396 1554.79669490379 33.834 3 -0.7743207793433242 0.23385258079225688 1.0 ['nc|ENSG00000157800|Q8NCC5-3|SLC37A3', 'nc|ENSG00000157800|Q8NCC5-2|SLC37A3', 'ENSG00000157800|ENST00000326232|SLC37A3', 'ENST00000473707.5_1_7:140051761-140069464:-|nuORF', 'ENST00000464865.5_1_7:140051761-140082350:-|nuORF'] 139738 15156 YTYFCNWGE True H1975_Epitope_Rep2 1181.4487961144498 1181.44714490379 63.453 3 -0.7744167736902243 0.23385697055276086 1.0 ['MTRR|p.G134Wfs*6|2|0.55|ENSG00000124275|chr5:7875291-7875292|-/T|frameshift_variant'] 12688 6023 DLFCVTFTT True PC9_epitope_Rep5 1045.47903361357 1045.4779299358602 28.161 2 -0.7744323757072963 0.23385697055276086 1.0 ['ENST00000569190.1_1_16:19536438-19536558:+|nuORF'] 46102 8164 ITAAINKEFSN True NCI_RA007_Epitope_Rep5 1206.6244519773 1206.62334993586 38.086 2 -0.7744329502540657 0.23385697055276086 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'nc|ENSG00000150471|Q9HAR2-2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2|ADGRL3', 'nc|ENSG00000150471|Q9HAR2-4|ADGRL3'] 127651 16629 VRELRGLG True NCI_RA007_Epitope_Rep3 898.5348491272598 898.53374993586 73.192 2 -0.7744741375954383 0.23389765690499653 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 128659 22839 VSLRKKRLKKF True NCI_RA007_Epitope_Rep5 1401.9296229714098 1401.92797490379 95.062 3 -0.7745323899678015 0.23390204441829682 1.0 ['ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF'] 4703 10199 ALDMTRYWRQL True NCI_RA007_Epitope_Rep1 1451.73435386279 1451.7332499358602 43.684 2 -0.7745921611533626 0.23390204441829682 1.0 ['ENST00000514589.5_1_4:76407750-76415940:-|nuORF', 'ENST00000512567.5_1_4:76407750-76419412:-|nuORF', 'nc|ENSG00000163743|Q96PM5-8|RCHY1', 'nc|ENSG00000163743|Q96PM5-7|RCHY1', 'nc|ENSG00000163743|Q96PM5-6|RCHY1', 'nc|ENSG00000163743|Q96PM5-2|RCHY1', 'ENSG00000163743|ENST00000324439|RCHY1'] 42393 14458 IENNYQHSI True PC9_epitope_Rep3 1116.51998690876 1116.5188899358602 60.718 2 -0.774619806192146 0.23390204441829682 1.0 ['ENSG00000165186|ENST00000379361|PTCHD1', 'nc|ENSG00000165186|Q96NR3-2|PTCHD1'] 112954 10049 TPSATAVPP True H1975_Epitope_Rep2 839.4388830537499 839.43833496793 43.645 1 -0.7746362056800223 0.2339098717496176 1.0 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 19408 12149 ELPGSGKLNK True H1975_Epitope_Rep1 1041.58185888933 1041.5807699358602 51.748 2 -0.7746391454383774 0.2339098717496176 1.0 ['nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'ENSG00000197748|ENST00000357060|CFAP43'] 99409 9652 SLEEKDHI True H1975_Epitope_Rep3 969.4767251144499 969.47562993586 42.143 2 -0.7746666092048731 0.23392113894077332 1.0 ['nc|ENSG00000091831|P03372-3|ESR1', 'nc|ENSG00000091831|P03372-2|ESR1', 'ENSG00000091831|ENST00000206249|ESR1'] 123573 8598 VIIRLDCDVP True H1975_Epitope_Rep1 1141.61653014589 1141.6154299358602 38.002 2 -0.7748364436098162 0.23399905876816282 1.0 ['ENST00000394272.7_1_15:91473956-91474118:-|nuORF'] 44756 17488 IPSELEEPI True PC9_epitope_Rep5 1025.5280919809697 1025.52698993586 72.269 2 -0.7748710910389104 0.23399905876816282 1.0 ['nc|ENSG00000166436|O15016|TRIM66', 'ENSG00000166436|ENST00000646038|TRIM66'] 118270 5567 VCRGEPGGGVE True PC9_epitope_Rep1 1058.4814932250597 1058.48097496793 26.243 1 -0.7748740734645917 0.23399905876816282 1.0 ['ENST00000497613.2_1_8:145667249-145667900:-|nuORF'] 65682 19024 LSHELWKVP True PC9_epitope_Rep1 1107.6076797143498 1107.60658993586 77.966 2 -0.7749406293929251 0.23405100150004413 1.0 ['nc|ENSG00000078687|Q9HCJ0-4|TNRC6C', 'ENSG00000078687|ENST00000696270|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-1|TNRC6C', 'nc|ENSG00000078687|Q9HCJ0-2|TNRC6C', 'ENST00000592566.1_1_17:76094428-76098694:+|nuORF'] 36203 18632 GVFTKRQRK True NCI_RA007_Epitope_Rep5 1118.6672602791398 1118.66667496793 78.482 1 -0.7749501577283776 0.23405100150004413 1.0 ['ENSG00000121053|ENST00000225371|EPX'] 24951 20625 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 85.303 2 -0.7749587198568991 0.23406226562155324 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 55164 14171 LANVAYQSL True PC9_epitope_Rep4 977.51819600361 977.51708993586 62.413 2 -0.7749701936529482 0.23406664509867356 1.0 ['MYO1A|p.T562Dfs*32|1|0.09|ENSG00000166866|chr12:57038489-57038490|-/G|frameshift_variant', 'ENSG00000166866|ENST00000300119|MYO1A'] 128211 25549 VRVGALLL True PC9_epitope_Rep1 839.5592729699499 839.5587249679301 103.28 1 -0.774974379804175 0.23406664509867356 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 73053 6218 NDLALVQLWT True H1975_Epitope_Rep3 1171.62372370131 1171.62262993586 28.93 2 -0.7749787224143695 0.23406664509867356 1.0 ['ENSG00000237412|ENST00000617714|PRSS56', 'ENST00000602410.1_1_2:233387240-233387915:+|nuORF'] 44439 12625 INKDEMEWQVK True H1975_Epitope_Rep3 1418.6864006108601 1418.68530993586 53.767 2 -0.7750268035157202 0.23407790832757377 1.0 ['nc|ENSG00000182177|Q6ZVZ8-2|ASB18', 'ENSG00000182177|ENST00000409749|ASB18'] 115488 13573 TVGDWKNHF True PC9_epitope_Rep5 1102.5195929859399 1102.51848993586 57.232 2 -0.7750852032206546 0.23411858125992588 1.0 ['nc|ENSG00000198203|O00338-2|SULT1C2', 'ENSG00000198203|ENST00000251481|SULT1C2'] 100783 24490 SLRREKWRGRR True PC9_epitope_Rep2 1498.8705449554998 1498.86944993586 99.791 2 -0.7751741291714538 0.23415580978148987 1.0 ['ENST00000300452.7_1_9:131096069-131096330:+|nuORF'] 129823 8037 VTLGENSRKK True H1975_Epitope_Rep1 1130.64077074778 1130.6396699358602 35.858 2 -0.7751795453160237 0.23415580978148987 1.0 ['ENSG00000172123|ENST00000304905|SLFN12'] 65491 11022 LSFLWVESFY True PC9_epitope_Rep4 1289.6332257558502 1289.63158490379 50.172 3 -0.7753911728149676 0.2342337043626579 1.0 ['ENST00000482528.1_1_2:238434384-238436234:+|nuORF'] 140789 1695 YYRWLNYGGV True NCI_RA007_Epitope_Rep3 1289.6193070272097 1289.61766490379 9.622 3 -0.7753959962690452 0.2342337043626579 1.0 ['ENSG00000198056|ENST00000338193|PRIM1', 'ENST00000548173.5_1_12:57140708-57146082:-|nuORF', 'ENST00000546761.5_1_12:57139854-57146049:-|nuORF'] 116987 8303 TYPSEDFDLP True NCI_RA007_Epitope_Rep3 1182.50808481238 1182.50698993586 39.779 2 -0.7754227943854293 0.2342337043626579 1.0 ['ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1', 'ENST00000555607.1_1_14:45431624-45475488:+|nuORF', 'nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1', 'ENST00000555945.1_1_14:45431624-45465140:+|nuORF', 'TOGARAM1|p.F794Lfs*105|1|0.17|ENSG00000198718|chr14:45004102-45004102|T/-|frameshift_variant'] 71093 2750 METDLEVRLR True H1975_Epitope_Rep2 1260.6496211793199 1260.64798490379 14.606 3 -0.7754511563725754 0.23427437141596824 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 7600 17128 ASIGPLTGV True PC9_epitope_Rep6 813.45961849833 813.45852993586 78.466 2 -0.7755128939575385 0.2343003337695373 1.0 ['nc|ENSG00000112659|Q8IWT3-3|CUL9', 'CUL9|p.Q2357Gfs*83|2|0.22|ENSG00000112659|chr6:43222815-43222816|CA/G|frameshift_variant', 'ENSG00000112659|ENST00000252050|CUL9', 'ENST00000451399.5_1_6:43152048-43155921:+|nuORF', 'ENST00000515773.5_1_6:43152048-43164205:+|nuORF'] 84581 7056 QHDKLNLGPAI True H1975_Epitope_Rep2 1204.6564208119198 1204.6553299358602 32.067 2 -0.7756392302394512 0.23432721712538226 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 57010 15757 LEEEKKKKSWD True H1975_Epitope_Rep3 1418.7405443586997 1418.7394499358602 66.053 2 -0.7756493412086441 0.23432721712538226 1.0 ['ENSG00000157601|ENST00000398598|MX1'] 133228 15646 WEDIKWLRRLK True H1975_Epitope_Rep1 1541.8830667018099 1541.88196993586 65.471 2 -0.775661046911738 0.23432721712538226 1.0 ['HAO1|p.T229K|2|0.28|ENSG00000101323|chr20:7906189-7906189|G/T|missense_variant'] 128726 7136 VSPPASPSP True H1975_Epitope_Rep2 837.42323298961 837.4226849679301 32.381 1 -0.7756680595837641 0.23432721712538226 1.0 ['ENST00000355243.7_1_10:102587940-102588264:+|nuORF'] 119574 19033 VERKLAHRK True NCI_RA007_Epitope_Rep1 1135.6938093801498 1135.69327496793 78.175 1 -0.7756759878128457 0.23432721712538226 1.0 ['nc|ENSG00000186583|Q76KD6-2|SPATC1', 'ENSG00000186583|ENST00000377470|SPATC1'] 4655 11997 ALCHHLPV True PC9_epitope_Rep1 888.4639926861199 888.46288993586 51.009 2 -0.7757188271426931 0.23434973095357112 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 52108 20783 KLPVFYSEF True PC9_epitope_Rep3 1128.58554728744 1128.5844499358602 85.214 2 -0.7757256337072189 0.23434973095357112 1.0 ['ENST00000350796.7_1_7:6204053-6204119:-|nuORF'] 97108 14687 SFDLYTPER True H1975_Epitope_Rep1 1126.5294889632999 1126.52838993586 61.71 2 -0.7758260688417863 0.23441979446919242 1.0 ['TECPR1|p.A682D|1|0.33|ENSG00000205356|chr7:98231303-98231303|G/T|missense_variant'] 83360 12276 QAQKHFHYQQL True NCI_RA007_Epitope_Rep2 1426.7105816430999 1426.7094899358601 52.353 2 -0.775884353969366 0.23444575124963246 1.0 ['SLF1|p.E944Q|1|0.27|ENSG00000133302|chr5:94694965-94694965|G/C|missense_variant'] 67842 13656 LTISGYLRPA True PC9_epitope_Rep4 1089.61824439805 1089.6171499358602 60.419 2 -0.7759581718596174 0.2344501124619614 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-3|ZZEF1', 'ENST00000574474.1_1_17:3979912-4046255:-|nuORF'] 120998 11176 VGEVSILV True NCI_RA007_Epitope_Rep2 814.4800195897399 814.47892993586 48.052 2 -0.7759613384504501 0.2344501124619614 1.0 ['RDH10|p.V141I|2|0.15|ENSG00000121039|chr8:73297325-73297325|G/A|missense_variant'] 111008 8543 TLDHVIATHQS True PC9_epitope_Rep3 1220.6149499227602 1220.61331490379 37.816 3 -0.7759665092134336 0.2344501124619614 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555226.1_1_14:81862181-81864726:-|nuORF'] 64908 19312 LSAWKISLTSR True PC9_epitope_Rep5 1260.7190210684798 1260.7179299358602 79.33 2 -0.7759983846383515 0.2344726203601617 1.0 ['ENST00000464003.1_1_2:206547990-206565476:+|nuORF'] 60009 25026 LHRFGRGL True H1975_Epitope_Rep1 954.5511678977398 954.55006993586 103.64 2 -0.7760029499855707 0.2344726203601617 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF'] 10399 23023 CLCSAAPT True H1975_Epitope_Rep3 764.3196965212001 764.31858993586 96.167 2 -0.7760189531280905 0.23450384372289917 1.0 ['ENST00000483032.1_1_1:155726496-155726922:-|nuORF'] 57453 15488 LEIPYQKNI True PC9_epitope_Rep2 1116.61791004488 1116.6168099358601 64.849 2 -0.7760218996194854 0.23450384372289917 1.0 ['ENSG00000165953|ENST00000677451|SERPINA12'] 48308 13791 KDNVYRKRRK True H1975_Epitope_Rep1 1361.8003997070098 1361.79930993586 58.19 2 -0.7760499104747953 0.23450384372289917 1.0 ['ENSG00000129167|ENST00000682019|TPH1', 'nc|ENSG00000129167|P17752-2|TPH1'] 68534 10012 LTVVPQGQQG True PC9_epitope_Rep5 1025.5505587610498 1025.54946993586 43.488 2 -0.7760554748447483 0.23450384372289917 1.0 ['nc|ENSG00000068079|P80217-2|IFI35', 'ENSG00000068079|ENST00000415816|IFI35'] 63248 8161 LPAGRLHPA True NCI_RA007_Epitope_Rep3 930.5399345077 930.53882993586 39.219 2 -0.7760629345411453 0.23450384372289917 1.0 ['ENST00000447098.6_1_1:45291946-45292617:-|nuORF'] 64271 20561 LQLKEKKREKT True H1975_Epitope_Rep3 1399.8510978671898 1399.84945490379 85.939 3 -0.7760852459530745 0.23450384372289917 1.0 ['nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 30367 7071 GAENPRPFSP True NCI_RA007_Epitope_Rep4 1070.5145076055 1070.5134099358602 33.822 2 -0.776090725707316 0.23450384372289917 1.0 ['ENSG00000171992|ENST00000307662|SYNPO'] 3381 7545 AGITAAPGKQA True H1975_Epitope_Rep3 983.5399940773499 983.53888993586 34.004 2 -0.7760923200027506 0.23450384372289917 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 68889 20911 LVENIPEVLN True PC9_epitope_Rep2 1138.6233893481399 1138.6222899358602 85.881 2 -0.7761301442293624 0.23452634673329903 1.0 ['PLD5|p.G119V|2|0.2|ENSG00000180287|chr1:242288501-242288501|C/A|missense_variant'] 122105 16050 VGRFQERLPK True NCI_RA007_Epitope_Rep1 1228.70403971068 1228.70239490379 66.534 3 -0.7761387313691643 0.23452634673329903 1.0 ['ENSG00000179041|ENST00000320270|RRS1'] 38313 24361 HFRRGRRRSLA True PC9_epitope_Rep2 1410.8181154598199 1410.8170099358601 99.268 2 -0.7761885012412234 0.2345713487852555 1.0 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 127649 17654 VRELRGLG True NCI_RA007_Epitope_Rep2 898.5348491272598 898.53374993586 73.409 2 -0.7761957033468778 0.2345713487852555 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 78363 17110 PATSCLRCPLS True PC9_epitope_Rep2 1146.55254999034 1146.55144993586 71.063 2 -0.7762038189817662 0.2345713487852555 1.0 ['ENST00000278407.8_1_11:57382057-57382189:+|nuORF'] 117376 15104 VAAYSASLEDV True NCI_RA007_Epitope_Rep4 1123.5397192938299 1123.5386299358602 65.661 2 -0.776204240174873 0.2345713487852555 1.0 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 128212 25721 VRVGALLL True PC9_epitope_Rep1 839.5592729699499 839.5587249679301 103.98 1 -0.7762815776311762 0.23459040004702977 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 118532 11314 VDTTAGSSHDP True H1975_Epitope_Rep3 1085.46253160229 1085.46142993586 48.625 2 -0.7763015539969236 0.23459040004702977 1.0 ['ENST00000560873.1_1_15:81201974-81241127:-|nuORF'] 94234 8812 RWRFYWKMVYE True NCI_RA007_Epitope_Rep1 1662.8129385366599 1662.8113049037902 38.278 3 -0.7763137204087683 0.23459040004702977 1.0 ['XKR4|p.I597Mfs*25|1|0.35|ENSG00000206579|chr8:55524064-55524064|T/-|frameshift_variant', 'ENSG00000206579|ENST00000327381|XKR4'] 79519 11792 PGQWIIC[Carbamidomethyl]VEGD True NCI_RA007_Epitope_Rep1 1272.5808731925897 1272.5797699358602 49.846 2 -0.7763467960435751 0.234601648957277 1.0 ['nc|ENSG00000131373|Q9UJ83-3|HACL1', 'nc|ENSG00000131373|Q9UJ83-4|HACL1', 'nc|ENSG00000131373|Q9UJ83-2|HACL1', 'ENSG00000131373|ENST00000321169|HACL1'] 25021 20022 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 82.418 2 -0.7763874046819678 0.2346128975368879 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57392 15983 LEHRGTLRTQ True H1975_Epitope_Rep3 1209.65781779425 1209.65617490379 66.936 3 -0.776423643672358 0.2346535380997869 1.0 ['ENSG00000101493|ENST00000443185|ZNF516'] 127653 17334 VRELRGLG True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 73.449 2 -0.7765018189933595 0.23465444018280945 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 134380 13860 WSPNWFWRRPV True H1975_Epitope_Rep3 1529.76803694957 1529.76640490379 58.621 3 -0.7765357816820363 0.23465444018280945 1.0 ['nc|ENSG00000204544|Q5SSG8-3|MUC21', 'ENSG00000204544|ENST00000376296|MUC21', 'nc|ENSG00000204544|Q5SSG8-2|MUC21'] 128059 16465 VRRLPGGG True H1975_Epitope_Rep2 810.4824196315798 810.48132993586 68.552 2 -0.7765459404074543 0.23465444018280945 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 136323 6854 YHAADLSL True PC9_epitope_Rep6 888.43413202648 888.43302993586 35.24 2 -0.7765958874176643 0.23465444018280945 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 122914 10490 VGVSSSTSV True PC9_epitope_Rep3 821.41306222873 821.41196993586 45.289 2 -0.7766454509478596 0.23468038207200587 1.0 ['ENSG00000112837|ENST00000369663|TBX18'] 59185 12678 LGFQKRWRK True PC9_epitope_Rep2 1217.71454482473 1217.7134499358601 54.074 2 -0.7766782631599795 0.23469162833757035 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 57266 13163 LEGAVGNEESL True PC9_epitope_Rep1 1116.52988288612 1116.52878993586 55.497 2 -0.7766967835141882 0.23469597672436596 1.0 ['ENSG00000166450|ENST00000389286|PRTG'] 13688 14451 DQFDERRY True H1975_Epitope_Rep1 1127.49958581735 1127.49848993586 60.783 2 -0.7767105195350732 0.23469597672436596 1.0 ['nc|ENSG00000158089|Q96FL9-2|GALNT14', 'nc|ENSG00000158089|Q96FL9-4|GALNT14', 'ENSG00000158089|ENST00000349752|GALNT14', 'ENST00000464038.5_1_2:31155024-31369832:-|nuORF', 'ENST00000455477.5_1_2:31155024-31348064:-|nuORF'] 3 5311 AAAAAAAAAAA True PC9_epitope_Rep2 799.41881631551 799.41770993586 25.818 2 -0.776717951191688 0.23469597672436596 1.0 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 134672 5140 WWNRMSNRFRK True NCI_RA007_Epitope_Rep3 1579.7942687807497 1579.79263490379 27.211 3 -0.7767881290960933 0.23470377336311274 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 129793 22900 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 95.67 2 -0.7768016352821071 0.23470377336311274 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 129792 22815 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 95.326 2 -0.7768736301346221 0.23474440542486444 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 30408 19921 GAFIAGVP True PC9_epitope_Rep1 730.4013753462199 730.40082496793 81.444 1 -0.7769237037095433 0.2347522002968013 1.0 ['ENSG00000176454|ENST00000314891|LPCAT4'] 111106 16809 TLEIMPCPML True PC9_epitope_Rep1 1146.54871047986 1146.54760993586 69.481 2 -0.7769337539218013 0.2347522002968013 1.0 ['nc|ENSG00000185019|O94941-2|UBOX5', 'ENSG00000185019|ENST00000217173|UBOX5'] 43606 8601 IIIKMEPEDIP True NCI_RA007_Epitope_Rep1 1296.69992541668 1296.6988299358602 37.457 2 -0.7770173412284581 0.23478938011489692 1.0 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 115188 5060 TVARSPVAP True PC9_epitope_Rep6 896.5079656730799 896.50686993586 27.106 2 -0.7770256945573838 0.23478938011489692 1.0 ['ENSG00000197063|ENST00000357736|MAFG'] 100646 7490 SLQSNPLLPD True H1975_Epitope_Rep3 1082.5607890915799 1082.5596899358602 33.791 2 -0.7770533821312997 0.23480151617547673 1.0 ['ENSG00000143013|ENST00000370544|LMO4'] 55004 18688 LAKIRDSLAI True PC9_epitope_Rep6 1098.67609362734 1098.6749899358601 84.527 2 -0.7770601311130453 0.23480151617547673 1.0 ['RALGAPA2|p.N971S|1|0.54|ENSG00000188559|chr20:20571936-20571936|T/C|missense_variant'] 84905 14345 QHSRRAPEVWK True NCI_RA007_Epitope_Rep3 1392.73746509728 1392.73636993586 63.741 2 -0.7770771342501276 0.23480151617547673 1.0 ['ENST00000322177.5_1_15:75247781-75248108:-|nuORF'] 42044 16801 IEEATWHQL True PC9_epitope_Rep2 1125.54547338061 1125.54436993586 69.871 2 -0.7770826071505067 0.23480151617547673 1.0 ['ENST00000392914.3_1_12:102517666-102545686:+|nuORF'] 10568 6096 CQSYIWIGEEY True H1975_Epitope_Rep3 1389.5911032436898 1389.58945490379 28.46 3 -0.777090817320646 0.23480151617547673 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 56662 5707 LEAAGDKF True PC9_epitope_Rep6 849.42323298961 849.42212993586 30.083 2 -0.7771094877760525 0.23481275801783535 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 49091 10345 KFYMWFYFFIK True NCI_RA007_Epitope_Rep2 1618.8046652687397 1618.80301490379 44.829 3 -0.7771410380566559 0.23482054973629699 1.0 ['ENST00000498257.5_1_6:129811877-129812174:+|nuORF'] 41793 16443 IDRRYAWI True H1975_Epitope_Rep2 1091.58761297611 1091.58650993586 68.467 2 -0.7771515588768335 0.23482054973629699 1.0 ['ENSG00000141252|ENST00000437048|VPS53', 'nc|ENSG00000141252|Q5VIR6-1|VPS53', 'nc|ENSG00000141252|Q5VIR6-3|VPS53', 'ENST00000576149.5_1_17:503295-579448:-|nuORF', 'nc|ENSG00000141252|Q5VIR6-2|VPS53'] 23569 14588 EYDAVAEKAGK True H1975_Epitope_Rep3 1179.57716743171 1179.57606993586 61.481 2 -0.7771989694755991 0.23484648156309681 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 19918 16573 ELYDYYYYEYL True H1975_Epitope_Rep3 1595.67079303303 1595.66968993586 69.246 2 -0.7772718150013901 0.23485082191177117 1.0 ['COL24A1|p.D477Y|1|0.27|ENSG00000171502|chr1:86124907-86124907|C/A|missense_variant'] 277 11494 AAGTDCSFP True PC9_epitope_Rep2 867.34326841675 867.3421699358599 49.535 2 -0.777306567213804 0.23485082191177117 1.0 ['chr1:59653519-59660219|387|26.66|0.05|9.04|+|1|TE_info:L1PA2,L1PA2_dup41,L1,LINE,donor,-,59647748,59653519|None,FGGY|92'] 918 6612 ADRPTVPP True H1975_Epitope_Rep2 851.4501164437899 851.44900993586 30.341 2 -0.7773379828467523 0.23485082191177117 1.0 ['ENST00000428809.5_1_21:15399915-15456441:+|nuORF'] 42759 8575 IFFNNSFAL True PC9_epitope_Rep6 1071.53893144819 1071.5378299358601 42.766 2 -0.7773894021423399 0.23486206187384318 1.0 ['ENSG00000176769|ENST00000368642|TCERG1L'] 128214 25606 VRVGALLL True PC9_epitope_Rep3 839.5592729699499 839.5587249679301 103.99 1 -0.7774128070614632 0.23487507894775494 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 81000 17962 PNQDKKKKKKE True NCI_RA007_Epitope_Rep4 1369.80414767477 1369.8030499358601 77.711 2 -0.7774241809445479 0.23487507894775494 1.0 ['ENST00000360264.7_1_7:101893260-101893380:+|nuORF'] 66761 15028 LSTWYTEL True PC9_epitope_Rep1 1011.49131254943 1011.49020993586 62.625 2 -0.7774699028734644 0.23487507894775494 1.0 ['ENST00000464678.5_1_22:51208306-51220722:-|nuORF', 'nc|ENSG00000144134|Q9UNT1|RABL2B', 'ENSG00000079974|ENST00000691320|RABL2B', 'nc|ENSG00000144134|Q9UNT1-3|RABL2B', 'ENST00000477218.1_1_2:114392665-114398608:+|nuORF', 'nc|ENSG00000144134|Q9UBK7|RABL2A', 'ENSG00000144134|ENST00000683472|RABL2A', 'nc|ENSG00000144134|Q9UBK7-3|RABL2A', 'ENST00000494909.5_1_2:114398284-114398608:+|nuORF'] 69086 10622 LVKANQNLVP True NCI_RA007_Epitope_Rep2 1094.64479349906 1094.64368993586 45.916 2 -0.7774832019810233 0.23487507894775494 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4'] 44783 20462 IPTPASLLQ True PC9_epitope_Rep1 938.54368247546 938.5431349679301 83.519 1 -0.777499386332475 0.23487507894775494 1.0 ['ENST00000479835.1_1_7:75362785-75368238:-|nuORF'] 93503 9290 RSKTDLDCIF True PC9_epitope_Rep6 1196.5859582935998 1196.58430490379 45.897 3 -0.7775148248259128 0.23487507894775494 1.0 ['ENSG00000254093|ENST00000314787|PINX1', 'ENST00000524061.1_1_8:10645233-10677771:-|nuORF'] 58059 22985 LERLYQRYFF True PC9_epitope_Rep5 1433.7455701694896 1433.74446993586 93.402 2 -0.7775244567330557 0.23487507894775494 1.0 ['ENSG00000173175|ENST00000462833|ADCY5', 'ADCY5|p.P819Hfs*14|1|0.34|ENSG00000173175|chr3:123304170-123304170|G/-|frameshift_variant', 'ADCY5|p.E424Rfs*21|1|0.34|ENSG00000173175|chr3:123352446-123352446|C/-|frameshift_variant', 'nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6'] 88159 22916 QWRRRRHRHLA True PC9_epitope_Rep6 1570.8930117355799 1570.89136490379 101.25 3 -0.7775436049878645 0.23487507894775494 1.0 ['ENST00000589935.1_1_18:54318575-54318788:+|nuORF'] 71537 9625 MKYKKKCVK True PC9_epitope_Rep5 1154.66679189694 1154.6651549037902 41.988 3 -0.7775599842630837 0.23487507894775494 1.0 ['nc|ENSG00000056736|Q9NRM6-2|IL17RB', 'ENST00000475124.1_1_3:53880615-53891834:+|nuORF', 'ENSG00000056736|ENST00000288167|IL17RB'] 99442 14923 SLEIVPVGTV True PC9_epitope_Rep4 1012.580461907 1012.57936993586 65.342 2 -0.7776074239222831 0.23487941720764915 1.0 ['ENSG00000006025|ENST00000007414|OSBPL7', 'ENST00000579728.5_1_17:45885659-45892067:-|nuORF', 'ENST00000583167.5_1_17:45885659-45892067:-|nuORF'] 77790 8327 PAEAIKEHERW True PC9_epitope_Rep4 1364.68369818892 1364.68260993586 39.488 2 -0.7776097475530928 0.23487941720764915 1.0 ['ENSG00000174945|ENST00000683327|AMZ1'] 82942 12797 PWNMKICEMVD True PC9_epitope_Rep4 1364.5927005501599 1364.59160993586 57.085 2 -0.7776153591369867 0.23487941720764915 1.0 ['nc|ENSG00000160352|Q96N38-2|ZNF714', 'nc|ENSG00000160352|Q96N38|ZNF714', 'ENSG00000160352|ENST00000456283|ZNF714'] 81362 16847 PPSLGLLQRER True NCI_RA007_Epitope_Rep4 1264.7251690780797 1264.7240699358601 72.999 2 -0.7777068250382126 0.23491312840546932 1.0 ['ENST00000562955.2_2_1:43919018-43919642:+|nuORF'] 44054 21219 ILLFRRPLPK True PC9_epitope_Rep6 1251.8179472641098 1251.81631490379 94.466 3 -0.7777155706391224 0.23491312840546932 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 127332 6002 VQNLQQHNLI True H1975_Epitope_Rep3 1205.65166978465 1205.6505699358602 28.099 2 -0.7777468061106209 0.23491312840546932 1.0 ['KLHL4|p.P628Lfs*29|1|0.29|ENSG00000102271|chrX:87635730-87635730|C/-|frameshift_variant', 'ENSG00000102271|ENST00000373119|KLHL4', 'nc|ENSG00000102271|Q9C0H6-2|KLHL4'] 83472 11209 QDFLCMFSL True PC9_epitope_Rep5 1102.48273909502 1102.48164993586 48.103 2 -0.7778408290891072 0.23493215061974976 1.0 ['ENST00000313349.3_1_2:64861451-64861622:-|nuORF'] 83961 13255 QELKWQKETLQ True NCI_RA007_Epitope_Rep2 1429.7565287760099 1429.75542993586 56.192 2 -0.7778550998369959 0.23493215061974976 1.0 ['nc|ENSG00000186714|Q6ZRK6-2|CCDC73', 'ENSG00000186714|ENST00000335185|CCDC73'] 108240 6026 TEAIQLLENTA True H1975_Epitope_Rep2 1201.6190322436898 1201.61792993586 28.157 2 -0.7778595599697068 0.23493215061974976 1.0 ['MUC16|p.S8935L|1|0.29|ENSG00000181143|chr19:8949966-8949966|G/A|missense_variant'] 221 19554 AAFTAFEEA True PC9_epitope_Rep3 955.4287122928698 955.42760993586 80.449 2 -0.7778652707786466 0.23494338625115652 1.0 ['ENSG00000007080|ENST00000445755|CCDC124'] 83546 9924 QDNENVVNEY True H1975_Epitope_Rep2 1222.5102100707 1222.5096749679299 43.161 1 -0.7779310166472688 0.2349546215525597 1.0 ['CON__P02676'] 92732 24459 RRKKRFAK True NCI_RA007_Epitope_Rep3 1088.7043144941997 1088.70377496793 105.85 1 -0.777961507755611 0.23497019002026492 1.0 ['ENSG00000271447|ENST00000605424|MMP28', 'nc|ENSG00000271447|Q9H239-2|MMP28', 'MMP28|p.K116N|1|0.48|ENSG00000271447|chr17:35778919-35778919|T/G|missense_variant'] 135662 6262 YEFYHYVKEQF True H1975_Epitope_Rep1 1551.7034305739896 1551.70232993586 29.157 2 -0.7779648787559942 0.23497019002026492 1.0 ['ENST00000466695.1_1_6:149387353-149395249:+|nuORF', 'ENSG00000111962|ENST00000367463|UST'] 30655 18962 GALGDLHLTTL True PC9_epitope_Rep2 1109.60807363717 1109.6069699358602 78.3 2 -0.7779665010407255 0.23497019002026492 1.0 ['FOXN1|p.Y617Tfs*59|2|0.28|ENSG00000109101|chr17:28537337-28537337|C/-|frameshift_variant', 'ENSG00000109101|ENST00000579795|FOXN1'] 118317 19175 VDEFWWFPHMW True PC9_epitope_Rep4 1578.6754420043399 1578.6737849037902 81.854 3 -0.7779867732761999 0.23497019002026492 1.0 ['ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 70601 10339 LYYYRDRDWRW True NCI_RA007_Epitope_Rep2 1690.8004592766597 1690.79936993586 44.806 2 -0.7779984524927402 0.23497107280256085 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 71927 9698 MPSERCLSI True PC9_epitope_Rep2 1034.4888871046198 1034.48778993586 42.643 2 -0.7780082931361314 0.23497107280256085 1.0 ['KLHL32|p.R299Afs*16|1|0.2|ENSG00000186231|chr6:97114043-97114044|-/A|frameshift_variant', 'nc|ENSG00000186231|Q96NJ5-3|KLHL32', 'nc|ENSG00000186231|Q96NJ5-2|KLHL32', 'ENSG00000186231|ENST00000369261|KLHL32', 'KLHL32|p.G119Afs*21|1|0.28|ENSG00000186231|chr6:97064669-97064669|G/-|frameshift_variant'] 59684 23203 LGTLLGNLL True PC9_epitope_Rep3 912.56441792004 912.56332993586 94.523 2 -0.7781385981332789 0.23497107280256085 1.0 ['ENSG00000279514|ENST00000623907|OR4C16'] 4173 11736 AIARKLLLM True NCI_RA007_Epitope_Rep2 1027.65760711223 1027.6565099358602 50.247 2 -0.7781855348147504 0.23497107280256085 1.0 ['ENSG00000204361|ENST00000389586|NXPE2', 'nc|ENSG00000204361|Q96DL1-3|NXPE2'] 120642 20669 VGAKQKKWKP True PC9_epitope_Rep3 1168.7080624619598 1168.7069699358601 84.776 2 -0.7782096994744268 0.23498230621264848 1.0 ['ENSG00000158292|ENST00000377893|GPR153'] 94578 24015 RYIRLRFQRIR True PC9_epitope_Rep1 1575.9586316839097 1575.95698490379 97.182 3 -0.77822358595542 0.2349866384753179 1.0 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.V2037Lfs*29|1|0.2|ENSG00000196569|chr6:129440839-129440839|G/-|frameshift_variant', 'LAMA2|p.R1029Hfs*46|1|0.17|ENSG00000196569|chr6:129300784-129300784|G/-|frameshift_variant', 'LAMA2|p.V425Sfs*27|1|0.09|ENSG00000196569|chr6:129165640-129165640|A/-|frameshift_variant', 'LAMA2|p.E614Gfs*16|1|0.25|ENSG00000196569|chr6:129250170-129250171|AA/-|frameshift_variant'] 112781 7758 TPLHTAAHFG True PC9_epitope_Rep4 1050.52467836638 1050.5235899358602 37.232 2 -0.7782248807513802 0.2349866384753179 1.0 ['nc|ENSG00000005981|Q9Y574-2|ASB4', 'ENSG00000005981|ENST00000325885|ASB4'] 36019 9660 GVDFLQLP True H1975_Epitope_Rep2 887.4752685624699 887.47416993586 42.138 2 -0.7782706497158489 0.2349866384753179 1.0 ['GMIP|p.R558S|1|0.22|ENSG00000089639|chr19:19635100-19635100|C/G|missense_variant', 'nc|ENSG00000089639|Q9P107-2|GMIP', 'ENSG00000089639|ENST00000203556|GMIP'] 16955 10680 EGGGLTLPP True NCI_RA007_Epitope_Rep1 839.4388830537499 839.43833496793 45.534 1 -0.778312921351866 0.2349978709971075 1.0 ['FMN2|p.V754G|1|0.29|ENSG00000155816|chr1:240207073-240207073|T/G|missense_variant'] 128235 26197 VRVRRVGRA True H1975_Epitope_Rep1 1067.6788280223498 1067.6782749679298 108.8 1 -0.778391892947885 0.23505315087801726 1.0 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF'] 28287 11902 FRWIRCLFWDK True NCI_RA007_Epitope_Rep1 1568.8074592333999 1568.80582490379 50.28 3 -0.778432648686039 0.23507561297900456 1.0 ['PKD1L1|p.Q1687R|1|0.34|ENSG00000158683|chr7:47846972-47846972|T/C|missense_variant'] 51893 24867 KKRLKKKVARA True NCI_RA007_Epitope_Rep3 1324.91430726044 1324.91320993586 107.52 2 -0.7784437730858143 0.23507561297900456 1.0 ['ENST00000489152.5_1_2:74717680-74718064:+|nuORF', 'ENST00000449459.5_1_2:74710449-74718064:+|nuORF'] 19787 9156 ELTHNNKTV True PC9_epitope_Rep3 1054.54072235334 1054.5396299358601 40.159 2 -0.7785298866552713 0.2351162073673856 1.0 ['ENSG00000156162|ENST00000414645|DPY19L4'] 90614 25580 RKKKKKHH True NCI_RA007_Epitope_Rep1 1088.7043144942 1088.70377496793 105.87 1 -0.778553354230119 0.2351421188630491 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 86662 16378 QRGQGRGP True NCI_RA007_Epitope_Rep1 854.4470967520198 854.44598993586 67.82 2 -0.7785564091760249 0.2351533481126951 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 84944 23272 QHWLLRWGR True PC9_epitope_Rep5 1250.67849366918 1250.67685490379 94.502 3 -0.778731227918441 0.23531138972898377 1.0 ['ENST00000003912.7_2_1:24798759-24798915:+|nuORF'] 65216 5220 LSEAMCFLAPD True H1975_Epitope_Rep2 1195.5253321829898 1195.5242299358601 25.146 2 -0.7788173940080859 0.23533384226907042 1.0 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3', 'ENST00000520482.1_1_8:142168222-142185717:+|nuORF'] 31958 11636 GESPKERHPDS True NCI_RA007_Epitope_Rep1 1237.56872800633 1237.5676299358602 49.233 2 -0.778818483402633 0.23533384226907042 1.0 ['ENSG00000127903|ENST00000537055|ZNF835'] 13375 7068 DNENSPEIPV True NCI_RA007_Epitope_Rep1 1112.49858275784 1112.4974899358601 31.487 2 -0.7788466355696363 0.23534506804468783 1.0 ['ENSG00000076356|ENST00000367033|PLXNA2'] 99263 5524 SLDDIQQAINR True PC9_epitope_Rep1 1271.64697832703 1271.64532490379 26.078 3 -0.7788878840345609 0.23538391533459568 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.N1473Ifs*15|1|0.19|ENSG00000124721|chr6:38848664-38848664|A/-|frameshift_variant', 'DNAH8|p.S2130Vfs*12|1|0.21|ENSG00000124721|chr6:38872578-38872578|G/-|frameshift_variant'] 59859 11943 LHGELVEDIP True H1975_Epitope_Rep2 1120.57643915572 1120.57534993586 51.017 2 -0.7789259690012107 0.23538391533459568 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 78626 10537 PDTRVHCCL True PC9_epitope_Rep5 1042.46882036638 1042.46772993586 45.519 2 -0.7789292142635669 0.23538391533459568 1.0 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-4|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-9|SEPTIN9', 'ENST00000592481.5_1_17:75447336-75492345:+|nuORF', 'nc|ENSG00000184640|Q9UHD8-3|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-8|SEPTIN9', 'nc|ENSG00000100167|Q9UH03-2|SEPTIN3', 'nc|ENSG00000100167|Q9UH03|SEPTIN3', 'ENSG00000100167|ENST00000644076|SEPTIN3'] 43559 15198 IIEKPPLGT True PC9_epitope_Rep1 966.5749826037398 966.57388993586 63.279 2 -0.7789541982975448 0.23538391533459568 1.0 ['SASH3|p.V210L|1|0.32|ENSG00000122122|chrX:129792663-129792663|G/T|missense_variant'] 140056 27633 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 114.17 3 -0.778972834364468 0.23538391533459568 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 23318 13112 EVSSRLLLAP True PC9_epitope_Rep1 1083.62880908175 1083.6277099358601 55.302 2 -0.7790247416485262 0.23538391533459568 1.0 ['ENSG00000124134|ENST00000537075|KCNS1'] 124539 12867 VLGDEVIG True PC9_epitope_Rep2 800.4279840168799 800.42688993586 54.793 2 -0.7790422818477594 0.23538391533459568 1.0 ['ENSG00000214595|ENST00000356458|EML6'] 125293 10713 VLRSFRLL True NCI_RA007_Epitope_Rep4 1002.6338348925399 1002.63272993586 48.054 2 -0.7790434050009577 0.23538391533459568 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN10A|p.R762S|1|0.32|ENSG00000185313|chr3:38728898-38728898|G/T|missense_variant', 'SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'SCN9A|p.L1226Rfs*18|1|0.19|ENSG00000169432|chr2:166238218-166238218|A/-|frameshift_variant', 'ENSG00000185313|ENST00000449082|SCN10A', 'SCN4A|p.F677L|1|0.42|ENSG00000007314|chr17:63957509-63957509|A/G|missense_variant'] 16702 10448 EEVPFQALK True H1975_Epitope_Rep1 1059.5600608155898 1059.5589699358602 45.142 2 -0.7790484338629754 0.23538391533459568 1.0 ['ENST00000461491.5_1_3:25819310-25825562:-|nuORF', 'ENST00000474611.1_1_3:25819310-25824959:-|nuORF'] 69707 13956 LVYRKGIDLL True NCI_RA007_Epitope_Rep4 1188.7230438197598 1188.72194993586 60.959 2 -0.7790693182714968 0.23538391533459568 1.0 ['ENSG00000165195|ENST00000333590|PIGA'] 54930 19862 LAGSLGAPL True PC9_epitope_Rep2 797.46470387877 797.4641549679301 81.791 1 -0.7790854485259407 0.23538477345114558 1.0 ['ENST00000336798.11_2_1:31344561-31344780:-|nuORF'] 121262 4389 VGGVEREQRGV True NCI_RA007_Epitope_Rep3 1184.6261833127999 1184.6245349037902 24.039 3 -0.7791001002994321 0.23538477345114558 1.0 ['ENST00000536214.1_2_17:656373-656511:+|nuORF'] 104358 7536 SSFLLQGRTA True NCI_RA007_Epitope_Rep4 1078.5771078620598 1078.5760099358602 35.633 2 -0.7791082344762317 0.23538477345114558 1.0 ['nc|ENSG00000145113|Q99102-3|MUC4', 'ENSG00000145113|ENST00000463781|MUC4', 'nc|ENSG00000145113|Q99102-10|MUC4', 'nc|ENSG00000145113|Q99102-12|MUC4', 'nc|ENSG00000145113|Q99102-13|MUC4'] 4792 13154 ALEKYYLSIF True NCI_RA007_Epitope_Rep1 1245.6645258841297 1245.6634299358602 55.162 2 -0.7791472424493162 0.23538477345114558 1.0 ['ENSG00000198829|ENST00000362032|SUCNR1'] 43750 10531 IIVENFSLFY True PC9_epitope_Rep3 1243.6488758199898 1243.64722490379 45.447 3 -0.7792163988334784 0.23542535078964363 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 60770 7891 LKERLTKI True H1975_Epitope_Rep2 999.6440652230699 999.64296993586 35.299 2 -0.7792276223086839 0.23543657258597156 1.0 ['ENSG00000154359|ENST00000398246|LONRF1', 'nc|ENSG00000154359|Q17RB8-2|LONRF1'] 16457 4779 EELRELAESWR True H1975_Epitope_Rep3 1416.6997421758797 1416.6986499358602 23.508 2 -0.7793092324837856 0.2354849125278854 1.0 ['nc|ENSG00000176438|Q6ZMZ3-2|SYNE3', 'ENSG00000176438|ENST00000682763|SYNE3', 'ENST00000555759.1_1_14:95904955-95916441:-|nuORF'] 12629 7348 DLEEKVTR True NCI_RA007_Epitope_Rep5 988.5189242795999 988.51782993586 34.942 2 -0.7793153693035195 0.2354849125278854 1.0 ['ENSG00000198515|ENST00000514170|CNGA1'] 100339 4486 SLMPQPHPA True NCI_RA007_Epitope_Rep5 976.48003667308 976.47892993586 23.905 2 -0.7793405065658006 0.2354849125278854 1.0 ['ENST00000602034.1_1_19:39408732-39410638:-|nuORF'] 15025 8645 EAAAAGAF True H1975_Epitope_Rep1 706.32860432878 706.32805496793 38.182 1 -0.7793593861626903 0.2355073527253515 1.0 ['nc|ENSG00000215912|A8MYJ7|TTC34', 'ENSG00000215912|ENST00000401095|TTC34'] 68004 13231 LTLYQSNTIL True PC9_epitope_Rep2 1164.63903941228 1164.63739490379 56.171 3 -0.7793662488340668 0.2355073527253515 1.0 ['ENSG00000084207|ENST00000398606|GSTP1', 'ENST00000489040.1_1_11:67351618-67352251:+|nuORF', 'GSTP1|p.G74Afs*20|1|0.12|ENSG00000084207|chr11:67584759-67584759|G/-|frameshift_variant', 'ENST00000494593.1_1_11:67352122-67352251:+|nuORF'] 59077 5203 LGDRSKEYIRK True NCI_RA007_Epitope_Rep3 1363.7571974823497 1363.75555490379 27.464 3 -0.7793882890332505 0.23552979160551804 1.0 ['ENSG00000163376|ENST00000417314|KBTBD8'] 8537 17291 ATWTMATL True PC9_epitope_Rep4 893.4316894983299 893.43058993586 74.513 2 -0.7794213182144399 0.23552979160551804 1.0 ['nc|ENSG00000188089|Q3MJ16-2|PLA2G4E', 'ENSG00000188089|ENST00000696112|PLA2G4E', 'nc|ENSG00000188089|Q3MJ16|PLA2G4E'] 53511 8322 KVLQNFYSFQK True PC9_epitope_Rep3 1400.7452358163198 1400.7436049037901 36.983 3 -0.7794573220826122 0.23555999060812396 1.0 ['ENST00000398804.7_1_1:44165719-44170106:-|nuORF', 'ENST00000434346.1_1_1:44168245-44170073:-|nuORF'] 48024 9095 KAKTAVTEL True PC9_epitope_Rep4 959.56514619603 959.56404993586 42.57 2 -0.7795126388819194 0.23555999060812396 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-1|ZMYM6', 'ENST00000493328.5_1_1:35455862-35480681:-|nuORF'] 124826 23623 VLLKQLLLLLE True NCI_RA007_Epitope_Rep4 1293.86356004385 1293.86191490379 102.47 3 -0.7795343117760392 0.23555999060812396 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|358|2|anti-sense'] 93614 22257 RTARERRWP True PC9_epitope_Rep2 1226.6744709178997 1226.6733699358601 91.091 2 -0.7795484348820213 0.23555999060812396 1.0 ['ENST00000230538.11_1_6:112575672-112575810:-|nuORF'] 105483 7705 SVAYDCLWNY True H1975_Epitope_Rep2 1232.51721002744 1232.5161099358602 34.591 2 -0.7795565906540298 0.23556429483322816 1.0 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 110505 8086 TIQEYQRY True H1975_Epitope_Rep2 1099.52982331647 1099.5287299358602 36.05 2 -0.7795577351335647 0.23556429483322816 1.0 ['ENST00000555759.1_1_14:95918480-95934190:-|nuORF'] 140064 28207 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 116.73 3 -0.7795725618036243 0.23556429483322816 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 93114 22648 RRRQRRRRERD True H1975_Epitope_Rep2 1638.9475664895797 1638.94591490379 93.556 3 -0.7797439228789146 0.2356488818453953 1.0 ['ENST00000452135.6_3_5:179707603-179719088:-|nuORF'] 97229 18112 SFLLWWLL True PC9_epitope_Rep2 1076.6058888092 1076.60478993586 74.97 2 -0.7797633813057036 0.23567477145666113 1.0 ['ABCB9|p.I338Hfs*47|1|0.23|ENSG00000150967|chr12:122948665-122948666|-/G|frameshift_variant', 'nc|ENSG00000150967|Q9NP78-3|ABCB9', 'ENST00000538895.5_1_12:123424612-123444782:-|nuORF', 'nc|ENSG00000150967|Q9NP78-6|ABCB9', 'nc|ENSG00000150967|Q9NP78-5|ABCB9', 'nc|ENSG00000150967|Q9NP78-7|ABCB9', 'nc|ENSG00000150967|Q9NP78-2|ABCB9', 'ENSG00000150967|ENST00000280560|ABCB9'] 27542 21652 FPISSSPKAF True PC9_epitope_Rep5 1079.56514619603 1079.56404993586 88.329 2 -0.779765458821999 0.2356972018018811 1.0 ['nc|ENSG00000198585|Q96DE0-2|NUDT16', 'nc|ENSG00000198585|Q96DE0-4|NUDT16'] 79175 13665 PGEDPPVS True NCI_RA007_Epitope_Rep3 796.36029837988 796.35920993586 61.061 2 -0.779801877662051 0.2356972018018811 1.0 ['ENST00000392914.3_1_12:102517666-102545686:+|nuORF'] 132618 9500 VYPSQALPPK True NCI_RA007_Epitope_Rep2 1098.6073453611798 1098.6062499358602 41.566 2 -0.7799644914124255 0.23573430369903012 1.0 ['ENSG00000171940|ENST00000371471|ZNF217'] 59681 7745 LGTHWKLYS True H1975_Epitope_Rep3 1103.5763795860698 1103.5752899358602 34.773 2 -0.7799820521888865 0.23573430369903012 1.0 ['ENST00000319933.6_1_5:102594502-102611616:+|nuORF', 'ENST00000515669.5_1_5:102594747-102611616:+|nuORF', 'ENST00000510890.1_1_5:102595280-102611616:+|nuORF'] 24610 5494 FAPDGEAR True NCI_RA007_Epitope_Rep2 861.3980808709299 861.39698993586 25.988 2 -0.7800237671608763 0.23574551750447517 1.0 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-2|TNS3'] 50496 3780 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 19.118 3 -0.780034612213516 0.23575673098085248 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 16294 9045 EEIPKYWDQGL True PC9_epitope_Rep3 1376.66123140884 1376.6601299358601 39.734 2 -0.7800876714385647 0.2357972885732731 1.0 ['PDILT|p.R364Lfs*5|1|0.18|ENSG00000169340|chr16:20369515-20369517|TGC/A|frameshift_variant', 'ENSG00000169340|ENST00000302451|PDILT'] 30063 14944 FYLHIISL True PC9_epitope_Rep2 1004.5695033004799 1004.56840993586 62.742 2 -0.7801408283782155 0.23583438481176092 1.0 ['ENSG00000172197|ENST00000324607|MBOAT1', 'nc|ENSG00000172197|Q6ZNC8-2|MBOAT1'] 61076 5049 LLAVSHVG True PC9_epitope_Rep6 794.46503823194 794.46394993586 27.056 2 -0.7801419291076541 0.23583438481176092 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 20134 11874 ENLLKSLQAPE True NCI_RA007_Epitope_Rep2 1240.66631678928 1240.66520993586 50.789 2 -0.7801889005660455 0.2358568075117371 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 41566 16369 IDEIAAQAETM True H1975_Epitope_Rep2 1190.5489040785399 1190.5478099358602 68.184 2 -0.7802021011233855 0.2358568075117371 1.0 ['ENSG00000123104|ENST00000381340|ITPR2'] 128001 21904 VRQLRHLHRTR True PC9_epitope_Rep6 1470.8756303359398 1470.8745299358602 97.156 2 -0.7802633115075045 0.23586801836827512 1.0 ['nc|ENSG00000184274|P59091|LINC00315'] 76761 18217 NTVITPMLNP True PC9_epitope_Rep6 1098.57433098074 1098.5732299358601 82.715 2 -0.7803057872343799 0.2359085707579003 1.0 ['ENSG00000166884|ENST00000300127|OR4D6'] 67265 8003 LTDMSFREQ True H1975_Epitope_Rep1 1125.5124590001699 1125.51136993586 35.727 2 -0.780379983457978 0.23596379267344453 1.0 ['chr2:142883035-142885349|132|18.84|0.23|6.38|+|1|TE_info:L1PA6,L1PA6_dup723,L1,LINE,donor,-,142882331,142883035|None,KYNU|8'] 73129 9928 NEALRDRHWK True NCI_RA007_Epitope_Rep1 1323.6796158679902 1323.6785099358601 42.621 2 -0.7804249562385827 0.23598274799753544 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.S2410Lfs*12|1|0.26|ENSG00000197653|chr12:123867998-123867998|C/-|frameshift_variant'] 80423 14959 PLKGIKSVI True PC9_epitope_Rep4 953.62735252977 953.62624993586 65.479 2 -0.7804307170506707 0.23598274799753544 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'nc|ENSG00000183605|Q6P4A7-3|SFXN4'] 64454 11665 LQSSVLAL True PC9_epitope_Rep1 829.49091862661 829.48982993586 49.746 2 -0.7804389095190144 0.23598274799753544 1.0 ['ENST00000423853.5_1_19:54876070-54876483:-|nuORF', 'ENST00000436513.5_1_19:54872785-54876477:-|nuORF'] 7573 5809 ASGGAWKS True PC9_epitope_Rep3 762.36605246666 762.36494993586 27.414 2 -0.780461673341049 0.23599395601977496 1.0 ['TSPYL2|p.S127Afs*20|1|0.17|ENSG00000184205|chrX:53082870-53082870|G/-|frameshift_variant'] 99543 10942 SLEYNFERK True PC9_epitope_Rep1 1184.5825871653199 1184.5814899358602 46.976 2 -0.7804690734489396 0.23599823969488046 1.0 ['SYT4|p.N351Mfs*20|1|0.18|ENSG00000132872|chr18:43270569-43270569|G/-|frameshift_variant', 'nc|ENSG00000132872|Q9H2B2-2|SYT4', 'ENSG00000132872|ENST00000255224|SYT4'] 45657 6099 ISIQNPFPICR True NCI_RA007_Epitope_Rep4 1286.68052738478 1286.67942993586 30.075 2 -0.7804760986470431 0.23599823969488046 1.0 ['ENST00000357635.9_1_15:75192875-75193112:-|nuORF'] 85775 15045 QLWNTFWILRR True PC9_epitope_Rep1 1531.8412018898298 1531.83955490379 62.689 3 -0.7804814033232284 0.23599823969488046 1.0 ['ENST00000368173.7_1_1:158068274-158068373:+|nuORF'] 56802 10111 LEAVKHKSDP True PC9_epitope_Rep6 1122.6033226099 1122.6022299358601 49.5 2 -0.7805180374348697 0.2360318601205756 1.0 ['FAM118B|p.L272P|1|0.27|ENSG00000197798|chr11:126256685-126256685|T/C|missense_variant'] 138712 9595 YRVWWSTWRQR True NCI_RA007_Epitope_Rep1 1622.8218634275797 1622.8207699358602 41.319 2 -0.7805323216679262 0.2360318601205756 1.0 ['nc|ENSG00000198089|A8K8P3-4|SFI1'] 46428 4970 ITLELSCCKY True H1975_Epitope_Rep2 1171.5617176917099 1171.56007490379 24.201 3 -0.7805364230726998 0.2360318601205756 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD', 'ENST00000546912.1_1_12:69260670-69264157:-|nuORF', 'ENSG00000135678|ENST00000551568|CPM'] 36512 19444 GVKHAPYISI True PC9_epitope_Rep4 1083.6076797143498 1083.60658993586 82.904 2 -0.7805431238659369 0.23604306627159916 1.0 ['nc|ENSG00000249242|B9EJG8-2|TMEM150C', 'ENSG00000249242|ENST00000449862|TMEM150C'] 98146 11080 SICVMLVVI True PC9_epitope_Rep6 975.5496964560299 975.54858993586 53.539 2 -0.7805555793972947 0.23605427209387606 1.0 ['ENSG00000228594|ENST00000422725|FNDC10'] 100273 9440 SLLRMMLGI True NCI_RA007_Epitope_Rep2 1032.58239356664 1032.58128993586 41.331 2 -0.7805710665399677 0.23607668275224783 1.0 ['ENSG00000255974|ENST00000301141|CYP2A6'] 97218 9031 SFLDFWYTYVY True H1975_Epitope_Rep1 1502.67581884382 1502.6747299358601 39.645 2 -0.780595293704755 0.23607668275224783 1.0 ['OR9G4|p.S75Y|1|0.25|ENSG00000172457|chr11:56743543-56743543|G/T|missense_variant'] 44607 16523 IPHQRRSI True PC9_epitope_Rep5 1005.58319630201 1005.58208993586 68.556 2 -0.7806322489764663 0.23608788758837163 1.0 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B'] 98145 12476 SICVMLVVI True PC9_epitope_Rep2 975.5496964560299 975.54858993586 53.298 2 -0.7806414828069794 0.23611375936872056 1.0 ['ENSG00000228594|ENST00000422725|FNDC10'] 41875 20779 IDVLANALP True PC9_epitope_Rep1 924.5280324113199 924.52692993586 84.756 2 -0.7806647170562371 0.23615429744793195 1.0 ['ENST00000381055.7_1_5:64447501-64447618:-|nuORF'] 27208 15268 FLTLLMRWYQP True H1975_Epitope_Rep3 1466.77442776962 1466.7733299358601 64.136 2 -0.7806720702686473 0.2361655006526745 1.0 ['ENST00000303531.11_2_16:24231131-24231431:+|nuORF'] 28329 12798 FSAFRILRSR True PC9_epitope_Rep5 1251.7200241279897 1251.71836490379 54.238 3 -0.7808168443705316 0.23619137015634625 1.0 ['ENSG00000084754|ENST00000380649|HADHA', 'nc|ENSG00000084754|P40939-2|HADHA'] 127267 11457 VQLCCQRNIP True H1975_Epitope_Rep3 1172.57943344452 1172.5783299358602 49.188 2 -0.7808550185954877 0.23621723890119237 1.0 ['nc|ENSG00000131844|Q9HCC0-2|MCCC2', 'ENSG00000131844|ENST00000340941|MCCC2'] 65789 17103 LSISFDLNGSV True PC9_epitope_Rep1 1150.58700383942 1150.5859099358602 70.612 2 -0.7809395678645327 0.23623964215003299 1.0 ['SSTR2|p.P18S|1|0.39|ENSG00000180616|chr17:73169371-73169371|C/T|missense_variant'] 12417 12037 DKIEHKLQHHK True NCI_RA007_Epitope_Rep1 1411.76843087239 1411.76732993586 50.808 2 -0.7809448260041315 0.23623964215003299 1.0 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 875 16101 ADLLAVHAV True PC9_epitope_Rep2 907.51271670035 907.51160993586 67.19 2 -0.7809615636176397 0.23624737853256486 1.0 ['ENSG00000038219|ENST00000040738|BOD1L1'] 138521 22340 YRLKFGRK True PC9_epitope_Rep6 1066.6399829021398 1066.63888993586 98.902 2 -0.7809626946729232 0.23624737853256486 1.0 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'PTPRD|p.G855C|3|0.2|ENSG00000153707|chr9:8486254-8486254|C/A|missense_variant'] 103021 6429 SQKDLENDP True NCI_RA007_Epitope_Rep5 1044.47236801 1044.4712699358602 31.398 2 -0.7809972656081973 0.23625164980202376 1.0 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 104853 3396 STEPPYSQK True NCI_RA007_Epitope_Rep4 1035.48728979815 1035.48618993586 18.919 2 -0.781006705458124 0.23625164980202376 1.0 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000401075.3_1_1:31961199-31961370:-|nuORF', 'ENST00000443590.1_1_2:107314616-107314670:-|nuORF'] 138091 18314 YQFEYVSQHL True PC9_epitope_Rep5 1312.6088019131598 1312.60714490379 75.46 3 -0.7810078385028303 0.23625164980202376 1.0 ['nc|ENSG00000128578|Q9ULQ0-2|STRIP2', 'ENSG00000128578|ENST00000249344|STRIP2'] 135646 5806 YEEVKQAGRY True H1975_Epitope_Rep2 1241.6040508858896 1241.6029499358601 27.323 2 -0.781060816683645 0.23625245622782062 1.0 ['TMEM104-PCYT2|3|fusion', 'TMEM104-PCYT2|1|fusion', 'TMEM104-PCYT2|2|fusion', 'nc|ENSG00000185813|Q99447-2|PCYT2', 'nc|ENSG00000185813|Q99447-4|PCYT2', 'ENSG00000185813|ENST00000538936|PCYT2', 'nc|ENSG00000185813|Q99447-3|PCYT2'] 39406 20900 HLWHPRRHYLL True PC9_epitope_Rep5 1526.8371195688999 1526.83602993586 85.446 2 -0.7810743002258709 0.23625245622782062 1.0 ['ENST00000448759.1_1_1:43352960-43353698:-|nuORF'] 56077 14035 LDLFFRWLFD True H1975_Epitope_Rep3 1370.7023083751799 1370.70120993586 59.307 2 -0.7810851589901312 0.23625245622782062 1.0 ['TMEM63B|p.L586Rfs*10|1|0.33|ENSG00000137216|chr6:44151929-44151929|T/-|frameshift_variant', 'nc|ENSG00000137216|Q5T3F8-3|TMEM63B', 'ENSG00000137216|ENST00000323267|TMEM63B'] 85544 18371 QLLCSMRWRTW True PC9_epitope_Rep1 1478.7274946605398 1478.7263899358602 75.456 2 -0.7811014317027575 0.23625245622782062 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 56565 19339 LDVSVFSCVI True PC9_epitope_Rep4 1080.552532907 1080.5514299358601 82.496 2 -0.7811626917935466 0.2362713902371072 1.0 ['ENST00000479950.5_1_6:41035018-41035069:-|nuORF'] 87978 8949 QVRDWSHYFKI True PC9_epitope_Rep1 1477.7466327986497 1477.74499490379 39.265 3 -0.7811738412844716 0.2362713902371072 1.0 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 41841 19994 IDTEEFFVKYK True NCI_RA007_Epitope_Rep1 1417.71293262853 1417.7118299358601 81.98 2 -0.7812066229714711 0.2362713902371072 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'CHD9|p.W1426Mfs*3|1|0.15|ENSG00000177200|chr16:53263047-53263048|-/A|frameshift_variant'] 42521 17330 IERSEMFKKP True PC9_epitope_Rep3 1263.66454296747 1263.66289490379 71.834 3 -0.7812301285047801 0.23629725211883046 1.0 ['ENSG00000187498|ENST00000375820|COL4A1'] 118917 6551 VEEQESRVHY True H1975_Epitope_Rep3 1274.58912909774 1274.58802993586 30.167 2 -0.7812496801993034 0.23632311324212965 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'ENST00000485263.5_1_6:31998272-32000090:+|nuORF', 'ENST00000478388.1_1_6:31999390-31999952:+|nuORF'] 14689 14704 DVPAEPFP True H1975_Epitope_Rep2 870.4123339527399 870.41122993586 61.721 2 -0.7813310962567043 0.23634204275534443 1.0 ['ENST00000468090.5_1_21:45179541-45179850:+|nuORF'] 64352 5913 LQNRSHGK True NCI_RA007_Epitope_Rep1 938.50461162814 938.50350993586 27.051 2 -0.781375540003882 0.23634204275534443 1.0 ['ENST00000569909.1_1_15:55611448-55611893:+|nuORF', 'ENST00000566072.1_1_15:55611475-55617022:+|nuORF', 'ENSG00000069943|ENST00000164305|PIGB'] 124540 12220 VLGDEVIG True PC9_epitope_Rep4 800.4279840168799 800.42688993586 54.825 2 -0.7813784195391464 0.23634204275534443 1.0 ['ENSG00000214595|ENST00000356458|EML6'] 127655 18018 VRELRGLG True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 76.104 2 -0.781459833608628 0.23635323959356627 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 80265 18289 PLDQLNLL True PC9_epitope_Rep3 924.5280324113199 924.52692993586 75.554 2 -0.7814932118822765 0.2363790980001173 1.0 ['ENST00000311765.3_1_16:66920419-66920542:+|nuORF'] 114757 11478 TSVQQWPA True PC9_epitope_Rep2 915.4450310633498 915.44392993586 49.468 2 -0.7815183135488386 0.23639029396671798 1.0 ['ENSG00000150457|ENST00000382592|LATS2'] 128058 16407 VRRLPGGG True H1975_Epitope_Rep1 810.4824196315798 810.48132993586 68.47 2 -0.781595391089331 0.23641268491503806 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 124407 11695 VLEESNKIE True PC9_epitope_Rep3 1059.54480467427 1059.54370993586 50.005 2 -0.7816176700889216 0.23641268491503806 1.0 ['ENSG00000139780|ENST00000267273|METTL21C'] 87675 17321 QVDARGNILL True PC9_epitope_Rep5 1097.61930702721 1097.61820993586 71.626 2 -0.7816316446106415 0.2364238798967863 1.0 ['GABRB1|p.H364R|1|0.11|ENSG00000163288|chr4:47425684-47425684|A/G|missense_variant'] 120982 18566 VGESKFFLCQV True PC9_epitope_Rep5 1255.6270948295899 1255.6254449037901 76.439 3 -0.7816425144463466 0.2364316082685823 1.0 ['nc|ENSG00000149294|P13591-3|NCAM1', 'nc|ENSG00000149294|P13591-5|NCAM1', 'nc|ENSG00000149294|P13591-4|NCAM1', 'nc|ENSG00000149294|P13591-1|NCAM1', 'ENSG00000149294|ENST00000316851|NCAM1', 'NCAM1|p.V206Sfs*3|1|0.21|ENSG00000149294|chr11:113206167-113206167|G/-|frameshift_variant', 'nc|ENSG00000149294|P13591-6|NCAM1'] 18574 11630 EKYQLRLNGMK True NCI_RA007_Epitope_Rep1 1378.7391048900597 1378.7380099358602 49.21 2 -0.781660112017402 0.2364316082685823 1.0 ['ENST00000484561.5_1_2:203690406-203693732:-|nuORF'] 15698 15177 ECYDGYESSY True H1975_Epitope_Rep2 1214.4073847949398 1214.40574490379 63.533 3 -0.781752971008839 0.2364721232645761 1.0 ['CFHR4|p.T541Kfs*30|2|0.26|ENSG00000134365|chr1:196918294-196918294|C/-|frameshift_variant', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4'] 66939 14874 LSYKVQPF True PC9_epitope_Rep5 980.5331177917598 980.53202993586 62.215 2 -0.7817970124669777 0.23648331671846595 1.0 ['ENST00000521259.1_1_8:87516185-87516770:+|nuORF'] 44116 19482 ILNKNQSLL True PC9_epitope_Rep5 1041.61824439805 1041.6171499358602 79.99 2 -0.7818409867537137 0.2364945098441646 1.0 ['ENSG00000124214|ENST00000371856|STAU1'] 119220 16580 VEKQLKLRERP True H1975_Epitope_Rep3 1394.83578215622 1394.83468993586 69.273 2 -0.7819169741172162 0.23652808725225755 1.0 ['ENST00000511562.5_1_4:164415926-164433975:+|nuORF'] 47949 9489 KAAQVTAG True PC9_epitope_Rep1 744.4130026590799 744.4124549679301 41.356 1 -0.7819488407888164 0.23652808725225755 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 56349 8410 LDRKANERDVP True NCI_RA007_Epitope_Rep2 1311.68951184535 1311.6884099358601 37.354 2 -0.7819775732995624 0.23652808725225755 1.0 ['SCEL|p.V76A|1|0.61|ENSG00000136155|chr13:77563836-77563836|T/C|missense_variant'] 69283 10512 LVPELQAT True PC9_epitope_Rep5 869.4858332461699 869.48472993586 45.422 2 -0.7820231976931645 0.23653927906533562 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 64125 3415 LQEFKEDIHNR True NCI_RA007_Epitope_Rep1 1427.7157265931899 1427.71408490379 17.183 3 -0.7820622703545702 0.23656166170714904 1.0 ['ENSG00000185222|ENST00000372661|TCEAL9'] 2396 9343 AEQKKWEEQHE True H1975_Epitope_Rep3 1440.66335666716 1440.66224993586 40.937 2 -0.7820954644898582 0.23656166170714904 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 128090 5109 VRRMWIMKRL True PC9_epitope_Rep1 1387.8056854115898 1387.8040349037901 24.505 3 -0.7822403024848662 0.23657285253591323 1.0 ['CFAP61|p.A893Pfs*70|1|0.32|ENSG00000089101|chr20:20277339-20277339|G/-|frameshift_variant'] 109493 8787 TGYLNTVTV True PC9_epitope_Rep3 966.5022115863 966.50110993586 38.751 2 -0.7823255380372438 0.23659870127966462 1.0 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF'] 30674 9367 GALKEKYL True H1975_Epitope_Rep2 920.5331177917599 920.53202993586 40.992 2 -0.7823328673859817 0.2366095634461232 1.0 ['nc|ENSG00000142611|Q9HAZ2-2|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-3|PRDM16', 'ENSG00000142611|ENST00000270722|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-4|PRDM16'] 74507 23119 NKRSFQLHQ True PC9_epitope_Rep1 1156.61013932584 1156.6090499358602 93.722 2 -0.7823705114273419 0.2366095634461232 1.0 ['nc|ENSG00000183423|Q3SXY7-2|LRIT3', 'ENSG00000183423|ENST00000594814|LRIT3'] 82421 9346 PVATEQLLST True NCI_RA007_Epitope_Rep3 1057.5655401188499 1057.56444993586 43.856 2 -0.782392590043617 0.2366095634461232 1.0 ['ENSG00000116199|ENST00000263733|FAM20B', 'FAM20B|p.K233Nfs*15|1|0.1|ENSG00000116199|chr1:179064049-179064088|AAGCACCGTCACCCATGGGGCAGGACTTACCGAGAAGGCA/-|frameshift_variant'] 56536 14700 LDVEMKLWR True PC9_epitope_Rep1 1188.6325145631997 1188.6314099358601 61.363 2 -0.7824114528950239 0.2366095634461232 1.0 ['nc|ENSG00000163520|P98095|FBLN2', 'ENSG00000163520|ENST00000404922|FBLN2'] 140913 11135 YYWPRPRRYVE True H1975_Epitope_Rep1 1583.7997310006697 1583.79808490379 47.798 3 -0.7824215783784937 0.2366095634461232 1.0 ['ENSG00000274274|ENST00000612958|GAGE13'] 100990 7654 SLSWSAQPAV True PC9_epitope_Rep1 1044.5240096600398 1044.52290993586 34.263 2 -0.7824465199030367 0.2366095634461232 1.0 ['ENST00000474141.5_2_7:99746590-99751116:+|nuORF', 'ENST00000488338.2_1_7:99750348-99751116:+|nuORF'] 85091 10959 QIQNENLLLRQ True PC9_epitope_Rep1 1367.75211210191 1367.75100993586 47.041 2 -0.7824632478595155 0.2366095634461232 1.0 ['ENST00000571006.5_1_16:46521999-46540142:-|nuORF', 'ENST00000566201.6_1_16:46508202-46534771:-|nuORF'] 127656 18326 VRELRGLG True NCI_RA007_Epitope_Rep5 898.5348491272598 898.53374993586 77.292 2 -0.7824832635136664 0.2366095634461232 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 45291 6213 ISAGGYIK True PC9_epitope_Rep5 807.44905381463 807.44794993586 28.879 2 -0.7825616668098868 0.2366095634461232 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 63872 18478 LPVDVQNGFI True H1975_Epitope_Rep1 1100.5866099165999 1100.58550993586 77.03 2 -0.782584236883775 0.2366095634461232 1.0 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'ENST00000503773.6_1_5:55236912-55256289:-|nuORF'] 122214 12349 VGRLRWGP True PC9_epitope_Rep3 939.5402688608699 939.53916993586 52.529 2 -0.7825907589473055 0.2366095634461232 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.R1248Pfs*56|1|0.39|ENSG00000205978|chr14:24415486-24415487|-/G|frameshift_variant', 'NYNRIN|p.D217*|1|0.16|ENSG00000205978|chr14:24408318-24408319|-/T|frameshift_variant'] 95046 6457 RYRNLWERYY True PC9_epitope_Rep5 1517.7527808082498 1517.75113490379 29.811 3 -0.7826086121715002 0.2366095634461232 1.0 ['ARL6|p.H82R|2|0.12|ENSG00000113966|chr3:97780674-97780674|A/G|missense_variant'] 57970 21919 LEQRHKHNK True PC9_epitope_Rep6 1188.6475874637197 1188.64594490379 97.214 3 -0.782653982588639 0.2366095634461232 1.0 ['ENST00000468917.1_1_22:20103119-20104069:-|nuORF', 'ENST00000494641.1_1_22:20103119-20103621:-|nuORF', 'ENST00000480460.1_1_22:20103056-20103595:-|nuORF', 'ENST00000494820.5_1_22:20100432-20103278:-|nuORF', 'nc|ENSG00000099899|Q8IZ69-2|TRMT2A', 'ENSG00000099899|ENST00000252136|TRMT2A'] 23384 8393 EVVDTFTITM True NCI_RA007_Epitope_Rep5 1154.5529268298199 1154.55182993586 38.96 2 -0.7826616985248414 0.2366095634461232 1.0 ['ENSG00000106034|ENST00000310396|CPED1'] 18105 8914 EILFVEKMTSS True H1975_Epitope_Rep1 1282.64788984382 1282.6467899358602 39.191 2 -0.7826637500674943 0.2366095634461232 1.0 ['TPTE|p.G538V|2|0.1|ENSG00000274391|chr21:10605509-10605509|G/T|missense_variant'] 139619 7746 YTRQERYRARP True NCI_RA007_Epitope_Rep5 1494.7803925384198 1494.77928993586 36.493 2 -0.7826863740252664 0.2366095634461232 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 128071 27245 VRRLPGGG True PC9_epitope_Rep2 810.4824196315798 810.48132993586 112.56 2 -0.782719341132314 0.2366095634461232 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 128213 25371 VRVGALLL True PC9_epitope_Rep2 839.5592729699499 839.5587249679301 103.27 1 -0.7827195855940081 0.2366095634461232 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 28917 12639 FTEEYQKSLLE True H1975_Epitope_Rep2 1385.6714617393698 1385.6703699358602 53.715 2 -0.7827720402034257 0.23661728286513972 1.0 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 37674 7368 HAKEQLPKYQY True NCI_RA007_Epitope_Rep1 1403.7197493444698 1403.71810490379 32.654 3 -0.7827742967418708 0.23661728286513972 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2', 'ENST00000504704.6_1_4:159690364-159754995:+|nuORF'] 20274 7701 ENYYAMYFKY True H1975_Epitope_Rep3 1390.5903749676995 1390.58926993586 34.603 2 -0.7827865998475513 0.23662846927112335 1.0 ['CFAP47|p.L642F|1|0.5|ENSG00000165164|chrX:35970877-35970877|C/T|missense_variant'] 86294 14865 QQELTALYQ True H1975_Epitope_Rep1 1092.54513902744 1092.54457496793 62.412 1 -0.7828985827502895 0.23665084109958384 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000482952.5_1_2:233671364-233680450:+|nuORF'] 36525 6695 GVKMSELP True H1975_Epitope_Rep3 859.4473395624699 859.44624993586 30.708 2 -0.7829320431834514 0.23665084109958384 1.0 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1'] 117360 8323 VAASTGIDLL True PC9_epitope_Rep2 958.53351171458 958.53240993586 37.381 2 -0.7830231216566387 0.23665162349079827 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 6820 21767 AQHKQHQRLRE True NCI_RA007_Epitope_Rep1 1429.76507682745 1429.7639699358601 89.09 2 -0.7830392932516156 0.23665162349079827 1.0 ['ENSG00000172689|ENST00000308287|MS4A10'] 66748 7037 LSTSTVSQSL True PC9_epitope_Rep3 1021.52915461013 1021.5280499358599 32.079 2 -0.7830704602567956 0.23665162349079827 1.0 ['SMG1|p.L1340S|1|0.1|ENSG00000157106|chr16:18859116-18859116|A/G|missense_variant'] 36712 5309 GVNAFRRGAQR True NCI_RA007_Epitope_Rep1 1230.6693855374597 1230.66828993586 24.732 2 -0.7831005925648552 0.23665162349079827 1.0 ['ENST00000486440.5_1_7:100203133-100203232:+|nuORF'] 18157 7461 EINWSAQT True H1975_Epitope_Rep3 947.4348603024699 947.43376993586 33.677 2 -0.7831218814419519 0.23667399267399267 1.0 ['ENSG00000158077|ENST00000299481|NLRP14', 'NLRP14|p.W373Gfs*7|1|0.31|ENSG00000158077|chr11:7043143-7043143|T/-|frameshift_variant'] 72131 7896 MREPIMKADML True H1975_Epitope_Rep1 1333.65563515989 1333.6545299358602 35.325 2 -0.7832291166743125 0.23667399267399267 1.0 ['ENSG00000214107|ENST00000397548|MAGEB1'] 54585 19083 LADALPLHIAP True PC9_epitope_Rep2 1129.6495445263301 1129.64844993586 78.767 2 -0.7832623068085756 0.2366963605462111 1.0 ['ENSG00000186187|ENST00000335325|ZNRF1', 'nc|ENSG00000186187|Q8ND25-2|ZNRF1'] 112094 13351 TLTPLPYP True PC9_epitope_Rep2 900.49566965388 900.49456993586 56.627 2 -0.7832754944812845 0.2366963605462111 1.0 ['ENST00000498057.1_1_3:48678700-48679554:-|nuORF'] 61749 8639 LLIWFKREFPF True NCI_RA007_Epitope_Rep2 1494.8387422783396 1494.83764993586 38.25 2 -0.783427513225414 0.23679198288744982 1.0 ['nc|ENSG00000104946|Q9HA65-3|TBC1D17', 'nc|ENSG00000104946|Q9HA65-2|TBC1D17', 'ENSG00000104946|ENST00000221543|TBC1D17', 'ENST00000596243.5_1_19:50382536-50391878:+|nuORF', 'ENST00000600354.1_1_19:50390695-50391878:+|nuORF'] 140068 28767 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 119.8 3 -0.783486815111358 0.23679198288744982 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 76677 10765 NTLERREKHEK True H1975_Epitope_Rep3 1438.7640737679396 1438.7629699358602 46.488 2 -0.7834990375441506 0.23680316460332576 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 116315 9263 TVWLDLLK True H1975_Epitope_Rep1 986.5800679841799 986.57896993586 40.542 2 -0.7835147988428915 0.23681434599156118 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'FARP1|p.H110Qfs*8|1|0.2|ENSG00000152767|chr13:98368127-98368127|C/-|frameshift_variant', 'ENST00000595380.5_1_13:98996033-99036984:+|nuORF', 'ENST00000601853.5_1_13:98996033-99030171:+|nuORF'] 59345 18188 LGKHPAKFSL True PC9_epitope_Rep2 1096.6393141958 1096.63820993586 75.268 2 -0.7835362449616348 0.236822057487767 1.0 ['ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 15282 11205 EAGVTGIRRW True NCI_RA007_Epitope_Rep1 1143.61489035311 1143.61378993586 47.584 2 -0.7835583534608163 0.236822057487767 1.0 ['RC3H2|p.R156Pfs*98|1|0.31|ENSG00000056586|chr9:122890428-122890429|-/G|frameshift_variant'] 87745 9494 QVFNSTSNL True PC9_epitope_Rep4 1008.48762415132 1008.48652993586 44.131 2 -0.7835763630939743 0.2368332381077953 1.0 ['ENSG00000196267|ENST00000682614|ZNF836'] 122252 16205 VGRRAAKA True NCI_RA007_Epitope_Rep5 827.5089687325898 827.5084249679301 69.076 1 -0.7836109339364088 0.2368590682683856 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 128217 23590 VRVGALLL True PC9_epitope_Rep6 839.5592729699499 839.5587249679301 103.89 1 -0.7837229349781981 0.2368926065364839 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 14516 15479 DTYQKRLRFYW True NCI_RA007_Epitope_Rep2 1574.7993966474999 1574.79828993586 64.914 2 -0.7837352248055413 0.2368926065364839 1.0 ['ENSG00000117215|ENST00000375105|PLA2G2D'] 30839 6902 GAQDSFPLQQK True H1975_Epitope_Rep1 1217.6040508858898 1217.6029499358601 31.588 2 -0.7837414036690746 0.2368926065364839 1.0 ['ENSG00000094804|ENST00000209728|CDC6'] 3273 14330 AGFVWRLRG True PC9_epitope_Rep5 1060.5930327097199 1060.5919299358602 60.121 2 -0.7837520181286824 0.23690031494909544 1.0 ['chr22:23779368-23780359|478|27.58|0.78|5.15|+|ENST00000437086|MMP11,MMP11', 'ENST00000465385.5_1_22:24122222-24125728:+|nuORF', 'ENSG00000099953|ENST00000215743|MMP11', 'ENST00000492464.1_1_22:24123155-24123763:+|nuORF'] 57430 4657 LEILIFCILLY True NCI_RA007_Epitope_Rep1 1351.78253284183 1351.78087490379 22.199 3 -0.7837521343599936 0.23690031494909544 1.0 ['nc|ENSG00000104361|Q9H841-1|NIPAL2', 'ENSG00000104361|ENST00000430223|NIPAL2'] 118867 12973 VEELKNAIHEL True PC9_epitope_Rep3 1293.69286589029 1293.69121490379 54.929 3 -0.7837636419743546 0.23692614185685407 1.0 ['nc|ENSG00000150676|Q8IWF9-3|CCDC83', 'ENSG00000150676|ENST00000342404|CCDC83', 'nc|ENSG00000150676|Q8IWF9-2|CCDC83'] 127489 16665 VQTLRWQRWQR True NCI_RA007_Epitope_Rep2 1555.84841252859 1555.84730993586 69.556 2 -0.7838074083826831 0.23693384894826272 1.0 ['ENSG00000167895|ENST00000318430|TMC8'] 57439 11153 LEINRAIYYK True H1975_Epitope_Rep3 1281.7081220316097 1281.7070299358602 47.995 2 -0.7838100853953412 0.23693384894826272 1.0 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-4|PRDM2', 'ENST00000502724.5_1_1:14065411-14095647:+|nuORF', 'ENST00000491134.5_1_1:14057588-14095647:+|nuORF'] 4142 9219 AHVLELTAEI True H1975_Epitope_Rep1 1094.5971746003001 1094.5960699358602 40.37 2 -0.783832661464337 0.23695967422988473 1.0 ['ENSG00000068366|ENST00000672401|ACSL4', 'nc|ENSG00000068366|O60488|ACSL4'] 32881 7754 GILPLVGMAMV True NCI_RA007_Epitope_Rep5 1099.61335934175 1099.61226993586 36.524 2 -0.7838714436010905 0.23701479419950197 1.0 ['ENSG00000134285|ENST00000550765|FKBP11', 'ENST00000546847.5_1_12:49315769-49317670:-|nuORF'] 17000 12234 EGKKGKTTI True PC9_epitope_Rep6 960.5603951687599 960.55928993586 58.433 2 -0.7839586569073472 0.23708456006210543 1.0 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 24917 21515 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 88.028 2 -0.7840061874461958 0.23709573470822592 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 121001 14745 VGEYNSALP True PC9_epitope_Rep2 948.4552613938798 948.45416993586 61.984 2 -0.784029378656187 0.23711611967839727 1.0 ['ENSG00000119041|ENST00000263956|GTF3C3'] 16367 11016 EELEDETRRL True NCI_RA007_Epitope_Rep1 1288.6259085292797 1288.6248099358602 46.845 2 -0.784051298632337 0.23711611967839727 1.0 ['ENSG00000051382|ENST00000674063|PIK3CB', 'PIK3CB-BFSP2|1|fusion'] 93057 20919 RRRKKRHPQR True NCI_RA007_Epitope_Rep2 1416.8762990422797 1416.87520993586 86.524 2 -0.7840620011224854 0.23711611967839727 1.0 ['ENST00000338745.10_3_3:18466531-18466693:-|nuORF', 'ENST00000450898.1_1_3:18465198-18466693:-|nuORF'] 36804 4087 GVPPPAFEWYK True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 20.613 3 -0.7840820154621908 0.23711611967839727 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 99090 16136 SLADVILLQT True PC9_epitope_Rep2 1071.6175756917098 1071.61646993586 67.325 2 -0.7840983469586749 0.23711611967839727 1.0 ['ENSG00000170899|ENST00000370963|GSTA4', 'nc|ENSG00000170899|O15217-2|GSTA4'] 16737 14947 EEYEYMNRRRR True PC9_epitope_Rep1 1600.75285746124 1600.75120490379 62.315 3 -0.7840990043200087 0.23711611967839727 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3'] 128076 21113 VRRLPGGG True PC9_epitope_Rep6 810.4824196315798 810.48132993586 94.048 2 -0.7841265054470942 0.23711611967839727 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 67497 20584 LTELLLEPG True PC9_epitope_Rep2 983.5539128059899 983.55280993586 84.609 2 -0.7841311737623987 0.23711611967839727 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000479285.5_1_1:114437689-114438127:-|nuORF'] 28490 17422 FSFFWGGII True PC9_epitope_Rep4 1072.5382031721997 1072.5371099358601 75.007 2 -0.7841407254251961 0.23711611967839727 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C'] 8897 7576 AVGFSGSLQSL True PC9_epitope_Rep6 1064.55022440788 1064.54912993586 38.414 2 -0.7841495300269786 0.23711611967839727 1.0 ['nc|ENSG00000174521|Q8N6N2-2|TTC9B'] 69675 8154 LVWFQWSWNPP True NCI_RA007_Epitope_Rep2 1458.7084563847798 1458.70734993586 36.352 2 -0.7841591425062012 0.23711611967839727 1.0 ['YLPM1|p.G95Afs*124|1|0.21|ENSG00000119596|chr14:74763768-74763768|G/-|frameshift_variant'] 68681 7097 LVDAGQQLP True NCI_RA007_Epitope_Rep1 939.5025459394699 939.50144993586 31.599 2 -0.7841717127192988 0.2371272918985414 1.0 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 65228 7152 LSEDSQPLPP True H1975_Epitope_Rep2 1081.5291546101298 1081.52804993586 32.445 2 -0.7841902903163144 0.237153860797493 1.0 ['ENST00000582963.1_1_17:37884964-37885057:-|nuORF'] 36119 7399 GVEMWVFETKV True H1975_Epitope_Rep1 1323.6533095774298 1323.6522099358601 33.465 2 -0.7841986620045207 0.237153860797493 1.0 ['ENST00000593300.1_1_7:27139360-27139525:+|nuORF', 'ENST00000429611.7_1_7:27138873-27139525:+|nuORF', 'ENST00000434063.3_1_7:27135859-27139525:+|nuORF'] 46013 5474 ISVEDLWKAWK True NCI_RA007_Epitope_Rep4 1373.73433677945 1373.73268490379 27.64 3 -0.7842076197460192 0.237153860797493 1.0 ['nc|ENSG00000167323|Q13586-2|STIM1', 'nc|ENSG00000167323|Q13586|STIM1', 'ENSG00000167323|ENST00000526596|STIM1'] 33506 13282 GLGVWAPLEC True PC9_epitope_Rep5 1043.5110024481899 1043.5099099358602 56.099 2 -0.7842119899487873 0.237153860797493 1.0 ['ENST00000530791.5_1_11:65687742-65688356:+|nuORF'] 30831 17665 GAPVCCRK True NCI_RA007_Epitope_Rep3 832.4047635578399 832.40366993586 77.456 2 -0.7842179567937635 0.237153860797493 1.0 ['ENST00000537045.5_1_22:19026088-19026367:-|nuORF'] 120085 19938 VFGTKLTP True PC9_epitope_Rep1 861.4960040070499 861.49490993586 81.512 2 -0.7842617536937478 0.23715808586657294 1.0 ['MRGPRX4|p.V5L|1|0.34|ENSG00000179817|chr11:18173269-18173269|G/C|missense_variant', 'ENSG00000179817|ENST00000314254|MRGPRX4'] 67009 9470 LTAKEAMEH True PC9_epitope_Rep1 1028.49608066004 1028.49498993586 41.283 2 -0.7842656562650203 0.23715808586657294 1.0 ['ENSG00000070770|ENST00000262506|CSNK2A2'] 128068 22998 VRRLPGGG True PC9_epitope_Rep1 810.4824196315798 810.48132993586 93.257 2 -0.7842767073136434 0.23715808586657294 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 98701 12512 SIREQWWRWNR True H1975_Epitope_Rep1 1615.8120270198697 1615.81092993586 53.168 2 -0.784304395201349 0.23715883799929718 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 140241 8673 YWRHQLQQRRK True NCI_RA007_Epitope_Rep1 1597.87021060233 1597.86856490379 37.738 3 -0.7843213412503326 0.23715883799929718 1.0 ['nc|ENSG00000125741|Q9H6K4-2|OPA3'] 77750 6302 PAAPRQVPV True PC9_epitope_Rep3 933.5396001545298 933.53850993586 29.272 2 -0.7843463516759785 0.23715883799929718 1.0 ['ENST00000478344.6_1_9:140240296-140248823:-|nuORF', 'nc|ENSG00000187609|Q8N9H8-2|EXD3', 'ENST00000487745.5_1_9:140201404-140247406:-|nuORF', 'ENSG00000187609|ENST00000340951|EXD3'] 60276 17435 LIEKVSLIIF True PC9_epitope_Rep1 1173.7372969015698 1173.73564490379 71.861 3 -0.784369433838065 0.23715883799929718 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 27194 17221 FLSQPILL True H1975_Epitope_Rep3 929.5586042636099 929.55750993586 71.882 2 -0.7844286063364474 0.2371958183255732 1.0 ['ENSG00000172531|ENST00000376745|PPP1CA', 'CLCF1-PPP1CA|1|fusion', 'ENST00000526510.5_1_11:67166008-67168740:-|nuORF', 'nc|ENSG00000172531|P62136-2|PPP1CA', 'ENST00000532446.5_1_11:67166008-67168991:-|nuORF', 'ENSG00000186298|ENST00000335007|PPP1CC', 'nc|ENSG00000186298|P36873-2|PPP1CC', 'ENSG00000213639|ENST00000395366|PPP1CB', 'ENST00000464273.1_1_2:28974903-28999853:+|nuORF'] 6440 15526 APSNTFVAP True PC9_epitope_Rep2 902.4497820906199 902.44868993586 64.994 2 -0.7844309118083201 0.2371958183255732 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 110154 4610 TIDDKVGAA True NCI_RA007_Epitope_Rep3 888.4552613938798 888.45416993586 25.048 2 -0.7844857124484177 0.23720426329351135 1.0 ['ENSG00000182934|ENST00000332118|SRPRA', 'nc|ENSG00000182934|P08240-2|SRPRA'] 39216 14024 HLHISMYLLLG True NCI_RA007_Epitope_Rep2 1295.7060138566299 1295.70490993586 59.208 2 -0.7845253006011123 0.23720426329351135 1.0 ['OR5H1|p.P58S|1|0.35|ENSG00000231192|chr3:98132869-98132869|C/T|missense_variant'] 20814 6452 EQNWRQHREAY True NCI_RA007_Epitope_Rep2 1515.69672248411 1515.69508490379 29.706 3 -0.7845296768031336 0.23720426329351135 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 67986 12454 LTLSNHMSFH True NCI_RA007_Epitope_Rep5 1185.56007789893 1185.5589899358602 54.562 2 -0.7845376019665725 0.23720426329351135 1.0 ['ENSG00000127311|ENST00000247815|HELB', 'nc|ENSG00000127311|Q8NG08-2|HELB', 'HELB|p.R906Pfs*38|1|0.24|ENSG00000127311|chr12:66331193-66331194|-/C|frameshift_variant'] 36544 7295 GVKYNASSFAK True NCI_RA007_Epitope_Rep3 1170.6033226099 1170.60166490379 35.804 3 -0.7846529393258675 0.23720426329351135 1.0 ['ENSG00000079112|ENST00000027335|CDH17'] 24918 21596 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 88.378 2 -0.7846597863596962 0.23720426329351135 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 134597 14955 WWDIYYTLFEK True H1975_Epitope_Rep1 1562.7445671099797 1562.74346993586 62.765 2 -0.7846803751351217 0.23723007100505086 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 110746 7991 TKHDQREYDDQ True NCI_RA007_Epitope_Rep4 1433.61713475073 1433.61602993586 37.502 2 -0.7847880615997963 0.23729632394922923 1.0 ['MB21D2-FGF12|1|fusion', 'ENSG00000180611|ENST00000392452|MB21D2'] 128067 22356 VRRLPGGG True PC9_epitope_Rep1 810.4824196315798 810.48132993586 90.809 2 -0.7847890427757259 0.23729632394922923 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 102742 8095 SQEEGSLEEAW True H1975_Epitope_Rep3 1263.5255257816698 1263.52442993586 36.111 2 -0.7848538448740547 0.23730054164836772 1.0 ['GAS7|p.G272E|1|0.62|ENSG00000007237|chr17:9934236-9934236|C/T|missense_variant'] 83436 8497 QDAEPVKRAR True NCI_RA007_Epitope_Rep1 1168.63126869324 1168.63016993586 37.051 2 -0.7848768099005146 0.23730054164836772 1.0 ['ENST00000555241.5_2_14:64663518-64663803:+|nuORF'] 107847 5727 TARKKKKKK True PC9_epitope_Rep5 1114.7662460444199 1114.76514993586 27.021 2 -0.7848901654674872 0.23730054164836772 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 61427 13590 LLESHSSKL True PC9_epitope_Rep4 1012.55530978832 1012.55420993586 60.167 2 -0.7848963097578223 0.23731170675293878 1.0 ['ENSG00000141314|ENST00000269051|RHBDL3', 'nc|ENSG00000141314|P58872-3|RHBDL3'] 111311 6897 TLHRLEPSP True PC9_epitope_Rep3 1048.56654317836 1048.5654499358602 31.544 2 -0.7849136327203996 0.2373228715306242 1.0 ['ENST00000467808.5_1_X:100879846-100879927:+|nuORF'] 100034 9688 SLKKACPGVVP True H1975_Epitope_Rep1 1097.6267009067699 1097.6256099358602 42.19 2 -0.7849512140717483 0.23736331298581528 1.0 ['nc|ENSG00000163218|Q96LB8-2|PGLYRP4', 'ENSG00000163218|ENST00000359650|PGLYRP4'] 111358 25021 TLILKIVITIF True H1975_Epitope_Rep2 1272.84209632328 1272.84046490379 102.82 3 -0.7849862944994297 0.23737100197613994 1.0 ['nc|ENSG00000171365|P51795-1|CLCN5', 'ENSG00000171365|ENST00000376091|CLCN5'] 63062 9759 LNLAGNNLK True PC9_epitope_Rep4 955.54507945779 955.5439899358599 45.18 2 -0.7849974172157794 0.23737100197613994 1.0 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'ENST00000489172.5_1_3:101443520-101477325:+|nuORF', 'CEP97|p.V352Lfs*3|1|0.33|ENSG00000182504|chr3:101757658-101757658|G/-|frameshift_variant'] 10793 8055 DADEPWTFSST True NCI_RA007_Epitope_Rep1 1254.5040620610998 1254.5029699358602 35.329 2 -0.7850541416903882 0.23741144095087535 1.0 ['ENSG00000102996|ENST00000219271|MMP15', 'MMP15|p.A257Qfs*63|1|0.11|ENSG00000102996|chr16:58040556-58040556|G/-|frameshift_variant'] 85271 23372 QKRKRKKSRYK True NCI_RA007_Epitope_Rep4 1504.9426472665998 1504.9415499358602 101.47 2 -0.7850986307587419 0.23746651638684368 1.0 ['nc|ENSG00000112715|P15692-6|VEGFA', 'nc|ENSG00000112715|P15692-2|VEGFA', 'nc|ENSG00000112715|P15692-1|VEGFA', 'ENSG00000112715|ENST00000672860|VEGFA', 'nc|ENSG00000112715|P15692-14|VEGFA'] 5112 17168 ALLWMWWRRN True NCI_RA007_Epitope_Rep2 1430.7393796735798 1430.7382899358602 71.519 2 -0.7851411808221108 0.23748188697472228 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3', 'ESYT3-RPN1|1|fusion'] 91316 25595 RMGPPVGG True H1975_Epitope_Rep1 769.3904933926899 769.3899449679301 106.1 1 -0.7851609833086872 0.23748188697472228 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 134089 16257 WQRRRWLRPTR True H1975_Epitope_Rep1 1609.9178295010897 1609.91672993586 67.882 2 -0.7851777817051824 0.23748188697472228 1.0 ['nc|ENSG00000105618|Q8WWY3-2|PRPF31'] 78808 10594 PENNVLSPLP True H1975_Epitope_Rep3 1078.56587447202 1078.56476993586 45.819 2 -0.7852019370235874 0.23748188697472228 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.K120Sfs*3|1|0.3|ENSG00000141510|chr17:7676012-7676012|G/-|frameshift_variant', 'TP53|p.P75Lfs*48|2|0.29|ENSG00000141510|chr17:7676145-7676145|G/-|frameshift_variant', 'TP53|p.W53Cfs*4|1|0.2|ENSG00000141510|chr17:7676210-7676211|-/A|frameshift_variant', 'TP53|p.D49Sfs*69|1|0.56|ENSG00000141510|chr17:7676209-7676224|ACCATTGTTCAATATC/-|frameshift_variant', 'TP53|p.A84Pfs*39|1|0.27|ENSG00000141510|chr17:7676119-7676119|C/-|frameshift_variant', 'TP53|p.E56Kfs*67|1|0.26|ENSG00000141510|chr17:7676204-7676204|A/-|frameshift_variant', 'TP53|p.V73Wfs*50|5|0.34|ENSG00000141510|chr17:7676153-7676153|G/-|frameshift_variant', 'TP53|p.R65Efs*58|2|0.28|ENSG00000141510|chr17:7676177-7676177|G/-|frameshift_variant', 'TP53|p.P67Rfs*76|1|0.24|ENSG00000141510|chr17:7676153-7676169|GGGGGGAGCAGCCTCTG/-|frameshift_variant', 'TP53|p.N131Qfs*17|1|0.71|ENSG00000141510|chr17:7675221-7675222|TG/-|frameshift_variant', 'TP53|p.P64Sfs*59|1|0.34|ENSG00000141510|chr17:7676178-7676179|GG/A|frameshift_variant', 'TP53|p.A129Vfs*20|1|0.19|ENSG00000141510|chr17:7675226-7675227|-/A|frameshift_variant', 'TP53|p.P128Lfs*42|1|0.2|ENSG00000141510|chr17:7675229-7675229|G/-|frameshift_variant', 'TP53|p.M44Ifs*79|3|0.28|ENSG00000141510|chr17:7676237-7676237|C/-|frameshift_variant', 'TP53|p.S37Vfs*6|1|0.25|ENSG00000141510|chr17:7676236-7676261|GCATCAAATCATCCATTGCTTGGGAC/-|frameshift_variant', 'TP53|p.S46*|1|0.49|ENSG00000141510|chr17:7676204-7676232|AGTGAACCATTGTTCAATATCGTCCGGGG/-|frameshift_variant', 'TP53|p.S46Tfs*5|1|0.14|ENSG00000141510|chr17:7676217-7676233|TCAATATCGTCCGGGGA/-|frameshift_variant', 'TP53|p.D48Tfs*75|1|0.46|ENSG00000141510|chr17:7676227-7676227|C/-|frameshift_variant', 'TP53-FXR2|1|fusion'] 59715 13548 LGVASTLPAQC True PC9_epitope_Rep1 1058.5430308524599 1058.54192993586 56.968 2 -0.7853038904247231 0.2374972557628979 1.0 ['ENST00000594361.1_1_19:51849976-51850294:-|nuORF'] 76974 12242 NVQYALNP True PC9_epitope_Rep1 917.4606811274899 917.45958993586 51.948 2 -0.7853505006021023 0.2374972557628979 1.0 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant', 'ENST00000491891.1_1_2:27449097-27449208:+|nuORF'] 136502 9651 YHKWRIYYKKR True H1975_Epitope_Rep1 1639.9099501559897 1639.9088499358602 42.051 2 -0.785374785382509 0.2374972557628979 1.0 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'MLXIPL|p.A789Qfs*28|1|0.14|ENSG00000009950|chr7:73594349-73594349|C/-|frameshift_variant', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL'] 12188 9936 DILRKKGI True PC9_epitope_Rep2 941.6022004110899 941.60110993586 43.549 2 -0.785375741664832 0.2374972557628979 1.0 ['ENSG00000115539|ENST00000264254|PDCL3'] 119913 6822 VEWMQDFEAF True NCI_RA007_Epitope_Rep1 1300.5434247752798 1300.5423299358602 30.543 2 -0.7854363088576359 0.23750146352886078 1.0 ['nc|ENSG00000198522|Q9HCN4-4|GPN1', 'ENSG00000198522|ENST00000610189|GPN1', 'nc|ENSG00000198522|Q9HCN4-5|GPN1', 'nc|ENSG00000198522|Q9HCN4-2|GPN1', 'nc|ENSG00000198522|Q9HCN4-3|GPN1'] 45451 14694 ISEEKYIEQFR True H1975_Epitope_Rep3 1440.7248942945596 1440.7237899358602 61.892 2 -0.7854521239474385 0.23750146352886078 1.0 ['ENST00000334003.11_1_7:76959552-77026708:-|nuORF', 'nc|ENSG00000186088|A4D1B5-3|GSAP', 'nc|ENSG00000186088|A4D1B5-2|GSAP', 'ENSG00000186088|ENST00000257626|GSAP'] 126884 19917 VPTRARVF True PC9_epitope_Rep3 944.5555845718399 944.55448993586 81.851 2 -0.7854738279393987 0.23750146352886078 1.0 ['ENST00000534270.1_1_8:145742254-145742921:-|nuORF'] 18608 4001 ELAGSLAR True NCI_RA007_Epitope_Rep2 815.45011644379 815.44900993586 20.201 2 -0.7855493931616246 0.23752030557140977 1.0 ['ENST00000525275.5_1_8:145154265-145154844:-|nuORF', 'nc|ENSG00000179526|Q9H0F6-2|SHARPIN', 'ENSG00000179526|ENST00000398712|SHARPIN'] 125504 14306 VLVPRMCAV True PC9_epitope_Rep2 986.5405287546598 986.53942993586 60.292 2 -0.785559596892771 0.23752030557140977 1.0 ['ENST00000302516.9_1_16:70607775-70608060:+|nuORF'] 30576 1310 GAKKKKKKKK True NCI_RA007_Epitope_Rep3 1170.8288463009796 1170.82720490379 7.4507 3 -0.7855647208319445 0.23752030557140977 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 72995 4272 NDAPQFLEK True NCI_RA007_Epitope_Rep5 1060.5189242795998 1060.5178299358602 23.009 2 -0.7856746007971884 0.23759000175613182 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'RGS22|p.K902Nfs*4|1|0.26|ENSG00000132554|chr8:100002282-100002286|TAGAT/-|frameshift_variant', 'RGS22|p.P235Qfs*30|1|0.33|ENSG00000132554|chr8:100066187-100066187|G/-|frameshift_variant', 'nc|ENSG00000132554|Q8NE09-2|RGS22', 'RGS22|p.L146Ifs*37|1|0.28|ENSG00000132554|chr8:100071527-100071528|-/T|frameshift_variant'] 61389 9911 LLEMEFEERK True H1975_Epitope_Rep3 1322.6540378534198 1322.65294993586 43.155 2 -0.7857223638835118 0.2376018847769144 1.0 ['ITPRIPL1|p.P244Hfs*10|1|0.29|ENSG00000198885|chr2:96327357-96327357|C/-|frameshift_variant', 'nc|ENSG00000198885|Q6GPH6-3|ITPRIPL1', 'ENSG00000198885|ENST00000439118|ITPRIPL1', 'nc|ENSG00000198885|Q6GPH6-2|ITPRIPL1'] 68001 15871 LTLWRPPMVIN True H1975_Epitope_Rep3 1338.7482130217797 1338.7471099358602 66.496 2 -0.785732876646105 0.2376018847769144 1.0 ['ENST00000382303.5_1_9:677000-710887:+|nuORF', 'ENST00000382293.7_1_9:707199-710887:+|nuORF'] 100579 7368 SLQDTKPA True PC9_epitope_Rep5 858.4446967101799 858.44358993586 33.298 2 -0.7857413081080309 0.2376018847769144 1.0 ['nc|ENSG00000162891|Q9NYY1-2|IL20', 'ENSG00000162891|ENST00000367098|IL20'] 116050 20831 TVRSKERTPVD True PC9_epitope_Rep1 1286.69426287262 1286.6931699358602 84.954 2 -0.7857728355785989 0.2376018847769144 1.0 ['ENSG00000158623|ENST00000425248|COPG2'] 78590 5733 PDSDDEILEHT True H1975_Epitope_Rep3 1269.5360904653699 1269.53498993586 27.08 2 -0.7857744641325876 0.2376018847769144 1.0 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 83464 1997 QDENDDDDDWN True NCI_RA007_Epitope_Rep1 1379.4385612520698 1379.43746993586 10.51 2 -0.7858121458652367 0.23761724294347464 1.0 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1'] 76766 7073 NTVSTSLGHSK True H1975_Epitope_Rep2 1129.57275075761 1129.57111490379 32.135 3 -0.7858780237400813 0.23761724294347464 1.0 ['ENSG00000181072|ENST00000680005|CHRM2'] 9148 8973 AVMLYYSN True H1975_Epitope_Rep2 959.4422541820301 959.44170496793 39.47 1 -0.7858875106164137 0.23761724294347464 1.0 ['ENSG00000135953|ENST00000258436|MFSD9'] 131720 21584 VWVWVCLRRRL True H1975_Epitope_Rep2 1484.8550781321599 1484.85343490379 89.301 3 -0.7859128365912907 0.23761724294347464 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 41029 13235 HYHKEYRQRYR True H1975_Epitope_Rep3 1634.8178406763 1634.8167499358601 56.164 2 -0.7859161940486079 0.23762492135258914 1.0 ['ENST00000600588.1_1_19:6593418-6593715:+|nuORF'] 91352 3186 RMPGRGKG True PC9_epitope_Rep3 857.4653896684498 857.46428993586 17.279 2 -0.785929920161725 0.23762492135258914 1.0 ['ENST00000342502.6_2_12:99038521-99038740:-|nuORF'] 18387 11003 EIYSWILDHFP True NCI_RA007_Epitope_Rep5 1418.68705223386 1418.6854049037902 48.957 3 -0.7859869518462981 0.2376472309605677 1.0 ['FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'FOXN2|p.E174Kfs*28|1|0.28|ENSG00000170802|chr2:48346733-48346733|G/-|frameshift_variant', 'ENSG00000170802|ENST00000340553|FOXN2', 'nc|ENSG00000170802|P32314-2|FOXN2'] 20184 7948 ENRLERLPEEI True NCI_RA007_Epitope_Rep1 1396.7310423041597 1396.72994993586 34.908 2 -0.7860445816010985 0.2376472309605677 1.0 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'ENST00000487251.5_1_6:53762124-53769284:+|nuORF'] 44271 9313 ILVKIFLKKRI True NCI_RA007_Epitope_Rep3 1369.9537124609299 1369.9526099358602 43.734 2 -0.7860593534467218 0.23764795388374374 1.0 ['ENST00000437852.2_1_9:116613102-116613318:-|nuORF'] 56400 11261 LDSDELHV True PC9_epitope_Rep4 926.4345259493001 926.43342993586 51.09 2 -0.7860634650778241 0.23764795388374374 1.0 ['ENSG00000185271|ENST00000636854|KLHL33', 'nc|ENSG00000185271|A6NCF5|KLHL33'] 100282 11953 SLLSNDLK True PC9_epitope_Rep4 888.4916469026 888.49054993586 53.768 2 -0.7861202717882766 0.23764795388374374 1.0 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163564|Q6K0P9-4|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-2|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-6|PYHIN1', 'ENSG00000163564|ENST00000368140|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-3|PYHIN1', 'nc|ENSG00000163564|Q6K0P9-5|PYHIN1'] 121673 10671 VGLKNLSVQ True PC9_epitope_Rep5 956.5654805492 956.56438993586 46.035 2 -0.786124536330687 0.23764795388374374 1.0 ['ENSG00000134250|ENST00000256646|NOTCH2', 'NOTCH2|p.D1733Y|1|0.16|ENSG00000134250|chr1:119922252-119922252|C/A|missense_variant'] 108060 8515 TDILCHLMP True H1975_Epitope_Rep1 1041.4987235123301 1041.49762993586 37.683 2 -0.786141078381825 0.23765910753474762 1.0 ['MAN2A1|p.M348L|1|0.22|ENSG00000112893|chr5:109770387-109770387|A/T|missense_variant'] 18447 11050 EKIARWEEWNK True NCI_RA007_Epitope_Rep1 1487.7521121019097 1487.75100993586 46.977 2 -0.7861591324786491 0.23766330665808377 1.0 ['ENSG00000140057|ENST00000267584|AK7'] 17682 10113 EHSIKVSV True PC9_epitope_Rep5 897.49198125577 897.49088993586 43.885 2 -0.7861638243151711 0.23766330665808377 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 137237 14195 YLEVKRLIF True PC9_epitope_Rep4 1179.7015800991899 1179.6999449037899 62.507 3 -0.7861723158951915 0.23766330665808377 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14'] 83164 5681 PYSSQLSSL True PC9_epitope_Rep6 980.48147614172 980.48036993586 29.967 2 -0.7862538977456831 0.2376890891535243 1.0 ['ENST00000513092.1_1_4:24582564-24586076:-|nuORF'] 133453 23190 WGKKMKGKI True PC9_epitope_Rep4 1074.6372060208198 1074.63610993586 97.429 2 -0.7863353824020682 0.23771139329393176 1.0 ['ENST00000380693.7_1_X:11777712-11777841:+|nuORF'] 12231 8457 DIQLTCYLSP True H1975_Epitope_Rep2 1151.55326118299 1151.55216993586 37.482 2 -0.7863452664665619 0.23771139329393176 1.0 ['ENSG00000204290|ENST00000454136|BTNL2', 'nc|ENSG00000204290|Q9UIR0-2|BTNL2', 'nc|ENSG00000204290|Q9UIR0-1|BTNL2', 'nc|ENSG00000204290|Q9UIR0-4|BTNL2', 'nc|ENSG00000204290|Q9UIR0-3|BTNL2'] 131200 22392 VVPIPVVKKKK True H1975_Epitope_Rep2 1233.85366406649 1233.85201490379 92.538 3 -0.7864291736032266 0.23773717395438654 1.0 ['ENSG00000103888|ENST00000394685|CEMIP'] 80990 16082 PNLQKEND True PC9_epitope_Rep6 956.45632402304 956.45522993586 74.19 2 -0.7864645626081831 0.23776295386055765 1.0 ['ENST00000552369.5_1_12:49233297-49239534:-|nuORF', 'ENST00000547135.5_1_12:49231823-49239549:-|nuORF'] 72927 11749 NCAYSKGRRRK True NCI_RA007_Epitope_Rep2 1337.70987045045 1337.7087699358601 50.297 2 -0.7865048879952832 0.23776714793522621 1.0 ['ENSG00000125848|ENST00000341420|FLRT3'] 16134 5950 EEEGMSYLY True H1975_Epitope_Rep2 1119.44304202767 1119.44194993586 27.87 2 -0.7865110356606727 0.23776714793522621 1.0 ['ENSG00000182459|ENST00000333437|TEX19'] 43793 17765 IKFEKDLRRIW True NCI_RA007_Epitope_Rep1 1502.8721676649398 1502.87106993586 73.241 2 -0.7865155507440001 0.23776714793522621 1.0 ['ENSG00000175756|ENST00000338338|AURKAIP1'] 122332 18806 VGRYLTLAI True PC9_epitope_Rep2 1004.6018660579199 1004.60076993586 77.708 2 -0.7865609329345196 0.23777481971241754 1.0 ['ENSG00000174136|ENST00000513185|RGMB'] 110334 13423 TIKEKAQAT True PC9_epitope_Rep5 988.5553097883198 988.55420993586 56.647 2 -0.7865691636391219 0.23777481971241754 1.0 ['ENSG00000166569|ENST00000299721|CPLX4'] 77889 16185 PAGTGHMTWP True H1975_Epitope_Rep2 1053.47020026537 1053.4691099358602 67.465 2 -0.7866256921158066 0.23778596922356796 1.0 ['nc|ENSG00000108509|O94983-6|CAMTA2'] 43353 20742 IHLGDRPYRCP True PC9_epitope_Rep5 1325.66627430297 1325.6651699358601 84.843 2 -0.7867237764111281 0.2377971184085424 1.0 ['ENSG00000196391|ENST00000354377|ZNF774'] 19319 16121 ELMDIIIETEL True PC9_epitope_Rep2 1317.67377023849 1317.67266993586 67.267 2 -0.7867622668914401 0.23780826726735513 1.0 ['ENSG00000039139|ENST00000265104|DNAH5'] 18216 11270 EIRNKNSYMK True H1975_Epitope_Rep1 1281.6499555324901 1281.6488499358602 48.327 2 -0.786791434020923 0.23783404273991837 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49', 'nc|ENSG00000137821|Q8IUZ0-3|LRRC49', 'ENSG00000137821|ENST00000260382|LRRC49', 'ENST00000561131.2_1_15:71341123-71341948:+|nuORF', 'nc|ENSG00000137821|Q8IUZ0-4|LRRC49'] 3430 13996 AGLALWPT True H1975_Epitope_Rep1 827.4541391950701 827.45359496793 58.996 1 -0.7869528498697275 0.23790369763632108 1.0 ['ENST00000229340.9_1_12:120534221-120535049:-|nuORF'] 63684 19808 LPPTLVSKDL True PC9_epitope_Rep2 1081.63831113629 1081.63720993586 81.581 2 -0.7869774580803769 0.2379259909316952 1.0 ['ENST00000370298.8_1_1:93544885-93544996:+|nuORF'] 103023 6901 SQKILGPFLK True NCI_RA007_Epitope_Rep5 1129.68593003505 1129.68427490379 33.227 3 -0.7870175740964263 0.2379259909316952 1.0 ['ENST00000555044.5_2_14:74364914-74371672:+|nuORF'] 24954 22117 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 91.785 2 -0.7870633717349296 0.2379482829228339 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 32621 2690 GHFEVFYWTH True NCI_RA007_Epitope_Rep2 1321.58800689893 1321.58635490379 14.689 3 -0.7870679161193453 0.2379482829228339 1.0 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5', 'nc|ENSG00000290203|Q96PH1-5|NOX5', 'ENST00000527315.5_1_15:69323805-69349033:+|nuORF'] 46389 14662 ITIFPESLQP True H1975_Epitope_Rep2 1143.6175756917098 1143.61646993586 61.558 2 -0.7871182582650406 0.23795942842935078 1.0 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 14375 4656 DTEKSRFFRFC True NCI_RA007_Epitope_Rep2 1434.6714192530599 1434.67032993586 22.736 2 -0.7871375355017197 0.23796779713069802 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 134429 8962 WTHFHHANGIL True NCI_RA007_Epitope_Rep3 1331.65233849099 1331.65069490379 42.345 3 -0.78717498090102 0.23796779713069802 1.0 ['ENST00000271277.10_1_1:112938840-112954920:+|nuORF'] 88766 11689 RDHIVLEL True PC9_epitope_Rep1 993.5607295219299 993.55962993586 49.838 2 -0.7871868102145815 0.23796779713069802 1.0 ['ENST00000527754.1_1_11:129698120-129727360:+|nuORF', 'ENSG00000151715|ENST00000281441|TMEM45B'] 16699 10605 EEVLINKK True H1975_Epitope_Rep1 971.56514619603 971.56404993586 45.746 2 -0.7872037941103298 0.23796779713069802 1.0 ['ENST00000504733.1_1_3:130546621-130547209:+|nuORF'] 71586 23490 MLFTIHPVDG True NCI_RA007_Epitope_Rep5 1128.56376629704 1128.56212490379 97.66 3 -0.7872266251845982 0.23796779713069802 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 71578 11263 MLEWQFQK True H1975_Epitope_Rep1 1108.5375515491999 1108.5364499358602 48.299 2 -0.7872387475445048 0.23796779713069802 1.0 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 62318 15413 LLRDGETL True PC9_epitope_Rep4 915.50254593947 915.50144993586 67.218 2 -0.7872636936924907 0.23800818952910208 1.0 ['ENSG00000102024|ENST00000355899|PLS3', 'nc|ENSG00000102024|P13797-2|PLS3', 'nc|ENSG00000102024|P13797-3|PLS3'] 8400 9505 ATQEVKEITC[Carbamidomethyl]R True H1975_Epitope_Rep1 1333.6659997988797 1333.6649099358601 41.481 2 -0.7872690502467328 0.23801237149583962 1.0 ['GGCT|p.G117V|1|0.23|ENSG00000006625|chr7:30498876-30498876|C/A|missense_variant'] 123589 27644 VIKFLIIIA True PC9_epitope_Rep4 1028.6997891940398 1028.69868993586 119.35 2 -0.7872887454227826 0.23801237149583962 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 123909 24420 VKIKIKAEIKK True NCI_RA007_Epitope_Rep3 1296.8856924707595 1296.88458993586 105.69 2 -0.7872992558335978 0.23801237149583962 1.0 ['L1P4_dup2393|chr10:47974237-47974904:-|1.0496562154306903|0.1836211835218236|2.52|474.0|3|1|sense'] 63826 9286 LPTANLTN True PC9_epitope_Rep3 842.4497820906201 842.44868993586 40.66 2 -0.7873219075596378 0.23804579884771737 1.0 ['nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENST00000517348.1_1_7:39125465-39413102:+|nuORF'] 48419 6990 KEDQTEYLEER True H1975_Epitope_Rep1 1438.65760258038 1438.6565099358602 31.924 2 -0.7873293336089723 0.23804579884771737 1.0 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 120047 7942 VFETPEAQP True H1975_Epitope_Rep1 1016.4814761417199 1016.48036993586 35.498 2 -0.7873479499386198 0.23804579884771737 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'PCDH10|p.A996T|1|0.29|ENSG00000138650|chr4:133163165-133163165|G/A|missense_variant', 'ENST00000511112.2_1_4:134084133-134129298:+|nuORF'] 84580 6950 QHDKLNLGPAI True H1975_Epitope_Rep2 1204.6564208119198 1204.6553299358602 31.653 2 -0.7874824761634202 0.23810080863321975 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 119863 17037 VEVSLGLPAL True PC9_epitope_Rep4 996.5855472874398 996.58444993586 73.524 2 -0.7875362315222031 0.2381411943615839 1.0 ['ENST00000441394.1_1_13:30881052-30881121:-|nuORF'] 99843 11359 SLHAPTGKTL True PC9_epitope_Rep4 1023.57129420563 1023.57018993586 51.467 2 -0.7876125496935766 0.23817809621289662 1.0 ['ENSG00000174948|ENST00000389740|GPR149', 'GPR149|p.V558M|1|0.12|ENSG00000174948|chr3:154338223-154338223|C/T|missense_variant'] 36637 10185 GVLPGGHL True PC9_epitope_Rep3 748.42317341996 748.42206993586 44.129 2 -0.7876215649438597 0.23817809621289662 1.0 ['ENST00000530254.6_1_17:27426730-27430635:-|nuORF'] 58661 17154 LFHLQRAGHN True H1975_Epitope_Rep2 1191.6261237431497 1191.62446490379 71.264 3 -0.7876551934006242 0.2381787876129485 1.0 ['ENSG00000139131|ENST00000324868|YARS2'] 45582 10028 ISGLQDEL True H1975_Epitope_Rep1 873.4443623570099 873.44326993586 43.511 2 -0.7876660598701 0.2381787876129485 1.0 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'ENST00000482343.5_1_1:149901023-149901224:-|nuORF'] 71112 9936 METRKQLHLTR True PC9_epitope_Rep2 1411.7718020006698 1411.77016490379 43.549 3 -0.7876662833795446 0.2381787876129485 1.0 ['ENST00000304920.3_1_13:21296082-21296283:+|nuORF'] 100051 17002 SLKMWFVFR True PC9_epitope_Rep1 1212.6477707045199 1212.64666993586 70.221 2 -0.787672259500125 0.2381787876129485 1.0 ['nc|ENSG00000132437|P20711-3|DDC', 'ENSG00000132437|ENST00000444124|DDC', 'nc|ENSG00000132437|P20711-4|DDC'] 136117 12415 YGETWHKGGIL True PC9_epitope_Rep6 1259.6298717109098 1259.6287699358602 59.182 2 -0.7877103751923669 0.23819199789495227 1.0 ['ENSG00000085377|ENST00000652536|PREP'] 3020 20851 AFRRRRWRRR True NCI_RA007_Epitope_Rep5 1514.9031824964597 1514.9015249037902 87.198 3 -0.7877151292585471 0.23819199789495227 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 56731 8611 LEAKFHKE True NCI_RA007_Epitope_Rep1 1000.5341804209199 1000.53308993586 37.496 2 -0.787728289064542 0.23819199789495227 1.0 ['AMPH|p.P575Rfs*35|1|0.39|ENSG00000078053|chr7:38391902-38391902|G/-|frameshift_variant', 'AMPH|p.A221E|1|0.33|ENSG00000078053|chr7:38466177-38466177|G/T|missense_variant', 'nc|ENSG00000078053|P49418-2|AMPH', 'ENSG00000078053|ENST00000356264|AMPH'] 140063 27892 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 115.01 3 -0.7877305358025458 0.23819199789495227 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 58564 8846 LFEEDNLLR True PC9_epitope_Rep1 1147.5873381925899 1147.58569490379 38.868 3 -0.7877501826655758 0.23819199789495227 1.0 ['nc|ENSG00000132561|O00339-3|MATN2', 'nc|ENSG00000132561|O00339-2|MATN2', 'ENSG00000132561|ENST00000254898|MATN2', 'MATN2-C8orf47|3|fusion', 'MATN2-C8orf47|2|fusion', 'nc|ENSG00000132561|O00339-4|MATN2', 'ENST00000523561.1_1_8:99044328-99047937:+|nuORF'] 3019 20764 AFRRRRWRRR True NCI_RA007_Epitope_Rep5 1514.9031824964597 1514.9015249037902 86.843 3 -0.7877894262720435 0.23819199789495227 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 14226 3727 DSYLKYVGWTM True NCI_RA007_Epitope_Rep2 1361.6325741328496 1361.63092490379 19.139 3 -0.7878027441374827 0.23819199789495227 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant'] 82700 17935 PVPEYIKGF True PC9_epitope_Rep1 1048.5593325395998 1048.55822993586 73.778 2 -0.7878460005262681 0.23819199789495227 1.0 ['ENSG00000278053|ENST00000617633|DDX52'] 123863 24680 VKAKKKKKKKK True NCI_RA007_Epitope_Rep3 1340.9707595073994 1340.96966993586 106.73 2 -0.7878498806256458 0.23819199789495227 1.0 ['ENSG00000189134|ENST00000343684|NKAPL'] 3018 20677 AFRRRRWRRR True NCI_RA007_Epitope_Rep5 1514.9031824964597 1514.9015249037902 86.492 3 -0.787862886136092 0.23819199789495227 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 14372 4185 DTEKSRFFRFC True H1975_Epitope_Rep3 1434.6714192530599 1434.67032993586 21.216 2 -0.7878789798340214 0.23819199789495227 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 68566 12136 LTWSRESPL True H1975_Epitope_Rep2 1087.56620882519 1087.5651099358602 51.765 2 -0.7879042321019216 0.23819199789495227 1.0 ['ENST00000565089.5_1_16:28943294-28944055:+|nuORF', 'CD19|p.P204Lfs*23|1|0.35|ENSG00000177455|chr16:28933281-28933281|C/-|frameshift_variant', 'ENSG00000177455|ENST00000538922|CD19', 'nc|ENSG00000177455|P15391-2|CD19'] 34681 11258 GQLHYSVP True PC9_epitope_Rep2 899.45011644379 899.44900993586 48.629 2 -0.7879060128936561 0.23819199789495227 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'PCDHA13|p.R619Hfs*37|1|0.2|ENSG00000239389|chr5:140884118-140884119|GC/-|frameshift_variant', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13', 'PCDHA9|p.Y421Tfs*28|1|0.23|ENSG00000204961|chr5:140849754-140849754|C/-|frameshift_variant', 'PCDHA8|p.E38D|1|0.4|ENSG00000204962|chr5:140841435-140841435|G/C|missense_variant', 'PCDHA7|p.G27E|1|0.21|ENSG00000204963|chr5:140834463-140834463|G/A|missense_variant', 'PCDHA7|p.E38K|1|0.67|ENSG00000204963|chr5:140834495-140834495|G/A|missense_variant', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'PCDHA7|p.S632Afs*6|1|0.5|ENSG00000204963|chr5:140836276-140836276|C/-|frameshift_variant', 'nc|ENSG00000204963|Q9UN72-2|PCDHA7', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000204961|Q9Y5H5-2|PCDHA9'] 133402 15359 WFRRFRQRLHP True NCI_RA007_Epitope_Rep2 1597.8854667436497 1597.8843699358601 64.441 2 -0.7879431094481655 0.23820313413635832 1.0 ['ENST00000243918.9_1_20:43991669-43991846:+|nuORF'] 62864 9865 LMPTELAAL True PC9_epitope_Rep2 957.5205045027299 957.51940993586 43.28 2 -0.7880040828380037 0.2382288880118113 1.0 ['ENST00000477908.1_1_1:109358795-109359618:-|nuORF'] 118992 12486 VEFKAQDTI True NCI_RA007_Epitope_Rep5 1049.53932537101 1049.53822993586 54.684 2 -0.7880953669366335 0.23828387662622424 1.0 ['RPS6KC1|p.K880Ffs*6|1|0.26|ENSG00000136643|chr1:213242113-213242120|CAAGGAAA/TTT|frameshift_variant', 'nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1'] 114983 16026 TTISRFEAL True PC9_epitope_Rep1 1036.5553097883198 1036.5542099358602 66.456 2 -0.7881247222320766 0.23829152780213997 1.0 ['nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000028277|P09086-4|POU2F2', 'ENST00000559648.1_1_1:167358914-167365774:+|nuORF', 'nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1', 'nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3', 'ENST00000533620.5_1_11:120169092-120189098:+|nuORF'] 27389 10797 FNDGNAAVV True PC9_epitope_Rep1 905.4242956187699 905.42374496793 46.418 1 -0.7881267403201642 0.23829152780213997 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 134402 4563 WTALHHAA True PC9_epitope_Rep3 905.4507851501301 905.44968993586 22.643 2 -0.7881400634318275 0.23831031206606737 1.0 ['ENSG00000089847|ENST00000318934|ANKRD24', 'nc|ENSG00000089847|Q8TF21-2|ANKRD24'] 56424 9660 LDSIKMGQYK True H1975_Epitope_Rep3 1181.6114447654502 1181.61034993586 42.176 2 -0.788144225676393 0.23831031206606737 1.0 ['ENSG00000080224|ENST00000389672|EPHA6', 'nc|ENSG00000080224|Q9UF33|EPHA6'] 59396 11495 LGLLSQAIVP True H1975_Epitope_Rep1 1009.6171817688898 1009.61608993586 49.2 2 -0.7881453309686685 0.23831031206606737 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'ENST00000474871.5_1_3:132405102-132413706:-|nuORF', 'nc|ENSG00000113971|Q7Z494-2|NPHP3', 'ENST00000471702.2_2_3:132363653-132416205:-|nuORF'] 115083 13292 TTTNYLIE True NCI_RA007_Epitope_Rep4 953.4705771048499 953.47002496793 58.267 1 -0.7882628858721421 0.2383506782039289 1.0 ['ENSG00000151694|ENST00000310823|ADAM17', 'nc|ENSG00000151694|P78536-2|ADAM17'] 58256 3752 LETAGVAR True H1975_Epitope_Rep1 815.45011644379 815.44900993586 18.966 2 -0.7882767207322054 0.238361810661093 1.0 ['ENST00000473515.5_1_6:108067761-108070999:-|nuORF'] 69890 5531 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep5 1442.6356288295895 1442.6345299358602 27.962 2 -0.7883079653775636 0.2383701386960525 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 58110 7081 LERVFSPQEL True PC9_epitope_Rep6 1216.6451874218799 1216.6435349037902 36.273 3 -0.7883336016582323 0.2383701386960525 1.0 ['nc|ENSG00000113073|Q96Q91|SLC4A9', 'nc|ENSG00000113073|Q96Q91-4|SLC4A9', 'nc|ENSG00000113073|Q96Q91-2|SLC4A9', 'ENSG00000113073|ENST00000506757|SLC4A9'] 61070 5427 LLAVSHVG True PC9_epitope_Rep2 794.46503823194 794.46394993586 26.268 2 -0.7883994217483185 0.2383701386960525 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 38952 23057 HIRWQTAVF True PC9_epitope_Rep2 1156.61416207712 1156.61306993586 94.18 2 -0.7884002513263245 0.2383701386960525 1.0 ['ENSG00000012174|ENST00000379484|MBTPS2', 'MBTPS2|p.P47H|1|0.11|ENSG00000012174|chrX:21843234-21843234|C/A|missense_variant'] 21188 3549 ERERHRHRD True H1975_Epitope_Rep2 1289.64496169477 1289.64331490379 18.531 3 -0.7884027722644121 0.2383701386960525 1.0 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'DROSHA|p.G921Vfs*23|2|0.17|ENSG00000113360|chr5:31449340-31449341|-/A|frameshift_variant'] 29883 16069 FVYGEPREL True PC9_epitope_Rep6 1108.5553097883198 1108.5542099358602 74.136 2 -0.7884269997689834 0.2383701386960525 1.0 ['ENSG00000046774|ENST00000247452|MAGEC2'] 76458 3419 NTCCFCCC True PC9_epitope_Rep3 895.2155084297899 895.21440993586 18.279 2 -0.7884660446633295 0.23839240043843624 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 140062 28613 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 119.63 3 -0.7884681442876382 0.23839240043843624 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 114117 12244 TRRTGWRRRRR True H1975_Epitope_Rep3 1555.9144754561496 1555.9128149037901 52.271 3 -0.7884896201269729 0.23840353082161753 1.0 ['nc|ENSG00000149177|Q12913-3|PTPRJ'] 19804 18108 ELTLWLLK True PC9_epitope_Rep2 1014.6113681124599 1014.61026993586 74.955 2 -0.7885113822877646 0.2384146608794774 1.0 ['ENST00000566814.1_1_22:26909701-26909914:+|nuORF'] 138160 5470 YQNARDLLN True NCI_RA007_Epitope_Rep5 1105.55162139021 1105.5505299358601 27.726 2 -0.7885654181750439 0.23841949907940496 1.0 ['nc|ENSG00000057294|Q99959|PKP2', 'ENSG00000057294|ENST00000340811|PKP2'] 63455 17828 LPGVSLVSG True PC9_epitope_Rep1 827.47526856247 827.47472496793 73.369 1 -0.788584315108762 0.23841949907940496 1.0 ['ENST00000597852.5_1_19:49838763-49839342:+|nuORF'] 105210 6579 STQDLPCM[Oxidation]IWP True H1975_Epitope_Rep2 1305.5733453850098 1305.57224993586 30.217 2 -0.7885941603215717 0.23841949907940496 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2'] 79937 11028 PIREKEVT True PC9_epitope_Rep4 970.5447451046199 970.54364993586 50.196 2 -0.788628195295914 0.23841949907940496 1.0 ['ENSG00000102302|ENST00000375135|FGD1'] 37719 5302 HARTHSGERPY True H1975_Epitope_Rep3 1309.6275802951297 1309.62592490379 25.473 3 -0.788629851225343 0.23841949907940496 1.0 ['nc|ENSG00000174652|Q14584|ZNF266', 'ENSG00000174652|ENST00000592904|ZNF266'] 15620 20841 EAVRRAFRV True NCI_RA007_Epitope_Rep2 1102.6359601508598 1102.63486993586 86.198 2 -0.7886355366272082 0.23841949907940496 1.0 ['ENSG00000102996|ENST00000219271|MMP15', 'MMP15|p.A257Qfs*63|1|0.11|ENSG00000102996|chr16:58040556-58040556|G/-|frameshift_variant'] 25022 21710 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 88.984 2 -0.7886489202992384 0.23841949907940496 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 130081 9469 VTQLQEFL True NCI_RA007_Epitope_Rep4 976.5229470308799 976.52184993586 43.28 2 -0.7886583193202413 0.23842714360862705 1.0 ['KIF2A-IPO11|2|fusion', 'KIF2A-IPO11|1|fusion', 'ENSG00000086200|ENST00000325324|IPO11', 'nc|ENSG00000086200|Q9UI26-2|IPO11'] 140061 28432 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 118.61 3 -0.7886816173968391 0.23842714360862705 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 98177 20927 SIDLPRRKKP True PC9_epitope_Rep2 1208.73533983896 1208.7342499358601 85.943 2 -0.788700743907007 0.23843827169513568 1.0 ['nc|ENSG00000135913|Q86T82-2|USP37', 'ENSG00000135913|ENST00000258399|USP37', 'USP37|p.E875Nfs*2|1|0.27|ENSG00000135913|chr2:218459810-218459810|C/-|frameshift_variant'] 114516 17628 TSGLAKDAW True PC9_epitope_Rep5 947.47124581119 947.47014993586 72.817 2 -0.7887656576857809 0.23846401122183583 1.0 ['nc|ENSG00000010810|P06241-2|FYN'] 24994 23065 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 100.16 2 -0.7889928994704033 0.23853009935710112 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 61079 5272 LLAVSHVG True PC9_epitope_Rep6 794.46503823194 794.46394993586 28.071 2 -0.7890415613343698 0.23853009935710112 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 67533 16118 LTEMSEGEIH True H1975_Epitope_Rep3 1144.5070392665598 1144.5059499358601 67.455 2 -0.7890797943601785 0.2385377399842202 1.0 ['CON__ENSEMBL:ENSBTAP00000023402'] 129849 25495 VTLIVSVLTV True PC9_epitope_Rep2 1042.6637976081402 1042.6627099358602 103.75 2 -0.7891399805455912 0.2385377399842202 1.0 ['ENSG00000174599|ENST00000310754|TRAM1L1'] 121512 8308 VGKHCRLLYP True PC9_epitope_Rep1 1184.64883333368 1184.64772993586 36.79 2 -0.789156046384768 0.23854189495215136 1.0 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 108183 6191 TDVLATWAPP True H1975_Epitope_Rep2 1069.54441075145 1069.5433099358602 28.786 2 -0.7891637751611235 0.23854189495215136 1.0 ['ENST00000553181.5_1_2:10588860-10589010:+|nuORF'] 140060 28000 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 116.2 3 -0.7891859999391673 0.23854189495215136 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 140059 27940 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 115.87 3 -0.7892550647686145 0.23856762995646202 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 125536 12326 VLWEWNVERNK True H1975_Epitope_Rep1 1471.7571974823497 1471.7561099358602 52.44 2 -0.7892635902597334 0.23857875436469092 1.0 ['WDR12|p.L168V|2|0.11|ENSG00000138442|chr2:202896172-202896172|G/C|missense_variant'] 66749 5027 LSTSTVSQSL True PC9_epitope_Rep4 1021.52915461013 1021.5280499358599 25.964 2 -0.789322810564965 0.2386302210404827 1.0 ['SMG1|p.L1340S|1|0.1|ENSG00000157106|chr16:18859116-18859116|A/G|missense_variant'] 140058 27877 YVLVPFHDPGF True PC9_epitope_Rep3 1289.6444591458896 1289.64280490379 115.52 3 -0.7893283153453013 0.2386302210404827 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 119633 8054 VESDQKKPR True PC9_epitope_Rep6 1085.58292151849 1085.58182993586 40.471 2 -0.78943724481594 0.2386670757183971 1.0 ['ENSG00000106341|ENST00000342032|PPP1R17'] 77788 5635 PAEAERLGP True H1975_Epitope_Rep2 938.4821448480598 938.48104993586 26.674 2 -0.789451098995924 0.2386670757183971 1.0 ['nc|ENSG00000105379|P38117-2|ETFB', 'ENSG00000105379|ENST00000309244|ETFB', 'ETFB|p.D158Tfs*3|1|0.3|ENSG00000105379|chr19:51347025-51347025|C/-|frameshift_variant'] 140067 28704 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 119.46 3 -0.7894605784747359 0.23868931967919593 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 78373 6360 PATTTARL True PC9_epitope_Rep3 829.46576650793 829.46466993586 29.49 2 -0.7894742774721286 0.23868931967919593 1.0 ['ENSG00000132613|ENST00000338779|MTSS2'] 44560 9861 IPDKEAGGVP True H1975_Epitope_Rep2 981.5131106231697 981.51200993586 42.917 2 -0.7895858503939114 0.23872268318335865 1.0 ['ENST00000602865.1_1_1:2282646-2283036:-|nuORF'] 85833 3908 QMLENQMEVRK True NCI_RA007_Epitope_Rep2 1404.6853550650396 1404.6842499358602 19.835 2 -0.7896114886234255 0.23872268318335865 1.0 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 129921 14683 VTLTYFGAHF True PC9_epitope_Rep2 1154.5760452328998 1154.5744049037899 61.742 3 -0.7896162087765534 0.23872268318335865 1.0 ['nc|ENSG00000064201|Q96QS1-4|TSPAN32', 'ENST00000483227.5_1_11:2323379-2336538:+|nuORF', 'ENST00000461200.5_1_11:2323274-2335767:+|nuORF', 'ENST00000498313.5_1_11:2323379-2337620:+|nuORF', 'nc|ENSG00000064201|Q96QS1-3|TSPAN32', 'nc|ENSG00000064201|Q96QS1-5|TSPAN32', 'nc|ENSG00000064201|Q96QS1-2|TSPAN32', 'ENSG00000064201|ENST00000182290|TSPAN32'] 34455 4805 GQAVGHIP True NCI_RA007_Epitope_Rep5 777.4133370122499 777.41222993586 25.172 2 -0.7896784371753609 0.23876301912149234 1.0 ['ENST00000562866.1_1_16:89782895-89783186:+|nuORF'] 39646 9471 HPQPQGLEV True PC9_epitope_Rep5 1003.5086939490699 1003.50758993586 41.387 2 -0.7896944958630213 0.2387963774466842 1.0 ['nc|ENSG00000187720|Q6ZMP0-2|THSD4', 'ENSG00000187720|ENST00000261862|THSD4'] 114483 8059 TSFAVLMDV True H1975_Epitope_Rep1 981.4841189940099 981.48302993586 35.943 2 -0.7897045395928644 0.2387963774466842 1.0 ['ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'ENST00000489018.1_1_1:109812400-109812848:+|nuORF'] 42752 14481 IFEMLQERQP True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 60.811 3 -0.7897099406784382 0.2387963774466842 1.0 ['nc|ENSG00000002746|Q76N89-2|HECW1', 'HECW1|p.S1539Kfs*53|2|0.23|ENSG00000002746|chr7:43554695-43554696|-/A|frameshift_variant', 'ENSG00000002746|ENST00000395891|HECW1'] 99590 12945 SLFKRYRHEFK True NCI_RA007_Epitope_Rep2 1509.8204664452498 1509.81936993586 54.975 2 -0.7897487792108793 0.23879703201682637 1.0 ['nc|ENSG00000124207|P55060-4|CSE1L', 'nc|ENSG00000124207|P55060-3|CSE1L', 'ENSG00000124207|ENST00000262982|CSE1L', 'nc|ENSG00000124207|P55060-2|CSE1L'] 135831 6195 YEQHWYKDHHY True H1975_Epitope_Rep1 1604.67967543764 1604.6785699358602 28.898 2 -0.7897499690466794 0.23879703201682637 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2'] 30584 9747 GAKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 47.913 3 -0.7897867755300173 0.23879703201682637 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 19186 5598 ELKKFKLKLL True PC9_epitope_Rep1 1258.8376796491798 1258.83658993586 26.36 2 -0.789792894777163 0.23879703201682637 1.0 ['nc|ENSG00000103490|Q9ULZ3-2|PYCARD', 'ENSG00000103490|ENST00000247470|PYCARD'] 78540 9044 PDLVEINR True H1975_Epitope_Rep1 954.51344497634 954.51234993586 39.694 2 -0.7898553924207897 0.2388227561527788 1.0 ['ENSG00000162621|ENST00000294635|LRRC53'] 405 16191 AALLKHTNL True PC9_epitope_Rep3 979.5814649665101 979.58036993586 67.418 2 -0.789867640100851 0.23883387374755352 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant', 'ENST00000560983.1_1_15:64010754-64015453:-|nuORF'] 101035 19210 SLTLERWYVAP True PC9_epitope_Rep3 1333.7030366511701 1333.70192993586 79.11 2 -0.7899258051118363 0.2388595965939796 1.0 ['ENSG00000136881|ENST00000259407|BAAT'] 73381 3412 NEQRWRWIFRS True NCI_RA007_Epitope_Rep1 1576.8011279829996 1576.7994749037903 17.172 3 -0.7900209920293824 0.23894025033226715 1.0 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8'] 93210 24405 RRRRRPHLP True NCI_RA007_Epitope_Rep3 1242.76462333498 1242.76352993586 105.63 2 -0.7900222237284964 0.23894025033226715 1.0 ['ENST00000397558.6_2_12:120427683-120428022:+|nuORF'] 20436 12724 EPQVELRPR True PC9_epitope_Rep5 1122.6145559999397 1122.6134499358602 53.95 2 -0.7900539668233857 0.2389513655615598 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 90105 18596 RGRKGQRSLT True NCI_RA007_Epitope_Rep4 1157.6741365647297 1157.67302993586 80.436 2 -0.7901101083959801 0.23896028037383177 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 16088 9729 EEDLDYYL True PC9_epitope_Rep4 1058.44442192666 1058.4433299358602 45.061 2 -0.7901597468051873 0.23896028037383177 1.0 ['ENSG00000146063|ENST00000315073|TRIM41', 'nc|ENSG00000146063|Q8WV44-4|TRIM41', 'ENST00000508930.1_1_5:180650987-180660460:+|nuORF', 'nc|ENSG00000146063|Q8WV44-2|TRIM41', 'TRIM41|p.E163Afs*155|1|0.09|ENSG00000146063|chr5:181224486-181224511|GAGGATCTAGACCCCGTCACCCCACT/-|frameshift_variant'] 140136 25058 YVRPLLRG True PC9_epitope_Rep5 972.5868847001198 972.58578993586 101.52 2 -0.7901613921226304 0.23896028037383177 1.0 ['ENSG00000283632|ENST00000413988|EXOC3L2', 'nc|ENSG00000283632|Q2M3D2|EXOC3L2'] 109806 25402 THKRIHIG True PC9_epitope_Rep2 960.5617325814399 960.5611849679301 103.39 1 -0.7901635162423358 0.23896028037383177 1.0 ['ENSG00000213988|ENST00000418063|ZNF90'] 93494 9401 RSKFLQSDTYK True H1975_Epitope_Rep3 1371.7146639640298 1371.71356993586 41.162 2 -0.7901670243295191 0.23896028037383177 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2', 'ENST00000460924.6_1_11:112046255-112064455:+|nuORF', 'ENSG00000197580|ENST00000357685|BCO2', 'ENST00000525987.5_1_11:111959732-112064455:+|nuORF', 'nc|ENSG00000197580|Q9BYV7-4|BCO2', 'nc|ENSG00000197580|Q9BYV7-2|BCO2', 'nc|ENSG00000197580|Q9BYV7-6|BCO2'] 79147 4534 PGASENILGW True NCI_RA007_Epitope_Rep2 1042.5083595958997 1042.5072699358602 22.264 2 -0.7901684586941807 0.23896028037383177 1.0 ['nc|ENSG00000144645|Q9BXB5-2|OSBPL10', 'ENSG00000144645|ENST00000396556|OSBPL10'] 110876 8392 TLAENCPRFWQ True NCI_RA007_Epitope_Rep1 1363.6343054683498 1363.6332099358601 36.644 2 -0.7901838772798966 0.23896028037383177 1.0 ['ENST00000394586.6_1_14:66028378-66028441:+|nuORF'] 103964 12027 SRQRPQMKV True NCI_RA007_Epitope_Rep3 1128.6185958345598 1128.61693490379 54.433 3 -0.790205917446741 0.23896028037383177 1.0 ['ENSG00000092470|ENST00000263795|WDR76', 'WDR76|p.L377Vfs*5|1|0.11|ENSG00000092470|chr15:43851183-43851184|CT/-|frameshift_variant', 'ENST00000381246.6_1_15:44119194-44120163:+|nuORF'] 133623 856 WKERILKAK True PC9_epitope_Rep1 1170.7237125260997 1170.7220549037902 4.7444 3 -0.790212880845479 0.23896028037383177 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'ENST00000409014.5_1_14:69676187-69676861:+|nuORF', 'ENST00000492815.5_1_14:69676187-69701514:+|nuORF'] 105247 5015 STSPRRPLQS True NCI_RA007_Epitope_Rep2 1127.60471959223 1127.60362993586 24.13 2 -0.7902444290069144 0.23896028037383177 1.0 ['ENST00000392508.2_1_12:120933958-120934215:+|nuORF', 'ENST00000550178.1_1_12:120933958-120934105:+|nuORF', 'ENST00000242577.10_1_12:120933958-120935883:+|nuORF'] 65732 11070 LSHWKRSLF True PC9_epitope_Rep2 1172.6454622054 1172.6438249037901 47.899 3 -0.7902694545630983 0.23898599611571092 1.0 ['ENST00000369847.3_2_10:105086334-105104817:-|nuORF'] 58257 3688 LETAGVAR True NCI_RA007_Epitope_Rep4 815.45011644379 815.44900993586 20.297 2 -0.7902939587097755 0.23899710872930113 1.0 ['ENST00000473515.5_1_6:108067761-108070999:-|nuORF'] 30579 3875 GAKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 21.086 3 -0.7904350164635445 0.23903044462291012 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 119854 21099 VEVRDYKRLTP True PC9_epitope_Rep3 1374.7619485096195 1374.76084993586 86.44 2 -0.7904485169991832 0.23903044462291012 1.0 ['ENSG00000156502|ENST00000359655|SUPV3L1', 'SUPV3L1|p.F536Lfs*2|1|0.32|ENSG00000156502|chr10:69202871-69202871|T/-|frameshift_variant'] 11051 7068 DDNGDDDDDFF True PC9_epitope_Rep5 1288.4003848381997 1288.39928993586 32.155 2 -0.790458799069521 0.23903044462291012 1.0 ['WASHC2C|p.D455N|1|0.19|ENSG00000172661|chr10:45755058-45755058|G/A|missense_variant'] 91319 26363 RMGPPVGG True H1975_Epitope_Rep2 769.3904933926899 769.3899449679301 108.48 1 -0.7905080008829676 0.23904155593843998 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000595164.5_1_19:39327364-39331218:-|nuORF', 'ENST00000597731.1_1_19:39327364-39331218:-|nuORF', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 61073 5875 LLAVSHVG True PC9_epitope_Rep2 794.46503823194 794.46394993586 27.993 2 -0.790599692995674 0.23911519929916777 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 18124 15711 EILTVLRRVD True H1975_Epitope_Rep2 1212.7190210684798 1212.7173749037902 65.6 3 -0.7906046285446755 0.23911519929916777 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 52267 14794 KNQMYDDYYYY True H1975_Epitope_Rep2 1564.61804626752 1564.61694993586 62.063 2 -0.7906447412465933 0.23911519929916777 1.0 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 85768 8808 QLVTHLHRVVS True H1975_Epitope_Rep1 1287.7411534953903 1287.74004993586 38.807 2 -0.7906605642439788 0.23911519929916777 1.0 ['BHLHE40|p.G214Vfs*93|1|0.16|ENSG00000134107|chr3:4983093-4983093|G/-|frameshift_variant', 'ENSG00000134107|ENST00000256495|BHLHE40'] 70732 12511 MEAISWQAS True H1975_Epitope_Rep2 1021.45388149489 1021.45278993586 53.216 2 -0.790688887161017 0.2391339260946374 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 49093 9581 KFYREKEGKP True NCI_RA007_Epitope_Rep4 1280.6877209401996 1280.68662993586 43.693 2 -0.7906892643372591 0.2391339260946374 1.0 ['nc|ENSG00000261371|P16284-5|PECAM1', 'nc|ENSG00000261371|P16284-3|PECAM1', 'nc|ENSG00000261371|P16284-4|PECAM1', 'nc|ENSG00000261371|P16284-2|PECAM1', 'nc|ENSG00000261371|P16284-6|PECAM1', 'ENSG00000261371|ENST00000563924|PECAM1'] 72846 8983 NALWTFCF True H1975_Epitope_Rep3 1000.4476739156399 1000.4471749679301 39.549 1 -0.7906911017910527 0.2391339260946374 1.0 ['ENST00000368073.7_1_1:160187265-160187343:-|nuORF'] 10298 9372 CHDGDETI True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 42.69 2 -0.7907598709244348 0.23915963442053317 1.0 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 109807 25496 THKRIHIG True PC9_epitope_Rep2 960.5617325814399 960.5611849679301 103.75 1 -0.7908357894105079 0.2391853419957661 1.0 ['ENSG00000213988|ENST00000418063|ZNF90'] 5559 6103 ANKQDQQDPK True PC9_epitope_Rep1 1170.5629143498998 1170.56125490379 28.289 3 -0.7910110413682838 0.23926944639103012 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B', 'nc|ENSG00000288701|Q5JSZ5-5|PRRC2B'] 133857 21861 WMALLLDQET True H1975_Epitope_Rep2 1218.59546034814 1218.59380490379 90.402 3 -0.7911037922553604 0.2393243499715316 1.0 ['ENSG00000170927|ENST00000371117|PKHD1', 'PKHD1|p.Y3352Ifs*22|1|0.62|ENSG00000170927|chr6:51744487-51744488|-/T|frameshift_variant', 'nc|ENSG00000170927|P08F94-2|PKHD1'] 82256 19948 PTLLWFRDGKK True H1975_Epitope_Rep1 1359.7663056140698 1359.7652099358602 83.024 2 -0.7911283994368061 0.2393319610505263 1.0 ['nc|ENSG00000239264|Q8NBS9-2|TXNDC5', 'ENSG00000239264|ENST00000379757|TXNDC5'] 125363 11241 VLSREGGL True PC9_epitope_Rep2 829.4657665079299 829.46466993586 48.565 2 -0.791154444197294 0.2393319610505263 1.0 ['ENST00000261205.8_1_12:79258472-79371593:+|nuORF'] 135987 19810 YFFNGPIQFEY True PC9_epitope_Rep3 1423.6448530687098 1423.6437499358601 81.433 2 -0.7912802419070553 0.23937226277372262 1.0 ['ENSG00000137745|ENST00000260302|MMP13'] 120408 8050 VFSSGGIL True PC9_epitope_Rep1 778.4225047136199 778.42140993586 35.786 2 -0.7913354352503114 0.2394125633202435 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-2|SLC9B1'] 61071 5609 LLAVSHVG True PC9_epitope_Rep2 794.46503823194 794.46394993586 26.96 2 -0.7913563802753195 0.23942366646229307 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 42036 10969 IEDYDVIAS True PC9_epitope_Rep5 1023.4760564081099 1023.4749499358601 47.181 2 -0.7913790496657693 0.2394347692801775 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 2851 4804 AEWCEFTP True H1975_Epitope_Rep1 981.3902186091699 981.38912993586 23.547 2 -0.7915017817502106 0.23946458026187106 1.0 ['ENSG00000168907|ENST00000397272|PLA2G4F', 'nc|ENSG00000168907|Q68DD2-3|PLA2G4F'] 1640 9383 AEGAAKEEPKR True H1975_Epitope_Rep3 1184.6149499227597 1184.6138499358601 41.093 2 -0.7915048792782772 0.23946458026187106 1.0 ['ENST00000482192.5_1_21:40719403-40720548:-|nuORF', 'ENST00000489072.5_1_21:40717866-40720548:-|nuORF', 'ENST00000471260.1_1_21:40719749-40720542:-|nuORF', 'ENST00000486741.5_1_21:40720139-40720924:-|nuORF', 'ENSG00000205581|ENST00000380749|HMGN1', 'ENST00000479586.5_1_21:40719749-40720924:-|nuORF'] 112028 4823 TLSTVQLAA True NCI_RA007_Epitope_Rep5 902.5072969667399 902.50618993586 25.238 2 -0.7915084553431853 0.23946458026187106 1.0 ['ENSG00000066735|ENST00000423312|KIF26A', 'KIF26A|p.P954Hfs*31|1|0.2|ENSG00000066735|chr14:104175645-104175645|C/-|frameshift_variant'] 133587 15991 WIFWKTWIFWK True NCI_RA007_Epitope_Rep2 1639.8703767597897 1639.86926993586 66.918 2 -0.7915091896458716 0.23946458026187106 1.0 ['nc|ENSG00000288642|P51861|CDR1'] 16549 6575 EEQIARKEEEL True H1975_Epitope_Rep3 1372.6834234053997 1372.68178490379 30.246 3 -0.7915691456257463 0.23947568167221348 1.0 ['ENSG00000118898|ENST00000345988|PPL'] 99873 5494 SLHHRPLGP True H1975_Epitope_Rep3 1012.5566472009998 1012.55554993586 26.187 2 -0.7916151479276333 0.23949438776254908 1.0 ['ENST00000594089.1_1_11:64546495-64546588:+|nuORF'] 124035 9618 VKNKVKKHKK True NCI_RA007_Epitope_Rep5 1235.8190098932698 1235.81737490379 43.638 3 -0.791616631571167 0.23949438776254908 1.0 ['nc|ENSG00000092853|Q9HAW4-2|CLSPN', 'nc|ENSG00000092853|Q9HAW4-3|CLSPN', 'ENSG00000092853|ENST00000318121|CLSPN'] 135652 3421 YEFIYKHQQK True NCI_RA007_Epitope_Rep1 1382.6982856239 1382.69665490379 17.206 3 -0.7916733143915501 0.23949438776254908 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'nc|ENSG00000173821|Q63HN8-5|RNF213', 'ENST00000573548.1_1_17:78263625-78265730:+|nuORF'] 96907 7280 SETKDADWSV True H1975_Epitope_Rep3 1136.4985827578398 1136.4974899358601 32.977 2 -0.7916940728482522 0.2394950010946508 1.0 ['ENST00000388833.7_1_16:67841261-67854833:+|nuORF', 'ENST00000568990.5_1_16:67840937-67854833:+|nuORF'] 72997 4479 NDAPQFLEK True NCI_RA007_Epitope_Rep5 1060.5189242795998 1060.5178299358602 23.879 2 -0.7917150200715775 0.2394950010946508 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'RGS22|p.K902Nfs*4|1|0.26|ENSG00000132554|chr8:100002282-100002286|TAGAT/-|frameshift_variant', 'RGS22|p.P235Qfs*30|1|0.33|ENSG00000132554|chr8:100066187-100066187|G/-|frameshift_variant', 'nc|ENSG00000132554|Q8NE09-2|RGS22', 'RGS22|p.L146Ifs*37|1|0.28|ENSG00000132554|chr8:100071527-100071528|-/T|frameshift_variant'] 85350 19568 QLDLNRSRA True PC9_epitope_Rep1 1071.57850484439 1071.57740993586 80.093 2 -0.7917178606376684 0.2394950010946508 1.0 ['ENST00000568299.2_1_16:34480765-34481439:-|nuORF'] 3582 8312 AGPEVAAQL True PC9_epitope_Rep5 854.4497820906199 854.44868993586 36.91 2 -0.7917472133528107 0.2394950010946508 1.0 ['ENSG00000185453|ENST00000614654|ZSWIM9', 'nc|ENSG00000185453|Q86XI8|ZSWIM9'] 96525 9989 SELLIHWEN True H1975_Epitope_Rep1 1139.5611234447501 1139.56002993586 43.357 2 -0.7917662072531806 0.23950610076478487 1.0 ['ENST00000485671.1_1_X:104993011-105009296:+|nuORF'] 80210 11459 PLAIVDQR True PC9_epitope_Rep5 910.5236157372199 910.52250993586 49.076 2 -0.7918155592262759 0.23957557978311952 1.0 ['ENSG00000152661|ENST00000282561|GJA1'] 69428 14769 LVRLPGLA True PC9_epitope_Rep4 837.5436229058099 837.54252993586 64.742 2 -0.7918553048209682 0.239612370291452 1.0 ['ENST00000269321.11_1_17:79826145-79826631:-|nuORF'] 90775 15557 RKRQQRRFFKH True H1975_Epitope_Rep1 1585.9178295010897 1585.91672993586 65.12 2 -0.7919337446419531 0.239612370291452 1.0 ['ENST00000288344.14_1_21:40717793-40720258:-|nuORF'] 121456 14325 VGIMMIII True PC9_epitope_Rep4 888.51766805176 888.51656993586 63.003 2 -0.7919717604629591 0.23962346760070052 1.0 ['ENSG00000085365|ENST00000621999|SCAMP1'] 16664 6555 EETLDEGPP True H1975_Epitope_Rep3 985.4240208352498 985.42292993586 30.176 2 -0.7919826502218733 0.23963456458603932 1.0 ['ENSG00000100442|ENST00000396062|FKBP3'] 111148 20018 TLERWYAI True PC9_epitope_Rep3 1050.54983048506 1050.5487299358601 82.247 2 -0.7920396436601065 0.23966025510055164 1.0 ['nc|ENSG00000165409|P16473|TSHR', 'ENSG00000165409|ENST00000298171|TSHR'] 39287 14114 HLPTERFSPVR True PC9_epitope_Rep3 1337.7204180508102 1337.71876490379 59.374 3 -0.79206218035446 0.23967135122513608 1.0 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000488337.5_1_11:116730256-116740867:-|nuORF'] 107940 16960 TAYDLSSVI True NCI_RA007_Epitope_Rep2 967.48622716899 967.4856749679301 70.708 1 -0.7920970611648465 0.23971163388010042 1.0 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'ENST00000592516.1_1_19:11031622-11032430:+|nuORF'] 42689 8609 IEVSFYMNK True PC9_epitope_Rep4 1129.5477818797299 1129.5461249037899 40.596 3 -0.7921096804071512 0.23972272893104707 1.0 ['ENST00000475375.1_1_13:53010343-53024741:-|nuORF'] 22587 7984 ETPEEREEWTT True H1975_Epitope_Rep2 1405.5997533510897 1405.59864993586 35.659 2 -0.7921842027603596 0.23975601214102266 1.0 ['nc|ENSG00000142208|P31749-2|AKT1', 'ENSG00000142208|ENST00000649815|AKT1'] 3378 5374 AGIRWSYR True NCI_RA007_Epitope_Rep4 1007.53009809999 1007.52900993586 27.239 2 -0.7921985088833616 0.23975601214102266 1.0 ['ENST00000322157.8_1_17:45699289-45699409:+|nuORF'] 78076 6696 PALSFNQHR True NCI_RA007_Epitope_Rep2 1068.54647644012 1068.5453699358602 30.658 2 -0.7922027590370185 0.23975601214102266 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.S2410Lfs*12|1|0.26|ENSG00000197653|chr12:123867998-123867998|C/-|frameshift_variant', 'nc|ENSG00000197653|Q8IVF4-2|DNAH10'] 95501 6858 SAPGLLAAAP True H1975_Epitope_Rep2 866.4861675993399 866.48506993586 31.297 2 -0.7922124539704147 0.23976010856400753 1.0 ['ENST00000476803.1_1_1:2125492-2125609:-|nuORF'] 53034 6734 KRTQQEYYERE True NCI_RA007_Epitope_Rep5 1528.7270195528797 1528.72537490379 32.575 3 -0.7922179695630185 0.23976010856400753 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 23075 8567 EVLGHFPYP True PC9_epitope_Rep2 1057.5232813840498 1057.52218993586 38.313 2 -0.792259838524341 0.23976010856400753 1.0 ['ENSG00000090266|ENST00000247866|NDUFB2'] 130156 11968 VTRRFWPLWDP True NCI_RA007_Epitope_Rep2 1471.77245362367 1471.7713499358601 51.149 2 -0.792290109524191 0.23978579349792797 1.0 ['ENST00000583359.1_1_17:80407582-80408586:-|nuORF'] 109871 8442 THMTAIVGM-[Oxidation] True PC9_epitope_Rep2 975.4517737003499 975.45066993586 37.841 2 -0.7923104872292297 0.23978988837820092 1.0 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 115614 17710 TVIQLVGLLR True NCI_RA007_Epitope_Rep5 1110.71247913606 1110.71197496793 74.903 1 -0.7923222609797445 0.23978988837820092 1.0 ['EPHB3|p.M738L|1|0.15|ENSG00000182580|chr3:184580441-184580441|A/T|missense_variant'] 55790 12071 LDEIESLTLR True H1975_Epitope_Rep3 1187.63976768827 1187.6386699358602 51.594 2 -0.7923252907444768 0.23978988837820092 1.0 ['nc|ENSG00000090565|O75154-3|RAB11FIP3', 'ENSG00000090565|ENST00000262305|RAB11FIP3', 'nc|ENSG00000090565|O75154-2|RAB11FIP3'] 48248 4297 KDFNAFCKDLP True NCI_RA007_Epitope_Rep2 1296.6172584218798 1296.6156149037902 21.353 3 -0.7923596602100533 0.23980857334617292 1.0 ['nc|ENSG00000105971|P51636-3|CAV2'] 108464 6022 TEEPHVHSP True H1975_Epitope_Rep2 1031.4672230599099 1031.4661299358602 28.142 2 -0.7924158421468552 0.23980857334617292 1.0 ['ENST00000563642.6_1_16:1495953-1496133:-|nuORF'] 25744 10401 FFLWLRRMQA True NCI_RA007_Epitope_Rep3 1366.73323166398 1366.73158490379 47.979 3 -0.7924676678029033 0.23980857334617292 1.0 ['nc|ENSG00000228727|Q5SSQ6|SAPCD1', 'ENSG00000228727|ENST00000415669|SAPCD1'] 74365 6531 NISNHQLTQGR True H1975_Epitope_Rep1 1266.6428960060998 1266.64178993586 30.179 2 -0.7925481402449164 0.23983425494973665 1.0 ['ENSG00000077274|ENST00000324068|CAPN6'] 83000 9617 PYHAYYRHKVS True H1975_Epitope_Rep1 1419.70476798667 1419.70366993586 41.917 2 -0.7925822076900548 0.2398453457834841 1.0 ['ENSG00000099995|ENST00000215793|SF3A1', 'nc|ENSG00000099995|Q15459-2|SF3A1', 'SF3A1|p.R511Gfs*103|2|0.39|ENSG00000099995|chr22:30339001-30339001|G/-|frameshift_variant', 'ENST00000463818.1_1_22:30742246-30752805:-|nuORF'] 39282 20734 HLPLLDLLL True PC9_epitope_Rep4 1045.6535672776101 1045.6524699358602 87.918 2 -0.792627371274737 0.23986402696117765 1.0 ['ENST00000480958.1_1_17:41902775-41908980:-|nuORF'] 66379 6208 LSRATLPPP True H1975_Epitope_Rep3 950.5549158654999 950.55380993586 28.892 2 -0.7926530454500967 0.23986402696117765 1.0 ['ENST00000418115.5_1_3:49449357-49449522:-|nuORF'] 136503 9673 YHKWRIYYKKR True H1975_Epitope_Rep3 1639.9099501559897 1639.9088499358602 42.226 2 -0.7926732054874185 0.23986402696117765 1.0 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'MLXIPL|p.A789Qfs*28|1|0.14|ENSG00000009950|chr7:73594349-73594349|C/-|frameshift_variant', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL'] 137442 12992 YLNGNYLII True NCI_RA007_Epitope_Rep4 1081.58079626017 1081.5796899358602 57.073 2 -0.7927414070792492 0.23986811776033612 1.0 ['ENSG00000139209|ENST00000266579|SLC38A4'] 13656 4162 DQAFGDWLL True H1975_Epitope_Rep2 1063.4974605590298 1063.49636993586 21.11 2 -0.7927704928288763 0.23986811776033612 1.0 ['nc|ENSG00000163393|Q8IZD6-2|SLC22A15', 'ENSG00000163393|ENST00000369503|SLC22A15'] 13657 4162 DQAFGDWLL True H1975_Epitope_Rep2 1063.4974605590298 1063.49636993586 21.11 2 -0.7927704928288763 0.23986811776033612 1.0 ['nc|ENSG00000163393|Q8IZD6-2|SLC22A15', 'ENSG00000163393|ENST00000369503|SLC22A15'] 30223 7896 GAAAAPNP True H1975_Epitope_Rep1 667.32893868195 667.3283949679301 35.325 1 -0.79283890291913 0.23993756108947145 1.0 ['ENSG00000133069|ENST00000358024|TMCC2'] 61797 19633 LLKLSLSDPV True PC9_epitope_Rep1 1083.6539612004299 1083.65286993586 80.343 2 -0.792906123992055 0.23994514872572903 1.0 ['ENST00000290573.6_1_2:75061370-75061754:+|nuORF'] 87673 16602 QVDARGNILL True PC9_epitope_Rep2 1097.61930702721 1097.61820993586 69.101 2 -0.7929067803574901 0.23994514872572903 1.0 ['GABRB1|p.H364R|1|0.11|ENSG00000163288|chr4:47425684-47425684|A/G|missense_variant'] 67103 7880 LTDATKRNI True PC9_epitope_Rep6 1030.5771078620598 1030.5760099358602 39.729 2 -0.7929554501068253 0.23999649895698094 1.0 ['nc|ENSG00000101152|Q9H3Z4-2|DNAJC5', 'ENSG00000101152|ENST00000360864|DNAJC5'] 64910 8616 LSCEISLLKSE True NCI_RA007_Epitope_Rep1 1220.63223977968 1220.63114993586 37.515 2 -0.792957264039853 0.23999649895698094 1.0 ['nc|ENSG00000042813|Q9BS86-2|ZPBP', 'ENSG00000042813|ENST00000046087|ZPBP'] 36377 8535 GVHSNHAPA True NCI_RA007_Epitope_Rep5 888.42021329784 888.41910993586 39.513 2 -0.7929702106340913 0.23999708263438116 1.0 ['ENST00000301459.4_1_11:63684068-63684296:-|nuORF'] 12950 9970 DLPALPRRR True H1975_Epitope_Rep1 1092.6516102150001 1092.65050993586 43.286 2 -0.792978583696563 0.23999708263438116 1.0 ['ENST00000294484.6_2_1:11577566-11579522:+|nuORF'] 108988 9301 TEVIISLAR True H1975_Epitope_Rep1 1000.5916952970399 1000.59058993586 40.684 2 -0.7930223752400699 0.23999708263438116 1.0 ['ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1', 'ENST00000555607.1_1_14:45431624-45475488:+|nuORF', 'nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1', 'ENST00000555945.1_1_14:45431624-45465140:+|nuORF', 'TOGARAM1|p.F794Lfs*105|1|0.17|ENSG00000198718|chr14:45004102-45004102|T/-|frameshift_variant'] 66898 11853 LSWREERRREE True H1975_Epitope_Rep3 1544.7807864612398 1544.77968993586 50.74 2 -0.7930379824682404 0.23999708263438116 1.0 ['ENSG00000204438|ENST00000375896|GPANK1'] 137446 24517 YLNKILLG True NCI_RA007_Epitope_Rep2 932.5695033004799 932.56840993586 102.99 2 -0.7931491694859311 0.24002275511990198 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 38894 10849 HIIIQWTKP True NCI_RA007_Epitope_Rep4 1134.65496425994 1134.65386993586 48.58 2 -0.7931748749378361 0.24002683819775666 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 65538 9668 LSGARTFRLAP True NCI_RA007_Epitope_Rep1 1187.6774906096698 1187.67638993586 41.605 2 -0.7931889687081632 0.24002683819775666 1.0 ['ENSG00000125910|ENST00000246115|S1PR4'] 62193 21046 LLPNWRKL True PC9_epitope_Rep3 1038.6338348925399 1038.6327299358602 86.232 2 -0.7931971453019643 0.24002683819775666 1.0 ['CLDN12|p.R60Cfs*9|1|0.22|ENSG00000157224|chr7:90412854-90412855|CG/T|frameshift_variant', 'ENSG00000157224|ENST00000496677|CLDN12'] 129885 10177 VTLSLLLGG True NCI_RA007_Epitope_Rep2 871.5378688190299 871.53676993586 44.174 2 -0.7932200158500821 0.24004900745321683 1.0 ['ENSG00000182768|ENST00000379095|NGRN', 'nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 19844 17589 ELVFKAVGLAP True PC9_epitope_Rep2 1142.6699456177398 1142.6688499358602 72.935 2 -0.7932246344588074 0.24004900745321683 1.0 ['ENST00000570164.5_1_16:31500819-31501287:-|nuORF'] 33858 16779 GLVLSLEEQL True PC9_epitope_Rep6 1099.61249031127 1099.6119749679299 77.04 1 -0.7932780257495224 0.24006009159592778 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 91408 24245 RNGREPLIRGR True PC9_epitope_Rep2 1322.7643485514598 1322.76377496793 98.798 1 -0.7933454030027925 0.24009334208415373 1.0 ['chr12:6492972-6493109|118|28.23|0.25|6.83|-|1|MRPL51,None|1'] 2282 8309 AEPPDFNPRD True H1975_Epitope_Rep2 1156.5149015283198 1156.51380993586 36.912 2 -0.7933793417193541 0.24009334208415373 1.0 ['ENSG00000120436|ENST00000366834|GPR31'] 62791 23536 LMEDDEEP True H1975_Epitope_Rep1 976.36954273424 976.36844993586 97.776 2 -0.7933800729863144 0.24009334208415373 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2'] 128802 19425 VSRKLSLVP True PC9_epitope_Rep3 997.6284151589299 997.62730993586 79.944 2 -0.7934592149028251 0.24014117372535293 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-2|QRICH2'] 13171 16285 DLSYSMKDDLW True H1975_Epitope_Rep3 1371.6016679273898 1371.6005699358602 68.11 2 -0.7934697807465155 0.24014117372535293 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 140065 28456 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 118.09 3 -0.7934822062413508 0.24014117372535293 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 96689 4950 SEPGTHGEAPP True H1975_Epitope_Rep2 1077.47270236317 1077.4716099358602 24.123 2 -0.7935507239225346 0.24016683924222315 1.0 ['nc|ENSG00000253276|Q8N9Z2-2|CCDC71L'] 30560 13571 GAKELLLRDL True PC9_epitope_Rep2 1126.6710082468999 1126.66990993586 57.494 2 -0.7935983527730395 0.24017091524237297 1.0 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B'] 12988 7658 DLQARLRETW True NCI_RA007_Epitope_Rep1 1286.67313350522 1286.67148490379 33.781 3 -0.7936046365186822 0.24017091524237297 1.0 ['ENST00000588398.1_1_16:4748426-4748941:-|nuORF', 'ENST00000590803.5_1_16:4747031-4751860:-|nuORF', 'nc|ENSG00000168096|Q6ZW76-2|ANKS3', 'ENSG00000168096|ENST00000304283|ANKS3'] 138715 6395 YRWLWWQPWWW True NCI_RA007_Epitope_Rep2 1791.8462872702696 1791.84463490379 29.484 3 -0.7936224470706279 0.24017091524237297 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1', 'chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 79097 10649 PFWAWRSWCWR True PC9_epitope_Rep3 1579.7295432658698 1579.72789490379 45.908 3 -0.7936754191793544 0.24021173279671026 1.0 ['ENST00000394697.6_1_16:50322145-50324440:+|nuORF'] 42938 10716 IFYYYRSHEDK True NCI_RA007_Epitope_Rep2 1519.7095785835897 1519.7084899358601 46.281 2 -0.7937337112393251 0.24021173279671026 1.0 ['ENSG00000054690|ENST00000329153|PLEKHH1', 'nc|ENSG00000054690|Q9ULM0-2|PLEKHH1', 'ENST00000558981.5_1_14:68038444-68042282:+|nuORF'] 10380 7328 CKLPGAFCFPG True NCI_RA007_Epitope_Rep4 1138.53035799378 1138.5292699358602 34.826 2 -0.7937496130597197 0.24021173279671026 1.0 ['ENST00000567351.5_2_17:73997368-73998786:+|nuORF'] 81421 13085 PQAPTLPTTAP True PC9_epitope_Rep4 1092.58152453616 1092.5804299358601 58.223 2 -0.7937539116179889 0.24021173279671026 1.0 ['ENSG00000179846|ENST00000686631|NKPD1'] 68731 6161 LVDGREALW True NCI_RA007_Epitope_Rep2 1057.55564414149 1057.5545499358602 28.573 2 -0.7937870211852498 0.24021173279671026 1.0 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF'] 64492 15061 LQWDLCTGL True PC9_epitope_Rep1 1047.50591706775 1047.50480993586 62.751 2 -0.7938292435722217 0.24022281198051854 1.0 ['ENST00000377044.8_2_9:74319663-74324196:-|nuORF'] 57371 19452 LEHGLYGEGF True PC9_epitope_Rep5 1120.5189242795998 1120.5178299358602 79.872 2 -0.793849234249895 0.24023389084121963 1.0 ['ENST00000403633.6_1_7:99017160-99017205:+|nuORF'] 91170 10836 RLPTPEQI True PC9_epitope_Rep1 952.5341804209199 952.53308993586 46.568 2 -0.7938922548865415 0.24023502996194615 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 68056 13954 LTNLKERKEER True H1975_Epitope_Rep1 1414.7892258866198 1414.78812993586 58.829 2 -0.7939479642071532 0.24023502996194615 1.0 ['PTPRE|p.K243R|1|0.54|ENSG00000132334|chr10:128066079-128066079|A/G|missense_variant'] 133941 24561 WPFLMLLK True NCI_RA007_Epitope_Rep1 1046.5986952537799 1046.59758993586 101.74 2 -0.7940338195197855 0.24023502996194615 1.0 ['ENST00000221452.12_1_19:45541072-45541210:+|nuORF'] 130576 5307 VVAAEMGKFMK True NCI_RA007_Epitope_Rep3 1209.6249866546098 1209.6233549037902 27.884 3 -0.7940345387281448 0.24023502996194615 1.0 ['ENST00000587478.1_1_17:41150475-41150953:+|nuORF'] 26778 17818 FLDRLVDV True PC9_epitope_Rep2 975.5389314481899 975.53782993586 73.831 2 -0.7940461158216713 0.24023502996194615 1.0 ['ENST00000418411.6_1_12:113540888-113573291:-|nuORF', 'nc|ENSG00000111344|O95294-2|RASAL1', 'nc|ENSG00000111344|O95294|RASAL1', 'ENSG00000111344|ENST00000548055|RASAL1', 'nc|ENSG00000111344|O95294-3|RASAL1', 'RASAL1|p.G550W|1|0.18|ENSG00000111344|chr12:113107106-113107106|C/A|missense_variant', 'RASAL1|p.G550V|1|0.18|ENSG00000111344|chr12:113107105-113107105|C/A|missense_variant', 'ENST00000546727.5_1_12:113538464-113545121:-|nuORF'] 67706 9370 LTGEMFAP True PC9_epitope_Rep6 864.4051403973199 864.40404993586 46.234 2 -0.794060691609383 0.24023502996194615 1.0 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG'] 62700 17727 LLWVLKMP True PC9_epitope_Rep1 998.5986952537799 998.59758993586 72.984 2 -0.7941134566044623 0.24023502996194615 1.0 ['ENST00000511521.1_1_4:78784023-78784152:+|nuORF'] 36355 18270 GVHKRKRTMWP True NCI_RA007_Epitope_Rep2 1394.77174243102 1394.77009490379 75.824 3 -0.7941400511801531 0.24023502996194615 1.0 ['ENST00000523024.1_2_8:10356260-10405046:-|nuORF'] 123931 24378 VKKKKKKRQRY True NCI_RA007_Epitope_Rep5 1488.9728847657198 1488.97123490379 101.24 3 -0.7941937264665376 0.24024610719076223 1.0 ['ENST00000358951.6_1_1:220323782-220323881:-|nuORF'] 129787 5632 VTKSSLIWSY True NCI_RA007_Epitope_Rep4 1182.62847472858 1182.62683490379 28.265 3 -0.7942473827635937 0.24025718409657526 1.0 ['ENSG00000144015|ENST00000272395|TRIM43', 'ENSG00000144010|ENST00000639673|TRIM43B'] 91382 18354 RMVKKMKK True NCI_RA007_Epitope_Rep1 1047.64091150227 1047.63980993586 75.528 2 -0.7943438286154041 0.24027933693924858 1.0 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 71413 12496 MILTVFCLSV True PC9_epitope_Rep2 1124.59737492444 1124.59573490379 53.374 3 -0.7943985459253379 0.24027933693924858 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN2A|p.L279Ffs*7|1|0.42|ENSG00000136531|chr2:165310458-165310459|-/T|frameshift_variant', 'SCN2A|p.V424Wfs*30|1|0.11|ENSG00000136531|chr2:165313994-165313994|G/-|frameshift_variant', 'ENST00000472119.1_1_2:167159564-167162327:-|nuORF', 'COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'SCN2A|p.H645Qfs*36|1|0.12|ENSG00000136531|chr2:165323419-165323419|T/-|frameshift_variant', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'SCN9A|p.L1226Rfs*18|1|0.19|ENSG00000169432|chr2:166238218-166238218|A/-|frameshift_variant', 'SCN9A|p.D678Vfs*3|1|0.16|ENSG00000169432|chr2:166281750-166281750|T/-|frameshift_variant'] 20233 11407 ENVMEDFLK True PC9_epitope_Rep1 1123.52196105471 1123.52032490379 48.756 3 -0.794487494589711 0.2402834067119573 1.0 ['ENST00000411990.6_1_1:207235951-207252361:+|nuORF', 'nc|ENSG00000123836|O60825-2|PFKFB2', 'ENSG00000123836|ENST00000367080|PFKFB2'] 123593 26195 VIKFLIIIA True PC9_epitope_Rep6 1028.6997891940398 1028.69868993586 117.93 2 -0.7944962142545771 0.2402834067119573 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 108672 9169 TELKGKSEV True PC9_epitope_Rep4 989.5393253710099 989.53822993586 42.862 2 -0.7945056646399259 0.2402834067119573 1.0 ['nc|ENSG00000182985|Q9BY67-2|CADM1', 'ENST00000537140.5_1_11:115040311-115375169:-|nuORF', 'nc|ENSG00000182985|Q9BY67-5|CADM1', 'nc|ENSG00000182985|Q9BY67|CADM1', 'nc|ENSG00000182985|Q9BY67-4|CADM1', 'ENSG00000182985|ENST00000331581|CADM1'] 36123 11397 GVEQLPVV True H1975_Epitope_Rep2 839.4752685624699 839.47416993586 48.888 2 -0.7945351956659192 0.2402944821051097 1.0 ['ENSG00000169710|ENST00000306749|FASN'] 58865 18425 LFSGSVAAIA True PC9_epitope_Rep4 934.5123823471799 934.51128993586 78.941 2 -0.7945413393692963 0.2403055571753455 1.0 ['ENST00000373504.10_1_X:72783056-72783248:+|nuORF'] 71599 20122 MLKKQRWVKKN True NCI_RA007_Epitope_Rep3 1457.8653084626897 1457.86366490379 87.689 3 -0.7945650701499891 0.2403066876566964 1.0 ['ENST00000368886.9_1_10:124758104-124758158:-|nuORF'] 38962 5411 HIVFWFHKSNQ True PC9_epitope_Rep5 1441.72550343125 1441.72384490379 25.825 3 -0.794572845534347 0.2403066876566964 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 79971 15382 PITTLGTI True H1975_Epitope_Rep3 814.48001958974 814.4794749679301 64.578 1 -0.7946340043649394 0.2403066876566964 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 45510 14127 ISESIKELQFY True H1975_Epitope_Rep3 1355.6972825643898 1355.69618993586 59.669 2 -0.7946743555877762 0.2403066876566964 1.0 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF', 'ENST00000544507.1_1_11:114319952-114320694:+|nuORF', 'ENST00000539788.5_1_11:114314891-114320694:+|nuORF', 'ENST00000543131.5_1_11:114310234-114320694:+|nuORF', 'ENST00000538403.5_1_11:114314877-114320694:+|nuORF', 'nc|ENSG00000076043|Q9Y3B8-2|REXO2', 'nc|ENSG00000076043|Q9Y3B8-3|REXO2', 'ENSG00000076043|ENST00000265881|REXO2'] 94033 24504 RVRLLPLL True NCI_RA007_Epitope_Rep3 978.6702204012598 978.66912993586 106.03 2 -0.7947037505740854 0.2403066876566964 1.0 ['ENSG00000164326|ENST00000296777|CARTPT', 'nc|ENSG00000011478|Q9NXS2-3|QPCTL', 'ENSG00000011478|ENST00000012049|QPCTL'] 112355 5498 TMWQLYEWQQR True H1975_Epitope_Rep3 1567.7241831019098 1567.7225249037901 26.201 3 -0.7947050932678379 0.2403066876566964 1.0 ['ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5', 'PLEKHA5-AEBP2|4|fusion', 'PLEKHA5-AEBP2|2|fusion', 'PLEKHA5-AEBP2|3|fusion', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'PLEKHA5-AEBP2|10|fusion', 'PLEKHA5-AEBP2|8|fusion', 'PLEKHA5-AEBP2|9|fusion', 'PLEKHA5-AEBP2|7|fusion', 'PLEKHA5-AEBP2|6|fusion', 'PLEKHA5-AEBP2|5|fusion', 'PLEKHA5-AEBP2|12|fusion', 'PLEKHA5-AEBP2|11|fusion', 'PLEKHA5-AEBP2|1|fusion'] 33309 17791 GLCRFQIV True PC9_epitope_Rep5 934.5058574981 934.5047699358599 73.45 2 -0.7947144947547816 0.2403066876566964 1.0 ['ENSG00000102910|ENST00000285737|LONP2', 'nc|ENSG00000102910|Q86WA8-2|LONP2'] 106996 18647 SYLESFYHM-[Oxidation] True PC9_epitope_Rep5 1191.49066130687 1191.4895699358601 76.75 2 -0.7947150818249565 0.2403066876566964 1.0 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'ENST00000515387.1_1_5:96239260-96245469:+|nuORF', 'ENST00000513084.5_1_5:96237218-96245469:+|nuORF'] 97311 15235 SFSNVWHL True PC9_epitope_Rep3 988.4766655448 988.47556993586 63.75 2 -0.7947466515118584 0.24032883421275106 1.0 ['ENSG00000133980|ENST00000256362|VRTN', 'VRTN|p.G327Vfs*27|2|0.11|ENSG00000133980|chr14:74357762-74357763|-/T|frameshift_variant', 'VRTN|p.G328Afs*47|1|0.52|ENSG00000133980|chr14:74357760-74357760|G/-|frameshift_variant'] 140066 28580 YVLVPFHDPGF True PC9_epitope_Rep5 1289.6444591458896 1289.64280490379 118.77 3 -0.794752055559009 0.24032883421275106 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 18348 15615 EIWKEDLS True PC9_epitope_Rep5 1018.4971262058599 1018.49602993586 65.074 2 -0.7947944646036809 0.24036205162587998 1.0 ['ENSG00000113638|ENST00000337702|TTC33', 'ENST00000511730.2_1_5:40716249-40756023:-|nuORF'] 58743 22339 LFLLPPIILD True PC9_epitope_Rep4 1152.7158331809999 1152.71472993586 94.164 2 -0.7948004888032323 0.24036205162587998 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 37136 13635 GVTELRLLY True H1975_Epitope_Rep1 1062.60734536118 1062.6062499358602 57.579 2 -0.7948158684668014 0.24036205162587998 1.0 ['ENST00000455517.5_2_3:12330435-12330558:+|nuORF'] 67324 10381 LTDQHVQLP True PC9_epitope_Rep1 1049.5505587610498 1049.54946993586 44.814 2 -0.7949494637599204 0.24038069142424065 1.0 ['ENSG00000167315|ENST00000285093|ACAA2', 'ENST00000419045.1_1_X:48634893-48635220:-|nuORF'] 45299 17385 ISALRQHRRN True PC9_epitope_Rep4 1249.71158470261 1249.71048993586 74.873 2 -0.7949709061156598 0.24038069142424065 1.0 ['ENSG00000146072|ENST00000296861|TNFRSF21'] 110790 7286 TKQIICRY True H1975_Epitope_Rep3 1023.55353596651 1023.55242993586 33.001 2 -0.7949723675452085 0.24038069142424065 1.0 ['ENSG00000179455|ENST00000314520|MKRN3', 'MKRN3|p.P161Rfs*10|1|0.15|ENSG00000179455|chr15:23566258-23566258|C/-|frameshift_variant'] 126306 20566 VPILSHPTGTL True PC9_epitope_Rep1 1133.64445914589 1133.6433699358602 83.921 2 -0.7949822221189579 0.24039932959265467 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 28525 5532 FSHEEIAM-[Oxidation] True NCI_RA007_Epitope_Rep2 978.4116827101799 978.41058993586 26.135 2 -0.794988691129725 0.24039932959265467 1.0 ['nc|ENSG00000149925|P04075|ALDOA', 'ENSG00000149925|ENST00000642816|ALDOA', 'ALDOA|p.A306V|1|0.2|ENSG00000149925|chr16:30069629-30069629|C/T|missense_variant'] 74375 24922 NISVPGLQ True NCI_RA007_Epitope_Rep5 826.45486747106 826.45376993586 103.36 2 -0.7949955473237504 0.24039932959265467 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'LATS1|p.G535Efs*6|1|0.37|ENSG00000131023|chr6:149683485-149683485|C/-|frameshift_variant', 'nc|ENSG00000131023|O95835-2|LATS1', 'LATS1|p.D881Gfs*40|1|0.26|ENSG00000131023|chr6:149676689-149676690|-/C|frameshift_variant', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF'] 15327 5070 EAKSIPLECP True H1975_Epitope_Rep3 1085.5426964992898 1085.5415899358602 24.619 2 -0.7951914381436709 0.2404832692083479 1.0 ['ENSG00000121057|ENST00000337714|AKAP1', 'nc|ENSG00000121057|Q92667-2|AKAP1'] 123588 27534 VIKFLIIIA True PC9_epitope_Rep4 1028.6997891940398 1028.69868993586 118.73 2 -0.7953222644683833 0.24053455361566936 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 31841 8060 GENVEALRNLS True PC9_epitope_Rep5 1200.6098645423199 1200.6087699358602 35.94 2 -0.795323476574739 0.24053455361566936 1.0 ['ABCA5|p.Y1038Lfs*45|1|0.17|ENSG00000154265|chr17:69267971-69267974|AAGT/-|frameshift_variant', 'nc|ENSG00000154265|Q8WWZ7-2|ABCA5', 'ENSG00000154265|ENST00000392676|ABCA5'] 9524 19205 AYAAIMEEDD True PC9_epitope_Rep1 1126.4488556841 1126.4477499358602 78.667 2 -0.7953866142511234 0.24057476792142118 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENST00000555962.5_1_14:21868424-21899982:-|nuORF'] 7743 10320 ASSWLHWPP True H1975_Epitope_Rep1 1079.5188647099499 1079.51776993586 44.643 2 -0.7954612189221403 0.24059339570400162 1.0 ['ENST00000487137.6_1_14:23516386-23516554:-|nuORF'] 137306 18749 YLHLGRLSYVH True NCI_RA007_Epitope_Rep1 1356.73025445852 1356.72914993586 77.071 2 -0.7954828648834906 0.24059339570400162 1.0 ['nc|ENSG851|Q9QC07|ERVK-18_pol'] 11585 16068 DGVFNISV True PC9_epitope_Rep5 849.4232329896099 849.42212993586 66.794 2 -0.7955172519367381 0.24059339570400162 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 101069 13778 SLTRKVRQFRE True NCI_RA007_Epitope_Rep1 1418.81063003754 1418.8095299358602 57.61 2 -0.7955639697740391 0.240633606808213 1.0 ['nc|ENSG00000169224|Q5JQS6-2|GCSAML', 'ENSG00000169224|ENST00000366488|GCSAML'] 68352 21465 LTSIGNQHTY True PC9_epitope_Rep1 1132.55128703704 1132.55018993586 87.407 2 -0.7955668095354173 0.240644672417813 1.0 ['ENSG00000169306|ENST00000378993|IL1RAPL1'] 12755 7131 DLGVGRQGS True H1975_Epitope_Rep3 887.44609369251 887.44498993586 32.401 2 -0.7956076965056245 0.24065573770491802 1.0 ['ENST00000588658.1_1_19:14266246-14266459:+|nuORF'] 55696 7799 LDDAVNPLHEN True H1975_Epitope_Rep3 1235.57823006087 1235.57712993586 34.982 2 -0.7956751341564116 0.24067436031940315 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 12552 8050 DLDEVARARRE True H1975_Epitope_Rep3 1328.6796754376398 1328.6785699358602 35.938 2 -0.7956814436106786 0.24067436031940315 1.0 ['nc|ENSG00000172428|Q8WXC6-1|COPS9'] 94034 25614 RVRLLPLL True NCI_RA007_Epitope_Rep5 978.6702204012598 978.66912993586 106.07 2 -0.7956901480588656 0.24067436031940315 1.0 ['ENSG00000164326|ENST00000296777|CARTPT', 'nc|ENSG00000011478|Q9NXS2-3|QPCTL', 'ENSG00000011478|ENST00000012049|QPCTL'] 91383 18543 RMVKKMKK True NCI_RA007_Epitope_Rep1 1047.64091150227 1047.63980993586 76.269 2 -0.7957275908865582 0.2406999956286701 1.0 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 121340 4401 VGHRATAL True PC9_epitope_Rep4 823.46643521427 823.46532993586 23.375 2 -0.7957777689915585 0.24073723319006338 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 22292 8392 ETEDKSFFVR True NCI_RA007_Epitope_Rep5 1256.60371653272 1256.60206490379 38.956 3 -0.7958094584447538 0.24073723319006338 1.0 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 9320 7867 AVSLDVLD True PC9_epitope_Rep5 830.43854870058 830.43744993586 35.204 2 -0.795814031348158 0.24073723319006338 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF'] 84044 10085 QEPVLMYYRQ True PC9_epitope_Rep3 1325.64380752289 1325.64270993586 43.746 2 -0.7958232997373041 0.24073723319006338 1.0 ['ENST00000450376.1_1_22:38284470-38284539:+|nuORF'] 14754 8400 DVWFGFLP True H1975_Epitope_Rep3 979.4803539429098 979.47924993586 37.294 2 -0.7958280791267938 0.24073723319006338 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000563874.5_2_16:28488839-28493793:-|nuORF', 'nc|ENSG00000261832|Q13286-6|CLN3', 'nc|ENSG00000261832|Q13286-2|CLN3', 'ENST00000561689.6_2_16:28488839-28493686:-|nuORF'] 42464 8151 IEQRLQQRN True H1975_Epitope_Rep1 1183.6421677301098 1183.64106993586 36.293 2 -0.7958322877103388 0.24073723319006338 1.0 ['ENST00000606299.1_1_5:148886668-148892751:-|nuORF'] 62282 5121 LLQLRCRLRDD True PC9_epitope_Rep2 1399.7718020006698 1399.77016490379 25.074 3 -0.7959569563742999 0.24081466157745987 1.0 ['nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-8|FGFR1', 'nc|ENSG00000077782|P11362-9|FGFR1', 'ENST00000397090.4_1_8:38287194-38314994:-|nuORF', 'nc|ENSG00000077782|P11362-15|FGFR1'] 92611 8015 RRELWFWWRGW True H1975_Epitope_Rep1 1676.8476842525997 1676.84602490379 35.774 3 -0.795995203757857 0.24081466157745987 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 99349 12730 SLDRVESV True PC9_epitope_Rep5 903.4661604307499 903.46506993586 53.973 2 -0.7959978044588588 0.24081466157745987 1.0 ['HYOU1|p.E939Gfs*11|1|0.39|ENSG00000149428|chr11:119046582-119046583|-/C|frameshift_variant', 'HYOU1|p.L930Sfs*31|1|0.14|ENSG00000149428|chr11:119046610-119046610|G/-|frameshift_variant', 'ENSG00000149428|ENST00000617285|HYOU1', 'nc|ENSG00000149428|Q9Y4L1-2|HYOU1', 'ENST00000543287.5_1_11:118919950-118926831:-|nuORF'] 66001 11883 LSLVFNCSHVL True PC9_epitope_Rep5 1230.6430792469 1230.64144490379 50.707 3 -0.7959980394661503 0.24081466157745987 1.0 ['ENST00000374279.3_1_9:114695950-114696010:+|nuORF'] 109121 10242 TFIQKSTLIK True H1975_Epitope_Rep3 1177.70705940245 1177.7059699358601 44.444 2 -0.7960205044409692 0.24081466157745987 1.0 ['nc|ENSG00000251192|Q2M3X9-2|ZNF674', 'ENSG00000251192|ENST00000683375|ZNF674', 'nc|ENSG00000251192|Q2M3X9|ZNF674', 'ENST00000344302.8_1_X:46332625-46332913:+|nuORF'] 56656 7079 LEAAGDKF True PC9_epitope_Rep3 849.42323298961 849.42212993586 32.238 2 -0.7960976664454692 0.24081466157745987 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 134734 20368 WWWIWWQWWKL True PC9_epitope_Rep5 1802.8874238062597 1802.88577490379 83.38 3 -0.7961125101906826 0.24081466157745987 1.0 ['chr12:54282841-54283827|502|22.89|0.0|21.13|+|1|HNRNPA1,HNRNPA1|1'] 112318 20187 TMGRPLGQPTC True PC9_epitope_Rep5 1159.5477989630697 1159.54615490379 82.698 3 -0.7961428059214352 0.24082221315774138 1.0 ['ENST00000314134.3_1_11:45827124-45827283:+|nuORF'] 20813 6612 EQNWRQHREAY True NCI_RA007_Epitope_Rep1 1515.69672248411 1515.69508490379 29.732 3 -0.7961622756509591 0.24082221315774138 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 108898 7353 TESHQREIPLP True H1975_Epitope_Rep2 1305.66771377161 1305.6666099358602 33.223 2 -0.7962676830531316 0.24082625606362987 1.0 ['nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'ENSG00000104447|ENST00000395715|TRPS1'] 34592 8286 GQGPYPYS True PC9_epitope_Rep4 867.37628279719 867.37518993586 39.332 2 -0.7962891425303534 0.24082625606362987 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'nc|ENSG00000204352|Q5T035|FAM120A2P'] 4494 16498 AKKKKKKKKG True NCI_RA007_Epitope_Rep3 1170.8288463009796 1170.82720490379 72.692 3 -0.7963087862105881 0.24082625606362987 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 125897 2794 VNTDSVHTQIQ True NCI_RA007_Epitope_Rep1 1240.6047791618798 1240.60368993586 14.735 2 -0.796330530060133 0.24086644913180283 1.0 115797 5527 TVLYISPP True H1975_Epitope_Rep3 888.49566965388 888.49456993586 26.308 2 -0.796422338844784 0.2408704898690478 1.0 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5', 'NFAT5|p.L1061Ffs*35|2|0.25|ENSG00000102908|chr16:69693055-69693056|-/T|frameshift_variant', 'NFAT5-CDH3|2|fusion', 'NFAT5-CDH3|1|fusion', 'NFAT5-CDH3|3|fusion'] 43166 14582 IGSFFPDF True PC9_epitope_Rep5 928.4330693973199 928.43196993586 61.091 2 -0.7964309516692311 0.2408704898690478 1.0 ['nc|ENSG00000120907|P35348-2|ADRA1A', 'nc|ENSG00000120907|P35348-3|ADRA1A', 'nc|ENSG00000120907|P35348-4|ADRA1A', 'ENSG00000120907|ENST00000380573|ADRA1A'] 140945 22884 YYYYHYCYAWL True PC9_epitope_Rep3 1606.65912323386 1606.6580299358602 93.289 2 -0.7964552352679473 0.2408704898690478 1.0 ['ENST00000360409.7_1_2:206547248-206547725:+|nuORF'] 117282 14350 VAAATTTLL True PC9_epitope_Rep4 859.50148331031 859.50038993586 63.103 2 -0.796501424127287 0.24088558735707524 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2'] 72653 9139 MWNWMVSL True PC9_epitope_Rep5 1065.47759414493 1065.4764899358602 40.099 2 -0.7965256516932765 0.24088558735707524 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 20379 10293 EPKGSYPALI True NCI_RA007_Epitope_Rep3 1073.57571087973 1073.57460993586 47.559 2 -0.7965470120208759 0.24088558735707524 1.0 ['ENST00000392238.2_1_2:203631321-203631381:+|nuORF'] 108048 8273 TDFYIGGVSS True H1975_Epitope_Rep2 1044.4763907612798 1044.47528993586 36.774 2 -0.7965534447006298 0.24088558735707524 1.0 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS', 'SESN1-EYS|1|fusion'] 62405 20570 LLRTIDELV True PC9_epitope_Rep2 1070.63356010902 1070.6324699358602 84.557 2 -0.7965777521583856 0.2408931354413971 1.0 ['ENSG00000135605|ENST00000381501|TEC'] 4732 25566 ALDVLAILTVV True PC9_epitope_Rep3 1125.70091139285 1125.69980993586 103.83 2 -0.7965937693475018 0.2408931354413971 1.0 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 18483 7181 EKLPEHTK True NCI_RA007_Epitope_Rep4 980.5290950404801 980.52798993586 34.244 2 -0.7966448922342817 0.24093332168137727 1.0 ['nc|ENSG00000164509|Q8NI17-6|IL31RA', 'nc|ENSG00000164509|Q8NI17|IL31RA', 'nc|ENSG00000164509|Q8NI17-12|IL31RA', 'ENSG00000164509|ENST00000652347|IL31RA'] 78624 10553 PDTGQKKTL True PC9_epitope_Rep1 986.53965972418 986.53856993586 45.482 2 -0.7967091201621743 0.2409735067507537 1.0 ['nc|ENSG00000164830|Q8N573-2|OXR1'] 89561 4494 RERTLHIEA True NCI_RA007_Epitope_Rep4 1123.60980497267 1123.60816490379 23.672 3 -0.7968089078953285 0.2410573842120594 1.0 ['ENSG00000129657|ENST00000436233|SEC14L1', 'nc|ENSG00000129657|Q92503-2|SEC14L1', 'nc|ENSG00000129657|Q92503-3|SEC14L1', 'SEC14L1|p.Y98Lfs*35|1|0.11|ENSG00000129657|chr17:77191260-77191260|A/-|frameshift_variant'] 36689 12120 GVLYKEDNYV True PC9_epitope_Rep4 1198.58700383942 1198.5859099358602 54.427 2 -0.7968217116120964 0.24106492674259417 1.0 ['ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-3|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-2|ERLEC1'] 131263 24817 VVQEPRRII True NCI_RA007_Epitope_Rep5 1108.67167695324 1108.67117496793 102.95 1 -0.7968395049173231 0.24106492674259417 1.0 ['ENSG00000169071|ENST00000375708|ROR2'] 34757 21591 GQRLPVEDFSL True PC9_epitope_Rep4 1259.6510010783097 1259.64990993586 91.233 2 -0.796878104057233 0.24112018873694788 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 73535 22866 NFIQIVSPF True PC9_epitope_Rep2 1063.57023157647 1063.56912993586 93.443 2 -0.7968986361707023 0.24112018873694788 1.0 ['L1ME1_dup6617|chr3:129847425-129848424:-|1.1624042579176193|0.4453241998369115|1.38|502.0|67|3|anti-sense'] 106753 18131 SYEMLIKEKSV True PC9_epitope_Rep3 1325.69008900897 1325.68843490379 74.941 3 -0.796946875938728 0.24112018873694788 1.0 ['ENSG00000153147|ENST00000283131|SMARCA5'] 11204 7383 DELGYDDDFPV True H1975_Epitope_Rep2 1283.51937777207 1283.51773490379 33.339 3 -0.7969782123194842 0.24112018873694788 1.0 ['ENSG00000123066|ENST00000281928|MED13L'] 63414 9698 LPGKAAGF True H1975_Epitope_Rep1 759.4279244472299 759.42682993586 42.228 2 -0.7969871063134141 0.24112018873694788 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2'] 99375 6961 SLDWRRRRKS True NCI_RA007_Epitope_Rep2 1358.7643485514598 1358.7632499358601 31.698 2 -0.7970188229433673 0.2411312401700938 1.0 ['ENST00000586602.5_1_19:9679707-9694912:-|nuORF', 'ENST00000320451.6_1_19:9679704-9695196:-|nuORF'] 127492 8518 VQTPYALYH True PC9_epitope_Rep5 1090.54474510462 1090.54364993586 37.706 2 -0.7971289512361435 0.24119702927042377 1.0 ['ENGASE|p.F152L|1|0.08|ENSG00000167280|chr17:79079528-79079528|C/G|missense_variant'] 44802 9581 IPVDSAVAV True NCI_RA007_Epitope_Rep3 869.4858332461699 869.48528496793 44.771 1 -0.7971397056981744 0.24119702927042377 1.0 ['ENST00000525183.1_1_11:75848287-75852454:+|nuORF', 'nc|ENSG00000198382|Q9P2Y5-2|UVRAG', 'ENSG00000198382|ENST00000356136|UVRAG'] 15265 8176 EAGRNSSPW True H1975_Epitope_Rep2 1002.4519073489399 1002.45080993586 36.399 2 -0.7971986908022151 0.24123017779913503 1.0 ['ENST00000520655.5_1_8:42128987-42129218:+|nuORF'] 24956 23259 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 97.213 2 -0.7971997571705897 0.24123017779913503 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 126309 11177 VPISAVWVHKR True H1975_Epitope_Rep3 1290.75607528354 1290.7549699358601 48.09 2 -0.7972341280967615 0.24123017779913503 1.0 ['ENST00000589123.5_2_19:3467023-3467371:+|nuORF'] 73246 5455 NEIDAEPP True H1975_Epitope_Rep3 883.39232678415 883.39122993586 26.038 2 -0.7973130552275469 0.24123771386967602 1.0 ['ENSG00000113460|ENST00000336767|BRIX1', 'ENST00000510960.5_1_5:34915843-34922894:+|nuORF', 'ENST00000510834.1_1_5:34915843-34920030:+|nuORF', 'ENST00000515798.5_1_5:34915843-34922393:+|nuORF'] 109449 8957 TGSRGRTMK True NCI_RA007_Epitope_Rep1 992.51854744012 992.51744993586 38.841 2 -0.7973303899412942 0.24123771386967602 1.0 ['ENST00000542965.2_2_16:30662736-30663151:+|nuORF'] 22162 8868 ETAIQFKPP True H1975_Epitope_Rep3 1029.5494961318898 1029.54838993586 39.113 2 -0.7973838965801725 0.24130349316365013 1.0 ['ENSG00000162639|ENST00000651461|HENMT1', 'ENST00000493676.1_1_1:109197361-109203629:-|nuORF'] 127714 7755 VRHKDQKTSVP True NCI_RA007_Epitope_Rep2 1293.7153326703701 1293.7142299358602 34.794 2 -0.7973944680202996 0.24130349316365013 1.0 ['ENSG00000118298|ENST00000369111|CA14'] 89827 16043 RFKKIQKLW True NCI_RA007_Epitope_Rep3 1245.7709970716899 1245.7693649037901 70.792 3 -0.7974162966060897 0.2413291010221614 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2'] 130677 15179 VVDEIDSI True H1975_Epitope_Rep3 888.44402800384 888.44292993586 63.789 2 -0.7974877536688358 0.24135470813494664 1.0 ['ENSG00000133028|ENST00000255390|SCO1'] 12212 14399 DIPEWRKDI True PC9_epitope_Rep5 1170.6033226099 1170.6022299358601 60.386 2 -0.7975242857040039 0.24136223992079323 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 27394 10619 FNDGNAAVV True PC9_epitope_Rep2 905.4242956187699 905.42374496793 46.16 1 -0.7975645230820944 0.24136223992079323 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 62103 8545 LLNNHHLS True NCI_RA007_Epitope_Rep5 946.4984636185402 946.49736993586 39.551 2 -0.7975880772638572 0.24136274295697752 1.0 ['ENST00000330927.4_1_17:29632143-29632203:-|nuORF'] 116073 5927 TVSDSGAGPV True PC9_epitope_Rep2 888.4188758851599 888.41776993586 28.189 2 -0.7976731304311666 0.24136274295697752 1.0 ['ENST00000360104.7_1_7:151836847-151841837:-|nuORF'] 75835 6030 NRDLATPVM-[Oxidation] True PC9_epitope_Rep4 1031.50698007735 1031.50588993586 30.177 2 -0.7977216416184261 0.24136274295697752 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 56366 16266 LDRRRQIT True PC9_epitope_Rep1 1056.6152247062798 1056.61412993586 67.386 2 -0.7977382373004704 0.24136274295697752 1.0 ['ENST00000419735.7_1_7:105516268-105516867:-|nuORF'] 42423 13939 IEQEGEKEKQY True H1975_Epitope_Rep3 1379.65687430439 1379.65576993586 58.931 2 -0.7977667194538667 0.2413667598416026 1.0 ['ENST00000288235.8_1_15:59466065-59466374:-|nuORF'] 31073 8469 GAWGQKGLKGF True PC9_epitope_Rep1 1147.6138277239497 1147.61218490379 37.411 3 -0.7977799364642456 0.2413667598416026 1.0 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 52870 21050 KREVVIDWILL True PC9_epitope_Rep3 1382.8285715174597 1382.82691490379 86.248 3 -0.7977864805621466 0.2413667598416026 1.0 ['ENST00000524591.6_1_8:12879494-12879584:+|nuORF'] 132263 5602 VYLAEKGEND True NCI_RA007_Epitope_Rep3 1136.5349682665599 1136.53333490379 29.03 3 -0.7977993821085869 0.24137780430636638 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 121594 16494 VGLAVFLIYKF True NCI_RA007_Epitope_Rep2 1268.7532813188798 1268.75218993586 68.885 2 -0.7979249367499976 0.24143252292910175 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 64788 23777 LRTRFLLRRRR True PC9_epitope_Rep5 1541.9855151380898 1541.9844099358602 96.44 2 -0.7980204766790437 0.24149828218715425 1.0 ['ENST00000571543.1_1_17:1131443-1132291:-|nuORF'] 119236 12928 VEKSHISV True PC9_epitope_Rep3 897.4919812557699 897.49088993586 54.752 2 -0.7980393715734975 0.24149828218715425 1.0 ['ENST00000294740.3_1_1:200377749-200377815:-|nuORF'] 48943 6087 KEYESYSDF True NCI_RA007_Epitope_Rep1 1166.4767846840998 1166.4756899358601 27.714 2 -0.7981177058827614 0.2415203656796809 1.0 ['ENSG00000021852|ENST00000371237|C8B'] 108044 21195 TDFFLLAVM True PC9_epitope_Rep6 1055.53615456687 1055.5350499358601 94.374 2 -0.7981352916679293 0.2415203656796809 1.0 ['ENSG00000181499|ENST00000321252|OR6T1'] 88559 24870 RAIKGFGGIG True PC9_epitope_Rep1 974.5661492555398 974.56504993586 100.57 2 -0.7981690413770801 0.24153140694373681 1.0 ['ENST00000424266.6_1_6:41040043-41040205:-|nuORF', 'ENST00000479950.5_1_6:41039388-41040205:-|nuORF', 'ENST00000486443.5_1_6:41038950-41040205:-|nuORF', 'ENST00000463088.5_1_6:41039005-41040205:-|nuORF'] 53168 10523 KSRTRWIHSQI True H1975_Epitope_Rep1 1410.7844152896998 1410.7833099358602 45.431 2 -0.7982052740068949 0.24156902699949057 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|56|2|sense'] 89817 23816 RFHVLKMLLNL True PC9_epitope_Rep2 1382.8220466683797 1382.8204049037902 97.079 3 -0.7982656123889906 0.24156902699949057 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 126116 11818 VPEGAYLEFFI True NCI_RA007_Epitope_Rep4 1283.64379043955 1283.64214490379 52.438 3 -0.7982922500878408 0.24156902699949057 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 58483 19446 LEYLRQIFR True PC9_epitope_Rep2 1236.69789170108 1236.69625490379 80.178 3 -0.7982957548335545 0.24156902699949057 1.0 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-9|SMPD4', 'nc|ENSG00000136699|Q9NXE4-10|SMPD4', 'nc|ENSG00000136699|Q9NXE4-7|SMPD4', 'nc|ENSG00000136699|Q9NXE4-8|SMPD4', 'ENST00000438378.2_1_2:132275414-132277996:+|nuORF', 'ENST00000482171.5_1_2:130910130-130912221:-|nuORF', 'nc|ENSG00000136699|Q9NXE4-5|SMPD4'] 24575 20468 FALSGPLFL True H1975_Epitope_Rep1 963.5429541994699 963.5424049679301 85.128 1 -0.7982972094645395 0.24156902699949057 1.0 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 80219 11622 PLANSNTSGY True H1975_Epitope_Rep2 1022.4668887067401 1022.46578993586 49.771 2 -0.7983085469523787 0.24156902699949057 1.0 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'nc|ENSG00000153827|Q14669-4|TRIP12'] 10387 8637 CKVCGRGYTSK True H1975_Epitope_Rep1 1200.5743480640797 1200.57324993586 38.151 2 -0.7983310032663701 0.24156902699949057 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 112891 22116 TPPPSLKELL True PC9_epitope_Rep4 1093.63831113629 1093.63720993586 93.285 2 -0.7983356421603903 0.24156902699949057 1.0 ['ENSG00000124104|ENST00000491381|SNX21'] 109313 13818 TGGGGGGD True NCI_RA007_Epitope_Rep2 576.21396849936 576.2134249679301 58.399 1 -0.7983364051806807 0.24156902699949057 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 111211 7229 TLFRYVRHYSY True NCI_RA007_Epitope_Rep1 1503.76228286279 1503.76063490379 32.109 3 -0.7984001731985615 0.24156902699949057 1.0 ['ENST00000505732.5_1_9:15186859-15307321:-|nuORF'] 93226 25306 RRRRRRRHC True PC9_epitope_Rep3 1350.78643849206 1350.78534993586 102.75 2 -0.7984401683838822 0.24157654969653747 1.0 ['ENST00000487413.1_1_3:50453473-50541058:-|nuORF'] 84007 4371 QENHYTDRDYR True PC9_epitope_Rep6 1495.64401820491 1495.64236490379 23.907 3 -0.7984756888608171 0.24157654969653747 1.0 ['ENSG00000126653|ENST00000247026|NSRP1'] 116373 15059 TVYPTDPP True PC9_epitope_Rep6 888.4228986364399 888.42180993586 69.973 2 -0.7984911303862497 0.24158758805379285 1.0 ['ENSG00000154124|ENST00000284274|OTULIN'] 44936 5132 IQENHIKSI True NCI_RA007_Epitope_Rep1 1080.5927579262 1080.5916699358602 24.044 2 -0.7985170157660555 0.2415915937768334 1.0 ['RYR1|p.R4174Pfs*35|1|0.31|ENSG00000196218|chr19:38561349-38561352|CCGC/-|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.M2582Afs*19|1|0.11|ENSG00000196218|chr19:38502635-38502636|TA/-|frameshift_variant'] 114656 7481 TSQPSTSVP True H1975_Epitope_Rep2 902.4345259493 902.43342993586 33.723 2 -0.7985200235053316 0.2415915937768334 1.0 ['nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2', 'nc|ENSG00000053524|Q86YR7-2|MCF2L2', 'ENST00000488149.5_1_3:182948954-183027611:-|nuORF', 'nc|ENSG00000053524|Q86YR7-3|MCF2L2'] 42592 15315 IESSPQYRL True PC9_epitope_Rep5 1091.56112344475 1091.56002993586 63.921 2 -0.7985453418177592 0.2415915937768334 1.0 ['nc|ENSG00000168488|Q8WWM7-3|ATXN2L', 'ENSG00000168488|ENST00000336783|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-2|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-9|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-4|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-5|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-8|ATXN2L', 'nc|ENSG00000168488|Q8WWM7-6|ATXN2L', 'ENST00000563314.5_1_16:28834580-28846939:+|nuORF', 'nc|ENSG00000168488|Q8WWM7-7|ATXN2L', 'ENST00000570284.1_1_16:28840745-28842349:+|nuORF', 'ENST00000564284.1_1_16:28841101-28842119:+|nuORF'] 74326 14429 NILSLINVN True PC9_epitope_Rep6 998.5760452329 998.57494993586 67.395 2 -0.7985626810298742 0.24160263127255793 1.0 ['nc|ENSG00000164253|Q9HAD4-2|WDR41', 'ENSG00000164253|ENST00000296679|WDR41', 'ENST00000502528.5_1_5:76728962-76747206:-|nuORF'] 548 7803 AAQQPHIAGV True PC9_epitope_Rep1 990.5246783663799 990.52358993586 34.838 2 -0.7986618848944487 0.24161366844701876 1.0 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 66524 12594 LSSETELQL True PC9_epitope_Rep3 1018.5182555732599 1018.51714993586 53.466 2 -0.7986908165648936 0.2416392583752947 1.0 ['ENST00000482587.5_3_1:179834498-179834546:-|nuORF'] 122467 11010 VGSPAEEI True PC9_epitope_Rep6 800.39159850816 800.39050993586 53.244 2 -0.7987368027977372 0.24167940042203304 1.0 ['nc|ENSG00000168781|Q6PFW1-7|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-4|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-3|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-2|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1|PPIP5K1', 'ENSG00000168781|ENST00000420765|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-5|PPIP5K1'] 86123 3272 QPQSFSVGQPQ True H1975_Epitope_Rep3 1201.5727507576098 1201.57111490379 17.276 3 -0.7987858074242675 0.24170498864893183 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 63468 24233 LPHFPATPWFL True H1975_Epitope_Rep3 1324.6968290719199 1324.69572993586 100.95 2 -0.7987937426098309 0.2417089887803955 1.0 ['ENST00000569796.1_1_16:2278422-2280215:+|nuORF'] 39045 24544 HKRYKIQKKVR True NCI_RA007_Epitope_Rep5 1482.9259345732999 1482.92482993586 101.88 2 -0.7988084326362 0.2417089887803955 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 96795 7487 SERREFERNFY True PC9_epitope_Rep4 1531.7167892223497 1531.7151449037901 36.159 3 -0.7988459158338903 0.2417089887803955 1.0 ['ENST00000257290.9_1_4:55095294-55095372:+|nuORF'] 92353 19338 RQPKKFQKGRK True NCI_RA007_Epitope_Rep3 1399.8524352798697 1399.8507749037901 84.42 3 -0.7989175903155138 0.24171650587156765 1.0 ['ENSG00000163814|ENST00000296129|CDCP1', 'nc|ENSG00000163814|Q9H5V8-2|CDCP1'] 78333 10876 PASWIWWRMLR True H1975_Epitope_Rep1 1500.7812444855597 1500.7801499358602 46.794 2 -0.7989393938021231 0.24171650587156765 1.0 ['PTCHD4|p.F810Sfs*25|1|0.13|ENSG00000244694|chr6:47878415-47878415|A/-|frameshift_variant', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05|PTCHD4', 'PTCHD4|p.K464Sfs*32|1|0.28|ENSG00000244694|chr6:47879455-47879455|C/-|frameshift_variant'] 72268 7197 MSDMNESRPPV True H1975_Epitope_Rep2 1261.54310750545 1261.54147490379 32.617 3 -0.7989980995891593 0.2417540847652442 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 79174 8595 PGEDELTER True H1975_Epitope_Rep1 1044.4723680099999 1044.4717749679298 37.989 1 -0.7990471365624051 0.2417540847652442 1.0 ['ENSG00000162341|ENST00000294309|TPCN2'] 46880 23450 IVHRRIINRF True H1975_Epitope_Rep3 1322.8047568114596 1322.8036499358602 97.871 2 -0.7990535811499272 0.2417540847652442 1.0 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'ENSG00000134775|ENST00000590592|FHOD3'] 98309 3773 SIFYFFKSFQY True NCI_RA007_Epitope_Rep2 1475.71253870571 1475.71090490379 19.317 3 -0.7990551830822612 0.2417540847652442 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17', 'SLC6A17|p.L509Cfs*48|1|0.4|ENSG00000197106|chr1:110195614-110195614|G/-|frameshift_variant'] 10856 11677 DALMDGVV True PC9_epitope_Rep4 818.3844049527399 818.38330993586 52.678 2 -0.7990874262285972 0.2417540847652442 1.0 ['LRCH2|p.A670D|2|0.3|ENSG00000130224|chrX:115122851-115122851|G/T|missense_variant'] 68238 19622 LTQVRYRHP True PC9_epitope_Rep3 1168.6465248345598 1168.6454299358602 80.713 2 -0.7991008874874984 0.2417540847652442 1.0 ['ENST00000464576.1_1_2:131128085-131128235:+|nuORF', 'ENST00000490812.5_1_2:131127701-131128235:+|nuORF'] 129850 24732 VTLIVSVLTV True PC9_epitope_Rep4 1042.6637976081402 1042.6627099358602 103.63 2 -0.799127579876775 0.2417540847652442 1.0 ['ENSG00000174599|ENST00000310754|TRAM1L1'] 128541 13560 VSHEHLEGAL True PC9_epitope_Rep3 1090.5407223533398 1090.5396299358601 57.213 2 -0.799128941103319 0.2417540847652442 1.0 ['ENSG00000119912|ENST00000265986|IDE', 'IDE|p.I437Vfs*24|2|0.19|ENSG00000119912|chr10:92506459-92506459|T/AC|frameshift_variant', 'ENST00000478361.6_1_10:94240585-94297282:-|nuORF'] 131935 18561 VYFGHDSEL True PC9_epitope_Rep1 1065.47672511445 1065.47562993586 76.182 2 -0.7991385213743879 0.2417540847652442 1.0 ['nc|ENSG00000185792|Q7RTR0-2|NLRP9', 'ENSG00000185792|ENST00000332836|NLRP9'] 73908 6149 NHIENQDECV True PC9_epitope_Rep6 1199.4877008043102 1199.4860549037899 32.081 3 -0.7991675901582928 0.2417540847652442 1.0 ['ENSG00000116221|ENST00000360840|MRPL37', 'ENST00000490670.1_1_1:54670749-54673061:+|nuORF'] 130281 7754 VTTDFLFEK True NCI_RA007_Epitope_Rep5 1098.55972646242 1098.5586299358602 36.524 2 -0.7992412694524181 0.2418052463881978 1.0 ['ENSG00000164100|ENST00000296499|NDST3'] 133703 8604 WLEILNKIENK True NCI_RA007_Epitope_Rep4 1398.7871006282996 1398.78544490379 39.878 3 -0.7992483034287189 0.2418052463881978 1.0 ['nc|ENSG00000214944|Q8N1W1-4|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-3|ARHGEF28', 'ENSG00000214944|ENST00000513042|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-6|ARHGEF28', 'nc|ENSG00000214944|Q8N1W1-5|ARHGEF28', 'ENST00000510312.6_1_5:73178320-73193923:+|nuORF'] 12491 9661 DKYRDQYNWFF True NCI_RA007_Epitope_Rep1 1580.7048275563195 1580.70319490379 41.576 3 -0.7993050279422317 0.24184185640503383 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 83467 5661 QDFAYLSSWGP True NCI_RA007_Epitope_Rep5 1269.56660274801 1269.56550993586 28.463 2 -0.7993195677122165 0.24184185640503383 1.0 ['ENSG00000149654|ENST00000537909|CDH22'] 66464 22731 LSRRHMKV True PC9_epitope_Rep1 1025.59165281073 1025.59054993586 92.239 2 -0.7993582636718912 0.24185288640595903 1.0 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 139715 24401 YTVRTLLR True NCI_RA007_Epitope_Rep2 1020.6080140675199 1020.6074749679301 102.48 1 -0.7994509279226135 0.2418639160859508 1.0 ['ENST00000307533.10_1_4:6676966-6677095:+|nuORF'] 57437 8949 LEINGVVYTG True PC9_epitope_Rep2 1063.55497543515 1063.5538699358601 39.779 2 -0.7995197988759603 0.24188949343885477 1.0 ['ENSG00000205143|ENST00000378909|ARID3C'] 55263 8564 LAQLQEKVQ True H1975_Epitope_Rep1 1055.59750895347 1055.59640993586 37.867 2 -0.799643167369039 0.24189700320046553 1.0 ['DPY19L2|p.R93Q|1|0.24|ENSG00000177990|chr12:63668116-63668116|C/T|missense_variant'] 111506 18895 TLLNTIPGWLI True PC9_epitope_Rep5 1239.72270946659 1239.72106490379 77.699 3 -0.7996446428452846 0.24189700320046553 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2'] 121165 15068 VGGIQNLI True PC9_epitope_Rep2 812.4756029156399 812.4745099358599 63.215 2 -0.799673880993441 0.24190803159686358 1.0 ['nc|ENSG00000165887|Q9GZV1-2|ANKRD2', 'ENSG00000165887|ENST00000370655|ANKRD2', 'nc|ENSG00000165887|Q9GZV1|ANKRD2'] 56971 7827 LEEAEHKVQSL True NCI_RA007_Epitope_Rep1 1281.65648038157 1281.65538993586 34.436 2 -0.7997155295251688 0.2419195298635557 1.0 ['nc|ENSG00000257923|Q13948-2|CUX1', 'nc|ENSG00000257923|P39880-9|CUX1', 'ENST00000558836.5_1_7:101575863-101926379:+|nuORF', 'nc|ENSG00000257923|Q13948-9|CUX1', 'nc|ENSG00000257923|Q13948-10|CUX1', 'nc|ENSG00000257923|Q13948|CUX1', 'ENST00000560541.5_1_7:101556607-101926379:+|nuORF', 'nc|ENSG00000257923|P39880-4|CUX1', 'ENSG00000257923|ENST00000292535|CUX1', 'nc|ENSG00000257923|P39880-2|CUX1', 'nc|ENSG00000257923|P39880-5|CUX1', 'nc|ENSG00000257923|P39880-3|CUX1', 'nc|ENSG00000257923|P39880-6|CUX1', 'ENST00000465461.6_1_7:101747665-101768865:+|nuORF', 'ENST00000497815.5_1_7:101459310-101755188:+|nuORF', 'ENST00000485792.1_1_7:101754981-101758554:+|nuORF'] 138110 18891 YQHFRRLL True PC9_epitope_Rep4 1131.63014649443 1131.6290499358602 80.75 2 -0.7997499807251068 0.2419195298635557 1.0 ['nc|ENSG00000235718|Q9BY79-2|MFRP', 'ENSG00000235718|ENST00000619721|MFRP'] 122886 12838 VGVPVGSALP True H1975_Epitope_Rep3 894.5174677276199 894.51691496793 54.602 1 -0.7997518092538757 0.2419195298635557 1.0 ['ENSG00000163872|ENST00000305135|YEATS2', 'YEATS2-ATP11B|1|fusion'] 99225 15837 SLCHSRTRV True PC9_epitope_Rep4 1057.54509654113 1057.54398993586 68.84 2 -0.7997657154029814 0.2419195298635557 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 88473 6586 QYYRFHEHWRF True NCI_RA007_Epitope_Rep2 1667.7745788819896 1667.7734899358602 30.229 2 -0.7997670767049739 0.2419195298635557 1.0 ['nc|ENSG00000211460|Q15631-2|TSN', 'ENST00000490104.5_1_2:122514991-122522940:+|nuORF', 'ENST00000467324.5_1_2:122513466-122522940:+|nuORF', 'ENSG00000211460|ENST00000389682|TSN'] 99819 10581 SLGTADVHFER True PC9_epitope_Rep5 1230.59929985862 1230.59764490379 45.688 3 -0.7997943493819628 0.24192703787746553 1.0 ['ENST00000512673.1_1_17:79846815-79848630:-|nuORF', 'nc|ENSG00000183684|Q86V81|ALYREF', 'ENSG00000183684|ENST00000505490|ALYREF'] 113005 14403 TPTFRPSSSI True PC9_epitope_Rep6 1091.56112344475 1091.56002993586 67.299 2 -0.7998304487652638 0.24192703787746553 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2'] 14714 15006 DVQRILSQI True PC9_epitope_Rep6 1070.6084079903399 1070.60730993586 69.744 2 -0.799895372653326 0.24193454545454546 1.0 ['ENSG00000089847|ENST00000318934|ANKRD24', 'nc|ENSG00000089847|Q8TF21-2|ANKRD24'] 3166 5872 AGEEPPAQPP True H1975_Epitope_Rep2 991.4610750503098 991.45996993586 27.572 2 -0.7999148852998719 0.24193454545454546 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 123721 15427 VIQLHLQK True PC9_epitope_Rep3 977.6022004110899 977.60110993586 64.495 2 -0.8000142971044152 0.2419856876890854 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G', 'PIK3C2G|p.K900Rfs*29|1|0.36|ENSG00000139144|chr12:18491461-18491462|AG/-|frameshift_variant', 'PIK3C2G|p.G1094Efs*4|1|0.24|ENSG00000139144|chr12:18505418-18505418|G/-|frameshift_variant'] 22653 8228 ETRYRQRYLDL True H1975_Epitope_Rep1 1511.7844748593498 1511.78281490379 36.592 3 -0.8000143531809413 0.2419856876890854 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF'] 82072 12438 PSWGASCPELR True PC9_epitope_Rep2 1201.55499251849 1201.55335490379 53.149 3 -0.8000741757631418 0.24203330666860592 1.0 ['ENSG00000203786|ENST00000606109|KPRP'] 138668 22966 YRSRRRYSWRR True PC9_epitope_Rep6 1640.8872576487997 1640.8861699358602 101.44 2 -0.8000911101543324 0.24203330666860592 1.0 ['ENST00000491215.1_1_6:32163881-32163974:-|nuORF'] 37006 5221 GVRSVNGL True PC9_epitope_Rep2 800.4504507969599 800.44934993586 25.472 2 -0.8001202493885295 0.24203330666860592 1.0 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2', 'COPB2|p.L588Ifs*11|1|0.21|ENSG00000184432|chr3:139366675-139366691|CCAGGACTGAAACCAGC/-|frameshift_variant'] 69028 17527 LVHRTYRKDQP True PC9_epitope_Rep1 1411.7684308723897 1411.76732993586 72.212 2 -0.8001648956343552 0.2420844423113283 1.0 ['ENSG00000204920|ENST00000270014|ZNF155', 'nc|ENSG00000204920|Q12901-2|ZNF155'] 69321 11754 LVPPFFSRDHS True H1975_Epitope_Rep3 1300.65642081192 1300.6553299358602 50.355 2 -0.8001992148628335 0.2420844423113283 1.0 ['ENST00000466122.5_1_21:42602051-42602099:+|nuORF'] 139727 7611 YTWRWVWSWEW True PC9_epitope_Rep1 1683.7622828627896 1683.76063490379 34.096 3 -0.8003004298959873 0.24211000901713256 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 134087 22166 WQRLRSIIFC True PC9_epitope_Rep6 1320.7124962193998 1320.71138993586 98.203 2 -0.8003153027700153 0.2421175101803374 1.0 ['nc|ENSG00000163291|Q6TCH7-3|PAQR3', 'ENST00000512760.5_1_4:79841695-79860421:-|nuORF', 'nc|ENSG00000163291|Q6TCH7-2|PAQR3', 'ENSG00000163291|ENST00000512733|PAQR3'] 139558 7228 YTMMGSEDH True H1975_Epitope_Rep2 1069.38448160573 1069.3833899358601 32.736 2 -0.8003686218476254 0.2421175101803374 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 23283 10352 EVRTAPWNT True H1975_Epitope_Rep2 1072.53015766964 1072.5290699358602 44.827 2 -0.8003980026808629 0.24214307528977183 1.0 ['nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 68270 9228 LTRHRQVHRLQ True NCI_RA007_Epitope_Rep1 1442.83309681762 1442.83198993586 39.894 2 -0.8004276551494085 0.24215057516396898 1.0 ['ENSG00000261221|ENST00000568956|ZNF865'] 67670 10801 LTFPMWNP True PC9_epitope_Rep1 1004.47897404392 1004.47786993586 46.433 2 -0.8004311297340979 0.24215057516396898 1.0 ['ENST00000403290.5_1_11:13331558-13347974:+|nuORF'] 124577 13887 VLGRQEAEDP True H1975_Epitope_Rep2 1112.5462016565998 1112.5451099358602 58.561 2 -0.8005109865386566 0.24216159618404978 1.0 ['ENST00000237536.8_2_20:35406325-35406529:-|nuORF'] 102070 4602 SPPRRARHGS True H1975_Epitope_Rep3 1119.6009716244698 1119.5998699358602 22.824 2 -0.8005617801689264 0.2421836372626007 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 130958 17622 VVITTLTTL True NCI_RA007_Epitope_Rep1 959.59029831471 959.58920993586 72.682 2 -0.8005618402978033 0.2421836372626007 1.0 ['ENSG00000168830|ENST00000305344|HTR1E'] 92961 21675 RRPTPLGG True PC9_epitope_Rep1 852.4929843152798 852.49188993586 88.203 2 -0.8005733982735278 0.2421946573210988 1.0 ['KIAA1755|p.H733Tfs*30|1|0.28|ENSG00000149633|chr20:38223609-38223609|G/-|frameshift_variant'] 43147 5382 IGQVHEEFK True NCI_RA007_Epitope_Rep4 1085.5505587610498 1085.54946993586 27.269 2 -0.8006413778549275 0.24220567705909726 1.0 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1', 'ENST00000600393.1_1_19:17881687-17885288:+|nuORF', 'FCHO1|p.A375Qfs*23|1|0.33|ENSG00000130475|chr19:17776101-17776101|G/-|frameshift_variant'] 38101 8499 HENQLAIWNLK True NCI_RA007_Epitope_Rep2 1364.7200836976397 1364.71898993586 37.702 2 -0.8006491829907142 0.2422166964766101 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 80500 6361 PLLILPHNCK True NCI_RA007_Epitope_Rep4 1146.65833538822 1146.65668490379 31.072 3 -0.800728557208191 0.2422352120048857 1.0 ['ENST00000308488.10_1_11:77374192-77374351:-|nuORF'] 120569 5052 VGAEEGLCAE True H1975_Epitope_Rep1 976.4171616329999 976.41606993586 24.504 2 -0.8007623495940196 0.2422352120048857 1.0 ['ENST00000470889.5_1_3:138327468-138327522:+|nuORF'] 62954 5950 LNEARREH True H1975_Epitope_Rep1 1023.52098996827 1023.5198899358601 27.957 2 -0.8007686308957318 0.2422352120048857 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'KIF13A-CCHCR1|1|fusion', 'ENST00000486060.1_1_6:31112443-31112875:-|nuORF'] 105136 18382 STLRPKIF True PC9_epitope_Rep1 960.5756513100799 960.57454993586 75.496 2 -0.8008164526451141 0.24227928347097824 1.0 ['ENST00000547693.5_1_12:49217494-49217587:+|nuORF', 'ENST00000550190.1_1_12:49217494-49222448:+|nuORF', 'ENST00000548279.5_1_12:49217494-49218071:+|nuORF', 'ENST00000550391.5_1_12:49217494-49218071:+|nuORF'] 30578 17057 GAKKKKKKKK True PC9_epitope_Rep2 1170.8288463009796 1170.82720490379 70.861 3 -0.8008194320177476 0.24227928347097824 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 36865 8960 GVQAQHCWSPQ True NCI_RA007_Epitope_Rep3 1239.54549046395 1239.5443899358602 42.338 2 -0.8008370396903858 0.24227928347097824 1.0 ['ENST00000599599.5_2_19:57106694-57112946:+|nuORF'] 29194 6102 FVAPADVRRL True NCI_RA007_Epitope_Rep3 1142.6560268890998 1142.65438490379 30.992 3 -0.8008536474225807 0.24227928347097824 1.0 ['ENSG00000185453|ENST00000614654|ZSWIM9', 'nc|ENSG00000185453|Q86XI8|ZSWIM9'] 122353 14720 VGSASLEY True PC9_epitope_Rep6 824.3915985081601 824.39050993586 68.567 2 -0.8008721373822499 0.24229030053651657 1.0 ['ENST00000568996.1_1_1:25664643-25664691:-|nuORF'] 19868 4129 ELVQYWDQCFY True NCI_RA007_Epitope_Rep1 1492.6333024088399 1492.6316549037901 20.141 3 -0.8008891097498226 0.2422907488986784 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 56475 15091 LDTENLFEAQQ True H1975_Epitope_Rep1 1306.60411045554 1306.6030099358602 63.301 2 -0.8008923153483565 0.2422907488986784 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-6|SYNE1', 'nc|ENSG00000131018|Q8NF91-5|SYNE1', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 24613 23686 FAPLWWPRR True NCI_RA007_Epitope_Rep3 1227.66653200315 1227.66487490379 102.7 3 -0.8008934929933322 0.2422907488986784 1.0 ['ENST00000233535.8_1_2:27481772-27486087:-|nuORF'] 122541 16124 VGSWQQAL True PC9_epitope_Rep5 887.4501164437899 887.44900993586 67.011 2 -0.800896233662212 0.2422907488986784 1.0 ['ENST00000550554.5_1_14:105955152-105957428:+|nuORF'] 23242 7309 EVRESHLTAV True H1975_Epitope_Rep2 1139.59348620219 1139.5923899358602 33.053 2 -0.8009064960301986 0.24229471970225633 1.0 ['DNASE1|p.D64E|1|0.15|ENSG00000213918|chr16:3655893-3655893|C/A|missense_variant'] 80916 13587 PMHLYCQKVP True PC9_epitope_Rep1 1214.5940208795 1214.5929299358602 57.118 2 -0.8009074621853001 0.24229471970225633 1.0 ['nc|ENSG00000147130|Q14202-2|ZMYM3', 'ENSG00000147130|ENST00000314425|ZMYM3'] 4225 7085 AIERMKQKEWW True NCI_RA007_Epitope_Rep2 1503.7656539910697 1503.76399490379 32.184 3 -0.8009228097367794 0.24229471970225633 1.0 ['CCDC38|p.R493W|1|0.54|ENSG00000165972|chr12:95872262-95872262|G/A|missense_variant'] 22052 6789 ESRQRQSRMEK True H1975_Epitope_Rep1 1433.7157436765299 1433.71464993586 31.157 2 -0.8009925068870559 0.2423057352620484 1.0 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1', 'ENST00000493660.5_1_17:38792069-38802054:-|nuORF'] 133680 18902 WKWFKHIIRFI True NCI_RA007_Epitope_Rep5 1572.9081592508398 1572.9070699358601 79.55 2 -0.8010080355521707 0.24231675050155554 1.0 ['ENST00000409175.5_1_2:160599702-160602296:+|nuORF'] 51962 9052 KKWRDYYRRRH True NCI_RA007_Epitope_Rep2 1662.89675970334 1662.89566993586 39.812 2 -0.8010619447731843 0.24236785485840553 1.0 ['MYO9A|p.Q1106K|2|0.81|ENSG00000066933|chr15:71899841-71899841|G/T|missense_variant'] 135651 3333 YEFIYKHQQK True NCI_RA007_Epitope_Rep1 1382.6982856239 1382.69665490379 16.859 3 -0.8011011173338835 0.24236785485840553 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'nc|ENSG00000173821|Q63HN8-5|RNF213', 'ENST00000573548.1_1_17:78263625-78265730:+|nuORF'] 8999 16740 AVIAKENYPL True PC9_epitope_Rep1 1116.6179100448799 1116.6168099358601 69.219 2 -0.8011348152136154 0.2423753452536706 1.0 ['ENSG00000167515|ENST00000696289|TRAPPC2L', 'nc|ENSG00000167515|Q9UL33|TRAPPC2L', 'ENST00000564547.1_1_16:88923507-88925305:+|nuORF'] 85440 24684 QLFKRNSRDR True PC9_epitope_Rep4 1318.7218150331398 1318.7207099358602 103.44 2 -0.8011380808519717 0.2423753452536706 1.0 ['NEK1|p.P243S|1|0.25|ENSG00000137601|chr4:169585429-169585429|G/A|missense_variant'] 66053 15617 LSNFYQNHRRY True NCI_RA007_Epitope_Rep1 1496.7272943363998 1496.72618993586 64.836 2 -0.8011639372561749 0.24238635868064137 1.0 ['nc|ENSG00000112697|Q9NV96-3|TMEM30A', 'nc|ENSG00000112697|Q9NV96-2|TMEM30A', 'ENSG00000112697|ENST00000230461|TMEM30A'] 116609 14610 TYGPDLFPL True PC9_epitope_Rep5 1021.5120479940099 1021.51094993586 61.199 2 -0.801192111548392 0.2424119083614374 1.0 ['ENST00000495458.5_1_5:176729817-176730289:-|nuORF', 'ENST00000471466.5_1_5:176729278-176730289:-|nuORF'] 138517 9336 YRKMKERL True PC9_epitope_Rep6 1122.6331832695398 1122.6315449037902 46.093 3 -0.8012433908185929 0.24243040918671416 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 105260 7414 STSSWPEYFK True NCI_RA007_Epitope_Rep4 1230.5557037111396 1230.55460993586 35.16 2 -0.8012683550187265 0.24243040918671416 1.0 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 91436 17340 RNLRPDDVF True NCI_RA007_Epitope_Rep1 1130.58325587166 1130.5821499358601 71.582 2 -0.8013002441238982 0.24243040918671416 1.0 ['ENSG00000128268|ENST00000341184|MGAT3'] 68280 13279 LTRKSWEL True PC9_epitope_Rep2 1031.5763795860698 1031.5752899358602 56.354 2 -0.8013213023880695 0.24244142101284957 1.0 ['ENST00000366595.7_1_1:236140589-236140733:-|nuORF'] 58383 10053 LEVNDHAP True PC9_epitope_Rep3 893.4242956187699 893.42318993586 43.625 2 -0.8013444630943231 0.24244538438058694 1.0 ['ENSG00000129910|ENST00000289746|CDH15'] 74840 18422 NLQDWTEI True PC9_epitope_Rep4 1017.4767251144499 1017.47562993586 78.928 2 -0.8013467936945802 0.24244538438058694 1.0 ['ENSG00000154114|ENST00000683345|TBCEL', 'ENST00000533134.1_1_11:120924418-120928239:+|nuORF'] 64876 20230 LSAQTREPRQW True PC9_epitope_Rep2 1370.7054962626598 1370.70385490379 83.232 3 -0.8014410680456027 0.24244538438058694 1.0 ['ENSG00000181234|ENST00000435159|TMEM132C'] 39253 21649 HLLRGWKAF True PC9_epitope_Rep1 1126.63998290214 1126.63888993586 88.101 2 -0.8014609429112223 0.24248546511627908 1.0 ['ENST00000485260.1_1_3:100287677-100289600:+|nuORF'] 14713 15925 DVQRILSQI True PC9_epitope_Rep4 1070.6084079903399 1070.60730993586 69.183 2 -0.8015503978007101 0.24248942633315407 1.0 ['ENSG00000089847|ENST00000318934|ANKRD24', 'nc|ENSG00000089847|Q8TF21-2|ANKRD24'] 42035 11168 IEDYDVIAS True PC9_epitope_Rep3 1023.4760564081099 1023.4749499358601 47.959 2 -0.801558087439782 0.24248942633315407 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 93163 24179 RRRRRHRH True NCI_RA007_Epitope_Rep2 1228.7350545422 1228.7339499358602 101.55 2 -0.8015596743615824 0.24248942633315407 1.0 ['nc|ENSG00000182872|P98175-2|RBM10', 'ENSG00000182872|ENST00000377604|RBM10', 'nc|ENSG00000182872|P98175-5|RBM10'] 14515 12942 DTYQKRLRFYW True H1975_Epitope_Rep1 1574.7993966474999 1574.79828993586 54.856 2 -0.8016317398710873 0.24250043602116156 1.0 ['ENSG00000117215|ENST00000375105|PLA2G2D'] 90124 5893 RGRRWRRRRDR True PC9_epitope_Rep1 1624.9471725667597 1624.9460699358601 27.484 2 -0.8016492839382274 0.2425259792166267 1.0 ['ENST00000425427.6_1_5:153570544-153674427:+|nuORF'] 115335 5016 TVEDAAQR True NCI_RA007_Epitope_Rep2 888.4301092751998 888.42900993586 24.134 2 -0.8016747447596038 0.24253698805336743 1.0 ['nc|ENSG00000083123|P21953-2|BCKDHB', 'ENSG00000083123|ENST00000320393|BCKDHB'] 57281 6635 LEGFKVMCKI True NCI_RA007_Epitope_Rep2 1166.61917299818 1166.6175149037902 30.42 3 -0.8016971481229478 0.24254799657011641 1.0 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 45646 19406 ISHYLTQE True PC9_epitope_Rep5 989.48181049489 989.48070993586 79.691 2 -0.8017596394438526 0.24255547966109084 1.0 ['ENSG00000167216|ENST00000683218|KATNAL2', 'KATNAL2|p.M73Wfs*9|1|0.3|ENSG00000167216|chr18:47052973-47052973|G/-|frameshift_variant'] 23567 8357 EYCWDTFVYR True NCI_RA007_Epitope_Rep1 1380.58087291316 1380.5797699358602 36.508 2 -0.8017701168017043 0.24255547966109084 1.0 ['ENSG00000179750|ENST00000333467|APOBEC3B', 'nc|ENSG00000179750|Q9UH17-3|APOBEC3B'] 137803 22601 YPELQVLLF True PC9_epitope_Rep4 1120.6168474157198 1120.61627496793 95.165 1 -0.8018456967841877 0.24259202743747366 1.0 ['OR5D18|p.P27L|1|0.35|ENSG00000186119|chr11:55819709-55819709|C/T|missense_variant'] 31421 6582 GEDIVITAHV True NCI_RA007_Epitope_Rep1 1052.55022440788 1052.54912993586 29.615 2 -0.8018632283552003 0.24259202743747366 1.0 ['nc|ENSG00000112304|Q9NPJ3-2|ACOT13', 'ENSG00000112304|ENST00000230048|ACOT13'] 135106 3183 YANGGKAA True NCI_RA007_Epitope_Rep4 750.36605246666 750.36494993586 17.785 2 -0.8019442632180942 0.24262857308938718 1.0 ['nc|ENSG00000180846|Q8NCQ2|CSNK1G2-AS1'] 123496 13296 VIGPSQSWVDL True PC9_epitope_Rep5 1199.61863832087 1199.61700490379 56.154 3 -0.8019473418450289 0.24262857308938718 1.0 ['ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7'] 123705 19756 VIPNEQSVVI True PC9_epitope_Rep6 1096.61282466444 1096.61172993586 88.651 2 -0.801958497269338 0.24263957915540443 1.0 ['MTREX|p.E621Q|2|0.57|ENSG00000039123|chr5:55378364-55378364|G/C|missense_variant'] 10381 3678 CKMQPLSYK True NCI_RA007_Epitope_Rep2 1096.5409226774798 1096.53982993586 18.956 2 -0.8020258156958815 0.24266511661701665 1.0 ['L1MDa_dup2979|chr7:144182489-144183245:+|1.2047758210331163|0.1455468842828891|3.05|495.0|23|3|sense'] 12880 17773 DLLLTREVSWR True H1975_Epitope_Rep1 1386.76194850962 1386.76084993586 73.984 2 -0.8020432254041653 0.2426725954342677 1.0 ['UQCC1|p.G271R|1|0.53|ENSG00000101019|chr20:35304024-35304024|C/G|missense_variant'] 107574 10987 TAELRLNNNEI True NCI_RA007_Epitope_Rep2 1285.6626283911698 1285.66152993586 47.345 2 -0.8020603341086051 0.2426725954342677 1.0 ['nc|ENSG00000187122|O75093-2|SLIT1', 'ENSG00000187122|ENST00000266058|SLIT1'] 877 14932 ADLPHLQDSF True PC9_epitope_Rep5 1141.5403880001702 1141.53928993586 62.441 2 -0.8021078498844482 0.24268360022087246 1.0 ['ENSG00000149262|ENST00000534064|INTS4'] 84364 15302 QGAGSVLF True PC9_epitope_Rep4 777.40210362221 777.4015549679301 66.792 1 -0.8021694970692692 0.24268755176472298 1.0 ['nc|ENSG00000204084|P32019-4|INPP5B', 'nc|ENSG00000204084|P32019|INPP5B'] 63296 23152 LPAVLLHTAF True NCI_RA007_Epitope_Rep5 1080.6331661862002 1080.63206993586 96.31 2 -0.8021873483967075 0.24268755176472298 1.0 ['ENST00000428443.7_1_2:179967411-179967483:-|nuORF'] 11041 25831 DDLPRMRFK True PC9_epitope_Rep2 1176.60736244452 1176.60571490379 105.1 3 -0.8022102165815419 0.24268755176472298 1.0 ['nc|ENSG00000160062|Q96BR9-2|ZBTB8A', 'ENSG00000160062|ENST00000373510|ZBTB8A'] 62209 12694 LLPRASVGV True PC9_epitope_Rep6 910.5600012459399 910.55890993586 60.305 2 -0.8022774102432296 0.2427240893306017 1.0 ['ENST00000309295.8_1_11:65343742-65346557:+|nuORF'] 21905 10620 ESFTVELSMP True H1975_Epitope_Rep1 1138.5216267015398 1138.5205299358602 45.806 2 -0.8022893092460361 0.2427240893306017 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.G3456Afs*3|1|0.25|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant', 'FRAS1|p.G3729Afs*31|1|0.1|ENSG00000138759|chr4:78537086-78537086|G/-|frameshift_variant'] 58330 19414 LETSLRRL True NCI_RA007_Epitope_Rep4 986.58727862294 986.58618993586 83.943 2 -0.8023044734262047 0.24272451218271898 1.0 ['ENSG00000137507|ENST00000260061|LRRC32'] 57633 11066 LELSGNDFK True H1975_Epitope_Rep1 1021.50802524273 1021.50692993586 47.529 2 -0.802365760011221 0.24272451218271898 1.0 ['nc|ENSG00000100565|Q0VAA2|LRRC74A', 'ENSG00000100565|ENST00000689127|LRRC74A', 'nc|ENSG00000100565|Q0VAA2-2|LRRC74A'] 69144 20925 LVLNVKIKP True PC9_epitope_Rep2 1022.68520175906 1022.68410993586 85.934 2 -0.8023982784765303 0.24272451218271898 1.0 ['ENST00000380916.8_1_9:14611214-14611316:-|nuORF'] 101068 6811 SLTQSHLR True NCI_RA007_Epitope_Rep3 940.50902830224 940.50792993586 33.895 2 -0.8024080487520626 0.24272451218271898 1.0 ['ENST00000564998.1_3_16:84164915-84178722:-|nuORF'] 110565 13023 TISAYQEDP True PC9_epitope_Rep1 1022.4556553167 1022.45454993586 54.963 2 -0.8024214636043565 0.242731987970187 1.0 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 85067 19006 QIMEDLRTL True PC9_epitope_Rep1 1117.58014463717 1117.5790499358602 77.895 2 -0.8024597882074724 0.242731987970187 1.0 ['ENSG00000111707|ENST00000543473|SUDS3'] 138655 15557 YRRSMCTWP True PC9_epitope_Rep2 1198.53756863254 1198.5364699358602 65.112 2 -0.8025321758180712 0.24275399166073428 1.0 ['ENST00000561494.5_1_16:22308825-22316709:+|nuORF'] 111704 9526 TLPRGYCITWL True NCI_RA007_Epitope_Rep2 1321.68527841205 1321.68418993586 41.668 2 -0.8025482558874237 0.24275399166073428 1.0 ['ENST00000299240.10_1_11:43413485-43418328:+|nuORF', 'ENST00000526774.5_1_11:43418220-43418328:+|nuORF'] 139996 10 YVKLLSKTPEL True NCI_RA007_Epitope_Rep1 1289.75948889813 1289.75785490379 0.04265 3 -0.8025680574829062 0.24276499302649931 1.0 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'ENST00000503126.1_1_5:179133324-179137021:+|nuORF', 'nc|ENSG00000127022|P27824-3|CANX'] 52983 13790 KRQLLLQPKL True PC9_epitope_Rep3 1235.8077765032297 1235.80612490379 58.12 3 -0.8026022023122372 0.2427834677126462 1.0 ['ENST00000489944.1_1_1:151106967-151107344:-|nuORF'] 105886 22110 SVLDDKLV True PC9_epitope_Rep1 887.49639792987 887.49530993586 89.859 2 -0.8026074363715169 0.2427834677126462 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 139696 19856 YTTRKPVSL True PC9_epitope_Rep5 1063.60259433391 1063.6014899358602 81.426 2 -0.8026258615285218 0.2427834677126462 1.0 ['ENSG00000095203|ENST00000374566|EPB41L4B'] 99133 10737 SLAIDKLKP True PC9_epitope_Rep2 983.60153170475 983.60042993586 46.619 2 -0.802698054388719 0.24280899529316055 1.0 ['ENST00000409301.5_1_7:32584308-32588465:+|nuORF'] 100826 14444 SLRWERVF True PC9_epitope_Rep4 1091.5876129761098 1091.58650993586 63.468 2 -0.8027312634320818 0.2428199950607958 1.0 ['ENSG00000055483|ENST00000449938|USP36', 'USP36|p.K1086Nfs*25|1|0.3|ENSG00000055483|chr17:78798534-78798534|T/-|frameshift_variant', 'USP36|p.Q806Rfs*91|1|0.52|ENSG00000055483|chr17:78803778-78803778|T/-|frameshift_variant'] 30852 9013 GAQRTPGPEL True PC9_epitope_Rep5 1024.5301576696397 1024.5290699358602 39.614 2 -0.8027498856449575 0.24283099450884685 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3', 'ESYT3-RPN1|1|fusion'] 120046 10452 VFETLTNL True PC9_epitope_Rep5 935.49639792987 935.49530993586 45.19 2 -0.8028120230935734 0.24284946470853125 1.0 ['TLR8|p.H576Kfs*4|1|0.29|ENSG00000101916|chrX:12920764-12920765|-/TAAAT|frameshift_variant', 'ENSG00000101916|ENST00000218032|TLR8', 'nc|ENSG00000101916|Q9NR97-2|TLR8'] 127731 12985 VRIVPSPDW True NCI_RA007_Epitope_Rep2 1067.57637958607 1067.5758749679298 55.132 1 -0.8028309175847724 0.24284946470853125 1.0 ['ENSG00000159674|ENST00000290902|SPON2'] 122730 11571 VGVAVLKSS True H1975_Epitope_Rep1 858.51746772762 858.51636993586 49.494 2 -0.8028317559051397 0.24284946470853125 1.0 ['KEAP1|p.N469Kfs*11|1|0.54|ENSG00000079999|chr19:10489772-10489773|-/T|frameshift_variant'] 74803 22826 NLNQQYQKVKA True PC9_epitope_Rep4 1332.7149983172 1332.71335490379 96.024 3 -0.8028655898031488 0.24287498910548794 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant'] 31128 3091 GCIVFHGIYVP True NCI_RA007_Epitope_Rep3 1203.61105084263 1203.6094049037902 17.268 3 -0.8029079179388875 0.2428969844866655 1.0 ['chr6:45020632-45062708|281|10.85|0.01|10.56|-|2|TE_info:L1PA2,L1PA2_dup1868,L1,LINE,donor,+,45062708,45068476|SUPT3H,None|10'] 104296 4663 SSEIDVQEPN True NCI_RA007_Epitope_Rep4 1116.4934973774 1116.49240993586 24.359 2 -0.8029450446240133 0.2428969844866655 1.0 ['nc|ENSG00000047634|Q9UN30-2|SCML1'] 61911 25650 LLLLKMLMI True PC9_epitope_Rep1 1086.69088138646 1086.68978993586 103.69 2 -0.8029622323623312 0.242904453417773 1.0 ['Tigger1_dup9834|chr14:19106484-19106883:-|1.044883763241324|0.2064126540684672|2.34|491.0|14|1|anti-sense', 'Tigger1_dup11946|chr22:15828868-15829349:-|1.0861641370613664|0.126984307270513|3.1|495.0|22|2|anti-sense'] 66179 16354 LSPIFPGG True NCI_RA007_Epitope_Rep1 786.42759009406 786.4270449679301 67.725 1 -0.8029670250748931 0.242904453417773 1.0 ['nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN'] 114493 5524 TSFKESYETQM True H1975_Epitope_Rep3 1349.5809324828099 1349.57982993586 26.295 2 -0.8029972364670982 0.24292997516231643 1.0 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 119924 15992 VEYCEVCCE True H1975_Epitope_Rep2 1075.3660546602698 1075.36547496793 66.712 1 -0.8030202776593648 0.24293391430646333 1.0 ['ENST00000490777.2_10:133754257-133757569:+|nuORF'] 125380 13503 VLSTPWESL True PC9_epitope_Rep5 1030.5335117145798 1030.5324099358602 56.959 2 -0.8030256356464055 0.24293391430646333 1.0 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 18166 10277 EIPGRWITR True H1975_Epitope_Rep1 1126.6247267608198 1126.6236299358602 44.474 2 -0.8030438870703533 0.24293391430646333 1.0 ['nc|ENSG00000064300|P08138-2|NGFR', 'ENSG00000064300|ENST00000172229|NGFR'] 4736 21093 ALDYLKDFF True PC9_epitope_Rep3 1130.5648118428599 1130.56370993586 86.417 2 -0.8030786611092523 0.24294572967948996 1.0 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI'] 74630 7360 NLEHRPQYLEQ True NCI_RA007_Epitope_Rep2 1425.7000765290502 1425.69896993586 33.253 2 -0.8030827795226316 0.24294572967948996 1.0 ['ENST00000587257.1_1_19:36426667-36427862:+|nuORF'] 101294 10309 SLYALAMTK True NCI_RA007_Epitope_Rep3 996.5314035396 996.53030993586 47.619 2 -0.803109820447985 0.24294572967948996 1.0 ['DNAH7|p.P818L|1|0.21|ENSG00000118997|chr2:195960698-195960698|G/A|missense_variant'] 54986 19742 LAIHLEEVE True PC9_epitope_Rep5 1051.5549754351498 1051.5538699358601 80.982 2 -0.803162468649396 0.24294572967948996 1.0 ['IL4R|p.R521I|1|0.26|ENSG00000077238|chr16:27362914-27362914|G/T|missense_variant'] 2649 18964 AESWYQTKYEE True PC9_epitope_Rep3 1432.61467513924 1432.6135699358601 78.169 2 -0.8031922313013395 0.24294572967948996 1.0 ['ENSG00000205420|ENST00000330722|KRT6A', 'CON__P02538', 'CON__P04259', 'ENSG00000170465|ENST00000252250|KRT6C', 'CON__P48668', 'ENST00000553087.1_1_12:52864282-52865086:-|nuORF', 'CON__P50446', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'ENST00000547890.5_1_12:52910884-52911722:-|nuORF', 'CON__Q922U2'] 68956 8161 LVGDRKPLHLD True NCI_RA007_Epitope_Rep1 1261.7142700412098 1261.7131699358602 35.743 2 -0.8031935170615347 0.24294572967948996 1.0 ['ENST00000413704.5_1_3:9487316-9517772:+|nuORF', 'ENST00000466242.5_1_3:9484907-9517772:+|nuORF', 'ENST00000486465.5_1_3:9512364-9516346:+|nuORF', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5'] 5541 12086 ANGELKKVEDL True PC9_epitope_Rep1 1214.65066672514 1214.6495699358602 51.349 2 -0.8032046694683732 0.24294572967948996 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 74633 12415 NLEKQISLIGQ True NCI_RA007_Epitope_Rep1 1241.6979512707298 1241.6968499358602 52.266 2 -0.8032146802836917 0.24294572967948996 1.0 ['GPR158|p.A1124Lfs*2|1|0.11|ENSG00000151025|chr10:25598987-25598987|C/-|frameshift_variant', 'ENSG00000151025|ENST00000376351|GPR158', 'GPR158|p.L807*|1|0.21|ENSG00000151025|chr10:25598043-25598043|C/-|frameshift_variant'] 128575 17911 VSKDPSSYV True PC9_epitope_Rep3 980.48147614172 980.48036993586 74.097 2 -0.8032596947190425 0.24294572967948996 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF'] 43066 6928 IGHDACSYFTS True PC9_epitope_Rep2 1199.4917235555902 1199.4900749037902 32.049 3 -0.8033123103886315 0.24295319556788314 1.0 ['PIK3C2G|p.D929G|1|0.47|ENSG00000139144|chr12:18491551-18491551|A/G|missense_variant'] 50488 1688 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 8.7786 3 -0.8033152904258359 0.24295319556788314 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 110956 15873 TLCRPCPP True PC9_epitope_Rep1 885.4200792688099 885.4189899358599 65.864 2 -0.8033292753925115 0.24296418924806135 1.0 ['RELT-PAAF1|1|fusion', 'RELT|p.L345Sfs*24|1|0.16|ENSG00000054967|chr11:73394718-73394719|-/TC|frameshift_variant', 'ENSG00000054967|ENST00000064780|RELT'] 78709 8179 PEEPGEPAPVP True H1975_Epitope_Rep3 1117.5291546101298 1117.52804993586 36.44 2 -0.8034694132618632 0.24304779054063866 1.0 ['ENSG00000176595|ENST00000320248|KBTBD11'] 119005 17411 VEFRALTMFR True PC9_epitope_Rep2 1268.6699627010798 1268.6688699358601 72.23 2 -0.8034943318196615 0.24305878252788105 1.0 ['PLIN3|p.S324F|2|0.64|ENSG00000105355|chr19:4839526-4839526|G/A|missense_variant'] 93312 9109 RRRYYRLLQSP True PC9_epitope_Rep2 1506.8531635558597 1506.85150490379 40.378 3 -0.8035345615076678 0.24308429536048792 1.0 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 29822 11030 FVVGAVVS True H1975_Epitope_Rep1 776.4432401582 776.44214993586 47.389 2 -0.8035913368671408 0.24309175657426635 1.0 ['ENSG00000167680|ENST00000586582|SEMA6B', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B'] 38940 10819 HIQAEVQL True PC9_epitope_Rep4 936.5028802926399 936.50178993586 49.374 2 -0.8036686214280739 0.24309175657426635 1.0 ['ENSG00000196169|ENST00000389916|KIF19', 'nc|ENSG00000196169|Q2TAC6-3|KIF19', 'ENST00000359939.10_1_17:72322488-72347101:+|nuORF', 'nc|ENSG00000196169|Q2TAC6-2|KIF19', 'ENST00000547389.1_1_17:72322488-72347101:+|nuORF'] 21907 9983 ESFVSEIVGY True H1975_Epitope_Rep1 1128.5339056373998 1128.53280993586 43.334 2 -0.8036836139862455 0.2430992173546879 1.0 ['ENSG00000179148|ENST00000448843|ALOXE3', 'nc|ENSG00000179148|Q9BYJ1-2|ALOXE3'] 64184 15719 LQHLYQDIV True PC9_epitope_Rep4 1127.59750895347 1127.59585490379 68.388 3 -0.8036944506546054 0.2430992173546879 1.0 ['ENST00000351546.7_2_13:78320663-78320714:+|nuORF'] 59963 13524 LHMLPHLHF True PC9_epitope_Rep1 1143.6011548652702 1143.59950490379 56.876 3 -0.8037434864411028 0.2431211976013126 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF'] 39549 14351 HPGFRQRCR True PC9_epitope_Rep4 1155.5832133853498 1155.58156490379 63.107 3 -0.8037549164665589 0.2431211976013126 1.0 ['CD276|p.D84Pfs*82|1|0.1|ENSG00000103855|chr15:73702420-73702442|GCCAGGACCAGGGCAGCGCCTAT/-|frameshift_variant'] 16108 7381 EEEDDDYNK True NCI_RA007_Epitope_Rep4 1155.4203920067898 1155.4192899358602 35.033 2 -0.8038452340811344 0.24312512704358685 1.0 ['ENSG00000163623|ENST00000295886|NKX6-1'] 16573 16054 EEQLTKSF True PC9_epitope_Rep4 980.4814761417199 980.48036993586 69.687 2 -0.8038754632585122 0.24312512704358685 1.0 ['PPP1R35|p.R135T|1|0.07|ENSG00000160813|chr7:100435895-100435895|C/G|missense_variant'] 42389 12414 IENLEESIDPV True NCI_RA007_Epitope_Rep1 1256.6136125100802 1256.61250993586 52.263 2 -0.8039341841160921 0.24312512704358685 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9'] 63978 20096 LQALIQCGQP True PC9_epitope_Rep1 1069.55901526977 1069.5579099358602 82.127 2 -0.803970476589197 0.243147104942215 1.0 ['CON__ENSEMBL:ENSBTAP00000032840'] 12473 6446 DKSVVLYWKWL True PC9_epitope_Rep2 1435.7863723523096 1435.78471490379 30.208 3 -0.8040098770863796 0.243147104942215 1.0 ['ENST00000245046.6_1_3:10004387-10004693:-|nuORF'] 107613 9347 TAGRMCTEGP True H1975_Epitope_Rep1 1021.4321005044899 1021.43100993586 40.861 2 -0.8040423885815187 0.24315809341289546 1.0 ['ENST00000556980.5_1_14:104177876-104180491:-|nuORF'] 134242 19214 WRRRPRTRR True NCI_RA007_Epitope_Rep3 1338.7969860924197 1338.79588993586 83.879 2 -0.804055248920616 0.24318359998838526 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 20133 12032 ENLLKSLQAPE True NCI_RA007_Epitope_Rep1 1240.66631678928 1240.66520993586 50.789 2 -0.8040689333245765 0.24320910582325528 1.0 ['ENST00000500358.6_1_4:100054800-100075776:+|nuORF'] 66716 6101 LSTLRGRAR True NCI_RA007_Epitope_Rep5 1028.6203100867199 1028.61920993586 30.149 2 -0.8041252401640212 0.24326011527126493 1.0 ['ENSG00000162571|ENST00000379289|TTLL10', 'nc|ENSG00000162571|Q6ZVT0-2|TTLL10', 'nc|ENSG00000162571|Q6ZVT0-3|TTLL10'] 23129 6590 EVMLRCWQEKP True H1975_Epitope_Rep1 1417.6846267890496 1417.6835299358602 30.409 2 -0.8041410231175878 0.24326011527126493 1.0 ['ENSG00000135605|ENST00000381501|TEC'] 138181 4577 YQQHLWKSWDP True NCI_RA007_Epitope_Rep2 1486.6993482530597 1486.69771490379 22.43 3 -0.8042149647921837 0.2433546738672822 1.0 ['ENST00000503280.5_1_4:9800851-9909967:-|nuORF'] 88916 7419 REDDLDQLEFK True NCI_RA007_Epitope_Rep3 1406.6677733412596 1406.66666993586 36.308 2 -0.8042291425514613 0.2433546738672822 1.0 ['ENST00000334504.11_2_X:107464528-107554015:-|nuORF'] 65678 15540 LSHDNMEEKVP True PC9_epitope_Rep1 1297.59725125329 1297.59614993586 64.599 2 -0.8043572876165795 0.24342372684513094 1.0 ['ENSG00000204569|ENST00000376511|PPP1R10', 'ENST00000496955.1_1_6:30571493-30571981:-|nuORF'] 38209 5294 HETPLGYDH True H1975_Epitope_Rep3 1067.46722305991 1067.4661299358602 25.442 2 -0.8043888276333452 0.2434276423708392 1.0 ['ENSG00000027075|ENST00000332981|PRKCH'] 122566 15203 VGTENGLM True PC9_epitope_Rep3 819.3796539254699 819.37854993586 63.623 2 -0.8044365899990662 0.2434276423708392 1.0 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK', 'ENST00000484051.5_1_3:170784284-170800202:-|nuORF', 'ENST00000574871.1_1_17:4798302-4798913:+|nuORF', 'nc|ENSG00000141503|Q8N4C8-3|MINK1', 'nc|ENSG00000141503|Q8N4C8-5|MINK1', 'nc|ENSG00000141503|Q8N4C8-2|MINK1', 'nc|ENSG00000141503|Q8N4C8-4|MINK1', 'ENSG00000141503|ENST00000355280|MINK1'] 125878 8828 VNSELVNIY True H1975_Epitope_Rep3 1049.53932537101 1049.53822993586 38.963 2 -0.8044563616070085 0.2434276423708392 1.0 ['ENSG00000149577|ENST00000324225|SIDT2', 'nc|ENSG00000149577|Q8NBJ9-2|SIDT2', 'ENST00000524842.5_3_11:117050096-117052585:+|nuORF'] 121810 7629 VGNDWEVL True PC9_epitope_Rep1 930.4446967101799 930.44358993586 34.166 2 -0.8044683827354748 0.2434350912337238 1.0 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.F1306Ifs*2|1|0.33|ENSG00000188906|chr12:40305920-40305932|AACTTTGATTTTA/-|frameshift_variant', 'LRRK2|p.L498Ffs*32|1|0.15|ENSG00000188906|chr12:40259552-40259553|-/T|frameshift_variant', 'ENST00000474202.1_1_12:40619397-40626186:+|nuORF'] 36122 13074 GVEQLHEDP True PC9_epitope_Rep4 1022.46688870674 1022.46578993586 58.181 2 -0.8044872039383798 0.2434350912337238 1.0 ['ENST00000560170.1_1_15:96828545-96870526:-|nuORF', 'ENST00000502125.6_1_15:96826128-96870526:-|nuORF', 'ENST00000561344.5_1_15:96826128-96833920:-|nuORF'] 117880 15008 VAPQGTAMAV True PC9_epitope_Rep5 943.4797023199098 943.47860993586 62.731 2 -0.8045361932996453 0.2434460734504282 1.0 ['ENSG00000176919|ENST00000371634|C8G'] 14835 18472 DYEQRERFLLF True PC9_epitope_Rep3 1514.7517777487399 1514.75014490379 76.258 3 -0.8046065786402502 0.24345705534830384 1.0 ['nc|ENSG00000075413|P27448-8|MARK3', 'nc|ENSG00000075413|P27448-6|MARK3', 'nc|ENSG00000075413|P27448-3|MARK3', 'nc|ENSG00000075413|P27448-4|MARK3', 'nc|ENSG00000075413|P27448-2|MARK3', 'ENSG00000075413|ENST00000429436|MARK3', 'nc|ENSG00000075413|P27448-7|MARK3', 'ENST00000555235.1_1_14:103966361-103969561:+|nuORF', 'RAD51B-MARK3|2|fusion', 'RAD51B-MARK3|4|fusion', 'RAD51B-MARK3|1|fusion', 'RAD51B-MARK3|3|fusion'] 70756 6428 MEDALPPSL True PC9_epitope_Rep1 971.46338354943 971.46228993586 29.531 2 -0.8046145566329517 0.24346803692736457 1.0 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX'] 69983 19108 LYEWRNYGP True PC9_epitope_Rep2 1196.5614577979197 1196.56036993586 78.87 2 -0.804630962215427 0.24347548407698782 1.0 ['ENSG00000130818|ENST00000253115|ZNF426'] 85955 10225 QPEKYTSRFYL True H1975_Epitope_Rep3 1430.7194149912998 1430.7183099358601 44.378 2 -0.8046384906633507 0.24347548407698782 1.0 ['KCTD8|p.T350Lfs*38|1|0.2|ENSG00000183783|chr4:44175165-44175165|C/-|frameshift_variant', 'ENSG00000183783|ENST00000360029|KCTD8'] 23698 6670 EYHWHDGVK True H1975_Epitope_Rep3 1169.5254066423702 1169.5243099358602 30.61 2 -0.8046867307019735 0.24347977532982104 1.0 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10', 'ENST00000485659.1_1_10:13240798-13246428:+|nuORF'] 70757 6402 MEDALPPSL True PC9_epitope_Rep3 971.46338354943 971.46228993586 29.65 2 -0.8046966674287892 0.24347977532982104 1.0 ['ENSG00000114439|ENST00000325805|BBX', 'nc|ENSG00000114439|Q8WY36-2|BBX'] 101119 18314 SLVFHLTQFMP True PC9_epitope_Rep1 1318.6743793751798 1318.67328993586 75.234 2 -0.8047303254331261 0.24347977532982104 1.0 ['ENST00000228825.11_1_12:110874003-110874424:-|nuORF'] 91377 24373 RMSKRMCVL True NCI_RA007_Epitope_Rep5 1122.58241064998 1122.58075490379 101.22 3 -0.8047326172544227 0.24347977532982104 1.0 ['ENSG00000198128|ENST00000359959|OR2L3'] 31265 12564 GDRLVEVNGVN True H1975_Epitope_Rep2 1170.5992998586198 1170.59820993586 53.421 2 -0.8047727697780206 0.24347977532982104 1.0 ['nc|ENSG00000065054|Q15599-2|NHERF2', 'ENSG00000065054|ENST00000424542|NHERF2'] 55149 17276 LANELRRP True PC9_epitope_Rep6 967.5563128478299 967.55520993586 79.054 2 -0.804786571242054 0.24347977532982104 1.0 ['CON__Q28194', 'nc|ENSG00000137801|P07996-2|THBS1', 'ENSG00000137801|ENST00000260356|THBS1'] 42607 7116 IETDKEYYTV True H1975_Epitope_Rep1 1259.59214878951 1259.5910499358602 32.397 2 -0.8048113141512993 0.24347977532982104 1.0 ['ENSG00000162434|ENST00000342505|JAK1'] 110552 11015 TIRSFEGI True PC9_epitope_Rep1 921.4919812557699 921.49088993586 47.257 2 -0.804834397422258 0.24350526835215233 1.0 ['KIRREL-CD1A|1|fusion', 'ENSG00000158477|ENST00000289429|CD1A'] 22111 4594 ESVTKEAPP True H1975_Epitope_Rep3 956.4814761417199 956.48036993586 22.792 2 -0.8048618541831732 0.2435162474783391 1.0 ['ENST00000267938.8_1_15:76135782-76135929:+|nuORF'] 72996 4351 NDAPQFLEK True NCI_RA007_Epitope_Rep5 1060.5189242795998 1060.5178299358602 23.348 2 -0.8048952406037926 0.24352722628584697 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'RGS22|p.K902Nfs*4|1|0.26|ENSG00000132554|chr8:100002282-100002286|TAGAT/-|frameshift_variant', 'RGS22|p.P235Qfs*30|1|0.33|ENSG00000132554|chr8:100066187-100066187|G/-|frameshift_variant', 'nc|ENSG00000132554|Q8NE09-2|RGS22', 'RGS22|p.L146Ifs*37|1|0.28|ENSG00000132554|chr8:100071527-100071528|-/T|frameshift_variant'] 57864 6446 LEQEKKELQ True NCI_RA007_Epitope_Rep4 1143.6135529404298 1143.61189490379 31.394 3 -0.8049185161468161 0.24353467042057295 1.0 ['nc|ENSG00000138834|Q9UPT6|MAPK8IP3', 'ENSG00000138834|ENST00000610761|MAPK8IP3', 'nc|ENSG00000138834|Q9UPT6-2|MAPK8IP3'] 39517 8755 HPERLKEYILY True PC9_epitope_Rep1 1459.7823496010299 1459.78069490379 38.515 3 -0.8049212256307514 0.24353467042057295 1.0 ['ENST00000295598.9_1_1:116947247-116947373:+|nuORF'] 80494 6351 PLLGTCM[Oxidation]SCK True H1975_Epitope_Rep3 1067.4813595764701 1067.4807749679298 29.42 1 -0.8049665519948035 0.2435456484827376 1.0 ['ENSG00000240505|ENST00000261652|TNFRSF13B', 'nc|ENSG00000240505|O14836-3|TNFRSF13B', 'ENST00000581616.2_1_17:16844708-16875389:-|nuORF'] 31166 11483 GDENINVLDL True NCI_RA007_Epitope_Rep1 1100.5349682665599 1100.53437496793 48.632 1 -0.804973396488432 0.24355662622627272 1.0 ['ENSG00000174145|ENST00000309447|NWD2'] 18482 6696 EKLPEHTK True NCI_RA007_Epitope_Rep3 980.5290950404801 980.52798993586 33.42 2 -0.805006301478181 0.24356406907560585 1.0 ['nc|ENSG00000164509|Q8NI17-6|IL31RA', 'nc|ENSG00000164509|Q8NI17|IL31RA', 'nc|ENSG00000164509|Q8NI17-12|IL31RA', 'ENSG00000164509|ENST00000652347|IL31RA'] 75277 10851 NPQPPNLSAV True PC9_epitope_Rep2 1035.53490869691 1035.53380993586 47.055 2 -0.8050199296786122 0.24356406907560585 1.0 ['RYR1|p.D2861N|1|0.21|ENSG00000196218|chr19:38506342-38506342|G/A|missense_variant'] 139625 11841 YTRQERYRARP True PC9_epitope_Rep5 1494.7803925384198 1494.77875490379 50.546 3 -0.8050583648423364 0.24358602275365684 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 92908 14825 RRPGPGGK True NCI_RA007_Epitope_Rep3 823.4776686043099 823.47656993586 65.741 2 -0.805080240485384 0.24358602275365684 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A'] 114079 11135 TRRAAAAI True NCI_RA007_Epitope_Rep2 828.4929843152798 828.49188993586 47.893 2 -0.8052150236637453 0.24365504331548474 1.0 ['chr1:1204486-1206385|116|17.83|0.05|8.49|-|0|TNFRSF18,TNFRSF18|1'] 82083 8141 PSYLLTCR True PC9_epitope_Rep5 951.48478770035 951.48368993586 36.254 2 -0.8053046264604499 0.24368443199791054 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 107846 5632 TARKKKKKK True PC9_epitope_Rep5 1114.7662460444199 1114.76514993586 26.663 2 -0.8053163296315344 0.24368443199791054 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 45254 14151 IRSDLKAEA True PC9_epitope_Rep2 1001.55055876105 1001.5499749679301 59.702 1 -0.8053589905326775 0.24368443199791054 1.0 ['ENSG00000104442|ENST00000276569|ARMC1', 'nc|ENSG00000104442|Q9NVT9-2|ARMC1'] 95801 16979 SDELQFGYEVW True NCI_RA007_Epitope_Rep1 1371.5982967991101 1371.5971899358601 70.171 2 -0.8053836042680251 0.24368443199791054 1.0 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 127447 3371 VQSIYHFYQK True NCI_RA007_Epitope_Rep1 1311.6611718391898 1311.65953490379 17.003 3 -0.8053992455549552 0.2436954061348269 1.0 ['ENST00000328965.8_2_11:120100260-120100626:+|nuORF'] 87555 18026 QTLSKLIDYIY True PC9_epitope_Rep2 1355.7336680731098 1355.73256993586 74.642 2 -0.8054241512494628 0.24369930790325156 1.0 ['ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF', 'nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3'] 81865 10026 PSKMRNMFRRK True H1975_Epitope_Rep1 1449.78092721573 1449.77982993586 43.504 2 -0.8054268873057042 0.24369930790325156 1.0 ['ENST00000465878.6_2_16:57792547-57792799:-|nuORF'] 53033 6499 KRTQQEYYERE True NCI_RA007_Epitope_Rep3 1528.7270195528797 1528.72537490379 32.6 3 -0.8054501245650889 0.24369930790325156 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 99380 13740 SLDYYNTCEYP True PC9_epitope_Rep1 1366.53873331766 1366.5376299358602 57.697 2 -0.8054970621878738 0.24372479034270625 1.0 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 67990 10828 LTLSQSHSL True PC9_epitope_Rep2 984.5240096600401 984.52290993586 46.967 2 -0.8055284744881932 0.24375027204271432 1.0 ['ENST00000485832.1_1_7:128446807-128447827:+|nuORF'] 91190 7431 RLQEQFDEQSK True NCI_RA007_Epitope_Rep2 1406.6790067312998 1406.67790993586 33.531 2 -0.8055598500832738 0.24376124426904996 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 22563 9825 ETLTNLRKGYL True H1975_Epitope_Rep3 1306.7245003717399 1306.7234099358602 42.818 2 -0.8056450131969399 0.2438012332245194 1.0 ['nc|ENSG00000074696|Q9P035-2|HACD3', 'ENSG00000074696|ENST00000261875|HACD3'] 129560 8171 VTGFHNWI True NCI_RA007_Epitope_Rep1 972.4817509252399 972.48064993586 35.781 2 -0.8056890983591309 0.24382671270638076 1.0 ['nc|ENSG00000111405|P21128-3|ENDOU', 'nc|ENSG00000111405|P21128-2|ENDOU', 'ENSG00000111405|ENST00000422538|ENDOU'] 33354 9629 GLEDPHVP True PC9_epitope_Rep3 862.41848196234 862.41738993586 41.988 2 -0.8057948519308402 0.24385219144892423 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 118409 12703 VDLSQHLYTFS True H1975_Epitope_Rep1 1308.6350166609998 1308.6339099358602 53.919 2 -0.8058087168828557 0.24386316155988857 1.0 ['nc|ENSG00000186628|A1L4K1-2|FSD2', 'ENSG00000186628|ENST00000334574|FSD2'] 89006 4721 REEAEKPVPP True NCI_RA007_Epitope_Rep3 1150.5982372294598 1150.5965849037902 25.519 3 -0.8058386445967343 0.24386705546125836 1.0 ['ENSG00000049283|ENST00000268933|EPN3'] 91353 3764 RMPGRGKG True PC9_epitope_Rep5 857.4653896684498 857.46428993586 19.563 2 -0.805842624983037 0.24386705546125836 1.0 ['ENST00000342502.6_2_12:99038521-99038740:-|nuORF'] 98209 8590 SIDYVENK True H1975_Epitope_Rep3 966.46582607758 966.46472993586 38.032 2 -0.8058715620866861 0.24386705546125836 1.0 ['ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.R3361Lfs*17|1|0.24|ENSG00000168702|chr2:140444655-140444656|-/A|frameshift_variant', 'LRP1B|p.P3359Qfs*54|1|0.29|ENSG00000168702|chr2:140444661-140444661|G/-|frameshift_variant', 'LRP1B|p.P3292Lfs*121|1|0.15|ENSG00000168702|chr2:140456543-140456543|G/-|frameshift_variant', 'LRP1B|p.C2689Ffs*8|1|0.18|ENSG00000168702|chr2:140516972-140516972|C/-|frameshift_variant', 'LRP1B|p.R2777Dfs*83|1|0.22|ENSG00000168702|chr2:140509997-140509997|G/-|frameshift_variant'] 24822 6261 FCSSWWGYCY True H1975_Epitope_Rep2 1300.46815166004 1300.4670499358601 29.033 2 -0.8058938664232561 0.24389253177044043 1.0 ['CNTN6|p.S419Vfs*33|1|0.22|ENSG00000134115|chr3:1329816-1329817|-/A|frameshift_variant'] 82674 8950 PVMLFFSL True PC9_epitope_Rep2 952.5092115430399 952.50810993586 39.783 2 -0.806078225595733 0.24399054154033628 1.0 ['ENSG00000165152|ENST00000374848|PGAP4'] 97210 8271 SFKFLGSSSP True H1975_Epitope_Rep3 1055.52876068731 1055.52766993586 36.796 2 -0.8061038056498346 0.24399796910132734 1.0 ['ENSG00000187105|ENST00000553558|HEATR4'] 15276 10652 EAGVTGIRRW True H1975_Epitope_Rep1 1143.61489035311 1143.61378993586 45.929 2 -0.8061492706291473 0.24399796910132734 1.0 ['RC3H2|p.R156Pfs*98|1|0.31|ENSG00000056586|chr9:122890428-122890429|-/G|frameshift_variant'] 21400 10238 ERMPEQIRL True PC9_epitope_Rep6 1170.61792712822 1170.61627490379 50.039 3 -0.8061604859925988 0.24400220475182038 1.0 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 119082 5745 VEHQSQLIV True H1975_Epitope_Rep2 1051.56620882519 1051.5651099358602 27.095 2 -0.8062093617776641 0.24400220475182038 1.0 ['nc|ENSG00000171587|O60469-2|DSCAM', 'ENSG00000171587|ENST00000400454|DSCAM'] 81015 19442 PNSWSQAVLP True PC9_epitope_Rep2 1097.5505587610498 1097.54946993586 80.163 2 -0.806215361824503 0.24400220475182038 1.0 ['ENST00000470959.1_1_3:47868940-47872365:+|nuORF'] 14236 6356 DSYSKSGHKPD True NCI_RA007_Epitope_Rep1 1219.54692993259 1219.5458299358602 28.75 2 -0.8062233231393905 0.24400220475182038 1.0 ['ABCB1|p.G1114Afs*33|1|0.14|ENSG00000085563|chr7:87509423-87509423|C/-|frameshift_variant', 'ENSG00000085563|ENST00000622132|ABCB1', 'nc|ENSG00000085563|P08183-2|ABCB1', 'ABCB1|p.D642Mfs*21|1|0.19|ENSG00000085563|chr7:87544964-87544964|A/-|frameshift_variant'] 99160 17594 SLAQLLGKISN True NCI_RA007_Epitope_Rep3 1142.6659228664598 1142.66482993586 77.167 2 -0.8062289718526553 0.24400220475182038 1.0 ['nc|ENSG00000087111|Q96S52-2|PIGS', 'ENSG00000087111|ENST00000308360|PIGS', 'ENST00000487231.5_1_17:26881240-26882135:-|nuORF', 'ENST00000492429.2_1_17:26881240-26883317:-|nuORF'] 50489 1997 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 10.347 3 -0.8062441605285051 0.24400220475182038 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 99179 11464 SLARDLTPEL True PC9_epitope_Rep4 1113.60298825673 1113.60188993586 51.859 2 -0.8062819567355934 0.24400220475182038 1.0 ['ENST00000397898.7_1_21:46226476-46226551:-|nuORF'] 19518 7817 ELQNQMPGP True H1975_Epitope_Rep2 1012.4647805317599 1012.46368993586 35.015 2 -0.8063717423968143 0.2440244822184835 1.0 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'nc|ENSG00000155093|Q92932-3|PTPRN2'] 126676 5361 VPRLVRMK True NCI_RA007_Epitope_Rep4 997.62189030985 997.62078993586 27.188 2 -0.8063723490412488 0.2440244822184835 1.0 ['nc|ENSG00000103005|Q9BQ65-2|USB1', 'ENSG00000103005|ENST00000219281|USB1', 'ENST00000566292.5_1_16:58035387-58044017:+|nuORF', 'ENST00000565662.5_1_16:58035387-58051252:+|nuORF', 'nc|ENSG00000103005|Q9BQ65-3|USB1'] 59605 7047 LGSEPELREK True H1975_Epitope_Rep3 1156.6088019131598 1156.6077099358602 32.072 2 -0.8063909901530323 0.2440244822184835 1.0 ['ACOT9-APOO|2|fusion', 'ENSG00000123130|ENST00000379303|ACOT9', 'nc|ENSG00000123130|Q9Y305-3|ACOT9', 'ACOT9-APOO|1|fusion', 'nc|ENSG00000123130|Q9Y305-2|ACOT9', 'nc|ENSG00000123130|Q9Y305|ACOT9'] 14566 7904 DVETGSGPK True NCI_RA007_Epitope_Rep5 888.4188758851599 888.41776993586 37.096 2 -0.8064155797833528 0.2440244822184835 1.0 ['LTR13A_dup7|chr1:43138776-43139741:+|1.4968869294777094|0.2457820778445239|2.61|497.0|56|3|anti-sense'] 70666 4522 MCTWWDSILR True NCI_RA007_Epitope_Rep5 1309.5947491554898 1309.59310490379 24.047 3 -0.8064160716591448 0.2440244822184835 1.0 ['ENST00000311597.9_1_22:50524051-50524099:-|nuORF'] 86342 16491 QQKLTHNLF True PC9_epitope_Rep3 1127.60874234351 1127.60710490379 68.569 3 -0.8064487526752996 0.2440244822184835 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 11426 9928 DFPMPFISA True PC9_epitope_Rep4 1023.47355431031 1023.47244993586 45.839 2 -0.8064859831541651 0.24403544648943423 1.0 ['nc|ENSG00000186431|P24071-8|FCAR', 'nc|ENSG00000186431|P24071-5|FCAR', 'nc|ENSG00000186431|P24071-4|FCAR', 'nc|ENSG00000186431|P24071-11|FCAR', 'nc|ENSG00000186431|P24071-2|FCAR', 'nc|ENSG00000186431|P24071-10|FCAR', 'ENSG00000186431|ENST00000355524|FCAR', 'nc|ENSG00000186431|P24071-6|FCAR', 'nc|ENSG00000186431|P24071-9|FCAR', 'nc|ENSG00000186431|P24071-3|FCAR'] 80483 18430 PLLERRRGP True PC9_epitope_Rep6 1092.651610215 1092.65050993586 83.534 2 -0.8064986119805198 0.24404641044234954 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1'] 68594 14495 LTYLQLKER True PC9_epitope_Rep5 1162.6710082468999 1162.66936490379 60.755 3 -0.8066175136616295 0.24414085160691495 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 82226 17044 PTIISAPAAP True PC9_epitope_Rep1 936.5280324113198 936.52692993586 70.385 2 -0.8066402179170208 0.24414085160691495 1.0 ['SUGP1|p.P365S|1|0.3|ENSG00000105705|chr19:19297139-19297139|G/A|missense_variant'] 81900 17613 PSLQHCLKRS True NCI_RA007_Epitope_Rep5 1167.61826148139 1167.6166049037902 74.53 3 -0.806705441735768 0.24416277518345564 1.0 ['ENST00000607664.1_1_11:18363085-18363274:+|nuORF'] 54505 8246 LAADPSHP True PC9_epitope_Rep2 806.3922672145 806.39116993586 37.076 2 -0.8067262417706647 0.24416277518345564 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 7631 13716 ASLGDRILL True PC9_epitope_Rep4 956.5654805492 956.56438993586 60.646 2 -0.8067574282391592 0.24421370149080573 1.0 ['ENST00000300403.10_1_20:30327313-30327367:+|nuORF'] 100340 12166 SLMPRAMAI True PC9_epitope_Rep1 988.5197933100799 988.51868993586 51.661 2 -0.8067895655534127 0.24421370149080573 1.0 ['nc|ENSG00000158793|Q86X76-4|NIT1'] 109147 17406 TFLTSYDHI True PC9_epitope_Rep5 1095.52367530687 1095.52256993586 71.952 2 -0.8068648907765449 0.2442791264247803 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF'] 59921 8435 LHKDLKQK True NCI_RA007_Epitope_Rep5 1008.60801406752 1008.60690993586 39.126 2 -0.8068733509188433 0.2442791264247803 1.0 ['ENSG00000023892|ENST00000316637|DEF6'] 115225 15451 TVCQRCWLL True PC9_epitope_Rep3 1120.55215606752 1120.5510499358602 64.585 2 -0.8068998711003649 0.24428654292343388 1.0 ['ENSG00000084092|ENST00000264230|NOA1'] 20512 10254 EPVQQAAVP True PC9_epitope_Rep1 937.4868958753298 937.48578993586 44.325 2 -0.8069018506242752 0.24428654292343388 1.0 ['nc|ENSG00000145014|Q2T9K0-4|TMEM44'] 99826 12355 SLGVCAYELL True PC9_epitope_Rep1 1066.53688284286 1066.53578993586 52.38 2 -0.8069428014137123 0.24429750148634735 1.0 ['ENSG00000171219|ENST00000342711|CDC42BPG'] 90779 21798 RKRRKRKRIRR True PC9_epitope_Rep4 1608.0872948680296 1608.0861899358601 92.04 2 -0.8069851309223203 0.2443084597314463 1.0 ['ENST00000277225.9_3_9:109625513-109685652:+|nuORF'] 105844 11743 SVITATIVFIM True H1975_Epitope_Rep1 1193.67298239285 1193.67188993586 50.162 2 -0.80701062198839 0.24431233234249256 1.0 ['OR10P1|p.M201I|1|0.08|ENSG00000175398|chr12:55637494-55637494|G/C|missense_variant'] 124383 9592 VLEDNSQR True H1975_Epitope_Rep1 959.4672230599099 959.46612993586 41.821 2 -0.8070192860678104 0.24431233234249256 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'MACF1-LYPLA1|1|fusion', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 59011 20091 LGALVSVLSI True PC9_epitope_Rep1 970.60628273202 970.60518993586 82.108 2 -0.8070579789223006 0.24431233234249256 1.0 ['SLC30A2|p.K234Qfs*4|1|0.32|ENSG00000158014|chr1:26039903-26039904|-/G|frameshift_variant', 'nc|ENSG00000158014|Q9BRI3-1|SLC30A2', 'ENSG00000158014|ENST00000374276|SLC30A2'] 15507 9436 EAQSSNFLFPK True H1975_Epitope_Rep3 1266.6244519772997 1266.62334993586 41.297 2 -0.8071119488992048 0.2443307040946526 1.0 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16'] 19650 16511 ELRSGIIR True NCI_RA007_Epitope_Rep3 942.5610638750999 942.5605149679301 72.743 1 -0.8071390073687867 0.2443307040946526 1.0 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1', 'FKBP1A-ACSL1|1|fusion'] 60998 5457 LLALHSAA True NCI_RA007_Epitope_Rep1 794.4650382319401 794.46394993586 25.298 2 -0.807162228124523 0.2443307040946526 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 18866 19324 ELEKIGLNK True PC9_epitope_Rep5 1042.60225998074 1042.60116993586 79.374 2 -0.8071730624475455 0.2443416607461323 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A', 'ENST00000468534.1_1_2:55559700-55561478:-|nuORF'] 96469 10253 SEITGAQG True H1975_Epitope_Rep3 761.3555473526101 761.3549949679301 44.486 1 -0.8072125405404139 0.24434553152003713 1.0 ['nc|ENSG00000157060|Q9BZQ2-2|SHCBP1L', 'ENSG00000157060|ENST00000367547|SHCBP1L'] 97490 12202 SGNQFSLV True PC9_epitope_Rep5 850.4184819623399 850.41738993586 51.92 2 -0.8072127194166557 0.24434553152003713 1.0 ['XRCC2|p.S250G|1|0.08|ENSG00000196584|chr7:152648737-152648737|T/C|missense_variant'] 27393 10528 FNDGNAAVV True PC9_epitope_Rep2 905.4242956187699 905.42374496793 45.818 1 -0.8072180170839426 0.24434553152003713 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 124404 7571 VLEENAQKKR True H1975_Epitope_Rep1 1213.6778845324898 1213.6767899358601 34.112 2 -0.8072226554816619 0.2443529445878157 1.0 ['ENSG00000166887|ENST00000318006|VPS39', 'nc|ENSG00000166887|Q96JC1|VPS39', 'ENST00000562258.5_1_15:42452954-42456706:-|nuORF'] 63919 13594 LPWARELESRE True PC9_epitope_Rep2 1384.70991293676 1384.70880993586 57.578 2 -0.8072537179016657 0.2443529445878157 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 17575 10167 EHLCPAALSGM True H1975_Epitope_Rep1 1127.5103508251898 1127.50924993586 44.047 2 -0.8073338016926532 0.24441126156165735 1.0 ['chr4:15790918-15816511|135|20.32|0.09|7.8|+|2|TE_info:SVA_D,SVA_D_dup355,SVA,Retroposon,donor,+,15790204,15790918|None,CD38|7'] 66640 14855 LSSRLRLDPV True NCI_RA007_Epitope_Rep1 1154.6771562565 1154.6760499358602 61.841 2 -0.807344250093928 0.24441126156165735 1.0 ['ENSG00000158008|ENST00000374280|EXTL1'] 31066 5240 GAVVLLVLSCQ True NCI_RA007_Epitope_Rep1 1100.6263665536 1100.6252699358602 24.465 2 -0.8074081991654697 0.24441126156165735 1.0 ['ENST00000552941.5_3_14:65528035-65528353:+|nuORF'] 65563 11848 LSGFQGDFLWP True PC9_epitope_Rep6 1265.6080736371696 1265.60641490379 56.779 3 -0.8074120539822184 0.24441126156165735 1.0 ['ENSG00000244165|ENST00000321826|P2RY11'] 16863 6656 EFSVCGLYR True NCI_RA007_Epitope_Rep2 1072.5011660404798 1072.5000699358602 30.502 2 -0.8074523384056407 0.24443671262268227 1.0 ['NOBOX|p.P38S|1|0.37|ENSG00000106410|chr7:144404654-144404654|G/A|missense_variant'] 41326 18827 IAKNIYII True PC9_epitope_Rep5 946.5851533646198 946.58404993586 77.433 2 -0.8074982032640987 0.2444766599014207 1.0 ['ENST00000374884.2_2_X:62570747-62571134:-|nuORF'] 127487 16226 VQTLRWQRWQR True H1975_Epitope_Rep1 1555.84841252859 1555.84730993586 67.761 2 -0.807534402020542 0.24450210927646743 1.0 ['ENSG00000167895|ENST00000318430|TMC8'] 58434 6135 LEWDMEKEL True PC9_epitope_Rep4 1191.5481758025498 1191.54652490379 30.613 3 -0.8075637877325766 0.24452755791365863 1.0 ['NAALADL2-ABCC5|1|fusion', 'nc|ENSG00000177694|Q58DX5-2|NAALADL2', 'ENST00000485853.5_1_3:174577149-174974391:+|nuORF', 'ENST00000473253.5_1_3:174581768-175298945:+|nuORF', 'NAALADL2|p.I703Dfs*4|1|0.12|ENSG00000177694|chr3:175755333-175755343|CCCATCCGCAT/-|frameshift_variant', 'ENSG00000177694|ENST00000454872|NAALADL2'] 128237 25103 VRVSSIGV True PC9_epitope_Rep1 815.4865019525099 815.4859549679301 101.44 1 -0.8077583277778589 0.24458199846338954 1.0 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant'] 113423 10301 TQMKCFLFG True PC9_epitope_Rep1 1073.50380889277 1073.5027099358601 44.507 2 -0.8078346775215546 0.2446183953033268 1.0 ['ENSG00000158077|ENST00000299481|NLRP14'] 24925 24338 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 100.8 2 -0.8078569455125648 0.2446183953033268 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 139980 25420 YVIVRCLNLK True PC9_epitope_Rep3 1219.7110992370701 1219.7100099358602 103.22 2 -0.8078618882821638 0.2446293450845099 1.0 ['ENSG00000140526|ENST00000352732|ABHD2'] 82344 16126 PTSVLFSSAS True PC9_epitope_Rep3 994.4971262058601 994.49602993586 67.177 2 -0.8079161152759311 0.24463674842001507 1.0 ['ENSG00000254726|ENST00000532414|MEX3A'] 93684 23269 RTKRHKNNR True PC9_epitope_Rep4 1208.6962689916397 1208.69461490379 97.756 3 -0.8079268360972952 0.24463674842001507 1.0 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 61078 5194 LLAVSHVG True PC9_epitope_Rep6 794.46503823194 794.46394993586 27.734 2 -0.8079292496015064 0.2446476974590152 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 23292 5597 EVSARSPVP True H1975_Epitope_Rep3 940.4977949121999 940.49668993586 26.569 2 -0.8079550465348845 0.2446586461806059 1.0 ['ENST00000317204.10_1_11:1297899-1298181:-|nuORF'] 77962 7473 PALDLSSPPA True H1975_Epitope_Rep3 966.5022115863 966.50110993586 33.724 2 -0.8079900586420915 0.24466959458480092 1.0 ['ENSG00000179270|ENST00000331664|PCARE'] 130045 19108 VTPTPAKRRKV True NCI_RA007_Epitope_Rep4 1251.7775390041102 1251.77644993586 82.646 2 -0.8079980737618829 0.24467699621700753 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1'] 71598 17072 MLKKQRWVKKN True NCI_RA007_Epitope_Rep3 1457.8653084626897 1457.86366490379 75.019 3 -0.8080323119078495 0.24467699621700753 1.0 ['ENST00000368886.9_1_10:124758104-124758158:-|nuORF'] 114519 10884 TSGLPLESP True PC9_epitope_Rep2 899.46001242115 899.45890993586 47.182 2 -0.8081371962640551 0.24468825183338647 1.0 ['ENST00000157600.7_2_3:8579052-8590296:+|nuORF'] 130655 25441 VVAVAGTIIL True PC9_epitope_Rep5 954.61136811246 954.6108149679301 103.09 1 -0.8081505534136674 0.24468825183338647 1.0 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 136774 21828 YIRAGTRRP True PC9_epitope_Rep3 1088.6203100867199 1088.61920993586 89.262 2 -0.8081644811133037 0.24468825183338647 1.0 ['ENST00000254958.9_1_20:10654138-10654354:-|nuORF'] 50492 2200 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 11.387 3 -0.8081862830143355 0.24468825183338647 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 41543 8656 IDDPDGLK True H1975_Epitope_Rep3 871.4287122928699 871.42760993586 38.291 2 -0.8081982838751849 0.24468825183338647 1.0 ['CON__Q2UVX4'] 31009 7999 GAVAHTGEALS True PC9_epitope_Rep4 1011.4985231881899 1011.4974299358599 38.218 2 -0.8082918709760293 0.24470659845509485 1.0 ['ENST00000479169.5_1_2:242177863-242181895:-|nuORF'] 120428 13410 VFTMQWFLTLF True PC9_epitope_Rep1 1431.7260805948697 1431.7244249037901 56.443 3 -0.80829255350319 0.24470659845509485 1.0 ['nc|ENSG00000288591|Q9Y2I9-3|TBC1D30', 'ENSG00000111490|ENST00000539867|TBC1D30', 'nc|ENSG00000288591|Q9Y2I9-4|TBC1D30', 'nc|ENSG00000288591|Q9Y2I9|TBC1D30'] 20178 9770 ENQRMLKSV True PC9_epitope_Rep4 1103.57572796307 1103.57462993586 45.221 2 -0.8083169867374022 0.24470659845509485 1.0 ['ENSG00000256087|ENST00000221315|ZNF432'] 25662 22678 FFCDDGCC True H1975_Epitope_Rep3 908.2502966320399 908.24918993586 94.77 2 -0.8084235617556244 0.244761021419669 1.0 ['ENSG00000120256|ENST00000239367|LRP11'] 112180 15952 TLVTQNSGV True PC9_epitope_Rep6 917.4818104948899 917.48070993586 73.655 2 -0.8084502960520963 0.24480095068330363 1.0 ['JUP-LEPREL4|2|fusion', 'JUP-LEPREL4|3|fusion', 'ENSG00000173801|ENST00000393931|JUP'] 79093 5809 PFVMWFFKQK True NCI_RA007_Epitope_Rep3 1356.7052855806398 1356.70363490379 29.825 3 -0.808558184041331 0.24482638687612313 1.0 ['ENSG00000149564|ENST00000278927|ESAM'] 100120 8685 SLLC[Carbamidomethyl]RVHELE True H1975_Epitope_Rep3 1254.6390567750502 1254.6379499358602 38.405 2 -0.8086412422164275 0.2448518223317151 1.0 ['ENSG00000196169|ENST00000389916|KIF19'] 134605 15195 WWDIYYTLFEK True NCI_RA007_Epitope_Rep2 1562.7445671099797 1562.74346993586 63.797 2 -0.8086551006369073 0.24486276555661826 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 6201 6762 APQYYDMSNFP True H1975_Epitope_Rep2 1331.54923843171 1331.54814993586 30.925 2 -0.8087118412746483 0.24489559332840644 1.0 ['ENSG00000109606|ENST00000336812|DHX15', 'ENST00000512903.1_1_4:24529549-24534804:-|nuORF', 'ENST00000508032.5_1_4:24529549-24538851:-|nuORF'] 26657 4057 FLAMKWMITEC True NCI_RA007_Epitope_Rep1 1371.63892246659 1371.63727490379 19.837 3 -0.8087697938523531 0.24489559332840644 1.0 ['ENSG00000125445|ENST00000245539|MRPS7'] 69154 18680 LVLQRVLPS True PC9_epitope_Rep5 1023.6440652230699 1023.6429699358599 76.873 2 -0.8087879695492759 0.24489559332840644 1.0 ['ENST00000306353.7_2_2:85828206-85829758:-|nuORF', 'ENST00000425160.1_1_2:85828206-85828698:-|nuORF'] 50493 2270 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 11.737 3 -0.8088398819278361 0.24489588918029936 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 84138 6533 QEQRQCLRR True NCI_RA007_Epitope_Rep1 1215.6254721201499 1215.6243699358602 29.426 2 -0.8089534488972588 0.24489588918029936 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40', 'ENST00000555232.5_1_14:21538555-21549271:+|nuORF'] 58001 8502 LEQYRLYQAQA True H1975_Epitope_Rep3 1381.6990138998901 1381.69790993586 37.689 2 -0.8089745179686952 0.24489588918029936 1.0 ['TTC30B|p.A478Cfs*6|1|0.11|ENSG00000196659|chr2:177551332-177551333|-/A|frameshift_variant', 'TTC30A|p.A478Cfs*6|1|0.12|ENSG00000197557|chr2:177617270-177617271|-/A|frameshift_variant', 'ENSG00000197557|ENST00000355689|TTC30A', 'ENSG00000196659|ENST00000408939|TTC30B'] 9313 11976 AVSFGSLQGAF True PC9_epitope_Rep1 1082.5396597241797 1082.53856993586 50.928 2 -0.8089747728060309 0.24489588918029936 1.0 ['ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS'] 104650 6842 SSYQLKIR True NCI_RA007_Epitope_Rep5 993.5607295219299 993.55962993586 33.003 2 -0.8090115429276731 0.2449213203118208 1.0 ['ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.T3539Sfs*28|1|0.35|ENSG00000086570|chr5:151521979-151521980|-/ATGAA|frameshift_variant'] 64272 20124 LQLKEKKREKT True NCI_RA007_Epitope_Rep5 1399.8510978671898 1399.85000993586 84.351 2 -0.8090596383942373 0.2449396525493719 1.0 ['nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 120464 6438 VFVFFWWRWGF True H1975_Epitope_Rep1 1575.78156175539 1575.7799249037898 29.825 3 -0.8090716768098581 0.2449396525493719 1.0 ['SVA_E_dup408|chr10:31969059-31970051:+|2.2329970574096665|0.275459818795955|3.02|498.0|17|3|sense', 'SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|18|2|sense', 'chr5:76812310-76832690|245|10.41|0.13|6.32|+|0|TE_info:SVA_D,SVA_D_dup452,SVA,Retroposon,donor,+,76811569,76812310|None,F2RL1|2'] 134781 9715 WYFWRRHVFIW True PC9_epitope_Rep5 1694.8622716875798 1694.86063490379 42.336 3 -0.8090862472645189 0.2449396525493719 1.0 ['ENSG00000187688|ENST00000338560|TRPV2', 'ENST00000441875.1_1_17:16330801-16331912:+|nuORF'] 130656 25613 VVAVAGTIIL True PC9_epitope_Rep5 954.61136811246 954.6108149679301 103.85 1 -0.8091195542325199 0.24495059259903212 1.0 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 6574 13058 APVVRARA True PC9_epitope_Rep1 838.5137197598599 838.51262993586 55.095 2 -0.8092432810270614 0.24500144885540423 1.0 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44'] 95045 13234 RYRNLWEHYYK True H1975_Epitope_Rep3 1626.8055446571 1626.80444993586 56.16 2 -0.809258272501612 0.24500144885540423 1.0 ['ENSG00000113966|ENST00000463745|ARL6', 'nc|ENSG00000113966|Q9H0F7-2|ARL6'] 52159 20403 KLVVIERDL True PC9_epitope_Rep1 1083.6651945904698 1083.6640899358601 83.293 2 -0.8093262972050819 0.24504136422248302 1.0 ['ENST00000338274.4_1_2:26032960-26033152:-|nuORF'] 57604 14519 LELLMSSKMA True PC9_epitope_Rep5 1121.5824531362903 1121.58134993586 60.846 2 -0.809359136711506 0.2450452016689847 1.0 ['ENST00000467530.5_1_1:85960653-85960731:-|nuORF'] 58124 8081 LESAEDSFK True H1975_Epitope_Rep3 1024.47130538084 1024.47020993586 36.057 2 -0.8094250613378582 0.2450452016689847 1.0 ['nc|ENSG00000182010|Q8IZC4-2|RTKN2', 'ENSG00000182010|ENST00000373789|RTKN2'] 101095 10292 SLVAEHLP True PC9_epitope_Rep5 864.4705175352 864.46942993586 44.575 2 -0.8094516583174867 0.2450452016689847 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47666536-47687014:-|nuORF'] 122365 15290 VGSDYYIQL True PC9_epitope_Rep5 1056.51277627 1056.51166993586 63.822 2 -0.8095566687178467 0.24511408909815285 1.0 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 79549 17257 PGSMKRMLESV True PC9_epitope_Rep6 1233.62096390333 1233.6193049037902 78.977 3 -0.809578349825952 0.24512147420574557 1.0 ['nc|ENSG00000146151|Q8TB92-5|HMGCLL1', 'ENSG00000146151|ENST00000274901|HMGCLL1', 'nc|ENSG00000146151|Q8TB92|HMGCLL1'] 22957 8292 EVHVDPVGP True H1975_Epitope_Rep2 947.4712458111898 947.47014993586 36.846 2 -0.8095949251124747 0.24512147420574557 1.0 ['ENSG00000105696|ENST00000262817|TMEM59L', 'ENST00000598660.1_1_19:18723732-18729158:+|nuORF'] 55614 20078 LCTRAVRTRLF True PC9_epitope_Rep1 1334.76050904098 1334.75887490379 82.058 3 -0.809633460000566 0.24513241003650693 1.0 ['ENSG00000180758|ENST00000377411|GPR157'] 90854 7767 RKWDPKSLEI True NCI_RA007_Epitope_Rep5 1270.70337100434 1270.70173490379 36.572 3 -0.8097114566628887 0.24517231888047053 1.0 ['CTNNA2|p.L10R|1|0.09|ENSG00000066032|chr2:79651585-79651585|T/G|missense_variant'] 92962 21112 RRPTPLGG True PC9_epitope_Rep2 852.4929843152798 852.49188993586 86.667 2 -0.8097641076477907 0.24518325365782992 1.0 ['KIAA1755|p.H733Tfs*30|1|0.28|ENSG00000149633|chr20:38223609-38223609|G/-|frameshift_variant'] 80369 19162 PLGQLEPV True PC9_epitope_Rep2 851.47526856247 851.47416993586 79.08 2 -0.8098018863254706 0.2451982965902836 1.0 ['ENST00000484513.1_1_3:38180924-38181542:+|nuORF'] 134043 24901 WQGRRLAL True H1975_Epitope_Rep3 998.5773826455799 998.57628993586 103.59 2 -0.8098100079717869 0.2451982965902836 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 56126 23338 LDLVKNRMQL True PC9_epitope_Rep1 1228.69617744892 1228.69508993586 94.56 2 -0.8098536073045228 0.2451982965902836 1.0 ['ENSG00000108528|ENST00000225665|SLC25A11', 'ENST00000574710.1_1_17:4841038-4842521:-|nuORF'] 58101 13671 LERSWHLL True PC9_epitope_Rep4 1052.5767139392399 1052.57560993586 60.477 2 -0.8098682333971902 0.2451982965902836 1.0 ['nc|ENSG00000204482|O00453-13|LST1', 'nc|ENSG00000204482|O00453-11|LST1'] 64168 7909 LQGMNSSNR True H1975_Epitope_Rep3 1005.4661775140901 1005.46567496793 35.395 1 -0.809880459563003 0.2451982965902836 1.0 ['ENST00000273480.3_1_3:141464146-141464272:+|nuORF'] 18480 18970 EKLLPDLEV True PC9_epitope_Rep6 1054.5910265907 1054.58992993586 85.613 2 -0.8098981670804436 0.2451982965902836 1.0 ['ENSG00000167880|ENST00000301607|EVPL'] 42032 11007 IEDYDVIAS True PC9_epitope_Rep1 1023.4760564081099 1023.4749499358601 47.227 2 -0.8099035771193002 0.2451982965902836 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 134619 9683 WWFRWRLDRYV True NCI_RA007_Epitope_Rep1 1681.8629999635698 1681.8613649037902 41.665 3 -0.8099038821196808 0.2451982965902836 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 52038 2621 KLGSYVFKK True NCI_RA007_Epitope_Rep5 1068.6331661861998 1068.63206993586 14.77 2 -0.8099129400649683 0.24519857478056836 1.0 ['ENST00000491545.5_1_22:41175111-41195081:-|nuORF'] 36853 8382 GVPVAHAL True PC9_epitope_Rep4 762.4388234841 762.43772993586 39.699 2 -0.8099537446241548 0.24519857478056836 1.0 ['ENSG00000124608|ENST00000244571|AARS2'] 32548 6880 GGTEPVVE True NCI_RA007_Epitope_Rep5 786.37594844402 786.37484993586 33.144 2 -0.8100596901482967 0.24519857478056836 1.0 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 66130 8501 LSPAWMPA True H1975_Epitope_Rep1 871.42621019507 871.42510993586 37.629 2 -0.8101002939802217 0.24519857478056836 1.0 ['ENSG00000122678|ENST00000242248|POLM', 'nc|ENSG00000122678|Q9NP87-2|POLM', 'nc|ENSG00000122678|Q9NP87-3|POLM'] 106232 12683 SVPQAFSP True H1975_Epitope_Rep3 831.41266830591 831.41211496793 53.995 1 -0.8101104215806657 0.24520950711875208 1.0 ['ENST00000424011.6_2_16:66646756-66647017:+|nuORF'] 136601 7107 YHYRLDWLMWF True NCI_RA007_Epitope_Rep4 1628.7598403346399 1628.7581849037902 33.957 3 -0.8101610973109539 0.2452168875371135 1.0 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 100368 7514 SLNIKTTVP True NCI_RA007_Epitope_Rep1 971.56514619603 971.56404993586 33.22 2 -0.8101784435216248 0.2452168875371135 1.0 ['ENSG00000135406|ENST00000257860|PRPH', 'nc|ENSG00000135406|P41219-2|PRPH'] 106117 9000 SVNGYTFGSL True NCI_RA007_Epitope_Rep3 1043.49237517859 1043.4912699358601 42.5 2 -0.810207503133344 0.24522781913506939 1.0 ['ENSG00000047457|ENST00000264613|CP', 'ENST00000490639.5_1_3:148895590-148939579:-|nuORF'] 33382 13933 GLEVFPGD True H1975_Epitope_Rep3 832.3966838885998 832.39613496793 58.907 1 -0.8102422929439377 0.24523875041638304 1.0 ['ENSG00000187510|ENST00000344636|PLEKHG7'] 84582 7589 QHDKLNLGPAI True NCI_RA007_Epitope_Rep2 1204.6564208119198 1204.6553299358602 34.143 2 -0.8102690936685203 0.24523902622699165 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 27401 10895 FNDGNAAVV True PC9_epitope_Rep5 905.4242956187699 905.42374496793 46.896 1 -0.810284007965677 0.24523902622699165 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 46014 9390 ISVEKGYNITM True H1975_Epitope_Rep1 1253.6325741328499 1253.6314699358602 41.03 2 -0.8103237720295967 0.24523902622699165 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3', 'nc|ENSG00000164796|Q7Z407-5|CSMD3', 'CSMD3|p.S3015Lfs*14|2|0.38|ENSG00000164796|chr8:112289471-112289471|C/-|frameshift_variant', 'CSMD3|p.V3191Lfs*17|1|0.3|ENSG00000164796|chr8:112265528-112265528|C/-|frameshift_variant', 'CSMD3|p.H3450Qfs*4|1|0.18|ENSG00000164796|chr8:112244445-112244446|TA/-|frameshift_variant', 'CSMD3|p.N3536Kfs*11|1|0.15|ENSG00000164796|chr8:112237209-112237210|-/T|frameshift_variant'] 135483 19325 YEDEYVLEDL True PC9_epitope_Rep6 1286.55542892762 1286.55432993586 86.983 2 -0.8103254010793006 0.24523902622699165 1.0 ['ENSG00000181789|ENST00000314797|COPG1'] 125077 24806 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 107.26 3 -0.8103744506500784 0.24524285341906335 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 58442 5458 LEWIRKHHPYD True PC9_epitope_Rep1 1492.75753183552 1492.75588490379 25.828 3 -0.8103778682295284 0.24524285341906335 1.0 ['ENSG00000197299|ENST00000355112|BLM'] 68013 9608 LTMFCTTNSL True PC9_epitope_Rep3 1129.5147674992902 1129.51312490379 41.908 3 -0.8104087109571646 0.24524285341906335 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 5650 18068 APAIQKAEI True PC9_epitope_Rep1 939.5389314481899 939.53782993586 74.291 2 -0.8104882770039761 0.24524695558998566 1.0 ['nc|ENSG00000277399|Q6PRD1|GPR179', 'ENSG00000277399|ENST00000616987|GPR179'] 68142 21190 LTPPFQIF True PC9_epitope_Rep4 961.5273041353299 961.52620993586 89.671 2 -0.8104908285488828 0.24524695558998566 1.0 ['ENST00000565736.1_1_16:29815990-29816668:+|nuORF'] 46705 8080 ITYGNECHLC-[Carbamidomethyl] True H1975_Epitope_Rep3 1208.4954293164699 1208.4943299358602 36.054 2 -0.8105311118261044 0.24524695558998566 1.0 ['ENSG00000145879|ENST00000274565|SPINK7'] 15773 10297 EDFEQKYNFRF True PC9_epitope_Rep1 1521.6888431390096 1521.68719490379 44.493 3 -0.8105374707884527 0.24524695558998566 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 18308 6132 EITGAGGK True NCI_RA007_Epitope_Rep2 731.38136817763 731.3808149679301 28.459 1 -0.8105428447780412 0.24524695558998566 1.0 ['ENSG00000101347|ENST00000646673|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1'] 112232 16873 TLWTPLTPNY True PC9_epitope_Rep5 1204.6128246644398 1204.61172993586 69.912 2 -0.810557750313482 0.24524695558998566 1.0 ['ENSG00000170684|ENST00000303809|ZNF296'] 54781 8622 LAETRELVA True H1975_Epitope_Rep3 1000.5553097883198 1000.55420993586 38.158 2 -0.8105740690462983 0.24524695558998566 1.0 ['ENSG00000105723|ENST00000222330|GSK3A'] 134046 23979 WQGRRLAL True NCI_RA007_Epitope_Rep3 998.5773826455799 998.57628993586 103.88 2 -0.8106362989185517 0.24525788421997624 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF', 'ENSG00000213563|ENST00000524821|C8orf82'] 136138 6650 YGGLRGAI True PC9_epitope_Rep2 805.4446371405298 805.44354993586 30.987 2 -0.8107111054970723 0.245261709983349 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 128619 10812 VSKYSQAVP True PC9_epitope_Rep6 977.5181960036098 977.51708993586 52.436 2 -0.8107172982011552 0.245261709983349 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 139649 6455 YTSETYLMKHM True NCI_RA007_Epitope_Rep2 1402.6261088534202 1402.6250099358601 29.717 2 -0.8107225640695308 0.245261709983349 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 13175 15701 DLTDEEKQEYL True H1975_Epitope_Rep2 1381.62490546977 1381.6238099358602 65.563 2 -0.8107415844070154 0.24528711667101033 1.0 ['ENST00000469334.5_1_17:38788437-38802054:-|nuORF', 'nc|ENSG00000073584|Q969G3-6|SMARCE1', 'nc|ENSG00000073584|Q969G3-5|SMARCE1', 'chr17:40628975-40630714|502|43.13|0.3|7.17|-|ENST00000644527|SMARCE1,SMARCE1', 'nc|ENSG00000073584|Q969G3-3|SMARCE1', 'nc|ENSG00000073584|Q969G3-2|SMARCE1', 'nc|ENSG00000073584|Q969G3-4|SMARCE1', 'ENSG00000073584|ENST00000348513|SMARCE1', 'ENST00000493660.5_1_17:38792069-38802054:-|nuORF'] 115744 16303 TVLMLADQ True PC9_epitope_Rep4 889.4579042461698 889.45680993586 70.67 2 -0.810767959869256 0.24532700131756122 1.0 ['nc|ENSG00000113712|P48729-3|CSNK1A1', 'ENSG00000113712|ENST00000377843|CSNK1A1', 'nc|ENSG00000113712|P48729-2|CSNK1A1', 'ENSG00000180138|ENST00000379800|CSNK1A1L'] 28737 15922 FSWFWFRLYWF True NCI_RA007_Epitope_Rep2 1683.8026911227896 1683.8015899358602 66.651 2 -0.8107845627844213 0.24535240632420224 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 35154 11060 GSDAGQCPEGY True H1975_Epitope_Rep2 1082.3974888175799 1082.39638993586 47.573 2 -0.8108032705810451 0.24536333231985405 1.0 ['COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A'] 132249 15810 VYKTIMEQF True PC9_epitope_Rep6 1157.57908200801 1157.5779899358602 73.076 2 -0.8108756555556113 0.24541058605513089 1.0 ['nc|ENSG00000175866|Q9UQB8-3|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-5|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-4|BAIAP2', 'nc|ENSG00000175866|Q9UQB8-6|BAIAP2', 'ENSG00000175866|ENST00000428708|BAIAP2', 'nc|ENSG00000175866|Q9UQB8|BAIAP2', 'BAIAP2|p.E174Lfs*138|1|0.52|ENSG00000175866|chr17:81099958-81099968|GAGCTGGAGAA/-|frameshift_variant', 'ENST00000575989.5_1_17:79009009-79027584:+|nuORF', 'ENST00000570913.5_1_17:79009009-79050117:+|nuORF'] 73670 8115 NGLVGDQLAP True H1975_Epitope_Rep3 982.5083595958998 982.50726993586 36.19 2 -0.8108778268912327 0.24541058605513089 1.0 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|97|2|anti-sense'] 43756 6678 IIVYLDVP True NCI_RA007_Epitope_Rep5 930.5426198462999 930.54152993586 32.355 2 -0.8108896974432616 0.24541058605513089 1.0 ['ENSG00000185875|ENST00000376356|THNSL1'] 43702 12298 IIQFIRHWRQW True H1975_Epitope_Rep3 1581.8680853440098 1581.8669899358601 52.485 2 -0.8109570646888046 0.24543598801268224 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.G158Sfs*29|1|0.37|ENSG00000081248|chr1:201092040-201092042|CCG/AA|frameshift_variant', 'CACNA1S|p.G577Afs*35|2|0.19|ENSG00000081248|chr1:201077017-201077017|C/-|frameshift_variant'] 68184 18414 LTQEQNFSQDV True PC9_epitope_Rep1 1307.59935942827 1307.5977149037901 75.62 3 -0.8110238505891462 0.24545783568584872 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 10839 4714 DAINKNQVP True NCI_RA007_Epitope_Rep5 997.51925863277 997.51816993586 24.817 2 -0.8110493708989929 0.24545783568584872 1.0 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 79288 8794 PGHTWEEAP True PC9_epitope_Rep6 1022.4457593393399 1022.4446699358599 43.727 2 -0.8110559014371835 0.24546165204551376 1.0 ['ENSG00000100385|ENST00000216223|IL2RB'] 63368 8994 LPFCHLWVP True H1975_Epitope_Rep3 1110.56845775466 1110.5673699358601 39.59 2 -0.8110606526554354 0.24546165204551376 1.0 ['ENSG00000268738|ENST00000598963|HSFX2', 'ENSG00000171116|ENST00000370416|HSFX1'] 20056 7913 ENDVCIPAP True H1975_Epitope_Rep2 956.4273323938799 956.42622993586 35.385 2 -0.8110630028002856 0.24546165204551376 1.0 ['ENST00000524666.5_1_11:65113686-65113899:+|nuORF'] 79939 6973 PIRFQWWLVP True NCI_RA007_Epitope_Rep2 1340.7393625902398 1340.73772490379 31.745 3 -0.8111482659859112 0.24549086592744854 1.0 ['ENSG00000105675|ENST00000262623|ATP4A'] 117324 9191 VAAKKAGL True PC9_epitope_Rep6 756.4857736765199 756.48466993586 45.484 2 -0.8111535158411577 0.24549086592744854 1.0 ['SH3TC1|p.G548V|1|0.31|ENSG00000125089|chr4:8227337-8227337|G/T|missense_variant'] 67179 8746 LTDGIWSQIK True H1975_Epitope_Rep1 1159.62372370131 1159.62262993586 38.572 2 -0.8111576704035901 0.24549086592744854 1.0 ['ENSG00000144591|ENST00000313597|GMPPA', 'nc|ENSG00000144591|Q96IJ6-2|GMPPA', 'ENST00000481170.1_1_2:220369965-220370208:+|nuORF'] 60686 13057 LIVSTKEEL True PC9_epitope_Rep6 1030.5910265906998 1030.58992993586 61.827 2 -0.8111868670176058 0.24549086592744854 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 134583 25496 WVVRLGGRG True PC9_epitope_Rep3 998.5773826455797 998.57628993586 103.53 2 -0.8112180081283222 0.2455127091656534 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 56090 5664 LDLKGNLAP True H1975_Epitope_Rep3 939.5389314481899 939.53782993586 26.816 2 -0.8112195816462326 0.2455127091656534 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|182|3|sense'] 115331 5925 TVEARLHM[Oxidation]PMY True H1975_Epitope_Rep2 1362.64242800434 1362.64132993586 27.775 2 -0.8112533567400387 0.24552363031048707 1.0 ['OR2AG1|p.M51V|1|0.21|ENSG00000279486|chr11:6785188-6785188|A/G|missense_variant'] 38876 18656 HIIENIVAV True PC9_epitope_Rep3 1006.58113061334 1006.58002993586 76.98 2 -0.8112999971821981 0.24554547165168555 1.0 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1', 'nc|ENSG00000171490|O76021-2|RSL1D1', 'ENST00000574823.5_1_16:11935494-11935832:-|nuORF'] 19047 5853 ELGPDGHPGP True PC9_epitope_Rep1 974.4457593393399 974.44466993586 27.327 2 -0.8113236659428378 0.24554547165168555 1.0 ['nc|ENSG00000135424|Q13683-9|ITGA7', 'ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7'] 88134 20856 QWMKKRWEMKR True NCI_RA007_Epitope_Rep2 1605.8384420918499 1605.8373499358602 86.256 2 -0.8113520617751302 0.2455457295450927 1.0 ['ACE2|p.W477R|1|0.49|ENSG00000130234|chrX:15575679-15575679|A/G|missense_variant'] 33783 5887 GLSRYHPYGK True NCI_RA007_Epitope_Rep1 1176.6039913162401 1176.60288993586 26.951 2 -0.8113532006788711 0.2455457295450927 1.0 ['ZNF703|p.G568Dfs*14|1|0.18|ENSG00000183779|chr8:37698603-37698603|G/-|frameshift_variant', 'ZNF703|p.G558Afs*24|1|0.13|ENSG00000183779|chr8:37698569-37698569|G/-|frameshift_variant', 'ENSG00000183779|ENST00000331569|ZNF703'] 94287 14107 RWSQPWRWRYW True H1975_Epitope_Rep1 1705.8378478448897 1705.83674993586 59.432 2 -0.8113615899283195 0.2455457295450927 1.0 ['ENST00000380009.8_1_5:94890875-94891094:+|nuORF'] 128821 22443 VSRVSRTL True PC9_epitope_Rep2 916.54541381096 916.54430993586 91.815 2 -0.811376040721087 0.2455457295450927 1.0 ['ENST00000528173.5_1_11:46390827-46391010:+|nuORF'] 42746 6278 IFDYLLHQYSK True H1975_Epitope_Rep1 1425.7292513990099 1425.72760490379 29.216 3 -0.8114107772031649 0.24557493306317388 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 98730 18830 SIRRVYTRL True NCI_RA007_Epitope_Rep5 1162.69347502698 1162.69183490379 79.274 3 -0.8114141266221709 0.24557493306317388 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 116000 9380 TVQTKFMELLE True H1975_Epitope_Rep3 1337.6900890089698 1337.68898993586 41.08 2 -0.8114270596174751 0.24557493306317388 1.0 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 33746 11624 GLSEEKPLSVP True NCI_RA007_Epitope_Rep1 1154.6183039676998 1154.61720993586 49.186 2 -0.8114332688641976 0.24557493306317388 1.0 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19243367-19249269:-|nuORF', 'nc|ENSG00000064545|Q9NX61-2|TMEM161A'] 47957 20637 KAASLLSP True PC9_epitope_Rep1 785.46470387877 785.46360993586 84.201 2 -0.8114395244923767 0.24558229735010204 1.0 ['ENST00000378103.7_3_9:35748784-35748955:-|nuORF'] 111176 12360 TLFCQDGRLL True PC9_epitope_Rep4 1164.59612905448 1164.59449490379 55.349 3 -0.8114478866051656 0.24558229735010204 1.0 ['ENSG00000162621|ENST00000294635|LRRC53'] 16126 13804 EEEELASTPP True H1975_Epitope_Rep2 1100.4873493677999 1100.48624993586 58.244 2 -0.8115371062131583 0.24558991650145434 1.0 ['ENSG00000149136|ENST00000278412|SSRP1'] 10532 5481 CPPCPPEQR True H1975_Epitope_Rep3 1025.44227126537 1025.4411699358602 26.135 2 -0.811557091205728 0.24558991650145434 1.0 ['ENST00000449552.6_1_17:18601353-18601506:+|nuORF'] 101264 21694 SLWPPLVLIGI True PC9_epitope_Rep3 1206.7376312547399 1206.73652993586 88.739 2 -0.8115643228581192 0.24558991650145434 1.0 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9', 'SLC12A9|p.G497Rfs*4|1|0.28|ENSG00000146828|chr7:100861535-100861536|-/A|frameshift_variant', 'ENST00000487651.5_1_7:100457471-100457768:+|nuORF', 'ENST00000448342.5_1_7:100456529-100458660:+|nuORF', 'ENST00000475623.1_1_7:100456676-100458183:+|nuORF'] 70185 19759 LYLKWALEEY True PC9_epitope_Rep2 1326.6859896047 1326.6848899358602 81.391 2 -0.8115958804285759 0.24558991650145434 1.0 ['ENSG00000112936|ENST00000313164|C7', 'NDUFS6-C7|1|fusion'] 121052 4561 VGFLWIHKNCT True PC9_epitope_Rep5 1316.6699627010798 1316.6683049037902 22.609 3 -0.8115985859600416 0.24558991650145434 1.0 ['ENST00000491263.1_1_1:163042508-163043577:+|nuORF'] 128027 23248 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75657496793 102.52 1 -0.8116023784234723 0.24558991650145434 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 134584 25577 WVVRLGGRG True PC9_epitope_Rep3 998.5773826455797 998.57628993586 103.87 2 -0.8116515084946511 0.24559727950220678 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 100029 10180 SLKGHRKAW True H1975_Epitope_Rep1 1081.61449643029 1081.6133899358601 44.097 2 -0.8116796426551902 0.24559727950220678 1.0 ['ENSG00000103021|ENST00000219299|CCDC113', 'nc|ENSG00000103021|Q9H0I3-2|CFAP263'] 61926 20941 LLLLLPPRV True PC9_epitope_Rep4 1032.70593720364 1032.70484993586 88.709 2 -0.8116982467371799 0.24560108815187823 1.0 ['nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant'] 29716 20300 FVPGSYLEKL True PC9_epitope_Rep5 1151.6226610721499 1151.6215699358602 83.135 2 -0.8117026643201964 0.24560108815187823 1.0 ['nc|ENSG00000140368|O43586-2|PSTPIP1', 'ENSG00000140368|ENST00000558012|PSTPIP1', 'ENST00000560064.1_1_15:77328060-77329514:+|nuORF', 'ENST00000559785.5_1_15:77324735-77329514:+|nuORF'] 134079 6493 WQQQWQQQWRK True H1975_Epitope_Rep1 1628.79604260256 1628.7949499358601 30.036 2 -0.8117350511638665 0.24560108815187823 1.0 ['ENST00000253055.7_1_19:40718724-40719087:+|nuORF'] 61026 12031 LLAQQLVSP True PC9_epitope_Rep5 967.5702315764698 967.56912993586 51.271 2 -0.811756063897809 0.24560489647089465 1.0 ['ENSG00000100294|ENST00000290429|MCAT'] 133615 7689 WKCRNLSL True PC9_epitope_Rep5 1018.5382202555398 1018.53712993586 34.519 2 -0.8117591249211932 0.24560489647089465 1.0 ['ENST00000393785.6_1_3:114219230-114343790:-|nuORF'] 69278 7302 LVPELQAT True H1975_Epitope_Rep3 869.4858332461699 869.48472993586 33.063 2 -0.8117854884917134 0.24560489647089465 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 41206 7256 IADERDRVQK True H1975_Epitope_Rep1 1228.6523980606396 1228.6513099358601 32.921 2 -0.8118545677837181 0.24567038499934893 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC'] 28164 6469 FRMFYYAKDEW True H1975_Epitope_Rep1 1554.69657137174 1554.69546993586 29.945 2 -0.8118558638697728 0.24567038499934893 1.0 ['ENSG00000125245|ENST00000397470|GPR18'] 72650 9350 MWNWMVSL True PC9_epitope_Rep3 1065.47759414493 1065.4764899358602 40.903 2 -0.8118740295153709 0.24567038499934893 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 84008 17062 QENIIWSNLQY True H1975_Epitope_Rep2 1406.6830294825802 1406.6819299358601 70.89 2 -0.8118801609764696 0.24567038499934893 1.0 ['ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3', 'ENST00000498500.1_1_1:155165634-155166210:-|nuORF'] 84485 13001 QGPKVTYVP True PC9_epitope_Rep2 987.5389314481898 987.53782993586 55.295 2 -0.8119139127348153 0.24567038499934893 1.0 ['DDX4|p.I247V|1|0.34|ENSG00000152670|chr5:55785746-55785746|A/G|missense_variant'] 129768 14833 VTKMKMQRTIV True PC9_epitope_Rep5 1333.75739780649 1333.75576490379 62.057 3 -0.8119150094421926 0.24567038499934893 1.0 ['ENSG00000142534|ENST00000270625|RPS11'] 122496 9350 VGSRQRLQ True NCI_RA007_Epitope_Rep5 942.5359117564199 942.53480993586 42.606 2 -0.8119404657183799 0.2457102346711421 1.0 ['ENST00000525451.6_2_11:65623690-65625691:-|nuORF'] 136143 7683 YGGLRGAI True PC9_epitope_Rep5 805.4446371405298 805.44354993586 34.497 2 -0.8119841862267205 0.24571784040275446 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 41618 7430 IDGQGNHVP True H1975_Epitope_Rep1 935.4460936925099 935.44498993586 33.583 2 -0.8119854159707621 0.24571784040275446 1.0 ['nc|ENSG00000107485|P23771|GATA3', 'ENSG00000107485|ENST00000379328|GATA3'] 44764 12963 IPSRKREAPL True PC9_epitope_Rep4 1165.69314067381 1165.69150490379 57.756 3 -0.8120062154226902 0.24571784040275446 1.0 ['SVA_E_dup408|chr10:31969059-31970051:+|2.2329970574096665|0.275459818795955|3.02|498.0|2|1|sense'] 63604 14371 LPLPPPQLSI True NCI_RA007_Epitope_Rep5 1073.6484818971699 1073.64738993586 61.963 2 -0.8120079788641692 0.24571784040275446 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 111861 18106 TLRKYGTL True PC9_epitope_Rep3 950.5549158654999 950.55380993586 74.84 2 -0.8120151401495832 0.24571784040275446 1.0 ['ENSG00000168769|ENST00000380013|TET2'] 82708 18948 PVPLAHPLPV True PC9_epitope_Rep4 1038.6226015025 1038.62150993586 80.971 2 -0.812066576419766 0.24571784040275446 1.0 ['nc|ENSG00000215906|A8MY62|LACTBL1', 'ENSG00000215906|ENST00000426928|LACTBL1'] 79203 18757 PGFPPTPAWIL True PC9_epitope_Rep6 1194.6437308698999 1194.6420749037902 84.789 3 -0.8121618047027258 0.24575768535262207 1.0 ['ENST00000339876.10_1_1:204987617-204987836:+|nuORF'] 136310 3196 YGYERQRDYSR True NCI_RA007_Epitope_Rep1 1491.68548909407 1491.68383490379 16.323 3 -0.8121974055940634 0.2457650411561329 1.0 ['RBM38-FRMD4B|1|fusion', 'nc|ENSG00000114541|Q9Y2L6-2|FRMD4B', 'FRMD4B|p.F1023Lfs*3|1|0.27|ENSG00000114541|chr3:69171896-69171897|AA/-|frameshift_variant', 'ENSG00000114541|ENST00000398540|FRMD4B'] 31118 20823 GCFGGGCGGG True H1975_Epitope_Rep3 770.2475942100999 770.24704496793 86.985 1 -0.8122167368009948 0.2457650411561329 1.0 ['ENST00000529511.2_1_11:84256393-84256642:-|nuORF'] 99539 10049 SLEWLDLDGD True H1975_Epitope_Rep1 1161.51898384925 1161.51788993586 43.593 2 -0.8122396363948334 0.2457759518574239 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 55500 10790 LAVPTHHSL True PC9_epitope_Rep5 973.5345147740902 973.53340993586 46.494 2 -0.8122802078150232 0.24580132795208956 1.0 ['ENST00000422703.5_1_2:174136296-174136326:-|nuORF'] 15097 13778 EADKLSIW True H1975_Epitope_Rep1 960.4916469026 960.49109496793 58.14 1 -0.812321200480137 0.24582670331259945 1.0 ['nc|ENSG00000157800|Q8NCC5-3|SLC37A3', 'nc|ENSG00000157800|Q8NCC5-2|SLC37A3', 'ENSG00000157800|ENST00000326232|SLC37A3', 'ENST00000487319.1_1_7:140048309-140048561:-|nuORF', 'ENST00000477571.5_1_7:139997281-140048561:-|nuORF'] 64441 8657 LQSELASFLM True NCI_RA007_Epitope_Rep2 1137.5739966275698 1137.57288993586 38.321 2 -0.8124291592607572 0.24588480342523217 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3'] 134687 5730 WWQPREEHWRL True H1975_Epitope_Rep1 1621.7902289461297 1621.78858490379 27.109 3 -0.8124416909355658 0.24588480342523217 1.0 ['ENST00000403433.5_2_1:153606765-153609098:+|nuORF'] 43332 8622 IHGEEQQP True H1975_Epitope_Rep1 936.4301092752 936.42900993586 38.091 2 -0.8124526199890917 0.24588480342523217 1.0 ['ENSG00000181652|ENST00000639579|ATG9B', 'nc|ENSG00000181652|Q674R7-3|ATG9B'] 23513 5933 EWLQDIERHYR True H1975_Epitope_Rep1 1543.7531747310697 1543.7520699358602 27.892 2 -0.8124651505628812 0.24588480342523217 1.0 ['ENSG00000116922|ENST00000486637|C1orf109', 'ENST00000464178.1_1_1:38148756-38155336:-|nuORF'] 94178 5083 RWLNQQTRWSK True NCI_RA007_Epitope_Rep5 1501.7902289461301 1501.78801987172 26.251 4 -0.8124923902424175 0.24589571128950605 1.0 ['ENSG00000170961|ENST00000303924|HAS2', 'ENSG00000103044|ENST00000569188|HAS3'] 33262 3874 GLAMWFHFHSM True NCI_RA007_Epitope_Rep2 1362.6001688891 1362.5990699358601 19.705 2 -0.8125978324376605 0.24596447581578337 1.0 ['ENSG00000198938|ENST00000362079|MT-CO3'] 28203 22083 FRRERDFRRRR True PC9_epitope_Rep3 1648.9247057866799 1648.9236099358602 90.238 2 -0.8127102663278799 0.2459685000650825 1.0 ['ENST00000488868.1_1_1:28559432-28559522:-|nuORF'] 56661 5631 LEAAGDKF True PC9_epitope_Rep6 849.42323298961 849.42212993586 29.744 2 -0.8127245168846594 0.2459685000650825 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 56464 21289 LDTAGEKFF True PC9_epitope_Rep5 1026.5022115862998 1026.50110993586 86.942 2 -0.8127460081071008 0.2459685000650825 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant', 'PLXNA3|p.S956Lfs*51|1|0.53|ENSG00000130827|chrX:154466439-154466440|-/T|frameshift_variant'] 123625 9128 VILFMPLL True NCI_RA007_Epitope_Rep5 944.5768971800399 944.57578993586 41.761 2 -0.8127489953075373 0.2459685000650825 1.0 ['RAPGEF3|p.P813L|1|0.22|ENSG00000079337|chr12:47739166-47739166|G/A|missense_variant'] 115365 7023 TVEHIVYKALR True H1975_Epitope_Rep1 1327.7612202336297 1327.75957490379 32.049 3 -0.8127527642676207 0.2459685000650825 1.0 ['ENSG00000076242|ENST00000231790|MLH1', 'nc|ENSG00000076242|P40692-2|MLH1', 'nc|ENSG00000076242|P40692-3|MLH1'] 106502 7231 SVVNAGSL True NCI_RA007_Epitope_Rep3 745.3970182417701 745.39646496793 35.553 1 -0.812757826450699 0.2459685000650825 1.0 ['ENSG00000135917|ENST00000644224|SLC19A3'] 129475 15802 VTERQRQE True PC9_epitope_Rep3 1044.5312202988 1044.53012993586 65.937 2 -0.8127592314606455 0.2459685000650825 1.0 ['ENST00000265361.7_1_7:80374618-80378283:-|nuORF'] 21973 12640 ESLRCNVEPV True PC9_epitope_Rep2 1144.55465816532 1144.5535699358602 53.929 2 -0.8127762287767085 0.24597940529908596 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1', 'MDC1|p.V565Yfs*3|1|0.1|ENSG00000137337|chr6:30712249-30712249|C/-|frameshift_variant'] 68779 17762 LVDPLNMHV True PC9_epitope_Rep6 1036.5375515491999 1036.5364499358602 80.955 2 -0.8128547762315737 0.24601923494106587 1.0 ['nc|ENSG00000138138|Q8NBU5-2|ATAD1', 'ENSG00000138138|ENST00000680024|ATAD1'] 12235 11056 DIQPSPRRAR True H1975_Epitope_Rep1 1194.6581521474197 1194.6570499358602 47.488 2 -0.8129482323287408 0.2460446012784543 1.0 ['nc|ENSG00000289758|Q92902-4|HPS1', 'ENSG00000107521|ENST00000361490|HPS1', 'nc|ENSG00000289758|Q92902-3|HPS1'] 24576 20606 FALSGPLFL True H1975_Epitope_Rep2 963.5429541994699 963.5424049679301 85.355 1 -0.8129945792582878 0.24606996688214963 1.0 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 129005 18049 VSYLMGVSVSV True PC9_epitope_Rep2 1139.58964669171 1139.58854993586 74.73 2 -0.8131243576831906 0.24609533175218373 1.0 ['nc|ENSG00000110148|P32239-3|CCKBR', 'ENSG00000110148|ENST00000334619|CCKBR', 'nc|ENSG00000110148|P32239-2|CCKBR'] 14173 8445 DSPAVAAVVP True H1975_Epitope_Rep3 924.4916469025999 924.49109496793 37.467 1 -0.813235059674566 0.24613159797541576 1.0 ['ENST00000358729.8_1_1:110163725-110168306:+|nuORF'] 81716 4156 PSAEGKYQAFS True H1975_Epitope_Rep3 1183.55095268387 1183.54930490379 21.105 3 -0.8132351944694789 0.24613159797541576 1.0 ['OR10A4|p.H236Y|1|0.41|ENSG00000170782|chr11:6877353-6877353|C/T|missense_variant'] 103999 25398 SRRTLLPIPT True PC9_epitope_Rep5 1152.6978917010797 1152.69737496793 102.92 1 -0.8132557207248401 0.24613894030541417 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 30623 7536 GALAQHALLS True NCI_RA007_Epitope_Rep2 979.5450794577899 979.5439899358599 33.939 2 -0.8132593801905272 0.24613894030541417 1.0 ['ENST00000498209.6_1_11:2937879-2942743:+|nuORF'] 122677 12317 VGTRGTLL True PC9_epitope_Rep5 815.4865019525099 815.48540993586 52.368 2 -0.8133904391022821 0.2462076844099316 1.0 ['nc|ENSG00000183060|Q5XG99-2|LYSMD4'] 134598 15052 WWDIYYTLFEK True H1975_Epitope_Rep1 1562.7445671099797 1562.74346993586 63.148 2 -0.813457022174037 0.24621502422095293 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 76680 11274 NTLERREKHEK True NCI_RA007_Epitope_Rep2 1438.7640737679396 1438.7629699358602 48.44 2 -0.8135194594056153 0.24621502422095293 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 52569 6289 KPVDKDSYVR True NCI_RA007_Epitope_Rep4 1205.64043639461 1205.6393299358601 30.795 2 -0.813553780908139 0.24622592399791776 1.0 ['nc|ENSG00000148584|Q9NQ94-5|A1CF', 'nc|ENSG00000148584|Q9NQ94-6|A1CF', 'nc|ENSG00000148584|Q9NQ94-3|A1CF', 'ENSG00000148584|ENST00000373997|A1CF', 'nc|ENSG00000148584|Q9NQ94|A1CF', 'nc|ENSG00000148584|Q9NQ94-4|A1CF'] 1038 4218 AEAGSKKVAK True NCI_RA007_Epitope_Rep4 987.5712942056299 987.57018993586 22.536 2 -0.8135629492358809 0.24623682345966424 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR'] 111443 11628 TLKSRLSQATK True NCI_RA007_Epitope_Rep2 1231.72483472491 1231.72372993586 49.822 2 -0.8136232378545247 0.2462621822493421 1.0 ['nc|ENSG00000100092|Q9Y3L3-2|SH3BP1', 'ENSG00000100092|ENST00000649765|SH3BP1'] 64267 10527 LQLFLEQP True PC9_epitope_Rep5 986.54368247546 986.54258993586 45.48 2 -0.8136650593355044 0.24628754030567243 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7', 'ENST00000467576.1_1_6:31743192-31744939:-|nuORF'] 127531 13011 VQVHLHWWLWW True H1975_Epitope_Rep3 1588.8091734855598 1588.8080699358602 55.281 2 -0.8136755825134686 0.24629843840370155 1.0 ['ENST00000361229.8_1_X:101976007-102003782:+|nuORF'] 44250 12808 ILTFHFIHI True NCI_RA007_Epitope_Rep3 1139.64915060351 1139.6475149037901 57.623 3 -0.8136952805134546 0.24631667220912914 1.0 ['ENST00000275034.4_1_6:79646905-79647022:-|nuORF'] 131442 18522 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 78.072 2 -0.8137108641554907 0.24631667220912914 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 41625 19331 IDGVLLCGP True PC9_epitope_Rep1 885.46298962661 885.46188993586 79.162 2 -0.8137135437418836 0.24631667220912914 1.0 ['nc|ENSG00000169598|O76075-2|DFFB'] 52112 5180 KLQKWKDFQR True PC9_epitope_Rep5 1375.77245362367 1375.7707949037901 24.943 3 -0.8137308117457986 0.24632756925568214 1.0 ['ENST00000494347.5_1_10:103546197-103546269:-|nuORF'] 81712 7664 PSAASCCTMTF True PC9_epitope_Rep3 1117.42423824273 1117.42314993586 34.479 2 -0.8138129642061799 0.2463529241668474 1.0 ['ENST00000567934.5_1_16:65105947-65106067:-|nuORF'] 25156 6815 FDRAGHCE True H1975_Epitope_Rep3 933.3762998805299 933.37520993586 31.167 2 -0.8139780440177559 0.24647948413960616 1.0 ['nc|ENSG00000173264|Q96N19-3|GPR137', 'ENSG00000173264|ENST00000438980|GPR137', 'nc|ENSG00000173264|Q96N19|GPR137', 'nc|ENSG00000173264|Q96N19-4|GPR137'] 82365 17674 PTTLVDKV True PC9_epitope_Rep6 871.5014833103099 871.50038993586 80.62 2 -0.8139981553451965 0.24649037835962237 1.0 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 107499 2757 TAALNTLNRVN True H1975_Epitope_Rep2 1185.64658440421 1185.64492490379 14.633 3 -0.8141409020266851 0.24658801758038398 1.0 ['ENSG00000105877|ENST00000409508|DNAH11'] 130203 7196 VTSATAPNPV True PC9_epitope_Rep4 955.49746055903 955.49636993586 34.982 2 -0.8141822597780926 0.2466062367176996 1.0 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'ENST00000588559.5_1_19:55705613-55720813:-|nuORF', 'PTPRH|p.H592Tfs*61|1|0.13|ENSG00000080031|chr19:55197333-55197333|G/-|frameshift_variant'] 26838 12641 FLEPLMPAVL True PC9_epitope_Rep1 1128.62530392444 1128.62365490379 53.494 3 -0.8142029286754051 0.2466062367176996 1.0 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 34421 5982 GPWQHHQPWQR True PC9_epitope_Rep1 1455.6908492580299 1455.68920490379 27.824 3 -0.8142078546779558 0.2466062367176996 1.0 ['ENST00000353332.9_1_3:9729515-9730718:+|nuORF', 'ENST00000447144.5_1_3:9714379-9730718:+|nuORF'] 87642 25875 QVACTALTPT True H1975_Epitope_Rep2 1003.5008316873099 1003.5002749679301 106.25 1 -0.8143946932797519 0.246671389125815 1.0 ['ENST00000470335.1_1_22:20838156-20850080:-|nuORF'] 21721 4314 ESAASARPPP True H1975_Epitope_Rep3 981.4879585044899 981.48686993586 21.71 2 -0.814398744212456 0.246671389125815 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|20|2|sense', 'chr5:76812310-76832690|245|10.41|0.13|6.32|+|0|TE_info:SVA_D,SVA_D_dup452,SVA,Retroposon,donor,+,76811569,76812310|None,F2RL1|4'] 36935 11474 GVREMREAFTV True PC9_epitope_Rep6 1293.6499555324897 1293.64831490379 55.201 3 -0.8144339031551016 0.24670762558727863 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 78147 7552 PAPLRAAPAA True PC9_epitope_Rep1 933.5396001545298 933.53850993586 33.867 2 -0.8144801346608739 0.24670762558727863 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 9731 19086 AYKFQRKRRHK True NCI_RA007_Epitope_Rep2 1516.8851323904798 1516.88402993586 79.096 2 -0.814498781430308 0.2467185150919394 1.0 ['ENSG00000214376|ENST00000409977|VSTM5'] 61006 16319 LLALLDAGTL True PC9_epitope_Rep4 998.6011973515799 998.60010993586 70.733 2 -0.8145377490409901 0.24672940428176995 1.0 ['ENSG00000165905|ENST00000401752|LARGE2', 'ENST00000528236.5_1_11:45949456-45950393:+|nuORF', 'ENST00000530437.5_1_11:45947935-45950393:+|nuORF'] 79475 7924 PGPRPLPSP True H1975_Epitope_Rep2 916.5130510535199 916.51194993586 35.425 2 -0.8145844940504551 0.24675118171699503 1.0 ['ENST00000301765.9_1_11:60899050-60899611:-|nuORF'] 13634 10518 DPTWANLQIC True H1975_Epitope_Rep3 1159.5331944447498 1159.53208993586 45.522 2 -0.81461316572378 0.24675118171699503 1.0 ['RTL3|p.R443Pfs*62|1|0.24|ENSG00000179300|chrX:78657093-78657093|C/-|frameshift_variant'] 3654 6647 AGQSLTLECDA True H1975_Epitope_Rep3 1106.49138920242 1106.4902899358601 30.523 2 -0.8147022659980054 0.24677652500722752 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 124812 15852 VLLHESDGVL True PC9_epitope_Rep2 1080.58152453616 1080.5804299358601 66.234 2 -0.8147346772840587 0.2467838455089474 1.0 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 13102 6752 DLSEYRQIL True NCI_RA007_Epitope_Rep3 1135.5873381925899 1135.58569490379 33.65 3 -0.8147487330499846 0.2467838455089474 1.0 ['ENSG00000128833|ENST00000261839|MYO5C'] 101076 20960 SLTSRLWPR True PC9_epitope_Rep5 1114.6247267608198 1114.6236299358602 85.682 2 -0.8148481988657895 0.24682364164606913 1.0 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 100596 8365 SLQHPNVL True PC9_epitope_Rep1 906.49231560894 906.49120993586 37.011 2 -0.8150252606978674 0.24692125346901017 1.0 ['ENSG00000142235|ENST00000600059|LMTK3'] 75834 7190 NRDLATPVM-[Oxidation] True PC9_epitope_Rep3 1031.50698007735 1031.50588993586 32.668 2 -0.8150675982548278 0.24693213846932138 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 3793 7482 AGVGGWRRIGA True NCI_RA007_Epitope_Rep4 1098.60466002258 1098.6035699358602 35.425 2 -0.8152260186708389 0.24696479158235532 1.0 ['ENST00000546753.5_2_12:95867878-95867977:+|nuORF'] 84583 6765 QHDKLNLGPAI True NCI_RA007_Epitope_Rep5 1204.6564208119198 1204.6553299358602 32.698 2 -0.8152351453363917 0.24696479158235532 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 63977 12195 LQAHVLGGTL True PC9_epitope_Rep3 1007.57637958607 1007.57528993586 51.94 2 -0.8152620765756441 0.24696479158235532 1.0 ['ENSG00000173621|ENST00000309602|LRFN4'] 58574 11141 LFEHNCNT True PC9_epitope_Rep1 976.4072656556401 976.40616993586 47.738 2 -0.8152845172835212 0.24698655875126463 1.0 ['ENSG00000100418|ENST00000263256|DESI1', 'ENST00000463886.1_1_22:41998573-42000148:-|nuORF', 'ENST00000482612.1_1_22:41999261-42000085:-|nuORF'] 15695 16442 ECVWTPLPP True H1975_Epitope_Rep2 1040.5001034113197 1040.4990099358602 68.464 2 -0.8152863795199218 0.24698655875126463 1.0 ['ENST00000586860.1_1_19:44506809-44506971:-|nuORF'] 57237 15189 LEFGFDKY True H1975_Epitope_Rep2 1017.4807478657299 1017.47964993586 63.581 2 -0.8152994890507275 0.24699744186382622 1.0 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT'] 71465 17137 MKFLIPLP True H1975_Epitope_Rep2 957.5721461527698 957.57104993586 71.192 2 -0.8153885276255322 0.24703365947422426 1.0 ['chr1:103745515-103750424|173|21.9|0.0|21.06|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|43', 'chr1:103745227-103750424|306|24.34|0.0|21.21|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|43', 'chr1:103651377-103750424|112|20.44|0.0|20.96|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|43', 'chr1:103651250-103750424|129|11.88|0.0|20.18|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|43', 'chr1:103651089-103750424|267|25.88|0.0|21.3|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|43'] 66488 12314 LSRWEQEQI True PC9_epitope_Rep1 1187.5934862021898 1187.5918349037902 52.221 3 -0.8153896526427105 0.24703365947422426 1.0 ['ENSG00000159086|ENST00000331923|PAXBP1', 'ENST00000464256.1_1_21:34132086-34144033:-|nuORF', 'nc|ENSG00000159086|Q9Y5B6-3|PAXBP1', 'nc|ENSG00000159086|Q9Y5B6-4|PAXBP1', 'nc|ENSG00000159086|Q9Y5B6-2|PAXBP1'] 138349 25062 YRAVRVGLLE True NCI_RA007_Epitope_Rep1 1174.6822416369398 1174.68114993586 103.72 2 -0.8154225323341124 0.2470374010058385 1.0 ['ENST00000592103.5_1_19:38308222-38310893:+|nuORF', 'ENST00000589653.5_2_19:38308186-38310208:+|nuORF'] 22056 13091 ESRRWRPERIP True PC9_epitope_Rep3 1480.8011279829998 1480.79947490379 55.378 3 -0.8154373600149366 0.2470374010058385 1.0 ['nc|ENSG00000167302|Q96N21|TEPSIN', 'ENSG00000167302|ENST00000637944|TEPSIN', 'nc|ENSG00000167302|Q96N21-2|TEPSIN'] 134462 7681 WTQMWNRPCR True H1975_Epitope_Rep3 1376.623029592 1376.6219299358602 34.528 2 -0.8154685644326163 0.2470374010058385 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 25942 13812 FGQLRAAEMEV True NCI_RA007_Epitope_Rep1 1249.61250739461 1249.6114099358601 57.743 2 -0.8155070770977699 0.24704828243999016 1.0 ['ENST00000533685.1_1_11:64900606-64900720:-|nuORF'] 116174 22806 TVTIRRQT True PC9_epitope_Rep5 973.5668775315299 973.56578993586 92.715 2 -0.8155249729585262 0.24705559328892035 1.0 ['nc|ENSG00000147481|Q9NSN8-2|SNTG1', 'ENSG00000147481|ENST00000642720|SNTG1'] 62281 7425 LLQLPRRWEER True NCI_RA007_Epitope_Rep4 1494.8419301658203 1494.84028490379 35.205 3 -0.8155387224076708 0.24705559328892035 1.0 ['ENST00000258415.8_1_2:219646678-219646789:+|nuORF'] 112379 11792 TNDENEQVEED True H1975_Epitope_Rep3 1320.4953478522 1320.4942499358601 50.504 2 -0.8155647220893061 0.2470664739884393 1.0 ['ZSWIM2|p.H129Q|1|0.23|ENSG00000163012|chr2:186839066-186839066|A/T|missense_variant'] 62039 21133 LLLVRWKFQQE True NCI_RA007_Epitope_Rep1 1458.83471952706 1458.83362993586 86.472 2 -0.8155925922423415 0.2470666435466158 1.0 ['ENST00000360409.7_1_2:206547732-206547855:+|nuORF'] 104508 9654 SSPYDVQK True H1975_Epitope_Rep3 922.4396113297399 922.4390649679301 42.151 1 -0.8155945535918141 0.2470666435466158 1.0 ['nc|ENSG00000163701|Q8NFR9-3|IL17RE', 'ENSG00000163701|ENST00000383814|IL17RE', 'nc|ENSG00000163701|Q8NFR9-5|IL17RE', 'ENST00000489181.5_1_3:9944520-9950978:+|nuORF', 'nc|ENSG00000163701|Q8NFR9-4|IL17RE', 'ENST00000383815.7_1_3:9944714-9956386:+|nuORF', 'nc|ENSG00000163701|Q8NFR9-2|IL17RE'] 41798 15629 IDRSHLNRQGP True H1975_Epitope_Rep1 1291.6745304875499 1291.6734299358602 65.404 2 -0.8156204029517444 0.2470666435466158 1.0 ['TRPC4|p.D391H|3|0.29|ENSG00000133107|chr13:37692062-37692062|C/G|missense_variant'] 105695 5901 SVGYIFCHP True PC9_epitope_Rep2 1021.46913763621 1021.46804993586 28.093 2 -0.8156337671715325 0.2470666435466158 1.0 ['nc|ENSG00000142794|Q9H094-3|NBPF3'] 26436 13451 FILNNEGKL True PC9_epitope_Rep6 1046.5760452329 1046.57494993586 63.431 2 -0.8157258793029566 0.24707752330033958 1.0 ['ENSG00000157827|ENST00000288670|FMNL2', 'nc|ENSG00000157827|Q96PY5|FMNL2'] 85495 17458 QLIDTYASF True PC9_epitope_Rep5 1056.51277627 1056.51166993586 72.152 2 -0.8157767377571472 0.24711730196803747 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 99694 8377 SLGELGLVDLD True PC9_epitope_Rep1 1129.58666948625 1129.5855699358601 37.058 2 -0.8157908182898826 0.2471281806753652 1.0 ['ENST00000379619.5_1_2:28635552-28635666:+|nuORF'] 29950 12527 FWWWQDNWLWH True NCI_RA007_Epitope_Rep1 1702.7469671518197 1702.7458699358601 52.706 2 -0.8159244870429705 0.24716438613475125 1.0 ['ENST00000431490.1_1_3:45201441-45201549:-|nuORF'] 99734 10227 SLGIICHFC True H1975_Epitope_Rep2 991.46194408079 991.46084993586 44.343 2 -0.8159516823753178 0.24716438613475125 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2', 'ENST00000468677.5_1_13:20599458-20605462:+|nuORF'] 79408 5568 PGMAASALR True NCI_RA007_Epitope_Rep5 872.4538219252399 872.45272993586 28.102 2 -0.8159523321226698 0.24717169236104086 1.0 ['ENST00000253099.10_2_19:10365284-10368954:+|nuORF'] 115069 22342 TTSFAGSS True H1975_Epitope_Rep2 756.3289982516001 756.32790993586 92.328 2 -0.8160183667836735 0.24717169236104086 1.0 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20', 'ENST00000457750.1_1_3:195341833-195346985:+|nuORF'] 11031 20579 DDLESLLSEHT True H1975_Epitope_Rep3 1257.57247597409 1257.57136993586 86.008 2 -0.8160510607205377 0.2471754269367469 1.0 ['ENSG00000160224|ENST00000291582|AIRE', 'nc|ENSG00000160224|O43918-2|AIRE', 'nc|ENSG00000160224|O43918-4|AIRE'] 59235 14945 LGGLIIGR True PC9_epitope_Rep1 797.51232277753 797.51122993586 62.308 2 -0.8160586866435348 0.2471754269367469 1.0 ['ENST00000479950.5_1_6:41034807-41034939:-|nuORF'] 58433 8854 LEWDMEKEL True PC9_epitope_Rep3 1191.5481758025498 1191.54652490379 39.008 3 -0.8160599546130688 0.2471754269367469 1.0 ['NAALADL2-ABCC5|1|fusion', 'nc|ENSG00000177694|Q58DX5-2|NAALADL2', 'ENST00000485853.5_1_3:174577149-174974391:+|nuORF', 'ENST00000473253.5_1_3:174581768-175298945:+|nuORF', 'NAALADL2|p.I703Dfs*4|1|0.12|ENSG00000177694|chr3:175755333-175755343|CCCATCCGCAT/-|frameshift_variant', 'ENSG00000177694|ENST00000454872|NAALADL2'] 112414 8508 TNHRRRFP True H1975_Epitope_Rep3 1082.58459328434 1082.5834899358601 37.711 2 -0.8160766380275624 0.24718630354691903 1.0 ['nc|ENSG00000188687|Q9BY07-7|SLC4A5', 'nc|ENSG00000188687|Q9BY07-4|SLC4A5', 'nc|ENSG00000188687|Q9BY07-8|SLC4A5', 'ENST00000451608.2_1_2:74452054-74542150:-|nuORF', 'ENSG00000188687|ENST00000394019|SLC4A5', 'nc|ENSG00000188687|Q9BY07|SLC4A5', 'nc|ENSG00000188687|Q9BY07-2|SLC4A5', 'nc|ENSG00000188687|Q9BY07-6|SLC4A5', 'nc|ENSG00000188687|Q9BY07-5|SLC4A5'] 98386 6124 SIHYWDIRYKQ True NCI_RA007_Epitope_Rep1 1507.7571974823497 1507.75555490379 27.858 3 -0.8161149049625548 0.24719717984281092 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 95359 15836 SAHILGYLI True PC9_epitope_Rep4 985.5596668927699 985.55856993586 68.837 2 -0.8161366930414822 0.2472080558244362 1.0 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-3|IGFN1', 'nc|ENSG00000163395|Q86VF2-2|IGFN1'] 100531 8207 SLPSVRRHMI True NCI_RA007_Epitope_Rep4 1194.6655460269799 1194.6644499358601 38.354 2 -0.8161764321738242 0.24723337860094194 1.0 ['ENSG00000249709|ENST00000339282|ZNF564', 'ENST00000593682.1_1_19:12637262-12688404:-|nuORF'] 3751 14737 AGTFSQPEKVY True PC9_epitope_Rep3 1225.59790287629 1225.5968099358602 61.825 2 -0.8162110038939253 0.24724425374535894 1.0 ['ENSG00000154473|ENST00000368865|BUB3', 'nc|ENSG00000154473|O43684-2|BUB3'] 82725 16608 PVPTLWNEPAE True H1975_Epitope_Rep1 1251.6135529404298 1251.6129749679299 69.26 1 -0.816225709486805 0.24725155660854364 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 110595 7781 TISTEKPSI True PC9_epitope_Rep2 974.5284263341399 974.5273299358599 35.302 2 -0.8162468176595588 0.24725155660854364 1.0 ['ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.P2337Tfs*7|1|0.63|ENSG00000146839|chr7:100787917-100787918|-/A|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 32 6944 AAAAQEPL True NCI_RA007_Epitope_Rep4 769.39701824177 769.39646496793 33.335 1 -0.816355467156644 0.24727330511535184 1.0 ['ENSG00000090661|ENST00000251363|CERS4', 'ENST00000557925.1_1_19:8321089-8326990:+|nuORF', 'ENST00000599275.1_1_19:8326515-8326990:+|nuORF'] 82291 5737 PTPKEQKDWFI True PC9_epitope_Rep5 1387.7136013348697 1387.71196490379 27.061 3 -0.8163923060114712 0.24727330511535184 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2'] 15615 8832 EAVQEITEY True H1975_Epitope_Rep1 1080.49752012868 1080.4969749679299 38.895 1 -0.8164072683053395 0.2472841788974922 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 121145 13566 VGGGPLRKDLG True H1975_Epitope_Rep1 1067.60874234351 1067.60764993586 57.308 2 -0.8164446037237714 0.24728790789720773 1.0 ['ENSG00000213023|ENST00000600079|SYT3'] 63467 9265 LPHFISPYL True H1975_Epitope_Rep1 1085.59096702105 1085.5898699358602 40.549 2 -0.8164457726230533 0.24728790789720773 1.0 ['ENSG00000119285|ENST00000366582|HEATR1'] 9480 4088 AVYFHKYVYT True NCI_RA007_Epitope_Rep3 1289.6444591458896 1289.64280490379 22.603 3 -0.8164499245564514 0.24728790789720773 1.0 ['ENST00000451442.5_3_20:24943568-24943694:-|nuORF'] 95704 4572 SAYEPNDHSRY True H1975_Epitope_Rep3 1337.56364262589 1337.56254993586 22.707 2 -0.8164754989976917 0.2472952086553323 1.0 ['ENSG00000155367|ENST00000309276|PPM1J', 'nc|ENSG00000155367|Q5JR12-2|PPM1J'] 68096 17653 LTPDSRAVKP True H1975_Epitope_Rep2 1082.6084079903399 1082.60730993586 73.222 2 -0.8164853606550462 0.2472952086553323 1.0 ['ENST00000533627.5_1_11:118404537-118405292:+|nuORF', 'nc|ENSG00000149582|Q86YD3-3|TMEM25', 'nc|ENSG00000149582|Q86YD3-2|TMEM25', 'nc|ENSG00000149582|Q86YD3-4|TMEM25', 'ENSG00000149582|ENST00000313236|TMEM25'] 27269 9020 FLYDTHQNLR True NCI_RA007_Epitope_Rep3 1305.6465844042102 1305.64548993586 42.575 2 -0.8165789106979925 0.2473313977842296 1.0 ['ENSG00000197943|ENST00000564138|PLCG2'] 66167 12003 LSPEQTVGL True H1975_Epitope_Rep3 942.5022115862998 942.50110993586 51.329 2 -0.8166135369258671 0.2473313977842296 1.0 ['ENST00000433126.1_1_20:61294700-61296403:-|nuORF', 'ENST00000451648.1_1_20:61294700-61297915:-|nuORF', 'ENST00000411824.1_1_20:61294700-61297915:-|nuORF'] 22767 19967 EVCRRYLWK True NCI_RA007_Epitope_Rep2 1251.6546469901098 1251.6535499358602 82.667 2 -0.8166908973585819 0.24734226947076496 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'ENST00000510223.5_1_4:89394995-89425581:+|nuORF', 'ENST00000502913.1_1_4:89394186-89425581:+|nuORF'] 43857 10917 ILCWYIYLVWY True H1975_Epitope_Rep3 1533.77303078729 1533.77192993586 47.08 2 -0.8167984780423824 0.24741091675934887 1.0 ['ENST00000334955.12_1_7:77409008-77409110:+|nuORF'] 122259 23674 VGRRPRPFQE True H1975_Epitope_Rep1 1240.678887592 1240.6777899358601 98.297 2 -0.8168369606612685 0.24744352648910972 1.0 ['ENST00000554150.5_1_12:57146238-57157040:+|nuORF', 'ENST00000556650.5_3_12:57146238-57157040:+|nuORF'] 99248 9166 SLCWGRDSSTV True PC9_epitope_Rep4 1209.54482175761 1209.54372993586 42.85 2 -0.8168381957672983 0.24744352648910972 1.0 ['ENSG00000131899|ENST00000316843|LLGL1', 'ENST00000479155.1_1_17:18137242-18138852:+|nuORF'] 67769 15431 LTGVSLLPAV True PC9_epitope_Rep5 968.5906326678798 968.58952993586 64.364 2 -0.8168455810553163 0.24744352648910972 1.0 ['ENSG00000172935|ENST00000309099|MRGPRF'] 106093 9335 SVMRQRKW True NCI_RA007_Epitope_Rep5 1089.5865674302897 1089.58597496793 42.549 1 -0.8168589385155434 0.24745439577104728 1.0 ['ENST00000479713.1_1_Y:15591430-15591511:-|nuORF'] 54978 7377 LAIEYREEH True NCI_RA007_Epitope_Rep2 1158.56693710118 1158.5658499358601 33.319 2 -0.8169230016964327 0.24747970767497618 1.0 ['ENSG00000187066|ENST00000530719|TMEM262'] 63777 9532 LPSDSLVPPP True H1975_Epitope_Rep3 1020.54916177872 1020.54806993586 41.672 2 -0.8169345713783424 0.24749057612039457 1.0 ['ENST00000579186.1_1_17:30368040-30368955:+|nuORF'] 138808 9773 YSDHHRLMSC True H1975_Epitope_Rep3 1247.51756146395 1247.5164699358602 42.615 2 -0.8169699949428899 0.24750144425187753 1.0 ['ENST00000431717.6_2_3:111812256-111821694:+|nuORF'] 62401 8907 LLRRWWRPICY True H1975_Epitope_Rep2 1560.8499927517198 1560.8488899358601 39.228 2 -0.817015634796666 0.24752317957309147 1.0 ['ENST00000513185.1_1_5:98109449-98109824:+|nuORF'] 97415 14440 SGGCCGSD True NCI_RA007_Epitope_Rep5 684.1843252471999 684.18377496793 62.224 1 -0.8170190276916798 0.24752317957309147 1.0 ['ENSG00000132589|ENST00000394908|FLOT2', 'ENST00000582174.5_1_17:27210248-27224592:-|nuORF'] 61074 6382 LLAVSHVG True PC9_epitope_Rep3 794.46503823194 794.46394993586 29.573 2 -0.817082857768753 0.24753047195424874 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 139744 13021 YTYSKHGMHF True NCI_RA007_Epitope_Rep4 1269.5600778989299 1269.5589899358602 57.189 2 -0.8170901708628644 0.24753047195424874 1.0 ['ENSG00000214029|ENST00000537226|ZNF891'] 136141 7804 YGGLRGAI True PC9_epitope_Rep3 805.4446371405298 805.44354993586 35.01 2 -0.8171194291581474 0.24753418920675263 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 115110 15702 TTVVPLIS True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 67.115 2 -0.8171278185076869 0.24753418920675263 1.0 ['VEZF1|p.P489Lfs*4|1|0.46|ENSG00000136451|chr17:57974549-57974573|GGGGCGGCTAATGTCATAGGTGTGG/-|frameshift_variant', 'ENSG00000136451|ENST00000581208|VEZF1'] 23211 15227 EVQHGKPYP True PC9_epitope_Rep1 1053.5243440132099 1053.5232499358601 63.391 2 -0.8171646971784935 0.24753418920675263 1.0 ['PUDP|p.D151Y|2|0.5|ENSG00000130021|chrX:7077279-7077279|C/A|missense_variant'] 39297 11501 HLQKPYEIN True PC9_epitope_Rep2 1140.5927579262 1140.59110490379 49.562 3 -0.8171781680639917 0.24754505545286506 1.0 ['ENSG00000110367|ENST00000534980|DDX6'] 60708 6203 LIYNRGWSAEH True NCI_RA007_Epitope_Rep1 1344.6574834410799 1344.65638993586 28.163 2 -0.8172930678649406 0.2475812274368231 1.0 ['chr7:135169060-135177208|304|21.35|0.17|6.94|-|0|TE_info:HERV3-int,HERV3-int_dup109,ERV1,LTR,donor,+,135177208,135180551|CYREN,None|16'] 18965 6874 ELFLDHNDLK True NCI_RA007_Epitope_Rep2 1242.6244519773002 1242.62334993586 31.354 2 -0.8173192943690863 0.2475812274368231 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2'] 79598 4940 PGVTDAAK True NCI_RA007_Epitope_Rep5 757.39701824177 757.39592993586 25.702 2 -0.8173789876733519 0.24761739733148502 1.0 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 121798 11832 VGMVCIHWKGP True PC9_epitope_Rep3 1225.61000529681 1225.60890993586 50.531 2 -0.8173900296797989 0.24761739733148502 1.0 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 65850 10104 LSKREKENGCV True NCI_RA007_Epitope_Rep1 1261.64487015205 1261.64376993586 43.313 2 -0.817469101851409 0.24765714120687912 1.0 ['ENSG00000159055|ENST00000290130|MIS18A'] 104883 13498 STFARLQAP True PC9_epitope_Rep2 989.5294293936498 989.52832993586 57.207 2 -0.8174874452914165 0.24768244433534525 1.0 ['PHF23|p.S117A|1|0.35|ENSG00000040633|chr17:7236578-7236578|A/C|missense_variant'] 67212 10903 LTDKHQSI True PC9_epitope_Rep3 940.4977949122001 940.49668993586 46.92 2 -0.8175550586138283 0.24769330734243014 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ROCK1|p.A696T|1|0.18|ENSG00000067900|chr18:20991233-20991233|C/T|missense_variant'] 127993 16399 VRQGPGGLR True NCI_RA007_Epitope_Rep1 938.5409971368598 938.53990993586 67.901 2 -0.8176475078800943 0.24774748758230333 1.0 ['ENST00000571210.1_1_17:19287777-19288718:-|nuORF'] 33058 7097 GKDVEPQGPP True H1975_Epitope_Rep2 1022.5032742154599 1022.50216993586 32.23 2 -0.8176613970105076 0.24774761767253825 1.0 ['ENSG00000176473|ENST00000402312|WDR25'] 132266 5862 VYLAEKGEND True NCI_RA007_Epitope_Rep5 1136.5349682665599 1136.53333490379 29.233 3 -0.8176916065246691 0.24774761767253825 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2', 'nc|ENSG00000075043|O43526-6|KCNQ2'] 130390 11417 VTVMMWPL True PC9_epitope_Rep5 975.4921815799099 975.49108993586 48.915 2 -0.8176990693609248 0.24774761767253825 1.0 ['nc|ENSG00000141699|Q86VR2-2|RETREG3', 'ENSG00000141699|ENST00000309428|RETREG3'] 130653 25682 VVAVAGTIIL True PC9_epitope_Rep1 954.61136811246 954.61026993586 103.82 2 -0.8177305008543609 0.24774761767253825 1.0 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 46714 10783 ITYRETSL True PC9_epitope_Rep3 981.51311062317 981.51200993586 46.435 2 -0.8178082213412329 0.2477693396090208 1.0 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'nc|ENSG00000164308|Q6P179-2|ERAP2'] 117481 17573 VAEEHAPSIM True PC9_epitope_Rep6 1082.50664534374 1082.50554993586 80.234 2 -0.8178253701535151 0.2477693396090208 1.0 ['ENST00000423961.1_1_7:27502029-27502443:+|nuORF'] 60588 3556 LISCAKCCV True NCI_RA007_Epitope_Rep2 938.4387661080599 938.43766993586 18.481 2 -0.8178511886678963 0.24777662277662277 1.0 ['ENST00000438023.5_2_9:6982745-7014111:+|nuORF', 'nc|ENSG00000293552|Q9H3R0-3|KDM4C', 'nc|ENSG00000293552|Q9H3R0-4|KDM4C', 'nc|ENSG00000293552|Q9H3R0-2|KDM4C', 'ENSG00000107077|ENST00000381309|KDM4C'] 30903 11004 GARYYINP True PC9_epitope_Rep3 952.4766655447999 952.47556993586 47.316 2 -0.81785203350646 0.24777662277662277 1.0 ['ENST00000535357.5_1_12:19283009-19360212:+|nuORF'] 21146 18225 ERDSRESW True PC9_epitope_Rep6 1063.46828568907 1063.46718993586 82.745 2 -0.8178900630407625 0.24778390552363352 1.0 ['ENSG00000204688|ENST00000377133|OR2H1'] 1673 8064 AEGLPWDCWDL True H1975_Epitope_Rep1 1303.55432381215 1303.5532299358601 35.961 2 -0.8178996721698458 0.24778390552363352 1.0 ['ENST00000368487.7_1_1:154298166-154300613:+|nuORF'] 54997 7111 LAKAERHSRSF True NCI_RA007_Epitope_Rep1 1300.7000169594 1300.69890993586 31.651 2 -0.8179182035461321 0.24779476518399815 1.0 ['ENST00000485956.1_1_2:238428630-238446180:+|nuORF'] 19073 9409 ELHGRMISVEK True H1975_Epitope_Rep1 1297.68125566077 1297.68014993586 41.104 2 -0.8179492163657368 0.24782006121152625 1.0 ['ENSG00000130254|ENST00000252542|SAFB2'] 63853 22139 LPTTALYYL True PC9_epitope_Rep4 1053.5746482505701 1053.57354993586 93.373 2 -0.8180198273196779 0.2478309200363799 1.0 ['ENSG00000007541|ENST00000321878|PIGQ', 'nc|ENSG00000007541|Q9BRB3|PIGQ', 'ENST00000480424.6_1_16:629069-630269:+|nuORF'] 129652 14830 VTHQGLSSP True PC9_epitope_Rep2 924.46649478392 924.46538993586 62.307 2 -0.8180310094510063 0.24783820069004345 1.0 ['nc|ENSG00000211592|P01834|IGKC'] 116961 16286 TYPKIWVKV True PC9_epitope_Rep1 1132.66446631448 1132.6633699358601 67.462 2 -0.8180546227599879 0.24783820069004345 1.0 ['nc|ENSG00000243649|P00751-2|CFB', 'ENSG00000243649|ENST00000425368|CFB'] 104651 3858 [Acetylation]-SSYRESQE True NCI_RA007_Epitope_Rep4 1026.4254181338797 1026.4243299358602 21.043 2 -0.8181123317462736 0.24784548092330344 1.0 ['PTPRZ1|p.L2100Pfs*15|1|0.25|ENSG00000106278|chr7:122053952-122053953|-/T|frameshift_variant', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'PTPRZ1|p.M1456K|2|0.39|ENSG00000106278|chr7:122013413-122013413|T/A|missense_variant'] 33604 21402 GLLKISWEKPV True PC9_epitope_Rep3 1268.7492585676 1268.74816993586 87.619 2 -0.818138763002747 0.24784548092330344 1.0 ['ENSG00000116678|ENST00000349533|LEPR', 'nc|ENSG00000116678|P48357-5|LEPR', 'nc|ENSG00000116678|P48357-2|LEPR', 'nc|ENSG00000116678|P48357-4|LEPR', 'nc|ENSG00000116678|P48357-3|LEPR'] 42501 19675 IERKYSRKK True H1975_Epitope_Rep1 1206.7196897748197 1206.71858993586 81.894 2 -0.818190116475825 0.2478563385974536 1.0 ['ZNF658|p.S155I|1|0.21|ENSG00000274349|chr9:66918030-66918030|G/T|missense_variant'] 106233 10778 SVPQEETLR True NCI_RA007_Epitope_Rep2 1057.54038800017 1057.53987496793 46.525 1 -0.818210251743851 0.24786719595813786 1.0 ['ENSG00000196453|ENST00000247930|ZNF777'] 74380 8802 NITDIKTVA True H1975_Epitope_Rep3 973.54441075145 973.54330993586 38.863 2 -0.8182350301583963 0.24789630933995352 1.0 ['IARS2|p.A491V|2|0.09|ENSG00000067704|chr1:220110930-220110930|C/T|missense_variant'] 60136 7189 LHVTLTQKQEE True NCI_RA007_Epitope_Rep1 1324.6986795467199 1324.6975899358602 31.952 2 -0.8182781897285739 0.24789630933995352 1.0 ['ENST00000513468.5_1_5:54516196-54522465:-|nuORF', 'ENSG00000234602|ENST00000513312|MCIDAS'] 108989 9301 TEVIVKSIL True H1975_Epitope_Rep1 1000.6168474157199 1000.61574993586 40.684 2 -0.8182802167088311 0.24789630933995352 1.0 ['nc|ENSG00000197415|Q14D04-4|VEPH1', 'nc|ENSG00000197415|Q14D04-3|VEPH1', 'nc|ENSG00000197415|Q14D04-2|VEPH1', 'ENSG00000197415|ENST00000362010|VEPH1'] 125783 9080 VNLEKSLL True NCI_RA007_Epitope_Rep4 914.54368247546 914.54258993586 41.76 2 -0.818281967141734 0.24789630933995352 1.0 ['ENSG00000165733|ENST00000374518|BMS1'] 129750 3931 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 20.222 2 -0.8182957470255169 0.24789630933995352 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 22705 9461 ETVPEETVP True H1975_Epitope_Rep2 999.4760564081099 999.47547496793 41.359 1 -0.8183007092271957 0.24789630933995352 1.0 ['FGD5|p.G502V|1|0.41|ENSG00000154783|chr3:14820576-14820576|G/T|missense_variant'] 96495 11285 SELDQAKLE True PC9_epitope_Rep1 1031.51350454599 1031.5124099358602 48.287 2 -0.8183461156082055 0.24789630933995352 1.0 ['ENSG00000183763|ENST00000331456|TRAIP', 'ENST00000473195.5_1_3:49866538-49882012:-|nuORF'] 82916 4286 PWDLWPPP True H1975_Epitope_Rep1 1006.4912529797799 1006.49014993586 21.463 2 -0.8183495053239934 0.24789630933995352 1.0 ['ENST00000321751.9_1_1:1309740-1310526:-|nuORF', 'ENST00000338338.9_1_1:1309740-1310620:-|nuORF', 'ENST00000378853.3_1_1:1309740-1310526:-|nuORF'] 128534 13475 VSGTWHRQ True H1975_Epitope_Rep3 969.4780625271301 969.47696993586 57.105 2 -0.8184320674038362 0.24792529623161633 1.0 ['ENST00000424845.5_1_12:53564215-53567250:-|nuORF'] 62549 8818 LLTHTDIKPY True H1975_Epitope_Rep1 1199.65502382959 1199.65392993586 38.841 2 -0.8184331096606318 0.24792529623161633 1.0 ['nc|ENSG00000164920|Q8N2R0-3|OSR2', 'ENSG00000164920|ENST00000297565|OSR2'] 77485 19305 NYPPQYLILKL True PC9_epitope_Rep6 1360.77547331544 1360.77436993586 86.905 2 -0.8184515126456001 0.24792529623161633 1.0 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 80873 19206 PLVSGVFSYSN True PC9_epitope_Rep6 1168.57643915572 1168.57534993586 86.528 2 -0.8184957659135333 0.24792529623161633 1.0 ['ENST00000587817.5_1_19:37660913-37663581:-|nuORF'] 3715 8719 AGSLWLLK True H1975_Epitope_Rep3 886.5276384885 886.52654993586 38.539 2 -0.8185473743954501 0.24793615055998153 1.0 ['ENSG00000174292|ENST00000688331|TNK1', 'nc|ENSG00000174292|Q13470|TNK1'] 60110 2812 LHTVLWDGESR True NCI_RA007_Epitope_Rep1 1311.6571490879098 1311.6555149037902 14.776 3 -0.8185811193525756 0.2479578582768076 1.0 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'ENST00000502799.1_1_4:843463-843892:-|nuORF'] 42639 9235 IETPPTRNIP True PC9_epitope_Rep1 1136.6189726740402 1136.6178699358602 40.374 2 -0.818584528107187 0.2479578582768076 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'ENST00000531695.1_1_8:61769417-61773873:+|nuORF'] 124939 24235 VLLWKRTWWCH True NCI_RA007_Epitope_Rep5 1526.7968945497 1526.79578993586 100.63 2 -0.8186126639382657 0.24799757544269818 1.0 ['ENST00000463441.5_1_7:150020582-150023090:+|nuORF'] 127417 14829 VQRITTELKR True NCI_RA007_Epitope_Rep2 1242.7408191422198 1242.73918490379 62.356 3 -0.8186684566509717 0.248022859781793 1.0 ['ONECUT1|p.A298V|1|0.14|ENSG00000169856|chr15:52788992-52788992|G/A|missense_variant'] 12998 8421 DLQGERQEWKR True H1975_Epitope_Rep3 1443.72187460279 1443.72076993586 37.376 2 -0.818719109560894 0.24803371191895285 1.0 ['ENSG00000163874|ENST00000373087|ZC3H12A'] 109074 12423 TFENYYRKQRK True H1975_Epitope_Rep1 1531.7895602397896 1531.7884699358601 52.82 2 -0.8187619113253263 0.24805183560378666 1.0 ['nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6'] 41745 17504 IDPDAATCET True H1975_Epitope_Rep1 1034.42264093626 1034.42207496793 72.825 1 -0.8187971257773277 0.24805183560378666 1.0 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'ENST00000419548.4_1_20:3669209-3669317:-|nuORF'] 70574 12291 LYWVELYLMQI True H1975_Epitope_Rep1 1469.76286002641 1469.76176993586 52.302 2 -0.818821805366656 0.24805183560378666 1.0 ['ENST00000471694.1_1_3:107764569-107764836:-|nuORF'] 56650 5549 LEAAGDKF True NCI_RA007_Epitope_Rep4 849.42323298961 849.42212993586 27.942 2 -0.8188529695012785 0.2480879679067217 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 34541 17507 GQEVAIKQI True PC9_epitope_Rep4 984.5603951687599 984.55928993586 75.345 2 -0.8188551388792772 0.2480879679067217 1.0 ['ENSG00000180370|ENST00000327134|PAK2'] 83275 13519 QAEVNCGL True H1975_Epitope_Rep2 832.3749028981999 832.37435496793 57.136 1 -0.8189752189251295 0.24812051774144672 1.0 ['nc|ENSG00000137821|Q8IUZ0-4|LRRC49'] 93921 24522 RVKKGGGKK True NCI_RA007_Epitope_Rep3 956.6243328379998 956.6237849679301 106.1 1 -0.8189793347133916 0.24812051774144672 1.0 ['ENSG00000100811|ENST00000262238|YY1'] 93512 5579 RSLKNKLIMWD True PC9_epitope_Rep6 1402.7754903987798 1402.77385490379 29.505 3 -0.8189907091853661 0.24812051774144672 1.0 ['nc|ENSG00000108852|Q14168-6|MPP2', 'nc|ENSG00000108852|Q14168-2|MPP2', 'nc|ENSG00000108852|Q14168-3|MPP2', 'nc|ENSG00000108852|Q14168|MPP2', 'nc|ENSG00000108852|Q14168-4|MPP2', 'ENSG00000108852|ENST00000269095|MPP2', 'nc|ENSG00000108852|Q14168-5|MPP2'] 136692 22196 YIGLPGLFGLP True PC9_epitope_Rep3 1145.6484818971699 1145.64738993586 90.663 2 -0.8190200317520453 0.2481457966581051 1.0 ['ENSG00000196739|ENST00000356083|COL27A1'] 73576 15123 NFVGSNNLNL True PC9_epitope_Rep5 1090.54072235334 1090.5396299358601 63.177 2 -0.8190558386093244 0.24817107484524478 1.0 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 10464 9823 CMSLHGGIDQY True H1975_Epitope_Rep2 1222.51107910118 1222.5105749679299 42.768 1 -0.8190670053826394 0.24818192312132056 1.0 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000503946.1_1_5:134125872-134147057:+|nuORF'] 38020 21461 HEIILKAAQE True PC9_epitope_Rep5 1150.6346227381798 1150.63352993586 87.588 2 -0.8190738017534869 0.24818918996912245 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 82227 16668 PTIISAPAAP True PC9_epitope_Rep2 936.5280324113198 936.52692993586 69.356 2 -0.8191283129335997 0.24818918996912245 1.0 ['SUGP1|p.P365S|1|0.3|ENSG00000105705|chr19:19297139-19297139|G/A|missense_variant'] 75003 9428 NLYRCMPVP True PC9_epitope_Rep3 1091.52560696651 1091.5245099358601 41.2 2 -0.8191660412373245 0.24819666455075307 1.0 ['ENST00000450473.1_1_20:52556707-52556815:+|nuORF'] 134228 25186 WRRKALRRNPS True PC9_epitope_Rep5 1438.8381821980597 1438.8370899358601 102.02 2 -0.8192201624175681 0.24819666455075307 1.0 ['ENSG00000133980|ENST00000256362|VRTN'] 111553 6129 TLMFDKESI True PC9_epitope_Rep6 1082.53179746242 1082.5307099358602 31.996 2 -0.8192323482565224 0.24819666455075307 1.0 ['ENST00000299638.7_2_15:58007640-58007844:+|nuORF'] 27390 10933 FNDGNAAVV True PC9_epitope_Rep1 905.4242956187699 905.42374496793 46.939 1 -0.8192643048265612 0.24819666455075307 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 117367 11021 VAATTGSS True NCI_RA007_Epitope_Rep1 692.33408363204 692.3335349679301 46.864 1 -0.8193111802123011 0.24819666455075307 1.0 ['ENST00000316623.9_1_15:48937070-48937901:-|nuORF'] 103990 19279 SRRRLGRLWNR True NCI_RA007_Epitope_Rep3 1468.8599802717997 1468.8583349037901 84.181 3 -0.8193231232177148 0.24819666455075307 1.0 ['ENST00000590278.1_1_19:33696051-33698478:+|nuORF', 'ENSG00000130881|ENST00000253193|LRP3'] 133897 11530 WNELHSSGAAR True PC9_epitope_Rep1 1226.57923312038 1226.57758490379 49.23 3 -0.8193550731351922 0.24819666455075307 1.0 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000461159.6_1_7:18330122-18868840:+|nuORF', 'ENST00000490851.5_1_7:18832955-19035682:+|nuORF'] 105196 8476 STPHNILKGT True PC9_epitope_Rep1 1066.5771078620598 1066.5760099358602 37.437 2 -0.8193922795192304 0.24819666455075307 1.0 ['ENST00000557403.5_1_14:23378802-23388343:-|nuORF', 'ENST00000557549.5_1_14:23381035-23388343:-|nuORF', 'ENST00000359890.7_2_14:23380580-23388391:-|nuORF', 'ENST00000557571.5_1_14:23386286-23388343:-|nuORF', 'ENST00000557464.5_1_14:23380609-23388343:-|nuORF', 'ENST00000555676.5_1_14:23380609-23388343:-|nuORF'] 121595 16547 VGLAVFLIYKF True NCI_RA007_Epitope_Rep3 1268.7532813188798 1268.75218993586 72.879 2 -0.819406301179949 0.24819666455075307 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 63083 15555 LNLWPVPHGL True PC9_epitope_Rep5 1144.6393141958 1144.63820993586 64.842 2 -0.8194070248540177 0.24819666455075307 1.0 ['ENSG00000121879|ENST00000263967|PIK3CA', 'PIK3CA|p.E453K|1|0.1|ENSG00000121879|chr3:179210291-179210291|G/A|missense_variant'] 34400 12067 GPVDRVETTR True NCI_RA007_Epitope_Rep4 1128.58873517492 1128.5870849037901 53.415 3 -0.8194299388624334 0.24820761385438755 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 125076 24726 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 106.93 3 -0.8194323482353715 0.24820761385438755 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 72160 20666 MRKWPRQYEWF True H1975_Epitope_Rep3 1625.79253744525 1625.79144993586 86.355 2 -0.8194325111681833 0.24820761385438755 1.0 ['ENSG00000175874|ENST00000324768|CREG2', 'TLK1-CREG2|2|fusion', 'TLK1-CREG2|1|fusion', 'TLK1-CREG2|3|fusion'] 6196 5252 APQRLPQT True PC9_epitope_Rep1 909.5032146458099 909.50210993586 25.048 2 -0.8194347138273241 0.24820761385438755 1.0 ['nc|ENSG00000120341|Q96JE7-2|SEC16B', 'ENSG00000120341|ENST00000308284|SEC16B', 'ENST00000464428.2_1_1:177930716-177937161:-|nuORF', 'ENST00000466953.6_1_1:177929778-177937161:-|nuORF'] 36783 15593 GVPGELSLQV True H1975_Epitope_Rep1 997.5444107514498 997.54330993586 65.262 2 -0.8194418149704301 0.24820761385438755 1.0 ['ENST00000485800.6_1_10:102248942-102249915:-|nuORF'] 60997 5364 LLALHSAA True NCI_RA007_Epitope_Rep1 794.4650382319401 794.46394993586 24.943 2 -0.81946410995653 0.24821845878653243 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 111797 13628 TLRALRLV True PC9_epitope_Rep1 940.6181848283999 940.61708993586 57.276 2 -0.8195081299960346 0.24822930340579605 1.0 ['ENSG00000188782|ENST00000456354|CATSPER4', 'nc|ENSG00000188782|Q7RTX7-2|CATSPER4'] 137458 10468 YLNYPTQVIFK True H1975_Epitope_Rep1 1384.7390878067197 1384.73798993586 45.22 2 -0.8195413422829779 0.24824014771219202 1.0 ['nc|ENSG00000124786|Q9H1N7-3|SLC35B3', 'ENSG00000124786|ENST00000644923|SLC35B3'] 108754 7531 TENSYYLVME True H1975_Epitope_Rep2 1247.53800504167 1247.53636490379 33.919 3 -0.8196214152873939 0.24827297768932347 1.0 ['ENSG00000142149|ENST00000270112|HUNK'] 69950 22365 LYEEEFWL True PC9_epitope_Rep3 1127.51752729727 1127.51642993586 91.307 2 -0.819650138174975 0.24827297768932347 1.0 ['ENST00000335281.8_1_14:52434561-52434765:+|nuORF'] 19601 16484 ELRKLPVP True PC9_epitope_Rep1 950.5913013742198 950.59020993586 68.231 2 -0.8196808807007067 0.24827297768932347 1.0 ['ENSG00000117408|ENST00000372343|IPO13'] 31172 3707 GDEWKVEDLSR True NCI_RA007_Epitope_Rep2 1332.6309939097198 1332.62935490379 19.065 3 -0.8197136727561856 0.24827297768932347 1.0 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44', 'ENSG00000132879|ENST00000251547|FBXO44'] 123736 22188 VIREPITV True PC9_epitope_Rep1 925.5596668927699 925.55856993586 90.166 2 -0.8197697615291886 0.24827297768932347 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 83858 6441 QEGSEYWDRET True NCI_RA007_Epitope_Rep1 1398.56878757598 1398.56768993586 29.075 2 -0.8198037072993805 0.24827297768932347 1.0 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 90216 19780 RHKRRRRKH True NCI_RA007_Epitope_Rep5 1328.8238695465998 1328.8227699358602 82.995 2 -0.8198268146175163 0.24827297768932347 1.0 ['DVL3|p.Q224H|1|0.1|ENSG00000161202|chr3:184165185-184165185|G/C|missense_variant'] 60948 15195 LLADARTVL True PC9_epitope_Rep2 970.5811306133401 970.58002993586 63.707 2 -0.81985747120621 0.24827297768932347 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF'] 15524 9495 EARQQEKHFEV True PC9_epitope_Rep5 1399.6844264649098 1399.6827749037902 41.479 3 -0.8199080432730228 0.24827297768932347 1.0 ['nc|ENSG00000186185|Q86Y91-6|KIF18B', 'ENSG00000186185|ENST00000593135|KIF18B'] 90215 19675 RHKRRRRKH True NCI_RA007_Epitope_Rep5 1328.8238695465998 1328.8227699358602 82.593 2 -0.8199109481370249 0.24827297768932347 1.0 ['DVL3|p.Q224H|1|0.1|ENSG00000161202|chr3:184165185-184165185|G/C|missense_variant'] 133859 21388 WMAWCVAA True NCI_RA007_Epitope_Rep5 936.3986155482398 936.39750993586 89.33 2 -0.8199390229364895 0.24827297768932347 1.0 ['ENSG00000186191|ENST00000375483|BPIFB4', 'BPIFB4|p.G207Vfs*26|1|0.17|ENSG00000186191|chr20:33083813-33083813|G/-|frameshift_variant'] 61551 18576 LLGHKTVF True PC9_epitope_Rep3 913.53853752537 913.53744993586 76.679 2 -0.8199615432053925 0.24827297768932347 1.0 ['SORL1|p.M2063Vfs*2|1|0.15|ENSG00000137642|chr11:121625100-121625101|AT/-|frameshift_variant', 'ENSG00000137642|ENST00000260197|SORL1', 'ENST00000532451.1_1_11:121323091-121416136:+|nuORF', 'SORL1|p.G687Vfs*4|1|0.3|ENSG00000137642|chr11:121549967-121549967|G/-|frameshift_variant'] 18972 6881 ELFPSPDP True H1975_Epitope_Rep3 900.4228986364399 900.42180993586 31.426 2 -0.8199650272595668 0.24827297768932347 1.0 ['ENSG00000175220|ENST00000311956|ARHGAP1', 'ENST00000526423.1_1_11:46700589-46702208:-|nuORF'] 90646 23391 RKKQHRHFLVP True PC9_epitope_Rep1 1444.85276963304 1444.8516699358602 94.756 2 -0.819971148342561 0.24827297768932347 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 15364 9607 EALIRFIEDGR True H1975_Epitope_Rep3 1317.70409928033 1317.70300993586 41.968 2 -0.819972112295267 0.24827297768932347 1.0 ['RO60|p.L64F|1|0.16|ENSG00000116747|chr1:193069246-193069246|G/T|missense_variant'] 11191 13813 DEKEYPHRR True PC9_epitope_Rep5 1228.5948831845199 1228.59378993586 58.15 2 -0.8200739102591379 0.2483090812073665 1.0 ['ENSG00000070501|ENST00000265421|POLB'] 42253 8858 IEHMQMDKP True PC9_epitope_Rep2 1127.51035082519 1127.50924993586 39.424 2 -0.8200966950351198 0.2483090812073665 1.0 ['ENST00000531569.1_1_11:35936821-35939650:-|nuORF'] 98143 5958 SICVMLICSLM True PC9_epitope_Rep4 1211.57863070915 1211.5769849037902 29.853 3 -0.8202142130945819 0.248319921548268 1.0 ['KCNH7|p.G651C|1|0.34|ENSG00000184611|chr2:162435201-162435201|C/A|missense_variant'] 43114 16216 IGMTRIPVI True PC9_epitope_Rep2 998.5946725024999 998.59356993586 67.622 2 -0.82025701797618 0.24833076157651096 1.0 ['nc|ENSG00000140538|Q16288-2|NTRK3', 'NTRK3|p.E798Rfs*18|1|0.11|ENSG00000140538|chr15:87877067-87877067|G/-|frameshift_variant', 'nc|ENSG00000140538|Q16288-5|NTRK3', 'nc|ENSG00000140538|Q16288-3|NTRK3', 'nc|ENSG00000140538|Q16288-4|NTRK3', 'ENSG00000140538|ENST00000629765|NTRK3'] 99808 9904 SLGSMGFL True PC9_epitope_Rep2 810.3945757136199 810.39346993586 43.426 2 -0.8203272268150781 0.24839928472542686 1.0 ['ENSG00000166507|ENST00000309979|NDST2', 'nc|ENSG00000166507|P52849-2|NDST2'] 81243 13336 PPPFFAVC True NCI_RA007_Epitope_Rep4 876.4203965386398 876.41928993586 58.449 2 -0.8203769482735539 0.248424543946932 1.0 ['ENST00000216181.9_1_22:36678235-36678298:-|nuORF'] 91727 24297 RPIQLKIQDEK True PC9_epitope_Rep5 1366.7932486378998 1366.79161490379 98.481 3 -0.820385349681588 0.2484317995010599 1.0 ['nc|ENSG00000169435|Q6ZTQ3-4|RASSF6', 'nc|ENSG00000169435|Q6ZTQ3-3|RASSF6', 'ENSG00000169435|ENST00000307439|RASSF6', 'nc|ENSG00000169435|Q6ZTQ3|RASSF6'] 98462 14498 SIKLMKDI True PC9_epitope_Rep2 946.55213898418 946.55104993586 61.035 2 -0.8204382072734315 0.2484317995010599 1.0 ['ENSG00000102595|ENST00000376747|UGGT2', 'ENST00000467305.1_1_13:96637506-96665674:-|nuORF', 'ENST00000465196.5_1_13:96635825-96665653:-|nuORF'] 69709 20139 LVYYINIFR True PC9_epitope_Rep1 1199.6702799709099 1199.66863490379 82.296 3 -0.8205072690160405 0.24845347445529134 1.0 ['ENST00000504959.5_1_4:186260544-186290945:+|nuORF', 'nc|ENSG00000109762|Q9H3E2-2|SNX25', 'nc|ENSG00000109762|Q9H3E2|SNX25', 'ENSG00000109762|ENST00000652585|SNX25'] 120484 26173 VFVNLPRSR True PC9_epitope_Rep1 1086.62981214126 1086.6287099358601 106.0 2 -0.8205467843272674 0.24845347445529134 1.0 ['ENST00000416904.4_1_12:53574496-53575518:+|nuORF'] 35781 9097 GTVPVSVAVT True PC9_epitope_Rep3 928.52294703088 928.52184993586 39.931 2 -0.8205911601452556 0.248478731074261 1.0 ['ENST00000399215.5_1_21:37431931-37432327:-|nuORF'] 25243 11346 FEDENFHY True H1975_Epitope_Rep2 1099.42468954159 1099.42358993586 48.691 2 -0.8206286226407046 0.2484968206133837 1.0 ['ENSG00000171497|ENST00000307720|PPID'] 135440 5964 YDYFQIKMQNY True H1975_Epitope_Rep1 1511.67550157399 1511.67440993586 28.011 2 -0.8206420045753801 0.2484968206133837 1.0 ['ENSG00000205413|ENST00000379958|SAMD9'] 23257 14564 EVRLAVREAI True PC9_epitope_Rep5 1154.6771562565 1154.67550490379 61.019 3 -0.8206485775474744 0.2484968206133837 1.0 ['ENSG00000100726|ENST00000262319|TELO2'] 35336 10842 GSVVRRIRLP True H1975_Epitope_Rep1 1151.7251095084298 1151.72400993586 46.665 2 -0.8207154833440944 0.24855091270871182 1.0 ['SEL1L|p.Q338R|1|0.29|ENSG00000071537|chr14:81498007-81498007|T/C|missense_variant'] 139474 17881 YTGEGQWEV True PC9_epitope_Rep1 1067.45598966987 1067.4554749679298 73.572 1 -0.8207663008298907 0.2485617475308197 1.0 ['ENST00000397105.7_1_3:10353516-10362775:-|nuORF', 'ENST00000477547.6_1_3:10345637-10359739:-|nuORF', 'nc|ENSG00000157020|P55735-2|SEC13', 'ENSG00000157020|ENST00000350697|SEC13', 'nc|ENSG00000157020|P55735-4|SEC13', 'nc|ENSG00000157020|P55735-3|SEC13', 'ENST00000482647.5_1_3:10353516-10354476:-|nuORF', 'ENST00000479868.6_1_3:10342947-10354476:-|nuORF'] 129592 9496 VTGNVEGQWFL True NCI_RA007_Epitope_Rep1 1248.6138872935996 1248.61278993586 40.932 2 -0.8208257805196062 0.24857624821580473 1.0 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000529199.1_1_11:66333209-66333615:-|nuORF', 'ENST00000527141.5_1_11:66331945-66334941:-|nuORF'] 112026 8897 TLSTQFKQAP True H1975_Epitope_Rep3 1119.59242357303 1119.5913299358601 39.219 2 -0.8208387764455745 0.24857624821580473 1.0 ['nc|ENSG00000132382|Q9BQG0-2|MYBBP1A', 'ENSG00000132382|ENST00000254718|MYBBP1A', 'ENST00000573175.1_1_17:4451225-4453465:-|nuORF'] 69022 18532 LVHNGWDDL True PC9_epitope_Rep4 1067.50360856863 1067.5025099358602 79.358 2 -0.8208962384958964 0.24857624821580473 1.0 ['nc|ENSG00000165458|O15357-2|INPPL1', 'ENSG00000165458|ENST00000298229|INPPL1', 'INPPL1|p.S980Nfs*4|2|0.11|ENSG00000165458|chr11:72237183-72237183|G/AT|frameshift_variant'] 80955 8357 PNDTRKLYL True H1975_Epitope_Rep1 1118.6084079903399 1118.60730993586 37.075 2 -0.8209655184530499 0.24857624821580473 1.0 ['ENSG00000204913|ENST00000377924|LRRC3C'] 76678 10857 NTLERREKHEK True H1975_Epitope_Rep3 1438.7640737679396 1438.7629699358602 46.843 2 -0.820992593144483 0.24858349793111403 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 117361 7930 VAASTGIDLL True PC9_epitope_Rep4 958.53351171458 958.53240993586 37.935 2 -0.8210259109382798 0.24858349793111403 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 115377 15120 TVEMCYPPI True PC9_epitope_Rep1 1051.4718400581498 1051.47074993586 62.978 2 -0.8211464351205402 0.24864857072840235 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.T612Dfs*15|1|0.34|ENSG00000092201|chr14:21361174-21361175|-/T|frameshift_variant', 'ENST00000537175.1_1_12:16554488-16554707:-|nuORF'] 55199 16595 LAPLATAPG True PC9_epitope_Rep5 809.4647038787699 809.46360993586 68.838 2 -0.8211554929655275 0.24864857072840235 1.0 ['ENSG00000135537|ENST00000368977|AFG1L', 'ENST00000430458.1_1_6:108616211-108666050:+|nuORF'] 111751 14088 TLQKEGVI True PC9_epitope_Rep2 886.5123823471798 886.51128993586 59.463 2 -0.8211643860166246 0.24864857072840235 1.0 ['nc|ENSG00000100242|Q9UH99-3|SUN2', 'ENSG00000100242|ENST00000689035|SUN2', 'nc|ENSG00000100242|Q9UH99-2|SUN2'] 115118 6623 TTYDYKADEKW True NCI_RA007_Epitope_Rep1 1418.6354105838195 1418.63430993586 29.775 2 -0.8211679700052468 0.24864857072840235 1.0 ['ENSG00000071537|ENST00000336735|SEL1L', 'nc|ENSG00000071537|Q9UBV2-2|SEL1L', 'ENST00000554744.1_1_14:81964730-81972475:-|nuORF'] 13490 11765 DPEEEEPVYI True PC9_epitope_Rep4 1218.5292141797797 1218.5281099358601 53.02 2 -0.821199680468299 0.24864857072840235 1.0 ['ENSG00000144460|ENST00000272907|NYAP2', 'nc|ENSG00000144460|Q9P242|NYAP2', 'NYAP2|p.K316Rfs*57|2|0.13|ENSG00000144460|chr2:225582356-225582356|C/-|frameshift_variant'] 19640 5443 ELRRRDTFYKE True H1975_Epitope_Rep1 1511.78447485935 1511.78281490379 25.995 3 -0.8212359059210748 0.24864857072840235 1.0 ['ENST00000514908.5_1_3:126423131-126653948:+|nuORF', 'ENSG00000159685|ENST00000290913|CHCHD6', 'ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 15514 4896 EAREHSKLR True NCI_RA007_Epitope_Rep2 1124.6050539453997 1124.60341490379 23.666 3 -0.8212382633279365 0.24864857072840235 1.0 ['CDH9|p.D685H|1|0.06|ENSG00000113100|chr5:26881453-26881453|C/G|missense_variant'] 23554 8730 EYAGSKGRF True PC9_epitope_Rep5 1013.4930438849299 1013.49194993586 38.521 2 -0.8212388821809538 0.24864857072840235 1.0 ['ENSG00000163312|ENST00000295488|HELQ'] 57400 10554 LEHTWRQLRRS True PC9_epitope_Rep4 1480.8011279829998 1480.79947490379 48.326 3 -0.8212426198109591 0.24864857072840235 1.0 ['ENSG00000125731|ENST00000245908|SH2D3A', 'nc|ENSG00000125731|Q9BRG2-2|SH2D3A'] 56714 16066 LEAEVRQLTL True PC9_epitope_Rep5 1170.6608374860198 1170.6597499358602 66.786 2 -0.8212480502804816 0.24864857072840235 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B'] 83276 13405 QAEVNCGL True H1975_Epitope_Rep3 832.3749028981999 832.37435496793 56.83 1 -0.8212724563510171 0.24866306306306307 1.0 ['nc|ENSG00000137821|Q8IUZ0-4|LRRC49'] 21492 10981 ERQRIVQQYHP True PC9_epitope_Rep1 1452.7585944646798 1452.75694490379 47.128 3 -0.821286030384404 0.24866306306306307 1.0 ['ENST00000510527.5_1_4:113153247-113186224:+|nuORF', 'ENSG00000138660|ENST00000274000|AP1AR', 'nc|ENSG00000138660|Q63HQ0-2|AP1AR'] 41872 9707 IDTYSQSYLFN True H1975_Epitope_Rep1 1349.6139468632498 1349.6128499358601 42.265 2 -0.8213137267483858 0.24866306306306307 1.0 ['ENST00000604908.1_1_6:46626610-46636458:+|nuORF'] 59092 6852 LGEDLVQPP True H1975_Epitope_Rep3 966.5022115862998 966.50110993586 31.314 2 -0.8213371920439616 0.24866306306306307 1.0 ['ENSG00000175463|ENST00000542590|TBC1D10C', 'ENST00000530967.6_1_11:67171601-67174164:+|nuORF', 'nc|ENSG00000175463|Q8IV04-2|TBC1D10C'] 12151 14914 DIKELIPEFYY True PC9_epitope_Rep6 1428.7176836557999 1428.7160249037902 69.361 3 -0.8213874262503374 0.24867404588954226 1.0 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'ENST00000503716.5_1_4:151186876-151502511:-|nuORF', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 114621 8888 TSNFDKEFTR True NCI_RA007_Epitope_Rep5 1243.5833154413099 1243.5822099358602 40.85 2 -0.8213976990167693 0.24867404588954226 1.0 ['ADCY9-PRKCB|2|fusion', 'nc|ENSG00000166501|P05771|PRKCB', 'ENST00000303531.11_2_16:24231131-24231431:+|nuORF'] 111777 9351 TLQRIYSL True PC9_epitope_Rep1 992.5654805492 992.56438993586 40.826 2 -0.8214302140330403 0.24867404588954226 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 65827 20913 LSKIKSWANK True PC9_epitope_Rep3 1173.68699266421 1173.6858899358601 85.719 2 -0.8214400699753434 0.24867404588954226 1.0 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 96614 4526 SEMNRIYTLFL True H1975_Epitope_Rep3 1385.70132239901 1385.69968490379 22.53 3 -0.8214479230057905 0.24867404588954226 1.0 ['WHSC1L1-DDHD2|1|fusion', 'ENSG00000085788|ENST00000397166|DDHD2', 'ENST00000531344.1_1_8:38099790-38103488:+|nuORF'] 120098 14846 VFHRERLEESA True NCI_RA007_Epitope_Rep4 1371.6895118453501 1371.6884099358601 64.568 2 -0.8214486326994285 0.24867404588954226 1.0 ['ENST00000320033.4_1_17:41476390-41477029:+|nuORF'] 72649 6714 MWNWMVSL True PC9_epitope_Rep3 1065.47759414493 1065.4764899358602 30.847 2 -0.8214622656295129 0.24867404588954226 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 26549 9685 FIVLCLCPK True NCI_RA007_Epitope_Rep1 1034.56568087334 1034.56458993586 41.673 2 -0.8214982403290317 0.24867404588954226 1.0 ['ENST00000563356.5_1_16:75182509-75191064:+|nuORF'] 30881 9096 GARPGPGVWDP True NCI_RA007_Epitope_Rep4 1107.5461420869499 1107.54504993586 41.823 2 -0.8215244301014439 0.24867404588954226 1.0 ['nc|ENSG00000247077|Q96HS1-2|PGAM5', 'ENSG00000247077|ENST00000498926|PGAM5'] 99264 5550 SLDDIQQAINR True PC9_epitope_Rep5 1271.64697832703 1271.64532490379 26.353 3 -0.821585999685754 0.24868129017381027 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8', 'DNAH8|p.N1473Ifs*15|1|0.19|ENSG00000124721|chr6:38848664-38848664|A/-|frameshift_variant', 'DNAH8|p.S2130Vfs*12|1|0.21|ENSG00000124721|chr6:38872578-38872578|G/-|frameshift_variant'] 131673 25515 VWLLRDAIKRR True PC9_epitope_Rep4 1424.8728363712798 1424.87172993586 107.18 2 -0.8216098521880021 0.24868129017381027 1.0 ['GCK|p.G183W|1|0.3|ENSG00000106633|chr7:44150001-44150001|C/A|missense_variant'] 129752 4402 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 22.035 2 -0.8216813893974496 0.24869211812010894 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 36802 2903 GVPPPAFEWYK True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 14.772 3 -0.8216983096410864 0.2487029457543091 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 28218 11701 FRRHIRQHS True PC9_epitope_Rep1 1235.67480527107 1235.6731649037902 49.883 3 -0.8217393084236856 0.24871377307642423 1.0 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 131686 20488 VWNPFLDVI True PC9_epitope_Rep4 1101.58588164061 1101.58478993586 86.956 2 -0.8217637992327688 0.24872101569367785 1.0 ['nc|ENSG00000136827|O14656-2|TOR1A', 'ENST00000473084.1_1_9:132584712-132586364:-|nuORF'] 94312 26989 RWTHLLRLLRH True H1975_Epitope_Rep3 1499.89496879819 1499.89333490379 112.97 3 -0.8217762766217291 0.24872101569367785 1.0 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 30278 8714 GAALSAAAVP True PC9_epitope_Rep1 826.45486747106 826.45376993586 38.356 2 -0.8217823837809184 0.24873184228729536 1.0 ['NKX2-2|p.D124Vfs*186|1|0.35|ENSG00000125820|chr20:21512374-21512375|-/A|frameshift_variant'] 122684 12102 VGTSKVLVL True NCI_RA007_Epitope_Rep3 914.5800679841799 914.57896993586 54.721 2 -0.821818184427239 0.24874266856887584 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 64954 17347 LSCMSRWV True PC9_epitope_Rep2 980.45719305352 980.45608993586 71.978 2 -0.821835825524 0.2487534945384327 1.0 ['ENST00000598660.1_1_19:18723732-18729158:+|nuORF'] 59863 15358 LHGLASLL True PC9_epitope_Rep3 822.4963383602201 822.49524993586 64.231 2 -0.8218603310939856 0.24877514554152977 1.0 ['ENSG00000183134|ENST00000332539|PTGDR2'] 20786 13542 EQMERIRRHQQ True NCI_RA007_Epitope_Rep1 1509.75827719485 1509.75716993586 56.683 2 -0.8218664788021565 0.24877514554152977 1.0 ['ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5'] 82451 17824 PVDLPLLFHRE True PC9_epitope_Rep6 1334.7346711326197 1334.73301490379 81.191 3 -0.8218731667314524 0.2487859705750969 1.0 ['ENST00000358731.8_2_5:70754407-70754644:+|nuORF'] 134027 6986 WPWRWREWRPW True H1975_Epitope_Rep1 1739.8585832894696 1739.85694490379 31.909 3 -0.8219011033916634 0.24878604054696618 1.0 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF'] 64448 13649 LQSLQSELQFK True NCI_RA007_Epitope_Rep2 1319.7085159544297 1319.7074099358601 57.733 2 -0.8219202538764082 0.24878604054696618 1.0 ['nc|ENSG00000164053|Q8WXE1-5|ATRIP', 'nc|ENSG00000164053|Q8WXE1-3|ATRIP', 'nc|ENSG00000164053|Q8WXE1-2|ATRIP', 'ENSG00000164053|ENST00000320211|ATRIP'] 65504 8138 LSFRWRENRCY True NCI_RA007_Epitope_Rep2 1528.7357508451198 1528.73464993586 36.288 2 -0.8219471742514752 0.24878604054696618 1.0 ['ENST00000563604.1_1_15:43017281-43017455:-|nuORF'] 48946 5855 KEYESYSDF True NCI_RA007_Epitope_Rep2 1166.4767846840998 1166.4756899358601 27.394 2 -0.8219594884296866 0.24878604054696618 1.0 ['ENSG00000021852|ENST00000371237|C8B'] 72994 7420 NDAKQPGR True NCI_RA007_Epitope_Rep1 884.4464280456798 884.44532993586 32.858 2 -0.8220211040251795 0.24882568225699547 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 36201 18536 GVFTKRQRK True NCI_RA007_Epitope_Rep4 1118.6672602791398 1118.66667496793 80.21 1 -0.8220629908020661 0.24885091422560984 1.0 ['ENSG00000121053|ENST00000225371|EPX'] 57257 7399 LEFWASSVEEE True H1975_Epitope_Rep1 1324.5823123818002 1324.5812099358602 33.465 2 -0.8221480791367883 0.24890137598155754 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 98113 16730 SIAIEKEKL True PC9_epitope_Rep1 1029.6070110080097 1029.6059099358602 69.179 2 -0.8221522044622276 0.24890137598155754 1.0 ['nc|ENSG00000079156|Q9BZF3-6|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6'] 122685 16444 VGTSLETF True PC9_epitope_Rep3 852.4228986364401 852.42180993586 68.389 2 -0.8221870137461448 0.24891219779269805 1.0 ['ABCC10|p.D1264Efs*2|1|0.28|ENSG00000124574|chr6:43447766-43447769|TGGA/-|frameshift_variant', 'nc|ENSG00000124574|Q5T3U5-2|ABCC10', 'ENSG00000124574|ENST00000372530|ABCC10', 'ENST00000463024.1_1_6:43403548-43405752:+|nuORF'] 59617 16605 LGSGQGLF True PC9_epitope_Rep5 777.40210362221 777.40100993586 68.877 2 -0.8222085650259081 0.2489158466481292 1.0 ['ENST00000374608.3_1_1:23694548-23694674:-|nuORF'] 41425 12965 IATGGIIDPV True PC9_epitope_Rep4 954.5385970950199 954.53750993586 57.763 2 -0.8222152455184674 0.2489158466481292 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant', 'ENSG00000261150|ENST00000615648|EPPK1'] 140944 8813 YYYYHYCYAWL True PC9_epitope_Rep2 1606.65912323386 1606.6574849037902 39.252 3 -0.8222798678649218 0.2489158466481292 1.0 ['ENST00000360409.7_1_2:206547248-206547725:+|nuORF'] 129753 4495 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 22.384 2 -0.8223331208854832 0.24895189523274408 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 44737 8387 IPRDQSPSL True PC9_epitope_Rep2 1011.53490869691 1011.53380993586 37.632 2 -0.8223518403989416 0.24895189523274408 1.0 ['ENST00000595750.1_3_19:42811211-42813854:+|nuORF', 'ENST00000499536.2_1_19:42813698-42813854:+|nuORF'] 55866 14883 LDFLIIDKHE True NCI_RA007_Epitope_Rep2 1241.6655885132898 1241.66448993586 62.567 2 -0.8223607070926314 0.24896271538062584 1.0 ['ENST00000397042.7_1_20:37204556-37204643:+|nuORF'] 84039 7518 QEPPLRLQ True NCI_RA007_Epitope_Rep1 979.5450794577898 979.5439899358599 33.237 2 -0.8225411046975296 0.2490600285232724 1.0 ['ENST00000376499.7_2_9:84303366-84303945:-|nuORF'] 123879 25437 VKDRKKKK True NCI_RA007_Epitope_Rep3 1028.6818477141198 1028.68127496793 109.96 1 -0.822567969601719 0.2490600285232724 1.0 ['ENSG00000124228|ENST00000618172|DDX27', 'nc|ENSG00000124228|Q96GQ7|DDX27', 'ENST00000484427.5_1_20:47835892-47850293:+|nuORF'] 34579 13963 GQGDERDMQL True PC9_epitope_Rep5 1147.49278618475 1147.4916899358602 58.731 2 -0.8225683494805391 0.2490600285232724 1.0 ['ENSG00000092148|ENST00000399332|HECTD1', 'ENST00000556474.1_1_14:31672823-31675142:-|nuORF', 'HECTD1|p.L328Ffs*29|1|0.3|ENSG00000092148|chr14:31173328-31173329|-/AA|frameshift_variant'] 123262 14802 VHPRVGRRRRS True H1975_Epitope_Rep3 1374.8181154598199 1374.8164649037901 62.314 3 -0.8225761426230157 0.2490600285232724 1.0 ['ENST00000597790.5_1_19:50879837-50880852:+|nuORF'] 11013 1752 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 9.5304 2 -0.8225786863047575 0.2490600285232724 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 46853 10417 IVGAPEPR True H1975_Epitope_Rep1 837.4708518883699 837.47030496793 45.02 1 -0.8226333455417861 0.24906367041198502 1.0 ['NACC1|p.K42Sfs*115|1|0.3|ENSG00000160877|chr19:13135332-13135333|AG/-|frameshift_variant'] 58862 8669 LFSEVILFQLW True NCI_RA007_Epitope_Rep2 1393.7645742785699 1393.76293490379 38.368 3 -0.8226673857224605 0.24906367041198502 1.0 ['ENST00000497194.6_1_11:71713256-71713580:+|nuORF'] 138274 23516 YQVTYQLKIPC True PC9_epitope_Rep2 1354.6955087425797 1354.69387490379 95.927 3 -0.8227293393338492 0.24906367041198502 1.0 ['ENST00000506888.5_1_6:88187111-88216600:+|nuORF', 'nc|ENSG00000164414|P78382-2|SLC35A1', 'ENSG00000164414|ENST00000369552|SLC35A1'] 39537 17247 HPFGFVAV True PC9_epitope_Rep4 872.4544735482399 872.4539249679301 74.349 1 -0.8228076188738788 0.24911770213624118 1.0 ['ENST00000473256.6_1_16:1359737-1365732:+|nuORF', 'ENSG00000103275|ENST00000397514|UBE2I', 'ENST00000562482.1_1_16:1364025-1364539:+|nuORF'] 137885 13304 YPNFMNHEKFW True H1975_Epitope_Rep1 1511.6656055966296 1511.66450993586 56.279 2 -0.8228563537739861 0.24912851833712657 1.0 ['ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF'] 64428 5797 LQRSETEP True H1975_Epitope_Rep2 958.4719740871799 958.47086993586 27.287 2 -0.8229168481762329 0.24913574556349388 1.0 ['ENSG00000130962|ENST00000378628|PRRG1'] 126373 7579 VPLDLVQPP True H1975_Epitope_Rep3 976.5593325395998 976.55822993586 34.133 2 -0.8229539866423525 0.24913574556349388 1.0 ['nc|ENSG00000091129|Q92823-4|NRCAM'] 140509 9506 YYIRGATTTF True NCI_RA007_Epitope_Rep3 1191.5924235730297 1191.5913299358601 44.485 2 -0.8229637760929674 0.24916096507021965 1.0 ['ENSG00000143196|ENST00000367817|DPT'] 135443 6075 YDYFQIKMQNY True H1975_Epitope_Rep3 1511.67550157399 1511.67440993586 28.38 2 -0.8229783871913494 0.24916819104959165 1.0 ['ENSG00000205413|ENST00000379958|SAMD9'] 107697 7082 TALKDFHKKQI True H1975_Epitope_Rep2 1327.76122023363 1327.75957490379 32.172 3 -0.8229842014129357 0.24916819104959165 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 57576 18791 LELERRFVFQK True NCI_RA007_Epitope_Rep1 1463.8248831193498 1463.82378993586 77.235 2 -0.8230195747199333 0.24917900558852335 1.0 ['ENST00000550249.2_1_2:74725056-74728711:-|nuORF', 'nc|ENSG00000179528|Q6XYB7-2|LBX2', 'ENSG00000179528|ENST00000377566|LBX2'] 62583 11532 LLVCFPLL True NCI_RA007_Epitope_Rep5 916.5455970517598 916.54448993586 51.008 2 -0.8231376691231136 0.2492762390355615 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 57354 13037 LEHFRTHPTVW True H1975_Epitope_Rep1 1421.72041805081 1421.71932993586 55.232 2 -0.8232186553517004 0.24929786406648327 1.0 ['MMAA|p.R386W|1|0.32|ENSG00000151611|chr4:145655333-145655333|C/T|missense_variant'] 42164 2603 IEFGYWRRFQK True NCI_RA007_Epitope_Rep5 1528.7939173442398 1528.79227490379 14.729 3 -0.8232201151676496 0.24929786406648327 1.0 ['ENST00000450453.6_2_1:163292714-163292795:+|nuORF'] 122032 9899 VGQPAVAGLS True PC9_epitope_Rep2 897.4919812557699 897.4914349679301 43.408 1 -0.8232566912932894 0.24932307869570228 1.0 ['ENST00000470411.2_1_16:624643-626255:+|nuORF'] 32873 11590 GILHNVKL True PC9_epitope_Rep5 892.54943656224 892.54832993586 49.577 2 -0.8233026919078191 0.2493338902251091 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 90815 16196 RKSRLGGP True H1975_Epitope_Rep2 869.5195334162897 869.51842993586 67.507 2 -0.8233232763479901 0.24935551234967956 1.0 ['ENST00000251047.5_1_18:57022596-57022647:-|nuORF'] 18192 11139 EIQQTQTP True PC9_epitope_Rep2 943.4610750503099 943.45996993586 48.172 2 -0.8233336822421653 0.24935551234967956 1.0 ['NIFK|p.E276Q|1|0.08|ENSG00000155438|chr2:121727780-121727780|C/G|missense_variant'] 64643 11208 LRGLLDQGI True PC9_epitope_Rep4 983.5763795860698 983.57528993586 50.888 2 -0.8233476649528076 0.2493627316848366 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 83653 2761 QEAEREEFFD True H1975_Epitope_Rep3 1298.5415101989797 1298.53987490379 14.704 3 -0.8233499631471635 0.2493627316848366 1.0 ['ENSG00000121879|ENST00000263967|PIK3CA'] 2548 12230 AERERPRHFRE True H1975_Epitope_Rep1 1481.75999144701 1481.75888993586 52.065 2 -0.8233834615041493 0.24938794320112906 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant', 'nc|ENSG00000030066|Q12769-2|NUP160', 'ENST00000529863.1_1_11:47861610-47869870:-|nuORF'] 108775 3534 TEPQDRVPP True H1975_Epitope_Rep2 1037.5141732523298 1037.5130699358601 18.464 2 -0.8235313320848596 0.2494851596365155 1.0 ['SPOCD1|p.R938Gfs*122|1|0.29|ENSG00000134668|chr1:31792365-31792365|G/-|frameshift_variant', 'nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-3|SPOCD1'] 102784 6519 SQERKHVCK True NCI_RA007_Epitope_Rep5 1113.5713112889698 1113.57020993586 31.74 2 -0.8235503458901238 0.24949596774193547 1.0 ['ENSG00000118156|ENST00000391901|ZNF541', 'nc|ENSG00000118156|Q9H0D2-2|ZNF541'] 129754 4666 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 23.041 2 -0.8235600194173969 0.2495067755360666 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 13823 13466 DQVTRQLYEP True NCI_RA007_Epitope_Rep2 1247.6146155695901 1247.61350993586 57.025 2 -0.8236482409846129 0.2495427904900422 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 64887 19476 LSASFQLSV True PC9_epitope_Rep2 950.50729696674 950.50618993586 80.294 2 -0.8236490922059188 0.2495427904900422 1.0 ['nc|nan|A6NN90|C2orf81', 'ENSG00000284308|ENST00000684111|C2orf81'] 12294 10484 DISRRQHP True NCI_RA007_Epitope_Rep4 1007.52607534871 1007.52496993586 47.175 2 -0.8237129965429738 0.2495679972351823 1.0 ['ENST00000328089.10_1_1:9427712-9428249:+|nuORF'] 37018 23511 GVRWARRA True PC9_epitope_Rep1 970.5573159073398 970.55676496793 95.222 1 -0.823744513866012 0.24957880336957305 1.0 ['ENST00000415992.5_1_9:139702603-139703092:+|nuORF'] 71605 16911 MLKSSTLII True PC9_epitope_Rep6 1004.59400379616 1004.59290993586 77.576 2 -0.8237629826791487 0.24958960919275408 1.0 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant'] 59657 10346 LGSRVYLRAW True NCI_RA007_Epitope_Rep2 1219.6825759901096 1219.6814699358602 44.833 2 -0.8237655923322907 0.2495932266843295 1.0 ['ENST00000397289.6_1_22:36545187-36556848:-|nuORF', 'ENST00000432700.5_1_22:36545365-36556848:-|nuORF', 'ENST00000349314.6_1_22:36541572-36556848:-|nuORF'] 36756 16221 GVPAWPRLRL True PC9_epitope_Rep5 1163.6927467509897 1163.69110490379 67.386 3 -0.8237874776293304 0.2495932266843295 1.0 ['ENST00000361658.6_1_17:19687046-19689386:-|nuORF'] 68918 13968 LVFFFFFFLRQ True NCI_RA007_Epitope_Rep2 1509.8172785577697 1509.8161899358602 58.989 2 -0.8237913078009774 0.2495932266843295 1.0 ['ENST00000294008.3_1_16:3632019-3632346:-|nuORF'] 78341 14488 PATGDLLI True PC9_epitope_Rep5 798.44871946146 798.44762993586 60.729 2 -0.8238293610687061 0.2496040316774658 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 133153 14942 WDCSDYEDTEE True NCI_RA007_Epitope_Rep5 1390.4507061589 1390.44960993586 64.14 2 -0.8238740346874058 0.24961483635944767 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7', 'nc|ENSG00000146205|Q6IWH7-3|ANO7'] 32193 16032 GFEAVKEKAL True PC9_epitope_Rep4 1090.60225998074 1090.60116993586 69.598 2 -0.8238979298626791 0.24961845250093587 1.0 ['ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 80406 13423 PLIRQAPPV True PC9_epitope_Rep5 989.6022004110898 989.60110993586 56.647 2 -0.8239401311295098 0.24961845250093587 1.0 ['MAGEL2|p.Q863Rfs*41|1|0.27|ENSG00000254585|chr15:23645156-23645156|G/-|frameshift_variant', 'MAGEL2|p.Q863Pfs*45|1|0.15|ENSG00000254585|chr15:23645155-23645156|-/G|frameshift_variant', 'MAGEL2|p.H1085Qfs*21|2|0.21|ENSG00000254585|chr15:23644488-23644488|G/-|frameshift_variant', 'ENSG00000254585|ENST00000650528|MAGEL2'] 30869 13914 GARHHARPNF True PC9_epitope_Rep1 1161.59040694077 1161.58876490379 58.356 3 -0.8239574376809427 0.24961845250093587 1.0 ['AluSx1_dup39678|chr6:158168952-158169236:+|1.0979164187189252|0.0024502072239592|8.81|331.0|13|2|anti-sense'] 119555 19126 VERFLKTL True PC9_epitope_Rep1 1004.6018660579199 1004.60076993586 78.359 2 -0.823971257951178 0.249625662289795 1.0 ['ENST00000500538.6_1_4:68586658-68594368:+|nuORF'] 119330 8818 VELTQQLLRQP True H1975_Epitope_Rep3 1323.7510494727499 1323.74994993586 38.925 2 -0.8239861161983081 0.249625662289795 1.0 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP'] 41555 15802 IDEDAFRKLP True H1975_Epitope_Rep2 1202.62953735774 1202.62844993586 65.969 2 -0.8240097841811128 0.2496508631239472 1.0 ['ENSG00000083782|ENST00000261172|EPYC'] 137654 17339 YLYKLRTKWML True PC9_epitope_Rep5 1513.8479270630498 1513.8468299358601 71.694 2 -0.8240462657701368 0.24966166604278844 1.0 ['ENSG00000203909|ENST00000370370|DPPA5'] 33296 10007 GLATPPGHPV True NCI_RA007_Epitope_Rep3 944.5079656730799 944.50686993586 46.455 2 -0.824124980888808 0.24969407293301277 1.0 ['ENST00000463515.1_1_10:103339125-103339206:-|nuORF'] 105932 6077 SVLEDAIP True NCI_RA007_Epitope_Rep2 842.4385487005799 842.43744993586 28.244 2 -0.8241281122365677 0.24969407293301277 1.0 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 26519 20275 FITSDSLTGIP True PC9_epitope_Rep1 1149.59175486669 1149.59064993586 82.815 2 -0.8241624673334522 0.24969407293301277 1.0 ['ENST00000514075.2_1_4:8176279-8176723:+|nuORF'] 13625 8362 DPTGYADPPP True H1975_Epitope_Rep3 1028.4450906329998 1028.4439899358601 37.147 2 -0.8242089035175565 0.24971208107796844 1.0 ['ENST00000521244.1_1_1:178511933-178514557:+|nuORF', 'ENST00000367638.1_1_1:178514055-178514557:+|nuORF'] 59191 13866 LGFQKRWRK True PC9_epitope_Rep5 1217.71454482473 1217.7134499358601 58.356 2 -0.8242139285854999 0.24971208107796844 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 54508 8932 LAADPSHP True PC9_epitope_Rep5 806.3922672145 806.39116993586 39.301 2 -0.8242400301863939 0.24971208107796844 1.0 ['ENST00000378756.7_1_1:1469482-1469635:+|nuORF'] 115268 11744 TVDLFTWW True H1975_Epitope_Rep1 1066.5123823471802 1066.51128993586 50.166 2 -0.8242631628532034 0.24973727776578133 1.0 ['ENST00000392396.7_2_3:195796375-195798346:-|nuORF'] 10596 20042 CRSAKVGWLQ True NCI_RA007_Epitope_Rep5 1146.5967977608198 1146.59515490379 84.015 3 -0.8243797516597314 0.24980566032303572 1.0 ['nc|ENSG00000179988|Q8IV42|PSTK'] 100994 16439 SLSYHSQKL True PC9_epitope_Rep5 1061.55055876105 1061.54946993586 68.231 2 -0.8243930692524886 0.2498164596139174 1.0 ['CD22|p.P638S|1|0.32|ENSG00000012124|chr19:35341842-35341842|C/T|missense_variant'] 24958 26319 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 111.81 2 -0.8244585667144972 0.2498668470828715 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 127998 23747 VRQLRHLHRTR True PC9_epitope_Rep3 1470.8756303359398 1470.8745299358602 96.628 2 -0.8244587402533111 0.2498668470828715 1.0 ['nc|ENSG00000184274|P59091|LINC00315'] 19567 7430 ELRARSGF True H1975_Epitope_Rep1 934.4984636185399 934.49736993586 33.583 2 -0.824480277934246 0.2498740481639821 1.0 ['ENST00000369980.7_2_X:153276291-153276363:-|nuORF'] 19197 5111 ELKNAINKN True NCI_RA007_Epitope_Rep1 1042.5771078620598 1042.5760099358602 23.965 2 -0.8244836616978432 0.2498740481639821 1.0 ['ENSG00000176231|ENST00000322107|OR10H4', 'ENSG00000171936|ENST00000641646|OR10H3'] 62040 21182 LLLVRWKFQQE True NCI_RA007_Epitope_Rep2 1458.83471952706 1458.83362993586 87.617 2 -0.8244953867064425 0.2498812488304809 1.0 ['ENST00000360409.7_1_2:206547732-206547855:+|nuORF'] 128921 8396 VSTRKESL True PC9_epitope_Rep4 918.5134449763399 918.51234993586 39.757 2 -0.8245032680153707 0.2498812488304809 1.0 ['ENSG00000186439|ENST00000334268|TRDN'] 129621 20781 VTGYKVLYRPD True PC9_epitope_Rep3 1309.7030366511697 1309.70192993586 85.206 2 -0.8245713606705811 0.2499208336931802 1.0 ['nc|ENSG00000018236|Q12860-2|CNTN1', 'ENSG00000018236|ENST00000551295|CNTN1'] 118000 8026 VASIKVSAE True H1975_Epitope_Rep3 902.50729696674 902.50618993586 35.845 2 -0.8245963535810986 0.2499460237495502 1.0 ['nc|ENSG00000185504|Q0VG06-3|FAAP100', 'ENSG00000185504|ENST00000327787|FAAP100', 'C17orf70-NPLOC4|1|fusion', 'nc|ENSG00000185504|Q0VG06-2|FAAP100'] 15344 5219 EALEEFKA True NCI_RA007_Epitope_Rep1 935.4600124211498 935.45890993586 24.383 2 -0.8246240415238817 0.24995681962116414 1.0 ['ENSG00000167972|ENST00000301732|ABCA3'] 58327 14158 LETRRQLALK True H1975_Epitope_Rep1 1226.7459045226599 1226.74480993586 59.633 2 -0.8246679393390122 0.24998920537140717 1.0 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000427397.5_1_2:216176945-216197107:+|nuORF'] 60233 13651 LIDPWKFQRMK True NCI_RA007_Epitope_Rep1 1460.7962258433597 1460.7951299358601 57.112 2 -0.8246884823692658 0.24998920537140717 1.0 ['ENSG00000125531|ENST00000370097|FNDC11', 'FNDC11|p.G115Afs*60|1|0.2|ENSG00000125531|chr20:63556005-63556005|G/-|frameshift_variant'] 20092 10798 ENIAVGLATEK True H1975_Epitope_Rep3 1143.6135529404298 1143.6129749679299 46.613 1 -0.824694711101859 0.24998920537140717 1.0 ['nc|ENSG00000140326|Q8IWY9-1|CDAN1', 'ENSG00000140326|ENST00000356231|CDAN1'] 11364 12111 DFEYSTQSY True H1975_Epitope_Rep2 1138.44548455582 1138.44497496793 51.668 1 -0.824721618682857 0.24999640189404299 1.0 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 125061 24760 VLPGKKKKKT True H1975_Epitope_Rep3 1125.75976368165 1125.75811490379 102.98 3 -0.8247282860770905 0.24999640189404299 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 140167 17657 YVTGWFSPYH True PC9_epitope_Rep5 1255.56620882519 1255.5651099358602 72.93 2 -0.8248028591042041 0.2500215883250338 1.0 ['ENST00000577944.5_2_17:80397520-80400257:+|nuORF', 'ENST00000337014.10_2_17:80398960-80400257:+|nuORF', 'ENST00000582429.5_3_17:80398119-80400257:+|nuORF', 'ENST00000578616.5_3_17:80398383-80400257:+|nuORF', 'ENSG00000169660|ENST00000327949|HEXD'] 83657 8237 QEAGLGEPSL True H1975_Epitope_Rep3 999.48728979815 999.48618993586 36.667 2 -0.8248186259735115 0.2500251852917896 1.0 ['nc|ENSG00000171462|Q6UY11-2|DLK2', 'ENSG00000171462|ENST00000372488|DLK2'] 135653 3506 YEFIYKHQQK True NCI_RA007_Epitope_Rep1 1382.6982856239 1382.69665490379 17.553 3 -0.8248227471398997 0.2500251852917896 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'nc|ENSG00000173821|Q63HN8-5|RNF213', 'ENST00000573548.1_1_17:78263625-78265730:+|nuORF'] 77792 20866 PAEFPSLE True H1975_Epitope_Rep2 888.4228986364399 888.42180993586 86.396 2 -0.8248299618852915 0.2500251852917896 1.0 ['ENST00000460804.5_1_1:21048287-21050865:-|nuORF', 'nc|ENSG00000189410|Q6ZV89-2|SH2D5', 'SH2D5|p.V374Yfs*2|1|0.31|ENSG00000189410|chr1:20721944-20721945|CC/-|frameshift_variant', 'ENSG00000189410|ENST00000444387|SH2D5'] 63353 13949 LPEPLSVTAP True H1975_Epitope_Rep1 1022.56481184286 1022.56370993586 58.81 2 -0.8248580163489527 0.25003597847048326 1.0 ['ENST00000264025.7_1_11:119535043-119535469:-|nuORF'] 96095 5419 SEDMELPLEDY True H1975_Epitope_Rep2 1339.5489636481898 1339.54786993586 25.872 2 -0.8249125534493569 0.25004677133852377 1.0 ['APBA2|p.G40D|1|0.25|ENSG00000034053|chr15:29054003-29054003|G/A|missense_variant'] 84162 5595 QERLTQVQEA True NCI_RA007_Epitope_Rep4 1200.6098645423197 1200.6087699358602 28.121 2 -0.8249456701543576 0.2500827469095828 1.0 ['ENSG00000171219|ENST00000342711|CDC42BPG'] 74325 15207 NILSLINVN True PC9_epitope_Rep4 998.5760452329 998.57494993586 66.418 2 -0.8249559749348695 0.2500827469095828 1.0 ['nc|ENSG00000164253|Q9HAD4-2|WDR41', 'ENSG00000164253|ENST00000296679|WDR41', 'ENST00000502528.5_1_5:76728962-76747206:-|nuORF'] 42893 17518 IFTKENLTAP True PC9_epitope_Rep2 1132.61282466444 1132.61172993586 72.644 2 -0.8249837207121001 0.2501007310193979 1.0 ['ENSG00000047457|ENST00000264613|CP', 'ENST00000490639.5_1_3:148895590-148939579:-|nuORF', 'ENST00000489736.5_1_3:148904295-148925363:-|nuORF'] 33525 6724 GLHSNGFSL True PC9_epitope_Rep4 930.45593010022 930.45482993586 33.054 2 -0.8249842621978501 0.2501007310193979 1.0 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 93519 23354 RSMHAYQRE True NCI_RA007_Epitope_Rep5 1176.54582481712 1176.54418490379 97.12 3 -0.8249953880051974 0.2501007310193979 1.0 ['ENSG00000139437|ENST00000405876|TCHP', 'ENST00000537218.1_1_12:110338138-110342619:+|nuORF'] 41472 9572 IAYRKAVP True PC9_epitope_Rep6 916.5494365622399 916.54832993586 47.119 2 -0.8250771990657636 0.2501834611565967 1.0 ['ENST00000573617.1_1_16:3493766-3498541:+|nuORF', 'ENST00000572169.5_2_16:3493766-3526228:+|nuORF', 'nc|ENSG00000122390|Q9H7X0-2|NAA60'] 140047 27235 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 113.94 3 -0.8250917525436131 0.2501834611565967 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 78242 3276 PAQKQEMHFE True PC9_epitope_Rep2 1243.56555720219 1243.5639149037902 17.856 3 -0.8250991364473049 0.2501834611565967 1.0 ['ENST00000496563.1_1_3:44598878-44609942:+|nuORF', 'nc|ENSG00000196345|Q9P0L1-2|ZKSCAN7', 'ENSG00000196345|ENST00000426540|ZKSCAN7'] 65252 8583 LSEGSKASLGP True H1975_Epitope_Rep1 1044.54513902744 1044.5440499358601 37.942 2 -0.8251089471693372 0.2501834611565967 1.0 ['ENST00000475491.1_1_2:95963129-95976459:+|nuORF'] 61072 5697 LLAVSHVG True PC9_epitope_Rep2 794.46503823194 794.46394993586 27.299 2 -0.8251242841838167 0.2501834611565967 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 87557 17412 QTLSKLIDYIY True PC9_epitope_Rep4 1355.7336680731098 1355.73256993586 74.969 2 -0.8252017166959335 0.2502302158273381 1.0 ['ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF', 'nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3'] 92688 23482 RRHCRHRRRRR True PC9_epitope_Rep1 1643.9464613741097 1643.94536993586 95.109 2 -0.8252106762089508 0.2502302158273381 1.0 ['ENST00000361078.6_1_2:20550380-20550560:-|nuORF'] 129919 6347 VTLTTTEKPLR True NCI_RA007_Epitope_Rep3 1257.72925139901 1257.72814993586 31.97 2 -0.8252155570854812 0.2502302158273381 1.0 ['ENSG00000230873|ENST00000536551|STMND1'] 101425 4711 SNNDDDED True H1975_Epitope_Rep1 922.27881315354 922.27770993586 23.169 2 -0.8252487349421507 0.25026978029093105 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 80576 19151 PLNPRQGIF True PC9_epitope_Rep2 1040.5767139392399 1040.57560993586 79.035 2 -0.8253162396840493 0.25030934361601104 1.0 ['ENST00000588362.1_1_19:45683194-45684626:+|nuORF'] 36872 7458 GVQEYIQQP True NCI_RA007_Epitope_Rep3 1060.5189242795998 1060.5178299358602 36.457 2 -0.8253583499266124 0.2503165285451197 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000484201.5_1_1:114440516-114447658:-|nuORF', 'ENST00000489499.5_1_1:114442984-114447339:-|nuORF'] 48832 14034 KERRQREERRQ True H1975_Epitope_Rep1 1569.8560170901699 1569.8549299358601 59.145 2 -0.8253672659429759 0.2503165285451197 1.0 ['nc|ENSG00000046651|O75665-3|OFD1', 'ENSG00000046651|ENST00000340096|OFD1', 'ENST00000490265.5_1_X:13771424-13787224:+|nuORF'] 46518 10242 ITQEETESLRR True H1975_Epitope_Rep1 1360.6946567954399 1360.6935499358601 44.339 2 -0.825381437584443 0.2503273145816848 1.0 ['nc|ENSG00000148356|Q6UWE0-2|LRSAM1', 'ENSG00000148356|ENST00000300417|LRSAM1', 'ENST00000483302.5_1_9:130241670-130248115:+|nuORF', 'ENST00000498513.5_1_9:130241670-130248879:+|nuORF'] 68134 4849 LTPLHCGA True PC9_epitope_Rep4 810.40580910366 810.40470993586 25.238 2 -0.8254137466817805 0.2503381003078871 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3'] 100275 17968 SLLRRDHPV True PC9_epitope_Rep2 1091.61997573355 1091.6188699358602 74.417 2 -0.8254348368328759 0.2503452839960868 1.0 ['ENSG00000214700|ENST00000429849|C12orf71'] 122958 15948 VGWGSRGS True NCI_RA007_Epitope_Rep3 804.3878505404 804.38730496793 70.399 1 -0.8254371593640869 0.2503452839960868 1.0 ['ENST00000238855.11_1_2:64751466-64751667:+|nuORF'] 33522 12323 GLHSKVIL True PC9_epitope_Rep2 865.53853752537 865.53744993586 52.712 2 -0.8254936365264829 0.25036325185941793 1.0 ['ENST00000494820.5_1_22:20100432-20103278:-|nuORF', 'nc|ENSG00000099899|Q8IZ69-2|TRMT2A', 'ENSG00000099899|ENST00000252136|TRMT2A', 'ENST00000487668.5_1_22:20100432-20101310:-|nuORF', 'ENST00000487378.1_1_22:20100088-20100785:-|nuORF'] 8654 13790 AVASEHLEL True PC9_epitope_Rep1 967.49746055903 967.49636993586 57.888 2 -0.8255126092960254 0.25036325185941793 1.0 ['APTX|p.R218S|1|0.23|ENSG00000137074|chr9:32984747-32984747|C/A|missense_variant'] 38861 7470 HIHEACSSI True PC9_epitope_Rep5 995.44946482079 995.44836993586 33.686 2 -0.8255410871344893 0.25036325185941793 1.0 ['ACOT9-APOO|2|fusion', 'ENSG00000123130|ENST00000379303|ACOT9'] 14373 4469 DTEKSRFFRFC True NCI_RA007_Epitope_Rep2 1434.6714192530599 1434.67032993586 22.017 2 -0.8256271883813769 0.25036683258048736 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 78404 5852 PAVVDHRG True PC9_epitope_Rep1 849.44569976969 849.44460993586 27.323 2 -0.8256444936482283 0.25036683258048736 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A'] 19274 11815 ELLMAMEKV True PC9_epitope_Rep2 1062.54533935158 1062.54424993586 50.777 2 -0.8256456146452463 0.25036683258048736 1.0 ['nc|ENSG00000082805|Q8IUD2-3|ERC1', 'ENSG00000082805|ENST00000360905|ERC1', 'nc|ENSG00000082805|Q8IUD2-4|ERC1', 'nc|ENSG00000082805|Q8IUD2-2|ERC1', 'nc|ENSG00000082805|Q8IUD2-5|ERC1', 'WNK1-ERC1|2|fusion', 'WNK1-ERC1|1|fusion', 'WNK1-ERC1|4|fusion', 'WNK1-ERC1|3|fusion'] 44738 7999 IPRDQSPSL True PC9_epitope_Rep4 1011.53490869691 1011.53380993586 38.218 2 -0.8257900166184503 0.2503776163417967 1.0 ['ENST00000595750.1_3_19:42811211-42813854:+|nuORF', 'ENST00000499536.2_1_19:42813698-42813854:+|nuORF'] 120948 11893 VGEKRKLII True NCI_RA007_Epitope_Rep4 1054.6862643882198 1054.6851699358601 52.744 2 -0.8258224479259195 0.25038839979285343 1.0 ['ENST00000479939.1_1_7:30062251-30066124:-|nuORF', 'ENSG00000106080|ENST00000222803|FKBP14'] 57665 4879 LEMGGLSPAGD True PC9_epitope_Rep3 1045.47501086229 1045.47390993586 23.867 2 -0.8258590131451593 0.2503991829336709 1.0 ['nc|ENSG00000046651|O75665-3|OFD1', 'ENSG00000046651|ENST00000340096|OFD1', 'ENST00000490265.5_1_X:13771424-13787224:+|nuORF'] 124241 19401 VLCAFQLVAA True PC9_epitope_Rep5 1033.5630380210498 1033.5619499358602 79.672 2 -0.8259152360062211 0.25043871004861773 1.0 ['ENSG00000101198|ENST00000370316|NKAIN4'] 101123 6094 SLVGQGQSSGP True PC9_epitope_Rep3 1015.4934378077498 1015.49234993586 28.489 2 -0.8259486758093477 0.25043871004861773 1.0 ['ENSG00000143631|ENST00000368799|FLG', 'CON__P20930'] 3551 4480 AGNGELCIKVP True NCI_RA007_Epitope_Rep5 1099.5695799534699 1099.56848993586 23.883 2 -0.8259526968410538 0.25043871004861773 1.0 ['ENSG00000064313|ENST00000378164|TAF2', 'TAF2|p.K203Nfs*4|1|0.21|ENSG00000064313|chr8:119801971-119801977|TTCTAAT/-|frameshift_variant'] 125396 7023 VLTECARMHRP True H1975_Epitope_Rep3 1311.65399536711 1311.65288993586 31.977 2 -0.825952786489714 0.25043871004861773 1.0 ['ENST00000530149.1_1_11:212394-212514:+|nuORF', 'ENST00000527039.1_1_11:209766-212514:+|nuORF', 'RIC8A|p.L352Rfs*12|1|0.29|ENSG00000177963|chr11:212501-212501|T/-|frameshift_variant', 'nc|ENSG00000177963|Q9NPQ8-2|RIC8A', 'nc|ENSG00000177963|Q9NPQ8-4|RIC8A', 'ENSG00000177963|ENST00000526104|RIC8A', 'nc|ENSG00000177963|Q9NPQ8-3|RIC8A'] 140049 27358 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 114.62 3 -0.8259587532762707 0.25043871004861773 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 4344 19128 AINSSLSTL True NCI_RA007_Epitope_Rep2 904.4865615221601 904.48601496793 79.269 1 -0.826000207772715 0.25044949153517543 1.0 ['ENSG00000237649|ENST00000428849|KIFC1'] 108159 6152 TDRRYNNGTWY True PC9_epitope_Rep6 1444.6483753093598 1444.64671490379 32.096 3 -0.8260237164615148 0.2504530418524378 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'ENST00000488064.5_1_18:6961676-6965410:-|nuORF', 'ENST00000490190.1_1_18:6964066-6965410:-|nuORF'] 4065 13254 AHQQVWAAL True PC9_epitope_Rep6 1022.5297637468199 1022.52866993586 62.632 2 -0.8260471829791187 0.2504530418524378 1.0 ['ENSG00000170881|ENST00000303545|RNF139'] 62329 12389 LLRGLWQRWRR True NCI_RA007_Epitope_Rep1 1538.9058678350598 1538.9042249037902 52.165 3 -0.8260527659966079 0.2504530418524378 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9'] 103196 8906 SQQALERIWKE True H1975_Epitope_Rep1 1386.7255630008997 1386.72446993586 39.16 2 -0.8260535083518781 0.2504530418524378 1.0 ['ENST00000585266.5_1_17:9939966-9940032:-|nuORF'] 60021 21016 LHRHWIWPRNI True PC9_epitope_Rep1 1526.8371195688997 1526.8354649037901 85.667 3 -0.8260589382843836 0.2504530418524378 1.0 ['ENST00000537507.1_1_12:12841836-12848440:-|nuORF', 'ENST00000545876.5_1_12:12837279-12848440:-|nuORF', 'ENST00000332427.6_1_12:12815387-12848440:-|nuORF'] 27196 12411 FLSRTFLRVN True NCI_RA007_Epitope_Rep4 1251.7087907379498 1251.7076899358601 54.737 2 -0.82606143696722 0.2504530418524378 1.0 ['ENSG00000072840|ENST00000264956|EVC'] 12917 12859 DLNEALTQPV True PC9_epitope_Rep1 1098.55570371114 1098.55460993586 54.336 2 -0.826075800894633 0.2504530418524378 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 12041 9236 DIDQQWGPL True H1975_Epitope_Rep1 1070.50327421546 1070.5021699358601 40.436 2 -0.826083805797695 0.2504638218923933 1.0 ['nc|ENSG00000089091|Q9NVP4-5|DZANK1', 'nc|ENSG00000089091|Q9NVP4|DZANK1', 'ENSG00000089091|ENST00000699568|DZANK1', 'nc|ENSG00000089091|Q9NVP4-2|DZANK1', 'nc|ENSG00000089091|Q9NVP4-4|DZANK1'] 85614 7717 QLNLNNEWTL True H1975_Epitope_Rep3 1243.61970095003 1243.6186099358601 34.668 2 -0.8261082411923176 0.2504853810420951 1.0 ['ENSG00000136802|ENST00000372600|LRRC8A'] 14781 5359 DWQDYWWHVAR True NCI_RA007_Epitope_Rep2 1560.6898461985202 1560.6887499358602 25.464 2 -0.8261691571483571 0.2504853810420951 1.0 ['ENST00000377808.8_1_17:38792689-38792737:-|nuORF'] 111793 9729 TLRAESINERT True H1975_Epitope_Rep3 1288.67352742804 1288.67242993586 42.443 2 -0.8262564863730392 0.2505249230592228 1.0 ['nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1'] 60351 18229 LIHFWNVL True PC9_epitope_Rep1 1040.5807366905199 1040.57962993586 74.908 2 -0.8263362538082635 0.2505357014453153 1.0 ['nc|ENSG00000214198|Q6P2S7|TTC41P', 'nc|ENSG00000214198|Q6P2S7-2|TTC41P', 'ENST00000551270.1_1_12:104237536-104277386:-|nuORF'] 78603 15793 PDSFNIPGSS True PC9_epitope_Rep4 1019.45598966987 1019.45488993586 68.673 2 -0.82636554790829 0.2505608605614358 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 76402 4938 NSLYVLENN True NCI_RA007_Epitope_Rep5 1064.51383889916 1064.51274993586 25.694 2 -0.8264199527522442 0.2505716381207127 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 68892 20143 LVEPLAITFKK True PC9_epitope_Rep1 1257.7696596590097 1257.7680149037901 82.309 3 -0.8264364710768509 0.2505824153700135 1.0 ['ENST00000505451.5_1_4:25314431-25353701:+|nuORF', 'nc|ENSG00000168228|Q9H5U6-3|ZCCHC4', 'ENSG00000168228|ENST00000302874|ZCCHC4'] 136865 18542 YIWVKGRWKWK True PC9_epitope_Rep4 1548.87177374212 1548.8701349037901 79.396 3 -0.8265321837563074 0.2506075727289722 1.0 ['ENST00000373001.3_1_1:39311726-39317298:-|nuORF'] 58735 17119 LFLKAGHTSL True PC9_epitope_Rep5 1085.6233297784902 1085.62222993586 70.869 2 -0.8265480592584707 0.25061834915156744 1.0 ['nc|ENSG00000008323|Q3KR16-3|PLEKHG6', 'nc|ENSG00000008323|Q3KR16-2|PLEKHG6', 'ENSG00000008323|ENST00000684764|PLEKHG6'] 100762 18377 SLRPGDKVL True PC9_epitope_Rep5 983.57637958607 983.57528993586 75.705 2 -0.8266041704013108 0.2506291252642326 1.0 ['nc|nan|Q9NQ32-2|C11orf16', 'ENSG00000176029|ENST00000326053|C11orf16'] 82082 8038 PSYLLTCR True PC9_epitope_Rep5 951.48478770035 951.48368993586 35.856 2 -0.8266634678698835 0.2506399010669811 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 55192 7621 LAPHSAIE True PC9_epitope_Rep4 836.43921740692 836.43812993586 36.695 2 -0.8266801164453353 0.2506506765598263 1.0 ['nc|ENSG00000167566|Q9HCH0-2|NCKAP5L', 'ENSG00000167566|ENST00000335999|NCKAP5L'] 1751 6879 AEGYFEQPSVP True H1975_Epitope_Rep3 1222.5506183307 1222.5495299358602 31.419 2 -0.8266976412691911 0.2506758311284942 1.0 ['LAMA2|p.G853E|1|0.12|ENSG00000196569|chr6:129287867-129287867|G/A|missense_variant'] 94489 16284 RYHKAHLTRRL True NCI_RA007_Epitope_Rep3 1449.8429332253297 1449.84127490379 71.751 3 -0.8268045882019086 0.2506793966670022 1.0 ['ENSG00000166266|ENST00000393094|CUL5'] 140050 27484 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 115.31 3 -0.8268385040197027 0.2506793966670022 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 1988 9996 AEKKFKEV True H1975_Epitope_Rep2 977.5545815123298 977.55348993586 43.44 2 -0.8268562759490854 0.2506793966670022 1.0 ['ENST00000477917.5_1_2:220144555-220145531:+|nuORF', 'ENST00000485220.1_1_2:220144701-220145531:+|nuORF', 'ENST00000480537.5_1_2:220144555-220146923:+|nuORF', 'nc|ENSG00000135924|P25686-2|DNAJB2', 'ENSG00000135924|ENST00000336576|DNAJB2'] 130277 10070 VTTASIRP True PC9_epitope_Rep3 843.48141657207 843.48030993586 43.688 2 -0.826913261003202 0.25068296189791517 1.0 ['nc|ENSG00000122367|O75112-3|LDB3', 'nc|ENSG00000122367|O75112-2|LDB3', 'ENSG00000122367|ENST00000361373|LDB3', 'nc|ENSG00000122367|O75112-7|LDB3'] 112073 14023 TLTKEQLQEYL True PC9_epitope_Rep6 1364.7187462849597 1364.7176499358602 65.794 2 -0.8269620368223031 0.25068296189791517 1.0 ['UPF3B|p.H70Y|2|0.21|ENSG00000125351|chrX:119851822-119851822|G/A|missense_variant'] 87194 20963 QSLIPFVQL True PC9_epitope_Rep6 1043.60153170475 1043.60097496793 93.426 1 -0.8269712956454123 0.25068296189791517 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'nc|ENSG00000122512|P54278-2|PMS2', 'nc|ENSG00000122512|P54278-3|PMS2'] 62204 13675 LLPQEHVYDK True PC9_epitope_Rep2 1240.6451874218799 1240.6435349037902 57.891 3 -0.8270758853431501 0.2507476420519899 1.0 ['nc|ENSG00000163093|Q8N3I7-2|BBS5', 'ENSG00000163093|ENST00000295240|BBS5'] 131267 9091 VVQIRGKQPA True NCI_RA007_Epitope_Rep2 1094.6560268890998 1094.65492993586 39.966 2 -0.8271063962843344 0.2507476420519899 1.0 ['COL24A1|p.H145Q|1|0.46|ENSG00000171502|chr1:86125901-86125901|G/C|missense_variant'] 116096 6602 TVSHYQREKKR True NCI_RA007_Epitope_Rep2 1430.7742445288197 1430.7731499358601 30.288 2 -0.8271379826335787 0.2507548092129856 1.0 ['nc|ENSG00000101605|P52179-2|MYOM1', 'ENSG00000101605|ENST00000356443|MYOM1'] 12673 5361 DLERIFGLP True H1975_Epitope_Rep2 1058.5760452328998 1058.57494993586 25.665 2 -0.8271514023641129 0.2507548092129856 1.0 ['ENSG00000119943|ENST00000370575|PYROXD2'] 115952 11122 TVPSWVLS True NCI_RA007_Epitope_Rep5 887.47526856247 887.47416993586 49.417 2 -0.8272316458744516 0.25080510667663464 1.0 ['nc|ENSG00000274576|P01814|IGHV2-70', 'nc|ENSG00000211974|A0A0C4DH43|IGHV2-70D'] 36914 16325 GVQTRKAR True NCI_RA007_Epitope_Rep5 914.5409971368598 914.5404449679301 69.55 1 -0.8272413260445801 0.25080510667663464 1.0 ['THSD7A|p.V1127A|1|0.23|ENSG00000005108|chr7:11424699-11424699|A/G|missense_variant'] 92955 20001 RRPRRKRAHPA True NCI_RA007_Epitope_Rep4 1399.84974994127 1399.84864993586 86.498 2 -0.8272996873492687 0.250830254323792 1.0 ['ENST00000460758.1_1_3:48511100-48514492:-|nuORF'] 66131 2741 LSPCPQPTCP True H1975_Epitope_Rep2 1041.46233800361 1041.46124993586 14.591 2 -0.8273449690075301 0.2508554012478795 1.0 ['ENST00000333046.8_3_9:140086129-140086441:-|nuORF'] 63457 17745 LPGVSLVSG True PC9_epitope_Rep5 827.47526856247 827.47472496793 73.274 1 -0.8273574022620374 0.2508625646923519 1.0 ['ENST00000597852.5_1_19:49838763-49839342:+|nuORF'] 8672 6942 AVAWEAGK True NCI_RA007_Epitope_Rep1 830.4286527232198 830.42754993586 31.007 2 -0.8273686983627969 0.2508625646923519 1.0 ['ENST00000507102.5_2_4:100003111-100009857:-|nuORF', 'ADH5|p.S128Afs*33|1|0.14|ENSG00000197894|chr4:99076886-99076886|T/-|frameshift_variant', 'ENST00000508511.5_1_4:99997418-100009857:-|nuORF', 'ENSG00000197894|ENST00000296412|ADH5'] 45691 4191 ISLFPPLMY True H1975_Epitope_Rep3 1079.5725400755898 1079.57144993586 21.239 2 -0.827431642227498 0.25087333419588564 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|353|2|anti-sense'] 33922 8160 GMGFICGF True NCI_RA007_Epitope_Rep4 830.3455173462199 830.34440993586 38.176 2 -0.8274811494410758 0.2508841033897818 1.0 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1', 'SLC44A1|p.A288Pfs*14|1|0.25|ENSG00000070214|chr9:105361290-105361290|G/-|frameshift_variant'] 118558 6242 VDYICQYLS True NCI_RA007_Epitope_Rep1 1102.50049733414 1102.49940993586 28.314 2 -0.8275198228016374 0.2508948722740537 1.0 ['nc|ENSG00000140287|P19113-2|HDC', 'ENSG00000140287|ENST00000267845|HDC', 'ENST00000558761.5_1_15:50545740-50557820:-|nuORF', 'ENST00000558679.1_1_15:50546296-50557931:-|nuORF', 'HDC|p.E13Q|1|0.16|ENSG00000140287|chr15:50263402-50263402|C/G|missense_variant'] 39895 10860 HQKNLPYTL True NCI_RA007_Epitope_Rep5 1112.59784330664 1112.59674993586 48.409 2 -0.8275525686324469 0.25093439135184864 1.0 ['ENST00000203630.9_2_12:6857197-6857296:-|nuORF'] 81377 17965 PPTLGHIIE True NCI_RA007_Epitope_Rep3 975.53893144819 975.53782993586 78.72 2 -0.827565846532242 0.25094515920362254 1.0 ['ENST00000273221.8_2_3:12940565-12940730:-|nuORF'] 138107 20758 YQGWITLAVP True PC9_epitope_Rep3 1146.6073453611798 1146.6062499358602 85.115 2 -0.8275838114815 0.2509487120515179 1.0 ['nc|ENSG00000010704|Q30201-10|HFE', 'nc|ENSG00000010704|Q30201-7|HFE', 'nc|ENSG00000010704|Q30201-8|HFE', 'nc|ENSG00000010704|Q30201-5|HFE', 'nc|ENSG00000010704|Q30201-3|HFE', 'ENSG00000010704|ENST00000357618|HFE', 'ENST00000486147.1_1_6:26091287-26093193:+|nuORF', 'nc|ENSG00000010704|Q30201-6|HFE', 'ENST00000483782.1_1_6:26091468-26093193:+|nuORF', 'nc|ENSG00000010704|Q30201-4|HFE', 'nc|ENSG00000010704|Q30201-2|HFE'] 25802 11466 FGAGLGGNVK True PC9_epitope_Rep6 918.49231560894 918.49120993586 55.17 2 -0.8275840099946046 0.2509487120515179 1.0 ['ENSG00000262152|ENST00000573315|GREP1'] 126033 13307 VPAPSLSAP True PC9_epitope_Rep1 837.45961849833 837.4590749679301 56.048 1 -0.8275933134296565 0.2509487120515179 1.0 ['ENST00000294256.12_2_11:64895574-64895820:-|nuORF'] 105376 3902 STYTIEWYQQR True NCI_RA007_Epitope_Rep4 1473.6888431390098 1473.68719490379 21.234 3 -0.8276670646349228 0.2509594790783251 1.0 ['nc|ENSG00000211672|A0A075B6K6|IGLV4-3'] 134596 10776 WWCWRTCWCWR True H1975_Epitope_Rep2 1670.6845843027397 1670.68294490379 46.48 3 -0.8277160875197683 0.2509810122033606 1.0 ['ENST00000246115.4_1_19:3178863-3179049:+|nuORF'] 140139 21084 YVRRLERK True PC9_epitope_Rep6 1118.6672602791398 1118.6661699358601 93.925 2 -0.8277190834091507 0.2509810122033606 1.0 ['ENSG00000213380|ENST00000306875|COG8'] 124082 19932 VKRRRWARP True NCI_RA007_Epitope_Rep2 1223.7475762885097 1223.7459449037901 82.531 3 -0.8278342930262361 0.2509917783016156 1.0 ['ENST00000472523.1_1_3:147111214-147111373:+|nuORF'] 83562 4540 QDRLLIPRWR True NCI_RA007_Epitope_Rep1 1351.7836870137098 1351.78204490379 21.76 3 -0.8278773649580906 0.25103129087433346 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 112509 6983 TNWDDMEK True NCI_RA007_Epitope_Rep3 1037.4124106057297 1037.4113099358601 34.576 2 -0.8278842310301047 0.2510384477182896 1.0 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000502306.1_1_5:15450853-15451165:+|nuORF', 'ENST00000457622.1_1_6:46172676-46173294:+|nuORF', 'POTEF|p.H787N|1|0.21|ENSG00000196604|chr2:130075113-130075113|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENST00000576209.5_1_17:79477718-79479174:-|nuORF', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000436287.1_1_1:224052226-224052508:-|nuORF', 'ENSG00000169067|ENST00000423391|ACTBL2'] 44998 9562 IQKREFLRQRF True H1975_Epitope_Rep1 1519.8735646472699 1519.87192490379 41.706 3 -0.827895140410837 0.2510384477182896 1.0 ['ENSG00000150783|ENST00000280358|TEX12'] 88755 11379 RDGDRLWYENP True PC9_epitope_Rep1 1419.6531263366296 1419.6520299358601 48.65 2 -0.8279388054239544 0.2510419960332289 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 57912 9901 LEQLEKAI True NCI_RA007_Epitope_Rep1 942.5385970950199 942.53750993586 42.515 2 -0.8279396790372859 0.2510419960332289 1.0 ['ENSG00000242550|ENST00000238508|SERPINB10'] 74459 7756 NKEILLTTQLD True H1975_Epitope_Rep3 1286.7081816012599 1286.70708993586 34.818 2 -0.8279669094016125 0.2510419960332289 1.0 ['nc|ENSG00000276141|Q1A5X7|WHAMMP3', 'nc|ENSG00000276141|Q1A5X7-2|WHAMMP3'] 85060 7985 QILFYYWNFIP True PC9_epitope_Rep5 1502.7598232512996 1502.75818490379 35.653 3 -0.8281157058069801 0.2510778959471112 1.0 ['ENST00000503862.5_3_4:108746377-108829880:+|nuORF'] 19780 12843 ELTEVITAAEF True PC9_epitope_Rep5 1221.6128842340897 1221.61123490379 54.41 3 -0.8281216474661405 0.2510778959471112 1.0 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D', 'nc|ENSG00000156475|Q00005-6|PPP2R2B', 'ENSG00000156475|ENST00000394411|PPP2R2B', 'nc|ENSG00000156475|Q00005-3|PPP2R2B', 'nc|ENSG00000156475|Q00005-4|PPP2R2B', 'nc|ENSG00000156475|Q00005-5|PPP2R2B', 'ENST00000472664.1_10:133757603-133758980:+|nuORF', 'ENST00000517754.1_1_8:26218621-26220417:+|nuORF', 'ENSG00000221914|ENST00000380737|PPP2R2A', 'nc|ENSG00000221914|P63151-2|PPP2R2A', 'nc|ENSG00000156475|Q00005-2|PPP2R2B'] 96132 6976 SEDWQRSK True H1975_Epitope_Rep3 1034.4781220967798 1034.4770299358602 31.795 2 -0.8281665030711964 0.2511065126171179 1.0 ['SDE2|p.A423Qfs*24|1|0.51|ENSG00000143751|chr1:225985391-225985391|C/-|frameshift_variant'] 29947 7466 FWWVERNFYFY True H1975_Epitope_Rep1 1655.75613485319 1655.75449490379 33.717 3 -0.828213053505681 0.2511065126171179 1.0 ['ENST00000295924.11_2_3:156423406-156423454:+|nuORF'] 69247 7681 LVNQPPHS True PC9_epitope_Rep5 890.4610154806601 890.45990993586 34.49 2 -0.8282291939795747 0.2511065126171179 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 17099 19346 EGRPPENKRS True PC9_epitope_Rep3 1168.59488318452 1168.59322490379 79.636 3 -0.8282345490762086 0.2511065126171179 1.0 ['ENSG00000112320|ENST00000317357|SOBP', 'ENST00000477448.1_1_6:107811820-107879187:+|nuORF', 'SOBP|p.I126Lfs*5|1|0.43|ENSG00000112320|chr6:107506379-107506379|C/-|frameshift_variant'] 120242 7073 VFPAAPGP True H1975_Epitope_Rep2 754.4013753462199 754.40026993586 32.135 2 -0.8282376313508066 0.2511065126171179 1.0 ['ENST00000252445.7_1_19:11664136-11664256:-|nuORF'] 93091 17998 RRRLLPGH True NCI_RA007_Epitope_Rep1 1003.6151651366299 1003.61406993586 74.146 2 -0.8282378073955419 0.2511065126171179 1.0 ['ENST00000433005.1_1_7:17338824-17338914:-|nuORF'] 130730 6037 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep1 1029.44371111445 1029.4426099358602 28.035 2 -0.8282412917103312 0.2511065126171179 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 68504 10860 LTVMNQYQSL True H1975_Epitope_Rep3 1195.59070932087 1195.5896099358602 46.855 2 -0.8282477412672268 0.2511065126171179 1.0 ['ENST00000552540.5_2_12:57107337-57108468:-|nuORF'] 64228 18528 LQKEWKETL True PC9_epitope_Rep6 1173.6393737654498 1173.63826993586 83.91 2 -0.8282562730668505 0.25111366575657423 1.0 ['ENSG00000173614|ENST00000377205|NMNAT1', 'NMNAT1|p.K97Rfs*3|1|0.24|ENSG00000173614|chr1:9975764-9975764|G/-|frameshift_variant'] 38866 7234 HIHTGTSH True PC9_epitope_Rep6 888.4202132978401 888.41910993586 36.941 2 -0.8282601837074726 0.25111366575657423 1.0 ['ENST00000253928.13_1_16:2998732-2998981:+|nuORF'] 57686 13792 LEMSSEAKATS True NCI_RA007_Epitope_Rep5 1152.5332540144 1152.53161490379 59.727 3 -0.828276035573091 0.25112797080208066 1.0 ['ENSG00000084090|ENST00000337288|STARD7'] 105988 8876 SVLKQRISEE True H1975_Epitope_Rep3 1187.6510010783102 1187.64990993586 39.142 2 -0.828303393246494 0.25112797080208066 1.0 ['ENST00000502859.1_1_1:50307995-50310583:+|nuORF'] 40005 7901 HQSLKKKYR True NCI_RA007_Epitope_Rep1 1186.69347502698 1186.69183490379 34.726 3 -0.8283917187486037 0.25112797080208066 1.0 ['nc|ENSG00000181982|Q6ZUS6|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-5|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-4|CCDC149', 'ENSG00000181982|ENST00000635206|CCDC149', 'nc|ENSG00000181982|Q6ZUS6-3|CCDC149', 'ENST00000324309.8_1_4:24833126-24981729:-|nuORF', 'nc|ENSG00000181982|Q6ZUS6-2|CCDC149'] 138500 21267 YRIHRRGPKI True NCI_RA007_Epitope_Rep5 1294.7734566831798 1294.77181490379 88.848 3 -0.8283963329350927 0.25112797080208066 1.0 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2'] 22836 8557 EVEFEWLR True NCI_RA007_Epitope_Rep2 1106.53965972418 1106.53856993586 37.929 2 -0.8284371043195659 0.25116025116025115 1.0 ['ENSG00000140718|ENST00000471389|FTO'] 138587 10078 YRPQYGYWVIG True PC9_epitope_Rep1 1400.6877209401998 1400.68662993586 43.635 2 -0.8284409862895534 0.25116025116025115 1.0 ['nc|ENSG00000132274|Q8IYM9-2|TRIM22', 'ENSG00000132274|ENST00000379965|TRIM22'] 73722 7861 NGVDHRSYR True NCI_RA007_Epitope_Rep2 1102.5268036247 1102.52570993586 35.208 2 -0.8284624542580322 0.25116025116025115 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4'] 106498 13812 SVVLEKAKVV True PC9_epitope_Rep2 1070.66994561774 1070.6688499358602 58.411 2 -0.8285411194566094 0.2511817698530151 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 140051 27732 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 116.65 3 -0.8285470054634692 0.2511817698530151 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 127812 14981 VRLIHLRLK True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 62.776 3 -0.8285588133394824 0.2511925287356322 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 118958 13137 VEEVQNVI True PC9_epitope_Rep2 928.48656152216 928.48546993586 55.805 2 -0.8285813475171317 0.25119967817016753 1.0 ['nc|ENSG00000012048|P38398-6|BRCA1', 'nc|ENSG00000012048|P38398-5|BRCA1', 'nc|ENSG00000012048|P38398-3|BRCA1', 'BRCA1|p.E1257Gfs*9|1|0.28|ENSG00000012048|chr17:43091760-43091761|CT/-|frameshift_variant', 'ENSG00000012048|ENST00000357654|BRCA1', 'nc|ENSG00000012048|P38398-7|BRCA1', 'ENST00000493795.5_1_17:41276035-41277334:-|nuORF', 'nc|ENSG00000012048|P38398-2|BRCA1'] 6976 6858 AQPNVDKL True PC9_epitope_Rep4 883.4763311916299 883.4752299358599 33.598 2 -0.82858470182142 0.25119967817016753 1.0 ['nc|ENSG00000105953|Q02218-2|OGDH', 'ENSG00000105953|ENST00000222673|OGDH', 'nc|ENSG00000105953|Q02218-3|OGDH', 'OGDH|p.Q772Rfs*83|1|0.31|ENSG00000105953|chr7:44697736-44697736|G/-|frameshift_variant'] 65731 10887 LSHWKRSLF True PC9_epitope_Rep2 1172.6454622054 1172.6438249037901 47.194 3 -0.8286342064537556 0.2512139758066833 1.0 ['ENST00000369847.3_2_10:105086334-105104817:-|nuORF'] 93393 19793 RRWRKLYCA True H1975_Epitope_Rep2 1250.6818647974599 1250.68021490379 82.113 3 -0.8286786528515075 0.2512139758066833 1.0 ['ENSG00000163558|ENST00000295797|PRKCI'] 55303 20536 LARLTKEERLK True H1975_Epitope_Rep2 1355.8248831193498 1355.82322490379 85.078 3 -0.8286794610181605 0.2512139758066833 1.0 ['ENSG00000069535|ENST00000378069|MAOB', 'nc|ENSG00000069535|P27338-2|MAOB'] 138754 3477 YSCMLGKK True NCI_RA007_Epitope_Rep4 928.4510450439199 928.44994993586 19.32 2 -0.8286819745996719 0.2512139758066833 1.0 ['ENSG00000127804|ENST00000263092|METTL16', 'ENST00000574752.5_1_17:2340122-2367575:-|nuORF'] 11362 11987 DFEYSTQSY True H1975_Epitope_Rep1 1138.44548455582 1138.44497496793 51.115 1 -0.828744979106853 0.25123534819581705 1.0 ['ENST00000522063.1_1_8:27957393-27970048:+|nuORF', 'ENST00000521938.5_1_8:27950677-27967964:+|nuORF', 'nc|ENSG00000134014|Q9H9T3-5|ELP3', 'nc|ENSG00000134014|Q9H9T3-2|ELP3', 'ENSG00000134014|ENST00000256398|ELP3'] 139461 12315 YTFHFLYF True NCI_RA007_Epitope_Rep3 1136.5331177917599 1136.53202993586 55.616 2 -0.8287612941336112 0.25123534819581705 1.0 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000527772.1_1_11:33767599-33770353:-|nuORF'] 97606 14456 SHADVVNLL True PC9_epitope_Rep6 966.51344497634 966.51234993586 67.493 2 -0.8287774846432062 0.25123534819581705 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 85936 8352 QNYQRWREERF True PC9_epitope_Rep5 1610.7702217775397 1610.7685649037903 37.067 3 -0.8287860053261238 0.25123534819581705 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000513799.5_1_5:177019550-177022414:+|nuORF', 'ENST00000507723.1_1_5:177021070-177022414:+|nuORF'] 23303 12939 EVSNRFSGVP True PC9_epitope_Rep2 1090.5407223533398 1090.5396299358601 55.065 2 -0.828798949784041 0.25123534819581705 1.0 ['nc|ENSG00000243264|A0A075B6S2|IGKV2D-29', 'nc|ENSG00000211623|A0A0A0MRZ7|IGKV2D-26'] 126426 24565 VPLLPLTP True PC9_epitope_Rep5 848.53714054304 848.53604993586 99.604 2 -0.8288331690933741 0.25123534819581705 1.0 ['ENSG00000176715|ENST00000614302|ACSF3'] 37316 6266 GVVQIVEV True PC9_epitope_Rep2 841.4909186266099 841.48982993586 29.499 2 -0.8288547271944942 0.25123534819581705 1.0 ['nc|ENSG00000140832|Q96A59-2|MARVELD3'] 56563 14141 LDVSLSATG True PC9_epitope_Rep5 861.44436235701 861.44326993586 59.404 2 -0.828938845423823 0.25123534819581705 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-4|INPP5F'] 55036 17681 LALEAEIRTLK True PC9_epitope_Rep3 1255.74998684359 1255.74888993586 73.205 2 -0.8289817392380526 0.25123534819581705 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57', 'nc|ENSG00000176155|Q2TAC2-2|CCDC57'] 68730 5645 LVDGREALW True H1975_Epitope_Rep3 1057.55564414149 1057.5545499358602 26.744 2 -0.8290144022004723 0.25123534819581705 1.0 ['ENST00000538768.2_1_16:31138259-31142577:+|nuORF'] 20610 16357 EQERRRWQQRD True NCI_RA007_Epitope_Rep1 1585.7821834435697 1585.78108993586 67.737 2 -0.8290370372415103 0.25125685885834126 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 102074 5140 SPPRRARHGS True NCI_RA007_Epitope_Rep1 1119.6009716244698 1119.5998699358602 24.077 2 -0.8290850720692464 0.25125685885834126 1.0 ['ENSG00000137656|ENST00000260210|BUD13'] 22877 6725 EVETGLNR True NCI_RA007_Epitope_Rep5 916.4614094034799 916.46030993586 32.539 2 -0.8292292275037815 0.25130348601715 1.0 ['ENST00000475170.5_1_21:46313479-46313557:-|nuORF'] 44996 13452 IQKNRRVVL True PC9_epitope_Rep5 1124.71421047156 1124.71255490379 56.759 3 -0.8292626071954063 0.25130348601715 1.0 ['nc|ENSG00000172663|Q9H6X4-2|TMEM134', 'nc|ENSG00000172663|Q9H6X4-3|TMEM134', 'ENSG00000172663|ENST00000308022|TMEM134'] 60823 23756 LKKKKKKKKK True H1975_Epitope_Rep3 1283.94929578683 1283.9476649037902 99.071 3 -0.8292738657085583 0.25130348601715 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 41338 5580 IALIGSGW True NCI_RA007_Epitope_Rep5 815.45413919507 815.45304993586 28.15 2 -0.8292919188608874 0.2513142397518026 1.0 ['SS18L1-GPR108|1|fusion', 'ENSG00000125734|ENST00000264080|GPR108'] 5211 18419 ALPTCISHI True PC9_epitope_Rep5 953.50043776449 953.49934993586 75.87 2 -0.8293346243239975 0.2513501091577617 1.0 ['ENSG00000181961|ENST00000314721|OR4A16'] 95358 16546 SAHILGYLI True PC9_epitope_Rep2 985.5596668927699 985.55856993586 68.882 2 -0.8293572742656576 0.2513501091577617 1.0 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-3|IGFN1', 'nc|ENSG00000163395|Q86VF2-2|IGFN1'] 129949 18898 VTNEPPKGL True PC9_epitope_Rep3 953.5181960036099 953.51708993586 77.914 2 -0.8293867472340684 0.25137161405222186 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-2|DNAH6'] 98731 18926 SIRRVYTRL True NCI_RA007_Epitope_Rep5 1162.69347502698 1162.69183490379 79.637 3 -0.8294103497613678 0.25137161405222186 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 119338 13339 VEMEDWEGNLR True H1975_Epitope_Rep2 1376.6030649097197 1376.60140490379 56.44 3 -0.82944483831409 0.2513931177112656 1.0 ['ENSG00000171819|ENST00000376819|ANGPTL7'] 20359 10168 EPHIREMKIYI True PC9_epitope_Rep2 1427.75950598147 1427.75785490379 44.448 3 -0.8294675999648646 0.2513931177112656 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H', 'SUPT16H|p.T612Dfs*15|1|0.34|ENSG00000092201|chr14:21361174-21361175|-/T|frameshift_variant'] 65635 15709 LSGQKLFIP True PC9_epitope_Rep2 1001.5909670210498 1001.58986993586 65.699 2 -0.8295445831175804 0.2514289817607353 1.0 ['ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11', 'PSG3|p.Q373L|1|0.22|ENSG00000221826|chr19:42729248-42729248|T/A|missense_variant', 'nc|ENSG00000243130|Q9UQ72-2|PSG11', 'ENST00000599753.1_2_19:43406566-43412082:-|nuORF', 'nc|ENSG00000124467|Q9UQ74-2|PSG8', 'nc|ENSG00000124467|Q9UQ74-3|PSG8', 'ENSG00000124467|ENST00000306511|PSG8', 'ENSG00000221826|ENST00000327495|PSG3', 'nc|ENSG00000170848|Q00889|PSG6', 'ENSG00000170848|ENST00000187910|PSG6'] 18130 13309 EIMEKNFDYLR True H1975_Epitope_Rep1 1456.7020506749998 1456.70094993586 56.297 2 -0.8295544350057872 0.2514289817607353 1.0 ['TMEM126B|p.I57M|1|0.11|ENSG00000171204|chr11:85631776-85631776|A/G|missense_variant'] 116569 13966 TYGEIFEKF True NCI_RA007_Epitope_Rep2 1132.54407639828 1132.5429699358601 58.981 2 -0.8295958752320481 0.2514397323031408 1.0 ['nc|ENSG00000151366|O95298-2|NDUFC2', 'ENSG00000151366|ENST00000281031|NDUFC2'] 11014 1813 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 9.8661 2 -0.8296043610218329 0.2514792049632353 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 85857 10447 QNFFLQEF True PC9_epitope_Rep3 1071.5025459394699 1071.5014499358601 45.121 2 -0.8296275342487827 0.25148634287847893 1.0 ['ENST00000563441.5_1_15:75651254-75660924:-|nuORF', 'nc|ENSG00000140400|Q9NTJ4-3|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-2|MAN2C1', 'ENSG00000140400|ENST00000267978|MAN2C1', 'nc|ENSG00000140400|Q9NTJ4-4|MAN2C1', 'ENST00000563013.1_1_15:75653860-75654411:-|nuORF', 'ENST00000564785.5_1_15:75653860-75654842:-|nuORF', 'ENST00000563058.5_1_15:75653361-75654692:-|nuORF'] 15817 6027 EDKARVHR True H1975_Epitope_Rep3 1009.5417254128499 1009.54062993586 28.197 2 -0.8296286662975992 0.25148634287847893 1.0 ['ENSG00000196700|ENST00000369888|ZNF512B'] 13521 12565 DPGQLLLHSQH True PC9_epitope_Rep5 1243.63093434007 1243.62982993586 53.332 2 -0.8296842878710838 0.25151127895122266 1.0 ['ENST00000377991.8_1_9:35853199-35853710:+|nuORF'] 71113 9408 METRKQLHLTR True PC9_epitope_Rep4 1411.7718020006698 1411.77016490379 43.796 3 -0.8297223563640366 0.25151127895122266 1.0 ['ENST00000304920.3_1_13:21296082-21296283:+|nuORF'] 19881 10877 ELVTQRKQD True NCI_RA007_Epitope_Rep2 1115.5934862021898 1115.5923899358602 46.916 2 -0.8297233167515731 0.25151127895122266 1.0 ['nc|ENSG00000105289|O95049-5|TJP3', 'ENSG00000105289|ENST00000541714|TJP3', 'nc|ENSG00000105289|O95049-4|TJP3', 'nc|ENSG00000105289|O95049-3|TJP3'] 118588 16565 VEAFLKQCM True H1975_Epitope_Rep2 1067.5143735764698 1067.51326993586 68.943 2 -0.8297267663458033 0.25151127895122266 1.0 ['ENSG00000144554|ENST00000675286|FANCD2', 'nc|ENSG00000144554|Q9BXW9-1|FANCD2'] 119018 14985 VEFVWHRYLDY True PC9_epitope_Rep5 1525.73539940861 1525.73321987172 62.643 4 -0.8297281882117047 0.25151127895122266 1.0 ['MAGEE1|p.Q635H|1|0.3|ENSG00000198934|chrX:76429835-76429835|G/T|missense_variant'] 121564 21040 VGKRNARA True PC9_epitope_Rep4 870.5147823890198 870.5142349679301 89.09 1 -0.8297380513912618 0.25151127895122266 1.0 ['ENST00000405731.7_1_7:6618146-6618326:+|nuORF', 'ENST00000396707.6_1_7:6617123-6618326:+|nuORF'] 121345 8399 VGHRQHQL True PC9_epitope_Rep3 973.52059604545 973.51948993586 37.272 2 -0.8297464569710773 0.25151127895122266 1.0 ['ENST00000261609.11_1_15:28465605-28465737:-|nuORF'] 60826 21985 LKKKKKKKKK True NCI_RA007_Epitope_Rep4 1283.94929578683 1283.9476649037902 95.336 3 -0.82975912246819 0.25151127895122266 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 65206 10026 LSDYYYHA True PC9_epitope_Rep4 1030.4396113297398 1030.43850993586 46.227 2 -0.8297651429388958 0.25151127895122266 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF', 'ENSG00000021762|ENST00000263650|OSBPL5', 'ENST00000534491.5_1_11:3114755-3187956:-|nuORF', 'nc|ENSG00000021762|Q9H0X9-3|OSBPL5', 'nc|ENSG00000021762|Q9H0X9-2|OSBPL5'] 134327 12642 WRWREWRPWVT True NCI_RA007_Epitope_Rep1 1656.84259887216 1656.8415099358601 53.155 2 -0.8297822731306422 0.25151480343451166 1.0 ['ENST00000589087.5_1_19:2806818-2807876:+|nuORF'] 85817 20678 QMDEMKQTI True PC9_epitope_Rep4 1122.50493109158 1122.50382993586 87.697 2 -0.8297917172808981 0.25151480343451166 1.0 ['nc|ENSG00000123240|Q96CV9-3|OPTN', 'nc|ENSG00000123240|Q96CV9-2|OPTN', 'ENSG00000123240|ENST00000378747|OPTN'] 129344 6182 VTDVIADR True H1975_Epitope_Rep3 887.4712458111899 887.47014993586 28.791 2 -0.8297992789085312 0.25151480343451166 1.0 ['ROBO1|p.G1375Afs*42|1|0.21|ENSG00000169855|chr3:78617793-78617793|C/-|frameshift_variant', 'nc|ENSG00000169855|Q9Y6N7-6|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-5|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-4|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-3|ROBO1', 'ENSG00000169855|ENST00000464233|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-2|ROBO1', 'ENST00000484514.1_1_3:78710132-78763649:-|nuORF'] 120356 12872 VFQTVKSL True PC9_epitope_Rep3 920.5331177917599 920.53202993586 54.53 2 -0.8299015929178984 0.2515362085797967 1.0 ['ENSG00000132670|ENST00000399903|PTPRA', 'nc|ENSG00000132670|P18433-6|PTPRA'] 139002 8587 YSGFQQYPQQY True H1975_Epitope_Rep1 1407.60953018915 1407.6084299358602 37.958 2 -0.8299305766979934 0.2515362085797967 1.0 ['nc|ENSG00000138802|O95487-2|SEC24B', 'ENSG00000138802|ENST00000265175|SEC24B'] 129933 4932 VTMLEKESCL True NCI_RA007_Epitope_Rep4 1151.55663231127 1151.55552993586 25.433 2 -0.8299350520530006 0.2515362085797967 1.0 ['ENST00000590054.5_1_19:11457292-11462950:+|nuORF', 'nc|ENSG00000183401|P0C7I6-7|CCDC159', 'ENSG00000183401|ENST00000458408|CCDC159', 'ENST00000592723.5_1_19:11460627-11464155:+|nuORF', 'nc|ENSG00000183401|P0C7I6-6|CCDC159', 'ENST00000589016.5_1_19:11457292-11461788:+|nuORF', 'nc|ENSG00000183401|P0C7I6-8|CCDC159', 'ENST00000588821.5_1_19:11457264-11461788:+|nuORF'] 122139 17107 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 72.572 1 -0.8299756462516553 0.2515362085797967 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 20239 11467 ENVRLAEETEK True NCI_RA007_Epitope_Rep1 1316.6572086575595 1316.65610993586 48.57 2 -0.8299759531033112 0.2515362085797967 1.0 ['ENSG00000163808|ENST00000326047|KIF15', 'nc|ENSG00000163808|Q9NS87-2|KIF15', 'nc|ENSG00000163808|Q9NS87-3|KIF15'] 18176 10495 EIQEDKVP True H1975_Epitope_Rep3 956.4814761417199 956.48036993586 45.432 2 -0.8300331835815467 0.2515362085797967 1.0 ['ENSG00000027644|ENST00000368195|INSRR'] 70710 17195 MDQYNHSSL True PC9_epitope_Rep1 1093.44985874361 1093.4487699358601 70.96 2 -0.8301069811946453 0.2515540880051683 1.0 ['OR6N2|p.R50Hfs*85|1|0.31|ENSG00000188340|chr1:158777487-158777487|C/-|frameshift_variant', 'OR6N2|p.A10S|1|0.16|ENSG00000188340|chr1:158777608-158777608|C/A|missense_variant', 'ENSG00000188340|ENST00000641131|OR6N2'] 111953 7189 TLSDIREGAP True H1975_Epitope_Rep2 1057.54038800017 1057.53928993586 32.587 2 -0.8301201285421291 0.2515540880051683 1.0 ['nc|ENSG00000104936|Q09013-12|DMPK', 'nc|ENSG00000104936|Q09013-10|DMPK', 'nc|ENSG00000104936|Q09013-11|DMPK', 'nc|ENSG00000104936|Q09013-15|DMPK', 'ENSG00000104936|ENST00000291270|DMPK', 'nc|ENSG00000104936|Q09013-16|DMPK', 'nc|ENSG00000104936|Q09013-2|DMPK', 'nc|ENSG00000104936|Q09013-8|DMPK', 'ENST00000596686.5_1_19:46273741-46282867:-|nuORF', 'nc|ENSG00000104936|Q09013-5|DMPK', 'nc|ENSG00000104936|Q09013-7|DMPK', 'nc|ENSG00000104936|Q09013-6|DMPK', 'nc|ENSG00000104936|Q09013-1|DMPK'] 136860 16572 YIWFIIFFIQP True PC9_epitope_Rep5 1485.8060451677297 1485.80440490379 68.748 3 -0.830137843070822 0.2515540880051683 1.0 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 23096 7134 EVLNKAGPNAS True PC9_epitope_Rep2 1098.5669371011797 1098.5658499358601 32.835 2 -0.8301454197660516 0.25156122141349757 1.0 ['ENSG00000135372|ENST00000257829|NAT10', 'nc|ENSG00000135372|Q9H0A0-2|NAT10'] 46686 7867 ITVWVFLHLFF True PC9_epitope_Rep3 1420.7907294567597 1420.78909490379 35.246 3 -0.8301483284710369 0.25156122141349757 1.0 ['HAL1M8_dup1066|chr8:143743399-143743515:-|1.8390974932074844|0.3402307778492503|2.43|501.0|8|3|anti-sense'] 112061 13730 TLTFNEDFKIF True H1975_Epitope_Rep1 1373.68671788069 1373.68562993586 57.951 2 -0.8302227179658848 0.2516150334491372 1.0 ['nc|ENSG00000162627|Q9UNH6-2|SNX7', 'nc|ENSG00000162627|Q9UNH6|SNX7', 'ENSG00000162627|ENST00000306121|SNX7'] 14172 8301 DSPAVAAVVP True H1975_Epitope_Rep1 924.4916469025999 924.49109496793 36.861 1 -0.8302961570002201 0.2516543932934269 1.0 ['ENST00000358729.8_1_1:110163725-110168306:+|nuORF'] 104280 13351 SSEEDYGEFEF True H1975_Epitope_Rep2 1337.4935569470497 1337.4924499358601 56.487 2 -0.8303017192447681 0.2516543932934269 1.0 ['CON__Q28107'] 23259 14266 EVRLPPPPD True PC9_epitope_Rep1 1018.5447451046199 1018.54364993586 59.698 2 -0.8303101574965893 0.2516543932934269 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'ENST00000479176.5_1_3:180630473-180665760:+|nuORF', 'FXR1|p.N124Kfs*5|1|0.21|ENSG00000114416|chr3:180948439-180948440|-/A|frameshift_variant'] 36999 19099 GVRRTRRRGK True NCI_RA007_Epitope_Rep4 1240.77010263824 1240.7690099358601 82.612 2 -0.8303328284672343 0.2516543932934269 1.0 ['ENST00000324771.12_1_6:30867402-30867627:+|nuORF'] 85276 12287 QKRRRRVHHQR True H1975_Epitope_Rep1 1555.9144754561498 1555.9128149037901 52.286 3 -0.8303424845062175 0.2516543932934269 1.0 ['ENST00000300591.10_1_18:44118269-44121845:-|nuORF'] 136137 6559 YGGLRGAI True PC9_epitope_Rep2 805.4446371405298 805.44354993586 30.641 2 -0.8303574544172911 0.2516722648063618 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 17016 8652 EGLPCMLSTL True PC9_epitope_Rep6 1062.5089538428601 1062.5078499358601 43.108 2 -0.8303582212689854 0.2516722648063618 1.0 ['ENST00000536587.5_1_11:95546139-95548377:+|nuORF'] 66639 14365 LSSRLRLDPV True H1975_Epitope_Rep1 1154.6771562565 1154.6760499358602 60.448 2 -0.8304168019473951 0.2516722648063618 1.0 ['ENSG00000158008|ENST00000374280|EXTL1'] 56821 12907 LECHLWHIL True PC9_epitope_Rep6 1162.59573513166 1162.5940949037902 61.179 3 -0.8304344712872461 0.25167939369581444 1.0 ['CMTR2|p.S551Ffs*2|1|0.14|ENSG00000180917|chr16:71284269-71284270|-/A|frameshift_variant', 'ENSG00000180917|ENST00000434935|CMTR2'] 107333 5518 SYRIYWYQQKP True NCI_RA007_Epitope_Rep1 1530.7619485096197 1530.75973987172 25.535 4 -0.8304379927105923 0.25167939369581444 1.0 ['nc|ENSG00000211647|A0A075B6I7|IGLV5-48'] 111109 6037 TLEKFQQEK True NCI_RA007_Epitope_Rep2 1149.60298825673 1149.60188993586 28.087 2 -0.830499014150702 0.2516865221759724 1.0 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 98974 9179 SKICWHDNR True NCI_RA007_Epitope_Rep2 1157.5400111606898 1157.5389099358601 40.313 2 -0.8305342673166805 0.2516865221759724 1.0 ['ENSG00000035681|ENST00000038176|NSMAF', 'nc|ENSG00000035681|Q92636-2|NSMAF', 'ENST00000517612.5_1_8:59498999-59503485:-|nuORF'] 69186 26602 LVMCIVLRP True PC9_epitope_Rep5 1042.6031290112198 1042.6020299358602 108.4 2 -0.8305713640174591 0.25170800321506487 1.0 ['ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 60562 8684 LIQSDVPIDLL True NCI_RA007_Epitope_Rep4 1224.6965542884 1224.69490490379 40.19 3 -0.8306109013804183 0.25170800321506487 1.0 ['nc|ENSG00000138686|Q8IWZ6-2|BBS7', 'ENSG00000138686|ENST00000264499|BBS7'] 33652 16434 GLPEKAQEVP True PC9_epitope_Rep2 1066.5658744720197 1066.56476993586 68.455 2 -0.8306620544493643 0.251729483020926 1.0 ['ENST00000430334.7_1_17:43514711-43515125:-|nuORF'] 140824 10332 YYSQQMAQRVK True NCI_RA007_Epitope_Rep2 1400.6870693171998 1400.6859699358602 44.78 2 -0.8306935553774513 0.251729483020926 1.0 ['ENSG00000183347|ENST00000370456|GBP6'] 20539 7913 EQAKAQLAV True H1975_Epitope_Rep2 956.5290950404799 956.52798993586 35.385 2 -0.8307055964409777 0.25174734847941216 1.0 ['PCF11|p.E277*|1|0.32|ENSG00000165494|chr11:83165724-83165725|-/T|frameshift_variant', 'PCF11|p.S1198Ffs*13|1|0.17|ENSG00000165494|chr11:83169928-83169928|C/-|frameshift_variant', 'nc|ENSG00000165494|O94913|PCF11', 'ENSG00000165494|ENST00000690938|PCF11'] 42831 15154 IFLFFFLYLCW True PC9_epitope_Rep4 1510.7723025112998 1510.77120993586 66.217 2 -0.8307210009470455 0.25174734847941216 1.0 ['chr7:50504059-50513259|115|12.32|0.0|20.23|-|1|TE_info:L1PB1,L1PB1_dup5738,L1,LINE,donor,+,50513259,50517927|DDC,None|63'] 72183 18403 MRQLVLFNII True NCI_RA007_Epitope_Rep3 1245.7267493012098 1245.72511490379 80.575 3 -0.8307276135478299 0.25174734847941216 1.0 ['ENST00000481603.1_1_11:5626782-5632007:+|nuORF'] 78150 7590 PAPLRAAPAA True PC9_epitope_Rep5 933.5396001545298 933.53850993586 34.145 2 -0.830763129528852 0.2517688256146041 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 45334 11736 ISDARSDLL True PC9_epitope_Rep3 988.5189242796 988.51782993586 50.161 2 -0.8307687310320915 0.2517688256146041 1.0 ['nc|ENSG00000132970|Q9UPY6-2|WASF3', 'ENSG00000132970|ENST00000335327|WASF3'] 37841 20160 HDLRFVRL True PC9_epitope_Rep3 1054.60359739342 1054.60250993586 82.799 2 -0.8308274038837856 0.2517795637198622 1.0 ['nc|ENSG00000159403|P00736|C1R', 'ENSG00000159403|ENST00000647956|C1R'] 21956 8966 ESLIAVFQKY True H1975_Epitope_Rep1 1196.6441247927198 1196.64302993586 39.392 2 -0.830902446375649 0.25181900374564087 1.0 ['ENSG00000163191|ENST00000271638|S100A11', 'ENST00000478109.1_1_1:152005140-152020324:-|nuORF'] 112997 7038 TPSQNRYVGYF True H1975_Epitope_Rep1 1330.6305999868998 1330.6295099358601 32.104 2 -0.8309142417021557 0.2518297408225941 1.0 ['nc|ENSG00000132958|Q6XPS3-6|TPTE2', 'nc|ENSG00000132958|Q6XPS3-4|TPTE2', 'nc|ENSG00000132958|Q6XPS3-5|TPTE2', 'nc|ENSG00000132958|Q6XPS3-3|TPTE2', 'nc|ENSG00000132958|Q6XPS3-2|TPTE2', 'nc|ENSG00000132958|Q6XPS3-7|TPTE2', 'ENSG00000132958|ENST00000697147|TPTE2'] 65883 5263 LSLDDAVTDP True NCI_RA007_Epitope_Rep2 1044.49752012868 1044.49642993586 25.094 2 -0.8309392262580674 0.2518404775913781 1.0 ['ENST00000372699.7_1_1:40997363-40998823:+|nuORF'] 133191 22331 WDYRERRKFFP True PC9_epitope_Rep1 1598.8106300375393 1598.8095299358602 90.71 2 -0.8309930816668687 0.2518512140520062 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5'] 118602 6505 VEAIRKNPPK True H1975_Epitope_Rep3 1150.6822416369398 1150.68114993586 29.991 2 -0.831135330740976 0.2518906507856784 1.0 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1', 'ENST00000498520.1_1_2:206992517-206997685:-|nuORF'] 112620 23201 TPDRIRFP True PC9_epitope_Rep1 1000.5454138109599 1000.54430993586 94.039 2 -0.8311970719920633 0.25190489173327213 1.0 ['nc|ENSG00000075413|P27448-8|MARK3', 'nc|ENSG00000075413|P27448-6|MARK3', 'nc|ENSG00000075413|P27448-3|MARK3', 'nc|ENSG00000075413|P27448-4|MARK3', 'nc|ENSG00000075413|P27448-2|MARK3', 'ENSG00000075413|ENST00000429436|MARK3', 'nc|ENSG00000075413|P27448-7|MARK3', 'MARK3-TDRD9|3|fusion', 'MARK3-TDRD9|2|fusion', 'MARK3-TDRD9|1|fusion', 'RAD51B-MARK3|2|fusion', 'RAD51B-MARK3|4|fusion', 'RAD51B-MARK3|1|fusion', 'RAD51B-MARK3|3|fusion'] 78403 4766 PAVVDHRG True NCI_RA007_Epitope_Rep4 849.44569976969 849.44460993586 24.765 2 -0.8312139149437235 0.25190489173327213 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A'] 100702 13310 SLRELNTVP True PC9_epitope_Rep1 1027.56620882519 1027.5651099358602 56.059 2 -0.8312695481800265 0.25190489173327213 1.0 ['nc|ENSG00000082512|O00463-3|TRAF5', 'ENSG00000082512|ENST00000261464|TRAF5', 'nc|ENSG00000082512|O00463-2|TRAF5', 'ENST00000462410.5_1_1:211526581-211529879:+|nuORF'] 82717 18232 PVPRWLLLLP True PC9_epitope_Rep1 1202.7539500252199 1202.75230490379 74.92 3 -0.8312870242033181 0.25190489173327213 1.0 ['ENST00000573823.5_1_17:55055520-55064652:+|nuORF', 'ENST00000571345.5_1_17:55055520-55072276:+|nuORF', 'ENST00000571898.5_1_17:55055520-55072831:+|nuORF', 'nc|ENSG00000121064|Q9HB40-2|SCPEP1', 'SCPEP1|p.L370Sfs*24|1|0.2|ENSG00000121064|chr17:57000967-57000968|-/T|frameshift_variant', 'ENSG00000121064|ENST00000262288|SCPEP1'] 64500 11987 LQYLERLYMKR True H1975_Epitope_Rep3 1511.8282542476297 1511.82714993586 51.265 2 -0.8312963980408657 0.2519156263452432 1.0 ['ENST00000560213.1_1_15:99796138-99796378:+|nuORF', 'ENST00000558500.5_1_15:99796138-99837514:+|nuORF', 'nc|ENSG00000168904|Q86X40-2|LRRC28', 'LRRC28|p.A339Qfs*28|1|0.26|ENSG00000168904|chr15:99363248-99363248|G/-|frameshift_variant', 'ENSG00000168904|ENST00000301981|LRRC28'] 100007 6408 SLITVSAAK True PC9_epitope_Rep2 888.5280324113199 888.52692993586 30.056 2 -0.8313897710870104 0.25192274579578716 1.0 ['ENST00000474863.5_1_1:222885158-222885545:-|nuORF'] 52264 8781 KNNLEETAFDI True PC9_epitope_Rep5 1292.62484590012 1292.6237499358601 38.718 2 -0.8313935243150339 0.25192274579578716 1.0 ['ENSG00000168876|ENST00000544612|ANKRD49'] 64283 13574 LQLRELVNCRW True H1975_Epitope_Rep1 1428.76598834424 1428.76488993586 57.34 2 -0.8314068114304688 0.25194782833283114 1.0 ['ENSG00000108395|ENST00000262294|TRIM37', 'nc|ENSG00000108395|O94972-3|TRIM37'] 40942 13183 HWFYTRWKDWE True H1975_Epitope_Rep1 1652.7524464550795 1652.7513499358602 55.804 2 -0.8315086765673902 0.25198725858753984 1.0 ['ENSG00000019995|ENST00000359653|ZRANB1'] 13836 20974 DQYKLYSK True PC9_epitope_Rep1 1043.52876068731 1043.52766993586 85.502 2 -0.8315465120954914 0.2520230716253444 1.0 ['nc|ENSG00000183454|Q12879-2|GRIN2A', 'ENSG00000183454|ENST00000330684|GRIN2A'] 45665 12740 ISIYNSTRDLL True PC9_epitope_Rep1 1293.69286589029 1293.69121490379 53.88 3 -0.8315478710861544 0.2520230716253444 1.0 ['nc|ENSG00000092969|P61812-2|TGFB2', 'ENSG00000092969|ENST00000366930|TGFB2', 'TGFB2|p.V189Afs*14|1|0.17|ENSG00000092969|chr1:218434137-218434141|TTGTG/C|frameshift_variant', 'TGFB2|p.N274Tfs*10|1|0.14|ENSG00000092969|chr1:218436029-218436029|A/-|frameshift_variant', 'TGFB2|p.N274Kfs*19|1|0.28|ENSG00000092969|chr1:218436028-218436029|-/A|frameshift_variant'] 127886 15845 VRPGHGKG True NCI_RA007_Epitope_Rep2 806.4511195033 806.45002993586 66.348 2 -0.831569386898449 0.25203018737983873 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 130388 6411 VTVLNTSVA True PC9_epitope_Rep5 902.50729696674 902.50618993586 29.637 2 -0.8315755463278809 0.25203018737983873 1.0 ['ENSG00000184954|ENST00000327335|OR6C70'] 129936 15764 VTMPNVARQTL True PC9_epitope_Rep6 1228.6597919401997 1228.6581449037901 72.877 3 -0.8315972790500505 0.2520336867476794 1.0 ['ENSG00000149256|ENST00000278550|TENM4'] 134966 12376 YAFWGAASF True PC9_epitope_Rep1 1018.4548674710599 1018.45376993586 52.463 2 -0.8316066512204032 0.2520336867476794 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 44286 17401 ILVYELLTG True PC9_epitope_Rep4 1019.5902983147099 1019.58920993586 74.928 2 -0.8316310969375674 0.2520336867476794 1.0 ['nc|ENSG00000138669|Q13237-2|PRKG2', 'ENSG00000138669|ENST00000264399|PRKG2'] 25307 13907 FEELC[Carbamidomethyl]SDLFR True NCI_RA007_Epitope_Rep2 1314.5914378762898 1314.59034993586 58.749 2 -0.8316442314762953 0.25203718581430046 1.0 ['HSPA6|p.K425Sfs*27|1|0.23|ENSG00000173110|chr1:161525929-161525929|C/-|frameshift_variant', 'ENSG00000173110|ENST00000309758|HSPA6', 'nc|ENSG00000225217|P48741|HSPA7', 'ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A'] 62427 12742 LLSDPALNL True NCI_RA007_Epitope_Rep4 954.53859709502 954.53750993586 56.07 2 -0.8317029709448951 0.25203718581430046 1.0 ['ENSG00000183196|ENST00000332272|CHST6', 'ENSG00000135702|ENST00000336257|CHST5', 'nc|ENSG00000135702|Q9GZS9-2|CHST5'] 33526 7119 GLHVGILK True NCI_RA007_Epitope_Rep2 835.52797284167 835.52686993586 32.313 2 -0.8317050444286678 0.25203718581430046 1.0 ['PNPLA8|p.I81V|3|0.39|ENSG00000135241|chr7:108515251-108515251|T/C|missense_variant'] 36806 2815 GVPPPAFEWYK True NCI_RA007_Epitope_Rep5 1289.64445914589 1289.64280490379 15.686 3 -0.8317929315783138 0.2520692573625396 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 58815 12686 LFQNITLE True PC9_epitope_Rep3 976.52294703088 976.52184993586 53.82 2 -0.8318254551924733 0.2520692573625396 1.0 ['ENSG00000105352|ENST00000221954|CEACAM4', 'ENST00000472081.1_1_19:42131969-42133331:-|nuORF'] 22119 11824 ESWSLLADP True H1975_Epitope_Rep2 1016.4814761417199 1016.48036993586 50.557 2 -0.831855970385861 0.2520692573625396 1.0 ['ENST00000500148.6_1_5:80535063-80546553:-|nuORF'] 45695 14600 ISLGLRNEI True PC9_epitope_Rep5 1013.58694426977 1013.58584993586 61.16 2 -0.8319264581493108 0.2520692573625396 1.0 ['ENST00000265689.8_1_11:67821205-67821301:-|nuORF'] 54799 10427 LAEYSIQPFF True NCI_RA007_Epitope_Rep2 1213.6019256275697 1213.60082993586 45.15 2 -0.8319275590363534 0.2520692573625396 1.0 ['SLC7A13|p.P125Sfs*10|1|0.23|ENSG00000164893|chr8:86229905-86229906|-/A|frameshift_variant', 'nc|ENSG00000164893|Q8TCU3-2|SLC7A13', 'ENSG00000164893|ENST00000297524|SLC7A13'] 56039 17502 LDKNNDLL True PC9_epitope_Rep6 943.49746055903 943.49636993586 79.952 2 -0.8319279558570983 0.2520692573625396 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 83618 11349 QDVIPDSQAA True PC9_epitope_Rep2 1042.49310345458 1042.49200993586 48.977 2 -0.8319372183483777 0.2520692573625396 1.0 ['ENSG00000196074|ENST00000357552|SYCP2'] 98134 13314 SICCPHPSF True PC9_epitope_Rep2 989.40990850793 989.40880993586 56.487 2 -0.8320317141028243 0.2521192822410603 1.0 ['ENST00000391959.5_2_1:202549704-202549908:+|nuORF'] 83157 7826 PYSIMRSV True PC9_epitope_Rep5 951.48478770035 951.48368993586 35.046 2 -0.8320533520912907 0.2521192822410603 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 60259 1791 LIEATVIALTK True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 9.4757 3 -0.832173943457569 0.2521192822410603 1.0 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 69153 18877 LVLQRVLPS True PC9_epitope_Rep3 1023.6440652230699 1023.6429699358599 77.834 2 -0.8322107910453487 0.2521192822410603 1.0 ['ENST00000306353.7_2_2:85828206-85829758:-|nuORF', 'ENST00000425160.1_1_2:85828206-85828698:-|nuORF'] 99166 17938 SLAQRWQP True PC9_epitope_Rep2 984.5141136826799 984.5130099358599 74.303 2 -0.8322433586464862 0.2521192822410603 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1'] 135942 14933 YEWWFRWRLDR True PC9_epitope_Rep1 1711.8371791385496 1711.8360899358602 62.263 2 -0.8322817890535921 0.2521192822410603 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 55871 21104 LDFQKQPVP True PC9_epitope_Rep1 1070.5760452329 1070.57494993586 86.004 2 -0.8323036045203179 0.2521263930922704 1.0 ['nc|ENSG00000143190|P14859-4|POU2F1', 'nc|ENSG00000143190|P14859-5|POU2F1', 'nc|ENSG00000143190|P14859-3|POU2F1', 'nc|ENSG00000143190|P14859|POU2F1', 'nc|ENSG00000143190|P14859-2|POU2F1', 'ENSG00000143190|ENST00000367866|POU2F1', 'ENST00000560232.6_1_1:167301714-167356435:+|nuORF', 'ENST00000470928.3_1_1:167334720-167353117:+|nuORF'] 49126 23060 KGFWIHWKLKE True PC9_epitope_Rep4 1470.81359015966 1470.8124899358602 96.923 2 -0.8323633317300897 0.2521263930922704 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B', 'ENSG00000166262|ENST00000299338|FAM227B'] 87785 14988 QVHYSLGNF True PC9_epitope_Rep4 1063.50869394907 1063.50758993586 65.591 2 -0.832381116403339 0.2521514629948365 1.0 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1-3|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15'] 78595 16690 PDSFNIPGSS True PC9_epitope_Rep1 1019.45598966987 1019.45488993586 69.025 2 -0.8324254575628999 0.2521765321782533 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 69896 15357 LYDACPKSLR True PC9_epitope_Rep1 1164.59612905448 1164.59449490379 63.888 3 -0.8325154928953535 0.25220160064255187 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 65724 8805 LSHSPLPAHLQ True NCI_RA007_Epitope_Rep4 1198.64585612822 1198.64474993586 40.679 2 -0.8325255340086184 0.25221232591827664 1.0 ['ENSG00000157741|ENST00000473989|UBN2', 'ENST00000609762.1_1_7:138978594-138982579:+|nuORF'] 108697 9998 TELYDYYYYED True PC9_epitope_Rep3 1535.59802201559 1535.59692993586 43.412 2 -0.8325888596320472 0.2522517354139177 1.0 ['nc|ENSG00000171502|Q17RW2-2|COL24A1', 'ENSG00000171502|ENST00000370571|COL24A1'] 25030 5835 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 29.309 2 -0.8325971766218955 0.2522587121755342 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 5060 9949 ALLLEQASPP True NCI_RA007_Epitope_Rep5 1037.5757108797297 1037.57460993586 44.91 2 -0.8326178175031548 0.2522587121755342 1.0 ['ENST00000503007.5_1_5:79364367-79378199:-|nuORF'] 58328 8387 LETRTYEQGP True H1975_Epitope_Rep1 1192.5724164044398 1192.5713099358602 37.188 2 -0.8326328960410427 0.2522587121755342 1.0 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000525415.1_1_1:110168821-110169689:+|nuORF'] 56270 10683 LDQKIVDF True PC9_epitope_Rep6 976.5229470308799 976.52184993586 51.907 2 -0.8326732300331195 0.2522587121755342 1.0 ['ENST00000272645.8_1_2:128605232-128605382:-|nuORF'] 18761 8388 ELDPQHLWWEW True H1975_Epitope_Rep2 1537.69901389989 1537.6973549037903 37.217 3 -0.832678616402152 0.2522587121755342 1.0 ['ENSG00000184908|ENST00000375679|CLCNKB', 'nc|ENSG00000184908|P51801-2|CLCNKB', 'nc|ENSG00000186510|P51800-2|CLCNKA', 'nc|ENSG00000186510|P51800-3|CLCNKA', 'ENSG00000186510|ENST00000331433|CLCNKA'] 110904 7331 TLANHMEA True H1975_Epitope_Rep3 885.4014519992099 885.40034993586 33.173 2 -0.8326821759808612 0.2522587121755342 1.0 ['nc|ENSG00000078295|Q08462-2|ADCY2', 'ADCY2|p.G942Wfs*61|2|0.3|ENSG00000078295|chr5:7804630-7804631|-/T|frameshift_variant', 'ENSG00000078295|ENST00000338316|ADCY2', 'ENST00000545213.5_1_14:24798022-24799232:-|nuORF', 'ENST00000557056.5_1_14:24792528-24800258:-|nuORF', 'nc|ENSG00000129467|Q8NFM4-2|ADCY4', 'ADCY2|p.Y497*|1|0.51|ENSG00000078295|chr5:7709300-7709303|CTTG/-|frameshift_variant', 'ENSG00000129467|ENST00000418030|ADCY4', 'ENSG00000173175|ENST00000462833|ADCY5', 'nc|ENSG00000173175|O95622-2|ADCY5', 'ADCY5|p.P819Hfs*14|1|0.34|ENSG00000173175|chr3:123304170-123304170|G/-|frameshift_variant', 'nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6', 'ENST00000552090.1_1_12:49167835-49170266:-|nuORF', 'ENST00000554577.5_1_14:24791640-24799178:-|nuORF'] 2576 4612 AERYYNELR True H1975_Epitope_Rep3 1212.58873517492 1212.5870849037901 22.862 3 -0.8327301089694138 0.2522656877366066 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 100261 9840 SLLREHSI True PC9_epitope_Rep1 953.5294293936499 953.52832993586 42.711 2 -0.8327386554421461 0.2522656877366066 1.0 ['nc|ENSG00000184182|Q969M7-3|UBE2F', 'ENST00000417231.5_1_2:238882367-238949976:+|nuORF', 'nc|ENSG00000184182|Q969M7-7|UBE2F', 'nc|ENSG00000184182|Q969M7-6|UBE2F', 'ENSG00000184182|ENST00000272930|UBE2F', 'nc|ENSG00000184182|Q969M7-2|UBE2F', 'ENST00000482096.1_1_2:238933991-238940949:+|nuORF', 'ENST00000449891.5_1_2:238903425-238973015:+|nuORF', 'ENST00000480828.5_1_2:238933952-238949976:+|nuORF'] 69708 13280 LVYVPSASLF True NCI_RA007_Epitope_Rep4 1094.60119735158 1094.60010993586 58.218 2 -0.832740161305442 0.2522656877366066 1.0 ['nc|ENSG00000165891|Q96AV8-2|E2F7', 'nc|ENSG00000165891|Q96AV8-3|E2F7', 'ENSG00000165891|ENST00000322886|E2F7'] 134249 24649 WRRRQRWRR True NCI_RA007_Epitope_Rep5 1454.8344342302998 1454.83332993586 102.3 2 -0.8327583472246148 0.2522656877366066 1.0 ['ENST00000372724.5_1_10:76586363-76598485:+|nuORF'] 134266 23640 WRRRRRSISR True PC9_epitope_Rep4 1427.8446645608299 1427.8435699358602 99.274 2 -0.832758493801063 0.2522656877366066 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5'] 126055 4948 VPASHPSP True NCI_RA007_Epitope_Rep5 790.39735259494 790.3962499358599 25.733 2 -0.8327587947930449 0.2522656877366066 1.0 ['ENST00000371712.3_1_9:139333928-139334213:-|nuORF'] 130736 4936 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep6 1029.44371111445 1029.4426099358602 26.554 2 -0.8327803111057857 0.2522764099402039 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 119950 7009 VEYKFYDLP True H1975_Epitope_Rep3 1172.5753765265597 1172.57426993586 31.924 2 -0.8328068301904051 0.2522871318363016 1.0 ['nc|ENSG00000092200|Q96KN7-3|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-2|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-5|RPGRIP1', 'ENSG00000092200|ENST00000400017|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-4|RPGRIP1'] 25919 7024 FGNECLNKMHQ True PC9_epitope_Rep3 1319.5750763400702 1319.57344490379 32.028 3 -0.8328556894479959 0.25230120723769106 1.0 ['ENSG00000176108|ENST00000325167|CHMP6'] 11012 1317 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 7.1608 2 -0.832858268137651 0.25230120723769106 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 67840 18061 LTIRKRYKERY True NCI_RA007_Epitope_Rep2 1524.88888035824 1524.8877899358602 75.008 2 -0.8328723481352394 0.25230120723769106 1.0 ['ENST00000507278.5_1_4:169086345-169108582:+|nuORF', 'ENSG00000109511|ENST00000359299|ANXA10'] 73651 17844 NGKRVRGRQ True NCI_RA007_Epitope_Rep4 1069.6217070690498 1069.62060993586 77.26 2 -0.832880521268896 0.25230120723769106 1.0 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7'] 42349 11419 IELREREIELL True PC9_epitope_Rep1 1411.80347896843 1411.80184490379 48.8 3 -0.8329129010233675 0.25230120723769106 1.0 ['CEP135|p.R243L|1|0.26|ENSG00000174799|chr4:55964302-55964302|G/T|missense_variant'] 19633 19954 ELRRFRKRP True PC9_epitope_Rep3 1256.75780661904 1256.75670993586 81.996 2 -0.8329212818184147 0.25230120723769106 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 55152 10678 LANFWHELHFV True H1975_Epitope_Rep3 1411.70370535751 1411.7026099358602 46.147 2 -0.8329366016390319 0.25230120723769106 1.0 ['nc|ENSG00000161791|Q8IVF7-2|FMNL3', 'ENSG00000161791|ENST00000335154|FMNL3', 'nc|ENSG00000161791|Q8IVF7|FMNL3', 'ENST00000549137.1_1_12:50039600-50046016:-|nuORF'] 36803 2970 GVPPPAFEWYK True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 15.112 3 -0.8329393399988678 0.25230120723769106 1.0 ['nc|ENSG00000172260|Q7Z3B1-2|NEGR1', 'ENSG00000172260|ENST00000357731|NEGR1'] 74210 4682 NIDLQPGSSD True NCI_RA007_Epitope_Rep4 1044.47236801 1044.4712699358602 24.43 2 -0.8329855986022202 0.25231541218637993 1.0 ['ENSG00000171840|ENST00000305108|NINJ2'] 129915 17242 VTLTSIVP True PC9_epitope_Rep3 828.49566965388 828.49456993586 71.473 2 -0.8330322800751255 0.25231541218637993 1.0 ['ENSG00000165912|ENST00000298838|PACSIN3'] 3680 5148 AGRRWGQARP True NCI_RA007_Epitope_Rep4 1153.6217070690495 1153.62007490379 26.325 3 -0.8330453859970811 0.25231541218637993 1.0 ['ENST00000573951.1_1_16:3313772-3314576:+|nuORF'] 60582 11315 LIRTRSTA True NCI_RA007_Epitope_Rep3 916.54541381096 916.54430993586 51.618 2 -0.8330702388362281 0.25231541218637993 1.0 ['ENSG00000154415|ENST00000284601|PPP1R3A'] 28693 16252 FSTKVPTF True NCI_RA007_Epitope_Rep3 925.4909186266099 925.48982993586 71.615 2 -0.8330996035559874 0.25232251404977635 1.0 ['nc|ENSG00000173662|Q7RTX1-2|TAS1R1', 'TAS1R1|p.C745Lfs*6|1|0.08|ENSG00000173662|chr1:6579288-6579289|-/C|frameshift_variant', 'ENSG00000173662|ENST00000333172|TAS1R1'] 60258 1727 LIEATVIALTK True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 9.1401 3 -0.8331123989725174 0.25232251404977635 1.0 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 35886 11134 GVAEVRGCL True PC9_epitope_Rep1 902.4643866089399 902.46328993586 47.711 2 -0.8331346828553537 0.2523439516013419 1.0 ['ENST00000454075.7_1_12:57501969-57504947:-|nuORF'] 74492 12409 NKLTYWYHL True PC9_epitope_Rep5 1236.62914343492 1236.6274949037902 52.73 3 -0.8331454075891079 0.2523439516013419 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|111|2|sense'] 110982 12339 TLDDIFEQW True PC9_epitope_Rep6 1165.52915461013 1165.52749490379 58.864 3 -0.8332207810275795 0.2523617701449317 1.0 ['ENSG00000132906|ENST00000333868|CASP9', 'nc|ENSG00000132906|P55211-4|CASP9', 'nc|ENSG00000132906|P55211-2|CASP9'] 126224 8198 VPGTWRDGVRV True H1975_Epitope_Rep3 1240.66765420196 1240.66654993586 36.515 2 -0.8332219822467256 0.2523617701449317 1.0 ['ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22'] 86891 19373 QRRRGQPLRRF True NCI_RA007_Epitope_Rep3 1468.8599802717997 1468.8583349037901 84.556 3 -0.8332441928678114 0.2523617701449317 1.0 ['ENST00000532226.1_1_6:111804740-111812267:+|nuORF', 'ENST00000420651.2_1_6:111804764-111824499:+|nuORF', 'ENST00000438298.6_1_6:111804755-111895827:+|nuORF', 'ENST00000532353.1_1_6:111804764-111919116:+|nuORF', 'ENST00000525151.5_1_6:111804740-111824521:+|nuORF'] 37519 19736 GYISSAFLF True NCI_RA007_Epitope_Rep1 1003.5014833103099 1003.50097496793 80.956 1 -0.833289708426869 0.25238682301671495 1.0 ['nc|ENSG00000131471|Q16853-2|AOC3', 'ENSG00000131471|ENST00000308423|AOC3'] 123365 11493 VIAGTALASV True PC9_epitope_Rep4 900.5280324113199 900.52692993586 51.969 2 -0.833299817396046 0.2523974026346344 1.0 ['ENSG00000089060|ENST00000680972|SLC8B1', 'nc|ENSG00000089060|Q6J4K2-2|SLC8B1', 'ENST00000553238.5_1_12:113745708-113770716:-|nuORF'] 125581 9579 VLYSVEEQR True PC9_epitope_Rep5 1121.57168812845 1121.5705899358602 41.807 2 -0.8333062375228328 0.2523974026346344 1.0 ['nc|ENSG00000125746|O95834-2|EML2', 'nc|ENSG00000125746|O95834-3|EML2', 'ENST00000587804.1_1_19:46136252-46137743:-|nuORF', 'ENSG00000125746|ENST00000245925|EML2', 'ENST00000588000.5_1_19:46124203-46142634:-|nuORF'] 60256 639 LIEATVIALTK True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 3.396 3 -0.8333126329957236 0.2523974026346344 1.0 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 80135 6007 PKKKKPLKLGP True PC9_epitope_Rep3 1232.8332629750798 1232.83216993586 28.158 2 -0.8333134480100233 0.2523974026346344 1.0 ['ENSG00000104332|ENST00000220772|SFRP1'] 29820 12185 FVVEDHILH True PC9_epitope_Rep6 1107.57129420563 1107.57018993586 58.23 2 -0.8333168910134378 0.2523974026346344 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B', 'nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6'] 21923 13405 ESGSYMCIYV True H1975_Epitope_Rep2 1150.4674829537 1150.46697496793 56.697 1 -0.8333565679335095 0.2524045008241955 1.0 ['SLCO1B1|p.W171C|2|0.09|ENSG00000134538|chr12:21178607-21178607|G/C|missense_variant'] 17141 9584 EGVKPFEC True PC9_epitope_Rep5 907.4109540537498 907.40984993586 41.826 2 -0.833364079575784 0.2524045008241955 1.0 ['ENSG00000066422|ENST00000312938|ZBTB11'] 15209 17397 EAFPKFTW True PC9_epitope_Rep4 1024.5018176634799 1024.5007299358601 74.912 2 -0.8334277618851447 0.2524725510993894 1.0 ['ACACB|p.G1821Afs*44|1|0.22|ENSG00000076555|chr12:109246337-109246337|G/-|frameshift_variant'] 132387 7063 VYNDSGEDFK True NCI_RA007_Epitope_Rep2 1172.4985827578396 1172.4974899358601 32.096 2 -0.8335092180543796 0.25247964682949203 1.0 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'ENST00000569930.1_1_16:2133412-2138608:+|nuORF'] 54026 8340 KYLQPKVNP True NCI_RA007_Epitope_Rep4 1085.62332977849 1085.62222993586 38.895 2 -0.8335135118935683 0.25247964682949203 1.0 ['ENST00000456324.5_1_19:36727248-36727317:+|nuORF'] 99634 16598 SLFSMLICL True PC9_epitope_Rep4 1025.5289610114498 1025.52786993586 71.819 2 -0.8335472910479346 0.2524867421527877 1.0 ['ENST00000564834.1_1_7:152162126-152162183:+|nuORF'] 3167 5968 AGEEPPAQPP True H1975_Epitope_Rep2 991.4610750503098 991.45996993586 27.938 2 -0.8335668222731352 0.2524867421527877 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 82438 11033 PVCSKAQWRL True PC9_epitope_Rep5 1186.6280978890998 1186.62646490379 47.428 3 -0.8336365987734524 0.25249383706931144 1.0 ['ENST00000503862.5_3_4:108746377-108829880:+|nuORF'] 85152 10475 QIVSFYFKLFK True H1975_Epitope_Rep3 1418.7962087600197 1418.7951099358602 45.355 2 -0.8336467298763415 0.25249383706931144 1.0 ['ENSG00000111537|ENST00000229135|IFNG'] 130246 8138 VTSQTTTNP True PC9_epitope_Rep3 947.4559896698701 947.45488993586 36.282 2 -0.8337857510236224 0.2525618792369541 1.0 ['ENST00000540801.5_1_17:27963734-27963779:-|nuORF'] 8938 10303 AVGPFSRHGLR True H1975_Epitope_Rep3 1195.65742387143 1195.6563299358602 44.684 2 -0.8338104641022088 0.25259401513414353 1.0 ['ENSG00000161179|ENST00000292778|YDJC'] 108191 6451 TDVVPEVESP True NCI_RA007_Epitope_Rep5 1070.5131701928199 1070.5120699358602 31.48 2 -0.8338308674754601 0.25259401513414353 1.0 ['nc|ENSG00000092203|O94842-2|TOX4', 'ENSG00000092203|ENST00000448790|TOX4', 'nc|ENSG00000092203|O94842-3|TOX4', 'CHD8-TOX4|1|fusion'] 120065 20004 VFFREFRF True NCI_RA007_Epitope_Rep4 1146.5974493838198 1146.5958149037901 86.511 3 -0.8338491681544348 0.25259401513414353 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ENST00000261834.9_1_14:96756535-96777546:-|nuORF'] 127888 15320 VRPGHGKG True NCI_RA007_Epitope_Rep5 806.4511195033 806.45002993586 65.627 2 -0.8339136094884676 0.2526190578557404 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 20869 2649 EQRKEYLKKKR True NCI_RA007_Epitope_Rep4 1504.8837949777997 1504.88161987172 14.814 4 -0.8339588924158103 0.2526440998595546 1.0 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 15008 11584 DYYDRQSLHRY True PC9_epitope_Rep4 1514.69024012134 1514.68914993586 52.317 2 -0.83399986386315 0.2526511894525652 1.0 ['ENSG00000091536|ENST00000647165|MYO15A'] 60183 5189 LHYQELKWRK True PC9_epitope_Rep6 1399.77245362367 1399.7707949037901 27.71 3 -0.8340775534796679 0.2526511894525652 1.0 ['ITIH2|p.V186L|1|0.27|ENSG00000151655|chr10:7717714-7717714|G/T|missense_variant'] 111151 17908 TLERWYVAP True PC9_epitope_Rep5 1133.58694426977 1133.58584993586 73.9 2 -0.8341520534509715 0.25271197856211397 1.0 ['ENSG00000136881|ENST00000259407|BAAT'] 78594 16970 PDSFNIPGSS True PC9_epitope_Rep1 1019.45598966987 1019.45488993586 70.099 2 -0.8341617990544182 0.25271197856211397 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 134913 5619 YADSGKLLC[Carbamidomethyl]F True NCI_RA007_Epitope_Rep2 1172.55359581559 1172.5524899358602 26.471 2 -0.8341741876115794 0.25271197856211397 1.0 ['ENST00000449567.6_1_11:24518651-24807587:+|nuORF'] 14931 11902 DYLRPVALT True NCI_RA007_Epitope_Rep1 1046.5760452328998 1046.57494993586 50.28 2 -0.8342057965648632 0.2527154443584673 1.0 ['ENSG00000143127|ENST00000369304|ITGA10', 'nc|ENSG00000143127|O75578-3|ITGA10'] 97890 10242 SHLRSFLER True PC9_epitope_Rep5 1143.61489035311 1143.61324490379 44.383 3 -0.8342762936877638 0.2527154443584673 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant', 'ENST00000560519.1_1_15:64026898-64041594:-|nuORF'] 41125 12885 HYNYQTILP True NCI_RA007_Epitope_Rep3 1147.56620882519 1147.5651099358602 57.945 2 -0.8342960674265042 0.2527154443584673 1.0 ['MRTFB|p.R884Afs*44|2|0.26|ENSG00000186260|chr16:14252443-14252443|C/-|frameshift_variant', 'nc|ENSG00000186260|Q9ULH7|MRTFB', 'ENSG00000186260|ENST00000571589|MRTFB', 'nc|ENSG00000186260|Q9ULH7-4|MRTFB', 'nc|ENSG00000186260|Q9ULH7-2|MRTFB', 'nc|ENSG00000186260|Q9ULH7-3|MRTFB'] 18153 6616 EINTEPAV True H1975_Epitope_Rep2 871.4287122928699 871.42760993586 30.356 2 -0.834314494814177 0.2527404817516156 1.0 ['ENSG00000214013|ENST00000318010|GANC', 'ENST00000567421.1_1_15:42570725-42619667:+|nuORF'] 67537 11801 LTEPALVKYF True NCI_RA007_Epitope_Rep1 1179.6539612004296 1179.65286993586 49.882 2 -0.8343371257698354 0.2527475676682572 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9'] 123926 3640 VKKHKKKRVV True PC9_epitope_Rep3 1248.85064437472 1248.84954993586 19.114 2 -0.8343467435503993 0.2527475676682572 1.0 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 104164 11711 SSASIGDMEKE True PC9_epitope_Rep1 1152.49686850568 1152.4957699358602 49.921 2 -0.8343749827135493 0.2527726035248603 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1-ZNF346|6|fusion', 'NSD1-C11orf58|2|fusion', 'NSD1-ZNF346|5|fusion', 'NSD1-ZNF346|4|fusion', 'NSD1-C11orf58|1|fusion', 'NSD1-ZNF346|8|fusion', 'NSD1-ZNF346|3|fusion', 'NSD1-ZNF346|7|fusion', 'NSD1|p.C2138Sfs*12|1|0.47|ENSG00000165671|chr5:177292108-177292108|G/-|frameshift_variant'] 11005 1900 DDGDDGGTDG True H1975_Epitope_Rep1 922.2788131535399 922.27770993586 9.8528 2 -0.8344629683770776 0.25280834479596515 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 54956 18968 LAHLHFEKLE True PC9_epitope_Rep5 1235.6662572196299 1235.6646149037902 77.984 3 -0.8344664074067385 0.25280834479596515 1.0 ['nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2', 'SPEF2|p.D702Mfs*8|1|0.22|ENSG00000152582|chr5:35697755-35697755|T/-|frameshift_variant', 'nc|ENSG00000152582|Q9C093-3|SPEF2'] 17994 14415 EIHDIQASP True PC9_epitope_Rep3 1008.4876241513199 1008.48652993586 60.551 2 -0.8344793978138629 0.2528154282603089 1.0 ['AGBL1|p.P457H|1|0.47|ENSG00000273540|chr15:86264541-86264541|C/A|missense_variant'] 129018 3520 VTAAHCVEKP True NCI_RA007_Epitope_Rep4 1053.52771514149 1053.52660993586 19.527 2 -0.834489490969485 0.2528154282603089 1.0 ['ENSG00000184012|ENST00000332149|TMPRSS2', 'nc|ENSG00000184012|O15393-2|TMPRSS2'] 3569 7069 AGNTGATGSPG True H1975_Epitope_Rep3 888.39372376648 888.39317496793 32.158 1 -0.8345356186574627 0.25284046135109967 1.0 ['COL3A1|p.P914T|1|0.1|ENSG00000168542|chr2:189004060-189004060|C/A|missense_variant'] 130731 6132 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep1 1029.44371111445 1029.4426099358602 28.401 2 -0.8345462584962065 0.25284392102925585 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 24851 16506 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 68.861 2 -0.834550437246479 0.25284392102925585 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 140133 25088 YVRLQLGG True NCI_RA007_Epitope_Rep5 904.5130510535198 904.51250496793 104.0 1 -0.8345672614614399 0.25284392102925585 1.0 ['ENSG00000168758|ENST00000305476|SEMA4C', 'ENST00000467747.1_1_2:97526365-97527817:-|nuORF', 'ENST00000474420.1_1_2:97526365-97527817:-|nuORF'] 5080 13891 ALLPLPPAA True H1975_Epitope_Rep1 861.53238951577 861.53128993586 58.581 2 -0.8345926991445496 0.252865329512894 1.0 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF'] 57355 13043 LEHFRTHPTVW True H1975_Epitope_Rep3 1421.72041805081 1421.71932993586 55.409 2 -0.8346114137080698 0.252865329512894 1.0 ['MMAA|p.R386W|1|0.32|ENSG00000151611|chr4:145655333-145655333|C/T|missense_variant'] 133903 16355 WNFSKPESLL True PC9_epitope_Rep3 1219.62372370131 1219.62262993586 68.044 2 -0.8347185869466209 0.25294766550622483 1.0 ['PEX7|p.D276E|1|0.22|ENSG00000112357|chr6:136898166-136898166|C/G|missense_variant'] 93302 19716 RRRYLRRKER True NCI_RA007_Epitope_Rep3 1487.9021794369498 1487.90053490379 85.961 3 -0.8347585655802177 0.25295474406544133 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 22169 4098 ETAQKIAK True NCI_RA007_Epitope_Rep2 887.5076313199098 887.50652993586 20.58 2 -0.8347919057304279 0.25295474406544133 1.0 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 24980 4248 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 22.662 2 -0.8349357104727602 0.25299755038892946 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 128919 11294 VSTPSQPL True PC9_epitope_Rep1 827.4388830537499 827.43778993586 48.322 2 -0.8349725152522092 0.25299755038892946 1.0 ['ENSG00000162460|ENST00000375782|TMEM82'] 126972 10517 VPVSRSLGPLG True NCI_RA007_Epitope_Rep5 1080.6291434349198 1080.6280499358602 47.086 2 -0.8349891510683705 0.25299755038892946 1.0 ['ENSG00000265203|ENST00000584701|RBP3'] 60257 1599 LIEATVIALTK True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 8.4672 3 -0.8349940637997187 0.25299755038892946 1.0 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 24981 5933 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 29.441 2 -0.8350351313729877 0.25302257620903046 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 44174 15705 ILQRVPPHAGT True H1975_Epitope_Rep1 1187.6774906096698 1187.67638993586 65.701 2 -0.8352093625889405 0.2531012748889844 1.0 ['ENST00000451194.5_1_3:50387445-50388060:-|nuORF'] 106299 4678 SVRGTSIADP True NCI_RA007_Epitope_Rep4 1001.5141732523299 1001.51306993586 24.415 2 -0.8352298043364976 0.2531012748889844 1.0 ['ENST00000369888.5_1_20:62588486-62588768:-|nuORF'] 12949 10215 DLNYYFNWIKT True NCI_RA007_Epitope_Rep2 1475.70851595443 1475.7074099358601 44.323 2 -0.8353008433809441 0.25313337057568075 1.0 ['ENSG00000047249|ENST00000359530|ATP6V1H', 'nc|ENSG00000047249|Q9UI12-2|ATP6V1H'] 127190 4628 VQGGREPAL True NCI_RA007_Epitope_Rep3 925.4981292653698 925.49702993586 25.123 2 -0.8353246505952933 0.25313337057568075 1.0 ['ENST00000316461.8_1_11:62496181-62496406:+|nuORF'] 70186 7093 LYLLHYFQNIL True PC9_epitope_Rep1 1435.7863723523099 1435.78471490379 32.092 3 -0.8353496363434216 0.25313337057568075 1.0 ['nc|ENSG00000171931|Q5XX13-3|FBXW10', 'nc|ENSG00000171931|Q5XX13-4|FBXW10', 'ENSG00000171931|ENST00000395665|FBXW10', 'nc|ENSG00000171931|Q5XX13-2|FBXW10', 'ENSG00000241322|ENST00000395906|FBXW10B'] 98879 14044 SIVTVKAF True PC9_epitope_Rep1 863.5116540711899 863.51054993586 58.858 2 -0.8353503534188583 0.2531404425982955 1.0 ['ENSG00000197410|ENST00000357232|DCHS2'] 100959 14644 SLSSFHIK True PC9_epitope_Rep1 917.49706663621 917.49596993586 61.151 2 -0.8353627713531251 0.2531404425982955 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2'] 132688 8184 VYSDAQPHI True PC9_epitope_Rep4 1028.49270953176 1028.4916099358602 38.94 2 -0.8353749311013656 0.25314751421573545 1.0 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|5|fusion', 'FGFR3-TACC3|2|fusion', 'FGFR3-TACC3|9|fusion', 'FGFR3-TACC3|14|fusion', 'FGFR3-TACC3|6|fusion', 'FGFR3-TACC3|4|fusion', 'FGFR3-TACC3|1|fusion', 'FGFR3-TACC3|13|fusion', 'FGFR3-TACC3|3|fusion', 'FGFR3-TACC3|15|fusion', 'ENSG00000068078|ENST00000440486|FGFR3', 'nc|ENSG00000068078|P22607-4|FGFR3', 'nc|ENSG00000068078|P22607-2|FGFR3', 'ENSG00000160867|ENST00000292408|FGFR4', 'nc|ENSG00000160867|P22455-2|FGFR4', 'nc|ENSG00000068078|P22607-3|FGFR3', 'nc|ENSG00000066468|P21802-19|FGFR2', 'FGFR2|p.W290C|2|0.36|ENSG00000066468|chr10:121520048-121520048|C/G|missense_variant', 'FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-15|FGFR2', 'ENST00000508139.1_1_5:176518793-176520368:+|nuORF'] 123925 4955 VKKHKKKRVV True PC9_epitope_Rep1 1248.85064437472 1248.84954993586 23.919 2 -0.8353807207794112 0.25314751421573545 1.0 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 83548 9872 QDNENVVNEY True H1975_Epitope_Rep3 1222.5102100707 1222.5096749679299 43.001 1 -0.8354459294041074 0.2532011802114068 1.0 ['CON__P02676'] 74631 15337 NLEIIDLYRKK True H1975_Epitope_Rep1 1403.8136497293096 1403.81254993586 64.263 2 -0.8355109446262061 0.2532261991721451 1.0 ['ENST00000573577.5_1_17:5336118-5336172:+|nuORF'] 78925 8824 PFEIVWGMRRP True NCI_RA007_Epitope_Rep5 1386.7230609030998 1386.7219699358602 40.608 2 -0.8356014803897901 0.25326553995989687 1.0 ['ENST00000488457.1_1_2:25600201-25602432:-|nuORF'] 123924 4623 VKKHKKKRVV True PC9_epitope_Rep1 1248.85064437472 1248.84954993586 22.654 2 -0.8356454692922928 0.25330125175446133 1.0 ['nc|ENSG00000135506|Q13438-6|OS9', 'nc|ENSG00000135506|Q13438-5|OS9', 'nc|ENSG00000135506|Q13438-2|OS9', 'nc|ENSG00000135506|Q13438-7|OS9', 'ENSG00000135506|ENST00000315970|OS9', 'ENST00000549307.5_1_12:58109828-58113249:+|nuORF', 'nc|ENSG00000135506|Q13438-8|OS9', 'nc|ENSG00000135506|Q13438-3|OS9', 'nc|ENSG00000135506|Q13438-4|OS9'] 28007 10034 FQWWRMDWTPR True NCI_RA007_Epitope_Rep1 1607.7455872528296 1607.74393490379 43.039 3 -0.8356812254608431 0.25330125175446133 1.0 ['ENST00000582986.5_1_17:62801160-62833227:-|nuORF', 'ENST00000430334.7_1_17:43555485-43568071:-|nuORF'] 39736 15271 HPWQVRHSRHK True H1975_Epitope_Rep1 1466.7755819415 1466.7744899358602 64.007 2 -0.8356917788270747 0.2533083180568286 1.0 ['ENST00000360862.9_2_16:3534932-3535735:+|nuORF'] 98644 5618 SIPGPEGDP True H1975_Epitope_Rep3 867.3974121645899 867.39630993586 26.646 2 -0.8357138031401257 0.2533083180568286 1.0 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 30459 7240 GAGGGGGR True H1975_Epitope_Rep1 587.2775718154301 587.2770249679301 32.86 1 -0.8357768796167119 0.25331538395440095 1.0 ['ENSG00000272333|ENST00000420124|KMT2B'] 79289 13685 PGIAAIALA True H1975_Epitope_Rep1 795.48543932335 795.48434993586 57.775 2 -0.8357923408139276 0.25331538395440095 1.0 ['ENSG00000188133|ENST00000342743|TMEM215'] 110888 18032 TLAGKLDRR True PC9_epitope_Rep1 1028.60907669668 1028.6079699358602 74.152 2 -0.8358530425146298 0.25332607730534035 1.0 ['ENST00000581471.2_1_18:5238635-5238728:+|nuORF'] 53633 13513 KWLQDLQEE True PC9_epitope_Rep6 1187.58225281215 1187.5811499358601 63.699 2 -0.8358974536901447 0.2533581555205499 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1', 'ENST00000555164.2_1_14:56119589-56122865:+|nuORF'] 56441 11061 LDSLVLDSHK True H1975_Epitope_Rep3 1125.6029882567302 1125.60188993586 47.637 2 -0.8359247239577442 0.2533581555205499 1.0 ['nc|ENSG00000155719|Q7RTW8-2|OTOA', 'nc|ENSG00000155719|Q7RTW8-4|OTOA', 'ENSG00000155719|ENST00000646100|OTOA', 'nc|ENSG00000155719|Q7RTW8|OTOA'] 129245 11357 VTDNRYEP True NCI_RA007_Epitope_Rep1 992.4563240230399 992.45522993586 48.15 2 -0.8359261076101918 0.2533581555205499 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant'] 56404 18374 LDSEAWPGV True PC9_epitope_Rep4 972.4552613938798 972.45416993586 78.741 2 -0.8360240175686902 0.25336159122477914 1.0 ['ENSG00000113645|ENST00000265293|WWC1', 'nc|ENSG00000113645|Q8IX03-2|WWC1'] 3276 7987 AGGARARWR True PC9_epitope_Rep1 999.5474794996298 999.54638993586 35.544 2 -0.8360255895499411 0.25336159122477914 1.0 ['ENSG00000109743|ENST00000265016|BST1'] 91726 24364 RPIQLKIQDEK True PC9_epitope_Rep1 1366.7932486378998 1366.79161490379 98.548 3 -0.8360344169068934 0.25336159122477914 1.0 ['nc|ENSG00000169435|Q6ZTQ3-4|RASSF6', 'nc|ENSG00000169435|Q6ZTQ3-3|RASSF6', 'ENSG00000169435|ENST00000307439|RASSF6', 'nc|ENSG00000169435|Q6ZTQ3|RASSF6'] 46083 17173 ISYPRRRMFWK True NCI_RA007_Epitope_Rep1 1538.82925730714 1538.8281499358602 70.932 2 -0.8360825469611152 0.2533829741533615 1.0 ['PGBD2|p.E202K|1|0.23|ENSG00000185220|chr1:248917188-248917188|G/A|missense_variant'] 17027 9460 EGLTDVIRDVP True H1975_Epitope_Rep1 1212.6350166609998 1212.6339099358602 41.305 2 -0.836118602656398 0.2533829741533615 1.0 ['ENSG00000155034|ENST00000382368|FBXL18'] 18424 4130 EKFDLRRFFCT True NCI_RA007_Epitope_Rep2 1460.7234548259196 1460.7217949037902 20.703 3 -0.8361424111969139 0.25339003679997707 1.0 ['DYNC2H1|p.L3244F|1|0.25|ENSG00000187240|chr11:103236450-103236450|C/T|missense_variant'] 65969 15272 LSLRAPETVP True PC9_epitope_Rep2 1081.6131590176099 1081.61206993586 64.02 2 -0.8361441406841458 0.25339003679997707 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.A1416Pfs*6|1|0.33|ENSG00000047936|chr6:117353065-117353065|C/-|frameshift_variant', 'ROS1|p.F1067Lfs*13|1|0.31|ENSG00000047936|chr6:117362783-117362783|A/-|frameshift_variant'] 92587 25130 RRCRRRLREAR True PC9_epitope_Rep3 1526.89129748342 1526.8902099358602 102.01 2 -0.8361714640008967 0.2534007273976918 1.0 ['ENST00000456859.2_1_12:57066766-57082127:-|nuORF'] 36327 16776 GVGVRWRQQ True PC9_epitope_Rep5 1084.5890099584399 1084.5879099358601 69.536 2 -0.8361963029950051 0.2534543736307794 1.0 ['ENST00000546514.1_1_12:50561052-50561130:-|nuORF'] 78646 4245 PDYEPKPTQ True H1975_Epitope_Rep2 1073.5029398622898 1073.50184993586 21.439 2 -0.8362427219381854 0.253461235593099 1.0 ['ENSG00000101842|ENST00000217957|VSIG1', 'nc|ENSG00000101842|Q86XK7-2|VSIG1'] 30154 4493 FYRTYMLFK True NCI_RA007_Epitope_Rep4 1267.6423509709095 1267.64071490379 23.668 3 -0.8362484890225872 0.253461235593099 1.0 ['nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3', 'ENSG00000139508|ENST00000266943|SLC46A3', 'nc|ENSG00000139508|Q7Z3Q1-2|SLC46A3'] 88645 21897 RARRRTTA True PC9_epitope_Rep4 986.5845932843399 986.58348993586 92.437 2 -0.8363081288435876 0.253461235593099 1.0 ['ENSG00000214107|ENST00000397548|MAGEB1'] 225 8483 AAFTGVSAA True PC9_epitope_Rep6 793.39701824177 793.39592993586 42.344 2 -0.8363206697247408 0.253461235593099 1.0 ['ENST00000462537.3_1_6:36646652-36648255:+|nuORF'] 118963 11831 VEEWPLEAL True NCI_RA007_Epitope_Rep4 1084.54407639828 1084.5429699358601 52.489 2 -0.8363209938005166 0.253461235593099 1.0 ['ENST00000314289.12_2_4:2515676-2516066:+|nuORF'] 119219 16572 VEKQLKLRERP True H1975_Epitope_Rep1 1394.83578215622 1394.83468993586 69.119 2 -0.8363226880105337 0.253461235593099 1.0 ['ENST00000511562.5_1_4:164415926-164433975:+|nuORF'] 107027 19069 SYLPFTEAF True NCI_RA007_Epitope_Rep2 1073.5069626135698 1073.50637496793 79.025 1 -0.8363275614363823 0.2534682949876158 1.0 ['nc|ENSG00000162430|Q9NZV5-2|SELENON', 'ENSG00000162430|ENST00000361547|SELENON'] 28972 21572 FTFYDYSYLQ True PC9_epitope_Rep1 1345.58666948625 1345.5855699358601 87.797 2 -0.8363361234421895 0.2534682949876158 1.0 ['ENSG00000151320|ENST00000280979|AKAP6'] 19867 16444 ELVQYRWPRWL True H1975_Epitope_Rep1 1544.8252174725199 1544.8241299358601 68.615 2 -0.8363740139197706 0.25347898293437177 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 23024 9229 EVKEILPEAVK True NCI_RA007_Epitope_Rep1 1253.7231033894097 1253.7220099358601 39.897 2 -0.8364781113758033 0.25351830376956 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF'] 112270 14126 TLYRNRRK True PC9_epitope_Rep5 1105.64685918773 1105.64576993586 59.346 2 -0.8365793029723624 0.25355399350045094 1.0 ['ENST00000506451.1_1_4:120415631-120418847:+|nuORF'] 128201 12190 VRVASPSL True PC9_epitope_Rep3 827.4865019525099 827.48540993586 51.922 2 -0.836622421169709 0.25355399350045094 1.0 ['nc|ENSG00000134575|P11117-2|ACP2', 'ENST00000444355.5_1_11:47267202-47270343:-|nuORF'] 80175 6655 PLAAGQSRLRH True H1975_Epitope_Rep1 1204.6788875920001 1204.6777899358601 30.649 2 -0.8366395083166678 0.253571735333696 1.0 ['nc|ENSG00000101182|O14818-4|PSMA7', 'ENST00000484488.5_1_20:60714188-60718428:-|nuORF'] 73132 7663 NEAPWVTDKRP True H1975_Epitope_Rep3 1311.65714908791 1311.6560499358602 34.457 2 -0.8366527302732457 0.253571735333696 1.0 ['ABCC2|p.N1303Tfs*49|1|0.1|ENSG00000023839|chr10:99844385-99844385|A/-|frameshift_variant', 'ENSG00000023839|ENST00000647814|ABCC2'] 96526 15584 SELLIHWEN True PC9_epitope_Rep1 1139.5611234447501 1139.56002993586 64.766 2 -0.8366705514792091 0.253571735333696 1.0 ['ENST00000485671.1_1_X:104993011-105009296:+|nuORF'] 46454 10734 ITMAQIDQA True PC9_epitope_Rep4 989.48518162317 989.48408993586 49.046 2 -0.8367674578531301 0.2535824207286522 1.0 ['nc|ENSG00000152520|Q58A45-4|PAN3', 'ENST00000503791.5_1_13:28712794-28846220:+|nuORF', 'nc|ENSG00000152520|Q58A45-3|PAN3', 'ENSG00000152520|ENST00000380958|PAN3', 'nc|ENSG00000152520|Q58A45-2|PAN3'] 93484 17944 RSHLKKKSIV True PC9_epitope_Rep6 1194.75607528354 1194.75442490379 81.647 3 -0.8368233398667277 0.2536074209803023 1.0 ['ENSG00000178105|ENST00000322536|DDX10'] 120935 9858 VGEIVCETPFR True H1975_Epitope_Rep1 1248.61725842188 1248.6161699358602 42.851 2 -0.8369471688012923 0.25364310458358386 1.0 ['ENSG00000185985|ENST00000335565|SLITRK2', 'SLITRK2|p.R655Kfs*21|1|0.41|ENSG00000185985|chrX:145824387-145824388|-/A|frameshift_variant', 'nc|ENSG00000185985|Q9H156-2|SLITRK2'] 62311 16033 LLQTKMVF True PC9_epitope_Rep2 978.55722436462 978.55612993586 66.927 2 -0.8369506683609812 0.25364310458358386 1.0 ['ENST00000467675.5_1_10:126095965-126097319:-|nuORF'] 107784 5789 TAMGKTWHP True NCI_RA007_Epitope_Rep2 1027.49093570995 1027.4898299358601 27.135 2 -0.8369627084706301 0.25366810289297015 1.0 ['nc|ENSG00000089159|P49023-2|PXN', 'nc|ENSG00000089159|P49023|PXN', 'nc|ENSG00000089159|P49023-3|PXN', 'ENSG00000089159|ENST00000637617|PXN', 'nc|ENSG00000089159|P49023-4|PXN', 'ENST00000323871.9_2_12:120650119-120654597:-|nuORF'] 136322 7322 YHAADLSL True PC9_epitope_Rep4 888.43413202648 888.43302993586 35.492 2 -0.8370181629333223 0.25368220660435425 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 101150 9319 SLVNTVKA True PC9_epitope_Rep5 830.48616759934 830.48506993586 40.798 2 -0.8370185993442134 0.25368220660435425 1.0 ['nc|ENSG00000186960|Q86U37|LINC01551', 'ENST00000399387.8_1_14:29242013-29261464:+|nuORF'] 19928 23409 ELYINYDCDYY True PC9_epitope_Rep5 1472.58059812964 1472.5795099358602 95.025 2 -0.8370413834003683 0.25368220660435425 1.0 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 139210 4742 YSVGSESDSSK True NCI_RA007_Epitope_Rep3 1144.48841199696 1144.48675490379 25.605 3 -0.8370732697592365 0.25368220660435425 1.0 ['ENSG00000162105|ENST00000601538|SHANK2', 'SHANK2|p.V1494Gfs*6|1|0.14|ENSG00000162105|chr11:70485812-70485813|-/C|frameshift_variant'] 128828 12637 VSSDQQEHF True PC9_epitope_Rep1 1075.45705229903 1075.4559499358602 53.479 2 -0.8371407857527785 0.25373582961181723 1.0 ['nc|ENSG00000151164|Q6WBX8-3|RAD9B', 'nc|ENSG00000151164|Q6WBX8-4|RAD9B', 'nc|ENSG00000151164|Q6WBX8-2|RAD9B', 'nc|ENSG00000151164|Q6WBX8-1|RAD9B', 'ENSG00000151164|ENST00000409300|RAD9B', 'nc|ENSG00000151164|Q6WBX8|RAD9B'] 130234 7888 VTSNLTKI True NCI_RA007_Epitope_Rep4 874.51238234718 874.51128993586 37.068 2 -0.8371927906696444 0.2537465111286052 1.0 ['ENSG00000143971|ENST00000272342|ETAA1'] 58162 5283 LESHFQSQKDC True H1975_Epitope_Rep3 1320.57685016188 1320.57520490379 25.403 3 -0.837200021728963 0.2537571923396216 1.0 ['ENSG00000128833|ENST00000261839|MYO5C'] 57385 15390 LEHNLQLLID True PC9_epitope_Rep2 1206.66083748602 1206.6597499358602 64.48 2 -0.8372352507173123 0.25376787324487954 1.0 ['ENSG00000100109|ENST00000407690|TFIP11'] 107378 19714 SYSPLLREF True PC9_epitope_Rep3 1110.57095985246 1110.5698699358602 81.059 2 -0.8372468323644132 0.25377833753148615 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion', 'ENST00000370677.4_1_20:60920618-60942301:-|nuORF', 'nc|ENSG00000130702|O15230-2|LAMA5'] 18619 12213 ELALFFKGPGP True PC9_epitope_Rep2 1174.6386454894598 1174.63754993586 52.289 2 -0.83727132811933 0.25377833753148615 1.0 ['ENST00000271332.3_1_1:109817722-109817794:+|nuORF'] 126106 14813 VPEDPTQCFLL True PC9_epitope_Rep5 1260.60602503184 1260.6049299358601 61.979 2 -0.8373172625075422 0.25377833753148615 1.0 ['CYB5R1|p.K238Nfs*34|1|0.14|ENSG00000159348|chr1:202963096-202963097|GC/-|frameshift_variant', 'ENSG00000159348|ENST00000367249|CYB5R1', 'ENST00000497655.1_1_1:202932056-202932895:-|nuORF'] 71766 5062 MNFEVFIHK True NCI_RA007_Epitope_Rep4 1163.57975071435 1163.57809490379 25.972 3 -0.8373230846156282 0.25377833753148615 1.0 ['ENSG00000116954|ENST00000373001|RRAGC'] 111593 20351 TLNLFLNFL True PC9_epitope_Rep1 1093.61718176889 1093.6160899358601 83.11 2 -0.8373481764299656 0.25377833753148615 1.0 ['Tigger3b_dup1661|chr4:76922990-76924128:+|1.148447326952616|0.3752794373866462|1.61|502.0|67|2|anti-sense'] 57059 4917 LEEHGGEEPP True H1975_Epitope_Rep2 1092.4723680099999 1092.4712699358602 23.995 2 -0.8373761461184044 0.2538103756708408 1.0 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-4|MTCL1', 'ENST00000581670.1_1_18:8831598-8831835:+|nuORF'] 46174 11623 ITDETEENFI True PC9_epitope_Rep3 1209.54011321665 1209.5384549037901 49.724 3 -0.8373851004479538 0.2538103756708408 1.0 ['nc|ENSG00000153246|Q13018-2|PLA2R1', 'ENSG00000153246|ENST00000283243|PLA2R1'] 98181 15925 SIDNLPAQL True PC9_epitope_Rep1 969.51311062317 969.51200993586 66.065 2 -0.8373914960628751 0.2538103756708408 1.0 ['AASS|p.D834Rfs*21|1|0.27|ENSG00000008311|chr7:122078000-122078001|-/T|frameshift_variant', 'ENSG00000008311|ENST00000417368|AASS', 'AASS|p.C398F|1|0.23|ENSG00000008311|chr7:122113203-122113203|C/A|missense_variant'] 16540 13050 EEQERQELF True NCI_RA007_Epitope_Rep4 1206.55168095986 1206.5505899358602 57.298 2 -0.8374219575197084 0.2538210544392925 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 108075 9421 TDLEWQEPA True H1975_Epitope_Rep2 1087.48220441771 1087.48110993586 41.206 2 -0.8375201896571629 0.25384604376261144 1.0 ['ENST00000484975.5_1_20:44472013-44472349:-|nuORF'] 116254 7344 TVVATSTPPP True NCI_RA007_Epitope_Rep3 968.51786165044 968.51676993586 36.011 2 -0.8375488163026256 0.2538530889108316 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'RREB1|p.A584Gfs*8|1|0.14|ENSG00000124782|chr6:7229846-7229847|-/G|frameshift_variant'] 135406 13970 YDQCENRWTVP True H1975_Epitope_Rep2 1409.60339926289 1409.6023099358601 58.883 2 -0.8376046998901657 0.2538530889108316 1.0 ['nc|ENSG00000171617|O14682-2|ENC1', 'ENSG00000171617|ENST00000302351|ENC1'] 37500 12031 GYGENYYSAP True PC9_epitope_Rep1 1119.4509042894301 1119.44980993586 51.138 2 -0.8376164744657069 0.2538744436971423 1.0 ['ENST00000523459.5_1_8:42091328-42128215:-|nuORF'] 128062 16821 VRRLPGGG True NCI_RA007_Epitope_Rep1 810.4824196315798 810.48132993586 69.56 2 -0.837618718777064 0.2538744436971423 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 91572 18192 RPAPARLALR True NCI_RA007_Epitope_Rep4 1119.6988947605898 1119.69778993586 78.726 2 -0.8376740986273841 0.25389943046850405 1.0 ['ENST00000211379.9_1_6:31619532-31620470:-|nuORF', 'ENST00000375964.10_1_6:31619532-31620470:-|nuORF'] 27359 6614 FMMRWPTSRPW True PC9_epitope_Rep3 1493.7060309399697 1493.70439490379 30.466 3 -0.8376760586863802 0.2539064735847977 1.0 ['ENST00000329138.8_1_17:79654057-79654111:+|nuORF'] 85870 8046 QNGLASSLPA True NCI_RA007_Epitope_Rep3 956.4927095317599 956.49160993586 38.736 2 -0.8376872509117851 0.2539064735847977 1.0 ['nc|ENSG00000118495|Q9UM63-2|PLAGL1', 'ENSG00000118495|ENST00000674357|PLAGL1'] 61003 5587 LLALHSAA True PC9_epitope_Rep4 794.4650382319401 794.46394993586 28.272 2 -0.8377040924920559 0.25391714960291906 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 85613 7563 QLNLNNEWTL True H1975_Epitope_Rep1 1243.61970095003 1243.6186099358601 34.085 2 -0.8377970751106399 0.2539564433505995 1.0 ['ENSG00000136802|ENST00000372600|LRRC8A'] 32640 6119 GHGSVSVTMI True PC9_epitope_Rep2 986.48551597634 986.48440993586 28.932 2 -0.837811638557973 0.25396348443223443 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'nc|ENSG00000204271|Q5JUX0-2|SPIN3'] 4691 21275 ALDIREHYERK True PC9_epitope_Rep5 1428.74736107464 1428.74626993586 86.887 2 -0.8378405124577241 0.25396348443223443 1.0 ['nc|ENSG00000139625|Q12852|MAP3K12', 'ENSG00000139625|ENST00000547488|MAP3K12', 'ENST00000547020.1_1_12:53877389-53878109:-|nuORF', 'ENST00000552365.1_1_12:53874968-53878035:-|nuORF', 'nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 99492 7540 SLEQVDILWHC True NCI_RA007_Epitope_Rep2 1341.63872214245 1341.63762993586 33.955 2 -0.8378911993485805 0.2540563743024753 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 78858 16987 PESCPRGCPP True PC9_epitope_Rep1 1041.43718588493 1041.43608993586 70.163 2 -0.8379320498832215 0.2540563743024753 1.0 ['nc|ENSG00000135409|Q16671-3|AMHR2', 'ENSG00000135409|ENST00000257863|AMHR2'] 19802 5468 ELTKNIPM[Oxidation]EK True NCI_RA007_Epitope_Rep2 1217.6325745132897 1217.6314699358602 25.888 2 -0.8380031459928671 0.2540702166013334 1.0 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant', 'BRCA2|p.L1390Ffs*13|1|0.17|ENSG00000139618|chr13:32338518-32338519|-/T|frameshift_variant'] 28732 13215 FSWFPILF True PC9_epitope_Rep5 1055.5480395799098 1055.54694993586 55.839 2 -0.838013735781096 0.2540702166013334 1.0 ['nc|ENSG00000100462|O14744-3|PRMT5', 'nc|ENSG00000100462|O14744-5|PRMT5', 'nc|ENSG00000100462|O14744-2|PRMT5', 'ENSG00000100462|ENST00000324366|PRMT5', 'nc|ENSG00000100462|O14744-4|PRMT5'] 78599 16781 PDSFNIPGSS True PC9_epitope_Rep3 1019.45598966987 1019.4554749679301 69.694 1 -0.8380337784111654 0.2540702166013334 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 36366 5578 GVHQGGNLL True PC9_epitope_Rep4 893.47191451753 893.47080993586 28.232 2 -0.8380365005569799 0.2540702166013334 1.0 ['nc|ENSG00000020219|A6NM43|CCT8L1P', 'CCT8L2|p.I552Sfs*4|1|0.32|ENSG00000198445|chr22:16590897-16590897|T/-|frameshift_variant', 'ENSG00000198445|ENST00000359963|CCT8L2'] 20144 17747 ENLSVDLTY True PC9_epitope_Rep1 1052.50260550912 1052.50207496793 73.062 1 -0.8380756423083546 0.2540702166013334 1.0 ['ENSG00000090060|ENST00000216277|PAPOLA', 'ENST00000555701.5_1_14:97009102-97018851:+|nuORF'] 57685 13194 LEMSSEAKATS True NCI_RA007_Epitope_Rep5 1152.5332540144 1152.53161490379 57.43 3 -0.8381236880199804 0.2540702166013334 1.0 ['ENSG00000084090|ENST00000337288|STARD7'] 20067 14111 ENEVGKLFF True PC9_epitope_Rep5 1081.5444107514497 1081.5433099358602 59.288 2 -0.838178376490008 0.2540702166013334 1.0 ['SMG7|p.L484F|1|0.05|ENSG00000116698|chr1:183542112-183542112|G/C|missense_variant'] 110128 7382 TICLNVFY True H1975_Epitope_Rep3 971.47863969075 971.47754993586 33.374 2 -0.8381875128482221 0.2540702166013334 1.0 ['TAS2R8|p.T101I|1|0.3|ENSG00000121314|chr12:10806679-10806679|G/A|missense_variant'] 139156 18629 YSRYHQKYL True PC9_epitope_Rep3 1256.6302060640799 1256.62855490379 76.877 3 -0.8382931451288573 0.2540842894337787 1.0 ['ENST00000523024.1_2_8:10340492-10341737:-|nuORF'] 4380 19432 AIQQQTLVVPA True PC9_epitope_Rep1 1166.66592286646 1166.66482993586 79.558 2 -0.8383040740223725 0.2540842894337787 1.0 ['ZNF532|p.V505L|1|0.09|ENSG00000074657|chr18:58919800-58919800|G/C|missense_variant'] 123474 8208 VIFWSNYRQVT True H1975_Epitope_Rep3 1411.72483472491 1411.72372993586 36.554 2 -0.8383404485181071 0.2540842894337787 1.0 ['TMEM252|p.G57V|1|0.93|ENSG00000181778|chr9:68540645-68540645|C/A|missense_variant'] 100307 22977 SLLWIWMAEL True PC9_epitope_Rep1 1260.6576666818798 1260.65656993586 93.18 2 -0.8383418253272168 0.2540842894337787 1.0 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'ENST00000431180.5_1_3:47122459-47155398:-|nuORF'] 80499 16297 PLLIIIYCYIF True NCI_RA007_Epitope_Rep2 1369.77196815813 1369.7708699358602 68.12 2 -0.838405509543348 0.25410563057907987 1.0 ['ENSG00000122375|ENST00000241891|OPN4', 'nc|ENSG00000122375|Q9UHM6-2|OPN4'] 23553 18716 EWYWRYSEERR True PC9_epitope_Rep4 1658.7589883875 1658.75788993586 80.07 2 -0.8384512442157895 0.25410563057907987 1.0 ['MMP24|p.R495W|1|0.27|ENSG00000125966|chr20:35271718-35271718|C/T|missense_variant'] 139720 2851 YTWRWVWSWEW True H1975_Epitope_Rep1 1683.7622828627896 1683.76063490379 14.585 3 -0.8384653255050306 0.2541163006937987 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 59752 12085 LGVWCWLL True PC9_epitope_Rep6 988.52044493308 988.51934993586 57.807 2 -0.8384801269151437 0.2541228634770793 1.0 ['ENST00000336576.9_2_2:220150866-220150965:+|nuORF'] 90494 24540 RKAGGGGG True H1975_Epitope_Rep3 658.3510711088599 658.35052496793 102.13 1 -0.8385073422764685 0.2541228634770793 1.0 ['ENST00000320225.9_2_16:2314685-2318195:-|nuORF', 'ENST00000301730.12_3_16:2314685-2318093:-|nuORF'] 25078 2983 FDFMDAPP True NCI_RA007_Epitope_Rep2 938.3844049527398 938.38330993586 16.15 2 -0.838511951812009 0.2541228634770793 1.0 ['ENSG00000067596|ENST00000262415|DHX8'] 124592 17928 VLHFKPCI True PC9_epitope_Rep5 955.5313439699498 955.53024993586 73.977 2 -0.8385371279777575 0.2541228634770793 1.0 ['ENST00000330374.6_1_X:150577636-150577702:+|nuORF'] 3552 14115 AGNGRWQQSL True PC9_epitope_Rep5 1115.54720471611 1115.5461099358602 59.305 2 -0.838553970530266 0.2541228634770793 1.0 ['ENST00000515258.2_9:67786282-67786537:+|nuORF'] 5767 9599 APEFEPHP True NCI_RA007_Epitope_Rep1 922.4184819623399 922.41738993586 41.335 2 -0.8385553747067357 0.2541228634770793 1.0 ['ENSG00000128652|ENST00000683222|HOXD3'] 127999 23120 VRQLRHLHRTR True PC9_epitope_Rep4 1470.8756303359398 1470.8745299358602 97.15 2 -0.8385726114162626 0.2541228634770793 1.0 ['nc|ENSG00000184274|P59091|LINC00315'] 35324 12596 GSVEEQLKSLK True NCI_RA007_Epitope_Rep2 1216.66631678928 1216.66520993586 53.608 2 -0.8385731245099165 0.2541228634770793 1.0 ['nc|ENSG00000130347|Q8WWV3-2|RTN4IP1', 'ENSG00000130347|ENST00000369063|RTN4IP1'] 59905 20691 LHIDSLNHV True PC9_epitope_Rep5 1046.5508931142201 1046.5497899358602 84.643 2 -0.8385734551397411 0.2541228634770793 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'CHD9|p.W1426Mfs*3|1|0.15|ENSG00000177200|chr16:53263047-53263048|-/A|frameshift_variant'] 45535 10112 ISFSHDSQY True H1975_Epitope_Rep1 1082.46688870674 1082.4657899358601 43.832 2 -0.8386236619199172 0.2541228634770793 1.0 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000535257.1_1_12:122391860-122397069:+|nuORF'] 30764 6676 GAPEGSPVWSS True NCI_RA007_Epitope_Rep3 1072.48253877088 1072.4814499358602 33.341 2 -0.8386733588560781 0.25412989687772647 1.0 ['ENSG00000023171|ENST00000635736|GRAMD1B'] 15006 3817 DYVYWTDWQRR True NCI_RA007_Epitope_Rep2 1586.7266256300597 1586.72497490379 19.481 3 -0.8386756098085224 0.25412989687772647 1.0 ['ENSG00000070018|ENST00000261349|LRP6', 'LRP6|p.L805Ffs*10|2|0.2|ENSG00000070018|chr12:12159831-12159831|G/-|frameshift_variant'] 121656 7066 VGLHQQAP True PC9_epitope_Rep5 848.4504507969599 848.44934993586 32.147 2 -0.8387231453929191 0.25415123214004776 1.0 ['ENST00000415949.5_1_7:54825255-54826914:-|nuORF'] 80905 7327 PLYSQKRYEEI True NCI_RA007_Epitope_Rep2 1424.729979675 1424.72833490379 33.124 3 -0.8387416707434253 0.25415123214004776 1.0 ['ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 136048 22450 YFSVAHFS True NCI_RA007_Epitope_Rep5 956.43921740692 956.43812993586 93.525 2 -0.8387727368143659 0.25416869261791036 1.0 ['ENST00000216024.6_1_22:38964257-38966082:-|nuORF'] 13449 9323 DNVLINTYSG True NCI_RA007_Epitope_Rep1 1094.52440358286 1094.5233099358602 40.259 2 -0.8387769773764958 0.25416869261791036 1.0 ['ENSG00000197442|ENST00000359015|MAP3K5', 'nc|ENSG00000197442|Q99683-2|MAP3K5'] 82483 7355 PVECPSAA True PC9_epitope_Rep5 772.3425401407599 772.3414499358599 33.249 2 -0.8387779486926894 0.25416869261791036 1.0 ['ENST00000570209.1_1_15:31108772-31126588:+|nuORF'] 127197 18263 VQHEVYSEVP True PC9_epitope_Rep2 1185.56660274801 1185.56550993586 75.57 2 -0.8387977236722464 0.25416869261791036 1.0 ['ENST00000367353.1_1_1:200377814-200377871:-|nuORF'] 30849 7101 GAQPLAAAQG True PC9_epitope_Rep4 882.4559301002198 882.45482993586 34.58 2 -0.8388007684233636 0.25416869261791036 1.0 ['ENST00000407149.6_1_5:119799996-119800155:+|nuORF'] 60563 21607 LIQSLTLSP True PC9_epitope_Rep3 970.5698972233 970.56880993586 88.408 2 -0.8388058534441716 0.25416869261791036 1.0 ['ENST00000489097.5_1_1:6526697-6527309:-|nuORF'] 62236 4407 LLQAGKAG True PC9_epitope_Rep4 756.4493881678 756.44828993586 23.398 2 -0.8388278383311286 0.25416869261791036 1.0 ['ENSG00000278619|ENST00000614766|MRM1'] 97212 7282 SFKKFVRRAVY True NCI_RA007_Epitope_Rep4 1399.8088391323902 1399.80774993586 34.647 2 -0.8388732404508182 0.254179358473837 1.0 ['ENST00000378026.4_3_12:106631936-106632293:-|nuORF'] 128528 5246 VSGQPQSVTA True PC9_epitope_Rep1 972.4876241513199 972.48652993586 25.026 2 -0.8389063186767587 0.25419002402471114 1.0 ['ENST00000524192.6_1_20:61904210-61909556:+|nuORF', 'nc|ENSG00000101199|Q8N6T3-4|ARFGAP1', 'ENST00000519531.5_1_20:61904210-61914317:+|nuORF', 'nc|ENSG00000101199|Q8N6T3-5|ARFGAP1', 'nc|ENSG00000101199|Q8N6T3-3|ARFGAP1', 'ENSG00000101199|ENST00000370283|ARFGAP1', 'nc|ENSG00000101199|Q8N6T3-2|ARFGAP1'] 89563 10304 RERYEDSQQEE True PC9_epitope_Rep5 1467.62261405399 1467.62150993586 44.622 2 -0.838966092334614 0.2541968141390454 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1', 'NUMA1|p.V1306Wfs*10|1|0.17|ENSG00000137497|chr11:72013587-72013587|C/-|frameshift_variant'] 91432 19469 RNLLRIREK True H1975_Epitope_Rep2 1196.746573229 1196.74546993586 80.793 2 -0.8389749057197909 0.2541968141390454 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'AFF1|p.P608Tfs*61|1|0.22|ENSG00000172493|chr4:87114669-87114670|-/A|frameshift_variant'] 36961 16239 GVRIKRTS True NCI_RA007_Epitope_Rep3 915.5613982282699 915.56084496793 71.564 1 -0.8389787116325464 0.2541968141390454 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 46327 21937 ITFLEYYSKNY True PC9_epitope_Rep3 1439.6972825643898 1439.69618993586 89.68 2 -0.8390209908231125 0.2541968141390454 1.0 ['ENSG00000197181|ENST00000356766|PIWIL2', 'nc|ENSG00000197181|Q8TC59-2|PIWIL2'] 43971 20677 ILGEKVPDL True PC9_epitope_Rep3 982.5698972232998 982.56880993586 84.808 2 -0.8390398988318728 0.2541968141390454 1.0 ['ENSG00000258890|ENST00000556440|CEP95', 'ENST00000580188.1_2_17:62503129-62515542:+|nuORF'] 133642 23437 WKLCLKKKK True PC9_epitope_Rep6 1173.74200544253 1173.7403549037901 103.26 3 -0.8390485731276467 0.2541968141390454 1.0 ['nc|ENSG00000134744|Q5TAX3-2|TUT4'] 87759 12080 QVFRWSHP True NCI_RA007_Epitope_Rep3 1055.5300980999898 1055.5290099358601 54.637 2 -0.839072609196367 0.25421450734232237 1.0 ['DISP1|p.S757W|1|0.23|ENSG00000154309|chr1:223003667-223003667|C/G|missense_variant'] 58431 6403 LEWDMEKEL True PC9_epitope_Rep2 1191.5481758025498 1191.54652490379 30.036 3 -0.8390911243246773 0.25421450734232237 1.0 ['NAALADL2-ABCC5|1|fusion', 'nc|ENSG00000177694|Q58DX5-2|NAALADL2', 'ENST00000485853.5_1_3:174577149-174974391:+|nuORF', 'ENST00000473253.5_1_3:174581768-175298945:+|nuORF', 'NAALADL2|p.I703Dfs*4|1|0.12|ENSG00000177694|chr3:175755333-175755343|CCCATCCGCAT/-|frameshift_variant', 'ENSG00000177694|ENST00000454872|NAALADL2'] 79763 14268 PHVAHLAL True PC9_epitope_Rep4 856.49192168612 856.49082993586 62.784 2 -0.8390911922854186 0.25421450734232237 1.0 ['ENST00000507801.1_1_4:8230952-8234403:+|nuORF'] 15873 13729 EDMYWRRMEEQ True H1975_Epitope_Rep2 1571.64969783231 1571.6486099358601 57.955 2 -0.8391603341359033 0.2542537676227516 1.0 ['ZFR|p.E674Q|2|0.25|ENSG00000056097|chr5:32390397-32390397|C/G|missense_variant'] 123722 7484 VIQMECVP True PC9_epitope_Rep1 917.4350606266099 917.43396993586 33.605 2 -0.8392128978365326 0.25430005290173147 1.0 ['ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 4902 18803 ALGLANFNAI True PC9_epitope_Rep2 1002.5498304850599 1002.54872993586 77.698 2 -0.8392205321823292 0.25430005290173147 1.0 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 92454 13094 RQWKKYDF True PC9_epitope_Rep4 1169.5981776598098 1169.59654490379 58.259 3 -0.8392400791357846 0.25430005290173147 1.0 ['ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 4908 6913 ALGPKGDRGFP True H1975_Epitope_Rep3 1113.5930922793698 1113.59198993586 31.551 2 -0.8392661949320009 0.2543107145920906 1.0 ['ENSG00000188153|ENST00000328300|COL4A5', 'nc|ENSG00000188153|P29400|COL4A5', 'ENST00000483338.1_1_X:107826116-107869594:+|nuORF'] 35964 6523 GVATYAAAV True PC9_epitope_Rep4 821.4283183700499 821.4272299358599 32.213 2 -0.8393228834278966 0.25432137597758175 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1', 'ENST00000485265.1_1_3:41277322-41278230:+|nuORF'] 127535 23270 VQVLRRTPRT True PC9_epitope_Rep4 1224.7414878485597 1224.74038993586 97.76 2 -0.839405884638886 0.25436063136223264 1.0 ['nc|ENSG00000121440|Q9UPQ7-3|PDZRN3', 'PDZRN3|p.H870Afs*142|1|0.12|ENSG00000121440|chr3:73383959-73383960|-/T|frameshift_variant', 'ENSG00000121440|ENST00000263666|PDZRN3'] 84329 12542 QFPGNSVAP True PC9_epitope_Rep5 915.4450310633499 915.4444849679301 53.242 1 -0.8394158159749859 0.2543674052894925 1.0 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 112779 7821 TPLGCYKKLIE True H1975_Epitope_Rep1 1263.6896950861499 1263.6885899358601 35.034 2 -0.839426383085389 0.2543674052894925 1.0 ['nc|ENSG00000113552|P46926-2|GNPDA1', 'ENSG00000113552|ENST00000311337|GNPDA1', 'nc|ENSG00000163281|Q8TDQ7-3|GNPDA2', 'nc|ENSG00000163281|Q8TDQ7-2|GNPDA2', 'ENSG00000163281|ENST00000295448|GNPDA2'] 62943 13700 LNDHKKNQFLK True NCI_RA007_Epitope_Rep2 1383.7622828627898 1383.76118993586 57.934 2 -0.839432445436386 0.2543674052894925 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1', 'nc|ENSG00000129534|Q6P0N0-2|MIS18BP1', 'MIS18BP1|p.I114Nfs*12|1|0.11|ENSG00000129534|chr14:45246946-45246947|-/T|frameshift_variant'] 58877 11918 LFSTKTHLS True NCI_RA007_Epitope_Rep5 1032.5603951687601 1032.55928993586 52.499 2 -0.8394523410335383 0.2543674052894925 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP', 'LNPEP|p.T971S|1|0.24|ENSG00000113441|chr5:97027779-97027779|A/T|missense_variant'] 67923 10415 LTLELEILENP True H1975_Epitope_Rep3 1282.7020335916598 1282.7009299358601 45.12 2 -0.8394537332000611 0.2543674052894925 1.0 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-2|EIF4G3'] 31729 12156 GEISHVKK True PC9_epitope_Rep1 896.50796567308 896.50686993586 51.622 2 -0.8394660314952096 0.2543674052894925 1.0 ['CON__Q3TTY5'] 38299 20074 HFMVVILL True H1975_Epitope_Rep2 970.5673951254998 970.56628993586 83.194 2 -0.839523537046113 0.2543850871299301 1.0 ['nc|ENSG00000251608|P0DN82|OR12D1'] 32824 16187 GIGKDIRAL True PC9_epitope_Rep5 941.5658149023699 941.56470993586 67.252 2 -0.8395490230236706 0.2543850871299301 1.0 ['nc|ENSG00000100342|O14791-3|APOL1', 'ENSG00000100342|ENST00000397278|APOL1', 'nc|ENSG00000100342|O14791-2|APOL1'] 98766 15394 SISGGSAVVL True PC9_epitope_Rep6 888.4916469026 888.49054993586 71.362 2 -0.839555146275758 0.2543850871299301 1.0 ['ENSG00000161509|ENST00000293190|GRIN2C'] 81017 25411 PNTVIILIG True PC9_epitope_Rep2 938.5800679841799 938.57896993586 103.43 2 -0.8396819532021698 0.2544672213168654 1.0 ['ENSG00000119396|ENST00000373840|RAB14'] 116111 13929 TVSNPTYINQ True PC9_epitope_Rep5 1135.55095268387 1135.54984993586 58.598 2 -0.839752581509591 0.25449919236102175 1.0 ['STAM2|p.M462I|1|0.33|ENSG00000115145|chr2:152120766-152120766|C/G|missense_variant'] 78608 14651 PDSFNIPGSS True PC9_epitope_Rep6 1019.45598966987 1019.45488993586 68.276 2 -0.8397647887859115 0.25449919236102175 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 134582 26505 WVVRLGGRG True PC9_epitope_Rep1 998.5773826455797 998.57628993586 107.59 2 -0.8397767066018209 0.25449919236102175 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 69643 21359 LVVPPTDAPV True PC9_epitope_Rep2 1006.5698972232999 1006.56880993586 87.626 2 -0.8397872498668578 0.25452414305726295 1.0 ['ENSG00000110799|ENST00000261405|VWF'] 138443 24217 YRETDKKKKK True PC9_epitope_Rep5 1322.7670338900596 1322.7659299358602 98.154 2 -0.839913996066196 0.2545919752998185 1.0 ['nc|ENSG00000136848|Q5VWQ8-3|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-4|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-2|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-5|DAB2IP', 'ENSG00000136848|ENST00000408936|DAB2IP'] 68590 12132 LTYLALSSTV True PC9_epitope_Rep3 1066.5910265907 1066.58992993586 51.707 2 -0.8399591639407542 0.2546096452359852 1.0 ['ENST00000375856.4_1_13:110406277-110406442:-|nuORF'] 107735 4072 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 20.748 2 -0.8399848565204334 0.2546096452359852 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 18247 5134 EISHPDRLY True H1975_Epitope_Rep2 1128.55637241748 1128.55471490379 24.825 3 -0.8399992641179124 0.2546096452359852 1.0 ['ENST00000584471.5_1_17:65375098-65375356:+|nuORF'] 116631 13740 TYHRHMRTHE True PC9_epitope_Rep1 1366.63128577658 1366.63018993586 57.697 2 -0.8400315225752188 0.2546202993010591 1.0 ['ENSG00000180532|ENST00000318203|ZSCAN4'] 82729 16929 PVPTLWNEPAE True H1975_Epitope_Rep3 1251.6135529404298 1251.6129749679299 70.692 1 -0.8400811070653933 0.25465953919158424 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 57284 9029 LEGGIDPLRP True H1975_Epitope_Rep1 1065.58185888933 1065.5807699358602 39.636 2 -0.8401802008478612 0.25467019223897663 1.0 ['ENSG00000167771|ENST00000301459|RCOR2', 'ENST00000489217.1_1_11:63679764-63680410:-|nuORF'] 9890 21720 AYNNFFRMF True PC9_epitope_Rep1 1208.5436995588 1208.5426099358601 88.379 2 -0.8402044966899677 0.25469513763828144 1.0 ['nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C', 'ENSG00000074211|ENST00000382599|PPP2R2C'] 129694 8948 VTISLATL True PC9_epitope_Rep2 816.49566965388 816.49456993586 39.775 2 -0.8402262968270702 0.2546985093398505 1.0 ['ENSG00000165186|ENST00000379361|PTCHD1', 'nc|ENSG00000165186|Q96NR3-2|PTCHD1', 'nc|ENSG00000165186|Q96NR3-3|PTCHD1'] 15889 9025 EDPSKEDPLQI True NCI_RA007_Epitope_Rep2 1269.6088614828097 1269.60776993586 39.705 2 -0.8402293716597843 0.2546985093398505 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1-ZNF346|6|fusion', 'NSD1-C11orf58|2|fusion', 'NSD1-ZNF346|5|fusion', 'NSD1-ZNF346|4|fusion', 'NSD1-C11orf58|1|fusion', 'NSD1-ZNF346|8|fusion', 'NSD1-ZNF346|3|fusion', 'NSD1-ZNF346|7|fusion', 'NSD1|p.C2138Sfs*12|1|0.47|ENSG00000165671|chr5:177292108-177292108|G/-|frameshift_variant'] 14782 17452 DWQRQLRYYWD True NCI_RA007_Epitope_Rep1 1627.75317473107 1627.7520699358602 72.019 2 -0.8402307618708168 0.2546985093398505 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 20421 7737 EPPAPVRLRK True PC9_epitope_Rep1 1161.69822605425 1161.6965849037902 34.581 3 -0.840248681550836 0.25470552085864145 1.0 ['ENSG00000275074|ENST00000611621|NUDT18'] 105123 9735 STLPKSLSL True PC9_epitope_Rep4 944.55424715916 944.55314993586 45.083 2 -0.8402689657602364 0.25470552085864145 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 32291 12028 GFSLTPSK True PC9_epitope_Rep1 835.44396843419 835.44286993586 51.126 2 -0.8403030979953965 0.254730463614017 1.0 ['ENSG00000121058|ENST00000240316|COIL', 'COIL|p.S516Yfs*6|1|0.1|ENSG00000121058|chr17:56946453-56946453|G/-|frameshift_variant'] 36114 7166 GVELRQQQLED True H1975_Epitope_Rep3 1313.6575430107298 1313.65644993586 32.538 2 -0.8403467259410627 0.2547554056564675 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 3406 20117 AGKEDIIEWLS True PC9_epitope_Rep1 1259.63976768827 1259.6386699358602 82.21 2 -0.8404017346024797 0.2548195784208646 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.R1248Pfs*56|1|0.39|ENSG00000205978|chr14:24415486-24415487|-/G|frameshift_variant', 'NYNRIN|p.D217*|1|0.16|ENSG00000205978|chr14:24408318-24408319|-/T|frameshift_variant'] 136787 5432 YIRSEDAL True NCI_RA007_Epitope_Rep3 965.4818104948898 965.48070993586 28.378 2 -0.8404094854435394 0.2548195784208646 1.0 ['nc|ENSG00000080802|O95628-6|CNOT4', 'nc|ENSG00000080802|O95628-8|CNOT4', 'nc|ENSG00000080802|O95628-4|CNOT4', 'nc|ENSG00000080802|O95628-9|CNOT4', 'ENSG00000080802|ENST00000541284|CNOT4', 'nc|ENSG00000080802|O95628-5|CNOT4', 'nc|ENSG00000080802|O95628-3|CNOT4', 'nc|ENSG00000080802|O95628-2|CNOT4', 'nc|ENSG00000080802|O95628|CNOT4', 'nc|ENSG00000080802|O95628-7|CNOT4'] 19902 7711 ELWRKNYNNTW True PC9_epitope_Rep2 1522.7317110104996 1522.73005490379 35.036 3 -0.840485773149551 0.2548302275065737 1.0 ['nc|ENSG00000143061|O75054-2|IGSF3', 'ENSG00000143061|ENST00000369486|IGSF3'] 132674 7203 VYRKMLIGR True NCI_RA007_Epitope_Rep4 1134.6695687782596 1134.6679349037902 34.335 3 -0.8405203126837894 0.2548408762879232 1.0 ['ENST00000227756.4_1_11:11292512-11292662:-|nuORF'] 125573 7365 VLYQSSRDKK True H1975_Epitope_Rep1 1222.6669854956197 1222.6658899358602 33.336 2 -0.8406263229383952 0.25489439538140557 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 111659 12163 TLPDANTDFYY True H1975_Epitope_Rep1 1318.5717476981001 1318.57064993586 51.803 2 -0.8406385154359384 0.2549050429414539 1.0 ['ENSG00000102543|ENST00000251108|CDADC1'] 108168 7262 TDSRIRKL True H1975_Epitope_Rep1 987.58252759567 987.58142993586 32.943 2 -0.840668682161991 0.25491204755576513 1.0 ['ENST00000606367.1_1_6:31165433-31165721:-|nuORF'] 127308 6346 VQLTHCYCR True NCI_RA007_Epitope_Rep2 1121.5110195315299 1121.50992993586 29.29 2 -0.8406934274056554 0.25491204755576513 1.0 ['ENST00000357066.7_1_19:2071060-2071678:-|nuORF'] 123448 5997 VIEQMKEQHHR True H1975_Epitope_Rep1 1433.71976642781 1433.7186699358601 28.138 2 -0.8407056411126921 0.2549226944071333 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 58432 6491 LEWDMEKEL True PC9_epitope_Rep2 1191.5481758025498 1191.54652490379 30.381 3 -0.840721026367802 0.25493334095423176 1.0 ['NAALADL2-ABCC5|1|fusion', 'nc|ENSG00000177694|Q58DX5-2|NAALADL2', 'ENST00000485853.5_1_3:174577149-174974391:+|nuORF', 'ENST00000473253.5_1_3:174581768-175298945:+|nuORF', 'NAALADL2|p.I703Dfs*4|1|0.12|ENSG00000177694|chr3:175755333-175755343|CCCATCCGCAT/-|frameshift_variant', 'ENSG00000177694|ENST00000454872|NAALADL2'] 130657 23552 VVAVAGTIIL True PC9_epitope_Rep6 954.61136811246 954.61026993586 103.74 2 -0.8407905465455039 0.2549367016260395 1.0 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 3169 5977 AGEEPPAQPP True H1975_Epitope_Rep3 991.4610750503098 991.45996993586 28.002 2 -0.8408040553637431 0.2549367016260395 1.0 ['ENSG00000128815|ENST00000325239|WDFY4'] 96594 3888 SELVKKQELRF True NCI_RA007_Epitope_Rep5 1375.7823496010299 1375.78069490379 21.234 3 -0.840825371892484 0.2549367016260395 1.0 ['ENSG00000188626|ENST00000563027|GOLGA8M', 'ENSG00000232653|ENST00000448387|GOLGA8N', 'ENSG00000206127|ENST00000509311|GOLGA8O'] 118389 18915 VDKYRLRRKFP True PC9_epitope_Rep6 1476.8677509908398 1476.86664993586 85.401 2 -0.8408962315923474 0.2549902124680298 1.0 ['ENSG00000100625|ENST00000216513|SIX4', 'SIX4|p.Q371Rfs*8|1|0.35|ENSG00000100625|chr14:60720196-60720197|CT/-|frameshift_variant'] 130734 5276 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep4 1029.44371111445 1029.4426099358602 26.998 2 -0.8409305538417698 0.25500085728982114 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 115593 5364 TVIECIKSP True NCI_RA007_Epitope_Rep2 988.5263181591599 988.52522993586 25.483 2 -0.8410516816933962 0.2550221460208601 1.0 ['nc|ENSG00000188158|Q6T4R5-2|NHS', 'ENSG00000188158|ENST00000676302|NHS', 'nc|ENSG00000188158|Q6T4R5-4|NHS', 'nc|ENSG00000188158|Q6T4R5-3|NHS'] 112005 13903 TLSQSVILP True PC9_epitope_Rep1 956.5542471591599 956.55314993586 58.315 2 -0.841059062492247 0.2550221460208601 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 134504 18703 WVDPILLTP True PC9_epitope_Rep6 1052.59063266788 1052.5895299358601 84.583 2 -0.8411177168973972 0.2550327899301339 1.0 ['ENST00000546388.1_1_12:56708586-56708889:-|nuORF'] 14742 16275 DVVKVLSKTTE True H1975_Epitope_Rep3 1217.68671788069 1217.68617496793 68.07 1 -0.8411282570562815 0.25504343353526115 1.0 ['ENSG00000214193|ENST00000453908|SH3D21', 'nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21'] 37941 8236 HEELRRFKESH True NCI_RA007_Epitope_Rep2 1466.7378590201001 1466.7367699358601 36.674 2 -0.8411672279237308 0.25505043289424806 1.0 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128446747-128451900:+|nuORF'] 16187 5908 EEEYPLMIMRK True NCI_RA007_Epitope_Rep3 1437.6996081468499 1437.69796490379 30.213 3 -0.8411830111896021 0.25505043289424806 1.0 ['ENST00000489282.1_1_1:59158492-59165724:-|nuORF'] 46357 13431 ITGVISPLSA True PC9_epitope_Rep2 956.5542471591599 956.55314993586 56.944 2 -0.8412477327920548 0.25508964926066147 1.0 ['ENSG00000140534|ENST00000268138|TICRR', 'nc|ENSG00000140534|Q7Z2Z1-2|TICRR'] 114517 5798 TSGLKESLT True NCI_RA007_Epitope_Rep3 934.49712620586 934.49602993586 29.784 2 -0.841345227094411 0.2551288645065432 1.0 ['ENST00000249883.9_1_3:134075208-134075304:-|nuORF'] 57649 12946 LELWVNYYIRW True PC9_epitope_Rep1 1553.80308504561 1553.80144490379 54.668 3 -0.8414266391435717 0.25516807863194135 1.0 ['nc|ENSG00000171100|Q13496-2|MTM1', 'ENSG00000171100|ENST00000370396|MTM1'] 130530 6390 VTWRNYAWVYY True PC9_epitope_Rep2 1519.7248347249101 1519.72318490379 29.986 3 -0.8414717259801212 0.2552 1.0 ['IFIT2|p.G98R|1|0.16|ENSG00000119922|chr10:89306248-89306248|G/A|missense_variant'] 120789 8401 VGCVCWARP True PC9_epitope_Rep3 989.4575274066898 989.45642993586 37.28 2 -0.8414852652786745 0.2552 1.0 ['ENST00000605589.1_1_1:184355274-184355667:-|nuORF'] 61909 23732 LLLLKMLMI True NCI_RA007_Epitope_Rep4 1086.69088138646 1086.68978993586 102.9 2 -0.8414910677473583 0.2552 1.0 ['Tigger1_dup9834|chr14:19106484-19106883:-|1.044883763241324|0.2064126540684672|2.34|491.0|14|1|anti-sense', 'Tigger1_dup11946|chr22:15828868-15829349:-|1.0861641370613664|0.126984307270513|3.1|495.0|22|2|anti-sense'] 101403 10452 SNEEWWRGKIG True H1975_Epitope_Rep1 1360.6523980606396 1360.6513099358601 45.158 2 -0.8415895468625494 0.2552212793920174 1.0 ['nc|ENSG00000185482|Q96MF2-3|STAC3', 'nc|ENSG00000185482|Q96MF2-2|STAC3', 'ENSG00000185482|ENST00000332782|STAC3'] 122026 14868 VGQLPDSSLK True H1975_Epitope_Rep3 1042.5658744720201 1042.56476993586 62.574 2 -0.8416985768441875 0.2552212793920174 1.0 ['ENSG00000138678|ENST00000264409|GPAT3', 'GPAT3|p.C306Lfs*11|1|0.11|ENSG00000138678|chr4:83597433-83597434|-/T|frameshift_variant'] 122303 23432 VGRTRFLRA True PC9_epitope_Rep3 1074.6410455312998 1074.6399499358602 95.409 2 -0.8417500149395791 0.2552747739382598 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 44999 10325 IQKSPEPEVL True NCI_RA007_Epitope_Rep5 1138.6233893481399 1138.6222899358602 46.346 2 -0.841822808860301 0.25534255185417976 1.0 ['nc|ENSG00000067369|Q12888|TP53BP1', 'ENSG00000067369|ENST00000382044|TP53BP1', 'ENST00000572085.5_1_15:43707600-43785241:-|nuORF', 'nc|ENSG00000067369|Q12888-3|TP53BP1'] 57750 10254 LENQTFRFDY True H1975_Epitope_Rep1 1331.61461556959 1331.61350993586 44.384 2 -0.841899497824207 0.2553960431397757 1.0 ['KIF2A|p.L455Ifs*30|1|0.58|ENSG00000068796|chr5:62363794-62363800|TCTCATT/-|frameshift_variant', 'nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A'] 25917 20832 FGLPPKRLWR True PC9_epitope_Rep2 1268.75059598028 1268.74948993586 85.575 2 -0.8419122402472392 0.2554209639173785 1.0 ['ENST00000261783.3_1_14:68086627-68108954:+|nuORF'] 19231 9316 ELKTVTYSL True H1975_Epitope_Rep3 1052.57537652656 1052.57426993586 40.829 2 -0.8419315148533888 0.25543159969717316 1.0 ['nc|ENSG00000137834|O43541-4|SMAD6', 'ENSG00000137834|ENST00000288840|SMAD6'] 53364 4988 KTWNGGGK True NCI_RA007_Epitope_Rep2 846.4348007328198 846.43370993586 24.025 2 -0.8419608517915508 0.2554422351731231 1.0 ['nc|ENSG00000155275|Q8IYL2-2|TRMT44'] 103980 17402 SRRKSLPS True NCI_RA007_Epitope_Rep5 929.5406627836899 929.53956993586 73.718 2 -0.84198260750709 0.25546715422302846 1.0 ['nc|ENSG00000101082|Q9H6Q3-2|SLA2', 'ENSG00000101082|ENST00000262866|SLA2'] 79064 19328 PFSLKTIE True PC9_epitope_Rep6 933.5171333744499 933.51602993586 86.994 2 -0.8420072436163248 0.25547716301522466 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 130665 17306 VVCVPLLLLP True NCI_RA007_Epitope_Rep3 1064.6667748136 1064.66566993586 75.955 2 -0.8420362525271984 0.25547716301522466 1.0 ['nc|ENSG00000164707|Q9UKG4|SLC13A4', 'ENSG00000164707|ENST00000682651|SLC13A4'] 30581 17054 GAKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 73.592 3 -0.8420400470377895 0.25547716301522466 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 135322 15363 YCPNDYHQL True H1975_Epitope_Rep2 1151.47059418819 1151.46895490379 64.252 3 -0.8420798370299423 0.25547716301522466 1.0 ['ENSG00000110031|ENST00000395074|LPXN', 'nc|ENSG00000110031|O60711-2|LPXN', 'ENST00000530561.5_1_11:58294929-58321330:-|nuORF'] 27203 21562 FLSYPTWGLV True PC9_epitope_Rep5 1181.61209638845 1181.61098993586 87.977 2 -0.8420903715024451 0.25547716301522466 1.0 ['ENSG00000072041|ENST00000266682|SLC6A15', 'nc|ENSG00000072041|Q9H2J7-3|SLC6A15'] 125272 9263 VLRMAVTRQFP True NCI_RA007_Epitope_Rep2 1316.73871096724 1316.73760993586 40.641 2 -0.8421058196234761 0.25547716301522466 1.0 ['nc|ENSG00000001626|P13569-2|CFTR', 'ENSG00000001626|ENST00000003084|CFTR', 'CFTR|p.S858Efs*38|1|0.24|ENSG00000001626|chr7:117595007-117595008|-/A|frameshift_variant', 'nc|ENSG00000001626|P13569-3|CFTR'] 57824 8488 LEPQWYRVLEK True PC9_epitope_Rep1 1459.7823496010299 1459.78069490379 37.485 3 -0.842107858701779 0.25547716301522466 1.0 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENST00000476031.1_1_1:161515507-161519517:-|nuORF'] 130165 19523 VTRRRQLF True NCI_RA007_Epitope_Rep5 1074.6410455313 1074.6399499358602 81.982 2 -0.8421469375747358 0.25547716301522466 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 131729 18425 VWVWVCLRRRL True NCI_RA007_Epitope_Rep4 1484.8550781321599 1484.85343490379 79.739 3 -0.8421575296172765 0.25547716301522466 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 99786 10158 SLGQSEEKPV True PC9_epitope_Rep2 1072.540053647 1072.53894993586 44.41 2 -0.842271322274955 0.25553064168297174 1.0 ['nc|ENSG00000189159|Q9UK76-3|JPT1', 'ARMC7-HN1|1|fusion', 'ENSG00000189159|ENST00000409753|JPT1'] 75242 9075 NPKLLSLEY True H1975_Epitope_Rep3 1075.59136094387 1075.59026993586 39.892 2 -0.8423206350011889 0.25555555555555554 1.0 ['nc|ENSG00000030304|O15146-3|MUSK', 'nc|ENSG00000030304|O15146-2|MUSK', 'ENSG00000030304|ENST00000374448|MUSK'] 58149 6549 LESFLQKYK True NCI_RA007_Epitope_Rep1 1154.6335601090198 1154.6324699358602 29.489 2 -0.8423514333446119 0.2555768187141184 1.0 ['ENSG00000130997|ENST00000511885|POLN', 'ENST00000514858.5_1_4:2082849-2194957:-|nuORF', 'ENST00000503601.1_1_4:2083186-2091962:-|nuORF'] 79448 6206 PGPLSKQGS True NCI_RA007_Epitope_Rep5 869.46068112749 869.46013496793 30.548 1 -0.8423969229972443 0.2555768187141184 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 47033 6478 IVSGKYDS True PC9_epitope_Rep5 867.43379767331 867.43270993586 29.89 2 -0.8425473046159155 0.25565885494766005 1.0 ['nc|ENSG00000069424|Q13303-4|KCNAB2', 'nc|ENSG00000069424|Q13303-2|KCNAB2', 'nc|ENSG00000069424|Q13303|KCNAB2', 'nc|ENSG00000069424|Q13303-5|KCNAB2', 'ENSG00000069424|ENST00000378083|KCNAB2'] 91272 26849 RLWLKKKHEE True PC9_epitope_Rep1 1365.78810368781 1365.78646490379 109.25 3 -0.842750004217973 0.255765797929311 1.0 ['ENSG00000117477|ENST00000367806|CCDC181', 'nc|ENSG00000117477|Q5TID7-3|CCDC181'] 136885 16041 YIYNQLRTI True PC9_epitope_Rep2 1182.6397081186199 1182.63805490379 66.957 3 -0.8427932250777057 0.255765797929311 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.Q2856Rfs*14|1|0.22|ENSG00000007174|chr17:11807876-11807876|C/-|frameshift_variant', 'DNAH9|p.R1341Gfs*27|1|0.35|ENSG00000007174|chr17:11689841-11689841|C/-|frameshift_variant', 'DNAH9|p.A1913Vfs*27|1|0.25|ENSG00000007174|chr17:11727846-11727846|C/-|frameshift_variant', 'DNAH9|p.N367Kfs*9|1|0.28|ENSG00000007174|chr17:11617604-11617605|-/A|frameshift_variant'] 59421 8412 LGLTDRCRFFI True H1975_Epitope_Rep3 1339.7070764857897 1339.7059699358601 37.34 2 -0.8428681258026194 0.2557687914096413 1.0 ['ENSG00000070061|ENST00000374647|ELP1'] 20152 14163 ENLYFTNRKVN True NCI_RA007_Epitope_Rep1 1396.7099129367598 1396.70880993586 59.125 2 -0.842889546869885 0.2557687914096413 1.0 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4', 'nc|ENSG00000119599|Q8WV16-2|DCAF4', 'DCAF4|p.G284Wfs*15|1|0.32|ENSG00000119599|chr14:72954200-72954201|-/C|frameshift_variant'] 83917 7362 QEITISSKFRG True H1975_Epitope_Rep1 1264.6775501793197 1264.67644993586 33.325 2 -0.8428908490117452 0.2557687914096413 1.0 ['nc|ENSG00000184792|Q969R2-5|OSBP2', 'nc|ENSG00000184792|Q969R2-4|OSBP2', 'nc|ENSG00000184792|Q969R2-6|OSBP2', 'nc|ENSG00000184792|Q969R2-3|OSBP2', 'nc|ENSG00000184792|Q969R2-2|OSBP2', 'ENSG00000184792|ENST00000332585|OSBP2'] 60987 24570 LLAKHLKKISV True H1975_Epitope_Rep1 1248.82817759464 1248.8265449037901 101.82 3 -0.8428941761255561 0.2557687914096413 1.0 ['chr7:22473234-22492565|113|11.54|0.09|6.98|-|0|TE_info:LTR16D1,LTR16D1_dup108,ERVL,LTR,acceptor,-,22473050,22473234|None,STEAP1B|1'] 57590 7973 LELHWDFQSWV True H1975_Epitope_Rep3 1458.69320024346 1458.6921099358601 35.641 2 -0.8429147589053388 0.2557687914096413 1.0 ['nc|ENSG00000118454|Q8N6S4-2|ANKRD13C', 'ENSG00000118454|ENST00000370944|ANKRD13C'] 85774 16028 QLWNGIISI True PC9_epitope_Rep2 1042.5811306133398 1042.58002993586 66.906 2 -0.8429255181200881 0.2557687914096413 1.0 ['nc|ENSG00000140563|Q6DN12-2|MCTP2', 'ENSG00000140563|ENST00000357742|MCTP2', 'ENST00000456504.5_1_15:94858078-95022260:+|nuORF'] 61077 5122 LLAVSHVG True PC9_epitope_Rep6 794.46503823194 794.46394993586 27.391 2 -0.8429366453713768 0.2557687914096413 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 99586 21570 SLFIHAGA True NCI_RA007_Epitope_Rep5 814.43373810366 814.43264993586 90.056 2 -0.8429769471300518 0.2557863925180267 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644'] 45323 7234 ISCVELGPRP True H1975_Epitope_Rep3 1069.5590152697698 1069.5579099358602 32.797 2 -0.8430307509646892 0.2557863925180267 1.0 ['nc|ENSG00000104946|Q9HA65-3|TBC1D17', 'nc|ENSG00000104946|Q9HA65-2|TBC1D17', 'ENSG00000104946|ENST00000221543|TBC1D17', 'ENST00000596243.5_1_19:50382536-50391878:+|nuORF'] 93516 23813 RSLRIEKFFAF True PC9_epitope_Rep3 1412.7928547150798 1412.79174993586 96.882 2 -0.8430516168180269 0.2557863925180267 1.0 ['ENSG00000090857|ENST00000288050|PDPR', 'nc|ENSG00000090857|Q8NCN5-2|PDPR'] 79753 9984 PHSVSVQCVP True PC9_epitope_Rep5 1051.5120650773501 1051.5109699358602 43.38 2 -0.8431964338146984 0.25582557541835627 1.0 ['ENST00000497410.5_1_5:863966-864239:-|nuORF'] 116156 9104 TVTEPPVRIIY True H1975_Epitope_Rep3 1286.7234377425798 1286.7223499358602 40.007 2 -0.8432890119012001 0.2558504790325114 1.0 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 28966 20120 FTFFDVQKTKY True PC9_epitope_Rep4 1422.7183523621397 1422.71724993586 85.526 2 -0.8433206575309936 0.2558607692527341 1.0 ['nc|ENSG00000109066|Q8NE00-2|TMEM104', 'ENSG00000109066|ENST00000335464|TMEM104'] 65727 11513 LSHTNSVVNP True PC9_epitope_Rep5 1066.54072235334 1066.5396299358601 49.281 2 -0.8433263768218211 0.2558607692527341 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 82756 14444 PVQPTHAPGTT True PC9_epitope_Rep3 1104.55637241748 1104.55526993586 60.664 2 -0.8433418764191692 0.2558607692527341 1.0 ['ENSG00000078081|ENST00000265598|LAMP3'] 130086 8942 VTQQINERK True NCI_RA007_Epitope_Rep4 1114.6094706195 1114.60836993586 41.229 2 -0.8433472401210463 0.2558607692527341 1.0 ['nc|ENSG00000131089|O43307-3|ARHGEF9', 'nc|ENSG00000131089|O43307-2|ARHGEF9', 'nc|ENSG00000131089|O43307|ARHGEF9', 'ENSG00000131089|ENST00000671741|ARHGEF9'] 74628 8289 NLEGELESL True PC9_epitope_Rep2 1002.48695544498 1002.48584993586 37.245 2 -0.8433518832352573 0.2558607692527341 1.0 ['nc|ENSG00000119397|Q7Z7A1-2|CNTRL', 'nc|ENSG00000119397|Q7Z7A1-5|CNTRL', 'ENSG00000119397|ENST00000373855|CNTRL', 'nc|ENSG00000119397|Q7Z7A1-4|CNTRL', 'nc|ENSG00000119397|Q7Z7A1-3|CNTRL'] 33012 18806 GIWNMFYVFYE True PC9_epitope_Rep5 1467.65330957743 1467.6522099358601 77.351 2 -0.8433843333795144 0.25586774027753983 1.0 ['FSTL5|p.G451W|1|0.35|ENSG00000168843|chr4:161500123-161500123|C/A|missense_variant'] 30810 8456 GAPQQFPYPP True H1975_Epitope_Rep2 1100.52909504048 1100.5279899358602 37.479 2 -0.8433855273085568 0.25586774027753983 1.0 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 2940 7926 AFGEPETDRTL True H1975_Epitope_Rep1 1234.5829810881398 1234.58188993586 35.438 2 -0.8434111601121371 0.25587072275913264 1.0 ['ENST00000594345.5_1_19:17447582-17447759:+|nuORF'] 50498 2135 KKKKKKKKKSF True H1975_Epitope_Rep3 1404.9656741269598 1404.96403490379 11.447 3 -0.8434775210845499 0.25587072275913264 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 12170 8750 DIKPEKISDP True H1975_Epitope_Rep3 1140.60265390356 1140.60154993586 38.661 2 -0.8434899285555968 0.25587072275913264 1.0 ['ENSG00000174844|ENST00000495027|DNAH12'] 56461 16892 LDSTCSST True NCI_RA007_Epitope_Rep5 812.3221986190001 812.32110993586 71.732 2 -0.8435024164368232 0.25587072275913264 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 115498 14278 TVGGLILEKPV True H1975_Epitope_Rep3 1124.6805103014399 1124.6794099358601 60.263 2 -0.8435138451077486 0.25587072275913264 1.0 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 52215 8682 KMRAFQCLR True PC9_epitope_Rep2 1151.6055886227098 1151.60395490379 38.76 3 -0.8435253618783479 0.25587072275913264 1.0 ['ENST00000504771.2_1_5:118729947-118730076:+|nuORF'] 109098 19321 TFFQEQLVE True PC9_epitope_Rep5 1139.5498900547097 1139.5487899358602 79.362 2 -0.8435371946105368 0.25587072275913264 1.0 ['GOLGA4|p.L1153F|1|0.09|ENSG00000144674|chr3:37325343-37325343|C/T|missense_variant'] 129020 3668 VTAAHCVEKP True NCI_RA007_Epitope_Rep4 1053.52771514149 1053.52660993586 20.213 2 -0.8435545119773377 0.25587404002626546 1.0 ['ENSG00000184012|ENST00000332149|TMPRSS2', 'nc|ENSG00000184012|O15393-2|TMPRSS2'] 58788 13351 LFPEVRFPAPR True NCI_RA007_Epitope_Rep2 1327.7400908662298 1327.7389899358602 56.57 2 -0.8435562804748331 0.25587404002626546 1.0 ['ENST00000542575.6_2_19:47291354-47291816:-|nuORF'] 64686 20398 LRKTRLDAPR True NCI_RA007_Epitope_Rep4 1224.74148784856 1224.74038993586 88.322 2 -0.8435678208544448 0.25587404002626546 1.0 ['nc|ENSG00000091542|Q6P6C2-3|ALKBH5', 'ENSG00000091542|ENST00000399138|ALKBH5', 'nc|ENSG00000091542|Q6P6C2-1|ALKBH5'] 63827 14662 LPTDAGVYVC True H1975_Epitope_Rep1 1036.4899326504399 1036.4888299358602 61.612 2 -0.843645512827643 0.2559238323626813 1.0 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1'] 5516 9890 ANASKWSP True H1975_Epitope_Rep2 859.41881631551 859.41770993586 43.03 2 -0.8436534802819237 0.2559238323626813 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-3|ZFYVE19', 'ENST00000560078.1_1_15:41101513-41102320:+|nuORF', 'ENST00000439365.6_2_19:47543749-47548643:+|nuORF'] 78133 15556 PAPGLRPEEAP True H1975_Epitope_Rep2 1132.58767254576 1132.58656993586 64.992 2 -0.8437165154071944 0.2559450740814754 1.0 ['ENSG00000164379|ENST00000296839|FOXQ1'] 3059 14157 AGAAASSAADP True PC9_epitope_Rep5 887.3984747937499 887.39736993586 59.466 2 -0.8437308385624912 0.2559450740814754 1.0 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000469930.1_1_7:140534396-140624503:-|nuORF'] 91169 10747 RLPTPEQI True PC9_epitope_Rep1 952.5341804209199 952.53308993586 46.226 2 -0.8438717075259646 0.2559483878334594 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 128920 9712 VSTPSQPL True PC9_epitope_Rep6 827.4388830537499 827.43778993586 47.757 2 -0.8438761499719327 0.2559483878334594 1.0 ['ENSG00000162460|ENST00000375782|TMEM82'] 64967 10753 LSDDFREDPV True H1975_Epitope_Rep3 1191.5407819229902 1191.53968993586 46.44 2 -0.8438848307266442 0.2559483878334594 1.0 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF'] 44393 10575 INEHDYAKA True PC9_epitope_Rep6 1059.4985231881901 1059.49742993586 51.485 2 -0.8439619162978276 0.2559875538808484 1.0 ['ENSG00000104412|ENST00000220853|EMC2', 'ENST00000520294.5_1_8:109476316-109498824:+|nuORF'] 83381 4939 QARQPWRWKE True PC9_epitope_Rep3 1383.71600137671 1383.71434490379 24.091 3 -0.8440213064391163 0.2559981730728059 1.0 ['ENST00000552692.5_1_12:56122103-56122145:-|nuORF', 'ENST00000257857.8_1_12:56122103-56122892:-|nuORF'] 87190 8101 QSLHLQKNQLR True NCI_RA007_Epitope_Rep1 1363.76843087239 1363.76677490379 35.51 3 -0.8440765561250082 0.25600879196163506 1.0 ['nc|ENSG00000100399|Q6NUI6-2|CHADL', 'ENSG00000100399|ENST00000216241|CHADL'] 62707 16459 LLWYKRTRVKR True PC9_epitope_Rep6 1517.9306856005699 1517.9290349037901 75.723 3 -0.8441622865220814 0.2560154131582703 1.0 ['ENST00000473125.5_1_15:34697252-34699017:-|nuORF'] 39131 17952 HLDLWFYFTL True PC9_epitope_Rep5 1353.6757592741696 1353.67466993586 74.068 2 -0.8441628180904224 0.2560154131582703 1.0 ['CLN6|p.H144Tfs*19|1|0.19|ENSG00000128973|chr15:68211731-68211731|G/-|frameshift_variant', 'ENSG00000128973|ENST00000249806|CLN6', 'nc|ENSG00000128973|Q9NWW5-2|CLN6'] 78759 10682 PEICLTTWGP True H1975_Epitope_Rep3 1115.53213181559 1115.53102993586 46.164 2 -0.8441812312806729 0.2560154131582703 1.0 ['ENST00000504636.1_1_5:87565907-87566030:+|nuORF'] 138130 8445 YQKWKFEKYYE True PC9_epitope_Rep3 1610.77692986742 1610.77473987172 37.446 4 -0.8441847529822738 0.2560154131582703 1.0 ['ENSG00000136542|ENST00000259056|GALNT5'] 65841 10250 LSKPADWNLP True H1975_Epitope_Rep3 1139.59750895347 1139.59640993586 44.475 2 -0.844189406162046 0.2560154131582703 1.0 ['ENST00000569860.1_1_2:12856079-12856172:+|nuORF'] 46452 7492 ITLTLDDEAA True PC9_epitope_Rep1 1060.52882025696 1060.5277299358602 33.637 2 -0.844196313640478 0.2560154131582703 1.0 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5', 'CNTNAP5|p.V793Sfs*37|1|0.31|ENSG00000155052|chr2:124763992-124763992|C/-|frameshift_variant'] 79531 6392 PGRTSDSPW True PC9_epitope_Rep4 1001.4566583762099 1001.45556993586 31.677 2 -0.8442216426580773 0.25602603074024916 1.0 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant', 'ENST00000522327.1_1_8:103372297-103373424:-|nuORF'] 134491 5526 WTWCQWERAVW True H1975_Epitope_Rep3 1549.69248905081 1549.6913899358601 26.303 2 -0.8442769985287766 0.25607580665877017 1.0 ['ENST00000304987.3_1_11:111596525-111596654:+|nuORF'] 20348 6204 EPGKLKTNSQP True NCI_RA007_Epitope_Rep1 1197.63535101417 1197.6337049037902 28.167 3 -0.8442869270484332 0.25607580665877017 1.0 ['ENSG00000101871|ENST00000317552|MID1', 'nc|ENSG00000101871|O15344-2|MID1'] 15257 9786 EAGPEVDPEE True H1975_Epitope_Rep3 1070.44039917538 1070.4393099358601 42.666 2 -0.8442933916548497 0.2560860755158538 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 93342 10167 RRTPRALSAHP True H1975_Epitope_Rep3 1260.7163357298798 1260.7152299358602 44.151 2 -0.8443831170542739 0.2560860755158538 1.0 ['ENST00000328024.10_1_19:8468676-8469162:+|nuORF'] 127415 14875 VQRITTELKR True NCI_RA007_Epitope_Rep1 1242.7408191422198 1242.73918490379 61.919 3 -0.8443922217208923 0.2560860755158538 1.0 ['ONECUT1|p.A298V|1|0.14|ENSG00000169856|chr15:52788992-52788992|G/A|missense_variant'] 10300 15408 CHDGDETI True PC9_epitope_Rep1 888.3283466286 888.32724993586 64.085 2 -0.8444096734480367 0.2560860755158538 1.0 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 137537 21843 YLREMRVH True PC9_epitope_Rep6 1102.5705830129798 1102.56948993586 96.921 2 -0.8444280537190758 0.2560860755158538 1.0 ['ENST00000457422.6_1_17:42755944-42756196:-|nuORF'] 65619 14010 LSGLSWERSR True PC9_epitope_Rep5 1189.62036965637 1189.61926993586 58.907 2 -0.8444780094121037 0.25612157534246577 1.0 ['ENST00000299498.10_1_11:7694653-7694722:-|nuORF'] 42926 10685 IFWNKYFPPFY True NCI_RA007_Epitope_Rep2 1520.7492585676 1520.74816993586 46.164 2 -0.8444787322309928 0.25612157534246577 1.0 ['ENST00000519374.5_1_5:172461698-172461947:+|nuORF'] 2735 4368 AETTLALKEHS True H1975_Epitope_Rep3 1198.61936659686 1198.61773490379 21.921 3 -0.8444862982111637 0.25614645909733025 1.0 ['FOXN1|p.G146E|1|0.16|ENSG00000109101|chr17:28524816-28524816|G/A|missense_variant'] 76674 10691 NTLERREKHEK True H1975_Epitope_Rep1 1438.7640737679396 1438.7629699358602 46.082 2 -0.8446230407642571 0.25617134214206216 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 134264 17510 WRRRRRPQ True NCI_RA007_Epitope_Rep5 1209.7067741056899 1209.70513490379 74.143 3 -0.8446888201093925 0.25617759516064603 1.0 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 69792 16878 LWRQRQQWQER True H1975_Epitope_Rep2 1612.8334907404399 1612.8323899358602 70.167 2 -0.8447233850765734 0.25617759516064603 1.0 ['TCHH|p.E179Q|1|0.2|ENSG00000159450|chr1:152112682-152112682|C/G|missense_variant'] 87192 22131 QSLIPFVQL True PC9_epitope_Rep4 1043.60153170475 1043.60097496793 93.344 1 -0.8447935828961699 0.25617759516064603 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'nc|ENSG00000122512|P54278-2|PMS2', 'nc|ENSG00000122512|P54278-3|PMS2'] 137708 22232 YMQDYWRTWLK True PC9_epitope_Rep3 1588.7496695737598 1588.7485699358601 90.8 2 -0.844801218210738 0.25617759516064603 1.0 ['nc|ENSG00000211584|Q6P1K1-2|SLC48A1', 'ENSG00000211584|ENST00000442218|SLC48A1'] 130625 22022 VVAGRRKS True PC9_epitope_Rep1 871.53518348043 871.53408993586 89.526 2 -0.8448045728468055 0.25617759516064603 1.0 ['ENSG00000151952|ENST00000422113|TMEM132D', 'TMEM132D|p.Q218H|1|0.14|ENSG00000151952|chr12:129700124-129700124|C/G|missense_variant'] 3265 3295 AGFHIYSLWMK True NCI_RA007_Epitope_Rep2 1351.6747137283498 1351.6730549037902 17.481 3 -0.8448097438906303 0.25617759516064603 1.0 ['NLRP5|p.H629Y|1|0.15|ENSG00000171487|chr19:56028118-56028118|C/T|missense_variant'] 82728 16600 PVPTLWNEPAE True H1975_Epitope_Rep3 1251.6135529404298 1251.6129749679299 69.35 1 -0.8448122924660686 0.25617759516064603 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 19136 28594 ELIPLIYLE True H1975_Epitope_Rep2 1101.6321631266899 1101.63106993586 119.82 2 -0.844813126840357 0.25617759516064603 1.0 ['PZP|p.I1373Sfs*13|1|0.39|ENSG00000126838|chr12:9152829-9152829|G/-|frameshift_variant', 'ENSG00000126838|ENST00000261336|PZP', 'PZP|p.P260Qfs*6|1|0.3|ENSG00000126838|chr12:9197100-9197100|G/-|frameshift_variant', 'PZP|p.T1230Nfs*10|1|0.38|ENSG00000126838|chr12:9154701-9154702|-/T|frameshift_variant', 'nc|ENSG00000126838|P20742-2|PZP'] 106629 9542 SWRRRWQHRYW True H1975_Epitope_Rep3 1715.86579392823 1715.86414490379 41.712 3 -0.8448534405157764 0.25617759516064603 1.0 ['ENST00000570069.5_1_16:1826945-1827407:+|nuORF', 'ENST00000561903.6_1_16:1826945-1828699:+|nuORF'] 130166 20012 VTRRRQLF True NCI_RA007_Epitope_Rep5 1074.6410455313 1074.6399499358602 83.893 2 -0.8448633261948826 0.25617759516064603 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 10337 21487 CIKLQAFV True PC9_epitope_Rep4 920.5153595526399 920.5142699358599 90.836 2 -0.8448893859443444 0.2561845521727965 1.0 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM'] 3017 22890 AFRRQPRA True PC9_epitope_Rep3 1000.5678805910399 1000.56678993586 93.313 2 -0.8448945082814858 0.2561845521727965 1.0 ['ENSG00000142082|ENST00000382743|SIRT3'] 101120 17738 SLVFHLTQFMP True PC9_epitope_Rep2 1318.6743793751798 1318.67328993586 73.51 2 -0.8449735094340989 0.25620907573574514 1.0 ['ENST00000228825.11_1_12:110874003-110874424:-|nuORF'] 75201 21824 NNWRWRGWRRP True PC9_epitope_Rep2 1582.8130300793796 1582.81192993586 89.419 2 -0.844983679271264 0.25620907573574514 1.0 ['ENST00000463681.1_1_2:61404673-61406216:+|nuORF', 'ENST00000357022.6_2_2:61404673-61404988:+|nuORF'] 38133 23833 HEQIRELTAS True NCI_RA007_Epitope_Rep5 1182.59929985862 1182.59764490379 99.04 3 -0.8449839226011081 0.25620907573574514 1.0 ['ENST00000537553.5_1_12:30863433-30867904:-|nuORF'] 46299 7293 ITEM[Oxidation]EPSPVEI True H1975_Epitope_Rep3 1259.5955202982298 1259.59442993586 33.027 2 -0.8449924339328554 0.25620907573574514 1.0 ['ENSG00000205108|ENST00000378788|FAM205A', 'nc|ENSG00000257198|Q63HN1|SPATA31F2P'] 22756 5967 EVAQTPKHLVR True NCI_RA007_Epitope_Rep5 1276.72516907808 1276.7235149037901 29.636 3 -0.8450136890581589 0.25620907573574514 1.0 ['nc|ENSG00000275243|A0A087WV62|TRBV16'] 2613 10956 AESLSNLHLKE True H1975_Epitope_Rep1 1239.6459156978701 1239.6448099358602 47.106 2 -0.845028405146828 0.2562339514978602 1.0 ['nc|ENSG00000260537|Q9UMR2-2|DDX19B', 'ENSG00000157349|ENST00000288071|DDX19B'] 14740 16306 DVVKVLSKTTE True H1975_Epitope_Rep1 1217.68671788069 1217.68617496793 68.078 1 -0.8450393085279941 0.2562445614185247 1.0 ['ENSG00000214193|ENST00000453908|SH3D21', 'nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21'] 65473 17688 LSFHKAKAP True PC9_epitope_Rep1 997.5709002828099 997.56980993586 72.831 2 -0.8451138504077463 0.2562551710364897 1.0 ['KLF8|p.P94A|1|0.1|ENSG00000102349|chrX:56265378-56265378|C/G|missense_variant'] 134973 9927 YAFWGAASF True PC9_epitope_Rep6 1018.4548674710599 1018.45376993586 48.702 2 -0.8451827273072471 0.25628004507653024 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 106370 4547 SVSPASTLK True NCI_RA007_Epitope_Rep4 888.4916469026 888.49054993586 23.893 2 -0.845246376092681 0.2562906538856556 1.0 ['ENST00000497039.1_1_2:65298581-65300050:+|nuORF', 'nc|ENSG00000011523|Q76N32-2|CEP68', 'ENSG00000011523|ENST00000377990|CEP68'] 130959 17718 VVITTLTTL True NCI_RA007_Epitope_Rep1 959.59029831471 959.58920993586 73.057 2 -0.845322335989533 0.25630090287980145 1.0 ['ENSG00000168830|ENST00000305344|HTR1E'] 67007 9340 LTAIPFWYHM True PC9_epitope_Rep6 1277.62670090677 1277.6256099358602 46.111 2 -0.8453261841241112 0.25630090287980145 1.0 ['EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion', 'nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 118741 8438 VEDKMKLFPV True H1975_Epitope_Rep1 1204.65258130144 1204.6509449037899 37.382 3 -0.8453550015426607 0.25630090287980145 1.0 ['nc|ENSG00000204956|Q9Y5H4-2|PCDHGA1', 'ENSG00000204956|ENST00000517417|PCDHGA1', 'PCDHGA1|p.P450Qfs*25|2|0.38|ENSG00000204956|chr5:141332030-141332030|C/-|frameshift_variant'] 16226 12898 EEFWLFCPLRW True H1975_Epitope_Rep1 1524.7223921967598 1524.72128993586 54.684 2 -0.8453589383986536 0.25630090287980145 1.0 ['ENST00000335281.8_1_14:52434561-52434765:+|nuORF'] 136258 12059 YGSADLPSSIH True PC9_epitope_Rep1 1145.5353026197301 1145.5342099358602 51.244 2 -0.8453809524613088 0.25630090287980145 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 41842 19745 IDTEEFFVKYK True NCI_RA007_Epitope_Rep2 1417.71293262853 1417.7118299358601 81.762 2 -0.8454956367294983 0.25634003708458136 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'CHD9|p.W1426Mfs*3|1|0.15|ENSG00000177200|chr16:53263047-53263048|-/A|frameshift_variant'] 59482 12254 LGPAYLRLGP True H1975_Epitope_Rep1 1055.61276509479 1055.6116699358602 52.158 2 -0.8455995328365835 0.2563934332701003 1.0 ['ENSG00000162461|ENST00000294454|SLC25A34'] 105859 19447 SVKIHTLKI True PC9_epitope_Rep1 1037.65971528721 1037.65860993586 79.617 2 -0.8456185758724182 0.25640403925148336 1.0 ['ENST00000598377.2_2_19:53715316-53715451:+|nuORF'] 117571 7853 VAGKVVKG True H1975_Epitope_Rep3 756.4857736765199 756.48466993586 35.182 2 -0.8456292988234855 0.2564109878198363 1.0 ['nc|ENSG00000155090|Q13118-4|KLF10'] 20513 9600 EPVRTERRNEK True H1975_Epitope_Rep1 1412.7484237037995 1412.74732993586 41.851 2 -0.8456408907552448 0.2564109878198363 1.0 ['ENST00000428457.1_1_7:47316856-47317057:-|nuORF'] 37829 8052 HDHRHAGNKP True PC9_epitope_Rep1 1167.56458611575 1167.5634899358602 35.794 2 -0.8457268782664168 0.2564212267716311 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611', 'nc|ENSG00000189190|Q6ZNG1|ZNF600', 'ENSG00000189190|ENST00000692063|ZNF600', 'ENSG00000198482|ENST00000359798|ZNF808', 'nc|ENSG00000198482|Q8N4W9-2|ZNF808'] 30236 9719 GAAAQQVVD True PC9_epitope_Rep2 857.4242956187699 857.42318993586 42.725 2 -0.8457306046791261 0.2564212267716311 1.0 ['ENSG00000148671|ENST00000372013|ADIRF'] 107478 4202 TAAEIEESPS True NCI_RA007_Epitope_Rep5 1032.46113461996 1032.4600299358601 22.695 2 -0.8457569420334488 0.2564212267716311 1.0 ['MAGEB4|p.K35I|1|0.09|ENSG00000120289|chrX:30242239-30242239|A/T|missense_variant'] 73217 4161 NEGTLESINEK True H1975_Epitope_Rep3 1232.5884603913998 1232.5873699358601 21.124 2 -0.8457884044354884 0.2564212267716311 1.0 ['ENSG00000151657|ENST00000379562|KIN', 'nc|ENSG00000151657|O60870-2|KIN'] 130960 17814 VVITTLTTL True NCI_RA007_Epitope_Rep1 959.59029831471 959.58920993586 73.43 2 -0.8457979113914172 0.2564212267716311 1.0 ['ENSG00000168830|ENST00000305344|HTR1E'] 42388 12395 IENLAREELQK True NCI_RA007_Epitope_Rep1 1341.7252286477299 1341.7241299358602 52.19 2 -0.8458617639806751 0.25645669628214085 1.0 ['nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-2|SKOR1'] 18343 8732 EIWEKTM[Oxidation]WPPT True H1975_Epitope_Rep3 1432.6696882979998 1432.6685899358602 38.591 2 -0.8458672889232429 0.25645669628214085 1.0 ['ENST00000306562.7_1_1:249142917-249143094:+|nuORF'] 112535 2700 TPAGVATVNR True PC9_epitope_Rep1 984.53524305008 984.53414993586 14.805 2 -0.8459074147588517 0.2564672998488349 1.0 ['nc|ENSG00000237864|Q6ZN03|LINC00322'] 81515 9571 PQSLIICN True PC9_epitope_Rep1 886.45823859934 886.45714993586 41.672 2 -0.8459619632623195 0.25649216376937667 1.0 ['ENST00000274496.9_1_5:143549505-143550149:-|nuORF'] 61567 13571 LLGLPEDYLY True NCI_RA007_Epitope_Rep5 1194.61724133854 1194.6161499358602 58.889 2 -0.8459908554005019 0.2565027665278649 1.0 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'nc|ENSG00000131747|P11388-4|TOP2A'] 24978 3533 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 19.592 2 -0.8460591530282501 0.2565129974760798 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 74830 20324 NLPKKHPLF True PC9_epitope_Rep2 1092.64439957624 1092.64330993586 83.599 2 -0.8460647804616306 0.2565129974760798 1.0 ['ENST00000569782.2_1_16:31520289-31520549:+|nuORF'] 137337 20887 YLIYLSQHTPV True PC9_epitope_Rep5 1332.7077876784401 1332.7061549037899 85.395 3 -0.8460650373360928 0.2565129974760798 1.0 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 129755 4870 VTKKVKIRK True PC9_epitope_Rep5 1098.76009803482 1098.7590099358601 23.774 2 -0.8460732405425411 0.2565129974760798 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 138637 17855 YRRLREKP True H1975_Epitope_Rep2 1116.651610215 1116.65050993586 74.0 2 -0.8460827242075112 0.2565129974760798 1.0 ['nc|ENSG00000104365|O14920-4|IKBKB', 'nc|ENSG00000104365|O14920-2|IKBKB', 'ENSG00000104365|ENST00000520810|IKBKB', 'ENST00000342222.6_1_8:42151073-42188494:+|nuORF'] 43991 10747 ILHDIETVF True NCI_RA007_Epitope_Rep3 1085.57571087973 1085.57460993586 49.32 2 -0.8461050672103909 0.25652359903037214 1.0 ['ENST00000216297.6_1_14:21820582-21820828:-|nuORF'] 121930 14448 VGPPSPFP True PC9_epitope_Rep3 796.41194002992 796.41084993586 60.679 2 -0.8461111262224454 0.2565305424057492 1.0 ['nc|ENSG00000142611|Q9HAZ2-2|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-3|PRDM16', 'ENSG00000142611|ENST00000270722|PRDM16', 'ENST00000607632.1_1_1:2985775-3103053:+|nuORF', 'PRDM16|p.G651Afs*33|1|0.13|ENSG00000142611|chr1:3412145-3412145|G/-|frameshift_variant'] 43575 6035 IIFAPCLL True NCI_RA007_Epitope_Rep5 888.51429692348 888.5131899358599 29.895 2 -0.8461173163968411 0.2565305424057492 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 18617 8927 ELAKTYLECKE True H1975_Epitope_Rep3 1325.65370350025 1325.65260993586 39.335 2 -0.846135428882282 0.2565411432563843 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 41695 10291 IDLGFGTK True H1975_Epitope_Rep3 849.45961849833 849.4590749679301 44.635 1 -0.8461894216649097 0.2566087774831038 1.0 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 66829 10203 LSVRDPAGAP True PC9_epitope_Rep5 981.5243440132098 981.52324993586 44.235 2 -0.8462337791916857 0.25661571803353483 1.0 ['ENST00000380752.9_1_13:30127969-30169614:-|nuORF'] 74076 5241 NHTYKIIRV True NCI_RA007_Epitope_Rep4 1142.6560268890998 1142.65438490379 26.698 3 -0.8462406511451694 0.25661571803353483 1.0 ['ENST00000425263.5_1_2:44586875-44586968:-|nuORF'] 90653 24112 RKKRKKLKKR True NCI_RA007_Epitope_Rep1 1367.9677398156298 1367.96608490379 99.876 3 -0.8462870782200294 0.2566226581881434 1.0 ['ENSG00000230453|ENST00000684830|ANKRD18B', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B'] 59278 20839 LGGTGWGF True PC9_epitope_Rep1 793.3758888743699 793.37534496793 84.986 1 -0.8463170536477791 0.2566226581881434 1.0 ['ENSG00000114948|ENST00000264377|ADAM23', 'ENST00000587773.1_1_17:42854566-42857119:+|nuORF', 'ENSG00000073670|ENST00000200557|ADAM11'] 66747 7001 LSTSTVSQSL True PC9_epitope_Rep1 1021.52915461013 1021.5280499358599 31.734 2 -0.8463421360618316 0.25662593917965243 1.0 ['SMG1|p.L1340S|1|0.1|ENSG00000157106|chr16:18859116-18859116|A/G|missense_variant'] 7586 5134 ASHCPCLPK True NCI_RA007_Epitope_Rep4 954.44154298938 954.44044993586 26.266 2 -0.8463548628835762 0.25662593917965243 1.0 ['ENST00000527426.1_1_11:47405038-47417061:-|nuORF'] 47133 8443 IWETFRRWHQK True NCI_RA007_Epitope_Rep2 1585.82661445485 1585.82497490379 37.483 3 -0.8463663584553205 0.25662593917965243 1.0 ['ENST00000467796.5_1_22:51221718-51237143:+|nuORF', 'ENST00000480246.1_1_22:51222460-51237143:+|nuORF'] 128179 24449 VRSVIGGG True H1975_Epitope_Rep1 743.4289870763898 743.42843496793 101.35 1 -0.8464607848476712 0.2566434762773723 1.0 ['nc|ENSG00000073146|Q9BXT6-5|MOV10L1'] 55464 11864 LAVCHGSS True PC9_epitope_Rep3 772.3537735308 772.35266993586 50.653 2 -0.846466913588223 0.2566434762773723 1.0 ['ENSG00000148513|ENST00000361713|ANKRD30A', 'ANKRD30A|p.S889Lfs*9|1|0.15|ENSG00000148513|chr10:37197430-37197430|C/-|frameshift_variant', 'ANKRD30A|p.P553Hfs*39|1|0.25|ENSG00000148513|chr10:37152070-37152070|C/-|frameshift_variant'] 124961 13455 VLMSLAFSFLM True PC9_epitope_Rep5 1257.6501387732899 1257.6484949037902 56.77 3 -0.8464720808826182 0.2566434762773723 1.0 ['ENSG00000114395|ENST00000425346|CYB561D2'] 71032 5032 MESRPPPPP True H1975_Epitope_Rep1 1006.4906013567798 1006.48950993586 24.425 2 -0.8464751479650621 0.25664675609790866 1.0 ['ENST00000430014.1_1:144520944-144521145:-|nuORF'] 82911 6038 PWATVNRLQ True NCI_RA007_Epitope_Rep4 1083.58252759567 1083.5814299358601 29.842 2 -0.8464918323239123 0.25664675609790866 1.0 ['ENST00000254508.6_1_3:13358488-13358665:-|nuORF'] 124992 19866 VLNRCSEINK True PC9_epitope_Rep3 1174.61284174778 1174.6117499358602 81.651 2 -0.8464971541889532 0.25664675609790866 1.0 ['ENSG00000156017|ENST00000376834|CARNMT1'] 48178 17101 KAVARPELL True PC9_epitope_Rep4 995.6127650947898 995.61166993586 73.784 2 -0.8465239671574984 0.2566716085989622 1.0 ['nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 68165 11098 LTPSSKLTV True PC9_epitope_Rep3 944.55424715916 944.55314993586 47.685 2 -0.8465981402796258 0.2567392265035852 1.0 ['ENSG00000198455|ENST00000374888|ZXDB', 'ENSG00000198205|ENST00000358697|ZXDA'] 13489 12382 DPEEEEPVYI True PC9_epitope_Rep2 1218.5292141797797 1218.5281099358601 52.937 2 -0.8466160578813711 0.25678526627893716 1.0 ['ENSG00000144460|ENST00000272907|NYAP2', 'nc|ENSG00000144460|Q9P242|NYAP2', 'NYAP2|p.K316Rfs*57|2|0.13|ENSG00000144460|chr2:225582356-225582356|C/-|frameshift_variant'] 24859 4120 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 20.971 2 -0.8466205937224355 0.25678526627893716 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 79047 13938 PFQHHRHQI True PC9_epitope_Rep1 1198.61080803218 1198.60915490379 58.448 3 -0.8466392003768168 0.25678526627893716 1.0 ['ENST00000454520.6_1_12:50384572-50385828:-|nuORF'] 12811 11553 DLKDVLKAL True NCI_RA007_Epitope_Rep3 1013.6120963884499 1013.61098993586 52.574 2 -0.8466856993567689 0.2567958604763873 1.0 ['ENST00000488374.5_1_3:167517863-167543108:+|nuORF', 'SERPINI1|p.L333Sfs*13|1|0.14|ENSG00000163536|chr3:167822997-167822998|-/T|frameshift_variant', 'ENSG00000163536|ENST00000446050|SERPINI1'] 129756 4968 VTKKVKIRK True PC9_epitope_Rep5 1098.76009803482 1098.7590099358601 24.144 2 -0.8467641879653844 0.2568064543718106 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 5347 17579 ALSVSTPEHL True PC9_epitope_Rep4 1052.55022440788 1052.54912993586 75.636 2 -0.8468009254510499 0.25681704796521987 1.0 ['ENSG00000159640|ENST00000290866|ACE', 'nc|ENSG00000159640|P12821-2|ACE', 'ENST00000582678.5_1_17:61557143-61562826:+|nuORF'] 69184 25592 LVMCIVLRP True PC9_epitope_Rep5 1042.6031290112198 1042.6020299358602 103.75 2 -0.8468660036902388 0.25685614915331545 1.0 ['ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 62678 18601 LLWGEEILLTV True PC9_epitope_Rep1 1284.73293979712 1284.73184993586 76.337 2 -0.8469370127300122 0.2568809954815628 1.0 ['ENST00000531162.5_1_14:95600723-95607049:-|nuORF'] 118736 17522 VEDFQGGNKIE True PC9_epitope_Rep5 1234.5829810881398 1234.58188993586 72.404 2 -0.8469491307700048 0.2568915875595085 1.0 ['ENSG00000128052|ENST00000263923|KDR', 'nc|ENSG00000128052|P35968-2|KDR', 'nc|ENSG00000128052|P35968-3|KDR'] 24934 6573 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 30.18 2 -0.8469711739746316 0.25689851767388827 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 7407 6235 ASAMVVWR True PC9_epitope_Rep2 918.4745573698199 918.47346993586 29.38 2 -0.8470033061804653 0.25689851767388827 1.0 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|76|1|anti-sense'] 25040 245 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 1.3633 2 -0.8470427541926359 0.2569339528519711 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 68935 24886 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 104.24 3 -0.8470595815500157 0.2569339528519711 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 11205 4822 DELIREVYEYW True NCI_RA007_Epitope_Rep2 1513.70890987725 1513.70725490379 23.381 3 -0.8471111537355382 0.25695879594658155 1.0 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32581422-32635732:-|nuORF'] 104526 4716 SSRQYLRYRY True H1975_Epitope_Rep3 1390.7105816430999 1390.7089349037901 23.265 3 -0.8471760435226614 0.2569938291838276 1.0 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000492117.1_1_Y:21868632-21877911:-|nuORF', 'ENST00000497100.5_1_X:53227940-53240837:-|nuORF', 'ENST00000469599.6_1_Y:21877495-21878275:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 61069 4757 LLAVSHVG True NCI_RA007_Epitope_Rep5 794.46503823194 794.46394993586 24.981 2 -0.8472004003715996 0.2569938291838276 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 16355 17399 EEKSLLNLS True PC9_epitope_Rep3 1031.54989005471 1031.54937496793 72.094 1 -0.8472632946798505 0.2569938291838276 1.0 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C'] 83654 9092 QEAERILLRTQ True H1975_Epitope_Rep2 1355.7521121019097 1355.75047490379 39.923 3 -0.8472636606021414 0.2569938291838276 1.0 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1'] 116118 6642 TVSQPGLAA True NCI_RA007_Epitope_Rep3 842.4497820906198 842.44868993586 33.194 2 -0.8472872903442529 0.2569938291838276 1.0 ['nc|ENSG00000073060|Q8WTV0-5|SCARB1', 'ENST00000415380.6_1_12:125263015-125270898:-|nuORF'] 72607 13222 MVSQSFTQLF True PC9_epitope_Rep5 1186.5692456003 1186.56760490379 55.866 3 -0.8472910250726785 0.2569938291838276 1.0 ['HRH3|p.R347L|1|0.34|ENSG00000101180|chr20:62216304-62216304|C/A|missense_variant'] 52234 11863 KNGYTAFDLV True NCI_RA007_Epitope_Rep1 1126.56587447202 1126.56476993586 50.125 2 -0.8473378131116663 0.257017468866661 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 20071 10110 ENFLHNAI True PC9_epitope_Rep4 956.4715801643599 956.47048993586 46.559 2 -0.84735765272028 0.257017468866661 1.0 ['ENSG00000027644|ENST00000368195|INSRR'] 122794 5179 VGVLHDPET True NCI_RA007_Epitope_Rep3 965.4818104948899 965.48070993586 27.363 2 -0.8473981233677248 0.257017468866661 1.0 ['ENST00000546226.5_1_11:118963098-118963308:+|nuORF', 'ENST00000543543.5_1_11:118963098-118963990:+|nuORF', 'ENST00000542044.5_1_11:118959775-118963990:+|nuORF', 'nc|ENSG00000256269|P08397-2|HMBS', 'ENSG00000256269|ENST00000652429|HMBS'] 123904 23929 VKHLKKKLK True NCI_RA007_Epitope_Rep3 1120.7808334793997 1120.7797299358601 103.67 2 -0.847430189792233 0.257017468866661 1.0 ['ENSG00000278289|ENST00000620654|CT45A6', 'ENSG00000278085|ENST00000611660|CT45A8', 'ENSG00000273696|ENST00000610598|CT45A7', 'ENSG00000271449|ENST00000612907|CT45A2', 'ENSG00000270946|ENST00000620704|CT45A9', 'ENSG00000269586|ENST00000682849|CT45A10', 'ENSG00000269096|ENST00000598716|CT45A3', 'ENSG00000268940|ENST00000594565|CT45A1', 'ENSG00000228836|ENST00000698999|CT45A5', 'chrX:135885350-135888848|170|110.96|0.05|11.14|-|ENST00000611668|CT45A10,CT45A10', 'chrX:135881315-135882536|241|118.07|1.0|6.88|-|ENST00000617981|CT45A10,CT45A10', 'chrX:135781735-135785220|228|373.1|0.31|10.21|-|ENST00000487941|CT45A5,CT45A5', 'chrX:135779641-135781561|228|103.74|0.53|7.61|-|ENST00000617203|CT45A5,CT45A5'] 17910 16401 EIDREFHNKLK True NCI_RA007_Epitope_Rep2 1427.7521121019097 1427.75100993586 68.524 2 -0.847445140201435 0.257017468866661 1.0 ['LSM14A-GPI|1|fusion', 'nc|ENSG00000257103|Q8ND56-3|LSM14A', 'nc|ENSG00000257103|Q8ND56|LSM14A', 'ENSG00000257103|ENST00000544216|LSM14A', 'ENST00000403062.2_1_6:122004885-122004996:+|nuORF'] 57178 11302 LEESASFESLS True H1975_Epitope_Rep1 1197.54011321665 1197.5390099358601 48.45 2 -0.8474469596967843 0.257017468866661 1.0 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC'] 127754 25894 VRKERKRHKT True PC9_epitope_Rep4 1336.81638412432 1336.8152899358602 109.31 2 -0.8474613868842203 0.257017468866661 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 117989 9655 VASGPISPT True PC9_epitope_Rep4 827.43888305375 827.43778993586 44.763 2 -0.8474873778800689 0.257017468866661 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.N341Ifs*23|1|0.12|ENSG00000130589|chr20:63569211-63569214|TAGT/-|frameshift_variant'] 30297 11832 GAASAPQPPAP True PC9_epitope_Rep4 962.4821448480599 962.48104993586 53.283 2 -0.8474933477951605 0.257017468866661 1.0 ['nc|ENSG00000145808|Q8TE59|ADAMTS19', 'ENSG00000145808|ENST00000274487|ADAMTS19'] 57065 11189 LEEIYELHAMP True NCI_RA007_Epitope_Rep2 1343.64313881655 1343.64204993586 48.105 2 -0.8475018542275339 0.257017468866661 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1'] 60984 10225 LLAHVARTR True NCI_RA007_Epitope_Rep1 1035.63014649443 1035.6290499358602 43.785 2 -0.8475109812260866 0.257017468866661 1.0 ['nc|ENSG00000168237|Q8IVS8-6|GLYCTK', 'ENST00000489173.1_1_3:52325707-52327139:+|nuORF', 'nc|ENSG00000168237|Q8IVS8-3|GLYCTK', 'ENSG00000168237|ENST00000436784|GLYCTK'] 85445 12336 QLFRIRWMHFL True NCI_RA007_Epitope_Rep1 1545.83909371485 1545.8379899358602 51.957 2 -0.847527945942703 0.257017468866661 1.0 ['ENST00000393346.7_1_11:85723404-85725959:-|nuORF'] 22479 7374 ETHKWAWFRRY True NCI_RA007_Epitope_Rep1 1578.7844152896998 1578.78277490379 32.678 3 -0.8475306043697087 0.257017468866661 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000570209.1_1_15:31127242-31129800:+|nuORF'] 11216 5648 DELYDWEYEGF True NCI_RA007_Epitope_Rep2 1464.5721416209196 1464.5710499358602 26.584 2 -0.8476384753595576 0.25707080062123305 1.0 ['ENSG00000178031|ENST00000380548|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-4|ADAMTSL1', 'ENST00000380559.7_1_9:18706652-18908543:+|nuORF'] 139647 6633 YTSETYLMKHM True NCI_RA007_Epitope_Rep1 1402.6261088534202 1402.6250099358601 29.814 2 -0.8476456875107984 0.2570956343326114 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 90823 17544 RKTHILIL True NCI_RA007_Epitope_Rep4 992.6494849566798 992.64838993586 75.933 2 -0.8476682696596393 0.25714529963240534 1.0 ['ENSG00000175264|ENST00000308064|CHST1'] 46978 10121 IVPAQEVP True PC9_epitope_Rep2 851.47526856247 851.47416993586 44.269 2 -0.8476884087236133 0.25714529963240534 1.0 ['ENSG00000131473|ENST00000352035|ACLY', 'nc|ENSG00000131473|P53396-2|ACLY', 'nc|ENSG00000131473|P53396-3|ACLY'] 84257 7391 QEVTQLSQEAQ True H1975_Epitope_Rep1 1259.5993594282702 1259.5982699358601 33.433 2 -0.8476921377238307 0.25715588356818214 1.0 ['ENSG00000084754|ENST00000380649|HADHA'] 86345 10920 QQKQALAL True NCI_RA007_Epitope_Rep4 898.5236157372198 898.52250993586 48.865 2 -0.8477513228704623 0.2571949621017838 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 57703 7124 LENEKVKKQLA True NCI_RA007_Epitope_Rep3 1298.7558005000199 1298.75470993586 35.143 2 -0.8477857845764487 0.25719821629553646 1.0 ['nc|ENSG00000106052|Q86VP1-2|TAX1BP1', 'ENSG00000106052|ENST00000396319|TAX1BP1', 'nc|ENSG00000106052|Q86VP1-3|TAX1BP1', 'nc|ENSG00000106052|Q86VP1-4|TAX1BP1'] 119963 5525 VEYRLVQS True NCI_RA007_Epitope_Rep4 992.5290950404799 992.52798993586 27.848 2 -0.847796749800519 0.25719821629553646 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant', 'PLXNA3|p.S956Lfs*51|1|0.53|ENSG00000130827|chrX:154466439-154466440|-/T|frameshift_variant'] 111278 13027 TLGWEPGHL True PC9_epitope_Rep6 1008.5028802926399 1008.50178993586 61.692 2 -0.8478183431863627 0.25719821629553646 1.0 ['DOP1A|p.S1083Vfs*21|1|0.18|ENSG00000083097|chr6:83137286-83137288|CTA/TT|frameshift_variant', 'ENSG00000083097|ENST00000349129|DOP1A'] 42733 11243 IFDLQNKV True PC9_epitope_Rep2 975.53893144819 975.53782993586 48.572 2 -0.8478210576149745 0.2572051344151126 1.0 ['ENSG00000122728|ENST00000242310|TAF1L', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 89185 3396 REIEDPEDRKP True H1975_Epitope_Rep3 1382.6790067312995 1382.67736490379 17.894 3 -0.8478226086637028 0.2572051344151126 1.0 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX', 'nc|ENSG00000127022|P27824-3|CANX'] 37761 8285 HAVHEEDRGK True NCI_RA007_Epitope_Rep2 1176.5635830562398 1176.5624899358602 36.865 2 -0.8478496463826555 0.2572262981693853 1.0 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'MYLK|p.K903Rfs*3|1|0.3|ENSG00000065534|chr3:123700762-123700762|C/-|frameshift_variant', 'ENST00000506361.5_1_3:123456168-123512688:-|nuORF'] 23098 7303 EVLQENYTHLP True NCI_RA007_Epitope_Rep1 1341.6564803815697 1341.65538993586 32.398 2 -0.847851510463357 0.2572262981693853 1.0 ['IPO7-WEE1|1|fusion', 'nc|ENSG00000166483|P30291-2|WEE1', 'ENSG00000166483|ENST00000450114|WEE1'] 45033 16879 IQMWLTGL True PC9_epitope_Rep6 960.5102741722 960.50916993586 77.443 2 -0.8478607229040396 0.25722955069945014 1.0 ['ENST00000561123.2_1_15:77864640-77900952:+|nuORF'] 112607 11245 TPAVSAGY True H1975_Epitope_Rep1 764.37046914076 764.36992496793 48.23 1 -0.8478968343369612 0.25722955069945014 1.0 ['ENSG00000171051|ENST00000304748|FPR1'] 757 5836 AAVSAVVGPAA True PC9_epitope_Rep5 911.5076313199098 911.50652993586 27.44 2 -0.8479325216156675 0.25722955069945014 1.0 ['ENSG00000170684|ENST00000303809|ZNF296'] 22641 18137 ETRKIKHLR True NCI_RA007_Epitope_Rep3 1179.7200241279897 1179.71947496793 79.463 1 -0.8480119418243963 0.2572401316258066 1.0 ['nc|ENSG00000100678|P57103-3|SLC8A3', 'SLC8A3|p.E535Nfs*35|2|0.17|ENSG00000100678|chr14:70166820-70166820|C/-|frameshift_variant', 'nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1', 'nc|ENSG00000183023|P32418-2|SLC8A1', 'nc|ENSG00000183023|P32418-3|SLC8A1', 'nc|ENSG00000183023|P32418-4|SLC8A1'] 22454 4762 ETGSFLWATY True H1975_Epitope_Rep2 1173.5342399905699 1173.5331499358601 23.406 2 -0.8480370003523097 0.25726495726495724 1.0 ['ENST00000564294.5_1_16:2256050-2256778:+|nuORF'] 129758 5158 VTKKVKIRK True PC9_epitope_Rep5 1098.76009803482 1098.7590099358601 24.86 2 -0.8481012645998598 0.25727553738550735 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 55631 12503 LDACRCMINL True PC9_epitope_Rep5 1150.52970637078 1150.52860993586 53.091 2 -0.8482145720360307 0.25731460642146947 1.0 ['ENSG00000137225|ENST00000398776|CAPN11', 'CAPN11|p.W639*|1|0.36|ENSG00000137225|chr6:44181298-44181298|G/-|frameshift_variant', 'CAPN11|p.M622K|1|0.29|ENSG00000137225|chr6:44180993-44180993|T/A|missense_variant'] 126477 9014 VPLYSTIEVY True PC9_epitope_Rep1 1182.61724133854 1182.61558490379 39.52 3 -0.8482744641975476 0.257367918749911 1.0 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'nc|ENSG00000165323|Q8TDW7-2|FAT3'] 100423 3885 SLPAWVFSQQR True NCI_RA007_Epitope_Rep2 1317.68296991293 1317.68131490379 19.748 3 -0.8483162661276435 0.2573927411543502 1.0 ['ENST00000488141.5_1_22:37887199-37892645:-|nuORF'] 11446 16163 DFSSYSHVEP True H1975_Epitope_Rep2 1166.48801807414 1166.4869299358602 67.383 2 -0.8483175913177082 0.2574033188519336 1.0 ['ENSG00000113722|ENST00000231656|CDX1'] 122881 16933 VGVPTRAR True NCI_RA007_Epitope_Rep2 854.5086343794198 854.50808496793 70.603 1 -0.8483283635560039 0.2574281400450104 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 31824 11771 GENCERVP True PC9_epitope_Rep1 902.3916155914999 902.39050993586 50.15 2 -0.8484095348859862 0.2574814477188884 1.0 ['nc|ENSG00000132842|O00203-3|AP3B1', 'ENSG00000132842|ENST00000255194|AP3B1'] 332 4570 AAILWEQNQR True NCI_RA007_Epitope_Rep4 1227.63601972051 1227.6343649037901 23.982 3 -0.8485408067615133 0.2575595721346266 1.0 ['ENST00000540651.5_1_1:228270396-228270462:+|nuORF'] 37416 7046 GWCQENGR True NCI_RA007_Epitope_Rep4 948.3871989173998 948.38610993586 33.729 2 -0.8485600636156817 0.2575595721346266 1.0 ['nc|ENSG00000154655|Q8NA19-2|L3MBTL4', 'ENSG00000154655|ENST00000317931|L3MBTL4', 'nc|ENSG00000154655|Q8NA19|L3MBTL4'] 54977 4139 LAIEAGFH True PC9_epitope_Rep4 856.4443027873599 856.44320993586 22.247 2 -0.8486764506870973 0.2576128756587381 1.0 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENST00000460124.5_1_10:5042672-5046051:-|nuORF', 'nc|ENSG00000151632|P52895-2|AKR1C2'] 18858 8377 ELEIQALRWAI True PC9_epitope_Rep2 1340.7452358163198 1340.7436049037901 37.595 3 -0.848754395546101 0.2576376920995286 1.0 ['ENST00000492515.1_1_11:558546-558956:-|nuORF', 'ENSG00000185522|ENST00000329451|LMNTD2'] 28539 12089 FSIIPEAP True PC9_epitope_Rep3 872.4643695256 872.46326993586 51.542 2 -0.8488340887278134 0.2576909929926508 1.0 ['ENSG00000050327|ENST00000056217|ARHGEF5', 'ENSG00000213214|ENST00000378115|ARHGEF35'] 64917 17214 LSCHCHSC True PC9_epitope_Rep1 888.3040635404002 888.30296993586 71.031 2 -0.8488682266334041 0.2577158076139746 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 98482 9015 SIKWAKSVP True NCI_RA007_Epitope_Rep4 1014.5862159937799 1014.58510993586 41.509 2 -0.8489457349838795 0.25775486370239553 1.0 ['ENSG00000112333|ENST00000368986|NR2E1', 'nc|ENSG00000112333|Q9Y466-2|NR2E1'] 71978 10619 MPYCQRKRK True PC9_epitope_Rep5 1208.6270523432797 1208.6254049037902 45.833 3 -0.8489737309424803 0.2577792335407796 1.0 ['ENST00000505573.2_1_5:19233806-19234037:+|nuORF'] 81265 6179 PPPPGEGF True NCI_RA007_Epitope_Rep5 796.3755545211999 796.37444993586 30.446 2 -0.8490186921835788 0.2577792335407796 1.0 ['ENST00000562735.5_1_16:2198645-2198768:+|nuORF'] 105861 23521 SVKKKKRRRKK True PC9_epitope_Rep1 1440.9841181557597 1440.98302993586 95.261 2 -0.8490321362604262 0.2577792335407796 1.0 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 66202 20027 LSPNEYFSLV True PC9_epitope_Rep5 1167.5811901829902 1167.58008993586 82.085 2 -0.8490712964373295 0.2577792335407796 1.0 ['nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7', 'ENSG00000254122|ENST00000398594|PCDHGB7'] 41792 20730 IDRRDLSMP True PC9_epitope_Rep1 1101.5600778989299 1101.5589899358602 84.565 2 -0.8490997064677428 0.2577792335407796 1.0 ['nc|ENSG00000185024|Q92994-8|BRF1'] 115965 8398 TVQAECPMHL True PC9_epitope_Rep4 1127.51035082519 1127.5087049037902 39.766 3 -0.849210012489485 0.25780404443178584 1.0 ['GABRA2|p.V239*|1|0.24|ENSG00000151834|chr4:46303601-46303601|C/-|frameshift_variant', 'ENSG00000151834|ENST00000381620|GABRA2', 'nc|ENSG00000151834|P47869-2|GABRA2'] 37007 14488 GVRTARWR True NCI_RA007_Epitope_Rep3 1000.56788059104 1000.56678993586 64.295 2 -0.8492278444922573 0.25781094243969127 1.0 ['ENST00000586590.5_2_19:11456273-11456894:-|nuORF', 'ENST00000394705.2_1_2:54081954-54087114:-|nuORF'] 18144 12872 EINKALTKDP True PC9_epitope_Rep1 1127.6186383208699 1127.61754993586 54.386 2 -0.8492379930319269 0.25781094243969127 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000494204.1_1_X:24833141-24859977:+|nuORF'] 56106 20533 LDLPLSLLH True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 84.412 2 -0.8492609007024137 0.25781784005468217 1.0 ['ENST00000488375.2_2_17:16220949-16229209:+|nuORF', 'ENSG00000108474|ENST00000225609|PIGL'] 6438 7203 APSNGLGQEE True PC9_epitope_Rep2 1000.4461532621599 1000.44504993586 33.096 2 -0.8492668768404931 0.25781784005468217 1.0 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1'] 116606 14894 TYGKEDVPLS True PC9_epitope_Rep5 1107.5448046742697 1107.54370993586 62.293 2 -0.8493190771914273 0.25782106597177723 1.0 ['nc|ENSG00000143379|Q15047-3|SETDB1', 'nc|ENSG00000143379|Q15047|SETDB1', 'ENSG00000143379|ENST00000692827|SETDB1'] 128694 10206 VSNLPKLP True PC9_epitope_Rep1 866.52255310806 866.52144993586 44.136 2 -0.849347494243486 0.25782106597177723 1.0 ['nc|ENSG00000136938|Q92688-2|ANP32B', 'ENSG00000136938|ENST00000339399|ANP32B', 'ENST00000473205.1_1_9:100746884-100764563:+|nuORF', 'ENST00000564205.1_1_15:75614457-75614928:-|nuORF'] 65239 14419 LSEELQGLDQL True PC9_epitope_Rep6 1243.62959692739 1243.6284899358602 67.359 2 -0.8493603234317905 0.25782106597177723 1.0 ['ENSG00000158773|ENST00000368021|USF1', 'nc|ENSG00000158773|P22415-2|USF1', 'ENST00000472217.1_1_1:161009712-161010126:-|nuORF'] 56123 9096 LDLVHTQLAP True PC9_epitope_Rep5 1105.61315901761 1105.61206993586 39.934 2 -0.8493971124049234 0.25784587344079285 1.0 ['nc|ENSG00000160767|P81408-3|ENTREP3', 'nc|ENSG00000160767|P81408-4|ENTREP3'] 65503 7874 LSFRWRENRCY True H1975_Epitope_Rep3 1528.7357508451198 1528.73464993586 35.263 2 -0.8494004110020313 0.2578564410713523 1.0 ['ENST00000563604.1_1_15:43017281-43017455:-|nuORF'] 11210 5262 DELNKRLHTKG True NCI_RA007_Epitope_Rep1 1309.7102472899298 1309.70860490379 24.551 3 -0.8494524809871051 0.2578812473302008 1.0 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2', 'ENST00000523861.1_1_8:120584407-120592491:-|nuORF'] 21870 4967 ESEFIDSQRV True H1975_Epitope_Rep3 1208.567331024 1208.56622993586 24.234 2 -0.8495052041434642 0.2578913647042073 1.0 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000572445.1_1_17:1564459-1565038:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 121033 5339 VGFFREAIRN True NCI_RA007_Epitope_Rep4 1207.6461904813898 1207.6450899358601 27.1 2 -0.8495833509856272 0.2578913647042073 1.0 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1'] 25414 17408 FEKLDDYAS True H1975_Epitope_Rep1 1086.4869554449797 1086.4858499358602 72.436 2 -0.8495975029301596 0.2578913647042073 1.0 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2', 'nc|ENSG00000109854|Q9BUP3-2|HTATIP2'] 133928 21900 WNRRVQQRRHL True NCI_RA007_Epitope_Rep5 1547.8657939282298 1547.86414490379 91.367 3 -0.8496183599724036 0.2578913647042073 1.0 ['ENST00000589838.5_1_19:11548888-11548933:+|nuORF'] 25001 3639 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 19.98 2 -0.8496261806977415 0.2578913647042073 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18073 12714 EIKEEIAS True H1975_Epitope_Rep2 917.4705771048499 917.46948993586 54.005 2 -0.8497432789479774 0.2579083739073489 1.0 ['ENSG00000104324|ENST00000220763|CPQ', 'CPQ|p.F33Y|1|0.13|ENSG00000104324|chr8:96784995-96784995|T/A|missense_variant'] 117879 10909 VAPQEKSLP True PC9_epitope_Rep3 967.5338460677499 967.53274993586 46.942 2 -0.8497496327451941 0.2579083739073489 1.0 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97'] 39314 22144 HLRQHQLLLL True PC9_epitope_Rep6 1269.7669743204099 1269.76586993586 98.119 2 -0.8497704470733366 0.2579083739073489 1.0 ['ENST00000377411.4_1_1:9171491-9189192:-|nuORF'] 100915 8167 SLSLSDLLY True NCI_RA007_Epitope_Rep3 1009.53317736141 1009.53208993586 39.244 2 -0.8497820692628678 0.2579083739073489 1.0 ['ENSG00000140030|ENST00000267549|GPR65'] 9140 7503 AVLWTAAK True PC9_epitope_Rep3 858.4963383602199 858.49524993586 33.863 2 -0.8497875675011723 0.2579083739073489 1.0 ['ENSG00000171798|ENST00000304613|KNDC1', 'nc|ENSG00000171798|Q76NI1-4|KNDC1'] 29881 17814 FVYGEPREL True PC9_epitope_Rep2 1108.5553097883198 1108.5542099358602 73.814 2 -0.849794752312532 0.2579083739073489 1.0 ['ENSG00000046774|ENST00000247452|MAGEC2'] 12043 9405 DIDQQWGPL True H1975_Epitope_Rep3 1070.50327421546 1070.5021699358601 41.177 2 -0.8497997038027316 0.2579083739073489 1.0 ['nc|ENSG00000089091|Q9NVP4-5|DZANK1', 'nc|ENSG00000089091|Q9NVP4|DZANK1', 'ENSG00000089091|ENST00000699568|DZANK1', 'nc|ENSG00000089091|Q9NVP4-2|DZANK1', 'nc|ENSG00000089091|Q9NVP4-4|DZANK1'] 130626 21896 VVAGRRKS True PC9_epitope_Rep3 871.53518348043 871.53408993586 89.527 2 -0.8498140027669282 0.2579189385419188 1.0 ['ENSG00000151952|ENST00000422113|TMEM132D', 'TMEM132D|p.Q218H|1|0.14|ENSG00000151952|chr12:129700124-129700124|C/G|missense_variant'] 6242 24794 APRKCFRVMK True NCI_RA007_Epitope_Rep5 1234.6790879161397 1234.67798993586 102.86 2 -0.8499078825402854 0.257957975058368 1.0 ['ENST00000545135.5_1_12:124429208-124429382:-|nuORF'] 59207 10870 LGGALGTPGPG True PC9_epitope_Rep1 895.4763311916299 895.4752299358599 46.697 2 -0.8499296606385555 0.2579685386860275 1.0 ['ENST00000359236.9_1_12:118541400-118541646:-|nuORF'] 99322 15688 SLDNPHHHFHS True PC9_epitope_Rep1 1326.5853811299803 1326.58372490379 65.166 3 -0.8499696391234738 0.257979102012926 1.0 ['nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1'] 58537 10137 LFCYLWSVP True PC9_epitope_Rep4 1126.55213898418 1126.55050490379 46.669 3 -0.8500141174043098 0.2579859924837718 1.0 ['ENSG00000257138|ENST00000547270|TAS2R38'] 120981 18728 VGESKFFLCQV True PC9_epitope_Rep1 1255.6270948295899 1255.6254449037901 76.826 3 -0.8500184200244401 0.2579859924837718 1.0 ['nc|ENSG00000149294|P13591-3|NCAM1', 'nc|ENSG00000149294|P13591-5|NCAM1', 'nc|ENSG00000149294|P13591-4|NCAM1', 'nc|ENSG00000149294|P13591-1|NCAM1', 'ENSG00000149294|ENST00000316851|NCAM1', 'NCAM1|p.V206Sfs*3|1|0.21|ENSG00000149294|chr11:113206167-113206167|G/-|frameshift_variant', 'nc|ENSG00000149294|P13591-6|NCAM1'] 60097 9725 LHTERLLK True NCI_RA007_Epitope_Rep2 1008.6080140675199 1008.60690993586 42.448 2 -0.8501098207598643 0.2580107901891842 1.0 ['ENST00000420353.6_1_12:53907497-53907599:-|nuORF'] 16214 7080 EEFQEHKT True H1975_Epitope_Rep2 1046.4668887067398 1046.4657899358601 32.164 2 -0.8501219474460976 0.25802135231316725 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant', 'REV3L|p.M1011Nfs*5|1|0.26|ENSG00000009413|chr6:111375323-111375324|-/T|frameshift_variant'] 80840 17003 PLTTTPRRRP True H1975_Epitope_Rep2 1193.69928868341 1193.69818993586 70.655 2 -0.8501417173605347 0.2580319141364536 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 17390 18208 EHFKKHGAE True NCI_RA007_Epitope_Rep4 1081.5304920228098 1081.52938993586 78.789 2 -0.8503245603544425 0.25806727114856304 1.0 ['ENSG00000117360|ENST00000324862|PRPF3', 'RPRD2-PRPF3|1|fusion', 'ENST00000467329.5_1_1:150316853-150325452:+|nuORF'] 22654 8909 ETRYRQRYLDL True NCI_RA007_Epitope_Rep1 1511.7844748593498 1511.78281490379 38.655 3 -0.8503870844686929 0.25806727114856304 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF'] 78474 10343 PDDHLAEALL True PC9_epitope_Rep4 1092.54513902744 1092.5440499358601 47.478 2 -0.8504601838803184 0.2580920659321889 1.0 ['ENSG00000109089|ENST00000337231|CDR2L'] 103754 25101 SRFIRLIPLG True PC9_epitope_Rep3 1170.7237125261 1170.7220549037902 101.9 3 -0.8505100208287099 0.25809895240264175 1.0 ['ENSG00000102104|ENST00000379984|RS1'] 91729 6948 RPKCVCIA True H1975_Epitope_Rep1 888.4673638143998 888.4662699358599 31.765 2 -0.8505102269064231 0.25809895240264175 1.0 ['ENST00000535164.5_1_16:19612936-19627472:+|nuORF'] 26296 13106 FIDLDRLLQH True H1975_Epitope_Rep1 1268.6877209402 1268.68662993586 55.502 2 -0.8505489819669432 0.2581058384810271 1.0 ['PTPRO|p.A1148D|1|0.37|ENSG00000151490|chr12:15589487-15589487|C/A|missense_variant'] 122135 16592 VGRHQRGR True NCI_RA007_Epitope_Rep3 964.5427284723598 964.54217496793 73.049 1 -0.8505749759885667 0.2581058384810271 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 118572 5228 VEAARRYVQFM True H1975_Epitope_Rep3 1368.6972400780799 1368.6961499358601 25.195 2 -0.850590828858941 0.2581269570167948 1.0 ['ENSG00000115850|ENST00000264162|LCT'] 12471 7514 DKSPEYSTL True H1975_Epitope_Rep1 1038.48695544498 1038.4858499358602 33.902 2 -0.8506171436555119 0.2581269570167948 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|229|1|anti-sense'] 7575 8158 ASGLAATVTI True PC9_epitope_Rep2 902.50729696674 902.50618993586 36.737 2 -0.8507086707390524 0.2581444003244951 1.0 ['ENSG00000116761|ENST00000370938|CTH', 'nc|ENSG00000116761|P32929-2|CTH'] 31518 8319 GEFEEGASENN True H1975_Epitope_Rep1 1181.4472754609696 1181.44616993586 36.93 2 -0.8507115581080871 0.2581444003244951 1.0 ['ENSG00000102241|ENST00000218364|HTATSF1', 'HTATSF1|p.N703Rfs*5|1|0.52|ENSG00000102241|chrX:136511853-136511854|AT/-|frameshift_variant'] 64058 4338 LQDPVPKE True NCI_RA007_Epitope_Rep5 924.4916469026 924.49054993586 23.292 2 -0.8507139167956412 0.2581444003244951 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 41398 13125 IAQYRDTI True PC9_epitope_Rep5 978.5134449763399 978.51234993586 55.49 2 -0.850741372279712 0.25815723941657776 1.0 ['ENST00000489991.1_1_3:132349350-132378619:-|nuORF'] 99257 12474 SLDAYAHAL True H1975_Epitope_Rep3 959.47124581119 959.47014993586 53.175 2 -0.8507618364146323 0.25815723941657776 1.0 ['nc|ENSG00000169169|Q8TCG5-2|CPT1C', 'ENSG00000169169|ENST00000598293|CPT1C', 'ENST00000295404.9_1_19:50200719-50213852:+|nuORF', 'ENST00000599023.5_1_19:50195509-50213852:+|nuORF', 'nc|ENSG00000169169|Q8TCG5-3|CPT1C'] 41061 15771 HYKPTPLYF True PC9_epitope_Rep1 1164.59678067748 1164.59568993586 65.486 2 -0.8507785042645524 0.25815723941657776 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 110923 17950 TLARSPSIYSI True PC9_epitope_Rep2 1206.66083748602 1206.6597499358602 74.35 2 -0.8508758792846154 0.25815723941657776 1.0 ['CTNND2|p.D536Y|1|0.16|ENSG00000169862|chr5:11346394-11346394|C/A|missense_variant'] 117905 16094 VAQLDQLLH True PC9_epitope_Rep4 1035.57129420563 1035.57018993586 69.842 2 -0.8509372963523274 0.25815723941657776 1.0 ['ENSG00000089199|ENST00000378961|CHGB'] 58458 2681 LEWTSRWNDLR True PC9_epitope_Rep3 1474.7317110104998 1474.73005490379 14.788 3 -0.8510019546455875 0.25815723941657776 1.0 ['ENST00000481501.1_1_17:27042472-27042902:-|nuORF'] 108759 5652 TENYKRNTENE True NCI_RA007_Epitope_Rep1 1396.6218857779998 1396.62078993586 26.045 2 -0.8510304087689697 0.25815723941657776 1.0 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant', 'BRCA2|p.L1390Ffs*13|1|0.17|ENSG00000139618|chr13:32338518-32338519|-/T|frameshift_variant'] 28285 4682 FRWIDWERLER True NCI_RA007_Epitope_Rep2 1604.8211947212396 1604.81953490379 22.838 3 -0.8510318781917314 0.25815723941657776 1.0 ['ENSG00000126583|ENST00000263431|PRKCG', 'nc|ENSG00000126583|P05129-2|PRKCG'] 73202 4918 NEFFKQVFK True H1975_Epitope_Rep3 1185.61824439805 1185.6171499358602 24.045 2 -0.8511015165835354 0.25815723941657776 1.0 ['ENST00000379565.7_1_X:20168583-20168808:-|nuORF'] 82458 16180 PVDNLVIK True PC9_epitope_Rep3 896.53311779176 896.53202993586 67.374 2 -0.8511267196192726 0.25815723941657776 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11', 'SPG11|p.E1697D|1|0.04|ENSG00000104133|chr15:44585666-44585666|C/G|missense_variant'] 82614 11991 PVKRTEAP True PC9_epitope_Rep1 896.5079656730799 896.50686993586 50.986 2 -0.8511469281883457 0.25815723941657776 1.0 ['ENSG00000114166|ENST00000263754|KAT2B', 'ENST00000468400.1_1_3:20189792-20189999:+|nuORF'] 23229 4309 EVQSIRWIFEN True NCI_RA007_Epitope_Rep2 1419.7146639640298 1419.71302490379 21.4 3 -0.8511832612115031 0.25815723941657776 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 114686 4670 TSSGRTSIPGP True NCI_RA007_Epitope_Rep4 1058.5356369729 1058.53452993586 24.385 2 -0.8513514539504525 0.2581810938478174 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant'] 104536 3003 SSSDSSSDSD True PC9_epitope_Rep5 972.31559258508 972.31504496793 16.462 1 -0.8513755299727827 0.2581810938478174 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4', 'ENSG00000130382|ENST00000252674|MLLT1'] 59460 11834 LGNIYHTGF True PC9_epitope_Rep4 1020.5028802926399 1020.50178993586 53.291 2 -0.8513761370219112 0.2581810938478174 1.0 ['ENST00000518622.5_1_19:48714695-48714965:-|nuORF'] 58724 16752 LFLDINRTL True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 72.404 2 -0.8513825371504848 0.2581810938478174 1.0 ['ENST00000534275.1_1_11:84473191-84511574:+|nuORF'] 55156 19555 LANKSITYQMF True PC9_epitope_Rep2 1314.6642086143 1314.66256490379 80.601 3 -0.8514248250206484 0.2581810938478174 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19'] 11440 22643 DFSAGLII True PC9_epitope_Rep2 834.44871946146 834.4481749679301 92.591 1 -0.8514430087605417 0.2581810938478174 1.0 ['ENSG00000178105|ENST00000322536|DDX10', 'ENST00000417796.1_1_9:84702837-84703236:-|nuORF'] 12489 11192 DKYQPLSL True PC9_epitope_Rep1 962.5072969667399 962.50618993586 47.932 2 -0.8514458480039017 0.2581810938478174 1.0 ['ENSG00000204311|ENST00000644580|PJVK', 'ENST00000437056.5_1_2:179318136-179318400:+|nuORF'] 32800 4307 GIELSWPRPD True H1975_Epitope_Rep3 1168.58767254576 1168.58656993586 21.681 2 -0.8514524927591285 0.2581810938478174 1.0 ['ENST00000372756.5_1_20:43922234-43922381:-|nuORF'] 115332 8781 TVEATRLVV True NCI_RA007_Epitope_Rep3 986.5760452328999 986.57494993586 41.628 2 -0.8514594462670687 0.2581810938478174 1.0 ['ENST00000458001.2_1_13:114537574-114541183:+|nuORF'] 5971 6101 APKQTPDSGKP True NCI_RA007_Epitope_Rep1 1124.5825871653199 1124.58094490379 27.769 3 -0.8514984886558318 0.25818383576844833 1.0 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'ENST00000464771.1_1_10:129899883-129901361:-|nuORF'] 18686 6732 ELDCHITKDEQ True H1975_Epitope_Rep1 1329.58708049241 1329.5859899358602 30.937 2 -0.851539428379705 0.25818383576844833 1.0 ['nc|ENSG00000153982|Q8N9F7-3|GDPD1', 'nc|ENSG00000153982|Q8N9F7-2|GDPD1', 'ENSG00000153982|ENST00000284116|GDPD1', 'ENST00000583543.1_1_17:57298054-57326181:+|nuORF'] 29076 9715 FTPTFSQH True H1975_Epitope_Rep1 963.4450310633499 963.44392993586 42.296 2 -0.8515913696227154 0.25818383576844833 1.0 ['ENST00000503574.1_1_4:109542025-109542112:+|nuORF'] 50497 3916 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 19.789 3 -0.851591827873727 0.25818383576844833 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 62749 8273 LLYWQFTIYTI True PC9_epitope_Rep4 1459.77513896227 1459.7734949037902 39.284 3 -0.8516176686635877 0.25818383576844833 1.0 ['nc|ENSG00000279078|Q9HBX3|SND1-IT1'] 74643 21808 NLERGYRMVRP True H1975_Epitope_Rep2 1389.72993718869 1389.7288299358602 90.192 2 -0.8516251932170504 0.25818383576844833 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'ENST00000469765.5_1_1:32745435-32751314:+|nuORF'] 82108 8058 PTAHCALT True PC9_epitope_Rep5 812.38507365908 812.38396993586 35.933 2 -0.8516469599337576 0.25818383576844833 1.0 ['ENST00000568641.1_1_17:5403919-5404423:-|nuORF'] 61803 19750 LLKQGLPPAQL True PC9_epitope_Rep4 1176.7230438197598 1176.72194993586 84.092 2 -0.8517591505222153 0.2582228418596711 1.0 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'ENST00000576723.5_1_17:7843028-7852016:+|nuORF'] 19818 12524 ELTRKIGFDP True PC9_epitope_Rep1 1174.6346227381798 1174.63352993586 53.044 2 -0.8517834907915859 0.2582333945058541 1.0 ['ENSG00000153790|ENST00000283905|C7orf31'] 139085 6206 YSMVYMCHIFF True NCI_RA007_Epitope_Rep3 1439.60762233831 1439.6065299358602 31.417 2 -0.8517963393463963 0.25824027313464687 1.0 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|1|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|4', 'chr8:91197524-91200613|289|13.1|0.22|5.87|+|2|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|3'] 69185 26442 LVMCIVLRP True PC9_epitope_Rep5 1042.6031290112198 1042.6020299358602 107.63 2 -0.851813007870697 0.25824027313464687 1.0 ['ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 3282 17036 AGGERWQRVLL True PC9_epitope_Rep5 1283.7098533671099 1283.7087499358602 70.546 2 -0.8518793640733946 0.2582613767301592 1.0 ['ENSG00000101400|ENST00000217381|SNTA1', 'SNTA1|p.G203Afs*15|1|0.32|ENSG00000101400|chr20:33417812-33417812|C/-|frameshift_variant', 'nc|ENSG00000101400|Q13424-2|SNTA1'] 72187 16374 MRRKRKQQKRL True PC9_epitope_Rep6 1526.9416017207798 1526.93995490379 75.369 3 -0.8518992198646178 0.2582613767301592 1.0 ['nc|ENSG00000184343|Q9UPE1-2|SRPK3', 'nc|ENSG00000184343|Q9UPE1-3|SRPK3', 'nc|ENSG00000184343|Q9UPE1-4|SRPK3', 'ENSG00000184343|ENST00000370101|SRPK3'] 94111 6483 RWERYRRECQE True NCI_RA007_Epitope_Rep2 1609.7531918144098 1609.7515349037901 29.827 3 -0.8519402083195202 0.2582682541714676 1.0 ['nc|ENSG00000010310|P48546-2|GIPR', 'nc|ENSG00000010310|P48546-3|GIPR', 'ENSG00000010310|ENST00000590918|GIPR'] 114653 8706 TSQAKPEAL True PC9_epitope_Rep5 943.4974605590298 943.49636993586 38.429 2 -0.8519532984453309 0.2582682541714676 1.0 ['ENSG00000206181|ENST00000332567|ELOA2'] 131693 25406 VWRIRQLLRR True PC9_epitope_Rep1 1394.8735050776197 1394.87240993586 102.69 2 -0.8520986072134972 0.25830358031891437 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33', 'nc|ENSG00000167612|Q7Z3H0-1|ANKRD33'] 65813 8713 LSKEIWLPP True H1975_Epitope_Rep3 1081.6171817688898 1081.6160899358601 38.516 2 -0.8521068135546777 0.25830358031891437 1.0 ['ENSG00000213965|ENST00000397061|NUDT19'] 19888 12934 ELWDRLQIP True PC9_epitope_Rep1 1168.6240580544797 1168.62296993586 54.623 2 -0.8522363170921493 0.2583531286004865 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 88692 12724 RCLLRCYVP True PC9_epitope_Rep1 1121.58379054897 1121.5826899358601 53.817 2 -0.8522532192732628 0.2583531286004865 1.0 ['ENST00000262395.9_1_17:27076744-27076957:+|nuORF'] 69577 18484 LVTTITFQVL True PC9_epitope_Rep1 1133.66961126457 1133.66797490379 75.889 3 -0.8522569986550458 0.25836367774237595 1.0 ['ENST00000303545.3_1_8:125487403-125498198:+|nuORF'] 92294 5903 RQLFKHWKFF True PC9_epitope_Rep6 1435.7877097649896 1435.78606490379 30.972 3 -0.8522731125051461 0.258374226584169 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 104170 16415 SSCDPLGVV True NCI_RA007_Epitope_Rep1 875.40586867331 875.40476993586 67.964 2 -0.8523813518784177 0.2583989986629875 1.0 ['ENST00000521209.6_1_8:10108126-10108276:+|nuORF'] 72873 14138 NARVMLETQE True PC9_epitope_Rep5 1189.57612188589 1189.57447490379 59.393 3 -0.8524052580375411 0.2584095467023198 1.0 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3'] 103880 4544 SRLGEHEF True PC9_epitope_Rep3 973.4617437566501 973.46064993586 22.571 2 -0.8524449155922528 0.2584306418808403 1.0 ['nc|ENSG00000075340|P35612-2|ADD2', 'nc|ENSG00000075340|P35612-8|ADD2', 'nc|ENSG00000075340|P35612-9|ADD2', 'nc|ENSG00000075340|P35612-4|ADD2', 'nc|ENSG00000075340|P35612-3|ADD2', 'ENSG00000075340|ENST00000264436|ADD2'] 88724 14136 RCWWRWPRCYW True H1975_Epitope_Rep1 1696.7656115047598 1696.7645099358601 59.546 2 -0.852452309361546 0.2584306418808403 1.0 ['ENST00000341500.9_1_19:7267817-7293934:-|nuORF'] 36709 23904 GVMVRKKSLF True PC9_epitope_Rep2 1163.68488448923 1163.68437496793 97.424 1 -0.8524902152695708 0.25844118902005403 1.0 ['ENST00000519072.5_1_8:42251729-42254267:+|nuORF'] 112671 10001 TPFRKDLI True NCI_RA007_Epitope_Rep3 988.5705659296398 988.56946993586 46.431 2 -0.8525067172771738 0.2584586065165759 1.0 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000272193.10_1_1:204085443-204095259:+|nuORF'] 98517 8500 SILGSSKILL True NCI_RA007_Epitope_Rep5 1029.6433965167298 1029.6422899358602 39.379 2 -0.8525175725740731 0.2584586065165759 1.0 ['ENST00000555658.5_1_14:89730286-89817056:-|nuORF'] 84758 13920 QHIHRVYRQ True NCI_RA007_Epitope_Rep4 1235.6635718810298 1235.6624699358601 60.818 2 -0.8525478485165907 0.2584586065165759 1.0 ['ENSG00000115112|ENST00000263707|TFCP2L1', 'ENST00000464621.1_1_2:121981919-121991838:-|nuORF'] 76827 14477 NVFLFVWYY True H1975_Epitope_Rep3 1249.6171817688898 1249.6160899358601 61.045 2 -0.8525710215153331 0.25846915265807663 1.0 ['ENSG00000165168|ENST00000378588|CYBB', 'CYBB|p.K331Rfs*12|1|0.56|ENSG00000165168|chrX:37803969-37803969|A/-|frameshift_variant', 'CYBB|p.W206Gfs*8|2|0.14|ENSG00000165168|chrX:37796079-37796079|C/-|frameshift_variant', 'CYBB|p.W289Gfs*24|2|0.12|ENSG00000165168|chrX:37801313-37801313|T/-|frameshift_variant'] 135072 7414 YALIGKNG True NCI_RA007_Epitope_Rep3 834.4599528515 834.45884993586 36.287 2 -0.8527000821360042 0.25849392021617007 1.0 ['ADAMTS18|p.S373Y|2|0.43|ENSG00000140873|chr16:77362203-77362203|G/T|missense_variant'] 118771 12967 VEDVRPHHTDA True NCI_RA007_Epitope_Rep1 1274.6003624877799 1274.59926993586 54.429 2 -0.8527408624221255 0.2585003057408171 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 55341 8275 LASERAITV True NCI_RA007_Epitope_Rep4 958.5447451046199 958.54364993586 38.639 2 -0.8528316764987437 0.2585003057408171 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000471603.6_1_16:2152958-2153681:-|nuORF', 'ENST00000532739.1_1_16:16465196-16470832:+|nuORF', 'ENST00000415938.7_1_16:2152605-2162466:-|nuORF', 'ENST00000480227.5_1_16:2149506-2153780:-|nuORF', 'ENST00000483731.5_1_16:2153201-2162466:-|nuORF'] 95607 7517 SATLMPVP True PC9_epitope_Rep3 814.4258758418999 814.42476993586 33.916 2 -0.8528349758370332 0.2585003057408171 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 125212 17830 VLQPHENIV True PC9_epitope_Rep1 1047.57129420563 1047.57018993586 73.376 2 -0.8528722029256515 0.2585003057408171 1.0 ['ENSG00000169554|ENST00000627532|ZEB2', 'nc|ENSG00000169554|O60315-2|ZEB2', 'ZEB2|p.S829Ifs*3|1|0.15|ENSG00000169554|chr2:144398701-144398701|C/-|frameshift_variant'] 134258 20453 WRRRRPGRR True NCI_RA007_Epitope_Rep2 1294.7707713445798 1294.76966993586 84.63 2 -0.8529032972463375 0.2585003057408171 1.0 ['ENSG00000110665|ENST00000381153|C11orf21'] 82084 8359 PSYLLTCR True PC9_epitope_Rep5 951.48478770035 951.48368993586 37.095 2 -0.8529034598841038 0.2585003057408171 1.0 ['ENST00000376681.7_1_17:46840236-46881289:-|nuORF'] 93666 7977 RTGWVYRNV True PC9_epitope_Rep4 1149.60432566941 1149.60268490379 38.129 3 -0.8529781826146121 0.2585108500895879 1.0 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'nc|ENSG00000111906|Q7Z4H3-3|HDDC2', 'ENST00000609574.1_1_6:125621682-125623108:-|nuORF'] 101130 5673 SLVIQKAAI True NCI_RA007_Epitope_Rep5 941.5909670210499 941.58986993586 28.51 2 -0.8529898895464093 0.2585213941384753 1.0 ['CON__ENSEMBL:ENSBTAP00000032840'] 12042 9269 DIDQQWGPL True H1975_Epitope_Rep2 1070.50327421546 1070.5021699358601 40.608 2 -0.853009239100698 0.2585388049938856 1.0 ['nc|ENSG00000089091|Q9NVP4-5|DZANK1', 'nc|ENSG00000089091|Q9NVP4|DZANK1', 'ENSG00000089091|ENST00000699568|DZANK1', 'nc|ENSG00000089091|Q9NVP4-2|DZANK1', 'nc|ENSG00000089091|Q9NVP4-4|DZANK1'] 31067 16144 GAVWFEAGVL True PC9_epitope_Rep3 1047.53893144819 1047.5378299358601 67.245 2 -0.853025992887023 0.2585388049938856 1.0 ['ENST00000371753.5_1_9:138901783-138902074:-|nuORF'] 134292 19480 WRSRRRRRP True H1975_Epitope_Rep2 1324.7813360282798 1324.78022993586 80.834 2 -0.8530284292691211 0.2585388049938856 1.0 ['ENST00000389561.6_1_12:132551999-132562003:+|nuORF'] 125926 3773 VNYQNKCRL True NCI_RA007_Epitope_Rep3 1136.5760623162398 1136.5744049037899 20.976 3 -0.853087921881193 0.2585635673354473 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 90371 22967 RIKEIQYEIFR True NCI_RA007_Epitope_Rep1 1493.8354478030499 1493.83381490379 94.325 3 -0.853171366475896 0.2585988710204894 1.0 ['ENSG00000218336|ENST00000511685|TENM3'] 140201 10094 YVYTCMYTH True PC9_epitope_Rep1 1179.47290268731 1179.4712549037902 43.698 3 -0.8531761006620635 0.2585988710204894 1.0 ['ENST00000407010.6_2_7:16128723-16129239:-|nuORF'] 29359 3021 FVEEWRKFVRK True NCI_RA007_Epitope_Rep2 1522.8408675366597 1522.83865987172 16.317 4 -0.8532055018557965 0.2586199542164906 1.0 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48'] 36015 16235 GVDFEGTF True PC9_epitope_Rep3 870.37594844402 870.37484993586 67.585 2 -0.8532065068511941 0.2586199542164906 1.0 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 136053 13857 YFTIKLYWWRF True H1975_Epitope_Rep1 1621.84455593477 1621.84344993586 58.449 2 -0.8532548887083825 0.25864103621344176 1.0 ['ENSG00000145428|ENST00000347063|RNF175'] 121533 16927 VGKLLDNL True PC9_epitope_Rep4 870.51746772762 870.51636993586 73.097 2 -0.8532576998202929 0.25864103621344176 1.0 ['ENSG00000213918|ENST00000246949|DNASE1'] 121494 23834 VGKFRMYVAV True PC9_epitope_Rep3 1168.6426853240798 1168.64217496793 96.963 1 -0.853273668354309 0.25864740755484156 1.0 ['ENSG00000124491|ENST00000264870|F13A1', 'F13A1|p.F354Sfs*8|1|0.39|ENSG00000124491|chr6:6222086-6222086|G/-|frameshift_variant'] 64443 12047 LQSHPTNDVY True H1975_Epitope_Rep2 1172.5462016566 1172.5451099358602 51.418 2 -0.8532781345845075 0.25864740755484156 1.0 ['ENST00000271375.6_1_1:168213112-168213319:+|nuORF'] 41207 8917 IADFVLVWEE True NCI_RA007_Epitope_Rep1 1219.6124903112698 1219.6113899358602 38.686 2 -0.853291546998425 0.25864740755484156 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7'] 109081 15642 TFETGVPF True NCI_RA007_Epitope_Rep1 896.4279840168798 896.42743496793 64.935 1 -0.8532923269361515 0.25864740755484156 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN'] 65733 9922 LSHWKRSLF True PC9_epitope_Rep6 1172.6454622054 1172.6438249037901 48.682 3 -0.8533069734927988 0.25864740755484156 1.0 ['ENST00000369847.3_2_10:105086334-105104817:-|nuORF'] 8539 7121 ATYGKLTLK True NCI_RA007_Epitope_Rep4 993.5858816406098 993.58478993586 34.011 2 -0.853311240723231 0.25864740755484156 1.0 ['CON__Q9U6Y5'] 16794 7971 EFIELDIDEPD True H1975_Epitope_Rep1 1333.5925427123298 1333.59144993586 35.61 2 -0.8533290220506565 0.25865794711401763 1.0 ['nc|ENSG00000112964|P10912-4|GHR', 'ENSG00000112964|ENST00000230882|GHR'] 73419 14095 NESGELVAI True PC9_epitope_Rep5 930.4658260775799 930.4652749679301 59.227 1 -0.8533429285365832 0.25867534793796115 1.0 ['nc|ENSG00000111837|P20794-3|MAK', 'nc|ENSG00000111837|P20794|MAK', 'ENSG00000111837|ENST00000354489|MAK'] 31023 10549 GAVGALPG True NCI_RA007_Epitope_Rep1 640.3544251538 640.3538749679301 45.017 1 -0.8533445566242229 0.25867534793796115 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'ENST00000544414.1_1_12:133209229-133212540:-|nuORF'] 120968 6191 VGERGTTL True PC9_epitope_Rep2 831.4450310633499 831.44392993586 29.205 2 -0.8533526920315848 0.25867534793796115 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'ENST00000482899.1_1_7:150737654-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 131549 22611 VVVLATAIA True PC9_epitope_Rep1 855.5429541994699 855.54184993586 91.784 2 -0.8533669829772491 0.2586785318283911 1.0 ['ENSG00000156875|ENST00000370152|MFSD14A'] 50491 2134 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 11.046 3 -0.8534216272793592 0.2586785318283911 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 123261 14097 VHPRVGRRRRS True H1975_Epitope_Rep1 1374.8181154598199 1374.8164649037901 59.393 3 -0.8534272111872109 0.2586785318283911 1.0 ['ENST00000597790.5_1_19:50879837-50880852:+|nuORF'] 139729 6243 YTWRWVWSWEW True PC9_epitope_Rep4 1683.7622828627896 1683.76063490379 31.059 3 -0.8534531204074581 0.25868539261954854 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 55283 4772 LARDRSSTDNR True NCI_RA007_Epitope_Rep1 1289.64362428209 1289.64196490379 22.642 3 -0.8534557225675261 0.25868539261954854 1.0 ['ENSG00000101639|ENST00000506447|CEP192', 'CEP192|p.S1464Ffs*9|1|0.11|ENSG00000101639|chr18:13059212-13059213|-/T|frameshift_variant', 'CEP192|p.Q1109Efs*2|1|0.12|ENSG00000101639|chr18:13055915-13055916|CA/-|frameshift_variant'] 30558 7068 GAKEKNHQLYK True H1975_Epitope_Rep1 1314.7044336335 1314.7033299358602 32.218 2 -0.8534665887871986 0.25869593029040927 1.0 ['HGSNAT-AGPAT6|1|fusion', 'ENSG00000158669|ENST00000396987|GPAT4'] 107679 8082 TAKPKAAKP True NCI_RA007_Epitope_Rep5 910.5600012459398 910.55890993586 37.775 2 -0.8535459243653818 0.25873489694385216 1.0 ['ENSG00000168298|ENST00000304218|H1-4'] 36503 9176 GVKGAKIK True PC9_epitope_Rep3 799.5279728416699 799.52686993586 40.235 2 -0.8536027896189596 0.258748614151292 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 8738 7149 AVDSADRSPR True NCI_RA007_Epitope_Rep1 1072.52613491836 1072.5250299358602 31.799 2 -0.8536063432008506 0.258748614151292 1.0 ['nc|ENSG00000159023|P11171-4|EPB41', 'nc|ENSG00000159023|P11171-6|EPB41', 'nc|ENSG00000159023|P11171-3|EPB41', 'nc|ENSG00000159023|P11171-5|EPB41', 'nc|ENSG00000159023|P11171-2|EPB41', 'ENSG00000159023|ENST00000343067|EPB41', 'nc|ENSG00000159023|P11171-7|EPB41'] 37786 9298 HCCRGTWWR True PC9_epitope_Rep1 1203.5178362474699 1203.5167299358602 40.619 2 -0.8536350625957995 0.258748614151292 1.0 ['ENST00000480550.1_1_20:19998040-20007434:+|nuORF'] 104514 24165 SSRCGCKN True H1975_Epitope_Rep2 853.35345626097 853.35290496793 99.484 1 -0.8536367645001908 0.258748614151292 1.0 ['ENSG00000145794|ENST00000503335|MEGF10', 'MEGF10|p.V463I|1|0.51|ENSG00000145794|chr5:127419201-127419201|G/A|missense_variant', 'nc|ENSG00000145794|Q96KG7-2|MEGF10'] 19294 10672 ELLRWKEDP True PC9_epitope_Rep5 1184.61897267404 1184.6178699358602 46.038 2 -0.8536775991558563 0.25875179441988716 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1', 'ENST00000606296.1_1_3:18393447-18393747:-|nuORF', 'ENST00000467628.1_1_3:18393447-18419817:-|nuORF'] 74471 16842 NKIQITEP True PC9_epitope_Rep5 941.51819600361 941.51708993586 69.792 2 -0.8536798098350451 0.25875179441988716 1.0 ['FCRL3|p.D70N|1|0.16|ENSG00000160856|chr1:157698474-157698474|C/T|missense_variant'] 91387 6647 RMWKRQQQKWE True H1975_Epitope_Rep1 1602.8201491754196 1602.8190499358602 30.622 2 -0.8537007774529252 0.25875179441988716 1.0 ['nc|ENSG00000150687|O95084-2|PRSS23', 'ENSG00000150687|ENST00000280258|PRSS23'] 6036 9618 APLSETGAP True PC9_epitope_Rep5 841.4181476091699 841.41704993586 41.96 2 -0.8537359040588556 0.25875815414351294 1.0 ['nc|ENSG00000156374|Q9BYE7-3|PCGF6', 'ENSG00000156374|ENST00000369847|PCGF6'] 25025 178 FDDGDCCD True PC9_epitope_Rep3 888.226583982 888.22548993586 1.0151 2 -0.8537633355505435 0.25875815414351294 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 81499 10028 PQQPLPPPQPG True PC9_epitope_Rep2 1154.6084079903399 1154.60730993586 43.898 2 -0.853790037102225 0.25875815414351294 1.0 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENSG00000240445|ENST00000395675|FOXO3B', 'ENST00000395675.4_1_17:18575624-18576137:-|nuORF'] 82736 13752 PVPTTVPV True PC9_epitope_Rep6 808.4694549060399 808.46834993586 64.693 2 -0.8538078323697846 0.25875815414351294 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2', 'nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 24960 2829 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 15.857 2 -0.8538177071835562 0.25875815414351294 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 46060 18082 ISWVNNLEV True PC9_epitope_Rep5 1072.55530978832 1072.5542099358602 74.565 2 -0.8538374439070071 0.25875815414351294 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENST00000438277.5_1_2:128855105-128928859:+|nuORF'] 78431 8230 PCCGCCCG True PC9_epitope_Rep5 744.15217989724 744.15162496793 36.596 1 -0.8538945480233595 0.25876501101399846 1.0 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 135805 7859 YENRPLLIK True NCI_RA007_Epitope_Rep5 1144.6604435631998 1144.65880490379 36.926 3 -0.8539740431238295 0.25876501101399846 1.0 ['ENSG00000100558|ENST00000216446|PLEK2'] 78738 5026 PEGGEAAFPPC True H1975_Epitope_Rep3 1073.4487961144498 1073.4476899358601 24.453 2 -0.8540211574437607 0.2587750461844536 1.0 ['ENST00000367607.7_2_1:179924016-179959652:+|nuORF'] 23089 6559 EVLKSRKYI True NCI_RA007_Epitope_Rep2 1134.67609362734 1134.6744449037901 30.125 3 -0.8540730859897706 0.2587750461844536 1.0 ['ENST00000256707.7_2_2:8870236-8870326:-|nuORF'] 50487 1513 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 7.8649 3 -0.8540873913064959 0.2587750461844536 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 60316 14901 LIFLFKWYMIS True H1975_Epitope_Rep1 1459.7937662318698 1459.7926699358602 62.553 2 -0.8540991551509314 0.2587750461844536 1.0 ['ENST00000463645.1_1_2:132491378-132509159:+|nuORF'] 130732 5345 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep2 1029.44371111445 1029.4426099358602 25.947 2 -0.854116373930183 0.2587750461844536 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 128996 7194 VSYFWGLYSVK True NCI_RA007_Epitope_Rep2 1347.68632395787 1347.6852299358602 32.603 2 -0.8541433078588369 0.2587782246031859 1.0 ['ENST00000590884.5_1_18:43447592-43462392:-|nuORF'] 38431 21899 HGSTLHRNIL True PC9_epitope_Rep6 1146.6257893899801 1146.62413490379 97.136 3 -0.8541481654493308 0.2587782246031859 1.0 ['ENSG00000137802|ENST00000457542|MAPKBP1', 'nc|ENSG00000137802|O60336|MAPKBP1', 'ENST00000505061.5_1_15:42105116-42107966:+|nuORF', 'nc|ENSG00000137802|O60336-2|MAPKBP1', 'nc|ENSG00000137802|O60336-3|MAPKBP1'] 57297 10101 LEGITAII True H1975_Epitope_Rep1 828.49566965388 828.49456993586 43.79 2 -0.8541782367540705 0.2587782246031859 1.0 ['DOP1A|p.S1083Vfs*21|1|0.18|ENSG00000083097|chr6:83137286-83137288|CTA/TT|frameshift_variant', 'ENSG00000083097|ENST00000349129|DOP1A'] 41996 9574 IEDLLEASMP True H1975_Epitope_Rep3 1116.53727676568 1116.53616993586 41.836 2 -0.8541930871906379 0.25878507992895206 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 68874 18854 LVEFYEEIK True H1975_Epitope_Rep3 1168.6015912743999 1168.6004899358602 79.08 2 -0.8541993720977239 0.25878507992895206 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000416281.6_1_11:67044605-67048428:+|nuORF'] 13569 8994 DPNSPINAK True H1975_Epitope_Rep1 954.47705946762 954.47596993586 39.501 2 -0.8542764131211428 0.2588240309196317 1.0 ['FRY|p.M2908Cfs*5|1|0.3|ENSG00000073910|chr13:32294509-32294509|A/-|frameshift_variant', 'ENSG00000073910|ENST00000542859|FRY'] 110824 24776 TKRQHKRKS True NCI_RA007_Epitope_Rep1 1167.6948720093098 1167.69322490379 102.57 3 -0.854300841253374 0.2588308846514536 1.0 ['ENST00000269214.9_1_18:19155190-19155674:-|nuORF'] 50485 1291 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 6.7481 3 -0.8543211234323348 0.2588308846514536 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 54850 8023 LAGDFSFGR True PC9_epitope_Rep2 968.4715801643599 968.47048993586 36.221 2 -0.854359381956408 0.25884141576322484 1.0 ['ENSG00000186766|ENST00000388920|FOXI2'] 84448 16903 QGKKITEQM True PC9_epitope_Rep5 1061.55392988933 1061.55282993586 70.032 2 -0.8543952264170334 0.25885194657573174 1.0 ['ENST00000274026.9_1_4:122737724-122737820:-|nuORF'] 50484 1215 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 6.3458 3 -0.8544053197380519 0.2588624770889871 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 11151 6990 DEGDEYDD True PC9_epitope_Rep3 956.2883152080799 956.28776496793 31.899 1 -0.8544523573843293 0.2588730073030036 1.0 ['ENSG00000104825|ENST00000313582|NFKBIB'] 73382 7599 NEQVLRLMHS True H1975_Epitope_Rep1 1225.62374078465 1225.6226499358602 34.22 2 -0.8544830322054916 0.2589082746078654 1.0 ['SIK2|p.G352*|1|0.28|ENSG00000170145|chr11:111705091-111705107|TGGCCGCCAGCGTCGGC/-|frameshift_variant', 'ENSG00000170145|ENST00000304987|SIK2'] 45340 10427 ISDDIPLQLVT True NCI_RA007_Epitope_Rep2 1212.66016877968 1212.65906993586 45.15 2 -0.8544880275855358 0.2589082746078654 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant'] 66630 9098 LSSQIRAGLRY True PC9_epitope_Rep2 1262.7095190139398 1262.70787490379 40.337 3 -0.8545127876823254 0.2589114467160129 1.0 ['ENST00000367558.5_1_1:182572378-182573464:-|nuORF'] 106185 18320 SVPETAPAAI True PC9_epitope_Rep4 954.5022115862998 954.50110993586 78.537 2 -0.854530683619911 0.2589114467160129 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 43225 7857 IGWSWERKWEK True H1975_Epitope_Rep1 1503.7622828627898 1503.76118993586 35.174 2 -0.8545499487700744 0.2589114467160129 1.0 ['ENST00000237172.11_1_6:76203231-76203315:-|nuORF'] 30410 10623 GAFLDIAEEK True PC9_epitope_Rep6 1091.5498900547097 1091.5487899358602 51.679 2 -0.8545943723455072 0.2589361823038018 1.0 ['ENSG00000204291|ENST00000375001|COL15A1'] 137931 12640 YPSHPWSLGP True PC9_epitope_Rep1 1139.53999407735 1139.5383449037902 53.49 3 -0.8546413481508348 0.25894671042350365 1.0 ['ENST00000475468.5_1_10:79793662-79793734:+|nuORF'] 110204 6270 TIDSTGIL True NCI_RA007_Epitope_Rep5 818.43854870058 818.43744993586 30.797 2 -0.8546789659906177 0.25897144480750106 1.0 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3'] 50483 945 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 4.9339 3 -0.8547008125644059 0.25898197212711854 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 6779 5312 AQFAHSYEFY True H1975_Epitope_Rep1 1261.54038800017 1261.53874490379 25.495 3 -0.8547125176474324 0.25899198818114666 1.0 118410 19543 VDLSQHLYTFS True PC9_epitope_Rep1 1308.6350166609998 1308.6339099358602 79.995 2 -0.8547307600953276 0.25899198818114666 1.0 ['nc|ENSG00000186628|A1L4K1-2|FSD2', 'ENSG00000186628|ENST00000334574|FSD2'] 128863 8167 VSSPIAGPAQ True H1975_Epitope_Rep1 925.48689587533 925.4863449679301 36.356 1 -0.854735404262523 0.25899198818114666 1.0 ['SYNPO2|p.I1101Ffs*22|2|0.25|ENSG00000172403|chr4:119057443-119057443|C/-|frameshift_variant', 'nc|ENSG00000172403|Q9UMS6-4|SYNPO2', 'ENSG00000172403|ENST00000307142|SYNPO2', 'MSI2-SYNPO2|1|fusion', 'MSI2-SYNPO2|4|fusion', 'nc|ENSG00000172403|Q9UMS6|SYNPO2', 'nc|ENSG00000172403|Q9UMS6-3|SYNPO2', 'MSI2-SYNPO2|2|fusion', 'MSI2-SYNPO2|5|fusion', 'MSI2-SYNPO2|3|fusion', 'MSI2-SYNPO2|6|fusion', 'nc|ENSG00000172403|Q9UMS6-5|SYNPO2'] 64489 8549 LQVNKVMSILF True NCI_RA007_Epitope_Rep2 1290.73697963174 1290.73588993586 37.897 2 -0.8547465361288024 0.25899198818114666 1.0 ['ENSG00000185652|ENST00000423158|NTF3'] 33600 20661 GLLHFFFL True PC9_epitope_Rep4 992.5483739330799 992.54726993586 87.631 2 -0.8547483716171987 0.25899198818114666 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'ADGRL2|p.A1202Rfs*21|1|0.14|ENSG00000117114|chr1:81987006-81987025|CAGCTCCTGTATTTAACTCA/-|frameshift_variant', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2'] 42372 20197 IENELIKFCRE True PC9_epitope_Rep1 1392.7071360554398 1392.7060299358602 82.517 2 -0.8547997846234491 0.25903092461326477 1.0 ['GNL3-MANF|1|fusion', 'ENST00000470900.1_1_3:51423580-51426517:+|nuORF', 'ENSG00000145050|ENST00000528157|MANF'] 115230 11355 TVCTPQRPL True PC9_epitope_Rep2 1013.5328005219299 1013.53170993586 49.0 2 -0.8548432114704091 0.25905514047896366 1.0 ['ENST00000462388.5_1_1:45797680-45798503:-|nuORF', 'ENSG00000132781|ENST00000456914|MUTYH', 'nc|ENSG00000132781|Q9UIF7-5|MUTYH', 'nc|ENSG00000132781|Q9UIF7-4|MUTYH', 'nc|ENSG00000132781|Q9UIF7-3|MUTYH', 'nc|ENSG00000132781|Q9UIF7-2|MUTYH', 'nc|ENSG00000132781|Q9UIF7|MUTYH'] 117502 11324 VAERVYREI True PC9_epitope_Rep3 1133.61930702721 1133.61766490379 48.564 3 -0.854850327927361 0.25905514047896366 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6'] 72800 22726 NAHQNHNEI True PC9_epitope_Rep2 1075.4795190791099 1075.47842993586 92.912 2 -0.854871308568227 0.25905514047896366 1.0 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|154|3|sense'] 21830 5543 ESDTLSGSQSP True H1975_Epitope_Rep3 1106.47276193282 1106.47166993586 26.37 2 -0.8548803472840311 0.25905514047896366 1.0 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 98455 13456 SIKFTGRVEF True PC9_epitope_Rep5 1182.6397081186199 1182.63805490379 56.774 3 -0.8548910281082039 0.25905514047896366 1.0 ['ENSG00000239305|ENST00000237455|RNF103'] 114313 8605 TSASRLMHL True PC9_epitope_Rep5 1014.5280494946601 1014.52694993586 38.043 2 -0.8549781486162045 0.2590756732189524 1.0 ['ENST00000311085.8_2_5:118407331-118433701:+|nuORF'] 136753 22713 YIPPQVFYNG True PC9_epitope_Rep4 1196.5866099165999 1196.58550993586 95.591 2 -0.8549886572911648 0.2590756732189524 1.0 ['ENSG00000164068|ENST00000327697|RNF123', 'nc|ENSG00000164068|Q5XPI4-2|RNF123', 'RNF123|p.R733Pfs*7|1|0.14|ENSG00000164068|chr3:49705571-49705572|-/C|frameshift_variant', 'ENST00000486102.5_1_3:49728598-49742525:+|nuORF', 'ENST00000487805.6_1_3:49737640-49742607:+|nuORF'] 98861 20037 SIVDGNDDGKF True PC9_epitope_Rep1 1165.52513185885 1165.5240299358602 81.9 2 -0.8550387382828877 0.2590756732189524 1.0 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 135660 6352 YEFTFRRFFDD True H1975_Epitope_Rep1 1541.6939285194496 1541.6928299358601 29.493 2 -0.8550437409053242 0.2590756732189524 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'ENSG00000150457|ENST00000382592|LATS2'] 81851 6828 PSHSWWGQR True NCI_RA007_Epitope_Rep2 1139.5260753487098 1139.52496993586 31.175 2 -0.8550500985934428 0.2590756732189524 1.0 ['ENST00000261813.8_1_5:139625066-139625549:-|nuORF'] 112134 15182 TLVDIELI True PC9_epitope_Rep1 914.53244908542 914.53134993586 63.219 2 -0.8550509629669087 0.2590756732189524 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 127403 18149 VQQVITKE True PC9_epitope_Rep1 943.5338460677499 943.53329496793 74.6 1 -0.8551117840641188 0.2590788371135192 1.0 ['nc|ENSG00000136631|Q9NRW7-2|VPS45'] 30582 7665 GAKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 38.804 3 -0.8551294811375736 0.2590788371135192 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 79450 8457 PGPLSKQGS True PC9_epitope_Rep1 869.46068112749 869.46013496793 37.366 1 -0.8551358063017973 0.2590788371135192 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 110430 5290 TINLDGTGYHL True NCI_RA007_Epitope_Rep1 1202.59315184902 1202.5920499358601 24.659 2 -0.8551869921492057 0.25910356189285916 1.0 ['ENST00000498783.5_1_9:130687427-130690958:-|nuORF'] 105706 12122 SVHKFFNLLKE True PC9_epitope_Rep5 1360.7503211967598 1360.74922993586 51.616 2 -0.855224630321261 0.25911040418098674 1.0 ['RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'ITM2B-RB1|4|fusion', 'ITM2B-RB1|1|fusion'] 122142 17285 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 73.26 1 -0.855230136438834 0.25911040418098674 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 57039 13803 LEEFITPIV True PC9_epitope_Rep1 1059.58521293427 1059.5841099358602 57.937 2 -0.8553589555881469 0.25914932897820064 1.0 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A', 'ENST00000491510.1_1_3:25668659-25671642:-|nuORF', 'nc|ENSG00000131747|P11388-4|TOP2A', 'nc|ENSG00000077097|Q02880-2|TOP2B', 'ENSG00000077097|ENST00000264331|TOP2B'] 59388 14795 LGLHRRGRRQA True PC9_epitope_Rep2 1318.78066732194 1318.77901490379 62.172 3 -0.8554574592402515 0.25916300998310116 1.0 ['ENST00000489548.1_1_6:13272670-13278506:+|nuORF'] 124204 11568 VLAKRLCL True PC9_epitope_Rep2 914.5735431351 914.57244993586 49.821 2 -0.8554848323589906 0.25916300998310116 1.0 ['TKTL1|p.S87Cfs*38|1|0.27|ENSG00000007350|chrX:154309352-154309352|C/-|frameshift_variant'] 128644 19978 VSLLILGPQ True PC9_epitope_Rep6 938.58006798418 938.57896993586 89.51 2 -0.8555103689188938 0.25916300998310116 1.0 ['ENSG00000186806|ENST00000335624|VSIG10L', 'nc|ENSG00000186806|Q86VR7-2|VSIG10L'] 66798 4972 LSVLRPSQKT True PC9_epitope_Rep4 1127.66625721963 1127.6646149037902 25.731 3 -0.8555159580054407 0.25916300998310116 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1', 'nc|ENSG00000138688|Q2LD37-5|BLTP1', 'ENST00000482114.1_1_4:123130334-123145991:+|nuORF'] 78597 16489 PDSFNIPGSS True PC9_epitope_Rep2 1019.45598966987 1019.45488993586 68.667 2 -0.8555996765324385 0.2591698499027279 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 50480 112 KKKKKKKKKSF True H1975_Epitope_Rep1 1404.9656741269598 1404.96403490379 0.59018 3 -0.8556098982643066 0.2591698499027279 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF'] 85139 21409 QITTDITPE True PC9_epitope_Rep4 1016.5026055091199 1016.5020749679301 90.523 1 -0.8556497720228121 0.2591945698787311 1.0 ['nc|ENSG00000073712|Q96AC1-2|FERMT2', 'ENSG00000073712|ENST00000341590|FERMT2', 'nc|ENSG00000073712|Q96AC1-3|FERMT2'] 70596 7526 LYYYRDRDWRW True H1975_Epitope_Rep1 1690.8004592766597 1690.79936993586 33.946 2 -0.8556859736714737 0.2592329646300425 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 5343 7474 ALSTMRMK True NCI_RA007_Epitope_Rep1 936.4884931818 936.48738993586 33.064 2 -0.8557175045411796 0.2592329646300425 1.0 ['nc|ENSG00000178904|Q6ZPD9-2|DPY19L3', 'DPY19L3|p.G669Efs*7|1|0.48|ENSG00000178904|chr19:32482094-32482094|G/-|frameshift_variant', 'ENSG00000178904|ENST00000392250|DPY19L3', 'ENST00000590651.1_1_19:32949377-32959920:+|nuORF'] 24999 3314 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 18.294 2 -0.8557350159252841 0.2592329646300425 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 130206 9405 VTSDTVVRVP True H1975_Epitope_Rep3 1071.59242357303 1071.5913299358601 41.177 2 -0.855755755270397 0.2592329646300425 1.0 ['SERPINA5|p.E228D|1|0.38|ENSG00000188488|chr14:94590105-94590105|G/T|missense_variant'] 41722 9725 IDNIKYSTF True NCI_RA007_Epitope_Rep4 1099.55497543515 1099.5538699358601 44.252 2 -0.8557615617140083 0.2592329646300425 1.0 ['ENST00000424720.2_12:132824120-132905933:-|nuORF', 'nc|ENSG00000182870|Q9HCQ5|GALNT9', 'ENSG00000182870|ENST00000328957|GALNT9'] 24580 20364 FALSGPLFL True H1975_Epitope_Rep3 963.5429541994699 963.5424049679301 85.148 1 -0.8558030064321448 0.2592429577464789 1.0 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 109025 2852 TEWLRFYNKWL True H1975_Epitope_Rep1 1554.7983340183396 1554.79669490379 14.586 3 -0.8558214443320439 0.2592429577464789 1.0 ['nc|ENSG00000157800|Q8NCC5-3|SLC37A3', 'nc|ENSG00000157800|Q8NCC5-2|SLC37A3', 'ENSG00000157800|ENST00000326232|SLC37A3', 'ENST00000473707.5_1_7:140051761-140069464:-|nuORF', 'ENST00000464865.5_1_7:140051761-140082350:-|nuORF'] 124594 23398 VLHGGSPC True NCI_RA007_Epitope_Rep4 768.35885891124 768.35776993586 101.57 2 -0.8558453636098243 0.2592429577464789 1.0 ['ENST00000569796.1_1_16:2281646-2281928:+|nuORF'] 45745 10232 ISNASHVWKK True H1975_Epitope_Rep1 1168.63529144452 1168.6341899358601 44.301 2 -0.8558795441144832 0.2592429577464789 1.0 ['LY75|p.D138H|1|0.18|ENSG00000054219|chr2:159898742-159898742|C/G|missense_variant'] 119078 14496 VEHNRFEKPRI True PC9_epitope_Rep5 1423.7684308723897 1423.76677490379 60.759 3 -0.8558841645760543 0.2592429577464789 1.0 ['ENST00000585547.5_1_19:38182482-38190687:-|nuORF'] 71916 21017 MPRGVLRRP True H1975_Epitope_Rep3 1080.63385197588 1080.6327499358601 87.782 2 -0.8559454306830125 0.2592818707140119 1.0 ['ENST00000245960.9_1_20:3776620-3776671:+|nuORF'] 35972 22274 GVAVMKLFNKA True PC9_epitope_Rep1 1176.66890007192 1176.66780993586 90.494 2 -0.8559923407572181 0.2592887058990559 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 125853 11936 VNQLPADFRIL True NCI_RA007_Epitope_Rep1 1284.7190210684798 1284.7179299358602 50.414 2 -0.8560590584840497 0.2592887058990559 1.0 ['ENST00000342745.4_1_14:70078473-70125325:+|nuORF'] 133764 15934 WLLTWQELK True NCI_RA007_Epitope_Rep5 1215.6651945904698 1215.6640899358601 68.015 2 -0.8561004575829811 0.2593134192742348 1.0 ['ENST00000453025.1_1_1:21752008-21754429:-|nuORF'] 118701 3317 VECPPPRTTA True H1975_Epitope_Rep2 1069.52262976105 1069.5215299358601 17.43 2 -0.8561363753876899 0.25933813194769795 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'KARS1|p.R442S|1|0.35|ENSG00000065427|chr16:75631180-75631180|C/A|missense_variant'] 78617 16887 PDSSSRVSLL True PC9_epitope_Rep1 1059.55603806431 1059.5549499358601 69.782 2 -0.8561623763908862 0.25934864703711064 1.0 ['nc|ENSG00000187764|Q92854-2|SEMA4D', 'ENST00000492386.5_1_9:91977319-91992066:-|nuORF'] 106273 12030 SVQPKDSL True PC9_epitope_Rep5 872.46034677432 872.45924993586 51.267 2 -0.8561764262682257 0.25935916182796465 1.0 ['ENST00000412580.1_1_2:122466160-122466664:-|nuORF'] 91350 3120 RMPGRGKG True PC9_epitope_Rep1 857.4653896684498 857.46428993586 16.839 2 -0.8562220600091219 0.2593838727995457 1.0 ['ENST00000342502.6_2_12:99038521-99038740:-|nuORF'] 116320 12838 TVWPFAWHGLL True NCI_RA007_Epitope_Rep1 1325.6920780446499 1325.6909899358602 53.926 2 -0.8563322071786369 0.25943697562499113 1.0 ['ENST00000609898.1_1_10:45454636-45454795:-|nuORF'] 64934 16586 LSCHCHSC True PC9_epitope_Rep4 888.3040635404002 888.30296993586 71.774 2 -0.8563749945745602 0.2594438056300839 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 62706 17289 LLWYKRTRVKR True PC9_epitope_Rep4 1517.9306856005699 1517.9290349037901 74.506 3 -0.8563852892031779 0.2594438056300839 1.0 ['ENST00000473125.5_1_15:34697252-34699017:-|nuORF'] 103821 14440 SRHLCCLQAL True PC9_epitope_Rep1 1142.5688687608201 1142.56723490379 60.367 3 -0.8565430178044876 0.2594685139969337 1.0 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19'] 66899 12422 LSWREERRREE True NCI_RA007_Epitope_Rep1 1544.7807864612398 1544.77968993586 52.293 2 -0.8565748872460712 0.25947902619064517 1.0 ['ENSG00000204438|ENST00000375896|GPANK1'] 76459 5030 NTCCFCWCCC True NCI_RA007_Epitope_Rep1 1184.3040061643599 1184.30290993586 23.65 2 -0.8565854465411099 0.25948531603525854 1.0 ['ENSG00000091844|ENST00000206262|RGS17'] 134256 20319 WRRRRPGRR True NCI_RA007_Epitope_Rep1 1294.7707713445798 1294.76966993586 83.245 2 -0.8565920320436157 0.25948531603525854 1.0 ['ENSG00000110665|ENST00000381153|C11orf21'] 26297 13090 FIDLDRLLQH True H1975_Epitope_Rep3 1268.6877209402 1268.68662993586 55.593 2 -0.8565975930695668 0.25948531603525854 1.0 ['PTPRO|p.A1148D|1|0.37|ENSG00000151490|chr12:15589487-15589487|C/A|missense_variant'] 43846 22865 ILAVLLPPVM True PC9_epitope_Rep1 1064.6667748136 1064.66566993586 92.743 2 -0.8566121406959368 0.25948531603525854 1.0 ['ENSG00000091947|ENST00000206380|TMEM101'] 45368 16513 ISDLDRPTI True PC9_epitope_Rep4 1028.55022440788 1028.54912993586 71.49 2 -0.8566549681362877 0.25948531603525854 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant'] 25024 59 FDDGDCCD True PC9_epitope_Rep3 888.226583982 888.22548993586 0.34423 2 -0.8566736423804867 0.25948531603525854 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57515 19565 LEKQLLQAN True PC9_epitope_Rep5 1055.59750895347 1055.59640993586 80.306 2 -0.8568326477553181 0.25955260319082496 1.0 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 14151 19955 DSISTKLW True NCI_RA007_Epitope_Rep4 948.4916469026 948.49054993586 86.293 2 -0.8568483462822953 0.2595631129973174 1.0 ['ENST00000487694.7_2_3:77629113-77629164:+|nuORF'] 54767 11023 LAERRRRPAEV True H1975_Epitope_Rep1 1351.7796642624298 1351.77856993586 47.361 2 -0.8570569536753251 0.259644590796832 1.0 ['ENST00000205402.9_1_7:107531628-107542186:+|nuORF'] 83816 7258 QEETKTVL True PC9_epitope_Rep1 946.4971262058599 946.49602993586 32.731 2 -0.8571307423653272 0.2596718798785161 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 56715 6754 LEAFAHTDLS True NCI_RA007_Epitope_Rep1 1102.5294889632999 1102.52838993586 30.281 2 -0.857131500674881 0.2596718798785161 1.0 ['ENSG00000132703|ENST00000255040|APCS'] 134257 20428 WRRRRPGRR True NCI_RA007_Epitope_Rep1 1294.7707713445798 1294.76966993586 83.671 2 -0.8571351825026041 0.2596718798785161 1.0 ['ENSG00000110665|ENST00000381153|C11orf21'] 4188 8241 AIDFSRQEWE True PC9_epitope_Rep4 1279.58331544131 1279.5816749037901 39.16 3 -0.8571730326980241 0.2596718798785161 1.0 ['ENSG00000189144|ENST00000536220|ZNF573'] 6544 6557 APVLHLRGSP True PC9_epitope_Rep2 1045.6032630402499 1045.60216993586 30.634 2 -0.8571851851037616 0.2596718798785161 1.0 ['ENST00000562370.5_1_16:583983-597374:+|nuORF', 'ENST00000219611.6_1_16:586082-597374:+|nuORF'] 57084 4017 LEELEESRHK True H1975_Epitope_Rep3 1268.6360792901598 1268.6349899358602 20.576 2 -0.857199246564226 0.2596718798785161 1.0 ['SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A'] 11887 21244 DHQERMIRG True H1975_Epitope_Rep1 1140.5458248171199 1140.54418490379 88.261 3 -0.8572078166143751 0.2596718798785161 1.0 ['ENST00000421692.5_2_6:30003742-30025305:-|nuORF', 'ENST00000431012.5_1_6:30024744-30025305:-|nuORF'] 37689 6454 HALNEVDPG True PC9_epitope_Rep5 950.4457593393399 950.44466993586 29.8 2 -0.8572092933329238 0.2596718798785161 1.0 ['ENSG00000142207|ENST00000382751|URB1'] 46478 12396 ITNWEREFRTW True H1975_Epitope_Rep1 1536.74736107464 1536.74626993586 52.715 2 -0.8572217282707139 0.2596928928247048 1.0 ['ENSG00000124177|ENST00000373233|CHD6', 'nc|ENSG00000124177|Q8TD26-3|CHD6'] 46699 13870 ITYDFSFKSS True H1975_Epitope_Rep1 1193.56045473841 1193.5593499358602 58.5 2 -0.8572224425089937 0.2596928928247048 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 32935 10208 GIQWSHTG True PC9_epitope_Rep5 884.4140652882401 884.41296993586 44.254 2 -0.8572406661109234 0.2597028480608495 1.0 ['ENST00000561209.1_1_15:85801832-85803322:-|nuORF'] 126291 8752 VPHRLCAP True PC9_epitope_Rep3 891.4748917229899 891.4737899358599 38.618 2 -0.8573063409281078 0.2597028480608495 1.0 ['ENST00000216799.8_1_14:24608772-24610662:-|nuORF', 'ENST00000419198.6_1_14:24608772-24610646:-|nuORF'] 92873 14499 RRLWWYHWICW True NCI_RA007_Epitope_Rep2 1703.82959166031 1703.82848993586 61.059 2 -0.8573350770009155 0.2597028480608495 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 90236 10563 RHNLGGNLGDP True H1975_Epitope_Rep2 1148.56866843668 1148.56756993586 45.652 2 -0.8573393759320872 0.2597028480608495 1.0 ['nc|ENSG00000204580|Q08345-2|DDR1', 'nc|ENSG00000204580|Q08345-6|DDR1', 'ENSG00000204580|ENST00000376568|DDR1', 'nc|ENSG00000204580|Q08345-5|DDR1'] 110180 22073 TIDPAFLID True PC9_epitope_Rep2 1003.52261267771 1003.52150993586 90.377 2 -0.8573426326074272 0.2597028480608495 1.0 ['ENST00000524269.1_1_8:77488797-77488881:-|nuORF'] 104171 21194 SSCMILCSPC True NCI_RA007_Epitope_Rep5 1042.39558096674 1042.39448993586 88.557 2 -0.8573686246194339 0.2597054316363017 1.0 ['ENST00000487682.5_1_1:156905794-156908468:-|nuORF'] 46358 4312 ITGWSEPFPP True H1975_Epitope_Rep2 1129.54441075145 1129.5427649037902 21.697 3 -0.8574054884376863 0.2597054316363017 1.0 ['ENSG00000106128|ENST00000326139|GHRHR'] 131540 23562 VVVGVGLIVG True PC9_epitope_Rep6 910.5851533646199 910.58404993586 103.77 2 -0.8574206685962488 0.2597054316363017 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 82463 13818 PVDQLIAV True PC9_epitope_Rep5 853.4909186266099 853.48982993586 58.169 2 -0.8574539026197877 0.2597054316363017 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 78598 16344 PDSFNIPGSS True PC9_epitope_Rep2 1019.45598966987 1019.4554749679301 68.112 1 -0.8574587017162029 0.2597054316363017 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 46172 10704 ITDENPEV True PC9_epitope_Rep1 915.41854153199 915.41744993586 46.062 2 -0.857478161755711 0.2597054316363017 1.0 ['DSE|p.G424Dfs*61|2|0.12|ENSG00000111817|chr6:116435734-116435734|G/-|frameshift_variant', 'ENST00000607094.1_1_6:116600797-116720830:+|nuORF', 'ENSG00000111817|ENST00000644252|DSE', 'DSE|p.Q744Rfs*35|1|0.21|ENSG00000111817|chr6:116436697-116436698|AC/G|frameshift_variant'] 23337 7021 EVTEVLLD True NCI_RA007_Epitope_Rep3 916.4753281321199 916.47422993586 34.733 2 -0.8574919416178366 0.2597054316363017 1.0 ['ENSG00000070729|ENST00000251102|CNGB1', 'nc|ENSG00000070729|Q14028-4|CNGB1'] 36380 7411 GVHTWTSA True PC9_epitope_Rep3 857.40316625137 857.40206993586 33.513 2 -0.8575580203708423 0.25972275429560576 1.0 ['ENST00000353265.7_1_18:77918240-77960703:-|nuORF'] 84312 24746 QFKLLLVRIYC True NCI_RA007_Epitope_Rep5 1394.8108132783398 1394.8097099358602 102.67 2 -0.8575599755309018 0.25972275429560576 1.0 ['ENST00000549711.5_1_12:112487373-112518932:-|nuORF', 'nc|ENSG00000111300|Q14CX7-2|NAA25', 'ENST00000552527.5_1_12:112478245-112546577:-|nuORF', 'ENSG00000111300|ENST00000261745|NAA25'] 35979 9897 GVAVRVGGVI True NCI_RA007_Epitope_Rep3 925.5709002828098 925.56980993586 46.01 2 -0.8575710566960767 0.25972275429560576 1.0 ['ENST00000370351.8_1_20:61598972-61599257:+|nuORF'] 134751 3880 WWWSWRWWKLQ True PC9_epitope_Rep4 1746.85718630714 1746.8560899358602 21.107 2 -0.8576477089504876 0.2597295725089031 1.0 ['chr12:54282611-54283827|502|64.93|0.0|22.63|+|1|HNRNPA1,HNRNPA1|1'] 117334 8986 VAALFTFP True NCI_RA007_Epitope_Rep5 864.47454028648 864.47344993586 41.222 2 -0.8576526006079732 0.2597295725089031 1.0 ['L1MB7_dup7884|chr6:109271511-109272669:-|1.663382698896682|0.075209377654616|4.47|479.0|50|1|anti-sense'] 56966 12282 LEDYYHFYHSK True NCI_RA007_Epitope_Rep2 1500.66737941844 1500.66628993586 52.377 2 -0.8577136717430834 0.25974007548026445 1.0 ['ENSG00000140479|ENST00000611716|PCSK6', 'nc|ENSG00000140479|P29122-2|PCSK6', 'nc|ENSG00000140479|P29122-7|PCSK6', 'nc|ENSG00000140479|P29122-3|PCSK6', 'nc|ENSG00000140479|P29122-5|PCSK6', 'nc|ENSG00000140479|P29122-4|PCSK6', 'nc|ENSG00000140479|P29122-8|PCSK6'] 137723 27609 YNCFLVALYGK True H1975_Epitope_Rep2 1289.6478302741696 1289.64619490379 114.56 3 -0.8578421841512898 0.259807329426954 1.0 ['ENST00000218340.3_1_X:46739574-46739718:+|nuORF'] 132663 17695 VYQVRWLRP True PC9_epitope_Rep6 1215.68766137055 1215.68656993586 80.699 2 -0.8578580755313011 0.2598178309971057 1.0 ['ENST00000463900.5_1_2:74753929-74756164:-|nuORF', 'ENSG00000115307|ENST00000377526|AUP1', 'ENST00000466894.5_1_2:74754206-74756164:-|nuORF', 'nc|ENSG00000115307|Q9Y679-3|AUP1'] 94129 4877 RWFLYPPEK True NCI_RA007_Epitope_Rep5 1234.6498788794995 1234.6482449037899 25.453 3 -0.8578872246158771 0.25984251968503935 1.0 ['nc|ENSG00000161999|Q96S16-2|JMJD8', 'ENSG00000161999|ENST00000609261|JMJD8', 'ENST00000569441.5_1_16:732796-733478:-|nuORF', 'ENST00000568689.5_1_16:732830-733478:-|nuORF', 'ENST00000565302.5_1_16:732919-733769:-|nuORF'] 9176 5439 AVPAPEEESF True H1975_Epitope_Rep1 1074.48695544498 1074.4858499358602 25.98 2 -0.857911853197053 0.25984933391972986 1.0 ['PNMA2|p.P213Lfs*8|1|0.36|ENSG00000240694|chr8:26508118-26508118|G/-|frameshift_variant', 'ENSG00000240694|ENST00000522362|PNMA2'] 92267 5357 RQLDSTYFR True NCI_RA007_Epitope_Rep4 1184.59382055536 1184.59216490379 27.173 3 -0.8579288192539368 0.25984933391972986 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22', 'RGS22|p.K902Nfs*4|1|0.26|ENSG00000132554|chr8:100002282-100002286|TAGAT/-|frameshift_variant', 'ENST00000519421.1_1_8:101015243-101020719:-|nuORF'] 124068 21277 VKRLLKKQVVR True H1975_Epitope_Rep1 1365.92962297141 1365.92797490379 88.39 3 -0.8580098407824773 0.2598845209890905 1.0 ['ENSG00000175931|ENST00000319380|UBE2O', 'UBE2O|p.H1018Tfs*12|1|0.15|ENSG00000175931|chr17:76392008-76392008|G/-|frameshift_variant'] 31784 17259 GELQAQVKKNQ True PC9_epitope_Rep4 1241.67279915205 1241.67170993586 74.393 2 -0.8580105321329053 0.2598845209890905 1.0 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'ENSG00000261794|ENST00000566740|GOLGA8H'] 130763 12778 VVDTPELL True H1975_Epitope_Rep2 884.4854988929999 884.48440993586 54.254 2 -0.8580171031642717 0.2598950205702937 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 5444 4409 ALYGGQMA True NCI_RA007_Epitope_Rep5 809.37417462221 809.37306993586 23.589 2 -0.8581121393598676 0.2599160188390172 1.0 ['ENSG00000283039|ENST00000634670|KLF18'] 127260 10830 VQKQLEVIN True PC9_epitope_Rep3 1069.6131590176099 1069.61206993586 46.63 2 -0.8581131737686699 0.2599160188390172 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B', 'ENST00000251181.8_1_14:105360511-105361292:+|nuORF'] 56675 20599 LEAATMLCVN True PC9_epitope_Rep1 1063.50420281559 1063.50310993586 84.049 2 -0.8581750221464621 0.25992595429592746 1.0 ['FAM98A|p.R123T|1|0.17|ENSG00000119812|chr2:33588489-33588489|C/G|missense_variant'] 40855 21440 HVLQPQLPPP True PC9_epitope_Rep3 1124.6342288153598 1124.63312993586 87.76 2 -0.8581986102596473 0.25992595429592746 1.0 ['ENSG00000197576|ENST00000360046|HOXA4'] 119361 19383 VENIVKLYK True PC9_epitope_Rep1 1104.6542955536 1104.6531899358602 79.366 2 -0.8582031658722642 0.25992595429592746 1.0 ['nc|ENSG00000155085|Q5TCS8-2|AK9', 'nc|ENSG00000155085|Q5TCS8-1|AK9', 'nc|ENSG00000155085|Q5TCS8-3|AK9', 'nc|ENSG00000155085|Q5TCS8-6|AK9', 'ENSG00000155085|ENST00000424296|AK9'] 27557 22316 FPLMEPLFKK True PC9_epitope_Rep4 1248.6940521905997 1248.69294993586 94.078 2 -0.8582284930988207 0.25992595429592746 1.0 ['ENST00000233154.8_1_2:106509734-106510046:+|nuORF'] 93315 10484 RRSARWPWPER True H1975_Epitope_Rep2 1495.7908976524698 1495.78924490379 45.345 3 -0.8582323149789101 0.25992595429592746 1.0 ['HTR1A|p.V295Cfs*50|2|0.23|ENSG00000178394|chr5:63960837-63960837|C/-|frameshift_variant'] 100536 11290 SLPTAPLAP True NCI_RA007_Epitope_Rep4 865.49091862661 865.49037496793 50.322 1 -0.8582742165277685 0.25993645209793187 1.0 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 19931 13045 ELYMRRLRSTK True NCI_RA007_Epitope_Rep1 1451.8031021289496 1451.80200993586 54.734 2 -0.858325038199114 0.2599395753251727 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.P1652Rfs*13|1|0.38|ENSG00000042781|chr1:216086751-216086751|G/-|frameshift_variant'] 64488 8094 LQVNKVMSILF True H1975_Epitope_Rep3 1290.73697963174 1290.73588993586 36.107 2 -0.8583448366561871 0.2599395753251727 1.0 ['ENSG00000185652|ENST00000423158|NTF3'] 22212 6794 ETDISVLEEPG True H1975_Epitope_Rep1 1187.55576328079 1187.5546699358601 31.176 2 -0.8583579535274237 0.2599395753251727 1.0 ['ENST00000394434.6_1_5:145523903-145524189:-|nuORF'] 97572 6960 SGVTITEL True PC9_epitope_Rep6 818.43854870058 818.43744993586 35.722 2 -0.8583999590066554 0.2599642563331537 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'TNR|p.D691Efs*23|1|0.14|ENSG00000116147|chr1:175366117-175366119|AGG/T|frameshift_variant', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.S583Mfs*29|1|0.13|ENSG00000116147|chr1:175386061-175386062|-/A|frameshift_variant'] 64811 9417 LRYLTIMNRQV True NCI_RA007_Epitope_Rep3 1405.78638943565 1405.7852899358602 44.124 2 -0.8584121848487292 0.259988936640994 1.0 ['nc|ENSG00000225997|P0C604|OR4A8'] 107800 5340 TAPDAAADP True H1975_Epitope_Rep3 827.3661120363099 827.36556496793 25.61 1 -0.8584640064201944 0.2600136162487235 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B'] 121646 10613 VGLGLTYA True NCI_RA007_Epitope_Rep5 792.4381547777599 792.43760496793 47.461 1 -0.8584785466505427 0.26005247854762076 1.0 ['ENSG00000006071|ENST00000389817|ABCC8', 'nc|ENSG00000006071|Q09428-2|ABCC8', 'ABCC8|p.L1288Q|1|0.27|ENSG00000006071|chr11:17397688-17397688|A/T|missense_variant'] 135692 3162 YEIENGVVWV True NCI_RA007_Epitope_Rep1 1206.59208921986 1206.59044490379 16.191 3 -0.858537177086734 0.2600876508715447 1.0 ['nc|ENSG00000171560|P02671|FGA'] 61330 7361 LLEEETEP True H1975_Epitope_Rep3 958.4495073070999 958.44840993586 33.289 2 -0.8585468364771404 0.2600876508715447 1.0 ['nc|ENSG00000100583|Q9P1V8-2|SAMD15', 'ENSG00000100583|ENST00000216471|SAMD15'] 87233 5356 QSQALHYR True NCI_RA007_Epitope_Rep2 1001.50427727497 1001.50318993586 25.453 2 -0.8585861409622659 0.26014069325466616 1.0 ['ENSG00000135090|ENST00000392533|TAOK3', 'TAOK3|p.T656*|1|0.79|ENSG00000135090|chr12:118161955-118161964|CTCGGGTGGA/-|frameshift_variant'] 90324 5154 RIESLEQEK True NCI_RA007_Epitope_Rep2 1130.59315184902 1130.5920499358601 24.667 2 -0.8586079657907675 0.26015118637337076 1.0 ['nc|ENSG00000058272|O14974-5|PPP1R12A', 'nc|ENSG00000058272|O14974-4|PPP1R12A', 'nc|ENSG00000058272|O14974-3|PPP1R12A', 'nc|ENSG00000058272|O14974-2|PPP1R12A', 'ENSG00000058272|ENST00000450142|PPP1R12A'] 19602 16661 ELRKLPVP True PC9_epitope_Rep3 950.5913013742198 950.59020993586 69.223 2 -0.8586158591141392 0.2601616791944405 1.0 ['ENSG00000117408|ENST00000372343|IPO13'] 119206 9854 VEKMQQRQDRR True H1975_Epitope_Rep1 1472.7630282221198 1472.76192993586 42.836 2 -0.8586472223699763 0.2601752843406983 1.0 ['ENST00000468290.1_1_9:136198707-136199617:-|nuORF', 'ENSG00000148296|ENST00000372022|SURF6'] 109222 8159 TFTPGRTP True PC9_epitope_Rep6 875.45011644379 875.44900993586 40.929 2 -0.8586500550213736 0.2601752843406983 1.0 ['ENST00000521792.2_1_8:43126156-43127029:-|nuORF'] 60817 23727 LKKKKKKKKK True H1975_Epitope_Rep2 1283.94929578683 1283.9476649037902 97.767 3 -0.8586637815111545 0.2601752843406983 1.0 ['ENST00000344423.9_1_8:28205640-28205820:-|nuORF', 'ENST00000378289.8_1_10:14940166-14940367:-|nuORF'] 100757 10154 SLRNRNVK True PC9_epitope_Rep5 985.57811092157 985.57700993586 44.044 2 -0.8586944411250348 0.2601752843406983 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 128978 23463 VSVVAYLALA True PC9_epitope_Rep6 1004.5906326678798 1004.59007496793 103.36 1 -0.8587125719795492 0.2601857760760122 1.0 ['ENSG00000139970|ENST00000267484|RTN1', 'ENST00000557422.1_1_14:60070629-60097278:-|nuORF', 'SAMD12-RTN1|1|fusion', 'ENST00000474911.5_1_14:60063465-60074250:-|nuORF', 'nc|ENSG00000139970|Q16799-3|RTN1', 'nc|ENSG00000139970|Q16799-2|RTN1', 'ENST00000432103.6_1_14:60063465-60194426:-|nuORF'] 80446 19938 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 83.449 3 -0.8587423263766251 0.2602104486924953 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 56885 9342 LEDMAERFH True PC9_epitope_Rep5 1146.51279335334 1146.51115490379 40.887 3 -0.8587613819269665 0.2602203598927979 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-6|SYNE1', 'nc|ENSG00000131018|Q8NF91-5|SYNE1', 'SYNE1|p.L979*|1|0.28|ENSG00000131018|chr6:152453678-152453678|G/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 82905 8560 PVYVPYEIR True PC9_epitope_Rep1 1134.60734536118 1134.60568490379 37.764 3 -0.8587970090821281 0.2602203598927979 1.0 ['ENST00000468328.5_1_1:204951018-204956638:+|nuORF', 'nc|ENSG00000163531|O94856|NFASC', 'nc|ENSG00000163531|O94856-8|NFASC', 'nc|ENSG00000163531|O94856-5|NFASC', 'nc|ENSG00000163531|O94856-13|NFASC', 'nc|ENSG00000163531|O94856-7|NFASC', 'ENSG00000163531|ENST00000339876|NFASC', 'nc|ENSG00000163531|O94856-6|NFASC', 'nc|ENSG00000163531|O94856-11|NFASC', 'nc|ENSG00000163531|O94856-3|NFASC', 'nc|ENSG00000163531|O94856-10|NFASC', 'nc|ENSG00000163531|O94856-12|NFASC', 'nc|ENSG00000163531|O94856-4|NFASC', 'ENST00000512826.5_1_1:204926851-204957975:+|nuORF', 'ENST00000404977.6_1_1:204937408-204955114:+|nuORF'] 72596 13646 MVRTCCGVLT True PC9_epitope_Rep2 1081.50824265021 1081.50714993586 57.781 2 -0.8587979639317994 0.2602203598927979 1.0 ['nc|ENSG00000160224|O43918-3|AIRE'] 87545 18458 QTITKQYYRR True PC9_epitope_Rep5 1355.73098273451 1355.72988993586 76.02 2 -0.8588170606588341 0.2602203598927979 1.0 ['nc|ENSG00000139998|P59190-2|RAB15', 'ENSG00000139998|ENST00000533601|RAB15'] 120955 4291 VGELVKVTK True NCI_RA007_Epitope_Rep4 971.60153170475 971.60042993586 22.839 2 -0.8588280402627919 0.2602203598927979 1.0 ['ENSG00000167193|ENST00000300574|CRK'] 130868 25027 VVGRIRNKP True NCI_RA007_Epitope_Rep5 1037.6457965585698 1037.64468993586 103.77 2 -0.8588740441902032 0.2602592098919486 1.0 ['nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 46582 9511 ITRSERYVCAV True H1975_Epitope_Rep1 1295.6656055966303 1295.66450993586 41.505 2 -0.8589014759234598 0.2602696992470542 1.0 ['ENST00000596477.1_1_19:50059010-50060533:-|nuORF', 'ENSG00000142546|ENST00000596358|NOSIP'] 110655 10061 TIVNGTQTNP True PC9_epitope_Rep3 1043.52473793603 1043.52364993586 43.655 2 -0.8589104923140943 0.260272807191674 1.0 ['CKAP2L|p.T445I|1|0.38|ENSG00000169607|chr2:112756037-112756037|G/A|missense_variant'] 32874 16650 GILKATTP True PC9_epitope_Rep1 799.48035394291 799.47980496793 68.874 1 -0.8589112912056204 0.260272807191674 1.0 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2', 'N4BP2|p.P1251S|1|0.21|ENSG00000078177|chr4:40121862-40121862|C/T|missense_variant'] 129565 16811 VTGGYDYD True PC9_epitope_Rep3 888.350127619 888.34902993586 69.814 2 -0.8589158234562007 0.260272807191674 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 80407 13790 PLIRQIQT True PC9_epitope_Rep1 967.58146496651 967.58036993586 57.888 2 -0.8589794517388956 0.2603116536929119 1.0 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI', 'nc|ENSG00000112531|Q96PU8-9|QKI', 'nc|ENSG00000112531|Q96PU8-8|QKI', 'nc|ENSG00000112531|Q96PU8-3|QKI', 'ENSG00000112531|ENST00000361752|QKI', 'QKI|p.A261T|1|0.16|ENSG00000112531|chr6:163563566-163563566|G/A|missense_variant'] 100419 14013 SLPARQLLA True PC9_epitope_Rep5 967.58146496651 967.58036993586 58.919 2 -0.8590139331640133 0.2603221415607985 1.0 ['ENST00000476731.1_1_1:45267326-45268846:+|nuORF', 'PLK3|p.N338Qfs*4|1|0.18|ENSG00000173846|chr1:44803324-44803325|-/C|frameshift_variant', 'ENST00000465443.5_1_1:45266117-45270174:+|nuORF', 'ENSG00000173846|ENST00000372201|PLK3'] 78807 12929 PENLYNDRMFR True NCI_RA007_Epitope_Rep1 1453.67723290949 1453.6761299358602 54.281 2 -0.8590502081814189 0.26032893804055013 1.0 ['ENST00000518876.1_1_8:97243285-97244208:-|nuORF', 'ENST00000519322.1_1_8:97243965-97247767:-|nuORF', 'ENSG00000156467|ENST00000287022|UQCRB', 'nc|ENSG00000156467|P14927-2|UQCRB'] 61316 5114 LLEATAKP True H1975_Epitope_Rep1 841.4909186266099 841.48982993586 24.741 2 -0.859056871893135 0.26032893804055013 1.0 ['ENSG00000136770|ENST00000376980|DNAJC1'] 66301 8619 LSQKPQVLGPE True NCI_RA007_Epitope_Rep1 1194.66083748602 1194.65920490379 37.526 3 -0.8590885973217703 0.2603394252172803 1.0 ['ENSG00000105497|ENST00000262259|ZNF175'] 138092 18906 YQFGEIRTI True PC9_epitope_Rep1 1125.5818588893299 1125.5807699358602 77.507 2 -0.8591207364533542 0.26034873830450805 1.0 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 13027 10820 DLQRVKQEL True PC9_epitope_Rep2 1127.62987171091 1127.6287699358602 46.938 2 -0.8591331268474398 0.26034873830450805 1.0 ['ENSG00000125753|ENST00000245932|VASP', 'ENST00000588273.1_1_19:46027302-46029432:+|nuORF'] 13543 11533 DPKHLPPLP True PC9_epitope_Rep1 1012.5705659296399 1012.56946993586 49.241 2 -0.8591403161008225 0.26034873830450805 1.0 ['ENST00000478246.1_1_9:35562293-35562500:-|nuORF', 'ENSG00000215187|ENST00000399742|FAM166B'] 32118 5302 GEYLCMCG True H1975_Epitope_Rep3 874.3023322048999 874.30122993586 25.473 2 -0.8591461513981709 0.26034873830450805 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'OBSCN|p.H4054Tfs*31|1|0.21|ENSG00000154358|chr1:228307133-228307133|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 59545 11833 LGQRVWDWWHR True PC9_epitope_Rep6 1537.76909957873 1537.7680099358602 56.721 2 -0.8591646599530401 0.26034873830450805 1.0 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 99353 10994 SLDSDFTFTL True H1975_Epitope_Rep2 1144.52882025696 1144.5277299358602 47.315 2 -0.8591671486284063 0.26034873830450805 1.0 ['ENSG00000117500|ENST00000370282|TMED5', 'nc|ENSG00000117500|Q9Y3A6-2|TMED5'] 21738 9292 ESASFAAV True H1975_Epitope_Rep2 780.3653837603199 780.36483496793 40.7 1 -0.8591988087186886 0.26034873830450805 1.0 ['nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|O94854-4|MACF1'] 59503 19091 LGPLLDVVKE True PC9_epitope_Rep4 1081.63831113629 1081.63720993586 81.524 2 -0.8592092102553682 0.26034873830450805 1.0 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79553706-79569486:-|nuORF'] 56444 11519 LDSMRELPPLS True NCI_RA007_Epitope_Rep1 1256.64347316972 1256.6423699358602 48.774 2 -0.859239352531042 0.26034873830450805 1.0 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 81891 15424 PSLLDDDGY True PC9_epitope_Rep5 993.4291062156899 993.42800993586 64.337 2 -0.8593071263290175 0.2603733998667442 1.0 ['EPB41L3|p.P944Tfs*4|1|0.25|ENSG00000082397|chr18:5397069-5397070|-/T|frameshift_variant', 'ENSG00000082397|ENST00000341928|EPB41L3'] 24515 13075 FAKFTFEYSRR True NCI_RA007_Epitope_Rep1 1450.7357337617798 1450.73462993586 54.852 2 -0.8593423187334162 0.260398060729778 1.0 ['ENSG00000079557|ENST00000226355|AFM'] 140048 27296 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 114.28 3 -0.8593788264039989 0.2604190292583352 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 39644 10402 HPQKPIRLP True PC9_epitope_Rep2 1084.6505475858398 1084.64944993586 45.334 2 -0.8594075400364166 0.2604190292583352 1.0 ['ENST00000337929.7_1_16:27413553-27413916:+|nuORF'] 24856 19750 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 82.201 2 -0.8594618929781861 0.26042582144983417 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18554 10896 EKVFPDAVDP True H1975_Epitope_Rep3 1115.5498900547097 1115.5487899358602 46.996 2 -0.8594733469752156 0.26042582144983417 1.0 ['ENSG00000132122|ENST00000371847|SPATA6', 'nc|ENSG00000132122|Q9NWH7-2|SPATA6'] 13574 10860 DPPDNLAE True H1975_Epitope_Rep2 869.37667672001 869.3761249679301 46.803 1 -0.8594893720248362 0.26044678800249477 1.0 ['KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant'] 62416 23316 LLRYMVKQL True PC9_epitope_Rep1 1162.6896355165 1162.68799490379 94.475 3 -0.8594988445046036 0.26044678800249477 1.0 ['ENSG00000123360|ENST00000243052|PDE1B'] 68045 11960 LTNHRKIY True H1975_Epitope_Rep2 1043.58761297611 1043.58650993586 51.083 2 -0.8595299934214048 0.26045727083303805 1.0 ['nc|ENSG00000213096|O75437-2|ZNF254', 'ENSG00000213096|ENST00000357002|ZNF254', 'ZNF254|p.T224I|1|0.11|ENSG00000213096|chr19:24126671-24126671|C/T|missense_variant', 'ZNF254|p.S223L|1|0.58|ENSG00000213096|chr19:24126668-24126668|C/T|missense_variant', 'ZNF254|p.E235Q|2|0.33|ENSG00000213096|chr19:24126703-24126703|G/C|missense_variant', 'ZNF254|p.G412Afs*15|2|0.13|ENSG00000213096|chr19:24127234-24127234|G/-|frameshift_variant'] 42830 15844 IFLFFFLYLCW True PC9_epitope_Rep2 1510.7723025112998 1510.77120993586 66.202 2 -0.8595683279332159 0.2604819277108434 1.0 ['chr7:50504059-50513259|115|12.32|0.0|20.23|-|1|TE_info:L1PB1,L1PB1_dup5738,L1,LINE,donor,+,50513259,50517927|DDC,None|63'] 109112 9884 TFGVMWAFL True NCI_RA007_Epitope_Rep5 1070.52592423634 1070.52482993586 44.663 2 -0.8596498462474442 0.26052075803319585 1.0 ['ENST00000546562.5_1_12:53709537-53714427:-|nuORF'] 57749 10256 LENQNTQEIP True PC9_epitope_Rep6 1184.567331024 1184.56622993586 50.12 2 -0.8596801387744691 0.26052754666704464 1.0 ['nc|ENSG00000109684|Q7Z7G1-3|CLNK', 'ENSG00000109684|ENST00000226951|CLNK'] 128733 15468 VSPRGLGR True H1975_Epitope_Rep2 840.49298431528 840.49188993586 64.654 2 -0.8596995329996309 0.26052754666704464 1.0 ['ENST00000415993.5_1_22:50688078-50689256:-|nuORF', 'ENST00000483222.5_1_22:50687938-50689256:-|nuORF', 'ENST00000429374.5_1_22:50686861-50689256:-|nuORF', 'ENST00000216271.9_1_22:50688078-50689256:-|nuORF', 'ENST00000496909.5_1_22:50687618-50689256:-|nuORF', 'ENST00000498366.5_1_22:50686861-50689256:-|nuORF'] 66607 10530 LSSPCDNRVP True PC9_epitope_Rep3 1086.51279335334 1086.5116899358602 45.443 2 -0.8597633818850599 0.26053802761005757 1.0 ['ENSG00000139318|ENST00000279488|DUSP6', 'nc|ENSG00000139318|Q16828-2|DUSP6'] 102147 19648 SPRLPGSFPQL True PC9_epitope_Rep5 1197.65060715549 1197.64897490379 80.632 3 -0.8598574234750542 0.26054481546572933 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3'] 82521 14285 PVFCMPEEVL True PC9_epitope_Rep4 1162.54025397114 1162.53914993586 62.848 2 -0.8598853225784772 0.26054481546572933 1.0 ['ENSG00000137955|ENST00000319942|RABGGTB'] 64926 17594 LSCHCHSC True PC9_epitope_Rep2 888.3040635404002 888.30296993586 72.954 2 -0.8599142828472724 0.2605552957183554 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 57855 11453 LEQEEKLKAK True H1975_Epitope_Rep1 1214.6870522338597 1214.6859499358602 49.034 2 -0.860008027382452 0.26060460040533456 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'ENST00000471347.5_1_1:15654853-15671627:+|nuORF'] 97109 14670 SFDLYTPER True H1975_Epitope_Rep3 1126.5294889632999 1126.52838993586 61.796 2 -0.8600126126975515 0.26060460040533456 1.0 ['TECPR1|p.A682D|1|0.33|ENSG00000205356|chr7:98231303-98231303|G/T|missense_variant'] 27116 11586 FLQKHLDL True H1975_Epitope_Rep2 1012.57056592964 1012.56946993586 49.63 2 -0.8601022837706644 0.2606385239977894 1.0 ['ENSG00000158006|ENST00000374282|PAFAH2'] 126087 15525 VPDILWIPP True H1975_Epitope_Rep2 1048.59571804832 1048.5946299358602 64.872 2 -0.8601207159764199 0.2606385239977894 1.0 ['ENST00000446848.6_1_7:26412554-26412734:+|nuORF'] 904 4905 ADNIERLKAND True NCI_RA007_Epitope_Rep2 1257.6313282628898 1257.62968490379 23.701 3 -0.8601309940303099 0.2606385239977894 1.0 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 30909 7469 GASATQAQAW True PC9_epitope_Rep2 989.4566583762097 989.45556993586 34.102 2 -0.8601532706857457 0.2606385239977894 1.0 ['ENST00000491370.1_1_2:220435199-220436548:-|nuORF'] 122187 10762 VGRLHGSVPNL True NCI_RA007_Epitope_Rep3 1147.64619048139 1147.6450899358601 49.378 2 -0.8601564009626695 0.2606385239977894 1.0 ['ENSG00000006025|ENST00000007414|OSBPL7', 'ENST00000583167.5_1_17:45893705-45894118:-|nuORF', 'ENST00000580808.1_1_17:45893705-45894250:-|nuORF', 'nc|ENSG00000006025|Q9BZF2-2|OSBPL7'] 109467 11532 TGVLLQKI True H1975_Epitope_Rep2 870.5538532363399 870.55274993586 49.417 2 -0.8602257270607823 0.2606385239977894 1.0 ['nc|ENSG00000156414|Q8NDG6-2|TDRD9', 'ENSG00000156414|ENST00000409874|TDRD9'] 96074 8523 SEDEFGSDH True H1975_Epitope_Rep2 1021.3624832078499 1021.36138993586 37.738 2 -0.8602408848314212 0.2606385239977894 1.0 ['ENST00000502249.6_1_4:119435248-119475252:+|nuORF'] 3113 12342 AGATPEPWGNP True PC9_epitope_Rep5 1095.49852318819 1095.49742993586 52.467 2 -0.8602847099989253 0.2606385239977894 1.0 ['ENSG00000124203|ENST00000371030|ZNF831', 'ZNF831|p.D1025Gfs*9|1|0.42|ENSG00000124203|chr20:59194084-59194085|-/G|frameshift_variant', 'ZNF831|p.S1319Pfs*7|1|0.08|ENSG00000124203|chr20:59206984-59206985|AG/-|frameshift_variant'] 19681 10697 ELSCTRGGCL True PC9_epitope_Rep1 1037.46340063277 1037.46230993586 46.036 2 -0.8603032642413283 0.2606385239977894 1.0 ['ENSG00000160999|ENST00000444095|SH2B2', 'nc|ENSG00000160999|O14492-2|SH2B2'] 83980 14573 QELQQIII True PC9_epitope_Rep5 983.5651461960299 983.56404993586 61.055 2 -0.8603090956852854 0.2606385239977894 1.0 ['ENSG00000179134|ENST00000610417|SAMD4B'] 69114 17765 LVKYPVLLK True PC9_epitope_Rep1 1071.7056028504699 1071.7045099358602 73.13 2 -0.8603497641593376 0.2606490009919229 1.0 ['NET1|p.L320V|1|0.07|ENSG00000173848|chr10:5454454-5454454|T/G|missense_variant'] 129070 9524 VTAQIGIV True PC9_epitope_Rep2 799.4803539429099 799.47924993586 41.982 2 -0.8603831216883762 0.2606594776891358 1.0 ['ENSG00000167332|ENST00000396950|OR51E2'] 118406 8743 VDLPFMYSI True PC9_epitope_Rep1 1083.53106918643 1083.5299699358602 38.468 2 -0.8604181611736698 0.2606632385647302 1.0 ['ENSG00000165125|ENST00000359396|TRPV6', 'nc|ENSG00000165125|Q9H1D0-2|TRPV6'] 37115 2564 GVSTDSGTQET True PC9_epitope_Rep4 1080.45711186868 1080.45600993586 14.774 2 -0.8605075293797113 0.2606632385647302 1.0 ['ENSG00000169641|ENST00000302291|LUZP1', 'nc|ENSG00000169641|Q86V48-2|LUZP1', 'nc|ENSG00000169641|Q86V48-3|LUZP1'] 108186 4931 TDVPSSSAPP True H1975_Epitope_Rep2 956.445090633 956.44398993586 24.05 2 -0.8605497266291223 0.2606632385647302 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ENST00000518820.1_1_8:143561046-143604069:+|nuORF'] 119680 10047 VESTLQTP True H1975_Epitope_Rep2 873.4443623570099 873.44326993586 43.637 2 -0.8605752690524701 0.2606632385647302 1.0 ['nc|ENSG00000106785|Q14142-4|TRIM14', 'nc|ENSG00000106785|Q14142-2|TRIM14', 'nc|ENSG00000106785|Q14142-3|TRIM14', 'ENSG00000106785|ENST00000341469|TRIM14'] 56790 7297 LEATNRYHMPK True NCI_RA007_Epitope_Rep1 1358.6765046335001 1358.6754099358602 32.375 2 -0.8606173643762941 0.2606632385647302 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 68626 13225 LVAERDIWSSA True PC9_epitope_Rep4 1245.63535101417 1245.6337049037902 58.765 3 -0.8606510783219818 0.2606632385647302 1.0 ['ENSG00000162779|ENST00000367618|AXDND1', 'nc|ENSG00000162779|Q5T1B0-2|AXDND1', 'ENST00000461179.2_1_1:179339175-179437601:+|nuORF'] 34315 7008 GPQLQKGKI True NCI_RA007_Epitope_Rep4 967.5814649665099 967.58036993586 33.583 2 -0.8606768242055939 0.2606632385647302 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 136683 12849 YIFDLFYKR True NCI_RA007_Epitope_Rep3 1263.6651945904698 1263.66355490379 57.796 3 -0.8607092766102993 0.2606632385647302 1.0 ['ENSG00000106245|ENST00000222969|BUD31', 'nc|ENSG00000106245|P41223-2|BUD31', 'ENST00000471813.1_1_7:99008715-99013888:+|nuORF', 'ENST00000466798.1_1_7:99013792-99015269:+|nuORF'] 40985 7511 HYCFLAAFCW True NCI_RA007_Epitope_Rep4 1259.52560696651 1259.52397490379 35.537 3 -0.8607195832827076 0.2606632385647302 1.0 ['nc|ENSG00000123146|P48960-2|ADGRE5', 'nc|ENSG00000123146|P48960-3|ADGRE5', 'ENSG00000123146|ENST00000242786|ADGRE5'] 63735 20099 LPRKKLKHIRQ True H1975_Epitope_Rep2 1415.9201209168698 1415.9184749037902 83.295 3 -0.8607422418352784 0.2606632385647302 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 54564 8503 LAATEHDTML True PC9_epitope_Rep2 1100.5172100274401 1100.5161099358602 38.072 2 -0.8607489477311958 0.2606632385647302 1.0 ['nc|ENSG00000029534|P16157-14|ANK1', 'nc|ENSG00000029534|P16157-10|ANK1', 'nc|ENSG00000029534|P16157-8|ANK1', 'IKBKB-ANK1|13|fusion', 'IKBKB-ANK1|12|fusion', 'nc|ENSG00000029534|P16157-5|ANK1', 'nc|ENSG00000029534|P16157-16|ANK1', 'IKBKB-ANK1|11|fusion', 'IKBKB-ANK1|14|fusion', 'ENSG00000029534|ENST00000289734|ANK1', 'nc|ENSG00000029534|P16157|ANK1', 'IKBKB-ANK1|3|fusion', 'IKBKB-ANK1|2|fusion', 'nc|ENSG00000029534|P16157-21|ANK1', 'nc|ENSG00000029534|P16157-12|ANK1', 'IKBKB-ANK1|1|fusion', 'IKBKB-ANK1|4|fusion', 'ENST00000524227.5_1_8:41525962-41555361:-|nuORF', 'IKBKB-ANK1|9|fusion', 'IKBKB-ANK1|6|fusion', 'IKBKB-ANK1|7|fusion', 'IKBKB-ANK1|8|fusion'] 88711 5370 RCRRFWSRWEQ True NCI_RA007_Epitope_Rep2 1608.7844323730399 1608.78221987172 25.506 4 -0.8607639666468097 0.2606632385647302 1.0 ['ENSG00000173714|ENST00000311378|WFIKKN2'] 64399 7680 LQQVEDLERR True H1975_Epitope_Rep2 1284.6786128084798 1284.6769649037901 34.493 3 -0.8607780465112951 0.2606632385647302 1.0 ['nc|ENSG00000226266|Q9UIF8-4|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-2|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-5|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-3|BAZ2B', 'ENSG00000123636|ENST00000392783|BAZ2B', 'ENST00000474437.1_1_2:160182413-160204074:-|nuORF'] 11009 131 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 0.72018 2 -0.8607983763181752 0.2606632385647302 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 139667 19179 YTSYPMHDFY True PC9_epitope_Rep1 1322.52777471114 1322.52613490379 78.567 3 -0.8608027944306188 0.2606632385647302 1.0 ['nc|ENSG00000138081|Q86XK2-6|FBXO11', 'ENSG00000138081|ENST00000403359|FBXO11', 'nc|ENSG00000138081|Q86XK2-5|FBXO11'] 136962 2770 YKKEEEEEESE True NCI_RA007_Epitope_Rep1 1427.59399926431 1427.59234490379 14.655 3 -0.8608096397695314 0.2606632385647302 1.0 ['ENST00000553920.5_1_14:23377568-23380602:-|nuORF'] 17028 9635 EGLTDVIRDVP True H1975_Epitope_Rep3 1212.6350166609998 1212.6339099358602 42.077 2 -0.8608293291197768 0.2606632385647302 1.0 ['ENSG00000155034|ENST00000382368|FBXL18'] 109055 9553 TFAQLKEE True PC9_epitope_Rep3 964.4865615221598 964.48546993586 41.696 2 -0.8608520777879737 0.2606632385647302 1.0 ['nc|ENSG00000167107|Q96CM8-3|ACSF2', 'ENSG00000167107|ENST00000300441|ACSF2', 'nc|ENSG00000167107|Q96CM8-2|ACSF2'] 79955 15446 PISLTHTGIH True PC9_epitope_Rep4 1074.5821932425 1074.58108993586 67.346 2 -0.8608639970177308 0.2606632385647302 1.0 ['ENST00000442218.2_1_12:48174732-48175212:+|nuORF'] 81287 5905 PPQGGNLSQGP True PC9_epitope_Rep3 1050.50942222506 1050.50832993586 27.775 2 -0.8608656773314027 0.2606632385647302 1.0 ['PRB3|p.Q109L|1|0.15|ENSG00000197870|chr12:11267923-11267923|T/A|missense_variant'] 3267 17245 AGFLFPAD True NCI_RA007_Epitope_Rep2 836.4068546494799 836.40630496793 71.815 1 -0.8609220320057902 0.2606632385647302 1.0 ['ENST00000506706.5_2_4:2471264-2471528:+|nuORF'] 93237 16509 RRRRRRRWRW True NCI_RA007_Epitope_Rep4 1638.9780787722198 1638.97642490379 71.565 3 -0.8609583105552822 0.2606632385647302 1.0 ['SLC4A2|p.Q100Rfs*145|1|0.3|ENSG00000164889|chr7:151064603-151064603|C/-|frameshift_variant'] 60535 17454 LIPLACYLV True H1975_Epitope_Rep1 1003.57762545603 1003.57707496793 72.622 1 -0.861021113332303 0.2606737116468822 1.0 ['ENSG00000111432|ENST00000229030|FZD10'] 81849 12684 PSHQVILEAL True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 54.096 2 -0.8610527474882068 0.2607119081006813 1.0 ['ASTL|p.R117H|1|0.18|ENSG00000188886|chr2:96133530-96133530|C/T|missense_variant'] 45257 8560 IRTAVRQQLQK True NCI_RA007_Epitope_Rep4 1339.8048163811102 1339.80370993586 39.712 2 -0.861062102445 0.2607119081006813 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'ENST00000583043.5_1_18:67684852-67806940:-|nuORF'] 64938 16919 LSCHCHSC True PC9_epitope_Rep5 888.3040635404002 888.30296993586 70.095 2 -0.8610808847444897 0.2607119081006813 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 121160 17752 VGGHCRGP True PC9_epitope_Rep5 781.3653412740099 781.36424993586 73.302 2 -0.8610814125267572 0.2607119081006813 1.0 ['ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 68365 11169 LTSLSEEQI True PC9_epitope_Rep2 1018.5182555732599 1018.51714993586 48.286 2 -0.8610870162997718 0.2607119081006813 1.0 ['KLHL32|p.R299Afs*16|1|0.2|ENSG00000186231|chr6:97114043-97114044|-/A|frameshift_variant', 'nc|ENSG00000186231|Q96NJ5-3|KLHL32', 'nc|ENSG00000186231|Q96NJ5-2|KLHL32', 'ENSG00000186231|ENST00000369261|KLHL32'] 33464 22120 GLGPLLLNL True PC9_epitope_Rep4 908.56950330048 908.56840993586 93.301 2 -0.8611237081984672 0.26072237960339945 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 82594 4999 PVIPQQPMMPV True PC9_epitope_Rep4 1235.64063671875 1235.63899490379 25.846 3 -0.8611394266695296 0.2607328508094786 1.0 ['ENSG00000125363|ENST00000380714|AMELX', 'nc|ENSG00000125363|Q99217-3|AMELX', 'nc|ENSG00000125363|Q99217-2|AMELX'] 125580 20361 VLYRVALAI True PC9_epitope_Rep4 1016.6382515666397 1016.63714993586 86.462 2 -0.8611451345613376 0.2607433217189315 1.0 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 40528 8911 HSPLLAAFTTQ True PC9_epitope_Rep2 1184.61897267404 1184.61733490379 39.634 3 -0.8612448440825912 0.2607679560358625 1.0 ['ENST00000454901.1_1_3:172143784-172143991:-|nuORF'] 64889 7395 LSASGRPVVDP True NCI_RA007_Epitope_Rep2 1096.58767254576 1096.58656993586 33.39 2 -0.8613158818027596 0.26079258965497704 1.0 ['ENST00000466352.5_3_1:2066409-2066779:+|nuORF'] 128156 24938 VRSKGRKF True NCI_RA007_Epitope_Rep5 976.5930327097199 976.5924849679301 103.42 1 -0.8613536197336104 0.26080305927342257 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 139027 6860 YSHRLEYFVFY True PC9_epitope_Rep3 1522.7245003717399 1522.72285490379 31.402 3 -0.8614897477482553 0.2608486290505325 1.0 ['ENST00000475263.1_1_10:96356750-96361376:+|nuORF'] 78397 7387 PAVRYWRRKT True PC9_epitope_Rep6 1331.7574722658696 1331.75581490379 37.626 3 -0.8614915227955132 0.2608486290505325 1.0 ['ENST00000488349.1_1_2:175260903-175262068:+|nuORF'] 133455 22622 WGKMPRRG True PC9_epitope_Rep1 986.5232388977398 986.5221499358599 91.825 2 -0.8615172559648248 0.2608486290505325 1.0 ['ENST00000427025.6_2_6:138893369-138893522:-|nuORF'] 85092 9795 QIQNENLLLRQ True PC9_epitope_Rep4 1367.75211210191 1367.75100993586 45.318 2 -0.8615316752548964 0.2608554029174338 1.0 ['ENST00000571006.5_1_16:46521999-46540142:-|nuORF', 'ENST00000566201.6_1_16:46508202-46534771:-|nuORF'] 25104 14994 FDLEKDLHII True NCI_RA007_Epitope_Rep1 1241.66558851329 1241.66448993586 62.388 2 -0.8615481082056506 0.2608554029174338 1.0 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 87173 5129 QSLEARAAPG True PC9_epitope_Rep1 998.5145076054998 998.51340993586 24.581 2 -0.8615958285516844 0.2608941949554602 1.0 ['ENST00000483681.5_2_3:58196572-58200114:-|nuORF'] 61446 12418 LLEWMIRWSNR True NCI_RA007_Epitope_Rep3 1502.7816384083796 1502.78054993586 56.059 2 -0.8616047312440585 0.26091882399592137 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 44412 7131 INFATLNP True H1975_Epitope_Rep3 888.4705175352 888.46942993586 32.401 2 -0.8617283081584167 0.26098593743361703 1.0 ['nc|ENSG00000186976|Q5THR3-3|EFCAB6', 'nc|ENSG00000186976|Q5THR3-5|EFCAB6', 'nc|ENSG00000186976|Q5THR3-2|EFCAB6', 'ENSG00000186976|ENST00000262726|EFCAB6'] 42321 11871 IEKWNRRDGEK True H1975_Epitope_Rep3 1429.7426100473697 1429.7415099358602 50.811 2 -0.8617569367810872 0.260992706931955 1.0 ['ENST00000342374.4_1_20:43127230-43127344:-|nuORF'] 83819 6054 QEETKTVL True PC9_epitope_Rep4 946.4971262058599 946.49602993586 30.281 2 -0.8617605438423385 0.260992706931955 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 22392 23078 ETETVFVP True PC9_epitope_Rep3 920.4491133842798 920.44800993586 94.038 2 -0.8617808320506336 0.26101733318228165 1.0 ['ENSG00000176986|ENST00000345254|SEC24C'] 23108 22894 EVLRKTKN True PC9_epitope_Rep1 986.58727862294 986.58618993586 92.859 2 -0.8618459868075327 0.26104195873514874 1.0 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000480158.1_1_10:69714333-69714887:-|nuORF'] 99284 19362 SLDFFHSDRKV True PC9_epitope_Rep2 1349.6727991520502 1349.67170993586 79.853 2 -0.8618955598841855 0.261066583590586 1.0 ['ENST00000590311.5_1_17:67108322-67108499:-|nuORF'] 125417 11535 VLTLTITT True H1975_Epitope_Rep1 860.5218844017201 860.52078993586 49.353 2 -0.8619799590700117 0.261077047253572 1.0 ['SLIT2|p.N183Tfs*60|1|0.21|ENSG00000145147|chr4:20486207-20486207|A/-|frameshift_variant'] 90683 24484 RKLLMLKKEKL True H1975_Epitope_Rep1 1398.9108616727797 1398.9097699358601 101.48 2 -0.8620278726220139 0.2610875106202209 1.0 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 85926 13062 QNTVEVAQFI True H1975_Epitope_Rep3 1147.5873381925899 1147.58624993586 55.484 2 -0.8620917307001174 0.26112873081497423 1.0 ['CON__Q29RQ1'] 65545 6570 LSGDLLDKDP True H1975_Epitope_Rep3 1071.54480467427 1071.54370993586 30.228 2 -0.8621249971153676 0.26112873081497423 1.0 ['ENSG00000196187|ENST00000366835|TMEM63A', 'TMEM63A|p.Q382Sfs*55|1|0.41|ENSG00000196187|chr1:225860939-225860939|G/-|frameshift_variant'] 72698 23061 MYLKYLRSVRL True PC9_epitope_Rep1 1440.82752597164 1440.82588490379 93.505 3 -0.8621369441625227 0.26112873081497423 1.0 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-2|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-1|CFAP47'] 106065 7164 SVLVRQISL True NCI_RA007_Epitope_Rep3 1013.62332977849 1013.62222993586 35.296 2 -0.8621439727281326 0.26112873081497423 1.0 ['nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400', 'nc|ENSG00000185684|Q6ZTU2-2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-6|EP400P1'] 43541 6733 IIDYIFYSKPQ True H1975_Epitope_Rep1 1385.72310338941 1385.7220099358601 30.939 2 -0.8621714805628437 0.26112873081497423 1.0 ['ENSG00000113300|ENST00000261951|CNOT6'] 41942 20681 IEAREKMADIY True H1975_Epitope_Rep2 1337.66493689029 1337.6638299358601 85.656 2 -0.8622034811163137 0.26112873081497423 1.0 ['ENSG00000123607|ENST00000243344|TTC21B'] 24984 11396 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 50.751 2 -0.8622054043331844 0.26112873081497423 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 24891 9218 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 39.858 2 -0.8622152899022808 0.26112873081497423 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 16844 10976 EFRERQKEQRK True H1975_Epitope_Rep1 1532.8171719699596 1532.81551490379 47.184 3 -0.8622265179966876 0.2611391921165527 1.0 ['nc|ENSG00000140368|O43586-2|PSTPIP1', 'ENSG00000140368|ENST00000558012|PSTPIP1'] 66117 10952 LSNVLELGWE True H1975_Epitope_Rep1 1158.5920892198599 1158.59098993586 47.092 2 -0.8622888825402203 0.26116381141158146 1.0 ['ENST00000462680.5_1_1:153955110-153955269:-|nuORF'] 107018 8490 SYLNIYSSQVR True NCI_RA007_Epitope_Rep1 1328.6724647988801 1328.6713699358602 37.024 2 -0.8623694201890268 0.26118843000948594 1.0 ['DSCAM|p.S472Y|1|0.57|ENSG00000171587|chr21:40339211-40339211|G/T|missense_variant'] 79140 10465 PGAPQQVMTQI True PC9_epitope_Rep2 1168.5910436740398 1168.58938490379 45.571 3 -0.8624031060422626 0.26119519204904224 1.0 ['ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 83996 11076 QEMKLFIHV True NCI_RA007_Epitope_Rep2 1143.61105084263 1143.6099499358602 47.672 2 -0.8624220251968024 0.26119519204904224 1.0 ['ENST00000536859.5_1_1:31883117-31883183:+|nuORF'] 59638 4144 LGSLQPRTHR True NCI_RA007_Epitope_Rep1 1163.65233849099 1163.65069490379 20.2 3 -0.8624360913288032 0.26119825584687695 1.0 ['ENST00000591384.5_1_17:76624040-76626354:-|nuORF'] 55148 13077 LANEKTTL True PC9_epitope_Rep5 888.4916469026 888.49054993586 55.307 2 -0.8624444958029116 0.26119825584687695 1.0 ['ENSG00000168631|ENST00000462446|MUCL3'] 121931 16769 VGPPSPFP True PC9_epitope_Rep3 796.41194002992 796.41084993586 69.648 2 -0.8624602604462366 0.26119825584687695 1.0 ['nc|ENSG00000142611|Q9HAZ2-2|PRDM16', 'nc|ENSG00000142611|Q9HAZ2-3|PRDM16', 'ENSG00000142611|ENST00000270722|PRDM16', 'ENST00000607632.1_1_1:2985775-3103053:+|nuORF', 'PRDM16|p.G651Afs*33|1|0.13|ENSG00000142611|chr1:3412145-3412145|G/-|frameshift_variant'] 42693 9876 IEWAKRESEK True NCI_RA007_Epitope_Rep1 1274.66190011518 1274.66080993586 42.418 2 -0.8625146824971951 0.26122593431483576 1.0 ['EPS15|p.R865K|1|0.13|ENSG00000085832|chr1:51356797-51356797|C/T|missense_variant'] 71406 13255 MIISIMEI True PC9_epitope_Rep3 948.5024119104401 948.50130993586 56.018 2 -0.8625275748834085 0.26122593431483576 1.0 ['ENSG00000198743|ENST00000381151|SLC5A3'] 134667 15371 WWNLRRTCFRI True H1975_Epitope_Rep1 1549.8088562157297 1549.80774993586 64.394 2 -0.8625398401713126 0.26122593431483576 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 30827 8581 GAPSRTYNR True PC9_epitope_Rep6 1020.5100909314 1020.50898993586 42.796 2 -0.8625949284065219 0.26122593431483576 1.0 ['ENSG00000114023|ENST00000477892|FAM162A'] 77150 10669 NYDYIWDFVLY True H1975_Epitope_Rep2 1509.6816325002499 1509.68052993586 46.064 2 -0.8626434902704192 0.26124685031567624 1.0 ['nc|ENSG00000131480|O75106-2|AOC2', 'ENSG00000131480|ENST00000253799|AOC2'] 107522 17704 TAAYEQLK True PC9_epitope_Rep3 922.47599683846 922.47488993586 73.295 2 -0.8626702773614174 0.26124685031567624 1.0 ['ENST00000463347.5_1_3:45730948-45748420:+|nuORF', 'ENST00000445499.2_1_3:45730957-45754662:+|nuORF', 'ENST00000463237.5_1_3:45730948-45754703:+|nuORF', 'ENSG00000211456|ENST00000389061|SACM1L'] 128513 12017 VSGGFFGIR True PC9_epitope_Rep2 938.4974009893799 938.49630993586 51.54 2 -0.8627295312610143 0.261257307871976 1.0 ['ENSG00000214717|ENST00000652001|ZBED1'] 121899 7229 VGPHELVG True NCI_RA007_Epitope_Rep5 806.4286527232199 806.42754993586 34.483 2 -0.8627498985918483 0.26126342906481337 1.0 ['ENST00000352251.7_2_13:39611887-39612184:-|nuORF'] 128883 15287 VSTAEKLL True PC9_epitope_Rep5 859.5014833103098 859.50038993586 63.811 2 -0.8627691541051544 0.26126342906481337 1.0 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'nc|ENSG00000168026|Q8NDW8-6|TTC21A', 'nc|ENSG00000168026|Q8NDW8-3|TTC21A'] 88648 11208 RARWQHTL True PC9_epitope_Rep1 1066.57844527474 1066.5773499358602 47.993 2 -0.8628025063205467 0.26126342906481337 1.0 ['ENST00000461203.5_1_5:131746692-131785425:+|nuORF'] 83538 8768 QDLPPKPDLEW True H1975_Epitope_Rep1 1336.6663167892798 1336.66520993586 38.656 2 -0.8628153456961729 0.26126342906481337 1.0 ['ENST00000373381.8_2_1:33999406-34006153:-|nuORF'] 95809 16600 SDFLPRRSRVH True H1975_Epitope_Rep1 1368.7374650972802 1368.73636993586 69.229 2 -0.8628221294209377 0.26126342906481337 1.0 ['ENST00000536837.1_1_12:121837446-121837686:-|nuORF'] 120069 8291 VFFWWRRG True NCI_RA007_Epitope_Rep5 1152.5981180901597 1152.59647490379 38.568 3 -0.8628290395185723 0.26126342906481337 1.0 ['SVA_D_dup775|chrX:71340697-71342586:-|1.2848477161067438|0.0874932661462981|3.88|488.0|20|2|sense', 'SVA_D_dup517|chr6:34785776-34787536:+|1.8458154546262728|0.1042097672883524|4.15|465.0|33|3|sense', 'SVA_D_dup1293|chr19:38797148-38798824:-|6.990441010193571|0.2829324247822702|4.63|492.0|27|3|sense', 'SVA_C_dup26|chr1:153574460-153575981:+|1.9575035595213544|0.0744788955417672|4.72|476.0|2|1|sense', 'SVA_C_dup119|chr4:183818089-183819596:-|1.7262149826194688|0.0479649960045823|5.17|467.0|28|3|sense', 'chr2:38750194-38756111|161|81.32|0.09|9.86|-|1|TE_info:SVA_D,SVA_D_dup166,SVA,Retroposon,donor,-,38756111,38756756|SRSF7,None|2'] 139648 6737 YTSETYLMKHM True NCI_RA007_Epitope_Rep1 1402.6261088534202 1402.6250099358601 30.215 2 -0.8629653840555571 0.2613446567586695 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENSG00000160094|ENST00000539719|ZNF362'] 3760 19238 AGTLTVGDLV True PC9_epitope_Rep4 944.5178616504398 944.51731496793 82.099 1 -0.8629915428192554 0.2613655664383174 1.0 ['nc|ENSG00000131269|O75027-3|ABCB7', 'ENSG00000131269|ENST00000373394|ABCB7', 'nc|ENSG00000131269|O75027-2|ABCB7', 'ENST00000469368.1_1_X:74289115-74291374:-|nuORF'] 28233 4410 FRSATTSGAPG True NCI_RA007_Epitope_Rep5 1050.50942222506 1050.50832993586 23.593 2 -0.8629964730240445 0.2613655664383174 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 74524 12369 NKVEKYLEQ True NCI_RA007_Epitope_Rep1 1149.6029882567298 1149.60188993586 52.086 2 -0.863021369320266 0.26136797860145206 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant', 'ZDBF2|p.I1094Nfs*14|1|0.39|ENSG00000204186|chr2:206307801-206307802|-/A|frameshift_variant'] 64675 9969 LRKKNQAL True PC9_epitope_Rep4 969.6083484206898 969.60724993586 46.005 2 -0.8630273398683557 0.26136797860145206 1.0 ['ENST00000558912.1_1_15:40631451-40632237:-|nuORF', 'CCDC9B|p.Q314Kfs*21|1|0.26|ENSG00000188549|chr15:40336654-40336654|C/-|frameshift_variant', 'ENSG00000188549|ENST00000397536|CCDC9B', 'nc|ENSG00000188549|Q6ZUT6|CCDC9B'] 44730 14116 IPQREKTV True PC9_epitope_Rep3 969.5607295219299 969.55962993586 59.382 2 -0.8630276590282594 0.26136797860145206 1.0 ['ENST00000475200.5_1_10:103113883-103221786:+|nuORF'] 61016 12816 LLAPHHLL True H1975_Epitope_Rep2 912.5545219426801 912.55342993586 54.405 2 -0.8630698477893611 0.26136797860145206 1.0 ['LTR1_dup85|chr7:101629186-101629993:-|1.961039395768969|0.0003248618387484|12.56|495.0|10|2|sense'] 80442 19546 PLKLILLPVLL True H1975_Epitope_Rep3 1230.8679171483 1230.8662649037901 81.899 3 -0.8630766709778468 0.26136797860145206 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 119456 7943 VEPSDLQIPP True H1975_Epitope_Rep3 1093.5655401188499 1093.56444993586 35.523 2 -0.863077321026691 0.26136797860145206 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 83440 6633 QDANENKTV True PC9_epitope_Rep3 1017.47270236317 1017.47160993586 30.537 2 -0.8630887308365203 0.26136797860145206 1.0 ['CON__Q28107'] 11119 6602 DEEEFFEIRTE True NCI_RA007_Epitope_Rep1 1442.6201544424996 1442.6190499358602 29.694 2 -0.863114360207962 0.26137843192754034 1.0 ['ENSG00000168994|ENST00000380283|PXDC1', 'ENST00000485986.1_1_6:3739369-3751753:-|nuORF', 'ENST00000477592.2_1_6:3737425-3751765:-|nuORF'] 55615 19659 LCTRAVRTRLF True PC9_epitope_Rep2 1334.76050904098 1334.75887490379 81.003 3 -0.8631535433318137 0.26139933769211177 1.0 ['ENSG00000180758|ENST00000377411|GPR157'] 48420 7756 KEDQTEYLEER True NCI_RA007_Epitope_Rep1 1438.65760258038 1438.6565099358602 34.16 2 -0.8631613101288501 0.26139933769211177 1.0 ['ENSG00000080824|ENST00000216281|HSP90AA1', 'nc|ENSG00000080824|P07900-2|HSP90AA1', 'ENST00000554401.1_1_14:102549349-102551760:-|nuORF', 'ENST00000505987.1_1_4:88813329-88813827:+|nuORF', 'ENSG00000096384|ENST00000371646|HSP90AB1', 'nc|ENSG00000183199|Q58FF7|HSP90AB3P', 'nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 64951 9280 LSCLVFLR True PC9_epitope_Rep5 949.54190865365 949.54080993586 40.644 2 -0.86324658410632 0.2614165428429916 1.0 ['ENST00000445355.7_1_10:135075987-135076521:-|nuORF'] 55898 14717 LDGKEVSVF True PC9_epitope_Rep5 992.5178616504398 992.51731496793 61.608 1 -0.8632906988026325 0.2614165428429916 1.0 ['nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2'] 88087 25326 QVVLQVAAAT True PC9_epitope_Rep2 998.5760452328999 998.57494993586 103.09 2 -0.8633108310357136 0.2614165428429916 1.0 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000104885|ENST00000398665|DOT1L'] 102940 19480 SQILKHPSL True PC9_epitope_Rep1 1021.59202965021 1021.59092993586 79.747 2 -0.8636239009468315 0.2615082004330168 1.0 ['ENSG00000116221|ENST00000360840|MRPL37', 'ENST00000490670.1_1_1:54670749-54673061:+|nuORF'] 56144 9631 LDMWLSSVTVP True NCI_RA007_Epitope_Rep1 1246.62676047642 1246.62566993586 41.462 2 -0.8636483127669196 0.2615082004330168 1.0 ['ENSG00000255582|ENST00000542433|OR10G2'] 82754 12908 PVQPAELL True PC9_epitope_Rep6 865.49091862661 865.48982993586 61.183 2 -0.8637561204981707 0.2615328012679006 1.0 ['ENSG00000168255|ENST00000513506|POLR2J3'] 11008 7 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 0.030871 2 -0.863788673530215 0.2615678505730862 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 122502 18340 VGSRRVVQ True NCI_RA007_Epitope_Rep4 899.5300980999898 899.5295449679301 79.345 1 -0.8638003309322703 0.2615678505730862 1.0 ['ENSG00000170482|ENST00000348729|SLC23A1', 'nc|ENSG00000170482|Q9UHI7-2|SLC23A1'] 34209 9192 GPIQSAKL True PC9_epitope_Rep5 812.4756029156399 812.4745099358599 40.301 2 -0.8638676896286142 0.26160659959530785 1.0 ['ENST00000566515.5_1_15:43486293-43487036:+|nuORF'] 56283 15972 LDQNISHQQAI True NCI_RA007_Epitope_Rep3 1265.6364136433301 1265.63530993586 70.498 2 -0.8639170971843398 0.2616342412451362 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'PATJ|p.P937Rfs*9|2|0.25|ENSG00000132849|chr1:61864607-61864607|C/-|frameshift_variant'] 133997 4255 WPQRFYHHCPV True NCI_RA007_Epitope_Rep1 1468.68225872028 1468.68116993586 20.665 2 -0.8639230225656858 0.2616342412451362 1.0 ['ENST00000583268.1_1_17:38412646-38433335:+|nuORF'] 130535 19698 VTWVAMTTQ True PC9_epitope_Rep1 1035.50591706775 1035.50480993586 80.594 2 -0.8639327391357523 0.2616342412451362 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.T492Nfs*14|1|0.09|ENSG00000155897|chr8:130937079-130937080|-/T|frameshift_variant', 'ADCY8|p.G246V|1|0.2|ENSG00000155897|chr8:131039597-131039597|C/A|missense_variant'] 134163 12311 WRKLDLWRFHV True NCI_RA007_Epitope_Rep2 1554.85718630714 1554.8560899358602 52.49 2 -0.8639576832944563 0.2616342412451362 1.0 ['OXGR1|p.S67Kfs*41|1|0.41|ENSG00000165621|chr13:96987560-96987561|-/T|frameshift_variant'] 12150 16530 DIKELIPEFYY True PC9_epitope_Rep2 1428.7176836557999 1428.7160249037902 68.822 3 -0.8640780762273382 0.2616446884373762 1.0 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'ENST00000503716.5_1_4:151186876-151502511:-|nuORF', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 84464 15488 QGLLDNAKHL True PC9_epitope_Rep1 1107.60365696307 1107.60254993586 64.397 2 -0.8641183770618934 0.26165143326070345 1.0 ['ENST00000336824.8_1_3:172064117-172064219:+|nuORF'] 80669 12721 PLPPVPASP True PC9_epitope_Rep2 873.4960040070499 873.49490993586 54.237 2 -0.8641345398338187 0.26165143326070345 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 62280 12898 LLQLIHLP True H1975_Epitope_Rep2 945.60113778193 945.6000499358599 54.724 2 -0.8641756232133065 0.26165447574312756 1.0 ['nc|ENSG00000166153|Q8N2C3|DEPDC4', 'ENSG00000166153|ENST00000550587|DEPDC4'] 78567 4918 PDQFYRLWL True NCI_RA007_Epitope_Rep2 1236.6291434349198 1236.6274949037902 23.75 3 -0.8642217900444132 0.26165447574312756 1.0 ['ENSG00000007384|ENST00000262316|RHBDF1', 'ENST00000486045.1_1_16:109134-109779:-|nuORF', 'ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000590168.5_1_17:74469085-74473795:-|nuORF'] 27489 6948 FPCYAHVKASF True NCI_RA007_Epitope_Rep3 1268.60121443492 1268.60010993586 34.435 2 -0.8642342137226178 0.26165447574312756 1.0 ['ART3-SLC25A13|1|fusion', 'ENSG00000004864|ENST00000265631|SLC25A13', 'nc|ENSG00000004864|Q9UJS0-2|SLC25A13'] 77692 8275 PAAASRCLL True PC9_epitope_Rep1 900.48512205352 900.48402993586 36.663 2 -0.8642752021582832 0.26167536748581693 1.0 ['ENST00000370551.8_1_1:87380332-87380500:+|nuORF'] 90519 7120 RKDRHLGK True NCI_RA007_Epitope_Rep5 1008.5940953388798 1008.59298993586 34.066 2 -0.8642775442284931 0.26167536748581693 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 24577 20694 FALSGPLFL True H1975_Epitope_Rep2 963.5429541994699 963.5424049679301 85.706 1 -0.8643257829272514 0.26168211077314846 1.0 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 70065 19976 LYHFLLCLF True PC9_epitope_Rep3 1167.6150735939098 1167.61396993586 82.083 2 -0.8643562937979444 0.26168211077314846 1.0 ['chr5:90929313-90965415|333|22.99|0.23|6.64|+|1|TE_info:L1PA2,L1PA2_dup1646,L1,LINE,donor,-,90923631,90929313|None,ADGRV1|54', 'L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|347|3|anti-sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|257|2|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|249|2|anti-sense', 'chr6:83315413-83334213|140|10.1|0.0|19.95|-|2|TE_info:L1HS,L1HS_dup688,L1,LINE,donor,+,83334213,83339981|ME1,None|71', 'chr6:45020632-45062708|281|10.85|0.01|10.56|-|1|TE_info:L1PA2,L1PA2_dup1868,L1,LINE,donor,+,45062708,45068476|SUPT3H,None|63', 'chr14:58012150-58032884|335|10.01|0.03|8.51|-|0|TE_info:L1PA2,L1PA2_dup4307,L1,LINE,donor,+,58032884,58038561|ARMH4,None|47', 'chr3:118905718-118914503|368|14.39|0.0|11.97|-|1|TE_info:L1PA2,L1PA2_dup926,L1,LINE,donor,+,118914503,118920271|IGSF11,None|27'] 122158 13257 VGRKIFPP True PC9_epitope_Rep2 912.5545219426798 912.55342993586 56.268 2 -0.8644078478469741 0.261703000551728 1.0 ['ENST00000550043.1_1_14:28733783-28734191:+|nuORF'] 1996 14708 AEKLPEAK True PC9_epitope_Rep3 884.4967322830399 884.49562993586 61.715 2 -0.8644229778431809 0.261703000551728 1.0 ['PTPRC|p.P1268A|1|0.3|ENSG00000081237|chr1:198756062-198756062|C/G|missense_variant'] 55350 15032 LASINSTV True PC9_epitope_Rep5 803.43888305375 803.43778993586 62.825 2 -0.8644360693419957 0.2617097426756638 1.0 ['ENSG00000167986|ENST00000301764|DDB1', 'nc|ENSG00000167986|Q16531-2|DDB1'] 84166 14234 QERRPSRPAP True NCI_RA007_Epitope_Rep1 1192.6425020832799 1192.64140993586 59.406 2 -0.8644809047066878 0.2617097426756638 1.0 ['ENST00000306065.8_1_19:33096822-33106669:-|nuORF'] 13408 20076 DNLFFLQGF True PC9_epitope_Rep5 1099.5338460677497 1099.53274993586 82.275 2 -0.8644927531252772 0.26172018673079644 1.0 ['ENSG00000198837|ENST00000361217|DENND4B'] 78352 20496 PATLVEPIA True PC9_epitope_Rep5 909.5171333744499 909.51602993586 83.877 2 -0.8645158941973253 0.26172692808238557 1.0 ['ENST00000543026.5_1_12:31240692-31242187:+|nuORF', 'ENST00000542242.1_1_12:31240692-31242486:+|nuORF'] 3483 15633 AGLPSWQYQC True PC9_epitope_Rep6 1151.50697969691 1151.50588993586 72.334 2 -0.8645250756794683 0.26172692808238557 1.0 ['nc|ENSG00000179994|Q495Y7|SPDYE7P'] 64919 16472 LSCHCHSC True PC9_epitope_Rep2 888.3040635404002 888.30296993586 68.602 2 -0.8646808011639885 0.2617969899287088 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 79457 7550 PGPLSKQGS True PC9_epitope_Rep4 869.46068112749 869.46013496793 36.413 1 -0.8646992706100042 0.2617969899287088 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 130733 5434 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep2 1029.44371111445 1029.4426099358602 26.293 2 -0.8647002599116 0.2617969899287088 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 28916 12442 FTEEYQKSLLE True H1975_Epitope_Rep1 1385.6714617393698 1385.6703699358602 52.895 2 -0.8647204832135575 0.2617969899287088 1.0 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 45194 12685 IRHFMELV True PC9_epitope_Rep5 1043.5586213469498 1043.55807496793 53.799 1 -0.8648092307256314 0.2618074317156315 1.0 ['ENST00000498078.1_1_13:41303510-41323454:-|nuORF', 'ENSG00000102738|ENST00000323563|MRPS31'] 128959 8962 VSVNERLVYT True H1975_Epitope_Rep1 1178.6295373577398 1178.62844993586 39.376 2 -0.8648247263466009 0.26182461103253185 1.0 ['nc|ENSG00000141391|Q96N28-2|PRELID3A', 'ENSG00000141391|ENST00000440960|PRELID3A'] 62973 10821 LNEISEETTIQ True PC9_epitope_Rep2 1275.61942616651 1275.6183299358602 46.942 2 -0.8648406935276256 0.26182461103253185 1.0 ['ENSG00000164118|ENST00000503780|CEP44'] 61560 15382 LLGLKKLSFYY True NCI_RA007_Epitope_Rep3 1343.78530972315 1343.7842099358602 68.064 2 -0.8648526601668319 0.26182461103253185 1.0 ['ENSG00000175899|ENST00000318602|A2M', 'ENST00000472360.1_1_12:9251139-9254147:-|nuORF'] 11110 4715 DEDYEEVVEYY True NCI_RA007_Epitope_Rep2 1451.56163650687 1451.5605299358601 22.968 2 -0.8648696097931492 0.26183134847670503 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant', 'NEB|p.K783Sfs*21|1|0.29|ENSG00000183091|chr2:151688359-151688359|T/-|frameshift_variant'] 82727 16504 PVPTLWNEPAE True H1975_Epitope_Rep3 1251.6135529404298 1251.6129749679299 68.98 1 -0.8648728803518269 0.26183134847670503 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 90277 21681 RHRRRRKQRP True PC9_epitope_Rep3 1444.8824470518798 1444.88134993586 88.694 2 -0.864900221837338 0.2618343822926243 1.0 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000572285.5_1_17:7132813-7133230:-|nuORF', 'ENST00000574642.5_1_17:7132550-7133686:-|nuORF'] 24965 11348 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 51.751 2 -0.8649003790624606 0.2618343822926243 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 84238 7585 QEVETDWGLLK True NCI_RA007_Epitope_Rep2 1316.66123140884 1316.6601299358601 34.127 2 -0.8649085065780752 0.2618343822926243 1.0 ['ENSG00000077274|ENST00000324068|CAPN6'] 127730 21069 VRITFVRK True PC9_epitope_Rep2 1017.6447339294099 1017.64362993586 86.498 2 -0.8649201581747907 0.26184482222159366 1.0 ['ENST00000509182.1_1_5:61688751-61699599:-|nuORF', 'ENSG00000086189|ENST00000199320|DIMT1'] 75189 8503 NNPSIPAG True PC9_epitope_Rep5 768.37661715036 768.37606496793 37.648 1 -0.8650045032835396 0.26185526185526187 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'RREB1|p.A584Gfs*8|1|0.14|ENSG00000124782|chr6:7229846-7229847|-/G|frameshift_variant', 'nc|ENSG00000124782|Q92766-6|RREB1'] 27295 12131 FLYRMRDYMPP True NCI_RA007_Epitope_Rep2 1487.7053622336298 1487.70426993586 51.781 2 -0.8651086575755368 0.2618828753659261 1.0 ['ENSG00000188676|ENST00000502986|IDO2'] 134891 23312 YADGPHQFWT True NCI_RA007_Epitope_Rep3 1220.5250722892001 1220.5239699358601 101.25 2 -0.8651589144483804 0.2618828753659261 1.0 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000466794.5_1_19:12767171-12772081:-|nuORF'] 78926 8919 PFEIVWGMRRP True NCI_RA007_Epitope_Rep5 1386.7230609030998 1386.7219699358602 40.969 2 -0.8651719068468954 0.2618828753659261 1.0 ['ENST00000488457.1_1_2:25600201-25602432:-|nuORF'] 16625 13816 EESKEPVADE True NCI_RA007_Epitope_Rep1 1131.4931630242297 1131.4925749679298 57.758 1 -0.8651746066697353 0.2618828753659261 1.0 ['ENSG00000074201|ENST00000525428|CLNS1A'] 85221 4323 QKKHHHHHHQQ True PC9_epitope_Rep1 1480.7296943782403 1480.72804490379 21.514 3 -0.8652828092725466 0.26193573933702907 1.0 ['ENSG00000141867|ENST00000679869|BRD4'] 100338 9321 SLMLELSP True NCI_RA007_Epitope_Rep1 888.4626552734401 888.46154993586 40.251 2 -0.8652976875950905 0.26193876829526974 1.0 ['ENST00000358597.7_2_11:47490324-47493758:-|nuORF', 'ENST00000395290.6_1_11:47490324-47490525:-|nuORF'] 36016 15026 GVDFEGTF True PC9_epitope_Rep4 870.37594844402 870.37484993586 65.733 2 -0.8652981037628815 0.26193876829526974 1.0 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 66226 9366 LSPSQDVK True H1975_Epitope_Rep1 872.46034677432 872.45924993586 40.934 2 -0.865311222342366 0.26193876829526974 1.0 ['nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1', 'ENSG00000108175|ENST00000334512|ZMIZ1', 'ZMIZ1|p.D570Wfs*35|1|0.51|ENSG00000108175|chr10:79299089-79299090|GG/-|frameshift_variant'] 133181 7559 WDRWLCKNRQR True NCI_RA007_Epitope_Rep2 1559.7891834003099 1559.7875249037902 34.028 3 -0.8653354155138046 0.2619492052717914 1.0 ['ENST00000491103.5_1_6:10748006-10756744:+|nuORF'] 61066 4986 LLAVSHVG True H1975_Epitope_Rep3 794.46503823194 794.46394993586 24.308 2 -0.8655010081829916 0.26204448718130013 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 4492 21553 AKKIKRPKFTV True NCI_RA007_Epitope_Rep5 1314.8499756683798 1314.84832490379 89.99 3 -0.8655465790595424 0.262054922367714 1.0 ['nc|ENSG00000205221|Q6UXI7-2|VIT', 'nc|ENSG00000205221|Q6UXI7-5|VIT', 'nc|ENSG00000205221|Q6UXI7|VIT', 'ENSG00000205221|ENST00000379242|VIT', 'nc|ENSG00000205221|Q6UXI7-3|VIT'] 59249 8577 LGGNVTRPWW True H1975_Epitope_Rep3 1184.60907669668 1184.6079699358602 37.982 2 -0.8656168849762793 0.26207949773045436 1.0 ['ENST00000595750.1_3_19:42811211-42813854:+|nuORF', 'ENST00000499536.2_1_19:42813698-42813854:+|nuORF'] 140052 27919 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 117.67 3 -0.8657093987376183 0.26210407239819006 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 90118 10458 RGRRPERNYQH True NCI_RA007_Epitope_Rep1 1467.75557477291 1467.75446993586 44.662 2 -0.8657320882279932 0.26211450629940186 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'ENST00000471538.1_1_1:16200459-16203174:+|nuORF'] 81862 12528 PSKEHPYDAAK True H1975_Epitope_Rep3 1241.6040508858903 1241.6029499358601 53.386 2 -0.8657749477364588 0.2621212335449571 1.0 ['ENSG00000128524|ENST00000249289|ATP6V1F', 'nc|ENSG00000128524|Q16864-2|ATP6V1F'] 69752 17366 LWKQWRESL True PC9_epitope_Rep5 1244.6665915727997 1244.66494490379 71.798 3 -0.8657885435690675 0.2621212335449571 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 42531 7794 IERYKKDL True PC9_epitope_Rep4 1063.6025943339098 1063.6014899358602 37.379 2 -0.8658412666206302 0.2621740851761778 1.0 ['nc|ENSG00000160404|Q8N2E6|TOR2A', 'nc|ENSG00000160404|Q5JU69-2|TOR2A', 'ENSG00000160404|ENST00000373284|TOR2A'] 18977 5545 ELFSDQTIRK True NCI_RA007_Epitope_Rep2 1235.6510010783097 1235.64990993586 26.185 2 -0.865972138418654 0.2622090885954246 1.0 ['ENST00000492955.1_1_2:160758938-160759124:-|nuORF'] 116310 8028 TVWAPRLP True NCI_RA007_Epitope_Rep5 938.5337864980999 938.53268993586 37.571 2 -0.8660093458741424 0.2622090885954246 1.0 ['nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-3|TMEM132B'] 30352 3371 GAEIKELSAK True NCI_RA007_Epitope_Rep2 1044.5815245361598 1044.5804299358601 17.772 2 -0.8660613371044378 0.2622121053598948 1.0 ['nc|ENSG00000290720|Q5EBM4-2|ZNF542P', 'nc|ENSG00000290720|Q5EBM4|ZNF542P', 'ENST00000468396.5_1_19:56884531-56888546:+|nuORF', 'ENST00000467807.5_1_19:56884531-56888546:+|nuORF'] 86128 3813 QPRDYSGENP True NCI_RA007_Epitope_Rep2 1161.50506512061 1161.5034149037901 19.465 3 -0.8660658675641967 0.2622121053598948 1.0 ['ENSG00000204920|ENST00000270014|ZNF155', 'nc|ENSG00000204920|Q12901-2|ZNF155'] 138751 15221 YSCAREGEPD True H1975_Epitope_Rep1 1125.4396879827298 1125.4385899358601 63.811 2 -0.8660693465069599 0.2622121053598948 1.0 ['nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF'] 42340 8396 IELLHNIDP True H1975_Epitope_Rep1 1062.5709598524602 1062.5698699358602 37.223 2 -0.8661251296137454 0.2622329671572578 1.0 ['nc|ENSG00000113273|P15848-2|ARSB', 'ENSG00000113273|ENST00000264914|ARSB'] 24802 21106 FCIQHHTFY True H1975_Epitope_Rep2 1194.52804949466 1194.52694993586 87.362 2 -0.866187939238131 0.2622329671572578 1.0 ['nc|ENSG00000224960|Q6ZMV5-2|PPP4R3C', 'ENSG00000224960|ENST00000412172|PPP4R3C'] 121596 21459 VGLAVFLIYKF True PC9_epitope_Rep2 1268.7532813188798 1268.75218993586 88.015 2 -0.8662430191651963 0.26227468721283664 1.0 ['ENSG00000156395|ENST00000369701|SORCS3'] 121781 11180 VGMKLWVE True NCI_RA007_Epitope_Rep4 960.5102741721998 960.50916993586 49.887 2 -0.8662440996823547 0.26227468721283664 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 137986 16258 YQAGSLCLA True H1975_Epitope_Rep3 924.43750315476 924.43640993586 67.993 2 -0.8662472065546335 0.26227468721283664 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.G3456Afs*3|1|0.25|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant', 'FRAS1|p.G3729Afs*31|1|0.1|ENSG00000138759|chr4:78537086-78537086|G/-|frameshift_variant', 'nc|ENSG00000138759|Q86XX4-5|FRAS1', 'nc|ENSG00000138759|Q86XX4-4|FRAS1', 'nc|ENSG00000138759|Q86XX4-6|FRAS1'] 95145 7455 SAAAARTRLL True PC9_epitope_Rep4 1028.60907669668 1028.6079699358602 36.03 2 -0.8662526193604877 0.26227468721283664 1.0 ['nc|ENSG00000204682|Q5T4H9|MIR1915HG'] 40548 18776 HSRRIFKRKRC True NCI_RA007_Epitope_Rep4 1485.8575377436496 1485.85588490379 81.234 3 -0.8662588333682556 0.262277700811445 1.0 ['ENST00000539109.1_1_12:67664295-67664358:+|nuORF'] 126743 19008 VPSDRLALL True PC9_epitope_Rep2 982.58113061334 982.58002993586 78.479 2 -0.8662591102937454 0.262277700811445 1.0 ['ENST00000439220.6_1_15:75074475-75090608:+|nuORF', 'ENST00000569462.5_1_15:75075012-75090608:+|nuORF'] 130220 4406 VTSGTSTVVC True NCI_RA007_Epitope_Rep1 952.45354714172 952.45244993586 21.252 2 -0.8662635711067842 0.262277700811445 1.0 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4'] 29360 2731 FVEEWRKFVRK True NCI_RA007_Epitope_Rep2 1522.8408675366597 1522.83865987172 14.85 4 -0.8663332292039537 0.2623231223759913 1.0 ['ENSG00000090686|ENST00000308271|USP48', 'nc|ENSG00000090686|Q86UV5-8|USP48', 'nc|ENSG00000090686|Q86UV5-2|USP48', 'nc|ENSG00000090686|Q86UV5-5|USP48'] 122323 10791 VGRVKCYKYW True NCI_RA007_Epitope_Rep5 1300.6750480815197 1300.67394993586 48.142 2 -0.8663723626465262 0.2623231223759913 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 82732 17187 PVPTLWNEPAE True NCI_RA007_Epitope_Rep2 1251.6135529404298 1251.6129749679299 71.593 1 -0.866374339668003 0.2623231223759913 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 554 10946 AAQWAAPQ True PC9_epitope_Rep1 841.4082516318099 841.40714993586 46.992 2 -0.8664082323757841 0.26232473993668026 1.0 ['ENST00000356864.3_1_8:22960127-22960358:+|nuORF'] 14765 6076 DVYKNWWYWYC True H1975_Epitope_Rep1 1624.6809213075999 1624.6792649037902 28.438 3 -0.8664743557002692 0.26232473993668026 1.0 ['ENST00000359165.5_1_12:19609713-19609968:-|nuORF'] 93234 20731 RRRRRRRRRRK True PC9_epitope_Rep3 1707.1166379336998 1707.1150049037901 85.01 3 -0.8664776452148512 0.26232473993668026 1.0 ['ENSG00000229674|ENST00000448797|H2AL3'] 66753 9455 LSTVLLKKEED True NCI_RA007_Epitope_Rep1 1273.7129326285299 1273.7118299358601 40.772 2 -0.8665117992866265 0.26232473993668026 1.0 ['ENSG00000205413|ENST00000379958|SAMD9'] 105982 17439 SVLKALTVP True PC9_epitope_Rep2 926.58006798418 926.57896993586 72.332 2 -0.8665289007735698 0.26232473993668026 1.0 ['NAXE|p.G209A|1|0.2|ENSG00000163382|chr1:156593517-156593517|G/C|missense_variant'] 62938 19949 LNDAYDLV True PC9_epitope_Rep3 921.4443623570099 921.44326993586 81.977 2 -0.8665471613408579 0.26232473993668026 1.0 ['ENSG00000130829|ENST00000342782|DUSP9'] 30963 17955 GASTPQPLLLH True PC9_epitope_Rep4 1132.62405805448 1132.62296993586 77.118 2 -0.8665592962499142 0.26232473993668026 1.0 ['nc|ENSG00000265992|Q1W209|ESRG'] 60736 23716 LKARGGGG True NCI_RA007_Epitope_Rep3 714.4136713654199 714.41312496793 102.81 1 -0.8665920015719939 0.26232473993668026 1.0 ['ENST00000378119.8_1_6:24719560-24720079:-|nuORF', 'ENST00000308020.5_1_11:490627-491155:+|nuORF'] 14022 10781 DSAALDPLQA True H1975_Epitope_Rep2 999.4872897981498 999.48677496793 46.5 1 -0.8666232508422476 0.26232473993668026 1.0 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'TCF12|p.S223Tfs*22|1|0.16|ENSG00000140262|chr15:57231240-57231240|G/-|frameshift_variant'] 65738 19415 LSICCWASP True PC9_epitope_Rep2 978.4303095993399 978.42920993586 80.058 2 -0.8666422337561123 0.26232473993668026 1.0 ['ENST00000324379.9_1_1:40219137-40219350:+|nuORF'] 754 14930 AAVRRPRS True NCI_RA007_Epitope_Rep3 911.54133149003 911.54022993586 66.169 2 -0.8666528584358253 0.26232473993668026 1.0 ['ENST00000330871.3_1_17:76355142-76356149:-|nuORF'] 27396 10960 FNDGNAAVV True PC9_epitope_Rep3 905.4242956187699 905.42374496793 47.14 1 -0.8666899613354048 0.2623314582921107 1.0 ['nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 118743 9622 VEDKYWRFDEK True H1975_Epitope_Rep1 1513.7201432672898 1513.71904993586 41.938 2 -0.8667005072801061 0.2623314582921107 1.0 ['ENSG00000149968|ENST00000299855|MMP3'] 48213 8733 KCIKGDQCK True H1975_Epitope_Rep1 1021.5048715219299 1021.50376993586 38.52 2 -0.8667318558744668 0.2623418839657975 1.0 ['ENSG00000144161|ENST00000409573|ZC3H8'] 92056 21989 RPRTLLIE True H1975_Epitope_Rep1 996.6080140675199 996.60690993586 91.464 2 -0.8667807629464751 0.2623805754988976 1.0 ['nc|ENSG00000203666|Q5VUJ9|EFCAB2'] 74377 24645 NISVPGLQ True PC9_epitope_Rep4 826.45486747106 826.45376993586 103.29 2 -0.8668019727121749 0.2623910001837274 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'LATS1|p.G535Efs*6|1|0.37|ENSG00000131023|chr6:149683485-149683485|C/-|frameshift_variant', 'nc|ENSG00000131023|O95835-2|LATS1', 'LATS1|p.D881Gfs*40|1|0.26|ENSG00000131023|chr6:149676689-149676690|-/C|frameshift_variant', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF'] 128064 15150 VRRLPGGG True NCI_RA007_Epitope_Rep3 810.4824196315798 810.48132993586 67.107 2 -0.8668478524130581 0.26242227247032224 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 68087 4709 LTPCHGAL True PC9_epitope_Rep6 810.4058091036599 810.40470993586 25.509 2 -0.8668925033933497 0.26242227247032224 1.0 ['nc|ENSG00000293543|Q6B8I1-4|DUSP13A'] 111672 14063 TLPFPGAVRR True PC9_epitope_Rep2 1112.6454622053998 1112.6443699358601 59.37 2 -0.8669129248113193 0.26242227247032224 1.0 ['ENST00000532780.5_1_11:122930757-122933127:-|nuORF'] 46664 11191 ITVLNISEIES True NCI_RA007_Epitope_Rep3 1216.6550833992399 1216.6539899358602 51.128 2 -0.8669425024652612 0.2624326959765973 1.0 ['ENSG00000115594|ENST00000410023|IL1R1'] 140053 28047 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 118.36 3 -0.8669979223099481 0.26245354210533756 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 63427 22503 LPGPPPPPTV True PC9_epitope_Rep1 970.5487678559 970.54766993586 91.359 2 -0.8670200562201201 0.26245354210533756 1.0 ['ENST00000532085.1_1_11:118900045-118900432:-|nuORF'] 100584 10419 SLQEIEKLEHK True NCI_RA007_Epitope_Rep2 1352.729979675 1352.72888993586 45.12 2 -0.8670845522536695 0.26246997315246573 1.0 ['ENST00000525040.5_1_11:9801967-9809483:-|nuORF'] 81931 12299 PSPLQREL True PC9_epitope_Rep5 938.5185303567799 938.51742993586 52.298 2 -0.8671230342294307 0.26246997315246573 1.0 ['nc|ENSG00000138669|Q13237-2|PRKG2', 'ENSG00000138669|ENST00000264399|PRKG2'] 19371 4246 ELNKPPLGP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 21.443 2 -0.8671269206034462 0.26246997315246573 1.0 ['ENST00000265085.9_1_5:173315710-173315878:+|nuORF'] 64914 16931 LSCHCHSC True PC9_epitope_Rep1 888.3040635404002 888.30296993586 69.948 2 -0.8671321626797127 0.26246997315246573 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 44051 23412 ILLFRRPLPK True PC9_epitope_Rep1 1251.8179472641098 1251.81631490379 94.838 3 -0.8671610273189074 0.26246997315246573 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 130092 7313 VTQRLLPP True H1975_Epitope_Rep3 922.5600012459398 922.55890993586 33.102 2 -0.8671716736177613 0.26246997315246573 1.0 ['HEATR5A-HECTD1|1|fusion', 'ENST00000552500.1_1_14:31841014-31844139:-|nuORF', 'ENST00000549185.5_3_14:31803609-31872202:-|nuORF', 'nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A'] 3445 16363 AGLFFFFFF True PC9_epitope_Rep5 1141.5636896440499 1141.5625899358602 67.938 2 -0.8671968363813181 0.26246997315246573 1.0 ['ENST00000237380.11_1_4:17628433-17628604:+|nuORF'] 12707 9518 DLFLVHYDCAE True H1975_Epitope_Rep2 1323.58053855999 1323.57944993586 41.581 2 -0.867267556722888 0.2624945245934069 1.0 ['nc|ENSG00000162006|Q96KJ4|MSLNL', 'ENSG00000162006|ENST00000543963|MSLNL'] 57307 4151 LEGLFFPEEK True NCI_RA007_Epitope_Rep2 1207.6124903112698 1207.6108349037902 20.785 3 -0.8673033908693001 0.2625109497301421 1.0 ['nc|ENSG00000159753|Q6F5E8-2|CARMIL2', 'ENSG00000159753|ENST00000334583|CARMIL2'] 130811 4511 VVEYECRPGYR True NCI_RA007_Epitope_Rep2 1369.6448701520499 1369.64323490379 22.179 3 -0.8673201404578044 0.2625109497301421 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 106317 19469 SVRSQVPAL True PC9_epitope_Rep1 955.5450794577898 955.5439899358599 79.704 2 -0.8673233878995832 0.2625109497301421 1.0 ['ENSG00000175809|ENST00000323684|CBLL2'] 15743 17333 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 73.445 2 -0.867334584467084 0.2625109497301421 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 31030 9129 GAVIVSTPQD True H1975_Epitope_Rep3 985.5080252427299 985.50692993586 40.104 2 -0.8673740463665323 0.2625109497301421 1.0 ['ENSG00000151413|ENST00000281081|NUBPL'] 11335 7934 DEYKEIFYRRN True PC9_epitope_Rep5 1531.7419413410298 1531.74028490379 35.459 3 -0.8673859868122632 0.2625109497301421 1.0 ['ENSG00000115339|ENST00000392701|GALNT3'] 47466 10183 IYIYTLKGMC True NCI_RA007_Epitope_Rep2 1203.60318858087 1203.60208993586 44.197 2 -0.867386388064975 0.2625109497301421 1.0 ['ENSG00000154237|ENST00000388948|LRRK1', 'ENST00000525395.2_1_15:101598200-101605355:+|nuORF', 'ENST00000525284.5_1_15:101602697-101609050:+|nuORF'] 106503 7475 SVVNAGSL True NCI_RA007_Epitope_Rep4 745.3970182417701 745.39646496793 35.399 1 -0.8674197718561418 0.2625176603560328 1.0 ['ENSG00000135917|ENST00000644224|SLC19A3'] 19261 22978 ELLKMRRCA True PC9_epitope_Rep1 1118.60525426954 1118.60414993586 93.183 2 -0.8674260379141462 0.2625176603560328 1.0 ['ENST00000433078.5_1_7:86848977-86849826:-|nuORF'] 131321 25511 VVRHLIRA True NCI_RA007_Epitope_Rep3 962.6137681542999 962.61266993586 110.29 2 -0.8675223678363417 0.2625563357398172 1.0 13509 5888 DPGAQLLQAS True H1975_Epitope_Rep2 998.50327421546 998.50216993586 27.634 2 -0.8675819014969316 0.2625771724849187 1.0 ['ENST00000482272.5_1_2:219266889-219267112:+|nuORF'] 71962 8622 MPVRLLGHSPV True NCI_RA007_Epitope_Rep1 1204.67504808152 1204.67341490379 37.539 3 -0.8675926481938776 0.2625771724849187 1.0 ['nc|ENSG00000101224|P30305-2|CDC25B', 'ENSG00000101224|ENST00000245960|CDC25B', 'nc|ENSG00000101224|P30305-4|CDC25B'] 46157 7857 ITCRYRDYRYP True H1975_Epitope_Rep1 1504.7245174550799 1504.7234299358602 35.174 2 -0.8676482709637363 0.2625875904159132 1.0 ['ENSG00000171714|ENST00000324559|ANO5', 'ANO5|p.L845*|1|0.27|ENSG00000171714|chr11:22279553-22279553|T/-|frameshift_variant', 'ENST00000532043.1_1_11:22294373-22299379:+|nuORF'] 138518 9416 YRKMKERL True PC9_epitope_Rep6 1122.6331832695398 1122.6315449037902 46.437 3 -0.8676972083774425 0.26259429830757497 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 60901 22626 LKRRIWRMPLF True PC9_epitope_Rep6 1514.9020283245798 1514.9003849037902 100.07 3 -0.8677510771390059 0.26259429830757497 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 60428 18075 LIKRYQNKYPK True H1975_Epitope_Rep3 1449.84561856393 1449.84452993586 75.721 2 -0.8677816967237186 0.2626188424428214 1.0 ['CHSY3|p.G676R|1|0.33|ENSG00000198108|chr5:130185168-130185168|G/C|missense_variant'] 57072 12877 LEEKNKNFQKE True H1975_Epitope_Rep1 1405.7201432672898 1405.71904993586 54.602 2 -0.867799098569876 0.2626255491672435 1.0 ['nc|ENSG00000128487|Q5M775-5|SPECC1', 'nc|ENSG00000128487|Q5M775-3|SPECC1', 'nc|ENSG00000128487|Q5M775-2|SPECC1', 'nc|ENSG00000128487|Q5M775-4|SPECC1', 'ENSG00000128487|ENST00000395527|SPECC1', 'SPECC1|p.N303Tfs*63|1|0.14|ENSG00000128487|chr17:20204950-20204950|A/-|frameshift_variant'] 959 7902 ADYYMASP True PC9_epitope_Rep2 916.3636695081599 916.36256993586 35.761 2 -0.8678072308375651 0.2626255491672435 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant', 'REV3L|p.M1011Nfs*5|1|0.26|ENSG00000009413|chr6:111375323-111375324|-/T|frameshift_variant'] 37864 7450 HDTTAAAI True PC9_epitope_Rep6 798.3871818340599 798.38608993586 37.89 2 -0.8678186700631917 0.2626322555127064 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2', 'ENST00000502665.1_1_4:187126176-187131792:+|nuORF'] 122248 15396 VGRRAAKA True NCI_RA007_Epitope_Rep3 827.5089687325898 827.5084249679301 68.116 1 -0.8678197933553617 0.2626322555127064 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 62242 12642 LLQARGVP True PC9_epitope_Rep2 852.51813643396 852.51702993586 53.937 2 -0.8678509816804183 0.26265679737823483 1.0 ['nc|ENSG00000099889|O00192-2|ARVCF', 'ENSG00000099889|ENST00000263207|ARVCF', 'ENST00000495096.5_1_22:19958242-19966598:-|nuORF'] 24935 10796 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 46.596 2 -0.8679015916618484 0.26267691177716884 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 11796 8650 DHKEITQQL True PC9_epitope_Rep1 1110.56693710118 1110.5658499358601 38.111 2 -0.8679106964962063 0.26267691177716884 1.0 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant', 'ENSG00000133704|ENST00000256079|IPO8', 'nc|ENSG00000133704|O15397-2|IPO8'] 134581 24912 WVVRLGGRG True NCI_RA007_Epitope_Rep1 998.5773826455797 998.57628993586 103.11 2 -0.8679164955077185 0.26267691177716884 1.0 ['ENST00000261191.11_1_12:27091099-27091231:-|nuORF'] 7054 10505 AQVCQLERL True NCI_RA007_Epitope_Rep5 1058.5542642425 1058.55316993586 47.04 2 -0.8679314885062062 0.26267691177716884 1.0 ['nc|ENSG00000241935|Q86XE5-3|HOGA1', 'ENSG00000241935|ENST00000370646|HOGA1'] 101901 24415 SPLLLLLLVP True PC9_epitope_Rep1 1076.72091856144 1076.7198299358602 98.754 2 -0.8679683534912743 0.26267691177716884 1.0 ['ENSG00000050393|ENST00000379170|MCUR1', 'nc|ENSG00000050393|Q96AQ8-2|MCUR1'] 102446 12619 SPWTRFQWRRR True PC9_epitope_Rep3 1574.83309681762 1574.83144490379 53.562 3 -0.867976745819959 0.26267691177716884 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 139416 19175 YTEKEGPLL True PC9_epitope_Rep6 1048.54407639828 1048.5429699358601 86.409 2 -0.8680903380593797 0.262683615819209 1.0 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000546416.5_1_12:95425225-95443026:-|nuORF', 'nc|ENSG00000120798|P13056-2|NR2C1', 'nc|ENSG00000120798|P13056-3|NR2C1'] 99446 14540 SLEKEKTL True PC9_epitope_Rep1 946.53351171458 946.53240993586 60.752 2 -0.8681249935450098 0.262683615819209 1.0 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 16465 13854 EELSDAMHGTY True H1975_Epitope_Rep2 1251.5077675425498 1251.5066699358601 58.435 2 -0.8681889373432456 0.26271856727211096 1.0 ['ENSG00000179399|ENST00000377067|GPC5'] 126750 13500 VPSERSLSL True PC9_epitope_Rep6 986.53965972418 986.53856993586 63.638 2 -0.8681994838043453 0.26271856727211096 1.0 ['ENSG00000065989|ENST00000380702|PDE4A'] 24966 12017 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 54.395 2 -0.8682714819112057 0.2627289804104346 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 104472 19548 SSLVITTKL True NCI_RA007_Epitope_Rep2 960.58554728744 960.58444993586 80.978 2 -0.8683329164175672 0.26273939325461837 1.0 ['nc|ENSG00000169282|Q14722-2|KCNAB1', 'nc|ENSG00000169282|Q14722-3|KCNAB1', 'ENSG00000169282|ENST00000490337|KCNAB1'] 98790 12264 SISSRFSSL True PC9_epitope_Rep3 982.5083595959001 982.50726993586 52.201 2 -0.8684379585315788 0.2627780523974296 1.0 ['chr3:118905718-119045392|154|10.07|0.0|19.94|-|2|TE_info:L1PA3,L1PA3_dup2038,L1,LINE,donor,+,119045392,119051153|IGSF11,None|55', 'chr3:153927317-153979854|138|13.17|0.05|7.92|-|2|TE_info:L1PB1,L1PB1_dup2586,L1,LINE,donor,+,153979854,153983404|LINC02006,None|2', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|193|1|anti-sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|407|3|anti-sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|330|3|anti-sense', 'L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|324|3|anti-sense', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|181|2|anti-sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|325|3|anti-sense', 'L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|190|1|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|183|1|anti-sense', 'chr8:91197524-91200613|289|13.1|0.22|5.87|+|1|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|63', 'chr8:127290060-127311920|196|16.7|0.02|9.43|-|0|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|5', 'chr8:127290060-127311835|257|24.31|0.0|12.5|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311835,127315431|CASC8,None|5', 'chr6:83315413-83334213|140|10.1|0.0|19.95|-|1|TE_info:L1HS,L1HS_dup688,L1,LINE,donor,+,83334213,83339981|ME1,None|25', 'chr6:45020632-45062708|281|10.85|0.01|10.56|-|0|TE_info:L1PA2,L1PA2_dup1868,L1,LINE,donor,+,45062708,45068476|SUPT3H,None|49', 'chr6:109250991-109254448|382|11.17|0.13|6.42|+|2|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|24', 'chr2:222572022-222586338|111|10.41|0.25|5.35|-|1|TE_info:L1PA5,L1PA5_dup1583,L1,LINE,donor,+,222586338,222590526|FARSB,None|53', 'chr1:245814415-245816795|376|16.24|0.01|10.82|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|49', 'chr11:102374933-102377496|150|10.29|0.03|8.55|+|2|TE_info:L1PA2,L1PA2_dup3799,L1,LINE,donor,-,102369167,102374933|None,BIRC2|25', 'chr14:58012150-58032884|335|10.01|0.03|8.51|-|2|TE_info:L1PA2,L1PA2_dup4307,L1,LINE,donor,+,58032884,58038561|ARMH4,None|47', 'chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|22', 'chr15:53523322-53684228|265|18.12|0.04|8.74|-|2|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|50', 'chr2:113477199-113482177|379|28.75|0.21|7.07|+|2|TE_info:L1PA3,L1PA3_dup1127,L1,LINE,donor,-,113471482,113477199|None,ZNG1B|36', 'chr1:245764149-245816795|362|34.57|0.05|9.58|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|49', 'chr3:195070111-195087933|359|13.86|0.27|5.66|-|2|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|23', 'chr3:195070111-195088018|311|10.27|0.09|6.77|-|0|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195088018,195093677|XXYLT1,None|23', 'chr3:195086022-195087933|373|11.99|0.24|5.62|-|2|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|23', 'chr3:118905718-118914503|368|14.39|0.0|11.97|-|1|TE_info:L1PA2,L1PA2_dup926,L1,LINE,donor,+,118914503,118920271|IGSF11,None|25', 'chr6:45020632-45176322|132|12.64|0.0|13.05|-|0|TE_info:L1PA3,L1PA3_dup4060,L1,LINE,donor,+,45176322,45181869|SUPT3H,None|52', 'L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|236|3|anti-sense', 'chr5:90929313-90965415|333|22.99|0.23|6.64|+|0|TE_info:L1PA2,L1PA2_dup1646,L1,LINE,donor,-,90923631,90929313|None,ADGRV1|48', 'L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|346|3|anti-sense'] 86295 7358 QQEQNLKQR True NCI_RA007_Epitope_Rep1 1170.6105332486597 1170.6094299358601 32.615 2 -0.8684622545204551 0.2628025873513544 1.0 ['ENSG00000267909|ENST00000599174|CCDC177'] 33060 5699 GKDVTLQGE True NCI_RA007_Epitope_Rep1 945.47672511445 945.47562993586 26.226 2 -0.8684866316309751 0.26281299871481634 1.0 ['nc|ENSG00000103248|Q2M296-4|MTHFSD', 'nc|ENSG00000103248|Q2M296-3|MTHFSD', 'nc|ENSG00000103248|Q2M296-2|MTHFSD', 'ENSG00000103248|ENST00000360900|MTHFSD'] 111919 11012 TLRTRFKKI True NCI_RA007_Epitope_Rep4 1161.7346115629698 1161.73297490379 49.224 3 -0.8685314594230127 0.26281969806098093 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.Q2856Rfs*14|1|0.22|ENSG00000007174|chr17:11807876-11807876|C/-|frameshift_variant'] 45410 5627 ISDRYGAP True PC9_epitope_Rep3 877.4293809992099 877.42828993586 26.722 2 -0.8685322004304601 0.26281969806098093 1.0 ['ENSG00000170788|ENST00000372202|DYDC1', 'nc|ENSG00000170788|Q8WWB3-2|DYDC1'] 112111 6723 TLTSAGLL True NCI_RA007_Epitope_Rep2 774.44871946146 774.44762993586 30.765 2 -0.8685640579796063 0.2628360822413014 1.0 ['ENST00000553886.1_1_14:51902791-51902986:+|nuORF'] 22530 6637 ETLEKQVK True NCI_RA007_Epitope_Rep1 973.54441075145 973.54330993586 29.83 2 -0.8685975628802907 0.2628360822413014 1.0 ['ENSG00000144820|ENST00000273352|ADGRG7'] 66959 9576 LSYSLQTP True H1975_Epitope_Rep1 907.4650978015899 907.46400993586 41.758 2 -0.8687137749965947 0.2628360822413014 1.0 ['nc|ENSG00000135424|Q13683-9|ITGA7', 'ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7', 'ENST00000557058.1_1_12:56089304-56090183:-|nuORF'] 36636 7481 GVLPGGHL True NCI_RA007_Epitope_Rep4 748.42317341996 748.42206993586 35.421 2 -0.8687138452494046 0.2628360822413014 1.0 ['ENST00000530254.6_1_17:27426730-27430635:-|nuORF'] 19176 13614 ELKGFNLNP True PC9_epitope_Rep3 1030.54474510462 1030.54364993586 57.43 2 -0.8687594882837832 0.2628360822413014 1.0 ['ENSG00000088356|ENST00000202017|PDRG1'] 43980 15798 ILGPLCMPLV True PC9_epitope_Rep3 1054.5918956211801 1054.5907899358601 65.921 2 -0.868763876551848 0.2628360822413014 1.0 ['ENSG00000180815|ENST00000338883|MAP3K15'] 25028 2339 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 13.522 2 -0.8687676392104143 0.2628360822413014 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 89245 19167 REKILVKKPWR True H1975_Epitope_Rep2 1451.9088875268299 1451.90725490379 79.555 3 -0.8688194285745897 0.2628464916616067 1.0 ['ENST00000495270.1_1_9:130699195-130699321:-|nuORF'] 33468 13222 GLGPRELLT True PC9_epitope_Rep1 954.5498304850599 954.54872993586 55.722 2 -0.8688421294558555 0.2628569007879353 1.0 ['ENST00000394071.6_2_14:74184720-74184954:-|nuORF'] 108637 6745 TEKLPKAP True H1975_Epitope_Rep2 882.5174677276199 882.51636993586 30.859 2 -0.8689333657650408 0.26287771815871225 1.0 ['nc|ENSG00000030304|O15146-3|MUSK', 'nc|ENSG00000030304|O15146-2|MUSK', 'ENSG00000030304|ENST00000374448|MUSK'] 37826 4416 HDGWPMICLEK True H1975_Epitope_Rep3 1327.6053138391896 1327.6042099358601 22.108 2 -0.8689415187295656 0.26287771815871225 1.0 ['ENST00000450600.1_1_7:56296937-56297204:-|nuORF', 'nc|ENSG00000107443|Q5T5M9-2|CCNJ', 'nc|ENSG00000107443|Q5T5M9|CCNJ', 'ENSG00000107443|ENST00000465148|CCNJ'] 68075 15339 LTNTVYHSL True PC9_epitope_Rep2 1046.53965972418 1046.53856993586 64.281 2 -0.8689820477363636 0.26291265425997573 1.0 ['ENST00000596245.1_1_19:8590207-8591472:-|nuORF'] 111736 15062 TLQEERYRYER True NCI_RA007_Epitope_Rep2 1541.7586540343298 1541.7575499358602 63.274 2 -0.8690060161344036 0.26291265425997573 1.0 ['ENSG00000057704|ENST00000261226|TMCC3'] 114514 15395 TSGKKGGK True NCI_RA007_Epitope_Rep1 761.4395517600899 761.43844993586 63.961 2 -0.8691367915934494 0.2629401632168977 1.0 ['ENSG00000099284|ENST00000373255|MACROH2A2'] 82340 19070 PTSSLINKVV True PC9_epitope_Rep5 1056.61791004488 1056.6168099358601 78.382 2 -0.8691372017939974 0.2629401632168977 1.0 ['ENST00000341307.6_1_11:63526292-63526517:+|nuORF'] 78088 12290 PALWEVEA True PC9_epitope_Rep1 913.4545331178898 913.45342993586 52.127 2 -0.8691667758051267 0.2629401632168977 1.0 ['ENST00000443892.2_1_1:2481410-2485587:-|nuORF', 'chr17:81953267-81953858|125|14.4|0.24|5.89|-|2|TE_info:AluSq2,AluSq2_dup53237,Alu,SINE,donor,-,81953858,81954077|NOTUM,None|1'] 113275 16470 TQGKKRKA True NCI_RA007_Epitope_Rep3 915.5613982282698 915.56030993586 72.562 2 -0.8691698597124461 0.2629401632168977 1.0 ['nc|ENSG00000153774|Q9UEE9-2|CFDP1', 'ENST00000566901.5_1_16:75428986-75467250:-|nuORF', 'ENSG00000153774|ENST00000283882|CFDP1'] 129631 9997 VTHEQAVAI True PC9_epitope_Rep1 966.5134449763399 966.51234993586 43.319 2 -0.8692063342081255 0.2629750945953578 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF'] 125841 18201 VNPIYRQVPR True PC9_epitope_Rep4 1240.70403971068 1240.70294993586 78.078 2 -0.8692218742555324 0.2629750945953578 1.0 ['ARHGAP6|p.L403V|1|0.18|ENSG00000047648|chrX:11186302-11186302|G/C|missense_variant'] 78095 11644 PANAPDYCI True PC9_epitope_Rep6 962.41676771018 962.41566993586 55.911 2 -0.8692504834410697 0.26298550028942946 1.0 ['ENSG00000189167|ENST00000533490|ZAR1L'] 81492 24549 PQPRRRPPT True PC9_epitope_Rep2 1103.6312091235898 1103.6301099358602 100.05 2 -0.8693338815817031 0.26303454702037243 1.0 ['SCRT1|p.F15Sfs*192|1|0.15|ENSG00000261678|chr8:144336128-144336128|C/-|frameshift_variant'] 31264 4300 GDRGPRRQRL True NCI_RA007_Epitope_Rep1 1209.6802845743298 1209.67864490379 20.837 3 -0.8693918183433141 0.26303454702037243 1.0 ['ENST00000299441.4_1_11:6676849-6676939:-|nuORF'] 11394 14328 DFILQVPV True PC9_epitope_Rep5 929.52221875489 929.52112993586 60.113 2 -0.8694438267727587 0.26307318725999546 1.0 ['ENST00000570265.5_1_15:36871929-37039277:+|nuORF', 'ENST00000566677.1_1_15:37001404-37100651:+|nuORF', 'nc|ENSG00000186073|Q9Y2V0-2|CDIN1', 'ENSG00000186073|ENST00000566621|CDIN1'] 80331 11059 PLFRSKEDP True PC9_epitope_Rep2 1087.56620882519 1087.5651099358602 47.856 2 -0.8696744930125209 0.2631222294378406 1.0 ['ENSG00000116685|ENST00000376572|KIAA2013'] 98339 6283 SIGQPPLP True PC9_epitope_Rep3 807.4490538146299 807.44794993586 29.201 2 -0.8696919430470578 0.2631222294378406 1.0 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 76764 5743 NTVLRQEL True PC9_epitope_Rep5 971.5399940773499 971.53888993586 27.083 2 -0.8697107272462111 0.26316086680313405 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 109461 10163 TGVFAFSVM True H1975_Epitope_Rep3 957.46298962661 957.46188993586 44.134 2 -0.8697379025705477 0.2631742401784328 1.0 ['ENSG00000070729|ENST00000251102|CNGB1', 'nc|ENSG00000070729|Q14028-4|CNGB1', 'nc|ENSG00000070729|Q14028-2|CNGB1'] 136818 21208 YITERNYP True PC9_epitope_Rep3 1054.5083595959 1054.5072699358602 86.866 2 -0.8697458279811922 0.2631742401784328 1.0 ['ENSG00000188501|ENST00000695545|LCTL', 'LCTL|p.S356F|1|0.27|ENSG00000188501|chr15:66553114-66553114|G/A|missense_variant', 'nc|ENSG00000188501|Q6UWM7-2|LCTL'] 65494 10930 LSFPGGSLL True H1975_Epitope_Rep2 889.49091862661 889.48982993586 47.075 2 -0.8697459004329118 0.2631742401784328 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1'] 11085 6285 DEAM[Oxidation]RRLQERM[Oxidation] True H1975_Epitope_Rep1 1465.6765820473697 1465.67548993586 29.242 2 -0.8697634374306265 0.2631742401784328 1.0 ['nc|ENSG00000161618|Q8IZ83-3|ALDH16A1', 'ENSG00000161618|ENST00000293350|ALDH16A1', 'ENST00000599652.5_1_19:49965164-49969478:+|nuORF'] 117573 12563 VAGLCNPETVP True NCI_RA007_Epitope_Rep1 1098.53794547202 1098.5368499358601 52.846 2 -0.8698061842100285 0.26318092629974166 1.0 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 128209 23917 VRVGALLL True NCI_RA007_Epitope_Rep4 839.5592729699499 839.5587249679301 103.73 1 -0.8698083362018821 0.26318092629974166 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 79295 23159 PGIVKKLLRR True PC9_epitope_Rep6 1178.7975461726999 1178.7964499358602 102.18 2 -0.8699246198809413 0.26322995920556724 1.0 ['ENSG00000180801|ENST00000315366|ARSJ'] 133577 21220 WIEIAYGT True PC9_epitope_Rep3 951.4701831820299 951.46908993586 86.912 2 -0.8699511347169483 0.26322995920556724 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1', 'nc|ENSG00000136636|Q9Y597-2|KCTD3', 'ENSG00000136636|ENST00000259154|KCTD3'] 119966 7183 VEYRLVQS True PC9_epitope_Rep3 992.5290950404799 992.52798993586 32.642 2 -0.8699996923497831 0.2632403590988651 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant', 'PLXNA3|p.S956Lfs*51|1|0.53|ENSG00000130827|chrX:154466439-154466440|-/T|frameshift_variant'] 82394 14652 PVAAPAPP True H1975_Epitope_Rep2 718.40137534622 718.40082496793 61.517 1 -0.8700245400879002 0.2632507586985673 1.0 ['PCDH15|p.P1436A|1|0.37|ENSG00000150275|chr10:53827454-53827454|G/C|missense_variant'] 66405 21198 LSRGLPRELA True PC9_epitope_Rep5 1110.65094150866 1110.6498499358602 86.585 2 -0.8700556278781504 0.26327527312762894 1.0 ['ENSG00000126261|ENST00000246548|UBA2'] 123767 7679 VISHLIDN True PC9_epitope_Rep1 909.49198125577 909.49088993586 34.359 2 -0.8700738934986469 0.26328567194094316 1.0 ['PLCH1|p.N1188Mfs*12|1|0.11|ENSG00000114805|chr3:155482487-155482487|T/-|frameshift_variant', 'nc|ENSG00000114805|Q4KWH8-2|PLCH1', 'ENSG00000114805|ENST00000460012|PLCH1', 'nc|ENSG00000114805|Q4KWH8|PLCH1'] 36763 11155 GVPEDYLP True PC9_epitope_Rep6 888.4228986364399 888.42180993586 53.861 2 -0.8701751631512691 0.26332429990966577 1.0 ['ZEB1|p.D60Y|1|0.48|ENSG00000148516|chr10:31461156-31461156|G/T|missense_variant'] 108561 20171 TEGVKTFSF True PC9_epitope_Rep2 1014.5022115863 1014.50110993586 83.0 2 -0.8702522068584765 0.2633450952717008 1.0 ['nc|ENSG00000122145|Q9Y458-2|TBX22', 'ENSG00000122145|ENST00000373296|TBX22'] 34059 17467 GNRHARRV True NCI_RA007_Epitope_Rep5 964.54272847236 964.54162993586 73.973 2 -0.8702713740133393 0.2633450952717008 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 113243 7409 TQEAEAEKPRK True NCI_RA007_Epitope_Rep2 1285.6626283911698 1285.66152993586 33.445 2 -0.8703142063825571 0.2633554925124557 1.0 ['ENSG00000185864|ENST00000682606|NPIPB4', 'ENSG00000169203|ENST00000550665|NPIPB12', 'ENSG00000254206|ENST00000698511|NPIPB11', 'nc|ENSG00000243716|C9JG80|NPIPB4', 'ENSG00000198064|ENST00000697092|NPIPB13', 'ENSG00000243716|ENST00000424340|NPIPB5', 'nc|ENSG00000169246|Q92617|NPIPB3', 'nc|ENSG00000169246|Q92617-6|NPIPB3', 'nc|ENSG00000169246|Q92617-5|NPIPB3', 'ENSG00000169246|ENST00000542817|NPIPB3', 'nc|ENSG00000169246|Q92617-3|NPIPB3', 'nc|ENSG00000169246|Q92617-2|NPIPB3'] 120097 11632 VFHPYHFELVK True H1975_Epitope_Rep3 1414.7397565130598 1414.7386499358602 49.876 2 -0.8703548100896208 0.26338000338734263 1.0 ['nc|ENSG00000140481|Q8N5R6|CCDC33', 'nc|ENSG00000140481|Q8N5R6-2|CCDC33', 'ENSG00000140481|ENST00000398814|CCDC33'] 27179 18827 FLSLCQRRP True H1975_Epitope_Rep2 1118.60188314126 1118.6007899358601 78.172 2 -0.8705124793434534 0.26343274102719716 1.0 ['ENST00000405520.5_1_20:44441294-44441366:+|nuORF'] 114934 12030 TTFIDMQWRYK True H1975_Epitope_Rep3 1487.7231204727498 1487.72202993586 51.434 2 -0.87056118107658 0.2634498137066727 1.0 ['ENSG00000177807|ENST00000644903|KCNJ10'] 128185 17461 VRSVRGGGV True H1975_Epitope_Rep1 885.5144480358498 885.51334993586 72.651 2 -0.8705685404397564 0.2634498137066727 1.0 ['ENST00000566203.6_1_20:33859916-33865902:-|nuORF'] 83250 9860 QADPRWWRRRR True NCI_RA007_Epitope_Rep2 1581.85014386409 1581.84850490379 42.979 3 -0.8705761841704063 0.2634498137066727 1.0 ['ENST00000510882.3_1_6:22569875-22570217:+|nuORF'] 25704 6987 FFGSGFTAA True PC9_epitope_Rep5 903.41266830591 903.41156993586 31.843 2 -0.8705952005736064 0.2634527724071748 1.0 ['ENST00000547877.5_1_12:51442361-51442637:+|nuORF'] 15971 8447 EDVYYSNL True NCI_RA007_Epitope_Rep2 1001.43419159613 1001.43308993586 37.499 2 -0.8706553122871394 0.2634527724071748 1.0 ['ENSG00000243627|ENST00000450895|SMIM34'] 19612 15307 ELRLYVQTAT True PC9_epitope_Rep4 1192.6451874218797 1192.6440899358602 66.812 2 -0.8706862401041221 0.2634527724071748 1.0 ['ENST00000222120.7_1_19:11447875-11448118:-|nuORF'] 130972 18802 VVKASTRSQTS True NCI_RA007_Epitope_Rep5 1162.6305999868998 1162.6295099358601 79.162 2 -0.8707098884902743 0.263455730857159 1.0 ['ENST00000412638.2_1_1:227884598-227884916:-|nuORF'] 53356 4102 KTTRHMEMGVK True NCI_RA007_Epitope_Rep2 1316.66931107808 1316.6682099358602 20.595 2 -0.8707624787852744 0.263455730857159 1.0 ['ENST00000440884.7_1_14:103852397-103871488:+|nuORF'] 94313 27225 RWTHLLRLLRH True PC9_epitope_Rep5 1499.89496879819 1499.89333490379 111.52 3 -0.8707685048072551 0.263455730857159 1.0 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 60241 17234 LIDSHFLIP True PC9_epitope_Rep1 1053.58588164061 1053.58478993586 71.108 2 -0.8708814725312787 0.26349434824943907 1.0 ['ENST00000562866.1_1_16:89783858-89784437:+|nuORF'] 59012 8686 LGAMMLPAIAP True NCI_RA007_Epitope_Rep5 1083.5820592134698 1083.5809699358601 40.075 2 -0.8709623259746091 0.2635076975178856 1.0 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ENST00000559180.1_1_10:135086915-135090354:-|nuORF'] 105029 23622 STIKLLIGVIA True NCI_RA007_Epitope_Rep4 1126.7325458743 1126.7314499358602 102.46 2 -0.870987615913733 0.2635076975178856 1.0 ['LGR5|p.P591T|1|0.35|ENSG00000139292|chr12:71583781-71583781|C/A|missense_variant'] 66468 15186 LSRRRQRAFP True PC9_epitope_Rep1 1285.74797021133 1285.74686993586 63.235 2 -0.870989372329675 0.2635076975178856 1.0 ['ENSG00000204946|ENST00000434415|ZNF783'] 7722 11915 ASRRPRARPPS True H1975_Epitope_Rep3 1249.7115847026098 1249.71048993586 50.984 2 -0.8709974934226223 0.2635076975178856 1.0 ['ENSG00000142347|ENST00000644032|MYO1F'] 118546 5974 VDVMARHVVQP True NCI_RA007_Epitope_Rep1 1249.6601262933698 1249.6584749037902 27.283 3 -0.8710812044254701 0.26354631145227747 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 90381 23602 RIKRLEELEAK True PC9_epitope_Rep4 1383.8197977389098 1383.81814490379 99.093 3 -0.8711707619810577 0.2635812050232821 1.0 ['ENSG00000158417|ENST00000289371|EIF5B'] 6029 4214 APLPYSFSPD True H1975_Epitope_Rep3 1092.5127762700001 1092.51166993586 21.327 2 -0.8711733642434775 0.2635812050232821 1.0 ['ENST00000477970.1_1_1:44086064-44087671:+|nuORF'] 59435 9878 LGLTQTCETLK True H1975_Epitope_Rep3 1205.6325741328499 1205.6314699358602 43.025 2 -0.8712780175129485 0.26363020656959024 1.0 ['ENSG00000169896|ENST00000544665|ITGAM', 'nc|ENSG00000169896|P11215-2|ITGAM'] 94159 7810 RWKEMLDKCL True H1975_Epitope_Rep1 1320.6682484489197 1320.6671499358602 34.995 2 -0.8712988052647379 0.26363020656959024 1.0 ['ENSG00000092850|ENST00000207457|TEKT2'] 134179 25281 WRLLIFLGLL True PC9_epitope_Rep3 1242.7852501534999 1242.78361490379 102.65 3 -0.8713382364404237 0.2636368767107825 1.0 ['nc|ENSG00000131059|Q9BQP9-2|BPIFA3', 'ENSG00000131059|ENST00000375454|BPIFA3'] 125383 21460 VLSVPAVSV True PC9_epitope_Rep1 869.52221875489 869.52167496793 87.387 1 -0.8713781040033345 0.2636368767107825 1.0 ['ENST00000564333.1_1_16:2487101-2487449:+|nuORF'] 94314 27299 RWTHLLRLLRH True PC9_epitope_Rep5 1499.89496879819 1499.89333490379 111.86 3 -0.8714034294660844 0.263647266313933 1.0 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 48150 5622 KAQLHFAAE True PC9_epitope_Rep5 1013.5294293936499 1013.52832993586 26.627 2 -0.8714186755854308 0.26365393569140905 1.0 ['ENST00000310256.6_2_1:231131542-231131617:+|nuORF'] 57342 12150 LEGTYTSHWRL True H1975_Epitope_Rep3 1361.67279915205 1361.67170993586 51.904 2 -0.8714373741979108 0.26365393569140905 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 123497 9246 VIGRISSIREF True NCI_RA007_Epitope_Rep1 1275.72992010535 1275.7288299358602 39.964 2 -0.8714595190877662 0.2636643246141257 1.0 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 57106 12805 LEEMKRSL True PC9_epitope_Rep3 1004.5324661687599 1004.53136993586 54.277 2 -0.8715539737888266 0.263670993227991 1.0 ['ENSG00000116783|ENST00000326637|TNNI3K', 'nc|ENSG00000116783|Q59H18-1|TNNI3K', 'TNNI3K|p.L793M|1|0.54|ENSG00000116783|chr1:74540259-74540259|C/A|missense_variant'] 99 6821 AAARFGPR True PC9_epitope_Rep3 844.4667695674398 844.46566993586 31.254 2 -0.87155726781098 0.263670993227991 1.0 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000111275|P05091-2|ALDH2', 'ENSG00000111275|ENST00000261733|ALDH2'] 21961 5918 ESLLQRQLDP True H1975_Epitope_Rep3 1197.6353510141698 1197.63424993586 27.772 2 -0.8715921046013434 0.2636813814703517 1.0 ['ENSG00000185038|ENST00000389758|MROH2A'] 64405 11149 LQREWRFLWNF True H1975_Epitope_Rep1 1593.8204664452498 1593.81883490379 47.852 3 -0.8717367739754873 0.2637482012358568 1.0 ['ENSG00000215262|ENST00000399881|KCNU1', 'KCNU1|p.Y774Sfs*18|1|0.17|ENSG00000215262|chr8:36909525-36909525|A/-|frameshift_variant'] 43695 5679 IINWCQHWFEY True NCI_RA007_Epitope_Rep1 1537.6812556607701 1537.67959490379 26.149 3 -0.8718003512851168 0.26375114622275514 1.0 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 10852 4405 DALAAGRLPD True NCI_RA007_Epitope_Rep3 997.51925863277 997.51816993586 24.106 2 -0.8718061662096084 0.26375114622275514 1.0 ['nc|ENSG00000136146|Q9NPJ6-2|MED4', 'ENSG00000136146|ENST00000258648|MED4'] 55146 11370 LAMWKKLAEWP True PC9_epitope_Rep1 1371.7373139849099 1371.7362099358602 48.615 2 -0.8718356220035163 0.26375114622275514 1.0 ['ENSG00000170836|ENST00000305921|PPM1D', 'nc|ENSG00000170836|O15297-2|PPM1D'] 47119 11961 IVWSEHSRD True PC9_epitope_Rep3 1127.53597132607 1127.53432490379 51.032 3 -0.8718670884968388 0.26377191868748856 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 133999 5004 WPRCWWPCWRR True NCI_RA007_Epitope_Rep2 1630.7550468210598 1630.75285987172 24.089 4 -0.8718948050574828 0.26377191868748856 1.0 ['ENST00000534167.5_1_8:145168880-145169283:+|nuORF'] 36989 15156 GVRRRRPPR True NCI_RA007_Epitope_Rep4 1148.7115251329599 1148.71042993586 65.883 2 -0.8720641208473848 0.2638246247601851 1.0 ['ENSG00000172986|ENST00000389617|GXYLT2'] 131444 18706 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 78.774 2 -0.8720943105368362 0.2638350096629943 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 10945 6562 DAWRRLREPAP True NCI_RA007_Epitope_Rep5 1365.7265660604098 1365.72493490379 31.903 3 -0.8721232577058106 0.2638557785896658 1.0 ['ENST00000603928.2_2_9:136890980-136891148:+|nuORF'] 44492 7660 INVPVSLAT True PC9_epitope_Rep1 912.52803241132 912.52692993586 34.287 2 -0.8721324075996456 0.2638557785896658 1.0 ['ENST00000498666.5_1_21:46313282-46313576:-|nuORF'] 53282 7764 KTIQGILHE True H1975_Epitope_Rep1 1037.5869442697697 1037.58584993586 34.822 2 -0.8721879754721866 0.263876546344491 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'LYST|p.L2265Ifs*29|1|0.34|ENSG00000143669|chr1:235759054-235759060|CAACAAG/-|frameshift_variant', 'nc|ENSG00000143669|Q99698-2|LYST', 'ENST00000489585.5_1_1:235926109-235996891:-|nuORF'] 11369 5784 DFFWNETWYLK True H1975_Epitope_Rep1 1547.7085159544301 1547.70688490379 27.32 3 -0.8722206979610838 0.263876546344491 1.0 ['ENSG00000172893|ENST00000355527|DHCR7'] 39283 10644 HLPLPEQI True H1975_Epitope_Rep1 945.5283667644901 945.52726993586 45.899 2 -0.8722360728390322 0.26389731292756896 1.0 ['ENSG00000149262|ENST00000534064|INTS4'] 41460 7533 IAWPDWREKLH True NCI_RA007_Epitope_Rep1 1449.75171817909 1449.7500749037902 33.295 3 -0.8722510336891413 0.26389731292756896 1.0 ['ENST00000307063.8_1_5:159519224-159519386:-|nuORF'] 46410 12200 ITKIHSKRF True H1975_Epitope_Rep1 1128.67676233368 1128.67566993586 51.947 2 -0.8723079233404395 0.26390612659370416 1.0 ['SECISBP2L|p.A823Qfs*12|1|0.13|ENSG00000138593|chr15:48996524-48996524|A/-|frameshift_variant', 'ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L'] 37016 4965 GVRVMNCSA True PC9_epitope_Rep1 935.4317065816699 935.43060993586 23.957 2 -0.8723204841274904 0.26390612659370416 1.0 ['nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 136115 13929 YGETWHKGGIL True PC9_epitope_Rep2 1259.6298717109098 1259.6287699358602 58.857 2 -0.8723437800137144 0.26390612659370416 1.0 ['ENSG00000085377|ENST00000652536|PREP'] 95864 7360 SDMVTVAK True NCI_RA007_Epitope_Rep5 849.42660411789 849.4260549679301 34.99 1 -0.8723601477621185 0.26390612659370416 1.0 ['IQGAP3|p.A1273T|1|0.3|ENSG00000183856|chr1:156534065-156534065|C/T|missense_variant'] 80486 7045 PLLFYHFWRYF True H1975_Epitope_Rep1 1587.80269112279 1587.8010449037902 32.131 3 -0.8723635239687701 0.26390612659370416 1.0 ['RB1-CNIH3|1|fusion', 'ENSG00000143786|ENST00000272133|CNIH3'] 118195 18203 VAVWWRFGI True PC9_epitope_Rep2 1132.6181848283998 1132.6170899358601 75.325 2 -0.8723848538311638 0.26390612659370416 1.0 ['ENSG00000064115|ENST00000343028|TM7SF3'] 110965 15760 TLDAQDVLA True PC9_epitope_Rep3 944.4814761417199 944.48036993586 65.777 2 -0.8723888724678782 0.26390612659370416 1.0 ['ENSG00000130396|ENST00000683244|AFDN', 'nc|ENSG00000130396|P55196-2|AFDN', 'nc|ENSG00000130396|P55196-6|AFDN', 'nc|ENSG00000130396|P55196-3|AFDN', 'nc|ENSG00000130396|P55196-1|AFDN', 'nc|ENSG00000130396|P55196|AFDN', 'nc|ENSG00000130396|P55196-5|AFDN'] 15781 4261 EDFMKLYNHLE True NCI_RA007_Epitope_Rep2 1437.6598515098497 1437.6582149037902 21.212 3 -0.8724115389294071 0.26390612659370416 1.0 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM'] 37248 16868 GVVFWYKRRV True NCI_RA007_Epitope_Rep3 1308.7455105998397 1308.7444099358602 74.224 2 -0.8724124560885801 0.26390612659370416 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 125814 17366 VNLPPELRRQ True NCI_RA007_Epitope_Rep4 1220.69895433024 1220.6978499358602 75.207 2 -0.8724387801360015 0.2639165080036669 1.0 ['ENSG00000240505|ENST00000261652|TNFRSF13B', 'nc|ENSG00000240505|O14836-3|TNFRSF13B', 'ENST00000581616.2_1_17:16844708-16875389:-|nuORF', 'nc|ENSG00000240505|O14836-2|TNFRSF13B', 'ENST00000582931.5_1_17:16836228-16875389:-|nuORF'] 63103 5664 LNNEKQWINK True NCI_RA007_Epitope_Rep4 1285.67788453249 1285.6762349037901 28.393 3 -0.8724911359991224 0.2639268891208078 1.0 ['HP|p.K345Sfs*31|2|0.17|ENSG00000257017|chr16:72060701-72060701|T/-|frameshift_variant', 'ENSG00000257017|ENST00000355906|HP', 'nc|ENSG00000257017|P00738-2|HP'] 111941 12546 TLSASPHTV True PC9_epitope_Rep5 911.4712458111901 911.47014993586 53.257 2 -0.8725444136088778 0.26395137292509907 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.G241Efs*36|1|0.52|ENSG00000126259|chr19:35860343-35860343|G/-|frameshift_variant', 'KIRREL2|p.V229L|1|0.2|ENSG00000126259|chr19:35860308-35860308|G/C|missense_variant'] 11463 2766 DFWFLNNVGP True H1975_Epitope_Rep2 1207.56620882519 1207.5651099358602 14.668 2 -0.8726512254488038 0.26397879031461974 1.0 ['ENSG00000157856|ENST00000288710|DRC1'] 73697 17830 NGRRRPRA True NCI_RA007_Epitope_Rep2 981.5692775733698 981.56818993586 74.094 2 -0.8726552755248739 0.26397879031461974 1.0 ['ENST00000464986.5_1_2:3597961-3599836:-|nuORF', 'ENSG00000171865|ENST00000315212|RNASEH1'] 45949 15420 ISSKILPLD True PC9_epitope_Rep4 984.5855472874399 984.58444993586 67.244 2 -0.8726574775963901 0.26397879031461974 1.0 ['ENSG00000171798|ENST00000304613|KNDC1'] 67756 8837 LTGTCETEAYW True NCI_RA007_Epitope_Rep4 1272.5332540144 1272.5321499358602 40.801 2 -0.872665305305113 0.26397879031461974 1.0 ['ENSG00000221963|ENST00000409652|APOL6'] 64518 17045 LRCRCCWWRRR True H1975_Epitope_Rep3 1592.7863640326798 1592.78526993586 71.164 2 -0.8728243769521076 0.2640240291056773 1.0 ['ENST00000265594.8_1_3:182812367-182817305:-|nuORF'] 109042 7038 TEYSLREVP True H1975_Epitope_Rep3 1092.54513902744 1092.5440499358601 32.036 2 -0.8728306151117632 0.2640240291056773 1.0 ['ENSG00000146350|ENST00000398212|TBC1D32', 'nc|ENSG00000146350|Q96NH3-4|TBC1D32', 'ENST00000398197.6_1_6:121482190-121544486:-|nuORF', 'ENST00000464622.5_1_6:121513684-121545514:-|nuORF'] 30986 11843 GATGSCQK True NCI_RA007_Epitope_Rep1 750.33303808622 750.3324849679301 50.048 1 -0.8728749103391831 0.2640240291056773 1.0 ['ENST00000399423.8_1_14:24711613-24711790:-|nuORF'] 78596 16310 PDSFNIPGSS True PC9_epitope_Rep2 1019.45598966987 1019.45488993586 67.982 2 -0.8729657913213574 0.26404850877811464 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 102243 7107 SPSVLPPSL True PC9_epitope_Rep4 895.50148331031 895.50038993586 34.606 2 -0.872994301292798 0.2640514396909106 1.0 ['ENST00000434116.6_1_15:65916409-65944223:+|nuORF', 'nc|ENSG00000074621|O60721-3|SLC24A1', 'nc|ENSG00000074621|O60721-2|SLC24A1', 'ENSG00000074621|ENST00000261892|SLC24A1'] 73343 5891 NEMDIRNFQP True NCI_RA007_Epitope_Rep2 1262.57137085862 1262.57026993586 27.53 2 -0.8730019031378391 0.2640514396909106 1.0 ['nc|ENSG00000189180|Q06730|ZNF33A', 'ENSG00000189180|ENST00000432900|ZNF33A', 'nc|ENSG00000189180|Q06730-3|ZNF33A'] 18350 17923 EIWLIRTYWDF True PC9_epitope_Rep1 1540.77145056416 1540.7703499358602 73.733 2 -0.8730053514391775 0.2640514396909106 1.0 ['UGT2A3|p.Q331Tfs*23|1|0.24|ENSG00000135220|chr4:68932633-68932634|-/T|frameshift_variant', 'ENSG00000135220|ENST00000251566|UGT2A3', 'nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'chr4:69599394-69638899|138|17.34|0.08|7.68|-|ENST00000514019|UGT2A2,UGT2A2', 'chr4:69599394-69646930|175|34.62|0.22|7.32|-|ENST00000512704|UGT2A2,UGT2A1', 'nc|ENSG00000173610|P0DTE4-1|UGT2A1', 'ENSG00000173610|ENST00000286604|UGT2A1', 'nc|ENSG00000271271|P0DTE5-2|UGT2A2', 'chr4:69595249-69599246|192|39.89|0.81|5.62|-|ENST00000604021|UGT2A2,UGT2A2', 'ENSG00000271271|ENST00000604629|UGT2A2'] 46303 16458 ITENREMLP True PC9_epitope_Rep4 1101.54884450889 1101.54774993586 71.275 2 -0.8731276467598224 0.2640900181897658 1.0 ['ENSG00000164303|ENST00000296741|ENPP6'] 17945 12813 EIEQYSVRATY True H1975_Epitope_Rep3 1357.65139500113 1357.6502899358602 54.504 2 -0.8731932051694687 0.2641003948110547 1.0 ['APOB|p.S1017R|1|0.18|ENSG00000084674|chr2:21019062-21019062|G/T|missense_variant'] 37688 6332 HALNEVDPG True PC9_epitope_Rep3 950.4457593393399 950.44466993586 29.385 2 -0.8732115057605842 0.26410704717859057 1.0 ['ENSG00000142207|ENST00000382751|URB1'] 32356 10376 GGDEDFYT True PC9_epitope_Rep5 902.3293921744199 902.32828993586 44.896 2 -0.8732395902798459 0.26410704717859057 1.0 ['CON__Q28065'] 91437 24435 RNLRVHRV True H1975_Epitope_Rep1 1048.6366288572 1048.6355299358602 101.3 2 -0.8732665858463118 0.26411742312084935 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 75055 25854 NMERPVRYI True PC9_epitope_Rep4 1176.6073624445198 1176.60571490379 109.1 3 -0.8733414739522241 0.2641307259576748 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 78909 4703 PEYVHMYTQR True H1975_Epitope_Rep1 1322.60775636734 1322.60611490379 23.132 3 -0.8733524587891892 0.2641307259576748 1.0 ['ENSG00000166801|ENST00000675163|FAM111A'] 5303 18944 ALSEVKLFI True PC9_epitope_Rep6 1018.6062827320198 1018.60518993586 85.514 2 -0.8733599656783266 0.2641307259576748 1.0 ['ENSG00000180432|ENST00000316161|CYP8B1'] 17080 10527 EGQPGKVIEV True PC9_epitope_Rep3 1054.56587447202 1054.56476993586 45.432 2 -0.8733646620596752 0.2641307259576748 1.0 ['nc|nan|Q9H0W9-4|C11orf54', 'nc|nan|Q9H0W9-2|C11orf54', 'ENSG00000182919|ENST00000354421|C11orf54'] 86469 6476 QQTEIYVVP True NCI_RA007_Epitope_Rep4 1075.5549754351498 1075.5538699358601 31.507 2 -0.8733878988069276 0.2641365795891898 1.0 ['ENST00000489116.1_1_6:28415047-28415581:+|nuORF', 'nc|ENSG00000166260|Q9Y6N1-2|COX11', 'ENSG00000166260|ENST00000299335|COX11'] 61002 5504 LLALHSAA True PC9_epitope_Rep4 794.4650382319401 794.46394993586 27.931 2 -0.8734548015868391 0.2641365795891898 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 25168 9515 FDSSYGEHPKR True NCI_RA007_Epitope_Rep1 1321.6051135150499 1321.6040099358602 41.005 2 -0.8734876706132497 0.2641365795891898 1.0 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 74712 4760 NLKYFEYIMAK True NCI_RA007_Epitope_Rep4 1418.72680887086 1418.72515490379 24.742 3 -0.8736364248759549 0.2641365795891898 1.0 ['nc|ENSG00000122884|P13674-3|P4HA1', 'nc|ENSG00000122884|P13674-2|P4HA1', 'ENSG00000122884|ENST00000394890|P4HA1'] 121445 20389 VGIISIPLK True PC9_epitope_Rep3 938.6164534929 938.61534993586 83.677 2 -0.8736498778364665 0.2641365795891898 1.0 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant', 'RYR3|p.V3486Lfs*23|1|0.16|ENSG00000198838|chr15:33813536-33813560|GTGGTGGCCTGTTTCAGGATGGCCC/-|frameshift_variant'] 116097 8487 TVSIATMPTHS True NCI_RA007_Epitope_Rep2 1143.55940919259 1143.55830993586 37.656 2 -0.873652282674042 0.2641365795891898 1.0 ['ENSG00000134317|ENST00000324907|GRHL1', 'nc|ENSG00000134317|Q9NZI5-3|GRHL1', 'ENST00000497403.5_1_2:10101229-10104576:+|nuORF'] 136853 19274 YIVSGSLSVWA True NCI_RA007_Epitope_Rep1 1180.61282466444 1180.61172993586 79.129 2 -0.873727528551311 0.26417142454359627 1.0 ['ENSG00000214782|ENST00000529108|MS4A18'] 104533 5513 SSSCTLFKSL True PC9_epitope_Rep5 1071.52704643515 1071.5259499358601 26.214 2 -0.873728763562475 0.26417142454359627 1.0 ['ENST00000244745.3_2_6:21594004-21594211:+|nuORF'] 82642 22917 PVLLMLFVYCT True NCI_RA007_Epitope_Rep1 1297.68143890157 1297.68034993586 94.083 2 -0.8737763925159867 0.26418844624883703 1.0 ['ENSG00000169575|ENST00000403807|VPREB1'] 139839 9503 YVDIAIPC[Carbamidomethyl]NNK True H1975_Epitope_Rep3 1305.63872242188 1305.63762993586 41.558 2 -0.8737777106923853 0.26418844624883703 1.0 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF', 'ENST00000467439.1_1_4:81082717-81082801:+|nuORF', 'ENST00000416785.1_1_6:28699967-28700618:+|nuORF'] 46281 11660 ITEDKINALVK True NCI_RA007_Epitope_Rep2 1242.71835236214 1242.71724993586 49.948 2 -0.8737972849283636 0.26418844624883703 1.0 ['ENST00000470649.1_2_17:15947979-15948198:+|nuORF'] 119551 7385 VERERELP True NCI_RA007_Epitope_Rep5 1026.5458077337798 1026.54470993586 35.084 2 -0.8738227117829253 0.26421291532161434 1.0 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 24890 3272 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 16.618 2 -0.8738730580694233 0.2642514801240485 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18342 8732 EIWEKTM[Oxidation]WPPT True H1975_Epitope_Rep1 1432.6696882979998 1432.6685899358602 38.516 2 -0.8738960629423611 0.264254401420859 1.0 ['ENST00000306562.7_1_1:249142917-249143094:+|nuORF'] 93540 17436 RSPRGILG True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 73.851 2 -0.8739028003333581 0.264254401420859 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 46691 14975 ITWMNVEIV True PC9_epitope_Rep2 1103.5685173243098 1103.56740993586 62.858 2 -0.8739046751075231 0.264254401420859 1.0 ['ENST00000276654.9_1_8:105510067-105510277:-|nuORF'] 90068 9238 RGLVGYRGT True PC9_epitope_Rep1 977.54066278369 977.53956993586 40.386 2 -0.8740657538894583 0.26430252716740193 1.0 ['ENST00000507944.5_1_3:98241389-98241692:-|nuORF'] 84378 9925 QGARCGGK True H1975_Epitope_Rep3 775.3759059577098 775.3753549679301 43.209 1 -0.8740688959849777 0.26430252716740193 1.0 ['nc|ENSG00000113742|Q17RY0-2|CPEB4', 'ENSG00000113742|ENST00000265085|CPEB4', 'nc|ENSG00000113742|Q17RY0-3|CPEB4', 'nc|ENSG00000137449|Q7Z5Q1-7|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-5|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-4|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-6|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1-3|CPEB2', 'nc|ENSG00000137449|Q7Z5Q1|CPEB2'] 24989 13740 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 60.077 2 -0.8740960643813681 0.26430252716740193 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 56600 10415 LDWWEPELGV True H1975_Epitope_Rep1 1242.5920892198599 1242.59098993586 45.013 2 -0.8741043137004695 0.26430252716740193 1.0 ['ENST00000395011.5_1_10:72060408-72060609:-|nuORF'] 122249 15927 VGRRAAKA True NCI_RA007_Epitope_Rep4 827.5089687325898 827.5084249679301 69.131 1 -0.8741222477752953 0.26430252716740193 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 62887 7808 LMRQCWRDRPY True PC9_epitope_Rep5 1522.7285572897 1522.72690490379 34.978 3 -0.8741385547200823 0.26430252716740193 1.0 ['ENSG00000066056|ENST00000372476|TIE1'] 125246 15425 VLRAPHNPAP True PC9_epitope_Rep1 1070.5985120129799 1070.59740993586 64.151 2 -0.8742137138589468 0.2643091711180956 1.0 ['ENST00000339867.4_1_6:34544300-34544348:-|nuORF'] 65652 11478 LSGSSFNWPY True H1975_Epitope_Rep1 1156.5189242796 1156.5178299358602 49.134 2 -0.8742252464818896 0.2643091711180956 1.0 ['ENST00000506162.1_1_5:92927828-92929545:+|nuORF', 'nc|ENSG00000185551|P24468-3|NR2F2', 'nc|ENSG00000185551|P24468-2|NR2F2', 'ENSG00000185551|ENST00000394166|NR2F2', 'ENSG00000175745|ENST00000327111|NR2F1'] 129976 19985 VTPAPHEPV True PC9_epitope_Rep1 945.49198125577 945.49088993586 81.697 2 -0.8742514302041027 0.2643299085309994 1.0 ['nc|ENSG00000102858|O60291-3|MGRN1', 'ENSG00000102858|ENST00000262370|MGRN1', 'nc|ENSG00000102858|O60291-4|MGRN1', 'nc|ENSG00000102858|O60291|MGRN1', 'MGRN1-C16orf96|1|fusion', 'MGRN1-C16orf96|2|fusion'] 139566 18275 YTNFTLEKNF True PC9_epitope_Rep3 1275.6135529404298 1275.61244993586 75.501 2 -0.874258043255294 0.2643299085309994 1.0 ['ENSG00000142173|ENST00000300527|COL6A2', 'nc|ENSG00000142173|P12110-3|COL6A2', 'nc|ENSG00000142173|P12110-2|COL6A2'] 45338 10045 ISDDIPLQLVT True H1975_Epitope_Rep3 1212.66016877968 1212.65906993586 43.674 2 -0.8742970221592063 0.2643365513353534 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant'] 131441 18262 VVTSVKTRVS True NCI_RA007_Epitope_Rep4 1074.6397081186199 1074.6386099358601 78.994 2 -0.8743050873930256 0.2643365513353534 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 64816 5999 LSAELFHLSG True NCI_RA007_Epitope_Rep5 1072.5553097883198 1072.5542099358602 29.758 2 -0.874355225918361 0.26433704382133294 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 34269 7238 GPLGPDEK True PC9_epitope_Rep2 811.40758292547 811.40648993586 33.23 2 -0.8743838631325239 0.26433704382133294 1.0 ['CECR2|p.E1074Gfs*15|1|0.14|ENSG00000099954|chr22:17548448-17548461|AGAACGGAGTCATT/-|frameshift_variant', 'ENSG00000099954|ENST00000262608|CECR2', 'nc|ENSG00000099954|Q9BXF3|CECR2'] 44339 13890 IMKARYKTL True PC9_epitope_Rep5 1122.65833538822 1122.65668490379 58.448 3 -0.874388288215753 0.26433704382133294 1.0 ['nc|ENSG00000100890|O15091-2|PRORP', 'ENSG00000100890|ENST00000534898|PRORP', 'nc|ENSG00000100890|O15091-4|PRORP'] 22519 6970 ETKVPEEIPP True H1975_Epitope_Rep1 1137.5917548666898 1137.59064993586 31.852 2 -0.8743956402969166 0.26433704382133294 1.0 ['nc|ENSG00000188152|Q5VZR2-2|NUTM2G', 'nc|ENSG00000188199|A6NNL0-2|NUTM2B', 'nc|ENSG00000184923|Q8IVF1-2|NUTM2A', 'ENSG00000188152|ENST00000372322|NUTM2G', 'ENSG00000130950|ENST00000253262|NUTM2F', 'ENSG00000214562|ENST00000381697|NUTM2D', 'ENSG00000228570|ENST00000429984|NUTM2E', 'ENSG00000188199|ENST00000429828|NUTM2B', 'ENSG00000184923|ENST00000381707|NUTM2A'] 115396 20703 TVETLEKENP True PC9_epitope_Rep3 1158.5768330785397 1158.5757299358602 84.909 2 -0.8744008314699601 0.26433704382133294 1.0 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF'] 78462 9690 PDAPPDTTV True H1975_Epitope_Rep2 911.4236269124301 911.42252993586 42.254 2 -0.8744086972390692 0.26433704382133294 1.0 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 32767 13213 GIAQGQMTVL True PC9_epitope_Rep5 1016.5324661687599 1016.53136993586 55.831 2 -0.8744147263890711 0.26433704382133294 1.0 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2'] 119140 11991 VEILQEREYRL True H1975_Epitope_Rep3 1446.7830778770199 1446.78198993586 51.282 2 -0.8744463077582367 0.26433704382133294 1.0 ['nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'SMARCA2|p.L456Ffs*51|1|0.12|ENSG00000080503|chr9:2058311-2058311|G/-|frameshift_variant', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 18565 12903 EKVVNLEQSY True PC9_epitope_Rep5 1207.60846755999 1207.60736993586 54.643 2 -0.8744488148950833 0.26433704382133294 1.0 ['ERCC6L2|p.Q1101L|1|0.4|ENSG00000182150|chr9:95973053-95973053|A/T|missense_variant'] 11606 5744 DHAIKVFQG True PC9_epitope_Rep3 1013.5294293936499 1013.52832993586 27.166 2 -0.8744648728411183 0.26433704382133294 1.0 ['nc|ENSG00000164304|Q8TC20-4|CAGE1'] 30983 17601 GATFSGYLVY True PC9_epitope_Rep5 1076.5178616504397 1076.51676993586 72.71 2 -0.8744790080343253 0.26433704382133294 1.0 ['ENSG00000172247|ENST00000302514|C1QTNF4'] 93534 16355 RSPRGILG True NCI_RA007_Epitope_Rep3 854.5086343794198 854.50752993586 72.044 2 -0.8745148164078028 0.26433704382133294 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 118441 17811 VDPSSNLYY True H1975_Epitope_Rep2 1056.47639076128 1056.47528993586 73.831 2 -0.8745231339280943 0.26433704382133294 1.0 ['nc|ENSG00000144191|Q16281-2|CNGA3', 'ENSG00000144191|ENST00000272602|CNGA3', 'nc|ENSG00000144191|Q16281-3|CNGA3'] 22357 5312 ETELYDYYYYK True NCI_RA007_Epitope_Rep5 1548.66604200576 1548.66439490379 27.126 3 -0.8745431585126666 0.26433704382133294 1.0 ['COL24A1|p.E476K|1|0.55|ENSG00000171502|chr1:86124910-86124910|C/T|missense_variant'] 24931 2797 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 15.199 2 -0.8745772457624585 0.26433704382133294 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 20389 15116 EPLGVIPVV True H1975_Epitope_Rep3 921.5535188831699 921.55297496793 63.543 1 -0.8746200428710714 0.2643710550045086 1.0 ['ENST00000359866.8_1_19:17431114-17431327:+|nuORF'] 111397 4993 TLKDTEQYERE True PC9_epitope_Rep5 1410.66268796082 1410.66103490379 24.238 3 -0.8746708932422814 0.2643710550045086 1.0 ['ENSG00000136045|ENST00000412830|PWP1'] 138448 6775 YREWRRYYEVW True NCI_RA007_Epitope_Rep1 1704.8161093408 1704.8144549037902 30.361 3 -0.8747005894679158 0.2643710550045086 1.0 ['ENSG00000118017|ENST00000236709|A4GNT'] 45757 6169 ISNHLSFDQTK True NCI_RA007_Epitope_Rep1 1288.6411646706 1288.64006993586 28.032 2 -0.8747011586724125 0.2643710550045086 1.0 ['ENSG00000177483|ENST00000316997|RBM44'] 31065 6086 GAVTLGIG True NCI_RA007_Epitope_Rep5 686.3962899657799 686.39574496793 30.091 1 -0.8747038212498153 0.2643710550045086 1.0 ['ENSG00000204006|ENST00000371759|C1orf185'] 101522 13396 SPAIQEMV True PC9_epitope_Rep2 873.42660411789 873.4260549679301 56.809 1 -0.8747081434205578 0.2643710550045086 1.0 ['nc|ENSG00000100842|O43281-3|EFS', 'nc|ENSG00000100842|O43281-2|EFS', 'ENSG00000100842|ENST00000216733|EFS'] 120489 13761 VFVRPPNGT True PC9_epitope_Rep1 985.5345147740899 985.53340993586 57.776 2 -0.8747562743483633 0.26437769449688636 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-9|CDH23', 'nc|ENSG00000107736|Q9H251-7|CDH23'] 40712 9171 HTRIYNYEKP True NCI_RA007_Epitope_Rep2 1319.6622344683497 1319.6611299358601 40.281 2 -0.8747574746584563 0.26437769449688636 1.0 ['ZNF791|p.H546Y|1|0.25|ENSG00000173875|chr19:12629165-12629165|C/T|missense_variant'] 128571 22287 VSITSSLAW True PC9_epitope_Rep1 962.50729696674 962.50618993586 90.538 2 -0.8748601998125995 0.2644265990419837 1.0 ['ENSG00000092330|ENST00000267415|TINF2', 'nc|ENSG00000092330|Q9BSI4-2|TINF2'] 82472 18196 PVDTRERGLK True PC9_epitope_Rep6 1169.6516697846498 1169.6500349037901 82.632 3 -0.8748618368801431 0.2644265990419837 1.0 ['ENSG00000274588|ENST00000611977|DGKK'] 84836 7750 QHLQWLSDSR True H1975_Epitope_Rep2 1268.6261833127999 1268.6250899358602 34.764 2 -0.874863950115627 0.26443696200391653 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14'] 44227 6802 ILSQYITFVK True H1975_Epitope_Rep3 1210.6961603655798 1210.6950699358601 31.117 2 -0.8748782320818582 0.2644435991716326 1.0 ['ENSG00000143179|ENST00000367879|UCK2', 'ENST00000463772.5_1_1:165867222-165877057:+|nuORF', 'ENST00000479872.5_1_1:165872390-165877057:+|nuORF', 'nc|ENSG00000143179|Q9BZX2-2|UCK2'] 56233 13738 LDPTAGSLSV True PC9_epitope_Rep5 958.49712620586 958.49602993586 57.866 2 -0.8748885632570174 0.2644435991716326 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549', 'KIAA1549|p.A1010Gfs*12|1|0.57|ENSG00000122778|chr7:138911264-138911265|-/T|frameshift_variant'] 60590 12611 LISDSNPL True PC9_epitope_Rep1 857.44944773745 857.44834993586 53.376 2 -0.8749357050301304 0.26448213681956495 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 67080 20856 LTCNVWGDP True PC9_epitope_Rep1 1003.4433168111899 1003.4427749679301 85.048 1 -0.874965253809137 0.2644916818098579 1.0 ['nc|ENSG00000101605|P52179-2|MYOM1', 'ENSG00000101605|ENST00000356443|MYOM1'] 43696 16339 IIPPNFQEAF True PC9_epitope_Rep3 1174.60225998074 1174.60060490379 67.982 3 -0.8749652633984848 0.2644916818098579 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 16766 10864 EFDLNNEGEI True PC9_epitope_Rep3 1178.5091474415399 1178.50750490379 46.764 3 -0.8749674478557073 0.2644916818098579 1.0 ['nc|ENSG00000126878|Q9BQI0-4|AIF1L', 'ENSG00000126878|ENST00000247291|AIF1L', 'nc|ENSG00000126878|Q9BQI0-2|AIF1L'] 118926 15974 VEERDFIMP True PC9_epitope_Rep2 1134.5379454720198 1134.5368499358601 66.697 2 -0.8750038330871606 0.2644916818098579 1.0 ['ENSG00000180902|ENST00000321264|D2HGDH', 'ENST00000436747.5_1_2:242681986-242688401:+|nuORF', 'nc|ENSG00000180902|Q8N465-2|D2HGDH', 'nc|ENSG00000180902|Q8N465-3|D2HGDH'] 123753 14925 VIRRLRERGEP True PC9_epitope_Rep2 1379.8109643907096 1379.8098699358602 62.67 2 -0.8750203343846634 0.2644916818098579 1.0 ['ENSG00000165630|ENST00000378572|PRPF18'] 59300 4647 LGHGDNTTQLK True H1975_Epitope_Rep3 1182.59929985862 1182.59820993586 22.997 2 -0.8750288091808888 0.26449831668803087 1.0 ['ENSG00000128731|ENST00000261609|HERC2'] 111770 6917 TLQPTPGLPSP True H1975_Epitope_Rep1 1106.5971746003 1106.5960699358602 31.648 2 -0.8750338069463334 0.26449831668803087 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 15842 5835 EDLFCYWEKLV True NCI_RA007_Epitope_Rep1 1443.67443894483 1443.6733499358602 26.75 2 -0.8751045435819683 0.26450495119237105 1.0 ['ENSG00000170613|ENST00000302938|GARIN3'] 16585 8692 EERKSHKIP True H1975_Epitope_Rep2 1122.61455599994 1122.6134499358602 38.395 2 -0.8751268598476324 0.26450495119237105 1.0 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'WHSC1L1-DDHD2|2|fusion', 'nc|ENSG00000147548|Q9BZ95-2|NSD3', 'ENST00000587110.1_1_17:41796950-41797316:-|nuORF', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion', 'WHSC1L1-C15orf55|1|fusion', 'WHSC1L1-DDHD2|1|fusion'] 83615 8766 QDVFRNLSHLP True H1975_Epitope_Rep1 1324.6887835693599 1324.6876899358601 38.648 2 -0.8751671760498032 0.2645115853229101 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB', 'nc|ENSG00000111670|Q3T906-2|GNPTAB'] 63310 14025 LPDCKLYYKAT True NCI_RA007_Epitope_Rep1 1313.66895964157 1313.6678699358602 58.582 2 -0.8751934699528171 0.2645115853229101 1.0 ['L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|128|3|sense'] 128057 24712 VRRLLGCL True PC9_epitope_Rep2 928.5640410805598 928.5634949679301 100.74 1 -0.8753746370661446 0.2645604743862417 1.0 ['ENSG00000168394|ENST00000354258|TAP1', 'nc|ENSG00000168394|Q03518-2|TAP1'] 119363 4044 VENLCSYKI True NCI_RA007_Epitope_Rep2 1067.53213181559 1067.53102993586 20.369 2 -0.8753841017040149 0.2645604743862417 1.0 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 38630 22240 HHKITKLVL True NCI_RA007_Epitope_Rep5 1087.68659874139 1087.6855099358602 92.693 2 -0.8754299026488971 0.2645849178850109 1.0 ['ASB9|p.E285G|1|0.29|ENSG00000102048|chrX:15244537-15244537|T/C|missense_variant', 'ASB9|p.P284S|1|0.26|ENSG00000102048|chrX:15244541-15244541|G/A|missense_variant', 'ENST00000380483.7_1_X:15262630-15266835:-|nuORF', 'ENST00000473862.5_1_X:15262630-15288056:-|nuORF', 'ENSG00000102048|ENST00000380488|ASB9'] 131446 19158 VVTSVKTRVS True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 80.562 2 -0.8754332672720905 0.2646056338028169 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 127430 22772 VQRRRPRQTV True PC9_epitope_Rep4 1294.7694339318998 1294.76832993586 95.811 2 -0.8754352105767673 0.2646056338028169 1.0 ['ENST00000465739.5_3_3:158465490-158465601:+|nuORF'] 98135 13879 SICCPHPSF True PC9_epitope_Rep5 989.40990850793 989.40880993586 58.405 2 -0.8755010926239432 0.2646263485535619 1.0 ['ENST00000391959.5_2_1:202549704-202549908:+|nuORF'] 92199 18788 RQGRLPRIP True H1975_Epitope_Rep2 1091.6675946323098 1091.66648993586 78.011 2 -0.8755177674601843 0.2646263485535619 1.0 ['IPO7-WEE1|1|fusion', 'nc|ENSG00000166483|P30291-2|WEE1', 'ENSG00000166483|ENST00000450114|WEE1'] 56804 12814 LEAVMEGA True PC9_epitope_Rep3 818.3844049527399 818.38330993586 54.311 2 -0.8756105696392904 0.2646367054913173 1.0 ['ENST00000368194.7_1_1:156905230-156905260:-|nuORF'] 38195 18298 HESWKYNMSF True PC9_epitope_Rep5 1327.56555720219 1327.56444993586 75.399 2 -0.8756606851483064 0.264661145850938 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant'] 93493 14363 RSIRKKRSP True NCI_RA007_Epitope_Rep5 1126.70470841702 1126.7036099358602 61.932 2 -0.8757006107609713 0.2646715020069009 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 55342 7967 LASERAITV True NCI_RA007_Epitope_Rep5 958.5447451046199 958.54364993586 37.333 2 -0.8757254013190232 0.2646818578711658 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000471603.6_1_16:2152958-2153681:-|nuORF', 'ENST00000532739.1_1_16:16465196-16470832:+|nuORF', 'ENST00000415938.7_1_16:2152605-2162466:-|nuORF', 'ENST00000480227.5_1_16:2149506-2153780:-|nuORF', 'ENST00000483731.5_1_16:2153201-2162466:-|nuORF'] 6026 5910 APLPHPGAA True PC9_epitope_Rep5 829.44463714053 829.44354993586 27.726 2 -0.8758028637812395 0.26470629656231076 1.0 ['nc|ENSG00000161202|Q92997-2|DVL3', 'ENSG00000161202|ENST00000313143|DVL3', 'ENST00000478247.1_1_3:183882805-183888540:+|nuORF'] 18225 7508 EIRSYEDP True H1975_Epitope_Rep2 1007.4559896698698 1007.45488993586 33.829 2 -0.8758639964805243 0.26472700643580394 1.0 ['ENSG00000114735|ENST00000232854|HEMK1', 'ENST00000448997.5_1_3:50608680-50617422:+|nuORF'] 111698 12707 TLPPTNVTL True NCI_RA007_Epitope_Rep5 954.53859709502 954.53750993586 55.541 2 -0.875874252301129 0.26472700643580394 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 65269 5062 LSEHLYPIR True NCI_RA007_Epitope_Rep3 1126.61349337078 1126.6118549037901 26.905 3 -0.8759318180684665 0.26473736093507955 1.0 ['ENST00000357103.4_1_12:1895563-1895707:+|nuORF'] 82910 5376 PWATVNRLQ True NCI_RA007_Epitope_Rep3 1083.58252759567 1083.5814299358601 28.152 2 -0.8759747176976478 0.26477215118571507 1.0 ['ENST00000254508.6_1_3:13358488-13358665:-|nuORF'] 19085 12869 ELHNELVVR True PC9_epitope_Rep6 1107.6036569630699 1107.60254993586 61.021 2 -0.8760011908993668 0.26477215118571507 1.0 ['ENST00000556438.6_1_14:55603944-55604055:+|nuORF'] 99654 12180 SLFYWMYVWTR True H1975_Epitope_Rep1 1550.7380422608999 1550.7369499358601 51.869 2 -0.8760313201963839 0.2647965865404926 1.0 ['SAYSD1|p.G137W|1|0.21|ENSG00000112167|chr6:39105575-39105575|C/A|missense_variant'] 236 19480 AAGAPNLVLAA True PC9_epitope_Rep5 966.5498304850599 966.54872993586 79.983 2 -0.8760470345423408 0.2648032105893121 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 129586 9888 VTGMELEFKR True NCI_RA007_Epitope_Rep2 1208.6223438023198 1208.62124993586 43.09 2 -0.8760961824321363 0.2648032105893121 1.0 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD', 'nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS', 'nc|ENSG00000105426|Q13332-5|PTPRS', 'nc|ENSG00000105426|Q13332-7|PTPRS', 'ENST00000588552.5_1_19:5159112-5286160:-|nuORF'] 55983 9302 LDIGFGRGQE True PC9_epitope_Rep3 1090.54072235334 1090.5396299358601 40.72 2 -0.8761283036286317 0.2648661588070462 1.0 ['ENST00000508913.5_1_5:43043449-43044931:+|nuORF'] 62856 20178 LMMRKLKKKH True NCI_RA007_Epitope_Rep1 1311.7995374019897 1311.7978949037902 82.694 3 -0.8761810410347917 0.2648661588070462 1.0 ['ENST00000429734.1_1_10:97949420-97949504:-|nuORF'] 58233 9355 LESVNDAQKAK True NCI_RA007_Epitope_Rep5 1201.63026563373 1201.62916993586 42.626 2 -0.8762545618739376 0.2648765101805176 1.0 ['ENST00000440689.1_1_1:111494904-111495009:+|nuORF'] 122354 11694 VGSAWAAP True PC9_epitope_Rep6 757.3758888743699 757.37478993586 56.114 2 -0.8762646699279117 0.2648860228376723 1.0 ['ENST00000496281.1_1_20:62323608-62327208:+|nuORF'] 83411 6072 QAYDRQKNP True NCI_RA007_Epitope_Rep2 1118.54687036294 1118.54576993586 28.224 2 -0.8762904116852028 0.2648860228376723 1.0 ['nc|ENSG00000275410|P35680-3|HNF1B', 'nc|ENSG00000275410|P35680-4|HNF1B', 'nc|ENSG00000275410|P35680-2|HNF1B', 'ENSG00000275410|ENST00000617811|HNF1B'] 78463 6037 PDAQTVAP True PC9_epitope_Rep5 797.3919328613299 797.39082993586 28.213 2 -0.8762912667230603 0.2648860228376723 1.0 ['ENSG00000162745|ENST00000294794|OLFML2B'] 32190 12190 GFDLDIKGW True NCI_RA007_Epitope_Rep2 1049.51819600361 1049.5170899358602 52.014 2 -0.876305268685515 0.2648860228376723 1.0 ['ENSG00000147408|ENST00000692225|CSGALNACT1', 'nc|ENSG00000147408|Q8TDX6-2|CSGALNACT1', 'ENST00000397998.7_1_8:19263293-19315147:-|nuORF'] 57910 10244 LEQKWLIRMII True NCI_RA007_Epitope_Rep1 1441.8479270630498 1441.84627490379 43.858 3 -0.8763240721033378 0.2648860228376723 1.0 ['ENSG00000174405|ENST00000442234|LIG4', 'LIG4|p.G346Efs*10|1|0.4|ENSG00000174405|chr13:108210232-108210232|C/-|frameshift_variant'] 24353 13860 FADQHVEIP True PC9_epitope_Rep2 1054.5083595959 1054.5072699358602 58.596 2 -0.876332424495496 0.2648963730569948 1.0 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'nc|ENSG00000164347|Q969S9-5|GFM2', 'nc|ENSG00000164347|Q969S9-4|GFM2'] 128874 21790 VSSVPDVF True PC9_epitope_Rep1 848.42798401688 848.42688993586 88.638 2 -0.8763785023234024 0.2649170726212936 1.0 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 98475 13560 SIKRFRAR True NCI_RA007_Epitope_Rep2 1032.6304808475998 1032.6293899358602 57.384 2 -0.8764426893707183 0.2649170726212936 1.0 ['SPOCD1|p.R938Gfs*122|1|0.29|ENSG00000134668|chr1:31792365-31792365|G/-|frameshift_variant', 'nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-3|SPOCD1'] 3289 8175 AGGGQKSVL True PC9_epitope_Rep1 815.4501164437899 815.44900993586 36.277 2 -0.8764894956761883 0.26494150111929266 1.0 ['ENST00000292199.6_1_11:119039446-119042159:+|nuORF'] 31020 8084 GAVEVQVP True PC9_epitope_Rep3 797.4283183700499 797.4272299358599 36.07 2 -0.8764958731368786 0.26494811978206084 1.0 ['nc|ENSG00000103855|Q5ZPR3-3|CD276', 'nc|ENSG00000103855|Q5ZPR3-4|CD276', 'ENSG00000103855|ENST00000318443|CD276'] 97150 6111 SFFLCCWMR True PC9_epitope_Rep1 1191.50276334695 1191.50110490379 28.32 3 -0.8765013045036214 0.26494811978206084 1.0 ['ENST00000421422.1_2_20:39811252-39811324:-|nuORF'] 131440 18183 VVTSVKTRVS True NCI_RA007_Epitope_Rep3 1074.6397081186199 1074.6386099358601 79.642 2 -0.8765726383805794 0.26496881643226194 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 57601 9406 LELLDKIER True PC9_epitope_Rep1 1127.65502382959 1127.6533649037901 41.039 3 -0.8765744107094834 0.26496881643226194 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 122478 17925 VGSPVRQRRS True NCI_RA007_Epitope_Rep3 1140.64758746372 1140.64707496793 78.542 1 -0.8765910886225619 0.2649932424822615 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 118807 12134 VEEEKEPVP True PC9_epitope_Rep1 1054.51825557326 1054.51714993586 51.536 2 -0.8766022337942471 0.2649998592223442 1.0 ['ENSG00000175467|ENST00000312397|SART1'] 109166 5998 TFQDVAVDFT True PC9_epitope_Rep2 1141.5291546101298 1141.52804993586 28.459 2 -0.8766034116632622 0.2649998592223442 1.0 ['ENST00000590152.1_1_19:9267931-9272106:+|nuORF', 'nc|ENSG00000130803|Q96PQ6-2|ZNF317', 'ENSG00000130803|ENST00000247956|ZNF317', 'ZNF559|p.E17Q|1|0.07|ENSG00000188321|chr19:9339208-9339208|G/C|missense_variant', 'ENST00000482436.1_1_7:55980329-55991886:+|nuORF', 'ENST00000466630.5_1_7:55980329-55991094:+|nuORF', 'ENST00000419608.2_1_19:9251156-9268105:+|nuORF', 'ENSG00000117010|ENST00000372699|ZNF684', 'ENSG00000178665|ENST00000429591|ZNF713'] 114095 16018 TRRPPATA True NCI_RA007_Epitope_Rep3 868.4878989348399 868.48680993586 70.686 2 -0.8766874319885519 0.2650242838037587 1.0 ['CLEC14A|p.K422Nfs*43|1|0.35|ENSG00000176435|chr14:38254757-38254757|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 86124 3489 QPQSFSVGQPQ True H1975_Epitope_Rep3 1201.5727507576098 1201.57111490379 18.321 3 -0.8767034236007332 0.2650308993904585 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 39220 11990 HLHWRMRRHMK True NCI_RA007_Epitope_Rep1 1586.8299430968202 1586.82884993586 50.624 2 -0.8767229173438829 0.2650308993904585 1.0 ['ENST00000511465.1_1_4:185263030-185268908:-|nuORF'] 139163 4885 YSSKPQGKGQK True NCI_RA007_Epitope_Rep2 1206.6356853673399 1206.63458993586 23.624 2 -0.8767670459216877 0.2650544748177135 1.0 ['ENST00000512285.5_1_4:174219050-174219110:+|nuORF'] 121062 13293 VGFSAPSQLL True PC9_epitope_Rep2 1017.54949613189 1017.54838993586 56.409 2 -0.8767862226026771 0.2650544748177135 1.0 ['ENST00000261177.9_1_12:31145010-31145274:+|nuORF'] 22106 7900 ESVNKNKF True PC9_epitope_Rep1 964.4977949122 964.49668993586 35.212 2 -0.8767914423032732 0.2650544748177135 1.0 ['ENSG00000179912|ENST00000402412|R3HDM2', 'ENST00000551465.1_1_12:57691871-57704220:-|nuORF', 'nc|ENSG00000179912|Q9Y2K5|R3HDM2'] 126394 18429 VPLGRLELL True PC9_epitope_Rep4 1008.6331661861999 1008.63206993586 78.956 2 -0.8767926280968491 0.2650544748177135 1.0 ['ENSG00000136444|ENST00000258955|RSAD1', 'RSAD1|p.E353Q|1|0.22|ENSG00000136444|chr17:50483710-50483710|G/C|missense_variant'] 134175 18868 WRLCKTSL True PC9_epitope_Rep3 1005.54297128281 1005.54186993586 77.799 2 -0.8768023543259872 0.2650544748177135 1.0 ['nc|ENSG00000089123|Q9H6P5-3|TASP1', 'ENST00000480436.5_1_20:13415759-13610725:-|nuORF'] 85335 16040 QLAVQNLQKV True PC9_epitope_Rep5 1139.6662572196299 1139.6651699358601 66.686 2 -0.8768279338765917 0.2650573580125273 1.0 ['nc|ENSG00000197847|A6NK97|SLC22A20P'] 38409 24174 HGNILIVTIRE True PC9_epitope_Rep4 1263.72992010535 1263.7282649037902 101.46 3 -0.8768370772471726 0.2650573580125273 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 99757 15406 SLGLEMEHRFI True PC9_epitope_Rep5 1330.6703566239 1330.66870490379 64.268 3 -0.8769056181313332 0.2650573580125273 1.0 ['ENSG00000188647|ENST00000340434|PTAR1'] 83160 8567 PYSIMRSV True PC9_epitope_Rep5 951.48478770035 951.48368993586 37.895 2 -0.8769249682433092 0.265081778002984 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 59296 5036 LGGYYNKDNK True NCI_RA007_Epitope_Rep5 1170.5669371011797 1170.56530490379 26.073 3 -0.876979883031376 0.26509212211634553 1.0 ['ENSG00000082293|ENST00000620364|COL19A1'] 48422 20095 KEDYRRERWRK True NCI_RA007_Epitope_Rep2 1620.85970548828 1620.8586099358602 83.168 2 -0.8770311683606445 0.26510246593852044 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'CWF19L2|p.A394Ifs*9|1|0.27|ENSG00000152404|chr11:107429055-107429056|AA/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 24892 12219 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 51.497 2 -0.8770550274425778 0.26512688426297343 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 829 8051 ADDRTLKVWRT True H1975_Epitope_Rep1 1359.7258973540697 1359.72424490379 35.912 3 -0.8770962889096937 0.26514757005531236 1.0 ['HIRA|p.S197T|1|0.3|ENSG00000100084|chr22:19396851-19396851|C/G|missense_variant'] 100977 6538 SLSTPLGK True NCI_RA007_Epitope_Rep1 801.45961849833 801.45852993586 29.445 2 -0.8771115310918903 0.26514757005531236 1.0 ['ENST00000468045.5_1_2:27356354-27356477:-|nuORF'] 131439 18950 VVTSVKTRVS True NCI_RA007_Epitope_Rep2 1074.6397081186199 1074.6386099358601 78.559 2 -0.8772413223693821 0.26522455068751494 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 24862 14453 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 60.95 2 -0.8772464387954167 0.26522455068751494 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 93113 18311 RRRQRRRFSP True NCI_RA007_Epitope_Rep5 1413.8290144966895 1413.8279099358601 77.235 2 -0.8772657888420436 0.26523489177245474 1.0 ['ENST00000371953.7_1_10:89623465-89623600:+|nuORF'] 30167 16073 FYTDCIQQCS True PC9_epitope_Rep5 1206.4685455828599 1206.46744993586 66.814 2 -0.8773210289779027 0.26524149966223826 1.0 ['BOC-SIDT1|1|fusion', 'ENST00000481891.1_1_3:113334876-113338574:+|nuORF', 'nc|ENSG00000072858|Q9NXL6-2|SIDT1', 'ENSG00000072858|ENST00000264852|SIDT1'] 81846 8183 PSHLSELTSLK True NCI_RA007_Epitope_Rep2 1210.65575210558 1210.65464993586 36.466 2 -0.877341603018267 0.26524149966223826 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 71261 4013 MGLAEESK True NCI_RA007_Epitope_Rep2 863.40586867331 863.40476993586 20.248 2 -0.8773906749283652 0.26526591328088717 1.0 ['ENST00000406175.3_1_2:42515422-42522275:+|nuORF'] 20609 5848 EQERRRWQQRD True NCI_RA007_Epitope_Rep1 1585.7821834435697 1585.78054490379 26.799 3 -0.877409598392185 0.2652865928313092 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 79696 23428 PHLVQVRER True PC9_epitope_Rep1 1132.6465248345598 1132.6454299358602 94.9 2 -0.8774613699042378 0.2652865928313092 1.0 ['nc|ENSG00000136877|Q05932-3|FPGS', 'nc|ENSG00000136877|Q05932-2|FPGS', 'nc|ENSG00000136877|Q05932-4|FPGS', 'ENSG00000136877|ENST00000373247|FPGS', 'ENST00000488307.5_1_9:130565203-130570042:+|nuORF'] 16997 13369 EGILRELKEVA True NCI_RA007_Epitope_Rep2 1255.71360133487 1255.71250993586 56.642 2 -0.8774656598308758 0.26529693216999717 1.0 ['ENSG00000205363|ENST00000569673|INSYN1'] 111516 8627 TLLQPPRQPL True PC9_epitope_Rep1 1161.6869926642098 1161.6853349037901 38.022 3 -0.8775785068945253 0.26534948846765455 1.0 ['ENST00000438146.6_2_22:36156004-36156064:-|nuORF'] 126431 4497 VPLNWLRSRPY True PC9_epitope_Rep2 1399.77245362367 1399.7707949037901 22.655 3 -0.8776425302008265 0.2653598266302665 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 12198 3474 DINKNLWEKM True NCI_RA007_Epitope_Rep1 1289.64380752289 1289.64217490379 17.419 3 -0.8778421822800073 0.26545459662552945 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 22968 7300 EVIFPEDVSP True H1975_Epitope_Rep1 1130.54955570154 1130.5484499358602 33.09 2 -0.8778615859117168 0.2654640625879439 1.0 ['ENST00000475947.6_1_17:16343543-16344720:+|nuORF'] 97209 5407 SFKDENQEFQK True NCI_RA007_Epitope_Rep2 1398.6415585934199 1398.6404699358602 25.652 2 -0.8779122695702766 0.2654640625879439 1.0 ['ENSG00000183347|ENST00000370456|GBP6', 'nc|ENSG00000183347|Q6ZN66-2|GBP6'] 44017 13755 ILKDSDLLDRR True H1975_Epitope_Rep3 1342.75686312918 1342.7557699358601 58.208 2 -0.8779244388519349 0.2654640625879439 1.0 ['nc|ENSG00000147481|Q9NSN8-2|SNTG1', 'ENSG00000147481|ENST00000642720|SNTG1'] 63596 20919 LPLNCPPRV True PC9_epitope_Rep2 1007.55862134695 1007.55752993586 85.911 2 -0.8779317306819201 0.2654640625879439 1.0 ['NWD1|p.G1273Afs*12|2|0.44|ENSG00000188039|chr19:16807665-16807665|G/-|frameshift_variant', 'ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 64370 9249 LQPVQIQSL True NCI_RA007_Epitope_Rep4 1024.59169529704 1024.5905899358602 42.429 2 -0.8779486306822165 0.2654640625879439 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000561199.5_1_14:24652794-24657993:-|nuORF'] 101282 17303 SLWTEKLR True PC9_epitope_Rep1 1031.5763795860698 1031.5752899358602 71.371 2 -0.8779767574104629 0.2654743981201368 1.0 ['ENST00000450804.3_1_11:72281759-72282275:+|nuORF'] 59374 17584 LGLEEYAVFYP True PC9_epitope_Rep1 1299.6387050591097 1299.6376099358602 72.428 2 -0.8780917254634149 0.26553727962178664 1.0 ['nc|ENSG00000109680|Q8N5T2-2|TBC1D19', 'ENSG00000109680|ENST00000264866|TBC1D19', 'ENST00000502873.5_1_4:26585743-26755545:+|nuORF'] 74543 13142 NLAENISRV True PC9_epitope_Rep3 1014.54580773378 1014.5447099358599 55.58 2 -0.8781098705095154 0.26553727962178664 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL'] 49039 17746 KFIKEKSTL True PC9_epitope_Rep6 1092.6542955536 1092.6531899358602 80.895 2 -0.8782764281700406 0.26557487759581294 1.0 ['ENSG00000150773|ENST00000280350|PIH1D2'] 127887 15268 VRPGHGKG True NCI_RA007_Epitope_Rep4 806.4511195033 806.45002993586 66.373 2 -0.8782820063815954 0.26557487759581294 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 29983 6550 FYEGPPGAP True NCI_RA007_Epitope_Rep2 933.4232329896098 933.42212993586 30.09 2 -0.8783265487725149 0.26557487759581294 1.0 ['ENSG00000187942|ENST00000344642|LDLRAD2'] 125905 12979 VNTQSPPWWRI True NCI_RA007_Epitope_Rep1 1382.7095190139396 1382.70842993586 54.476 2 -0.8783292736991745 0.26557487759581294 1.0 ['ENST00000424041.1_1_20:36073469-36073910:-|nuORF'] 22787 12404 EVDFYIDK True H1975_Epitope_Rep3 1027.4862271689897 1027.4851299358602 52.901 2 -0.8783401529582174 0.26557487759581294 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF', 'EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100129|Q9Y262-2|EIF3L', 'ENSG00000100129|ENST00000652021|EIF3L', 'ENST00000457262.1_1_10:43062145-43062928:+|nuORF', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 100276 23254 SLLRRKLKRH True PC9_epitope_Rep1 1305.84695597661 1305.84584993586 94.232 2 -0.8785671307292524 0.26564148740098764 1.0 ['chr12:65951415-65963245|449|57.52|0.63|6.51|+|1|HMGA2,HMGA2|1'] 37650 20136 HAELFPAPIL True PC9_epitope_Rep4 1106.6124307416198 1106.61132993586 85.588 2 -0.8786063625959042 0.26565753193404984 1.0 ['nc|ENSG00000132185|Q7L513-4|FCRLA', 'nc|ENSG00000132185|Q7L513-11|FCRLA'] 19645 12286 ELRSGGAEVL True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 52.111 2 -0.8786177073010867 0.26565753193404984 1.0 ['CARMIL1|p.Q472E|1|0.29|ENSG00000079691|chr6:25509674-25509674|C/G|missense_variant'] 9276 14603 AVRGVMWWPS True H1975_Epitope_Rep3 1187.59098410439 1187.59047496793 61.539 1 -0.8786254700548437 0.26565753193404984 1.0 ['ENST00000584509.1_1_18:9322061-9334153:-|nuORF'] 135937 9596 YEWWFRWRLDR True H1975_Epitope_Rep3 1711.8371791385496 1711.8360899358602 41.924 2 -0.8786342716561263 0.26565753193404984 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 82008 9371 PSSTTPPIE True NCI_RA007_Epitope_Rep4 927.4549270407099 927.4543749679301 42.901 1 -0.8786637969135535 0.26565753193404984 1.0 ['ENSG00000159592|ENST00000355105|GPBP1L1'] 58467 11218 LEYGRSLED True NCI_RA007_Epitope_Rep3 1080.50875351872 1080.5076499358602 51.231 2 -0.8786688718612234 0.26565753193404984 1.0 ['ENST00000477632.5_1_2:70037634-70052644:+|nuORF'] 128065 17410 VRRLPGGG True NCI_RA007_Epitope_Rep3 810.4824196315798 810.48132993586 76.387 2 -0.8786798624116795 0.26565753193404984 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 63607 20652 LPLPPPQLSI True PC9_epitope_Rep5 1073.6484818971699 1073.64738993586 84.491 2 -0.8787286747634794 0.26566698082685086 1.0 ['ENST00000572585.5_1_17:909322-915797:-|nuORF'] 15617 8988 EAVQEITEY True H1975_Epitope_Rep3 1080.49752012868 1080.4969749679299 39.567 1 -0.878745614159973 0.26566698082685086 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG'] 127804 24621 VRLAGGGGG True PC9_epitope_Rep4 742.4085859849799 742.40803496793 103.2 1 -0.8788013292498024 0.26566698082685086 1.0 ['ENST00000366878.8_1_1:223536770-223537465:-|nuORF'] 3670 6660 AGRLKRKKLLK True NCI_RA007_Epitope_Rep2 1309.9034082235696 1309.90230993586 30.518 2 -0.8788070674186012 0.26566698082685086 1.0 ['ENSG00000111647|ENST00000279907|BLTP3B'] 29593 6543 FVKWSCFWVG True NCI_RA007_Epitope_Rep3 1257.60048615893 1257.59938993586 32.782 2 -0.8788271042887245 0.26566698082685086 1.0 ['ENST00000155926.8_1_2:12882275-12882671:+|nuORF'] 74474 18583 NKIYVFFQHAF True PC9_epitope_Rep4 1412.72410644892 1412.72245490379 79.555 3 -0.8788904661363718 0.2656913771275847 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 108625 6952 TEKETSLEETK True NCI_RA007_Epitope_Rep1 1293.6299908502099 1293.6288899358601 31.046 2 -0.8790290866228011 0.2657157727419786 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant'] 61308 13162 LLDYFLFLNR True NCI_RA007_Epitope_Rep2 1312.7179584393198 1312.7168699358601 55.83 2 -0.8790821261164683 0.2657261013897485 1.0 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1'] 57304 5475 LEGKLKGP True NCI_RA007_Epitope_Rep5 840.5069030439199 840.50580993586 27.747 2 -0.879114080236294 0.2657326919289954 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant', 'AHNAK|p.P895Qfs*5|1|0.29|ENSG00000124942|chr11:62531733-62531733|G/-|frameshift_variant'] 56737 10000 LEALLSSLPP True H1975_Epitope_Rep2 1038.5961119711399 1038.5950099358602 43.455 2 -0.8791320705170526 0.2657326919289954 1.0 ['ENST00000596279.1_1_19:17337742-17339154:+|nuORF', 'ENST00000594283.5_1_19:17337742-17339731:+|nuORF', 'ENSG00000099330|ENST00000215061|OCEL1'] 52917 23589 KRIHGREKRQA True PC9_epitope_Rep5 1377.8065477166099 1377.80544993586 95.716 2 -0.8791596154261819 0.2657355443970913 1.0 ['ENSG00000168702|ENST00000389484|LRP1B'] 13237 21105 DLTWLEWEELK True H1975_Epitope_Rep3 1460.71874628496 1460.7176499358602 88.154 2 -0.8791630530348282 0.2657355443970913 1.0 ['ENSG00000188674|ENST00000341287|C2orf80'] 118261 24242 VCNNGECL True PC9_epitope_Rep2 850.33132383406 850.33022993586 98.787 2 -0.8791673953791265 0.2657355443970913 1.0 ['ENSG00000069206|ENST00000175238|ADAM7'] 64131 7083 LQELDSWLP True NCI_RA007_Epitope_Rep1 1099.55497543515 1099.5538699358601 31.545 2 -0.8792455424074795 0.26574587189513066 1.0 ['ENST00000545225.5_2_17:40994478-40994634:+|nuORF'] 78891 12242 PEVDDDSI True PC9_epitope_Rep6 888.3712569864 888.37014993586 58.467 2 -0.8792797810082642 0.2657487236466435 1.0 ['ENSG00000139726|ENST00000280557|DENR'] 38951 2671 HIRRYTQMW True NCI_RA007_Epitope_Rep5 1289.64514493557 1289.64349490379 14.968 3 -0.879308179344077 0.2657487236466435 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.D506Nfs*15|2|0.25|ENSG00000129003|chr15:61991059-61991062|TATC/-|frameshift_variant'] 81498 15945 PQQPGLKPFL True PC9_epitope_Rep3 1123.6389798426299 1123.6373249037902 66.479 3 -0.8793218808238377 0.2657487236466435 1.0 ['nc|ENSG00000178522|Q9NP70-2|AMBN', 'ENSG00000178522|ENST00000322937|AMBN'] 116201 14630 TVTREKEE True PC9_epitope_Rep3 990.4981888350198 990.49708993586 61.407 2 -0.8793767671995354 0.2657693768195435 1.0 ['ENSG00000179071|ENST00000316398|CCDC89'] 111538 13002 TLLSYQASGNL True PC9_epitope_Rep2 1165.59790287629 1165.5962549037902 55.299 3 -0.8794341487483089 0.2657693768195435 1.0 ['ENST00000443660.5_1_22:19420361-19420817:+|nuORF'] 65890 10477 LSLDTGYRAP True PC9_epitope_Rep2 1091.56112344475 1091.56002993586 45.616 2 -0.8794493539661088 0.265779702970297 1.0 ['ENSG00000159871|ENST00000377950|LYPD5', 'nc|ENSG00000159871|Q6UWN5-2|LYPD5'] 83155 8516 PYSIMRSV True PC9_epitope_Rep1 951.48478770035 951.48368993586 37.594 2 -0.8794591570626754 0.26579002883060265 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 12466 27156 DKRREYVYQL True PC9_epitope_Rep1 1368.7149983171998 1368.71390993586 110.86 2 -0.8795528353558222 0.2658284814221022 1.0 ['PPP4R1|p.L741V|2|0.37|ENSG00000154845|chr18:9553392-9553392|G/C|missense_variant'] 19533 14887 ELQQVEGLK True H1975_Epitope_Rep1 1042.5658744720197 1042.56537496793 62.498 1 -0.8795752105093116 0.2658528696190248 1.0 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1', 'ENST00000502531.1_1_5:179023563-179032937:+|nuORF'] 16510 8855 EENKYSRYRML True H1975_Epitope_Rep1 1487.7190977214698 1487.7180099358602 38.984 2 -0.8797964018939888 0.2659438327075335 1.0 ['ENST00000366525.8_2_1:245025904-245026177:-|nuORF'] 14603 10228 DVILVESQDPP True H1975_Epitope_Rep3 1210.60813320682 1210.60702993586 44.389 2 -0.8797974907582907 0.2659438327075335 1.0 ['ENSG00000174460|ENST00000310164|ZCCHC12'] 16843 15658 EFRERMLEI True PC9_epitope_Rep3 1221.6175927750498 1221.61594490379 65.373 3 -0.8798843122569132 0.26596073799077513 1.0 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2'] 37626 13799 HAAAVLLL True PC9_epitope_Rep2 806.50142374066 806.50032993586 58.361 2 -0.8799157278325814 0.26596073799077513 1.0 ['nc|ENSG00000074410|O43570-2|CA12', 'ENSG00000074410|ENST00000178638|CA12'] 16620 3645 EESCSHEC True H1975_Epitope_Rep2 922.2796821840199 922.2785899358599 18.973 2 -0.8799311703360555 0.26596073799077513 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 105125 9946 STLPKSLSL True PC9_epitope_Rep4 944.55424715916 944.55314993586 45.912 2 -0.8800183433154555 0.2659879633275212 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 113742 20571 TRDLVVRLPR True NCI_RA007_Epitope_Rep4 1223.74623887583 1223.7445949037901 89.101 3 -0.8800236352586869 0.2659879633275212 1.0 ['nc|ENSG00000156469|Q96E29-3|MTERF3', 'nc|ENSG00000156469|Q96E29-2|MTERF3', 'ENSG00000156469|ENST00000287025|MTERF3'] 82565 14653 PVGREIAGI True PC9_epitope_Rep3 910.5236157372198 910.52250993586 61.497 2 -0.8800425616000715 0.2659879633275212 1.0 ['ENST00000490714.1_1_21:34975667-35014025:-|nuORF', 'nc|ENSG00000205758|O95825-2|CRYZL1', 'ENSG00000205758|ENST00000381554|CRYZL1'] 25707 6638 FFHLHWHFLNL True PC9_epitope_Rep3 1509.7669743204099 1509.76531490379 30.556 3 -0.8800656443052446 0.2659879633275212 1.0 ['TAS2R41|p.S94L|1|0.41|ENSG00000221855|chr7:143478153-143478153|C/T|missense_variant'] 104043 23235 SRTALLGTSLA True PC9_epitope_Rep2 1088.61897267404 1088.6178699358602 94.857 2 -0.8800979475574684 0.2659982845170634 1.0 ['ENST00000513970.5_2_5:137673767-137673917:-|nuORF'] 139157 8890 YSRYPWHRFPV True H1975_Epitope_Rep3 1506.75205253226 1506.75094993586 39.196 2 -0.8801701204146876 0.2660086054163503 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'LY75|p.E1442Kfs*4|1|0.35|ENSG00000054219|chr2:159816862-159816862|C/-|frameshift_variant'] 119396 5491 VENWQGNPIQK True NCI_RA007_Epitope_Rep2 1311.6571490879098 1311.6555149037902 25.976 3 -0.8802628074783369 0.26603582576417983 1.0 ['ENSG00000129933|ENST00000262815|MAU2'] 60357 9108 LIHLYQVLKY True NCI_RA007_Epitope_Rep2 1288.75434394804 1288.7532499358601 40.034 2 -0.8802890847027391 0.26603582576417983 1.0 ['ENST00000378509.8_1_7:133976258-133976573:-|nuORF'] 121576 3660 VGKTYFFKGEW True NCI_RA007_Epitope_Rep1 1360.6815729306 1360.67992490379 18.188 3 -0.8802975823175215 0.26603582576417983 1.0 ['MMP24|p.R495W|1|0.27|ENSG00000125966|chr20:35271718-35271718|C/T|missense_variant'] 24654 4964 FASPTQVFFNG True NCI_RA007_Epitope_Rep2 1213.5767735088896 1213.57566993586 23.93 2 -0.8803038735625563 0.26603582576417983 1.0 ['ENSG00000099624|ENST00000215375|ATP5F1D'] 66069 10486 LSNIRWWLEEY True H1975_Epitope_Rep1 1507.7459640923103 1507.7448699358602 45.289 2 -0.8803671835068195 0.26604614541006427 1.0 ['ENSG00000114480|ENST00000429644|GBE1', 'GBE1-ZNF385D|1|fusion'] 55268 10588 LAQQLQKAL True PC9_epitope_Rep4 1011.6076797143498 1011.60658993586 48.469 2 -0.8803986571708642 0.26607052471739495 1.0 ['ENSG00000128815|ENST00000325239|WDFY4', 'nc|ENSG00000128815|Q6ZS81-4|WDFY4', 'nc|ENSG00000128815|Q6ZS81-5|WDFY4', 'nc|ENSG00000128815|Q6ZS81-2|WDFY4', 'nc|ENSG00000128815|Q6ZS81-3|WDFY4'] 13358 9847 DNASPKFTSKE True H1975_Epitope_Rep3 1222.5829810881403 1222.58188993586 42.906 2 -0.8804136775653544 0.26607710260664175 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 3349 3230 AGHQAMHYSRP True NCI_RA007_Epitope_Rep2 1253.57237391813 1253.57126993586 17.22 2 -0.8804284285017253 0.26607710260664175 1.0 ['nc|ENSG00000112425|O95278-5|EPM2A'] 111149 19987 TLERWYAI True PC9_epitope_Rep5 1050.54983048506 1050.5487299358601 81.934 2 -0.880461857996341 0.2660874210918498 1.0 ['nc|ENSG00000165409|P16473|TSHR', 'ENSG00000165409|ENST00000298171|TSHR'] 19903 16112 ELWRQRQEWQE True H1975_Epitope_Rep1 1586.7589883874996 1586.75788993586 67.319 2 -0.8804715616690532 0.2660977392869194 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 123520 8402 VIHSPKKVP True H1975_Epitope_Rep1 1003.61785047523 1003.61674993586 37.246 2 -0.880545161087582 0.26614275069941373 1.0 ['ENSG00000256394|ENST00000537611|ASIC5'] 19748 7891 ELSRYPRYL True PC9_epitope_Rep2 1195.6349570913499 1195.63330490379 35.718 3 -0.8806190529001496 0.26614275069941373 1.0 ['ENSG00000261115|ENST00000565468|TMEM178B'] 135870 5309 YERQSPTP True NCI_RA007_Epitope_Rep5 976.4614094034799 976.46030993586 27.115 2 -0.8806241222299219 0.26614275069941373 1.0 ['ENST00000480958.1_1_17:41902775-41908980:-|nuORF', 'nc|ENSG00000161647|Q13368-2|MPP3', 'ENST00000589375.5_1_17:41895408-41909274:-|nuORF', 'ENSG00000161647|ENST00000398389|MPP3'] 123004 15879 VGWSLWLECL True NCI_RA007_Epitope_Rep3 1204.5950664253198 1204.59396993586 70.116 2 -0.8806933271569629 0.2661811842771186 1.0 ['ENST00000591325.1_1_19:58790350-58790572:+|nuORF'] 130777 5368 VVEHKEHRCR True NCI_RA007_Epitope_Rep2 1291.65677224843 1291.65566993586 25.498 2 -0.8807535809741418 0.2662196167742117 1.0 ['nc|ENSG00000166436|O15016|TRIM66', 'ENSG00000166436|ENST00000646038|TRIM66', 'ENST00000531498.5_1_11:8665946-8673385:-|nuORF', 'nc|ENSG00000166436|O15016-3|TRIM66', 'ENST00000481014.6_1_11:8646046-8673385:-|nuORF'] 115800 5769 TVMADSFQIK True NCI_RA007_Epitope_Rep5 1138.5692456003 1138.56760490379 28.878 3 -0.8808514594870922 0.2662580481907386 1.0 ['CLMN|p.K654Sfs*91|1|0.27|ENSG00000165959|chr14:95203388-95203388|T/-|frameshift_variant', 'ENST00000556454.1_1_14:95660863-95677170:-|nuORF', 'ENSG00000165959|ENST00000298912|CLMN'] 16721 9339 EEWERKQRELQ True NCI_RA007_Epitope_Rep2 1529.7586540343298 1529.7575499358602 40.935 2 -0.8809222681031076 0.26626753239452455 1.0 ['ITSN2|p.G507Afs*55|1|0.21|ENSG00000198399|chr2:24295779-24295779|C/-|frameshift_variant', 'nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2'] 102783 6415 SQEPSSSADPK True NCI_RA007_Epitope_Rep5 1131.5043964142699 1131.50328993586 31.346 2 -0.8809834569469189 0.26626753239452455 1.0 ['nc|ENSG00000198431|Q16881-6|TXNRD1', 'ENST00000526950.1_1_12:104703637-104742190:+|nuORF'] 59357 7502 LGKRKPGK True NCI_RA007_Epitope_Rep4 882.5763200164198 882.57522993586 35.501 2 -0.8810004645193871 0.26626753239452455 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1'] 14746 16947 DVVKVLSKTTE True NCI_RA007_Epitope_Rep2 1217.68671788069 1217.68617496793 70.658 1 -0.8810155201376033 0.26626753239452455 1.0 ['ENSG00000214193|ENST00000453908|SH3D21', 'nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21'] 20848 17388 EQQKWVSRLVK True NCI_RA007_Epitope_Rep2 1399.79358299107 1399.7924899358602 72.378 2 -0.8810307876976904 0.26626753239452455 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 129013 9247 VSYSWTAW True PC9_epitope_Rep2 998.4497820906199 998.44868993586 40.907 2 -0.8810889375013492 0.26626753239452455 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 11533 5921 DGLGPAEAP True H1975_Epitope_Rep3 825.38684748089 825.3862949679301 27.784 1 -0.881100394331934 0.26626753239452455 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1'] 24936 13447 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 56.948 2 -0.8811004028154833 0.26626753239452455 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 36638 10141 GVLPGGHL True PC9_epitope_Rep5 748.42317341996 748.42206993586 43.992 2 -0.8811801782617469 0.26626753239452455 1.0 ['ENST00000530254.6_1_17:27426730-27430635:-|nuORF'] 84320 23490 QFLRLLLLWVP True PC9_epitope_Rep1 1396.8594777229198 1396.85838993586 95.14 2 -0.8812284716827485 0.26626753239452455 1.0 ['nc|ENSG00000211626|A0A0C4DH26|IGKV6D-41'] 46002 9825 ISTRSKDP True PC9_epitope_Rep1 902.4821448480599 902.48104993586 42.653 2 -0.8812540208273016 0.26626753239452455 1.0 ['nc|ENSG00000101040|Q9ULU4-19|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-17|ZMYND8', 'ENSG00000101040|ENST00000471951|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-11|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-10|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-13|ZMYND8', 'nc|ENSG00000101040|Q9ULU4|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-20|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-5|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-9|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-16|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-22|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-12|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-14|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-18|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-21|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-8|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-23|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-15|ZMYND8', 'ZMYND8|p.V93Ffs*23|2|0.29|ENSG00000101040|chr20:47298845-47298845|C/-|frameshift_variant'] 83425 19480 QCITELSDMVP True PC9_epitope_Rep2 1234.5573605872598 1234.5562699358602 80.311 2 -0.8812554218400277 0.26626753239452455 1.0 ['ARNT2|p.Y82C|1|0.43|ENSG00000172379|chr15:80470268-80470268|A/G|missense_variant'] 8399 6780 ATQDCCGLCFY True H1975_Epitope_Rep2 1222.4457019633 1222.4446099358602 30.994 2 -0.8813154983771759 0.26626753239452455 1.0 ['ENST00000451837.5_1_22:24056401-24057262:-|nuORF'] 65590 8008 LSGIPGVSLK True NCI_RA007_Epitope_Rep3 969.58588164061 969.58478993586 38.595 2 -0.8813415886603666 0.26626753239452455 1.0 ['ENST00000341861.9_1_15:65804713-65804842:-|nuORF'] 131306 7309 VVQSFDMFKDK True NCI_RA007_Epitope_Rep4 1342.6591232338599 1342.6580299358602 34.75 2 -0.8813623400679488 0.26626753239452455 1.0 ['ARID5B|p.P1134Lfs*14|1|0.31|ENSG00000150347|chr10:62092863-62092872|CCGACAAATT/-|frameshift_variant', 'ENSG00000150347|ENST00000279873|ARID5B', 'nc|ENSG00000150347|Q14865-2|ARID5B'] 65277 9382 LSEIMEKGQ True H1975_Epitope_Rep1 1033.51139637101 1033.51028993586 40.998 2 -0.8813910747502816 0.26626753239452455 1.0 ['ENSG00000106992|ENST00000644144|AK1'] 24990 15140 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 65.809 2 -0.8814043705572409 0.26626753239452455 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 60566 13507 LIRCPCVSAVC True PC9_epitope_Rep5 1162.5660918795 1162.5644549037902 56.974 3 -0.8814299831079945 0.26626753239452455 1.0 ['ENST00000468392.5_1_21:45165928-45175941:+|nuORF'] 62012 21427 LLLSGRRNVWK True PC9_epitope_Rep5 1340.80408810512 1340.80298993586 87.482 2 -0.8814323497793588 0.26626753239452455 1.0 ['ENSG00000151470|ENST00000425929|C4orf33'] 134935 11066 YAEQIMMIK True PC9_epitope_Rep3 1125.5562383884499 1125.55459490379 47.565 3 -0.8814422119212334 0.26626753239452455 1.0 ['ENSG00000129173|ENST00000250024|E2F8'] 111095 10067 TLEELEDHEG True PC9_epitope_Rep1 1170.5040620611 1170.5029699358602 43.593 2 -0.881506982323586 0.2662703599083716 1.0 ['ENST00000398028.3_1_6:151148820-151149375:+|nuORF'] 81396 3930 PPVMCVCVC True PC9_epitope_Rep2 949.38937338749 949.38826993586 20.381 2 -0.8815258234290422 0.2662703599083716 1.0 ['ENST00000529335.6_1_11:117708738-117708825:-|nuORF'] 52042 13613 KLHEYFHEPNK True H1975_Epitope_Rep3 1440.7149983172 1440.71390993586 57.65 2 -0.8815314921152066 0.2662703599083716 1.0 ['ENSG00000002587|ENST00000002596|HS3ST1'] 38323 10161 HFTYVVIGYG True NCI_RA007_Epitope_Rep5 1154.5760452328998 1154.5744049037899 45.718 3 -0.8816080461965818 0.26629472441608815 1.0 ['nc|ENSG00000237621|Q8NGU1|OR9A1P'] 126249 8222 VPGYTANG True PC9_epitope_Rep4 777.36571811349 777.36516496793 39.086 1 -0.881620756231098 0.2663050352028556 1.0 ['ENSG00000137975|ENST00000370565|CLCA2'] 58860 10107 LFSDQQQSLY True H1975_Epitope_Rep2 1227.57716743171 1227.5755349037902 43.872 3 -0.8817592553163064 0.26637155705452503 1.0 ['ENST00000452859.6_1_17:46185151-46190715:+|nuORF'] 44049 19734 ILLFRRPLPK True H1975_Epitope_Rep1 1251.8179472641098 1251.81631490379 82.137 3 -0.8817749542404996 0.2663959191129973 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 79061 18083 PFSGKSFYL True PC9_epitope_Rep3 1044.5280324113198 1044.5269299358602 74.754 2 -0.8818078788031264 0.26642028048677663 1.0 ['DBF4B|p.R381Sfs*109|1|0.3|ENSG00000161692|chr17:44748416-44748421|CAGGGC/A|frameshift_variant', 'ENSG00000161692|ENST00000315005|DBF4B', 'ENST00000526915.5_1_17:42786185-42811460:+|nuORF', 'nc|ENSG00000161692|Q8NFT6-4|DBF4B', 'ENST00000528766.5_1_17:42786185-42808425:+|nuORF', 'nc|ENSG00000161692|Q8NFT6-2|DBF4B'] 118259 3384 VCLPSADDD True PC9_epitope_Rep3 933.37496246785 933.37386993586 18.138 2 -0.8818380451054568 0.26644464117589195 1.0 ['ENSG00000168928|ENST00000303037|CTRB2', 'ENSG00000168925|ENST00000361017|CTRB1'] 69260 24276 LVPAMLWGL True PC9_epitope_Rep5 998.5623097450599 998.56120993586 98.392 2 -0.881849075435603 0.2664512049462517 1.0 ['nc|ENSG00000163703|Q96HD1-2|CRELD1', 'ENSG00000163703|ENST00000452070|CRELD1'] 112524 13226 TPAELIERLEQ True NCI_RA007_Epitope_Rep2 1297.68778050985 1297.6866899358602 56.078 2 -0.8818533069901112 0.2664512049462517 1.0 ['nc|ENSG00000147536|Q9BRT9-2|GINS4', 'ENSG00000147536|ENST00000276533|GINS4'] 56238 13458 LDPVMDLLAL True PC9_epitope_Rep2 1098.59948309942 1098.59838993586 57.044 2 -0.881894708256625 0.26645776834768925 1.0 ['ENSG00000178996|ENST00000381410|SNX18', 'nc|ENSG00000178996|Q96RF0-3|SNX18', 'nc|ENSG00000178996|Q96RF0|SNX18'] 24930 2407 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 13.179 2 -0.8818962535676995 0.26645776834768925 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 81779 14228 PSEKARLTYTL True PC9_epitope_Rep6 1277.6979512707298 1277.6968499358602 66.618 2 -0.8819075885229104 0.2664840182648402 1.0 ['BLNK|p.S151Y|1|0.23|ENSG00000095585|chr10:96223899-96223899|G/T|missense_variant'] 135206 16083 YAVLHWLG True PC9_epitope_Rep4 957.50723739709 957.50614993586 69.797 2 -0.8819468176458186 0.2664840182648402 1.0 ['OR2B11|p.F108L|1|0.11|ENSG00000177535|chr1:247451659-247451659|G/T|missense_variant'] 16610 4828 EERSLLAEQRE True H1975_Epitope_Rep3 1358.6790067312998 1358.67790993586 23.696 2 -0.8819585402469169 0.2664840182648402 1.0 ['nc|ENSG00000213085|Q9UL16-2|CFAP45', 'ENSG00000213085|ENST00000368099|CFAP45'] 138648 14614 YRRRLWKWWK True H1975_Epitope_Rep1 1576.8891551417598 1576.8880499358602 61.423 2 -0.8819610756442999 0.2664840182648402 1.0 ['ENST00000461642.2_1_20:25470551-25477423:-|nuORF'] 122901 17838 VGVRRVPPTR True NCI_RA007_Epitope_Rep3 1135.6938093801498 1135.69327496793 78.212 1 -0.8819829726455979 0.2664840182648402 1.0 ['ENST00000368039.2_1_1:160771789-160771924:+|nuORF'] 12093 12274 DIFHERDYKKK True H1975_Epitope_Rep1 1477.7677621660494 1477.7666699358601 52.236 2 -0.882004434171601 0.2664840182648402 1.0 ['ENST00000330137.11_1_17:57189463-57189511:-|nuORF'] 56629 3686 LDYRPKVLM True NCI_RA007_Epitope_Rep2 1133.6267009067699 1133.62504490379 18.988 3 -0.8820101534484523 0.2664840182648402 1.0 ['ENST00000313771.9_1_10:90751381-90762834:+|nuORF', 'ENST00000477270.5_1_10:90750964-90762834:+|nuORF'] 80315 12772 PLFFHTHHCLP True H1975_Epitope_Rep1 1347.65464699011 1347.6535499358602 54.188 2 -0.8820361498960587 0.2664840182648402 1.0 ['ENST00000267116.7_1_12:56636474-56636675:-|nuORF'] 82379 17726 PTVPSTEAQ True PC9_epitope_Rep5 928.4501760134399 928.44906993586 73.199 2 -0.8820885939196946 0.26649057982213353 1.0 ['ENSG00000171872|ENST00000372299|KLF17'] 82731 16845 PVPTLWNEPAE True NCI_RA007_Epitope_Rep2 1251.6135529404298 1251.6129749679299 70.258 1 -0.8820938665274716 0.26649057982213353 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 122902 18655 VGVRRVPPTR True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.69327496793 78.567 1 -0.8821553227663149 0.26649714101069133 1.0 ['ENST00000368039.2_1_1:160771789-160771924:+|nuORF'] 123462 17531 VIFKYWKFHFQ True H1975_Epitope_Rep1 1541.8183411869297 1541.8172499358602 72.932 2 -0.8821581093097559 0.26649714101069133 1.0 ['ENST00000524683.5_1_11:121175009-121175207:+|nuORF'] 72883 4438 NATLQSHTLA True H1975_Epitope_Rep1 1054.54072235334 1054.5396299358601 22.082 2 -0.882210846278629 0.2665177505233138 1.0 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8'] 81351 24831 PPRRGGVLLG True PC9_epitope_Rep4 1020.6192474575597 1020.61814993586 104.02 2 -0.882225474630336 0.2665177505233138 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 99829 11506 SLGVLSPV True H1975_Epitope_Rep1 770.4538048418999 770.4532549679301 49.242 1 -0.882270686035666 0.26652056641942007 1.0 ['ENSG00000180116|ENST00000324616|C12orf40', 'nc|ENSG00000180116|Q86WS4-2|REDIC1'] 13436 7084 DNRTYRYSNRY True NCI_RA007_Epitope_Rep2 1506.69638813094 1506.69528993586 32.18 2 -0.8822783951886756 0.26652056641942007 1.0 ['nc|ENSG00000105204|Q9Y463-2|DYRK1B', 'nc|ENSG00000105204|Q9Y463-3|DYRK1B', 'ENSG00000105204|ENST00000323039|DYRK1B'] 112819 10587 TPLTYNKKY True H1975_Epitope_Rep1 1126.60225998074 1126.60116993586 45.676 2 -0.8823189096962988 0.26652056641942007 1.0 ['nc|ENSG00000010379|Q9NSD5-2|SLC6A13', 'ENSG00000010379|ENST00000343164|SLC6A13'] 14518 3876 DTYWYHDEKLL True NCI_RA007_Epitope_Rep1 1481.68269512941 1481.68105490379 19.096 3 -0.8823650313546221 0.26654117382631415 1.0 ['nc|ENSG00000160856|Q96P31-4|FCRL3', 'ENST00000480682.5_1_1:157667440-157670285:-|nuORF', 'nc|ENSG00000160856|Q96P31-5|FCRL3', 'ENST00000494724.5_1_1:157667081-157670285:-|nuORF', 'nc|ENSG00000160856|Q96P31-2|FCRL3', 'nc|ENSG00000160856|Q96P31-7|FCRL3', 'ENSG00000160856|ENST00000368184|FCRL3', 'nc|ENSG00000160856|Q96P31-3|FCRL3', 'nc|ENSG00000160856|Q96P31-6|FCRL3'] 16356 16345 EEKSLLNLS True PC9_epitope_Rep4 1031.54989005471 1031.54937496793 70.836 1 -0.8823729211828757 0.26654117382631415 1.0 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C'] 3147 9443 AGDTWASEVGP True PC9_epitope_Rep1 1088.47745339044 1088.47634993586 41.179 2 -0.8824382591132199 0.2665542913330524 1.0 ['nc|ENSG00000139291|Q96HH6-2|TMEM19', 'ENSG00000139291|ENST00000266673|TMEM19'] 139180 17380 YSSYRTPSI True PC9_epitope_Rep5 1072.5189242796 1072.5178299358602 71.852 2 -0.8824443049948666 0.2665542913330524 1.0 ['CTNND2|p.S1054Y|1|0.46|ENSG00000169862|chr5:10992601-10992601|G/T|missense_variant'] 129674 8977 VTIHKQDGK True NCI_RA007_Epitope_Rep1 1024.5665431783598 1024.5654499358602 38.92 2 -0.8824477188817857 0.2665542913330524 1.0 ['ENSG00000096968|ENST00000381652|JAK2'] 112495 18905 TNRVRIGKTLP True H1975_Epitope_Rep2 1253.7568035595298 1253.75570993586 78.481 2 -0.8824516136457733 0.2665542913330524 1.0 ['ZNF638|p.K1854N|1|0.04|ENSG00000075292|chr2:71428563-71428563|G/C|missense_variant'] 55664 7329 LDASGPARDLV True NCI_RA007_Epitope_Rep1 1112.5825871653199 1112.5814899358602 32.502 2 -0.8824850514166348 0.2665748960557366 1.0 ['nc|ENSG00000167600|Q96SQ9-2|CYP2S1', 'ENSG00000167600|ENST00000310054|CYP2S1'] 116061 13124 TVRTWKVE True PC9_epitope_Rep1 1017.5607295219298 1017.55962993586 55.349 2 -0.8824952041500063 0.2665748960557366 1.0 ['WDR70|p.E312K|1|0.39|ENSG00000082068|chr5:37605080-37605080|G/A|missense_variant'] 125329 20447 VLSEIDKL True PC9_epitope_Rep3 915.5276980581499 915.52660993586 83.906 2 -0.8825375933766202 0.2665954996207546 1.0 ['ENST00000498255.6_1_13:42728006-42769963:+|nuORF', 'nc|ENSG00000102780|Q86XP1-5|DGKH', 'nc|ENSG00000102780|Q86XP1-3|DGKH', 'nc|ENSG00000102780|Q86XP1-2|DGKH', 'ENSG00000102780|ENST00000337343|DGKH'] 28606 18738 FSQQQTLPV True PC9_epitope_Rep1 1046.53965972418 1046.53856993586 76.865 2 -0.8825979119592257 0.2665954996207546 1.0 ['nc|ENSG00000165643|Q5JUK2|SOHLH1', 'ENSG00000165643|ENST00000425225|SOHLH1'] 34060 17559 GNRHARRV True NCI_RA007_Epitope_Rep5 964.54272847236 964.54162993586 74.329 2 -0.882613871987151 0.2666198468993609 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 84752 8344 QHHLVEYMERR True NCI_RA007_Epitope_Rep2 1496.7306654646798 1496.72902490379 37.096 3 -0.8826187062731947 0.26663014776111016 1.0 ['ENST00000369551.5_2_1:114522093-114522683:+|nuORF', 'ENST00000491700.1_1_1:114522138-114523244:+|nuORF', 'nc|ENSG00000116774|Q9NRN5-3|OLFML3', 'ENSG00000116774|ENST00000320334|OLFML3'] 112499 6372 TNSATENDES True PC9_epitope_Rep5 1066.40507629582 1066.40396993586 29.487 2 -0.8826613048277424 0.2666432584269663 1.0 ['ENST00000457681.1_1_9:115246828-115249324:-|nuORF'] 86273 9708 QQDPQQYNV True PC9_epitope_Rep1 1118.49925146418 1118.49867496793 42.199 1 -0.8826910593424366 0.2666432584269663 1.0 ['ENSG00000106546|ENST00000242057|AHR'] 140221 4183 YWLFYRSLREY True NCI_RA007_Epitope_Rep2 1594.7932486379 1594.7910598717199 20.909 4 -0.8827274116030792 0.2666432584269663 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 116771 20661 TYLFVQLCKV True PC9_epitope_Rep3 1212.65766668188 1212.65656993586 84.746 2 -0.8827529938489345 0.2666432584269663 1.0 ['ENST00000596232.1_1_19:36036641-36037015:+|nuORF'] 30334 10234 GADRPFHLSAR True H1975_Epitope_Rep3 1225.63160304641 1225.6305099358601 44.413 2 -0.882845272340995 0.26667415698776736 1.0 ['ENSG00000147119|ENST00000276055|CHST7'] 27254 7748 FLWHTYRWLL True NCI_RA007_Epitope_Rep4 1433.7608263108098 1433.7591749037902 36.481 3 -0.8828519290674395 0.26667415698776736 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 10498 7320 CNLPEHWT True PC9_epitope_Rep1 998.4280011002201 998.42690993586 32.969 2 -0.8828634474161274 0.26667415698776736 1.0 ['nc|ENSG00000173200|Q460N3-2|PARP15', 'ENSG00000173200|ENST00000464300|PARP15'] 43885 13595 ILDGESAP True PC9_epitope_Rep3 800.39159850816 800.39050993586 57.355 2 -0.8828784410817659 0.2666807106242539 1.0 ['ENSG00000144843|ENST00000357003|ADPRH', 'ENST00000471850.1_1_3:119298364-119306722:+|nuORF'] 54976 5640 LAIDHIRRTM True NCI_RA007_Epitope_Rep1 1224.67611071068 1224.67447490379 25.999 3 -0.8828789381054439 0.2666807106242539 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2'] 42453 11566 IEQMQKIEENR True NCI_RA007_Epitope_Rep1 1416.7031133041598 1416.7020099358601 48.958 2 -0.8828945578069318 0.2666910091846193 1.0 ['ENSG00000138050|ENST00000505747|THUMPD2', 'ENST00000460072.5_1_2:39996735-39997113:-|nuORF', 'nc|ENSG00000138050|Q9BTF0-2|THUMPD2'] 18620 12803 ELALFFKGPGP True PC9_epitope_Rep3 1174.6386454894598 1174.63754993586 54.269 2 -0.8829024613014888 0.2666938167928211 1.0 ['ENST00000271332.3_1_1:109817722-109817794:+|nuORF'] 118613 17489 VEANGGIKIKL True H1975_Epitope_Rep2 1140.68665831104 1140.68500490379 72.562 3 -0.8829274767694167 0.2666938167928211 1.0 ['GRM1|p.T339K|1|0.16|ENSG00000152822|chr6:146304676-146304676|C/A|missense_variant'] 19035 12386 ELGMIADA True PC9_epitope_Rep2 818.3844049527399 818.38330993586 52.952 2 -0.8829346730412773 0.2666938167928211 1.0 ['TKFC|p.I279M|1|0.05|ENSG00000149476|chr11:61342816-61342816|C/G|missense_variant'] 24939 13816 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 58.39 2 -0.8829389543691484 0.2666984933795757 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 118986 21663 VEFFEKLLL True PC9_epitope_Rep1 1136.6481475439998 1136.6470499358602 88.155 2 -0.8830140301561196 0.2666984933795757 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 20846 16853 EQQKWVSRLVK True H1975_Epitope_Rep3 1399.79358299107 1399.7924899358602 70.377 2 -0.8830462898081031 0.2666984933795757 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 12359 20170 DIYKKQLL True PC9_epitope_Rep1 1019.60153170475 1019.60042993586 82.413 2 -0.8830548296328715 0.2666984933795757 1.0 ['ENSG00000174776|ENST00000682715|WDR49', 'nc|ENSG00000174776|Q8IV35-3|CFAP337', 'nc|ENSG00000174776|Q8IV35-2|CFAP337'] 119979 6859 VEYYYIWKKMI True NCI_RA007_Epitope_Rep1 1534.7894091274195 1534.78777490379 30.684 3 -0.883069948121973 0.2666984933795757 1.0 ['ENSG00000118156|ENST00000391901|ZNF541', 'nc|ENSG00000118156|Q9H0D2-2|ZNF541'] 42065 15314 IEEELKEQL True PC9_epitope_Rep2 1129.5866694862498 1129.5855699358601 64.186 2 -0.8831147283589308 0.2666984933795757 1.0 ['ENSG00000149548|ENST00000344762|CCDC15', 'CCDC15|p.E313Kfs*25|1|0.36|ENSG00000149548|chr11:124987162-124987162|G/-|frameshift_variant'] 125087 25544 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 103.26 3 -0.8831379776555697 0.2666984933795757 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 112348 12955 TMSCGEAP True H1975_Epitope_Rep2 794.29387569618 794.2933249679301 54.948 1 -0.8832114500254319 0.2666984933795757 1.0 ['ENST00000361837.8_1_16:2512483-2514109:+|nuORF'] 24969 14918 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 66.122 2 -0.8832234195463173 0.2666984933795757 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 125351 19731 VLSMEINIL True PC9_epitope_Rep6 1030.5732683515798 1030.57216993586 88.553 2 -0.8832595565619545 0.2666984933795757 1.0 ['ENST00000487204.1_1_X:50085140-50094699:+|nuORF', 'nc|ENSG00000147082|Q8WWL7-2|CCNB3', 'ENSG00000147082|ENST00000376042|CCNB3'] 26507 15885 FISQSFHSF True PC9_epitope_Rep4 1098.5134449763398 1098.5123499358601 69.032 2 -0.8833224876754727 0.26670878966582423 1.0 ['ENSG00000176571|ENST00000518476|CNBD1'] 68444 7238 LTTQCELLTQ True NCI_RA007_Epitope_Rep2 1148.5747249035599 1148.57362993586 32.774 2 -0.8833646357473706 0.26676120807065334 1.0 ['nc|ENSG00000168071|A6NC98-4|CCDC88B', 'ENSG00000168071|ENST00000356786|CCDC88B', 'ENST00000479965.5_1_11:64120415-64123189:+|nuORF', 'nc|ENSG00000168071|A6NC98-5|CCDC88B'] 128834 11599 VSSGCARR True H1975_Epitope_Rep3 834.4130197424199 834.41247496793 49.747 1 -0.8833858861537316 0.2667705613118805 1.0 ['ENST00000311506.9_1_17:60501366-60503794:+|nuORF', 'ENST00000482555.5_1_7:128117122-128119346:+|nuORF'] 19912 4618 ELWWQGLPP True H1975_Epitope_Rep2 1124.5654805491997 1124.5638449037901 22.865 3 -0.8833939358111891 0.2667705613118805 1.0 ['ENSG00000108239|ENST00000225235|TBC1D12'] 12627 10662 DLEEKELPWRR True H1975_Epitope_Rep1 1469.7626767856098 1469.76156993586 45.968 2 -0.8833988876203835 0.2667705613118805 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 110426 10776 TINGSTHVL True PC9_epitope_Rep1 940.4977949122 940.49668993586 46.337 2 -0.883420382627724 0.2667705613118805 1.0 ['nc|ENSG00000164270|Q13639-4|HTR4', 'nc|ENSG00000164270|Q13639-7|HTR4', 'nc|ENSG00000164270|Q13639-3|HTR4', 'nc|ENSG00000164270|Q13639-5|HTR4', 'nc|ENSG00000164270|Q13639-2|HTR4', 'ENSG00000164270|ENST00000377888|HTR4', 'nc|ENSG00000164270|Q13639-6|HTR4', 'nc|ENSG00000164270|Q13639-9|HTR4', 'nc|ENSG00000164270|Q13639-8|HTR4'] 111863 4172 TLRLESTLYL True NCI_RA007_Epitope_Rep4 1207.68123857743 1207.67959490379 22.348 3 -0.8834391820651363 0.2667705613118805 1.0 ['PRRG3|p.V169L|2|0.26|ENSG00000130032|chrX:151700842-151700842|G/C|missense_variant'] 139763 19399 YVAIINKSI True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 79.996 2 -0.8835833366797253 0.26682014065329385 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000593203.1_1_19:10934344-10943016:+|nuORF'] 125665 22224 VMQLYVSMP True PC9_epitope_Rep1 1066.51912460374 1066.51802993586 90.308 2 -0.88361777941908 0.26682014065329385 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 58671 19946 LFHWRTRLRRK True H1975_Epitope_Rep3 1567.93241693607 1567.93130993586 83.479 2 -0.8836210058849879 0.26682014065329385 1.0 ['ENST00000560110.1_1_15:44968687-44968816:-|nuORF', 'ENST00000558573.1_1_15:44968687-45003294:-|nuORF'] 8278 5414 ATKFSRCCP True NCI_RA007_Epitope_Rep2 1011.4630067099498 1011.46190993586 25.679 2 -0.8836253949212853 0.26682014065329385 1.0 ['ENSG00000121281|ENST00000673801|ADCY7'] 4330 12321 AIMDPLPLR True NCI_RA007_Epitope_Rep5 1024.57393705792 1024.57282993586 54.043 2 -0.8836533083038021 0.26682014065329385 1.0 ['ENSG00000106546|ENST00000242057|AHR'] 62525 21186 LLSVGSILQ True PC9_epitope_Rep3 928.5593325395998 928.55878496793 86.78 1 -0.8836772793131165 0.26682014065329385 1.0 ['nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-3|PAQR4'] 61005 6497 LLALHSAA True PC9_epitope_Rep5 794.4650382319401 794.46394993586 29.963 2 -0.8837010566646598 0.26682014065329385 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 130271 12191 VTSTITITPV True PC9_epitope_Rep5 1030.5910265906998 1030.58992993586 51.882 2 -0.8837179809961199 0.26682014065329385 1.0 ['nc|ENSG00000118407|Q7Z7B0-2|FILIP1', 'ENSG00000118407|ENST00000237172|FILIP1', 'nc|ENSG00000118407|Q7Z7B0-3|FILIP1'] 86665 21022 QRGQGRGP True PC9_epitope_Rep4 854.4470967520198 854.44598993586 89.023 2 -0.8837596761829316 0.26682014065329385 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 137511 15246 YLQADFNLL True PC9_epitope_Rep6 1095.56006081559 1095.5589699358602 70.751 2 -0.8838325602605307 0.26682014065329385 1.0 ['SLITRK1|p.P287Qfs*39|1|0.19|ENSG00000178235|chr13:83880650-83880650|C/-|frameshift_variant', 'ENSG00000178235|ENST00000674365|SLITRK1'] 131393 13759 VVSVFYTVVTP True NCI_RA007_Epitope_Rep4 1209.66452588413 1209.6634299358602 60.151 2 -0.8838470084387099 0.26682014065329385 1.0 ['nc|ENSG00000221977|Q8NGC2|OR4E2', 'ENSG00000221977|ENST00000641524|OR4E2'] 85641 7476 QLQAHLDHL True PC9_epitope_Rep2 1073.56179215109 1073.5606899358602 34.128 2 -0.8838474765283376 0.26682014065329385 1.0 ['ENSG00000144395|ENST00000389175|CCDC150'] 123720 13066 VIQINLNSIVP True H1975_Epitope_Rep3 1208.71287305888 1208.71176993586 55.5 2 -0.883848385525333 0.26682014065329385 1.0 ['ENSG00000136381|ENST00000258886|IREB2'] 122150 19800 VGRIQFAV True PC9_epitope_Rep4 888.5181364339599 888.51702993586 84.288 2 -0.8838854965953927 0.26687254351487927 1.0 ['ENSG00000146839|ENST00000613979|ZAN', 'ZAN|p.P2337Tfs*7|1|0.63|ENSG00000146839|chr7:100787917-100787918|-/A|frameshift_variant', 'nc|ENSG00000146839|Q9Y493-5|ZAN', 'nc|ENSG00000146839|Q9Y493-4|ZAN', 'nc|ENSG00000146839|Q9Y493-3|ZAN', 'nc|ENSG00000146839|Q9Y493-6|ZAN', 'nc|ENSG00000146839|Q9Y493-2|ZAN', 'nc|ENSG00000146839|Q9Y493-7|ZAN'] 116412 5768 TWLHYYRNWLQ True H1975_Epitope_Rep1 1578.77318189966 1578.7715249037901 27.258 3 -0.8839380125242574 0.266882834322932 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2'] 59100 5246 LGEESWFIWK True NCI_RA007_Epitope_Rep1 1293.6393737654496 1293.63772490379 24.489 3 -0.8839931496616156 0.26689312484208755 1.0 ['ENST00000233336.6_1_2:113288860-113289121:+|nuORF'] 21939 13689 ESIYSRPGSSI True PC9_epitope_Rep1 1194.5880664685799 1194.58696993586 57.507 2 -0.884021545218225 0.2669099585935855 1.0 ['nc|ENSG00000099204|O14639-3|ABLIM1', 'nc|ENSG00000099204|O14639-5|ABLIM1', 'nc|ENSG00000099204|O14639-2|ABLIM1', 'nc|ENSG00000099204|O14639-6|ABLIM1', 'ENSG00000099204|ENST00000533213|ABLIM1'] 139211 5055 YSVGSESDSSK True NCI_RA007_Epitope_Rep4 1144.48841199696 1144.48675490379 25.942 3 -0.884036267460057 0.2669099585935855 1.0 ['ENSG00000162105|ENST00000601538|SHANK2', 'SHANK2|p.V1494Gfs*6|1|0.14|ENSG00000162105|chr11:70485812-70485813|-/C|frameshift_variant'] 27619 8651 FPVLWHLWIY True PC9_epitope_Rep5 1372.73321458064 1372.73155490379 38.219 3 -0.8840457060561567 0.2669099585935855 1.0 ['nc|ENSG00000101464|Q9H490-2|PIGU', 'ENSG00000101464|ENST00000217446|PIGU'] 102448 10052 SPWTRFQWRRR True PC9_epitope_Rep6 1574.83309681762 1574.83144490379 49.248 3 -0.884052966397625 0.26691650174744197 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 33732 14558 GLRSFTRQARV True H1975_Epitope_Rep1 1289.7316514408499 1289.7305499358602 61.203 2 -0.8840566589835632 0.26691650174744197 1.0 ['ENSG00000149418|ENST00000278742|ST14'] 14466 20563 DTRSRRGRFLN True H1975_Epitope_Rep2 1376.7385277264395 1376.73688490379 85.186 3 -0.8841342976026575 0.26692679092746463 1.0 ['ENSG00000083457|ENST00000263087|ITGAE'] 69402 24018 LVQPTMVVIAL True PC9_epitope_Rep4 1182.7046168743 1182.70297490379 100.85 3 -0.8842084278390185 0.26695391006568236 1.0 ['ENSG00000161509|ENST00000293190|GRIN2C'] 18557 8343 EKVIQYQKQLQ True NCI_RA007_Epitope_Rep1 1403.7772642205898 1403.77561490379 36.452 3 -0.8842120090219812 0.26695391006568236 1.0 ['nc|ENSG00000061337|Q9Y250-2|LZTS1', 'ENSG00000061337|ENST00000381569|LZTS1', 'nc|ENSG00000061337|Q9Y250-3|LZTS1', 'nc|ENSG00000061337|Q9Y250-4|LZTS1'] 94155 25086 RWHSLPPSPL True PC9_epitope_Rep1 1188.64037682496 1188.63874490379 101.38 3 -0.8842165929807406 0.26695391006568236 1.0 ['ENST00000589123.5_2_19:3465565-3466177:+|nuORF'] 24894 13656 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 57.131 2 -0.8842383835128615 0.26695391006568236 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 72215 5958 MRVLVGGG True NCI_RA007_Epitope_Rep3 787.4374435851099 787.43634993586 30.416 2 -0.8842834016939151 0.26699226699226697 1.0 ['ENSG00000100445|ENST00000399395|SDR39U1', 'ENST00000556548.5_1_14:24911464-24911975:-|nuORF', 'SDR39U1|p.S221Pfs*47|1|0.24|ENSG00000100445|chr14:24440304-24440304|A/-|frameshift_variant'] 71107 18788 METILNPYI True H1975_Epitope_Rep2 1092.5525329069999 1092.5514299358601 78.011 2 -0.8843121218317164 0.26700255424256886 1.0 ['SPAM1|p.L371Qfs*18|1|0.46|ENSG00000106304|chr7:123959551-123959551|T/-|frameshift_variant', 'ENSG00000106304|ENST00000682466|SPAM1', 'nc|ENSG00000106304|P38567-2|SPAM1'] 99633 6262 SLFSEWQSK True NCI_RA007_Epitope_Rep2 1110.53457434374 1110.53346993586 28.962 2 -0.8843284433862261 0.267009093971034 1.0 ['ENST00000330287.10_1_X:154065779-154088866:-|nuORF'] 98649 22654 SIPLLWLQ True PC9_epitope_Rep1 968.5695033004799 968.56840993586 91.944 2 -0.8843529198557082 0.267009093971034 1.0 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS', 'ENST00000553314.1_1_12:56814492-56814858:-|nuORF'] 82488 6097 PVEKQLQHEWR True PC9_epitope_Rep4 1448.7524464550797 1448.7508049037901 30.46 3 -0.8843575939558042 0.2670193805520861 1.0 ['EPS8L1|p.R448W|1|0.23|ENSG00000131037|chr19:55083505-55083505|C/T|missense_variant'] 77970 7243 PALGQLKE True H1975_Epitope_Rep2 854.48616759934 854.48506993586 32.794 2 -0.8844542599343982 0.2670670614484375 1.0 ['ENST00000485470.1_1_1:150129349-150129586:+|nuORF'] 116423 11690 TWRTTRTTTRR True NCI_RA007_Epitope_Rep2 1434.7803925384198 1434.77928993586 50.065 2 -0.8844580981071758 0.2670670614484375 1.0 ['IRX2|p.A215Qfs*69|1|0.3|ENSG00000170561|chr5:2749394-2749394|C/-|frameshift_variant'] 120754 8046 VGAVVLYA True NCI_RA007_Epitope_Rep5 790.4588902223398 790.45778993586 37.638 2 -0.8844672947834462 0.2670670614484375 1.0 ['ENST00000272233.5_1_2:20646849-20646981:+|nuORF'] 20544 12558 EQAQQIRLQAE True H1975_Epitope_Rep1 1312.6735274280397 1312.67242993586 53.349 2 -0.8844827754646369 0.2670670614484375 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 93535 18329 RSPRGILG True NCI_RA007_Epitope_Rep4 854.5086343794198 854.50752993586 79.302 2 -0.8845322066325146 0.2670670614484375 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 82364 19522 PTTLVDKV True PC9_epitope_Rep2 871.5014833103099 871.50038993586 80.476 2 -0.8845511607782615 0.2670670614484375 1.0 ['nc|ENSG00000093000|Q9UKX7-2|NUP50', 'ENSG00000093000|ENST00000347635|NUP50'] 99039 15611 SKTQSHSD True H1975_Epitope_Rep2 888.39372376648 888.39262993586 65.204 2 -0.8846390057255469 0.26710166280782993 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 135538 7157 YEEFWIKYAKY True H1975_Epitope_Rep1 1538.74456710998 1538.7429149037903 32.553 3 -0.8846676805891114 0.26710166280782993 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 43154 9966 IGRHFYQRKK True NCI_RA007_Epitope_Rep1 1331.7574722658699 1331.75581490379 42.77 3 -0.884703448859944 0.267125978727584 1.0 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 24863 15953 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 66.817 2 -0.8847268701167436 0.2671325138912275 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 122140 17174 VGRHQRGR True NCI_RA007_Epitope_Rep5 964.5427284723598 964.54217496793 72.832 1 -0.8847317993558255 0.2671325138912275 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 102115 3894 SPQQAEVSPDA True H1975_Epitope_Rep3 1127.50948179471 1127.5083899358601 20.099 2 -0.8848113025671117 0.26721295373865217 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 58482 25529 LEYLQVRRV True PC9_epitope_Rep3 1174.68224163694 1174.68114993586 103.67 2 -0.8848339680801132 0.26722323558299427 1.0 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF', 'SFI1|p.E436Afs*118|1|0.1|ENSG00000198089|chr22:31583929-31583930|AG/-|frameshift_variant'] 70497 14994 LYSTWIGGSI True PC9_epitope_Rep4 1095.5600608155898 1095.5589699358602 65.613 2 -0.8848733039336945 0.2672896409479311 1.0 ['ENSG00000138107|ENST00000369905|ACTR1A', 'ENST00000470322.5_1_10:104240622-104242055:-|nuORF', 'ENSG00000115073|ENST00000289228|ACTR1B'] 98204 11858 SIDVRQKVP True PC9_epitope_Rep6 1040.5978433066398 1040.59674993586 56.822 2 -0.8848964724141786 0.2672904800650936 1.0 ['nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 127657 22018 VRELRGLG True PC9_epitope_Rep4 898.5348491272598 898.53374993586 92.914 2 -0.8849472882018633 0.2672904800650936 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 33758 8406 GLSLASGQKL True PC9_epitope_Rep2 972.56039516876 972.55928993586 37.705 2 -0.8849567466241095 0.2672904800650936 1.0 ['nc|ENSG00000268235|B4DZS4-2|TCP11X1'] 15782 4354 EDFMKLYNHLE True NCI_RA007_Epitope_Rep2 1437.6598515098497 1437.6582149037902 21.572 3 -0.8849780516893676 0.2672904800650936 1.0 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM', 'nc|ENSG00000187790|Q8IYD8-2|FANCM'] 100843 11317 SLSCGHSR True H1975_Epitope_Rep3 845.3813852609701 845.38083496793 48.638 1 -0.8849808429626543 0.2672904800650936 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34'] 1573 4519 AEFAKLNECP True H1975_Epitope_Rep2 1120.52229540788 1120.52118993586 22.495 2 -0.8849864370914493 0.2672904800650936 1.0 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 76828 10238 NVFLRHERFER True H1975_Epitope_Rep3 1501.7902289461297 1501.78912993586 44.428 2 -0.8849882328974845 0.2672904800650936 1.0 ['nc|ENSG00000100284|O60784-3|TOM1', 'ENST00000424387.5_1_22:35695884-35743199:+|nuORF', 'ENSG00000100284|ENST00000449058|TOM1', 'ENST00000491987.1_1_22:35723272-35729230:+|nuORF', 'nc|ENSG00000100284|O60784-4|TOM1', 'nc|ENSG00000100284|O60784-2|TOM1'] 122037 6351 VGQPSHPV True PC9_epitope_Rep3 819.4239016959499 819.42280993586 29.456 2 -0.8850141829557424 0.2672904800650936 1.0 ['ENST00000476089.1_1_2:182321937-182323202:+|nuORF', 'ENST00000465522.5_1_2:182322141-182350724:+|nuORF'] 137733 11773 YNGAAYLK True PC9_epitope_Rep3 898.45486747106 898.45376993586 50.303 2 -0.8850162368981579 0.2672904800650936 1.0 ['KLHL10|p.H332N|1|0.05|ENSG00000161594|chr17:41845435-41845435|C/A|missense_variant'] 58261 10486 LETAMHVKEK True PC9_epitope_Rep2 1184.62234380232 1184.62124993586 45.655 2 -0.885018871213315 0.2672904800650936 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 109154 12762 TFNPTTEI True NCI_RA007_Epitope_Rep3 921.4443623570099 921.44381496793 57.436 1 -0.8850339111354385 0.2672904800650936 1.0 ['UTP18|p.K544Qfs*6|2|0.53|ENSG00000011260|chr17:51294024-51294025|-/G|frameshift_variant', 'ENSG00000011260|ENST00000225298|UTP18'] 139572 19630 YTNPIAKPI True PC9_epitope_Rep4 1015.57023157647 1015.56912993586 83.623 2 -0.8851002150967835 0.2673147875370004 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 93536 18404 RSPRGILG True NCI_RA007_Epitope_Rep4 854.5086343794198 854.50752993586 79.642 2 -0.8851671312913436 0.26733909432691766 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 120608 11444 VGAGHVAPVSP True PC9_epitope_Rep2 989.5294293936499 989.52832993586 49.34 2 -0.8852166079911016 0.26734937223819877 1.0 ['ZNF703|p.G568Dfs*14|1|0.18|ENSG00000183779|chr8:37698603-37698603|G/-|frameshift_variant', 'ZNF703|p.G558Afs*24|1|0.13|ENSG00000183779|chr8:37698569-37698569|G/-|frameshift_variant', 'ENSG00000183779|ENST00000331569|ZNF703'] 60255 68 LIEATVIALTK True H1975_Epitope_Rep1 1170.72237511342 1170.72073490379 0.35833 3 -0.8852556845124802 0.26738770586089833 1.0 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF'] 47139 5291 IWIKNKESRNE True NCI_RA007_Epitope_Rep4 1415.7521121019101 1415.75047490379 26.904 3 -0.8852640125646346 0.2673979828019134 1.0 ['ENSG00000039139|ENST00000265104|DNAH5'] 36965 13476 GVRIQPMSER True PC9_epitope_Rep5 1171.6131761009499 1171.61152490379 56.853 3 -0.8852980942317118 0.26740255550724434 1.0 ['ENSG00000163637|ENST00000638394|PRICKLE2'] 6215 5119 APRFKDFQR True NCI_RA007_Epitope_Rep4 1163.6199757335498 1163.6183249037902 26.205 3 -0.8853040683509171 0.26740255550724434 1.0 ['nc|ENSG00000176845|Q641Q3-2|METRNL', 'ENSG00000176845|ENST00000320095|METRNL'] 41218 7784 IADQTALRVPS True H1975_Epitope_Rep1 1169.6404363946099 1169.6393299358601 34.896 2 -0.8853547510743874 0.26740255550724434 1.0 ['ENSG00000163424|ENST00000295622|TEX55'] 15859 4585 EDLRTKLTD True PC9_epitope_Rep4 1089.5666027480102 1089.56550993586 24.133 2 -0.8853592598142983 0.26740255550724434 1.0 ['nc|ENSG00000176049|Q96AA8-2|JAKMIP2', 'nc|ENSG00000176049|Q96AA8|JAKMIP2', 'ENSG00000176049|ENST00000616793|JAKMIP2'] 54634 15041 LADMIVEEEVP True PC9_epitope_Rep3 1243.60060529823 1243.5995099358602 62.984 2 -0.885369131164421 0.26740255550724434 1.0 ['nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENSG00000048342|ENST00000424120|CC2D2A'] 26182 15152 FHSDPQHWL True PC9_epitope_Rep5 1165.53049202281 1165.52938993586 63.289 2 -0.885414781389681 0.26740255550724434 1.0 ['ENSG00000182795|ENST00000359470|C1orf116', 'nc|ENSG00000182795|Q9BW04-2|SARG'] 134733 4722 WWWIWWQWWK True NCI_RA007_Epitope_Rep2 1689.8033598291297 1689.8017049037903 22.996 3 -0.8854631885907559 0.26740255550724434 1.0 ['chr12:54282841-54283827|502|22.89|0.0|21.13|+|1|HNRNPA1,HNRNPA1|1'] 41497 20111 ICQQDRNWSGQ True PC9_epitope_Rep3 1333.58333252465 1333.5822299358601 82.608 2 -0.8854918425154522 0.26740255550724434 1.0 ['CSMD3|p.H2861R|1|0.39|ENSG00000164796|chr8:112295865-112295865|T/C|missense_variant'] 117237 18308 TYVTILPEL True NCI_RA007_Epitope_Rep5 1047.58521293427 1047.5841099358602 77.223 2 -0.8854968170385268 0.26740255550724434 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'ENST00000472697.5_1_3:142095319-142144369:-|nuORF'] 74864 8814 NLQLNQETEAI True NCI_RA007_Epitope_Rep4 1271.63574493699 1271.6346499358601 40.713 2 -0.8855300721488008 0.26740255550724434 1.0 ['nc|ENSG00000165983|Q96BW5-2|PTER', 'ENSG00000165983|ENST00000535784|PTER'] 122908 9269 VGVRVSCS True PC9_epitope_Rep3 805.4116227600899 805.41052993586 40.597 2 -0.8855463077914568 0.26741185380494237 1.0 ['ENST00000338244.5_1_20:4835185-4835350:-|nuORF'] 122302 23239 VGRTRFLRA True PC9_epitope_Rep3 1074.6410455312998 1074.6399499358602 94.663 2 -0.8855671706370837 0.26741185380494237 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 117490 9236 VAELLEPP True PC9_epitope_Rep1 866.4749342092999 866.47382993586 40.378 2 -0.8855712324674629 0.26741185380494237 1.0 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 99009 19528 SKMDPMSLESL True PC9_epitope_Rep6 1236.5730106514 1236.57190993586 87.777 2 -0.8855822365797339 0.26741185380494237 1.0 ['ENSG00000088854|ENST00000252032|DNAAF9'] 68712 10265 LVDEEYELYQD True H1975_Epitope_Rep2 1414.6140064329 1414.61236490379 44.49 3 -0.8856295106185863 0.26741185380494237 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'PATJ|p.P937Rfs*9|2|0.25|ENSG00000132849|chr1:61864607-61864607|C/-|frameshift_variant', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 3579 16319 AGPELQLLS True PC9_epitope_Rep1 926.5072969667399 926.50618993586 67.589 2 -0.8857093158103133 0.26743615275654603 1.0 ['nc|ENSG00000177614|Q8N414-2|PGBD5'] 5632 5752 APAEQFRGSKR True PC9_epitope_Rep1 1245.65781779425 1245.65617490379 26.942 3 -0.8857966735103685 0.2674389251956357 1.0 ['ENSG00000111752|ENST00000544916|PHC1'] 79330 19566 PGKREPLRSVL True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74480993586 82.154 2 -0.8858054366554636 0.2674389251956357 1.0 ['ENSG00000182170|ENST00000332314|MRGPRG'] 29013 23195 FTISIFGVLE True PC9_epitope_Rep4 1124.61176203528 1124.6106699358602 97.45 2 -0.8858061605405135 0.2674389251956357 1.0 ['MC2R|p.V37F|1|0.3|ENSG00000185231|chr18:13885410-13885410|C/A|missense_variant'] 55960 14604 LDIDECRYGYC True NCI_RA007_Epitope_Rep3 1348.54277315228 1348.54166993586 64.787 2 -0.8858595379584587 0.2674594715880406 1.0 ['ENSG00000140092|ENST00000342058|FBLN5'] 44048 19646 ILLFRRPLPK True H1975_Epitope_Rep1 1251.8179472641098 1251.81631490379 81.782 3 -0.8858887390666885 0.2674594715880406 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 127500 8610 VQTRRQHSL True H1975_Epitope_Rep3 1123.62103836271 1123.6199499358602 38.11 2 -0.8859183062381002 0.267462242851734 1.0 ['ENST00000398117.1_1_18:60792389-60792626:-|nuORF'] 137245 19968 YLFFKDRYFWR True PC9_epitope_Rep1 1639.8299684997896 1639.82833490379 81.631 3 -0.8859260967906436 0.267462242851734 1.0 ['ENSG00000166670|ENST00000279441|MMP10'] 61910 25468 LLLLKMLMI True PC9_epitope_Rep1 1086.69088138646 1086.68978993586 102.95 2 -0.8859375057724395 0.267462242851734 1.0 ['Tigger1_dup9834|chr14:19106484-19106883:-|1.044883763241324|0.2064126540684672|2.34|491.0|14|1|anti-sense', 'Tigger1_dup11946|chr22:15828868-15829349:-|1.0861641370613664|0.126984307270513|3.1|495.0|22|2|anti-sense'] 1162 3972 AEASRWHR True H1975_Epitope_Rep2 1011.4998606008701 1011.49876993586 20.348 2 -0.8859771783889999 0.2674650138822672 1.0 ['nc|ENSG00000078795|Q9NZM6-4|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-3|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-6|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-2|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-7|PKD2L2', 'nc|ENSG00000078795|Q9NZM6-5|PKD2L2', 'ENSG00000078795|ENST00000508883|PKD2L2'] 56450 19653 LDSQKHIDFS True PC9_epitope_Rep3 1188.5775017848798 1188.57640993586 80.831 2 -0.8859821366214139 0.2674650138822672 1.0 ['ENSG00000170889|ENST00000302907|RPS9', 'ENST00000402367.5_1_19:54711128-54711440:+|nuORF', 'ENST00000495002.5_1_19:54710350-54711440:+|nuORF'] 69984 5479 LYEYLDIKCVP True NCI_RA007_Epitope_Rep1 1354.6842753525398 1354.68262490379 25.382 3 -0.8859921095207968 0.2674650138822672 1.0 ['ENSG00000258484|ENST00000310673|SPESP1'] 48323 8348 KDRGDLNRII True NCI_RA007_Epitope_Rep4 1198.67821888566 1198.6765649037902 38.925 3 -0.8860491715609232 0.2675098503863034 1.0 ['ENSG00000176769|ENST00000368642|TCERG1L', 'ENST00000483040.1_1_10:132891427-132954311:-|nuORF'] 80732 8736 PLRLHSEK True H1975_Epitope_Rep1 978.5610638751 978.55996993586 38.531 2 -0.8861575294402603 0.2675098503863034 1.0 ['ENSG00000128917|ENST00000249749|DLL4'] 119022 15007 VEGAFSPLHP True PC9_epitope_Rep1 1052.52909504048 1052.5279899358602 62.545 2 -0.88616680131121 0.2675098503863034 1.0 ['ENST00000307145.3_2_15:31665110-31665245:+|nuORF'] 56677 8373 LEAATRVGAV True PC9_epitope_Rep5 985.5556441414899 985.55454993586 37.149 2 -0.886204316568953 0.26752012114753637 1.0 ['ENSG00000140961|ENST00000393306|OSGIN1'] 107902 12318 TAVFKRVL True PC9_epitope_Rep5 932.5807366905199 932.5801849679301 52.372 1 -0.8862631697775729 0.2675827257431296 1.0 ['RNF121-PPP6R3|2|fusion', 'nc|ENSG00000110075|Q5H9R7-5|PPP6R3'] 61666 18710 LLHPPPLSL True PC9_epitope_Rep1 985.59605240149 985.59494993586 76.757 2 -0.8862879668407345 0.2675827257431296 1.0 ['ENST00000583260.1_1_17:62009328-62009508:-|nuORF'] 79897 22491 PILVMKFI True PC9_epitope_Rep5 959.58779621691 959.58668993586 91.515 2 -0.8863423673281385 0.2676070161663465 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 108789 22715 TEQELMEQLEH True PC9_epitope_Rep3 1385.61329524025 1385.6121899358602 92.642 2 -0.8865065927860927 0.2676415742467367 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1'] 12096 6915 DIFKKKEV True NCI_RA007_Epitope_Rep4 1005.5858816406098 1005.58478993586 33.216 2 -0.8865379711228345 0.2676415742467367 1.0 ['nc|ENSG00000157657|Q5T7W0-2|ZNF618'] 45933 7283 ISSAIQLLEDP True H1975_Epitope_Rep3 1184.6288686514 1184.6277699358602 32.988 2 -0.8865709980890704 0.26765184229712297 1.0 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 91174 9924 RLPTPEQI True PC9_epitope_Rep2 952.5341804209199 952.53308993586 43.504 2 -0.8865942382546238 0.2676621100595864 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 24864 16338 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 68.319 2 -0.8866419217350548 0.267672377534139 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 21194 5669 EREWEAREREL True H1975_Epitope_Rep1 1501.72735390605 1501.72570490379 26.875 3 -0.8866915069156868 0.267706931359354 1.0 ['ENSG00000170776|ENST00000394518|AKAP13', 'nc|ENSG00000170776|Q12802-4|AKAP13', 'nc|ENSG00000170776|Q12802-2|AKAP13'] 74558 17466 NLCTSILRLV True PC9_epitope_Rep5 1130.64816462734 1130.6465249037901 72.183 3 -0.8867067836144773 0.267706931359354 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 103847 15802 SRIPFNQAL True PC9_epitope_Rep3 1044.5716285588 1044.5705299358601 65.937 2 -0.8867422351082369 0.26772746390018226 1.0 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'ENST00000475700.1_1_1:112303610-112303748:+|nuORF'] 93222 12360 RRRRRRPPPRR True NCI_RA007_Epitope_Rep4 1557.9777444190497 1557.97609490379 54.54 3 -0.8867449410333479 0.26772746390018226 1.0 ['ENST00000533683.6_2_19:14201006-14201489:-|nuORF'] 13035 12741 DLQTQLSHEI True H1975_Epitope_Rep2 1182.5880664685799 1182.58696993586 54.112 2 -0.8869042690147301 0.26780031682391037 1.0 ['ENSG00000102978|ENST00000219252|POLR2C'] 32078 7898 GEWRETPRKQK True NCI_RA007_Epitope_Rep1 1413.7476954278097 1413.7465899358601 34.714 2 -0.8869133178675196 0.26780031682391037 1.0 ['nc|ENSG00000181896|Q8IZC7-2|ZNF101', 'ENSG00000181896|ENST00000592502|ZNF101'] 109852 6681 THLYCEPPA True PC9_epitope_Rep5 1029.45896687533 1029.4578699358601 30.67 2 -0.8869726786319538 0.26780031682391037 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3'] 3629 11743 AGPTAHELAV True PC9_epitope_Rep1 964.4977949121999 964.49668993586 50.043 2 -0.8870927571360753 0.2678245997700956 1.0 ['ENSG00000135966|ENST00000393359|TGFBRAP1'] 87498 24505 QTGQPRRGAP True H1975_Epitope_Rep1 1066.5631891334199 1066.56208993586 101.56 2 -0.8872344717674284 0.2678629003995234 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|91|3|anti-sense'] 52702 16262 KQKLLLKKRHI True H1975_Epitope_Rep2 1403.94527303555 1403.9436149037901 67.762 3 -0.8873145319593099 0.26788718178759674 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 26435 23219 FILILTVYTFK True PC9_epitope_Rep2 1356.8057108145597 1356.80460993586 94.793 2 -0.8874171466618759 0.2679497602960554 1.0 ['ENST00000478361.6_1_10:94234505-94239065:-|nuORF'] 30754 8351 GAPAETAVAA True PC9_epitope_Rep5 856.4290466460399 856.4279499358599 37.063 2 -0.8874419021653941 0.2679497602960554 1.0 ['ENST00000573331.5_1_17:7297739-7306647:-|nuORF'] 79328 19839 PGKREPLRSVL True H1975_Epitope_Rep3 1250.7459045226599 1250.74480993586 83.062 2 -0.8875334551699802 0.26800207460155034 1.0 ['ENSG00000182170|ENST00000332314|MRGPRG'] 115740 16894 TVLLADHL True PC9_epitope_Rep1 880.5018176634801 880.50072993586 69.808 2 -0.8876117674562822 0.26803661288739994 1.0 ['ENSG00000130054|ENST00000252338|NALF2'] 45549 4752 ISGFQGMNLP True H1975_Epitope_Rep3 1062.51681610462 1062.51570993586 23.405 2 -0.8876153079998887 0.26803661288739994 1.0 ['ENSG00000229183|ENST00000378149|PGA4', 'ENSG00000229859|ENST00000325558|PGA3'] 13789 4881 DQSEQEKQERL True H1975_Epitope_Rep3 1388.65318590628 1388.6520899358602 23.9 2 -0.8876600163470373 0.2680468728098455 1.0 ['nc|ENSG00000198863|Q96C34-2|RUNDC1', 'ENSG00000198863|ENST00000361677|RUNDC1'] 128953 21843 VSVKNNLTTK True PC9_epitope_Rep6 1102.63462273818 1102.63352993586 96.921 2 -0.8876720926620316 0.26807114923678566 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 81982 9737 PSSALSHQGWK True NCI_RA007_Epitope_Rep1 1196.59382055536 1196.59272993586 41.876 2 -0.8876945866099728 0.26808140838753086 1.0 ['nc|ENSG00000231028|P0C7V0|AHI1-DT'] 118383 18596 VDKARKRHHRR True NCI_RA007_Epitope_Rep5 1457.85522924453 1457.85412993586 78.345 2 -0.8877094143287113 0.2680916672506833 1.0 ['ENST00000488757.5_1_6:29644775-29644817:-|nuORF'] 35107 15674 GRRRLHLFGRD True PC9_epitope_Rep5 1381.7803329687697 1381.77922993586 65.301 2 -0.8877563845883857 0.2680944104950384 1.0 ['ENSG00000145388|ENST00000388822|METTL14'] 66638 14267 LSSRLRLDPV True H1975_Epitope_Rep1 1154.6771562565 1154.6760499358602 60.063 2 -0.8877752536639094 0.2680944104950384 1.0 ['ENSG00000158008|ENST00000374280|EXTL1'] 80904 7025 PLYSQKRYEEI True NCI_RA007_Epitope_Rep1 1424.729979675 1424.72833490379 31.323 3 -0.8877802182055572 0.2680944104950384 1.0 ['ENST00000451469.1_1_3:39400337-39400661:+|nuORF'] 119889 16807 VEVVLSAL True PC9_epitope_Rep1 828.4956696538799 828.49456993586 69.472 2 -0.8878120470434016 0.2681046686008213 1.0 ['ENSG00000115825|ENST00000234179|PRKD3', 'nc|ENSG00000115825|O94806-2|PRKD3', 'ENST00000494667.5_1_2:37496701-37543667:-|nuORF'] 111472 12018 TLLGQDHI True PC9_epitope_Rep5 895.4763311916299 895.4752299358599 51.222 2 -0.887947735569837 0.2682082545021372 1.0 ['nc|ENSG00000285231|A0A2R8YFM6|OOSP3'] 118329 10469 VDESLFDWNVK True NCI_RA007_Epitope_Rep2 1350.6455813446998 1350.64448993586 45.315 2 -0.8879737961180646 0.2682082545021372 1.0 ['ENSG00000215218|ENST00000399816|UBE2QL1'] 133894 16873 WNDILERCL True PC9_epitope_Rep4 1160.5648289261999 1160.56318490379 72.883 3 -0.8879784317384394 0.2682082545021372 1.0 ['ENST00000265085.9_1_5:173371996-173372116:+|nuORF'] 36633 3126 GVLNSKFPHYE True NCI_RA007_Epitope_Rep2 1289.64043639461 1289.63878490379 16.786 3 -0.8879908931029729 0.2682082545021372 1.0 ['nc|ENSG00000172009|P52888-2|THOP1'] 39284 10838 HLPLPEQI True H1975_Epitope_Rep3 945.5283667644901 945.52726993586 46.769 2 -0.8879971681757541 0.2682082545021372 1.0 ['ENSG00000149262|ENST00000534064|INTS4'] 110486 6363 TIPSPYHAS True NCI_RA007_Epitope_Rep3 971.47124581119 971.47014993586 32.03 2 -0.8880012064808973 0.2682082545021372 1.0 ['DCAF4L2|p.P357H|1|0.14|ENSG00000176566|chr8:87872902-87872902|G/T|missense_variant'] 116363 11337 TVYERWWYEKL True NCI_RA007_Epitope_Rep1 1571.7772642205898 1571.77616993586 48.069 2 -0.8881063667635853 0.2682605527215651 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 71645 12532 MLQRREELF True PC9_epitope_Rep4 1220.6335771923598 1220.6324699358602 56.023 2 -0.8882252484824983 0.26830908938030773 1.0 ['MYH8|p.A813E|1|0.24|ENSG00000133020|chr17:10404580-10404580|G/T|missense_variant'] 76359 14779 NSFEFQKNL True PC9_epitope_Rep4 1125.5454733806098 1125.54436993586 64.778 2 -0.8882307770223657 0.26830908938030773 1.0 ['ENST00000541657.5_3_12:122240528-122240576:-|nuORF', 'ENST00000429892.5_1_12:122239709-122240576:-|nuORF'] 121617 4786 VGLEEIGGRR True NCI_RA007_Epitope_Rep4 1084.5989059357998 1084.5978099358601 24.845 2 -0.888254330389196 0.26831934304012106 1.0 ['ENST00000538697.1_1_12:6677210-6677375:-|nuORF'] 113256 4388 TQENLNQQYQK True H1975_Epitope_Rep3 1392.66335666716 1392.66224993586 21.999 2 -0.8882611788520499 0.26832959641255605 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant'] 57597 17619 LELKKHLL True NCI_RA007_Epitope_Rep5 992.6382515666401 992.63714993586 74.553 2 -0.8883259047552341 0.26835932573878685 1.0 ['ENSG00000171169|ENST00000373078|NAIF1', 'nc|ENSG00000171169|Q69YI7-2|NAIF1'] 3145 6115 AGDTIRLEA True H1975_Epitope_Rep3 944.4927095317598 944.4921649679301 28.533 1 -0.8883687569232233 0.26835932573878685 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 15036 8183 EAAAVVLQ True H1975_Epitope_Rep3 799.4439684341899 799.44286993586 36.456 2 -0.8883901014857396 0.26835932573878685 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.H598Tfs*38|1|0.13|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant', 'IRS1|p.Q1064Tfs*17|1|0.18|ENSG00000169047|chr2:226795553-226795554|-/C|frameshift_variant'] 55918 10498 LDGSKRRRLT True NCI_RA007_Epitope_Rep2 1200.7051023398399 1200.70400993586 45.429 2 -0.8884071350706431 0.26835932573878685 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF', 'ENST00000541061.1_1_4:110897303-110898417:+|nuORF'] 124520 15062 VLFSTHTL True PC9_epitope_Rep1 916.50181766348 916.50072993586 62.754 2 -0.8884758682978826 0.26835932573878685 1.0 ['ENSG00000197859|ENST00000651351|ADAMTSL2'] 70164 20743 LYLFIVMPL True PC9_epitope_Rep4 1107.6402257125899 1107.6391299358602 87.952 2 -0.8884810418680908 0.26835932573878685 1.0 ['ENST00000503335.6_1_5:126626657-126667083:+|nuORF', 'ENST00000418761.6_1_5:126626657-126667083:+|nuORF'] 15278 10843 EAGVTGIRRW True H1975_Epitope_Rep1 1143.61489035311 1143.61378993586 46.666 2 -0.8885057343297369 0.26835932573878685 1.0 ['RC3H2|p.R156Pfs*98|1|0.31|ENSG00000056586|chr9:122890428-122890429|-/G|frameshift_variant'] 131371 12524 VVSIQDITVNY True H1975_Epitope_Rep2 1249.65541775241 1249.65432993586 53.267 2 -0.8885469516184799 0.2683658170914543 1.0 ['ENSG00000156232|ENST00000286760|WHAMM'] 116107 20087 TVSLNKNKQL True PC9_epitope_Rep4 1143.66117183919 1143.66006993586 85.397 2 -0.8885517689604762 0.2683658170914543 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 97049 7248 SEYFYQEEFYI True NCI_RA007_Epitope_Rep3 1516.63982725792 1516.63872993586 35.619 2 -0.8885733368274723 0.2683723080803127 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 34195 11211 GPGTGFLYL True PC9_epitope_Rep5 923.4752685624699 923.47416993586 48.111 2 -0.8885783289293343 0.2683723080803127 1.0 ['nc|ENSG00000136986|Q9BUN8-2|DERL1', 'ENSG00000136986|ENST00000259512|DERL1'] 111120 21186 TLELRQRLLQ True PC9_epitope_Rep4 1268.75646920636 1268.75536993586 89.655 2 -0.8886685961375934 0.26840682050635395 1.0 ['ENST00000585104.1_1_17:62477530-62481889:-|nuORF'] 25425 14433 FELCPSEASPY True H1975_Epitope_Rep2 1241.52744035797 1241.52634993586 60.67 2 -0.8886742096862488 0.26840682050635395 1.0 ['ENSG00000172071|ENST00000303236|EIF2AK3'] 112941 8743 TPRNNISL True PC9_epitope_Rep5 913.4981292653699 913.49702993586 38.572 2 -0.8886865683301575 0.26842732049036777 1.0 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 108782 8074 TEPWDRTNP True PC9_epitope_Rep5 1114.50433684462 1114.5032299358602 35.995 2 -0.8887270098020157 0.26842732049036777 1.0 ['ENST00000444199.1_1_19:55208384-55209490:+|nuORF'] 16111 12786 EEEDERDQRGY True PC9_epitope_Rep3 1424.5804148888399 1424.57930993586 54.202 2 -0.8887561249898525 0.26845158036314726 1.0 ['nc|ENSG00000283154|P0DPB3-2|SCHIP1', 'ENSG00000283154|ENST00000638749|IQCJ-SCHIP1', 'nc|ENSG00000283154|B3KU38-2|IQCJ-SCHIP1', 'nc|ENSG00000283154|B3KU38|IQCJ-SCHIP1'] 111284 12688 TLHELLERI True PC9_epitope_Rep1 1122.6397081186199 1122.63805490379 53.676 3 -0.8888020999871128 0.2684720782313878 1.0 ['SASH3|p.L266M|1|0.44|ENSG00000122122|chrX:129792831-129792831|C/A|missense_variant', 'ENSG00000122122|ENST00000356892|SASH3'] 59205 14444 LGGACGAGGY True H1975_Epitope_Rep1 824.34868815036 824.34813496793 60.755 1 -0.8888364740868889 0.2684720782313878 1.0 ['CON__Q922U2'] 23140 6668 EVNDRQGFVP True PC9_epitope_Rep2 1159.5621860739097 1159.56108993586 31.053 2 -0.8888875077730284 0.2684925749509667 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 36527 18535 GVKMWHLVKN True PC9_epitope_Rep2 1210.6644833978198 1210.66282490379 76.645 3 -0.8888875774032065 0.2684925749509667 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'nc|ENSG00000221866|Q9HCM2-4|PLXNA4'] 54620 8064 LADKVNSSWQR True H1975_Epitope_Rep1 1302.66804812478 1302.6669499358602 35.961 2 -0.8889399475548375 0.26855509792384635 1.0 ['ENSG00000147471|ENST00000328195|PLPBP'] 115449 16452 TVFMWVSM True PC9_epitope_Rep5 999.4557960711899 999.45468993586 68.28 2 -0.8889469589957906 0.26855509792384635 1.0 ['nc|ENSG00000060688|Q96DI7-2|SNRNP40'] 19194 10943 ELKLHLQASK True H1975_Epitope_Rep3 1165.68190728377 1165.68080993586 47.179 2 -0.8890022907701457 0.26856534468991217 1.0 ['ENSG00000115993|ENST00000332624|TRAK2'] 10836 6622 DAIKSLWNDPG True H1975_Epitope_Rep1 1214.59315184902 1214.5920499358601 30.527 2 -0.889052708742929 0.26858959991034403 1.0 ['ENSG00000156052|ENST00000286548|GNAQ'] 25037 26916 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 115.11 2 -0.8890609510699559 0.26859232073066525 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 69351 4235 LVQAEYWHDP True NCI_RA007_Epitope_Rep4 1256.5825871653199 1256.5814899358602 22.605 2 -0.8890626465173624 0.26859232073066525 1.0 ['nc|ENSG00000131238|P50897-2|PPT1', 'ENSG00000131238|ENST00000642050|PPT1'] 120928 15791 VGEGLLLK True PC9_epitope_Rep3 827.5116540711899 827.51054993586 65.896 2 -0.8891064413904842 0.26859232073066525 1.0 ['ENST00000488234.1_1_2:84660404-84668204:-|nuORF'] 14026 3915 DSALITLEDP True H1975_Epitope_Rep3 1072.52882025696 1072.5277299358602 20.18 2 -0.8891809986213831 0.2686305821706729 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 81025 9963 PNVTKDVAL True PC9_epitope_Rep5 955.5338460677499 955.53274993586 43.298 2 -0.8892660028979494 0.26867532322001375 1.0 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF', 'ENST00000494614.5_1_3:98520348-98531278:-|nuORF'] 23324 12244 EVTDKYFH True H1975_Epitope_Rep3 1037.48181049489 1037.4807099358602 52.271 2 -0.8893032264293866 0.26867532322001375 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1'] 120629 16124 VGAIMVPL True H1975_Epitope_Rep2 798.4673467310599 798.46679496793 67.234 1 -0.8893097507086493 0.26867532322001375 1.0 ['ENST00000373036.4_1_1:38323346-38325272:-|nuORF'] 44292 7807 ILWHTMKNYYR True H1975_Epitope_Rep1 1523.77073937151 1523.76910490379 34.984 3 -0.8893887710148262 0.26869957418198115 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 97336 18297 SFVSFNIVQ True PC9_epitope_Rep3 1039.53384606775 1039.53274993586 75.584 2 -0.8894136670576669 0.2687098174891096 1.0 ['ENST00000559350.5_1_15:60682514-60683267:-|nuORF'] 61001 5422 LLALHSAA True PC9_epitope_Rep4 794.4650382319401 794.46394993586 27.587 2 -0.8894303295444258 0.2687200605092865 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 39893 16655 HQKIIEEA True PC9_epitope_Rep5 966.5134449763399 966.51234993586 69.069 2 -0.8894691160521218 0.26872549019607844 1.0 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA', 'MCCC1|p.R281L|1|0.49|ENSG00000078070|chr3:183057342-183057342|C/A|missense_variant', 'ENST00000495767.5_1_3:182740340-182790239:-|nuORF', 'FXR1-MCCC1|1|fusion', 'ENSG00000078070|ENST00000265594|MCCC1'] 115116 7872 TTWYHRHYWGE True PC9_epitope_Rep1 1534.6741961343798 1534.6730899358602 35.105 2 -0.8894995424066614 0.26872549019607844 1.0 ['nc|ENSG00000163518|Q96PJ5-2|FCRL4', 'ENSG00000163518|ENST00000271532|FCRL4'] 128054 25470 VRRLKVSK True NCI_RA007_Epitope_Rep3 984.6556329662799 984.6550849679301 110.11 1 -0.8895232999192552 0.26872549019607844 1.0 ['ENST00000466078.1_1_13:33222909-33223050:+|nuORF'] 57034 7154 LEEEVSKNLTK True H1975_Epitope_Rep1 1288.6874461566797 1288.68634993586 32.541 2 -0.8895258885187456 0.26872549019607844 1.0 ['ENSG00000162745|ENST00000294794|OLFML2B'] 126471 2745 VPLTWRCDR True H1975_Epitope_Rep2 1144.5811476966799 1144.5795149037901 14.597 3 -0.8895448537640112 0.26872549019607844 1.0 ['ENST00000598299.1_1_19:8369870-8373174:-|nuORF', 'ENSG00000167775|ENST00000301458|CD320', 'ENST00000596002.5_1_19:8368843-8370161:-|nuORF'] 129743 15270 VTKKKKIGKKK True PC9_epitope_Rep6 1284.8969258607997 1284.8952749037899 70.849 3 -0.88956349545161 0.26872549019607844 1.0 ['nc|ENSG00000116786|Q8IWE5-2|PLEKHM2', 'ENSG00000116786|ENST00000375799|PLEKHM2'] 109077 13157 TFENYYRKQRR True H1975_Epitope_Rep3 1559.7957082493897 1559.79460993586 55.858 2 -0.8895914723739854 0.26873468244520693 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 123519 15730 VIHRLQLI True PC9_epitope_Rep4 990.6338348925399 990.63272993586 68.431 2 -0.8896275996659644 0.26873468244520693 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'nc|ENSG00000172901|Q6Q4G3-2|LVRN', 'nc|ENSG00000172901|Q6Q4G3-3|LVRN'] 10518 12102 CPFGENCF True NCI_RA007_Epitope_Rep3 915.3255101776299 915.32440993586 54.721 2 -0.8896538108706152 0.26873468244520693 1.0 ['nc|ENSG00000238222|Q13434|MKRN4P'] 137891 6717 YPNSGSVSA True PC9_epitope_Rep2 880.39266113732 880.3921149679301 31.248 1 -0.8896595024033684 0.26873468244520693 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 25036 26421 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 112.18 2 -0.889674163040504 0.26873468244520693 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 22538 6685 ETLLHQVEELR True H1975_Epitope_Rep2 1365.7252286477299 1365.72358490379 30.624 3 -0.8897295712846274 0.2687589278211915 1.0 ['CEP128|p.E834Kfs*17|1|0.31|ENSG00000100629|chr14:80761490-80761490|C/-|frameshift_variant', 'nc|ENSG00000100629|Q6ZU80-1|CEP128', 'ENSG00000100629|ENST00000555265|CEP128', 'nc|ENSG00000100629|Q6ZU80-3|CEP128', 'CEP128|p.M633Nfs*17|2|0.24|ENSG00000100629|chr14:80785208-80785209|-/T|frameshift_variant'] 66367 10776 LSQWLEEMPCV True H1975_Epitope_Rep1 1333.60464513285 1333.6035499358602 46.413 2 -0.8897328429844031 0.26876916828882325 1.0 ['ENSG00000135569|ENST00000258034|TAAR5'] 95706 19054 SAYHHSIF True PC9_epitope_Rep3 960.44536541652 960.44426993586 78.513 2 -0.8897807938183993 0.26877940846963927 1.0 ['ENST00000263277.7_1_19:48246012-48246210:+|nuORF'] 63151 13710 LNRQHSQRIR True H1975_Epitope_Rep3 1306.73304842318 1306.73194993586 58.032 2 -0.8898127397539017 0.26878964836365166 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 46151 5646 ITCAGDEK True H1975_Epitope_Rep1 835.37456854503 835.37346993586 26.785 2 -0.8898810264329634 0.2688203663249874 1.0 ['ENSG00000154114|ENST00000683345|TBCEL', 'ENST00000530362.1_1_11:120916486-120918484:+|nuORF'] 77755 4027 PAARAPAEEEV True PC9_epitope_Rep1 1138.56185172074 1138.56074993586 20.393 2 -0.8898871124980503 0.2688203663249874 1.0 ['ENST00000595692.1_1_19:7679981-7682940:+|nuORF', 'ENSG00000076826|ENST00000160298|CAMSAP3', 'nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3'] 15219 13213 EAFSGEPFNLH True PC9_epitope_Rep1 1246.56185172074 1246.56074993586 55.687 2 -0.8898934138520532 0.2688203663249874 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1'] 38954 11771 HISLFYSPAL True PC9_epitope_Rep4 1146.60734536118 1146.60568490379 53.044 3 -0.8899387194678833 0.26883060507190565 1.0 ['ENST00000473581.5_1_X:48834665-48847670:-|nuORF'] 122714 23898 VGTYWKRLM True PC9_epitope_Rep4 1152.6113851958 1152.61087496793 100.37 1 -0.8899610254504976 0.26884084353208054 1.0 ['ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 98176 9540 SIDLLEDVFS True H1975_Epitope_Rep3 1136.56012038524 1136.55902993586 41.703 2 -0.889971335789061 0.26887908702653507 1.0 ['ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A'] 12680 14729 DLETKKFRFEE True H1975_Epitope_Rep1 1440.72489429456 1440.7237899358602 61.876 2 -0.890046119533673 0.2688995617290001 1.0 ['ENSG00000148400|ENST00000651671|NOTCH1'] 69248 5986 LVNQPPHS True PC9_epitope_Rep6 890.4610154806601 890.45990993586 31.344 2 -0.8900774692613047 0.2688995617290001 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 77475 10796 NYPFVLWEDLC True NCI_RA007_Epitope_Rep1 1397.6325741328499 1397.6314699358602 45.988 2 -0.8901275304331744 0.26892380072250693 1.0 ['ENST00000371380.7_1_10:95790651-95790705:+|nuORF'] 61768 15685 LLKERQKDLKF True NCI_RA007_Epitope_Rep2 1416.8452842107597 1416.8441899358602 65.727 2 -0.8901545009903294 0.2689302716325959 1.0 ['ENSG00000112237|ENST00000520429|CCNC', 'ENST00000523639.5_1_6:99998829-100016472:-|nuORF', 'ENST00000523541.1_1_6:100010703-100016412:-|nuORF'] 22355 5148 ETELYDYYYYK True H1975_Epitope_Rep3 1548.66604200576 1548.66439490379 24.905 3 -0.8901758351450367 0.2689302716325959 1.0 ['COL24A1|p.E476K|1|0.55|ENSG00000171502|chr1:86124910-86124910|C/T|missense_variant'] 48182 17808 KAVGPKGNIL True PC9_epitope_Rep2 995.6127650947899 995.61166993586 73.791 2 -0.8902103158479586 0.26894050769381556 1.0 ['ENST00000596658.1_1_19:50433558-50434160:+|nuORF'] 78358 6787 PATPTQTVVR True NCI_RA007_Epitope_Rep4 1068.5927579262 1068.5916699358602 32.727 2 -0.8902441887275556 0.2689647447565176 1.0 ['ENSG00000221916|ENST00000408991|C19orf73'] 2852 4720 AEWCEFTP True H1975_Epitope_Rep1 981.3902186091699 981.38912993586 23.208 2 -0.8903732010918225 0.2690309844167845 1.0 ['ENSG00000168907|ENST00000397272|PLA2G4F', 'nc|ENSG00000168907|Q68DD2-3|PLA2G4F'] 46702 7935 ITYGNECHLC-[Carbamidomethyl] True H1975_Epitope_Rep1 1208.4954293164699 1208.4943299358602 35.471 2 -0.8904237331905658 0.2690692204301075 1.0 ['ENSG00000145879|ENST00000274565|SPINK7'] 92121 16311 RPYRFYFYMWK True NCI_RA007_Epitope_Rep2 1655.8071248802296 1655.8060299358601 68.175 2 -0.8904351960827771 0.2690756867247221 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17'] 26265 19023 FICLFWYQ True PC9_epitope_Rep5 1118.52592423634 1118.52482993586 78.199 2 -0.8904426042603427 0.2690756867247221 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|332|3|anti-sense'] 82687 20239 PVNTFSLFD True PC9_epitope_Rep2 1038.5022115862998 1038.5016749679298 83.268 1 -0.8904701715780289 0.2690859198902376 1.0 ['ENST00000532094.5_1_11:420655-431830:-|nuORF', 'ENST00000528927.5_1_11:418373-431830:-|nuORF', 'nc|ENSG00000185101|A1A5B4-2|ANO9', 'ENST00000534161.5_1_11:418373-429524:-|nuORF', 'ENSG00000185101|ENST00000332826|ANO9', 'ENST00000526142.5_1_11:419653-429752:-|nuORF'] 119769 12762 VETWPWQV True PC9_epitope_Rep2 1043.50763131991 1043.50652993586 54.395 2 -0.8904855603846542 0.26911015288122303 1.0 ['ENSG00000013583|ENST00000014930|HEBP1'] 12336 7965 DIVLQNNV True PC9_epitope_Rep6 913.4868958753301 913.48578993586 40.094 2 -0.8905208155959986 0.26912684968711065 1.0 ['CHRNG|p.E115Q|1|0.17|ENSG00000196811|chr2:232540704-232540704|G/C|missense_variant'] 24974 26891 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 117.76 2 -0.8905358624946207 0.26912684968711065 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 27438 22087 FNLMINKYF True PC9_epitope_Rep5 1188.6001518057599 1188.5990499358602 89.987 2 -0.8905632527543856 0.26912684968711065 1.0 ['ENSG00000205413|ENST00000379958|SAMD9'] 102363 15096 SPVGNPQLI True PC9_epitope_Rep3 923.5076313199099 923.50652993586 63.202 2 -0.8906620254629076 0.2691753111307099 1.0 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 127530 9224 VQVGNLHSL True PC9_epitope_Rep1 965.5294293936499 965.52832993586 40.332 2 -0.8906642752475122 0.2691753111307099 1.0 ['MYPN|p.A320V|1|0.31|ENSG00000138347|chr10:68142996-68142996|C/T|missense_variant'] 4677 5086 ALDFHNVL True NCI_RA007_Epitope_Rep5 927.48141657207 927.48030993586 26.263 2 -0.8907080728165397 0.2691855418988157 1.0 ['ENST00000339431.8_1_7:102585067-102585361:+|nuORF'] 91022 26463 RLKQKIKVLKK True NCI_RA007_Epitope_Rep1 1380.9656741269598 1380.96403490379 109.53 3 -0.8907491910278176 0.26919577238048575 1.0 ['ENST00000481507.5_1_9:37326993-37357262:+|nuORF', 'ENSG00000147905|ENST00000336755|ZCCHC7'] 55099 18673 LALPGTVLQQ True PC9_epitope_Rep4 1038.60734536118 1038.6062499358602 79.906 2 -0.8908026139115086 0.26922646210700185 1.0 ['ENST00000555220.5_1_14:64971335-64971530:-|nuORF'] 56415 8422 LDSGDLARF True NCI_RA007_Epitope_Rep2 992.4927095317599 992.49160993586 37.401 2 -0.890825224514846 0.26922646210700185 1.0 ['ENSG00000162639|ENST00000651461|HENMT1'] 41705 10018 IDLPPSKNRRE True H1975_Epitope_Rep3 1323.72589735407 1323.72480993586 43.572 2 -0.8908517608719713 0.26922646210700185 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'ENST00000475602.1_1_X:123227886-123229311:+|nuORF'] 61432 20805 LLESSRTLP True PC9_epitope_Rep3 1014.57095985246 1014.56986993586 85.298 2 -0.890939931869234 0.2692889137737962 1.0 ['nc|ENSG00000134324|Q14693-6|LPIN1', 'LPIN1|p.R605Lfs*24|1|0.13|ENSG00000134324|chr2:11802939-11802945|AGCGCGC/-|frameshift_variant', 'LPIN1|p.G744Afs*11|1|0.25|ENSG00000134324|chr2:11815174-11815174|G/-|frameshift_variant', 'nc|ENSG00000134324|Q14693|LPIN1', 'nc|ENSG00000134324|Q14693-2|LPIN1', 'nc|ENSG00000134324|Q14693-4|LPIN1', 'ENSG00000134324|ENST00000674199|LPIN1', 'nc|ENSG00000134324|Q14693-5|LPIN1', 'nc|ENSG00000134324|Q14693-7|LPIN1'] 26970 14122 FLKHYFVRNS True NCI_RA007_Epitope_Rep2 1309.69314067381 1309.69204993586 59.593 2 -0.8909620860298394 0.2692889137737962 1.0 ['ENSG00000173212|ENST00000369500|MAB21L3'] 123860 17495 VIYYSFNIVCL True PC9_epitope_Rep1 1332.67879604928 1332.6771449037901 72.09 3 -0.8909869094352638 0.26930451943398603 1.0 ['ENSG00000183034|ENST00000331427|OTOP2'] 46127 16454 ITAHHTEVLP True PC9_epitope_Rep4 1116.5927579262 1116.5916699358602 71.259 2 -0.8910188010116549 0.26930451943398603 1.0 ['ENSG00000162415|ENST00000359600|ZSWIM5'] 125390 21360 VLSWVSFWI True PC9_epitope_Rep1 1135.60661708519 1135.6055299358602 86.993 2 -0.891024610862305 0.26930451943398603 1.0 ['ENSG00000094755|ENST00000265294|GABRP', 'GABRG1|p.K296N|1|0.4|ENSG00000163285|chr4:46058245-46058245|T/A|missense_variant', 'ENSG00000163285|ENST00000295452|GABRG1', 'nc|ENSG00000113327|P18507-1|GABRG2', 'ENSG00000182256|ENST00000615808|GABRG3', 'ENSG00000113327|ENST00000639213|GABRG2', 'nc|ENSG00000113327|P18507-3|GABRG2'] 100740 10349 SLRKTRPL True PC9_epitope_Rep2 969.6083484206899 969.60724993586 45.133 2 -0.8910401303100762 0.26930451943398603 1.0 ['ENSG00000152464|ENST00000378197|RPP38'] 78935 9744 PFFFFEDYFY True PC9_epitope_Rep5 1420.6015912743997 1420.6004899358602 42.45 2 -0.8910457220388003 0.26930451943398603 1.0 ['ENST00000545576.1_1_12:8756882-8757648:-|nuORF'] 88472 6108 QYYRFHEHWRF True H1975_Epitope_Rep3 1667.7745788819896 1667.7729449037902 28.506 3 -0.8910512329640528 0.26930451943398603 1.0 ['nc|ENSG00000211460|Q15631-2|TSN', 'ENST00000490104.5_1_2:122514991-122522940:+|nuORF', 'ENST00000467324.5_1_2:122513466-122522940:+|nuORF', 'ENSG00000211460|ENST00000389682|TSN'] 29991 5192 FYFFPWLRMWR True NCI_RA007_Epitope_Rep2 1647.8172956411097 1647.8156549037901 24.815 3 -0.8910521802058047 0.26930451943398603 1.0 ['ENSG00000187186|ENST00000421828|unknown'] 65688 9868 LSHGGQDLSA True PC9_epitope_Rep5 983.46722305991 983.46612993586 42.927 2 -0.8911293703063966 0.2693567349680887 1.0 ['ENSG00000100109|ENST00000407690|TFIP11'] 12021 10860 DIDCNPYNDK True H1975_Epitope_Rep3 1195.48155279471 1195.4804499358602 46.855 2 -0.8911767256710696 0.2693734167471414 1.0 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 41868 9925 IDTVLRIEHVP True H1975_Epitope_Rep1 1290.72958575218 1290.7284899358601 43.112 2 -0.8911807032014579 0.2693734167471414 1.0 ['ENSG00000066739|ENST00000359933|ATG2B'] 31011 17979 GAVDALAAALA True PC9_epitope_Rep5 941.5181960036099 941.51708993586 74.174 2 -0.8911916602712482 0.2693734167471414 1.0 ['ENSG00000107625|ENST00000373585|DDX50'] 19922 13192 ELYFFHELSP True PC9_epitope_Rep1 1280.607739284 1280.60664993586 55.606 2 -0.8912274669464929 0.26938364216536975 1.0 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1', 'ENST00000504698.1_1_5:33456142-33459991:+|nuORF'] 69645 9748 LVVRSGRDR True NCI_RA007_Epitope_Rep1 1056.6152247062798 1056.61412993586 41.919 2 -0.8913346229261971 0.26942831152473584 1.0 ['ENST00000522720.1_1_8:101733810-101734948:-|nuORF'] 134323 12014 WRWQLEEERKR True NCI_RA007_Epitope_Rep1 1614.8379074145398 1614.8368099358602 50.719 2 -0.891349464159326 0.26942831152473584 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 85813 9414 QLYWYYLEQFQ True PC9_epitope_Rep5 1579.7347307022699 1579.7330849037899 41.166 3 -0.8913587342584826 0.26942831152473584 1.0 ['ENST00000523948.5_1_8:56686169-56737149:+|nuORF', 'ENSG00000137574|ENST00000260129|TGS1'] 109075 12390 TFENYYRKQRK True H1975_Epitope_Rep3 1531.7895602397896 1531.7884699358601 52.846 2 -0.8914692703126059 0.26945144136579907 1.0 ['nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6'] 30531 20526 GAIHLQTGGE True PC9_epitope_Rep2 981.4879585044899 981.48686993586 84.386 2 -0.8914779699808403 0.26945144136579907 1.0 ['WNK3|p.G1249E|2|0.38|ENSG00000196632|chrX:54239005-54239005|C/T|missense_variant'] 79456 8482 PGPLSKQGS True PC9_epitope_Rep3 869.46068112749 869.46013496793 37.587 1 -0.8914804750689345 0.26945144136579907 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 23847 20698 EYLRSYFI True PC9_epitope_Rep2 1089.54949613189 1089.54838993586 85.051 2 -0.891498965579056 0.26945144136579907 1.0 ['ENSG00000169860|ENST00000305097|P2RY1'] 11183 18394 DEINRPRRILN True NCI_RA007_Epitope_Rep1 1394.7742445288197 1394.7725849037902 75.684 3 -0.8915057494713501 0.26945144136579907 1.0 ['nc|ENSG00000188107|Q5T1H1-4|EYS'] 110272 14343 TIGAEKLKV True PC9_epitope_Rep2 957.5858816406098 957.58478993586 60.433 2 -0.8916008993211466 0.2694681163679107 1.0 ['nc|ENSG00000185053|Q96LD1|SGCZ', 'ENSG00000185053|ENST00000382080|SGCZ'] 76681 16185 NTLERREKHEK True PC9_epitope_Rep2 1438.7640737679396 1438.7629699358602 67.508 2 -0.8916037340685192 0.2694681163679107 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 65989 8121 LSLSWRLFM True PC9_epitope_Rep4 1151.6161362230698 1151.61448490379 38.692 3 -0.8916170623593637 0.2694681163679107 1.0 ['nc|ENSG00000140009|Q92731-4|ESR2'] 18514 8575 EKQIWVEKYY True H1975_Epitope_Rep1 1384.7027022979998 1384.70160993586 37.91 2 -0.8916218607610509 0.26947833874398297 1.0 ['ENST00000531389.2_1_12:122991779-122992905:-|nuORF'] 131421 22107 VVTLLSNY True PC9_epitope_Rep6 907.50148331031 907.50038993586 97.976 2 -0.8916639868225262 0.2694987826378977 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 64947 9870 LSCLEEERL True NCI_RA007_Epitope_Rep5 1090.53286009158 1090.5317699358602 44.611 2 -0.8916706245811263 0.2694987826378977 1.0 ['nc|ENSG00000007171|P35228-2|NOS2', 'chr17:27789688-27793588|304|24.82|0.71|5.12|-|ENST00000646938|NOS2,NOS2', 'ENSG00000007171|ENST00000313735|NOS2'] 117932 12097 VAQTSLVV True PC9_epitope_Rep6 815.4752685624699 815.47416993586 57.86 2 -0.8917793246833398 0.26953966699314397 1.0 ['ENSG00000138449|ENST00000261024|SLC40A1', 'ENST00000479598.5_1_2:190437559-190445261:-|nuORF'] 130053 16385 VTQDAPIP True PC9_epitope_Rep2 839.4388830537499 839.43778993586 68.271 2 -0.8917857549463843 0.26953966699314397 1.0 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 111424 14572 TLKISDLV True PC9_epitope_Rep1 887.53278343859 887.53168993586 60.875 2 -0.891792170154039 0.26953966699314397 1.0 ['ENST00000439876.1_1_9:20683317-20683413:-|nuORF'] 24970 16538 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 72.845 2 -0.8917952517899307 0.26953966699314397 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 117303 13584 VAAEPYLYREA True NCI_RA007_Epitope_Rep4 1280.6401020414398 1280.63900993586 59.458 2 -0.8918753854008507 0.2695601074546676 1.0 ['ENSG00000175029|ENST00000309035|CTBP2', 'CTBP2|p.Y212Lfs*38|1|0.35|ENSG00000175029|chr10:124994615-124994616|-/G|frameshift_variant'] 4078 8955 AHSHSYSH True PC9_epitope_Rep2 924.3838277891202 924.38272993586 39.801 2 -0.8919080304069202 0.2695601074546676 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 135467 5926 YEATLEEC[Carbamidomethyl]C[Carbamidomethyl]AK True H1975_Epitope_Rep1 1372.5639030785399 1372.56280993586 27.865 2 -0.8919728158840352 0.26956168944725023 1.0 ['CON__P02769'] 42857 24713 IFPWCRLRP True PC9_epitope_Rep4 1186.64335403042 1186.64224993586 103.55 2 -0.8919921334681732 0.26956168944725023 1.0 ['CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant'] 2011 6656 AELAEVRRE True NCI_RA007_Epitope_Rep2 1071.56727145435 1071.5661699358602 30.502 2 -0.8920270318529673 0.26956168944725023 1.0 ['ENSG00000076201|ENST00000265562|PTPN23'] 45598 13346 ISGQAFGVGAL True PC9_epitope_Rep5 1018.5447451046198 1018.54364993586 56.35 2 -0.8920276074198888 0.26956168944725023 1.0 ['ENSG00000076650|ENST00000170564|GPATCH1', 'ENST00000592165.1_1_19:33587130-33591098:+|nuORF'] 15993 16878 EDYRWWWRNFL True NCI_RA007_Epitope_Rep2 1669.7789955560895 1669.77788993586 70.384 2 -0.8920375276067787 0.26956168944725023 1.0 ['ENSG00000101337|ENST00000398022|TM9SF4'] 125844 10228 VNQARQAPRLK True NCI_RA007_Epitope_Rep1 1279.7473015049898 1279.7462099358602 43.796 2 -0.8920490798673347 0.26956168944725023 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 125448 22420 VLTTLERR True PC9_epitope_Rep3 986.58727862294 986.58618993586 91.516 2 -0.8920774704112429 0.26956168944725023 1.0 ['nc|ENSG00000176463|Q9UIG8-3|SLCO3A1', 'ENST00000553653.5_1_15:92397138-92694297:+|nuORF', 'nc|ENSG00000176463|Q9UIG8-2|SLCO3A1', 'ENSG00000176463|ENST00000318445|SLCO3A1'] 121789 9546 VGMPGPWGT True NCI_RA007_Epitope_Rep4 900.4163737873599 900.41526993586 43.568 2 -0.8921552432705606 0.269599888080582 1.0 ['ENSG00000282936|ENST00000634965|unknown'] 64845 14356 LSALRVEEV True PC9_epitope_Rep1 1014.57095985246 1014.56986993586 60.044 2 -0.8921828728886193 0.26963808564513647 1.0 ['nc|ENSG00000012048|P38398-6|BRCA1', 'nc|ENSG00000012048|P38398-5|BRCA1', 'nc|ENSG00000012048|P38398-3|BRCA1', 'BRCA1|p.E1257Gfs*9|1|0.28|ENSG00000012048|chr17:43091760-43091761|CT/-|frameshift_variant', 'ENSG00000012048|ENST00000357654|BRCA1', 'nc|ENSG00000012048|P38398-7|BRCA1', 'ENST00000493795.5_1_17:41276035-41277334:-|nuORF', 'nc|ENSG00000012048|P38398-2|BRCA1'] 126156 14620 VPFPPPMP True H1975_Epitope_Rep2 880.4516966669199 880.45058993586 61.396 2 -0.892291597040722 0.2696902716767858 1.0 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'DROSHA|p.G921Vfs*23|2|0.17|ENSG00000113360|chr5:31449340-31449341|-/A|frameshift_variant'] 92956 23611 RRPRRKRAHPA True PC9_epitope_Rep3 1399.84974994127 1399.84810490379 96.105 3 -0.8923215449563323 0.2696967153488893 1.0 ['ENST00000460758.1_1_3:48511100-48514492:-|nuORF'] 128060 16307 VRRLPGGG True H1975_Epitope_Rep3 810.4824196315798 810.48132993586 68.199 2 -0.8923434783906022 0.2696967153488893 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 36927 14801 GVRCAGGH True NCI_RA007_Epitope_Rep3 755.3496912098699 755.3491449679301 65.641 1 -0.8923632036726474 0.2696993859023319 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B'] 123518 16524 VIHRLQLI True PC9_epitope_Rep2 990.6338348925399 990.63272993586 68.799 2 -0.8923935600491235 0.2696993859023319 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'nc|ENSG00000172901|Q6Q4G3-2|LVRN', 'nc|ENSG00000172901|Q6Q4G3-3|LVRN'] 24869 17457 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 72.854 2 -0.8924240516212346 0.2696993859023319 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 105116 10925 STLPKSLSL True PC9_epitope_Rep1 944.55424715916 944.55314993586 46.909 2 -0.8924795404595751 0.26972358997314233 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 45051 16542 IQNWAQPLL True PC9_epitope_Rep1 1081.5920296502097 1081.59092993586 68.453 2 -0.8925046252985988 0.26973380520080015 1.0 ['ENST00000569289.5_1_16:68059372-68071937:+|nuORF'] 22293 6095 ETEDPEPNY True H1975_Epitope_Rep2 1092.4247491112399 1092.42364993586 28.421 2 -0.8925460383994996 0.2697440201426773 1.0 ['ENSG00000158517|ENST00000289473|NCF1', 'ENST00000486097.1_1_7:74197824-74199646:+|nuORF', 'ENST00000398421.6_1_7:74197704-74202433:+|nuORF', 'ENST00000455062.2_1_7:74197704-74203407:+|nuORF', 'ENST00000423083.1_1_7:72644023-72649727:+|nuORF', 'nc|ENSG00000165178|A8MVU1|NCF1C', 'nc|ENSG00000290838|A6NI72|NCF1B'] 24997 25621 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 111.77 2 -0.8925897291277483 0.2697682225734708 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 24996 25547 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 111.43 2 -0.8926608868308153 0.26977843674816765 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 96839 7887 SESLRILAHT True H1975_Epitope_Rep1 1125.61422164677 1125.6131299358601 35.289 2 -0.8926940594164519 0.2697886506371253 1.0 ['ENSG00000179564|ENST00000316436|LSMEM2'] 114094 13755 TRRPPATA True NCI_RA007_Epitope_Rep3 868.4878989348399 868.48680993586 61.43 2 -0.8927288321429852 0.2697988642403558 1.0 ['CLEC14A|p.K422Nfs*43|1|0.35|ENSG00000176435|chr14:38254757-38254757|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 57073 12881 LEEKQQQP True H1975_Epitope_Rep2 998.5032742154599 998.50216993586 54.658 2 -0.8927584461939414 0.2698053037932192 1.0 ['ENSG00000204713|ENST00000377199|TRIM27', 'ENST00000496091.1_1_6:28882986-28887935:-|nuORF', 'ENST00000498117.1_1_6:28879453-28889728:-|nuORF', 'nc|ENSG00000204713|P14373-2|TRIM27', 'ENST00000481474.5_1_6:28876558-28891553:-|nuORF'] 99351 21461 SLDRVSMTEL True PC9_epitope_Rep5 1149.56997387629 1149.5688699358602 87.588 2 -0.8927842200034274 0.2698053037932192 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180'] 23508 22197 EWKNSSKEFL True PC9_epitope_Rep4 1266.6244519772997 1266.62334993586 93.626 2 -0.8927909415345878 0.2698155167349679 1.0 ['ENST00000444245.5_1_7:131011571-131012404:-|nuORF'] 91351 3572 RMPGRGKG True PC9_epitope_Rep2 857.4653896684498 857.46428993586 19.015 2 -0.8928274195287152 0.26981818181818185 1.0 ['ENST00000342502.6_2_12:99038521-99038740:-|nuORF'] 36964 13686 GVRIQPMSER True PC9_epitope_Rep4 1171.6131761009499 1171.61152490379 60.533 3 -0.8928836638774762 0.26981818181818185 1.0 ['ENSG00000163637|ENST00000638394|PRICKLE2'] 117865 13083 VAPKKIKLA True NCI_RA007_Epitope_Rep4 966.6589870112198 966.65788993586 57.423 2 -0.8928925232501193 0.26981818181818185 1.0 ['ENSG00000118997|ENST00000312428|DNAH7'] 86473 8712 QQTYDMWLKK True H1975_Epitope_Rep1 1339.6594575870297 1339.65836993586 38.438 2 -0.8929162235652713 0.2698283940084754 1.0 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 25005 16788 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 71.331 2 -0.8929333076774817 0.2698288399149793 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 78767 8530 PEKAAATYEQM True H1975_Epitope_Rep1 1237.5648884958498 1237.56378993586 37.739 2 -0.8929443810348233 0.2698288399149793 1.0 ['nc|ENSG00000278535|Q6UWP2-2|DHRS11', 'ENSG00000278535|ENST00000618403|DHRS11'] 10291 14680 CGSGYGSG True NCI_RA007_Epitope_Rep5 686.23298969178 686.2324449679301 63.136 1 -0.8929930085255703 0.2698288399149793 1.0 ['CON__REFSEQ:XP_001474382'] 4981 20869 ALKDFWNL True PC9_epitope_Rep4 1005.52836676449 1005.52726993586 88.428 2 -0.893068854697751 0.2698288399149793 1.0 ['ENSG00000177303|ENST00000321617|CASKIN2', 'GRB2-CASKIN2|1|fusion', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2'] 118745 10619 VEDLFTEDFK True H1975_Epitope_Rep3 1241.58158410581 1241.5804899358602 45.917 2 -0.8930879375063835 0.2698288399149793 1.0 ['DPP6|p.S138T|1|0.14|ENSG00000130226|chr7:154474993-154474993|G/C|missense_variant'] 60999 6402 LLALHSAA True PC9_epitope_Rep1 794.4650382319401 794.46394993586 29.433 2 -0.8930901052419598 0.2698288399149793 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 107573 18748 TAEKPVPAL True PC9_epitope_Rep5 924.5280324113198 924.52692993586 77.126 2 -0.8930915531490028 0.2698288399149793 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN'] 23270 22223 EVRNLRGI True PC9_epitope_Rep1 955.5563128478299 955.55520993586 90.304 2 -0.8931466793583467 0.2698288399149793 1.0 ['ENSG00000185453|ENST00000614654|ZSWIM9'] 42845 25018 IFNKELLLIP True PC9_epitope_Rep3 1198.7325458742998 1198.7314499358602 101.58 2 -0.8931596836360634 0.2698288399149793 1.0 ['ENSG00000161956|ENST00000321337|SENP3'] 39319 15386 HLRRSLKTI True PC9_epitope_Rep5 1122.69856040742 1122.69691490379 64.191 3 -0.8931881140788853 0.2698288399149793 1.0 ['ENSG00000130158|ENST00000294618|DOCK6'] 140189 12703 YVVIKFNKD True PC9_epitope_Rep1 1124.62299542532 1124.6213549037902 53.734 3 -0.8931911352901981 0.2698288399149793 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2'] 115551 13272 TVHNPGLAL True PC9_epitope_Rep3 920.5079656730799 920.50686993586 56.086 2 -0.8932622283742152 0.26983150388030486 1.0 ['ENSG00000112212|ENST00000373161|TSPO2'] 82626 16861 PVLGEGVPI True PC9_epitope_Rep2 879.5065686907499 879.50546993586 70.103 2 -0.8932692167798372 0.26983150388030486 1.0 ['ENSG00000111530|ENST00000545606|CAND1', 'nc|ENSG00000111530|Q86VP6-2|CAND1'] 57158 9346 LEERQRFQEER True NCI_RA007_Epitope_Rep2 1518.75390300706 1518.7528099358601 40.961 2 -0.8932724929278665 0.26983150388030486 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1'] 2740 5072 AETWMDEFAE True H1975_Epitope_Rep3 1227.47540478511 1227.4743099358602 24.627 2 -0.8933319235525665 0.26983794062950067 1.0 ['nc|ENSG00000174473|Q49A17-2|GALNTL6', 'ENSG00000174473|ENST00000506823|GALNTL6'] 137443 20197 YLNGNYLII True PC9_epitope_Rep5 1081.58079626017 1081.5796899358602 82.733 2 -0.8933327218582442 0.26983794062950067 1.0 ['ENSG00000139209|ENST00000266579|SLC38A4'] 8631 19528 AVALTNLEDI True PC9_epitope_Rep5 1057.56554011885 1057.56444993586 80.166 2 -0.8934421817319399 0.26984437701869435 1.0 ['HEXA-BBS4|1|fusion', 'nc|ENSG00000140463|Q96RK4-3|BBS4', 'ENSG00000140463|ENST00000268057|BBS4', 'nc|ENSG00000140463|Q96RK4-2|BBS4', 'ENST00000562219.1_1_15:73023651-73027536:+|nuORF'] 63616 10679 LPLRLNAEPV True H1975_Epitope_Rep1 1120.6604435632 1120.65934993586 46.037 2 -0.8934560581312074 0.26984437701869435 1.0 ['ENST00000355221.7_3_8:54628441-54628540:-|nuORF'] 29157 18620 FTVQSVMLH True PC9_epitope_Rep1 1060.5375515491999 1060.5364499358602 76.41 2 -0.893469962998407 0.26985458612975394 1.0 ['ENST00000585105.5_1_17:73482215-73489290:+|nuORF', 'ENST00000581085.5_1_17:73467944-73489290:+|nuORF', 'ENSG00000177728|ENST00000314256|TMEM94', 'nc|ENSG00000177728|Q12767-3|TMEM94', 'nc|ENSG00000177728|Q12767-2|TMEM94'] 57386 14148 LEHNPYEKFS True PC9_epitope_Rep1 1262.59315184902 1262.5920499358601 59.243 2 -0.8935392998462173 0.269920722584975 1.0 ['ENSG00000096401|ENST00000371477|CDC5L'] 18782 12637 ELDRHRYERKI True NCI_RA007_Epitope_Rep1 1513.8113583135298 1513.81026993586 53.136 2 -0.8935871252067643 0.269944912055032 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 119858 6598 VEVSGDPELQP True NCI_RA007_Epitope_Rep2 1168.5611830143998 1168.56008993586 30.273 2 -0.8935954262353292 0.2699513450030759 1.0 ['chr7:97966977-97969770|493|37.08|0.0|21.82|-|2|None,CCZ1P1|2'] 100745 14638 SLRLHYRMRFY True NCI_RA007_Epitope_Rep1 1540.8085218625602 1540.80742993586 60.991 2 -0.8936148044879684 0.2699513450030759 1.0 ['ENSG00000162434|ENST00000342505|JAK1'] 113085 8568 TPYKQEINAK True H1975_Epitope_Rep1 1190.6295373577398 1190.62844993586 37.884 2 -0.8936655875785362 0.26997175852137684 1.0 ['ENSG00000138356|ENST00000374700|AOX1'] 81663 478 PRSSSLWIELC True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 2.7262 3 -0.8936695862017624 0.26997175852137684 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 83913 13735 QEISKMKSEL True H1975_Epitope_Rep1 1191.61692406871 1191.6158299358601 57.972 2 -0.8936891487591101 0.26998084746473555 1.0 ['CDC42BPB|p.I686M|1|0.13|ENSG00000198752|chr14:102968654-102968654|G/C|missense_variant'] 95411 6629 SAKDAHVLPP True H1975_Epitope_Rep3 1033.55564414149 1033.5545499358602 30.452 2 -0.8937201867708267 0.26998084746473555 1.0 ['ENSG00000007545|ENST00000397412|CRAMP1'] 20803 5367 EQNQQCLREEQ True NCI_RA007_Epitope_Rep1 1403.6099411953098 1403.60884993586 24.955 2 -0.8937255223027786 0.26998084746473555 1.0 ['EVC2|p.H1088N|1|0.58|ENSG00000173040|chr4:5576250-5576250|G/T|missense_variant'] 91440 8995 RNLWEHYYK True H1975_Epitope_Rep3 1307.6411051009502 1307.64000993586 39.594 2 -0.8937341511381813 0.26998084746473555 1.0 ['ENSG00000113966|ENST00000463745|ARL6', 'nc|ENSG00000113966|Q9H0F7-2|ARL6', 'ARL6|p.Y76C|1|0.38|ENSG00000113966|chr3:97780656-97780656|A/G|missense_variant'] 21941 8934 ESKELFCTP True NCI_RA007_Epitope_Rep5 1052.48484727 1052.48374993586 41.026 2 -0.8937612097120832 0.26998084746473555 1.0 ['ENST00000379983.6_1_15:70959504-70959603:-|nuORF'] 99453 14382 SLEKQAKHLRE True H1975_Epitope_Rep1 1337.74154741821 1337.7404499358602 60.514 2 -0.8938163515696359 0.26998350434758295 1.0 ['nc|ENSG00000040341|Q9NUL3-7|STAU2', 'nc|ENSG00000040341|Q9NUL3-2|STAU2', 'ENSG00000040341|ENST00000524300|STAU2', 'nc|ENSG00000040341|Q9NUL3-6|STAU2'] 62336 8282 LLRHQPHFRM True NCI_RA007_Epitope_Rep2 1333.71897858217 1333.71733490379 36.853 3 -0.8938280734474258 0.26998350434758295 1.0 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 95781 9875 SDDDDDEDQKK True PC9_epitope_Rep3 1308.4953478522 1308.4942499358601 42.941 2 -0.8938617385142605 0.26998350434758295 1.0 ['NOLC1|p.E138D|1|0.38|ENSG00000166197|chr10:102157528-102157528|G/C|missense_variant'] 4475 17932 AKGKPELQTS True H1975_Epitope_Rep2 1057.5767735088898 1057.57627496793 74.298 1 -0.8939065371373629 0.2700141185680138 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'SMARCC2|p.K898Sfs*42|1|0.2|ENSG00000139613|chr12:56168124-56168124|T/-|frameshift_variant', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2'] 136679 5150 YIELMNYIHR True NCI_RA007_Epitope_Rep5 1350.67544200434 1350.67378490379 26.504 3 -0.8939092755261316 0.2700141185680138 1.0 ['FYN|p.R383L|1|0.26|ENSG00000010810|chr6:111694500-111694500|C/A|missense_variant'] 91175 10016 RLPTPEQI True PC9_epitope_Rep2 952.5341804209199 952.53308993586 43.853 2 -0.8939167974824266 0.2700141185680138 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 70690 16905 MDKLKFLF True NCI_RA007_Epitope_Rep4 1040.5728744287599 1040.5717699358602 73.254 2 -0.8939345515115558 0.27002432273756605 1.0 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5'] 118529 6275 VDTQYKEYQER True H1975_Epitope_Rep1 1457.67867237813 1457.6775699358602 29.204 2 -0.8939661908394995 0.2700511587598893 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 55643 4541 LDAGRCPEPP True H1975_Epitope_Rep3 1053.49132963277 1053.49022993586 22.587 2 -0.8940259162405514 0.2700511587598893 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.G1782Afs*21|1|0.22|ENSG00000160299|chr21:46411414-46411414|G/-|frameshift_variant'] 29650 10347 FVLWERPAL True PC9_epitope_Rep6 1129.6284151589298 1129.62676490379 50.515 3 -0.8940471375363048 0.2700511587598893 1.0 ['ENST00000360900.10_3_16:86564750-86564960:-|nuORF'] 62300 20615 LLQQLWYKARY True H1975_Epitope_Rep3 1480.8190694629202 1480.8179699358602 86.158 2 -0.8940726094249047 0.2700511587598893 1.0 ['ENSG00000100625|ENST00000216513|SIX4', 'SIX4|p.Q371Rfs*8|1|0.35|ENSG00000100625|chr14:60720196-60720197|CT/-|frameshift_variant'] 95131 3258 RYWRIEKCH True PC9_epitope_Rep1 1289.6451449355698 1289.64349490379 17.424 3 -0.8940904224599729 0.270064014759735 1.0 ['ENSG00000100596|ENST00000216484|SPTLC2', 'ENST00000557566.1_1_14:78045296-78063654:-|nuORF'] 24972 23189 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 100.72 2 -0.8941021191424499 0.270064014759735 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 23325 18926 EVTDKYFH True PC9_epitope_Rep5 1037.48181049489 1037.4807099358602 77.821 2 -0.8941368617779378 0.270064014759735 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1'] 54925 6320 LAGRKVKDV True PC9_epitope_Rep3 984.6080140675198 984.60690993586 29.339 2 -0.894156245350125 0.270064014759735 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF'] 101057 10480 SLTPASPTEVP True PC9_epitope_Rep2 1097.56045473841 1097.5593499358602 45.629 2 -0.8941908024247401 0.27007044222060717 1.0 ['ENSG00000263956|ENST00000682118|NBPF11'] 68860 10808 LVEDEAAAVAP True NCI_RA007_Epitope_Rep5 1083.54480467427 1083.54370993586 48.207 2 -0.8942043324242948 0.27007044222060717 1.0 ['ENST00000274376.10_1_5:86563790-86563910:+|nuORF'] 88040 8636 QVTNLVPG True PC9_epitope_Rep5 826.4548674710599 826.45431496793 38.161 1 -0.8942131058376321 0.27008064403415843 1.0 ['ENSG00000110375|ENST00000264031|UPK2'] 11536 11731 DGLLHVQWRP True NCI_RA007_Epitope_Rep2 1219.6461904813898 1219.6450899358601 50.228 2 -0.8942304575400534 0.2700908455625437 1.0 ['ENST00000449870.5_2_19:10802311-10802632:+|nuORF'] 115074 12855 TTSWCSYNRAH True PC9_epitope_Rep5 1324.56186880408 1324.56022490379 54.457 3 -0.8943244857200658 0.27010747278241304 1.0 ['ENST00000439557.6_1_16:77225118-77228327:+|nuORF'] 100820 9851 SLRVLRAA True H1975_Epitope_Rep2 884.5555845718399 884.55448993586 42.878 2 -0.8943340737911929 0.27010747278241304 1.0 ['ENST00000356663.7_2_19:1014392-1021086:-|nuORF'] 37517 7137 GYIFFYMHKE True H1975_Epitope_Rep3 1333.6165301458902 1333.6154299358602 32.424 2 -0.8943389744939141 0.27010747278241304 1.0 ['nc|ENSG00000135913|Q86T82-2|USP37', 'ENSG00000135913|ENST00000258399|USP37'] 55155 20071 LANKSITYQMF True PC9_epitope_Rep1 1314.6642086143 1314.66256490379 82.03 3 -0.8944011841048729 0.2701418489273985 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19'] 52703 22227 KQKLLLKKRHI True PC9_epitope_Rep3 1403.94527303555 1403.9436149037901 90.781 3 -0.8944043817487085 0.2701418489273985 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 15660 15870 ECDDCDSC True PC9_epitope_Rep3 888.1935696015601 888.19246993586 66.193 2 -0.8944301402615744 0.2701660238135167 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 15659 15778 ECDDCDSC True PC9_epitope_Rep3 888.1935696015601 888.19246993586 65.847 2 -0.8945025536888132 0.270168672004919 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 42155 9681 IEETITTVV True PC9_epitope_Rep6 1003.54374204511 1003.54264993586 47.617 2 -0.8945162659510844 0.270168672004919 1.0 ['nc|ENSG00000154358|Q5VST9-3|OBSCN'] 115558 9577 TVHVGDSALM True PC9_epitope_Rep3 1028.49608066004 1028.49498993586 41.788 2 -0.8945631220702779 0.270168672004919 1.0 ['ENSG00000160593|ENST00000356289|JAML', 'nc|ENSG00000160593|Q86YT9-2|JAML', 'nc|ENSG00000160593|Q86YT9-3|JAML', 'ENST00000534294.5_1_11:118074137-118095689:-|nuORF'] 118287 11679 VDANYNSSVL True PC9_epitope_Rep2 1080.5087535187201 1080.5076499358602 50.254 2 -0.8946116891443241 0.27017887087758524 1.0 ['ENSG00000214595|ENST00000356458|EML6', 'nc|ENSG00000214595|Q6ZMW3-2|EML6'] 56988 11016 LEEDHGLFEIS True NCI_RA007_Epitope_Rep1 1287.59829679911 1287.5971899358601 46.845 2 -0.8946599464099841 0.2701890694652115 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3', 'nc|ENSG00000080200|Q68DQ2-1|CRYBG3'] 100552 8991 SLPVNQLYG True NCI_RA007_Epitope_Rep4 989.51819600361 989.51708993586 41.418 2 -0.8947022386897201 0.2701992677678097 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 24957 23985 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 100.67 2 -0.8947206554902023 0.27020078525618635 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 86349 5919 QQLAQLQKEK True PC9_epitope_Rep1 1212.6826355597598 1212.68098490379 27.582 3 -0.8947240694095836 0.27020078525618635 1.0 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1'] 15772 6681 EDFEQKYNFRF True NCI_RA007_Epitope_Rep3 1521.6888431390096 1521.68719490379 33.362 3 -0.894762044493853 0.27020078525618635 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 111282 12877 TLHEKTIF True PC9_epitope_Rep3 987.5389314481899 987.53782993586 54.548 2 -0.8947717841698313 0.27020078525618635 1.0 ['CNTNAP2|p.R1119L|1|0.07|ENSG00000174469|chr7:148229754-148229754|G/T|missense_variant'] 25649 9893 FEWWYFRKYRT True H1975_Epitope_Rep3 1680.8201320920796 1680.81902993586 43.085 2 -0.8947933777018715 0.27020078525618635 1.0 ['ST7|p.G89R|1|0.55|ENSG00000004866|chr7:117119591-117119591|G/A|missense_variant'] 122715 22705 VGTYWKRLM True PC9_epitope_Rep6 1152.6113851958 1152.61087496793 100.4 1 -0.8948010588620117 0.27020078525618635 1.0 ['ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 127664 6826 VRERRVTPD True PC9_epitope_Rep4 1126.6207040095398 1126.6190549037901 33.473 3 -0.8948063519189067 0.27020078525618635 1.0 ['nc|ENSG00000140287|P19113-2|HDC', 'ENSG00000140287|ENST00000267845|HDC', 'ENST00000558761.5_1_15:50545740-50557820:-|nuORF', 'ENST00000558679.1_1_15:50546296-50557931:-|nuORF'] 25018 15103 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 63.351 2 -0.8948210079905217 0.27021098225513485 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 13268 6523 DLVWGSERPP True H1975_Epitope_Rep3 1154.57202248162 1154.57092993586 30.058 2 -0.8949012716401633 0.2702136280440948 1.0 ['ENSG00000122121|ENST00000371106|XPNPEP2'] 24995 23175 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 100.59 2 -0.8949295618344815 0.2702136280440948 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 129019 3592 VTAAHCVEKP True NCI_RA007_Epitope_Rep4 1053.52771514149 1053.52660993586 19.862 2 -0.8949691709133382 0.2702136280440948 1.0 ['ENSG00000184012|ENST00000332149|TMPRSS2', 'nc|ENSG00000184012|O15393-2|TMPRSS2'] 30942 21903 GASLNRRPL True PC9_epitope_Rep2 982.5672118846999 982.56610993586 89.726 2 -0.8949882920423442 0.27023402025847015 1.0 ['ENSG00000107829|ENST00000331272|FBXW4', 'nc|ENSG00000107829|P57775|FBXW4'] 137669 9632 YLYYWLKHHYN True NCI_RA007_Epitope_Rep2 1598.7670338900598 1598.7653849037902 42.083 3 -0.8949900757061957 0.27023402025847015 1.0 ['ENST00000249377.4_1_7:102582770-102585051:+|nuORF', 'ENSG00000128606|ENST00000339431|LRRC17'] 60323 22506 LIFRYLQNRSR True PC9_epitope_Rep2 1464.8313654821197 1464.83026993586 92.059 2 -0.8950333484526188 0.27025818710182187 1.0 ['ENSG00000182004|ENST00000414487|SNRPE'] 64702 27277 LRLLRLKLK True NCI_RA007_Epitope_Rep3 1151.8230326445498 1151.82139490379 119.95 3 -0.8950751202556906 0.27026838230157735 1.0 ['ENSG00000105329|ENST00000221930|TGFB1'] 93299 20944 RRRYLRRKER True H1975_Epitope_Rep3 1487.9021794369498 1487.90053490379 87.476 3 -0.8951440477226686 0.2702925479896057 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 127268 16720 VQLDALPFF True PC9_epitope_Rep4 1048.5593325395998 1048.55822993586 72.282 2 -0.8951870710156352 0.2703306835803797 1.0 ['nc|ENSG00000112759|Q99808-2|SLC29A1', 'ENSG00000112759|ENST00000371755|SLC29A1', 'ENST00000472176.1_1_6:44197340-44197857:+|nuORF'] 136829 2217 YITWTYFFR True NCI_RA007_Epitope_Rep5 1295.6338944621898 1295.63224490379 12.558 3 -0.8952325524931642 0.2703371006272614 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 69687 9477 LVWWGDIWWKT True NCI_RA007_Epitope_Rep1 1488.7554065771997 1488.7543099358602 40.858 2 -0.8952452249677003 0.2703371006272614 1.0 ['ENSG00000096264|ENST00000373089|NCR2'] 25170 8719 FDTENLEKI True NCI_RA007_Epitope_Rep5 1107.54480467427 1107.54427496793 40.202 1 -0.8953357859534412 0.27035371032632993 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP'] 128626 19077 VSLDAALP True H1975_Epitope_Rep1 784.43306939732 784.43196993586 79.514 2 -0.8953684622011194 0.27035371032632993 1.0 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF', 'USP54|p.S1440*|1|0.29|ENSG00000166348|chr10:73500821-73500831|CCTCACGTTTG/-|frameshift_variant'] 132466 7855 VYNWPLNQP True NCI_RA007_Epitope_Rep3 1129.55564414149 1129.55398490379 38.018 3 -0.8953881883988369 0.27035371032632993 1.0 ['ENST00000462251.1_1_19:11877828-11888701:+|nuORF'] 95511 10057 SAPTGTIPP True NCI_RA007_Epitope_Rep4 839.4388830537499 839.43833496793 45.529 1 -0.8954068845167277 0.27036390305231545 1.0 ['ENSG00000184956|ENST00000421673|MUC6'] 122486 7954 VGSQSFSP True H1975_Epitope_Rep2 807.37628279719 807.37518993586 35.543 2 -0.8954364500855196 0.27037409549353225 1.0 ['ENSG00000111913|ENST00000643898|RIPOR2', 'nc|ENSG00000111913|Q9Y4F9|RIPOR2', 'RIPOR2|p.E68Sfs*14|1|0.19|ENSG00000111913|chr6:24873703-24873703|G/-|frameshift_variant', 'nc|ENSG00000111913|Q9Y4F9-2|RIPOR2'] 44401 20624 INESGPPLQ True NCI_RA007_Epitope_Rep1 953.4818104948899 953.4812649679301 84.447 1 -0.8954741749988864 0.2703805107001173 1.0 ['TMEM132D|p.D258N|1|0.22|ENSG00000151952|chr12:129700006-129700006|C/T|missense_variant'] 9281 19123 AVRPGHRGL True PC9_epitope_Rep5 961.5569815541699 961.55588993586 78.591 2 -0.8954950581968153 0.2703805107001173 1.0 ['ENST00000591201.5_1_19:1487843-1489828:-|nuORF', 'ENST00000587784.5_1_19:1487843-1490668:-|nuORF'] 130238 6867 VTSPKTEEPV True NCI_RA007_Epitope_Rep2 1085.56045473841 1085.5593499358602 31.327 2 -0.8955472637057159 0.27041108519227275 1.0 ['ENST00000474820.5_1_2:161129788-161130004:-|nuORF'] 1335 9089 AEEAWAQMEE True H1975_Epitope_Rep2 1192.4706537578397 1192.4695499358602 39.911 2 -0.8955578046136227 0.27041108519227275 1.0 ['ENSG00000103319|ENST00000263026|EEF2K'] 133077 10908 WACGLQPR True H1975_Epitope_Rep3 929.45415627841 929.45304993586 47.045 2 -0.8955790845265011 0.27041108519227275 1.0 ['ENST00000375859.3_1_9:91003368-91041307:+|nuORF'] 70260 9362 LYNIRVLAIDK True PC9_epitope_Rep1 1316.78162132504 1316.7799649037902 40.868 3 -0.8955818846107574 0.27041749891749195 1.0 ['DSC3|p.T548R|1|0.07|ENSG00000134762|chr18:31008036-31008036|G/C|missense_variant'] 56132 15378 LDMCSSHP True PC9_epitope_Rep3 888.3469738982001 888.34586993586 64.307 2 -0.8955925024033438 0.27041749891749195 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 133844 13918 WLWWRKTRWPW True NCI_RA007_Epitope_Rep2 1699.8888207885898 1699.88772993586 58.793 2 -0.8956178223019537 0.27042768947118473 1.0 ['ENST00000400979.2_1_1:166244958-166245396:-|nuORF'] 87681 7029 QVDLDGIPD True H1975_Epitope_Rep3 970.4607406971398 970.4596499358599 31.999 2 -0.8957039292502664 0.27045070461877957 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'DNAH9|p.Q2856Rfs*14|1|0.22|ENSG00000007174|chr17:11807876-11807876|C/-|frameshift_variant', 'DNAH9|p.R1341Gfs*27|1|0.35|ENSG00000007174|chr17:11689841-11689841|C/-|frameshift_variant', 'DNAH9|p.A1913Vfs*27|1|0.25|ENSG00000007174|chr17:11727846-11727846|C/-|frameshift_variant'] 39791 6181 HQDSSILESR True PC9_epitope_Rep3 1170.5629143499 1170.56125490379 28.817 3 -0.895716541651801 0.27045070461877957 1.0 ['ENST00000508158.5_1_4:3386893-3430067:+|nuORF', 'nc|ENSG00000159788|O14924-7|RGS12', 'nc|ENSG00000159788|O14924-6|RGS12', 'nc|ENSG00000159788|O14924-2|RGS12', 'nc|ENSG00000159788|O14924-3|RGS12', 'nc|ENSG00000159788|O14924-5|RGS12', 'nc|ENSG00000159788|O14924-4|RGS12', 'ENSG00000159788|ENST00000336727|RGS12', 'ENST00000515521.5_1_4:3422373-3428454:+|nuORF'] 3605 8184 AGPLDLGG True NCI_RA007_Epitope_Rep4 698.35990445706 698.35935496793 38.267 1 -0.8957203938847718 0.27045070461877957 1.0 ['ENST00000391711.7_1_19:37406109-37407159:-|nuORF'] 107603 2618 TAGKSKSPPK True NCI_RA007_Epitope_Rep3 999.5712942056299 999.57018993586 14.759 2 -0.8957213487373324 0.27045070461877957 1.0 ['nc|ENSG00000055070|Q7Z422-2|SZRD1'] 80833 11972 PLTSDIVSE True H1975_Epitope_Rep2 959.48114178855 959.48004993586 51.13 2 -0.895721610749438 0.27045070461877957 1.0 ['nc|ENSG00000067646|P08048-3|ZFY', 'ENSG00000067646|ENST00000155093|ZFY'] 101448 1344 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 7.5158 2 -0.8958205737587582 0.27052694794765436 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 55198 16842 LAPLAQRL True PC9_epitope_Rep3 880.54943656224 880.54832993586 69.936 2 -0.895840792473231 0.27052694794765436 1.0 ['nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-10|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-8|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-7|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-6|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-4|ADGRG2'] 79637 10130 PHEPTMKMRH True PC9_epitope_Rep2 1262.6012315182602 1262.59957490379 44.303 3 -0.8958514825796902 0.27053335754088514 1.0 ['ENSG00000169402|ENST00000404077|RSPH10B2', 'ENSG00000155026|ENST00000404406|RSPH10B'] 11107 20699 DEDSPVLIQDQ True H1975_Epitope_Rep1 1257.57247597409 1257.57136993586 86.038 2 -0.8958569137149547 0.27053335754088514 1.0 ['ENST00000456064.1_1_20:10594086-10594842:-|nuORF'] 60749 11269 LKDSLQDYQ True NCI_RA007_Epitope_Rep2 1108.5400536470001 1108.53894993586 48.42 2 -0.895908177402276 0.2705397667760631 1.0 ['ENST00000555559.5_1_14:65946487-66028150:+|nuORF', 'ENST00000554610.1_2_14:65879917-66028150:+|nuORF', 'ENST00000553924.5_1_14:65983061-66028150:+|nuORF', 'ENST00000394586.6_1_14:65878636-66028150:+|nuORF'] 13424 7877 DNNGKTFREEQ True H1975_Epitope_Rep1 1336.6007564106 1336.59964993586 35.249 2 -0.8959402336728666 0.2705397667760631 1.0 ['ENSG00000154734|ENST00000284984|ADAMTS1', 'ENST00000464589.1_1_21:28211878-28212356:-|nuORF'] 109475 19574 TGVQWHDFG True PC9_epitope_Rep5 1045.46174375665 1045.4606499358601 80.343 2 -0.8960011531223608 0.27055143619175287 1.0 ['nc|ENSG00000118513|P10242-6|MYB'] 123847 21320 VIWVLWIL True PC9_epitope_Rep5 1040.6422743179198 1040.64116993586 87.062 2 -0.8960171085427537 0.27055143619175287 1.0 ['ENST00000274979.12_2_2:242163924-242164206:+|nuORF'] 64372 12696 LQQECMRQL True PC9_epitope_Rep1 1147.54779896307 1147.54670993586 53.707 2 -0.8960722351666094 0.27055143619175287 1.0 ['nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'ENSG00000061938|ENST00000672887|TNK2', 'ENST00000420716.2_1_3:195591054-195595875:-|nuORF'] 18515 9187 EKQIWVEKYY True NCI_RA007_Epitope_Rep2 1384.7027022979998 1384.70160993586 40.343 2 -0.8960748838003535 0.27055143619175287 1.0 ['ENST00000531389.2_1_12:122991779-122992905:-|nuORF'] 23128 7498 EVMKLWNLHVM True PC9_epitope_Rep5 1398.71519864134 1398.71356490379 33.791 3 -0.8961011501687718 0.27055143619175287 1.0 ['ENST00000578106.1_1_17:30321573-30326019:+|nuORF', 'ENSG00000178691|ENST00000322652|SUZ12'] 57768 12381 LENVNKKDYVR True H1975_Epitope_Rep3 1376.74121306504 1376.7401099358601 52.81 2 -0.8961041441427765 0.27055143619175287 1.0 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 57607 8679 LELNETQVKIW True NCI_RA007_Epitope_Rep2 1371.73981608271 1371.73816490379 38.405 3 -0.8961073495553676 0.27055143619175287 1.0 ['ENSG00000120094|ENST00000239174|HOXB1'] 90988 24209 RLIMKRVLMH True PC9_epitope_Rep1 1295.76823727371 1295.76712993586 97.935 2 -0.8961342901785753 0.27055143619175287 1.0 ['ENST00000356321.4_1_15:35274023-35274074:-|nuORF'] 112219 12004 TLWNIYACGF True H1975_Epitope_Rep1 1186.5481162328997 1186.5470099358602 51.181 2 -0.8961580233686761 0.2705755857793169 1.0 ['nc|ENSG00000293032|Q6UXP3|TMEM14EP'] 100527 9118 SLPSLGKSL True NCI_RA007_Epitope_Rep5 900.52803241132 900.52692993586 41.724 2 -0.8961670946912225 0.2705819928507596 1.0 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF'] 134708 14627 WWRRRTQKRPV True H1975_Epitope_Rep1 1567.8960314273497 1567.89492993586 61.472 2 -0.8961786114676922 0.2705819928507596 1.0 ['nc|ENSG00000263639|P08118-2|MSMB'] 127659 23562 VRELRGLG True PC9_epitope_Rep4 898.5348491272598 898.53374993586 98.938 2 -0.8961966592159415 0.2705883995643553 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 29101 19981 FTQWQLTL True PC9_epitope_Rep1 1035.5389314481897 1035.5378299358601 81.682 2 -0.8961968871193842 0.2705883995643553 1.0 ['ENSG00000166860|ENST00000300101|ZBTB39'] 15560 12780 EASVSALGLLP True H1975_Epitope_Rep1 1055.5862755634298 1055.5851699358602 54.221 2 -0.8962829658776146 0.2706544352755554 1.0 ['ENST00000254480.9_1_3:47755977-47762221:-|nuORF'] 621 11421 AASSSVLALR True PC9_epitope_Rep3 973.5556441414899 973.55454993586 48.931 2 -0.8963614442107097 0.2706925439821279 1.0 ['ENST00000582233.1_1_18:29671870-29672068:-|nuORF'] 116130 18409 TVSSVGALHAL True PC9_epitope_Rep4 1053.58185888933 1053.5807699358602 78.876 2 -0.8964839040708628 0.27074461400985744 1.0 ['ENSG00000105063|ENST00000412770|PPP6R1', 'PPP6R1|p.L361Afs*10|1|0.17|ENSG00000105063|chr19:55241320-55241321|-/T|frameshift_variant'] 125179 8382 VLQAREERPLL True NCI_RA007_Epitope_Rep1 1322.7670338900598 1322.7653849037902 36.607 3 -0.8965643980953688 0.27075479601239844 1.0 ['ENST00000269300.8_1_17:8784037-8784088:-|nuORF'] 48860 4928 KESQKPFE True H1975_Epitope_Rep2 991.4974605590298 991.49636993586 24.038 2 -0.8966377189789576 0.27079290172151405 1.0 ['ENSG00000160194|ENST00000354250|NDUFV3'] 70831 16403 MEFQDHRYWLR True PC9_epitope_Rep5 1579.7354164919498 1579.73377490379 68.092 3 -0.8966847772371667 0.27081326352530544 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE', 'ENST00000477200.1_1_2:209163383-209167125:+|nuORF', 'nc|ENSG00000115020|Q9Y2I7-2|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-3|PIKFYVE'] 32909 5271 GIPAEYAP True NCI_RA007_Epitope_Rep5 816.4017692690398 816.40066993586 26.971 2 -0.8966933737864936 0.27081326352530544 1.0 ['nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 56395 8749 LDRYGRTVL True PC9_epitope_Rep6 1091.60874234351 1091.60764993586 43.543 2 -0.8967378189602669 0.27082489913866514 1.0 ['ENSG00000222036|ENST00000547889|POTEM'] 114946 4933 TTGMYHHAL True PC9_epitope_Rep4 1029.4702002653698 1029.4691099358602 25.574 2 -0.8968014438638027 0.27082489913866514 1.0 ['ENST00000531360.5_1_11:118992333-119002261:+|nuORF'] 41475 7396 IAYYDHVAV True PC9_epitope_Rep5 1049.51819600361 1049.5170899358602 33.406 2 -0.8968031521620008 0.27082489913866514 1.0 ['ENSG00000258839|ENST00000555147|MC1R'] 33890 2648 GLWRNCEL True PC9_epitope_Rep2 989.4752856458099 989.47418993586 14.838 2 -0.8968160202410442 0.27082489913866514 1.0 ['ENST00000265678.8_1_6:166825090-166825723:-|nuORF'] 71776 18535 MNHPWIMQS True H1975_Epitope_Rep2 1142.50012049466 1142.4984749037899 76.918 3 -0.8968207728735821 0.27082489913866514 1.0 ['ENSG00000162889|ENST00000367103|MAPKAPK2', 'nc|ENSG00000162889|P49137-2|MAPKAPK2'] 18152 17913 EINTAHCTFA True PC9_epitope_Rep5 1105.4862442523302 1105.4851499358601 73.92 2 -0.896821573410064 0.27082489913866514 1.0 ['ENST00000261038.5_1_3:122598211-122598370:+|nuORF'] 22783 19653 EVDEYRRHWWR True NCI_RA007_Epitope_Rep1 1630.7753071579798 1630.7742099358602 80.636 2 -0.8968455904806194 0.27082489913866514 1.0 ['nc|ENSG00000010072|Q9H040-3|SPRTN', 'nc|ENSG00000010072|Q9H040-2|SPRTN', 'ENSG00000010072|ENST00000295050|SPRTN'] 137428 25573 YLLVKITRLG True PC9_epitope_Rep5 1174.74377926434 1174.7426899358602 103.67 2 -0.8968640346982332 0.27082489913866514 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 109382 6775 TGLPPSISRDP True NCI_RA007_Epitope_Rep1 1138.59823722946 1138.5971499358602 30.361 2 -0.8968763690364797 0.2708350783147667 1.0 ['ENST00000313552.10_1_2:242664606-242665164:+|nuORF'] 125201 16067 VLQLCPVL True PC9_epitope_Rep1 883.5201105799099 883.51900993586 66.617 2 -0.8969002515584188 0.27084525720667274 1.0 ['nc|ENSG00000156990|Q6P087-6|RPUSD3', 'nc|ENSG00000156990|Q6P087-2|RPUSD3', 'ENSG00000156990|ENST00000383820|RPUSD3', 'nc|ENSG00000156990|Q6P087|RPUSD3', 'ENST00000464783.1_1_3:9879702-9882102:-|nuORF'] 46829 6334 IVEHLEELENA True H1975_Epitope_Rep1 1294.6404959642598 1294.6393899358602 29.427 2 -0.8969635762780952 0.27086939527611814 1.0 ['ENSG00000140829|ENST00000268482|DHX38'] 96595 3960 SELVKKQELRF True NCI_RA007_Epitope_Rep5 1375.7823496010299 1375.78069490379 21.585 3 -0.8969816817304915 0.2708821887213847 1.0 ['ENSG00000188626|ENST00000563027|GOLGA8M', 'ENSG00000232653|ENST00000448387|GOLGA8N', 'ENSG00000206127|ENST00000509311|GOLGA8O'] 25007 26948 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 111.48 2 -0.8969898999374464 0.2708821887213847 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 934 10656 ADSIERRHKKN True NCI_RA007_Epitope_Rep1 1352.7272943363998 1352.72618993586 45.44 2 -0.8970321450340399 0.2708821887213847 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 9357 13857 AVTRHSPSI True PC9_epitope_Rep3 966.5246783663799 966.52358993586 58.381 2 -0.8970462940249121 0.2708821887213847 1.0 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 92730 24703 RRKKKRKKLCQ True H1975_Epitope_Rep2 1470.94053909162 1470.93889490379 101.58 3 -0.8971283355492482 0.27089876191672596 1.0 ['ENSG00000170396|ENST00000302277|ZNF804A', 'ZNF804A|p.P1071Qfs*25|1|0.28|ENSG00000170396|chr2:184938607-184938607|C/-|frameshift_variant'] 4392 10222 AIRRRHNA True H1975_Epitope_Rep3 992.5740286006398 992.57292993586 44.366 2 -0.897132046621138 0.27089876191672596 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 52266 3275 KNQDDDDDDD True PC9_epitope_Rep2 1193.39563381093 1193.39398490379 17.852 3 -0.8971400135783218 0.27089876191672596 1.0 ['nc|ENSG00000133114|Q8IXQ4-4|GPALPP1', 'ENSG00000133114|ENST00000379151|GPALPP1'] 107964 8272 TC[Carbamidomethyl]ECVFPPAYT True H1975_Epitope_Rep2 1286.5311461188496 1286.53004993586 36.77 2 -0.8971814564898517 0.2709089386410586 1.0 ['ENST00000599420.5_1_19:17312953-17313848:+|nuORF'] 41340 7691 IALIGSGW True PC9_epitope_Rep5 815.45413919507 815.45304993586 34.527 2 -0.8972519503476328 0.27092550979105895 1.0 ['SS18L1-GPR108|1|fusion', 'ENSG00000125734|ENST00000264080|GPR108'] 12460 23014 DKQLLISSSSA True NCI_RA007_Epitope_Rep2 1147.60846755999 1147.60736993586 96.027 2 -0.8972566098638685 0.27092550979105895 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 110576 15200 TISGEPALLP True H1975_Epitope_Rep1 996.5491617787198 996.54861496793 63.73 1 -0.8972903410217821 0.27092550979105895 1.0 ['nc|ENSG00000165802|Q6X4W1-4|NSMF', 'nc|ENSG00000165802|Q6X4W1-6|NSMF', 'nc|ENSG00000165802|Q6X4W1-3|NSMF', 'nc|ENSG00000165802|Q6X4W1-2|NSMF', 'ENSG00000165802|ENST00000371475|NSMF', 'nc|ENSG00000165802|Q6X4W1-5|NSMF'] 130735 6003 VVDPNDPQM-[Oxidation] True PC9_epitope_Rep5 1029.44371111445 1029.4426099358602 28.086 2 -0.8973158397497156 0.2709319041438122 1.0 ['ENSG00000151883|ENST00000281631|PARP8'] 93308 20530 RRRYLRRKER True NCI_RA007_Epitope_Rep5 1487.9021794369498 1487.90108993586 85.91 2 -0.8973252425106593 0.2709319041438122 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 71754 17742 MMRIRLLY True PC9_epitope_Rep5 1094.60927702082 1094.6081699358601 73.263 2 -0.8973707169070149 0.27096999302163294 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000494917.6_1_9:100069637-100105846:+|nuORF', 'ENST00000460482.6_1_9:100070037-100107975:+|nuORF', 'ENST00000529787.2_1_9:100053158-100088872:+|nuORF'] 45393 14923 ISDQNIIPSV True PC9_epitope_Rep2 1084.57643915572 1084.57534993586 62.663 2 -0.89737874171612 0.2709763858650142 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000482952.5_1_2:233671364-233680450:+|nuORF'] 84456 12021 QGLDGKPII True PC9_epitope_Rep5 939.5389314481899 939.53782993586 51.234 2 -0.8973819213133318 0.2709763858650142 1.0 ['nc|ENSG00000138347|Q86TC9-2|MYPN', 'ENSG00000138347|ENST00000358913|MYPN'] 118120 6354 VAVASGFAP True NCI_RA007_Epitope_Rep3 817.4334037504899 817.43230993586 31.997 2 -0.8975657973766735 0.2710208638615589 1.0 ['PACS1|p.S84F|1|0.17|ENSG00000175115|chr11:66070737-66070737|C/T|missense_variant'] 24952 21014 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 86.924 2 -0.8975975195677292 0.2710208638615589 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 45290 5108 ISAGGYIK True PC9_epitope_Rep4 807.44905381463 807.44794993586 26.302 2 -0.8976053881826681 0.2710208638615589 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 124933 18603 VLLVLGGG True PC9_epitope_Rep6 726.4639756027799 726.4634249679301 84.2 1 -0.8976304641046624 0.27103103717762644 1.0 ['SLC12A6|p.R1139L|1|0.36|ENSG00000140199|chr15:34233918-34233918|C/A|missense_variant'] 33584 10144 GLLALRSLSL True NCI_RA007_Epitope_Rep2 1041.65462990677 1041.6535299358602 44.046 2 -0.8976866947816079 0.2710412102097492 1.0 ['ENSG00000166159|ENST00000299194|LRTM2'] 38166 14778 HERRKRHREEQ True PC9_epitope_Rep3 1559.81415227819 1559.81251490379 61.98 3 -0.8977147637147203 0.27104381802958416 1.0 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000248333|P21127|CDK11B', 'nc|ENSG00000248333|P21127-6|CDK11B', 'nc|ENSG00000248333|P21127-9|CDK11B', 'nc|ENSG00000248333|P21127-8|CDK11B', 'nc|ENSG00000248333|P21127-3|CDK11B', 'ENSG00000248333|ENST00000341832|CDK11B', 'nc|ENSG00000008128|Q9UQ88-9|CDK11A', 'ENST00000598846.1_1_1:1636463-1654047:-|nuORF'] 12097 11228 DIFLEALGY True PC9_epitope_Rep1 1039.5226126777097 1039.5215099358602 48.068 2 -0.8977205269571865 0.27104381802958416 1.0 ['PDLIM5|p.M550I|2|0.45|ENSG00000163110|chr4:94662486-94662486|G/T|missense_variant'] 59088 9105 LGEASLTLGIA True H1975_Epitope_Rep1 1043.58627556343 1043.5851699358602 39.926 2 -0.8977404472267932 0.27104381802958416 1.0 ['ENST00000477269.5_1_13:113777169-113798523:+|nuORF'] 16254 9274 EEHKPVAVP True PC9_epitope_Rep3 1004.5290950404798 1004.52798993586 40.615 2 -0.897757963867018 0.27106794490727176 1.0 ['nc|ENSG00000118900|Q9NPG3-2|UBN1', 'ENSG00000118900|ENST00000262376|UBN1', 'ENST00000587027.1_1_16:4909049-4918847:+|nuORF'] 126638 10967 VPQGKGNVL True PC9_epitope_Rep5 910.5236157372199 910.52250993586 47.173 2 -0.8977696734092775 0.27107433403569486 1.0 ['nc|ENSG00000135052|Q8NBJ4-2|GOLM1', 'ENSG00000135052|ENST00000388712|GOLM1'] 81520 11394 PQTIKKTRFPH True NCI_RA007_Epitope_Rep1 1351.77245362367 1351.7713499358601 48.289 2 -0.8977952884798214 0.27107433403569486 1.0 ['ENST00000546727.5_1_12:113545343-113557136:-|nuORF'] 24897 16372 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 67.797 2 -0.8978375450048116 0.271084505469971 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 54735 6746 LAELRQRLQA True PC9_epitope_Rep5 1196.69895433024 1196.69731490379 30.919 3 -0.8979120391498336 0.271150491871904 1.0 ['nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 66837 6559 LSVSRSSGP True PC9_epitope_Rep5 888.46649478392 888.46538993586 30.2 2 -0.8979883071518877 0.27118478518704564 1.0 ['ENST00000603791.1_1_6:3751774-3752740:+|nuORF'] 70184 27474 LYLKHKLKTPP True PC9_epitope_Rep1 1336.8230922141997 1336.82198993586 112.41 2 -0.898008924191908 0.27118478518704564 1.0 ['TICAM1|p.R34P|1|0.19|ENSG00000127666|chr19:4818277-4818277|C/G|missense_variant'] 15531 4089 EARWEVEKHGN True NCI_RA007_Epitope_Rep2 1353.6425616529298 1353.64090490379 20.543 3 -0.8980477502659516 0.27120890774125134 1.0 ['nc|ENSG00000177338|Q8N7U9-2|LINC00469', 'nc|ENSG00000177338|Q8N7U9|LINC00469'] 78435 10285 PCCSFPRT True PC9_epitope_Rep3 909.38369376009 909.38258993586 44.508 2 -0.8980599430107531 0.2712190765882041 1.0 ['ENST00000281830.3_1_2:223919256-223919388:+|nuORF'] 116374 13695 TVYQNNVL True PC9_epitope_Rep1 949.4868958753299 949.48578993586 57.53 2 -0.8980850444665653 0.271225460786092 1.0 ['nc|ENSG00000056998|O15488-6|GYG2', 'GYG2|p.P319Afs*14|1|0.21|ENSG00000056998|chrX:2861538-2861539|-/G|frameshift_variant', 'ENST00000381161.5_1_X:2748138-2799251:+|nuORF', 'nc|ENSG00000056998|O15488-5|GYG2', 'nc|ENSG00000056998|O15488-4|GYG2', 'nc|ENSG00000056998|O15488-3|GYG2', 'ENSG00000056998|ENST00000398806|GYG2', 'nc|ENSG00000056998|O15488|GYG2'] 134974 10005 YAFWGAASF True PC9_epitope_Rep6 1018.4548674710599 1018.45376993586 49.045 2 -0.8981239256065019 0.271225460786092 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 13830 19324 DQWYLWYLRLL True PC9_epitope_Rep5 1567.8187351097497 1567.8170849037901 79.374 3 -0.8982310311743568 0.2712635338765487 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 92477 9823 RRAAWYCVLG True PC9_epitope_Rep5 1193.61278217813 1193.61168993586 42.751 2 -0.8982670748763928 0.27127370139383034 1.0 ['ENST00000424086.5_1_2:120436761-120437079:+|nuORF'] 66380 11429 LSRCLNTFDL True PC9_epitope_Rep1 1180.59104367404 1180.58938490379 48.84 3 -0.8982872341592233 0.2712762989006083 1.0 ['ENSG00000139514|ENST00000380752|SLC7A1'] 88725 14100 RCWWRWPRCYW True H1975_Epitope_Rep3 1696.7656115047598 1696.7645099358601 59.562 2 -0.8983004538353282 0.2712762989006083 1.0 ['ENST00000341500.9_1_19:7267817-7293934:-|nuORF'] 25006 17874 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 75.548 2 -0.898309987221036 0.2712762989006083 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 74601 16292 NLDPRRSRRQY True NCI_RA007_Epitope_Rep2 1459.77564151115 1459.77454993586 68.1 2 -0.8983844382203579 0.27130560941924864 1.0 ['ENST00000261973.11_1_14:73525348-73538344:+|nuORF', 'ENST00000527432.5_1_14:73525300-73544147:+|nuORF', 'ENST00000531500.5_2_14:73525300-73544147:+|nuORF'] 100464 7565 SLPGWKVEC True PC9_epitope_Rep6 1017.4953523840499 1017.49424993586 38.373 2 -0.8984107284229302 0.27130560941924864 1.0 ['ENSG00000124253|ENST00000319441|PCK1'] 133323 16757 WERPNFNIK True NCI_RA007_Epitope_Rep2 1202.6196413803798 1202.61854993586 69.914 2 -0.8984365541322066 0.27130560941924864 1.0 ['ENSG00000115364|ENST00000393909|MRPL19'] 111575 11206 TLNEDWLLWQV True H1975_Epitope_Rep3 1415.70851595443 1415.7074099358601 48.202 2 -0.8984548822217862 0.27130560941924864 1.0 ['ENSG00000136040|ENST00000258526|PLXNC1', 'ENST00000549187.1_1_12:94658920-94673460:+|nuORF'] 12548 7119 DLDALEHMFR True H1975_Epitope_Rep1 1245.58120726633 1245.58010993586 32.408 2 -0.8985000147060501 0.27130560941924864 1.0 ['ENSG00000105141|ENST00000427043|CASP14'] 119588 6438 VERPSRNRFHP True H1975_Epitope_Rep3 1393.73271407001 1393.7316099358602 29.741 2 -0.8985081044704141 0.27130560941924864 1.0 ['IQGAP1-CRTC3|1|fusion', 'IQGAP1-CRTC3|2|fusion', 'ENST00000560927.1_1_15:91083228-91137023:+|nuORF', 'nc|ENSG00000140577|Q6UUV7-3|CRTC3', 'ENSG00000140577|ENST00000268184|CRTC3'] 25023 21891 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 89.68 2 -0.8985656838720517 0.27130560941924864 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 46587 12942 ITRYFLCLQLR True PC9_epitope_Rep2 1424.7962258433597 1424.7951299358601 55.076 2 -0.8985690655073606 0.27131198995605776 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2'] 82465 6968 PVDRYRQILL True H1975_Epitope_Rep1 1271.7350054857898 1271.73334490379 31.843 3 -0.8985992282399454 0.27131198995605776 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 117552 7678 VAGEHSVSGWS True H1975_Epitope_Rep1 1114.50433684462 1114.5032299358602 34.5 2 -0.89862282824089 0.2713183701368449 1.0 ['UBR4|p.R2914W|1|0.31|ENSG00000127481|chr1:19138173-19138173|G/A|missense_variant'] 134160 8325 WRKEDCQRFYR True H1975_Epitope_Rep1 1585.75721456569 1585.7561099358602 36.954 2 -0.8986687876648567 0.2713183701368449 1.0 ['nc|ENSG00000172113|O75414-3|NME6', 'nc|ENSG00000172113|O75414-2|NME6', 'ENSG00000172113|ENST00000442597|NME6'] 25855 14228 FGGEYFKEE True NCI_RA007_Epitope_Rep4 1104.4763907612798 1104.47528993586 62.008 2 -0.8987056935411021 0.2713337238820543 1.0 ['ENSG00000124608|ENST00000244571|AARS2'] 120353 15498 VFQKSRFAP True PC9_epitope_Rep2 1078.5923640033798 1078.59126993586 64.886 2 -0.8987188553238319 0.2713337238820543 1.0 ['ENSG00000162227|ENST00000294168|TAF6L'] 113004 8439 TPTEEASLP True H1975_Epitope_Rep1 943.4498416602698 943.4492949679301 37.387 1 -0.8987504675522074 0.2713337238820543 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 73112 13072 NDRRFYSERYK True NCI_RA007_Epitope_Rep1 1532.7484237038 1532.74732993586 54.84 2 -0.8987547043091387 0.2713337238820543 1.0 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 24947 19650 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 81.383 2 -0.8987571808403597 0.2713337238820543 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 36014 16247 GVDFEGTF True PC9_epitope_Rep1 870.37594844402 870.37484993586 67.312 2 -0.8987850676655044 0.2713337238820543 1.0 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 25695 16481 FFFREQKQKSK True NCI_RA007_Epitope_Rep2 1471.7935829910696 1471.7924899358602 68.836 2 -0.8987923061445435 0.2713337238820543 1.0 ['ENST00000370872.7_1_1:75171763-75171883:-|nuORF'] 138672 26202 YRSVLIRH True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 106.13 2 -0.8988602367255547 0.27133512782248503 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 128218 21867 VRVGLLLGGGG True H1975_Epitope_Rep3 996.6080140675198 996.60690993586 91.42 2 -0.8988837462041434 0.27133512782248503 1.0 ['nc|ENSG00000143183|Q9UM00|TMCO1', 'nc|ENSG00000143183|Q9UM00-2|TMCO1'] 138670 24670 YRSVLIRH True NCI_RA007_Epitope_Rep2 1042.60359739342 1042.60250993586 103.71 2 -0.898960734878014 0.27133512782248503 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 30605 6795 GALAALASL True H1975_Epitope_Rep2 785.46470387877 785.46360993586 31.052 2 -0.8989637452923823 0.27133512782248503 1.0 ['ENST00000377834.8_1_1:6478873-6479209:-|nuORF'] 138671 26089 YRSVLIRH True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 105.61 2 -0.8989690661537747 0.27133512782248503 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 71256 3265 MGFWCGCAFC True PC9_epitope_Rep2 1123.37478595251 1123.37368993586 17.81 2 -0.8989751809196095 0.27133512782248503 1.0 ['chr1:245814415-245816795|376|16.24|0.01|10.82|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|84', 'chr1:245764149-245816795|362|34.57|0.05|9.58|-|2|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|84'] 63845 12264 LPTNPEESWQV True NCI_RA007_Epitope_Rep2 1298.61428121642 1298.6131899358602 52.304 2 -0.8989757753315559 0.27133512782248503 1.0 ['nc|ENSG00000130558|Q99784-3|OLFM1', 'nc|ENSG00000130558|Q99784-4|OLFM1', 'nc|ENSG00000130558|Q99784-5|OLFM1', 'ENSG00000130558|ENST00000371793|OLFM1', 'nc|ENSG00000130558|Q99784-2|OLFM1'] 121527 16319 VGKKKRAN True NCI_RA007_Epitope_Rep4 899.5664836087099 899.56593496793 70.768 1 -0.8990539532617311 0.2713452902290034 1.0 ['ENST00000464470.1_1_13:32999202-32999613:-|nuORF'] 24971 17560 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 77.037 2 -0.8990586717357913 0.2713554523520634 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 12544 11003 DLCPMGFKQQY True H1975_Epitope_Rep2 1328.58932942188 1328.58822993586 47.35 2 -0.8990794871905664 0.2713682067301658 1.0 ['ENSG00000166188|ENST00000299237|ZNF319'] 24946 19248 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 79.761 2 -0.8990966449414616 0.2713682067301658 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 62565 17111 LLTREISRHP True H1975_Epitope_Rep2 1220.69895433024 1220.6978499358602 71.091 2 -0.8990995117024918 0.2713682067301658 1.0 ['ENST00000486015.1_1_10:77162714-77167299:+|nuORF'] 40689 5858 HTM[Oxidation]AQIM[Oxidation]AEQ True NCI_RA007_Epitope_Rep2 1190.50599448162 1190.50488993586 27.405 2 -0.8991012695379476 0.2713682067301658 1.0 ['nc|ENSG00000125869|Q9UJQ1-2|LAMP5', 'ENSG00000125869|ENST00000246070|LAMP5'] 27500 8753 FPEITRRKCFP True H1975_Epitope_Rep1 1392.7336255868 1392.7325299358602 38.599 2 -0.8991382123959417 0.2714062587159034 1.0 ['ENST00000500537.2_1_11:112831441-112833979:-|nuORF'] 55413 7085 LATEPPPG True PC9_epitope_Rep5 780.4017692690398 780.40066993586 32.218 2 -0.8992138582141264 0.27141263422116857 1.0 ['ENST00000460852.1_1_1:202302426-202304891:-|nuORF', 'ENST00000487227.5_1_1:202302298-202304891:-|nuORF', 'ENSG00000077152|ENST00000646651|UBE2T'] 11091 5120 DECKVHKEGYN True H1975_Epitope_Rep2 1320.5768501618797 1320.57520490379 24.77 3 -0.8992520608888781 0.27141263422116857 1.0 ['ENSG00000160321|ENST00000397126|ZNF208', 'nc|ENSG00000160321|O43345-2|ZNF208', 'nc|ENSG00000188171|Q68DY1-2|ZNF626', 'ENSG00000188171|ENST00000601440|ZNF626', 'ZNF208|p.G727Afs*15|1|0.3|ENSG00000160321|chr19:21972854-21972854|C/-|frameshift_variant', 'nc|ENSG00000167232|Q05481-2|ZNF91', 'ENSG00000167232|ENST00000300619|ZNF91', 'ENSG00000213967|ENST00000594466|ZNF726'] 28039 20538 FRCFTLKKRRR True NCI_RA007_Epitope_Rep5 1509.88268986233 1509.8815899358601 85.94 2 -0.8993097841561063 0.27143932844353963 1.0 ['chr18:63588981-63589656|121|19.42|0.45|5.43|+|1|None,SERPINB13|1'] 56638 15885 LDYYWWLLFPV True H1975_Epitope_Rep1 1513.76457427857 1513.76346993586 66.412 2 -0.8993252608187512 0.27143932844353963 1.0 ['ENSG00000132874|ENST00000255226|SLC14A2'] 128061 16396 VRRLPGGG True H1975_Epitope_Rep3 810.4824196315798 810.48132993586 68.54 2 -0.8993523954266538 0.27143932844353963 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 38021 19275 HEIILKAAQE True PC9_epitope_Rep6 1150.6346227381798 1150.63352993586 86.788 2 -0.8993688095859803 0.27143932844353963 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 56651 5317 LEAAGDKF True NCI_RA007_Epitope_Rep5 849.42323298961 849.42212993586 27.145 2 -0.8994131974840528 0.2714837486230601 1.0 ['ENST00000441872.2_1_10:121442696-121443334:-|nuORF'] 54609 9196 LADGNVKAFY True NCI_RA007_Epitope_Rep5 1096.5553097883198 1096.5542099358602 42.023 2 -0.899423289543579 0.2714837486230601 1.0 ['ENSG00000104450|ENST00000388798|SPAG1'] 128811 22408 VSRRAAQL True PC9_epitope_Rep4 899.5300980999898 899.5295449679301 94.424 1 -0.8994325106403228 0.2714837486230601 1.0 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 140007 15582 YVLDPEDYGP True H1975_Epitope_Rep2 1166.5131701928199 1166.5115249037901 65.092 3 -0.8994681563277236 0.27152179369196017 1.0 ['ENSG00000243284|ENST00000368100|VSIG8'] 60837 24535 LKKVLKKIVKE True NCI_RA007_Epitope_Rep1 1324.9169925990398 1324.9158899358602 101.64 2 -0.8994848350252456 0.2715281650864473 1.0 ['ENSG00000055044|ENST00000264279|NOP58', 'ENST00000488403.5_1_2:203130664-203149205:+|nuORF', 'ENST00000478941.1_1_2:203147084-203155055:+|nuORF', 'ENST00000472050.5_1_2:203130664-203149064:+|nuORF'] 58670 20070 LFHWRTRLRRK True H1975_Epitope_Rep1 1567.93241693607 1567.93130993586 83.516 2 -0.899486219449221 0.2715281650864473 1.0 ['ENST00000560110.1_1_15:44968687-44968816:-|nuORF', 'ENST00000558573.1_1_15:44968687-45003294:-|nuORF'] 68917 13483 LVFFFFFFLRQ True H1975_Epitope_Rep3 1509.8172785577697 1509.8161899358602 57.138 2 -0.8994932197965564 0.2715307502474799 1.0 ['ENST00000294008.3_1_16:3632019-3632346:-|nuORF'] 107865 4489 TASFTQKL True NCI_RA007_Epitope_Rep4 894.4810822188998 894.47998993586 23.651 2 -0.8995125104240139 0.2715307502474799 1.0 ['ENST00000373883.3_1_2:220408769-220409425:+|nuORF', 'ENST00000421791.1_3_2:220408769-220409493:+|nuORF', 'ENST00000344458.6_1_2:220408458-220409493:+|nuORF'] 86026 6172 QPKAMLGP True NCI_RA007_Epitope_Rep2 840.4527592960799 840.45166993586 28.616 2 -0.8995533419429671 0.2715307502474799 1.0 ['ENSG00000188112|ENST00000341865|C6orf132'] 78014 6824 PALLSTC[Carbamidomethyl]GFC True NCI_RA007_Epitope_Rep1 1067.4779883471801 1067.47688993586 30.55 2 -0.8995616521977261 0.27153712094806554 1.0 ['ENST00000216211.8_1_22:45689086-45691455:+|nuORF'] 69075 6814 LVIRDAQREDE True H1975_Epitope_Rep3 1342.6840921117398 1342.6829899358602 31.163 2 -0.8996065455585859 0.27153712094806554 1.0 ['nc|ENSG00000161643|A6NMB1|SIGLEC16', 'nc|ENSG00000161640|Q96RL6-2|SIGLEC11', 'ENSG00000161640|ENST00000447370|SIGLEC11'] 92476 16317 RRAALEAAAA True NCI_RA007_Epitope_Rep5 998.5621265042598 998.56102993586 69.519 2 -0.8996490297308755 0.27157516102947327 1.0 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598'] 90031 9420 RGGGGGGC True H1975_Epitope_Rep2 619.2496428154301 619.2490949679301 41.202 1 -0.8996578257673548 0.2715815302252956 1.0 ['ENST00000301785.5_1_11:62482560-62482752:-|nuORF'] 56007 12902 LDIYWTVHRAR True H1975_Epitope_Rep3 1428.76261721596 1428.7615299358602 54.854 2 -0.8996590079546165 0.2715815302252956 1.0 ['nc|ENSG00000146013|O60609-2|GFRA3', 'ENSG00000146013|ENST00000274721|GFRA3'] 100214 21720 SLLLLKIVKF True H1975_Epitope_Rep2 1172.7896668276 1172.78856993586 89.848 2 -0.8997199071192653 0.2715841128661248 1.0 ['ENST00000367941.6_1_6:132779201-132779417:-|nuORF'] 90809 25536 RKSGATGG True PC9_epitope_Rep2 732.3878505403999 732.38730496793 103.91 1 -0.8997223303741662 0.2715841128661248 1.0 ['nc|ENSG00000153827|Q14669|TRIP12', 'nc|ENSG00000153827|Q14669-2|TRIP12', 'nc|ENSG00000153827|Q14669-3|TRIP12', 'ENSG00000153827|ENST00000675903|TRIP12', 'ENST00000479037.5_1_2:230672327-230744801:-|nuORF'] 118232 4388 VAYPVWPYAQP True NCI_RA007_Epitope_Rep5 1289.6444591458899 1289.64280490379 23.504 3 -0.8997621121432567 0.2715841128661248 1.0 ['ENST00000560542.1_1_14:24633743-24634393:+|nuORF'] 114127 21445 TRSELLPFL True PC9_epitope_Rep5 1074.6073453611798 1074.6062499358602 87.543 2 -0.8997794422309453 0.2715942675514415 1.0 ['ENSG00000105568|ENST00000322088|PPP2R1A', 'PPP2R1A|p.Q325*|1|0.21|ENSG00000105568|chr19:52216054-52216055|CA/T|frameshift_variant', 'ENST00000468280.5_1_19:52693376-52714746:+|nuORF', 'nc|ENSG00000137713|P30154-2|PPP2R1B', 'nc|ENSG00000137713|P30154-5|PPP2R1B', 'ENSG00000137713|ENST00000527614|PPP2R1B', 'nc|ENSG00000137713|P30154-4|PPP2R1B'] 117330 11222 VAALAAWL True PC9_epitope_Rep1 813.47487463965 813.47376993586 48.046 2 -0.8998623747019817 0.2716462437093109 1.0 ['ENSG00000135116|ENST00000257572|HRK'] 90661 14447 RKLEGRRKEWM True H1975_Epitope_Rep1 1487.81433551899 1487.8132299358601 60.767 2 -0.8998852918736542 0.2716703376362673 1.0 ['ENST00000430321.5_1_2:170821003-170871346:+|nuORF'] 90185 24961 RHHLLGGLL True PC9_epitope_Rep5 1014.6086827738599 1014.60758993586 101.19 2 -0.8999243772896068 0.2716804906949188 1.0 ['ENST00000369037.8_1_6:107655524-107780637:-|nuORF'] 9432 8547 AVVRPHAL True PC9_epitope_Rep1 861.5184707871298 861.51736993586 37.713 2 -0.8999730487554547 0.271690643470503 1.0 ['CSN3|p.Q92L|1|0.09|ENSG00000171209|chr4:70249185-70249185|A/T|missense_variant'] 111085 20503 TLEDYREP True PC9_epitope_Rep5 1021.47163973401 1021.47054993586 83.905 2 -0.9001361444737944 0.2717338276905064 1.0 ['nc|ENSG00000073737|Q9BPW9-3|DHRS9', 'ENSG00000073737|ENST00000674881|DHRS9', 'nc|ENSG00000073737|Q9BPW9-4|DHRS9'] 72673 21205 MYFHSNQLS True PC9_epitope_Rep1 1125.49132963277 1125.49022993586 86.396 2 -0.9001387409611498 0.2717338276905064 1.0 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 77073 15651 NWLYCWLY True H1975_Epitope_Rep3 1159.51608782863 1159.51498993586 65.618 2 -0.9001517063393422 0.2717338276905064 1.0 ['ENST00000473576.6_1_13:50235206-50237234:-|nuORF', 'EBPL|p.F172Lfs*7|1|0.15|ENSG00000123179|chr13:49661073-49661073|A/-|frameshift_variant', 'ENSG00000123179|ENST00000242827|EBPL', 'ENST00000378270.5_1_13:50235106-50265589:-|nuORF'] 86384 23552 QQLLLLGGGG True PC9_epitope_Rep6 954.5498304850598 954.54872993586 103.74 2 -0.9001658772128726 0.2717338276905064 1.0 ['ENSG00000168806|ENST00000305641|LCMT2', 'ENST00000567039.1_1_15:43620629-43622752:-|nuORF'] 25020 19922 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 82.028 2 -0.9001671507657836 0.2717338276905064 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 87489 8739 QTFLDIPLHEK True H1975_Epitope_Rep1 1339.7136013348697 1339.71250993586 38.543 2 -0.9001733515142541 0.2717338276905064 1.0 ['ENSG00000253710|ENST00000521508|ALG11'] 80240 14812 PLCNLSDVPP True H1975_Epitope_Rep2 1053.51648175145 1053.5153899358602 62.132 2 -0.9002026252409381 0.2717338276905064 1.0 ['ENST00000560489.2_1_15:49658263-49658881:-|nuORF'] 18851 13550 ELEFVKRIIHD True H1975_Epitope_Rep1 1397.76669953689 1397.76560993586 57.244 2 -0.9002095255398594 0.27174397859054417 1.0 ['ENSG00000127804|ENST00000263092|METTL16', 'ENST00000574752.5_1_17:2340122-2367575:-|nuORF'] 71164 18059 MEWCIWLMY True PC9_epitope_Rep5 1273.53339476889 1273.53175490379 74.477 3 -0.9002491082534854 0.27174655386287927 1.0 ['ENST00000446859.5_1_3:169514113-169514143:-|nuORF'] 55961 12970 LDIDMFHLL True NCI_RA007_Epitope_Rep2 1115.56851732431 1115.56740993586 55.075 2 -0.9002576584001725 0.27174655386287927 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2'] 19807 13111 ELTNAQLQ True PC9_epitope_Rep2 915.46616043075 915.46506993586 55.707 2 -0.9002594951094666 0.27174655386287927 1.0 ['ENST00000554270.5_1_14:88936247-89016761:-|nuORF', 'ENSG00000070778|ENST00000556564|PTPN21'] 119056 9114 VEGTARGVVV True PC9_epitope_Rep3 985.5556441414898 985.55454993586 39.995 2 -0.9003198602672422 0.2717706416903607 1.0 ['ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENST00000485672.2_1_19:42488766-42489464:-|nuORF'] 135694 11834 YEIHPTKSF True NCI_RA007_Epitope_Rep4 1120.55530978832 1120.5542099358602 52.5 2 -0.9003836408727801 0.2717948717948718 1.0 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET', 'nc|ENSG00000105976|P08581-3|MET'] 13060 21734 DLRKKTETF True PC9_epitope_Rep5 1136.61897267404 1136.6178699358602 88.632 2 -0.9003880035703352 0.2717948717948718 1.0 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27'] 60747 6670 LKDQVGRDQF True H1975_Epitope_Rep1 1204.6200353031998 1204.61892993586 30.709 2 -0.9003891105101187 0.2717948717948718 1.0 ['TTLL5-RGS6|2|fusion', 'TTLL5-RGS6|5|fusion', 'TTLL5-RGS6|1|fusion', 'TTLL5-RGS6|8|fusion', 'TTLL5-RGS6|4|fusion', 'TTLL5-RGS6|6|fusion', 'TTLL5-RGS6|7|fusion', 'TTLL5-RGS6|3|fusion', 'nc|ENSG00000182732|P49758-14|RGS6', 'ENSG00000182732|ENST00000553525|RGS6', 'nc|ENSG00000182732|P49758-2|RGS6', 'nc|ENSG00000182732|P49758-15|RGS6', 'nc|ENSG00000182732|P49758|RGS6', 'nc|ENSG00000182732|P49758-8|RGS6', 'nc|ENSG00000182732|P49758-5|RGS6', 'nc|ENSG00000182732|P49758-16|RGS6', 'nc|ENSG00000182732|P49758-9|RGS6', 'nc|ENSG00000182732|P49758-10|RGS6', 'nc|ENSG00000182732|P49758-7|RGS6', 'nc|ENSG00000182732|P49758-11|RGS6', 'nc|ENSG00000182732|P49758-6|RGS6', 'RGS6|p.D403Ifs*7|1|0.18|ENSG00000182732|chr14:72518465-72518465|G/-|frameshift_variant', 'nc|ENSG00000182732|P49758-12|RGS6', 'nc|ENSG00000182732|P49758-13|RGS6'] 78901 15463 PEVTCSRQ True NCI_RA007_Epitope_Rep5 918.4229157197799 918.42180993586 66.175 2 -0.9003999121426371 0.2717948717948718 1.0 ['ENST00000226091.2_1_17:7613719-7613785:+|nuORF'] 24992 17135 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 74.229 2 -0.9004465859831566 0.2717948717948718 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 45997 21291 ISTIVPNMV True PC9_epitope_Rep1 972.5314035396 972.53030993586 86.722 2 -0.9005261930458875 0.2717948717948718 1.0 ['OR2L2|p.K79N|1|0.17|ENSG00000203663|chr1:248038504-248038504|G/C|missense_variant'] 111461 20489 TLLEEEYFR True PC9_epitope_Rep5 1198.5870038394198 1198.5859099358602 83.851 2 -0.9005317375486002 0.2717948717948718 1.0 ['nc|ENSG00000116062|P52701-4|MSH6', 'nc|ENSG00000116062|P52701-3|MSH6', 'ENSG00000116062|ENST00000234420|MSH6', 'nc|ENSG00000116062|P52701-2|MSH6'] 10153 25465 CCCCCGGG True H1975_Epitope_Rep1 704.1208797689599 704.1203249679301 105.51 1 -0.9005406186709412 0.2717948717948718 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 62679 18378 LLWGWGLLS True PC9_epitope_Rep5 1043.5804023373498 1043.57930993586 75.709 2 -0.9005525090684657 0.2717948717948718 1.0 ['ENST00000531976.1_1_11:1490730-1491405:-|nuORF'] 73346 19310 NENHLFSYFNL True PC9_epitope_Rep4 1396.6411646706 1396.64006993586 82.383 2 -0.9005721540032917 0.2717948717948718 1.0 ['ENST00000266604.6_1_12:66517251-66517542:-|nuORF'] 23775 4481 EYIYQFFEDKR True H1975_Epitope_Rep3 1536.7248942945596 1536.7232549037901 22.354 3 -0.9005901555962156 0.2717948717948718 1.0 ['ENSG00000158077|ENST00000299481|NLRP14', 'NLRP14|p.W373Gfs*7|1|0.31|ENSG00000158077|chr11:7043143-7043143|T/-|frameshift_variant'] 49449 7975 KIRLKFKEF True PC9_epitope_Rep6 1207.7441136175096 1207.74247490379 40.135 3 -0.9006300527200201 0.2717948717948718 1.0 ['PLCL1|p.I287F|1|0.33|ENSG00000115896|chr2:198084376-198084376|A/T|missense_variant'] 128073 23327 VRRLPGGG True PC9_epitope_Rep4 810.4824196315798 810.48132993586 97.987 2 -0.9006312038537029 0.27180501943952845 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 7790 6548 ASVSHPPP True NCI_RA007_Epitope_Rep3 790.39735259494 790.3962499358599 32.803 2 -0.9006932901953213 0.27183546067666237 1.0 ['ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000470260.1_1_7:99752636-99753198:-|nuORF', 'nc|ENSG00000146826|Q8WVR3-2|TRAPPC14', 'ENST00000448720.5_1_7:99752636-99754020:-|nuORF', 'nc|ENSG00000146826|Q8WVR3-3|TRAPPC14', 'ENST00000394035.6_2_7:99752636-99754020:-|nuORF'] 75127 7232 NMVGLSYPPAV True H1975_Epitope_Rep1 1146.5743309807401 1146.5732299358601 32.828 2 -0.9006994324284576 0.27183546067666237 1.0 ['nc|ENSG00000154678|Q14123-2|PDE1C', 'ENSG00000154678|ENST00000396191|PDE1C', 'nc|ENSG00000154678|Q14123-3|PDE1C'] 49391 21744 KIIPWRLYT True PC9_epitope_Rep2 1188.70191445236 1188.70027490379 89.112 3 -0.9007031973331391 0.27183546067666237 1.0 ['nc|ENSG00000119682|O15033-2|AREL1', 'ENST00000557401.5_1_14:75130603-75152321:-|nuORF', 'ENSG00000119682|ENST00000356357|AREL1', 'ENST00000469797.5_1_14:75137455-75152321:-|nuORF'] 24943 17302 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 72.038 2 -0.9007129712378926 0.27184560719013445 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 137423 24858 YLLVKITRLG True NCI_RA007_Epitope_Rep1 1174.74377926434 1174.7426899358602 102.89 2 -0.9007554660511568 0.2718658993687907 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 30068 8956 FYLNMYASIY True H1975_Epitope_Rep1 1283.58964669171 1283.58854993586 39.353 2 -0.9007861767421743 0.2718658993687907 1.0 ['GPR17|p.S351Afs*11|1|0.13|ENSG00000144230|chr2:127651696-127651696|C/-|frameshift_variant', 'ENSG00000144230|ENST00000486700|GPR17', 'nc|ENSG00000144230|Q13304|GPR17', 'ENST00000486700.1_1_2:128403737-128409326:+|nuORF'] 24942 17165 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 71.508 2 -0.9008238935397325 0.27189633551623243 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 122689 6483 VGTTFNEAK True PC9_epitope_Rep5 965.4818104948899 965.48070993586 29.909 2 -0.9008920987116458 0.27189633551623243 1.0 ['OR2G2|p.E201K|1|0.21|ENSG00000177489|chr1:247588960-247588960|G/A|missense_variant'] 104468 10804 SSLSAPRSYTP True H1975_Epitope_Rep2 1164.5775017848798 1164.57640993586 46.586 2 -0.9009374293766222 0.27189633551623243 1.0 ['ENST00000529639.5_1_11:64889239-64889627:-|nuORF'] 19249 18951 ELLFLFLWKWK True NCI_RA007_Epitope_Rep2 1521.87479343389 1521.87368993586 78.562 2 -0.9009495034716668 0.2719128363033453 1.0 ['ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 13540 18518 DPIVLLPCDLP True PC9_epitope_Rep6 1193.6365968841299 1193.63548993586 83.871 2 -0.900956948948066 0.2719128363033453 1.0 ['ENSG00000176454|ENST00000314891|LPCAT4', 'ENST00000566581.5_1_15:34656349-34659376:-|nuORF'] 58553 11461 LFDRISESY True H1975_Epitope_Rep2 1128.54513902744 1128.5440499358601 49.14 2 -0.9009735291713489 0.2719128363033453 1.0 ['ENSG00000166262|ENST00000299338|FAM227B'] 79402 6776 PGLSSIFLPR True NCI_RA007_Epitope_Rep4 1085.62332977849 1085.62222993586 32.683 2 -0.9010255407787573 0.271947056774643 1.0 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-4|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 5379 5795 ALTVKEGDH True NCI_RA007_Epitope_Rep4 968.4927095317598 968.49160993586 28.914 2 -0.9010607650005776 0.271947056774643 1.0 ['ENSG00000106086|ENST00000449726|PLEKHA8', 'nc|ENSG00000293316|O95397|PLEKHA8P1', 'ENST00000256692.5_1_12:45566975-45568244:-|nuORF'] 72648 8842 MWNWMVSL True PC9_epitope_Rep2 1065.47759414493 1065.4764899358602 39.364 2 -0.9010756836863226 0.2719534112598743 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 86202 9498 QPVLSQTEA True PC9_epitope_Rep3 971.4923751785899 971.49126993586 41.483 2 -0.9010978458992205 0.2719534112598743 1.0 ['ENSG00000159377|ENST00000290541|PSMB4', 'ENST00000474100.1_1_1:151372658-151373852:+|nuORF', 'ENST00000493673.1_1_1:151373717-151374107:+|nuORF'] 93580 6584 RSSRHQTLPER True H1975_Epitope_Rep1 1365.72254330913 1365.72088490379 30.385 3 -0.9011190689488946 0.2719635542924016 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'nc|ENSG00000176208|Q96QE3-2|ATAD5'] 118184 13746 VAVTGLHVVL True PC9_epitope_Rep5 1006.6175161220599 1006.61640993586 57.895 2 -0.9012033036291698 0.27197626145830434 1.0 ['ENST00000399215.5_1_21:37431931-37432327:-|nuORF'] 5427 13392 ALWEWIALS True PC9_epitope_Rep6 1087.5702315764697 1087.56912993586 63.183 2 -0.9012058265217101 0.27197626145830434 1.0 ['BRINP3|p.L565Ffs*18|1|0.4|ENSG00000162670|chr1:190098624-190098625|-/A|frameshift_variant', 'BRINP3|p.Q696Rfs*9|1|0.11|ENSG00000162670|chr1:190098233-190098233|G/-|frameshift_variant', 'ENSG00000162670|ENST00000367462|BRINP3'] 104597 4484 SSTCMVPSTPP True H1975_Epitope_Rep2 1105.47838199057 1105.4772899358602 22.361 2 -0.9012206978832324 0.27197626145830434 1.0 ['ENST00000496139.5_1_22:47158670-47188605:+|nuORF'] 103961 24707 SRQFQYLHV True PC9_epitope_Rep4 1176.6039913162401 1176.60235490379 103.53 3 -0.9012456119457164 0.27197626145830434 1.0 ['ENSG00000125755|ENST00000245934|SYMPK'] 126247 9253 VPGYTANG True PC9_epitope_Rep1 777.36571811349 777.36516496793 40.444 1 -0.9014260377735126 0.2719965451911289 1.0 ['ENSG00000137975|ENST00000370565|CLCA2'] 113248 10444 TQEELMNSNQM True H1975_Epitope_Rep2 1323.54350142827 1323.5424099358602 45.189 2 -0.9014290273730527 0.2719965451911289 1.0 ['ENSG00000136935|ENST00000373555|GOLGA1'] 24901 17097 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 70.635 2 -0.9014559980625797 0.27201303857244347 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 4079 10246 AHSHSYSH True PC9_epitope_Rep5 924.3838277891202 924.38272993586 44.398 2 -0.9014652828025784 0.27201303857244347 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 60760 15569 LKELDESKAY True H1975_Epitope_Rep2 1194.61321858726 1194.6121299358601 65.042 2 -0.9014919288748388 0.27201303857244347 1.0 ['ENSG00000145331|ENST00000394876|TRMT10A'] 93850 12498 RVFRALLVQWD True NCI_RA007_Epitope_Rep1 1401.7881036878098 1401.7870099358602 52.593 2 -0.9015065407766046 0.27201939015726645 1.0 ['ENST00000327097.4_1_2:119739014-119739962:+|nuORF'] 138807 9644 YSDHHRLMSC True H1975_Epitope_Rep1 1247.51756146395 1247.5164699358602 42.024 2 -0.9015187652330222 0.27201939015726645 1.0 ['ENST00000431717.6_2_3:111812256-111821694:+|nuORF'] 14145 14067 DSICQRRRNRN True NCI_RA007_Epitope_Rep1 1416.7116613555997 1416.7105699358601 58.747 2 -0.9015541652449162 0.2720434600919348 1.0 ['IMMT|p.V738Sfs*43|1|0.11|ENSG00000132305|chr2:86144333-86144334|-/T|frameshift_variant'] 63090 13709 LNMERNNRYQP True PC9_epitope_Rep3 1433.68338091909 1433.6822899358601 57.812 2 -0.9015784436727253 0.27204981056385114 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|11|1|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|7|1|sense'] 36977 7653 GVRMFRWERS True PC9_epitope_Rep4 1322.6666086561397 1322.66497490379 36.819 3 -0.9015838484584927 0.27204981056385114 1.0 ['nc|ENSG00000005448|Q9H977-4|WDR54'] 97232 9014 SFLPSPSPQP True H1975_Epitope_Rep2 1055.5287606873098 1055.52766993586 39.624 2 -0.9016136420163029 0.2720587211164812 1.0 ['MED15|p.V609Cfs*38|1|0.2|ENSG00000099917|chr22:20584875-20584875|G/-|frameshift_variant', 'MED15|p.Q615Afs*53|1|0.11|ENSG00000099917|chr22:20584891-20584892|-/A|frameshift_variant', 'MED15|p.A683Gfs*30|1|0.14|ENSG00000099917|chr22:20585181-20585182|-/G|frameshift_variant', 'ENSG00000099917|ENST00000263205|MED15', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15', 'ENST00000489651.5_1_22:20929276-20940988:+|nuORF', 'ENST00000493216.1_1_22:20937040-20937274:+|nuORF', 'ENST00000473244.5_1_22:20936789-20940988:+|nuORF', 'ENST00000492381.5_1_22:20909161-20940988:+|nuORF'] 97251 18448 SFNDFRSI True PC9_epitope_Rep5 984.46649478392 984.46538993586 75.981 2 -0.9016156353446529 0.2720587211164812 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 17641 4770 EHQIAVQYLQM True H1975_Epitope_Rep3 1358.66527124346 1358.66362490379 23.474 3 -0.9016416546630787 0.2720587211164812 1.0 ['nc|ENSG00000148737|Q9NQB0-9|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-4|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-6|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-2|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-7|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-5|TCF7L2', 'nc|ENSG00000148737|Q9NQB0-3|TCF7L2', 'ENSG00000148737|ENST00000355995|TCF7L2'] 26609 5311 FKKQQRKFQY True PC9_epitope_Rep3 1399.77245362367 1399.7707949037901 25.505 3 -0.9016910170056245 0.2720587211164812 1.0 ['ENSG00000146834|ENST00000310512|MEPCE'] 79336 21565 PGKRLIDRIVE True PC9_epitope_Rep6 1294.7721192705 1294.77102993586 95.826 2 -0.9017002456900718 0.2720587211164812 1.0 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 84247 12745 QEVMHSLVKLT True PC9_epitope_Rep1 1283.6907577153097 1283.6896699358601 53.899 2 -0.9017079451793649 0.2720688598568205 1.0 ['EXOC2|p.A883Pfs*18|1|0.19|ENSG00000112685|chr6:489013-489013|C/-|frameshift_variant', 'ENSG00000112685|ENST00000230449|EXOC2'] 24871 19485 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 81.665 2 -0.9018362459831283 0.2721068538559033 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 140384 16146 YYERRWEQSLR True NCI_RA007_Epitope_Rep2 1584.7797238320798 1584.7786299358602 67.53 2 -0.9019179230987853 0.27214740331183934 1.0 ['ENSG00000167113|ENST00000300452|COQ4', 'nc|ENSG00000167113|Q9Y3A0-2|COQ4'] 68621 12951 LVACLCVLLL True PC9_epitope_Rep3 1058.62319574946 1058.62208993586 54.84 2 -0.9019635993391674 0.27214740331183934 1.0 ['ENSG00000103257|ENST00000261622|SLC7A5'] 37433 13862 GWPGAGPL True PC9_epitope_Rep1 753.38097425481 753.37986993586 58.16 2 -0.9019998416797127 0.27214740331183934 1.0 ['ENSG00000181585|ENST00000643606|TMIE'] 6149 11157 APPAKVSVVP True PC9_epitope_Rep2 963.5753169569099 963.57420993586 48.241 2 -0.9020137230605177 0.27214740331183934 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 20084 14246 ENGTLLFHI True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 66.688 2 -0.9020366347437819 0.27217146677065346 1.0 ['ASTN1|p.V1147Wfs*10|1|0.26|ENSG00000152092|chr1:176876562-176876562|G/-|frameshift_variant', 'nc|ENSG00000152092|O14525-3|ASTN1', 'ENSG00000152092|ENST00000361833|ASTN1', 'nc|ENSG00000152092|O14525|ASTN1', 'ASTN1|p.H123D|1|0.32|ENSG00000152092|chr1:177061182-177061182|G/C|missense_variant', 'ASTN1|p.L275Cfs*23|2|0.41|ENSG00000152092|chr1:177032498-177032498|G/-|frameshift_variant', 'ENST00000281881.7_1_1:176905297-177133812:-|nuORF'] 103216 25314 SQRKWKKQKI True PC9_epitope_Rep3 1328.80408810512 1328.80298993586 102.79 2 -0.9021164549405262 0.2721879482501706 1.0 ['ENST00000589346.1_1_18:13666456-13666642:-|nuORF'] 39810 7507 HQERRAQPPS True H1975_Epitope_Rep2 1204.6061165745598 1204.60447490379 33.826 3 -0.9021339696959942 0.2721879482501706 1.0 ['ENST00000531791.1_1_11:65146834-65147158:-|nuORF', 'ENST00000533629.5_1_11:65144527-65149406:-|nuORF', 'nc|ENSG00000162241|Q8N413-2|SLC25A45', 'nc|ENSG00000162241|Q8N413-4|SLC25A45', 'ENSG00000162241|ENST00000398802|SLC25A45'] 91177 11004 RLPTPEQI True PC9_epitope_Rep3 952.5341804209199 952.53308993586 47.316 2 -0.902134351523406 0.2721879482501706 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 36177 19729 GVFLLTVP True PC9_epitope_Rep3 844.50584041476 844.50474993586 81.116 2 -0.9021781085481251 0.27219808377896615 1.0 ['GPR141|p.S63G|1|0.29|ENSG00000187037|chr7:37740580-37740580|A/G|missense_variant'] 118280 10403 VDAGTNRAECL True PC9_epitope_Rep1 1147.52917169347 1147.52806993586 44.9 2 -0.9022291978753435 0.272218353989695 1.0 ['nc|ENSG00000116962|P14543-2|NID1', 'ENSG00000116962|ENST00000264187|NID1'] 126184 10349 VPGGAPAPP True PC9_epitope_Rep1 761.40718900265 761.40608993586 44.689 2 -0.9022478652432021 0.272218353989695 1.0 ['ENST00000571503.1_2_17:79632233-79633555:-|nuORF'] 63324 17064 LPDPVLGA True PC9_epitope_Rep1 780.4381547777599 780.43704993586 70.462 2 -0.9023210730027355 0.2722487571888098 1.0 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 63323 11307 LPDPVLGA True NCI_RA007_Epitope_Rep5 780.4381547777599 780.43704993586 50.138 2 -0.902339669182711 0.2722487571888098 1.0 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2'] 81544 7393 PRAPWMEQEGP True H1975_Epitope_Rep1 1296.5921063031997 1296.59100993586 33.441 2 -0.9023471012389439 0.2722487571888098 1.0 ['ENST00000476601.5_1_6:29760033-29760482:+|nuORF', 'ENST00000446817.1_1_6:29760033-29760488:+|nuORF', 'ENST00000457107.5_1_6:29760033-29761240:+|nuORF'] 10161 25650 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 106.76 1 -0.9023564440806707 0.27225889102403433 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 129984 11043 VTPEIPAGLP True PC9_epitope_Rep3 992.5542471591598 992.55314993586 47.47 2 -0.9024026590855257 0.2722829492445868 1.0 ['ENSG00000125657|ENST00000245817|TNFSF9'] 12556 8573 DLDGSGDP True PC9_epitope_Rep2 774.30317742658 774.30208993586 38.337 2 -0.9024185852105429 0.2722892908364315 1.0 ['ENSG00000247746|ENST00000500968|USP51', 'USP51|p.G189Vfs*14|1|0.47|ENSG00000247746|chrX:55488374-55488375|-/A|frameshift_variant'] 24940 15217 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 63.884 2 -0.9024195003873293 0.2722892908364315 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 79195 8172 PGETLGPAAPP True H1975_Epitope_Rep3 1005.5131106231698 1005.51200993586 36.413 2 -0.9024600660828398 0.2722994235428444 1.0 ['ENSG00000226490|ENST00000643770|C8orf90'] 114080 11231 TRRAAAAI True NCI_RA007_Epitope_Rep2 828.4929843152798 828.49188993586 48.271 2 -0.9025013718007588 0.27230576441102755 1.0 ['chr1:1204486-1206385|116|17.83|0.05|8.49|-|0|TNFRSF18,TNFRSF18|1'] 88179 20029 QWTSRKRK True PC9_epitope_Rep6 1088.6203100867199 1088.61920993586 89.708 2 -0.9025046268353658 0.27230576441102755 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 120611 23682 VGAGKRKRRHS True PC9_epitope_Rep5 1250.7432191840599 1250.74212993586 96.072 2 -0.9025146891704681 0.27232981996908984 1.0 ['ENSG00000145220|ENST00000343470|LYAR'] 125178 16509 VLQALPAEP True PC9_epitope_Rep4 936.5280324113198 936.52692993586 71.472 2 -0.9025840546306159 0.2723500828425435 1.0 ['ENST00000483458.1_1_9:131831674-131832729:+|nuORF'] 52165 12387 KLWRPTVGER True H1975_Epitope_Rep1 1240.7040397106798 1240.70294993586 52.679 2 -0.9025964888142162 0.2723500828425435 1.0 ['ENSG00000153292|ENST00000371253|ADGRF1'] 136828 2548 YITWTYFFR True NCI_RA007_Epitope_Rep4 1295.6338944621898 1295.63224490379 14.314 3 -0.9026250981034509 0.27237413677879263 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 14601 4090 DVIIMMLDAT True H1975_Epitope_Rep2 1120.55081865484 1120.5497299358601 20.822 2 -0.9026617732921877 0.27239819004524884 1.0 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000582314.5_1_17:17997264-18003464:+|nuORF'] 128106 21521 VRRRKHPG True PC9_epitope_Rep6 1004.6104141093599 1004.60930993586 95.652 2 -0.902711997808268 0.27240832010692506 1.0 ['ENST00000592087.1_1_19:36980552-36981209:+|nuORF'] 134243 19900 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 83.458 2 -0.9027209036200018 0.2724146572367322 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 78291 7706 PASDPDAPP True H1975_Epitope_Rep3 865.3817621004499 865.3812149679301 34.624 1 -0.9027305691221513 0.2724146572367322 1.0 ['ENSG00000176381|ENST00000322583|PRR18'] 104165 11674 SSASIGDMEKE True PC9_epitope_Rep5 1152.49686850568 1152.4957699358602 49.9 2 -0.9029589544393295 0.27257413337045805 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1-ZNF346|6|fusion', 'NSD1-C11orf58|2|fusion', 'NSD1-ZNF346|5|fusion', 'NSD1-ZNF346|4|fusion', 'NSD1-C11orf58|1|fusion', 'NSD1-ZNF346|8|fusion', 'NSD1-ZNF346|3|fusion', 'NSD1-ZNF346|7|fusion', 'NSD1|p.C2138Sfs*12|1|0.47|ENSG00000165671|chr5:177292108-177292108|G/-|frameshift_variant'] 63710 11804 LPQNDDEL True PC9_epitope_Rep1 942.42944056886 942.42834993586 50.272 2 -0.9029618552852742 0.27257413337045805 1.0 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1'] 24903 17420 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 71.895 2 -0.9030624994201513 0.27260704939027786 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 129484 3568 VTETISET True PC9_epitope_Rep5 878.42329255926 878.42218993586 18.8 2 -0.9030770226971302 0.27260704939027786 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 41596 8558 IDEYHAATQP True H1975_Epitope_Rep2 1143.5196525555898 1143.5185499358602 37.875 2 -0.903110752241086 0.27260704939027786 1.0 ['ENSG00000037042|ENST00000251412|TUBG2'] 20207 9908 ENTLQCPKTPL True NCI_RA007_Epitope_Rep1 1242.6278231055799 1242.62672993586 42.543 2 -0.9031426266606188 0.27260704939027786 1.0 ['ENSG00000196233|ENST00000421806|LCOR'] 43072 7530 IGIFINGK True H1975_Epitope_Rep3 860.51198842436 860.51088993586 33.946 2 -0.9031710205512717 0.27260704939027786 1.0 80613 16754 PLPHIAVL True PC9_epitope_Rep6 858.5327238689399 858.53162993586 76.935 2 -0.9031905590262703 0.27260704939027786 1.0 ['ENSG00000162591|ENST00000356575|MEGF6', 'nc|ENSG00000162591|O75095-2|MEGF6'] 58112 15232 LERWIQDL True PC9_epitope_Rep2 1071.5712942056298 1071.57018993586 63.857 2 -0.9032120379089695 0.27262350533832597 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF', 'ENST00000435868.1_1_22:24056493-24057363:-|nuORF', 'ENST00000451837.5_1_22:24056493-24059477:-|nuORF', 'ENST00000422506.5_1_22:24056493-24059433:-|nuORF', 'ENST00000452737.5_1_22:24056401-24059477:-|nuORF', 'nc|ENSG00000272578|Q6P575|GUSBP11'] 126569 14486 VPPLLAAP True PC9_epitope_Rep2 776.4796256669199 776.47852993586 60.99 2 -0.9032224290061027 0.27262350533832597 1.0 ['nc|ENSG00000183248|Q9H6K5-2|PRR36', 'ENSG00000183248|ENST00000618550|PRR36'] 31380 10034 GEAQLYRQFTT True H1975_Epitope_Rep1 1312.6411646706 1312.64006993586 43.534 2 -0.9032370332852415 0.27262350533832597 1.0 ['ENSG00000166073|ENST00000561100|GPR176', 'nc|ENSG00000166073|Q14439-3|GPR176'] 101446 1037 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 5.7966 2 -0.9032786498421105 0.2726361649708392 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 24870 17835 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 74.629 2 -0.9033087918618916 0.2726361649708392 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 15636 6314 EAWLSSASLQT True H1975_Epitope_Rep2 1191.5771674317098 1191.57606993586 29.222 2 -0.9033157202782126 0.2726361649708392 1.0 ['ENSG00000146830|ENST00000678049|GIGYF1'] 69008 14961 LVHDFVVGQQ True PC9_epitope_Rep1 1140.5927579262 1140.5916699358602 62.369 2 -0.9033515635670657 0.2726361649708392 1.0 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19', 'nc|ENSG00000155229|Q96T76-6|MMS19'] 76508 12020 NTDKDRSL True PC9_epitope_Rep5 947.46722305991 947.46612993586 51.23 2 -0.9033593410425285 0.2726462891821168 1.0 ['ENST00000457179.5_1_22:22317029-22324763:-|nuORF', 'ENST00000444502.5_1_22:22313806-22324763:-|nuORF', 'nc|ENSG00000100038|O95985-3|TOP3B', 'nc|ENSG00000100038|O95985-2|TOP3B', 'ENSG00000100038|ENST00000357179|TOP3B'] 87554 5300 QTLQESEVPVP True H1975_Epitope_Rep3 1225.6190322436898 1225.61792993586 25.465 2 -0.9034590370480985 0.2727044970562445 1.0 ['ENSG00000166261|ENST00000530393|ZNF202'] 74261 19324 NIEIFLLWFWW True PC9_epitope_Rep5 1565.80710779689 1565.8054649037902 79.374 3 -0.9034714492566075 0.2727044970562445 1.0 ['ENST00000502346.1_1_5:82350650-82350776:-|nuORF'] 22359 6780 ETENENEDNE True H1975_Epitope_Rep2 1221.4269339392097 1221.42582993586 30.994 2 -0.9034843931845112 0.2727044970562445 1.0 ['ENSG00000185052|ENST00000328041|SLC24A3'] 98182 9100 SIDNREEL True PC9_epitope_Rep3 974.46688870674 974.46578993586 39.942 2 -0.9035570885558377 0.2727677577376976 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D'] 120731 8533 VGATLKLLKI True NCI_RA007_Epitope_Rep4 1054.7114165069 1054.71030993586 39.615 2 -0.9035908406647031 0.2727677577376976 1.0 ['ENSG00000164219|ENST00000419445|PGGT1B', 'ENST00000398621.3_1_10:81652047-81652404:-|nuORF', 'ENST00000455321.1_1_10:52486845-52487529:-|nuORF'] 69728 8358 LWFHFKRYRY True NCI_RA007_Epitope_Rep2 1514.7935234214199 1514.79187490379 37.151 3 -0.9036068014074506 0.2727677577376976 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 73034 11129 NDFLLVTKT True H1975_Epitope_Rep3 1049.57571087973 1049.57460993586 47.903 2 -0.903661280464231 0.2727677577376976 1.0 ['ENSG00000187510|ENST00000344636|PLEKHG7'] 128653 12724 VSLNEQKPV True PC9_epitope_Rep6 1012.5553097883198 1012.55420993586 60.428 2 -0.9036884140253476 0.2727677577376976 1.0 ['ZNF544|p.L412Tfs*29|1|0.22|ENSG00000198131|chr19:58261839-58261840|-/A|frameshift_variant', 'ENSG00000198131|ENST00000687789|ZNF544'] 136297 7989 YGTPENLASS True H1975_Epitope_Rep3 1037.46655435357 1037.46597496793 35.699 1 -0.9037285996588498 0.2727677577376976 1.0 ['ENSG00000005073|ENST00000006015|HOXA11'] 84991 8655 QIEDPREQWRR True NCI_RA007_Epitope_Rep1 1511.7593227406699 1511.75822993586 37.668 2 -0.9037488837081479 0.2727677577376976 1.0 ['WWC3|p.Q980Rfs*4|1|0.3|ENSG00000047644|chrX:10138788-10138788|G/-|frameshift_variant', 'WWC3|p.Q1028Rfs*19|1|0.56|ENSG00000047644|chrX:10138932-10138932|G/-|frameshift_variant', 'ENSG00000047644|ENST00000380861|WWC3', 'nc|ENSG00000047644|Q9ULE0-2|WWC3'] 24868 17369 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 72.469 2 -0.9037608525637292 0.2727677577376976 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 79063 21330 PFSLKTIE True PC9_epitope_Rep3 933.5171333744499 933.51602993586 87.342 2 -0.9038026740808452 0.2727677577376976 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 84403 8086 QGEVTVASIDD True PC9_epitope_Rep1 1132.52479750568 1132.52370993586 35.927 2 -0.9038287303648033 0.27278293419423066 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 90372 23035 RIKEIQYEIFR True NCI_RA007_Epitope_Rep1 1493.8354478030499 1493.83381490379 94.661 3 -0.9038312743211558 0.27278293419423066 1.0 ['ENSG00000218336|ENST00000511685|TENM3'] 130534 8043 VTWSSLPPDP True H1975_Epitope_Rep1 1097.53932537101 1097.53822993586 35.883 2 -0.9038398892260282 0.27278293419423066 1.0 ['ENSG00000068354|ENST00000376771|TBC1D25'] 3223 6662 AGEYEDSELR True NCI_RA007_Epitope_Rep1 1167.5043964142699 1167.50328993586 29.925 2 -0.9038467987501934 0.27278293419423066 1.0 ['ENST00000560504.1_1_15:65115949-65116540:-|nuORF', 'nc|ENSG00000140451|Q9H611-2|PIF1', 'ENST00000560444.1_1_15:65114569-65116540:-|nuORF', 'ENSG00000140451|ENST00000559239|PIF1', 'nc|ENSG00000140451|Q9H611-3|PIF1'] 66872 8638 LSWGFLINP True NCI_RA007_Epitope_Rep1 1045.55966689277 1045.55856993586 37.602 2 -0.9038646683190568 0.27278293419423066 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0|ABI3BP', 'ABI3BP|p.N183Tfs*2|2|0.2|ENSG00000154175|chr3:100886237-100886237|T/-|frameshift_variant', 'ENST00000475896.5_1_3:100583650-100712249:-|nuORF'] 24959 358 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 2.0417 2 -0.9038742856646181 0.27278293419423066 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 22706 9427 ETVPEETVP True H1975_Epitope_Rep3 999.4760564081099 999.47547496793 41.262 1 -0.9038794904486392 0.27278293419423066 1.0 ['FGD5|p.G502V|1|0.41|ENSG00000154783|chr3:14820576-14820576|G/T|missense_variant'] 24867 17172 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 71.689 2 -0.9039240967060594 0.2727879892582337 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 111501 16292 TLLLWFIWFSN True PC9_epitope_Rep2 1438.76490863174 1438.76380993586 67.913 2 -0.9039496706653863 0.2727879892582337 1.0 ['ENSG00000166111|ENST00000610966|SVOP'] 116446 9754 TWWWRWPRCLR True H1975_Epitope_Rep1 1644.8248406330397 1644.8237499358602 42.449 2 -0.9039901663936437 0.2727879892582337 1.0 ['ENST00000341948.6_1_5:140595634-140595910:+|nuORF'] 83579 10137 QDSPLSQPCSP True H1975_Epitope_Rep3 1157.50228823929 1157.50118993586 44.036 2 -0.9039982814283407 0.2727879892582337 1.0 ['DMD|p.R3489C|1|0.26|ENSG00000198947|chrX:31169531-31169531|G/A|missense_variant'] 20801 4815 EQNQQCLREEQ True H1975_Epitope_Rep3 1403.6099411953098 1403.60884993586 23.647 2 -0.9040086422294502 0.2727879892582337 1.0 ['EVC2|p.H1088N|1|0.58|ENSG00000173040|chr4:5576250-5576250|G/T|missense_variant'] 24987 13010 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 57.143 2 -0.9040224698496361 0.2727879892582337 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 110179 9934 TIDNSKIV True NCI_RA007_Epitope_Rep3 888.4916469026 888.49054993586 46.158 2 -0.9040508778074363 0.2727905164737311 1.0 ['CON__P19001'] 55207 13152 LAPPLPSAS True PC9_epitope_Rep3 851.4752685624701 851.47416993586 55.619 2 -0.9040508839939724 0.2727905164737311 1.0 ['ENSG00000147050|ENST00000611820|KDM6A', 'nc|ENSG00000147050|O15550|KDM6A'] 111023 7241 TLDLQEQL True NCI_RA007_Epitope_Rep4 958.49712620586 958.49602993586 34.487 2 -0.9040553987960699 0.2727905164737311 1.0 ['ENSG00000130307|ENST00000252597|USHBP1'] 82166 9530 PTEDELSLP True H1975_Epitope_Rep3 999.4760564081099 999.47547496793 41.665 1 -0.9041063894382853 0.27280063445243696 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'ENST00000587391.5_1_19:36592854-36593151:+|nuORF'] 15826 15527 EDKKVRVQ True NCI_RA007_Epitope_Rep4 1000.5665431783598 1000.56544993586 67.438 2 -0.9041645173455221 0.2728107521495951 1.0 ['CDK14|p.F103Lfs*39|1|0.23|ENSG00000058091|chr7:90726750-90726750|T/-|frameshift_variant', 'nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14'] 24865 16880 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 70.48 2 -0.9041771251266713 0.2728132782392142 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 34760 8719 GQRPRQGRPAT True NCI_RA007_Epitope_Rep2 1222.6643001570199 1222.66320993586 38.562 2 -0.9041871407418433 0.2728132782392142 1.0 ['ENST00000259089.8_1_8:11400798-11403598:+|nuORF'] 62402 8878 LLRRWWRPICY True H1975_Epitope_Rep3 1560.8499927517198 1560.8488899358601 39.15 2 -0.9042029369785314 0.2728132782392142 1.0 ['ENST00000513185.1_1_5:98109449-98109824:+|nuORF'] 86833 5862 QRPQPLCV True PC9_epitope_Rep6 939.4960210903898 939.49492993586 30.781 2 -0.9042156611534858 0.27283730766020203 1.0 ['ENST00000402198.5_1_3:9519522-9519681:+|nuORF'] 111101 10717 TLEGRSEEL True PC9_epitope_Rep2 1032.50875351872 1032.5076499358602 46.539 2 -0.9042473535001346 0.2728436282693378 1.0 ['ENST00000460788.5_1_2:241655965-241656310:-|nuORF'] 111488 11099 TLLLAQVTP True PC9_epitope_Rep1 954.57498260374 954.57388993586 47.579 2 -0.904248237608373 0.2728436282693378 1.0 ['ENSG00000204548|ENST00000376314|DEFB121'] 105665 10577 SVFTWDLWK True H1975_Epitope_Rep1 1180.59169529704 1180.5905899358602 45.638 2 -0.9044185073827145 0.27289925025385653 1.0 ['ENST00000256257.1_1_8:33405684-33405735:-|nuORF'] 65900 22101 LSLEPWGLP True PC9_epitope_Rep2 1010.5436824754598 1010.5431749679301 90.483 1 -0.9044585899809395 0.27289925025385653 1.0 ['ENST00000461200.5_1_11:2337241-2339151:+|nuORF'] 16525 8485 EEPSAHPV True PC9_epitope_Rep1 864.3977465177599 864.39664993586 37.473 2 -0.9044593883596411 0.27289925025385653 1.0 ['ENST00000564556.1_1_16:2048515-2049688:-|nuORF'] 90147 8601 RHAVPVAL True PC9_epitope_Rep5 861.5184707871299 861.51736993586 38.025 2 -0.9044778831327122 0.27289925025385653 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF', 'ENST00000487121.1_1_2:47136034-47168791:-|nuORF'] 60604 23450 LISLRTFR True PC9_epitope_Rep5 1004.6130994479599 1004.61200993586 95.185 2 -0.9044965447432949 0.27289925025385653 1.0 ['MEI1|p.L870R|1|0.2|ENSG00000167077|chr22:41776166-41776166|T/G|missense_variant'] 136717 11021 YIKRHLYMYV True NCI_RA007_Epitope_Rep1 1384.73256295764 1384.73146993586 46.864 2 -0.9045520234468397 0.27289925025385653 1.0 ['chr4:99005836-99028867|190|13.35|0.83|4.0|+|1|TE_info:L1PB3,L1PB3_dup814,L1,LINE,donor,+,99005121,99005836|None,METAP1|7'] 73302 4036 NEKRKYDEVRK True NCI_RA007_Epitope_Rep2 1463.78447485935 1463.78336993586 20.337 2 -0.9045810720275064 0.27289925025385653 1.0 ['ENST00000514642.1_1_1:43002254-43055163:+|nuORF'] 68162 11332 LTPSPTDSPR True H1975_Epitope_Rep1 1069.54038800017 1069.53987496793 48.567 1 -0.9046052706146741 0.27289925025385653 1.0 ['ENSG00000163508|ENST00000449599|EOMES', 'nc|ENSG00000163508|O95936-3|EOMES', 'nc|ENSG00000163508|O95936-2|EOMES'] 64143 10366 LQEQMRQQL True PC9_epitope_Rep5 1172.59719168364 1172.5960899358602 44.856 2 -0.9046143756704601 0.27289925025385653 1.0 ['ENSG00000135018|ENST00000376395|UBQLN1', 'nc|ENSG00000135018|Q9UMX0-3|UBQLN1'] 10163 25927 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 107.97 1 -0.9046160288959154 0.27289925025385653 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 54797 22657 LAEYLKYRQFP True PC9_epitope_Rep3 1426.7608858804597 1426.75978993586 92.423 2 -0.9046281887434523 0.27289925025385653 1.0 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 56849 8165 LEDFYRFSWED True NCI_RA007_Epitope_Rep2 1505.6463096206896 1505.64520993586 36.396 2 -0.904747944730511 0.2729371835531074 1.0 ['nc|ENSG00000096070|Q9ULD4-3|BRPF3', 'nc|ENSG00000096070|Q9ULD4-2|BRPF3', 'ENSG00000096070|ENST00000357641|BRPF3'] 136045 11637 YFSSHWREKWK True H1975_Epitope_Rep1 1552.75753183552 1552.75642993586 49.752 2 -0.9047938058401274 0.27293970373461296 1.0 ['ENST00000216500.9_1_14:60611635-60611674:-|nuORF'] 6410 17364 APSEVSPPDLW True H1975_Epitope_Rep2 1196.5713537752797 1196.5702499358601 72.084 2 -0.9048012128364763 0.27293970373461296 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A'] 116285 7101 TVVLQAFGK True NCI_RA007_Epitope_Rep4 961.5596668927699 961.55856993586 33.934 2 -0.9048156529511989 0.27293970373461296 1.0 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B', 'ENST00000474416.1_1_22:38622784-38627359:-|nuORF'] 109057 20111 TFCMRYMI True PC9_epitope_Rep2 1063.46531520907 1063.46420993586 82.765 2 -0.9048469025166046 0.272963725381106 1.0 ['ENST00000370440.5_1_1:91404092-91404140:-|nuORF'] 118969 7603 VEEYVYEFRDK True NCI_RA007_Epitope_Rep2 1475.6932598131095 1475.6921699358602 34.197 2 -0.9049151161678846 0.27297004089126264 1.0 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 24993 19500 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 84.271 2 -0.9049434404488952 0.27297004089126264 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 134969 12392 YAFWGAASF True PC9_epitope_Rep3 1018.4548674710599 1018.45376993586 52.695 2 -0.9049507761347289 0.27298263179119214 1.0 ['MS4A10|p.P95A|1|0.28|ENSG00000172689|chr11:60791073-60791073|C/G|missense_variant'] 118795 8150 VEEDGHLKCP True H1975_Epitope_Rep3 1125.51245900017 1125.51136993586 36.327 2 -0.904955852450531 0.27298263179119214 1.0 ['ENSG00000055483|ENST00000449938|USP36', 'USP36|p.K1086Nfs*25|1|0.3|ENSG00000055483|chr17:78798534-78798534|T/-|frameshift_variant'] 11492 21400 DGFFAVKHAR True NCI_RA007_Epitope_Rep5 1146.5934266325396 1146.59179490379 89.377 3 -0.9049584887604 0.27298263179119214 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5'] 25710 18104 FFIISKGTV True PC9_epitope_Rep6 1010.5800679841799 1010.57896993586 82.273 2 -0.9049740443893862 0.27298263179119214 1.0 ['nc|ENSG00000185532|Q13976|PRKG1', 'ENSG00000185532|ENST00000373980|PRKG1', 'ENST00000373975.2_1_10:53806680-53893656:+|nuORF', 'PRKG1|p.K447Ifs*3|1|0.14|ENSG00000185532|chr10:52272415-52272424|GCAAATATTT/-|frameshift_variant'] 114096 16104 TRRPPATA True NCI_RA007_Epitope_Rep3 868.4878989348399 868.48680993586 71.046 2 -0.9049892425036258 0.27298263179119214 1.0 ['CLEC14A|p.K422Nfs*43|1|0.35|ENSG00000176435|chr14:38254757-38254757|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 48827 4767 KERKNRERER True PC9_epitope_Rep2 1399.7756415111496 1399.77400490379 23.706 3 -0.9049914077900088 0.27298263179119214 1.0 ['PPIG-FAM117B|1|fusion', 'nc|ENSG00000138398|Q13427-2|PPIG', 'ENST00000466142.1_1_2:170488267-170492739:+|nuORF', 'PPIG|p.E307V|1|0.19|ENSG00000138398|chr2:169631924-169631924|A/T|missense_variant', 'PPIG|p.A682Gfs*2|1|0.15|ENSG00000138398|chr2:169637293-169637294|-/A|frameshift_variant', 'ENSG00000138398|ENST00000260970|PPIG'] 15750 20623 EDEEDEEDDDV True PC9_epitope_Rep3 1337.42665915569 1337.42500490379 84.596 3 -0.9049997679942237 0.27298263179119214 1.0 ['nc|ENSG00000142655|O75381-2|PEX14', 'ENSG00000142655|ENST00000356607|PEX14'] 128252 6617 VSAAAGDFK True NCI_RA007_Epitope_Rep2 864.43413202648 864.43302993586 30.348 2 -0.9050337096946957 0.27298263179119214 1.0 ['nc|ENSG00000185053|Q96LD1|SGCZ', 'ENSG00000185053|ENST00000382080|SGCZ'] 96531 3299 SELNAGKG True NCI_RA007_Epitope_Rep4 774.3871818340599 774.38608993586 18.406 2 -0.9050391538622838 0.27298263179119214 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 10154 26002 CCCCCGGG True H1975_Epitope_Rep1 704.1208797689599 704.1203249679301 107.93 1 -0.9050597883014309 0.27298263179119214 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 137445 25117 YLNKILLG True NCI_RA007_Epitope_Rep1 932.5695033004799 932.56840993586 103.94 2 -0.9051253685560938 0.27298263179119214 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 36068 15107 GVDYTCEC True PC9_epitope_Rep3 888.29935499944 888.29824993586 63.247 2 -0.9051288246879735 0.27298263179119214 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2', 'NID2|p.A1169Sfs*8|1|0.21|ENSG00000087303|chr14:52011595-52011599|CCAGC/-|frameshift_variant', 'ENST00000554284.1_1_14:52495365-52507549:-|nuORF'] 24985 11631 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 51.692 2 -0.9051632952596899 0.27298263179119214 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 62584 16326 LLVCFWGH True PC9_epitope_Rep4 973.4843937775299 973.48328993586 70.761 2 -0.9051682888697336 0.27298263179119214 1.0 ['ENST00000568717.1_1_16:74334023-74334994:+|nuORF'] 120601 16526 VGAGAYIL True PC9_epitope_Rep2 762.42759009406 762.42648993586 68.807 2 -0.9051697591119857 0.27298263179119214 1.0 ['nc|ENSG00000101079|Q9UGV2-3|NDRG3', 'NDRG3|p.G292Dfs*5|1|0.18|ENSG00000101079|chr20:36656516-36656516|C/-|frameshift_variant', 'nc|ENSG00000101079|Q9UGV2-2|NDRG3', 'ENSG00000101079|ENST00000349004|NDRG3', 'ENST00000366204.6_1_14:21488585-21489215:-|nuORF', 'ENST00000553741.5_1_14:21488585-21492212:-|nuORF', 'nc|ENSG00000165795|Q9UN36-4|NDRG2', 'nc|ENSG00000165795|Q9UN36-2|NDRG2', 'nc|ENSG00000165795|Q9UN36-6|NDRG2', 'ENSG00000165795|ENST00000556147|NDRG2', 'ENST00000554277.5_1_14:21487301-21489989:-|nuORF', 'nc|ENSG00000165795|Q9UN36-5|NDRG2', 'nc|ENSG00000165795|Q9UN36-3|NDRG2'] 92776 17615 RRKQPLHP True NCI_RA007_Epitope_Rep3 1030.6148307834599 1030.6137299358602 77.244 2 -0.9052202633915755 0.27298514934089774 1.0 ['nc|ENSG00000152669|P22674-2|CCNO', 'ENSG00000152669|ENST00000282572|CCNO'] 81348 25377 PPRRGGVLLG True PC9_epitope_Rep3 1020.6192474575597 1020.61867496793 103.03 1 -0.9052402136456597 0.27298514934089774 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 57085 18407 LEELEEWGNPS True PC9_epitope_Rep5 1301.57756135453 1301.5764699358601 75.823 2 -0.905245128736573 0.27298514934089774 1.0 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 97042 10667 SEWQQRERRRY True NCI_RA007_Epitope_Rep1 1592.7920198512797 1592.79092993586 45.481 2 -0.9053354084977066 0.27300157121205804 1.0 ['ENSG00000196812|ENST00000340487|ZSCAN16'] 12527 8623 DLANVTLTY True H1975_Epitope_Rep3 1008.5127762700001 1008.51166993586 38.162 2 -0.9053407363603307 0.27300157121205804 1.0 ['nc|ENSG00000105371|Q14773-2|ICAM4', 'nc|ENSG00000105371|Q14773|ICAM4'] 127736 26018 VRKERKRHKT True NCI_RA007_Epitope_Rep1 1336.81638412432 1336.8152899358602 107.69 2 -0.9053524007329041 0.27300157121205804 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 63034 25739 LNIRVERLTKK True PC9_epitope_Rep4 1368.8565176007999 1368.85542993586 108.43 2 -0.9053685799872591 0.27300660410149463 1.0 ['ENSG00000144224|ENST00000272638|UBXN4'] 20847 17360 EQQKWVSRLVK True NCI_RA007_Epitope_Rep1 1399.79358299107 1399.7924899358602 71.66 2 -0.9053911401510228 0.27300660410149463 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 34547 8679 GQEWTRYQREY True H1975_Epitope_Rep1 1514.6902401213397 1514.68914993586 38.314 2 -0.9054371608864724 0.27300660410149463 1.0 ['ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A'] 11400 3878 DFIYLALRKMR True NCI_RA007_Epitope_Rep2 1424.7962258433597 1424.79457490379 19.72 3 -0.9054443201673024 0.27300660410149463 1.0 ['ENSG00000130159|ENST00000270517|ECSIT', 'nc|ENSG00000130159|Q9BQ95-4|ECSIT', 'nc|ENSG00000130159|Q9BQ95-2|ECSIT'] 55426 7351 LATLLNTEVS True NCI_RA007_Epitope_Rep2 1059.58119018299 1059.58008993586 33.216 2 -0.9054566276375564 0.27300660410149463 1.0 ['nc|ENSG00000158816|Q5TIE3-5|VWA5B1', 'ENSG00000158816|ENST00000289815|VWA5B1', 'nc|ENSG00000158816|Q5TIE3|VWA5B1', 'nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 29649 16235 FVLWERPAL True PC9_epitope_Rep1 1129.6284151589298 1129.62676490379 67.265 3 -0.9054843983174179 0.27300660410149463 1.0 ['ENST00000360900.10_3_16:86564750-86564960:-|nuORF'] 134668 15279 WWNLRRTCFRI True H1975_Epitope_Rep3 1549.8088562157297 1549.80774993586 64.179 2 -0.9055495414851704 0.2730331298919768 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 7791 6908 ASVSHPPP True NCI_RA007_Epitope_Rep4 790.39735259494 790.3962499358599 33.19 2 -0.9055743367873292 0.2730331298919768 1.0 ['ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000470260.1_1_7:99752636-99753198:-|nuORF', 'nc|ENSG00000146826|Q8WVR3-2|TRAPPC14', 'ENST00000448720.5_1_7:99752636-99754020:-|nuORF', 'nc|ENSG00000146826|Q8WVR3-3|TRAPPC14', 'ENST00000394035.6_2_7:99752636-99754020:-|nuORF'] 100744 14325 SLRLHYRMRFY True NCI_RA007_Epitope_Rep1 1540.8085218625602 1540.80742993586 59.76 2 -0.9055751738963541 0.2730331298919768 1.0 ['ENSG00000162434|ENST00000342505|JAK1'] 69078 17491 LVIRNISPI True PC9_epitope_Rep4 1023.6440652230699 1023.6429699358599 75.28 2 -0.9055941574649011 0.2730331298919768 1.0 ['ZNF382|p.E461Kfs*84|1|0.35|ENSG00000161298|chr19:36627274-36627274|G/-|frameshift_variant', 'nc|ENSG00000161298|Q96SR6-3|ZNF382', 'nc|ENSG00000161298|Q96SR6-2|ZNF382', 'ENSG00000161298|ENST00000292928|ZNF382'] 102741 13306 SQDYVLTY True H1975_Epitope_Rep3 987.4549270407099 987.4543749679301 56.439 1 -0.9056381152017955 0.273043236479911 1.0 ['ENSG00000134762|ENST00000360428|DSC3'] 81349 25467 PPRRGGVLLG True PC9_epitope_Rep3 1020.6192474575597 1020.61867496793 103.41 1 -0.9057247140550857 0.2730533427868374 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 90468 25008 RIVIIQIRYRD True PC9_epitope_Rep3 1443.86741663767 1443.86578490379 101.54 3 -0.9057351710383709 0.2730634488127676 1.0 ['LTR13A_dup7|chr1:43138776-43139741:+|1.4968869294777094|0.2457820778445239|2.61|497.0|1|1|sense'] 133752 621 WLLLKLLLLLL True PC9_epitope_Rep3 1349.9414164417299 1349.93977490379 3.4314 3 -0.905811693673382 0.2730735545577134 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 24905 17977 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 74.064 2 -0.9058279767571136 0.27308996886120995 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 80506 21352 PLLLLAAPA True PC9_epitope_Rep4 877.5636896440499 877.56258993586 90.298 2 -0.9058308972066126 0.27308996886120995 1.0 ['ENST00000493548.5_1_6:32122153-32123690:+|nuORF', 'nc|ENSG00000258388|Q9UMR5-2|PPT2', 'ENSG00000221988|ENST00000324816|PPT2', 'nc|ENSG00000258388|Q9UMR5-3|PPT2'] 28115 10668 FRERHHLSRHM True H1975_Epitope_Rep1 1504.7582176252001 1504.7571299358601 45.993 2 -0.9058706075357597 0.27308996886120995 1.0 ['ENSG00000152784|ENST00000415738|PRDM8', 'nc|ENSG00000265763|Q96MN9-2|ZNF488', 'ENSG00000265763|ENST00000585316|ZNF488'] 55798 17270 LDEKHEDVP True PC9_epitope_Rep3 1080.50875351872 1080.5076499358602 71.584 2 -0.9059164627945785 0.27312787578019654 1.0 ['ENSG00000119906|ENST00000238961|SLF2', 'nc|ENSG00000119906|Q8IX21-2|SLF2'] 53716 17603 KYEDLYAFSYN True H1975_Epitope_Rep1 1411.6295969273897 1411.62907496793 73.243 1 -0.9059450751148952 0.2731341831273718 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 91603 19864 RPDLLCQRR True H1975_Epitope_Rep2 1155.6294948714299 1155.62785490379 82.39 3 -0.9059593837019715 0.2731341831273718 1.0 ['ENST00000583283.1_1_17:61904916-61905045:+|nuORF'] 55086 5957 LALLVRKLR True PC9_epitope_Rep5 1080.74953335112 1080.74842993586 27.908 2 -0.9060412292829818 0.2731682906826427 1.0 ['ENSG00000130545|ENST00000600229|CRB3', 'nc|ENSG00000130545|Q9BUF7-2|CRB3'] 131632 6454 VWDRWVFLFHK True NCI_RA007_Epitope_Rep4 1531.8088391323902 1531.8071849037901 31.424 3 -0.9060479153597378 0.2731682906826427 1.0 ['nc|ENSG00000156970|O60566-3|BUB1B'] 10162 26098 CCCCCGGG True H1975_Epitope_Rep3 704.1208797689599 704.1203249679301 108.74 1 -0.9060539465056168 0.2731732399455238 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 104527 6620 SSRRRRSI True NCI_RA007_Epitope_Rep3 1016.5951579680399 1016.59406993586 33.1 2 -0.9060669854390899 0.2731732399455238 1.0 ['nc|ENSG00000156535|Q6YHK3-2|CD109', 'nc|ENSG00000156535|Q6YHK3-4|CD109', 'ENSG00000156535|ENST00000287097|CD109'] 45080 12842 IQRQNEQM True H1975_Epitope_Rep3 1045.4974776423699 1045.4969749679299 54.619 1 -0.9060697256696894 0.2731732399455238 1.0 ['ENSG00000154451|ENST00000370459|GBP5', 'ENST00000481145.1_1_1:89726389-89728307:-|nuORF'] 55089 8749 LALLYGKR True NCI_RA007_Epitope_Rep1 932.58073669052 932.57962993586 38.035 2 -0.9060763332719128 0.2731732399455238 1.0 ['KLC2|p.V290L|1|0.11|ENSG00000174996|chr11:66263878-66263878|G/C|missense_variant'] 21968 9315 ESLPYLPLHLH True H1975_Epitope_Rep1 1317.70812203161 1317.7070299358602 40.737 2 -0.906079655732207 0.2731732399455238 1.0 ['SDR42E1|p.A235Pfs*5|1|0.33|ENSG00000184860|chr16:81999590-81999590|C/-|frameshift_variant', 'ENSG00000184860|ENST00000328945|SDR42E1'] 19930 5380 ELYLNEKKR True NCI_RA007_Epitope_Rep2 1191.6611718391898 1191.65953490379 25.546 3 -0.906083779660948 0.2731732399455238 1.0 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B'] 121639 19164 VGLGALGVI True PC9_epitope_Rep4 797.50108938749 797.5005449679301 81.812 1 -0.9061209629825955 0.2731732399455238 1.0 ['ENST00000427497.3_1_17:17135133-17140372:-|nuORF'] 71784 2606 MNLQNNEAGRR True PC9_epitope_Rep1 1301.6258660429698 1301.62423490379 14.316 3 -0.9061699356330545 0.2731732399455238 1.0 ['ENSG00000111186|ENST00000397196|WNT5B'] 59193 9974 LGFRRAGP True H1975_Epitope_Rep1 872.4980696957198 872.49696993586 43.302 2 -0.9061915919594798 0.2731732399455238 1.0 ['ENST00000346693.8_1_X:149936876-149937104:-|nuORF'] 122544 10734 VGSYSAGF True PC9_epitope_Rep1 786.35481907662 786.35372993586 46.176 2 -0.9062017269790947 0.2731732399455238 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 140076 13801 YVMRKVWLHQ True NCI_RA007_Epitope_Rep2 1358.72814628354 1358.7270499358601 58.331 2 -0.9062860102491513 0.2731732399455238 1.0 ['nc|ENSG00000092020|Q969Q6-2|PPP2R3C', 'ENSG00000092020|ENST00000261475|PPP2R3C'] 24927 27141 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 112.84 2 -0.9062881058209558 0.2731732399455238 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18318 10999 EITYAEVRFK True H1975_Epitope_Rep1 1254.66083748602 1254.6597499358602 47.271 2 -0.9062951647531954 0.2731732399455238 1.0 ['nc|ENSG00000111729|Q9UMR7-4|CLEC4A', 'nc|ENSG00000111729|Q9UMR7-3|CLEC4A', 'nc|ENSG00000111729|Q9UMR7-2|CLEC4A', 'ENSG00000111729|ENST00000229332|CLEC4A'] 17104 8149 EGSCDYRPV True H1975_Epitope_Rep2 1024.42839502304 1024.42728993586 36.295 2 -0.9063063899295881 0.2731732399455238 1.0 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'ENSG00000131653|ENST00000326181|TRAF7'] 25050 6056 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 31.667 2 -0.9063382013592105 0.2731732399455238 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 62467 21505 LLSMFKYN True PC9_epitope_Rep6 1014.5208388559 1014.51974993586 95.592 2 -0.9063471489597469 0.2731732399455238 1.0 ['TARS1|p.A228S|1|0.36|ENSG00000113407|chr5:33455693-33455693|G/T|missense_variant'] 3044 12141 AFVQEIGSL True PC9_epitope_Rep2 962.5072969667399 962.50618993586 52.011 2 -0.9063499731074414 0.2731732399455238 1.0 ['ENSG00000171823|ENST00000339235|FBXL14'] 24926 27026 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 112.16 2 -0.9064304212270897 0.273207337409672 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 127175 17158 VQEYYKIFMEK True NCI_RA007_Epitope_Rep1 1476.7322881741195 1476.7311899358601 70.874 2 -0.9064329345122373 0.273207337409672 1.0 ['INPP4B|p.L777V|2|0.12|ENSG00000109452|chr4:142108138-142108138|G/C|missense_variant'] 125910 1537 VNVKREYDHM True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 8.5094 3 -0.9064884473592145 0.27324143297851644 1.0 ['nc|ENSG00000151702|Q01543-3|FLI1', 'ENSG00000151702|ENST00000527786|FLI1', 'ENST00000608055.1_1_11:128628003-128638319:+|nuORF'] 62702 21286 LLWWCFFLMYL True H1975_Epitope_Rep1 1533.7552725481698 1533.75416993586 88.429 2 -0.9065050525239359 0.27324143297851644 1.0 ['ENST00000505189.5_3_4:159133255-159133342:+|nuORF'] 109099 8879 TFFTSTWEV True PC9_epitope_Rep6 1116.51277627 1116.51166993586 44.096 2 -0.9065146625754372 0.2732477349786004 1.0 ['ENSG00000171495|ENST00000399564|MROH2B', 'nc|ENSG00000171495|Q7Z745-2|MROH2B'] 93533 19119 RSPRGILG True NCI_RA007_Epitope_Rep2 854.5086343794198 854.50752993586 79.23 2 -0.906526828844585 0.2732477349786004 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 85022 5637 QIGEKMPV True H1975_Epitope_Rep2 900.4738886634799 900.47278993586 26.682 2 -0.9065920767163772 0.27328812805691416 1.0 ['nc|ENSG00000088970|Q2M2Z5-2|KIZ', 'nc|ENSG00000088970|Q2M2Z5-3|KIZ', 'nc|ENSG00000088970|Q2M2Z5-4|KIZ', 'ENSG00000088970|ENST00000619189|KIZ', 'nc|ENSG00000088970|Q2M2Z5-5|KIZ'] 4916 15857 ALGSHDLQVT True PC9_epitope_Rep2 1039.52982331647 1039.5287299358602 66.252 2 -0.9066109211896125 0.27328812805691416 1.0 ['ENST00000489298.1_1_X:55187350-55187527:-|nuORF'] 120038 12220 VFEHDAWFIF True NCI_RA007_Epitope_Rep4 1309.6131590176099 1309.61206993586 53.998 2 -0.9066605987478064 0.27328812805691416 1.0 ['nc|ENSG00000112759|Q99808-2|SLC29A1', 'ENSG00000112759|ENST00000371755|SLC29A1'] 81352 25425 PPRRGGVLLG True PC9_epitope_Rep5 1020.6192474575597 1020.61867496793 103.03 1 -0.9066625921472466 0.27328812805691416 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 121946 10839 VGPRKPFFER True NCI_RA007_Epitope_Rep4 1231.6825759901096 1231.68094490379 48.543 3 -0.906697109288635 0.2733045254338553 1.0 ['ENSG00000251692|ENST00000447419|PTX4'] 112095 17605 TLTQFHFL True PC9_epitope_Rep1 1005.52836676449 1005.52726993586 72.51 2 -0.9067187659846131 0.2733045254338553 1.0 ['nc|ENSG00000054356|Q16849-3|PTPRN', 'nc|ENSG00000054356|Q16849-2|PTPRN', 'ENSG00000054356|ENST00000295718|PTPRN', 'ENST00000462351.5_1_2:220154950-220159983:-|nuORF'] 99448 17429 SLEKHPEVP True PC9_epitope_Rep6 1034.53965972418 1034.53856993586 79.655 2 -0.9067243782061064 0.2733045254338553 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 111403 22359 TLKEVEEL True PC9_epitope_Rep5 959.5175272972699 959.51642993586 91.013 2 -0.9069238240760771 0.27338029538854847 1.0 ['ENSG00000159840|ENST00000322764|ZYX', 'nc|ENSG00000159840|Q15942-2|ZYX'] 73731 12615 NGYMWRYRHRY True PC9_epitope_Rep3 1600.74698423516 1600.74532490379 53.547 3 -0.9069498119466004 0.27338029538854847 1.0 ['ENST00000437043.7_1_5:96253823-96253934:+|nuORF'] 799 7355 ACLGAGEY True H1975_Epitope_Rep2 782.32689007662 782.32634496793 33.231 1 -0.9069838551270802 0.2734042848806513 1.0 ['ENST00000375128.4_1_9:100456034-100459626:-|nuORF'] 131355 10568 VVSASEYQILQ True H1975_Epitope_Rep2 1235.63976768827 1235.6386699358602 45.671 2 -0.9070099636000454 0.2734105813048794 1.0 ['ENST00000478946.1_1_2:74071889-74072120:+|nuORF'] 118070 9501 VATTLQYV True PC9_epitope_Rep5 893.48583324617 893.48472993586 41.502 2 -0.9070334074852114 0.2734105813048794 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 81353 25508 PPRRGGVLLG True PC9_epitope_Rep5 1020.6192474575597 1020.61867496793 103.37 1 -0.9070960925135753 0.2734484627033636 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 90214 18914 RHKRRRRKH True NCI_RA007_Epitope_Rep3 1328.8238695465998 1328.8227699358602 82.686 2 -0.9071260308618418 0.2734547576376443 1.0 ['DVL3|p.Q224H|1|0.1|ENSG00000161202|chr3:184165185-184165185|G/C|missense_variant'] 127298 7762 VQLPAKQP True NCI_RA007_Epitope_Rep1 879.51780208079 879.51670993586 34.184 2 -0.9071563762520356 0.2734547576376443 1.0 ['nc|ENSG00000168004|Q96KN8-2|PLAAT5', 'nc|ENSG00000168004|Q96KN8|PLAAT5', 'ENSG00000168004|ENST00000540857|PLAAT5'] 44053 22441 ILLFRRPLPK True PC9_epitope_Rep4 1251.8179472641098 1251.81631490379 94.552 3 -0.9072276455767428 0.2734787440955821 1.0 ['ENSG00000123975|ENST00000314355|CKS2', 'ENST00000477676.6_1_1:154947554-154951250:+|nuORF', 'ENSG00000173207|ENST00000308987|CKS1B'] 25004 14483 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 62.388 2 -0.9072642351108755 0.27350272988705354 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 68170 12516 LTPWQKRQAV True PC9_epitope_Rep4 1225.69314067381 1225.69150490379 55.963 3 -0.9072967655337659 0.2735645916396927 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 98883 15468 SIVYACNK True H1975_Epitope_Rep1 896.4425885352 896.44203496793 64.77 1 -0.9073174923998247 0.2735645916396927 1.0 ['CON__Q28065'] 242 10389 AAGDKWKPP True H1975_Epitope_Rep3 968.5079656730799 968.50686993586 45.018 2 -0.9073446680608048 0.273580974078293 1.0 ['nc|ENSG00000179950|Q9UHX1-2|PUF60', 'ENSG00000179950|ENST00000526683|PUF60', 'ENST00000532127.5_1_8:144902796-144911473:-|nuORF', 'ENST00000526151.5_1_8:144903610-144911473:-|nuORF'] 47958 20567 KAASLLSP True PC9_epitope_Rep5 785.46470387877 785.46360993586 84.157 2 -0.9073703857329741 0.273580974078293 1.0 ['ENST00000378103.7_3_9:35748784-35748955:-|nuORF'] 76676 10890 NTLERREKHEK True H1975_Epitope_Rep1 1438.7640737679396 1438.7629699358602 46.85 2 -0.9074155008458922 0.273580974078293 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 122106 14114 VGRFTEEIEWL True PC9_epitope_Rep4 1377.6928658902898 1377.69121490379 62.195 3 -0.907435483404435 0.2736049564504702 1.0 ['ENST00000510450.1_1_3:125688183-125696014:+|nuORF', 'ENSG00000114547|ENST00000514116|ROPN1B', 'ENSG00000065371|ENST00000405845|ROPN1', 'ENST00000487124.1_1_3:123694216-123694345:-|nuORF', 'nc|ENSG00000114547|Q9BZX4-2|ROPN1B'] 123766 8769 VISHKEEVP True H1975_Epitope_Rep1 1036.5553097883198 1036.5542099358602 38.66 2 -0.9075030690950673 0.2736529191959883 1.0 ['ENSG00000172497|ENST00000307624|ACOT12'] 116554 12997 TYFFKRTQYFR True H1975_Epitope_Rep1 1555.79358299107 1555.7924899358602 55.073 2 -0.9075360004993572 0.2736529191959883 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'nc|ENSG00000183605|Q6P4A7-3|SFXN4'] 81354 25591 PPRRGGVLLG True PC9_epitope_Rep5 1020.6192474575597 1020.61867496793 103.75 1 -0.9075805929230017 0.2736768995693846 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 110553 12795 TIRSSSISYSQ True H1975_Epitope_Rep1 1227.60953018915 1227.6084299358602 54.279 2 -0.9076153332764791 0.2737147699017933 1.0 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A', 'nc|ENSG00000034677|Q9NV58-2|RNF19A', 'ENST00000524233.1_1_8:101280952-101287235:-|nuORF'] 11123 6757 DEEERRRRVFD True H1975_Epitope_Rep1 1505.73350191565 1505.73184490379 31.03 3 -0.907703414385924 0.2737172542156291 1.0 ['ENSG00000110429|ENST00000265651|FBXO3'] 25029 4990 FDDGDCCD True PC9_epitope_Rep4 888.226583982 888.22548993586 25.807 2 -0.9077509403552313 0.2737172542156291 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 13915 21649 DREELNYWI True PC9_epitope_Rep3 1236.5775017848798 1236.57640993586 88.573 2 -0.9077587024857577 0.2737172542156291 1.0 ['nc|ENSG00000079102|Q06455-6|RUNX1T1', 'nc|ENSG00000079102|Q06455-5|RUNX1T1', 'nc|ENSG00000079102|Q06455-4|RUNX1T1', 'nc|ENSG00000079102|Q06455-2|RUNX1T1', 'nc|ENSG00000079102|Q06455|RUNX1T1', 'nc|ENSG00000079102|Q06455-3|RUNX1T1', 'ENSG00000079102|ENST00000436581|RUNX1T1'] 106051 14708 SVLSCVRSL True PC9_epitope_Rep1 962.52190148506 962.52080993586 61.394 2 -0.9078480706914364 0.27372734217654004 1.0 ['ENSG00000197993|ENST00000355265|KEL'] 9105 9222 AVLESRTLY True H1975_Epitope_Rep2 1050.57095985246 1050.5698699358602 40.426 2 -0.9078741237924774 0.2737374298572143 1.0 ['ENSG00000141434|ENST00000269202|MEP1B'] 107673 17631 TAITATNPI True PC9_epitope_Rep4 900.4916469026 900.49054993586 75.838 2 -0.9078829344581604 0.2737475172576635 1.0 ['nc|ENSG00000114120|Q96CQ1-3|SLC25A36', 'ENSG00000114120|ENST00000324194|SLC25A36'] 57344 5244 LEGVPPSK True NCI_RA007_Epitope_Rep2 825.4596184983301 825.45852993586 25.02 2 -0.9079294717533178 0.27378538292730353 1.0 ['ENSG00000110987|ENST00000261822|BCL7A', 'nc|ENSG00000110987|Q4VC05-2|BCL7A'] 5708 7513 APARLPAAPA True PC9_epitope_Rep3 933.5396001545298 933.53850993586 33.901 2 -0.9079372717291762 0.27379546938151916 1.0 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 117942 5361 VARGLLANP True NCI_RA007_Epitope_Rep5 909.5396001545299 909.53850993586 27.311 2 -0.9079809395677434 0.27381564144942433 1.0 ['ENSG00000105865|ENST00000265720|DUS4L', 'nc|ENSG00000288558|O95620-2|DUS4L', 'ENST00000485825.1_1_7:107215546-107218002:+|nuORF'] 134666 15280 WWNLRRTCFRI True H1975_Epitope_Rep1 1549.8088562157297 1549.80774993586 64.041 2 -0.9079909049660331 0.27381564144942433 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 115080 23700 TTTKTLELLLS True NCI_RA007_Epitope_Rep4 1218.7071189721 1218.7060299358602 102.78 2 -0.9080143109984266 0.2738219240864964 1.0 ['ENST00000230914.4_1_5:44820328-44820394:+|nuORF'] 128966 21073 VSVQLLLV True PC9_epitope_Rep6 869.5586042636099 869.55750993586 93.881 2 -0.9080459336015132 0.2738219240864964 1.0 ['ENSG00000183303|ENST00000329434|OR5P2'] 45931 5619 ISRYQFSFLTL True PC9_epitope_Rep6 1373.73433677945 1373.73268490379 29.689 3 -0.9081039114515679 0.2738597855674685 1.0 ['ENSG00000182747|ENST00000331858|SLC35D3'] 125345 15641 VLSKHLAI True PC9_epitope_Rep6 879.55418758951 879.55308993586 72.368 2 -0.9081662274872594 0.2738837580723561 1.0 ['nc|ENSG00000293412|O75343|GUCY1B2', 'ENST00000389600.6_1_13:51590304-51594849:-|nuORF'] 65348 6244 LSENGKHVK True NCI_RA007_Epitope_Rep2 1010.5508931142201 1010.54978993586 28.893 2 -0.9081807916742138 0.27389003846848226 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 44935 9313 IQELKFDEK True NCI_RA007_Epitope_Rep1 1148.607739284 1148.60664993586 40.22 2 -0.9081976243934908 0.27389003846848226 1.0 ['nc|ENSG00000119946|Q9NRU3-2|CNNM1', 'ENSG00000119946|ENST00000356713|CNNM1'] 93502 9792 RSKTDLDCIF True PC9_epitope_Rep4 1196.5859582935998 1196.58430490379 45.306 3 -0.9082192432343076 0.27391400955449396 1.0 ['ENSG00000254093|ENST00000314787|PINX1', 'ENST00000524061.1_1_8:10645233-10677771:-|nuORF'] 14209 16803 DSTVLCPLRGR True H1975_Epitope_Rep3 1215.6393908487898 1215.63828993586 70.185 2 -0.9083023988714198 0.27395186712772013 1.0 ['ENST00000560365.5_1_14:24631516-24632718:+|nuORF', 'ENST00000559284.5_1_14:24631519-24633284:+|nuORF'] 126314 14616 VPIWWFWKLRH True NCI_RA007_Epitope_Rep2 1566.86120905842 1566.86010993586 61.519 2 -0.90835224562302 0.2739758366893487 1.0 ['ENST00000460045.1_1_7:128034815-128035199:-|nuORF'] 99491 7812 SLEQVDILWHC True NCI_RA007_Epitope_Rep1 1341.63872214245 1341.63762993586 34.378 2 -0.908374134269036 0.2739807820484337 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 85650 11521 QLQGNVLL True PC9_epitope_Rep4 883.5127167003499 883.51160993586 52.078 2 -0.9083768225982597 0.2739807820484337 1.0 ['ENST00000522601.5_1_8:8086126-8093767:+|nuORF'] 79530 6673 PGRTSDSPW True PC9_epitope_Rep2 1001.4566583762099 1001.45556993586 31.073 2 -0.9083831273408145 0.2739807820484337 1.0 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant', 'ENST00000522327.1_1_8:103372297-103373424:-|nuORF'] 107392 5175 SYSSTFHSLEE True NCI_RA007_Epitope_Rep5 1285.5462612262502 1285.54516993586 26.599 2 -0.9083889928768963 0.2739807820484337 1.0 ['ENSG00000162825|ENST00000698833|NBPF20', 'nc|ENSG00000273136|B4DH59|NBPF26', 'nc|ENSG00000270629|Q5TI25|NBPF14', 'nc|ENSG00000269713|P0DPF3-2|NBPF9', 'ENSG00000269713|ENST00000698832|NBPF9', 'ENSG00000270629|ENST00000619423|NBPF14', 'ENSG00000271425|ENST00000583866|NBPF10', 'ENSG00000271383|ENST00000651566|NBPF19', 'ENSG00000266338|ENST00000581897|NBPF15', 'nc|ENSG00000270231|Q3BBV2|NBPF8', 'ENSG00000263956|ENST00000682118|NBPF11', 'ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF', 'ENSG00000273136|ENST00000620612|NBPF26', 'NBPF26|p.E1115Kfs*41|1|0.13|ENSG00000273136|chr1:120832952-120832952|G/-|frameshift_variant'] 82089 13685 PSYRRWIWQHL True NCI_RA007_Epitope_Rep1 1540.8051507342798 1540.8040499358601 57.244 2 -0.9083963717045206 0.2739807820484337 1.0 ['EPB41L1-C20orf152|8|fusion', 'EPB41L1-C20orf152|2|fusion', 'EPB41L1-C20orf152|10|fusion', 'EPB41L1-C20orf152|7|fusion', 'EPB41L1-C20orf152|1|fusion', 'EPB41L1-C20orf152|12|fusion', 'EPB41L1-C20orf152|6|fusion', 'EPB41L1-C20orf152|4|fusion', 'EPB41L1-C20orf152|9|fusion', 'EPB41L1-C20orf152|11|fusion', 'EPB41L1-C20orf152|5|fusion', 'EPB41L1-C20orf152|3|fusion', 'nc|ENSG00000149646|Q96M20-3|CNBD2', 'nc|ENSG00000149646|Q96M20-2|CNBD2', 'ENSG00000149646|ENST00000373973|CNBD2'] 94579 23959 RYIRLRFQRIR True PC9_epitope_Rep5 1575.9586316839097 1575.95698490379 97.14 3 -0.9084040408640982 0.2739807820484337 1.0 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.V2037Lfs*29|1|0.2|ENSG00000196569|chr6:129440839-129440839|G/-|frameshift_variant', 'LAMA2|p.R1029Hfs*46|1|0.17|ENSG00000196569|chr6:129300784-129300784|G/-|frameshift_variant', 'LAMA2|p.V425Sfs*27|1|0.09|ENSG00000196569|chr6:129165640-129165640|A/-|frameshift_variant', 'LAMA2|p.E614Gfs*16|1|0.25|ENSG00000196569|chr6:129250170-129250171|AA/-|frameshift_variant'] 85599 21089 QLLYVYHL True PC9_epitope_Rep5 1047.57531695691 1047.5742099358602 86.181 2 -0.9084969388780607 0.2740072202166065 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion'] 76405 21970 NSNFLEHRRV True H1975_Epitope_Rep1 1270.65306676698 1270.65196993586 91.386 2 -0.9085208986345413 0.2740072202166065 1.0 ['ENSG00000174586|ENST00000311044|ZNF497'] 74807 11431 NLPAPDQPQPP True H1975_Epitope_Rep1 1172.5825871653199 1172.5814899358602 48.95 2 -0.9085354217077862 0.2740072202166065 1.0 ['ENSG00000124302|ENST00000650847|CHST8'] 117699 12528 VALAIGCVRNL True PC9_epitope_Rep6 1127.64849898051 1127.6474099358602 59.622 2 -0.9085392543783005 0.2740072202166065 1.0 ['nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'ENSG00000114374|ENST00000338981|USP9Y'] 47354 14765 IYHREEKRWRW True H1975_Epitope_Rep1 1657.8589772122898 1657.8578899358602 62.018 2 -0.908624987173543 0.2740450701878619 1.0 ['nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 10497 4206 CNLFCFWSKKY True NCI_RA007_Epitope_Rep1 1437.6573494120498 1437.65569490379 20.461 3 -0.9086477344419867 0.2740551498153342 1.0 ['ENSG00000148942|ENST00000396005|SLC5A12'] 99361 8590 SLDTYLKK True H1975_Epitope_Rep3 966.5385970950199 966.53750993586 38.032 2 -0.908715468670095 0.2740791136164836 1.0 ['ENSG00000096968|ENST00000381652|JAK2'] 34916 6923 GQVYTTKHIVR True NCI_RA007_Epitope_Rep5 1300.72516907808 1300.7235149037901 33.314 3 -0.9087419846620041 0.27409927108642834 1.0 ['ZSWIM2|p.P319T|1|0.41|ENSG00000163012|chr2:186829867-186829867|G/T|missense_variant'] 125073 24471 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 105.89 3 -0.9087422252019902 0.27409927108642834 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 24907 18569 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 76.369 2 -0.9087668542406072 0.274109349401605 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 131408 1409 VVTKEKLLLE True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 7.4604 3 -0.9088334569594314 0.27411942743693335 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 77702 7791 PAAEEAGRWRR True H1975_Epitope_Rep1 1297.6639658038498 1297.66286993586 34.924 2 -0.9088902099007549 0.27417115566168715 1.0 ['ENST00000333942.10_1_17:30469548-30498062:+|nuORF'] 135379 16173 YDIWHRRHDYW True NCI_RA007_Epitope_Rep2 1645.75384343741 1645.75274993586 67.637 2 -0.9089278424916597 0.27418123255910815 1.0 ['ENSG00000116254|ENST00000262450|CHD5'] 67724 12831 LTGIWQMRHLK True H1975_Epitope_Rep3 1381.7652600682502 1381.76416993586 54.574 2 -0.908995110364585 0.27423295848951823 1.0 ['nc|ENSG00000158604|Q7Z7H5-2|TMED4', 'ENSG00000158604|ENST00000457408|TMED4'] 113372 13713 TQLFRLSRDRK True NCI_RA007_Epitope_Rep2 1418.81063003754 1418.8095299358602 57.985 2 -0.9090996736229477 0.27426564495530015 1.0 ['HRH3|p.R347L|1|0.34|ENSG00000101180|chr20:62216304-62216304|C/A|missense_variant'] 87743 16764 QVFINRFRYN True NCI_RA007_Epitope_Rep4 1355.7098533671096 1355.70820490379 72.665 3 -0.9091103874318345 0.27426564495530015 1.0 ['ABCF3|p.D442N|1|0.33|ENSG00000161204|chr3:184189864-184189864|G/A|missense_variant'] 24983 6785 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 32.718 2 -0.9091343136655532 0.27426564495530015 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 78869 20483 PESSLALRLV True PC9_epitope_Rep5 1083.62880908175 1083.6277099358601 83.827 2 -0.9091549063246311 0.27426564495530015 1.0 ['nc|ENSG00000187908|Q9UGM3-4|DMBT1', 'nc|ENSG00000187908|Q9UGM3-8|DMBT1', 'nc|ENSG00000187908|Q9UGM3-2|DMBT1', 'nc|ENSG00000187908|Q9UGM3-5|DMBT1', 'nc|ENSG00000187908|Q9UGM3-3|DMBT1', 'nc|ENSG00000187908|Q9UGM3|DMBT1', 'nc|ENSG00000187908|Q9UGM3-7|DMBT1', 'ENSG00000187908|ENST00000338354|DMBT1'] 111152 14267 TLESDYWPP True PC9_epitope_Rep1 1106.49204082542 1106.49094993586 59.701 2 -0.9091605604761367 0.27426564495530015 1.0 ['ENST00000550079.1_1_12:50524330-50528523:-|nuORF'] 56462 6705 LDSVPRINP True NCI_RA007_Epitope_Rep1 1009.5556441414899 1009.55454993586 30.091 2 -0.9091659214940478 0.27426564495530015 1.0 ['ENST00000551270.1_1_12:104283206-104309165:-|nuORF'] 124913 15627 VLLSENQLAP True PC9_epitope_Rep2 1082.5971746003 1082.5960699358602 65.386 2 -0.909188664400485 0.2742896011771728 1.0 ['VNN1|p.L460Cfs*4|1|0.5|ENSG00000112299|chr6:132683303-132683303|A/-|frameshift_variant', 'ENSG00000112299|ENST00000367928|VNN1'] 139196 6649 YSTGTGWI True PC9_epitope_Rep4 883.4075829254699 883.40648993586 32.744 2 -0.9092632013363517 0.2743083991505073 1.0 ['ENSG00000164411|ENST00000525899|GJB7'] 85903 11255 QNQEQQYPD True H1975_Epitope_Rep2 1148.47343063916 1148.4723299358602 48.337 2 -0.9092665140903855 0.2743083991505073 1.0 ['ENSG00000164256|ENST00000296682|PRDM9'] 79130 13399 PGAKKSAK True PC9_epitope_Rep1 785.4759372688098 785.47484993586 56.402 2 -0.909280506351136 0.2743083991505073 1.0 ['nc|ENSG00000163606|Q8TD46-1|CD200R1', 'ENSG00000163606|ENST00000308611|CD200R1'] 24924 23824 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 98.512 2 -0.9092867751431445 0.2743083991505073 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 61487 22408 LLFMKLRWFLK True PC9_epitope_Rep2 1493.8944833326498 1493.8933899358601 91.686 2 -0.9093146290093957 0.2743083991505073 1.0 ['nc|ENSG00000149639|O94964-1|MTCL2', 'ENSG00000149639|ENST00000237536|SOGA1', 'nc|ENSG00000149639|O94964-4|MTCL2'] 48052 11841 KALQNQPSL True PC9_epitope_Rep5 997.5556441414899 997.55454993586 50.546 2 -0.909315944423482 0.2743083991505073 1.0 ['CNTN5|p.Q506Kfs*23|1|0.24|ENSG00000149972|chr11:100074227-100074227|C/-|frameshift_variant'] 1780 4995 AEHQRVHPG True H1975_Epitope_Rep2 1029.51042528457 1029.50932993586 24.298 2 -0.909316229010134 0.2743184720448615 1.0 ['ZNF320|p.T380P|1|0.4|ENSG00000182986|chr19:52880988-52880988|T/G|missense_variant'] 14756 15266 DVWPEHSI True PC9_epitope_Rep1 981.45559574705 981.45448993586 63.541 2 -0.9093845751113635 0.2743701853008536 1.0 ['nc|ENSG00000146757|Q03936-2|ZNF92', 'nc|ENSG00000146757|Q03936-3|ZNF92', 'ENSG00000146757|ENST00000328747|ZNF92'] 56818 8956 LECGHMVT True PC9_epitope_Rep4 888.38335940692 888.38226993586 41.995 2 -0.9094424162902344 0.2743903285355393 1.0 ['nc|ENSG00000092871|Q8WZ73-3|RFFL', 'nc|ENSG00000092871|Q8WZ73-2|RFFL', 'ENSG00000092871|ENST00000394597|RFFL', 'ENSG00000170633|ENST00000361234|RNF34', 'nc|ENSG00000170633|Q969K3-2|RNF34'] 36706 10296 GVMRMKWWLF True NCI_RA007_Epitope_Rep3 1352.6885899706797 1352.6874899358602 47.57 2 -0.9094583905483445 0.2743903285355393 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF'] 7712 5805 ASQTSSSPAPK True NCI_RA007_Epitope_Rep2 1059.51965255559 1059.5185499358602 27.198 2 -0.9095602143168349 0.27441427936930934 1.0 ['nc|ENSG00000112576|P30281-3|CCND3', 'ENSG00000112576|ENST00000372991|CCND3', 'nc|ENSG00000112576|P30281-2|CCND3', 'FOXP4-CCND3|5|fusion', 'FOXP4-CCND3|1|fusion', 'FOXP4-CCND3|3|fusion', 'FOXP4-CCND3|2|fusion', 'FOXP4-CCND3|4|fusion', 'nc|ENSG00000112576|P30281-4|CCND3'] 69559 10352 LVTGIQLNP True H1975_Epitope_Rep3 953.55458151233 953.55348993586 44.873 2 -0.9095668131580501 0.2744243500950742 1.0 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000475596.1_1_2:190306218-190316629:+|nuORF', 'ENST00000472286.5_1_2:190306218-190320233:+|nuORF'] 79676 6963 PHKRSHRHRGK True H1975_Epitope_Rep3 1394.78681533154 1394.78515490379 31.744 3 -0.9095830079808425 0.27443442054129075 1.0 ['ENSG00000140986|ENST00000268661|RPL3L'] 119484 5737 VEQFTQQD True H1975_Epitope_Rep3 993.4403396057298 993.43924993586 27.097 2 -0.9095898998705438 0.2744444907079707 1.0 ['ENSG00000173546|ENST00000308508|CSPG4'] 100157 12115 SLLEERRTPP True H1975_Epitope_Rep3 1196.65133543148 1196.6502299358601 51.765 2 -0.9097063042242594 0.27451007605618166 1.0 ['nc|ENSG00000086015|Q6P0Q8-2|MAST2', 'ENSG00000086015|ENST00000361297|MAST2'] 18631 10556 ELAMFVQLL True PC9_epitope_Rep3 1062.5783537320199 1062.5772499358602 45.551 2 -0.9097257678909889 0.27453402356598616 1.0 ['nc|ENSG00000124091|Q6ZNI0|GCNT7'] 119337 11549 VEMEDFDANI True PC9_epitope_Rep5 1181.4910548492498 1181.48941490379 49.42 3 -0.9098014889599536 0.2745680383040733 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 41766 9811 IDQEWKMVLLS True PC9_epitope_Rep1 1360.70607342628 1360.7044349037901 42.6 3 -0.9098021058426882 0.2745680383040733 1.0 ['FAM135B|p.G626W|1|0.22|ENSG00000147724|chr8:138152599-138152599|C/A|missense_variant'] 112391 15358 TNEISNMQK True PC9_epitope_Rep1 1063.4968089360298 1063.49570993586 63.892 2 -0.9099204628087048 0.2745881732517313 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 31394 7073 GEAVSWRPP True NCI_RA007_Epitope_Rep1 997.4981292653699 997.49702993586 31.506 2 -0.9099549601005857 0.2745881732517313 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4'] 122891 2778 VGVRDYRYTF True NCI_RA007_Epitope_Rep1 1274.64077074778 1274.6391149037902 14.696 3 -0.9099729113842738 0.27461211801604263 1.0 ['STAB2|p.C71Y|1|0.26|ENSG00000136011|chr12:103591027-103591027|G/A|missense_variant'] 55060 13231 LALGLRGWLR True H1975_Epitope_Rep1 1153.7083968151298 1153.7072899358602 55.99 2 -0.910018431208222 0.2746221845987316 1.0 ['ENST00000549336.5_1_12:48237795-48237879:-|nuORF'] 91171 10936 RLPTPEQI True PC9_epitope_Rep1 952.5341804209199 952.53308993586 46.953 2 -0.9100844431202308 0.2746284397940634 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 136859 16646 YIWFIIFFIQP True PC9_epitope_Rep1 1485.8060451677297 1485.80440490379 68.857 3 -0.9100861273748208 0.2746284397940634 1.0 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9'] 120340 10851 VFPGLQGG True NCI_RA007_Epitope_Rep4 773.4071890026498 773.40608993586 48.588 2 -0.910103545331621 0.2746295165676861 1.0 ['ENSG00000176974|ENST00000316694|SHMT1', 'nc|ENSG00000176974|P34896-4|SHMT1'] 114081 12760 TRRAAAAI True NCI_RA007_Epitope_Rep2 828.4929843152798 828.49188993586 54.252 2 -0.9101271532449133 0.2746295165676861 1.0 ['chr1:1204486-1206385|116|17.83|0.05|8.49|-|0|TNFRSF18,TNFRSF18|1'] 22826 9770 EVEEDEYKAFY True PC9_epitope_Rep1 1420.6034417491996 1420.60234993586 42.441 2 -0.9101370304336408 0.2746295165676861 1.0 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000550479.1_1_12:104332030-104335334:+|nuORF'] 9309 12439 AVSDRVTVL True PC9_epitope_Rep4 958.5447451046199 958.54364993586 55.653 2 -0.9101875296720469 0.2746295165676861 1.0 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 43591 12937 IIGHSSGAI True PC9_epitope_Rep4 853.46576650793 853.46466993586 57.647 2 -0.91019101069507 0.2746295165676861 1.0 ['ENST00000493184.5_1_20:18470561-18477746:-|nuORF', 'nc|ENSG00000089050|O75884-2|RBBP9', 'ENSG00000089050|ENST00000337227|RBBP9'] 12271 10237 DISDSKIRY True H1975_Epitope_Rep2 1095.5560380643099 1095.5549499358601 44.383 2 -0.9101984798796954 0.2746295165676861 1.0 ['ENSG00000127948|ENST00000461988|POR', 'ENST00000487247.5_1_7:75612754-75613000:+|nuORF'] 128207 25249 VRVGALLL True H1975_Epitope_Rep2 839.5592729699499 839.5587249679301 103.72 1 -0.9102016544416142 0.2746295165676861 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 100292 5411 SLLTSPPP True NCI_RA007_Epitope_Rep5 810.44871946146 810.44762993586 27.501 2 -0.9102339974055246 0.27463958151216195 1.0 ['ENST00000430430.5_1_8:81398575-81399061:+|nuORF'] 65867 13573 LSKVEKARQ True PC9_epitope_Rep2 1057.6243924076498 1057.6232899358602 57.501 2 -0.91025175339807 0.2746635215762453 1.0 ['nc|ENSG00000263001|P78347-2|GTF2I', 'nc|ENSG00000263001|P78347-4|GTF2I', 'nc|ENSG00000263001|P78347-3|GTF2I', 'ENSG00000263001|ENST00000573035|GTF2I', 'ENST00000544802.5_1_7:72593260-72619478:+|nuORF'] 5977 6144 APKYLLKNYDR True NCI_RA007_Epitope_Rep5 1379.75613485319 1379.7544949037901 30.313 3 -0.9103617597215402 0.2746684055718963 1.0 ['ENSG00000128268|ENST00000341184|MGAT3'] 11124 7507 DEEERRRRVFD True NCI_RA007_Epitope_Rep1 1505.73350191565 1505.73184490379 33.193 3 -0.9103644147929492 0.2746684055718963 1.0 ['ENSG00000110429|ENST00000265651|FBXO3'] 79444 6647 PGPLSKQGS True NCI_RA007_Epitope_Rep2 869.46068112749 869.46013496793 30.465 1 -0.9103796366588797 0.2746684055718963 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 30844 10927 GAQKMCRH True H1975_Epitope_Rep1 929.43237528801 929.43126993586 46.993 2 -0.9103869625756466 0.2746684055718963 1.0 ['ENST00000554508.5_1_14:69367621-69387744:-|nuORF'] 37334 17579 GVVVITLP True PC9_epitope_Rep1 796.5058404147599 796.50474993586 72.409 2 -0.9104071090517389 0.2746684055718963 1.0 ['ENSG00000197233|ENST00000335302|OR1J2'] 105187 12319 STNSSRFPP True PC9_epitope_Rep3 991.4723084403499 991.47120993586 52.411 2 -0.9104122492637066 0.2746684055718963 1.0 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant', 'nc|ENSG00000196730|P53355-4|DAPK1', 'nc|ENSG00000196730|P53355-2|DAPK1'] 25017 7161 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 32.937 2 -0.9104412766518506 0.2747062169624152 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 105093 5833 STLDYRLNP True NCI_RA007_Epitope_Rep5 1077.54547338061 1077.54436993586 29.121 2 -0.91049618001453 0.27473015344487917 1.0 ['ENST00000561481.1_1_16:74495883-74496577:-|nuORF'] 60437 14071 LILDHLPSVTK True H1975_Epitope_Rep1 1234.72852312302 1234.72742993586 59.29 2 -0.9105171052023241 0.2747364039955605 1.0 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant', 'nc|ENSG00000127914|Q99996-4|AKAP9', 'ENST00000493453.1_1_7:91570251-91670224:+|nuORF'] 42859 15642 IFQEKNTI True PC9_epitope_Rep1 991.53384606775 991.53274993586 64.988 2 -0.9105189226884027 0.2747364039955605 1.0 ['ENST00000482172.5_1_13:21237473-21265311:+|nuORF'] 109318 13347 TGGGGGGD True NCI_RA007_Epitope_Rep4 576.21396849936 576.2134249679301 58.49 1 -0.9105468209262856 0.2747464657815513 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 30955 10106 GASQRKLSSN True H1975_Epitope_Rep3 1046.54687036294 1046.54576993586 43.914 2 -0.9105735885027194 0.27476658851601626 1.0 ['nc|ENSG00000264575|Q96FQ7|LINC00526', 'ENST00000581067.1_1_18:5237365-5237662:-|nuORF'] 8649 14876 AVAQFKKY True PC9_epitope_Rep5 953.5334521449299 953.53234993586 62.224 2 -0.9105776358016284 0.27476658851601626 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 67669 12388 LTFPMWNP True PC9_epitope_Rep1 1004.47897404392 1004.47786993586 52.51 2 -0.91059909638129 0.27477664946451363 1.0 ['ENST00000403290.5_1_11:13331558-13347974:+|nuORF'] 129961 20596 VTNPENMFSR True PC9_epitope_Rep1 1193.54990713805 1193.5488099358602 84.037 2 -0.9107281822456238 0.27482832766872445 1.0 ['HSPG2|p.L1617V|1|0.38|ENSG00000142798|chr1:21862007-21862007|G/C|missense_variant'] 60850 18848 LKLPVDQKCEH True PC9_epitope_Rep2 1308.68600668804 1308.68437490379 77.867 3 -0.9107425106361977 0.2748307624015093 1.0 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant'] 24881 1217 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 6.4396 2 -0.9107521615569801 0.2748307624015093 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 45932 7127 ISSAIQLLEDP True H1975_Epitope_Rep1 1184.6288686514 1184.6277699358602 32.44 2 -0.9107636168304961 0.2748307624015093 1.0 ['ENSG00000115216|ENST00000379852|NRBP1', 'ENST00000460499.5_1_2:27659579-27664676:+|nuORF'] 68016 7065 LTMGSGKG True PC9_epitope_Rep5 749.3741746222099 749.37306993586 32.143 2 -0.9107853820710176 0.27484082176198865 1.0 ['ENST00000531068.5_1_11:64949924-64950017:+|nuORF'] 139088 18739 YSMYVLWVV True H1975_Epitope_Rep2 1158.5783537320199 1158.5772499358602 77.785 2 -0.9108279023516279 0.27490636704119853 1.0 ['ENST00000295417.3_1_2:208627897-208628047:-|nuORF'] 78927 12127 PFEIVWGMRRP True PC9_epitope_Rep4 1386.7230609030998 1386.7219699358602 54.457 2 -0.910915863583272 0.27493029643089983 1.0 ['ENST00000488457.1_1_2:25600201-25602432:-|nuORF'] 65589 6340 LSGHSQQTSL True PC9_epitope_Rep4 1056.51998690876 1056.5188899358602 31.462 2 -0.911026634332153 0.2750097098152361 1.0 ['ENSG00000134852|ENST00000513440|CLOCK', 'ENST00000511124.1_1_4:56304552-56315592:-|nuORF', 'ENST00000479384.1_1_4:56308597-56309892:-|nuORF'] 83898 10503 QEINYTRPV True NCI_RA007_Epitope_Rep4 1118.57202248162 1118.57092993586 47.249 2 -0.911056755436551 0.2750260073514113 1.0 ['nc|ENSG00000150672|Q15700-5|DLG2', 'nc|ENSG00000150672|Q15700-3|DLG2', 'nc|ENSG00000150672|Q15700|DLG2', 'nc|ENSG00000150672|Q15700-4|DLG2', 'ENSG00000150672|ENST00000376104|DLG2'] 10292 7805 CGWDIAGDP True NCI_RA007_Epitope_Rep1 932.3698175177599 932.36872993586 34.351 2 -0.9110607291942567 0.2750260073514113 1.0 ['ENSG00000127666|ENST00000248244|TICAM1'] 97652 12331 SHCMKMLV True PC9_epitope_Rep4 947.4391004612299 947.43800993586 55.24 2 -0.9110774478541794 0.2750260073514113 1.0 ['GPR139|p.I335M|2|0.05|ENSG00000180269|chr16:20031792-20031792|G/C|missense_variant'] 93161 13271 RRRRRDWFWR True PC9_epitope_Rep3 1588.8712136618396 1588.86901987172 56.082 4 -0.9111341598248883 0.2750499334221039 1.0 ['ENST00000361972.8_1_10:7212945-7217999:-|nuORF'] 118966 15013 VEEYVYEFRDK True H1975_Epitope_Rep1 1475.6932598131095 1475.6921699358602 62.993 2 -0.9111555983486009 0.2750599886264338 1.0 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 88713 23340 RCRRRRRRRRL True PC9_epitope_Rep6 1639.0138126579398 1639.01215490379 102.88 3 -0.9111839873650482 0.2750662283804214 1.0 ['ENST00000550735.6_1_12:112280040-112280175:+|nuORF'] 2575 4420 AERYYAWREE True NCI_RA007_Epitope_Rep2 1371.62076357919 1371.6191249037902 21.826 3 -0.9111902615115227 0.2750662283804214 1.0 ['ENSG00000189045|ENST00000601380|ANKDD1B'] 12369 9228 DIYRQRSR True NCI_RA007_Epitope_Rep3 1092.57883919756 1092.57774993586 43.394 2 -0.9112179297520777 0.27510402219140084 1.0 ['nc|ENSG00000114378|Q12794-4|HYAL1', 'nc|ENSG00000114378|Q12794-7|HYAL1', 'nc|ENSG00000114378|Q12794-2|HYAL1', 'ENSG00000114378|ENST00000395144|HYAL1'] 121195 19943 VGGLSTSVPP True PC9_epitope_Rep4 912.4916469026 912.49054993586 84.846 2 -0.9112554172259199 0.27512412970513994 1.0 ['MAGEE1|p.G325V|1|0.44|ENSG00000198934|chrX:76428904-76428904|G/T|missense_variant'] 87321 18675 QTADEEEDQPL True PC9_epitope_Rep1 1273.5310050849298 1273.5293549037901 76.623 3 -0.9112563539871359 0.27512412970513994 1.0 ['nc|ENSG00000155886|Q9UI40-2|SLC24A2', 'ENSG00000155886|ENST00000341998|SLC24A2'] 15699 11635 EDAAPTKPAP True H1975_Epitope_Rep2 995.4923751785899 995.49126993586 49.823 2 -0.9112644641888068 0.27513418304370135 1.0 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 64407 9728 LQRKRPFSFWK True NCI_RA007_Epitope_Rep2 1491.8462872702696 1491.8451899358602 42.461 2 -0.9113079143340386 0.2751366044434582 1.0 ['ENST00000335503.3_1_7:56123338-56123398:+|nuORF'] 24919 21678 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 88.721 2 -0.9113359077041124 0.2751366044434582 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 54883 17070 LAGLDPPHSV True PC9_epitope_Rep4 1004.52909504048 1004.52798993586 73.658 2 -0.9113398970454892 0.2751366044434582 1.0 ['ENST00000498406.1_1_22:21355751-21355970:-|nuORF'] 25916 14893 FGLPPKRLWR True NCI_RA007_Epitope_Rep3 1268.75059598028 1268.74948993586 66.01 2 -0.9113511253164612 0.2751466570513265 1.0 ['ENST00000261783.3_1_14:68086627-68108954:+|nuORF'] 107985 3694 TCRGLFVLCQY True H1975_Epitope_Rep1 1301.6260492837698 1301.62441490379 18.685 3 -0.91139221842547 0.2751567093803739 1.0 ['ENSG00000183813|ENST00000330953|CCR4'] 90554 24815 RKFVGGPG True PC9_epitope_Rep4 816.4606215578398 816.46007496793 103.96 1 -0.9114219659038265 0.275166761430612 1.0 ['ENSG00000203740|ENST00000439373|NTMT2'] 13458 12733 DPANEKLLTVF True H1975_Epitope_Rep1 1245.6605031328502 1245.6594099358601 54.037 2 -0.9114642756751768 0.2751768132020524 1.0 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'ENST00000505378.5_1_4:99182716-99313239:+|nuORF', 'ENST00000507303.5_1_4:99182716-99313239:+|nuORF', 'ENST00000503745.1_1_4:99273670-99308609:+|nuORF', 'ENST00000511379.5_1_4:99182716-99300325:+|nuORF'] 29159 6732 FTVTANAV True PC9_epitope_Rep2 821.4283183700499 821.4272299358599 31.304 2 -0.9114940111466937 0.27519691590858664 1.0 ['nc|ENSG00000158636|Q7Z589-2|EMSY', 'nc|ENSG00000158636|Q7Z589-6|EMSY', 'nc|ENSG00000158636|Q7Z589|EMSY', 'nc|ENSG00000158636|Q7Z589-5|EMSY', 'nc|ENSG00000158636|Q7Z589-4|EMSY', 'ENSG00000158636|ENST00000695367|EMSY', 'ENST00000528826.1_1_11:76157982-76169407:+|nuORF', 'ENST00000427574.6_1_11:76157982-76207767:+|nuORF'] 45626 9963 ISHHTTVPLT True PC9_epitope_Rep2 1104.5927579262 1104.5916699358602 43.653 2 -0.9115033752029595 0.27519691590858664 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'nc|ENSG00000116641|Q96N67-7|DOCK7'] 71574 8368 M[Oxidation]LEERDRLLDT True H1975_Epitope_Rep1 1405.6871292672897 1405.68602993586 37.115 2 -0.9115272097838548 0.2752069668437036 1.0 ['PPFIA1-MTL5|2|fusion', 'nc|ENSG00000131626|Q13136-2|PPFIA1', 'PPFIA1-MTL5|1|fusion', 'ENSG00000131626|ENST00000253925|PPFIA1', 'PPFIA1-ALDH3B1|1|fusion'] 58331 16671 LETSPRLIR True PC9_epitope_Rep5 1083.64004247179 1083.6389499358602 69.129 2 -0.9116100970851295 0.27526485107327087 1.0 ['ENSG00000118492|ENST00000397944|ADGB', 'nc|ENSG00000118492|Q8N7X0-2|ADGB'] 24916 21335 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 87.307 2 -0.9116318400339266 0.27526485107327087 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 105427 13131 SVALACAHGHL True PC9_epitope_Rep2 1077.53894853153 1077.53784993586 55.781 2 -0.9116351951567212 0.27526485107327087 1.0 ['ENST00000482108.1_2_7:94297339-94297486:+|nuORF'] 44 11151 AAAEFFHSNYD True H1975_Epitope_Rep3 1270.5254662120199 1270.52436993586 47.987 2 -0.9118088857632742 0.2752672666010344 1.0 ['ENSG00000065060|ENST00000192788|BLTP3A'] 40314 23535 HRRRAKAL True H1975_Epitope_Rep1 1006.6260641734998 1006.62496993586 97.772 2 -0.9118255842158781 0.2752672666010344 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000470518.5_1_22:40803281-40805023:+|nuORF', 'ENST00000478085.5_1_22:40802939-40803686:+|nuORF'] 67309 17015 LTDPQIHSV True PC9_epitope_Rep2 1008.52400966004 1008.52290993586 70.699 2 -0.9118517147917076 0.2752672666010344 1.0 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 66625 9293 LSSPYDHGLYP True NCI_RA007_Epitope_Rep2 1247.58225281215 1247.5811499358601 40.758 2 -0.9119471173872353 0.2753528742963312 1.0 ['ENST00000250160.10_1_8:134203311-134225195:+|nuORF'] 45333 13505 ISDARSDLL True PC9_epitope_Rep1 988.5189242796 988.51782993586 56.802 2 -0.9119647419591129 0.2753528742963312 1.0 ['nc|ENSG00000132970|Q9UPY6-2|WASF3', 'ENSG00000132970|ENST00000335327|WASF3'] 17804 8477 EHWEKWEDVKR True PC9_epitope_Rep1 1540.7422756941999 1540.7406449037899 37.441 3 -0.9119655513378111 0.2753528742963312 1.0 ['nc|ENSG00000204904|Q5VT33|LINC01545'] 119490 10708 VEQINRKQD True NCI_RA007_Epitope_Rep2 1128.5887351749197 1128.5876299358601 46.25 2 -0.9119922488311968 0.27535769742679683 1.0 ['ENSG00000149781|ENST00000345728|FERMT3', 'nc|ENSG00000149781|Q86UX7|FERMT3'] 79878 16298 PILAASPAA True PC9_epitope_Rep2 809.4647038787699 809.46360993586 67.935 2 -0.9119944886756675 0.27535769742679683 1.0 ['ENST00000374748.5_1_10:35360216-35378901:-|nuORF'] 97083 12799 SEYNWGGP True NCI_RA007_Epitope_Rep5 908.3664463894798 908.36534993586 55.911 2 -0.9120400541135812 0.27535769742679683 1.0 ['nc|ENSG00000142186|Q96KG9-3|SCYL1', 'nc|ENSG00000142186|Q96KG9-4|SCYL1', 'nc|ENSG00000142186|Q96KG9-2|SCYL1', 'ENSG00000142186|ENST00000270176|SCYL1', 'ENST00000534462.1_1_11:65305333-65305925:+|nuORF', 'ENST00000532290.1_1_11:65305356-65305680:+|nuORF'] 25014 23503 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 95.191 2 -0.9120457117364024 0.27535769742679683 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 99681 16487 SLGDLFLETF True PC9_epitope_Rep4 1140.57029114612 1140.56918993586 71.387 2 -0.9120616796026456 0.27535769742679683 1.0 ['ENSG00000168936|ENST00000382936|TMEM129', 'ENST00000460722.1_1_4:1718909-1719921:-|nuORF', 'ENST00000476253.1_1_4:1718909-1719614:-|nuORF'] 5274 5555 ALRGRAARPEP True NCI_RA007_Epitope_Rep2 1192.6788875919997 1192.67725490379 26.222 3 -0.9120633254574988 0.27535769742679683 1.0 ['ENST00000254584.6_1_11:6501650-6502526:-|nuORF'] 24909 19231 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 78.96 2 -0.9120703820322483 0.2753677439032844 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 121369 23479 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 101.89 2 -0.9121134244049997 0.27537397235585254 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 45246 9800 IRQFEEQFERE True NCI_RA007_Epitope_Rep1 1509.7212058964499 1509.7195649037901 42.122 3 -0.9121204607617251 0.27537397235585254 1.0 ['nc|ENSG00000031003|Q9NYF5-2|FAM13B', 'nc|ENSG00000031003|Q9NYF5|FAM13B', 'ENSG00000031003|ENST00000689681|FAM13B', 'nc|ENSG00000031003|Q9NYF5-3|FAM13B'] 12674 5521 DLERIFGLP True H1975_Epitope_Rep3 1058.5760452328998 1058.57494993586 26.284 2 -0.9121411394927292 0.27537879312973923 1.0 ['ENSG00000119943|ENST00000370575|PYROXD2'] 16509 7582 EENKLLKEQ True H1975_Epitope_Rep3 1129.59790287629 1129.5968099358602 34.145 2 -0.9121482282367755 0.27537879312973923 1.0 ['ENSG00000135205|ENST00000285871|CCDC146', 'nc|ENSG00000135205|Q8IYE0-2|CCDC146'] 26862 17747 FLFAPLLP True PC9_epitope_Rep3 916.5422259234799 916.54112993586 73.46 2 -0.9121535139960287 0.27537879312973923 1.0 ['ENST00000512091.6_2_4:62067041-62067179:+|nuORF'] 3216 11107 AGEVERTSRAV True NCI_RA007_Epitope_Rep2 1173.61019889549 1173.60910993586 47.783 2 -0.912157622774284 0.27537879312973923 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 60882 6108 LKQRTWMEEHY True PC9_epitope_Rep4 1519.7241831019098 1519.7225249037901 30.503 3 -0.9122054631511762 0.27537879312973923 1.0 ['ENST00000504321.1_1_4:56755058-56759725:+|nuORF'] 31195 17772 GDIVMTQSPL True NCI_RA007_Epitope_Rep3 1059.52704643515 1059.5259499358601 77.921 2 -0.9122227867594324 0.27537879312973923 1.0 ['nc|ENSG00000244116|A0A075B6P5|IGKV2-28'] 130643 19006 VVARICEPI True PC9_epitope_Rep5 998.5582869937799 998.55718993586 78.134 2 -0.9122720019849097 0.2754051094384608 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000494204.1_1_X:24833141-24859977:+|nuORF'] 104360 12750 SSFLRRLYEEE True PC9_epitope_Rep1 1427.7044932031502 1427.70338993586 53.917 2 -0.9123455705340033 0.2754051094384608 1.0 ['ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386'] 91182 8916 RLPTPEQI True PC9_epitope_Rep6 952.5341804209199 952.53308993586 44.266 2 -0.9123792852623581 0.2754051094384608 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 138641 21388 YRRNFNYRRRR True NCI_RA007_Epitope_Rep2 1655.8981566856698 1655.8970499358602 88.503 2 -0.9123860910916569 0.2754051094384608 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 116100 11228 TVSIRVRPD True PC9_epitope_Rep1 1041.59309227937 1041.59198993586 48.068 2 -0.9124320292726518 0.275429014998198 1.0 ['ENST00000478515.1_1_3:4856448-4856586:+|nuORF'] 41783 11063 IDRETDFFPER True NCI_RA007_Epitope_Rep2 1423.67319307487 1423.6720899358602 47.628 2 -0.9124354482920255 0.2754376481350576 1.0 ['nc|ENSG00000071967|Q53TN4-2|CYBRD1'] 36204 23604 GVFTKRQRK True PC9_epitope_Rep3 1118.6672602791398 1118.6661699358601 96.078 2 -0.9125118781769207 0.2754376481350576 1.0 ['ENSG00000121053|ENST00000225371|EPX'] 73707 12668 NGSQFFITTV True PC9_epitope_Rep4 1112.55022440788 1112.54912993586 56.573 2 -0.9125128667563638 0.2754376481350576 1.0 ['ENSG00000171497|ENST00000307720|PPID', 'ENSG00000166794|ENST00000300026|PPIB', 'CSNK1G1-PPIB|1|fusion'] 123459 15348 VIFFFFFWYFR True NCI_RA007_Epitope_Rep1 1617.8172785577697 1617.8161899358602 63.778 2 -0.9125260127844096 0.2754376481350576 1.0 ['ENST00000316423.10_1_4:39501678-39501759:-|nuORF'] 100457 16998 SLPGLLSHLL True PC9_epitope_Rep1 1048.62808080576 1048.6269899358601 70.206 2 -0.9125415181838681 0.2754376481350576 1.0 ['ENST00000539644.5_1_12:124497619-124497844:+|nuORF'] 16092 11826 EEDRLRERRR True NCI_RA007_Epitope_Rep1 1413.75490606657 1413.75380993586 49.98 2 -0.9125651836920681 0.2754438730959542 1.0 ['ENSG00000171150|ENST00000394861|SOCS5'] 67898 16310 LTKRYDAL True PC9_epitope_Rep1 978.5498304850598 978.54872993586 67.556 2 -0.9125724226936462 0.2754438730959542 1.0 ['ENSG00000165156|ENST00000395571|ZHX1'] 133916 13102 WNNLRVTRI True PC9_epitope_Rep4 1170.6621748987 1170.66106993586 58.29 2 -0.9125913344111035 0.27545009771174345 1.0 ['ENST00000572844.1_1_17:7399627-7399921:+|nuORF'] 79329 19477 PGKREPLRSVL True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74480993586 81.807 2 -0.912615726643655 0.27545009771174345 1.0 ['ENSG00000182170|ENST00000332314|MRGPRG'] 82772 23561 PVRKGGGG True NCI_RA007_Epitope_Rep4 726.4136713654198 726.41312496793 102.23 1 -0.9126520242517728 0.275470181420038 1.0 ['SVA_D_dup1293|chr19:38797148-38798824:-|6.990441010193571|0.2829324247822702|4.63|492.0|17|2|sense'] 93239 24949 RRRRRRRWRW True PC9_epitope_Rep5 1638.9780787722198 1638.97642490379 101.15 3 -0.9127215069267175 0.275470181420038 1.0 ['SLC4A2|p.Q100Rfs*145|1|0.3|ENSG00000164889|chr7:151064603-151064603|C/-|frameshift_variant'] 15221 13295 EAFSGEPFNLH True PC9_epitope_Rep3 1246.56185172074 1246.56074993586 56.173 2 -0.9127265373398057 0.27547258717223794 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1'] 25013 22625 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 91.836 2 -0.9127478708357842 0.27547258717223794 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 58688 19820 LFIPWKKLY True H1975_Epitope_Rep2 1206.71650188734 1206.7154099358602 82.217 2 -0.9127918629751417 0.27547258717223794 1.0 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1', 'ENST00000494526.1_1_10:5948484-5951317:+|nuORF'] 57110 12761 LEENKVKVLHN True NCI_RA007_Epitope_Rep2 1321.73539940861 1321.7343099358602 54.255 2 -0.9128130326570516 0.2754749927244003 1.0 ['nc|ENSG00000164144|P53367-2|ARFIP1', 'nc|ENSG00000164144|P53367-3|ARFIP1', 'ENSG00000164144|ENST00000353617|ARFIP1', 'ENST00000514499.1_1_4:153804397-153831368:+|nuORF'] 9730 18891 AYKFQRKRRHK True NCI_RA007_Epitope_Rep1 1516.8851323904798 1516.88402993586 77.625 2 -0.9128256801571625 0.2754749927244003 1.0 ['ENSG00000214376|ENST00000409977|VSTM5'] 10133 7621 CASAAAPV True H1975_Epitope_Rep1 688.3214107733601 688.3208649679301 34.303 1 -0.9128268440774309 0.2754749927244003 1.0 ['nc|ENSG00000213995|Q8IW45-2|NAXD', 'nc|ENSG00000213995|Q8IW45|NAXD', 'ENSG00000213995|ENST00000680254|NAXD'] 24912 19852 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 81.426 2 -0.9128626590096239 0.2754988913525499 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 77848 6461 PAGGPVLPQLK True NCI_RA007_Epitope_Rep4 1075.63897984263 1075.6378899358601 31.451 2 -0.9129063005427188 0.2755089314172475 1.0 ['nc|ENSG00000174791|Q13671-2|RIN1', 'ENSG00000174791|ENST00000311320|RIN1', 'ENST00000526246.5_1_11:66099749-66102792:-|nuORF'] 45622 7529 ISHFFCDIRP True PC9_epitope_Rep1 1233.59646340765 1233.5948249037901 33.777 3 -0.9129406747057778 0.27551755674417316 1.0 ['nc|ENSG00000249730|P0C629|OR10J4'] 25639 10268 FEVYVDTDAK True PC9_epitope_Rep2 1185.5553693579698 1185.55426993586 44.829 2 -0.9129489920616043 0.27551755674417316 1.0 ['nc|ENSG00000168778|Q96GX1-2|TCTN2', 'ENSG00000168778|ENST00000303372|TCTN2'] 4077 10272 AHSHSYSH True PC9_epitope_Rep1 924.3838277891202 924.38272993586 44.396 2 -0.9129549985775686 0.27551755674417316 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1', 'ENST00000548142.1_1_12:56532791-56536718:+|nuORF'] 33002 9009 GIVKTLLA True NCI_RA007_Epitope_Rep5 813.5323895157699 813.53128993586 41.312 2 -0.9129697583538453 0.27551755674417316 1.0 ['ENST00000405257.1_1_6:4703010-4703685:+|nuORF'] 102290 21278 SPVDLYILM True PC9_epitope_Rep3 1049.54671925057 1049.54562993586 87.141 2 -0.9129725154614375 0.27551755674417316 1.0 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4', 'ENST00000580542.5_1_17:73720783-73737087:+|nuORF', 'nc|ENSG00000132470|P16144-5|ITGB4'] 91699 19911 RPGPRHLR True NCI_RA007_Epitope_Rep2 987.5838650083499 987.58276993586 82.45 2 -0.9129918539902294 0.275519960093669 1.0 ['ENST00000329478.3_1_19:1912732-1912891:+|nuORF'] 104852 3530 STEPPYSQK True NCI_RA007_Epitope_Rep2 1035.48728979815 1035.48618993586 18.382 2 -0.9129976205732917 0.275519960093669 1.0 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENST00000434005.1_1_7:22551057-22551540:-|nuORF', 'ENST00000359165.5_1_12:19610040-19610154:-|nuORF', 'ENST00000401075.3_1_1:31961199-31961370:-|nuORF', 'ENST00000443590.1_1_2:107314616-107314670:-|nuORF'] 68608 13296 LTYSKNKVLQK True NCI_RA007_Epitope_Rep1 1320.7765359446 1320.77542993586 55.721 2 -0.9129985631828688 0.275519960093669 1.0 ['ENSG00000179387|ENST00000323570|ELMOD2'] 115550 11359 TVHIQVNDV True PC9_epitope_Rep4 1023.53490869691 1023.53380993586 51.467 2 -0.9130782876922704 0.27557156713315784 1.0 ['ENSG00000171603|ENST00000377298|CLSTN1', 'nc|ENSG00000171603|O94985-2|CLSTN1'] 129720 24214 VTKARLTDK True PC9_epitope_Rep1 1030.61349337078 1030.6123899358602 97.955 2 -0.9131001620987869 0.2755816047997118 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 88615 21851 RAPDAVYTE True H1975_Epitope_Rep2 1020.48762415132 1020.48652993586 90.36 2 -0.9131338644294453 0.27559164218810617 1.0 ['ENSG00000089327|ENST00000392219|FXYD5'] 31182 10618 GDGAEQARRP True H1975_Epitope_Rep1 1055.5108192073899 1055.5097299358602 45.799 2 -0.9131738033464312 0.2756117161304625 1.0 ['ENST00000606529.5_1_1:205313392-205325703:-|nuORF', 'ENST00000606111.1_1_1:205313392-205326121:-|nuORF'] 55053 4861 LALFRVAVDK True NCI_RA007_Epitope_Rep5 1130.6811790077797 1130.67952490379 25.389 3 -0.9131815132714757 0.2756117161304625 1.0 ['nc|ENSG00000169169|Q8TCG5-2|CPT1C', 'ENSG00000169169|ENST00000598293|CPT1C', 'ENST00000596701.1_1_19:50215059-50215239:+|nuORF', 'ENST00000595901.5_1_19:50215059-50216859:+|nuORF'] 26621 9836 FKREHMMSCYW True H1975_Epitope_Rep3 1516.64138207808 1516.6402899358602 42.863 2 -0.9132810554690243 0.27567717353654314 1.0 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 24910 19324 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 79.32 2 -0.9133034181939156 0.27568720904455774 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 115327 18468 TVDWDEWKYYF True PC9_epitope_Rep4 1550.67179609254 1550.67068993586 79.108 2 -0.9133403393329713 0.27569342458921003 1.0 ['ENST00000411846.6_1_1:108815923-108880006:+|nuORF'] 129522 14451 VTFNLYHFL True PC9_epitope_Rep1 1152.5967806774802 1152.59512490379 60.408 3 -0.9133443797205814 0.27569342458921003 1.0 ['ENSG00000070269|ENST00000261556|TMEM260'] 14486 18745 DTVFHVFDK True PC9_epitope_Rep1 1106.53965972418 1106.53856993586 76.89 2 -0.9133523344043991 0.27569963978941536 1.0 ['ENSG00000083520|ENST00000377767|DIS3', 'nc|ENSG00000083520|Q9Y2L1-2|DIS3'] 43853 7297 ILCRWVVPFFK True NCI_RA007_Epitope_Rep4 1406.7896839109396 1406.78858993586 34.705 2 -0.9133621190661648 0.27569963978941536 1.0 ['ENST00000313640.11_1_13:43460845-43460983:-|nuORF'] 18969 4915 ELFMSLYDPIK True NCI_RA007_Epitope_Rep2 1354.68427535254 1354.68262490379 23.738 3 -0.9133917554680604 0.2757096742910184 1.0 ['DOCK2|p.N248I|1|0.63|ENSG00000134516|chr5:169684332-169684332|A/T|missense_variant'] 38680 9300 HHRVPREEDEE True PC9_epitope_Rep1 1431.6491035853498 1431.64800993586 40.627 2 -0.9134275763584275 0.27573356238397384 1.0 ['ENSG00000130528|ENST00000252825|HRC'] 105426 7618 SVAKNFTK True NCI_RA007_Epitope_Rep4 893.49706663621 893.49596993586 35.957 2 -0.9135158360379536 0.27573595622359215 1.0 ['REPS2|p.F310del|1|0.24|ENSG00000169891|chrX:17052398-17052400|CTT/-|inframe_deletion'] 100311 4447 SLLYYSYK True NCI_RA007_Epitope_Rep5 1035.5276980581498 1035.52660993586 23.748 2 -0.9135228557498672 0.27573595622359215 1.0 ['ENST00000585735.1_1_17:40342468-40343067:-|nuORF'] 16383 14420 EELHGPGPV True PC9_epitope_Rep5 933.4555957470499 933.45448993586 60.466 2 -0.9135437697592531 0.27573595622359215 1.0 ['nc|ENSG00000170291|Q8TE02-1|ELP5', 'nc|ENSG00000170291|Q8TE02-2|ELP5', 'ENSG00000170291|ENST00000396628|ELP5'] 129572 18417 VTGKEYSV True PC9_epitope_Rep5 881.44944773745 881.44834993586 75.861 2 -0.9136273692151482 0.27574838271758856 1.0 ['ENST00000552656.5_1_12:56610319-56615704:-|nuORF', 'ENST00000345093.8_1_12:56610319-56615573:-|nuORF'] 86132 9596 QPRKEGRWAP True H1975_Epitope_Rep1 1223.65233849099 1223.65124993586 41.836 2 -0.9136405222340405 0.27574838271758856 1.0 ['ENST00000431183.6_2_2:130909932-130910058:-|nuORF'] 86990 21611 QRWKRIRQRWK True H1975_Epitope_Rep2 1639.9647796935099 1639.96257987172 89.404 4 -0.9136435188757516 0.27574838271758856 1.0 ['ENSG00000267796|ENST00000301159|LIN37', 'ENST00000595455.1_1_19:36244761-36245372:+|nuORF'] 30631 8466 GALDHSDQPDP True NCI_RA007_Epitope_Rep1 1150.4890807032998 1150.48798993586 36.93 2 -0.9136671700675076 0.27574838271758856 1.0 ['nc|ENSG00000048740|O95319-5|CELF2', 'nc|ENSG00000048740|O95319-2|CELF2', 'nc|ENSG00000048740|O95319|CELF2', 'nc|ENSG00000048740|O95319-4|CELF2', 'nc|ENSG00000048740|O95319-3|CELF2', 'ENSG00000048740|ENST00000633077|CELF2'] 108485 9339 TEEVRNILQ True H1975_Epitope_Rep1 1100.5825871653199 1100.5814899358602 40.83 2 -0.9136914203224052 0.27577226762709517 1.0 ['ENSG00000112365|ENST00000230122|ZBTB24'] 94480 18593 RYGRFRKF True H1975_Epitope_Rep3 1128.6304808476 1128.6288449037902 77.976 3 -0.9137254213572094 0.2757784796099291 1.0 ['ENST00000560046.1_1_14:24586548-24588423:+|nuORF', 'nc|ENSG00000100897|Q8TEB1-3|DCAF11', 'nc|ENSG00000100897|Q8TEB1-2|DCAF11', 'ENSG00000100897|ENST00000446197|DCAF11'] 69282 10206 LVPELQAT True PC9_epitope_Rep3 869.4858332461699 869.48472993586 44.208 2 -0.913731514098686 0.2757784796099291 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 10519 12562 CPFGENCF True NCI_RA007_Epitope_Rep5 915.3255101776299 915.32440993586 54.974 2 -0.9137447420414362 0.2757985428151924 1.0 ['nc|ENSG00000238222|Q13434|MKRN4P'] 75256 18989 NPLLSPRCSI True PC9_epitope_Rep4 1098.58556437078 1098.5844699358602 81.133 2 -0.9137501185840636 0.2757985428151924 1.0 ['nc|ENSG00000148541|Q8NE31-2|FAM13C', 'nc|ENSG00000148541|Q8NE31-3|FAM13C', 'nc|ENSG00000148541|Q8NE31-5|FAM13C', 'nc|ENSG00000148541|Q8NE31-4|FAM13C', 'ENSG00000148541|ENST00000618804|FAM13C'] 102611 8430 SQAPPVPLASP True NCI_RA007_Epitope_Rep1 1062.57095985246 1062.5698699358602 36.793 2 -0.9138320778647983 0.2758047537259682 1.0 ['nc|ENSG00000003249|Q9H9R9-3|DBNDD1'] 63147 5617 LNRGQNVSI True NCI_RA007_Epitope_Rep5 999.54614208695 999.54504993586 28.294 2 -0.9138504034676191 0.2758047537259682 1.0 ['DPP6|p.A402G|1|0.22|ENSG00000130226|chr7:154794147-154794147|C/G|missense_variant'] 93303 19803 RRRYLRRKER True NCI_RA007_Epitope_Rep3 1487.9021794369498 1487.90053490379 86.301 3 -0.9139211531321851 0.2758424865299112 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 60943 18079 LLAALTAPS True NCI_RA007_Epitope_Rep5 855.50656869075 855.50546993586 76.338 2 -0.9139491545254655 0.27585872576177284 1.0 ['ENST00000155926.8_1_2:12857684-12857711:+|nuORF'] 129082 7790 VTARRTSLRP True PC9_epitope_Rep1 1155.68363861927 1155.6820049037901 34.788 3 -0.9139814164105128 0.27585872576177284 1.0 ['ENST00000569673.2_1_15:74044535-74044889:-|nuORF'] 136930 13793 YKFTKESRH True PC9_epitope_Rep6 1194.61455599994 1194.6129149037902 64.854 3 -0.9139906869043537 0.27585872576177284 1.0 ['ENSG00000163075|ENST00000413369|CFAP221', 'nc|ENSG00000163075|Q4G0U5-2|CFAP221'] 136845 11028 YIVQLKRHFMF True PC9_epitope_Rep1 1480.8013112237998 1480.79965490379 47.308 3 -0.9140529021544412 0.2758826055040789 1.0 ['DYRK1B|p.H175Q|1|0.29|ENSG00000105204|chr19:39828579-39828579|G/T|missense_variant'] 25010 20968 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 85.477 2 -0.9140787291704995 0.27590648458491457 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 15789 5602 EDFWNRIRQEQ True PC9_epitope_Rep4 1519.71678922235 1519.7151449037901 28.34 3 -0.9141562468576396 0.275958062684376 1.0 ['ENST00000476464.5_1_3:64008316-64008487:-|nuORF'] 18245 14068 EISFWLNL True PC9_epitope_Rep4 1020.5280324113199 1020.52692993586 62.023 2 -0.9142266079130588 0.2759819400587225 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 24911 19670 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 80.704 2 -0.9142939839112996 0.2759981719223898 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 68916 13472 LVFFFFFFLRQ True H1975_Epitope_Rep1 1509.8172785577697 1509.8161899358602 56.937 2 -0.9143030608774468 0.2759981719223898 1.0 ['ENST00000294008.3_1_16:3632019-3632346:-|nuORF'] 24906 18097 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 74.535 2 -0.9143048582209028 0.2759981719223898 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 87191 22843 QSLIPFVQL True PC9_epitope_Rep2 1043.60153170475 1043.60097496793 93.356 1 -0.9143367399944553 0.27602204741856856 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'nc|ENSG00000122512|P54278-2|PMS2', 'nc|ENSG00000122512|P54278-3|PMS2'] 95443 10053 SALLLWFLFW True NCI_RA007_Epitope_Rep3 1294.7114165069 1294.70977490379 46.637 3 -0.9143914391273749 0.27605977094268025 1.0 ['nc|ENSG00000188487|Q1MX18-6|INSC'] 24880 1022 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 5.415 2 -0.9144645652189849 0.2760645295298761 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 60141 7446 LHWGWLGWK True PC9_epitope_Rep2 1181.61343380113 1181.61178490379 34.017 3 -0.9144966750623383 0.2760645295298761 1.0 ['ENST00000266546.10_1_12:7310842-7311004:+|nuORF'] 78893 11487 PEVKSRGM-[Oxidation] True NCI_RA007_Epitope_Rep3 918.4593016089399 918.4582099358599 52.298 2 -0.9145059755757475 0.2760645295298761 1.0 ['ENSG00000160818|ENST00000368232|GPATCH4', 'ENST00000473910.5_1_1:156568103-156568838:-|nuORF', 'ENST00000531900.1_1_1:156568015-156568838:-|nuORF', 'ENST00000498756.5_1_1:156566177-156568838:-|nuORF', 'ENST00000506832.6_1_1:156567604-156568838:-|nuORF'] 128674 8137 VSLWWLACP True NCI_RA007_Epitope_Rep4 1073.5368232732098 1073.5357299358602 38.089 2 -0.9145778995114019 0.2760645295298761 1.0 ['ENST00000338560.11_1_17:16318878-16320981:+|nuORF'] 102264 7825 SPTLGRVTPP True H1975_Epitope_Rep2 1023.57129420563 1023.57018993586 35.048 2 -0.9146185838253283 0.2760645295298761 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 79074 13883 PFTINNLTI True PC9_epitope_Rep4 1031.56514619603 1031.56404993586 61.301 2 -0.9146321001433451 0.2760645295298761 1.0 ['nc|ENSG00000155975|Q8NEZ2-3|VPS37A', 'ENSG00000155975|ENST00000324849|VPS37A', 'ENST00000520639.1_1_5:153873211-153873349:+|nuORF'] 73114 7763 NDTLEQKK True H1975_Epitope_Rep3 974.5032742154599 974.50216993586 34.845 2 -0.9146527661659638 0.27607455411543147 1.0 ['nc|ENSG00000068885|Q9P2H3-3|IFT80', 'TRIM59|p.S202Vfs*3|1|0.51|ENSG00000213186|chr3:160438580-160438580|T/-|frameshift_variant', 'ENSG00000213186|ENST00000309784|TRIM59'] 44706 14044 IPPAKIIIPKF True PC9_epitope_Rep5 1235.80056586447 1235.79892490379 59.035 3 -0.9146742691448856 0.27608075549032096 1.0 ['ENSG00000214866|ENST00000399143|DCDC2C'] 24904 17607 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 72.623 2 -0.9147050156569738 0.27608075549032096 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 59091 6387 LGECHLQL True PC9_epitope_Rep4 911.4534875720699 911.45238993586 31.656 2 -0.9147421915373644 0.2760907794347748 1.0 ['ENST00000249014.4_2_22:37962162-37962273:+|nuORF'] 56186 20756 LDPAQRNLYRD True PC9_epitope_Rep2 1359.68951184535 1359.6884099358601 85.28 2 -0.9147985906484093 0.2760969801027402 1.0 ['ENSG00000178150|ENST00000595607|ZNF114', 'ENST00000343776.9_1_1:227751395-227838673:+|nuORF', 'ENST00000608949.5_1_1:227751395-227838673:+|nuORF', 'ZNF678-CHMP1A|1|fusion'] 81500 10715 PQQPSVKATDS True PC9_epitope_Rep4 1156.57241640444 1156.5713099358602 48.969 2 -0.9148009201628926 0.2760969801027402 1.0 ['ENSG00000205038|ENST00000378402|PKHD1L1'] 46086 9247 ISYRAQSIH True PC9_epitope_Rep5 1073.56179215109 1073.5606899358602 40.515 2 -0.914813680801688 0.2761208496026142 1.0 ['nc|ENSG00000103197|P49815-7|TSC2', 'nc|ENSG00000103197|P49815-5|TSC2', 'nc|ENSG00000103197|P49815-3|TSC2', 'nc|ENSG00000103197|P49815-2|TSC2', 'nc|ENSG00000103197|P49815-4|TSC2', 'ENSG00000103197|ENST00000219476|TSC2', 'nc|ENSG00000103197|P49815-6|TSC2', 'TSC2|p.P1508Lfs*15|1|0.22|ENSG00000103197|chr16:2084977-2084978|CC/-|frameshift_variant'] 124955 18987 VLMIRMLR True NCI_RA007_Epitope_Rep2 1030.61436240126 1030.6132699358602 78.707 2 -0.9149119036972452 0.27618243243243246 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 63949 17259 LPYQRRYRERR True NCI_RA007_Epitope_Rep2 1591.88077528603 1591.8796699358602 71.87 2 -0.9149124969673098 0.27618243243243246 1.0 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'nc|ENSG00000179335|P49761-2|CLK3', 'ENST00000454830.6_1_15:74908152-74912599:+|nuORF'] 25652 10405 FEYGCSCY True H1975_Epitope_Rep2 970.32009044402 970.31898993586 45.036 2 -0.9149224585234147 0.27620247556281674 1.0 ['ENST00000269122.7_2_17:57724843-57724882:+|nuORF'] 108684 10069 TELREMLNSRR True H1975_Epitope_Rep1 1403.7303311115097 1403.72922993586 43.671 2 -0.91493322228838 0.27620247556281674 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'ENST00000466474.5_1_21:47766077-47773062:+|nuORF', 'PCNT|p.D659Gfs*18|1|0.23|ENSG00000160299|chr21:46357008-46357009|-/G|frameshift_variant', 'ENST00000490468.5_1_21:47766659-47767371:+|nuORF', 'PCNT|p.G1782Afs*21|1|0.22|ENSG00000160299|chr21:46411414-46411414|G/-|frameshift_variant'] 24902 17315 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 71.484 2 -0.9149433939622483 0.276212496711756 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 130667 18046 VVCVPLLLLP True NCI_RA007_Epitope_Rep5 1064.6667748136 1064.66566993586 76.213 2 -0.914986572081983 0.27626259829438476 1.0 ['nc|ENSG00000164707|Q9UKG4|SLC13A4', 'ENSG00000164707|ENST00000682651|SLC13A4'] 24964 3829 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 21.276 2 -0.9150271511516185 0.27626259829438476 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 58653 12577 LFGVNLDSL True PC9_epitope_Rep5 976.52294703088 976.52184993586 53.377 2 -0.9150932999006248 0.27626259829438476 1.0 ['nc|ENSG00000021461|Q9HB55-4|CYP3A43', 'nc|ENSG00000021461|Q9HB55-3|CYP3A43', 'ENSG00000021461|ENST00000354829|CYP3A43', 'nc|ENSG00000021461|Q9HB55-2|CYP3A43'] 17045 12502 EGNFEVQV True NCI_RA007_Epitope_Rep5 920.4239612655998 920.42286993586 54.746 2 -0.9151604230175001 0.27626259829438476 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 39621 13689 HPLSSARHSP True PC9_epitope_Rep6 1087.55229009655 1087.55118993586 64.44 2 -0.9151717580021279 0.27626259829438476 1.0 ['ENST00000178640.9_1_15:67835333-67835654:+|nuORF'] 14374 4559 DTEKSRFFRFC True NCI_RA007_Epitope_Rep2 1434.6714192530599 1434.67032993586 22.363 2 -0.9152362658924287 0.27627261777857764 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 80810 10450 PLTGLQVLDLS True NCI_RA007_Epitope_Rep2 1154.6546894764201 1154.65358993586 45.242 2 -0.9153346229394359 0.2762964808815793 1.0 ['nc|ENSG00000239732|Q9NR96-4|TLR9', 'nc|ENSG00000239732|Q9NR96-2|TLR9', 'nc|ENSG00000239732|Q9NR96-5|TLR9', 'ENSG00000239732|ENST00000360658|TLR9', 'nc|ENSG00000239732|Q9NR96-3|TLR9'] 37890 9539 HEAVRWHSEQR True H1975_Epitope_Rep2 1433.6912431808498 1433.69014993586 41.663 2 -0.915387902330138 0.27632034332387345 1.0 ['ENSG00000160613|ENST00000320934|PCSK7'] 24900 16740 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 69.24 2 -0.9154130348024906 0.27633036159255775 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 124447 8502 VLERRYSDFAK True H1975_Epitope_Rep3 1382.7306483813397 1382.7295499358602 37.689 2 -0.9154331009545483 0.27634037958386976 1.0 ['ENSG00000167208|ENST00000330943|SNX20'] 24899 16652 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 68.892 2 -0.9154858668044533 0.2763427464008859 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 83944 12331 QELAKRINQE True NCI_RA007_Epitope_Rep2 1227.6571490879098 1227.6560499358602 52.569 2 -0.9154927156107001 0.2763427464008859 1.0 ['ENSG00000131873|ENST00000254190|CHSY1', 'ENST00000543813.1_1_15:101717595-101728206:-|nuORF'] 61503 20406 LLFRWWRRR True PC9_epitope_Rep1 1387.81017654507 1387.8090699358602 83.304 2 -0.915498327316917 0.2763427464008859 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000463462.5_1_7:148982563-148988696:+|nuORF', 'ENST00000426347.5_1_7:148982610-148985528:+|nuORF'] 125953 16288 VPAFLLIG True NCI_RA007_Epitope_Rep5 828.5109257951999 828.50982993586 69.408 2 -0.9155816861547376 0.27634365440779546 1.0 ['ENSG00000109736|ENST00000355443|MFSD10', 'ENST00000514031.5_1_4:2932567-2933551:-|nuORF'] 87757 20825 QVFPMNPPKF True H1975_Epitope_Rep3 1203.6110508426298 1203.6099499358602 86.993 2 -0.9155954040767748 0.27634365440779546 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 24898 16482 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 68.225 2 -0.9156254614748818 0.27634365440779546 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 15790 16082 EDGAFSFV True PC9_epitope_Rep5 870.37594844402 870.37484993586 66.848 2 -0.9156359538698714 0.27634365440779546 1.0 ['ENST00000440760.5_1_2:27594325-27599583:+|nuORF', 'nc|ENSG00000115234|Q15036-2|SNX17', 'ENSG00000115234|ENST00000233575|SNX17'] 33969 17461 GNFKFWDTEL True PC9_epitope_Rep1 1255.5873381925899 1255.58624993586 71.961 2 -0.9156808175484309 0.27634365440779546 1.0 ['ENST00000262394.6_2_17:25639733-25639799:+|nuORF'] 139838 9326 YVDIAIPC[Carbamidomethyl]NNK True H1975_Epitope_Rep1 1305.63872242188 1305.63762993586 40.779 2 -0.9156869917576773 0.27634365440779546 1.0 ['nc|ENSG00000288920|A0A8I5KQE6|RPSA2', 'ENSG00000168028|ENST00000301821|RPSA', 'ENST00000478027.2_1_3:39450050-39453856:+|nuORF', 'ENST00000453374.2_1_1:160236508-160236577:-|nuORF', 'ENST00000437336.1_1_1:154350783-154351305:-|nuORF', 'ENST00000467439.1_1_4:81082717-81082801:+|nuORF', 'ENST00000416785.1_1_6:28699967-28700618:+|nuORF'] 24913 19949 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 81.802 2 -0.9156939350943262 0.27634365440779546 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 100043 25118 SLKLLMYHRI True PC9_epitope_Rep3 1272.7376483380801 1272.73600490379 101.97 3 -0.9157382572761609 0.27635367068984606 1.0 ['ENSG00000077063|ENST00000160373|CTTNBP2'] 78631 17434 PDVLWAFL True PC9_epitope_Rep4 959.5116540711899 959.51054993586 75.054 2 -0.9158028457713582 0.2764052097606887 1.0 ['ENST00000416379.6_2_7:98445757-98445799:-|nuORF'] 111888 11483 TLRRGPPP True PC9_epitope_Rep6 892.5242844435597 892.52318993586 55.242 2 -0.915843197890549 0.2764152249134948 1.0 ['ENSG00000173166|ENST00000319170|RAPH1'] 69016 8243 LVHFERWSHRY True NCI_RA007_Epitope_Rep1 1528.76876522556 1528.76710490379 36.063 3 -0.9158554069969942 0.2764252397890687 1.0 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.V175Sfs*48|1|0.38|ENSG00000129292|chr8:132803834-132803834|G/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 24948 20361 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 84.25 2 -0.9159104822316865 0.27646293528206833 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 18155 20808 EINTYNPEI True PC9_epitope_Rep3 1091.51350454599 1091.5124099358602 85.309 2 -0.9159578201211309 0.2764867894758695 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 36163 15390 GVFGGPYP True PC9_epitope_Rep3 792.3806399016398 792.37954993586 64.353 2 -0.9160096759263816 0.27650681613729156 1.0 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1'] 119270 7812 VELEYSRGLEK True H1975_Epitope_Rep3 1321.6877805098495 1321.6866899358602 35.032 2 -0.9160237700481061 0.27650681613729156 1.0 ['ENSG00000089820|ENST00000350060|ARHGAP4', 'nc|ENSG00000089820|P98171-2|ARHGAP4', 'ENST00000470979.1_1_X:153186583-153187260:-|nuORF', 'ENST00000494302.5_1_X:153178504-153191656:-|nuORF', 'ENST00000470209.5_1_X:153178504-153191656:-|nuORF'] 128074 26475 VRRLPGGG True PC9_epitope_Rep4 810.4824196315798 810.48132993586 112.5 2 -0.9160874731526106 0.27651682905225866 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 71641 9434 MLQMVQLF True PC9_epitope_Rep5 1008.5136453004799 1008.51254993586 41.243 2 -0.9161147592269157 0.27652301475269175 1.0 ['ENSG00000187231|ENST00000428443|SESTD1'] 63153 18310 LNRRPRNQ True H1975_Epitope_Rep3 1052.59515796804 1052.59406993586 76.736 2 -0.9161185628534468 0.27652301475269175 1.0 ['ENSG00000114857|ENST00000232978|NKTR'] 115661 8505 TVKLPVDK True NCI_RA007_Epitope_Rep1 898.5487678558999 898.54766993586 37.082 2 -0.9162086976160027 0.2765539381192229 1.0 ['ENSG00000130988|ENST00000397180|RGN', 'nc|ENSG00000130988|Q15493-2|RGN'] 128163 23543 VRSKGRKF True PC9_epitope_Rep6 976.5930327097199 976.5924849679301 103.7 1 -0.9162411822444425 0.2765539381192229 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 140378 8740 YYELWWFWLLW True NCI_RA007_Epitope_Rep1 1703.8176724805896 1703.81602490379 37.999 3 -0.9162634073713277 0.2765539381192229 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 36018 16178 GVDFEGTF True PC9_epitope_Rep5 870.37594844402 870.37484993586 67.218 2 -0.9162794791475556 0.2765539381192229 1.0 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 65380 6711 LSEQQYNR True NCI_RA007_Epitope_Rep3 1036.49377216092 1036.49266993586 33.483 2 -0.9163113275668733 0.2765539381192229 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'ENST00000493587.1_1_8:100883622-100887891:+|nuORF'] 44066 16729 ILLLFWIIFY True NCI_RA007_Epitope_Rep2 1339.79441785487 1339.7933299358601 69.803 2 -0.9163248803395913 0.2765539381192229 1.0 ['ENST00000374024.3_1_1:27721873-27722296:+|nuORF'] 44124 21611 ILNRFRNYFRH True NCI_RA007_Epitope_Rep1 1534.82694880802 1534.82584993586 88.441 2 -0.9163488577345015 0.2765539381192229 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14'] 24949 20445 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 84.599 2 -0.9163554576077121 0.2765539381192229 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 122327 9025 VGRWIRTQQH True PC9_epitope_Rep4 1279.68978662887 1279.68868993586 42.288 2 -0.9163684548766152 0.2765539381192229 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM', 'nc|ENSG00000100504|P06737-2|PYGL', 'ENSG00000100504|ENST00000216392|PYGL', 'ENST00000530336.2_1_14:51390668-51411121:-|nuORF'] 128158 25135 VRSKGRKF True NCI_RA007_Epitope_Rep5 976.5930327097199 976.5924849679301 104.18 1 -0.9163818319261013 0.2765539381192229 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 60470 14243 LILQYDIRQK True PC9_epitope_Rep4 1288.7503211967598 1288.74922993586 62.691 2 -0.9164356301898275 0.2765916229642032 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1', 'ENST00000480125.1_1_X:24766454-24793337:+|nuORF'] 68535 5958 LTVWCSLP True PC9_epitope_Rep2 917.46807500705 917.46696993586 28.306 2 -0.9164537698094475 0.2766201782057668 1.0 ['ENST00000216044.9_1_22:39128202-39128355:+|nuORF', 'ENST00000544928.1_22:39128030-39128449:+|nuORF'] 93175 20226 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 83.82 2 -0.9164539760699427 0.2766201782057668 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 121661 18905 VGLIQQQKTFR True NCI_RA007_Epitope_Rep3 1316.75646920636 1316.75587496793 82.651 1 -0.9164656317982315 0.2766201782057668 1.0 ['ENST00000506227.2_1_4:83501272-83501506:-|nuORF'] 60441 15571 LILEHDTP True H1975_Epitope_Rep2 936.4916469026 936.49054993586 65.05 2 -0.916483196074078 0.2766201782057668 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2'] 33301 17579 GLAVIELRAP True PC9_epitope_Rep6 1037.6233297784897 1037.62222993586 80.257 2 -0.9165333283387523 0.2766201782057668 1.0 ['ENST00000454838.6_1_11:869018-869621:-|nuORF'] 101 7441 AAASGAKCVLT True H1975_Epitope_Rep2 990.5168161046199 990.51570993586 33.567 2 -0.9165385707743923 0.2766201782057668 1.0 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588863.1_1_18:11999160-12009987:+|nuORF'] 23366 8552 EVTRQVAQCK True NCI_RA007_Epitope_Rep2 1160.59719168364 1160.5960899358602 37.908 2 -0.916543548786572 0.2766201782057668 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 67978 13870 LTLQRQGFTM True H1975_Epitope_Rep1 1193.62267815549 1193.6215899358601 58.5 2 -0.9165730959053621 0.2766263593347907 1.0 ['ENST00000566975.5_1_16:57824936-57828961:-|nuORF'] 131543 23713 VVVIRQER True H1975_Epitope_Rep3 997.60326304025 997.60216993586 98.895 2 -0.9165879605406199 0.2766263593347907 1.0 ['ENSG00000070886|ENST00000166244|EPHA8'] 64757 27202 LRRRRFKMRRM True PC9_epitope_Rep3 1604.9456415553998 1604.9440049037898 111.94 3 -0.9166084811892469 0.27666403796400063 1.0 ['ENSG00000023171|ENST00000635736|GRAMD1B'] 26963 8025 FLIWWHWYNHT True NCI_RA007_Epitope_Rep1 1601.75680355953 1601.7551549037898 35.211 3 -0.9166130440637891 0.27667404537908136 1.0 ['ENST00000304661.5_1_X:119759908-119760061:-|nuORF'] 42996 13529 IGEHYVHVN True PC9_epitope_Rep5 1066.5195929859399 1066.51848993586 57.061 2 -0.916635972349015 0.276684052517259 1.0 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET'] 57349 10940 LEHDVEEAP True PC9_epitope_Rep2 1037.4665543535698 1037.46544993586 47.4 2 -0.9166541456440507 0.27669405937854513 1.0 ['IGSF1|p.G1198V|1|0.42|ENSG00000147255|chrX:131274757-131274757|C/A|missense_variant'] 24857 1693 FDDGDCCD True H1975_Epitope_Rep2 888.226583982 888.22548993586 9.1246 2 -0.91668142139221 0.2766964100435775 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 126248 9284 VPGYTANG True PC9_epitope_Rep3 777.36571811349 777.36516496793 40.652 1 -0.9166972847423415 0.2766964100435775 1.0 ['ENSG00000137975|ENST00000370565|CLCA2'] 114558 5721 TSIWSCFQEHR True PC9_epitope_Rep1 1392.62446906064 1392.6233699358602 26.825 2 -0.9167474812163533 0.2766964100435775 1.0 ['ENST00000174618.4_1_17:2289113-2289266:-|nuORF'] 87565 5687 QTMFRLFP True NCI_RA007_Epitope_Rep5 1038.5320722459398 1038.5309699358602 28.563 2 -0.9168482344888472 0.27674408953200436 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1', 'nc|ENSG00000107147|Q5JUK3-4|KCNT1', 'ENSG00000107147|ENST00000371757|KCNT1', 'nc|ENSG00000107147|Q5JUK3-2|KCNT1'] 133749 69 WLLLKLLLLLL True PC9_epitope_Rep3 1349.9414164417299 1349.93977490379 0.38314 3 -0.9168563663131859 0.27674408953200436 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 61189 15701 LLDNIHFSGVK True NCI_RA007_Epitope_Rep1 1241.67682190333 1241.67572993586 65.166 2 -0.9169010481574532 0.27679263029766515 1.0 ['ENSG00000115594|ENST00000410023|IL1R1'] 99739 15310 SLGISYDDPKK True PC9_epitope_Rep1 1221.62411762413 1221.6230299358601 63.711 2 -0.9169777888103638 0.27679263029766515 1.0 ['ENSG00000197140|ENST00000379907|ADAM32'] 15622 13719 EAVSAHLEI True PC9_epitope_Rep5 967.49746055903 967.49636993586 57.797 2 -0.9169807436135691 0.27679263029766515 1.0 ['ENST00000565125.5_1_11:68658919-68659369:-|nuORF'] 22029 9762 ESQQEGAVAP True H1975_Epitope_Rep1 1014.4618033262997 1014.46070993586 42.479 2 -0.9169825391003131 0.27679263029766515 1.0 ['ENSG00000161328|ENST00000270115|LRRC56'] 6972 21474 AQPIFGAIA True PC9_epitope_Rep5 886.4912529797798 886.49014993586 87.634 2 -0.9170209991646592 0.27679263029766515 1.0 ['ENST00000361716.7_1_12:6572127-6572325:-|nuORF'] 24914 20219 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 82.854 2 -0.9170352362277906 0.27679263029766515 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 15904 8522 EDREIKLV True H1975_Epitope_Rep2 1000.5553097883198 1000.55420993586 37.735 2 -0.917084766244921 0.27679263029766515 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 117651 20702 VAINIPRLLL True PC9_epitope_Rep4 1120.73321458064 1120.73210993586 87.791 2 -0.9170982918243198 0.27679263029766515 1.0 ['nc|ENSG00000147874|Q7Z4H7-2|HAUS6', 'nc|ENSG00000147874|Q7Z4H7-3|HAUS6', 'ENSG00000147874|ENST00000380502|HAUS6'] 25648 9895 FEWWYFRKYRT True H1975_Epitope_Rep1 1680.8201320920796 1680.81902993586 42.996 2 -0.9171582075656594 0.27679263029766515 1.0 ['ST7|p.G89R|1|0.55|ENSG00000004866|chr7:117119591-117119591|G/A|missense_variant'] 46093 11195 ISYVYMKRKYE True H1975_Epitope_Rep1 1478.7591716282998 1478.75806993586 48.03 2 -0.9171801202081451 0.27680263358092316 1.0 ['ENSG00000187754|ENST00000298181|SSX7'] 3678 18715 AGRRSRAQPV True NCI_RA007_Epitope_Rep1 1096.62137271588 1096.62077496793 76.938 1 -0.9172285075270208 0.27682646822872004 1.0 ['ENST00000417536.5_1_22:38035396-38035618:+|nuORF'] 43761 11379 IIYCRSPDFRK True H1975_Epitope_Rep3 1396.7285402063596 1396.72744993586 48.881 2 -0.9172879183129617 0.27683881497054025 1.0 ['ENSG00000043591|ENST00000369295|ADRB1'] 11413 23644 DFLLRQRRRSS True PC9_epitope_Rep4 1432.801127983 1432.79947490379 99.29 3 -0.9173472170968925 0.27683881497054025 1.0 ['ENSG00000237441|ENST00000497454|RGL2', 'ENST00000483151.5_1_6:33259881-33261471:-|nuORF'] 70597 4265 LYYYRDRDWRW True H1975_Epitope_Rep3 1690.8004592766597 1690.7988149037901 21.523 3 -0.9173553181670248 0.27683881497054025 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 119640 6363 VESETHLGT True NCI_RA007_Epitope_Rep3 971.4559896698698 971.45488993586 32.03 2 -0.9173655665294304 0.27683881497054025 1.0 ['nc|ENSG00000082269|Q9P2D6-3|FAM135A', 'nc|ENSG00000082269|Q9P2D6-2|FAM135A', 'nc|ENSG00000082269|Q9P2D6-4|FAM135A', 'ENSG00000082269|ENST00000418814|FAM135A'] 68030 10517 LTNEDVKLDW True H1975_Epitope_Rep3 1231.60846755999 1231.60736993586 45.518 2 -0.9173918006034861 0.27685733252198924 1.0 ['GUCY2F|p.Q638E|1|0.19|ENSG00000101890|chrX:109409048-109409048|G/C|missense_variant'] 40551 9661 HSRWSWRRKRQ True NCI_RA007_Epitope_Rep1 1581.85014386409 1581.84850490379 41.576 3 -0.9174154876280293 0.27685733252198924 1.0 ['ENST00000496846.1_1_7:30411132-30411270:+|nuORF'] 123618 17218 VILDYVKYR True PC9_epitope_Rep4 1167.66519459047 1167.6640899358601 74.237 2 -0.9174604051047327 0.27685733252198924 1.0 ['ENST00000588736.1_1_17:74041371-74044231:-|nuORF'] 52193 5934 KMIYLARNAK True NCI_RA007_Epitope_Rep5 1206.6906981456598 1206.68905490379 29.51 3 -0.9174682891909006 0.27685733252198924 1.0 ['ENSG00000173597|ENST00000310613|SULT1B1'] 13585 12149 DPQAWPSRY True NCI_RA007_Epitope_Rep3 1118.5145076055 1118.5134099358602 54.904 2 -0.9174709288729491 0.27685733252198924 1.0 ['ENSG00000182636|ENST00000649030|NDN', 'NDN|p.K284N|1|0.31|ENSG00000182636|chr15:23686366-23686366|C/G|missense_variant'] 79332 22670 PGKREPLRSVL True PC9_epitope_Rep4 1250.7459045226599 1250.74480993586 95.43 2 -0.9174764735890227 0.27685733252198924 1.0 ['ENSG00000182170|ENST00000332314|MRGPRG'] 91888 25356 RPPGGGGG True H1975_Epitope_Rep3 653.32452200785 653.3239749679301 105.46 1 -0.917512514247479 0.2768811627874815 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 5515 9590 ANASKWSP True H1975_Epitope_Rep2 859.41881631551 859.41770993586 41.863 2 -0.9175420058852954 0.27691499218652765 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-3|ZFYVE19', 'ENST00000560078.1_1_15:41101513-41102320:+|nuORF', 'ENST00000439365.6_2_19:47543749-47548643:+|nuORF'] 65660 5702 LSGVHLLPV True NCI_RA007_Epitope_Rep3 933.5647522732099 933.56364993586 29.405 2 -0.9175462236764604 0.27691499218652765 1.0 ['ENST00000587885.1_1_19:13263929-13264031:+|nuORF'] 58207 9933 LESRDQAW True PC9_epitope_Rep1 1003.4723084403498 1003.47120993586 43.069 2 -0.917608104036831 0.27692116217001095 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 129629 13847 VTHDQARKRLT True PC9_epitope_Rep1 1323.73713074411 1323.7360299358602 58.104 2 -0.9176564089143011 0.27692116217001095 1.0 ['ENSG00000213977|ENST00000225525|TAX1BP3'] 91887 25531 RPPGGGGG True H1975_Epitope_Rep1 653.32452200785 653.3239749679301 105.81 1 -0.9176782540506857 0.27692733181221046 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 87097 5379 QSEREQEI True PC9_epitope_Rep6 1017.4727023631698 1017.47160993586 28.564 2 -0.917692773611697 0.27692733181221046 1.0 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2'] 66142 13828 LSPDLSHTTL True PC9_epitope_Rep2 1082.56078909158 1082.5596899358602 58.474 2 -0.9177231505395615 0.27694434842723814 1.0 ['ENSG00000198734|ENST00000367797|F5'] 64787 16070 LRTLLLKHS True PC9_epitope_Rep1 1079.68151336095 1079.68040993586 66.628 2 -0.9177387116571736 0.27694434842723814 1.0 ['nc|ENSG00000114923|P48751-2|SLC4A3', 'SLC4A3|p.A1138Qfs*10|1|0.11|ENSG00000114923|chr2:219640563-219640563|G/-|frameshift_variant', 'ENSG00000114923|ENST00000358055|SLC4A3', 'nc|ENSG00000114923|P48751-3|SLC4A3'] 91886 25447 RPPGGGGG True H1975_Epitope_Rep1 653.32452200785 653.3239749679301 105.43 1 -0.9177577832482313 0.27694434842723814 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 100072 7382 SLKQQEPGLM True H1975_Epitope_Rep2 1129.58014463717 1129.5784949037902 33.335 3 -0.917782370470802 0.27694434842723814 1.0 ['nc|ENSG00000167566|Q9HCH0-2|NCKAP5L', 'ENSG00000167566|ENST00000335999|NCKAP5L'] 24895 13842 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 57.861 2 -0.917794515694254 0.27694434842723814 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 93170 19682 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 81.669 2 -0.9178653603490593 0.27694434842723814 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 82247 9983 PTKVEVKPVP True H1975_Epitope_Rep3 1092.6542955536 1092.6531899358602 43.435 2 -0.9178804789963717 0.27694434842723814 1.0 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 27479 9452 FNYYYLIE True PC9_epitope_Rep4 1123.52261267771 1123.52095490379 43.967 3 -0.9178867623073091 0.27694434842723814 1.0 ['SPATA17|p.K118I|1|0.19|ENSG00000162814|chr1:217683319-217683319|A/T|missense_variant'] 120014 14863 VFDIKAVSI True PC9_epitope_Rep4 990.57498260374 990.57388993586 65.108 2 -0.9179158609454452 0.27694434842723814 1.0 ['nc|ENSG00000149177|Q12913-3|PTPRJ', 'ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 57626 15393 LELRKNHL True PC9_epitope_Rep3 1021.6032630402501 1021.60216993586 64.364 2 -0.9179391877422046 0.27694434842723814 1.0 ['ENST00000524575.5_2_11:101983367-101983394:+|nuORF'] 14370 8668 DTEKLKMYHSL True H1975_Epitope_Rep3 1363.68058695443 1363.6794899358601 38.34 2 -0.9181488148236715 0.277037303321074 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 91340 15608 RMKWWLFWDQR True H1975_Epitope_Rep1 1650.8241719266998 1650.82306993586 65.32 2 -0.9182092336612722 0.2770396383193463 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF'] 58430 9074 LEWDHIEMNFR True PC9_epitope_Rep2 1488.6819839367597 1488.68032490379 40.247 3 -0.918212182575663 0.2770396383193463 1.0 ['ENSG00000153012|ENST00000382114|LGI2'] 12886 21898 DLLPLSLIPV True PC9_epitope_Rep6 1078.66379760814 1078.66327496793 97.132 1 -0.9182431801791869 0.2770396383193463 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2', 'PAN2|p.R449Qfs*16|1|0.09|ENSG00000135473|chr12:56326327-56326328|-/G|frameshift_variant'] 372 23029 AALAWRRAPE True H1975_Epitope_Rep3 1139.6199757335498 1139.6188699358602 96.189 2 -0.9184891465266144 0.27709111018940963 1.0 ['ENST00000295878.7_1_3:113729745-113729820:-|nuORF'] 15858 16827 EDLRRRLKYFF True H1975_Epitope_Rep1 1541.84668119309 1541.8450349037903 70.134 3 -0.9185503000721957 0.2771011046439286 1.0 ['ENST00000596390.1_1_19:7587636-7590109:+|nuORF', 'ENST00000394321.9_1_19:7587636-7592563:+|nuORF', 'MCOLN1|p.H280Tfs*92|1|0.17|ENSG00000090674|chr19:7528216-7528216|C/-|frameshift_variant', 'ENSG00000090674|ENST00000264079|MCOLN1'] 59190 13765 LGFQKRWRK True PC9_epitope_Rep5 1217.71454482473 1217.7134499358601 57.969 2 -0.9185880283001094 0.2771110988220981 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 82734 15344 PVPTTVPV True PC9_epitope_Rep2 808.4694549060399 808.46834993586 64.3 2 -0.918787984235174 0.277204042414942 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2', 'nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 112252 11353 TLYLQGLCWKR True NCI_RA007_Epitope_Rep2 1379.73837661407 1379.73726993586 48.751 2 -0.9188174848995257 0.2772140348936876 1.0 ['ENST00000383801.6_1_3:10360838-10360919:-|nuORF'] 78928 13159 PFEIVWGMRRP True PC9_epitope_Rep5 1386.7230609030998 1386.7219699358602 55.62 2 -0.9188447337399587 0.2772378516624041 1.0 ['ENST00000488457.1_1_2:25600201-25602432:-|nuORF'] 124957 19284 VLMIRMLR True NCI_RA007_Epitope_Rep5 1030.61436240126 1030.6132699358602 81.046 2 -0.9189663026838526 0.27724784339747843 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 73585 6797 NGEAAGTRIW True NCI_RA007_Epitope_Rep1 1073.52540664237 1073.5243099358602 30.445 2 -0.9190276674658674 0.2772578348562976 1.0 ['ENST00000585553.5_1_17:43213511-43213673:+|nuORF'] 30295 9641 GAAQVRIKIL True PC9_epitope_Rep4 1067.6815133609498 1067.68040993586 44.708 2 -0.9191522096646004 0.27741222007188276 1.0 ['ENSG00000125755|ENST00000245934|SYMPK', 'nc|ENSG00000125755|Q92797-2|SYMPK'] 83818 7227 QEETKTVL True PC9_epitope_Rep3 946.4971262058599 946.49602993586 32.811 2 -0.9191614770516564 0.27741222007188276 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 57793 7832 LEPGDLLYFP True H1975_Epitope_Rep1 1162.5910265907 1162.58992993586 35.077 2 -0.9191721222745761 0.27741222007188276 1.0 ['RIOX1|p.V390L|1|0.43|ENSG00000170468|chr14:73492185-73492185|G/T|missense_variant', 'nc|ENSG00000170468|Q9H6W3-2|RIOX1', 'ENSG00000170468|ENST00000304061|RIOX1'] 22685 11081 ETTRPVPAP True NCI_RA007_Epitope_Rep5 966.5134449763398 966.51234993586 49.257 2 -0.9192277153935591 0.2774145390708154 1.0 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 24855 19024 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 79.306 2 -0.9192969480164569 0.2774145390708154 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 37169 17979 GVTLSVIVSP True PC9_epitope_Rep3 970.5698972233 970.56880993586 74.36 2 -0.9193290703496384 0.2774145390708154 1.0 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A', 'nc|ENSG00000034677|Q9NV58-2|RNF19A'] 110360 14683 TILLMNFRLVR True NCI_RA007_Epitope_Rep5 1374.81696128794 1374.81532490379 63.148 3 -0.9194158737608042 0.2774576060367345 1.0 ['ENST00000470347.1_1_7:105733423-105733495:-|nuORF'] 125741 6772 VNFRNVKAV True PC9_epitope_Rep2 1045.6032630402499 1045.60216993586 31.455 2 -0.91947532149764 0.2774576060367345 1.0 ['ENSG00000133597|ENST00000072869|ADCK2'] 130812 3893 VVEYECRPGYR True NCI_RA007_Epitope_Rep5 1369.6448701520499 1369.64323490379 21.259 3 -0.9194773022234422 0.2774576060367345 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF', 'nc|ENSG00000196352|P08174-4|CD55', 'ENSG00000196352|ENST00000367064|CD55', 'nc|ENSG00000196352|P08174-3|CD55', 'nc|ENSG00000196352|P08174-5|CD55', 'nc|ENSG00000196352|P08174-2|CD55', 'nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 96062 14392 SEAQVPHHCP True PC9_epitope_Rep1 1103.48182757823 1103.4807299358602 60.183 2 -0.9194918214508289 0.2774576060367345 1.0 ['ENST00000582314.5_1_17:17997264-18003464:+|nuORF'] 93176 20415 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 84.591 2 -0.9194958871680436 0.2774576060367345 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 41468 20007 IAYEFNPELV True PC9_epitope_Rep4 1193.59684024713 1193.59574993586 85.091 2 -0.9195400849165575 0.2774576060367345 1.0 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 35849 6196 GVAALGLAAV True PC9_epitope_Rep2 840.5069030439199 840.50580993586 29.226 2 -0.9195917936221404 0.2774576060367345 1.0 ['nc|ENSG00000117791|Q969Z3-2|MTARC2', 'ENSG00000117791|ENST00000366913|MTARC2'] 45262 19258 IRWMHFLILML True PC9_epitope_Rep3 1471.81960414023 1471.81795490379 79.297 3 -0.9196068276991561 0.2774576060367345 1.0 ['ENST00000393346.7_1_11:85723404-85725959:-|nuORF'] 111451 6327 TLKWEQSFQKG True H1975_Epitope_Rep1 1350.6932002434598 1350.6915449037901 29.402 3 -0.9196241809406764 0.2774576060367345 1.0 ['ENST00000469070.1_1_3:119814129-119817604:+|nuORF'] 91893 21495 RPPGGGGG True PC9_epitope_Rep6 653.32452200785 653.3239749679301 95.554 1 -0.9197022045331213 0.2774576060367345 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 121044 20426 VGFLIRFQAFL True PC9_epitope_Rep6 1309.75467830121 1309.7535899358602 91.272 2 -0.9197358387545184 0.2774576060367345 1.0 ['chr3:120689888-120694153|163|10.13|0.58|4.14|-|1|RABL3,RABL3|1'] 118573 5322 VEAARRYVQFM True H1975_Epitope_Rep3 1368.6972400780799 1368.6961499358601 25.546 2 -0.9197574612109527 0.2774576060367345 1.0 ['ENSG00000115850|ENST00000264162|LCT'] 443 20771 AALRERYLR True H1975_Epitope_Rep3 1146.6621748987 1146.66106993586 86.784 2 -0.9197594269665642 0.2774576060367345 1.0 ['ENSG00000142252|ENST00000270257|GEMIN7'] 59093 5672 LGEDRHSCL True PC9_epitope_Rep4 1028.47092854136 1028.4698299358602 28.625 2 -0.9197602982184937 0.2774576060367345 1.0 ['LTR1_dup85|chr7:101629186-101629993:-|1.961039395768969|0.0003248618387484|12.56|495.0|9|2|sense'] 110968 12512 TLDASQSS True H1975_Epitope_Rep1 807.3610266558701 807.36047496793 53.168 1 -0.9197682603264689 0.2774675916968407 1.0 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113943320-113958989:+|nuORF', 'ENST00000409656.5_1_2:113943320-113958989:+|nuORF'] 93459 6307 RSEAGAWRL True NCI_RA007_Epitope_Rep5 1044.54647644012 1044.5453699358602 30.938 2 -0.9198367160798002 0.2774684663525966 1.0 ['nc|ENSG00000165915|Q96H72-2|SLC39A13', 'ENSG00000165915|ENST00000362021|SLC39A13'] 111367 18112 TLINKINNL True PC9_epitope_Rep6 1041.6182443980501 1041.6171499358602 82.303 2 -0.9198538182418403 0.2774684663525966 1.0 ['ENSG00000241127|ENST00000223273|YAE1'] 79601 19517 PGVTGLAAAAL True PC9_epitope_Rep2 939.5389314481898 939.53782993586 80.456 2 -0.919859041180136 0.2774684663525966 1.0 ['ENST00000316418.9_1_5:424040-432966:+|nuORF'] 56027 12854 LDKHSELF True PC9_epitope_Rep1 987.5025459394699 987.50144993586 54.317 2 -0.9199539358255904 0.2774684663525966 1.0 ['SPATA7|p.N454Kfs*2|1|0.36|ENSG00000042317|chr14:88437977-88437978|-/A|frameshift_variant', 'nc|ENSG00000042317|Q9P0W8-3|SPATA7', 'ENST00000556666.5_1_14:88883017-88904763:+|nuORF', 'SPATA7|p.E535Kfs*4|1|0.13|ENSG00000042317|chr14:88438223-88438223|G/-|frameshift_variant', 'nc|ENSG00000042317|Q9P0W8-2|SPATA7', 'ENSG00000042317|ENST00000393545|SPATA7', 'SPATA7|p.D267Gfs*10|1|0.38|ENSG00000042317|chr14:88426650-88426651|-/A|frameshift_variant', 'ENST00000553626.5_1_14:88852162-88894100:+|nuORF'] 32483 6711 GGLFPPPV True H1975_Epitope_Rep3 782.4326754744999 782.43156993586 30.769 2 -0.9199615526738805 0.2774684663525966 1.0 ['ENSG00000178951|ENST00000322357|ZBTB7A'] 13065 9592 DLRNSLTGFR True PC9_epitope_Rep5 1177.62036965637 1177.61926993586 41.856 2 -0.9199714068319306 0.2774684663525966 1.0 ['nc|ENSG00000102935|Q2M1K9-2|ZNF423', 'nc|ENSG00000102935|Q2M1K9|ZNF423', 'ENSG00000102935|ENST00000563137|ZNF423', 'ZNF521|p.L1033Wfs*49|1|0.18|ENSG00000198795|chr18:25224820-25224820|A/-|frameshift_variant', 'ENSG00000198795|ENST00000361524|ZNF521'] 59304 7343 LGHIMLNKSR True NCI_RA007_Epitope_Rep1 1167.65464699011 1167.65299490379 32.557 3 -0.9199875533540871 0.2774684663525966 1.0 ['ENST00000498126.5_1_1:224622786-224703543:+|nuORF'] 24858 17461 FDDGDCCD True H1975_Epitope_Rep2 888.226583982 888.22548993586 72.456 2 -0.9200114028308959 0.2774684663525966 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 24581 20450 FALSGPLFL True H1975_Epitope_Rep3 963.5429541994699 963.5424049679301 85.496 1 -0.9200691122078285 0.2774684663525966 1.0 ['nc|ENSG00000180638|Q86VL8-5|SLC47A2', 'ENSG00000180638|ENST00000433844|SLC47A2', 'nc|ENSG00000180638|Q86VL8-4|SLC47A2', 'nc|ENSG00000180638|Q86VL8|SLC47A2', 'nc|ENSG00000180638|Q86VL8-6|SLC47A2'] 93180 20762 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 85.971 2 -0.9200949018070976 0.2774684663525966 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 57937 8045 LEQNIQLP True NCI_RA007_Epitope_Rep1 953.51819600361 953.51708993586 35.291 2 -0.9201205681311373 0.2774684663525966 1.0 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 61476 21102 LLFKLFKV True PC9_epitope_Rep2 1006.6579243820598 1006.65682993586 86.627 2 -0.9201713001074165 0.2774684663525966 1.0 ['ENST00000361830.7_2_20:57253146-57253287:+|nuORF'] 120966 16883 VGERAKRRSP True PC9_epitope_Rep6 1154.6632375278598 1154.66214993586 77.457 2 -0.9201800461547353 0.2774684663525966 1.0 ['ENST00000262096.12_1_8:17014207-17053083:+|nuORF'] 60839 17398 LKKYCNPKKI True PC9_epitope_Rep4 1233.7267493012098 1233.72511490379 74.916 3 -0.9201838901509845 0.2774684663525966 1.0 ['nc|ENSG00000168297|Q7Z7A4-5|PXK', 'nc|ENSG00000168297|Q7Z7A4-7|PXK', 'nc|ENSG00000168297|Q7Z7A4-2|PXK', 'nc|ENSG00000168297|Q7Z7A4-6|PXK', 'nc|ENSG00000168297|Q7Z7A4-4|PXK', 'ENSG00000168297|ENST00000356151|PXK', 'nc|ENSG00000168297|Q7Z7A4-3|PXK'] 137031 18405 YKRHPVRPIIH True NCI_RA007_Epitope_Rep4 1414.8309715593 1414.8298699358602 79.646 2 -0.9202279226861009 0.2774684663525966 1.0 ['nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 38485 11231 HHARREPL True PC9_epitope_Rep6 1014.5471451464599 1014.54604993586 54.198 2 -0.9202489657983212 0.2774684663525966 1.0 ['ENSG00000178015|ENST00000380007|GPR150'] 66400 8916 LSRFLEYRLDW True H1975_Epitope_Rep1 1496.7775985737599 1496.77650993586 39.199 2 -0.9202543254537324 0.2774684663525966 1.0 ['ENST00000554360.5_1_14:58733385-58733508:-|nuORF'] 133751 375 WLLLKLLLLLL True PC9_epitope_Rep3 1349.9414164417299 1349.93977490379 2.0813 3 -0.9202595269675778 0.2774684663525966 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 124958 19466 VLMIRMLR True NCI_RA007_Epitope_Rep5 1030.61436240126 1030.6132699358602 81.764 2 -0.9203071141692621 0.2774684663525966 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 119758 13009 VETQANNLIC True H1975_Epitope_Rep1 1103.52810906431 1103.52757496793 55.122 1 -0.9203136376341018 0.2774684663525966 1.0 ['ENSG00000171940|ENST00000371471|ZNF217'] 16359 11317 EELALHRRR True H1975_Epitope_Rep1 1178.66323752786 1178.66214993586 48.508 2 -0.9203283520829628 0.2774684663525966 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33'] 132356 14888 VYMDWYEKF True NCI_RA007_Epitope_Rep3 1279.5583465634297 1279.55724993586 65.993 2 -0.9203406682891034 0.2774684663525966 1.0 ['SNRNP200|p.Y2107Lfs*4|1|0.11|ENSG00000144028|chr2:96275104-96275105|AC/-|frameshift_variant', 'ENSG00000144028|ENST00000323853|SNRNP200', 'ENST00000497539.5_1_2:96940752-96950410:-|nuORF', 'ENST00000480242.1_1_2:96950056-96950410:-|nuORF'] 41339 6373 IALIGSGW True PC9_epitope_Rep4 815.45413919507 815.45304993586 31.598 2 -0.9203490763218339 0.2774684663525966 1.0 ['SS18L1-GPR108|1|fusion', 'ENSG00000125734|ENST00000264080|GPR108'] 40313 4699 HRRPAGRHLRP True PC9_epitope_Rep1 1351.7810016751098 1351.77934490379 22.946 3 -0.9203567362121777 0.2774684663525966 1.0 ['ENST00000458024.5_1_X:100913490-100914433:-|nuORF'] 104494 7367 SSPGPPVQP True H1975_Epitope_Rep2 864.43413202648 864.43302993586 33.277 2 -0.9203646794034809 0.2774684663525966 1.0 ['ENST00000524751.5_1_11:126143220-126144854:+|nuORF'] 20070 7476 ENFLETIGVKD True NCI_RA007_Epitope_Rep2 1263.63468230783 1263.63358993586 33.708 2 -0.9203824128729166 0.27747461490640324 1.0 ['ENST00000481194.1_1_7:45113793-45115653:+|nuORF', 'nc|ENSG00000136280|Q9BSQ5-3|CCM2', 'nc|ENSG00000136280|Q9BSQ5-4|CCM2', 'ENSG00000136280|ENST00000258781|CCM2', 'nc|ENSG00000136280|Q9BSQ5-2|CCM2', 'ENST00000461377.5_1_7:45039147-45115653:+|nuORF'] 54858 20456 LAGEWAVGTKF True PC9_epitope_Rep2 1177.6131590176099 1177.61206993586 84.113 2 -0.9203993344425269 0.27747461490640324 1.0 ['ENST00000591360.1_1_18:56203804-56204053:+|nuORF'] 44519 12129 IPAFAPTPVP True H1975_Epitope_Rep1 1008.5644179200399 1008.56332993586 51.67 2 -0.920443542157243 0.27749074432226334 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 10747 6800 CWWRYWWHYPI True NCI_RA007_Epitope_Rep2 1694.76050904098 1694.75940993586 31.066 2 -0.9204531728115671 0.27749074432226334 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 110262 9186 TIFLYDSTV True H1975_Epitope_Rep2 1057.53317736141 1057.53208993586 40.287 2 -0.9204561857713258 0.27749074432226334 1.0 ['ENST00000426799.1_1_X:65041564-65042074:-|nuORF'] 87933 4737 QVPNFHKCEIC True H1975_Epitope_Rep3 1316.6005628119199 1316.59891490379 23.346 3 -0.920458968056198 0.2774930585293752 1.0 ['ZNF236|p.C1724Wfs*46|1|0.31|ENSG00000130856|chr18:76959752-76959752|T/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'ZNF236|p.K993Sfs*28|1|0.16|ENSG00000130856|chr18:76913818-76913818|A/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36-2|ZNF236', 'ZNF236|p.M461Nfs*104|1|0.37|ENSG00000130856|chr18:76881473-76881474|-/A|frameshift_variant'] 61608 17184 LLGRYVVER True PC9_epitope_Rep5 1103.6451278522297 1103.64402993586 71.119 2 -0.9204907362113275 0.2774930585293752 1.0 ['ENSG00000188760|ENST00000373883|TMEM198'] 116443 6126 TWWPQLWHCAQ True H1975_Epitope_Rep1 1454.6553752661 1454.6542699358602 28.633 2 -0.9205099181655086 0.2774930585293752 1.0 ['ENST00000561704.1_1_16:66914448-66914508:+|nuORF'] 81350 25548 PPRRGGVLLG True PC9_epitope_Rep3 1020.6192474575597 1020.61867496793 103.75 1 -0.9205475021572513 0.27749920572431036 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 131309 22227 VVQSVKHTKR True PC9_epitope_Rep6 1180.70403971068 1180.70294993586 98.453 2 -0.9205766756627938 0.27749920572431036 1.0 ['ENSG00000184304|ENST00000331968|PRKD1'] 10944 14823 DAWKRPDAL True PC9_epitope_Rep5 1070.55089311422 1070.5497899358602 62.016 2 -0.9206700228885146 0.27752147849388104 1.0 ['ENSG00000104953|ENST00000246112|TLE6', 'ENST00000497878.5_1_19:2988043-2994999:+|nuORF', 'nc|ENSG00000104953|Q9H808-2|TLE6'] 100239 12865 SLLPHQDSVP True PC9_epitope_Rep6 1091.5611234447501 1091.56002993586 61.003 2 -0.920710636223803 0.27752147849388104 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant'] 30275 6931 GAALKEIV True NCI_RA007_Epitope_Rep3 799.4803539429099 799.47924993586 34.37 2 -0.9207170468712611 0.27752147849388104 1.0 ['ENSG00000100445|ENST00000399395|SDR39U1', 'nc|ENSG00000100445|Q9NRG7-3|SDR39U1'] 127815 21146 VRLIHLRLK True PC9_epitope_Rep3 1146.7713314248601 1146.76969490379 86.624 3 -0.9207231395572743 0.27752147849388104 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 85560 14694 QLLHHRRSRYQ True H1975_Epitope_Rep1 1492.81236137304 1492.81126993586 61.738 2 -0.9207436790106851 0.27752147849388104 1.0 ['ENSG00000116649|ENST00000376957|SRM'] 124951 18381 VLMIRMLR True H1975_Epitope_Rep1 1030.61436240126 1030.6132699358602 76.603 2 -0.9207567751536675 0.2775314576168179 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 24852 17305 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 72.023 2 -0.9208211878736248 0.27756906077348065 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 57397 9025 LEHSHPKRP True H1975_Epitope_Rep3 1099.58867560527 1099.58756993586 39.709 2 -0.9208879051707923 0.2776028286511422 1.0 ['ENST00000375754.8_1_9:93657936-93658308:+|nuORF'] 139514 22373 YTKMCNCTQF True PC9_epitope_Rep2 1237.49298650889 1237.4918899358602 91.55 2 -0.9208995547428875 0.2776028286511422 1.0 ['ENST00000495123.5_1_2:159519810-159525751:+|nuORF'] 38752 23538 HHWEVHSPL True PC9_epitope_Rep3 1140.54647644012 1140.54484490379 95.819 3 -0.9209299626391633 0.2776089718800066 1.0 ['ENST00000315520.9_1_12:50367174-50369543:+|nuORF'] 109148 13227 TFMDVAIEFSQ True H1975_Epitope_Rep1 1286.58528958726 1286.5841899358602 55.975 2 -0.920955576106729 0.2776089718800066 1.0 ['nc|ENSG00000167554|Q8N9Z0-2|ZNF610', 'ENSG00000167554|ENST00000403906|ZNF610'] 2734 4541 AETTLALKEHS True H1975_Epitope_Rep2 1198.61936659686 1198.61773490379 22.576 3 -0.9211096791614902 0.2776465713693806 1.0 ['FOXN1|p.G146E|1|0.16|ENSG00000109101|chr17:28524816-28524816|G/A|missense_variant'] 100824 12113 SLRVRRRP True NCI_RA007_Epitope_Rep4 1038.6522789213398 1038.6511899358602 53.59 2 -0.921209504589526 0.2776611611335138 1.0 ['FOSB|p.A313Lfs*13|1|0.12|ENSG00000125740|chr19:45472926-45472927|-/TCTC|frameshift_variant'] 2722 6499 AETPTAPAP True H1975_Epitope_Rep3 853.4181476091699 853.4175949679301 29.968 1 -0.9212224101544536 0.2776611611335138 1.0 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1'] 49055 13871 KFLNLQNQHEK True NCI_RA007_Epitope_Rep4 1397.7415474182096 1397.7404499358602 60.622 2 -0.9212310448548114 0.2776611611335138 1.0 ['CCDC73|p.E339Q|2|0.39|ENSG00000186714|chr11:32642007-32642007|C/G|missense_variant'] 135157 9692 YARERSPY True PC9_epitope_Rep4 1040.5039429218 1040.50284993586 44.914 2 -0.921239142844312 0.2776611611335138 1.0 ['nc|ENSG00000134283|Q8NEY8-3|PPHLN1', 'nc|ENSG00000134283|Q8NEY8|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-6|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-9|PPHLN1', 'ENSG00000134283|ENST00000358314|PPHLN1', 'nc|ENSG00000134283|Q8NEY8-2|PPHLN1', 'ENST00000551406.5_1_12:42720030-42768950:+|nuORF', 'nc|ENSG00000134283|Q8NEY8-5|PPHLN1', 'ENST00000552202.5_1_12:42726503-42792805:+|nuORF'] 117258 16276 TYYYELWWFWL True NCI_RA007_Epitope_Rep1 1668.7653025545596 1668.7642099358602 67.419 2 -0.9212914833519801 0.2776611611335138 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 72652 7913 MWNWMVSL True PC9_epitope_Rep4 1065.47759414493 1065.4764899358602 37.868 2 -0.9212932304753517 0.2776611611335138 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 100206 7931 SLLKIIKLQ True NCI_RA007_Epitope_Rep1 1054.7114165069 1054.71030993586 34.843 2 -0.9212988982637732 0.2776611611335138 1.0 ['ENSG00000164961|ENST00000318410|WASHC5', 'WASHC5|p.Y1056Tfs*28|1|0.3|ENSG00000164961|chr8:125037249-125037252|TGTA/-|frameshift_variant'] 111959 10377 TLSEDQMSRL True PC9_epitope_Rep2 1178.56013746858 1178.55850490379 45.239 3 -0.9214321202973683 0.2777187046882552 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 41244 15947 IAELRIELK True PC9_epitope_Rep4 1083.6651945904698 1083.6640899358601 69.267 2 -0.9214328982960939 0.2777187046882552 1.0 ['nc|ENSG00000165699|Q92574-2|TSC1', 'ENSG00000165699|ENST00000298552|TSC1', 'TSC1|p.C822Sfs*3|1|0.39|ENSG00000165699|chr9:132901625-132901626|AC/-|frameshift_variant', 'TSC1|p.A944Gfs*8|1|0.15|ENSG00000165699|chr9:132897319-132897328|CTGCTCTCTG/-|frameshift_variant'] 48168 10647 KASKKKKR True PC9_epitope_Rep1 972.6556329662799 972.65452993586 45.845 2 -0.9214677991562965 0.2777187046882552 1.0 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46391373-46400221:+|nuORF', 'ENST00000531879.5_1_11:46367016-46400221:+|nuORF'] 10559 23194 CQLPKVDLVAQ True PC9_epitope_Rep6 1212.6536439305999 1212.6520049037902 102.31 3 -0.9215307758724032 0.2777248436140685 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 120610 23470 VGAGKRKRRHS True PC9_epitope_Rep5 1250.7432191840599 1250.74212993586 95.263 2 -0.9215337806062424 0.2777248436140685 1.0 ['ENSG00000145220|ENST00000343470|LYAR'] 116085 14312 TVSFHLWI True PC9_epitope_Rep3 1001.5334521449299 1001.53234993586 60.138 2 -0.9215865126557583 0.27774095553714445 1.0 ['nc|ENSG00000135314|Q4VXA5|KHDC1', 'ENST00000474593.1_1_6:73985278-74020035:-|nuORF'] 120510 12702 VFYIIRETI True PC9_epitope_Rep6 1152.6542955536 1152.65263490379 60.335 3 -0.9215998841680331 0.27774095553714445 1.0 ['ENST00000521988.5_2_8:93898270-93898507:-|nuORF'] 63506 20291 LPIVRTWRLN True H1975_Epitope_Rep3 1266.75607528354 1266.75442490379 84.853 3 -0.9216008475116514 0.27774095553714445 1.0 ['ENST00000402426.2_1_6:73765044-73765512:+|nuORF'] 116448 10151 TWWWRWPRCLR True NCI_RA007_Epitope_Rep2 1644.8248406330397 1644.8237499358602 44.073 2 -0.9216907840256919 0.27775323097315807 1.0 ['ENST00000341948.6_1_5:140595634-140595910:+|nuORF'] 118285 9456 VDALRLVSS True PC9_epitope_Rep2 958.54474510462 958.54364993586 41.71 2 -0.9217160936403159 0.27775323097315807 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 100729 20659 SLRIKQFIF True PC9_epitope_Rep3 1150.68626438822 1150.6851699358601 84.738 2 -0.9217352707516967 0.27775323097315807 1.0 ['ENST00000398148.7_3_19:6413682-6414126:-|nuORF'] 124952 18729 VLMIRMLR True NCI_RA007_Epitope_Rep1 1030.61436240126 1030.6132699358602 76.992 2 -0.9217373945696049 0.27775323097315807 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 111177 13054 TLFCQDGRLL True PC9_epitope_Rep4 1164.59612905448 1164.59449490379 58.107 3 -0.9217716096504465 0.27777317537900753 1.0 ['ENSG00000162621|ENST00000294635|LRRC53'] 125177 17478 VLQALPAEP True PC9_epitope_Rep1 936.5280324113198 936.52692993586 72.025 2 -0.9217787930106917 0.27777317537900753 1.0 ['ENST00000483458.1_1_9:131831674-131832729:+|nuORF'] 77833 12164 PAGAIAPLG True PC9_epitope_Rep6 765.43848913093 765.43738993586 58.145 2 -0.9218767951618706 0.2777831471688735 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 19887 14769 ELWAQALQTF True PC9_epitope_Rep3 1205.6080736371698 1205.6069699358602 61.944 2 -0.9219185209318258 0.27779311868338213 1.0 ['ENST00000337619.9_1_7:100803850-100804129:+|nuORF'] 100576 11127 SLQDRYVP True PC9_epitope_Rep3 976.4977949122 976.49668993586 47.798 2 -0.9219796646393723 0.27783070317138164 1.0 ['nc|ENSG00000082269|Q9P2D6-3|FAM135A', 'nc|ENSG00000082269|Q9P2D6-2|FAM135A', 'nc|ENSG00000082269|Q9P2D6-4|FAM135A', 'ENSG00000082269|ENST00000418814|FAM135A'] 100867 13602 SLSFWGVDG True PC9_epitope_Rep5 966.4446967101798 966.44358993586 57.344 2 -0.9220067073437263 0.2778544801877675 1.0 ['ENST00000474534.1_1_9:131798902-131809484:+|nuORF'] 101399 12407 SNDLRAFVFE True NCI_RA007_Epitope_Rep1 1196.5825871653199 1196.5814899358602 52.235 2 -0.9220200662907955 0.2778606140932185 1.0 ['ENSG00000198887|ENST00000361138|SMC5'] 58704 11378 LFKMKRNYYYF True H1975_Epitope_Rep1 1571.79589149019 1571.79478993586 48.744 2 -0.9220574194228586 0.2778606140932185 1.0 ['ENST00000506103.2_1_4:56284174-56284276:+|nuORF'] 93462 8102 RSEQVLGSWP True H1975_Epitope_Rep1 1157.58292151849 1157.58182993586 36.111 2 -0.9221531518871757 0.2779081646740481 1.0 ['ENST00000482360.5_1_1:6645916-6646228:+|nuORF'] 127168 7635 VQESGDRHQLR True NCI_RA007_Epitope_Rep1 1323.66435972667 1323.6632699358602 33.691 2 -0.9221585704676786 0.2779081646740481 1.0 ['ENST00000576921.1_1_16:3073594-3073723:-|nuORF'] 124953 18824 VLMIRMLR True NCI_RA007_Epitope_Rep1 1030.61436240126 1030.6132699358602 77.365 2 -0.9222129699714889 0.2779595499413267 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 24915 21248 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 86.937 2 -0.9222410656269685 0.2780109337898283 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 10748 16397 CWYFAEGRG True H1975_Epitope_Rep3 1087.4545502012297 1087.4534499358601 68.545 2 -0.9222737182583769 0.2780347060204039 1.0 ['MKRN3|p.R401W|1|0.53|ENSG00000179455|chr15:23566983-23566983|A/T|missense_variant'] 93092 24559 RRRLLPRGAL True H1975_Epitope_Rep3 1206.7785420636199 1206.77689490379 102.2 3 -0.9224340625329289 0.2780998923217096 1.0 ['ENST00000252599.8_2_19:17666455-17670143:+|nuORF'] 66866 19358 LSWERPRRP True PC9_epitope_Rep1 1195.6574238714297 1195.6557749037902 79.268 3 -0.922498909329795 0.27810985794944715 1.0 ['nc|ENSG00000132470|P16144-4|ITGB4', 'nc|ENSG00000132470|P16144-2|ITGB4', 'nc|ENSG00000132470|P16144-3|ITGB4', 'ENSG00000132470|ENST00000200181|ITGB4'] 6398 5030 APSAHFLKHAH True H1975_Epitope_Rep2 1214.6308747704202 1214.62921490379 24.428 3 -0.9225451532949929 0.2781105927173343 1.0 ['nc|ENSG00000170983|Q96KT6|LINC00208'] 16087 6456 EEDKGFYYIMK True H1975_Epitope_Rep1 1421.65370350025 1421.65260993586 29.896 2 -0.9225590157463461 0.2781105927173343 1.0 ['ACADL|p.N278D|1|0.13|ENSG00000115361|chr2:210204619-210204619|T/C|missense_variant'] 74638 8886 NLELNGSIL True NCI_RA007_Epitope_Rep1 971.52876068731 971.52766993586 38.565 2 -0.9225762895069812 0.2781105927173343 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 24963 3324 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 18.566 2 -0.9226052633253675 0.2781105927173343 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 109304 9502 TGFSFKSP True PC9_epitope_Rep3 869.4283183700499 869.4272299358599 41.498 2 -0.9226119807775728 0.2781105927173343 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'MCM3AP|p.E650Rfs*6|1|0.3|ENSG00000160294|chr21:46275236-46275236|C/-|frameshift_variant'] 62211 16314 LLPRPLPVP True PC9_epitope_Rep3 1000.6433369470799 1000.64222993586 67.887 2 -0.9226224038036719 0.2781105927173343 1.0 ['nc|ENSG00000241127|Q9NRH1-2|YAE1'] 117289 10196 VAADGPLR True PC9_epitope_Rep1 797.43955176009 797.43844993586 44.097 2 -0.922637794722058 0.2781105927173343 1.0 ['ENSG00000136237|ENST00000665637|RAPGEF5'] 3768 3862 AGTRTEAEAL True PC9_epitope_Rep4 1017.5090878718898 1017.50798993586 21.034 2 -0.9227351071571337 0.2781481634850304 1.0 ['ENST00000531925.5_1_19:1806419-1810672:-|nuORF'] 28487 11928 FSFCHPFP True PC9_epitope_Rep2 980.4214591677999 980.42036993586 51.204 2 -0.9227581009401217 0.2781488944709747 1.0 ['ENST00000418931.6_1_6:33043780-33043819:+|nuORF'] 30371 3899 GAEPELAVSAP True NCI_RA007_Epitope_Rep2 1039.5185899264297 1039.51748993586 19.801 2 -0.922809485570456 0.2781488944709747 1.0 ['ENSG00000108479|ENST00000588479|GALK1', 'ENST00000589030.1_1_17:73759945-73761208:-|nuORF', 'ENST00000592494.1_1_17:73759392-73761232:-|nuORF'] 122776 10048 VGVGQAEFDA True H1975_Epitope_Rep1 991.4610750503098 991.45996993586 43.589 2 -0.9228207262954425 0.2781488944709747 1.0 ['ENSG00000124772|ENST00000244751|CPNE5', 'nc|ENSG00000124772|Q9HCH3-2|CPNE5'] 124954 18956 VLMIRMLR True NCI_RA007_Epitope_Rep1 1030.61436240126 1030.6132699358602 77.878 2 -0.9228670455242148 0.2781488944709747 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 116202 8459 TVTRHDKRKLE True PC9_epitope_Rep3 1381.77899555609 1381.77736490379 37.5 3 -0.922871141428948 0.2781488944709747 1.0 ['ENSG00000183035|ENST00000329312|CYLC1'] 87437 6106 QTEKETMQD True H1975_Epitope_Rep2 1108.47065375784 1108.4695499358602 28.464 2 -0.922886234044982 0.2781488944709747 1.0 ['CON__P05784'] 121664 16083 VGLIVTSTGI True PC9_epitope_Rep4 958.5698972233 958.56880993586 69.797 2 -0.9228948010124319 0.2781488944709747 1.0 ['CD47|p.L210V|1|0.18|ENSG00000196776|chr3:108059515-108059515|G/C|missense_variant'] 140031 21592 YVLMLNLF True NCI_RA007_Epitope_Rep5 1011.54632532775 1011.54522993586 90.139 2 -0.9229287971150834 0.27815885722172384 1.0 ['nc|ENSG00000180116|Q86WS4-3|REDIC1'] 54621 11493 LADKVYFLPI True NCI_RA007_Epitope_Rep1 1177.67469664501 1177.67358993586 48.67 2 -0.9229646732687862 0.2781688196974716 1.0 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 94308 27012 RWTHLLRLLRH True H1975_Epitope_Rep2 1499.89496879819 1499.89333490379 111.46 3 -0.9229756296876047 0.2781787818982293 1.0 ['TPTE|p.L199H|1|0.11|ENSG00000274391|chr21:10569466-10569466|T/A|missense_variant'] 42482 7832 IERALDEV True H1975_Epitope_Rep2 943.49746055903 943.49636993586 35.075 2 -0.9230258193491773 0.27819870547482023 1.0 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1'] 72177 23911 MRPRCRRL True PC9_epitope_Rep4 1086.6015063017799 1086.6004099358602 100.42 2 -0.9230403357326725 0.27819870547482023 1.0 ['ENST00000289746.2_1_16:89256660-89256822:+|nuORF'] 104035 22501 SRSSSKSG True PC9_epitope_Rep5 794.38824446322 794.38714993586 91.553 2 -0.9230556435391484 0.27820866685067625 1.0 ['ENSG00000114857|ENST00000232978|NKTR'] 79311 22421 PGKKLRKDPC True PC9_epitope_Rep4 1140.6437479532399 1140.6426499358602 94.474 2 -0.9230987168721699 0.27821707030980475 1.0 ['ENST00000467133.5_1_2:239102950-239112145:-|nuORF', 'ENST00000463129.5_1_2:239103388-239112145:-|nuORF'] 139133 17065 YSQFQTAESE True PC9_epitope_Rep3 1188.4934973774 1188.49186490379 70.792 3 -0.9231063189820929 0.27821707030980475 1.0 ['nc|ENSG00000100241|O95248|SBF1', 'ENSG00000100241|ENST00000380817|SBF1', 'nc|ENSG00000100241|O95248-4|SBF1', 'ENST00000444527.2_1_8:56362086-56362449:-|nuORF'] 129749 3842 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 19.876 2 -0.9231329549544349 0.27821707030980475 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 82883 18643 PVVYMQHAL True PC9_epitope_Rep4 1056.5426369296401 1056.5415299358601 79.788 2 -0.9232262734373983 0.27821707030980475 1.0 ['ENSG00000204020|ENST00000404459|LIPN'] 121868 6840 VGPASGGGER True NCI_RA007_Epitope_Rep2 885.43044362837 885.4298949679301 31.222 1 -0.9232610857813555 0.27821707030980475 1.0 ['ENST00000447623.2_1_1:155164848-155165130:+|nuORF'] 100674 4426 SLQWRHRWDTP True PC9_epitope_Rep1 1480.7323797168397 1480.73074490379 21.909 3 -0.9233065145768994 0.27822319124567046 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 139617 8359 YTRQERYRARP True NCI_RA007_Epitope_Rep2 1494.7803925384198 1494.77875490379 37.155 3 -0.9233226011463442 0.27822319124567046 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 108063 6917 TDIYFWRLWGP True NCI_RA007_Epitope_Rep2 1452.7190210684798 1452.7173749037902 31.526 3 -0.9234325910530422 0.2782530702359597 1.0 ['nc|ENSG00000186111|O60331-2|PIP5K1C'] 13245 7638 DLVGAAHPGQS True PC9_epitope_Rep4 1050.50942222506 1050.50832993586 36.761 2 -0.9234436337646068 0.2782530702359597 1.0 ['ENST00000372577.2_1_9:131735455-131741548:+|nuORF'] 47153 11558 IWNTFFHERYL True PC9_epitope_Rep6 1524.7513838259201 1524.74917987172 55.563 4 -0.9234741506805033 0.2782530702359597 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 36458 5162 GVIRTDPSWL True NCI_RA007_Epitope_Rep3 1142.6084079903399 1142.6067749037902 27.298 3 -0.9235325075988794 0.27827682797256836 1.0 ['ENST00000551178.5_2_17:3576816-3577080:-|nuORF'] 94150 13669 RWGLRRTFFLW True NCI_RA007_Epitope_Rep2 1536.8466216234397 1536.8455299358602 57.812 2 -0.92360554000845 0.27828906519489477 1.0 ['ENST00000426538.6_1_16:58426452-58426581:+|nuORF'] 86670 13372 QRHFYKRL True PC9_epitope_Rep4 1146.6410455313 1146.63940490379 59.339 3 -0.9236120532683731 0.27828906519489477 1.0 ['ENST00000468148.5_1_6:57075047-57075092:-|nuORF'] 110880 16726 TLAEWWELLFF True NCI_RA007_Epitope_Rep2 1453.7281887698498 1453.72708993586 69.792 2 -0.9236186686098683 0.27828906519489477 1.0 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 115081 25005 TTTKTLELLLS True NCI_RA007_Epitope_Rep5 1218.7071189721 1218.7060299358602 103.68 2 -0.923650328691195 0.27828906519489477 1.0 ['ENST00000230914.4_1_5:44820328-44820394:+|nuORF'] 33421 7029 GLGDLADLTV True H1975_Epitope_Rep3 972.51277627 972.51166993586 31.999 2 -0.9236677030721144 0.2782951832995295 1.0 ['nc|ENSG00000196792|Q13033-2|STRN3', 'ENSG00000196792|ENST00000357479|STRN3'] 118767 6031 VEDSVECLHAM True H1975_Epitope_Rep3 1231.52130943171 1231.52020993586 28.213 2 -0.9236705673882294 0.2782951832995295 1.0 ['ENSG00000070371|ENST00000427926|CLTCL1', 'nc|ENSG00000070371|P53675-2|CLTCL1'] 106638 13015 SWRWRWKLHAM True H1975_Epitope_Rep3 1555.79829153203 1555.7971899358602 55.298 2 -0.9237208477868657 0.2783051408703331 1.0 ['ENST00000471419.6_1_X:70516831-70516888:+|nuORF'] 123270 9603 VHQRVHTGK True NCI_RA007_Epitope_Rep1 1060.5890099584399 1060.5879099358601 41.351 2 -0.923755111830725 0.2783150981663654 1.0 ['ENSG00000189144|ENST00000536220|ZNF573', 'nc|ENSG00000189144|Q86YE8-2|ZNF573', 'nc|ENSG00000189144|Q86YE8-4|ZNF573', 'nc|ENSG00000189144|Q86YE8-3|ZNF573'] 100264 15536 SLLREVGQV True PC9_epitope_Rep5 999.5712942056299 999.57018993586 64.769 2 -0.9238561010624562 0.2783664459161148 1.0 ['ENST00000572075.5_1_17:63645-84290:-|nuORF'] 95224 9830 SAARVYFLF True NCI_RA007_Epitope_Rep3 1072.5705659296398 1072.56946993586 45.74 2 -0.9238819212662117 0.2783725614635358 1.0 ['ENST00000257663.3_1_7:77423607-77427674:-|nuORF'] 102391 7259 SPVSPVKHD True PC9_epitope_Rep3 964.4977949122001 964.49668993586 32.931 2 -0.9238887145863646 0.2783725614635358 1.0 ['chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|90', 'chr15:53523322-53684228|265|18.12|0.04|8.74|-|2|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|79'] 37093 13429 GVSLGAIF True PC9_epitope_Rep5 762.4275900940601 762.42648993586 56.67 2 -0.9239126244409706 0.2783825172799139 1.0 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000588867.1_1_18:21114346-21115663:-|nuORF'] 8964 6177 AVGYVQETL True NCI_RA007_Epitope_Rep4 978.5022115862998 978.50110993586 30.369 2 -0.9239527270986709 0.2783886321307857 1.0 ['ENST00000528528.1_1_8:145748473-145749039:+|nuORF', 'ENST00000292524.5_1_8:145748479-145748992:+|nuORF'] 78786 3330 PEKYIELDGDR True NCI_RA007_Epitope_Rep2 1333.65139500113 1333.6497449037902 17.617 3 -0.9239626387151095 0.2783886321307857 1.0 ['nc|ENSG00000084110|P42357-2|HAL', 'ENSG00000084110|ENST00000261208|HAL'] 115226 12836 TVCQRCWLL True PC9_epitope_Rep6 1120.55215606752 1120.5510499358602 60.884 2 -0.9240373605414796 0.27843613337563977 1.0 ['ENSG00000084092|ENST00000264230|NOA1'] 93178 20588 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 85.284 2 -0.9240505726603665 0.27843613337563977 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 100581 6155 SLQEASSFFQR True H1975_Epitope_Rep3 1298.6255146064598 1298.62387490379 28.688 3 -0.9240612029540338 0.27843840529728237 1.0 ['ENST00000536668.2_1_12:10999664-11034822:-|nuORF', 'ENSG00000111215|ENST00000228811|PRR4', 'C12orf5-PRR4|1|fusion'] 128458 6464 VSERREQRETQ True PC9_epitope_Rep2 1416.7069528146399 1416.7053149037902 30.277 3 -0.9240883363870541 0.27843840529728237 1.0 ['ENST00000313421.11_1_11:60739160-60739313:+|nuORF'] 68235 19541 LTQVLDKSL True PC9_epitope_Rep5 1015.5913609438699 1015.59026993586 80.217 2 -0.9241808066133148 0.27843840529728237 1.0 ['ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.T3539Sfs*28|1|0.35|ENSG00000086570|chr5:151521979-151521980|-/ATGAA|frameshift_variant', 'FAT2|p.S1957C|1|0.35|ENSG00000086570|chr5:151545257-151545257|G/C|missense_variant'] 74940 18224 NLTLIDLPG True PC9_epitope_Rep4 954.5385970950199 954.53750993586 78.169 2 -0.9242278305247931 0.27844294857647317 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'nc|ENSG00000197959|Q9UQ16|DNM3', 'nc|ENSG00000197959|Q9UQ16-4|DNM3', 'ENSG00000197959|ENST00000627582|DNM3', 'nc|ENSG00000197959|Q9UQ16-2|DNM3', 'nc|ENSG00000197959|Q9UQ16-5|DNM3'] 15365 7431 EALIRSSL True H1975_Epitope_Rep2 887.50763131991 887.50652993586 33.528 2 -0.924235239840808 0.27844294857647317 1.0 ['ENSG00000135749|ENST00000258229|PCNX2', 'nc|ENSG00000135749|A6NKB5-4|PCNX2', 'nc|ENSG00000135749|A6NKB5-3|PCNX2'] 112038 13140 TLSYCLPLPP True PC9_epitope_Rep2 1102.5732683515798 1102.57216993586 55.815 2 -0.9242544221380614 0.27844294857647317 1.0 ['ENST00000565912.1_1_16:57411753-57412206:+|nuORF'] 45442 9822 ISEARQNTL True PC9_epitope_Rep3 1030.54072235334 1030.5396299358601 42.74 2 -0.9242641423028624 0.27844294857647317 1.0 ['ENSG00000137502|ENST00000527633|RAB30'] 81746 8318 PSCQRRGRRRS True PC9_epitope_Rep5 1357.72216646965 1357.72051490379 36.933 3 -0.9242923748330638 0.27844294857647317 1.0 ['ENST00000573539.5_1_17:3442880-3458098:-|nuORF'] 24860 4213 FDDGDCCD True H1975_Epitope_Rep3 888.226583982 888.22548993586 21.323 2 -0.9243010812825427 0.27844294857647317 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 66552 16865 LSSILKVPE True PC9_epitope_Rep1 984.5855472874399 984.58444993586 69.696 2 -0.9243642714070087 0.2784490606637424 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'nc|ENSG00000164944|Q69YN4-4|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 14216 20630 DSVLVAKTKYL True H1975_Epitope_Rep2 1235.71253870571 1235.7114499358602 85.449 2 -0.9244115706867031 0.2784490606637424 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 100186 8942 SLLGGRGSLP True PC9_epitope_Rep1 955.5450794577899 955.5439899358599 39.236 2 -0.9244747927374242 0.2784865998151699 1.0 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'ROBO4|p.I751Sfs*43|2|0.13|ENSG00000154133|chr11:124887162-124887162|G/-|frameshift_variant', 'ROBO4|p.L856Cfs*18|2|0.14|ENSG00000154133|chr11:124886692-124886693|AG/T|frameshift_variant', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4', 'ENST00000529941.1_1_11:124767484-124767703:-|nuORF', 'ENST00000533337.1_1_11:124766750-124767703:-|nuORF'] 130836 13382 VVFVPEPC True NCI_RA007_Epitope_Rep4 888.4415259060398 888.44042993586 58.646 2 -0.9245311445084656 0.27849724854152014 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 108426 9005 TEEFITVYP True PC9_epitope_Rep1 1097.5280919809697 1097.52698993586 39.485 2 -0.9245633787325496 0.27849724854152014 1.0 ['ENSG00000154124|ENST00000284274|OTULIN'] 121562 15876 VGKRNARA True NCI_RA007_Epitope_Rep5 870.5147823890198 870.5142349679301 67.788 1 -0.9245807093566818 0.27849724854152014 1.0 ['ENST00000405731.7_1_7:6618146-6618326:+|nuORF', 'ENST00000396707.6_1_7:6617123-6618326:+|nuORF'] 24953 21963 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 91.074 2 -0.9246110895841209 0.27849724854152014 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 9155 4331 AVNAEWYSK True NCI_RA007_Epitope_Rep2 1066.5083595959002 1066.5072699358602 21.484 2 -0.924615390993852 0.27849724854152014 1.0 ['ENST00000321250.12_1_8:29963396-29963519:+|nuORF'] 57379 9168 LEHLRELQP True PC9_epitope_Rep2 1133.61930702721 1133.61820993586 40.602 2 -0.9246283768177774 0.27849724854152014 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 70960 12712 MENLQQDYELK True NCI_RA007_Epitope_Rep5 1409.64968074897 1409.6485899358602 55.561 2 -0.9246318374500392 0.27849724854152014 1.0 ['ENSG00000103494|ENST00000647211|RPGRIP1L', 'nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 135737 21061 YEKKPKKQKRR True H1975_Epitope_Rep1 1487.9048647755496 1487.90320490379 87.478 3 -0.9246501436047998 0.27849724854152014 1.0 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF'] 92328 7651 RQNDDQRKSNR True PC9_epitope_Rep1 1415.69778511327 1415.6961449037901 34.252 3 -0.9247517735103038 0.27852709971038475 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'nc|ENSG00000116641|Q96N67-7|DOCK7'] 138878 7941 YSDRLSLERQK True NCI_RA007_Epitope_Rep1 1393.73137665733 1393.7297249037902 34.881 3 -0.9247623055863198 0.27852709971038475 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49', 'nc|ENSG00000137821|Q8IUZ0-3|LRRC49', 'ENSG00000137821|ENST00000260382|LRRC49', 'ENST00000560691.5_1_15:71192806-71200991:+|nuORF', 'ENST00000560980.5_1_15:71185191-71211425:+|nuORF', 'nc|ENSG00000137821|Q8IUZ0-4|LRRC49'] 82534 8563 PVFPRSVP True H1975_Epitope_Rep3 897.5072373970899 897.50614993586 37.926 2 -0.9247894593188816 0.27852709971038475 1.0 ['UGGT2|p.G473R|1|0.37|ENSG00000102595|chr13:95949373-95949373|C/G|missense_variant'] 33545 20271 GLIRCQDFL True PC9_epitope_Rep1 1063.54845058607 1063.5473499358602 82.8 2 -0.9248511705372616 0.2785370495511026 1.0 ['ENSG00000062370|ENST00000354340|ZNF112', 'nc|ENSG00000062370|Q9UJU3|ZNF112'] 27482 9620 FPAGHKAF True PC9_epitope_Rep4 873.44972252097 873.44862993586 44.628 2 -0.9251364464606602 0.27864353486319504 1.0 ['ENST00000369604.5_1_1:114301878-114302094:-|nuORF'] 1531 5036 AEERLPAAP True H1975_Epitope_Rep3 952.4977949121998 952.49668993586 24.492 2 -0.9251856411169577 0.2786534828237695 1.0 ['ENSG00000141314|ENST00000269051|RHBDL3', 'nc|ENSG00000141314|P58872-3|RHBDL3'] 48330 9619 KDSNPMVICQL True H1975_Epitope_Rep1 1246.6049794860198 1246.60333490379 41.925 3 -0.9252094829238343 0.2786634305099705 1.0 ['ENST00000538944.1_1_11:68512411-68514777:-|nuORF', 'nc|ENSG00000132749|Q9Y4I5-3|TESMIN', 'nc|ENSG00000132749|Q9Y4I5-2|TESMIN', 'ENSG00000132749|ENST00000255087|TESMIN'] 25415 18167 FEKLDDYAS True NCI_RA007_Epitope_Rep1 1086.4869554449797 1086.4858499358602 74.81 2 -0.9252324109292447 0.2786733779218093 1.0 ['nc|ENSG00000109854|Q9BUP3-3|HTATIP2', 'ENSG00000109854|ENST00000451739|HTATIP2', 'nc|ENSG00000109854|Q9BUP3-2|HTATIP2'] 133130 9756 WCRCDSTAF True PC9_epitope_Rep4 1087.42153582079 1087.42042993586 45.165 2 -0.9252792886314725 0.2786971151194219 1.0 ['ASTN1|p.V1147Wfs*10|1|0.26|ENSG00000152092|chr1:176876562-176876562|G/-|frameshift_variant', 'nc|ENSG00000152092|O14525-3|ASTN1', 'ENSG00000152092|ENST00000361833|ASTN1', 'nc|ENSG00000152092|O14525|ASTN1'] 15099 7293 EADNPAPTR True NCI_RA007_Epitope_Rep2 969.45157299577 969.45046993586 32.989 2 -0.9253322833301565 0.27873464153233035 1.0 ['ENST00000318787.13_1_6:125613996-125621705:-|nuORF'] 94586 23683 RYKFIHLNV True NCI_RA007_Epitope_Rep3 1188.6767623336798 1188.67566993586 102.69 2 -0.9253678275536049 0.2787545332947228 1.0 ['nc|ENSG00000179873|P59045-3|NLRP11', 'nc|ENSG00000179873|P59045-2|NLRP11', 'ENSG00000179873|ENST00000589093|NLRP11', 'NLRP11|p.I561Rfs*19|1|0.16|ENSG00000179873|chr19:55808930-55808931|-/TG|frameshift_variant'] 24920 21842 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 89.417 2 -0.925403068299014 0.2787545332947228 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 114206 20270 TRVDTILEF True PC9_epitope_Rep3 1092.5815245361598 1092.5804299358601 83.225 2 -0.9254921393557041 0.27879815780039163 1.0 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000476585.5_1_2:61729332-61753650:-|nuORF'] 27036 9495 FLMDGQVRSR True NCI_RA007_Epitope_Rep4 1207.6131761009499 1207.61206993586 43.373 2 -0.9255007072140157 0.27879815780039163 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'ENST00000561252.1_1_15:90768241-90768761:+|nuORF', 'ENST00000560993.1_1_15:90767112-90768514:+|nuORF'] 104036 20587 SRSSSKSG True PC9_epitope_Rep6 794.38824446322 794.38714993586 91.918 2 -0.9255164177352428 0.27879815780039163 1.0 ['ENSG00000114857|ENST00000232978|NKTR'] 137316 17039 YLHSWMKI True PC9_epitope_Rep3 1076.54772231008 1076.5466299358602 70.695 2 -0.9255391094860268 0.278808102257215 1.0 ['ENSG00000127329|ENST00000334414|PTPRB', 'PTPRB|p.W1340*|1|0.13|ENSG00000127329|chr12:70559383-70559383|C/-|frameshift_variant', 'PTPRB|p.R1326Dfs*26|1|0.22|ENSG00000127329|chr12:70559428-70559428|C/-|frameshift_variant', 'PTPRB|p.E1160Sfs*17|2|0.15|ENSG00000127329|chr12:70562880-70562880|C/-|frameshift_variant', 'ENST00000552253.1_1_12:70986014-71031175:-|nuORF', 'ENST00000538174.6_1_12:70979073-71031175:-|nuORF'] 58465 11203 LEYDDESYSY True H1975_Epitope_Rep1 1282.48774329062 1282.4866499358602 48.061 2 -0.9255587440564541 0.27882414582356674 1.0 ['nc|ENSG00000099139|Q92824|PCSK5', 'ENSG00000099139|ENST00000674117|PCSK5'] 46015 9550 ISVEKGYNITM True H1975_Epitope_Rep3 1253.6325741328499 1253.6314699358602 41.742 2 -0.925569811758347 0.27882414582356674 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3', 'nc|ENSG00000164796|Q7Z407-5|CSMD3', 'CSMD3|p.S3015Lfs*14|2|0.38|ENSG00000164796|chr8:112289471-112289471|C/-|frameshift_variant', 'CSMD3|p.V3191Lfs*17|1|0.3|ENSG00000164796|chr8:112265528-112265528|C/-|frameshift_variant', 'CSMD3|p.H3450Qfs*4|1|0.18|ENSG00000164796|chr8:112244445-112244446|TA/-|frameshift_variant', 'CSMD3|p.N3536Kfs*11|1|0.15|ENSG00000164796|chr8:112237209-112237210|-/T|frameshift_variant'] 47344 15557 IYHKMSISEL True PC9_epitope_Rep5 1219.6270948295899 1219.6254449037901 64.85 3 -0.9255881792224308 0.27882414582356674 1.0 ['ENST00000490579.1_1_3:183995094-184008674:+|nuORF', 'ENST00000488401.5_1_3:183993962-184009147:+|nuORF', 'nc|ENSG00000145194|P0DPD6-3|ECE2', 'ENSG00000145194|ENST00000404464|ECE2', 'nc|ENSG00000145194|P0DPD6|ECE2', 'nc|ENSG00000284917|P0DPD8|EEF1AKMT4-ECE2'] 30656 13637 GALGHDALQFP True PC9_epitope_Rep2 1124.56145779792 1124.56036993586 57.746 2 -0.9256152551627518 0.2788340893736126 1.0 ['ENST00000403714.7_1_2:25380894-25381050:+|nuORF'] 16904 7436 EGAQQRWK True NCI_RA007_Epitope_Rep2 1001.5042772749699 1001.50318993586 33.552 2 -0.9256342065963435 0.2788815508279447 1.0 ['ENST00000495205.1_1_1:201104793-201114281:-|nuORF', 'ENSG00000116857|ENST00000367330|TMEM9'] 16932 6815 EGEEHHPV True H1975_Epitope_Rep3 932.3988091469199 932.39770993586 31.167 2 -0.9256343252867322 0.2788815508279447 1.0 ['nc|ENSG00000142864|Q8NC51-4|SERBP1', 'ENSG00000142864|ENST00000361219|SERBP1', 'nc|ENSG00000142864|Q8NC51-2|SERBP1', 'nc|ENSG00000142864|Q8NC51|SERBP1', 'ENST00000484880.1_1_1:67885652-67890638:-|nuORF', 'ENST00000510079.2_1_4:79102321-79102666:-|nuORF'] 138991 4765 YSFFRRCWDYH True H1975_Epitope_Rep3 1578.6826526430998 1578.6810149037901 23.454 3 -0.9256734070914892 0.2788876480401484 1.0 ['ENST00000308982.11_1_3:128631468-128631576:+|nuORF'] 67314 15672 LTDPRQFL True PC9_epitope_Rep1 988.53418042092 988.53308993586 65.104 2 -0.9256924222935808 0.2788876480401484 1.0 ['ENST00000500118.2_1_8:6262544-6263480:-|nuORF'] 80029 23109 PKGKAPLRARS True PC9_epitope_Rep3 1179.72002412799 1179.71836490379 94.156 3 -0.9257087553216452 0.2788898999090082 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 117323 9810 VAAKKAGL True PC9_epitope_Rep4 756.4857736765199 756.48466993586 45.375 2 -0.9257123355480411 0.2788898999090082 1.0 ['SH3TC1|p.G548V|1|0.31|ENSG00000125089|chr4:8227337-8227337|G/T|missense_variant'] 30363 5618 GAELRQPP True H1975_Epitope_Rep3 866.4610154806599 866.45990993586 26.646 2 -0.9257160289189919 0.2788898999090082 1.0 ['ENSG00000261594|ENST00000562197|TPBGL'] 77830 14067 PAGAIAPLG True PC9_epitope_Rep3 765.43848913093 765.43738993586 59.196 2 -0.9257478343275823 0.2788998414558489 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 45000 22483 IQKYLWWKRYL True PC9_epitope_Rep1 1595.8976541367897 1595.89654993586 91.281 2 -0.9257863815259632 0.27890818858560795 1.0 ['ENSG00000118402|ENST00000369816|ELOVL4'] 93185 21194 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 87.718 2 -0.9257899022223232 0.27890818858560795 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 46571 10282 ITRLVFDP True H1975_Epitope_Rep3 959.5440168286299 959.54290993586 44.601 2 -0.9258278984285554 0.27890818858560795 1.0 ['ENSG00000114166|ENST00000263754|KAT2B', 'KAT2B|p.A679Hfs*22|1|0.3|ENSG00000114166|chr3:20146345-20146345|G/-|frameshift_variant'] 23438 13304 EVWEGLWNNT True PC9_epitope_Rep1 1246.5618517207397 1246.56074993586 56.037 2 -0.9258337365252326 0.27890818858560795 1.0 ['ENSG00000111816|ENST00000606080|FRK', 'nc|ENSG00000111816|P42685-2|FRK', 'FRK|p.G374Dfs*8|1|0.22|ENSG00000111816|chr6:115944263-115944263|C/-|frameshift_variant'] 115524 11964 TVGRRRKKRRR True NCI_RA007_Epitope_Rep3 1467.9447129552698 1467.94306490379 54.182 3 -0.9258631349579457 0.27890818858560795 1.0 ['ENST00000235307.6_1_1:184356289-184446531:+|nuORF'] 25003 3770 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 20.656 2 -0.9259562319986692 0.27895563949160485 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 96798 7972 SERSKSSVM True H1975_Epitope_Rep3 1009.48624425233 1009.48514993586 35.636 2 -0.9259658434376177 0.27895563949160485 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 58219 5024 LESTELNTPVG True NCI_RA007_Epitope_Rep5 1158.57683307854 1158.5757299358602 26.029 2 -0.9259970832039358 0.27896173356859283 1.0 ['ENST00000375377.1_1_10:30317616-30317655:-|nuORF'] 52492 20783 KPMYRRWWEQF True H1975_Epitope_Rep1 1625.7925374452495 1625.79144993586 86.366 2 -0.9260024152799188 0.27896173356859283 1.0 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 54631 4609 LADLSPSTHY True H1975_Epitope_Rep3 1102.5294889633 1102.52838993586 22.851 2 -0.9260686826502637 0.27898545730236407 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 58436 3608 LEWERNRR True NCI_RA007_Epitope_Rep4 1157.60538829857 1157.6042899358602 19.937 2 -0.9261003312833118 0.2789953960245913 1.0 ['nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528'] 80549 13836 PLLVQMDCNY True PC9_epitope_Rep3 1194.5413166003 1194.5396849037902 58.3 3 -0.9261364215282706 0.27901527264707504 1.0 ['nc|ENSG00000196115|Q6NVV9-6|ADAM5', 'nc|ENSG00000196115|Q6NVV9-7|ADAM5', 'nc|ENSG00000196115|Q6NVV9|ADAM5'] 755 15444 AAVRRPRS True NCI_RA007_Epitope_Rep5 911.54133149003 911.54022993586 66.108 2 -0.9261370987080819 0.27901527264707504 1.0 ['ENST00000330871.3_1_17:76355142-76356149:-|nuORF'] 71854 22021 MPGAVCPW True PC9_epitope_Rep2 859.3720664472299 859.37096993586 90.175 2 -0.9261709706233092 0.27903899433486334 1.0 ['CDKN2A|p.A76Vfs*69|1|0.27|ENSG00000147889|chr9:21971129-21971132|GTGG/-|frameshift_variant', 'CDKN2A|p.V82Cfs*64|1|0.38|ENSG00000147889|chr9:21971115-21971115|C/-|frameshift_variant', 'CDKN2A|p.A102Rfs*44|1|0.15|ENSG00000147889|chr9:21971055-21971055|C/-|frameshift_variant', 'CDKN2A|p.S56Afs*90|1|0.62|ENSG00000147889|chr9:21971193-21971193|T/-|frameshift_variant'] 41954 7699 IEAYQRLDR True H1975_Epitope_Rep1 1162.6094706195 1162.60836993586 34.576 2 -0.9261851275646086 0.2790489317711923 1.0 ['ENSG00000130054|ENST00000252338|NALF2'] 80611 18408 PLPHIAVL True PC9_epitope_Rep2 858.5327238689399 858.53162993586 76.136 2 -0.9262884852834659 0.2790864357486458 1.0 ['ENSG00000162591|ENST00000356575|MEGF6', 'nc|ENSG00000162591|O75095-2|MEGF6'] 77045 14811 NVYAQYDSGL True PC9_epitope_Rep2 1128.50875351872 1128.50710490379 62.235 3 -0.9263182335566453 0.27911079259636984 1.0 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1', 'nc|ENSG00000111799|Q99715-2|COL12A1'] 93182 20932 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 86.657 2 -0.9263417188151358 0.27911079259636984 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 15122 5044 EAEDVSFRFM True H1975_Epitope_Rep3 1229.53867374801 1229.5375699358601 24.522 2 -0.9263947043438067 0.27911079259636984 1.0 ['NRXN3|p.K744Sfs*6|1|0.41|ENSG00000021645|chr14:78803804-78803804|C/-|frameshift_variant', 'nc|ENSG00000021645|Q9Y4C0-4|NRXN3', 'ENSG00000021645|ENST00000335750|NRXN3', 'nc|ENSG00000021645|Q9Y4C0|NRXN3', 'nc|ENSG00000021645|Q9Y4C0-3|NRXN3'] 3685 14951 AGRVRPRG True NCI_RA007_Epitope_Rep4 867.5151167421898 867.51400993586 64.974 2 -0.9264065622751685 0.27911079259636984 1.0 ['ENST00000459719.6_1_Y:21729415-21749099:+|nuORF'] 61111 23709 LLCWLLMKIIK True NCI_RA007_Epitope_Rep3 1372.8338572220398 1372.83327496793 102.79 1 -0.9264146147274722 0.27911079259636984 1.0 ['ENST00000539921.5_1_11:62619473-62619665:-|nuORF'] 18998 13848 ELGEQIDNLQR True PC9_epitope_Rep3 1313.6575430107298 1313.65644993586 58.347 2 -0.9264907246432184 0.27911079259636984 1.0 ['MYH8|p.K1812Rfs*39|1|0.41|ENSG00000133020|chr17:10392861-10392861|C/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2', 'ENSG00000006788|ENST00000252172|MYH13', 'ENSG00000092054|ENST00000355349|MYH7', 'ENSG00000197616|ENST00000405093|MYH6', 'ENSG00000109063|ENST00000583535|MYH3'] 17923 10532 EIEATLERL True H1975_Epitope_Rep2 1072.57643915572 1072.57534993586 45.533 2 -0.9265185956628054 0.27911079259636984 1.0 ['ENSG00000091436|ENST00000375213|MAP3K20', 'nc|ENSG00000091436|Q9NYL2-2|MAP3K20'] 52277 14824 KNVLTFLEYC True PC9_epitope_Rep4 1228.61619579272 1228.6145549037901 64.959 3 -0.9265296733646731 0.27911079259636984 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2'] 55078 14403 LALKKEDVQLH True PC9_epitope_Rep3 1292.74523581632 1292.7436049037901 60.5 3 -0.9265445166589508 0.27912072767364937 1.0 ['ENSG00000170160|ENST00000399273|CCDC144A', 'nc|ENSG00000266302|A2RUR9|CCDC144A'] 83268 25145 QAEQKKKKRHS True PC9_epitope_Rep2 1366.77932990926 1366.77822993586 102.39 2 -0.9265748707427417 0.27913066247708823 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 44622 19637 IPIHQQRRNR True NCI_RA007_Epitope_Rep4 1316.75378386776 1316.7532749679299 84.853 1 -0.9266083030635626 0.279154378324743 1.0 ['L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|151|3|sense'] 85308 13171 QLAAELAEYTA True H1975_Epitope_Rep1 1178.58191845898 1178.58082993586 55.758 2 -0.9266206419042746 0.27916046524447385 1.0 ['ENSG00000092820|ENST00000367075|EZR'] 7725 7132 ASRSRCDSR True NCI_RA007_Epitope_Rep4 1036.4832245605598 1036.48212993586 34.052 2 -0.9266298852898327 0.27916046524447385 1.0 ['ENST00000580750.5_1_17:79994503-79995558:-|nuORF'] 24875 381 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 2.0344 2 -0.9267133958063104 0.27918417970095777 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 374 6457 AALDETPVAGP True NCI_RA007_Epitope_Rep4 1039.5185899264297 1039.51748993586 31.435 2 -0.9267229302723209 0.27919026554770077 1.0 ['ENSG00000185085|ENST00000330574|INTS5'] 24102 10084 EYSAMRDQYMR True H1975_Epitope_Rep3 1448.61766942804 1448.61656993586 43.826 2 -0.92672787695769 0.27919026554770077 1.0 ['nc|ENSG00000133703|P01116|KRAS', 'nc|ENSG00000174775|P01112-2|HRAS', 'ENSG00000133703|ENST00000311936|KRAS', 'ENSG00000213281|ENST00000369535|NRAS', 'ENSG00000174775|ENST00000311189|HRAS'] 36107 22633 GVEKIIKIWSP True PC9_epitope_Rep2 1268.7492585675998 1268.74816993586 92.553 2 -0.9267859524202958 0.2792001984345717 1.0 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'GPHN-DCAF5|1|fusion'] 22720 3444 ETWSVAFSP True H1975_Epitope_Rep2 1022.4709114580198 1022.4698099358601 18.039 2 -0.926892271677545 0.27926525100249416 1.0 ['nc|ENSG00000176871|Q9NYS7-2|WSB2', 'ENSG00000176871|ENST00000315436|WSB2'] 25002 3703 FDDGDCCD True NCI_RA007_Epitope_Rep5 888.226583982 888.22548993586 20.318 2 -0.9269013987568708 0.27927741722128063 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 90386 18884 RILDIRIQNP True H1975_Epitope_Rep2 1236.7302544585198 1236.72914993586 78.397 2 -0.9269354930894347 0.27927741722128063 1.0 ['ENST00000266682.9_1_12:85286049-85306341:-|nuORF'] 56012 21199 LDKDFVFDI True PC9_epitope_Rep3 1110.5597264624198 1110.5586299358602 86.832 2 -0.9269751345783939 0.27927741722128063 1.0 ['CDC123|p.E228K|1|0.19|ENSG00000151465|chr10:12237260-12237260|G/A|missense_variant'] 104376 7870 SSGERWIRY True H1975_Epitope_Rep3 1152.5676058075198 1152.56650993586 35.248 2 -0.9269882345770557 0.27927741722128063 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 15612 9520 EAVFSALVT True PC9_epitope_Rep4 935.4963979298699 935.49530993586 44.229 2 -0.9270654435991724 0.27928734808609146 1.0 ['ENSG00000138095|ENST00000260665|LRPPRC'] 129494 6289 VTEVSLVW True NCI_RA007_Epitope_Rep2 931.5014833103099 931.50038993586 29.069 2 -0.9271460898217783 0.27933861522562864 1.0 ['ATG2B|p.K1551T|1|0.25|ENSG00000066739|chr14:96305670-96305670|T/G|missense_variant'] 19376 8317 ELNLTEHFGK True NCI_RA007_Epitope_Rep1 1186.59823722946 1186.5971499358602 36.352 2 -0.92714688584381 0.2793408470886495 1.0 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.Q1049Lfs*8|1|0.14|ENSG00000120800|chr12:101327183-101327186|CCAA/-|frameshift_variant', 'ENST00000551825.1_1_12:101673946-101684681:+|nuORF'] 59907 14028 LHIFIPFCIIA True H1975_Epitope_Rep3 1285.72568667205 1285.7245899358602 59.28 2 -0.9272137594597493 0.2793408470886495 1.0 ['ENSG00000197646|ENST00000397747|PDCD1LG2', 'nc|ENSG00000197646|Q9BQ51-2|PDCD1LG2'] 55090 11058 LALLYWRMFR True PC9_epitope_Rep3 1367.75363275539 1367.7525299358601 47.532 2 -0.9272346047522261 0.2793408470886495 1.0 ['ENSG00000144218|ENST00000672756|AFF3', 'nc|ENSG00000144218|P51826-2|AFF3'] 116447 9727 TWWWRWPRCLR True H1975_Epitope_Rep3 1644.8248406330397 1644.8237499358602 42.435 2 -0.9272652893004508 0.2793507763953761 1.0 ['ENST00000341948.6_1_5:140595634-140595910:+|nuORF'] 42490 9256 IERIRPLKNTE True H1975_Epitope_Rep1 1367.7884976106295 1367.78740993586 40.515 2 -0.927336140302922 0.2794158170294847 1.0 ['TRMT9B|p.V268I|1|0.24|ENSG00000250305|chr8:13021481-13021481|G/A|missense_variant'] 12461 8387 DKQLLYSEAK True H1975_Epitope_Rep1 1193.62920300457 1193.62810993586 37.188 2 -0.9273943721393774 0.27945390422659394 1.0 ['nc|ENSG00000065361|P21860-4|ERBB3', 'ENSG00000065361|ENST00000267101|ERBB3', 'nc|ENSG00000065361|P21860-5|ERBB3', 'ENST00000548709.1_1_12:56490921-56492754:+|nuORF'] 100197 9324 SLLHDVGP True PC9_epitope_Rep2 836.43921740692 836.43812993586 41.203 2 -0.9273964640290834 0.27945390422659394 1.0 ['ENSG00000196872|ENST00000397899|CRACDL'] 48949 10091 KEYGHYSSP True PC9_epitope_Rep1 1066.47197408718 1066.47086993586 43.687 2 -0.9274157367575951 0.27945390422659394 1.0 ['nc|ENSG00000215695|Q92681|RSC1A1'] 133063 16311 VYWEGIDEP True PC9_epitope_Rep2 1106.4920408254197 1106.49094993586 67.986 2 -0.927425097708948 0.27945390422659394 1.0 ['ENSG00000124253|ENST00000319441|PCK1', 'nc|ENSG00000124253|P35558-2|PCK1'] 36506 6766 GVKGAKIK True PC9_epitope_Rep4 799.5279728416699 799.52686993586 33.224 2 -0.9275198097469229 0.27945390422659394 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 5253 16056 ALQRAAWAI True PC9_epitope_Rep1 998.5661492555398 998.56504993586 66.573 2 -0.9275412111192866 0.27945390422659394 1.0 ['KCNH7|p.G1018A|2|0.34|ENSG00000184611|chr2:162379931-162379931|C/G|missense_variant'] 130654 25485 VVAVAGTIIL True PC9_epitope_Rep2 954.61136811246 954.61026993586 103.71 2 -0.9275438385975603 0.27945390422659394 1.0 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 55908 11646 LDGNSHFRHL True PC9_epitope_Rep3 1194.58940388126 1194.58774490379 49.811 3 -0.9275568289905493 0.27945390422659394 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644'] 122700 14578 VGTTYKHL True PC9_epitope_Rep5 917.4970666362099 917.49596993586 61.075 2 -0.9275752001028713 0.27946383060794333 1.0 ['nc|ENSG00000110888|Q6IMN6-6|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-10|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-7|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-3|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-2|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6-9|CAPRIN2', 'nc|ENSG00000110888|Q6IMN6|CAPRIN2', 'ENSG00000110888|ENST00000695402|CAPRIN2'] 42829 10673 IFLFFFLCLYW True H1975_Epitope_Rep1 1510.7723025112998 1510.77120993586 46.012 2 -0.9276804296983747 0.2795013087202094 1.0 ['chr3:153927317-153979854|138|13.17|0.05|7.92|-|0|TE_info:L1PB1,L1PB1_dup2586,L1,LINE,donor,+,153979854,153983404|LINC02006,None|42'] 121662 23426 VGLIQQQKTFR True PC9_epitope_Rep3 1316.75646920636 1316.75587496793 95.385 1 -0.9277447370001541 0.27953878579989255 1.0 ['ENST00000506227.2_1_4:83501272-83501506:-|nuORF'] 128742 17446 VSPRVGVR True NCI_RA007_Epitope_Rep3 868.5242844435598 868.52318993586 76.544 2 -0.9277522868263757 0.2795487106017192 1.0 ['ENST00000531214.5_1_11:797830-797989:-|nuORF'] 10711 5757 CTGHKGGH True H1975_Epitope_Rep1 795.3446058294301 795.3440549679301 27.215 1 -0.9277734480720999 0.2795509332598664 1.0 ['ZNF107|p.K298Nfs*16|1|0.31|ENSG00000196247|chr7:64707193-64707193|G/-|frameshift_variant', 'nc|ENSG00000196247|Q9UII5|ZNF107', 'ENSG00000196247|ENST00000620827|ZNF107'] 31937 13137 GERYWRYSEER True H1975_Epitope_Rep1 1529.7011391582098 1529.70004993586 55.624 2 -0.9277881878445882 0.2795509332598664 1.0 ['ENSG00000125966|ENST00000246186|MMP24'] 120689 17456 VGAPWDGP True PC9_epitope_Rep1 797.3708034939299 797.36970993586 71.942 2 -0.9277981443398146 0.2795509332598664 1.0 ['ENSG00000143127|ENST00000369304|ITGA10', 'ITGA10|p.E480Gfs*10|2|0.21|ENSG00000143127|chr1:145901520-145901521|-/C|frameshift_variant', 'nc|ENSG00000143127|O75578-2|ITGA10', 'ENST00000468261.1_1_1:145525044-145528351:+|nuORF'] 118553 12203 VDVVLEKSE True NCI_RA007_Epitope_Rep2 1016.5389910178399 1016.53788993586 52.065 2 -0.9278235193631685 0.27955315573431777 1.0 ['ENSG00000214456|ENST00000381848|PLIN5', 'PLIN5|p.A150S|1|0.07|ENSG00000214456|chr19:4529145-4529145|C/A|missense_variant', 'ENST00000586020.1_1_19:4529055-4529292:-|nuORF'] 111806 18753 TLRFAEFEDFP True PC9_epitope_Rep1 1370.6506667251397 1370.6495699358602 76.921 2 -0.927827270810361 0.27955315573431777 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000468018.5_1_2:242577129-242590612:+|nuORF', 'ENST00000494465.5_1_2:242577129-242592771:+|nuORF', 'ENST00000430617.6_3_2:242577147-242592771:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 66881 5926 LSWLPDNSD True PC9_epitope_Rep5 1045.47163973401 1045.4705499358602 27.789 2 -0.9278426142723086 0.27955315573431777 1.0 ['ENSG00000104804|ENST00000221399|TULP2'] 78292 16471 PASDTYVVFGE True H1975_Epitope_Rep3 1183.53971929383 1183.5386299358602 68.844 2 -0.9279164706972122 0.2795989201696876 1.0 ['ENSG00000136274|ENST00000490531|NACAD'] 24874 317 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 1.6944 2 -0.9279453080111528 0.2795989201696876 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 32121 10046 GEYPHHHNCHH True PC9_epitope_Rep5 1366.5373853917404 1366.5362899358602 43.621 2 -0.9279764164881122 0.2795989201696876 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11'] 43236 12136 IHAEATVHLL True PC9_epitope_Rep1 1102.61349337078 1102.6123899358602 51.543 2 -0.9280252547290893 0.2795989201696876 1.0 ['ENSG00000171811|ENST00000368586|CFAP46', 'CFAP46|p.T2005Qfs*24|1|0.32|ENSG00000171811|chr10:132847262-132847262|G/-|frameshift_variant'] 97375 764 SGCACGCGCE True NCI_RA007_Epitope_Rep1 888.2234302612 888.22232993586 4.0602 2 -0.928036579166425 0.2795989201696876 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 92752 23346 RRKLRMLAL True PC9_epitope_Rep5 1155.7386513975898 1155.73699490379 94.782 3 -0.9280467060410615 0.2795989201696876 1.0 ['ENST00000596769.1_1_19:53510963-53514048:+|nuORF'] 24416 8225 FAGAVKAN True NCI_RA007_Epitope_Rep5 776.41808803952 776.41698993586 38.316 2 -0.9280767884569615 0.27960884236622824 1.0 ['ENSG00000180071|ENST00000399703|ANKRD18A', 'nc|ENSG00000180071|Q8IVF6-2|ANKRD18A'] 137063 6949 YLAEVAC[Carbamidomethyl]GDDR True H1975_Epitope_Rep3 1267.5503013403 1267.54920993586 31.691 2 -0.928098076843126 0.27961876428945265 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ'] 128552 15597 VSHRGKTL True NCI_RA007_Epitope_Rep3 896.5191990631199 896.51810993586 68.935 2 -0.9281403087772426 0.27964245871610177 1.0 ['ENSG00000108932|ENST00000580666|SLC16A6'] 74356 10800 NISCKASQDI True PC9_epitope_Rep4 1077.5124590001699 1077.51136993586 49.301 2 -0.9281552608159314 0.2796645182614444 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 63856 11575 LPTTLLTA True H1975_Epitope_Rep2 828.49566965388 828.49456993586 49.588 2 -0.9281890250768658 0.2796645182614444 1.0 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586', 'ENST00000557392.1_1_14:58975310-58987641:+|nuORF'] 43060 15069 IGGTVLNIS True PC9_epitope_Rep1 872.4967322830399 872.49562993586 62.782 2 -0.9281929968202403 0.2796645182614444 1.0 ['ENST00000396503.7_1_16:11931646-11945380:-|nuORF', 'ENSG00000171490|ENST00000571133|RSL1D1'] 131497 22470 VVVDEKPFL True PC9_epitope_Rep4 1044.5855472874398 1044.5844499358602 94.661 2 -0.9282003608827621 0.2796645182614444 1.0 ['nc|ENSG00000158813|Q92838-9|EDA', 'nc|ENSG00000158813|Q92838-3|EDA', 'ENSG00000158813|ENST00000374552|EDA'] 127600 24552 VRAAHLRL True NCI_RA007_Epitope_Rep3 934.58246802602 934.58136993586 106.22 2 -0.9282522344399097 0.2796645182614444 1.0 ['ENST00000340634.4_1_3:142681054-142682041:-|nuORF'] 22282 8986 ETDRKFREEEQ True H1975_Epitope_Rep1 1465.67973500729 1465.67862993586 39.471 2 -0.928261448078901 0.27967443846143253 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 62303 21683 LLQQRLLL True PC9_epitope_Rep5 995.64915060351 995.64804993586 88.451 2 -0.9282918262214926 0.27968050678234524 1.0 ['ENST00000359486.7_2_22:42575622-42575670:-|nuORF', 'ENST00000204005.13_1_19:41129584-41129844:+|nuORF'] 24961 2951 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 16.53 2 -0.9282986346854242 0.27968050678234524 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 3679 11650 AGRRVAELDPV True H1975_Epitope_Rep3 1181.6516697846498 1181.6505699358602 49.946 2 -0.9283061375705024 0.2796865747689935 1.0 ['ENSG00000101493|ENST00000443185|ZNF516', 'ZNF516|p.P568Qfs*10|2|0.29|ENSG00000101493|chr18:76441348-76441352|GCTGG/-|frameshift_variant'] 80616 24953 PLPHRRGG True NCI_RA007_Epitope_Rep3 888.5042177053199 888.50312993586 107.88 2 -0.9283264004366285 0.2796865747689935 1.0 ['ENST00000272849.7_2_2:206610606-206614560:+|nuORF'] 8035 6108 ATDVGKRN True NCI_RA007_Epitope_Rep5 859.4511790729499 859.45008993586 30.175 2 -0.9283974448748864 0.27973780605359555 1.0 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 93227 23295 RRRRRRRHC True PC9_epitope_Rep6 1350.78643849206 1350.78534993586 102.71 2 -0.9284934935356345 0.279757642522721 1.0 ['ENST00000487413.1_1_3:50453473-50541058:-|nuORF'] 135140 7107 YAQLPPAP True PC9_epitope_Rep1 855.4490538146299 855.44794993586 32.146 2 -0.9285287714705442 0.279757642522721 1.0 ['PRDM13|p.G487Afs*4|1|0.22|ENSG00000112238|chr6:99614094-99614094|G/-|frameshift_variant', 'ENSG00000112238|ENST00000369215|PRDM13'] 111773 10116 TLQQIVSRSWK True NCI_RA007_Epitope_Rep1 1344.75138382592 1344.75028993586 43.359 2 -0.928566548847919 0.2797912478312357 1.0 ['ENST00000453654.6_3_7:137073903-137074059:-|nuORF'] 76739 6637 NTRTMEVP True H1975_Epitope_Rep2 946.4542158480599 946.45310993586 30.437 2 -0.9285669895318087 0.2797912478312357 1.0 ['nc|ENSG00000136059|O15195-2|VILL', 'ENSG00000136059|ENST00000383759|VILL'] 93379 5600 RRWEEHCSLWR True H1975_Epitope_Rep1 1556.7418988547197 1556.74024490379 26.607 3 -0.9287218363584757 0.2798920526518698 1.0 ['nc|ENSG00000156113|Q12791-7|KCNMA1'] 81840 10311 PSGTFLVRRHR True PC9_epitope_Rep3 1324.7476358581598 1324.74652993586 44.607 2 -0.9287311497629959 0.2798920526518698 1.0 ['ENST00000533685.1_1_11:64900480-64900579:-|nuORF'] 82860 18735 PVTVPVATT True PC9_epitope_Rep4 883.50148331031 883.5009349679301 80.147 1 -0.9287484259588813 0.2798920526518698 1.0 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 136609 4597 YIAWRRRGD True H1975_Epitope_Rep3 1191.62612374315 1191.62502993586 22.804 2 -0.9288057270280561 0.2798920526518698 1.0 ['ENST00000377811.3_1_X:47004102-47004276:-|nuORF'] 117480 9907 VAEEGLGPV True H1975_Epitope_Rep3 869.4494477374499 869.4488949679301 43.139 1 -0.9288384158931934 0.2798920526518698 1.0 ['ENST00000526977.5_1_8:145649272-145649818:-|nuORF'] 42716 6844 IEYPLFFLLPD True H1975_Epitope_Rep3 1365.72204076025 1365.72040490379 31.283 3 -0.9288493219428289 0.2798920526518698 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|228|3|anti-sense'] 140876 14029 YYTQELTKPNI True NCI_RA007_Epitope_Rep4 1368.6925315371195 1368.69142993586 61.246 2 -0.9288900413733845 0.27989426002671036 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 121408 8386 VGHSWPGP True NCI_RA007_Epitope_Rep5 835.3976869481098 835.39658993586 38.931 2 -0.9288928974925643 0.27989426002671036 1.0 ['ENST00000273814.7_1_4:953005-953860:-|nuORF'] 129789 22554 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 94.271 2 -0.9289088944230469 0.27989426002671036 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 29100 12349 FTQVWEAMVLY True H1975_Epitope_Rep1 1385.66895964157 1385.6678699358602 52.531 2 -0.9290077162224415 0.27993171054080845 1.0 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-2|CRYBG1'] 59094 5752 LGEDRHSCL True PC9_epitope_Rep4 1028.47092854136 1028.4698299358602 28.961 2 -0.9290667578589386 0.2799553921771096 1.0 ['LTR1_dup85|chr7:101629186-101629993:-|1.961039395768969|0.0003248618387484|12.56|495.0|9|2|sense'] 137384 11035 YLKYSKSFGP True PC9_epitope_Rep4 1188.6179100448799 1188.61627490379 50.222 3 -0.9291159681362309 0.27996530550430926 1.0 ['ENST00000566849.5_1_15:43653273-43656590:-|nuORF', 'nc|ENSG00000140265|Q8IWY8-4|ZSCAN29', 'nc|ENSG00000140265|Q8IWY8-2|ZSCAN29', 'ENSG00000140265|ENST00000684362|ZSCAN29'] 59123 18794 LGEKYDEWV True PC9_epitope_Rep6 1137.5342399905699 1137.5331499358601 84.932 2 -0.9292847297964814 0.28000275349349485 1.0 ['ENSG00000103089|ENST00000219368|FA2H'] 19 11495 AAAAALRAPAQ True H1975_Epitope_Rep1 1009.5668775315298 1009.56578993586 49.2 2 -0.9294084903504245 0.2800402004515667 1.0 ['ENSG00000083828|ENST00000396154|ZNF586', 'nc|ENSG00000083828|Q9NXT0-2|ZNF586'] 80279 10179 PLEAEFQRLP True PC9_epitope_Rep1 1198.6346227381798 1198.63352993586 44.03 2 -0.9294320880678147 0.2800638792901689 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 1906 4448 AEILPAMAMRP True H1975_Epitope_Rep2 1198.6202356273398 1198.61857490379 22.221 3 -0.9294851171971995 0.28008755747680275 1.0 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 49574 19972 KKKKEEKSKDK True NCI_RA007_Epitope_Rep2 1374.81946338574 1374.8178149037901 82.687 3 -0.9295409533455383 0.2800919552888057 1.0 ['ENSG00000198515|ENST00000514170|CNGA1'] 55978 16013 LDIDYMGEEQL True H1975_Epitope_Rep2 1324.58568351008 1324.58458993586 66.793 2 -0.9295493830080935 0.2800919552888057 1.0 ['nc|ENSG00000105048|P13805-2|TNNT1', 'nc|ENSG00000105048|P13805-3|TNNT1', 'ENSG00000105048|ENST00000588981|TNNT1'] 71502 27072 MKMLKRKWRTF True H1975_Epitope_Rep2 1523.85811490727 1523.8564649037899 111.74 3 -0.9295520696144205 0.2800919552888057 1.0 ['ENST00000577944.5_2_17:80397520-80400257:+|nuORF'] 69323 14601 LVPPQDVVNK True PC9_epitope_Rep5 1107.62880908175 1107.6277099358601 61.164 2 -0.9295574280144364 0.2800919552888057 1.0 ['ENSG00000063169|ENST00000594866|BICRA'] 24933 3419 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 17.956 2 -0.9295677402455713 0.2800919552888057 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 129790 22641 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 94.626 2 -0.9295718304638833 0.2800919552888057 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 59769 9370 LGYMYYVFLQ True PC9_epitope_Rep6 1295.62603220043 1295.62438490379 46.234 3 -0.9296360569102956 0.28011397266307864 1.0 ['nc|ENSG00000184307|Q8IYP9|ZDHHC23', 'ENSG00000184307|ENST00000638807|ZDHHC23'] 3734 10979 AGSTPRIQGL True PC9_epitope_Rep5 998.5508931142199 998.54978993586 47.22 2 -0.9296390142253659 0.28011397266307864 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 99469 13290 SLELYHQL True PC9_epitope_Rep5 1001.51819600361 1001.51708993586 56.131 2 -0.9296414121647607 0.28011397266307864 1.0 ['SETD6-IFT172|2|fusion', 'SETD6-IFT172|1|fusion', 'SETD6|p.A218D|1|0.4|ENSG00000103037|chr16:58516654-58516654|C/A|missense_variant', 'ENST00000467320.1_1_16:58550403-58550922:+|nuORF', 'nc|ENSG00000103037|Q8TBK2-2|SETD6', 'ENSG00000103037|ENST00000219315|SETD6'] 19524 9118 ELQQITWQTF True H1975_Epitope_Rep3 1292.6401020414398 1292.63900993586 40.061 2 -0.9296622284231787 0.28011397266307864 1.0 ['ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion', 'nc|ENSG00000069667|P35398-4|RORA', 'ENSG00000069667|ENST00000335670|RORA', 'nc|ENSG00000069667|P35398-3|RORA', 'nc|ENSG00000069667|P35398-1|RORA', 'RORA|p.E293G|1|0.5|ENSG00000069667|chr15:60505572-60505572|T/C|missense_variant'] 66550 18061 LSSIHPSLP True PC9_epitope_Rep1 949.52328138405 949.52218993586 74.264 2 -0.9296650213604518 0.28011397266307864 1.0 ['ENST00000426654.6_1_16:69733899-69734280:+|nuORF'] 92596 22603 RRDWKTLRRRT True PC9_epitope_Rep6 1542.8967597033397 1542.89512490379 99.984 3 -0.9296947102719142 0.28011617023619445 1.0 ['MYOM3|p.R248Afs*30|1|0.13|ENSG00000142661|chr1:24097926-24097926|G/-|frameshift_variant', 'ENST00000475306.1_1_1:24410803-24434643:-|nuORF', 'nc|ENSG00000142661|Q5VTT5-2|MYOM3', 'MYOM3|p.A1158Qfs*70|2|0.24|ENSG00000142661|chr1:24065953-24065953|C/-|frameshift_variant', 'ENSG00000142661|ENST00000374434|MYOM3'] 76826 5052 NVFHKTSVI True NCI_RA007_Epitope_Rep5 1043.57637958607 1043.5752899358602 26.132 2 -0.9296959641395095 0.28011617023619445 1.0 ['ENSG00000036530|ENST00000261835|CYP46A1'] 81832 17270 PSGMRTRCVWS True PC9_epitope_Rep2 1278.59614613782 1278.59449490379 71.688 3 -0.9296994376607375 0.28011617023619445 1.0 ['RIF1|p.Q2166R|1|0.28|ENSG00000080345|chr2:151466017-151466017|A/G|missense_variant'] 48233 15582 KDDDKAWEY True H1975_Epitope_Rep2 1168.5036681382799 1168.5020249037902 65.092 3 -0.9298310010474494 0.2801811349841025 1.0 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 80354 8865 PLGILRFAPP True H1975_Epitope_Rep3 1079.64915060351 1079.6480499358602 39.101 2 -0.9298610301259886 0.2801871860161035 1.0 ['nc|ENSG00000172824|Q5XG92-5|CES4A', 'nc|ENSG00000172824|Q5XG92-8|CES4A', 'nc|ENSG00000172824|Q5XG92-2|CES4A', 'ENSG00000172824|ENST00000648724|CES4A'] 58600 4858 LFFFLLVFSK True NCI_RA007_Epitope_Rep2 1259.7318175983098 1259.7301649037902 23.52 3 -0.9298814396299702 0.2801871860161035 1.0 ['ENST00000532312.2_1_11:118995018-118995186:+|nuORF'] 108736 12575 TEMRVISL True PC9_epitope_Rep3 947.5110024481899 947.50990993586 53.392 2 -0.9298966924171936 0.28018938038481656 1.0 ['ENSG00000165633|ENST00000332853|VSTM4'] 41612 13781 IDFYLKYL True H1975_Epitope_Rep3 1073.5797336310097 1073.5786299358601 58.312 2 -0.9299109604997577 0.28018938038481656 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'nc|ENSG00000138468|Q9BQF6-4|SENP7', 'ENST00000460107.1_1_3:101056351-101059081:-|nuORF', 'ENST00000474906.2_1_6:76388527-76407234:+|nuORF', 'nc|ENSG00000112701|Q9GZR1-2|SENP6', 'ENSG00000112701|ENST00000447266|SENP6'] 120469 23442 VFVIYKFKRR True H1975_Epitope_Rep1 1354.8237609205398 1354.8226699358602 97.416 2 -0.9299198361513872 0.28018938038481656 1.0 ['ENSG00000108018|ENST00000263054|SORCS1'] 60274 11838 LIEKVSLIIF True NCI_RA007_Epitope_Rep1 1173.7372969015698 1173.73564490379 50.029 3 -0.9299520310297202 0.28020148082904406 1.0 ['ENST00000490698.5_1_4:75026043-75026154:+|nuORF'] 123773 7197 VISNKCDG True NCI_RA007_Epitope_Rep2 834.3905529623399 834.39000496793 32.616 1 -0.9299594868649826 0.28020148082904406 1.0 ['MTMR4|p.V814Ffs*13|1|0.16|ENSG00000108389|chr17:58495702-58495702|C/-|frameshift_variant', 'nc|ENSG00000108389|Q9NYA4|MTMR4', 'ENSG00000108389|ENST00000682306|MTMR4'] 36134 17367 GVERRRTRPR True NCI_RA007_Epitope_Rep4 1281.74903284049 1281.7479299358602 75.212 2 -0.9300630553368608 0.28020148082904406 1.0 ['ENST00000308110.8_1_11:65628088-65628496:+|nuORF'] 54682 6422 LAEAVRVPG True H1975_Epitope_Rep3 910.5236157372199 910.52250993586 29.68 2 -0.9300667107406525 0.28020148082904406 1.0 ['ENST00000430334.7_1_17:43555439-43559860:-|nuORF'] 34321 12062 GPQTQLCI True PC9_epitope_Rep5 858.4269384710599 858.42584993586 51.392 2 -0.9301298810199751 0.2802174361797289 1.0 ['ENST00000489288.6_1_12:2986423-2994675:+|nuORF', 'ENST00000461997.5_1_12:2986378-2997084:+|nuORF', 'ENST00000538636.5_3_12:2986404-2994675:+|nuORF'] 70747 13869 MEAVVSEPSA True PC9_epitope_Rep5 1018.4641118254199 1018.46300993586 58.369 2 -0.9301359719927921 0.2802174361797289 1.0 ['nc|ENSG00000187642|Q5SV97-3|PERM1', 'ENSG00000187642|ENST00000433179|PERM1'] 51830 9573 KKKMNEKRKR True NCI_RA007_Epitope_Rep4 1344.8136072429995 1344.8125099358601 43.668 2 -0.9301363946507716 0.2802174361797289 1.0 ['nc|ENSG00000111364|Q8NHQ9-2|DDX55', 'ENSG00000111364|ENST00000238146|DDX55'] 98894 3363 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 18.97 2 -0.9301501628482014 0.2802273415352434 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 125895 4235 VNTDSVHTQIQ True H1975_Epitope_Rep1 1240.6047791618798 1240.60368993586 21.253 2 -0.9301864663456577 0.28024548656979303 1.0 129791 22726 VTKVLKGKKL True H1975_Epitope_Rep3 1112.76451470892 1112.7634099358602 94.965 2 -0.9302048876972452 0.28024548656979303 1.0 ['ENSG00000100196|ENST00000216014|KDELR3'] 96152 19873 SEEEELVELL True PC9_epitope_Rep2 1188.5761643721999 1188.57451490379 81.835 3 -0.9302188934739696 0.28024548656979303 1.0 ['RBM28|p.G352V|1|0.14|ENSG00000106344|chr7:128330893-128330893|C/A|missense_variant'] 52122 21265 KLRSATASRRG True PC9_epitope_Rep6 1201.7003513125699 1201.69924993586 94.649 2 -0.9302324941428446 0.28024548656979303 1.0 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 46634 10524 ITTRPNRIYMT True H1975_Epitope_Rep3 1364.7234548259198 1364.7223499358602 45.546 2 -0.9302500010679092 0.28024548656979303 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 94204 11454 RWNSRPLS True PC9_epitope_Rep6 1014.5359117564199 1014.53480993586 55.118 2 -0.9302526611163895 0.28024548656979303 1.0 ['ENSG00000145975|ENST00000274673|FAM217A'] 79686 20898 PHLIYRQD True PC9_epitope_Rep1 1040.54032843052 1040.53922993586 85.205 2 -0.9303102334023096 0.2802674848989364 1.0 ['nc|ENSG00000173157|P59510-2|ADAMTS20', 'nc|ENSG00000173157|P59510|ADAMTS20', 'ENSG00000173157|ENST00000389420|ADAMTS20'] 130650 23888 VVAVAGTIIL True NCI_RA007_Epitope_Rep4 954.61136811246 954.61026993586 103.62 2 -0.930316004287854 0.2802674848989364 1.0 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 130050 17011 VTPWEVTG True PC9_epitope_Rep5 887.4388830537499 887.43778993586 70.452 2 -0.930333999857724 0.2802674848989364 1.0 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|25|2|sense'] 93133 18644 RRRRGRVH True NCI_RA007_Epitope_Rep5 1091.6649092937098 1091.6638099358602 78.526 2 -0.9303362234789165 0.2802674848989364 1.0 ['ENST00000260643.6_1_2:27357356-27357503:-|nuORF'] 19926 17326 ELYHYTDSTV True PC9_epitope_Rep5 1226.5455329502602 1226.54389490379 71.643 3 -0.9303733641865003 0.2802674848989364 1.0 ['NID2|p.S673T|1|0.65|ENSG00000087303|chr14:52040660-52040660|A/T|missense_variant'] 36277 20034 GVGLSLGLLLQ True PC9_epitope_Rep3 1068.6542955536 1068.6531899358602 82.31 2 -0.9303869961658428 0.2802696752889378 1.0 ['ENSG00000174804|ENST00000531380|FZD4'] 37687 6401 HALNEVDPG True PC9_epitope_Rep1 950.4457593393399 950.44466993586 29.429 2 -0.9303936174828865 0.2802696752889378 1.0 ['ENSG00000142207|ENST00000382751|URB1'] 2971 7222 AFKGAQAG True PC9_epitope_Rep1 748.3867879112398 748.38568993586 32.593 2 -0.9304230881807831 0.2802696752889378 1.0 ['SLC4A2|p.S187F|1|0.22|ENSG00000164889|chr7:151064948-151064948|C/T|missense_variant'] 27257 23890 FLWKKKLRQ True NCI_RA007_Epitope_Rep5 1245.7709970716899 1245.7693649037901 99.26 3 -0.930474338192227 0.2802757216367189 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000545213.5_1_14:24789074-24794639:-|nuORF', 'ENST00000557056.5_1_14:24787624-24791466:-|nuORF'] 134241 20694 WRRRPRTRR True NCI_RA007_Epitope_Rep2 1338.7969860924197 1338.79588993586 85.581 2 -0.9304886414000975 0.2802757216367189 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 130651 25056 VVAVAGTIIL True NCI_RA007_Epitope_Rep5 954.61136811246 954.61026993586 103.88 2 -0.9305609930058711 0.2803054275297517 1.0 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 38280 13455 HFGQWWTGKL True PC9_epitope_Rep5 1258.6247267608198 1258.62307490379 56.77 3 -0.9305652860967775 0.2803054275297517 1.0 ['ENST00000428945.1_1_1:15929692-15930004:-|nuORF'] 65236 8421 LSEELAIQLD True PC9_epitope_Rep3 1129.5866694862498 1129.5855699358601 37.356 2 -0.9305738353917014 0.2803054275297517 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant'] 4750 12404 ALEDLKFLPE True NCI_RA007_Epitope_Rep2 1173.6281403754099 1173.6270499358602 52.857 2 -0.9306305895571224 0.2803389877144469 1.0 ['ENST00000216019.11_1_22:38885294-38885507:-|nuORF'] 61265 10030 LLDSLDKYFQ True H1975_Epitope_Rep1 1240.6339540318402 1240.6328499358601 43.519 2 -0.9306315042078208 0.2803389877144469 1.0 ['ENST00000568495.5_1_16:67862172-67864127:-|nuORF'] 60320 16243 LIFRRRPRQK True H1975_Epitope_Rep1 1368.8578550134796 1368.85674993586 67.829 2 -0.9306772741377947 0.2803488883997359 1.0 ['ENSG00000172375|ENST00000648610|C2CD2L', 'nc|ENSG00000172375|O14523-2|C2CD2L'] 15291 10984 EAHRFHFDA True NCI_RA007_Epitope_Rep2 1128.5100909314 1128.5089899358602 47.333 2 -0.9306864577789793 0.2803549319026001 1.0 ['ENSG00000129636|ENST00000320640|ITFG1', 'ENST00000567957.1_1_16:47189632-47271941:-|nuORF'] 130652 24878 VVAVAGTIIL True NCI_RA007_Epitope_Rep5 954.61136811246 954.61026993586 103.19 2 -0.9307054012856247 0.2803549319026001 1.0 ['EPHA7|p.D916Ifs*40|1|0.17|ENSG00000135333|chr6:93245434-93245434|C/-|frameshift_variant', 'nc|ENSG00000135333|Q15375-2|EPHA7', 'nc|ENSG00000135333|Q15375-4|EPHA7', 'ENSG00000135333|ENST00000369303|EPHA7'] 54769 19789 LAESIVAQA True PC9_epitope_Rep3 900.4916469025999 900.49054993586 81.349 2 -0.9307474927989062 0.28036483195994 1.0 ['nc|ENSG00000159753|Q6F5E8-2|CARMIL2', 'ENSG00000159753|ENST00000334583|CARMIL2', 'ENST00000602321.5_1_16:67685803-67685989:+|nuORF'] 118443 8759 VDPVGNNY True PC9_epitope_Rep4 876.39774651776 876.39664993586 41.199 2 -0.9307783334833916 0.2803747317448963 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant'] 59629 22521 LGSKQMQQI True PC9_epitope_Rep5 1031.54336520563 1031.54226993586 91.631 2 -0.930858123954781 0.28042590070570755 1.0 ['ENST00000588088.1_1_18:57491253-57491433:+|nuORF'] 77796 14296 PAELHLSLS True PC9_epitope_Rep4 965.51819600361 965.51708993586 62.89 2 -0.9309412367964067 0.28043579937821556 1.0 ['ENSG00000197587|ENST00000360032|DMBX1', 'nc|ENSG00000197587|Q8NFW5|DMBX1'] 15624 12794 EAVSLQIVT True PC9_epitope_Rep1 958.53351171458 958.53240993586 54.087 2 -0.9309711084109359 0.2804456977783892 1.0 ['ENST00000497184.5_1_7:44089925-44090420:+|nuORF'] 64481 17979 LQVKMYFRRI True NCI_RA007_Epitope_Rep4 1352.77509647596 1352.77345490379 77.794 3 -0.9310673299836463 0.2804831077363266 1.0 ['ENSG00000184995|ENST00000448696|IFNE'] 4660 2812 ALCWHLQMLAK True NCI_RA007_Epitope_Rep1 1312.6784192098 1312.6767749037901 14.776 3 -0.9311017736882021 0.2804930052134201 1.0 ['ENSG00000254470|ENST00000532090|AP5B1', 'ENST00000316846.2_11:65545618-65547282:-|nuORF'] 68454 9085 LTTVEEAPR True H1975_Epitope_Rep3 1014.5345743437398 1014.53346993586 39.933 2 -0.9311185922153506 0.2805127993507476 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2', 'ENST00000460924.6_1_11:112046255-112064455:+|nuORF', 'ENSG00000197580|ENST00000357685|BCO2', 'ENST00000525987.5_1_11:111959732-112064455:+|nuORF', 'nc|ENSG00000197580|Q9BYV7-4|BCO2', 'nc|ENSG00000197580|Q9BYV7-2|BCO2'] 10157 26165 CCCCCGGG True H1975_Epitope_Rep2 704.1208797689599 704.1203249679301 107.54 1 -0.9311503385009471 0.2805127993507476 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 102539 11301 SQAHRNFLEDG True H1975_Epitope_Rep1 1272.58471242364 1272.58417496793 48.446 1 -0.9311761679373963 0.2805149789551869 1.0 ['ENSG00000116209|ENST00000234831|TMEM59'] 110504 8122 TIQEYQRY True H1975_Epitope_Rep1 1099.52982331647 1099.52927496793 36.186 1 -0.9311996313100002 0.2805149789551869 1.0 ['ENST00000555759.1_1_14:95918480-95934190:-|nuORF'] 45409 5620 ISDRYGAP True PC9_epitope_Rep1 877.4293809992099 877.42828993586 26.443 2 -0.9312068127177907 0.2805149789551869 1.0 ['ENSG00000170788|ENST00000372202|DYDC1', 'nc|ENSG00000170788|Q8WWB3-2|DYDC1'] 45921 17265 ISRVECPL True PC9_epitope_Rep1 915.4847877003499 915.48368993586 71.228 2 -0.931224492739371 0.2805270541633428 1.0 ['ENST00000554577.5_1_14:24791640-24799178:-|nuORF'] 78731 18804 PEFLRPVPQ True PC9_epitope_Rep4 1081.5920296502097 1081.59092993586 80.415 2 -0.9312254287981245 0.2805270541633428 1.0 ['ENSG00000171236|ENST00000306390|LRG1'] 99770 20873 SLGNGRWML True PC9_epitope_Rep5 1032.51748481096 1032.5163899358602 85.341 2 -0.9312324456064819 0.2805270541633428 1.0 ['ENST00000472031.1_1_17:40118826-40125939:+|nuORF', 'ENST00000486438.1_1_17:40123824-40125939:+|nuORF', 'nc|ENSG00000173786|P09543-2|CNP', 'ENSG00000173786|ENST00000393892|CNP'] 45705 21920 ISLMRAKRF True PC9_epitope_Rep5 1120.65391871412 1120.6528299358602 89.357 2 -0.9312510131002657 0.2805270541633428 1.0 ['ENST00000323883.11_1_10:22839601-22839673:-|nuORF'] 140032 22224 YVLPSFEVI True PC9_epitope_Rep1 1065.57464825057 1065.57354993586 90.308 2 -0.9313036739326532 0.2805369496747218 1.0 ['ENSG00000125730|ENST00000245907|C3', 'C3|p.K263Rfs*40|2|0.22|ENSG00000125730|chr19:6713497-6713497|C/-|frameshift_variant'] 85588 16098 QLLREQWIRAK True H1975_Epitope_Rep3 1439.83611650939 1439.8350099358602 67.379 2 -0.9313388186013808 0.2805468449139022 1.0 ['nc|ENSG00000105963|O75689-3|ADAP1', 'ENSG00000105963|ENST00000265846|ADAP1', 'nc|ENSG00000105963|O75689-2|ADAP1'] 64759 27489 LRRRRFKMRRM True PC9_epitope_Rep5 1604.9456415553998 1604.9440049037898 112.86 3 -0.931365540196773 0.28056663457571174 1.0 ['ENSG00000023171|ENST00000635736|GRAMD1B'] 80370 19431 PLGQLEPV True PC9_epitope_Rep3 851.47526856247 851.47472496793 79.967 1 -0.9313730257743389 0.28056663457571174 1.0 ['ENST00000484513.1_1_3:38180924-38181542:+|nuORF'] 62514 9996 LLSTIVLA True H1975_Epitope_Rep1 828.5320551625999 828.53094993586 43.386 2 -0.9314106253136475 0.28059028207561443 1.0 ['ENST00000409465.5_1_2:191878499-191878559:-|nuORF'] 16632 5271 EESLVDDSLLQ True H1975_Epitope_Rep1 1246.5928770655 1246.59178993586 25.339 2 -0.9314171184965182 0.280592951142036 1.0 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 123463 13909 VIFLSADG True NCI_RA007_Epitope_Rep5 820.4330693973199 820.43252496793 60.182 1 -0.9314600345961314 0.280592951142036 1.0 ['ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant'] 30740 16748 GANRKFPTLL True PC9_epitope_Rep5 1115.64512785223 1115.64402993586 69.427 2 -0.9314952597735948 0.280592951142036 1.0 ['ENST00000530083.1_1_11:777645-783680:+|nuORF'] 93566 20661 RSRRRTHHWQH True NCI_RA007_Epitope_Rep2 1555.80934168127 1555.8082499358602 85.454 2 -0.9315294104309674 0.280592951142036 1.0 ['MBD6|p.P907R|1|0.14|ENSG00000166987|chr12:57528460-57528460|C/G|missense_variant'] 112646 6622 TPEQYYFCY True H1975_Epitope_Rep2 1212.47976188956 1212.4786699358601 30.379 2 -0.9315318558167653 0.280592951142036 1.0 ['ENSG00000169410|ENST00000618819|PTPN9'] 55780 15761 LDEFRALL True PC9_epitope_Rep5 975.5389314481898 975.53782993586 65.619 2 -0.9315451649911177 0.280592951142036 1.0 ['ENST00000540418.5_1_12:68690747-68696570:-|nuORF'] 59462 14960 LGNLTLAP True PC9_epitope_Rep1 797.4647038787699 797.46360993586 62.365 2 -0.9315623086092842 0.280592951142036 1.0 ['ENST00000436103.1_22:24376175-24376421:-|nuORF'] 110580 15455 TISLIIRCP True PC9_epitope_Rep3 1014.5895871220599 1014.58848993586 64.6 2 -0.9315700751587472 0.280592951142036 1.0 ['ASTN1|p.L1114P|1|0.18|ENSG00000152092|chr1:176882880-176882880|A/G|missense_variant'] 15374 11677 EALLSNIVKPV True H1975_Epitope_Rep1 1181.70197402201 1181.70086993586 49.905 2 -0.9315863633142554 0.280592951142036 1.0 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 114745 12924 TSVLEANSKI True PC9_epitope_Rep4 1060.57643915572 1060.57534993586 57.597 2 -0.9315875662182656 0.280592951142036 1.0 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 101290 9339 SLWWLACPD True PC9_epitope_Rep1 1089.49535238405 1089.4942499358601 40.78 2 -0.9316197634627112 0.28060284370616867 1.0 ['ENST00000338560.11_1_17:16318878-16320981:+|nuORF'] 140877 14335 YYTQELTKPNI True NCI_RA007_Epitope_Rep5 1368.6925315371195 1368.69142993586 61.83 2 -0.9316283347157146 0.2806127359982399 1.0 ['ENSG00000206043|ENST00000579455|C18orf63'] 92667 15957 RRGIIPTE True NCI_RA007_Epitope_Rep5 940.54541381096 940.54430993586 68.104 2 -0.9318514046640055 0.28067980254925956 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'ENST00000443361.1_1_9:108287470-108288637:+|nuORF'] 136321 7578 YHAADLSL True PC9_epitope_Rep2 888.43413202648 888.43302993586 34.518 2 -0.9318614808311378 0.28067980254925956 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 10158 26244 CCCCCGGG True H1975_Epitope_Rep2 704.1208797689599 704.1203249679301 107.93 1 -0.9318786344331332 0.28067980254925956 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 54820 12581 LAFLGKSVGP True PC9_epitope_Rep2 987.5753169569099 987.57420993586 53.699 2 -0.9318864708558896 0.28067980254925956 1.0 ['ENST00000336798.11_2_1:31344819-31345005:-|nuORF'] 119019 16018 VEFWGPPL True PC9_epitope_Rep1 943.4803539429098 943.47924993586 66.426 2 -0.9320030123334522 0.28070006599208097 1.0 ['ENST00000561346.5_1_15:57524542-57524910:+|nuORF'] 24955 23191 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 96.875 2 -0.9320073708343368 0.28070006599208097 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 29903 9592 FWDQWYLWYLR True NCI_RA007_Epitope_Rep1 1674.7983340183398 1674.79669490379 41.307 3 -0.9320151062013294 0.28070006599208097 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 91331 27286 RMKKKKKLLPF True PC9_epitope_Rep3 1415.91628140639 1415.91463490379 112.35 3 -0.9320314825956747 0.28070006599208097 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 82897 19201 PVYMGMHPII True PC9_epitope_Rep5 1156.5773081861998 1156.57620993586 78.897 2 -0.932046061193183 0.28070006599208097 1.0 ['ENST00000288937.6_1_11:6702876-6703137:-|nuORF'] 83153 7906 PYSIMRSV True PC9_epitope_Rep1 951.48478770035 951.48368993586 35.237 2 -0.9320591176470183 0.28070006599208097 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 100222 7154 SLLNDAVTV True PC9_epitope_Rep3 930.5022115863 930.50110993586 32.53 2 -0.9320682537388854 0.28070006599208097 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3', 'ENSG00000066230|ENST00000264938|SLC9A3', 'ENST00000564812.5_1_16:67286693-67289803:+|nuORF', 'ENST00000564704.5_1_16:67272241-67289541:+|nuORF', 'ENSG00000135740|ENST00000299798|SLC9A5', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 90778 20845 RKRRGGGGGG True PC9_epitope_Rep6 956.5376430919196 956.53654993586 92.953 2 -0.9320773169641535 0.28070006599208097 1.0 ['ENST00000605920.1_1_10:81586022-81586202:+|nuORF'] 131725 18046 VWVWVCLRRRL True NCI_RA007_Epitope_Rep3 1484.8550781321599 1484.85343490379 79.08 3 -0.9320832167353231 0.28070006599208097 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 91028 17998 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 74.751 2 -0.9321557621869808 0.280706095850862 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 124956 18368 VLMIRMLR True NCI_RA007_Epitope_Rep4 1030.61436240126 1030.6132699358602 79.462 2 -0.9321795900327936 0.280706095850862 1.0 ['nc|ENSG00000164251|P55085|F2RL1', 'ENSG00000164251|ENST00000296677|F2RL1'] 40709 6325 HTQTPPQK True NCI_RA007_Epitope_Rep3 935.4824792012299 935.48138993586 31.883 2 -0.9322592771435524 0.28072201371991035 1.0 ['ENSG00000168769|ENST00000380013|TET2', 'nc|ENSG00000168769|Q6N021-2|TET2', 'nc|ENSG00000168769|Q6N021-3|TET2'] 96270 4636 SEERLCLAA True PC9_epitope_Rep4 990.4804305958999 990.47932993586 24.351 2 -0.9322623654773264 0.28072201371991035 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|20|2|sense', 'chr5:76812310-76832690|245|10.41|0.13|6.32|+|0|TE_info:SVA_D,SVA_D_dup452,SVA,Retroposon,donor,+,76811569,76812310|None,F2RL1|4', 'SVA_F_dup909|chr19:40117193-40118408:+|1.1615710171716431|0.2301661439299303|2.34|469.0|6|1|sense', 'SVA_F_dup805|chr16:56739964-56741004:-|1.3784163950761863|0.1539008476170439|3.16|494.0|14|2|sense', 'SVA_F_dup909|chr19:40117193-40118408:+|1.1615710171716431|0.2301661439299303|2.34|469.0|4|1|sense', 'SVA_D_dup775|chrX:71340697-71342586:-|1.2848477161067438|0.0874932661462981|3.88|488.0|22|2|sense', 'SVA_D_dup572|chr7:13101975-13103665:+|1.6639664035240398|0.0779356966125725|4.42|449.0|15|2|sense', 'SVA_D_dup517|chr6:34785776-34787536:+|1.8458154546262728|0.1042097672883524|4.15|465.0|36|3|sense', 'SVA_D_dup280|chr3:48733473-48735453:+|1.022591360821104|0.241565249229772|2.08|482.0|41|3|sense', 'SVA_D_dup132|chr1:226114299-226115980:-|1.3983671137746794|0.0922211982552955|3.92|465.0|3|1|sense', 'SVA_D_dup1026|chr13:30838585-30840641:-|4.257143864425426|0.3514679219565426|3.6|489.0|16|2|sense', 'SVA_C_dup26|chr1:153574460-153575981:+|1.9575035595213544|0.0744788955417672|4.72|476.0|4|1|sense', 'SVA_C_dup119|chr4:183818089-183819596:-|1.7262149826194688|0.0479649960045823|5.17|467.0|30|3|sense', 'SVA_A_dup7|chr1:24031430-24032897:-|1.134990603868384|0.1232159385352189|3.2|454.0|4|1|sense'] 64264 17188 LQLEQFRRHSL True PC9_epitope_Rep2 1425.7840809365298 1425.78298993586 71.372 2 -0.9322694312084809 0.28072201371991035 1.0 ['ENST00000442133.8_1_10:75256199-75264836:+|nuORF'] 100929 5237 SLSPEELSSVP True NCI_RA007_Epitope_Rep4 1143.56593404167 1143.5648299358602 26.683 2 -0.9323022753771888 0.28073190178988755 1.0 ['nc|ENSG00000102854|Q13421-4|MSLN', 'ENSG00000102854|ENST00000545450|MSLN', 'nc|ENSG00000102854|Q13421|MSLN', 'nc|ENSG00000102854|Q13421-2|MSLN'] 110841 20347 TKTNPCPE True NCI_RA007_Epitope_Rep3 888.4011176460399 888.40002993586 88.645 2 -0.9323471475304983 0.28076542395249093 1.0 ['chr16:16007992-16033109|156|10.76|0.19|5.8|+|0|ABCC1,ABCC1|1'] 3124 6970 AGDEVLEWNGK True NCI_RA007_Epitope_Rep2 1216.5724164044398 1216.5713099358602 31.732 2 -0.9323697497872492 0.28076542395249093 1.0 ['nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1', 'nc|ENSG00000079841|Q86UR5-10|RIMS1', 'RIMS1|p.P777Lfs*6|1|0.46|ENSG00000079841|chr6:72250417-72250417|C/-|frameshift_variant', 'nc|ENSG00000079841|Q86UR5-13|RIMS1', 'nc|ENSG00000079841|Q86UR5-9|RIMS1', 'nc|ENSG00000079841|Q86UR5-12|RIMS1', 'nc|ENSG00000079841|Q86UR5-2|RIMS1', 'ENST00000524197.1_1_6:72926891-72975792:+|nuORF'] 115440 12011 TVFILLGFFPP True H1975_Epitope_Rep1 1249.7110821537296 1249.7099899358602 51.208 2 -0.9323962533201338 0.28077145135127707 1.0 ['OR2L3|p.D10V|2|0.09|ENSG00000198128|chr1:248060710-248060710|A/T|missense_variant'] 19451 11683 ELPSSQNVSPA True H1975_Epitope_Rep1 1127.54586730343 1127.54527496793 49.928 1 -0.9323981186171427 0.28077145135127707 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 83820 6138 QEETKTVL True PC9_epitope_Rep4 946.4971262058599 946.49602993586 30.627 2 -0.9324121607615611 0.28078736477477356 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 81651 19598 PRSPRIRKRF True NCI_RA007_Epitope_Rep4 1311.8000057841898 1311.79837490379 84.687 3 -0.9324182381419435 0.28078736477477356 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 99281 5548 SLDEVHHK True NCI_RA007_Epitope_Rep4 963.4773938207901 963.47628993586 27.938 2 -0.932494054027071 0.28078736477477356 1.0 ['STIM2|p.D410H|1|0.15|ENSG00000109689|chr4:27008506-27008506|G/C|missense_variant'] 115792 16871 TVLWAIGRVP True PC9_epitope_Rep1 1110.6549642599398 1110.65386993586 69.719 2 -0.9325225592296137 0.2807972508591065 1.0 ['nc|ENSG00000184470|Q9NNW7-4|TXNRD2', 'nc|ENSG00000184470|Q9NNW7-3|TXNRD2', 'ENST00000494454.5_1_22:19864636-19903590:-|nuORF', 'ENST00000400518.5_2_22:19864636-19919892:-|nuORF', 'nc|ENSG00000184470|Q9NNW7-2|TXNRD2', 'ENST00000400525.6_1_22:19864636-19929326:-|nuORF', 'ENSG00000184470|ENST00000400521|TXNRD2'] 91334 27628 RMKKKKKLLPF True PC9_epitope_Rep5 1415.91628140639 1415.91463490379 113.6 3 -0.9325730664016979 0.28080713667166085 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 27123 20498 FLQQRMPTL True PC9_epitope_Rep5 1132.60629981536 1132.60520993586 83.885 2 -0.9325896902947306 0.28081702221244775 1.0 ['ENSG00000168143|ENST00000306858|FAM83B', 'FAM83B|p.M1000Ifs*12|1|0.2|ENSG00000168143|chr6:54941969-54941970|-/T|frameshift_variant'] 18575 18187 ELAAALNEF True PC9_epitope_Rep3 976.4865615221601 976.48546993586 75.165 2 -0.932676589373655 0.28083509717144506 1.0 ['nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'CTNNA2|p.D319Tfs*32|1|0.27|ENSG00000066032|chr2:79909694-79909694|C/-|frameshift_variant'] 98206 8690 SIDYEENK True H1975_Epitope_Rep3 996.4400052525599 996.43890993586 38.425 2 -0.9326979408489913 0.28083509717144506 1.0 ['ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.R3361Lfs*17|1|0.24|ENSG00000168702|chr2:140444655-140444656|-/A|frameshift_variant', 'LRP1B|p.P3359Qfs*54|1|0.29|ENSG00000168702|chr2:140444661-140444661|G/-|frameshift_variant', 'LRP1B|p.P3292Lfs*121|1|0.15|ENSG00000168702|chr2:140456543-140456543|G/-|frameshift_variant', 'LRP1B|p.C2689Ffs*8|1|0.18|ENSG00000168702|chr2:140516972-140516972|C/-|frameshift_variant', 'LRP1B|p.R2777Dfs*83|1|0.22|ENSG00000168702|chr2:140509997-140509997|G/-|frameshift_variant'] 12350 7195 DIWRKKYMRWM True NCI_RA007_Epitope_Rep2 1611.8166440181099 1611.8149949037902 32.608 3 -0.9327007267850081 0.28083509717144506 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 91332 27501 RMKKKKKLLPF True PC9_epitope_Rep5 1415.91628140639 1415.91463490379 112.92 3 -0.9327153818078318 0.28083509717144506 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 63698 7614 LPQEVPSMQD True H1975_Epitope_Rep1 1142.52777471114 1142.5266699358601 34.276 2 -0.9327224190493569 0.28083509717144506 1.0 ['nc|ENSG00000100767|O95428-4|PAPLN', 'nc|ENSG00000100767|O95428-6|PAPLN', 'nc|ENSG00000100767|O95428-5|PAPLN', 'ENSG00000100767|ENST00000644200|PAPLN'] 30310 7859 GADAGEQRGP True H1975_Epitope_Rep3 956.4311719043599 956.43006993586 35.205 2 -0.9327303987923458 0.28083509717144506 1.0 ['ENST00000366847.8_1_6:167412887-167413552:+|nuORF'] 45698 12032 ISLHKKNMAR True H1975_Epitope_Rep3 1196.6811960911198 1196.68008993586 51.442 2 -0.9327941041856438 0.28084498137687436 1.0 ['ENSG00000277481|ENST00000620267|PKD1L3'] 46778 11849 IVCVPSYLELW True NCI_RA007_Epitope_Rep2 1320.67879604928 1320.6776899358601 50.691 2 -0.9327995810425438 0.28085100534627067 1.0 ['ENSG00000102172|ENST00000404933|SMS', 'nc|ENSG00000102172|P52788-2|SMS'] 58259 11519 LETAITC[Carbamidomethyl]LSTV True PC9_epitope_Rep1 1206.6165899949701 1206.61548993586 49.186 2 -0.9328180893277782 0.28085100534627067 1.0 ['ENST00000400275.2_1_Y:15398697-15399255:+|nuORF'] 91328 27697 RMKKKKKLLPF True PC9_epitope_Rep1 1415.91628140639 1415.91463490379 113.57 3 -0.9328593353996428 0.28086088892553807 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 31859 13818 GEQAIRQIL True PC9_epitope_Rep4 1026.5821932425 1026.58108993586 61.047 2 -0.9329344625186226 0.28087679516250946 1.0 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL', 'VCL-ADK|1|fusion', 'VCL-ADK|4|fusion', 'VCL-ADK|13|fusion', 'VCL|p.S774Wfs*9|1|0.24|ENSG00000035403|chr10:74105240-74105243|CCGA/-|frameshift_variant', 'VCL-ADK|2|fusion'] 78293 4806 PASENTKAP True NCI_RA007_Epitope_Rep3 913.4505103666099 913.44940993586 25.87 2 -0.9329568231957607 0.28087679516250946 1.0 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'nc|ENSG00000065534|Q15746-11|MYLK', 'nc|ENSG00000065534|Q15746-7|MYLK', 'ENST00000504946.5_1_3:123400948-123419770:-|nuORF'] 26653 6702 FLAGGRPP True NCI_RA007_Epitope_Rep1 813.44972252097 813.44862993586 30.08 2 -0.9329573430315365 0.28087679516250946 1.0 ['ENSG00000116544|ENST00000373347|DLGAP3'] 44454 13519 INLPYLTMD True H1975_Epitope_Rep1 1078.53688284286 1078.53578993586 57.121 2 -0.9329675811128747 0.28089270008795075 1.0 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9', 'ENST00000432228.1_1_2:222826463-222827672:+|nuORF'] 77859 7134 PAGKVQIVS True PC9_epitope_Rep3 897.52836676449 897.52726993586 32.448 2 -0.932991113953048 0.28089270008795075 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 127282 18997 VQLGYSVLS True PC9_epitope_Rep6 964.5229470308799 964.52184993586 85.715 2 -0.9329969351520162 0.28089270008795075 1.0 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant', 'MDN1|p.Y2016F|1|0.24|ENSG00000112159|chr6:89719146-89719146|T/A|missense_variant'] 30159 12739 FYSERKQNRPF True NCI_RA007_Epitope_Rep5 1470.7367963909398 1470.7356899358601 55.666 2 -0.9330184776199781 0.2808987220008245 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 118390 6263 VDKYSGRNK True NCI_RA007_Epitope_Rep2 1065.55670677065 1065.55560993586 28.966 2 -0.9330429918346992 0.2808987220008245 1.0 ['ENSG00000134569|ENST00000378623|LRP4'] 41613 6911 IDGGAGGDSGT True H1975_Epitope_Rep3 905.37265396873 905.37154993586 31.543 2 -0.933143490191071 0.2809910541287051 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF', 'ENST00000368126.2_1_6:131179278-131186801:-|nuORF'] 27133 7303 FLRESRKVGP True NCI_RA007_Epitope_Rep2 1187.6774906096698 1187.67583490379 33.027 3 -0.933163283286022 0.28102069420397396 1.0 ['RET|p.G825C|1|0.33|ENSG00000165731|chr10:43119611-43119611|G/T|missense_variant', 'nc|ENSG00000165731|P07949-2|RET', 'ENSG00000165731|ENST00000355710|RET'] 102389 7266 SPVSPVKHD True PC9_epitope_Rep1 964.4977949122001 964.49668993586 32.761 2 -0.9331712875787653 0.28102069420397396 1.0 ['chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|90', 'chr15:53523322-53684228|265|18.12|0.04|8.74|-|2|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|79'] 92419 8701 RQRWFQLESSK True H1975_Epitope_Rep3 1463.7633454919498 1463.7622499358602 38.467 2 -0.9331868113620904 0.28102069420397396 1.0 ['ENST00000442074.1_1_7:78115917-78116193:+|nuORF'] 12522 7553 DLAKRRKHQIY True H1975_Epitope_Rep2 1426.8157154179798 1426.81405490379 34.006 3 -0.9333585768532704 0.2810503318356074 1.0 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5', 'CNTNAP5|p.V793Sfs*37|1|0.31|ENSG00000155052|chr2:124763992-124763992|C/-|frameshift_variant', 'CNTNAP5|p.G382Afs*10|1|0.23|ENSG00000155052|chr2:124504376-124504376|G/-|frameshift_variant', 'CNTNAP5|p.L464Sfs*40|1|0.35|ENSG00000155052|chr2:124524367-124524367|G/-|frameshift_variant'] 62764 22309 LMDDYLGLV True PC9_epitope_Rep4 1037.5103337418498 1037.5097749679298 94.051 1 -0.9333677049281914 0.2810503318356074 1.0 ['ENSG00000168002|ENST00000301788|POLR2G', 'ENST00000526368.1_1_11:62530297-62533976:+|nuORF', 'ENST00000527435.5_1_11:62529161-62533976:+|nuORF', 'ENST00000525455.5_1_11:62530233-62533976:+|nuORF'] 45288 6191 ISAGGYIK True PC9_epitope_Rep3 807.44905381463 807.44794993586 28.854 2 -0.9333714923459315 0.2810503318356074 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 98734 13023 SIRRWAYQMFR True NCI_RA007_Epitope_Rep1 1512.7772217342797 1512.7761299358601 54.65 2 -0.9334667444111018 0.2811134621197549 1.0 ['ACACB|p.E285Q|1|0.24|ENSG00000076555|chr12:109167962-109167962|G/C|missense_variant'] 42153 18575 IEETEQSKL True PC9_epitope_Rep4 1075.53971929383 1075.5386299358602 79.525 2 -0.933512640252902 0.2811134621197549 1.0 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000515226.5_1_5:71516738-71522904:-|nuORF'] 66145 13152 LSPDLSHTTL True PC9_epitope_Rep4 1082.56078909158 1082.5596899358602 58.485 2 -0.9335183256959798 0.2811134621197549 1.0 ['ENSG00000198734|ENST00000367797|F5'] 126549 6765 VPPFSAFSPQG True NCI_RA007_Epitope_Rep3 1132.5553097883198 1132.5536549037902 33.704 3 -0.93352667594433 0.2811134621197549 1.0 ['nc|ENSG00000086205|Q04609-6|FOLH1', 'nc|ENSG00000086205|Q04609-3|FOLH1', 'nc|ENSG00000086205|Q04609-9|FOLH1', 'nc|ENSG00000086205|Q04609-8|FOLH1', 'nc|ENSG00000086205|Q04609-7|FOLH1', 'ENSG00000086205|ENST00000256999|FOLH1', 'FOLH1|p.Q79Kfs*31|1|0.22|ENSG00000086205|chr11:49200431-49200431|G/TT|frameshift_variant', 'ENST00000529646.5_1_11:49214323-49229873:-|nuORF', 'nc|ENSG00000086205|Q04609-4|FOLH1'] 24240 6785 EYWRRREEEER True H1975_Epitope_Rep1 1636.7706157003602 1636.76950993586 31.142 2 -0.9335290280807141 0.2811134621197549 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 127863 17598 VRNSPTTTR True NCI_RA007_Epitope_Rep4 1030.55195574338 1030.55084993586 76.133 2 -0.9335688006745029 0.28112333924130634 1.0 ['ENST00000216068.8_1_22:39175605-39178756:-|nuORF', 'ENST00000406199.3_1_22:39176875-39178747:-|nuORF'] 45301 13020 ISAPDQLMPY True H1975_Epitope_Rep1 1133.54269649929 1133.5415899358602 55.164 2 -0.9335969531132311 0.28113321609144865 1.0 ['ENSG00000148942|ENST00000396005|SLC5A12', 'nc|ENSG00000148942|Q1EHB4-2|SLC5A12'] 46155 16021 ITCRASQSI True PC9_epitope_Rep1 977.49641501321 977.49530993586 66.438 2 -0.93365965132322 0.2811568317647867 1.0 ['nc|ENSG00000225523|A0A0A0MT36|IGKV6D-21', 'nc|ENSG00000211611|A0A0C4DH24|IGKV6-21', 'nc|ENSG00000251546|P04432|IGKV1D-39', 'nc|ENSG00000243466|P01602|IGKV1-5'] 122027 4224 VGQLTEQRKD True PC9_epitope_Rep4 1172.6149499227597 1172.61331490379 22.622 3 -0.9339330171698798 0.28130023218431865 1.0 ['nc|ENSG00000137261|Q5VV43-3|KIAA0319', 'nc|ENSG00000137261|Q5VV43-2|KIAA0319', 'ENSG00000137261|ENST00000378214|KIAA0319', 'nc|ENSG00000137261|Q5VV43-4|KIAA0319'] 108280 6958 TEASSSAFR True H1975_Epitope_Rep3 954.4406739588999 954.43956993586 31.725 2 -0.9339581197064327 0.28130023218431865 1.0 ['nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 77851 19601 PAGGRCVR True PC9_epitope_Rep3 814.4231905032999 814.4226449679301 80.632 1 -0.933972122523933 0.2813083855368722 1.0 ['ENSG00000103260|ENST00000568223|METRN'] 130163 14052 VTRRRMQL True PC9_epitope_Rep6 1058.6131165313 1058.6120099358602 65.921 2 -0.9340142857327683 0.2813083855368722 1.0 ['ENSG00000122912|ENST00000609923|SLC25A16', 'SLC25A16|p.D262V|1|0.47|ENSG00000122912|chr10:68487201-68487201|T/A|missense_variant'] 135986 7197 YFFHKRDWKTQ True H1975_Epitope_Rep1 1554.7731818996594 1554.7715249037901 32.698 3 -0.9340414382209749 0.2813083855368722 1.0 ['nc|ENSG00000172421|Q8N7B9-2|EFCAB3', 'ENSG00000172421|ENST00000305286|EFCAB3'] 78546 3354 PDMKIEEVPE True H1975_Epitope_Rep3 1185.5587404862497 1185.55708490379 17.702 3 -0.9340842764689165 0.2813083855368722 1.0 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10', 'nc|ENSG00000170325|Q9NQV6-2|PRDM10', 'nc|ENSG00000170325|Q9NQV6-1|PRDM10', 'nc|ENSG00000170325|Q9NQV6-5|PRDM10'] 140046 4016 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 20.273 3 -0.9340885818720122 0.2813083855368722 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 43440 12250 IHSQQHVL True NCI_RA007_Epitope_Rep5 960.51411368268 960.5130099358599 53.769 2 -0.9341324016611016 0.28131439404346514 1.0 ['ENSG00000197386|ENST00000355072|HTT'] 67774 7814 LTHDTSISF True H1975_Epitope_Rep3 1019.49237517859 1019.49126993586 35.04 2 -0.9341909474820811 0.28131439404346514 1.0 ['ENST00000419087.1_1_1:247782982-247783861:+|nuORF', 'ENSG00000198452|ENST00000641545|OR14L1P'] 6255 13224 APRLRPLQRH True NCI_RA007_Epitope_Rep4 1242.7421565549 1242.74050490379 57.992 3 -0.9342658404805543 0.2813242667765643 1.0 ['ENST00000447648.6_1_7:97846532-97846739:-|nuORF'] 19430 9787 ELPLQDEP True H1975_Epitope_Rep3 939.45492704071 939.45382993586 42.669 2 -0.9342991092920244 0.28135774825885684 1.0 ['ARHGEF15|p.G650Afs*145|1|0.15|ENSG00000198844|chr17:8318820-8318820|G/-|frameshift_variant', 'ENSG00000198844|ENST00000361926|ARHGEF15'] 140437 14144 YYFILNSCWF True H1975_Epitope_Rep1 1354.60563110902 1354.60452993586 59.577 2 -0.9343053882094784 0.28135774825885684 1.0 ['ENSG00000163793|ENST00000296097|DNAJC5G'] 24921 23427 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 96.488 2 -0.9344186009175757 0.28138135663067665 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 53147 3988 KSPHSVSAWLP True NCI_RA007_Epitope_Rep2 1207.6349570913499 1207.63330490379 20.149 3 -0.9344421415865958 0.2813912279014822 1.0 ['ENST00000398125.5_1_4:2930542-2930704:+|nuORF'] 111867 17755 TLRLQEEF True PC9_epitope_Rep5 1034.5396597241797 1034.53856993586 73.314 2 -0.9344796258928496 0.2814423076923077 1.0 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2'] 61075 6478 LLAVSHVG True PC9_epitope_Rep3 794.46503823194 794.46394993586 29.943 2 -0.934530633474972 0.28146591392975373 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'nc|ENSG00000091536|Q9UKN7-2|MYO15A', 'ENST00000536811.5_1_17:18058633-18060585:+|nuORF'] 122103 24362 VGRFKNRKDR True PC9_epitope_Rep3 1274.73198579402 1274.7308899358602 99.024 2 -0.9345500591123624 0.2814719173660426 1.0 ['ENSG00000254535|ENST00000421491|PABPC4L'] 1493 4859 AEENEQITIA True PC9_epitope_Rep4 1116.52988288612 1116.52878993586 25.28 2 -0.9345517441325598 0.2814719173660426 1.0 ['nc|ENSG00000131374|Q92609|TBC1D5', 'ENSG00000131374|ENST00000696125|TBC1D5'] 41280 9225 IAGMIYKYIE True NCI_RA007_Epitope_Rep2 1199.6260322004298 1199.62492993586 40.492 2 -0.9346747797650432 0.281493791891001 1.0 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4', 'nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6', 'ENST00000560023.1_1_15:34533432-34537514:-|nuORF'] 126171 19993 VPFTKETAGYL True PC9_epitope_Rep2 1224.6390394122798 1224.6379499358602 82.305 2 -0.9347062022045943 0.281493791891001 1.0 ['SPIDR|p.L343P|1|0.1|ENSG00000164808|chr8:47440473-47440473|T/C|missense_variant'] 83236 13110 QACRLRKCYE True PC9_epitope_Rep4 1268.61179620196 1268.61016490379 58.321 3 -0.934710072614373 0.281493791891001 1.0 ['nc|ENSG00000091831|P03372-3|ESR1', 'nc|ENSG00000091831|P03372-2|ESR1', 'ENSG00000091831|ENST00000206249|ESR1', 'nc|ENSG00000091831|P03372-4|ESR1', 'nc|ENSG00000140009|Q92731-3|ESR2', 'ESR1|p.I326Yfs*17|1|0.35|ENSG00000091831|chr6:151944387-151944387|G/-|frameshift_variant', 'nc|ENSG00000140009|Q92731-8|ESR2', 'nc|ENSG00000140009|Q92731-7|ESR2', 'nc|ENSG00000140009|Q92731-6|ESR2', 'nc|ENSG00000140009|Q92731-9|ESR2', 'nc|ENSG00000140009|Q92731-5|ESR2', 'nc|ENSG00000140009|Q92731-2|ESR2', 'ENSG00000140009|ENST00000341099|ESR2', 'nc|ENSG00000140009|Q92731-4|ESR2'] 54654 8455 LADSSPRWLW True H1975_Epitope_Rep1 1229.61930702721 1229.61820993586 37.451 2 -0.9347266786606108 0.281493791891001 1.0 ['JCAD|p.A1030Qfs*35|1|0.16|ENSG00000165757|chr10:30027060-30027060|C/-|frameshift_variant', 'ENSG00000165757|ENST00000375377|JCAD'] 71399 20480 MIGFSCGHFV True PC9_epitope_Rep5 1096.4834078013598 1096.48230993586 83.815 2 -0.9347361107051483 0.281493791891001 1.0 ['ENSG00000157796|ENST00000399820|WDR19', 'WDR19|p.K475*|1|0.42|ENSG00000157796|chr4:39218047-39218048|-/T|frameshift_variant', 'nc|ENSG00000157796|Q8NEZ3-2|WDR19', 'ENST00000512448.1_1_4:39201144-39207357:+|nuORF'] 103149 9109 SQMTKEKKITG True NCI_RA007_Epitope_Rep1 1249.6700222707298 1249.6689299358602 39.434 2 -0.9348072021964307 0.2815448639591259 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB'] 101283 9421 SLWTELC[Carbamidomethyl]DWLR True H1975_Epitope_Rep1 1477.7023853076 1477.7012899358601 41.15 2 -0.9348737362393581 0.2815547314929268 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 82637 23173 PVLLHLPRM True PC9_epitope_Rep2 1074.63720602082 1074.63610993586 94.62 2 -0.9348983009553737 0.2815645987556825 1.0 ['ENST00000489097.5_1_1:6526697-6527309:-|nuORF'] 10592 17740 CRRRRRRRRLF True H1975_Epitope_Rep1 1629.9811155473296 1629.9800099358602 73.834 2 -0.9349240054371332 0.281576598228387 1.0 ['ENST00000550735.6_1_12:112280040-112280175:+|nuORF'] 83494 10366 QDGWLYKYHWK True NCI_RA007_Epitope_Rep1 1522.7357337617798 1522.73462993586 44.306 2 -0.9349318289819389 0.281576598228387 1.0 ['nc|ENSG00000156103|P51512-2|MMP16'] 71499 25335 MKMKILKSRL True PC9_epitope_Rep2 1246.7617549109398 1246.76064993586 103.13 2 -0.9349434168761044 0.281576598228387 1.0 ['ENST00000484167.5_1_2:242282419-242283206:+|nuORF'] 118319 8843 VDEGFARL True NCI_RA007_Epitope_Rep1 905.4606811274899 905.45958993586 38.396 2 -0.9349491784822627 0.281576598228387 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40', 'ENST00000554514.1_1_14:21549058-21555515:+|nuORF', 'ENST00000555232.5_1_14:21549679-21554039:+|nuORF'] 43791 21035 IKEQRERERQR True PC9_epitope_Rep1 1526.8389700436999 1526.83786993586 85.741 2 -0.9349576459436205 0.28158259747037095 1.0 ['ENSG00000130254|ENST00000252542|SAFB2'] 57438 8528 LEINGVVYTG True PC9_epitope_Rep4 1063.55497543515 1063.5538699358601 40.281 2 -0.9349577603263788 0.28158259747037095 1.0 ['ENSG00000205143|ENST00000378909|ARID3C'] 131447 23619 VVTSVKTRVS True PC9_epitope_Rep5 1074.6397081186199 1074.6386099358601 95.829 2 -0.9350213328938558 0.28160232906246996 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 27095 19878 FLQARTPTL True PC9_epitope_Rep1 1045.59202965021 1045.59092993586 81.28 2 -0.935065060169394 0.28160232906246996 1.0 ['ENSG00000132688|ENST00000368223|NES'] 57260 3735 LEFWRLDYWED True NCI_RA007_Epitope_Rep2 1570.70924423042 1570.70758490379 19.17 3 -0.9351177688047673 0.2816259269431475 1.0 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant'] 37353 7704 GVWPRTWPH True NCI_RA007_Epitope_Rep4 1134.57229726514 1134.57064490379 36.302 3 -0.9352421749382341 0.28167698878070885 1.0 ['ENSG00000006282|ENST00000006658|SPATA20'] 10159 26638 CCCCCGGG True H1975_Epitope_Rep2 704.1208797689599 704.1203249679301 109.74 1 -0.9352586745286646 0.28169671669664803 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 80413 24654 PLIYILQN True NCI_RA007_Epitope_Rep5 972.56441792004 972.56332993586 102.32 2 -0.9352590486635591 0.28169671669664803 1.0 ['OR11H1|p.S295I|1|0.2|ENSG00000130538|chr22:15529075-15529075|G/T|missense_variant'] 24922 23563 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 97.16 2 -0.9352754016416137 0.28170271198077584 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 98361 5864 SIHHHAWMAW True NCI_RA007_Epitope_Rep4 1274.57673102258 1274.5756299358602 29.177 2 -0.9352886611971599 0.28170271198077584 1.0 ['ENST00000576570.5_1_17:5389818-5391587:+|nuORF'] 7243 24204 ARHRPFNIRL True PC9_epitope_Rep1 1278.7421565548998 1278.74104993586 97.916 2 -0.9353649734757594 0.2817361692778777 1.0 ['ENST00000446158.5_1_X:48380534-48380582:+|nuORF'] 61004 6403 LLALHSAA True PC9_epitope_Rep5 794.4650382319401 794.46394993586 29.605 2 -0.9353831619785872 0.2817361692778777 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 35333 8366 GSVRLLAEYE True PC9_epitope_Rep6 1135.5873381925896 1135.58569490379 41.836 3 -0.9354172151487988 0.28174603174603174 1.0 ['ENSG00000183186|ENST00000332235|C2CD4C'] 20225 8935 ENTYFLFPPLP True H1975_Epitope_Rep3 1336.6703395405598 1336.66924993586 39.367 2 -0.9354953941345294 0.2817833555314504 1.0 ['ENST00000367279.8_1_1:202128675-202129107:-|nuORF'] 122509 14670 VGSSCTSC True NCI_RA007_Epitope_Rep5 742.2625755679001 742.2620249679301 63.096 1 -0.9355762163167802 0.2818034542409182 1.0 ['ENST00000369936.2_1_1:109730792-109745631:+|nuORF', 'ENST00000369938.5_1_1:109730226-109745631:+|nuORF', 'nc|ENSG00000116299|Q6UXG2-3|ELAPOR1', 'ENST00000527996.5_1_1:109656894-109745573:+|nuORF', 'nc|ENSG00000116299|Q6UXG2-2|ELAPOR1', 'nc|ENSG00000116299|Q6UXG2-4|ELAPOR1', 'ENSG00000116299|ENST00000369939|ELAPOR1'] 59756 12465 LGWPGWGP True PC9_epitope_Rep1 868.4231734199599 868.42206993586 52.812 2 -0.9356028963785118 0.2818034542409182 1.0 ['ENST00000415992.5_1_9:139693810-139699267:+|nuORF'] 104690 5031 STAPEIKAP True PC9_epitope_Rep1 912.4916469025999 912.49054993586 24.211 2 -0.9356155923238352 0.2818034542409182 1.0 ['ENSG00000088038|ENST00000221232|CNOT3'] 10797 9902 DAEAPWLSK True H1975_Epitope_Rep3 1015.49746055903 1015.49636993586 43.119 2 -0.9356185229639529 0.2818034542409182 1.0 ['ENSG00000104529|ENST00000618139|EEF1D', 'ENST00000525223.1_1_8:144671159-144671477:-|nuORF'] 21938 10219 ESIQCFQN True H1975_Epitope_Rep1 967.4069313024701 967.40582993586 44.25 2 -0.9356221282160678 0.2818034542409182 1.0 ['ENSG00000071794|ENST00000310053|HLTF', 'nc|ENSG00000071794|Q14527-2|HLTF'] 116385 9559 TVYWYKDGK True H1975_Epitope_Rep1 1158.5709598524597 1158.5698699358602 41.695 2 -0.9356226099890986 0.2818034542409182 1.0 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 17938 15362 EIENSFITKWK True H1975_Epitope_Rep1 1393.7241660185698 1393.7230699358602 64.359 2 -0.9356451472910786 0.2818034542409182 1.0 ['ARAP2|p.D1308E|1|0.36|ENSG00000047365|chr4:36119689-36119689|G/C|missense_variant'] 24975 2776 FDDGDCCD True NCI_RA007_Epitope_Rep4 888.226583982 888.22548993586 15.542 2 -0.9356614154004558 0.2818034542409182 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 25048 2582 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 14.896 2 -0.9356644712994567 0.2818034542409182 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 119066 8590 VEHFTYWRTVR True PC9_epitope_Rep3 1492.7575318355198 1492.75588490379 37.993 3 -0.9357429273549562 0.28184289283655034 1.0 ['ENST00000370803.7_1_X:133560483-133560717:+|nuORF'] 139110 19059 YSPIRKRR True NCI_RA007_Epitope_Rep1 1074.6410455313 1074.6399499358602 78.276 2 -0.9357483610553848 0.28184289283655034 1.0 ['ENSG00000177679|ENST00000611745|SRRM3', 'nc|ENSG00000177679|A6NNA2|SRRM3'] 127694 22502 VRGRARAA True PC9_epitope_Rep1 855.5151167421899 855.51400993586 91.355 2 -0.9357491664120909 0.28184289283655034 1.0 ['ENST00000591735.2_1_19:1491211-1495711:+|nuORF'] 66034 11779 LSMVMHNY True H1975_Epitope_Rep2 993.4412086362099 993.44010993586 50.382 2 -0.935766313516374 0.28184289283655034 1.0 ['RESF1|p.E1724Kfs*23|1|0.2|ENSG00000174718|chr12:31992457-31992457|A/-|frameshift_variant', 'ENSG00000174718|ENST00000312561|RESF1'] 32268 19725 GFQLRRRV True NCI_RA007_Epitope_Rep4 1030.6148307834599 1030.6137299358602 85.244 2 -0.9358349923205386 0.28189393627390413 1.0 ['ENST00000475028.2_1_6:679447-689206:-|nuORF'] 135535 4660 YEEEQVER True NCI_RA007_Epitope_Rep3 1080.4723680099999 1080.4712699358602 25.256 2 -0.9359355018098011 0.28194110783169746 1.0 ['ENST00000546687.1_1_12:113321187-113328809:+|nuORF', 'ENST00000549913.6_1_12:113307544-113334582:+|nuORF', 'nc|ENSG00000089169|Q9Y2J0-2|RPH3A', 'ENSG00000089169|ENST00000389385|RPH3A'] 137485 16283 YLPLSDVNF True PC9_epitope_Rep3 1066.5335117145798 1066.5324099358602 67.769 2 -0.9359376275533537 0.28194110783169746 1.0 ['DPH5|p.N275Ifs*53|1|0.23|ENSG00000117543|chr1:100990442-100990442|T/-|frameshift_variant'] 46635 10952 ITTRPNRIYMT True NCI_RA007_Epitope_Rep1 1364.7234548259198 1364.7223499358602 46.595 2 -0.9360198334908876 0.2819784202289762 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 39402 8082 HLVSYIKMHPR True NCI_RA007_Epitope_Rep2 1379.7496100041099 1379.74850993586 36.07 2 -0.9360465490424917 0.2820020042005848 1.0 ['ENST00000397381.4_1_19:15946156-15946336:+|nuORF'] 38592 3140 HHHHRWWRHCH True NCI_RA007_Epitope_Rep1 1627.7340685660301 1627.73242490379 16.104 3 -0.9361013004418168 0.2820217161525896 1.0 ['ENST00000373316.4_1_X:77380531-77380872:+|nuORF'] 74641 5496 NLENLYLQG True PC9_epitope_Rep4 1062.53457434374 1062.53346993586 27.899 2 -0.9361289028576047 0.2820217161525896 1.0 ['ENSG00000122176|ENST00000354955|FMOD'] 24923 23696 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 97.835 2 -0.9361360273688842 0.28202770037473746 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 17101 8624 EGRRWRVQRRP True NCI_RA007_Epitope_Rep2 1494.8392448272198 1494.83758490379 38.19 3 -0.9361885426540564 0.28202770037473746 1.0 ['ENST00000474959.5_1_1:153631432-153631540:+|nuORF'] 127753 25719 VRKERKRHKT True PC9_epitope_Rep4 1336.81638412432 1336.8152899358602 108.32 2 -0.9362559683909889 0.28205128205128205 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 120574 14151 VGAESGRYYCL True PC9_epitope_Rep1 1216.55465816532 1216.5535699358602 59.254 2 -0.9363341840636126 0.28208858935115916 1.0 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3', 'ENST00000492407.1_1_5:141008096-141008788:-|nuORF', 'ENST00000476739.5_1_5:141007605-141008788:-|nuORF', 'ENST00000467533.5_1_5:141005762-141009272:-|nuORF'] 32361 2148 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 11.279 2 -0.9364067268198414 0.282098443462267 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 120062 23272 VFFLIVVICK True NCI_RA007_Epitope_Rep3 1179.70897397875 1179.70732490379 101.09 3 -0.9365114258548146 0.2821163875926434 1.0 ['ENSG00000134294|ENST00000256689|SLC38A2', 'nc|ENSG00000134294|Q96QD8-2|SLC38A2'] 130225 24717 VTSKQTLLTNA True PC9_epitope_Rep5 1174.65575210558 1174.65464993586 100.21 2 -0.9365128660735097 0.2821163875926434 1.0 ['ENSG00000184445|ENST00000333479|KNTC1'] 63407 11260 LPGIHVSA True PC9_epitope_Rep3 792.4493881678 792.44828993586 48.319 2 -0.9365728477232688 0.2821163875926434 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 65634 11754 LSGQKKPLAA True PC9_epitope_Rep1 1011.6076797143497 1011.60658993586 50.085 2 -0.9366006469424976 0.2821163875926434 1.0 ['ENST00000311852.10_1_14:23315916-23316006:+|nuORF'] 87145 24872 QSIIHKFLTA True PC9_epitope_Rep2 1156.6604435632 1156.65934993586 101.35 2 -0.9366015640583489 0.2821163875926434 1.0 ['nc|ENSG00000095787|Q9BTA9-5|WAC', 'nc|ENSG00000095787|Q9BTA9-2|WAC', 'ENSG00000095787|ENST00000354911|WAC', 'nc|ENSG00000095787|Q9BTA9-3|WAC'] 59765 6002 LGYLKLCS True PC9_epitope_Rep5 895.4837250711901 895.48262993586 28.082 2 -0.9366509490715829 0.2821163875926434 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 82657 13707 PVLQTRPL True PC9_epitope_Rep3 922.5600012459399 922.55890993586 57.805 2 -0.9366879613204853 0.2821536899026914 1.0 ['EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion'] 20247 5158 ENWYKKYQKP True NCI_RA007_Epitope_Rep1 1382.6982856238997 1382.69665490379 24.146 3 -0.9367305782578547 0.2821557971014493 1.0 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 67797 13563 LTHRSFVSEF True PC9_epitope_Rep1 1221.61422164677 1221.61258490379 57.026 3 -0.9367394908282461 0.2821557971014493 1.0 ['nc|ENSG00000188089|Q3MJ16-2|PLA2G4E', 'ENSG00000188089|ENST00000696112|PLA2G4E', 'nc|ENSG00000188089|Q3MJ16|PLA2G4E'] 109153 11096 TFNLIRHLLL True NCI_RA007_Epitope_Rep4 1238.7499272739399 1238.7482849037901 49.556 3 -0.9368131577510233 0.2821557971014493 1.0 ['nc|ENSG00000163354|Q5T1A1-2|DCST2', 'ENSG00000163354|ENST00000368424|DCST2'] 124458 10979 VLETRYTL True PC9_epitope_Rep3 993.5494961318899 993.54838993586 47.217 2 -0.9368221854867839 0.28215790412669656 1.0 ['ENSG00000257743|ENST00000477922|MGAM2', 'ENST00000496337.1_1_7:141870985-141908039:+|nuORF'] 81636 23726 PRRRRTRRTLT True NCI_RA007_Epitope_Rep4 1467.8970940565098 1467.89545490379 102.88 3 -0.9368475806384239 0.28215790412669656 1.0 ['ENST00000259818.7_1_6:3227772-3227856:-|nuORF'] 118574 5795 VEAARRYVQFM True NCI_RA007_Epitope_Rep1 1368.6972400780799 1368.6961499358601 26.595 2 -0.9369091065315922 0.28215790412669656 1.0 ['ENSG00000115850|ENST00000264162|LCT'] 30957 11854 GASRNPERPLR True H1975_Epitope_Rep3 1251.67961586799 1251.6785099358601 50.744 2 -0.9369198179628981 0.28216775539331396 1.0 ['ENST00000463441.5_1_7:150020319-150023055:+|nuORF'] 23293 12138 EVSCWPTL True PC9_epitope_Rep1 933.42660411789 933.42550993586 51.55 2 -0.9370344194462087 0.2822011801838891 1.0 ['ENSG00000196865|ENST00000369301|NHLRC2'] 127601 26177 VRAAHLRL True PC9_epitope_Rep5 934.58246802602 934.58136993586 106.41 2 -0.9370456857867777 0.2822011801838891 1.0 ['ENST00000340634.4_1_3:142681054-142682041:-|nuORF'] 55885 8764 LDGAQTVVVI True H1975_Epitope_Rep3 1013.5757108797299 1013.5746099358599 38.717 2 -0.9370973621333162 0.28221103045107104 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 134395 25037 WSWGCAGF True PC9_epitope_Rep6 912.3588589112398 912.35776993586 111.31 2 -0.9371917647758777 0.28227610148328053 1.0 ['ENST00000390624.3_1_14:106994224-106994287:-|nuORF'] 8361 13126 ATMEQDLYQLS True H1975_Epitope_Rep3 1297.58601786325 1297.5849299358601 55.736 2 -0.9372043236839822 0.28227610148328053 1.0 ['EPS8|p.A457S|1|0.25|ENSG00000151491|chr12:15650888-15650888|C/A|missense_variant'] 80813 18221 PLTGVKEA True PC9_epitope_Rep4 813.45961849833 813.4590749679301 78.156 1 -0.9372069604924839 0.28227610148328053 1.0 ['ENSG00000162337|ENST00000294304|LRP5', 'PPP6R3-LRP5|6|fusion', 'PPP6R3-LRP5|5|fusion', 'ENST00000529993.5_1_11:68171724-68216535:+|nuORF', 'ENSG00000070018|ENST00000261349|LRP6', 'LRP6|p.L805Ffs*10|2|0.2|ENSG00000070018|chr12:12159831-12159831|G/-|frameshift_variant', 'PPP6R3-LRP5|3|fusion', 'PPP6R3-LRP5|1|fusion', 'PPP6R3-LRP5|4|fusion', 'PPP6R3-LRP5|2|fusion'] 101341 14296 SLYSVTIPDHL True H1975_Epitope_Rep1 1243.6448530687098 1243.6437499358601 60.176 2 -0.9372620058884957 0.28227610148328053 1.0 ['ENST00000393196.7_1_17:49239254-49239476:+|nuORF'] 93775 23594 RTSVTRRRSRS True PC9_epitope_Rep2 1360.77597586432 1360.77433490379 96.224 3 -0.9372699577103099 0.28227610148328053 1.0 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant', 'SRRM2|p.D2086*|1|0.13|ENSG00000167978|chr16:2766782-2766783|-/G|frameshift_variant'] 60019 17572 LHRGRRLLGP True PC9_epitope_Rep5 1173.7206928343298 1173.71958993586 72.599 2 -0.937275895548772 0.28227610148328053 1.0 ['ENST00000424383.4_1_7:1784183-1785002:+|nuORF'] 90553 25109 RKFVGGPG True NCI_RA007_Epitope_Rep5 816.4606215578398 816.46007496793 104.08 1 -0.9372790563792212 0.28227610148328053 1.0 ['ENSG00000203740|ENST00000439373|NTMT2'] 25053 25137 FDDGDCCD True PC9_epitope_Rep6 888.226583982 888.22548993586 111.8 2 -0.9373353148822263 0.28227610148328053 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 128553 16126 VSHRGKTL True NCI_RA007_Epitope_Rep4 896.5191990631199 896.51810993586 69.93 2 -0.9373922648364769 0.2822820762613027 1.0 ['ENSG00000108932|ENST00000580666|SLC16A6'] 83574 15914 QDSKMDYKRRF True NCI_RA007_Epitope_Rep1 1472.7194320746396 1472.71832993586 66.003 2 -0.9374412350645631 0.2822820762613027 1.0 ['ENSG00000166398|ENST00000299505|GARRE1'] 58631 6213 LFFYRKFRFWN True H1975_Epitope_Rep1 1622.8510382975396 1622.84938490379 28.967 3 -0.9374789397968744 0.2822978980297459 1.0 ['ENST00000327827.11_1_16:9212523-9212682:+|nuORF'] 105120 10545 STLPKSLSL True PC9_epitope_Rep2 944.55424715916 944.55314993586 45.881 2 -0.9375047264043624 0.2822978980297459 1.0 ['chr20:43713106-43715163|405|27.86|0.37|6.23|+|0|MYBL2,None|1', 'nc|ENSG00000101057|P10244-2|MYBL2', 'ENSG00000101057|ENST00000217026|MYBL2'] 69794 9417 LWRRRELWFWW True H1975_Epitope_Rep3 1732.9102845091595 1732.90864490379 41.225 3 -0.9375164629234075 0.2822978980297459 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 120983 4819 VGESNHQAF True PC9_epitope_Rep1 987.4410083120699 987.43990993586 23.406 2 -0.9375502364659032 0.28232146532208274 1.0 ['nc|ENSG00000184307|Q8IYP9|ZDHHC23', 'ENSG00000184307|ENST00000638807|ZDHHC23'] 134335 8283 WRWTWRPGSRM True NCI_RA007_Epitope_Rep1 1517.74625595917 1517.74462490379 36.218 3 -0.9375957653782105 0.28233728460103175 1.0 ['MAP2K7|p.Y322Rfs*88|1|0.33|ENSG00000076984|chr19:7911461-7911464|CCTA/-|frameshift_variant'] 60412 12084 LIKEVNGVP True PC9_epitope_Rep1 967.5702315764698 967.56912993586 51.341 2 -0.9376275760441398 0.28233728460103175 1.0 ['ENST00000357628.7_1_7:124538411-124568991:-|nuORF'] 15753 5355 EDEEEMEHQE True PC9_epitope_Rep3 1303.4510405120698 1303.44994993586 25.673 2 -0.9376495018113064 0.28233728460103175 1.0 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF'] 48672 18825 KELEPQLTILY True H1975_Epitope_Rep3 1345.74931813725 1345.74822993586 78.956 2 -0.9376712170604035 0.282339383462979 1.0 ['ENST00000434942.1_1_22:32664397-32665363:+|nuORF'] 138519 4371 YRKQEMERNEI True PC9_epitope_Rep6 1494.7249113778996 1494.7232549037901 23.907 3 -0.9376769156081773 0.282339383462979 1.0 ['ENSG00000198780|ENST00000687041|FAM169A'] 4600 20202 ALAEEKHKAL True PC9_epitope_Rep4 1108.6240580544797 1108.62296993586 85.844 2 -0.9377588637157142 0.282339383462979 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 58794 22631 LFPRRRRRRRR True PC9_epitope_Rep5 1624.0246946114698 1624.0235899358602 92.049 2 -0.9378029615349891 0.2823492289963233 1.0 ['ENST00000222747.7_1_7:120497939-120498116:-|nuORF'] 69887 5468 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True H1975_Epitope_Rep3 1442.6356288295895 1442.6345299358602 26.086 2 -0.9378216370301039 0.2823590742595311 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 90674 10259 RKLHYQTYREM True H1975_Epitope_Rep1 1523.7667166202298 1523.76560993586 44.403 2 -0.9379187008017525 0.282388608428446 1.0 ['ENSG00000085840|ENST00000371568|ORC1'] 19066 22309 ELGYLCLKWLP True PC9_epitope_Rep5 1333.7104305307298 1333.70932993586 90.818 2 -0.9379277469146033 0.282388608428446 1.0 ['ENST00000297578.8_1_8:104412404-104412587:-|nuORF'] 126469 16816 VPLTTLKNI True PC9_epitope_Rep3 997.61718176889 997.61608993586 69.835 2 -0.9379278767553217 0.282388608428446 1.0 ['ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A', 'ENSG00000176809|ENST00000584306|LRRC37A3'] 83622 12205 QDVLYLRFWK True NCI_RA007_Epitope_Rep1 1366.7397565130598 1366.7386499358602 51.442 2 -0.9380086218944845 0.28242023538448874 1.0 ['ENST00000359933.5_1_14:96749930-96750203:-|nuORF'] 81688 3054 PRSSSLWIELC True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 16.664 3 -0.9380114554774568 0.28242023538448874 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 16996 13994 EGILDAIMVWF True H1975_Epitope_Rep3 1292.6474959209997 1292.64638993586 59.147 2 -0.9380425015116307 0.28242023538448874 1.0 ['EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion', 'nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 131490 18570 VVVARALRGRG True NCI_RA007_Epitope_Rep4 1152.7203584811598 1152.7187249037902 80.338 3 -0.9380755181535276 0.28242023538448874 1.0 ['ENSG00000243477|ENST00000443094|NAA80', 'nc|ENSG00000243477|Q93015-2|NAA80'] 72586 15951 MVQDDQYLCLP True PC9_epitope_Rep1 1323.5839096882698 1323.58225490379 66.165 3 -0.9380790515771987 0.28242023538448874 1.0 ['Tigger3b_dup1661|chr4:76922990-76924128:+|1.148447326952616|0.3752794373866462|1.61|502.0|70|2|anti-sense'] 67905 7450 LTLASLPR True NCI_RA007_Epitope_Rep5 869.53345214493 869.53234993586 35.336 2 -0.9381009037505439 0.28242023538448874 1.0 ['nc|ENSG00000285292|Q9UG63-2|ABCF2'] 58667 16484 LFHSSSDVLP True PC9_epitope_Rep3 1100.55022440788 1100.54912993586 68.542 2 -0.9381137405863351 0.2824262043234939 1.0 ['ENST00000517565.1_1_7:143510556-143510709:-|nuORF'] 130090 18129 VTQRGHRR True NCI_RA007_Epitope_Rep1 1008.5689432201998 1008.56837496793 74.66 1 -0.9381528051072894 0.2824262043234939 1.0 ['ENSG00000033100|ENST00000035307|CHPF2', 'nc|ENSG00000033100|Q9P2E5-2|CHPF2'] 83932 23080 QEKRKLSV True PC9_epitope_Rep1 986.5872786229398 986.58618993586 93.58 2 -0.9381993179868068 0.28246347987106507 1.0 ['ENSG00000197798|ENST00000533050|FAM118B'] 26888 4546 FLFPSLLQVF True NCI_RA007_Epitope_Rep2 1209.6797820254499 1209.6781349037901 22.311 3 -0.9383038164234999 0.28247332181164786 1.0 ['ENST00000538029.1_1_12:9102760-9162130:+|nuORF'] 68015 7067 LTMGSGKG True PC9_epitope_Rep3 749.3741746222099 749.37306993586 32.192 2 -0.9383960119179581 0.2825243117944779 1.0 ['ENST00000531068.5_1_11:64949924-64950017:+|nuORF'] 41898 4729 IDYFFFFKQQK True H1975_Epitope_Rep3 1509.7656369077297 1509.76399490379 23.315 3 -0.9384204771747049 0.2825341526307127 1.0 ['ENST00000246949.9_1_16:3704910-3705863:+|nuORF', 'ENST00000571460.5_1_16:3704910-3712757:+|nuORF'] 66951 6372 LSYRGVHEL True NCI_RA007_Epitope_Rep3 1072.56654317836 1072.5654499358602 32.067 2 -0.9384665976288977 0.2825714246526492 1.0 ['nc|ENSG00000182185|O15315-4|RAD51B', 'nc|ENSG00000182185|O15315|RAD51B', 'nc|ENSG00000182185|O15315-1|RAD51B', 'ENSG00000182185|ENST00000471583|RAD51B', 'RAD51B-GPHN|1|fusion', 'RAD51B-MARK3|2|fusion', 'RAD51B-MARK3|4|fusion', 'RAD51B-MARK3|1|fusion', 'RAD51B-MARK3|3|fusion'] 83935 15678 QEKRRMRP True PC9_epitope_Rep6 1099.60328012359 1099.60218993586 72.515 2 -0.9385003793097331 0.28258126457276095 1.0 ['ENSG00000174502|ENST00000367135|SLC26A9', 'nc|ENSG00000174502|Q7LBE3-2|SLC26A9'] 129085 24975 VTARVIGG True PC9_epitope_Rep3 771.4602872046698 771.4597349679301 101.41 1 -0.938525471277183 0.2826009436032478 1.0 ['ENSG00000148843|ENST00000369797|PDCD11'] 60292 8994 LIEQYELREEH True NCI_RA007_Epitope_Rep2 1457.71505788685 1457.7134249037902 39.589 3 -0.9385311653415377 0.2826009436032478 1.0 ['ENSG00000084652|ENST00000373610|TXLNA'] 77720 8628 PAAIPTSA True PC9_epitope_Rep1 726.39120458534 726.39065496793 38.025 1 -0.9385368728430963 0.28262449768902664 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 76930 12513 NVNLTIFTARL True H1975_Epitope_Rep3 1260.71902106848 1260.7179299358602 53.327 2 -0.9385595836051653 0.2826346319990126 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D', 'ENSG00000244509|ENST00000361441|APOBEC3C'] 62703 14221 LLWWGWVL True PC9_epitope_Rep4 1071.59057309823 1071.58946993586 62.609 2 -0.9385725713442996 0.2826346319990126 1.0 ['nc|ENSG00000146276|P24046-2|GABRR1', 'ENSG00000146276|ENST00000454853|GABRR1'] 102781 12446 SQEPKYQL True NCI_RA007_Epitope_Rep5 991.4974605590301 991.49691496793 54.531 1 -0.9385968385461749 0.2826346319990126 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 88757 11603 RDGDRLWYENP True PC9_epitope_Rep1 1419.6531263366296 1419.6520299358601 49.51 2 -0.9386099660470041 0.2826346319990126 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 129216 7026 VTDKTKVP True H1975_Epitope_Rep2 886.5123823471799 886.51128993586 31.95 2 -0.9386334919009838 0.2826346319990126 1.0 ['ENSG00000164530|ENST00000373674|PI16'] 35101 23481 GRRGKCLK True PC9_epitope_Rep6 916.5388889618799 916.53834496793 103.43 1 -0.9386555655588114 0.2826346319990126 1.0 ['ENST00000409088.3_1_2:77745377-77745434:-|nuORF'] 114384 13739 TSDLHRNRSR True H1975_Epitope_Rep1 1240.6384793319999 1240.63738993586 57.987 2 -0.9386889340974298 0.2826346319990126 1.0 ['ENSG00000188869|ENST00000359440|TMC3'] 122220 10708 VGRPDKEEL True PC9_epitope_Rep1 1041.54547338061 1041.54436993586 46.077 2 -0.9387114217516294 0.2826346319990126 1.0 ['nc|ENSG00000135931|Q7Z3E5-2|ARMC9', 'ENSG00000135931|ENST00000611582|ARMC9'] 107986 20741 TCRKELHLQST True NCI_RA007_Epitope_Rep5 1314.6714192530599 1314.66976490379 86.753 3 -0.9387622347349591 0.2826444694330929 1.0 ['nc|ENSG00000185053|Q96LD1|SGCZ', 'ENSG00000185053|ENST00000382080|SGCZ'] 85108 19860 QISDGLVEITW True PC9_epitope_Rep2 1259.63976768827 1259.6386699358602 81.783 2 -0.9388434171572897 0.28268173278663794 1.0 ['ENSG00000132357|ENST00000254691|CARD6'] 84469 8344 QGLRSLHVL True PC9_epitope_Rep2 1021.60326304025 1021.60216993586 37.465 2 -0.9388552501092811 0.28268381647149166 1.0 ['CON__Q9TRI1'] 3327 6895 AGGVDSRALLQ True NCI_RA007_Epitope_Rep4 1085.58292151849 1085.58182993586 33.139 2 -0.9388628157083039 0.28268381647149166 1.0 ['ENST00000560263.1_1_15:90736385-90736778:+|nuORF'] 75278 6451 NPRELWDMWHP True H1975_Epitope_Rep1 1479.67175360623 1479.6700949037902 29.875 3 -0.9388655843982195 0.28268381647149166 1.0 ['TRPC4|p.S467L|2|0.86|ENSG00000133107|chr13:37663704-37663704|G/A|missense_variant'] 54660 6296 LADVLSAPVP True NCI_RA007_Epitope_Rep2 980.5542471591599 980.55314993586 29.095 2 -0.9389226124162349 0.2826978185457886 1.0 ['ENSG00000198837|ENST00000361217|DENND4B', 'ENST00000485359.1_1_1:153912533-153913115:-|nuORF'] 6531 6013 APVASKSTV True PC9_epitope_Rep3 858.4810822189 858.47998993586 28.182 2 -0.9390150372782267 0.2826978185457886 1.0 ['ENSG00000100625|ENST00000216513|SIX4'] 42881 12614 IFSGGLSPSL True PC9_epitope_Rep1 976.52294703088 976.52184993586 53.388 2 -0.9390338938753048 0.2826978185457886 1.0 ['nc|ENSG00000104946|Q9HA65-3|TBC1D17', 'nc|ENSG00000104946|Q9HA65-2|TBC1D17', 'ENSG00000104946|ENST00000221543|TBC1D17', 'ENST00000596243.5_1_19:50382536-50391878:+|nuORF'] 60294 10758 LIEQYELREEH True PC9_epitope_Rep6 1457.71505788685 1457.7134249037902 52.206 3 -0.9390355576208299 0.2826978185457886 1.0 ['ENSG00000084652|ENST00000373610|TXLNA'] 58102 5969 LERTEGIGP True PC9_epitope_Rep1 970.5083595958998 970.50726993586 27.775 2 -0.9390424014723312 0.2826978185457886 1.0 ['ENST00000595529.1_1_19:41112383-41114583:+|nuORF'] 112817 17057 TPLTPRPFLP True PC9_epitope_Rep1 1137.65462990677 1137.65299490379 70.436 3 -0.9390910600213872 0.2826978185457886 1.0 ['ENST00000427500.7_1_1:155209712-155209820:-|nuORF'] 100008 6256 SLITVSAAK True PC9_epitope_Rep4 888.5280324113199 888.52692993586 31.113 2 -0.9391173829493686 0.2826978185457886 1.0 ['ENST00000474863.5_1_1:222885158-222885545:-|nuORF'] 47945 6763 KAAAKALK True PC9_epitope_Rep4 799.5279728416699 799.52686993586 33.213 2 -0.9391594484778071 0.28272732258418337 1.0 ['nc|ENSG00000185946|Q96LT9-2|RNPC3', 'ENSG00000185946|ENST00000423855|RNPC3'] 72448 6157 MTQDCWERLY True H1975_Epitope_Rep2 1343.56384295003 1343.5627499358602 28.656 2 -0.939161636021342 0.28272732258418337 1.0 ['SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A'] 137810 10195 YPEYLSNFP True H1975_Epitope_Rep2 1128.51277627 1128.51112490379 44.219 3 -0.9391632537658795 0.28272732258418337 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 117513 16291 VAFAHGDI True PC9_epitope_Rep5 828.4130026590799 828.41190993586 67.657 2 -0.9392938954821413 0.2827550278984961 1.0 ['ENSG00000121361|ENST00000240662|KCNJ8'] 27047 7065 FLNLARENP True NCI_RA007_Epitope_Rep1 1072.56654317836 1072.5654499358602 31.476 2 -0.9393071730866105 0.2827550278984961 1.0 ['nc|ENSG00000139278|P48060-2|GLIPR1'] 128042 24544 VRRKGLGK True NCI_RA007_Epitope_Rep3 912.5981180901598 912.5975649679301 106.18 1 -0.9393075146289919 0.2827550278984961 1.0 ['ENST00000544194.5_1_11:63720210-63721948:+|nuORF', 'nc|ENSG00000110583|Q86UY6-4|NAA40', 'nc|ENSG00000110583|Q86UY6-3|NAA40', 'ENST00000534965.5_1_11:63706554-63721948:+|nuORF', 'ENSG00000110583|ENST00000377793|NAA40', 'ENST00000338447.10_1_11:63714317-63721948:+|nuORF'] 32856 12779 GIIFTEDYRTR True NCI_RA007_Epitope_Rep1 1369.6990138998897 1369.69790993586 53.696 2 -0.9393116142429425 0.2827550278984961 1.0 ['ENST00000478486.5_1_6:31940188-31947331:+|nuORF', 'ENST00000469907.1_1_6:31940369-31948823:+|nuORF', 'ENST00000463823.5_1_6:31940225-31947331:+|nuORF', 'ENST00000471028.1_1_6:31940339-31947204:+|nuORF', 'ENST00000484540.5_1_6:31940369-31947331:+|nuORF', 'ENST00000466336.5_1_6:31940188-31948320:+|nuORF', 'ENST00000473983.5_1_6:31940188-31947331:+|nuORF', 'ENST00000491861.5_1_6:31940339-31948823:+|nuORF', 'ENSG00000204344|ENST00000685781|STK19', 'nc|ENSG00000204344|P49842-3|STK19', 'ENST00000466132.5_1_6:31939873-31948823:+|nuORF', 'ENST00000492583.5_1_6:31939873-31948823:+|nuORF', 'nc|ENSG00000204344|P49842-2|STK19', 'nc|ENSG00000204344|P49842-1|STK19'] 61920 14715 LLLLLLLLL True H1975_Epitope_Rep2 1035.7671404778698 1035.76604993586 61.762 2 -0.939322287460927 0.2827550278984961 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-4|SHBG', 'nc|ENSG00000129214|P04278-3|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000129214|P04278-5|SHBG', 'ENSG00000129214|ENST00000380450|SHBG', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000125810|ENST00000246006|CD93', 'ENSG00000109758|ENST00000382774|HGFAC', 'SHBG|p.L175Afs*39|1|0.14|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'CD93|p.E121Rfs*79|1|0.71|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'ENSG00000001036|ENST00000002165|FUCA2', 'PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000182578|ENST00000675795|CSF1R', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000162337|ENST00000294304|LRP5', 'ENSG00000164897|ENST00000297533|TMUB1', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1'] 52903 7260 KRGTFAYVDV True NCI_RA007_Epitope_Rep5 1154.60840799034 1154.60730993586 34.602 2 -0.9393224893631578 0.2827550278984961 1.0 ['ENST00000327705.13_1_5:180486965-180487019:+|nuORF'] 45198 23698 IRIILLYIFLK True H1975_Epitope_Rep3 1403.9268290067496 1403.92519490379 98.835 3 -0.9393323176330632 0.2827550278984961 1.0 ['ENSG00000136854|ENST00000373299|STXBP1', 'nc|ENSG00000136854|P61764-2|STXBP1'] 17930 22595 EIEGSEPPAI True PC9_epitope_Rep5 1040.5026055091198 1040.5015099358602 91.91 2 -0.9393407341869974 0.2827648607150691 1.0 ['CSMD3|p.T304A|1|0.25|ENSG00000164796|chr8:113098763-113098763|T/C|missense_variant'] 33297 15508 GLATPPGHPV True PC9_epitope_Rep5 944.5079656730799 944.50686993586 64.661 2 -0.9393569277666454 0.282765143726611 1.0 ['ENST00000463515.1_1_10:103339125-103339206:-|nuORF'] 61481 10937 LLFLRDTK True NCI_RA007_Epitope_Rep5 1004.60186605792 1004.60076993586 48.708 2 -0.9393639469825678 0.282765143726611 1.0 ['ENSG00000228278|ENST00000431067|ORM2'] 20179 10919 ENQVRTLCE True PC9_epitope_Rep5 1090.5077079728999 1090.50660993586 46.989 2 -0.939365202105291 0.282765143726611 1.0 ['ENSG00000104695|ENST00000221138|PPP2CB'] 136775 14857 YIRDSTIAV True PC9_epitope_Rep4 1036.5553097883198 1036.5542099358602 65.086 2 -0.9394290035554846 0.282765143726611 1.0 ['nc|ENSG00000147127|Q5JT25-2|RAB41', 'ENSG00000147127|ENST00000374473|RAB41'] 79764 17054 PHVALRVAL True PC9_epitope_Rep5 974.60253476426 974.60142993586 70.617 2 -0.9394400299697593 0.282765143726611 1.0 ['ENST00000248248.7_1_16:77225118-77227542:+|nuORF'] 15611 9830 EAVFSALVT True PC9_epitope_Rep2 935.4963979298699 935.49530993586 43.147 2 -0.9394432695554218 0.282765143726611 1.0 ['ENSG00000138095|ENST00000260665|LRPPRC'] 109468 8257 TGVLPERQK True H1975_Epitope_Rep3 1026.5821932425 1026.58108993586 36.746 2 -0.9394737926525565 0.282765143726611 1.0 ['ENSG00000164332|ENST00000296786|UBLCP1'] 37095 11004 GVSLRSLYK True PC9_epitope_Rep2 1021.5920296502101 1021.59092993586 47.648 2 -0.9396057858599026 0.2827889636645239 1.0 ['ENSG00000142185|ENST00000397928|TRPM2', 'nc|ENSG00000142185|O94759-2|TRPM2', 'nc|ENSG00000142185|O94759-3|TRPM2'] 3176 16249 AGEGQERRSPT True PC9_epitope_Rep5 1186.5690623594999 1186.5679699358602 67.491 2 -0.9396540821715689 0.2827889636645239 1.0 ['ENSG00000136040|ENST00000258526|PLXNC1'] 2133 24778 AELTQEIVFQ True H1975_Epitope_Rep3 1176.60265390356 1176.60100490379 103.05 3 -0.9396590805353374 0.2827889636645239 1.0 ['ENST00000368194.7_1_1:157015019-157015145:-|nuORF'] 136794 23352 YISRLRRTV True PC9_epitope_Rep2 1162.69347502698 1162.6923699358601 95.297 2 -0.9396616219342143 0.2827889636645239 1.0 ['CON__ENSEMBL:ENSBTAP00000038253'] 123855 10395 VIYPRTQLP True PC9_epitope_Rep6 1085.62332977849 1085.62222993586 50.717 2 -0.9396726243157597 0.2827889636645239 1.0 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 126751 12067 VPSESLPIT True H1975_Epitope_Rep2 941.50696261357 941.50641496793 51.499 1 -0.939677228853238 0.2827889636645239 1.0 ['nc|ENSG00000105778|Q8NBF6-2|AVL9', 'ENSG00000105778|ENST00000318709|AVL9'] 104688 6692 STAKPSPPEP True PC9_epitope_Rep2 1009.5080252427299 1009.50692993586 31.149 2 -0.9396819907513648 0.2827889636645239 1.0 ['PPP1R10|p.S337P|1|0.05|ENSG00000204569|chr6:30604681-30604681|A/G|missense_variant'] 109253 8677 TFYNFTWERER True H1975_Epitope_Rep3 1547.7157265931899 1547.71462993586 38.375 2 -0.9396954319744003 0.2827889636645239 1.0 ['ENST00000510737.1_1_4:120160395-120160458:+|nuORF'] 106287 11571 SVQSPSTPL True PC9_epitope_Rep4 914.4709114580199 914.46980993586 52.267 2 -0.9397224857300025 0.2827969957787402 1.0 ['ENST00000507177.5_1_5:69321492-69322269:+|nuORF'] 18258 8785 EISRIPYP True H1975_Epitope_Rep2 973.5232813840498 973.52218993586 38.756 2 -0.9397302149380514 0.2827969957787402 1.0 ['ENSG00000197566|ENST00000311331|ZNF624', 'ENST00000579983.1_1_17:16534952-16537956:-|nuORF'] 19449 14409 ELPSHGVPL True PC9_epitope_Rep1 947.5076313199099 947.50652993586 60.247 2 -0.9397595369308062 0.2827969957787402 1.0 ['ENSG00000089053|ENST00000261819|ANAPC5', 'nc|ENSG00000089053|Q9UJX4-3|ANAPC5', 'ENST00000422342.2_1_12:121746285-121747708:-|nuORF', 'ENST00000535641.5_1_12:121746285-121765135:-|nuORF'] 120793 8252 VGDAARQGLRR True NCI_RA007_Epitope_Rep4 1197.6690511842899 1197.6673949037902 38.54 3 -0.9398007600179412 0.2827969957787402 1.0 ['ENST00000482171.5_1_2:130910130-130912221:-|nuORF', 'nc|ENSG00000136699|Q9NXE4-5|SMPD4'] 73627 13607 NGGSFTGP True PC9_epitope_Rep1 735.3187679210699 735.3182149679301 57.195 1 -0.9398061992939217 0.2827969957787402 1.0 ['ENSG00000177311|ENST00000321464|ZBTB38'] 57432 17559 LEILRDLSL True PC9_epitope_Rep1 1070.63356010902 1070.6324699358602 72.333 2 -0.939872509084159 0.28283423559240733 1.0 ['NAA15|p.Q115E|1|0.14|ENSG00000164134|chr4:139341010-139341010|C/G|missense_variant'] 30717 18335 GALTPTPAP True PC9_epitope_Rep5 823.4439684341899 823.44286993586 75.54 2 -0.9398935351078507 0.28284406435874243 1.0 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 32263 13514 GFPKDARRLP True PC9_epitope_Rep5 1155.6512758618298 1155.6496349037902 57.002 3 -0.9399141369649323 0.28285389285567447 1.0 ['ENST00000338353.3_1_1:166135560-166136198:-|nuORF'] 107601 4228 TAGHLPCPPP True H1975_Epitope_Rep2 988.4800366730799 988.47892993586 21.371 2 -0.9399313474930924 0.2828559682061121 1.0 ['PROP1|p.P202T|1|0.32|ENSG00000175325|chr5:177992786-177992786|G/T|missense_variant'] 136311 3526 YGYERQRDYSR True NCI_RA007_Epitope_Rep1 1491.68548909407 1491.68383490379 17.637 3 -0.9399350107806089 0.2828559682061121 1.0 ['RBM38-FRMD4B|1|fusion', 'nc|ENSG00000114541|Q9Y2L6-2|FRMD4B', 'FRMD4B|p.F1023Lfs*3|1|0.27|ENSG00000114541|chr3:69171896-69171897|AA/-|frameshift_variant', 'ENSG00000114541|ENST00000398540|FRMD4B'] 118842 5254 VEEKEKAK True NCI_RA007_Epitope_Rep5 959.5287606873098 959.52766993586 26.906 2 -0.939938453682617 0.2828559682061121 1.0 ['ENSG00000168924|ENST00000302787|LETM1'] 73509 23362 NFFVFKIVIV True PC9_epitope_Rep4 1224.72706657104 1224.7254149037901 98.119 3 -0.9399773182133244 0.28286579600115114 1.0 ['nc|ENSG00000142163|Q8WZA6|OR1E3'] 79954 16135 PISLTHTGIH True PC9_epitope_Rep2 1074.5821932425 1074.58108993586 67.321 2 -0.9400235069595647 0.2828893274132544 1.0 ['ENST00000442218.2_1_12:48174732-48175212:+|nuORF'] 5890 7323 APGSLLHHAS True PC9_epitope_Rep3 988.5090283022402 988.50792993586 33.174 2 -0.9400342512336445 0.28289915448179465 1.0 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENST00000482620.1_1_9:135536593-135545636:-|nuORF', 'nc|ENSG00000125485|Q9H8H2-3|DDX31'] 104382 11485 SSGERWIRY True PC9_epitope_Rep5 1152.5676058075198 1152.56650993586 49.175 2 -0.9401673327849022 0.28297749883520157 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 78096 16717 PANLFEDMDL True PC9_epitope_Rep5 1163.51687567427 1163.51521490379 69.309 3 -0.9401750784717342 0.28298732442617336 1.0 ['nc|ENSG00000141756|Q96AY3-2|FKBP10', 'ENSG00000141756|ENST00000321562|FKBP10', 'ENST00000464180.1_1_17:39977184-39978657:+|nuORF'] 56334 5133 LDRFRDWQ True PC9_epitope_Rep5 1134.5570411238198 1134.55594993586 24.767 2 -0.940211242588799 0.2829992189533976 1.0 ['nc|ENSG00000177663|Q96F46-2|IL17RA', 'ENSG00000177663|ENST00000319363|IL17RA'] 47069 5762 IVTTSNNHI True PC9_epitope_Rep1 997.5192586327701 997.51816993586 26.98 2 -0.9402578927221689 0.2829992189533976 1.0 ['nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'ENST00000442459.2_1_1:16342077-16343748:-|nuORF'] 55891 8210 LDGEWGTNP True PC9_epitope_Rep2 987.42977492203 987.42866993586 36.938 2 -0.9402619925959015 0.2829992189533976 1.0 ['ENSG00000146247|ENST00000275034|PHIP'] 114533 22217 TSHGLRRHPS True H1975_Epitope_Rep2 1146.6006372713 1146.59899490379 91.814 3 -0.9402656103434381 0.2829992189533976 1.0 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 45287 6210 ISAGGYIK True PC9_epitope_Rep1 807.44905381463 807.44794993586 28.701 2 -0.9402834658724946 0.2830090435735818 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 32796 8469 GIEAPEEHG True PC9_epitope_Rep4 937.4141248578899 937.41302993586 40.045 2 -0.9403130798505792 0.2830111121768083 1.0 ['ENST00000570164.5_1_16:31501628-31501862:-|nuORF'] 133929 8869 WNSSFLEQL True PC9_epitope_Rep2 1122.53457434374 1122.53346993586 39.468 2 -0.9403327486700018 0.2830111121768083 1.0 ['nc|nan|Q96LP6-2|C12orf42', 'ENSG00000179088|ENST00000548883|C12orf42'] 95514 12522 SAPVPQTPL True PC9_epitope_Rep6 908.4967322830399 908.49562993586 59.6 2 -0.9403506089357093 0.2830111121768083 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'nc|ENSG00000141449|Q9C091-4|GREB1L', 'ENST00000578368.5_1_18:18963479-19048745:+|nuORF', 'ENST00000584446.5_1_18:18963479-19034595:+|nuORF'] 6974 5417 AQPLGGPG True NCI_RA007_Epitope_Rep5 695.3602388102299 695.3596949679301 27.526 1 -0.9404064688836858 0.28303463772881726 1.0 ['ENSG00000113722|ENST00000231656|CDX1'] 36121 7627 GVEPQEDQ True NCI_RA007_Epitope_Rep5 900.3824903764398 900.3813899358599 36.037 2 -0.9404722549957388 0.28307186408166063 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 76876 18789 NVINVHPGVV True PC9_epitope_Rep4 1046.58727862294 1046.5861899358601 80.357 2 -0.940522559374782 0.2830778083768342 1.0 ['ENST00000366628.9_1_1:233115559-233115757:+|nuORF'] 93198 23410 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 96.51 2 -0.9405495774943249 0.2830778083768342 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 63762 16286 LPRRTAAA True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50808496793 69.401 1 -0.9406490563204303 0.2831424343727736 1.0 ['ENST00000593841.1_2_19:51870593-51871198:-|nuORF'] 93998 25524 RVPVGGGP True H1975_Epitope_Rep1 737.41842239269 737.4178749679301 105.78 1 -0.9407034905894585 0.2831933579032457 1.0 ['ENSG00000236104|ENST00000431845|ZBTB22'] 119267 6156 VELELTEFHYF True NCI_RA007_Epitope_Rep1 1425.6816325002499 1425.67999490379 27.982 3 -0.9407647858922075 0.2832228189390618 1.0 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 11011 443 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 2.4319 2 -0.9407698960319482 0.2832228189390618 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 32030 6210 GEVGDLKQL True NCI_RA007_Epitope_Rep3 957.51311062317 957.51200993586 31.435 2 -0.9407896747540179 0.2832228189390618 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2'] 92123 25071 RPYRTLQVV True NCI_RA007_Epitope_Rep1 1130.6560268890998 1130.65492993586 103.76 2 -0.9408314620296614 0.28324633869001137 1.0 ['ENSG00000232434|ENST00000436881|AJM1'] 37441 6927 GWVEMEMIWKY True H1975_Epitope_Rep3 1470.6675797425796 1470.66592490379 31.605 3 -0.9408672370182561 0.2832483971724478 1.0 ['ENST00000372634.1_2_X:102631969-102632642:+|nuORF', 'ENST00000372635.1_2_X:102631496-102632642:+|nuORF'] 24973 25742 FDDGDCCD True NCI_RA007_Epitope_Rep3 888.226583982 888.22548993586 111.34 2 -0.9408764182658937 0.2832483971724478 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 131383 6436 VVSQPPDT True PC9_epitope_Rep5 841.41814760917 841.4175949679301 29.73 1 -0.9408921400544068 0.2832483971724478 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 3514 5864 AGLRTTLP True NCI_RA007_Epitope_Rep5 827.4865019525099 827.48540993586 29.241 2 -0.9409294590465266 0.28326803474067785 1.0 ['IL18BP|p.A174T|1|0.16|ENSG00000137496|chr11:72001796-72001796|G/A|missense_variant'] 136639 20237 YIDKLEYL True NCI_RA007_Epitope_Rep1 1055.55391280599 1055.55280993586 82.922 2 -0.9409743936430197 0.28326803474067785 1.0 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000484741.1_1_10:5496419-5498268:+|nuORF'] 125579 21069 VLYRVALAI True PC9_epitope_Rep2 1016.6382515666397 1016.63714993586 86.498 2 -0.941024632035521 0.2832956646805013 1.0 ['nc|ENSG00000162065|Q9ULP9-2|TBC1D24', 'ENSG00000162065|ENST00000646147|TBC1D24'] 33970 17549 GNFKFWDTEL True PC9_epitope_Rep3 1255.5873381925899 1255.58624993586 72.688 2 -0.9410313699744085 0.2832956646805013 1.0 ['ENST00000262394.6_2_17:25639733-25639799:+|nuORF'] 61514 9836 LLFYHFWRYFH True NCI_RA007_Epitope_Rep2 1627.80883913239 1627.8071849037901 42.886 3 -0.941043875798592 0.2832956646805013 1.0 ['RB1-CNIH3|1|fusion', 'ENSG00000143786|ENST00000272133|CNIH3'] 131407 1090 VVTKEKLLLE True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 5.7682 3 -0.9411030189873235 0.2832956646805013 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 43948 22255 ILEVMNPPPKK True PC9_epitope_Rep5 1264.7213295676 1264.72022993586 90.611 2 -0.9411170243515226 0.2832956646805013 1.0 ['ENST00000602599.1_1_2:61194615-61239025:-|nuORF', 'ENSG00000162927|ENST00000316752|PUS10'] 16731 2801 EEWPWNRK True NCI_RA007_Epitope_Rep1 1143.5461420869499 1143.54504993586 14.747 2 -0.9411284518200281 0.2832956646805013 1.0 ['nc|ENSG00000168843|Q8N475-3|FSTL5', 'nc|ENSG00000168843|Q8N475-2|FSTL5', 'ENSG00000168843|ENST00000306100|FSTL5'] 11143 20292 DEFLRLLLT True PC9_epitope_Rep1 1118.6335601090198 1118.6324699358602 82.88 2 -0.9411383006561456 0.2832956646805013 1.0 ['ENSG00000173611|ENST00000336505|SCAI', 'nc|ENSG00000173611|Q8N9R8-2|SCAI'] 116565 7579 TYFYKRKEYWK True NCI_RA007_Epitope_Rep2 1610.8245487661795 1610.82344993586 34.108 2 -0.9411966474400142 0.2833328767498562 1.0 ['MMP16|p.G504R|1|0.24|ENSG00000156103|chr8:88041775-88041775|C/T|missense_variant'] 119238 3683 VEKYEEMLKTK True NCI_RA007_Epitope_Rep2 1396.72720279368 1396.72555490379 18.975 3 -0.9412224622469327 0.28333881218496604 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 67794 16916 LTHRPDILI True PC9_epitope_Rep2 1076.6342288153598 1076.63312993586 70.312 2 -0.9412285238074309 0.28333881218496604 1.0 ['nc|ENSG00000105366|Q9NYZ4-3|SIGLEC8', 'ENSG00000105366|ENST00000321424|SIGLEC8'] 20821 8891 EQPEDCTMQL True H1975_Epitope_Rep1 1192.4740248861199 1192.47292993586 39.109 2 -0.9412674791075651 0.28334862825131146 1.0 ['nc|ENSG00000204843|Q14203-5|DCTN1', 'nc|ENSG00000204843|Q14203-2|DCTN1', 'nc|ENSG00000204843|Q14203-3|DCTN1', 'nc|ENSG00000204843|Q14203-4|DCTN1', 'nc|ENSG00000204843|Q14203-6|DCTN1', 'ENSG00000204843|ENST00000628224|DCTN1', 'ENST00000466110.5_1_2:74593906-74595252:-|nuORF'] 3444 11778 AGLESHHCL True PC9_epitope_Rep1 965.4389001370901 965.43780993586 50.175 2 -0.941283179356861 0.2833584440487604 1.0 ['ENST00000533086.5_1_19:15225833-15226058:-|nuORF'] 15530 4488 EARSPQPNK True NCI_RA007_Epitope_Rep5 1025.52540664237 1025.5243099358602 23.913 2 -0.9413489535062896 0.2833703125428 1.0 ['nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1'] 93194 22296 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 92.141 2 -0.9413543995963537 0.2833703125428 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 91008 18435 RLKHEHIERRR True NCI_RA007_Epitope_Rep3 1528.8811096391998 1528.88000993586 80.695 2 -0.9413572960628215 0.2833703125428 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 19934 11937 ELYQTFQRI True PC9_epitope_Rep6 1196.61897267404 1196.61733490379 57.162 3 -0.9413661314064466 0.2833703125428 1.0 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant'] 118861 11571 VEEKWRLLP True H1975_Epitope_Rep3 1168.6604435631998 1168.65934993586 49.636 2 -0.9414322314738244 0.28347826086956524 1.0 ['ENSG00000013503|ENST00000228347|POLR3B'] 78861 10215 PESGRLPQQQN True H1975_Epitope_Rep3 1252.61601255192 1252.6149099358602 44.338 2 -0.9414630027604023 0.28347826086956524 1.0 ['ENST00000304895.8_1_7:65425676-65425877:-|nuORF'] 138638 21022 YRRNFNYRRRR True H1975_Epitope_Rep1 1655.8981566856698 1655.8970499358602 87.312 2 -0.941463704959545 0.28347826086956524 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 83857 5624 QEGSEYWDRET True H1975_Epitope_Rep1 1398.56878757598 1398.56768993586 26.7 2 -0.9414700847725401 0.28347826086956524 1.0 ['ENSG00000204592|ENST00000376630|HLA-E', 'HLA-E|p.K264Lfs*27|2|0.12|ENSG00000204592|chr6:30491313-30491322|CAGAAGTGGG/-|frameshift_variant', 'ENST00000484194.1_1_6:30457308-30457777:+|nuORF'] 101250 13534 SLWIKRDVWMK True NCI_RA007_Epitope_Rep2 1460.7962258433597 1460.7951299358601 57.287 2 -0.9414835539996702 0.28347826086956524 1.0 ['ENST00000421648.1_1_7:143104969-143112281:+|nuORF', 'ENST00000429289.5_1_7:143104932-143112281:+|nuORF'] 91031 17212 RLKTAAAAAA True NCI_RA007_Epitope_Rep5 942.5610638750998 942.55996993586 72.978 2 -0.9414966235488517 0.28347826086956524 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 106320 7466 SVSASVFTL True PC9_epitope_Rep2 909.48074786573 909.47964993586 34.091 2 -0.9415054646816102 0.28347826086956524 1.0 ['ENSG00000148734|ENST00000277942|NPFFR1'] 22471 17348 ETHHWHDYQY True H1975_Epitope_Rep2 1414.5690623595 1414.5679699358602 72.024 2 -0.941518929504901 0.28347826086956524 1.0 ['ENST00000607742.5_1_6:158538757-158579378:-|nuORF', 'nc|ENSG00000122335|Q96JX3-2|SERAC1', 'ENSG00000122335|ENST00000647468|SERAC1'] 71016 21320 MERPGTAGS True NCI_RA007_Epitope_Rep5 904.4072656556399 904.40616993586 89.064 2 -0.9415460230807166 0.28347826086956524 1.0 ['ENST00000304623.12_2_5:11236860-11236926:-|nuORF'] 133467 3424 WGPFHCGH True PC9_epitope_Rep2 939.3809913381499 939.37988993586 18.447 2 -0.9415523918350305 0.28347826086956524 1.0 ['chr1:103745515-103750424|173|21.9|0.0|21.06|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|39', 'chr1:103745227-103750424|306|24.34|0.0|21.21|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|39', 'chr1:103651377-103750424|112|20.44|0.0|20.96|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|39', 'chr1:103651250-103750424|129|11.88|0.0|20.18|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|39', 'chr1:103651089-103750424|267|25.88|0.0|21.3|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|39'] 65219 17554 LSEAQLSLIR True PC9_epitope_Rep3 1128.65027280232 1128.64861490379 72.707 3 -0.9415525477236933 0.28347826086956524 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 95147 24459 SAAAFSYVQTP True H1975_Epitope_Rep2 1140.5451390274397 1140.54349490379 100.62 3 -0.941593206080092 0.2835017664941254 1.0 ['ENSG00000166398|ENST00000299505|GARRE1', 'ENST00000588974.1_1_19:34839831-34843857:+|nuORF'] 80188 14327 PLADITQDF True H1975_Epitope_Rep2 1018.4971262058599 1018.49602993586 60.259 2 -0.9416191709964977 0.28352527147493395 1.0 ['CLTC-VMP1|20|fusion'] 12457 14072 DKPKQRRPRCK True NCI_RA007_Epitope_Rep2 1410.79901980802 1410.79792993586 59.396 2 -0.9416272489354297 0.28353508243413483 1.0 ['ENSG00000124177|ENST00000373233|CHD6', 'ENST00000480022.1_1_20:40033235-40042188:-|nuORF'] 38966 21645 HIVTQVHCW True PC9_epitope_Rep2 1121.54403391197 1121.54292993586 88.732 2 -0.9416733253641072 0.2835448931246491 1.0 ['ENST00000319074.5_1_14:23567332-23567638:+|nuORF'] 68202 9966 LTQKLWTA True PC9_epitope_Rep6 959.5440168286299 959.54290993586 48.876 2 -0.9416789887911025 0.283550820884282 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4', 'EIF2AK4|p.E1573*|1|0.21|ENSG00000128829|chr15:40032223-40032224|-/T|frameshift_variant'] 82799 16846 PVSAPVPIS True PC9_epitope_Rep5 865.49091862661 865.49037496793 69.807 1 -0.9416944519484372 0.283550820884282 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant'] 140044 3591 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 18.161 3 -0.9417409306267985 0.28355879292403746 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 56277 10939 LDQLIKIH True H1975_Epitope_Rep1 978.5862159937801 978.58510993586 47.04 2 -0.9417443792695737 0.28355879292403746 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 63143 19194 LNRCRMHAI True PC9_epitope_Rep5 1112.56953746716 1112.5684299358602 78.869 2 -0.9417691621664217 0.28355879292403746 1.0 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF', 'nc|ENSG00000123989|Q8IZ52-2|CHPF'] 137616 10795 YLVHAHYVP True PC9_epitope_Rep1 1097.56581490237 1097.56470993586 46.41 2 -0.9417773920964667 0.28355879292403746 1.0 ['ENST00000379982.7_1_5:95072755-95084126:+|nuORF'] 93151 15325 RRRRNDRRRQQ True H1975_Epitope_Rep3 1595.90536732443 1595.9042699358602 64.357 2 -0.9417775684657089 0.28355879292403746 1.0 ['ENSG00000134030|ENST00000256413|CTIF', 'nc|ENSG00000134030|O43310-2|CTIF'] 109138 17379 TFLFEDFSK True PC9_epitope_Rep6 1132.54407639828 1132.5429699358601 79.464 2 -0.9418205358496962 0.2835959855963416 1.0 ['ENSG00000109084|ENST00000226230|TMEM97'] 19054 7642 ELGPQERR True H1975_Epitope_Rep3 983.51484195867 983.51374993586 34.377 2 -0.9419153470720468 0.28363317725019854 1.0 ['ENST00000527038.6_2_11:118926784-118927823:-|nuORF'] 7440 9955 ASDFQFCWNQ True H1975_Epitope_Rep2 1244.49205790876 1244.4909699358602 43.283 2 -0.9419475209615228 0.2836391018619934 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'ENST00000481242.5_1_9:130127572-130155530:+|nuORF', 'ENST00000496711.5_1_9:130126995-130155530:+|nuORF'] 28569 24957 FSMVMSLD True PC9_epitope_Rep3 928.40342614516 928.4023299358599 101.35 2 -0.9419530193908532 0.2836391018619934 1.0 ['nc|ENSG00000133454|Q8IUG5-2|MYO18B', 'ENSG00000133454|ENST00000335473|MYO18B', 'nc|ENSG00000133454|Q8IUG5-3|MYO18B'] 125552 21285 VLWWKYEL True PC9_epitope_Rep5 1135.60661708519 1135.6055299358602 86.926 2 -0.9419768133242186 0.2836489095165729 1.0 ['ENST00000488171.5_1_1:207495110-207510876:+|nuORF'] 111285 12623 TLHELLERI True PC9_epitope_Rep5 1122.6397081186199 1122.63805490379 53.556 3 -0.9420136802659251 0.2836724076558692 1.0 ['SASH3|p.L266M|1|0.44|ENSG00000122122|chrX:129792831-129792831|C/A|missense_variant', 'ENSG00000122122|ENST00000356892|SASH3'] 133672 9221 WKVKLPPQK True NCI_RA007_Epitope_Rep1 1122.6913497686598 1122.68971490379 39.867 3 -0.9420757206928533 0.2836959051517599 1.0 ['nc|ENSG00000143409|Q8N5J2-2|MINDY1', 'nc|ENSG00000143409|Q8N5J2-4|MINDY1', 'ENSG00000143409|ENST00000683666|MINDY1', 'nc|ENSG00000143409|Q8N5J2-3|MINDY1'] 14578 19085 DVFSFRKAASL True PC9_epitope_Rep5 1239.6611718391898 1239.66006993586 78.44 2 -0.9421165355095144 0.28370571162586933 1.0 ['ENST00000521104.1_1_6:56504020-56557947:-|nuORF', 'nc|ENSG00000151914|Q03001-13|DST'] 41819 8417 IDSILEVVQT True NCI_RA007_Epitope_Rep4 1115.60740493083 1115.60630993586 39.189 2 -0.9421332156423698 0.28372532376858417 1.0 ['ENSG00000105926|ENST00000222644|PALS2'] 30901 15825 GARVRREL True NCI_RA007_Epitope_Rep4 955.5675462378698 955.56644993586 68.729 2 -0.9421416198632951 0.28372532376858417 1.0 ['ENSG00000058453|ENST00000375541|CROCC', 'ENST00000494191.6_1_1:17270607-17280126:+|nuORF'] 7630 16331 ASLFWFLFFLF True NCI_RA007_Epitope_Rep1 1436.7532813188798 1436.75218993586 67.635 2 -0.9421721809032781 0.28374493483736724 1.0 ['ENST00000594496.5_1_19:6414689-6414863:-|nuORF'] 58083 11863 LERRHRLQ True H1975_Epitope_Rep1 1106.6421081604599 1106.6410099358602 50.63 2 -0.9421810350851823 0.28374493483736724 1.0 ['nc|ENSG00000124091|Q6ZNI0|GCNT7', 'ENSG00000124091|ENST00000243913|GCNT7'] 125789 5737 VNLKCNADANP True NCI_RA007_Epitope_Rep1 1157.5499071380498 1157.5488099358602 26.373 2 -0.9423380018971043 0.283750855578371 1.0 ['nc|ENSG00000177707|Q9NQS3-2|NECTIN3', 'nc|ENSG00000177707|Q9NQS3-3|NECTIN3', 'ENSG00000177707|ENST00000485303|NECTIN3'] 82510 13094 PVETFLEF True PC9_epitope_Rep5 980.4854988929999 980.48440993586 55.37 2 -0.9423404099480406 0.283750855578371 1.0 ['UBR4|p.S5156L|1|0.3|ENSG00000127481|chr1:19076760-19076760|G/A|missense_variant'] 114084 10827 TRRAAAAI True NCI_RA007_Epitope_Rep4 828.4929843152798 828.49188993586 48.497 2 -0.9423490411305129 0.2837567759951815 1.0 ['chr1:1204486-1206385|116|17.83|0.05|8.49|-|0|TNFRSF18,TNFRSF18|1'] 112416 24768 TNHVLLKLRRP True NCI_RA007_Epitope_Rep5 1345.8306372061297 1345.82954993586 102.76 2 -0.9423505685182573 0.2837567759951815 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 115899 6727 TVPGPTLAPQ True NCI_RA007_Epitope_Rep1 979.5338460677499 979.53274993586 30.177 2 -0.9424594627224975 0.28377638459221943 1.0 ['ENSG00000078081|ENST00000265598|LAMP3'] 16950 6819 EGFSRYLGGEE True H1975_Epitope_Rep1 1242.55168095986 1242.5505899358602 31.271 2 -0.9424668908070161 0.28377638459221943 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 77973 6723 PALHSENP True PC9_epitope_Rep3 863.41373093507 863.41262993586 30.881 2 -0.9425544267122601 0.28378230398598336 1.0 ['ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF', 'ENST00000521713.1_1_7:6179681-6199085:+|nuORF'] 126643 23707 VPQLSALPEL True PC9_epitope_Rep2 1065.60701100801 1065.6059099358602 96.659 2 -0.9425848640545581 0.28378230398598336 1.0 ['ENST00000493538.5_1_2:25799677-25799803:-|nuORF', 'ENST00000496972.6_1_2:25754434-25799812:-|nuORF'] 25026 17258 FDDGDCCD True PC9_epitope_Rep3 888.226583982 888.22548993586 71.538 2 -0.9426067366578134 0.28380579547476625 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 14436 12858 DTLQQREQQLL True NCI_RA007_Epitope_Rep2 1370.7153922400198 1370.71428993586 54.634 2 -0.9426408642286807 0.2838137472283814 1.0 ['ENST00000445336.2_1_X:74802783-74803698:+|nuORF'] 18666 7261 ELCKYFLCQEY True H1975_Epitope_Rep1 1437.63085988069 1437.6297699358602 32.939 2 -0.9426524125475412 0.2838137472283814 1.0 ['ENSG00000124201|ENST00000396105|ZNFX1'] 111366 5797 TLIMVTMLP True NCI_RA007_Epitope_Rep2 1017.56026113973 1017.55916993586 27.167 2 -0.9426764765554216 0.2838137472283814 1.0 ['ENST00000468323.5_1_3:149683870-149683927:-|nuORF'] 120838 8301 VGDNRVVL True PC9_epitope_Rep1 870.4923156089399 870.49120993586 36.763 2 -0.9426997179011508 0.2838137472283814 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.P5041T|1|0.35|ENSG00000117983|chr11:1252884-1252884|C/A|missense_variant'] 136728 9443 YILRQEGTRC True NCI_RA007_Epitope_Rep1 1237.62374078465 1237.6226499358602 40.725 2 -0.9427251929576451 0.2838137472283814 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'OBSCN|p.H4054Tfs*31|1|0.21|ENSG00000154358|chr1:228307133-228307133|C/-|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 25780 19509 FFTVIFQWLKV True PC9_epitope_Rep4 1426.80129414046 1426.80018993586 83.161 2 -0.942759343829765 0.28384315335660026 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 61522 18875 LLGARQMGVP True PC9_epitope_Rep1 1040.5800850675198 1040.5789899358601 77.387 2 -0.9427835231585721 0.28384315335660026 1.0 ['ENST00000560192.5_1_15:91447248-91454469:+|nuORF'] 20387 12724 EPKYRFER True PC9_epitope_Rep5 1123.57744221523 1123.5763499358602 53.95 2 -0.9427889576960626 0.28384315335660026 1.0 ['nc|ENSG00000203970|Q30KQ9-2|DEFB110'] 128511 10140 VSGFAPRR True PC9_epitope_Rep4 888.49298431528 888.49188993586 46.682 2 -0.9428110178709981 0.2838529548627268 1.0 ['chr17:76737086-76738282|359|16.52|0.0|20.66|+|1|None,MFSD11|1'] 75198 16185 NNVNKLLI True PC9_epitope_Rep4 926.5549158654999 926.55380993586 70.199 2 -0.9428285796193637 0.2838570177359317 1.0 ['ENSG00000076356|ENST00000367033|PLXNA2', 'nc|ENSG00000076356|O75051-2|PLXNA2'] 78875 8631 PETALWGP True NCI_RA007_Epitope_Rep1 869.42831837005 869.4272299358599 37.574 2 -0.942833191401554 0.2838570177359317 1.0 ['ENSG00000102870|ENST00000262525|ZNF629'] 84379 7225 QGARPPLL True NCI_RA007_Epitope_Rep4 850.50248636982 850.50138993586 34.423 2 -0.942873183992119 0.2838570177359317 1.0 ['ENST00000467237.5_1_7:150776633-150777020:-|nuORF'] 68398 11345 LTSVMSVARPS True PC9_epitope_Rep5 1146.60669373818 1146.60558993586 48.635 2 -0.9429003934117322 0.2838570177359317 1.0 ['ENST00000438150.2_1_19:53302810-53303101:-|nuORF'] 73354 28017 NEPAYVWLWL True PC9_epitope_Rep5 1289.6444591458899 1289.64280490379 115.69 3 -0.9429219971037689 0.2838570177359317 1.0 ['ENSG00000140284|ENST00000267842|SLC27A2', 'nc|ENSG00000140284|O14975-2|SLC27A2', 'SLC27A2|p.L124Afs*50|1|0.14|ENSG00000140284|chr15:50182792-50182793|-/G|frameshift_variant'] 12056 14893 DIDVVKDPV True PC9_epitope_Rep5 998.5284263341399 998.5273299358599 62.289 2 -0.9429794880322017 0.2838570177359317 1.0 ['ENSG00000092850|ENST00000207457|TEKT2'] 33802 6849 GLTGTPGPPG True PC9_epitope_Rep5 852.4341320264798 852.4335849679301 31.315 1 -0.9430106108191979 0.2838668181133935 1.0 ['COL4A3|p.P237T|1|0.22|ENSG00000169031|chr2:227253582-227253582|C/A|missense_variant'] 67748 5952 LTGRPSPSPP True H1975_Epitope_Rep2 1007.5399940773499 1007.53888993586 27.877 2 -0.9430391079828436 0.28387661822262367 1.0 ['ENST00000532094.5_1_11:420655-431830:-|nuORF', 'ENST00000525857.1_1_11:429545-429995:-|nuORF'] 119395 5464 VENWQGNPIQK True NCI_RA007_Epitope_Rep2 1311.6571490879098 1311.6560499358602 25.871 2 -0.9430562918622515 0.28388641806363324 1.0 ['ENSG00000129933|ENST00000262815|MAU2'] 110439 9704 TINQWVKG True H1975_Epitope_Rep1 944.5079656730799 944.50686993586 42.252 2 -0.9430989826783798 0.2838962176364333 1.0 ['ENSG00000021355|ENST00000380739|SERPINB1', 'ENST00000468511.5_1_6:2833828-2838227:-|nuORF'] 7742 7809 ASSSTMSLKKN True H1975_Epitope_Rep1 1152.58087291316 1152.5797699358602 34.991 2 -0.9431777050756204 0.28391227614135417 1.0 ['nc|ENSG00000132554|Q8NE09-3|RGS22', 'ENSG00000132554|ENST00000360863|RGS22'] 47355 14750 IYHREEKRWRW True H1975_Epitope_Rep3 1657.8589772122898 1657.8578899358602 62.112 2 -0.9431941537923939 0.28391227614135417 1.0 ['nc|ENSG00000258227|Q9NY25-2|CLEC5A', 'ENSG00000258227|ENST00000546910|CLEC5A'] 13601 17831 DPRRRNKSI True NCI_RA007_Epitope_Rep3 1140.64758746372 1140.64707496793 78.181 1 -0.9432730188944322 0.28391227614135417 1.0 ['ENST00000440687.1_1_20:44728270-44728609:+|nuORF'] 56011 13001 LDKDDDADY True H1975_Epitope_Rep2 1068.4247491112399 1068.42364993586 55.125 2 -0.9432751215829539 0.28391227614135417 1.0 ['ENSG00000148606|ENST00000372371|POLR3A'] 29886 17295 FVYKYEIPLV True PC9_epitope_Rep2 1269.70091139285 1269.69980993586 71.783 2 -0.9432756985434348 0.28391227614135417 1.0 ['ZBTB41|p.I360Yfs*14|1|0.09|ENSG00000177888|chr1:197199396-197199396|T/-|frameshift_variant', 'nc|ENSG00000177888|Q5SVQ8-2|ZBTB41', 'ENST00000467322.1_1_1:197145142-197169603:-|nuORF', 'ENSG00000177888|ENST00000367405|ZBTB41'] 55620 11541 LCVSDGDF True NCI_RA007_Epitope_Rep4 854.3480194440199 854.34692993586 51.338 2 -0.9432899838476032 0.28391227614135417 1.0 ['ENST00000430767.8_1_17:75212554-75212710:+|nuORF'] 61685 16794 LLHYYLLNYAK True H1975_Epitope_Rep1 1409.7707222881702 1409.7696299358602 70.002 2 -0.9433830604752421 0.28391227614135417 1.0 ['ENSG00000179941|ENST00000650064|BBS10'] 111188 10180 TLFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep1 1081.5113966504398 1081.51028993586 44.097 2 -0.9434234580474333 0.28391227614135417 1.0 ['CON__P02769'] 125766 12397 VNIQAQAQSI True PC9_epitope_Rep2 1070.5720224816198 1070.57092993586 52.994 2 -0.9434244428256275 0.28391227614135417 1.0 ['ENSG00000170920|ENST00000305444|OR7G3'] 80552 16268 PLLVSGIG True PC9_epitope_Rep5 754.45889022234 754.45778993586 67.567 2 -0.9435536208508081 0.28391227614135417 1.0 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF'] 133689 21993 WLAANNGD True PC9_epitope_Rep2 859.38243080679 859.38132993586 90.07 2 -0.9435564293233004 0.28391227614135417 1.0 ['DELE1|p.S441Afs*3|1|0.13|ENSG00000081791|chr5:141938525-141938525|G/-|frameshift_variant', 'ENSG00000081791|ENST00000432126|DELE1'] 80225 13853 PLARQVLG True PC9_epitope_Rep3 852.5181364339599 852.51702993586 58.366 2 -0.9435630143008247 0.28391227614135417 1.0 ['ENST00000508139.1_1_5:176518793-176520368:+|nuORF'] 5386 14874 ALVFSIMSL True PC9_epitope_Rep5 979.5412399473099 979.54014993586 62.215 2 -0.943587845309545 0.28391227614135417 1.0 ['ENST00000453450.2_1_12:120031743-120072065:+|nuORF', 'ENSG00000224982|ENST00000426426|TMEM233'] 10155 26449 CCCCCGGG True H1975_Epitope_Rep1 704.1208797689599 704.1203249679301 110.01 1 -0.9435931244046919 0.28391227614135417 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 56725 3620 LEAHIWQEEEE True NCI_RA007_Epitope_Rep2 1411.62557417611 1411.6239149037901 18.732 3 -0.9436014563303523 0.28391227614135417 1.0 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 139247 13342 YTCVSYLQ True H1975_Epitope_Rep2 975.4371688015899 975.43661496793 56.452 1 -0.9436119358281176 0.28391227614135417 1.0 ['ENST00000508604.5_1_4:77039101-77051958:-|nuORF'] 128014 18262 VRRAGLGP True H1975_Epitope_Rep2 824.4980696957199 824.49696993586 75.712 2 -0.9436254996873061 0.28391227614135417 1.0 ['ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 103682 8030 SRDQEDEEDE True PC9_epitope_Rep3 1250.4534830402197 1250.45238993586 35.863 2 -0.9436711502475629 0.2839494349741429 1.0 ['ENSG00000130528|ENST00000252825|HRC'] 16077 12249 EEDEWAVP True H1975_Epitope_Rep3 973.4028914678498 973.40234496793 52.293 1 -0.9436873834585264 0.2839592311375607 1.0 ['ENSG00000198933|ENST00000578982|TBKBP1'] 45540 15071 ISFWNFKMRPK True NCI_RA007_Epitope_Rep2 1452.77001109552 1452.7689099358602 63.308 2 -0.9437477923633115 0.28398270767210243 1.0 ['ENSG00000255837|ENST00000538986|TAS2R20'] 98761 7425 SISENLQRI True PC9_epitope_Rep4 1058.5720224816198 1058.57092993586 35.91 2 -0.943825293803268 0.28399841311098645 1.0 ['EMILIN2|p.G721E|1|0.43|ENSG00000132205|chr18:2892289-2892289|G/A|missense_variant'] 15360 8287 EALGSRHR True H1975_Epitope_Rep3 924.488961564 924.48786993586 36.86 2 -0.943833094275053 0.28399841311098645 1.0 ['PIP5K1B|p.D450Y|1|0.45|ENSG00000107242|chr9:68935036-68935036|G/T|missense_variant', 'nc|ENSG00000107242|O14986-3|PIP5K1B', 'ENSG00000107242|ENST00000265382|PIP5K1B', 'nc|ENSG00000107242|O14986-2|PIP5K1B'] 77863 8787 PAGLGNAPV True PC9_epitope_Rep2 794.42865272322 794.42754993586 39.153 2 -0.9438987594185738 0.28399841311098645 1.0 ['ENST00000456353.5_1_10:80721072-80808596:-|nuORF'] 29744 11735 FVQLHKLV True NCI_RA007_Epitope_Rep1 982.5963867546599 982.59528993586 49.622 2 -0.9440629514179005 0.2840943287828632 1.0 ['ENSG00000128011|ENST00000248668|LRFN1'] 46066 10334 ISWYRIFP True NCI_RA007_Epitope_Rep5 1080.57565131008 1080.5745499358602 46.38 2 -0.9440900391078242 0.2840943287828632 1.0 ['LCT|p.S981Y|1|0.14|ENSG00000115850|chr2:135809405-135809405|G/T|missense_variant'] 26396 22094 FIKCYYISE True PC9_epitope_Rep1 1164.5525329069999 1164.55087490379 89.797 3 -0.944115531022686 0.2840943287828632 1.0 ['ENST00000290858.10_1_16:67133987-67134095:+|nuORF'] 30386 5994 GAESVTKEK True H1975_Epitope_Rep3 947.4923751785899 947.49126993586 28.069 2 -0.9441470038070856 0.2840943287828632 1.0 ['ENST00000528717.1_1_11:102323683-102332276:+|nuORF'] 74681 9107 NLIGHAHPN True H1975_Epitope_Rep1 971.4937125912701 971.49260993586 39.934 2 -0.9441683022078001 0.2840943287828632 1.0 ['nc|ENSG00000187821|A6NFD8-4|HELT', 'ENSG00000187821|ENST00000515777|HELT'] 140042 3453 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 17.49 3 -0.9441721455957672 0.2840943287828632 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 126898 16965 VPTTSLVL True PC9_epitope_Rep6 828.49566965388 828.49456993586 77.801 2 -0.9441760460652288 0.2840943287828632 1.0 ['ENST00000369528.9_2_1:115314278-115314449:-|nuORF'] 86766 3290 QRLRMVWRRKR True NCI_RA007_Epitope_Rep2 1583.9419360739496 1583.93973987172 17.461 4 -0.9441808277242878 0.2841041213563681 1.0 ['ENST00000285689.7_2_5:125759302-125805397:+|nuORF', 'ENST00000544396.5_2_5:125759302-125807964:+|nuORF', 'nc|ENSG00000155324|Q96HH9-2|GRAMD2B'] 50479 10264 KKKKKKKKKKH True NCI_RA007_Epitope_Rep1 1436.0191066821499 1436.0180099358602 43.935 2 -0.9442560594102712 0.2841549488428079 1.0 ['ENSG00000164609|ENST00000297151|SLU7'] 62454 11543 LLSKQMFNPYY True H1975_Epitope_Rep1 1402.69550874258 1402.6944099358602 49.385 2 -0.9443250498169363 0.28420577493879 1.0 ['NEDD4L|p.E674Q|1|0.27|ENSG00000049759|chr18:58366185-58366185|G/C|missense_variant'] 128969 14764 VSVRRKRQV True H1975_Epitope_Rep2 1126.70470841702 1126.7036099358602 61.948 2 -0.94437096187528 0.2842155655861031 1.0 ['ENSG00000146250|ENST00000369700|PRSS35'] 56819 18624 LECGKVFKHRS True NCI_RA007_Epitope_Rep5 1302.6866753943798 1302.68503490379 78.452 3 -0.944407201059609 0.28422348355330646 1.0 ['ZNF264|p.E487Rfs*21|1|0.32|ENSG00000083844|chr19:57212551-57212552|-/CGTA|frameshift_variant', 'ENSG00000083844|ENST00000263095|ZNF264'] 62910 22586 LMVMRRLL True PC9_epitope_Rep4 1030.6143624012598 1030.6132699358602 95.111 2 -0.944478495241763 0.28422348355330646 1.0 ['ENST00000430945.5_1_9:94907296-94910408:+|nuORF'] 68734 19305 LVDHAYETYF True PC9_epitope_Rep2 1256.5713537752802 1256.5702499358601 79.631 2 -0.9444903866206422 0.28422348355330646 1.0 ['ENSG00000173208|ENST00000308666|ABCD2'] 49063 19377 KFRAHRVVKR True NCI_RA007_Epitope_Rep4 1295.8050911646299 1295.8034549037902 83.799 3 -0.9445011172743856 0.28422348355330646 1.0 ['ENST00000442009.6_1_9:37489340-37503196:+|nuORF', 'ENSG00000137054|ENST00000377798|POLR1E', 'nc|ENSG00000137054|Q9GZS1-1|POLR1E'] 121653 18173 VGLGTGLAAP True PC9_epitope_Rep3 854.48616759934 854.48506993586 75.106 2 -0.9445061824106751 0.28422348355330646 1.0 ['ENST00000492581.5_1_22:21067427-21075805:-|nuORF', 'ENST00000486209.5_1_22:21832732-21838406:-|nuORF'] 11334 5183 DEYKEIFYRRN True PC9_epitope_Rep1 1531.7419413410298 1531.74028490379 24.788 3 -0.9445106796097953 0.2842332731549866 1.0 ['ENSG00000115339|ENST00000392701|GALNT3'] 23275 18573 EVRRAVLSCI True PC9_epitope_Rep6 1144.6386625727998 1144.63756993586 84.082 2 -0.9445596602765196 0.2842430624888877 1.0 ['ENSG00000109805|ENST00000251496|NCAPG'] 98733 12665 SIRRWAYQMFR True H1975_Epitope_Rep3 1512.7772217342797 1512.7761299358601 53.926 2 -0.9445819701131303 0.28425285155502067 1.0 ['ACACB|p.E285Q|1|0.24|ENSG00000076555|chr12:109167962-109167962|G/C|missense_variant'] 11010 192 DDGDDGGTDG True NCI_RA007_Epitope_Rep2 922.2788131535399 922.27770993586 1.0602 2 -0.9446056511864616 0.28427832936735864 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1'] 23399 6095 EVVENNLP True NCI_RA007_Epitope_Rep2 912.4552613938799 912.45416993586 28.314 2 -0.9446147048875251 0.28427832936735864 1.0 ['nc|ENSG00000113916|P41182-2|BCL6', 'ENSG00000113916|ENST00000406870|BCL6'] 68656 13540 LVASEGLFHSH True PC9_epitope_Rep1 1195.59857158263 1195.59746993586 56.938 2 -0.9446151196765454 0.28427832936735864 1.0 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.A2365Gfs*44|3|0.14|ENSG00000163554|chr1:158612859-158612860|-/A|frameshift_variant', 'SPTA1|p.S1181Rfs*59|1|0.24|ENSG00000163554|chr1:158649882-158649882|A/-|frameshift_variant', 'SPTA1|p.R1164Afs*76|1|0.26|ENSG00000163554|chr1:158649935-158649935|G/-|frameshift_variant', 'SPTA1|p.H1183Mfs*57|1|0.25|ENSG00000163554|chr1:158649878-158649878|G/-|frameshift_variant', 'SPTA1|p.D1665Tfs*2|1|0.27|ENSG00000163554|chr1:158638229-158638229|C/-|frameshift_variant', 'SPTA1|p.V1843Sfs*9|2|0.42|ENSG00000163554|chr1:158634582-158634582|A/-|frameshift_variant'] 100271 8096 SLLRLGTLH True NCI_RA007_Epitope_Rep3 1008.6080140675199 1008.60690993586 38.944 2 -0.9446601414693564 0.28427832936735864 1.0 ['ENST00000475975.5_1_22:30758047-30767232:+|nuORF', 'ENSG00000187860|ENST00000338306|CCDC157'] 136716 19342 YIKKYQETLKK True NCI_RA007_Epitope_Rep2 1440.83405082072 1440.83239490379 80.139 3 -0.9446679536529559 0.28428811728184017 1.0 ['ENSG00000166069|ENST00000319669|TMCO5A', 'TMCO5A|p.E189Sfs*19|1|0.26|ENSG00000166069|chr15:37942245-37942246|GA/-|frameshift_variant', 'nc|ENSG00000166069|Q8N6Q1-2|TMCO5A'] 88815 11306 RDSEYEIQR True NCI_RA007_Epitope_Rep5 1194.5629143498998 1194.56180993586 50.134 2 -0.9446790266040092 0.2842979049286144 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC'] 71017 18364 MERRRERRERR True PC9_epitope_Rep1 1628.8866060258 1628.88550993586 75.428 2 -0.9447601711536147 0.28434482947241746 1.0 ['ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-3|SPTBN4'] 128070 22791 VRRLPGGG True PC9_epitope_Rep1 810.4824196315798 810.48132993586 92.476 2 -0.9447675096086968 0.28434482947241746 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 135961 7731 YFCPFLAY True H1975_Epitope_Rep3 1022.4571759701798 1022.45606993586 34.72 2 -0.9447857971513348 0.28435072749152174 1.0 ['ENST00000373670.5_1_9:125659820-125659901:-|nuORF'] 36602 13499 GVLKKVIRHKR True H1975_Epitope_Rep2 1332.8830071321597 1332.88135490379 57.057 3 -0.9448104054049306 0.28435072749152174 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 19246 12442 ELLESSRTLP True H1975_Epitope_Rep2 1143.61355294043 1143.61244993586 52.946 2 -0.9448574212175133 0.28435662518802135 1.0 ['nc|ENSG00000134324|Q14693-6|LPIN1', 'LPIN1|p.R605Lfs*24|1|0.13|ENSG00000134324|chr2:11802939-11802945|AGCGCGC/-|frameshift_variant', 'LPIN1|p.G744Afs*11|1|0.25|ENSG00000134324|chr2:11815174-11815174|G/-|frameshift_variant', 'nc|ENSG00000134324|Q14693|LPIN1', 'nc|ENSG00000134324|Q14693-2|LPIN1', 'nc|ENSG00000134324|Q14693-4|LPIN1', 'ENSG00000134324|ENST00000674199|LPIN1', 'nc|ENSG00000134324|Q14693-5|LPIN1', 'nc|ENSG00000134324|Q14693-7|LPIN1'] 132232 9183 VYKRLHKP True NCI_RA007_Epitope_Rep5 1039.6290838652696 1039.6279899358601 41.973 2 -0.9448619812392092 0.28435662518802135 1.0 ['ENSG00000109929|ENST00000264027|SC5D'] 83679 8429 QEALGVASWKR True NCI_RA007_Epitope_Rep2 1243.66731984879 1243.6662299358602 37.429 2 -0.9448729834409091 0.2843664109611519 1.0 ['ENST00000260599.10_3_2:27309825-27310158:+|nuORF'] 79572 15520 PGTGYTGL True PC9_epitope_Rep6 764.37046914076 764.36936993586 71.874 2 -0.9449879407855898 0.2844172181808237 1.0 ['ENSG00000029559|ENST00000226284|IBSP'] 128081 24668 VRRLRAALRP True H1975_Epitope_Rep1 1206.7785420636196 1206.77689490379 102.2 3 -0.9450568876130775 0.28445435029330124 1.0 ['ENST00000221665.4_1_19:56104161-56104986:-|nuORF'] 29663 12070 FVMVAKTVPD True H1975_Epitope_Rep3 1105.58416738845 1105.58306993586 51.59 2 -0.9450939024391317 0.2844641343287664 1.0 ['nc|ENSG00000111859|Q14511-3|NEDD9', 'ENSG00000111859|ENST00000379446|NEDD9'] 123805 8915 VITLSKETL True PC9_epitope_Rep1 1002.59611197114 1002.59500993586 39.133 2 -0.9452047947296458 0.28451493812811923 1.0 ['ENSG00000112365|ENST00000230122|ZBTB24'] 134150 11159 WRGRWRRRWGW True H1975_Epitope_Rep1 1656.8762990422797 1656.87520993586 47.892 2 -0.9452272039429217 0.2845150529107763 1.0 ['ENST00000216410.7_1_14:53258232-53258316:-|nuORF'] 18738 18751 ELDLRGYKIP True PC9_epitope_Rep3 1202.66592286646 1202.66482993586 77.347 2 -0.9452306049533438 0.2845150529107763 1.0 ['ENST00000395613.2_1_22:51193627-51193861:-|nuORF', 'ENST00000558020.1_1_15:101828356-101835383:-|nuORF', 'ENST00000560856.5_1_15:101827905-101835383:-|nuORF', 'ENST00000558036.5_1_15:101827046-101835383:-|nuORF', 'ENSG00000131876|ENST00000254193|SNRPA1'] 41591 10842 IDETRQIL True PC9_epitope_Rep2 986.53965972418 986.53856993586 47.022 2 -0.9452411622926213 0.2845150529107763 1.0 ['ENSG00000123360|ENST00000243052|PDE1B', 'nc|ENSG00000123360|Q01064-2|PDE1B'] 134085 9121 WQRKDSVVFLS True NCI_RA007_Epitope_Rep4 1363.72483472491 1363.72318490379 41.925 3 -0.9452446336302159 0.2845150529107763 1.0 ['ENST00000473975.5_1_2:149987462-150017984:+|nuORF', 'ENST00000498249.1_1_2:150000375-150061310:+|nuORF'] 111446 12587 TLKTRVLPN True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 53.441 2 -0.9452654722562128 0.2845150529107763 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2'] 129757 5063 VTKKVKIRK True PC9_epitope_Rep5 1098.76009803482 1098.7590099358601 24.501 2 -0.9452692103067313 0.2845150529107763 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 32360 1747 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 9.231 2 -0.9452911729684597 0.2845150529107763 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 10389 22087 CKYQIEVLTS True NCI_RA007_Epitope_Rep5 1182.5954603481398 1182.59380490379 92.086 3 -0.945311771662879 0.2845209449852346 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 136042 17943 YFSAECPDP True H1975_Epitope_Rep2 1027.3956979124298 1027.39517496793 74.339 1 -0.9453145609798929 0.2845209449852346 1.0 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 111190 9840 TLFLITWTMQP True H1975_Epitope_Rep3 1349.70534515029 1349.7042499358602 42.878 2 -0.9453316039305264 0.284530726638868 1.0 ['ENSG00000016490|ENST00000394711|CLCA1'] 82417 7624 PVARPQAMA True PC9_epitope_Rep1 939.4960210903898 939.49492993586 34.147 2 -0.9453469458420478 0.2845405080250458 1.0 ['ENST00000475589.1_1_15:43886371-43886566:+|nuORF', 'ENST00000481666.1_1_15:43886371-43886950:+|nuORF'] 34750 11635 GQQVDYSIIA True PC9_epitope_Rep3 1092.54513902744 1092.5440499358601 49.77 2 -0.9453759944193333 0.28454639908131457 1.0 ['nc|ENSG00000116833|O00482-4|NR5A2', 'nc|ENSG00000116833|O00482-2|NR5A2', 'ENSG00000116833|ENST00000367362|NR5A2', 'NUP85-NR5A2|1|fusion', 'nc|ENSG00000116833|O00482-3|NR5A2'] 8449 7040 ATSPGEPGL True NCI_RA007_Epitope_Rep3 827.40249754503 827.40140993586 34.809 2 -0.9453866017171815 0.28454639908131457 1.0 ['nc|ENSG00000143554|Q5K4L6-2|SLC27A3', 'ENSG00000143554|ENST00000624995|SLC27A3'] 138079 9880 YQEFLWRMQR True NCI_RA007_Epitope_Rep2 1455.7081391149497 1455.7070499358601 43.057 2 -0.9454286161826675 0.2845522898154477 1.0 ['ENSG00000242950|ENST00000603053|ERVW-1'] 85797 9988 QLWTVYCEQS True PC9_epitope_Rep1 1255.5543238121497 1255.5532299358601 43.283 2 -0.945433681547617 0.2845522898154477 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 101137 11388 SLVLPSGP True H1975_Epitope_Rep1 768.43815477776 768.43760496793 48.783 1 -0.9454480160930158 0.2845581802274716 1.0 ['ENST00000247668.6_1_9:139820478-139821042:+|nuORF'] 58991 13611 LGAGIRLV True PC9_epitope_Rep5 797.5123227775299 797.51122993586 57.377 2 -0.9454505522666927 0.2845581802274716 1.0 ['nc|nan|Q2M2W7-2|C17orf58', 'ENSG00000186665|ENST00000580729|C17orf58'] 91173 9831 RLPTPEQI True PC9_epitope_Rep2 952.5341804209199 952.53308993586 43.151 2 -0.9454958132675471 0.2845777401099051 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 120409 12073 VFSSKGTL True NCI_RA007_Epitope_Rep5 837.4596184983299 837.45852993586 53.095 2 -0.9455073007673548 0.2845777401099051 1.0 ['GALNT8|p.L24F|1|0.26|ENSG00000130035|chr12:4720747-4720747|C/T|missense_variant', 'ENSG00000130035|ENST00000252318|GALNT8'] 122649 6648 VGTPHQDVP True NCI_RA007_Epitope_Rep5 948.46649478392 948.46538993586 32.242 2 -0.9455469075246339 0.2845836295040735 1.0 ['ENSG00000125872|ENST00000378858|LRRN4'] 110298 6026 TIHERISEK True H1975_Epitope_Rep3 1111.5985715826298 1111.59746993586 28.194 2 -0.9455507436461514 0.2845836295040735 1.0 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 5616 3250 APAATFKSP True NCI_RA007_Epitope_Rep5 888.4705175352 888.46942993586 17.953 2 -0.9455968219704166 0.28461296627892674 1.0 ['ENST00000381962.3_1_20:629097-629349:-|nuORF'] 65564 5762 LSGFQHLQQ True NCI_RA007_Epitope_Rep4 1056.53524305008 1056.5341499358601 28.784 2 -0.9456321662729864 0.28461296627892674 1.0 ['ENST00000199814.8_1_5:150078125-150080602:-|nuORF'] 14605 15306 DVILVESQDPP True PC9_epitope_Rep5 1210.60813320682 1210.60702993586 63.884 2 -0.9456413543644742 0.28461296627892674 1.0 ['ENSG00000174460|ENST00000310164|ZCCHC12'] 136600 23767 YHYRLDWLMWF True NCI_RA007_Epitope_Rep2 1628.7598403346399 1628.7587499358601 99.762 2 -0.9457083423075544 0.28461506922330493 1.0 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 24929 2224 FDDGDCCD True NCI_RA007_Epitope_Rep2 888.226583982 888.22548993586 12.165 2 -0.9457614109460072 0.28461506922330493 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 87561 7803 QTLTNLVSA True PC9_epitope_Rep2 945.51311062317 945.51200993586 35.384 2 -0.9457654372316969 0.28461506922330493 1.0 ['ENST00000454309.6_1_3:192126033-192126612:-|nuORF'] 108053 8551 TDGIMEHITK True H1975_Epitope_Rep3 1143.55940919259 1143.55830993586 37.88 2 -0.9457775757109477 0.28461506922330493 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant'] 467 12457 AAMLDTVVFK True NCI_RA007_Epitope_Rep4 1093.58416738845 1093.58306993586 54.924 2 -0.9457794709986478 0.28461506922330493 1.0 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 36113 7006 GVELRQQQLED True H1975_Epitope_Rep1 1313.6575430107298 1313.65644993586 31.983 2 -0.945785763152055 0.28461506922330493 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 48199 18964 KAYIIEQSP True PC9_epitope_Rep1 1047.5600608155898 1047.5589699358602 77.728 2 -0.9457947840665514 0.28461506922330493 1.0 ['ENSG00000203910|ENST00000370375|C1orf146'] 17075 12985 EGQKTSAASCP True H1975_Epitope_Rep3 1077.4760734914498 1077.4749699358601 55.181 2 -0.9458014485973804 0.28461506922330493 1.0 ['GPC1|p.P538Rfs*15|1|0.17|ENSG00000063660|chr2:240466222-240466222|C/-|frameshift_variant', 'ENSG00000063660|ENST00000264039|GPC1', 'ENST00000469694.5_1_2:241404001-241405704:+|nuORF'] 126325 4789 VPKGYEQYY True H1975_Epitope_Rep1 1145.53932537101 1145.53768490379 23.484 3 -0.9458052950194737 0.28461506922330493 1.0 ['OSBPL3|p.M775V|1|0.33|ENSG00000070882|chr7:24806897-24806897|T/C|missense_variant'] 93866 19860 RVFVRNREKRR True NCI_RA007_Epitope_Rep3 1514.9018450837796 1514.90020490379 86.559 3 -0.9458061257542801 0.28461506922330493 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN'] 53512 24274 KVLVKARRKLI True NCI_RA007_Epitope_Rep1 1322.9238093149797 1322.92216490379 100.55 3 -0.9458543829253416 0.2846346230063823 1.0 ['ENST00000437151.1_1_6:87680204-87680483:+|nuORF'] 73151 10837 [Acetylation]-NEDKVGVAVGE True H1975_Epitope_Rep1 1157.5564323034298 1157.55532993586 46.646 2 -0.9458733931588511 0.2846346230063823 1.0 ['ENST00000503555.5_1_4:41145057-41179590:-|nuORF'] 131667 16639 VWKYFVQLC True PC9_epitope_Rep2 1184.6052371862 1184.60412993586 69.247 2 -0.9459262584943141 0.2846580659268573 1.0 ['ENSG00000119408|ENST00000320246|NEK6', 'nc|ENSG00000119408|Q9HC98-3|NEK6', 'nc|ENSG00000119408|Q9HC98-4|NEK6', 'nc|ENSG00000119408|Q9HC98-2|NEK6', 'NEK7|p.V174Gfs*37|1|0.15|ENSG00000151414|chr1:198278988-198278989|-/G|frameshift_variant', 'ENSG00000151414|ENST00000367385|NEK7'] 52521 4803 KPPPPPPPP True PC9_epitope_Rep2 922.5276384884999 922.52654993586 23.845 2 -0.9459650826361421 0.2846678419635658 1.0 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF', 'ENST00000534677.1_1_11:57472348-57479651:-|nuORF', 'nc|ENSG00000156603|A0JLT2-2|MED19', 'ENSG00000156603|ENST00000431606|MED19', 'nc|ENSG00000156603|A0JLT2|MED19'] 86074 5342 QPNPNLNV True NCI_RA007_Epitope_Rep3 894.45593010022 894.45482993586 28.021 2 -0.9460732478611384 0.28470494984557354 1.0 ['ENST00000452556.5_1_2:214162070-215102915:+|nuORF', 'nc|ENSG00000144451|Q8N0X2-2|SPAG16', 'ENSG00000144451|ENST00000331683|SPAG16'] 4 5612 AAAAAAAAAAA True PC9_epitope_Rep2 799.41881631551 799.41770993586 26.972 2 -0.9461438417452964 0.2847654968842243 1.0 ['ENSG00000196504|ENST00000545856|PRPF40A', 'nc|ENSG00000196504|O75400|PRPF40A', 'nc|ENSG00000196504|O75400-2|PRPF40A', 'nc|ENSG00000196504|O75400-3|PRPF40A', 'ENSG00000170113|ENST00000337435|NIPA1', 'ENSG00000109132|ENST00000226382|PHOX2B', 'ENSG00000125285|ENST00000376945|SOX21', 'ENST00000488347.5_1_X:101149758-101186981:-|nuORF', 'ENST00000494101.1_1_16:30680055-30680963:+|nuORF', 'nc|ENSG00000291307|A0A3B3IS91|POLGARF', 'ENSG00000188620|ENST00000357878|HMX3', 'ENST00000393033.8_1_19:14603694-14606929:-|nuORF', 'nc|ENSG00000273274|Q8NAP8-2|ZBTB8B', 'nc|ENSG00000163508|O95936|EOMES', 'nc|ENSG00000164651|Q8IXZ3-1|SP8', 'nc|ENSG00000164651|Q8IXZ3-2|SP8', 'ENSG00000273274|ENST00000609129|ZBTB8B', 'ENSG00000217236|ENST00000394967|SP9', 'ENSG00000177565|ENST00000457928|TBL1XR1', 'ENSG00000112183|ENST00000379052|RBM24', 'ENST00000415365.5_2_7:16685784-16705069:+|nuORF', 'ENST00000562594.2_1_16:29820010-29823326:+|nuORF', 'ENST00000471760.5_2_7:7680434-7728976:+|nuORF', 'ENST00000400445.7_1_13:35516555-35516726:+|nuORF', 'ENST00000568282.1_1_16:29820960-29821549:+|nuORF', 'ENSG00000139352|ENST00000266744|ASCL1', 'ENST00000290271.6_1_8:23712148-23712316:-|nuORF', 'ENST00000258761.7_2_7:16685784-16705073:+|nuORF', 'ENST00000512215.5_1_4:102268426-102268543:-|nuORF', 'ENST00000591349.5_1_19:14602519-14606929:-|nuORF', 'ENST00000426595.1_1_7:55955092-55973961:+|nuORF', 'ENST00000458570.5_1_X:101149758-101187002:-|nuORF', 'nc|ENSG00000103495|P56270-4|MAZ', 'ENST00000569039.5_1_16:29820362-29831508:-|nuORF', 'ENSG00000164107|ENST00000359562|HAND2', 'nc|ENSG00000112183|Q9BX46-2|RBM24', 'nc|ENSG00000112183|Q9BX46-5|RBM24', 'ENST00000510826.1_1_6:17290237-17292347:+|nuORF', 'ENST00000303210.8_1_7:100271283-100273893:+|nuORF', 'ENST00000371953.7_1_10:89623706-89624018:+|nuORF', 'ENST00000398832.2_1_17:30469273-30469582:-|nuORF', 'ENSG00000187416|ENST00000424859|LHFPL3', 'MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ', 'ENSG00000087095|ENST00000407008|NLK', 'ENSG00000206432|ENST00000383490|TMEM200C', 'ENSG00000130711|ENST00000253008|PRDM12', 'ENSG00000152784|ENST00000415738|PRDM8', 'ENSG00000185668|ENST00000373012|POU3F1', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'ENSG00000176399|ENST00000325870|DMRTA1', 'nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A', 'ENSG00000170396|ENST00000302277|ZNF804A', 'ENSG00000135414|ENST00000257868|GDF11', 'ENSG00000180592|ENST00000449193|SKIDA1', 'nc|ENSG00000180592|Q1XH10-2|SKIDA1', 'ZMIZ1|p.V288A|1|0.42|ENSG00000108175|chr10:79292262-79292262|T/C|missense_variant', 'nc|ENSG00000154118|Q8WXH2-2|JPH3', 'ENSG00000004848|ENST00000379044|ARX', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000143970|Q76L83-2|ASXL2', 'ENSG00000143970|ENST00000435504|ASXL2', 'ENSG00000205927|ENST00000382357|OLIG2', 'ENSG00000081913|ENST00000262719|PHLPP1', 'ENSG00000163508|ENST00000449599|EOMES', 'ENSG00000267909|ENST00000599174|CCDC177', 'nc|ENSG00000171862|P60484-2|PTEN', 'ENSG00000163623|ENST00000295886|NKX6-1', 'nc|ENSG00000169891|Q8NFH8-4|REPS2', 'ENSG00000169891|ENST00000357277|REPS2', 'ENSG00000198816|ENST00000597229|ZNF358', 'nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2', 'ENSG00000113318|ENST00000265081|MSH3', 'ENSG00000125816|ENST00000351817|NKX2-4', 'ENSG00000121068|ENST00000240328|TBX2', 'nc|ENSG00000178177|Q8N3X6|LCORL', 'ENSG00000163013|ENST00000520530|FBXO41', 'nc|ENSG00000178177|Q8N3X6-3|LCORL', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000204612|ENST00000376708|FOXB2', 'ENSG00000223731|ENST00000686983|SUPT20HL1', 'ENST00000543067.5_1_X:21392559-21392961:+|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4', 'ENSG00000134595|ENST00000370536|SOX3', 'ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'ENSG00000178177|ENST00000635767|LCORL', 'ENSG00000133243|ENST00000255608|BTBD2', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000156860|Q9HAH7|FBRS', 'nc|ENSG00000156860|Q9HAH7-1|FBRS', 'ENSG00000119669|ENST00000238647|IRF2BPL', 'IRF2BPL|p.G195Afs*17|1|0.17|ENSG00000119669|chr14:77027209-77027209|C/-|frameshift_variant', 'ENSG00000123095|ENST00000242728|BHLHE41', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1', 'ENSG00000106031|ENST00000649031|HOXA13', 'ENSG00000119919|ENST00000344586|NKX2-3', 'nc|ENSG00000124813|Q13950-3|RUNX2', 'nc|ENSG00000124813|Q13950-2|RUNX2', 'ENSG00000124813|ENST00000647337|RUNX2', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'ENST00000510871.5_1_4:40427923-40438677:-|nuORF', 'nc|ENSG00000163694|A0AV96-2|RBM47', 'ENSG00000163694|ENST00000295971|RBM47', 'ENSG00000166432|ENST00000651725|ZMAT1', 'ENSG00000167971|ENST00000343516|CASKIN1', 'ENSG00000178919|ENST00000375123|FOXE1', 'ENSG00000183770|ENST00000648323|FOXL2', 'ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'ENSG00000187140|ENST00000371116|FOXD3', 'ENSG00000249992|ENST00000503771|TMEM158', 'ENST00000379613.7_1_6:10398366-10398585:-|nuORF', 'ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'nc|ENSG00000183955|Q9NQR1|KMT5A'] 24498 18010 FAIPPSFASI True PC9_epitope_Rep5 1048.5593325396 1048.55822993586 74.292 2 -0.9461577329384974 0.2847654968842243 1.0 ['nc|ENSG00000211899|P01871-1|IGHM', 'nc|ENSG00000211899|P01871|IGHM'] 86336 22546 QQITGHGG True H1975_Epitope_Rep1 796.38276515996 796.38166993586 93.777 2 -0.9462855491537617 0.28478893641444714 1.0 ['nc|ENSG00000184752|Q9UI09-2|NDUFA12', 'ENSG00000184752|ENST00000327772|NDUFA12'] 78798 22334 PELRMLRNI True PC9_epitope_Rep4 1140.64374795324 1140.64317496793 94.145 1 -0.9463038757110511 0.28479092648264553 1.0 ['ENST00000490457.5_1_3:40567331-40615968:+|nuORF'] 70959 12632 MENLQQDYELK True NCI_RA007_Epitope_Rep4 1409.64968074897 1409.6485899358602 55.62 2 -0.94631275164297 0.28479092648264553 1.0 ['ENSG00000103494|ENST00000647211|RPGRIP1L', 'nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 86385 18515 QQLNNQREWG True PC9_epitope_Rep2 1271.60069684095 1271.5995899358602 76.562 2 -0.9463281578572105 0.28479092648264553 1.0 ['nc|ENSG00000126804|Q9Y2K1-2|ZBTB1', 'ENSG00000126804|ENST00000683701|ZBTB1'] 98601 18898 SINPVTLRRW True PC9_epitope_Rep2 1240.7040397106798 1240.70294993586 78.055 2 -0.9463539211837897 0.2847968079582411 1.0 ['ENSG00000160191|ENST00000291539|PDE9A', 'nc|ENSG00000160191|O76083-12|PDE9A', 'nc|ENSG00000160191|O76083-15|PDE9A', 'nc|ENSG00000160191|O76083-14|PDE9A', 'nc|ENSG00000160191|O76083-5|PDE9A', 'nc|ENSG00000160191|O76083-2|PDE9A', 'nc|ENSG00000160191|O76083-13|PDE9A', 'nc|ENSG00000160191|O76083-8|PDE9A', 'nc|ENSG00000160191|O76083-6|PDE9A', 'nc|ENSG00000160191|O76083-16|PDE9A', 'nc|ENSG00000160191|O76083-10|PDE9A', 'ENST00000470987.5_1_21:44117526-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-3|PDE9A', 'nc|ENSG00000160191|O76083-4|PDE9A', 'nc|ENSG00000160191|O76083-11|PDE9A', 'nc|ENSG00000160191|O76083-9|PDE9A', 'ENST00000489319.5_1_21:44178904-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-7|PDE9A'] 33490 8952 GLGSQEALPPP True H1975_Epitope_Rep1 1064.5502244078798 1064.54912993586 39.339 2 -0.9463603897823593 0.2847968079582411 1.0 ['nc|ENSG00000118094|O43280-2|TREH', 'ENSG00000118094|ENST00000264029|TREH'] 75 8732 AAAITGDSAEA True NCI_RA007_Epitope_Rep3 975.45090428943 975.44980993586 41.438 2 -0.9463728224476997 0.284806580763292 1.0 ['nc|ENSG00000278259|Q96H55-4|MYO19', 'ENSG00000278259|ENST00000614623|MYO19'] 32801 22134 GIEMKFKNMLF True PC9_epitope_Rep5 1356.6934005675996 1356.69230993586 90.173 2 -0.9464426234483183 0.28481246156999385 1.0 ['ENSG00000158125|ENST00000379416|XDH'] 129233 7406 VTDMFTDQEK True NCI_RA007_Epitope_Rep5 1212.5332540143997 1212.53161490379 35.165 3 -0.9464524070055302 0.28481246156999385 1.0 ['nc|ENSG00000137500|Q9GZT6-2|CCDC90B', 'ENSG00000137500|ENST00000529689|CCDC90B', 'ENST00000526265.5_1_11:82984683-82985032:-|nuORF', 'ENST00000533761.5_2_11:82978071-82985032:-|nuORF', 'ENST00000514414.1_1_4:74951714-74951975:-|nuORF', 'ENST00000260054.8_1_11:82972955-82984922:-|nuORF', 'nc|ENSG00000137500|Q9GZT6-3|CCDC90B'] 87499 24396 QTGQPRRGAP True H1975_Epitope_Rep3 1066.5631891334199 1066.56208993586 101.57 2 -0.946490397595097 0.2848320056840696 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|91|3|anti-sense'] 121719 10286 VGLRDGVL True PC9_epitope_Rep4 827.4865019525099 827.48540993586 47.25 2 -0.9465370588655203 0.2848320056840696 1.0 ['nc|ENSG00000082684|Q9P283-2|SEMA5B', 'nc|ENSG00000082684|Q9P283-3|SEMA5B', 'ENSG00000082684|ENST00000357599|SEMA5B', 'nc|ENSG00000082684|Q9P283-4|SEMA5B'] 3119 17606 AGCWWGVM True NCI_RA007_Epitope_Rep5 908.3673154199599 908.36620993586 74.502 2 -0.9465545158151513 0.28485544078264197 1.0 ['ENSG00000144843|ENST00000357003|ADPRH', 'ENST00000471850.1_1_3:119298364-119306722:+|nuORF'] 93179 20674 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 85.629 2 -0.9465882278405373 0.28486131985243884 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 45197 23767 IRIILLYIFLK True H1975_Epitope_Rep2 1403.9268290067496 1403.92519490379 97.925 3 -0.9465953277138744 0.28486131985243884 1.0 ['ENSG00000136854|ENST00000373299|STXBP1', 'nc|ENSG00000136854|P61764-2|STXBP1'] 106618 13285 SWMPMFQRRRR True H1975_Epitope_Rep1 1549.7870752253298 1549.78596993586 56.202 2 -0.9466074326777383 0.2848710907078739 1.0 ['ENSG00000105697|ENST00000222304|HAMP'] 104377 7974 SSGERWIRY True H1975_Epitope_Rep3 1152.5676058075198 1152.56650993586 35.644 2 -0.9466520916959451 0.28490818668706963 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 29683 12605 FVNLKTVL True NCI_RA007_Epitope_Rep3 932.5695033004799 932.56840993586 56.827 2 -0.9467252781840699 0.28494528165261707 1.0 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B'] 130160 18314 VTRRLGAG True NCI_RA007_Epitope_Rep5 828.4929843152798 828.49188993586 77.245 2 -0.9468226153103035 0.28497267759562844 1.0 ['ENST00000491126.6_1_2:165561593-165698829:-|nuORF', 'ENST00000402676.6_1_6:151561150-151561765:+|nuORF', 'ENST00000434366.5_1_2:165561593-165697754:-|nuORF', 'ENST00000483743.5_1_2:165600108-165698476:-|nuORF', 'ENST00000496396.1_1_2:165600108-165698346:-|nuORF', 'nc|ENSG00000082438|Q53SF7-2|COBLL1'] 71787 1644 MNMKKSHEVQA True NCI_RA007_Epitope_Rep1 1301.62202653249 1301.62039490379 8.695 3 -0.9468580989774975 0.28497267759562844 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'ENSG00000127720|ENST00000248306|METTL25'] 36450 13554 GVIPYFPYSK True NCI_RA007_Epitope_Rep4 1169.6120963884498 1169.61098993586 59.341 2 -0.9468607504142778 0.28497267759562844 1.0 ['nc|ENSG00000161542|Q14558|PRPSAP1', 'ENSG00000161542|ENST00000446526|PRPSAP1', 'nc|ENSG00000141127|O60256-4|PRPSAP2', 'nc|ENSG00000141127|O60256-3|PRPSAP2', 'nc|ENSG00000141127|O60256-2|PRPSAP2', 'ENSG00000141127|ENST00000268835|PRPSAP2'] 13371 9218 DNEDKISIKKV True H1975_Epitope_Rep1 1287.7034305739899 1287.70177490379 40.366 3 -0.9468821366397612 0.28497267759562844 1.0 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 45497 11329 ISEQWTQKHFQ True NCI_RA007_Epitope_Rep1 1430.69426287262 1430.6931699358602 48.038 2 -0.9468895227459588 0.28497267759562844 1.0 ['ENST00000260356.5_1_15:39887667-39888120:+|nuORF'] 42920 9955 IFWKEPPLP True PC9_epitope_Rep4 1125.62226714933 1125.62062490379 45.946 3 -0.9468950093491609 0.28497267759562844 1.0 ['KCNH5|p.T621Pfs*13|1|0.17|ENSG00000140015|chr14:62779886-62779886|T/-|frameshift_variant'] 122138 17207 VGRHQRGR True NCI_RA007_Epitope_Rep4 964.5427284723598 964.54217496793 74.499 1 -0.9468998206183439 0.28497267759562844 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 131449 20948 VVTSVKTRVS True PC9_epitope_Rep6 1074.6397081186199 1074.6386099358601 93.362 2 -0.9469792349259807 0.2849824455950055 1.0 ['ENST00000409714.7_1_2:170460711-170470975:+|nuORF'] 70646 11360 MCIMCRFVT True PC9_epitope_Rep2 1102.4795853742198 1102.4784899358601 49.019 2 -0.9470038837423337 0.2849825155720686 1.0 ['chr5:90822097-90965415|264|32.48|0.18|7.5|+|2|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|2'] 131339 22917 VVRRKLGDLRK True PC9_epitope_Rep6 1338.85718630714 1338.85555490379 101.26 3 -0.9470094600506396 0.2849825155720686 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 93189 21680 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 89.689 2 -0.9470127323529428 0.2849825155720686 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 66847 19182 LSWARKTI True PC9_epitope_Rep5 973.57090028281 973.56980993586 78.82 2 -0.9470261304374731 0.2849825155720686 1.0 ['ENST00000381297.9_1_X:1582972-1583200:-|nuORF'] 68632 8870 LVAFSLRVEA True NCI_RA007_Epitope_Rep4 1103.6338944621898 1103.63278993586 40.942 2 -0.9470334013923015 0.2849825155720686 1.0 ['ENSG00000182853|ENST00000328739|VMO1'] 118968 7866 VEEYVYEFRDK True NCI_RA007_Epitope_Rep1 1475.6932598131095 1475.6921699358602 34.589 2 -0.9470401744254437 0.2849825155720686 1.0 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 126635 17476 VPQESLHAL True PC9_epitope_Rep3 992.5290950404798 992.52798993586 72.4 2 -0.9470976109233552 0.2849825155720686 1.0 ['ENST00000569462.5_1_15:75074984-75090589:+|nuORF'] 83158 7941 PYSIMRSV True PC9_epitope_Rep5 951.48478770035 951.48368993586 35.484 2 -0.9471286441413964 0.284992282369654 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 91015 21222 RLKKTWSKVK True H1975_Epitope_Rep2 1272.8030254759599 1272.80137490379 87.831 3 -0.9471741068573638 0.2850157082365797 1.0 ['ENSG00000198915|ENST00000395810|RASGEF1A', 'nc|ENSG00000198915|Q8N9B8-2|RASGEF1A'] 11262 4621 DERDKKKRT True H1975_Epitope_Rep3 1174.6418333769398 1174.64017490379 22.897 3 -0.9472180856484994 0.2850391334635506 1.0 ['nc|ENSG00000261239|Q6NSI1|ANKRD26P1'] 107724 18495 TALLLLKE True PC9_epitope_Rep1 899.56916894731 899.56806993586 75.933 2 -0.9473198269172514 0.2850762170136043 1.0 ['ENSG00000107651|ENST00000369075|SEC23IP'] 128063 18687 VRRLPGGG True NCI_RA007_Epitope_Rep2 810.4824196315798 810.48132993586 77.487 2 -0.9473243648910246 0.28508208812522196 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 10900 11662 DASEINSEQD True H1975_Epitope_Rep3 1106.4363764241 1106.43526993586 49.993 2 -0.9473281736265388 0.28508208812522196 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 37386 10577 GVYHGTQVP True PC9_epitope_Rep2 956.4715801643598 956.47048993586 46.002 2 -0.9473707890938322 0.2850879589160839 1.0 ['nc|ENSG00000121904|Q7Z408|CSMD2', 'ENSG00000121904|ENST00000373381|CSMD2'] 64057 4920 LQDPVPKE True NCI_RA007_Epitope_Rep1 924.4916469026 924.49054993586 23.218 2 -0.9473791141700286 0.2850879589160839 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 81665 1091 PRSSSLWIELC True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 6.2019 3 -0.94743613610783 0.2850938293862165 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 58341 13995 LETVYRALP True H1975_Epitope_Rep2 1060.59169529704 1060.5905899358602 58.981 2 -0.9474835386066363 0.2850938293862165 1.0 ['FREM1|p.D1503Y|1|0.23|ENSG00000164946|chr9:14776139-14776139|C/A|missense_variant'] 581 8181 AARLPPQDFLD True PC9_epitope_Rep5 1241.6404363946099 1241.63878490379 36.408 3 -0.9475002041811575 0.2851094631321615 1.0 ['ENSG00000136026|ENST00000378026|CKAP4'] 136160 10343 YGHSCLIP True PC9_epitope_Rep3 888.4163737873599 888.41526993586 44.728 2 -0.9475016931786564 0.2851094631321615 1.0 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000576129.5_1_17:1936818-1940251:+|nuORF'] 67326 7184 LTDQMTFGER True NCI_RA007_Epitope_Rep5 1196.54957278488 1196.54846993586 34.312 2 -0.9475169677885157 0.2851094631321615 1.0 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'chr4:69599394-69638899|138|17.34|0.08|7.68|-|ENST00000514019|UGT2A2,UGT2A2', 'nc|ENSG00000271271|P0DTE5-2|UGT2A2', 'chr4:69595249-69599246|192|39.89|0.81|5.62|-|ENST00000604021|UGT2A2,UGT2A2', 'ENSG00000271271|ENST00000604629|UGT2A2'] 80803 17455 PLSTLPRMAP True PC9_epitope_Rep2 1081.5954007784899 1081.59430993586 72.392 2 -0.947577600957875 0.28513288355958594 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'ENST00000475684.2_1_6:31124506-31125946:-|nuORF'] 119857 5964 VEVSGDPELQP True NCI_RA007_Epitope_Rep2 1168.5611830143998 1168.56008993586 27.809 2 -0.9476105536736869 0.28516996025838875 1.0 ['chr7:97966977-97969770|493|37.08|0.0|21.82|-|2|None,CCZ1P1|2'] 18213 12707 EIRNAFDL True PC9_epitope_Rep2 976.4977949121999 976.49668993586 54.183 2 -0.9476621237541972 0.2851992953996149 1.0 ['MPHOSPH8|p.E499Lfs*9|1|0.24|ENSG00000196199|chr13:19650177-19650187|ACGAAACGGAT/-|frameshift_variant', 'MPHOSPH8|p.P750Qfs*58|1|0.38|ENSG00000196199|chr13:19668445-19668445|T/-|frameshift_variant', 'ENSG00000196199|ENST00000361479|MPHOSPH8', 'nc|ENSG00000196199|Q99549-2|MPHOSPH8'] 5018 4679 ALLEARCHEM True PC9_epitope_Rep5 1171.5477989630701 1171.54615490379 23.051 3 -0.9476689943962167 0.2851992953996149 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 37413 6869 GVYTRVSQYI True PC9_epitope_Rep4 1184.61897267404 1184.61733490379 33.64 3 -0.9477410323265945 0.2851992953996149 1.0 ['nc|ENSG00000057593|P08709|F7', 'ENSG00000057593|ENST00000346342|F7', 'ATP11A-F7|1|fusion'] 115964 8118 TVQAECPMHL True PC9_epitope_Rep2 1127.51035082519 1127.5087049037902 36.583 3 -0.9477791237275888 0.2851992953996149 1.0 ['GABRA2|p.V239*|1|0.24|ENSG00000151834|chr4:46303601-46303601|C/-|frameshift_variant', 'ENSG00000151834|ENST00000381620|GABRA2', 'nc|ENSG00000151834|P47869-2|GABRA2'] 36767 13515 GVPENFNEAKP True NCI_RA007_Epitope_Rep5 1200.5775017848798 1200.57586490379 58.672 3 -0.947787414688747 0.2851992953996149 1.0 ['nc|ENSG00000196277|Q14831-5|GRM7', 'nc|ENSG00000196277|Q14831-3|GRM7', 'nc|ENSG00000196277|Q14831-4|GRM7', 'ENSG00000196277|ENST00000357716|GRM7', 'nc|ENSG00000196277|Q14831-2|GRM7'] 75660 5485 NQSYQESHCF True NCI_RA007_Epitope_Rep4 1241.47713612061 1241.4760299358602 27.683 2 -0.9478069353275278 0.2851992953996149 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 64901 7376 LSAVDAEVSR True PC9_epitope_Rep2 1045.54038800017 1045.53928993586 33.753 2 -0.9478813643482521 0.2851992953996149 1.0 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ABCC4|p.L1261Ffs*59|1|0.26|ENSG00000125257|chr13:95034692-95034693|-/AA|frameshift_variant', 'ENSG00000125257|ENST00000645237|ABCC4', 'nc|ENSG00000125257|O15439-3|ABCC4', 'nc|ENSG00000125257|O15439-4|ABCC4'] 89287 8677 RELHCPDR True H1975_Epitope_Rep1 1024.4872473118398 1024.48614993586 38.305 2 -0.9479093696221454 0.2851992953996149 1.0 ['FAM98C-BLVRB|1|fusion', 'nc|ENSG00000130244|Q17RN3-2|FAM98C', 'ENSG00000130244|ENST00000252530|FAM98C'] 9127 14689 AVLQQHHVKL True PC9_epitope_Rep4 1171.68257599011 1171.6814699358602 64.435 2 -0.9479156122678645 0.2851992953996149 1.0 ['ENSG00000186648|ENST00000342740|CARMIL3'] 44367 8530 INAENEVPILK True H1975_Epitope_Rep1 1238.6870522338597 1238.6859499358602 37.739 2 -0.9479156830048252 0.2851992953996149 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B', 'ENST00000251181.8_1_14:105360511-105361292:+|nuORF'] 65270 10404 LSEHNNAN True PC9_epitope_Rep3 897.39405811965 897.39296993586 44.959 2 -0.9479367273785594 0.2852090559029959 1.0 ['ENSG00000138641|ENST00000402738|HERC3'] 103233 23212 SQRWRLQLRRR True PC9_epitope_Rep4 1553.9127441206497 1553.9116499358602 97.515 2 -0.9479820629816101 0.2852480952510992 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 26574 7375 FKAFFRWLY True PC9_epitope_Rep5 1276.67569970452 1276.67404490379 33.325 3 -0.9479869629561021 0.2852480952510992 1.0 ['ENST00000505842.5_1_4:25404608-25415394:+|nuORF', 'nc|ENSG00000053900|Q9UJX5-2|ANAPC4', 'ENSG00000053900|ENST00000315368|ANAPC4', 'nc|ENSG00000053900|Q9UJX5-3|ANAPC4'] 58596 16501 LFFEFYRL True PC9_epitope_Rep5 1133.59096702105 1133.5898699358602 68.469 2 -0.9479883619211084 0.2852480952510992 1.0 ['ENST00000474887.5_1_2:25458684-25467188:-|nuORF', 'nc|ENSG00000119772|Q9Y6K1-2|DNMT3A', 'ENSG00000119772|ENST00000321117|DNMT3A'] 45583 11154 ISGLQPPALP True NCI_RA007_Epitope_Rep5 991.5702315764698 991.56912993586 49.539 2 -0.9479945002510162 0.2852480952510992 1.0 ['ENST00000528897.1_1_8:11302137-11302787:-|nuORF'] 28135 19012 FRKKKREQ True H1975_Epitope_Rep3 1118.6672602791398 1118.6661699358601 79.724 2 -0.9480669760304805 0.2852812670671764 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 118489 11926 VDSGARGRPRP True H1975_Epitope_Rep3 1166.6268520191397 1166.62574993586 51.027 2 -0.9480711549156987 0.2852812670671764 1.0 ['ENST00000356387.6_1_7:102088095-102088605:+|nuORF'] 5756 13198 APEAPRSPPA True PC9_epitope_Rep3 991.5086939490699 991.50758993586 55.803 2 -0.9481075190915661 0.2852910255184937 1.0 ['ENSG00000155367|ENST00000309276|PPM1J', 'ENST00000464951.1_1_1:113257596-113257911:-|nuORF', 'ENST00000486709.1_1_1:113257111-113257923:-|nuORF'] 15051 4276 EAAGQRHMRAC True H1975_Epitope_Rep2 1228.5553439550001 1228.55424993586 21.562 2 -0.9481537225216681 0.2852968884398509 1.0 ['ENST00000243077.7_1_12:57603875-57604111:+|nuORF'] 8396 9378 ATPVQTSQPD True H1975_Epitope_Rep1 1042.4931034545798 1042.49200993586 40.982 2 -0.9481561414542906 0.2852968884398509 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1'] 86666 19848 QRGQGRGP True PC9_epitope_Rep6 854.4470967520198 854.44598993586 89.005 2 -0.9481600439192859 0.2853066462781934 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 35499 10279 GTGACAGP True H1975_Epitope_Rep3 632.2588105167999 632.25826496793 44.59 1 -0.9481829816965519 0.2853086133220473 1.0 ['ENST00000473160.6_1_19:35622134-35624715:-|nuORF', 'nc|ENSG00000153902|Q8N135-2|LGI4', 'ENSG00000153902|ENST00000310123|LGI4'] 70958 12264 MENLQQDYELK True NCI_RA007_Epitope_Rep3 1409.64968074897 1409.6485899358602 55.394 2 -0.9482021621517132 0.2853086133220473 1.0 ['ENSG00000103494|ENST00000647211|RPGRIP1L', 'nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 111405 16207 TLKFVVVI True H1975_Epitope_Rep2 917.5949897723299 917.59388993586 67.55 2 -0.9482047125020007 0.2853086133220473 1.0 ['ENSG00000173535|ENST00000356864|TNFRSF10C'] 4804 8411 ALELRPAEWEK True H1975_Epitope_Rep1 1340.7088503075995 1340.7077499358602 37.28 2 -0.9483091296413771 0.28535932721712537 1.0 ['ENSG00000135298|ENST00000370598|ADGRB3', 'nc|ENSG00000135298|O60242-2|ADGRB3'] 83822 5672 QEETKTVL True PC9_epitope_Rep6 946.4971262058599 946.49602993586 29.928 2 -0.9483792719095525 0.28538469939387323 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 85892 9543 QNLKKPYP True PC9_epitope_Rep1 986.5549158654999 986.55380993586 41.565 2 -0.9483807307129543 0.28538469939387323 1.0 ['ENSG00000156853|ENST00000287461|ZNF689'] 133322 16380 WERPNFNIK True H1975_Epitope_Rep3 1202.6196413803798 1202.61854993586 68.479 2 -0.9483988915083488 0.28538469939387323 1.0 ['ENSG00000115364|ENST00000393909|MRPL19'] 113553 15170 TQWERPVSI True PC9_epitope_Rep3 1114.5771078620598 1114.5760099358602 63.495 2 -0.9484042226995568 0.28538469939387323 1.0 ['ENST00000509475.5_1_4:40892379-41016395:-|nuORF', 'nc|ENSG00000163697|Q92870-2|APBB2', 'nc|ENSG00000163697|Q92870|APBB2', 'ENSG00000163697|ENST00000508593|APBB2'] 122540 15627 VGSVWFVL True PC9_epitope_Rep3 905.5010893874899 905.49998993586 65.257 2 -0.948430553358439 0.28540421000900973 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10'] 1779 9201 AEHPSLATPP True H1975_Epitope_Rep3 1018.5083595959 1018.50726993586 40.384 2 -0.948440721639571 0.28540421000900973 1.0 ['ENSG00000124203|ENST00000371030|ZNF831', 'ZNF831|p.D1025Gfs*9|1|0.42|ENSG00000124203|chr20:59194084-59194085|-/G|frameshift_variant', 'ZNF831|p.S1319Pfs*7|1|0.08|ENSG00000124203|chr20:59206984-59206985|AG/-|frameshift_variant'] 131313 25694 VVQVIKLA True NCI_RA007_Epitope_Rep5 868.5745886809199 868.57348993586 106.37 2 -0.948480312597716 0.2854100687998253 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 95537 8206 SAQTHFAA True PC9_epitope_Rep2 831.3875161872298 831.38640993586 36.923 2 -0.9485158248753107 0.2854100687998253 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 34917 7023 GQVYTTKHIVR True NCI_RA007_Epitope_Rep5 1300.72516907808 1300.7235149037901 33.693 3 -0.9485605124371937 0.28544322804335365 1.0 ['ZSWIM2|p.P319T|1|0.41|ENSG00000163012|chr2:186829867-186829867|G/T|missense_variant'] 59350 11148 LGKLKPNTP True PC9_epitope_Rep4 966.5862159937799 966.58510993586 50.66 2 -0.9485681397283103 0.28544322804335365 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 103432 7840 SQYRMHSYYP True H1975_Epitope_Rep1 1330.57645623906 1330.57534993586 35.107 2 -0.9487019071601377 0.28550758268608634 1.0 ['ENSG00000137090|ENST00000382276|DMRT1'] 93668 4153 RTHLEEKTI True PC9_epitope_Rep6 1125.61422164677 1125.61258490379 22.899 3 -0.9487879251605977 0.2855173355173355 1.0 ['nc|ENSG00000125846|P52736-2|ZNF133', 'ENSG00000125846|ENST00000425686|ZNF133', 'nc|ENSG00000125846|P52736-5|ZNF133', 'nc|ENSG00000125846|P52736-3|ZNF133', 'nc|ENSG00000125846|P52736-4|ZNF133'] 44338 10094 IMGFLGIK True NCI_RA007_Epitope_Rep2 877.5095458962099 877.50844993586 43.853 2 -0.9488320161121951 0.28554659241363306 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2'] 74645 22221 NLFFAGTETVS True NCI_RA007_Epitope_Rep5 1184.57135377528 1184.5702499358601 92.62 2 -0.9488554237100378 0.28554659241363306 1.0 ['ENSG00000197838|ENST00000330436|CYP2A13'] 25047 27560 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 113.24 2 -0.9489315329071649 0.28554659241363306 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 72641 7500 MWFSWGVL True PC9_epitope_Rep4 1024.4840594243597 1024.4829699358602 36.212 2 -0.94896368517147 0.28555634417995196 1.0 ['nc|ENSG00000176884|Q05586-2|GRIN1', 'nc|ENSG00000176884|Q05586-3|GRIN1', 'nc|ENSG00000176884|Q05586-7|GRIN1', 'nc|ENSG00000176884|Q05586-4|GRIN1', 'ENSG00000176884|ENST00000371561|GRIN1', 'nc|ENSG00000176884|Q05586-6|GRIN1', 'nc|ENSG00000176884|Q05586-5|GRIN1'] 123450 6633 VIEQMKEQHHR True NCI_RA007_Epitope_Rep2 1433.71976642781 1433.7186699358601 30.411 2 -0.9490414320854499 0.2856070429263632 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 56420 7859 LDSHYQTEP True PC9_epitope_Rep6 1088.47745339044 1088.47634993586 39.632 2 -0.9491076145075599 0.2856440913930063 1.0 ['ENSG00000218336|ENST00000511685|TENM3'] 85586 8674 QLLQQYRVP True H1975_Epitope_Rep2 1143.64004247179 1143.6389499358602 38.325 2 -0.9491428453090097 0.28565384142929284 1.0 ['ENST00000370177.1_1_20:62152208-62152943:+|nuORF', 'ENST00000370179.7_1_20:62152139-62153033:+|nuORF'] 119886 13357 VEVTYYHK True PC9_epitope_Rep1 1037.51819600361 1037.5170899358602 56.237 2 -0.9492092926527604 0.28565969236648514 1.0 ['ENSG00000184611|ENST00000332142|KCNH7', 'nc|ENSG00000184611|Q9NS40-2|KCNH7', 'KCNH7|p.S104F|2|0.32|ENSG00000184611|chr2:162537077-162537077|G/A|missense_variant'] 25045 27306 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 111.89 2 -0.9492140708458133 0.28565969236648514 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 56566 4337 LDVTDKEEERE True NCI_RA007_Epitope_Rep1 1361.63105347937 1361.6293949037902 20.979 3 -0.9492856149682369 0.28567919094867 1.0 ['FANCI|p.G941del|1|0.15|ENSG00000140525|chr15:89300316-89300318|AGG/-|inframe_deletion'] 82778 5108 PVRNQYLEK True NCI_RA007_Epitope_Rep3 1145.61930702721 1145.61820993586 27.084 2 -0.9493236763752831 0.28567919094867 1.0 ['RASA2-ACPL2|1|fusion', 'nc|ENSG00000155893|Q8TE99-2|PXYLP1', 'ENSG00000155893|ENST00000286353|PXYLP1'] 81685 2407 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 13.569 3 -0.9493341292484675 0.28568893984059396 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 17455 194 EHGLPRHCRW True PC9_epitope_Rep3 1289.6199928168899 1289.61835490379 1.0779 3 -0.9493532169068676 0.2856986884664201 1.0 ['ENST00000556626.5_3_14:65269000-65271771:-|nuORF'] 13499 6892 DPERSAAPRRR True H1975_Epitope_Rep1 1309.6963285612899 1309.6952299358602 31.551 2 -0.94944673085547 0.28575912657795977 1.0 ['ENST00000313565.10_1_16:71898855-71918020:-|nuORF', 'ENST00000568961.5_1_16:71915334-71918023:-|nuORF'] 46398 14404 ITINRIEL True PC9_epitope_Rep4 970.58113061334 970.58002993586 63.315 2 -0.9494493069631066 0.28575912657795977 1.0 ['ENST00000503588.1_1_4:129192337-129192508:-|nuORF'] 41908 6486 IEAEHKTV True NCI_RA007_Epitope_Rep2 925.48689587533 925.48578993586 29.838 2 -0.9495088603589886 0.2857922676965487 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 101114 13715 SLVERYVHDRF True NCI_RA007_Epitope_Rep1 1419.72589735407 1419.72480993586 57.364 2 -0.9495151192033007 0.2857922676965487 1.0 ['ENST00000495458.5_1_5:176729817-176730289:-|nuORF', 'ENST00000471466.5_1_5:176729278-176730289:-|nuORF', 'ENST00000393610.3_1_5:176729603-176730289:-|nuORF', 'ENST00000478234.5_1_5:176729278-176730289:-|nuORF', 'ENSG00000169228|ENST00000303251|RAB24'] 133601 18217 WIMLILVG True NCI_RA007_Epitope_Rep3 943.5564960886298 943.55538993586 79.773 2 -0.9495454058090027 0.2858020142471137 1.0 ['ENST00000489322.5_1_22:24226412-24227033:+|nuORF', 'ENST00000461809.5_1_22:24225898-24227033:+|nuORF', 'nc|ENSG00000133460|Q9BYW1|SLC2A11', 'ENSG00000133460|ENST00000316185|SLC2A11', 'nc|ENSG00000133460|Q9BYW1-4|SLC2A11'] 71216 24499 MFRRKRCL True H1975_Epitope_Rep3 1108.6110083563199 1108.60990993586 101.97 2 -0.9495701271215724 0.2858078602620087 1.0 ['ENST00000465878.6_2_16:57792547-57792799:-|nuORF'] 36859 14452 GVPYLEFRYK True NCI_RA007_Epitope_Rep5 1270.6710082468996 1270.66990993586 62.272 2 -0.9495730626563016 0.2858078602620087 1.0 ['SHANK1|p.L1994Sfs*41|1|0.5|ENSG00000161681|chr19:50662472-50662473|-/G|frameshift_variant', 'nc|ENSG00000161681|Q9Y566-3|SHANK1', 'ENSG00000161681|ENST00000293441|SHANK1'] 80545 15233 PLLTPAPLDSG True H1975_Epitope_Rep2 1079.5862755634298 1079.5851699358602 63.752 2 -0.9495785375208673 0.2858137059578068 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant'] 103683 3325 SRDQNRRYDQR True NCI_RA007_Epitope_Rep1 1492.72433421428 1492.72267490379 16.829 3 -0.9495875149550395 0.2858137059578068 1.0 ['nc|ENSG00000176406|Q9UQ26-4|RIMS2', 'nc|ENSG00000176406|Q9UQ26-5|RIMS2', 'nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2'] 3765 9668 AGTRANNTLL True PC9_epitope_Rep5 1029.55670677065 1029.55560993586 42.155 2 -0.9496454331964176 0.28582345155083716 1.0 ['ENSG00000111241|ENST00000228837|FGF6'] 32293 16360 GFTGDGFT True PC9_epitope_Rep3 800.33408363204 800.3335349679301 68.064 1 -0.9497064118635656 0.2858390415631908 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2'] 137436 19027 YLMPSPNL True PC9_epitope_Rep1 933.46298962661 933.46188993586 77.978 2 -0.9497174357743309 0.2858390415631908 1.0 ['ENSG00000101134|ENST00000262593|DOK5', 'nc|ENSG00000101134|Q9P104-2|DOK5'] 65684 4520 LSHFCDVAA True PC9_epitope_Rep4 961.4327521274898 961.43164993586 23.875 2 -0.9497688523305133 0.2858390415631908 1.0 ['ENSG00000184058|ENST00000649276|TBX1'] 19595 20809 ELRIQLRRTHQ True H1975_Epitope_Rep3 1448.8324281112798 1448.8307849037901 86.931 3 -0.949800807279325 0.2858448859294837 1.0 ['ENSG00000088320|ENST00000201979|REM1'] 73294 12739 NEIYIEIKN True NCI_RA007_Epitope_Rep3 1134.5920892198599 1134.59098993586 57.342 2 -0.9498023623959295 0.2858448859294837 1.0 ['ENST00000476941.5_1_3:142525091-142525199:+|nuORF'] 55364 11415 LASLYVMMTVT True PC9_epitope_Rep1 1227.62431794827 1227.62322993586 48.785 2 -0.9498258370774071 0.2858682749116511 1.0 ['nc|ENSG00000164300|Q86VE9-3|SERINC5', 'nc|ENSG00000164300|Q86VE9-2|SERINC5', 'nc|ENSG00000164300|Q86VE9|SERINC5', 'ENSG00000164300|ENST00000507668|SERINC5'] 30870 9161 GARHHTQLI True PC9_epitope_Rep4 1031.5624608574299 1031.56136993586 42.83 2 -0.949867772570773 0.2858916632555601 1.0 ['ENST00000469702.5_1_2:114462911-114480749:-|nuORF'] 36912 5226 GVQTILNTRN True PC9_epitope_Rep2 1114.6094706195 1114.60836993586 25.493 2 -0.949910500212518 0.28595598368148883 1.0 ['ENST00000561273.5_1_14:24761833-24768312:-|nuORF', 'ENSG00000157379|ENST00000288111|DHRS1', 'ENST00000559483.5_1_14:24761442-24768312:-|nuORF'] 81610 4708 PRPIQDILT True NCI_RA007_Epitope_Rep3 1051.6025943339098 1051.6014899358602 25.466 2 -0.9499270959542563 0.2859657021241763 1.0 ['nc|ENSG00000164691|Q8N103-4|TAGAP', 'ENSG00000164691|ENST00000367066|TAGAP'] 59353 10097 LGKNWEEHSV True PC9_epitope_Rep3 1197.57783613805 1197.57619490379 43.792 3 -0.9499336095240419 0.2859657021241763 1.0 ['ENSG00000172000|ENST00000307635|ZNF556'] 82903 18509 PVYRLPALP True PC9_epitope_Rep3 1024.6069514383596 1024.60584993586 76.414 2 -0.9499386679739247 0.2859657021241763 1.0 ['ENSG00000167178|ENST00000453268|ISLR2'] 16797 12862 EFKDDEFVKK True NCI_RA007_Epitope_Rep2 1283.6397676882696 1283.6386699358602 54.649 2 -0.9499500427113455 0.2859657021241763 1.0 ['MYEF2|p.E151D|1|0.22|ENSG00000104177|chr15:48166005-48166005|T/A|missense_variant'] 59186 12789 LGFQKRWRK True PC9_epitope_Rep2 1217.71454482473 1217.7134499358601 54.495 2 -0.949976113555228 0.2859657021241763 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 33033 10824 GIYWFRYIHV True PC9_epitope_Rep4 1352.70297708152 1352.7013349037902 49.395 3 -0.9499883448385117 0.2859657021241763 1.0 ['ENST00000529624.5_3_15:28916682-28918849:+|nuORF'] 111179 13257 TLFDVECKEGG True PC9_epitope_Rep1 1196.5383393948398 1196.53669490379 55.859 3 -0.9499898672408406 0.2859657021241763 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 110612 13845 TITHLLRTHL True NCI_RA007_Epitope_Rep2 1203.70879073795 1203.7076899358601 58.504 2 -0.9499964880123168 0.2859657021241763 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5', 'ENST00000475300.1_1_10:45935943-45936950:+|nuORF'] 115242 4547 TVDDNPTK True NCI_RA007_Epitope_Rep4 888.41887588516 888.41776993586 23.893 2 -0.9500553736916635 0.2859851843767479 1.0 ['nc|ENSG00000186153|Q9NZC7-7|WWOX', 'ENST00000562214.5_1_16:78133657-78152856:+|nuORF', 'ENST00000561846.5_1_16:78133657-78314740:+|nuORF', 'nc|ENSG00000186153|Q9NZC7-3|WWOX', 'WWOX|p.W218*|1|0.22|ENSG00000186153|chr16:78424917-78424917|G/-|frameshift_variant', 'nc|ENSG00000186153|Q9NZC7-5|WWOX', 'nc|ENSG00000186153|Q9NZC7-6|WWOX', 'nc|ENSG00000186153|Q9NZC7-2|WWOX', 'ENST00000569332.5_1_16:78133625-79245690:+|nuORF', 'ENSG00000186153|ENST00000566780|WWOX'] 83789 6664 QEEKTEMHKAR True H1975_Epitope_Rep1 1385.6721475290499 1385.67104993586 30.685 2 -0.9500620039241547 0.2859851843767479 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 30426 6551 GAGAAAEPGAL True PC9_epitope_Rep6 883.4399456829099 883.43884993586 33.88 2 -0.9500870095021341 0.28599102355974515 1.0 ['ENST00000216367.9_1_14:50150408-50154940:-|nuORF'] 69551 18960 LVTGGYDYDV True PC9_epitope_Rep1 1100.50260550912 1100.5015099358602 77.713 2 -0.9500952612532996 0.28599102355974515 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 115763 19068 TVLQRLDV True PC9_epitope_Rep3 942.5498304850599 942.54872993586 78.568 2 -0.9501329261050258 0.2860144057623049 1.0 ['nc|ENSG00000164253|Q9HAD4-2|WDR41', 'ENSG00000164253|ENST00000296679|WDR41', 'ENST00000507452.5_1_5:76747118-76788033:-|nuORF'] 12303 6930 DITDRPDP True H1975_Epitope_Rep2 927.42977492203 927.42866993586 31.577 2 -0.9501579448447904 0.28602024390909336 1.0 ['ENSG00000253953|ENST00000519479|PCDHGB4', 'nc|ENSG00000253953|Q9UN71-2|PCDHGB4'] 75044 22924 NMDYWKIL True PC9_epitope_Rep5 1081.52665251233 1081.52554993586 93.168 2 -0.9501601969499478 0.28602024390909336 1.0 ['ENSG00000111432|ENST00000229030|FZD10'] 81342 23770 PPRRGGVLLG True NCI_RA007_Epitope_Rep3 1020.6192474575597 1020.61867496793 103.03 1 -0.9502115849937077 0.2860533638893436 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 53495 27162 KVLEKYWLYKI True PC9_epitope_Rep3 1481.86462267301 1481.86297490379 111.75 3 -0.9502138947432031 0.2860533638893436 1.0 ['ENST00000512116.5_1_4:123818829-123833766:-|nuORF', 'ENST00000503370.5_1_4:123814355-123833769:-|nuORF'] 77786 10131 PADSGLITPG True PC9_epitope_Rep5 926.4709114580199 926.46980993586 43.953 2 -0.950224111025536 0.28606310275682384 1.0 ['ENSG00000087365|ENST00000322535|SF3B2'] 108647 9682 TELAAYLENR True PC9_epitope_Rep3 1178.59315184902 1178.5920499358601 42.19 2 -0.9502367679096735 0.2860728413586141 1.0 ['nc|ENSG00000149091|Q13574-3|DGKZ', 'nc|ENSG00000149091|Q13574-6|DGKZ', 'ENSG00000149091|ENST00000456247|DGKZ', 'nc|ENSG00000149091|Q13574-4|DGKZ', 'nc|ENSG00000149091|Q13574-7|DGKZ', 'nc|ENSG00000149091|Q13574-5|DGKZ', 'nc|ENSG00000149091|Q13574-1|DGKZ', 'ENST00000528173.5_1_11:46400622-46401494:+|nuORF', 'ENST00000534802.1_1_11:46400234-46401494:+|nuORF'] 81742 7029 PSCCCCCCRCF True PC9_epitope_Rep2 1226.32917536638 1226.32753490379 32.439 3 -0.9502846650064175 0.2860825796947252 1.0 ['GDF10|p.Q15Sfs*105|1|0.29|ENSG00000266524|chr10:47300691-47300691|C/-|frameshift_variant'] 64634 25232 LRFRRKRRHH True PC9_epitope_Rep2 1460.88138442272 1460.88087496793 102.72 1 -0.9503383332497598 0.28616051942383236 1.0 ['nc|ENSG00000145888|P23415|GLRA1', 'ENSG00000145888|ENST00000274576|GLRA1'] 39298 10935 HLQKPYEIN True PC9_epitope_Rep4 1140.5927579262 1140.59110490379 49.83 3 -0.9503669584901762 0.28618389644401404 1.0 ['ENSG00000110367|ENST00000534980|DDX6'] 87546 16307 QTITKQYYRR True PC9_epitope_Rep6 1355.73098273451 1355.72988993586 75.086 2 -0.9503949236394735 0.28619363286684674 1.0 ['nc|ENSG00000139998|P59190-2|RAB15', 'ENSG00000139998|ENST00000533601|RAB15'] 99527 11975 SLETLGLWPV True NCI_RA007_Epitope_Rep1 1113.60701100801 1113.6059099358602 50.567 2 -0.9504644716834164 0.28620336902407423 1.0 ['ENST00000444521.6_1_1:2521013-2521196:+|nuORF'] 74211 5945 NIDLQPGSSD True PC9_epitope_Rep3 1044.47236801 1044.4712699358602 27.925 2 -0.950532559508291 0.2862072257606961 1.0 ['ENSG00000171840|ENST00000305108|NINJ2'] 37222 15506 GVVDKIDYYL True PC9_epitope_Rep1 1183.61249031127 1183.6113899358602 64.466 2 -0.9505717949775699 0.2862072257606961 1.0 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant'] 96921 3991 SETQRQEI True PC9_epitope_Rep6 989.4777877436098 989.47668993586 22.118 2 -0.9505730530427111 0.2862072257606961 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4'] 101408 16523 SNFWAQAVF True PC9_epitope_Rep2 1068.5028802926397 1068.5017899358602 68.796 2 -0.9506020972494242 0.2862072257606961 1.0 ['nc|ENSG00000182504|Q8IW35-2|CEP97'] 81343 23910 PPRRGGVLLG True NCI_RA007_Epitope_Rep4 1020.6192474575597 1020.61867496793 103.7 1 -0.9506310316964027 0.2862072257606961 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 64442 7390 LQSFVQGGQVG True NCI_RA007_Epitope_Rep1 1118.57202248162 1118.57092993586 32.74 2 -0.9506715307770056 0.2862072257606961 1.0 ['ENST00000496727.1_1_17:18154365-18154758:-|nuORF'] 116178 23704 TVTITVLDI True PC9_epitope_Rep1 973.5695628701299 973.56846993586 95.972 2 -0.9507065696159271 0.2862266955798317 1.0 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 58801 5753 LFQDYERWVRP True PC9_epitope_Rep2 1507.7571974823497 1507.75555490379 27.522 3 -0.9507682328117387 0.2862266955798317 1.0 ['ENSG00000169684|ENST00000299565|CHRNA5'] 115606 20141 TVILFLIML True H1975_Epitope_Rep2 1061.65587577673 1061.65476993586 83.464 2 -0.9508464376169601 0.28626370628989145 1.0 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1'] 34192 7619 GPGQKARK True H1975_Epitope_Rep3 840.4929843152798 840.49188993586 34.287 2 -0.9508597275379942 0.28627344016365497 1.0 ['NOP2|p.R16Q|1|0.09|ENSG00000111641|chr12:6567872-6567872|C/T|missense_variant'] 64285 16035 LQLRWQEYREL True H1975_Epitope_Rep1 1532.8099613312 1532.80886993586 67.015 2 -0.9509611990072491 0.2862968114993317 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 71963 6402 MPWFFLWHLKK True NCI_RA007_Epitope_Rep4 1531.8162330119496 1531.81459490379 31.227 3 -0.9510148750335145 0.2862987358343902 1.0 ['ENST00000342922.8_1_11:47290950-47291097:+|nuORF'] 97195 20609 SFISKRRVP True PC9_epitope_Rep2 1088.6454622054 1088.6443699358601 84.706 2 -0.9510166781551301 0.2862987358343902 1.0 ['nc|ENSG00000111554|Q8TC05-4|MDM1', 'nc|ENSG00000111554|Q8TC05|MDM1', 'ENSG00000111554|ENST00000682720|MDM1', 'ENST00000393543.7_1_12:68720268-68720871:-|nuORF', 'nc|ENSG00000111554|Q8TC05-2|MDM1', 'ENST00000545724.2_1_12:68718988-68726025:-|nuORF'] 92787 24876 RRKRRIYES True NCI_RA007_Epitope_Rep5 1262.73198579402 1262.7308899358602 103.18 2 -0.951032948448249 0.2862987358343902 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 74372 11052 NISVDIHCGE True H1975_Epitope_Rep3 1085.48115887189 1085.48006993586 47.601 2 -0.9510835059271684 0.28631820103366923 1.0 ['WHSC1L1-DDHD2|1|fusion', 'ENSG00000085788|ENST00000397166|DDHD2'] 45319 11965 ISCLTVLVFY True H1975_Epitope_Rep1 1156.620218544 1156.6191299358602 51.028 2 -0.9510835931833723 0.28631820103366923 1.0 ['nc|ENSG00000101204|P43681-2|CHRNA4', 'ENSG00000101204|ENST00000370263|CHRNA4', 'CHRNA4|p.W385Lfs*33|1|0.3|ENSG00000101204|chr20:63350257-63350258|-/A|frameshift_variant', 'nc|ENSG00000120903|Q15822-2|CHRNA2', 'ENSG00000120903|ENST00000407991|CHRNA2'] 120840 6851 VGDNRVVL True PC9_epitope_Rep4 870.4923156089399 870.49120993586 33.572 2 -0.9511056155924397 0.2863279332351497 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.P5041T|1|0.35|ENSG00000117983|chr11:1252884-1252884|C/A|missense_variant'] 4903 18130 ALGLANFNAI True PC9_epitope_Rep4 1002.5498304850599 1002.54872993586 77.802 2 -0.9511456758231656 0.2863493188976915 1.0 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-3|COL6A3', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3'] 87556 18117 QTLSKLIDYIY True PC9_epitope_Rep2 1355.7336680731098 1355.73256993586 74.988 2 -0.9511652011546492 0.2863493188976915 1.0 ['ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF', 'nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3'] 115745 19145 TVLMRLLAS True PC9_epitope_Rep4 1002.5895871220599 1002.58848993586 81.736 2 -0.951183551288417 0.2863493188976915 1.0 ['BPNT1|p.V12L|1|0.14|ENSG00000162813|chr1:220079813-220079813|C/A|missense_variant'] 88315 9185 QYLETIPESEP True NCI_RA007_Epitope_Rep4 1304.6136125100797 1304.61250993586 42.175 2 -0.9511937032016291 0.2863493188976915 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 30908 7125 GASATQAQAW True PC9_epitope_Rep2 989.4566583762097 989.45556993586 32.8 2 -0.9511970085221076 0.2863493188976915 1.0 ['ENST00000491370.1_1_2:220435199-220436548:-|nuORF'] 30972 6569 GASWKREEWP True NCI_RA007_Epitope_Rep2 1244.5938205553598 1244.59272993586 30.164 2 -0.9512448518610467 0.2863824159042256 1.0 ['ENST00000320330.7_1_16:29827508-29827685:+|nuORF'] 128958 13527 VSVLVRHQR True NCI_RA007_Epitope_Rep2 1092.6516102150001 1092.65050993586 57.258 2 -0.951252101928577 0.2863824159042256 1.0 ['ENSG00000251247|ENST00000420450|ZNF345'] 68622 7956 LVADYGHD True PC9_epitope_Rep4 888.39774651776 888.39664993586 38.046 2 -0.9512895024275424 0.2864194164166894 1.0 ['ENSG00000003509|ENST00000002125|NDUFAF7', 'nc|ENSG00000003509|Q7L592-2|NDUFAF7', 'ENST00000419278.2_1_2:37471065-37474467:+|nuORF'] 84489 6618 QGQDKHEEYF True NCI_RA007_Epitope_Rep5 1279.5469299325898 1279.5452849037902 32.117 3 -0.9513068372881837 0.2864213353694286 1.0 ['nc|ENSG00000163050|Q8NI60-3|COQ8A', 'ENSG00000163050|ENST00000366777|COQ8A'] 122274 5472 VGRRSPGN True PC9_epitope_Rep5 841.4518477792899 841.45074993586 26.059 2 -0.9513589324770726 0.2864213353694286 1.0 ['ENSG00000178605|ENST00000326153|GTPBP6'] 82730 17103 PVPTLWNEPAE True NCI_RA007_Epitope_Rep1 1251.6135529404298 1251.6129749679299 70.659 1 -0.9513656806906722 0.2864213353694286 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 118003 4997 VASKTGFG True NCI_RA007_Epitope_Rep5 765.4021036222099 765.40100993586 25.925 2 -0.9514682104700564 0.28643688817386087 1.0 ['CON__Q3TTY5'] 67530 7406 LTEM[Oxidation]LLNVEY True H1975_Epitope_Rep1 1239.60569105911 1239.60458993586 33.49 2 -0.9514729014295762 0.28643688817386087 1.0 ['ENST00000418924.6_1_14:93042630-93154594:+|nuORF', 'ENSG00000100599|ENST00000216487|RIN3', 'nc|ENSG00000100599|Q8TB24-4|RIN3', 'ENST00000553959.1_1_14:93125773-93154048:+|nuORF'] 7248 20067 ARKLQSAARPP True H1975_Epitope_Rep2 1193.6992886834098 1193.69818993586 83.166 2 -0.951495867935305 0.28643688817386087 1.0 ['ENST00000378204.6_1_8:119123393-119123786:-|nuORF'] 63216 25511 LNVVLQLL True PC9_epitope_Rep1 910.5851533646198 910.58404993586 103.12 2 -0.9515155525769322 0.28646025058966285 1.0 ['ENSG00000141314|ENST00000269051|RHBDL3', 'nc|ENSG00000141314|P58872-3|RHBDL3', 'nc|ENSG00000141314|P58872-2|RHBDL3'] 61686 15190 LLIAFHVIMI True NCI_RA007_Epitope_Rep2 1168.7042229514798 1168.70312993586 63.778 2 -0.9515334679472218 0.28646607315709827 1.0 ['ENST00000265198.8_1_6:154476969-154477143:-|nuORF'] 136795 22734 YISRLRRTV True PC9_epitope_Rep4 1162.69347502698 1162.6923699358601 95.664 2 -0.9515390985324514 0.28646607315709827 1.0 ['CON__ENSEMBL:ENSBTAP00000038253'] 30556 8438 GAKDLLSH True PC9_epitope_Rep5 839.45011644379 839.44900993586 37.399 2 -0.9516676890191755 0.28658478400152676 1.0 ['ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6'] 111480 11299 TLLILFLKIIF True H1975_Epitope_Rep2 1332.8784818319998 1332.87682490379 48.508 3 -0.9517028170269504 0.28658478400152676 1.0 ['ENST00000591247.5_1_17:42113248-42113383:-|nuORF'] 3547 6871 AGNARAPGCR True NCI_RA007_Epitope_Rep4 971.4719316008699 971.47082993586 33.047 2 -0.9517144270451559 0.28658478400152676 1.0 ['ENST00000359878.7_1_2:201374367-201374727:-|nuORF'] 64164 27289 LQFNNKRRLRR True PC9_epitope_Rep3 1499.8909460469097 1499.8893149037901 112.36 3 -0.9517229634230636 0.28658478400152676 1.0 ['nc|ENSG00000100298|Q6NTF7-4|APOBEC3H', 'nc|ENSG00000100298|Q6NTF7-2|APOBEC3H', 'ENSG00000100298|ENST00000442487|APOBEC3H', 'nc|ENSG00000100298|Q6NTF7|APOBEC3H', 'ENST00000474235.1_1_22:39496283-39496472:+|nuORF'] 22456 13753 ETGTTEEHSL True PC9_epitope_Rep5 1102.4778473132599 1102.4767499358602 57.922 2 -0.9517537090481103 0.28658478400152676 1.0 ['nc|ENSG00000137478|O94868-3|FCHSD2', 'nc|ENSG00000137478|O94868-2|FCHSD2', 'MAP3K3-FCHSD2|1|fusion', 'ENSG00000137478|ENST00000409418|FCHSD2'] 65550 8527 LSGEDKREHRG True H1975_Epitope_Rep1 1282.6378106256598 1282.6367099358602 37.727 2 -0.9518017397021735 0.28658478400152676 1.0 ['nc|ENSG00000141161|Q8IWX7-2|UNC45B', 'ENSG00000141161|ENST00000394570|UNC45B', 'nc|ENSG00000141161|Q8IWX7|UNC45B'] 124647 10380 VLIFFLVRFFL True NCI_RA007_Epitope_Rep2 1412.8584150937597 1412.85676490379 44.968 3 -0.9518058096369942 0.28658478400152676 1.0 ['ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 43298 5754 IHDTADWKDL True NCI_RA007_Epitope_Rep1 1212.57750178488 1212.57640993586 26.438 2 -0.9518069706464989 0.28658478400152676 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2', 'nc|ENSG00000070610|Q9HCG7-3|GBA2', 'ENST00000488292.1_1_9:35738625-35739104:-|nuORF'] 22610 6325 ETPVDLASSMP True NCI_RA007_Epitope_Rep1 1145.52744035797 1145.52634993586 28.627 2 -0.951849198422614 0.2866081408980616 1.0 ['ENSG00000072364|ENST00000265343|AFF4', 'AFF4|p.S1081Qfs*2|2|0.36|ENSG00000072364|chr5:132883460-132883463|AAGA/-|frameshift_variant', 'nc|ENSG00000072364|Q9UHB7-2|AFF4', 'AFF4|p.K863Nfs*63|1|0.44|ENSG00000072364|chr5:132892212-132892212|C/-|frameshift_variant'] 124036 19025 VKNVAKFSI True PC9_epitope_Rep5 1004.6018660579199 1004.60076993586 78.206 2 -0.951889075615324 0.286617865565234 1.0 ['ENST00000343776.9_1_1:227842171-227842369:+|nuORF'] 68007 16451 LTMCYRPFF True PC9_epitope_Rep3 1176.5460080579198 1176.54490993586 68.417 2 -0.9519574610655162 0.28669183898801814 1.0 ['ENST00000356721.3_1_16:48396017-48396254:-|nuORF'] 54563 8034 LAATAVSF True PC9_epitope_Rep3 778.42250471362 778.42140993586 35.879 2 -0.9519648984513353 0.28669183898801814 1.0 ['nc|ENSG00000214655|A7E2V4-5|ZSWIM8', 'ENSG00000214655|ENST00000604729|ZSWIM8', 'nc|ENSG00000214655|A7E2V4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-3|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-2|ZSWIM8', 'ENST00000603195.5_1_10:75559086-75560534:+|nuORF', 'ENST00000433366.6_1_10:75557251-75561274:+|nuORF'] 10500 3385 CNMRYRAF True PC9_epitope_Rep1 1059.4742400999899 1059.4731499358602 17.939 2 -0.9520500312535671 0.2867073769151082 1.0 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000556300.6_1_14:74417008-74425067:+|nuORF', 'ENST00000553922.5_1_14:74417278-74422293:+|nuORF', 'ENST00000555196.5_1_14:74417278-74423148:+|nuORF', 'ENST00000555552.5_1_14:74417035-74423148:+|nuORF', 'ENST00000554193.5_1_14:74417035-74422669:+|nuORF'] 109140 12705 TFLGATAGMRL True PC9_epitope_Rep3 1136.60121443492 1136.59957490379 53.893 3 -0.9520596173014523 0.2867073769151082 1.0 ['nc|ENSG00000188833|Q5MY95-2|ENTPD8', 'ENSG00000188833|ENST00000371506|ENTPD8'] 94185 22953 RWLVRFKTI True NCI_RA007_Epitope_Rep5 1217.7396969434099 1217.73805490379 95.514 3 -0.9520857956871148 0.2867073769151082 1.0 ['ENSG00000185518|ENST00000394232|SV2B', 'nc|ENSG00000185518|Q7L1I2-2|SV2B'] 80791 20999 PLSSEPPAA True NCI_RA007_Epitope_Rep2 867.4337976733099 867.43324496793 86.861 1 -0.9521465640072432 0.2867404519804814 1.0 ['ENSG00000124608|ENST00000244571|AARS2'] 111016 19037 TLDKMIRNPA True PC9_epitope_Rep1 1157.6226781554901 1157.6215899358601 78.016 2 -0.9521521025371348 0.2867404519804814 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'nc|ENSG00000154928|P54762-5|EPHB1'] 90691 23488 RKLRSLWQRP True PC9_epitope_Rep3 1338.7996714310198 1338.7980149037899 95.625 3 -0.9521794270202735 0.2867638038900323 1.0 ['MPO|p.R135Q|1|0.42|ENSG00000005381|chr17:58279859-58279859|C/T|missense_variant'] 25027 26709 FDDGDCCD True PC9_epitope_Rep3 888.226583982 888.22548993586 109.42 2 -0.9522534349237628 0.28680659670164915 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 19574 14128 ELREATWYELR True H1975_Epitope_Rep3 1464.7361276845998 1464.7350299358602 59.673 2 -0.9522663606854029 0.28680659670164915 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1', 'DSCAML1|p.A1642Rfs*2|1|0.38|ENSG00000177103|chr11:117435773-117435777|GAGCA/-|frameshift_variant'] 135468 6036 YEATLEEC[Carbamidomethyl]C[Carbamidomethyl]AK True H1975_Epitope_Rep3 1372.5639030785399 1372.56280993586 28.232 2 -0.9522663951992589 0.28680659670164915 1.0 ['CON__P02769'] 69246 7672 LVNQPPHS True PC9_epitope_Rep1 890.4610154806601 890.45990993586 34.332 2 -0.9522798771759664 0.2868162119436343 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 27302 13285 FLYTAAKKRK True NCI_RA007_Epitope_Rep2 1224.7342772097998 1224.73318993586 56.311 2 -0.952298728892713 0.2868162119436343 1.0 ['IPO8|p.L397F|1|0.31|ENSG00000133704|chr12:30666207-30666207|G/A|missense_variant'] 93196 22640 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 93.525 2 -0.9523355965555232 0.2868162119436343 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 81018 24677 PNTVIILIG True PC9_epitope_Rep4 938.5800679841799 938.57896993586 103.41 2 -0.9523860371014912 0.2868162119436343 1.0 ['ENSG00000119396|ENST00000373840|RAB14'] 29933 26144 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 108.14 3 -0.9524093592136817 0.2868162119436343 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 26334 21304 FIFLFKWIEER True PC9_epitope_Rep1 1526.82857151746 1526.82746993586 86.773 2 -0.9524399683760418 0.2868162119436343 1.0 ['BAP1|p.V386Efs*45|1|0.21|ENSG00000163930|chr3:52404546-52404547|-/CT|frameshift_variant', 'ENSG00000163930|ENST00000460680|BAP1'] 7692 10270 ASPQADDQDM True H1975_Epitope_Rep1 1076.40805350128 1076.4069499358602 44.448 2 -0.9524618300815496 0.2868162119436343 1.0 ['ENSG00000230301|ENST00000615035|OR5H6', 'nc|ENSG00000230301|Q8NGV6|OR5H6', 'nc|ENSG00000232535|P0DN80|OR5H8', 'ENSG00000197938|ENST00000355273|OR5H2', 'ENSG00000236032|ENST00000641380|OR5H14', 'ENSG00000231192|ENST00000641874|OR5H1'] 108163 14634 TDSLFLHYLQE True NCI_RA007_Epitope_Rep1 1364.66123140884 1364.6601299358601 60.975 2 -0.9524878655866186 0.2868162119436343 1.0 ['nc|ENSG00000092200|Q96KN7-3|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-2|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-5|RPGRIP1', 'ENSG00000092200|ENST00000400017|RPGRIP1', 'nc|ENSG00000092200|Q96KN7-6|RPGRIP1'] 18888 5403 ELELEASWP True NCI_RA007_Epitope_Rep2 1072.50769088956 1072.5065899358601 25.636 2 -0.9525275393050457 0.2868395590018943 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'ENST00000570365.1_1_17:3970518-3976036:-|nuORF'] 114087 4929 TRRCVCVAQRW True NCI_RA007_Epitope_Rep1 1376.6917778581596 1376.69068993586 23.254 2 -0.9525682379191365 0.28684927773235214 1.0 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 109033 7340 TEYEFRVT True H1975_Epitope_Rep2 1043.4923751785898 1043.4912699358601 33.175 2 -0.9526155553343328 0.28685508707857515 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 131409 246 VVTKEKLLLE True NCI_RA007_Epitope_Rep2 1170.72237511342 1170.72073490379 1.3715 3 -0.9526196344967548 0.28685508707857515 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 81344 24834 PPRRGGVLLG True NCI_RA007_Epitope_Rep5 1020.6192474575597 1020.61867496793 103.01 1 -0.9526621124617555 0.286856987122709 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 101235 6149 SLWEGAPP True H1975_Epitope_Rep3 855.4126683059098 855.41156993586 28.662 2 -0.9526730771604633 0.286856987122709 1.0 ['ENSG00000008516|ENST00000336577|MMP25', 'ENST00000553852.1_1_14:35515945-35516146:+|nuORF'] 118394 9563 VDLFRNASY True PC9_epitope_Rep1 1083.53490869691 1083.53380993586 41.642 2 -0.9526891565890226 0.286856987122709 1.0 ['SYNJ2BP|p.G89S|1|0.36|ENSG00000213463|chr14:70375708-70375708|C/T|missense_variant'] 97389 13099 SGDLARLIL True PC9_epitope_Rep6 956.5654805492 956.56438993586 61.998 2 -0.9527065332193754 0.2868627958630275 1.0 ['ENSG00000197043|ENST00000354546|ANXA6', 'nc|ENSG00000197043|P08133-2|ANXA6'] 41964 12678 IEDDLCGLFCS True PC9_epitope_Rep1 1213.49951135797 1213.49840993586 53.637 2 -0.9527166161278087 0.2868627958630275 1.0 ['ENSG00000178177|ENST00000635767|LCORL'] 3281 10117 AGGDWGLVVV True H1975_Epitope_Rep2 971.5076313199098 971.50652993586 43.911 2 -0.9527592149834136 0.28687251321741974 1.0 ['ENST00000361846.7_1_1:113161547-113161652:-|nuORF'] 29806 13134 FVTPLDGSV True NCI_RA007_Epitope_Rep5 933.4807478657299 933.47964993586 57.196 2 -0.9528194105740541 0.28691919880092653 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-3|MLXIP', 'ENST00000535430.1_12:122612431-122612782:+|nuORF'] 29074 9680 FTPPVVNVTWL True PC9_epitope_Rep4 1271.69140933831 1271.68975490379 44.864 3 -0.9528294916139752 0.28691919880092653 1.0 ['ENSG00000204287|ENST00000395388|HLA-DRA'] 5056 17903 ALLKGSSS True H1975_Epitope_Rep1 761.4283183700501 761.4277649679301 74.561 1 -0.9528885672462035 0.2869522563767168 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 78156 7998 PAPLTPPAPS True PC9_epitope_Rep1 946.5123823471799 946.51128993586 35.585 2 -0.9528935162263096 0.2869522563767168 1.0 ['ENST00000553027.1_1_12:49319137-49319416:-|nuORF'] 93202 24338 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 100.14 2 -0.95291628478365 0.28698922240540653 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 75661 5467 NQSYQESHCF True NCI_RA007_Epitope_Rep5 1241.47713612061 1241.4760299358602 27.715 2 -0.9529822432367608 0.2870125623347958 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 24889 2851 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 14.913 2 -0.9530009593311876 0.28701836612349446 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 51907 20594 KKRRTRRLYP True H1975_Epitope_Rep2 1372.85276963304 1372.85113490379 85.306 3 -0.9530021297733365 0.28701836612349446 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|40|2|sense'] 34346 16523 GPSIVTPPKDI True PC9_epitope_Rep1 1122.62847472858 1122.62683490379 68.38 3 -0.9530646359552747 0.2870280801667643 1.0 ['nc|ENSG00000163453|Q16270-2|IGFBP7', 'ENSG00000163453|ENST00000295666|IGFBP7'] 20777 12856 EQLRWRRQEE True H1975_Epitope_Rep1 1428.7222089559598 1428.72110993586 54.52 2 -0.9531244780547445 0.2870299727520436 1.0 ['ENST00000505073.5_1_4:91048743-91048815:+|nuORF'] 121534 15891 VGKLLNEV True PC9_epitope_Rep6 870.51746772762 870.51636993586 73.403 2 -0.9531280871934679 0.2870299727520436 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 82334 7157 PTSKKGLAP True PC9_epitope_Rep1 897.5283667644898 897.52726993586 32.34 2 -0.9531616977969123 0.2870299727520436 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 33368 8866 GLEMEGWEGG True H1975_Epitope_Rep3 1063.4280606698699 1063.4269699358601 39.105 2 -0.953181307526592 0.28703186518262197 1.0 ['ENST00000465911.1_1_1:6730943-6761860:-|nuORF'] 12401 18796 DKELEVLSLH True H1975_Epitope_Rep3 1181.6292030045702 1181.62810993586 78.835 2 -0.953212748911969 0.28703186518262197 1.0 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|5|fusion', 'FGFR3-TACC3|2|fusion', 'FGFR3-TACC3|14|fusion', 'ENSG00000068078|ENST00000440486|FGFR3', 'nc|ENSG00000068078|P22607-4|FGFR3'] 22389 14267 ETESSRLNTL True H1975_Epitope_Rep2 1148.567331024 1148.56622993586 60.027 2 -0.9532274756714548 0.28703186518262197 1.0 ['nc|nan|Q8IXR9-2|C12orf56', 'ENSG00000185306|ENST00000543942|C12orf56'] 103809 8977 SRGGAGHK True H1975_Epitope_Rep2 768.39908393044 768.39798993586 39.484 2 -0.9533514767307256 0.2870824478230069 1.0 ['nc|ENSG00000187595|Q66K41|ZNF385C', 'ENSG00000187595|ENST00000692273|ZNF385C', 'nc|ENSG00000187595|Q66K41-2|ZNF385C', 'ENST00000461831.1_1_17:40178917-40180633:-|nuORF'] 109448 7486 TGSQQQAWP True PC9_epitope_Rep5 1001.4566583762098 1001.45556993586 33.745 2 -0.9533736022069192 0.28708824891698226 1.0 ['ENSG00000087510|ENST00000201031|TFAP2C'] 45289 5026 ISAGGYIK True PC9_epitope_Rep4 807.44905381463 807.44794993586 25.96 2 -0.9533802112185749 0.28708824891698226 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 66105 21091 LSNRVWSI True PC9_epitope_Rep4 973.53451477409 973.53340993586 89.289 2 -0.953411126401446 0.2870979606849483 1.0 ['nc|ENSG00000106785|Q14142-4|TRIM14', 'nc|ENSG00000106785|Q14142-2|TRIM14', 'nc|ENSG00000106785|Q14142-3|TRIM14', 'ENSG00000106785|ENST00000341469|TRIM14'] 74910 15590 NLSDALDKIL True PC9_epitope_Rep5 1100.607739284 1100.60664993586 64.976 2 -0.9534938995917814 0.28712129468177855 1.0 ['ENST00000506915.1_1_4:190394211-190394298:+|nuORF'] 25043 22292 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 90.754 2 -0.953637568528238 0.28720491479478555 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 46605 15345 ITSRTKLSSI True PC9_epitope_Rep1 1104.65027280232 1104.64916993586 63.843 2 -0.9536414480313359 0.28720491479478555 1.0 ['ENSG00000168631|ENST00000462446|MUCL3', 'nc|ENSG00000168631|Q3MIW9-2|MUCL3', 'nc|ENSG00000168631|Q3MIW9|MUCL3'] 121971 7810 VGPVGEPAP True PC9_epitope_Rep3 821.4283183700499 821.4272299358599 35.033 2 -0.9536541667982914 0.28720491479478555 1.0 ['ENST00000574767.5_1_17:78518930-78519083:+|nuORF'] 20528 6950 EPYDPEKKWDK True H1975_Epitope_Rep3 1433.68269512941 1433.68158993586 31.695 2 -0.953664312967631 0.2872125967091642 1.0 ['ENSG00000071859|ENST00000393600|FAM50A'] 68498 15071 LTVLCMPGVI True PC9_epitope_Rep6 1044.5711601766 1044.5700699358601 70.024 2 -0.9537139249655461 0.2872125967091642 1.0 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9'] 52000 11468 KLEEMYEERER True PC9_epitope_Rep4 1510.7085926074199 1510.7074899358602 51.874 2 -0.9537222293072162 0.2872125967091642 1.0 ['ENSG00000163808|ENST00000326047|KIF15', 'nc|ENSG00000163808|Q9NS87-2|KIF15', 'nc|ENSG00000163808|Q9NS87-3|KIF15'] 10798 5304 DAEEALKQ True NCI_RA007_Epitope_Rep1 902.4345259492998 902.43342993586 24.712 2 -0.9537267376246712 0.2872125967091642 1.0 ['nc|ENSG00000166960|Q5BJE1-4|CCDC178', 'nc|ENSG00000166960|Q5BJE1-3|CCDC178', 'ENSG00000166960|ENST00000383096|CCDC178', 'CCDC178|p.R181L|1|0.14|ENSG00000166960|chr18:33346327-33346327|C/A|missense_variant', 'CCDC178|p.E306*|2|0.26|ENSG00000166960|chr18:33323597-33323598|-/A|frameshift_variant', 'nc|ENSG00000166960|Q5BJE1-2|CCDC178'] 56468 10002 LDTDLDHILP True NCI_RA007_Epitope_Rep1 1150.58700383942 1150.5859099358602 42.913 2 -0.9537441329962442 0.2872125967091642 1.0 ['nc|ENSG00000125247|Q5T4D3-4|TMTC4', 'nc|ENSG00000125247|Q5T4D3|TMTC4', 'ENSG00000125247|ENST00000342624|TMTC4', 'nc|ENSG00000125247|Q5T4D3-2|TMTC4', 'ENST00000480433.1_1_13:101320808-101322685:-|nuORF'] 111115 15430 TLELFFHNF True PC9_epitope_Rep4 1166.5760452329 1166.5744049037899 67.285 3 -0.9538309834330909 0.28724954710761813 1.0 ['ENST00000318709.8_1_7:32627221-32627503:+|nuORF'] 110940 13570 TLCCFCCP True PC9_epitope_Rep3 888.30022402992 888.29912993586 57.252 2 -0.9539087381525606 0.28728649649949606 1.0 ['ENSG00000135604|ENST00000367568|STX11'] 61474 20602 LLFKHMCY True PC9_epitope_Rep2 1053.51397965365 1053.5128899358601 84.679 2 -0.9539295907901439 0.2872902593157551 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 8982 11353 AVHEKVNIIPV True PC9_epitope_Rep6 1217.71320741205 1217.71156490379 54.713 3 -0.9539468775003389 0.2872902593157551 1.0 ['ENSG00000180096|ENST00000321367|SEPTIN1', 'ENST00000563957.6_1_16:30392441-30392549:-|nuORF'] 57271 6197 LEGEARKTKV True NCI_RA007_Epitope_Rep2 1129.64552177505 1129.6444299358602 28.713 2 -0.9539528967304685 0.2872902593157551 1.0 ['nc|ENSG00000168356|Q9UI33-3|SCN11A', 'ENSG00000168356|ENST00000302328|SCN11A', 'nc|ENSG00000168356|Q9UI33-2|SCN11A', 'SCN11A|p.V1596Sfs*7|1|0.29|ENSG00000168356|chr3:38847285-38847285|A/-|frameshift_variant', 'SCN11A|p.E1631Kfs*38|1|0.11|ENSG00000168356|chr3:38847179-38847179|C/-|frameshift_variant'] 85843 12875 QMTWTREK True PC9_epitope_Rep4 1078.5229641142198 1078.5218699358602 57.397 2 -0.9539579102600697 0.2872902593157551 1.0 ['ENSG00000113504|ENST00000264930|SLC12A7', 'ENST00000514994.1_1_5:1057584-1063994:-|nuORF'] 57751 10229 LENQTFRFDY True H1975_Epitope_Rep3 1331.61461556959 1331.61350993586 44.394 2 -0.9539813497158681 0.2872902593157551 1.0 ['KIF2A|p.L455Ifs*30|1|0.58|ENSG00000068796|chr5:62363794-62363800|TCTCATT/-|frameshift_variant', 'nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A'] 127803 25505 VRKVGVKR True NCI_RA007_Epitope_Rep3 940.6294182184398 940.6288649679301 110.27 1 -0.954035307919035 0.2872902593157551 1.0 ['ENSG00000149231|ENST00000646818|CCDC82', 'nc|ENSG00000149231|Q8N4S0-2|CCDC82', 'ENST00000530106.1_1_11:96116391-96117917:-|nuORF'] 48042 23381 KALLFILWFT True PC9_epitope_Rep5 1250.74271663518 1250.7410849037901 94.92 3 -0.9540571609518271 0.28729996595165136 1.0 ['Tigger1_dup324|chr1:83019440-83021751:-|3.250534866687885|0.2214501882032552|3.88|499.0|15|1|sense'] 81347 25124 PPRRGGVLLG True NCI_RA007_Epitope_Rep5 1020.6192474575597 1020.61867496793 104.14 1 -0.9541028636792601 0.2873232914771334 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'ENST00000477772.1_1_6:33131457-33145620:-|nuORF'] 24524 18316 FAKLDQKDL True PC9_epitope_Rep3 1076.5866099166 1076.58550993586 75.661 2 -0.9541178698312259 0.287332997398777 1.0 ['EMP2-TERF2|1|fusion', 'ENSG00000132604|ENST00000254942|TERF2'] 117596 14614 VAGRLSVTL True PC9_epitope_Rep2 914.5549158655 914.55380993586 61.482 2 -0.9541250336016506 0.2873427030560549 1.0 ['ENSG00000169951|ENST00000395091|ZNF764', 'nc|ENSG00000169951|Q96H86|ZNF764'] 233 19515 AAGAPNLVLAA True PC9_epitope_Rep3 966.5498304850599 966.54928496793 80.296 1 -0.9541962968204974 0.28736602704653474 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 16130 7539 EEEEREFR True H1975_Epitope_Rep1 1122.4941660837399 1122.4930699358601 33.993 2 -0.9542361288081019 0.2874029688138363 1.0 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 123719 19236 VIQELQDRR True PC9_epitope_Rep4 1155.63601972051 1155.63492993586 82.091 2 -0.9542611664417157 0.28743990957497517 1.0 ['ENST00000373672.7_1_1:32120449-32122662:-|nuORF'] 90294 6946 RHTFQYRVWHF True NCI_RA007_Epitope_Rep2 1575.78474964287 1575.78310490379 31.638 3 -0.9543035356756998 0.28744569880026694 1.0 ['nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 14636 17237 DVLYVFVRVR True NCI_RA007_Epitope_Rep5 1264.72919182936 1264.72808993586 73.075 2 -0.954305254500092 0.28744569880026694 1.0 ['nc|ENSG00000129116|Q8WX93-6|PALLD'] 83324 23433 QALLFIKRM True PC9_epitope_Rep2 1118.66342076866 1118.66232993586 95.609 2 -0.9543194992112373 0.28745148771021994 1.0 ['ENSG00000125755|ENST00000245934|SYMPK'] 112531 13287 TPAFVWPSL True PC9_epitope_Rep1 1016.5331177917599 1016.53202993586 55.972 2 -0.9543568701164212 0.28745148771021994 1.0 ['ENST00000488800.5_1_14:23284579-23292527:-|nuORF'] 140184 11332 YVTVMQNNPL True PC9_epitope_Rep5 1177.58014463717 1177.5784949037902 48.584 3 -0.9543666973222962 0.2874708934188488 1.0 ['ENSG00000158092|ENST00000481752|NCK1', 'nc|ENSG00000158092|P16333-2|NCK1', 'NCK1-IL20RB|3|fusion', 'ENST00000482071.1_1_3:136664576-136665812:+|nuORF', 'NCK1-IL20RB|2|fusion'] 53980 23183 KYKWYLKKLVF True PC9_epitope_Rep4 1514.9013425348996 1514.89969490379 97.402 3 -0.9543695799590549 0.2874708934188488 1.0 ['ENSG00000174992|ENST00000400752|ZG16'] 31470 9968 GEEIPTQK True H1975_Epitope_Rep1 900.45526139388 900.45416993586 43.278 2 -0.9543931885017899 0.2874725992892834 1.0 ['ENST00000544307.1_1_12:20725060-20833202:+|nuORF', 'ENSG00000172572|ENST00000359062|PDE3A'] 38975 20703 HIYWWIPM True PC9_epitope_Rep5 1144.55280769052 1144.5517099358601 84.691 2 -0.9544037076993405 0.2874725992892834 1.0 ['ENST00000513654.5_1_4:122728758-122731165:+|nuORF'] 43232 7438 IGYRLMGK True H1975_Epitope_Rep3 936.5215075622399 936.52040993586 33.588 2 -0.9544169860776343 0.2874725992892834 1.0 ['ENSG00000122729|ENST00000309951|ACO1'] 59076 8981 LGDRPKVRLWR True NCI_RA007_Epitope_Rep2 1394.82588617886 1394.82478993586 39.544 2 -0.9544636726898098 0.2874725992892834 1.0 ['ENST00000515695.1_1_4:1976514-1977301:+|nuORF'] 43080 16977 IGKIFKPWKWR True NCI_RA007_Epitope_Rep3 1457.8659600856897 1457.86432490379 74.642 3 -0.9544835747920234 0.2874725992892834 1.0 ['nc|ENSG00000112419|O75167-5|PHACTR2', 'nc|ENSG00000112419|O75167-2|PHACTR2', 'nc|ENSG00000112419|O75167|PHACTR2', 'ENSG00000112419|ENST00000440869|PHACTR2', 'ENST00000545919.1_1_6:143999315-144033340:+|nuORF', 'ENST00000402863.3_1_6:143999267-144075081:+|nuORF'] 78226 19658 PAPTLLKMT True PC9_epitope_Rep6 970.55213898418 970.55104993586 88.273 2 -0.9545711923150461 0.2874725992892834 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 58263 11035 LETAMHVKEK True PC9_epitope_Rep2 1184.62234380232 1184.62124993586 47.765 2 -0.9545784480300098 0.2874725992892834 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 37330 12839 GVVTSHLSV True PC9_epitope_Rep5 897.4919812557699 897.49088993586 54.395 2 -0.9545811102703322 0.2874725992892834 1.0 ['ENST00000480456.5_1_21:27087792-27087933:+|nuORF'] 111731 11802 TLQAMDEKLR True NCI_RA007_Epitope_Rep5 1203.62815745875 1203.6270699358602 52.055 2 -0.9545897880022589 0.2874725992892834 1.0 ['ENST00000462722.5_1_9:131595865-131599118:-|nuORF', 'nc|ENSG00000286112|Q16773-2|KYAT1', 'ENSG00000171097|ENST00000302586|KYAT1'] 65992 6695 LSLTAVEK True H1975_Epitope_Rep3 859.50148331031 859.50038993586 30.708 2 -0.954599461218134 0.2874725992892834 1.0 ['NUP155|p.A937V|2|0.34|ENSG00000113569|chr5:37307390-37307390|G/A|missense_variant'] 78320 5255 PASPATAAP True PC9_epitope_Rep6 781.39701824177 781.39592993586 27.998 2 -0.9546304319261627 0.28748025921690357 1.0 ['ENSG00000183770|ENST00000648323|FOXL2'] 32857 19709 GIIPGLVVE True PC9_epitope_Rep6 895.53786881903 895.5373249679301 88.467 1 -0.9547014422115551 0.28748025921690357 1.0 ['ENST00000368072.9_1_1:160247107-160247371:-|nuORF'] 69244 10093 LVNPVQEL True PC9_epitope_Rep5 910.51238234718 910.51128993586 43.805 2 -0.95473045248217 0.28748025921690357 1.0 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1', 'ENST00000462441.1_1_2:63101526-63108832:+|nuORF', 'EHBP1-COMMD1|5|fusion', 'EHBP1-COMMD1|6|fusion', 'EHBP1-VAV2|2|fusion', 'EHBP1-VAV2|4|fusion', 'EHBP1-VAV2|1|fusion', 'EHBP1-VAV2|3|fusion'] 97470 14867 SGKAKTKA True NCI_RA007_Epitope_Rep4 789.4708518883699 789.46974993586 64.649 2 -0.9547481367431117 0.28748025921690357 1.0 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'ENST00000527366.1_1_4:100870515-100871327:-|nuORF', 'ENST00000511348.1_1_4:100870606-100871327:-|nuORF', 'ENST00000511203.1_1_4:100870606-100870912:-|nuORF'] 22354 6416 ETELYDYYYYK True H1975_Epitope_Rep1 1548.66604200576 1548.66439490379 29.738 3 -0.9547721943207161 0.28748025921690357 1.0 ['COL24A1|p.E476K|1|0.55|ENSG00000171502|chr1:86124910-86124910|C/T|missense_variant'] 18634 11344 ELANIGLA True H1975_Epitope_Rep2 799.44396843419 799.44341496793 48.683 1 -0.9547801431404803 0.2875015315082293 1.0 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant', 'COL6A3|p.F2599Lfs*26|1|0.14|ENSG00000163359|chr2:237341119-237341119|A/-|frameshift_variant', 'nc|ENSG00000163359|P12111-5|COL6A3', 'COL6A3|p.T1585Pfs*21|1|0.1|ENSG00000163359|chr2:237368711-237368711|C/-|frameshift_variant', 'COL6A3|p.V1662Cfs*3|1|0.3|ENSG00000163359|chr2:237367203-237367204|-/A|frameshift_variant', 'nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3'] 46341 14069 ITGAFPPS True H1975_Epitope_Rep2 788.40685464948 788.40630496793 59.268 1 -0.9548054047014579 0.2875015315082293 1.0 ['ENST00000415522.1_1_X:22454332-22454536:+|nuORF'] 11456 16767 DFVLEYPKPV True H1975_Epitope_Rep3 1205.6332257558502 1205.6321299358601 70.037 2 -0.9548061924174899 0.2875015315082293 1.0 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000244122|Q9HAW7-2|UGT1A7'] 17612 21894 EHMKKMMKD True PC9_epitope_Rep6 1176.5453564349198 1176.54370490379 97.117 3 -0.9548179660285666 0.2875015315082293 1.0 ['nc|ENSG00000167323|Q13586-2|STIM1', 'nc|ENSG00000167323|Q13586|STIM1', 'ENSG00000167323|ENST00000526596|STIM1', 'ENST00000533445.1_1_11:4076769-4103426:+|nuORF'] 63739 8504 LPRLERELKQ True NCI_RA007_Epitope_Rep4 1280.75646920636 1280.75536993586 39.511 2 -0.9548186750187844 0.2875015315082293 1.0 ['nc|ENSG00000002822|Q9Y6D9-3|MAD1L1', 'nc|ENSG00000002822|Q9Y6D9-4|MAD1L1', 'ENSG00000002822|ENST00000265854|MAD1L1', 'ENST00000469871.1_1_7:2249647-2255919:-|nuORF'] 83933 22860 QEKRKLSV True PC9_epitope_Rep2 986.5872786229398 986.58618993586 93.419 2 -0.9548733705803087 0.28750340321263274 1.0 ['ENSG00000197798|ENST00000533050|FAM118B'] 64956 4065 LSCRWWTCWFR True NCI_RA007_Epitope_Rep1 1542.7012799126999 1542.6996449037902 19.867 3 -0.9548962246813382 0.28750340321263274 1.0 ['ENST00000569069.1_1_15:75658861-75660070:-|nuORF'] 12258 4747 DIRPDFGSWTA True H1975_Epitope_Rep3 1263.58840082175 1263.58730993586 23.386 2 -0.9549010592607937 0.28750340321263274 1.0 ['ENSG00000185220|ENST00000329291|PGBD2'] 88176 16251 QWTSRKRK True NCI_RA007_Epitope_Rep5 1088.6203100867199 1088.61920993586 69.263 2 -0.9549712881771931 0.2875403275207253 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 80347 10603 PLGEIQLNK True NCI_RA007_Epitope_Rep3 1010.5760452329 1010.57494993586 48.757 2 -0.9550638006419947 0.28756159311790486 1.0 ['nc|ENSG00000140527|Q6P2C0-2|WDR93', 'ENSG00000140527|ENST00000268130|WDR93'] 66956 8206 LSYRYRYQRRS True NCI_RA007_Epitope_Rep1 1546.8116926666999 1546.8105899358602 35.918 2 -0.9550715978836591 0.28756159311790486 1.0 ['CACNG2|p.P227L|1|0.25|ENSG00000166862|chr22:36564643-36564643|G/A|missense_variant'] 53170 10415 KSRTRWIHSQI True NCI_RA007_Epitope_Rep5 1410.7844152896998 1410.7833099358602 46.689 2 -0.955077850311107 0.28756159311790486 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|56|2|sense'] 121346 6838 VGHRQHQL True PC9_epitope_Rep4 973.52059604545 973.51948993586 33.524 2 -0.9551165399095811 0.28756159311790486 1.0 ['ENST00000261609.11_1_15:28465605-28465737:-|nuORF'] 81664 607 PRSSSLWIELC True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 3.4539 3 -0.955120509633093 0.28756159311790486 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 17629 8362 EHNNEKYV True PC9_epitope_Rep3 1031.4672230599099 1031.4661299358602 37.133 2 -0.9551345039160168 0.28757707332344257 1.0 ['nc|ENSG00000215018|Q2UY09-3|COL28A1'] 126931 19866 VPVFIPLE True PC9_epitope_Rep1 912.5320551625998 912.53150496793 81.233 1 -0.9551413312349011 0.28757707332344257 1.0 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF'] 108001 6483 TDAETGKNAEV True NCI_RA007_Epitope_Rep1 1133.52004647841 1133.51894993586 29.237 2 -0.9551557496141899 0.28757707332344257 1.0 ['CDH10|p.D297E|1|0.17|ENSG00000040731|chr5:24511438-24511438|G/T|missense_variant'] 68003 17683 LTLYGERI True PC9_epitope_Rep5 963.5389314481899 963.53782993586 73.032 2 -0.955251123234413 0.28761399210562133 1.0 ['ENSG00000134569|ENST00000378623|LRP4', 'LRP4|p.W963Cfs*12|1|0.19|ENSG00000134569|chr11:46879241-46879241|C/-|frameshift_variant'] 48674 16698 KELFQEGTSS True PC9_epitope_Rep1 1124.5349682665599 1124.5338699358601 69.057 2 -0.9553630489438315 0.28768782665505227 1.0 ['ENSG00000198173|ENST00000358047|FAM47C', 'FAM47C|p.L824Q|1|0.28|ENSG00000198173|chrX:37010881-37010881|T/A|missense_variant'] 133761 4772 WLLRQKEQLQQ True PC9_epitope_Rep5 1468.81504671164 1468.81339490379 23.401 3 -0.9553753098872844 0.28768782665505227 1.0 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2', 'nc|ENSG00000149930|Q9UL54-2|TAOK2', 'nc|ENSG00000149930|Q9UL54-4|TAOK2'] 11273 5421 DERRTVIIHDR True PC9_epitope_Rep1 1408.7535090842398 1408.7518649037902 25.685 3 -0.9554229023425101 0.28769752153852435 1.0 ['ENSG00000137776|ENST00000380516|SLTM', 'nc|ENSG00000137776|Q9NWH9-3|SLTM'] 101373 2398 SMQQLEQWIK True NCI_RA007_Epitope_Rep4 1289.64380752289 1289.64217490379 13.488 3 -0.9554439609284937 0.28770721615809675 1.0 ['ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5', 'PLEKHA5-AEBP2|4|fusion', 'PLEKHA5-AEBP2|2|fusion', 'PLEKHA5-AEBP2|3|fusion', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'PLEKHA5-AEBP2|10|fusion', 'PLEKHA5-AEBP2|8|fusion', 'PLEKHA5-AEBP2|9|fusion', 'PLEKHA5-AEBP2|7|fusion', 'PLEKHA5-AEBP2|6|fusion', 'PLEKHA5-AEBP2|5|fusion', 'PLEKHA5-AEBP2|12|fusion', 'PLEKHA5-AEBP2|11|fusion', 'PLEKHA5-AEBP2|1|fusion'] 111961 6067 TLSESMQLDR True NCI_RA007_Epitope_Rep2 1178.5601374685798 1178.55904993586 28.205 2 -0.9554686319782217 0.2877305205852331 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3'] 57477 11269 LEKEYFSKNKK True NCI_RA007_Epitope_Rep1 1412.7663651837195 1412.76526993586 47.815 2 -0.9555153145579021 0.2877323824818313 1.0 ['nc|ENSG00000164989|Q6TFL3-3|CCDC171', 'ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'CCDC171|p.F646Lfs*22|1|0.29|ENSG00000164989|chr9:15729683-15729683|C/-|frameshift_variant'] 59325 7960 LGIQKRFSP True H1975_Epitope_Rep1 1044.60801406752 1044.6069099358601 35.567 2 -0.9555418300118774 0.2877323824818313 1.0 ['ENSG00000174851|ENST00000376901|YIF1A'] 81549 8600 PRDYSPEL True PC9_epitope_Rep6 975.4661604307499 975.46506993586 42.888 2 -0.9555812669999502 0.2877323824818313 1.0 ['nc|ENSG00000114904|P51957-3|NEK4', 'nc|ENSG00000114904|P51957-2|NEK4', 'ENSG00000114904|ENST00000233027|NEK4'] 56888 10425 LEDNRNWYQSM True NCI_RA007_Epitope_Rep1 1454.62486298346 1454.62376993586 44.534 2 -0.95562756781408 0.2877420759672832 1.0 ['nc|ENSG00000184588|Q07343-4|PDE4B', 'nc|ENSG00000184588|Q07343-2|PDE4B', 'nc|ENSG00000184588|Q07343-3|PDE4B', 'ENSG00000184588|ENST00000341517|PDE4B'] 5251 7766 ALQQLEKYKPY True H1975_Epitope_Rep3 1379.74490146315 1379.74380993586 34.857 2 -0.9557272546835777 0.28778868006695607 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 112947 24644 TPRRLTPVPG True PC9_epitope_Rep4 1092.64037682496 1092.63987496793 103.29 1 -0.9557641609487113 0.28778868006695607 1.0 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295', 'nc|ENSG00000166004|Q9C0D2-4|CEP295', 'nc|ENSG00000166004|Q9C0D2-2|CEP295'] 103860 16797 SRKLRRSRHS True NCI_RA007_Epitope_Rep3 1281.7490328404901 1281.7479299358602 73.922 2 -0.9558774046113325 0.2878255899403936 1.0 ['ENST00000520674.5_1_5:141016607-141016847:+|nuORF'] 10981 12972 DCYVDHVL True PC9_epitope_Rep2 962.4167677101799 962.41566993586 55.188 2 -0.9559102459317691 0.2878352816297647 1.0 ['ENST00000610272.1_1_1:179850989-179851172:-|nuORF'] 53494 27663 KVLEKYWLYKI True PC9_epitope_Rep1 1481.86462267301 1481.86297490379 113.39 3 -0.955989340626564 0.28785652079251034 1.0 ['ENST00000512116.5_1_4:123818829-123833766:-|nuORF', 'ENST00000503370.5_1_4:123814355-123833769:-|nuORF'] 4893 9587 ALGIDGLLALR True H1975_Epitope_Rep1 1110.67609362734 1110.6749899358601 41.801 2 -0.9559933530477718 0.28785652079251034 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 64673 18254 LRKKHLKA True NCI_RA007_Epitope_Rep2 992.6607183467199 992.65962993586 75.761 2 -0.9560012487122841 0.28785652079251034 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1'] 73587 4365 NGEDRQDSRR True PC9_epitope_Rep2 1231.56537396139 1231.56373490379 22.141 3 -0.9560054632817362 0.28785652079251034 1.0 ['ENST00000487698.5_2_2:198288691-198299763:-|nuORF'] 132633 12691 VYQEWLEK True NCI_RA007_Epitope_Rep5 1093.5444107514497 1093.5433099358602 55.477 2 -0.9560081464952931 0.28785652079251034 1.0 ['ENSG00000164114|ENST00000311277|MAP9'] 117553 7826 VAGEHSVSGWS True H1975_Epitope_Rep3 1114.50433684462 1114.5032299358602 35.081 2 -0.9560423277463922 0.28786415032724205 1.0 ['UBR4|p.R2914W|1|0.31|ENSG00000127481|chr1:19138173-19138173|G/A|missense_variant'] 83154 8015 PYSIMRSV True PC9_epitope_Rep1 951.48478770035 951.48368993586 35.65 2 -0.9560574080723542 0.28786415032724205 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 26642 8454 FLADVDKLK True H1975_Epitope_Rep3 1047.59644632431 1047.5953499358602 37.503 2 -0.9560706536754341 0.28786415032724205 1.0 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant'] 140921 9963 YYYLFAFIYGL True PC9_epitope_Rep5 1431.7114760765498 1431.70984490379 43.298 3 -0.9561149207889805 0.28786415032724205 1.0 ['ENSG00000253710|ENST00000521508|ALG11'] 10031 7723 AYTTGHWDNYK True NCI_RA007_Epitope_Rep5 1354.59421447818 1354.5931099358602 36.406 2 -0.9561204766855946 0.28786415032724205 1.0 ['nc|ENSG00000163795|Q8N8E2-3|ZNF513', 'nc|ENSG00000163795|Q8N8E2-2|ZNF513', 'ENSG00000163795|ENST00000323703|ZNF513'] 126433 5170 VPLNWLRSRPY True PC9_epitope_Rep5 1399.77245362367 1399.7707949037901 24.905 3 -0.9562083010494684 0.28789713585958226 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 106780 15401 SYFYFITL True PC9_epitope_Rep4 1052.52188440172 1052.5207899358602 67.171 2 -0.9562112726059168 0.28789713585958226 1.0 ['ENSG00000102452|ENST00000251127|NALCN', 'NALCN|p.T426Qfs*10|1|0.31|ENSG00000102452|chr13:101237913-101237913|T/-|frameshift_variant', 'ENST00000497170.5_1_13:101795259-101997694:-|nuORF', 'nc|ENSG00000102452|Q8IZF0-2|NALCN', 'ENST00000470333.1_1_13:101833448-102051507:-|nuORF'] 36504 9267 GVKGAKIK True PC9_epitope_Rep3 799.5279728416699 799.52686993586 40.589 2 -0.9562522459569603 0.2879222846569341 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 59089 11541 LGEASTMVRP True NCI_RA007_Epitope_Rep1 1059.5382798251899 1059.5371899358602 48.859 2 -0.9562613944058271 0.2879222846569341 1.0 ['ENST00000299084.8_1_15:38545205-38545376:+|nuORF'] 5348 12396 ALSWLDEELLC True H1975_Epitope_Rep3 1290.61658971554 1290.61548993586 52.87 2 -0.9562643066692896 0.2879222846569341 1.0 ['nc|ENSG00000125447|Q9NZ52-2|GGA3', 'ENSG00000125447|ENST00000537686|GGA3', 'nc|ENSG00000125447|Q9NZ52-3|GGA3', 'nc|ENSG00000125447|Q9NZ52-4|GGA3'] 123056 20100 VGYSIQKLL True PC9_epitope_Rep5 1019.6015317047498 1019.60042993586 82.361 2 -0.9563214415817604 0.2879222846569341 1.0 ['ENST00000446006.1_1_7:64324607-64324745:+|nuORF'] 100619 8865 SLQPAPAS True PC9_epitope_Rep4 769.39701824177 769.39592993586 41.63 2 -0.9563330662109195 0.2879416606576781 1.0 ['nc|ENSG00000138162|O95359-6|TACC2', 'nc|ENSG00000138162|O95359-1|TACC2'] 93201 24026 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 98.938 2 -0.9563494303707278 0.2879416606576781 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 95538 8754 SAQTHFAA True PC9_epitope_Rep3 831.3875161872298 831.38640993586 38.625 2 -0.9563869909079346 0.2879921634785448 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 85596 23272 QLLVRRLKAGV True PC9_epitope_Rep5 1251.81392451283 1251.81226490379 94.502 3 -0.9564422982053388 0.28802906003836576 1.0 ['ENSG00000123454|ENST00000393056|DBH'] 19939 6662 ELYSFVWFHYP True H1975_Epitope_Rep3 1486.6921376143 1486.69048490379 30.577 3 -0.9566286779278161 0.2880795602960383 1.0 ['ENSG00000169006|ENST00000306928|NTSR2', 'NTSR2|p.L219Wfs*3|1|0.21|ENSG00000169006|chr2:11662213-11662214|GG/A|frameshift_variant'] 58748 19442 LFLLRWRIQ True NCI_RA007_Epitope_Rep5 1243.75534700755 1243.7536949037901 81.671 3 -0.956650480559748 0.28809501135946236 1.0 ['ENST00000410023.5_1_2:102781350-102781467:+|nuORF'] 52451 7634 KPHEFCAAQIP True PC9_epitope_Rep2 1239.6070280913498 1239.6053849037899 34.733 3 -0.9566712109881783 0.28809501135946236 1.0 ['ENST00000587966.2_1_19:334309-344774:-|nuORF'] 30146 7535 FYQWNYRINSI True PC9_epitope_Rep4 1502.7306483813397 1502.72899490379 36.352 3 -0.956692874678281 0.28809501135946236 1.0 ['ENST00000261263.4_1_12:72179453-72179861:+|nuORF'] 63941 12003 LPYATESK True PC9_epitope_Rep1 907.46509780159 907.46400993586 51.032 2 -0.9567434933321475 0.28810469608750067 1.0 ['nc|ENSG00000077942|P23142-2|FBLN1', 'nc|ENSG00000077942|P23142-3|FBLN1', 'nc|ENSG00000077942|P23142-4|FBLN1', 'ENSG00000077942|ENST00000327858|FBLN1'] 71434 8904 MIRGCGGG True NCI_RA007_Epitope_Rep3 749.3312642644099 749.33016993586 42.109 2 -0.9567847999199564 0.28811438055204125 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 66115 12124 LSNTKVLEIP True PC9_epitope_Rep1 1112.6441247927198 1112.64302993586 51.498 2 -0.9568213019459166 0.2881240647530948 1.0 ['nc|ENSG00000131196|O95644-8|NFATC1', 'nc|ENSG00000131196|O95644-11|NFATC1', 'nc|ENSG00000131196|O95644-3|NFATC1', 'nc|ENSG00000131196|O95644-10|NFATC1', 'nc|ENSG00000131196|O95644-2|NFATC1', 'nc|ENSG00000131196|O95644-5|NFATC1', 'nc|ENSG00000131196|O95644-4|NFATC1', 'nc|ENSG00000131196|O95644-6|NFATC1', 'ENSG00000131196|ENST00000427363|NFATC1', 'nc|ENSG00000131196|O95644-17|NFATC1'] 122129 9373 VGRGYASP True PC9_epitope_Rep3 805.4082516318099 805.40714993586 40.992 2 -0.9568587414734917 0.28813374869067215 1.0 ['ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 122713 24630 VGTYWKRLM True PC9_epitope_Rep2 1152.6113851958 1152.61087496793 100.38 1 -0.9569252756874205 0.2881570355860268 1.0 ['ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 107730 5036 TALQAPAVPP True H1975_Epitope_Rep1 963.5389314481898 963.53782993586 24.44 2 -0.956951940898586 0.2881685619456989 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 68240 5608 LTQWQRRYFYL True NCI_RA007_Epitope_Rep2 1572.8201320920798 1572.81847490379 26.43 3 -0.9569712190839985 0.2881685619456989 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000524899.1_1_11:67051750-67052658:+|nuORF', 'ENST00000416281.6_1_11:67049840-67052918:+|nuORF', 'ENSG00000100077|ENST00000324198|GRK3'] 19577 10529 ELREGQGCI True NCI_RA007_Epitope_Rep2 1003.4756795686299 1003.47458993586 45.551 2 -0.9569747848798998 0.2881685619456989 1.0 ['ENST00000502856.5_1_4:15683550-15687914:+|nuORF'] 30375 18545 GAEQLVEILN True PC9_epitope_Rep6 1084.5764391557198 1084.57534993586 83.974 2 -0.9570007921891264 0.2881685619456989 1.0 ['ENSG00000143199|ENST00000367851|ADCY10'] 103357 21591 SQVKPLFQFFV True PC9_epitope_Rep6 1338.73360850346 1338.73195490379 95.926 3 -0.9570996293916401 0.28820152887728173 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 81363 17482 PPSLGLLQRER True NCI_RA007_Epitope_Rep5 1264.7251690780797 1264.7240699358601 74.03 2 -0.9571053346604792 0.28820152887728173 1.0 ['ENST00000562955.2_2_1:43919018-43919642:+|nuORF'] 139624 10306 YTRQERYRARP True PC9_epitope_Rep4 1494.7803925384198 1494.77875490379 47.329 3 -0.9571854903823765 0.28826169749727965 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 120839 8518 VGDNRVVL True PC9_epitope_Rep3 870.4923156089399 870.49120993586 37.722 2 -0.9571957646330789 0.28826169749727965 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.P5041T|1|0.35|ENSG00000117983|chr11:1252884-1252884|C/A|missense_variant'] 131051 10862 VVLNLDTT True NCI_RA007_Epitope_Rep3 873.4807478657301 873.47964993586 49.786 2 -0.9571994558498939 0.2882713782456713 1.0 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 32252 17379 GFLPWEKKK True PC9_epitope_Rep6 1131.64406522307 1131.64296993586 79.464 2 -0.9572702405953071 0.28829466010173826 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB'] 110218 11597 TIEELSAQI True PC9_epitope_Rep3 1002.5233409537 1002.52224993586 49.621 2 -0.9572834680984772 0.28830434013846007 1.0 ['ENST00000427733.1_1_13:90882929-90883235:+|nuORF'] 115068 22135 TTSFAGSS True H1975_Epitope_Rep2 756.3289982516001 756.32790993586 91.489 2 -0.9573290019617666 0.2883140199118655 1.0 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20', 'ENST00000457750.1_1_3:195341833-195346985:+|nuORF'] 41723 10030 IDNLDERLPR True H1975_Epitope_Rep1 1239.65714908791 1239.6560499358602 43.519 2 -0.9574454428557597 0.2883373002380143 1.0 ['ENST00000462786.1_1_X:48564870-48565958:+|nuORF', 'ENST00000482260.1_1_X:48563729-48565958:+|nuORF', 'ENSG00000101945|ENST00000376687|SUV39H1', 'nc|ENSG00000101945|O43463-2|SUV39H1'] 99051 10582 SKTYLDGEGCI True H1975_Epitope_Rep3 1184.5383393948398 1184.53724993586 45.774 2 -0.9574664737470283 0.2883469792998395 1.0 ['ENSG00000077514|ENST00000263681|POLD3', 'nc|ENSG00000077514|Q15054-2|POLD3', 'ENST00000530163.1_1_11:74340223-74351808:+|nuORF', 'nc|ENSG00000077514|Q15054-3|POLD3'] 449 17192 AALTHPKCALQ True PC9_epitope_Rep1 1151.6121134717898 1151.61100993586 70.949 2 -0.9575855849663246 0.28839353715591337 1.0 ['NLRP13|p.E870Q|1|0.24|ENSG00000173572|chr19:55904952-55904952|C/G|missense_variant'] 83159 8248 PYSIMRSV True PC9_epitope_Rep5 951.48478770035 951.48368993586 36.667 2 -0.9576072737590234 0.28839353715591337 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 42263 12820 IEHYGYLPIP True H1975_Epitope_Rep2 1200.6179100448799 1200.6168099358601 54.421 2 -0.9576252407263497 0.28839929280565757 1.0 ['COLGALT2|p.R286I|1|0.07|ENSG00000198756|chr1:183963996-183963996|C/A|missense_variant'] 9159 10772 AVNEKGRSDP True H1975_Epitope_Rep3 1071.53088594563 1071.5297899358602 46.515 2 -0.9576378583374792 0.28839929280565757 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 125011 8074 VLNWKEEEKK True NCI_RA007_Epitope_Rep1 1301.6979512707296 1301.6968499358602 35.404 2 -0.9576494578646384 0.2884089703662401 1.0 ['ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-4|CASP4', 'ENST00000524843.5_1_11:104820261-104839261:-|nuORF', 'CASP4|p.R121Sfs*2|1|0.24|ENSG00000196954|chr11:104951907-104951908|TT/-|frameshift_variant', 'nc|ENSG00000196954|P49662-5|CASP4', 'ENST00000531546.1_1_11:104822523-104839261:-|nuORF', 'ENST00000529183.5_1_11:104820451-104839261:-|nuORF', 'ENST00000531333.5_1_11:104821760-104839261:-|nuORF', 'nc|ENSG00000196954|P49662-3|CASP4', 'ENST00000533730.5_1_11:104822704-104839261:-|nuORF'] 7343 7799 ASAGPVPDLVL True NCI_RA007_Epitope_Rep2 1037.5757108797297 1037.57460993586 34.964 2 -0.9577446878955352 0.28841864766360226 1.0 ['ENST00000464499.5_1_16:70512876-70513152:+|nuORF'] 14773 9299 DWKEIQTLLSH True H1975_Epitope_Rep1 1368.7037649271601 1368.70266993586 40.677 2 -0.957782038092089 0.28842832469775476 1.0 ['nc|ENSG00000087269|P78316-2|NOP14', 'ENSG00000087269|ENST00000416614|NOP14'] 57577 13435 LELERRSQE True PC9_epitope_Rep6 1158.59929985862 1158.59820993586 63.367 2 -0.9578039510335458 0.28843198846870366 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 24886 2496 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 13.186 2 -0.9578302581223553 0.28843198846870366 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 55952 20392 LDHSRFVNCVR True PC9_epitope_Rep1 1344.6720879594002 1344.67098993586 83.259 2 -0.9578353813034483 0.28843198846870366 1.0 ['ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 57702 5043 LENEKRKYDEH True NCI_RA007_Epitope_Rep1 1459.70555583231 1459.70392490379 23.7 3 -0.9578406976541997 0.28843198846870366 1.0 ['nc|ENSG00000186409|Q5VVM6-2|CCDC30', 'nc|ENSG00000186409|Q5VVM6|CCDC30', 'ENSG00000186409|ENST00000657597|CCDC30', 'CCDC30|p.V553Sfs*12|1|0.41|ENSG00000186409|chr1:42637262-42637263|-/A|frameshift_variant'] 66278 7258 LSQERPHRFED True H1975_Epitope_Rep3 1412.6796754376398 1412.6785699358602 32.891 2 -0.957843012216813 0.28843198846870366 1.0 ['ENSG00000235568|ENST00000329021|NFAM1'] 112167 24699 TLVLVVSS True H1975_Epitope_Rep1 816.4956696538801 816.49456993586 102.32 2 -0.9578586811108543 0.28843198846870366 1.0 ['nc|ENSG00000073464|P51793-2|CLCN4', 'ENSG00000073464|ENST00000380833|CLCN4'] 103693 23476 SRDRQKYL True H1975_Epitope_Rep2 1064.57269118796 1064.5715899358602 96.776 2 -0.9578985708304748 0.2884610154741508 1.0 ['nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'ENSG00000197748|ENST00000357060|CFAP43'] 2035 7130 AELDNPMQQK True H1975_Epitope_Rep3 1172.54957278488 1172.54846993586 32.398 2 -0.9579785736522634 0.2884610154741508 1.0 ['ENSG00000172375|ENST00000648610|C2CD2L', 'nc|ENSG00000172375|O14523-2|C2CD2L', 'ENST00000525598.1_1_11:118981556-118982340:+|nuORF', 'ENST00000529874.5_1_11:118980840-118984381:+|nuORF'] 77960 13057 PALARAWCAHP True H1975_Epitope_Rep3 1191.5971321139898 1191.59602993586 55.463 2 -0.9580199830151828 0.2884610154741508 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|364|2|anti-sense'] 9070 4990 AVIWCTWFL True NCI_RA007_Epitope_Rep5 1137.56812340149 1137.56647490379 25.899 3 -0.9581163929608894 0.28849396279778095 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 23088 5306 EVLKSRKYI True NCI_RA007_Epitope_Rep1 1134.67609362734 1134.6744449037901 24.72 3 -0.9581397596614026 0.28849396279778095 1.0 ['ENST00000256707.7_2_2:8870236-8870326:-|nuORF'] 10954 16538 DCDCDCAD True PC9_epitope_Rep6 858.18300491786 858.18190993586 76.053 2 -0.9582483573659683 0.2885444285811408 1.0 ['ENSG00000213139|ENST00000307944|CRYGS'] 117977 11723 VASATKKFSY True PC9_epitope_Rep5 1100.5866099165999 1100.58550993586 50.091 2 -0.9582671153883443 0.2885541021945449 1.0 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 25680 19812 FFFFFFFFKQF True PC9_epitope_Rep5 1597.7798304198893 1597.77817490379 81.254 3 -0.9584588251214808 0.2885967178343689 1.0 ['ENST00000468830.1_1_7:131163282-131172484:+|nuORF'] 131197 23408 VVPIEVLPTV True PC9_epitope_Rep6 1064.648147544 1064.6470499358602 103.15 2 -0.9584613809675173 0.2885967178343689 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 128066 17920 VRRLPGGG True NCI_RA007_Epitope_Rep4 810.4824196315798 810.48132993586 77.552 2 -0.9584761213559103 0.2885967178343689 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 76416 11135 NSSFTLGISP True H1975_Epitope_Rep3 1021.5080252427299 1021.50692993586 47.927 2 -0.958538168026268 0.2886335825968729 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|208|3|anti-sense', 'chr5:53631926-53646233|158|22.7|0.0|15.21|+|2|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|2'] 73122 5909 NEAAPEIW True NCI_RA007_Epitope_Rep1 928.42904664604 928.4279499358599 27.036 2 -0.9585915617308911 0.28863932999782466 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 4983 11525 ALKDVHNYL True NCI_RA007_Epitope_Rep1 1071.57129420563 1071.57018993586 48.797 2 -0.9586056470187998 0.28863932999782466 1.0 ['PFKFB1|p.A402Gfs*6|1|0.34|ENSG00000158571|chrX:54937620-54937621|-/A|frameshift_variant', 'nc|ENSG00000158571|P16118-2|PFKFB1', 'ENSG00000158571|ENST00000375006|PFKFB1'] 16438 14472 EELLRKTK True PC9_epitope_Rep3 1015.6025943339099 1015.60148993586 60.775 2 -0.9586222519281122 0.28864900140035077 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'TTN|p.H3057Ifs*2|2|0.16|ENSG00000155657|chr2:178768151-178768151|A/-|frameshift_variant', 'TTN|p.P2078Qfs*61|1|0.14|ENSG00000155657|chr2:178775631-178775631|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 85178 23614 QKDLKRYKF True NCI_RA007_Epitope_Rep3 1224.69789170108 1224.6967899358601 102.42 2 -0.9586378431993475 0.2886586725399027 1.0 ['ENSG00000215009|ENST00000399422|ACSM4'] 43920 15980 ILEAESKPL True PC9_epitope_Rep5 998.56481184286 998.56370993586 66.458 2 -0.9586520397196988 0.28866834341649106 1.0 ['ENST00000582077.5_1_18:66382817-66385349:+|nuORF'] 32359 1169 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 6.1627 2 -0.9586611644701832 0.2886740894816265 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 140176 17365 YVTMEEYFMR True PC9_epitope_Rep4 1367.58899506871 1367.5878899358602 74.798 2 -0.9586669218450224 0.2886740894816265 1.0 ['GPI-COG4|4|fusion', 'GPI-COG4|3|fusion', 'GPI-COG4|2|fusion', 'GPI-COG4|1|fusion', 'nc|ENSG00000103051|Q9H9E3-3|COG4', 'nc|ENSG00000103051|Q9H9E3|COG4', 'ENSG00000103051|ENST00000323786|COG4', 'ENST00000526700.5_1_16:70530266-70542451:-|nuORF'] 5580 8591 ANSMVLFFK True NCI_RA007_Epitope_Rep2 1055.54738795691 1055.5462899358602 38.062 2 -0.958673367446855 0.28867983523430174 1.0 ['ENSG00000178201|ENST00000321039|VN1R1', 'ENST00000601945.1_1_19:57967019-57967581:-|nuORF'] 90213 20467 RHKRRRRKH True NCI_RA007_Epitope_Rep2 1328.8238695465998 1328.8227699358602 84.683 2 -0.9586807468570296 0.28867983523430174 1.0 ['DVL3|p.Q224H|1|0.1|ENSG00000161202|chr3:184165185-184165185|G/C|missense_variant'] 62982 14812 LNELWNKYRER True NCI_RA007_Epitope_Rep1 1519.78956023979 1519.7884699358601 61.675 2 -0.9587299174782767 0.2887009950519276 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'nc|ENSG00000116127|Q8TCU4-3|ALMS1'] 86039 5977 QPLGYPIYVSP True NCI_RA007_Epitope_Rep2 1232.64412479272 1232.6424749037901 27.858 3 -0.9588053883493943 0.2887009950519276 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 32400 25852 GGGGGCCCG True H1975_Epitope_Rep3 669.16690136125 669.16635496793 107.62 1 -0.9588367972975163 0.2887009950519276 1.0 ['ENST00000431489.5_1_2:62932928-62934072:+|nuORF'] 48614 12026 KEIFHERDPFS True NCI_RA007_Epitope_Rep5 1403.68336383575 1403.6822699358602 52.919 2 -0.9588378448405674 0.2887009950519276 1.0 ['ENSG00000172404|ENST00000307221|DNAJB7'] 66194 13327 LSPLLEPPEF True H1975_Epitope_Rep2 1140.60667665484 1140.60556993586 56.392 2 -0.9588571505993063 0.2887009950519276 1.0 ['ENST00000241527.10_1_2:242028119-242028287:-|nuORF'] 126710 20002 VPRPVVLAL True PC9_epitope_Rep5 962.6276868829399 962.62658993586 81.991 2 -0.9588863625628038 0.2887067395264117 1.0 ['ENST00000455809.5_1_3:11888137-11888176:-|nuORF'] 131072 25401 VVLTPSVLTV True PC9_epitope_Rep2 1026.63249747986 1026.6314099358601 103.39 2 -0.9588868344444627 0.2887067395264117 1.0 ['ENST00000414082.1_3_20:33292571-33293222:+|nuORF'] 4189 6285 AIDILDRSSSM True NCI_RA007_Epitope_Rep2 1206.59143759686 1206.5897849037901 29.054 3 -0.958919944852365 0.28871248368856023 1.0 ['ENSG00000198909|ENST00000361733|MAP3K3', 'nc|ENSG00000198909|Q99759-2|MAP3K3'] 110667 6599 TIWFYKESYLR True NCI_RA007_Epitope_Rep2 1504.77145056416 1504.76980490379 30.277 3 -0.9589366486758548 0.28871248368856023 1.0 ['nc|ENSG00000138892|A6PVC2|TTLL8', 'ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 25042 15692 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 65.367 2 -0.9589507467863625 0.28873574467506696 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 100223 5431 SLLNDAVTV True PC9_epitope_Rep6 930.5022115863 930.50110993586 28.804 2 -0.9589586047395483 0.2887414878144921 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3', 'ENSG00000066230|ENST00000264938|SLC9A3', 'ENST00000564812.5_1_16:67286693-67289803:+|nuORF', 'ENST00000564704.5_1_16:67272241-67289541:+|nuORF', 'ENSG00000135740|ENST00000299798|SLC9A5', 'ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 67044 11816 LTARFMMGP True H1975_Epitope_Rep1 1022.5041432459399 1022.5030499358601 50.446 2 -0.9590015507767432 0.2887414878144921 1.0 ['ENST00000443950.6_1_10:43883130-43883238:-|nuORF'] 114562 10351 TSKFGHVFYF True PC9_epitope_Rep5 1231.6025943339098 1231.60093490379 44.8 3 -0.9590557553328954 0.28876082258437197 1.0 ['ENSG00000205784|ENST00000650722|ARRDC5', 'nc|ENSG00000205784|A6NEK1|ARRDC5'] 69281 10519 LVPELQAT True PC9_epitope_Rep1 869.4858332461699 869.48472993586 45.352 2 -0.9590714167439025 0.28876082258437197 1.0 ['ENSG00000165934|ENST00000298875|CPSF2'] 58578 15841 LFELEIEALP True PC9_epitope_Rep1 1172.63289140268 1172.63125490379 65.747 3 -0.9591525204856074 0.2887976730910376 1.0 ['ENSG00000204209|ENST00000374542|DAXX', 'nc|ENSG00000204209|Q9UER7-3|DAXX', 'nc|ENSG00000204209|Q9UER7-5|DAXX', 'nc|ENSG00000204209|Q9UER7-4|DAXX', 'nc|ENSG00000204209|Q9UER7-2|DAXX'] 95541 8682 SAQTHFAA True PC9_epitope_Rep5 831.3875161872298 831.38640993586 38.337 2 -0.9592739224381882 0.28883241142173716 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 108192 17351 TDVVTVTDSL True PC9_epitope_Rep4 1048.52882025696 1048.5277299358602 74.744 2 -0.9593268262041152 0.28883241142173716 1.0 ['ENST00000581519.5_3_17:73455820-73467945:+|nuORF'] 112064 20744 TLTGMQPLHTF True PC9_epitope_Rep1 1244.6223438023196 1244.62124993586 84.62 2 -0.9593518112634892 0.28883241142173716 1.0 ['ENSG00000146938|ENST00000381095|NLGN4X', 'nc|ENSG00000146938|Q8N0W4-2|NLGN4X'] 128766 8643 VSQKVLPP True PC9_epitope_Rep6 866.5225531080598 866.52144993586 43.067 2 -0.959359608667962 0.28883241142173716 1.0 ['ENST00000413631.1_1_13:111590511-111591024:+|nuORF'] 59044 14246 LGAYLPRRNR True PC9_epitope_Rep3 1214.6996230365799 1214.69797490379 59.884 3 -0.9593705295071122 0.28883241142173716 1.0 ['ENST00000369776.8_1_X:153640293-153648389:+|nuORF'] 70961 17200 MENLQQDYELK True PC9_epitope_Rep6 1409.64968074897 1409.6485899358602 78.748 2 -0.9594693421020176 0.28888466085916586 1.0 ['ENSG00000103494|ENST00000647211|RPGRIP1L', 'nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 19284 11386 ELLRLRDRHGK True H1975_Epitope_Rep1 1391.8109643907098 1391.8098699358602 48.775 2 -0.9594714162335323 0.28888466085916586 1.0 ['ENSG00000162396|ENST00000371279|PARS2'] 12840 11651 DLKRLNVP True PC9_epitope_Rep3 953.5658149023699 953.56470993586 49.834 2 -0.9594739197148769 0.28888466085916586 1.0 ['nc|ENSG00000054796|Q9Y5K1-2|SPO11', 'ENSG00000054796|ENST00000371263|SPO11'] 32823 5394 GIGHVAGF True NCI_RA007_Epitope_Rep5 756.3918732916799 756.39076993586 27.438 2 -0.9594804901057824 0.28888466085916586 1.0 ['ENST00000489430.1_1_1:228296601-228296928:-|nuORF'] 109144 12340 TFLSQQEELR True NCI_RA007_Epitope_Rep5 1249.6302656337298 1249.62916993586 54.115 2 -0.9595956360740666 0.2889079147640791 1.0 ['ENST00000523856.5_1_5:141026049-141027048:-|nuORF'] 111207 17936 TLFRGKVP True PC9_epitope_Rep3 916.5494365622399 916.54832993586 74.194 2 -0.9596202575813698 0.28891757831079706 1.0 ['ENSG00000110536|ENST00000326674|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-2|PTPMT1', 'nc|ENSG00000110536|Q8WUK0-3|PTPMT1'] 136047 20903 YFSVAHFS True NCI_RA007_Epitope_Rep5 956.43921740692 956.43812993586 87.4 2 -0.959671585102022 0.28893478822138574 1.0 ['ENST00000216024.6_1_22:38964257-38966082:-|nuORF'] 98275 9411 SIFFCIYVVE True H1975_Epitope_Rep1 1218.5994830994198 1218.59838993586 41.111 2 -0.9596815318695416 0.28893478822138574 1.0 ['ENSG00000175294|ENST00000312106|CATSPER1'] 82696 20479 PVPEEMPLFL True PC9_epitope_Rep3 1170.5994830994198 1170.59838993586 84.031 2 -0.959704414982211 0.28893478822138574 1.0 ['nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2'] 24885 2373 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 12.514 2 -0.9597094062333368 0.28893478822138574 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 101496 11769 SNYSVSLVGP True NCI_RA007_Epitope_Rep1 1021.5080252427299 1021.50692993586 49.756 2 -0.95971045403244 0.28893478822138574 1.0 ['ENST00000511767.3_1_4:95376439-95471092:+|nuORF', 'PDLIM5|p.G15Ffs*7|1|0.11|ENSG00000163110|chr4:94455329-94455330|GG/-|frameshift_variant', 'ENST00000509333.5_1_4:95376439-95494553:+|nuORF', 'ENST00000514830.5_1_4:95376439-95503710:+|nuORF', 'nc|ENSG00000163110|Q96HC4-5|PDLIM5', 'ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 128420 14978 VSEEHNLLP True PC9_epitope_Rep4 1036.5189242795998 1036.5178299358602 65.551 2 -0.9597150577775356 0.28893478822138574 1.0 ['POLD2|p.T192Rfs*2|1|0.17|ENSG00000106628|chr7:44117138-44117139|TG/-|frameshift_variant', 'ENST00000470867.5_1_7:44156819-44163110:-|nuORF', 'ENST00000463464.5_1_7:44156730-44161694:-|nuORF', 'ENSG00000106628|ENST00000610533|POLD2', 'ENST00000461116.1_1_7:44157158-44161472:-|nuORF'] 98732 12571 SIRRWAYQMFR True H1975_Epitope_Rep3 1512.7772217342797 1512.7761299358601 53.556 2 -0.9598188123963661 0.28893810119015273 1.0 ['ACACB|p.E285Q|1|0.24|ENSG00000076555|chr12:109167962-109167962|G/C|missense_variant'] 91029 18088 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 75.111 2 -0.9598190545708202 0.28893810119015273 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 47070 5759 IVTTSNNHI True PC9_epitope_Rep5 997.5192586327701 997.51816993586 27.146 2 -0.9598357614070435 0.28893810119015273 1.0 ['nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'ENST00000442459.2_1_1:16342077-16343748:-|nuORF'] 131478 23250 VVTVIIII True PC9_epitope_Rep6 868.5997407995999 868.59864993586 102.53 2 -0.9598727870270414 0.28893810119015273 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 13629 19399 DPTPKLFALR True PC9_epitope_Rep5 1156.6604435631998 1156.65934993586 79.664 2 -0.9599139848763757 0.28893810119015273 1.0 ['nc|ENSG00000163521|Q6UWU2-2|GLB1L', 'ENSG00000163521|ENST00000295759|GLB1L'] 103294 6493 SQTQMLDSNLQ True H1975_Epitope_Rep3 1263.5765158087102 1263.57540993586 29.945 2 -0.9599358957100025 0.28893810119015273 1.0 ['CLEC4F|p.W538Sfs*51|1|0.2|ENSG00000152672|chr2:70809783-70809784|CC/-|frameshift_variant', 'nc|ENSG00000152672|Q8N1N0-2|CLEC4F', 'ENSG00000152672|ENST00000272367|CLEC4F'] 134710 10149 WWRRRWTRSQW True H1975_Epitope_Rep1 1702.8705449554998 1702.86889490379 43.976 3 -0.959938339946352 0.28893810119015273 1.0 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 91027 17913 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 74.415 2 -0.9599647185747456 0.28893810119015273 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 20654 15553 EQHGEFQYF True H1975_Epitope_Rep2 1183.4934378077498 1183.49179490379 64.98 3 -0.9599681480643077 0.28893810119015273 1.0 ['ENST00000487009.5_1_1:222753140-222761905:-|nuORF'] 135481 6299 YEDESRKETNK True NCI_RA007_Epitope_Rep2 1397.6422868694096 1397.6411899358602 29.108 2 -0.9599857541465358 0.28893810119015273 1.0 ['nc|ENSG00000177119|Q4KMQ2-4|ANO6', 'nc|ENSG00000177119|Q4KMQ2-3|ANO6', 'ENSG00000177119|ENST00000320560|ANO6', 'nc|ENSG00000177119|Q4KMQ2-2|ANO6', 'ENST00000426898.2_1_12:45610123-45776982:+|nuORF'] 129524 13534 VTFPDLGP True PC9_epitope_Rep3 844.4330693973199 844.43196993586 57.112 2 -0.9600205843399828 0.28893810119015273 1.0 ['CON__ENSEMBL:ENSBTAP00000016285'] 91026 17810 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 74.017 2 -0.9600480149448064 0.28893810119015273 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 79600 15009 PGVTFKLLL True NCI_RA007_Epitope_Rep5 986.6164534928998 986.61534993586 64.401 2 -0.9601139551633251 0.28893810119015273 1.0 ['ENST00000361246.6_1_14:103432671-103433458:-|nuORF'] 36200 12332 GVFTDIPISNI True PC9_epitope_Rep3 1174.6233893481399 1174.6217549037901 52.463 3 -0.9601844590275451 0.2889477617009714 1.0 ['ENST00000533297.1_1_11:111896132-111933256:+|nuORF', 'ENSG00000150768|ENST00000280346|DLAT'] 109316 13356 TGGGGGGD True NCI_RA007_Epitope_Rep3 576.21396849936 576.2134249679301 59.799 1 -0.9602441121781911 0.28895742194929763 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 126061 20833 VPAVLFTTL True PC9_epitope_Rep4 959.5691689473101 959.56806993586 88.286 2 -0.9602503735956471 0.28898066759954893 1.0 ['nc|ENSG00000159140|P18583-4|SON'] 114999 17690 TTKVLTTTT True H1975_Epitope_Rep1 964.54407639828 964.54296993586 73.629 2 -0.9602674105415612 0.2889999864147047 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S3673Afs*24|1|0.28|ENSG00000117983|chr11:1247893-1247893|C/-|frameshift_variant'] 52940 1138 KRKRRKKKGH True H1975_Epitope_Rep1 1320.86908840352 1320.8674349037901 5.9381 3 -0.9602861720284054 0.2889999864147047 1.0 ['nc|ENSG00000185404|Q9H930-1|SP140L', 'nc|ENSG00000185404|Q9H930-2|SP140L', 'ENSG00000185404|ENST00000415673|SP140L'] 102 7536 AAASGAKCVLT True H1975_Epitope_Rep3 990.5168161046199 990.51570993586 33.969 2 -0.9602957745435309 0.2890017931858936 1.0 ['IMPA2|p.L193Cfs*11|1|0.44|ENSG00000141401|chr18:12028127-12028127|G/-|frameshift_variant', 'ZNF519-IMPA2|1|fusion', 'nc|ENSG00000141401|O14732-2|IMPA2', 'ENSG00000141401|ENST00000269159|IMPA2', 'ENST00000383376.9_1_18:12008408-12017827:+|nuORF', 'ENST00000588863.1_1_18:11999160-12009987:+|nuORF'] 124526 9965 VLGAALAA True H1975_Epitope_Rep1 684.41702541036 684.4164749679301 43.267 1 -0.9603512369601045 0.2890017931858936 1.0 ['nc|ENSG00000260001|H3BV60|TGFBR3L', 'nc|ENSG00000120697|Q9Y673-2|ALG5', 'ENSG00000260001|ENST00000565886|TGFBR3L', 'ENSG00000120697|ENST00000239891|ALG5'] 26903 12091 FLGFFMVP True PC9_epitope_Rep3 956.4829967951999 956.48188993586 51.55 2 -0.9603699363922303 0.2890017931858936 1.0 ['ENSG00000174231|ENST00000304992|PRPF8', 'PITPNA-PRPF8|1|fusion', 'PITPNA-PRPF8|2|fusion'] 17865 13139 EICDRIKEEF True PC9_epitope_Rep5 1280.607087661 1280.6059899358602 55.543 2 -0.9604344181727279 0.2890211101149238 1.0 ['ENSG00000065717|ENST00000262953|TLE2', 'nc|ENSG00000065717|Q04725-3|TLE2'] 12012 5594 DIAWWYYQYQR True H1975_Epitope_Rep1 1590.7255630009001 1590.72446993586 26.584 2 -0.9604353071488756 0.2890211101149238 1.0 ['nc|ENSG00000182132|Q9NZI2|KCNIP1'] 103864 23063 SRKSRVGK True PC9_epitope_Rep2 916.5566472009998 916.55554993586 94.203 2 -0.9604543987978027 0.2890422309458156 1.0 ['ENST00000395442.5_1_10:55568369-55568990:-|nuORF'] 108862 18121 TERKRRHA True NCI_RA007_Epitope_Rep5 1052.59515796804 1052.59457496793 76.506 1 -0.9605417413298613 0.2890422309458156 1.0 ['nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 82670 18114 PVMEGDLMQL True PC9_epitope_Rep3 1131.5304175634299 1131.52930993586 74.872 2 -0.9605614062501924 0.2890422309458156 1.0 ['nc|ENSG00000175161|Q8N3J6-4|CADM2', 'nc|ENSG00000175161|Q8N3J6-5|CADM2', 'ENSG00000175161|ENST00000383699|CADM2', 'nc|ENSG00000175161|Q8N3J6|CADM2', 'nc|ENSG00000175161|Q8N3J6-3|CADM2'] 64262 13904 LQLDRISVYY True H1975_Epitope_Rep2 1268.67648755016 1268.67538993586 58.629 2 -0.9605785135861662 0.2890422309458156 1.0 ['ENSG00000196230|ENST00000327892|TUBB', 'ENST00000518096.1_1_8:30209523-30210210:+|nuORF'] 28202 2256 FRRCWLVFK True NCI_RA007_Epitope_Rep1 1253.6855531955696 1253.68390490379 11.867 3 -0.960594775156259 0.2890422309458156 1.0 ['ENSG00000206052|ENST00000382713|DOK6'] 124339 19375 VLDRESLYTK True H1975_Epitope_Rep3 1222.65575210558 1222.65464993586 81.211 2 -0.9606091363995297 0.2890440357501834 1.0 ['nc|ENSG00000179242|P55283-2|CDH4', 'ENSG00000179242|ENST00000614565|CDH4'] 59035 11537 LGASGRCG True NCI_RA007_Epitope_Rep1 719.33845781983 719.3379049679301 48.844 1 -0.9606095381772034 0.2890440357501834 1.0 ['ENST00000379942.4_1_X:18970652-19002067:-|nuORF'] 18393 9637 EKAVAKYL True H1975_Epitope_Rep2 920.5331177917599 920.53202993586 42.047 2 -0.9606364648113117 0.2890440357501834 1.0 ['ENSG00000008952|ENST00000337002|SEC62'] 90820 23132 RKSSKLIKK True NCI_RA007_Epitope_Rep2 1086.7237125261 1086.7226099358602 96.596 2 -0.9606703081480179 0.2890536924602366 1.0 ['nc|ENSG00000156510|Q2TB90-3|HKDC1'] 99903 11835 SLHVPPETLG True PC9_epitope_Rep4 1048.5553097883198 1048.5542099358602 53.295 2 -0.9606814178798129 0.2890554966995355 1.0 ['ENSG00000150048|ENST00000315330|CLEC1A'] 18676 11250 ELCWEYYDY True H1975_Epitope_Rep2 1282.48524119282 1282.4841499358602 48.317 2 -0.9607278151242461 0.2890554966995355 1.0 ['UGT2B15|p.P288Tfs*4|2|0.14|ENSG00000196620|chr4:68668051-68668052|-/T|frameshift_variant', 'ENSG00000196620|ENST00000338206|UGT2B15'] 125289 14153 VLRRQRRSWFM True PC9_epitope_Rep2 1533.8463043536096 1533.84466490379 59.709 3 -0.9607428908943622 0.2890554966995355 1.0 ['chr5:1801664-1802321|231|22.96|0.0|21.13|+|1|None,NDUFS6|1'] 109320 13810 TGGGGGGD True NCI_RA007_Epitope_Rep5 576.21396849936 576.2134249679301 59.795 1 -0.960779618585754 0.28906515272929767 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 140911 8833 YYVYTQQELKE True H1975_Epitope_Rep3 1462.6980108403798 1462.69690993586 38.982 2 -0.960808594824177 0.28907480849676753 1.0 ['ENSG00000147459|ENST00000276440|DOCK5', 'ENST00000467709.6_1_8:25227083-25246387:+|nuORF'] 12586 4745 DLDSLVTPP True H1975_Epitope_Rep3 955.48622716899 955.48512993586 23.378 2 -0.9608931912663837 0.2891387904222521 1.0 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant'] 131363 12473 VVSEYRASL True PC9_epitope_Rep2 1022.5396597241798 1022.53856993586 53.287 2 -0.960919140878763 0.28914451793402235 1.0 ['nc|ENSG00000155256|Q5T4F4-4|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-8|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-2|ZFYVE27', 'ENSG00000155256|ENST00000684270|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-3|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-6|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-7|ZFYVE27', 'nc|ENSG00000155256|Q5T4F4-5|ZFYVE27'] 139212 4984 YSVGSESDSSK True NCI_RA007_Epitope_Rep5 1144.48841199696 1144.48675490379 25.875 3 -0.9609575814784856 0.28914451793402235 1.0 ['ENSG00000162105|ENST00000601538|SHANK2', 'SHANK2|p.V1494Gfs*6|1|0.14|ENSG00000162105|chr11:70485812-70485813|-/C|frameshift_variant'] 86880 18126 QRRLDTSSL True NCI_RA007_Epitope_Rep5 1074.57817049122 1074.5770699358602 76.527 2 -0.9610494912087557 0.2891813342025206 1.0 ['ENSG00000196914|ENST00000397843|ARHGEF12', 'nc|ENSG00000196914|Q9NZN5-2|ARHGEF12', 'ENST00000529970.5_1_11:120278459-120348246:+|nuORF'] 57586 11185 LELGFMTLSIF True H1975_Epitope_Rep1 1269.66789701241 1269.6667899358602 47.991 2 -0.9610761176928564 0.28919098773647683 1.0 ['ENST00000391859.6_1_19:49841166-49843582:+|nuORF', 'nc|ENSG00000104894|P11049-2|CD37', 'ENSG00000104894|ENST00000323906|CD37'] 88249 10110 QYERDKHLFID True NCI_RA007_Epitope_Rep1 1462.7204776204596 1462.7193899358601 43.337 2 -0.9611040121637882 0.2892006410082299 1.0 ['ENSG00000100335|ENST00000325301|MIEF1'] 101426 6 SNNDDDED True H1975_Epitope_Rep3 922.27881315354 922.27770993586 0.02711 2 -0.9611449773593472 0.28921029401779047 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 60556 17622 LIQDYFRKFKK True NCI_RA007_Epitope_Rep2 1484.8503695911998 1484.84926993586 73.286 2 -0.961177458137659 0.2892160191208224 1.0 ['nc|ENSG00000157388|Q01668-4|CACNA1D', 'nc|ENSG00000157388|Q01668-3|CACNA1D', 'ENSG00000157388|ENST00000350061|CACNA1D', 'nc|ENSG00000157388|Q01668-2|CACNA1D'] 134170 23979 WRKVLLKG True NCI_RA007_Epitope_Rep3 998.6389202729798 998.6378299358599 103.88 2 -0.961184297004627 0.2892160191208224 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 106394 5280 SVSYDDWDYS True PC9_epitope_Rep5 1235.46186289595 1235.46022490379 25.325 3 -0.9612191189085199 0.28922567152828704 1.0 ['nc|ENSG00000183454|Q12879-2|GRIN2A', 'ENSG00000183454|ENST00000330684|GRIN2A'] 58583 14470 LFEQRRLQQQ True PC9_epitope_Rep5 1344.72623170724 1344.7251299358602 60.66 2 -0.961226303093709 0.2892313959804454 1.0 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2', 'ENST00000489952.5_1_11:64559674-64566943:-|nuORF', 'ENST00000470088.5_1_11:64559674-64564762:-|nuORF'] 107524 4376 TADEVRLLNR True H1975_Epitope_Rep2 1185.6465844042098 1185.64548993586 21.944 2 -0.9612601102554094 0.2892313959804454 1.0 ['ENSG00000019995|ENST00000359653|ZRANB1'] 56908 21398 LEDQEILMHHP True PC9_epitope_Rep2 1360.64453579888 1360.64342993586 87.778 2 -0.9612692289780803 0.2892371201216697 1.0 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000474988.5_1_6:36410818-36454949:+|nuORF', 'nc|ENSG00000112078|Q7Z5Y7-2|KCTD20'] 11025 9395 DDIKEWLEDKG True NCI_RA007_Epitope_Rep2 1346.6354105838197 1346.63430993586 41.153 2 -0.9612948067942507 0.2892371201216697 1.0 ['ENSG00000138385|ENST00000260956|SSB', 'ENST00000474273.5_1_2:170663267-170663405:+|nuORF', 'ENST00000468600.1_1_2:170662301-170663405:+|nuORF'] 83677 11589 QEALEDERQAR True NCI_RA007_Epitope_Rep1 1343.64295557575 1343.6418499358601 49.049 2 -0.9613173256662331 0.28924284395198524 1.0 ['ENSG00000133789|ENST00000318950|SWAP70', 'ENST00000524817.5_1_11:9685687-9762009:+|nuORF', 'ENST00000534562.1_1_11:9749605-9771962:+|nuORF'] 44646 8341 IPKSYTEENLR True NCI_RA007_Epitope_Rep4 1348.6986795467199 1348.6970249037902 38.899 3 -0.9613690180598978 0.28924284395198524 1.0 ['RBM45|p.D135N|1|0.42|ENSG00000155636|chr2:178116364-178116364|G/A|missense_variant'] 89889 22417 RFRDLLVG True NCI_RA007_Epitope_Rep5 974.5661492555398 974.56504993586 93.393 2 -0.9614015702735307 0.2892660737320932 1.0 ['ENST00000476805.2_1_2:64977516-64977744:-|nuORF'] 87560 7713 QTLTNLVSA True PC9_epitope_Rep2 945.51311062317 945.51200993586 35.043 2 -0.9614529999995443 0.2893028813513293 1.0 ['ENST00000454309.6_1_3:192126033-192126612:-|nuORF'] 64862 9341 LSAPQKPQL True PC9_epitope_Rep4 980.5654805492 980.56438993586 43.538 2 -0.9614855970741156 0.2893086030849446 1.0 ['ENST00000291294.6_1_19:47123946-47124471:-|nuORF'] 58696 16404 LFKFGSHGEG True PC9_epitope_Rep5 1077.5243440132099 1077.5232499358601 68.096 2 -0.9614863350200633 0.2893086030849446 1.0 ['nc|ENSG00000110171|O75382-4|TRIM3', 'nc|ENSG00000110171|O75382-3|TRIM3', 'nc|ENSG00000110171|O75382-2|TRIM3', 'ENSG00000110171|ENST00000345851|TRIM3'] 58779 21624 LFNLLSRCLE True PC9_epitope_Rep5 1206.6430792469002 1206.64198993586 88.218 2 -0.9615259429623416 0.2893182527936564 1.0 ['ENSG00000119285|ENST00000366582|HEATR1'] 56838 12384 LEDDRLRKYYL True NCI_RA007_Epitope_Rep2 1482.78307787702 1482.78198993586 52.777 2 -0.9615880188654523 0.28934147997284454 1.0 ['ENSG00000134962|ENST00000257408|KLB'] 102775 6720 SQEMNTLFRFW True NCI_RA007_Epitope_Rep2 1457.6761702803296 1457.6750699358602 30.753 2 -0.9616475456168306 0.28937828406946275 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 134168 24679 WRKVLLKG True NCI_RA007_Epitope_Rep2 998.6389202729798 998.6378299358599 103.75 2 -0.9616704763145735 0.28939758054661724 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 62447 6768 LLSIRGVDGP True H1975_Epitope_Rep3 1025.5869442697697 1025.58584993586 30.988 2 -0.9617059133372086 0.28939758054661724 1.0 ['nc|ENSG00000100095|Q9BYH1-2|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-3|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-5|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-4|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-7|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-6|SEZ6L', 'ENSG00000100095|ENST00000248933|SEZ6L'] 119537 10756 VEQYVHLLDIR True NCI_RA007_Epitope_Rep2 1383.7510494727496 1383.74994993586 46.438 2 -0.9617239105891796 0.2893993700445313 1.0 ['ENSG00000103494|ENST00000647211|RPGRIP1L', 'nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L', 'ENST00000565343.1_1_16:53689488-53692740:-|nuORF'] 134901 22077 YADPSILYI True PC9_epitope_Rep1 1053.5382627418498 1053.53767496793 89.728 1 -0.9617708145293798 0.2893993700445313 1.0 ['nc|ENSG00000048052|Q9UKV0-4|HDAC9', 'nc|ENSG00000048052|Q9UKV0-2|HDAC9', 'nc|ENSG00000048052|Q9UKV0|HDAC9', 'nc|ENSG00000048052|Q9UKV0-6|HDAC9', 'nc|ENSG00000048052|Q9UKV0-5|HDAC9', 'ENSG00000048052|ENST00000686413|HDAC9', 'ENST00000490851.5_1_7:18832955-19035682:+|nuORF'] 97188 19567 SFIICHCSL True PC9_epitope_Rep4 1021.4725087644902 1021.47140993586 83.387 2 -0.9618018482347945 0.2893993700445313 1.0 ['ASCC3|p.P123Sfs*10|1|0.13|ENSG00000112249|chr6:100848582-100848583|-/A|frameshift_variant'] 4777 19620 ALEEYDSYWWL True PC9_epitope_Rep1 1473.6452469915298 1473.64360490379 80.295 3 -0.9618077666720044 0.28940901747288106 1.0 ['PROM1|p.T426A|2|0.27|ENSG00000007062|chr4:16008974-16008974|T/C|missense_variant'] 99186 8839 SLASLHFLWQT True NCI_RA007_Epitope_Rep5 1301.67682190333 1301.67572993586 40.663 2 -0.961829060533619 0.2894322408971191 1.0 ['ENSG00000229474|ENST00000682850|PATL2'] 7530 13088 ASEVEERRLRM True NCI_RA007_Epitope_Rep2 1374.7037820105 1374.70268993586 55.538 2 -0.9618633593377425 0.28945546369079134 1.0 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 131714 10171 VWTKVEGV True NCI_RA007_Epitope_Rep3 916.5018176634799 916.50072993586 47.094 2 -0.9619482341040364 0.2894651099647027 1.0 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 73676 22289 NGNGHEHC True PC9_epitope_Rep6 866.3089485967 866.30784993586 98.706 2 -0.961998730410859 0.28948440172680623 1.0 ['NMT1-NME1|1|fusion', 'ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'NMT1|p.L84Ffs*50|1|0.27|ENSG00000136448|chr17:45086515-45086516|-/TT|frameshift_variant', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 15525 9464 EARQWFGREK True NCI_RA007_Epitope_Rep2 1305.65781779425 1305.65672993586 41.424 2 -0.9620249270639971 0.28948440172680623 1.0 ['ENSG00000204086|ENST00000373040|RPA4'] 30795 12458 GAPLHLCA True PC9_epitope_Rep1 780.39524441996 780.39414993586 52.785 2 -0.9620678035172002 0.2894901172893136 1.0 ['ENST00000531066.5_1_11:16834711-16838638:-|nuORF'] 19745 6933 ELSRESSPD True NCI_RA007_Epitope_Rep1 1018.45671794586 1018.45562993586 30.971 2 -0.962068892765416 0.2894901172893136 1.0 ['ENSG00000196440|ENST00000423738|ARMCX4'] 29703 24416 FVPAWENVGSK True H1975_Epitope_Rep1 1232.6189726740397 1232.6178699358602 101.22 2 -0.96216942493439 0.28952691237358313 1.0 ['ENST00000297875.6_1_X:37985921-37986104:+|nuORF'] 98723 7781 SIRRELLRMFH True PC9_epitope_Rep4 1456.8085218625597 1456.80688490379 37.328 3 -0.9622224662777282 0.2895501316753998 1.0 ['ENSG00000185085|ENST00000330574|INTS5'] 39219 11531 HLHWRMRRHMK True H1975_Epitope_Rep3 1586.8299430968202 1586.82884993586 49.479 2 -0.962359165768233 0.2896372916327306 1.0 ['ENST00000511465.1_1_4:185263030-185268908:-|nuORF'] 60262 16725 LIEDTEDWR True PC9_epitope_Rep4 1175.5458673034298 1175.54422490379 72.301 3 -0.9623711217744518 0.2896372916327306 1.0 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5', 'nc|ENSG00000163110|Q96HC4-3|PDLIM5', 'nc|ENSG00000163110|Q96HC4-2|PDLIM5'] 37713 7713 HARALLPLP True H1975_Epitope_Rep2 986.6025347642599 986.60142993586 34.621 2 -0.9623885272729588 0.2896469342600008 1.0 ['ENST00000488342.5_1_2:165365032-165477819:-|nuORF', 'ENSG00000115290|ENST00000263915|GRB14'] 109319 11794 TGGGGGGD True NCI_RA007_Epitope_Rep5 576.21396849936 576.2134249679301 52.024 1 -0.9624059906755592 0.28965657662549205 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 45379 13343 ISDNYQLWLGR True NCI_RA007_Epitope_Rep1 1363.6884492161898 1363.68734993586 55.905 2 -0.9624353866633163 0.289666218729215 1.0 ['ENST00000593859.5_1_19:51323389-51327022:-|nuORF', 'ENSG00000167748|ENST00000301420|KLK1'] 113288 8140 TQHLERMKDMY True H1975_Epitope_Rep2 1450.6697050008997 1450.66860993586 36.26 2 -0.9625291887272631 0.2897030079270279 1.0 ['ENSG00000204450|ENST00000533122|TRIM64', 'ENSG00000189253|ENST00000329862|TRIM64B'] 20096 7995 ENIKKKECVYF True NCI_RA007_Epitope_Rep2 1399.7169724631501 1399.7158699358602 35.729 2 -0.9626601278075836 0.2897358633982138 1.0 ['ENSG00000142185|ENST00000397928|TRPM2', 'nc|ENSG00000142185|O94759-2|TRPM2', 'nc|ENSG00000142185|O94759-3|TRPM2'] 45261 23913 IRWFWAAVER True PC9_epitope_Rep3 1332.7091250911196 1332.7074749037902 97.268 3 -0.9626721012073381 0.2897358633982138 1.0 ['ENSG00000138411|ENST00000644978|HECW2', 'LRP1B-HECW2|1|fusion', 'nc|ENSG00000002746|Q76N89-2|HECW1', 'HECW1|p.S1539Kfs*53|2|0.23|ENSG00000002746|chr7:43554695-43554696|-/A|frameshift_variant', 'ENSG00000002746|ENST00000395891|HECW1'] 25273 16168 FEDRVLAL True PC9_epitope_Rep3 961.5232813840498 961.52218993586 67.331 2 -0.9626789320587624 0.2897415712036484 1.0 ['ENSG00000186648|ENST00000342740|CARMIL3'] 14213 13722 DSVDKLVIQKY True NCI_RA007_Epitope_Rep2 1306.7132669816997 1306.7121699358602 58.021 2 -0.962695864593594 0.2897415712036484 1.0 ['ENST00000523612.1_1_8:142469282-142469963:+|nuORF'] 116959 21103 TYPISLMLPP True PC9_epitope_Rep3 1130.60456847986 1130.6034699358602 86.454 2 -0.9627445260157884 0.28975121136854104 1.0 ['ENST00000390547.3_3_14:106174264-106174703:-|nuORF'] 92567 7991 RRARTGAA True PC9_epitope_Rep5 857.4943812976098 857.49328993586 35.676 2 -0.9628034074023533 0.28980156898938625 1.0 ['ENST00000398637.9_1_12:46662442-46662643:-|nuORF'] 59175 13086 LGFLKHIRTQ True PC9_epitope_Rep2 1211.7138761183899 1211.71222490379 55.612 3 -0.9628307621163489 0.2898247804666187 1.0 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 135048 6541 YAIVYMHV True NCI_RA007_Epitope_Rep5 994.4946241080601 994.49352993586 31.823 2 -0.9629058659071901 0.2898497618175156 1.0 ['ENST00000343255.9_1_1:24295819-24295903:-|nuORF'] 65526 11709 LSFYWFKYYVY True H1975_Epitope_Rep1 1577.75948889813 1577.7583899358601 50.03 2 -0.9629280402188629 0.2898497618175156 1.0 ['ENST00000509649.5_1_5:21459626-21462031:+|nuORF'] 34016 10205 GNKPSLTNPF True NCI_RA007_Epitope_Rep5 1073.55055876105 1073.54946993586 45.886 2 -0.9629413553188607 0.2898497618175156 1.0 ['ENSG00000132182|ENST00000254508|NUP210', 'nc|ENSG00000132182|Q8TEM1-2|NUP210'] 19168 14445 ELKENDRIF True PC9_epitope_Rep2 1162.59823722946 1162.5965849037902 60.831 3 -0.9629522175817473 0.2898497618175156 1.0 ['ENSG00000121858|ENST00000241261|TNFSF10'] 109312 14377 TGGGGGGD True NCI_RA007_Epitope_Rep1 576.21396849936 576.2134249679301 59.965 1 -0.9629699879640206 0.28985939959828455 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 36383 8259 GVHVLTGVSA True PC9_epitope_Rep2 938.5185303567799 938.51742993586 37.127 2 -0.9629893957727872 0.28988221245182655 1.0 ['ENST00000496704.1_1_2:130899553-130900555:-|nuORF'] 48924 21688 KEWRNRRKKRR True PC9_epitope_Rep6 1611.9658423226695 1611.9641849037898 96.31 3 -0.963011886629753 0.28988221245182655 1.0 ['COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A'] 94165 13028 RWLEKEERFLK True NCI_RA007_Epitope_Rep1 1532.8463468399198 1532.84470490379 54.669 3 -0.9630408006424661 0.28988221245182655 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 3013 8302 AFQNREEP True PC9_epitope_Rep1 989.4566583762098 989.45556993586 36.767 2 -0.9630448462656299 0.28988221245182655 1.0 ['nc|ENSG00000120156|Q02763-3|TEK'] 82735 15614 PVPTTVPV True PC9_epitope_Rep3 808.4694549060399 808.46834993586 65.207 2 -0.9630492995239254 0.28988221245182655 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2', 'nc|ENSG00000065243|Q16513-4|PKN2', 'nc|ENSG00000065243|Q16513-2|PKN2', 'ENSG00000065243|ENST00000370521|PKN2', 'nc|ENSG00000065243|Q16513-5|PKN2', 'nc|ENSG00000065243|Q16513-3|PKN2'] 134669 15846 WWNLRRTCFRI True NCI_RA007_Epitope_Rep1 1549.8088562157297 1549.80774993586 65.734 2 -0.9630587084603189 0.28988221245182655 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 82662 14064 PVLTHRAP True H1975_Epitope_Rep2 889.51338540669 889.5122899358599 59.249 2 -0.9630716750857493 0.28988221245182655 1.0 ['ENST00000480273.5_1_20:62319266-62327135:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-9|RTEL1', 'nc|ENSG00000258366|Q9NZ71|RTEL1', 'nc|ENSG00000258366|Q9NZ71-7|RTEL1', 'ENSG00000258366|ENST00000360203|RTEL1', 'nc|ENSG00000258366|Q9NZ71-2|RTEL1', 'ENST00000496816.5_1_20:62325699-62327208:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-5|RTEL1', 'ENST00000496281.1_1_20:62323608-62327208:+|nuORF'] 11128 6124 DEEKKKSP True H1975_Epitope_Rep3 959.4923751785899 959.49126993586 28.568 2 -0.9630829028863699 0.28988221245182655 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 110495 16805 TIQDGRLYL True PC9_epitope_Rep2 1077.5818588893299 1077.5807699358602 69.888 2 -0.9631335936637285 0.2898839812741706 1.0 ['nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1'] 11281 5774 DESETEWWWAR True H1975_Epitope_Rep1 1493.62115750201 1493.62006993586 27.28 2 -0.9631368024598346 0.2898839812741706 1.0 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B', 'ENST00000555825.5_1_14:104201493-104202681:-|nuORF', 'ENST00000556334.5_1_14:104201493-104205387:-|nuORF'] 19946 10942 ELYYTLHAP True PC9_epitope_Rep4 1105.54441075145 1105.5433099358602 49.857 2 -0.9631496261861096 0.2898839812741706 1.0 ['ENSG00000181291|ENST00000631683|TMEM132E'] 112085 19812 TLTMQSLRI True PC9_epitope_Rep2 1061.5903153980498 1061.58920993586 81.596 2 -0.9631731758968857 0.2898936170212766 1.0 ['OASL|p.H284Tfs*47|1|0.28|ENSG00000135114|chr12:121027625-121027625|G/-|frameshift_variant'] 99824 7053 SLGVAMHLC True PC9_epitope_Rep5 929.44629401665 929.44518993586 32.098 2 -0.9632043125368613 0.2899032525068863 1.0 ['ENSG00000254126|ENST00000643224|CD8B2'] 105685 10802 SVGLLTNEL True PC9_epitope_Rep6 944.5178616504401 944.51676993586 52.392 2 -0.963228610631401 0.2899089539885209 1.0 ['ENSG00000198483|ENST00000355594|ANKRD35'] 119759 10986 VETQIYRP True NCI_RA007_Epitope_Rep5 1004.5290950404799 1004.52798993586 48.894 2 -0.9632601713754646 0.2899089539885209 1.0 ['ENST00000429864.1_1_X:127575186-127575687:+|nuORF'] 81680 1722 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 9.701 3 -0.9633489422141469 0.28993215739484396 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 6409 17274 APSEVSPPDLW True H1975_Epitope_Rep2 1196.5713537752797 1196.5702499358601 71.735 2 -0.9633712970667955 0.2899396241774642 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A'] 13351 6403 DMWRFLMPQTP True H1975_Epitope_Rep1 1420.66316306848 1420.66150490379 29.688 3 -0.9633812904706054 0.2899396241774642 1.0 ['ENST00000490115.5_1_3:48576700-48581056:-|nuORF'] 67911 22830 LTLDPNDENL True PC9_epitope_Rep3 1142.5455329502602 1142.54442993586 93.088 2 -0.9633926057502863 0.2899396241774642 1.0 ['nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 5463 18840 ALYNLVSV True PC9_epitope_Rep6 877.49091862661 877.48982993586 85.112 2 -0.9634006926223847 0.2899396241774642 1.0 ['ENSG00000160445|ENST00000291900|ZER1'] 5782 14340 APENQKFI True PC9_epitope_Rep4 945.4919812557698 945.49088993586 63.061 2 -0.9634135852478559 0.2899396241774642 1.0 ['ENSG00000119514|ENST00000375011|GALNT12', 'nc|ENSG00000119514|Q8IXK2-2|GALNT12'] 69553 18871 LVTGGYDYDV True PC9_epitope_Rep5 1100.50260550912 1100.5015099358602 77.607 2 -0.9634532576281217 0.2899409889439056 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 36085 8462 GVEFHYVYSHF True NCI_RA007_Epitope_Rep5 1383.62478633047 1383.62368993586 39.23 2 -0.9634765683804641 0.2899409889439056 1.0 ['ENSG00000143815|ENST00000272163|LBR'] 86356 9119 QQLEITEY True H1975_Epitope_Rep1 1022.49204082542 1022.4909499358599 39.98 2 -0.9634931158721854 0.2899409889439056 1.0 ['SLITRK6|p.G770E|1|0.21|ENSG00000184564|chr13:85794200-85794200|C/T|missense_variant'] 114082 10675 TRRAAAAI True NCI_RA007_Epitope_Rep3 828.4929843152798 828.49188993586 49.036 2 -0.9635069227377984 0.2899409889439056 1.0 ['chr1:1204486-1206385|116|17.83|0.05|8.49|-|0|TNFRSF18,TNFRSF18|1'] 122678 17766 VGTRHKAL True PC9_epitope_Rep6 880.52428444356 880.52318993586 80.97 2 -0.963603261613754 0.2899409889439056 1.0 ['ENSG00000135046|ENST00000257497|ANXA1', 'ENST00000491192.1_1_9:75783887-75785020:+|nuORF'] 33648 20260 GLPAFELRWRA True NCI_RA007_Epitope_Rep1 1314.71968977482 1314.71858993586 83.012 2 -0.9636686799887264 0.2899409889439056 1.0 ['ENST00000480952.1_1_1:54298234-54304135:-|nuORF'] 12236 5625 DIQQKIAT True NCI_RA007_Epitope_Rep5 915.5025459394699 915.50144993586 28.325 2 -0.9636764299921912 0.2899409889439056 1.0 ['SPICE1|p.E503Kfs*17|2|0.13|ENSG00000163611|chr3:113457286-113457286|C/-|frameshift_variant', 'ENST00000496105.1_1_3:113169108-113212968:-|nuORF', 'ENSG00000163611|ENST00000295872|SPICE1'] 135960 21114 YFCPCPCG True NCI_RA007_Epitope_Rep2 888.2968529016399 888.29574993586 87.336 2 -0.9637341393778509 0.2899409889439056 1.0 ['nc|ENSG00000233838|Q9H4G8|DPH3P1'] 15074 7521 EAAVDGFRQPL True NCI_RA007_Epitope_Rep2 1201.6091362663299 1201.60802993586 33.881 2 -0.9637553066165204 0.2899409889439056 1.0 ['nc|ENSG00000151893|Q86Y37-2|CACUL1', 'ENSG00000151893|ENST00000369151|CACUL1'] 133576 15005 WIEIAYGT True NCI_RA007_Epitope_Rep3 951.4701831820299 951.46908993586 66.486 2 -0.9637669572118613 0.2899409889439056 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1', 'nc|ENSG00000136636|Q9Y597-2|KCTD3', 'ENSG00000136636|ENST00000259154|KCTD3'] 32910 16006 GIPANRIVL True PC9_epitope_Rep3 951.5865503469499 951.58544993586 66.713 2 -0.9638058994990097 0.28998087591042876 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 72642 7057 MWFSWGVL True PC9_epitope_Rep6 1024.4840594243597 1024.4829699358602 36.16 2 -0.9638508022486624 0.28998087591042876 1.0 ['nc|ENSG00000176884|Q05586-2|GRIN1', 'nc|ENSG00000176884|Q05586-3|GRIN1', 'nc|ENSG00000176884|Q05586-7|GRIN1', 'nc|ENSG00000176884|Q05586-4|GRIN1', 'ENSG00000176884|ENST00000371561|GRIN1', 'nc|ENSG00000176884|Q05586-6|GRIN1', 'nc|ENSG00000176884|Q05586-5|GRIN1'] 29963 16364 FYAGTQPPVI True PC9_epitope_Rep5 1091.56514619603 1091.56404993586 67.943 2 -0.9639538724361075 0.28998087591042876 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 91180 9522 RLPTPEQI True PC9_epitope_Rep4 952.5341804209199 952.53308993586 44.236 2 -0.9640027235229077 0.28998087591042876 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 64314 19006 LQMLELITR True PC9_epitope_Rep1 1115.63726559047 1115.6361699358602 77.895 2 -0.9640274359582987 0.28998087591042876 1.0 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 116450 4398 TWYQHQPA True PC9_epitope_Rep2 1029.4668291370897 1029.46572993586 22.267 2 -0.9640512204239334 0.28998087591042876 1.0 ['ENST00000426683.5_1_4:89514469-89527042:+|nuORF', 'ENST00000452979.5_1_4:89514620-89527042:+|nuORF'] 82839 12426 PVSWREDP True PC9_epitope_Rep1 984.4664947839199 984.46538993586 52.66 2 -0.9640579510452456 0.28998087591042876 1.0 ['TNS2|p.G883D|1|0.46|ENSG00000111077|chr12:53060435-53060435|G/A|missense_variant'] 79110 13536 PFYNTLNKGP True PC9_epitope_Rep1 1149.5818588893299 1149.58021490379 56.922 3 -0.9640588555731838 0.28998087591042876 1.0 ['ADAMTS12|p.T1148N|1|0.23|ENSG00000151388|chr5:33576583-33576583|G/T|missense_variant'] 67847 10261 LTIWDVTVEF True PC9_epitope_Rep4 1221.6281403754099 1221.62650490379 47.152 3 -0.9640613365283253 0.28998087591042876 1.0 ['ZNF257|p.R7W|1|0.39|ENSG00000197134|chr19:22072824-22072824|A/T|missense_variant'] 82606 25773 PVKKSLLG True PC9_epitope_Rep1 840.5432885526399 840.54218993586 104.2 2 -0.9640659047710496 0.28998087591042876 1.0 ['ENST00000397909.6_1_12:78388596-78392184:+|nuORF'] 69566 21915 LVTKKKRFWCW True NCI_RA007_Epitope_Rep1 1493.8329457052498 1493.83129490379 89.733 3 -0.9640769286267917 0.28998087591042876 1.0 ['ENST00000493723.5_1_7:24756537-24789393:-|nuORF', 'ENST00000473990.1_1_7:24784179-24789393:-|nuORF', 'ENSG00000105928|ENST00000645220|GSDME'] 4749 12504 ALEDLKFLPE True NCI_RA007_Epitope_Rep1 1173.6281403754099 1173.6270499358602 52.617 2 -0.9640881649380053 0.28998087591042876 1.0 ['ENST00000216019.11_1_22:38885294-38885507:-|nuORF'] 70255 8292 LYNFDLRGKDK True H1975_Epitope_Rep1 1367.7197493444698 1367.7186499358602 36.827 2 -0.9641010181346613 0.28998087591042876 1.0 ['ENSG00000156463|ENST00000359120|SH3RF2', 'SH3RF2|p.S564Qfs*64|1|0.55|ENSG00000156463|chr5:146059995-146059995|C/-|frameshift_variant', 'SH3RF2|p.A673Rfs*13|1|0.23|ENSG00000156463|chr5:146062527-146062527|G/-|frameshift_variant'] 52955 22389 KRLQDEERRKK True PC9_epitope_Rep4 1484.8535574786795 1484.8524699358602 94.353 2 -0.9641248625296799 0.28998087591042876 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 56895 9523 LEDPLRLSP True H1975_Epitope_Rep1 1038.57095985246 1038.5698699358602 41.552 2 -0.9644156129098618 0.29012613590126135 1.0 ['nc|ENSG00000289604|P0CG41|CTAGE8', 'nc|ENSG00000288784|Q8IX94|CTAGE4', 'ENSG00000236761|ENST00000314099|CTAGE9', 'ENST00000451540.1_1_13:75812162-75812900:-|nuORF'] 57518 14265 LEKRIEDL True PC9_epitope_Rep1 1014.5709598524599 1014.56986993586 59.694 2 -0.9644995446843023 0.2901432136269936 1.0 ['ENSG00000157741|ENST00000473989|UBN2', 'nc|ENSG00000157741|Q6ZU65-2|UBN2'] 32811 17662 GIFNSELEFV True PC9_epitope_Rep2 1153.56554011885 1153.56444993586 73.217 2 -0.9645124027771572 0.2901432136269936 1.0 ['LDLRAD4|p.A66V|1|0.34|ENSG00000168675|chr18:13621132-13621132|C/T|missense_variant'] 82607 25568 PVKKSLLG True PC9_epitope_Rep2 840.5432885526399 840.54218993586 104.03 2 -0.9645134606625869 0.2901432136269936 1.0 ['ENST00000397909.6_1_12:78388596-78392184:+|nuORF'] 32358 909 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 4.7973 2 -0.9645250444963547 0.2901432136269936 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 41357 8442 IAMLCKGL True PC9_epitope_Rep5 847.46596683207 847.46486993586 37.415 2 -0.9645437003057963 0.2901432136269936 1.0 ['TTC13|p.Y288C|1|0.09|ENSG00000143643|chr1:230939423-230939423|T/C|missense_variant'] 75394 5211 NQENHLSRR True H1975_Epitope_Rep3 1152.57481644628 1152.57370993586 25.13 2 -0.964554392891329 0.2901432136269936 1.0 ['ZNF624|p.Q188R|2|0.14|ENSG00000197566|chr17:16624323-16624323|T/C|missense_variant'] 113335 9298 TQKKTKST True PC9_epitope_Rep5 920.52909504048 920.52798993586 40.715 2 -0.964659158688671 0.29016422343065595 1.0 ['nc|ENSG00000138336|Q8NFU7-2|TET1', 'ENSG00000138336|ENST00000373644|TET1'] 106380 20803 SVSSMLLEGH True PC9_epitope_Rep5 1058.50664534374 1058.50554993586 85.068 2 -0.9646622555751456 0.29016422343065595 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 81679 1658 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 9.334 3 -0.9646786827411383 0.29016422343065595 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 82726 16940 PVPTLWNEPAE True H1975_Epitope_Rep1 1251.6135529404298 1251.6129749679299 70.578 1 -0.9647149584836356 0.29016422343065595 1.0 ['ENST00000467665.1_1_2:233740591-233741063:+|nuORF', 'ENSG00000182600|ENST00000331342|SNORC', 'ENST00000449331.3_1_2:233740159-233741063:+|nuORF'] 58015 10677 LEREEYLL True PC9_epitope_Rep3 1063.5549754351498 1063.5538699358601 46.014 2 -0.9647241846571315 0.29016422343065595 1.0 ['nc|ENSG00000031003|Q9NYF5-2|FAM13B', 'nc|ENSG00000031003|Q9NYF5|FAM13B', 'ENSG00000031003|ENST00000689681|FAM13B', 'nc|ENSG00000031003|Q9NYF5-3|FAM13B'] 70675 4183 MDHENMFWYR True NCI_RA007_Epitope_Rep1 1427.57507634007 1427.57344490379 20.36 3 -0.9648574720439037 0.2902512780874117 1.0 ['nc|ENSG00000211753|A0A5B6|TRBV28'] 104490 6761 SSPESALTH True NCI_RA007_Epitope_Rep1 927.42977492203 927.42866993586 30.307 2 -0.9648693043578146 0.2902512780874117 1.0 ['ENSG00000180532|ENST00000318203|ZSCAN4'] 14207 16811 DSTVLCPLRGR True H1975_Epitope_Rep1 1215.6393908487898 1215.63828993586 70.071 2 -0.9649645529023286 0.2902705268153773 1.0 ['ENST00000560365.5_1_14:24631516-24632718:+|nuORF', 'ENST00000559284.5_1_14:24631519-24633284:+|nuORF'] 131622 14606 VVYRDLKP True PC9_epitope_Rep4 988.5705659296399 988.56946993586 64.112 2 -0.9649743634755156 0.2902705268153773 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000526572.5_1_11:67049183-67049837:+|nuORF', 'ENSG00000100077|ENST00000324198|GRK3'] 69407 8360 LVQRWRKK True NCI_RA007_Epitope_Rep5 1112.6930811041598 1112.6919899358602 38.829 2 -0.9650313175823334 0.2902993979497749 1.0 ['ENST00000328902.9_1_7:150325594-150329348:-|nuORF'] 114083 1257 TRRAAAAI True NCI_RA007_Epitope_Rep4 828.4929843152798 828.49188993586 7.0439 2 -0.9650514089627706 0.2902993979497749 1.0 ['chr1:1204486-1206385|116|17.83|0.05|8.49|-|0|TNFRSF18,TNFRSF18|1'] 121525 20718 VGKKICLSIS True PC9_epitope_Rep6 1046.6158018698998 1046.6147099358602 92.452 2 -0.9650761399664556 0.2902993979497749 1.0 ['ENSG00000198833|ENST00000435041|UBE2J1'] 7504 5857 ASEGMRFVDF True PC9_epitope_Rep5 1157.51754438061 1157.51590490379 27.521 3 -0.9651204368579743 0.2903050847457627 1.0 ['ENSG00000141337|ENST00000621439|ARSG'] 68144 9877 LTPPRTRDAK True H1975_Epitope_Rep1 1153.6567551650899 1153.65564993586 42.925 2 -0.9651308973252812 0.2903050847457627 1.0 ['ENST00000266529.7_1_12:42719776-42719875:-|nuORF'] 23162 5135 EVPASFHSER True NCI_RA007_Epitope_Rep1 1157.5465360097699 1157.54488490379 24.057 3 -0.9652160085492387 0.2903243301876559 1.0 ['HRH4|p.M276Wfs*10|1|0.37|ENSG00000134489|chr18:24477212-24477212|A/-|frameshift_variant', 'nc|ENSG00000134489|Q9H3N8-2|HRH4', 'ENSG00000134489|ENST00000256906|HRH4'] 57156 9077 LEERQRFQEER True H1975_Epitope_Rep1 1518.75390300706 1518.7528099358601 39.819 2 -0.9652415808209167 0.2903243301876559 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1'] 100203 10175 SLLHVPWR True H1975_Epitope_Rep3 1006.57123463598 1006.57012993586 44.183 2 -0.9652565582831275 0.29033395251718574 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'ENST00000464728.5_1_16:838721-840735:+|nuORF', 'ENST00000479976.5_1_16:838624-840569:+|nuORF', 'CHTF18|p.R562Pfs*52|1|0.28|ENSG00000127586|chr16:793154-793155|-/C|frameshift_variant'] 66870 23109 LSWFFLLIRYK True PC9_epitope_Rep5 1484.8543923424797 1484.8532899358602 93.875 2 -0.9653043282628321 0.2903435745857852 1.0 ['nc|ENSG00000196376|Q5T1Q4-2|SLC35F1', 'ENSG00000196376|ENST00000360388|SLC35F1'] 86663 15944 QRGQGRGP True NCI_RA007_Epitope_Rep5 854.4470967520198 854.44598993586 68.054 2 -0.9653536239401406 0.2903820602510914 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 78386 8953 PAVHKLTKRI True H1975_Epitope_Rep3 1161.73461156297 1161.73297490379 39.435 3 -0.9653595583933505 0.2903820602510914 1.0 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-23|FGFR2', 'ENST00000604236.5_1_10:123239373-123278228:-|nuORF'] 111099 4773 TLEERSGP True NCI_RA007_Epitope_Rep3 887.4348603024698 887.43376993586 25.737 2 -0.9653641168714371 0.2903820602510914 1.0 ['ENSG00000130202|ENST00000252483|NECTIN2'] 91267 14184 RLVVVGGGGVG True NCI_RA007_Epitope_Rep5 968.5767139392397 968.57560993586 61.249 2 -0.9653766361907354 0.2903820602510914 1.0 ['ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2'] 109311 13647 TGGGGGGD True H1975_Epitope_Rep3 576.21396849936 576.2134249679301 57.784 1 -0.9654450365152978 0.2904148590021692 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 112030 23528 TLSVLDFKSIV True PC9_epitope_Rep3 1220.70163966884 1220.7005499358602 95.782 2 -0.9654452228178576 0.2904148590021692 1.0 ['ENST00000489690.1_1_3:149842768-149931467:+|nuORF'] 118251 22609 VCKKFKKI True PC9_epitope_Rep2 992.6204933275199 992.61938993586 92.464 2 -0.9654866137675499 0.2904380363606784 1.0 ['ENST00000366962.7_1_1:213178706-213181562:-|nuORF'] 55800 8997 LDEKRRKRWDI True NCI_RA007_Epitope_Rep2 1513.8477438222499 1513.8466499358601 39.6 2 -0.9655170741640963 0.2904437183954015 1.0 ['ENSG00000188895|ENST00000398532|MSL1', 'ENST00000339569.9_1_17:38287776-38290619:+|nuORF', 'nc|ENSG00000188895|Q68DK7-3|MSL1', 'nc|ENSG00000188895|Q68DK7-2|MSL1'] 92658 20587 RRFVGLGT True NCI_RA007_Epitope_Rep1 904.5242844435598 904.52318993586 84.303 2 -0.9655428644257534 0.2904437183954015 1.0 ['nc|ENSG00000153086|Q8TDX5-2|ACMSD', 'ENSG00000153086|ENST00000356140|ACMSD'] 40625 22096 HTFDRYRSQ True PC9_epitope_Rep1 1208.5686684366801 1208.56756993586 89.805 2 -0.9655968872053624 0.29047651325154206 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 99928 14388 SLIEKHKF True PC9_epitope_Rep4 1000.57056592964 1000.56946993586 63.253 2 -0.9656127064048515 0.29047651325154206 1.0 ['ENST00000448876.5_1_3:185009682-185009805:+|nuORF'] 128045 26155 VRRKGLGK True PC9_epitope_Rep5 912.5981180901598 912.5975649679301 106.31 1 -0.9656321635541854 0.29048613182224875 1.0 ['ENST00000544194.5_1_11:63720210-63721948:+|nuORF', 'nc|ENSG00000110583|Q86UY6-4|NAA40', 'nc|ENSG00000110583|Q86UY6-3|NAA40', 'ENST00000534965.5_1_11:63706554-63721948:+|nuORF', 'ENSG00000110583|ENST00000377793|NAA40', 'ENST00000338447.10_1_11:63714317-63721948:+|nuORF'] 4748 11977 ALEDLKFLPE True H1975_Epitope_Rep3 1173.6281403754099 1173.6270499358602 51.228 2 -0.9656610352596166 0.2904874213836478 1.0 ['ENST00000216019.11_1_22:38885294-38885507:-|nuORF'] 37833 9936 HDITPIILAAH True H1975_Epitope_Rep1 1199.66625721963 1199.6646149037902 43.154 3 -0.965667075897132 0.2904874213836478 1.0 ['nc|ENSG00000069018|Q9HCX4-2|TRPC7', 'nc|ENSG00000069018|Q9HCX4-3|TRPC7', 'ENSG00000069018|ENST00000513104|TRPC7'] 92713 12564 RRIIAQFSKDY True H1975_Epitope_Rep1 1395.7622828627898 1395.76118993586 53.372 2 -0.9656737877306003 0.2904874213836478 1.0 ['ENSG00000204131|ENST00000633930|NHSL2'] 122477 19111 VGSPVRQRRS True NCI_RA007_Epitope_Rep1 1140.64758746372 1140.64707496793 78.477 1 -0.9657104066411649 0.2904874213836478 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 115643 15734 TVIVIMAP True PC9_epitope_Rep2 842.4935614788999 842.49246993586 65.791 2 -0.9657459415322516 0.2904874213836478 1.0 ['SVA_D_dup510|chr6:31931263-31933153:-|1.361304798526969|0.209081615354236|2.7|498.0|53|1|anti-sense'] 19613 13400 ELRNQLLNV True PC9_epitope_Rep4 1097.61930702721 1097.61820993586 59.444 2 -0.9657694523273175 0.2904874213836478 1.0 ['nc|ENSG00000173588|Q9Y592-2|CEP83', 'ENSG00000173588|ENST00000397809|CEP83'] 24461 11526 FAIASFAT True PC9_epitope_Rep4 826.42250471362 826.42140993586 52.096 2 -0.9657874273335509 0.2904874213836478 1.0 ['ENSG00000156860|ENST00000356166|FBRS', 'ENST00000498588.1_1_16:30671247-30671787:+|nuORF', 'ENST00000484152.1_1_16:30671247-30673851:+|nuORF'] 82653 20957 PVLQEDHCDS True PC9_epitope_Rep1 1141.47098811101 1141.46988993586 85.434 2 -0.9658082955551613 0.2904874213836478 1.0 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 118328 16954 VDESGNPES True NCI_RA007_Epitope_Rep5 932.37231961556 932.37122993586 71.972 2 -0.9658357057316698 0.2904874213836478 1.0 ['ENSG00000177189|ENST00000379565|RPS6KA3', 'RPS6KA3|p.I557V|1|0.62|ENSG00000177189|chrX:20164994-20164994|T/C|missense_variant'] 15371 9280 EALKTSKNRDN True H1975_Epitope_Rep1 1274.6578773638998 1274.6567899358602 40.607 2 -0.9658537301743481 0.2904874213836478 1.0 ['CEP290|p.E1812D|1|0.21|ENSG00000198707|chr12:88077847-88077847|T/G|missense_variant'] 64700 27121 LRLLRLKLK True NCI_RA007_Epitope_Rep3 1151.8230326445498 1151.82139490379 119.08 3 -0.965876788290128 0.29050665510043644 1.0 ['ENSG00000105329|ENST00000221930|TGFB1'] 85183 10265 QKEDQSEDKKR True NCI_RA007_Epitope_Rep1 1389.6848203877296 1389.6837299358601 43.939 2 -0.965888400048672 0.29050665510043644 1.0 ['ENST00000564176.5_1_16:31485144-31486093:+|nuORF', 'ENST00000568142.2_1_16:31484766-31486093:+|nuORF', 'nc|ENSG00000140682|O43294-2|TGFB1I1', 'ENST00000567066.6_1_16:31483405-31488894:+|nuORF', 'ENSG00000140682|ENST00000394863|TGFB1I1'] 30941 9637 GASLGEKKEL True PC9_epitope_Rep4 1030.56587447202 1030.56476993586 44.693 2 -0.9659160132809085 0.29052982556011875 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B'] 24850 15768 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 65.957 2 -0.9660388857106547 0.2905936568175657 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 32958 10634 GISPGARK True H1975_Epitope_Rep1 784.4555361774 784.45498496793 45.861 1 -0.9661246946420469 0.2906168254699719 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 17916 8545 EIDSYLRRELI True H1975_Epitope_Rep1 1405.75652877601 1405.75489490379 37.794 3 -0.966145262273732 0.2906264400531295 1.0 ['ENSG00000186854|ENST00000409520|TRABD2A', 'nc|ENSG00000186854|Q86V40-2|TRABD2A', 'ENST00000460991.1_1_2:85066267-85069119:-|nuORF'] 71622 22570 MLLSKQFV True PC9_epitope_Rep2 964.5415743004801 964.54046993586 92.309 2 -0.9662712931417 0.29065528223893744 1.0 ['ENSG00000137100|ENST00000259632|DCTN3', 'ENST00000481438.1_1_9:34613781-34613940:-|nuORF', 'ENST00000479399.5_1_9:34613781-34614146:-|nuORF', 'ENST00000472418.5_1_9:34613781-34614781:-|nuORF', 'nc|ENSG00000137100|O75935-3|DCTN3'] 61747 23378 LLIVLIPWKKI True NCI_RA007_Epitope_Rep3 1334.9053652861796 1334.9042699358602 101.5 2 -0.9662799058928406 0.29065528223893744 1.0 ['ENSG00000188211|ENST00000338965|NCR3LG1'] 100680 4801 SLQWRHRWDTP True PC9_epitope_Rep5 1480.7323797168397 1480.73074490379 23.511 3 -0.9663344164912424 0.29065528223893744 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 102388 7175 SPVSPVKHD True PC9_epitope_Rep1 964.4977949122001 964.49668993586 32.41 2 -0.9664380372876826 0.2906784484861627 1.0 ['chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|90', 'chr15:53523322-53684228|265|18.12|0.04|8.74|-|2|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|79'] 128044 25289 VRRKGLGK True PC9_epitope_Rep4 912.5981180901598 912.5975649679301 106.08 1 -0.9664738263741196 0.29070161410546574 1.0 ['ENST00000544194.5_1_11:63720210-63721948:+|nuORF', 'nc|ENSG00000110583|Q86UY6-4|NAA40', 'nc|ENSG00000110583|Q86UY6-3|NAA40', 'ENST00000534965.5_1_11:63706554-63721948:+|nuORF', 'ENSG00000110583|ENST00000377793|NAA40', 'ENST00000338447.10_1_11:63714317-63721948:+|nuORF'] 82207 10958 PTGSLLDLRE True H1975_Epitope_Rep2 1099.58733819259 1099.58624993586 47.181 2 -0.966523224516594 0.29073439130493706 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF'] 76403 12285 NSNAVLSF True PC9_epitope_Rep3 850.41848196234 850.41738993586 52.282 2 -0.966523511191342 0.29073439130493706 1.0 ['ENST00000370339.7_1_20:61827244-61827448:-|nuORF'] 55318 19450 LARRWPLARCA True NCI_RA007_Epitope_Rep5 1311.7346286463098 1311.73297490379 81.702 3 -0.966547883557592 0.29074967476149177 1.0 ['ENST00000373034.8_1_X:99665079-99665142:-|nuORF'] 76143 22506 NRRFCLLGVFI True PC9_epitope_Rep4 1336.7437963476798 1336.7426899358602 94.8 2 -0.9665602354651022 0.29074967476149177 1.0 ['nc|ENSG00000140937|P55287-2|CDH11'] 19248 18905 ELLFLFLWKWK True NCI_RA007_Epitope_Rep1 1521.87479343389 1521.87368993586 77.678 2 -0.96656991263727 0.29074967476149177 1.0 ['ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 100252 7824 SLLQRQTL True PC9_epitope_Rep3 957.56072952193 957.55962993586 35.084 2 -0.9666643822069635 0.2907959996747703 1.0 ['ENSG00000083828|ENST00000396154|ZNF586', 'nc|ENSG00000083828|Q9NXT0-3|ZNF586', 'ENST00000396150.4_1_19:58281140-58291161:+|nuORF'] 16188 6109 EEEYPLMIMRK True NCI_RA007_Epitope_Rep5 1437.6996081468499 1437.69850993586 30.179 2 -0.9666664541587212 0.2907959996747703 1.0 ['ENST00000489282.1_1_1:59158492-59165724:-|nuORF'] 13015 19462 DLQPFSTYMIQ True PC9_epitope_Rep1 1341.62748875241 1341.62638993586 79.677 2 -0.9666941902728644 0.2908112795913113 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1'] 124070 21828 VKRLLKKQVVR True NCI_RA007_Epitope_Rep4 1365.92962297141 1365.92797490379 94.622 3 -0.9667106517572701 0.2908112795913113 1.0 ['ENSG00000175931|ENST00000319380|UBE2O', 'UBE2O|p.H1018Tfs*12|1|0.15|ENSG00000175931|chr17:76392008-76392008|G/-|frameshift_variant'] 79535 17646 PGSAKRGR True PC9_epitope_Rep3 827.4725832238698 827.47148993586 73.068 2 -0.9667129150845821 0.2908112795913113 1.0 ['ENSG00000205639|ENST00000338315|MFSD2B'] 66133 12701 LSPDDSIDE True H1975_Epitope_Rep2 989.41893545481 989.41782993586 53.955 2 -0.9667363466912193 0.2908208894549988 1.0 ['nc|ENSG00000102385|Q13474-2|DRP2', 'ENSG00000102385|ENST00000395209|DRP2'] 87269 24759 QSSFLKRIKKR True NCI_RA007_Epitope_Rep5 1389.8568519539697 1389.85574993586 102.72 2 -0.9667746243071738 0.2908265582655827 1.0 ['ENST00000269195.5_1_18:33243615-33243678:+|nuORF'] 60273 12279 LIEILEENRK True NCI_RA007_Epitope_Rep2 1255.7136013348697 1255.71250993586 52.364 2 -0.9667780490564184 0.2908265582655827 1.0 ['nc|ENSG00000115970|Q6YHU6-6|THADA', 'nc|ENSG00000115970|Q6YHU6-5|THADA', 'nc|ENSG00000115970|Q6YHU6-3|THADA', 'ENSG00000115970|ENST00000405975|THADA'] 78458 5056 PCWLHHRFD True PC9_epitope_Rep3 1209.55018192157 1209.5490899358601 24.535 2 -0.9668481755642995 0.29089036733919593 1.0 ['ENSG00000131400|ENST00000253719|NAPSA'] 42038 9358 IEDYDVIAS True PC9_epitope_Rep6 1023.4760564081099 1023.4749499358601 46.184 2 -0.9669175101238328 0.290913525378716 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 28219 11651 FRRHIRQHS True PC9_epitope_Rep5 1235.67480527107 1235.6731649037902 49.811 3 -0.9669915820781865 0.29096944651446377 1.0 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 13751 13232 DQLKRNHTRV True H1975_Epitope_Rep1 1265.69526593213 1265.6941699358601 55.994 2 -0.9670218052328796 0.29096944651446377 1.0 ['MYH8|p.K1812Rfs*39|1|0.41|ENSG00000133020|chr17:10392861-10392861|C/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8'] 138644 25170 YRRQLQARTIE True PC9_epitope_Rep1 1432.7898945929594 1432.7887899358602 101.7 2 -0.9670295647402597 0.29096944651446377 1.0 ['ENSG00000148798|ENST00000369849|INA'] 29948 8939 FWWWFLHKFR True NCI_RA007_Epitope_Rep2 1551.7927951454296 1551.79114490379 39.396 3 -0.9670437292767367 0.2909711684370258 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B', 'ENST00000558615.5_1_15:49867204-49907386:-|nuORF', 'ENSG00000166262|ENST00000299338|FAM227B'] 28139 19464 FRKKKREQ True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 79.868 2 -0.9670516148971867 0.2909711684370258 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 19749 11171 ELSSAAGLP True PC9_epitope_Rep2 843.43379767331 843.43270993586 48.295 2 -0.9670532019885222 0.2909711684370258 1.0 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 59390 16468 LGLKAELG True PC9_epitope_Rep5 799.4803539429099 799.47980496793 68.343 1 -0.9670798436551643 0.2909903807072212 1.0 ['ENST00000417753.5_1_3:48557182-48594149:-|nuORF'] 76617 7590 NTGYTALSV True PC9_epitope_Rep1 924.4552613938799 924.45416993586 34.015 2 -0.9671130206041465 0.2909903807072212 1.0 ['ENST00000415993.5_1_22:50686492-50688322:-|nuORF'] 106416 7015 SVTKDIWK True NCI_RA007_Epitope_Rep3 975.5389314481898 975.53782993586 34.708 2 -0.9671674330145608 0.2910366878014415 1.0 ['nc|ENSG00000146453|Q8NA58|PNLDC1', 'ENSG00000146453|ENST00000392167|PNLDC1'] 36151 6980 GVFEEIVP True PC9_epitope_Rep2 888.4592841451598 888.45818993586 32.245 2 -0.9671982426548064 0.2910366878014415 1.0 ['ENST00000375163.5_1_9:100372568-100388015:-|nuORF', 'ENSG00000136925|ENST00000341170|TSTD2'] 111044 13257 TLDPYRYNR True PC9_epitope_Rep1 1196.59382055536 1196.59216490379 55.859 3 -0.9672062585504744 0.2910462926584748 1.0 ['ENSG00000116771|ENST00000375826|AGMAT'] 117354 8486 VAASALLY True H1975_Epitope_Rep3 806.4538048418999 806.45270993586 37.627 2 -0.9672249576537322 0.2910558972552632 1.0 ['ENSG00000165685|ENST00000543484|TMEM52B'] 117381 11233 VACRCWPP True PC9_epitope_Rep1 930.4204136219798 930.41930993586 48.087 2 -0.9672258674376069 0.2910655015918174 1.0 ['ENST00000537638.6_1_12:57881889-57881970:+|nuORF'] 30820 8771 GAPRFLLTFDF True NCI_RA007_Epitope_Rep4 1282.6710082468996 1282.66990993586 40.54 2 -0.9672735553527585 0.2910751056681478 1.0 ['ENSG00000173868|ENST00000310544|PHOSPHO1', 'nc|ENSG00000173868|Q8TCT1-2|PHOSPHO1', 'nc|ENSG00000173868|Q8TCT1-3|PHOSPHO1'] 110699 16897 TIYYHREL True PC9_epitope_Rep1 1093.5556441414901 1093.5545499358602 69.819 2 -0.9673466545398113 0.29111746298378466 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5', 'AGBL5|p.E255Dfs*4|1|0.21|ENSG00000084693|chr2:27055105-27055106|GG/-|frameshift_variant', 'ENST00000477136.5_1_2:27275826-27278122:+|nuORF', 'ENST00000489683.5_1_2:27275826-27279072:+|nuORF', 'nc|ENSG00000084693|Q8NDL9-3|AGBL5'] 105597 7976 SVEFTRALEV True PC9_epitope_Rep4 1149.60298825673 1149.60188993586 38.125 2 -0.967353235809291 0.29111746298378466 1.0 ['ENST00000380241.7_1_X:16720981-16730968:-|nuORF'] 22349 20770 ETEKTKITI True PC9_epitope_Rep1 1061.5968402471299 1061.59574993586 84.719 2 -0.9673554084481983 0.29111746298378466 1.0 ['nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2'] 65873 4532 LSLAGAPH True NCI_RA007_Epitope_Rep4 764.41808803952 764.41698993586 23.828 2 -0.967358367178917 0.2911270658358169 1.0 ['ENST00000553607.1_1_16:30102588-30102927:-|nuORF'] 61928 12546 LLLLPGTLQ True NCI_RA007_Epitope_Rep4 966.61136811246 966.61026993586 55.274 2 -0.9673889676071946 0.2911304960312085 1.0 ['ENST00000590882.1_1_19:19459915-19460169:+|nuORF', 'ENST00000587709.5_1_19:19459678-19460169:+|nuORF', 'ENST00000587362.5_1_19:19458179-19460169:+|nuORF'] 66795 17292 LSVLKLACA True PC9_epitope_Rep5 916.5415743004799 916.54046993586 71.519 2 -0.9674072552125018 0.2911304960312085 1.0 ['ENST00000463814.1_1_7:143815556-143816108:-|nuORF', 'ENSG00000221938|ENST00000641068|OR2A14', 'ENSG00000221836|ENST00000641693|OR2A5', 'ENSG00000221989|ENST00000408979|OR2A2'] 23185 11897 EVPRIQLEK True NCI_RA007_Epitope_Rep1 1110.6397081186199 1110.6386099358601 50.26 2 -0.9674228352402363 0.2911304960312085 1.0 ['CGAS|p.E241K|1|0.3|ENSG00000164430|chr6:73445684-73445684|C/T|missense_variant'] 79401 5937 PGLSLLLFQAC True PC9_epitope_Rep4 1160.6263665536 1160.6252699358602 29.763 2 -0.9674288265267297 0.2911304960312085 1.0 ['ENST00000477917.5_1_2:220146297-220148118:+|nuORF'] 86332 9119 QQISLPELP True H1975_Epitope_Rep1 1023.5600608155898 1023.5589699358601 39.98 2 -0.9674314196232372 0.2911304960312085 1.0 ['PZP|p.I1373Sfs*13|1|0.39|ENSG00000126838|chr12:9152829-9152829|G/-|frameshift_variant', 'ENSG00000126838|ENST00000261336|PZP', 'nc|ENSG00000126838|P20742-2|PZP'] 28138 19372 FRKKKREQ True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 79.509 2 -0.967445746791388 0.2911304960312085 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 36507 9014 GVKGAKIK True PC9_epitope_Rep5 799.5279728416699 799.52686993586 39.618 2 -0.9675371135739412 0.29116718815609466 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 139214 18681 YSVISYLKKL True PC9_epitope_Rep5 1212.71181042972 1212.7107099358602 76.877 2 -0.9675490762520794 0.29117284535886984 1.0 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6', 'ENST00000493637.6_1_X:134704384-134704540:+|nuORF', 'ENST00000504674.1_1_5:39719945-39720791:-|nuORF', 'ENSG00000165359|ENST00000639893|INTS6L'] 93300 21269 RRRYLRRKER True NCI_RA007_Epitope_Rep2 1487.9021794369498 1487.90053490379 87.99 3 -0.9675498040648305 0.29117284535886984 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 106811 17786 SYGRIIVTV True PC9_epitope_Rep4 1006.58113061334 1006.58002993586 76.442 2 -0.9676013502794367 0.29119204670125015 1.0 ['ENSG00000166368|ENST00000299459|OR2D2'] 63023 9504 LNHNIPKGP True PC9_epitope_Rep1 988.5454138109599 988.54430993586 41.413 2 -0.9676401549626675 0.29119204670125015 1.0 ['ENSG00000204311|ENST00000644580|PJVK'] 22553 4107 ETLREHKFMGF True H1975_Epitope_Rep3 1393.68125566077 1393.68014993586 20.922 2 -0.9678283861705542 0.29125582403293965 1.0 ['ENST00000311936.7_1_12:25362125-25362311:-|nuORF'] 108279 5684 TEASRTHPSP True H1975_Epitope_Rep3 1081.5152358814898 1081.5141299358602 26.892 2 -0.9679662716264082 0.291275022347428 1.0 ['nc|ENSG00000162888|Q96MC9|IKBKE-AS1'] 20942 16482 EQVTLQDLSQL True PC9_epitope_Rep5 1272.6561460284 1272.65504993586 68.396 2 -0.967968528533536 0.291275022347428 1.0 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000478477.1_1_7:150775105-150776989:-|nuORF', 'ENST00000467237.5_1_7:150776545-150777049:-|nuORF', 'ENST00000482806.5_1_7:150774217-150777853:-|nuORF'] 131074 24304 VVLVIYLAPL True NCI_RA007_Epitope_Rep2 1098.7052684973 1098.7041699358601 102.07 2 -0.9680154959785815 0.29130776315076656 1.0 ['nc|ENSG00000130055|Q9HCC8-3|GDPD2', 'nc|ENSG00000130055|Q9HCC8-2|GDPD2', 'ENSG00000130055|ENST00000374382|GDPD2', 'ENST00000472623.1_1_X:69646726-69652182:+|nuORF'] 63006 9198 LNGGANIEA True PC9_epitope_Rep4 857.42429561877 857.42374496793 42.977 1 -0.9680166909362619 0.29130776315076656 1.0 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'ENST00000487258.5_1_7:91722364-91739470:+|nuORF', 'ENST00000463118.1_1_7:91729006-91736737:+|nuORF'] 66118 11072 LSNVLELGWE True H1975_Epitope_Rep3 1158.5920892198599 1158.59098993586 47.68 2 -0.9680318822300334 0.2913207751581057 1.0 ['ENST00000462680.5_1_1:153955110-153955269:-|nuORF'] 83862 7322 QEHERQVKWER True NCI_RA007_Epitope_Rep2 1523.7593227406699 1523.75822993586 33.102 2 -0.9681006466139825 0.2913207751581057 1.0 ['ENST00000587472.5_1_19:45572355-45572502:+|nuORF'] 138467 15983 YRFQRLQKKL True H1975_Epitope_Rep1 1378.8197381692596 1378.81864993586 66.81 2 -0.9681092298479469 0.2913207751581057 1.0 ['MYO5C|p.V891F|1|0.2|ENSG00000128833|chr15:52239765-52239765|C/A|missense_variant'] 90638 3472 RKKLILAK True PC9_epitope_Rep4 968.6858704653998 968.68476993586 19.427 2 -0.9681217777179428 0.2913207751581057 1.0 ['ENSG00000257315|ENST00000550078|ZBED6'] 31244 11400 GDPADDLVLR True H1975_Epitope_Rep1 1069.54038800017 1069.53928993586 48.83 2 -0.9681344388931352 0.2913207751581057 1.0 ['FCGBP|p.A1015V|1|0.17|ENSG00000275395|chr19:39914043-39914043|G/A|missense_variant'] 66293 7633 LSQGSPLSWE True NCI_RA007_Epitope_Rep2 1102.5294889632999 1102.52838993586 34.315 2 -0.9681720262441879 0.2913207751581057 1.0 ['chr6:53514497-53520778|456|17.54|0.99|4.15|-|ENST00000513939|GCLC,GCLC', 'ENSG00000001084|ENST00000650454|GCLC'] 58577 15968 LFEKKVYL True PC9_epitope_Rep1 1038.6113681124598 1038.61026993586 66.228 2 -0.9682102247729175 0.2913207751581057 1.0 ['ENSG00000122194|ENST00000308192|PLG'] 81677 1474 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 8.2904 3 -0.9684599285557672 0.29142516656735823 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 3736 16548 AGSVLFMKTGL True PC9_epitope_Rep4 1122.61071648946 1122.6096099358601 71.626 2 -0.9685926874530291 0.2914551091975033 1.0 ['ENST00000509141.5_1_16:29362989-29370611:+|nuORF'] 115642 9146 TVITVSNSFDK True PC9_epitope_Rep5 1209.62411762413 1209.62248490379 40.127 3 -0.9685935629572098 0.2914551091975033 1.0 ['ZBTB20|p.S452F|1|0.47|ENSG00000181722|chr3:114350723-114350723|G/A|missense_variant'] 45945 10759 ISSIFHPWMMK True H1975_Epitope_Rep1 1375.6780848566298 1375.67698993586 46.347 2 -0.9686108523912729 0.2914551091975033 1.0 ['ENST00000300403.10_1_20:30345217-30345373:+|nuORF'] 131471 24750 VVTVGVITVL True PC9_epitope_Rep4 998.6375828603 998.63703496793 103.7 1 -0.9686133094564704 0.2914551091975033 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 88628 5385 RAQGRWAQP True H1975_Epitope_Rep2 1068.5577098301599 1068.55660993586 25.75 2 -0.9686394032548312 0.2914551091975033 1.0 ['ENST00000572050.1_3_17:79211356-79212635:-|nuORF'] 134670 15741 WWNLRRTCFRI True NCI_RA007_Epitope_Rep2 1549.8088562157297 1549.80774993586 65.946 2 -0.9686679375283089 0.2914551091975033 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A'] 63244 15592 LPAFLPDCLDL True PC9_epitope_Rep4 1215.62094681999 1215.6193049037902 67.895 3 -0.9686909481913281 0.2914551091975033 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 42133 11144 IEERDAAL True PC9_epitope_Rep6 915.4661604307498 915.46506993586 53.817 2 -0.9687413093580648 0.2914551091975033 1.0 ['ENST00000556940.1_1_14:37777682-37838859:+|nuORF', 'ENST00000553349.1_1_14:37754581-37892775:+|nuORF', 'nc|ENSG00000151338|Q8TD10-2|MIPOL1', 'ENST00000554930.5_1_14:37667225-37854725:+|nuORF', 'MIPOL1|p.N375Hfs*10|1|0.17|ENSG00000151338|chr14:37499993-37499994|AG/-|frameshift_variant', 'ENSG00000151338|ENST00000684589|MIPOL1'] 2951 9231 AFGQPDNHGFG True H1975_Epitope_Rep1 1145.4890211336499 1145.4879299358602 40.416 2 -0.9687710544261463 0.2914551091975033 1.0 ['nc|ENSG00000157335|A5D8T8-2|CLEC18A', 'ENSG00000157335|ENST00000541793|CLEC18C', 'ENSG00000157322|ENST00000288040|CLEC18A', 'ENSG00000140839|ENST00000682950|CLEC18B'] 140150 15232 YVSTAAGP True PC9_epitope_Rep3 764.3704691407598 764.36936993586 63.739 2 -0.9687845606849851 0.2914551091975033 1.0 ['LILRB4|p.S231Y|1|0.18|ENSG00000186818|chr19:54664835-54664835|C/A|missense_variant'] 91006 18271 RLKHEHIERRR True NCI_RA007_Epitope_Rep3 1528.8811096391998 1528.88000993586 80.014 2 -0.9688148976124178 0.2914551091975033 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 135082 20424 YALLLAMYL True PC9_epitope_Rep1 1069.58819013973 1069.5870899358601 83.375 2 -0.9688222629352418 0.2914551091975033 1.0 ['OR1E2|p.F31L|1|0.25|ENSG00000127780|chr17:3433751-3433751|A/G|missense_variant'] 42690 11485 IEVVASAS True NCI_RA007_Epitope_Rep5 774.4123339527399 774.41122993586 50.826 2 -0.9688536729491716 0.2914551091975033 1.0 ['ENST00000484010.1_1_12:32101431-32101545:+|nuORF'] 12619 9758 DLEDKFLCFTS True NCI_RA007_Epitope_Rep1 1316.5958542709598 1316.5947499358601 41.958 2 -0.9689251625093155 0.29147994205331634 1.0 ['ENST00000559108.1_1_15:63354467-63358183:+|nuORF'] 56175 10378 LDNVQCRGTES True H1975_Epitope_Rep1 1220.5455500336 1220.54444993586 44.868 2 -0.9689617491488547 0.29147994205331634 1.0 ['ENST00000494979.1_1_2:119750668-119752093:+|nuORF', 'nc|ENSG00000019169|Q9UEW3-2|MARCO', 'ENSG00000019169|ENST00000327097|MARCO'] 15759 6422 EDEGQWGNPS True PC9_epitope_Rep1 1117.4312314740098 1117.4301299358601 29.509 2 -0.9689626079744497 0.29147994205331634 1.0 ['nc|ENSG00000121903|P17040-2|ZSCAN20', 'nc|ENSG00000121903|P17040-3|ZSCAN20', 'ENSG00000121903|ENST00000684572|ZSCAN20'] 120210 11623 VFLVSVPAAP True H1975_Epitope_Rep1 998.5800679841798 998.57896993586 49.699 2 -0.9689697059621838 0.29147994205331634 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 80393 11235 PLHSTLSV True PC9_epitope_Rep4 852.4705175352001 852.46942993586 50.991 2 -0.9690537720203772 0.2915166120603287 1.0 ['nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 87723 14611 QVEESFIY True H1975_Epitope_Rep2 1013.4705771048498 1013.46948993586 61.36 2 -0.969109201335108 0.29153974249624304 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|311|2|anti-sense'] 68571 16803 LTWWTRNCPL True PC9_epitope_Rep1 1288.6386625727998 1288.63756993586 69.457 2 -0.9692266815672598 0.29165764107007475 1.0 ['ENSG00000117834|ENST00000438567|SLC5A9', 'nc|ENSG00000117834|Q2M3M2-3|SLC5A9', 'nc|ENSG00000117834|Q2M3M2-2|SLC5A9'] 59176 13181 LGFLKHIRTQ True PC9_epitope_Rep2 1211.7138761183899 1211.71222490379 55.975 3 -0.969303811695255 0.2916672307588168 1.0 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG', 'ENST00000475012.5_1_3:62203523-62278979:+|nuORF'] 12769 16852 DLHLPMLEVP True PC9_epitope_Rep3 1162.6056311090201 1162.60452993586 69.974 2 -0.969368085088997 0.2917445103295156 1.0 ['ENST00000295759.11_1_2:220108341-220110088:-|nuORF'] 91007 18349 RLKHEHIERRR True NCI_RA007_Epitope_Rep3 1528.8811096391998 1528.88000993586 80.354 2 -0.9694498222712468 0.2917947121177251 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 79335 23414 PGKRLIDRIVE True PC9_epitope_Rep3 1294.7721192705 1294.77046490379 95.341 3 -0.9694703339138223 0.2918138867454548 1.0 ['ENSG00000124198|ENST00000371917|ARFGEF2'] 87980 8914 QVRDWSHYFKI True PC9_epitope_Rep5 1477.7466327986497 1477.74499490379 39.232 3 -0.9695297636807247 0.2918138867454548 1.0 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 1309 8109 AEDYFNVSL True PC9_epitope_Rep2 1056.47639076128 1056.47528993586 36.548 2 -0.9695367368286353 0.29182347366996075 1.0 ['nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1', 'ENSG00000254221|ENST00000523390|PCDHGB1'] 41725 9416 IDNLDTRLPRI True PC9_epitope_Rep2 1324.74629844548 1324.7446649037902 41.558 3 -0.9695416863402148 0.29183306033490813 1.0 ['ENSG00000152455|ENST00000354919|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-2|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-3|SUV39H2'] 75188 8577 NNPSIPAG True PC9_epitope_Rep1 768.37661715036 768.37606496793 37.828 1 -0.9695851121999371 0.2918426467403076 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1', 'RREB1|p.A584Gfs*8|1|0.14|ENSG00000124782|chr6:7229846-7229847|-/G|frameshift_variant', 'nc|ENSG00000124782|Q92766-6|RREB1'] 68929 17207 LVFRHAQDL True H1975_Epitope_Rep1 1097.5981776598098 1097.5970899358601 71.643 2 -0.9696131551808079 0.2918522328861695 1.0 ['ENSG00000168490|ENST00000454243|PHYHIP'] 86542 26089 QRAPKPLPRV True PC9_epitope_Rep3 1160.71421047156 1160.71310993586 106.29 2 -0.9696801952384483 0.29187872225230105 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 113402 12635 TQLLLWRW True NCI_RA007_Epitope_Rep2 1114.6287495120998 1114.62764993586 53.761 2 -0.9697184940472175 0.29187872225230105 1.0 ['ENST00000301335.9_1_17:1478030-1478219:-|nuORF'] 118392 12921 VDLENVWLHFI True NCI_RA007_Epitope_Rep1 1383.7186867153098 1383.7175899358601 54.252 2 -0.9697329603690895 0.29187872225230105 1.0 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2'] 12135 7720 DIIMMEDLP True NCI_RA007_Epitope_Rep3 1075.49296942555 1075.4918699358602 37.49 2 -0.969733218606445 0.29187872225230105 1.0 ['nc|ENSG00000179094|O15534-4|PER1', 'ENSG00000179094|ENST00000317276|PER1'] 111582 11407 TLNGFYAEAEK True H1975_Epitope_Rep1 1241.5928174958497 1241.59172993586 48.856 2 -0.9697489057391777 0.29187872225230105 1.0 ['ENSG00000155265|ENST00000370602|GOLGA7B'] 97382 14393 SGCGGPHG True NCI_RA007_Epitope_Rep2 670.24930846226 670.24875496793 60.65 1 -0.9697764867185495 0.29187872225230105 1.0 ['ENST00000591087.1_1_19:46144824-46145007:+|nuORF'] 35348 9823 GTAANSQSYTI True PC9_epitope_Rep3 1111.5145671751502 1111.51346993586 42.744 2 -0.9697850018506321 0.29187872225230105 1.0 ['nc|ENSG00000182872|P98175-2|RBM10', 'ENSG00000182872|ENST00000377604|RBM10', 'nc|ENSG00000182872|P98175-5|RBM10', 'nc|ENSG00000182872|P98175-4|RBM10', 'nc|ENSG00000182872|P98175-3|RBM10'] 58220 15399 LESTFKDPR True PC9_epitope_Rep1 1091.56112344475 1091.56002993586 64.051 2 -0.9698062280206117 0.2919114263284697 1.0 ['ENSG00000115421|ENST00000238714|PAPOLG', 'ENST00000453839.5_1_2:61014200-61024278:+|nuORF'] 1041 6236 AEAHYKGHK True NCI_RA007_Epitope_Rep2 1039.5199273391097 1039.5188299358601 28.864 2 -0.9698475239628354 0.2919114263284697 1.0 ['nc|ENSG00000187595|Q66K41|ZNF385C', 'ENSG00000187595|ENST00000692273|ZNF385C'] 11192 12360 DEKEYPHRR True PC9_epitope_Rep6 1228.5948831845199 1228.59378993586 58.946 2 -0.9699049409862974 0.2919131082087027 1.0 ['ENSG00000070501|ENST00000265421|POLB'] 85730 9480 QLSYNFTL True PC9_epitope_Rep2 984.4916469026 984.49054993586 41.806 2 -0.9699166667698716 0.2919131082087027 1.0 ['ENSG00000134007|ENST00000256389|ADAM20'] 137256 21897 YLFYNFEYWFL True NCI_RA007_Epitope_Rep1 1603.7387534535499 1603.7376499358602 89.661 2 -0.9699301538219499 0.2919131082087027 1.0 ['ENSG00000102805|ENST00000377453|CLN5'] 26557 8130 FIVSFCYKF True PC9_epitope_Rep4 1152.5677890483198 1152.56668993586 38.727 2 -0.969950697295094 0.2919164715594592 1.0 ['ENSG00000064763|ENST00000536681|FAR2', 'nc|ENSG00000064763|Q96K12-2|FAR2'] 104375 7898 SSGERWIRY True H1975_Epitope_Rep1 1152.5676058075198 1152.56650993586 35.332 2 -0.969955125945861 0.2919164715594592 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 18593 4808 ELAELDQWPQ True NCI_RA007_Epitope_Rep2 1227.57716743171 1227.5755349037902 23.329 3 -0.9699631399828892 0.2919164715594592 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 35150 5876 GSALAQLY True NCI_RA007_Epitope_Rep2 821.42831837005 821.4272299358599 27.475 2 -0.9699968517143789 0.2919164715594592 1.0 ['ENSG00000128655|ENST00000286063|PDE11A', 'nc|ENSG00000128655|Q9HCR9-4|PDE11A', 'nc|ENSG00000128655|Q9HCR9-3|PDE11A', 'nc|ENSG00000128655|Q9HCR9-2|PDE11A', 'ENST00000497003.5_1_2:178552959-178791632:-|nuORF', 'NFE2L2-PDE11A|3|fusion', 'NFE2L2-PDE11A|1|fusion', 'NFE2L2-PDE11A|2|fusion'] 828 16175 ADDPEAVIY True H1975_Epitope_Rep3 991.4498416602698 991.4492949679301 67.674 1 -0.9699987948306675 0.2919164715594592 1.0 ['nc|ENSG00000197444|Q9ULD0-3|OGDHL', 'nc|ENSG00000197444|Q9ULD0-2|OGDHL', 'ENSG00000197444|ENST00000374103|OGDHL'] 121171 11791 VGGKSGLF True PC9_epitope_Rep4 763.42283906679 763.42174993586 53.123 2 -0.9700334654817955 0.2919164715594592 1.0 ['nc|ENSG00000179454|Q9NXS3-2|KLHL28', 'ENSG00000179454|ENST00000396128|KLHL28'] 70008 21116 LYGFDVLID True PC9_epitope_Rep4 1053.5382627418498 1053.53767496793 89.385 1 -0.9700629170818574 0.2919412680154273 1.0 ['TTLL5-RGS6|2|fusion', 'TTLL5-RGS6|5|fusion', 'TTLL5-RGS6|1|fusion', 'TTLL5-RGS6|8|fusion', 'TTLL5-RGS6|4|fusion', 'TTLL5-RGS6|6|fusion', 'TTLL5-RGS6|7|fusion', 'TTLL5-RGS6|3|fusion', 'ENSG00000119685|ENST00000298832|TTLL5', 'TTLL5|p.I678Sfs*12|1|0.11|ENSG00000119685|chr14:75771750-75771756|ATAGCAT/-|frameshift_variant', 'ENST00000555422.5_1_14:76198560-76243086:+|nuORF'] 99207 12397 SLAVFIKR True PC9_epitope_Rep1 932.5807366905199 932.5801849679301 52.546 1 -0.9701383975147031 0.2919412680154273 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 91035 20435 RLKTAAAAAA True PC9_epitope_Rep6 942.5610638750998 942.55996993586 91.311 2 -0.9701683091321196 0.2919412680154273 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 100246 13834 SLLQKEDL True PC9_epitope_Rep2 944.5178616504398 944.51676993586 58.496 2 -0.9701689268915895 0.2919412680154273 1.0 ['POLQ|p.N2068D|1|0.34|ENSG00000051341|chr3:121481581-121481581|T/C|missense_variant'] 63614 21171 LPLRENKRVP True H1975_Epitope_Rep2 1220.73533983896 1220.7342499358601 87.628 2 -0.9702295784919083 0.2919508498430226 1.0 ['EIF3L-TRIOBP|1|fusion', 'EIF3L-TRIOBP|2|fusion', 'EIF3L-TRIOBP|3|fusion', 'EIF3L-TRIOBP|5|fusion', 'nc|ENSG00000100106|Q9H2D6-3|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-5|TRIOBP', 'EIF3L-TRIOBP|4|fusion', 'EIF3L-TRIOBP|6|fusion', 'ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP'] 6564 5588 APVSGGVGA True PC9_epitope_Rep5 713.37080349393 713.37025496793 26.497 1 -0.9702321600576121 0.29195648055427753 1.0 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 96648 19031 SENLQVKLV True PC9_epitope_Rep3 1028.5866099165999 1028.58550993586 78.423 2 -0.9702366530804066 0.29195648055427753 1.0 ['ENSG00000196793|ENST00000374446|ZNF239'] 45392 14539 ISDQEKEKEKE True PC9_epitope_Rep5 1361.6674389880898 1361.66578490379 60.922 3 -0.9702739484046232 0.29195816024140403 1.0 ['ENSG00000155761|ENST00000336338|SPAG17'] 78795 10453 PELPAQKR True PC9_epitope_Rep3 937.53451477409 937.53340993586 45.146 2 -0.9702779084985107 0.29195816024140403 1.0 ['ENSG00000142698|ENST00000488417|C1orf94', 'nc|nan|Q6P1W5-2|C1orf94'] 30415 14251 GAFSESIFASL True PC9_epitope_Rep1 1127.54989005471 1127.5487899358602 59.641 2 -0.970285085140587 0.29195816024140403 1.0 ['ENST00000343855.5_1_7:150028109-150028460:+|nuORF'] 52977 7033 KRPLWTRMS True NCI_RA007_Epitope_Rep1 1173.6440823064102 1173.6429899358602 31.353 2 -0.9704084220581412 0.2919846295394274 1.0 ['ENST00000463625.6_1_9:37327797-37354732:+|nuORF'] 53173 16247 KSRTRWIHSQI True PC9_epitope_Rep3 1410.7844152896998 1410.7833099358602 67.632 2 -0.9704428064847481 0.2919846295394274 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|56|2|sense'] 46004 5576 ISTVELQK True NCI_RA007_Epitope_Rep3 916.5229470308799 916.52184993586 28.926 2 -0.9704457646625813 0.2919846295394274 1.0 ['ENSG00000164180|ENST00000296595|TMEM161B', 'ENST00000510089.5_1_5:87494777-87494978:-|nuORF'] 107600 4144 TAGHLPCPPP True H1975_Epitope_Rep2 988.4800366730799 988.47892993586 21.034 2 -0.9704468347772688 0.2919846295394274 1.0 ['PROP1|p.P202T|1|0.32|ENSG00000175325|chr5:177992786-177992786|G/T|missense_variant'] 128685 8478 VSNEQEVLR True H1975_Epitope_Rep1 1072.5512870370399 1072.55018993586 37.54 2 -0.97046400606843 0.2919846295394274 1.0 ['nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENSG00000101745|ENST00000262126|ANKRD12'] 62603 12050 LLVGLSLGVP True H1975_Epitope_Rep2 966.6113681124599 966.61026993586 51.43 2 -0.9704829826120689 0.2919846295394274 1.0 ['EDIL3|p.K429*|1|0.21|ENSG00000164176|chr5:83963209-83963213|TCTTT/-|frameshift_variant', 'nc|ENSG00000164176|O43854-2|EDIL3', 'ENSG00000164176|ENST00000296591|EDIL3', 'EDIL3|p.G131Vfs*72|2|0.31|ENSG00000164176|chr5:84137318-84137318|C/-|frameshift_variant'] 10570 5770 CQVSQMPENTF True NCI_RA007_Epitope_Rep4 1282.5322084685797 1282.53110993586 28.814 2 -0.9704980883723114 0.2919846295394274 1.0 ['ENST00000318220.10_1_1:21793573-21793636:+|nuORF'] 60765 24558 LKENAALLTA True PC9_epitope_Rep4 1042.60225998074 1042.60116993586 102.95 2 -0.9705558222111574 0.2919998376425701 1.0 ['ENSG00000171992|ENST00000307662|SYNPO', 'nc|ENSG00000171992|Q8N3V7-3|SYNPO', 'nc|ENSG00000171992|Q8N3V7|SYNPO'] 58895 12955 LFTRYAESKP True NCI_RA007_Epitope_Rep2 1210.63462273818 1210.63352993586 55.015 2 -0.970556462728743 0.2919998376425701 1.0 ['ENST00000226317.9_1_4:74702714-74702762:+|nuORF'] 67587 5457 LTETHKC[Carbamidomethyl]FL True NCI_RA007_Epitope_Rep2 1147.5695802329 1147.56848993586 25.845 2 -0.9706040392712693 0.2919998376425701 1.0 ['ENSG00000155816|ENST00000319653|FMN2', 'nc|ENSG00000155816|Q9NZ56-2|FMN2'] 91380 13173 RMTTERDSL True PC9_epitope_Rep5 1107.5342570739099 1107.5331499358601 55.674 2 -0.9707003896318054 0.2920437788330154 1.0 ['ACTR2-TSGA10|1|fusion', 'ENSG00000135951|ENST00000393483|TSGA10', 'nc|ENSG00000135951|Q9BZW7-2|TSGA10', 'ENST00000478090.5_1_2:99689501-99743552:-|nuORF'] 103232 20740 SQRWRLQLRRR True NCI_RA007_Epitope_Rep5 1553.9127441206497 1553.9110949037902 86.75 3 -0.9707105218185952 0.2920437788330154 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 14479 9744 DTTMLHKLNS True H1975_Epitope_Rep1 1158.57030822946 1158.56920993586 42.41 2 -0.9707208114585786 0.2920437788330154 1.0 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'nc|ENSG00000137474|Q13402-3|MYO7A', 'nc|ENSG00000137474|Q13402-4|MYO7A'] 91009 18519 RLKHEHIERRR True NCI_RA007_Epitope_Rep3 1528.8811096391998 1528.88000993586 81.036 2 -0.9707234064398395 0.2920437788330154 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 77949 26743 PAKVWGIC True PC9_epitope_Rep2 872.4578446765198 872.45674993586 109.74 2 -0.9707348499505971 0.2920437788330154 1.0 ['ENST00000354179.8_2_5:176721804-176722098:+|nuORF'] 20545 12555 EQAQQIRLQAE True H1975_Epitope_Rep3 1312.6735274280397 1312.67242993586 53.492 2 -0.9707564596469843 0.2920437788330154 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 63016 6445 LNGTKPVPP True H1975_Epitope_Rep3 921.5283667644899 921.52726993586 29.765 2 -0.9707648140055393 0.2920533564219811 1.0 ['ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4-2|TOGARAM1', 'ENST00000555607.1_1_14:45431624-45475488:+|nuORF', 'nc|ENSG00000198718|Q9Y4F4-3|TOGARAM1'] 44742 14753 IPRPETEEL True PC9_epitope_Rep5 1082.56078909158 1082.56027496793 61.747 1 -0.9707990288039742 0.2920899903948917 1.0 ['ENSG00000114735|ENST00000232854|HEMK1', 'ENST00000448997.5_1_3:50608680-50617422:+|nuORF'] 122377 11356 VGSFDIAG True PC9_epitope_Rep3 764.37046914076 764.36936993586 48.684 2 -0.9708496974268015 0.29209561558961594 1.0 ['ENSG00000104969|ENST00000221566|SGTA'] 18222 7270 EIRRMHDFNRD True NCI_RA007_Epitope_Rep1 1487.7051789928298 1487.70352490379 32.269 3 -0.9709064308118057 0.29209561558961594 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 122328 11861 VGRWSLQRTRE True H1975_Epitope_Rep3 1386.7480297809796 1386.7469299358602 50.772 2 -0.9709945512085947 0.292132247504126 1.0 ['ENST00000565149.5_1_16:88718476-88718593:-|nuORF'] 714 11267 AAVLNTTLH True PC9_epitope_Rep4 938.51853035678 938.51742993586 51.115 2 -0.9710072994778733 0.29214182324851534 1.0 ['ENST00000437420.5_1_2:207078065-207082099:-|nuORF', 'ENST00000407325.6_1_2:207078065-207082592:-|nuORF', 'ENST00000451790.5_2_2:207078065-207078338:-|nuORF'] 98486 12729 SILAFIDNFQ True H1975_Epitope_Rep2 1166.5971746003 1166.5960699358602 54.065 2 -0.9710363355974907 0.29214744673655735 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 33994 11051 GNGTTNQGIAP True PC9_epitope_Rep1 1028.4886867804798 1028.4875899358601 47.396 2 -0.9710480994656147 0.29214744673655735 1.0 ['nc|ENSG00000136144|Q8NDN9-2|RCBTB1', 'ENSG00000136144|ENST00000378302|RCBTB1'] 36197 15433 GVFREFWEFRT True NCI_RA007_Epitope_Rep2 1472.7200836976394 1472.71898993586 64.731 2 -0.9711025621919009 0.2921705489273057 1.0 ['nc|ENSG00000136449|Q8TBZ2|MYCBPAP', 'ENSG00000136449|ENST00000323776|MYCBPAP'] 44731 13862 IPQREKTV True PC9_epitope_Rep5 969.5607295219299 969.55962993586 58.341 2 -0.9711833516976855 0.29222632525801784 1.0 ['ENST00000475200.5_1_10:103113883-103221786:+|nuORF'] 110503 8296 TIQEMQQKLE True NCI_RA007_Epitope_Rep3 1246.62273772514 1246.6216499358602 39.754 2 -0.9711841941400869 0.29222632525801784 1.0 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF'] 21947 7150 ESKMVIRN True H1975_Epitope_Rep3 975.51715045779 975.51604993586 32.474 2 -0.9711982385859704 0.29222632525801784 1.0 ['ENSG00000143344|ENST00000360851|RGL1', 'nc|ENSG00000143344|Q9NZL6-2|RGL1'] 122383 8777 VGSFRERSR True NCI_RA007_Epitope_Rep3 1092.57883919756 1092.57774993586 41.613 2 -0.9712328222018538 0.29223589882321116 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 23156 7918 EVNRLTEST True PC9_epitope_Rep4 1047.51965255559 1047.5185499358602 37.887 2 -0.9712491595313613 0.2922415192338906 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 52121 23185 KLRSATASRRG True PC9_epitope_Rep2 1201.7003513125699 1201.69924993586 94.666 2 -0.9712737627773377 0.2922415192338906 1.0 ['ENSG00000162302|ENST00000334205|RPS6KA4', 'nc|ENSG00000162302|O75676-2|RPS6KA4'] 139077 11677 YSLLVKNI True NCI_RA007_Epitope_Rep3 948.56441792004 948.56332993586 53.05 2 -0.9713390475732725 0.2922798095650292 1.0 ['HGSNAT-AGPAT6|1|fusion', 'nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT'] 4521 8447 AKPKVEDEAP True H1975_Epitope_Rep1 1082.5607890915799 1082.5596899358602 37.419 2 -0.9713555419887604 0.2922798095650292 1.0 ['nc|ENSG00000166689|Q6IQ23|PLEKHA7', 'ENSG00000166689|ENST00000531066|PLEKHA7'] 128947 12119 VSVFSWDNEK True H1975_Epitope_Rep1 1209.56660274801 1209.56550993586 51.631 2 -0.9713884127957191 0.2922798095650292 1.0 ['ENSG00000127423|ENST00000374298|AUNIP', 'nc|ENSG00000127423|Q9H7T9-2|AUNIP'] 114614 7693 TSMMLLTV True PC9_epitope_Rep5 894.4554617180199 894.45436993586 34.535 2 -0.9714560218722166 0.2922798095650292 1.0 ['ENSG00000178449|ENST00000550487|COX14'] 30630 5658 GALDGEPRPGP True NCI_RA007_Epitope_Rep5 1064.5250722892 1064.5239699358601 28.452 2 -0.9716023182106083 0.2924071519381103 1.0 ['ENST00000263083.10_1_17:1944800-1946395:+|nuORF'] 72323 5660 MSSLFLSPPNQ True NCI_RA007_Epitope_Rep2 1219.59070932087 1219.58905490379 26.631 3 -0.9716088622620316 0.2924071519381103 1.0 ['ENST00000541507.1_12:9094188-9094401:-|nuORF'] 3398 23305 AGIYRKREEK True PC9_epitope_Rep1 1248.6938689498 1248.69276993586 94.431 2 -0.9716893154799249 0.2924167218923707 1.0 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A', 'ENST00000413684.1_1_2:91935968-91936997:-|nuORF'] 44106 4925 ILMLNMGGP True PC9_epitope_Rep1 944.4823451721999 944.48124993586 23.808 2 -0.9718182300515847 0.2925209629429267 1.0 ['ENST00000592111.1_1_18:55240476-55253852:-|nuORF', 'ENST00000585878.1_1_18:55240476-55253852:-|nuORF', 'ENSG00000066926|ENST00000262093|FECH', 'nc|ENSG00000066926|P22830-2|FECH'] 82889 7614 PVWDYSHLM True PC9_epitope_Rep4 1146.51681610462 1146.51517490379 36.668 3 -0.9718414016964196 0.29252261877392044 1.0 ['PWWP3B|p.S335I|1|0.92|ENSG00000157502|chrX:106206436-106206436|G/T|missense_variant', 'ENSG00000157502|ENST00000357175|PWWP3B'] 15661 14182 ECDDCDSC True PC9_epitope_Rep6 888.1935696015601 888.19246993586 66.431 2 -0.9718914415514336 0.29252261877392044 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 83844 4870 QEGCSDRDLIW True H1975_Epitope_Rep3 1320.57685016188 1320.57520490379 23.859 3 -0.9719008059414181 0.29252261877392044 1.0 ['nc|ENSG00000148384|Q9NRR6-2|INPP5E'] 19346 12968 ELNFRSNKNVW True NCI_RA007_Epitope_Rep1 1405.71024728993 1405.70914993586 54.433 2 -0.9720293729825952 0.2925513212344143 1.0 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 108683 9901 TELREMLNSRR True H1975_Epitope_Rep1 1403.7303311115097 1403.72922993586 43.02 2 -0.9720477417229897 0.2925513212344143 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'ENST00000466474.5_1_21:47766077-47773062:+|nuORF', 'PCNT|p.D659Gfs*18|1|0.23|ENSG00000160299|chr21:46357008-46357009|-/G|frameshift_variant', 'ENST00000490468.5_1_21:47766659-47767371:+|nuORF', 'PCNT|p.G1782Afs*21|1|0.22|ENSG00000160299|chr21:46411414-46411414|G/-|frameshift_variant'] 42824 14272 IFKREKEV True PC9_epitope_Rep4 1047.6076797143498 1047.60658993586 62.8 2 -0.9720653197089812 0.2925513212344143 1.0 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.A4607S|1|0.34|ENSG00000198626|chr1:237793903-237793903|G/T|missense_variant', 'ENST00000608590.5_1_1:237955470-237994843:+|nuORF'] 6197 5362 APQRLPQT True PC9_epitope_Rep5 909.5032146458099 909.50210993586 25.64 2 -0.9720901529683883 0.29256088820371345 1.0 ['nc|ENSG00000120341|Q96JE7-2|SEC16B', 'ENSG00000120341|ENST00000308284|SEC16B', 'ENST00000464428.2_1_1:177930716-177937161:-|nuORF', 'ENST00000466953.6_1_1:177929778-177937161:-|nuORF'] 91666 4122 RPFYTEWWRE True NCI_RA007_Epitope_Rep1 1468.6887835693599 1468.68712490379 20.108 3 -0.9721216575347074 0.29259750094661113 1.0 ['ENST00000292599.3_1_5:179203171-179203312:+|nuORF'] 7305 18365 ARRKELEEKMV True H1975_Epitope_Rep1 1387.76056861063 1387.7594699358601 76.537 2 -0.972138311709969 0.2926070670326847 1.0 ['ENSG00000006788|ENST00000252172|MYH13', 'ENSG00000092054|ENST00000355349|MYH7', 'ENSG00000197616|ENST00000405093|MYH6'] 99405 6406 SLEECYMAKI True NCI_RA007_Epitope_Rep1 1185.54098224713 1185.5398899358602 28.943 2 -0.9722031333207299 0.29263015551048005 1.0 ['ENST00000533297.1_1_11:111896132-111933256:+|nuORF', 'ENSG00000150768|ENST00000280346|DLAT'] 78389 22795 PAVMRAFRKNK True PC9_epitope_Rep4 1316.7499443572794 1316.74937496793 95.902 1 -0.9722738774022284 0.29268028829900883 1.0 ['ENSG00000133983|ENST00000389912|COX16'] 2883 13511 AEYSLREKL True PC9_epitope_Rep3 1107.59242357303 1107.5913299358601 57.02 2 -0.9722798404822897 0.2926819374205587 1.0 ['nc|ENSG00000134900|P29144|TPP2', 'ENSG00000134900|ENST00000376052|TPP2'] 78334 14791 PASWVQRRLR True H1975_Epitope_Rep1 1267.7261721375899 1267.7250699358601 62.118 2 -0.972285738927378 0.2926819374205587 1.0 ['ENST00000450185.5_1_2:73228706-73298794:-|nuORF'] 13484 4800 DPEACDKETGR True PC9_epitope_Rep1 1219.51391555215 1219.51280993586 23.332 2 -0.9722893095326269 0.2926819374205587 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 91479 8116 RNTVLLMYFFP True H1975_Epitope_Rep1 1399.7322286044696 1399.73059490379 36.162 3 -0.9723751276402749 0.292691501588804 1.0 ['ENST00000309922.6_1_3:101284860-101285061:+|nuORF'] 8116 10376 ATERKSVL True PC9_epitope_Rep5 902.5185303567799 902.51742993586 44.896 2 -0.9723811527104357 0.29269710777884445 1.0 ['ENST00000514473.2_1_14:22849590-22849821:-|nuORF'] 100212 15336 SLLLKDHIL True PC9_epitope_Rep1 1050.6437308699 1050.6426299358602 63.809 2 -0.972385011705921 0.29269710777884445 1.0 ['ENST00000471841.5_1_3:179066694-179069717:+|nuORF'] 70489 15646 LYSRFKAH True PC9_epitope_Rep3 1020.5504991913999 1020.54940993586 65.329 2 -0.9723896116893121 0.29270667135401174 1.0 ['ENSG00000168438|ENST00000307731|CDC40', 'ENST00000606893.5_1_6:110533295-110551331:+|nuORF'] 133904 14771 WNFSKPESLL True PC9_epitope_Rep4 1219.62372370131 1219.62262993586 64.749 2 -0.9724156607164952 0.2927297556754418 1.0 ['PEX7|p.D276E|1|0.22|ENSG00000112357|chr6:136898166-136898166|C/G|missense_variant'] 82410 18767 PVALSTPAL True PC9_epitope_Rep6 867.50656869075 867.50546993586 84.826 2 -0.9725386102525964 0.2927307385526369 1.0 ['ENST00000433126.1_1_20:61296516-61296777:-|nuORF'] 84506 5260 QGSLASLEAEQ True NCI_RA007_Epitope_Rep5 1131.54078192299 1131.53968993586 26.928 2 -0.9725475521908679 0.2927307385526369 1.0 ['ENSG00000163820|ENST00000296137|FYCO1', 'nc|ENSG00000163820|Q9BQS8-4|FYCO1'] 131790 17112 VYAILTHGI True PC9_epitope_Rep4 985.5596668927699 985.55856993586 73.825 2 -0.9725654554661501 0.2927307385526369 1.0 ['nc|ENSG00000147224|P60891-2|PRPS1', 'ENSG00000229937|ENST00000506618|PRPS1L1', 'ENSG00000147224|ENST00000372435|PRPS1', 'ENSG00000101911|ENST00000380668|PRPS2', 'nc|ENSG00000101911|P11908-2|PRPS2'] 77669 23922 PAAAAAATTT True PC9_epitope_Rep2 844.4290466460401 844.4284949679301 97.495 1 -0.9725899819550724 0.2927307385526369 1.0 ['ENSG00000188613|ENST00000425699|NANOS1'] 19785 9825 ELTHIQLGV True PC9_epitope_Rep2 1008.56039516876 1008.55928993586 43.127 2 -0.9725972033819147 0.2927307385526369 1.0 ['ENST00000567409.1_1_16:31368426-31368879:+|nuORF'] 47147 15330 IWNTFFHERYL True PC9_epitope_Rep1 1524.7513838259201 1524.74917987172 63.786 4 -0.9726029101466219 0.2927307385526369 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 16707 9628 EEVRHFSPRGK True NCI_RA007_Epitope_Rep1 1340.6949315789595 1340.69329490379 41.449 3 -0.9726111447861047 0.2927307385526369 1.0 ['ENSG00000164776|ENST00000297373|PHKG1', 'nc|ENSG00000164776|Q16816-2|PHKG1'] 22863 13711 EVERDFASVYS True H1975_Epitope_Rep2 1300.59354577184 1300.59244993586 57.882 2 -0.972625512509984 0.2927307385526369 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000470518.5_1_22:40803281-40805023:+|nuORF', 'ENST00000478085.5_1_22:40803992-40804918:+|nuORF'] 54936 12071 LAGVKKDI True PC9_epitope_Rep4 842.5225531080599 842.52144993586 54.237 2 -0.9726772339552676 0.2927307385526369 1.0 ['ENSG00000097046|ENST00000234626|CDC7'] 31840 8054 GENVEALRNLS True PC9_epitope_Rep1 1200.6098645423199 1200.6087699358602 35.801 2 -0.972693054874162 0.2927307385526369 1.0 ['ABCA5|p.Y1038Lfs*45|1|0.17|ENSG00000154265|chr17:69267971-69267974|AAGT/-|frameshift_variant', 'nc|ENSG00000154265|Q8WWZ7-2|ABCA5', 'ENSG00000154265|ENST00000392676|ABCA5'] 19422 12540 ELPKNDLI True PC9_epitope_Rep2 940.5229470308799 940.52184993586 53.54 2 -0.9727895508363374 0.29277689905503507 1.0 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 134244 20072 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 84.142 2 -0.9727917021388829 0.29277689905503507 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 67798 14388 LTHSGDKPF True PC9_epitope_Rep4 1000.4977949122 1000.49668993586 63.253 2 -0.9728126714091361 0.29278645974152384 1.0 ['nc|ENSG00000139154|Q6ZN18|AEBP2', 'ENSG00000139154|ENST00000266508|AEBP2', 'nc|ENSG00000139154|Q6ZN18-3|AEBP2'] 134154 15105 WRHKLIHCVGP True PC9_epitope_Rep2 1344.72372960944 1344.7226299358601 63.359 2 -0.9728398982746328 0.2927920620758645 1.0 ['ENST00000540664.5_1_10:98592059-98593206:+|nuORF'] 45664 2545 ISIVYRYP True PC9_epitope_Rep6 1009.5596668927699 1009.55856993586 14.717 2 -0.9728475214707977 0.2927920620758645 1.0 ['nc|ENSG830|Q9HDB8|ERVK-5_env'] 68211 18320 LTQLHSCFQTM True PC9_epitope_Rep5 1307.6002284587498 1307.59858490379 75.482 3 -0.972875807159045 0.29279930791170466 1.0 ['ADCY9-PRKCB|2|fusion', 'nc|ENSG00000166501|P05771|PRKCB', 'ADCY9-PRKCB|1|fusion', 'PRKCB|p.G537Wfs*6|1|0.14|ENSG00000166501|chr16:24185184-24185185|-/T|frameshift_variant', 'ENSG00000166501|ENST00000643927|PRKCB'] 78343 21235 PATGTFKAKAL True PC9_epitope_Rep5 1103.6338944621898 1103.63278993586 86.73 2 -0.9729099590686416 0.29279930791170466 1.0 ['nc|ENSG00000179094|O15534-4|PER1', 'ENSG00000179094|ENST00000317276|PER1'] 65533 4996 LSGAINEK True NCI_RA007_Epitope_Rep1 830.44978209062 830.44868993586 23.516 2 -0.9729224499459451 0.29279930791170466 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9'] 84045 9982 QEPVLMYYRQ True PC9_epitope_Rep5 1325.64380752289 1325.64270993586 43.371 2 -0.9729351303264901 0.29279930791170466 1.0 ['ENST00000450376.1_1_22:38284470-38284539:+|nuORF'] 54965 12799 LAIAGTLK True PC9_epitope_Rep1 785.50108938749 785.49998993586 54.105 2 -0.9729372583907521 0.29279930791170466 1.0 ['ENSG00000100412|ENST00000216254|ACO2'] 88826 11227 RDVGSADLAL True PC9_epitope_Rep5 1015.5298233164698 1015.52872993586 48.174 2 -0.9730148527098524 0.2928359015950257 1.0 ['ZNF488|p.E73D|1|0.17|ENSG00000265763|chr10:47368611-47368611|C/A|missense_variant'] 64284 15939 LQLRWQEYREL True H1975_Epitope_Rep1 1532.8099613312 1532.80886993586 66.62 2 -0.9730232247639107 0.2928454603208932 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 31325 8215 GEAGSRIPGL True PC9_epitope_Rep6 955.5086939490699 955.50758993586 41.174 2 -0.9730909797673872 0.2928955691925063 1.0 ['ENSG00000203837|ENST00000369230|PNLIPRP3'] 18100 15334 EILDLLCPSLE True PC9_epitope_Rep5 1243.6369908069498 1243.6358899358602 63.992 2 -0.9730984141310007 0.2929051268534663 1.0 ['KIF4B|p.R156L|2|0.5|ENSG00000226650|chr5:155014326-155014326|G/T|missense_variant'] 42861 6627 IFQINSFAWCR True H1975_Epitope_Rep3 1383.67577635751 1383.67414490379 30.443 3 -0.9731677992346347 0.2929282006920415 1.0 ['LYZL1|p.G190Rfs*3|1|0.25|ENSG00000120563|chr10:29311035-29311036|-/A|frameshift_variant', 'ENSG00000120563|ENST00000649382|LYZL1', 'nc|ENSG00000120563|Q6UWQ5-2|LYZL1', 'ENSG00000151033|ENST00000647634|LYZL2', 'nc|ENSG00000151033|Q7Z4W2-2|LYZL2'] 99230 6936 SLCLHSGDQE True PC9_epitope_Rep2 1087.46042342731 1087.45932993586 32.08 2 -0.9731789621374018 0.2929298390257748 1.0 ['ENSG00000204687|ENST00000377127|MAS1L'] 124022 1993 VKLQKKHYK True NCI_RA007_Epitope_Rep1 1170.7237125260997 1170.7220549037902 10.493 3 -0.9731880428396424 0.2929298390257748 1.0 ['nc|ENSG00000182621|Q9NQ66-2|PLCB1', 'ENSG00000182621|ENST00000338037|PLCB1'] 19351 10720 ELNGQRGLVP True PC9_epitope_Rep1 1081.58800689893 1081.5869099358601 46.123 2 -0.97320870362981 0.2929298390257748 1.0 ['nc|ENSG00000005379|O95153-2|TSPOAP1', 'ENSG00000005379|ENST00000343736|TSPOAP1', 'nc|ENSG00000005379|O95153-3|TSPOAP1'] 73324 7571 NELFSHEIQP True H1975_Epitope_Rep1 1212.5775017848798 1212.57640993586 34.112 2 -0.9732151234015718 0.29293543634864644 1.0 ['PNPLA6|p.D881Tfs*24|1|0.35|ENSG00000032444|chr19:7554696-7554696|G/-|frameshift_variant', 'ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 126150 25092 VPFLELIG True PC9_epitope_Rep5 886.5164050984599 886.51530993586 101.66 2 -0.9732332252947842 0.29293543634864644 1.0 ['ENSG00000177150|ENST00000651643|FAM210A'] 10831 6490 DAGTYHCTAA True H1975_Epitope_Rep2 1008.3970948947599 1008.39598993586 29.88 2 -0.9734634305641061 0.293012569266117 1.0 ['ENSG00000162729|ENST00000314485|IGSF8', 'nc|ENSG00000162729|Q969P0-3|IGSF8'] 115415 17535 TVEYRPII True PC9_epitope_Rep4 989.5545815123298 989.55348993586 75.461 2 -0.9735641955935354 0.2930761849414118 1.0 ['ENST00000455183.1_1_3:195408438-195412772:+|nuORF', 'ENST00000440850.5_1_3:195690208-195698253:-|nuORF'] 118190 8883 VAVVAHGP True PC9_epitope_Rep3 748.4231734199599 748.42206993586 39.118 2 -0.9735807445529542 0.2930817780060276 1.0 ['ENSG00000130147|ENST00000392011|SH3BP4', 'nc|ENSG00000130147|Q9P0V3-2|SH3BP4'] 36271 8729 GVGLNTTI True NCI_RA007_Epitope_Rep3 773.4283183700501 773.4272299358599 41.426 2 -0.97358401243289 0.2930817780060276 1.0 ['ENST00000473378.1_1_X:70331248-70331389:-|nuORF', 'ENST00000276110.6_1_X:70331245-70331389:-|nuORF', 'ENST00000512747.3_1_X:70329223-70331389:-|nuORF', 'IL2RG|p.C362Mfs*7|1|0.11|ENSG00000147168|chrX:71107763-71107764|-/G|frameshift_variant', 'ENSG00000147168|ENST00000374202|IL2RG'] 112292 15540 TLYYQRRQRHR True H1975_Epitope_Rep1 1575.84947515775 1575.84836993586 65.053 2 -0.9736457433029105 0.29308737076829516 1.0 ['ENSG00000066422|ENST00000312938|ZBTB11'] 6993 14350 AQQIAYEI True PC9_epitope_Rep2 934.47599683846 934.47544496793 60.459 1 -0.973649118874958 0.29308737076829516 1.0 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'nc|ENSG00000170471|Q86X10-2|RALGAPB'] 107878 22199 TASVSLLI True H1975_Epitope_Rep2 802.48001958974 802.47892993586 91.742 2 -0.9736730465077531 0.29309296322823897 1.0 ['PCDHA10|p.G223A|1|0.15|ENSG00000250120|chr5:140856716-140856716|G/C|missense_variant'] 45277 6548 ISAANHVNA True PC9_epitope_Rep1 895.45117907295 895.45008993586 29.992 2 -0.9736843874551282 0.29309296322823897 1.0 ['PDE3A|p.K506N|1|0.1|ENSG00000172572|chr12:20621389-20621389|G/T|missense_variant'] 126214 8166 VPGSPCLD True NCI_RA007_Epitope_Rep5 786.3581902049 786.35708993586 38.094 2 -0.9738065096386712 0.2931565717992378 1.0 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1'] 119506 4742 VEQMVIC[Carbamidomethyl]DQIK True NCI_RA007_Epitope_Rep2 1361.6683082979996 1361.66720993586 23.075 2 -0.9739273815541583 0.2931931512588008 1.0 ['SLC4A2|p.S408C|2|0.27|ENSG00000164889|chr7:151070022-151070022|C/G|missense_variant'] 122883 16465 VGVPTRAR True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50808496793 70.092 1 -0.9740105208234827 0.2932027027027027 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 93786 16180 RTVLQTRYTLL True H1975_Epitope_Rep1 1362.7983340183398 1362.79722993586 67.582 2 -0.9740334088729172 0.2932257672193619 1.0 ['nc|ENSG00000257335|O43451-1|MGAM', 'MGAM|p.I1650Rfs*19|1|0.12|ENSG00000257335|chr7:142096359-142096360|AT/-|frameshift_variant', 'ENSG00000257335|ENST00000475668|MGAM', 'ENST00000485078.1_1_7:141794591-141795514:+|nuORF'] 32645 24875 GHGYLGIL True PC9_epitope_Rep3 828.4493881678 828.44828993586 101.06 2 -0.9741077503029367 0.29323135548558843 1.0 ['DAGLA|p.R60H|1|0.3|ENSG00000134780|chr11:61720762-61720762|G/A|missense_variant'] 93690 8931 RTLCLHFPL True PC9_epitope_Rep4 1098.6008205121 1098.59972993586 41.894 2 -0.9741218162426347 0.29323135548558843 1.0 ['chr18:73200789-73255813|194|28.28|0.36|6.31|-|0|LINC02864,LINC02864|1'] 96424 18941 SEIEILAVDLP True PC9_epitope_Rep1 1197.6492697428098 1197.64816993586 77.64 2 -0.9741233640627457 0.29323298110963975 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 66707 19129 LSTKFKYRYE True PC9_epitope_Rep5 1333.7030366511697 1333.70192993586 78.614 2 -0.9741277591285085 0.29323298110963975 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'RAG1|p.G933E|1|0.24|ENSG00000166349|chr11:36576102-36576102|G/A|missense_variant'] 59481 17124 LGPAPYDP True PC9_epitope_Rep3 828.40176926904 828.40066993586 71.022 2 -0.9741280770130732 0.29323298110963975 1.0 ['ENST00000491755.5_1_1:46087308-46087964:-|nuORF', 'ENST00000482416.5_1_1:46087308-46089051:-|nuORF', 'nc|ENSG00000159588|Q96LX7-2|CCDC17', 'nc|ENSG00000159588|Q96LX7-5|CCDC17', 'ENSG00000159588|ENST00000528266|CCDC17'] 11423 3734 DFNDFRKRHFW True NCI_RA007_Epitope_Rep2 1566.7480297809802 1566.7469299358602 19.166 2 -0.9741657388218945 0.2932560433472509 1.0 ['ENST00000512584.5_1_4:156828908-156831355:+|nuORF'] 56887 15759 LEDMLLFP True PC9_epitope_Rep3 976.49395540172 976.49284993586 65.773 2 -0.9741766172938965 0.2932655929088747 1.0 ['ENST00000602772.5_1_X:73289164-73289383:+|nuORF'] 134245 20266 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 84.895 2 -0.9741978735156429 0.29327117957032833 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 65250 13380 LSEGQFGIP True PC9_epitope_Rep2 946.4759968384599 946.47488993586 56.747 2 -0.9742015469620448 0.29327117957032833 1.0 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 66127 9585 LSPARDLLDVP True NCI_RA007_Epitope_Rep1 1194.66083748602 1194.6597499358602 41.282 2 -0.9742167542102087 0.2932767659298492 1.0 ['nc|ENSG00000127325|Q8N1M1-5|BEST3', 'nc|ENSG00000127325|Q8N1M1-6|BEST3', 'ENSG00000127325|ENST00000330891|BEST3'] 129128 8085 VTDAGLGS True H1975_Epitope_Rep3 718.34973369618 718.34918496793 36.073 1 -0.9742432112488834 0.2932767659298492 1.0 ['ENST00000506763.5_1_4:2243363-2243819:-|nuORF'] 115795 14340 TVLWPRQGP True PC9_epitope_Rep2 1052.5767139392399 1052.57560993586 60.422 2 -0.9742743800294339 0.29328235198746183 1.0 ['ENST00000324685.10_1_16:30787072-30787168:+|nuORF'] 47569 16233 IYMVLKCVYF True PC9_epitope_Rep5 1277.65522415373 1277.65357490379 67.429 3 -0.9742825254645459 0.29328235198746183 1.0 ['ENST00000262304.8_1_16:2139174-2139312:-|nuORF'] 4315 9442 AILMKLRS True H1975_Epitope_Rep1 930.5684577546599 930.56736993586 41.233 2 -0.9743293603784108 0.29329190029048163 1.0 ['ENST00000326965.6_1_6:159462524-159465214:-|nuORF'] 136974 25418 YKKKINPIK True PC9_epitope_Rep5 1130.7175645164998 1130.71646993586 103.0 2 -0.974372267508505 0.293295145972089 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 11265 10992 DEREPPGPP True H1975_Epitope_Rep2 992.4563240230398 992.45522993586 47.307 2 -0.9744196902714339 0.293295145972089 1.0 ['ENSG00000177614|ENST00000391860|PGBD5'] 136144 5966 YGGLRGAI True PC9_epitope_Rep6 805.4446371405298 805.44354993586 31.255 2 -0.9744782799053588 0.293295145972089 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1', 'SLC9A2|p.E646Kfs*9|1|0.24|ENSG00000115616|chr2:102704634-102704634|G/-|frameshift_variant', 'SLC9A2|p.T749Nfs*22|1|0.11|ENSG00000115616|chr2:102708286-102708287|-/C|frameshift_variant', 'ENSG00000115616|ENST00000233969|SLC9A2'] 131534 25693 VVVGVGLIVG True PC9_epitope_Rep1 910.5851533646199 910.58404993586 103.86 2 -0.9744795246915843 0.293295145972089 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 36124 7501 GVEQNHQRA True PC9_epitope_Rep1 1037.5002545236898 1037.49914993586 33.67 2 -0.9744801628338416 0.293295145972089 1.0 ['ENSG00000071537|ENST00000336735|SEL1L'] 136972 25663 YKKKINPIK True PC9_epitope_Rep1 1130.7175645164998 1130.71646993586 103.75 2 -0.9744938818442572 0.293295145972089 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 110286 18416 TIGLLVHFL True PC9_epitope_Rep5 1011.61170246563 1011.61060993586 75.857 2 -0.9745192915297652 0.2932967686155841 1.0 ['ENSG00000185873|ENST00000332644|TMPRSS11B', 'ENSG00000187054|ENST00000508048|TMPRSS11A', 'nc|ENSG00000187054|Q6ZMR5-1|TMPRSS11A'] 129086 25028 VTARVIGG True PC9_epitope_Rep5 771.4602872046698 771.4597349679301 101.41 1 -0.9745580007987472 0.2932967686155841 1.0 ['ENSG00000148843|ENST00000369797|PDCD11'] 15249 7162 EAGGHHRP True H1975_Epitope_Rep2 859.40489758687 859.40380993586 32.483 2 -0.9745621351641136 0.2932967686155841 1.0 ['nc|ENSG00000160285|P48449-2|LSS', 'nc|ENSG00000160285|P48449-3|LSS', 'ENSG00000160285|ENST00000397728|LSS'] 82923 16889 PWHGQGIV True H1975_Epitope_Rep2 892.4555361774 892.45442993586 70.208 2 -0.9745817246985387 0.2933158619944344 1.0 ['ENST00000467101.5_1_20:60776842-60777190:+|nuORF'] 82274 15947 PTMLRVYL True PC9_epitope_Rep5 991.55247333735 991.55136993586 66.329 2 -0.9745832432907076 0.2933158619944344 1.0 ['OR51A7|p.F85Y|1|0.28|ENSG00000176895|chr11:4907623-4907623|T/A|missense_variant'] 91181 10822 RLPTPEQI True PC9_epitope_Rep5 952.5341804209199 952.53308993586 46.616 2 -0.9746180747715113 0.2933794426357951 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 125649 9026 VMLENYENVAK True H1975_Epitope_Rep1 1308.6383877892802 1308.63728993586 39.625 2 -0.9746296401208469 0.29338502478758327 1.0 ['ENSG00000198028|ENST00000301480|ZNF560'] 102443 20776 SPWTRFQWRRR True NCI_RA007_Epitope_Rep1 1574.83309681762 1574.83198993586 85.047 2 -0.9746447956135439 0.29338502478758327 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 28696 19697 FSTRKNSMGI True PC9_epitope_Rep3 1139.57572796307 1139.57462993586 80.995 2 -0.9746987510305629 0.29339060663775984 1.0 ['WHSC1L1-DDHD2|1|fusion', 'ENSG00000085788|ENST00000397166|DDHD2', 'nc|ENSG00000085788|O94830-2|DDHD2'] 140045 3946 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 19.93 3 -0.9746999472409129 0.29339060663775984 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 4608 12969 ALAGRRVP True PC9_epitope_Rep1 838.5137197598599 838.51262993586 54.757 2 -0.9747255431935874 0.2933978064725269 1.0 ['ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF'] 61913 13833 LLLLLLLL True H1975_Epitope_Rep2 922.68307650074 922.68196993586 58.356 2 -0.9747567316061208 0.2933978064725269 1.0 ['ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'UCN3|p.P18H|1|0.47|ENSG00000178473|chr10:5373773-5373773|C/A|missense_variant', 'PLBD1|p.N149Ifs*17|1|0.25|ENSG00000121316|chr12:14540881-14540881|C/-|frameshift_variant', 'ENSG00000183971|ENST00000566435|NPW', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000182685|ENST00000328540|BRICD5', 'ENSG00000117899|ENST00000261758|MESD', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENSG00000184709|ENST00000371542|LRRC26', 'FAT1|p.H507Rfs*6|1|0.13|ENSG00000083857|chr4:186708307-186708308|AT/-|frameshift_variant', 'ENSG00000121316|ENST00000240617|PLBD1', 'FAT1|p.N618Tfs*9|1|0.18|ENSG00000083857|chr4:186707975-186707975|T/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENSG00000178473|ENST00000380433|UCN3', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENSG00000070031|ENST00000176195|SCT', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'nc|ENSG00000117899|Q14696-2|MESD', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-4|SHBG', 'nc|ENSG00000129214|P04278-3|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000129214|P04278-5|SHBG', 'ENSG00000129214|ENST00000380450|SHBG', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000125810|ENST00000246006|CD93', 'ENSG00000109758|ENST00000382774|HGFAC', 'SHBG|p.L175Afs*39|1|0.14|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'CD93|p.E121Rfs*79|1|0.71|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'ENSG00000167680|ENST00000586582|SEMA6B', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ADGRB1|p.D708Tfs*49|1|0.15|ENSG00000181790|chr8:142481700-142481700|G/-|frameshift_variant', 'ATRN-TNKS2|2|fusion', 'ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant', 'ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000162337|ENST00000294304|LRP5', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 76383 4357 NSKLHASSV True PC9_epitope_Rep4 941.49304388493 941.49194993586 23.202 2 -0.9747802914262245 0.2933978064725269 1.0 ['ENSG00000173572|ENST00000342929|NLRP13'] 55508 19604 LAVSIRNLL True PC9_epitope_Rep3 997.62841515893 997.62730993586 80.644 2 -0.9747994656057036 0.2933978064725269 1.0 ['ENST00000477312.1_1_3:196863310-196867015:-|nuORF'] 134246 20355 WRRRPRTRR True NCI_RA007_Epitope_Rep5 1338.7969860924197 1338.79588993586 85.233 2 -0.9748290633235378 0.2933978064725269 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 10838 9713 DAINKNQV True PC9_epitope_Rep2 900.46649478392 900.46538993586 42.698 2 -0.9748747069144437 0.29342085713899807 1.0 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-11|DMKN', 'nc|ENSG00000161249|Q6E0U4-13|DMKN', 'nc|ENSG00000161249|Q6E0U4-8|DMKN', 'ENST00000482321.5_1_19:35991290-36001371:-|nuORF', 'ENST00000486450.5_1_19:35991290-36001329:-|nuORF', 'nc|ENSG00000161249|Q6E0U4-10|DMKN', 'nc|ENSG00000161249|Q6E0U4-12|DMKN', 'nc|ENSG00000161249|Q6E0U4-14|DMKN', 'nc|ENSG00000161249|Q6E0U4-9|DMKN'] 137842 9166 YPHEAWSF True PC9_epitope_Rep2 1035.44503106335 1035.44392993586 40.595 2 -0.9748935126661628 0.29342643741811747 1.0 ['ENSG00000174945|ENST00000683327|AMZ1', 'nc|ENSG00000174945|Q400G9-2|AMZ1', 'ENST00000489665.1_1_7:2742357-2804491:+|nuORF'] 121169 8059 VGGKKDPSPP True H1975_Epitope_Rep1 980.5290950404799 980.52798993586 35.943 2 -0.9749237411010174 0.29342643741811747 1.0 ['ENST00000471720.1_1_3:160170509-160171103:+|nuORF'] 23382 7373 EVVDDEVLGP True NCI_RA007_Epitope_Rep2 1070.5131701928199 1070.5120699358602 33.304 2 -0.9749439546850084 0.2934320173957672 1.0 ['ENSG00000170092|ENST00000625065|SPDYE5', 'ENSG00000230358|ENST00000424157|SPDYE21', 'nc|ENSG00000205482|P0DV79|SPDYE18'] 136968 23729 YKKKINPIK True NCI_RA007_Epitope_Rep4 1130.7175645164998 1130.71646993586 102.89 2 -0.9749662390986022 0.2934320173957672 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 18811 6859 ELEARVPE True H1975_Epitope_Rep2 941.4818104948899 941.48070993586 31.301 2 -0.974972784102354 0.29344156019556467 1.0 ['nc|ENSG00000176438|Q6ZMZ3-2|SYNE3', 'ENSG00000176438|ENST00000682763|SYNE3', 'ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-3|SPTBN4', 'nc|ENSG00000160460|Q9H254-4|SPTBN4'] 86348 17954 QQKVEILTA True PC9_epitope_Rep2 1028.5866099165999 1028.58607496793 74.366 1 -0.9749827732802743 0.29345110273759845 1.0 ['ENSG00000162441|ENST00000377223|LZIC', 'nc|ENSG00000162441|Q8WZA0-2|LZIC'] 58769 16727 LFMKVFWFVFF True H1975_Epitope_Rep1 1509.7882869286098 1509.7871899358602 69.737 2 -0.9750214904090916 0.29347415050510506 1.0 ['ENST00000276569.7_1_8:66516226-66516463:-|nuORF'] 12861 13407 DLLFRFMNFLK True NCI_RA007_Epitope_Rep2 1442.77442776962 1442.7733299358601 56.792 2 -0.9750539705219151 0.2934836923492471 1.0 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14'] 26559 8148 FIVTQYPLP True NCI_RA007_Epitope_Rep4 1076.5906326678798 1076.5895299358601 38.131 2 -0.9751017065842336 0.2935067390541015 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 121443 20461 VGIISIPLK True PC9_epitope_Rep1 938.6164534929 938.61534993586 83.515 2 -0.9751845571677018 0.29359730981673804 1.0 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant', 'RYR3|p.V3486Lfs*23|1|0.16|ENSG00000198838|chr15:33813536-33813560|GTGGTGGCCTGTTTCAGGATGGCCC/-|frameshift_variant'] 82464 28061 PVDRIFDDKW True PC9_epitope_Rep1 1289.6404363946099 1289.63878490379 115.58 3 -0.9752019621258705 0.2936124240378123 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 111137 13705 TLEQVERERRK True H1975_Epitope_Rep3 1442.7953738962199 1442.79426993586 58.012 2 -0.9752092006308055 0.2936124240378123 1.0 ['nc|ENSG00000126001|Q9BV73-2|CEP250', 'ENSG00000126001|ENST00000397527|CEP250'] 32547 6782 GGTEPVVE True NCI_RA007_Epitope_Rep5 786.37594844402 786.37484993586 32.774 2 -0.9752193176578807 0.2936124240378123 1.0 ['ENST00000307790.7_3_22:30221719-30234222:-|nuORF'] 15519 8617 EARKYGLALDP True H1975_Epitope_Rep2 1231.6560864587498 1231.6549899358602 38.101 2 -0.9752713443622573 0.29362196324154977 1.0 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 20683 5539 EQIHYILKPD True H1975_Epitope_Rep3 1254.6608374860198 1254.6597499358602 26.354 2 -0.9753104466052473 0.29362753703428623 1.0 ['ENST00000464269.5_1_20:13773870-13789559:+|nuORF', 'nc|ENSG00000101247|Q5TEU4-2|NDUFAF5', 'ENSG00000101247|ENST00000378106|NDUFAF5'] 98095 10718 SHYSKNLTEKP True H1975_Epitope_Rep3 1302.6568147347398 1302.6557099358602 46.303 2 -0.9754032000414388 0.29362753703428623 1.0 ['ENSG00000138604|ENST00000261858|GLCE'] 60113 16056 LHVAAKEI True PC9_epitope_Rep3 879.51780208079 879.51670993586 66.911 2 -0.9754465358315448 0.2936505793069922 1.0 ['ENSG00000187961|ENST00000338591|KLHL17', 'ENST00000463212.1_1_1:896835-897009:+|nuORF'] 108871 17035 TERLRHLVGP True H1975_Epitope_Rep2 1176.6727395824 1176.6716499358602 70.781 2 -0.9755308892584269 0.2936752275243728 1.0 ['ENST00000419814.1_1_1:108963859-108964111:+|nuORF'] 31540 13223 GEFGGFSEV True NCI_RA007_Epitope_Rep3 927.3974121645899 927.39686496793 59.285 1 -0.9755674629917187 0.2936752275243728 1.0 ['nc|ENSG00000119844|Q6ULP2-7|AFTPH', 'ENST00000498706.5_1_2:64778608-64806757:+|nuORF', 'nc|ENSG00000119844|Q6ULP2-8|AFTPH', 'nc|ENSG00000119844|Q6ULP2-6|AFTPH', 'ENSG00000119844|ENST00000409933|AFTPH', 'nc|ENSG00000119844|Q6ULP2-9|AFTPH'] 3516 6147 AGLSHGHHQYA True NCI_RA007_Epitope_Rep4 1176.5424536888402 1176.5413499358601 30.255 2 -0.9755679360347522 0.2936752275243728 1.0 ['ENST00000523944.5_1_8:48889925-48890036:+|nuORF'] 123685 25488 VINYLLRLK True PC9_epitope_Rep1 1130.7175645165 1130.71697496793 103.03 1 -0.9755921714163043 0.2936752275243728 1.0 ['ENST00000333957.8_1_12:22602475-22602664:-|nuORF'] 11021 23553 DDHYRTGTRF True NCI_RA007_Epitope_Rep5 1266.57414773994 1266.57250490379 97.909 3 -0.9756107168737265 0.29367844026787643 1.0 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 123916 25067 VKKATILIS True NCI_RA007_Epitope_Rep5 971.6379172134699 971.63682993586 103.92 2 -0.975617977229153 0.29367844026787643 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2', 'PAPPA2|p.H356N|1|0.2|ENSG00000116183|chr1:176594670-176594670|C/A|missense_variant'] 98175 9364 SIDLLEDVFS True H1975_Epitope_Rep1 1136.56012038524 1136.55902993586 40.926 2 -0.9756373974708686 0.29367844026787643 1.0 ['ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A'] 121149 21649 VGGGQGQP True PC9_epitope_Rep4 698.33475233838 698.3342049679301 91.464 1 -0.9756416265944534 0.29367844026787643 1.0 ['nc|ENSG00000132677|Q9H310-3|RHBG'] 81456 7750 PQKYYWWFFQT True H1975_Epitope_Rep1 1592.7452358163196 1592.7441299358602 34.77 2 -0.9756531721630765 0.29367844026787643 1.0 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1'] 55205 16631 LAPPEWDWRS True PC9_epitope_Rep5 1255.5985715826298 1255.59691490379 68.977 3 -0.9756546827000734 0.29367844026787643 1.0 ['ENSG00000174080|ENST00000310325|CTSF', 'ENST00000529199.1_1_11:66333209-66333615:-|nuORF', 'ENST00000527141.5_1_11:66331945-66334941:-|nuORF'] 120539 12712 VGAAGRNA True NCI_RA007_Epitope_Rep4 714.3772858566999 714.37673496793 55.951 1 -0.9756831108155485 0.2936879767771552 1.0 ['PYROXD2|p.M563V|1|0.36|ENSG00000119943|chr10:98383857-98383857|T/C|missense_variant'] 134259 19922 WRRRRPGRR True NCI_RA007_Epitope_Rep5 1294.7707713445798 1294.76966993586 83.545 2 -0.9756894681344135 0.29371101450058057 1.0 ['ENSG00000110665|ENST00000381153|C11orf21'] 30312 21374 GADEARSWDFL True PC9_epitope_Rep1 1265.56766537717 1265.5665699358601 87.047 2 -0.9756985876986768 0.2937165847599503 1.0 ['ENST00000478522.1_1_20:16710709-16713038:+|nuORF'] 46018 9685 ISVFYTMLPP True NCI_RA007_Epitope_Rep4 1166.60456847986 1166.6034699358602 44.103 2 -0.9757222783104121 0.2937165847599503 1.0 ['ENSG00000196772|ENST00000641093|OR14A16'] 67651 14450 LTFFHFFFFFK True H1975_Epitope_Rep3 1526.7750793926195 1526.77398993586 60.939 2 -0.975770467746459 0.29373565546105035 1.0 ['ENST00000226230.7_1_17:26653793-26654375:+|nuORF'] 2903 4403 AFAMPLPPHP True NCI_RA007_Epitope_Rep5 1076.54772231008 1076.5466299358602 23.566 2 -0.975782647842941 0.29373565546105035 1.0 ['ENSG00000125363|ENST00000380714|AMELX', 'nc|ENSG00000125363|Q99217-3|AMELX', 'ENSG00000099721|ENST00000651267|AMELY', 'nc|ENSG00000099721|Q99218|AMELY'] 125487 14211 VLVIHHVP True PC9_epitope_Rep3 912.55452194268 912.55342993586 59.749 2 -0.9758135154098604 0.2937507593860111 1.0 ['nc|ENSG00000163218|Q96LB8-2|PGLYRP4', 'ENSG00000163218|ENST00000359650|PGLYRP4'] 25595 5037 FESYPELQD True H1975_Epitope_Rep2 1126.4818700645399 1126.48021490379 24.457 3 -0.9758256611041856 0.2937507593860111 1.0 ['ENST00000593818.5_3_19:50167869-50168989:-|nuORF'] 3110 6259 AGARKKELL True PC9_epitope_Rep1 984.6080140675198 984.60690993586 28.889 2 -0.9758330455351755 0.2937507593860111 1.0 ['ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 52578 12492 KPVTVMFDL True NCI_RA007_Epitope_Rep5 1048.56270366788 1048.5616099358601 54.707 2 -0.9761667745055566 0.29387385927965876 1.0 ['nc|ENSG00000130150|Q8NHP6-2|MOSPD2', 'ENSG00000130150|ENST00000380492|MOSPD2'] 68936 24968 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 104.58 3 -0.9761725815074751 0.29387385927965876 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 58375 17821 LEVLEAGI True PC9_epitope_Rep2 842.4749342092999 842.47382993586 73.842 2 -0.9761974560430825 0.29387385927965876 1.0 ['ENSG00000166938|ENST00000319212|DIS3L', 'DIS3L|p.K695Rfs*37|1|0.32|ENSG00000166938|chr15:66326243-66326243|A/-|frameshift_variant', 'nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L', 'DIS3L|p.N286Tfs*9|1|0.18|ENSG00000166938|chr15:66315076-66315076|A/-|frameshift_variant', 'ENST00000565281.5_1_15:66585934-66615040:+|nuORF', 'ENST00000524795.5_1_15:66587446-66615029:+|nuORF'] 56858 9780 LEDIRQRYEQQ True NCI_RA007_Epitope_Rep1 1476.7321049333202 1476.7310099358601 42.045 2 -0.9762333978490633 0.2938794243905073 1.0 ['ENSG00000154240|ENST00000535342|CEP112'] 70136 19044 LYKNRVEF True PC9_epitope_Rep3 1067.5763795860698 1067.5752899358602 78.473 2 -0.9762408670126571 0.2938794243905073 1.0 ['ENSG00000159131|ENST00000381815|GART', 'ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 93041 23409 RRRHRAAH True PC9_epitope_Rep4 1058.6070600644198 1058.60596993586 98.323 2 -0.9762641430176587 0.2938849892008639 1.0 ['ENST00000405515.5_2_11:67957596-67981223:-|nuORF'] 115243 17092 TVDDRVSLL True PC9_epitope_Rep1 1016.5502244078799 1016.54912993586 70.571 2 -0.9762713082096385 0.2938849892008639 1.0 ['ENST00000472024.2_1_3:87276594-87289522:+|nuORF'] 79126 7392 PGAGSGVP True NCI_RA007_Epitope_Rep2 640.31803964508 640.3174949679301 33.379 1 -0.9763296690182328 0.29388658666630674 1.0 ['ENSG00000143162|ENST00000370509|CREG1'] 115180 13617 TVAPKHHVP True PC9_epitope_Rep2 984.5504991914 984.54940993586 57.67 2 -0.9763349887396777 0.29388658666630674 1.0 ['ENSG00000165591|ENST00000374900|FAAH2'] 73076 11045 NDNDDDNDDD True NCI_RA007_Epitope_Rep2 1165.32794817393 1165.32684993586 47.56 2 -0.9763409914996655 0.29388658666630674 1.0 ['ENST00000366930.8_1_1:218614709-218614793:+|nuORF'] 36339 13749 GVHAVMYSYY True NCI_RA007_Epitope_Rep4 1188.52738078832 1188.5262899358602 60.112 2 -0.9763887625488616 0.2938961179201987 1.0 ['ENSG00000170522|ENST00000302274|ELOVL6'] 30572 10497 GAKGRGGG True NCI_RA007_Epitope_Rep5 658.3510711088599 658.35052496793 47.008 1 -0.9764410193423956 0.29391914692582843 1.0 ['ENST00000595897.5_1_19:42401825-42402293:+|nuORF'] 100025 12509 SLKEEERLIES True PC9_epitope_Rep1 1331.69325981311 1331.6921699358602 52.984 2 -0.9765986749661286 0.29396917096347486 1.0 ['ENSG00000109079|ENST00000226225|TNFAIP1', 'nc|ENSG00000109079|Q13829-2|TNFAIP1'] 21953 5926 ESLERQLKHPK True NCI_RA007_Epitope_Rep1 1363.7571974823497 1363.75555490379 27.098 3 -0.9767676928005788 0.29401919365070794 1.0 ['ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-4|UBA6', 'ENST00000429659.7_1_4:68529542-68566852:-|nuORF', 'nc|ENSG00000033178|A0AVT1-3|UBA6'] 25659 18217 FEYYSSSV True PC9_epitope_Rep5 980.4127278755599 980.41162993586 75.084 2 -0.9767683214450567 0.29402475401206657 1.0 ['nc|ENSG00000266200|P54317|PNLIPRP2'] 12250 12361 DIRHPVVNFP True PC9_epitope_Rep3 1192.63529144452 1192.6336349037902 52.574 3 -0.9767923832692701 0.29402475401206657 1.0 ['nc|ENSG00000204590|P36915-2|GNL1', 'ENSG00000204590|ENST00000376621|GNL1'] 24238 5884 EYWAHTRWHHF True H1975_Epitope_Rep1 1568.7061649689997 1568.70451490379 27.703 3 -0.9768143259387709 0.2940342826292347 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2'] 101524 4670 SPAKNKTTA True PC9_epitope_Rep3 916.4977949122 916.49668993586 23.058 2 -0.9768817050933017 0.29410732602710143 1.0 ['ENST00000330843.8_1_8:37730107-37730260:-|nuORF'] 114591 6976 TSLGNIVR True PC9_epitope_Rep1 858.49231560894 858.49120993586 31.639 2 -0.9768877349900568 0.29410732602710143 1.0 ['ENST00000607315.1_1_8:30013391-30013664:-|nuORF', 'chr2:61972026-62000701|142|25.2|0.65|5.27|+|0|TE_info:AluJb,AluJb_dup14613,Alu,SINE,donor,+,61971839,61972026|None,COMMD1|2', 'nc|ENSG00000162493|Q86YL7-2|PDPN'] 67654 18639 LTFFSQQI True PC9_epitope_Rep6 982.5123823471799 982.51128993586 84.338 2 -0.9769815250992964 0.2941398763732556 1.0 ['nc|ENSG00000152952|O00469-3|PLOD2', 'ENST00000478436.1_1_3:145795570-145803239:-|nuORF'] 26461 17404 FIPFHPVT True PC9_epitope_Rep6 956.51198842436 956.51088993586 79.559 2 -0.9770036591816352 0.2941398763732556 1.0 ['ENSG00000134516|ENST00000520908|DOCK2'] 22090 9047 ESTWEKPQELK True NCI_RA007_Epitope_Rep2 1373.6826951294095 1373.68158993586 39.792 2 -0.9770447191568005 0.2941763951683649 1.0 ['ENST00000507175.5_1_5:145826912-145859658:+|nuORF', 'nc|ENSG00000113649|O14776-2|TCERG1', 'nc|ENSG00000113649|O14776|TCERG1', 'ENSG00000113649|ENST00000679501|TCERG1', 'ENST00000513298.5_1_5:145838810-145849312:+|nuORF'] 18538 6458 EKSEFQRE True NCI_RA007_Epitope_Rep1 1051.4934378077498 1051.4923499358601 29.142 2 -0.9771032234175089 0.2942129129777586 1.0 ['MYH15|p.H1065Pfs*7|1|0.16|ENSG00000144821|chr3:108437641-108437641|T/-|frameshift_variant', 'ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF'] 121828 14624 VGNIWVCY True H1975_Epitope_Rep2 952.4476739156398 952.44656993586 61.411 2 -0.977183708639087 0.2942359339784337 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2', 'nc|ENSG00000117479|O60779-2|SLC19A2'] 56448 11293 LDSPQRALY True PC9_epitope_Rep1 1061.5505587610498 1061.54946993586 48.318 2 -0.9772015206980587 0.29424545871683444 1.0 ['ENST00000476678.1_1_22:20754858-20755110:+|nuORF', 'nc|ENSG00000185252|Q16587-3|ZNF74', 'ENSG00000185252|ENST00000400451|ZNF74', 'ENST00000403682.7_1_22:20748811-20761255:+|nuORF'] 4869 12578 ALGAESPA True NCI_RA007_Epitope_Rep1 714.35481907662 714.3542749679301 52.906 1 -0.97728585083292 0.29426847865693195 1.0 ['ENST00000459979.2_1_2:177001364-177001583:+|nuORF'] 54519 9926 LAAFSTAIA True H1975_Epitope_Rep1 863.4752685624699 863.47416993586 43.117 2 -0.9774834219776177 0.29432801176772244 1.0 ['ENST00000481305.1_1_7:150500415-150501953:+|nuORF', 'ENST00000475007.5_1_7:150500316-150501569:+|nuORF', 'ENSG00000002933|ENST00000004103|TMEM176A'] 22624 7948 ETQLLLEVP True NCI_RA007_Epitope_Rep2 1040.57537652656 1040.57426993586 35.547 2 -0.9775403050976097 0.29432801176772244 1.0 ['ENSG00000186891|ENST00000379268|TNFRSF18'] 117955 11704 VARRAAVS True NCI_RA007_Epitope_Rep5 828.4929843152798 828.49188993586 51.672 2 -0.977558711227675 0.29433911342014707 1.0 ['ENST00000466410.5_1_2:128398362-128421974:-|nuORF', 'ENST00000484252.5_1_2:128398362-128399806:-|nuORF'] 86047 16127 QPLLQTTP True PC9_epitope_Rep3 896.49673228304 896.49618496793 67.181 1 -0.9776083932551747 0.29433911342014707 1.0 ['ENSG00000184271|ENST00000333640|POU6F1'] 117507 4667 VAETTRESP True H1975_Epitope_Rep2 988.48253877088 988.48144993586 23.048 2 -0.9776311755150399 0.29433911342014707 1.0 ['ENST00000558114.1_1_14:24768105-24768312:-|nuORF'] 61380 15864 LLEKVPRL True PC9_epitope_Rep4 966.6226015024998 966.62150993586 68.951 2 -0.9776479626029931 0.29433911342014707 1.0 ['LRRIQ4|p.R268L|1|0.45|ENSG00000188306|chr3:169822724-169822724|G/T|missense_variant'] 20604 8663 EQERAYIGY True H1975_Epitope_Rep2 1127.5247379360299 1127.52364993586 38.281 2 -0.9776885345013603 0.29435418578291145 1.0 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion'] 52858 9858 KRCQGRMRK True PC9_epitope_Rep1 1161.6335347060497 1161.63187490379 42.778 3 -0.9777006743318855 0.29435418578291145 1.0 ['nc|ENSG00000167632|Q96Q05-3|TRAPPC9', 'ENSG00000167632|ENST00000438773|TRAPPC9', 'EIF2C2-TRAPPC9|3|fusion', 'nc|ENSG00000167632|Q96Q05-2|TRAPPC9', 'TRAPPC9|p.Y197H|2|0.18|ENSG00000167632|chr8:140439193-140439193|A/G|missense_variant', 'TRAPPC9|p.Q801Rfs*15|1|0.16|ENSG00000167632|chr8:140252807-140252807|G/-|frameshift_variant'] 40031 9633 HQVKNHMWIFV True PC9_epitope_Rep4 1437.7339599399702 1437.7323149037902 44.677 3 -0.9777296444577672 0.29435418578291145 1.0 ['ENSG00000131747|ENST00000423485|TOP2A', 'nc|ENSG00000131747|P11388-2|TOP2A', 'nc|ENSG00000131747|P11388-3|TOP2A'] 23304 12441 EVSNRFSGVP True PC9_epitope_Rep3 1090.5407223533398 1090.5396299358601 52.879 2 -0.9777644898452603 0.29439069478740776 1.0 ['nc|ENSG00000243264|A0A075B6S2|IGKV2D-29', 'nc|ENSG00000211623|A0A0A0MRZ7|IGKV2D-26'] 118601 7306 VEAIRKNP True NCI_RA007_Epitope_Rep1 925.53451477409 925.53340993586 32.41 2 -0.9777748135462425 0.2944002158952908 1.0 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1', 'ENST00000498520.1_1_2:206992517-206997685:-|nuORF'] 125064 25735 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 106.52 3 -0.9778363047493023 0.29441925734024177 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 75152 2111 NNEFRIQVRD True H1975_Epitope_Rep3 1289.6476470333698 1289.64601490379 11.311 3 -0.9778441386684649 0.29441925734024177 1.0 ['DSG1|p.S23N|1|0.2|ENSG00000134760|chr18:31326600-31326600|G/A|missense_variant'] 72429 9008 MTGEKRSLDL True NCI_RA007_Epitope_Rep5 1148.5859582935998 1148.58430490379 41.308 3 -0.9779027505931595 0.2944422705868066 1.0 ['nc|ENSG00000122877|P11161-2|EGR2', 'ENSG00000122877|ENST00000242480|EGR2'] 83990 7979 QELWIYQREWQ True NCI_RA007_Epitope_Rep1 1577.76267678561 1577.76156993586 35.029 2 -0.9779849888363421 0.29445179048492864 1.0 ['nc|ENSG00000113812|Q9H981-3|ACTR8', 'nc|ENSG00000113812|Q9H981-2|ACTR8', 'ENSG00000113812|ENST00000335754|ACTR8'] 42702 13055 IEWRWQRSLW True NCI_RA007_Epitope_Rep1 1458.7520525322598 1458.75094993586 54.772 2 -0.9780255874297972 0.294474802671524 1.0 ['ENST00000478564.5_1_1:151318991-151319697:-|nuORF'] 111780 5466 TLQSEHDTL True PC9_epitope_Rep4 1042.49310345458 1042.49200993586 27.772 2 -0.9780906407765622 0.29449384081924523 1.0 ['ENSG00000135968|ENST00000309863|GCC2', 'ENST00000393321.2_3_2:109102933-109106471:+|nuORF'] 137802 23420 YPELQVLLF True PC9_epitope_Rep3 1120.6168474157198 1120.61574993586 95.363 2 -0.9780961599789705 0.29449384081924523 1.0 ['OR5D18|p.P27L|1|0.35|ENSG00000186119|chr11:55819709-55819709|C/T|missense_variant'] 121855 13831 VGPAAVIVLVN True PC9_epitope_Rep4 1050.6437308698999 1050.6426299358602 61.099 2 -0.9781449171891343 0.2945438355055452 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000465256.5_1_1:32201179-32202160:-|nuORF'] 74866 9869 NLQNQASLSF True PC9_epitope_Rep4 1120.5512870370399 1120.55018993586 45.612 2 -0.9781567142959261 0.2945533533911683 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 93214 18818 RRRRRRGP True H1975_Epitope_Rep2 1108.6914583947198 1108.6903699358602 78.138 2 -0.9781636006642102 0.2945588969387893 1.0 ['ENSG00000248767|ENST00000506382|FOXL3'] 2357 8027 AEQFAIAE True NCI_RA007_Epitope_Rep2 877.4181476091699 877.4175949679301 35.855 1 -0.9781715598179994 0.2945588969387893 1.0 ['ENST00000487702.1_1_3:184059912-184060866:+|nuORF', 'nc|ENSG00000175182|Q6UXB0-2|FAM131A', 'nc|ENSG00000175182|Q6UXB0-1|FAM131A', 'ENSG00000175182|ENST00000383847|FAM131A'] 18036 13569 EIILPIDQK True PC9_epitope_Rep5 1067.6226610721499 1067.6215699358602 57.217 2 -0.9781924681326916 0.2945604662457504 1.0 ['ENST00000260323.15_1_15:54919629-54919713:+|nuORF'] 85131 10234 QITPNQKTL True PC9_epitope_Rep6 1041.5818588893299 1041.5807699358602 50.022 2 -0.9781969282640203 0.2945604662457504 1.0 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 55187 19757 LAPGEIDPL True PC9_epitope_Rep4 923.4963979298699 923.49530993586 84.119 2 -0.9782090941843703 0.2945604662457504 1.0 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 78690 2364 PEDRKLKKNKK True NCI_RA007_Epitope_Rep2 1382.8357821562197 1382.83414490379 12.919 3 -0.9783177385448287 0.2945794997706608 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 36929 15026 GVRCAGGH True NCI_RA007_Epitope_Rep4 755.3496912098699 755.3491449679301 65.312 1 -0.9783235985758254 0.2945794997706608 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B'] 26849 8903 FLERKRRNDLR True NCI_RA007_Epitope_Rep2 1501.8589772122898 1501.8578899358602 39.257 2 -0.978370055227968 0.2946120224476581 1.0 ['ENSG00000116990|ENST00000372816|MYCL', 'nc|ENSG00000116990|P12524-3|MYCL'] 100971 4506 SLSSSSPSLCR True NCI_RA007_Epitope_Rep2 1122.5339227207398 1122.53282993586 22.158 2 -0.9784217617065645 0.2946120224476581 1.0 ['ENST00000263980.7_1_1:27429796-27432431:-|nuORF'] 125259 10799 VLRIKFTEE True NCI_RA007_Epitope_Rep4 1133.6444591458899 1133.64280490379 48.385 3 -0.9784750158988553 0.2946620081209783 1.0 ['ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA'] 55425 8180 LATKMEYFYWR True NCI_RA007_Epitope_Rep2 1506.7329568804598 1506.73184993586 36.454 2 -0.9784825366505334 0.2946715230001349 1.0 ['ENST00000496711.5_1_9:130118742-130126953:+|nuORF'] 92164 23280 RQEKKIVLKPK True NCI_RA007_Epitope_Rep3 1365.8820040726498 1365.88090993586 101.12 2 -0.9785490865538402 0.29472150652223766 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 22879 8130 EVETREKEP True H1975_Epitope_Rep1 1115.54586730343 1115.5447699358601 36.21 2 -0.9785739828322957 0.29472306903714895 1.0 ['nc|ENSG00000104221|Q9HAW0-2|BRF2', 'ENSG00000104221|ENST00000220659|BRF2'] 31149 7117 GDEAISEYK True H1975_Epitope_Rep3 1010.4556553167 1010.45454993586 32.346 2 -0.978612170474332 0.29472306903714895 1.0 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 67650 14461 LTFFHFFFFFK True H1975_Epitope_Rep1 1526.7750793926195 1526.77398993586 60.821 2 -0.9786508384359082 0.29472306903714895 1.0 ['ENST00000226230.7_1_17:26653793-26654375:+|nuORF'] 91384 18986 RMVKKMKK True NCI_RA007_Epitope_Rep2 1047.64091150227 1047.63980993586 78.703 2 -0.9787646455863677 0.29475956026168476 1.0 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 82904 8799 PVYTQFYFFNV True PC9_epitope_Rep6 1423.6812385774297 1423.68014993586 43.745 2 -0.9789412504926838 0.29488251638835683 1.0 ['nc|ENSG00000138760|Q14108-2|SCARB2', 'ENSG00000138760|ENST00000264896|SCARB2'] 15220 12570 EAFSGEPFNLH True PC9_epitope_Rep2 1246.56185172074 1246.56074993586 53.659 2 -0.9789458285044645 0.29488251638835683 1.0 ['nc|ENSG00000110881|P78348-3|ASIC1'] 65009 14640 LSDIFRVVP True PC9_epitope_Rep2 1044.59678067748 1044.59568993586 61.581 2 -0.9789487390644049 0.29488251638835683 1.0 ['nc|ENSG00000151892|P56159-2|GFRA1', 'ENSG00000151892|ENST00000355422|GFRA1'] 137691 19881 YMIKYWIEVK True H1975_Epitope_Rep1 1371.7260805948702 1371.72498993586 82.746 2 -0.9790500303410941 0.29490153763150795 1.0 ['ENST00000470305.1_1_9:91939336-91939396:+|nuORF'] 5784 7571 APEYYEPSL True PC9_epitope_Rep4 1067.4811417885498 1067.48004993586 36.5 2 -0.979052209889218 0.29490153763150795 1.0 ['ENST00000467457.5_1_3:49053892-49055376:-|nuORF'] 74472 19323 NKIYVFFQHAF True PC9_epitope_Rep2 1412.72410644892 1412.72245490379 79.7 3 -0.9791206835035731 0.29495151130953184 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 100083 7882 SLKRSTIEL True NCI_RA007_Epitope_Rep5 1045.61315901761 1045.61206993586 37.013 2 -0.9791364808814513 0.2949610207439778 1.0 ['ENST00000508743.1_1_17:46969858-46986323:-|nuORF'] 85611 18682 QLNHILGIL True PC9_epitope_Rep6 1019.6127650947899 1019.61166993586 84.504 2 -0.9791434938759468 0.29496257333603076 1.0 ['nc|ENSG00000102882|P27361-3|MAPK3', 'ENSG00000100030|ENST00000215832|MAPK1', 'ENSG00000102882|ENST00000263025|MAPK3'] 44657 19972 IPLIERLQRN True NCI_RA007_Epitope_Rep1 1250.7459045226599 1250.74426490379 81.893 3 -0.979156003898727 0.29496257333603076 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 71682 8259 MLWLYLAP True PC9_epitope_Rep1 1005.5357606440499 1005.53466993586 36.602 2 -0.9791621962651508 0.29496257333603076 1.0 ['ENST00000483825.5_1_1:167400597-167400867:-|nuORF'] 117335 5959 VAALLCRSP True PC9_epitope_Rep2 928.5164221818001 928.51532993586 28.31 2 -0.9791704174800877 0.29498556901248885 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'TANC2|p.M758Sfs*26|1|0.14|ENSG00000170921|chr17:63355299-63355303|GACAT/-|frameshift_variant'] 123369 10216 VIANDRAYKLK True NCI_RA007_Epitope_Rep2 1289.7455701694896 1289.74446993586 44.327 2 -0.9791822817758383 0.2949950773463525 1.0 ['ENSG00000047648|ENST00000337414|ARHGAP6', 'ARHGAP6|p.R433Efs*9|1|0.38|ENSG00000047648|chrX:11182095-11182095|G/-|frameshift_variant', 'nc|ENSG00000047648|O43182-3|ARHGAP6', 'nc|ENSG00000047648|O43182-2|ARHGAP6', 'nc|ENSG00000047648|O43182-4|ARHGAP6', 'nc|ENSG00000047648|O43182-5|ARHGAP6', 'ENST00000489330.6_1_X:11166772-11683098:-|nuORF'] 60883 14772 LKQRWELERLE True PC9_epitope_Rep5 1498.8256113953396 1498.82395490379 61.82 3 -0.9792086478439022 0.2950045854237471 1.0 ['ENSG00000139437|ENST00000405876|TCHP'] 124725 3626 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 20.016 3 -0.9792634012708613 0.29501409324468303 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 120471 17564 VFVLPFPV True NCI_RA007_Epitope_Rep3 916.5422259234799 916.54112993586 77.051 2 -0.9793195844542953 0.2950370869858395 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 124522 7251 VLFYLQNHRY True PC9_epitope_Rep3 1351.70370535751 1351.70206490379 32.901 3 -0.979395937550253 0.2950426151688424 1.0 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 24853 18347 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 76.46 2 -0.9794302220269826 0.2950426151688424 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 99479 18897 SLEPDIMV True NCI_RA007_Epitope_Rep3 902.44191982886 902.4413749679301 82.621 1 -0.9794672153066506 0.2950656075951074 1.0 ['nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A', 'ENSG00000198826|ENST00000361627|ARHGAP11A'] 40937 19480 HVYHIYCLVAM True PC9_epitope_Rep3 1347.6467847283502 1347.6456899358602 80.159 2 -0.9795199597763785 0.2950861673723671 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 89091 9721 REEWERQYSRQ True NCI_RA007_Epitope_Rep3 1565.7335019156499 1565.73240993586 45.308 2 -0.9795341342988899 0.2950861673723671 1.0 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'ENST00000587472.5_1_19:45572450-45574100:+|nuORF', 'ENST00000592876.1_1_19:45573154-45573820:+|nuORF', 'ENST00000588070.1_1_19:45573154-45574100:+|nuORF', 'ENST00000391952.7_1_19:45571280-45574100:+|nuORF', 'ENST00000585615.5_1_19:45571485-45574100:+|nuORF'] 14450 14786 DTPAGVLSY True PC9_epitope_Rep2 921.44436235701 921.44381496793 62.137 1 -0.9795513901951239 0.2950861673723671 1.0 ['nc|ENSG00000004948|P30988-3|CALCR', 'nc|ENSG00000004948|P30988-4|CALCR', 'ENSG00000004948|ENST00000426151|CALCR', 'nc|ENSG00000004948|P30988-1|CALCR', 'nc|ENSG00000004948|P30988-5|CALCR', 'nc|ENSG00000004948|P30988-6|CALCR'] 55919 10097 LDGSKRRRLT True NCI_RA007_Epitope_Rep5 1200.7051023398399 1200.70400993586 45.473 2 -0.9795518716151356 0.2950861673723671 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF', 'ENST00000541061.1_1_4:110897303-110898417:+|nuORF'] 20190 19491 ENSIQLRELE True PC9_epitope_Rep4 1229.62518025329 1229.6240899358602 83.088 2 -0.9795854230069644 0.2950861673723671 1.0 ['MNS1|p.E120Q|1|0.21|ENSG00000138587|chr15:56446939-56446939|C/G|missense_variant'] 115023 9312 TTLYHDRDP True H1975_Epitope_Rep2 1116.5199869087598 1116.5188899358602 40.779 2 -0.979671520925395 0.29511866235167206 1.0 ['ERC1|p.C1034Y|1|0.36|ENSG00000082805|chr12:1444638-1444638|G/A|missense_variant'] 83802 8469 QEEMIFQIPWK True NCI_RA007_Epitope_Rep2 1447.7169724631497 1447.7158699358602 37.586 2 -0.9796790253777019 0.29511866235167206 1.0 ['ENST00000459982.5_1_5:131821868-131826375:-|nuORF', 'ENST00000472045.1_1_5:131822508-131823888:-|nuORF'] 66950 16523 LSYRFKQGFRR True NCI_RA007_Epitope_Rep1 1456.8051507342796 1456.8040499358601 68.386 2 -0.9797800379623958 0.29512816709591294 1.0 ['ENSG00000278195|ENST00000610913|SSTR3'] 109086 18905 TFFDGLLVT True NCI_RA007_Epitope_Rep4 1011.5276980581499 1011.52717496793 81.745 1 -0.9799139104546446 0.29520509155632263 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 63533 23235 LPKWRCRRA True PC9_epitope_Rep1 1184.6713001137598 1184.67077496793 94.164 1 -0.9799501112696186 0.29522807869153084 1.0 ['ENST00000483635.5_1_1:219347256-219347463:+|nuORF'] 55170 15616 LAPARHSTL True PC9_epitope_Rep2 964.54541381096 964.54430993586 65.344 2 -0.9800611372495869 0.29527803246858314 1.0 ['ENST00000371437.4_1_X:119005607-119005844:+|nuORF'] 950 13208 ADYAQFQGRRR True H1975_Epitope_Rep1 1366.6854295244198 1366.6843299358602 55.902 2 -0.9801077070523437 0.2952875345513382 1.0 ['CCDC113|p.R78Q|2|0.08|ENSG00000103021|chr16:58254002-58254002|G/A|missense_variant'] 12400 18880 DKELEVLSLH True H1975_Epitope_Rep1 1181.6292030045702 1181.62810993586 78.726 2 -0.9802453321619234 0.2953105196451204 1.0 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|5|fusion', 'FGFR3-TACC3|2|fusion', 'FGFR3-TACC3|14|fusion', 'ENSG00000068078|ENST00000440486|FGFR3', 'nc|ENSG00000068078|P22607-4|FGFR3'] 71763 9631 MNECRNWQDN True PC9_epitope_Rep5 1308.4975542953598 1308.49644993586 42.01 2 -0.9803256900777472 0.2953485236618579 1.0 ['ENSG00000106546|ENST00000242057|AHR'] 117348 19529 VAAQRLVLDTL True PC9_epitope_Rep1 1197.7081220316097 1197.7070299358602 79.94 2 -0.9803452586299064 0.2953485236618579 1.0 ['ENST00000503044.5_1_5:176798183-176798888:+|nuORF', 'ENST00000514102.5_1_5:176797843-176799073:+|nuORF', 'nc|ENSG00000169220|O43566-6|RGS14', 'ENST00000425155.6_1_5:176795054-176799073:+|nuORF', 'nc|ENSG00000169220|O43566-5|RGS14', 'ENSG00000169220|ENST00000408923|RGS14'] 4972 7858 ALINSLKVL True NCI_RA007_Epitope_Rep3 969.62226714933 969.6211699358599 38.029 2 -0.9803482633247115 0.2953485236618579 1.0 ['ENST00000565062.5_1_16:90097706-90103159:+|nuORF'] 128719 19982 VSPKEVATL True PC9_epitope_Rep5 942.5385970950199 942.53750993586 81.914 2 -0.9803550536260107 0.2953485236618579 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'ENST00000486327.6_1_19:47880370-47884327:+|nuORF'] 109181 17019 TFRPLVDSV True PC9_epitope_Rep4 1032.56039516876 1032.55928993586 73.457 2 -0.980401878243309 0.29535955995362256 1.0 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 78581 2686 PDRKAAVSHW True PC9_epitope_Rep3 1165.59924028897 1165.5976049037902 14.799 3 -0.9804102847700117 0.29535955995362256 1.0 ['ENSG00000168036|ENST00000349496|CTNNB1'] 116181 9423 TVTLANLQDFK True NCI_RA007_Epitope_Rep1 1248.6714021697196 1248.66976490379 40.647 3 -0.9804143434098608 0.29535955995362256 1.0 ['ENSG00000144857|ENST00000682979|BOC', 'nc|ENSG00000144857|Q9BWV1|BOC', 'ENST00000471963.6_1_3:112968649-112990141:+|nuORF', 'BOC-SIDT1|1|fusion'] 59075 15839 LGDQPSIGLA True PC9_epitope_Rep5 969.5131106231698 969.51200993586 65.915 2 -0.9804147239641231 0.29535955995362256 1.0 ['nc|ENSG00000135297|Q9Y2Z2-5|MTO1', 'ENSG00000135297|ENST00000498286|MTO1', 'nc|ENSG00000135297|Q9Y2Z2|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-6|MTO1', 'nc|ENSG00000135297|Q9Y2Z2-3|MTO1', 'ENST00000370308.8_1_6:74171496-74189568:+|nuORF'] 111491 25117 TLLLLLLL True PC9_epitope_Rep1 910.64669099202 910.64558993586 101.5 2 -0.9804555225695478 0.2953690596562184 1.0 ['CON__ENSEMBL:ENSBTAP00000024146', 'ENSG00000161911|ENST00000426005|TREML1', 'nc|ENSG00000161911|Q86YW5-2|TREML1', 'nc|ENSG00000161911|Q86YW5-3|TREML1', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT', 'CON__P50448', 'nc|ENSG00000173662|Q7RTX1-2|TAS1R1', 'TAS1R1|p.C745Lfs*6|1|0.08|ENSG00000173662|chr1:6579288-6579289|-/C|frameshift_variant', 'ENSG00000173662|ENST00000333172|TAS1R1'] 37100 24221 GVSPLRRWIQR True PC9_epitope_Rep3 1366.79458605058 1366.7934899358602 98.463 2 -0.9804890192465305 0.2954030736047452 1.0 ['ENSG00000198854|ENST00000368775|C1orf68'] 55602 21685 LCRHCPKDWTF True PC9_epitope_Rep1 1404.6430963302398 1404.64198993586 88.239 2 -0.980525484105858 0.2954030736047452 1.0 ['nc|ENSG00000104938|Q9H2X3-4|CLEC4M', 'nc|ENSG00000104938|Q9H2X3-7|CLEC4M', 'nc|ENSG00000104938|Q9H2X3-9|CLEC4M', 'nc|ENSG00000104938|Q9H2X3-3|CLEC4M', 'nc|ENSG00000104938|Q9H2X3-5|CLEC4M', 'nc|ENSG00000104938|Q9H2X3-8|CLEC4M', 'ENSG00000104938|ENST00000327325|CLEC4M'] 79286 4228 PGHSLTPPPS True H1975_Epitope_Rep2 988.4977949122 988.49668993586 21.371 2 -0.9805380623328074 0.2954030736047452 1.0 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 137426 25342 YLLVKITRLG True PC9_epitope_Rep3 1174.74377926434 1174.7426899358602 102.9 2 -0.9805628190470896 0.2954030736047452 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 65822 11075 LSKGLTNP True PC9_epitope_Rep2 828.4705175352001 828.46942993586 47.918 2 -0.9805753610395473 0.2954030736047452 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF', 'nc|ENSG00000072121|Q68DK2-3|ZFYVE26', 'ENST00000394455.6_1_14:68196461-68236507:-|nuORF'] 62090 15911 LLNIKHDET True PC9_epitope_Rep4 1081.57677350889 1081.57566993586 69.129 2 -0.9806081472496297 0.29541257195238674 1.0 ['nc|ENSG00000189180|Q06730|ZNF33A', 'ENSG00000189180|ENST00000432900|ZNF33A', 'nc|ENSG00000189180|Q06730-3|ZNF33A', 'ZNF33A|p.Y440Mfs*12|1|0.2|ENSG00000189180|chr10:38055445-38055445|T/-|frameshift_variant', 'ZNF33B|p.K747Sfs*26|1|0.18|ENSG00000196693|chr10:42592710-42592710|T/-|frameshift_variant', 'ZNF33A|p.R768Kfs*10|2|0.23|ENSG00000189180|chr10:38056427-38056428|AG/-|frameshift_variant', 'ENSG00000196693|ENST00000359467|ZNF33B'] 25011 21767 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 88.561 2 -0.9806650238409376 0.2954625111212963 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 32357 201 GGDEEDEEGYN True NCI_RA007_Epitope_Rep1 1212.4054702186397 1212.4043699358601 1.0697 2 -0.9806957776328727 0.29550846543729103 1.0 ['nc|ENSG00000248546|O43423|ANP32CP'] 46987 12203 IVPFYDCYEP True PC9_epitope_Rep1 1244.54236214612 1244.54071490379 51.797 3 -0.9807170563112829 0.29550846543729103 1.0 ['nc|ENSG00000137944|Q6YP21-3|KYAT3', 'ENSG00000137944|ENST00000260508|KYAT3'] 24854 18597 FDDGDCCD True H1975_Epitope_Rep1 888.226583982 888.22548993586 77.547 2 -0.9808161481981572 0.29555441727549675 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 68479 8838 LTVFWLWQTM True H1975_Epitope_Rep1 1323.6685657187497 1323.66746993586 38.919 2 -0.9808508022122081 0.29555441727549675 1.0 ['ENST00000248598.5_1_7:76828986-76829070:-|nuORF'] 114329 12674 TSDAVVMP True PC9_epitope_Rep1 818.3844049527399 818.38330993586 53.621 2 -0.9809053527232806 0.29557739226549123 1.0 ['ENSG00000126870|ENST00000407559|DYNC2I1'] 33482 17096 GLGRPCRGIP True PC9_epitope_Rep4 1024.5600183292797 1024.55892993586 73.759 2 -0.98092218666709 0.29560986130019273 1.0 ['nc|ENSG00000185252|Q16587-5|ZNF74', 'ENST00000493734.5_1_22:20749431-20759943:+|nuORF'] 43194 10981 IGTHTEKVS True PC9_epitope_Rep1 970.5083595959 970.50726993586 47.128 2 -0.9809442675480524 0.29560986130019273 1.0 ['ENSG00000155307|ENST00000400566|SAMSN1', 'nc|ENSG00000155307|Q9NSI8-3|SAMSN1'] 111300 16844 TLHLLVLV True PC9_epitope_Rep1 906.59023874506 906.58914993586 69.615 2 -0.9810046849087193 0.29563283461382933 1.0 ['nc|ENSG00000104951|Q96RQ9-2|IL4I1'] 122434 6411 VGSKTKEGV True PC9_epitope_Rep5 903.5025459394699 903.50144993586 29.637 2 -0.9810405676861363 0.29564232858432965 1.0 ['nc|ENSG00000145335|P37840-2|SNCA', 'ENSG00000145335|ENST00000394991|SNCA'] 69957 5054 LYEFPEYSRDP True H1975_Epitope_Rep3 1414.6404959642598 1414.63885490379 24.562 3 -0.9810698243307245 0.295665300841061 1.0 ['ENSG00000165097|ENST00000650836|KDM1B'] 44579 13078 IPFMYLFSI True PC9_epitope_Rep1 1129.58819013973 1129.5865349037902 55.172 3 -0.9810983744934608 0.29570175083902794 1.0 ['nc|ENSG00000112414|Q86SQ4-2|ADGRG6', 'nc|ENSG00000112414|Q86SQ4|ADGRG6', 'nc|ENSG00000112414|Q86SQ4-4|ADGRG6', 'ENSG00000112414|ENST00000367609|ADGRG6', 'ENST00000472054.2_1_6:142738255-142764649:+|nuORF'] 123780 13627 VISSAELRLF True PC9_epitope_Rep1 1133.64445914589 1133.64280490379 57.273 3 -0.981181521612852 0.29575718367566983 1.0 ['ENSG00000125378|ENST00000245451|BMP4'] 108196 7226 TDWNTRTVEK True NCI_RA007_Epitope_Rep2 1248.6098645423197 1248.6087699358602 32.726 2 -0.9812157624483329 0.29575718367566983 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 121283 9839 VGHALCRG True NCI_RA007_Epitope_Rep3 811.41229146643 811.41118993586 45.774 2 -0.9812721644190074 0.29575718367566983 1.0 ['ISX|p.P7H|1|0.44|ENSG00000175329|chr22:35067107-35067107|C/A|missense_variant'] 66663 9225 LSSSTTTHNRP True NCI_RA007_Epitope_Rep2 1199.58946345091 1199.58836993586 40.492 2 -0.9813580184417547 0.2958086253369272 1.0 ['ENST00000278025.8_1_10:135168706-135168871:-|nuORF'] 57431 7435 LEILNPTA True H1975_Epitope_Rep3 869.48583324617 869.48472993586 33.577 2 -0.9813872736648881 0.2958086253369272 1.0 ['SNAI1|p.P47L|1|0.4|ENSG00000124216|chr20:49983881-49983881|C/T|missense_variant'] 60003 8424 LHQNSPVL True PC9_epitope_Rep3 906.49231560894 906.49120993586 37.367 2 -0.9813880413465323 0.2958086253369272 1.0 ['nc|ENSG00000186075|Q6X784-2|ZPBP2', 'ENSG00000186075|ENST00000348931|ZPBP2'] 60095 7737 LHTDQVLAHPV True NCI_RA007_Epitope_Rep2 1228.65642081192 1228.6553299358602 34.721 2 -0.981422445108387 0.2958086253369272 1.0 ['ENST00000336926.10_1_7:75166652-75166730:-|nuORF'] 136701 21128 YIHQKKHSL True NCI_RA007_Epitope_Rep5 1152.64037682496 1152.63874490379 88.29 3 -0.9814549529880804 0.2958181156588186 1.0 ['ENST00000367765.5_1_1:170015969-170024554:-|nuORF'] 120403 16026 VFSPDQFQRL True PC9_epitope_Rep4 1235.6298717109098 1235.62822490379 69.576 3 -0.9814942644665907 0.295850572079296 1.0 ['nc|ENSG00000197006|Q9H1A3-2|METTL9', 'ENSG00000197006|ENST00000358154|METTL9'] 52701 16169 KQKLLLKKRHI True H1975_Epitope_Rep2 1403.94527303555 1403.9436149037901 67.405 3 -0.9814951597192354 0.295850572079296 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 58732 18105 LFLILALEERA True NCI_RA007_Epitope_Rep2 1286.7598232512998 1286.7587299358602 75.176 2 -0.9815776695845702 0.29586006145221283 1.0 ['ENST00000512845.5_1_4:121737455-121843799:-|nuORF'] 44561 9885 IPDVLRPVP True H1975_Epitope_Rep3 1004.6018660579199 1004.60076993586 43.054 2 -0.9816389517993882 0.295883026750219 1.0 ['ENSG00000087903|ENST00000303657|RFX2', 'nc|ENSG00000087903|P48378-2|RFX2'] 18917 8417 ELERLHPI True PC9_epitope_Rep1 1005.5607295219299 1005.55962993586 37.212 2 -0.9816724599963973 0.2959154796717291 1.0 ['ENST00000610158.1_1_10:25242209-25242413:+|nuORF'] 97116 15559 SFDWYLKNVFP True PC9_epitope_Rep1 1414.6921376143 1414.69104993586 64.671 2 -0.9816905398907801 0.2959154796717291 1.0 ['nc|ENSG00000257594|Q8N4A0-2|GALNT4', 'ENST00000547474.1_3_12:89916592-89919989:-|nuORF', 'ENSG00000257594|ENST00000529983|GALNT4'] 65685 5751 LSHFGSHIHHS True H1975_Epitope_Rep3 1257.6003029181302 1257.59920993586 27.148 2 -0.9817223871467153 0.2959249676584735 1.0 ['ENST00000465343.2_1_7:63768387-63768672:+|nuORF'] 115969 16548 TVQDIQALEHK True PC9_epitope_Rep1 1280.6724647988801 1280.6713699358602 68.476 2 -0.9817718832426798 0.2959479308439677 1.0 ['PEX12|p.I341Sfs*11|1|0.21|ENSG00000108733|chr17:35575842-35575842|G/-|frameshift_variant', 'ENSG00000108733|ENST00000225873|PEX12'] 85765 20853 QLVRHRLFRE True H1975_Epitope_Rep3 1352.7789359864398 1352.7772949037899 87.1 3 -0.9819118055191413 0.2959629170484558 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 109109 6880 TFGGLLGEKTR True NCI_RA007_Epitope_Rep5 1177.64552177505 1177.64386490379 33.144 3 -0.9819798940845234 0.2959629170484558 1.0 ['ENSG00000004939|ENST00000262418|SLC4A1', 'nc|ENSG00000004939|P02730-2|SLC4A1'] 70664 3744 MCTRPPAS True PC9_epitope_Rep2 861.3836937600898 861.38258993586 19.666 2 -0.982014532621439 0.2959629170484558 1.0 ['ENST00000263207.7_1_22:19978271-20004293:-|nuORF'] 14660 12115 DVNDHAPEL True PC9_epitope_Rep1 1008.4512386426 1008.4501499358599 51.462 2 -0.9820830694664746 0.2959928858228462 1.0 ['ENSG00000248383|ENST00000253807|PCDHAC1', 'nc|ENSG00000248383|Q9H158-2|PCDHAC1'] 88030 18843 QVSVPACL True H1975_Epitope_Rep1 815.4211248146299 815.4205749679301 78.576 1 -0.9820894673102327 0.2959928858228462 1.0 ['ENST00000606952.5_1_1:156203463-156206310:+|nuORF'] 40700 5743 HTPSGNIL True PC9_epitope_Rep4 837.43446637965 837.43336993586 28.921 2 -0.9821223595295577 0.2959928858228462 1.0 ['ENSG00000162391|ENST00000302250|FAM151A'] 17121 6626 EGSVFMETQML True NCI_RA007_Epitope_Rep2 1270.5573605872598 1270.5562699358602 30.384 2 -0.9821416276020803 0.2959928858228462 1.0 ['ENSG00000155115|ENST00000329970|GTF3C6'] 15968 7422 EDVRLIREQH True NCI_RA007_Epitope_Rep1 1293.6789471616498 1293.67729490379 32.867 3 -0.98214638348329 0.2959928858228462 1.0 ['ENST00000564638.1_1_16:87426033-87432506:+|nuORF', 'ENST00000564844.1_1_16:87426873-87433248:+|nuORF', 'ENSG00000258102|ENST00000556529|MAP1LC3B2', 'ENSG00000140941|ENST00000268607|MAP1LC3B'] 77721 8075 PAAIPTSA True PC9_epitope_Rep2 726.39120458534 726.39065496793 36.42 1 -0.9821559717652334 0.2959928858228462 1.0 ['ENSG00000085185|ENST00000540052|BCORL1', 'nc|ENSG00000085185|Q5H9F3-4|BCORL1', 'nc|ENSG00000085185|Q5H9F3-1|BCORL1', 'BCORL1|p.M644Cfs*4|1|0.16|ENSG00000085185|chrX:130014696-130014696|C/-|frameshift_variant'] 76729 23894 NTQISLSLYF True PC9_epitope_Rep2 1184.607739284 1184.60664993586 97.387 2 -0.9822100545338779 0.29600237136043334 1.0 ['ENST00000428388.6_1_6:32135933-32136035:+|nuORF'] 64833 8769 LSAHKISGNF True NCI_RA007_Epitope_Rep3 1072.56654317836 1072.5654499358602 41.582 2 -0.9822891363035238 0.2960308264396001 1.0 ['ENST00000488290.5_1_10:30602540-30654262:-|nuORF', 'nc|ENSG00000107951|Q9NVV4-2|MTPAP', 'ENSG00000107951|ENST00000263063|MTPAP'] 120701 14328 VGARESLSL True PC9_epitope_Rep5 930.51344497634 930.51234993586 60.113 2 -0.9823038028704023 0.2960308264396001 1.0 ['ENST00000413670.2_1_1:98510427-98510946:-|nuORF', 'ENST00000602984.1_1_1:98510427-98511708:-|nuORF'] 134777 5904 WYFGAYSIVA True PC9_epitope_Rep2 1175.56514619603 1175.56404993586 28.105 2 -0.9823147754667082 0.2960308264396001 1.0 ['ENSG00000051523|ENST00000261623|CYBA', 'ENST00000562209.1_1_16:88713507-88717421:-|nuORF', 'ENST00000566534.5_1_16:88713161-88717421:-|nuORF'] 65697 13709 LSHLCEFI True PC9_epitope_Rep6 960.47388866348 960.47278993586 64.52 2 -0.9823308406351251 0.2960323341192321 1.0 ['ENSG00000181789|ENST00000314797|COPG1', 'ENST00000513410.1_1_3:128982773-128985943:+|nuORF'] 119964 7203 VEYRLVQS True PC9_epitope_Rep1 992.5290950404799 992.52798993586 32.521 2 -0.9823410418385798 0.2960323341192321 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant', 'PLXNA3|p.S956Lfs*51|1|0.53|ENSG00000130827|chrX:154466439-154466440|-/T|frameshift_variant'] 72717 12496 MYQEHINEI True PC9_epitope_Rep1 1175.52810906431 1175.5270099358602 52.934 2 -0.982395651782121 0.2960323341192321 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'POLE|p.D1405N|1|0.22|ENSG00000177084|chr12:132643914-132643914|C/T|missense_variant'] 24878 828 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 4.3983 2 -0.9824037549301986 0.2960418182308086 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 36798 18062 GVPNYPGLFLP True PC9_epitope_Rep1 1172.62299542532 1172.6213549037902 74.268 3 -0.9824102726184856 0.2960488205736148 1.0 ['ENST00000261254.7_1_12:4412550-4412766:+|nuORF'] 41778 5131 IDQRLHIHMYF True H1975_Epitope_Rep1 1471.73943924323 1471.73779490379 24.806 3 -0.9824287293604695 0.2960488205736148 1.0 ['OR6T1|p.Q58H|1|0.08|ENSG00000181499|chr11:123943665-123943665|C/G|missense_variant'] 37329 12896 GVVTSHLSV True PC9_epitope_Rep1 897.4919812557699 897.49088993586 54.477 2 -0.9824466826699023 0.2960488205736148 1.0 ['ENST00000480456.5_1_21:27087792-27087933:+|nuORF'] 58266 9100 LETANRQL True PC9_epitope_Rep2 943.50869394907 943.50758993586 40.344 2 -0.9824562831977345 0.2960488205736148 1.0 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1', 'AMOTL1|p.R521Q|1|0.07|ENSG00000166025|chr11:94831455-94831455|G/A|missense_variant'] 137427 25384 YLLVKITRLG True PC9_epitope_Rep5 1174.74377926434 1174.7426899358602 102.86 2 -0.9824583723683475 0.2960488205736148 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 76917 7456 NVLNVYFVK True NCI_RA007_Epitope_Rep5 1094.61243074162 1094.61132993586 35.359 2 -0.9825729667598476 0.2961216709549661 1.0 ['ENSG00000197296|ENST00000396825|FITM2'] 28496 6866 FSGDLDDQTC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep1 1312.53537955215 1312.5342899358602 30.711 2 -0.9825868574819705 0.2961216709549661 1.0 ['ENSG00000138385|ENST00000260956|SSB', 'ENST00000470621.1_1_2:170665037-170666957:+|nuORF', 'ENST00000438469.2_1_1:146553889-146554591:-|nuORF'] 13465 9627 DPAVSKELAK True NCI_RA007_Epitope_Rep5 1056.5815245361598 1056.5804299358601 43.672 2 -0.9826930842706109 0.29613115284101627 1.0 ['ENST00000428288.2_1_7:27565835-27702463:-|nuORF', 'ENSG00000106049|ENST00000265395|HIBADH'] 131571 22951 VVVRKREGL True H1975_Epitope_Rep3 1054.66111226954 1054.6600099358602 95.887 2 -0.9827218457846882 0.2961381484125594 1.0 ['nc|ENSG00000188677|Q9HBI1-3|PARVB', 'ENSG00000188677|ENST00000338758|PARVB', 'nc|ENSG00000188677|Q9HBI1-2|PARVB'] 62739 17074 LLYNCWQRR True PC9_epitope_Rep6 1250.6342458986999 1250.63314993586 78.244 2 -0.9827766614778584 0.2961381484125594 1.0 ['ENSG00000114631|ENST00000342480|PODXL2', 'nc|ENSG00000114631|Q9NZ53-2|PODXL2'] 135380 16346 YDIWHRRHDYW True NCI_RA007_Epitope_Rep2 1645.75384343741 1645.75274993586 68.31 2 -0.9827935119279145 0.2961381484125594 1.0 ['ENSG00000116254|ENST00000262450|CHD5'] 3160 8824 AGEDRPDVSI True PC9_epitope_Rep1 1057.50400249145 1057.50290993586 38.783 2 -0.9828161811788166 0.2961381484125594 1.0 ['nc|ENSG00000147121|Q5JUW0-3|KRBOX4'] 115519 12513 TVGPQPTPSIP True PC9_epitope_Rep1 1092.58152453616 1092.5804299358601 52.999 2 -0.9828945498094757 0.2961381484125594 1.0 ['ENSG00000224940|ENST00000446477|PRRT4', 'nc|ENSG00000224940|C9JH25-3|PRRT4', 'nc|ENSG00000224940|C9JH25-2|PRRT4'] 82645 18687 PVLPAHLL True PC9_epitope_Rep1 858.53272386894 858.53162993586 76.67 2 -0.9829569147940131 0.29616109913793104 1.0 ['ENST00000442440.1_1_20:23337408-23337708:-|nuORF'] 2054 9863 AELERNVAL True PC9_epitope_Rep4 1013.55055876105 1013.54946993586 45.589 2 -0.9834345580576878 0.29643997252192184 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 3485 8279 AGLQEVRPAL True PC9_epitope_Rep4 1052.5978433066398 1052.59674993586 39.306 2 -0.9835418014754485 0.29650230979541814 1.0 ['ENST00000445935.5_2_21:47737957-47742843:-|nuORF', 'ENST00000397680.5_1_21:47737957-47743164:-|nuORF', 'ENST00000397682.7_1_21:47737957-47742843:-|nuORF'] 100697 11744 SLRDQLLV True PC9_epitope_Rep4 942.5498304850599 942.54872993586 52.933 2 -0.9835442816476152 0.29650230979541814 1.0 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 56682 7978 LEAECRLRCPR True H1975_Epitope_Rep1 1344.6754590876799 1344.67436993586 35.637 2 -0.9835580708742798 0.29650230979541814 1.0 ['ENST00000528182.5_2_11:111957606-111959624:+|nuORF', 'ENST00000528048.5_2_11:111957606-111965694:+|nuORF'] 4497 16963 AKKKKKKKKG True PC9_epitope_Rep2 1170.8288463009796 1170.82720490379 70.496 3 -0.9835782242336054 0.29650230979541814 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 89542 3454 RERPPEEVAA True NCI_RA007_Epitope_Rep5 1152.58873517492 1152.5870849037901 19.04 3 -0.9835951345481627 0.29650230979541814 1.0 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000409258.2_1_2:86386442-86398424:-|nuORF'] 80761 11709 PLSFHWACV True PC9_epitope_Rep3 1058.5007721176598 1058.49966993586 50.057 2 -0.9835965755404261 0.29650230979541814 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 34578 14046 GQGDERDMQL True PC9_epitope_Rep1 1147.49278618475 1147.4916899358602 58.865 2 -0.9836000664227664 0.29650230979541814 1.0 ['ENSG00000092148|ENST00000399332|HECTD1', 'ENST00000556474.1_1_14:31672823-31675142:-|nuORF', 'HECTD1|p.L328Ffs*29|1|0.3|ENSG00000092148|chr14:31173328-31173329|-/AA|frameshift_variant'] 93542 23469 RSPRGILG True PC9_epitope_Rep4 854.5086343794198 854.50752993586 98.561 2 -0.983606306170463 0.29650230979541814 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 104351 20302 SSFCPPDD True NCI_RA007_Epitope_Rep2 866.3116339352998 866.31052993586 84.0 2 -0.9836500833223478 0.2965442008296073 1.0 ['ENSG00000161905|ENST00000293761|ALOX15', 'nc|ENSG00000161905|P16050-2|ALOX15', 'ALOX15|p.A448V|1|0.15|ENSG00000161905|chr17:4633221-4633221|G/A|missense_variant'] 111158 4610 TLETKALN True NCI_RA007_Epitope_Rep3 888.4916469025999 888.49054993586 25.048 2 -0.9836559684815221 0.2965442008296073 1.0 ['nc|ENSG00000106701|Q9BXM9-2|FSD1L', 'ENSG00000106701|ENST00000481272|FSD1L'] 83541 6942 QDLSKAPEP True H1975_Epitope_Rep2 983.4923751785899 983.49126993586 31.622 2 -0.9836589203352017 0.2965442008296073 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 43479 6987 IHVFRRRVTDP True H1975_Epitope_Rep2 1394.78950067014 1394.78785490379 31.799 3 -0.9836742876867685 0.29656714206833396 1.0 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 13676 7007 DQEEMWGQEKK True H1975_Epitope_Rep1 1406.6136295934195 1406.61252993586 31.987 2 -0.9837533600321258 0.29659008268914805 1.0 ['ENSG00000174450|ENST00000567107|GOLGA6L2', 'nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2'] 74359 10152 NISCKASQDI True PC9_epitope_Rep6 1077.5124590001699 1077.51136993586 49.673 2 -0.9837991700080564 0.2966224951519069 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 21762 11836 ESDEMRPCWFQ True H1975_Epitope_Rep2 1426.56457122602 1426.5634699358602 50.603 2 -0.983817719537203 0.2966224951519069 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 140043 3520 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 17.824 3 -0.9838360036808493 0.29662797274367747 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 73549 11609 NFNYEQRG True PC9_epitope_Rep1 1026.4519073489398 1026.4508099358602 49.533 2 -0.9838519288865198 0.29662797274367747 1.0 ['nc|ENSG00000166181|Q9BZZ5-6|API5', 'ENSG00000166181|ENST00000531273|API5'] 36928 14752 GVRCAGGH True NCI_RA007_Epitope_Rep4 755.3496912098699 755.3491449679301 64.197 1 -0.9838842813997905 0.29662945556887194 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B'] 30725 7236 GAMESGRVSSI True PC9_epitope_Rep5 1092.52335803704 1092.52226993586 32.796 2 -0.983890494557585 0.29662945556887194 1.0 ['ENSG00000235034|ENST00000425202|C19orf81'] 10141 20535 CCCCCCRWCTS True H1975_Epitope_Rep3 1269.3349890228099 1269.33334490379 85.837 3 -0.9838933907059509 0.29662945556887194 1.0 ['ENST00000519715.1_1_5:140012405-140013200:-|nuORF'] 43967 7146 ILGAQVSEAVP True H1975_Epitope_Rep3 1082.5971746003 1082.5960699358602 32.459 2 -0.9839178509322014 0.2966389270420942 1.0 ['ENSG00000124370|ENST00000244217|MCEE'] 129751 4306 VTKKVKIRK True PC9_epitope_Rep3 1098.76009803482 1098.7590099358601 21.673 2 -0.9839739358894726 0.29665387463812026 1.0 ['ENST00000376395.8_2_9:86276119-86276320:-|nuORF'] 14666 4559 DVNFQQYFWNR True H1975_Epitope_Rep3 1515.68951184535 1515.6884099358601 22.656 2 -0.9839745543437999 0.29665387463812026 1.0 ['ENST00000461696.1_1_3:15823132-15838055:-|nuORF'] 23793 4906 EYLCRQHADP True H1975_Epitope_Rep2 1230.54515611078 1230.5440499358601 23.954 2 -0.9839985530775482 0.29665387463812026 1.0 ['ENSG00000116819|ENST00000373235|TFAP2E'] 118189 6361 VAVVAHGP True NCI_RA007_Epitope_Rep5 748.4231734199599 748.42206993586 31.142 2 -0.9840656535599641 0.2966768103842943 1.0 ['ENSG00000130147|ENST00000392011|SH3BP4', 'nc|ENSG00000130147|Q9P0V3-2|SH3BP4'] 38261 10013 HFDQLVAA True PC9_epitope_Rep6 899.4501164437899 899.44900993586 49.082 2 -0.9840848217502292 0.2966822857758388 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 45232 10274 IRMCPYYEEWP True NCI_RA007_Epitope_Rep2 1485.64209327073 1485.64098993586 44.554 2 -0.9840852278967491 0.2966822857758388 1.0 ['ENSG00000176571|ENST00000518476|CNBD1'] 131073 24657 VVLTPSVLTV True PC9_epitope_Rep4 1026.63249747986 1026.6314099358601 103.34 2 -0.9841461173703123 0.296724158823767 1.0 ['ENST00000414082.1_3_20:33292571-33293222:+|nuORF'] 11554 5912 DGPKGASGP True NCI_RA007_Epitope_Rep2 784.3715317699199 784.37042993586 27.613 2 -0.9841537738118892 0.296724158823767 1.0 ['nc|ENSG00000139219|P02458-1|COL2A1', 'ENSG00000139219|ENST00000380518|COL2A1', 'ENST00000493991.5_1_12:48375847-48382223:-|nuORF', 'COL2A1|p.G738V|1|0.23|ENSG00000139219|chr12:47982590-47982590|C/A|missense_variant'] 19919 7245 ELYEHWKTLM True H1975_Epitope_Rep1 1348.64855855016 1348.64746993586 32.878 2 -0.9841774954280539 0.296724158823767 1.0 ['ENSG00000069431|ENST00000261200|ABCC9', 'nc|ENSG00000069431|O60706|ABCC9'] 85269 20986 QKRKKEKP True H1975_Epitope_Rep2 1040.6454622053998 1040.6443699358601 86.871 2 -0.9842168652499068 0.2967336277466609 1.0 ['NMT2|p.R318Efs*3|1|0.19|ENSG00000152465|chr10:15128397-15128397|T/-|frameshift_variant', 'NMT2|p.N356Ifs*5|1|0.16|ENSG00000152465|chr10:15119425-15119446|TGAAACTGCTTCAGGTAAGTGT/-|frameshift_variant', 'ENSG00000152465|ENST00000378165|NMT2', 'ENST00000378150.1_1_10:15177331-15210611:-|nuORF'] 229 19553 AAGAPNLVLAA True PC9_epitope_Rep1 966.5498304850599 966.54872993586 80.035 2 -0.984236183311997 0.2967700241002787 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 22594 6344 ETPQTVPA True PC9_epitope_Rep1 841.4181476091699 841.41704993586 29.213 2 -0.9843020785960624 0.2967794921506853 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 24014 17007 EYPENLPTLK True NCI_RA007_Epitope_Rep1 1202.6183039677 1202.61720993586 70.28 2 -0.9843087533207446 0.2967849641876245 1.0 ['nc|ENSG00000174501|Q5JPF3|ANKRD36C', 'ENSG00000174501|ENST00000295246|ANKRD36C', 'nc|ENSG00000135976|A6QL64-3|ANKRD36', 'ENST00000421946.2_1_2:97879127-97913404:+|nuORF', 'nc|ENSG00000174501|Q5JPF3-2|ANKRD36C', 'ENSG00000135976|ENST00000420699|ANKRD36', 'nc|ENSG00000174501|Q5JPF3-3|ANKRD36C', 'ENST00000534304.5_1_2:96525807-96601268:-|nuORF'] 52915 11903 KRIDNLLKYFY True NCI_RA007_Epitope_Rep5 1471.81873510975 1471.8170849037901 52.442 3 -0.9843102333605619 0.2967849641876245 1.0 ['ENST00000477822.2_1_6:153291978-153292182:-|nuORF'] 25012 22528 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 91.456 2 -0.9843561519601198 0.2968078947722714 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 123061 7661 VGYTWIPML True PC9_epitope_Rep5 1078.55213898418 1078.5510499358602 34.413 2 -0.9843696291213138 0.2968173618029565 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 109238 11603 TFVVFLVLYMI True PC9_epitope_Rep2 1343.7563180939899 1343.75467490379 49.956 3 -0.9843937844458984 0.29682682857873693 1.0 ['OR4C12|p.W300*|1|0.34|ENSG00000221954|chr11:49981602-49981602|C/-|frameshift_variant', 'OR4C12|p.V304Sfs*5|1|0.39|ENSG00000221954|chr11:49981592-49981593|-/T|frameshift_variant', 'ENSG00000221954|ENST00000335238|OR4C12'] 91179 9429 RLPTPEQI True PC9_epitope_Rep4 952.5341804209199 952.53308993586 43.879 2 -0.984577581319787 0.2968512311026749 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 114933 12029 TTFIDMQWRYK True H1975_Epitope_Rep1 1487.7231204727498 1487.72202993586 51.279 2 -0.9845865214760545 0.2968512311026749 1.0 ['ENSG00000177807|ENST00000644903|KCNJ10'] 2053 11617 AELERNVAL True PC9_epitope_Rep3 1013.55055876105 1013.54946993586 49.701 2 -0.9846081175742764 0.2968512311026749 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 85393 16012 QLEEEACAC True PC9_epitope_Rep1 994.3735825688598 994.37248993586 66.402 2 -0.9846438842608837 0.2968512311026749 1.0 ['ENSG00000164325|ENST00000296776|TMEM174'] 127338 6930 VQNSFYKLSPP True NCI_RA007_Epitope_Rep1 1278.6608374860198 1278.6597499358602 30.96 2 -0.9847239014886611 0.2969010823326692 1.0 ['ENSG00000165066|ENST00000518699|NKX6-3'] 120730 18509 VGATIGFSLV True PC9_epitope_Rep4 962.54368247546 962.5431349679301 79.268 1 -0.9848613805924122 0.2969643938884028 1.0 ['ENSG00000144136|ENST00000272542|SLC20A1'] 76613 7564 NTFYQRLK True NCI_RA007_Epitope_Rep1 1068.5716285587998 1068.5705299358601 33.414 2 -0.9849673520341381 0.2969738577928546 1.0 ['ENSG00000079257|ENST00000264265|LXN'] 104659 7287 SSYVFYWRDYF True H1975_Epitope_Rep2 1531.67721582615 1531.67610993586 32.967 2 -0.9850758523727166 0.29702370535894573 1.0 ['ENSG00000113272|ENST00000231198|THG1L'] 25777 20449 FFTVIFQWLKV True PC9_epitope_Rep1 1426.80129414046 1426.80018993586 83.467 2 -0.9850945083747444 0.29703863238659306 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 82858 12841 PVTTEITSLD True PC9_epitope_Rep5 1074.5444703211 1074.54387496793 54.403 1 -0.9850984328438602 0.29703863238659306 1.0 ['ENSG00000023318|ENST00000262455|ERP44'] 111487 18832 TLLLAAHKTV True PC9_epitope_Rep5 1065.6546299067702 1065.6535299358602 77.452 2 -0.9851355451252548 0.29703863238659306 1.0 ['nc|ENSG00000084734|Q14397|GCKR', 'ENSG00000084734|ENST00000264717|GCKR'] 65620 14101 LSGLSWERSR True PC9_epitope_Rep5 1189.62036965637 1189.61926993586 59.251 2 -0.9852256239071583 0.29708594118042936 1.0 ['ENST00000299498.10_1_11:7694653-7694722:-|nuORF'] 117618 19343 VAHKKRKMAL True NCI_RA007_Epitope_Rep5 1180.7226669802799 1180.72156993586 81.282 2 -0.9852330401965091 0.29708594118042936 1.0 ['nc|ENSG00000140379|Q16548-2|BCL2A1'] 13507 18975 DPFSRHRVWS True PC9_epitope_Rep6 1285.6316030464097 1285.6305099358601 85.632 2 -0.9852429214489374 0.29708594118042936 1.0 ['nc|ENSG00000154263|Q8WWZ4-2|ABCA10', 'ENSG00000154263|ENST00000690296|ABCA10'] 77655 12032 NYYSTLSFT True PC9_epitope_Rep5 1094.49204082542 1094.49094993586 51.275 2 -0.9852863352283524 0.29708594118042936 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 11823 16654 DHMLIPVSM True PC9_epitope_Rep5 1041.4987235123301 1041.49762993586 69.064 2 -0.985315010424298 0.29708594118042936 1.0 ['nc|ENSG00000153904|O94760-2|DDAH1', 'ENSG00000153904|ENST00000284031|DDAH1'] 15245 7201 EAGEQKPPSL True PC9_epitope_Rep5 1054.5294889632999 1054.52838993586 32.664 2 -0.9853625018070069 0.2971357811995262 1.0 ['ENST00000263401.9_1_11:36295935-36296034:-|nuORF'] 85840 6355 QMRWRNEKDVW True H1975_Epitope_Rep3 1546.7463155288199 1546.7452099358602 29.436 2 -0.9853790841693245 0.29714524139601867 1.0 ['ENST00000225388.8_1_17:27585167-27585341:-|nuORF'] 5223 3951 ALQATEEK True NCI_RA007_Epitope_Rep2 888.4552613938799 888.45416993586 20.006 2 -0.9853970942094871 0.29716016150740243 1.0 ['ENSG00000101004|ENST00000278886|NINL', 'nc|ENSG00000101004|Q9Y2I6-2|NINL', 'ENST00000464285.5_1_20:25434089-25439234:-|nuORF'] 123755 5454 VISAFWPSL True H1975_Epitope_Rep3 1018.5487678559 1018.54766993586 26.035 2 -0.9854018606867353 0.29716016150740243 1.0 ['ENST00000296380.8_1_1:40974436-40975435:+|nuORF', 'ENST00000415550.5_2_1:40974549-40975435:+|nuORF'] 14949 14341 DYPVDTIA True H1975_Epitope_Rep1 892.4178132559999 892.41726496793 60.353 1 -0.9854310296330163 0.29716016150740243 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'nc|ENSG00000166349|P15918-2|RAG1'] 127005 9961 VPWSRWSCCK True PC9_epitope_Rep5 1250.5688687608201 1250.56776993586 43.29 2 -0.9854665611734239 0.2972099971736585 1.0 ['ENST00000422671.1_2_20:34095879-34099213:+|nuORF'] 50509 12765 KKKKKKKTLIY True NCI_RA007_Epitope_Rep4 1404.9544407369199 1404.95278490379 56.16 3 -0.9855304463815514 0.297215455634362 1.0 ['ENST00000297857.3_1_8:124261964-124262105:-|nuORF'] 140857 17373 YYTISQRA True H1975_Epitope_Rep3 1000.4977949121998 1000.49727496793 72.485 1 -0.9855392540924094 0.297215455634362 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 25781 18353 FFTVIFQWLKV True PC9_epitope_Rep6 1426.80129414046 1426.80018993586 83.237 2 -0.9855626195065732 0.2972518303186908 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 60024 21984 LHRLGGGGG True PC9_epitope_Rep6 822.4460341228598 822.44548496793 97.483 1 -0.9856408462132626 0.29727474597940917 1.0 ['ENST00000492981.1_1_3:113465783-113465960:-|nuORF'] 78519 7858 PDKPGIPV True PC9_epitope_Rep5 821.4647038787699 821.46360993586 35.169 2 -0.9857028832760208 0.297307117768178 1.0 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 97278 12823 SFQLHQTLTWP True H1975_Epitope_Rep1 1356.68263555976 1356.68152993586 54.389 2 -0.9857100493028057 0.297307117768178 1.0 ['ENST00000295190.8_1_2:230933391-230933565:-|nuORF'] 13522 5084 DPGVPLSP True H1975_Epitope_Rep1 780.4017692690401 780.40066993586 24.627 2 -0.9857380098295001 0.29733003175970285 1.0 ['ENST00000587492.5_1_19:56826132-56826201:-|nuORF'] 110906 6771 TLANSASKDY True H1975_Epitope_Rep2 1068.50875351872 1068.5076499358602 30.96 2 -0.9859819855846057 0.2974471463752708 1.0 ['NWD1|p.G1273Afs*12|2|0.44|ENSG00000188039|chr19:16807665-16807665|G/-|frameshift_variant', 'ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 101849 9539 SPKPRRRRRHW True PC9_epitope_Rep3 1530.88686372598 1530.88465987172 41.638 4 -0.9860145317962231 0.2974566007266855 1.0 ['ENST00000344686.6_1_17:43367939-43368083:-|nuORF'] 42294 6922 IEKDMLRYYYY True PC9_epitope_Rep1 1555.73810183055 1555.73644490379 31.431 3 -0.9860274153561098 0.29746205188933145 1.0 ['DNAH7|p.I161M|2|0.19|ENSG00000118997|chr2:196027963-196027963|G/C|missense_variant'] 46437 14898 ITLLRHYRNPW True H1975_Epitope_Rep1 1467.80990176155 1467.8088099358602 62.542 2 -0.9860328885232925 0.29746205188933145 1.0 ['nc|ENSG00000136715|Q9H0E3|SAP130', 'ENSG00000136715|ENST00000643581|SAP130', 'nc|ENSG00000136715|Q9H0E3-3|SAP130', 'nc|ENSG00000136715|Q9H0E3-2|SAP130'] 66563 8202 LSSLATAKSI True NCI_RA007_Epitope_Rep1 989.57571087973 989.5746099358599 35.901 2 -0.9860392233881238 0.297467502758565 1.0 ['ENSG00000177602|ENST00000325418|HASPIN'] 56886 9360 LEDMLLFP True PC9_epitope_Rep2 976.49395540172 976.49284993586 41.339 2 -0.9860454235286382 0.297467502758565 1.0 ['ENST00000602772.5_1_X:73289164-73289383:+|nuORF'] 22014 4083 ESPSEERLEPK True NCI_RA007_Epitope_Rep4 1299.63065955655 1299.62902490379 21.983 3 -0.9861522578706979 0.29750386866716005 1.0 ['nc|ENSG00000156030|Q6PJG2|MIDEAS', 'ENSG00000156030|ENST00000423556|MIDEAS'] 14162 12795 DSLVIEYNRVN True PC9_epitope_Rep1 1320.6673794184399 1320.66628993586 54.09 2 -0.9861759809530316 0.297518770688124 1.0 ['ENST00000461464.1_1_4:57576495-57576777:+|nuORF'] 18165 4730 EIPELRNK True NCI_RA007_Epitope_Rep5 997.55564414149 997.55454993586 24.878 2 -0.9862318386583349 0.297518770688124 1.0 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 30532 16667 GAIKSSFAP True PC9_epitope_Rep6 876.4705175351999 876.46942993586 76.579 2 -0.9862977280678236 0.297518770688124 1.0 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6'] 20420 16730 EPPALALA True PC9_epitope_Rep2 780.43815477776 780.43704993586 69.599 2 -0.9863147112294991 0.29755513394959565 1.0 ['ENST00000296666.12_1_5:126889918-126890026:+|nuORF'] 111677 15146 TLPIFLWMWLP True H1975_Epitope_Rep1 1415.7675514840298 1415.76644993586 63.517 2 -0.9863401850383863 0.2975605818005678 1.0 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|106|3|anti-sense'] 59664 6908 LGSTLTLLETC True H1975_Epitope_Rep1 1149.59512599497 1149.5940299358601 31.613 2 -0.9863455853700889 0.2975605818005678 1.0 ['ENST00000220562.8_1_8:28573409-28573490:+|nuORF'] 43815 20287 IKPKIQRPNTT True H1975_Epitope_Rep2 1294.7721192704996 1294.77046490379 84.07 3 -0.9863666192665081 0.2975660293583413 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 36152 17862 GVFEGVLQ True PC9_epitope_Rep3 847.4439684341899 847.44286993586 73.905 2 -0.9864031992280137 0.2975660293583413 1.0 ['ENSG00000178997|ENST00000458580|EXD1'] 90729 24589 RKPRNGIVV True PC9_epitope_Rep4 1037.6457965585698 1037.64468993586 103.07 2 -0.9864635134286 0.2976023895376998 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 45285 11674 ISAFRFVFQML True PC9_epitope_Rep6 1357.7216639207697 1357.72056993586 56.033 2 -0.9866091517626016 0.2977114642054704 1.0 ['SLC35G1|p.C105F|2|0.11|ENSG00000176273|chr10:93898706-93898706|G/T|missense_variant'] 34872 8477 GQVKFVLGP True NCI_RA007_Epitope_Rep2 943.5491022090698 943.54800993586 37.618 2 -0.986611358432796 0.2977114642054704 1.0 ['FRS3|p.P327Hfs*64|1|0.27|ENSG00000137218|chr6:41771118-41771118|G/-|frameshift_variant', 'ENSG00000137218|ENST00000373018|FRS3'] 58928 5491 LFVNQVCWSLD True H1975_Epitope_Rep3 1322.6329084860197 1322.63180993586 26.174 2 -0.9866308175554821 0.2977114642054704 1.0 ['chr8:136531006-136536978|137|13.26|0.67|4.31|+|0|LINC02055,LINC02055|2'] 63621 16727 LPLWLLWDSF True PC9_epitope_Rep5 1288.6855956818802 1288.68394490379 69.347 3 -0.9866652082936302 0.2977209127112259 1.0 ['ENST00000271375.6_1_1:168213838-168214108:+|nuORF'] 30866 11218 GARGGDRR True H1975_Epitope_Rep1 843.4423457247499 843.44179496793 48.121 1 -0.9867831889619504 0.29775726836093586 1.0 ['ENST00000040877.1_1_1:234614313-234614457:-|nuORF'] 6898 6731 AQIRDYQRI True NCI_RA007_Epitope_Rep5 1161.6254550368099 1161.62380490379 32.563 3 -0.9868087044349173 0.2977627100402255 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'KIAA0247-FARP1|1|fusion'] 82480 11220 PVEAADFGERL True PC9_epitope_Rep4 1202.59315184902 1202.5920499358601 50.933 2 -0.9868313912078378 0.2977627100402255 1.0 ['ENSG00000132825|ENST00000370996|PPP1R3D'] 133633 24515 WKKKKKKKK True H1975_Epitope_Rep2 1228.8495817455598 1228.84848993586 100.85 2 -0.9868558199660057 0.29777215734811385 1.0 ['ENST00000433510.2_1_17:46713876-46724046:-|nuORF'] 72539 8230 MVEDSKTL True PC9_epitope_Rep4 921.44773348529 921.44662993586 39.118 2 -0.9869695086330142 0.29780851035206435 1.0 ['ENSG00000136824|ENST00000374793|SMC2', 'nc|ENSG00000136824|O95347-2|SMC2'] 15824 24579 EDKKQKKK True PC9_epitope_Rep2 1030.6134933707797 1030.6123899358602 100.17 2 -0.9870506927280169 0.2978328423261633 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5'] 64409 14539 LQRLLLDAR True PC9_epitope_Rep3 1096.6716769532397 1096.6705699358602 61.046 2 -0.9870557225982406 0.2978328423261633 1.0 ['ENSG00000171219|ENST00000342711|CDC42BPG'] 7721 11919 ASRRPRARPPS True H1975_Epitope_Rep1 1249.7115847026098 1249.71048993586 50.848 2 -0.9870591992036257 0.2978328423261633 1.0 ['ENSG00000142347|ENST00000644032|MYO1F'] 33257 10116 GLALLWYDWLP True NCI_RA007_Epitope_Rep1 1345.7070594024499 1345.7059699358601 43.359 2 -0.9870714197427413 0.2978328423261633 1.0 ['ENST00000555918.1_1_14:36295434-36295554:-|nuORF'] 120736 7204 VGAVAGIVTGV True PC9_epitope_Rep4 941.55458151233 941.55348993586 35.014 2 -0.9871480987053367 0.29786518516525645 1.0 ['ENSG00000105352|ENST00000221954|CEACAM4', 'nc|ENSG00000170956|P40198-3|CEACAM3', 'ENST00000415495.5_1_19:42311603-42315272:+|nuORF', 'ENSG00000170956|ENST00000357396|CEACAM3'] 22124 8016 ESYKDRRRRAH True NCI_RA007_Epitope_Rep5 1472.77089048388 1472.76925490379 37.524 3 -0.9871808671916846 0.29786518516525645 1.0 ['nc|ENSG00000108788|Q9UH92-2|MLX', 'ENSG00000108788|ENST00000435881|MLX', 'nc|ENSG00000108788|Q9UH92|MLX', 'ENST00000585403.5_1_17:40719142-40721608:+|nuORF', 'ENST00000588320.1_1_17:40720799-40723580:+|nuORF', 'ENST00000590050.5_1_17:40719112-40721521:+|nuORF'] 75395 5893 NQENHLSRR True NCI_RA007_Epitope_Rep1 1152.57481644628 1152.57370993586 26.973 2 -0.9872024849770706 0.2978895121262257 1.0 ['ZNF624|p.Q188R|2|0.14|ENSG00000197566|chr17:16624323-16624323|T/C|missense_variant'] 68486 12006 LTVGGIPFHEK True NCI_RA007_Epitope_Rep1 1196.65535818276 1196.6542699358602 50.688 2 -0.9872083259600717 0.2978895121262257 1.0 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF', 'nc|ENSG00000183087|Q14393-5|GAS6', 'nc|ENSG00000183087|Q14393-4|GAS6', 'ENST00000610073.1_1_13:114523839-114538639:-|nuORF', 'nc|ENSG00000183087|Q14393-3|GAS6', 'ENSG00000183087|ENST00000327773|GAS6', 'nc|ENSG00000183087|Q14393-1|GAS6'] 7684 10949 ASPGVGHHTV True NCI_RA007_Epitope_Rep5 960.47772817396 960.47662993586 48.753 2 -0.9872195399323371 0.2978895121262257 1.0 ['ENST00000567004.1_1_16:22086865-22087021:+|nuORF', 'ENST00000569656.5_1_16:22086865-22095033:+|nuORF', 'ENST00000542527.6_1_16:22086835-22092068:+|nuORF'] 117358 10805 VAASRTQVQK True PC9_epitope_Rep1 1086.6145559999397 1086.6134499358602 46.448 2 -0.9872417757866782 0.2978895121262257 1.0 ['ENSG00000161036|ENST00000292616|LRWD1', 'ENST00000473880.5_1_7:102106264-102108393:+|nuORF'] 259 4805 AAGNSGCF True NCI_RA007_Epitope_Rep2 725.28027423737 725.2797249679301 23.317 1 -0.9872824088220117 0.29791240718820616 1.0 ['ENST00000301633.8_1_17:76219650-76219956:+|nuORF'] 99381 15062 SLDYYNTCEYP True PC9_epitope_Rep5 1366.53873331766 1366.5376299358602 62.943 2 -0.9872882231122508 0.29792185083058714 1.0 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 122897 15341 VGVRRRGNVRT True NCI_RA007_Epitope_Rep3 1268.7537838677597 1268.7526899358602 67.895 2 -0.9873096177418966 0.29793129421892234 1.0 ['ENSG00000101265|ENST00000379400|RASSF2', 'nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 127976 17407 VRPRPGTG True NCI_RA007_Epitope_Rep3 838.47733425114 838.47622993586 76.374 2 -0.9873368314498859 0.2979407373532221 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000505521.1_1_5:177019227-177019656:+|nuORF'] 139611 18084 YTRKWRRRRR True NCI_RA007_Epitope_Rep2 1532.9025137901197 1532.90140993586 75.096 2 -0.9873610995589454 0.29794216543375923 1.0 ['ENST00000306085.10_3_7:100730337-100730388:+|nuORF'] 22636 15299 ETRDLVRL True NCI_RA007_Epitope_Rep5 1000.5665431783599 1000.56544993586 65.544 2 -0.9873710767985675 0.29794216543375923 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 63129 11791 LNQAMQQEV True PC9_epitope_Rep2 1059.50189431647 1059.5007899358602 50.686 2 -0.9873896791494228 0.29794216543375923 1.0 ['ENST00000326019.10_1_2:27886341-27886545:+|nuORF'] 120645 17660 VGAKVVTP True PC9_epitope_Rep5 769.46978925921 769.4692449679301 72.942 1 -0.9874038656015136 0.2979650576320426 1.0 ['SAFB2|p.N441Pfs*36|2|0.35|ENSG00000130254|chr19:5604909-5604912|CGTT/-|frameshift_variant'] 65975 19816 LSLRTRRLFP True PC9_epitope_Rep2 1257.7669743204099 1257.76586993586 81.612 2 -0.9874992598758587 0.2979744996772111 1.0 ['ENST00000468783.1_1_10:98416607-98460586:-|nuORF'] 19123 13473 ELILEYTLCYK True H1975_Epitope_Rep1 1386.7104901003802 1386.7093899358601 56.94 2 -0.9875640237345247 0.2979799338300562 1.0 ['ENST00000462785.1_1_2:112526870-112536431:-|nuORF'] 139003 14468 YSGGGSGC True NCI_RA007_Epitope_Rep5 686.2329896917801 686.2324449679301 62.332 1 -0.9875805689578873 0.2979799338300562 1.0 ['ENSG00000203782|ENST00000368742|LORICRIN'] 42748 23186 IFEIHLHWP True PC9_epitope_Rep4 1190.62366413166 1190.62201490379 97.413 3 -0.9876746696203521 0.29799480882768264 1.0 ['ENSG00000053328|ENST00000338882|METTL24'] 115400 15320 TVETWCWRWDP True H1975_Epitope_Rep2 1477.6448701520496 1477.64376993586 64.086 2 -0.9877097056670618 0.29799480882768264 1.0 ['ENST00000533108.1_1_8:145164641-145165891:+|nuORF'] 118194 8105 VAVVKKGG True NCI_RA007_Epitope_Rep4 756.4857736765198 756.48466993586 37.963 2 -0.9877097520776644 0.29799480882768264 1.0 ['nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 72562 10023 MVKLETNNFK True H1975_Epitope_Rep1 1222.6379938664602 1222.6368899358602 43.491 2 -0.9877545736945572 0.29800024206888204 1.0 ['ENST00000517523.1_1_8:97243199-97243244:-|nuORF'] 123636 14226 VILLSPHRY True H1975_Epitope_Rep1 1096.6393141958001 1096.63820993586 59.899 2 -0.9877578215167622 0.29800024206888204 1.0 ['ENST00000517778.5_1_19:48737137-48744277:-|nuORF'] 11080 11588 DEAAARLLTVP True H1975_Epitope_Rep1 1154.62953735774 1154.62844993586 49.56 2 -0.9877767179951618 0.2980365788058096 1.0 ['ENSG00000130313|ENST00000252603|PGLS'] 57909 6540 LEQKVELAQ True H1975_Epitope_Rep3 1056.5815245361598 1056.5804299358601 30.124 2 -0.9878374098361854 0.298042010704392 1.0 ['ENSG00000100941|ENST00000216832|PNN', 'ENST00000557680.1_1_14:39648378-39651535:+|nuORF'] 67062 7244 LTATVGDTAIS True H1975_Epitope_Rep1 1047.54480467427 1047.54370993586 32.874 2 -0.98785193400009 0.298042010704392 1.0 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 48671 18916 KELEPQLTILY True H1975_Epitope_Rep1 1345.74931813725 1345.74822993586 78.874 2 -0.9880361039722464 0.29808519793459554 1.0 ['ENST00000434942.1_1_22:32664397-32665363:+|nuORF'] 79684 17753 PHLILELL True PC9_epitope_Rep4 946.58515336462 946.58404993586 76.31 2 -0.9880578634093115 0.29808519793459554 1.0 ['nc|ENSG00000116833|O00482-4|NR5A2', 'nc|ENSG00000116833|O00482-2|NR5A2', 'ENSG00000116833|ENST00000367362|NR5A2'] 24876 444 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 2.3709 2 -0.9880730776685968 0.29808519793459554 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 40569 9544 HSSYQWEL True PC9_epitope_Rep5 1048.46140940348 1048.46030993586 41.668 2 -0.988090162824474 0.29808519793459554 1.0 ['ENSG00000149635|ENST00000279028|OCSTAMP'] 115629 22616 TVISLLAEK True PC9_epitope_Rep3 972.5855472874399 972.58499496793 92.26 1 -0.9881000637009588 0.29808519793459554 1.0 ['ENST00000359154.6_1_16:69973895-69974054:+|nuORF'] 29113 19226 FTRRQCKP True PC9_epitope_Rep3 1034.5443682651396 1034.54326993586 79.173 2 -0.9881045870416678 0.29808519793459554 1.0 ['ENSG00000137815|ENST00000389629|RTF1', 'ENST00000558117.1_1_15:41769416-41770886:+|nuORF', 'NUSAP1-RTF1|1|fusion'] 74264 10882 NIERPVRRRHS True NCI_RA007_Epitope_Rep1 1418.7967113088998 1418.79560993586 46.32 2 -0.9881189471435683 0.298094636205946 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF', 'KNL1|p.I434Nfs*2|1|0.1|ENSG00000137812|chr15:40621487-40621487|T/-|frameshift_variant'] 121309 12459 VGHMRMYKYRF True H1975_Epitope_Rep1 1486.7325800409797 1486.73148993586 52.961 2 -0.9881628752863932 0.2981309667876832 1.0 ['ENST00000272117.7_1_1:226820812-226820974:-|nuORF'] 140040 3314 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 16.811 3 -0.9882305075619773 0.298167296392411 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 58879 15854 LFSVWSVLP True PC9_epitope_Rep5 1046.58006798418 1046.5789699358602 65.973 2 -0.9883092491829902 0.2982036250201689 1.0 ['ENST00000558084.5_1_7:151927011-151927098:-|nuORF'] 63789 14546 LPSKDVKP True PC9_epitope_Rep1 882.5174677276199 882.51636993586 60.776 2 -0.9883764876680423 0.2982050420168067 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 121500 16701 VGKGIPSL True PC9_epitope_Rep4 769.46978925921 769.4692449679301 72.213 1 -0.9884110533941208 0.2982050420168067 1.0 ['ENST00000373095.5_1_9:130716150-130742615:-|nuORF'] 44087 23558 ILLRRSET True PC9_epitope_Rep3 986.58727862294 986.58618993586 95.898 2 -0.9884120660383083 0.2982050420168067 1.0 ['ENST00000371933.7_1_1:47184091-47184325:-|nuORF'] 56630 20568 LDYRTYTMR True PC9_epitope_Rep2 1217.58629264677 1217.5846349037902 84.55 3 -0.9884284996929604 0.29820645889913683 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4'] 82676 26069 PVMVLLLRC True PC9_epitope_Rep5 1042.6031290112198 1042.6020299358602 105.89 2 -0.9884384710964936 0.29820645889913683 1.0 ['INHA|p.L194M|1|0.1|ENSG00000123999|chr2:219575005-219575005|C/A|missense_variant'] 18218 14818 EIRPVDFKQRN True H1975_Epitope_Rep1 1400.7524464550797 1400.7513499358602 62.227 2 -0.9884408680529768 0.29820645889913683 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-2|ZZEF1', 'ENST00000572426.5_1_17:3937307-3974023:-|nuORF'] 36966 13018 GVRIQPMSER True PC9_epitope_Rep6 1171.6131761009499 1171.61152490379 61.654 3 -0.9885073582750159 0.2982441988653169 1.0 ['ENSG00000163637|ENST00000638394|PRICKLE2'] 39617 10311 HPLNYTILMRP True PC9_epitope_Rep2 1353.72272654993 1353.7210949037901 44.99 3 -0.9885189272147645 0.2982441988653169 1.0 ['ENSG00000280204|ENST00000641544|OR1S1', 'nc|ENSG00000280204|Q8NH92|OR1S1'] 81930 11444 PSPLPRKVP True PC9_epitope_Rep2 989.6022004110899 989.60110993586 49.34 2 -0.9885798027883279 0.2982441988653169 1.0 ['ENST00000321153.8_1_11:809678-809873:+|nuORF'] 57272 7865 LEGEEEEEE True PC9_epitope_Rep1 1091.41424399719 1091.41314993586 35.078 2 -0.9885963717872717 0.2982441988653169 1.0 ['ENSG00000177432|ENST00000323061|NAP1L5'] 124771 23725 VLKQKAKKRRR True H1975_Epitope_Rep2 1409.9419189906096 1409.94028490379 97.76 3 -0.9886419741963814 0.2982670771547262 1.0 ['nc|ENSG00000147180|Q9Y462|ZNF711', 'nc|ENSG00000147180|Q9Y462-2|ZNF711', 'ENSG00000147180|ENST00000674551|ZNF711'] 66152 10470 LSPDRGLPD True PC9_epitope_Rep1 968.4927095317598 968.49160993586 45.162 2 -0.9886626478064896 0.29827250117631243 1.0 ['nc|ENSG00000188803|Q6ZSJ9|SHISA6', 'nc|ENSG00000188803|Q6ZSJ9-2|SHISA6', 'ENSG00000188803|ENST00000441885|SHISA6'] 12579 6451 DLDPVSEDP True H1975_Epitope_Rep3 985.42402083525 985.42347496793 29.788 1 -0.9886647264387122 0.29827250117631243 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 119916 7667 VEWRLKTK True PC9_epitope_Rep5 1058.6236641316598 1058.6225699358602 34.435 2 -0.9886690702127812 0.2982819347726723 1.0 ['nc|ENSG00000170100|Q96MU6|ZNF778'] 98564 19136 SILWLWLWL True NCI_RA007_Epitope_Rep4 1228.7008518231999 1228.70027496793 82.755 1 -0.9887518642663802 0.2982913681153965 1.0 ['ENST00000491383.5_1_2:86716620-86718467:+|nuORF'] 57434 6906 LEIMDWWPWYR True NCI_RA007_Epitope_Rep2 1593.74385591733 1593.74274993586 31.481 2 -0.9887792366200282 0.2983142442329408 1.0 ['ENST00000435844.3_2_20:18550009-18550057:+|nuORF'] 91386 6530 RMWKRQQQKWE True H1975_Epitope_Rep1 1602.8201491754196 1602.8190499358602 30.175 2 -0.9888302913338913 0.2983236768877119 1.0 ['nc|ENSG00000150687|O95084-2|PRSS23', 'ENSG00000150687|ENST00000280258|PRSS23'] 7503 5823 ASEGMRFVDF True PC9_epitope_Rep1 1157.51754438061 1157.51590490379 27.213 3 -0.9888718720039329 0.29835598392278634 1.0 ['ENSG00000141337|ENST00000621439|ARSG'] 43962 3957 ILFRYFNKVVN True H1975_Epitope_Rep1 1411.79760574235 1411.79596490379 19.976 3 -0.9888889506778892 0.29835598392278634 1.0 ['nc|ENSG00000165115|Q86VH2-3|KIF27', 'nc|ENSG00000165115|Q86VH2-2|KIF27', 'ENSG00000165115|ENST00000297814|KIF27', 'ENST00000422653.1_1_9:88385240-88401019:+|nuORF'] 110265 11814 TIFNRVDI True PC9_epitope_Rep6 976.5341804209198 976.53308993586 56.638 2 -0.9889074938304083 0.2983614049708978 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant'] 135378 16386 YDIWHRRHDYW True NCI_RA007_Epitope_Rep1 1645.75384343741 1645.75274993586 67.852 2 -0.9889345680311997 0.2983614049708978 1.0 ['ENSG00000116254|ENST00000262450|CHD5'] 9240 18418 AVQLCQSALRI True PC9_epitope_Rep1 1200.66487732064 1200.66322490379 75.635 3 -0.9889795025238989 0.2983856875949299 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 112214 15052 TLWGRRTAIP True PC9_epitope_Rep1 1169.66692592597 1169.66582993586 62.715 2 -0.9889880156745332 0.2983856875949299 1.0 ['ENST00000463515.1_1_10:103338648-103338876:-|nuORF'] 55382 7328 LASRGPLAA True PC9_epitope_Rep4 854.4974009893799 854.49630993586 35.515 2 -0.9890015568887323 0.2983856875949299 1.0 ['ENST00000482648.5_1_9:135973742-135973952:-|nuORF'] 57157 9050 LEERQRFQEER True H1975_Epitope_Rep3 1518.75390300706 1518.7528099358601 39.799 2 -0.9890278295477709 0.2983856875949299 1.0 ['nc|ENSG00000137497|Q14980-2|NUMA1', 'ENSG00000137497|ENST00000393695|NUMA1', 'nc|ENSG00000137497|Q14980-4|NUMA1', 'nc|ENSG00000137497|Q14980-3|NUMA1'] 67006 11311 LTAIPFWYHM True PC9_epitope_Rep3 1277.62670090677 1277.6256099358602 48.515 2 -0.9890888708002874 0.29840855936987554 1.0 ['EXT2-PRMT10|2|fusion', 'EXT2-PRMT10|1|fusion', 'nc|ENSG00000164169|Q6P2P2-2|PRMT9', 'ENSG00000164169|ENST00000322396|PRMT9'] 31104 7488 GCCCCWESS True NCI_RA007_Epitope_Rep3 976.25473038948 976.25362993586 36.576 2 -0.9892105451377415 0.2984248158701145 1.0 ['ENST00000486434.1_1_6:29573344-29574170:-|nuORF', 'ENST00000355973.7_1_6:29572734-29574170:-|nuORF'] 10961 7444 DCDWRWDP True PC9_epitope_Rep1 1091.4130793120698 1091.4119899358602 33.449 2 -0.9892243484070125 0.2984248158701145 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 116296 20146 TVVSLKNTTKS True PC9_epitope_Rep6 1176.67140216972 1176.6703099358601 90.164 2 -0.9892260414847412 0.2984248158701145 1.0 ['ADGRE1|p.E378K|1|0.05|ENSG00000174837|chr19:6913662-6913662|G/A|missense_variant'] 15407 4182 EALVTDLHT True PC9_epitope_Rep6 997.50802524273 997.50692993586 23.034 2 -0.9892305689314069 0.2984248158701145 1.0 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292', 'ZNF292|p.S1288Pfs*23|1|0.24|ENSG00000188994|chr6:87257486-87257486|T/-|frameshift_variant'] 93010 14546 RRREEEERRKQ True H1975_Epitope_Rep1 1570.8400326728595 1570.83892993586 61.156 2 -0.9892433596716887 0.2984248158701145 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 93305 20341 RRRYLRRKER True NCI_RA007_Epitope_Rep4 1487.9021794369498 1487.90108993586 88.064 2 -0.9892574511090211 0.2984248158701145 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 80458 17906 PLKVKDIP True PC9_epitope_Rep2 908.5695033004798 908.56840993586 74.179 2 -0.9892630548106193 0.29843023412090425 1.0 ['nc|ENSG00000109680|Q8N5T2-2|TBC1D19', 'ENSG00000109680|ENST00000264866|TBC1D19', 'ENST00000502873.5_1_4:26585743-26755545:+|nuORF'] 28157 21405 FRLRRMLFP True H1975_Epitope_Rep2 1234.7121022965798 1234.7110099358601 88.566 2 -0.9892663276355255 0.29843023412090425 1.0 ['ENST00000537087.5_1_12:7053133-7053220:+|nuORF'] 32204 17384 GFGFGAGG True H1975_Epitope_Rep2 668.2918248972398 668.29127496793 72.161 1 -0.9892796181599737 0.29843565208042144 1.0 122457 9424 VGSLTLHDP True PC9_epitope_Rep4 937.48689587533 937.48578993586 43.86 2 -0.9892986825198631 0.29843565208042144 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 37336 19331 GVVWMGVF True PC9_epitope_Rep5 893.4469456396498 893.44584993586 79.401 2 -0.989389489066848 0.29849883750621564 1.0 ['OR4C46|p.G150V|1|0.29|ENSG00000185926|chr11:54603550-54603550|C/A|missense_variant'] 29882 18552 FVYGEPREL True PC9_epitope_Rep5 1108.5553097883198 1108.5542099358602 76.383 2 -0.9894238838950798 0.2985217040720333 1.0 ['ENSG00000046774|ENST00000247452|MAGEC2'] 139721 5341 YTWRWVWSWEW True H1975_Epitope_Rep1 1683.7622828627896 1683.76063490379 25.607 3 -0.9895631747567009 0.298571447769819 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 116153 13283 TVTEITLI True PC9_epitope_Rep2 888.5167990212799 888.51570993586 56.369 2 -0.9896269414308136 0.2986199760813771 1.0 ['OR6M1|p.D119*|1|0.27|ENSG00000196099|chr11:123805995-123805996|-/A|frameshift_variant', 'OR6M1|p.C238Lfs*31|1|0.17|ENSG00000196099|chr11:123805637-123805638|-/A|frameshift_variant', 'ENSG00000196099|ENST00000309154|OR6M1'] 3585 15079 AGPGFPQAVP True PC9_epitope_Rep3 939.4814165720697 939.48030993586 63.137 2 -0.9896272169236475 0.2986199760813771 1.0 ['ENSG00000106351|ENST00000300176|AGFG2'] 62347 3406 LLRLALLALKV True PC9_epitope_Rep5 1221.85366406649 1221.85201490379 18.17 3 -0.9896367627874708 0.2986199760813771 1.0 ['ENSG00000198677|ENST00000358746|SKIC3'] 133886 6867 WMWWRRNRRGK True H1975_Epitope_Rep1 1630.8527867163796 1630.85113490379 31.458 3 -0.9896645577825771 0.2986199760813771 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3', 'ESYT3-RPN1|1|fusion'] 76679 11171 NTLERREKHEK True NCI_RA007_Epitope_Rep2 1438.7640737679396 1438.7629699358602 48.033 2 -0.9896931135075496 0.2986199760813771 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 25044 26929 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 110.04 2 -0.989700910651503 0.2986199760813771 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 47063 9643 IVTQVGPGP True NCI_RA007_Epitope_Rep2 866.4861675993399 866.48506993586 42.125 2 -0.9897060856321805 0.2986199760813771 1.0 ['ENST00000565149.5_1_16:88718935-88722722:-|nuORF', 'ENSG00000167508|ENST00000301012|MVD', 'ENST00000562981.1_1_16:88718935-88719839:-|nuORF', 'ENST00000561895.1_1_16:88718935-88721317:-|nuORF'] 618 9645 AASQWISRAP True PC9_epitope_Rep2 1085.56179215109 1085.5606899358602 42.44 2 -0.989708509290697 0.2986199760813771 1.0 ['ENST00000508056.5_2_5:175600468-175603287:-|nuORF'] 81548 6718 PRDFDLEEVMK True H1975_Epitope_Rep1 1377.6598515098501 1377.6587499358602 30.884 2 -0.9897812497510474 0.2986348122866894 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 84172 14422 QESEEEKQP True PC9_epitope_Rep5 1102.4778473132599 1102.4767499358602 60.473 2 -0.9898131222343743 0.2986348122866894 1.0 ['ENSG00000135842|ENST00000367511|NIBAN1'] 9321 15003 AVSLLVGG True NCI_RA007_Epitope_Rep2 714.42759009406 714.4270449679301 63.042 1 -0.9898234786219692 0.2986348122866894 1.0 ['ENSG00000100263|ENST00000216085|RHBDD3'] 134620 6013 WWFRWRLDRYV True NCI_RA007_Epitope_Rep1 1681.8629999635698 1681.86081987172 27.435 4 -0.9898393492050401 0.29863621095062143 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 60466 18562 LILLLLLIKAA True PC9_epitope_Rep1 1192.85226708416 1192.85116993586 76.186 2 -0.9898516953445907 0.29863621095062143 1.0 ['nc|ENSG00000162365|Q5TCH4-2|CYP4A22', 'ENSG00000162365|ENST00000371891|CYP4A22'] 3509 9387 AGLQRHWRAQL True PC9_epitope_Rep4 1334.73198579402 1334.7308899358602 43.715 2 -0.9898561278690369 0.29863621095062143 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2', 'ENST00000487091.1_1_7:73790414-73795297:+|nuORF'] 62713 7826 LLYDANIEAK True NCI_RA007_Epitope_Rep2 1148.607739284 1148.60664993586 35.07 2 -0.9898693805345902 0.2986456345900626 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26'] 73500 10134 NFDVGKVQ True H1975_Epitope_Rep3 905.4606811274898 905.45958993586 44.025 2 -0.989912332834816 0.29865104530553016 1.0 ['ENSG00000016602|ENST00000370563|CLCA4'] 24825 12661 FDAAVDFHRLI True H1975_Epitope_Rep3 1302.67207087606 1302.67096993586 53.909 2 -0.9899191824874418 0.29865104530553016 1.0 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1', 'ENST00000557893.5_1_15:45440187-45444854:+|nuORF'] 44729 13975 IPQREKTV True PC9_epitope_Rep1 969.5607295219299 969.55962993586 58.593 2 -0.989938154055232 0.29866046836582516 1.0 ['ENST00000475200.5_1_10:103113883-103221786:+|nuORF'] 5828 4093 APGARATPVA True PC9_epitope_Rep4 909.5032146458099 909.50210993586 22.041 2 -0.9899762393459021 0.29866989117291415 1.0 ['ENST00000471850.1_1_3:119298548-119305161:+|nuORF', 'ENST00000357003.7_1_3:119298548-119299463:+|nuORF', 'ENST00000478399.5_1_3:119298548-119298770:+|nuORF', 'ENST00000481816.5_3_3:119298332-119299463:+|nuORF'] 134013 8109 WPTTFSQEV True PC9_epitope_Rep4 1093.50802524273 1093.5069299358602 38.645 2 -0.9900097570740184 0.2986793137268074 1.0 ['ENSG00000166446|ENST00000570137|CDYL2'] 84215 19751 QETTWRIDTV True PC9_epitope_Rep5 1247.61461556959 1247.61350993586 81.017 2 -0.990047872640472 0.29870217110920033 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 121659 17933 VGLIHMLTHL True PC9_epitope_Rep3 1132.64268532408 1132.64104490379 74.183 3 -0.9901367130951328 0.29875189767979254 1.0 ['ENST00000524832.5_1_11:882499-902261:-|nuORF', 'ENSG00000177830|ENST00000323578|CHID1', 'nc|ENSG00000177830|Q9BWS9-2|CHID1', 'ENST00000526714.5_1_11:870485-904855:-|nuORF'] 44278 6689 ILVPHHCPAP True NCI_RA007_Epitope_Rep1 1082.5695203838202 1082.5684299358602 30.029 2 -0.9901675301336962 0.29878417411164104 1.0 ['ENST00000285599.7_1_4:6612904-6619128:+|nuORF'] 53493 27593 KVLEKYWLYKI True PC9_epitope_Rep1 1481.86462267301 1481.86297490379 113.03 3 -0.9901698761118464 0.29878417411164104 1.0 ['ENST00000512116.5_1_4:123818829-123833766:-|nuORF', 'ENST00000503370.5_1_4:123814355-123833769:-|nuORF'] 42704 7410 IEYEHRAP True H1975_Epitope_Rep3 1013.49304388493 1013.49194993586 33.48 2 -0.9901997264711824 0.29879359449728626 1.0 ['ENSG00000168769|ENST00000380013|TET2'] 25041 306 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 1.7022 2 -0.9902569634181502 0.29879900051049196 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 23062 6369 EVLCDVHFLV True NCI_RA007_Epitope_Rep2 1172.58998104488 1172.5888899358602 29.381 2 -0.9902856677992464 0.29879900051049196 1.0 ['ENSG00000133243|ENST00000255608|BTBD2'] 14975 16694 DYSSGLYHP True PC9_epitope_Rep2 1037.44542498617 1037.4443299358602 69.461 2 -0.9903392671696365 0.2988138257143241 1.0 ['GATA2|p.F265Y|1|0.14|ENSG00000179348|chr3:128485804-128485804|A/T|missense_variant'] 118398 9031 VDLHVISNDVC True NCI_RA007_Epitope_Rep2 1212.58087291316 1212.5797699358602 39.728 2 -0.9903695061604629 0.2988138257143241 1.0 ['nc|ENSG00000142515|P07288-3|KLK3', 'nc|ENSG00000142515|P07288-5|KLK3', 'nc|ENSG00000142515|P07288-2|KLK3', 'ENSG00000142515|ENST00000326003|KLK3'] 123829 9791 VIVKPMPGK True H1975_Epitope_Rep1 967.5888588460698 967.58776993586 42.588 2 -0.9904077684299039 0.2988138257143241 1.0 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'nc|ENSG00000154305|Q5JRA6-4|MIA3'] 66577 7141 LSSNFLRHVP True NCI_RA007_Epitope_Rep5 1168.6352914445201 1168.6341899358601 34.144 2 -0.9904526449157439 0.2988152168072645 1.0 ['ENSG00000174348|ENST00000312553|PODN', 'nc|ENSG00000174348|Q7Z5L7-2|PODN', 'nc|ENSG00000174348|Q7Z5L7-3|PODN'] 124466 4034 VLEYDWRNY True NCI_RA007_Epitope_Rep5 1256.5825871653199 1256.5814899358602 21.94 2 -0.9904640724458408 0.2988152168072645 1.0 ['chr3:58831889-58842147|288|17.03|0.08|7.65|-|0|CFAP20DC,None|1'] 16033 9803 EEAFSRKTELI True NCI_RA007_Epitope_Rep1 1321.68778050985 1321.6866899358602 42.133 2 -0.9904764007970573 0.2988152168072645 1.0 ['ZNF300|p.C526Wfs*27|1|0.17|ENSG00000145908|chr5:150895660-150895661|CA/-|frameshift_variant', 'nc|ENSG00000145908|Q96RE9-4|ZNF300', 'ENSG00000145908|ENST00000274599|ZNF300', 'nc|ENSG00000145908|Q96RE9-2|ZNF300', 'nc|ENSG00000145908|Q96RE9-3|ZNF300'] 93281 19154 RRRVYRRRR True NCI_RA007_Epitope_Rep3 1372.8500842944397 1372.8489899358601 83.645 2 -0.9905032514951612 0.2988246356370475 1.0 ['ENST00000469908.5_2_16:2390982-2391318:+|nuORF'] 34756 22454 GQRLPVEDFSL True PC9_epitope_Rep3 1259.6510010783097 1259.64990993586 91.646 2 -0.9905788454074331 0.2988609193240738 1.0 ['nc|ENSG00000107147|Q5JUK3|KCNT1'] 137378 8873 YLKLRNWQWWR True NCI_RA007_Epitope_Rep2 1647.87865002771 1647.87754993586 39.158 2 -0.9906836687262242 0.29887033728692897 1.0 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'ENST00000473022.1_1_22:36698592-36700051:-|nuORF', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 13977 12311 DRPRDWYRRMF True NCI_RA007_Epitope_Rep1 1596.7731989829997 1596.77210993586 51.858 2 -0.9907355724335621 0.29887975499677627 1.0 ['ENST00000523402.5_1_8:22411983-22419017:+|nuORF', 'ENST00000517535.5_1_8:22411983-22423386:+|nuORF', 'ENSG00000120896|ENST00000240123|SORBS3'] 72791 6025 NAGDMIEMQGF True NCI_RA007_Epitope_Rep4 1211.49509468387 1211.49398993586 29.793 2 -0.990859196856422 0.2989966285645207 1.0 ['nc|ENSG00000141258|O43147-5|SGSM2', 'nc|ENSG00000141258|O43147|SGSM2', 'ENST00000574857.1_1_17:2268210-2275697:+|nuORF'] 49581 10510 KKKKHKHR True NCI_RA007_Epitope_Rep2 1088.7043144942 1088.70320993586 45.477 2 -0.9908756524534643 0.29902889148567513 1.0 ['ENSG00000112739|ENST00000337659|PRPF4B'] 8925 10720 AVGLGVRFIK True NCI_RA007_Epitope_Rep1 1058.66004964038 1058.6589499358602 45.691 2 -0.9908798519663408 0.29902889148567513 1.0 ['ENSG00000188316|ENST00000341276|ENO4', 'nc|ENSG00000188316|A6NNW6-2|ENO4', 'nc|ENSG00000188316|A6NNW6-4|ENO4'] 76675 10794 NTLERREKHEK True H1975_Epitope_Rep1 1438.7640737679396 1438.7629699358602 46.482 2 -0.9908990292982216 0.29903830655993124 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 39304 13065 HLQSVTAYALM True PC9_epitope_Rep5 1232.62234380232 1232.62069490379 55.26 3 -0.9909143789183149 0.2990437048378865 1.0 ['ENST00000355439.6_1_1:1656764-1666265:-|nuORF', 'ENST00000480991.1_1_1:1597223-1601267:-|nuORF', 'ENSG00000189339|ENST00000617444|SLC35E2B'] 33780 17224 GLSRGGKMRL True PC9_epitope_Rep3 1073.61278217813 1073.61168993586 71.405 2 -0.990961498131835 0.2990437048378865 1.0 ['ENST00000355068.4_1_17:7210662-7213200:+|nuORF'] 30152 4029 FYRRFLCFER True PC9_epitope_Rep3 1435.7183098758298 1435.7166749037901 20.614 3 -0.9909991299346492 0.29904508642572225 1.0 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 80617 10362 PLPIIWLK True NCI_RA007_Epitope_Rep3 978.6266242537799 978.62552993586 47.822 2 -0.9910228233464218 0.29904508642572225 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 90038 8359 RGGGSHPA True NCI_RA007_Epitope_Rep4 737.3568847652899 737.35633496793 38.966 1 -0.9910263664820694 0.29904508642572225 1.0 ['ENST00000314728.9_1_17:19239740-19240025:+|nuORF'] 14589 10303 DVHHSDVP True NCI_RA007_Epitope_Rep1 904.40389452736 904.40278993586 44.073 2 -0.9910472041747749 0.29905450052378524 1.0 ['nc|ENSG00000197558|A2VEC9|SSPOP', 'ENST00000475488.3_1_7:149493482-149494663:+|nuORF'] 139408 16687 YTEEEWERE True PC9_epitope_Rep5 1269.51496109797 1269.51331490379 69.191 3 -0.9910860722068358 0.2990558816024496 1.0 ['ENSG00000169918|ENST00000307050|OTUD7A'] 76151 19555 NRRVRLKNRFY True NCI_RA007_Epitope_Rep2 1520.88004701004 1520.8789499358602 81.004 2 -0.9910955552552014 0.2990558816024496 1.0 ['GPR37|p.P250R|1|0.5|ENSG00000170775|chr7:124764228-124764228|G/C|missense_variant'] 22554 4450 ETLREHKFMGF True NCI_RA007_Epitope_Rep2 1393.68125566077 1393.68014993586 21.943 2 -0.9911160517048936 0.2990558816024496 1.0 ['ENST00000311936.7_1_12:25362125-25362311:-|nuORF'] 139618 7741 YTRQERYRARP True NCI_RA007_Epitope_Rep5 1494.7803925384198 1494.77875490379 36.474 3 -0.9911644308792655 0.2990652950498241 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 108023 16356 TDEAWSRHCC True H1975_Epitope_Rep1 1206.45462685422 1206.4535299358602 68.272 2 -0.9912443787271357 0.29908813773283377 1.0 ['ENST00000370069.5_1_20:62220735-62220903:-|nuORF'] 133308 9194 WEQLKDDSL True NCI_RA007_Epitope_Rep4 1132.540053647 1132.53894993586 42.209 2 -0.9913092880942671 0.2991109798023206 1.0 ['ENSG00000109101|ENST00000579795|FOXN1'] 127977 18060 VRPRPGTG True NCI_RA007_Epitope_Rep5 838.47733425114 838.47622993586 76.265 2 -0.9913138251390967 0.29911637525850726 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000505521.1_1_5:177019227-177019656:+|nuORF'] 15848 8401 EDLLEWLRP True H1975_Epitope_Rep1 1169.60807363717 1169.6069699358602 37.242 2 -0.99132080394936 0.29911637525850726 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 121844 7966 VGNSSDFY True NCI_RA007_Epitope_Rep4 887.3661120363099 887.36500993586 37.394 2 -0.9913747107288217 0.2991392160285764 1.0 ['ENST00000503240.5_1_5:148743537-148748214:+|nuORF', 'ENSG00000145882|ENST00000274569|PCYOX1L', 'ENST00000505669.5_1_5:148737686-148748214:+|nuORF'] 38063 13196 HELVKHEE True PC9_epitope_Rep1 1019.5036085686299 1019.50250993586 55.622 2 -0.9915065748996894 0.29924262770586024 1.0 ['nc|ENSG00000033011|Q9BT22-2|ALG1', 'ENSG00000033011|ENST00000262374|ALG1', 'ENST00000450217.2_1_11:3427793-3430002:+|nuORF', 'ENST00000482834.1_1_3:155761946-155762456:-|nuORF', 'ENSG00000251287|ENST00000425059|ALG1L2'] 100355 16362 SLNEVKNLL True PC9_epitope_Rep3 1028.5866099165999 1028.58550993586 68.071 2 -0.99154848983424 0.29926546616712996 1.0 ['CMTR2|p.S551Ffs*2|1|0.14|ENSG00000180917|chr16:71284269-71284270|-/A|frameshift_variant', 'ENSG00000180917|ENST00000434935|CMTR2'] 78161 19184 PAPPNRSPKAP True PC9_epitope_Rep1 1130.61964138038 1130.61854993586 78.586 2 -0.9915742638334475 0.29927487578890827 1.0 ['ENST00000508652.5_1_4:164415907-164436651:+|nuORF'] 3264 15256 AGFGRRSYLV True PC9_epitope_Rep6 1124.60907669668 1124.6079699358602 70.79 2 -0.9916626202195845 0.2992896754528487 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 79331 23392 PGKREPLRSVL True PC9_epitope_Rep2 1250.7459045226599 1250.74480993586 95.452 2 -0.9916646386949443 0.2992896754528487 1.0 ['ENSG00000182170|ENST00000332314|MRGPRG'] 43419 15256 IHSLEQIP True PC9_epitope_Rep1 935.5076313199099 935.50652993586 63.502 2 -0.9916864963595117 0.2992896754528487 1.0 ['ENST00000395496.5_1_6:32136507-32136903:-|nuORF'] 586 10574 AARRGRQRPC True H1975_Epitope_Rep3 1169.6312262069298 1169.6301299358602 45.742 2 -0.9917333878735576 0.2993125117490668 1.0 ['ENST00000552576.2_1_12:56123998-56124220:+|nuORF'] 25895 21011 FGIVSTLSV True PC9_epitope_Rep2 921.51713337445 921.51602993586 86.273 2 -0.9917755392711055 0.2993219201074186 1.0 ['ENSG00000181619|ENST00000395116|GPR135'] 41699 19161 IDLIVVVASMV True H1975_Epitope_Rep2 1157.67298239285 1157.67188993586 79.53 2 -0.991822722682581 0.29933132821311564 1.0 ['ENSG00000053918|ENST00000155840|KCNQ1', 'nc|ENSG00000053918|P51787-2|KCNQ1'] 55062 4574 LALGSPRLVRR True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 22.623 3 -0.9919392527019536 0.29939444392228476 1.0 ['ENSG00000099822|ENST00000251287|HCN2'] 36622 23215 GVLLLWLRME True PC9_epitope_Rep3 1228.7002002001998 1228.69967496793 94.57 1 -0.9920003352771356 0.29941325742826835 1.0 ['AluSp_dup1142|chr1:32231212-32231509:+|1.346433214745646|0.2089834518128584|2.69|502.0|22|3|anti-sense'] 120151 4866 VFLCKLFPF True H1975_Epitope_Rep3 1112.60925993748 1112.6081699358601 23.843 2 -0.9920116037274762 0.29941325742826835 1.0 ['nc|ENSG00000151617|P25101-3|EDNRA', 'ENSG00000151617|ENST00000651419|EDNRA'] 133687 5609 WKYLFCMMTSF True H1975_Epitope_Rep2 1455.6389224665897 1455.63782993586 26.577 2 -0.9920724067216948 0.2994360902255639 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|106|2|anti-sense'] 27251 10563 FLWDMCNYLVP True PC9_epitope_Rep1 1399.63046595787 1399.62880490379 45.522 3 -0.9921718821291785 0.29945490185548185 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 43783 6093 IKDDSEDLKP True PC9_epitope_Rep2 1158.57683307854 1158.5757299358602 28.828 2 -0.9921785162686371 0.29945490185548185 1.0 ['ENST00000503672.1_1_1:2077474-2087532:+|nuORF', 'nc|ENSG00000067606|Q05513-2|PRKCZ', 'ENST00000479263.5_1_1:2075906-2116445:+|nuORF', 'nc|ENSG00000067606|Q05513-3|PRKCZ', 'ENSG00000067606|ENST00000378567|PRKCZ'] 106747 4914 SYDVSDSGQLE True NCI_RA007_Epitope_Rep2 1198.49897668066 1198.49786993586 23.734 2 -0.9921971884614292 0.29946430729159673 1.0 ['ENSG00000067057|ENST00000381125|PFKP', 'nc|ENSG00000067057|Q01813-2|PFKP'] 6214 5276 APRERARH True H1975_Epitope_Rep2 991.5423941191898 991.54128993586 25.357 2 -0.9922478932061394 0.29949654292810635 1.0 ['ENST00000371940.1_1_1:47081713-47081854:-|nuORF'] 90057 27418 RGHRAMHA True PC9_epitope_Rep5 934.4667866507799 934.46568993586 112.45 2 -0.992248294162561 0.29949654292810635 1.0 ['ENST00000256495.3_1_3:5021183-5021234:+|nuORF'] 111868 21650 TLRLRFPI True PC9_epitope_Rep1 1014.6338348925399 1014.63272993586 88.105 2 -0.9922809867604355 0.299519372768037 1.0 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 34405 13926 GPVPEPRQITI True PC9_epitope_Rep5 1205.6768219033297 1205.67572993586 58.587 2 -0.9923029586166229 0.299542201994979 1.0 ['nc|ENSG00000062038|P22223-2|CDH3', 'chr16:68695923-68698093|483|18.67|0.81|4.53|+|ENST00000429102|CDH3,CDH3', 'ENST00000542274.5_1_16:68679206-68732300:+|nuORF', 'ENSG00000062038|ENST00000264012|CDH3'] 107851 5295 TARKSQWK True NCI_RA007_Epitope_Rep3 1003.5563128478299 1003.55520993586 27.837 2 -0.9923301393763799 0.2995516056277521 1.0 ['ENSG00000140521|ENST00000268124|POLG'] 110658 13109 TIVRIPSAS True PC9_epitope_Rep2 942.5498304850599 942.54872993586 55.699 2 -0.9923870011728636 0.2995878586099961 1.0 ['ENSG00000255804|ENST00000540461|OR6J1'] 60573 18748 LIRHGEHF True PC9_epitope_Rep3 1007.5300980999899 1007.52900993586 77.335 2 -0.9924597752350889 0.29962949041507814 1.0 ['ENST00000361972.8_1_10:7423786-7423873:-|nuORF'] 22336 4809 ETEKLQKQLA True NCI_RA007_Epitope_Rep4 1186.6557521055797 1186.65409490379 24.933 3 -0.9924669008617566 0.29962949041507814 1.0 ['ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1'] 62062 14989 LLMLWFYAKIY True NCI_RA007_Epitope_Rep5 1459.79376623187 1459.7926699358602 64.325 2 -0.9924738454977854 0.29962949041507814 1.0 ['ENSG00000196639|ENST00000431010|HRH1'] 78880 8690 PETKECPPP True H1975_Epitope_Rep3 996.4586325221599 996.45752993586 38.425 2 -0.9925012821473248 0.29963486992240984 1.0 ['ENSG00000170190|ENST00000329783|SLC16A5', 'nc|ENSG00000170190|O15375-2|SLC16A5'] 122939 12055 VGVVRKYL True PC9_epitope_Rep1 932.5807366905199 932.5801849679301 51.228 1 -0.9925105061774037 0.29963486992240984 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 107852 25092 TARKSTGG True PC9_epitope_Rep1 776.4140652882398 776.41351496793 101.41 1 -0.9925137279085121 0.2996442714276126 1.0 ['ENSG00000132475|ENST00000254810|H3-3B', 'ENSG00000163041|ENST00000366815|H3-3A', 'ENSG00000188375|ENST00000340398|H3-5', 'H3C8|p.S29Afs*8|1|0.35|ENSG00000273983|chr6:26271304-26271304|C/-|frameshift_variant', 'H3-5|p.S29Afs*8|1|0.29|ENSG00000188375|chr12:31792082-31792082|T/-|frameshift_variant', 'H3-5|p.A16Pfs*21|1|0.14|ENSG00000188375|chr12:31792125-31792125|C/-|frameshift_variant', 'ENST00000586518.1_1_17:73775126-73775255:-|nuORF', 'ENSG00000203852|ENST00000403683|H3C15', 'ENSG00000203811|ENST00000369158|H3C14', 'ENSG00000183598|ENST00000331491|H3C13', 'ENSG00000278828|ENST00000685041|H3C10', 'ENSG00000277775|ENST00000618052|H3C7', 'ENSG00000275714|ENST00000613854|H3C1', 'ENSG00000275379|ENST00000616365|H3C11', 'ENSG00000274750|ENST00000614911|H3C6', 'ENSG00000273983|ENST00000614378|H3C8', 'ENSG00000197409|ENST00000356476|H3C4', 'ENSG00000197153|ENST00000359303|H3C12', 'ENSG00000168148|ENST00000366696|H3-4', 'nc|ENSG00000273213|Q5TEC6|H3-7'] 100949 7631 SLSQRTSQL True PC9_epitope_Rep4 1018.54072235334 1018.53962993586 36.732 2 -0.9925588347938878 0.29968051975945015 1.0 ['nc|ENSG00000123329|Q9BRR9-4|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9-3|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9-5|ARHGAP9', 'ENSG00000123329|ENST00000393791|ARHGAP9', 'nc|ENSG00000123329|Q9BRR9|ARHGAP9', 'ENST00000546200.5_1_12:57870467-57871594:-|nuORF'] 12578 6466 DLDPVSEDP True H1975_Epitope_Rep2 985.42402083525 985.42347496793 29.789 1 -0.9926426054488715 0.2997436138367988 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 24872 125 FDDGDCCD True NCI_RA007_Epitope_Rep1 888.226583982 888.22548993586 0.68536 2 -0.9927864397325603 0.2997798598620097 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 104350 20982 SSFCPPDD True NCI_RA007_Epitope_Rep1 866.3116339352998 866.31052993586 85.866 2 -0.9929246733855344 0.29978523489932885 1.0 ['ENSG00000161905|ENST00000293761|ALOX15', 'nc|ENSG00000161905|P16050-2|ALOX15', 'ALOX15|p.A448V|1|0.15|ENSG00000161905|chr17:4633221-4633221|G/A|missense_variant'] 114085 20598 TRRAAAAI True PC9_epitope_Rep6 828.4929843152798 828.49188993586 91.959 2 -0.9929282807385675 0.29978523489932885 1.0 ['chr1:1204486-1206385|116|17.83|0.05|8.49|-|0|TNFRSF18,TNFRSF18|1'] 138647 6741 YRRRHRKHSPQ True NCI_RA007_Epitope_Rep4 1519.8344937999498 1519.83229987172 32.55 4 -0.9929867501122238 0.29980805626770113 1.0 ['ENSG00000125266|ENST00000646441|EFNB2'] 125517 6369 VLVRTEDVAPA True H1975_Epitope_Rep1 1168.6451874218799 1168.6440899358602 29.56 2 -0.9930139282210974 0.29983087702343564 1.0 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG', 'nc|ENSG00000188162|Q6ZRI0-2|OTOG'] 37385 13392 GVYHCKATNQK True PC9_epitope_Rep4 1247.6080907205098 1247.6069899358602 59.414 2 -0.9931168341208116 0.29991275753305147 1.0 ['ENSG00000102755|ENST00000282397|FLT1', 'FLT1|p.C1110Afs*4|1|0.45|ENSG00000102755|chr13:28317556-28317556|A/-|frameshift_variant'] 131466 25471 VVTVGVITVL True PC9_epitope_Rep2 998.6375828603 998.63648993586 103.65 2 -0.9931311964056551 0.29991275753305147 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 114655 4733 TSQISLTGP True NCI_RA007_Epitope_Rep5 902.4709114580199 902.46980993586 24.89 2 -0.9931792275737348 0.29991275753305147 1.0 ['ENSG00000187045|ENST00000676104|TMPRSS6', 'nc|ENSG00000187045|Q8IU80|TMPRSS6', 'nc|ENSG00000187045|Q8IU80-5|TMPRSS6'] 82886 13174 PVWAGHGG True NCI_RA007_Epitope_Rep5 779.3714722002699 779.37036993586 57.35 2 -0.993232353722135 0.2999221539204896 1.0 ['ENSG00000214860|ENST00000399134|EVPLL', 'ENST00000564629.1_1_16:31469053-31469224:-|nuORF'] 130512 13551 VTVYNRVIL True PC9_epitope_Rep6 1075.6389798426299 1075.6378899358601 63.855 2 -0.9932367096638902 0.29992752456112093 1.0 ['SQOR|p.G384V|1|0.11|ENSG00000137767|chr15:45689073-45689073|G/T|missense_variant'] 131468 25326 VVTVGVITVL True PC9_epitope_Rep2 998.6375828603 998.63648993586 103.09 2 -0.9932483973283537 0.29992752456112093 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 4191 8922 AIDKYYRLIFP True NCI_RA007_Epitope_Rep5 1397.77072228817 1397.7696299358602 40.98 2 -0.9932685494488851 0.2999369203720356 1.0 ['GABRR2|p.S445Y|1|0.1|ENSG00000111886|chr6:89257734-89257734|G/T|missense_variant'] 130401 8666 VTVPPDVFFF True NCI_RA007_Epitope_Rep3 1166.60119735158 1166.60010993586 41.168 2 -0.9933044697011597 0.2999382649774533 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 129354 8383 VTEDVKIK True NCI_RA007_Epitope_Rep1 930.5385970950199 930.53750993586 36.61 2 -0.993342699359725 0.2999382649774533 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13'] 25046 27497 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 112.9 2 -0.993347413732975 0.2999382649774533 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 111001 15769 TLDFTSQFG True NCI_RA007_Epitope_Rep2 1014.4658260775799 1014.4652749679301 66.056 1 -0.9934324495925102 0.29994766013984137 1.0 ['SHANK1|p.L1994Sfs*41|1|0.5|ENSG00000161681|chr19:50662472-50662473|-/G|frameshift_variant', 'nc|ENSG00000161681|Q9Y566-3|SHANK1', 'ENSG00000161681|ENST00000293441|SHANK1', 'nc|ENSG00000161681|Q9Y566-2|SHANK1'] 61022 17158 LLAQISALAL True PC9_epitope_Rep5 1011.6328318330299 1011.63172993586 71.02 2 -0.9934594291671214 0.2999664497081125 1.0 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 35975 6872 GVAVMVLMVP True NCI_RA007_Epitope_Rep1 1014.5605954928999 1014.55948993586 30.734 2 -0.9934604319003765 0.2999664497081125 1.0 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1', 'ABCC1|p.Q718Lfs*20|2|0.14|ENSG00000103222|chr16:16083398-16083407|GATTCAGAAT/-|frameshift_variant', 'ENST00000574224.1_1_16:16108407-16150188:+|nuORF'] 20546 13109 EQAQQIRLQAE True NCI_RA007_Epitope_Rep1 1312.6735274280397 1312.67242993586 54.985 2 -0.9935072299328727 0.2999758441140158 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 65930 25031 LSLKPGQG True PC9_epitope_Rep5 798.4599528514998 798.45884993586 101.42 2 -0.9935105428193267 0.2999812125929306 1.0 ['ENSG00000248713|ENST00000511828|C4orf54'] 131470 24739 VVTVGVITVL True PC9_epitope_Rep4 998.6375828603 998.63648993586 103.66 2 -0.9935483580437953 0.2999812125929306 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 46158 7997 ITCRYRDYRYP True H1975_Epitope_Rep3 1504.7245174550799 1504.7234299358602 35.731 2 -0.9936219029809835 0.3000053675424707 1.0 ['ENSG00000171714|ENST00000324559|ANO5', 'ANO5|p.L845*|1|0.27|ENSG00000171714|chr11:22279553-22279553|T/-|frameshift_variant', 'ENST00000532043.1_1_11:22294373-22299379:+|nuORF'] 54870 6354 LAGHQRVGR True NCI_RA007_Epitope_Rep5 992.5627952105998 992.56168993586 31.116 2 -0.9936557846068886 0.3000053675424707 1.0 ['ENST00000304494.9_2_9:21974788-21975004:-|nuORF'] 93434 4390 RRYSDQIMTFR True PC9_epitope_Rep5 1471.7354164919495 1471.7337749037902 21.957 3 -0.9936600102543696 0.3000053675424707 1.0 ['ABRAXAS1|p.H105Y|1|0.28|ENSG00000163322|chr4:83470366-83470366|G/A|missense_variant'] 119322 11805 VELRWTPP True H1975_Epitope_Rep3 996.5392658013599 996.53816993586 50.555 2 -0.993669752750059 0.3000053675424707 1.0 ['ENSG00000142627|ENST00000358432|EPHA2', 'nc|ENSG00000142627|P29317-2|EPHA2'] 127889 21396 VRPGHGKG True PC9_epitope_Rep5 806.4511195033 806.45002993586 87.361 2 -0.9936938255178883 0.300010734796844 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 140382 4061 YYERNELYREK True NCI_RA007_Epitope_Rep2 1561.7525060247297 1561.7508749037902 20.436 3 -0.9937120574475494 0.300010734796844 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 111432 12200 TLKNGTFEKE True PC9_epitope_Rep2 1165.59790287629 1165.5962549037902 52.238 3 -0.9937142536224124 0.3000120761603177 1.0 ['ENST00000590008.5_1_19:38161161-38167293:-|nuORF'] 111791 10596 TLQWDTDP True PC9_epitope_Rep2 974.4345259492999 974.43342993586 46.073 2 -0.9937310833743753 0.3000120761603177 1.0 ['nc|ENSG00000158560|O14576|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1'] 45983 4932 ISSWRNDR True NCI_RA007_Epitope_Rep2 1032.5100909313999 1032.5089899358602 23.805 2 -0.9937715842852036 0.3000120761603177 1.0 ['nc|ENSG00000234414|P0DJD3-3|RBMY1A1', 'nc|ENSG00000226941|Q15415-2|RBMY1F', 'nc|ENSG00000244395|P0C7P1-2|RBMY1D', 'nc|ENSG00000234414|P0DJD3-2|RBMY1A1', 'nc|ENSG700|P0DJD4|RBMY1C', 'ENSG00000244395|ENST00000382680|RBMY1D', 'ENSG00000242875|ENST00000383020|RBMY1B', 'ENSG00000242389|ENST00000382659|RBMY1E', 'ENSG00000234414|ENST00000382707|RBMY1A1', 'ENSG00000226941|ENST00000250831|RBMY1J', 'ENSG00000169800|ENST00000303766|RBMY1F'] 18832 5926 ELEEDVKIYLD True NCI_RA007_Epitope_Rep1 1364.6711273861997 1364.6694749037902 27.098 3 -0.9938381159387114 0.3000174428745857 1.0 ['nc|ENSG00000135916|Q9NQX7-2|ITM2C', 'nc|ENSG00000135916|Q9NQX7-3|ITM2C', 'ENSG00000135916|ENST00000326427|ITM2C'] 71246 19481 MGDDCNCPCDM True NCI_RA007_Epitope_Rep4 1202.31707294586 1202.31596993586 84.2 2 -0.9938393397111254 0.3000174428745857 1.0 ['ENST00000431629.5_2_7:114654517-114655986:+|nuORF', 'ENSG00000135272|ENST00000393486|MDFIC', 'nc|ENSG00000135272|Q9P1T7-1|MDFIC'] 126800 14237 VPSQVVNV True PC9_epitope_Rep5 840.4705175352 840.46942993586 59.768 2 -0.993894535800193 0.30006708707902857 1.0 ['ENSG00000197181|ENST00000356766|PIWIL2', 'nc|ENSG00000197181|Q8TC59-2|PIWIL2'] 13166 6757 DLSWQLDGK True H1975_Epitope_Rep3 1060.5189242795998 1060.5178299358602 30.943 2 -0.993968750380256 0.3001033127155143 1.0 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD', 'nc|ENSG00000129116|Q8WX93-4|PALLD', 'nc|ENSG00000129116|Q8WX93-7|PALLD', 'ENST00000507699.1_1_4:169819634-169847533:+|nuORF', 'nc|ENSG00000129116|Q8WX93-8|PALLD', 'nc|ENSG00000129116|Q8WX93-5|PALLD', 'nc|ENSG00000129116|Q8WX93-2|PALLD', 'ENSG00000129116|ENST00000505667|PALLD'] 62553 13197 LLTLEIAR True PC9_epitope_Rep5 927.5753169569099 927.57420993586 55.769 2 -0.9940140821846782 0.3001127032683948 1.0 ['ENST00000513544.5_1_17:48545259-48551043:+|nuORF'] 10855 7761 DALKLSSDVQK True H1975_Epitope_Rep3 1202.65066672514 1202.6495699358602 34.837 2 -0.9940505540359251 0.3001274568994432 1.0 ['nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|O94854-4|MACF1'] 9433 6124 AVVRPHAL True PC9_epitope_Rep4 861.5184707871298 861.51736993586 30.568 2 -0.9940520700380169 0.3001274568994432 1.0 ['CSN3|p.Q92L|1|0.09|ENSG00000171209|chr4:70249185-70249185|A/T|missense_variant'] 99498 6699 SLEQWAAW True NCI_RA007_Epitope_Rep2 989.4606811274898 989.45958993586 30.671 2 -0.9940560648796479 0.3001274568994432 1.0 ['ENSG00000132005|ENST00000254325|RFX1'] 130015 13385 VTPPAPVQN True PC9_epitope_Rep5 921.4919812557699 921.49088993586 56.502 2 -0.9941193117155948 0.30013684662444995 1.0 ['ENSG00000225830|ENST00000355832|ERCC6', 'nc|ENSG00000225830|P0DP91|ERCC6', 'ERCC6|p.N312Tfs*17|1|0.29|ENSG00000225830|chr10:49524495-49524495|T/-|frameshift_variant'] 128069 27272 VRRLPGGG True PC9_epitope_Rep1 810.4824196315798 810.48132993586 111.44 2 -0.9942137188185833 0.30015965225324337 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 78855 10845 PERRYFYWY True PC9_epitope_Rep5 1378.6458561282197 1378.64422490379 46.704 3 -0.9942435175579637 0.30016904129437333 1.0 ['nc|ENSG00000078549|P41586-5|ADCYAP1R1', 'nc|ENSG00000078549|P41586-3|ADCYAP1R1', 'ENSG00000078549|ENST00000304166|ADCYAP1R1', 'nc|ENSG00000078549|P41586-4|ADCYAP1R1', 'nc|ENSG00000078549|P41586-2|ADCYAP1R1'] 124446 8338 VLERRYSDFAK True H1975_Epitope_Rep1 1382.7306483813397 1382.7295499358602 37.003 2 -0.9943411442836598 0.30021464985242824 1.0 ['ENSG00000167208|ENST00000330943|SNX20'] 78497 18833 PDGKIQVKAI True PC9_epitope_Rep1 1067.63389446219 1067.63278993586 77.226 2 -0.9943664932282814 0.30021464985242824 1.0 ['nc|ENSG00000089091|Q9NVP4-5|DZANK1', 'nc|ENSG00000089091|Q9NVP4|DZANK1', 'ENSG00000089091|ENST00000699568|DZANK1', 'nc|ENSG00000089091|Q9NVP4-3|DZANK1'] 99602 13428 SLFNSIHQV True PC9_epitope_Rep5 1043.5399940773502 1043.5388899358602 56.666 2 -0.9944432542652208 0.30023878514702723 1.0 ['ENST00000488250.5_1_12:48131352-48135452:-|nuORF', 'nc|ENSG00000079337|O95398-3|RAPGEF3', 'ENSG00000079337|ENST00000449771|RAPGEF3'] 46632 10534 ITTRPNRIYMT True H1975_Epitope_Rep1 1364.7234548259198 1364.7223499358602 45.474 2 -0.9945218171159549 0.30023878514702723 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 25015 24585 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 99.431 2 -0.9945242855526851 0.30023878514702723 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 131420 23326 VVTLLSNY True PC9_epitope_Rep4 907.50148331031 907.50038993586 97.983 2 -0.9945401276889714 0.30023878514702723 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 71245 19750 MGDDCNCPCDM True NCI_RA007_Epitope_Rep3 1202.31707294586 1202.31596993586 86.094 2 -0.9946316456640116 0.30027633202768683 1.0 ['ENST00000431629.5_2_7:114654517-114655986:+|nuORF', 'ENSG00000135272|ENST00000393486|MDFIC', 'nc|ENSG00000135272|Q9P1T7-1|MDFIC'] 20039 7535 ENADSWIPPKR True H1975_Epitope_Rep1 1311.6571490879098 1311.6560499358602 33.977 2 -0.9946436006461169 0.30027633202768683 1.0 ['ENST00000609948.1_1_9:131085485-131085647:+|nuORF'] 39149 4422 HLEGRDPDI True NCI_RA007_Epitope_Rep3 1050.50942222506 1050.50832993586 24.188 2 -0.9946457662676453 0.30027633202768683 1.0 ['ENSG00000140718|ENST00000471389|FTO'] 8632 12576 AVALTTSRRQH True H1975_Epitope_Rep3 1238.6843668952602 1238.6832699358602 53.576 2 -0.99469955670374 0.30027633202768683 1.0 ['ENSG00000003393|ENST00000264276|ALS2'] 119965 6426 VEYRLVQS True PC9_epitope_Rep2 992.5290950404799 992.52798993586 30.127 2 -0.9947688732146701 0.30028704796652 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant', 'PLXNA3|p.S956Lfs*51|1|0.53|ENSG00000130827|chrX:154466439-154466440|-/T|frameshift_variant'] 98817 12025 SITPLESEI True PC9_epitope_Rep5 987.51244191683 987.51134993586 51.248 2 -0.9947731443553512 0.30028704796652 1.0 ['ENSG00000125772|ENST00000379019|GPCPD1', 'ENST00000433031.1_1_7:57217543-57217852:-|nuORF'] 131111 6376 VVNFITFFIFL True NCI_RA007_Epitope_Rep5 1358.7638460025798 1358.76220490379 31.198 3 -0.9947768500589736 0.30028704796652 1.0 ['ENSG00000139133|ENST00000266483|ALG10'] 3343 4545 AGHINFSFSR True PC9_epitope_Rep6 1134.5570411238202 1134.55540490379 24.736 3 -0.9947786204989684 0.30028704796652 1.0 ['ENST00000266659.7_2_12:75893342-75893732:+|nuORF'] 71334 11038 MHIPHSLA True PC9_epitope_Rep1 904.4589073056801 904.45780993586 47.345 2 -0.9949607142357724 0.3003903263450163 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 1156 7568 AEASEFEDPL True NCI_RA007_Epitope_Rep4 1106.4767846841 1106.4756899358601 35.759 2 -0.9950336872444249 0.30040909395748105 1.0 ['ENST00000446331.6_1_8:11660331-11696115:+|nuORF'] 125271 15081 VLRLVVPRRP True PC9_epitope_Rep2 1203.7927951454299 1203.7911449037902 63.267 3 -0.995043714688033 0.30040909395748105 1.0 ['ENST00000462833.5_1_3:123167964-123168408:-|nuORF'] 58408 18982 LEVRNSKSI True H1975_Epitope_Rep1 1044.5927579262 1044.5916699358602 79.144 2 -0.9951233407696893 0.30041847738612587 1.0 ['nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1', 'nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1', 'NEO1|p.D1259Ifs*101|1|0.33|ENSG00000067141|chr15:73293422-73293422|G/-|frameshift_variant'] 96514 17945 SELGDFRFTL True PC9_epitope_Rep3 1183.5873381925899 1183.58624993586 74.229 2 -0.9951378352423481 0.30043321396477957 1.0 ['ENSG00000115275|ENST00000448666|MOGS', 'ENST00000462189.1_1_2:74688404-74690534:-|nuORF', 'nc|ENSG00000115275|Q13724-2|MOGS', 'ENST00000489655.1_1_2:74689957-74690534:-|nuORF'] 12577 6371 DLDPVSEDP True H1975_Epitope_Rep2 985.42402083525 985.42347496793 29.433 1 -0.9951461006503104 0.30043321396477957 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 25038 60 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 0.34754 2 -0.9951652639693619 0.30043321396477957 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 122427 9076 VGSKLAYV True PC9_epitope_Rep4 835.48035394291 835.47924993586 42.494 2 -0.9951877458465096 0.30046942060085835 1.0 ['ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 60293 13378 LIEQYELREEH True PC9_epitope_Rep3 1457.71505788685 1457.7134249037902 56.49 3 -0.9952240186400619 0.30049221442845453 1.0 ['ENSG00000084652|ENST00000373610|TXLNA'] 66784 13253 LSVGIKAA True PC9_epitope_Rep2 757.46978925921 757.46868993586 56.253 2 -0.9952573261193332 0.3005015959872321 1.0 ['ENST00000429685.1_1_2:203044091-203044292:+|nuORF'] 138444 24223 YRETDKKKKK True PC9_epitope_Rep5 1322.7670338900596 1322.7653849037902 98.18 3 -0.9953486162769649 0.3005337696475511 1.0 ['nc|ENSG00000136848|Q5VWQ8-3|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-4|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-2|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-5|DAB2IP', 'ENSG00000136848|ENST00000408936|DAB2IP'] 39887 10417 HQIQEMFPEVP True PC9_epitope_Rep1 1353.63872214245 1353.6370649037901 44.953 3 -0.9953587557277054 0.3005337696475511 1.0 ['AMFR|p.Q470E|2|0.49|ENSG00000159461|chr16:56369300-56369300|G/C|missense_variant'] 136021 19602 YFNRFLQWKWL True PC9_epitope_Rep3 1599.8350538802297 1599.83341490379 80.636 3 -0.995370373472202 0.30055253064399323 1.0 ['ENST00000400595.3_1_13:21893667-21894339:+|nuORF', 'nc|ENSG00000198055|P43250-3|GRK6', 'ENSG00000198055|ENST00000355472|GRK6', 'nc|ENSG00000198055|P43250-2|GRK6'] 109024 5675 TEWLQSVKWYW True H1975_Epitope_Rep3 1524.7401504358797 1524.73849490379 26.857 3 -0.9953709482339812 0.30055253064399323 1.0 ['ENSG00000137628|ENST00000393743|DDX60'] 134738 3014 WWWLGSRRW True NCI_RA007_Epitope_Rep1 1331.6675946323098 1331.66593490379 15.591 3 -0.9954096034918125 0.30056191076481553 1.0 ['nc|ENSG00000171867|F7VJQ1|PRNP'] 76818 12538 NVELISQYNGY True NCI_RA007_Epitope_Rep1 1298.6142812164198 1298.6131899358602 52.749 2 -0.9954476692685833 0.30056725985329025 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 59308 12477 LGHPDFCL True PC9_epitope_Rep6 900.41637378736 900.41526993586 59.415 2 -0.9954779678034155 0.30056725985329025 1.0 ['ENST00000324015.7_1_17:1657824-1658322:+|nuORF'] 41523 8809 IDARLKALQEY True NCI_RA007_Epitope_Rep2 1318.7245003717399 1318.72285490379 38.913 3 -0.9956924410400243 0.30065438356531765 1.0 ['nc|ENSG00000104983|Q9Y6R9-2|CCDC61', 'ENSG00000104983|ENST00000595358|CCDC61'] 56931 6981 LEDSLLCP True H1975_Epitope_Rep3 888.42626976472 888.42516993586 31.815 2 -0.9957010713749539 0.30065438356531765 1.0 ['nc|ENSG00000090061|O75909-2|CCNK'] 22112 6787 ESVTLKWEP True H1975_Epitope_Rep2 1087.55497543515 1087.5538699358601 31.022 2 -0.9957140997753966 0.30065438356531765 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 55332 5277 LASAEKLMYFC True PC9_epitope_Rep3 1274.60391685686 1274.60227490379 25.378 3 -0.995748636071874 0.30065438356531765 1.0 ['ENSG00000160007|ENST00000672722|ARHGAP35', 'ARHGAP35|p.W1401*|1|0.32|ENSG00000160007|chr19:47000389-47000398|TGGCCCACCT/-|frameshift_variant', 'ARHGAP35|p.V820Ffs*3|1|0.45|ENSG00000160007|chr19:46921132-46921133|TG/-|frameshift_variant', 'ARHGAP35|p.R1098Mfs*45|1|0.13|ENSG00000160007|chr19:46921966-46921969|AAGG/-|frameshift_variant', 'ARHGAP35|p.R689Gfs*5|1|0.22|ENSG00000160007|chr19:46920738-46920738|G/-|frameshift_variant'] 56122 17280 LDLVFNFY True H1975_Epitope_Rep2 1029.51713337445 1029.5160299358602 71.758 2 -0.9957562648302078 0.30065438356531765 1.0 ['ENSG00000042753|ENST00000263270|AP2S1', 'nc|ENSG00000042753|P53680-2|AP2S1'] 13819 19231 DQVKQMEIE True PC9_epitope_Rep1 1118.52777471114 1118.5266699358601 78.772 2 -0.9957891523485184 0.30065972967174426 1.0 ['ARAP2|p.D1308E|1|0.36|ENSG00000047365|chr4:36119689-36119689|G/C|missense_variant'] 86875 12174 QRRHHRRWREP True H1975_Epitope_Rep1 1612.8671909105597 1612.8660899358601 51.846 2 -0.9958002300381269 0.30065972967174426 1.0 ['ENSG00000132716|ENST00000368074|DCAF8'] 72606 13276 MVSQSFTQLF True PC9_epitope_Rep1 1186.5692456003 1186.56760490379 55.93 3 -0.9958455049746031 0.3006838294448914 1.0 ['HRH3|p.R347L|1|0.34|ENSG00000101180|chr20:62216304-62216304|C/A|missense_variant'] 18737 16573 ELDLRGYKIP True PC9_epitope_Rep1 1202.66592286646 1202.66482993586 68.571 2 -0.9958534307949644 0.3006838294448914 1.0 ['ENST00000395613.2_1_22:51193627-51193861:-|nuORF', 'ENST00000558020.1_1_15:101828356-101835383:-|nuORF', 'ENST00000560856.5_1_15:101827905-101835383:-|nuORF', 'ENST00000558036.5_1_15:101827046-101835383:-|nuORF', 'ENSG00000131876|ENST00000254193|SNRPA1'] 131463 24951 VVTVGVITVL True NCI_RA007_Epitope_Rep5 998.6375828603 998.63648993586 103.47 2 -0.9958641800839576 0.3006838294448914 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 85428 9342 QLESFYIQ True PC9_epitope_Rep6 1026.5022115863 1026.50110993586 46.118 2 -0.995880572836641 0.3006838294448914 1.0 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000566672.5_1_15:72638574-72647950:-|nuORF', 'nc|ENSG00000213614|P06865-2|HEXA', 'ENST00000568777.5_1_15:72638642-72646100:-|nuORF'] 104467 10917 SSLRFLQAP True PC9_epitope_Rep6 1017.5607295219298 1017.55962993586 52.859 2 -0.9959457249885156 0.3006891743316082 1.0 ['ENSG00000120709|ENST00000239906|FAM53C'] 52224 24292 KNATPGKN True PC9_epitope_Rep4 828.44536541652 828.44426993586 101.92 2 -0.9959657089416742 0.3006891743316082 1.0 ['ENSG00000133056|ENST00000684373|PIK3C2B', 'PIK3C2B|p.R970Pfs*17|1|0.25|ENSG00000133056|chr1:204443543-204443556|CAGATACTGGTAGC/-|frameshift_variant'] 54401 25175 KYRRTLKRHLL True PC9_epitope_Rep5 1482.9259345732999 1482.92482993586 101.98 2 -0.9960156545188176 0.3007253663703525 1.0 ['nc|ENSG00000205189|Q96DT7-4|ZBTB10', 'nc|ENSG00000205189|Q96DT7-3|ZBTB10', 'nc|ENSG00000205189|Q96DT7-2|ZBTB10', 'ENSG00000205189|ENST00000455036|ZBTB10'] 135866 5657 YERHWPSQP True NCI_RA007_Epitope_Rep1 1198.55195574338 1198.5503249037902 26.064 3 -0.9960321711619325 0.3007347420358254 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 57934 9836 LEQMRRQAEK True PC9_epitope_Rep2 1287.67175360623 1287.6700949037902 43.17 3 -0.9960561483601498 0.3007360531996192 1.0 ['ENSG00000172409|ENST00000533682|CLP1', 'nc|ENSG00000172409|Q92989-2|CLP1'] 134802 4432 WYPYNYSR True NCI_RA007_Epitope_Rep5 1147.50869394907 1147.50703490379 23.685 3 -0.9960630664744118 0.3007360531996192 1.0 ['nc|ENSG00000144048|O75319-1|DUSP11', 'ENSG00000144048|ENST00000272444|DUSP11'] 108155 18188 TDRQLFDTI True PC9_epitope_Rep3 1107.5560380643099 1107.5549499358601 75.169 2 -0.99606723729875 0.3007360531996192 1.0 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G'] 14831 10334 DYEATRLEGLP True H1975_Epitope_Rep1 1262.6142812164198 1262.6131899358602 44.697 2 -0.9960750950629619 0.30074542821901645 1.0 ['nc|ENSG00000102103|O60828-7|PQBP1', 'nc|ENSG00000102103|O60828-10|PQBP1', 'nc|ENSG00000102103|O60828-9|PQBP1', 'ENST00000486150.5_1_X:48755780-48758817:+|nuORF', 'nc|ENSG00000102103|O60828-6|PQBP1', 'ENST00000470062.5_1_X:48755362-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-5|PQBP1', 'nc|ENSG00000102103|O60828-4|PQBP1', 'ENST00000472742.5_1_X:48755271-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-3|PQBP1', 'nc|ENSG00000102103|O60828-2|PQBP1', 'ENSG00000102103|ENST00000447146|PQBP1', 'nc|ENSG00000102103|O60828-8|PQBP1'] 10982 14519 DCYVDHVL True PC9_epitope_Rep3 962.4167677101799 962.41566993586 60.97 2 -0.9961480810904023 0.30076820978964725 1.0 ['ENST00000610272.1_1_1:179850989-179851172:-|nuORF'] 36582 12687 GVLGALTEMC True NCI_RA007_Epitope_Rep3 992.4670890308801 992.46598993586 57.147 2 -0.9962465130395083 0.300844617240917 1.0 ['ENST00000450638.5_2_22:31003348-31006244:+|nuORF', 'nc|ENSG00000185339|P20062-2|TCN2', 'ENSG00000185339|ENST00000215838|TCN2'] 123910 24511 VKIKIKAEIKK True NCI_RA007_Epitope_Rep3 1296.8856924707595 1296.88458993586 106.05 2 -0.9963260920008831 0.3008539904277996 1.0 ['L1P4_dup2393|chr10:47974237-47974904:-|1.0496562154306903|0.1836211835218236|2.52|474.0|3|1|sense'] 78876 15149 PETATMNKL True NCI_RA007_Epitope_Rep5 1003.50083168731 1003.49972993586 64.95 2 -0.9963590809380366 0.3008727360476184 1.0 ['ENST00000510023.5_1_17:47074855-47081966:+|nuORF'] 140894 11433 YYVFDRRWDRF True H1975_Epitope_Rep3 1621.7789955560895 1621.77788993586 49.096 2 -0.9963616885676286 0.3008727360476184 1.0 ['ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1'] 120376 9231 VFRRRWRLNFN True NCI_RA007_Epitope_Rep1 1562.8694823263397 1562.86838993586 39.906 2 -0.9964395307523817 0.30093169783497553 1.0 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 20450 10832 EPRLTLGL True NCI_RA007_Epitope_Rep4 897.5283667644899 897.52726993586 48.517 2 -0.9965018566859833 0.30093169783497553 1.0 ['nc|ENSG00000285253|Q6N043-4|ZNF280D'] 36543 4980 GVKYHRCVK True NCI_RA007_Epitope_Rep4 1088.59131845756 1088.5902299358602 25.63 2 -0.9966330657216731 0.30095981125499344 1.0 ['ENSG00000161551|ENST00000638348|ZNF577'] 98583 11140 SINDLERETQP True PC9_epitope_Rep1 1300.62590852928 1300.6248099358602 47.734 2 -0.9966360227152016 0.30095981125499344 1.0 ['ENSG00000197299|ENST00000355112|BLM'] 109403 13258 TGPRCEVQL True PC9_epitope_Rep2 1001.4964150132098 1001.49530993586 56.271 2 -0.9966461022135028 0.30095981125499344 1.0 ['ENSG00000010327|ENST00000321725|STAB1', 'ENST00000462741.5_1_3:52555417-52555721:+|nuORF'] 138739 24857 YSALINAAIRK True NCI_RA007_Epitope_Rep1 1218.70845638478 1218.70734993586 102.89 2 -0.9967032470285941 0.30096918189251864 1.0 ['ENSG00000106246|ENST00000292478|PTCD1'] 28340 17289 FSAWLHCVCV True PC9_epitope_Rep6 1163.5256069665102 1163.5245099358601 79.108 2 -0.9967282480163038 0.30098388783142543 1.0 ['ENSG00000174839|ENST00000311128|DENND6A', 'DENND6A|p.A359Cfs*2|1|0.49|ENSG00000174839|chr3:57641710-57641711|-/A|frameshift_variant'] 82429 22428 PVCGSDGE True H1975_Epitope_Rep1 762.28541918746 762.28487496793 93.304 1 -0.996754755818807 0.30098388783142543 1.0 ['nc|ENSG00000168843|Q8N475-3|FSTL5', 'nc|ENSG00000168843|Q8N475-2|FSTL5', 'ENSG00000168843|ENST00000306100|FSTL5', 'FSTL5|p.F107L|1|0.28|ENSG00000168843|chr4:161920492-161920492|G/C|missense_variant'] 19813 14472 ELTQSFHRL True PC9_epitope_Rep2 1129.58800689893 1129.5869099358601 60.937 2 -0.9968015849038308 0.30098388783142543 1.0 ['nc|ENSG00000141441|Q9H706-2|GAREM1', 'nc|ENSG00000141441|Q9H706-3|GAREM1', 'ENSG00000141441|ENST00000269209|GAREM1'] 61671 7331 LLHQTQSAL True PC9_epitope_Rep3 1009.55564414149 1009.55454993586 33.208 2 -0.9968334523666001 0.3009932576437945 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2'] 106558 14523 SVVYLLINS True NCI_RA007_Epitope_Rep2 1006.5698972233 1006.56880993586 61.155 2 -0.996904394542417 0.30100392724543273 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 84190 6047 QESSYVCDE True H1975_Epitope_Rep3 1058.38625542754 1058.38514993586 28.273 2 -0.9969361857021536 0.30100392724543273 1.0 ['nc|ENSG00000157429|P17023-2|ZNF19', 'ENSG00000157429|ENST00000288177|ZNF19'] 115446 11217 TVFLSTWNK True NCI_RA007_Epitope_Rep5 1094.5760452329 1094.57494993586 49.782 2 -0.9969633735577679 0.30100392724543273 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF'] 86497 18796 QRAAPWWAPAW True PC9_epitope_Rep4 1338.6621748987 1338.66106993586 80.385 2 -0.9969868024911789 0.30100392724543273 1.0 ['ENST00000244565.7_1_6:41000663-41001646:-|nuORF'] 9791 9919 AYLHLSNV True PC9_epitope_Rep4 915.4814165720701 915.48030993586 45.805 2 -0.9970173336539645 0.3010132961612696 1.0 ['ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 31396 7545 GEAVVSAPSAP True H1975_Epitope_Rep3 983.4923751785899 983.49126993586 34.004 2 -0.9970367468818343 0.30102266482595935 1.0 ['ENST00000603475.1_1_9:90584039-90584273:-|nuORF'] 64280 17491 LQLNEHGNV True PC9_epitope_Rep4 1022.5145076055001 1022.5134099358601 75.28 2 -0.9971687734037629 0.3010856453558504 1.0 ['CWH43|p.T595N|1|0.22|ENSG00000109182|chr4:49038161-49038161|C/A|missense_variant'] 18841 10379 ELEEQNPNVQD True H1975_Epitope_Rep3 1313.57353860325 1313.57244993586 44.979 2 -0.9972185709540559 0.3011043799924945 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant'] 19148 6705 ELISFPLKEYF True H1975_Epitope_Rep1 1384.72785441668 1384.7262149037902 30.837 3 -0.997225897057635 0.3011043799924945 1.0 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 111417 18558 TLKIFFFFFF True PC9_epitope_Rep5 1355.7318175983098 1355.7307299358602 76.407 2 -0.9972482664998965 0.3011097113142306 1.0 ['ENST00000392708.8_1_11:125490725-125490788:+|nuORF'] 112656 10349 TPFGKAAA True PC9_epitope_Rep5 761.4071890026498 761.40608993586 44.792 2 -0.9972945518374612 0.3011097113142306 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'nc|ENSG00000204271|Q5JUX0-2|SPIN3', 'SPIN3|p.G19Afs*9|1|0.28|ENSG00000204271|chrX:56994892-56994892|C/-|frameshift_variant'] 84402 5889 QGEVTVASIDD True NCI_RA007_Epitope_Rep4 1132.52479750568 1132.52370993586 29.275 2 -0.9973173682353195 0.3011150423501662 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 98748 18694 SISAGLQKMV True PC9_epitope_Rep3 1032.56376629704 1032.5626699358602 77.127 2 -0.9973210665133806 0.3011150423501662 1.0 ['nc|ENSG00000136848|Q5VWQ8-3|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-4|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-2|DAB2IP', 'nc|ENSG00000136848|Q5VWQ8-5|DAB2IP', 'ENSG00000136848|ENST00000408936|DAB2IP'] 54497 16770 LAAAVPTAP True PC9_epitope_Rep2 809.4647038787699 809.46360993586 69.753 2 -0.9973363627915599 0.3011176328696631 1.0 ['ENST00000530694.5_1_11:12023362-12031257:-|nuORF', 'ENST00000533900.1_1_11:12023572-12030129:-|nuORF', 'ENST00000534479.5_1_11:12023699-12030797:-|nuORF', 'ENST00000526218.5_1_11:12000483-12031257:-|nuORF', 'ENSG00000050165|ENST00000683431|DKK3'] 15007 7509 DYWTYAGSLT True H1975_Epitope_Rep3 1175.51350454599 1175.5124099358602 33.865 2 -0.9973472964690963 0.3011176328696631 1.0 ['ENSG00000174990|ENST00000649794|CA5A'] 86876 12550 QRRHHRRWREP True NCI_RA007_Epitope_Rep1 1612.8671909105597 1612.8660899358601 52.796 2 -0.9973983243735903 0.3011176328696631 1.0 ['ENSG00000132716|ENST00000368074|DCAF8'] 81 8307 AAALRQVV True PC9_epitope_Rep3 826.50248636982 826.5019349679301 36.925 1 -0.9974064390847379 0.3011176328696631 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 35198 6763 GSDYKLIYR True H1975_Epitope_Rep3 1113.5818588893299 1113.5807699358602 30.968 2 -0.9974177386853033 0.3011176328696631 1.0 ['nc|ENSG00000242498|Q7Z6K5-2|ARPIN', 'nc|ENSG00000157823|P59780-2|AP3S2', 'ENST00000560184.5_1_15:90408823-90437190:-|nuORF', 'ENST00000560224.1_1_15:90408823-90446582:-|nuORF', 'ENSG00000157823|ENST00000336418|AP3S2'] 58349 20925 LEVDCAVWL True PC9_epitope_Rep1 1046.51066809502 1046.50956993586 85.309 2 -0.9974415367905239 0.3011176328696631 1.0 ['ENST00000451492.5_1_10:75335378-75351076:-|nuORF'] 43452 5228 IHSSSAGLGPP True H1975_Epitope_Rep2 1021.5192586327698 1021.51816993586 25.177 2 -0.9975018281001952 0.30115379976682793 1.0 ['ENST00000470271.5_1_1:41445802-41446012:+|nuORF'] 123908 24342 VKIKIKAEIKK True NCI_RA007_Epitope_Rep3 1296.8856924707595 1296.88458993586 105.35 2 -0.9975739406739013 0.301181893709967 1.0 ['L1P4_dup2393|chr10:47974237-47974904:-|1.0496562154306903|0.1836211835218236|2.52|474.0|3|1|sense'] 79312 23722 PGKKRHERL True PC9_epitope_Rep3 1119.66250925187 1119.66140993586 96.532 2 -0.9975768051762971 0.301181893709967 1.0 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2'] 26172 17584 FHRCRFCFQL True PC9_epitope_Rep5 1355.6379513801498 1355.63684993586 72.645 2 -0.9976188667105962 0.301181893709967 1.0 ['ENSG00000106034|ENST00000310396|CPED1', 'nc|ENSG00000106034|A4D0V7-2|CPED1', 'CPED1|p.H927Tfs*4|1|0.34|ENSG00000106034|chr7:121271333-121271334|-/A|frameshift_variant'] 126170 10826 VPFREMKPVI True PC9_epitope_Rep1 1214.68455013606 1214.68291490379 46.528 3 -0.9976552874553762 0.30119125785573586 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 29915 15359 FWKRHFCRYKK True NCI_RA007_Epitope_Rep2 1597.84524172445 1597.84414993586 64.441 2 -0.9977807544929684 0.3012059493501273 1.0 ['ENST00000489708.1_1_7:33545204-33545258:+|nuORF'] 15726 5625 EDDEDEDDDK True PC9_epitope_Rep1 1223.3949651045898 1223.39332490379 26.462 3 -0.997785553465264 0.3012059493501273 1.0 ['ENSG00000152377|ENST00000394945|SPOCK1'] 100564 7913 SLQAERLK True NCI_RA007_Epitope_Rep1 943.5450794577899 943.5439899358599 34.773 2 -0.9978130021603014 0.3012059493501273 1.0 ['ENSG00000196233|ENST00000421806|LCOR'] 69888 5561 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True H1975_Epitope_Rep3 1442.6356288295895 1442.6345299358602 26.436 2 -0.9978420016322208 0.301215312671678 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 113528 4573 TQTHNKSI True PC9_epitope_Rep2 927.47739382079 927.47628993586 22.958 2 -0.9979571726461846 0.3012514738985958 1.0 ['ENSG00000135298|ENST00000370598|ADGRB3'] 40263 12233 HRLRLFLDVEV True NCI_RA007_Epitope_Rep1 1395.7986683715103 1395.79756993586 51.553 2 -0.9980166057917847 0.3012701985690168 1.0 ['ENSG00000144589|ENST00000456909|STK11IP'] 65901 2541 LSLESSRQV True PC9_epitope_Rep6 1017.5454733806099 1017.54436993586 14.702 2 -0.9980298105443269 0.3012701985690168 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 15846 10591 EDLKQPMAERK True H1975_Epitope_Rep3 1343.68673496403 1343.68562993586 45.808 2 -0.9980907733657148 0.3012929590674617 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 14604 15376 DVILVESQDPP True PC9_epitope_Rep1 1210.60813320682 1210.60702993586 63.961 2 -0.9981255040114586 0.3012982836930745 1.0 ['ENSG00000174460|ENST00000310164|ZCCHC12'] 10875 6088 DAPAEKERCPA True NCI_RA007_Epitope_Rep2 1185.54482175761 1185.54372993586 28.287 2 -0.9981387077185829 0.3012982836930745 1.0 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 36500 9049 GVKGAKIK True PC9_epitope_Rep1 799.5279728416699 799.52686993586 39.658 2 -0.9981689966819199 0.301307644899381 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 5593 11515 ANVFPLNSD True PC9_epitope_Rep5 975.4661604307499 975.46506993586 49.288 2 -0.9982836149504798 0.3014509840699902 1.0 ['ENSG00000196437|ENST00000316950|ZNF569'] 133266 9442 WEHAVRLCR True PC9_epitope_Rep6 1168.5923810867198 1168.59073490379 46.55 3 -0.9983427150476262 0.3014603429796356 1.0 ['IFT80|p.D603H|1|0.18|ENSG00000068885|chr3:160279222-160279222|C/G|missense_variant'] 98850 3930 SIVDAINQAA True H1975_Epitope_Rep3 1000.5189242796 1000.51782993586 20.244 2 -0.9984331795655093 0.3015098940260715 1.0 ['ENSG00000165283|ENST00000356493|STOML2'] 26607 3233 FKKPMKKLFW True H1975_Epitope_Rep3 1351.7838702545098 1351.78222490379 17.096 3 -0.9985176734018482 0.3015460464617776 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF'] 45057 14923 IQPKLSLTL True PC9_epitope_Rep4 1011.63283183303 1011.63172993586 65.342 2 -0.998559049099503 0.3015781576550024 1.0 ['nc|ENSG00000153814|Q86VZ6-3|JAZF1', 'ENSG00000153814|ENST00000283928|JAZF1'] 131472 24691 VVTVIIII True H1975_Epitope_Rep1 868.5997407995999 868.59864993586 102.29 2 -0.9985596784215843 0.3015781576550024 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 134180 11057 WRLLKNYYKWR True PC9_epitope_Rep2 1624.89905111912 1624.89685987172 47.849 4 -0.9986102097737564 0.3016062266400525 1.0 ['ENSG00000137561|ENST00000260116|TTPA'] 40262 11876 HRLRLFLDVEV True H1975_Epitope_Rep3 1395.7986683715103 1395.79756993586 50.831 2 -0.9986162025402292 0.3016062266400525 1.0 ['ENSG00000144589|ENST00000456909|STK11IP'] 46969 10978 IVNLLTTCSTV True NCI_RA007_Epitope_Rep3 1162.6267604764203 1162.62566993586 50.269 2 -0.9986205669188184 0.3016062266400525 1.0 ['ENST00000463900.5_1_2:74756150-74756756:-|nuORF'] 115655 8827 TVKGKGCP True H1975_Epitope_Rep2 788.4214591677999 788.42036993586 38.919 2 -0.9986446476071956 0.30161558246704534 1.0 ['nc|ENSG00000145833|Q7L014|DDX46', 'ENSG00000145833|ENST00000452510|DDX46', 'ENST00000509178.5_1_5:134117763-134126202:+|nuORF', 'ENST00000505592.5_1_5:134118651-134120263:+|nuORF'] 13398 9334 DNISVTFLSL True H1975_Epitope_Rep3 1107.58119018299 1107.58008993586 40.901 2 -0.9986586948157903 0.30161685710841113 1.0 ['nc|ENSG00000119402|Q9UKT8-2|FBXW2', 'ENSG00000119402|ENST00000608872|FBXW2'] 94245 20300 RWRLPLTCLLL True NCI_RA007_Epitope_Rep5 1382.82204666838 1382.8204049037902 85.023 3 -0.9986597357799933 0.30161685710841113 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 36020 7347 GVDFTGSNGDP True H1975_Epitope_Rep1 1064.4410678817198 1064.43996993586 33.269 2 -0.998666420383125 0.30161685710841113 1.0 ['ENSG00000214078|ENST00000397443|CPNE1', 'ENST00000483495.5_1_20:34218821-34220289:-|nuORF', 'ENST00000517354.5_1_8:87559971-87563418:+|nuORF', 'CPNE3|p.Q334Sfs*4|1|0.31|ENSG00000085719|chr8:86548418-86548419|-/T|frameshift_variant', 'ENSG00000085719|ENST00000517490|CPNE3'] 30752 7776 GAPAETAVAA True PC9_epitope_Rep2 856.4290466460399 856.4279499358599 35.283 2 -0.9987295194586981 0.30166639875689866 1.0 ['ENST00000573331.5_1_17:7297739-7306647:-|nuORF'] 23222 4662 EVQPGEAATLS True NCI_RA007_Epitope_Rep2 1100.5349682665599 1100.5338699358601 22.759 2 -0.998772488567575 0.30167575315124645 1.0 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-4|IGFN1', 'nc|ENSG00000163395|Q86VF2-3|IGFN1', 'nc|ENSG00000163395|Q86VF2-2|IGFN1', 'ENST00000473483.1_1_1:201182298-201185067:+|nuORF'] 15037 4548 EAADPWWQRQQ True H1975_Epitope_Rep3 1413.64256165293 1413.64090490379 22.614 3 -0.9988168783894515 0.30170785613823586 1.0 ['nc|ENSG00000143851|P35236-3|PTPN7'] 15177 13231 EAEVTVSGRHW True H1975_Epitope_Rep2 1269.61019889549 1269.60910993586 56.021 2 -0.998827757030783 0.30170785613823586 1.0 ['ENST00000412132.1_1_6:11810894-11811329:+|nuORF'] 12959 10885 DLPEEKLP True PC9_epitope_Rep1 939.4913125494298 939.49020993586 46.753 2 -0.998893658240916 0.3017091269522355 1.0 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'ENST00000470300.5_1_1:247004234-247028597:-|nuORF', 'ENST00000483900.1_1_1:247015289-247040365:-|nuORF', 'ENST00000420969.1_1_2:162357792-162360000:-|nuORF'] 23813 7406 EYLGMLQYK True NCI_RA007_Epitope_Rep1 1143.5634319438698 1143.56179490379 32.804 3 -0.9988957230641137 0.3017091269522355 1.0 ['ENSG00000128833|ENST00000261839|MYO5C'] 123005 7002 VGWSQASAP True PC9_epitope_Rep5 901.4293809992098 901.42828993586 31.901 2 -0.998902686922226 0.3017091269522355 1.0 ['ENST00000367137.3_1_1:205779798-205779921:-|nuORF'] 45436 12248 ISDYTEQHY True H1975_Epitope_Rep2 1154.48801807414 1154.4869299358602 52.193 2 -0.9989720255312359 0.3017318742549458 1.0 ['ENST00000558140.5_1_15:60802666-60820892:+|nuORF'] 81687 2851 PRSSSLWIELC True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 15.639 3 -0.9990373925627419 0.30176801500133943 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 115114 15030 TTWGDQDFL True PC9_epitope_Rep3 1081.47163973401 1081.4705499358602 62.94 2 -0.9990705417429057 0.30179076090596163 1.0 ['FLT4|p.Q1201Rfs*12|1|0.11|ENSG00000037280|chr5:180611414-180611415|CT/-|frameshift_variant', 'nc|ENSG00000037280|P35916-1|FLT4', 'ENSG00000037280|ENST00000261937|FLT4', 'nc|ENSG00000037280|P35916-3|FLT4'] 116770 10578 TYLEPGIG True H1975_Epitope_Rep3 848.4279840168799 848.42743496793 45.757 1 -0.999118408165135 0.3018001125070317 1.0 ['nc|ENSG00000198728|Q86U70-3|LDB1', 'nc|ENSG00000198728|Q86U70-2|LDB1', 'ENSG00000198728|ENST00000673968|LDB1'] 95548 17968 SARRLRHPV True PC9_epitope_Rep2 1090.6471935409 1090.6460899358601 74.417 2 -0.9991497037189583 0.30182285737246023 1.0 ['ENSG00000205678|ENST00000381210|TECRL'] 10359 8629 CISGEWTQPP True NCI_RA007_Epitope_Rep1 1116.4909952796 1116.4898899358602 37.567 2 -0.999193350906685 0.3018322082931533 1.0 ['CON__Q28085'] 119286 14318 VELKPHDVR True PC9_epitope_Rep3 1091.60874234351 1091.60764993586 60.161 2 -0.9992546452414875 0.30189513158775866 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 99828 6048 SLGVFVRPG True PC9_epitope_Rep2 930.5287011176598 930.52760993586 28.657 2 -0.9992752106817682 0.3019178742667345 1.0 ['ENST00000551964.5_2_12:99039219-99039444:+|nuORF'] 78570 14986 PDQRDEAP True PC9_epitope_Rep3 926.4093738306199 926.40826993586 62.772 2 -0.9993155826095714 0.3019272235391806 1.0 ['ENSG00000174279|ENST00000308618|EVX2'] 32772 18948 GIATDLKIPI True PC9_epitope_Rep4 1039.62774645259 1039.62664993586 80.971 2 -0.9993521308724732 0.30193657256120426 1.0 ['ENST00000600228.5_1_19:52633831-52643082:-|nuORF'] 134347 4366 WSDARLHR True H1975_Epitope_Rep1 1039.53116072915 1039.5300699358602 21.787 2 -0.9994365196118827 0.30198609864870296 1.0 ['ENSG00000105523|ENST00000263266|FAM83E'] 86383 23888 QQLLLLGGGG True NCI_RA007_Epitope_Rep4 954.5498304850598 954.54872993586 103.62 2 -0.9995050578410046 0.30202223115039506 1.0 ['ENSG00000168806|ENST00000305641|LCMT2', 'ENST00000567039.1_1_15:43620629-43622752:-|nuORF'] 16841 9452 EFRALIAEPR True PC9_epitope_Rep5 1200.6615061923599 1200.65986490379 41.312 3 -0.999587192928444 0.3020315785244606 1.0 ['nc|ENSG00000089091|Q9NVP4-5|DZANK1', 'nc|ENSG00000089091|Q9NVP4|DZANK1', 'ENSG00000089091|ENST00000699568|DZANK1', 'nc|ENSG00000089091|Q9NVP4-3|DZANK1', 'nc|ENSG00000089091|Q9NVP4-2|DZANK1', 'nc|ENSG00000089091|Q9NVP4-4|DZANK1'] 80356 9286 PLGLAKLTGP True H1975_Epitope_Rep1 965.59096702105 965.58986993586 40.63 2 -0.999607122366375 0.302043439835025 1.0 ['ENSG00000177380|ENST00000334186|PPFIA3', 'nc|ENSG00000177380|O75145-2|PPFIA3'] 96314 6770 SEEVIIRDSPV True NCI_RA007_Epitope_Rep1 1242.6455813446998 1242.64448993586 30.342 2 -0.999684631816695 0.302043439835025 1.0 ['nc|ENSG00000156642|Q9Y639-3|NPTN', 'nc|ENSG00000156642|Q9Y639-1|NPTN', 'nc|ENSG00000156642|Q9Y639-5|NPTN', 'ENSG00000156642|ENST00000345330|NPTN', 'ENST00000563753.1_1_15:73884305-73925556:-|nuORF', 'nc|ENSG00000156642|Q9Y639-4|NPTN'] 33602 11547 GLLHTFLHNA True H1975_Epitope_Rep1 1121.59817765981 1121.5970899358601 49.401 2 -0.9997057663792887 0.302043439835025 1.0 ['ENST00000530908.5_1_21:37444388-37445177:+|nuORF'] 56564 12805 LDVSTTIYN True H1975_Epitope_Rep3 1024.5076908895599 1024.5065899358601 54.472 2 -0.9997271827846375 0.302043439835025 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2'] 110610 13166 TITHLLRTHL True H1975_Epitope_Rep1 1203.70879073795 1203.7076899358601 55.738 2 -0.9997470677106677 0.302043439835025 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5', 'ENST00000475300.1_1_10:45935943-45936950:+|nuORF'] 8796 15420 AVFFMAMI True PC9_epitope_Rep3 928.4550677951999 928.45396993586 64.467 2 -0.9997496121748528 0.302043439835025 1.0 ['ENSG00000198104|ENST00000641644|OR2T6'] 100678 4589 SLQWRHRWDTP True PC9_epitope_Rep3 1480.7323797168397 1480.73074490379 22.746 3 -0.9997512201487124 0.302043439835025 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 15331 22206 EALARRAL True PC9_epitope_Rep3 898.5348491272599 898.53374993586 90.702 2 -0.9998571138474669 0.3020699443016281 1.0 ['ENSG00000165124|ENST00000374469|SVEP1', 'nc|ENSG00000165124|Q4LDE5-2|SVEP1', 'ENST00000467821.1_1_9:113205816-113312285:-|nuORF', 'nc|ENSG00000165124|Q4LDE5-4|SVEP1', 'SVEP1|p.M2137Cfs*17|3|0.12|ENSG00000165124|chr9:110411303-110411303|G/-|frameshift_variant'] 48316 9806 KDQLQEYEK True NCI_RA007_Epitope_Rep1 1179.5771674317095 1179.57606993586 42.146 2 -0.9998810287007929 0.3020699443016281 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant'] 23317 17420 EVSSRLLL True PC9_epitope_Rep6 915.5389314481899 915.53782993586 79.621 2 -0.9998813610528495 0.3020699443016281 1.0 ['ENSG00000124134|ENST00000537075|KCNS1'] 61412 9570 LLEPWRQLG True H1975_Epitope_Rep3 1110.61857875122 1110.61748993586 41.819 2 -0.9998973808180707 0.3020699443016281 1.0 ['ENST00000383742.7_2_3:46712476-46718839:-|nuORF'] 117792 7972 VALVGGRGPP True PC9_epitope_Rep2 921.5396001545299 921.53850993586 36.028 2 -0.9999176094186908 0.3020699443016281 1.0 ['ENST00000240123.11_2_8:22432273-22432342:+|nuORF'] 121832 10684 VGNLEKWFW True NCI_RA007_Epitope_Rep3 1177.59202965021 1177.5903749037902 49.07 3 -0.9999294345924506 0.3020699443016281 1.0 ['ENSG00000172461|ENST00000302103|FUT9'] 129610 20209 VTGTIKPSV True PC9_epitope_Rep5 900.5280324113199 900.52692993586 82.78 2 -0.9999314603530595 0.3020699443016281 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 70428 11689 LYRKANYFF True PC9_epitope_Rep6 1220.6342288153598 1220.63257490379 56.092 3 -0.9999427954225178 0.3020699443016281 1.0 ['nc|ENSG00000118965|Q9P2L0|WDR35', 'ENSG00000118965|ENST00000281405|WDR35'] 99406 5021 SLEEDPWPR True NCI_RA007_Epitope_Rep4 1127.5247379360299 1127.52310490379 25.799 3 -0.9999505032073359 0.3020699443016281 1.0 ['ENSG00000170836|ENST00000305921|PPM1D', 'ENST00000392995.7_1_17:58734367-58740910:+|nuORF'] 35315 11160 GSTSLRSALRR True NCI_RA007_Epitope_Rep5 1202.68436689526 1202.6832699358602 49.563 2 -0.9999736508936469 0.3020699443016281 1.0 ['nc|ENSG00000140798|Q96J65-4|ABCC12'] 3695 5731 AGSAYFRSL True PC9_epitope_Rep1 970.4872302284999 970.48612993586 26.863 2 -1.0000066952836184 0.30210202168965056 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'nc|ENSG00000149243|Q6PF15-2|KLHL35'] 100098 6958 SLKYECRPEYY True NCI_RA007_Epitope_Rep1 1449.6598515098501 1449.6587499358602 31.07 2 -1.0000090919473792 0.30210202168965056 1.0 ['nc|ENSG00000203710|P17927|CR1', 'ENSG00000203710|ENST00000367049|CR1', 'ENST00000436595.1_1_1:207669690-207743292:+|nuORF', 'ENST00000434033.5_1_1:207669690-207707642:+|nuORF', 'ENST00000367050.8_1_1:207669597-207732429:+|nuORF'] 127195 2617 VQGSLEHTRK True NCI_RA007_Epitope_Rep3 1153.62036965637 1153.61926993586 14.756 2 -1.0000514189686538 0.30211136549249573 1.0 ['ENST00000591892.2_1_6:143806304-143824557:+|nuORF'] 13480 7943 DPDTGLVLLT True H1975_Epitope_Rep1 1042.55464108198 1042.55354993586 35.503 2 -1.0001248120722281 0.30213005234760953 1.0 ['ENST00000575531.5_1_16:4407102-4412712:-|nuORF', 'ENST00000575714.5_1_16:4408319-4455566:-|nuORF', 'nc|ENSG00000262246|P57737-2|CORO7', 'nc|ENSG00000262246|P57737-4|CORO7', 'ENSG00000262246|ENST00000251166|CORO7', 'nc|ENSG00000262246|P57737-3|CORO7', 'ENST00000572125.1_1_16:4409158-4409606:-|nuORF'] 89974 2381 RGAGSKRKRR True PC9_epitope_Rep5 1170.71700443622 1170.71536490379 13.191 3 -1.0001248763156372 0.30213005234760953 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 33061 17788 GKDYDPVAAR True PC9_epitope_Rep1 1090.5407223533398 1090.5396299358601 73.218 2 -1.0001939618336193 0.30213939539989826 1.0 ['ENSG00000101367|ENST00000375571|MAPRE1'] 15470 13418 EAPQHRDADIV True PC9_epitope_Rep1 1249.60511351505 1249.6040099358602 56.473 2 -1.0003175340267 0.30221163114490734 1.0 ['nc|ENSG00000178965|Q5RHP9-2|ERICH3', 'ENST00000433746.2_1_1:75036803-75045091:-|nuORF', 'ERICH3|p.E896Nfs*4|1|0.36|ENSG00000178965|chr1:74573024-74573024|C/-|frameshift_variant', 'ERICH3|p.A949Gfs*23|1|0.24|ENSG00000178965|chr1:74572864-74572865|-/C|frameshift_variant', 'ERICH3|p.N1120Qfs*2|1|0.34|ENSG00000178965|chr1:74572352-74572353|-/G|frameshift_variant', 'ENSG00000178965|ENST00000326665|ERICH3'] 18170 11359 EIQAHLHHP True NCI_RA007_Epitope_Rep5 1080.5464764401202 1080.5453699358602 50.344 2 -1.0003208482946744 0.30221163114490734 1.0 ['nc|ENSG00000178999|Q96GD4-4|AURKB', 'ENSG00000178999|ENST00000585124|AURKB', 'nc|ENSG00000178999|Q96GD4-5|AURKB'] 120747 10759 VGAVQHVL True PC9_epitope_Rep1 821.47593726881 821.47484993586 46.271 2 -1.0003895546826487 0.30221692682535006 1.0 ['ENST00000451055.6_1_3:122632522-122634295:-|nuORF'] 134748 12005 WWWRRRRRHR True NCI_RA007_Epitope_Rep2 1649.9140815333299 1649.9129899358602 51.288 2 -1.0004112859738368 0.30221692682535006 1.0 ['ENST00000395136.6_2_1:70687096-70687432:+|nuORF', 'ENST00000475204.5_1_1:70687068-70687435:+|nuORF', 'ENST00000370951.5_1_1:70671397-70687435:+|nuORF', 'ENST00000463877.1_1_1:70671397-70687435:+|nuORF'] 20164 11177 ENPKANEQL True PC9_epitope_Rep2 1041.50908787189 1041.50798993586 48.319 2 -1.000445456169752 0.3022234716142591 1.0 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1', 'ENSG00000141446|ENST00000269214|ESCO1', 'ESCO1|p.T344Nfs*4|1|0.24|ENSG00000141446|chr18:21573813-21573814|-/T|frameshift_variant'] 101445 894 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 5.015 2 -1.000470339280756 0.3022234716142591 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 131861 15430 VYDLTQYEH True H1975_Epitope_Rep3 1166.52440358286 1166.5233099358602 64.765 2 -1.0004768057810618 0.3022234716142591 1.0 ['ENSG00000155367|ENST00000309276|PPM1J', 'nc|ENSG00000155367|Q5JR12-2|PPM1J', 'ENST00000471106.5_1_1:113252636-113254039:-|nuORF'] 89814 20620 RFHEVKDFEQL True H1975_Epitope_Rep1 1446.7255630008997 1446.72446993586 85.732 2 -1.0004983559362817 0.3022234716142591 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 2927 9566 AFFFFLHP True NCI_RA007_Epitope_Rep5 1024.5170738047998 1024.51596993586 43.437 2 -1.000499468533911 0.3022234716142591 1.0 ['ENST00000174618.4_1_17:2304187-2304379:-|nuORF'] 58616 17639 LFFKDRYFWRR True NCI_RA007_Epitope_Rep5 1632.8677509908398 1632.86664993586 74.632 2 -1.0005556829836983 0.30223406106522815 1.0 ['ENST00000528662.6_1_11:102584081-102593757:-|nuORF', 'ENSG00000118113|ENST00000236826|MMP8', 'ENSG00000166670|ENST00000279441|MMP10'] 133178 8248 WDRRRWNFRQK True NCI_RA007_Epitope_Rep2 1646.8654595750597 1646.8643699358602 36.719 2 -1.0005946007927518 0.30223406106522815 1.0 ['ENST00000448841.5_1_10:104575113-104575296:+|nuORF'] 52973 21782 KRPARLTRREA True H1975_Epitope_Rep2 1352.8112987438801 1352.8096649037902 90.093 3 -1.0005999570936694 0.30223406106522815 1.0 ['nc|ENSG00000101278|Q9NQ39|RPS10P5'] 135991 24661 YFGCCLCCCCN True H1975_Epitope_Rep1 1230.34587097634 1230.34423490379 102.17 3 -1.0006091965890371 0.30223406106522815 1.0 ['DNAJC5B|p.C126G|1|0.16|ENSG00000147570|chr8:66080419-66080419|T/G|missense_variant'] 126231 17960 VPGVLAVAP True PC9_epitope_Rep3 821.50108938749 821.5005449679301 74.287 1 -1.0006655232211206 0.3022353098648106 1.0 ['ENST00000337304.2_1_22:39916921-39917209:+|nuORF'] 77872 5504 PAGPPGPPGAI True H1975_Epitope_Rep2 929.4970666362099 929.49596993586 26.183 2 -1.0006700198223677 0.3022353098648106 1.0 ['CON__P04258'] 82450 20037 PVDLGAPI True H1975_Epitope_Rep2 780.43815477776 780.43760496793 83.053 1 -1.0007421030416945 0.3022353098648106 1.0 ['ENSG00000071894|ENST00000616140|CPSF1'] 87756 7231 QVFPLFRHQDP True H1975_Epitope_Rep1 1382.7095190139398 1382.70842993586 32.824 2 -1.0007846389863198 0.3022807581111468 1.0 ['nc|ENSG00000167447|Q8ND04-3|SMG8', 'ENSG00000167447|ENST00000300917|SMG8', 'nc|ENSG00000167447|Q8ND04-2|SMG8'] 11109 4402 DEDYEEVVEYY True H1975_Epitope_Rep3 1451.56163650687 1451.5605299358601 22.053 2 -1.0007926535522402 0.3022807581111468 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant', 'NEB|p.K783Sfs*21|1|0.29|ENSG00000183091|chr2:151688359-151688359|T/-|frameshift_variant'] 60849 23776 LKLPAKLVLF True NCI_RA007_Epitope_Rep3 1140.7634520797599 1140.76180490379 103.05 3 -1.0008110166689723 0.30228605080707766 1.0 ['ENST00000380722.2_1_14:85996060-85996315:-|nuORF'] 119162 7372 VEKDPSRL True PC9_epitope_Rep5 942.51344497634 942.51234993586 33.313 2 -1.000814419077637 0.30228605080707766 1.0 ['ENSG00000171115|ENST00000307271|GIMAP8'] 121682 20035 VGLLKAMYQEL True H1975_Epitope_Rep1 1263.6896950861499 1263.6885899358601 83.379 2 -1.0009447622253183 0.30234083274221396 1.0 ['ENSG00000171827|ENST00000330173|ZNF570', 'ZNF570|p.G69Efs*7|1|0.33|ENSG00000171827|chr19:37476383-37476383|G/-|frameshift_variant'] 56398 5809 LDRYWAVSR True NCI_RA007_Epitope_Rep2 1164.60399131624 1164.60235490379 27.214 3 -1.0009518075537138 0.30234083274221396 1.0 ['ENSG00000274286|ENST00000620793|ADRA2B'] 40565 3456 HSSREMKLPLD True NCI_RA007_Epitope_Rep1 1311.66052021619 1311.65887490379 17.342 3 -1.0009528743553293 0.30234083274221396 1.0 ['nc|ENSG00000188158|Q6T4R5-2|NHS', 'ENSG00000188158|ENST00000676302|NHS', 'nc|ENSG00000188158|Q6T4R5-4|NHS', 'nc|ENSG00000188158|Q6T4R5-3|NHS'] 90616 5075 RKKKKKKK True PC9_epitope_Rep3 1070.7764168052997 1070.7753099358602 24.606 2 -1.000997185152675 0.3023461234759566 1.0 ['AluSc_dup13832|chr7:33006087-33006413:-|3.1359140164592656|0.4159080058002372|2.91|502.0|10|3|sense', 'ENST00000308713.9_3_16:29910378-29910510:-|nuORF', 'ENST00000439685.6_1_3:112358751-112359896:-|nuORF', 'ENST00000475181.1_1_3:112359734-112359896:-|nuORF', 'ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 73675 23576 NGNGHEHC True PC9_epitope_Rep4 866.3089485967 866.30784993586 98.991 2 -1.0010085488538671 0.3023461234759566 1.0 ['NMT1-NME1|1|fusion', 'ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'NMT1|p.L84Ffs*50|1|0.27|ENSG00000136448|chr17:45086515-45086516|-/TT|frameshift_variant', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 45475 8485 ISELDRLEEK True NCI_RA007_Epitope_Rep2 1230.6455813446998 1230.64448993586 37.648 2 -1.0011620722222927 0.302391563282076 1.0 ['nc|ENSG00000118407|Q7Z7B0-2|FILIP1', 'ENSG00000118407|ENST00000237172|FILIP1', 'FILIP1|p.G1085Vfs*9|1|0.23|ENSG00000118407|chr6:75312572-75312578|CTGACTC/-|frameshift_variant'] 1690 5137 AEGPIPCRRM True H1975_Epitope_Rep2 1128.55321869668 1128.5521299358602 24.836 2 -1.0011748820235966 0.302391563282076 1.0 ['nc|ENSG00000080845|Q9Y2H0-1|DLGAP4', 'ENSG00000080845|ENST00000339266|DLGAP4'] 104942 7865 STGYDPVKL True H1975_Epitope_Rep3 978.5022115862998 978.50110993586 35.228 2 -1.0012349090589214 0.3023968523747708 1.0 ['ENSG00000126261|ENST00000246548|UBA2', 'nc|ENSG00000126261|Q9UBT2-2|UBA2'] 68541 20695 LTWDILHQ True PC9_epitope_Rep6 1024.53418042092 1024.53308993586 92.367 2 -1.001247480058933 0.3023968523747708 1.0 ['CON__P28800'] 63303 8022 LPCMSQKSY True H1975_Epitope_Rep2 1055.47798806775 1055.47688993586 35.804 2 -1.0012834272443918 0.3024061881055618 1.0 ['ENST00000486209.5_1_22:21830876-21832684:-|nuORF'] 61011 15212 LLAMHRFL True PC9_epitope_Rep1 999.56879210783 999.56768993586 63.333 2 -1.001303095538395 0.30241552358648377 1.0 ['ENSG00000148842|ENST00000369878|CNNM2', 'nc|ENSG00000148842|Q9H8M5-2|CNNM2'] 42091 5727 IEEKEEDLKR True H1975_Epitope_Rep3 1287.6670450652698 1287.66538490379 27.057 3 -1.001318929796892 0.30242485881754677 1.0 ['ENSG00000118985|ENST00000237853|ELL2', 'nc|ENSG00000118985|O00472-2|ELL2'] 48505 8992 KEFLHFLTDQF True H1975_Epitope_Rep3 1423.7136013348697 1423.71250993586 39.583 2 -1.0013422581761107 0.3024341937987608 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'LY75|p.E1442Kfs*4|1|0.35|ENSG00000054219|chr2:159816862-159816862|C/-|frameshift_variant', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 71752 10345 MMNKVFGG True NCI_RA007_Epitope_Rep1 882.4091802319399 882.40808993586 44.229 2 -1.0013593985353189 0.3024394813258574 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 22115 10554 ESVVQVRMDP True NCI_RA007_Epitope_Rep1 1158.57030822946 1158.56920993586 45.036 2 -1.0013599482025077 0.3024394813258574 1.0 ['ENST00000489805.5_1_6:10411961-10412090:-|nuORF'] 35463 11707 GTEQCPPCAQC True H1975_Epitope_Rep2 1135.4096508077498 1135.40854993586 50.106 2 -1.0014984130577458 0.30258263080422854 1.0 ['ENST00000378052.5_1_7:148991082-148992133:+|nuORF', 'ENST00000480864.1_1_7:148991400-148992133:+|nuORF', 'ENST00000476295.5_1_7:148991497-148992133:+|nuORF', 'ENST00000481519.5_1_7:148990933-148994165:+|nuORF'] 28006 5951 FQWWRMDWTPR True NCI_RA007_Epitope_Rep1 1607.7455872528296 1607.74393490379 27.195 3 -1.0016051965704167 0.3026106271660445 1.0 ['ENST00000582986.5_1_17:62801160-62833227:-|nuORF', 'ENST00000430334.7_1_17:43555485-43568071:-|nuORF'] 117281 8580 VAAASAAC True NCI_RA007_Epitope_Rep2 662.3057607092201 662.30521496793 38.018 1 -1.001622799433957 0.3026106271660445 1.0 ['ENST00000378052.5_1_7:148991082-148992133:+|nuORF', 'ENST00000480864.1_1_7:148991400-148992133:+|nuORF', 'ENST00000476295.5_1_7:148991497-148992133:+|nuORF'] 136046 20685 YFSVAHFS True NCI_RA007_Epitope_Rep5 956.43921740692 956.43812993586 86.524 2 -1.0016869620656756 0.3026106271660445 1.0 ['ENST00000216024.6_1_22:38964257-38966082:-|nuORF'] 101444 832 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 4.6659 2 -1.001735223253434 0.30266010115877645 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 53171 16091 KSRTRWIHSQI True PC9_epitope_Rep1 1410.7844152896998 1410.7833099358602 66.711 2 -1.0017745792298425 0.3026694319930421 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|56|2|sense'] 22660 19456 ETSEKFKF True PC9_epitope_Rep4 1014.5022115862998 1014.50110993586 82.953 2 -1.0017990741972844 0.30267471265905777 1.0 ['ENST00000340589.4_1_4:89430402-89430654:-|nuORF'] 1146 10633 AEAPSPAPTP True H1975_Epitope_Rep3 936.4552613938799 936.45416993586 45.973 2 -1.001814216182595 0.30267471265905777 1.0 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB', 'ENST00000525051.5_1_8:144873596-144874681:-|nuORF'] 16948 9048 EGFGLSGS True NCI_RA007_Epitope_Rep5 752.33408363204 752.3335349679301 41.461 1 -1.0019071414779985 0.30268404292327866 1.0 ['ENST00000586759.1_1_19:2476166-2476346:+|nuORF'] 18937 6652 ELEVRRVRQAF True H1975_Epitope_Rep1 1401.78408093653 1401.78244490379 30.638 3 -1.001953740488246 0.3026852731432547 1.0 ['ENSG00000072210|ENST00000176643|ALDH3A2', 'nc|ENSG00000072210|P51648-2|ALDH3A2', 'ENST00000467473.5_1_17:19551570-19555957:+|nuORF'] 64345 16061 LQNRRLFQSLH True PC9_epitope_Rep3 1410.7844152896998 1410.7833099358602 66.929 2 -1.001957655861471 0.3026852731432547 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 16119 7925 EEEEEDEDDHS True NCI_RA007_Epitope_Rep1 1361.43789254573 1361.4367899358601 34.82 2 -1.0019650140283025 0.3026852731432547 1.0 ['FBXO3|p.D438H|1|0.42|ENSG00000110429|chr11:33742012-33742012|C/G|missense_variant'] 3532 4690 AGLVVPCQWGP True H1975_Epitope_Rep2 1125.5641006502099 1125.56300993586 23.135 2 -1.0020067676059579 0.3026946027668513 1.0 ['ENST00000283629.7_1_3:33481464-33481797:-|nuORF'] 33663 3786 GLPGPLHCC True PC9_epitope_Rep5 895.4044292046701 895.40332993586 19.647 2 -1.0021093579596292 0.3027306904994448 1.0 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF'] 68381 5961 LTSQTGWLPD True NCI_RA007_Epitope_Rep2 1116.54513902744 1116.5440499358601 27.796 2 -1.0021356718896168 0.3027359689611345 1.0 ['SVA_E_dup408|chr10:31969059-31970051:+|2.2329970574096665|0.275459818795955|3.02|498.0|35|3|anti-sense', 'chr15:60364523-60366446|150|115.17|0.14|9.65|-|1|TE_info:SVA_E,SVA_E_dup534,SVA,Retroposon,donor,+,60366446,60366898|ANXA2,None|1'] 130555 15050 VTYHPTEV True PC9_epitope_Rep1 944.46034677432 944.45924993586 62.707 2 -1.0021570839012728 0.3027359689611345 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 124706 6688 VLKERLDPET True H1975_Epitope_Rep1 1198.6557521055797 1198.65464993586 30.774 2 -1.0021933183144696 0.3027452974072191 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 71783 1497 MNLQNNEAGRR True NCI_RA007_Epitope_Rep1 1301.6258660429698 1301.62423490379 7.9041 3 -1.0022459977446168 0.30274652503712424 1.0 ['ENSG00000111186|ENST00000397196|WNT5B'] 37126 9874 GVSYVYFF True PC9_epitope_Rep2 980.4643695256 980.46326993586 43.315 2 -1.002250957611748 0.30274652503712424 1.0 ['SVA_C_dup26|chr1:153574460-153575981:+|1.9575035595213544|0.0744788955417672|4.72|476.0|68|3|anti-sense'] 99792 13185 SLGRHWAFTYK True NCI_RA007_Epitope_Rep2 1364.69895433024 1364.6978499358602 55.92 2 -1.0022595162164514 0.30274652503712424 1.0 ['ENST00000266069.4_1_20:61576630-61576744:+|nuORF'] 36328 7239 GVGVVGIIE True PC9_epitope_Rep1 841.49091862661 841.48982993586 32.658 2 -1.0023779155913433 0.30278260869565216 1.0 ['ENSG00000159256|ENST00000400485|MORC3'] 81686 2588 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 14.599 3 -1.002446410030161 0.30281869138874395 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 62301 21267 LLQQRLLL True PC9_epitope_Rep2 995.64915060351 995.64804993586 87.264 2 -1.0024755345683374 0.3028413955479452 1.0 ['ENST00000359486.7_2_22:42575622-42575670:-|nuORF', 'ENST00000204005.13_1_19:41129584-41129844:+|nuORF'] 74852 6404 NLQFHRFWSV True H1975_Epitope_Rep1 1332.6727395824 1332.6716499358602 29.692 2 -1.0025467604010008 0.3028774764892379 1.0 ['nc|ENSG00000158104|P32754-2|HPD', 'nc|ENSG00000158104|P32754|HPD', 'ENSG00000158104|ENST00000289004|HPD'] 114724 7974 TSTPQQLANL True H1975_Epitope_Rep2 1071.5560380643099 1071.5549499358601 35.619 2 -1.0025831001893648 0.3028786986997699 1.0 ['ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3'] 100585 10789 SLQEIWDYVIR True H1975_Epitope_Rep3 1420.73506505544 1420.7339699358602 46.58 2 -1.0026002921879344 0.3028786986997699 1.0 ['L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|83|2|sense'] 25745 13756 FFMNEQNR True PC9_epitope_Rep3 1084.4760139218 1084.47490993586 57.994 2 -1.002627096138876 0.3028786986997699 1.0 ['nc|ENSG00000157625|Q8N5C8-2|TAB3', 'ENSG00000157625|ENST00000288422|TAB3'] 128072 22880 VRRLPGGG True PC9_epitope_Rep3 810.4824196315798 810.48132993586 93.274 2 -1.0026599614439404 0.302888023863986 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 124074 26172 VKRRRCGTR True PC9_epitope_Rep1 1130.6567126787797 1130.6556099358602 106.0 2 -1.002806832103414 0.30293059401040623 1.0 ['ENST00000229633.6_1_6:126277992-126278139:+|nuORF'] 62763 14411 LMDDLLNKTRY True H1975_Epitope_Rep1 1380.70713605544 1380.7060299358602 60.629 2 -1.0028219059271821 0.30293059401040623 1.0 ['ENSG00000117971|ENST00000261751|CHRNB4', 'nc|ENSG00000117971|P30926-2|CHRNB4'] 93158 22463 RRRRPRLPA True PC9_epitope_Rep2 1176.74282526124 1176.7417299358601 91.893 2 -1.002824516424554 0.30293059401040623 1.0 ['nc|ENSG00000286025|P0DSO1|FAM246C'] 27473 9623 FNVKFYPAD True H1975_Epitope_Rep1 1099.53384606775 1099.53274993586 41.942 2 -1.0028325868349701 0.30293059401040623 1.0 ['EPB41L3|p.P191A|1|0.22|ENSG00000082397|chr18:5438069-5438069|G/C|missense_variant'] 33605 10955 GLLKQGLPPA True PC9_epitope_Rep5 992.6018660579198 992.60076993586 47.128 2 -1.0029239863246395 0.30293059401040623 1.0 ['nc|ENSG00000170037|Q8N137-5|CNTROB', 'ENSG00000170037|ENST00000563694|CNTROB', 'nc|ENSG00000170037|Q8N137-3|CNTROB', 'nc|ENSG00000170037|Q8N137-2|CNTROB', 'ENST00000576723.5_1_17:7843028-7852016:+|nuORF'] 79532 5934 PGRTSDSPW True PC9_epitope_Rep6 1001.4566583762099 1001.45556993586 31.117 2 -1.0029410771764744 0.30293059401040623 1.0 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant', 'ENST00000522327.1_1_8:103372297-103373424:-|nuORF'] 125092 26060 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 105.47 3 -1.0029941139658263 0.3029532930287304 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 35090 15542 GRLWLNTWCVP True PC9_epitope_Rep4 1343.68086173795 1343.6797699358601 67.706 2 -1.003168503546888 0.3029759914398448 1.0 ['ENST00000507493.1_1_4:515710-515999:+|nuORF'] 134303 9021 WRTWRELVPR True NCI_RA007_Epitope_Rep5 1397.76803694957 1397.76640490379 41.357 3 -1.0032132173269424 0.303013280905188 1.0 ['ENSG00000158113|ENST00000339777|LRRC43'] 97230 3486 SFLMKHKSRK True NCI_RA007_Epitope_Rep2 1260.7124962194 1260.71086490379 18.213 3 -1.0032540194596042 0.303013280905188 1.0 ['nc|ENSG00000104228|Q9UPQ4-2|TRIM35', 'ENSG00000104228|ENST00000305364|TRIM35'] 115320 9609 TVDRYQAP True PC9_epitope_Rep1 948.46649478392 948.46538993586 41.817 2 -1.0032832271066026 0.303013280905188 1.0 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 99334 13354 SLDRAASPVL True PC9_epitope_Rep2 1027.5662088251897 1027.5651099358602 56.639 2 -1.0032849705718572 0.303013280905188 1.0 ['ENSG00000111145|ENST00000228741|ELK3', 'ENST00000549529.1_1_12:96649292-96660955:+|nuORF'] 124787 14592 VLLAVDPQL True PC9_epitope_Rep2 966.57498260374 966.57388993586 61.397 2 -1.0033082184309376 0.3030226026481209 1.0 ['ENST00000460100.1_1_2:131103735-131103934:+|nuORF'] 88720 3850 RCVHKFTSSLP True NCI_RA007_Epitope_Rep2 1273.66012629337 1273.6584749037902 19.609 3 -1.0034061791514728 0.3030452983108424 1.0 ['ENST00000528393.1_1_11:79699709-79699943:+|nuORF'] 15920 10277 EDRRSREAGP True PC9_epitope_Rep3 1171.56939671267 1171.56828993586 44.479 2 -1.0034807979569536 0.3030558341691742 1.0 ['ENST00000404251.1_1_7:72856506-72856560:-|nuORF'] 41289 10537 IAGRRGKAKS True PC9_epitope_Rep5 1042.6359601508598 1042.63486993586 45.519 2 -1.0035300079518712 0.3030558341691742 1.0 ['ENST00000349736.9_1_20:463717-463870:-|nuORF'] 62302 20561 LLQQRLLL True PC9_epitope_Rep4 995.64915060351 995.64804993586 87.238 2 -1.003537513892316 0.3030558341691742 1.0 ['ENST00000359486.7_2_22:42575622-42575670:-|nuORF', 'ENST00000204005.13_1_19:41129584-41129844:+|nuORF'] 10226 14011 CFDPKEDRWSL True PC9_epitope_Rep4 1394.6288857347397 1394.6272349037902 61.806 3 -1.0035576198648857 0.3030558341691742 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 80845 15433 PLVAATAL True PC9_epitope_Rep4 754.45889022234 754.4583449679301 67.297 1 -1.003601945340243 0.30306515459505723 1.0 ['ENST00000441493.6_1_22:18271402-18271729:-|nuORF'] 71621 22570 MLLSKQFV True PC9_epitope_Rep2 964.5415743004801 964.54046993586 92.309 2 -1.0036178257262571 0.3030837946989756 1.0 ['ENSG00000137100|ENST00000259632|DCTN3', 'ENST00000481438.1_1_9:34613781-34613940:-|nuORF', 'ENST00000479399.5_1_9:34613781-34614146:-|nuORF', 'ENST00000472418.5_1_9:34613781-34614781:-|nuORF', 'nc|ENSG00000137100|O75935-3|DCTN3'] 3382 7435 AGITGTWY True H1975_Epitope_Rep3 867.4126683059098 867.41156993586 33.577 2 -1.0036325293679063 0.3030837946989756 1.0 ['CON__Streptavidin'] 128790 11373 VSRFWIFSQVP True NCI_RA007_Epitope_Rep2 1364.7241064489199 1364.72300993586 48.826 2 -1.0036460387496868 0.30309311437703096 1.0 ['ENSG00000160185|ENST00000319294|UBASH3A'] 231 19234 AAGAPNLVLAA True PC9_epitope_Rep2 966.5498304850599 966.54872993586 79.357 2 -1.0036614548725913 0.30309838060469907 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 114390 8447 TSDPLELQ True H1975_Epitope_Rep3 901.43927697657 901.43816993586 37.475 2 -1.0036620867649204 0.30309838060469907 1.0 ['ENST00000304045.6_1_19:51480794-51487328:-|nuORF'] 137349 21382 YLKEPMIV True PC9_epitope_Rep1 991.5412399473099 991.54014993586 87.078 2 -1.0036845600191293 0.3031076997138349 1.0 ['ENSG00000080007|ENST00000370336|DDX43'] 122733 9537 VGVCGWLVPP True NCI_RA007_Epitope_Rep3 1025.5368232732096 1025.5357299358602 44.601 2 -1.0037499574284459 0.30311296534017973 1.0 ['ENST00000519069.5_1_8:93933857-93978353:-|nuORF', 'ENST00000537541.1_2_8:93929192-93978353:-|nuORF', 'ENST00000522903.5_3_8:93972871-93978353:-|nuORF', 'ENST00000521988.5_2_8:93966716-93978353:-|nuORF'] 79716 17008 PHPSPFSRFPS True NCI_RA007_Epitope_Rep5 1254.61455599994 1254.6129149037902 72.183 3 -1.0038337545945568 0.30311296534017973 1.0 ['ERV3-1|p.A413Hfs*36|1|0.21|ENSG00000213462|chr7:64991790-64991790|C/-|frameshift_variant', 'ENSG00000213462|ENST00000394323|ERV3-1'] 122745 6530 VGVENPAP True PC9_epitope_Rep3 781.3970182417698 781.39592993586 30.145 2 -1.0038598817897344 0.3031182306848875 1.0 ['ENSG00000189325|ENST00000437635|BNIP5'] 34336 9213 GPSAQEKP True NCI_RA007_Epitope_Rep5 812.4028318981999 812.40172993586 42.089 2 -1.0039121393959056 0.3031182306848875 1.0 ['LIN28A|p.G186E|1|0.17|ENSG00000131914|chr1:26426385-26426385|G/A|missense_variant'] 93094 14274 RRRLPFIRMTL True PC9_epitope_Rep6 1457.8765418527296 1457.87488490379 66.795 3 -1.0039419358376738 0.30312754890555843 1.0 ['ENST00000262113.8_1_8:2026969-2037879:+|nuORF'] 109243 23192 TFWKEEKSF True PC9_epitope_Rep4 1200.5815245361598 1200.5804299358601 97.438 2 -1.0040130985485236 0.303132813649066 1.0 ['ENSG00000123171|ENST00000242819|CCDC70'] 61682 16385 LLHTQDVL True PC9_epitope_Rep3 937.5232813840499 937.52218993586 68.163 2 -1.0040228119202623 0.303132813649066 1.0 ['ENST00000488375.2_2_17:16220949-16229209:+|nuORF', 'ENSG00000108474|ENST00000225609|PIGL'] 42182 13167 IEGADAETFSE True H1975_Epitope_Rep3 1167.4931630242302 1167.4920699358602 55.897 2 -1.0040524971624174 0.3031380781110027 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 54697 12460 LAEESLPTTP True PC9_epitope_Rep5 1056.5339056374 1056.53280993586 52.927 2 -1.0040724777036731 0.3031380781110027 1.0 ['ENSG00000115368|ENST00000314761|WDR75', 'ENST00000436347.5_1_2:190313199-190340140:+|nuORF'] 109293 8853 TGEKPYECAK True H1975_Epitope_Rep1 1124.5172100274397 1124.5161099358602 38.975 2 -1.0041259414024963 0.30316076585731094 1.0 ['ZNF85|p.E457A|1|0.23|ENSG00000105750|chr19:20949884-20949884|A/C|missense_variant'] 96647 12714 SENLKIRKRTH True H1975_Epitope_Rep1 1380.7949799734 1380.79388993586 53.961 2 -1.0041604602267835 0.3031700827617558 1.0 ['ZIC3|p.H348R|1|0.33|ENSG00000156925|chrX:137567734-137567734|A/G|missense_variant'] 122241 8383 VGRQLMHKA True NCI_RA007_Epitope_Rep4 1038.5756683934198 1038.5745699358602 39.059 2 -1.004187624906016 0.30317939941706556 1.0 ['nc|ENSG00000158062|Q5T124-4|UBXN11', 'ENSG00000158062|ENST00000374222|UBXN11', 'nc|ENSG00000158062|Q5T124-3|UBXN11', 'nc|ENSG00000158062|Q5T124-8|UBXN11', 'nc|ENSG00000158062|Q5T124-2|UBXN11'] 86995 5801 QRWSWCRWWWT True NCI_RA007_Epitope_Rep1 1679.7568206428696 1679.75518490379 26.617 3 -1.0042155389761376 0.30318871582325024 1.0 ['ENST00000348956.6_1_14:103986274-103986647:-|nuORF'] 16380 21868 EELFLQTTFDK True NCI_RA007_Epitope_Rep1 1369.6765471198098 1369.6754499358601 89.528 2 -1.0042807597552321 0.30319397836811635 1.0 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant', 'ATM|p.Q1116Sfs*10|1|0.39|ENSG00000149311|chr11:108279550-108279550|T/-|frameshift_variant'] 110675 14502 TIWSLWQQ True PC9_epitope_Rep4 1060.53418042092 1060.53308993586 63.695 2 -1.0042863180777217 0.30319397836811635 1.0 ['nc|ENSG00000184619|Q6ZNG9|KRBA2'] 67795 20490 LTHRPWSL True PC9_epitope_Rep4 1008.5504991913999 1008.54940993586 86.964 2 -1.0043662992820666 0.30320329420572745 1.0 ['ENST00000563645.1_1_16:19514794-19516450:-|nuORF', 'ENSG00000006007|ENST00000353258|GDE1'] 59412 16539 LGLRRLRQRR True PC9_epitope_Rep1 1322.8483529589398 1322.8472499358602 68.44 2 -1.004407619534512 0.30320855614973263 1.0 ['ENSG00000171119|ENST00000303212|NRTN'] 38316 19036 HFRSRTIRTRR True NCI_RA007_Epitope_Rep5 1484.85489489136 1484.85378993586 80.079 2 -1.0044370927882509 0.30320855614973263 1.0 ['LPAR4|p.P143H|1|0.46|ENSG00000147145|chrX:78755297-78755297|C/A|missense_variant'] 100856 8501 SLSENRWHFLC True H1975_Epitope_Rep3 1390.6452045052197 1390.6441099358601 37.684 2 -1.004462023949903 0.3032632381054236 1.0 ['ENST00000581758.1_1_18:9182415-9208777:+|nuORF'] 46342 13577 ITGAFPPS True NCI_RA007_Epitope_Rep3 788.40685464948 788.40630496793 60.703 1 -1.0044745096080139 0.3032632381054236 1.0 ['ENST00000415522.1_1_X:22454332-22454536:+|nuORF'] 238 17390 AAGAPNLVLAA True PC9_epitope_Rep6 966.5498304850599 966.54872993586 79.505 2 -1.0044759948992736 0.3032632381054236 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 30907 7914 GASATQAQAW True PC9_epitope_Rep1 989.4566583762097 989.45556993586 35.267 2 -1.0046542637492601 0.30331265707716165 1.0 ['ENST00000491370.1_1_2:220435199-220436548:-|nuORF'] 99429 11672 SLEHAVHIIE True H1975_Epitope_Rep2 1146.6033226099 1146.6022299358601 49.969 2 -1.0046821019672414 0.30336207472762516 1.0 ['ENSG00000187764|ENST00000422704|SEMA4D', 'nc|ENSG00000187764|Q92854-2|SEMA4D'] 56152 11258 LDNHTEVVFIA True H1975_Epitope_Rep1 1256.6401020414398 1256.63900993586 48.28 2 -1.0046992759184652 0.3033725888596292 1.0 ['nc|ENSG00000115486|P38435-2|GGCX', 'ENSG00000115486|ENST00000233838|GGCX'] 58409 18860 LEVRNSKSI True H1975_Epitope_Rep3 1044.5927579262 1044.5916699358602 79.105 2 -1.0047340000267513 0.3033725888596292 1.0 ['nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1', 'nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1', 'NEO1|p.D1259Ifs*101|1|0.33|ENSG00000067141|chr15:73293422-73293422|G/-|frameshift_variant'] 20012 7975 EMLRTQSVA True PC9_epitope_Rep5 1033.52262976105 1033.5215299358601 35.615 2 -1.0047366253459833 0.3033725888596292 1.0 ['ENSG00000166685|ENST00000299886|COG1'] 80626 16214 PLPLITCCHLL True PC9_epitope_Rep4 1221.66137216333 1221.66026993586 70.311 2 -1.004744067263603 0.3033725888596292 1.0 ['ENST00000035307.6_1_7:150930587-150930716:+|nuORF'] 58080 27069 LERREKHEKRR True H1975_Epitope_Rep2 1535.8756899055895 1535.87404490379 111.73 3 -1.0048390748438603 0.303381900815399 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 89907 24714 RFRLTYLMR True NCI_RA007_Epitope_Rep1 1254.7019315357 1254.70027490379 102.33 3 -1.0049306005106349 0.30344062449874354 1.0 ['ENST00000475716.5_1_20:17934824-17937653:-|nuORF', 'ENST00000483485.5_1_20:17934679-17937653:-|nuORF'] 103448 18399 SRAFGGKG True H1975_Epitope_Rep3 778.4085859849798 778.40748993586 77.13 2 -1.0049506029676625 0.30344062449874354 1.0 ['nc|ENSG00000145730|P19021-6|PAM'] 92799 19976 RRLALLQWI True NCI_RA007_Epitope_Rep5 1167.72404687927 1167.72241490379 83.752 3 -1.0050382409346135 0.3034766684934437 1.0 ['ENSG00000142686|ENST00000270815|C1orf216'] 20626 8193 EQEYEKERS True H1975_Epitope_Rep1 1196.5309455152799 1196.52984993586 36.455 2 -1.0050627381903485 0.30349934504237175 1.0 ['PCSK1|p.Q102E|1|0.68|ENSG00000175426|chr5:96425912-96425912|G/C|missense_variant'] 119607 23316 VERVLRDLRI True PC9_epitope_Rep3 1267.77245362367 1267.7713499358601 94.964 2 -1.005082053905362 0.3035098505707183 1.0 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000583850.5_1_17:7127146-7127844:+|nuORF'] 82056 7650 PSVPIQDPE True PC9_epitope_Rep5 980.48147614172 980.48036993586 34.371 2 -1.0050884849009258 0.3035098505707183 1.0 ['TET3|p.G1454Afs*77|1|0.36|ENSG00000187605|chr2:74101148-74101148|G/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3', 'nc|ENSG00000187605|O43151-3|TET3', 'ENST00000475405.2_1_2:74274397-74300767:+|nuORF'] 82654 20873 PVLQEDHCDS True PC9_epitope_Rep3 1141.47098811101 1141.46988993586 85.56 2 -1.005105035367646 0.3035098505707183 1.0 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 118397 9113 VDLHVISNDVC True NCI_RA007_Epitope_Rep1 1212.58087291316 1212.5797699358602 39.449 2 -1.0051681050418415 0.3035098505707183 1.0 ['nc|ENSG00000142515|P07288-3|KLK3', 'nc|ENSG00000142515|P07288-5|KLK3', 'nc|ENSG00000142515|P07288-2|KLK3', 'ENSG00000142515|ENST00000326003|KLK3'] 30911 5797 GASCWSGFHII True NCI_RA007_Epitope_Rep4 1176.53861417836 1176.53750993586 28.921 2 -1.0051787935036454 0.3035191595717665 1.0 ['ENSG00000148331|ENST00000277458|ASB6'] 43218 11812 IGVSDLLL True H1975_Epitope_Rep2 828.49566965388 828.49456993586 50.512 2 -1.0052178169124422 0.303524411595675 1.0 ['OPA1|p.A196V|2|0.11|ENSG00000198836|chr3:193617814-193617814|C/T|missense_variant'] 139417 16268 YTEKEPAAMD True H1975_Epitope_Rep2 1153.49614022969 1153.4950499358602 67.787 2 -1.0052267325702733 0.303524411595675 1.0 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2'] 4984 13865 ALKEGHSVL True PC9_epitope_Rep5 952.5341804209199 952.53308993586 58.352 2 -1.0052642365312525 0.30357381518804627 1.0 ['nc|ENSG00000126217|O15068-4|MCF2L', 'nc|ENSG00000126217|O15068-3|MCF2L', 'nc|ENSG00000126217|O15068-2|MCF2L', 'nc|ENSG00000126217|O15068-6|MCF2L', 'nc|ENSG00000126217|O15068-8|MCF2L', 'nc|ENSG00000126217|O15068-10|MCF2L', 'ENSG00000126217|ENST00000535094|MCF2L', 'nc|ENSG00000126217|O15068|MCF2L', 'nc|ENSG00000126217|O15068-5|MCF2L', 'ENST00000464800.5_1_13:113718626-113724520:+|nuORF'] 126034 13350 VPAPSLSAP True PC9_epitope_Rep3 837.45961849833 837.4590749679301 56.385 1 -1.0053251389320321 0.30358312283656097 1.0 ['ENST00000294256.12_2_11:64895574-64895820:-|nuORF'] 80166 25135 PKVFLRKKR True PC9_epitope_Rep1 1170.7713314248597 1170.77022993586 101.56 2 -1.005365166572786 0.30359243023628785 1.0 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|64|3|sense'] 45516 8501 ISEYKEERIPK True H1975_Epitope_Rep3 1390.7456297391398 1390.74452993586 37.684 2 -1.0054873509701636 0.3036551954560642 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26'] 102538 11266 SQAHRNFLEDG True H1975_Epitope_Rep1 1272.58471242364 1272.58360993586 48.311 2 -1.0055996595957166 0.3037179589982092 1.0 ['ENSG00000116209|ENST00000234831|TMEM59'] 107792 8339 TANLQPQTL True H1975_Epitope_Rep2 984.52400966004 984.52290993586 37.028 2 -1.0056772855327987 0.303749933180093 1.0 ['ENSG00000177853|ENST00000316045|ZNF518A', 'ZNF518A|p.L1107Ffs*8|1|0.21|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant'] 96710 12563 SEQDFQYLRQK True NCI_RA007_Epitope_Rep2 1440.69974217588 1440.6986499358602 53.482 2 -1.005746062549693 0.303749933180093 1.0 ['ENSG00000135587|ENST00000258052|SMPD2'] 120749 10581 VGAVQHVL True PC9_epitope_Rep5 821.47593726881 821.47484993586 45.688 2 -1.0058227244292128 0.30378190565281304 1.0 ['ENST00000451055.6_1_3:122632522-122634295:-|nuORF'] 10854 7876 DALGSLTHSGR True H1975_Epitope_Rep3 1112.55743504664 1112.55632993586 35.271 2 -1.005841085640377 0.30378190565281304 1.0 ['ACTN4|p.R512G|1|0.28|ENSG00000130402|chr19:38723705-38723705|C/G|missense_variant'] 122940 10096 VGVVRKYL True PC9_epitope_Rep6 932.5807366905199 932.5801849679301 49.44 1 -1.0058633731675526 0.30379120952546407 1.0 ['nc|ENSG00000214279|Q4G0T1-2|SCART1', 'ENST00000482993.6_3_10:135267501-135271093:+|nuORF', 'nc|ENSG00000214279|Q4G0T1-3|SCART1', 'ENSG00000214279|ENST00000640237|SCART1'] 11266 3903 DERFRYESDFD True NCI_RA007_Epitope_Rep2 1477.6109867411299 1477.60933490379 19.816 3 -1.0059031212284315 0.3038098165247952 1.0 ['nc|ENSG00000104218|Q1MSJ5-1|CSPP1', 'ENSG00000104218|ENST00000678616|CSPP1', 'nc|ENSG00000104218|Q1MSJ5|CSPP1', 'nc|ENSG00000104218|Q1MSJ5-2|CSPP1'] 11317 6544 DEVERRWDLRC True H1975_Epitope_Rep1 1475.6939456027899 1475.69284993586 30.229 2 -1.0059140175860173 0.3038098165247952 1.0 ['DENND2B|p.R819Wfs*38|2|0.18|ENSG00000166444|chr11:8707200-8707201|CG/-|frameshift_variant'] 124049 17184 VKQLRSHNVP True H1975_Epitope_Rep2 1176.6727395824 1176.6716499358602 71.388 2 -1.005947463671221 0.30383248256140255 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'ENST00000488988.5_1_3:52422617-52433783:+|nuORF', 'ENST00000486752.5_1_3:52422617-52434459:+|nuORF'] 91329 27142 RMKKKKKLLPF True PC9_epitope_Rep3 1415.91628140639 1415.91463490379 111.67 3 -1.0059759189395936 0.3038417852609073 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 129386 16545 VTEFYLLGFGA True PC9_epitope_Rep5 1215.6175756917098 1215.61646993586 68.643 2 -1.0059926179193146 0.3038575112571986 1.0 ['ENSG00000181273|ENST00000326855|OR5AK2'] 73704 9973 NGSISLAVP True PC9_epitope_Rep3 856.4654321547599 856.46432993586 43.317 2 -1.0060074218716104 0.3038575112571986 1.0 ['ENSG00000185565|ENST00000490035|LSAMP'] 126232 17848 VPGVLAVAP True PC9_epitope_Rep5 821.50108938749 821.5005449679301 73.671 1 -1.0060195871714603 0.3038575112571986 1.0 ['ENST00000337304.2_1_22:39916921-39917209:+|nuORF'] 11491 21011 DGFFAVKHAR True H1975_Epitope_Rep2 1146.5934266325396 1146.59179490379 86.972 3 -1.0060243140406948 0.3038575112571986 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5'] 80517 23502 PLLLTWRFRR True PC9_epitope_Rep4 1356.814258866 1356.81316993586 98.704 2 -1.006024472051324 0.3038575112571986 1.0 ['ENST00000273062.6_1_2:219270400-219270469:+|nuORF'] 36535 5401 GVKTENND True PC9_epitope_Rep3 875.39847479375 875.39736993586 25.847 2 -1.0060808873528795 0.3038575112571986 1.0 ['nc|ENSG00000188612|P61956-2|SUMO2', 'ENSG00000188612|ENST00000420826|SUMO2'] 76730 23175 NTQISLSLYF True PC9_epitope_Rep4 1184.607739284 1184.60664993586 97.372 2 -1.00609627568158 0.30386681275219796 1.0 ['ENST00000428388.6_1_6:32135933-32136035:+|nuORF'] 108119 6133 TDNGPGYC True NCI_RA007_Epitope_Rep3 825.29631822433 825.29522993586 31.113 2 -1.0061053999126253 0.30387205387205385 1.0 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG832|P63136|ERVK-25_pol', 'nc|ENSG801|P63132|HERVK_113_pro', 'HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|36|1|sense', 'nc|ENSG826|Q9BXR3|ERVK-6_gag', 'nc|ENSG853|Q9UQG0|ERVK-11', 'nc|ENSG855|P10266|ERVK-10_pol', 'nc|ENSG851|Q9QC07|ERVK-18_pol', 'nc|ENSG844|Q9WJR5|ERVK-19_pol', 'nc|ENSG814|P63133|ERVK-8_pol'] 10508 19397 CNYDGGDC True NCI_RA007_Epitope_Rep4 845.23200371561 845.2314549679301 83.878 1 -1.0061128912933959 0.30387205387205385 1.0 ['ENSG00000182752|ENST00000328252|PAPPA', 'ENST00000483254.1_1_9:119135964-119158892:+|nuORF'] 15958 3073 EDTRTQQTRR True NCI_RA007_Epitope_Rep3 1289.6436242820898 1289.64196490379 17.181 3 -1.0061505346668542 0.3039307377815782 1.0 ['ENSG00000010327|ENST00000321725|STAB1', 'STAB1|p.C740Mfs*9|1|0.15|ENSG00000010327|chr3:52508341-52508342|-/A|frameshift_variant', 'nc|ENSG00000010327|Q9NY15-2|STAB1', 'ENST00000481607.1_1_3:52529402-52542549:+|nuORF'] 79973 15536 PITVNRVTV True PC9_epitope_Rep5 997.59202965021 997.59092993586 64.769 2 -1.0061513200891246 0.3039307377815782 1.0 ['ENST00000377415.3_9:70394269-70394752:-|nuORF'] 64039 6709 LQDGAAPTP True H1975_Epitope_Rep3 868.42904664604 868.4284949679301 30.761 1 -1.006219232623466 0.3039400376768608 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 100885 17199 SLSHLSQGE True PC9_epitope_Rep4 956.4563240230399 956.45522993586 74.162 2 -1.006287538342487 0.3039586367219335 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 46034 8144 ISVPAPVAAAA True H1975_Epitope_Rep3 965.5545815123298 965.5540349679301 36.303 1 -1.0063045306871743 0.3039586367219335 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 31042 7536 GAVPTEGAV True NCI_RA007_Epitope_Rep3 799.4075829254699 799.40648993586 36.765 2 -1.0063316126507276 0.3039679358717435 1.0 ['ENST00000452733.6_1_19:48972489-48972630:+|nuORF'] 82733 14749 PVPTRVYKRV True PC9_epitope_Rep4 1213.7295261825298 1213.72789490379 64.665 3 -1.006342149855605 0.30397317372949284 1.0 ['ENST00000520704.1_1_8:43028977-43029178:+|nuORF'] 126108 3565 VPEDRGHQ True NCI_RA007_Epitope_Rep4 936.44134266524 936.44024993586 19.733 2 -1.0063663614924625 0.30397317372949284 1.0 ['ENST00000255641.12_1_19:1979231-1979554:+|nuORF'] 91330 27219 RMKKKKKLLPF True PC9_epitope_Rep3 1415.91628140639 1415.91463490379 112.02 3 -1.0064221693166968 0.3040184893258877 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 62622 5924 LLVNDTAA True PC9_epitope_Rep2 815.43888305375 815.43778993586 28.178 2 -1.0064767304012787 0.3040184893258877 1.0 ['nc|ENSG00000239474|O60662-2|KLHL41', 'ENSG00000239474|ENST00000284669|KLHL41'] 25779 20372 FFTVIFQWLKV True PC9_epitope_Rep3 1426.80129414046 1426.80018993586 83.612 2 -1.0065126049993334 0.3040237255530619 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 122900 19264 VGVRRRGNVRT True PC9_epitope_Rep6 1268.7537838677597 1268.7526899358602 86.749 2 -1.0065269964258967 0.3040237255530619 1.0 ['ENSG00000101265|ENST00000379400|RASSF2', 'nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 371 23032 AALAWRRAPE True H1975_Epitope_Rep1 1139.6199757335498 1139.6188699358602 95.783 2 -1.006536339038016 0.30403302296378426 1.0 ['ENST00000295878.7_1_3:113729745-113729820:-|nuORF'] 81871 8429 PSKYRKRECIS True NCI_RA007_Epitope_Rep3 1365.7187037986498 1365.71760993586 40.243 2 -1.0065392701142077 0.3040382585928212 1.0 ['ENST00000569150.1_1_16:25251139-25264321:-|nuORF', 'ENSG00000155592|ENST00000328086|ZKSCAN2'] 230 19570 AAGAPNLVLAA True PC9_epitope_Rep1 966.5498304850599 966.54928496793 80.101 1 -1.0065415708012884 0.3040382585928212 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 140219 14581 YWKVMLKA True PC9_epitope_Rep5 1037.5732087819297 1037.57210993586 61.087 2 -1.006585557786725 0.3040394325559029 1.0 ['ENST00000368331.5_1_1:155784176-155785627:-|nuORF'] 56549 19956 LDVLKSLNFRI True PC9_epitope_Rep3 1316.78162132504 1316.7805299358602 82.005 2 -1.006636221174975 0.3040394325559029 1.0 ['ENSG00000176563|ENST00000588408|CNTD1'] 65246 9048 LSEFEKNK True H1975_Epitope_Rep1 993.51311062317 993.51200993586 39.711 2 -1.006702050936161 0.3040394325559029 1.0 ['SOHLH2|p.L204Sfs*18|1|0.11|ENSG00000120669|chr13:36189976-36189977|AG/-|frameshift_variant', 'nc|ENSG00000120669|Q9NX45-2|SOHLH2', 'ENSG00000120669|ENST00000379881|SOHLH2', 'nc|ENSG00000120669|Q9NX45-3|SOHLH2'] 20802 4916 EQNQQCLREEQ True H1975_Epitope_Rep3 1403.6099411953098 1403.60884993586 24.037 2 -1.0067167720570667 0.3040539638015094 1.0 ['EVC2|p.H1088N|1|0.58|ENSG00000173040|chr4:5576250-5576250|G/T|missense_variant'] 45872 11202 ISQNSLTKIVP True H1975_Epitope_Rep1 1198.6921376143 1198.69104993586 48.057 2 -1.0067207124643816 0.3040539638015094 1.0 ['nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF'] 22711 5151 ETWDWFSWLFL True H1975_Epitope_Rep1 1528.7027022979998 1528.70104490379 24.88 3 -1.0067289290484591 0.3040539638015094 1.0 ['ENSG00000026508|ENST00000428726|CD44', 'nc|ENSG00000026508|P16070-9|CD44', 'nc|ENSG00000026508|P16070-5|CD44', 'nc|ENSG00000026508|P16070-7|CD44', 'nc|ENSG00000026508|P16070-3|CD44', 'nc|ENSG00000026508|P16070-6|CD44', 'nc|ENSG00000026508|P16070-16|CD44', 'nc|ENSG00000026508|P16070-17|CD44', 'nc|ENSG00000026508|P16070-8|CD44'] 128985 14955 VSVYLRDL True PC9_epitope_Rep2 963.5389314481899 963.53782993586 62.784 2 -1.006747163817925 0.3040632596906473 1.0 ['ENSG00000160753|ENST00000368352|RUSC1', 'nc|ENSG00000160753|Q9BVN2-4|RUSC1'] 117264 4695 VAAAALAR True NCI_RA007_Epitope_Rep5 741.44972252097 741.44917496793 24.745 1 -1.0067926178668876 0.3040644325421737 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 43812 3861 IKKVKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 21.056 3 -1.0068414841611866 0.3040644325421737 1.0 ['ENSG00000187257|ENST00000334955|RSBN1L'] 31759 6439 GELHAKVPS True H1975_Epitope_Rep3 936.50288029264 936.50178993586 29.745 2 -1.0068598612544413 0.3040644325421737 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant', 'KMT2D|p.A3440Vfs*11|1|0.21|ENSG00000167548|chr12:49034848-49034848|G/-|frameshift_variant', 'KMT2D|p.Q3370Pfs*53|2|0.24|ENSG00000167548|chr12:49037247-49037248|-/G|frameshift_variant', 'KMT2D|p.V3089Wfs*30|1|0.39|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant', 'KMT2D|p.R3082Gfs*14|1|0.2|ENSG00000167548|chr12:49038108-49038112|TCCCG/-|frameshift_variant', 'KMT2D|p.R2687Qfs*4|1|0.4|ENSG00000167548|chr12:49039604-49039604|C/-|frameshift_variant', 'KMT2D|p.S2590Wfs*56|1|0.29|ENSG00000167548|chr12:49039976-49040001|GCTGCTGGGCCCCAGGGGGCTGCCCG/-|frameshift_variant', 'KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant'] 6549 7967 APVMARWPPF True H1975_Epitope_Rep1 1170.6008205121 1170.59972993586 35.594 2 -1.0069062177396746 0.3040737277948444 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.P307Rfs*57|1|0.2|ENSG00000198753|chrX:153767746-153767747|-/G|frameshift_variant'] 116300 15200 TVVVLQKLN True PC9_epitope_Rep2 1012.62808080576 1012.62698993586 63.728 2 -1.0069189170700816 0.3040841947805647 1.0 ['nc|ENSG00000122482|Q9H582-2|ZNF644', 'ENSG00000122482|ENST00000337393|ZNF644'] 82929 6408 PWLCAPAP True H1975_Epitope_Rep2 853.4156455113699 853.41509496793 29.572 1 -1.0069428029573892 0.3040841947805647 1.0 ['ENST00000530134.5_1_1:32205534-32221699:-|nuORF'] 69383 13512 LVQHVQFIF True PC9_epitope_Rep4 1129.6284151589298 1129.62676490379 59.871 3 -1.0069430371435983 0.3040841947805647 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'ENST00000462984.1_1_X:70346235-70347318:+|nuORF'] 4533 21321 AKQIVKDVL True PC9_epitope_Rep5 1012.6280808057599 1012.62698993586 87.066 2 -1.0069439041762598 0.3040841947805647 1.0 ['ENSG00000168280|ENST00000435030|KIF5C', 'KIF5C|p.D290Tfs*29|1|0.17|ENSG00000168280|chr2:148950361-148950361|G/-|frameshift_variant'] 14584 9332 DVGRRRKH True H1975_Epitope_Rep3 1022.5845932843399 1022.5840749679301 40.892 1 -1.0070058812590064 0.3041347258206683 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 115786 23697 TVLVHLEIKVL True NCI_RA007_Epitope_Rep4 1262.79620876002 1262.7951099358602 102.77 2 -1.0070282023557628 0.3041347258206683 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 58861 8410 LFSEVILFQLW True NCI_RA007_Epitope_Rep1 1393.7645742785699 1393.76293490379 36.715 3 -1.0070322664610445 0.3041347258206683 1.0 ['ENST00000497194.6_1_11:71713256-71713580:+|nuORF'] 14292 8550 DTARPILPRP True H1975_Epitope_Rep3 1134.6509415086598 1134.6498499358602 37.877 2 -1.0070458345590931 0.3041347258206683 1.0 ['NCOR2|p.V1095I|1|0.17|ENSG00000196498|chr12:124355530-124355530|C/T|missense_variant'] 92937 1731 RRPMLWPLW True NCI_RA007_Epitope_Rep1 1253.6855531955698 1253.68390490379 9.1547 3 -1.0071133258073621 0.3041573738965531 1.0 ['ENST00000532433.5_1_1:212965321-212969949:+|nuORF', 'ENST00000366974.8_1_1:212965321-212970536:+|nuORF'] 599 7749 AASCEVDPS True H1975_Epitope_Rep2 877.3487477200099 877.34764993586 34.76 2 -1.0071239598848343 0.30416260466607015 1.0 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 20934 11317 EQVPSGPGFGE True H1975_Epitope_Rep2 1102.4931034545796 1102.49200993586 48.578 2 -1.007135007735722 0.30416260466607015 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 105983 4906 SVLKDAEK True NCI_RA007_Epitope_Rep2 888.4916469025999 888.49054993586 23.705 2 -1.0071616550448437 0.30416377330270816 1.0 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 37249 16988 GVVFWYKRRV True NCI_RA007_Epitope_Rep3 1308.7455105998397 1308.7444099358602 74.683 2 -1.0071776156940757 0.30416377330270816 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 101440 563 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 3.1624 2 -1.0071828114886714 0.30416377330270816 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 74443 8417 NIYPWNKELY True H1975_Epitope_Rep2 1338.6608374860198 1338.6597499358602 37.331 2 -1.0072237825866333 0.30417829529824936 1.0 ['nc|ENSG00000185973|Q9NVH6-7|TMLHE', 'nc|ENSG00000185973|Q9NVH6-6|TMLHE', 'nc|ENSG00000185973|Q9NVH6-5|TMLHE', 'ENSG00000185973|ENST00000334398|TMLHE', 'nc|ENSG00000185973|Q9NVH6-8|TMLHE', 'nc|ENSG00000185973|Q9NVH6-4|TMLHE', 'nc|ENSG00000185973|Q9NVH6-2|TMLHE', 'nc|ENSG00000185973|Q9NVH6-3|TMLHE'] 10557 11555 CQIKFVLHTD True NCI_RA007_Epitope_Rep5 1202.6117791186198 1202.6112749679298 51.096 1 -1.00723006026316 0.30417829529824936 1.0 ['SCUBE3|p.H224Q|1|0.28|ENSG00000146197|chr6:35233261-35233261|T/A|missense_variant'] 65942 11463 LSLLPGEEE True PC9_epitope_Rep3 985.49679185269 985.49568993586 49.091 2 -1.0072302119385907 0.30417829529824936 1.0 ['SP140|p.G385E|1|0.16|ENSG00000079263|chr2:230253412-230253412|G/A|missense_variant'] 63402 11094 LPGIHVSA True PC9_epitope_Rep1 792.4493881678 792.44828993586 47.56 2 -1.0073208205765563 0.3042009400705053 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 122329 12318 VGRWSLQRTRE True NCI_RA007_Epitope_Rep2 1386.7480297809796 1386.7469299358602 52.518 2 -1.0073263656373816 0.30420616904793696 1.0 ['ENST00000565149.5_1_16:88718476-88718593:-|nuORF'] 108123 4060 TDPAMEPRFKV True H1975_Epitope_Rep2 1289.6438075228898 1289.64217490379 20.703 3 -1.0073420506086244 0.30420616904793696 1.0 ['ENSG00000103089|ENST00000219368|FA2H'] 60453 20295 LILIFEWWYFR True H1975_Epitope_Rep3 1584.8493069620401 1584.84820993586 84.869 2 -1.0073987839158742 0.3042288125408928 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF', 'nc|ENSG00000004866|Q9NRC1-5|ST7', 'nc|ENSG00000004866|Q9NRC1-3|ST7', 'nc|ENSG00000004866|Q9NRC1-2|ST7', 'nc|ENSG00000004866|Q9NRC1-7|ST7', 'nc|ENSG00000004866|Q9NRC1-6|ST7'] 10390 21812 CKYQIEVLTS True PC9_epitope_Rep6 1182.5954603481398 1182.59380490379 96.801 3 -1.0074372597634038 0.30425145542915133 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 74476 19982 NKIYVFFQHAF True PC9_epitope_Rep5 1412.72410644892 1412.72245490379 81.914 3 -1.0076327069184507 0.30435421200913304 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 137762 23343 YNPVQILGYLF True PC9_epitope_Rep2 1325.70197402201 1325.70086993586 95.264 2 -1.0076900715956423 0.30436350041391835 1.0 115559 7330 TVHVITTTQK True H1975_Epitope_Rep1 1126.6346227381798 1126.63352993586 33.204 2 -1.0078042845092279 0.30445290072768544 1.0 ['ENST00000423411.2_1_6:135940529-135940997:-|nuORF'] 77195 18951 NYGQYFTLW True NCI_RA007_Epitope_Rep3 1190.53965972418 1190.53907496793 82.828 1 -1.007810984286171 0.30446218756675925 1.0 ['ENSG00000109929|ENST00000264027|SC5D'] 55304 19229 LARLTKEERLK True NCI_RA007_Epitope_Rep3 1355.8248831193498 1355.82322490379 83.945 3 -1.0078341804292994 0.3044714741578434 1.0 ['ENSG00000069535|ENST00000378069|MAOB', 'nc|ENSG00000069535|P27338-2|MAOB'] 77767 6796 PAATPSAPAA True PC9_epitope_Rep5 852.4341320264798 852.43302993586 31.112 2 -1.0078661133055244 0.30448076050094797 1.0 ['nc|ENSG00000100354|Q9UPQ9-2|TNRC6B', 'nc|ENSG00000100354|Q9UPQ9-1|TNRC6B', 'ENSG00000100354|ENST00000454349|TNRC6B'] 139035 14521 YSIRTPKTSVK True H1975_Epitope_Rep1 1278.7295857521801 1278.7284899358601 61.058 2 -1.00789329328423 0.30448191612929065 1.0 ['ENST00000567451.1_1_16:19559765-19562567:+|nuORF'] 37077 11806 GVSISEERQSL True PC9_epitope_Rep6 1203.6095301891498 1203.60787490379 56.603 3 -1.0079018416893828 0.30448191612929065 1.0 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 134098 11434 WQWLKHCEDPV True H1975_Epitope_Rep3 1439.6656055966298 1439.66450993586 49.1 2 -1.0079314416771714 0.30448191612929065 1.0 ['nc|ENSG00000162714|Q96IT1-2|ZNF496', 'ENSG00000162714|ENST00000682384|ZNF496'] 42640 14320 IETQAVRAEL True PC9_epitope_Rep1 1128.6138872935999 1128.61278993586 59.905 2 -1.0079697231904434 0.3044830716650646 1.0 ['nc|ENSG00000184465|A2RRH5|WDR27', 'ENST00000496752.1_1_6:170065563-170070787:-|nuORF'] 103460 17238 SRALDVPLL True PC9_epitope_Rep6 982.58113061334 982.58002993586 78.904 2 -1.0079803125207525 0.3044830716650646 1.0 ['ENST00000460343.5_1_3:53260493-53260973:-|nuORF'] 59344 12239 LGKFEKNV True PC9_epitope_Rep4 933.5283667644899 933.52726993586 54.895 2 -1.0079927835844682 0.3044830716650646 1.0 ['ENSG00000147488|ENST00000689386|ST18'] 52566 17079 KPTSTYSL True PC9_epitope_Rep3 895.46509780159 895.46400993586 70.846 2 -1.0080704341654376 0.30450570722915693 1.0 ['ENST00000553691.5_1_14:77907431-77919723:-|nuORF', 'VIPAS39|p.H309Ifs*2|1|0.36|ENSG00000151445|chr14:77435381-77435381|G/-|frameshift_variant', 'ENSG00000151445|ENST00000557658|VIPAS39'] 91326 24848 RMKKIKRQ True PC9_epitope_Rep2 1086.6808021682998 1086.67970993586 101.26 2 -1.0080911556147907 0.3045149921234614 1.0 ['ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'ENST00000428400.5_1_X:47082893-47085639:+|nuORF', 'ENSG00000102225|ENST00000357227|CDK16', 'nc|ENSG00000102225|Q00536-3|CDK16', 'nc|ENSG00000102225|Q00536-2|CDK16'] 121776 3534 VGMIHKAA True NCI_RA007_Epitope_Rep1 825.4530936492499 825.45198993586 17.669 2 -1.0081120661306144 0.30452427676986127 1.0 ['ENST00000521663.1_1_8:58192902-58193274:+|nuORF'] 33720 9035 GLREYHSV True PC9_epitope_Rep3 959.4824792012299 959.48138993586 39.695 2 -1.0081413993623016 0.30453356116836655 1.0 ['nc|ENSG00000198010|Q9P1A6-3|DLGAP2', 'nc|ENSG00000198010|Q9P1A6-2|DLGAP2', 'nc|ENSG00000198010|Q9P1A6|DLGAP2', 'ENSG00000198010|ENST00000637795|DLGAP2', 'DLGAP2|p.V756Cfs*63|1|0.37|ENSG00000198010|chr8:1676593-1676593|G/-|frameshift_variant'] 119887 14190 VEVVEETI True PC9_epitope_Rep5 916.4753281321199 916.47422993586 59.589 2 -1.00814932012988 0.304542845318987 1.0 ['CDKAL1-ASH1L|1|fusion', 'CDKAL1|p.P367Lfs*12|1|0.29|ENSG00000145996|chr6:21065091-21065091|C/-|frameshift_variant', 'ENSG00000145996|ENST00000274695|CDKAL1', 'nc|ENSG00000145996|Q5VV42-2|CDKAL1'] 114969 16766 TTIPRCSPV True PC9_epitope_Rep5 972.50625142092 972.50514993586 69.495 2 -1.0081636862168726 0.3045654785742892 1.0 ['ENST00000504445.1_1_4:47514609-47514774:+|nuORF'] 33807 11524 GLTLKVFFTKA True PC9_epitope_Rep6 1223.7277948470298 1223.72614490379 55.411 3 -1.0082343334278125 0.3045851965560969 1.0 ['nc|ENSG00000183780|Q8IY50|SLC35F3', 'ENSG00000183780|ENST00000366618|SLC35F3'] 90373 4182 RIKEMKQMHP True H1975_Epitope_Rep3 1296.6794818389599 1296.67783490379 21.205 3 -1.008242824568241 0.3045851965560969 1.0 ['ENSG00000180071|ENST00000399703|ANKRD18A', 'ENSG00000230453|ENST00000684830|ANKRD18B', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B'] 135383 24002 YDLKQNSFFGD True PC9_epitope_Rep3 1332.59863115228 1332.5969849037901 97.611 3 -1.0082497589294626 0.3045851965560969 1.0 ['ENST00000459719.6_1_Y:21751496-21752137:+|nuORF'] 139712 20906 YTVQSLETDL True PC9_epitope_Rep6 1167.5659340416698 1167.5648299358602 93.187 2 -1.0082505598556315 0.3045851965560969 1.0 ['ENST00000565278.1_1_16:72763309-72763579:+|nuORF'] 30050 9972 FYKLRKRKR True NCI_RA007_Epitope_Rep4 1293.8145932191699 1293.8129549037901 45.2 3 -1.0082522034144197 0.3045851965560969 1.0 ['ENST00000331314.10_1_1:200635381-200635528:-|nuORF'] 32644 24717 GHGYLGIL True PC9_epitope_Rep3 828.4493881678 828.44828993586 100.45 2 -1.0082539411903049 0.30459041339081916 1.0 ['DAGLA|p.R60H|1|0.3|ENSG00000134780|chr11:61720762-61720762|G/A|missense_variant'] 115310 3936 TVDPVTNQ True NCI_RA007_Epitope_Rep2 872.4239612656002 872.42286993586 19.946 2 -1.0083170581508052 0.30459041339081916 1.0 ['ENSG00000004799|ENST00000005178|PDK4', 'PDK4|p.C145R|1|0.39|ENSG00000004799|chr7:95592856-95592856|A/G|missense_variant'] 89956 939 RGAGSKRKRR True H1975_Epitope_Rep3 1170.71700443622 1170.71536490379 5.0975 3 -1.0083675956686704 0.30463160704751735 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 102743 11018 SQEEHQDFLQF True H1975_Epitope_Rep2 1406.61025846514 1406.60916993586 47.409 2 -1.0084035799599493 0.30463160704751735 1.0 ['ENSG00000172215|ENST00000304552|CXCR6'] 58428 8346 LEVYQELSDLP True H1975_Epitope_Rep1 1304.6499980187998 1304.64890993586 37.034 2 -1.0084099425714188 0.30463160704751735 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 19370 4159 ELNKPPLGP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 21.096 2 -1.0084279645570524 0.3046542357950374 1.0 ['ENST00000265085.9_1_5:173315710-173315878:+|nuORF'] 34189 25732 GPGPGGGR True H1975_Epitope_Rep2 653.32452200785 653.3239749679301 105.65 1 -1.0084817411867568 0.304676863938496 1.0 ['ENSG00000125878|ENST00000246080|TCF15'] 129593 7679 VTGNVPLK True NCI_RA007_Epitope_Rep1 826.4912529797799 826.49014993586 33.862 2 -1.0085469215102458 0.30468207783887674 1.0 ['ENSG00000169551|ENST00000276241|CT55', 'nc|ENSG00000169551|Q8WUE5-2|CT55'] 61425 10366 LLESDYFRYYK True H1975_Epitope_Rep1 1495.7347307022699 1495.73362993586 44.821 2 -1.0085486596424715 0.30468207783887674 1.0 ['ENSG00000197930|ENST00000395686|ERO1A'] 119523 4847 VEQVIEGQK True NCI_RA007_Epitope_Rep2 1028.5502244078796 1028.54912993586 23.478 2 -1.0086102032885853 0.3046913580246914 1.0 ['ENSG00000206113|ENST00000635017|CFAP99'] 42529 15036 IERWTKEKTEP True NCI_RA007_Epitope_Rep1 1415.7408787118698 1415.73978993586 62.554 2 -1.0086457672941316 0.30473661030069266 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1'] 117695 24654 VAKRTLGG True PC9_epitope_Rep4 800.4868363056798 800.48572993586 103.32 2 -1.0086918806740668 0.30473661030069266 1.0 ['ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 48018 6238 KAKKEHER True PC9_epitope_Rep5 1024.5777765683997 1024.57666993586 28.974 2 -1.0088794435149373 0.3048259662609438 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 25008 59 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 0.34437 2 -1.0089200968642844 0.3048485899985319 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 97298 6585 SFRSESRP True NCI_RA007_Epitope_Rep4 964.47264279352 964.47154993586 31.955 2 -1.0090313578194994 0.30499132523688777 1.0 ['ENSG00000163947|ENST00000296315|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-3|ARHGEF3', 'nc|ENSG00000163947|Q9NR81-2|ARHGEF3'] 115980 20042 TVQLSKPSL True PC9_epitope_Rep2 971.5651461960299 971.56404993586 82.496 2 -1.009069648973869 0.30500173486001014 1.0 ['PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion', 'nc|ENSG00000135365|Q96BD5-2|PHF21A', 'nc|ENSG00000135365|Q96BD5|PHF21A', 'ENSG00000135365|ENST00000676320|PHF21A', 'ENST00000527753.5_1_11:45959861-45986961:-|nuORF', 'ENST00000527401.5_1_11:45957138-45987102:-|nuORF'] 139054 20527 YSKYYPLI True NCI_RA007_Epitope_Rep3 1045.54843350273 1045.54732993586 89.42 2 -1.0090736492399421 0.30500173486001014 1.0 ['ENSG00000187242|ENST00000251643|KRT12', 'CON__Q99456'] 3668 12599 AGRISYHQVP True PC9_epitope_Rep5 1126.5883412521 1126.5872499358602 53.462 2 -1.0091200796243653 0.30500173486001014 1.0 ['ENST00000463473.2_1_1:207087354-207095257:-|nuORF'] 55853 10383 LDFEKIMHTRK True NCI_RA007_Epitope_Rep1 1416.7547549541998 1416.75364993586 44.372 2 -1.0091275418137413 0.30500173486001014 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1'] 37844 3213 HDPHVRHTWK True NCI_RA007_Epitope_Rep1 1311.65848650059 1311.65738993586 16.39 2 -1.0091425955710607 0.3050110095416027 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'nc|ENSG00000221866|Q9HCM2-4|PLXNA4'] 125379 6535 VLSTDYANSYR True NCI_RA007_Epitope_Rep2 1287.60953018915 1287.6084299358602 30.031 2 -1.0091587399402522 0.30503362869648765 1.0 ['ENSG00000138161|ENST00000392790|CUZD1'] 79053 10856 PFRIWHSP True PC9_epitope_Rep3 1038.5399345076999 1038.5388299358601 46.734 2 -1.0092339166555495 0.30504290270493883 1.0 ['ENST00000475374.5_1_X:78207700-78207754:+|nuORF'] 135356 11373 YDERWKEKQEQ True H1975_Epitope_Rep3 1537.7161205160098 1537.71502993586 48.858 2 -1.009266686076291 0.3050614499793165 1.0 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 130263 9762 VTSSSIRLSW True PC9_epitope_Rep1 1134.6033226099 1134.60166490379 42.408 3 -1.0092772994668138 0.3050614499793165 1.0 ['ENSG00000101203|ENST00000358894|COL20A1', 'nc|ENSG00000101203|Q9P218-2|COL20A1', 'nc|ENSG00000101203|Q9P218-3|COL20A1', 'ENST00000479501.5_1_20:61926459-61943880:+|nuORF'] 72445 10910 MTPCEQEL True PC9_epitope_Rep1 949.38850435701 949.38740993586 46.851 2 -1.0093188469859604 0.30509334009420747 1.0 ['ARHGEF1|p.W168C|1|0.07|ENSG00000076928|chr19:41892739-41892739|G/T|missense_variant'] 20254 7082 ENYFRGYEWWF True NCI_RA007_Epitope_Rep1 1595.6833638357496 1595.6817149037902 31.541 3 -1.0093227698458738 0.30509334009420747 1.0 ['GALC|p.L133F|2|0.09|ENSG00000054983|chr14:87986532-87986532|C/A|missense_variant'] 99184 9642 SLARTLDQPG True PC9_epitope_Rep3 1056.55637241748 1056.55526993586 42.036 2 -1.0093716560780273 0.30512522850699864 1.0 ['ENST00000378892.5_1_9:34635516-34635666:-|nuORF'] 37125 23580 GVSYVPYCRS True PC9_epitope_Rep1 1129.52262976105 1129.52207496793 95.488 1 -1.0094131006893765 0.30512522850699864 1.0 ['nc|ENSG00000134769|Q9Y4J8-8|DTNA', 'nc|ENSG00000134769|Q9Y4J8-12|DTNA', 'nc|ENSG00000134769|Q9Y4J8-16|DTNA', 'nc|ENSG00000134769|Q9Y4J8-5|DTNA', 'nc|ENSG00000134769|Q9Y4J8-4|DTNA', 'nc|ENSG00000134769|Q9Y4J8-3|DTNA'] 80781 5108 PLSPIKMC True H1975_Epitope_Rep3 887.46088145163 887.45978993586 24.759 2 -1.0095181256876513 0.30512635764417045 1.0 ['nc|ENSG00000178177|Q8N3X6-3|LCORL'] 16774 11156 EFFHCMFEEM True NCI_RA007_Epitope_Rep3 1348.4926521557197 1348.4915499358601 50.989 2 -1.009521970875066 0.30512635764417045 1.0 ['ENSG00000138642|ENST00000264346|HERC6', 'nc|ENSG00000138642|Q8IVU3-2|HERC6', 'HERC6|p.T729S|1|0.17|ENSG00000138642|chr4:88431241-88431241|C/G|missense_variant'] 121878 6204 VGPEEARSGAP True PC9_epitope_Rep2 1068.5199869087598 1068.5188899358602 29.258 2 -1.0095639480536618 0.30512635764417045 1.0 ['nc|ENSG00000143772|P27987-2|ITPKB', 'ENSG00000143772|ENST00000429204|ITPKB'] 140041 3383 YVLVPFHDPGF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 17.15 3 -1.0096947445107252 0.30515824304851363 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 54928 11573 LAGSGRLR True NCI_RA007_Epitope_Rep3 828.49298431528 828.49188993586 52.653 2 -1.0096951098884708 0.30515824304851363 1.0 ['ENST00000374825.8_1_6:32939382-32940003:+|nuORF'] 76429 5131 NSVHFEMKPGV True H1975_Epitope_Rep3 1243.60194271091 1243.6008499358602 24.841 2 -1.0097949079997346 0.30517271283905484 1.0 ['SORCS1|p.L1073M|1|0.33|ENSG00000108018|chr10:106597399-106597399|G/T|missense_variant'] 78145 5106 PAPLRAAPA True PC9_epitope_Rep6 862.5024863698198 862.50138993586 27.322 2 -1.0098057086955337 0.30517271283905484 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 80862 11563 PLVNPPGL True H1975_Epitope_Rep1 805.46978925921 805.46868993586 49.463 2 -1.0098118594633483 0.30517271283905484 1.0 ['nc|ENSG00000136487|P01242-2|GH2'] 114315 6479 TSATAPNLSDS True PC9_epitope_Rep1 1062.4829326937 1062.48182993586 29.726 2 -1.0098498483906766 0.30519125318532947 1.0 ['HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4'] 56684 8614 LEAECRLRCPR True NCI_RA007_Epitope_Rep1 1344.6754590876799 1344.67436993586 37.507 2 -1.0098601782511507 0.30519125318532947 1.0 ['ENST00000528182.5_2_11:111957606-111959624:+|nuORF', 'ENST00000528048.5_2_11:111957606-111965694:+|nuORF'] 119760 12513 VETQIYRP True PC9_epitope_Rep6 1004.5290950404799 1004.52798993586 59.562 2 -1.0098897920495098 0.3052005229874323 1.0 ['ENST00000429864.1_1_X:127575186-127575687:+|nuORF'] 35293 13856 GSRGCLAA True NCI_RA007_Epitope_Rep1 733.35410788397 733.3535549679301 57.916 1 -1.0099047705784165 0.305209792542192 1.0 ['ENST00000416860.2_2_1:2487810-2487939:-|nuORF'] 107742 9319 TALRYQKK True NCI_RA007_Epitope_Rep4 1006.59236400338 1006.5912699358599 42.701 2 -1.0099589847759816 0.30523240300976573 1.0 ['nc|ENSG00000121440|Q9UPQ7-3|PDZRN3', 'PDZRN3|p.H870Afs*142|1|0.12|ENSG00000121440|chr3:73383959-73383960|-/T|frameshift_variant', 'ENSG00000121440|ENST00000263666|PDZRN3', 'nc|ENSG00000121440|Q9UPQ7-2|PDZRN3'] 93104 4093 RRRPGCPA True NCI_RA007_Epitope_Rep5 911.4871877421898 911.4866349679301 22.21 1 -1.010002492538887 0.30524167189188467 1.0 ['ENST00000442815.1_1_21:44781197-44781521:-|nuORF'] 23107 18236 EVLRKTKN True NCI_RA007_Epitope_Rep2 986.58727862294 986.58673496793 75.692 1 -1.0100153319301783 0.30525613660618994 1.0 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69682690-69747802:-|nuORF', 'ENST00000480158.1_1_10:69714333-69714887:-|nuORF'] 64930 15978 LSCHCHSC True PC9_epitope_Rep4 888.3040635404002 888.30296993586 69.39 2 -1.010036442744747 0.30525613660618994 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 85190 12362 QKENLFMDLL True NCI_RA007_Epitope_Rep2 1249.63765951329 1249.63656993586 52.691 2 -1.0100459959928576 0.30525613660618994 1.0 ['ENSG00000155561|ENST00000285968|NUP205', 'ENST00000607647.5_1_7:135285632-135291519:+|nuORF'] 110589 11508 TISQDEILER True NCI_RA007_Epitope_Rep5 1202.6142812164198 1202.6131899358602 50.917 2 -1.0100709220962896 0.3052654046770988 1.0 ['nc|ENSG00000113790|Q08426-2|EHHADH', 'EHHADH|p.G661Afs*16|1|0.2|ENSG00000113790|chr3:185192416-185192416|C/-|frameshift_variant', 'ENSG00000113790|ENST00000231887|EHHADH'] 68767 15583 LVDMIYFLH True PC9_epitope_Rep3 1149.58925276889 1149.5881499358602 65.088 2 -1.01009496175878 0.30528801259304716 1.0 ['nc|ENSG00000089177|Q96L93-2|KIF16B'] 80826 20599 PLTPYSRMV True PC9_epitope_Rep1 1062.55320161334 1062.55210993586 84.049 2 -1.0101287099494813 0.3053106199058202 1.0 ['ENST00000356641.7_2_11:120207751-120207811:+|nuORF'] 43688 19473 IINSDVKIL True PC9_epitope_Rep1 1013.6120963884499 1013.61098993586 79.719 2 -1.010148314435952 0.30532915360501567 1.0 ['ENST00000272117.7_1_1:226820530-226820698:-|nuORF'] 59183 8830 LGFQKRWRK True NCI_RA007_Epitope_Rep5 1217.71454482473 1217.7134499358601 40.63 2 -1.0101669145701186 0.30532915360501567 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 65307 8321 LSEKQVKIWF True NCI_RA007_Epitope_Rep1 1276.71795843932 1276.7163149037901 36.367 3 -1.010270678465025 0.3054317957474055 1.0 ['ENSG00000169840|ENST00000302945|GSX1', 'ENST00000507839.1_1_4:54965775-54968086:+|nuORF'] 63403 11276 LPGIHVSA True PC9_epitope_Rep1 792.4493881678 792.44828993586 48.253 2 -1.010319860879415 0.3054462511171284 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 77932 22612 PAIPICSIPV True PC9_epitope_Rep3 1008.56778904832 1008.5672749679301 92.245 1 -1.0103347903206337 0.3054462511171284 1.0 ['nc|ENSG00000101096|Q13469-5|NFATC2', 'nc|ENSG00000101096|Q13469-3|NFATC2', 'nc|ENSG00000101096|Q13469-4|NFATC2', 'ENSG00000101096|ENST00000371564|NFATC2', 'nc|ENSG00000101096|Q13469|NFATC2'] 125318 20496 VLRWFAERVDL True NCI_RA007_Epitope_Rep2 1402.7721192704998 1402.77102993586 84.797 2 -1.010335379255048 0.3054462511171284 1.0 ['ENSG00000024422|ENST00000263277|EHD2', 'nc|ENSG00000024422|Q9NZN4-2|EHD2'] 124901 15621 VLLPMPRK True PC9_epitope_Rep5 952.58919319924 952.58808993586 65.097 2 -1.0103856340931436 0.30546070532998987 1.0 ['ENST00000540501.1_1_11:63960601-63960742:+|nuORF'] 15860 8597 EDLSIWLCGLL True NCI_RA007_Epitope_Rep2 1260.64241054056 1260.6413099358601 38.085 2 -1.0103868935053024 0.30546070532998987 1.0 ['GAS2L3|p.S59C|1|0.22|ENSG00000139354|chr12:100600539-100600539|C/G|missense_variant'] 62410 19232 LLRWEPYWPP True PC9_epitope_Rep1 1355.7026427283497 1355.7010049037901 78.775 3 -1.010404472173847 0.30546070532998987 1.0 ['nc|ENSG00000171105|P06213-2|INSR', 'ENSG00000171105|ENST00000302850|INSR'] 68282 14974 LTRLCRWDK True PC9_epitope_Rep2 1189.63899692597 1189.6378899358601 62.854 2 -1.0104387726751354 0.30546700988303077 1.0 ['ENSG00000154143|ENST00000284288|PANX3'] 111355 14141 TLIKTFVRSQT True PC9_epitope_Rep5 1292.7452358163198 1292.7436049037901 59.404 3 -1.0104506826233544 0.30546700988303077 1.0 ['ENSG00000198722|ENST00000635942|UNC13B', 'UBAP1-UNC13B|1|fusion', 'nc|ENSG00000198722|O14795|UNC13B', 'nc|ENSG00000198722|O14795-2|UNC13B'] 35600 11935 GTLDHYHGD True PC9_epitope_Rep3 1013.42027286749 1013.4191699358599 50.93 2 -1.0104507116731556 0.30546700988303077 1.0 ['ENST00000543824.5_1_12:9068661-9070284:+|nuORF'] 28723 15483 FSVTKNKI True PC9_epitope_Rep2 935.54401682863 935.54290993586 64.831 2 -1.0104516124687017 0.30546700988303077 1.0 ['nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENSG00000153721|ENST00000607772|CNKSR3'] 15236 5959 EAGDQDSREVR True H1975_Epitope_Rep1 1260.56945628232 1260.5683499358602 27.993 2 -1.0104571338807873 0.30546700988303077 1.0 ['ENSG00000155903|ENST00000286364|RASA2', 'nc|ENSG00000155903|Q15283|RASA2', 'RASA2-ACPL2|1|fusion'] 91030 18242 RLKTAAAAAA True NCI_RA007_Epitope_Rep2 942.5610638750998 942.55996993586 75.715 2 -1.0105107984603767 0.3054896102856838 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 129955 10750 VTNIFYKCY True H1975_Epitope_Rep1 1149.55286726017 1149.5517699358602 46.311 2 -1.0105646843786111 0.30550406102879396 1.0 ['ENST00000482541.2_1_6:100009542-100010747:-|nuORF'] 27115 17251 FLQKENNNTI True PC9_epitope_Rep1 1219.61970095003 1219.6186099358601 71.173 2 -1.0106113639044028 0.30550406102879396 1.0 ['nc|ENSG00000255298|Q8NG78|OR8G5'] 78484 4361 PDEERPEPP True H1975_Epitope_Rep2 1064.47745339044 1064.47634993586 21.888 2 -1.0106189746670753 0.30550406102879396 1.0 ['NLRP12|p.E547Gfs*21|1|0.14|ENSG00000142405|chr19:53810019-53810019|T/-|frameshift_variant', 'nc|ENSG00000142405|P59046-4|NLRP12', 'nc|ENSG00000142405|P59046-3|NLRP12', 'nc|ENSG00000142405|P59046-6|NLRP12', 'nc|ENSG00000142405|P59046-2|NLRP12', 'ENSG00000142405|ENST00000324134|NLRP12', 'nc|ENSG00000142405|P59046-7|NLRP12'] 79376 7202 PGLEGCCGAVL True PC9_epitope_Rep5 1017.4623380036098 1017.46124993586 32.668 2 -1.0107008485120392 0.30553999626577044 1.0 ['ENST00000255641.12_1_19:1980544-1980727:+|nuORF'] 117976 11879 VASATKKFSY True PC9_epitope_Rep3 1100.5866099165999 1100.58550993586 50.709 2 -1.0107204128897544 0.30555444422217776 1.0 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 128180 18812 VRSVILQGSG True NCI_RA007_Epitope_Rep3 1014.5821932424999 1014.58108993586 82.264 2 -1.0107637335773172 0.30555444422217776 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 28137 19279 FRKKKREQ True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 79.147 2 -1.0108210256075736 0.30555444422217776 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 31650 12473 GEHLCPAAL True PC9_epitope_Rep1 909.4378375079299 909.43674993586 52.845 2 -1.0108710393408151 0.30557296598077 1.0 ['chr4:15790918-15816511|135|20.32|0.09|7.8|+|2|TE_info:SVA_D,SVA_D_dup355,SVA,Retroposon,donor,+,15790204,15790918|None,CD38|7'] 69076 7203 LVIRDAQREDE True NCI_RA007_Epitope_Rep2 1342.6840921117398 1342.6829899358602 32.638 2 -1.0108890033416895 0.30557296598077 1.0 ['nc|ENSG00000161643|A6NMB1|SIGLEC16', 'nc|ENSG00000161640|Q96RL6-2|SIGLEC11', 'ENSG00000161640|ENST00000447370|SIGLEC11'] 118199 6049 VAWDREKRL True NCI_RA007_Epitope_Rep3 1171.6461904813898 1171.64455490379 30.773 3 -1.0110861831853577 0.30569409254567276 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 117262 21418 VAAAAATTTA True PC9_epitope_Rep4 846.4446967101801 846.44358993586 90.562 2 -1.0111100410578433 0.30569409254567276 1.0 ['ENSG00000119318|ENST00000358015|RAD23B', 'nc|ENSG00000119318|P54727-2|RAD23B'] 83674 10880 QEAKRQHQSDC True H1975_Epitope_Rep3 1328.58914618108 1328.58804993586 46.932 2 -1.0111169316761 0.30569409254567276 1.0 ['nc|ENSG00000143367|Q9NNX1-3|TUFT1', 'nc|ENSG00000143367|Q9NNX1-2|TUFT1', 'ENSG00000143367|ENST00000368849|TUFT1'] 100677 4500 SLQWRHRWDTP True PC9_epitope_Rep3 1480.7323797168397 1480.73074490379 22.402 3 -1.0111615116094859 0.3057033510687949 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 27163 8903 FLSEPVTVP True H1975_Epitope_Rep3 987.5276980581499 987.52660993586 39.244 2 -1.0112288945424006 0.3057126093449968 1.0 ['ENSG00000154359|ENST00000398246|LONRF1', 'nc|ENSG00000154359|Q17RB8-2|LONRF1', 'LONRF1|p.P468Sfs*21|1|0.37|ENSG00000154359|chr8:12736750-12736751|-/A|frameshift_variant'] 42658 14287 IEVEHIFKWI True H1975_Epitope_Rep2 1312.7179584393198 1312.7168699358601 60.104 2 -1.011257016765836 0.3057311251566792 1.0 ['ENSG00000239305|ENST00000237455|RNF103'] 100269 12507 SLLRKNFGD True PC9_epitope_Rep1 1048.56654317836 1048.5654499358602 52.976 2 -1.011271152279101 0.3057311251566792 1.0 ['ENST00000367265.7_1_1:202725604-202729586:-|nuORF'] 133281 15528 WEKWLRWYVEK True NCI_RA007_Epitope_Rep2 1621.84053318349 1621.8394299358602 65.106 2 -1.0113541408191282 0.30576705113674246 1.0 ['ENST00000580496.1_1_17:61713981-61714308:+|nuORF'] 116149 17264 TVTEFKQL True H1975_Epitope_Rep2 964.5229470308798 964.52184993586 71.697 2 -1.0113882671389753 0.30577223088923555 1.0 ['nc|ENSG00000170242|Q96K76-2|USP47', 'ENSG00000170242|ENST00000527733|USP47', 'nc|ENSG00000170242|Q96K76|USP47', 'USP47|p.E906Kfs*43|1|0.29|ENSG00000170242|chr11:11942677-11942677|G/-|frameshift_variant'] 18076 9324 EIKESSKLLNK True NCI_RA007_Epitope_Rep1 1287.73981608271 1287.73870993586 40.263 2 -1.011403880592494 0.30577223088923555 1.0 ['PRDM9|p.R459S|1|0.13|ENSG00000164256|chr5:23526465-23526465|G/T|missense_variant'] 103237 14211 SQSLRLPL True PC9_epitope_Rep3 912.53926580136 912.53816993586 59.749 2 -1.0114453346914265 0.3057814875063335 1.0 ['ENST00000380007.2_1_5:94956482-94957517:+|nuORF'] 98722 8222 SIRRELLRMFH True PC9_epitope_Rep2 1456.8085218625597 1456.80688490379 36.984 3 -1.0115007615546467 0.3058666666666667 1.0 ['ENSG00000185085|ENST00000330574|INTS5'] 53521 6822 KVPEKLAA True PC9_epitope_Rep2 854.5225531080598 854.52144993586 31.646 2 -1.0115075016355335 0.3058666666666667 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 58790 16890 LFPGHCIL True H1975_Epitope_Rep2 898.47349474066 898.47238993586 70.212 2 -1.011531124649954 0.30587592165437794 1.0 ['ENST00000468376.2_1_20:45867286-45947776:-|nuORF'] 85093 10918 QIQNENLLLRQ True PC9_epitope_Rep5 1367.75211210191 1367.75100993586 46.986 2 -1.0115772042952347 0.30591184235087066 1.0 ['ENST00000571006.5_1_16:46521999-46540142:-|nuORF', 'ENST00000566201.6_1_16:46508202-46534771:-|nuORF'] 22627 9820 ETQRDQERRIR True H1975_Epitope_Rep1 1485.7760354339696 1485.7749299358602 42.701 2 -1.0116261916644032 0.3059344292894951 1.0 ['ENST00000575300.1_1_16:4312060-4322792:-|nuORF', 'ENSG00000090447|ENST00000204517|TFAP4'] 58460 15447 LEWWKTGIAF True H1975_Epitope_Rep3 1249.6495445263297 1249.64844993586 64.832 2 -1.0117183877833693 0.30595293647090194 1.0 ['ENSG00000164023|ENST00000690982|SGMS2'] 36496 5509 GVKGAKIK True NCI_RA007_Epitope_Rep3 799.5279728416699 799.52686993586 28.671 2 -1.0117435857062467 0.30595293647090194 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 112630 9498 TPEFVDLSVP True H1975_Epitope_Rep1 1102.55464108198 1102.55354993586 41.454 2 -1.0118594743158642 0.30598885422499533 1.0 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'nc|ENSG00000185567|Q8IVF2-2|AHNAK2'] 71607 18192 MLKWISWR True NCI_RA007_Epitope_Rep4 1118.60590589254 1118.6048099358602 78.726 2 -1.011896528439028 0.3060114389323663 1.0 ['nc|ENSG00000160145|O60229-5|KALRN', 'ENST00000393496.5_1_3:124223749-124393462:+|nuORF'] 27802 4947 FQERNREHERH True NCI_RA007_Epitope_Rep2 1536.7294195947197 1536.72778490379 23.863 3 -1.0119554712412917 0.3060206911262799 1.0 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7', 'ENST00000537641.5_1_11:61178417-61183276:-|nuORF'] 19751 11817 ELSSAERYNP True PC9_epitope_Rep1 1164.54111627616 1164.54000993586 50.321 2 -1.0120168223573536 0.30603919477403013 1.0 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 33724 8196 GLRKIIVRVLL True NCI_RA007_Epitope_Rep4 1278.8863611770998 1278.8847149037902 38.314 3 -1.01203893957896 0.30603919477403013 1.0 ['ENST00000464167.5_1_3:197676878-197677004:+|nuORF'] 110446 5013 TINYNEEFTWR True H1975_Epitope_Rep2 1471.67319307487 1471.67155490379 24.365 3 -1.0120722780889675 0.3060484462278866 1.0 ['nc|ENSG00000140254|Q1HG43-3|DUOXA1', 'ENSG00000140254|ENST00000560572|DUOXA1', 'nc|ENSG00000140254|Q1HG43-2|DUOXA1'] 25016 27638 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 113.26 2 -1.0121562754525706 0.3060976910361009 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 31184 14670 GDGGCYGD True NCI_RA007_Epitope_Rep5 742.2228189308998 742.22227496793 63.096 1 -1.012430129923296 0.30624025168970714 1.0 ['nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1'] 40312 3804 HRRNSNTK True NCI_RA007_Epitope_Rep2 1011.53222335831 1011.53112993586 19.433 2 -1.01244603191209 0.3062495000933159 1.0 ['ENST00000278618.8_1_11:105967588-105967645:+|nuORF'] 10460 11965 CMRWIFENWR True NCI_RA007_Epitope_Rep1 1439.6590807475498 1439.65798993586 50.528 2 -1.0125235797090641 0.30627316110800074 1.0 ['ENSG00000168334|ENST00000340369|XIRP1', 'nc|ENSG00000168334|Q702N8-2|XIRP1'] 110278 10916 TIGGVKIYFPY True H1975_Epitope_Rep3 1256.68051030144 1256.6794099358601 47.075 2 -1.0125342540366828 0.30627316110800074 1.0 ['BRIP1|p.T1062Ifs*18|1|0.25|ENSG00000136492|chr17:61683860-61683861|TG/-|frameshift_variant', 'nc|ENSG00000136492|Q9BX63-2|BRIP1', 'ENSG00000136492|ENST00000259008|BRIP1'] 110752 22907 TKKKIKGI True H1975_Epitope_Rep1 914.6276868829398 914.62658993586 95.261 2 -1.0125615701060018 0.30627316110800074 1.0 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1', 'ENSG00000113580|ENST00000394464|NR3C1', 'nc|ENSG00000113580|P04150-3|NR3C1', 'nc|ENSG00000113580|P04150-15|NR3C1', 'nc|ENSG00000113580|P04150-14|NR3C1', 'nc|ENSG00000113580|P04150-13|NR3C1', 'nc|ENSG00000113580|P04150-12|NR3C1', 'nc|ENSG00000113580|P04150-11|NR3C1', 'nc|ENSG00000113580|P04150-8|NR3C1', 'nc|ENSG00000113580|P04150-10|NR3C1', 'nc|ENSG00000113580|P04150-16|NR3C1'] 27611 14969 FPTLCLYDQR True PC9_epitope_Rep5 1254.60669373818 1254.60558993586 62.58 2 -1.0125753841526053 0.30627316110800074 1.0 ['ENST00000398073.6_1_12:58217236-58217407:-|nuORF'] 21772 4839 ESDFLPVSSAK True H1975_Epitope_Rep3 1178.5819184589798 1178.58028490379 23.74 3 -1.012637207741648 0.30627532522926 1.0 ['ENSG00000152217|ENST00000649279|SETBP1', 'nc|ENSG00000152217|Q9Y6X0-2|SETBP1', 'SETBP1|p.W1242Lfs*13|1|0.17|ENSG00000152217|chr18:44953062-44953063|-/T|frameshift_variant', 'SETBP1|p.R384Mfs*49|1|0.08|ENSG00000152217|chr18:44950490-44950523|AGGCAGAACGTGAGTTCTGCCAGTAATCCTGAAA/-|frameshift_variant'] 111050 12395 TLDQSAALSP True PC9_epitope_Rep6 1001.5029398622898 1001.50184993586 59.091 2 -1.0126823257020707 0.30627532522926 1.0 ['ENST00000259523.10_1_8:128747712-128748060:+|nuORF'] 22818 6748 EVEALSGCYPL True H1975_Epitope_Rep1 1179.5481758025498 1179.54706993586 30.997 2 -1.0126857355694816 0.30627532522926 1.0 ['ENSG00000181323|ENST00000323675|SPEM1'] 118530 18021 VDTRLRAL True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 76.117 2 -1.0126893865414712 0.30627532522926 1.0 ['ENSG00000251692|ENST00000447419|PTX4', 'nc|ENSG00000251692|Q96A99-2|PTX4'] 108676 11178 TELLLLLQP True H1975_Epitope_Rep1 1038.63249747986 1038.6314099358601 47.966 2 -1.012717993744604 0.30627532522926 1.0 ['ENSG00000160753|ENST00000368352|RUSC1', 'nc|ENSG00000160753|Q9BVN2-2|RUSC1', 'nc|ENSG00000160753|Q9BVN2-3|RUSC1'] 95831 13504 SDIELKAL True NCI_RA007_Epitope_Rep5 887.4963979298699 887.49530993586 58.628 2 -1.012724069319104 0.30627532522926 1.0 ['ENSG00000235711|ENST00000421388|ANKRD34C'] 115051 8282 TTRAEALTEP True H1975_Epitope_Rep2 1087.55095268387 1087.54984993586 36.807 2 -1.0127895300320071 0.3062845718093969 1.0 ['ENSG00000091317|ENST00000205636|CMTM6'] 55008 27197 LAKKRQRRLVL True PC9_epitope_Rep5 1379.9201209168698 1379.9184749037902 111.41 3 -1.012847132628879 0.3062897356951497 1.0 ['STYXL2|p.E628V|1|0.34|ENSG00000198842|chr1:167127014-167127014|A/T|missense_variant'] 85064 14142 QILPYLYLGCA True PC9_epitope_Rep6 1252.65258130144 1252.6514899358601 66.268 2 -1.012867265481212 0.3062897356951497 1.0 ['nc|ENSG00000164086|Q16829-2|DUSP7', 'ENSG00000164086|ENST00000495880|DUSP7'] 111776 7123 TLQREKDSP True H1975_Epitope_Rep3 1072.5512870370399 1072.55018993586 32.369 2 -1.012946117816639 0.3063256384283201 1.0 ['ENSG00000152952|ENST00000282903|PLOD2', 'nc|ENSG00000152952|O00469-3|PLOD2', 'ENST00000478436.1_1_3:145795570-145803239:-|nuORF'] 38289 13054 HFKRYRYRRPG True NCI_RA007_Epitope_Rep4 1534.8381821980597 1534.8370899358601 57.312 2 -1.0129764396863017 0.30634821202468376 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN'] 74437 9179 NIVTGTDEQ True NCI_RA007_Epitope_Rep4 975.4509042894299 975.44980993586 42.147 2 -1.0130149917226536 0.30635745701719314 1.0 ['ENSG00000182481|ENST00000330459|KPNA2', 'ENST00000578492.5_1_17:62750240-62754721:-|nuORF', 'ENSG00000185467|ENST00000327442|KPNA7', 'ENSG00000186432|ENST00000334256|KPNA4', 'KPNA3|p.N437Kfs*8|1|0.2|ENSG00000102753|chr13:49705682-49705683|-/T|frameshift_variant', 'ENSG00000102753|ENST00000261667|KPNA3'] 24292 7061 FAAQAQLLADR True NCI_RA007_Epitope_Rep5 1202.64077074778 1202.6396699358602 33.84 2 -1.0131079303010455 0.30644666871026643 1.0 90300 22388 RHVRRLPE True PC9_epitope_Rep4 1061.6206444398897 1061.61954993586 94.349 2 -1.0131186163443036 0.30645591214415185 1.0 ['ENST00000489643.6_1_9:34648764-34649266:+|nuORF', 'ENST00000557706.5_1_9:34647742-34649031:+|nuORF', 'ENST00000555086.5_1_9:34647111-34648905:+|nuORF', 'nc|ENSG00000213930|P07902-2|GALT', 'ENST00000554638.5_1_9:34647742-34650443:+|nuORF', 'ENSG00000213930|ENST00000378842|GALT'] 83305 5284 QAKQRAEVL True NCI_RA007_Epitope_Rep4 1041.5930922793698 1041.59198993586 26.876 2 -1.0131670104723034 0.3064836409675485 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C'] 89972 2569 RGAGSKRKRR True PC9_epitope_Rep3 1170.71700443622 1170.71536490379 14.181 3 -1.013171208421504 0.3064836409675485 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 67982 14007 LTLRKERKCNK True H1975_Epitope_Rep1 1387.8081875093897 1387.8070899358602 59.04 2 -1.0131745813716304 0.3064836409675485 1.0 ['ENST00000381396.9_1_16:19535357-19543792:+|nuORF'] 81683 1908 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 10.75 3 -1.0132095663979694 0.3065195372887681 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 44069 10287 ILLLYLVP True PC9_epitope_Rep3 942.6153908637399 942.61428993586 44.516 2 -1.0132994939400344 0.3065616588044029 1.0 ['SLC34A3|p.W461L|1|0.09|ENSG00000198569|chr9:137235998-137235998|G/T|missense_variant'] 70624 22593 MAKKVAVIG True PC9_epitope_Rep4 915.5575587177898 915.55646993586 95.136 2 -1.0133046780343344 0.3065616588044029 1.0 ['ENSG00000076258|ENST00000367749|FMO4', 'ENST00000475780.5_1_1:171285408-171306524:+|nuORF', 'ENST00000493513.1_1_1:171154462-171155083:+|nuORF', 'ENST00000462643.2_1_1:171154426-171162550:+|nuORF', 'ENST00000209929.9_1_1:171154426-171178089:+|nuORF', 'ENSG00000094963|ENST00000209929|FMO2'] 15256 9608 EAGPEVDPEE True H1975_Epitope_Rep1 1070.44039917538 1070.4393099358601 41.883 2 -1.0133131373939281 0.3065616588044029 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 55112 18476 LALRLAGL True PC9_epitope_Rep2 825.5436229058099 825.54252993586 76.403 2 -1.013349231193237 0.3065616588044029 1.0 ['ENSG00000266714|ENST00000645453|MYO15B', 'nc|ENSG00000266714|Q96JP2-2|MYO15B'] 73374 5322 NEQLEEIEK True NCI_RA007_Epitope_Rep1 1130.54553295026 1130.54442993586 24.779 2 -1.0133585053969223 0.3065616588044029 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 72135 12773 MREREREQRWR True NCI_RA007_Epitope_Rep2 1630.8222744337397 1630.82116993586 54.301 2 -1.0133701652052676 0.3065616588044029 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 107936 4296 TAWYWYQNRHI True NCI_RA007_Epitope_Rep3 1536.7262317072398 1536.7245749037902 23.631 3 -1.0134661958996611 0.3066242021241155 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|123|2|sense'] 69724 19294 LWERRPSRGLS True PC9_epitope_Rep3 1355.7422161245497 1355.74110993586 79.436 2 -1.0134799359849107 0.3066385949950697 1.0 ['ENST00000527483.5_1_10:127395624-127396187:-|nuORF'] 101402 4437 SNDYRVAV True PC9_epitope_Rep2 922.4508447197799 922.44974993586 22.423 2 -1.0134958594470014 0.3066385949950697 1.0 ['ENSG00000165023|ENST00000375765|DIRAS2'] 122439 19856 VGSLEQAMLDA True PC9_epitope_Rep2 1132.54342477528 1132.5423299358602 81.768 2 -1.0135025907774804 0.3066385949950697 1.0 ['ENSG00000092439|ENST00000646667|TRPM7'] 4217 8316 AIDTSNLEKPL True H1975_Epitope_Rep1 1199.63976768827 1199.6386699358602 36.919 2 -1.0135270742439169 0.30664783402401163 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.A1416Pfs*6|1|0.33|ENSG00000047936|chr6:117353065-117353065|C/-|frameshift_variant'] 56361 18811 LDRNWRILFVM True NCI_RA007_Epitope_Rep1 1461.7914748160902 1461.79036993586 77.314 2 -1.0135670813032889 0.3066703976121949 1.0 ['ENST00000502537.1_1_4:86863224-86863332:+|nuORF'] 41392 7547 IAQKICYYFIE True H1975_Epitope_Rep1 1389.70025976985 1389.69916993586 34.023 2 -1.013583535841264 0.3066796359711655 1.0 ['nc|ENSG00000185917|Q9NVD3-3|SETD4', 'ENSG00000185917|ENST00000332131|SETD4', 'ENST00000487297.5_1_21:37408417-37414196:-|nuORF'] 99732 7589 SLGIDEGAWMK True NCI_RA007_Epitope_Rep2 1205.57505925673 1205.57396993586 34.143 2 -1.0136473484224178 0.3066950902671374 1.0 ['RYR2|p.N3287S|1|0.29|ENSG00000198626|chr1:237707228-237707228|A/G|missense_variant'] 41820 11006 IDSIRGYFGET True H1975_Epitope_Rep1 1256.6037165327198 1256.60260993586 47.295 2 -1.0136549709458955 0.3066950902671374 1.0 ['nc|ENSG00000160746|Q9NW15-4|ANO10', 'nc|ENSG00000160746|Q9NW15-3|ANO10', 'nc|ENSG00000160746|Q9NW15-5|ANO10', 'ENSG00000160746|ENST00000292246|ANO10'] 87876 14978 QVLHVQLSL True PC9_epitope_Rep4 1035.6076797143498 1035.60658993586 65.551 2 -1.0136842362738832 0.3066950902671374 1.0 ['ENST00000303545.3_1_8:125487403-125498198:+|nuORF'] 115501 7676 TVGGWEEAK True H1975_Epitope_Rep3 975.4661604307499 975.46506993586 34.508 2 -1.0137013863259277 0.3066950902671374 1.0 ['ENST00000305123.5_1_2:227663749-227664043:-|nuORF'] 9337 9887 AVSYAHILC True H1975_Epitope_Rep1 975.4847877003499 975.48368993586 42.964 2 -1.0137050907422511 0.3066950902671374 1.0 ['ENSG00000181616|ENST00000322653|OR52H1'] 28251 3948 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 20.448 2 -1.0137444446770647 0.3066950902671374 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 55909 10576 LDGPGERGPAP True PC9_epitope_Rep2 1064.5250722892 1064.5239699358601 45.998 2 -1.0138534632592773 0.30671356435775476 1.0 ['ENST00000576921.1_1_16:3073505-3073679:-|nuORF'] 115787 24580 TVLVHLEIKVL True NCI_RA007_Epitope_Rep5 1262.79620876002 1262.7951099358602 102.02 2 -1.0138589647878506 0.30671356435775476 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 63024 12621 LNIAEQNWSPG True PC9_epitope_Rep5 1227.58840082175 1227.58730993586 53.549 2 -1.0138752713434518 0.30671871461117256 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF', 'ENSG00000108349|ENST00000264645|CASC3'] 59980 8292 LHPGHFKRR True PC9_epitope_Rep4 1146.65227892134 1146.65062490379 39.355 3 -1.0138977217920366 0.30671871461117256 1.0 ['ENST00000426250.3_1_12:72665645-72666709:-|nuORF'] 59436 10484 LGLTQTCETLK True NCI_RA007_Epitope_Rep1 1205.6325741328499 1205.6314699358602 44.764 2 -1.0139373051617047 0.3067279509725553 1.0 ['ENSG00000169896|ENST00000544665|ITGAM', 'nc|ENSG00000169896|P11215-2|ITGAM'] 40690 7805 HTMAVVGHQGS True PC9_epitope_Rep2 1122.52402674338 1122.52237490379 35.392 3 -1.0140296996563725 0.3067597452772375 1.0 ['ENST00000525065.1_1_11:117062460-117063438:+|nuORF'] 29399 9930 FVFEYMHTDL True PC9_epitope_Rep3 1300.579810284 1300.5787099358602 43.153 2 -1.0140459635984467 0.3067597452772375 1.0 ['ENST00000451080.5_1_2:202672326-202741280:+|nuORF', 'nc|ENSG00000138395|Q96Q40-4|CDK15', 'nc|ENSG00000138395|Q96Q40-3|CDK15', 'nc|ENSG00000138395|Q96Q40-5|CDK15', 'ENSG00000138395|ENST00000652192|CDK15'] 59862 15215 LHGLASLL True PC9_epitope_Rep1 822.4963383602201 822.49524993586 63.345 2 -1.0140625951438784 0.30676898072285946 1.0 ['ENSG00000183134|ENST00000332539|PTGDR2'] 102438 16435 SPWDSHSRLW True PC9_epitope_Rep1 1269.58906952809 1269.58741490379 68.041 3 -1.0141398670496733 0.3068181818181818 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 81682 1847 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 10.404 3 -1.0141771039670162 0.30685405981482716 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 93554 13832 RSRIEILRR True NCI_RA007_Epitope_Rep4 1197.7418222017297 1197.74017490379 60.457 3 -1.0142076163007077 0.3068551180263228 1.0 ['CON__P02672'] 83142 7233 PYRQRWAWRTW True NCI_RA007_Epitope_Rep2 1604.8112987438797 1604.81020993586 32.755 2 -1.0142364886492408 0.3068551180263228 1.0 ['ENST00000491400.5_1_6:35254110-35255623:+|nuORF', 'ENST00000469195.5_3_6:35254110-35258154:+|nuORF', 'ENST00000229405.8_1_6:35254110-35258558:+|nuORF'] 85957 7658 QPEQDALSGPV True H1975_Epitope_Rep1 1139.5458673034298 1139.5447699358601 34.433 2 -1.0142407815758028 0.3068551180263228 1.0 ['ENST00000361866.7_1_21:47424238-47424391:+|nuORF'] 35938 7618 GVAQDDVR True H1975_Epitope_Rep3 858.4195445915 858.4184499358599 34.283 2 -1.014366405668021 0.3068705543863388 1.0 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 101437 209 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 1.1777 2 -1.0143739178208802 0.3068705543863388 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 125922 4342 VNYFFLLLLEV True NCI_RA007_Epitope_Rep2 1368.76932530584 1368.76768490379 21.526 3 -1.0143911385970275 0.3068705543863388 1.0 ['ENST00000535297.1_1_11:61556606-61557928:-|nuORF'] 76360 10416 NSFMHSMV True H1975_Epitope_Rep2 951.3942584437899 951.39316993586 45.079 2 -1.0144082380727668 0.3068705543863388 1.0 ['nc|ENSG00000260357|Q6PK57|DNM1P34'] 98351 13622 SIHAYHSF True PC9_epitope_Rep1 960.4453654165201 960.44426993586 57.254 2 -1.0144138002556866 0.3068705543863388 1.0 ['DCAF4L2|p.D298Tfs*2|1|0.22|ENSG00000176566|chr8:87873080-87873080|C/-|frameshift_variant', 'ENSG00000176566|ENST00000319675|DCAF4L2', 'DCAF4L2|p.G203C|1|0.17|ENSG00000176566|chr8:87873365-87873365|C/A|missense_variant'] 13689 11185 DQFEVSIK True H1975_Epitope_Rep3 964.48656152216 964.48601496793 48.121 1 -1.0144173456373944 0.3068705543863388 1.0 ['ENST00000488131.1_1_1:227257438-227268709:-|nuORF'] 93365 4165 RRVPEVQLMVQ True NCI_RA007_Epitope_Rep2 1353.7550893073699 1353.75343490379 20.84 3 -1.0144505951542182 0.3068849314703571 1.0 ['CON__P01030'] 63412 11221 LPGIHVSA True PC9_epitope_Rep5 792.4493881678 792.44828993586 48.151 2 -1.0144522469919974 0.3068849314703571 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 36931 12186 GVRDSSYSL True PC9_epitope_Rep1 982.4719740871799 982.47086993586 51.731 2 -1.0144591546401418 0.3068849314703571 1.0 ['ENSG00000112308|ENST00000378119|C6orf62', 'nc|nan|Q9GZU0-2|C6orf62', 'C6orf62-FAM65B|1|fusion'] 127686 15975 VRGGVGGGLIG True NCI_RA007_Epitope_Rep3 940.5454138109598 940.54430993586 70.509 2 -1.014494035463975 0.3069300336978383 1.0 ['ENST00000566392.5_1_16:67336668-67360655:-|nuORF'] 19353 11669 ELNHQHAAA True H1975_Epitope_Rep1 989.4678917662499 989.46678993586 49.874 2 -1.0145053448253174 0.3069300336978383 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 82888 17357 PVWCDWQTL True PC9_epitope_Rep3 1146.51681610462 1146.51517490379 71.936 3 -1.014517361314856 0.30693108867638047 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF'] 18314 6438 EITTFLYY True H1975_Epitope_Rep1 1048.51171364084 1048.5106099358602 29.825 2 -1.0145226038072055 0.30693108867638047 1.0 ['nc|ENSG00000113391|Q8WUF8-2|ARB2A', 'ENST00000506398.6_1_5:93217085-93410459:-|nuORF'] 5878 4682 APGRCRSRFP True H1975_Epitope_Rep3 1145.58763005945 1145.5865299358602 23.133 2 -1.0145289351946638 0.30693108867638047 1.0 ['ENST00000478970.6_1_11:18416236-18416389:+|nuORF'] 19824 20876 ELTSNLFNIY True PC9_epitope_Rep5 1212.6026539035602 1212.60154993586 85.352 2 -1.0145430287153199 0.30695363797397546 1.0 ['ENSG00000184949|ENST00000535113|FAM227A', 'nc|ENSG00000184949|F5H4B4-2|FAM227A', 'ENST00000540952.5_1_22:38982050-39003412:-|nuORF'] 59343 12146 LGKFEKNV True PC9_epitope_Rep4 933.5283667644899 933.52726993586 54.536 2 -1.0146104036152868 0.3069720982886062 1.0 ['ENSG00000147488|ENST00000689386|ST18'] 13296 7355 DLYEYKYCTDV True NCI_RA007_Epitope_Rep4 1410.6013335742198 1410.6002299358602 34.931 2 -1.0146682700936982 0.3069720982886062 1.0 ['ENSG00000011114|ENST00000334746|BTBD7', 'BTBD7|p.H927Tfs*21|1|0.19|ENSG00000011114|chr14:93242893-93242894|-/T|frameshift_variant', 'BTBD7|p.K323Nfs*5|1|0.47|ENSG00000011114|chr14:93294051-93294051|T/-|frameshift_variant', 'nc|ENSG00000011114|Q9P203-3|BTBD7'] 35977 7740 GVAVREDGGTV True PC9_epitope_Rep4 1058.5356369729 1058.53452993586 37.162 2 -1.0147323082978046 0.30698132807713824 1.0 ['ENSG00000129250|ENST00000320785|KIF1C', 'ENST00000572959.1_1_17:4910768-4914860:+|nuORF'] 12920 12795 DLNEALTQPV True PC9_epitope_Rep5 1098.55570371114 1098.55460993586 54.226 2 -1.014807004136622 0.3069905576198277 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 83931 5093 QEKNPRDK True NCI_RA007_Epitope_Rep5 1013.5254066423698 1013.52430993586 26.288 2 -1.014868721742664 0.307039740038355 1.0 ['ENSG00000137338|ENST00000682144|PGBD1'] 131410 1780 VVTKEKLLLE True PC9_epitope_Rep1 1170.72237511342 1170.72073490379 9.8028 3 -1.0149541991485707 0.30708892114690567 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 78839 20987 PEQRRKKLQQR True H1975_Epitope_Rep2 1465.8589772122898 1465.85734490379 86.875 3 -1.0149699282251035 0.3071114662405114 1.0 ['nc|ENSG00000137942|Q5T0N5-3|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-4|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-2|FNBP1L', 'nc|ENSG00000137942|Q5T0N5-5|FNBP1L', 'ENSG00000137942|ENST00000271234|FNBP1L'] 139253 5313 YTDAHGDLL True H1975_Epitope_Rep1 1003.46107505031 1003.45996993586 25.498 2 -1.0150116288973219 0.3071606450839648 1.0 ['ENSG00000102981|ENST00000458121|PARD6A', 'nc|ENSG00000102981|Q9NPB6|PARD6A'] 59381 12241 LGLGLGGR True NCI_RA007_Epitope_Rep2 741.44972252097 741.44917496793 52.215 1 -1.0150431491529985 0.3071831886219571 1.0 ['ENST00000586064.3_1_19:19368617-19368821:-|nuORF', 'nc|ENSG00000120458|Q6P1R3-3|MSANTD2', 'ENSG00000120458|ENST00000374979|MSANTD2'] 81681 1785 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 10.055 3 -1.01515303059013 0.3071924147390569 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 30475 8449 GAGLGADE True H1975_Epitope_Rep3 688.30278350376 688.3022349679301 37.483 1 -1.0151828162332532 0.3072067753275807 1.0 ['ENST00000155926.8_1_2:12858164-12858434:+|nuORF'] 11849 4767 DHNDGLGNAF True NCI_RA007_Epitope_Rep1 1058.44173658806 1058.44117496793 22.622 1 -1.0151946842221844 0.3072067753275807 1.0 ['ENSG00000271447|ENST00000605424|MMP28'] 16959 5252 EGGPLEGAAW True NCI_RA007_Epitope_Rep2 985.4505103666099 985.44940993586 25.05 2 -1.0151967871244871 0.3072067753275807 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 20625 6444 EQEWDPQK True H1975_Epitope_Rep3 1058.4668887067398 1058.4657899358601 29.762 2 -1.0153402899008146 0.3072293167503362 1.0 ['ENSG00000077274|ENST00000324068|CAPN6'] 122132 17656 VGRHQRGR True NCI_RA007_Epitope_Rep1 964.5427284723598 964.54217496793 72.813 1 -1.0154558044326354 0.30725185757277157 1.0 ['ENSG00000107282|ENST00000265381|APBA1', 'nc|ENSG00000107282|Q02410-2|APBA1', 'APBA1|p.V481Rfs*28|2|0.28|ENSG00000107282|chr9:69467865-69467866|-/A|frameshift_variant'] 39792 6170 HQDSSILESR True PC9_epitope_Rep5 1170.5629143499 1170.56125490379 28.718 3 -1.0154608753251695 0.307261082038376 1.0 ['ENST00000508158.5_1_4:3386893-3430067:+|nuORF', 'nc|ENSG00000159788|O14924-7|RGS12', 'nc|ENSG00000159788|O14924-6|RGS12', 'nc|ENSG00000159788|O14924-2|RGS12', 'nc|ENSG00000159788|O14924-3|RGS12', 'nc|ENSG00000159788|O14924-5|RGS12', 'nc|ENSG00000159788|O14924-4|RGS12', 'ENSG00000159788|ENST00000336727|RGS12', 'ENST00000515521.5_1_4:3422373-3428454:+|nuORF'] 37022 10203 GVSAALALK True H1975_Epitope_Rep1 828.50690304392 828.50580993586 44.186 2 -1.0154977423747154 0.30727030625832225 1.0 ['ENST00000357802.6_1_22:42970741-42976277:-|nuORF', 'ENSG00000189306|ENST00000323013|RRP7A'] 128587 6349 VSKQHRWYLQN True H1975_Epitope_Rep1 1457.7527808082498 1457.7516899358602 29.482 2 -1.0155850319435444 0.30729284563454545 1.0 ['nc|ENSG00000146453|Q8NA58|PNLDC1', 'ENSG00000146453|ENST00000392167|PNLDC1'] 71362 9660 MIAAIHSSSA True PC9_epitope_Rep5 986.4855159763401 986.48440993586 42.124 2 -1.0156416046076497 0.307315384410535 1.0 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32'] 13992 6597 DRSFTISV True PC9_epitope_Rep4 923.47124581119 923.47014993586 32.534 2 -1.0156554505384379 0.3073205155517682 1.0 ['ENST00000328403.10_1_6:38472323-38545453:-|nuORF', 'ENST00000314100.10_1_6:38312809-38545453:-|nuORF'] 15522 5736 EARLNQKKY True NCI_RA007_Epitope_Rep5 1148.6302060640799 1148.62855490379 28.751 3 -1.0156686764846923 0.3073205155517682 1.0 ['ENSG00000116984|ENST00000366577|MTR'] 80081 22481 PKGPGSLL True PC9_epitope_Rep5 767.45413919507 767.45304993586 91.475 2 -1.0156915621514468 0.30733896093521157 1.0 ['ANO8|p.R965G|1|0.24|ENSG00000074855|chr19:17325155-17325155|G/C|missense_variant'] 106096 21665 SVMVTGGP True PC9_epitope_Rep2 746.3632755853399 746.36272496793 88.811 1 -1.0156929768498295 0.30733896093521157 1.0 ['ENST00000511979.1_1_5:138723708-138724322:-|nuORF', 'nc|ENSG00000170476|Q8WU39-3|MZB1', 'ENST00000417694.6_1_5:138723456-138724322:-|nuORF', 'ENST00000503481.5_1_5:138723456-138725442:-|nuORF', 'ENSG00000170476|ENST00000302125|MZB1'] 134706 12327 WWRRRKGE True NCI_RA007_Epitope_Rep5 1172.63154347676 1172.62990490379 54.066 3 -1.015778398052305 0.30736149759676196 1.0 ['ENST00000296754.7_2_5:96139638-96143632:-|nuORF'] 71470 17734 MKIFLPVL True H1975_Epitope_Rep2 959.5877962169099 959.58668993586 73.536 2 -1.0158156519629813 0.307410661980082 1.0 ['ENSG00000160932|ENST00000292494|LY6E'] 82292 16534 PTPLGVHTLL True PC9_epitope_Rep2 1046.61243074162 1046.61132993586 68.837 2 -1.0158348481024466 0.3074198831032233 1.0 ['ENST00000263856.8_1_2:86732845-86732923:-|nuORF'] 131464 25496 VVTVGVITVL True PC9_epitope_Rep1 998.6375828603 998.63703496793 103.06 1 -1.015858335687841 0.3074250109837441 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 25661 6632 FFAWHRSP True H1975_Epitope_Rep2 1046.5086343794198 1046.50752993586 30.418 2 -1.0158640656030764 0.3074250109837441 1.0 ['ENSG00000105472|ENST00000250340|CLEC11A'] 20547 12962 EQAQQIRLQAE True NCI_RA007_Epitope_Rep2 1312.6735274280397 1312.67242993586 55.043 2 -1.0159703080016889 0.30751411225902653 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 15504 3803 EAQRDSVL True PC9_epitope_Rep4 916.4614094034799 916.46030993586 20.791 2 -1.0160467964365105 0.30752333151385247 1.0 ['SPTBN4|p.A507E|1|0.35|ENSG00000160460|chr19:40503987-40503987|C/A|missense_variant'] 107809 9845 TAPMSGEK True NCI_RA007_Epitope_Rep3 819.3796539254699 819.37854993586 45.796 2 -1.0161191958823506 0.30754586362062997 1.0 ['nc|ENSG00000183169|Q3SYA9|POM121L1P'] 117311 7440 VAAGKALE True NCI_RA007_Epitope_Rep3 757.43340375049 757.43230993586 36.388 2 -1.0161775798378165 0.30757761329144256 1.0 ['ENST00000454928.5_2_2:110705383-110742349:+|nuORF', 'ENST00000606848.1_1_2:111144305-111145031:-|nuORF', 'ENST00000488671.1_1_2:111144305-111181647:-|nuORF'] 59297 15866 LGHCGCGR True NCI_RA007_Epitope_Rep3 801.33741227401 801.3368649679301 70.06 1 -1.0162096757418082 0.30757761329144256 1.0 ['ENST00000533173.1_1_8:145676645-145677062:-|nuORF'] 117881 10809 VAPQIPPH True NCI_RA007_Epitope_Rep2 857.47593726881 857.47484993586 46.647 2 -1.0163051761041895 0.3076318907333697 1.0 ['ENST00000535977.5_1_16:678253-678325:+|nuORF'] 86750 6702 QRLGFFPPA True PC9_epitope_Rep5 1031.5552502186697 1031.55414993586 30.75 2 -1.0163687550925156 0.3076318907333697 1.0 ['ENST00000474290.1_1_15:44069611-44069677:+|nuORF'] 63107 9677 LNNFQFGA True H1975_Epitope_Rep3 909.4344663796498 909.43336993586 42.241 2 -1.01639053685388 0.3076318907333697 1.0 ['ENST00000321348.8_1_2:172412719-172412857:+|nuORF'] 65669 4410 LSHAADLGTA True H1975_Epitope_Rep2 954.4770594676199 954.47596993586 22.071 2 -1.0164223520526812 0.30765441959531414 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2'] 28249 3753 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 19.701 2 -1.0164510282565276 0.3076687565725543 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 54959 5914 LAHRDPVVP True NCI_RA007_Epitope_Rep5 1002.5610638750999 1002.55996993586 29.434 2 -1.0164684852632542 0.3076687565725543 1.0 ['ENST00000524492.5_1_8:145581065-145581518:-|nuORF'] 123591 2020 VIKFLIIIA True PC9_epitope_Rep6 1028.6997891940398 1028.69868993586 11.693 2 -1.0164793699965298 0.3076687565725543 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 3526 5127 AGLVIPPEK True NCI_RA007_Epitope_Rep5 922.5487678559 922.54766993586 26.417 2 -1.0165052435382746 0.307677972418934 1.0 ['ENST00000425159.7_1_17:45567593-45569825:-|nuORF', 'nc|ENSG00000278845|Q9BRJ2|MRPL45', 'ENSG00000278845|ENST00000613675|MRPL45'] 86421 10211 QQQHQSSKKG True NCI_RA007_Epitope_Rep4 1154.57923312038 1154.57758490379 46.133 3 -1.0166210839203993 0.3077271214642263 1.0 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 134394 6636 WSWEWYLKEQK True NCI_RA007_Epitope_Rep2 1581.7616141564497 1581.7599749037902 30.424 3 -1.0166687934961305 0.3077363362883689 1.0 ['nc|ENSG00000154655|Q8NA19-2|L3MBTL4', 'ENSG00000154655|ENST00000317931|L3MBTL4', 'nc|ENSG00000154655|Q8NA19|L3MBTL4'] 65941 9866 LSLLLGGR True H1975_Epitope_Rep1 827.52288746123 827.5217899358599 42.883 2 -1.0167427916176137 0.30775066884957875 1.0 ['ENSG00000182768|ENST00000379095|NGRN', 'nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 119167 10152 VEKEKYSEIQQ True PC9_epitope_Rep5 1379.69325981311 1379.6916149037902 44.036 3 -1.0167585981685265 0.30775066884957875 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-3|ZFYVE26', 'ENST00000394455.6_1_14:68196461-68236507:-|nuORF'] 90839 23450 RKVLILGSW True PC9_epitope_Rep6 1070.66004964038 1070.6589499358602 103.31 2 -1.0167671166374215 0.30775066884957875 1.0 ['CAD|p.G402W|1|0.24|ENSG00000084774|chr2:27224440-27224440|G/T|missense_variant'] 115981 19337 TVQLSKPSL True PC9_epitope_Rep4 971.5651461960299 971.56404993586 82.488 2 -1.016840823435182 0.30778650339411684 1.0 ['PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion', 'nc|ENSG00000135365|Q96BD5-2|PHF21A', 'nc|ENSG00000135365|Q96BD5|PHF21A', 'ENSG00000135365|ENST00000676320|PHF21A', 'ENST00000527753.5_1_11:45959861-45986961:-|nuORF', 'ENST00000527401.5_1_11:45957138-45987102:-|nuORF'] 90675 10253 RKLHYQTYREM True H1975_Epitope_Rep3 1523.7667166202298 1523.76560993586 44.486 2 -1.016866807103358 0.30778752345840044 1.0 ['ENSG00000085840|ENST00000371568|ORC1'] 77053 26584 NVYVQYQSE True PC9_epitope_Rep5 1128.5087535187201 1128.50710490379 108.31 3 -1.0168981668052792 0.30778752345840044 1.0 ['ENSG00000169249|ENST00000307771|ZRSR2', 'nc|ENSG00000212643|Q15695|ZRSR2P1'] 118657 10124 VEAQDEITDM True H1975_Epitope_Rep3 1149.48596946881 1149.4848699358602 43.985 2 -1.016898461085404 0.30778752345840044 1.0 ['ENSG00000120051|ENST00000369704|CFAP58'] 57325 11091 LEGQEYKFR True H1975_Epitope_Rep1 1168.58767254576 1168.58656993586 47.625 2 -1.016922765981508 0.30779673649745787 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 59006 8639 LGALLRQGGDP True H1975_Epitope_Rep1 1095.6036569630699 1095.60254993586 38.159 2 -1.016958291958526 0.3078059492912757 1.0 ['nc|ENSG00000160117|Q8NAG6-1|ANKLE1', 'ENSG00000160117|ENST00000404085|ANKLE1', 'ENST00000404085.5_1_19:17392508-17397358:+|nuORF', 'ENST00000596099.1_1_19:17392905-17393816:+|nuORF', 'ENST00000596626.1_1_19:17392705-17393630:+|nuORF'] 128181 19494 VRSVILQGSG True NCI_RA007_Epitope_Rep4 1014.5821932424999 1014.58108993586 84.247 2 -1.0169967299441398 0.30781516183986374 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 65637 12670 LSGQNAQMPV True PC9_epitope_Rep2 1043.50697969691 1043.50588993586 54.042 2 -1.0170594827695045 0.30786430120979014 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 35503 9877 GTGGGYRMEAW True NCI_RA007_Epitope_Rep3 1183.50804232607 1183.50640490379 45.926 3 -1.017168241095854 0.3079226500219593 1.0 ['ENST00000416792.1_3_19:55944525-55949973:-|nuORF', 'ENSG00000187902|ENST00000376325|SHISA7'] 58459 12975 LEWVNSLQ True PC9_epitope_Rep3 987.5025459394699 987.50144993586 54.936 2 -1.017274366419212 0.3079226500219593 1.0 ['nc|ENSG00000181852|Q9H4P4-2|RNF41', 'ENSG00000181852|ENST00000345093|RNF41'] 56213 16472 LDPLDHRNFYS True H1975_Epitope_Rep3 1375.65206370747 1375.65096993586 68.849 2 -1.0173190246092594 0.3079318605270162 1.0 ['nc|ENSG00000133816|O94851-6|MICAL2', 'nc|ENSG00000133816|O94851-4|MICAL2', 'ENST00000531732.5_1_11:12183702-12229694:+|nuORF', 'nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 11453 17016 DFTPAEEFVP True PC9_epitope_Rep5 1150.51825557326 1150.51714993586 70.471 2 -1.017363980424422 0.3079902052114663 1.0 ['ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1', 'nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1'] 13605 7431 DPSAPDYLEYD True H1975_Epitope_Rep3 1283.51937777207 1283.51773490379 33.562 3 -1.0173866012232942 0.3079902052114663 1.0 ['ENSG00000138231|ENST00000260803|DBR1', 'nc|ENSG00000138231|Q9UK59-2|DBR1'] 33024 17559 GIYSRNWKP True PC9_epitope_Rep2 1119.58252759567 1119.5814299358601 72.813 2 -1.0174345313584041 0.3080260303687636 1.0 ['ENST00000400959.7_2_1:209929433-209933385:+|nuORF'] 83361 5210 QAQKQLLEYRT True NCI_RA007_Epitope_Rep5 1376.7412130650396 1376.7401099358601 26.736 2 -1.0175542624768306 0.3081017779197275 1.0 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B', 'ENST00000595900.1_1_19:16980720-16983386:+|nuORF'] 92775 18449 RRKQPLHP True H1975_Epitope_Rep2 1030.6148307834599 1030.6137299358602 76.559 2 -1.0175830074907986 0.30810789232058977 1.0 ['nc|ENSG00000152669|P22674-2|CCNO', 'ENSG00000152669|ENST00000282572|CCNO'] 100679 4680 SLQWRHRWDTP True PC9_epitope_Rep3 1480.7323797168397 1480.73074490379 23.094 3 -1.0176211995375175 0.30810789232058977 1.0 ['ENST00000593393.1_1_19:58918084-58918282:-|nuORF'] 58939 20895 LFVVWQIQ True PC9_epitope_Rep4 1031.5804023373498 1031.57930993586 88.53 2 -1.0176284376646385 0.30810789232058977 1.0 ['ENSG00000174038|ENST00000312292|C9orf131'] 16681 6960 EETSWPAFER True H1975_Epitope_Rep1 1250.5567663402996 1250.5556699358601 31.811 2 -1.017641029923725 0.30810789232058977 1.0 ['ENSG00000116191|ENST00000367635|RALGPS2', 'ENST00000480743.1_1_1:178855116-178863183:+|nuORF'] 23696 7647 EYHQMLYMRRI True NCI_RA007_Epitope_Rep2 1538.7486240279397 1538.7469649037903 34.371 3 -1.017666742101205 0.30810789232058977 1.0 ['PRAMEF19|p.L269H|1|0.55|ENSG00000204480|chr1:13370709-13370709|A/T|missense_variant'] 10980 14096 DCWHGASC True NCI_RA007_Epitope_Rep4 877.28470799481 877.28415496793 61.501 1 -1.0177004901438478 0.3081140059078692 1.0 ['ENST00000255499.2_2_X:105969946-105970231:+|nuORF'] 55348 5588 LASHHRLHTGE True NCI_RA007_Epitope_Rep5 1256.63741670284 1256.63630993586 28.182 2 -1.0177185484634057 0.3081140059078692 1.0 ['nc|ENSG00000293317|Q9H963|ZNF702P', 'ENSG00000197385|ENST00000360311|ZNF860'] 81606 9397 PRNVSEHIWEV True PC9_epitope_Rep5 1364.68369818892 1364.68260993586 41.1 2 -1.0177352344261221 0.3081140059078692 1.0 ['ENST00000478452.1_1_10:99221527-99222458:-|nuORF', 'ENST00000495415.5_1_10:99221527-99223714:-|nuORF'] 62330 12477 LLRGLWQRWRR True NCI_RA007_Epitope_Rep1 1538.9058678350598 1538.9042249037902 52.51 3 -1.0177432807953557 0.3081140059078692 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9'] 110810 20428 TKRKRKKQR True H1975_Epitope_Rep2 1227.8000057841898 1227.79837490379 84.641 3 -1.0178240312898066 0.3081140059078692 1.0 ['ENSG00000003436|ENST00000233156|TFPI'] 85000 16063 QIENFVPV True PC9_epitope_Rep6 944.4967322830398 944.49562993586 74.111 2 -1.017869665781332 0.3081631295322999 1.0 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII', 'FLII|p.Q663Rfs*4|2|0.17|ENSG00000177731|chr17:18248831-18248831|G/-|frameshift_variant', 'FLII|p.P700Gfs*9|1|0.31|ENSG00000177731|chr17:18248633-18248643|AGAACTCTGGG/-|frameshift_variant', 'ENST00000496727.1_1_17:18154365-18154758:-|nuORF'] 134637 18490 WWGGGSAP True NCI_RA007_Epitope_Rep5 816.3554877829599 816.35438993586 77.948 2 -1.0178996354531114 0.30816823449578884 1.0 ['ENST00000409185.5_1_2:131808281-131808602:-|nuORF'] 125744 12825 VNFTQEEWSLL True NCI_RA007_Epitope_Rep2 1364.6612314088397 1364.6601299358601 54.503 2 -1.017914510710269 0.30816823449578884 1.0 ['ENSG00000223547|ENST00000439326|ZNF844'] 118686 11890 VEASRLSQI True PC9_epitope_Rep3 1001.5505587610498 1001.54946993586 50.755 2 -1.0179253663191643 0.3081774395273956 1.0 ['ENST00000471073.1_1_22:21355994-21356078:-|nuORF'] 123439 17355 VIEKHVFVVE True NCI_RA007_Epitope_Rep5 1197.6757592741699 1197.67411490379 73.535 3 -1.017960726668061 0.30821936033207387 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27', 'SENP2-ANKRD27|1|fusion'] 124426 11804 VLELQTEL True PC9_epitope_Rep1 943.52261267771 943.52150993586 50.272 2 -1.0179918424276633 0.30821936033207387 1.0 ['nc|ENSG00000185963|Q8TD16|BICD2', 'ENSG00000185963|ENST00000356884|BICD2'] 74354 11386 NISCKASQDI True PC9_epitope_Rep2 1077.5124590001699 1077.51136993586 49.118 2 -1.0179955527506148 0.30821936033207387 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 58932 8568 LFVQVSLG True NCI_RA007_Epitope_Rep4 861.4960040070499 861.49490993586 39.741 2 -1.0180140990454147 0.30821936033207387 1.0 ['ENST00000585793.1_1_17:39914605-39919321:-|nuORF'] 43913 11432 ILDSFPMMPI True PC9_epitope_Rep3 1162.57663947986 1162.5749849037902 48.971 3 -1.018021645851793 0.30821936033207387 1.0 ['ENSG00000102763|ENST00000379310|VWA8', 'nc|ENSG00000102763|A3KMH1-3|VWA8', 'nc|ENSG00000102763|A3KMH1-2|VWA8'] 70751 23187 MECCCCCCEE True PC9_epitope_Rep4 1154.23393756886 1154.23282993586 97.417 2 -1.0180297537961651 0.30821936033207387 1.0 ['ENSG00000170775|ENST00000303921|GPR37'] 40571 12359 HSTSPAHKYYL True PC9_epitope_Rep4 1302.63568536734 1302.63458993586 55.345 2 -1.0180518378650172 0.30825517195503227 1.0 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1'] 81678 1598 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 8.9939 3 -1.018120239013586 0.3083400960527891 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 89971 2447 RGAGSKRKRR True PC9_epitope_Rep3 1170.71700443622 1170.71536490379 13.503 3 -1.018135525088434 0.3083400960527891 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 116088 12565 TVSGDRIVL True PC9_epitope_Rep1 958.5447451046199 958.54364993586 53.2 2 -1.0181569808286286 0.3083410935213516 1.0 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 44293 8452 ILWHTMKNYYR True NCI_RA007_Epitope_Rep1 1523.77073937151 1523.76910490379 36.876 3 -1.0181744866602978 0.3083410935213516 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 13478 3991 DPDQMKHQWL True H1975_Epitope_Rep3 1296.5921063032 1296.59100993586 20.476 2 -1.0181815010393749 0.3083410935213516 1.0 ['ENST00000529712.5_1_11:47690447-47736202:-|nuORF'] 38807 12477 HIANVERVPF True PC9_epitope_Rep4 1180.63529144452 1180.6336349037902 55.8 3 -1.0182619463963951 0.3083727983823764 1.0 ['ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14', 'ENST00000373807.5_1_9:124074589-124093809:+|nuORF'] 22699 7358 ETVMYPAYAK True NCI_RA007_Epitope_Rep1 1171.5583465634297 1171.55724993586 32.615 2 -1.0182743515805988 0.3083727983823764 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 98784 10253 SISQVAFTV True PC9_epitope_Rep3 950.5072969667399 950.50618993586 44.388 2 -1.0182873156147993 0.30839530150452954 1.0 ['ENSG00000169484|ENST00000641793|OR4K14'] 129137 20040 VTDCCEGY True NCI_RA007_Epitope_Rep4 888.2993549994399 888.29824993586 86.664 2 -1.0183237446063012 0.3084137013634852 1.0 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1', 'UMODL1|p.R88K|1|0.21|ENSG00000177398|chr21:42076191-42076191|G/A|missense_variant'] 18831 12611 ELEEDGTP True PC9_epitope_Rep6 888.3712569863999 888.37014993586 59.967 2 -1.0183956543663806 0.3084137013634852 1.0 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 100412 9434 SLNYPENY True H1975_Epitope_Rep3 998.4345259493 998.43342993586 41.289 2 -1.0184149057557201 0.3084146957886616 1.0 ['nc|ENSG00000183378|Q7RTZ1|OVCH2', 'ENSG00000183378|ENST00000533663|OVCH2'] 97220 9009 SFLDFWYTYVY True H1975_Epitope_Rep3 1502.67581884382 1502.6747299358601 39.649 2 -1.0184630681561548 0.3084146957886616 1.0 ['OR9G4|p.S75Y|1|0.25|ENSG00000172457|chr11:56743543-56743543|G/T|missense_variant'] 96473 11066 SEIYPQSHSY True H1975_Epitope_Rep3 1209.53021723929 1209.52912993586 47.657 2 -1.018472155961942 0.3084146957886616 1.0 ['ENSG00000137101|ENST00000259633|CD72'] 118002 9561 VASKSSSVVP True PC9_epitope_Rep2 959.52876068731 959.52766993586 42.121 2 -1.0185612909158304 0.30845559383354837 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 140140 24310 YVRRYSVD True PC9_epitope_Rep3 1056.53524305008 1056.5341499358601 98.821 2 -1.0185719206546382 0.30845559383354837 1.0 ['ENSG00000084090|ENST00000337288|STARD7'] 101244 20862 SLWGRPQGL True PC9_epitope_Rep3 1012.5454138109599 1012.54430993586 85.519 2 -1.0185804314974645 0.30845559383354837 1.0 ['ENSG00000010327|ENST00000321725|STAB1'] 78515 5458 PDKAPAGP True NCI_RA007_Epitope_Rep5 751.3864535580699 751.38534993586 27.682 2 -1.0187722772701466 0.3085312973850124 1.0 ['ENST00000572919.1_3_17:3512819-3513218:-|nuORF'] 44489 2615 INVEQAFQT True NCI_RA007_Epitope_Rep5 1048.5189242795998 1048.5178299358602 14.748 2 -1.0188174405687054 0.30855379540587635 1.0 ['ENSG00000075785|ENST00000265062|RAB7A'] 614 7914 AASPAGPPAPR True PC9_epitope_Rep1 990.5246783663799 990.52358993586 35.267 2 -1.0189368285852967 0.3086028942328155 1.0 ['ENSG00000131398|ENST00000477616|KCNC3'] 14428 9479 DTLGLDNTVFC True NCI_RA007_Epitope_Rep2 1196.53833939484 1196.53724993586 41.484 2 -1.01896473171367 0.308612090177562 1.0 ['ENSG00000135912|ENST00000392102|TTLL4'] 111548 8049 TLLYLYENLDP True H1975_Epitope_Rep3 1352.6863835275199 1352.68528993586 35.934 2 -1.0190294549881058 0.30862128587769 1.0 ['ENSG00000142185|ENST00000397928|TRPM2', 'nc|ENSG00000142185|O94759-2|TRPM2', 'nc|ENSG00000142185|O94759-3|TRPM2'] 111563 19382 TLMLQCLV True PC9_epitope_Rep5 919.4870961994699 919.48598993586 79.598 2 -1.019073094441367 0.3086304813332092 1.0 ['ENSG00000112139|ENST00000434837|MDGA1', 'nc|ENSG00000112139|Q8NFP4-2|MDGA1'] 25547 5676 FERDFEYKTPD True NCI_RA007_Epitope_Rep5 1445.6463096206896 1445.64466490379 28.522 3 -1.0192247468757283 0.3086621713282528 1.0 ['DMD|p.L1181F|1|0.39|ENSG00000198947|chrX:32454724-32454724|G/A|missense_variant'] 25594 10321 FESYGCYC True H1975_Epitope_Rep3 970.3200904440198 970.31898993586 44.751 2 -1.0192389532363444 0.3086621713282528 1.0 ['ENSG00000253117|ENST00000254627|OC90', 'nc|ENSG00000253117|Q02509-3|OC90'] 69133 8641 LVLLAQLGP True NCI_RA007_Epitope_Rep1 922.5851533646199 922.58404993586 37.613 2 -1.0192717348246898 0.3086641399029191 1.0 ['ENSG00000090006|ENST00000396819|LTBP4'] 48288 9667 KDLIAKVQA True PC9_epitope_Rep5 984.5967806774798 984.59568993586 42.151 2 -1.0192929182175294 0.3086641399029191 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 24718 9306 FAWAFLSLFR True PC9_epitope_Rep3 1256.6706143240797 1256.6689649037899 40.736 3 -1.0193309624306437 0.3086641399029191 1.0 ['ENSG00000185313|ENST00000449082|SCN10A'] 28140 17893 FRKKKREQ True NCI_RA007_Epitope_Rep3 1118.6672602791398 1118.6661699358601 78.42 2 -1.0193413679903711 0.3086641399029191 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 127432 21410 VQRVLCLR True PC9_epitope_Rep6 985.5855048011298 985.58440993586 95.227 2 -1.0193425062269117 0.3086641399029191 1.0 ['ENST00000381222.8_2_X:2404887-2405136:-|nuORF'] 549 6660 AAQQPHIAGV True PC9_epitope_Rep4 990.5246783663799 990.52358993586 32.791 2 -1.019350604091894 0.3086641399029191 1.0 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 64895 7414 LSASSKVP True PC9_epitope_Rep2 787.44396843419 787.44286993586 33.895 2 -1.0194088005416364 0.3087265280068089 1.0 ['nc|ENSG00000065361|P21860-2|ERBB3'] 111898 9915 TLRRQAKA True H1975_Epitope_Rep1 942.5722972651398 942.57120993586 43.074 2 -1.0194221611820755 0.3087357208399271 1.0 ['ENST00000490936.5_1_X:153583356-153583392:-|nuORF'] 130808 13722 VVEYAVRTDAW True NCI_RA007_Epitope_Rep2 1307.65100107831 1307.64990993586 58.021 2 -1.019486995734912 0.3087582116545653 1.0 ['ENSG00000234438|ENST00000432196|KBTBD13'] 26978 22929 FLKQLIVPLI True NCI_RA007_Epitope_Rep3 1182.77401676346 1182.77236490379 99.666 3 -1.0195272803315183 0.3087939999202117 1.0 ['ASAH2|p.F634L|1|0.04|ENSG00000188611|chr10:50196875-50196875|G/C|missense_variant'] 61241 6854 LLDQHMLKVHY True H1975_Epitope_Rep3 1395.73329123363 1395.73218993586 31.322 2 -1.0195812380654898 0.30882978723404253 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A'] 95554 11661 SASDVFEHL True NCI_RA007_Epitope_Rep4 1003.46107505031 1003.45996993586 51.812 2 -1.0196491185707774 0.30885227590058645 1.0 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10', 'nc|ENSG00000003400|Q92851-5|CASP10', 'nc|ENSG00000003400|Q92851|CASP10', 'nc|ENSG00000003400|Q92851-7|CASP10', 'nc|ENSG00000003400|Q92851-3|CASP10', 'ENST00000460140.5_1_2:202050494-202070750:+|nuORF', 'ENST00000484926.1_1_2:202050494-202050848:+|nuORF'] 36749 8341 GVPADQLRVIF True PC9_epitope_Rep6 1213.68190728377 1213.68025490379 41.733 3 -1.0196911902648433 0.3088614664503604 1.0 ['nc|ENSG00000185345|O60260-6|PRKN', 'nc|ENSG00000185345|O60260-7|PRKN', 'nc|ENSG00000185345|O60260-5|PRKN', 'nc|ENSG00000185345|O60260-8|PRKN', 'nc|ENSG00000185345|O60260-2|PRKN', 'ENSG00000185345|ENST00000366898|PRKN'] 125824 9867 VNLRSRNGW True NCI_RA007_Epitope_Rep5 1100.583924578 1100.5828299358602 44.599 2 -1.01972638451763 0.30889725143943725 1.0 ['nc|ENSG00000057294|Q99959|PKP2'] 29918 15424 FWLSFQKWNKF True NCI_RA007_Epitope_Rep1 1529.7819556782094 1529.78084993586 64.077 2 -1.0197808085190951 0.3089124971745403 1.0 ['ENST00000415861.2_1_6:109689555-109689642:-|nuORF'] 125344 16482 VLSKHLAI True PC9_epitope_Rep4 879.55418758951 879.55308993586 71.369 2 -1.0197826125923901 0.3089124971745403 1.0 ['nc|ENSG00000293412|O75343|GUCY1B2', 'ENST00000389600.6_1_13:51590304-51594849:-|nuORF'] 78612 22579 PDSLFSVVI True PC9_epitope_Rep1 975.52769805815 975.52660993586 91.658 2 -1.0198009873711829 0.3089124971745403 1.0 ['nc|ENSG00000102290|Q9BZA7-7|PCDH11X', 'nc|ENSG00000102290|Q9BZA7-2|PCDH11X', 'ENST00000361724.3_1_X:91090458-91134302:+|nuORF', 'nc|ENSG00000099715|Q9BZA8-3|PCDH11Y', 'nc|ENSG00000099715|Q9BZA8-2|PCDH11Y', 'nc|ENSG00000099715|Q9BZA8-4|PCDH11Y', 'nc|ENSG00000102290|Q9BZA7-6|PCDH11X', 'ENSG00000099715|ENST00000698851|PCDH11Y', 'nc|ENSG00000102290|Q9BZA7-5|PCDH11X', 'nc|ENSG00000102290|Q9BZA7-4|PCDH11X', 'nc|ENSG00000102290|Q9BZA7-3|PCDH11X', 'nc|ENSG00000102290|Q9BZA7-8|PCDH11X', 'nc|ENSG00000099715|Q9BZA8|PCDH11Y', 'ENSG00000102290|ENST00000682573|PCDH11X'] 60035 16624 LHRQQRQRKFL True PC9_epitope_Rep4 1508.8800470100398 1508.8789499358602 71.913 2 -1.0198562363491392 0.3089124971745403 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 29616 11125 FVLLKEGAQEP True NCI_RA007_Epitope_Rep2 1229.66558851329 1229.66448993586 47.854 2 -1.0198795456363945 0.3089124971745403 1.0 ['nc|ENSG00000147255|Q8N6C5-2|IGSF1', 'ENSG00000147255|ENST00000361420|IGSF1', 'nc|ENSG00000147255|Q8N6C5-4|IGSF1'] 131417 24054 VVTLLSNY True PC9_epitope_Rep2 907.50148331031 907.50038993586 98.026 2 -1.0198806847207211 0.3089124971745403 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 23493 16846 EWDAFDLKTK True NCI_RA007_Epitope_Rep2 1251.6135529404298 1251.61244993586 70.261 2 -1.0198934984187968 0.3089216859460178 1.0 ['ENST00000460138.5_1_6:7882234-7882414:-|nuORF'] 60134 23795 LHVRGRRHRLQ True PC9_epitope_Rep1 1426.8494155880999 1426.84830993586 96.325 2 -1.020009898985252 0.30895335850662126 1.0 ['ZFR2|p.R698Gfs*6|1|0.19|ENSG00000105278|chr19:3816685-3816685|G/-|frameshift_variant', 'ENSG00000105278|ENST00000262961|ZFR2'] 23672 20279 EYGSIIAFF True NCI_RA007_Epitope_Rep4 1045.51204799401 1045.5114749679299 87.773 1 -1.02003263733473 0.30895335850662126 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant'] 82508 13130 PVETFLEF True PC9_epitope_Rep1 980.4854988929999 980.48440993586 55.372 2 -1.0200685538615024 0.3089942165791398 1.0 ['UBR4|p.S5156L|1|0.3|ENSG00000127481|chr1:19076760-19076760|G/A|missense_variant'] 84163 5207 QERMFTIDP True H1975_Epitope_Rep3 1135.5331944447498 1135.53208993586 25.12 2 -1.0200795191188612 0.3089942165791398 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2'] 91335 25184 RMKKKKKLLPF True PC9_epitope_Rep6 1415.91628140639 1415.91463490379 112.06 3 -1.020087926104333 0.3089942165791398 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 102177 4502 SPSAARDPYDQ True NCI_RA007_Epitope_Rep2 1205.53127986845 1205.53077496793 22.142 1 -1.0201494243905338 0.30901259023890876 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant'] 13475 10473 DPDLKTILNI True H1975_Epitope_Rep2 1140.63903941228 1140.6379499358602 45.302 2 -1.020189766290161 0.30901259023890876 1.0 ['SPAG17|p.E1152K|1|0.18|ENSG00000155761|chr1:118031847-118031847|C/T|missense_variant'] 42033 11106 IEDYDVIAS True PC9_epitope_Rep1 1023.4760564081099 1023.4749499358601 47.605 2 -1.020230356698619 0.3090350713924858 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 112244 6176 TLYFERRTEFF True H1975_Epitope_Rep1 1507.7459640923096 1507.7443049037902 28.825 3 -1.0202668515293554 0.3090626287871738 1.0 ['ENSG00000128655|ENST00000286063|PDE11A', 'nc|ENSG00000128655|Q9HCR9-4|PDE11A', 'nc|ENSG00000128655|Q9HCR9-3|PDE11A', 'nc|ENSG00000128655|Q9HCR9-2|PDE11A', 'NFE2L2-PDE11A|3|fusion', 'NFE2L2-PDE11A|1|fusion', 'NFE2L2-PDE11A|2|fusion'] 75065 17096 NMLEAVHTI True PC9_epitope_Rep5 1026.51681610462 1026.51570993586 70.781 2 -1.0202757228722534 0.3090626287871738 1.0 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK', 'TTK|p.A401Ffs*17|1|0.11|ENSG00000112742|chr6:80022416-80022416|G/TT|frameshift_variant', 'TTK|p.W628L|1|0.23|ENSG00000112742|chr6:80035376-80035376|G/T|missense_variant'] 65144 7653 LSDRSPSLI True NCI_RA007_Epitope_Rep3 986.53965972418 986.53856993586 37.226 2 -1.0202885291961372 0.3090626287871738 1.0 ['ENST00000379731.4_1_9:33113141-33113378:-|nuORF'] 80148 4454 PKPSFFDFEGK True H1975_Epitope_Rep3 1297.6342883850095 1297.6331899358602 22.256 2 -1.0203887789887007 0.30914335850260555 1.0 ['ENSG00000230124|ENST00000367595|ACBD6'] 98530 16502 SILNNPIVKA True PC9_epitope_Rep6 1067.63389446219 1067.63278993586 75.905 2 -1.020409409919941 0.30914335850260555 1.0 ['ENSG00000162664|ENST00000340281|ZNF326', 'nc|ENSG00000162664|Q5BKZ1-3|ZNF326', 'ENST00000394583.7_1_1:90470639-90493257:+|nuORF'] 95536 8116 SAQTHFAA True PC9_epitope_Rep2 831.3875161872298 831.38640993586 36.576 2 -1.0204220445879515 0.30914335850260555 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 6180 7017 APPSCPCPWLW True H1975_Epitope_Rep2 1255.55182171435 1255.5501749037899 31.916 3 -1.020495404813567 0.3091443231818363 1.0 ['ENST00000366911.9_1_6:161556936-161557113:-|nuORF'] 61513 6994 LLFYETYGKN True NCI_RA007_Epitope_Rep3 1246.6233893481397 1246.6222899358602 34.619 2 -1.0205107107641642 0.3091443231818363 1.0 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2'] 91336 25245 RMKKKKKLLPF True PC9_epitope_Rep6 1415.91628140639 1415.91463490379 112.4 3 -1.0205214264706617 0.3091443231818363 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 97429 22848 SGGGGGGGGD True NCI_RA007_Epitope_Rep2 676.24124587636 676.24069496793 95.221 1 -1.0205391958894785 0.309171872923036 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1'] 34576 5413 GQGATANVFR True PC9_epitope_Rep1 1019.5148419586699 1019.51374993586 25.655 2 -1.0205643613111046 0.309171872923036 1.0 ['ENSG00000183735|ENST00000331710|TBK1'] 126807 5245 VPSSHSVPSA True H1975_Epitope_Rep2 966.4770594676199 966.47596993586 25.241 2 -1.0205811325683227 0.309171872923036 1.0 ['ENST00000480273.5_1_20:62318929-62319157:+|nuORF'] 19649 17640 ELRSGIIR True NCI_RA007_Epitope_Rep1 942.5610638750999 942.5605149679301 72.751 1 -1.0205968923467301 0.3091810556818333 1.0 ['nc|ENSG00000151726|P33121-2|ACSL1', 'nc|ENSG00000151726|P33121-3|ACSL1', 'ENSG00000151726|ENST00000281455|ACSL1', 'FKBP1A-ACSL1|1|fusion'] 78737 18941 PEGALISKCS True PC9_epitope_Rep6 1003.5008316873101 1003.49972993586 85.502 2 -1.0206124509804153 0.3092035304125904 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1-ZNF346|6|fusion', 'NSD1-C11orf58|2|fusion', 'NSD1-ZNF346|5|fusion', 'NSD1-ZNF346|4|fusion', 'NSD1-C11orf58|1|fusion', 'NSD1-ZNF346|8|fusion', 'NSD1-ZNF346|3|fusion', 'NSD1-ZNF346|7|fusion', 'NSD1|p.C2138Sfs*12|1|0.47|ENSG00000165671|chr5:177292108-177292108|G/-|frameshift_variant'] 80230 5980 PLATSHQQYFY True NCI_RA007_Epitope_Rep4 1353.6353510141703 1353.63424993586 29.622 2 -1.0206447682170428 0.309204492589885 1.0 ['ENSG00000105889|ENST00000678116|STEAP1B', 'ENST00000483679.1_1_7:22532171-22534501:-|nuORF', 'ENST00000475789.1_1_7:89789075-89791404:+|nuORF', 'ENSG00000164647|ENST00000297205|STEAP1', 'nc|ENSG00000105889|Q6NZ63-2|STEAP1B', 'nc|ENSG00000105889|Q6NZ63|STEAP1B'] 38965 25453 HIVSLILG True PC9_epitope_Rep2 850.5276384885 850.52654993586 103.59 2 -1.0206507316039402 0.309204492589885 1.0 ['ENST00000336034.8_1_19:42703119-42703434:-|nuORF'] 100529 13792 SLPSPHDVL True PC9_epitope_Rep2 963.50254593947 963.50144993586 58.335 2 -1.0206659241788216 0.309204492589885 1.0 ['ENSG00000255690|ENST00000539664|TRIL'] 43597 21492 IIHLRRHS True PC9_epitope_Rep6 1030.61483078346 1030.6137299358602 95.542 2 -1.0206794645053718 0.3092136743048541 1.0 ['ENSG00000186448|ENST00000344387|ZNF197'] 22944 5154 EVHEKASFT True H1975_Epitope_Rep2 1046.50327421546 1046.5021699358601 24.902 2 -1.0206990106846163 0.3092361471084706 1.0 ['ENSG00000076201|ENST00000265562|PTPN23'] 73093 8503 NDNSLNHEYLP True PC9_epitope_Rep3 1314.5840437173 1314.5829499358601 37.667 2 -1.020734234494683 0.30924217857047925 1.0 ['ENSG00000120053|ENST00000370508|GOT1', 'nc|ENSG00000120053|P17174-2|GOT1', 'ENST00000471741.1_1_10:101180368-101190322:-|nuORF'] 64928 15238 LSCHCHSC True PC9_epitope_Rep4 888.3040635404002 888.30296993586 66.543 2 -1.020760309376481 0.30924217857047925 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 112420 13418 TNISQAIEML True NCI_RA007_Epitope_Rep2 1118.56416021986 1118.56306993586 56.835 2 -1.0207731311358348 0.30924217857047925 1.0 ['nc|ENSG00000069974|P51159-2|RAB27A', 'ENSG00000069974|ENST00000336787|RAB27A'] 61672 7336 LLHQTQSAL True PC9_epitope_Rep5 1009.55564414149 1009.55454993586 33.178 2 -1.0208310346010059 0.30924217857047925 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2'] 80808 9549 PLTEEETR True H1975_Epitope_Rep2 973.47163973401 973.4710949679301 41.703 1 -1.020831529778974 0.30924217857047925 1.0 ['ENSG00000132603|ENST00000254940|NIP7', 'nc|ENSG00000132603|Q9Y221-2|NIP7'] 41182 5450 HYYRPLTERMT True PC9_epitope_Rep5 1465.7136184182098 1465.71196490379 25.975 3 -1.0209166067608664 0.30929122974894674 1.0 ['ENSG00000147183|ENST00000276127|CPXCR1'] 100319 3587 SLMFTRPEMP True NCI_RA007_Epitope_Rep2 1207.57295108175 1207.5718499358602 18.601 2 -1.0209686381614325 0.3093627483553725 1.0 ['ENST00000425595.5_1_12:54357896-54360399:-|nuORF', 'ENST00000424518.5_1_12:54357877-54360106:-|nuORF'] 74783 6303 NLMQEYPDD True H1975_Epitope_Rep3 1123.44919003727 1123.44808993586 29.249 2 -1.0209726214693056 0.3093627483553725 1.0 ['nc|ENSG00000075391|Q9UJF2|RASAL2', 'ENSG00000075391|ENST00000367649|RASAL2'] 15948 9882 EDTGWLLFPV True H1975_Epitope_Rep1 1175.58627556343 1175.5851699358602 42.944 2 -1.0210177826105287 0.3093719267469367 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 130084 22188 VTQPEKLL True PC9_epitope_Rep1 926.5436824754598 926.54258993586 90.166 2 -1.0210894760806568 0.3093943944609087 1.0 ['nc|ENSG00000211796|A0A0A6YYK6|TRAV16'] 119010 21220 VEFSPYEVGFL True PC9_epitope_Rep1 1285.6230549949698 1285.6219499358601 86.446 2 -1.021126074370264 0.30941686157771636 1.0 ['ENSG00000159337|ENST00000290472|PLA2G4D', 'nc|ENSG00000159337|Q86XP0-2|PLA2G4D'] 110447 9364 TIPEAEIPPA True NCI_RA007_Epitope_Rep5 1036.5440763982797 1036.5429699358601 42.66 2 -1.021180882491946 0.30945261731052903 1.0 ['ENSG00000145309|ENST00000273936|CABS1'] 32232 12907 GFGGGGYGGF True NCI_RA007_Epitope_Rep3 874.3609670862198 874.3604149679301 58.036 1 -1.0212724994608764 0.30951495016611297 1.0 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 9326 5698 AVSPDRDVD True PC9_epitope_Rep5 972.4512386426 972.4501499358599 26.912 2 -1.02137785903356 0.3095772813650317 1.0 ['ENST00000515074.1_1_4:163244087-163244557:+|nuORF'] 55177 14262 LAPEMIDSRVL True PC9_epitope_Rep1 1242.6642086143 1242.66256490379 59.682 3 -1.0214041902218294 0.3095864561739223 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF'] 31738 10924 GEKPYSCGEC True NCI_RA007_Epitope_Rep5 1071.40013166987 1071.3990299358602 48.659 2 -1.0214577778785563 0.3096139791375988 1.0 ['ZNF229|p.C717Mfs*13|1|0.18|ENSG00000278318|chr19:44428632-44428633|-/T|frameshift_variant', 'nc|ENSG00000278318|Q9UJW7-2|ZNF229', 'ENSG00000278318|ENST00000614049|ZNF229'] 63667 15863 LPPKNVYYY True H1975_Epitope_Rep2 1155.59644632431 1155.5953499358602 66.216 2 -1.0214705980208354 0.3096139791375988 1.0 ['ENSG00000186094|ENST00000371839|AGBL4', 'nc|ENSG00000186094|Q5VU57-2|AGBL4'] 28128 5422 FRINCCLLQK True NCI_RA007_Epitope_Rep4 1236.6471190815198 1236.64602993586 27.431 2 -1.0214821326352823 0.3096139791375988 1.0 ['ENST00000477239.1_1_20:23350773-23351022:+|nuORF'] 108415 6165 TEEEEEEEDD True H1975_Epitope_Rep2 1252.4102808155599 1252.40918993586 28.686 2 -1.021500669470547 0.30963644094823006 1.0 ['ENSG00000225830|ENST00000355832|ERCC6', 'nc|ENSG00000225830|P0DP91|ERCC6'] 117875 11712 VAPPRVAAL True PC9_epitope_Rep3 892.5494365622399 892.54832993586 50.068 2 -1.0215445661691744 0.3096854777628659 1.0 ['PRSS38|p.N40*|1|0.38|ENSG00000185888|chr1:227815834-227815849|AACCAGGGAATCTCCC/-|frameshift_variant', 'ENSG00000185888|ENST00000366757|PRSS38'] 45075 7407 IQRMVWPP True H1975_Epitope_Rep3 1025.5480566632498 1025.54694993586 33.468 2 -1.02157285098006 0.3097079380265221 1.0 ['ENST00000512062.5_1_16:69497047-69497263:+|nuORF'] 111683 15450 TLPLRYCCL True PC9_epitope_Rep4 1080.54600805792 1080.54490993586 67.36 2 -1.0216243513874415 0.3097262822216317 1.0 ['ENST00000591903.1_2_17:26976053-26976209:-|nuORF'] 66970 11161 LSYYRYQLNLF True H1975_Epitope_Rep3 1478.7558005000199 1478.75470993586 48.028 2 -1.0216388740697175 0.3097262822216317 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1'] 2193 11367 AENFFLYKDI True PC9_epitope_Rep4 1258.6233893481399 1258.6217549037901 51.496 3 -1.021640775447819 0.3097272232039648 1.0 ['ENST00000464184.5_1_X:129473893-129492795:+|nuORF'] 104435 7841 SSKYPEDDPDY True H1975_Epitope_Rep2 1314.5251914285 1314.52354490379 35.11 3 -1.021686684112196 0.3097272232039648 1.0 ['ENSG00000163798|ENST00000326019|SLC4A1AP', 'nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP'] 107906 11149 TAVIVGTIL True H1975_Epitope_Rep2 885.55351888317 885.55242993586 47.922 2 -1.0217126294275602 0.3097272232039648 1.0 ['ENST00000502864.5_1_5:36608606-36630112:+|nuORF', 'nc|ENSG00000079215|P43003-2|SLC1A3', 'ENSG00000079215|ENST00000265113|SLC1A3'] 78304 9979 PASHYYKYKQQ True NCI_RA007_Epitope_Rep2 1411.68844921619 1411.68734993586 43.445 2 -1.0217424931352435 0.30973639455782315 1.0 ['ENSG00000171435|ENST00000339824|KSR2', 'nc|ENSG00000171435|Q6VAB6-2|KSR2', 'ENST00000545002.1_1_12:117955650-118115004:-|nuORF'] 65668 14599 LSGYINYLDRN True NCI_RA007_Epitope_Rep1 1326.6568147347398 1326.6557099358602 60.836 2 -1.0218473030777735 0.30975885205606857 1.0 ['ENSG00000071127|ENST00000499869|WDR1', 'nc|ENSG00000071127|O75083-3|WDR1', 'ENST00000502962.5_1_4:10077004-10094774:-|nuORF', 'ENST00000504739.5_1_4:10086058-10094651:-|nuORF', 'ENST00000515743.5_1_4:10078742-10093271:-|nuORF', 'ENST00000506246.5_1_4:10086058-10094494:-|nuORF'] 7649 3475 ASLTIWKKMG True NCI_RA007_Epitope_Rep2 1133.6267009067699 1133.62504490379 18.173 3 -1.0219328345685363 0.30982116759227274 1.0 ['nc|ENSG00000087088|Q07812-6|BAX', 'nc|ENSG00000087088|Q07812-4|BAX', 'nc|ENSG00000087088|Q07812-7|BAX', 'nc|ENSG00000087088|Q07812-8|BAX', 'ENST00000513545.5_1_19:49458896-49464890:+|nuORF', 'ENSG00000087088|ENST00000345358|BAX'] 5255 16900 ALQWARYHWRR True H1975_Epitope_Rep1 1541.81163309705 1541.8105299358601 70.416 2 -1.0219500319333055 0.3098221047177457 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D'] 62883 8413 LMRMPKMPELR True PC9_epitope_Rep3 1400.7454532237998 1400.74381490379 37.326 3 -1.0219648719738827 0.3098221047177457 1.0 ['DDX55|p.L458M|1|0.18|ENSG00000111364|chr12:123619470-123619470|C/A|missense_variant'] 79241 17493 PGGHGRCS True NCI_RA007_Epitope_Rep5 769.32895576529 769.32784993586 74.078 2 -1.0219762386878368 0.3098221047177457 1.0 ['ENST00000358187.2_1_10:106075300-106075366:-|nuORF'] 68274 9941 LTRKDIHY True H1975_Epitope_Rep2 1044.5716285588 1044.5705299358601 43.227 2 -1.0219929905554355 0.30982715786956466 1.0 ['ENST00000381337.6_1_16:20747308-20748193:-|nuORF'] 15793 6215 EDGKESTSSDC True H1975_Epitope_Rep2 1156.4190121078002 1156.41790993586 28.875 2 -1.0219988477034219 0.30982715786956466 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 135177 18434 YASSRREAY True PC9_epitope_Rep1 1101.52032126193 1101.51922993586 75.697 2 -1.0220886783470242 0.3098363269210331 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 131270 6083 VVQKFLAWDK True NCI_RA007_Epitope_Rep4 1232.6917436914798 1232.69008490379 30.014 3 -1.0221283272690627 0.3098587807049008 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 46480 8920 ITNYKDLR True H1975_Epitope_Rep1 1021.5556441414899 1021.55454993586 39.215 2 -1.022217845828265 0.3098771172367984 1.0 ['ENSG00000131459|ENST00000253778|GFPT2'] 87271 9233 QSSKREWKPLE True NCI_RA007_Epitope_Rep2 1386.7255630008997 1386.72446993586 40.525 2 -1.0222524253279301 0.3098771172367984 1.0 ['nc|ENSG00000070214|Q8WWI5-3|SLC44A1', 'nc|ENSG00000070214|Q8WWI5-2|SLC44A1', 'ENSG00000070214|ENST00000374720|SLC44A1', 'SLC44A1|p.A288Pfs*14|1|0.25|ENSG00000070214|chr9:105361290-105361290|G/-|frameshift_variant'] 39737 15804 HPWQVRHSRHK True NCI_RA007_Epitope_Rep1 1466.7755819415 1466.7744899358602 65.57 2 -1.0222730842126475 0.30988628513736116 1.0 ['ENST00000360862.9_2_16:3534932-3535735:+|nuORF'] 123590 1662 VIKFLIIIA True PC9_epitope_Rep6 1028.6997891940398 1028.69868993586 9.6193 2 -1.0222781638026937 0.3098954527943462 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 58439 14155 LEWGHVLLVP True PC9_epitope_Rep2 1161.65462990677 1161.65299490379 59.717 3 -1.02236077819199 0.3099270712947834 1.0 ['ENSG00000183208|ENST00000329600|GDPGP1'] 46469 13901 ITNLKRRYSFR True H1975_Epitope_Rep1 1452.8313654821197 1452.83026993586 58.622 2 -1.0223671527880442 0.3099270712947834 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 65349 7216 LSENNFMDI True H1975_Epitope_Rep1 1081.47501086229 1081.47390993586 32.767 2 -1.022383415805674 0.3099362380446334 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2', 'NAPG-PIEZO2|1|fusion', 'nc|ENSG00000154864|Q9H5I5-3|PIEZO2'] 103203 14527 SQQSSLLTV True PC9_epitope_Rep6 961.5080252427299 961.5074749679301 67.768 1 -1.0224201153181118 0.3099454045509491 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'ENST00000583043.5_1_18:67684852-67806940:-|nuORF'] 134122 7007 WRDEKERHRDR True PC9_epitope_Rep3 1581.7872688240097 1581.78562490379 31.965 3 -1.0225663411686279 0.31003015288976266 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 37835 23107 HDKRKKSRS True PC9_epitope_Rep1 1140.64758746372 1140.64594490379 93.682 3 -1.0225692271802826 0.31003015288976266 1.0 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU', 'ENST00000506535.1_1_4:185631525-185635040:-|nuORF'] 16440 11644 EELMFLMEC True NCI_RA007_Epitope_Rep3 1143.46504042555 1143.46339490379 52.922 3 -1.022624847434932 0.3100351995749485 1.0 ['ENST00000579647.1_1_18:2652767-2653031:-|nuORF'] 46089 17264 ISYSHDIDP True PC9_epitope_Rep1 1045.4716397340098 1045.4705499358602 71.225 2 -1.0227010791858435 0.3100351995749485 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion'] 64931 16072 LSCHCHSC True PC9_epitope_Rep4 888.3040635404002 888.30296993586 69.756 2 -1.0227116228566842 0.3100535284976158 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 120940 6351 VGEKEKIS True NCI_RA007_Epitope_Rep4 888.4916469025999 888.49054993586 31.036 2 -1.0227522581697654 0.3100535284976158 1.0 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 129004 15476 VSYLKKISL True PC9_epitope_Rep6 1049.64848189717 1049.64738993586 71.701 2 -1.0228577823248672 0.31011170290480683 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 12756 19095 DLGVLGKQ True H1975_Epitope_Rep1 828.4705175352001 828.4699649679301 79.585 1 -1.0228758070247972 0.31011170290480683 1.0 ['ENSG00000079739|ENST00000371084|PGM1', 'nc|ENSG00000079739|P36871-2|PGM1'] 56020 21568 LDKEVRAVFL True PC9_epitope_Rep1 1188.6866583110398 1188.68556993586 87.782 2 -1.0229039835764133 0.310135996600085 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2'] 119820 12772 VEVMCIVP True PC9_epitope_Rep1 888.4448970343199 888.44378993586 54.001 2 -1.022941053930696 0.310135996600085 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF', 'ENST00000511019.1_1_5:14480069-14481814:+|nuORF'] 64138 4164 LQEPFLMEQLP True H1975_Epitope_Rep2 1343.6795243252698 1343.6778749037899 21.118 3 -1.022951873358233 0.310135996600085 1.0 ['nc|ENSG00000137727|Q9P2F6-4|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-2|ARHGAP20', 'nc|ENSG00000137727|Q9P2F6-3|ARHGAP20', 'ENSG00000137727|ENST00000683387|ARHGAP20'] 60868 9752 LKPEPTKTF True PC9_epitope_Rep1 1059.5964463243101 1059.5953499358602 42.37 2 -1.022956046328071 0.310135996600085 1.0 ['nc|ENSG00000240021|Q5T0J7-3|TEX35', 'nc|ENSG00000240021|Q5T0J7-5|TEX35', 'nc|ENSG00000240021|Q5T0J7-2|TEX35', 'TEX35|p.P224Afs*8|2|0.21|ENSG00000240021|chr1:178522405-178522406|-/T|frameshift_variant', 'ENSG00000240021|ENST00000319416|TEX35'] 237 19485 AAGAPNLVLAA True PC9_epitope_Rep5 966.5498304850599 966.54928496793 80.002 1 -1.022956851141116 0.310135996600085 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 5707 6582 APARLPAAPA True PC9_epitope_Rep2 933.5396001545298 933.53850993586 30.732 2 -1.023026658735441 0.310135996600085 1.0 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 57199 16359 LEEVFHNL True PC9_epitope_Rep1 999.50254593947 999.50144993586 67.745 2 -1.0230305350116464 0.310135996600085 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 134260 20286 WRRRRPGRR True NCI_RA007_Epitope_Rep5 1294.7707713445798 1294.76966993586 84.971 2 -1.02306403198888 0.31015843924724756 1.0 ['ENSG00000110665|ENST00000381153|C11orf21'] 64915 17030 LSCHCHSC True PC9_epitope_Rep1 888.3040635404002 888.30296993586 70.33 2 -1.023156079266928 0.31018180369450604 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 52642 13747 KQELLVEIQR True NCI_RA007_Epitope_Rep2 1254.72958575218 1254.7284899358601 58.118 2 -1.023182663085542 0.31018180369450604 1.0 ['ENST00000462117.5_1_19:48972629-48975663:+|nuORF', 'ENSG00000105443|ENST00000452733|CYTH2', 'nc|ENSG00000105443|Q99418|CYTH2'] 71786 1567 MNMKKSHEVQA True NCI_RA007_Epitope_Rep1 1301.62202653249 1301.62039490379 8.282 3 -1.023196976940248 0.31018180369450604 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'ENSG00000127720|ENST00000248306|METTL25'] 93304 20328 RRRYLRRKER True NCI_RA007_Epitope_Rep4 1487.9021794369498 1487.90053490379 88.007 3 -1.0231977463421509 0.31018180369450604 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 111573 17850 TLNDKKQWINK True H1975_Epitope_Rep1 1386.76194850962 1386.76084993586 74.331 2 -1.023293508824871 0.3102184449903725 1.0 ['HP|p.K345Sfs*31|2|0.17|ENSG00000257017|chr16:72060701-72060701|T/-|frameshift_variant', 'ENSG00000257017|ENST00000355906|HP', 'ENST00000561927.3_16:72090108-72091373:+|nuORF', 'ENST00000562488.1_16:72088551-72092313:+|nuORF', 'ENSG00000261701|ENST00000540303|HPR', 'nc|ENSG00000261701|P00739-2|HPR'] 116030 10930 TVRFVNTL True PC9_epitope_Rep2 948.53926580136 948.53816993586 47.363 2 -1.0233012023911632 0.3102184449903725 1.0 ['nc|ENSG00000163406|Q16348-2|SLC15A2', 'ENSG00000163406|ENST00000489711|SLC15A2'] 49056 14037 KFLNLQNQHEK True NCI_RA007_Epitope_Rep5 1397.7415474182096 1397.7404499358602 60.685 2 -1.0233021363956678 0.3102184449903725 1.0 ['CCDC73|p.E339Q|2|0.39|ENSG00000186714|chr11:32642007-32642007|C/G|missense_variant'] 6056 21615 APMGALWGL True PC9_epitope_Rep3 914.4684093602199 914.46730993586 88.439 2 -1.02331399812752 0.3102184449903725 1.0 ['nc|ENSG00000155229|Q96T76-5|MMS19', 'nc|ENSG00000155229|Q96T76-9|MMS19', 'ENSG00000155229|ENST00000438925|MMS19', 'nc|ENSG00000155229|Q96T76-8|MMS19', 'nc|ENSG00000155229|Q96T76-7|MMS19', 'nc|ENSG00000155229|Q96T76-6|MMS19'] 42754 19384 IFERFLNKLCL True PC9_epitope_Rep5 1394.7744277696197 1394.77279490379 79.606 3 -1.0233326437668684 0.3102276047061323 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 14449 10806 DTNSRRIYRVK True H1975_Epitope_Rep1 1406.7742445288202 1406.7731499358601 46.53 2 -1.0233893858407936 0.31024592340787166 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 88736 17340 RDDFYEWE True NCI_RA007_Epitope_Rep3 1158.4618033263 1158.46015490379 76.094 3 -1.0234110374031218 0.31024592340787166 1.0 ['ENSG00000120658|ENST00000690772|ENOX1', 'nc|ENSG00000120658|Q8TC92-2|ENOX1'] 22080 4245 ESSRRLAEIQE True NCI_RA007_Epitope_Rep1 1316.6684420475997 1316.6668049037899 20.624 3 -1.0234489618445508 0.31025508239387056 1.0 ['ENSG00000101997|ENST00000376227|CCDC22'] 132297 19435 VYLLINSQV True PC9_epitope_Rep5 1047.5964463243101 1047.5953499358602 79.807 2 -1.023470053943874 0.31029079803478954 1.0 ['ENSG00000198691|ENST00000370225|ABCA4'] 25625 8631 FEVLAFKNR True H1975_Epitope_Rep1 1122.61857875122 1122.61748993586 38.127 2 -1.0236180954109106 0.3103764190400319 1.0 ['ENSG00000182601|ENST00000331351|HS3ST4'] 63263 16203 LPALPSPK True H1975_Epitope_Rep1 821.50108938749 821.5005449679301 67.671 1 -1.0236561891658151 0.3103764190400319 1.0 ['ENST00000593284.5_1_19:47987540-47987672:+|nuORF'] 137364 24530 YLKIKPLLK True NCI_RA007_Epitope_Rep1 1114.7478020156198 1114.74670993586 101.62 2 -1.023658387151643 0.3103764190400319 1.0 ['MYH4|p.F838L|1|0.39|ENSG00000264424|chr17:10454732-10454732|G/C|missense_variant'] 97428 22389 SGGGGGGGGD True H1975_Epitope_Rep1 676.24124587636 676.24069496793 93.151 1 -1.0236750506462287 0.3103764190400319 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1'] 110563 14422 TIRYRKIGP True PC9_epitope_Rep5 1102.66111226954 1102.6600099358602 60.473 2 -1.0236760435906298 0.3103764190400319 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 117570 5537 VAGITDKK True H1975_Epitope_Rep1 830.48616759934 830.48506993586 26.362 2 -1.0237008548918567 0.31038145438612796 1.0 ['HMCN1|p.M2371I|1|0.51|ENSG00000143341|chr1:186055643-186055643|G/T|missense_variant'] 100849 5603 SLSEAVQR True NCI_RA007_Epitope_Rep5 888.4664947839199 888.46538993586 28.24 2 -1.0237178805846017 0.31038145438612796 1.0 ['ENST00000285039.11_1_18:47367738-47367792:-|nuORF'] 117664 7740 VAIVLENRSS True H1975_Epitope_Rep1 1086.6033226099 1086.6022299358601 34.732 2 -1.023733452859267 0.3103823685608072 1.0 ['nc|ENSG00000065000|O14617-4|AP3D1', 'nc|ENSG00000065000|O14617|AP3D1', 'ENSG00000065000|ENST00000643116|AP3D1', 'nc|ENSG00000065000|O14617-3|AP3D1', 'nc|ENSG00000065000|O14617-2|AP3D1', 'ENST00000585652.5_1_19:2109741-2111012:-|nuORF', 'ENST00000589223.5_1_19:2102174-2111012:-|nuORF'] 53006 22596 KRRKRSRKV True PC9_epitope_Rep4 1212.8003401373599 1212.7987049037902 95.147 3 -1.023740892615457 0.3103823685608072 1.0 ['ENST00000469758.5_1_10:120085736-120095927:-|nuORF'] 41179 16573 HYYHYRKFAEK True H1975_Epitope_Rep1 1540.75753183552 1540.75642993586 69.123 2 -1.0237470156345903 0.3103823685608072 1.0 ['PDIA5|p.G482R|1|0.17|ENSG00000065485|chr3:123161420-123161420|G/A|missense_variant'] 19425 23491 ELPKRRRQRG True PC9_epitope_Rep2 1294.7694339318998 1294.76832993586 95.829 2 -1.0237772677928836 0.3103915242760983 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B'] 85635 11259 QLPWWQWLKWR True H1975_Epitope_Rep1 1625.86193733441 1625.8608499358602 48.284 2 -1.0237903420405572 0.31040067974828073 1.0 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 124374 7182 VLDWEGEDILD True H1975_Epitope_Rep3 1302.5979624459399 1302.59686993586 32.6 2 -1.023948853431535 0.31046293960676025 1.0 ['nc|ENSG00000131089|O43307-3|ARHGEF9', 'nc|ENSG00000131089|O43307-2|ARHGEF9', 'nc|ENSG00000131089|O43307|ARHGEF9', 'ENSG00000131089|ENST00000671741|ARHGEF9'] 128725 7349 VSPPAAPAAP True PC9_epitope_Rep6 876.4705175351999 876.46942993586 37.445 2 -1.0240029001994568 0.3104720938877383 1.0 ['nc|ENSG00000115419|O94925-3|GLS', 'ENSG00000115419|ENST00000320717|GLS', 'nc|ENSG00000115419|O94925-2|GLS', 'ENST00000479552.1_1_2:191745810-191759998:+|nuORF', 'ENST00000496170.1_1_2:191745882-191760452:+|nuORF'] 83847 10223 QEGDYGRWTIS True H1975_Epitope_Rep1 1310.5891290977397 1310.58802993586 44.265 2 -1.0240303336933878 0.3105343511450382 1.0 ['ENSG00000042088|ENST00000335725|TDP1'] 28247 3212 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 17.588 2 -1.0241070002825048 0.3105966067493296 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 110210 15547 TIDWYRFFCLW True H1975_Epitope_Rep1 1548.7223921967598 1548.72128993586 65.082 2 -1.0241401706155924 0.31059841767110924 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'POLQ|p.S1786Ifs*30|1|0.19|ENSG00000051341|chr3:121487574-121487574|C/-|frameshift_variant', 'POLQ|p.L1430Ffs*5|1|0.16|ENSG00000051341|chr3:121488641-121488642|-/A|frameshift_variant', 'POLQ|p.M713Rfs*14|2|0.15|ENSG00000051341|chr3:121498492-121498492|A/-|frameshift_variant', 'POLQ|p.Y758Rfs*36|1|0.31|ENSG00000051341|chr3:121496811-121496815|CATAA/-|frameshift_variant'] 85815 9773 QLYYYKHYL True PC9_epitope_Rep5 1289.6444591458899 1289.64280490379 42.564 3 -1.0241562792728325 0.31059841767110924 1.0 ['ENST00000490134.1_1_9:108337313-108359001:+|nuORF', 'nc|ENSG00000106692|O75072-2|FKTN', 'ENSG00000106692|ENST00000357998|FKTN'] 61340 7903 LLEEWLLMRFQ True NCI_RA007_Epitope_Rep2 1476.77990707288 1476.7782749037901 35.374 3 -1.0242048252108258 0.31059841767110924 1.0 ['ENST00000326685.11_1_5:148638855-148639278:+|nuORF'] 20540 7259 EQALLEEIERH True NCI_RA007_Epitope_Rep2 1365.6888431390098 1365.6877499358602 32.856 2 -1.0242057974507963 0.31059841767110924 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 35085 24148 GRLASKKLRFL True H1975_Epitope_Rep3 1287.8139245128298 1287.81226490379 100.61 3 -1.024207423669534 0.31059841767110924 1.0 ['ENST00000508198.5_1_4:152375928-152403748:+|nuORF'] 73001 7763 NDEDEPQK True H1975_Epitope_Rep3 973.3988687165701 973.39776993586 34.845 2 -1.0242345308709828 0.31059841767110924 1.0 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5'] 60799 21360 LKHIMLLFPP True NCI_RA007_Epitope_Rep2 1207.71512198835 1207.71346490379 88.387 3 -1.0242564735508877 0.3106075690600401 1.0 ['ENST00000564509.5_1_17:75085187-75089351:+|nuORF'] 71398 15281 MIGFFHAL True PC9_epitope_Rep1 934.4734947406599 934.47238993586 63.6 2 -1.024348885566435 0.3106217479027291 1.0 ['nc|ENSG00000251608|P0DN82|OR12D1'] 90692 18465 RKLSFKRKRFL True PC9_epitope_Rep4 1477.93577098101 1477.93411490379 79.095 3 -1.0243606518724058 0.3106217479027291 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'nc|ENSG00000006607|O94887-3|FARP2', 'FARP2|p.H590Qfs*52|1|0.12|ENSG00000006607|chr2:241463425-241463426|-/A|frameshift_variant', 'nc|ENSG00000006607|O94887-2|FARP2', 'ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'KIAA0247-FARP1|1|fusion'] 79438 13280 PGPIDNTK True H1975_Epitope_Rep3 840.43413202648 840.4335849679301 56.338 1 -1.0243801139631306 0.3106217479027291 1.0 ['nc|ENSG00000077254|Q8TEY7|USP33', 'ENST00000533928.1_1_1:78163515-78167102:-|nuORF', 'ENSG00000077254|ENST00000370794|USP33'] 58473 5405 LEYLDLSHNK True NCI_RA007_Epitope_Rep5 1230.6244519772997 1230.6228149037902 27.478 3 -1.0243945992042662 0.31062677533250155 1.0 ['ENSG00000174125|ENST00000308979|TLR1'] 134139 9292 WRERWQEYFTF True NCI_RA007_Epitope_Rep2 1646.76301113878 1646.7613649037899 40.754 3 -1.0243972725853476 0.31062677533250155 1.0 ['ENST00000367103.3_1_1:206907394-206907589:+|nuORF'] 119226 18289 VEKRLLGF True PC9_epitope_Rep5 960.5756513100798 960.57454993586 75.363 2 -1.0244442432229333 0.3106327064226272 1.0 ['ENST00000609131.1_1_9:4676681-4679417:-|nuORF'] 11336 5516 DEYKGNLK True NCI_RA007_Epitope_Rep2 965.4818104948899 965.48070993586 26.072 2 -1.0244514225935013 0.3106327064226272 1.0 ['nc|ENSG00000121897|O43766-2|LIAS', 'UBE2K-LIAS|2|fusion', 'nc|ENSG00000121897|O43766-3|LIAS', 'ENSG00000121897|ENST00000640888|LIAS', 'UBE2K-LIAS|1|fusion'] 24843 10163 FDDDNGDDDD True PC9_epitope_Rep3 1141.33197092521 1141.3308699358602 44.045 2 -1.0244750939226133 0.3106327064226272 1.0 ['WASHC2C|p.D455N|1|0.19|ENSG00000172661|chr10:45755058-45755058|G/A|missense_variant'] 78606 16709 PDSFNIPGSS True PC9_epitope_Rep5 1019.45598966987 1019.45488993586 69.277 2 -1.0244757359750591 0.3106327064226272 1.0 ['nc|ENSG00000084693|Q8NDL9-2|AGBL5', 'ENSG00000084693|ENST00000360131|AGBL5'] 94272 7722 RWSEWFFFIFK True NCI_RA007_Epitope_Rep2 1591.7976057423496 1591.7959649037903 34.663 3 -1.0244783530558161 0.3106327064226272 1.0 ['ENST00000407008.7_1_17:26369807-26369933:+|nuORF'] 80386 16342 PLGVRGRG True H1975_Epitope_Rep3 810.4824196315799 810.48187496793 68.334 1 -1.0245671995046626 0.31065100537527374 1.0 ['ENST00000257897.7_2_12:58119581-58120334:-|nuORF'] 45152 12569 IRDHFMEML True PC9_epitope_Rep1 1190.55763537078 1190.55598490379 53.216 3 -1.0245953389405005 0.31065100537527374 1.0 ['ENST00000478571.1_1_1:186368103-186380944:+|nuORF', 'nc|ENSG00000157181|Q5SWX8-4|ODR4', 'nc|ENSG00000157181|Q5SWX8-2|ODR4', 'ENSG00000157181|ENST00000287859|ODR4'] 53001 26594 KRRILLLIP True NCI_RA007_Epitope_Rep1 1120.7808334794 1120.7797299358601 110.14 2 -1.024690363882044 0.310691723735202 1.0 ['nc|ENSG00000162594|Q5VWK5-5|IL23R', 'nc|ENSG00000162594|Q5VWK5-6|IL23R', 'nc|ENSG00000162594|Q5VWK5-2|IL23R', 'ENSG00000162594|ENST00000347310|IL23R'] 8454 11497 ATSRASPPAL True PC9_epitope_Rep1 969.5243440132099 969.52324993586 49.102 2 -1.024717149566733 0.310691723735202 1.0 ['ENSG00000186212|ENST00000334306|SOWAHB'] 20222 5343 ENTSIRIGP True NCI_RA007_Epitope_Rep3 985.5192586327698 985.51816993586 28.025 2 -1.0247191234387598 0.310691723735202 1.0 ['ENSG00000105613|ENST00000251472|MAST1'] 75210 4918 NPEERIQIEN True NCI_RA007_Epitope_Rep2 1240.6047791618796 1240.60312490379 23.75 3 -1.024764645000102 0.31070087194256063 1.0 ['CNTN6|p.S419Vfs*33|1|0.22|ENSG00000134115|chr3:1329816-1329817|-/A|frameshift_variant', 'CNTN6|p.G369W|1|0.41|ENSG00000134115|chr3:1327478-1327478|G/T|missense_variant', 'ENSG00000134115|ENST00000446702|CNTN6'] 74776 17504 NLMDKSHC True NCI_RA007_Epitope_Rep4 946.4000721002201 946.39896993586 75.778 2 -1.0247970615836899 0.3107100199071002 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 52282 13034 KNYEEVLRL True PC9_epitope_Rep5 1162.6346227381798 1162.63297490379 55.139 3 -1.0248525231722745 0.3107855237488554 1.0 ['VPS4A|p.A28V|1|0.16|ENSG00000132612|chr16:69316069-69316069|C/T|missense_variant'] 131356 11033 VVSASEYQILQ True H1975_Epitope_Rep2 1235.63976768827 1235.6386699358602 47.468 2 -1.024873610910097 0.3108079413950526 1.0 ['ENST00000478946.1_1_2:74071889-74072120:+|nuORF'] 45591 15305 ISGNPVTLT True PC9_epitope_Rep2 900.4916469026001 900.49109496793 64.153 1 -1.0248929819964034 0.31082210868555504 1.0 ['nc|ENSG00000143297|Q96RD9-4|FCRL5', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'FCRL5|p.Q200K|1|0.5|ENSG00000143297|chr1:157544508-157544508|G/T|missense_variant', 'ENST00000481082.1_1_1:157512505-157514867:-|nuORF'] 17961 21771 EIFEVDFRDP True PC9_epitope_Rep1 1265.5928174958499 1265.59172993586 88.576 2 -1.024904442026904 0.31082210868555504 1.0 ['nc|ENSG00000075826|Q9NQW1-3|SEC31B', 'nc|ENSG00000075826|Q9NQW1-2|SEC31B', 'nc|ENSG00000075826|Q9NQW1-4|SEC31B', 'nc|ENSG00000075826|Q9NQW1-5|SEC31B', 'ENSG00000075826|ENST00000370345|SEC31B'] 98183 13553 SIDNREELL True PC9_epitope_Rep5 1087.55095268387 1087.54984993586 57.155 2 -1.0249349014851943 0.31082210868555504 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D'] 11086 8878 DEAM[Oxidation]RRLQERM[Oxidation] True NCI_RA007_Epitope_Rep5 1465.6765820473697 1465.67548993586 40.813 2 -1.0249520610838612 0.3108312543128616 1.0 ['nc|ENSG00000161618|Q8IZ83-3|ALDH16A1', 'ENSG00000161618|ENST00000293350|ALDH16A1', 'ENST00000599652.5_1_19:49965164-49969478:+|nuORF'] 19544 7156 ELQSGEHAPDL True H1975_Epitope_Rep3 1194.55168095986 1194.5505899358602 32.498 2 -1.02503392085369 0.3108669400321138 1.0 ['ENSG00000179715|ENST00000546455|PCED1B'] 88471 21029 QYWTKWLLRLE True H1975_Epitope_Rep3 1534.8296341466196 1534.8285299358602 87.832 2 -1.0250777568360065 0.3108811040339703 1.0 ['ENSG00000125871|ENST00000377710|MGME1'] 52233 7632 KNGLKFPT True NCI_RA007_Epitope_Rep3 903.51780208079 903.51670993586 37.148 2 -1.0250800482680895 0.3108811040339703 1.0 ['nc|ENSG00000189157|Q6ZV65-1|FAM47E', 'ENSG00000189157|ENST00000424749|FAM47E'] 47011 7256 IVQQKREADEQ True NCI_RA007_Epitope_Rep1 1342.6840921117398 1342.6829899358602 32.214 2 -1.0250805437316148 0.3108811040339703 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 64752 27344 LRRRKRRRIA True PC9_epitope_Rep5 1379.91743557827 1379.91580490379 112.09 3 -1.0250978880291828 0.31089024827165246 1.0 ['ENST00000496567.5_1_9:97782205-97782394:+|nuORF'] 114937 5015 TTFSWDDQK True NCI_RA007_Epitope_Rep2 1126.49310345458 1126.49200993586 24.13 2 -1.0251360446429276 0.3108911416591476 1.0 ['nc|ENSG00000135472|Q9BWQ8-2|FAIM2', 'ENSG00000135472|ENST00000320634|FAIM2'] 362 15631 AALAALALA True NCI_RA007_Epitope_Rep5 783.48543932335 783.48434993586 66.832 2 -1.0251363065418557 0.3108911416591476 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 78268 9587 PARPPTPAQV True PC9_epitope_Rep5 1032.5716285587998 1032.5705299358601 41.837 2 -1.0251488160614823 0.3108911416591476 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2'] 103997 20944 SRRRRRPPP True H1975_Epitope_Rep2 1176.7064397525198 1176.70534993586 86.706 2 -1.0252012361550817 0.3109226972374811 1.0 ['ENST00000400000.6_1_18:9914029-9931821:+|nuORF'] 37836 23058 HDKRKKSRS True PC9_epitope_Rep2 1140.64758746372 1140.64594490379 94.184 3 -1.025208628354396 0.3109226972374811 1.0 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU', 'ENST00000506535.1_1_4:185631525-185635040:-|nuORF'] 102222 7013 SPSPRQLL True PC9_epitope_Rep4 896.50796567308 896.50686993586 34.222 2 -1.0252618173402646 0.3109858033700411 1.0 ['ENST00000389279.7_1_8:22462563-22463297:+|nuORF'] 109486 9719 TGWLCLHS True PC9_epitope_Rep3 915.4272728242299 915.42616993586 42.337 2 -1.0252706842437136 0.3109858033700411 1.0 ['ENSG00000173208|ENST00000308666|ABCD2'] 116169 10286 TVTIHNEVLR True PC9_epitope_Rep1 1180.65642081192 1180.6553299358602 44.45 2 -1.0252773211269048 0.3109858033700411 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 40906 23611 HVSLPLHA True NCI_RA007_Epitope_Rep4 872.48683630568 872.48572993586 102.42 2 -1.0253074849854265 0.3109858033700411 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF'] 82722 6668 PVPSWWQTGAR True PC9_epitope_Rep4 1283.6411051009502 1283.63944490379 32.823 3 -1.0253556728473283 0.31099494500537345 1.0 ['ENST00000267425.7_1_14:24769093-24769264:+|nuORF'] 99872 18061 SLHHLIEAL True PC9_epitope_Rep5 1031.5763795860698 1031.5752899358602 74.485 2 -1.0253764899555815 0.31101735392453433 1.0 ['ENST00000564212.1_1_16:48657430-48705855:+|nuORF'] 130364 6044 VTVEAEPRP True PC9_epitope_Rep2 996.5240096600398 996.52290993586 28.64 2 -1.0255400021030483 0.31113263370172345 1.0 ['ENST00000396987.7_1_8:41479703-41480342:+|nuORF'] 28248 3468 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 18.619 2 -1.0255833933509202 0.3111417730251811 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 363 15724 AALAALALA True NCI_RA007_Epitope_Rep5 783.48543932335 783.48434993586 67.2 2 -1.025605506938353 0.31116417910447763 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 13615 15807 DPSSLRDAL True PC9_epitope_Rep5 972.4876241513199 972.48652993586 65.791 2 -1.0256515876225494 0.3111824561869005 1.0 ['ENSG00000072080|ENST00000168148|SPP2'] 136022 15878 YFPFLHKIL True NCI_RA007_Epitope_Rep3 1176.66955169492 1176.66844993586 70.112 2 -1.0256691006834429 0.3111824561869005 1.0 ['chr12:69359236-69362788|157|12.36|0.22|5.84|+|2|TE_info:HAL1,HAL1_dup16795,L1,LINE,donor,-,69358807,69359236|None,YEATS4|1'] 23102 11426 EVLQRGEAL True PC9_epitope_Rep5 1013.5505587610498 1013.54946993586 48.948 2 -1.0257037197466463 0.3111874660051208 1.0 ['ENSG00000265808|ENST00000578049|SEC22B', 'NOTCH2-SEC22B|1|fusion'] 90139 7799 RGWPHAAI True NCI_RA007_Epitope_Rep4 906.4824196315799 906.48132993586 36.682 2 -1.0257122029379415 0.3111874660051208 1.0 ['ENST00000541607.1_1_9:37575600-37576341:-|nuORF'] 86075 5767 QPNPNLNV True NCI_RA007_Epitope_Rep4 894.45593010022 894.45482993586 28.802 2 -1.0257586012734958 0.31121900744219366 1.0 ['ENST00000452556.5_1_2:214162070-215102915:+|nuORF', 'nc|ENSG00000144451|Q8N0X2-2|SPAG16', 'ENSG00000144451|ENST00000331683|SPAG16'] 14206 20810 DSTTGEQRQVV True H1975_Epitope_Rep3 1218.5840437173001 1218.5824049037901 86.935 3 -1.0257612350533458 0.31121900744219366 1.0 ['nc|ENSG00000067842|Q16720-8|ATP2B3', 'nc|ENSG00000067842|Q16720-7|ATP2B3', 'nc|ENSG00000067842|Q16720-6|ATP2B3', 'nc|ENSG00000067842|Q16720-3|ATP2B3', 'nc|ENSG00000067842|Q16720-5|ATP2B3', 'nc|ENSG00000067842|Q16720-2|ATP2B3', 'ATP2B3|p.P1175Rfs*12|1|0.2|ENSG00000067842|chrX:153580153-153580153|C/-|frameshift_variant', 'nc|ENSG00000067842|Q16720-4|ATP2B3', 'ENSG00000067842|ENST00000263519|ATP2B3'] 115960 17567 TVPYHCVTP True PC9_epitope_Rep1 1015.47970231991 1015.47860993586 72.364 2 -1.0257932896034172 0.311272949166932 1.0 ['ENSG00000196531|ENST00000454682|NACA', 'nc|ENSG00000196531|E9PAV3-2|NACA'] 5542 10118 ANGELKKVEDL True PC9_epitope_Rep6 1214.65066672514 1214.6495699358602 49.531 2 -1.0258544192834451 0.311272949166932 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 81815 23609 PSFSYESFTFP True H1975_Epitope_Rep3 1307.5710194221097 1307.56992993586 98.485 2 -1.0258667872961096 0.311272949166932 1.0 ['HEXA|p.P212S|2|0.35|ENSG00000213614|chr15:72351171-72351171|G/A|missense_variant'] 104534 8323 SSSDDADLPP True H1975_Epitope_Rep2 1002.4141844275399 1002.41308993586 36.964 2 -1.0259078565087962 0.31131775130660866 1.0 ['ENSG00000185862|ENST00000330927|EVI2B', 'nc|ENSG00000185862|P34910-2|EVI2B'] 124946 12203 VLMAQKEGKR True NCI_RA007_Epitope_Rep3 1158.65431263694 1158.65320993586 55.133 2 -1.0259097308677847 0.31131775130660866 1.0 ['ZNF160|p.V321Sfs*36|1|0.4|ENSG00000170949|chr19:53069573-53069573|C/-|frameshift_variant', 'ZNF160|p.A769Pfs*4|1|0.29|ENSG00000170949|chr19:53068233-53068233|C/-|frameshift_variant', 'ENSG00000170949|ENST00000683776|ZNF160'] 22478 3928 ETHIRVPA True PC9_epitope_Rep6 921.50321464581 921.50210993586 21.801 2 -1.0259166822596522 0.3113227569374436 1.0 ['ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 56035 8190 LDKLRGQDP True NCI_RA007_Epitope_Rep1 1040.56145779792 1040.56036993586 35.854 2 -1.0259325751097412 0.3113227569374436 1.0 ['nc|ENSG00000166839|Q495B1-6|ANKDD1A'] 139227 14209 YSYVIQNL True PC9_epitope_Rep4 998.50729696674 998.50618993586 62.564 2 -1.0259737745200674 0.31135103589145025 1.0 ['ENST00000449089.6_1_9:132657774-132657972:-|nuORF'] 62495 9728 LLSQNRAL True PC9_epitope_Rep1 913.5345147740899 913.53340993586 42.276 2 -1.0259972202148249 0.31135103589145025 1.0 ['nc|ENSG00000183530|Q5THK1-2|PRR14L', 'PRR14L|p.P1996Qfs*42|1|0.37|ENSG00000183530|chr22:31703563-31703563|G/-|frameshift_variant', 'nc|ENSG00000183530|Q5THK1-4|PRR14L', 'ENSG00000183530|ENST00000327423|PRR14L', 'nc|ENSG00000183530|Q5THK1-3|PRR14L'] 42696 7882 IEWDTDQWK True NCI_RA007_Epitope_Rep1 1219.5509526838698 1219.54984993586 34.652 2 -1.0260112544210864 0.31135103589145025 1.0 ['ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A', 'ENSG00000176809|ENST00000584306|LRRC37A3', 'ENST00000572638.1_1_17:44625595-44632942:+|nuORF'] 127488 16256 VQTLRWQRWQR True H1975_Epitope_Rep3 1555.84841252859 1555.84730993586 67.984 2 -1.0260127532455414 0.31135103589145025 1.0 ['ENSG00000167895|ENST00000318430|TMC8'] 111864 16064 TLRLFEEL True PC9_epitope_Rep4 1019.5651461960299 1019.56404993586 69.724 2 -1.0260332911380223 0.31135103589145025 1.0 ['ENSG00000158863|ENST00000289921|FHIP2B', 'ENST00000462914.3_1_8:21957359-21958496:+|nuORF', 'ENST00000491733.2_1_8:21958038-21958496:+|nuORF'] 131234 23414 VVPRGGLRG True H1975_Epitope_Rep3 909.5508335445699 909.54972993586 97.728 2 -1.0260359763784919 0.31135103589145025 1.0 ['ENST00000610187.1_1_9:137000377-137000500:-|nuORF'] 119221 17185 VEKQLKLRERP True NCI_RA007_Epitope_Rep2 1394.83578215622 1394.83468993586 71.585 2 -1.026066688291829 0.3113569145479383 1.0 ['ENST00000511562.5_1_4:164415926-164433975:+|nuORF'] 42218 10245 IEGTLGVL True NCI_RA007_Epitope_Rep2 800.4643695255999 800.46382496793 44.443 1 -1.0260880174718812 0.3113569145479383 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 57648 12399 LELWVNYYIRW True NCI_RA007_Epitope_Rep2 1553.80308504561 1553.80198993586 52.837 2 -1.0260996719392774 0.3113569145479383 1.0 ['nc|ENSG00000171100|Q13496-2|MTM1', 'ENSG00000171100|ENST00000370396|MTM1'] 100992 9918 SLSYHRMWMVR True NCI_RA007_Epitope_Rep1 1464.7118445964 1464.7107499358601 42.583 2 -1.02610745059467 0.3113569145479383 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 28215 10850 FRRFFQDRWNQ True H1975_Epitope_Rep1 1598.7854779188597 1598.7843899358602 46.693 2 -1.0261154407851338 0.3113569145479383 1.0 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G', 'nc|ENSG00000006283|O43497-30|CACNA1G', 'nc|ENSG00000006283|O43497-29|CACNA1G', 'nc|ENSG00000006283|O43497-28|CACNA1G', 'nc|ENSG00000006283|O43497-32|CACNA1G', 'nc|ENSG00000006283|O43497-31|CACNA1G', 'nc|ENSG00000006283|O43497-27|CACNA1G'] 891 7052 ADLTGIKW True H1975_Epitope_Rep3 902.48616759934 902.48506993586 32.09 2 -1.0263500717276877 0.31157824933687 1.0 ['ENSG00000108510|ENST00000397786|MED13', 'MED13|p.H1262Pfs*53|1|0.19|ENSG00000108510|chr17:61982217-61982218|GT/-|frameshift_variant'] 2932 4676 AFFPVHFQEF True NCI_RA007_Epitope_Rep2 1267.6025943339098 1267.60093490379 22.815 3 -1.0264336156352258 0.3116536915956022 1.0 ['ENSG00000033100|ENST00000035307|CHPF2', 'nc|ENSG00000033100|Q9P2E5-2|CHPF2'] 65344 21170 LSEMRHYQRLP True PC9_epitope_Rep3 1428.72960283552 1428.72850993586 86.718 2 -1.0264641821810114 0.3116628206148378 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-4|GREB1L', 'ENST00000578368.5_1_18:18963479-19048745:+|nuORF', 'ENST00000584446.5_1_18:18963479-19034595:+|nuORF'] 218 7589 AAFRAYIIT True PC9_epitope_Rep2 1024.5705659296398 1024.56946993586 34.56 2 -1.0264747759442812 0.31168521146373485 1.0 ['GXYLT1-TMEM117|1|fusion'] 64282 15951 LQLNLRPVDV True PC9_epitope_Rep5 1165.68190728377 1165.68080993586 66.344 2 -1.0265816475499245 0.3117034679397918 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 103225 22603 SQRRHRAV True PC9_epitope_Rep3 1008.5689432201998 1008.56784993586 92.211 2 -1.0265819432088943 0.3117034679397918 1.0 ['nc|ENSG00000106328|Q9NQT6-2|FSCN3', 'ENSG00000106328|ENST00000265825|FSCN3'] 120540 12773 VGAAGRNA True NCI_RA007_Epitope_Rep5 714.3772858566999 714.37673496793 55.81 1 -1.026668205771297 0.3117523804471793 1.0 ['PYROXD2|p.M563V|1|0.36|ENSG00000119943|chr10:98383857-98383857|T/C|missense_variant'] 68215 6239 LTQLSFLCLDP True NCI_RA007_Epitope_Rep1 1248.64241054056 1248.64075490379 28.302 3 -1.02669344454441 0.31178803028896523 1.0 ['ENST00000476549.6_2_6:26405834-26406223:+|nuORF'] 134603 15507 WWDIYYTLFEK True NCI_RA007_Epitope_Rep1 1562.7445671099797 1562.74397496793 64.403 1 -1.026755698133338 0.3117971568003395 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 42149 7279 IEESKKKR True NCI_RA007_Epitope_Rep1 1016.5978433066399 1016.59674993586 32.305 2 -1.026801749851032 0.3118195440862497 1.0 ['ENSG00000198765|ENST00000369522|SYCP1'] 114537 10868 TSHPPPVP True PC9_epitope_Rep1 830.4286527232199 830.42754993586 46.689 2 -1.0268711383633515 0.31182866993767405 1.0 ['ENST00000341319.7_1_3:183209591-183209699:-|nuORF'] 118483 8709 VDRTNHQRERR True NCI_RA007_Epitope_Rep2 1465.76105407617 1465.75994993586 38.523 2 -1.0269890743508816 0.31189582697943324 1.0 ['nc|ENSG00000112038|P35372-8|OPRM1'] 30873 17332 GARKQRRPF True NCI_RA007_Epitope_Rep4 1114.6471935408997 1114.6460899358601 75.058 2 -1.0270016610718604 0.31189582697943324 1.0 ['ENST00000573622.1_1_12:9795539-9795680:+|nuORF'] 89973 1281 RGAGSKRKRR True PC9_epitope_Rep5 1170.71700443622 1170.71536490379 7.1095 3 -1.0270181608310043 0.31189582697943324 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 15311 2241 EAITAFMDHKK True H1975_Epitope_Rep3 1289.64380752289 1289.64217490379 11.987 3 -1.0270387128620173 0.31190495133529583 1.0 ['ENSG00000170684|ENST00000303809|ZNF296'] 87802 15678 QVIEPHDIS True PC9_epitope_Rep2 1036.5189242796 1036.5178299358602 65.582 2 -1.027072457125027 0.3119405953722734 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 12828 11774 DLKLTIWGPEI True PC9_epitope_Rep6 1283.7125387057097 1283.7114499358602 56.453 2 -1.0271424673201563 0.3119894982497083 1.0 ['nc|ENSG00000213995|Q8IW45-2|NAXD'] 42923 22418 IFWKLVKW True PC9_epitope_Rep4 1118.6640723916598 1118.66296993586 94.462 2 -1.0271871910882577 0.3120251402203747 1.0 ['ENST00000255305.10_3_13:21436952-21442818:-|nuORF'] 67994 6634 LTLTWLYFWWE True H1975_Epitope_Rep1 1556.770387935 1556.76874490379 30.573 3 -1.0272431285042685 0.31202598780164414 1.0 ['ENSG00000158555|ENST00000336898|GDPD5', 'ENST00000528031.1_1_11:75167699-75188792:-|nuORF'] 90405 23692 RIMKMRKTLS True NCI_RA007_Epitope_Rep4 1262.7315174118198 1262.73040993586 102.75 2 -1.0272656315367723 0.31202598780164414 1.0 ['nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'nc|ENSG00000158290|Q13620-3|CUL4B'] 112644 4774 TPEQLDCIHD True NCI_RA007_Epitope_Rep3 1169.5022882392898 1169.50118993586 25.741 2 -1.0272693942788973 0.31202598780164414 1.0 ['BACH1|p.I569Sfs*11|1|0.53|ENSG00000156273|chr21:29329623-29329624|TT/-|frameshift_variant', 'ENSG00000156273|ENST00000286800|BACH1'] 34220 17187 GPKAKKSGSK True NCI_RA007_Epitope_Rep3 986.5872786229398 986.58618993586 75.497 2 -1.027365054927592 0.3120666109807353 1.0 ['nc|ENSG00000118307|Q6TDU7-3|DNAI7', 'ENSG00000118307|ENST00000395987|DNAI7'] 122147 17596 VGRIHRHL True NCI_RA007_Epitope_Rep5 986.5886160356199 986.5880649679301 74.463 1 -1.0273668224550965 0.3120666109807353 1.0 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'ENST00000511348.1_1_4:100870420-100870579:-|nuORF'] 30155 5546 FYRTYMLFKN True NCI_RA007_Epitope_Rep1 1381.6852784120495 1381.68364490379 25.643 3 -1.027388994466439 0.3120666109807353 1.0 ['nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3', 'ENSG00000139508|ENST00000266943|SLC46A3', 'nc|ENSG00000139508|Q7Z3Q1-2|SLC46A3'] 60030 17289 LHRPRITR True NCI_RA007_Epitope_Rep3 1047.6413798844699 1047.6402899358602 75.891 2 -1.0274368973850037 0.3120757318625371 1.0 ['ENSG00000141384|ENST00000269142|TAF4B'] 55548 8961 LAYVLGDP True PC9_epitope_Rep3 846.4487194614599 846.44762993586 39.416 2 -1.0275602583580974 0.31211136890951274 1.0 ['ENSG00000173890|ENST00000355897|GPR160'] 22599 6410 ETPQTVPA True PC9_epitope_Rep3 841.4181476091699 841.41704993586 29.681 2 -1.0275644838670845 0.3121130569659689 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 78870 20535 PESSLYKYP True PC9_epitope_Rep1 1082.5284263341398 1082.52732993586 83.801 2 -1.0275838458949 0.3121130569659689 1.0 ['nc|ENSG00000157554|P11308-2|ERG', 'nc|ENSG00000157554|P11308-1|ERG', 'ENSG00000157554|ENST00000288319|ERG', 'nc|ENSG00000157554|P11308-3|ERG'] 628 9100 AATAAERAAL True PC9_epitope_Rep6 943.5086939490699 943.50758993586 45.088 2 -1.0276039216304338 0.3121130569659689 1.0 ['ENST00000378295.8_1_1:3569180-3598955:+|nuORF'] 46633 10715 ITTRPNRIYMT True H1975_Epitope_Rep1 1364.7234548259198 1364.7223499358602 46.177 2 -1.0276188621040627 0.3121130569659689 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 58239 12529 LESVWYQN True NCI_RA007_Epitope_Rep2 1037.48181049489 1037.4807099358602 53.349 2 -1.0276199669828108 0.3121130569659689 1.0 ['ENST00000379958.2_1_7:92735396-92747190:-|nuORF'] 36356 7494 GVHLEMMSPG True PC9_epitope_Rep5 1056.47323704048 1056.47212993586 33.775 2 -1.0276596815609194 0.3121130569659689 1.0 ['ENSG00000148468|ENST00000378116|FAM171A1'] 139620 7831 YTRQERYRARP True NCI_RA007_Epitope_Rep5 1494.7803925384198 1494.77875490379 36.821 3 -1.0276672267838707 0.3121221762647152 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 57741 5909 LENNPEMK True H1975_Epitope_Rep3 973.45388149489 973.45278993586 27.739 2 -1.0277103163118855 0.3121312953216762 1.0 ['nc|ENSG00000196460|Q6ZV50|RFX8', 'ENSG00000196460|ENST00000428343|RFX8'] 92691 18924 RRHHRCRRQRP True NCI_RA007_Epitope_Rep2 1556.8555806810398 1556.85448993586 78.443 2 -1.0277415068459637 0.3121404141368614 1.0 ['ENSG00000163202|ENST00000368787|LCE3D'] 126525 11234 VPNRVLAP True PC9_epitope_Rep1 864.5181364339599 864.51702993586 48.091 2 -1.0278193246635914 0.3122158149400146 1.0 ['ENSG00000189252|ENST00000370503|SPANXN3'] 17934 15020 EIELKWEK True PC9_epitope_Rep1 1073.57571087973 1073.57460993586 62.595 2 -1.0279808814432765 0.31227795747388515 1.0 ['ENSG00000198746|ENST00000361720|GPATCH3'] 78479 8771 PDDPDFPGSPV True H1975_Epitope_Rep2 1141.49276910141 1141.49166993586 38.701 2 -1.0280152853644333 0.3123094461677139 1.0 ['ENSG00000177602|ENST00000325418|HASPIN', 'nc|ENSG00000177602|Q8TF76-2|HASPIN'] 114575 7115 TSKSDLRSNDF True NCI_RA007_Epitope_Rep5 1268.59969378144 1268.5985899358602 34.047 2 -1.0280164194594548 0.3123094461677139 1.0 ['ENSG00000109738|ENST00000264428|GLRB'] 9235 19444 AVQINELDK True PC9_epitope_Rep3 1028.5502244078798 1028.54912993586 80.017 2 -1.028117382979932 0.31235832924614587 1.0 ['ENSG00000198087|ENST00000359314|CD2AP', 'ENST00000463175.1_1_6:47544277-47547315:+|nuORF'] 36172 5216 GVFHVVTGL True PC9_epitope_Rep2 927.5178020807899 927.51670993586 25.453 2 -1.028142007200409 0.31236744432661717 1.0 ['ENSG00000010327|ENST00000321725|STAB1', 'STAB1|p.C740Mfs*9|1|0.15|ENSG00000010327|chr3:52508341-52508342|-/A|frameshift_variant', 'nc|ENSG00000010327|Q9NY15-2|STAB1', 'ENST00000481607.1_1_3:52529402-52542549:+|nuORF'] 68505 8938 LTVMVRER True NCI_RA007_Epitope_Rep5 1002.5644350033799 1002.56332993586 41.041 2 -1.028157186975656 0.31237655916544055 1.0 ['nc|ENSG00000167578|P61018-2|RAB4B', 'ENST00000597476.5_1_19:41285769-41292865:+|nuORF'] 131572 6171 VVVRLLIRR True PC9_epitope_Rep3 1122.7713314248597 1122.77022993586 28.78 2 -1.0281976133844033 0.3123856737626256 1.0 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.W3587Cfs*14|1|0.26|ENSG00000198626|chr1:237727121-237727121|G/-|frameshift_variant', 'RYR2|p.P2526Hfs*3|1|0.2|ENSG00000198626|chr1:237649940-237649940|C/-|frameshift_variant'] 29066 21413 FTPLHMAV True PC9_epitope_Rep2 914.46840936022 914.46730993586 87.836 2 -1.0282290960005842 0.312408043158411 1.0 ['ENST00000431297.1_1_21:15134673-15136650:+|nuORF', 'ENSG00000141965|ENST00000269856|FEM1A'] 131413 1220 VVTKEKLLLE True PC9_epitope_Rep5 1170.72237511342 1170.72073490379 6.7742 3 -1.0282411812037078 0.31241301610444694 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 71206 6315 MFLYFQTI True PC9_epitope_Rep1 1061.52558988317 1061.5244899358602 29.104 2 -1.028243913697243 0.31241301610444694 1.0 ['nc|ENSG00000077044|Q16760-2|DGKD'] 82836 20669 PVSVMEKSK True PC9_epitope_Rep4 1003.5372171960299 1003.5361099358599 87.661 2 -1.0283497357298539 0.31247100613675827 1.0 ['SLCO1C1|p.E488Nfs*50|1|0.48|ENSG00000139155|chr12:20737184-20737184|G/-|frameshift_variant', 'nc|ENSG00000139155|Q9NYB5-4|SLCO1C1', 'nc|ENSG00000139155|Q9NYB5-2|SLCO1C1', 'ENSG00000139155|ENST00000266509|SLCO1C1', 'nc|ENSG00000139155|Q9NYB5-3|SLCO1C1'] 12200 8995 DINKYMVV True NCI_RA007_Epitope_Rep4 980.50010341132 980.49900993586 41.433 2 -1.0283503946054036 0.31247100613675827 1.0 ['ENST00000392771.1_2_2:160803104-160803332:-|nuORF'] 34014 23660 GNKLFRSFRKM True PC9_epitope_Rep1 1382.76050904098 1382.75887490379 95.797 3 -1.0283762411894226 0.3124759771501279 1.0 ['RAG1|p.R973S|1|0.25|ENSG00000166349|chr11:36576221-36576221|C/A|missense_variant'] 120582 12267 VGAGAGGGSW True NCI_RA007_Epitope_Rep2 817.3718661230901 817.3713149679301 52.317 1 -1.0284076507172528 0.3124759771501279 1.0 ['ENST00000537025.6_1_17:66032291-66032333:+|nuORF'] 22529 9884 ETLEGLSDDAF True H1975_Epitope_Rep1 1195.52446315251 1195.52336993586 42.952 2 -1.0284514961086988 0.3124983432736912 1.0 ['nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'CHD9|p.W1426Mfs*3|1|0.15|ENSG00000177200|chr16:53263047-53263048|-/A|frameshift_variant'] 122898 22737 VGVRRRGNVRT True PC9_epitope_Rep2 1268.7537838677597 1268.7526899358602 92.954 2 -1.0284648779603824 0.3124991716697812 1.0 ['ENSG00000101265|ENST00000379400|RASSF2', 'nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 139908 7734 YVESSSHL True NCI_RA007_Epitope_Rep2 920.4239612655999 920.42286993586 34.71 2 -1.028474685223917 0.3124991716697812 1.0 ['ENSG00000188897|ENST00000696174|unknown'] 127695 20550 VRGRARAA True PC9_epitope_Rep6 855.5151167421899 855.51400993586 91.773 2 -1.028475778073977 0.3124991716697812 1.0 ['ENST00000591735.2_1_19:1491211-1495711:+|nuORF'] 114755 7211 TSVQGQRQPAP True NCI_RA007_Epitope_Rep4 1167.5996342117899 1167.5985299358601 34.371 2 -1.028503225975233 0.3125215363002624 1.0 ['ENST00000437508.6_2_4:154074414-154191598:+|nuORF'] 8679 5520 AVCFLYWDQ True H1975_Epitope_Rep2 1143.5059170677498 1143.50480993586 26.245 2 -1.0285294133096428 0.3125306474057385 1.0 ['ENST00000355653.7_1_17:41166726-41167353:-|nuORF'] 128075 19765 VRRLPGGG True PC9_epitope_Rep6 810.4824196315798 810.48132993586 88.685 2 -1.0285866540147195 0.3125397582697201 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 47342 15747 IYHGVPVV True PC9_epitope_Rep6 882.49633836022 882.49524993586 72.799 2 -1.0287268199031974 0.3126018792159773 1.0 ['ENSG00000174607|ENST00000310836|UGT8'] 117379 9999 VACFRMAP True PC9_epitope_Rep1 893.4251646492498 893.42406993586 43.327 2 -1.0287817622470405 0.31261098889448435 1.0 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant'] 16587 4458 EERLREQEDRL True NCI_RA007_Epitope_Rep5 1471.7379185897496 1471.73626490379 23.792 3 -1.0288286807811147 0.3126209217884498 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4'] 42717 7457 IEYPLFPSP True H1975_Epitope_Rep1 1061.54334812229 1061.5422499358601 33.68 2 -1.028860691811319 0.3126209217884498 1.0 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|306|3|anti-sense', 'chr3:195086022-195087933|373|11.99|0.24|5.62|-|0|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|50', 'chr1:245814415-245816795|376|16.24|0.01|10.82|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|18', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|233|1|anti-sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|182|1|anti-sense', 'L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|183|1|anti-sense', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|223|3|anti-sense', 'L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|181|1|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|234|2|anti-sense', 'chr8:91197524-91200613|289|13.1|0.22|5.87|+|1|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|52', 'chr6:109250991-109254448|382|11.17|0.13|6.42|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|48', 'chr5:90822097-90965415|264|32.48|0.18|7.5|+|0|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|51', 'chr3:195070111-195088018|311|10.27|0.09|6.77|-|1|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195088018,195093677|XXYLT1,None|50', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|243|2|anti-sense', 'chr3:195070111-195087933|359|13.86|0.27|5.66|-|0|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|50', 'chr3:121938530-121939349|399|11.42|0.04|8.21|+|0|TE_info:L1PA3,L1PA3_dup2051,L1,LINE,donor,-,121932761,121938530|None,SLC15A2|52', 'chr3:121938445-121939349|375|11.28|0.04|8.23|+|1|TE_info:L1PA3,L1PA3_dup2051,L1,LINE,donor,-,121932761,121938445|None,SLC15A2|52', 'chr3:118905718-119045392|154|10.07|0.0|19.94|-|1|TE_info:L1PA3,L1PA3_dup2038,L1,LINE,donor,+,119045392,119051153|IGSF11,None|42', 'chr2:113477199-113482177|379|28.75|0.21|7.07|+|0|TE_info:L1PA3,L1PA3_dup1127,L1,LINE,donor,-,113471482,113477199|None,ZNG1B|47', 'chr15:53523322-53540662|439|28.56|0.17|7.41|-|0|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|48', 'chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|55', 'chr14:58012150-58032884|335|10.01|0.03|8.51|-|0|TE_info:L1PA2,L1PA2_dup4307,L1,LINE,donor,+,58032884,58038561|ARMH4,None|25', 'chr11:102374933-102377496|150|10.29|0.03|8.55|+|0|TE_info:L1PA2,L1PA2_dup3799,L1,LINE,donor,-,102369167,102374933|None,BIRC2|49', 'chr1:89418355-89420191|333|23.34|0.01|11.25|+|0|TE_info:L1PA2,L1PA2_dup101,L1,LINE,donor,-,89412580,89418355|None,GBP1P1|51', 'chr1:245764149-245816795|362|34.57|0.05|9.58|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|18'] 109054 21741 TFAPVSLLSI True H1975_Epitope_Rep3 1046.60119735158 1046.60010993586 90.881 2 -1.0288638799557777 0.3126209217884498 1.0 ['ENST00000316292.13_1_6:74230456-74230621:-|nuORF'] 12120 17808 DIGVFLSKRI True PC9_epitope_Rep3 1146.67609362734 1146.6749899358601 73.696 2 -1.028876559992739 0.3126209217884498 1.0 ['ENST00000514380.5_1_4:26322378-26431729:+|nuORF', 'nc|ENSG00000168214|Q06330-3|RBPJ', 'nc|ENSG00000168214|Q06330-2|RBPJ', 'nc|ENSG00000168214|Q06330-5|RBPJ', 'nc|ENSG00000168214|Q06330-4|RBPJ', 'nc|ENSG00000168214|Q06330-6|RBPJ', 'ENSG00000168214|ENST00000355476|RBPJ', 'nc|ENSG00000168214|Q06330|RBPJ', 'ENST00000506903.1_1_4:26422193-26426401:+|nuORF', 'ENST00000511451.5_1_4:26364233-26422385:+|nuORF'] 45840 5571 ISQDVKLE True PC9_epitope_Rep6 930.5022115863 930.50110993586 29.47 2 -1.0289118406117677 0.31266978519274347 1.0 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2', 'ENST00000486282.6_1_1:110163774-110168851:+|nuORF'] 8489 5826 ATVDSEKFSTY True H1975_Epitope_Rep3 1246.5717476981 1246.57064993586 27.43 2 -1.0290423211523598 0.31278490406021414 1.0 ['ENSG00000067248|ENST00000251636|DHX29', 'ENST00000504778.5_1_5:54552318-54579000:-|nuORF'] 101563 8350 SPDAAGLL True H1975_Epitope_Rep2 742.3861192049001 742.3855749679301 37.071 1 -1.0290517000851171 0.3127940104684291 1.0 ['ENST00000563101.1_1_5:14664541-14664709:-|nuORF'] 105489 21260 SVCLSLRLV True PC9_epitope_Rep2 988.5739370579199 988.57282993586 87.237 2 -1.0291942017673175 0.31290497833490133 1.0 ['ENST00000443023.5_1_2:200322266-200322902:-|nuORF'] 122146 18014 VGRIHRHL True NCI_RA007_Epitope_Rep1 986.5886160356199 986.5880649679301 74.209 1 -1.029198779205022 0.31290497833490133 1.0 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'ENST00000511348.1_1_4:100870420-100870579:-|nuORF'] 2602 6223 AESLKENAFN True H1975_Epitope_Rep2 1121.53530261973 1121.5342099358602 28.9 2 -1.029245182023981 0.31290579038028354 1.0 ['nc|ENSG00000141068|Q8IVT5-4|KSR1', 'nc|ENSG00000141068|Q8IVT5-3|KSR1', 'nc|ENSG00000141068|Q8IVT5|KSR1'] 110207 14627 TIDVKELK True PC9_epitope_Rep3 944.5542471591599 944.55314993586 61.394 2 -1.0292699995380565 0.31290579038028354 1.0 ['ENSG00000147400|ENST00000370277|CETN2'] 30583 8454 GAKKKKKKKK True PC9_epitope_Rep6 1170.8288463009796 1170.82720490379 42.216 3 -1.0292819351332565 0.31290579038028354 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 66116 11610 LSNTVIPL True PC9_epitope_Rep4 855.5065686907499 855.50546993586 52.418 2 -1.0292982600280391 0.3129239983040068 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2'] 48504 8996 KEFLHFLTDQF True H1975_Epitope_Rep1 1423.7136013348697 1423.71250993586 39.509 2 -1.0293137611084113 0.3129239983040068 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'LY75|p.E1442Kfs*4|1|0.35|ENSG00000054219|chr2:159816862-159816862|C/-|frameshift_variant', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 135423 23740 YDSWKITG True NCI_RA007_Epitope_Rep5 968.46034677432 968.45924993586 98.661 2 -1.0293598329110574 0.3129554548586268 1.0 ['ENSG00000107672|ENST00000369023|NSMCE4A', 'nc|ENSG00000107672|Q9NXX6-2|NSMCE4A', 'ENST00000481320.5_1_10:123727168-123733579:-|nuORF'] 137741 19524 YNILRGIGKL True PC9_epitope_Rep1 1145.6920780446499 1145.69044490379 79.919 3 -1.0293716793601582 0.3129554548586268 1.0 ['ENST00000525494.1_1_11:70016194-70034107:+|nuORF', 'nc|ENSG00000131620|Q5XXA6-2|ANO1', 'nc|ENSG00000131620|Q5XXA6-4|ANO1', 'ENSG00000131620|ENST00000355303|ANO1', 'nc|ENSG00000131620|Q5XXA6-5|ANO1'] 20816 5853 EQNWRQHREAY True NCI_RA007_Epitope_Rep3 1515.69672248411 1515.69508490379 30.0 3 -1.0294938432673866 0.31299105664127197 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 8338 22798 ATLQKELSATS True H1975_Epitope_Rep3 1147.6084675599898 1147.60736993586 95.253 2 -1.029510757349487 0.3130001589909375 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'TTN|p.H3057Ifs*2|2|0.16|ENSG00000155657|chr2:178768151-178768151|A/-|frameshift_variant', 'TTN|p.P2078Qfs*61|1|0.14|ENSG00000155657|chr2:178775631-178775631|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 5346 12166 ALSVQPCVHV True PC9_epitope_Rep4 1051.54845058607 1051.5473499358602 54.613 2 -1.0295285903194642 0.3130225101686607 1.0 ['ENST00000257963.8_1_12:52388223-52388508:+|nuORF'] 68264 7163 LTRGPGAF True PC9_epitope_Rep2 817.4446371405298 817.44354993586 32.945 2 -1.0295432161470783 0.31302331743508216 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 79283 18727 PGHMGPRC True H1975_Epitope_Rep1 853.36871240229 853.36760993586 78.091 2 -1.0295512541481036 0.31302331743508216 1.0 ['ITGB6-RBMS1|1|fusion', 'nc|ENSG00000115221|P18564-2|ITGB6', 'ENSG00000115221|ENST00000283249|ITGB6'] 136223 10899 YGNLTETRTL True PC9_epitope_Rep6 1166.59315184902 1166.59150490379 52.787 3 -1.029563412294869 0.31302331743508216 1.0 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000512955.1_1_3:134086526-134093224:-|nuORF'] 54830 4615 LAFQKDMMKPL True H1975_Epitope_Rep3 1320.6934005675998 1320.69175490379 22.875 3 -1.029602833040996 0.31304566712152726 1.0 ['nc|ENSG00000144331|Q569K4-3|ZNF385B', 'nc|ENSG00000144331|Q569K4-2|ZNF385B', 'nc|ENSG00000144331|Q569K4|ZNF385B', 'ENSG00000144331|ENST00000410066|ZNF385B'] 100993 9695 SLSYHRMWMVR True NCI_RA007_Epitope_Rep2 1464.7118445964 1464.7107499358601 42.331 2 -1.0296803310482974 0.3130903647178835 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'ENST00000535220.1_1_12:6933100-6934099:+|nuORF'] 19423 23637 ELPKRRRQRG True PC9_epitope_Rep1 1294.7694339318998 1294.76832993586 95.714 2 -1.0297028891494142 0.3130903647178835 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B'] 79237 6874 PGGGRWLPAG True PC9_epitope_Rep5 966.5035489989798 966.50244993586 31.411 2 -1.029737523164243 0.3131127126278417 1.0 ['ENST00000282096.8_1_11:14665308-14793517:+|nuORF'] 82038 22796 PSTVKDCPTL True PC9_epitope_Rep1 1059.52704643515 1059.52647496793 92.496 1 -1.0297999815347347 0.31317480294098166 1.0 ['nc|ENSG00000069020|O15021-2|MAST4', 'nc|ENSG00000069020|O15021-3|MAST4', 'nc|ENSG00000069020|O15021-6|MAST4', 'ENSG00000069020|ENST00000403625|MAST4'] 98702 13211 SIREQWWRWNR True NCI_RA007_Epitope_Rep2 1615.8120270198697 1615.81092993586 56.021 2 -1.029897087121187 0.3132103966298386 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 93238 19112 RRRRRRRWRW True NCI_RA007_Epitope_Rep4 1638.9780787722198 1638.97642490379 82.661 3 -1.0299267032056327 0.31321949474743993 1.0 ['SLC4A2|p.Q100Rfs*145|1|0.3|ENSG00000164889|chr7:151064603-151064603|C/-|frameshift_variant'] 47098 11271 IVVQVETP True PC9_epitope_Rep2 883.5014833103099 883.50038993586 48.68 2 -1.0300260231098888 0.3132418397626113 1.0 ['nc|ENSG00000132359|Q684P5-3|RAP1GAP2', 'nc|ENSG00000132359|Q684P5-2|RAP1GAP2', 'ENSG00000132359|ENST00000254695|RAP1GAP2', 'ENST00000574515.1_1_17:2894647-2911342:+|nuORF'] 42922 23130 IFWKLVKW True PC9_epitope_Rep2 1118.6640723916598 1118.66296993586 94.46 2 -1.0300469649996915 0.3132641841857754 1.0 ['ENST00000255305.10_3_13:21436952-21442818:-|nuORF'] 108017 3935 TDCLKDVDLIP True NCI_RA007_Epitope_Rep2 1230.61658971554 1230.61495490379 19.943 3 -1.0300632391925588 0.31327328122930187 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant', 'ENST00000430598.5_1_15:20613931-20667676:-|nuORF', 'nc|ENSG00000290376|Q9BVR0|HERC2P3', 'ENST00000428453.5_1_15:20588586-20667676:-|nuORF', 'ENST00000529624.5_3_15:28877823-28916776:+|nuORF', 'ENST00000424611.5_1_15:20644728-20658919:-|nuORF'] 64957 6131 LSCSDRHISE True NCI_RA007_Epitope_Rep2 1145.51352162933 1145.5124299358602 28.455 2 -1.030146366200986 0.3133047210300429 1.0 ['OR5B3|p.T252Lfs*32|1|0.28|ENSG00000172769|chr11:58402657-58402657|C/-|frameshift_variant', 'OR5B3|p.V201Cfs*89|1|0.4|ENSG00000172769|chr11:58402809-58402810|-/A|frameshift_variant', 'ENSG00000172769|ENST00000641865|OR5B3'] 119689 9680 VESYAECNIHT True H1975_Epitope_Rep1 1264.5394020239999 1264.53830993586 42.159 2 -1.0301474141038478 0.3133047210300429 1.0 ['ENST00000506130.5_1_5:72853376-72858450:-|nuORF'] 13706 4145 DQHNFSPRCKF True H1975_Epitope_Rep3 1377.62480341381 1377.62314490379 21.064 3 -1.0302609823472186 0.3133626513365301 1.0 ['ENST00000531466.1_1_6:128326139-128326361:-|nuORF'] 3835 6931 AGYPVYKYVPY True NCI_RA007_Epitope_Rep1 1318.65977485686 1318.6581149037902 30.964 3 -1.030271222768313 0.3133626513365301 1.0 ['ENST00000313755.9_1_22:18900690-18907344:-|nuORF', 'nc|ENSG00000100033|O43272-2|PRODH', 'nc|ENSG00000100033|O43272-1|PRODH', 'ENSG00000100033|ENST00000357068|PRODH'] 15322 9154 EAKKTMEEQWT True H1975_Epitope_Rep1 1379.6391160652697 1379.63800993586 40.117 2 -1.0303207807615118 0.31339823829392677 1.0 ['ENST00000607283.5_1_3:53053042-53126502:-|nuORF'] 84145 5633 QEQWEAFVSGP True H1975_Epitope_Rep3 1276.5724164044398 1276.5713099358602 26.704 2 -1.0303584211396475 0.3133990304378924 1.0 ['ENSG00000105063|ENST00000412770|PPP6R1'] 33820 7739 GLTTAKMPSVP True NCI_RA007_Epitope_Rep1 1100.58998104488 1100.5888899358602 34.096 2 -1.0303632216894358 0.3133990304378924 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'PTPRC|p.L654Wfs*16|1|0.17|ENSG00000081237|chr1:198731707-198731707|T/-|frameshift_variant', 'PTPRC|p.L652Ffs*18|1|0.26|ENSG00000081237|chr1:198731706-198731706|C/-|frameshift_variant', 'PTPRC|p.C311Lfs*5|1|0.18|ENSG00000081237|chr1:198708157-198708158|-/T|frameshift_variant'] 130375 22088 VTVFLVTG True PC9_epitope_Rep3 834.4851049701799 834.4845549679301 90.257 1 -1.0303666706701593 0.3133990304378924 1.0 ['ENSG00000153230|ENST00000283225|OR14K1'] 89969 1491 RGAGSKRKRR True NCI_RA007_Epitope_Rep2 1170.71700443622 1170.71536490379 8.1254 3 -1.0306578615154072 0.3135273314878343 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 68857 14147 LVEAKQEVP True PC9_epitope_Rep3 1011.5600608155898 1011.55896993586 59.5 2 -1.0306944576943782 0.3135364238410596 1.0 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 74710 25705 NLKVILLG True NCI_RA007_Epitope_Rep1 868.5745886809199 868.57348993586 106.39 2 -1.0307400276399157 0.3135720056687991 1.0 ['nc|ENSG00000177674|Q6RW13-2|AGTRAP', 'ENSG00000177674|ENST00000314340|AGTRAP', 'ENST00000494437.1_1_1:11796265-11805895:+|nuORF', 'ENST00000491346.5_1_1:11796265-11806023:+|nuORF', 'nc|ENSG00000177674|Q6RW13-3|AGTRAP', 'nc|ENSG00000177674|Q6RW13-5|AGTRAP'] 12216 19719 DIPLGWPLPP True PC9_epitope_Rep1 1103.60153170475 1103.6004299358601 80.675 2 -1.0307559537698179 0.3135810971894784 1.0 ['ENST00000476339.1_1_5:140896303-140896369:-|nuORF'] 102639 7941 SQDESPLR True NCI_RA007_Epitope_Rep1 930.4406739588999 930.43956993586 34.881 2 -1.0307867381911502 0.3136431664966955 1.0 ['GGT7|p.G82E|1|0.24|ENSG00000131067|chr20:34863473-34863473|C/T|missense_variant'] 33880 16844 GLWIWRYQ True PC9_epitope_Rep4 1120.58179931968 1120.58070993586 72.769 2 -1.030856600795878 0.3136439488252589 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 125093 26582 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 107.98 3 -1.0308658414440566 0.3136439488252589 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 62526 20172 LLSVGSILQ True PC9_epitope_Rep4 928.5593325395998 928.55878496793 85.728 1 -1.0308987781364016 0.3136439488252589 1.0 ['nc|ENSG00000162073|Q8N4S7-2|PAQR4', 'ENSG00000162073|ENST00000318782|PAQR4', 'nc|ENSG00000162073|Q8N4S7-3|PAQR4'] 41758 10699 IDPWIFLMR True PC9_epitope_Rep6 1189.63178628721 1189.6306899358601 51.966 2 -1.0310595495282342 0.3137018594056259 1.0 ['ENST00000426799.1_1_X:65041494-65041635:-|nuORF'] 65633 5265 LSGQHKPEAPD True NCI_RA007_Epitope_Rep2 1177.5727507576098 1177.57164993586 25.102 2 -1.031069567654169 0.3137018594056259 1.0 ['ZP4|p.V17L|1|0.27|ENSG00000116996|chr1:237890587-237890587|C/A|missense_variant'] 10125 11591 AYYRYVAI True NCI_RA007_Epitope_Rep3 1017.5283667644899 1017.52726993586 52.721 2 -1.0311108152593706 0.3137556117651733 1.0 ['OR8J3|p.D121Y|1|0.1|ENSG00000167822|chr11:56137358-56137358|C/A|missense_variant', 'OR5H14|p.D121Y|1|0.09|ENSG00000236032|chr3:98149746-98149746|G/T|missense_variant'] 22828 6814 EVEEFSEDDDE True H1975_Epitope_Rep3 1341.47321542529 1341.47210993586 31.163 2 -1.0311250677713495 0.3137556117651733 1.0 ['ENSG00000084463|ENST00000261167|WBP11'] 58678 16409 LFICILVP True H1975_Epitope_Rep2 916.54559705176 916.54448993586 68.338 2 -1.031135263735988 0.3137556117651733 1.0 ['ENST00000418390.6_1_1:24088355-24088499:+|nuORF'] 39026 11351 HKLFWYTRRPE True NCI_RA007_Epitope_Rep2 1531.8048163811097 1531.80370993586 48.744 2 -1.0311702304639825 0.31376469965038667 1.0 ['ENST00000367456.5_1_6:149700636-149718820:+|nuORF'] 66256 12450 LSQALQAGTV True PC9_epitope_Rep4 986.5396597241798 986.53856993586 55.697 2 -1.0311838210885425 0.31377378729490285 1.0 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000111275|P05091-2|ALDH2', 'ENSG00000111275|ENST00000261733|ALDH2', 'ENST00000548536.1_1_12:112213467-112247376:+|nuORF'] 28172 11616 FRNDWLTPAP True NCI_RA007_Epitope_Rep2 1215.60365696307 1215.60254993586 49.775 2 -1.031256955404406 0.31384908758640784 1.0 ['nc|ENSG00000123572|Q7Z2Y5-2|NRK', 'ENSG00000123572|ENST00000243300|NRK'] 66932 12283 LSYHVLQAI True PC9_epitope_Rep4 1042.58113061334 1042.58002993586 55.063 2 -1.0313259111427986 0.3138714162749123 1.0 ['ENST00000502926.1_2_5:140806427-140807822:+|nuORF'] 42170 21481 IEFMRLTV True PC9_epitope_Rep1 1007.5473879569099 1007.54628993586 87.469 2 -1.031382082468077 0.31388050214524077 1.0 ['ENSG00000149488|ENST00000358864|TMC2', 'nc|ENSG00000149488|Q8TDI7-3|TMC2'] 125347 5527 VLSLCMLHGK True NCI_RA007_Epitope_Rep2 1099.58820722307 1099.58710993586 26.114 2 -1.0314321565123634 0.3139160718778553 1.0 ['ENST00000502774.1_1_4:154579740-154580577:+|nuORF'] 56170 5144 LDNNLDSV True PC9_epitope_Rep6 888.41887588516 888.41776993586 27.509 2 -1.0314782295428633 0.3139383987923409 1.0 ['ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000162923|Q9H7D7-2|WDR26', 'nc|ENSG00000162923|Q9H7D7|WDR26', 'ENST00000486652.5_1_1:224601027-224612368:-|nuORF', 'ENST00000443112.6_1_1:224601027-224621705:-|nuORF'] 105875 24434 SVKSLNAIQ True H1975_Epitope_Rep1 958.54474510462 958.54364993586 101.29 2 -1.0315434744880392 0.31396072511553386 1.0 ['ENST00000239231.6_1_5:167984225-167984402:-|nuORF'] 74557 21217 NLCRHNLSV True PC9_epitope_Rep5 1054.53419750426 1054.53310993586 86.659 2 -1.0316448621257992 0.31399629237288135 1.0 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF', 'ENST00000295746.12_1_3:108298530-108300316:-|nuORF'] 56571 7910 LDVTRDSFP True H1975_Epitope_Rep3 1048.5189242796 1048.5178299358602 35.4 2 -1.0316804995215512 0.3140186173382238 1.0 ['CLASP1|p.K1191Nfs*10|2|0.38|ENSG00000074054|chr2:121377568-121377568|C/-|frameshift_variant', 'nc|ENSG00000074054|Q7Z460-2|CLASP1', 'nc|ENSG00000074054|Q7Z460-4|CLASP1', 'nc|ENSG00000074054|Q7Z460-5|CLASP1', 'nc|ENSG00000074054|Q7Z460-3|CLASP1', 'nc|ENSG00000074054|Q7Z460|CLASP1', 'ENSG00000074054|ENST00000696935|CLASP1'] 10985 8060 DDAWPSRVDAA True PC9_epitope_Rep5 1201.5363652488902 1201.53526993586 35.94 2 -1.0317206488109907 0.3140409417123487 1.0 ['ENSG00000142700|ENST00000404795|DMRTA2'] 83941 9511 QEKYLRESLEK True H1975_Epitope_Rep2 1421.7514433955696 1421.74978490379 41.553 3 -1.0317757908380079 0.31405002449584896 1.0 ['ENSG00000144395|ENST00000389175|CCDC150', 'ENST00000471546.5_1_2:197504460-197531652:+|nuORF'] 82037 18518 PSTVKDCPTL True NCI_RA007_Epitope_Rep5 1059.52704643515 1059.5259499358601 78.057 2 -1.031788506651018 0.31405494869248596 1.0 ['nc|ENSG00000069020|O15021-2|MAST4', 'nc|ENSG00000069020|O15021-3|MAST4', 'nc|ENSG00000069020|O15021-6|MAST4', 'ENSG00000069020|ENST00000403625|MAST4'] 817 9095 ADAVRFLG True NCI_RA007_Epitope_Rep5 847.4552018242299 847.45410993586 41.638 2 -1.0317941734320013 0.31405494869248596 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant', 'ENST00000426414.6_1_4:85730999-85781744:-|nuORF'] 41871 12229 IDTYLLHMEK True PC9_epitope_Rep1 1261.63765951329 1261.63656993586 51.898 2 -1.0318493802609618 0.3141302332971427 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6'] 68072 10369 LTNSRILVDVP True H1975_Epitope_Rep1 1225.70303665117 1225.70192993586 44.833 2 -1.0318988798533728 0.31417903531187524 1.0 ['nc|ENSG00000203995|Q6WRX3-2|ZYG11A', 'ENSG00000203995|ENST00000371528|ZYG11A'] 27476 8030 FNWKIWPRWRT True NCI_RA007_Epitope_Rep5 1588.8415362429996 1588.83988490379 37.578 3 -1.0319602182083898 0.3142410761571867 1.0 ['ENST00000540171.2_1_14:105147650-105150445:+|nuORF'] 84327 12591 QFPGNSVAP True PC9_epitope_Rep1 915.4450310633499 915.4444849679301 53.299 1 -1.0320443663985268 0.31427663546452356 1.0 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 44351 9716 IMMFIGGP True PC9_epitope_Rep3 864.4237676669198 864.42266993586 42.326 2 -1.032080227696337 0.3142857142857143 1.0 ['nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 28749 20369 FSYVRIFW True PC9_epitope_Rep5 1116.5756513100798 1116.5745499358602 83.384 2 -1.0320979239026198 0.3143080324634918 1.0 ['ENSG00000171501|ENST00000373688|OR1N2'] 99456 8512 SLELANHLFYL True NCI_RA007_Epitope_Rep4 1318.6921376143 1318.69104993586 39.536 2 -1.032149859172341 0.31431711062860773 1.0 ['ENSG00000134627|ENST00000299001|PIWIL4'] 97219 9078 SFLDFWYTYVY True H1975_Epitope_Rep2 1502.67581884382 1502.6747299358601 39.87 2 -1.0321774193934938 0.31436590629261385 1.0 ['OR9G4|p.S75Y|1|0.25|ENSG00000172457|chr11:56743543-56743543|G/T|missense_variant'] 125134 9067 VLPRGATAA True PC9_epitope_Rep1 854.4974009893799 854.49630993586 39.728 2 -1.0322547579649322 0.3143708214734891 1.0 ['ENSG00000179918|ENST00000478753|SEPHS2'] 32875 14534 GILKATTP True PC9_epitope_Rep6 799.48035394291 799.47980496793 67.799 1 -1.0322584998821123 0.3143708214734891 1.0 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2', 'N4BP2|p.P1251S|1|0.21|ENSG00000078177|chr4:40121862-40121862|C/T|missense_variant'] 71788 1801 MNMKKSHEVQA True NCI_RA007_Epitope_Rep1 1301.62202653249 1301.62039490379 9.5189 3 -1.0322897126397845 0.3144063757678458 1.0 ['ENST00000547357.5_1_12:82752311-82853681:+|nuORF', 'ENSG00000127720|ENST00000248306|METTL25'] 109496 10852 TGYVLSASAV True PC9_epitope_Rep1 966.5022115862998 966.50110993586 46.628 2 -1.032315423495225 0.31441128968201437 1.0 ['ENSG00000235863|ENST00000451237|B3GALT4'] 118301 11320 VDCVKKLL True NCI_RA007_Epitope_Rep4 916.5415743004799 916.54046993586 50.438 2 -1.0323233824113194 0.31441128968201437 1.0 ['nc|ENSG00000165192|Q8WXH4-3|ASB11', 'nc|ENSG00000165192|Q8WXH4-2|ASB11', 'ENSG00000165192|ENST00000480796|ASB11'] 65010 15773 LSDIFRVVP True PC9_epitope_Rep6 1044.59678067748 1044.59568993586 72.914 2 -1.032471974402933 0.3145221074927191 1.0 ['nc|ENSG00000151892|P56159-2|GFRA1', 'ENSG00000151892|ENST00000355422|GFRA1'] 71694 22913 MLYIIRRK True PC9_epitope_Rep5 1091.6637551218298 1091.66317496793 93.127 1 -1.0324820195052145 0.3145221074927191 1.0 ['ENST00000367210.2_2_1:203822645-203822732:+|nuORF'] 40331 23841 HRSAAILGAW True PC9_epitope_Rep4 1080.58286194884 1080.5817699358602 100.12 2 -1.0325624380166427 0.31455765743106395 1.0 ['nc|ENSG00000103502|O14735-2|CDIPT', 'ENST00000563893.5_1_16:29872371-29874522:-|nuORF'] 74600 16335 NLDPRRSRRQY True NCI_RA007_Epitope_Rep1 1459.77564151115 1459.77454993586 67.651 2 -1.0326047297092702 0.3145625670148128 1.0 ['ENST00000261973.11_1_14:73525348-73538344:+|nuORF', 'ENST00000527432.5_1_14:73525300-73544147:+|nuORF', 'ENST00000531500.5_2_14:73525300-73544147:+|nuORF'] 125065 25818 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 106.85 3 -1.0326072136181341 0.3145625670148128 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 120939 4025 VGEKEKIS True NCI_RA007_Epitope_Rep3 888.4916469025999 888.49054993586 22.289 2 -1.0327336690340503 0.3146113523244732 1.0 ['ENSG00000113407|ENST00000265112|TARS1', 'nc|ENSG00000113407|P26639-2|TARS1'] 56860 9908 LEDKARELV True PC9_epitope_Rep4 1071.59242357303 1071.5913299358601 45.761 2 -1.032770501402877 0.3146204249123039 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 128260 15918 VSAGEDDDDDE True NCI_RA007_Epitope_Rep4 1165.3894858013298 1165.38838993586 69.097 2 -1.0328658774395496 0.31466087785249114 1.0 ['nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1', 'nc|ENSG00000183023|P32418-2|SLC8A1', 'nc|ENSG00000183023|P32418-3|SLC8A1', 'nc|ENSG00000183023|P32418-4|SLC8A1'] 67583 11086 LTESRACDAP True PC9_epitope_Rep1 1061.4811588718899 1061.48006993586 47.53 2 -1.0328815111270755 0.31466087785249114 1.0 ['ENSG00000144229|ENST00000409968|THSD7B', 'THSD7B|p.S646*|1|0.34|ENSG00000144229|chr2:137232912-137232913|-/C|frameshift_variant'] 81373 8982 PPSSTSFHLP True NCI_RA007_Epitope_Rep4 1068.52400966004 1068.52290993586 41.384 2 -1.0328951700249145 0.31466087785249114 1.0 ['ENST00000514938.1_1_22:50943492-50943879:-|nuORF'] 18654 6650 ELATSRTAP True H1975_Epitope_Rep2 944.4927095317599 944.49160993586 30.487 2 -1.0329025396278562 0.3146616193035168 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 74355 12397 NISCKASQDI True PC9_epitope_Rep3 1077.5124590001699 1077.51136993586 52.714 2 -1.0329197667962313 0.3146616193035168 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 127423 23908 VQRLWQRPWLR True PC9_epitope_Rep5 1536.8789843808797 1536.8778899358601 96.942 2 -1.0329376615277546 0.3146616193035168 1.0 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 42930 14090 IFYINISIFF True H1975_Epitope_Rep1 1275.69034670915 1275.68869490379 59.364 3 -1.0329878252951556 0.314675596262276 1.0 ['ENST00000301067.11_1_12:49414036-49414432:-|nuORF'] 113028 10073 TPTTPPAVAP True H1975_Epitope_Rep2 950.5072969667399 950.5067449679301 43.738 1 -1.0330027522627718 0.314675596262276 1.0 ['ENSG00000185049|ENST00000382882|NELFA', 'ENST00000463820.5_1_4:1985048-1993691:-|nuORF', 'NELFA|p.Q429Hfs*10|1|0.15|ENSG00000185049|chr4:1983895-1983896|TC/-|frameshift_variant', 'nc|ENSG00000185049|Q9H3P2-7|NELFA', 'ENST00000467661.5_1_4:1985048-1988196:-|nuORF'] 125283 19565 VLRQFRFDP True PC9_epitope_Rep1 1176.64037682496 1176.63926993586 80.082 2 -1.0330339873926324 0.314675596262276 1.0 ['nc|ENSG00000237541|P01909|HLA-DQA1'] 46076 9094 ISYIGKDAFR True NCI_RA007_Epitope_Rep1 1168.6240580544797 1168.62296993586 39.375 2 -1.0331098732781907 0.3146979021904573 1.0 ['ENSG00000162621|ENST00000294635|LRRC53'] 108135 5778 TDPVHLYKNWI True H1975_Epitope_Rep1 1384.71393568804 1384.71282993586 27.295 2 -1.0331450399817006 0.314720207528191 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 20555 8549 EQDHDWPKHWK True H1975_Epitope_Rep1 1504.68476081808 1504.68366993586 37.809 2 -1.0331831332871737 0.3147425122755006 1.0 ['nc|ENSG00000075399|Q9Y2B5-2|VPS9D1', 'ENSG00000075399|ENST00000389386|VPS9D1'] 93209 21468 RRRRRPAWRKR True H1975_Epitope_Rep2 1592.9824954463195 1592.98084490379 88.827 3 -1.0331951092267833 0.31475158156647876 1.0 ['CCDC97|p.E232Sfs*48|1|0.27|ENSG00000142039|chr19:41319763-41319763|G/-|frameshift_variant'] 135938 4937 YEWWFRWRLDR True NCI_RA007_Epitope_Rep1 1711.8371791385496 1711.83497987172 23.286 4 -1.0332122808704707 0.3148003546897127 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 129839 12551 VTLGRRVF True H1975_Epitope_Rep1 946.5712346359799 946.57012993586 53.323 2 -1.0333410045585667 0.31487559555320277 1.0 ['ENST00000377044.8_2_9:74383426-74383705:-|nuORF'] 127688 16574 VRGGVGGGLIG True NCI_RA007_Epitope_Rep5 940.5454138109598 940.54430993586 70.511 2 -1.0333643678109135 0.31489789706329985 1.0 ['ENST00000566392.5_1_16:67336668-67360655:-|nuORF'] 118792 10750 VEECRTEL True NCI_RA007_Epitope_Rep3 977.4487961144499 977.44768993586 49.331 2 -1.0334571888190158 0.31499616229521216 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-6|SYNE1', 'nc|ENSG00000131018|Q8NF91-5|SYNE1', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 107733 3820 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 19.711 2 -1.0334585821627593 0.31499616229521216 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 104359 8521 SSFLRRLYEEE True NCI_RA007_Epitope_Rep5 1427.7044932031502 1427.70338993586 39.459 2 -1.0335121005655752 0.31499616229521216 1.0 ['ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386'] 63406 11167 LPGIHVSA True PC9_epitope_Rep3 792.4493881678 792.44828993586 47.955 2 -1.0335249300002032 0.31499616229521216 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 66965 12532 LSYVRVSV True PC9_epitope_Rep2 921.5283667644899 921.52726993586 53.511 2 -1.033539901566799 0.31499616229521216 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 123379 15262 VICPHFVRP True NCI_RA007_Epitope_Rep3 1066.57460576426 1066.57350993586 67.576 2 -1.0335874093645074 0.3150101231986661 1.0 ['nc|ENSG00000169258|Q7Z2K8-2|GPRIN1'] 43542 7318 IIDYIFYSKPQ True NCI_RA007_Epitope_Rep1 1385.72310338941 1385.7220099358601 32.458 2 -1.0335931535354614 0.3150101231986661 1.0 ['ENSG00000113300|ENST00000261951|CNOT6'] 17126 7174 EGTINVHDVET True NCI_RA007_Epitope_Rep1 1212.56224564356 1212.5611499358602 31.894 2 -1.0336003823186661 0.3150101231986661 1.0 ['ENST00000468978.2_1_1:155159604-155160306:-|nuORF', 'nc|ENSG00000185499|P15941-13|MUC1', 'nc|ENSG00000185499|P15941-15|MUC1', 'nc|ENSG00000185499|P15941-6|MUC1', 'nc|ENSG00000185499|P15941-7|MUC1', 'nc|ENSG00000185499|P15941-17|MUC1', 'nc|ENSG00000185499|P15941-11|MUC1', 'nc|ENSG00000185499|P15941-8|MUC1', 'ENSG00000185499|ENST00000620103|MUC1', 'nc|ENSG00000185499|P15941-4|MUC1', 'nc|ENSG00000185499|P15941-3|MUC1', 'nc|ENSG00000185499|P15941|MUC1', 'nc|ENSG00000185499|P15941-2|MUC1'] 98219 10000 SIEDLLEASMP True H1975_Epitope_Rep3 1203.56930516995 1203.56820993586 43.501 2 -1.033624723531005 0.31501918750827046 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 7809 7244 ATAAESLRPSF True H1975_Epitope_Rep3 1148.5825871653199 1148.5814899358602 32.836 2 -1.0337052901107189 0.3150547167564277 1.0 ['ENSG00000142959|ENST00000372207|BEST4'] 234 18533 AAGAPNLVLAA True PC9_epitope_Rep4 966.5498304850599 966.54872993586 79.362 2 -1.0337238919468246 0.3150728434758445 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 100551 8638 SLPVNQLYG True NCI_RA007_Epitope_Rep3 989.51819600361 989.51708993586 41.052 2 -1.033735773386875 0.3150728434758445 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 58335 6943 LETTYIQSYD True H1975_Epitope_Rep1 1231.56084866123 1231.55974993586 31.746 2 -1.033799421298109 0.31509513853970944 1.0 ['ENSG00000136770|ENST00000376980|DNAJC1'] 124733 21857 VLKKKKKKKK True NCI_RA007_Epitope_Rep4 1254.92274668582 1254.9211049037901 94.745 3 -1.0338538478650898 0.3151174330135627 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 78276 16363 PARRVSRSSF True H1975_Epitope_Rep3 1161.6366884268498 1161.63558993586 68.414 2 -1.0339375816987384 0.31517942203874244 1.0 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67', 'MKI67|p.R1632Hfs*8|1|0.22|ENSG00000148773|chr10:128106936-128106945|GTCTTGAGCC/-|frameshift_variant', 'MKI67|p.N838Kfs*25|1|0.09|ENSG00000148773|chr10:128109326-128109327|-/T|frameshift_variant'] 101546 4818 SPARQEQHGA True NCI_RA007_Epitope_Rep3 1079.5108192073899 1079.5097299358602 25.92 2 -1.0339452577078614 0.31518848326871934 1.0 ['ENST00000278071.6_1_10:106074748-106075132:-|nuORF'] 18149 13764 EINSDDEQES True PC9_epitope_Rep5 1164.44185572736 1164.4407499358601 57.965 2 -1.0339670540167656 0.31518920349298757 1.0 ['ENSG00000109805|ENST00000251496|NCAPG'] 133823 26360 WLWEFLQR True PC9_epitope_Rep5 1176.60801406752 1176.60637490379 107.26 3 -1.0339696315062568 0.31518920349298757 1.0 ['nc|ENSG00000176700|Q9GZW5-2|SCAND2P', 'ENST00000348993.9_1_15:85175130-85180634:+|nuORF'] 111749 13876 TLQILFFLVS True H1975_Epitope_Rep1 1179.69034670915 1179.68924993586 58.523 2 -1.0340037440324967 0.31518920349298757 1.0 ['ENSG00000170915|ENST00000442253|PAQR8'] 59042 22071 LGAWWPLG True PC9_epitope_Rep2 898.4701236123799 898.46902993586 90.369 2 -1.0340632684667448 0.31522472579087335 1.0 ['ENST00000553208.5_1_12:58087944-58109621:+|nuORF'] 82339 13199 PTSSFHVG True PC9_epitope_Rep5 830.3922672145001 830.39116993586 55.777 2 -1.034103617770236 0.315260247148792 1.0 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2'] 68160 16789 LTPSDPGEFCV True PC9_epitope_Rep5 1163.51687567427 1163.5157699358601 69.585 2 -1.0341467407822325 0.31526930659010627 1.0 ['nc|ENSG00000140506|Q9HAT1-3|LMAN1L', 'ENSG00000140506|ENST00000309664|LMAN1L'] 71796 5634 MNREDMSLP True H1975_Epitope_Rep2 1091.47396531647 1091.4728699358602 26.671 2 -1.0341706898487952 0.3152839698897988 1.0 ['ENST00000251047.5_1_18:57006041-57006074:-|nuORF'] 69889 5925 LYC[Carbamidomethyl]DVC[Carbamidomethyl]PKTC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 1442.6356288295895 1442.6345299358602 27.656 2 -1.0341933140746697 0.3152839698897988 1.0 ['ENST00000524031.1_1_6:109739377-109752485:-|nuORF', 'nc|ENSG00000185250|Q8IXY8-3|PPIL6', 'ENSG00000185250|ENST00000521072|PPIL6', 'nc|ENSG00000185250|Q8IXY8-2|PPIL6'] 101480 21094 SNRNKVRHTKK True NCI_RA007_Epitope_Rep4 1366.7905632992995 1366.78891490379 91.455 3 -1.0342116558809857 0.3152839698897988 1.0 ['ENSG00000196350|ENST00000601693|ZNF729'] 16390 12699 EELLHIKAL True PC9_epitope_Rep2 1064.62299542532 1064.62188993586 54.153 2 -1.034220040481412 0.3152839698897988 1.0 ['nc|ENSG00000091428|Q8WZA2-2|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-5|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-4|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-3|RAPGEF4', 'ENSG00000091428|ENST00000397081|RAPGEF4'] 77686 4853 PAAANVRK True PC9_epitope_Rep4 825.48208527841 825.48098993586 25.256 2 -1.0342533200762922 0.3152839698897988 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ATXN2|p.A578Qfs*70|1|0.18|ENSG00000204842|chr12:111516277-111516277|C/-|frameshift_variant', 'ENST00000549455.1_1_12:111963110-112036838:-|nuORF'] 95230 12877 SACLSSSK True H1975_Epitope_Rep3 781.36400386133 781.36290993586 54.756 2 -1.0342736739659768 0.3152839698897988 1.0 ['ENST00000461013.5_1_5:131713711-131714174:+|nuORF'] 111206 13870 TLFQQLAPLY True H1975_Epitope_Rep1 1192.6492101731596 1192.64810993586 58.5 2 -1.0343037562856605 0.3152888571390774 1.0 ['nc|ENSG00000105197|Q3ZCQ8-3|TIMM50', 'ENSG00000105197|ENST00000607714|TIMM50', 'nc|ENSG00000105197|Q3ZCQ8-2|TIMM50'] 114540 9556 TSHTLHLSHL True PC9_epitope_Rep5 1144.5989059358 1144.5978099358601 41.716 2 -1.0343118253185197 0.3152888571390774 1.0 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000158941|ENST00000308511|CCAR2', 'nc|ENSG00000158941|Q8N163-2|CCAR2'] 12199 4690 DINKNLWEKM True PC9_epitope_Rep1 1289.64380752289 1289.64217490379 22.912 3 -1.0343444439505487 0.3152937441297475 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 50510 3636 KKKKKKRHSRK True PC9_epitope_Rep2 1450.96846809162 1450.96681490379 19.26 3 -1.03434519092036 0.3152937441297475 1.0 ['ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF', 'ENST00000521713.1_1_7:6179681-6199085:+|nuORF'] 14519 18573 DTYYYRRRHRH True PC9_epitope_Rep5 1621.79743958489 1621.7957849037898 76.465 3 -1.0343766444880889 0.3152944600243399 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 7408 17895 ASAPEQPLVP True PC9_epitope_Rep1 1007.5287606873098 1007.52766993586 73.626 2 -1.0344041913224717 0.3152944600243399 1.0 ['SNX19|p.S286L|1|0.26|ENSG00000120451|chr11:130915083-130915083|G/A|missense_variant'] 62102 9123 LLNNFAQQI True PC9_epitope_Rep3 1059.57129420563 1059.57018993586 40.029 2 -1.0344528757108016 0.3152944600243399 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 58014 11145 LERECWQTLCP True PC9_epitope_Rep3 1376.6216921793198 1376.6205899358602 47.868 2 -1.0345257978352478 0.31530840355031153 1.0 ['ENST00000454520.6_1_12:50388252-50390839:-|nuORF'] 80710 19715 PLQLQGPASL True PC9_epitope_Rep1 1022.5760452328999 1022.57494993586 80.659 2 -1.0345300981241605 0.31530840355031153 1.0 ['ENST00000370520.3_1_20:61273322-61274596:-|nuORF'] 18886 14841 ELEKYQQYKDI True H1975_Epitope_Rep1 1455.7245599413898 1455.72346993586 62.315 2 -1.0345498522229597 0.31530840355031153 1.0 ['nc|ENSG00000134278|Q08AE8-3|SPIRE1', 'nc|ENSG00000134278|Q08AE8-5|SPIRE1', 'nc|ENSG00000134278|Q08AE8-2|SPIRE1', 'ENSG00000134278|ENST00000409402|SPIRE1', 'nc|ENSG00000134278|Q08AE8-4|SPIRE1', 'SPIRE1|p.G591Rfs*25|1|0.26|ENSG00000134278|chr18:12454351-12454352|-/T|frameshift_variant'] 12343 10842 DIVSGSKLAV True PC9_epitope_Rep2 987.56006081559 987.55896993586 47.022 2 -1.0345941982513565 0.31535297152154074 1.0 ['DCDC1|p.I1627Kfs*18|1|0.15|ENSG00000170959|chr11:30894261-30894261|A/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.M1392*|1|0.16|ENSG00000170959|chr11:30905096-30905096|C/-|frameshift_variant'] 6576 13011 APVVRARA True PC9_epitope_Rep5 838.5137197598599 838.51262993586 55.054 2 -1.0345963272717578 0.31535297152154074 1.0 ['nc|ENSG00000132879|Q9H4M3-2|FBXO44'] 32794 7136 GIEAEKVSK True H1975_Epitope_Rep3 959.5287606873098 959.52766993586 32.42 2 -1.034601192010737 0.3153578561697287 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000586052.5_1_17:76450753-76471822:-|nuORF'] 89970 242 RGAGSKRKRR True PC9_epitope_Rep3 1170.71700443622 1170.71536490379 1.3655 3 -1.0346038719156478 0.3153578561697287 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 61396 10317 LLENRTEKRKR True NCI_RA007_Epitope_Rep2 1441.8477438222496 1441.8466499358601 44.722 2 -1.0346791132851434 0.31538013861700437 1.0 ['nc|ENSG00000135913|Q86T82-2|USP37', 'ENSG00000135913|ENST00000258399|USP37', 'USP37|p.E875Nfs*2|1|0.27|ENSG00000135913|chr2:218459810-218459810|C/-|frameshift_variant', 'ENST00000478329.1_1_2:219394729-219411793:-|nuORF'] 20078 3972 ENGNGKEK True NCI_RA007_Epitope_Rep2 874.4144592110599 874.41336993586 20.086 2 -1.0347533713356065 0.3154156471132862 1.0 ['nc|ENSG00000113742|Q17RY0-2|CPEB4', 'ENSG00000113742|ENST00000265085|CPEB4'] 100347 6052 SLNALFDFWRY True H1975_Epitope_Rep2 1430.6982856239001 1430.69665490379 28.256 3 -1.0347744946955584 0.3154295841709872 1.0 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209', 'nc|ENSG00000146842|Q96SK2-4|TMEM209'] 63026 19837 LNIEFKDLR True PC9_epitope_Rep4 1146.6397081186199 1146.6386099358601 84.434 2 -1.0347915438429036 0.3154295841709872 1.0 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C', 'nc|ENSG00000137145|Q5VZ89-3|DENND4C', 'nc|ENSG00000137145|Q5VZ89-5|DENND4C'] 42310 12742 IEKRLISP True NCI_RA007_Epitope_Rep4 954.5862159937799 954.58510993586 56.07 2 -1.0348109795008704 0.3154295841709872 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 87590 6047 QTQPPCSIW True H1975_Epitope_Rep3 1058.48551597634 1058.4844099358602 28.273 2 -1.0348211011913235 0.3154386382573503 1.0 ['ENST00000491617.5_1_3:149459348-149459438:-|nuORF'] 107218 7074 SYPHLVSARP True NCI_RA007_Epitope_Rep4 1125.59309227937 1125.59198993586 33.833 2 -1.0348685486799045 0.31546162696890745 1.0 ['ENST00000498526.1_1_2:130897068-130897428:-|nuORF'] 139176 24778 YSSSRRTTRK True PC9_epitope_Rep2 1240.6636314506798 1240.66307496793 100.99 1 -1.0349114272051805 0.31546162696890745 1.0 ['ENST00000398689.2_1_10:76415522-76415648:+|nuORF'] 20549 19353 EQAQQIRLQAE True PC9_epitope_Rep5 1312.6735274280397 1312.67242993586 79.487 2 -1.0349183431595217 0.31546162696890745 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 66292 9492 LSQGIVCFVP True H1975_Epitope_Rep1 1061.55795264061 1061.55684993586 41.43 2 -1.034923565246836 0.31546162696890745 1.0 ['ENST00000523752.5_1_8:22878538-22878592:-|nuORF'] 137641 4726 YLWLKDCKIN True H1975_Epitope_Rep3 1294.6743793751798 1294.6727249037901 23.305 3 -1.034976115653802 0.3154971301610813 1.0 ['nc|ENSG00000120802|P42166|TMPO'] 93518 20784 RSMHAYQRE True NCI_RA007_Epitope_Rep5 1176.54582481712 1176.54418490379 86.921 3 -1.0350342017402852 0.315519407524962 1.0 ['ENSG00000139437|ENST00000405876|TCHP', 'ENST00000537218.1_1_12:110338138-110342619:+|nuORF'] 31395 7520 GEAVVSAPSAP True H1975_Epitope_Rep2 983.4923751785899 983.49126993586 33.876 2 -1.0350554406298542 0.31552428686670986 1.0 ['ENST00000603475.1_1_9:90584039-90584273:-|nuORF'] 131373 6735 VVSLESQK True NCI_RA007_Epitope_Rep3 888.4916469026001 888.49054993586 33.582 2 -1.0350587307632348 0.31552428686670986 1.0 ['ENSG00000151304|ENST00000339397|SRFBP1'] 59245 20085 LGGLYYLDP True PC9_epitope_Rep1 1009.5120479940099 1009.51094993586 82.085 2 -1.0351036599922423 0.3155291659503564 1.0 ['PRLR|p.D610Y|1|0.29|ENSG00000113494|chr5:35065130-35065130|C/A|missense_variant'] 133192 18888 WDYRHAPLHP True PC9_epitope_Rep1 1290.6257893899801 1290.62468993586 77.438 2 -1.0351108694272861 0.3155291659503564 1.0 ['chr6:52269226-52271383|101|11.51|0.38|4.94|-|2|TE_info:AluSp,AluSp_dup17300,Alu,SINE,donor,+,52271383,52271674|MCM3,None|2'] 139258 8069 YTDEAVVIK True H1975_Epitope_Rep2 1036.54407639828 1036.5429699358601 35.985 2 -1.0351577040120579 0.3155472686158607 1.0 ['ENST00000505222.5_1_6:82901346-82950269:-|nuORF', 'nc|ENSG00000005700|Q9P2D0-2|IBTK', 'ENST00000369751.2_1_6:82901346-82950269:-|nuORF', 'ENSG00000005700|ENST00000306270|IBTK'] 58950 8487 LFWYTHHVFIL True NCI_RA007_Epitope_Rep5 1474.77614202178 1474.7750499358601 39.329 2 -1.0351850093759707 0.3155472686158607 1.0 ['NOX3|p.V212L|1|0.46|ENSG00000074771|chr6:155439990-155439990|C/G|missense_variant'] 117985 10159 VASFADVGW True H1975_Epitope_Rep3 950.4497820906199 950.44868993586 44.119 2 -1.0352245381764713 0.31555214683363525 1.0 ['nc|ENSG00000066855|Q15390-2|MTFR1', 'ENSG00000066855|ENST00000262146|MTFR1', 'ENST00000424808.6_1_8:66582187-66620357:+|nuORF'] 99969 19061 SLINVWITL True PC9_epitope_Rep1 1057.61718176889 1057.6160899358601 78.108 2 -1.0352384239837327 0.31555214683363525 1.0 ['ENSG00000165186|ENST00000379361|PTCHD1', 'nc|ENSG00000165186|Q96NR3-2|PTCHD1'] 133639 23564 WKKKYEET True H1975_Epitope_Rep2 1110.5709598524597 1110.5698699358602 97.124 2 -1.0353016769311496 0.3155611975034381 1.0 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-5|TACC1', 'nc|ENSG00000147526|O75410-4|TACC1', 'nc|ENSG00000147526|O75410-6|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'nc|ENSG00000147526|O75410-10|TACC1', 'ENST00000522752.5_1_8:38614850-38697853:+|nuORF', 'MYH4|p.Q1462K|1|0.43|ENSG00000264424|chr17:10448765-10448765|G/T|missense_variant'] 89153 5429 REHFRVPQRWW True NCI_RA007_Epitope_Rep5 1595.8221977807498 1595.8205549037898 27.57 3 -1.0353235855835452 0.315596694214876 1.0 ['ENST00000545260.5_2_10:34398874-34399204:-|nuORF'] 73498 9493 NFAETVKV True H1975_Epitope_Rep2 906.4810822188999 906.47998993586 41.483 2 -1.035402883743935 0.31560574405627695 1.0 ['INVS|p.A531Ffs*4|1|0.1|ENSG00000119509|chr9:100272883-100272884|GC/-|frameshift_variant', 'nc|ENSG00000119509|Q9Y283-2|INVS', 'ENSG00000119509|ENST00000262457|INVS'] 71483 16781 MKKRSRNTL True NCI_RA007_Epitope_Rep5 1132.64989596284 1132.6487899358601 71.304 2 -1.0354651165876745 0.3156280164491518 1.0 ['ENSG00000140534|ENST00000268138|TICRR', 'nc|ENSG00000140534|Q7Z2Z1-2|TICRR'] 951 13202 ADYAQFQGRRR True H1975_Epitope_Rep3 1366.6854295244198 1366.6843299358602 56.035 2 -1.0355048637327833 0.3156370656370656 1.0 ['CCDC113|p.R78Q|2|0.08|ENSG00000103021|chr16:58254002-58254002|G/A|missense_variant'] 68074 9148 LTNTNRALAL True PC9_epitope_Rep4 1085.61930702721 1085.61820993586 42.779 2 -1.0355525352042854 0.3156461145856748 1.0 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF', 'ENST00000431339.1_1_X:73326627-73327404:+|nuORF'] 712 12922 AAVKNIKL True H1975_Epitope_Rep3 855.55418758951 855.55308993586 54.932 2 -1.035634066923985 0.3156948300938781 1.0 ['nc|ENSG00000047346|Q32MH5-2|ATOSA', 'ENSG00000047346|ENST00000619572|ATOSA', 'nc|ENSG00000047346|Q32MH5-3|ATOSA'] 99760 10568 SLGLFVSEDLR True H1975_Epitope_Rep2 1234.65575210558 1234.65464993586 45.671 2 -1.0356352413531213 0.3156955297290865 1.0 ['ENSG00000133962|ENST00000256343|CATSPERB'] 3396 4887 AGIVENEWK True NCI_RA007_Epitope_Rep4 1044.5240096600398 1044.52290993586 25.247 2 -1.035651592584039 0.3156955297290865 1.0 ['nc|ENSG00000156738|P11836-2|MS4A1', 'ENSG00000156738|ENST00000345732|MS4A1'] 28619 16289 FSRLALPTRAS True H1975_Epitope_Rep1 1217.68805529337 1217.6869499358602 68.01 2 -1.0356740253310677 0.3156955297290865 1.0 ['ENST00000371975.8_1_1:46713425-46713950:+|nuORF'] 54679 12804 LAEAERLGP True PC9_epitope_Rep3 954.5134449763398 954.51234993586 54.273 2 -1.035686998411885 0.31571779887352247 1.0 ['ENSG00000187650|ENST00000339485|VMAC'] 134364 22090 WSGPPLLPGRL True PC9_epitope_Rep4 1191.67642798051 1191.67477490379 93.185 3 -1.035760046136812 0.31574006742910027 1.0 ['ENSG00000205116|ENST00000378821|TMEM88B'] 64768 966 LRRYKKCGCK True NCI_RA007_Epitope_Rep1 1253.68490157257 1253.6832449037902 5.1071 3 -1.0358046481032024 0.31576233539584325 1.0 ['ZNF492|p.E77K|1|0.23|ENSG00000229676|chr19:22663898-22663898|G/A|missense_variant'] 58333 5747 LETTGTSLP True PC9_epitope_Rep2 917.47057710485 917.46948993586 27.497 2 -1.035874849047637 0.3158068695629181 1.0 ['ENSG00000136014|ENST00000258499|USP44'] 76833 8256 NVGHRELRA True NCI_RA007_Epitope_Rep2 1050.56827451386 1050.5671699358602 36.752 2 -1.0358831007256508 0.3158068695629181 1.0 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2'] 31169 16475 GDEPGRPRSR True PC9_epitope_Rep2 1125.56391740941 1125.56282993586 68.612 2 -1.0359342017665096 0.31581173982020094 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 92779 19645 RRKRKWQRQKE True NCI_RA007_Epitope_Rep2 1597.9389588684896 1597.9378699358601 81.363 2 -1.0359511602953786 0.31581173982020094 1.0 ['ENST00000418635.6_1_6:35378793-35391776:+|nuORF', 'ENST00000360694.7_1_6:35378793-35389621:+|nuORF'] 78318 6436 PASPATAAP True PC9_epitope_Rep3 781.39701824177 781.39646496793 29.782 1 -1.0360164549551056 0.31583887471411765 1.0 ['ENSG00000183770|ENST00000648323|FOXL2'] 111929 20346 TLRWRKRWRWR True PC9_epitope_Rep3 1698.9807641108196 1698.97912490379 83.509 3 -1.0360218690742717 0.31583887471411765 1.0 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 107350 8228 SYRRTTFPV True PC9_epitope_Rep4 1125.59309227937 1125.59198993586 39.111 2 -1.0360312578368873 0.31583887471411765 1.0 ['nc|ENSG00000126838|P20742-2|PZP'] 5443 6022 ALYFYFHYLS True NCI_RA007_Epitope_Rep2 1322.63356010902 1322.6324699358602 28.033 2 -1.0360770428147217 0.3158611390196182 1.0 ['ENSG00000140832|ENST00000268485|MARVELD3'] 108184 7400 TDVLTGAAL True PC9_epitope_Rep5 859.4650978015899 859.46400993586 33.421 2 -1.0361426146661075 0.31587922692541576 1.0 ['ENSG00000085760|ENST00000263629|MTIF2'] 66779 9024 LSVEEFMSLP True PC9_epitope_Rep6 1150.55801221026 1150.5569099358602 44.749 2 -1.036145412689585 0.31587922692541576 1.0 ['ENSG00000221823|ENST00000234310|PPP3R1', 'ENSG00000188386|ENST00000374806|PPP3R2'] 10759 12424 CYGCCNLL True PC9_epitope_Rep5 887.33396668635 887.33286993586 52.788 2 -1.036222529749639 0.3159147091094161 1.0 ['ENST00000381801.5_1_13:25831448-25831925:-|nuORF'] 86474 8838 QQTYDMWLKK True H1975_Epitope_Rep3 1339.6594575870297 1339.65836993586 39.003 2 -1.0363077541222805 0.31594183740912096 1.0 ['ENSG00000100403|ENST00000352645|ZC3H7B'] 100588 13141 SLQFERGTL True PC9_epitope_Rep2 1049.5505587610498 1049.54946993586 55.819 2 -1.036317244883942 0.31594183740912096 1.0 ['nc|ENSG00000183146|Q9H606|PRORY'] 97154 11638 SFFSGITGFIS True H1975_Epitope_Rep2 1161.57062549929 1161.5695299358601 49.835 2 -1.0363351709209578 0.31594183740912096 1.0 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF'] 82479 12178 PVEAADFGERL True PC9_epitope_Rep3 1202.59315184902 1202.5920499358601 51.879 2 -1.03637852339159 0.3159689635572945 1.0 ['ENSG00000132825|ENST00000370996|PPP1R3D'] 131474 23619 VVTVIIII True NCI_RA007_Epitope_Rep3 868.5997407995999 868.59864993586 102.44 2 -1.0363834386813369 0.3159689635572945 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 41456 14921 IAWEPVQYFN True PC9_epitope_Rep1 1265.6080736371698 1265.60641490379 62.216 3 -1.0363866587575647 0.3159689635572945 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 65938 10552 LSLLHTSLSAY True NCI_RA007_Epitope_Rep1 1203.64993844915 1203.6488499358602 45.029 2 -1.0364144789512544 0.3159738285638755 1.0 ['ENSG00000162063|ENST00000397066|CCNF'] 2906 15419 AFAQSEYTVF True PC9_epitope_Rep2 1161.53423999057 1161.5331499358601 64.588 2 -1.0364534225171398 0.3159738285638755 1.0 ['ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000250120|Q9Y5I2-2|PCDHA10', 'nc|ENSG00000204961|Q9Y5H5-2|PCDHA9', 'ENSG00000250120|ENST00000307360|PCDHA10', 'nc|ENSG00000250120|Q9Y5I2-3|PCDHA10'] 44658 20060 IPLIERLQRN True NCI_RA007_Epitope_Rep1 1250.7459045226599 1250.74426490379 82.238 3 -1.0365123526085531 0.3159960875541927 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 82598 24606 PVKAAAAAAAA True PC9_epitope_Rep4 910.5236157372198 910.52250993586 103.14 2 -1.036603080967125 0.31607121614655614 1.0 ['ENST00000590548.5_1_19:11597897-11616622:-|nuORF', 'ENSG00000161914|ENST00000293771|ZNF653'] 84449 14130 QGKKPLTV True PC9_epitope_Rep4 869.5334521449299 869.53234993586 62.255 2 -1.036640091867251 0.3160934732612546 1.0 ['ENST00000601992.1_19:20588929-20591822:-|nuORF', 'ENST00000311237.4_19:20578692-20592633:-|nuORF'] 8840 16660 AVFPSIVGR True PC9_epitope_Rep5 944.5443511817999 944.54324993586 69.088 2 -1.036696265958687 0.3161421641840363 1.0 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 56628 6716 LDYRLSWHLWE True PC9_epitope_Rep1 1516.7462984454799 1516.7446649037902 30.636 3 -1.0367363744486626 0.3161512027491409 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98'] 13738 9876 DQLAKEAENEK True NCI_RA007_Epitope_Rep1 1273.6150094924099 1273.6139099358602 42.418 2 -1.0367491022767041 0.3161560624884354 1.0 ['nc|ENSG00000109083|Q8IY31-4|IFT20', 'ENST00000322326.12_1_17:26657393-26659262:-|nuORF', 'ENSG00000109083|ENST00000395418|IFT20', 'ENST00000582797.5_1_17:26657393-26662483:-|nuORF', 'nc|ENSG00000109083|Q8IY31-3|IFT20', 'nc|ENSG00000109083|Q8IY31-2|IFT20'] 56733 12284 LEAKTCLIFFS True NCI_RA007_Epitope_Rep2 1270.6631459851399 1270.66204993586 52.385 2 -1.0367716829416036 0.3161560624884354 1.0 ['ENST00000309134.9_1_11:8969705-8969762:-|nuORF'] 49057 18220 KFLNLQNQHEK True PC9_epitope_Rep6 1397.7415474182096 1397.7404499358602 82.726 2 -1.0368184062057106 0.31617413829562274 1.0 ['CCDC73|p.E339Q|2|0.39|ENSG00000186714|chr11:32642007-32642007|C/G|missense_variant'] 97175 13683 SFHKFHYL True PC9_epitope_Rep1 1077.53960015453 1077.53850993586 57.485 2 -1.0368339315850335 0.31617413829562274 1.0 ['ENST00000479107.1_1_6:33036772-33037066:-|nuORF', 'ENSG00000231389|ENST00000419277|HLA-DPA1'] 94459 6923 RYFWHVREEEF True NCI_RA007_Epitope_Rep1 1596.74736107464 1596.74626993586 30.933 2 -1.0368728993567635 0.3161789971717813 1.0 ['ENSG00000156564|ENST00000338305|LRFN2'] 71696 7823 MLYLESSV True PC9_epitope_Rep5 940.457569893 940.45646993586 35.035 2 -1.0368850259966549 0.3161789971717813 1.0 ['ENST00000355680.7_1_21:48084242-48084341:+|nuORF'] 110515 6422 TIQNPLAR True H1975_Epitope_Rep3 911.5188647099499 911.51776993586 29.68 2 -1.0369014940484016 0.31620125021475676 1.0 ['nc|ENSG00000145103|Q86SU0-5|ILDR1'] 64341 10050 LQNRRLFQSLH True NCI_RA007_Epitope_Rep3 1410.7844152896998 1410.7833099358602 46.626 2 -1.0369310682074102 0.3162102870434001 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 58944 10371 LFWKELGRRQH True NCI_RA007_Epitope_Rep3 1468.8051507342798 1468.8040499358601 47.854 2 -1.0369543835819315 0.31621932363319194 1.0 ['ENST00000412918.1_1_1:226844949-226862702:-|nuORF'] 112520 13218 TPAAHSTF True PC9_epitope_Rep1 830.3922672145001 830.39116993586 55.706 2 -1.0370652254136379 0.31625479053786176 1.0 ['ENST00000262971.2_1_19:4037866-4037950:+|nuORF'] 80311 20380 PLEVSVPAP True PC9_epitope_Rep6 907.5014833103098 907.5009349679301 91.091 1 -1.0370824547964683 0.316259646897135 1.0 ['ENST00000606285.1_1_6:710944-711145:-|nuORF'] 55765 7769 LDEECWFP True PC9_epitope_Rep1 1037.4164333570097 1037.4153299358602 34.705 2 -1.0371005339099038 0.316259646897135 1.0 ['ENSG00000100345|ENST00000216181|MYH9', 'nc|ENSG00000100345|P35579-2|MYH9', 'nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10', 'RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 121909 17851 VGPLELEIK True H1975_Epitope_Rep1 996.5855472874399 996.58444993586 74.335 2 -1.0371063722560638 0.31626868235698335 1.0 ['ENSG00000141519|ENST00000397545|CCDC40', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'ENST00000572253.5_1_17:78055494-78060128:+|nuORF'] 89975 2505 RGAGSKRKRR True PC9_epitope_Rep5 1170.71700443622 1170.71536490379 13.862 3 -1.0372107565527602 0.3163041467346777 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 119299 20615 VELLQQKLREK True NCI_RA007_Epitope_Rep1 1382.82454876618 1382.82344993586 84.411 2 -1.0372926416171793 0.3163396101750908 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'PCNT|p.G1782Afs*21|1|0.22|ENSG00000160299|chr21:46411414-46411414|G/-|frameshift_variant'] 134328 20029 WRWRPFLKKWT True NCI_RA007_Epitope_Rep3 1602.8935718158598 1602.8924699358602 87.283 2 -1.0373076731262554 0.3163444639718805 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 111744 12868 TLQEWNDPL True PC9_epitope_Rep5 1114.5294889632999 1114.52838993586 54.505 2 -1.0373077833779618 0.3163444639718805 1.0 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF'] 122926 12065 VGVTSNLF True PC9_epitope_Rep5 835.44396843419 835.44286993586 51.403 2 -1.0373958023196521 0.31638895862788885 1.0 ['ENST00000555787.1_1_14:90736495-90738748:+|nuORF'] 69672 7426 LVWDSEHSD True PC9_epitope_Rep5 1086.4618033263 1086.4607099358602 33.519 2 -1.0374034405896984 0.31638895862788885 1.0 ['ENSG00000145390|ENST00000692078|USP53'] 125384 21389 VLSVPAVSV True PC9_epitope_Rep5 869.52221875489 869.52167496793 87.334 1 -1.0374481845723789 0.31639799154334036 1.0 ['ENST00000564333.1_1_16:2487101-2487449:+|nuORF'] 82599 24777 PVKAAAAAAAA True PC9_epitope_Rep4 910.5236157372198 910.52250993586 103.81 2 -1.037457331689008 0.31640702422008166 1.0 ['ENST00000590548.5_1_19:11597897-11616622:-|nuORF', 'ENSG00000161914|ENST00000293771|ZNF653'] 55106 6543 LALQLSRHNKQ True PC9_epitope_Rep1 1306.74696715182 1306.7458699358601 29.972 2 -1.0374756236773073 0.31641605665812217 1.0 ['ENSG00000096433|ENST00000605930|ITPR3'] 78671 18857 PECCPGEM True H1975_Epitope_Rep2 864.2815967603199 864.28048993586 78.292 2 -1.0374831660677648 0.31642090798583583 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 47928 9189 IYYIFYMKK True H1975_Epitope_Rep1 1267.6675030895897 1267.6664099358602 40.252 2 -1.0374950627755806 0.31642090798583583 1.0 ['L1ME3G_dup9716|chrX:131361372-131362238:-|1.162874050545019|0.102023693220256|3.51|470.0|44|1|anti-sense'] 102069 2865 SPPRQQTPPL True NCI_RA007_Epitope_Rep1 1119.60365696307 1119.60254993586 14.968 2 -1.0375123738710819 0.31642993988240736 1.0 ['ENSG00000120645|ENST00000538872|IQSEC3'] 134329 20857 WRWRPFLKKWT True NCI_RA007_Epitope_Rep5 1602.8935718158598 1602.8924699358602 87.222 2 -1.0376154518173424 0.31645218402346537 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 41358 9108 IAMLETWWNK True NCI_RA007_Epitope_Rep2 1290.6430792468998 1290.64198993586 40.034 2 -1.037761016118793 0.3165801260454239 1.0 ['ENSG00000152208|ENST00000282020|GRID2', 'nc|ENSG00000152208|O43424-2|GRID2'] 113052 21852 TPVNKLLKI True PC9_epitope_Rep5 1024.6644663144798 1024.6633699358601 89.089 2 -1.0377968450663835 0.3165891554803932 1.0 ['ENSG00000126391|ENST00000317568|FRMD8', 'nc|ENSG00000227942|Q9BZ68|FRMD8P1', 'nc|ENSG00000126391|Q9BZ67-3|FRMD8', 'nc|ENSG00000126391|Q9BZ67-2|FRMD8'] 15744 19842 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 83.233 2 -1.0378724587922992 0.3166113966362351 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 90626 16125 RKKKLKKKKTL True PC9_epitope_Rep5 1397.9922232279696 1397.99056490379 67.015 3 -1.0379162943988423 0.3166162423537805 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 92714 24982 RRIIRILNLSK True PC9_epitope_Rep2 1380.9041364995599 1380.90250490379 101.76 3 -1.0379356212317605 0.3166162423537805 1.0 ['nc|ENSG00000164597|Q9UP83-3|COG5', 'ENSG00000164597|ENST00000297135|COG5', 'nc|ENSG00000164597|Q9UP83-1|COG5', 'nc|ENSG00000164597|Q9UP83|COG5'] 66181 16320 LSPIRNQLEIY True H1975_Epitope_Rep3 1344.74015043588 1344.73904993586 68.249 2 -1.037969269678542 0.3166210878152537 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-2|DMD'] 12297 7716 DISTHVQGQP True NCI_RA007_Epitope_Rep2 1080.5199869087598 1080.5188899358602 34.64 2 -1.0379846563861481 0.3166210878152537 1.0 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 8425 11339 ATRFRWWQPRH True H1975_Epitope_Rep1 1539.7959830329098 1539.79488993586 48.592 2 -1.0379992031559309 0.3166301159933416 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 79912 15704 PINRKRGNP True PC9_epitope_Rep2 1050.60466002258 1050.6035699358602 65.68 2 -1.0380178120195338 0.31663914393288856 1.0 ['L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|39|1|sense', 'L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|40|1|sense', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|142|3|sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|148|3|sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|187|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|156|3|sense', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|87|2|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|136|3|sense'] 127772 24457 VRKLSGLLIL True NCI_RA007_Epitope_Rep3 1110.7488646447798 1110.74776993586 105.84 2 -1.038104936237463 0.3166704096595638 1.0 ['ENSG00000180044|ENST00000326474|C3orf80'] 12361 16153 DIYKNDYYRKR True H1975_Epitope_Rep2 1532.77357582248 1532.77246993586 67.344 2 -1.0381429732952896 0.3166704096595638 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1'] 96906 9332 SETKASIS True PC9_epitope_Rep4 821.4130622287299 821.4125149679301 43.502 1 -1.038201060893143 0.3167258846372294 1.0 ['ENST00000506258.2_1_5:14610455-14614889:+|nuORF'] 78140 24338 PAPLDTIN True PC9_epitope_Rep1 839.43888305375 839.43833496793 98.445 1 -1.038243276517767 0.3167258846372294 1.0 ['ENSG00000171298|ENST00000302262|GAA'] 20066 9297 ENELLHPP True H1975_Epitope_Rep3 947.4712458111899 947.47014993586 40.755 2 -1.0382791936914109 0.3167258846372294 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000115155|Q9HC10-5|OTOF', 'nc|ENSG00000115155|Q9HC10-2|OTOF', 'ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.L1277Afs*4|1|0.37|ENSG00000214814|chr8:124069468-124069469|TC/-|frameshift_variant'] 46636 16245 ITTRPNRIYMT True PC9_epitope_Rep2 1364.7234548259198 1364.7223499358602 67.73 2 -1.038296410642023 0.3167258846372294 1.0 ['ENST00000445215.5_1_22:42995765-42998001:-|nuORF'] 56289 19847 LDQQEKMLL True PC9_epitope_Rep4 1116.58489566444 1116.58378993586 84.473 2 -1.0383595633221634 0.3167258846372294 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'ENST00000496841.5_1_2:128377972-128392002:+|nuORF', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B'] 5709 7603 APARLPAAPA True PC9_epitope_Rep3 933.5396001545298 933.53850993586 34.242 2 -1.0383686680596156 0.3167258846372294 1.0 ['ENST00000427004.5_1_6:33378256-33380059:+|nuORF'] 63582 24246 LPLLLHLH True PC9_epitope_Rep2 954.6014721351 954.60036993586 98.802 2 -1.0384007190148516 0.3167258846372294 1.0 ['ENST00000301732.9_1_16:2358503-2367727:-|nuORF'] 122696 12552 VGTTRYSI True PC9_epitope_Rep5 895.4763311916299 895.4752299358599 53.281 2 -1.0384199756907102 0.3167258846372294 1.0 ['PTPRF|p.A370G|1|0.5|ENSG00000142949|chr1:43591131-43591131|C/G|missense_variant'] 63815 16234 LPSRNSRRPTP True H1975_Epitope_Rep1 1279.71091599627 1279.71037496793 67.793 1 -1.0384278615435791 0.3167258846372294 1.0 ['KIAA1755|p.H733Tfs*30|1|0.28|ENSG00000149633|chr20:38223609-38223609|G/-|frameshift_variant'] 70256 8829 LYNFDLRGKDK True NCI_RA007_Epitope_Rep2 1367.7197493444698 1367.7186499358602 38.991 2 -1.0384378847168738 0.3167258846372294 1.0 ['ENSG00000156463|ENST00000359120|SH3RF2', 'SH3RF2|p.S564Qfs*64|1|0.55|ENSG00000156463|chr5:146059995-146059995|C/-|frameshift_variant', 'SH3RF2|p.A673Rfs*13|1|0.23|ENSG00000156463|chr5:146062527-146062527|G/-|frameshift_variant'] 15905 10666 EDRERRYRERK True H1975_Epitope_Rep3 1591.8291336359896 1591.82802993586 46.101 2 -1.0384389462301493 0.3167258846372294 1.0 ['ENSG00000126870|ENST00000407559|DYNC2I1', 'DYNC2I1|p.L508Ffs*8|2|0.37|ENSG00000126870|chr7:158911610-158911611|-/T|frameshift_variant', 'DYNC2I1|p.N527Ifs*23|1|0.41|ENSG00000126870|chr7:158911662-158911662|A/-|frameshift_variant'] 26873 21575 FLFDLAVIVC True PC9_epitope_Rep3 1138.6096538602999 1138.60854993586 88.283 2 -1.0384597411370229 0.3167258846372294 1.0 ['VAV3|p.R679Kfs*10|2|0.3|ENSG00000134215|chr1:107603143-107603144|-/T|frameshift_variant', 'nc|ENSG00000134215|Q9UKW4-2|VAV3', 'ENST00000343258.8_1_1:108115955-108328118:-|nuORF', 'ENSG00000134215|ENST00000370056|VAV3', 'nc|ENSG00000134215|Q9UKW4-4|VAV3'] 3321 14291 AGGRHFTHLL True PC9_epitope_Rep4 1107.5937609857099 1107.5926699358602 62.87 2 -1.0384694972387707 0.31673204168152463 1.0 ['ENST00000492337.5_1_3:181328318-181328423:+|nuORF'] 127737 26195 VRKERKRHKT True NCI_RA007_Epitope_Rep1 1336.81638412432 1336.8152899358602 108.41 2 -1.03852588428211 0.31673204168152463 1.0 ['ATP2A2-EP400|1|fusion', 'nc|ENSG00000183495|Q96L91-4|EP400', 'nc|ENSG00000183495|Q96L91-3|EP400', 'nc|ENSG00000183495|Q96L91-5|EP400', 'ENSG00000183495|ENST00000389561|EP400', 'nc|ENSG00000183495|Q96L91|EP400'] 107899 15280 TAVDTAVYYC True PC9_epitope_Rep4 1104.47976188956 1104.4786699358601 66.703 2 -1.0385513754931668 0.31673204168152463 1.0 ['nc|ENSG00000211952|A0A0C4DH34|IGHV4-28'] 16387 15073 EELKVSFSK True H1975_Epitope_Rep2 1065.57062549929 1065.5695299358601 63.128 2 -1.0385976806471025 0.31673204168152463 1.0 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'CLIP1|p.E1185Gfs*24|1|0.23|ENSG00000130779|chr12:122309804-122309805|-/T|frameshift_variant'] 81235 13959 PPNPPGKLLP True H1975_Epitope_Rep1 1028.6018660579198 1028.6007699358602 58.85 2 -1.0386135149198292 0.31673204168152463 1.0 ['ENST00000487555.5_1_9:123623373-123629236:-|nuORF', 'ENSG00000119403|ENST00000373896|PHF19'] 20218 8580 ENTPEPVSTS True NCI_RA007_Epitope_Rep5 1059.47203365683 1059.47147496793 39.683 1 -1.0386330727855089 0.31673204168152463 1.0 ['ENSG00000176105|ENST00000314574|YES1'] 129510 17146 VTFGTRELV True PC9_epitope_Rep2 1020.5603951687599 1020.55928993586 71.204 2 -1.0386461642409874 0.31673204168152463 1.0 ['ENST00000393389.7_1_11:82905209-82905431:+|nuORF'] 124067 21191 VKRLLKKQVVR True H1975_Epitope_Rep1 1365.92962297141 1365.92797490379 88.035 3 -1.0386544093621113 0.31673204168152463 1.0 ['ENSG00000175931|ENST00000319380|UBE2O', 'UBE2O|p.H1018Tfs*12|1|0.15|ENSG00000175931|chr17:76392008-76392008|G/-|frameshift_variant'] 84431 6733 QGHHAAGG True NCI_RA007_Epitope_Rep2 733.3255846370099 733.32503496793 30.804 1 -1.0387634724474781 0.3168467207269077 1.0 ['ENST00000525164.5_1_1:1248165-1249114:-|nuORF'] 64607 7013 LREGEAERKPV True PC9_epitope_Rep1 1282.69934825306 1282.69771490379 31.782 3 -1.038784787195861 0.316864764923402 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 55877 8629 LDFWRMIWEY True H1975_Epitope_Rep2 1457.68019303161 1457.67853490379 38.148 3 -1.038792559541417 0.316864764923402 1.0 ['nc|ENSG00000134242|Q9Y2R2-6|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-2|PTPN22', 'ENST00000484147.5_1_1:114375712-114414257:-|nuORF', 'nc|ENSG00000134242|Q9Y2R2-4|PTPN22', 'nc|ENSG00000134242|Q9Y2R2|PTPN22', 'ENSG00000134242|ENST00000359785|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-3|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-5|PTPN22'] 96351 7440 SEFSSSQGE True H1975_Epitope_Rep3 956.3723196155598 956.37122993586 33.596 2 -1.0388662501623294 0.3169266121683549 1.0 ['ENSG00000198780|ENST00000687041|FAM169A'] 99414 11565 SLEELSWSWV True NCI_RA007_Epitope_Rep1 1234.58700383942 1234.5859099358602 48.954 2 -1.0389052108973202 0.3169314475126448 1.0 ['ENST00000324953.9_1_6:109690109-109690166:-|nuORF'] 82033 13585 PSTSSAFPI True NCI_RA007_Epitope_Rep3 905.44944773745 905.4488949679301 60.735 1 -1.0389245420005742 0.3169314475126448 1.0 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 135661 7597 YEFYEPDD True H1975_Epitope_Rep2 1076.3974717342398 1076.39636993586 34.175 2 -1.0389447027965375 0.3169404680154244 1.0 ['nc|ENSG00000184675|Q5JTC6-2|AMER1', 'ENSG00000184675|ENST00000374869|AMER1'] 82766 7051 PVRDPPGRSGP True PC9_epitope_Rep6 1133.5941549085298 1133.5924949037899 36.135 3 -1.0391179116615883 0.31698910531528557 1.0 ['nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1'] 27301 13120 FLYTAAKKRK True NCI_RA007_Epitope_Rep1 1224.7342772097998 1224.73318993586 55.028 2 -1.0391288682256632 0.31700714408335207 1.0 ['IPO8|p.L397F|1|0.31|ENSG00000133704|chr12:30666207-30666207|G/A|missense_variant'] 46519 10856 ITQGSPLDK True H1975_Epitope_Rep1 957.51311062317 957.51200993586 46.717 2 -1.0391569575958821 0.31700714408335207 1.0 ['PHGDH-HMGCS2|1|fusion'] 71412 13971 MILIFYTLL True PC9_epitope_Rep5 1125.6507903962902 1125.64915490379 58.762 3 -1.0393884029779363 0.31709539404183396 1.0 ['ENST00000496055.5_1_1:76255003-76255042:+|nuORF', 'ENST00000489450.1_1_1:76254988-76255843:+|nuORF'] 139594 16206 YTQDQHLHNF True PC9_epitope_Rep2 1301.5788987672101 1301.5778099358602 67.585 2 -1.0395444552252844 0.3171572317078002 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 56041 5010 LDKQEWNPP True H1975_Epitope_Rep3 1125.54547338061 1125.54436993586 24.397 2 -1.039557976601053 0.31716206045080614 1.0 ['ENSG00000228075|ENST00000585477|BOD1L2'] 62099 9587 LLNLFHNQI True H1975_Epitope_Rep1 1110.61857875122 1110.61748993586 41.801 2 -1.039561215171668 0.31716206045080614 1.0 ['ENSG00000129988|ENST00000217407|LBP'] 135532 10357 YEEEGTPLRY True H1975_Epitope_Rep2 1255.5720820512697 1255.57098993586 44.846 2 -1.0395723980292801 0.31718428141340516 1.0 ['nc|ENSG00000163362|Q3KP66|INAVA', 'ENSG00000163362|ENST00000413687|INAVA', 'ENST00000487626.1_1_3:111904329-111904731:-|nuORF'] 44584 16865 IPFYWWLDMWR True H1975_Epitope_Rep1 1611.7696767423497 1611.7685699358601 70.281 2 -1.0397458121710101 0.31725512979639264 1.0 ['GPR142|p.A439Hfs*12|1|0.11|ENSG00000257008|chr17:74372525-74372525|G/-|frameshift_variant', 'ENSG00000257008|ENST00000582579|GPR142', 'nc|ENSG00000257008|Q7Z601|GPR142'] 136776 14592 YIRGYGGEEK True PC9_epitope_Rep6 1170.5669371011797 1170.5658499358601 68.026 2 -1.0397587892262337 0.31725512979639264 1.0 ['PTPN5|p.N357K|1|0.26|ENSG00000110786|chr11:18733565-18733565|G/T|missense_variant', 'nc|ENSG00000110786|P54829-2|PTPN5', 'nc|ENSG00000110786|P54829-3|PTPN5', 'ENSG00000110786|ENST00000358540|PTPN5'] 87316 5269 QSWMWATL True PC9_epitope_Rep2 1021.4691376362099 1021.46804993586 25.654 2 -1.039913185580924 0.3173301643889879 1.0 ['ENST00000532885.5_1_11:64128013-64135652:+|nuORF'] 109080 7206 TFEQLSMNLY True H1975_Epitope_Rep1 1244.57472490356 1244.57362993586 32.73 2 -1.0399622002249715 0.3173523819583817 1.0 ['DYRK2|p.L303Q|1|0.33|ENSG00000127334|chr12:67657815-67657815|T/A|missense_variant'] 101525 4550 SPAKNKTTA True PC9_epitope_Rep5 916.4977949122 916.49668993586 22.568 2 -1.0399769090569675 0.3173613953549784 1.0 ['ENST00000330843.8_1_8:37730107-37730260:-|nuORF'] 129624 10140 VTGYLVERK True PC9_epitope_Rep5 1063.6025943339098 1063.6014899358602 43.988 2 -1.0400222971737008 0.31741064945009967 1.0 ['ENSG00000086967|ENST00000357701|MYBPC2'] 44605 7075 IPHPGPPCAL True H1975_Epitope_Rep3 1000.5164221818 1000.51532993586 32.181 2 -1.0400420260027503 0.31741064945009967 1.0 ['ENST00000508158.5_1_4:3386893-3430067:+|nuORF'] 46662 9396 ITVIFLFFWLF True NCI_RA007_Epitope_Rep4 1444.8158815754398 1444.81478993586 42.997 2 -1.0400518784949198 0.31741064945009967 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 12490 9148 DKYRDQYNWFF True H1975_Epitope_Rep3 1580.7048275563195 1580.70372993586 40.177 2 -1.0400936316511986 0.31741064945009967 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 56459 10362 LDSSPRSFRY True NCI_RA007_Epitope_Rep2 1226.6043852390599 1226.6032899358602 44.897 2 -1.040132250131342 0.31744606691135696 1.0 ['ENSG00000128536|ENST00000317716|CDHR3'] 8675 10037 AVAYIAGF True NCI_RA007_Epitope_Rep4 810.4275900940598 810.42648993586 45.45 2 -1.0402440349603945 0.31749468597758207 1.0 ['ENSG00000157240|ENST00000287934|FZD1'] 105704 12192 SVHKFFNLLKE True PC9_epitope_Rep1 1360.7503211967598 1360.74922993586 51.754 2 -1.040286178471142 0.31749531328386976 1.0 ['RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'RB1|p.K228Nfs*36|1|0.48|ENSG00000139687|chr13:48360091-48360091|A/-|frameshift_variant', 'ENST00000525036.1_1_13:48877982-48934322:+|nuORF', 'ITM2B-RB1|4|fusion', 'ITM2B-RB1|1|fusion'] 65268 10511 LSEHLKNP True PC9_epitope_Rep2 936.50288029264 936.50178993586 45.753 2 -1.040301989711332 0.31749531328386976 1.0 ['ENSG00000168439|ENST00000305218|STIP1', 'nc|ENSG00000168439|P31948-3|STIP1', 'nc|ENSG00000168439|P31948-2|STIP1'] 80582 12343 PLNSWSAC True NCI_RA007_Epitope_Rep5 876.37998827864 876.37888993586 54.126 2 -1.0403263302079546 0.31749531328386976 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 90015 7966 RGEDAFCDP True H1975_Epitope_Rep2 1008.3970948947599 1008.39598993586 35.59 2 -1.040434503478802 0.3175529386914506 1.0 ['ENSG00000118193|ENST00000367350|KIF14'] 37889 14441 HEAQPRPP True H1975_Epitope_Rep2 930.4671634902598 930.46606993586 60.702 2 -1.040474351061142 0.3175529386914506 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF'] 26097 19000 FHEKSHGVAL True PC9_epitope_Rep5 1123.57744221523 1123.5763499358602 78.111 2 -1.0406045437673872 0.3175757735769353 1.0 ['DENND2B|p.R819Wfs*38|2|0.18|ENSG00000166444|chr11:8707200-8707201|CG/-|frameshift_variant'] 56130 14627 LDLYSFFSFLF True NCI_RA007_Epitope_Rep2 1397.69074063197 1397.6896499358602 61.562 2 -1.0406394852544851 0.3175757735769353 1.0 ['ENST00000477947.1_1_12:46287367-46287505:+|nuORF'] 44132 19520 ILPDYYSPA True PC9_epitope_Rep6 1037.5069626135698 1037.5058699358601 87.747 2 -1.0406473803385539 0.3175757735769353 1.0 ['nc|ENSG00000139835|Q5TC63-2|GRTP1', 'ENSG00000139835|ENST00000375431|GRTP1', 'nc|ENSG00000139835|Q5TC63-3|GRTP1'] 40904 24385 HVSLPLHA True NCI_RA007_Epitope_Rep2 872.48683630568 872.48572993586 102.41 2 -1.040654474557477 0.3175757735769353 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF'] 99737 12936 SLGILIFVLIE True H1975_Epitope_Rep1 1215.74786158527 1215.7467699358601 54.834 2 -1.0407603054246728 0.3176243845128246 1.0 ['ENSG00000081148|ENST00000193391|IMPG2', 'IMPG2|p.K61Afs*8|1|0.1|ENSG00000081148|chr3:101319728-101319738|GTTTCTTTTTG/-|frameshift_variant'] 72188 12932 MRRMRRRRRW True H1975_Epitope_Rep3 1558.8786246247398 1558.8775299358601 54.971 2 -1.0409151260730622 0.31775219790374104 1.0 ['ENST00000281708.8_1_4:153271275-153332654:-|nuORF'] 120410 9373 VFSSPRLDWP True H1975_Epitope_Rep1 1202.6084079903399 1202.60730993586 40.962 2 -1.040959798787762 0.31776601502171414 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1', 'nc|ENSG00000160410|Q8TBC3-2|SHKBP1'] 66635 10342 LSSRAEEPP True PC9_epitope_Rep1 984.4876241513199 984.48652993586 44.662 2 -1.0410017776339322 0.31776601502171414 1.0 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'GPHN-DCAF5|1|fusion'] 97257 13662 SFNIRKLI True PC9_epitope_Rep3 989.6022004110899 989.60110993586 57.615 2 -1.0410043601019796 0.31776601502171414 1.0 ['ENST00000590414.6_1_19:38230075-38230369:-|nuORF'] 63611 14574 LPLQDVYKI True NCI_RA007_Epitope_Rep4 1087.62774645259 1087.62664993586 63.436 2 -1.0410366968378064 0.3177750204598854 1.0 ['ENSG00000156508|ENST00000309268|EEF1A1', 'nc|ENSG00000196205|Q5VTE0|EEF1A1P5', 'ENSG00000101210|ENST00000217182|EEF1A2', 'MTAP-EEF1A2|1|fusion', 'ENST00000436459.2_1_9:135895553-135896258:+|nuORF', 'ENST00000514975.1_1_4:106406529-106406643:+|nuORF', 'ENST00000450915.1_1_7:88268512-88269193:+|nuORF'] 37262 8022 GVVIVAPK True NCI_RA007_Epitope_Rep5 781.5061747679299 781.50506993586 37.547 2 -1.0411162131690457 0.31783682466769625 1.0 ['ENST00000481145.1_1_1:89725323-89725548:-|nuORF'] 16230 9142 EEGENRRREWK True NCI_RA007_Epitope_Rep2 1487.72293723195 1487.72184993586 40.167 2 -1.0411733809580466 0.31784644219473884 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2', 'ENST00000505524.1_1_5:36108630-36114563:-|nuORF'] 81922 9010 PSNRQEDW True PC9_epitope_Rep5 1030.4468219684998 1030.44572993586 39.603 2 -1.0411804665812416 0.31784644219473884 1.0 ['nc|ENSG00000125447|Q9NZ52-2|GGA3', 'ENSG00000125447|ENST00000537686|GGA3'] 83617 8378 QDVIPDSQAA True NCI_RA007_Epitope_Rep2 1042.49310345458 1042.49200993586 37.229 2 -1.0411985333139335 0.31784644219473884 1.0 ['ENSG00000196074|ENST00000357552|SYCP2'] 139224 4906 YSYNYYFWLDF True PC9_epitope_Rep3 1579.6659824361097 1579.66432490379 23.968 3 -1.0412150291287252 0.31784644219473884 1.0 ['ENST00000483012.1_1_7:148516133-148534012:-|nuORF'] 116020 5408 TVRDKIYD True NCI_RA007_Epitope_Rep5 1008.5240096600398 1008.52290993586 27.49 2 -1.0413219705775096 0.31787887186390573 1.0 ['nc|ENSG00000164649|Q96GN5-5|CDCA7L', 'nc|ENSG00000164649|Q96GN5-2|CDCA7L', 'ENSG00000164649|ENST00000406877|CDCA7L', 'nc|ENSG00000164649|Q96GN5-4|CDCA7L', 'ENST00000488845.1_1_7:21941942-21945270:-|nuORF'] 56859 9587 LEDIRQRYEQQ True NCI_RA007_Epitope_Rep2 1476.7321049333202 1476.7310099358601 41.906 2 -1.0413310770413189 0.31787887186390573 1.0 ['ENSG00000154240|ENST00000535342|CEP112'] 137626 13157 YLVRGRQYWRY True H1975_Epitope_Rep3 1558.8157154179798 1558.81460993586 55.858 2 -1.0413606074500268 0.31787887186390573 1.0 ['ENSG00000008516|ENST00000336577|MMP25'] 20548 18351 EQAQQIRLQAE True PC9_epitope_Rep4 1312.6735274280397 1312.67242993586 78.653 2 -1.0413617288180752 0.31787887186390573 1.0 ['ENSG00000130203|ENST00000252486|APOE'] 2550 6749 AERFKDDP True H1975_Epitope_Rep2 976.4614094034798 976.46030993586 30.874 2 -1.0413718600553983 0.31787887186390573 1.0 ['CTNNA3|p.T109K|1|0.16|ENSG00000183230|chr10:67539636-67539636|G/T|missense_variant'] 18522 9070 EKQRHWLEPNK True NCI_RA007_Epitope_Rep1 1463.7633454919498 1463.7622499358602 39.285 2 -1.0413749480947412 0.31787887186390573 1.0 ['nc|ENSG00000172159|A2A2Y4-5|FRMD3', 'nc|ENSG00000172159|A2A2Y4-2|FRMD3', 'ENSG00000172159|ENST00000304195|FRMD3'] 41598 18121 IDFGNIPDTTP True PC9_epitope_Rep3 1188.5662683948399 1188.56461490379 74.901 3 -1.0413797509238314 0.31787887186390573 1.0 ['nc|ENSG00000104361|Q9H841-1|NIPAL2'] 46431 10786 ITLITELCER True NCI_RA007_Epitope_Rep1 1189.63765951329 1189.63656993586 45.95 2 -1.0413936853151784 0.31787887186390573 1.0 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000535852.6_1_14:24028960-24035624:-|nuORF', 'ENST00000553629.5_1_14:24035015-24036984:-|nuORF', 'ENST00000557619.5_1_14:24035015-24036327:-|nuORF', 'ENST00000556743.5_1_14:24034808-24036327:-|nuORF', 'ENST00000460049.6_1_14:24033375-24036327:-|nuORF'] 122512 8092 VGSSMKTE True NCI_RA007_Epitope_Rep5 837.39021860917 837.38912993586 37.815 2 -1.0414948980399092 0.3179196853926653 1.0 ['ENST00000441598.1_1_2:60597053-60605688:-|nuORF'] 16760 7682 EEYYGEQYSH True H1975_Epitope_Rep1 1303.4993110338298 1303.4982099358601 34.515 2 -1.0415344409805594 0.3179196853926653 1.0 ['nc|ENSG00000184402|O75177-2|SS18L1', 'ENSG00000184402|ENST00000331758|SS18L1', 'nc|ENSG00000184402|O75177-5|SS18L1', 'nc|ENSG00000184402|O75177-4|SS18L1', 'nc|ENSG00000184402|O75177-3|SS18L1'] 60702 19457 LIYCSRTVP True PC9_epitope_Rep2 1050.55320161334 1050.55210993586 80.223 2 -1.0415662921832227 0.3179196853926653 1.0 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2', 'ENST00000586441.1_1_19:45867568-45872241:-|nuORF'] 34575 5781 GQGADIWAYI True PC9_epitope_Rep4 1092.5240096600398 1092.52290993586 29.089 2 -1.0415720964879918 0.3179196853926653 1.0 ['ENST00000585968.5_1_19:36103696-36110661:+|nuORF', 'ENSG00000249115|ENST00000203166|HAUS5', 'ENST00000588570.5_1_19:36103696-36104695:+|nuORF', 'ENST00000428854.5_1_19:36103723-36104803:+|nuORF', 'nc|ENSG00000249115|O94927-2|HAUS5'] 85023 6686 QIGLTRESVTI True H1975_Epitope_Rep1 1215.68230120659 1215.6812099358601 30.767 2 -1.0415729755875913 0.3179196853926653 1.0 ['ENSG00000115825|ENST00000234179|PRKD3', 'nc|ENSG00000115825|O94806-2|PRKD3', 'ENST00000494667.5_1_2:37496701-37543667:-|nuORF', 'ENST00000464552.1_1_2:37520270-37543499:-|nuORF'] 49573 14818 KKKKEEKSKDK True NCI_RA007_Epitope_Rep2 1374.81946338574 1374.8178149037901 62.313 3 -1.0415915741234132 0.3179196853926653 1.0 ['ENSG00000198515|ENST00000514170|CNGA1'] 44027 4179 ILKTYEKELLY True H1975_Epitope_Rep1 1411.79626832967 1411.79461490379 21.022 3 -1.041629484365348 0.317950883490149 1.0 ['ADAM7|p.E57K|1|0.28|ENSG00000069206|chr8:24447198-24447198|G/A|missense_variant'] 20153 6124 ENMWEQEEK True NCI_RA007_Epitope_Rep2 1221.4972028588497 1221.4961099358602 28.427 2 -1.0416588767691095 0.317950883490149 1.0 ['ENSG00000174450|ENST00000567107|GOLGA6L2', 'nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2'] 123587 2617 VIKFLIIIA True PC9_epitope_Rep4 1028.6997891940398 1028.69868993586 15.057 2 -1.0417106219877081 0.31796049245873087 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 129711 18781 VTKARLTDK True NCI_RA007_Epitope_Rep2 1030.61349337078 1030.6123899358602 77.863 2 -1.0417161314411703 0.31796049245873087 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 121012 17368 VGFCLLVC True PC9_epitope_Rep3 852.4237676669198 852.42266993586 71.977 2 -1.0417490627733805 0.31796049245873087 1.0 ['ENST00000378487.2_1_12:92813988-92814823:-|nuORF'] 15919 3853 EDRRIHLEEIQ True NCI_RA007_Epitope_Rep2 1436.7371903137598 1436.73553490379 19.622 3 -1.0417799534532937 0.31796049245873087 1.0 ['nc|ENSG00000120647|Q9BR77-2|CCDC77', 'ENSG00000120647|ENST00000239830|CCDC77', 'ENST00000540344.5_1_12:498593-542579:+|nuORF'] 79129 20627 PGAHTTTI True PC9_epitope_Rep3 796.4079172786401 796.40682993586 84.613 2 -1.0418117249678869 0.3179826876385517 1.0 ['nc|ENSG00000120251|P42262-4|GRIA2', 'nc|ENSG00000120251|P42262-2|GRIA2', 'ENSG00000120251|ENST00000264426|GRIA2', 'nc|ENSG00000120251|P42262-3|GRIA2', 'ENST00000471736.5_1_4:158142110-158255356:+|nuORF', 'GRIA2|p.W547*|1|0.24|ENSG00000120251|chr4:157336543-157336543|G/-|frameshift_variant'] 96082 11343 SEDGRKKPV True H1975_Epitope_Rep1 1014.54580773378 1014.5447099358599 48.607 2 -1.0418270851680418 0.31799168700930264 1.0 ['ENSG00000182013|ENST00000313683|PNMA8A'] 132993 6514 VYVGICLA True NCI_RA007_Epitope_Rep3 836.4466112864799 836.44550993586 32.663 2 -1.0418757688394773 0.3180402712902119 1.0 ['ENSG00000162630|ENST00000367434|B3GALT2'] 117957 11686 VARRERAV True PC9_epitope_Rep4 955.5675462378698 955.56644993586 52.714 2 -1.0419443438264369 0.31804926966366265 1.0 ['nc|ENSG00000164403|Q2M3G4-2|SHROOM1', 'ENSG00000164403|ENST00000378679|SHROOM1'] 15252 7484 EAGLAPGELQ True H1975_Epitope_Rep2 983.49237517859 983.49182496793 33.735 1 -1.0419567502579803 0.31805407117127815 1.0 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF', 'ENST00000452600.1_1_2:130988892-130989183:+|nuORF'] 139761 19972 YVAFNGTKV True PC9_epitope_Rep1 997.5232813840498 997.52218993586 81.647 2 -1.0419642551092834 0.31805407117127815 1.0 ['nc|ENSG00000163531|O94856|NFASC', 'nc|ENSG00000163531|O94856-8|NFASC', 'nc|ENSG00000163531|O94856-5|NFASC', 'nc|ENSG00000163531|O94856-13|NFASC', 'nc|ENSG00000163531|O94856-7|NFASC', 'ENSG00000163531|ENST00000339876|NFASC', 'nc|ENSG00000163531|O94856-6|NFASC', 'nc|ENSG00000163531|O94856-11|NFASC', 'nc|ENSG00000163531|O94856-3|NFASC', 'nc|ENSG00000163531|O94856-10|NFASC', 'nc|ENSG00000163531|O94856-12|NFASC', 'nc|ENSG00000163531|O94856-4|NFASC', 'ENST00000512826.5_1_1:204926851-204957975:+|nuORF', 'ENST00000404977.6_1_1:204951067-204978869:+|nuORF', 'ENST00000495396.5_1_1:204956439-204985664:+|nuORF', 'ENST00000492085.1_1_1:204956601-204966704:+|nuORF'] 37523 4089 GYKPGAPP True NCI_RA007_Epitope_Rep4 785.40718900265 785.40608993586 22.006 2 -1.0420441620256933 0.3180810639645345 1.0 ['ATN1|p.S661A|1|0.29|ENSG00000111676|chr12:6937248-6937248|T/G|missense_variant'] 117746 16475 VALKAADI True PC9_epitope_Rep5 799.4803539429099 799.47924993586 68.369 2 -1.042051466094975 0.3180810639645345 1.0 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1', 'ENST00000510774.1_1_3:130699433-130714956:+|nuORF'] 46864 13192 IVGGLCFIPMK True NCI_RA007_Epitope_Rep2 1176.63990844276 1176.63880993586 55.947 2 -1.0420769769309595 0.3180810639645345 1.0 ['ENST00000300584.7_1_15:78322423-78337251:-|nuORF'] 55955 13117 LDHYINHLL True PC9_epitope_Rep2 1136.59784330664 1136.59674993586 55.729 2 -1.0421168456475425 0.31811644874856515 1.0 ['ENSG00000044446|ENST00000379942|PHKA2'] 112093 5138 TLTPDSKK True NCI_RA007_Epitope_Rep5 888.4916469026 888.49054993586 26.459 2 -1.0421581474190478 0.3181344415858566 1.0 ['ENSG00000181544|ENST00000650831|FANCB'] 72307 4735 MSFFVSFNCCY True H1975_Epitope_Rep2 1346.5133876003001 1346.51173490379 23.305 3 -1.0421595036705107 0.3181344415858566 1.0 ['chr3:153927317-153979854|138|13.17|0.05|7.92|-|0|TE_info:L1PB1,L1PB1_dup2586,L1,LINE,donor,+,153979854,153983404|LINC02006,None|20'] 19737 11577 ELSQMQKKYYK True NCI_RA007_Epitope_Rep1 1444.73843618372 1444.73732993586 49.002 2 -1.0422474861606963 0.31822259749854875 1.0 ['ENSG00000116254|ENST00000262450|CHD5'] 134709 6687 WWRRRWTRSQW True H1975_Epitope_Rep1 1702.8705449554998 1702.86944993586 30.77 2 -1.0422849788042896 0.3182411841532434 1.0 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 137009 13960 YKKSALQQR True PC9_epitope_Rep1 1120.63529144452 1120.6341899358601 58.533 2 -1.0422880584477519 0.3182411841532434 1.0 ['ENST00000470597.5_1_5:64558740-64769500:-|nuORF', 'nc|ENSG00000049192|Q9UKP5-3|ADAMTS6', 'nc|ENSG00000049192|Q9UKP5-2|ADAMTS6', 'ENSG00000049192|ENST00000381055|ADAMTS6', 'nc|ENSG00000049192|Q9UKP5-4|ADAMTS6'] 83337 6689 QAMRWDQASDR True NCI_RA007_Epitope_Rep5 1362.6098816256597 1362.6087899358602 32.399 2 -1.042300314960693 0.3182411841532434 1.0 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7', 'CUL7|p.A1385Qfs*24|1|0.16|ENSG00000044090|chr6:43040297-43040297|C/-|frameshift_variant'] 59256 3951 LGGPRGPK True NCI_RA007_Epitope_Rep4 780.4606215578399 780.45952993586 21.434 2 -1.0423537963264373 0.3182411841532434 1.0 ['ENSG00000118160|ENST00000236877|SLC8A2'] 11092 6819 DECLTSRP True NCI_RA007_Epitope_Rep1 919.40693130247 919.40582993586 30.531 2 -1.0423564036598363 0.3182411841532434 1.0 ['ENST00000500112.1_1_8:128231186-128231234:-|nuORF'] 39303 5538 HLQPSEPA True PC9_epitope_Rep3 877.4293809992099 877.42828993586 26.383 2 -1.0423654930845188 0.3182501780955648 1.0 ['ENST00000579315.5_1_17:16852257-16855884:-|nuORF'] 112076 18729 TLTLFLMTI True PC9_epitope_Rep2 1051.59875482343 1051.59764993586 77.42 2 -1.042452114810358 0.318334124848293 1.0 ['ENSG00000187554|ENST00000642603|TLR5'] 37498 4113 GYFRVWKVPKP True NCI_RA007_Epitope_Rep3 1375.7764763749497 1375.7748449037902 22.715 3 -1.042462898904264 0.318334124848293 1.0 ['ENSG00000187166|ENST00000335017|H1-7'] 93541 27427 RSPRGILG True PC9_epitope_Rep1 854.5086343794198 854.50752993586 112.17 2 -1.0425219099740637 0.3183653008996649 1.0 ['ENST00000298310.9_1_14:50319457-50319715:-|nuORF'] 11320 21392 DEVQWTER True PC9_epitope_Rep5 1061.47778774361 1061.4766899358601 87.346 2 -1.0425645661164886 0.3183653008996649 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A'] 94189 7188 RWLWWQPWWWK True H1975_Epitope_Rep1 1756.8779217517197 1756.87627490379 32.668 3 -1.0427050324826201 0.3184096665259603 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1'] 44839 11934 IPWRHATRH True NCI_RA007_Epitope_Rep3 1172.63154347676 1172.62990490379 54.07 3 -1.0427422780741633 0.3184096665259603 1.0 ['nc|ENSG00000128604|Q13568-5|IRF5', 'nc|ENSG00000128604|Q13568-4|IRF5', 'nc|ENSG00000128604|Q13568|IRF5', 'nc|ENSG00000128604|Q13568-3|IRF5', 'ENSG00000128604|ENST00000357234|IRF5', 'nc|ENSG00000128604|Q13568-6|IRF5', 'ENST00000461416.1_1_7:128582135-128587139:+|nuORF', 'ENST00000488569.5_1_7:128577991-128586617:+|nuORF'] 3776 6324 AGVALHSSV True NCI_RA007_Epitope_Rep4 839.4501164437901 839.44900993586 30.928 2 -1.042784208660276 0.3184318484612645 1.0 ['nc|ENSG821|P63135|ERVK-7_pol', 'nc|ENSG845|O71037|ERVK-19_env', 'nc|ENSG802|Q902F9|HERVK_113_env', 'nc|ENSG819|P61567|ERVK-7_env', 'nc|ENSG825|Q69384|ERVK-6_env', 'nc|ENSG815|Q902F8|ERVK-8_env', 'nc|ENSG811|Q9UKH3|ERVK-9_env', 'nc|ENSG836|P61566|ERVK-24_env', 'nc|ENSG833|P61570|ERVK-25_env', 'HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|121|2|sense', 'nc|ENSG849|O42043|ERVK-18_env'] 81203 17792 PPLMLIIF True NCI_RA007_Epitope_Rep1 942.5612471159 942.56014993586 73.345 2 -1.0428356085744206 0.3184408389394539 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 119274 15109 VELGQYGFAL True PC9_epitope_Rep3 1095.5600608155898 1095.5589699358602 63.255 2 -1.0431458843171588 0.3186476896492593 1.0 ['nc|ENSG00000139865|Q86TZ1|TTC6', 'nc|ENSG00000139865|Q86TZ1-2|TTC6', 'ENSG00000139865|ENST00000553443|TTC6'] 124669 25185 VLILILCLKV True PC9_epitope_Rep2 1125.75592417117 1125.75537496793 102.54 1 -1.043166774377301 0.31865667704321216 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 36206 20235 GVFVCYFYY True PC9_epitope_Rep2 1159.5048544385897 1159.5042749679299 83.251 1 -1.0431812946956733 0.31866566420007125 1.0 ['ENSG00000121073|ENST00000240333|SLC35B1', 'nc|ENSG00000121073|P78383-2|SLC35B1', 'ENST00000508607.1_1_17:47783564-47785273:-|nuORF', 'ENST00000509781.5_1_17:47783523-47785306:-|nuORF', 'ENST00000435059.6_1_17:47781399-47785273:-|nuORF'] 55400 9544 LASVMAGLCYA True NCI_RA007_Epitope_Rep2 1097.5249382601698 1097.5238499358602 41.738 2 -1.043212207245993 0.3187142216477168 1.0 ['ENSG00000003989|ENST00000494857|SLC7A2', 'nc|ENSG00000003989|P52569-2|SLC7A2', 'nc|ENSG00000003989|P52569-3|SLC7A2'] 11348 16015 DFDKQRYFRA True NCI_RA007_Epitope_Rep2 1344.65748344108 1344.65638993586 67.012 2 -1.0432352288195343 0.3187190039041891 1.0 ['nc|ENSG00000156414|Q8NDG6-2|TDRD9', 'ENSG00000156414|ENST00000409874|TDRD9'] 135113 19420 YAPDYSSRL True PC9_epitope_Rep1 1070.5032742154601 1070.5021699358601 79.511 2 -1.043239628599682 0.3187190039041891 1.0 ['nc|ENSG00000188343|A1XBS5-3|CIBAR1', 'ENSG00000188343|ENST00000518322|CIBAR1', 'nc|ENSG00000188343|A1XBS5-2|CIBAR1'] 99598 14876 SLFLLHLL True PC9_epitope_Rep5 954.5902387450601 954.58914993586 62.224 2 -1.043276868339556 0.3187501648685009 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|89|1|anti-sense'] 122698 12416 VGTTTGQG True PC9_epitope_Rep3 719.34498266891 719.34443496793 52.787 1 -1.043280747721189 0.3187501648685009 1.0 ['nc|ENSG00000115761|Q9BSC4-2|NOL10'] 133924 7559 WNRIFRWKCHD True NCI_RA007_Epitope_Rep2 1559.7568206428698 1559.75518490379 34.028 3 -1.0433104880598598 0.318750741878899 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.G158Sfs*29|1|0.37|ENSG00000081248|chr1:201092040-201092042|CCG/AA|frameshift_variant', 'CACNA1S|p.G577Afs*35|2|0.19|ENSG00000081248|chr1:201077017-201077017|C/-|frameshift_variant'] 64920 16772 LSCHCHSC True PC9_epitope_Rep2 888.3040635404002 888.30296993586 69.76 2 -1.043316949696136 0.318750741878899 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 5716 7554 APASRVSSAA True PC9_epitope_Rep1 915.47739382079 915.47628993586 33.874 2 -1.043329245653579 0.318750741878899 1.0 ['ENST00000531395.1_1_8:11659765-11659999:-|nuORF'] 23114 18397 EVLTDSLRRLW True NCI_RA007_Epitope_Rep1 1386.7619485096197 1386.76030490379 75.696 3 -1.0434096059012348 0.3187992930811638 1.0 ['ENST00000298569.8_1_5:175773868-175773925:-|nuORF'] 63142 11303 LNQTIDIC[Carbamidomethyl]KH True NCI_RA007_Epitope_Rep1 1240.6234067109099 1240.6223099358601 47.944 2 -1.0434407456352448 0.31880407258915383 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.C662Sfs*16|1|0.55|ENSG00000138829|chr5:128374738-128374739|-/G|frameshift_variant'] 78085 19879 PALVGKDK True PC9_epitope_Rep1 826.4912529797799 826.49014993586 81.284 2 -1.0434479383830308 0.31880407258915383 1.0 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 20430 22352 EPPSVPLLLPP True PC9_epitope_Rep4 1157.66961126457 1157.66797490379 94.213 3 -1.0434835756937308 0.3188394329047148 1.0 ['nc|ENSG00000161791|Q8IVF7-2|FMNL3', 'ENSG00000161791|ENST00000335154|FMNL3', 'nc|ENSG00000161791|Q8IVF7|FMNL3'] 80550 10878 PLLVSGIG True NCI_RA007_Epitope_Rep5 754.45889022234 754.4583449679301 48.479 1 -1.0435352082110714 0.31885319407079177 1.0 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF'] 118965 6632 VEEYFWSI True PC9_epitope_Rep1 1071.49131254943 1071.49020993586 30.314 2 -1.0435388008740598 0.31885319407079177 1.0 ['ENST00000416764.5_1_3:185686359-185693154:+|nuORF', 'ENST00000306399.3_1_3:185686359-185697623:+|nuORF'] 69110 10585 LVKTSQTL True PC9_epitope_Rep3 888.5280324113199 888.52692993586 45.662 2 -1.043572310914261 0.31885319407079177 1.0 ['ENST00000490941.1_1_3:170670926-170671100:-|nuORF', 'nc|ENSG00000118263|O75840-3|KLF7', 'nc|ENSG00000118263|O75840-2|KLF7', 'nc|ENSG00000118263|O75840-4|KLF7', 'ENSG00000118263|ENST00000309446|KLF7', 'KLF7|p.V158L|2|0.29|ENSG00000118263|chr2:207124035-207124035|C/A|missense_variant'] 32931 7308 GIQGQVLRP True NCI_RA007_Epitope_Rep1 966.5610638750999 966.55996993586 32.417 2 -1.0436014331939498 0.31886217673976974 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 127558 19225 VQVQRRKKVT True NCI_RA007_Epitope_Rep5 1240.7727879768397 1240.7716899358602 80.814 2 -1.0436864722115597 0.318910721350389 1.0 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'TRMT6|p.L275Ffs*10|1|0.1|ENSG00000089195|chr20:5942625-5942629|AAGAT/-|frameshift_variant', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 43924 6721 ILEDRPENK True NCI_RA007_Epitope_Rep1 1112.5825871653199 1112.5814899358602 30.154 2 -1.0437270178452256 0.31894244082547635 1.0 ['nc|ENSG00000138193|Q9P212-2|PLCE1', 'ENSG00000138193|ENST00000371380|PLCE1'] 126780 13723 VPSPAPLH True PC9_epitope_Rep1 816.4493881678 816.44828993586 57.634 2 -1.04372906000856 0.31894244082547635 1.0 ['ENST00000470338.1_1_22:22316666-22317191:-|nuORF'] 68482 22800 LTVFWMDFV True PC9_epitope_Rep3 1156.56270366788 1156.5616099358601 92.971 2 -1.043738062487875 0.31894244082547635 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 55408 6944 LATAQNLEVP True H1975_Epitope_Rep3 1054.56587447202 1054.56476993586 31.671 2 -1.0437501208762323 0.31894244082547635 1.0 ['ENST00000330720.6_1_19:48892924-48894655:-|nuORF', 'ENST00000594643.1_1_19:48893612-48894655:-|nuORF'] 125068 26074 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 107.92 3 -1.0437576259331973 0.31894244082547635 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 14853 8900 DYFEKYGK True NCI_RA007_Epitope_Rep3 1048.48656152216 1048.48546993586 42.095 2 -1.0438745725342649 0.31896460783796615 1.0 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'ENST00000472163.1_1_3:75263799-75264780:+|nuORF', 'nc|ENSG00000170144|P51991-2|HNRNPA3', 'ENSG00000170144|ENST00000392524|HNRNPA3'] 44739 9294 IPRDQSPSL True PC9_epitope_Rep5 1011.53490869691 1011.53380993586 40.7 2 -1.0438955063104514 0.3189735880902462 1.0 ['ENST00000595750.1_3_19:42811211-42813854:+|nuORF', 'ENST00000499536.2_1_19:42813698-42813854:+|nuORF'] 80679 14264 PLPTLVSGGTI True PC9_epitope_Rep1 1053.60701100801 1053.6059099358602 59.69 2 -1.0439164591210661 0.3190047337122061 1.0 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'nc|ENSG00000072310|P36956-6|SREBF1', 'nc|ENSG00000072310|P36956-5|SREBF1'] 12972 11673 DLPLSQDPAP True H1975_Epitope_Rep3 1051.51858992643 1051.51748993586 50.037 2 -1.0439414004424257 0.3190047337122061 1.0 ['ENST00000572418.1_1_17:3806502-3807261:-|nuORF'] 115042 8491 TTPPKQPNP True PC9_epitope_Rep1 978.5134449763399 978.51234993586 37.496 2 -1.0439592830338433 0.3190095067311876 1.0 ['ENST00000592937.1_1_19:2477660-2478092:+|nuORF'] 133750 191 WLLLKLLLLLL True PC9_epitope_Rep3 1349.9414164417299 1349.93977490379 1.0644 3 -1.0439804119856062 0.3190095067311876 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 108047 14987 TDFWKRVWMVV True H1975_Epitope_Rep1 1465.75402667821 1465.75292993586 62.892 2 -1.044010613977809 0.3190142794984376 1.0 ['ENST00000551739.5_1_12:56332068-56333318:+|nuORF', 'ENST00000552478.5_1_12:56331951-56332941:+|nuORF'] 125776 21666 VNIWRKRTRK True PC9_epitope_Rep6 1355.82622053203 1355.82457490379 96.222 3 -1.0440325787724185 0.3190142794984376 1.0 ['ENST00000534796.5_1_1:32396577-32396640:-|nuORF'] 66237 17754 LSPVDWDKP True PC9_epitope_Rep1 1055.5287606873098 1055.52766993586 73.087 2 -1.0440727320393752 0.31901905201397585 1.0 ['ENSG00000157978|ENST00000374338|LDLRAP1', 'ENST00000470950.1_1_1:25891246-25893480:+|nuORF', 'ENST00000474283.1_1_1:25890132-25893480:+|nuORF', 'ENST00000484476.5_1_1:25889538-25893480:+|nuORF'] 78325 15370 PASRPLPLPSL True PC9_epitope_Rep6 1146.67609362734 1146.6749899358601 71.268 2 -1.0440933257275764 0.31901905201397585 1.0 ['ENST00000454558.2_2_2:97203122-97203740:+|nuORF'] 89752 7389 REYVRMYHSWQ True H1975_Epitope_Rep1 1553.7197664278099 1553.7186699358601 33.426 2 -1.0441133367639381 0.31902803048282047 1.0 ['nc|ENSG00000151948|Q96MS3-2|GLT1D1', 'ENSG00000151948|ENST00000442111|GLT1D1'] 55028 6486 LALAWQEP True NCI_RA007_Epitope_Rep2 926.4861675993399 926.48506993586 29.838 2 -1.0442398838383415 0.31911611533745565 1.0 ['ENST00000278823.6_1_11:62369120-62369234:-|nuORF'] 112332 21681 TMLQQGWN True H1975_Epitope_Rep2 976.44365116436 976.44254993586 89.693 2 -1.044276783863036 0.3191382765531062 1.0 ['ENSG00000159640|ENST00000290866|ACE', 'nc|ENSG00000159640|P12821-2|ACE', 'ENST00000582678.5_1_17:61557143-61562826:+|nuORF'] 119105 7426 VEIENLPQSP True H1975_Epitope_Rep1 1124.57135377528 1124.5702499358601 33.568 2 -1.0443181364927256 0.319147253094965 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-2|EPB41L5', 'ENST00000495030.1_1_2:120858295-120865750:+|nuORF', 'ENST00000489017.5_1_2:120849230-120859177:+|nuORF', 'ENST00000461128.1_1_2:120849230-120885432:+|nuORF'] 15216 9343 EAFRLPGEAPV True PC9_epitope_Rep5 1184.61897267404 1184.61733490379 40.891 3 -1.0443820554239187 0.31915622940013183 1.0 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 98898 3936 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 21.346 2 -1.0444220543655274 0.31917418130042713 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 12668 7223 DLERAWVHP True NCI_RA007_Epitope_Rep1 1121.5617921510898 1121.5606899358602 32.085 2 -1.0444916444703272 0.31917418130042713 1.0 ['ENST00000491278.5_1_2:128392149-128394989:+|nuORF'] 18319 4791 EIVADTFR True NCI_RA007_Epitope_Rep2 949.48689587533 949.48578993586 23.266 2 -1.0445386382365651 0.31917894903366995 1.0 ['ENST00000480913.5_1_6:31695016-31697893:-|nuORF', 'ENSG00000213722|ENST00000375789|DDAH2'] 130232 15871 VTSNAALTLR True NCI_RA007_Epitope_Rep5 1044.5927579262 1044.5916699358602 67.768 2 -1.044541337750149 0.31917894903366995 1.0 ['ENSG00000154734|ENST00000284984|ADAMTS1'] 41411 8770 IASHFHAF True NCI_RA007_Epitope_Rep5 928.4555361774001 928.45442993586 40.401 2 -1.0446039263271205 0.3192274734691187 1.0 ['HYDIN|p.S3427F|1|0.33|ENSG00000157423|chr16:70879692-70879692|G/A|missense_variant'] 61647 6266 LLHGFGGG True NCI_RA007_Epitope_Rep2 756.39187329168 756.39076993586 28.978 2 -1.044805665355804 0.3193208631576172 1.0 ['ENSG00000011198|ENST00000644371|ABHD5'] 25057 21114 FDDPYALVV True PC9_epitope_Rep6 1037.5069626135698 1037.5058699358601 94.052 2 -1.0448282435230078 0.3193208631576172 1.0 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF', 'LLGL2|p.G740Afs*31|1|0.09|ENSG00000073350|chr17:75571705-75571705|G/-|frameshift_variant'] 82489 5649 PVEKREDP True H1975_Epitope_Rep2 968.4927095317598 968.49160993586 26.728 2 -1.0448910886451246 0.3193208631576172 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant', 'KMT2D|p.A3440Vfs*11|1|0.21|ENSG00000167548|chr12:49034848-49034848|G/-|frameshift_variant', 'KMT2D|p.Q3370Pfs*53|2|0.24|ENSG00000167548|chr12:49037247-49037248|-/G|frameshift_variant', 'KMT2D|p.V3089Wfs*30|1|0.39|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant', 'KMT2D|p.R3082Gfs*14|1|0.2|ENSG00000167548|chr12:49038108-49038112|TCCCG/-|frameshift_variant', 'KMT2D|p.R2687Qfs*4|1|0.4|ENSG00000167548|chr12:49039604-49039604|C/-|frameshift_variant', 'KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant'] 13506 6659 DPFSNTWAAA True H1975_Epitope_Rep2 1078.47197408718 1078.47086993586 30.522 2 -1.0448993109633269 0.3193208631576172 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 134679 4225 WWPHMGRC True PC9_epitope_Rep1 1071.45311073259 1071.4520099358601 21.145 2 -1.0449237931215503 0.3193208631576172 1.0 ['ENSG00000182771|ENST00000327946|GRID1', 'nc|ENSG00000182771|Q9ULK0-2|GRID1'] 56590 7400 LDWMHYED True PC9_epitope_Rep2 1107.4331460503101 1107.43204993586 33.843 2 -1.0449242462838237 0.3193208631576172 1.0 ['ENST00000232375.7_1_3:48555264-48555390:-|nuORF'] 68467 12086 LTVEDHYYE True H1975_Epitope_Rep3 1167.5084191655499 1167.50732993586 51.654 2 -1.0449367214205096 0.31933459875566805 1.0 ['ENSG00000163931|ENST00000462138|TKT', 'nc|ENSG00000163931|P29401-2|TKT', 'ENST00000461139.5_1_3:53259774-53265639:-|nuORF', 'ENST00000460343.5_1_3:53260493-53260973:-|nuORF'] 83521 9146 QDKNIFEHTYF True H1975_Epitope_Rep1 1440.66737941844 1440.66628993586 40.086 2 -1.044943121616124 0.31933459875566805 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant', 'ENST00000463046.5_1_2:61463458-61483580:-|nuORF'] 83366 20339 QAQRKELRLP True H1975_Epitope_Rep2 1237.7255034312498 1237.7244099358602 84.285 2 -1.0449450314423099 0.31933459875566805 1.0 ['nc|ENSG00000162852|Q6PJW8-2|CNST', 'ENSG00000162852|ENST00000366513|CNST'] 64939 17191 LSCHCHSC True PC9_epitope_Rep5 888.3040635404002 888.30296993586 71.145 2 -1.0449603636765876 0.3193393615058129 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 63227 10915 LNYWVWTK True H1975_Epitope_Rep1 1108.5705659296398 1108.56946993586 46.947 2 -1.0449865881264029 0.3193393615058129 1.0 ['ENST00000369975.5_1_6:76564903-76564942:+|nuORF'] 83962 6406 QELLKDRDP True H1975_Epitope_Rep2 1112.5825871653199 1112.5814899358602 29.564 2 -1.045095311836964 0.31942741903594446 1.0 ['ENST00000550627.5_1_19:15793132-15807110:+|nuORF', 'ENST00000518629.7_2_19:15791179-15807110:+|nuORF', 'CYP4F12|p.V427Sfs*52|1|0.23|ENSG00000186204|chr19:15696187-15696187|G/-|frameshift_variant', 'ENSG00000186204|ENST00000550308|CYP4F12'] 95559 8897 SASERAKRRFW True H1975_Epitope_Rep1 1392.7374650972797 1392.73636993586 39.127 2 -1.0451136927479767 0.3194495703063215 1.0 ['ENST00000562140.2_1_16:70404228-70404267:+|nuORF'] 12498 8630 DLAAEDLVR True H1975_Epitope_Rep1 1000.5189242795999 1000.51782993586 38.123 2 -1.0451644420709052 0.31948490160671683 1.0 ['nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-2|SKOR1'] 78766 6693 PEISHVNFRMF True NCI_RA007_Epitope_Rep1 1375.6706909770699 1375.6695899358601 30.044 2 -1.0452994519140169 0.3195729537366548 1.0 ['ENSG00000131848|ENST00000683990|ZSCAN5A', 'ENST00000592101.1_1_19:56735938-56736358:-|nuORF'] 99893 18704 SLHRLCPLF True PC9_epitope_Rep1 1084.5851704479599 1084.58406993586 76.734 2 -1.0453898295403334 0.3196610035454917 1.0 ['ENST00000563328.4_1_16:72699075-72699198:+|nuORF'] 110496 12601 TIQDLFPKVMK True NCI_RA007_Epitope_Rep1 1318.7318942513 1318.73078993586 52.998 2 -1.0455186980569326 0.3197580166857775 1.0 ['ENSG00000268104|ENST00000598581|SLC6A14'] 14745 16732 DVVKVLSKTTE True NCI_RA007_Epitope_Rep1 1217.68671788069 1217.68617496793 69.207 1 -1.0455264578586754 0.3197580166857775 1.0 ['ENSG00000214193|ENST00000453908|SH3D21', 'nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21'] 28255 3568 FRTHFGGG True PC9_epitope_Rep3 877.4194850218497 877.41838993586 18.846 2 -1.045586703684249 0.3197669821019058 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 97096 8981 SFALEMQMYGP True NCI_RA007_Epitope_Rep1 1272.551881284 1272.5507899358602 38.935 2 -1.0456030431218193 0.31977173282724447 1.0 ['ENST00000480273.5_1_20:62318929-62319157:+|nuORF'] 41627 11909 IDHDLDFSP True PC9_epitope_Rep1 1057.47163973401 1057.4705499358602 50.674 2 -1.0456098005509333 0.31977173282724447 1.0 ['ENSG00000121053|ENST00000225371|EPX'] 14411 2830 DTHINIHKAQ True NCI_RA007_Epitope_Rep1 1175.60471959223 1175.60308490379 14.834 3 -1.045626480106004 0.3197806977081329 1.0 ['nc|ENSG00000082512|O00463-3|TRAF5', 'ENSG00000082512|ENST00000261464|TRAF5', 'nc|ENSG00000082512|O00463-2|TRAF5'] 46506 8139 ITPPRYRA True H1975_Epitope_Rep2 972.5504991914 972.54940993586 36.256 2 -1.0457135948900294 0.3198555576056301 1.0 ['ENSG00000169174|ENST00000302118|PCSK9'] 103858 22636 SRKLCKKMK True PC9_epitope_Rep6 1120.6572898424 1120.65618993586 100.11 2 -1.045789013993088 0.31987770002240407 1.0 ['PDIA5-DIRC2|1|fusion', 'nc|ENSG00000065485|Q14554-2|PDIA5', 'ENSG00000065485|ENST00000316218|PDIA5'] 67743 7726 LTGRFSHR True H1975_Epitope_Rep3 972.52534707272 972.52424993586 34.701 2 -1.045864607688261 0.3199351616346648 1.0 ['nc|ENSG00000134910|P46977-2|STT3A', 'ENSG00000134910|ENST00000392708|STT3A', 'ENST00000525431.1_1_11:125476222-125478225:+|nuORF', 'ENST00000534472.5_1_11:125465789-125479519:+|nuORF'] 134172 25577 WRKVLLKG True PC9_epitope_Rep3 998.6389202729798 998.6378299358599 103.87 2 -1.0458647259150862 0.3199351616346648 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 70190 13777 LYLLSISRLF True PC9_epitope_Rep1 1223.7277948470298 1223.72614490379 57.84 3 -1.0458962092430077 0.31995730212698664 1.0 ['ENST00000566111.5_1_1:158970052-158970124:+|nuORF'] 36621 23308 GVLLLWLRME True PC9_epitope_Rep2 1228.7002002001998 1228.69967496793 95.13 1 -1.045916870317753 0.31996257593527216 1.0 ['AluSp_dup1142|chr1:32231212-32231509:+|1.346433214745646|0.2089834518128584|2.69|502.0|22|3|anti-sense'] 130402 8752 VTVPPDVFFF True NCI_RA007_Epitope_Rep3 1166.60119735158 1166.60010993586 41.515 2 -1.0459393704591289 0.31996257593527216 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 86488 6511 QQWTYEQRKV True NCI_RA007_Epitope_Rep5 1364.6836981889196 1364.68260993586 31.71 2 -1.0459548185622627 0.31996257593527216 1.0 ['ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENST00000466526.1_1_1:160147295-160152563:+|nuORF', 'nc|ENSG00000132681|Q13733-2|ATP1A4'] 60096 10880 LHTEECNVL True PC9_epitope_Rep4 1056.4909952796 1056.4898899358602 49.615 2 -1.0459820136721922 0.31996257593527216 1.0 ['ENSG00000103121|ENST00000219400|CMC2'] 56736 20609 LEALEMYKD True PC9_epitope_Rep5 1110.5267120819801 1110.52560993586 84.321 2 -1.045993929449585 0.31996257593527216 1.0 ['ENSG00000173473|ENST00000254480|SMARCC1', 'SMARCC1|p.L702Ffs*34|1|0.17|ENSG00000173473|chr3:47662386-47662387|-/A|frameshift_variant', 'SMARCC1|p.W642C|1|0.75|ENSG00000173473|chr3:47662566-47662566|C/G|missense_variant', 'ENSG00000139613|ENST00000550164|SMARCC2', 'SMARCC2|p.K898Sfs*42|1|0.2|ENSG00000139613|chr12:56168124-56168124|T/-|frameshift_variant', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2'] 60683 6711 LIVPGGVK True H1975_Epitope_Rep3 781.50617476793 781.50506993586 30.769 2 -1.046090016852129 0.31998524199180406 1.0 ['nc|ENSG00000113657|Q14195|DPYSL3', 'DPYSL3|p.A516Qfs*15|1|0.67|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant', 'ENSG00000113657|ENST00000343218|DPYSL3', 'ENST00000519672.1_1_5:146788331-146833150:-|nuORF', 'nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2', 'ENST00000511535.1_1_4:5823489-5889136:-|nuORF', 'nc|ENSG00000072832|Q14194|CRMP1', 'ENSG00000072832|ENST00000324989|CRMP1'] 99536 15905 SLEVHLSTHTV True PC9_epitope_Rep5 1221.63535101417 1221.63424993586 66.169 2 -1.046101056150016 0.31998524199180406 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384'] 73348 5847 NENLHQLTLQ True NCI_RA007_Epitope_Rep2 1208.6149499227602 1208.6138499358601 27.361 2 -1.0461167588451412 0.31998524199180406 1.0 ['nc|ENSG00000142748|O75636-2|FCN3', 'ENSG00000142748|ENST00000270879|FCN3'] 3837 11754 AGYRKDLGVP True PC9_epitope_Rep2 1074.5821932425 1074.58108993586 50.544 2 -1.0461208982725123 0.31998524199180406 1.0 ['ENSG00000163395|ENST00000335211|IGFN1'] 137577 14828 YLSPTFKEF True NCI_RA007_Epitope_Rep3 1130.56481184286 1130.56370993586 65.754 2 -1.0461307636685264 0.3199942022874611 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 134173 25460 WRKVLLKG True PC9_epitope_Rep5 998.6389202729798 998.6378299358599 103.17 2 -1.0461439761619007 0.3200252984425646 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 133578 12025 WIEQSVFRQWF True PC9_epitope_Rep4 1524.75138382592 1524.74917987172 54.055 4 -1.0461766070356255 0.3200252984425646 1.0 ['ENSG00000180346|ENST00000603357|TIGD2'] 12714 15050 DLFQRGYYQIR True H1975_Epitope_Rep3 1457.7415474182098 1457.7404499358602 63.284 2 -1.0463215323677797 0.32009170322937663 1.0 ['ENSG00000147724|ENST00000395297|FAM135B', 'FAM135B|p.E567Dfs*21|1|0.11|ENSG00000147724|chr8:138152774-138152774|T/-|frameshift_variant', 'FAM135B|p.G820Efs*13|1|0.31|ENSG00000147724|chr8:138152016-138152016|C/-|frameshift_variant', 'FAM135B|p.P976Rfs*14|1|0.2|ENSG00000147724|chr8:138151548-138151548|G/-|frameshift_variant', 'FAM135B|p.E1018Rfs*69|1|0.5|ENSG00000147724|chr8:138151423-138151424|-/T|frameshift_variant', 'nc|ENSG00000147724|Q49AJ0-3|FAM135B', 'nc|ENSG00000147724|Q49AJ0-4|FAM135B'] 60207 17516 LICCCCTM True PC9_epitope_Rep3 888.3035951582001 888.30248993586 72.558 2 -1.0463365532167201 0.32009170322937663 1.0 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6', 'SLC12A6|p.A267Lfs*18|1|0.28|ENSG00000140199|chr15:34255326-34255339|CAGAGGCCAACAGC/-|frameshift_variant'] 25116 12539 FDLNRHWL True PC9_epitope_Rep1 1099.55631284783 1099.5552099358601 53.102 2 -1.04635190487859 0.32009170322937663 1.0 ['ENSG00000186094|ENST00000371839|AGBL4', 'nc|ENSG00000186094|Q5VU57-2|AGBL4'] 90625 16000 RKKKLKKKKTL True PC9_epitope_Rep5 1397.9922232279696 1397.99056490379 66.534 3 -1.046370948839447 0.3201096193625739 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 65908 9027 LSLGNQSLPHS True H1975_Epitope_Rep1 1151.59348620219 1151.5923899358602 39.629 2 -1.0463728566266464 0.3201096193625739 1.0 ['ENSG00000163482|ENST00000295709|STK36', 'nc|ENSG00000163482|Q9NRP7-2|STK36'] 9604 17071 AYELLRGRR True H1975_Epitope_Rep2 1132.6465248345598 1132.6454299358602 70.928 2 -1.046445461054402 0.32014492753623186 1.0 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A'] 102441 21284 SPWPSQAG True H1975_Epitope_Rep2 828.37661715036 828.37552993586 88.08 2 -1.0465307447394396 0.3201628415588522 1.0 ['ENSG00000136378|ENST00000388820|ADAMTS7'] 41672 11816 IDKWAIADAQ True PC9_epitope_Rep5 1129.5767735088898 1129.57566993586 50.446 2 -1.0465505477936954 0.3201628415588522 1.0 ['SOS1|p.E1074Kfs*32|1|0.33|ENSG00000115904|chr2:38995248-38995249|TC/-|frameshift_variant', 'ENSG00000115904|ENST00000402219|SOS1', 'nc|ENSG00000115904|Q07889-2|SOS1', 'SOS2|p.P1259*|1|0.09|ENSG00000100485|chr14:50118556-50118569|GAGGAGTGCTTGGC/-|frameshift_variant', 'ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 134239 20348 WRRRPRTRR True H1975_Epitope_Rep3 1338.7969860924197 1338.79588993586 85.085 2 -1.0466882814274976 0.3201939291736931 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 95539 7713 SAQTHFAA True PC9_epitope_Rep4 831.3875161872298 831.38640993586 37.055 2 -1.0467174400859156 0.3201939291736931 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 119797 7277 VEVEHHGRMLK True H1975_Epitope_Rep3 1333.69248905081 1333.6913899358601 32.965 2 -1.0467274002854483 0.32020288518542916 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2'] 19555 19978 ELQVLEKFF True PC9_epitope_Rep2 1151.6226610721499 1151.6215699358602 82.247 2 -1.046752012961841 0.3202076224854098 1.0 ['ENSG00000180182|ENST00000324817|MED14'] 85861 15644 QNFQVLMI True PC9_epitope_Rep6 991.5160878286298 991.51498993586 72.379 2 -1.0467591134127947 0.3202076224854098 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 81614 25243 PRPRKRAKVED True PC9_epitope_Rep2 1350.7844152896998 1350.7833099358602 102.77 2 -1.046808287089022 0.32022975180481633 1.0 ['nc|ENSG00000059122|Q4VC44-3|FLYWCH1', 'nc|ENSG00000059122|Q4VC44-4|FLYWCH1', 'nc|ENSG00000059122|Q4VC44-2|FLYWCH1', 'ENSG00000059122|ENST00000253928|FLYWCH1'] 127313 12412 VQMKHLLR True PC9_epitope_Rep1 1023.6011548652698 1023.60004993586 52.605 2 -1.046861591893435 0.32024766170465024 1.0 ['ENSG00000131697|ENST00000378156|NPHP4', 'nc|ENSG00000131697|O75161-2|NPHP4'] 87311 19881 QSVMLALRR True PC9_epitope_Rep2 1072.6175332053997 1072.6164299358602 81.865 2 -1.0468637852399423 0.32024766170465024 1.0 ['ENSG00000172247|ENST00000302514|C1QTNF4'] 46033 8152 ISVPAPVAAAA True H1975_Epitope_Rep2 965.5545815123298 965.5540349679301 36.306 1 -1.0468854869322244 0.3202566163006679 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 26456 17465 FINLSNVLL True PC9_epitope_Rep4 1031.60153170475 1031.6004299358601 75.176 2 -1.0469112532177944 0.3202834786732355 1.0 ['ENSG00000163075|ENST00000413369|CFAP221', 'nc|ENSG00000163075|Q4G0U5-4|CFAP221', 'nc|ENSG00000163075|Q4G0U5-3|CFAP221', 'ENST00000413057.6_1_2:120317267-120388537:+|nuORF'] 15670 5958 ECGIAYGDK True NCI_RA007_Epitope_Rep2 954.4116823297398 954.41058993586 27.785 2 -1.0469119146797121 0.3202834786732355 1.0 ['ENSG00000141458|ENST00000269228|NPC1'] 23492 16490 EWDAFDLKTK True H1975_Epitope_Rep3 1251.6135529404298 1251.61244993586 68.92 2 -1.0469141726442484 0.3202834786732355 1.0 ['ENST00000460138.5_1_6:7882234-7882414:-|nuORF'] 22611 13557 ETPVTLQAPP True H1975_Epitope_Rep2 1051.55497543515 1051.5538699358601 57.284 2 -1.0469430686579766 0.32030560495290783 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 23323 12287 EVTDKYFH True H1975_Epitope_Rep1 1037.48181049489 1037.4807099358602 52.286 2 -1.0469710741485219 0.32031033892277094 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1'] 90039 6150 RGGMNKGG True NCI_RA007_Epitope_Rep2 775.3759059577098 775.37480993586 28.53 2 -1.046996651296135 0.32031033892277094 1.0 ['ENSG00000130749|ENST00000253048|ZC3H4'] 118048 24695 VATIKETGL True PC9_epitope_Rep2 930.5385970950199 930.53750993586 100.67 2 -1.0470367641049494 0.3203282445764565 1.0 ['ENST00000392557.8_1_14:105676521-105676869:-|nuORF'] 5266 5563 ALREHEKLFM True NCI_RA007_Epitope_Rep5 1272.66487732064 1272.66322490379 28.083 3 -1.047057803236363 0.3203282445764565 1.0 ['YEATS2-ATP11B|1|fusion', 'ENST00000490303.5_1_3:182583321-182631816:+|nuORF', 'ENSG00000058063|ENST00000323116|ATP11B'] 67786 9422 LTHLYSHLK True H1975_Epitope_Rep1 1110.6185787512202 1110.61748993586 41.154 2 -1.0471125883487835 0.32036354056902 1.0 ['ENSG00000086544|ENST00000263370|ITPKC'] 67049 2076 LTARRLLPLRL True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 10.754 3 -1.0471264354561374 0.320385664045521 1.0 ['ENSG00000103150|ENST00000262430|MLYCD'] 120819 5836 VGDHISAVN True PC9_epitope_Rep5 910.45084471978 910.44974993586 27.44 2 -1.047148455755304 0.32039461552646137 1.0 ['ENSG00000081026|ENST00000307546|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-1|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-3|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-2|MAGI3'] 81684 1970 PRSSSLWIELC True PC9_epitope_Rep2 1289.6438075228898 1289.64217490379 11.104 3 -1.0471714205517244 0.32040356677159754 1.0 ['ENST00000393437.7_2_2:100900079-100900241:-|nuORF'] 19913 4317 ELWWSQQPRRS True H1975_Epitope_Rep3 1471.7320453636698 1471.7303849037899 21.722 3 -1.0471775394324951 0.320409318986975 1.0 ['ENSG00000179178|ENST00000439858|TMEM125'] 24029 14104 EYPTKYRMFIW True H1975_Epitope_Rep3 1532.7486069446 1532.74750993586 59.579 2 -1.0471963562847935 0.320409318986975 1.0 ['ENST00000524307.5_1_8:124089445-124141439:+|nuORF', 'nc|ENSG00000156787|Q96DN5-3|TBC1D31', 'nc|ENSG00000156787|Q96DN5-2|TBC1D31', 'ENSG00000156787|ENST00000287380|TBC1D31'] 12183 19155 DILKDNWSP True PC9_epitope_Rep1 1086.5345743437401 1086.53346993586 78.473 2 -1.0472296707286344 0.320409318986975 1.0 ['nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'UBE2E3|p.A156T|1|0.3|ENSG00000170035|chr2:181060752-181060752|G/A|missense_variant', 'UBE2E3|p.A156S|1|0.16|ENSG00000170035|chr2:181060752-181060752|G/T|missense_variant', 'ENST00000411687.1_1_X:14262689-14263010:+|nuORF', 'ENST00000493707.1_1_3:23907959-23932094:+|nuORF', 'ENST00000475680.5_1_3:23852460-23932094:+|nuORF', 'nc|ENSG00000170142|P51965-2|UBE2E1', 'UBE2E3|p.L169Ffs*2|1|0.35|ENSG00000170035|chr2:181060789-181060789|C/-|frameshift_variant', 'ENSG00000182247|ENST00000396703|UBE2E2', 'ENSG00000170035|ENST00000410062|UBE2E3'] 111933 15927 TLRWVRKTPWY True H1975_Epitope_Rep1 1504.8303028529597 1504.82920993586 66.574 2 -1.0472372665726248 0.320409318986975 1.0 ['nc|ENSG00000035403|P18206-2|VCL', 'ENSG00000035403|ENST00000211998|VCL'] 62393 24035 LLRRRLRQWRW True NCI_RA007_Epitope_Rep1 1637.9855151380898 1637.98387490379 99.499 3 -1.0472387124947242 0.320409318986975 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 8997 8109 AVHSQTIQIP True NCI_RA007_Epitope_Rep2 1092.5927579262 1092.5916699358602 36.176 2 -1.0472672156170062 0.320409318986975 1.0 ['ENSG00000188153|ENST00000328300|COL4A5', 'nc|ENSG00000188153|P29400|COL4A5', 'ENSG00000187498|ENST00000375820|COL4A1'] 131412 429 VVTKEKLLLE True PC9_epitope_Rep5 1170.72237511342 1170.72073490379 2.3865 3 -1.0472754997419367 0.320409318986975 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 78782 16793 PEKQRNKVLLE True NCI_RA007_Epitope_Rep3 1352.77759857376 1352.77650993586 73.904 2 -1.0472874901179992 0.320409318986975 1.0 ['nc|ENSG00000171004|Q96MM7|HS6ST2', 'ENSG00000171004|ENST00000370833|HS6ST2', 'nc|ENSG00000171004|Q96MM7-2|HS6ST2', 'nc|ENSG00000171004|Q96MM7-3|HS6ST2'] 66369 7647 LSQYPMMRGP True NCI_RA007_Epitope_Rep3 1178.55763537078 1178.55652993586 37.204 2 -1.0472898763174632 0.3204140492276086 1.0 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2'] 104506 8943 SSPVTTTDML True PC9_epitope_Rep2 1050.49032657326 1050.48922993586 39.757 2 -1.0473174185977818 0.3204140492276086 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant'] 56399 5840 LDSALVVGAA True PC9_epitope_Rep6 914.5072969667399 914.50618993586 30.681 2 -1.0474462552330441 0.3204361682513762 1.0 ['ENST00000607874.1_2_X:129115199-129115295:+|nuORF'] 108109 9628 TDLRLHSGEVK True H1975_Epitope_Rep3 1253.67279915205 1253.67170993586 42.05 2 -1.047524289414061 0.32044511753473365 1.0 ['nc|ENSG00000163026|Q9H6R7-2|WDCP', 'ENSG00000163026|ENST00000295148|WDCP'] 127691 19898 VRGKICWL True NCI_RA007_Epitope_Rep2 973.55314204369 973.5520499358599 82.397 2 -1.0475513433572021 0.3204540665823852 1.0 ['ENST00000458113.6_1_17:15983677-15983818:-|nuORF'] 37266 17550 GVVKLQRRH True NCI_RA007_Epitope_Rep3 1091.6675946323098 1091.66707496793 76.996 1 -1.047627374513796 0.32046301539434 1.0 ['PLCB2|p.A1136Qfs*3|1|0.32|ENSG00000137841|chr15:40288867-40288867|C/-|frameshift_variant', 'nc|ENSG00000137841|Q00722-3|PLCB2', 'nc|ENSG00000137841|Q00722-2|PLCB2', 'ENSG00000137841|ENST00000260402|PLCB2', 'ENST00000558588.5_1_15:40581558-40583812:-|nuORF'] 58713 18898 LFKRVKCIS True PC9_epitope_Rep6 1092.6477707045199 1092.64666993586 85.337 2 -1.0476437245657453 0.3204983012457531 1.0 ['MGRN1-C16orf96|2|fusion', 'ENSG00000205832|ENST00000444310|C16orf96'] 131340 20224 VVRRPPIHRR True NCI_RA007_Epitope_Rep2 1284.8003401373599 1284.7987049037902 83.698 3 -1.0476852066347406 0.3205072492395212 1.0 ['ENSG00000170776|ENST00000394518|AKAP13'] 88828 15985 RDVQPVAYEEP True PC9_epitope_Rep5 1301.6251802532897 1301.62354490379 66.477 3 -1.04771193573024 0.32051619699762973 1.0 ['ENSG00000113658|ENST00000545279|SMAD5'] 78538 10052 PDLSWLKN True H1975_Epitope_Rep1 971.5076313199099 971.50652993586 43.604 2 -1.0477165926009677 0.3205167033169614 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant', 'HMCN1|p.E3102Vfs*9|1|0.2|ENSG00000143341|chr1:186087585-186087586|AG/-|frameshift_variant', 'HMCN1-IGLL5|1|fusion'] 41458 15150 IAWEPVQYFN True PC9_epitope_Rep3 1265.6080736371698 1265.60641490379 63.415 3 -1.0477428022162443 0.3205167033169614 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 7441 9886 ASDFQFCWNQ True H1975_Epitope_Rep3 1244.49205790876 1244.4909699358602 43.057 2 -1.0477782127209863 0.3205167033169614 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'ENST00000481242.5_1_9:130127572-130155530:+|nuORF', 'ENST00000496711.5_1_9:130126995-130155530:+|nuORF'] 135873 18975 YERRSRPR True NCI_RA007_Epitope_Rep2 1118.6057226517398 1118.6046299358602 78.663 2 -1.0478066020317272 0.32053459740601753 1.0 ['nc|ENSG00000290842|Q8IVE0|CROCCP3', 'ENST00000591348.5_1_1:16802327-16812083:-|nuORF'] 69696 5267 LVYHYILILNI True NCI_RA007_Epitope_Rep1 1372.8118588241598 1372.81021490379 24.569 3 -1.047830358397671 0.32053459740601753 1.0 ['ENST00000356891.3_1_12:88442188-88442284:+|nuORF'] 127102 10171 VQATEIHNI True PC9_epitope_Rep1 1023.5349086969098 1023.53380993586 43.999 2 -1.0478483908452856 0.32054354409712166 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 138094 18790 YQFGEIRTI True PC9_epitope_Rep5 1125.5818588893299 1125.5807699358602 77.289 2 -1.0479352180983665 0.32057882470670335 1.0 ['nc|ENSG00000086589|Q9NW64-2|RBM22', 'ENSG00000086589|ENST00000199814|RBM22', 'ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 89876 21043 RFPFWGASFL True PC9_epitope_Rep2 1226.6236641316598 1226.62201490379 86.396 3 -1.0479903984090173 0.32058354948715584 1.0 ['ENST00000392562.5_1_17:73401186-73401555:-|nuORF'] 56593 16483 LDWPFPQV True PC9_epitope_Rep5 1000.5018176634798 1000.50072993586 68.4 2 -1.0480011944555394 0.32058354948715584 1.0 ['ENST00000465046.1_1_17:18149056-18149185:-|nuORF'] 90714 23708 RKNRRRRLGFN True PC9_epitope_Rep4 1471.8708793086696 1471.86922490379 99.55 3 -1.0480837511079881 0.3206056616194865 1.0 ['ENST00000398645.6_1_11:66887311-66947572:+|nuORF'] 84406 6969 QGEVTVASIDD True PC9_epitope_Rep4 1132.52479750568 1132.52370993586 34.046 2 -1.048084440526115 0.3206103855066358 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 30961 8003 GASSWEAAGPP True NCI_RA007_Epitope_Rep5 1028.4563240230398 1028.4552299358602 37.477 2 -1.048105244807661 0.3206103855066358 1.0 ['BAHD1|p.G267W|1|0.17|ENSG00000140320|chr15:40459263-40459263|G/T|missense_variant'] 88630 26161 RARAKSFLKRM True H1975_Epitope_Rep3 1362.8030425593 1362.8014049037902 109.01 3 -1.0481216626793075 0.3206193303753637 1.0 ['nc|ENSG00000133121|Q9Y3M8-3|STARD13', 'nc|ENSG00000133121|Q9Y3M8-4|STARD13', 'nc|ENSG00000133121|Q9Y3M8-2|STARD13', 'ENSG00000133121|ENST00000336934|STARD13', 'nc|ENSG00000133121|Q9Y3M8-5|STARD13'] 90628 3417 RKKKQLMRLR True NCI_RA007_Epitope_Rep1 1355.8659771690297 1355.86432490379 17.19 3 -1.0481817652076004 0.3206414408721068 1.0 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF'] 40310 23441 HRRKKRRTC True H1975_Epitope_Rep2 1239.7207099176699 1239.71905490379 96.637 3 -1.0481965577295773 0.3206503850964387 1.0 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF'] 78640 17737 PDWIALHTSR True PC9_epitope_Rep6 1194.6145559999397 1194.6129149037902 80.859 3 -1.048275249194849 0.3206856601190163 1.0 ['ENSG00000088035|ENST00000263440|ALG6'] 83815 7158 QEETKTVL True PC9_epitope_Rep1 946.4971262058599 946.49602993586 32.344 2 -1.0482923609769585 0.32068615963875247 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 79054 23596 PFRKCKLRISN True PC9_epitope_Rep2 1360.7761591051196 1360.77506993586 96.231 2 -1.048297824685938 0.32068615963875247 1.0 ['ENST00000547492.1_1_12:58329583-58329670:-|nuORF'] 78143 5330 PAPLRAAPA True PC9_epitope_Rep2 862.5024863698198 862.50138993586 25.891 2 -1.0482986474408118 0.32068615963875247 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 121655 24077 VGLHQLLESRK True PC9_epitope_Rep3 1278.7408191422198 1278.7397299358602 97.898 2 -1.0483691067932221 0.32072143233280676 1.0 ['ENSG00000124783|ENST00000244763|SSR1', 'nc|ENSG00000124783|P43307-2|SSR1'] 25039 119 FDDGDCCD True PC9_epitope_Rep5 888.226583982 888.22548993586 0.68138 2 -1.048378198573879 0.3207303747975935 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 107805 18848 TAPENQKFI True PC9_epitope_Rep1 1046.53965972418 1046.53856993586 77.284 2 -1.0484223823887102 0.32075248150390984 1.0 ['ENSG00000119514|ENST00000375011|GALNT12', 'nc|ENSG00000119514|Q8IXK2-2|GALNT12'] 7315 20254 ARRYPIRGF True NCI_RA007_Epitope_Rep3 1134.6410455312996 1134.63940490379 88.242 3 -1.0484354248397787 0.32076142332451324 1.0 ['ENSG00000277535|ENST00000620151|CT47C1'] 69199 21392 LVMQQQHQ True PC9_epitope_Rep4 1010.4967493663801 1010.49564993586 90.453 2 -1.0486192443752158 0.3208451260448891 1.0 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5', 'HDAC5|p.L646Sfs*24|1|0.2|ENSG00000108840|chr17:44086686-44086686|G/-|frameshift_variant'] 111084 10563 TLEDTQQL True H1975_Epitope_Rep1 946.46074069714 946.4601949679301 45.582 1 -1.0486478816894746 0.3208451260448891 1.0 ['ENST00000380680.4_1_13:30340900-30340981:-|nuORF'] 131307 19837 VVQSVKHTKR True NCI_RA007_Epitope_Rep4 1180.70403971068 1180.70294993586 85.74 2 -1.0486634181214127 0.3208672300766132 1.0 ['ENSG00000184304|ENST00000331968|PRKD1'] 41674 22281 IDKWEDRWEWL True PC9_epitope_Rep1 1574.7517777487396 1574.75068993586 90.515 2 -1.0486959573911474 0.32088933352639964 1.0 ['ENSG00000115306|ENST00000356805|SPTBN1', 'nc|ENSG00000115306|Q01082-2|SPTBN1', 'nc|ENSG00000115306|Q01082-3|SPTBN1', 'ENST00000496323.1_1_2:54880712-54887220:+|nuORF', 'FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion'] 12928 10386 DLNLFPPT True NCI_RA007_Epitope_Rep1 915.4701831820299 915.46908993586 44.382 2 -1.048723876709327 0.3208898249308938 1.0 ['ENST00000234310.7_1_2:68479316-68479514:-|nuORF'] 35974 22223 GVAVMKLFNKA True PC9_epitope_Rep5 1176.66890007192 1176.66780993586 90.486 2 -1.0487412324373644 0.3208898249308938 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3'] 1557 8403 AEEYGPSPGE True H1975_Epitope_Rep2 1034.4192698079798 1034.41816993586 37.275 2 -1.0487478547142446 0.3208898249308938 1.0 ['ENSG00000144045|ENST00000404568|DQX1', 'nc|ENSG00000144045|Q8TE96-3|DQX1', 'DQX1|p.L288Ffs*74|1|0.15|ENSG00000144045|chr2:74523490-74523490|C/-|frameshift_variant', 'ENST00000473508.1_1_2:74750418-74753390:-|nuORF'] 78271 4863 PARPTLLEQV True PC9_epitope_Rep5 1122.6397081186199 1122.63805490379 23.746 3 -1.0487791360158163 0.3208987640020534 1.0 ['ENSG00000133111|ENST00000255476|RFXAP'] 78496 7476 PDGENVKIPV True H1975_Epitope_Rep1 1066.56587447202 1066.56476993586 33.755 2 -1.0488346566269273 0.3209034788674924 1.0 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'nc|ENSG00000141736|P04626-2|ERBB2', 'nc|ENSG00000141736|P04626-3|ERBB2', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF'] 123592 2738 VIKFLIIIA True PC9_epitope_Rep6 1028.6997891940398 1028.69868993586 15.786 2 -1.0488353049527779 0.3209034788674924 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 99449 11232 SLEKIFKE True PC9_epitope_Rep1 992.5542471591599 992.55314993586 48.084 2 -1.0489008669981696 0.3209387422012794 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP', 'ENST00000473914.1_1_5:96332105-96341995:+|nuORF'] 137515 16714 YLQEIQTQL True PC9_epitope_Rep5 1134.5920892198599 1134.59098993586 69.297 2 -1.0489276560980458 0.3209608423823626 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'SENP7|p.C683Ffs*13|1|0.29|ENSG00000138468|chr3:101343744-101343744|C/-|frameshift_variant', 'nc|ENSG00000138468|Q9BQF6-4|SENP7'] 137698 14555 YMLWFRCV True NCI_RA007_Epitope_Rep2 1116.52487869052 1116.5237899358601 61.279 2 -1.0489431644570195 0.3209829419816784 1.0 ['MYO15A|p.R3295C|1|0.21|ENSG00000091536|chr17:18166456-18166456|C/T|missense_variant'] 130074 10527 VTQKLPNILC True PC9_epitope_Rep1 1127.63726559047 1127.6356049037902 45.382 3 -1.0490000981897647 0.32101397773039564 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 122055 4338 VGQVDDTRRK True NCI_RA007_Epitope_Rep4 1172.6261833127999 1172.6250899358602 23.029 2 -1.0490001466200805 0.32101397773039564 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 19593 12914 ELRIAKIY True H1975_Epitope_Rep2 1004.6018660579198 1004.60076993586 54.787 2 -1.0490141020072203 0.32102291422629936 1.0 ['nc|ENSG00000100206|Q14565-2|DMC1', 'ENSG00000100206|ENST00000216024|DMC1'] 42851 20228 IFNSELEFAQI True H1975_Epitope_Rep1 1309.65541775241 1309.65432993586 84.155 2 -1.0490495280485084 0.32104501184522244 1.0 ['nc|ENSG00000168675|O15165-2|LDLRAD4', 'ENSG00000168675|ENST00000359446|LDLRAD4'] 82586 6077 PVHSGNLHIQ True NCI_RA007_Epitope_Rep5 1100.5726911879601 1100.5715899358602 30.057 2 -1.049083858607972 0.32104549701907004 1.0 ['ENSG00000254245|ENST00000253812|PCDHGA3', 'nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3', 'PCDHGA3|p.D219H|1|0.58|ENSG00000254245|chr5:141344688-141344688|G/C|missense_variant'] 63360 8928 LPETRKSIT True NCI_RA007_Epitope_Rep3 1043.59750895347 1043.59640993586 42.201 2 -1.0490839971074235 0.32104549701907004 1.0 ['ENST00000550513.1_1_12:53689756-53691495:+|nuORF'] 121530 12293 VGKKYHNSANK True PC9_epitope_Rep1 1244.6625688215197 1244.6614699358602 52.139 2 -1.0491344097752542 0.32104549701907004 1.0 ['nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10'] 101433 1875 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 10.207 2 -1.049215841320453 0.3210807538429143 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 31080 9604 GAWRGWLGGW True NCI_RA007_Epitope_Rep3 1144.5566472009998 1144.5555499358602 44.861 2 -1.0492286320831317 0.3210896887543594 1.0 ['ENST00000395184.5_1_4:86396395-86396566:+|nuORF'] 121412 18491 VGHWAETLSL True PC9_epitope_Rep5 1111.56620882519 1111.5651099358602 76.149 2 -1.049255503461429 0.3211075578717412 1.0 ['ENSG00000198822|ENST00000361669|GRM3'] 101697 13643 SPGDYVPKEHI True H1975_Epitope_Rep1 1240.6088019131598 1240.6077099358602 57.61 2 -1.049264859351618 0.3211075578717412 1.0 ['nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B'] 57499 16220 LEKLRIQY True H1975_Epitope_Rep2 1061.62332977849 1061.62222993586 67.599 2 -1.0492932410263995 0.3211164920776965 1.0 ['ENST00000470800.1_1_21:30518012-30547210:+|nuORF', 'ENSG00000156265|ENST00000399928|MAP3K7CL', 'nc|ENSG00000156265|P57077-1|MAP3K7CL'] 63307 24479 LPCRFKYR True PC9_epitope_Rep2 1081.58550480113 1081.58440993586 99.748 2 -1.0493404698124702 0.321134841366968 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF', 'ENST00000536689.5_1_19:10664629-10668377:-|nuORF', 'KRI1|p.T527A|1|0.35|ENSG00000129347|chr19:10557590-10557590|T/C|missense_variant'] 27172 18517 FLSIFFFFFFF True PC9_epitope_Rep4 1507.7580323461495 1507.7563949037901 79.299 3 -1.0493495235211516 0.321134841366968 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|119|2|anti-sense'] 36495 5371 GVKGAKIK True NCI_RA007_Epitope_Rep3 799.5279728416699 799.52686993586 28.134 2 -1.0493618564066811 0.321134841366968 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 28980 19791 FTHAKTKTL True PC9_epitope_Rep5 1045.5920296502102 1045.59092993586 81.171 2 -1.0493660501907023 0.321134841366968 1.0 ['ENSG00000162654|ENST00000355754|GBP4', 'ENSG00000213512|ENST00000294671|GBP7'] 108070 7798 TDKWSSISR True NCI_RA007_Epitope_Rep1 1078.54072235334 1078.5396299358601 34.323 2 -1.0493925482903372 0.321134841366968 1.0 ['ENST00000483956.1_1_3:127783757-127783923:+|nuORF'] 112087 16327 TLTNMNRYYY True H1975_Epitope_Rep3 1337.60742201417 1337.60632993586 68.276 2 -1.04941460934731 0.32113954865451677 1.0 ['ENST00000484159.5_1_9:6434093-6493966:+|nuORF'] 42921 10049 IFWKEPPLP True PC9_epitope_Rep4 1125.62226714933 1125.62062490379 46.319 3 -1.0494183532928627 0.32113954865451677 1.0 ['KCNH5|p.T621Pfs*13|1|0.17|ENSG00000140015|chr14:62779886-62779886|T/-|frameshift_variant'] 71740 20592 MMKNQRVQL True NCI_RA007_Epitope_Rep3 1146.6001688891 1146.5985149037901 89.693 3 -1.0494195542249425 0.3211442556943037 1.0 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A', 'ENSG00000226650|ENST00000435029|KIF4B'] 83508 15039 QDIVFHKKI True H1975_Epitope_Rep1 1126.6498788795 1126.6487899358601 63.095 2 -1.0494632073588055 0.3211442556943037 1.0 ['DRD5|p.E405K|1|0.42|ENSG00000169676|chr4:9783242-9783242|G/A|missense_variant'] 39738 15868 HPWQVRHSRHK True NCI_RA007_Epitope_Rep2 1466.7755819415 1466.7744899358602 66.44 2 -1.0496246861770304 0.32121897944682754 1.0 ['ENST00000360862.9_2_16:3534932-3535735:+|nuORF'] 77775 13449 PACAFLPV True PC9_epitope_Rep5 816.4203965386399 816.41928993586 56.747 2 -1.0496594233426033 0.32123684210526315 1.0 ['ENST00000511393.4_1_4:186317978-186320928:+|nuORF'] 68578 11949 LTYESISSTAI True PC9_epitope_Rep2 1183.59723416995 1183.59559490379 51.284 3 -1.0496652334259462 0.32123684210526315 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 100782 21055 SLRREDRLLQR True PC9_epitope_Rep6 1440.82734273084 1440.82570490379 93.81 3 -1.0497505111257666 0.321272088525151 1.0 ['ENSG00000255690|ENST00000539664|TRIL'] 126986 23122 VPWGIVKYLY True PC9_epitope_Rep2 1236.69068106232 1236.68958993586 94.43 2 -1.049790434596315 0.3212810189205547 1.0 ['ENSG00000112164|ENST00000373256|GLP1R'] 52860 5374 KRCYWSYFVRS True NCI_RA007_Epitope_Rep1 1493.72378917909 1493.72215490379 24.983 3 -1.0498129052741636 0.32129042444017575 1.0 ['ENST00000369707.2_1_10:106037758-106039140:+|nuORF'] 13614 19434 DPSSEETC True NCI_RA007_Epitope_Rep4 866.29637779398 866.29528993586 84.019 2 -1.0498421258373698 0.32129042444017575 1.0 ['PSORS1C1|p.R37C|1|0.38|ENSG00000204540|chr6:31138721-31138721|C/T|missense_variant'] 45517 10114 ISFARCFTQC True H1975_Epitope_Rep1 1174.5263352425 1174.5252299358601 43.84 2 -1.0498451068777406 0.32129042444017575 1.0 ['OR5M11|p.G95R|1|0.16|ENSG00000255223|chr11:56542975-56542975|C/G|missense_variant'] 22733 5512 ETYWYLWRFTH True NCI_RA007_Epitope_Rep2 1600.7462984454799 1600.74409987172 26.055 4 -1.0498567311875786 0.32129042444017575 1.0 ['REL-MAN1A2|1|fusion', 'ENSG00000198162|ENST00000356554|MAN1A2'] 66528 6355 LSSFQGAK True NCI_RA007_Epitope_Rep5 836.4392174069199 836.43812993586 31.12 2 -1.0498628802103538 0.3213125106898049 1.0 ['ENSG00000198108|ENST00000305031|CHSY3'] 20985 20824 ERAGGRHG True PC9_epitope_Rep6 838.4157966237399 838.41468993586 92.872 2 -1.0499073129920347 0.3213477528681191 1.0 ['ENST00000300249.9_1_18:32621372-32650196:+|nuORF'] 16166 12490 EEERVAAVTL True PC9_epitope_Rep5 1115.5822528121498 1115.5811499358601 53.042 2 -1.0499131740797394 0.3213566814456183 1.0 ['ENSG00000114124|ENST00000682958|GRK7'] 80103 19942 PKGSSKVKRRV True NCI_RA007_Epitope_Rep2 1240.77278797684 1240.7716899358602 82.571 2 -1.0499185672417521 0.3213919221155111 1.0 ['nc|ENSG00000184792|Q969R2-5|OSBP2', 'nc|ENSG00000184792|Q969R2-4|OSBP2', 'nc|ENSG00000184792|Q969R2-6|OSBP2', 'nc|ENSG00000184792|Q969R2-3|OSBP2', 'nc|ENSG00000184792|Q969R2-2|OSBP2', 'ENSG00000184792|ENST00000332585|OSBP2'] 99278 12249 SLDERIYV True PC9_epitope_Rep4 993.5131106231698 993.51200993586 54.932 2 -1.049957068141313 0.32140977740356785 1.0 ['ENSG00000170860|ENST00000306024|LSM3'] 27074 10572 FLPLNTPV True NCI_RA007_Epitope_Rep1 899.51165407119 899.51054993586 45.106 2 -1.0500213616959895 0.32140977740356785 1.0 ['nc|ENSG00000060709|O15034-3|RIMBP2', 'nc|ENSG00000060709|O15034|RIMBP2', 'ENSG00000060709|ENST00000690449|RIMBP2'] 126779 10396 VPSLVPRP True PC9_epitope_Rep1 863.52288746123 863.5217899358599 44.872 2 -1.050063252336963 0.3214365585739657 1.0 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ', 'ENST00000600632.1_1_19:15534992-15535583:-|nuORF'] 44477 7958 INSAAAQM True PC9_epitope_Rep5 804.37998827864 804.37888993586 35.55 2 -1.0500863049840923 0.3214365585739657 1.0 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1'] 127890 19504 VRPGHGKG True PC9_epitope_Rep6 806.4511195033 806.45002993586 87.683 2 -1.0501006765107768 0.3214365585739657 1.0 ['ENST00000566844.1_1_15:72564732-72564843:-|nuORF', 'ENST00000569795.5_1_15:72563579-72564960:-|nuORF'] 58208 10409 LESRDQAW True PC9_epitope_Rep1 1003.4723084403498 1003.47120993586 44.923 2 -1.0501413789749923 0.32144548516101873 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 903 8884 ADNAIPKSET True H1975_Epitope_Rep3 1044.50875351872 1044.5076499358602 39.173 2 -1.0502576108236257 0.32153334122630467 1.0 ['ENSG00000145309|ENST00000273936|CABS1'] 42928 11683 IFYEVWEKF True NCI_RA007_Epitope_Rep5 1259.6226610721499 1259.6210249037902 51.591 3 -1.0502766974629478 0.3215380365434957 1.0 ['nc|ENSG00000168356|Q9UI33-3|SCN11A', 'ENSG00000168356|ENST00000302328|SCN11A'] 95295 10970 SAEIIASL True PC9_epitope_Rep5 802.44363408102 802.44252993586 47.185 2 -1.0502909090634107 0.3215380365434957 1.0 ['ENST00000528727.5_1_11:99426939-100095567:+|nuORF', 'nc|ENSG00000149972|O94779-4|CNTN5', 'nc|ENSG00000149972|O94779-2|CNTN5', 'ENSG00000149972|ENST00000524871|CNTN5'] 139600 10831 YTQLVWANSFY True H1975_Epitope_Rep3 1390.6557521055797 1390.65464993586 46.74 2 -1.0503094392645544 0.32154696132596683 1.0 ['nc|ENSG00000173401|Q6UWM5-2|GLIPR1L1', 'ENSG00000173401|ENST00000378695|GLIPR1L1'] 128114 23201 VRRRRGAPGR True PC9_epitope_Rep5 1179.7173387893897 1179.71569490379 94.224 3 -1.0503537539617986 0.32154742643673623 1.0 ['ENST00000306353.7_2_2:85828206-85829758:-|nuORF', 'ENST00000444380.5_1_2:85828554-85829758:-|nuORF'] 680 5871 AAVDAGMAM-[Oxidation] True NCI_RA007_Epitope_Rep4 851.35172530591 851.3511749679301 29.203 1 -1.050370759018158 0.32154742643673623 1.0 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 117870 7156 VAPLVMLLHTT True H1975_Epitope_Rep3 1193.6842157828899 1193.68310993586 32.498 2 -1.0503734858631275 0.32154742643673623 1.0 ['ENSG00000164180|ENST00000296595|TMEM161B', 'ENST00000510089.5_1_5:87492030-87493588:-|nuORF'] 23941 5883 EYNPQHSLLAQ True H1975_Epitope_Rep2 1298.62551460646 1298.62440993586 27.614 2 -1.0504144861638527 0.3215521210128247 1.0 ['nc|ENSG00000170365|Q15797-2|SMAD1', 'ENSG00000170365|ENST00000302085|SMAD1'] 57635 9605 LELSWFPDT True H1975_Epitope_Rep1 1106.52842633414 1106.52732993586 41.871 2 -1.050441619213123 0.3215521210128247 1.0 ['ENSG00000139218|ENST00000369367|SCAF11'] 23429 10300 EVVSIEGIHP True H1975_Epitope_Rep3 1078.56587447202 1078.56476993586 44.672 2 -1.0504796348272338 0.32157419830058137 1.0 ['KEAP1|p.N469Kfs*11|1|0.54|ENSG00000079999|chr19:10489772-10489773|-/T|frameshift_variant', 'KEAP1|p.R596Efs*2|1|0.17|ENSG00000079999|chr19:10486741-10486741|G/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.C319Afs*9|1|0.35|ENSG00000079999|chr19:10491948-10491948|G/-|frameshift_variant'] 19178 5383 ELKGLKPG True NCI_RA007_Epitope_Rep5 840.5069030439199 840.50580993586 27.394 2 -1.050504427409222 0.3215831217856814 1.0 ['ENSG00000177363|ENST00000317449|LRRN4CL'] 12334 11996 DIVHAVGERVH True PC9_epitope_Rep1 1230.64691875738 1230.64528490379 51.005 3 -1.0505155025640998 0.32158781517578816 1.0 ['ENSG00000197077|ENST00000358431|KIAA1671'] 64286 16505 LQLRWQEYREL True NCI_RA007_Epitope_Rep2 1532.8099613312 1532.80886993586 68.93 2 -1.0505360484719322 0.32158781517578816 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 21681 8139 ERWIKFRFQTM True NCI_RA007_Epitope_Rep2 1540.7972884725198 1540.79563490379 36.293 3 -1.0505599357827273 0.32159673812968564 1.0 ['ENSG00000196440|ENST00000423738|ARMCX4'] 103080 16270 SQLIVHKGVHT True H1975_Epitope_Rep3 1217.6880552933699 1217.6869499358602 68.044 2 -1.0506548541060827 0.32166719276094274 1.0 ['ENSG00000090612|ENST00000536435|ZNF268', 'nc|ENSG00000090612|Q14587-2|ZNF268', 'ENST00000536899.6_1_12:133758152-133781113:+|nuORF'] 92785 22648 RRKRRHHKSP True PC9_epitope_Rep2 1356.80755077612 1356.8064499358602 92.611 2 -1.0506721122932043 0.32166719276094274 1.0 ['nc|ENSG00000145888|P23415|GLRA1'] 116772 19532 TYLFVQLCKV True PC9_epitope_Rep4 1212.65766668188 1212.65656993586 83.251 2 -1.0507087693550576 0.3216761143187826 1.0 ['ENST00000596232.1_1_19:36036641-36037015:+|nuORF'] 20842 5300 EQQDNPHF True H1975_Epitope_Rep1 1013.4202728674899 1013.4191699358599 25.447 2 -1.0507460709170775 0.32168503564194967 1.0 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 3102 9436 AGAPSPWPWE True NCI_RA007_Epitope_Rep1 1096.4977949122 1096.49668993586 40.697 2 -1.0508422270679898 0.32173341224436114 1.0 ['ENST00000486499.1_1_16:31096429-31097399:-|nuORF', 'ENST00000533518.5_3_16:31095113-31102425:-|nuORF', 'ENSG00000151006|ENST00000280606|PRSS53'] 111811 10439 TLRFPQATP True H1975_Epitope_Rep3 1029.56072952193 1029.5596299358601 45.214 2 -1.0509250920561273 0.3217953944686279 1.0 ['ENST00000529012.1_1_11:111795026-111796920:+|nuORF', 'ENSG00000149300|ENST00000278601|C11orf52', 'ENST00000527286.5_1_11:111789765-111796920:+|nuORF'] 359 15929 AALAALALA True NCI_RA007_Epitope_Rep2 783.48543932335 783.48434993586 66.679 2 -1.0509592789660878 0.3217953944686279 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 137238 20954 YLEVLFRIV True PC9_epitope_Rep1 1150.67503099818 1150.67392993586 85.423 2 -1.0509664788600086 0.3217953944686279 1.0 ['XRN1|p.I75V|1|0.24|ENSG00000114127|chr3:142432746-142432746|T/C|missense_variant'] 134296 17855 WRSTTGWWTS True NCI_RA007_Epitope_Rep5 1266.5781704912197 1266.57652490379 75.477 3 -1.050984333053574 0.3217953944686279 1.0 ['ENST00000556434.5_1_14:50394420-50412914:-|nuORF'] 10942 10044 DAWAEPHLE True H1975_Epitope_Rep2 1066.47197408718 1066.47086993586 43.627 2 -1.0510063054631298 0.3218043135192004 1.0 ['ENSG00000050767|ENST00000390654|COL23A1'] 114956 24821 TTICLKWKNIE True H1975_Epitope_Rep2 1347.7220578435897 1347.72040490379 102.04 3 -1.0510220759849853 0.3218132323351876 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC', 'PTPRC|p.L654Wfs*16|1|0.17|ENSG00000081237|chr1:198731707-198731707|T/-|frameshift_variant', 'PTPRC|p.L652Ffs*18|1|0.26|ENSG00000081237|chr1:198731706-198731706|C/-|frameshift_variant'] 26201 6554 FHTIIEFPLER True PC9_epitope_Rep4 1400.7452358163198 1400.7436049037901 32.35 3 -1.0510307036416742 0.3218268370943138 1.0 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32', 'ENST00000534357.1_1_11:128850446-128851410:-|nuORF'] 114643 22449 TSPPQPAARP True PC9_epitope_Rep6 1020.5352430500799 1020.53414993586 99.346 2 -1.0510410484518755 0.3218268370943138 1.0 ['CON__Q58D62'] 135887 19767 YESGFDTA True PC9_epitope_Rep6 888.350127619 888.34902993586 88.692 2 -1.0510448529086671 0.3218268370943138 1.0 ['ENSG00000171489|ENST00000376940|SPACA5', 'ENSG00000171478|ENST00000304270|SPACA5B'] 59711 7444 LGTVHIRTA True NCI_RA007_Epitope_Rep2 966.5610638751 966.55996993586 33.581 2 -1.0510742435140255 0.3218446729611025 1.0 ['ENST00000300006.8_2_16:15681261-15681480:+|nuORF'] 19095 11142 ELHRDACL True H1975_Epitope_Rep2 955.4545502012298 955.45344993586 47.894 2 -1.0510862483527212 0.3218446729611025 1.0 ['ENST00000464690.5_1_3:120129559-120169830:-|nuORF', 'nc|ENSG00000163430|Q12841-2|FSTL1', 'ENSG00000163430|ENST00000295633|FSTL1'] 125381 9471 VLSVHYERFFP True H1975_Epitope_Rep3 1392.7190210684798 1392.7179299358602 41.434 2 -1.0511639565194817 0.32187565747948665 1.0 ['ENST00000374994.8_2_9:101911626-101911818:+|nuORF'] 47136 14065 IWETFRRWHRK True NCI_RA007_Epitope_Rep2 1613.86914797317 1613.8680499358602 59.369 2 -1.051168511512242 0.32187565747948665 1.0 ['ENST00000416673.6_1_2:114369763-114384446:-|nuORF'] 3831 10971 AGYELPGIRGP True NCI_RA007_Epitope_Rep1 1128.5927579261997 1128.5916699358602 46.668 2 -1.0511949335014297 0.3218977238359479 1.0 ['nc|ENSG00000124508|Q8WVV5-3|BTN2A2'] 13496 7053 DPENEAHRKQV True H1975_Epitope_Rep3 1321.63747627249 1321.63636993586 32.094 2 -1.051337274330907 0.3220118343195266 1.0 ['ENST00000403721.5_1_2:55494731-55496348:-|nuORF'] 65235 7780 LSEELAIQLD True PC9_epitope_Rep2 1129.5866694862498 1129.5855699358601 35.298 2 -1.0513861262488184 0.322060196447121 1.0 ['nc|ENSG00000144674|Q13439-3|GOLGA4', 'nc|ENSG00000144674|Q13439-4|GOLGA4', 'ENSG00000144674|ENST00000361924|GOLGA4', 'nc|ENSG00000144674|Q13439-5|GOLGA4', 'GOLGA4|p.I1738Lfs*3|1|0.18|ENSG00000144674|chr3:37327095-37327114|AAAATCAGTGTTTTACAAAG/-|frameshift_variant'] 48442 7564 KEEEKKEEME True H1975_Epitope_Rep1 1307.59149716651 1307.59038993586 34.087 2 -1.0514279415799404 0.322069110608531 1.0 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'ENST00000480137.1_1_7:128450376-128461960:+|nuORF'] 66667 7780 LSSTEIRRHS True NCI_RA007_Epitope_Rep1 1184.6261833127999 1184.6250899358602 34.253 2 -1.051453480538498 0.32207802453552126 1.0 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'WHSC1L1-DDHD2|2|fusion', 'nc|ENSG00000147548|Q9BZ95-2|NSD3', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion', 'WHSC1L1-C15orf55|1|fusion', 'WHSC1L1-DDHD2|1|fusion'] 121440 19469 VGIHLLKVLGP True PC9_epitope_Rep5 1144.73321458064 1144.73155490379 79.94 3 -1.051462844959201 0.3220869382281011 1.0 ['ENST00000573175.1_1_17:4451225-4453465:-|nuORF'] 1304 9360 AEDVQDDEVR True H1975_Epitope_Rep3 1174.5102100707 1174.5091099358601 41.003 2 -1.0514767327776449 0.322087381832047 1.0 ['ENST00000456608.1_1_13:20137731-20137932:-|nuORF'] 42463 16819 IEQQIGKVNG True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 69.52 2 -1.0514821447265728 0.322087381832047 1.0 ['nc|ENSG00000165240|Q04656-5|ATP7A', 'ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'nc|ENSG00000165240|Q04656-6|ATP7A', 'nc|ENSG00000165240|Q04656-4|ATP7A'] 28256 3855 FRTHFGGG True PC9_epitope_Rep3 877.4194850218497 877.41838993586 19.928 2 -1.0514846924265666 0.322087381832047 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 78146 5182 PAPLRAAPA True PC9_epitope_Rep6 862.5024863698198 862.50138993586 27.68 2 -1.051523159477823 0.32209206011122943 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 129975 7111 VTPAPEPA True PC9_epitope_Rep3 780.40176926904 780.40066993586 32.36 2 -1.0515790230622732 0.32209206011122943 1.0 ['ENSG00000169221|ENST00000409939|TBC1D10B'] 124947 12565 VLMAQKEGKR True NCI_RA007_Epitope_Rep5 1158.65431263694 1158.65320993586 54.985 2 -1.051657294179926 0.32210565065341434 1.0 ['ZNF160|p.V321Sfs*36|1|0.4|ENSG00000170949|chr19:53069573-53069573|C/-|frameshift_variant', 'ZNF160|p.A769Pfs*4|1|0.29|ENSG00000170949|chr19:53068233-53068233|C/-|frameshift_variant', 'ENSG00000170949|ENST00000683776|ZNF160'] 20051 13209 ENDMFFNVI True PC9_epitope_Rep4 1127.49574630687 1127.49464993586 58.706 2 -1.0516648086124458 0.32210565065341434 1.0 ['ENSG00000102595|ENST00000376747|UGGT2', 'ENST00000463054.1_1_13:96529939-96547453:-|nuORF'] 134579 10638 WVVFWEHRLLP True PC9_epitope_Rep1 1480.7979400955198 1480.79629490379 45.811 3 -1.051672823262578 0.32210565065341434 1.0 ['ENST00000468164.1_1_9:97818730-97844994:+|nuORF'] 864 7786 ADIWTLERTHR True NCI_RA007_Epitope_Rep2 1396.7211463268 1396.72004993586 34.914 2 -1.0517460044739029 0.322136621792175 1.0 ['nc|ENSG00000177669|Q96T53-2|MBOAT4', 'ENSG00000177669|ENST00000320542|MBOAT4'] 98895 3442 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 19.311 2 -1.051795411238629 0.322136621792175 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 18214 13275 EIRNAFDL True PC9_epitope_Rep3 976.4977949121999 976.49668993586 56.097 2 -1.0518234948449705 0.32214129834617306 1.0 ['MPHOSPH8|p.E499Lfs*9|1|0.24|ENSG00000196199|chr13:19650177-19650187|ACGAAACGGAT/-|frameshift_variant', 'MPHOSPH8|p.P750Qfs*58|1|0.38|ENSG00000196199|chr13:19668445-19668445|T/-|frameshift_variant', 'ENSG00000196199|ENST00000361479|MPHOSPH8', 'nc|ENSG00000196199|Q99549-2|MPHOSPH8'] 90648 14646 RKKQRRLPR True H1975_Epitope_Rep2 1236.8003401373599 1236.7987049037902 61.495 3 -1.0518364761125427 0.32214129834617306 1.0 ['ENSG00000188993|ENST00000682860|LRRC66'] 63206 4286 LNVRLDYR True NCI_RA007_Epitope_Rep4 1047.58252759567 1047.5814299358601 22.821 2 -1.0518581321731046 0.32215020968356844 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENSG00000096433|ENST00000605930|ITPR3'] 134171 25382 WRKVLLKG True PC9_epitope_Rep3 998.6389202729798 998.6378299358599 103.05 2 -1.051884608230616 0.3221985591838881 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 20335 17601 EPGADAPLEL True PC9_epitope_Rep3 1010.49204082542 1010.49094993586 72.889 2 -1.051975118358848 0.3222074695342387 1.0 ['ENST00000600274.5_1_19:42396347-42410935:+|nuORF', 'nc|ENSG00000076928|Q92888-2|ARHGEF1', 'ENSG00000076928|ENST00000354532|ARHGEF1', 'nc|ENSG00000076928|Q92888-3|ARHGEF1', 'nc|ENSG00000076928|Q92888-4|ARHGEF1'] 25160 23530 FDRLIRRSKLW True PC9_epitope_Rep5 1488.8677509908398 1488.86664993586 95.493 2 -1.05201795210319 0.3222558170106481 1.0 ['ENSG00000273604|ENST00000621654|EPOP'] 96278 12974 SEESHEQF True PC9_epitope_Rep4 991.38830403287 991.38720993586 57.799 2 -1.052093184430859 0.322304163215943 1.0 ['ENSG00000185359|ENST00000329138|HGS', 'nc|ENSG00000185359|O14964-2|HGS', 'ENST00000571885.1_1_17:79662737-79663393:+|nuORF'] 48113 26583 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 109.47 3 -1.0521957284647836 0.3223177432499934 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 71189 22674 MFKLILPV True PC9_epitope_Rep5 959.5877962169099 959.58668993586 92.218 2 -1.0522193075345712 0.3223177432499934 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 138513 12518 YRKMKERL True PC9_epitope_Rep1 1122.6331832695398 1122.6315449037902 53.021 3 -1.0522218299969528 0.3223177432499934 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 79253 5996 PGGPRPAAPGP True PC9_epitope_Rep5 972.5141136826797 972.5130099358599 28.06 2 -1.0522582444941526 0.32235294117647056 1.0 ['ENST00000589530.5_1_18:61022616-61034411:-|nuORF', 'ENST00000590056.1_1_18:61033898-61034411:-|nuORF', 'ENST00000587292.1_1_18:61033532-61034411:-|nuORF'] 129609 19433 VTGSWMRGP True PC9_epitope_Rep1 989.4752856458099 989.47418993586 79.562 2 -1.0523094023080526 0.32238390052183974 1.0 ['ENST00000397389.6_1_12:123463939-123464260:+|nuORF'] 75252 6837 NPLKLESTG True PC9_epitope_Rep2 957.51311062317 957.51200993586 31.703 2 -1.0523301774131608 0.32238390052183974 1.0 ['ENSG00000005436|ENST00000321027|GCFC2', 'nc|ENSG00000005436|P16383-2|GCFC2'] 28712 20332 FSVFFQKV True PC9_epitope_Rep2 1000.5382031721999 1000.53710993586 83.629 2 -1.0523596728702616 0.3224059517863246 1.0 ['ENST00000512669.1_1_4:1836565-1841051:-|nuORF', 'ENST00000505551.5_1_4:1836565-1844755:-|nuORF', 'ENST00000466175.5_1_4:1836565-1857677:-|nuORF'] 56597 11079 LDWTELKRPNE True H1975_Epitope_Rep3 1399.7095785835897 1399.7084899358601 47.709 2 -1.0524392392854018 0.32245005257623555 1.0 ['ENST00000422642.6_2_10:30987145-31001569:+|nuORF'] 101050 9723 SLTNLALSRRS True H1975_Epitope_Rep3 1216.6887835693599 1216.6876899358601 42.42 2 -1.0524432925003844 0.32245005257623555 1.0 ['nc|ENSG00000206120|Q0D2K5|EGFEM1P'] 63940 13962 LPWYSKYFPYL True NCI_RA007_Epitope_Rep1 1475.74892421443 1475.7478299358602 58.333 2 -1.0524802741565105 0.32245048171076324 1.0 ['ENSG00000171492|ENST00000337338|LRRC8D'] 109422 5612 TGRFEEDFIEK True H1975_Epitope_Rep2 1369.6513950011297 1369.6497449037902 26.588 3 -1.052481626232576 0.32245048171076324 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 9853 17455 AYLPMLEKCW True H1975_Epitope_Rep1 1252.5984375536 1252.59787496793 72.626 1 -1.0525130071563475 0.32245048171076324 1.0 ['ENSG00000134107|ENST00000256495|BHLHE40'] 77685 5337 PAAANVRK True PC9_epitope_Rep3 825.48208527841 825.48098993586 25.606 2 -1.0526563200162404 0.3225119604647495 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ATXN2|p.A578Qfs*70|1|0.18|ENSG00000204842|chr12:111516277-111516277|C/-|frameshift_variant', 'ENST00000549455.1_1_12:111963110-112036838:-|nuORF'] 112314 8566 TMEKFLDPSR True H1975_Epitope_Rep2 1222.6016083577397 1222.6005099358601 37.902 2 -1.0527443101861251 0.32254715121245975 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.Q2344Kfs*48|2|0.43|ENSG00000091656|chr8:76853949-76853949|C/-|frameshift_variant', 'ZFHX4|p.P2910Qfs*27|1|0.24|ENSG00000091656|chr8:76855647-76855647|C/-|frameshift_variant', 'ZFHX4|p.A2982Qfs*10|1|0.33|ENSG00000091656|chr8:76855863-76855863|G/-|frameshift_variant', 'ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3'] 93147 20119 RRRRLWLKE True H1975_Epitope_Rep3 1311.8000057841898 1311.79837490379 84.179 3 -1.0528226356017014 0.3226043870832074 1.0 ['ENST00000606621.1_1_6:85472779-85472989:-|nuORF'] 122950 7040 VGWAGLQP True NCI_RA007_Epitope_Rep5 826.4337381036598 826.43264993586 33.758 2 -1.0528262908008033 0.3226043870832074 1.0 ['SVA_F_dup842|chr17:42972299-42974012:+|2.756514949480428|0.1714938602276479|4.01|487.0|34|3|sense'] 43237 5160 IHAFDLNSD True NCI_RA007_Epitope_Rep2 1030.47197408718 1030.47086993586 24.69 2 -1.052861595730812 0.32262643255178214 1.0 ['ENSG00000125124|ENST00000245157|BBS2', 'ENST00000561951.5_1_16:56535647-56545169:-|nuORF', 'ENST00000565781.5_1_16:56536573-56553907:-|nuORF', 'ENST00000569342.5_1_16:56536573-56553774:-|nuORF'] 17026 13109 EGLSYYKP True NCI_RA007_Epitope_Rep4 955.4650978015899 955.46400993586 57.523 2 -1.0528961187523407 0.3226442370876593 1.0 ['ENSG00000095319|ENST00000372577|NUP188', 'nc|ENSG00000095319|Q5SRE5-2|NUP188'] 58002 17614 LERADEICI True PC9_epitope_Rep3 1060.52229540788 1060.52118993586 72.939 2 -1.0528962446425452 0.3226442370876593 1.0 ['ENSG00000103479|ENST00000262133|RBL2', 'nc|ENSG00000103479|Q08999-2|RBL2', 'ENST00000562837.1_1_16:53500972-53504120:+|nuORF'] 65290 7096 LSEKMFHTLD True PC9_epitope_Rep3 1219.59070932087 1219.58905490379 32.303 3 -1.0529451717591665 0.3226794233220749 1.0 ['ENST00000584809.1_1_17:45909557-45911959:+|nuORF', 'ENSG00000141294|ENST00000269025|LRRC46'] 91407 20742 RNGRDQAV True PC9_epitope_Rep4 914.4682261194198 914.46712993586 87.948 2 -1.0529602493759638 0.32268832465962255 1.0 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1'] 88743 18255 RDEKESNLRLK True NCI_RA007_Epitope_Rep2 1386.75792575834 1386.7568299358602 75.764 2 -1.053025663381194 0.32272350938982564 1.0 ['ENSG00000243710|ENST00000372492|CFAP57'] 134235 4159 WRRRLLPWDNM True NCI_RA007_Epitope_Rep2 1541.8037708352897 1541.80213490379 20.817 3 -1.0531068634938627 0.3227896341463415 1.0 ['ENST00000549685.5_1_12:69753653-69755108:+|nuORF', 'ENST00000552949.1_1_12:69753653-69756720:+|nuORF'] 14208 16979 DSTVLCPLRGR True H1975_Epitope_Rep1 1215.6393908487898 1215.63828993586 70.733 2 -1.053116482414602 0.3227896341463415 1.0 ['ENST00000560365.5_1_14:24631516-24632718:+|nuORF', 'ENST00000559284.5_1_14:24631519-24633284:+|nuORF'] 120547 15097 VGAAMPAG True H1975_Epitope_Rep1 672.3264961537999 672.32594496793 63.325 1 -1.0531442951189285 0.3227896341463415 1.0 ['ENST00000593870.5_1_19:17862334-17865238:+|nuORF', 'ENST00000600209.5_1_19:17858565-17865238:+|nuORF'] 24792 8572 FCERGCEP True PC9_epitope_Rep1 939.3578729350698 939.35676993586 37.809 2 -1.0531922625110723 0.32279004980354536 1.0 ['ENSG00000162591|ENST00000356575|MEGF6'] 93236 20225 RRRRRRRWRW True NCI_RA007_Epitope_Rep2 1638.9780787722198 1638.97642490379 83.702 3 -1.0531931270184278 0.32279004980354536 1.0 ['SLC4A2|p.Q100Rfs*145|1|0.3|ENSG00000164889|chr7:151064603-151064603|C/-|frameshift_variant'] 39094 7837 HLARHGGP True PC9_epitope_Rep1 843.4463684760299 843.44526993586 34.971 2 -1.0531988469280746 0.32279004980354536 1.0 ['ENST00000562866.1_1_16:89783858-89784437:+|nuORF'] 93181 20844 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 86.308 2 -1.0532174373336785 0.32279894875164256 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 129719 23690 VTKARLTDK True PC9_epitope_Rep1 1030.61349337078 1030.6123899358602 95.917 2 -1.0532481501453488 0.32280360568710414 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 61366 17415 LLEHNPNLL True PC9_epitope_Rep1 1061.58694426977 1061.58584993586 71.784 2 -1.0532515876979847 0.32280360568710414 1.0 ['ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10'] 117086 11949 TYRERLYRVYK True NCI_RA007_Epitope_Rep5 1545.84159581265 1545.8404899358602 52.619 2 -1.0533096167988043 0.32283878427920054 1.0 ['ENSG00000116459|ENST00000369722|ATP5PB', 'ENST00000567372.1_1_18:65945123-65945423:-|nuORF'] 82757 5718 PVQPTHDP True PC9_epitope_Rep3 889.42938099921 889.42828993586 27.067 2 -1.0533374123215655 0.3228476821192053 1.0 ['LAMP3|p.A191D|1|0.37|ENSG00000078081|chr3:183153869-183153869|G/T|missense_variant'] 37198 7780 GVVCCSSC True NCI_RA007_Epitope_Rep4 756.26046739292 756.25936993586 36.606 2 -1.0534258332223276 0.3228964103642193 1.0 ['ENST00000563829.5_1_15:75145788-75146232:-|nuORF'] 122304 21009 VGRTRFLRA True PC9_epitope_Rep6 1074.6410455312998 1074.64047496793 93.636 1 -1.053447668600472 0.3228964103642193 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 62184 23718 LLPLRVEW True PC9_epitope_Rep1 1024.6069514383598 1024.60584993586 96.025 2 -1.0534540917402637 0.3228964103642193 1.0 ['TWNK|p.G19V|1|0.38|ENSG00000107815|chr10:100988266-100988266|G/T|missense_variant'] 43181 9448 IGSNYPEK True H1975_Epitope_Rep1 906.4446967101799 906.44358993586 41.257 2 -1.0534661580298863 0.3228964103642193 1.0 ['ENSG00000122257|ENST00000319715|RBBP6', 'nc|ENSG00000122257|Q7Z6E9-2|RBBP6'] 99878 10495 SLHLFGRK True H1975_Epitope_Rep3 956.5555845718399 956.55448993586 45.432 2 -1.0534937938242792 0.32290996045249704 1.0 ['ENST00000369258.8_1_1:146724383-146726565:+|nuORF'] 81263 21487 PPPNWRRPVYE True H1975_Epitope_Rep1 1409.72041805081 1409.71932993586 89.293 2 -1.053496428371863 0.32290996045249704 1.0 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 22016 8499 ESPWKPPTYLF True H1975_Epitope_Rep1 1363.68123857743 1363.68014993586 37.621 2 -1.0534982580967374 0.32290996045249704 1.0 ['ENSG00000170852|ENST00000304056|KBTBD2'] 64925 17500 LSCHCHSC True PC9_epitope_Rep2 888.3040635404002 888.30296993586 72.57 2 -1.0535578421910623 0.32293199495480346 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 122183 5130 VGRKTTSN True PC9_epitope_Rep3 861.46682913709 861.4657299358599 24.818 2 -1.053638822911943 0.32294978584754447 1.0 ['nc|ENSG00000163803|Q6P1J6-3|PLB1', 'ENSG00000163803|ENST00000327757|PLB1', 'nc|ENSG00000163803|Q6P1J6-5|PLB1'] 118339 27024 VDFLLLRVHIL True PC9_epitope_Rep1 1336.8230922142 1336.82198993586 110.16 2 -1.0536426993305614 0.32294978584754447 1.0 ['ENST00000409785.8_1_2:85273293-85273398:+|nuORF'] 94246 20480 RWRLPLTCLLL True NCI_RA007_Epitope_Rep5 1382.82204666838 1382.8204049037902 85.722 3 -1.0537860566980952 0.3230637850620771 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 85608 18474 QLNFIENPV True PC9_epitope_Rep4 1072.55530978832 1072.5542099358602 79.131 2 -1.0538179948615793 0.3230730829359293 1.0 ['ITGB6-RBMS1|1|fusion', 'ITGB6-RBMS1|7|fusion', 'nc|ENSG00000115221|P18564-2|ITGB6', 'ENSG00000115221|ENST00000283249|ITGB6', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion'] 125923 13300 VNYGCSLK True NCI_RA007_Epitope_Rep1 882.42693847106 882.4263849679301 55.736 1 -1.0538273909305458 0.3230730829359293 1.0 ['ENST00000517458.1_1_8:127565648-127568649:-|nuORF'] 54613 9135 LADIVKINN True PC9_epitope_Rep5 998.5760452329 998.57494993586 40.083 2 -1.0538334490675456 0.3230730829359293 1.0 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 12789 11026 DLIGCQRL True PC9_epitope_Rep6 916.4800366730799 916.47892993586 53.315 2 -1.0538335812861883 0.3230730829359293 1.0 ['ENSG00000112739|ENST00000337659|PRPF4B', 'ENST00000463634.6_1_6:4056876-4060847:+|nuORF'] 28567 11189 FSMKLMGSL True PC9_epitope_Rep3 1012.5085599200399 1012.50746993586 48.044 2 -1.0538743864935158 0.3230777315064174 1.0 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF'] 120495 7052 VFVVLLLC True H1975_Epitope_Rep3 904.5455970517598 904.54448993586 32.09 2 -1.0538786400644102 0.3230777315064174 1.0 ['nc|ENSG00000185825|P51572-2|BCAP31', 'ENSG00000185825|ENST00000345046|BCAP31'] 131726 18220 VWVWVCLRRRL True NCI_RA007_Epitope_Rep3 1484.8550781321599 1484.85343490379 79.784 3 -1.0539110329993182 0.32308237983263927 1.0 ['ENST00000478137.1_1_7:1199695-1199887:-|nuORF'] 74358 10070 NISCKASQDI True PC9_epitope_Rep6 1077.5124590001699 1077.51136993586 49.328 2 -1.0539164014015243 0.32308237983263927 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 119318 8662 VELRRPDQRR True H1975_Epitope_Rep1 1323.7483641341498 1323.74726993586 38.248 2 -1.0539681604282538 0.32308702791461413 1.0 ['ENST00000390551.6_1_14:106237055-106237666:-|nuORF'] 42781 9197 IFICSYFVYFY True NCI_RA007_Epitope_Rep1 1463.68354707655 1463.6818949037902 39.777 3 -1.0539950629613908 0.32308702791461413 1.0 ['ENST00000495933.1_1_2:46839372-46840883:-|nuORF'] 93177 20500 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 84.935 2 -1.0540211143886877 0.32308743169398907 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 31045 8761 GAVQQYIRTI True NCI_RA007_Epitope_Rep4 1147.6349570913499 1147.63386993586 40.497 2 -1.0540588832737887 0.32308743169398907 1.0 ['ENSG00000160695|ENST00000621676|VPS11', 'nc|ENSG00000160695|Q9H270|VPS11'] 128557 8156 VSHYRLFP True NCI_RA007_Epitope_Rep3 1017.5396001545299 1017.53850993586 39.195 2 -1.0540731866318975 0.32308743169398907 1.0 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT'] 804 7716 ACVVRCDP True H1975_Epitope_Rep3 861.3836937600898 861.38258993586 34.663 2 -1.0540875998007548 0.323109458944686 1.0 ['ENSG00000174628|ENST00000695302|IQCK', 'ENST00000568300.6_1_16:19775348-19867867:+|nuORF'] 66935 10093 LSYKHTDSGYS True NCI_RA007_Epitope_Rep3 1256.567331024 1256.56622993586 46.791 2 -1.0541380103484153 0.32312724120266384 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'ENST00000450801.1_1_X:138811061-138819898:-|nuORF'] 30577 16874 GAKKKKKKKK True PC9_epitope_Rep2 1170.8288463009796 1170.82720490379 70.153 3 -1.0541398837505416 0.32312724120266384 1.0 ['ENST00000406961.5_1_2:24991338-24991476:+|nuORF'] 93703 24263 RTLRIVREHY True PC9_epitope_Rep4 1341.7629515691299 1341.76129490379 101.81 3 -1.0541804806503945 0.3231628029158731 1.0 ['ENSG00000166938|ENST00000319212|DIS3L', 'DIS3L|p.K695Rfs*37|1|0.32|ENSG00000166938|chr15:66326243-66326243|A/-|frameshift_variant', 'nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'DIS3L|p.N286Tfs*9|1|0.18|ENSG00000166938|chr15:66315076-66315076|A/-|frameshift_variant', 'ENST00000565281.5_1_15:66585934-66615040:+|nuORF'] 59244 6005 LGGLYYLDP True NCI_RA007_Epitope_Rep2 1009.5120479940099 1009.51094993586 27.967 2 -1.05418816349085 0.3231628029158731 1.0 ['PRLR|p.D610Y|1|0.29|ENSG00000113494|chr5:35065130-35065130|C/A|missense_variant'] 98221 9130 SIEEVYYLW True NCI_RA007_Epitope_Rep5 1200.5702911461199 1200.56918993586 41.769 2 -1.0542033715989454 0.3231628029158731 1.0 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK', 'TBCK|p.F654Sfs*7|1|0.1|ENSG00000145348|chr4:106193707-106193707|A/-|frameshift_variant'] 333 4359 AAILWEQNQR True PC9_epitope_Rep4 1227.63601972051 1227.6343649037901 23.21 3 -1.054219924294738 0.3231628029158731 1.0 ['ENST00000540651.5_1_1:228270396-228270462:+|nuORF'] 15674 5413 ECGKTFSSP True H1975_Epitope_Rep1 954.41168232974 954.41058993586 25.878 2 -1.0544060427317596 0.3232682760251123 1.0 ['nc|ENSG00000197857|P15621-2|ZNF44', 'ENSG00000197857|ENST00000355684|ZNF44', 'nc|ENSG00000197857|P15621-3|ZNF44', 'nc|ENSG00000197857|P15621|ZNF44'] 110093 11518 TIAERFLYRWW True H1975_Epitope_Rep3 1539.7986683715098 1539.79756993586 49.429 2 -1.0544174227686598 0.3232682760251123 1.0 ['ENSG00000148377|ENST00000277517|IDI2'] 41457 13078 IAWEPVQYFN True PC9_epitope_Rep2 1265.6080736371698 1265.60641490379 55.582 3 -1.054451366027635 0.3232682760251123 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 53184 16717 KSVLQFQNV True PC9_epitope_Rep6 1061.58694426977 1061.58584993586 76.777 2 -1.0544603781749298 0.3232686725942659 1.0 ['ENSG00000158445|ENST00000371741|KCNB1', 'KCNB1|p.I409Sfs*40|1|0.25|ENSG00000158445|chr20:49374336-49374336|G/-|frameshift_variant', 'ENSG00000182674|ENST00000523207|KCNB2'] 93476 23518 RSGLVGGGLVG True PC9_epitope_Rep5 970.5559784946598 970.55488993586 95.446 2 -1.0544744761967255 0.3232686725942659 1.0 ['ENST00000423485.5_1_17:38574066-38574135:-|nuORF'] 65486 11465 LSFLLNDPSP True NCI_RA007_Epitope_Rep1 1101.5706254992901 1101.5695299358601 48.563 2 -1.0544805926012744 0.3232686725942659 1.0 ['ENSG00000100218|ENST00000216036|RSPH14'] 110166 11675 TIDELEELYA True PC9_epitope_Rep5 1194.5655996885 1194.56395490379 49.904 3 -1.0545425913154032 0.3232775603477713 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9'] 93173 20026 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 83.009 2 -1.054584794124804 0.323286843695007 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 102744 10926 SQEEHQDFLQF True H1975_Epitope_Rep3 1406.61025846514 1406.60916993586 47.113 2 -1.0545870295582307 0.323286843695007 1.0 ['ENSG00000172215|ENST00000304552|CXCR6'] 29167 13248 FTWNSELKRHK True NCI_RA007_Epitope_Rep1 1444.75753183552 1444.75642993586 55.532 2 -1.054597279361847 0.323286843695007 1.0 ['ENSG00000103343|ENST00000268655|ZNF174'] 125702 21152 VNDLRYYRLC True H1975_Epitope_Rep1 1313.65504091293 1313.65394993586 87.872 2 -1.0545990351461747 0.323286843695007 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 35629 13024 GTLSGWILSK True NCI_RA007_Epitope_Rep5 1060.59169529704 1060.5905899358602 56.774 2 -1.05463641160506 0.3232914850028891 1.0 ['ENSG00000127022|ENST00000247461|CANX', 'nc|ENSG00000127022|P27824-2|CANX'] 128741 18490 VSPRVGVR True H1975_Epitope_Rep3 868.5242844435598 868.52318993586 77.533 2 -1.054684851133887 0.3232914850028891 1.0 ['ENST00000531214.5_1_11:797830-797989:-|nuORF'] 31860 2740 GEQAPGAAAPP True H1975_Epitope_Rep2 964.4614094034798 964.46030993586 14.59 2 -1.054735510774154 0.32331350378862495 1.0 ['nc|ENSG00000006327|Q9NP84-2|TNFRSF12A'] 5518 16908 ANDNSLFVLYP True H1975_Epitope_Rep3 1251.6135529404298 1251.61244993586 70.595 2 -1.0547508728128352 0.323322390019698 1.0 ['PCDHB13|p.P559L|1|0.1|ENSG00000187372|chr5:141215799-141215799|C/T|missense_variant'] 125898 6003 VNTGLSLW True PC9_epitope_Rep1 888.4705175352 888.46942993586 27.906 2 -1.0547618589404624 0.32332703015022585 1.0 ['ENST00000500148.6_1_5:80597318-80597354:-|nuORF'] 81752 12357 PSDIRLAGTL True PC9_epitope_Rep1 1041.5818588893299 1041.5807699358602 52.389 2 -1.0548152614731512 0.32332703015022585 1.0 ['RABGAP1-TTLL11|1|fusion', 'RABGAP1-TTLL11|2|fusion', 'ENSG00000175764|ENST00000321582|TTLL11', 'ENST00000474723.5_1_9:124736354-124752043:-|nuORF', 'nc|ENSG00000175764|Q8NHH1-2|TTLL11'] 82447 14357 PVDHLHLPPT True PC9_epitope_Rep3 1124.5978433066398 1124.5961849037901 60.315 3 -1.0549041538082928 0.32335368656030467 1.0 ['nc|ENSG00000182158|Q70SY1-2|CREB3L2', 'ENSG00000182158|ENST00000330387|CREB3L2'] 18323 14640 EIVHFTLPD True PC9_epitope_Rep1 1069.54441075145 1069.5433099358602 61.135 2 -1.0549086376170507 0.32335368656030467 1.0 ['ENSG00000116039|ENST00000234396|ATP6V1B1'] 81986 10329 PSSEEVSFAF True NCI_RA007_Epitope_Rep3 1098.48695544498 1098.4858499358602 47.693 2 -1.0549162404676937 0.32335368656030467 1.0 ['ENSG00000068878|ENST00000404125|PSME4', 'nc|ENSG00000068878|Q14997-2|PSME4'] 73043 14502 NDKGISKVVYR True H1975_Epitope_Rep1 1277.70918466077 1277.70808993586 60.984 2 -1.0549884163976258 0.3233888334471348 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9', 'ENST00000475908.5_1_5:56205193-56212726:+|nuORF'] 136015 6011 YFMAGFAL True NCI_RA007_Epitope_Rep2 918.4309612223398 918.42986993586 27.992 2 -1.0550512651319968 0.32339771787229016 1.0 ['ENST00000478631.6_2_1:53460811-53461279:+|nuORF'] 79956 14540 PISMNHGVHF True H1975_Epitope_Rep2 1137.5389485315297 1137.53784993586 61.085 2 -1.0550822614739797 0.3234023555981565 1.0 ['DOP1A|p.S1083Vfs*21|1|0.18|ENSG00000083097|chr6:83137286-83137288|CTA/TT|frameshift_variant', 'ENSG00000083097|ENST00000349129|DOP1A'] 109185 23905 TFRRWHQKRRK True PC9_epitope_Rep5 1597.9178295010895 1597.91672993586 96.932 2 -1.0551011446723109 0.3234023555981565 1.0 ['ENST00000467796.5_1_22:51221718-51237143:+|nuORF', 'ENST00000480246.1_1_22:51222460-51237143:+|nuORF'] 13639 18171 DPVIRKLAK True PC9_epitope_Rep6 1038.6549642599398 1038.65386993586 82.536 2 -1.055118373296185 0.3234112394957983 1.0 ['nc|ENSG00000100353|O15371-2|EIF3D', 'nc|ENSG00000100353|O15371-3|EIF3D', 'ENSG00000100353|ENST00000216190|EIF3D'] 88158 16735 QWRRRPALR True NCI_RA007_Epitope_Rep4 1237.7268408439297 1237.7257499358602 72.555 2 -1.0551757688416157 0.3234463833195467 1.0 ['ENST00000240139.9_1_8:22298692-22298875:+|nuORF'] 41231 19057 IAECWRSRP True PC9_epitope_Rep1 1116.5498475683999 1116.54874993586 78.094 2 -1.0552777278130052 0.3234772789937371 1.0 ['ENST00000526097.1_1_8:11418120-11421614:+|nuORF', 'ENSG00000136573|ENST00000259089|BLK'] 60618 20143 LISRRSRHRA True NCI_RA007_Epitope_Rep1 1250.74321918406 1250.74212993586 82.561 2 -1.055285610859018 0.3234772789937371 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-2|INPP5F'] 133817 22384 WLVKRLHKL True NCI_RA007_Epitope_Rep3 1191.7604323879898 1191.75932993586 97.28 2 -1.0552972663948348 0.3234819142650824 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 36539 12950 GVKVQELWQP True PC9_epitope_Rep3 1182.6397081186196 1182.63805490379 54.836 3 -1.055320858442367 0.3234819142650824 1.0 ['ENST00000479002.1_1_2:27457475-27458610:+|nuORF'] 46489 12427 ITPELKHYF True PC9_epitope_Rep2 1146.60734536118 1146.60568490379 53.108 3 -1.0554992533426253 0.32357420439029516 1.0 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 12062 20792 DIEFMKRSHEK True H1975_Epitope_Rep1 1418.6976340008998 1418.69652993586 86.399 2 -1.0555285865999935 0.32357420439029516 1.0 ['ENST00000469999.1_1_7:152064752-152065184:+|nuORF'] 119909 13403 VEWLKFGV True PC9_epitope_Rep1 976.5382031721998 976.53710993586 56.417 2 -1.0555970239437875 0.32357420439029516 1.0 ['IGSF9B|p.F63L|1|0.25|ENSG00000080854|chr11:133946134-133946134|G/C|missense_variant'] 93927 2688 RVKVLLVLNLI True H1975_Epitope_Rep1 1278.8751277870597 1278.87402993586 13.831 2 -1.0556352395140756 0.32359621368273184 1.0 ['GALNT17|p.L576Pfs*19|1|0.28|ENSG00000185274|chr7:71712069-71712070|-/G|frameshift_variant', 'ENSG00000185274|ENST00000333538|GALNT17'] 134632 24842 WWFWLTLFF True H1975_Epitope_Rep2 1344.6695516949196 1344.66844993586 102.12 2 -1.0556600326278434 0.3236050938689773 1.0 ['XKR4|p.G146W|1|0.16|ENSG00000206579|chr8:55102924-55102924|G/T|missense_variant'] 122971 21394 VGWQHVPII True PC9_epitope_Rep4 1047.58655034695 1047.5854499358602 90.461 2 -1.0556964327609513 0.32362710217799423 1.0 ['ENSG00000139410|ENST00000403593|SDSL', 'SDSL|p.M199I|1|0.25|ENSG00000139410|chr12:113435482-113435482|G/T|missense_variant'] 63277 8428 LPAQQGLATFP True H1975_Epitope_Rep3 1141.6131590176096 1141.61206993586 37.402 2 -1.0557762720599138 0.3236622380927375 1.0 ['AHDC1|p.R883Q|1|0.38|ENSG00000126705|chr1:27549468-27549468|C/T|missense_variant'] 20800 4904 EQNQQCLREEQ True H1975_Epitope_Rep1 1403.6099411953098 1403.60884993586 23.94 2 -1.0558187235989593 0.32369737308495133 1.0 ['EVC2|p.H1088N|1|0.58|ENSG00000173040|chr4:5576250-5576250|G/T|missense_variant'] 79761 22325 PHTTSQPWAWV True NCI_RA007_Epitope_Rep5 1308.62512068364 1308.6234749037899 93.024 3 -1.0558632204721201 0.32370625147688187 1.0 ['EPHA2|p.G240Vfs*153|1|0.11|ENSG00000142627|chr1:16148482-16148482|C/-|frameshift_variant'] 116023 14510 TVREERARLPK True NCI_RA007_Epitope_Rep2 1353.78408093653 1353.78298993586 61.104 2 -1.0559041003769676 0.3237371350556606 1.0 ['ENST00000490182.1_1_2:174829263-174829605:-|nuORF'] 28149 2008 FRKLLGHHG True NCI_RA007_Epitope_Rep1 1063.60393174659 1063.6028299358602 10.559 2 -1.055932339757633 0.3237371350556606 1.0 ['ENSG00000101890|ENST00000218006|GUCY2F'] 63312 17024 LPDFQKDDFK True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 70.906 2 -1.055958066004783 0.32374601257597435 1.0 ['ENSG00000152942|ENST00000354868|RAD17', 'nc|ENSG00000152942|O75943|RAD17', 'nc|ENSG00000152942|O75943-4|RAD17'] 5081 20519 ALLQAHPFL True PC9_epitope_Rep1 1008.5756513100799 1008.57454993586 83.738 2 -1.055996399488594 0.32378152032659063 1.0 ['nc|ENSG00000164483|Q8N6K7-2|SAMD3', 'ENST00000533296.5_1_6:130497274-130536439:-|nuORF', 'ENST00000524930.1_1_6:130504375-130535627:-|nuORF', 'SAMD3|p.Q486Kfs*6|1|0.38|ENSG00000164483|chr6:130144627-130144627|G/-|frameshift_variant', 'ENSG00000164483|ENST00000439090|SAMD3', 'nc|ENSG00000164483|Q8N6K7-3|SAMD3'] 99758 15803 SLGLEQPL True PC9_epitope_Rep3 855.4701831820299 855.46908993586 65.941 2 -1.0560066122249336 0.32378152032659063 1.0 ['nc|ENSG00000144560|Q14135-5|VGLL4', 'nc|ENSG00000144560|Q14135-6|VGLL4', 'nc|ENSG00000144560|Q14135-2|VGLL4', 'nc|ENSG00000144560|Q14135|VGLL4', 'nc|ENSG00000144560|Q14135-4|VGLL4', 'ENSG00000144560|ENST00000430365|VGLL4'] 16339 15676 EEKKLTVD True NCI_RA007_Epitope_Rep5 960.5127762699999 960.51166993586 67.013 2 -1.0560116129807016 0.32378152032659063 1.0 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant', 'ASCC3|p.R1140K|1|0.11|ENSG00000112249|chr6:100647285-100647285|C/T|missense_variant'] 61897 17139 LLLIQERWKRA True PC9_epitope_Rep6 1424.86160298124 1424.8599449037902 78.51 3 -1.0560155610489945 0.32378152032659063 1.0 ['ENST00000520874.1_1_8:108995475-108995910:+|nuORF', 'nc|ENSG00000148572|Q96F24-2|NRBF2', 'nc|ENSG00000148572|Q96F24-3|NRBF2', 'ENSG00000148572|ENST00000277746|NRBF2'] 36829 9911 GVPRPVLDP True PC9_epitope_Rep6 948.5392658013599 948.53816993586 48.632 2 -1.0561275643472938 0.32386490424372893 1.0 ['ENST00000355552.7_2_3:127298967-127309369:-|nuORF', 'ENST00000469111.5_2_3:127306961-127309402:-|nuORF'] 71183 17675 MFKLILPV True H1975_Epitope_Rep1 959.5877962169099 959.58668993586 73.568 2 -1.0561330491202376 0.32386490424372893 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 139716 22098 YTVRTLLR True NCI_RA007_Epitope_Rep4 1020.6080140675199 1020.60690993586 95.834 2 -1.0562601031227818 0.3239000315026777 1.0 ['ENST00000307533.10_1_4:6676966-6677095:+|nuORF'] 119058 22668 VEGYFHQFF True PC9_epitope_Rep2 1172.52909504048 1172.5279899358602 92.688 2 -1.0563028256242066 0.32391778016958495 1.0 ['ENSG00000167346|ENST00000380390|MMP26'] 22509 4928 ETKNPSELAE True NCI_RA007_Epitope_Rep4 1116.5298828861198 1116.52878993586 25.418 2 -1.0563192935822936 0.32391778016958495 1.0 ['HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-5|HECTD4'] 111816 7945 TLRGLWTV True H1975_Epitope_Rep3 944.5443511817999 944.54324993586 35.53 2 -1.0563589171687422 0.32395290535130666 1.0 ['ENST00000272298.11_1_2:47387407-47387581:-|nuORF'] 87019 14085 QSCLAPFPEDT True PC9_epitope_Rep4 1206.5226893307 1206.5215899358602 62.087 2 -1.056389176894756 0.3239575266770794 1.0 ['ENST00000492127.5_1_2:242439390-242441021:-|nuORF'] 131124 6384 VVPAEIAKKPR True NCI_RA007_Epitope_Rep3 1206.7448418934998 1206.74320490379 32.114 3 -1.0564093738827025 0.3239575266770794 1.0 ['nc|ENSG00000189308|Q6MZP7-3|LIN54'] 133818 23409 WLVKRLHKL True NCI_RA007_Epitope_Rep5 1191.7604323879898 1191.75932993586 97.335 2 -1.0565087412141143 0.32397527267000037 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 121843 18735 VGNRQIQI True NCI_RA007_Epitope_Rep4 926.52976374682 926.5292149679301 81.054 1 -1.0565145712233421 0.32397527267000037 1.0 ['ENST00000313565.10_1_16:71898855-71918020:-|nuORF', 'ENST00000565516.5_1_16:71898855-71913932:-|nuORF', 'ENST00000563827.5_1_16:71901919-71917343:-|nuORF', 'ENST00000565601.5_2_16:71901919-71917197:-|nuORF', 'ENST00000568322.5_1_16:71901919-71918589:-|nuORF', 'ENST00000562985.5_1_16:71901919-71918510:-|nuORF', 'ENST00000568961.5_1_16:71901919-71917908:-|nuORF'] 73534 14437 NFINTNAADI True PC9_epitope_Rep2 1091.52473793603 1091.52364993586 60.8 2 -1.0565902035133237 0.324032391427034 1.0 ['ENSG00000151023|ENST00000331161|ENKUR'] 23475 13752 EVYGRTYP True PC9_epitope_Rep5 983.4712458111899 983.47014993586 57.918 2 -1.0566066241439798 0.324032391427034 1.0 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant'] 66207 17415 LSPPLGPSPGF True PC9_epitope_Rep4 1067.56514619603 1067.56404993586 74.98 2 -1.05667646496039 0.3240632587440121 1.0 ['ENST00000303562.8_1_14:75745620-75745674:+|nuORF'] 44932 8548 IQEHNEYYQYL True H1975_Epitope_Rep2 1498.6728587217 1498.67176993586 37.835 2 -1.0566868286158815 0.3240632587440121 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 75663 9691 NQTFVSKFI True NCI_RA007_Epitope_Rep4 1082.5760452329 1082.57494993586 44.126 2 -1.0567239525248704 0.3240817290657848 1.0 ['OR2D3|p.A85Cfs*8|1|0.28|ENSG00000178358|chr11:6921250-6921251|-/T|frameshift_variant', 'ENSG00000178358|ENST00000317834|OR2D3'] 63816 17604 LPSSALLEQ True PC9_epitope_Rep4 956.51786165044 956.51676993586 75.73 2 -1.0567480127970845 0.3240817290657848 1.0 ['ENST00000436679.2_1_11:73840908-73844654:-|nuORF'] 79073 16023 PFSWTVFQFRL True PC9_epitope_Rep5 1426.7397565130598 1426.73812490379 66.621 3 -1.0567562204030383 0.3240817290657848 1.0 ['ENST00000506586.1_1_5:93928514-93929327:+|nuORF'] 59848 12653 LHFEILDDDY True H1975_Epitope_Rep2 1278.57683307854 1278.5757299358602 53.767 2 -1.056769477511252 0.3240817290657848 1.0 ['ADGRV1|p.V4335F|1|0.68|ENSG00000164199|chr5:90779018-90779018|G/T|missense_variant'] 84197 5857 QETKCSENKLP True H1975_Epitope_Rep3 1275.61290131743 1275.61180993586 27.542 2 -1.0567818813887186 0.3240817290657848 1.0 ['ENST00000557159.5_1_14:20924026-20925664:+|nuORF', 'ENSG00000100823|ENST00000216714|APEX1'] 111410 11113 TLKHKINP True H1975_Epitope_Rep3 949.5709002828099 949.56980993586 47.842 2 -1.0568176656148913 0.3240817290657848 1.0 ['nc|ENSG00000105339|A2RUS2-2|DENND3', 'nc|ENSG00000105339|A2RUS2|DENND3', 'ENSG00000105339|ENST00000519811|DENND3'] 13284 4548 DLWVAVFQK True NCI_RA007_Epitope_Rep3 1104.59678067748 1104.59568993586 24.759 2 -1.0568209420352457 0.3240817290657848 1.0 ['nc|ENSG00000007255|O75865-2|TRAPPC6A', 'ENSG00000007255|ENST00000585934|TRAPPC6A', 'ENST00000587818.1_1_19:45668074-45681461:-|nuORF'] 100224 7126 SLLNLSPR True NCI_RA007_Epitope_Rep5 898.52361573722 898.52250993586 34.089 2 -1.0568828818407878 0.3240817290657848 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 99153 6993 SLAPLPLCLYR True NCI_RA007_Epitope_Rep1 1244.69511481976 1244.69400993586 31.201 2 -1.056997844139259 0.32415621227232166 1.0 ['ENST00000581223.2_17:21911572-21911938:+|nuORF'] 42836 16742 IFLIIFLWRH True NCI_RA007_Epitope_Rep4 1356.80704822724 1356.80594993586 72.58 2 -1.0570570762292322 0.3241782035299521 1.0 ['TAS2R10|p.S199F|1|0.12|ENSG00000121318|chr12:10825674-10825674|G/A|missense_variant'] 134803 4348 WYPYNYSR True NCI_RA007_Epitope_Rep5 1147.50869394907 1147.50703490379 23.335 3 -1.0571757112048563 0.3241916859122402 1.0 ['nc|ENSG00000144048|O75319-1|DUSP11', 'ENSG00000144048|ENST00000272444|DUSP11'] 113866 6712 TRENDPVL True PC9_epitope_Rep4 942.4770594676198 942.47596993586 33.004 2 -1.0571999360747222 0.3241916859122402 1.0 ['nc|ENSG00000133710|Q9NQ38-2|SPINK5', 'ENSG00000133710|ENST00000256084|SPINK5', 'nc|ENSG00000133710|Q9NQ38-3|SPINK5'] 24790 6962 FC[Carbamidomethyl]EC[Carbamidomethyl]DNFNC[Carbamidomethyl]DR True H1975_Epitope_Rep1 1535.5227839053198 1535.5216899358602 31.819 2 -1.0572532676992867 0.3241916859122402 1.0 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 79001 23135 PFLLPKSQT True H1975_Epitope_Rep1 1029.5858816406098 1029.58478993586 96.19 2 -1.057321036626987 0.32422679735989185 1.0 ['nc|ENSG00000075651|Q13393-4|PLD1', 'ENSG00000075651|ENST00000351298|PLD1', 'nc|ENSG00000075651|Q13393-2|PLD1', 'ENST00000471075.1_1_3:171371881-171395443:-|nuORF'] 80847 9829 PLVAHVAS True PC9_epitope_Rep4 792.4493881678 792.44828993586 45.455 2 -1.0573350800438386 0.3242314101638871 1.0 ['ENST00000393800.6_2_11:68382148-68382592:+|nuORF'] 70864 8964 MEGLECHVF True H1975_Epitope_Rep2 1063.44668793947 1063.4455899358602 39.434 2 -1.0573651057226952 0.3242314101638871 1.0 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant'] 41154 16484 HYRNKLRL True PC9_epitope_Rep4 1098.6410455312998 1098.6399499358602 71.376 2 -1.057384616278332 0.3242317684414937 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L'] 121764 6419 VGLYTQCMGP True NCI_RA007_Epitope_Rep4 1067.47798806775 1067.47688993586 31.291 2 -1.0573888317784554 0.3242317684414937 1.0 ['ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2', 'SLIT2|p.A421Pfs*21|1|0.12|ENSG00000145147|chr4:20523888-20523888|G/-|frameshift_variant'] 94379 5680 RYEHDRERERE True H1975_Epitope_Rep1 1573.7345645448102 1573.73290490379 26.915 3 -1.0573910025814417 0.3242317684414937 1.0 ['nc|ENSG00000123200|Q5T200-2|ZC3H13', 'nc|ENSG00000123200|Q5T200|ZC3H13', 'ENSG00000123200|ENST00000679008|ZC3H13'] 115905 9401 TVPISFAVFP True NCI_RA007_Epitope_Rep1 1076.59063266788 1076.5895299358601 40.56 2 -1.0574322591054004 0.32423638081242784 1.0 ['ENSG00000013583|ENST00000014930|HEBP1'] 111895 16009 TLRRLESRF True NCI_RA007_Epitope_Rep3 1176.6727395823998 1176.6716499358602 70.648 2 -1.0574447957731485 0.32423638081242784 1.0 ['ENSG00000119636|ENST00000394009|BBOF1', 'ENST00000489323.5_1_14:74495895-74513566:+|nuORF'] 14832 10596 DYEATRLEGLP True NCI_RA007_Epitope_Rep2 1262.6142812164198 1262.6131899358602 45.815 2 -1.057470962647066 0.3242544705527348 1.0 ['nc|ENSG00000102103|O60828-7|PQBP1', 'nc|ENSG00000102103|O60828-10|PQBP1', 'nc|ENSG00000102103|O60828-9|PQBP1', 'ENST00000486150.5_1_X:48755780-48758817:+|nuORF', 'nc|ENSG00000102103|O60828-6|PQBP1', 'ENST00000470062.5_1_X:48755362-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-5|PQBP1', 'nc|ENSG00000102103|O60828-4|PQBP1', 'ENST00000472742.5_1_X:48755271-48760011:+|nuORF', 'nc|ENSG00000102103|O60828-3|PQBP1', 'nc|ENSG00000102103|O60828-2|PQBP1', 'ENSG00000102103|ENST00000447146|PQBP1', 'nc|ENSG00000102103|O60828-8|PQBP1'] 69382 14174 LVQHVQFIF True PC9_epitope_Rep2 1129.6284151589298 1129.62676490379 59.788 3 -1.0574754923239145 0.3242544705527348 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'ENST00000462984.1_1_X:70346235-70347318:+|nuORF'] 18732 9546 ELDLGLGPR True NCI_RA007_Epitope_Rep1 968.5290950404799 968.52798993586 41.129 2 -1.057501088994618 0.3242544705527348 1.0 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 64662 25274 LRILLVLKPI True PC9_epitope_Rep3 1176.83220034592 1176.83056490379 102.62 3 -1.0575076734677424 0.3242544705527348 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 129977 19905 VTPAPHEPV True PC9_epitope_Rep5 945.49198125577 945.49088993586 81.619 2 -1.0575184159474842 0.3242544705527348 1.0 ['nc|ENSG00000102858|O60291-3|MGRN1', 'ENSG00000102858|ENST00000262370|MGRN1', 'nc|ENSG00000102858|O60291-4|MGRN1', 'nc|ENSG00000102858|O60291|MGRN1', 'MGRN1-C16orf96|1|fusion', 'MGRN1-C16orf96|2|fusion'] 131808 13084 VYAPALAL True NCI_RA007_Epitope_Rep5 816.47454028648 816.47344993586 57.005 2 -1.0575440320464722 0.3242633360447115 1.0 ['ENSG00000148942|ENST00000396005|SLC5A12', 'nc|ENSG00000148942|Q1EHB4-2|SLC5A12', 'SLC5A12|p.C266*|2|0.17|ENSG00000148942|chr11:26703554-26703554|G/-|frameshift_variant'] 46665 14447 ITVNADYVISL True PC9_epitope_Rep4 1206.6496040959798 1206.6485099358601 63.479 2 -1.0575470285939004 0.3242722013040683 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3', 'nc|ENSG00000164796|Q7Z407-5|CSMD3', 'CSMD3|p.S3015Lfs*14|2|0.38|ENSG00000164796|chr8:112289471-112289471|C/-|frameshift_variant', 'CSMD3|p.V3191Lfs*17|1|0.3|ENSG00000164796|chr8:112265528-112265528|C/-|frameshift_variant', 'CSMD3|p.H3450Qfs*4|1|0.18|ENSG00000164796|chr8:112244445-112244446|TA/-|frameshift_variant', 'CSMD3|p.N3536Kfs*11|1|0.15|ENSG00000164796|chr8:112237209-112237210|-/T|frameshift_variant', 'CSMD3|p.H2195Mfs*41|2|0.67|ENSG00000164796|chr8:112341546-112341546|G/-|frameshift_variant', 'CSMD3|p.E2409Kfs*7|1|0.45|ENSG00000164796|chr8:112319922-112319922|C/-|frameshift_variant'] 65539 9793 LSGARTFRLAP True NCI_RA007_Epitope_Rep2 1187.6774906096698 1187.67638993586 42.716 2 -1.057566952690101 0.32427255791986986 1.0 ['ENSG00000125910|ENST00000246115|S1PR4'] 122438 7338 VGSLAGIGEVM True H1975_Epitope_Rep3 1031.53213181559 1031.53102993586 33.202 2 -1.05758037363619 0.32427255791986986 1.0 ['ENST00000420029.1_1_1:174726080-174726215:-|nuORF'] 123272 19365 VHRERRRKA True NCI_RA007_Epitope_Rep5 1206.71700443622 1206.71590993586 81.371 2 -1.057605168493724 0.32427255791986986 1.0 ['ENSG00000215045|ENST00000457091|GRID2IP'] 126846 22266 VPTAYMISP True PC9_epitope_Rep2 977.48920437445 977.48810993586 91.125 2 -1.057691105755331 0.3243338974379157 1.0 ['ENST00000360057.7_1_7:144320275-144380050:-|nuORF'] 10217 6054 CEEWQVEPWSQ True H1975_Epitope_Rep1 1419.57651580871 1419.57540993586 28.358 2 -1.0577754555412362 0.3243952353465918 1.0 ['ADAMTS12|p.A1426E|1|0.5|ENSG00000151388|chr5:33549232-33549232|G/T|missense_variant'] 23253 2738 EVRKKCAEEAQ True PC9_epitope_Rep1 1289.63978477161 1289.63812490379 14.955 3 -1.0578236299949235 0.3244260789715335 1.0 ['nc|ENSG00000085832|P42566-2|EPS15', 'ENSG00000085832|ENST00000371733|EPS15'] 59561 13311 LGRGRNSN True PC9_epitope_Rep6 872.45766143572 872.45656993586 62.857 2 -1.0578504211698667 0.3244260789715335 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ATXN2|p.A578Qfs*70|1|0.18|ENSG00000204842|chr12:111516277-111516277|C/-|frameshift_variant'] 64922 17001 LSCHCHSC True PC9_epitope_Rep2 888.3040635404002 888.30296993586 70.644 2 -1.0578752558889415 0.3244742952342223 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 27258 25200 FLWKKKLRQ True PC9_epitope_Rep1 1245.7709970716899 1245.7693649037901 101.81 3 -1.0579272171608156 0.32449627453038093 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000545213.5_1_14:24789074-24794639:-|nuORF', 'ENST00000557056.5_1_14:24787624-24791466:-|nuORF'] 44464 9131 INNVKGKG True PC9_epitope_Rep1 828.4817509252399 828.48064993586 39.974 2 -1.057999860689633 0.3245664664060655 1.0 ['ADCY2|p.I1063N|1|0.26|ENSG00000078295|chr5:7826783-7826783|T/A|missense_variant'] 89950 5583 RFYKHFCFWFR True H1975_Epitope_Rep1 1635.7921435224296 1635.79048490379 26.541 3 -1.0580012036301474 0.3245664664060655 1.0 ['chr9:120411474-120411680|281|29.8|0.69|5.43|-|1|CDK5RAP2,CDK5RAP2|1'] 52700 27332 KQKKKKKKKNL True PC9_epitope_Rep3 1397.9558377192495 1397.95420490379 112.6 3 -1.058120395396498 0.32461467829736995 1.0 ['ENST00000528205.1_1_11:57472131-57479651:-|nuORF'] 95542 8778 SAQTHFAA True PC9_epitope_Rep5 831.3875161872298 831.38640993586 38.707 2 -1.0581690652647844 0.324615021380414 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 21920 4319 ESGLELKC True PC9_epitope_Rep5 877.4215187374499 877.4204299358599 21.683 2 -1.0581803515769035 0.324615021380414 1.0 ['ENST00000264995.7_1_3:131188541-131190034:-|nuORF'] 79351 20818 PGKRRAAG True PC9_epitope_Rep6 811.4776686043098 811.47656993586 92.849 2 -1.0582046648474466 0.324615021380414 1.0 ['ENST00000312037.5_1_5:149829107-149829164:-|nuORF'] 57067 1857 LEEKIVSLIK True NCI_RA007_Epitope_Rep1 1170.72237511342 1170.72073490379 9.8149 3 -1.0582921911493937 0.3246373389995016 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 133427 10222 WFWWYWQKEKI True H1975_Epitope_Rep1 1698.8347195270596 1698.83362993586 44.262 2 -1.058298072238577 0.3246373389995016 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 111102 11425 TLEHFKRWLQP True NCI_RA007_Epitope_Rep2 1453.7830183073697 1453.78192993586 49.032 2 -1.0583358755918315 0.3246373389995016 1.0 ['ENSG00000128891|ENST00000416810|CCDC32', 'nc|ENSG00000128891|Q9BV29-2|CCDC32'] 20960 16131 EQYPRDWHLWY True H1975_Epitope_Rep2 1591.72081197363 1591.71970993586 67.26 2 -1.0583403526121764 0.3246373389995016 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 29590 11467 FVKNKKTQDK True NCI_RA007_Epitope_Rep4 1234.70337100434 1234.7022699358602 51.04 2 -1.0583599744115724 0.3246514799805904 1.0 ['ENSG00000132740|ENST00000255078|IGHMBP2'] 106401 8305 SVTDRQSF True NCI_RA007_Epitope_Rep4 938.44575933934 938.44466993586 38.757 2 -1.0583629970197785 0.3246514799805904 1.0 ['nc|ENSG00000152214|Q99578-2|RIT2', 'ENSG00000152214|ENST00000326695|RIT2'] 63189 21141 LNVDGACP True PC9_epitope_Rep5 787.35343917763 787.35234993586 86.378 2 -1.0583901336266297 0.3246514799805904 1.0 ['POLR3E|p.A86P|1|0.24|ENSG00000058600|chr16:22309015-22309015|G/C|missense_variant'] 126901 17543 VPTVPVKN True PC9_epitope_Rep3 852.50690304392 852.50580993586 72.663 2 -1.0583922553035643 0.3246514799805904 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 47134 13474 IWETFRRWHRK True H1975_Epitope_Rep1 1613.86914797317 1613.8680499358602 56.944 2 -1.058402124885916 0.3246514799805904 1.0 ['ENST00000416673.6_1_2:114369763-114384446:-|nuORF'] 13255 19410 DLVLLQKW True PC9_epitope_Rep4 1013.59096702105 1013.58986993586 82.771 2 -1.058414511766947 0.3246514799805904 1.0 ['ENST00000354914.7_1_8:27849814-27850009:-|nuORF'] 68252 15623 LTRDRRHEVA True H1975_Epitope_Rep1 1251.67961586799 1251.6785099358601 65.379 2 -1.05844820890268 0.3246514799805904 1.0 ['ENSG00000170689|ENST00000311177|HOXB9'] 125074 24559 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 106.24 3 -1.0584494864611536 0.3246514799805904 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 100706 15261 SLRFLLMIYID True PC9_epitope_Rep5 1382.7631943795798 1382.76208993586 63.712 2 -1.0584752838837674 0.3246514799805904 1.0 ['ENST00000435881.6_1_17:40723892-40724087:+|nuORF'] 66800 8935 LSVLWCMSI True PC9_epitope_Rep3 1050.52420998418 1050.52310993586 39.318 2 -1.0585184597073558 0.32465607910508437 1.0 ['ENST00000527958.5_1_11:117041336-117041564:+|nuORF'] 12871 12523 DLLKGQSRLI True PC9_epitope_Rep4 1141.68190728377 1141.68025490379 55.989 3 -1.0585393279608746 0.32465607910508437 1.0 ['nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B', 'nc|ENSG00000138182|Q96Q89-4|KIF20B'] 65968 10530 LSLRAPETVP True PC9_epitope_Rep1 1081.6131590176099 1081.61206993586 45.394 2 -1.0585595719910308 0.3246564204783886 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.A1416Pfs*6|1|0.33|ENSG00000047936|chr6:117353065-117353065|C/-|frameshift_variant', 'ROS1|p.F1067Lfs*13|1|0.31|ENSG00000047936|chr6:117362783-117362783|A/-|frameshift_variant'] 83437 5158 QDAISFDDSSK True NCI_RA007_Epitope_Rep2 1211.53061116211 1211.52950993586 24.682 2 -1.0585726946528102 0.3246564204783886 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 92597 9389 RRDWLKREEER True NCI_RA007_Epitope_Rep2 1571.82807100683 1571.82696993586 41.131 2 -1.0585877702304454 0.3246564204783886 1.0 ['TCHH|p.T464R|1|0.11|ENSG00000159450|chr1:152111826-152111826|G/C|missense_variant'] 32371 10276 GGENLEFSF True H1975_Epitope_Rep2 998.4345259493 998.43342993586 44.533 2 -1.0586343022150784 0.3246783901805736 1.0 ['ENSG00000119514|ENST00000375011|GALNT12', 'nc|ENSG00000119514|Q8IXK2-2|GALNT12'] 113505 24939 TQTAIAAAIAL True NCI_RA007_Epitope_Rep5 1042.6022599807397 1042.60116993586 103.42 2 -1.0587140055530784 0.32471806976134276 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 57627 15212 LELRKNHL True PC9_epitope_Rep5 1021.6032630402501 1021.60216993586 63.521 2 -1.0587365965902238 0.32471806976134276 1.0 ['ENST00000524575.5_2_11:101983367-101983394:+|nuORF'] 12834 15448 DLKPHNVL True PC9_epitope_Rep3 934.52361573722 934.52250993586 64.574 2 -1.0587657973468627 0.32471806976134276 1.0 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'ENST00000479187.5_1_12:40692272-40758932:+|nuORF', 'LRRK2|p.R1993L|1|0.26|ENSG00000188906|chr12:40340323-40340323|G/T|missense_variant'] 95918 11552 SDVTDPVFVP True PC9_epitope_Rep4 1074.5233409537 1074.5222499358601 52.195 2 -1.058827769073633 0.3247751173585796 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 7731 4692 ASSHSGPVL True PC9_epitope_Rep6 853.4293809992099 853.42828993586 25.421 2 -1.0588318963866905 0.3247751173585796 1.0 ['GRXCR1|p.R27P|1|0.51|ENSG00000215203|chr4:42893346-42893346|G/C|missense_variant'] 78335 14784 PASWVQRRLR True H1975_Epitope_Rep3 1267.7261721375899 1267.7250699358601 62.246 2 -1.0588699273655606 0.32479708377588085 1.0 ['ENST00000450185.5_1_2:73228706-73298794:-|nuORF'] 108140 8953 TDQHSPIPL True NCI_RA007_Epitope_Rep4 1006.5083595958998 1006.50726993586 41.272 2 -1.058946507229825 0.3248452743102906 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-2|QRICH2'] 18439 18568 EKHFFHKVN True NCI_RA007_Epitope_Rep5 1184.6090766966797 1184.60743490379 78.242 3 -1.0590039576288393 0.3248541270569724 1.0 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1', 'nc|ENSG00000171109|Q8IWA4-2|MFN1'] 121544 8085 VGKPLNLD True NCI_RA007_Epitope_Rep3 854.48616759934 854.48506993586 38.899 2 -1.0590118495596048 0.3248587200230768 1.0 ['NWD1|p.G1273Afs*12|2|0.44|ENSG00000188039|chr19:16807665-16807665|G/-|frameshift_variant', 'ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 125369 15103 VLSSAGFEAI True PC9_epitope_Rep1 992.51786165044 992.51676993586 62.912 2 -1.059025846494029 0.3248587200230768 1.0 ['nc|ENSG00000177752|Q8N8F6-2|YIPF7'] 103202 16073 SQQSSLLTV True PC9_epitope_Rep2 961.5080252427299 961.5074749679301 67.081 1 -1.0591461987232174 0.3249331305396759 1.0 ['nc|ENSG00000176225|Q86VV8-3|RTTN', 'ENSG00000176225|ENST00000640769|RTTN', 'ENST00000583043.5_1_18:67684852-67806940:-|nuORF'] 54632 12478 LADLVGVRPNL True NCI_RA007_Epitope_Rep2 1165.6819072837698 1165.68080993586 53.147 2 -1.0592406594940023 0.32499442761803615 1.0 ['ENSG00000131781|ENST00000254090|FMO5'] 477 6516 AANILKNN True PC9_epitope_Rep5 856.4766655448001 856.47556993586 30.036 2 -1.0593080209843928 0.32501638914383113 1.0 ['ENSG00000119684|ENST00000355774|MLH3', 'nc|ENSG00000119684|Q9UHC1-2|MLH3'] 137662 15646 YLYRGPSAP True PC9_epitope_Rep3 1022.5185303567798 1022.5174299358599 65.329 2 -1.0593388471082004 0.3250252389505841 1.0 ['ENSG00000125492|ENST00000263610|BARHL1'] 76325 15468 NSEIIRKMTE True PC9_epitope_Rep2 1219.6230720783099 1219.62196993586 64.774 2 -1.0593611114968828 0.32503408852527793 1.0 ['nc|ENSG00000101972|Q8N3U4|STAG2', 'ENSG00000101972|ENST00000371145|STAG2', 'STAG2|p.T718Lfs*23|1|0.38|ENSG00000101972|chrX:124066227-124066227|A/-|frameshift_variant', 'STAG2|p.A746Cfs*2|1|0.11|ENSG00000101972|chrX:124066404-124066405|-/T|frameshift_variant', 'STAG2|p.A568Cfs*20|1|0.44|ENSG00000101972|chrX:124062959-124062960|-/T|frameshift_variant'] 3285 4310 AGGGASGRSHR True NCI_RA007_Epitope_Rep2 1011.4958378495901 1011.49474993586 21.404 2 -1.059503358175062 0.32505604866728727 1.0 ['ENST00000357360.4_1_X:153707301-153707586:-|nuORF'] 108045 18956 TDFHVDFG True NCI_RA007_Epitope_Rep5 936.3977465177599 936.39664993586 79.751 2 -1.0595463600484807 0.32506489760599944 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'ENST00000526258.5_1_11:66975129-66986794:+|nuORF'] 33469 23509 GLGPRRVKPSP True PC9_epitope_Rep1 1162.6934750269797 1162.6923699358601 95.214 2 -1.059615060516541 0.32511766325366753 1.0 ['nc|ENSG00000134222|Q6PGN9-3|PSRC1', 'ENST00000492431.1_1_1:109822777-109824720:-|nuORF', 'ENSG00000134222|ENST00000369909|PSRC1', 'nc|ENSG00000134222|Q6PGN9|PSRC1', 'ENST00000459765.1_1_1:109824234-109825347:-|nuORF'] 126636 20429 VPQFSFLDIF True PC9_epitope_Rep3 1211.6226610721499 1211.6215699358602 83.833 2 -1.0596301094981186 0.32511766325366753 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 22513 19495 ETKRKNVFR True NCI_RA007_Epitope_Rep5 1176.6727395823998 1176.6716499358602 81.874 2 -1.0596412305409744 0.32511766325366753 1.0 ['ENSG00000107863|ENST00000396432|ARHGAP21', 'ENST00000401578.2_1_6:80776237-80776996:-|nuORF', 'nc|ENSG00000107863|Q5T5U3-3|ARHGAP21'] 93271 23483 RRRRWVRLRRR True PC9_epitope_Rep5 1665.0512437124796 1665.0501499358602 95.314 2 -1.0596783298764803 0.3251222485874225 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 15642 10493 EAYAELIK True PC9_epitope_Rep1 935.4963979298699 935.49530993586 45.251 2 -1.0596787278091964 0.3251222485874225 1.0 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF'] 54819 14631 LAFKERLYGP True H1975_Epitope_Rep3 1192.6604435631998 1192.65934993586 61.646 2 -1.059682126188666 0.3251310959622444 1.0 ['nc|ENSG00000185684|Q6ZTU2-2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-6|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-4|EP400P1', 'nc|ENSG00000185684|Q6ZTU2-5|EP400P1'] 100475 11819 SLPKAHTVP True PC9_epitope_Rep4 948.53926580136 948.53816993586 53.23 2 -1.0596964741908463 0.3251487900159933 1.0 ['ENSG00000268964|ENST00000601417|ERVV-2'] 119344 19289 VEMQRDVL True PC9_epitope_Rep1 988.5011660404799 988.50006993586 78.998 2 -1.0597178303396921 0.3251487900159933 1.0 ['ENSG00000112983|ENST00000254900|BRD8', 'nc|ENSG00000112983|Q9H0E9-4|BRD8', 'nc|ENSG00000112983|Q9H0E9-2|BRD8', 'nc|ENSG00000112983|Q9H0E9-3|BRD8', 'BRD8|p.M796T|1|0.17|ENSG00000112983|chr5:138160931-138160931|A/G|missense_variant'] 103119 6034 SQLRFYWDREP True NCI_RA007_Epitope_Rep1 1495.7208119736297 1495.71916490379 27.512 3 -1.0598472230772908 0.325218918777201 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.S2410Lfs*12|1|0.26|ENSG00000197653|chr12:123867998-123867998|C/-|frameshift_variant'] 125135 9479 VLPRNIAVP True H1975_Epitope_Rep1 977.6022004110898 977.60110993586 41.379 2 -1.059860221333586 0.325218918777201 1.0 ['ENSG00000131203|ENST00000518237|IDO1', 'ENST00000521636.1_1_8:39775423-39780236:+|nuORF'] 128527 6957 VSGPPPLHPDP True H1975_Epitope_Rep3 1111.56620882519 1111.5651099358602 31.722 2 -1.0599566001856555 0.3252539817788556 1.0 ['ENST00000575165.6_1_17:19314663-19315981:+|nuORF'] 37145 19804 GVTFKIEEVL True PC9_epitope_Rep2 1133.63322575585 1133.6321299358601 81.565 2 -1.0600023619411103 0.3252759352961225 1.0 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1', 'nc|ENSG00000139697|A3KN83-4|SBNO1'] 56474 4004 LDTELRYKP True H1975_Epitope_Rep3 1133.60807363717 1133.6069699358602 20.527 2 -1.0600315697830955 0.32528477984453447 1.0 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON', 'nc|ENSG00000159140|P18583-8|SON', 'ENST00000475072.1_1_21:34915398-34918735:+|nuORF'] 60550 15925 LIQDRITL True PC9_epitope_Rep1 970.58113061334 970.58002993586 66.065 2 -1.0600562225741117 0.3252936241610738 1.0 ['ENST00000477564.5_1_22:42968458-42968503:+|nuORF'] 115973 7422 TVQEIAVLK True NCI_RA007_Epitope_Rep5 999.5964463243098 999.59534993586 35.227 2 -1.0600713474250014 0.32530704801352717 1.0 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 19092 5740 ELHQNEILN True H1975_Epitope_Rep3 1108.5512870370399 1108.55018993586 27.105 2 -1.060090734131058 0.32530704801352717 1.0 ['nc|ENSG00000172765|O94876-2|TMCC1', 'ENSG00000172765|ENST00000393238|TMCC1'] 12174 5606 DIKWDFTP True PC9_epitope_Rep2 1020.4916469025999 1020.49054993586 26.95 2 -1.0601182973661296 0.32530704801352717 1.0 ['nc|ENSG00000114573|P38606-2|ATP6V1A', 'ENSG00000114573|ENST00000273398|ATP6V1A'] 108807 8008 TEQKMRRAK True NCI_RA007_Epitope_Rep1 1146.6291605182598 1146.6280699358601 35.143 2 -1.0601489133401 0.32531162754118986 1.0 ['DIAPH1|p.E1160Q|1|0.15|ENSG00000131504|chr5:141526134-141526134|C/G|missense_variant'] 101895 18549 SPLIQKINRR True NCI_RA007_Epitope_Rep3 1223.74623887583 1223.7451499358601 81.162 2 -1.0601658238222544 0.32531162754118986 1.0 ['nc|ENSG00000185594|Q6RVD6|SPATA8'] 37184 17218 GVTSTCCS True PC9_epitope_Rep5 756.2782256320401 756.27712993586 71.249 2 -1.0601896208381894 0.32532047081028653 1.0 ['KCND2|p.P617*|1|0.16|ENSG00000184408|chr7:120747812-120747813|CC/-|frameshift_variant', 'ENSG00000184408|ENST00000331113|KCND2'] 93099 19046 RRRLVLNHT True NCI_RA007_Epitope_Rep3 1163.69995738975 1163.69886993586 83.208 2 -1.0602046321780236 0.3253207858762468 1.0 ['ENSG00000261587|ENST00000696146|TMEM249'] 138625 19233 YRRGRRQLQLL True NCI_RA007_Epitope_Rep3 1457.8691479731697 1457.8675049037902 83.961 3 -1.0602092710414255 0.3253207858762468 1.0 ['ENSG00000205138|ENST00000378887|SDHAF1'] 98440 25360 SIITYKLLTKK True PC9_epitope_Rep5 1306.8224235078599 1306.8213299358601 102.76 2 -1.0602515710291558 0.3253207858762468 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 130988 23846 VVKRTVSIM True PC9_epitope_Rep4 1031.6161362230698 1031.61502993586 100.14 2 -1.0602695029004152 0.3253296285616923 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 30708 21770 GALRWREL True PC9_epitope_Rep4 999.5613982282699 999.56030993586 91.934 2 -1.06032812002456 0.32538663171690696 1.0 ['ENST00000366497.6_1_1:247611820-247611910:+|nuORF'] 91106 5062 RLMKISRHTF True NCI_RA007_Epitope_Rep2 1287.72339525627 1287.72175490379 24.315 3 -1.060333080735237 0.32538663171690696 1.0 ['ENST00000277225.9_3_9:109685683-109685788:+|nuORF'] 85561 14727 QLLHHRRSRYQ True H1975_Epitope_Rep3 1492.81236137304 1492.81126993586 62.022 2 -1.0603748580173196 0.3253872565722224 1.0 ['ENSG00000116649|ENST00000376957|SRM'] 77633 23038 NYWDELQPL True NCI_RA007_Epitope_Rep5 1176.5451390274397 1176.54349490379 95.854 3 -1.0604513702271658 0.3253872565722224 1.0 ['ENST00000503449.1_1_5:177312333-177358993:+|nuORF'] 78838 23123 PEQRHEQHYRR True PC9_epitope_Rep3 1534.7501550393 1534.74904993586 94.211 2 -1.060456338539308 0.3253872565722224 1.0 ['ENST00000395136.6_2_1:70687096-70687432:+|nuORF', 'ENST00000475204.5_1_1:70687068-70687435:+|nuORF', 'ENST00000370951.5_1_1:70671397-70687435:+|nuORF', 'ENST00000463877.1_1_1:70671397-70687435:+|nuORF'] 130504 15976 VTVTVTNN True NCI_RA007_Epitope_Rep3 846.4446967101801 846.44414496793 70.513 1 -1.0604599349472907 0.3253872565722224 1.0 ['SAG|p.K236N|1|0.34|ENSG00000130561|chr2:233329552-233329552|G/T|missense_variant', 'ENSG00000130561|ENST00000409110|SAG'] 117469 18295 VAEAGVFP True PC9_epitope_Rep6 788.4068546494799 788.40630496793 83.014 1 -1.0604800025029943 0.3253872565722224 1.0 ['ENST00000372797.7_2_1:40537598-40537793:+|nuORF'] 123440 18641 VIEKHVFVVE True NCI_RA007_Epitope_Rep5 1197.6757592741699 1197.67411490379 78.516 3 -1.0605150327647628 0.3253872565722224 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27', 'SENP2-ANKRD27|1|fusion'] 104617 7588 SSVESAVEAI True PC9_epitope_Rep5 990.4869554449799 990.48584993586 34.136 2 -1.0606802393753434 0.32542230725883603 1.0 ['ENSG00000103154|ENST00000305202|NECAB2', 'nc|ENSG00000103154|Q7Z6G3-2|NECAB2'] 24417 5079 FAGCGGYK True NCI_RA007_Epitope_Rep5 801.34795987437 801.34686993586 26.237 2 -1.060738152424512 0.3254268828054358 1.0 ['ENST00000550464.5_1_12:56352348-56359775:-|nuORF', 'ENST00000449260.6_1_12:56355419-56359775:-|nuORF'] 66263 11426 LSQDLIVADGP True H1975_Epitope_Rep1 1126.5870038394198 1126.5859099358602 48.93 2 -1.060750922235104 0.3254268828054358 1.0 ['FKBP15|p.G1133Vfs*45|2|0.29|ENSG00000119321|chr9:113169311-113169311|C/-|frameshift_variant', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-3|FKBP15'] 71814 15479 MPAFLHEE True PC9_epitope_Rep2 972.43750315476 972.43640993586 64.817 2 -1.0607679538128043 0.3254357227099987 1.0 ['nc|ENSG00000124900|Q9BSJ1-2|TRIM51', 'ENST00000505076.1_1_11:48967299-48973146:+|nuORF', 'TRIM51|p.G323Efs*49|1|0.24|ENSG00000124900|chr11:55891240-55891240|G/-|frameshift_variant', 'ENSG00000124900|ENST00000449290|TRIM51'] 127608 14517 VRAGAGGVGLG True NCI_RA007_Epitope_Rep4 912.5141136826799 912.5130099358599 63.205 2 -1.060925711677912 0.3255058182199392 1.0 ['ENST00000496700.5_1_14:105953068-105953266:+|nuORF'] 93928 2757 RVKVLLVLNLI True H1975_Epitope_Rep1 1278.8751277870597 1278.87402993586 14.167 2 -1.0609387187409458 0.3255058182199392 1.0 ['GALNT17|p.L576Pfs*19|1|0.28|ENSG00000185274|chr7:71712069-71712070|-/G|frameshift_variant', 'ENSG00000185274|ENST00000333538|GALNT17'] 95735 21262 SCCCTHCCCP True H1975_Epitope_Rep2 1058.25705597194 1058.2559499358601 87.996 2 -1.0609856301627212 0.32552776066987277 1.0 ['ENSG00000204323|ENST00000375215|SMIM5'] 37506 5506 GYHEEPEAR True NCI_RA007_Epitope_Rep2 1086.47303671634 1086.47192993586 26.032 2 -1.0610294165071488 0.3255411709209078 1.0 ['ENST00000486668.5_1_1:228333270-228334576:+|nuORF'] 66766 10537 LSTYTTLR True PC9_epitope_Rep4 953.51819600361 953.51708993586 48.258 2 -1.0610414533386943 0.3255411709209078 1.0 ['ENST00000377452.3_1_20:18744044-18744080:+|nuORF'] 98366 9320 SIHLQRWDKYS True NCI_RA007_Epitope_Rep2 1431.7258973540702 1431.72480993586 40.86 2 -1.061083333760002 0.3255411709209078 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF'] 61369 5078 LLEIMSTCSSK True NCI_RA007_Epitope_Rep2 1210.5937460959801 1210.5926499358602 24.377 2 -1.0611183182623534 0.32556311175753766 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152', 'nc|ENSG00000103995|O94986-3|CEP152'] 32255 18188 GFMPLFPRL True PC9_epitope_Rep1 1076.5841078188 1076.5830099358602 74.75 2 -1.0612538814148107 0.325624361225399 1.0 ['ENST00000477192.5_1_10:81585177-81585291:-|nuORF'] 128944 14674 VSVEILAV True PC9_epitope_Rep6 828.4956696538799 828.49456993586 68.371 2 -1.061353087296358 0.32567250619111887 1.0 ['ENST00000569153.1_1_16:64294558-64295142:-|nuORF'] 98289 19929 SIFLSSFRVP True PC9_epitope_Rep3 1151.63389446219 1151.63278993586 81.9 2 -1.061356031668615 0.32569444444444445 1.0 ['nc|ENSG00000139734|Q9NSV4-2|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-1|DIAPH3', 'DIAPH3|p.R1081Kfs*25|2|0.4|ENSG00000139734|chr13:59774745-59774746|-/T|frameshift_variant', 'nc|ENSG00000139734|Q9NSV4-7|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-6|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-5|DIAPH3', 'nc|ENSG00000139734|Q9NSV4-4|DIAPH3', 'ENSG00000139734|ENST00000400324|DIAPH3'] 83787 21930 QEEKERKLQEL True H1975_Epitope_Rep1 1428.7572570519999 1428.75616993586 91.216 2 -1.061419374316369 0.3257252168444223 1.0 ['ENSG00000023892|ENST00000316637|DEF6'] 81897 9628 PSLNPDGFE True H1975_Epitope_Rep2 974.4345259493 974.43342993586 42.012 2 -1.0614380104333752 0.3257252168444223 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000109472|P16870-2|CPE', 'ENSG00000109472|ENST00000402744|CPE'] 100631 11850 SLQQEHDI True PC9_epitope_Rep5 968.45632402304 968.45522993586 50.58 2 -1.061452859768163 0.32573405133446015 1.0 ['ENST00000425026.1_1_Y:10028050-10028227:-|nuORF'] 13623 14927 DPSVTSKVGT True PC9_epitope_Rep5 989.50293986229 989.50184993586 62.422 2 -1.0614664743414626 0.32574288559299824 1.0 ['ENST00000534629.1_1_15:43231619-43231877:-|nuORF'] 124102 11265 VKTLNDSL True PC9_epitope_Rep1 888.4916469026 888.49054993586 48.211 2 -1.0615050352183524 0.32575171962004584 1.0 ['ENSG00000135205|ENST00000285871|CCDC146', 'nc|ENSG00000135205|Q8IYE0-2|CCDC146'] 122490 23043 VGSRGERKPR True PC9_epitope_Rep5 1140.6475874637197 1140.64707496793 93.626 1 -1.0615148560489098 0.325760553415612 1.0 ['ENST00000371571.4_2_20:49639410-49639479:-|nuORF'] 22018 13875 ESQAAKDLLYR True NCI_RA007_Epitope_Rep1 1292.67246479888 1292.6713699358602 57.991 2 -1.0616287994048004 0.32576938697970576 1.0 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 18861 15394 ELEKEFHY True H1975_Epitope_Rep1 1093.50802524273 1093.5069299358602 64.482 2 -1.0616649077605993 0.3257739522330962 1.0 ['ENSG00000108511|ENST00000225648|HOXB6', 'CDX2|p.Y210H|1|0.36|ENSG00000165556|chr13:27964929-27964929|A/G|missense_variant', 'ENST00000567101.2_1_17:46685206-46710927:-|nuORF', 'nc|ENSG00000113722|P47902-2|CDX1', 'ENSG00000260027|ENST00000239165|HOXB7', 'ENSG00000198353|ENST00000430889|HOXC4', 'ENSG00000113722|ENST00000231656|CDX1', 'ENSG00000165556|ENST00000381020|CDX2'] 122127 9593 VGRGYASP True PC9_epitope_Rep2 805.4082516318099 805.40714993586 42.244 2 -1.0616903715413573 0.3257739522330962 1.0 ['ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 82796 19675 PVRTWERPLRP True PC9_epitope_Rep2 1405.79425169741 1405.7931499358601 81.067 2 -1.0617176506565476 0.32578278527446614 1.0 ['nc|ENSG00000178217|Q5SQS7-2|SH2D4B', 'nc|ENSG00000178217|Q5SQS7|SH2D4B'] 125091 25984 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 105.12 3 -1.061896296193548 0.3258226786837141 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 11201 6509 DELEFAKRFEL True H1975_Epitope_Rep1 1395.70343057399 1395.70232993586 30.097 2 -1.0618996263093705 0.3258226786837141 1.0 ['ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1', 'nc|ENSG00000100592|Q9Y4D1-3|DAAM1', 'ENST00000556894.1_1_14:59791074-59792827:+|nuORF'] 38967 9604 HIWNYFMHQEK True H1975_Epitope_Rep3 1531.7030537345097 1531.70194993586 41.955 2 -1.0619196248443379 0.3258226786837141 1.0 ['ENST00000505402.1_1_5:96031588-96050414:+|nuORF', 'ENST00000504221.5_1_5:96038575-96050414:+|nuORF'] 78270 4043 PARPTLLEQV True PC9_epitope_Rep2 1122.6397081186199 1122.63805490379 20.821 3 -1.0619440223633447 0.3258226786837141 1.0 ['ENSG00000133111|ENST00000255476|RFXAP'] 110577 15180 TISGEPALLP True H1975_Epitope_Rep3 996.5491617787198 996.54861496793 63.792 1 -1.061948301403025 0.3258226786837141 1.0 ['nc|ENSG00000165802|Q6X4W1-4|NSMF', 'nc|ENSG00000165802|Q6X4W1-6|NSMF', 'nc|ENSG00000165802|Q6X4W1-3|NSMF', 'nc|ENSG00000165802|Q6X4W1-2|NSMF', 'ENSG00000165802|ENST00000371475|NSMF', 'nc|ENSG00000165802|Q6X4W1-5|NSMF'] 134595 24548 WWCELIVKHK True H1975_Epitope_Rep3 1340.7063482098 1340.7052499358601 102.16 2 -1.0619712228431324 0.3258226786837141 1.0 ['AOPEP|p.R748W|1|0.09|ENSG00000148120|chr9:95080703-95080703|C/T|missense_variant'] 133177 10697 WDRRRWNFRQK True NCI_RA007_Epitope_Rep2 1646.8654595750597 1646.8643699358602 46.209 2 -1.062044110881669 0.32588390950653023 1.0 ['ENST00000448841.5_1_10:104575113-104575296:+|nuORF'] 33423 7359 GLGDSRHR True NCI_RA007_Epitope_Rep1 896.45766143572 896.45656993586 32.619 2 -1.0621219689487271 0.32588420225307835 1.0 ['DLGAP4|p.P9H|1|0.17|ENSG00000080845|chr20:36431743-36431743|C/A|missense_variant'] 55540 9086 LAYFFDAPE True PC9_epitope_Rep4 1071.4913125494297 1071.49020993586 42.536 2 -1.0621253040706955 0.32588420225307835 1.0 ['nc|ENSG00000058799|Q9Y548-2|YIPF1', 'ENSG00000058799|ENST00000072644|YIPF1'] 136317 8743 YGYLHKQAL True H1975_Epitope_Rep1 1091.57637958607 1091.5752899358602 38.559 2 -1.0621437744785434 0.32588420225307835 1.0 ['ALG13|p.S166Y|1|0.19|ENSG00000101901|chrX:111708140-111708140|C/A|missense_variant'] 66508 17119 LSSCRHYMP True H1975_Epitope_Rep2 1092.48447043052 1092.48336993586 71.123 2 -1.0621535092765808 0.32589303257751406 1.0 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111', 'RNF111|p.S638C|1|0.35|ENSG00000157450|chr15:59076180-59076180|C/G|missense_variant'] 121545 8136 VGKPLNLD True NCI_RA007_Epitope_Rep4 854.48616759934 854.48506993586 38.085 2 -1.062180273256449 0.32590186267061383 1.0 ['NWD1|p.G1273Afs*12|2|0.44|ENSG00000188039|chr19:16807665-16807665|G/-|frameshift_variant', 'ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 91093 5768 RLLRVLKLA True PC9_epitope_Rep5 1080.74953335112 1080.74842993586 27.18 2 -1.0622057141064212 0.3259499888660388 1.0 ['SCN4A|p.F677L|1|0.42|ENSG00000007314|chr17:63957509-63957509|A/G|missense_variant'] 132636 11008 VYQHDFRGP True PC9_epitope_Rep3 1117.5304920228098 1117.52938993586 47.333 2 -1.0622427996880561 0.3260112124069999 1.0 ['OR5A2|p.C170R|1|0.21|ENSG00000172324|chr11:59422446-59422446|A/G|missense_variant'] 63230 12280 LPAAETWI True PC9_epitope_Rep4 899.47526856247 899.47416993586 55.052 2 -1.0623061941644247 0.32602886857202734 1.0 ['ENSG00000169836|ENST00000304883|TACR3'] 22364 10083 ETERAFLLSP True H1975_Epitope_Rep3 1161.6029882567298 1161.60188993586 43.823 2 -1.0623179601483614 0.32602886857202734 1.0 ['ENST00000381312.5_1_10:1779465-1779666:-|nuORF'] 82068 13141 PSVTWLPSY True PC9_epitope_Rep2 1048.52294703088 1048.52184993586 55.819 2 -1.0623602328508264 0.3260638924908641 1.0 ['ENST00000602775.5_1_5:139929747-139930248:-|nuORF'] 65283 9301 LSEIQALRA True H1975_Epitope_Rep1 999.5712942056299 999.57018993586 40.684 2 -1.0623999208192343 0.3260949287510478 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 31302 5125 GDYFWWLLLPV True NCI_RA007_Epitope_Rep2 1407.72270946659 1407.7216099358602 24.558 2 -1.0624019295730092 0.3260949287510478 1.0 ['ENSG00000141469|ENST00000321925|SLC14A1', 'nc|ENSG00000141469|Q13336-2|SLC14A1'] 37351 6482 GVWNYISP True PC9_epitope_Rep5 934.45486747106 934.45376993586 29.905 2 -1.0624056197382838 0.3260949287510478 1.0 ['ENSG00000072041|ENST00000266682|SLC6A15', 'nc|ENSG00000072041|Q9H2J7-3|SLC6A15', 'nc|ENSG00000072041|Q9H2J7-2|SLC6A15'] 32374 8974 GGETAETPETP True PC9_epitope_Rep5 1087.46694827639 1087.4658499358602 39.462 2 -1.062406011033914 0.3260949287510478 1.0 ['ENST00000526623.2_1_11:64948241-64949272:-|nuORF'] 22595 6435 ETPQTVPA True PC9_epitope_Rep1 841.4181476091699 841.41704993586 29.559 2 -1.062411008125024 0.3260949287510478 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 91525 12422 RPADIKVVA True PC9_epitope_Rep5 967.5814649665099 967.58036993586 52.78 2 -1.0624232130200597 0.3260963505178939 1.0 ['nc|ENSG00000163803|Q6P1J6-3|PLB1', 'ENSG00000163803|ENST00000327757|PLB1', 'nc|ENSG00000163803|Q6P1J6-5|PLB1', 'ENST00000479065.5_1_2:28829398-28841281:+|nuORF'] 28254 3216 FRTHFGGG True PC9_epitope_Rep3 877.4194850218497 877.41838993586 17.402 2 -1.0624427544243251 0.3260963505178939 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 94585 23580 RYKFIHLNV True NCI_RA007_Epitope_Rep3 1188.6767623336798 1188.67566993586 102.29 2 -1.062446440800175 0.3260963505178939 1.0 ['nc|ENSG00000179873|P59045-3|NLRP11', 'nc|ENSG00000179873|P59045-2|NLRP11', 'ENSG00000179873|ENST00000589093|NLRP11', 'NLRP11|p.I561Rfs*19|1|0.16|ENSG00000179873|chr19:55808930-55808931|-/TG|frameshift_variant'] 132812 4044 VYSSQRERHR True PC9_epitope_Rep2 1316.6697794602799 1316.6681249037902 20.825 3 -1.0624933433464396 0.3260963505178939 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|99|3|sense', 'ENST00000435560.1_1_3:178819298-178865723:-|nuORF'] 63829 7373 LPTEDLREGRW True NCI_RA007_Epitope_Rep3 1370.6942628726197 1370.6931699358602 36.129 2 -1.0625985789546484 0.3260963505178939 1.0 ['ENST00000216968.4_1_20:33764702-33764822:+|nuORF'] 59215 16719 LGGCHGGR True H1975_Epitope_Rep3 755.3496912098699 755.3491449679301 69.837 1 -1.0626014064169202 0.3260963505178939 1.0 ['ENST00000560486.2_1_15:100797173-100802589:-|nuORF'] 81856 5625 PSIGAQQPPA True PC9_epitope_Rep6 964.4977949122 964.49668993586 29.719 2 -1.062611226160893 0.3260963505178939 1.0 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 40505 15426 HSFLYIYYVHW True PC9_epitope_Rep3 1526.7346711326202 1526.73245987172 64.491 4 -1.0626166632195677 0.3260963505178939 1.0 ['ENSG00000186471|ENST00000371431|AKAP14'] 134718 10695 WWRWLTFWRR True H1975_Epitope_Rep1 1591.8313059124698 1591.83020993586 46.098 2 -1.0626335795000497 0.3260963505178939 1.0 ['nc|ENSG00000164284|Q8TAA5-2|GRPEL2'] 119200 10950 VEKLREVK True PC9_epitope_Rep1 999.60767971435 999.60658993586 47.008 2 -1.0626898842431898 0.3260963505178939 1.0 ['ENSG00000132256|ENST00000380034|TRIM5', 'nc|ENSG00000132256|Q9C035-6|TRIM5', 'nc|ENSG00000132256|Q9C035-5|TRIM5', 'nc|ENSG00000132256|Q9C035-3|TRIM5', 'nc|ENSG00000132256|Q9C035-2|TRIM5', 'nc|ENSG00000132256|Q9C035-4|TRIM5'] 66414 9575 LSRKFKDWA True H1975_Epitope_Rep1 1149.62947778809 1149.62838993586 41.754 2 -1.0627246527033125 0.3260963505178939 1.0 ['TRPV4|p.V469Sfs*66|1|0.15|ENSG00000111199|chr12:109794415-109794415|C/-|frameshift_variant', 'nc|ENSG00000111199|Q9HBA0-4|TRPV4', 'nc|ENSG00000111199|Q9HBA0-5|TRPV4', 'nc|ENSG00000111199|Q9HBA0-3|TRPV4', 'ENSG00000111199|ENST00000261740|TRPV4'] 100493 10871 SLPKITRSVMP True H1975_Epitope_Rep3 1227.7009284761898 1227.6998299358602 46.898 2 -1.0627491446223436 0.3260963505178939 1.0 ['ENST00000367137.3_1_1:205759622-205759775:-|nuORF'] 28688 10391 FSTDIPPTNAV True PC9_epitope_Rep2 1160.5713537752802 1160.5702499358601 45.292 2 -1.0627626140292834 0.3260963505178939 1.0 ['ENSG00000263513|ENST00000584486|FAM72C', 'ENSG00000215784|ENST00000400889|FAM72D', 'ENSG00000196550|ENST00000367128|FAM72A', 'ENSG00000188610|ENST00000369390|FAM72B'] 5600 5307 ANWDTRIAA True PC9_epitope_Rep2 1016.5039429217999 1016.50284993586 25.802 2 -1.0627823595225532 0.3260963505178939 1.0 ['ENSG00000095564|ENST00000265990|BTAF1'] 93926 2619 RVKVLLVLNLI True H1975_Epitope_Rep1 1278.8751277870597 1278.87402993586 13.491 2 -1.0628290522573498 0.3260963505178939 1.0 ['GALNT17|p.L576Pfs*19|1|0.28|ENSG00000185274|chr7:71712069-71712070|-/G|frameshift_variant', 'ENSG00000185274|ENST00000333538|GALNT17'] 111674 10334 TLPGQSLIDK True NCI_RA007_Epitope_Rep2 1070.5971746003 1070.5960699358602 44.788 2 -1.0628379958972078 0.3261051749423842 1.0 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant', 'ENST00000486964.5_1_2:86305209-86332944:-|nuORF'] 14712 21547 DVQQPLSQIP True PC9_epitope_Rep2 1123.5873381925899 1123.58624993586 88.348 2 -1.0628652663481468 0.3261097289511588 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 66168 17830 LSPESPPLLP True PC9_epitope_Rep1 1048.580461907 1048.57936993586 73.376 2 -1.0628656176747115 0.3261097289511588 1.0 ['ENST00000423414.5_1_7:130668826-130792751:-|nuORF', 'ENST00000451786.5_1_7:130737305-130792820:-|nuORF', 'ENST00000429901.1_1_7:130737210-130792820:-|nuORF'] 130011 10223 VTPNGSNK True PC9_epitope_Rep1 815.41373093507 815.41262993586 44.203 2 -1.062902099220965 0.32611855285383196 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 7796 11722 ASWDRLPGP True PC9_epitope_Rep3 997.4981292653699 997.49702993586 50.107 2 -1.0629599814211028 0.32613619996595655 1.0 ['ENST00000568763.1_1_16:30197335-30197653:+|nuORF'] 120571 14942 VGAEHTLAL True PC9_epitope_Rep4 909.4919812557699 909.49088993586 65.415 2 -1.0629771142832836 0.32613619996595655 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant'] 136876 10522 YIYEICCWS True H1975_Epitope_Rep2 1178.47765371458 1178.47654993586 45.493 2 -1.0631009441675185 0.3262497708644303 1.0 ['ENSG00000146385|ENST00000275200|TAAR8'] 30622 5524 GALAQGKA True NCI_RA007_Epitope_Rep5 714.4024379753799 714.4018849679301 27.934 1 -1.0631325452584355 0.3262716857610475 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'ENST00000465356.1_1_21:47860977-47862746:+|nuORF'] 66568 15604 LSSLHLSPP True PC9_epitope_Rep6 949.52328138405 949.52218993586 72.227 2 -1.0631342728330486 0.3262805069655389 1.0 ['ENST00000564440.5_1_15:72491410-72491662:-|nuORF'] 28591 13310 FSPERMRMRTR True H1975_Epitope_Rep1 1465.7394563265698 1465.73834993586 56.301 2 -1.0631454948358041 0.32628932793903925 1.0 ['ENST00000436518.5_1_22:20126736-20127081:+|nuORF'] 58041 15130 LERKERELQNT True NCI_RA007_Epitope_Rep1 1414.7528403778997 1414.75174993586 62.921 2 -1.0632116751568452 0.32631124145696405 1.0 ['ENST00000566557.5_1_15:75144368-75165596:-|nuORF', 'ENSG00000140497|ENST00000268099|SCAMP2', 'ENST00000567638.1_1_15:75140939-75144521:-|nuORF', 'ENST00000563829.5_1_15:75137426-75144629:-|nuORF'] 58447 21527 LEWLHDEIS True NCI_RA007_Epitope_Rep5 1140.54513902744 1140.54349490379 89.887 3 -1.0632541885813598 0.3263157894736842 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3', 'nc|ENSG00000075856|Q15020-2|SART3'] 19387 7159 ELNVMMHFIY True NCI_RA007_Epitope_Rep2 1295.60425121003 1295.60314993586 32.469 2 -1.0632614627661114 0.3263157894736842 1.0 ['ENST00000370382.7_2_1:92546128-92605069:+|nuORF', 'nc|ENSG00000189195|Q5XKL5-4|BTBD8', 'nc|ENSG00000189195|Q5XKL5|BTBD8'] 100919 20275 SLSLSVKINKT True PC9_epitope_Rep3 1188.70778767844 1188.7061549037899 83.244 3 -1.063288012618376 0.3263422489297357 1.0 ['ENST00000313949.11_1_20:57486041-57486158:+|nuORF'] 30811 8414 GAPQQFPYPP True H1975_Epitope_Rep3 1100.52909504048 1100.5279899358602 37.348 2 -1.063297825132626 0.3263422489297357 1.0 ['nc|ENSG00000084676|Q15788-2|NCOA1', 'nc|ENSG00000084676|Q15788-3|NCOA1', 'ENSG00000084676|ENST00000348332|NCOA1'] 99985 12804 SLISKHGTL True PC9_epitope_Rep3 954.5498304850599 954.54872993586 54.273 2 -1.0633124646875542 0.3263422489297357 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 12832 11894 DLKPEQSVR True PC9_epitope_Rep4 1070.5720224816198 1070.57092993586 53.525 2 -1.0634239983327607 0.3264210719241746 1.0 ['ENSG00000139174|ENST00000345127|PRICKLE1'] 63089 13624 LNMERNNRYQP True PC9_epitope_Rep3 1433.68338091909 1433.6822899358601 57.469 2 -1.0634365195151778 0.3264210719241746 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|11|1|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|7|1|sense'] 56260 13578 LDQFERQLPLS True PC9_epitope_Rep1 1344.70376492716 1344.70266993586 57.084 2 -1.063456336964246 0.3264210719241746 1.0 ['nc|ENSG00000170579|O14490-7|DLGAP1', 'ENSG00000170579|ENST00000315677|DLGAP1'] 15456 10012 EAPGFSNTSL True NCI_RA007_Epitope_Rep5 1021.4716397340101 1021.47054993586 45.152 2 -1.0635879002075304 0.3264739763326003 1.0 ['ENSG00000069248|ENST00000261396|NUP133'] 128512 7877 VSGGDDYKIK True NCI_RA007_Epitope_Rep1 1080.54513902744 1080.5440499358601 34.633 2 -1.063610455715363 0.3264739763326003 1.0 ['ENSG00000122218|ENST00000241704|COPA', 'nc|ENSG00000122218|P53621-2|COPA', 'ENST00000541366.1_1_1:160303391-160312960:-|nuORF', 'ENST00000545266.1_1_1:160309677-160309767:-|nuORF'] 134174 23539 WRKVLLKG True PC9_epitope_Rep6 998.6389202729798 998.6378299358599 103.69 2 -1.0636552568113253 0.3264739763326003 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 82062 6399 PSVQHLGEV True PC9_epitope_Rep2 964.4977949121999 964.49668993586 30.021 2 -1.0636810371297674 0.3264739763326003 1.0 ['ENST00000592869.1_1_17:74152379-74154596:-|nuORF'] 91232 25069 RLRRLERRRRK True PC9_epitope_Rep5 1594.0240259051295 1594.02238490379 101.57 3 -1.0636876541851417 0.3264739763326003 1.0 ['nc|ENSG00000196557|O95180-2|CACNA1H'] 38424 16087 HGRRSNVL True PC9_epitope_Rep1 937.5205960454499 937.51948993586 66.693 2 -1.0637029472652832 0.3264739763326003 1.0 ['nc|ENSG00000178053|P58340-2|MLF1', 'nc|ENSG00000178053|P58340-5|MLF1', 'nc|ENSG00000178053|P58340-4|MLF1', 'nc|ENSG00000178053|P58340|MLF1', 'ENSG00000178053|ENST00000466246|MLF1', 'nc|ENSG00000178053|P58340-3|MLF1'] 86120 4492 QPQQQYNHPN True H1975_Epitope_Rep3 1252.5584976757998 1252.55686490379 22.398 3 -1.0637267458273603 0.3264827929260534 1.0 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 134591 24357 WWAGVGGHK True PC9_epitope_Rep5 996.4929843152798 996.49188993586 98.722 2 -1.0637834641549537 0.3264918779533228 1.0 ['LTR7Y_dup61|chr4:182818487-182818919:+|1.1571623652672294|0.2488539134292584|2.22|400.0|30|3|anti-sense'] 15827 14146 EDKKVRVQ True NCI_RA007_Epitope_Rep4 1000.5665431783598 1000.56544993586 61.692 2 -1.0637864081436499 0.3264918779533228 1.0 ['CDK14|p.F103Lfs*39|1|0.23|ENSG00000058091|chr7:90726750-90726750|T/-|frameshift_variant', 'nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14'] 122273 5445 VGRRSPGN True PC9_epitope_Rep1 841.4518477792899 841.45074993586 25.777 2 -1.063791459923255 0.3264918779533228 1.0 ['ENSG00000178605|ENST00000326153|GTPBP6'] 37837 23048 HDKRKKSRS True PC9_epitope_Rep5 1140.64758746372 1140.64594490379 93.645 3 -1.0637923221414902 0.3264918779533228 1.0 ['ENSG00000151725|ENST00000281453|CENPU', 'nc|ENSG00000151725|Q71F23-3|CENPU', 'ENST00000506535.1_1_4:185631525-185635040:-|nuORF'] 89951 5678 RFYKHFCFWFR True H1975_Epitope_Rep1 1635.7921435224296 1635.79048490379 26.907 3 -1.063850859118357 0.32650950928677075 1.0 ['chr9:120411474-120411680|281|29.8|0.69|5.43|-|1|CDK5RAP2,CDK5RAP2|1'] 33649 4419 GLPCCWDYS True PC9_epitope_Rep4 1042.38883871018 1042.38774993586 23.448 2 -1.063852325958322 0.32650950928677075 1.0 ['ENSG00000170634|ENST00000607452|ACYP2'] 99972 7769 SLIPTRGGAP True PC9_epitope_Rep2 967.5450794577898 967.5439899358599 35.257 2 -1.0638950422683022 0.3265183246073298 1.0 ['ENST00000531239.2_1_11:67120490-67120989:-|nuORF'] 26226 28180 FHYDWISIPL True H1975_Epitope_Rep2 1289.6444591458899 1289.64280490379 117.61 3 -1.0639555570949069 0.32657949503278755 1.0 ['ENSG00000142959|ENST00000372207|BEST4'] 59573 7143 LGRNSGSALY True H1975_Epitope_Rep3 1036.53015766964 1036.5290699358602 32.448 2 -1.0639764306267239 0.32659284854196113 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 123586 1545 VIKFLIIIA True PC9_epitope_Rep4 1028.6997891940398 1028.69868993586 8.9115 2 -1.063977435090237 0.32659284854196113 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 52683 13337 KQGKAVLL True NCI_RA007_Epitope_Rep4 855.5541875895099 855.55308993586 58.453 2 -1.0639946660633024 0.32659284854196113 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant'] 61813 4477 LLKSYILFGEK True NCI_RA007_Epitope_Rep2 1309.7645742785696 1309.76293490379 22.048 3 -1.0640592101689406 0.32664092664092664 1.0 ['ENSG00000134109|ENST00000256497|EDEM1', 'nc|ENSG00000134109|Q92611-2|EDEM1'] 46317 11339 ITEYQCHQY True PC9_epitope_Rep5 1183.49680893603 1183.49570993586 48.612 2 -1.064092819389965 0.3266497395492501 1.0 ['ENSG00000090863|ENST00000422840|GLG1', 'nc|ENSG00000090863|Q92896-3|GLG1', 'nc|ENSG00000090863|Q92896-2|GLG1'] 91449 7504 RNPVKYSV True PC9_epitope_Rep2 961.5345147740899 961.53340993586 34.233 2 -1.0641453306936992 0.32666736467385615 1.0 ['nc|ENSG00000113361|P55285-2|CDH6', 'ENSG00000113361|ENST00000265071|CDH6'] 124069 21540 VKRLLKKQVVR True NCI_RA007_Epitope_Rep4 1365.92962297141 1365.92797490379 93.386 3 -1.064148455247004 0.32666736467385615 1.0 ['ENSG00000175931|ENST00000319380|UBE2O', 'UBE2O|p.H1018Tfs*12|1|0.15|ENSG00000175931|chr17:76392008-76392008|G/-|frameshift_variant'] 80385 16348 PLGVRGRG True H1975_Epitope_Rep1 810.4824196315799 810.48187496793 68.242 1 -1.0643865352832345 0.3267416142077504 1.0 ['ENST00000257897.7_2_12:58119581-58120334:-|nuORF'] 55754 18459 LDEALQHP True PC9_epitope_Rep3 921.45559574705 921.45448993586 76.206 2 -1.0644102395467172 0.3267504253369978 1.0 ['ENSG00000113240|ENST00000316308|CLK4', 'ENST00000519132.5_1_5:178030620-178030809:-|nuORF', 'ENST00000520878.5_1_5:178030620-178044471:-|nuORF', 'ENST00000519583.5_1_5:178030620-178044013:-|nuORF'] 33275 18957 GLARHWSIHT True H1975_Epitope_Rep1 1176.6152247062798 1176.61412993586 79.042 2 -1.0644405508217658 0.32678541047754905 1.0 ['nc|ENSG00000197608|Q6ZN19-2|ZNF841', 'nc|ENSG00000197608|Q6ZN19|ZNF841', 'ENSG00000197608|ENST00000594440|ZNF841'] 108041 27108 TDEYRPPVWK True H1975_Epitope_Rep1 1289.6404363946097 1289.63878490379 113.25 3 -1.064475168128812 0.32679422080301523 1.0 ['nc|ENSG00000128656|P15882-3|CHN1', 'ENSG00000128656|ENST00000409900|CHN1', 'ENST00000488080.5_1_2:175711684-175870060:-|nuORF'] 56588 13259 LDWLEPSKP True PC9_epitope_Rep3 1083.5600608155898 1083.5589699358602 56.033 2 -1.064496582248876 0.32681611767631163 1.0 ['ENST00000294072.8_2_11:61116358-61116451:-|nuORF'] 75053 25529 NMERPVRYI True PC9_epitope_Rep4 1176.6073624445198 1176.60571490379 107.25 3 -1.064551616481908 0.3268249273693302 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 130169 13512 VTRSAQAA True NCI_RA007_Epitope_Rep3 802.4297153523798 802.4291649679301 60.438 1 -1.0646952789712847 0.32685990970359224 1.0 ['ENSG00000143627|ENST00000342741|PKLR', 'nc|ENSG00000143627|P30613-2|PKLR'] 128015 17046 VRRAGLGP True NCI_RA007_Epitope_Rep3 824.4980696957199 824.49696993586 74.913 2 -1.0648286186987612 0.3269603224455611 1.0 ['ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 128406 14168 VSDVRELVP True PC9_epitope_Rep2 1012.5553097883198 1012.55420993586 59.766 2 -1.064852953979775 0.3269822159990578 1.0 ['ENSG00000126749|ENST00000599672|EMG1'] 33971 16087 GNFKFWDTEL True PC9_epitope_Rep4 1255.5873381925899 1255.58624993586 69.814 2 -1.064906642023642 0.32699102305739486 1.0 ['ENST00000262394.6_2_17:25639733-25639799:+|nuORF'] 29169 13518 FTYFYKRKEYW True H1975_Epitope_Rep1 1629.79799966517 1629.7969099358602 57.118 2 -1.0650214810305014 0.3270260013870896 1.0 ['MMP16|p.G504R|1|0.24|ENSG00000156103|chr8:88041775-88041775|C/T|missense_variant'] 44350 9656 IMMFIGGP True PC9_epitope_Rep1 864.4237676669198 864.42266993586 41.998 2 -1.0650925692189939 0.3270740643810521 1.0 ['nc|ENSG00000100934|Q15436-2|SEC23A', 'ENSG00000100934|ENST00000307712|SEC23A'] 119351 7914 VENGLQQL True H1975_Epitope_Rep3 899.4712458111899 899.47014993586 35.412 2 -1.0651359162401115 0.3270959553002447 1.0 ['CON__ENSEMBL:ENSBTAP00000024146'] 87606 16958 QTSLEMFYS True PC9_epitope_Rep1 1104.47976188956 1104.4786699358601 70.052 2 -1.0651733640439702 0.3271047604093062 1.0 ['nc|ENSG00000136122|Q6PGQ7-2|BORA', 'ENSG00000136122|ENST00000390667|BORA'] 106052 14621 SVLSCVRSL True PC9_epitope_Rep5 962.52190148506 962.52080993586 61.24 2 -1.0651877083428902 0.3271135652879369 1.0 ['ENSG00000197993|ENST00000355265|KEL'] 124507 20593 VLFNKVLVN True PC9_epitope_Rep4 1044.6331661861998 1044.63206993586 87.363 2 -1.0652084733164329 0.32712236993614574 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2', 'ENST00000308080.9_1_18:2906258-2913399:+|nuORF'] 88586 12582 RALKFPAL True PC9_epitope_Rep3 914.5701720068199 914.5690699358599 53.42 2 -1.0652142525577448 0.3271311743539418 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant'] 44620 20898 IPHTYPDTP True PC9_epitope_Rep1 1039.4974605590298 1039.49636993586 85.205 2 -1.06532007446536 0.327192316750844 1.0 ['nc|ENSG00000203797|Q99489-2|DDO', 'nc|ENSG00000203797|Q99489-4|DDO', 'ENSG00000203797|ENST00000368924|DDO', 'nc|ENSG00000203797|Q99489-3|DDO'] 58118 8408 LERYIWDDP True NCI_RA007_Epitope_Rep5 1205.5716881284498 1205.5705899358602 39.018 2 -1.065374022291276 0.32720112002302854 1.0 ['ENSG00000166704|ENST00000551380|ZNF606'] 78627 11771 PDTTEALR True PC9_epitope_Rep1 901.4505103666099 901.44940993586 50.15 2 -1.065453295954798 0.32720992306484536 1.0 ['ENST00000575475.2_1_17:5185712-5281605:+|nuORF', 'nc|ENSG00000029725|Q15276-2|RABEP1', 'ENSG00000029725|ENST00000537505|RABEP1'] 108300 10661 TEDDIIWR True PC9_epitope_Rep5 1046.50327421546 1046.5021699358601 45.996 2 -1.0654845078662631 0.3272318099150846 1.0 ['ENSG00000065615|ENST00000369681|CYB5R4'] 127641 8123 VRDTQAVRHYK True NCI_RA007_Epitope_Rep2 1371.7371307441101 1371.7360299358602 36.23 2 -1.0655402066354496 0.3273060316629596 1.0 ['ENSG00000101213|ENST00000542869|PTK6'] 87357 14436 QTDGTLTYFDK True H1975_Epitope_Rep2 1287.5982967991097 1287.5971899358601 60.681 2 -1.0655752293078762 0.3273279166830213 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C'] 13335 5200 DMEQYMEDQYW True H1975_Epitope_Rep3 1536.5537317588 1536.55207490379 25.092 3 -1.065629550392207 0.32737596818086667 1.0 ['ENST00000557927.1_1_15:89172339-89173522:+|nuORF', 'ENSG00000181026|ENST00000332810|AEN'] 12410 7842 DKFWNFIFYKF True H1975_Epitope_Rep1 1553.7707222881697 1553.76907490379 35.114 3 -1.0657109761456551 0.3274154510368287 1.0 ['ENSG00000159461|ENST00000290649|AMFR', 'ENST00000568657.1_1_16:56442078-56458825:-|nuORF'] 49558 14050 KKIRICHIFTF True H1975_Epitope_Rep1 1404.8063966042398 1404.8052899358602 59.207 2 -1.0657226517595138 0.3274154510368287 1.0 ['nc|ENSG00000136153|Q8WWI1-3|LMO7', 'nc|ENSG00000136153|Q8WWI1-4|LMO7', 'nc|ENSG00000136153|Q8WWI1-2|LMO7', 'nc|ENSG00000136153|Q8WWI1|LMO7'] 4667 9854 ALDDRERRISH True NCI_RA007_Epitope_Rep1 1366.7065588918201 1366.70546993586 42.332 2 -1.0657247757850776 0.3274154510368287 1.0 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3', 'PARD3|p.D968Ifs*11|1|0.15|ENSG00000148498|chr10:34317279-34317279|C/-|frameshift_variant', 'nc|ENSG00000148498|Q8TEW0-9|PARD3', 'nc|ENSG00000148498|Q8TEW0-10|PARD3', 'nc|ENSG00000148498|Q8TEW0-8|PARD3', 'PARD3|p.G1039Vfs*3|1|0.31|ENSG00000148498|chr10:34284204-34284204|C/-|frameshift_variant', 'PARD3|p.I1043Nfs*29|1|0.13|ENSG00000148498|chr10:34284192-34284193|-/T|frameshift_variant'] 26912 17390 FLGLSGLVG True PC9_epitope_Rep4 861.4960040070499 861.49490993586 74.892 2 -1.065764107646782 0.3274504160343294 1.0 ['ENSG00000181333|ENST00000315765|HEPHL1'] 99326 13492 SLDPHLPLAS True PC9_epitope_Rep3 1048.5553097883198 1048.5542099358602 56.947 2 -1.0657813736418582 0.32745944531658816 1.0 ['PCDHB12|p.Q494L|1|0.24|ENSG00000120328|chr5:141210388-141210388|A/T|missense_variant'] 68178 8873 LTQEEKAA True NCI_RA007_Epitope_Rep3 888.4552613938798 888.45416993586 41.993 2 -1.0657832146627126 0.32745944531658816 1.0 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 110168 6826 TIDEVVEK True NCI_RA007_Epitope_Rep2 931.4862271689899 931.48512993586 31.166 2 -1.0657928527588179 0.32745944531658816 1.0 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 123441 20297 VIEKHVFVVE True NCI_RA007_Epitope_Rep5 1197.6757592741699 1197.67411490379 85.013 3 -1.0658027438847537 0.32745944531658816 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27', 'SENP2-ANKRD27|1|fusion'] 560 7144 AARALVNL True PC9_epitope_Rep2 826.50248636982 826.5019349679301 32.872 1 -1.065924850526465 0.32754673539069346 1.0 ['ENST00000530074.1_1_8:145192726-145193642:+|nuORF', 'ENSG00000235173|ENST00000347708|HGH1'] 74950 5945 NLTTHRRVH True H1975_Epitope_Rep3 1132.62137271588 1132.62026993586 27.878 2 -1.0659599887941986 0.3275686141126606 1.0 ['nc|ENSG00000182903|Q8TF20|ZNF721', 'ENSG00000182903|ENST00000511833|ZNF721'] 65489 6725 LSFLQKVSARP True H1975_Epitope_Rep2 1244.7241064489199 1244.72245490379 30.782 3 -1.0660101249800265 0.32756929274960433 1.0 ['nc|ENSG00000226807|Q6ZUA9|MROH5'] 128138 22219 VRRVLQIPMW True PC9_epitope_Rep6 1296.7488817281198 1296.74722490379 98.422 3 -1.06602650036511 0.32756929274960433 1.0 ['ENST00000498426.5_1_1:196286396-196434478:-|nuORF', 'nc|ENSG00000162687|Q6UVM3-4|KCNT2', 'ENST00000610076.1_1_1:196227273-196577439:-|nuORF', 'KCNT2|p.N1058Ifs*3|2|0.66|ENSG00000162687|chr1:196258232-196258232|T/-|frameshift_variant', 'nc|ENSG00000162687|Q6UVM3-3|KCNT2', 'nc|ENSG00000162687|Q6UVM3-2|KCNT2', 'ENSG00000162687|ENST00000294725|KCNT2'] 84255 8633 QEVREANKY True H1975_Epitope_Rep2 1135.5621860739097 1135.56108993586 38.163 2 -1.0660613657220657 0.32756929274960433 1.0 ['nc|ENSG00000110911|P49281-5|SLC11A2', 'ENSG00000110911|ENST00000262052|SLC11A2', 'nc|ENSG00000110911|P49281|SLC11A2', 'nc|ENSG00000110911|P49281-3|SLC11A2', 'nc|ENSG00000110911|P49281-4|SLC11A2'] 124269 10063 VLDDRSLP True PC9_epitope_Rep3 913.48689587533 913.48578993586 43.663 2 -1.0660785417407033 0.32756929274960433 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2', 'nc|ENSG00000070610|Q9HCG7-3|GBA2'] 58184 4472 LESLLSKSQ True H1975_Epitope_Rep1 1003.55497543515 1003.55386993586 22.218 2 -1.0661147300573666 0.32756929274960433 1.0 ['ENSG00000136026|ENST00000378026|CKAP4'] 67577 6172 LTESHQHL True NCI_RA007_Epitope_Rep5 963.47739382079 963.47628993586 30.42 2 -1.066117753518465 0.32756929274960433 1.0 ['CHD5|p.A1836T|1|0.61|ENSG00000116254|chr1:6109867-6109867|C/T|missense_variant'] 13041 5628 DLQWLKIII True NCI_RA007_Epitope_Rep5 1140.69068106232 1140.6890249037901 28.336 3 -1.066128546854334 0.32756929274960433 1.0 ['SLC22A2|p.P425L|1|0.39|ENSG00000112499|chr6:160243577-160243577|G/A|missense_variant', 'ENST00000486916.5_1_6:160592405-160666544:-|nuORF', 'ENSG00000112499|ENST00000366953|SLC22A2'] 130855 6673 VVGGDGRF True H1975_Epitope_Rep3 805.40825163181 805.40714993586 30.622 2 -1.0661426683552435 0.32756929274960433 1.0 ['ENSG00000079739|ENST00000371084|PGM1'] 119063 7671 VEHEAVAE True H1975_Epitope_Rep3 882.4083112014598 882.40720993586 34.489 2 -1.0661532772657185 0.32756929274960433 1.0 ['ENST00000481284.5_1_20:33462930-33515014:+|nuORF', 'ENSG00000131069|ENST00000360596|ACSS2', 'nc|ENSG00000131069|Q9NR19-2|ACSS2'] 86885 18548 QRRQQKIQG True NCI_RA007_Epitope_Rep4 1140.6475874637197 1140.64594490379 80.254 3 -1.0661603607480934 0.32757808821221157 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-4|USP16'] 137932 8209 YPSICKGGK True PC9_epitope_Rep1 951.4847877003499 951.48368993586 36.408 2 -1.0661668540036067 0.3275999633761919 1.0 ['ENSG00000112293|ENST00000230036|GPLD1', 'nc|ENSG00000112293|P80108-2|GPLD1', 'ENST00000378243.8_1_6:24473808-24489784:-|nuORF', 'GPLD1|p.G220Vfs*4|1|0.21|ENSG00000112293|chr6:24466934-24466934|C/-|frameshift_variant'] 98340 10440 SIGRLIGI True PC9_epitope_Rep4 827.5228874612299 827.5217899358599 47.869 2 -1.0662018761643777 0.3276001883436225 1.0 ['nc|ENSG00000114859|P51788-4|CLCN2', 'nc|ENSG00000114859|P51788-3|CLCN2', 'ENSG00000114859|ENST00000265593|CLCN2'] 32322 6237 GFYLHRGRCFD True PC9_epitope_Rep5 1369.6349741746897 1369.63333490379 28.97 3 -1.0662383120509622 0.3276001883436225 1.0 ['ENSG00000147655|ENST00000276659|RSPO2', 'nc|ENSG00000147655|Q6UXX9-2|RSPO2', 'nc|ENSG00000147655|Q6UXX9-3|RSPO2'] 53378 19174 KTYLYWYLQK True NCI_RA007_Epitope_Rep3 1404.7441731871597 1404.7425149037902 83.72 3 -1.0662649405269553 0.3276001883436225 1.0 ['nc|ENSG00000243264|A0A075B6S2|IGKV2D-29', 'ENST00000521304.1_1_2:89533689-89534392:-|nuORF', 'nc|ENSG00000253998|A2NJV5|IGKV2-29'] 15815 6960 EDISTEDGDRL True H1975_Epitope_Rep1 1248.54698950224 1248.54588993586 31.811 2 -1.0663262204391666 0.3276089828269485 1.0 ['ENSG00000086827|ENST00000200135|ZW10'] 46356 16865 ITGVIGLNVV True PC9_epitope_Rep1 983.60153170475 983.60042993586 69.696 2 -1.0663635315170263 0.3276308561563211 1.0 ['ENSG00000006283|ENST00000359106|CACNA1G', 'nc|ENSG00000006283|O43497-20|CACNA1G', 'nc|ENSG00000006283|O43497-4|CACNA1G', 'nc|ENSG00000006283|O43497-33|CACNA1G', 'nc|ENSG00000006283|O43497-12|CACNA1G', 'nc|ENSG00000006283|O43497-7|CACNA1G', 'nc|ENSG00000006283|O43497-16|CACNA1G', 'nc|ENSG00000006283|O43497-8|CACNA1G', 'nc|ENSG00000006283|O43497-25|CACNA1G', 'nc|ENSG00000006283|O43497-17|CACNA1G', 'nc|ENSG00000006283|O43497-13|CACNA1G', 'nc|ENSG00000006283|O43497-6|CACNA1G', 'nc|ENSG00000006283|O43497-9|CACNA1G', 'nc|ENSG00000006283|O43497-11|CACNA1G', 'nc|ENSG00000006283|O43497-21|CACNA1G', 'nc|ENSG00000006283|O43497-15|CACNA1G', 'nc|ENSG00000006283|O43497-10|CACNA1G', 'nc|ENSG00000006283|O43497-34|CACNA1G', 'nc|ENSG00000006283|O43497-22|CACNA1G', 'nc|ENSG00000006283|O43497-24|CACNA1G', 'nc|ENSG00000006283|O43497-35|CACNA1G', 'nc|ENSG00000006283|O43497-36|CACNA1G', 'nc|ENSG00000006283|O43497-3|CACNA1G', 'nc|ENSG00000006283|O43497-26|CACNA1G', 'nc|ENSG00000006283|O43497-23|CACNA1G', 'nc|ENSG00000006283|O43497-18|CACNA1G', 'nc|ENSG00000006283|O43497-2|CACNA1G', 'nc|ENSG00000006283|O43497-19|CACNA1G', 'nc|ENSG00000006283|O43497-5|CACNA1G', 'nc|ENSG00000006283|O43497-30|CACNA1G', 'nc|ENSG00000006283|O43497-29|CACNA1G', 'nc|ENSG00000006283|O43497-28|CACNA1G', 'nc|ENSG00000006283|O43497-32|CACNA1G', 'nc|ENSG00000006283|O43497-31|CACNA1G', 'nc|ENSG00000006283|O43497-27|CACNA1G'] 95956 4167 SDYSLICWHHI True NCI_RA007_Epitope_Rep2 1372.62340643148 1372.6223099358601 20.848 2 -1.066413154663474 0.3276658078185694 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4'] 3538 4780 AGLYELDGQLG True PC9_epitope_Rep4 1134.5557037111398 1134.55405490379 24.958 3 -1.066448554668624 0.3276876798325922 1.0 ['ENSG00000178971|ENST00000651323|CTC1', 'nc|ENSG00000178971|Q2NKJ3-2|CTC1'] 35057 3942 GRFFHRERK True NCI_RA007_Epitope_Rep1 1231.6686572614697 1231.66702490379 19.368 3 -1.0665337727741055 0.327735708400361 1.0 ['AKAP3|p.P262H|1|0.15|ENSG00000111254|chr12:4628117-4628117|G/T|missense_variant'] 9153 7860 AVMVLMAP True PC9_epitope_Rep1 830.4394177310598 830.43832993586 35.06 2 -1.0665432260547043 0.3277402142212573 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9'] 4218 8739 AIDTSNLEKPL True NCI_RA007_Epitope_Rep2 1199.63976768827 1199.6386699358602 38.639 2 -1.0665608863275422 0.3277402142212573 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.A1416Pfs*6|1|0.33|ENSG00000047936|chr6:117353065-117353065|C/-|frameshift_variant'] 131807 12610 VYAPALAL True NCI_RA007_Epitope_Rep3 816.47454028648 816.47344993586 56.846 2 -1.0666396960329876 0.32779703132151966 1.0 ['ENSG00000148942|ENST00000396005|SLC5A12', 'nc|ENSG00000148942|Q1EHB4-2|SLC5A12', 'SLC5A12|p.C266*|2|0.17|ENSG00000148942|chr11:26703554-26703554|G/-|frameshift_variant'] 25128 22354 FDPALLEFLV True PC9_epitope_Rep4 1162.62741209942 1162.62577490379 94.221 3 -1.0666690080643526 0.32779703132151966 1.0 ['ENSG00000145337|ENST00000273968|PYURF'] 121056 16353 VGFQKNLL True PC9_epitope_Rep5 917.5334521449298 917.53234993586 67.899 2 -1.0666923138416373 0.3277974657059539 1.0 ['ENST00000432587.6_1_1:168014203-168014425:+|nuORF'] 55869 9665 LDFPVRDEKEP True H1975_Epitope_Rep3 1343.67213044571 1343.6710299358601 42.195 2 -1.0667026111915447 0.3277974657059539 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2'] 4346 13131 AINTENIRL True PC9_epitope_Rep6 1042.57710786206 1042.5760099358602 62.141 2 -1.0667150444875009 0.3277974657059539 1.0 ['nc|ENSG00000120063|Q14344-2|GNA13', 'ENSG00000120063|ENST00000439174|GNA13'] 109183 6820 TFRRMWKWLQE True H1975_Epitope_Rep1 1579.8081875093897 1579.8065549037901 31.275 3 -1.0667152042016013 0.3277974657059539 1.0 ['ENSG00000205922|ENST00000382349|ONECUT3', 'ENSG00000119547|ENST00000491143|ONECUT2', 'ENSG00000169856|ENST00000305901|ONECUT1'] 84988 7462 QIEAVLLNS True PC9_epitope_Rep3 985.54441075145 985.54330993586 33.706 2 -1.0667378320786278 0.3277974657059539 1.0 ['GCN1L1-CCND2|1|fusion', 'ENSG00000118971|ENST00000261254|CCND2'] 30174 6469 FYTIFRFFEQR True H1975_Epitope_Rep1 1552.7826839541997 1552.7815899358602 29.945 2 -1.0667415096305315 0.3277974657059539 1.0 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 55259 9818 LAQLLARSPP True H1975_Epitope_Rep1 1064.63422881536 1064.63312993586 42.693 2 -1.066840956385058 0.3278281223438338 1.0 ['nc|ENSG00000100842|O43281-3|EFS', 'nc|ENSG00000100842|O43281-2|EFS', 'ENSG00000100842|ENST00000216733|EFS'] 136799 19357 YISRPLSHCLH True PC9_epitope_Rep6 1324.6710253302401 1324.6699299358602 87.105 2 -1.0668635273346807 0.3278281223438338 1.0 ['ENST00000501122.2_1_11:65193981-65194080:+|nuORF'] 140175 19220 YVTLHVSEVP True PC9_epitope_Rep3 1142.5971746003 1142.5960699358602 79.15 2 -1.0669137374956426 0.3278457012095456 1.0 ['ENSG00000167721|ENST00000301364|TSR1'] 67454 14591 LTEDVKEGSL True PC9_epitope_Rep1 1089.55536935797 1089.55426993586 60.948 2 -1.0669238936712147 0.3278457012095456 1.0 ['RYR2|p.A1798D|1|0.31|ENSG00000198626|chr1:237614521-237614521|C/A|missense_variant'] 123003 21198 VGWSLLCK True PC9_epitope_Rep6 904.4840594243599 904.4835149679301 94.386 1 -1.0669460755984541 0.3278544902976097 1.0 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.F1306Ifs*2|1|0.33|ENSG00000188906|chr12:40305920-40305932|AACTTTGATTTTA/-|frameshift_variant', 'LRRK2|p.L498Ffs*32|1|0.15|ENSG00000188906|chr12:40259552-40259553|-/T|frameshift_variant', 'ENST00000474202.1_1_12:40619397-40626186:+|nuORF'] 12019 8561 DIDAPVTAA True H1975_Epitope_Rep1 871.4287122928699 871.42816496793 37.856 1 -1.0670050492467171 0.3278851434399435 1.0 ['nc|ENSG00000138814|Q08209-4|PPP3CA'] 46143 12508 ITARRQHLK True H1975_Epitope_Rep1 1121.6781593160101 1121.6770699358601 53.153 2 -1.0670090911759207 0.3278851434399435 1.0 ['ENST00000468473.1_1_11:1861614-1861937:+|nuORF', 'nc|ENSG00000130598|P48788-2|TNNI2', 'ENSG00000130598|ENST00000381911|TNNI2'] 62687 14342 LLWMLLLVP True PC9_epitope_Rep1 1096.67186019404 1096.67076993586 59.99 2 -1.067030745418943 0.32789393166751657 1.0 ['ENSG00000188501|ENST00000695545|LCTL'] 12934 5889 DLNPEQGHTVY True H1975_Epitope_Rep1 1271.57823006087 1271.57712993586 27.722 2 -1.0671102209186862 0.32794194560669454 1.0 ['NPR1|p.D688N|1|0.48|ENSG00000169418|chr1:153687326-153687326|G/A|missense_variant'] 17389 9252 EHFINHLT True PC9_epitope_Rep2 1009.49812926537 1009.49702993586 40.926 2 -1.0671774678837993 0.3279768831474484 1.0 ['ENST00000503202.1_1_4:83323057-83323543:-|nuORF'] 107680 24027 TAKPQYLE True PC9_epitope_Rep2 948.4916469025999 948.49054993586 97.916 2 -1.0671875805040045 0.32799016787824903 1.0 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1'] 235 18540 AAGAPNLVLAA True PC9_epitope_Rep4 966.5498304850599 966.54928496793 79.389 1 -1.0672070893764178 0.32799016787824903 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 137901 7282 YPNSGSVSA True PC9_epitope_Rep5 880.39266113732 880.3921149679301 32.974 1 -1.067214425913752 0.32799016787824903 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 97426 14681 SGGGGFCD True NCI_RA007_Epitope_Rep5 698.23298969178 698.2324449679301 63.14 1 -1.067300105981585 0.32802959980127344 1.0 ['nc|ENSG00000024048|Q8IWV8|UBR2', 'ENSG00000024048|ENST00000372901|UBR2', 'nc|ENSG00000024048|Q8IWV8-2|UBR2'] 91507 24258 RPAAAAAAAAA True PC9_epitope_Rep1 910.4984636185399 910.49736993586 98.128 2 -1.0673054426802135 0.32802959980127344 1.0 ['ENST00000423059.8_2_7:11676563-11871669:-|nuORF', 'ENST00000607532.5_1_6:13328532-13328775:-|nuORF', 'ENST00000607230.1_1_6:13327129-13328784:-|nuORF'] 43796 7146 IKHEHKSEK True NCI_RA007_Epitope_Rep4 1134.61455599994 1134.6129149037902 34.108 3 -1.0673057569035678 0.32802959980127344 1.0 ['nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENSG00000101745|ENST00000262126|ANKRD12'] 100624 12438 SLQPQQQQQR True H1975_Epitope_Rep3 1239.63199696923 1239.63088993586 53.034 2 -1.0673262315547396 0.32805145905240035 1.0 ['nc|ENSG00000139597|Q5TBK1-2|N4BP2L1', 'ENSG00000139597|ENST00000380130|N4BP2L1'] 111224 15275 TLGDLFAGGFP True PC9_epitope_Rep1 1093.54441075145 1093.5433099358602 63.576 2 -1.067346136818581 0.32806024395664735 1.0 ['ENSG00000122574|ENST00000242140|WIPF3'] 59407 5887 LGLRKYWDYRC True PC9_epitope_Rep1 1471.73943924323 1471.73779490379 27.461 3 -1.0673940723085291 0.32806902863119364 1.0 ['AluJr_dup44423|chrX:77901730-77902035:-|1.0948627566623994|0.1951206886456881|2.49|502.0|19|1|anti-sense'] 21773 17409 ESDFQLLEIAR True H1975_Epitope_Rep1 1319.67213044571 1319.6710299358601 72.44 2 -1.0674146708487764 0.328090886509524 1.0 ['ENSG00000152767|ENST00000319562|FARP1', 'nc|ENSG00000152767|Q9Y4F1-2|FARP1', 'KIAA0247-FARP1|1|fusion'] 112800 20765 TPLRINTGV True PC9_epitope_Rep2 969.5607295219299 969.55962993586 85.315 2 -1.0674330192592905 0.3280996705537834 1.0 ['CA10|p.G91V|1|0.14|ENSG00000154975|chr17:51930997-51930997|C/A|missense_variant'] 17989 11836 EIGVQNVKGIH True PC9_epitope_Rep5 1192.65642081192 1192.6553299358602 50.524 2 -1.0674948104106121 0.3281084543683736 1.0 ['ENSG00000188342|ENST00000340473|GTF2F2'] 36498 5513 GVKGAKIK True NCI_RA007_Epitope_Rep5 799.5279728416699 799.52686993586 27.894 2 -1.067531657669526 0.32813909405843517 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 35693 8707 GTPSDTQELR True PC9_epitope_Rep6 1102.5254662120199 1102.52436993586 43.348 2 -1.0675430613283778 0.32813909405843517 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 56267 20849 LDQHQGSQETL True PC9_epitope_Rep5 1254.5840437173 1254.5829499358601 85.245 2 -1.0676283319936906 0.32820894937056355 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.G158Sfs*29|1|0.37|ENSG00000081248|chr1:201092040-201092042|CCG/AA|frameshift_variant'] 96816 6163 SESFRGFQQK True H1975_Epitope_Rep3 1212.58873517492 1212.5876299358601 28.718 2 -1.0676553022282544 0.32820894937056355 1.0 ['ENST00000311637.9_2_20:50215600-50215741:-|nuORF'] 71223 12316 MFVFKERWFWR True H1975_Epitope_Rep1 1630.8231092975398 1630.82200993586 52.401 2 -1.0677330517870103 0.32820915032679737 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 75076 716 NMQKARELWD True NCI_RA007_Epitope_Rep1 1289.61865540421 1289.61700490379 3.7846 3 -1.0677365183393166 0.32820915032679737 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 74649 21744 NLFMRNSL True PC9_epitope_Rep1 993.50658577409 993.5054899358599 88.471 2 -1.0677440537769756 0.32820915032679737 1.0 ['ENST00000418103.1_1_21:42742479-42748816:+|nuORF'] 135863 4674 YEREFPEETE True NCI_RA007_Epitope_Rep5 1327.5568259099498 1327.5557299358602 24.661 2 -1.0677693503532228 0.32822242265009216 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.G158Sfs*29|1|0.37|ENSG00000081248|chr1:201092040-201092042|CCG/AA|frameshift_variant'] 30411 17242 GAFLVIPLHQ True H1975_Epitope_Rep3 1093.62841515893 1093.62787496793 71.963 1 -1.0677756948373482 0.32822242265009216 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 2577 8657 AESAAYFDY True H1975_Epitope_Rep2 1035.4185415319898 1035.41744993586 38.258 2 -1.0677801289479725 0.32822242265009216 1.0 ['ENSG00000131507|ENST00000253814|NDFIP1', 'nc|ENSG00000131507|Q9BT67-2|NDFIP1'] 90104 15931 RGRGKGPA True NCI_RA007_Epitope_Rep4 797.4620185401699 797.46147496793 69.147 1 -1.0678750916339868 0.3282661263969675 1.0 ['ENSG00000117318|ENST00000374561|ID3'] 75961 21008 NRGLIRRPK True PC9_epitope_Rep6 1108.69414373332 1108.69304993586 93.632 2 -1.0678884909830464 0.3282661263969675 1.0 ['ENST00000396757.5_1_9:35615990-35616170:-|nuORF'] 98225 6853 SIEGSETTTVS True H1975_Epitope_Rep2 1109.50881308837 1109.50770993586 31.278 2 -1.0679006432710625 0.32826632509018666 1.0 ['ENSG00000261272|ENST00000561890|MUC22'] 44423 14947 INHQRIHRGER True PC9_epitope_Rep4 1414.7654111806198 1414.7637749037901 65.434 3 -1.067959424760492 0.32826632509018666 1.0 ['ENSG00000102870|ENST00000262525|ZNF629'] 83616 8807 QDVIPDSQAA True NCI_RA007_Epitope_Rep1 1042.49310345458 1042.4925749679298 38.259 1 -1.0679703382771317 0.32826632509018666 1.0 ['ENSG00000196074|ENST00000357552|SYCP2'] 16517 4783 EEPDPFYYDYN True NCI_RA007_Epitope_Rep1 1450.55649155678 1450.5553899358601 22.685 2 -1.068111772978741 0.3283143159628279 1.0 ['ENSG00000221946|ENST00000270310|FXYD7'] 130400 4200 VTVPPDVFF True NCI_RA007_Epitope_Rep5 1019.53278343859 1019.53168993586 22.687 2 -1.0681824526381882 0.32834923539406613 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 27547 25585 FPKFLLLLC True PC9_epitope_Rep1 1092.64056006576 1092.63997496793 103.43 1 -1.0682017873617307 0.32835801388035707 1.0 ['ENST00000333751.4_1_17:7256103-7256196:+|nuORF'] 61434 9710 LLETGDLRWP True PC9_epitope_Rep2 1198.6346227381798 1198.63352993586 42.687 2 -1.0682340393363883 0.3283667921371811 1.0 ['ENST00000382911.8_2_18:51884960-51885041:+|nuORF'] 20069 12710 ENFILYEEIGR True NCI_RA007_Epitope_Rep2 1381.6877805098497 1381.6866899358602 54.057 2 -1.0682515678316806 0.3283976109884078 1.0 ['ENSG00000168038|ENST00000301831|ULK4', 'ENST00000460978.1_1_3:41979458-41996251:-|nuORF', 'ENST00000497684.1_1_3:41973315-41996251:-|nuORF'] 134714 7107 WWRRRWTRSQW True NCI_RA007_Epitope_Rep2 1702.8705449554998 1702.86944993586 32.264 2 -1.0682545003655806 0.3283976109884078 1.0 ['ENST00000554052.2_2_14:35515721-35519263:+|nuORF', 'ENST00000280987.8_1_14:35515634-35522487:+|nuORF'] 121981 13339 VGQAGRTA True NCI_RA007_Epitope_Rep4 758.4035006045399 758.4029549679301 58.46 1 -1.0682763599238405 0.3283976109884078 1.0 ['ENST00000530353.1_1_8:145980398-145981007:-|nuORF'] 90304 16717 RHWQWWRLFTK True NCI_RA007_Epitope_Rep2 1642.8633343167396 1642.8622299358601 69.758 2 -1.068277656025634 0.3283976109884078 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14'] 128637 8839 VSLHKQEL True PC9_epitope_Rep6 952.53418042092 952.53308993586 43.931 2 -1.068300394741807 0.3283976109884078 1.0 ['ENST00000519685.5_1_8:22865572-22868139:+|nuORF'] 137707 12892 YMPPAHRNF True PC9_epitope_Rep6 1131.52838384783 1131.5272899358602 61.117 2 -1.0683471458536253 0.3284063880394156 1.0 ['ENSG00000131203|ENST00000518237|IDO1'] 72385 22020 MTEETRIVYWI True PC9_epitope_Rep6 1439.7118870827098 1439.7102449037902 97.623 3 -1.068376086324603 0.32842823351063133 1.0 ['ENST00000453574.1_1_X:100673300-100674112:+|nuORF'] 60461 10322 LILKRCGSLC True H1975_Epitope_Rep1 1104.61475632408 1104.6136499358602 44.651 2 -1.0684708558264118 0.3284502698535081 1.0 ['ENST00000579695.5_1_17:38077365-38077797:-|nuORF'] 58532 23755 LFCFLFFPRQV True NCI_RA007_Epitope_Rep2 1415.74239936535 1415.74130993586 99.694 2 -1.0684819576002544 0.3284502698535081 1.0 ['chr17:45630606-45636283|175|10.23|0.0|19.96|+|2|TE_info:AluSz6,AluSz6_dup41014,Alu,SINE,donor,-,45630452,45630606|None,LINC02210|1'] 122479 18621 VGSPVRQRRS True NCI_RA007_Epitope_Rep5 1140.64758746372 1140.64707496793 78.44 1 -1.0684999143951779 0.3284502698535081 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 2050 11570 AELEQRPQP True PC9_epitope_Rep1 1066.5407223533398 1066.5396299358601 49.383 2 -1.068535757605695 0.3284502698535081 1.0 ['CERS6-NOSTRIN|3|fusion', 'CERS6-NOSTRIN|1|fusion', 'CERS6-NOSTRIN|2|fusion', 'ENST00000472260.1_1_2:169713171-169721477:+|nuORF', 'nc|ENSG00000163072|Q8IVI9-3|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-2|NOSTRIN', 'ENSG00000163072|ENST00000317647|NOSTRIN', 'nc|ENSG00000163072|Q8IVI9-4|NOSTRIN'] 125668 19518 VMRKKLILFF True NCI_RA007_Epitope_Rep5 1293.79952031865 1293.79786490379 81.962 3 -1.0685913858259934 0.3284547533485789 1.0 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'nc|ENSG00000141027|O75376-3|NCOR1'] 55906 5627 LDGMWTTP True PC9_epitope_Rep1 919.41095405375 919.40984993586 26.471 2 -1.0685964209126488 0.3284547533485789 1.0 ['ENSG00000143278|ENST00000367412|F13B'] 17374 4875 EHESPVLR True H1975_Epitope_Rep3 965.4930438849299 965.49194993586 23.877 2 -1.068689993283473 0.32847230389274373 1.0 ['ENST00000412433.5_1_22:45181943-45197960:+|nuORF'] 59542 8582 LGQPYFEAFK True H1975_Epitope_Rep1 1198.60225998074 1198.60116993586 37.937 2 -1.0686995304203897 0.32847230389274373 1.0 ['NEPRO|p.I276Ffs*5|1|0.24|ENSG00000163608|chr3:113011132-113011133|TT/-|frameshift_variant', 'nc|ENSG00000163608|Q6NW34-2|NEPRO', 'ENSG00000163608|ENST00000314400|NEPRO', 'ENST00000472637.5_1_3:112724385-112732818:-|nuORF'] 93818 21232 RVCPQGEG True H1975_Epitope_Rep2 844.3861362882399 844.38502993586 87.873 2 -1.0687270319092184 0.32850721304620534 1.0 ['ENST00000547085.1_1_12:112600816-112607652:-|nuORF'] 63160 11334 LNSHCMDHT True H1975_Epitope_Rep1 1056.41169941308 1056.41060993586 48.575 2 -1.0687664375506065 0.32855089507382723 1.0 ['ENSG00000186026|ENST00000421176|ZNF284'] 69784 8376 LWRIRWEELQF True NCI_RA007_Epitope_Rep2 1574.8357821562197 1574.83414490379 37.221 3 -1.0687727239188316 0.32855089507382723 1.0 ['nc|ENSG00000159899|P20594-2|NPR2', 'ENSG00000159899|ENST00000342694|NPR2'] 88273 9349 QYGEHFRIRQN True H1975_Epitope_Rep2 1446.71164427226 1446.70999490379 40.922 3 -1.0687842107472063 0.32855966863101227 1.0 ['ENSG00000124103|ENST00000371328|FAM209A'] 83127 15020 PYPTYPASAS True PC9_epitope_Rep3 1052.48147614172 1052.4803699358602 62.901 2 -1.068804108832476 0.3285945748183766 1.0 ['ENST00000537971.5_1_12:3392287-3392575:+|nuORF'] 66073 8326 LSNKKERGP True PC9_epitope_Rep3 1027.5774422152297 1027.5763499358602 36.998 2 -1.0689433538830593 0.32860334757555565 1.0 ['nc|ENSG00000137757|P51878-4|CASP5'] 58394 11930 LEVNQQSL True NCI_RA007_Epitope_Rep3 929.4818104948899 929.48070993586 54.055 2 -1.069013101067185 0.32864702423727704 1.0 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 137424 23711 YLLVKITRLG True NCI_RA007_Epitope_Rep4 1174.74377926434 1174.7426899358602 102.82 2 -1.0690308415925927 0.32864702423727704 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 41899 4968 IDYFFFFKQQK True NCI_RA007_Epitope_Rep4 1509.7656369077297 1509.76399490379 25.579 3 -1.0690415919149054 0.32866886171213544 1.0 ['ENST00000246949.9_1_16:3704910-3705863:+|nuORF', 'ENST00000571460.5_1_16:3704910-3712757:+|nuORF'] 91638 20159 RPFNLKFY True PC9_epitope_Rep3 1083.58655034695 1083.5854499358602 82.796 2 -1.0690521378796853 0.3286776330402289 1.0 ['ENSG00000153976|ENST00000284110|HS3ST3A1', 'ENSG00000125430|ENST00000360954|HS3ST3B1'] 5289 8264 ALRQNFWKEEY True NCI_RA007_Epitope_Rep2 1482.7255630009 1482.72391490379 36.783 3 -1.0690799825758943 0.32873437071296985 1.0 ['ENSG00000272899|ENST00000609480|ATP6V1FNB'] 29433 11732 FVGRLYQVEY True H1975_Epitope_Rep1 1272.65027280232 1272.64916993586 50.119 2 -1.0690800549484039 0.32873437071296985 1.0 ['ENST00000560033.5_1_15:78834730-78834988:+|nuORF'] 24032 17998 EYQCQNLYQL True PC9_epitope_Rep5 1300.57578753272 1300.57468993586 74.247 2 -1.0691022469198372 0.32873884584732366 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'nc|ENSG00000080910|P36980-2|CFHR2', 'ENSG00000080910|ENST00000367415|CFHR2', 'ENSG00000244414|ENST00000320493|CFHR1', 'CFHR2|p.E185Q|1|0.39|ENSG00000080910|chr1:196958013-196958013|G/C|missense_variant'] 134476 22790 WTRRRRRQPRR True PC9_epitope_Rep1 1622.9566746212997 1622.95556993586 92.473 2 -1.0691101846039663 0.32873884584732366 1.0 ['ENST00000588173.1_1_19:13264262-13264382:+|nuORF'] 118873 21525 VEELRRRRR True PC9_epitope_Rep1 1268.75378386776 1268.7526899358602 87.628 2 -1.0691378142176666 0.32874761568811894 1.0 ['ENSG00000113119|ENST00000394671|TMCO6', 'nc|ENSG00000113119|Q96DC7-2|TMCO6', 'ENST00000514449.5_1_5:140019112-140019241:+|nuORF', 'ENST00000511410.5_1_5:140019112-140021405:+|nuORF'] 21360 7035 ERLQELYSEQK True NCI_RA007_Epitope_Rep2 1421.7150578868498 1421.7134249037902 31.988 3 -1.069144024735267 0.3287477954144621 1.0 ['ENSG00000144824|ENST00000431670|PHLDB2'] 128769 6167 VSQQLPWLFEK True PC9_epitope_Rep4 1373.73433677945 1373.73268490379 30.751 3 -1.0691441158199804 0.3287477954144621 1.0 ['ENSG00000135763|ENST00000258243|URB2'] 19191 12908 ELKKRNPEVRH True H1975_Epitope_Rep1 1404.7949799734 1404.79388993586 54.724 2 -1.0691979141653862 0.3287477954144621 1.0 ['ENSG00000014824|ENST00000264451|SLC30A9', 'ENST00000505523.1_1_4:42072209-42088140:+|nuORF'] 44398 11721 INEPTVAAIV True PC9_epitope_Rep4 1025.5757108797297 1025.57460993586 52.846 2 -1.0692549937109272 0.3287957567998328 1.0 ['ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 27797 14337 FQEHQFEAL True PC9_epitope_Rep6 1147.52982331647 1147.5287299358602 67.045 2 -1.0692882761270979 0.32880452532431054 1.0 ['nc|ENSG00000122986|Q96D96-2|HVCN1', 'nc|ENSG00000122986|Q96D96-4|HVCN1', 'nc|ENSG00000122986|Q96D96-3|HVCN1', 'ENSG00000122986|ENST00000242607|HVCN1'] 72974 20251 NCSGGDDD True NCI_RA007_Epitope_Rep5 781.21846182645 781.21791496793 84.836 1 -1.0693447621056977 0.32881776616590463 1.0 ['ENSG00000161011|ENST00000389805|SQSTM1', 'nc|ENSG00000161011|Q13501-2|SQSTM1'] 86725 19158 QRKMRYWLL True NCI_RA007_Epitope_Rep4 1292.7175815998398 1292.7164899358602 82.839 2 -1.069345516190546 0.32881776616590463 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF', 'COL14A1|p.W717*|1|0.21|ENSG00000187955|chr8:120228722-120228722|G/-|frameshift_variant'] 39637 11238 HPPQHQHHH True PC9_epitope_Rep4 1153.5278066842102 1153.52617490379 51.002 3 -1.0693539118647117 0.32881776616590463 1.0 ['ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 9618 13660 AYFGFSVAATD True PC9_epitope_Rep5 1147.51858992643 1147.5169349037901 57.566 3 -1.0693799832653517 0.3288657235045917 1.0 ['nc|ENSG00000138448|P06756-3|ITGAV', 'nc|ENSG00000138448|P06756-2|ITGAV', 'ENSG00000138448|ENST00000261023|ITGAV', 'ITGAV-FARP2|3|fusion', 'ITGAV-FARP2|1|fusion', 'ITGAV-FARP2|2|fusion'] 48503 8847 KEFLHFLTDQF True H1975_Epitope_Rep1 1423.7136013348697 1423.71250993586 38.952 2 -1.0694625011612404 0.3288705442861061 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'LY75|p.E1442Kfs*4|1|0.35|ENSG00000054219|chr2:159816862-159816862|C/-|frameshift_variant', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF'] 116523 10093 TYEAAQTVKG True NCI_RA007_Epitope_Rep5 1066.5294889633 1066.52838993586 45.459 2 -1.0694705244487457 0.3288705442861061 1.0 ['nc|ENSG00000159023|P11171-4|EPB41'] 133468 17826 WGPFQRLIF True NCI_RA007_Epitope_Rep3 1162.6287495120998 1162.62764993586 78.162 2 -1.069485982913482 0.3288705442861061 1.0 ['ENSG00000197375|ENST00000245407|SLC22A5', 'nc|ENSG00000197375|O76082-3|SLC22A5', 'ENSG00000197208|ENST00000200652|SLC22A4'] 59303 7836 LGHIIQGP True PC9_epitope_Rep2 833.47593726881 833.47484993586 35.512 2 -1.0695270053480186 0.3288705442861061 1.0 ['ENST00000380605.2_1_20:2778662-2778698:-|nuORF'] 98441 23303 SIITYKLLTKK True PC9_epitope_Rep6 1306.8224235078599 1306.8213299358601 102.74 2 -1.0695823018374357 0.3288705442861061 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 29809 5964 FVTSRQDGHPL True NCI_RA007_Epitope_Rep4 1255.6309343400699 1255.62982993586 29.559 2 -1.0695855971064452 0.3288705442861061 1.0 ['ENST00000521182.5_1_8:144099987-144102784:+|nuORF'] 128162 25517 VRSKGRKF True PC9_epitope_Rep5 976.5930327097199 976.5924849679301 103.41 1 -1.0696107828664196 0.3288705442861061 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 16323 9032 EEKAALEEY True H1975_Epitope_Rep2 1080.4975201286798 1080.4969749679299 39.693 1 -1.069613050498406 0.3288705442861061 1.0 ['ENSG00000142621|ENST00000688493|FHAD1'] 20386 21648 EPKRTTVMSA True PC9_epitope_Rep1 1118.5753936099 1118.5742899358602 88.097 2 -1.0696397462222196 0.3288793103448276 1.0 ['ENST00000307746.8_1_4:5016818-5016872:-|nuORF'] 85637 11635 QLPWWQWLKWR True NCI_RA007_Epitope_Rep2 1625.86193733441 1625.8608499358602 49.85 2 -1.0696683609785251 0.32890113765494183 1.0 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 9503 6171 AWFWNERFWLP True PC9_epitope_Rep6 1550.7459045226599 1550.7442649037903 32.178 3 -1.06969074034997 0.3289099030850814 1.0 ['CERS6-NOSTRIN|3|fusion', 'CERS6-NOSTRIN|1|fusion', 'CERS6-NOSTRIN|2|fusion', 'CERS6-G6PC2|1|fusion', 'ENSG00000172292|ENST00000305747|CERS6', 'nc|ENSG00000172292|Q6ZMG9-2|CERS6'] 121358 24601 VGHSAGHP True NCI_RA007_Epitope_Rep1 760.36163579256 760.36052993586 101.89 2 -1.0696956273917229 0.32891866828624794 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 135739 5724 YEKLLQSEN True NCI_RA007_Epitope_Rep3 1122.5557037111398 1122.55405490379 29.491 3 -1.0697277563124075 0.32895355519565334 1.0 ['ENSG00000102547|ENST00000409308|CAB39L'] 139574 14477 YTNQRDLDL True PC9_epitope_Rep4 1136.5462016565998 1136.5451099358602 63.596 2 -1.069796204574101 0.3290276235878012 1.0 ['ENST00000331728.8_2_22:31674601-31674808:+|nuORF'] 127687 16483 VRGGVGGGLIG True NCI_RA007_Epitope_Rep5 940.5454138109598 940.54430993586 70.161 2 -1.0698343274101816 0.3290494475354596 1.0 ['ENST00000566392.5_1_16:67336668-67360655:-|nuORF'] 126427 4649 VPLLVKVIKC True PC9_epitope_Rep2 1110.71987301562 1110.71876993586 23.255 2 -1.0698790186005733 0.32905391286176994 1.0 ['ENSG00000137040|ENST00000259569|RANBP6'] 131418 24081 VVTLLSNY True PC9_epitope_Rep3 907.50148331031 907.50038993586 97.913 2 -1.069881423346506 0.32905391286176994 1.0 ['ENST00000515049.1_1_17:48016676-48017012:+|nuORF'] 19286 9216 ELLRPELDP True H1975_Epitope_Rep1 1080.58152453616 1080.5804299358601 40.358 2 -1.0699157619572228 0.3290626754953049 1.0 ['nc|ENSG00000136826|O43474-4|KLF4', 'ENST00000497048.5_1_9:110248034-110250560:-|nuORF', 'ENSG00000136826|ENST00000374672|KLF4', 'nc|ENSG00000136826|O43474|KLF4'] 46028 6921 ISVLEGVP True NCI_RA007_Epitope_Rep1 812.4643695255999 812.46326993586 30.925 2 -1.0699552190867183 0.32907160487378057 1.0 ['ENSG00000164062|ENST00000296456|APEH'] 82509 13134 PVETFLEF True PC9_epitope_Rep3 980.4854988929999 980.48440993586 55.545 2 -1.0699840265402945 0.32907160487378057 1.0 ['UBR4|p.S5156L|1|0.3|ENSG00000127481|chr1:19076760-19076760|G/A|missense_variant'] 67922 10292 LTLELEILENP True H1975_Epitope_Rep1 1282.7020335916598 1282.7009299358601 44.532 2 -1.0699906131467432 0.32907160487378057 1.0 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-2|EIF4G3'] 122658 4590 VGTPSQGPFLR True NCI_RA007_Epitope_Rep3 1157.61930702721 1157.61766490379 24.951 3 -1.0699994151780485 0.32907160487378057 1.0 ['ENSG00000113645|ENST00000265293|WWC1', 'nc|ENSG00000113645|Q8IX03-2|WWC1'] 95543 7245 SAQTHFAA True PC9_epitope_Rep6 831.3875161872298 831.38640993586 36.992 2 -1.070023638128456 0.32908036670410323 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 125294 8647 VLRSLYMVI True NCI_RA007_Epitope_Rep3 1092.63653731448 1092.6354299358602 41.092 2 -1.0700724147754943 0.3291197095733706 1.0 ['ENSG00000205409|ENST00000329322|OR52E6'] 5401 22563 ALVPDELLK True PC9_epitope_Rep1 996.5855472874399 996.58444993586 91.594 2 -1.0700760993923282 0.3291197095733706 1.0 ['nc|ENSG00000086015|Q6P0Q8-2|MAST2', 'ENSG00000086015|ENST00000361297|MAST2'] 85649 8732 QLQGELQAP True PC9_epitope_Rep5 982.5083595958998 982.50726993586 38.529 2 -1.0700859230982822 0.3291197095733706 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 34761 18932 GQRRRWRRAVG True H1975_Epitope_Rep2 1396.80246539568 1396.80082490379 78.588 3 -1.0701265844135823 0.329128635040023 1.0 ['ENST00000367330.5_1_1:201123337-201123409:-|nuORF'] 118475 7096 VDRLVLESP True NCI_RA007_Epitope_Rep1 1026.57095985246 1026.5698699358602 31.595 2 -1.0701547001821945 0.329128635040023 1.0 ['ENSG00000183763|ENST00000331456|TRAIP'] 101917 17745 SPLLLSPA True PC9_epitope_Rep4 796.46945490604 796.46834993586 76.278 2 -1.0702493173071843 0.329128635040023 1.0 ['ENST00000558912.1_1_15:40628793-40629063:-|nuORF'] 93187 21425 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 88.647 2 -1.0702575374197996 0.329128635040023 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 98902 3421 SIWHTACA True PC9_epitope_Rep6 887.39597269595 887.39486993586 19.326 2 -1.070364955376551 0.3291722706083596 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 98292 20282 SIFNIDFLD True PC9_epitope_Rep2 1082.52842633414 1082.52732993586 83.436 2 -1.0703694882631083 0.3291722706083596 1.0 ['ENSG00000141052|ENST00000425538|MYOCD', 'nc|ENSG00000141052|Q8IZQ8|MYOCD'] 16152 15276 EEEMQRRRAKK True NCI_RA007_Epitope_Rep2 1459.7677792493898 1459.76668993586 64.115 2 -1.0704237875187745 0.3292071450955813 1.0 ['nc|ENSG00000179119|Q68D10-2|SPTY2D1', 'ENSG00000179119|ENST00000336349|SPTY2D1'] 41698 5677 IDLHYYAQ True PC9_epitope_Rep2 1021.48689587533 1021.48578993586 27.225 2 -1.0704354599307515 0.32921590389763006 1.0 ['ENST00000449421.6_1_17:73205928-73222855:+|nuORF', 'ENST00000583948.5_1_17:73201841-73222120:+|nuORF', 'nc|ENSG00000125450|Q9BW27-3|NUP85', 'KIAA0195-NUP85|1|fusion', 'ENSG00000125450|ENST00000245544|NUP85', 'ENST00000577561.1_1_17:73214398-73221993:+|nuORF', 'nc|ENSG00000125450|Q9BW27-2|NUP85', 'ENST00000581104.5_1_17:73208151-73231006:+|nuORF'] 56641 20146 LEAAEFLERRE True H1975_Epitope_Rep1 1361.69392851945 1361.6928299358601 83.838 2 -1.0704495401604464 0.3292291220556745 1.0 ['ENST00000460667.5_1_10:111985902-112004616:+|nuORF', 'nc|ENSG00000119950|P50539|MXI1'] 103161 16097 SQNLEYPL True PC9_epitope_Rep2 962.47091145802 962.46980993586 67.175 2 -1.0704692179755306 0.3292291220556745 1.0 ['ENSG00000175518|ENST00000380184|UBQLNL'] 65939 7358 LSLLKDGA True PC9_epitope_Rep1 815.47526856247 815.47416993586 33.114 2 -1.0704703991998277 0.3292291220556745 1.0 ['ENSG00000146350|ENST00000398212|TBC1D32', 'nc|ENSG00000146350|Q96NH3-4|TBC1D32', 'ENST00000368464.7_1_6:121417353-121436400:-|nuORF', 'ENST00000464622.5_1_6:121401919-121436400:-|nuORF'] 13566 11383 DPNLDDLLR True H1975_Epitope_Rep3 1069.54038800017 1069.53928993586 48.897 2 -1.0705058597373964 0.3292509368186032 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C'] 18714 10728 ELDHDLHSI True PC9_epitope_Rep1 1077.50908787189 1077.50798993586 46.153 2 -1.0705568127400915 0.32927275101188147 1.0 ['CEP350|p.G2941D|1|0.59|ENSG00000135837|chr1:180095833-180095833|G/A|missense_variant'] 13329 15794 DMEDEYML True PC9_epitope_Rep1 1044.37799924296 1044.37690993586 65.567 2 -1.0706080699836285 0.32934679009283074 1.0 ['ENSG00000214013|ENST00000318010|GANC'] 24360 9792 FAEFEDFPET True H1975_Epitope_Rep1 1230.5080848123798 1230.50698993586 42.592 2 -1.0706341581262993 0.32935124619743317 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-6|ATG4B', 'ENST00000465399.5_1_2:242577129-242594780:+|nuORF', 'ENST00000493618.5_1_2:242577129-242598937:+|nuORF', 'ENST00000483778.5_1_2:242577129-242598587:+|nuORF', 'ENST00000475195.5_1_2:242577129-242594181:+|nuORF', 'ENST00000468018.5_1_2:242577129-242590612:+|nuORF', 'ENST00000494465.5_1_2:242577129-242592771:+|nuORF', 'ENST00000430617.6_3_2:242577147-242592771:+|nuORF', 'nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 38012 11722 HEIELRMR True PC9_epitope_Rep5 1082.56549763254 1082.56440993586 50.087 2 -1.0706359981811422 0.32935124619743317 1.0 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 38735 11541 HHTSQCPEFP True PC9_epitope_Rep1 1181.4923922619298 1181.49128993586 49.271 2 -1.0706853823210605 0.32936875775181146 1.0 ['ENST00000262410.9_2_17:44102558-44102828:+|nuORF'] 42870 19908 IFREDYSI True PC9_epitope_Rep2 1041.51311062317 1041.51200993586 81.972 2 -1.0707088407242344 0.32936875775181146 1.0 ['ENSG00000174243|ENST00000308025|DDX23'] 93192 22038 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 91.099 2 -1.070755888770264 0.32938196819760307 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 64905 7532 LSAVVDLNGRY True H1975_Epitope_Rep2 1205.6404363946099 1205.6393299358601 33.922 2 -1.0708085895915351 0.32938196819760307 1.0 ['ENST00000465906.5_1_10:6157393-6157516:+|nuORF'] 57393 3146 LEHRILEEEE True PC9_epitope_Rep3 1295.63574493699 1295.63410490379 17.092 3 -1.0708595167781023 0.32938196819760307 1.0 ['ENSG00000133056|ENST00000684373|PIK3C2B', 'PIK3C2B|p.R970Pfs*17|1|0.25|ENSG00000133056|chr1:204443543-204443556|CAGATACTGGTAGC/-|frameshift_variant', 'PIK3C2B|p.R287Pfs*38|4|0.12|ENSG00000133056|chr1:204468943-204468944|-/G|frameshift_variant'] 91209 21766 RLRHRRHLLF True PC9_epitope_Rep6 1402.85343833938 1402.85179490379 96.615 3 -1.0709162038510824 0.32939072311648976 1.0 ['SLC18A3|p.R351Lfs*98|1|0.21|ENSG00000187714|chr10:49611788-49611789|GC/-|frameshift_variant'] 95906 10960 SDVDYRHYLHH True H1975_Epitope_Rep2 1440.6534606898 1440.65182490379 47.186 3 -1.070991767452933 0.3294169865016579 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB'] 5281 3240 ALRLRKKSEKK True NCI_RA007_Epitope_Rep1 1355.8725020181098 1355.87086490379 16.497 3 -1.0710040485790682 0.3294169865016579 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-3|TRIO'] 93970 12023 RVMLDYYRQSR True NCI_RA007_Epitope_Rep1 1485.75106655609 1485.74941490379 50.754 3 -1.0710551418829766 0.3294169865016579 1.0 ['ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 91092 5782 RLLRVLKLA True PC9_epitope_Rep1 1080.74953335112 1080.74842993586 27.056 2 -1.071073614937447 0.3294344942822829 1.0 ['SCN4A|p.F677L|1|0.42|ENSG00000007314|chr17:63957509-63957509|A/G|missense_variant'] 101452 5793 SNNFDLNRNFP True H1975_Epitope_Rep3 1336.61601255192 1336.6149099358602 27.306 2 -1.0710871571074423 0.3294344942822829 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 22693 8795 ETVELHKLKL True NCI_RA007_Epitope_Rep3 1208.71287305888 1208.71176993586 41.684 2 -1.0711890575729077 0.32944324782977613 1.0 ['ENST00000552207.1_1_12:56188062-56211500:-|nuORF', 'ENSG00000205323|ENST00000336133|SARNP'] 72999 4838 NDDFKALLQ True NCI_RA007_Epitope_Rep5 1062.53457434374 1062.53346993586 25.301 2 -1.0713008807600328 0.3294825605680869 1.0 ['ENSG00000204131|ENST00000633930|NHSL2'] 7642 14475 ASLQALPPAGG True PC9_epitope_Rep4 980.5290950404798 980.52798993586 63.589 2 -1.0713214476514845 0.3294825605680869 1.0 ['ENST00000372638.3_1_1:41327017-41327251:-|nuORF'] 68043 12182 LTNHCERCWKY True H1975_Epitope_Rep3 1451.6438246062298 1451.6427299358602 52.03 2 -1.071327558403718 0.3294825605680869 1.0 ['RYR1|p.Y2648C|1|0.17|ENSG00000196218|chr19:38504236-38504236|A/G|missense_variant'] 129634 6624 VTHFIEHQK True NCI_RA007_Epitope_Rep2 1137.5930922793698 1137.59198993586 30.377 2 -1.071397787987534 0.3295088172716712 1.0 ['ENSG00000152467|ENST00000282326|ZSCAN1'] 76682 16930 NTLERREKHEK True PC9_epitope_Rep3 1438.7640737679396 1438.7629699358602 70.277 2 -1.0714210140354614 0.3295088172716712 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 63404 10003 LPGIHVSA True PC9_epitope_Rep2 792.4493881678 792.44828993586 43.805 2 -1.0714330314466778 0.3295088172716712 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 64339 10932 LQNRRLFQSLH True NCI_RA007_Epitope_Rep2 1410.7844152896998 1410.7833099358602 47.13 2 -1.0715286513869773 0.32955672740562836 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 20984 22007 ERAGGRHG True PC9_epitope_Rep4 838.4157966237399 838.41468993586 92.871 2 -1.071663685835982 0.32966989936433766 1.0 ['ENST00000300249.9_1_18:32621372-32650196:+|nuORF'] 74805 20228 NLNYILYV True PC9_epitope_Rep6 1010.5436824754598 1010.54258993586 90.49 2 -1.0716840384995283 0.32967434575474774 1.0 ['ENST00000287957.3_1_7:92086815-92086875:+|nuORF'] 99461 16882 SLELEQPPAS True PC9_epitope_Rep5 1069.5291546101298 1069.52804993586 69.949 2 -1.0716887989473782 0.32967434575474774 1.0 ['ENSG00000120278|ENST00000696526|PLEKHG1'] 109489 9367 TGWRWRSR True PC9_epitope_Rep2 1103.5736942474698 1103.5725899358602 41.365 2 -1.071713817205334 0.3296918438466659 1.0 ['ENST00000397397.6_1_11:866620-867061:+|nuORF'] 94325 9637 RWWFRRLFLIF True NCI_RA007_Epitope_Rep1 1638.9299573245796 1638.9283049037901 41.486 3 -1.071722240893286 0.3296918438466659 1.0 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 115218 17010 TVAYILYRRYR True NCI_RA007_Epitope_Rep2 1472.8252174725199 1472.8241299358601 70.901 2 -1.0717653541935155 0.3297136443133467 1.0 ['ENST00000486986.6_1_1:151752280-151755498:-|nuORF', 'nc|ENSG00000182134|Q9Y2W6-3|TDRKH', 'ENSG00000182134|ENST00000368824|TDRKH', 'ENST00000463553.1_1_1:151755369-151755498:-|nuORF'] 79196 11576 PGETYYYISVP True NCI_RA007_Epitope_Rep1 1287.6023195503901 1287.6012299358601 48.997 2 -1.071873012213763 0.3297615473968598 1.0 ['ENSG00000243364|ENST00000368409|EFNA4', 'EFNA4|p.D179Tfs*15|1|0.33|ENSG00000243364|chr1:155068912-155068912|G/-|frameshift_variant', 'nc|ENSG00000243364|P52798-2|EFNA4', 'nc|ENSG00000243364|P52798-3|EFNA4'] 73511 5263 NFGAGGIK True NCI_RA007_Epitope_Rep5 762.40243797538 762.40134993586 26.94 2 -1.0720599810961142 0.32982694265354595 1.0 ['nc|ENSG00000160218|P48553-2|TRAPPC10'] 112655 7314 TPFGKAAA True H1975_Epitope_Rep3 761.4071890026498 761.40608993586 33.106 2 -1.0720922730309779 0.32982694265354595 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'nc|ENSG00000204271|Q5JUX0-2|SPIN3', 'SPIN3|p.G19Afs*9|1|0.28|ENSG00000204271|chrX:56994892-56994892|C/-|frameshift_variant'] 73445 11386 NETLRYSVP True PC9_epitope_Rep2 1077.54547338061 1077.54436993586 49.118 2 -1.07209320266976 0.32982694265354595 1.0 ['nc|ENSG00000142765|Q8IYJ3-2|SYTL1', 'ENSG00000142765|ENST00000616558|SYTL1'] 118922 17789 VEEQTFKEKEL True PC9_epitope_Rep6 1378.6980108403798 1378.69690993586 81.06 2 -1.072095767328155 0.32982707993474714 1.0 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant', 'AKAP9|p.T1908Sfs*2|1|0.23|ENSG00000127914|chr7:92061280-92061283|ACAG/-|frameshift_variant', 'AKAP9|p.T2154Nfs*6|1|0.16|ENSG00000127914|chr7:92070057-92070058|-/A|frameshift_variant', 'ENST00000484815.1_1_7:91670035-91672122:+|nuORF'] 18326 19230 EIVLKIHFE True PC9_epitope_Rep4 1126.63864548946 1126.63754993586 82.068 2 -1.0721050744479208 0.32982707993474714 1.0 ['nc|ENSG00000163535|Q562F6-3|SGO2'] 14577 19250 DVFRVFDSL True PC9_epitope_Rep1 1096.5553097883198 1096.5542099358602 78.845 2 -1.0721082556328012 0.32982707993474714 1.0 ['ENSG00000173599|ENST00000393960|PC'] 66100 11491 LSNPPTPP True PC9_epitope_Rep1 821.42831837005 821.4272299358599 49.08 2 -1.072155486188549 0.3298315215263549 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant'] 19588 10155 ELRFKQYLRNP True H1975_Epitope_Rep1 1462.8044820279397 1462.80283490379 44.0 3 -1.0721656274675142 0.3298315215263549 1.0 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1'] 33434 12801 GLGGFGAP True NCI_RA007_Epitope_Rep1 674.33877508966 674.33822496793 53.78 1 -1.0722634957152644 0.32986636738528996 1.0 ['ENSG00000116221|ENST00000360840|MRPL37', 'ENST00000336230.10_1_1:54665916-54675667:+|nuORF'] 88591 24459 RALLGKFINVI True PC9_epitope_Rep4 1242.78122740222 1242.77959490379 102.57 3 -1.0723126678806403 0.32988385749706384 1.0 ['ENSG00000133069|ENST00000358024|TMCC2', 'nc|ENSG00000133069|O75069-3|TMCC2', 'nc|ENSG00000133069|O75069-5|TMCC2', 'nc|ENSG00000133069|O75069-2|TMCC2'] 109131 8636 TFKPEEILY True NCI_RA007_Epitope_Rep4 1138.5910265906998 1138.58938490379 40.002 3 -1.0723511391053975 0.32988385749706384 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9', 'ENST00000475908.5_1_5:56205193-56212726:+|nuORF'] 121466 12625 VGITSGFWIW True PC9_epitope_Rep6 1164.59678067748 1164.59512490379 60.024 3 -1.072395041978985 0.3299187013088698 1.0 ['ENSG00000157240|ENST00000287934|FZD1', 'ENSG00000180340|ENST00000315323|FZD2'] 99755 8587 SLGLEKFKKPE True NCI_RA007_Epitope_Rep5 1274.7234377425796 1274.7223499358602 39.71 2 -1.0724240843417827 0.3299231401615492 1.0 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 133125 8270 WCPLLSPPP True H1975_Epitope_Rep3 1008.5102741722 1008.50916993586 36.792 2 -1.0724583096322264 0.3299231401615492 1.0 ['ENST00000343110.2_1_1:203456044-203456392:+|nuORF'] 57548 7259 LEKWRKYFP True NCI_RA007_Epitope_Rep1 1265.6920780446499 1265.69044490379 32.226 3 -1.0725539170673035 0.3299318840201477 1.0 ['nc|ENSG00000110274|Q9UPV0-2|CEP164', 'ENSG00000110274|ENST00000278935|CEP164', 'ENST00000528706.5_1_11:117279912-117282881:+|nuORF', 'ENST00000533675.5_1_11:117265793-117282881:+|nuORF', 'ENST00000533223.1_1_11:117257895-117280842:+|nuORF', 'ENST00000532187.1_1_11:117280536-117282168:+|nuORF'] 128078 25214 VRRLPGGG True PC9_epitope_Rep6 810.4824196315798 810.48132993586 112.24 2 -1.072573860893307 0.3299406276505513 1.0 ['ENST00000497505.5_1_2:203879615-203880929:+|nuORF'] 45812 19645 ISPFSISSAMA True PC9_epitope_Rep5 1109.54269649929 1109.5415899358602 80.619 2 -1.0726770152707539 0.3299712943632568 1.0 ['ENSG00000021355|ENST00000380739|SERPINB1'] 8375 21601 ATNPLILWTL True PC9_epitope_Rep2 1140.6542955536002 1140.6531899358602 88.562 2 -1.0727057557680975 0.3299712943632568 1.0 ['ENST00000472157.1_1_1:46806507-46807258:+|nuORF'] 526 7985 AAPSHEVVVVV True PC9_epitope_Rep4 1105.6131590176099 1105.61206993586 38.161 2 -1.0727182990937718 0.3299712943632568 1.0 ['nc|ENSG00000166589|O75309-3|CDH16', 'nc|ENSG00000166589|O75309-4|CDH16', 'nc|ENSG00000166589|O75309-2|CDH16', 'ENSG00000166589|ENST00000299752|CDH16', 'CDH16|p.K563Qfs*41|1|0.1|ENSG00000166589|chr16:66912002-66912003|-/G|frameshift_variant'] 90760 8546 RKRKKRDSEEE True PC9_epitope_Rep3 1459.78553748851 1459.78390490379 37.827 3 -1.0727649712045917 0.3299712943632568 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 37050 12550 GVSEERIHL True PC9_epitope_Rep2 1038.5458077337798 1038.54470993586 53.582 2 -1.0727877992396855 0.3299712943632568 1.0 ['nc|ENSG00000149636|Q9H410-4|DSN1', 'ENSG00000149636|ENST00000373750|DSN1'] 98901 3269 SIWHTACA True PC9_epitope_Rep6 887.39597269595 887.39486993586 18.642 2 -1.0728432728709991 0.32999308464137994 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 89116 5814 REFERNFYFEE True NCI_RA007_Epitope_Rep1 1564.6946567954399 1564.69300490379 26.669 3 -1.0729082073493432 0.3300324865943873 1.0 ['ENST00000257290.9_1_4:55095294-55095372:+|nuORF'] 104279 13204 SSEEDYGEFEF True H1975_Epitope_Rep1 1337.4935569470497 1337.4924499358601 55.885 2 -1.0729262676998423 0.3300324865943873 1.0 ['CON__Q28107'] 114529 3476 TSGSSGSSTK True PC9_epitope_Rep2 897.4039540970101 897.40284993586 18.65 2 -1.0729561241351917 0.3300324865943873 1.0 ['ENSG00000137776|ENST00000380516|SLTM'] 16374 21911 EELETWNL True PC9_epitope_Rep1 1032.4763907612798 1032.47528993586 89.096 2 -1.0730127751571452 0.3300324865943873 1.0 ['ENST00000547237.1_1_14:25900789-25901323:-|nuORF'] 22878 8130 EVETREKEP True H1975_Epitope_Rep1 1115.54586730343 1115.5447699358601 36.21 2 -1.0730251415390113 0.3300324865943873 1.0 ['nc|ENSG00000104221|Q9HAW0-2|BRF2', 'ENSG00000104221|ENST00000220659|BRF2'] 65546 15292 LSGDLLDKNPY True H1975_Epitope_Rep3 1233.6241176241301 1233.6230299358601 64.229 2 -1.073071464503261 0.3300324865943873 1.0 ['TMEM63A|p.D174N|1|0.13|ENSG00000196187|chr1:225867158-225867158|C/T|missense_variant'] 95535 8819 SAQTHFAA True PC9_epitope_Rep1 831.3875161872298 831.38640993586 38.764 2 -1.0730992542712618 0.33004122742928715 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 125301 20580 VLRSWWPRWWW True NCI_RA007_Epitope_Rep1 1656.8466216234397 1656.8455299358602 84.275 2 -1.0731062666208142 0.3300456621004566 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 3025 11846 AFSQIAYLDQH True PC9_epitope_Rep5 1291.61970095003 1291.6180649037901 50.564 3 -1.073109690582238 0.3300456621004566 1.0 ['ENSG00000198440|ENST00000333201|ZNF583'] 98626 7928 SIPDAFWWAVV True PC9_epitope_Rep3 1289.64445914589 1289.64280490379 35.476 3 -1.073123666907765 0.3300461767238006 1.0 ['ENSG00000177272|ENST00000369769|KCNA3', 'ENSG00000111262|ENST00000382545|KCNA1', 'ENSG00000182255|ENST00000328224|KCNA4', 'ENSG00000130037|ENST00000252321|KCNA5', 'nc|ENSG00000130037|P22460-2|KCNA5', 'ENSG00000177301|ENST00000316361|KCNA2', 'nc|ENSG00000151079|P17658|KCNA6'] 128016 17687 VRRAGLGP True NCI_RA007_Epitope_Rep4 824.4980696957199 824.49696993586 76.529 2 -1.0731238632992977 0.3300461767238006 1.0 ['ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 19703 16369 ELSGKNRQYP True H1975_Epitope_Rep2 1190.6043852390599 1190.6032899358602 68.184 2 -1.0731404904126032 0.3300461767238006 1.0 ['ENSG00000255423|ENST00000533473|EBLN2'] 13563 7310 DPMGQTSFEHL True H1975_Epitope_Rep1 1260.54448740444 1260.5433899358602 33.125 2 -1.0731469135952676 0.3300461767238006 1.0 ['ENST00000461108.5_1_3:52003444-52003858:-|nuORF', 'nc|ENSG00000114779|Q96IU4-2|ABHD14B', 'ENST00000487005.1_1_3:52003444-52008077:-|nuORF', 'ENSG00000114779|ENST00000361143|ABHD14B'] 99864 5012 SLHGGWPS True H1975_Epitope_Rep2 839.39260156767 839.39150993586 24.361 2 -1.0731572449911868 0.3300461767238006 1.0 ['ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 99863 8138 SLHFSEPSI True PC9_epitope_Rep1 1015.49746055903 1015.49636993586 36.133 2 -1.073194893658621 0.3300461767238006 1.0 ['ENSG00000176092|ENST00000308182|CRYBG2', 'ENST00000520372.5_1_1:26655223-26662846:-|nuORF'] 28734 6035 FSWFWFRLYWF True H1975_Epitope_Rep1 1683.8026911227896 1683.8015899358602 28.285 2 -1.073202743141635 0.3300461767238006 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 129205 9471 VTDKLENFHQY True H1975_Epitope_Rep3 1392.66737941844 1392.66628993586 41.434 2 -1.0732056988201646 0.3300461767238006 1.0 ['ENSG00000128519|ENST00000249284|TAS2R16'] 16884 11181 EFYEAKLQ True PC9_epitope_Rep1 1026.5022115862998 1026.50110993586 47.891 2 -1.0732231399551846 0.3300461767238006 1.0 ['ENSG00000243710|ENST00000372492|CFAP57'] 81242 10055 PPPELLNGNVK True H1975_Epitope_Rep1 1176.65027280232 1176.64916993586 43.617 2 -1.0732325449701516 0.3300461767238006 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'ENST00000466229.5_1_1:196648727-196709933:+|nuORF'] 55312 20301 LARRGAEP True PC9_epitope_Rep6 868.4878989348398 868.48680993586 90.794 2 -1.0732329967984005 0.3300461767238006 1.0 ['chr12:56784133-56784853|113|13.76|0.25|5.77|+|0|TE_info:SVA_D,SVA_D_dup973,SVA,Retroposon,donor,-,56782661,56784133|None,HSD17B6|9'] 90627 16236 RKKKLKKKKTL True PC9_epitope_Rep5 1397.9922232279696 1397.99056490379 67.44 3 -1.0732382427727045 0.3300461767238006 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 137208 28322 YLEELILPI True H1975_Epitope_Rep1 1101.6321631266899 1101.63106993586 119.83 2 -1.0733071571086277 0.3300679597719891 1.0 ['ENSG00000112078|ENST00000373731|KCTD20', 'nc|ENSG00000112078|Q7Z5Y7-3|KCTD20', 'ENST00000474988.5_1_6:36410818-36454949:+|nuORF', 'nc|ENSG00000112078|Q7Z5Y7-2|KCTD20'] 21958 10282 ESLKRPWED True NCI_RA007_Epitope_Rep2 1158.5669371011797 1158.5658499358601 44.584 2 -1.0733334843167779 0.3300897422519044 1.0 ['ENSG00000029639|ENST00000367166|TFB1M'] 123064 2550 VGYWLSEKK True PC9_epitope_Rep6 1108.59169529704 1108.5905899358602 14.737 2 -1.0733559958425172 0.3300984804017479 1.0 ['ENSG00000100605|ENST00000267615|ITPK1', 'nc|ENSG00000100605|Q13572-2|ITPK1', 'ENST00000555495.5_1_14:93483145-93581508:-|nuORF'] 110986 9991 TLDDLQYMIFH True H1975_Epitope_Rep1 1394.65403785342 1394.65294993586 43.366 2 -1.0734062691327853 0.3301029125960322 1.0 ['nc|ENSG00000134240|P54868-3|HMGCS2', 'nc|ENSG00000134240|P54868-2|HMGCS2', 'ENSG00000134240|ENST00000369406|HMGCS2'] 18111 12791 EILITRQRHI True H1975_Epitope_Rep3 1277.75680355953 1277.75570993586 54.418 2 -1.0734380486113246 0.3301029125960322 1.0 ['ENSG00000140623|ENST00000268231|SEPTIN12'] 39302 5967 HLQPRASDVRP True NCI_RA007_Epitope_Rep5 1274.68436689526 1274.6827349037899 29.636 3 -1.0734436090235886 0.3301116502321699 1.0 ['ENST00000592172.5_1_19:6026246-6110452:-|nuORF'] 91428 20899 RNLLIIMLKMR True NCI_RA007_Epitope_Rep2 1399.8519668976699 1399.85032490379 86.445 3 -1.0734687834778684 0.3301117762909053 1.0 ['ENST00000396418.6_1_8:79514082-79514259:+|nuORF'] 62026 11348 LLLVFMPL True H1975_Epitope_Rep3 944.57689718004 944.57578993586 48.761 2 -1.073487452679666 0.3301117762909053 1.0 ['TMEM185A|p.W112L|1|0.19|ENSG00000269556|chrX:149608715-149608715|C/A|missense_variant'] 14293 3621 DTARQALA True NCI_RA007_Epitope_Rep4 844.4402800360799 844.43918993586 19.996 2 -1.0735296008350406 0.3301117762909053 1.0 ['KDM5A|p.R1259T|1|0.18|ENSG00000073614|chr12:307608-307608|C/G|missense_variant'] 82608 23620 PVKKSLLG True PC9_epitope_Rep6 840.5432885526399 840.54218993586 104.01 2 -1.0736131061194332 0.33019876878130217 1.0 ['ENST00000397909.6_1_12:78388596-78392184:+|nuORF'] 20853 5392 EQQMRHYMRFQ True H1975_Epitope_Rep3 1552.70273646468 1552.7016299358602 25.805 2 -1.0737141793469516 0.330272716601672 1.0 ['ENSG00000102409|ENST00000372695|BEX4'] 93195 22465 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 92.831 2 -1.0738120879751198 0.33032057803166653 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 63618 9418 LPLSWKHRT True H1975_Epitope_Rep3 1136.6454622053998 1136.6443699358601 41.229 2 -1.0740657910087081 0.3304466905771112 1.0 ['ENST00000589768.5_1_17:76732793-76732874:-|nuORF'] 64679 22152 LRKLIFIKKK True PC9_epitope_Rep3 1285.89619758481 1285.89510993586 90.493 2 -1.07408365668569 0.3304554228180917 1.0 ['ENSG00000184363|ENST00000331563|PKP3', 'nc|ENSG00000184363|Q9Y446-2|PKP3'] 62377 17126 LLRQQNLF True PC9_epitope_Rep4 1030.5923640033798 1030.59126993586 73.877 2 -1.0740952196745506 0.3304598450663815 1.0 ['ENSG00000186130|ENST00000373659|ZBTB6'] 101965 20888 SPLVVKFR True PC9_epitope_Rep4 944.5807366905199 944.57962993586 88.504 2 -1.0741114679337684 0.3304598450663815 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.N3720Kfs*28|2|0.54|ENSG00000157423|chr16:70868720-70868721|-/T|frameshift_variant'] 110141 7479 TIDAVTEKF True H1975_Epitope_Rep3 1022.52842633414 1022.5273299358599 33.748 2 -1.0742360395812742 0.33049465955476726 1.0 ['ENST00000477789.5_1_X:119059185-119070773:-|nuORF'] 128812 23454 VSRRAAQL True PC9_epitope_Rep4 899.5300980999898 899.52900993586 98.502 2 -1.074270582124505 0.3305079220186477 1.0 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 63022 18530 LNHEMYEA True PC9_epitope_Rep5 1005.4225813666098 1005.42148993586 76.299 2 -1.0742858487094293 0.3305079220186477 1.0 ['ENSG00000069535|ENST00000378069|MAOB', 'nc|ENSG00000069535|P27338-2|MAOB'] 65833 22370 LSKLVYPEV True PC9_epitope_Rep1 1046.60119735158 1046.60010993586 90.864 2 -1.0743048643250865 0.3305079220186477 1.0 ['ENSG00000156222|ENST00000394573|SLC28A1', 'SLC28A1|p.G520Afs*35|1|0.16|ENSG00000156222|chr15:84935495-84935495|G/-|frameshift_variant'] 69094 20318 LVKEQNGVQL True PC9_epitope_Rep5 1126.6346227381798 1126.63352993586 83.193 2 -1.0743318154835704 0.3305079220186477 1.0 ['SLC6A3|p.Q503Sfs*9|1|0.32|ENSG00000142319|chr5:1406281-1406281|C/-|frameshift_variant', 'ENSG00000142319|ENST00000270349|SLC6A3'] 43988 11736 ILGVKKEMI True NCI_RA007_Epitope_Rep2 1029.6256382776098 1029.6245499358602 50.247 2 -1.0743357759372425 0.3305079220186477 1.0 ['ENSG00000100991|ENST00000252015|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-3|TRPC4AP', 'nc|ENSG00000100991|Q8TEL6-2|TRPC4AP'] 58168 4915 LESINSIK True NCI_RA007_Epitope_Rep2 902.50729696674 902.50618993586 23.738 2 -1.0743418793809207 0.3305079220186477 1.0 ['ENSG00000117500|ENST00000370282|TMED5', 'ENST00000483033.1_1_1:93620229-93625801:-|nuORF'] 5914 12017 APHLQHNAF True NCI_RA007_Epitope_Rep4 1033.5093626554099 1033.5082699358602 53.228 2 -1.0743998056665547 0.33054273270218815 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 15063 7000 EAAQRGESLQL True H1975_Epitope_Rep1 1200.6098645423199 1200.6087699358602 31.962 2 -1.0744618724911976 0.33056450245804375 1.0 ['ENST00000479033.1_1_10:5691052-5708523:-|nuORF', 'nc|ENSG00000196372|Q8WXK3-2|ASB13', 'ENSG00000196372|ENST00000357700|ASB13'] 131423 3888 VVTLVMDCL True PC9_epitope_Rep5 991.50822556687 991.50712993586 20.033 2 -1.0744842957888112 0.3305819609070401 1.0 ['ENST00000570586.1_1_17:53799978-53800014:-|nuORF', 'ENST00000424486.2_2_17:53798468-53800203:-|nuORF'] 130399 2603 VTVPPDVFF True NCI_RA007_Epitope_Rep5 1019.53278343859 1019.53168993586 14.729 2 -1.0744844610242443 0.3305819609070401 1.0 ['ENST00000310418.8_1_5:175819519-175819774:-|nuORF'] 15326 7471 EAKRKLQQHNM True H1975_Epitope_Rep3 1381.72485180825 1381.72321490379 33.716 3 -1.0745892130045207 0.33061676880949276 1.0 ['SLC25A13-MAGI2|2|fusion', 'SLC25A13-MAGI2|1|fusion', 'nc|ENSG00000187391|Q86UL8-2|MAGI2', 'ENSG00000187391|ENST00000354212|MAGI2', 'ENST00000520379.2_1_7:77814916-78119132:-|nuORF'] 37162 23710 GVTLGRHRRR True PC9_epitope_Rep1 1206.71700443622 1206.71590993586 95.995 2 -1.074630210368891 0.3306385364645134 1.0 ['ENST00000493449.5_1_16:322367-324481:-|nuORF'] 129349 8181 VTEADLFHTIE True H1975_Epitope_Rep1 1273.6190322436898 1273.61792993586 36.408 2 -1.0747601057984502 0.33069510907123206 1.0 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1'] 74260 18190 NIEIFLLWFWW True PC9_epitope_Rep4 1565.80710779689 1565.8054649037902 78.034 3 -1.0747782920493707 0.33069510907123206 1.0 ['ENST00000502346.1_1_5:82350650-82350776:-|nuORF'] 29211 24057 FVCLRQRL True PC9_epitope_Rep2 1033.58550480113 1033.58440993586 98.039 2 -1.0748275903231101 0.33070383602367853 1.0 ['SNX10|p.W59C|1|0.19|ENSG00000086300|chr7:26364600-26364600|G/T|missense_variant'] 83006 10239 PYIKDSVR True NCI_RA007_Epitope_Rep5 976.5341804209199 976.53308993586 46.015 2 -1.0748641354830857 0.33071256274854943 1.0 ['ENSG00000198718|ENST00000361462|TOGARAM1', 'nc|ENSG00000198718|Q9Y4F4|TOGARAM1', 'UBE2E2-FAM179B|1|fusion'] 71602 20590 MLKRKWRTF True H1975_Epitope_Rep2 1264.7226669802797 1264.72102490379 85.291 3 -1.0749371816184503 0.3307343277354751 1.0 ['ENST00000577944.5_2_17:80397520-80400257:+|nuORF'] 28144 20091 FRKKKREQ True NCI_RA007_Epitope_Rep5 1118.6672602791398 1118.6661699358601 84.222 2 -1.0749888269154535 0.33073453104221534 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 80248 8608 PLDEALQR True NCI_RA007_Epitope_Rep5 940.4977949121999 940.49668993586 39.787 2 -1.0750381751712836 0.33073453104221534 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 81778 6656 PSEHHTGP True PC9_epitope_Rep5 860.37767977952 860.37658993586 30.574 2 -1.0750594906246493 0.33073453104221534 1.0 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 34752 16869 GQREEYLL True H1975_Epitope_Rep2 1006.5083595959 1006.50726993586 70.133 2 -1.0750606931151079 0.33073453104221534 1.0 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 125304 11861 VLRSWWPRWWW True NCI_RA007_Epitope_Rep1 1656.8466216234397 1656.8455299358602 50.117 2 -1.075068917531539 0.33073453104221534 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 122348 10583 VGSARALR True NCI_RA007_Epitope_Rep3 828.49298431528 828.49188993586 48.678 2 -1.0750781524640478 0.33073453104221534 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 47052 23378 IVSVLFFKLW True PC9_epitope_Rep5 1250.74271663518 1250.7416099358602 94.908 2 -1.0751083200353382 0.3307432564567227 1.0 ['ENST00000361611.10_1_14:23495117-23495210:-|nuORF'] 88391 7780 QYPLQGVEVQP True H1975_Epitope_Rep3 1256.6401020414398 1256.63900993586 34.91 2 -1.0751212098549854 0.3307519816437213 1.0 ['nc|ENSG00000135454|Q00973-2|B4GALNT1', 'ENSG00000135454|ENST00000341156|B4GALNT1', 'nc|ENSG00000135454|Q00973-3|B4GALNT1', 'ENST00000553142.5_1_12:58021700-58025915:-|nuORF'] 125640 18726 VMKKCRKL True NCI_RA007_Epitope_Rep1 1004.5987123371199 1004.59760993586 76.982 2 -1.0751550362705424 0.330769431335228 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2', 'nc|ENSG00000117479|O60779-2|SLC19A2'] 114576 7205 TSKSDLRSNDF True NCI_RA007_Epitope_Rep5 1268.59969378144 1268.5985899358602 34.391 2 -1.075158935263314 0.330769431335228 1.0 ['ENSG00000109738|ENST00000264428|GLRB'] 116270 20397 TVVEWMILPWV True NCI_RA007_Epitope_Rep1 1371.72608059487 1371.72498993586 83.552 2 -1.0752593154993795 0.3307869797030413 1.0 ['TRPC5|p.Q824Kfs*81|1|0.49|ENSG00000072315|chrX:111776765-111776765|G/-|frameshift_variant', 'ENSG00000072315|ENST00000262839|TRPC5'] 93154 17595 RRRRPAPL True NCI_RA007_Epitope_Rep5 1020.6417142376398 1020.64060993586 74.459 2 -1.075280987882954 0.3307869797030413 1.0 ['ENST00000298307.9_1_14:50234918-50235191:+|nuORF'] 3290 17715 AGGGRVLAQ True PC9_epitope_Rep6 827.4613498338299 827.46024993586 80.774 2 -1.0753016361380348 0.3307869797030413 1.0 ['ENST00000493850.1_1_7:2563236-2564953:+|nuORF'] 18456 12641 EKIWHHIFHNE True NCI_RA007_Epitope_Rep1 1488.7262317072398 1488.7251299358602 53.151 2 -1.0753126564208693 0.3307869797030413 1.0 ['ENST00000436287.1_1_1:224052226-224052508:-|nuORF'] 76963 13268 NVPFLWAWNAP True PC9_epitope_Rep2 1313.6556925359298 1313.65458993586 56.312 2 -1.075317089162651 0.3307869797030413 1.0 ['SPAM1|p.L371Qfs*18|1|0.46|ENSG00000106304|chr7:123959551-123959551|T/-|frameshift_variant', 'ENSG00000106304|ENST00000682466|SPAM1', 'nc|ENSG00000106304|P38567-2|SPAM1'] 122697 14919 VGTTTGQG True NCI_RA007_Epitope_Rep4 719.34498266891 719.34443496793 64.849 1 -1.0753837252714542 0.33080442688983613 1.0 ['nc|ENSG00000115761|Q9BSC4-2|NOL10'] 99360 10227 SLDTPSNLIPI True H1975_Epitope_Rep3 1168.63395403184 1168.6328499358601 44.386 2 -1.0753968569094252 0.33080442688983613 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 74353 11294 NISCKASQDI True PC9_epitope_Rep2 1077.5124590001699 1077.51136993586 48.766 2 -1.0754277106553536 0.3308218731669165 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 12901 12876 DLMANLTL True PC9_epitope_Rep5 889.45790424617 889.45680993586 54.537 2 -1.0754733959941019 0.3308218731669165 1.0 ['ENSG00000180182|ENST00000324817|MED14'] 91230 23607 RLRRLALFP True PC9_epitope_Rep1 1140.7243812324398 1140.72274490379 95.595 3 -1.075495190285921 0.3308262836138014 1.0 ['ENSG00000167004|ENST00000300289|PDIA3', 'ENST00000469684.1_1_15:44038662-44048907:+|nuORF'] 100019 6706 SLKASFCYVEH True NCI_RA007_Epitope_Rep2 1282.6016083577401 1282.59997490379 30.697 3 -1.0755102233743672 0.3308262836138014 1.0 ['ENST00000225171.6_1_10:69597845-69597905:-|nuORF'] 139106 7585 YSNSLLNTV True PC9_epitope_Rep5 1009.50802524273 1009.50692993586 34.123 2 -1.0755295187206895 0.33085705348764466 1.0 ['HTR1A|p.P397T|1|0.43|ENSG00000178394|chr5:63960531-63960531|G/T|missense_variant'] 135939 4950 YEWWFRWRLDR True NCI_RA007_Epitope_Rep1 1711.8371791385496 1711.8355349037902 23.338 3 -1.0755674556845165 0.33085705348764466 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 64348 16022 LQNRRLFQSLH True PC9_epitope_Rep5 1410.7844152896998 1410.7833099358602 66.618 2 -1.0755803950009983 0.33085705348764466 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 124705 8146 VLKELLQK True NCI_RA007_Epitope_Rep5 969.6222671493298 969.6211699358599 38.017 2 -1.075624734695906 0.33085705348764466 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant'] 15732 3305 EDDPEMKA True PC9_epitope_Rep1 933.37496246785 933.37386993586 17.616 2 -1.075638884443397 0.33085705348764466 1.0 ['ENST00000572422.1_1_6:109106963-109107203:-|nuORF'] 56414 8060 LDSGDLARF True H1975_Epitope_Rep3 992.4927095317599 992.49160993586 35.976 2 -1.075687061665827 0.33085705348764466 1.0 ['ENSG00000162639|ENST00000651461|HENMT1'] 68002 5569 LTLYFYYKFRT True NCI_RA007_Epitope_Rep3 1513.7969370360097 1513.79530490379 28.898 3 -1.0756992358369835 0.33085705348764466 1.0 ['ENSG00000040487|ENST00000375153|SLC66A1', 'nc|ENSG00000040487|Q6ZP29-2|SLC66A1', 'nc|ENSG00000040487|Q6ZP29-3|SLC66A1'] 42037 11067 IEDYDVIAS True PC9_epitope_Rep5 1023.4760564081099 1023.4749499358601 47.558 2 -1.0757452316509069 0.33085705348764466 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 46301 10854 ITENPPSR True PC9_epitope_Rep1 912.46649478392 912.46538993586 46.636 2 -1.075750129617733 0.33085705348764466 1.0 ['ENSG00000250423|ENST00000691062|KIAA1210', 'nc|ENSG00000250423|Q9ULL0|KIAA1210'] 122952 18766 VGWELEEL True PC9_epitope_Rep4 973.4756624852898 973.47456993586 80.266 2 -1.0758078848856554 0.33085705348764466 1.0 ['GRIN2B|p.V202L|1|0.34|ENSG00000273079|chr12:13753723-13753723|C/G|missense_variant'] 10700 1229 CSSDGCWGPGP True NCI_RA007_Epitope_Rep1 1064.36916589476 1064.3680699358601 6.4883 2 -1.0758496936305526 0.33085705348764466 1.0 ['nc|ENSG00000178568|Q15303-4|ERBB4', 'nc|ENSG00000178568|Q15303-3|ERBB4', 'nc|ENSG00000178568|Q15303-2|ERBB4', 'ENSG00000178568|ENST00000342788|ERBB4', 'ENST00000484594.5_1_2:212426591-213403254:-|nuORF'] 18715 15498 ELDHDLHSI True PC9_epitope_Rep2 1077.50908787189 1077.50798993586 64.886 2 -1.0759263257324778 0.3308918401126041 1.0 ['CEP350|p.G2941D|1|0.59|ENSG00000135837|chr1:180095833-180095833|G/A|missense_variant'] 92190 15401 RQGGGQRP True NCI_RA007_Epitope_Rep3 854.4470967520199 854.44598993586 68.136 2 -1.0760395928785547 0.33090056040662064 1.0 ['nc|ENSG00000185100|Q8N142-2|ADSS1'] 65381 12175 LSEQVPGTAL True H1975_Epitope_Rep1 1013.5393253710099 1013.53822993586 51.85 2 -1.076044069139826 0.33090928047334195 1.0 ['nc|ENSG00000177427|Q96C03-2|MIEF2'] 98296 15900 SIFRDFPL True PC9_epitope_Rep2 993.5283667644899 993.52726993586 66.413 2 -1.0760520519836108 0.33091368772236196 1.0 ['ENST00000403263.5_1_2:206950812-206950881:-|nuORF'] 88614 23426 RAMVAFLDCM True H1975_Epitope_Rep1 1155.5238927143498 1155.52225490379 97.355 3 -1.076061710474102 0.33091368772236196 1.0 ['ENSG00000196289|ENST00000419583|BECN2'] 137425 24994 YLLVKITRLG True NCI_RA007_Epitope_Rep5 1174.74377926434 1174.7426899358602 103.64 2 -1.0760776923687574 0.3309180947416433 1.0 ['ENST00000527221.1_1_17:79503184-79503550:+|nuORF'] 42628 15814 IETLSEWIKHR True H1975_Epitope_Rep1 1410.76194850962 1410.76084993586 66.135 2 -1.076082084492855 0.3309180947416433 1.0 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'nc|ENSG00000011451|O95785-2|WIZ', 'nc|ENSG00000011451|O95785-4|WIZ', 'nc|ENSG00000011451|O95785-3|WIZ'] 122378 12769 VGSFDIAG True PC9_epitope_Rep6 764.37046914076 764.36936993586 60.61 2 -1.0761959867850348 0.3309442518699992 1.0 ['ENSG00000104969|ENST00000221566|SGTA'] 62351 12805 LLRLGGIG True PC9_epitope_Rep2 797.5123227775299 797.51122993586 54.556 2 -1.0762212255322245 0.3309442518699992 1.0 ['ENSG00000135829|ENST00000367549|DHX9', 'DHX9|p.L1065Cfs*20|1|0.23|ENSG00000135829|chr1:182883563-182883563|C/-|frameshift_variant', 'ENST00000485081.5_1_1:182847108-182856566:+|nuORF'] 73438 5524 NESRKLWRALQ True NCI_RA007_Epitope_Rep1 1399.76843087239 1399.76677490379 25.557 3 -1.0763121122125603 0.3309442518699992 1.0 ['ENST00000549584.5_1_14:105453158-105465563:+|nuORF', 'ENSG00000140104|ENST00000547315|CLBA1'] 11131 10884 DEELGGSSRVP True PC9_epitope_Rep5 1144.53603089572 1144.5349299358602 46.852 2 -1.0763546965145694 0.3309790328255515 1.0 ['ENSG00000236104|ENST00000431845|ZBTB22'] 129718 18101 VTKARLTDK True NCI_RA007_Epitope_Rep5 1030.61349337078 1030.6123899358602 76.427 2 -1.0764963275626298 0.3309921555341273 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 48636 7798 KEIVVNGREY True NCI_RA007_Epitope_Rep5 1205.6404363946099 1205.6393299358601 36.697 2 -1.0764987189734796 0.3309921555341273 1.0 ['nc|ENSG00000151948|Q96MS3-2|GLT1D1', 'ENSG00000151948|ENST00000442111|GLT1D1'] 117827 23618 VANVQPSSKRA True NCI_RA007_Epitope_Rep2 1155.6360197205101 1155.6343649037901 99.029 3 -1.076519653114319 0.3309921555341273 1.0 ['ENST00000464717.5_1_7:154739579-154754102:-|nuORF', 'nc|ENSG00000157212|Q6ZW49-2|PAXIP1', 'nc|ENSG00000157212|Q6ZW49-1|PAXIP1', 'ENST00000457196.5_1_7:154735861-154782774:-|nuORF', 'ENSG00000157212|ENST00000404141|PAXIP1'] 55145 8578 LAMWGLVHSNL True H1975_Epitope_Rep1 1239.6434136000698 1239.64230993586 37.922 2 -1.0765400229478208 0.331039964557028 1.0 ['ENSG00000156966|ENST00000287590|B3GNT7'] 129717 18015 VTKARLTDK True NCI_RA007_Epitope_Rep5 1030.61349337078 1030.6123899358602 76.092 2 -1.076566438828887 0.33104436771125156 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 124017 23237 VKLLLPAAP True PC9_epitope_Rep6 920.6058888091999 920.60478993586 102.48 2 -1.0766042028110885 0.33104436771125156 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000358849.8_1_7:150725553-150730697:+|nuORF', 'ENST00000297504.10_1_7:150725553-150728339:+|nuORF', 'ENST00000462605.5_1_7:150725553-150729984:+|nuORF', 'ENST00000461373.5_1_7:150725553-150725944:+|nuORF', 'ENST00000466514.5_1_7:150725553-150731828:+|nuORF'] 129716 17927 VTKARLTDK True NCI_RA007_Epitope_Rep5 1030.61349337078 1030.6123899358602 75.746 2 -1.0766388522561259 0.3310661141948766 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 91263 24430 RLVREELE True PC9_epitope_Rep3 1042.5771078620598 1042.5760099358602 99.296 2 -1.0767137575548853 0.33107051649554387 1.0 ['nc|ENSG00000118762|Q13563-5|PKD2', 'nc|ENSG00000118762|Q13563-3|PKD2', 'ENSG00000118762|ENST00000237596|PKD2', 'ENST00000512858.1_1_4:88986866-88996843:+|nuORF'] 32975 20394 GITFQPLNL True PC9_epitope_Rep6 1001.55458151233 1001.55348993586 91.143 2 -1.0767590638736735 0.33107051649554387 1.0 ['ENST00000334351.7_1_1:24287951-24288053:+|nuORF'] 125641 20230 VMKKCRKL True NCI_RA007_Epitope_Rep2 1004.5987123371199 1004.59760993586 83.721 2 -1.0767858021315044 0.33107491856677523 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2', 'nc|ENSG00000117479|O60779-2|SLC19A2'] 83259 11555 QADVDHDFV True H1975_Epitope_Rep2 1044.4512386426 1044.45014993586 49.508 2 -1.0767946169885185 0.33107491856677523 1.0 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP'] 15248 6817 EAGGGGSP True H1975_Epitope_Rep1 630.26091869178 630.26037496793 31.264 1 -1.0768642741195769 0.3310836340894581 1.0 ['nc|ENSG00000117013|P56696-2|KCNQ4', 'ENSG00000117013|ENST00000347132|KCNQ4'] 89289 20950 RELIEQIGRPL True NCI_RA007_Epitope_Rep4 1322.7670338900598 1322.7653849037902 90.789 3 -1.0769455350368409 0.3310923493850323 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF'] 72911 5163 NAYNSRYWNN True NCI_RA007_Epitope_Rep1 1300.5584976757998 1300.55740993586 24.165 2 -1.077027335019037 0.33116620848696465 1.0 ['IGSF11|p.S323N|1|0.13|ENSG00000144847|chr3:118902848-118902848|C/T|missense_variant'] 44991 5846 IQKFFLMF True PC9_epitope_Rep3 1072.5779598092 1072.57686993586 27.553 2 -1.0770564309936488 0.33116637788402664 1.0 ['ENST00000326361.7_2_3:179051926-179052001:+|nuORF'] 49305 16112 KHRNIVQYL True PC9_epitope_Rep4 1169.66692592597 1169.66527490379 69.912 3 -1.0770634154312744 0.33116637788402664 1.0 ['ENSG00000180815|ENST00000338883|MAP3K15', 'nc|ENSG00000180815|Q6ZN16-2|MAP3K15', 'nc|ENSG00000180815|Q6ZN16-3|MAP3K15', 'ENST00000518578.5_1_X:19378869-19431499:-|nuORF'] 57748 9406 LENQNSLL True H1975_Epitope_Rep3 929.4818104948899 929.48070993586 41.18 2 -1.0770948618691532 0.33116637788402664 1.0 ['ENSG00000112394|ENST00000368851|SLC16A10'] 43814 14266 IKMTHRHSP True H1975_Epitope_Rep3 1105.5814820498501 1105.58038993586 60.216 2 -1.0771426732851996 0.33116637788402664 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 12633 6258 DLEFEEDQR True NCI_RA007_Epitope_Rep4 1179.5043964142699 1179.50328993586 30.675 2 -1.0771490091385307 0.33116637788402664 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 56632 8596 LDYVDLYIIE True NCI_RA007_Epitope_Rep5 1254.6383707059397 1254.63726993586 39.742 2 -1.0771569001540793 0.33116637788402664 1.0 ['nc|ENSG00000122787|P51857-3|AKR1D1', 'nc|ENSG00000122787|P51857-2|AKR1D1', 'ENSG00000122787|ENST00000242375|AKR1D1'] 10752 9006 CYCLTVQRKY True PC9_epitope_Rep5 1275.61039921963 1275.60874490379 39.587 3 -1.0771598498448411 0.33117077682677404 1.0 ['ENST00000505658.5_1_17:48828064-48828295:+|nuORF'] 32058 8946 GEVRIWDL True PC9_epitope_Rep5 986.5185303567798 986.51742993586 39.354 2 -1.0771730286805543 0.33117077682677404 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-3|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'AMBRA1|p.W132Cfs*22|1|0.22|ENSG00000110497|chr11:46545759-46545759|C/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-6|AMBRA1', 'ENST00000524783.1_1_11:46568623-46568797:-|nuORF'] 74935 11964 NLTALGLNL True PC9_epitope_Rep4 927.5389314481899 927.53782993586 53.813 2 -1.0772090404853498 0.33120122975912875 1.0 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000427397.5_1_2:216176945-216197107:+|nuORF', 'ENST00000488712.5_1_2:216176805-216189903:+|nuORF'] 63728 10176 LPQVKPET True PC9_epitope_Rep1 910.5123823471799 910.51128993586 44.018 2 -1.077246699843185 0.33120122975912875 1.0 ['ENST00000467731.1_1_21:33057290-33073360:-|nuORF', 'nc|ENSG00000156304|O95104-2|SCAF4', 'nc|ENSG00000156304|O95104-3|SCAF4', 'ENSG00000156304|ENST00000286835|SCAF4'] 32832 18918 GIGLSVLVIM True PC9_epitope_Rep4 1000.5990891765999 1000.59798993586 80.855 2 -1.0772674408863212 0.33120562756464533 1.0 ['nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2'] 104683 7178 STAIGARPP True PC9_epitope_Rep1 868.4766655448 868.47556993586 32.421 2 -1.077289090187851 0.33120562756464533 1.0 ['ENST00000417355.1_1_2:220163779-220168768:+|nuORF'] 8436 7680 ATSALEHTVP True NCI_RA007_Epitope_Rep4 1024.5189242796 1024.5178299358602 36.204 2 -1.0773118304426548 0.3312143396816299 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 45838 7716 ISQAQATVPPA True NCI_RA007_Epitope_Rep2 1081.5767735088898 1081.57566993586 34.64 2 -1.0774034823117162 0.3312621308635221 1.0 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'nc|ENSG00000141664|Q9C0B9-2|ZCCHC2'] 3548 14728 AGNCLSLPFVE True PC9_epitope_Rep1 1148.55359553616 1148.5524899358602 61.474 2 -1.0774236369050594 0.3312708420175073 1.0 ['ENST00000317025.12_1_8:38205157-38205202:-|nuORF'] 120685 10394 VGAPSPAISL True NCI_RA007_Epitope_Rep4 910.51238234718 910.5118349679301 46.834 1 -1.0774580317066187 0.3312795529445479 1.0 ['ENSG00000142959|ENST00000372207|BEST4'] 96882 7811 SESYVPELQ True H1975_Epitope_Rep2 1050.48695544498 1050.4858499358602 34.992 2 -1.0775405973654801 0.33128826364465286 1.0 ['ENSG00000101346|ENST00000375749|POFUT1'] 4547 19013 AKVIRSLHGR True NCI_RA007_Epitope_Rep1 1135.69380938015 1135.6927099358602 78.097 2 -1.0776213794353318 0.33128850336680604 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 131411 836 VVTKEKLLLE True PC9_epitope_Rep2 1170.72237511342 1170.72073490379 4.7466 3 -1.077669755742128 0.33128850336680604 1.0 ['ENST00000376598.2_2_9:80863756-80866847:+|nuORF'] 137460 11021 YLPDLSPGD True H1975_Epitope_Rep3 975.45492704071 975.4543749679301 47.481 1 -1.0776823278662486 0.33128850336680604 1.0 ['ENST00000471105.5_1_1:201965436-201974841:+|nuORF', 'ENSG00000176393|ENST00000295640|RNPEP'] 129603 7051 VTGRLGVPP True H1975_Epitope_Rep3 894.5287011176598 894.52760993586 32.087 2 -1.077710436572876 0.33128850336680604 1.0 ['ENST00000562374.1_3_16:75656785-75656947:-|nuORF'] 124880 16587 VLLMIPFP True H1975_Epitope_Rep2 928.54559705176 928.54448993586 69.027 2 -1.0777108877135966 0.33128850336680604 1.0 ['ENSG00000181009|ENST00000641181|OR52N5'] 64381 14861 LQQFKSPL True PC9_epitope_Rep5 959.5440168286299 959.54290993586 62.166 2 -1.077725921459483 0.33128850336680604 1.0 ['ENSG00000025796|ENST00000369002|SEC63'] 100376 20991 SLNKRESVI True PC9_epitope_Rep4 1044.5927579262 1044.5916699358602 88.902 2 -1.0777453417053355 0.33128850336680604 1.0 ['PEG3|p.K503Nfs*76|1|0.21|ENSG00000198300|chr19:56816936-56816936|C/-|frameshift_variant', 'nc|ENSG00000198300|Q9GZU2-3|PEG3', 'nc|ENSG00000198300|Q9GZU2-2|PEG3', 'nc|ENSG00000198300|Q9GZU2-4|PEG3', 'ENSG00000198300|ENST00000326441|PEG3'] 139479 6200 YTGGVTGM True NCI_RA007_Epitope_Rep2 784.34254014076 784.3419949679301 28.724 1 -1.0777644877873316 0.33128850336680604 1.0 ['nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 73102 8279 NDRGSVFP True NCI_RA007_Epitope_Rep1 890.4246299719399 890.42352993586 36.203 2 -1.0777735160925 0.33128850336680604 1.0 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF'] 60362 12115 LIICNAIIDPL True H1975_Epitope_Rep3 1196.6838814297198 1196.68278993586 51.765 2 -1.0777997181211827 0.33128858326170196 1.0 ['ENSG00000258839|ENST00000555147|MC1R'] 84032 10403 QEPESGKVVQ True H1975_Epitope_Rep1 1099.5509526838698 1099.5503749679299 44.964 1 -1.077826975325854 0.33128858326170196 1.0 ['nc|ENSG00000186868|P10636|MAPT', 'nc|ENSG00000186868|P10636-9|MAPT'] 125089 25713 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 103.95 3 -1.0778325872293868 0.33128858326170196 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 135922 18169 YEVFDPTRP True PC9_epitope_Rep1 1122.53457434374 1122.53346993586 74.677 2 -1.077862409917406 0.33129297770368826 1.0 ['nc|ENSG00000154027|Q9Y6K8-3|AK5', 'ENSG00000154027|ENST00000354567|AK5', 'ENST00000466114.1_1_1:77759479-77763674:+|nuORF', 'ENST00000317704.8_1_1:77747869-77779575:+|nuORF'] 129714 17923 VTKARLTDK True NCI_RA007_Epitope_Rep4 1030.61349337078 1030.6123899358602 77.563 2 -1.0778723444271892 0.33129297770368826 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 93241 23695 RRRRRRSRERR True PC9_epitope_Rep5 1638.9951853883397 1638.9935249037903 96.121 3 -1.077941253368732 0.33131039512411115 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 109169 7367 TFQLRDLSP True NCI_RA007_Epitope_Rep1 1075.56620882519 1075.5651099358602 32.65 2 -1.0779610941382718 0.33131039512411115 1.0 ['ENST00000482273.1_1_21:38269069-38269306:-|nuORF'] 121495 5247 VGKGCGHF True PC9_epitope_Rep4 803.3748433285499 803.37374993586 26.882 2 -1.078044145987168 0.3313321265318348 1.0 ['ENST00000572919.1_3_17:3488830-3495572:-|nuORF'] 18921 9695 ELERRFKQQRY True PC9_epitope_Rep6 1551.82700837767 1551.8253749037901 47.68 3 -1.0780711437702142 0.3313408345053915 1.0 ['ENSG00000119919|ENST00000344586|NKX2-3', 'ENSG00000183072|ENST00000329198|NKX2-5'] 114324 15461 TSCLMRHLYR True PC9_epitope_Rep5 1278.63253164654 1278.63142993586 64.481 2 -1.0781094716461848 0.33137558764927266 1.0 ['ZBED4|p.F1004Cfs*23|1|0.09|ENSG00000100426|chr22:49886671-49886680|CTTCGCCACG/-|frameshift_variant', 'ZBED4|p.S1127Kfs*14|1|0.22|ENSG00000100426|chr22:49887033-49887034|-/C|frameshift_variant', 'ZBED4|p.H1096Lfs*3|2|0.34|ENSG00000100426|chr22:49886949-49886951|ACA/T|frameshift_variant', 'ENSG00000100426|ENST00000216268|ZBED4'] 96815 9062 SESFRFSGL True H1975_Epitope_Rep2 1028.4927095317598 1028.4916099358602 39.81 2 -1.0781202221841568 0.331384294830056 1.0 ['ENST00000409936.5_2_2:44587175-44588600:-|nuORF', 'ENST00000410081.5_2_2:44586875-44588600:-|nuORF', 'ENST00000409411.5_3_2:44573515-44588600:-|nuORF', 'ENST00000438314.1_3_2:44587786-44588600:-|nuORF'] 60986 6986 LLAKETKEI True NCI_RA007_Epitope_Rep5 1043.62266107215 1043.6215699358602 33.553 2 -1.0781753467116901 0.3313930017840632 1.0 ['nc|ENSG00000183837|Q9UL41-2|PNMA3'] 58334 7361 LETTGTSLP True PC9_epitope_Rep2 917.47057710485 917.46948993586 33.696 2 -1.0782409867170362 0.3314191212855171 1.0 ['ENSG00000136014|ENST00000258499|USP44'] 16291 10538 EEILDGNDEKY True NCI_RA007_Epitope_Rep2 1323.58304065779 1323.5819499358602 45.586 2 -1.0782598323994275 0.3314191212855171 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1', 'ENST00000491967.1_1_22:24135798-24143581:+|nuORF'] 121159 17824 VGGHCRGP True PC9_epitope_Rep1 781.3653412740099 781.36424993586 73.353 2 -1.0783422591506568 0.3314191212855171 1.0 ['ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 62357 14757 LLRMHRQFMRR True H1975_Epitope_Rep3 1542.8500098350598 1542.84890993586 62.141 2 -1.0783482265307052 0.3314279017682752 1.0 ['ENSG00000171522|ENST00000302472|PTGER4'] 43329 17346 IHFQEKEI True PC9_epitope_Rep1 1042.54474510462 1042.54364993586 71.534 2 -1.0783596483903444 0.3314279017682752 1.0 ['nc|ENSG00000150676|Q8IWF9-3|CCDC83', 'ENSG00000150676|ENST00000342404|CCDC83', 'nc|ENSG00000150676|Q8IWF9-2|CCDC83'] 44451 4538 INLKGEAQP True PC9_epitope_Rep5 968.5290950404799 968.52798993586 22.522 2 -1.0783696445988016 0.3314279017682752 1.0 ['ENSG00000251322|ENST00000262795|SHANK3', 'nc|ENSG00000251322|Q9BYB0-3|SHANK3', 'ENST00000414786.6_1_22:51113069-51169737:+|nuORF', 'nc|ENSG00000251322|Q9BYB0|SHANK3', 'SHANK3|p.G508Afs*16|1|0.35|ENSG00000251322|chr22:50698734-50698734|G/-|frameshift_variant'] 127266 19272 VQLAQKEQELA True PC9_epitope_Rep4 1255.67721582615 1255.67610993586 82.234 2 -1.078384873565077 0.3314279017682752 1.0 ['nc|ENSG00000189337|Q674X7-4|KAZN', 'nc|ENSG00000189337|Q674X7-3|KAZN', 'nc|ENSG00000189337|Q674X7-5|KAZN', 'nc|ENSG00000189337|Q674X7-2|KAZN', 'ENST00000491547.1_1_1:14925349-15387014:+|nuORF', 'ENSG00000189337|ENST00000376030|KAZN'] 131052 11168 VVLNLDTT True NCI_RA007_Epitope_Rep5 873.4807478657301 873.47964993586 49.593 2 -1.0784348396051384 0.33143229166666666 1.0 ['ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6'] 393 5968 AALFMTLK True PC9_epitope_Rep2 893.50446051577 893.50336993586 28.343 2 -1.0784365064565558 0.33143229166666666 1.0 ['ITM2A|p.I141Lfs*9|1|0.32|ENSG00000078596|chrX:79362962-79362962|T/-|frameshift_variant'] 42043 8676 IEEARQKA True H1975_Epitope_Rep1 943.50869394907 943.50758993586 38.302 2 -1.0784453624358585 0.33144099686202 1.0 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant'] 33255 11849 GLALETSLSL True PC9_epitope_Rep6 1002.55972646242 1002.55862993586 56.784 2 -1.0784594249193364 0.3314540909327639 1.0 ['ENST00000341567.8_1_7:66422490-66422589:+|nuORF'] 3460 4012 AGLLAPLGG True NCI_RA007_Epitope_Rep5 767.45413919507 767.45304993586 21.828 2 -1.0784788035707775 0.3314540909327639 1.0 ['ENSG00000205922|ENST00000382349|ONECUT3'] 48139 26535 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 110.79 3 -1.0785074333340148 0.3314540909327639 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 17914 12756 EIDRRLEKKLK True H1975_Epitope_Rep3 1426.8619969040599 1426.86088993586 54.279 2 -1.0785480482410357 0.33147149962242534 1.0 ['nc|ENSG00000055070|Q7Z422-5|SZRD1', 'ENSG00000055070|ENST00000401088|SZRD1', 'ENST00000472461.1_1_1:16694381-16721632:+|nuORF'] 5812 24305 APFLHPTA True PC9_epitope_Rep3 852.4493881678 852.44828993586 98.803 2 -1.078613093410494 0.33147149962242534 1.0 ['ENSG00000166268|ENST00000552032|MYRFL'] 13223 12659 DLTQKREL True PC9_epitope_Rep6 1001.55055876105 1001.54946993586 60.159 2 -1.0786650116370466 0.3314976109570493 1.0 ['ENSG00000112561|ENST00000373033|TFEB', 'nc|ENSG00000112561|P19484-2|TFEB'] 73604 7970 NGFPQSDPAP True H1975_Epitope_Rep3 1028.4563240230398 1028.4552299358602 35.628 2 -1.078670497601639 0.3314976109570493 1.0 ['nc|ENSG00000249948|Q9H227|GBA3'] 45437 8690 ISDYVTGNK True H1975_Epitope_Rep3 995.49237517859 995.49126993586 38.425 2 -1.0787041766167687 0.3314976109570493 1.0 ['nc|ENSG00000127870|Q9Y252-2|RNF6', 'ENSG00000127870|ENST00000381588|RNF6'] 55351 7383 LASKDREIL True PC9_epitope_Rep4 1043.59750895347 1043.59640993586 35.739 2 -1.0788972127147043 0.3315063142819945 1.0 ['CUX2|p.S1155Afs*9|1|0.34|ENSG00000111249|chr12:111341853-111341853|C/-|frameshift_variant', 'ENSG00000111249|ENST00000261726|CUX2'] 33498 14885 GLGVCPQD True NCI_RA007_Epitope_Rep5 787.35343917763 787.35234993586 63.924 2 -1.078935958970768 0.33151070145289796 1.0 ['ENST00000595692.1_1_19:7679981-7682940:+|nuORF'] 16018 9207 EEAERLTTEEQ True H1975_Epitope_Rep1 1333.5997533510902 1333.59864993586 40.323 2 -1.0789376041410066 0.33151070145289796 1.0 ['ENSG00000121634|ENST00000369235|GJA8'] 84389 7290 QGEDLAHVQH True PC9_epitope_Rep2 1132.52613491836 1132.5250299358602 33.427 2 -1.0790390162480035 0.33153680921694983 1.0 ['ENSG00000171729|ENST00000376008|TMEM51'] 80551 16130 PLLVSGIG True PC9_epitope_Rep2 754.45889022234 754.4583449679301 67.301 1 -1.0790417565530581 0.33153680921694983 1.0 ['ENST00000487805.6_1_3:49728598-49737610:+|nuORF'] 124503 11368 VLFHQKKN True PC9_epitope_Rep6 1012.5817993196799 1012.58070993586 54.773 2 -1.0790791277966012 0.33153680921694983 1.0 ['ENST00000444720.1_1_13:21321226-21321529:-|nuORF'] 19397 13006 ELPERWETTKK True H1975_Epitope_Rep1 1415.7408787118695 1415.73978993586 55.11 2 -1.0790982806885936 0.33155852947302644 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 24033 18407 EYQCQNLYQL True PC9_epitope_Rep5 1300.57578753272 1300.57468993586 75.823 2 -1.079147646805097 0.3315802491635966 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'nc|ENSG00000080910|P36980-2|CFHR2', 'ENSG00000080910|ENST00000367415|CFHR2', 'ENSG00000244414|ENST00000320493|CFHR1', 'CFHR2|p.E185Q|1|0.39|ENSG00000080910|chr1:196958013-196958013|G/C|missense_variant'] 19536 12840 ELQRENDLL True PC9_epitope_Rep1 1128.5775017848798 1128.57640993586 54.263 2 -1.0791617722074662 0.33158895050639176 1.0 ['ENSG00000187672|ENST00000288221|ERC2'] 37032 17445 GVSAWITINF True PC9_epitope_Rep6 1106.5760452329 1106.57494993586 79.719 2 -1.0791686222066508 0.33159765162264543 1.0 ['nc|ENSG00000197586|O75354-2|ENTPD6', 'nc|ENSG00000197586|O75354-3|ENTPD6', 'ENSG00000197586|ENST00000376652|ENTPD6'] 65137 12097 LSDQQDEERRR True NCI_RA007_Epitope_Rep1 1430.68621737006 1430.68512993586 51.043 2 -1.079205161500365 0.3316063525123666 1.0 ['ENSG00000115504|ENST00000431489|EHBP1', 'nc|ENSG00000115504|Q8NDI1-2|EHBP1', 'nc|ENSG00000115504|Q8NDI1|EHBP1'] 98048 7960 SHTRQYLTPP True NCI_RA007_Epitope_Rep2 1198.6094706195001 1198.60836993586 35.594 2 -1.0792317990249225 0.331615053175564 1.0 ['ENST00000591991.1_1_19:5666960-5667302:+|nuORF'] 107853 10684 TARLVLPTDA True NCI_RA007_Epitope_Rep1 1055.59750895347 1055.59640993586 45.549 2 -1.0793713657166868 0.33161950381381305 1.0 ['ENSG00000248383|ENST00000253807|PCDHAC1', 'nc|ENSG00000248383|Q9H158-2|PCDHAC1'] 117682 22189 VAKKEPDGI True PC9_epitope_Rep1 955.5338460677498 955.53274993586 90.169 2 -1.0794329190714063 0.33161950381381305 1.0 ['ENSG00000137962|ENST00000260526|ARHGAP29', 'ENST00000482481.1_1_1:94643162-94655618:-|nuORF'] 84468 22746 QGLRGVLQG True PC9_epitope_Rep4 926.5297637468198 926.52866993586 95.711 2 -1.0794385608318882 0.33161950381381305 1.0 ['ENSG00000138080|ENST00000380320|EMILIN1'] 61390 10498 LLEMMEEV True NCI_RA007_Epitope_Rep3 992.4558556408399 992.45474993586 48.355 2 -1.0794510604687957 0.33161950381381305 1.0 ['nc|ENSG00000150712|Q9C0I1-2|MTMR12', 'ENSG00000150712|ENST00000382142|MTMR12', 'nc|ENSG00000150712|Q9C0I1-3|MTMR12'] 134638 22083 WWGGGSAP True NCI_RA007_Epitope_Rep5 816.3554877829599 816.35438993586 92.071 2 -1.0794513201647151 0.33161950381381305 1.0 ['ENST00000409185.5_1_2:131808281-131808602:-|nuORF'] 17573 8840 EHKLQHHKTFR True PC9_epitope_Rep5 1459.77966426243 1459.77802490379 38.946 3 -1.0795238742029456 0.3316412859560068 1.0 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 54652 10954 LADSKQANK True PC9_epitope_Rep3 973.51925863277 973.51816993586 47.115 2 -1.079529605610883 0.3316412859560068 1.0 ['ENSG00000163840|ENST00000296161|DTX3L'] 46474 17450 ITNRYGLLP True PC9_epitope_Rep3 1045.59202965021 1045.59092993586 72.295 2 -1.0795376706457505 0.3316412859560068 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 130231 17819 VTSNAALTLR True NCI_RA007_Epitope_Rep3 1044.5927579262 1044.5916699358602 78.134 2 -1.0795625333053362 0.3316412859560068 1.0 ['ENSG00000154734|ENST00000284984|ADAMTS1'] 35745 12203 GTTLAMHV True PC9_epitope_Rep1 828.4163737873599 828.41526993586 51.797 2 -1.0796874412530202 0.33168903177102993 1.0 ['ENSG00000177409|ENST00000318238|SAMD9L', 'SAMD9L|p.W756C|1|0.09|ENSG00000177409|chr7:93133704-93133704|C/A|missense_variant'] 47065 5779 IVTSSLLG True NCI_RA007_Epitope_Rep5 788.4643695256 788.46326993586 28.915 2 -1.079728716484876 0.3316977301124531 1.0 ['ENST00000590402.1_1_17:66422197-66423441:-|nuORF'] 81978 23594 PSRRVVARIRF True PC9_epitope_Rep4 1355.82622053203 1355.82457490379 99.062 3 -1.0797830274581541 0.3317194434683014 1.0 ['ENST00000372242.7_1_1:45101583-45102057:-|nuORF'] 64923 17309 LSCHCHSC True PC9_epitope_Rep2 888.3040635404002 888.30296993586 71.838 2 -1.0798456593719408 0.3317499154064395 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 5192 10088 ALPPELREQTV True PC9_epitope_Rep5 1251.68230120659 1251.6812099358601 43.786 2 -1.0798589221811299 0.3317499154064395 1.0 ['nc|ENSG00000000460|Q9NSG2-3|FIRRM', 'nc|ENSG00000000460|Q9NSG2-2|FIRRM', 'ENSG00000000460|ENST00000359326|C1orf112', 'ENST00000498289.5_1_1:169773308-169819597:+|nuORF'] 29856 10688 FVWQRYLDY True H1975_Epitope_Rep1 1288.62405805448 1288.62296993586 46.07 2 -1.0798711254985638 0.3317499154064395 1.0 ['MAGEE1|p.L787*|2|0.23|ENSG00000198934|chrX:76430288-76430288|C/-|frameshift_variant', 'ENSG00000198934|ENST00000361470|MAGEE1'] 18196 12454 EIQVGNIIPLF True NCI_RA007_Epitope_Rep1 1241.70197402201 1241.70147496793 52.421 1 -1.0798834250744858 0.3317499154064395 1.0 ['ENST00000488104.1_1_10:111879082-111879346:+|nuORF'] 124015 24915 VKLLLPAAP True NCI_RA007_Epitope_Rep1 920.6058888091999 920.60478993586 103.12 2 -1.0798985993958996 0.3317499154064395 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000358849.8_1_7:150725553-150730697:+|nuORF', 'ENST00000297504.10_1_7:150725553-150728339:+|nuORF', 'ENST00000462605.5_1_7:150725553-150729984:+|nuORF', 'ENST00000461373.5_1_7:150725553-150725944:+|nuORF', 'ENST00000466514.5_1_7:150725553-150731828:+|nuORF'] 123738 11198 VIRGGATR True NCI_RA007_Epitope_Rep5 828.49298431528 828.49188993586 49.707 2 -1.0799506970792934 0.33175861216309427 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 60953 8903 LLAEEENGN True H1975_Epitope_Rep3 987.45090428943 987.44980993586 39.244 2 -1.080010797445742 0.33181072850784726 1.0 ['ENST00000496961.5_1_1:110038754-110038895:+|nuORF'] 120884 9943 VGDVILEVNGY True NCI_RA007_Epitope_Rep3 1176.60265390356 1176.60100490379 46.192 3 -1.0800242751987328 0.33181072850784726 1.0 ['nc|ENSG00000172367|Q86UT5-3|NHERF4', 'ENSG00000172367|ENST00000355547|NHERF4', 'nc|ENSG00000172367|Q86UT5|NHERF4'] 42488 9038 IERHPVDI True PC9_epitope_Rep3 977.5294293936498 977.52832993586 39.707 2 -1.080036179937153 0.33181072850784726 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B', 'ENST00000588166.1_1_19:5135556-5138314:+|nuORF'] 83117 6963 PYPGLSTVP True H1975_Epitope_Rep3 929.48583324617 929.48472993586 31.744 2 -1.0800857234438614 0.3318151059288949 1.0 ['ENSG00000171872|ENST00000372299|KLF17', 'KLF17|p.P194Rfs*40|1|0.24|ENSG00000171872|chr1:44129850-44129850|C/-|frameshift_variant'] 78319 5596 PASPATAAP True PC9_epitope_Rep4 781.39701824177 781.39592993586 28.31 2 -1.0801010515858627 0.3318151059288949 1.0 ['ENSG00000183770|ENST00000648323|FOXL2'] 80528 18926 PLLQAHHA True PC9_epitope_Rep1 885.48208527841 885.48098993586 77.583 2 -1.080117440080615 0.3318368143665821 1.0 ['ENSG00000006831|ENST00000357103|ADIPOR2'] 27504 8230 FPERALAAELP True NCI_RA007_Epitope_Rep2 1212.6502728023197 1212.64916993586 36.65 2 -1.0801508030469187 0.33183693120453867 1.0 ['ENST00000337554.7_1_22:43547558-43555226:+|nuORF'] 131312 24588 VVQVIKLA True NCI_RA007_Epitope_Rep3 868.5745886809199 868.57348993586 106.35 2 -1.080186112015157 0.33183693120453867 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 47291 21012 IYFLRENMLL True PC9_epitope_Rep4 1310.7056795034598 1310.7045899358602 88.983 2 -1.0801863664416276 0.33183693120453867 1.0 ['ENST00000583497.1_1_18:1159162-1174680:+|nuORF'] 100430 7497 SLPEEDTK True PC9_epitope_Rep5 917.43419159613 917.43308993586 33.787 2 -1.0802477188787099 0.33183693120453867 1.0 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1', 'nc|ENSG00000177628|P04062-3|GBA1', 'ENST00000566701.5_1_1:155184905-155187601:-|nuORF', 'ENST00000486197.5_1_1:155184905-155187358:-|nuORF', 'ENST00000473223.5_1_1:155184463-155187072:-|nuORF', 'ENST00000459805.5_1_1:155186646-155187358:-|nuORF', 'ENST00000460156.1_1_1:155207923-155208412:-|nuORF'] 110908 15282 TLAPGPRLAL True PC9_epitope_Rep5 1007.6127650947899 1007.61166993586 63.791 2 -1.0802698504538113 0.33183693120453867 1.0 ['ENST00000485230.5_2_3:112930474-112968600:+|nuORF', 'ENST00000495514.5_2_3:112930393-112968640:+|nuORF'] 32911 14556 GIPANRIVL True PC9_epitope_Rep4 951.5865503469499 951.58544993586 63.903 2 -1.0802743827247878 0.33183693120453867 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 114765 14647 TSWTTASGVGP True H1975_Epitope_Rep1 1062.4981888350198 1062.49708993586 61.552 2 -1.0803122273271892 0.3318413074310697 1.0 ['NOTCH1|p.D1267Mfs*178|1|0.6|ENSG00000148400|chr9:136506818-136506818|C/-|frameshift_variant'] 122391 10463 VGSGIQPL True PC9_epitope_Rep1 769.43340375049 769.43230993586 45.134 2 -1.0803339000439764 0.3318413074310697 1.0 ['nc|ENSG00000015520|Q9UHC9-2|NPC1L1', 'ENSG00000015520|ENST00000381160|NPC1L1', 'nc|ENSG00000015520|Q9UHC9|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-4|NPC1L1', 'nc|ENSG00000015520|Q9UHC9-3|NPC1L1', 'NPC1L1|p.Q227H|1|0.24|ENSG00000015520|chr7:44539716-44539716|C/A|missense_variant'] 87992 13374 QVRRLMPVDMI True NCI_RA007_Epitope_Rep1 1356.7369967150798 1356.73588993586 56.025 2 -1.0803511349639312 0.33185000130116843 1.0 ['ENSG00000128519|ENST00000249284|TAS2R16'] 97041 11107 SEWQLVKVYYK True H1975_Epitope_Rep3 1441.7605515272896 1441.7594499358602 47.816 2 -1.0803974476635718 0.3318717064602173 1.0 ['SORCS1|p.D664Y|1|0.51|ENSG00000108018|chr10:106672936-106672936|C/A|missense_variant'] 20100 17600 ENIPAVVIE True PC9_epitope_Rep6 982.53351171458 982.53240993586 80.34 2 -1.0804054504584593 0.3318803997085458 1.0 ['ENSG00000170385|ENST00000367001|SLC30A1'] 26482 4918 FIQQCQFFFYN True NCI_RA007_Epitope_Rep1 1483.65945758703 1483.65781490379 23.211 3 -1.080446768496743 0.33194113743705844 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55005616-55005874:+|nuORF'] 123570 12867 VIIQQAVPSP True PC9_epitope_Rep3 1050.6073453611798 1050.6062499358602 54.512 2 -1.0804669707457044 0.3319455106103384 1.0 ['nc|ENSG00000115966|P15336-3|ATF2', 'nc|ENSG00000115966|P15336-7|ATF2', 'nc|ENSG00000115966|P15336-4|ATF2', 'nc|ENSG00000115966|P15336-5|ATF2', 'ENSG00000115966|ENST00000264110|ATF2'] 93879 7615 RVGWDAEYAR True PC9_epitope_Rep1 1221.58906952809 1221.58741490379 34.111 3 -1.0805103192416168 0.3319455106103384 1.0 ['ENST00000274031.7_1_4:140477471-140477915:-|nuORF'] 18801 16710 ELDVATLQENI True PC9_epitope_Rep5 1243.62959692739 1243.6284899358602 69.281 2 -1.0805386767639649 0.3319542024460057 1.0 ['ENSG00000158163|ENST00000327532|DZIP1L', 'nc|ENSG00000158163|Q8IYY4-2|DZIP1L'] 85551 18012 QLLEIFNSGI True PC9_epitope_Rep6 1132.61282466444 1132.61172993586 81.91 2 -1.0805498965078646 0.3319715854388384 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 101457 8023 SNNKTKHIEEE True PC9_epitope_Rep1 1327.63680756615 1327.6357099358602 35.681 2 -1.0805817233005237 0.3319715854388384 1.0 ['ENSG00000173702|ENST00000616727|MUC13'] 55929 8018 LDGYVSQLKSV True NCI_RA007_Epitope_Rep3 1207.6448530687098 1207.64320490379 38.632 3 -1.0805855188888465 0.3319802765960215 1.0 ['ENSG00000069248|ENST00000261396|NUP133'] 101424 4541 SNNDDDED True H1975_Epitope_Rep1 922.27881315354 922.27770993586 22.494 2 -1.0806504497793095 0.3320279975020816 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 73133 10233 NEARKKFWQ True NCI_RA007_Epitope_Rep4 1205.63054041725 1205.62888490379 46.218 3 -1.0807079508265671 0.33205838732339393 1.0 ['ENSG00000142178|ENST00000270162|SIK1'] 12389 11933 DKDKEKDRDRD True H1975_Epitope_Rep3 1418.67498398002 1418.6738899358602 51.055 2 -1.080721736150094 0.33205838732339393 1.0 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF', 'RERE|p.D360Gfs*12|1|0.28|ENSG00000142599|chr1:8495088-8495089|-/C|frameshift_variant'] 15676 12263 ECKECQKFFRR True PC9_epitope_Rep4 1472.7016738355198 1472.7005699358601 54.987 2 -1.0807407431883849 0.3320670768990594 1.0 ['ENSG00000120784|ENST00000684514|ZFP30'] 93191 21862 RRRRRKKARGP True H1975_Epitope_Rep2 1435.9184982074298 1435.9174099358602 90.406 2 -1.0807463746982648 0.332075766248634 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 85842 27768 QMTNDDIKRIG True PC9_epitope_Rep5 1289.6397847716098 1289.63812490379 114.33 3 -1.0807795624414527 0.33209746451755584 1.0 ['ENSG00000142627|ENST00000358432|EPHA2'] 115720 13572 TVLGERHLP True PC9_epitope_Rep2 1020.5716285588001 1020.57052993586 57.498 2 -1.0808168682263302 0.33210615324573955 1.0 ['ENSG00000197417|ENST00000225519|SHPK'] 90856 3633 RKWMRRKMGK True PC9_epitope_Rep4 1375.7805332929095 1375.7788949037902 20.09 3 -1.080835041767423 0.33211052138620045 1.0 ['nc|ENSG00000214595|Q6ZMW3-2|EML6', 'ENST00000490828.5_1_2:55184973-55193987:+|nuORF'] 111321 16885 TLHWSFLL True PC9_epitope_Rep2 1015.5491022090699 1015.54800993586 70.195 2 -1.0808483871809387 0.33211052138620045 1.0 ['ENST00000579809.1_1_17:77080425-77082428:+|nuORF', 'ENST00000300682.14_2_17:77078803-77082428:+|nuORF', 'ENSG00000167280|ENST00000579016|ENGASE'] 98612 12530 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.5514749679298 53.24 1 -1.0808859782429108 0.33213221807396615 1.0 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 86714 16913 QRIRVHANL True H1975_Epitope_Rep2 1105.64685918773 1105.64576993586 70.302 2 -1.0809513410242784 0.3321409058979629 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'ENST00000512413.1_1_5:115357396-115361812:+|nuORF'] 68156 12629 LTPRPAIAP True PC9_epitope_Rep1 934.5600012459398 934.55890993586 53.447 2 -1.0809553662922442 0.3321452729070191 1.0 ['ENST00000590444.5_1_19:6475849-6475978:-|nuORF', 'ENST00000590818.5_1_19:6475623-6475978:-|nuORF'] 84404 7200 QGEVTVASIDD True PC9_epitope_Rep2 1132.52479750568 1132.52370993586 33.086 2 -1.0809824517021014 0.3321452729070191 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 121836 14259 VGNLRLLF True PC9_epitope_Rep3 930.5650866263799 930.5645349679301 59.933 1 -1.0810546411736612 0.3322146778011915 1.0 ['CACNA1G|p.G1747R|1|0.17|ENSG00000006283|chr17:50618060-50618060|G/A|missense_variant'] 29951 9876 FWWWQDNWLWH True NCI_RA007_Epitope_Rep2 1702.7469671518197 1702.7458699358601 43.041 2 -1.0810570202596235 0.3322146778011915 1.0 ['ENST00000431490.1_1_3:45201441-45201549:-|nuORF'] 85153 11034 QIWVEKYYFRL True H1975_Epitope_Rep3 1543.8187351097497 1543.8170849037901 47.532 3 -1.0811070952139485 0.33223204994797084 1.0 ['ENST00000531389.2_1_12:122991779-122992905:-|nuORF'] 130915 7005 VVHTRERP True NCI_RA007_Epitope_Rep2 992.5515618205599 992.55046993586 31.87 2 -1.081109255471075 0.33223204994797084 1.0 ['ENSG00000261221|ENST00000568956|ZNF865'] 82490 5748 PVEKREDP True H1975_Epitope_Rep2 968.4927095317598 968.49160993586 27.107 2 -1.0811637529813212 0.33226674991220195 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant', 'KMT2D|p.A3440Vfs*11|1|0.21|ENSG00000167548|chr12:49034848-49034848|G/-|frameshift_variant', 'KMT2D|p.Q3370Pfs*53|2|0.24|ENSG00000167548|chr12:49037247-49037248|-/G|frameshift_variant', 'KMT2D|p.V3089Wfs*30|1|0.39|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant', 'KMT2D|p.R3082Gfs*14|1|0.2|ENSG00000167548|chr12:49038108-49038112|TCCCG/-|frameshift_variant', 'KMT2D|p.R2687Qfs*4|1|0.4|ENSG00000167548|chr12:49039604-49039604|C/-|frameshift_variant', 'KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant'] 67451 12444 LTEDPFFL True PC9_epitope_Rep2 980.4854988929999 980.48440993586 53.171 2 -1.0812253406885044 0.33227111325000325 1.0 ['ENST00000443258.7_1_2:96688488-96688790:+|nuORF', 'ENST00000467292.6_1_2:96688598-96688790:+|nuORF'] 40570 12991 HSTSPAHKYYL True PC9_epitope_Rep2 1302.63568536734 1302.63458993586 55.258 2 -1.081252305497923 0.33227111325000325 1.0 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1'] 117614 13042 VAGYPEDLL True NCI_RA007_Epitope_Rep3 975.49131254943 975.49020993586 58.576 2 -1.0812605171266856 0.33227979813745384 1.0 ['Tigger1_dup3188|chr4:76920080-76921080:-|1.2529691912903969|0.285655789289939|2.13|501.0|15|2|sense'] 36532 13015 GVKRRRLI True NCI_RA007_Epitope_Rep4 996.6668663563198 996.66576993586 57.165 2 -1.0813193932209342 0.3323275021135462 1.0 ['ENSG00000178409|ENST00000369042|BEND3', 'BEND3|p.E692Rfs*21|1|0.12|ENSG00000178409|chr6:107069117-107069118|-/G|frameshift_variant'] 75097 1109 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 6.1433 3 -1.0813789737092203 0.3323448697439099 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 27255 23711 FLWKKKLRQ True NCI_RA007_Epitope_Rep1 1245.7709970716899 1245.7693649037901 97.904 3 -1.0813864290257815 0.3323448697439099 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000545213.5_1_14:24789074-24794639:-|nuORF', 'ENST00000557056.5_1_14:24787624-24791466:-|nuORF'] 110293 19657 TIGSVRWKI True PC9_epitope_Rep1 1058.62366413166 1058.6225699358602 80.436 2 -1.0814498175354685 0.3323752422323089 1.0 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.E981K|1|0.27|ENSG00000162402|chr1:55137892-55137892|C/T|missense_variant'] 33281 13404 GLARYRLI True PC9_epitope_Rep5 960.5868847001199 960.58578993586 56.575 2 -1.0814503839627196 0.3323752422323089 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 45792 11741 ISNVSGKDI True PC9_epitope_Rep2 931.49746055903 931.49636993586 50.495 2 -1.0815201182601524 0.3323969306801925 1.0 ['ENSG00000064313|ENST00000378164|TAF2', 'TAF2|p.S506F|1|0.05|ENSG00000064313|chr8:119789643-119789643|G/A|missense_variant'] 37893 6994 HECQHQLRDQR True H1975_Epitope_Rep1 1448.6691278372798 1448.6680299358602 31.939 2 -1.0815263471931222 0.3324013264841667 1.0 ['nc|ENSG00000169884|O00744-2|WNT10B', 'ENSG00000169884|ENST00000301061|WNT10B'] 40621 20063 HTFAACAVVSL True PC9_epitope_Rep1 1117.55901526977 1117.5579099358602 81.998 2 -1.0815419435365246 0.3324013264841667 1.0 ['ENSG00000095564|ENST00000265990|BTAF1'] 86487 6612 QQWTYEQRKV True NCI_RA007_Epitope_Rep4 1364.6836981889196 1364.68260993586 32.061 2 -1.0815502800708794 0.3324013264841667 1.0 ['ENSG00000105409|ENST00000648268|ATP1A3', 'nc|ENSG00000105409|P13637-2|ATP1A3', 'nc|ENSG00000105409|P13637-3|ATP1A3', 'ENSG00000132681|ENST00000368081|ATP1A4', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENST00000466526.1_1_1:160147295-160152563:+|nuORF', 'nc|ENSG00000132681|Q13733-2|ATP1A4'] 22348 2702 ETEKRQVK True NCI_RA007_Epitope_Rep2 1016.5614577979197 1016.56036993586 14.736 2 -1.0815614814016206 0.3324013264841667 1.0 ['ENST00000502843.5_1_4:15779904-15780093:+|nuORF'] 114622 6589 TSNIRSGKNI True H1975_Epitope_Rep3 1088.59382055536 1088.59272993586 30.298 2 -1.0815712146698866 0.3324013264841667 1.0 ['ENSG00000110318|ENST00000263468|CEP126', 'CEP126|p.Q817P|1|0.4|ENSG00000110318|chr11:101963485-101963485|A/C|missense_variant'] 111287 19772 TLHFENVYGCL True PC9_epitope_Rep1 1294.60160835774 1294.6005099358601 80.88 2 -1.0816588593194851 0.3324360174781523 1.0 ['ENST00000523377.1_1_6:90346782-90346884:-|nuORF'] 36168 3321 GVFHFQLWQ True H1975_Epitope_Rep3 1160.5767139392399 1160.57506490379 17.544 3 -1.0816806279182563 0.3324577031613717 1.0 ['ENSG00000182472|ENST00000328867|CAPN12'] 83384 16113 QARSKKGK True H1975_Epitope_Rep2 901.5457481641299 901.54464993586 67.191 2 -1.0817255036498874 0.3324793882805795 1.0 ['nc|ENSG00000153956|P54289-3|CACNA2D1', 'ENSG00000153956|ENST00000356860|CACNA2D1'] 115340 5849 TVEDLQGK True NCI_RA007_Epitope_Rep3 888.4552613938798 888.45416993586 29.985 2 -1.081755813183748 0.33248374512353707 1.0 ['ENST00000494249.5_1_9:140709863-140710166:+|nuORF'] 26629 28244 FKVWNSYFSL True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 119.4 3 -1.0817574090331579 0.33248374512353707 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 139599 10839 YTQLVWANSFY True H1975_Epitope_Rep1 1390.6557521055797 1390.65464993586 46.653 2 -1.0818165341022863 0.3325184327902108 1.0 ['nc|ENSG00000173401|Q6UWM5-2|GLIPR1L1', 'ENSG00000173401|ENST00000378695|GLIPR1L1'] 90232 12789 RHLTQYHDHHK True H1975_Epitope_Rep1 1470.7228776623003 1470.7217899358602 54.256 2 -1.081889879222016 0.33255747425361487 1.0 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 66972 6792 LTAAAPASP True PC9_epitope_Rep6 797.42831837005 797.4272299358599 34.953 2 -1.0818928007690936 0.33255747425361487 1.0 ['ENSG00000135164|ENST00000331242|DMTF1', 'ENST00000580803.1_1_7:86817463-86822708:+|nuORF', 'ENST00000425406.5_1_7:86817376-86824453:+|nuORF', 'ENST00000547146.6_1_7:86813892-86824453:+|nuORF', 'ENST00000447863.5_1_7:86811523-86824453:+|nuORF', 'nc|ENSG00000135164|Q9Y222-5|DMTF1'] 45648 7568 ISICQVHKNME True H1975_Epitope_Rep1 1300.62677755976 1300.62566993586 34.101 2 -1.0819434813180149 0.33255747425361487 1.0 ['nc|ENSG00000165115|Q86VH2-3|KIF27', 'nc|ENSG00000165115|Q86VH2-2|KIF27', 'ENSG00000165115|ENST00000297814|KIF27'] 118492 12369 VDSKIRVP True PC9_epitope_Rep3 912.5392658013599 912.53816993586 52.607 2 -1.081994578850497 0.33257050723601234 1.0 ['nc|ENSG00000008382|Q8N594-2|MPND', 'nc|ENSG00000008382|Q8N594|MPND', 'ENSG00000008382|ENST00000599840|MPND'] 66924 7855 LSYFSFWWWWW True NCI_RA007_Epitope_Rep1 1692.7554065771997 1692.7543099358602 34.545 2 -1.0819970717077385 0.33257050723601234 1.0 ['ENST00000300134.7_1_12:57504946-57505147:-|nuORF'] 75056 25917 NMERPVRYI True PC9_epitope_Rep4 1176.6073624445198 1176.60571490379 109.44 3 -1.0820468684708973 0.33257050723601234 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 65240 18137 LSEEPILKWYK True PC9_epitope_Rep2 1404.7653025545599 1404.7642099358602 75.067 2 -1.082052745284056 0.3325705369912885 1.0 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 54828 7491 LAFNQKSNLFR True H1975_Epitope_Rep1 1336.7251690780797 1336.7240699358601 33.81 2 -1.0821138163324633 0.3325705369912885 1.0 ['nc|ENSG00000164048|Q86UQ0-2|ZNF589', 'ENSG00000164048|ENST00000354698|ZNF589', 'ENST00000457782.5_1_3:48298389-48310273:+|nuORF', 'nc|ENSG00000164048|Q86UQ0-3|ZNF589'] 64340 11024 LQNRRLFQSLH True NCI_RA007_Epitope_Rep2 1410.7844152896998 1410.7833099358602 47.482 2 -1.0821153295014474 0.3325705369912885 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 134123 5452 WRDEKERHRDR True PC9_epitope_Rep4 1581.7872688240097 1581.78562490379 27.71 3 -1.0821278917548967 0.3325792149367451 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 59602 9393 LGSEIRDSV True PC9_epitope_Rep1 974.50327421546 974.50216993586 40.989 2 -1.082161348747708 0.33258789265654254 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B'] 46061 12875 ISWWIFMHPPQ True NCI_RA007_Epitope_Rep1 1440.7012628293598 1440.70016993586 54.073 2 -1.082196600758959 0.3326095718539129 1.0 ['ENST00000483977.5_1_21:35497749-35514781:+|nuORF'] 26487 19347 FIRELEEALCP True PC9_epitope_Rep2 1318.6591232338599 1318.6580299358602 79.793 2 -1.0823373170884487 0.33263125048755754 1.0 ['ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1', 'nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1'] 16040 10997 EEAIRHDVI True PC9_epitope_Rep4 1080.5563724174801 1080.55526993586 50.077 2 -1.082374634710699 0.33265292855749856 1.0 ['ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant', 'nc|ENSG00000121892|Q29RF7-3|PDS5A', 'nc|ENSG00000083642|Q9NTI5-2|PDS5B', 'PDS5B|p.K1318Nfs*76|1|0.74|ENSG00000083642|chr13:32770442-32770442|A/-|frameshift_variant', 'ENSG00000083642|ENST00000315596|PDS5B', 'nc|ENSG00000083642|Q9NTI5-3|PDS5B', 'ENST00000498550.5_1_13:33222909-33262824:+|nuORF', 'PDS5B|p.P1091Gfs*11|1|0.17|ENSG00000083642|chr13:32758614-32758615|CC/-|frameshift_variant'] 85859 18308 QNFQVLMI True PC9_epitope_Rep3 991.5160878286298 991.51498993586 75.628 2 -1.0824151761066538 0.33266160486764784 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 122068 5615 VGRAPKQA True PC9_epitope_Rep3 825.48208527841 825.48098993586 26.676 2 -1.0824487787729216 0.3326963078523141 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 18010 10688 EIHTVYNREK True H1975_Epitope_Rep1 1287.6571490879098 1287.6560499358602 46.07 2 -1.082477347849482 0.3326963078523141 1.0 ['CNNM4|p.R333H|1|0.25|ENSG00000158158|chr2:96761997-96761997|G/A|missense_variant'] 56833 8991 LEDDGEFYM True PC9_epitope_Rep3 1117.42739196353 1117.42628993586 39.528 2 -1.0824781216163026 0.3326963078523141 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1'] 111724 13471 TLPWEVVMV True PC9_epitope_Rep6 1072.56270366788 1072.5616099358601 63.511 2 -1.082496377837968 0.3326963078523141 1.0 ['nc|ENSG00000135503|P36896-4|ACVR1B'] 66523 14397 LSSERFSEYL True H1975_Epitope_Rep2 1229.5928174958499 1229.59172993586 60.527 2 -1.082524469570619 0.3327179833855514 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 59700 13584 LGTLQFGEL True PC9_epitope_Rep1 976.5229470308799 976.52184993586 57.107 2 -1.0825868061768997 0.33272665817321445 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 97387 14433 SGDFSCGG True NCI_RA007_Epitope_Rep5 728.2435543754799 728.24300496793 62.198 1 -1.082639332129474 0.33273533273533273 1.0 ['nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'ENST00000557958.1_1_19:11200206-11213497:+|nuORF'] 82448 7683 PVDIFYLQSP True PC9_epitope_Rep3 1177.60192562757 1177.60027490379 34.55 3 -1.082693626230337 0.33274400707191515 1.0 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 92066 16233 RPSAPETYDSR True PC9_epitope_Rep5 1277.60002813461 1277.59837490379 67.429 3 -1.0827551282026149 0.3327916802079948 1.0 ['TOGARAM1|p.D34Y|1|0.12|ENSG00000198718|chr14:44962521-44962521|G/T|missense_variant'] 64940 15313 LSCHCHSC True PC9_epitope_Rep6 888.3040635404002 888.30296993586 71.021 2 -1.0827813581575128 0.33280035358656374 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 49266 7683 KHEENEAKLT True H1975_Epitope_Rep1 1197.5989655054498 1197.5978699358602 34.518 2 -1.0828278869709433 0.3328436980033278 1.0 ['ENSG00000102189|ENST00000322349|EEA1'] 34307 6393 GPPSPAQTLR True NCI_RA007_Epitope_Rep3 1022.55089311422 1022.5497899358601 32.15 2 -1.0828498297407467 0.3328436980033278 1.0 ['ENST00000562285.1_1_16:29831087-29841859:+|nuORF', 'ENST00000609618.2_1_16:29831081-29831285:+|nuORF'] 14734 11169 DVTRAIQDFRF True H1975_Epitope_Rep3 1366.6993482530595 1366.69824993586 48.059 2 -1.0829743905725329 0.3329303643619441 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 137456 8985 YLNTDFVSVK True NCI_RA007_Epitope_Rep1 1184.607739284 1184.60664993586 38.95 2 -1.0830207511750876 0.33298670236965594 1.0 ['nc|ENSG00000251192|Q2M3X9-2|ZNF674', 'ENSG00000251192|ENST00000683375|ZNF674', 'nc|ENSG00000251192|Q2M3X9|ZNF674'] 20498 23126 EPTRRYRVWS True PC9_epitope_Rep3 1348.7000169594 1348.69890993586 94.223 2 -1.0830250103244459 0.33298670236965594 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 97877 12992 SHLGTPPA True PC9_epitope_Rep2 778.39735259494 778.39680496793 55.262 1 -1.0831112367783922 0.33302136952113554 1.0 ['nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 117206 9944 TYTFSLEGSG True PC9_epitope_Rep5 1060.47130538084 1060.47020993586 43.223 2 -1.083165725241841 0.3330257103491304 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 2283 6190 AEPQPGSPAAE True PC9_epitope_Rep3 1052.47745339044 1052.47634993586 28.85 2 -1.0831669792411625 0.3330257103491304 1.0 ['ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF', 'ENST00000521713.1_1_7:6179681-6199085:+|nuORF'] 121027 19398 VGFFGSKF True PC9_epitope_Rep4 887.4541391950698 887.45304993586 82.724 2 -1.083171107227903 0.33303437967115096 1.0 ['nc|ENSG00000107099|Q8NF50-2|DOCK8', 'ENSG00000107099|ENST00000432829|DOCK8', 'nc|ENSG00000107099|Q8NF50-4|DOCK8', 'nc|ENSG00000107099|Q8NF50-3|DOCK8'] 97388 14555 SGDFSCGG True NCI_RA007_Epitope_Rep5 728.2435543754799 728.24300496793 62.658 1 -1.0832258326250954 0.3330387199916815 1.0 ['nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'ENST00000557958.1_1_19:11200206-11213497:+|nuORF'] 37646 15056 HAEAFLVRWP True H1975_Epitope_Rep2 1224.6403768249597 1224.63874490379 63.064 3 -1.0832665174760325 0.3330387199916815 1.0 ['ENST00000310389.5_1_5:175798967-175799084:+|nuORF'] 75087 1921 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 10.552 3 -1.0832879982964347 0.3330387429655719 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 35865 22221 GVAAWRRRSSR True PC9_epitope_Rep6 1300.72248373948 1300.72197496793 98.431 1 -1.083354013351956 0.3330387429655719 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|91|3|anti-sense'] 124030 26274 VKMMKLHL True PC9_epitope_Rep5 998.5769142633799 998.57580993586 106.86 2 -1.0833630163710326 0.3330387429655719 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 4559 6880 AKWKDDVQLWL True PC9_epitope_Rep2 1400.7452358163198 1400.7436049037901 31.865 3 -1.0833648547494659 0.3330387429655719 1.0 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF', 'ENST00000579878.1_1_17:30219240-30228646:-|nuORF', 'ENST00000490218.6_1_17:30212004-30222015:-|nuORF'] 84012 14829 QENKPKLVPSQ True PC9_epitope_Rep1 1266.6932002434598 1266.6921099358601 61.859 2 -1.083405213288472 0.3330387429655719 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19', 'nc|ENSG00000166140|Q96K21-3|ZFYVE19'] 99844 10386 SLHARTLS True NCI_RA007_Epitope_Rep5 883.48756458167 883.48701496793 46.577 1 -1.0834184629773547 0.3330387429655719 1.0 ['ENSG00000132823|ENST00000255174|OSER1'] 18477 8628 EKLIKEFQD True NCI_RA007_Epitope_Rep5 1148.607739284 1148.60664993586 39.864 2 -1.083504969698515 0.3330604075691412 1.0 ['nc|ENSG00000159267|P50747|HLCS', 'ENSG00000159267|ENST00000674895|HLCS'] 130861 10904 VVGGYLSP True PC9_epitope_Rep1 790.42250471362 790.42140993586 46.827 2 -1.0836082623312762 0.33306907531353563 1.0 ['ENSG00000100335|ENST00000325301|MIEF1'] 125284 19084 VLRQFRFDP True PC9_epitope_Rep1 1176.64037682496 1176.63926993586 78.197 2 -1.083652187549313 0.33309073895978997 1.0 ['nc|ENSG00000237541|P01909|HLA-DQA1'] 57112 18019 LEENLCYRDF True PC9_epitope_Rep2 1300.5757875327197 1300.57468993586 74.615 2 -1.0836889920524764 0.33311240204296466 1.0 ['ACTR2-TSGA10|1|fusion', 'ENSG00000135951|ENST00000393483|TSGA10'] 79932 12690 PIQLPHVRDC True NCI_RA007_Epitope_Rep3 1176.60736244452 1176.60571490379 57.16 3 -1.0837470459974758 0.33316005614181005 1.0 ['ENST00000270460.10_2_19:56190088-56190187:+|nuORF'] 129786 6964 VTKSKTSP True PC9_epitope_Rep1 846.4810822189 846.47998993586 31.592 2 -1.0837956560756066 0.33316439246263807 1.0 ['ENST00000502249.6_1_4:119435248-119475252:+|nuORF', 'ENSG00000143702|ENST00000366542|CEP170', 'nc|ENSG00000143702|Q5SW79-3|CEP170', 'nc|ENSG00000143702|Q5SW79-2|CEP170'] 118480 7743 VDRRTCVP True NCI_RA007_Epitope_Rep4 944.4861846826799 944.48508993586 36.46 2 -1.0837978368464614 0.33316439246263807 1.0 ['nc|ENSG00000197444|Q9ULD0-3|OGDHL', 'nc|ENSG00000197444|Q9ULD0-2|OGDHL', 'ENSG00000197444|ENST00000374103|OGDHL'] 63297 17660 LPAVLRPL True PC9_epitope_Rep4 877.57492303409 877.57382993586 75.955 2 -1.0838185731958145 0.3331730581798807 1.0 ['ENST00000534806.1_1_19:15226885-15227589:-|nuORF', 'ENST00000533086.5_1_19:15226645-15227634:-|nuORF'] 121993 12709 VGQESPSALP True PC9_epitope_Rep6 983.4923751785899 983.49126993586 60.363 2 -1.0839099142402053 0.33322937377360207 1.0 ['ENST00000546727.5_1_12:113545343-113557136:-|nuORF'] 2269 19854 AEPGHTQRKD True PC9_epitope_Rep5 1137.55268401937 1137.5515899358602 81.418 2 -1.0839114758563215 0.33322937377360207 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 60811 22582 LKKHQIIHLE True PC9_epitope_Rep6 1257.7557409303697 1257.75409490379 99.889 3 -1.0839455572255572 0.3332293818786627 1.0 ['nc|ENSG00000204604|Q5VIY5-2|ZNF468', 'ENSG00000204604|ENST00000595646|ZNF468'] 124026 25525 VKMMKLHL True PC9_epitope_Rep1 998.5769142633799 998.57580993586 103.18 2 -1.0839537460088935 0.3332293818786627 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 18605 14181 ELAGFQRDL True PC9_epitope_Rep4 1047.53490869691 1047.53380993586 62.45 2 -1.083967824171555 0.3332293818786627 1.0 ['ENSG00000198911|ENST00000361204|SREBF2'] 111596 9574 TLNLLANPFN True H1975_Epitope_Rep3 1115.59750895347 1115.59640993586 41.836 2 -1.0839690277979086 0.3332293818786627 1.0 ['ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2', 'nc|ENSG00000187122|O75093-2|SLIT1', 'ENSG00000187122|ENST00000266058|SLIT1'] 124029 25620 VKMMKLHL True PC9_epitope_Rep5 998.5769142633799 998.57580993586 103.88 2 -1.0839866927096788 0.3332293818786627 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 88636 22573 RARNEALRLKK True H1975_Epitope_Rep3 1353.8316998352896 1353.8300549037901 94.348 3 -1.0839946198273913 0.3332293818786627 1.0 ['ENSG00000078814|ENST00000262873|MYH7B', 'nc|ENSG00000078814|A7E2Y1|MYH7B'] 51837 23809 KKKRQRFESRS True PC9_epitope_Rep1 1448.8324281112798 1448.8307849037901 96.378 3 -1.084011420578375 0.3332380457380457 1.0 ['PRPF40A|p.S863F|1|0.33|ENSG00000196504|chr2:152659283-152659283|G/A|missense_variant'] 124028 25543 VKMMKLHL True PC9_epitope_Rep5 998.5769142633799 998.57580993586 103.53 2 -1.0840599432863653 0.3332553727813726 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 98712 9970 SIRLATTPV True PC9_epitope_Rep1 956.5654805492001 956.56438993586 43.213 2 -1.084066298860125 0.3332553727813726 1.0 ['HOMER1-DMGDH|1|fusion', 'ENSG00000132837|ENST00000255189|DMGDH', 'DMGDH|p.I169Ffs*10|1|0.15|ENSG00000132837|chr5:79054219-79054219|T/-|frameshift_variant'] 3770 11354 AGTTYFLEV True PC9_epitope_Rep5 999.49131254943 999.49020993586 48.669 2 -1.0842028016459835 0.33329868780044175 1.0 ['ENST00000505328.1_1_4:108991620-108999477:-|nuORF'] 102549 18819 SQALGPSPPLF True H1975_Epitope_Rep2 1112.5866099165999 1112.58550993586 78.142 2 -1.0842660093084027 0.33329868780044175 1.0 ['nc|ENSG00000116990|P12524-2|MYCL'] 55294 17714 LARGAKQLV True PC9_epitope_Rep4 954.5974493838199 954.59634993586 76.162 2 -1.084267864758422 0.33329868780044175 1.0 ['ENST00000589137.5_1_19:36033816-36033978:-|nuORF'] 74946 6490 NLTQILEPS True NCI_RA007_Epitope_Rep1 1013.5393253710099 1013.53822993586 29.264 2 -1.0842698219859126 0.33329868780044175 1.0 ['nc|ENSG00000181827|Q2KHR2-1|RFX7', 'nc|ENSG00000181827|Q2KHR2-2|RFX7', 'ENSG00000181827|ENST00000559447|RFX7'] 55246 14004 LAQFREDITWR True NCI_RA007_Epitope_Rep2 1433.7415474182098 1433.7404499358602 59.131 2 -1.0842852911364045 0.33329868780044175 1.0 ['nc|ENSG00000142330|Q9HC96-4|CAPN10', 'nc|ENSG00000142330|Q9HC96-2|CAPN10', 'ENSG00000142330|ENST00000391984|CAPN10', 'nc|ENSG00000142330|Q9HC96-8|CAPN10', 'nc|ENSG00000142330|Q9HC96-6|CAPN10', 'nc|ENSG00000142330|Q9HC96-5|CAPN10', 'nc|ENSG00000142330|Q9HC96-3|CAPN10', 'nc|ENSG00000142330|Q9HC96-7|CAPN10'] 71534 16772 MKVWLLLG True NCI_RA007_Epitope_Rep5 958.5673951254998 958.56628993586 71.27 2 -1.0843457862413117 0.33329868780044175 1.0 ['ENSG00000104213|ENST00000251630|PDGFRL'] 46692 4936 ITWNPHWYRQP True NCI_RA007_Epitope_Rep5 1496.7313170876798 1496.72968490379 25.687 3 -1.0843499850220075 0.33329868780044175 1.0 ['nc|ENSG00000242265|Q86TG7|PEG10', 'ENSG00000242265|ENST00000612748|PEG10', 'nc|ENSG00000242265|Q86TG7-4|PEG10', 'ENST00000482108.1_2_7:94293788-94294991:+|nuORF'] 138714 14198 YRWLWWQPWWW True NCI_RA007_Epitope_Rep1 1791.8462872702696 1791.8451899358602 59.263 2 -1.0843602204601492 0.33329868780044175 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1', 'chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 14783 17314 DWQRQLRYYWD True NCI_RA007_Epitope_Rep2 1627.75317473107 1627.7520699358602 72.084 2 -1.084375097121681 0.33330734952124824 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 126900 17177 VPTVPVKN True PC9_epitope_Rep2 852.50690304392 852.50580993586 71.331 2 -1.0844068162784632 0.3333160110169932 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 126210 15311 VPGRWAWRCF True PC9_epitope_Rep4 1276.6287665954399 1276.62712490379 66.827 3 -1.0844459212611226 0.3333246722876853 1.0 ['ENST00000442820.5_1_1:163291810-163292704:+|nuORF', 'ENST00000524800.5_1_1:163291810-163295872:+|nuORF'] 13644 6402 DPVQRYVP True PC9_epitope_Rep3 972.5028802926398 972.50178993586 29.65 2 -1.0844802839190602 0.33332467262523385 1.0 ['nc|ENSG00000102893|Q93100-4|PHKB', 'nc|ENSG00000102893|Q93100-2|PHKB', 'nc|ENSG00000102893|Q93100-3|PHKB', 'ENSG00000102893|ENST00000323584|PHKB'] 134651 6226 WWIWWQWWKLQ True NCI_RA007_Epitope_Rep2 1744.86668836168 1744.86505490379 28.824 3 -1.084490617308019 0.33332467262523385 1.0 ['chr12:54282841-54283827|502|22.89|0.0|21.13|+|1|HNRNPA1,HNRNPA1|1'] 63713 21919 LPQPPRESP True PC9_epitope_Rep1 1019.53999407735 1019.53888993586 89.128 2 -1.0845078016453198 0.33332467262523385 1.0 ['ENSG00000149596|ENST00000372980|JPH2'] 134275 16864 WRRWCWRWPWR True PC9_epitope_Rep5 1772.8735221609597 1772.87242993586 69.877 2 -1.0845162300881952 0.3333290032605448 1.0 ['nc|ENSG00000127252|Q9HDD0-2|PLAAT1'] 37069 21145 GVSGQRCD True PC9_epitope_Rep5 820.3497507795199 820.3492049679301 86.394 1 -1.0845468869901809 0.3333290032605448 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 66411 19347 LSRIARDKWP True PC9_epitope_Rep1 1240.7040397106798 1240.70294993586 79.223 2 -1.0845749967906282 0.3333290032605448 1.0 ['nc|ENSG00000065457|Q9BUB4-2|ADAT1', 'ENSG00000065457|ENST00000564657|ADAT1', 'ENST00000564489.1_1_16:75579850-75642318:-|nuORF'] 135718 12345 YEIWMCILF True H1975_Epitope_Rep3 1216.56607479616 1216.56496993586 52.671 2 -1.0845891329267872 0.3333290032605448 1.0 ['GRIA3|p.V560L|1|0.21|ENSG00000125675|chrX:123417579-123417579|G/C|missense_variant'] 65377 4578 LSEQNPAAS True PC9_epitope_Rep2 915.4297749220299 915.42866993586 22.977 2 -1.0845924517810872 0.3333290032605448 1.0 ['ENSG00000157107|ENST00000430046|FCHO2', 'nc|ENSG00000157107|Q0JRZ9-3|FCHO2'] 98899 4014 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 21.685 2 -1.0846286504680258 0.333350653399496 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 85701 23158 QLRSKEVSV True PC9_epitope_Rep1 1044.5927579262 1044.5916699358602 93.872 2 -1.0846561624616071 0.33335498285357995 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 91333 27564 RMKKKKKLLPF True PC9_epitope_Rep5 1415.91628140639 1415.91463490379 113.26 3 -1.0846684980054238 0.33335498285357995 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 121067 10176 VGFTDYLP True PC9_epitope_Rep1 910.4436340810198 910.44252993586 44.018 2 -1.0847248563266778 0.33338529083209933 1.0 ['ENSG00000181785|ENST00000641320|OR5AS1'] 12593 12705 DLDSRVLYY True H1975_Epitope_Rep2 1142.5607890915799 1142.5596899358602 53.97 2 -1.0847288834142501 0.33338529083209933 1.0 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1'] 13333 9538 DMELWKEH True H1975_Epitope_Rep2 1086.4804305959 1086.47932993586 41.66 2 -1.0847693342231197 0.3334199280397989 1.0 ['ENST00000494263.5_1_2:219646839-219678911:+|nuORF', 'ENSG00000135929|ENST00000258415|CYP27A1'] 111917 7355 TLRTAPPPK True H1975_Epitope_Rep1 979.5814649665098 979.58036993586 33.3 2 -1.0849295114289672 0.33345456434769055 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S3673Afs*24|1|0.28|ENSG00000117983|chr11:1247893-1247893|C/-|frameshift_variant'] 7756 11184 ASVEKASFRAV True PC9_epitope_Rep5 1163.62987171091 1163.62822490379 48.008 3 -1.0850178828277957 0.3334935252172332 1.0 ['CUBN|p.R1579Gfs*21|2|0.21|ENSG00000107611|chr10:16954510-16954510|G/-|frameshift_variant', 'CUBN|p.E3207Rfs*14|1|0.2|ENSG00000107611|chr10:16851279-16851279|C/-|frameshift_variant', 'ENSG00000107611|ENST00000377833|CUBN'] 124012 17254 VKLGPALT True NCI_RA007_Epitope_Rep4 797.50108938749 797.49998993586 74.708 2 -1.085029898009118 0.3334935252172332 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2', 'ENSG00000111961|ENST00000367467|SASH1'] 81288 4795 PPQGGNLSQGP True PC9_epitope_Rep4 1050.50942222506 1050.50832993586 25.019 2 -1.085039926543637 0.3334935252172332 1.0 ['PRB3|p.Q109L|1|0.15|ENSG00000197870|chr12:11267923-11267923|T/A|missense_variant'] 18957 23461 ELFISGDELMN True NCI_RA007_Epitope_Rep5 1266.5802042068196 1266.57856490379 97.547 3 -1.085065784099991 0.3335021820448878 1.0 ['ENSG00000130338|ENST00000367097|TULP4'] 13653 7005 DPYHGNQEKVP True H1975_Epitope_Rep1 1282.59421447818 1282.5931099358602 31.979 2 -1.085128688077743 0.3335757796163288 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 31198 22722 GDIVMTQSPL True PC9_epitope_Rep5 1059.52704643515 1059.5259499358601 92.404 2 -1.0851865517386488 0.3336104004052106 1.0 ['nc|ENSG00000244116|A0A075B6P5|IGKV2-28'] 82385 21871 PTWDLPRRL True NCI_RA007_Epitope_Rep3 1152.64037682496 1152.63874490379 95.014 3 -1.0851883812094587 0.3336104004052106 1.0 ['ENST00000290079.8_1_9:139687350-139687656:+|nuORF'] 45524 13222 ISFGERRRLSE True NCI_RA007_Epitope_Rep1 1348.7211463267997 1348.72004993586 55.428 2 -1.085210668021961 0.3336104004052106 1.0 ['CMYA5|p.T3929S|1|0.18|ENSG00000164309|chr5:79791065-79791065|A/T|missense_variant'] 121444 20124 VGIISIPLK True PC9_epitope_Rep2 938.6164534929 938.61534993586 82.816 2 -1.0852450731267913 0.3336104004052106 1.0 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant', 'RYR3|p.V3486Lfs*23|1|0.16|ENSG00000198838|chr15:33813536-33813560|GTGGTGGCCTGTTTCAGGATGGCCC/-|frameshift_variant'] 131128 10696 VVPEMTEI True NCI_RA007_Epitope_Rep2 916.457569893 916.45646993586 46.205 2 -1.0853012538229874 0.3336277094507721 1.0 ['ENST00000559973.5_1_15:76508902-76510013:-|nuORF', 'ENST00000560179.1_1_15:76508902-76518306:-|nuORF', 'nc|ENSG00000140374|P13804-2|ETFA', 'ENSG00000140374|ENST00000557943|ETFA'] 20169 11917 ENQKLLQELK True H1975_Epitope_Rep1 1241.69795127073 1241.6968499358602 50.84 2 -1.0853125105350008 0.3336277094507721 1.0 ['ENSG00000165325|ENST00000298050|DEUP1'] 99486 16613 SLEPWDHHMRK True PC9_epitope_Rep5 1434.6826526431003 1434.6815499358602 68.908 2 -1.0853941944342365 0.3336363636363636 1.0 ['ENST00000565192.1_1_6:31027289-31027466:+|nuORF'] 43207 11828 IGTVTPALK True PC9_epitope_Rep3 898.5487678558999 898.54766993586 50.515 2 -1.0854639694147081 0.3336753113515058 1.0 ['nc|ENSG00000100227|Q9BY77-2|POLDIP3', 'ENSG00000100227|ENST00000252115|POLDIP3', 'ENST00000491021.1_1_22:42993722-42998991:-|nuORF'] 74497 9408 NKNQLKQL True PC9_epitope_Rep2 984.5716285587998 984.57052993586 41.528 2 -1.0855093953170956 0.3336753113515058 1.0 ['ENSG00000083535|ENST00000326291|PIBF1', 'nc|ENSG00000083535|Q8WXW3-4|PIBF1', 'ENST00000492803.1_1_13:73372062-73409389:+|nuORF'] 20550 9777 EQARPEQEYKR True H1975_Epitope_Rep1 1432.7058901854796 1432.7047899358602 42.536 2 -1.0855173822867037 0.3336753113515058 1.0 ['ENSG00000181786|ENST00000324436|ACTL9'] 101407 8054 SNFNYFYHRET True NCI_RA007_Epitope_Rep2 1476.6422272997597 1476.6411299358601 35.959 2 -1.0855384862066928 0.3336796311927797 1.0 ['ENSG00000177272|ENST00000369769|KCNA3', 'ENSG00000111262|ENST00000382545|KCNA1', 'ENSG00000182255|ENST00000328224|KCNA4', 'ENSG00000130037|ENST00000252321|KCNA5', 'nc|ENSG00000130037|P22460-2|KCNA5', 'ENSG00000143105|ENST00000369771|KCNA10', 'ENSG00000177301|ENST00000316361|KCNA2', 'nc|ENSG00000151079|P17658|KCNA6'] 58154 6840 LESFVKSQEGE True H1975_Epitope_Rep1 1251.5982967991101 1251.5971899358601 31.355 2 -1.0855791053504362 0.3336796311927797 1.0 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D', 'nc|ENSG00000168918|Q92835-3|INPP5D'] 65708 22645 LSHMPLWRRWM True PC9_epitope_Rep5 1511.76421452243 1511.76310993586 92.105 2 -1.0856727053770052 0.33372724203308834 1.0 ['ENST00000391992.3_1_12:9181361-9181625:-|nuORF'] 94532 6253 RYIFDNVAK True PC9_epitope_Rep5 1124.5978433066398 1124.5961849037901 29.03 3 -1.0857021189498315 0.33377485163686416 1.0 ['ENSG00000049449|ENST00000054950|RCN1', 'ENST00000398357.2_1_13:45965036-45965387:-|nuORF', 'nc|ENSG00000049449|Q15293-2|RCN1'] 16107 474 EEEDDCQTC True H1975_Epitope_Rep3 1070.31685553838 1070.3157499358601 2.622 2 -1.0857352242158949 0.3337791686685972 1.0 ['LSG1|p.W318C|1|0.27|ENSG00000041802|chr3:194652948-194652948|C/A|missense_variant'] 116726 22496 TYLDIFRDF True PC9_epitope_Rep2 1188.5815245361598 1188.5804299358601 92.02 2 -1.0857386542931613 0.3337791686685972 1.0 ['ENSG00000072818|ENST00000158762|ACAP1'] 133741 8390 WLLFWNVLFWK True PC9_epitope_Rep5 1550.8438276587801 1550.8421849037902 37.215 3 -1.0858890228953546 0.33381810626915287 1.0 ['nc|ENSG00000197858|O43292-2|GPAA1', 'ENSG00000197858|ENST00000355091|GPAA1', 'ENST00000530796.1_1_8:145140395-145141025:+|nuORF', 'ENST00000529638.1_1_8:145140125-145141025:+|nuORF'] 38295 18147 HFLFRFVLFK True NCI_RA007_Epitope_Rep5 1352.7757480989596 1352.77464993586 76.609 2 -1.0858979996449911 0.33381810626915287 1.0 ['ENST00000409371.7_1_4:6202075-6202225:-|nuORF'] 90967 15429 RLHRPQRRPQL True NCI_RA007_Epitope_Rep2 1455.86473129907 1455.8636299358602 64.716 2 -1.0859408357734173 0.33381810626915287 1.0 ['ENST00000478749.5_1_1:12079550-12082221:+|nuORF'] 59587 14910 LGRYPPWP True H1975_Epitope_Rep2 984.5181364339599 984.51702993586 62.504 2 -1.0859731770601593 0.33383540654945854 1.0 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'ENST00000587875.1_1_16:4882642-4897278:-|nuORF', 'GLYR1|p.R381Afs*15|1|0.29|ENSG00000140632|chr16:4812227-4812228|-/C|frameshift_variant'] 19591 2737 ELRGSDHTDV True H1975_Epitope_Rep2 1127.5207151847499 1127.51905490379 14.585 3 -1.0859961129804356 0.33383540654945854 1.0 ['nc|ENSG00000088899|O60299-2|LZTS3', 'ENSG00000088899|ENST00000337576|LZTS3'] 68157 11911 LTPRPAIAP True PC9_epitope_Rep2 934.5600012459398 934.55890993586 51.14 2 -1.086014971791505 0.33384405635265857 1.0 ['ENST00000590444.5_1_19:6475849-6475978:-|nuORF', 'ENST00000590818.5_1_19:6475623-6475978:-|nuORF'] 4048 830 AHMVTTDFQKI True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 4.5052 3 -1.0862041764849184 0.33391762750597276 1.0 ['PSMB3|p.Q33H|1|0.17|ENSG00000277791|chr17:38753245-38753245|G/C|missense_variant'] 34049 6007 GNQLIPQPL True H1975_Epitope_Rep3 978.5498304850598 978.54872993586 28.12 2 -1.0863042025273093 0.3339349243034096 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000519559.1_1_8:52732913-52752014:-|nuORF', 'nc|ENSG00000168300|Q96MG8-2|PCMTD1'] 110948 11654 TLCHLPLQLHR True NCI_RA007_Epitope_Rep1 1329.73395993997 1329.7328699358602 49.304 2 -1.0863412564410075 0.3339349243034096 1.0 ['ENST00000471308.5_1_3:51992122-51994256:-|nuORF'] 37009 4669 GVRTLTPNPTA True H1975_Epitope_Rep3 1125.61422164677 1125.6131299358601 23.083 2 -1.0863588982646584 0.33396084337349397 1.0 ['ENST00000557149.5_1_14:21492198-21492406:-|nuORF', 'ENST00000553503.5_1_14:21492198-21493040:-|nuORF', 'ENST00000557264.5_1_14:21492198-21492413:-|nuORF', 'ENST00000554415.5_1_14:21492198-21493677:-|nuORF', 'ENST00000397844.6_1_14:21492198-21493600:-|nuORF', 'ENST00000556147.5_1_14:21492198-21492312:-|nuORF', 'ENST00000555158.5_1_14:21492198-21493056:-|nuORF', 'ENST00000556924.5_1_14:21492198-21493426:-|nuORF'] 79076 19708 PFTLSRVP True PC9_epitope_Rep2 915.5178020807899 915.51670993586 81.194 2 -1.0863635990409488 0.33396084337349397 1.0 ['ENST00000530686.5_1_11:27679821-27680730:+|nuORF'] 45890 16709 ISRCKTGVW True PC9_epitope_Rep2 1048.54878493924 1048.54768993586 69.518 2 -1.086397432691749 0.33396084337349397 1.0 ['ENST00000436108.6_1_11:903065-904743:-|nuORF'] 112732 21166 TPIQSNLLDM True PC9_epitope_Rep4 1130.56416021986 1130.56357496793 89.578 1 -1.0864334598536582 0.33396084337349397 1.0 ['TTF2|p.N771S|1|0.13|ENSG00000116830|chr1:117088952-117088952|A/G|missense_variant'] 79013 22392 PFLVMIIK True PC9_epitope_Rep2 959.58779621691 959.58668993586 91.625 2 -1.0865011190737692 0.33396084337349397 1.0 ['ENST00000562622.5_1_16:58149118-58163019:-|nuORF', 'ENSG00000070761|ENST00000262498|CFAP20', 'ENST00000567092.1_1_16:58149929-58163019:-|nuORF'] 60443 14174 LILELLQHKK True NCI_RA007_Epitope_Rep4 1233.7808930490498 1233.77923490379 61.8 3 -1.0865158781001885 0.33396084337349397 1.0 ['ENSG00000119285|ENST00000366582|HEATR1'] 92052 24111 RPRRRPRRWLK True PC9_epitope_Rep3 1575.9810984639896 1575.9800099358602 98.025 2 -1.086543583436021 0.3339824732229795 1.0 ['ENST00000251102.12_1_16:57965650-57974178:-|nuORF'] 37139 7421 GVTESVLKP True PC9_epitope_Rep6 928.5229470308799 928.52184993586 37.768 2 -1.0867183813812973 0.3340690156570509 1.0 ['ENSG00000134962|ENST00000257408|KLB'] 66297 10615 LSQHRRTHM True PC9_epitope_Rep5 1164.5934437158799 1164.59179490379 45.818 3 -1.086754167573147 0.334125253154697 1.0 ['ENSG00000198342|ENST00000242804|ZNF442', 'nc|ENSG00000198342|Q9H7R0-2|ZNF442'] 23214 10107 EVQKDIKNV True PC9_epitope_Rep2 1071.59242357303 1071.5913299358601 44.214 2 -1.0867541893324604 0.334125253154697 1.0 ['ENST00000507097.5_1_5:137893182-137909502:-|nuORF', 'ENSG00000113013|ENST00000297185|HSPA9'] 78269 4685 PARPTLLEQV True PC9_epitope_Rep1 1122.6397081186199 1122.63805490379 22.893 3 -1.086785843007144 0.3341295289031973 1.0 ['ENSG00000133111|ENST00000255476|RFXAP'] 109073 19412 TFELSMRQSW True PC9_epitope_Rep5 1283.59685733047 1283.59576993586 79.716 2 -1.086787801892066 0.3341295289031973 1.0 ['ENST00000510488.1_1_3:141190122-141190284:-|nuORF'] 119893 10680 VEVYDRNSLY True H1975_Epitope_Rep2 1256.60371653272 1256.60260993586 46.104 2 -1.08684568964798 0.3341295289031973 1.0 ['ENSG00000134256|ENST00000682167|CD101'] 122752 10251 VGVFCAII True PC9_epitope_Rep2 820.4516966669198 820.45058993586 44.763 2 -1.08685786285172 0.3341295289031973 1.0 ['ABCB1|p.G1114Afs*33|1|0.14|ENSG00000085563|chr7:87509423-87509423|C/-|frameshift_variant', 'ENSG00000085563|ENST00000622132|ABCB1', 'nc|ENSG00000085563|P08183-2|ABCB1'] 31938 13118 GERYWRYSEER True H1975_Epitope_Rep3 1529.7011391582098 1529.70004993586 55.704 2 -1.0868709163387915 0.3341295289031973 1.0 ['ENSG00000125966|ENST00000246186|MMP24'] 72438 22072 MTLGMIWTI True PC9_epitope_Rep2 1064.53986004832 1064.53876993586 90.373 2 -1.0869284871411657 0.33416413531687306 1.0 ['ENSG00000130402|ENST00000252699|ACTN4', 'ENST00000588618.5_1_19:39138385-39212431:+|nuORF', 'nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2', 'ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF', 'ENST00000554508.5_1_14:69367621-69387744:-|nuORF', 'ACTN4-CATSPERG|1|fusion'] 42245 16044 IEHFSSPPN True PC9_epitope_Rep1 1026.47705946762 1026.4759699358601 66.528 2 -1.086935777958696 0.33417277860712663 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 128082 10626 VRRLVKILLLG True NCI_RA007_Epitope_Rep2 1278.8863611770998 1278.8847149037902 45.932 3 -1.0870546313838414 0.33422900684086865 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 71592 17724 MLIFILPA True NCI_RA007_Epitope_Rep5 916.54559705176 916.54448993586 74.957 2 -1.0870628614532976 0.33422900684086865 1.0 ['ENSG00000139209|ENST00000266579|SLC38A4'] 62974 10260 LNEISEETTIQ True PC9_epitope_Rep4 1275.61942616651 1275.6183299358602 47.148 2 -1.0870854275740536 0.3342506295594382 1.0 ['ENSG00000164118|ENST00000503780|CEP44'] 127161 13209 VQELAEQLYK True H1975_Epitope_Rep3 1219.64485306871 1219.6437499358601 56.062 2 -1.0871193505796926 0.3342549325025961 1.0 ['nc|ENSG00000100241|O95248|SBF1', 'ENSG00000100241|ENST00000380817|SBF1', 'nc|ENSG00000100241|O95248-4|SBF1'] 125309 12069 VLRTLRDTPM True PC9_epitope_Rep2 1200.66487732064 1200.66322490379 51.736 3 -1.0871339581802921 0.3342549325025961 1.0 ['ENSG00000163959|ENST00000296327|SLC51A'] 115942 21512 TVPQLEAPPAS True PC9_epitope_Rep4 1108.5764391557198 1108.57534993586 90.926 2 -1.0871362983846866 0.3342635739411482 1.0 ['ENST00000579008.1_1_18:8412788-8413139:+|nuORF'] 59971 8773 LHNGLLAR True NCI_RA007_Epitope_Rep3 892.52428444356 892.52318993586 41.597 2 -1.0871391193174862 0.3342678763807225 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 42827 24562 IFKRLKSFICP True NCI_RA007_Epitope_Rep5 1350.7845985304998 1350.7835099358601 101.95 2 -1.0871568018714255 0.3342678763807225 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 19621 8430 ELRQLRRRWFH True NCI_RA007_Epitope_Rep1 1595.89094604691 1595.88931490379 36.793 3 -1.0872670119830505 0.3342721785969239 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 107956 4509 TCCECCNN True H1975_Epitope_Rep3 888.2234302612001 888.22232993586 22.463 2 -1.0872712827087967 0.3342721785969239 1.0 ['ENSG00000205359|ENST00000506729|SLCO6A1', 'nc|ENSG00000205359|Q86UG4-3|SLCO6A1', 'nc|ENSG00000205359|Q86UG4-2|SLCO6A1'] 35084 22165 GRKTRRFK True PC9_epitope_Rep4 1047.6413798844699 1047.6402899358602 93.482 2 -1.0872784774780417 0.33428081925083714 1.0 ['ENSG00000113141|ENST00000417647|IK', 'ENST00000515592.1_1_5:140041093-140041799:+|nuORF'] 85629 18953 QLPLRVLIV True PC9_epitope_Rep6 1049.6961007959299 1049.69500993586 85.549 2 -1.0873561845131932 0.3343110407392506 1.0 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000470184.1_1_7:100179334-100179876:-|nuORF'] 65335 19288 LSELLSFPSPL True PC9_epitope_Rep1 1201.6594405036901 1201.65834993586 78.995 2 -1.0873645245069963 0.3343110407392506 1.0 ['ENST00000511638.5_1_5:137515050-137515239:+|nuORF'] 95494 5517 SAPAPSPWPWH True H1975_Epitope_Rep3 1231.57744221523 1231.5757949037902 26.269 3 -1.0873738072000005 0.3343110407392506 1.0 ['FOXN1|p.Y617Tfs*59|2|0.28|ENSG00000109101|chr17:28537337-28537337|C/-|frameshift_variant'] 20642 10427 EQGDAAPLLR True H1975_Epitope_Rep1 1068.55637241748 1068.55577496793 45.061 1 -1.0873768246453084 0.3343110407392506 1.0 ['ENSG00000257093|ENST00000536163|DENND11'] 131542 15360 VVVHSVTPSL True PC9_epitope_Rep4 1036.59169529704 1036.5905899358602 67.014 2 -1.0874372070034692 0.3343110407392506 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 59028 12477 LGARETFENYY True PC9_epitope_Rep5 1361.62518025329 1361.6240899358602 52.991 2 -1.087490142149024 0.3343326584644136 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 123585 1323 VIKFLIIIA True PC9_epitope_Rep4 1028.6997891940398 1028.69868993586 7.6428 2 -1.0875381047746329 0.33435427562846354 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 131893 14195 VYEEETVDL True PC9_epitope_Rep1 1095.49718577551 1095.49608993586 59.423 2 -1.087566931513451 0.3343758922314221 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant', 'ZDBF2|p.I1094Nfs*14|1|0.39|ENSG00000204186|chr2:206307801-206307802|-/A|frameshift_variant'] 5336 5748 ALSRGETP True NCI_RA007_Epitope_Rep2 829.4293809992099 829.42828993586 26.976 2 -1.087753421902126 0.33441912375415284 1.0 ['ENST00000510450.1_1_3:125688183-125696014:+|nuORF', 'ENSG00000114547|ENST00000514116|ROPN1B', 'ENSG00000065371|ENST00000405845|ROPN1'] 36524 12469 GVKLKYCRYY True PC9_epitope_Rep4 1291.67471372835 1291.6736099358602 55.769 2 -1.0877787658842977 0.33441912375415284 1.0 ['nc|ENSG00000152520|Q58A45-4|PAN3', 'ENST00000503791.5_1_13:28712794-28846220:+|nuORF', 'nc|ENSG00000152520|Q58A45-3|PAN3', 'ENSG00000152520|ENST00000380958|PAN3'] 123325 13585 VHTPPHVASAL True PC9_epitope_Rep4 1127.6087423435101 1127.60710490379 60.149 3 -1.0878596377376588 0.3344623530327805 1.0 ['ENSG00000037637|ENST00000375592|FBXO42'] 27377 19005 FMQRHQLLKR True NCI_RA007_Epitope_Rep3 1355.7608433941498 1355.75920490379 83.039 3 -1.0878597090503455 0.3344623530327805 1.0 ['ENSG00000065613|ENST00000369755|SLK', 'nc|ENSG00000065613|Q9H2G2-2|SLK', 'ENST00000474260.1_1_10:105768003-105778705:+|nuORF'] 33725 10434 GLRKIIVRVLL True PC9_epitope_Rep2 1278.8863611770998 1278.8847149037902 45.454 3 -1.0878686774255086 0.33446664936413184 1.0 ['ENST00000464167.5_1_3:197676878-197677004:+|nuORF'] 101233 18636 SLWDSRMLQKK True NCI_RA007_Epitope_Rep2 1390.7391048900597 1390.7380099358602 77.289 2 -1.087875559301426 0.33446664936413184 1.0 ['ENST00000291572.12_1_21:45403063-45403207:+|nuORF'] 111032 20288 TLDPDKPSL True PC9_epitope_Rep1 984.51277627 984.51166993586 82.864 2 -1.087924141140358 0.334479581640995 1.0 ['ENSG00000077585|ENST00000366592|GPR137B'] 57564 10217 LELDRWSL True PC9_epitope_Rep5 1030.54474510462 1030.54364993586 44.287 2 -1.0879301492284283 0.334479581640995 1.0 ['ENSG00000170852|ENST00000304056|KBTBD2'] 127872 23597 VRPAIPGGG True PC9_epitope_Rep6 822.4711862415398 822.47008993586 103.92 2 -1.0879727279419782 0.334479581640995 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 60545 17469 LIPQRSCSL True PC9_epitope_Rep5 1015.54845058607 1015.54734993586 72.196 2 -1.0880478093026125 0.3345530987231392 1.0 ['nc|ENSG00000105639|P52333-2|JAK3', 'ENSG00000105639|ENST00000458235|JAK3', 'ENST00000526008.5_1_19:17949989-17958765:-|nuORF', 'nc|ENSG00000105639|P52333-4|JAK3', 'ENST00000527031.5_1_19:17947866-17955268:-|nuORF', 'ENST00000528293.1_1_19:17953965-17958870:-|nuORF'] 110343 14280 TIKPKCTV True PC9_epitope_Rep5 888.5102741722 888.50916993586 59.931 2 -1.0880834921658722 0.33457470966067604 1.0 ['nc|ENSG00000179119|Q68D10-2|SPTY2D1', 'ENSG00000179119|ENST00000336349|SPTY2D1', 'ENST00000536336.5_1_11:18633859-18655855:-|nuORF'] 12892 8004 DLLSALVSMEK True NCI_RA007_Epitope_Rep1 1204.63732516012 1204.63622993586 35.128 2 -1.0882277791128918 0.33461358800020763 1.0 ['ENSG00000188782|ENST00000456354|CATSPER4'] 134994 18054 YAGKIQRKR True NCI_RA007_Epitope_Rep3 1118.6672602791398 1118.6661699358601 79.109 2 -1.0882574126697062 0.33461358800020763 1.0 ['ENST00000567451.1_1_16:19559765-19562567:+|nuORF', 'nc|ENSG00000103540|O43303|CCP110'] 117595 16821 VAGRELLTAV True PC9_epitope_Rep5 1027.6025943339098 1027.6014899358602 69.712 2 -1.088270467314173 0.33461358800020763 1.0 ['ENSG00000162391|ENST00000302250|FAM151A'] 48470 9344 KEERDDIPAQ True PC9_epitope_Rep6 1199.5782300608698 1199.57712993586 46.126 2 -1.088347429020032 0.3346222216455384 1.0 ['ENST00000229405.8_1_6:35260320-35261695:+|nuORF', 'nc|ENSG00000065029|P36508-2|ZNF76', 'ENSG00000065029|ENST00000373953|ZNF76'] 59036 10446 LGATEVKLL True NCI_RA007_Epitope_Rep1 942.5749826037398 942.57388993586 44.615 2 -1.0884674313769136 0.3346827559361619 1.0 ['ENSG00000001036|ENST00000002165|FUCA2'] 79577 17942 PGTPPPFG True PC9_epitope_Rep3 768.3806399016399 768.37954993586 74.215 2 -1.088478724960069 0.3346870458791779 1.0 ['MAP3K11|p.K833Wfs*112|1|0.19|ENSG00000173327|chr11:65598333-65598339|GTCTTTG/-|frameshift_variant'] 46324 10738 ITFIWEHLFYW True H1975_Epitope_Rep3 1553.7707222881697 1553.7696299358602 46.382 2 -1.0884792497982032 0.3346870458791779 1.0 ['nc|ENSG00000183454|Q12879-2|GRIN2A', 'ENSG00000183454|ENST00000330684|GRIN2A'] 85719 15510 QLSLHEDLSP True PC9_epitope_Rep4 1137.5666027480102 1137.56550993586 67.584 2 -1.088522256345185 0.3346956781233376 1.0 ['UNC13C|p.Q2008Pfs*15|1|0.1|ENSG00000137766|chr15:54567862-54567863|-/C|frameshift_variant', 'ENSG00000137766|ENST00000260323|UNC13C'] 100770 15053 SLRPYLCV True PC9_epitope_Rep5 949.50552314493 949.50442993586 62.907 2 -1.0885550451018076 0.33470431014349844 1.0 ['ENST00000505764.5_1_4:156680217-156693886:+|nuORF'] 64584 3495 LRDWMYKHRFK True NCI_RA007_Epitope_Rep1 1578.8241719266996 1578.82252490379 17.508 3 -1.0885959728313455 0.33471294193966916 1.0 ['ENSG00000153779|ENST00000283891|TGIF2LX', 'ENSG00000176679|ENST00000321217|TGIF2LY'] 82721 18654 PVPSLHPSTL True PC9_epitope_Rep6 1046.5760452329002 1046.57494993586 84.396 2 -1.0886585220867553 0.334730204860075 1.0 ['ENST00000493195.5_1_1:159898873-159900045:-|nuORF'] 78260 14821 PARLLATRPC True NCI_RA007_Epitope_Rep4 1096.6175332054 1096.6164299358602 64.471 2 -1.088679636860535 0.334730204860075 1.0 ['nc|ENSG00000214357|A8MQ27-3|NEURL1B', 'ENSG00000214357|ENST00000369800|NEURL1B'] 91327 27633 RMKKKKKLLPF True PC9_epitope_Rep1 1415.91628140639 1415.91463490379 113.24 3 -1.0887093543090365 0.334738781282028 1.0 ['ENST00000417638.1_1_9:12790708-12814310:-|nuORF'] 119138 23711 VEILERRT True PC9_epitope_Rep1 1014.5821932425 1014.58108993586 95.999 2 -1.0887150022176875 0.334738781282028 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 65178 10002 LSDVAYRDP True H1975_Epitope_Rep1 1034.50327421546 1034.5021699358601 43.409 2 -1.0887340831205046 0.334738781282028 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 35077 25758 GRKAGPPP True PC9_epitope_Rep1 778.4449714936999 778.44386993586 104.14 2 -1.0887404074073743 0.334738781282028 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 34467 17403 GQDGLQNDFL True PC9_epitope_Rep5 1105.50400249145 1105.50290993586 71.941 2 -1.0887685165995982 0.33476038504449807 1.0 ['PUS7|p.P334Hfs*2|1|0.35|ENSG00000091127|chr7:105482360-105482360|G/-|frameshift_variant', 'ENSG00000091127|ENST00000469408|PUS7', 'nc|ENSG00000091127|Q96PZ0-2|PUS7'] 15736 5594 EDDWSDWEEHP True NCI_RA007_Epitope_Rep2 1443.52150303039 1443.52040993586 26.374 2 -1.088780410561793 0.3347690152173631 1.0 ['ZNF277|p.I350Nfs*31|1|0.15|ENSG00000198839|chr7:112340909-112340910|-/A|frameshift_variant', 'ENSG00000198839|ENST00000361822|ZNF277'] 45813 10456 ISPGLRAPK True PC9_epitope_Rep2 937.5709002828099 937.56980993586 45.538 2 -1.0888886739037502 0.334773190125955 1.0 ['ENST00000334815.4_1_1:45792596-45792884:+|nuORF'] 5155 11036 ALPAMVPPALW True NCI_RA007_Epitope_Rep3 1164.6365373144797 1164.6349049037901 50.508 3 -1.088910783455548 0.334773190125955 1.0 ['ENST00000317683.3_1_19:46216640-46216787:-|nuORF'] 62554 8639 LLTLFFFPV True H1975_Epitope_Rep1 1095.63685458431 1095.63574993586 38.159 2 -1.0889124028219455 0.334773190125955 1.0 ['nc|ENSG00000100678|P57103-3|SLC8A3', 'SLC8A3|p.E535Nfs*35|2|0.17|ENSG00000100678|chr14:70166820-70166820|C/-|frameshift_variant'] 27506 19322 FPEVIINFP True PC9_epitope_Rep6 1074.57498260374 1074.57388993586 86.971 2 -1.0889262126129642 0.334773190125955 1.0 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000487169.5_1_2:242174673-242189369:-|nuORF'] 128182 21636 VRSVILQGSG True PC9_epitope_Rep6 1014.5821932424999 1014.58108993586 96.107 2 -1.0889537292417417 0.334773190125955 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 9505 13125 AWIFEKSL True PC9_epitope_Rep2 992.5331177917599 992.53202993586 55.759 2 -1.088998662074119 0.334773190125955 1.0 ['ENSG00000109685|ENST00000508803|NSD2', 'nc|ENSG00000109685|O96028-6|NSD2', 'ENST00000508355.5_1_4:1902372-1920392:+|nuORF', 'nc|ENSG00000109685|O96028-5|NSD2', 'nc|ENSG00000109685|O96028-3|NSD2'] 64880 7263 LSARFPAP True PC9_epitope_Rep2 857.4759372688098 857.47484993586 33.325 2 -1.0890053592216824 0.334773190125955 1.0 ['ENST00000377113.5_1_10:21785785-21785953:-|nuORF'] 70427 8957 LYRHWIEI True PC9_epitope_Rep6 1128.60801406752 1128.60637490379 44.448 3 -1.0890528677634905 0.334773190125955 1.0 ['nc|ENSG00000115607|O95256-2|IL18RAP', 'ENSG00000115607|ENST00000687160|IL18RAP'] 128183 21655 VRSVILQGSG True PC9_epitope_Rep6 1014.5821932424999 1014.58108993586 96.18 2 -1.089090051300843 0.33478181912520105 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 103127 6807 SQLSYYYMGFY True NCI_RA007_Epitope_Rep4 1420.6009396514 1420.5998499358602 32.808 2 -1.0891102527784289 0.334786105274081 1.0 ['ENSG00000107669|ENST00000224652|ATE1', 'nc|ENSG00000107669|O95260-2|ATE1'] 127867 24909 VRPAIPGGG True NCI_RA007_Epitope_Rep5 822.4711862415398 822.47008993586 103.31 2 -1.0891165552021722 0.334786105274081 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 44749 17117 IPRVFTSSI True PC9_epitope_Rep4 1018.58113061334 1018.58002993586 73.843 2 -1.0891791053810198 0.3347903345049871 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant'] 135090 18490 YALQRLRR True NCI_RA007_Epitope_Rep4 1074.6410455312998 1074.6399499358602 80.029 2 -1.0892188032447716 0.3347903345049871 1.0 ['ENST00000196371.9_1_5:41731180-41731306:-|nuORF'] 48682 3025 KELSSFTVGT True NCI_RA007_Epitope_Rep2 1067.54989005471 1067.5487899358602 16.337 2 -1.0892340415622839 0.3347903345049871 1.0 ['BRCA1|p.L1800V|1|0.31|ENSG00000012048|chr17:43049129-43049129|G/C|missense_variant'] 45346 10600 ISDEHRIDP True H1975_Epitope_Rep2 1080.5199869087598 1080.5188899358602 45.795 2 -1.0892391292216324 0.3347903345049871 1.0 ['TUBB6|p.G29R|1|0.6|ENSG00000176014|chr18:12308714-12308714|G/C|missense_variant'] 2966 18303 AFIIFLTTYGY True NCI_RA007_Epitope_Rep1 1307.68017594827 1307.67906993586 75.333 2 -1.0892734744160781 0.3347903345049871 1.0 ['chr1:103745515-103750424|173|21.9|0.0|21.06|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|4', 'chr1:103745227-103750424|306|24.34|0.0|21.21|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|4', 'chr1:103651377-103750424|112|20.44|0.0|20.96|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|4', 'chr1:103651250-103750424|129|11.88|0.0|20.18|+|0|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|4', 'chr1:103651089-103750424|267|25.88|0.0|21.3|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|4'] 60301 7307 LIETYFVSP True PC9_epitope_Rep1 1067.55391280599 1067.55280993586 32.919 2 -1.089296970873148 0.3348119325551232 1.0 ['nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant'] 131658 17950 VWGSINTG True NCI_RA007_Epitope_Rep5 832.4079172786401 832.40682993586 75.83 2 -1.0893773269914986 0.334846500045395 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 98897 3607 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 19.981 2 -1.089393633178014 0.33485512697465697 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 127866 24041 VRPAIPGGG True NCI_RA007_Epitope_Rep3 822.4711862415398 822.47008993586 104.12 2 -1.0894183903207932 0.3348853496576053 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 41811 6461 IDSDPALQK True H1975_Epitope_Rep3 985.50802524273 985.50692993586 29.824 2 -1.089421590515272 0.3348853496576053 1.0 ['ENSG00000198765|ENST00000369522|SYCP1'] 64347 14718 LQNRRLFQSLH True PC9_epitope_Rep4 1410.7844152896998 1410.7833099358602 64.548 2 -1.0894352648451597 0.3348896324540243 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 42090 15013 IEEKDQEIKHL True H1975_Epitope_Rep3 1380.7248942945598 1380.7237899358602 63.139 2 -1.0894384284821674 0.3348896324540243 1.0 ['ENSG00000197442|ENST00000359015|MAP3K5', 'nc|ENSG00000197442|Q99683-2|MAP3K5'] 111147 9952 TLERWHTITHA True NCI_RA007_Epitope_Rep2 1363.6996826062302 1363.6985899358601 43.338 2 -1.0894997583479153 0.3349025405594678 1.0 ['FSHR|p.M492Ifs*32|1|0.35|ENSG00000170820|chr2:48963345-48963346|-/A|frameshift_variant', 'nc|ENSG00000170820|P23945-2|FSHR', 'nc|ENSG00000170820|P23945-3|FSHR', 'ENSG00000170820|ENST00000406846|FSHR', 'nc|ENSG00000170820|P23945-4|FSHR'] 122025 6519 VGQLLELAA True PC9_epitope_Rep4 912.5280324113198 912.52692993586 32.199 2 -1.0895048963279041 0.3349025405594678 1.0 ['nc|ENSG00000168763|Q8NE01-2|CNNM3', 'nc|ENSG00000168763|Q8NE01-3|CNNM3', 'ENSG00000168763|ENST00000305510|CNNM3'] 96423 18852 SEIEILAVDLP True PC9_epitope_Rep1 1197.6492697428098 1197.64816993586 77.298 2 -1.0895186606107525 0.3349025405594678 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 104561 14392 SSSGGGGS True NCI_RA007_Epitope_Rep5 594.2245331830601 594.22398496793 62.041 1 -1.0895856072432695 0.3349154476605457 1.0 ['ENSG00000167470|ENST00000682408|MIDN', 'nc|ENSG00000167470|Q504T8|MIDN', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'ENSG00000140948|ENST00000671377|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9|ZCCHC14', 'nc|ENSG00000140948|Q8WYQ9-2|ZCCHC14', 'ENSG00000174282|ENST00000380599|ZBTB4'] 118279 10570 VDAERLKHLI True NCI_RA007_Epitope_Rep1 1192.6928063206399 1192.6917099358602 45.098 2 -1.0895878458336703 0.3349154476605457 1.0 ['ENSG00000125730|ENST00000245907|C3'] 56005 21045 LDIWYSLF True NCI_RA007_Epitope_Rep5 1055.53278343859 1055.5316899358602 87.958 2 -1.0895905368169851 0.3349154476605457 1.0 ['ENST00000436950.5_1_2:64455600-64456705:+|nuORF'] 72647 10580 MWLCRKLL True NCI_RA007_Epitope_Rep3 1061.58781330025 1061.5867099358602 48.668 2 -1.0896962976453024 0.334937040447136 1.0 ['UGT3A1|p.G504R|1|0.25|ENSG00000145626|chr5:35954264-35954264|C/T|missense_variant'] 128184 21742 VRSVILQGSG True PC9_epitope_Rep6 1014.5821932424999 1014.58108993586 96.523 2 -1.0897305782360738 0.3349456648598179 1.0 ['nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 62374 7729 LLRQEQRRKE True NCI_RA007_Epitope_Rep2 1354.7793299092598 1354.77822993586 34.69 2 -1.0898014607137991 0.334980224340271 1.0 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3'] 113500 12995 TQSQYQAL True PC9_epitope_Rep5 937.4505103666098 937.44940993586 54.994 2 -1.0898272346726752 0.334988847969293 1.0 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A'] 19977 6514 EMECHEYMRRR True H1975_Epitope_Rep1 1538.6540720200999 1538.65243490379 30.116 3 -1.089843238898305 0.3350017505413711 1.0 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000270720.11_1_1:1887019-1905630:-|nuORF', 'nc|ENSG00000142609|Q9C0B2-2|CFAP74', 'nc|ENSG00000142609|Q9C0B2|CFAP74'] 122072 5364 VGRAPKQA True PC9_epitope_Rep4 825.48208527841 825.48098993586 27.353 2 -1.0898472161265766 0.3350017505413711 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 44183 21709 ILRFISDFLAF True PC9_epitope_Rep2 1340.7492585675998 1340.74816993586 88.98 2 -1.0898507375984043 0.3350017505413711 1.0 ['ENSG00000058063|ENST00000323116|ATP11B', 'ATP11B|p.P529Rfs*15|1|0.19|ENSG00000058063|chr3:182866403-182866422|TCTTCACCAGATGAAAAGGC/-|frameshift_variant'] 56742 10316 LEALTKHFQD True PC9_epitope_Rep3 1200.6138872935999 1200.61278993586 44.626 2 -1.09001224113445 0.3350363070539419 1.0 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 6963 9342 AQMTYYAQCY True NCI_RA007_Epitope_Rep5 1240.4892810274398 1240.48762490379 42.575 3 -1.0901174137353866 0.33505348460291734 1.0 ['nc|ENSG00000097033|Q9Y371-3|SH3GLB1', 'ENSG00000097033|ENST00000370558|SH3GLB1', 'nc|ENSG00000097033|Q9Y371-2|SH3GLB1'] 58558 16657 LFDSSLFFFF True PC9_epitope_Rep3 1268.61176203528 1268.61010490379 69.207 3 -1.0901231396304183 0.33505348460291734 1.0 ['chr5:90929313-90965415|333|22.99|0.23|6.64|+|1|TE_info:L1PA2,L1PA2_dup1646,L1,LINE,donor,-,90923631,90929313|None,ADGRV1|54'] 22542 14818 ETLLVQYQ True PC9_epitope_Rep3 992.51786165044 992.51676993586 62.134 2 -1.0901419898736033 0.33505348460291734 1.0 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS', 'ECPAS|p.P72S|1|0.43|ENSG00000136813|chr9:111444434-111444434|G/A|missense_variant'] 63593 21609 LPLLRVPLL True PC9_epitope_Rep4 1032.70593720364 1032.70484993586 91.309 2 -1.0901561705300318 0.33505348460291734 1.0 ['ENST00000296597.9_1_5:60240975-60241137:+|nuORF'] 122363 15408 VGSDVALREL True PC9_epitope_Rep5 1057.57677350889 1057.57566993586 64.276 2 -1.090170092216666 0.33505348460291734 1.0 ['nc|ENSG00000151062|Q7Z3S7-2|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-4|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-6|CACNA2D4', 'ENSG00000151062|ENST00000382722|CACNA2D4', 'nc|ENSG00000151062|Q7Z3S7-5|CACNA2D4'] 123584 1213 VIKFLIIIA True PC9_epitope_Rep4 1028.6997891940398 1028.69868993586 7.0334 2 -1.0901817480768632 0.33506210616393955 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 123453 6159 VIERPYECK True NCI_RA007_Epitope_Rep3 1135.5695799534699 1135.56793490379 31.227 3 -1.0902573687529926 0.33508790126017735 1.0 ['ENSG00000189144|ENST00000536220|ZNF573', 'nc|ENSG00000189144|Q86YE8-2|ZNF573', 'nc|ENSG00000189144|Q86YE8-4|ZNF573', 'nc|ENSG00000189144|Q86YE8-3|ZNF573'] 52213 8900 KMNKLGTKIVS True NCI_RA007_Epitope_Rep5 1217.71657854033 1217.71492490379 40.896 3 -1.0902585223657546 0.33508790126017735 1.0 ['ENSG00000168497|ENST00000304141|CAVIN2'] 63036 10050 LNIYNFTYK True NCI_RA007_Epitope_Rep4 1174.60225998074 1174.60060490379 45.503 3 -1.0902792383947648 0.33508790126017735 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 360 16023 AALAALALA True NCI_RA007_Epitope_Rep2 783.48543932335 783.48434993586 67.044 2 -1.0902823041027592 0.33508790126017735 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 35064 7134 GRGGVERAP True PC9_epitope_Rep3 897.4780625271299 897.47696993586 32.448 2 -1.0902850496857706 0.33508790126017735 1.0 ['ENST00000533093.5_1_8:144922116-144922908:-|nuORF'] 98896 3525 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 19.647 2 -1.0903276145307936 0.33508790126017735 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 26647 10887 FLAFEAQLSV True PC9_epitope_Rep5 1123.5913609438699 1123.58971490379 46.864 3 -1.0904046037148276 0.3351181061529287 1.0 ['ENST00000506793.5_1_4:44680541-44700695:+|nuORF', 'GUF1|p.K645Sfs*2|1|0.17|ENSG00000151806|chr4:44698598-44698598|A/-|frameshift_variant', 'ENSG00000151806|ENST00000281543|GUF1'] 110564 5861 TISAAETPR True H1975_Epitope_Rep1 944.4927095317599 944.49160993586 27.614 2 -1.0904449364619373 0.3351181061529287 1.0 ['ENST00000428482.5_2_2:242206301-242208418:-|nuORF'] 122426 4902 VGSKGPQGPP True H1975_Epitope_Rep3 922.4872302284998 922.48612993586 23.984 2 -1.0905513907071513 0.3351352052059838 1.0 ['ENSG00000206384|ENST00000358511|COL6A6'] 131233 20246 VVPRGGLR True H1975_Epitope_Rep2 852.5293698239999 852.52826993586 83.899 2 -1.0905664138064148 0.3351352052059838 1.0 ['ENST00000610187.1_1_9:137000377-137000500:-|nuORF'] 12856 12147 DLLEPFIAVS True NCI_RA007_Epitope_Rep1 1102.5910265906998 1102.58992993586 51.223 2 -1.0906600959162924 0.3351352052059838 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 45897 3232 ISREQMILWD True NCI_RA007_Epitope_Rep1 1289.6438075228898 1289.64217490379 16.466 3 -1.0906755939628388 0.3351352052059838 1.0 ['nc|ENSG00000152270|Q13370-2|PDE3B', 'ENSG00000152270|ENST00000282096|PDE3B', 'ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 125084 24153 VLPGKKKKKT True NCI_RA007_Epitope_Rep4 1125.75976368165 1125.75811490379 104.72 3 -1.0906824835926312 0.3351352052059838 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 49083 8650 KFVSKKMKK True NCI_RA007_Epitope_Rep5 1122.6947208969398 1122.6930749037901 39.941 3 -1.0907100939516334 0.3351352052059838 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN', 'nc|ENSG00000160145|O60229|KALRN'] 82688 8655 PVPAAAPDA True PC9_epitope_Rep5 807.41266830591 807.41156993586 38.235 2 -1.0907201663000352 0.3351352052059838 1.0 ['TAF5|p.G565Dfs*3|1|0.23|ENSG00000148835|chr10:103385355-103385356|GA/-|frameshift_variant', 'nc|ENSG00000148835|Q15542-2|TAF5', 'ENSG00000148835|ENST00000369839|TAF5', 'TAF5|p.K449Tfs*31|1|0.33|ENSG00000148835|chr10:103379951-103379952|AA/-|frameshift_variant'] 15154 2744 EAEQLSHQAAP True H1975_Epitope_Rep3 1179.5520153130299 1179.55090993586 14.639 2 -1.0907233744959632 0.3351352052059838 1.0 ['ENSG00000160957|ENST00000617875|RECQL4'] 81631 20129 PRRRFLTLRSV True NCI_RA007_Epitope_Rep5 1399.85243527987 1399.8507749037901 84.374 3 -1.0908354030989729 0.3351697496856487 1.0 ['ENST00000520674.5_1_5:141016607-141016847:+|nuORF'] 61472 16792 LLFHYLYFWHH True PC9_epitope_Rep5 1574.78229003138 1574.78118993586 69.598 2 -1.0909122081809015 0.3351826407072305 1.0 ['L1MB7_dup7884|chr6:109271511-109272669:-|1.663382698896682|0.075209377654616|4.47|479.0|67|2|anti-sense'] 44638 17667 IPIWLYWRIWH True PC9_epitope_Rep6 1581.86087470525 1581.85921490379 80.595 3 -1.0909139953111533 0.3351826407072305 1.0 ['ENST00000467733.1_1_3:156262080-156272878:-|nuORF', 'ENSG00000114850|ENST00000265044|SSR3', 'nc|ENSG00000114850|Q9UNL2-2|SSR3'] 45590 15659 ISGNPVTLT True PC9_epitope_Rep1 900.4916469026001 900.49109496793 65.052 1 -1.0909209764687102 0.3351826407072305 1.0 ['nc|ENSG00000143297|Q96RD9-4|FCRL5', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'FCRL5|p.Q200K|1|0.5|ENSG00000143297|chr1:157544508-157544508|G/T|missense_variant', 'ENST00000481082.1_1_1:157512505-157514867:-|nuORF'] 58167 7222 LESILMPKLEH True NCI_RA007_Epitope_Rep1 1308.71115880672 1308.71006993586 32.081 2 -1.0909788324348346 0.3352387618603204 1.0 ['ENSG00000155754|ENST00000439140|C2CD6', 'nc|ENSG00000155754|Q53TS8-2|C2CD6', 'nc|ENSG00000155754|Q53TS8-1|C2CD6', 'nc|ENSG00000155754|Q53TS8-3|C2CD6'] 41817 7699 IDSHILLQQP True H1975_Epitope_Rep1 1162.63462273818 1162.63352993586 34.576 2 -1.0909943502409938 0.3352387618603204 1.0 ['DNAH11|p.M2778I|1|0.79|ENSG00000105877|chr7:21744887-21744887|G/A|missense_variant'] 81209 23589 PPLMLIIF True PC9_epitope_Rep1 942.5612471159 942.56014993586 95.523 2 -1.091017216606762 0.3352473784494938 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 28553 8665 FSLHFFGG True H1975_Epitope_Rep3 910.43373810366 910.43264993586 38.328 2 -1.0910461769100679 0.3352559948152949 1.0 ['ENSG00000176567|ENST00000320048|OR4X1', 'OR4X1|p.A123Pfs*12|1|0.19|ENSG00000176567|chr11:48264226-48264226|G/-|frameshift_variant'] 116289 21480 TVVMMTRLE True PC9_epitope_Rep3 1078.5514873611799 1078.55038993586 87.914 2 -1.0911146805069671 0.33529053414732146 1.0 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 67005 14840 LTAIGHSS True NCI_RA007_Epitope_Rep5 784.4079172786401 784.40682993586 63.752 2 -1.0912311227674791 0.3353380340107839 1.0 ['ENST00000579295.1_1_1:213037039-213043480:+|nuORF'] 92847 25459 RRLPALAA True PC9_epitope_Rep5 866.5450198881398 866.54392993586 103.17 2 -1.091309595611967 0.33534230240817064 1.0 ['ENST00000294409.2_1_1:28995295-29010143:+|nuORF'] 62740 10719 LLYNVSGS True PC9_epitope_Rep6 851.43888305375 851.43778993586 52.043 2 -1.0913124167844095 0.33534230240817064 1.0 ['nc|ENSG00000076706|P43121-2|MCAM'] 121882 9352 VGPEPGPPG True PC9_epitope_Rep4 805.3970182417698 805.39592993586 43.579 2 -1.0913561966232599 0.33536387790810707 1.0 ['nc|ENSG00000099889|O00192-2|ARVCF', 'ENSG00000099889|ENST00000263207|ARVCF', 'ENST00000487793.5_1_22:19968732-19974706:-|nuORF', 'ENST00000473551.5_1_22:19968732-19978281:-|nuORF'] 131465 25678 VVTVGVITVL True PC9_epitope_Rep1 998.6375828603 998.63703496793 103.81 1 -1.0914814901150212 0.335407027230193 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 83509 15556 QDIVFHKKI True NCI_RA007_Epitope_Rep1 1126.6498788795 1126.6487899358601 64.595 2 -1.091511798048317 0.335407027230193 1.0 ['DRD5|p.E405K|1|0.42|ENSG00000169676|chr4:9783242-9783242|G/A|missense_variant'] 117204 8994 TYTFSLEGSG True PC9_epitope_Rep2 1060.47130538084 1060.47020993586 39.947 2 -1.0915342021129193 0.33541564063350526 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 58412 13398 LEVRVQAP True PC9_epitope_Rep2 910.5236157372198 910.52250993586 56.817 2 -1.0915965465463073 0.33542425381355384 1.0 ['FCRL6|p.V204L|1|0.49|ENSG00000181036|chr1:159809407-159809407|G/T|missense_variant', 'nc|ENSG00000181036|Q6DN72-3|FCRL6', 'nc|ENSG00000181036|Q6DN72-2|FCRL6', 'ENSG00000181036|ENST00000368106|FCRL6'] 126572 18864 VPPMADVVTI True PC9_epitope_Rep2 1040.55761828744 1040.55652993586 77.926 2 -1.0917074653571617 0.3354717470191809 1.0 ['ENST00000599662.1_1_19:42312894-42313461:+|nuORF'] 92613 8684 RRELWFWWRGW True NCI_RA007_Epitope_Rep1 1676.8476842525997 1676.84602490379 37.78 3 -1.091733530059974 0.335488887448973 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 79854 17806 PIHRRAKQ True H1975_Epitope_Rep2 1004.59918071932 1004.59808993586 73.81 2 -1.091733588680686 0.335488887448973 1.0 ['KANK4|p.Q729Rfs*30|1|0.31|ENSG00000132854|chr1:62268333-62268333|G/-|frameshift_variant', 'ENSG00000132854|ENST00000371153|KANK4'] 71749 10468 MMLSWLLQNEP True NCI_RA007_Epitope_Rep2 1360.65192967844 1360.6508299358602 45.311 2 -1.0917504823686506 0.335488887448973 1.0 ['ENST00000288502.8_2_9:117373626-117379440:+|nuORF'] 129713 17280 VTKARLTDK True NCI_RA007_Epitope_Rep3 1030.61349337078 1030.6123899358602 75.858 2 -1.0917643120179712 0.335488887448973 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 131469 24579 VVTVGVITVL True PC9_epitope_Rep4 998.6375828603 998.63703496793 103.03 1 -1.0917770840228702 0.335488887448973 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 17808 10971 EHYRGTFSLW True PC9_epitope_Rep4 1294.6094706195 1294.60836993586 49.972 2 -1.0917901630736715 0.33549315121748935 1.0 ['nc|ENSG00000274211|O14512-2|SOCS7', 'nc|ENSG00000274211|O14512|SOCS7', 'ENSG00000274211|ENST00000612932|SOCS7'] 23276 11537 EVRRHLQHFYW True H1975_Epitope_Rep3 1569.7953143265702 1569.7942099358602 49.502 2 -1.091790577963331 0.33549315121748935 1.0 ['ENST00000509144.2_1_8:106809432-107072670:-|nuORF', 'ENST00000520594.5_1_8:106799777-107072670:-|nuORF', 'ENST00000520078.5_1_8:106810397-107072670:-|nuORF'] 82597 25083 PVKAAAAAAAA True NCI_RA007_Epitope_Rep5 910.5236157372198 910.52250993586 103.98 2 -1.0918038856782941 0.33550176238855484 1.0 ['ENST00000590548.5_1_19:11597897-11616622:-|nuORF', 'ENSG00000161914|ENST00000293771|ZNF653'] 58682 23315 LFIFHIKVF True PC9_epitope_Rep1 1162.6902871394998 1162.6891899358602 94.471 2 -1.091887530945677 0.3355188141391106 1.0 ['ENST00000470773.1_1_2:172182447-172182657:-|nuORF'] 63130 11179 LNQAMQQEV True PC9_epitope_Rep4 1059.50189431647 1059.5007899358602 50.779 2 -1.0919200873367134 0.3355188141391106 1.0 ['ENST00000326019.10_1_2:27886341-27886545:+|nuORF'] 130256 7274 VTSSRQELNP True H1975_Epitope_Rep2 1129.57275075761 1129.57111490379 32.915 3 -1.0919477458864546 0.3355188141391106 1.0 ['ENSG00000135413|ENST00000257867|LACRT'] 131467 25489 VVTVGVITVL True PC9_epitope_Rep2 998.6375828603 998.63703496793 103.72 1 -1.091960198850857 0.3355188141391106 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 26483 4799 FIQQCQFFFYN True NCI_RA007_Epitope_Rep2 1483.65945758703 1483.65781490379 23.297 3 -1.0919677425783336 0.3355188141391106 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'nc|ENSG00000100852|Q13017-3|ARHGAP5', 'nc|ENSG00000100852|Q13017-4|ARHGAP5', 'ENST00000407916.2_1_7:55005616-55005874:+|nuORF'] 85243 24235 QKKQLLDRDFV True PC9_epitope_Rep3 1388.7775985737599 1388.77650993586 98.521 2 -1.091970647871436 0.3355188141391106 1.0 ['ENSG00000072786|ENST00000176763|STK10'] 80351 9385 PLGGPSPDP True H1975_Epitope_Rep2 835.40758292547 835.40703496793 41.062 1 -1.092010512360101 0.3355188141391106 1.0 ['nc|ENSG00000102858|O60291-3|MGRN1', 'ENSG00000102858|ENST00000262370|MGRN1', 'ENST00000415496.5_1_16:4738687-4738906:+|nuORF'] 73952 1327 NHLYRVTDLGC True NCI_RA007_Epitope_Rep2 1289.61865540421 1289.61700490379 7.2184 3 -1.0920126659001959 0.3355188141391106 1.0 ['ENST00000401950.6_1_22:30421882-30421939:+|nuORF'] 122233 13837 VGRPKNAP True PC9_epitope_Rep1 837.4820852784098 837.48098993586 58.066 2 -1.092079648775153 0.33554038120165336 1.0 ['ENSG00000180543|ENST00000322128|TSPYL5'] 65615 13901 LSGLPDTVFEI True PC9_epitope_Rep5 1189.6230549949698 1189.6219499358601 58.491 2 -1.092117611548993 0.3355489906450025 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 32251 24627 GFLMLLYVIL True PC9_epitope_Rep4 1180.69298956144 1180.6918899358602 103.22 2 -1.092168886671945 0.33557907829444306 1.0 ['ENST00000555826.5_1_14:45369638-45373733:+|nuORF', 'ENSG00000179476|ENST00000325192|C14orf28'] 99516 18341 SLESRLHFR True PC9_epitope_Rep1 1143.61489035311 1143.61378993586 75.336 2 -1.092178067064859 0.33557907829444306 1.0 ['nc|ENSG00000155158|Q5VTQ0-5|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-2|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-6|TTC39B', 'ENSG00000155158|ENST00000512701|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-3|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-4|TTC39B', 'nc|ENSG00000155158|Q5VTQ0|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-7|TTC39B', 'ENST00000380853.1_1_9:15172019-15185442:-|nuORF'] 7017 12798 AQRGKARP True PC9_epitope_Rep6 882.5147823890198 882.51368993586 60.727 2 -1.0921994802314885 0.33557907829444306 1.0 ['nc|ENSG00000127483|Q5SSJ5-3|HP1BP3', 'nc|ENSG00000127483|Q5SSJ5-2|HP1BP3', 'ENSG00000127483|ENST00000438032|HP1BP3'] 85717 18702 QLSKVLLNLK True PC9_epitope_Rep5 1154.7386938839 1154.7375899358601 76.955 2 -1.0922067719807327 0.33557907829444306 1.0 ['TDRD6|p.I1712Vfs*5|1|0.1|ENSG00000180113|chr6:46693262-46693290|ATTGACTCAGAGATAAAGCAGACTCTTGG/-|frameshift_variant', 'nc|ENSG00000180113|O60522-2|TDRD6', 'ENSG00000180113|ENST00000316081|TDRD6'] 17136 5048 EGTYTSHWRLS True NCI_RA007_Epitope_Rep2 1335.62076357919 1335.6196699358602 24.259 2 -1.0922081368359415 0.33557907829444306 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 66081 16699 LSNLREHQLRL True H1975_Epitope_Rep1 1377.78408093653 1377.78298993586 69.629 2 -1.0922332443479987 0.33560064262023215 1.0 ['ENSG00000109756|ENST00000691494|RAPGEF2', 'RAPGEF2|p.H487Tfs*21|1|0.18|ENSG00000109756|chr4:159332499-159332499|C/-|frameshift_variant', 'nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 20913 6005 EQTLEACLDVH True NCI_RA007_Epitope_Rep5 1256.5707021522799 1256.5696099358602 29.782 2 -1.0923524098063129 0.33564811815767315 1.0 ['nc|ENSG00000135828|Q05823-2|RNASEL', 'ENSG00000135828|ENST00000367559|RNASEL'] 134039 8351 WQGGGGDA True NCI_RA007_Epitope_Rep5 746.2983668296599 746.2978149679301 38.794 1 -1.09236631809853 0.33565237669555753 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-2|TRAPPC11'] 109038 22038 TEYIILVQR True PC9_epitope_Rep3 1133.6444591458899 1133.6433699358602 90.067 2 -1.0924262552102444 0.33565237669555753 1.0 ['PXK|p.R39L|2|0.21|ENSG00000168297|chr3:58365887-58365887|G/T|missense_variant'] 105727 21778 SVHKRIHNRWI True NCI_RA007_Epitope_Rep2 1444.81638412432 1444.8152899358602 90.263 2 -1.0925375293218391 0.33571280509923823 1.0 ['ENSG00000167785|ENST00000601372|ZNF558', 'ENST00000597304.5_1_19:8921959-8932201:-|nuORF', 'nc|ENSG00000167785|Q96NG5-2|ZNF558'] 80399 25375 PLIFLFLCK True PC9_epitope_Rep2 1092.64056006576 1092.63997496793 103.28 1 -1.0926297212888827 0.3357386223782565 1.0 ['nc|ENSG00000196335|Q9BXU1-3|STK31', 'nc|ENSG00000196335|Q9BXU1-2|STK31', 'ENSG00000196335|ENST00000355870|STK31'] 125085 25306 VLPGKKKKKT True NCI_RA007_Epitope_Rep5 1125.75976368165 1125.75811490379 104.87 3 -1.0926300117638266 0.3357386223782565 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 81977 12190 PSRRPGRSL True NCI_RA007_Epitope_Rep4 1024.5890099584399 1024.5879099358601 53.883 2 -1.0926439809106774 0.3357386223782565 1.0 ['ENST00000367519.8_2_6:146056790-146056913:-|nuORF'] 97393 17245 SGDVANLRLAA True H1975_Epitope_Rep2 1085.58292151849 1085.58182993586 71.624 2 -1.0927310432492272 0.3357472276919888 1.0 ['ENST00000369651.7_1_6:86159527-86159740:+|nuORF'] 62361 18586 LLRNRNFWVLR True NCI_RA007_Epitope_Rep4 1485.86808534401 1485.8669899358601 80.399 2 -1.0928405319323724 0.3358076509528066 1.0 ['ENSG00000170265|ENST00000610704|ZNF282', 'nc|ENSG00000170265|Q9UDV7-2|ZNF282'] 66556 9992 LSSKAKAQ True PC9_epitope_Rep3 831.48141657207 831.48030993586 43.39 2 -1.0929780829864366 0.3358550202728085 1.0 ['nc|ENSG00000134369|Q8NEY1-6|NAV1', 'nc|ENSG00000134369|Q8NEY1-7|NAV1', 'nc|ENSG00000134369|Q8NEY1-4|NAV1', 'nc|ENSG00000134369|Q8NEY1-2|NAV1', 'nc|ENSG00000134369|Q8NEY1-3|NAV1', 'nc|ENSG00000134369|Q8NEY1|NAV1', 'ENSG00000134369|ENST00000685211|NAV1', 'NAV1|p.S844Vfs*19|1|0.21|ENSG00000134369|chr1:201783573-201783573|C/-|frameshift_variant'] 92169 11015 RQEREKKYREE True H1975_Epitope_Rep3 1549.7961021722097 1549.7950099358602 47.459 2 -1.0930117838754625 0.3358550202728085 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 122097 21204 VGREGRLP True PC9_epitope_Rep6 882.5035489989798 882.5030049679301 94.41 1 -1.0930232107040891 0.3358550202728085 1.0 ['ENST00000243440.1_1_1:212870399-212873318:-|nuORF'] 137870 18214 YPKKFLKRS True PC9_epitope_Rep4 1165.69716342509 1165.69552490379 78.128 3 -1.0930335923115237 0.3358550202728085 1.0 ['ENST00000261716.7_1_17:27870369-27870516:+|nuORF'] 64906 8249 LSAVVDLNGRY True NCI_RA007_Epitope_Rep1 1205.6404363946099 1205.6393299358601 36.086 2 -1.0931029790481728 0.3358636234099329 1.0 ['ENST00000465906.5_1_10:6157393-6157516:+|nuORF'] 123231 24430 VHLVRYPRAV True PC9_epitope_Rep4 1208.7142104715601 1208.71310993586 102.45 2 -1.0931210097977415 0.3358722263241752 1.0 ['CHST5|p.D225Y|1|0.18|ENSG00000135702|chr16:75529712-75529712|C/A|missense_variant'] 36617 15011 GVLLHLQSV True PC9_epitope_Rep3 964.5705659296401 964.56946993586 62.866 2 -1.0931480013261399 0.33588082901554406 1.0 ['ENST00000511909.5_1_4:122053805-122071269:-|nuORF'] 102442 9740 SPWSTSPL True H1975_Epitope_Rep2 873.42323298961 873.4226849679301 42.451 1 -1.0932425028346888 0.3359368928266107 1.0 ['ENSG00000184486|ENST00000328345|POU3F2'] 13582 4108 DPPVQRDEEEE True NCI_RA007_Epitope_Rep3 1341.56845322281 1341.5673499358602 22.697 2 -1.093265328890187 0.3359368928266107 1.0 ['ENSG00000107949|ENST00000278100|BCCIP', 'nc|ENSG00000107949|Q9P287-4|BCCIP', 'nc|ENSG00000107949|Q9P287-3|BCCIP', 'nc|ENSG00000107949|Q9P287-2|BCCIP'] 88526 9711 RADWRRRQLRK True PC9_epitope_Rep1 1539.8970940565098 1539.89489987172 42.211 4 -1.0933788199090817 0.3359670483394643 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1', 'MAP3K1|p.T946Kfs*22|1|0.62|ENSG00000095015|chr5:56882037-56882037|C/-|frameshift_variant', 'MAP3K1|p.T947Nfs*56|1|0.61|ENSG00000095015|chr5:56882039-56882040|AC/-|frameshift_variant'] 103854 12647 SRKFGSIPSP True PC9_epitope_Rep2 1074.5821932425 1074.58108993586 53.955 2 -1.0934219078251923 0.3359670483394643 1.0 ['ENST00000492897.3_1_17:46669706-46679621:+|nuORF', 'ENST00000474324.1_1_17:46673424-46679621:+|nuORF', 'ENST00000429755.8_1_17:46669689-46679621:+|nuORF', 'ENST00000481995.5_1_17:46673424-46679621:+|nuORF'] 125679 22850 VMVALSSLLV True PC9_epitope_Rep2 1030.6096538602999 1030.60854993586 93.382 2 -1.093583011009608 0.33605336441940287 1.0 ['ENSG00000132670|ENST00000399903|PTPRA', 'nc|ENSG00000132670|P18433-6|PTPRA', 'PTPRA|p.I165Sfs*6|1|0.11|ENSG00000132670|chr20:2986815-2986815|A/-|frameshift_variant'] 66942 10445 LSYMAYWK True PC9_epitope_Rep4 1060.50518879176 1060.50408993586 47.888 2 -1.0936407740132574 0.33607491645727017 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 46604 13572 ITSRCRQYH True PC9_epitope_Rep1 1162.5665602617 1162.56490490379 57.06 3 -1.0937260115758713 0.3360835157433911 1.0 ['ENST00000556883.1_1_14:93650687-93651102:-|nuORF'] 125837 10725 VNPFLYCFVGN True H1975_Epitope_Rep1 1271.6008800817497 1271.6003749679298 46.215 1 -1.0937306647179308 0.33609211480675577 1.0 ['ENSG00000180772|ENST00000371906|AGTR2'] 131126 14239 VVPAPRHW True PC9_epitope_Rep4 960.529369824 960.52826993586 62.676 2 -1.0937326905824856 0.33611366550531674 1.0 ['ENST00000413658.6_1_7:99677240-99679302:-|nuORF'] 140026 13709 YVLLASEQL True PC9_epitope_Rep1 1034.5648118428599 1034.56370993586 57.582 2 -1.0937910716931938 0.33611791066039814 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 36445 1696 GVIKSPSWQRP True H1975_Epitope_Rep2 1253.6880552933699 1253.6863949037902 9.1382 3 -1.0937943170650917 0.33611791066039814 1.0 ['ENSG00000163110|ENST00000317968|PDLIM5', 'nc|ENSG00000163110|Q96HC4-7|PDLIM5', 'nc|ENSG00000163110|Q96HC4-4|PDLIM5', 'nc|ENSG00000163110|Q96HC4-6|PDLIM5'] 47922 11542 IYWSDEHHPP True PC9_epitope_Rep3 1279.56218607391 1279.56108993586 49.407 2 -1.093947520804441 0.3361480579695129 1.0 ['APCDD1|p.R272W|1|0.4|ENSG00000154856|chr18:10485501-10485501|C/T|missense_variant'] 67211 2767 LTDKHIYQPY True H1975_Epitope_Rep2 1276.64518742188 1276.6435349037902 14.672 3 -1.0940156259800606 0.3361480579695129 1.0 ['ENSG00000141458|ENST00000269228|NPC1', 'nc|ENSG00000141458|O15118-2|NPC1', 'ENST00000540608.5_1_18:21119776-21166285:-|nuORF'] 80603 15359 PLPEVVHIQL True NCI_RA007_Epitope_Rep5 1143.66519459047 1143.6640899358601 65.784 2 -1.094082123205317 0.336186800663075 1.0 ['ENSG00000166856|ENST00000300098|GPR182'] 125060 25091 VLPGKKKKKT True H1975_Epitope_Rep2 1125.75976368165 1125.75811490379 103.1 3 -1.0940940916098503 0.336186800663075 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 118273 17461 VCRVVKKKHW True NCI_RA007_Epitope_Rep5 1281.74921608129 1281.7481099358602 73.949 2 -1.0941096576053135 0.336186800663075 1.0 ['RASGEF1A|p.R290W|1|0.33|ENSG00000198915|chr10:43199176-43199176|G/A|missense_variant'] 60600 24567 LISKLTTKL True PC9_epitope_Rep4 1015.66413196131 1015.66302993586 102.99 2 -1.0941388184875838 0.3361953973865859 1.0 ['L1M3_dup291|chr1:173794566-173795729:+|1.1397011898258065|0.3648644439828962|1.64|502.0|40|3|sense'] 128093 10006 VRRPRRIQR True NCI_RA007_Epitope_Rep2 1235.77993904595 1235.77828490379 43.533 3 -1.0941858042663737 0.3362298945841643 1.0 ['ENST00000499521.2_1_5:148878853-148880688:-|nuORF'] 60619 18960 LISRRSRHRA True NCI_RA007_Epitope_Rep3 1250.74321918406 1250.74212993586 82.862 2 -1.0942411775851586 0.33625534118865724 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-2|INPP5F'] 69385 8115 LVQIPIFFFTV True H1975_Epitope_Rep1 1322.7638460025798 1322.76274993586 36.159 2 -1.0942724006253535 0.33625534118865724 1.0 ['ENSG00000172209|ENST00000304402|GPR22'] 39562 24822 HPHVHLLLLHH True PC9_epitope_Rep2 1351.7625576463101 1351.76146993586 101.17 2 -1.0943043881677272 0.33625534118865724 1.0 ['ENST00000231706.5_1_3:170198310-170198370:-|nuORF'] 2079 13546 AELKHHHVT True H1975_Epitope_Rep3 1070.56212650426 1070.56102993586 57.387 2 -1.0943230870317537 0.33625534118865724 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 25469 22011 FENGNYRRRKR True PC9_epitope_Rep2 1494.79162592846 1494.7905299358601 90.138 2 -1.0943588812869767 0.33625534118865724 1.0 ['ENSG00000176678|ENST00000320241|FOXL1'] 30504 12680 GAHACARA True H1975_Epitope_Rep2 755.34969120987 755.3491449679301 53.875 1 -1.0943624972974055 0.33625534118865724 1.0 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 112708 10655 TPGSGELGRIL True H1975_Epitope_Rep1 1098.6033226098998 1098.6022299358601 45.941 2 -1.0943854149393026 0.33625534118865724 1.0 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000494046.5_1_9:139914760-139922592:-|nuORF', 'ENST00000464876.5_1_9:139914760-139916113:-|nuORF'] 22474 4162 ETHIRVPA True PC9_epitope_Rep2 921.50321464581 921.50210993586 21.319 2 -1.0943996471936195 0.33625534118865724 1.0 ['ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 75098 1170 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 6.4809 3 -1.0944423142341586 0.33625534118865724 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 47953 8552 KAAQVTAG True PC9_epitope_Rep4 744.4130026590799 744.4124549679301 40.374 1 -1.0944486250147059 0.33625534118865724 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 12095 14949 DIFKHLRWWW True NCI_RA007_Epitope_Rep2 1485.7669743204099 1485.76586993586 62.829 2 -1.0944633411397888 0.33625534118865724 1.0 ['ENST00000575955.1_1_17:4120189-4167236:-|nuORF'] 45343 10401 ISDEFSEVIK True PC9_epitope_Rep1 1165.58666948625 1165.5855699358601 44.891 2 -1.0944794002590628 0.33625534118865724 1.0 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENSG00000013016|ENST00000322054|EHD3'] 61668 18586 LLHPPPLSL True PC9_epitope_Rep5 985.59605240149 985.59494993586 76.516 2 -1.0944936012121753 0.33627688363480984 1.0 ['ENST00000583260.1_1_17:62009328-62009508:-|nuORF'] 131462 25065 VVTVGVITVL True NCI_RA007_Epitope_Rep5 998.6375828603 998.63703496793 103.92 1 -1.0945069708145425 0.33628547752227056 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 128296 16108 VSAVLQTQ True PC9_epitope_Rep6 844.46543215476 844.46432993586 74.299 2 -1.0945698224152853 0.3363285599606391 1.0 ['nc|ENSG00000129103|Q8NBJ7-3|SUMF2', 'nc|ENSG00000129103|Q8NBJ7-4|SUMF2'] 85852 9247 QNELGFGRM True H1975_Epitope_Rep1 1050.49166398594 1050.49056993586 40.48 2 -1.0945871452972744 0.3363285599606391 1.0 ['ENST00000366955.7_1_1:214776590-214787168:+|nuORF'] 122419 6107 VGSITETL True NCI_RA007_Epitope_Rep3 818.43854870058 818.43744993586 31.01 2 -1.0946313832628367 0.3363327981770159 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 33258 10244 GLALLWYDWLP True NCI_RA007_Epitope_Rep2 1345.7070594024499 1345.7059699358601 44.439 2 -1.094642148666406 0.3363327981770159 1.0 ['ENST00000555918.1_1_14:36295434-36295554:-|nuORF'] 135658 13250 YEFPSSGP True H1975_Epitope_Rep1 882.3759484440199 882.3753949679301 56.062 1 -1.094654172717349 0.3363499831689065 1.0 ['ENST00000420737.1_1:146016970-146019748:+|nuORF'] 122131 21627 VGRHQERR True PC9_epitope_Rep6 1036.5638578397597 1036.5632749679298 96.072 1 -1.0946644036378617 0.3363499831689065 1.0 ['ENST00000505764.5_1_4:156680186-156693798:+|nuORF'] 59272 12451 LGGSFLGPPLP True PC9_epitope_Rep3 1053.5858816406098 1053.58478993586 52.917 2 -1.0946990630141482 0.3363715221584951 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 108020 7365 TDDPGHHII True NCI_RA007_Epitope_Rep1 1003.4723084403502 1003.47120993586 32.643 2 -1.0947739289831082 0.3364016519723981 1.0 ['ENST00000570989.1_1_17:48141869-48142148:+|nuORF'] 117780 9902 VALQQYPP True PC9_epitope_Rep2 914.48616759934 914.48506993586 43.419 2 -1.0948134166819108 0.3364016519723981 1.0 ['ENST00000481001.5_1_3:49053397-49053514:-|nuORF', 'ENST00000460505.5_1_3:49053078-49053514:-|nuORF'] 111369 16214 TLIPILST True H1975_Epitope_Rep2 856.5269697821601 856.52586993586 67.576 2 -1.0948233919615824 0.33641000414250205 1.0 ['ENSG00000109084|ENST00000226230|TMEM97'] 90822 18303 RKTAHARVRTN True NCI_RA007_Epitope_Rep1 1308.7486984873196 1308.74760993586 75.333 2 -1.0948441451007176 0.33641000414250205 1.0 ['ENST00000377242.7_1_10:20569198-20569261:+|nuORF'] 104104 8837 SRWDYEKKQWK True NCI_RA007_Epitope_Rep1 1552.7786612029201 1552.77700490379 38.373 3 -1.0948534419217704 0.33641000414250205 1.0 ['ENSG00000131055|ENST00000376075|COX4I2'] 122444 15477 VGSLIVKVS True PC9_epitope_Rep1 900.56441792004 900.56332993586 64.353 2 -1.0948599621303154 0.33641000414250205 1.0 ['ENSG00000177839|ENST00000316105|PCDHB9', 'PCDHB9|p.H773Tfs*11|1|0.14|ENSG00000177839|chr5:141189630-141189630|C/-|frameshift_variant', 'PCDHB9|p.Q453Kfs*89|1|0.1|ENSG00000177839|chr5:141188673-141188673|C/-|frameshift_variant'] 107883 4352 TATAPPKPP True H1975_Epitope_Rep2 878.4861675993399 878.48506993586 21.856 2 -1.0948801590978323 0.33641000414250205 1.0 ['ENSG00000136367|ENST00000419474|ZFHX2'] 122390 7132 VGSGHLPV True NCI_RA007_Epitope_Rep3 764.41808803952 764.41698993586 35.174 2 -1.0948850837140627 0.33641000414250205 1.0 ['nc|ENSG00000075856|Q15020-3|SART3'] 19786 14146 ELTHLYWLWY True H1975_Epitope_Rep2 1422.69722299474 1422.6961299358602 59.567 2 -1.0948861301848185 0.33641000414250205 1.0 ['nc|ENSG00000177595|Q9HB75-3|PIDD1'] 57147 10802 LEERELSV True PC9_epitope_Rep3 973.5080252427299 973.50692993586 46.517 2 -1.094966509311314 0.3364314192512815 1.0 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'nc|ENSG00000198276|Q9NWZ5-3|UCKL1'] 122420 8809 VGSITETL True PC9_epitope_Rep1 818.43854870058 818.43744993586 38.726 2 -1.0949795020693374 0.3364314192512815 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 22566 5841 ETMDQYHFCY True H1975_Epitope_Rep1 1335.49000930343 1335.4889099358602 27.538 2 -1.094997118844561 0.3364314192512815 1.0 ['nc|ENSG00000060656|Q92729-3|PTPRU', 'ENSG00000060656|ENST00000373779|PTPRU', 'nc|ENSG00000060656|Q92729-4|PTPRU', 'nc|ENSG00000060656|Q92729|PTPRU', 'ENST00000465525.6_1_1:29647190-29652170:+|nuORF'] 75099 1231 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 6.8163 3 -1.094997472530966 0.3364314192512815 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 128029 23323 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75544490379 102.81 3 -1.0950311900313054 0.33644000880224717 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 71738 21006 MMIQGHTTIPR True NCI_RA007_Epitope_Rep5 1283.64784735751 1283.64619490379 87.809 3 -1.0950737614073451 0.3364442430910621 1.0 ['ENST00000504445.1_1_4:47514609-47514774:+|nuORF'] 45821 6200 ISPLSDASLDL True NCI_RA007_Epitope_Rep4 1129.58666948625 1129.5855699358601 30.458 2 -1.0950837834815939 0.3364442430910621 1.0 ['GLI2|p.Q1236Sfs*2|1|0.25|ENSG00000074047|chr2:120989667-120989667|C/-|frameshift_variant', 'ENSG00000074047|ENST00000361492|GLI2', 'nc|ENSG00000074047|P10070|GLI2', 'nc|ENSG00000111087|P08151-2|GLI1', 'ENSG00000111087|ENST00000228682|GLI1'] 100099 6724 SLKYECRPEYY True NCI_RA007_Epitope_Rep2 1449.6598515098501 1449.6587499358602 30.769 2 -1.0952269185426677 0.3365175520347934 1.0 ['nc|ENSG00000203710|P17927|CR1', 'ENSG00000203710|ENST00000367049|CR1', 'ENST00000436595.1_1_1:207669690-207743292:+|nuORF', 'ENST00000434033.5_1_1:207669690-207707642:+|nuORF', 'ENST00000367050.8_1_1:207669597-207732429:+|nuORF'] 64343 15370 LQNRRLFQSLH True PC9_epitope_Rep2 1410.7844152896998 1410.7833099358602 64.403 2 -1.0953631961590382 0.33655202764798015 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 62331 12420 LLRGLWQRWRR True NCI_RA007_Epitope_Rep1 1538.9058678350598 1538.90476993586 52.286 2 -1.0953874562371944 0.33657355872531 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9'] 7591 20588 ASHLFTLTV True PC9_epitope_Rep5 987.53893144819 987.53782993586 84.239 2 -1.0955497368464608 0.3366423773345586 1.0 ['nc|ENSG00000114790|Q96DR7-4|ARHGEF26', 'ENSG00000114790|ENST00000465093|ARHGEF26'] 121191 13950 VGGLMKKP True PC9_epitope_Rep6 828.4891448047999 828.48804993586 65.511 2 -1.0955681370865402 0.3366423773345586 1.0 ['UGT3A2|p.E273K|1|0.26|ENSG00000168671|chr5:36048915-36048915|C/T|missense_variant'] 42175 9201 IEFSREEWEHL True NCI_RA007_Epitope_Rep1 1473.6888431390098 1473.68719490379 39.791 3 -1.0955693079527833 0.3366423773345586 1.0 ['ENSG00000197302|ENST00000316491|KRBOX5', 'ENST00000529943.6_1_16:31724760-31765604:+|nuORF', 'ENST00000534277.5_1_16:31724760-31767037:+|nuORF'] 68073 11283 LTNTEIPLQLV True H1975_Epitope_Rep1 1239.7074533252699 1239.70634993586 48.377 2 -1.0955868109110514 0.3366423773345586 1.0 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3', 'nc|ENSG00000172845|Q02447-4|SP3', 'nc|ENSG00000172845|Q02447-3|SP3', 'ENST00000465379.1_1_2:174774671-174778005:-|nuORF'] 122128 10268 VGRGYASP True PC9_epitope_Rep3 805.4082516318099 805.40714993586 44.443 2 -1.0955893100735588 0.3366423773345586 1.0 ['ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1'] 32275 24741 GFQRNIFWKV True H1975_Epitope_Rep1 1293.69822605425 1293.6965849037902 102.48 3 -1.0957154377873322 0.33665954830777195 1.0 ['SLC6A5|p.P673R|1|0.63|ENSG00000165970|chr11:20646882-20646882|C/G|missense_variant'] 83359 8257 QAQILEPKP True H1975_Epitope_Rep1 1022.5760452328999 1022.57494993586 36.699 2 -1.0957177386218049 0.33665954830777195 1.0 ['nc|ENSG00000159267|P50747|HLCS', 'ENSG00000159267|ENST00000674895|HLCS'] 103100 23784 SQLLLRRHA True H1975_Epitope_Rep2 1092.6516102150001 1092.65050993586 97.991 2 -1.0957434260149665 0.33666813346103075 1.0 ['nc|ENSG00000168079|Q6ZMJ2-3|SCARA5', 'nc|ENSG00000168079|Q6ZMJ2-2|SCARA5', 'ENSG00000168079|ENST00000354914|SCARA5'] 23174 12454 EVPGKPHLE True PC9_epitope_Rep1 1004.52909504048 1004.52798993586 52.77 2 -1.0958031868420446 0.3366982450691101 1.0 ['LETM2|p.Q92H|1|0.07|ENSG00000165046|chr8:38392770-38392770|G/T|missense_variant'] 85410 13916 QLELHRLI True PC9_epitope_Rep1 1020.6080140675199 1020.60690993586 58.363 2 -1.0958664113687968 0.3366982450691101 1.0 ['ENSG00000166507|ENST00000309979|NDST2', 'nc|ENSG00000166507|P52849-2|NDST2'] 37271 5724 GVVLFSPFPE True H1975_Epitope_Rep3 1090.5698972233 1090.5688099358601 27.046 2 -1.09593281159173 0.3367068293882411 1.0 ['ENST00000490691.1_1_3:4345355-4357899:+|nuORF'] 42402 6125 IEPAKETTT True PC9_epitope_Rep6 988.5076908895601 988.50658993586 31.976 2 -1.095972136185223 0.3367154134851818 1.0 ['nc|ENSG00000173262|Q8TDB8-4|SLC2A14', 'ENSG00000059804|ENST00000075120|SLC2A3', 'ENSG00000173262|ENST00000431042|SLC2A14', 'nc|ENSG00000173262|Q8TDB8|SLC2A14', 'nc|ENSG00000173262|Q8TDB8-5|SLC2A14', 'ENST00000469295.1_1_12:8074011-8075632:-|nuORF', 'nc|ENSG00000173262|Q8TDB8-3|SLC2A14'] 110668 9978 TIWIEHRL True H1975_Epitope_Rep3 1066.59236400338 1066.59126993586 43.416 2 -1.0961474133128104 0.33681022880215344 1.0 ['ENSG00000176231|ENST00000322107|OR10H4', 'OR10H4|p.K263Sfs*13|1|0.24|ENSG00000176231|chr19:15949794-15949794|A/-|frameshift_variant'] 119454 9867 VEPRWRPPRD True H1975_Epitope_Rep1 1306.6894522756998 1306.68781490379 42.886 3 -1.0961484026248367 0.33681022880215344 1.0 ['ENST00000472949.1_2_13:77589696-77601209:-|nuORF'] 43897 8272 ILDLYIPPP True NCI_RA007_Epitope_Rep5 1039.5953836951498 1039.5942899358602 38.496 2 -1.0962720973500129 0.3368446934893171 1.0 ['nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENSG00000153721|ENST00000607772|CNKSR3', 'ENST00000433165.6_1_6:154727490-154754936:-|nuORF'] 68132 10528 LTPLCGSLSL True PC9_epitope_Rep5 1002.5419682233 1002.54086993586 45.484 2 -1.0963172054997083 0.33685749780009316 1.0 ['ENST00000218981.5_1_13:52342325-52342490:-|nuORF'] 82601 4726 PVKGHAGK True NCI_RA007_Epitope_Rep4 792.4606215578399 792.45952993586 24.609 2 -1.0963450221940112 0.33685749780009316 1.0 ['DMRTB1|p.L233Cfs*77|1|0.17|ENSG00000143006|chr1:53461588-53461588|C/-|frameshift_variant', 'ENSG00000143006|ENST00000371445|DMRTB1'] 56522 20232 LDTWWRQRQL True PC9_epitope_Rep3 1400.7313170876798 1400.73022993586 83.083 2 -1.0963822209851002 0.33685749780009316 1.0 ['CSF3R|p.R337T|1|0.56|ENSG00000119535|chr1:36472127-36472127|C/G|missense_variant', 'ENST00000480825.6_1_1:36937516-36938309:-|nuORF', 'ENST00000487540.6_1_1:36933583-36937977:-|nuORF', 'ENST00000464365.2_1_1:36934562-36941005:-|nuORF', 'nc|ENSG00000119535|Q99062-2|CSF3R', 'ENSG00000119535|ENST00000373106|CSF3R', 'nc|ENSG00000119535|Q99062-3|CSF3R', 'nc|ENSG00000119535|Q99062-4|CSF3R'] 62511 14045 LLSSRGRT True PC9_epitope_Rep4 888.51411368268 888.5130099358599 61.934 2 -1.0964132551022976 0.3368615830540495 1.0 ['ENST00000368408.3_1_1:155059141-155059444:+|nuORF'] 83821 5596 QEETKTVL True PC9_epitope_Rep6 946.4971262058599 946.49602993586 29.58 2 -1.0964489239851483 0.3368615830540495 1.0 ['nc|ENSG00000164037|Q4ZJI4-3|SLC9B1', 'ENSG00000164037|ENST00000296422|SLC9B1', 'nc|ENSG00000164037|Q4ZJI4-5|SLC9B1'] 80558 15659 PLMLSLPAL True PC9_epitope_Rep2 953.5619753918899 953.56086993586 65.508 2 -1.0964908082281464 0.3368615830540495 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 117684 8527 VAKKIRERKEK True NCI_RA007_Epitope_Rep4 1383.8674166376697 1383.86630993586 39.591 2 -1.0964952543064317 0.3368615830540495 1.0 ['ENSG00000197077|ENST00000358431|KIAA1671'] 130981 18716 VVKKTTTP True NCI_RA007_Epitope_Rep2 872.53311779176 872.53202993586 77.6 2 -1.0965020061541355 0.3368615830540495 1.0 ['ENSG00000121361|ENST00000240662|KCNJ8'] 98449 6361 SIKADDKL True NCI_RA007_Epitope_Rep1 888.4916469026 888.49054993586 28.769 2 -1.0965272333316003 0.3368701638156362 1.0 ['ENSG00000168924|ENST00000302787|LETM1', 'ENST00000511977.1_1_4:1824675-1834605:-|nuORF', 'WHSC1-LETM1|1|fusion'] 58737 9550 LFLKKVSVP True NCI_RA007_Epitope_Rep5 1029.65865265805 1029.65754993586 43.371 2 -1.0965731659967681 0.33689168381144624 1.0 ['ENST00000570069.5_1_16:1827428-1828166:+|nuORF'] 88781 4780 RDLWRHFRKV True PC9_epitope_Rep6 1411.79492040375 1411.79326490379 25.848 3 -1.0966073056928645 0.33689590476806625 1.0 ['ENST00000563230.1_1_16:79123974-79135149:+|nuORF'] 64338 10835 LQNRRLFQSLH True NCI_RA007_Epitope_Rep1 1410.7844152896998 1410.7833099358602 46.14 2 -1.0966248281974913 0.33689590476806625 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 69197 14533 LVMLGAGGVGK True PC9_epitope_Rep1 1000.5739370579198 1000.57282993586 60.726 2 -1.0967054721161111 0.33691742359547655 1.0 ['ENSG00000143622|ENST00000368323|RIT1', 'nc|ENSG00000143622|Q92963-3|RIT1', 'ENST00000462687.1_1_1:155880190-155880552:-|nuORF'] 100522 8020 SLPSGPQGAHT True PC9_epitope_Rep2 1050.5094222250598 1050.50832993586 36.209 2 -1.0967236396697448 0.3369260030794312 1.0 ['ENST00000390548.6_1_14:106203725-106203890:-|nuORF'] 131482 12143 VVVAKGTL True PC9_epitope_Rep2 785.50108938749 785.49998993586 52.018 2 -1.096769816403723 0.3369475209605631 1.0 ['nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 76684 16764 NTLERREKHEK True PC9_epitope_Rep5 1438.7640737679396 1438.7629699358602 69.487 2 -1.0968070194853001 0.336956099833094 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 32284 14649 GFSCYCPL True PC9_epitope_Rep3 888.3509966494798 888.34988993586 61.481 2 -1.0968997616701481 0.3369776167680166 1.0 ['ENST00000315970.11_1_12:58114859-58115021:+|nuORF'] 48252 3807 KDFVFDIYR True H1975_Epitope_Rep3 1201.6131590176099 1201.61152490379 19.735 3 -1.096987693440966 0.3370379474971213 1.0 ['CDC123|p.E228K|1|0.19|ENSG00000151465|chr10:12237260-12237260|G/A|missense_variant'] 87270 19352 QSSKITRTI True PC9_epitope_Rep3 1032.5927579262 1032.5916699358602 79.659 2 -1.0970514278366388 0.33704652486673914 1.0 ['A2M|p.E342K|1|0.05|ENSG00000175899|chr12:9106316-9106316|C/T|missense_variant'] 38270 11567 HFFHEDEEP True PC9_epitope_Rep1 1185.47270236317 1185.4716099358602 49.372 2 -1.0971141918160687 0.33706789484578764 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'CHD8|p.Y756Pfs*9|1|0.24|ENSG00000100888|chr14:21409949-21409950|-/GG|frameshift_variant'] 22672 4966 ETSSQRKAENI True NCI_RA007_Epitope_Rep2 1261.6262428824498 1261.62514993586 23.938 2 -1.097117427610279 0.33706789484578764 1.0 ['DOCK11|p.G298R|1|0.03|ENSG00000147251|chrX:118566594-118566594|G/A|missense_variant'] 46026 8297 ISVKVIDDEEY True NCI_RA007_Epitope_Rep1 1308.64491263836 1308.6438099358602 36.274 2 -1.0971549774786433 0.33706789484578764 1.0 ['nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1'] 39982 7861 HQQYRHNMTWK True NCI_RA007_Epitope_Rep1 1527.71534975371 1527.7142499358602 34.569 2 -1.0971684881340353 0.33706789484578764 1.0 ['ENSG00000257743|ENST00000477922|MGAM2', 'nc|ENSG00000257743|Q2M2H8-3|MGAM2'] 18941 9852 ELFDEILL True PC9_epitope_Rep5 990.52736370498 990.52626993586 42.865 2 -1.0971829430214843 0.3370846107079566 1.0 ['nc|ENSG00000185261|Q8IV33-3|KIAA0825', 'nc|ENSG00000185261|Q8IV33|KIAA0825', 'ENSG00000185261|ENST00000682413|KIAA0825'] 80950 22483 PMVVVPVDV True PC9_epitope_Rep5 953.5255898831698 953.52448993586 91.482 2 -1.0972009399878737 0.3370846107079566 1.0 ['nc|ENSG00000120899|Q14289-2|PTK2B', 'ENSG00000120899|ENST00000346049|PTK2B'] 45468 16858 ISEIKNKQRRH True H1975_Epitope_Rep1 1407.80587901027 1407.80478993586 70.253 2 -1.0972054051470583 0.3370846107079566 1.0 ['ENSG00000117133|ENST00000370654|RPF1'] 44168 13485 ILQLQNKLEHY True H1975_Epitope_Rep3 1397.7666995368902 1397.76560993586 57.146 2 -1.0972325337821738 0.3370846107079566 1.0 ['TMCC1|p.K297N|2|0.21|ENSG00000172765|chr3:129670950-129670950|C/A|missense_variant'] 803 4693 ACTVPRADP True H1975_Epitope_Rep2 928.44365116436 928.44254993586 23.146 2 -1.0972471991136756 0.3370846107079566 1.0 ['ENST00000360862.9_2_16:3534964-3535998:+|nuORF', 'ENST00000407558.8_1_16:3534861-3535998:+|nuORF'] 120214 19107 VFLWKLFE True PC9_epitope_Rep4 1080.60080342876 1080.5997099358601 81.586 2 -1.0972562514928053 0.3370846107079566 1.0 ['ENST00000234111.8_1_2:10580547-10580775:-|nuORF'] 77908 18415 PAHRWSWTT True NCI_RA007_Epitope_Rep5 1140.54647644012 1140.54484490379 77.649 3 -1.0972984379658008 0.3370846107079566 1.0 ['ENST00000356613.3_2_8:143695553-143695679:-|nuORF'] 82293 23612 PTPLLQEAWPP True H1975_Epitope_Rep1 1247.65502382959 1247.6533649037901 98.058 3 -1.0973008796850359 0.3370846107079566 1.0 ['ENST00000430334.7_1_17:43514711-43515125:-|nuORF'] 68470 19767 LTVEKSEL True PC9_epitope_Rep4 917.50696261357 917.50586993586 84.157 2 -1.097319876581165 0.3370846107079566 1.0 ['ENSG00000123104|ENST00000381340|ITPR2'] 106523 6340 SVVRFDKDERE True NCI_RA007_Epitope_Rep5 1378.6840921117398 1378.6829899358602 31.062 2 -1.0973764884047714 0.3370846107079566 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 93354 14027 RRTVPKPRVK True PC9_epitope_Rep2 1235.7938577745897 1235.79220490379 59.234 3 -1.0974008938591906 0.3370846107079566 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000173575|O14647-3|CHD2'] 62661 15843 LLVVMPYDRYV True PC9_epitope_Rep1 1366.7318942513 1366.73023490379 65.754 3 -1.0974696758480693 0.3371146955723137 1.0 ['OR4A16|p.A117P|1|0.18|ENSG00000181961|chr11:55343549-55343549|G/C|missense_variant'] 130308 17408 VTTLLTTI True PC9_epitope_Rep5 860.5218844017201 860.5213349679301 71.96 1 -1.0974745488715616 0.3371146955723137 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A', 'MUC3A|p.S2662Ffs*13|3|0.16|ENSG00000169894|chr7:100959764-100959764|C/-|frameshift_variant', 'MUC3A|p.T2783Hfs*2|1|0.21|ENSG00000169894|chr7:100960120-100960121|-/C|frameshift_variant'] 125010 13375 VLNVSLRSP True PC9_epitope_Rep5 983.57637958607 983.57528993586 56.463 2 -1.097581864538886 0.33712312289007024 1.0 ['nc|ENSG00000196811|P07510-2|CHRNG', 'ENSG00000196811|ENST00000651502|CHRNG'] 128030 23421 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75544490379 103.19 3 -1.0976033169118111 0.33712312289007024 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 53280 24591 KTIEITKITKV True PC9_epitope_Rep2 1272.80168806328 1272.8000549037902 100.22 3 -1.0976380181803134 0.33712312289007024 1.0 ['nc|ENSG00000107614|O14717-5|TRDMT1'] 20468 13858 EPSKGRGR True PC9_epitope_Rep5 885.4780625271299 885.47696993586 58.325 2 -1.0976410374072103 0.33712312289007024 1.0 ['ENSG00000197976|ENST00000313871|AKAP17A', 'ENST00000474361.6_1_X:1719073-1720484:+|nuORF'] 22473 4331 ETHIRVPA True PC9_epitope_Rep1 921.50321464581 921.50210993586 21.545 2 -1.0976774743299196 0.33713169671728277 1.0 ['ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 23029 5075 EVKIRERQRAQ True NCI_RA007_Epitope_Rep1 1411.80079362983 1411.79914490379 23.825 3 -1.0977035888721154 0.33715320442346247 1.0 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2', 'ENST00000486886.1_1_3:111680917-111693407:+|nuORF', 'FARSB-PHLDB2|1|fusion'] 99971 3382 SLIPNEDVRK True NCI_RA007_Epitope_Rep2 1169.6404363946097 1169.63878490379 17.815 3 -1.0977441663682503 0.3371617776398158 1.0 ['ENSG00000185158|ENST00000543378|LRRC37B', 'nc|ENSG00000185158|Q96QE4-2|LRRC37B', 'nc|ENSG00000185158|Q96QE4|LRRC37B', 'ENST00000579766.1_1_17:30376071-30377294:+|nuORF', 'ENST00000417404.2_1_17:28960066-28961284:+|nuORF', 'ENST00000579094.1_1_17:30374694-30380344:+|nuORF'] 63532 13165 LPKTGRVSSL True NCI_RA007_Epitope_Rep4 1056.62914343492 1056.6280499358602 57.74 2 -1.0978270552606912 0.3372047906050338 1.0 ['FAM47C|p.P803L|1|0.11|ENSG00000198173|chrX:37010818-37010818|C/T|missense_variant'] 36938 12758 GVREVFEMATR True PC9_epitope_Rep2 1293.6499555324897 1293.64831490379 54.378 3 -1.0978702644455696 0.3372047906050338 1.0 ['ENST00000473074.1_1_1:113244164-113245337:-|nuORF', 'ENSG00000155366|ENST00000339083|RHOC', 'ENSG00000067560|ENST00000418115|RHOA'] 123631 23461 VILLKIKLHGR True H1975_Epitope_Rep2 1288.87071111296 1288.8696099358601 96.717 2 -1.0979602878790569 0.33723441399733606 1.0 ['ENST00000443046.5_1_21:40717793-40719323:-|nuORF'] 139730 7586 YTWRWVWSWEW True PC9_epitope_Rep5 1683.7622828627896 1683.76063490379 34.127 3 -1.097963079278017 0.33723441399733606 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 90131 7762 RGSRWWLRRYQ True NCI_RA007_Epitope_Rep2 1562.83309681762 1562.83198993586 34.819 2 -1.097993589306189 0.33723441399733606 1.0 ['ENSG00000173237|ENST00000683896|C11orf86', 'nc|nan|A6NJI1|C11orf86'] 136779 8920 YIRKNVIPH True PC9_epitope_Rep4 1138.66111226954 1138.65946490379 41.852 3 -1.0980230450837876 0.33723441399733606 1.0 ['ENSG00000081177|ENST00000685843|EXD2', 'nc|ENSG00000081177|Q9NVH0-2|EXD2'] 43109 7213 IGLYEPELG True H1975_Epitope_Rep3 989.5069626135698 989.50586993586 32.716 2 -1.098025246840828 0.33723441399733606 1.0 ['nc|ENSG00000186998|Q96A84-2|EMID1', 'nc|ENSG00000186998|Q96A84|EMID1', 'ENSG00000186998|ENST00000334018|EMID1'] 125066 25899 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 107.19 3 -1.0980921317612529 0.33723441399733606 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 139994 10031 YVKGEKLTRCK True H1975_Epitope_Rep1 1323.7332912336299 1323.73218993586 43.523 2 -1.0980956094738605 0.33723441399733606 1.0 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 99647 5292 SLFWPWAP True H1975_Epitope_Rep3 1002.4963383602199 1002.49524993586 25.435 2 -1.09815999463433 0.33723441399733606 1.0 ['ENST00000567039.1_1_15:43620629-43622752:-|nuORF', 'ENST00000305641.6_1_15:43622500-43622752:-|nuORF'] 67048 603 LTARRLLPLRL True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 3.1502 3 -1.098188694245196 0.33723441399733606 1.0 ['ENSG00000103150|ENST00000262430|MLYCD'] 128084 9710 VRRLVKILLLG True NCI_RA007_Epitope_Rep5 1278.8863611770998 1278.8847149037902 43.983 3 -1.098232267893259 0.33723441399733606 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 13036 12674 DLQTQLSHEI True H1975_Epitope_Rep3 1182.5880664685799 1182.58696993586 53.96 2 -1.0982529260159266 0.33723441399733606 1.0 ['ENSG00000102978|ENST00000219252|POLR2C'] 122125 9988 VGRGRRMPGNR True PC9_epitope_Rep1 1254.6839900557798 1254.6828899358602 43.283 2 -1.0983458836713633 0.3372859876894429 1.0 ['ENST00000450834.2_1_10:31597037-31607903:-|nuORF', 'ENST00000441257.1_1_10:31607356-31607903:-|nuORF', 'ENST00000607455.1_1_10:31607508-31607900:-|nuORF', 'ENST00000606250.1_1_10:31607570-31607903:-|nuORF'] 55339 15767 LASEIFRRHFR True H1975_Epitope_Rep1 1430.78950067014 1430.78840993586 65.953 2 -1.0983695287582047 0.3372859876894429 1.0 ['ZSCAN9|p.R48S|1|0.24|ENSG00000137185|chr6:28227228-28227228|G/T|missense_variant'] 44812 21492 IPVFIAMIQ True PC9_epitope_Rep6 1030.5885244929 1030.5874299358602 95.542 2 -1.0983944601286026 0.3372859876894429 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'ENST00000484937.5_1_1:62582831-62626723:+|nuORF', 'ENST00000472512.2_1_1:62586792-62593784:+|nuORF'] 101270 11385 SLWQQAAELP True H1975_Epitope_Rep3 1141.57677350889 1141.57566993586 48.906 2 -1.0984431456678143 0.33729455730412633 1.0 ['ENST00000345617.7_1_2:239974412-239974691:-|nuORF'] 33491 11617 GLGSRFGVP True PC9_epitope_Rep1 888.4817509252399 888.48064993586 49.563 2 -1.0985647294531973 0.3373504881360315 1.0 ['ENST00000292539.8_1_8:145722273-145722696:+|nuORF', 'ENST00000526183.5_1_8:145722273-145723094:+|nuORF'] 19280 8678 ELLREKVNL True NCI_RA007_Epitope_Rep3 1112.65535818276 1112.6542699358602 41.215 2 -1.09856622532586 0.3373504881360315 1.0 ['nc|ENSG00000061337|Q9Y250-2|LZTS1', 'ENSG00000061337|ENST00000381569|LZTS1', 'nc|ENSG00000061337|Q9Y250-3|LZTS1'] 12918 12502 DLNEALTQPV True PC9_epitope_Rep2 1098.55570371114 1098.55460993586 53.398 2 -1.0986793025955028 0.337363262561742 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 130079 18066 VTQLIPRGTDP True PC9_epitope_Rep1 1195.65608645875 1195.6549899358602 74.283 2 -1.0986889004546496 0.337363262561742 1.0 ['RC3H1|p.P1010Tfs*14|1|0.12|ENSG00000135870|chr1:173943550-173943551|-/G|frameshift_variant', 'nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 110219 11820 TIEELSAQI True PC9_epitope_Rep3 1002.5233409537 1002.52224993586 50.483 2 -1.0986918848351055 0.337363262561742 1.0 ['ENST00000427733.1_1_13:90882929-90883235:+|nuORF'] 26331 15527 FIFHSHRTP True H1975_Epitope_Rep2 1140.58286194884 1140.5817699358602 64.879 2 -1.0987311765627255 0.33737183051241937 1.0 ['ENSG00000215474|ENST00000425639|SKOR2', 'nc|ENSG00000215474|Q2VWA4-2|SKOR2', 'nc|ENSG00000188779|P84550-3|SKOR1', 'ENSG00000188779|ENST00000380035|SKOR1', 'nc|ENSG00000188779|P84550-2|SKOR1'] 10127 16144 CACSIWSGNLW True PC9_epitope_Rep4 1238.5212498620601 1238.5201499358602 70.037 2 -1.0988895456773273 0.3374191880010344 1.0 ['chr2:227536704-227551959|108|20.58|0.5|5.36|+|1|AGFG1,AGFG1|1'] 111801 9263 TLREGGWP True PC9_epitope_Rep2 914.4610154806599 914.45990993586 40.967 2 -1.098900816556326 0.3374233922060459 1.0 ['ENST00000401813.7_1_1:2130482-2130731:-|nuORF'] 9254 23584 AVQRRRQRRPH True PC9_epitope_Rep3 1458.85047821726 1458.84938993586 96.0 2 -1.0989347419927025 0.3374233922060459 1.0 ['ENSG00000243708|ENST00000458483|PLA2G4B', 'nc|ENSG00000243708|P0C869-8|PLA2G4B', 'nc|ENSG00000243708|P0C869-6|PLA2G4B', 'nc|ENSG00000243708|P0C869-4|PLA2G4B'] 64721 10730 LRPGDPVSL True PC9_epitope_Rep5 952.5341804209199 952.53308993586 46.265 2 -1.0989648468928823 0.3374707471910839 1.0 ['ENST00000588912.1_1_19:10400815-10401250:+|nuORF'] 29926 9024 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 41.368 3 -1.0990894785040892 0.33749224244931736 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 115845 18461 TVNEKQKLSVP True PC9_epitope_Rep5 1241.6979512707298 1241.6968499358602 76.031 2 -1.0991418141927238 0.33749644454787575 1.0 ['ATRX|p.K686N|2|0.27|ENSG00000085224|chrX:77683198-77683198|C/A|missense_variant'] 133152 9525 WDASFGDQRNI True PC9_epitope_Rep5 1307.5894634509098 1307.58836993586 41.597 2 -1.0992058444842092 0.33749644454787575 1.0 ['ENST00000537045.5_1_22:19024355-19024484:-|nuORF'] 116769 10401 TYLEPGIG True H1975_Epitope_Rep1 848.4279840168799 848.42743496793 44.957 1 -1.09927406901884 0.3375179386401541 1.0 ['nc|ENSG00000198728|Q86U70-3|LDB1', 'nc|ENSG00000198728|Q86U70-2|LDB1', 'ENSG00000198728|ENST00000673968|LDB1'] 111986 9546 TLSNERIP True PC9_epitope_Rep1 928.4977949121999 928.49668993586 41.576 2 -1.099441082094618 0.3375782179241868 1.0 ['ENST00000332047.9_1_3:134204707-134214160:+|nuORF'] 137749 14365 YNLTIDNF True NCI_RA007_Epitope_Rep4 998.4709114580199 998.46980993586 62.562 2 -1.0994590486199254 0.3375867819881317 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant', 'nc|ENSG00000042781|O75445-2|USH2A', 'USH2A|p.P1652Rfs*13|1|0.38|ENSG00000042781|chr1:216086751-216086751|G/-|frameshift_variant'] 110776 20308 TKLRALKCRQ True PC9_epitope_Rep6 1215.72339525627 1215.72175490379 90.822 3 -1.0995214015664776 0.3376039094517201 1.0 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462'] 123598 9929 VIKKGRFIKI True NCI_RA007_Epitope_Rep2 1200.8070482272399 1200.80539490379 43.247 3 -1.099524458388579 0.3376039094517201 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9'] 95562 15126 SASGFADF True PC9_epitope_Rep4 800.3340836320399 800.33298993586 66.109 2 -1.099604784865152 0.33764252656617627 1.0 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1'] 13837 8101 DQYLAIFRP True H1975_Epitope_Rep2 1121.58694426977 1121.58584993586 36.109 2 -1.0996225385047074 0.33764252656617627 1.0 ['OR11H12|p.C142F|1|0.08|ENSG00000257115|chr14:18601541-18601541|G/T|missense_variant'] 807 23875 ADAARTREFL True H1975_Epitope_Rep1 1148.59382055536 1148.59272993586 99.097 2 -1.0996509268913062 0.33764252656617627 1.0 ['ENSG00000148841|ENST00000337478|ITPRIP'] 92968 13327 RRQEWERQYRK True H1975_Epitope_Rep3 1633.8549544610098 1633.8538499358601 56.522 2 -1.0998198775202528 0.33770699484209576 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 46470 13889 ITNLKRRYSFR True H1975_Epitope_Rep3 1452.8313654821197 1452.83026993586 58.733 2 -1.0998215566185665 0.33770699484209576 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 45948 12706 ISSKENKDL True PC9_epitope_Rep4 1032.54513902744 1032.5440499358601 56.729 2 -1.0998614207146193 0.33770699484209576 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 36235 6876 GVGEHADVPGP True H1975_Epitope_Rep3 1033.4828731240498 1033.48176993586 31.407 2 -1.0999059701900162 0.33771555624499083 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 45473 16809 ISEKKYRQP True PC9_epitope_Rep1 1147.6349570913499 1147.63386993586 69.481 2 -1.0999912341980222 0.33773250778796066 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant'] 77966 14061 PALEPVSRP True PC9_epitope_Rep5 964.5341804209199 964.53308993586 59.099 2 -1.0999973001798433 0.33773250778796066 1.0 ['ENSG00000125895|ENST00000429036|TMEM74B'] 18730 24530 ELDLEIEKCEA True H1975_Epitope_Rep1 1290.6013335742202 1290.5996849037901 101.66 3 -1.1000012859778499 0.33773250778796066 1.0 ['ENSG00000198774|ENST00000361228|RASSF9'] 125299 19967 VLRSWWPRWWW True H1975_Epitope_Rep3 1656.8466216234397 1656.8455299358602 83.563 2 -1.100023028996975 0.33773250778796066 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 92909 19532 RRPGPGGK True PC9_epitope_Rep6 823.4776686043099 823.47656993586 87.794 2 -1.1000360011060881 0.33773250778796066 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A'] 111304 13589 TLHPAPSPSL True PC9_epitope_Rep5 1018.54474510462 1018.54364993586 57.292 2 -1.1001519734321132 0.33774106819709426 1.0 ['TNS4-CCR7|1|fusion', 'ENSG00000131746|ENST00000254051|TNS4'] 63410 9743 LPGIHVSA True PC9_epitope_Rep4 792.4493881678 792.44828993586 45.113 2 -1.1001901027590504 0.33776674809673374 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 76829 9428 NVGAGSYL True PC9_epitope_Rep6 779.3813681776301 779.3808149679301 46.49 1 -1.1002001158577492 0.33776674809673374 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1', 'nc|ENSG00000138688|Q2LD37-2|BLTP1', 'nc|ENSG00000138688|Q2LD37-5|BLTP1', 'ENST00000495260.5_1_4:123117925-123131067:+|nuORF'] 98889 12623 SIWDIRILP True PC9_epitope_Rep1 1111.63897984263 1111.6378899358601 53.424 2 -1.1002104072419225 0.33776674809673374 1.0 ['ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENST00000472061.1_1_7:99754715-99755074:-|nuORF'] 125484 6433 VLVFTQFWF True PC9_epitope_Rep6 1185.62226714933 1185.62062490379 33.371 3 -1.1002286689122807 0.3377753076207217 1.0 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 23414 11878 EVVLPLLKG True H1975_Epitope_Rep1 966.6113681124599 966.61026993586 50.688 2 -1.1002716523927938 0.3377838669234448 1.0 ['ENST00000466602.1_1_2:219677084-219677513:+|nuORF'] 122034 16253 VGQPGIGF True PC9_epitope_Rep3 773.40718900265 773.40608993586 67.655 2 -1.1003299321579008 0.3378053509112059 1.0 ['ENSG00000187498|ENST00000375820|COL4A1', 'COL4A1|p.G1073Vfs*124|1|0.14|ENSG00000187498|chr13:110174730-110174730|C/-|frameshift_variant'] 63044 11709 LNKHLTTHQ True PC9_epitope_Rep4 1090.5883412521002 1090.5872499358602 52.801 2 -1.1004071279265013 0.3378088493745477 1.0 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A'] 131438 17876 VVTSSIRR True NCI_RA007_Epitope_Rep4 916.54541381096 916.54430993586 77.385 2 -1.100408739238649 0.3378088493745477 1.0 ['nc|ENSG00000143147|Q8N6U8-2|GPR161', 'ENST00000493800.1_1_1:168059784-168074118:-|nuORF', 'ENSG00000143147|ENST00000682931|GPR161', 'nc|ENSG00000143147|Q8N6U8-6|GPR161'] 99820 18147 SLGTGCPV True NCI_RA007_Epitope_Rep2 732.3476255212 732.3470749679301 75.347 1 -1.100418942216563 0.3378088493745477 1.0 ['nc|ENSG00000285231|A0A2R8YFM6|OOSP3'] 125213 15647 VLQPKVEF True NCI_RA007_Epitope_Rep4 958.5487678558999 958.54766993586 67.963 2 -1.1004496979776661 0.3378088493745477 1.0 ['ENSG00000147041|ENST00000297875|SYTL5', 'nc|ENSG00000147041|Q8TDW5-2|SYTL5'] 97378 5840 SGCACGCGCE True NCI_RA007_Epitope_Rep4 888.2234302612 888.22232993586 29.088 2 -1.100493756197439 0.3378088493745477 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 98218 10018 SIEDLLEASMP True H1975_Epitope_Rep1 1203.56930516995 1203.56820993586 43.471 2 -1.100498371131692 0.3378088493745477 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 88723 8269 RCWTWPWREW True NCI_RA007_Epitope_Rep1 1504.6822587202796 1504.6806149037902 36.164 3 -1.1004986999948951 0.3378088493745477 1.0 ['ENST00000374279.3_1_9:114659094-114659565:+|nuORF'] 22476 4075 ETHIRVPA True PC9_epitope_Rep4 921.50321464581 921.50210993586 21.954 2 -1.1004999539376845 0.3378088493745477 1.0 ['ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 78588 7351 PDSATDSQLQ True NCI_RA007_Epitope_Rep2 1060.46728262956 1060.46618993586 33.216 2 -1.100524528772544 0.3378088493745477 1.0 ['nc|ENSG00000101187|Q96BD0-4|SLCO4A1', 'ENSG00000101187|ENST00000217159|SLCO4A1', 'ENST00000497209.5_1_20:61299742-61303242:+|nuORF'] 115389 20711 TVERLLEPL True PC9_epitope_Rep5 1068.6179100448799 1068.6168099358601 84.723 2 -1.1005757899400763 0.3378088493745477 1.0 ['nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'CTNNA2|p.D319Tfs*32|1|0.27|ENSG00000066032|chr2:79909694-79909694|C/-|frameshift_variant', 'CTNNA2|p.N165Kfs*5|1|0.15|ENSG00000066032|chr2:79869839-79869840|-/A|frameshift_variant'] 48077 4022 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 20.294 3 -1.100599596282765 0.3378088493745477 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 63411 11131 LPGIHVSA True PC9_epitope_Rep5 792.4493881678 792.44828993586 47.8 2 -1.1006032081486996 0.3378088493745477 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 83156 8779 PYSIMRSV True PC9_epitope_Rep1 951.48478770035 951.48368993586 38.609 2 -1.1006124837396731 0.3378088493745477 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 67047 528 LTARRLLPLRL True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 2.7729 3 -1.1006361074106306 0.3378088493745477 1.0 ['ENSG00000103150|ENST00000262430|MLYCD'] 124524 3151 VLFYTPWCRF True NCI_RA007_Epitope_Rep2 1330.65325000778 1330.65160490379 16.894 3 -1.1006864228410493 0.3378174064741229 1.0 ['ENSG00000113621|ENST00000358387|TXNDC15', 'nc|ENSG00000113621|Q96J42-2|TXNDC15', 'ENST00000506350.1_1_5:134223848-134231723:+|nuORF'] 52908 20906 KRHPPQRLQKL True NCI_RA007_Epitope_Rep2 1399.8524352798697 1399.8513299358601 86.473 2 -1.1007814251793513 0.33785180782053603 1.0 ['CCDC198|p.R125Kfs*22|2|0.39|ENSG00000100557|chr14:57483084-57483085|-/T|frameshift_variant', 'ENSG00000100557|ENST00000216445|CCDC198'] 56917 11109 LEDRKYLP True PC9_epitope_Rep6 1032.56039516876 1032.55928993586 53.666 2 -1.1008295070123923 0.33788620827787613 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000479983.1_1_1:62958359-62960107:-|nuORF'] 43178 7068 IGSLDVEKV True H1975_Epitope_Rep2 958.53351171458 958.53240993586 32.116 2 -1.1009486090582308 0.3379076859461415 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant', 'NEB|p.P1384Lfs*36|2|0.33|ENSG00000183091|chr2:151672517-151672517|G/-|frameshift_variant'] 79240 16054 PGGHGRCS True NCI_RA007_Epitope_Rep5 769.32895576529 769.32784993586 68.482 2 -1.1011044567042942 0.3380196151907894 1.0 ['ENST00000358187.2_1_10:106075300-106075366:-|nuORF'] 119281 9297 VELKDIIRQK True NCI_RA007_Epitope_Rep1 1240.7503211967598 1240.74868490379 40.159 3 -1.1011571436286762 0.33804109058017834 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant', 'ENST00000472829.1_1_3:121448028-121448843:-|nuORF'] 87771 12969 QVGRQLAI True PC9_epitope_Rep4 883.5239500903898 883.52284993586 57.778 2 -1.1012057570951432 0.3380494611985425 1.0 ['ENSG00000030110|ENST00000374467|BAK1', 'nc|ENSG00000030110|Q16611-2|BAK1'] 98563 19969 SILWLWLWL True NCI_RA007_Epitope_Rep2 1228.7008518231999 1228.70027496793 82.675 1 -1.101213345270494 0.3380494611985425 1.0 ['ENST00000491383.5_1_2:86716620-86718467:+|nuORF'] 3128 24279 AGDHSYCLLC True H1975_Epitope_Rep3 1080.4368515317599 1080.43574993586 101.13 2 -1.1012236674755145 0.3380494611985425 1.0 ['ENST00000222345.10_1_19:38571927-38572134:+|nuORF'] 66564 8313 LSSLATAKSI True NCI_RA007_Epitope_Rep2 989.57571087973 989.5746099358599 36.974 2 -1.1012253721198204 0.3380494611985425 1.0 ['ENSG00000177602|ENST00000325418|HASPIN'] 21960 26834 ESLLHLLIRR True PC9_epitope_Rep5 1248.76663996724 1248.76554993586 109.58 2 -1.101297707086501 0.33805783095170416 1.0 ['ENSG00000182261|ENST00000691676|NLRP10'] 34679 17415 GQLGSWTLI True H1975_Epitope_Rep2 973.5232813840499 973.52218993586 72.279 2 -1.1013082011155488 0.33805783095170416 1.0 ['ENST00000338660.5_1_1:1375524-1375638:+|nuORF'] 56560 18237 LDVQRYPLY True PC9_epitope_Rep1 1165.6131590176099 1165.61206993586 74.94 2 -1.1013231954573643 0.33805783095170416 1.0 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 2984 20821 AFLRAGVRYQ True PC9_epitope_Rep3 1179.6512758618298 1179.65016993586 85.359 2 -1.1013414187160366 0.33805783095170416 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 64909 9803 LSAYRLHRETH True NCI_RA007_Epitope_Rep2 1381.72148067997 1381.72038993586 42.756 2 -1.1013882258994385 0.3380793033501725 1.0 ['ENSG00000185219|ENST00000396077|ZNF445'] 101436 2792 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 15.173 2 -1.1014263707411556 0.33808348729344584 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 100796 12427 SLRRWPPL True PC9_epitope_Rep5 1023.5977837369899 1023.5966899358599 52.799 2 -1.1014619651452469 0.33808348729344584 1.0 ['ENSG00000162571|ENST00000379289|TTLL10', 'nc|ENSG00000162571|Q6ZVT0-2|TTLL10'] 37327 6750 GVVTPKEL True PC9_epitope_Rep1 841.4909186266099 841.48982993586 30.769 2 -1.1014914474756483 0.3380876710205031 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-5|USP16', 'ENST00000474835.5_1_21:30400234-30414894:+|nuORF'] 71893 13061 MPPEAVSARVP True NCI_RA007_Epitope_Rep1 1152.59612905448 1152.59502993586 54.796 2 -1.101496394915718 0.3380876710205031 1.0 ['ENST00000522491.1_1_5:149900611-149900977:+|nuORF'] 127979 22879 VRPRPGTG True PC9_epitope_Rep3 838.47733425114 838.47622993586 93.27 2 -1.1015044702321781 0.3380916701116164 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000505521.1_1_5:177019227-177019656:+|nuORF'] 61648 5144 LLHGFGGG True NCI_RA007_Epitope_Rep3 756.39187329168 756.39076993586 27.227 2 -1.1015217475484915 0.3380916701116164 1.0 ['ENSG00000011198|ENST00000644371|ABHD5'] 127996 19325 VRQLMHKLLVF True NCI_RA007_Epitope_Rep3 1382.82204666838 1382.8204049037902 84.368 3 -1.1015443257423847 0.3380916701116164 1.0 ['ENST00000482853.5_1_6:41001618-41002768:-|nuORF', 'ENSG00000124602|ENST00000244565|UNC5CL'] 127609 22569 VRAGAGGVGLG True PC9_epitope_Rep2 912.5141136826799 912.5130099358599 92.305 2 -1.1016216486667259 0.3380916701116164 1.0 ['ENST00000496700.5_1_14:105953068-105953266:+|nuORF'] 4239 7834 AIGGSKPK True PC9_epitope_Rep1 756.4493881678 756.44828993586 34.96 2 -1.1016461145574967 0.3380916701116164 1.0 ['nc|ENSG00000135903|P23760|PAX3', 'nc|ENSG00000135903|P23760-6|PAX3', 'ENSG00000135903|ENST00000392070|PAX3', 'nc|ENSG00000135903|P23760-8|PAX3', 'nc|ENSG00000135903|P23760-3|PAX3', 'nc|ENSG00000135903|P23760-2|PAX3', 'nc|ENSG00000135903|P23760-4|PAX3', 'PAX3|p.P376Vfs*3|1|0.41|ENSG00000135903|chr2:222220177-222220187|GGGTTGGAGGG/CCAC|frameshift_variant', 'nc|ENSG00000135903|P23760-5|PAX3'] 46279 14021 ITEAQRTSL True PC9_epitope_Rep1 1017.5454733806099 1017.54436993586 58.771 2 -1.101705575973171 0.338100220904546 1.0 ['ENST00000520810.5_1_8:42188602-42189049:+|nuORF'] 118681 18851 VEARRWLRQAR True NCI_RA007_Epitope_Rep1 1439.82219778075 1439.82110993586 77.471 2 -1.1017137398485024 0.33810440376690654 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 5037 5596 ALLGAEQSLTP True H1975_Epitope_Rep3 1098.59208921986 1098.59098993586 26.565 2 -1.101723460270224 0.33810440376690654 1.0 ['ENST00000378567.7_1_1:2116514-2116796:+|nuORF'] 44595 5758 IPGTETYKEGT True PC9_epitope_Rep1 1194.5768330785397 1194.57517490379 26.965 3 -1.1017470148431714 0.338125871957836 1.0 ['ENST00000565929.1_1_16:67583207-67583465:-|nuORF'] 58615 17004 LFFKDRYFWRR True NCI_RA007_Epitope_Rep3 1632.8677509908398 1632.86664993586 74.745 2 -1.1017816459867462 0.338147339594125 1.0 ['ENST00000528662.6_1_11:102584081-102593757:-|nuORF', 'ENSG00000118113|ENST00000236826|MMP8', 'ENSG00000166670|ENST00000279441|MMP10'] 121454 22045 VGILSGLGALP True PC9_epitope_Rep3 995.6015317047498 995.60042993586 90.093 2 -1.1018100104667734 0.3381688066757951 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 21921 7809 ESGQPVVP True PC9_epitope_Rep3 811.4075829254699 811.40648993586 35.029 2 -1.101942906604172 0.33825486016921785 1.0 ['ENSG00000133393|ENST00000255759|CEP20'] 109454 8801 TGSTPAYGYWF True NCI_RA007_Epitope_Rep4 1248.54513902744 1248.54349490379 40.664 3 -1.1020626944114327 0.3382892425338431 1.0 ['nc|ENSG00000142512|Q96LC7-5|SIGLEC10', 'ENST00000524527.1_1_19:51920201-51920835:-|nuORF', 'nc|ENSG00000142512|Q96LC7-8|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-9|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-6|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-7|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-2|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-4|SIGLEC10', 'nc|ENSG00000142512|Q96LC7-3|SIGLEC10', 'ENSG00000142512|ENST00000339313|SIGLEC10'] 80983 23607 PNLALVLLGAL True PC9_epitope_Rep2 1092.69068106232 1092.68958993586 96.275 2 -1.1020786621067857 0.3382977898911092 1.0 ['nc|ENSG00000184224|Q8NBR9|NDUFV1-DT'] 131381 6375 VVSQPPDT True PC9_epitope_Rep1 841.41814760917 841.4175949679301 29.33 1 -1.102180473582691 0.33835363412082303 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 83478 8016 QDGESLQMFQA True H1975_Epitope_Rep1 1252.5394020239999 1252.53830993586 35.777 2 -1.1022383023447586 0.33835363412082303 1.0 ['nc|ENSG00000164828|O94901-5|SUN1', 'ENSG00000164828|ENST00000401592|SUN1', 'nc|ENSG00000164828|O94901-9|SUN1', 'ENST00000475971.5_1_7:893033-912965:+|nuORF', 'ENST00000413171.6_1_7:892397-912965:+|nuORF', 'nc|ENSG00000164828|O94901-6|SUN1'] 134166 24899 WRKVLLKG True NCI_RA007_Epitope_Rep1 998.6389202729798 998.6378299358599 103.06 2 -1.102316549424851 0.3383880134332214 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 111909 18054 TLRRYKRHYKL True NCI_RA007_Epitope_Rep1 1532.90519912872 1532.90410993586 74.365 2 -1.1023453963790728 0.3383965590731197 1.0 ['nc|ENSG00000164576|Q9HAJ7-2|SAP30L', 'nc|ENSG00000164576|Q9HAJ7-3|SAP30L', 'ENSG00000164576|ENST00000297109|SAP30L', 'ENST00000520731.1_1_5:153832004-153835585:+|nuORF'] 75085 1798 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 9.8783 3 -1.1024411186179615 0.3384051044922632 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 102064 20023 SPPPRVPPSL True PC9_epitope_Rep1 1045.59202965021 1045.59092993586 81.845 2 -1.10251888602288 0.33843073942525026 1.0 ['ENST00000392069.6_1_2:223163333-223163570:-|nuORF'] 85552 22842 QLLELVEL True PC9_epitope_Rep4 955.5589981864299 955.55790993586 96.085 2 -1.102532338986989 0.33843073942525026 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 60869 9751 LKPEPTKTF True PC9_epitope_Rep5 1059.5964463243101 1059.5953499358602 42.477 2 -1.1025331408526724 0.33843073942525026 1.0 ['nc|ENSG00000240021|Q5T0J7-3|TEX35', 'nc|ENSG00000240021|Q5T0J7-5|TEX35', 'nc|ENSG00000240021|Q5T0J7-2|TEX35', 'TEX35|p.P224Afs*8|2|0.21|ENSG00000240021|chr1:178522405-178522406|-/T|frameshift_variant', 'ENSG00000240021|ENST00000319416|TEX35'] 66507 11003 LSSCIHKIEEV True H1975_Epitope_Rep3 1256.64347316972 1256.6423699358602 47.412 2 -1.1026172195810393 0.33847803063570375 1.0 ['ENSG00000198920|ENST00000361413|KIAA0753'] 15941 6893 EDSTWERRQD True H1975_Epitope_Rep1 1320.5694562823198 1320.5683499358602 31.554 2 -1.1026392990954486 0.33848657445077296 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7', 'CHD7|p.R1548Gfs*11|1|0.18|ENSG00000171316|chr8:60841749-60841749|G/-|frameshift_variant'] 43508 19837 IICARKIV True PC9_epitope_Rep1 914.5735431351 914.57244993586 81.119 2 -1.1026692666616833 0.33849511804515164 1.0 ['LYZL1|p.G190Rfs*3|1|0.25|ENSG00000120563|chr10:29311035-29311036|-/A|frameshift_variant', 'ENSG00000120563|ENST00000649382|LYZL1', 'nc|ENSG00000120563|Q6UWQ5-2|LYZL1'] 122043 5878 VGQRLPAP True PC9_epitope_Rep2 836.4868363056798 836.48572993586 28.004 2 -1.1027289243306326 0.33850366141884825 1.0 ['ENST00000240285.9_1_8:74206860-74207115:+|nuORF'] 19241 8338 ELLDLHRDSER True H1975_Epitope_Rep1 1381.6949911486101 1381.6938899358602 37.003 2 -1.102755994249835 0.3385336622283065 1.0 ['ENSG00000117228|ENST00000370473|GBP1', 'ENSG00000162645|ENST00000370466|GBP2'] 36939 13555 GVREVFEMATR True PC9_epitope_Rep3 1293.6499555324897 1293.64831490379 57.194 3 -1.1027570363664878 0.3385336622283065 1.0 ['ENST00000473074.1_1_1:113244164-113245337:-|nuORF', 'ENSG00000155366|ENST00000339083|RHOC', 'ENSG00000067560|ENST00000418115|RHOA'] 12300 16058 DISTQDWHK True H1975_Epitope_Rep3 1128.5199869087598 1128.5188899358602 67.224 2 -1.102846539317849 0.3385809484450873 1.0 ['chr12:48492995-48494801|179|10.17|0.33|4.95|+|0|C12orf54,None|1'] 25375 18058 FEIGELRASL True PC9_epitope_Rep6 1133.60807363717 1133.6069699358602 82.09 2 -1.1029315018184898 0.3386496887672082 1.0 ['ENST00000513868.6_1_8:129001487-129082505:+|nuORF'] 94374 13040 RYDEGTLFS True H1975_Epitope_Rep3 1086.4981888350198 1086.49767496793 55.398 1 -1.1029354338891226 0.3386496887672082 1.0 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS', 'nc|ENSG00000163618|Q9ULU8-2|CADPS', 'nc|ENSG00000163618|Q9ULU8-3|CADPS'] 60449 8012 LILFGVGT True PC9_epitope_Rep1 818.49019035062 818.48908993586 35.638 2 -1.1031091679254081 0.3387355045326584 1.0 ['ENST00000296657.6_1_5:10653441-10653774:+|nuORF'] 26177 19352 FHRRLPALR True NCI_RA007_Epitope_Rep5 1164.6992291137597 1164.69757490379 81.315 3 -1.1031115826389226 0.3387355045326584 1.0 ['ENST00000472912.5_1_10:75633263-75634202:-|nuORF'] 109271 6230 TGAYHTRKAK True NCI_RA007_Epitope_Rep3 1131.61489035311 1131.61378993586 31.509 2 -1.1031130429298712 0.3387355045326584 1.0 ['ENST00000368655.4_1_1:153782348-153782624:-|nuORF'] 8937 7771 AVGPERRLLA True PC9_epitope_Rep4 1080.64037682496 1080.63926993586 37.288 2 -1.1031854402531673 0.3387355045326584 1.0 ['ENSG00000166183|ENST00000551177|ASPG', 'nc|ENSG00000166183|Q86U10-3|ASPG'] 48231 10502 KDASLQPPERL True NCI_RA007_Epitope_Rep2 1252.6775501793197 1252.67644993586 45.445 2 -1.103258278622134 0.3387569570888054 1.0 ['ENSG00000156860|ENST00000356166|FBRS', 'ENST00000498588.1_1_16:30671247-30671787:+|nuORF', 'ENST00000484152.1_1_16:30671247-30673851:+|nuORF'] 12826 6153 DLKKYHFYYWF True NCI_RA007_Epitope_Rep1 1608.7765359446 1608.77488490379 27.971 3 -1.1032613902804154 0.338761121369817 1.0 ['ENSG00000197548|ENST00000693202|ATG7', 'nc|ENSG00000197548|O95352-2|ATG7'] 118533 16768 VDVCCPGP True H1975_Epitope_Rep2 788.3196965211998 788.31858993586 69.735 2 -1.1032977635732997 0.338761121369817 1.0 ['ENST00000322954.10_1_15:71055780-71055930:-|nuORF'] 115481 19616 TVFWKVLF True PC9_epitope_Rep1 1038.5902387450597 1038.5891499358602 80.28 2 -1.1033419661279555 0.3387696598744867 1.0 ['nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1', 'nc|ENSG00000183023|P32418-2|SLC8A1', 'nc|ENSG00000183023|P32418-3|SLC8A1', 'nc|ENSG00000183023|P32418-4|SLC8A1', 'ENSG00000118160|ENST00000236877|SLC8A2'] 104339 18324 SSETTSIKREP True PC9_epitope_Rep4 1233.62009487285 1233.61843490379 78.552 3 -1.1033933861787546 0.33879527406546583 1.0 ['MUC16|p.N5179S|1|0.24|ENSG00000181143|chr19:8961234-8961234|T/C|missense_variant'] 13827 7556 DQVVVDNVFPN True NCI_RA007_Epitope_Rep2 1244.6037165327198 1244.60260993586 34.016 2 -1.1034378801206395 0.33879527406546583 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 81539 18426 PQYRSSKFR True PC9_epitope_Rep5 1167.61489035311 1167.61324490379 75.896 3 -1.10344139909249 0.33879527406546583 1.0 ['ENSG00000106789|ENST00000375077|CORO2A', 'nc|ENSG00000103647|Q9UQ03-2|CORO2B', 'ENSG00000103647|ENST00000261861|CORO2B'] 23434 19055 EVVWGPDSHL True PC9_epitope_Rep4 1137.5454733806098 1137.54436993586 81.385 2 -1.1035747196903394 0.33882963613356404 1.0 ['ENSG00000184956|ENST00000421673|MUC6', 'MUC6|p.P1362Hfs*94|1|0.21|ENSG00000184956|chr11:1018716-1018716|G/-|frameshift_variant'] 122349 10740 VGSARALR True NCI_RA007_Epitope_Rep4 828.49298431528 828.49188993586 48.157 2 -1.1035957569408728 0.3388335851054215 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 17657 7030 EHRGPVQVT True PC9_epitope_Rep5 1021.53049202281 1021.52938993586 32.01 2 -1.1035966652019205 0.3388335851054215 1.0 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'chr19:38596001-38596078|190|16.73|0.04|8.81|-|2|MAP4K1,None|3', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF'] 123751 14580 VIRLTSADAL True PC9_epitope_Rep1 1057.6131590176099 1057.61206993586 60.905 2 -1.103615326834041 0.3388335851054215 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 63413 9177 LPGIHVSA True PC9_epitope_Rep6 792.4493881678 792.44828993586 45.428 2 -1.1036308931412553 0.3388335851054215 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 27588 13719 FPRRIFLEWRT True H1975_Epitope_Rep1 1519.8412018898296 1519.84010993586 57.91 2 -1.1036365673771371 0.3388335851054215 1.0 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 84954 12244 QIAPQLWKMSI True NCI_RA007_Epitope_Rep2 1313.71657854033 1313.7154899358602 52.227 2 -1.1036424353975194 0.3388377467625528 1.0 ['ENST00000550125.5_1_12:49399131-49412528:-|nuORF'] 90016 19405 RGEDAGKQVP True H1975_Epitope_Rep2 1055.53597132607 1055.5348699358601 80.54 2 -1.1036680457955677 0.3388377467625528 1.0 ['ENST00000487560.1_1_2:70417790-70417934:-|nuORF'] 115644 7803 TVKARPSVL True NCI_RA007_Epitope_Rep4 969.5971150306499 969.59600993586 36.699 2 -1.1037024169548866 0.3388546050762994 1.0 ['ENSG00000135372|ENST00000257829|NAT10'] 15614 4152 EAVHDLLRPR True NCI_RA007_Epitope_Rep5 1204.66765420196 1204.66600490379 22.481 3 -1.1037259934185126 0.3388546050762994 1.0 ['nc|ENSG00000188677|Q9HBI1-3|PARVB', 'ENSG00000188677|ENST00000338758|PARVB', 'nc|ENSG00000188677|Q9HBI1-2|PARVB'] 26485 13513 FIQSSQQYQV True PC9_epitope_Rep3 1226.5931518490202 1226.59150490379 57.027 3 -1.1037387889553198 0.3388546050762994 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'ENST00000473037.5_1_1:235826242-235897989:-|nuORF'] 98571 12258 SIMIHWQPPAP True PC9_epitope_Rep1 1275.64341360007 1275.64230993586 52.01 2 -1.1037474919989376 0.3388546050762994 1.0 ['nc|ENSG00000067141|Q92859-4|NEO1', 'ENSG00000067141|ENST00000261908|NEO1', 'nc|ENSG00000067141|Q92859-3|NEO1', 'nc|ENSG00000067141|Q92859-2|NEO1', 'NEO1|p.D1259Ifs*101|1|0.33|ENSG00000067141|chr15:73293422-73293422|G/-|frameshift_variant'] 19907 4646 ELWTWMEDLQK True NCI_RA007_Epitope_Rep2 1477.69115163813 1477.68949490379 22.698 3 -1.1037695563506968 0.3388546050762994 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'KALRN|p.R813Afs*7|1|0.24|ENSG00000160145|chr3:124413566-124413566|C/-|frameshift_variant', 'nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN'] 37052 13371 GVSEERIHL True PC9_epitope_Rep5 1038.5458077337798 1038.54470993586 56.448 2 -1.1037906376638418 0.33886292633807547 1.0 ['nc|ENSG00000149636|Q9H410-4|DSN1', 'ENSG00000149636|ENST00000373750|DSN1'] 46323 6670 ITFFRMKVQ True H1975_Epitope_Rep3 1168.6426853240798 1168.64158993586 30.61 2 -1.1038273402941747 0.33886292633807547 1.0 ['ENSG00000198722|ENST00000635942|UNC13B', 'UBAP1-UNC13B|1|fusion', 'nc|ENSG00000198722|O14795|UNC13B', 'nc|ENSG00000198722|O14795-2|UNC13B', 'ENSG00000130477|ENST00000519716|UNC13A'] 75094 743 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 4.1164 3 -1.1038351637400492 0.33886292633807547 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 20114 12242 ENKLFKDD True NCI_RA007_Epitope_Rep3 1007.4923751785899 1007.49126993586 55.302 2 -1.103838845719143 0.33886292633807547 1.0 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant'] 36508 9112 GVKGAKIK True PC9_epitope_Rep5 799.5279728416699 799.52686993586 39.995 2 -1.103860826200267 0.33887146121374073 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 47798 22628 IYQVRLKMI True PC9_epitope_Rep4 1162.6896355164997 1162.68852993586 95.267 2 -1.1038800147387116 0.33887562124830567 1.0 ['ENST00000526129.5_1_1:76198579-76227103:+|nuORF'] 82658 22910 PVLRCRQFT True PC9_epitope_Rep5 1118.60188314126 1118.6007899358601 93.116 2 -1.1038816560103983 0.33887562124830567 1.0 ['ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENST00000472061.1_1_7:99754715-99755074:-|nuORF'] 32265 16950 GFPTPLGS True H1975_Epitope_Rep1 774.39120458534 774.39065496793 70.618 1 -1.103919482100807 0.33888831517529816 1.0 ['ENST00000382361.7_1_7:5645159-5645399:+|nuORF'] 52433 17105 KPGRHSVRIT True H1975_Epitope_Rep2 1149.6730739355698 1149.67196993586 71.068 2 -1.103921159051475 0.33888831517529816 1.0 ['ENST00000585917.5_1_19:28284461-28284521:+|nuORF'] 44026 4099 ILKTYEKELLY True H1975_Epitope_Rep1 1411.79626832967 1411.79461490379 20.663 3 -1.103930078206967 0.33888831517529816 1.0 ['ADAM7|p.E57K|1|0.28|ENSG00000069206|chr8:24447198-24447198|G/A|missense_variant'] 21837 9964 ESDVVQELLKY True H1975_Epitope_Rep2 1321.6765471198098 1321.6754499358601 43.319 2 -1.1041018568417802 0.3389482651796778 1.0 ['ENSG00000055483|ENST00000449938|USP36', 'USP36|p.K1086Nfs*25|1|0.3|ENSG00000055483|chr17:78798534-78798534|T/-|frameshift_variant'] 26455 13936 FINHQQKL True PC9_epitope_Rep4 1026.5610638751 1026.5599699358602 61.508 2 -1.1041612909381182 0.3389482651796778 1.0 ['CCNY-VWA3B|1|fusion', 'CCNY-VWA3B|2|fusion'] 81728 17113 PSALARALTWR True PC9_epitope_Rep6 1240.70403971068 1240.70294993586 78.401 2 -1.1041617656792724 0.3389482651796778 1.0 ['ENSG00000179921|ENST00000519574|GPBAR1'] 46197 9346 ITDISKNSV True PC9_epitope_Rep1 975.52367530687 975.52256993586 40.806 2 -1.1041918267622015 0.3389482651796778 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 131195 25092 VVPIEVLPTV True NCI_RA007_Epitope_Rep1 1064.648147544 1064.6470499358602 103.84 2 -1.1042418126382565 0.3389697055748454 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 93291 6021 RRRWSQFLFTF True NCI_RA007_Epitope_Rep5 1542.8208007984201 1542.8197099358601 29.843 2 -1.104287041034503 0.3389782378604435 1.0 ['ENST00000217957.9_3_X:107301321-107310193:+|nuORF'] 12128 4117 DIHVTVQPK True NCI_RA007_Epitope_Rep4 1035.5712942056298 1035.57018993586 22.119 2 -1.1044059961801564 0.33898239454798906 1.0 ['ENSG00000213965|ENST00000397061|NUDT19'] 131196 25471 VVPIEVLPTV True PC9_epitope_Rep3 1064.648147544 1064.6470499358602 103.42 2 -1.1044070440356417 0.33898239454798906 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 124057 23394 VKRGSGVG True NCI_RA007_Epitope_Rep5 758.4398861132598 758.43878993586 97.279 2 -1.104517320313476 0.33901674045200514 1.0 ['ENST00000425081.2_1_17:1420280-1421117:+|nuORF'] 139028 8292 YSHRWKRN True PC9_epitope_Rep4 1145.5842589311699 1145.58262490379 39.355 3 -1.1045596576518348 0.3390289858813205 1.0 ['nc|ENSG00000120594|Q6UX71-2|PLXDC2', 'ENSG00000120594|ENST00000377252|PLXDC2'] 115894 8124 TVPEPRVP True H1975_Epitope_Rep2 893.4970666362099 893.49596993586 36.199 2 -1.1045939108655969 0.3390289858813205 1.0 ['ENST00000366613.1_1_1:234509430-234509547:+|nuORF'] 59606 5428 LGSETAERPPD True H1975_Epitope_Rep3 1170.5516809598598 1170.5505899358602 25.938 2 -1.1046004241402247 0.3390289858813205 1.0 ['ENST00000334286.7_1_13:78492715-78492892:-|nuORF'] 28607 13667 FSQTKHHWWWK True H1975_Epitope_Rep1 1569.7629515691299 1569.76184993586 57.705 2 -1.1046149909002336 0.3390289858813205 1.0 ['MGAT2|p.T412Sfs*8|1|0.53|ENSG00000168282|chr14:49622499-49622502|CTAA/-|frameshift_variant', 'ENSG00000168282|ENST00000305386|MGAT2'] 111465 13255 TLLERLFSYY True H1975_Epitope_Rep1 1303.68123857743 1303.68014993586 56.083 2 -1.1046715431014265 0.3390289858813205 1.0 ['nc|ENSG00000196535|Q92614-3|MYO18A', 'nc|ENSG00000196535|Q92614-4|MYO18A', 'ENSG00000196535|ENST00000527372|MYO18A', 'nc|ENSG00000196535|Q92614-2|MYO18A', 'nc|ENSG00000196535|Q92614-5|MYO18A'] 122084 22582 VGRCRAWLRL True PC9_epitope_Rep4 1228.6975148615998 1228.69697496793 95.095 1 -1.1046781267673995 0.3390289858813205 1.0 ['ENSG00000225190|ENST00000430334|PLEKHM1', 'PLEKHM1|p.T670Hfs*41|1|0.31|ENSG00000225190|chr17:45453844-45453844|T/-|frameshift_variant', 'ENST00000578036.5_1_17:62801160-62825332:-|nuORF', 'ENST00000584585.1_1_17:62817020-62825332:-|nuORF', 'ENST00000580919.5_1_17:62811233-62825332:-|nuORF', 'ENST00000397718.8_1_17:62816508-62825332:-|nuORF', 'ENST00000582986.5_1_17:62801160-62833227:-|nuORF'] 95865 7339 SDNDMSAVYRA True NCI_RA007_Epitope_Rep1 1227.51900093259 1227.5179099358602 32.541 2 -1.104695297483941 0.3390289858813205 1.0 ['nc|ENSG00000140632|Q49A26-5|GLYR1', 'nc|ENSG00000140632|Q49A26-2|GLYR1', 'nc|ENSG00000140632|Q49A26-3|GLYR1', 'ENSG00000140632|ENST00000321919|GLYR1', 'nc|ENSG00000140632|Q49A26-4|GLYR1'] 57088 9370 LEELHVIDVK True NCI_RA007_Epitope_Rep2 1193.6655885132898 1193.66448993586 41.056 2 -1.1047033859627906 0.3390289858813205 1.0 ['ENSG00000167986|ENST00000301764|DDB1', 'ENST00000537120.5_1_11:61091345-61100440:-|nuORF'] 36761 2816 GVPEAEVTWFR True NCI_RA007_Epitope_Rep2 1289.6404363946099 1289.63878490379 15.281 3 -1.1048126929233004 0.3390289858813205 1.0 ['ENSG00000178031|ENST00000380548|ADAMTSL1', 'ENST00000380559.7_1_9:18706652-18908543:+|nuORF', 'nc|ENSG00000178031|Q8N6G6-5|ADAMTSL1', 'nc|ENSG00000178031|Q8N6G6-6|ADAMTSL1'] 45344 10378 ISDEFSEVIK True PC9_epitope_Rep5 1165.58666948625 1165.5855699358601 44.903 2 -1.1048516717496306 0.33905895106339046 1.0 ['SF1-EHD1|2|fusion', 'SF1-EHD1|1|fusion', 'ENSG00000110047|ENST00000320631|EHD1', 'ENSG00000013016|ENST00000322054|EHD3'] 53112 21198 KSFYSPCRR True PC9_epitope_Rep3 1142.5654976325397 1142.56440993586 86.828 2 -1.104877988660138 0.33905895106339046 1.0 ['ENST00000456633.1_1_1:155531903-155533104:+|nuORF'] 54961 11198 LAHSALSL True PC9_epitope_Rep5 810.4599528515001 810.45884993586 48.061 2 -1.1049258571163254 0.33906748054562585 1.0 ['ENSG00000167656|ENST00000301263|LY6D'] 72700 9026 MYLPPDDP True PC9_epitope_Rep1 946.4106197005799 946.40952993586 39.568 2 -1.1049650814857408 0.339075787490483 1.0 ['ENSG00000183479|ENST00000370231|TREX2', 'nc|ENSG00000183479|Q9BQ50-1|TREX2'] 67659 13689 LTFKKSKDM True NCI_RA007_Epitope_Rep3 1096.5950664253198 1096.59396993586 61.158 2 -1.1050418802352866 0.339075787490483 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 83629 23277 QDYDYHFWEEF True PC9_epitope_Rep5 1577.6099241119698 1577.60882993586 94.522 2 -1.1050470582732355 0.339075787490483 1.0 ['UGT2A3|p.Q331Tfs*23|1|0.24|ENSG00000135220|chr4:68932633-68932634|-/T|frameshift_variant', 'ENSG00000135220|ENST00000251566|UGT2A3'] 45898 3622 ISREQMILWD True NCI_RA007_Epitope_Rep1 1289.6438075228898 1289.64217490379 18.031 3 -1.1050642342715213 0.339075787490483 1.0 ['nc|ENSG00000152270|Q13370-2|PDE3B', 'ENSG00000152270|ENST00000282096|PDE3B', 'ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 25774 23100 FFSIHIRI True PC9_epitope_Rep5 1031.59163572739 1031.59052993586 93.842 2 -1.1050773469658839 0.3390843162051256 1.0 ['ENSG00000165168|ENST00000378588|CYBB', 'CYBB|p.G359W|1|0.26|ENSG00000165168|chrX:37804054-37804054|G/T|missense_variant'] 71301 12518 MHCMWWERWMK True H1975_Epitope_Rep3 1622.67672204098 1622.6756299358601 53.348 2 -1.1051285047130834 0.33909284469965806 1.0 ['ENST00000301180.9_1_12:51133363-51135252:+|nuORF'] 130175 20983 VTRSRKWR True PC9_epitope_Rep2 1087.6362945040298 1087.6351899358601 86.162 2 -1.1052006566876247 0.33911427686590273 1.0 ['ENST00000309117.10_1_21:38639566-38639725:-|nuORF'] 68902 5506 LVERNPDPAIS True H1975_Epitope_Rep3 1209.6353510141698 1209.63424993586 26.23 2 -1.1052618322377767 0.3391649894204469 1.0 ['nc|ENSG00000229809|P0C7X2-5|ZNF688', 'ENSG00000229809|ENST00000223459|ZNF688'] 133690 21295 WLAANNGD True PC9_epitope_Rep4 859.38243080679 859.38132993586 90.079 2 -1.1052641767472955 0.3391649894204469 1.0 ['DELE1|p.S441Afs*3|1|0.13|ENSG00000081791|chr5:141938525-141938525|G/-|frameshift_variant', 'ENSG00000081791|ENST00000432126|DELE1'] 134169 23774 WRKVLLKG True NCI_RA007_Epitope_Rep3 998.6389202729798 998.6378299358599 103.04 2 -1.105289134843391 0.3391649894204469 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 64337 10474 LQNRRLFQSLH True H1975_Epitope_Rep3 1410.7844152896998 1410.7833099358602 45.351 2 -1.1052997659737875 0.3391649894204469 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 34456 4895 GQAVGHIP True NCI_RA007_Epitope_Rep5 777.4133370122499 777.41222993586 25.52 2 -1.1053105351457244 0.3391649894204469 1.0 ['ENST00000562866.1_1_16:89782895-89783186:+|nuORF'] 77610 14831 NYVAQLILD True PC9_epitope_Rep5 1047.5600608155898 1047.5589699358602 62.048 2 -1.1053203384217882 0.3391649894204469 1.0 ['ENSG00000018699|ENST00000317907|TTC27'] 45793 14971 ISNVWFDRFKI True NCI_RA007_Epitope_Rep1 1423.7612202336297 1423.76012993586 62.298 2 -1.1053264254827129 0.3391649894204469 1.0 ['ENSG00000143353|ENST00000366928|LYPLAL1', 'ENST00000463964.5_1_1:219347256-219385067:+|nuORF', 'ENST00000496776.5_1_1:219366436-219366613:+|nuORF'] 51953 23399 KKVRKGHIKR True NCI_RA007_Epitope_Rep4 1248.8254922560398 1248.8238449037901 101.57 3 -1.1053299998462165 0.3391649894204469 1.0 ['CFAP20|p.N31K|2|0.17|ENSG00000070761|chr16:58116943-58116943|A/C|missense_variant'] 55844 15716 LDEYMNEFK True PC9_epitope_Rep1 1187.5168756742698 1187.5157699358601 65.274 2 -1.1053569079070915 0.3391649894204469 1.0 ['nc|ENSG00000066933|B2RTY4-5|MYO9A', 'nc|ENSG00000066933|B2RTY4-2|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A'] 20797 7772 EQNALYSYQK True H1975_Epitope_Rep1 1242.5880664685799 1242.58696993586 34.851 2 -1.1053769009028225 0.3391649894204469 1.0 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'CFAP54|p.A1931Efs*73|1|0.17|ENSG00000188596|chr12:96684723-96684723|C/-|frameshift_variant'] 136399 18642 YHEHLRKDLPS True NCI_RA007_Epitope_Rep1 1393.7102472899298 1393.70914993586 76.651 2 -1.1053986218234262 0.3391649894204469 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 83443 7535 QDAQEFLLHLV True H1975_Epitope_Rep1 1311.68230120659 1311.6812099358601 33.977 2 -1.1054022146704119 0.3391649894204469 1.0 ['USP13|p.F452L|1|0.32|ENSG00000058056|chr3:179740348-179740348|C/G|missense_variant'] 61431 13151 LLESQTAP True PC9_epitope_Rep5 857.4494477374499 857.44834993586 55.589 2 -1.1054084900009933 0.33917351533370316 1.0 ['nc|ENSG00000147130|Q14202-2|ZMYM3', 'ENSG00000147130|ENST00000314425|ZMYM3', 'ZMYM3|p.T208Pfs*19|1|0.63|ENSG00000147130|chrX:71252635-71252635|C/-|frameshift_variant', 'nc|ENSG00000147130|Q14202-3|ZMYM3', 'ENST00000489332.1_1_X:70467340-70473105:-|nuORF'] 46027 11283 ISVKVIDDEEY True PC9_epitope_Rep5 1308.64491263836 1308.6438099358602 48.393 2 -1.10549030045379 0.3392336472713198 1.0 ['nc|ENSG00000183023|P32418-5|SLC8A1', 'ENSG00000183023|ENST00000332839|SLC8A1'] 103194 23353 SQPQISRICKN True PC9_epitope_Rep4 1272.6608545693598 1272.6597499358602 98.086 2 -1.1055866866110373 0.3392421720788017 1.0 ['ENSG00000173825|ENST00000309880|TIGD3'] 66752 22507 LSTVHKELSST True PC9_epitope_Rep4 1200.635016661 1200.6333749037901 94.803 3 -1.105625071943234 0.33927649912271646 1.0 ['ENST00000472469.5_2_3:58870372-59035390:-|nuORF', 'ENSG00000163689|ENST00000482387|CFAP20DC'] 13324 13266 DLYYVRFTEWL True NCI_RA007_Epitope_Rep2 1503.7398160827097 1503.73870993586 56.237 2 -1.1056562815981383 0.33928456249435623 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 124960 10377 VLMKVCSV True PC9_epitope_Rep5 877.4765315157699 877.47542993586 44.899 2 -1.105725118123302 0.33928456249435623 1.0 ['ENST00000595295.1_1_19:58369960-58370206:-|nuORF'] 44455 9197 INLQGTKKEE True NCI_RA007_Epitope_Rep5 1158.6244519773 1158.62334993586 42.027 2 -1.1057344343738342 0.33928456249435623 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2', 'ENST00000533661.1_1_11:10038431-10064504:-|nuORF'] 15300 7121 EAIFPIYP True H1975_Epitope_Rep3 948.49566965388 948.49456993586 32.361 2 -1.105744435008779 0.33928456249435623 1.0 ['nc|ENSG00000140481|Q8N5R6|CCDC33', 'nc|ENSG00000140481|Q8N5R6-2|CCDC33', 'ENST00000560148.5_2_15:74510872-74513593:+|nuORF'] 16437 13032 EELLRKTK True PC9_epitope_Rep2 1015.6025943339099 1015.60148993586 55.409 2 -1.1057825695115269 0.33928456249435623 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'TTN|p.H3057Ifs*2|2|0.16|ENSG00000155657|chr2:178768151-178768151|A/-|frameshift_variant', 'TTN|p.P2078Qfs*61|1|0.14|ENSG00000155657|chr2:178775631-178775631|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 75075 652 NMQKARELWD True NCI_RA007_Epitope_Rep1 1289.61865540421 1289.61700490379 3.4455 3 -1.105842417211051 0.33928456249435623 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 11480 10114 DGDVIGPLP True H1975_Epitope_Rep3 881.44944773745 881.44834993586 43.944 2 -1.1058440589447402 0.33928456249435623 1.0 ['ENSG00000154781|ENST00000383794|CCDC174'] 36974 15624 GVRLLRQDPI True PC9_epitope_Rep3 1165.69314067381 1165.69150490379 65.245 3 -1.1059698881095692 0.3393790069787541 1.0 ['ENST00000432857.2_1_3:9792686-9793638:+|nuORF', 'nc|ENSG00000114026|O15527-6|OGG1', 'nc|ENSG00000114026|O15527-8|OGG1', 'nc|ENSG00000114026|O15527-2|OGG1', 'ENSG00000114026|ENST00000344629|OGG1', 'nc|ENSG00000114026|O15527-7|OGG1', 'nc|ENSG00000114026|O15527-5|OGG1', 'nc|ENSG00000114026|O15527-3|OGG1', 'nc|ENSG00000114026|O15527-4|OGG1'] 86413 16801 QQPLRRKRR True NCI_RA007_Epitope_Rep5 1236.7639546286398 1236.76284993586 71.377 2 -1.1059711942653658 0.3393790069787541 1.0 ['ENST00000373318.6_1_2:241494422-241496622:-|nuORF', 'ENST00000272972.7_1_2:241494422-241497352:-|nuORF', 'ENST00000418505.3_1_2:241494422-241508600:-|nuORF', 'ENST00000405002.5_1_2:241494422-241500367:-|nuORF'] 139244 13959 YTATSLSHSN True PC9_epitope_Rep6 1079.48835242731 1079.48724993586 65.548 2 -1.1061026677277772 0.33943912695750883 1.0 ['ENSG00000164588|ENST00000303230|HCN1', 'HCN1|p.A702Rfs*78|1|0.17|ENSG00000164588|chr5:45262491-45262491|G/-|frameshift_variant'] 27503 7993 FPERALAAELP True NCI_RA007_Epitope_Rep1 1212.6502728023197 1212.64916993586 35.083 2 -1.1061662070583778 0.3394605471924461 1.0 ['ENST00000337554.7_1_22:43547558-43555226:+|nuORF'] 18947 9826 ELFFMRTP True H1975_Epitope_Rep3 1039.51608782863 1039.51498993586 42.822 2 -1.106218731741445 0.3394775878748791 1.0 ['ENSG00000122728|ENST00000242310|TAF1L'] 10273 12070 CGHGGVVV True NCI_RA007_Epitope_Rep2 726.34829422754 726.34774496793 51.541 1 -1.1062399268473622 0.3394775878748791 1.0 ['ENST00000467101.5_1_20:60776202-60776382:+|nuORF'] 19040 16870 ELGNQWIN True PC9_epitope_Rep1 972.46649478392 972.46538993586 69.715 2 -1.1062971095313612 0.33950752641015386 1.0 ['nc|ENSG00000075651|Q13393-4|PLD1', 'ENSG00000075651|ENST00000351298|PLD1', 'nc|ENSG00000075651|Q13393-2|PLD1'] 128775 7090 VSQVERSL True PC9_epitope_Rep4 916.4977949121999 916.49668993586 34.54 2 -1.1063019228959388 0.33950752641015386 1.0 ['ENSG00000277858|ENST00000354514|H2AB2', 'ENSG00000277745|ENST00000615853|H2AB3', 'ENSG00000274183|ENST00000620016|H2AB1'] 19149 7371 ELISFPLKEYF True NCI_RA007_Epitope_Rep1 1384.72785441668 1384.7262149037902 32.666 3 -1.1063500157651736 0.33951604581570527 1.0 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 114273 10613 TSALGGMKI True PC9_epitope_Rep1 876.47388866348 876.47278993586 45.715 2 -1.1063946970271417 0.3395245650014833 1.0 ['ENST00000342449.7_2_21:40562525-40562618:-|nuORF'] 127092 17089 VQAPLAKP True NCI_RA007_Epitope_Rep3 822.49633836022 822.49524993586 75.087 2 -1.1064187679477846 0.3395459822004385 1.0 ['ENST00000498926.6_1_12:133297723-133297774:+|nuORF'] 62939 10537 LNDFFSRFWAQ True PC9_epitope_Rep4 1429.67788453249 1429.6762349037901 48.258 3 -1.1064589117416102 0.339554500780333 1.0 ['ENSG00000178409|ENST00000369042|BEND3', 'BEND3|p.E692Rfs*21|1|0.12|ENSG00000178409|chr6:107069117-107069118|-/G|frameshift_variant'] 1963 7092 AEIQHITYQHW True H1975_Epitope_Rep3 1424.68369818892 1424.68260993586 32.247 2 -1.1064782526552133 0.3395586395470316 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 18497 13781 EKMWRQEERLR True NCI_RA007_Epitope_Rep1 1559.7990793776698 1559.7979899358602 57.622 2 -1.1064945578556489 0.3395586395470316 1.0 ['ENSG00000174450|ENST00000567107|GOLGA6L2', 'nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2', 'nc|ENSG00000174450|Q8N9W4-2|GOLGA6L2'] 126230 17952 VPGVLAVAP True PC9_epitope_Rep1 821.50108938749 821.5005449679301 73.843 1 -1.1065506438967556 0.3395671576340702 1.0 ['ENST00000337304.2_1_22:39916921-39917209:+|nuORF'] 92741 17344 RRKKYGIVL True PC9_epitope_Rep6 1131.72404687927 1131.72241490379 79.328 3 -1.1065766280955571 0.33957567550138645 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 34539 9287 GQERQGAE True PC9_epitope_Rep3 873.3940581196498 873.39296993586 40.664 2 -1.10661688182762 0.33958419314898886 1.0 ['ENST00000533088.1_1_8:145703814-145715574:+|nuORF'] 21950 6728 ESLEGRMASH True H1975_Epitope_Rep1 1115.5029569456299 1115.50184993586 30.924 2 -1.106650939721279 0.33959174199538356 1.0 ['nc|ENSG00000168077|Q6AZY7-2|SCARA3', 'ENSG00000168077|ENST00000301904|SCARA3'] 103228 17374 SQRRRTLH True NCI_RA007_Epitope_Rep3 1052.59515796804 1052.59406993586 76.241 2 -1.106754665976167 0.33959174199538356 1.0 ['nc|ENSG00000168081|Q13519-2|PNOC', 'ENSG00000168081|ENST00000301908|PNOC'] 60196 13887 LIAINTFTTI True NCI_RA007_Epitope_Rep3 1105.6383111362902 1105.63720993586 61.946 2 -1.1067559922097034 0.33959174199538356 1.0 ['ENSG00000203733|ENST00000450456|GJE1'] 127682 5411 VRGESPAVLP True H1975_Epitope_Rep3 1023.5712942056298 1023.57018993586 25.875 2 -1.1067664782013122 0.33959174199538356 1.0 ['ENST00000466772.5_1_22:21065465-21081626:-|nuORF'] 57742 12279 LENPEKKTK True H1975_Epitope_Rep1 1085.60807363717 1085.6069699358602 52.256 2 -1.1067844048445556 0.33959174199538356 1.0 ['L1M3_dup291|chr1:173794566-173795729:+|1.1397011898258065|0.3648644439828962|1.64|502.0|14|1|sense'] 40670 6173 HTLLSYVHF True H1975_Epitope_Rep3 1115.57637958607 1115.5752899358602 28.755 2 -1.1068191724552916 0.33959174199538356 1.0 ['ENSG00000176922|ENST00000322101|OR51S1'] 39499 11000 HPAREGPGSR True PC9_epitope_Rep5 1062.5318890051399 1062.5307899358602 47.299 2 -1.1068199399586582 0.33959174199538356 1.0 ['ENST00000264560.11_1_19:746959-747340:+|nuORF'] 57214 21179 LEEYAKKRI True PC9_epitope_Rep1 1148.65535818276 1148.6542699358602 86.3 2 -1.1069036540745794 0.33959174199538356 1.0 ['FGD6|p.I1182L|1|0.19|ENSG00000180263|chr12:95094648-95094648|T/A|missense_variant'] 111513 22257 TLLQEDYAFFR True H1975_Epitope_Rep1 1401.69286589029 1401.69176993586 92.601 2 -1.1069190056946077 0.33959174199538356 1.0 ['SLC12A9|p.G334A|1|0.13|ENSG00000146828|chr7:100859908-100859908|G/C|missense_variant'] 45835 19174 ISPYMHPTIPE True PC9_epitope_Rep2 1283.6220094491503 1283.62090993586 79.125 2 -1.1069644170280928 0.33959174199538356 1.0 ['ENSG00000141579|ENST00000269394|ZNF750', 'ZNF750|p.P316Rfs*50|1|0.27|ENSG00000141579|chr17:82831508-82831508|G/-|frameshift_variant', 'ZNF750|p.S440Gfs*17|1|0.34|ENSG00000141579|chr17:82831131-82831138|GTGCGCTG/-|frameshift_variant'] 118429 13700 VDPLPFPGPFP True PC9_epitope_Rep1 1181.6120963884498 1181.61046490379 57.548 3 -1.1069669612831656 0.33959174199538356 1.0 ['nc|ENSG00000173153|P11474-2|ESRRA', 'ENSG00000173153|ENST00000000442|ESRRA'] 69229 8607 LVNFIERVP True NCI_RA007_Epitope_Rep1 1085.62332977849 1085.62222993586 37.481 2 -1.1069920569046419 0.33959174199538356 1.0 ['nc|ENSG00000104299|Q9NV88-3|INTS9', 'ENSG00000104299|ENST00000521022|INTS9', 'ENST00000520983.5_1_8:28651295-28747426:-|nuORF', 'nc|ENSG00000104299|Q9NV88-2|INTS9'] 61049 10643 LLASFKNEG True H1975_Epitope_Rep1 977.5181960036099 977.51708993586 45.895 2 -1.1070246629108393 0.33959174199538356 1.0 ['ENST00000573881.1_1_17:9444067-9460824:-|nuORF', 'ENSG00000170310|ENST00000306357|STX8'] 82366 11069 PTTPSSVRCP True PC9_epitope_Rep4 1043.5069796969099 1043.50588993586 50.354 2 -1.1071226787939623 0.33960025789813025 1.0 ['ENST00000424457.5_1_17:39929174-39942952:-|nuORF'] 58366 8078 LEVHTEALAA True H1975_Epitope_Rep1 1052.5502244078798 1052.54912993586 36.015 2 -1.1071389902562143 0.33962920942705377 1.0 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA', 'ENST00000466538.1_1_1:227299979-227300497:-|nuORF'] 108589 19142 TEIGLHDLRKK True H1975_Epitope_Rep3 1308.75138382592 1308.75028993586 80.265 2 -1.1072041269113106 0.33962920942705377 1.0 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ABCC4|p.L1261Ffs*59|1|0.26|ENSG00000125257|chr13:95034692-95034693|-/AA|frameshift_variant', 'ENSG00000125257|ENST00000645237|ABCC4'] 60319 18203 LIFNKFSHFYR True PC9_epitope_Rep5 1470.77720465094 1470.7761099358602 75.028 2 -1.1072104392408066 0.33962920942705377 1.0 ['ENSG00000156486|ENST00000287042|KCNS2'] 100882 12521 SLSHEYHL True PC9_epitope_Rep3 984.4664947839201 984.46538993586 53.187 2 -1.1072431715755222 0.33962920942705377 1.0 ['ENST00000475700.1_1_1:112309433-112309511:+|nuORF'] 91254 11771 RLTKEKLDF True PC9_epitope_Rep4 1148.65535818276 1148.6537249037901 53.044 3 -1.10724712304917 0.33962920942705377 1.0 ['nc|ENSG00000075292|Q14966-3|ZNF638', 'ENSG00000075292|ENST00000264447|ZNF638', 'nc|ENSG00000075292|Q14966-2|ZNF638', 'nc|ENSG00000075292|Q14966-6|ZNF638', 'nc|ENSG00000075292|Q14966-4|ZNF638'] 45275 12623 ISAAHSYNP True PC9_epitope_Rep3 958.4508447197801 958.44974993586 53.577 2 -1.1072617675700687 0.33962920942705377 1.0 ['ENSG00000087448|ENST00000381271|KLHL42'] 60061 25539 LHSKLISGG True PC9_epitope_Rep1 910.52361573722 910.52250993586 103.24 2 -1.1073255369732586 0.33962920942705377 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 20943 8521 EQWEMHRLEKE True PC9_epitope_Rep4 1513.6983622768896 1513.69726993586 40.252 2 -1.1073344930626603 0.33962920942705377 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 82632 9730 PVLIHGEN True PC9_epitope_Rep4 877.4657665079301 877.46466993586 45.065 2 -1.1073650552704226 0.33962920942705377 1.0 ['nc|ENSG00000104381|Q8TB36-2|GDAP1', 'ENSG00000104381|ENST00000220822|GDAP1'] 52682 12435 KQGKAVLL True NCI_RA007_Epitope_Rep3 855.5541875895099 855.55308993586 56.131 2 -1.1073721794743587 0.33962920942705377 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant'] 59653 15308 LGSQRFLL True PC9_epitope_Rep4 932.5443511817999 932.54324993586 66.816 2 -1.1073868457698697 0.33962920942705377 1.0 ['ENST00000342879.7_1_19:35646325-35646499:+|nuORF'] 68024 9269 LTMVCRPA True PC9_epitope_Rep2 889.4513793970899 889.45028993586 40.992 2 -1.10739578039944 0.33962920942705377 1.0 ['ENST00000451956.1_1_3:50290513-50293631:+|nuORF'] 13004 10971 DLQIYFKYHK True H1975_Epitope_Rep1 1353.7081220316102 1353.7070299358602 47.165 2 -1.1074019916231557 0.33962920942705377 1.0 ['nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2'] 64641 11683 LRGHRRRHR True NCI_RA007_Epitope_Rep4 1242.7394712163 1242.73783490379 51.898 3 -1.1074498866993954 0.33962920942705377 1.0 ['ENST00000481474.5_1_6:28891330-28891657:-|nuORF'] 100805 15195 SLRSTFSLPE True PC9_epitope_Rep1 1135.58733819259 1135.58624993586 63.268 2 -1.1074987179793183 0.3396377231998969 1.0 ['nc|ENSG00000131653|Q6Q0C0-2|TRAF7', 'ENSG00000131653|ENST00000326181|TRAF7'] 96994 8680 SEVNFKEL True NCI_RA007_Epitope_Rep4 964.48656152216 964.48546993586 40.175 2 -1.1075883864488514 0.3396462367532166 1.0 ['nc|ENSG00000152939|Q8N4S9-3|MARVELD2', 'ENSG00000152939|ENST00000325631|MARVELD2', 'nc|ENSG00000152939|Q8N4S9-2|MARVELD2'] 10902 8776 DASILISNVCS True H1975_Epitope_Rep1 1120.54342477528 1120.5423299358602 38.688 2 -1.1076124099892877 0.3396676421674166 1.0 ['ENSG00000161956|ENST00000321337|SENP3', 'ENST00000583277.1_1_17:7467715-7468388:+|nuORF'] 65292 6682 LSEKNVCKIYL True H1975_Epitope_Rep1 1308.7111588067198 1308.71006993586 30.755 2 -1.1076232161242727 0.3396715309647811 1.0 ['ENSG00000187187|ENST00000347077|ZNF546'] 100964 5049 SLSSLREQ True NCI_RA007_Epitope_Rep3 918.4770594676199 918.47596993586 26.855 2 -1.1076366725879738 0.3396715309647811 1.0 ['ENSG00000185052|ENST00000328041|SLC24A3', 'SLC24A3-MACROD2|1|fusion'] 122506 13911 VGSSAFLL True PC9_epitope_Rep2 792.43815477776 792.43704993586 58.787 2 -1.107644256779698 0.3396715309647811 1.0 ['ENST00000479933.2_1_1:12186012-12202358:+|nuORF', 'nc|ENSG00000120949|P28908-3|TNFRSF8', 'ENSG00000120949|ENST00000263932|TNFRSF8'] 130149 9501 VTRPSEFNY True NCI_RA007_Epitope_Rep2 1111.52982331647 1111.5287299358602 41.57 2 -1.1076470203017483 0.3396715309647811 1.0 ['ENSG00000166825|ENST00000300060|ANPEP'] 62092 23969 LLNILMQLRK True PC9_epitope_Rep1 1240.76894846636 1240.76784993586 97.001 2 -1.1076500182526987 0.3396715309647811 1.0 ['ENSG00000153147|ENST00000283131|SMARCA5', 'nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 9512 13356 AWPLPVRP True NCI_RA007_Epitope_Rep5 934.5388718785399 934.53776993586 58.06 2 -1.1076735578189982 0.33968004331403967 1.0 ['ENST00000395621.7_1_22:51066128-51066413:-|nuORF', 'ENST00000356098.9_1_22:51066128-51066491:-|nuORF', 'ENST00000216124.9_1_22:51066128-51066491:-|nuORF'] 4892 8112 ALGHPEGLPAP True H1975_Epitope_Rep1 1057.55564414149 1057.5545499358602 36.147 2 -1.1076778600005361 0.3397014463608941 1.0 ['ENST00000441698.6_1_8:9911977-10065409:+|nuORF', 'ENST00000317173.8_1_8:9911977-10102635:+|nuORF'] 58491 11152 LEYQTAVMRRD True H1975_Epitope_Rep1 1380.6819839367597 1380.68088993586 47.864 2 -1.107720179285015 0.3397140905165191 1.0 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2'] 64163 19208 LQFLQGRTL True PC9_epitope_Rep5 1074.61857875122 1074.61748993586 78.923 2 -1.1077272900554556 0.3397140905165191 1.0 ['ENST00000512908.2_1_5:70398727-70422449:-|nuORF', 'ENST00000315147.8_1_5:70265933-70281744:-|nuORF', 'ENST00000511830.2_1_5:69390488-69422514:-|nuORF', 'nc|ENSG00000249437|Q13075-2|NAIP', 'ENSG00000249437|ENST00000517649|NAIP'] 82765 10138 PVRDIDFHK True PC9_epitope_Rep5 1125.5930922793698 1125.59198993586 43.98 2 -1.1077277147537548 0.3397140905165191 1.0 ['COPA|p.G56D|1|0.18|ENSG00000122218|chr1:160339970-160339970|C/T|missense_variant'] 64824 7353 LSAFPKNR True NCI_RA007_Epitope_Rep1 931.5239500903899 931.52284993586 32.595 2 -1.1077312647449147 0.33971822271491 1.0 ['ENSG00000171989|ENST00000307144|LDHAL6B'] 23033 9939 EVKKNKQENDK True H1975_Epitope_Rep3 1358.71539224002 1358.71428993586 43.262 2 -1.1077601873033402 0.33971822271491 1.0 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 32463 5238 GGHVLAGF True NCI_RA007_Epitope_Rep3 756.39187329168 756.39076993586 27.609 2 -1.107778068978712 0.33973524445418335 1.0 ['ENSG00000188266|ENST00000388988|HYKK'] 125635 24984 VMGGRRRRRRR True PC9_epitope_Rep3 1454.8701681160198 1454.8690699358601 101.45 2 -1.1077789319507831 0.33973524445418335 1.0 ['ENSG00000229674|ENST00000448797|H2AL3'] 90103 15912 RGRGKGPA True NCI_RA007_Epitope_Rep4 797.4620185401699 797.46092993586 69.076 2 -1.1078228952787588 0.33975664458250626 1.0 ['ENSG00000117318|ENST00000374561|ID3'] 10934 13665 DAVRHSRKHLW True H1975_Epitope_Rep3 1403.7534495145899 1403.7523499358601 57.853 2 -1.1079432487344958 0.3398123324396783 1.0 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 60067 23566 LHSKLISGG True PC9_epitope_Rep6 910.52361573722 910.52250993586 103.79 2 -1.1079483452674945 0.3398123324396783 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 104851 8690 STENHRKKK True H1975_Epitope_Rep1 1126.6207040095398 1126.6196099358601 38.357 2 -1.1079807603226353 0.33981646173278685 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 38662 20542 HHQNEVINY True H1975_Epitope_Rep2 1152.5312202988 1152.52957490379 85.103 3 -1.1079861849611399 0.33981646173278685 1.0 ['ENSG00000163818|ENST00000296135|LZTFL1', 'ENST00000495864.5_1_3:45877080-45883504:-|nuORF', 'ENST00000480156.5_1_3:45874526-45883504:-|nuORF'] 97385 7136 SGDENFYAYGF True NCI_RA007_Epitope_Rep3 1268.4985827578396 1268.4974899358601 35.19 2 -1.1080782391147 0.33982909948575185 1.0 ['C4BPA|p.E189D|1|0.41|ENSG00000123838|chr1:207124227-207124227|A/T|missense_variant'] 122051 7824 VGQTKDEN True PC9_epitope_Rep4 889.4141248578899 889.41302993586 37.502 2 -1.1081261512452902 0.33982909948575185 1.0 ['ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 111945 9065 TLSCLLPCSPP True PC9_epitope_Rep2 1129.55115300801 1129.5495149037902 40.214 3 -1.108134154276669 0.33982909948575185 1.0 ['ENST00000525190.1_1_11:65688642-65688903:+|nuORF'] 12919 11896 DLNEALTQPV True PC9_epitope_Rep4 1098.55570371114 1098.55460993586 53.534 2 -1.1081402426438616 0.3398376079391674 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 105651 6533 SVFPQRAQ True NCI_RA007_Epitope_Rep2 931.4875645816699 931.48646993586 30.023 2 -1.1083466841653309 0.3398845271541614 1.0 ['ENST00000458274.1_1_X:149108278-149108993:+|nuORF'] 74352 10248 NIRVSIKEPSK True NCI_RA007_Epitope_Rep1 1269.74048478905 1269.7393899358601 43.873 2 -1.108353705016221 0.3398845271541614 1.0 ['ENST00000554295.1_1_12:98849015-98849897:-|nuORF'] 81981 9603 PSSAEIFR True H1975_Epitope_Rep1 905.4606811274899 905.45958993586 41.863 2 -1.10836206852735 0.3398845271541614 1.0 ['ENST00000535730.1_1_11:73662114-73670750:+|nuORF', 'ENSG00000187726|ENST00000339764|DNAJB13'] 98560 11628 SILTIDDGIFE True PC9_epitope_Rep2 1221.6128842340897 1221.61123490379 50.053 3 -1.1083998284003032 0.3398845271541614 1.0 ['ENSG00000204389|ENST00000375651|HSPA1A', 'ENSG00000204388|ENST00000375650|HSPA1B', 'nc|ENSG00000204389|P0DMV8-2|HSPA1A', 'ENSG00000204390|ENST00000375654|HSPA1L'] 64336 10382 LQNRRLFQSLH True H1975_Epitope_Rep3 1410.7844152896998 1410.7833099358602 44.99 2 -1.1084643271699475 0.339897160972718 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 121299 13423 VGHLPSEP True PC9_epitope_Rep2 834.42356734278 834.42246993586 56.915 2 -1.1084723102929748 0.339897160972718 1.0 ['nc|ENSG00000143450|Q9UMX2-2|OAZ3', 'ENSG00000143450|ENST00000400999|OAZ3'] 114671 13147 TSRILRYL True PC9_epitope_Rep2 1020.6080140675199 1020.60690993586 55.842 2 -1.108487639993651 0.339897160972718 1.0 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2'] 124417 6265 VLEHQQWHKD True PC9_epitope_Rep4 1318.64183337694 1318.64017490379 31.151 3 -1.1086872347366148 0.33993969227597226 1.0 ['ENSG00000023608|ENST00000216294|SNAPC1'] 66279 6132 LSQESPRTP True H1975_Epitope_Rep3 1013.5141732523299 1013.51306993586 28.599 2 -1.1086930337257102 0.33993969227597226 1.0 ['nc|ENSG00000188162|Q6ZRI0|OTOG', 'ENSG00000188162|ENST00000399397|OTOG', 'nc|ENSG00000188162|Q6ZRI0-2|OTOG'] 127248 16704 VQISDKITISK True PC9_epitope_Rep3 1230.71835236214 1230.71724993586 69.384 2 -1.1086953779699098 0.33993969227597226 1.0 ['nc|ENSG00000162129|Q9H078-5|CLPB', 'nc|ENSG00000162129|Q9H078-3|CLPB', 'nc|ENSG00000162129|Q9H078-4|CLPB', 'ENSG00000162129|ENST00000538039|CLPB', 'nc|ENSG00000162129|Q9H078|CLPB', 'ENST00000538021.5_2_11:72004413-72018253:-|nuORF'] 65761 13706 LSIHQMVFAL True PC9_epitope_Rep5 1157.6267009067699 1157.6256099358602 57.747 2 -1.1087040705994464 0.33993969227597226 1.0 ['ENST00000604679.5_1_10:74619033-74620213:+|nuORF'] 71662 23441 MLSPRNHLI True PC9_epitope_Rep2 1079.59098410439 1079.5898899358601 95.637 2 -1.1087148523335009 0.33993969227597226 1.0 ['NFASC|p.Q438H|1|0.31|ENSG00000163531|chr1:204974213-204974213|G/C|missense_variant'] 24216 12223 EYVHLVCQMRM True H1975_Epitope_Rep2 1407.6461331053497 1407.64447490379 52.098 3 -1.1087576092051166 0.33996108397871216 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 13214 4906 DLTKKGKR True NCI_RA007_Epitope_Rep3 944.5767139392399 944.57560993586 26.287 2 -1.1087812013862157 0.3399865989743061 1.0 ['ENST00000563680.1_1_16:30004959-30006553:-|nuORF', 'ENST00000565996.1_1_16:30006421-30006926:-|nuORF', 'nc|ENSG00000149929|Q9BW71-3|HIRIP3', 'ENST00000563053.1_1_16:30005092-30006861:-|nuORF', 'nc|ENSG00000149929|Q9BW71-2|HIRIP3', 'ENSG00000149929|ENST00000279392|HIRIP3'] 133892 17259 WNAFRKDLCP True NCI_RA007_Epitope_Rep4 1248.6073624445198 1248.60571490379 74.734 3 -1.108803786580894 0.3399865989743061 1.0 ['ENST00000458001.2_1_13:114545557-114545857:+|nuORF'] 139651 3037 YTSFDMEEP True PC9_epitope_Rep6 1117.42739196353 1117.42628993586 17.458 2 -1.1088189517067766 0.3399865989743061 1.0 ['ENSG00000104237|ENST00000220676|RP1'] 119742 18113 VETLTIRR True NCI_RA007_Epitope_Rep1 986.58727862294 986.58673496793 74.597 1 -1.1088529051998715 0.33998995065514 1.0 ['ENSG00000137462|ENST00000642700|TLR2', 'TLR2|p.N414Tfs*2|1|0.56|ENSG00000137462|chr4:153704144-153704144|A/-|frameshift_variant'] 18404 11499 EKEALKQEVM-[Oxidation] True H1975_Epitope_Rep1 1219.6118390687097 1219.6107499358602 49.215 2 -1.1088682473911802 0.33998995065514 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 125297 20076 VLRSWWPRWWW True H1975_Epitope_Rep1 1656.8466216234397 1656.8455299358602 83.539 2 -1.1088693918671884 0.33998995065514 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 70658 4801 MCMKKMYLWEN True NCI_RA007_Epitope_Rep2 1475.6433562240297 1475.64169490379 23.302 3 -1.1088886391174857 0.33998995065514 1.0 ['ENST00000292211.4_1_1:154522462-154522513:-|nuORF'] 36160 21111 GVFGDVQL True H1975_Epitope_Rep3 833.42831837005 833.4277649679301 88.18 1 -1.1089010571247848 0.33998995065514 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-4|ADGRV1', 'ENST00000504142.2_2_5:89924394-89949789:+|nuORF'] 30766 9221 GAPELNGG True NCI_RA007_Epitope_Rep5 713.3344179852099 713.33386496793 42.119 1 -1.1089033975953602 0.33998995065514 1.0 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 99785 13960 SLGQRVLL True PC9_epitope_Rep4 884.5443511817999 884.54324993586 61.599 2 -1.1089633783692967 0.33998995065514 1.0 ['nc|ENSG00000178149|Q5D0E6-3|DALRD3', 'ENST00000498794.1_1_3:49055454-49055997:-|nuORF', 'ENST00000484831.5_1_3:49054806-49055997:-|nuORF', 'ENST00000460505.5_1_3:49053470-49055997:-|nuORF', 'nc|ENSG00000178149|Q5D0E6-2|DALRD3', 'ENSG00000178149|ENST00000341949|DALRD3'] 30322 9139 GADKKFARKP True H1975_Epitope_Rep1 1116.6403768249597 1116.63926993586 40.059 2 -1.1089659557822988 0.33998995065514 1.0 ['nc|ENSG00000107862|Q92538-3|GBF1', 'nc|ENSG00000107862|Q92538-2|GBF1', 'nc|ENSG00000107862|Q92538-1|GBF1', 'ENSG00000107862|ENST00000369983|GBF1'] 22598 6306 ETPQTVPA True PC9_epitope_Rep3 841.4181476091699 841.41704993586 29.287 2 -1.1089858251862046 0.33998995065514 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 16129 15650 EEEEQKRQEKK True H1975_Epitope_Rep1 1459.7266851997094 1459.7255899358602 65.486 2 -1.1090554649390816 0.33998995065514 1.0 ['ENSG00000169249|ENST00000307771|ZRSR2'] 82797 19702 PVRVVRNVKGG True NCI_RA007_Epitope_Rep2 1179.7200241279897 1179.7189299358602 81.587 2 -1.109059795730175 0.33998995065514 1.0 ['ENSG00000276043|ENST00000650932|UHRF1', 'nc|ENSG00000276043|Q96T88-2|UHRF1', 'ENST00000540175.1_1_12:20704556-20705942:+|nuORF'] 72157 13292 MRKQAVSDL True PC9_epitope_Rep1 1046.5542642424998 1046.55316993586 55.992 2 -1.109107180378574 0.3400113375763354 1.0 ['nc|ENSG00000122432|Q5VX52|SPATA1'] 88144 10003 QWQQRRWRQQE True H1975_Epitope_Rep2 1627.80800426859 1627.8069099358602 43.466 2 -1.1092000579119585 0.3400577111351574 1.0 ['ENST00000416426.6_2_17:55729477-55752284:+|nuORF'] 44083 12073 ILLQIKHIIR True NCI_RA007_Epitope_Rep4 1245.8285119478098 1245.8268749037902 53.438 3 -1.109213731246136 0.3400577111351574 1.0 ['ENSG00000114999|ENST00000233336|TTL', 'ENST00000476615.1_1_2:113258880-113278003:+|nuORF'] 116340 13708 TVYAEPPK True H1975_Epitope_Rep1 903.4701831820299 903.46963496793 57.866 1 -1.1092143249078141 0.3400577111351574 1.0 ['CEACAM5|p.D602Rfs*19|1|0.13|ENSG00000105388|chr19:41720945-41720946|-/C|frameshift_variant', 'ENSG00000105388|ENST00000221992|CEACAM5', 'RPS19-CEACAM5|3|fusion'] 59680 17030 LGTGKQSTP True PC9_epitope_Rep1 887.47124581119 887.47014993586 70.33 2 -1.109283459699311 0.3400577111351574 1.0 ['ENST00000513060.5_1_5:180669021-180669117:-|nuORF'] 53668 16519 KWTMEVICY True H1975_Epitope_Rep3 1171.5405883243097 1171.53948993586 69.036 2 -1.1093179172554042 0.3400577111351574 1.0 ['nc|ENSG00000170471|Q86X10-3|RALGAPB', 'ENSG00000170471|ENST00000262879|RALGAPB', 'RALGAPB|p.H382Tfs*2|3|0.12|ENSG00000170471|chr20:38517589-38517590|-/C|frameshift_variant', 'nc|ENSG00000170471|Q86X10-4|RALGAPB'] 41459 12393 IAWEPVQYFN True PC9_epitope_Rep4 1265.6080736371698 1265.60641490379 55.475 3 -1.1093199219500172 0.3400577111351574 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 13797 6050 DQTLPGVDIQQ True NCI_RA007_Epitope_Rep2 1212.59863115228 1212.5975299358602 28.138 2 -1.1093201898664962 0.3400577111351574 1.0 ['ENSG00000008226|ENST00000308059|DLEC1', 'nc|ENSG00000008226|Q9Y238-3|DLEC1'] 140188 14401 YVVHELVP True PC9_epitope_Rep1 954.5174677276199 954.51636993586 60.217 2 -1.1093475119176486 0.3400577111351574 1.0 ['ENSG00000141642|ENST00000269466|ELAC1'] 64335 10426 LQNRRLFQSLH True H1975_Epitope_Rep1 1410.7844152896998 1410.7833099358602 45.057 2 -1.1093584726227372 0.3400577111351574 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 617 6102 AASQRMEP True PC9_epitope_Rep1 888.4123510360799 888.41124993586 28.285 2 -1.109376545602009 0.3400577111351574 1.0 ['ENSG00000206503|ENST00000376809|HLA-A', 'nc|ENSG00000206503|P04439-2|HLA-A', 'ENST00000495183.5_1_6:29910330-29910808:+|nuORF'] 74486 21846 NKLILYKFDR True PC9_epitope_Rep6 1308.7554065772 1308.75376490379 96.932 3 -1.1094173718630478 0.3400703327279051 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 18316 11290 EITVTFNQFTK True NCI_RA007_Epitope_Rep2 1326.6819668534201 1326.68086993586 48.503 2 -1.1094526212596159 0.3400703327279051 1.0 ['ENSG00000010327|ENST00000321725|STAB1', 'STAB1|p.C740Mfs*9|1|0.15|ENSG00000010327|chr3:52508341-52508342|-/A|frameshift_variant', 'nc|ENSG00000010327|Q9NY15-2|STAB1', 'ENST00000481607.1_1_3:52529402-52542549:+|nuORF'] 64937 16819 LSCHCHSC True PC9_epitope_Rep5 888.3040635404002 888.30296993586 69.704 2 -1.1094917976580787 0.3400703327279051 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 125067 25982 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 107.54 3 -1.1095464939640927 0.3400788334707337 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 19647 13082 ELRSGGAEVL True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 55.344 2 -1.1095897389952543 0.3401002151147064 1.0 ['CARMIL1|p.Q472E|1|0.29|ENSG00000079691|chr6:25509674-25509674|C/G|missense_variant'] 136505 18822 YHKYYHYL True PC9_epitope_Rep3 1185.56072952193 1185.55909490379 77.622 3 -1.1095963272352856 0.340108715253626 1.0 ['ENSG00000182197|ENST00000378204|EXT1'] 68253 15609 LTRDRRHEVA True H1975_Epitope_Rep3 1251.67961586799 1251.6785099358601 65.456 2 -1.1096778689208435 0.3401246651555739 1.0 ['ENSG00000170689|ENST00000311177|HOXB9'] 78700 17990 PEEKVAVPVP True PC9_epitope_Rep1 1063.5913609438699 1063.59026993586 73.991 2 -1.1096990378546492 0.3401246651555739 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 61240 6703 LLDQHMLKVHY True H1975_Epitope_Rep1 1395.73329123363 1395.73218993586 30.829 2 -1.1097032756461165 0.3401246651555739 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A'] 21498 19525 ERQSAEVQGSL True PC9_epitope_Rep6 1202.5891290977397 1202.58802993586 87.766 2 -1.1097042977257643 0.3401246651555739 1.0 ['nc|ENSG00000099849|Q02833-3|RASSF7', 'nc|ENSG00000099849|Q02833-2|RASSF7', 'ENSG00000099849|ENST00000397583|RASSF7'] 138674 26202 YRSVLIRH True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 106.13 2 -1.109718063289839 0.3401246651555739 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 111265 7183 TLGSGRSSD True H1975_Epitope_Rep3 878.4093738306201 878.40826993586 32.604 2 -1.1097485651002619 0.3401246651555739 1.0 ['ENSG00000007047|ENST00000262891|MARK4', 'nc|ENSG00000007047|Q96L34-2|MARK4'] 99948 9462 SLIGSPAVKP True H1975_Epitope_Rep1 967.57023157647 967.56912993586 41.314 2 -1.1097677072195566 0.3401246651555739 1.0 ['ENST00000542726.1_1_12:118490142-118500196:-|nuORF'] 35722 7167 GTSRSWPWWWT True H1975_Epitope_Rep3 1448.6625688215197 1448.6614699358602 32.542 2 -1.1097849489258884 0.3401246651555739 1.0 ['ENST00000498040.5_1_21:45161634-45163661:+|nuORF'] 45034 5829 IQNERTYEVPD True H1975_Epitope_Rep2 1362.6415585934199 1362.6404699358602 27.412 2 -1.109815589400419 0.3401246651555739 1.0 ['nc|ENSG00000112782|Q9NZA1|CLIC5'] 62940 11799 LNDFFSRFWAQ True PC9_epitope_Rep5 1429.67788453249 1429.6762349037901 50.381 3 -1.1098332608357806 0.3401246651555739 1.0 ['ENSG00000178409|ENST00000369042|BEND3', 'BEND3|p.E692Rfs*21|1|0.12|ENSG00000178409|chr6:107069117-107069118|-/G|frameshift_variant'] 67064 14272 LTAVEKWNEKK True H1975_Epitope_Rep1 1344.7401504358797 1344.73904993586 60.081 2 -1.109842976854632 0.3401246651555739 1.0 ['ENSG00000164114|ENST00000311277|MAP9'] 16619 9007 EERYRYREYAE True NCI_RA007_Epitope_Rep4 1562.7113694887396 1562.7102699358602 41.477 2 -1.1098750855696837 0.3401246651555739 1.0 ['nc|ENSG00000145216|Q6UN15-3|FIP1L1', 'nc|ENSG00000145216|Q6UN15-5|FIP1L1', 'ENST00000513008.5_1_4:54292015-54325613:+|nuORF', 'ENSG00000145216|ENST00000337488|FIP1L1', 'ENST00000505125.5_1_4:54245288-54325613:+|nuORF'] 80921 22359 PMKRCFKR True NCI_RA007_Epitope_Rep4 1064.5735602184398 1064.57246993586 97.008 2 -1.1099084843280849 0.3401246651555739 1.0 ['ENST00000490602.5_1_13:37598533-37607608:-|nuORF', 'nc|ENSG00000102710|Q8NEM7-2|SUPT20H', 'ENSG00000102710|ENST00000350612|SUPT20H', 'nc|ENSG00000102710|Q8NEM7-3|SUPT20H'] 125707 8215 VNEEQPEAK True H1975_Epitope_Rep3 1042.4931034545798 1042.49200993586 36.582 2 -1.1099357340721234 0.3401246651555739 1.0 ['ENSG00000165164|ENST00000378653|CFAP47'] 57441 18256 LEIPFSFYYPW True PC9_epitope_Rep6 1460.70163966884 1460.7005499358602 82.863 2 -1.1100311751023464 0.34014166130070833 1.0 ['PILRA|p.V49L|1|0.11|ENSG00000085514|chr7:100374124-100374124|G/T|missense_variant'] 13172 16376 DLSYSMKDDLW True H1975_Epitope_Rep3 1371.6016679273898 1371.6005699358602 68.463 2 -1.110033631850947 0.34014166130070833 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 15174 3986 EAETITTH True NCI_RA007_Epitope_Rep2 900.4188758851601 900.41776993586 20.141 2 -1.1100463018812192 0.34015015904495755 1.0 ['ENSG00000100196|ENST00000216014|KDELR3', 'nc|ENSG00000100196|O43731-2|KDELR3', 'ENSG00000136240|ENST00000258739|KDELR2'] 81494 6247 PQPSSRAS True H1975_Epitope_Rep3 828.4089799078 828.40788993586 29.042 2 -1.1100854046377446 0.34016715387686247 1.0 ['ENST00000273146.6_1_3:43020947-43074030:+|nuORF', 'ENST00000488863.5_2_3:43020947-43095053:+|nuORF'] 98199 13892 SIDSVRQVI True PC9_epitope_Rep4 1015.5662088251898 1015.56510993586 61.337 2 -1.1101120850206487 0.34016715387686247 1.0 ['ENSG00000072415|ENST00000261681|PALS1', 'nc|ENSG00000072415|Q8N3R9-2|PALS1'] 57625 14676 LELRKNHL True PC9_epitope_Rep2 1021.6032630402501 1021.60216993586 61.716 2 -1.110239435305331 0.34033018260488834 1.0 ['ENST00000524575.5_2_11:101983367-101983394:+|nuORF'] 61680 19949 LLHSLELV True PC9_epitope_Rep3 922.5487678559 922.54766993586 81.977 2 -1.1102690488154412 0.34035101273483476 1.0 ['ENSG00000197272|ENST00000356897|IL27'] 30147 19268 FYRGEFRWLWR True H1975_Epitope_Rep3 1614.8208007984197 1614.8197099358601 80.787 2 -1.110286972102181 0.34035101273483476 1.0 ['nc|ENSG00000152620|Q4G0N4-3|NADK2', 'nc|ENSG00000152620|Q4G0N4-2|NADK2', 'ENSG00000152620|ENST00000381937|NADK2'] 14106 8667 DSDWEPEEREL True H1975_Epitope_Rep1 1403.58410328695 1403.5830099358602 38.267 2 -1.1103001395720578 0.34035101273483476 1.0 ['ENSG00000182768|ENST00000379095|NGRN', 'nc|ENSG00000182768|Q9NPE2-3|NGRN', 'ENST00000331497.3_1_15:90808929-90809136:+|nuORF'] 24234 4683 EYVTVKIRK True NCI_RA007_Epitope_Rep5 1134.6760936273397 1134.6744449037901 24.698 3 -1.11030033779253 0.34035101273483476 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27', 'SENP2-ANKRD27|1|fusion'] 84441 16540 QGKAGGPA True NCI_RA007_Epitope_Rep2 684.3554877829599 684.35493496793 69.065 1 -1.1103062823603622 0.34035101273483476 1.0 ['nc|ENSG00000173349|Q587I9|SFT2D3'] 15863 4333 EDLVKVLYLER True NCI_RA007_Epitope_Rep2 1375.7711162109897 1375.76947490379 21.493 3 -1.1103132871670272 0.34035101273483476 1.0 ['nc|ENSG00000101938|Q9BU40-3|CHRDL1', 'nc|ENSG00000101938|Q9BU40|CHRDL1', 'nc|ENSG00000101938|Q9BU40-5|CHRDL1', 'ENSG00000101938|ENST00000372042|CHRDL1'] 20256 20425 ENYGLLRR True PC9_epitope_Rep6 1019.5512274673899 1019.55067496793 91.268 1 -1.1103285113005288 0.34035101273483476 1.0 ['nc|ENSG00000125247|Q5T4D3-4|TMTC4', 'nc|ENSG00000125247|Q5T4D3|TMTC4', 'ENSG00000125247|ENST00000342624|TMTC4'] 68809 21037 LVDRRERPL True PC9_epitope_Rep3 1152.6727395824 1152.67108490379 86.197 3 -1.1103633905812407 0.34041073842786324 1.0 ['ENSG00000204217|ENST00000374580|BMPR2'] 120823 17539 VGDKKKRS True H1975_Epitope_Rep2 916.54541381096 916.54430993586 72.767 2 -1.1103838174245784 0.34041073842786324 1.0 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-4|PRDM2'] 13595 19382 DPRIAQKIKR True NCI_RA007_Epitope_Rep5 1223.74623887583 1223.7451499358601 81.439 2 -1.1103920885436596 0.34041073842786324 1.0 ['ENSG00000124177|ENST00000373233|CHD6', 'nc|ENSG00000124177|Q8TD26-3|CHD6', 'ENST00000373222.3_1_20:40125942-40126167:-|nuORF', 'ENST00000470470.1_1_20:40125942-40143569:-|nuORF'] 55282 12366 LARAKFIP True PC9_epitope_Rep1 914.5701720068199 914.5690699358599 52.424 2 -1.1104954438439167 0.34041073842786324 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3', 'nc|ENSG00000103472|A6NIE6|RRN3P2', 'ENST00000564580.5_1_16:29086353-29108616:+|nuORF', 'ENST00000551766.5_1_16:22437686-22447115:-|nuORF', 'ENST00000569045.1_1_16:22376319-22447115:-|nuORF'] 61773 9362 LLKHRFSP True H1975_Epitope_Rep3 996.5868847001199 996.58578993586 41.011 2 -1.1105218764103981 0.34041923106636107 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA', 'ENST00000360806.9_2_22:21827645-21842641:-|nuORF', 'nc|ENSG00000183506|A4QPH2|PI4KAP2', 'ENST00000477296.5_1_22:21827645-21830331:-|nuORF', 'ENST00000492581.5_1_22:21062337-21064665:-|nuORF', 'ENST00000486209.5_1_22:21827645-21829738:-|nuORF'] 75718 10810 NQVWEAADVLI True NCI_RA007_Epitope_Rep2 1256.6401020414398 1256.63900993586 46.651 2 -1.1105614573052995 0.3404663499298286 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 45639 5294 ISHQVSFSY True H1975_Epitope_Rep3 1066.5083595959 1066.5072699358602 25.442 2 -1.1106020262056298 0.34047018230507775 1.0 ['nc|ENSG00000115840|O75746-2|SLC25A12', 'ENSG00000115840|ENST00000422440|SLC25A12'] 108861 10234 TERKLPARPR True NCI_RA007_Epitope_Rep1 1222.7258377844198 1222.72474993586 43.819 2 -1.110622861587559 0.34047018230507775 1.0 ['ENST00000464242.1_1_3:128208704-128215621:+|nuORF'] 80846 11078 PLVAHVAS True PC9_epitope_Rep3 792.4493881678 792.44828993586 47.61 2 -1.110671122259937 0.34047018230507775 1.0 ['ENST00000393800.6_2_11:68382148-68382592:+|nuORF'] 56741 7839 LEALRAEHH True H1975_Epitope_Rep1 1074.55704112382 1074.55594993586 35.103 2 -1.1106953608177625 0.34047018230507775 1.0 ['nc|ENSG00000104892|Q6P597-2|KLC3', 'ENSG00000104892|ENST00000391946|KLC3', 'nc|ENSG00000104892|Q6P597-3|KLC3', 'ENST00000494686.1_1_19:45844037-45850131:+|nuORF'] 18372 11066 EIYPIVIHVE True H1975_Epitope_Rep3 1210.65977485686 1210.6586699358602 47.657 2 -1.11069612634962 0.34047018230507775 1.0 ['ENSG00000100065|ENST00000251973|CARD10', 'nc|ENSG00000100065|Q9BWT7-2|CARD10', 'ENST00000488141.5_1_22:37887199-37892645:-|nuORF'] 90491 10710 RKAAPRIEW True PC9_epitope_Rep5 1125.6407111781298 1125.63907490379 46.186 3 -1.1107262598113792 0.34050003862296263 1.0 ['ENST00000503849.5_1_5:175815432-175815552:-|nuORF'] 30368 8679 GAENRELK True NCI_RA007_Epitope_Rep2 915.4773938207899 915.47628993586 38.405 2 -1.1107437398121671 0.34050003862296263 1.0 ['ENST00000509092.5_1_4:55124935-55146696:+|nuORF', 'nc|ENSG00000134853|P16234-3|PDGFRA', 'ENSG00000134853|ENST00000257290|PDGFRA'] 69812 18200 LWVSEWGHWNR True PC9_epitope_Rep1 1468.7000169593998 1468.69890993586 74.796 2 -1.1107662986135864 0.340508529127776 1.0 ['ENST00000394893.5_1_7:75615553-75615796:+|nuORF'] 37397 3465 GVYLFTEAYYY True NCI_RA007_Epitope_Rep2 1387.63361967867 1387.63198490379 18.136 3 -1.1107923563072877 0.340517019413976 1.0 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 38216 7053 HEVHWETCRTV True PC9_epitope_Rep5 1395.6353680975099 1395.63373490379 32.098 3 -1.1108161938248033 0.3405255094815711 1.0 ['ENSG00000147869|ENST00000380911|CER1'] 106500 24341 SVVLIPFEDV True PC9_epitope_Rep5 1116.60667665484 1116.60556993586 98.663 2 -1.110878559364576 0.34053399933056977 1.0 ['ENST00000593682.1_1_19:12690915-12691281:-|nuORF'] 74269 7748 NIFMEYYRKFP True H1975_Epitope_Rep1 1506.7329568804598 1506.73132490379 34.762 3 -1.110897398823243 0.34054248896098044 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 122791 21385 VGVKRGHG True PC9_epitope_Rep1 808.4667695674398 808.46566993586 87.091 2 -1.1109386427232184 0.34055508354573777 1.0 ['NACA2|p.P17Rfs*105|1|0.25|ENSG00000253506|chr17:61591131-61591131|G/-|frameshift_variant'] 22472 4232 ETHIRVPA True PC9_epitope_Rep1 921.50321464581 921.50210993586 21.171 2 -1.11093992562255 0.34055508354573777 1.0 ['ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 60116 10443 LHVEVEPSV True NCI_RA007_Epitope_Rep5 1007.52876068731 1007.52766993586 46.8 2 -1.1109510891681107 0.34055508354573777 1.0 ['nc|ENSG00000167632|Q96Q05-3|TRAPPC9', 'ENSG00000167632|ENST00000438773|TRAPPC9', 'EIF2C2-TRAPPC9|3|fusion', 'nc|ENSG00000167632|Q96Q05-2|TRAPPC9', 'EIF2C2-TRAPPC9|4|fusion', 'ENST00000521667.5_1_8:140743306-141301208:-|nuORF', 'EIF2C2-TRAPPC9|2|fusion', 'EIF2C2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|3|fusion', 'PTK2-TRAPPC9|1|fusion', 'PTK2-TRAPPC9|2|fusion'] 72558 4303 MVKKLPPVLL True PC9_epitope_Rep1 1136.7355230797598 1136.7344299358601 21.442 2 -1.1110931391974577 0.3406177606177606 1.0 ['nc|ENSG00000125775|Q9H190-3|SDCBP2', 'ENSG00000125775|ENST00000360779|SDCBP2'] 47064 5810 IVTSSLLG True H1975_Epitope_Rep1 788.4643695256 788.46326993586 27.42 2 -1.1111430527386366 0.3406177606177606 1.0 ['ENST00000590402.1_1_17:66422197-66423441:-|nuORF'] 79333 22858 PGKREPLRSVL True PC9_epitope_Rep4 1250.7459045226599 1250.74480993586 96.146 2 -1.1111470100639498 0.3406177606177606 1.0 ['ENSG00000182170|ENST00000332314|MRGPRG'] 71654 13886 MLRYEEMTE True NCI_RA007_Epitope_Rep5 1200.51549577528 1200.51385490379 60.09 3 -1.1111710759375717 0.3406177606177606 1.0 ['ENSG00000087448|ENST00000381271|KLHL42'] 56251 10815 LDQARSSREL True H1975_Epitope_Rep1 1173.61019889549 1173.60910993586 46.563 2 -1.1111725743085585 0.3406177606177606 1.0 ['TRPC5|p.Q824Kfs*81|1|0.49|ENSG00000072315|chrX:111776765-111776765|G/-|frameshift_variant', 'ENSG00000072315|ENST00000262839|TRPC5'] 34052 16121 GNQRGHKQMEK True H1975_Epitope_Rep1 1311.6466014875498 1311.6455099358602 67.352 2 -1.1111757900208863 0.3406177606177606 1.0 ['nc|ENSG00000172954|Q6UWP7-2|LCLAT1'] 104378 8073 SSGERWIRY True H1975_Epitope_Rep3 1152.5676058075198 1152.56650993586 36.027 2 -1.111226956951876 0.3406177606177606 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 95742 14525 SCGFDAGD True NCI_RA007_Epitope_Rep5 770.25411905918 770.25357496793 62.546 1 -1.111233599927773 0.3406177606177606 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB', 'ENST00000552009.1_1_12:102159833-102159905:-|nuORF'] 20052 2285 ENDSGTVRRTR True PC9_epitope_Rep2 1289.6436242820898 1289.64196490379 12.882 3 -1.1112477055159542 0.3406177606177606 1.0 ['ENST00000607222.1_1_1:1550975-1551155:-|nuORF'] 123611 25621 VIKTVIALT True NCI_RA007_Epitope_Rep5 956.6270181765999 956.62646496793 106.09 1 -1.1112795485818776 0.3406177606177606 1.0 ['RABGAP1-TTLL11|1|fusion', 'RABGAP1-TTLL11|2|fusion', 'ENSG00000175764|ENST00000321582|TTLL11', 'ENST00000474723.5_1_9:124736354-124752043:-|nuORF', 'nc|ENSG00000175764|Q8NHH1-2|TTLL11'] 13029 9767 DLQSKAWPR True NCI_RA007_Epitope_Rep1 1099.57744221523 1099.5763499358602 41.994 2 -1.111292503283779 0.3406177606177606 1.0 ['nc|ENSG00000250305|Q9P272-3|TRMT9B', 'ENSG00000250305|ENST00000524591|TRMT9B'] 64350 13890 LQNRRLFQSLH True PC9_epitope_Rep6 1410.7844152896998 1410.7833099358602 65.265 2 -1.11129500333366 0.3406177606177606 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 108870 18268 TERLQHFQT True NCI_RA007_Epitope_Rep5 1158.5781704912197 1158.57652490379 77.073 3 -1.1113139282427305 0.3406177606177606 1.0 ['ENSG00000153823|ENST00000392055|PID1'] 76386 9055 NSLEKVVHFYD True H1975_Epitope_Rep1 1349.66156576201 1349.6604699358602 39.739 2 -1.1113219128407696 0.3406177606177606 1.0 ['ENSG00000174206|ENST00000398055|KICS2'] 25784 23662 FFVLFLFL True PC9_epitope_Rep2 1044.60482618004 1044.6037299358602 96.488 2 -1.1113633382282038 0.3406177606177606 1.0 ['chr6:52269226-52271383|101|11.51|0.38|4.94|-|0|TE_info:AluSp,AluSp_dup17300,Alu,SINE,donor,+,52271383,52271674|MCM3,None|1'] 81204 17886 PPLMLIIF True NCI_RA007_Epitope_Rep1 942.5612471159 942.56014993586 73.712 2 -1.1114145846288337 0.3406177606177606 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 39352 14195 HLTWDLLSL True PC9_epitope_Rep1 1096.59169529704 1096.5905899358602 59.423 2 -1.1114285831089872 0.3406177606177606 1.0 ['ENST00000457685.6_1_20:45141455-45141713:-|nuORF'] 66521 6484 LSSELAKER True NCI_RA007_Epitope_Rep1 1031.56112344475 1031.56002993586 29.241 2 -1.1114556273365868 0.3406177606177606 1.0 ['nc|ENSG00000172046|O94966|USP19', 'nc|ENSG00000172046|O94966-5|USP19', 'nc|ENSG00000172046|O94966-4|USP19', 'nc|ENSG00000172046|O94966-3|USP19', 'nc|ENSG00000172046|O94966-7|USP19', 'ENSG00000172046|ENST00000417901|USP19'] 82529 19291 PVFNQLIY True NCI_RA007_Epitope_Rep4 992.5331177917599 992.53256496793 83.418 1 -1.111486977546658 0.34064321840855566 1.0 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 63947 13437 LPYQRRYRERR True H1975_Epitope_Rep1 1591.88077528603 1591.8796699358602 56.799 2 -1.1114882550791372 0.34064321840855566 1.0 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'nc|ENSG00000179335|P49761-2|CLK3', 'ENST00000454830.6_1_15:74908152-74912599:+|nuORF'] 120841 6584 VGDNRVVL True PC9_epitope_Rep6 870.4923156089399 870.49120993586 34.03 2 -1.111489596330565 0.34064321840855566 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.P5041T|1|0.35|ENSG00000117983|chr11:1252884-1252884|C/A|missense_variant'] 57744 11895 LENPLQFFQ True NCI_RA007_Epitope_Rep3 1134.57095985246 1134.5698699358602 53.921 2 -1.1115347007165142 0.3406903119530526 1.0 ['PCDHB6|p.H495Afs*179|1|0.13|ENSG00000113211|chr5:141151738-141151739|-/G|frameshift_variant', 'ENSG00000113211|ENST00000231136|PCDHB6', 'ENSG00000112852|ENST00000194155|PCDHB2'] 4372 10456 AIQEYLKAK True PC9_epitope_Rep1 1062.60734536118 1062.6062499358602 45.106 2 -1.1115589986765024 0.34069879673122705 1.0 ['ENSG00000196422|ENST00000356818|PPP1R26', 'PPP1R26|p.A166Qfs*51|1|0.43|ENSG00000196422|chr9:135485004-135485004|C/-|frameshift_variant'] 140784 19295 YYRRRHRHERT True H1975_Epitope_Rep1 1628.85087214008 1628.8497699358602 80.389 2 -1.1116321035228123 0.34070728129102 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 46407 15354 ITKEKLHTI True PC9_epitope_Rep4 1081.6495445263301 1081.64844993586 66.991 2 -1.1116846074520452 0.34072863448595364 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 66342 6052 LSQRNSLP True PC9_epitope_Rep1 913.4981292653699 913.49702993586 28.092 2 -1.1117160789512135 0.3407499871313121 1.0 ['ENSG00000130997|ENST00000511885|POLN', 'ENST00000514858.5_1_4:2082849-2194957:-|nuORF', 'nc|ENSG00000130997|Q7Z5Q5-3|POLN', 'ENST00000515357.5_1_4:2158125-2230958:-|nuORF'] 45030 5293 IQLYESLAKE True NCI_RA007_Epitope_Rep5 1192.6339540318402 1192.6328499358601 27.054 2 -1.1117175343572014 0.34075847070480897 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 120735 7459 VGAVAGIVTGV True PC9_epitope_Rep2 941.55458151233 941.55348993586 34.065 2 -1.1117254162323493 0.34079269077338825 1.0 ['ENSG00000105352|ENST00000221954|CEACAM4', 'nc|ENSG00000170956|P40198-3|CEACAM3', 'ENST00000415495.5_1_19:42311603-42315272:+|nuORF', 'ENSG00000170956|ENST00000357396|CEACAM3'] 18139 21486 EINDIRIIGAI True PC9_epitope_Rep5 1225.7030366511701 1225.70192993586 87.68 2 -1.1117572819519221 0.34081404177014835 1.0 ['nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2'] 94591 13884 RYKHDHKRHEK True H1975_Epitope_Rep1 1532.8072759925997 1532.80616993586 58.554 2 -1.1118197648161137 0.3408438742552726 1.0 ['nc|ENSG00000205838|Q6PF05-3|TTC23L'] 113258 7365 TQEQRMFREN True NCI_RA007_Epitope_Rep2 1337.61463265293 1337.61352993586 33.272 2 -1.1118201501473972 0.3408438742552726 1.0 ['ENSG00000136870|ENST00000339664|ZNF189', 'nc|ENSG00000136870|O75820-3|ZNF189', 'nc|ENSG00000136870|O75820-4|ZNF189', 'nc|ENSG00000136870|O75820-2|ZNF189'] 95743 14648 SCGFDAGD True NCI_RA007_Epitope_Rep5 770.25411905918 770.25357496793 63.011 1 -1.1118264754287812 0.3408523560748385 1.0 ['ENSG00000111670|ENST00000299314|GNPTAB', 'ENST00000552009.1_1_12:102159833-102159905:-|nuORF'] 132659 3793 VYQNHVQHL True NCI_RA007_Epitope_Rep5 1136.57269118796 1136.5710449037902 20.769 3 -1.1118317945374456 0.3408608376761243 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5', 'nc|ENSG00000100852|Q13017-2|ARHGAP5', 'ARHGAP5|p.N943Ifs*2|1|0.39|ENSG00000100852|chr14:32093490-32093490|A/-|frameshift_variant', 'ARHGAP5|p.E1093Nfs*34|1|0.45|ENSG00000100852|chr14:32093945-32093945|G/-|frameshift_variant'] 81205 17976 PPLMLIIF True NCI_RA007_Epitope_Rep1 942.5612471159 942.56014993586 74.06 2 -1.1118582850037821 0.34088218642235835 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 78931 20400 PFEYETPEMEK True PC9_epitope_Rep1 1398.6013335742198 1398.6002299358602 83.282 2 -1.1119296870205593 0.34090324240864645 1.0 ['nc|ENSG00000163565|Q16666-3|IFI16', 'ENST00000493884.5_1_1:158984458-159022017:+|nuORF', 'nc|ENSG00000163565|Q16666-6|IFI16', 'nc|ENSG00000163565|Q16666-2|IFI16', 'ENSG00000163565|ENST00000295809|IFI16', 'nc|ENSG00000163565|Q16666-8|IFI16'] 45469 17558 ISEIQDSPQ True PC9_epitope_Rep5 1015.4822044177099 1015.48110993586 72.545 2 -1.1119644851556896 0.34090324240864645 1.0 ['ENSG00000187240|ENST00000375735|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-2|DYNC2H1', 'nc|ENSG00000187240|Q8NCM8-3|DYNC2H1'] 67180 9323 LTDGYQDLG True H1975_Epitope_Rep3 980.4450906329998 980.44398993586 40.858 2 -1.1119781737099887 0.34090324240864645 1.0 ['PTPRZ1|p.L2100Pfs*15|1|0.25|ENSG00000106278|chr7:122053952-122053953|-/T|frameshift_variant', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'nc|ENSG00000106278|P23471-3|PTPRZ1', 'PTPRZ1|p.N613Tfs*5|1|0.33|ENSG00000106278|chr7:122010881-122010881|A/-|frameshift_variant'] 48558 16209 KEGQEQLLRYQ True PC9_epitope_Rep4 1390.7204776204599 1390.7193899358601 70.292 2 -1.1119831999882301 0.34090324240864645 1.0 ['ENSG00000170927|ENST00000371117|PKHD1'] 66545 12162 LSSHPATLHH True H1975_Epitope_Rep1 1098.55704112382 1098.55594993586 51.799 2 -1.1120222351774913 0.34092458923585645 1.0 ['ENST00000433619.2_1_X:153740652-153741217:-|nuORF'] 59550 8476 LGRALEKTIAF True NCI_RA007_Epitope_Rep3 1217.7132074120498 1217.71156490379 40.417 3 -1.1120845937844845 0.3409582132564842 1.0 ['ENST00000586600.5_1_19:13842681-13842998:+|nuORF', 'ENST00000588071.5_1_19:13842681-13843075:+|nuORF'] 29932 26054 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 107.79 3 -1.1121019679288453 0.3409582132564842 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 78615 10248 PDSRIRVCLYF True H1975_Epitope_Rep1 1367.70199110535 1367.70088993586 44.363 2 -1.1121262304552506 0.3409582132564842 1.0 ['ENST00000517342.1_1_8:57389817-57390279:-|nuORF'] 68206 8174 LTQLEADEEL True PC9_epitope_Rep1 1159.5608486612298 1159.55920490379 36.273 3 -1.1121329122924957 0.3409582132564842 1.0 ['ENST00000468135.5_1_1:32542222-32557503:+|nuORF'] 125258 9418 VLRHLNLK True PC9_epitope_Rep2 991.62908386527 991.62798993586 41.566 2 -1.1121706419025272 0.3409582132564842 1.0 ['ENSG00000134061|ENST00000256447|CD180'] 67411 6420 LTEAKPTAA True NCI_RA007_Epitope_Rep3 900.4916469025999 900.49054993586 32.266 2 -1.1121710592504952 0.3409582132564842 1.0 ['ENST00000588549.1_1_17:76037159-76045021:+|nuORF'] 130523 25592 VTWKIKLR True PC9_epitope_Rep5 1042.6651350208197 1042.66402993586 103.75 2 -1.112179136550855 0.3409582132564842 1.0 ['ENSG00000256188|ENST00000539585|TAS2R30', 'ENSG00000212124|ENST00000390673|TAS2R19', 'ENSG00000255837|ENST00000538986|TAS2R20'] 66006 11510 LSMAELFDPL True PC9_epitope_Rep1 1134.5630975907 1134.56146490379 49.153 3 -1.1122980432295364 0.3410181528129784 1.0 ['ENST00000609281.1_1_7:105926092-105926272:+|nuORF'] 10148 3711 CCCCCCSC True PC9_epitope_Rep3 826.10688658094 826.10578993586 19.379 2 -1.1123198754274477 0.34102224337780296 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 83964 13268 QELLSRTSL True PC9_epitope_Rep3 1045.57677350889 1045.57566993586 56.071 2 -1.1123372752723937 0.34102224337780296 1.0 ['nc|ENSG00000110841|Q86W92-4|PPFIBP1', 'ENSG00000110841|ENST00000228425|PPFIBP1', 'nc|ENSG00000110841|Q86W92|PPFIBP1', 'nc|ENSG00000110841|Q86W92-3|PPFIBP1', 'ENST00000530189.1_1_11:7618841-7631707:+|nuORF', 'ENST00000532926.5_1_11:7598800-7674592:+|nuORF', 'nc|ENSG00000166387|Q8ND30-2|PPFIBP2', 'ENSG00000166387|ENST00000299492|PPFIBP2'] 66272 21900 LSQELESLKV True PC9_epitope_Rep2 1144.63395403184 1144.6328499358601 89.714 2 -1.1123618216554347 0.3410307209386096 1.0 ['nc|ENSG00000168386|Q4L180-6|FILIP1L', 'FILIP1L|p.L750Tfs*16|2|0.13|ENSG00000168386|chr3:99849428-99849429|-/T|frameshift_variant', 'nc|ENSG00000168386|Q4L180-5|FILIP1L', 'nc|ENSG00000168386|Q4L180-3|FILIP1L', 'nc|ENSG00000168386|Q4L180-7|FILIP1L', 'nc|ENSG00000168386|Q4L180-2|FILIP1L', 'nc|ENSG00000168386|Q4L180|FILIP1L', 'ENSG00000168386|ENST00000477258|FILIP1L'] 5710 4838 APARRLVFHG True PC9_epitope_Rep1 1122.6410455312998 1122.6399499358602 23.479 2 -1.1123875363086564 0.3410348110222039 1.0 ['GIPC2|p.A46G|1|0.21|ENSG00000137960|chr1:78046231-78046231|C/G|missense_variant'] 99416 6888 SLEEVKELLNK True NCI_RA007_Epitope_Rep5 1300.7238316654 1300.7227299358601 33.175 2 -1.1123947073457046 0.3410348110222039 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 22536 6927 ETLIQHHDWFF True H1975_Epitope_Rep3 1471.68844921619 1471.68679490379 31.605 3 -1.1124865474069556 0.34105994340108053 1.0 ['ENSG00000107863|ENST00000396432|ARHGAP21', 'ENST00000486374.5_1_10:24873343-24884978:-|nuORF', 'ENST00000482792.1_1_10:24880396-24883959:-|nuORF', 'ENST00000401578.2_1_6:80775088-80776231:-|nuORF'] 137062 6783 YLAEVAC[Carbamidomethyl]GDDR True H1975_Epitope_Rep1 1267.5503013403 1267.54920993586 31.134 2 -1.1124883611976046 0.34105994340108053 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ'] 71185 18024 MFKLILPV True NCI_RA007_Epitope_Rep1 959.5877962169099 959.58668993586 74.247 2 -1.1125672714298724 0.34105994340108053 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 125282 13159 VLRQFRFDP True NCI_RA007_Epitope_Rep1 1176.64037682496 1176.63926993586 55.181 2 -1.112691992897254 0.34105994340108053 1.0 ['nc|ENSG00000237541|P01909|HLA-DQA1'] 58134 6263 LESEKKAVI True NCI_RA007_Epitope_Rep3 1015.5913609438699 1015.59026993586 31.637 2 -1.1127064997119658 0.34105994340108053 1.0 ['PTPRZ1|p.L2100Pfs*15|1|0.25|ENSG00000106278|chr7:122053952-122053953|-/T|frameshift_variant', 'nc|ENSG00000106278|P23471-2|PTPRZ1', 'ENSG00000106278|ENST00000393386|PTPRZ1', 'nc|ENSG00000106278|P23471-3|PTPRZ1'] 104885 17820 STFCFHLRIF True PC9_epitope_Rep5 1269.63284891637 1269.6312149037901 73.563 3 -1.1127075095653578 0.34105994340108053 1.0 ['NCKAP1L|p.G924Dfs*20|1|0.23|ENSG00000123338|chr12:54531813-54531813|G/-|frameshift_variant', 'NCKAP1L|p.N982Ifs*2|1|0.16|ENSG00000123338|chr12:54535185-54535185|A/-|frameshift_variant', 'nc|ENSG00000123338|P55160-2|NCKAP1L', 'ENSG00000123338|ENST00000293373|NCKAP1L'] 31043 9313 GAVPTLHRVP True H1975_Epitope_Rep3 1045.60326304025 1045.60216993586 40.817 2 -1.1127235853921897 0.3410640323120064 1.0 ['ENSG00000129028|ENST00000249861|THAP10'] 23333 11036 EVTELLVKHGA True H1975_Epitope_Rep3 1194.66083748602 1194.6597499358602 47.539 2 -1.1127387091910914 0.3410640323120064 1.0 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2'] 137717 14590 YMVVYLVI True PC9_epitope_Rep3 998.5510763550197 998.54996993586 61.247 2 -1.112767037597783 0.3410678225526387 1.0 ['ENST00000602063.5_1_19:52495975-52496068:-|nuORF'] 18403 11312 EKEALKQEVM-[Oxidation] True H1975_Epitope_Rep1 1219.6118390687097 1219.6107499358602 48.489 2 -1.1127793608684404 0.3410678225526387 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 17095 20232 EGRKRWKRK True NCI_RA007_Epitope_Rep5 1242.7421565548996 1242.74050490379 84.763 3 -1.1128225257212214 0.3410678225526387 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 107687 8173 TAKRVTMGWP True H1975_Epitope_Rep2 1145.60154878809 1145.60044993586 36.389 2 -1.1128330828891384 0.3410678225526387 1.0 ['ENSG00000105428|ENST00000222033|ZNRF4'] 81206 18173 PPLMLIIF True NCI_RA007_Epitope_Rep1 942.5612471159 942.56014993586 74.833 2 -1.1128438608366416 0.3410678225526387 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 100821 4247 SLRVLRVLRPL True H1975_Epitope_Rep2 1320.8717737421198 1320.8701349037901 21.447 3 -1.1128580860666677 0.34107629778257964 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 16655 15637 EETFQQEHKRK True H1975_Epitope_Rep3 1458.7215402496197 1458.7204499358602 65.565 2 -1.1128925295223722 0.3410976346962662 1.0 ['ENST00000486155.1_1_6:35928714-35992326:-|nuORF', 'nc|ENSG00000112053|Q96RN1-4|SLC26A8', 'nc|ENSG00000112053|Q96RN1-2|SLC26A8', 'ENSG00000112053|ENST00000490799|SLC26A8'] 7755 7983 ASVDVDLLAP True H1975_Epitope_Rep3 998.5284263341399 998.5273299358599 35.676 2 -1.1129714768495376 0.34114469453376206 1.0 ['ENSG00000129951|ENST00000520876|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-2|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-3|PLPPR3'] 36981 21703 GVRPYQCYKSF True PC9_epitope_Rep4 1346.6441418760598 1346.64304993586 91.683 2 -1.1130583113260701 0.3411572543824676 1.0 ['ZBTB7C|p.E451_C453del|1|0.2|ENSG00000184828|chr18:48029761-48029769|GCAGAACTC/-|inframe_deletion'] 25943 15368 FGQRMLEKMGW True PC9_epitope_Rep4 1381.6634974216497 1381.6623899358601 67.046 2 -1.11308115648274 0.3411572543824676 1.0 ['nc|ENSG00000171056|Q9BT81-2|SOX7', 'nc|ENSG00000258724|Q96BK5-2|PINX1', 'ENST00000524026.1_1_8:10692103-10697380:-|nuORF', 'ENST00000520018.2_1_8:10691012-10697347:-|nuORF', 'ENSG00000254093|ENST00000314787|PINX1'] 68984 4840 LVGLREGFSGD True NCI_RA007_Epitope_Rep2 1148.5825871653199 1148.58094490379 23.449 3 -1.1130954432848692 0.3411572543824676 1.0 ['nc|ENSG00000186510|P51800-2|CLCNKA', 'nc|ENSG00000186510|P51800-3|CLCNKA', 'ENSG00000186510|ENST00000331433|CLCNKA'] 94336 8271 RWWKLWPAHLW True NCI_RA007_Epitope_Rep1 1577.84080796701 1577.8391549037901 36.171 3 -1.113156695530776 0.34116134010674554 1.0 ['ENST00000491838.5_1_21:42615402-42617991:+|nuORF'] 45818 15470 ISPLNSPVRP True PC9_epitope_Rep1 1078.61349337078 1078.6123899358602 64.326 2 -1.1131994893154489 0.34116134010674554 1.0 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 68218 17755 LTQMFFLH True PC9_epitope_Rep5 1035.52117320907 1035.5200699358602 73.314 2 -1.1132632678407257 0.3412124797448494 1.0 ['ENSG00000181616|ENST00000322653|OR52H1'] 107959 14030 TCCRSCAHVL True PC9_epitope_Rep5 1091.46744046739 1091.46634993586 58.983 2 -1.1132707873223315 0.3412124797448494 1.0 ['ENSG00000143382|ENST00000271643|ADAMTSL4', 'nc|ENSG00000143382|Q6UY14-3|ADAMTSL4', 'ENST00000489159.1_1_1:150530894-150532669:+|nuORF'] 120099 13284 VFICYWDGT True PC9_epitope_Rep2 1102.4793679667398 1102.47826993586 56.373 2 -1.1132843215712345 0.3412124797448494 1.0 ['TM6SF2|p.N139Ifs*12|1|0.13|ENSG00000213996|chr19:19269758-19269759|CG/T|frameshift_variant', 'nc|ENSG00000213996|Q9BZW4-2|TM6SF2', 'ENSG00000213996|ENST00000389363|TM6SF2'] 43127 12339 IGPETTKV True PC9_epitope_Rep1 843.4701831820299 843.46908993586 52.319 2 -1.113311300875847 0.34123381216322224 1.0 ['ENSG00000261272|ENST00000561890|MUC22'] 42178 18302 IEFVNYNK True PC9_epitope_Rep2 1025.51819600361 1025.5170899358602 75.726 2 -1.1133590301174319 0.3412422839506173 1.0 ['nc|ENSG00000101333|Q15147-2|PLCB4', 'ENST00000492632.5_1_20:9288449-9449247:+|nuORF', 'ENST00000464199.5_1_20:9351789-9459633:+|nuORF', 'nc|ENSG00000101333|Q15147|PLCB4', 'nc|ENSG00000101333|Q15147-5|PLCB4', 'nc|ENSG00000101333|Q15147-4|PLCB4', 'ENSG00000101333|ENST00000378473|PLCB4'] 81201 17609 PPLMLIIF True NCI_RA007_Epitope_Rep1 942.5612471159 942.56014993586 72.631 2 -1.1134302383255383 0.3412764753539692 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 71638 24541 MLQIHILLL True PC9_epitope_Rep4 1092.6729228232 1092.6718299358602 102.88 2 -1.113455446704519 0.3412805575916567 1.0 ['ENST00000264161.8_1_2:136664580-136664616:-|nuORF'] 105315 11299 STTVWEALPD True PC9_epitope_Rep5 1117.5291546101298 1117.52804993586 48.455 2 -1.1134584571036499 0.3412805575916567 1.0 ['nc|ENSG00000187642|Q5SV97-3|PERM1', 'ENSG00000187642|ENST00000433179|PERM1'] 128773 13710 VSQRRNTT True NCI_RA007_Epitope_Rep5 960.5100909314 960.50898993586 59.421 2 -1.1134769615443543 0.34130188776297515 1.0 ['ENSG00000105738|ENST00000222345|SIPA1L3'] 127556 12296 VQVQNIQSL True PC9_epitope_Rep2 1027.56620882519 1027.5651099358602 52.606 2 -1.1135811772346023 0.3413445464598925 1.0 ['ENSG00000105866|ENST00000222584|SP4'] 84654 12064 QHEESVVP True PC9_epitope_Rep5 923.4348603024698 923.43376993586 51.399 2 -1.1135979522986668 0.3413445464598925 1.0 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10', 'nc|ENSG00000170325|Q9NQV6-2|PRDM10', 'nc|ENSG00000170325|Q9NQV6-1|PRDM10', 'nc|ENSG00000170325|Q9NQV6-5|PRDM10'] 80922 23055 PMKRCFKR True NCI_RA007_Epitope_Rep5 1064.5735602184398 1064.57246993586 95.924 2 -1.113614957102053 0.3413486266844975 1.0 ['ENST00000490602.5_1_13:37598533-37607608:-|nuORF', 'nc|ENSG00000102710|Q8NEM7-2|SUPT20H', 'ENSG00000102710|ENST00000350612|SUPT20H', 'nc|ENSG00000102710|Q8NEM7-3|SUPT20H'] 78629 11724 PDVERLKE True PC9_epitope_Rep1 984.5240096600398 984.52290993586 49.972 2 -1.113665921752238 0.3413486266844975 1.0 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 78745 9386 PEGPRRRR True H1975_Epitope_Rep3 1022.5845932843399 1022.58348993586 41.103 2 -1.1136785851019708 0.3413570960151217 1.0 ['BARD1|p.S660R|2|0.3|ENSG00000138376|chr2:214730432-214730432|G/C|missense_variant'] 26351 24095 FIFVKVPWK True PC9_epitope_Rep2 1162.6902871394998 1162.6891899358602 98.182 2 -1.1137309384782503 0.34136556512794136 1.0 ['ENST00000336216.8_1_15:77713046-77713202:+|nuORF'] 9623 5547 AYFYLDCVWR True H1975_Epitope_Rep3 1334.6117791186198 1334.6106899358601 26.382 2 -1.1137862612447877 0.34136964460217045 1.0 ['ENSG00000235631|ENST00000434824|RNF148'] 66646 22657 LSSRRIEFYKE True PC9_epitope_Rep5 1426.75686312918 1426.7557699358601 92.151 2 -1.1138298401806492 0.34136964460217045 1.0 ['ARHGAP15-KYNU|1|fusion', 'ARHGAP15-KYNU|2|fusion', 'ENST00000552641.5_1_2:143913059-144194625:+|nuORF', 'ENSG00000075884|ENST00000295095|ARHGAP15'] 104586 13452 SSSSSSSS True PC9_epitope_Rep4 714.2667919178601 714.2662449679301 59.641 1 -1.113867718519666 0.34140382909235856 1.0 ['DIP2B|p.N772Kfs*4|1|0.24|ENSG00000066084|chr12:50699186-50699187|-/A|frameshift_variant', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'GLCCI1|p.Q349Pfs*79|1|0.27|ENSG00000106415|chr7:8070998-8070999|-/CC|frameshift_variant', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000158458|O14511-6|NRG2', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENSG00000070423|ENST00000292363|RNF126', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000196581|ENST00000378191|AJAP1', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000158458|O14511-2|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000173706|ENST00000311127|HEG1', 'ENSG00000150361|ENST00000377844|KLHL1', 'KMT2A|p.S90L|1|0.13|ENSG00000118058|chr11:118436781-118436781|C/T|missense_variant', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000185737|ENST00000372141|NRG3', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000102755|P17948-3|FLT1', 'ENSG00000170166|ENST00000306324|HOXD4', 'ZFC3H1|p.G70C|1|0.1|ENSG00000133858|chr12:71663403-71663403|C/A|missense_variant', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'SP4|p.G133R|2|0.76|ENSG00000105866|chr7:21429562-21429562|G/C|missense_variant', 'SALL1|p.G161S|1|0.17|ENSG00000103449|chr16:51141741-51141741|C/T|missense_variant', 'RLIM|p.S467Y|1|0.15|ENSG00000131263|chrX:74591915-74591915|G/T|missense_variant', 'ZC3H3|p.A872S|1|0.28|ENSG00000014164|chr8:143440242-143440242|C/A|missense_variant', 'chrX:152136080-152136871|180|19.49|0.03|9.2|-|ENST00000583480|MAGEA10,MAGEA10', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'PHLPP2|p.Y110Lfs*8|1|0.66|ENSG00000040199|chr16:71702687-71702688|-/A|frameshift_variant', 'chrX:152135834-152135990|168|18.08|0.03|9.41|-|ENST00000427322|MAGEA10,MAGEA10', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'ZFC3H1|p.I881Ffs*9|2|0.18|ENSG00000133858|chr12:71633308-71633308|T/-|frameshift_variant', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'GPHN-DCAF5|1|fusion', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ATXN7|p.K789Qfs*11|1|0.27|ENSG00000163635|chr3:63996184-63996185|-/T|frameshift_variant', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'ENSG00000144218|ENST00000672756|AFF3', 'nc|ENSG00000144218|P51826-2|AFF3', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'KCNMA1|p.E329Kfs*60|1|0.17|ENSG00000156113|chr10:77110319-77110319|C/-|frameshift_variant', 'ENSG00000168772|ENST00000394767|CXXC4', 'ENSG00000275023|ENST00000621332|MLLT6', 'MLLT6|p.K443Tfs*11|1|0.35|ENSG00000275023|chr17:38716658-38716665|AACGGATG/-|frameshift_variant', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'JCAD|p.A1030Qfs*35|1|0.16|ENSG00000165757|chr10:30027060-30027060|C/-|frameshift_variant', 'ENSG00000165757|ENST00000375377|JCAD', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000108312|ENST00000436088|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'PPIG-FAM117B|1|fusion', 'nc|ENSG00000138398|Q13427-2|PPIG', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000105722|P50548-2|ERF', 'PPIG|p.A682Gfs*2|1|0.15|ENSG00000138398|chr2:169637293-169637294|-/A|frameshift_variant', 'ENSG00000138398|ENST00000260970|PPIG', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|196|11.33|0.52|4.43|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENSG00000105866|ENST00000222584|SP4', 'ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000169291|ENST00000304760|SHE', 'ENSG00000116690|ENST00000445192|PRG4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'FAM133A|p.C102F|1|0.22|ENSG00000179083|chrX:93709724-93709724|G/T|missense_variant'] 22032 8315 ESQRMCELMKQ True NCI_RA007_Epitope_Rep1 1381.6152268998896 1381.61412993586 36.343 2 -1.1139120307652592 0.3414122971687196 1.0 ['ENSG00000084652|ENST00000373610|TXLNA'] 137541 22074 YLRHFNEL True PC9_epitope_Rep5 1090.55597849466 1090.55488993586 89.936 2 -1.1140553044334656 0.34146341463414637 1.0 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 118044 8008 VATHAGLYRKP True NCI_RA007_Epitope_Rep2 1211.6774906096698 1211.67638993586 35.779 2 -1.1140717034279395 0.34146341463414637 1.0 ['nc|ENSG00000039650|Q96T60-2|PNKP', 'ENST00000593946.5_1_19:50364507-50370327:-|nuORF', 'ENSG00000039650|ENST00000322344|PNKP', 'ENST00000593706.3_1_19:50365412-50367307:-|nuORF', 'ENST00000594661.5_1_19:50364507-50367546:-|nuORF'] 99396 8132 SLEDLHSLDSR True H1975_Epitope_Rep1 1270.6153438455801 1270.61424993586 36.218 2 -1.1141014839399492 0.34146341463414637 1.0 ['nc|ENSG00000083799|Q9NQC7-2|CYLD', 'ENSG00000083799|ENST00000427738|CYLD'] 52125 19197 KLSKPVYL True PC9_epitope_Rep1 946.5851533646198 946.58404993586 78.636 2 -1.114118543569717 0.34147188150890995 1.0 ['ENSG00000102897|ENST00000567954|LYRM1'] 87730 12448 QVEQLTEEQKN True NCI_RA007_Epitope_Rep1 1344.65212327712 1344.6510299358602 52.398 2 -1.1141709329374245 0.3414932051067769 1.0 ['KITLG-TNNC1|1|fusion'] 112338 5659 TMQNDRTTI True PC9_epitope_Rep4 1078.5077079729 1078.50660993586 28.569 2 -1.1142269627747756 0.34149728082693714 1.0 ['ENSG00000167110|ENST00000611957|GOLGA2', 'nc|ENSG00000167110|Q08379|GOLGA2', 'nc|ENSG00000167110|Q08379-2|GOLGA2'] 33688 8715 GLPRVRGSAGP True H1975_Epitope_Rep3 1065.60432566941 1065.60322993586 38.523 2 -1.1142465479203214 0.34149728082693714 1.0 ['ENST00000371317.9_1_X:119737922-119739264:+|nuORF'] 17012 7226 EGLHHQRPK True H1975_Epitope_Rep3 1100.583924578 1100.5828299358602 32.766 2 -1.114300098121726 0.34153553430011313 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 131476 25183 VVTVIIII True PC9_epitope_Rep2 868.5997407995999 868.59864993586 102.53 2 -1.114320767141736 0.34153553430011313 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 131477 24450 VVTVIIII True PC9_epitope_Rep4 868.5997407995999 868.59864993586 102.53 2 -1.1143284008799579 0.34153553430011313 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 66078 5676 LSNLGHPESPP True NCI_RA007_Epitope_Rep2 1146.56693710118 1146.5658499358601 26.693 2 -1.1143423641816748 0.34154399948576203 1.0 ['nc|ENSG00000145604|Q13309-2|SKP2', 'ENSG00000145604|ENST00000274255|SKP2'] 139878 5330 YVDPYELAS True PC9_epitope_Rep5 1055.4811417885498 1055.48004993586 25.514 2 -1.114359214643239 0.3415653202375749 1.0 ['ENSG00000163964|ENST00000392391|PIGX', 'nc|ENSG00000163964|Q8TBF5-2|PIGX'] 15808 13902 EDIFWPCTL True PC9_epitope_Rep3 1122.50558271458 1122.5044899358602 58.556 2 -1.114362153446877 0.34156939373682316 1.0 ['ENST00000441302.6_1_3:39139484-39139703:-|nuORF'] 117791 13802 VALVEDLQKQP True NCI_RA007_Epitope_Rep1 1238.6870522338597 1238.6859499358602 57.704 2 -1.1143736906689106 0.34156939373682316 1.0 ['ENSG00000085644|ENST00000396878|ZNF213', 'ENST00000574928.5_1_16:3185143-3187740:+|nuORF'] 45284 13083 ISAFRFVFQML True PC9_epitope_Rep2 1357.7216639207697 1357.72056993586 55.601 2 -1.1144069463080304 0.3415863221493765 1.0 ['SLC35G1|p.C105F|2|0.11|ENSG00000176273|chr10:93898706-93898706|G/T|missense_variant'] 72651 8169 MWNWMVSL True PC9_epitope_Rep4 1065.47759414493 1065.4764899358602 38.877 2 -1.1144129907759954 0.3415863221493765 1.0 ['ENST00000316543.14_1_12:125591673-125609365:+|nuORF', 'nc|ENSG00000081760|Q86V21-2|AACS', 'ENSG00000081760|ENST00000316519|AACS'] 119735 11913 VETITSEVIE True PC9_epitope_Rep1 1118.57068506894 1118.5695899358602 50.69 2 -1.114440980436028 0.34159478602923216 1.0 ['ENSG00000008405|ENST00000008527|CRY1'] 17946 20586 EIERDLRRSLP True H1975_Epitope_Rep2 1382.7630111387798 1382.7613649037899 85.277 3 -1.114539476598537 0.3416161044837515 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B'] 85902 8476 QNPQQATPAP True PC9_epitope_Rep3 1050.50942222506 1050.50832993586 37.564 2 -1.114564554853741 0.34162456776316635 1.0 ['ENSG00000161021|ENST00000292599|MAML1'] 120902 6987 VGEALAAP True NCI_RA007_Epitope_Rep4 726.3912045853399 726.39065496793 33.501 1 -1.1145976161309328 0.34163303082499935 1.0 ['ENST00000261402.6_1_12:106532525-106533446:-|nuORF'] 122222 10824 VGRPGKPG True NCI_RA007_Epitope_Rep5 766.4449714936999 766.4444249679301 48.267 1 -1.1146249641422297 0.3416371021646357 1.0 ['nc|ENSG00000084636|Q07092-2|COL16A1', 'ENSG00000084636|ENST00000373672|COL16A1'] 59273 7225 LGGSHLRVSFC True H1975_Epitope_Rep3 1174.59171238038 1174.5906099358601 32.763 2 -1.1146310959324577 0.3416371021646357 1.0 ['ENSG00000161847|ENST00000617231|RAVER1', 'nc|ENSG00000161847|Q8IY67-2|RAVER1', 'nc|ENSG00000161847|Q8IY67|RAVER1', 'ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 121151 5852 VGGGQKVR True PC9_epitope_Rep2 799.4664352142698 799.46532993586 27.908 2 -1.1147764434296237 0.3416577766924155 1.0 ['ENSG00000106397|ENST00000223127|PLOD3', 'ENST00000478082.5_1_7:100856177-100861250:-|nuORF'] 126758 7245 VPSGNYYNI True PC9_epitope_Rep5 1025.48181049489 1025.4807099358602 32.831 2 -1.1147822474136826 0.3416577766924155 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000513216.5_3_4:68338325-68358532:-|nuORF'] 34198 5868 GPHCPLPV True PC9_epitope_Rep3 818.4108944841 818.40978993586 27.637 2 -1.1148126740674487 0.3416577766924155 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 61447 9385 LLEWSDRP True H1975_Epitope_Rep3 1014.5134449763399 1014.51234993586 41.1 2 -1.1148161366241593 0.3416577766924155 1.0 ['nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'DOCK4|p.K1934Qfs*18|1|0.1|ENSG00000128512|chr7:111728375-111728376|-/G|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4'] 28497 6566 FSGDLDDQTC[Carbamidomethyl]R True NCI_RA007_Epitope_Rep2 1312.53537955215 1312.5342899358602 30.152 2 -1.1148443764065354 0.3416577766924155 1.0 ['ENSG00000138385|ENST00000260956|SSB', 'ENST00000470621.1_1_2:170665037-170666957:+|nuORF', 'ENST00000438469.2_1_1:146553889-146554591:-|nuORF'] 79983 12522 PIYAESTK True PC9_epitope_Rep6 907.46509780159 907.46400993586 59.6 2 -1.1148792969044543 0.3416577766924155 1.0 ['PRAG1|p.R902Kfs*70|1|0.16|ENSG00000275342|chr8:8328077-8328078|-/T|frameshift_variant', 'PRAG1|p.G1341Afs*17|1|0.31|ENSG00000275342|chr8:8318353-8318353|C/-|frameshift_variant', 'ENSG00000275342|ENST00000615670|PRAG1'] 12346 5253 DIWEYLFRQEM True H1975_Epitope_Rep1 1528.7020506749998 1528.70041490379 25.268 3 -1.114891176356346 0.3416577766924155 1.0 ['ENSG00000187003|ENST00000333999|ACTL7A'] 64344 15461 LQNRRLFQSLH True PC9_epitope_Rep2 1410.7844152896998 1410.7833099358602 64.748 2 -1.1149374178877662 0.341687552213868 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 1638 5407 AEFYSHEAI True PC9_epitope_Rep5 1065.47672511445 1065.47562993586 25.81 2 -1.1149390632585305 0.341687552213868 1.0 ['ENSG00000179477|ENST00000647874|ALOX12B'] 20811 5891 EQNWRQHREAY True H1975_Epitope_Rep1 1515.69672248411 1515.69562993586 27.729 2 -1.1149701587684728 0.34173457059866846 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 57094 10935 LEELNLPD True H1975_Epitope_Rep2 941.4705771048499 941.47002496793 47.094 1 -1.115023177602541 0.3417470986646789 1.0 ['nc|ENSG00000184220|Q9BQ75-2|CMSS1', 'ENSG00000184220|ENST00000421999|CMSS1', 'TBC1D23-C3orf26|2|fusion'] 74772 10631 NLLTRESL True PC9_epitope_Rep4 944.52909504048 944.52798993586 48.642 2 -1.1150372540521796 0.3417470986646789 1.0 ['ENST00000531925.5_1_19:1789538-1806275:-|nuORF', 'nc|ENSG00000130270|O60423-3|ATP8B3', 'ENSG00000130270|ENST00000310127|ATP8B3', 'nc|ENSG00000130270|O60423-1|ATP8B3'] 126745 8075 VPSEDTHSTRA True H1975_Epitope_Rep2 1198.5578289694602 1198.5567299358602 36.008 2 -1.1150591239578338 0.3417470986646789 1.0 ['ENST00000335312.7_1_19:3631143-3631773:-|nuORF'] 134167 25098 WRKVLLKG True NCI_RA007_Epitope_Rep1 998.6389202729798 998.6378299358599 103.87 2 -1.115072555355737 0.3417555584115152 1.0 ['ENST00000528279.1_2_12:123010803-123011480:-|nuORF'] 125079 24975 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 107.97 3 -1.1151325454571441 0.3417897212476385 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 43598 20184 IIHSGHFMV True PC9_epitope_Rep4 1039.52732121867 1039.52622993586 85.775 2 -1.115166455205941 0.34179378767044066 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-3|MLXIP'] 7655 20361 ASMKSLLTSR True PC9_epitope_Rep3 1092.59612905448 1092.59502993586 83.567 2 -1.1151853747154326 0.34179378767044066 1.0 ['ENSG00000135723|ENST00000258201|FHOD1', 'ENST00000569085.1_1_16:67263690-67264071:-|nuORF'] 63159 6231 LNSGSLRVPG True H1975_Epitope_Rep3 998.5508931142199 998.54978993586 28.981 2 -1.1152188647818955 0.3417978538842126 1.0 ['ENST00000397863.5_1_18:74728433-74728619:-|nuORF'] 139248 6959 YTCVVEHTGA True H1975_Epitope_Rep3 1078.4753452154598 1078.4742499358601 31.729 2 -1.1152400736896262 0.3417978538842126 1.0 ['ENST00000498020.1_1_6:32904922-32905177:-|nuORF', 'ENSG00000242574|ENST00000418107|HLA-DMB'] 24497 18126 FAIPPSFASI True PC9_epitope_Rep1 1048.5593325396 1048.55822993586 74.513 2 -1.1153007734931664 0.3418191631541071 1.0 ['nc|ENSG00000211899|P01871-1|IGHM', 'nc|ENSG00000211899|P01871|IGHM'] 67275 10703 LTDNIQDEFF True H1975_Epitope_Rep2 1240.5611830144 1240.56008993586 46.193 2 -1.1154280525994102 0.3418790238636802 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 81599 19367 PRLVGDLVP True PC9_epitope_Rep1 964.5705659296399 964.56946993586 79.302 2 -1.11553499783728 0.3419260325374592 1.0 ['ENST00000582874.1_1_17:37809793-37814734:+|nuORF'] 69427 17515 LVRLFRKENRR True NCI_RA007_Epitope_Rep5 1485.9004481014497 1485.89934993586 74.162 2 -1.1155584494371342 0.34193448900654083 1.0 ['ENST00000494664.5_1_3:119236092-119236149:+|nuORF'] 47163 21014 IWQNYRLFNLP True PC9_epitope_Rep1 1462.7721192704998 1462.77102993586 85.659 2 -1.1156297383634939 0.34194700727300764 1.0 ['AGMO|p.E102Q|1|0.22|ENSG00000187546|chr7:15544877-15544877|C/G|missense_variant'] 15621 12002 EAVRRLKSK True NCI_RA007_Epitope_Rep3 1085.66692592597 1085.66582993586 54.334 2 -1.1156352133455607 0.34194700727300764 1.0 ['ENSG00000064995|ENST00000361288|TAF11'] 82770 14772 PVRFGNIGFGI True PC9_epitope_Rep4 1175.6451278522297 1175.64402993586 64.753 2 -1.1156406067115872 0.34194700727300764 1.0 ['FNDC1|p.T1876I|1|0.34|ENSG00000164694|chr6:159271384-159271384|C/T|missense_variant'] 82225 16999 PTIISAPAAP True PC9_epitope_Rep1 936.5280324113198 936.52748496793 70.21 1 -1.1156812392164446 0.34196831270961026 1.0 ['SUGP1|p.P365S|1|0.3|ENSG00000105705|chr19:19297139-19297139|G/A|missense_variant'] 81936 18906 PSPPKAFAV True PC9_epitope_Rep4 912.5069030439199 912.50580993586 80.808 2 -1.1158135850409299 0.34198961759868424 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 118408 9680 VDLRHYSKQ True PC9_epitope_Rep3 1144.5989059357998 1144.5978099358601 42.182 2 -1.1158505157272098 0.3420146473082359 1.0 ['ENSG00000223501|ENST00000445902|VPS52', 'ENST00000464425.1_1_6:33236878-33239476:-|nuORF'] 62048 23277 LLLWLMIP True PC9_epitope_Rep1 997.6034462810499 997.60234993586 94.32 2 -1.1158612094419607 0.3420146473082359 1.0 ['ENST00000247833.11_2_12:70132798-70149222:+|nuORF'] 27256 23520 FLWKKKLRQ True NCI_RA007_Epitope_Rep5 1245.7709970716899 1245.7693649037901 97.783 3 -1.1158809068988023 0.3420146473082359 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000545213.5_1_14:24789074-24794639:-|nuORF', 'ENST00000557056.5_1_14:24787624-24791466:-|nuORF'] 40323 21198 HRRRWSHRHRP True PC9_epitope_Rep2 1579.8569605800299 1579.85586993586 86.996 2 -1.1158813937982355 0.3420146473082359 1.0 ['LCE1F|p.R84W|1|0.09|ENSG00000240386|chr1:152776621-152776621|A/T|missense_variant'] 124867 6353 VLLLLLLLLLL True NCI_RA007_Epitope_Rep1 1247.9196183679899 1247.91852993586 28.739 2 -1.1158969649677841 0.3420146473082359 1.0 ['PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF'] 121768 9623 VGMFVKLR True NCI_RA007_Epitope_Rep4 948.5578930709598 948.55678993586 43.864 2 -1.115915014438795 0.3420146473082359 1.0 ['ENST00000504327.1_1_3:98501668-98501887:+|nuORF'] 136479 7407 YHIALSGE True PC9_epitope_Rep4 888.43413202648 888.43302993586 35.838 2 -1.1159637484831322 0.34204879803677196 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 131475 24687 VVTVIIII True NCI_RA007_Epitope_Rep5 868.5997407995999 868.59864993586 102.44 2 -1.1159989624821565 0.3420572515160859 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 66264 11815 LSQDPQRILKP True NCI_RA007_Epitope_Rep2 1293.7404847890498 1293.7393899358601 50.557 2 -1.116063611618669 0.34206097357297943 1.0 ['ENSG00000176915|ENST00000357997|ANKLE2', 'nc|ENSG00000176915|Q86XL3-2|ANKLE2'] 62451 11779 LLSKLANT True H1975_Epitope_Rep3 858.51746772762 858.51636993586 50.452 2 -1.116086843662253 0.34206097357297943 1.0 ['nc|ENSG00000169126|Q5T2S8-2|ODAD2', 'ENSG00000169126|ENST00000305242|ODAD2'] 65944 26724 LSLLRPQKKLK True H1975_Epitope_Rep1 1322.87619041622 1322.8750899358602 111.28 2 -1.116099647483014 0.34206097357297943 1.0 ['ENST00000361203.7_2_6:56472809-56472863:-|nuORF'] 136182 11669 YGIWPPPAAP True PC9_epitope_Rep1 1067.5440168286298 1067.54290993586 49.762 2 -1.1161157616501571 0.34206097357297943 1.0 ['ENST00000585431.2_1_19:16022160-16022415:-|nuORF'] 106491 21001 SVVKQDRLLG True PC9_epitope_Rep6 1113.6506071554898 1113.6495099358601 93.605 2 -1.1161227902801154 0.34206097357297943 1.0 ['ENSG00000164951|ENST00000297598|PDP1', 'nc|ENSG00000164951|Q9P0J1-2|PDP1'] 123606 21489 VIKRANNTFY True PC9_epitope_Rep2 1224.6615061923599 1224.6604099358601 88.128 2 -1.1161634072911644 0.34206469515171756 1.0 ['ENSG00000165092|ENST00000297785|ALDH1A1'] 88593 26466 RALLKRRRPR True PC9_epitope_Rep2 1320.86908840352 1320.8674349037901 108.24 3 -1.1161682942382778 0.34206469515171756 1.0 ['nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4'] 1334 8994 AEEAWAQMEE True H1975_Epitope_Rep2 1192.4706537578397 1192.4695499358602 39.547 2 -1.1161794423996292 0.34206469515171756 1.0 ['ENSG00000103319|ENST00000263026|EEF2K'] 104361 12681 SSFLRRLYEEE True PC9_epitope_Rep5 1427.7044932031502 1427.70338993586 53.783 2 -1.1161795179261655 0.34206469515171756 1.0 ['ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386'] 73138 22670 NECILLFSDLP True PC9_epitope_Rep1 1262.62167509598 1262.6205699358602 92.004 2 -1.11619660506451 0.34206469515171756 1.0 ['ENST00000510927.5_1_4:106967729-107168455:-|nuORF', 'nc|ENSG00000145348|Q8TEA7-3|TBCK', 'nc|ENSG00000145348|Q8TEA7-2|TBCK', 'ENSG00000145348|ENST00000394708|TBCK'] 8823 13957 AVFPSIVG True NCI_RA007_Epitope_Rep3 788.4432401582 788.44214993586 62.215 2 -1.1162243183268141 0.3420731472322495 1.0 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 124667 24683 VLILILCLKV True NCI_RA007_Epitope_Rep5 1125.75592417117 1125.75537496793 102.43 1 -1.1162644390262089 0.34208531901501626 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 126646 10686 VPQPASPLMHI True NCI_RA007_Epitope_Rep4 1188.6325145632 1188.6314099358601 47.952 2 -1.1162815545932727 0.34208531901501626 1.0 ['nc|ENSG00000256263|A8MPP1|DDX11L8', 'nc|ENSG00000214826|Q92771|DDX12P', 'ENST00000539757.1_1_12:9440801-9462940:+|nuORF'] 42104 20218 IEELRVPSL True PC9_epitope_Rep1 1054.60225998074 1054.60116993586 82.599 2 -1.1162956723442161 0.34208531901501626 1.0 ['nc|ENSG00000149930|Q9UL54-3|TAOK2', 'ENSG00000149930|ENST00000308893|TAOK2'] 84214 19830 QETTWRIDTV True PC9_epitope_Rep1 1247.61461556959 1247.61350993586 81.09 2 -1.1163179461316661 0.34208531901501626 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 66391 12588 LSRDPLLL True PC9_epitope_Rep5 925.55966689277 925.55856993586 53.419 2 -1.1163206056094466 0.34208531901501626 1.0 ['ENSG00000124571|ENST00000265351|XPO5'] 58934 10706 LFVRLCLLR True PC9_epitope_Rep6 1131.6950552501098 1131.69340490379 51.991 3 -1.1163605179763936 0.34208531901501626 1.0 ['ENST00000296257.9_1_3:185347643-185347886:+|nuORF'] 42031 11139 IEDVREFLG True PC9_epitope_Rep5 1076.55022440788 1076.54912993586 47.831 2 -1.1164483671248258 0.34214075605965244 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27'] 138183 13058 YQQILHRNLVY True H1975_Epitope_Rep3 1445.77793292693 1445.7768299358602 55.467 2 -1.1164690934733164 0.34214075605965244 1.0 ['nc|ENSG00000184402|O75177-2|SS18L1', 'ENSG00000184402|ENST00000331758|SS18L1', 'nc|ENSG00000184402|O75177-5|SS18L1'] 109164 3219 TFQDEMVLPR True NCI_RA007_Epitope_Rep2 1234.60160835774 1234.59997490379 17.172 3 -1.1165078219549927 0.34217489595643014 1.0 ['ENSG00000187105|ENST00000553558|HEATR4'] 123372 4944 VIASSDLIWP True H1975_Epitope_Rep3 1099.59136094387 1099.59026993586 24.145 2 -1.1165703358700072 0.34220024404341404 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF'] 25189 11623 FDYREEFIYWI True PC9_epitope_Rep1 1579.7347307022699 1579.7330849037899 49.586 3 -1.1165750611129825 0.34220024404341404 1.0 ['ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.R3361Lfs*17|1|0.24|ENSG00000168702|chr2:140444655-140444656|-/A|frameshift_variant', 'LRP1B|p.P3359Qfs*54|1|0.29|ENSG00000168702|chr2:140444661-140444661|G/-|frameshift_variant', 'LRP1B|p.P3292Lfs*121|1|0.15|ENSG00000168702|chr2:140456543-140456543|G/-|frameshift_variant'] 111905 19961 TLRRRLKVY True NCI_RA007_Epitope_Rep5 1203.7564096367098 1203.75475490379 83.694 3 -1.1165792871765063 0.34220024404341404 1.0 ['ENSG00000198933|ENST00000578982|TBKBP1', 'nc|ENSG00000198933|A7MCY6-2|TBKBP1'] 112517 7545 TPAAFAGK True NCI_RA007_Epitope_Rep4 761.40718900265 761.40608993586 35.667 2 -1.1167522748099188 0.3422600698725853 1.0 ['ENSG00000134321|ENST00000382040|RSAD2'] 126658 8302 VPQVQMAV True PC9_epitope_Rep5 870.46332397978 870.46222993586 36.872 2 -1.116797157496075 0.34228136198415043 1.0 ['ENST00000462715.1_1_1:36602806-36603094:-|nuORF'] 112349 23435 TMSLLSKII True PC9_epitope_Rep5 1004.59400379616 1004.59290993586 95.125 2 -1.1168328860571397 0.3422847235600077 1.0 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 109452 7870 TGSSSLPHLKK True H1975_Epitope_Rep3 1153.64552177505 1153.6444299358602 35.248 2 -1.1168384669959055 0.3422847235600077 1.0 ['nc|ENSG00000168918|Q92835-2|INPP5D', 'ENSG00000168918|ENST00000445964|INPP5D', 'ENST00000496402.2_1_2:233990465-233995359:+|nuORF'] 56168 18349 LDNMLYMV True PC9_epitope_Rep5 997.4612753744499 997.46016993586 75.596 2 -1.1168609811780223 0.3422847235600077 1.0 ['ENSG00000187714|ENST00000374115|SLC18A3', 'SLC18A3|p.R351Lfs*98|1|0.21|ENSG00000187714|chr10:49611788-49611789|GC/-|frameshift_variant'] 116095 7123 TVSHQKGKPVP True NCI_RA007_Epitope_Rep2 1176.6615061923599 1176.6604099358601 32.328 2 -1.116869487951961 0.3422847235600077 1.0 ['ENSG00000188641|ENST00000370192|DPYD'] 45923 11136 ISRWFEVERRE True H1975_Epitope_Rep1 1505.77391017565 1505.77280993586 47.802 2 -1.1168779211647784 0.3422847235600077 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 139029 22334 YSHSDDGC True PC9_epitope_Rep6 882.28139643618 882.28028993586 98.88 2 -1.1168989275262426 0.3422847235600077 1.0 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 102440 10011 SPWLLWLYLWL True H1975_Epitope_Rep1 1488.8169442045998 1488.8158499358601 43.444 2 -1.1168994484734704 0.3422847235600077 1.0 ['ENST00000257940.6_1_12:56515445-56515574:+|nuORF'] 5973 19118 APKRATVARH True H1975_Epitope_Rep2 1105.64685918773 1105.64576993586 79.355 2 -1.1169200002062263 0.3422847235600077 1.0 ['ENST00000518563.5_3_8:42249167-42251383:+|nuORF'] 57258 10352 LEFWNFPPR True PC9_epitope_Rep1 1204.6029286870798 1204.60182993586 44.7 2 -1.1170126799376157 0.34229282512938397 1.0 ['ENST00000373109.6_1_10:73820245-73820362:-|nuORF'] 44171 9781 ILQQIFTSIML True NCI_RA007_Epitope_Rep1 1305.73664527857 1305.73554993586 42.048 2 -1.1170152567288516 0.34229282512938397 1.0 ['VWA8|p.T1900I|1|0.14|ENSG00000102763|chr13:41568216-41568216|G/A|missense_variant'] 120359 18908 VFRELITK True PC9_epitope_Rep2 1004.6018660579199 1004.60076993586 78.092 2 -1.1170213412868146 0.34229282512938397 1.0 ['ENST00000583454.1_1_17:73512940-73513526:+|nuORF'] 232 19237 AAGAPNLVLAA True PC9_epitope_Rep2 966.5498304850599 966.54928496793 79.369 1 -1.1170316406374439 0.34229282512938397 1.0 ['ENST00000474284.1_1_19:20188811-20235834:+|nuORF'] 58729 8632 LFLGVGSLG True NCI_RA007_Epitope_Rep3 861.4960040070499 861.49490993586 41.029 2 -1.117141574290103 0.34230971735305826 1.0 ['ENST00000395468.8_1_14:55534598-55534688:+|nuORF'] 115497 17888 TVGFPERISP True PC9_epitope_Rep2 1101.5818588893299 1101.5807699358602 74.109 2 -1.1171788838025507 0.34230971735305826 1.0 ['ENST00000530460.1_3_11:76092580-76092709:+|nuORF'] 114601 12860 TSLRPSPSL True PC9_epitope_Rep1 956.52909504048 956.52798993586 54.34 2 -1.1173418791466285 0.342373577830855 1.0 ['ENST00000285689.7_2_5:125758923-125759271:+|nuORF'] 98900 4735 SIWHTACA True PC9_epitope_Rep4 887.39597269595 887.39486993586 24.768 2 -1.1173810578872625 0.342373577830855 1.0 ['ENSG00000154646|ENST00000284885|TMPRSS15'] 78552 19822 PDNILNFVK True PC9_epitope_Rep2 1058.5760452329 1058.57494993586 81.635 2 -1.1173895438132688 0.342373577830855 1.0 ['ENSG00000168758|ENST00000305476|SEMA4C'] 140603 18174 YYMEHHGQL True PC9_epitope_Rep1 1176.50222866964 1176.50112993586 74.696 2 -1.1174193036275069 0.3424077046548957 1.0 ['nc|ENSG00000179295|Q06124-3|PTPN11', 'ENSG00000179295|ENST00000351677|PTPN11', 'nc|ENSG00000179295|Q06124-1|PTPN11'] 138047 9883 YQDPRGAAPPF True PC9_epitope_Rep1 1217.5829215184897 1217.58127490379 42.872 3 -1.1174316979565864 0.34241614874929377 1.0 ['RC3H1|p.P1010Tfs*14|1|0.12|ENSG00000135870|chr1:173943550-173943551|-/G|frameshift_variant', 'nc|ENSG00000135870|Q5TC82-2|RC3H1', 'ENSG00000135870|ENST00000367696|RC3H1'] 44661 21557 IPLIERLQRN True PC9_epitope_Rep6 1250.7459045226599 1250.74426490379 95.793 3 -1.1174486517963595 0.3424374333885486 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 24031 18406 EYQCQNLYQL True PC9_epitope_Rep1 1300.57578753272 1300.57468993586 75.589 2 -1.1174823745284306 0.34245396882463214 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'nc|ENSG00000080910|P36980-2|CFHR2', 'ENSG00000080910|ENST00000367415|CFHR2', 'ENSG00000244414|ENST00000320493|CFHR1', 'CFHR2|p.E185Q|1|0.39|ENSG00000080910|chr1:196958013-196958013|G/C|missense_variant'] 121124 9871 VGGFKQSV True PC9_epitope_Rep2 820.4443027873599 820.44320993586 43.304 2 -1.1174893166039892 0.34245396882463214 1.0 ['ENSG00000170745|ENST00000304101|KCNS3'] 21514 22913 ERRKLLMEHI True PC9_epitope_Rep3 1323.7445246236698 1323.74287490379 93.401 3 -1.1175719210861503 0.34245396882463214 1.0 ['ENSG00000120798|ENST00000333003|NR2C1', 'ENST00000552484.1_1_12:95422157-95422295:-|nuORF', 'ENST00000547594.5_1_12:95420624-95451409:-|nuORF'] 106601 10662 SWFWFRLYWFP True NCI_RA007_Epitope_Rep1 1633.7870410586497 1633.78540490379 45.462 3 -1.1176003735172224 0.34245396882463214 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 8611 5520 AVAITAGR True PC9_epitope_Rep3 757.44463714053 757.44354993586 26.314 2 -1.117619646767582 0.34245396882463214 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.R2720Qfs*63|1|0.51|ENSG00000168477|chr6:32061470-32061471|GC/-|frameshift_variant', 'TNXB|p.P3212Lfs*4|1|0.45|ENSG00000168477|chr6:32052891-32052891|G/-|frameshift_variant', 'TNXB|p.T3316Qfs*58|1|0.15|ENSG00000168477|chr6:32050233-32050233|C/-|frameshift_variant', 'TNXB|p.G3470Afs*51|1|0.22|ENSG00000168477|chr6:32049359-32049359|C/-|frameshift_variant'] 36329 14612 GVGWAAHP True PC9_epitope_Rep1 793.38712226441 793.38602993586 61.028 2 -1.1176597297387114 0.3424580144830774 1.0 ['ENST00000544949.5_1_12:6942900-6943209:+|nuORF', 'ENST00000538102.5_1_12:6939819-6943209:+|nuORF'] 112084 9764 TLTMIPMLR True PC9_epitope_Rep6 1074.5929582503397 1074.5918699358601 47.995 2 -1.1176675256094615 0.3424580144830774 1.0 ['ENST00000221448.9_1_19:49593578-49601899:+|nuORF'] 121073 13730 VGFVHYLRF True NCI_RA007_Epitope_Rep4 1136.6130994479597 1136.6120099358602 60.037 2 -1.1176868847784063 0.34247489921166835 1.0 ['nc|ENSG00000072858|Q9NXL6-2|SIDT1', 'ENSG00000072858|ENST00000264852|SIDT1', 'ENST00000488390.1_1_3:113303591-113320529:+|nuORF'] 65165 6769 LSDTIEVYQER True H1975_Epitope_Rep2 1351.6619596848298 1351.6603049037901 30.952 3 -1.1177173370680693 0.34247489921166835 1.0 ['ENSG00000175267|ENST00000389398|VWA3A', 'VWA3A|p.P1114Lfs*14|1|0.24|ENSG00000175267|chr16:22152568-22152568|C/-|frameshift_variant'] 123002 22407 VGWSLLCK True PC9_epitope_Rep4 904.4840594243599 904.4835149679301 94.42 1 -1.1177480344299298 0.34249916557549615 1.0 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.F1306Ifs*2|1|0.33|ENSG00000188906|chr12:40305920-40305932|AACTTTGATTTTA/-|frameshift_variant', 'LRRK2|p.L498Ffs*32|1|0.15|ENSG00000188906|chr12:40259552-40259553|-/T|frameshift_variant', 'ENST00000474202.1_1_12:40619397-40626186:+|nuORF'] 75084 1736 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 9.5428 3 -1.1177745543270268 0.34249916557549615 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 56114 22713 LDLRRPMRTVP True PC9_epitope_Rep5 1352.7710737246798 1352.7699699358602 92.37 2 -1.1178018671633516 0.34249916557549615 1.0 ['DMRTB1|p.L233Cfs*77|1|0.17|ENSG00000143006|chr1:53461588-53461588|C/-|frameshift_variant', 'ENSG00000143006|ENST00000371445|DMRTB1'] 116092 10113 TVSGQVSGVA True PC9_epitope_Rep4 903.4661604307499 903.46506993586 46.57 2 -1.1179466715550246 0.34249916557549615 1.0 ['ENST00000542605.1_1_12:6788557-6798678:-|nuORF'] 81895 12744 PSLLTFPQ True NCI_RA007_Epitope_Rep4 901.49091862661 901.49037496793 56.078 1 -1.117952021679922 0.34249916557549615 1.0 ['ENST00000561040.1_1_19:47919907-47920643:-|nuORF'] 9688 5619 AYHNLQGL True PC9_epitope_Rep6 914.4610154806599 914.45990993586 29.689 2 -1.1179791956725311 0.34249916557549615 1.0 ['ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 120509 8925 VFYGSALA True NCI_RA007_Epitope_Rep4 826.4225047136198 826.42140993586 41.165 2 -1.1180144947885013 0.34249916557549615 1.0 ['LAMC3|p.G849V|1|0.14|ENSG00000050555|chr9:131067158-131067158|G/T|missense_variant'] 136485 13350 YHIFFYIL True NCI_RA007_Epitope_Rep5 1114.5851533646198 1114.58404993586 58.037 2 -1.1180829977941995 0.34249916557549615 1.0 ['ENST00000477342.1_1_7:92116773-92118803:-|nuORF'] 67443 12231 LTEAQTREL True PC9_epitope_Rep6 1059.5560380643099 1059.5549499358601 58.42 2 -1.1180848593790151 0.34249916557549615 1.0 ['nc|ENSG00000021826|P31327-2|CPS1', 'ENSG00000021826|ENST00000233072|CPS1', 'nc|ENSG00000021826|P31327-3|CPS1'] 126943 16759 VPVKGTMET True PC9_epitope_Rep6 960.4950180308799 960.49392993586 76.956 2 -1.1180852537792125 0.34249916557549615 1.0 ['ENSG00000205108|ENST00000378788|FAM205A'] 22798 8842 EVDPNTQNPK True H1975_Epitope_Rep3 1140.54111627616 1140.54000993586 39.017 2 -1.1180916418351377 0.34249916557549615 1.0 ['ENSG00000197386|ENST00000355072|HTT'] 111150 18003 TLERWYVAP True PC9_epitope_Rep1 1133.58694426977 1133.58584993586 74.042 2 -1.1181289286872549 0.34249916557549615 1.0 ['ENSG00000136881|ENST00000259407|BAAT'] 99679 5158 SLGDFRTK True NCI_RA007_Epitope_Rep1 922.4872302285 922.48612993586 24.146 2 -1.1181478468894677 0.34254611740843915 1.0 ['ENSG00000143127|ENST00000369304|ITGA10', 'nc|ENSG00000143127|O75578-3|ITGA10', 'ITGA10|p.E480Gfs*10|2|0.21|ENSG00000143127|chr1:145901520-145901521|-/C|frameshift_variant'] 19562 10138 ELRAFLRHYEA True H1975_Epitope_Rep3 1403.73098273451 1403.72988993586 44.04 2 -1.1181672478344409 0.34255015981823084 1.0 ['ENSG00000184261|ENST00000327876|KCNK12'] 101434 1936 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 10.545 2 -1.118194869811777 0.34255015981823084 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 73183 9128 NEEFWQYN True H1975_Epitope_Rep2 1128.4512386426 1128.44959490379 40.063 3 -1.118243353642718 0.3425670384965919 1.0 ['ENSG00000135045|ENST00000376854|C9orf40'] 126520 19537 VPNNLLKLCFL True NCI_RA007_Epitope_Rep5 1272.72641494804 1272.7247549037902 82.036 3 -1.118255770384438 0.3425670384965919 1.0 ['ENST00000482712.1_1_1:40954849-40956549:+|nuORF'] 15253 7596 EAGLAPGELQ True H1975_Epitope_Rep2 983.49237517859 983.49182496793 34.171 1 -1.1182755766408983 0.34258831382214006 1.0 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF', 'ENST00000452600.1_1_2:130988892-130989183:+|nuORF'] 92161 6290 RQEFHKSPS True NCI_RA007_Epitope_Rep1 1114.5519557433797 1114.55084993586 28.496 2 -1.1183502256709705 0.34262646488762244 1.0 ['SALL1|p.T935R|1|0.43|ENSG00000103449|chr16:51139418-51139418|G/C|missense_variant'] 82834 9090 PVSTRVKL True PC9_epitope_Rep4 898.5600012459399 898.55890993586 42.551 2 -1.1183587703381102 0.34262646488762244 1.0 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 129351 21092 VTEAVLKFL True PC9_epitope_Rep5 1018.6062827320198 1018.60518993586 86.193 2 -1.11837084477411 0.34262646488762244 1.0 ['nc|ENSG00000138698|P52306-4|RAP1GDS1', 'ENSG00000138698|ENST00000408927|RAP1GDS1', 'nc|ENSG00000138698|P52306-5|RAP1GDS1', 'nc|ENSG00000138698|P52306-2|RAP1GDS1', 'nc|ENSG00000138698|P52306-3|RAP1GDS1', 'nc|ENSG00000138698|P52306-6|RAP1GDS1'] 15970 19961 EDVYTFKTP True PC9_epitope_Rep5 1098.5233409537 1098.5222499358601 81.833 2 -1.1184006196228455 0.34263050481972557 1.0 ['nc|ENSG00000033327|Q9UQC2-2|GAB2', 'ENSG00000033327|ENST00000361507|GAB2'] 65199 10864 LSDYEQLR True PC9_epitope_Rep1 1022.5032742154599 1022.50216993586 46.675 2 -1.118452313761573 0.34263050481972557 1.0 ['ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A'] 87784 21020 QVHRYRVNWWF True NCI_RA007_Epitope_Rep1 1589.8003997070098 1589.79930993586 86.018 2 -1.1185472195636514 0.34265177769220895 1.0 ['chr12:121950336-121951480|351|19.03|0.01|10.34|+|2|TE_info:L1MB5,L1MB5_dup6515,L1,LINE,donor,+,121949930,121950336|None,CFAP251|10', 'chr12:121950336-121954120|287|14.8|0.01|10.69|+|2|TE_info:L1MB5,L1MB5_dup6515,L1,LINE,donor,+,121949930,121950336|None,CFAP251|10'] 53161 7195 KSQGPYFSLTS True PC9_epitope_Rep5 1213.59790287629 1213.5962549037902 32.641 3 -1.1186463863468694 0.3426987203347409 1.0 ['NID2|p.E238Q|1|0.09|ENSG00000087303|chr14:52060179-52060179|C/G|missense_variant'] 87843 23699 QVKENRLRREK True PC9_epitope_Rep4 1454.8429927949799 1454.84134490379 99.512 3 -1.118717220230256 0.3427584967655817 1.0 ['ENSG00000163617|ENST00000295878|CCDC191', 'nc|ENSG00000163617|Q8NCU4-2|CCDC191', 'ENST00000460813.5_1_3:113723412-113755878:-|nuORF'] 137909 16088 YPPGPAEV True PC9_epitope_Rep6 828.40176926904 828.40066993586 74.214 2 -1.1188078785951865 0.34277976717620934 1.0 ['ENST00000471073.1_1_22:21354171-21355180:-|nuORF', 'ENSG00000184436|ENST00000215742|THAP7'] 13360 4703 DNDGSTALSIA True NCI_RA007_Epitope_Rep3 1062.4829326937 1062.48182993586 25.444 2 -1.118827847639186 0.34278820237697977 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'nc|ENSG00000107104|Q14678-2|KANK1'] 133670 25521 WKVGVTAL True PC9_epitope_Rep2 872.51198842436 872.5114349679301 103.85 1 -1.1189069268934142 0.34284357513219366 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 127825 5118 VRLLLLLLLL True NCI_RA007_Epitope_Rep1 1177.85260143733 1177.8515099358601 23.993 2 -1.118946592998378 0.34284357513219366 1.0 ['ENSG00000142538|ENST00000270631|PTH2'] 59153 11903 LGETRQKL True PC9_epitope_Rep5 943.5450794577899 943.5439899358599 50.781 2 -1.1189692814694938 0.3428861110398111 1.0 ['ENSG00000196684|ENST00000613986|HSH2D', 'nc|ENSG00000196684|Q96JZ2-2|HSH2D'] 79409 5814 PGMFKEVYQK True NCI_RA007_Epitope_Rep2 1225.6165301458898 1225.6154299358602 27.233 2 -1.1189972897441154 0.3428861110398111 1.0 ['ENSG00000122729|ENST00000309951|ACO1'] 64241 8057 LQKQKKQL True NCI_RA007_Epitope_Rep4 1012.6393141957999 1012.63820993586 37.766 2 -1.1190553056204036 0.34290700957367626 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 28143 18584 FRKKKREQ True NCI_RA007_Epitope_Rep5 1118.6672602791398 1118.6661699358601 78.302 2 -1.119130304496755 0.34290700957367626 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 40602 6530 HTDQLTGVLGS True NCI_RA007_Epitope_Rep2 1126.56185172074 1126.56074993586 30.012 2 -1.1191609326611267 0.34290700957367626 1.0 ['ENST00000471308.5_1_3:51992122-51994256:-|nuORF'] 77924 4755 PAIIQNGYSD True H1975_Epitope_Rep3 1076.51383889916 1076.51274993586 23.416 2 -1.1192353682830833 0.34290700957367626 1.0 ['ENST00000352433.9_1_5:159848878-159849339:+|nuORF'] 112278 14495 TLYSPMSQKI True PC9_epitope_Rep5 1166.6005457285798 1166.5988849037901 60.755 3 -1.119245006023808 0.3429154421672677 1.0 ['nc|ENSG850|P63123|ERVK-18_pro'] 22320 9696 ETEENDKGPV True H1975_Epitope_Rep2 1116.4934973773998 1116.49240993586 42.278 2 -1.119288480626766 0.34291873580475035 1.0 ['ENST00000596690.1_2_19:52403157-52403544:-|nuORF'] 65099 20173 LSDNDRSLLE True PC9_epitope_Rep4 1160.567331024 1160.56622993586 85.732 2 -1.1193069458398326 0.34291873580475035 1.0 ['ENSG00000166484|ENST00000395604|MAPK7', 'nc|ENSG00000166484|Q13164-2|MAPK7', 'ENST00000570306.5_1_17:19284999-19286541:+|nuORF'] 11073 13486 DDVHWKENGTL True PC9_epitope_Rep4 1312.6047791618798 1312.60368993586 59.77 2 -1.1193087923333522 0.34291873580475035 1.0 ['ENSG00000102805|ENST00000377453|CLN5'] 19181 15574 ELKHEIHVWR True PC9_epitope_Rep1 1345.72550343125 1345.7244099358602 64.729 2 -1.1193184004305434 0.34291873580475035 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2'] 120474 11888 VFVLPFPV True NCI_RA007_Epitope_Rep5 916.5422259234799 916.54112993586 52.383 2 -1.1193196220023018 0.34291873580475035 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 28253 4301 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 21.881 2 -1.1193196596590227 0.34291873580475035 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 108671 6873 TELKGKGAE True NCI_RA007_Epitope_Rep5 931.4974605590298 931.49636993586 33.118 2 -1.1193235963975985 0.34291873580475035 1.0 ['ENSG00000132518|ENST00000254854|GUCY2D'] 137548 14798 YLRNGWNVL True PC9_epitope_Rep3 1133.5981776598098 1133.5970899358601 62.056 2 -1.1193249213768588 0.34291873580475035 1.0 ['CACNA1B|p.M169L|1|0.11|ENSG00000148408|chr9:137882858-137882858|A/C|missense_variant'] 25761 14213 FFRLLSRRLMF True PC9_epitope_Rep4 1484.8438447421197 1484.8427499358602 62.579 2 -1.1193443399034442 0.34292276699215996 1.0 ['ENST00000523151.5_1_8:130364907-130382560:-|nuORF'] 59489 4960 LGPFTFFDVQK True H1975_Epitope_Rep3 1297.6706738937298 1297.6695699358602 24.206 2 -1.119383360024497 0.34292276699215996 1.0 ['nc|ENSG00000109066|Q8NE00-2|TMEM104', 'ENSG00000109066|ENST00000335464|TMEM104'] 135163 24483 YARYRRTW True PC9_epitope_Rep4 1170.6046600225798 1170.60301490379 102.66 3 -1.1194209329489073 0.3429267979726695 1.0 ['RASGRP4|p.L355Sfs*25|1|0.33|ENSG00000171777|chr19:38415015-38415015|G/-|frameshift_variant', 'nc|ENSG00000171777|Q8TDF6-7|RASGRP4', 'nc|ENSG00000171777|Q8TDF6-8|RASGRP4', 'ENST00000592322.5_1_19:38901850-38916815:-|nuORF', 'nc|ENSG00000171777|Q8TDF6-2|RASGRP4', 'ENSG00000171777|ENST00000615439|RASGRP4'] 87537 10446 QTINGQLLQT True PC9_epitope_Rep6 1114.5982372294598 1114.5971499358602 50.933 2 -1.1194654574051144 0.3429267979726695 1.0 ['ENSG00000112624|ENST00000314073|BICRAL'] 25679 19396 FFFFFFFFKQF True PC9_epitope_Rep2 1597.7798304198893 1597.77817490379 79.985 3 -1.119490211370854 0.34293522890576883 1.0 ['ENST00000468830.1_1_7:131163282-131172484:+|nuORF'] 42094 12892 IEEKGVRLR True PC9_epitope_Rep5 1098.6509415086598 1098.6498499358602 54.599 2 -1.11950622444962 0.3429476898600187 1.0 ['ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-5|SEPTIN4', 'nc|ENSG00000108387|O43236-2|SEPTIN4', 'nc|ENSG00000108387|O43236-3|SEPTIN4', 'nc|ENSG00000108387|O43236|SEPTIN4', 'nc|ENSG00000108387|O43236-4|SEPTIN4', 'ENST00000577440.5_1_17:56598198-56609324:-|nuORF', 'ENST00000584488.5_1_17:56598198-56606616:-|nuORF', 'ENST00000585170.1_1_17:56602431-56602611:-|nuORF', 'nc|ENSG00000108387|O43236-6|SEPTIN4'] 120769 14456 VGCCSSSA True NCI_RA007_Epitope_Rep5 712.2520108842 712.25146496793 62.287 1 -1.1195178937577819 0.3429476898600187 1.0 ['SLC6A17|p.L509Cfs*48|1|0.4|ENSG00000197106|chr1:110195614-110195614|G/-|frameshift_variant'] 76134 24606 NRPYLRTPRH True NCI_RA007_Epitope_Rep5 1308.71633572988 1308.7152299358602 102.12 2 -1.1195302149643005 0.3429476898600187 1.0 ['ENSG00000001629|ENST00000265742|ANKIB1', 'ENST00000422095.1_3_7:92000906-92025787:+|nuORF'] 39561 14183 HPHLQEAGRAV True PC9_epitope_Rep1 1213.63160304641 1213.62994490379 59.377 3 -1.119602531759947 0.34298178085706954 1.0 ['ENST00000539253.5_1_1:205306132-205306279:-|nuORF'] 1311 6567 AEDYRWWWRNF True H1975_Epitope_Rep1 1627.7320453636696 1627.73094993586 30.318 2 -1.1196450115649565 0.3430323557334565 1.0 ['ENSG00000101337|ENST00000398022|TM9SF4'] 74094 21891 NHVLPLKRLIL True NCI_RA007_Epitope_Rep5 1314.84997566838 1314.84832490379 91.33 3 -1.1196491534852921 0.3430323557334565 1.0 ['nc|ENSG00000121440|Q9UPQ7-3|PDZRN3', 'PDZRN3|p.H870Afs*142|1|0.12|ENSG00000121440|chr3:73383959-73383960|-/T|frameshift_variant', 'ENSG00000121440|ENST00000263666|PDZRN3', 'nc|ENSG00000121440|Q9UPQ7-2|PDZRN3'] 15823 18458 EDKKQKKK True H1975_Epitope_Rep1 1030.6134933707797 1030.6123899358602 76.944 2 -1.1196693016223667 0.3430323557334565 1.0 ['ENSG00000100852|ENST00000345122|ARHGAP5'] 123833 25568 VIVLSVTTESK True PC9_epitope_Rep1 1174.68090422426 1174.67980993586 103.36 2 -1.1196744173382476 0.3430323557334565 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF'] 5246 9722 ALQLHADV True PC9_epitope_Rep5 865.46576650793 865.46466993586 42.364 2 -1.1197464331304996 0.3430323557334565 1.0 ['ENSG00000197070|ENST00000371421|ARRDC1', 'ENST00000491911.5_1_9:140508423-140509541:+|nuORF'] 112435 20154 TNLRQLTKTSR True NCI_RA007_Epitope_Rep1 1316.75244645508 1316.7513499358602 82.603 2 -1.119746979116245 0.3430323557334565 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 130377 13945 VTVGGFIF True NCI_RA007_Epitope_Rep3 838.45889022234 838.4583449679301 62.163 1 -1.1197802052790478 0.3430576402519596 1.0 ['nc|ENSG00000149177|Q12913-3|PTPRJ', 'ENSG00000149177|ENST00000418331|PTPRJ', 'ENST00000527026.1_1_11:48166660-48171041:+|nuORF'] 64932 16396 LSCHCHSC True PC9_epitope_Rep4 888.3040635404002 888.30296993586 71.028 2 -1.1197834963106783 0.3430576402519596 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 67071 10245 LTCGVGLQTR True H1975_Epitope_Rep2 1046.5542642425 1046.55316993586 44.413 2 -1.1197881455746157 0.3430576402519596 1.0 ['ENSG00000178031|ENST00000380548|ADAMTSL1', 'ENST00000380559.7_1_9:18706652-18908543:+|nuORF'] 12885 21859 DLLPLSLIPV True PC9_epitope_Rep6 1078.66379760814 1078.6627099358602 96.982 2 -1.1198789216922664 0.34306166694461904 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2', 'PAN2|p.R449Qfs*16|1|0.09|ENSG00000135473|chr12:56326327-56326328|-/G|frameshift_variant'] 96805 5883 SESDRASLPV True H1975_Epitope_Rep3 1059.51965255559 1059.5185499358602 27.638 2 -1.1198818742251755 0.34306166694461904 1.0 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000589215.5_1_18:21087981-21111645:+|nuORF'] 95099 4162 RYTKLPRRVAE True NCI_RA007_Epitope_Rep2 1387.8048163811097 1387.80316490379 20.829 3 -1.1199403924402958 0.3431085796387521 1.0 ['ENSG00000164961|ENST00000318410|WASHC5', 'ENST00000519042.2_1_8:126036861-126044688:-|nuORF'] 89968 1117 RGAGSKRKRR True NCI_RA007_Epitope_Rep2 1170.71700443622 1170.71536490379 6.1031 3 -1.1200569314050386 0.34314266288661116 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 57726 14663 LENLRFHV True PC9_epitope_Rep2 1026.5610638750998 1026.5599699358602 61.668 2 -1.1200825410954454 0.34315108910383046 1.0 ['ENSG00000102144|ENST00000373316|PGK1', 'nc|ENSG00000102144|P00558-2|PGK1', 'ENSG00000170950|ENST00000304801|PGK2'] 35866 15515 GVACLYGRL True PC9_epitope_Rep5 950.5007721176598 950.49966993586 64.688 2 -1.1200985905316623 0.3431595151048682 1.0 ['ENST00000407450.1_1_6:118774123-118774444:-|nuORF'] 89772 5019 RFEDCTSPET True H1975_Epitope_Rep2 1183.4815527947098 1183.4804499358602 24.389 2 -1.1201783768075746 0.34318076863871927 1.0 ['ENSG00000067596|ENST00000262415|DHX8', 'ENST00000587044.1_1_17:41568567-41594747:+|nuORF'] 57060 7690 LEEIAFSTYIP True NCI_RA007_Epitope_Rep2 1281.64926974281 1281.64816993586 34.538 2 -1.1202193562214668 0.3431891940428698 1.0 ['nc|ENSG00000152670|Q9NQI0-3|DDX4', 'nc|ENSG00000152670|Q9NQI0-2|DDX4', 'nc|ENSG00000152670|Q9NQI0-4|DDX4', 'ENSG00000152670|ENST00000505374|DDX4'] 20738 8892 EQLEKYHKQHK True H1975_Epitope_Rep1 1466.76301113878 1466.76190993586 39.11 2 -1.1202765682352724 0.3432316987134263 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6', 'nc|ENSG00000115423|Q9C0G6-3|DNAH6', 'ENST00000476689.5_1_2:84775422-84811380:+|nuORF'] 12863 7566 DLLGDPDNY True H1975_Epitope_Rep3 1020.44000525256 1020.43890993586 34.083 2 -1.1202797262657607 0.3432316987134263 1.0 ['ENSG00000198727|ENST00000361789|MT-CYB'] 28252 4212 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 21.527 2 -1.1203095680389148 0.34324012314007185 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 106404 12745 SVTFNLAHL True PC9_epitope_Rep5 1000.5341804209199 1000.53308993586 54.03 2 -1.1204330240165834 0.3432742012031657 1.0 ['ENST00000496342.1_1_22:29656732-29660364:-|nuORF'] 24433 20875 FAGKVKYQIK True PC9_epitope_Rep1 1180.6968290719199 1180.69572993586 85.12 2 -1.1205035131145527 0.3432954516302814 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 121045 14921 VGFLLRPYNF True NCI_RA007_Epitope_Rep5 1224.6655289436396 1224.6644299358602 64.061 2 -1.1205171955039033 0.3433038749150238 1.0 ['nc|ENSG00000131480|O75106-2|AOC2', 'ENSG00000131480|ENST00000253799|AOC2'] 66868 14713 LSWEYLSGG True PC9_epitope_Rep5 1010.4709114580198 1010.46980993586 61.592 2 -1.1205434385705992 0.3433078945680754 1.0 ['nc|ENSG00000101180|Q9Y5N1-3|HRH3', 'nc|ENSG00000101180|Q9Y5N1-7|HRH3', 'nc|ENSG00000101180|Q9Y5N1-4|HRH3', 'ENSG00000101180|ENST00000340177|HRH3', 'nc|ENSG00000101180|Q9Y5N1-2|HRH3', 'nc|ENSG00000101180|Q9Y5N1-5|HRH3', 'nc|ENSG00000101180|Q9Y5N1-6|HRH3'] 64913 16749 LSCHCHSC True PC9_epitope_Rep1 888.3040635404002 888.30296993586 69.252 2 -1.1205916645076517 0.3433078945680754 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 109324 14974 TGGGGGGD True PC9_epitope_Rep6 576.21396849936 576.2134249679301 69.608 1 -1.1206528913193983 0.3433243555213544 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 56942 4502 LEDSYDYDDRL True H1975_Epitope_Rep3 1402.5888543142198 1402.58774993586 22.437 2 -1.1206793731454752 0.3433243555213544 1.0 ['ENSG00000141040|ENST00000395825|ZNF287'] 91176 10891 RLPTPEQI True PC9_epitope_Rep3 952.5341804209199 952.53308993586 46.875 2 -1.120687275518362 0.3433243555213544 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 46640 10235 ITTYEEYQAQR True NCI_RA007_Epitope_Rep2 1400.65720865756 1400.65610993586 44.402 2 -1.1207143873165446 0.3433243555213544 1.0 ['nc|ENSG00000188611|Q9NR71-2|ASAH2', 'ENSG00000188611|ENST00000682911|ASAH2'] 79651 13021 PHGWGGLS True H1975_Epitope_Rep3 809.3820368839699 809.3814849679301 55.322 1 -1.1207263751692573 0.3433243555213544 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614', 'nc|ENSG00000135835|Q5VZ46-2|KIAA1614'] 61569 19486 LLGNRRPPGP True PC9_epitope_Rep2 1075.62506111399 1075.62396993586 80.335 2 -1.1207739323254469 0.34336244597488874 1.0 ['COL24A1|p.G795R|1|0.2|ENSG00000171502|chr1:85971375-85971375|C/T|missense_variant'] 111236 8532 TLGIKLELK True NCI_RA007_Epitope_Rep4 1013.6484818971699 1013.64738993586 39.611 2 -1.1207880125742498 0.34336244597488874 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 31599 17682 GEFWLGNDNI True PC9_epitope_Rep4 1163.5247379360299 1163.52364993586 76.038 2 -1.120830753651315 0.34336244597488874 1.0 ['nc|ENSG00000160339|Q15485-2|FCN2', 'ENSG00000160339|ENST00000291744|FCN2', 'ENSG00000085265|ENST00000371806|FCN1'] 6136 5440 APNPRDLK True PC9_epitope_Rep1 909.5032146458099 909.50210993586 25.758 2 -1.1208419833276397 0.34337086721214766 1.0 ['nc|ENSG00000163359|P12111-2|COL6A3', 'ENSG00000163359|ENST00000295550|COL6A3', 'nc|ENSG00000163359|P12111-4|COL6A3', 'ENST00000491769.1_1_2:238233419-238250825:-|nuORF'] 9134 4698 AVLSTASLAA True NCI_RA007_Epitope_Rep3 902.5072969667399 902.50618993586 25.423 2 -1.1208719848360853 0.34337928823340813 1.0 ['PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 42422 14067 IEQEGEKEKQY True H1975_Epitope_Rep2 1379.65687430439 1379.65576993586 59.261 2 -1.121005068828993 0.3434173741311652 1.0 ['ENST00000288235.8_1_15:59466065-59466374:-|nuORF'] 71188 17456 MFKLILPV True NCI_RA007_Epitope_Rep5 959.5877962169099 959.58668993586 73.93 2 -1.1210137364703312 0.3434173741311652 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 47818 20917 IYSFAITLWQM True PC9_epitope_Rep3 1371.6896950861499 1371.6885899358601 85.734 2 -1.121043366845603 0.3434173741311652 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 93120 12019 RRRREHPSNV True PC9_epitope_Rep2 1305.7126473317699 1305.7110149037899 51.548 3 -1.1211393817436919 0.3434642660203388 1.0 ['ENST00000524267.5_1_8:124279594-124286056:-|nuORF'] 129607 6427 VTGSSRVP True NCI_RA007_Epitope_Rep1 801.43446637965 801.43336993586 29.023 2 -1.121225987938198 0.3435239805078225 1.0 ['nc|ENSG00000085382|Q8IYU2-4|HACE1', 'ENSG00000085382|ENST00000262903|HACE1', 'nc|ENSG00000085382|Q8IYU2-2|HACE1', 'nc|ENSG00000085382|Q8IYU2-3|HACE1', 'ENST00000582081.5_1_17:62541968-62590137:-|nuORF', 'ENSG00000108854|ENST00000262435|SMURF2'] 118682 22817 VEARSRIL True PC9_epitope_Rep1 942.5610638750999 942.55996993586 92.578 2 -1.1212850798780338 0.34353239891768506 1.0 ['ENSG00000135312|ENST00000369947|HTR1B'] 40410 14197 HRWRFTCYYYY True H1975_Epitope_Rep3 1656.72960283552 1656.72850993586 59.945 2 -1.1213313853157867 0.3435792875278911 1.0 ['ENST00000444199.1_1_19:55208384-55209490:+|nuORF', 'nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'ENSG00000244482|ENST00000396365|LILRA6', 'ENSG00000204577|ENST00000445347|LILRB3'] 53621 23930 KWEKLSYMYGT True H1975_Epitope_Rep1 1404.6747732979998 1404.67366993586 99.325 2 -1.1214231329585806 0.3436089454247025 1.0 ['nc|ENSG00000138336|Q8NFU7-2|TET1', 'ENSG00000138336|ENST00000373644|TET1'] 75092 319 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 1.7517 3 -1.1214446714658994 0.3436089454247025 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 48273 5469 KDKNYAGK True NCI_RA007_Epitope_Rep2 922.4872302284998 922.48612993586 25.892 2 -1.1215433093264584 0.3436598407426879 1.0 ['ENST00000464350.6_1_3:66406477-66420969:+|nuORF', 'ENST00000483224.5_1_3:66354939-66420969:+|nuORF'] 44445 17005 INLAGNPLEDR True NCI_RA007_Epitope_Rep1 1210.6305999869 1210.6295099358601 70.272 2 -1.1215441143931681 0.3436598407426879 1.0 ['nc|ENSG00000079691|Q5VZK9-2|CARMIL1', 'ENSG00000079691|ENST00000329474|CARMIL1', 'ENST00000497227.1_1_6:25466074-25472787:+|nuORF', 'nc|ENSG00000079691|Q5VZK9-4|CARMIL1', 'nc|ENSG00000079691|Q5VZK9-3|CARMIL1'] 54655 8931 LADTRVTQSSI True NCI_RA007_Epitope_Rep1 1189.63026563373 1189.62916993586 38.741 2 -1.1215599914114487 0.3436598407426879 1.0 ['ENSG00000078898|ENST00000170150|BPIFB2'] 23351 20097 EVTIPTRFLFI True PC9_epitope_Rep1 1334.7598232512998 1334.7587299358602 82.131 2 -1.1216271067244001 0.3436810791403806 1.0 ['SLC4A10|p.P365T|1|0.18|ENSG00000144290|chr2:161879275-161879275|C/A|missense_variant'] 93669 14921 RTHYSELTTL True PC9_epitope_Rep6 1219.61970095003 1219.6186099358601 69.391 2 -1.1216407462309568 0.3436850878317733 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 83563 3887 QDRLLIPRWR True NCI_RA007_Epitope_Rep2 1351.7836870137098 1351.78204490379 19.755 3 -1.121640811560619 0.3436850878317733 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 87197 21757 QSLLRMLFKRN True PC9_epitope_Rep6 1404.8023738529598 1404.80126993586 96.58 2 -1.1216926237892062 0.3437019181454508 1.0 ['ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENSG00000177189|ENST00000379565|RPS6KA3'] 19103 5805 ELHTFWQF True PC9_epitope_Rep5 1106.5185303567798 1106.51742993586 27.322 2 -1.121701100247588 0.3437019181454508 1.0 ['nc|ENSG00000173950|Q8NBI6-3|XXYLT1'] 117678 12980 VAKGKVHC True NCI_RA007_Epitope_Rep3 840.46399268612 840.46288993586 58.33 2 -1.1217076975753466 0.34371033297860065 1.0 ['nc|ENSG00000168356|Q9UI33-3|SCN11A', 'ENSG00000168356|ENST00000302328|SCN11A'] 122016 16266 VGQILLWDFGY True PC9_epitope_Rep5 1309.67067389373 1309.66903490379 67.558 3 -1.1218211678593508 0.3437399833322649 1.0 ['nc|ENSG00000182931|Q8IUB3-2|WFDC10B'] 76428 14636 NSVFPNWKII True PC9_epitope_Rep5 1216.6604435632 1216.65934993586 61.298 2 -1.12182184389739 0.3437399833322649 1.0 ['ZNF292|p.S1288Pfs*23|1|0.24|ENSG00000188994|chr6:87257486-87257486|T/-|frameshift_variant'] 114518 2627 TSGLPGTALP True PC9_epitope_Rep2 912.4916469026 912.49054993586 14.754 2 -1.1218416203048505 0.34376121852402686 1.0 ['ENST00000369649.8_1_X:153717326-153718941:-|nuORF', 'ENST00000263512.5_1_X:153717326-153718904:-|nuORF'] 55985 9483 LDIHHNQYK True NCI_RA007_Epitope_Rep2 1166.58325587166 1166.5821499358601 41.5 2 -1.121876721402958 0.3437696321653397 1.0 ['MYH7|p.D752H|2|0.2|ENSG00000092054|chr14:23425727-23425727|C/G|missense_variant'] 55529 4753 LAWLYFEIFDS True H1975_Epitope_Rep3 1402.68090422426 1402.6792649037902 23.409 3 -1.1219053018012517 0.34377724219270805 1.0 ['ENSG00000113838|ENST00000338733|TBCCD1'] 110096 15796 TIAHLFNVE True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 66.022 2 -1.1219242307021975 0.34377724219270805 1.0 ['ENSG00000165168|ENST00000378588|CYBB', 'CYBB|p.K331Rfs*12|1|0.56|ENSG00000165168|chrX:37803969-37803969|A/-|frameshift_variant', 'CYBB|p.W206Gfs*8|2|0.14|ENSG00000165168|chrX:37796079-37796079|C/-|frameshift_variant', 'CYBB|p.W289Gfs*24|2|0.12|ENSG00000165168|chrX:37801313-37801313|T/-|frameshift_variant'] 122763 9689 VGVFVKLW True NCI_RA007_Epitope_Rep4 946.5640239972198 946.56292993586 44.118 2 -1.1219987494849148 0.34377724219270805 1.0 ['ENST00000604187.1_1_14:50517346-50518003:+|nuORF'] 15324 8572 EAKPFLPGR True NCI_RA007_Epitope_Rep2 1013.5658149023698 1013.56470993586 37.988 2 -1.1220585289613993 0.34377724219270805 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 129774 15714 VTKRPSTHQ True PC9_epitope_Rep6 1052.5726911879601 1052.5715899358602 72.662 2 -1.1220975377320264 0.34377724219270805 1.0 ['ENST00000265070.6_1_5:32125897-32126209:-|nuORF'] 9001 23919 AVICCWER True PC9_epitope_Rep4 978.4415429893799 978.44044993586 100.45 2 -1.1221070675550422 0.34377724219270805 1.0 ['ENST00000375943.6_1_1:15769060-15773263:+|nuORF'] 20111 16369 ENKHKKDEEK True PC9_epitope_Rep6 1283.6469783270297 1283.64532490379 75.348 3 -1.122115918375116 0.34377724219270805 1.0 ['ENSG00000162434|ENST00000342505|JAK1'] 55958 7731 LDIARQRNQ True H1975_Epitope_Rep1 1112.6050539454 1112.60394993586 34.698 2 -1.1221275802841018 0.34378525279458516 1.0 ['ENSG00000273841|ENST00000217893|TAF9'] 133255 14250 WEENTPPLGPL True H1975_Epitope_Rep3 1251.6135529404298 1251.61244993586 60.154 2 -1.1221499004592204 0.34378525279458516 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 65364 8800 LSEPRMLW True H1975_Epitope_Rep2 1030.5269868655 1030.52588993586 38.815 2 -1.1221596336184014 0.34378525279458516 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 95794 13234 SDDYFIPSQ True H1975_Epitope_Rep1 1070.4556553167 1070.45454993586 56.002 2 -1.1221598229952747 0.34378525279458516 1.0 ['ENSG00000152583|ENST00000282470|SPARCL1', 'nc|ENSG00000152583|Q14515-2|SPARCL1', 'SPARCL1|p.A367T|1|0.09|ENSG00000152583|chr4:87493701-87493701|C/T|missense_variant'] 126588 7111 VPPPHLGP True H1975_Epitope_Rep3 812.45447354824 812.45336993586 32.323 2 -1.1221803495235758 0.34379366483354484 1.0 ['ENST00000585457.5_1_17:42255025-42255136:-|nuORF'] 86040 22021 QPLHIFDK True H1975_Epitope_Rep3 996.53926580136 996.53816993586 92.082 2 -1.1222283902754249 0.3438104882644755 1.0 ['PPWD1|p.V596*|1|0.26|ENSG00000113593|chr5:65586169-65586169|G/-|frameshift_variant', 'ENSG00000113593|ENST00000261308|PPWD1', 'nc|ENSG00000113593|Q96BP3-2|PPWD1'] 79415 2628 PGNREGFLWK True NCI_RA007_Epitope_Rep4 1202.6196413803798 1202.61854993586 14.731 2 -1.122267738360544 0.3438104882644755 1.0 ['nc|ENSG00000184060|Q9NPF8-2|ADAP2', 'ENSG00000184060|ENST00000330889|ADAP2'] 56284 4748 LDQNLSRCFKF True NCI_RA007_Epitope_Rep2 1369.68125566077 1369.68014993586 23.099 2 -1.1223110867929056 0.34381449245638546 1.0 ['ENSG00000079101|ENST00000692774|CLUL1'] 23151 6279 EVNMEETIY True H1975_Epitope_Rep1 1126.48524119282 1126.4836049037901 29.221 3 -1.122311963105331 0.34381449245638546 1.0 ['ENST00000474964.5_1_3:127323572-127340613:+|nuORF', 'ENSG00000073111|ENST00000265056|MCM2', 'ENST00000477668.5_1_3:127323572-127337961:+|nuORF', 'MCM2|p.A551Rfs*42|1|0.15|ENSG00000073111|chr3:127616992-127616992|G/-|frameshift_variant'] 65194 11618 LSDWKIQL True PC9_epitope_Rep5 1001.5545815123298 1001.55348993586 49.684 2 -1.1223478441270356 0.3438229035814085 1.0 ['ENSG00000163617|ENST00000295878|CCDC191', 'nc|ENSG00000163617|Q8NCU4-2|CCDC191', 'ENST00000460813.5_1_3:113723412-113755878:-|nuORF'] 139723 5839 YTWRWVWSWEW True NCI_RA007_Epitope_Rep1 1683.7622828627896 1683.76118993586 26.766 2 -1.1224364312739925 0.3438569505864257 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 76423 10982 NSVALEIQQLL True H1975_Epitope_Rep3 1226.68705223386 1226.6859499358602 47.332 2 -1.1225143231708994 0.34389099671862183 1.0 ['ENSG00000205108|ENST00000378788|FAM205A'] 88101 10973 QVWDWRTDRPR True NCI_RA007_Epitope_Rep2 1513.7538434374098 1513.75274993586 47.292 2 -1.1225956683887677 0.3439378596972455 1.0 ['ENST00000493940.2_1_1:22177888-22181121:-|nuORF'] 86484 17134 QQVTGELRKLN True PC9_epitope_Rep1 1284.7149983171996 1284.71390993586 70.729 2 -1.1226292919262464 0.3439458607298035 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 58751 19407 LFLLYRHR True PC9_epitope_Rep5 1116.65563296628 1116.6545299358602 79.696 2 -1.1226639010565105 0.3439458607298035 1.0 ['ENSG00000185033|ENST00000411539|SEMA4B'] 75217 18424 NPFVSEPGAHP True H1975_Epitope_Rep3 1150.5407223533398 1150.5396299358601 77.234 2 -1.1226973728032557 0.3439458607298035 1.0 ['ENSG00000143512|ENST00000343410|HHIPL2'] 104184 25191 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 108.87 2 -1.1226981512278198 0.3439458607298035 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 76422 13190 NSTRPARWYTK True PC9_epitope_Rep5 1378.7105816430997 1378.7094899358601 55.74 2 -1.122772667668112 0.34396667734700415 1.0 ['ENSG00000139618|ENST00000380152|BRCA2'] 43004 6956 IGENWPTRVR True NCI_RA007_Epitope_Rep1 1226.6520041378199 1226.65090993586 31.061 2 -1.12277344282419 0.34396667734700415 1.0 ['ENSG00000021776|ENST00000156471|AQR'] 76460 8923 NTCCFCWCCC True NCI_RA007_Epitope_Rep3 1184.3040061643599 1184.30290993586 42.18 2 -1.1227798515738505 0.34396667734700415 1.0 ['ENSG00000091844|ENST00000206262|RGS17'] 104183 25093 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 108.46 2 -1.1227839590462243 0.34396667734700415 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 49488 24318 KKAAAAAA True PC9_epitope_Rep2 700.4231734199599 700.42262496793 99.08 1 -1.12288419861308 0.34400430598095627 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 104181 24915 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 107.72 2 -1.122938831694076 0.34400430598095627 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 27096 8565 FLQCVAPGAAP True H1975_Epitope_Rep1 1072.5375515491999 1072.5364499358602 37.871 2 -1.1229541756847907 0.34400430598095627 1.0 ['ENSG00000103932|ENST00000304330|RPAP1', 'nc|ENSG00000103932|Q9BWH6-2|RPAP1', 'nc|ENSG00000103932|Q9BWH6-3|RPAP1'] 73603 7813 NGFPQSDPAP True H1975_Epitope_Rep1 1028.4563240230398 1028.4552299358602 35.007 2 -1.1229851553868264 0.34400430598095627 1.0 ['nc|ENSG00000249948|Q9H227|GBA3'] 46329 7066 ITFLMIAKP True H1975_Epitope_Rep3 1032.6041745570399 1032.60306993586 32.147 2 -1.1229982248442387 0.34400430598095627 1.0 ['nc|ENSG00000196277|Q14831-5|GRM7', 'nc|ENSG00000196277|Q14831-3|GRM7', 'nc|ENSG00000196277|Q14831-4|GRM7', 'ENSG00000196277|ENST00000357716|GRM7', 'nc|ENSG00000196277|Q14831-2|GRM7'] 22475 3920 ETHIRVPA True PC9_epitope_Rep4 921.50321464581 921.50210993586 21.269 2 -1.1229995180427594 0.34400430598095627 1.0 ['ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 104180 24819 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 107.32 2 -1.1230225466388608 0.3440070731144768 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 365 24279 AALALTVDLPP True H1975_Epitope_Rep3 1079.6226610721499 1079.6215699358602 101.13 2 -1.123044302713893 0.3440070731144768 1.0 ['ENSG00000125657|ENST00000245817|TNFSF9'] 124075 26598 VKRRRCGTR True PC9_epitope_Rep1 1130.6567126787797 1130.6556099358602 108.05 2 -1.1230550502815644 0.3440070731144768 1.0 ['ENST00000229633.6_1_6:126277992-126278139:+|nuORF'] 112336 12566 TMNTTCVDRFI True H1975_Epitope_Rep1 1299.59514307831 1299.59350490379 53.381 3 -1.1230739045436167 0.3440070731144768 1.0 ['ENSG00000136937|ENST00000375147|NCBP1'] 62261 16017 LLQETKEL True PC9_epitope_Rep2 972.54916177872 972.54806993586 66.864 2 -1.1231138569153907 0.3440070731144768 1.0 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 35707 12296 GTRMYEYKKI True PC9_epitope_Rep5 1287.6645429674697 1287.66289490379 52.287 3 -1.123143105636653 0.3440070731144768 1.0 ['ENSG00000136824|ENST00000374793|SMC2', 'nc|ENSG00000136824|O95347-2|SMC2'] 138750 6751 YSCAHCRAHL True NCI_RA007_Epitope_Rep3 1159.5015174769899 1159.50040993586 33.646 2 -1.1231965657463983 0.3440070731144768 1.0 ['nc|ENSG00000090238|P61236|YPEL3', 'ENST00000565479.5_1_16:30104033-30107516:-|nuORF', 'ENSG00000090238|ENST00000398841|YPEL3'] 30153 9014 FYRRYFWLEV True PC9_epitope_Rep3 1477.75065554993 1477.7490149037899 39.616 3 -1.1232141419246653 0.3440070731144768 1.0 ['PAQR9|p.V285E|1|0.04|ENSG00000188582|chr3:142962483-142962483|A/T|missense_variant'] 104178 24600 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 106.4 2 -1.1232150910118655 0.3440070731144768 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 9949 17032 AYRLEPLI True PC9_epitope_Rep4 973.5596668927699 973.55856993586 73.506 2 -1.1232215545408522 0.3440070731144768 1.0 ['nc|ENSG00000100523|Q8NEL9-2|DDHD1', 'nc|ENSG00000100523|Q8NEL9-4|DDHD1', 'ENSG00000100523|ENST00000673822|DDHD1', 'ENST00000555400.1_1_14:53521153-53527951:-|nuORF', 'nc|ENSG00000100523|Q8NEL9-3|DDHD1'] 13770 10202 DQPFRPSL True PC9_epitope_Rep5 958.4872302284999 958.48612993586 44.231 2 -1.1232631388213579 0.3440070731144768 1.0 ['ENSG00000150938|ENST00000280527|CRIM1'] 125537 12744 VLWEWNVERNK True NCI_RA007_Epitope_Rep2 1471.7571974823497 1471.7561099358602 54.189 2 -1.12333937488227 0.3440282920953833 1.0 ['WDR12|p.L168V|2|0.11|ENSG00000138442|chr2:202896172-202896172|G/C|missense_variant'] 64933 16490 LSCHCHSC True PC9_epitope_Rep4 888.3040635404002 888.30296993586 71.399 2 -1.1233608191730586 0.3440366972477064 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 22017 13270 ESQAAKDLLYR True H1975_Epitope_Rep1 1292.67246479888 1292.6713699358602 56.143 2 -1.1234612136692725 0.34408354154654364 1.0 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 44476 7869 INSAAAQM True PC9_epitope_Rep5 804.37998827864 804.37888993586 35.211 2 -1.1234862795904637 0.34410475873202984 1.0 ['nc|ENSG00000179832|Q8NDA8-7|MROH1', 'nc|ENSG00000179832|Q8NDA8-2|MROH1', 'ENST00000532255.5_1_8:145218705-145305309:+|nuORF', 'ENSG00000179832|ENST00000326134|MROH1'] 80028 19000 PKGKAPLRARS True NCI_RA007_Epitope_Rep5 1179.72002412799 1179.7189299358602 79.941 2 -1.1236529227947254 0.3441644137506887 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 118514 5894 VDSSNYMPQLF True NCI_RA007_Epitope_Rep3 1299.58053855999 1299.57944993586 30.16 2 -1.1237723980397851 0.3442408712363869 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3', 'nc|ENSG00000182621|Q9NQ66-2|PLCB1', 'ENSG00000182621|ENST00000338037|PLCB1'] 14588 7883 DVHFLDAR True NCI_RA007_Epitope_Rep1 971.4824792012299 971.48138993586 34.656 2 -1.1238015665353873 0.3442408712363869 1.0 ['ENST00000489692.1_2_1:235492468-235492705:+|nuORF'] 99296 8655 SLDINKLPG True PC9_epitope_Rep1 955.5338460677499 955.53274993586 38.13 2 -1.1238227513710242 0.3442408712363869 1.0 ['nc|ENSG00000141867|O60885-3|BRD4', 'nc|ENSG00000141867|O60885-2|BRD4', 'ENSG00000141867|ENST00000679869|BRD4', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 65638 4002 LSGQQDRRND True H1975_Epitope_Rep2 1187.5643113322299 1187.5626749037901 20.465 3 -1.123840207788724 0.3442492729113016 1.0 ['nc|ENSG00000090530|Q8IVL5-2|P3H2', 'TP63-LEPREL1|1|fusion', 'P3H2|p.G696Afs*2|1|0.08|ENSG00000090530|chr3:189957948-189957952|CTTCC/-|frameshift_variant', 'ENSG00000090530|ENST00000319332|P3H2', 'TP63-LEPREL1|2|fusion'] 78509 6289 PDIAAEYR True PC9_epitope_Rep1 933.45559574705 933.45448993586 29.003 2 -1.1238625167502312 0.34425326380792537 1.0 ['ASPM|p.I2821Nfs*7|2|0.12|ENSG00000066279|chr1:197100789-197100790|-/T|frameshift_variant', 'ENSG00000066279|ENST00000367409|ASPM', 'ASPM|p.C1500Lfs*9|1|0.12|ENSG00000066279|chr1:197104752-197104753|-/A|frameshift_variant', 'nc|ENSG00000066279|Q8IZT6-2|ASPM'] 130200 6653 VTSAQSWRP True NCI_RA007_Epitope_Rep2 1030.5195929859399 1030.51848993586 30.489 2 -1.1238839884625633 0.34425326380792537 1.0 ['ENST00000551000.1_1_12:57871422-57871623:-|nuORF'] 66104 5965 LSNRMNYFQVA True NCI_RA007_Epitope_Rep1 1341.64995553249 1341.64831490379 27.25 3 -1.1239446139552203 0.3442608250064053 1.0 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 4851 19385 ALFPVPEGAP True PC9_epitope_Rep2 996.5280324113198 996.52692993586 79.942 2 -1.123954054136709 0.3442608250064053 1.0 ['nc|ENSG00000185787|Q9UBU8|MORF4L1'] 124682 8978 VLIPMFETVTK True PC9_epitope_Rep1 1276.7100961775598 1276.70845490379 39.379 3 -1.1239658121177547 0.3442608250064053 1.0 ['ENSG00000160191|ENST00000291539|PDE9A', 'nc|ENSG00000160191|O76083-12|PDE9A', 'nc|ENSG00000160191|O76083-15|PDE9A', 'nc|ENSG00000160191|O76083-14|PDE9A', 'nc|ENSG00000160191|O76083-5|PDE9A', 'nc|ENSG00000160191|O76083-2|PDE9A', 'nc|ENSG00000160191|O76083-13|PDE9A', 'nc|ENSG00000160191|O76083-8|PDE9A', 'nc|ENSG00000160191|O76083-6|PDE9A', 'nc|ENSG00000160191|O76083-16|PDE9A', 'nc|ENSG00000160191|O76083-10|PDE9A', 'ENST00000470987.5_1_21:44117526-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-3|PDE9A', 'nc|ENSG00000160191|O76083-4|PDE9A', 'nc|ENSG00000160191|O76083-11|PDE9A', 'nc|ENSG00000160191|O76083-9|PDE9A', 'ENST00000489319.5_1_21:44178904-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-7|PDE9A'] 139144 9033 YSQTLSLH True PC9_epitope_Rep4 947.4712458111899 947.47014993586 42.318 2 -1.1239675134797458 0.3442608250064053 1.0 ['ENSG00000159708|ENST00000329956|LRRC36', 'nc|ENSG00000159708|Q1X8D7-3|LRRC36', 'nc|ENSG00000159708|Q1X8D7-2|LRRC36'] 64030 10941 LQDERGVDP True H1975_Epitope_Rep3 1027.4934378077498 1027.4923499358601 47.171 2 -1.12397678716403 0.3442608250064053 1.0 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 99861 18980 SLHEPGFF True NCI_RA007_Epitope_Rep5 932.4392174069199 932.43812993586 79.849 2 -1.1239877585181803 0.3442608250064053 1.0 ['ENST00000259605.10_1_9:36338912-36339155:-|nuORF'] 57721 21416 LENLHLRKRWK True PC9_epitope_Rep3 1491.87865002771 1491.87754993586 87.668 2 -1.124023593878923 0.3442608250064053 1.0 ['ENSG00000185947|ENST00000300870|ZNF267', 'ENST00000575471.2_1_16:31925765-31927799:+|nuORF'] 58962 16678 LFYKYMHKKYR True NCI_RA007_Epitope_Rep1 1575.83842500851 1575.83732993586 68.994 2 -1.1240490976035522 0.3442807736646599 1.0 ['nc|ENSG00000100678|P57103-3|SLC8A3', 'SLC8A3|p.E535Nfs*35|2|0.17|ENSG00000100678|chr14:70166820-70166820|C/-|frameshift_variant'] 16308 8149 EEIRNHVLR True H1975_Epitope_Rep1 1164.63635407368 1164.6352499358602 36.285 2 -1.1240633012521728 0.3442807736646599 1.0 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP'] 62705 13739 LLWYFVIVF True PC9_epitope_Rep1 1198.67905374946 1198.67740490379 57.693 3 -1.1241061650799735 0.3442807736646599 1.0 ['ENSG00000165120|ENST00000297819|SSMEM1'] 12940 19899 DLNSEREYLE True H1975_Epitope_Rep2 1266.5728103272597 1266.57170993586 82.525 2 -1.1241515115241332 0.3442807736646599 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 85860 16558 QNFQVLMI True PC9_epitope_Rep4 991.5160878286298 991.51498993586 71.665 2 -1.1241803050524406 0.3442807736646599 1.0 ['ENSG00000125780|ENST00000381458|TGM3'] 62796 8137 LMEVSEAG True PC9_epitope_Rep5 834.3793195722999 834.37822993586 36.239 2 -1.1241824192692051 0.3442807736646599 1.0 ['ENST00000416555.1_1_21:41097810-41097978:+|nuORF'] 62995 10666 LNESSKNI True PC9_epitope_Rep2 903.46616043075 903.46506993586 46.34 2 -1.1242215939391789 0.3442807736646599 1.0 ['nc|ENSG00000148053|Q16620-7|NTRK2', 'nc|ENSG00000148053|Q16620-2|NTRK2', 'nc|ENSG00000148053|Q16620-3|NTRK2', 'nc|ENSG00000148053|Q16620-5|NTRK2', 'nc|ENSG00000148053|Q16620-6|NTRK2', 'nc|ENSG00000148053|Q16620|NTRK2', 'ENSG00000148053|ENST00000277120|NTRK2'] 54664 8352 LADYAAPP True PC9_epitope_Rep1 816.4017692690398 816.40066993586 36.96 2 -1.124232849246522 0.3442807736646599 1.0 ['ENSG00000214336|ENST00000428390|FOXI3'] 28250 3857 FRTHFGGG True PC9_epitope_Rep2 877.4194850218497 877.41838993586 20.103 2 -1.1242915723693274 0.3442807736646599 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 110126 13502 TIARWEVFL True PC9_epitope_Rep2 1133.62332977849 1133.62168490379 57.223 3 -1.1243069399139558 0.3442807736646599 1.0 ['ENSG00000140465|ENST00000379727|CYP1A1'] 37361 16053 GVWYKYQPL True PC9_epitope_Rep2 1152.59678067748 1152.59512490379 67.004 3 -1.1243789048632433 0.34430198152963326 1.0 ['ANO4|p.L732Qfs*8|1|0.35|ENSG00000151572|chr12:101110449-101110449|T/-|frameshift_variant', 'nc|ENSG00000151572|Q32M45-2|ANO4', 'ENSG00000151572|ENST00000392977|ANO4'] 53417 9223 KVFPETRDYS True PC9_epitope_Rep4 1240.6088019131598 1240.60714490379 43.074 3 -1.1245042463204553 0.34433599754073163 1.0 ['LAMP3|p.A29V|1|0.5|ENSG00000078081|chr3:183154355-183154355|G/A|missense_variant'] 31600 23969 GEGCAGCF True H1975_Epitope_Rep1 742.2414462005 742.2408949679301 99.48 1 -1.1245694849496393 0.34436958860597366 1.0 ['ENST00000446041.6_1_3:140660682-140660838:+|nuORF'] 22764 10510 EVCKKFMERDP True PC9_epitope_Rep3 1380.6529923075998 1380.65134490379 45.364 3 -1.1246490722075124 0.34436958860597366 1.0 ['ENSG00000118939|ENST00000377595|UCHL3', 'ENST00000607339.1_1_13:76178789-76179945:+|nuORF'] 44857 24098 IPYPIKDVVLC True PC9_epitope_Rep2 1258.69953149386 1258.69789490379 98.193 3 -1.1246629472215852 0.34436958860597366 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'ENST00000504467.5_1_5:115348136-115357442:+|nuORF', 'ENST00000503203.5_1_5:115350153-115355748:+|nuORF', 'ENST00000515454.5_1_5:115350123-115359090:+|nuORF'] 44452 9428 INLLDVLHI True NCI_RA007_Epitope_Rep2 1048.62808080576 1048.6269899358601 41.283 2 -1.1246669755972787 0.34436958860597366 1.0 ['ENSG00000101751|ENST00000579534|POLI'] 121777 3625 VGMIHKAA True NCI_RA007_Epitope_Rep1 825.4530936492499 825.45198993586 18.043 2 -1.1247127714440284 0.3443779858344967 1.0 ['ENST00000521663.1_1_8:58192902-58193274:+|nuORF'] 3824 14539 AGVSHHAWLI True PC9_epitope_Rep4 1089.57196291197 1089.5708699358602 63.838 2 -1.1247283315301273 0.3443819721051755 1.0 ['ENST00000295549.8_1_2:177494902-177497775:-|nuORF'] 79369 24874 PGKVLVPLA True H1975_Epitope_Rep2 892.5745886809199 892.57348993586 102.25 2 -1.1247320982603393 0.3443819721051755 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 36864 7776 GVQAPKPV True NCI_RA007_Epitope_Rep2 794.46503823194 794.46394993586 34.875 2 -1.1247725389889338 0.3444031762295082 1.0 ['ENST00000388759.7_1_3:23958288-23958423:-|nuORF'] 83963 8158 QELLRTAP True H1975_Epitope_Rep2 926.5185303567799 926.51742993586 36.331 2 -1.1247914210781356 0.344411572597687 1.0 ['ENST00000572710.5_1_17:55058482-55065084:+|nuORF'] 71649 22955 MLRIWRVKSVI True PC9_epitope_Rep4 1399.84859576939 1399.84748993586 96.517 2 -1.1248247563722218 0.34441555780387534 1.0 ['TMEM266|p.R214S|1|0.25|ENSG00000169758|chr15:76171121-76171121|G/T|missense_variant'] 23479 9822 EVYNATRVP True H1975_Epitope_Rep2 1047.53490869691 1047.53380993586 42.764 2 -1.1248370792312057 0.34441555780387534 1.0 ['ENST00000468468.5_1_11:864058-866627:+|nuORF', 'ENSG00000214063|ENST00000397397|TSPAN4', 'ENST00000464987.5_1_11:865621-866627:+|nuORF'] 102615 10837 SQASC[Carbamidomethyl]WVC[Carbamidomethyl]Y True H1975_Epitope_Rep2 1159.44266574705 1159.4415699358601 46.713 2 -1.1248485237375456 0.34442395369089696 1.0 ['ENST00000265052.9_1_3:127407937-127408063:-|nuORF'] 71672 23731 MLTREIKKGN True H1975_Epitope_Rep1 1188.6648773206398 1188.66376993586 98.521 2 -1.1248987819247094 0.3444535512127654 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2'] 64935 16416 LSCHCHSC True PC9_epitope_Rep5 888.3040635404002 888.30296993586 68.145 2 -1.1249234783643471 0.3444535512127654 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 31602 23879 GEGCAGCF True H1975_Epitope_Rep3 742.2414462005 742.2408949679301 99.565 1 -1.1250346518783974 0.3444875587485753 1.0 ['ENST00000446041.6_1_3:140660682-140660838:+|nuORF'] 17944 12823 EIEQYSVRATY True H1975_Epitope_Rep1 1357.65139500113 1357.6502899358602 54.389 2 -1.1250553924203914 0.3445171535043348 1.0 ['APOB|p.S1017R|1|0.18|ENSG00000084674|chr2:21019062-21019062|G/T|missense_variant'] 4351 3070 AIPAQQFD True NCI_RA007_Epitope_Rep2 888.4341320264799 888.43302993586 16.556 2 -1.1250876839394792 0.3445171535043348 1.0 ['ENST00000515740.5_1_4:926277-945448:+|nuORF'] 99325 13378 SLDPHLPLAS True PC9_epitope_Rep1 1048.5553097883198 1048.5542099358602 56.318 2 -1.125166424421131 0.3445511589191958 1.0 ['PCDHB12|p.Q494L|1|0.24|ENSG00000120328|chr5:141210388-141210388|A/T|missense_variant'] 114743 4937 TSVITQAPP True PC9_epitope_Rep1 912.4916469025999 912.49054993586 23.852 2 -1.1252192754655777 0.3445635332232082 1.0 ['nc|ENSG00000170653|P17544-2|ATF7', 'nc|ENSG00000170653|P17544-3|ATF7', 'ENSG00000170653|ENST00000420353|ATF7', 'nc|ENSG00000170653|P17544-1|ATF7'] 105232 12909 STRPIRIEP True PC9_epitope_Rep3 1067.60874234351 1067.60764993586 54.675 2 -1.12522195832686 0.3445635332232082 1.0 ['ENSG00000142798|ENST00000374695|HSPG2', 'ENST00000493940.2_1_1:22177888-22181121:-|nuORF'] 117565 25059 VAGGGNGGGGG True H1975_Epitope_Rep2 758.3307295870999 758.3301849679301 102.97 1 -1.1252445257682422 0.3445635332232082 1.0 ['ENSG00000121068|ENST00000240328|TBX2', 'ENST00000477081.1_1_17:59482609-59483362:+|nuORF'] 23412 15078 EVVKVSAAPV True PC9_epitope_Rep1 997.5807962601698 997.57968993586 62.816 2 -1.1253037057253372 0.34458473122134864 1.0 ['ALMS1|p.G1649V|1|0.2|ENSG00000116127|chr2:73451473-73451473|G/T|missense_variant'] 131320 5252 VVRDPQGI True NCI_RA007_Epitope_Rep4 882.4923156089399 882.49120993586 26.744 2 -1.1253416088280472 0.34459312375952367 1.0 ['THOC5-LYZ|1|fusion', 'ENSG00000090382|ENST00000261267|LYZ'] 5421 4354 ALWAAAWG True NCI_RA007_Epitope_Rep1 844.4231734199599 844.42206993586 21.042 2 -1.1254567926125856 0.3446439089349279 1.0 ['ENSG00000187664|ENST00000291481|HAPLN4'] 92612 8179 RRELWFWWRGW True H1975_Epitope_Rep3 1676.8476842525997 1676.84602490379 36.44 3 -1.1254720969470466 0.3446439089349279 1.0 ['ENST00000246635.7_1_17:39661629-39661743:-|nuORF'] 18197 13691 EIQVHQKLVAQ True PC9_epitope_Rep1 1291.7248347249101 1291.72372993586 57.515 2 -1.1254729363848786 0.3446439089349279 1.0 ['PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion', 'nc|ENSG00000135365|Q96BD5-2|PHF21A', 'nc|ENSG00000135365|Q96BD5|PHF21A', 'ENSG00000135365|ENST00000676320|PHF21A'] 15936 10930 EDSPEPQRPN True PC9_epitope_Rep1 1167.5156298043098 1167.51452993586 46.928 2 -1.1255154242455978 0.34466510454679317 1.0 ['STYXL2|p.E1053D|1|0.33|ENSG00000198842|chr1:167128290-167128290|G/T|missense_variant'] 45783 10715 ISNLRSEPPK True H1975_Epitope_Rep3 1139.62987171091 1139.6287699358602 46.291 2 -1.1255730594739426 0.3447074941422005 1.0 ['ENSG00000198173|ENST00000358047|FAM47C', 'FAM47C|p.R410L|1|0.53|ENSG00000198173|chrX:37009639-37009639|G/T|missense_variant'] 139728 7610 YTWRWVWSWEW True PC9_epitope_Rep3 1683.7622828627896 1683.76063490379 34.269 3 -1.1255913518573735 0.3447074941422005 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 65817 17554 LSKFQKIEP True PC9_epitope_Rep6 1088.62299542532 1088.62188993586 80.161 2 -1.1256469430048133 0.34471147075016323 1.0 ['nc|ENSG00000107959|Q5JRX3-3|PITRM1', 'ENSG00000107959|ENST00000224949|PITRM1', 'nc|ENSG00000107959|Q5JRX3-2|PITRM1'] 133865 4115 WMFHAVTL True PC9_epitope_Rep3 1003.4949584612299 1003.49386993586 20.95 2 -1.1256565233826132 0.34471147075016323 1.0 ['ENSG00000085365|ENST00000621999|SCAMP1'] 42913 10407 IFVQLEKIW True NCI_RA007_Epitope_Rep2 1174.6750309981799 1174.67392993586 45.073 2 -1.1256802526290337 0.34471986069855576 1.0 ['nc|ENSG00000095321|P43155-3|CRAT', 'ENSG00000095321|ENST00000318080|CRAT', 'nc|ENSG00000095321|P43155-2|CRAT'] 97318 10298 SFSYKSSLR True NCI_RA007_Epitope_Rep4 1073.5505587610498 1073.54946993586 46.468 2 -1.1257221120421657 0.3447233993521873 1.0 ['ENSG00000258405|ENST00000421239|ZNF578'] 90575 25138 RKHKKHPT True PC9_epitope_Rep1 1030.6148307834599 1030.6137299358602 101.58 2 -1.1257463374787648 0.3447233993521873 1.0 ['ENSG00000130287|ENST00000252575|NCAN'] 57390 19349 LEHQKFLKHKF True PC9_epitope_Rep5 1453.8194038160898 1453.81774490379 79.472 3 -1.1257582424471368 0.3447233993521873 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 121871 3857 VGPCCTCCC True NCI_RA007_Epitope_Rep1 887.2468085580699 887.24570993586 19.014 2 -1.1257768555756067 0.3447233993521873 1.0 ['nc|ENSG00000112212|Q5TGU0-2|TSPO2'] 126018 10271 VPALTLAP True PC9_epitope_Rep1 780.47454028648 780.47344993586 44.392 2 -1.1257800982396087 0.3447233993521873 1.0 ['nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 139741 17762 YTYPYAYYMES True H1975_Epitope_Rep2 1449.5798698536498 1449.57876993586 73.641 2 -1.1257944401380129 0.34473178850339264 1.0 ['ENST00000452385.5_1_3:48982572-49020700:+|nuORF', 'ENSG00000177479|ENST00000356401|ARIH2'] 64929 15882 LSCHCHSC True PC9_epitope_Rep4 888.3040635404002 888.30296993586 69.021 2 -1.1260481588313485 0.3448381810733306 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 22613 9156 ETQAAEIW True H1975_Epitope_Rep2 946.4396113297399 946.4390649679301 40.17 1 -1.1260543908476142 0.3448381810733306 1.0 ['ENSG00000197548|ENST00000693202|ATG7', 'nc|ENSG00000197548|O95352-2|ATG7'] 18312 16527 EITSHFIFL True PC9_epitope_Rep5 1105.58079626017 1105.5796899358602 68.572 2 -1.1261213961754872 0.34487217236567536 1.0 ['ENST00000535264.5_1_5:64865821-64867835:+|nuORF'] 98212 8989 SIEAELHISYR True H1975_Epitope_Rep3 1316.6724647988801 1316.6713699358602 39.571 2 -1.126160087920182 0.3448805591827329 1.0 ['ENSG00000244476|ENST00000472091|ERVFRD-1'] 64918 17311 LSCHCHSC True PC9_epitope_Rep1 888.3040635404002 888.30296993586 71.403 2 -1.1261727211434371 0.3448845306979364 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 73593 16228 NGEKEQKVFSF True H1975_Epitope_Rep1 1311.6459156978697 1311.6448099358602 67.769 2 -1.1261993921760627 0.3448845306979364 1.0 ['ENSG00000224586|ENST00000412168|GPX5'] 139595 17034 YTQDQHLHNF True PC9_epitope_Rep5 1301.5788987672101 1301.5778099358602 70.539 2 -1.1262207464070888 0.34488850200978005 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9', 'nc|ENSG00000088387|Q9BZ29-6|DOCK9'] 46477 15104 ITNVVRDVNSI True PC9_epitope_Rep5 1228.67755017932 1228.67644993586 63.104 2 -1.1262318446275497 0.34488850200978005 1.0 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103612112-103682069:-|nuORF', 'ENST00000506478.1_1_4:103643970-103645033:-|nuORF'] 85973 11065 QPFHFLPTP True PC9_epitope_Rep6 1082.5549158654999 1082.55380993586 53.48 2 -1.1262633123193806 0.3449096890641201 1.0 ['ENST00000240123.11_2_8:22432250-22432496:+|nuORF'] 48171 23734 KATGEEEG True NCI_RA007_Epitope_Rep5 819.36102665587 819.35992993586 98.636 2 -1.1263283524000816 0.34491807475678443 1.0 ['ENSG00000135521|ENST00000367576|LTV1'] 87277 19210 QSSVVRCRPLT True NCI_RA007_Epitope_Rep5 1244.6659399497998 1244.66484993586 80.756 2 -1.1263775931809237 0.3449392608901576 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 126237 16946 VPGWKLCP True NCI_RA007_Epitope_Rep2 898.4734947406598 898.47238993586 70.654 2 -1.1264629843777954 0.3449988479557615 1.0 ['ENSG00000152219|ENST00000282032|ARL14EP'] 95850 9068 SDLGGPLPADP True PC9_epitope_Rep5 1037.5029398622898 1037.50184993586 39.825 2 -1.126536139545307 0.34501561619988735 1.0 ['ENST00000571707.1_1_17:79609405-79612656:+|nuORF', 'ENSG00000182612|ENST00000611590|TSPAN10'] 107500 5755 TAALQEGLR True H1975_Epitope_Rep1 957.5243440132099 957.52324993586 27.207 2 -1.1265548950587698 0.34501561619988735 1.0 ['ENSG00000160282|ENST00000397746|FTCD', 'nc|ENSG00000160282|O95954-2|FTCD'] 458 8355 AALVHSDD True PC9_epitope_Rep1 826.38209645362 826.38098993586 36.973 2 -1.126716239836981 0.3450496 1.0 ['ENST00000506951.5_1_4:20711306-20720453:+|nuORF', 'nc|ENSG00000163138|Q8N7B6-2|PACRGL', 'ENSG00000163138|ENST00000503585|PACRGL', 'nc|ENSG00000163138|Q8N7B6-4|PACRGL'] 19514 14118 ELQMKKKGF True PC9_epitope_Rep6 1107.6110508426298 1107.6099499358602 66.174 2 -1.1267832190393208 0.3450663663010227 1.0 ['ENSG00000165168|ENST00000378588|CYBB', 'CYBB|p.K331Rfs*12|1|0.56|ENSG00000165168|chrX:37803969-37803969|A/-|frameshift_variant'] 131274 4191 VVQLLLKPVL True PC9_epitope_Rep1 1120.7583666993198 1120.7572699358602 21.017 2 -1.1267885027940332 0.3450663663010227 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 18174 12305 EIQDLRGSI True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 52.323 2 -1.1268015310874058 0.34507033239898116 1.0 ['SUN5|p.M162I|2|0.25|ENSG00000167098|chr20:32995667-32995667|C/A|missense_variant'] 62388 16880 LLRRLWWEDCW True PC9_epitope_Rep1 1574.7816384083796 1574.78054993586 69.752 2 -1.126831128844033 0.34507033239898116 1.0 ['AluJr4_dup4313|chr3:128811130-128811275:-|1.1423359140543188|0.0007489705087858|10.57|502.0|1|1|sense'] 34219 17106 GPKAKKSGSK True NCI_RA007_Epitope_Rep3 986.5872786229398 986.58618993586 75.158 2 -1.1268728653761246 0.345074298293891 1.0 ['nc|ENSG00000118307|Q6TDU7-3|DNAI7', 'ENSG00000118307|ENST00000395987|DNAI7'] 64942 8541 LSC[Carbamidomethyl]HLQCP True H1975_Epitope_Rep3 956.42080782423 956.4197099358599 37.841 2 -1.126889086897828 0.345074298293891 1.0 ['ENST00000329138.8_1_17:79668995-79669127:+|nuORF'] 37669 20859 HAHMHHRHR True PC9_epitope_Rep3 1217.5849447208502 1217.5832849037902 85.507 3 -1.1269550608505705 0.34507826398576785 1.0 ['nc|ENSG00000206538|A8MV65-2|VGLL3', 'ENSG00000206538|ENST00000398399|VGLL3'] 73953 23119 NHLYVQRRL True NCI_RA007_Epitope_Rep5 1197.6730739355698 1197.67141490379 96.178 3 -1.1269573003317555 0.34507826398576785 1.0 ['ENST00000471198.1_1_3:167344976-167371234:-|nuORF'] 10910 5870 DASSFFFPP True H1975_Epitope_Rep3 1013.4494477374499 1013.44834993586 27.59 2 -1.127006006754167 0.34511224306959837 1.0 ['nc|ENSG00000105737|Q16478-2|GRIK5'] 75052 26554 NMERPVRYI True PC9_epitope_Rep2 1176.6073624445198 1176.60571490379 108.71 3 -1.1270894708181338 0.3451290058359783 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 98399 21672 SIIGRLLEV True PC9_epitope_Rep1 998.6124307416198 998.61132993586 88.19 2 -1.1271046994922198 0.3451290058359783 1.0 ['ENSG00000172531|ENST00000376745|PPP1CA'] 137841 16814 YPGPVLLL True H1975_Epitope_Rep1 870.5214904789 870.52038993586 70.084 2 -1.1271612253928796 0.34513738689737256 1.0 ['nc|ENSG00000183260|Q9H3Z7|ABHD16B'] 17567 15653 EHKEIEYV True PC9_epitope_Rep4 1045.50802524273 1045.5069299358602 68.136 2 -1.1271935633136652 0.3451536945560646 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1', 'BAIAP2L1|p.E165G|1|0.47|ENSG00000006453|chr7:98315605-98315605|T/C|missense_variant'] 36215 15650 GVGARGPR True PC9_epitope_Rep3 768.43546943916 768.43436993586 65.343 2 -1.1272644723606478 0.3451536945560646 1.0 ['ENST00000370210.3_2_X:152736080-152736602:-|nuORF'] 63615 18546 LPLREVVSI True PC9_epitope_Rep5 1024.62808080576 1024.6269899358601 76.36 2 -1.12727270158775 0.3451536945560646 1.0 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 129449 8597 VTELLEEFSPV True NCI_RA007_Epitope_Rep2 1261.64418436237 1261.6430899358602 38.085 2 -1.1273139430718904 0.3451536945560646 1.0 ['ENSG00000101751|ENST00000579534|POLI'] 78501 17793 PDGQQVLTVP True PC9_epitope_Rep3 1052.55022440788 1052.54912993586 73.641 2 -1.127387191563939 0.3451536945560646 1.0 ['nc|ENSG00000104064|Q06547-4|GABPB1', 'nc|ENSG00000104064|Q06547-3|GABPB1', 'ENSG00000104064|ENST00000380877|GABPB1', 'nc|ENSG00000104064|Q06547|GABPB1'] 108052 5347 TDGGGYVKR True NCI_RA007_Epitope_Rep1 951.47739382079 951.47628993586 24.876 2 -1.127452580379252 0.34516603749440145 1.0 ['ENST00000225726.9_1_17:61850918-61850993:-|nuORF'] 22045 8562 ESRHLHVP True NCI_RA007_Epitope_Rep2 973.50936265541 973.50826993586 37.948 2 -1.127468238141886 0.34516603749440145 1.0 ['KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant'] 13251 10492 DLVIHGSP True PC9_epitope_Rep1 836.4392174069201 836.43812993586 45.247 2 -1.1274750249853387 0.34516603749440145 1.0 ['ENST00000438163.1_1_2:32427889-32428366:+|nuORF'] 44001 17144 ILHSLKTQSL True PC9_epitope_Rep6 1138.6710082469 1138.66990993586 78.53 2 -1.1275503869710668 0.345174417116679 1.0 ['OR4A15|p.I265Nfs*2|1|0.13|ENSG00000181958|chr11:55368765-55368766|-/A|frameshift_variant', 'ENSG00000181958|ENST00000641526|OR4A15', 'nc|ENSG00000181958|Q8NGL6|OR4A15'] 78699 19869 PEEKKLKIIL True NCI_RA007_Epitope_Rep4 1209.76965965901 1209.7680149037901 85.883 3 -1.1276435932226707 0.3451827965244987 1.0 ['SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion', 'nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 56486 12634 LDTKHYPY True H1975_Epitope_Rep3 1035.50254593947 1035.5014499358601 53.802 2 -1.1277245581152087 0.3452251468348923 1.0 ['ENSG00000136854|ENST00000373299|STXBP1', 'nc|ENSG00000136854|P61764-2|STXBP1'] 81963 21556 PSQPRARKRR True PC9_epitope_Rep6 1250.7432191840599 1250.74212993586 95.789 2 -1.1277924669755564 0.3452251468348923 1.0 ['ENST00000394998.5_1_16:31044619-31045584:+|nuORF', 'ENST00000493902.5_1_16:31044585-31047064:+|nuORF'] 66628 8272 LSSQDEEEQD True H1975_Epitope_Rep1 1178.4575057915 1178.4564099358602 36.752 2 -1.1278302693791313 0.3452463211772233 1.0 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 134599 15000 WWDIYYTLFEK True H1975_Epitope_Rep1 1562.7445671099797 1562.74397496793 62.944 1 -1.1278831859084986 0.34525028150271264 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 38158 4766 HERKEETF True PC9_epitope_Rep4 1074.5094222250598 1074.50832993586 24.902 2 -1.1278875285683545 0.34525028150271264 1.0 ['ENSG00000131153|ENST00000253462|GINS2'] 109184 22909 TFRRNIRKFVP True PC9_epitope_Rep6 1432.8415362429998 1432.8404299358601 101.23 2 -1.1278999964122756 0.3452586592965081 1.0 ['nc|ENSG00000172139|Q4G0N8-2|SLC9C1', 'ENSG00000172139|ENST00000305815|SLC9C1'] 3708 12392 AGSGVCWLLL True PC9_epitope_Rep3 1017.5317378927699 1017.53064993586 52.695 2 -1.1279087757244421 0.3452626191542448 1.0 ['ENST00000376395.8_2_9:86322580-86322796:-|nuORF'] 117225 17687 TYVENLRLL True PC9_epitope_Rep6 1119.62880908175 1119.6277099358601 80.667 2 -1.127909634722704 0.3452626191542448 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'SYNE2|p.Q678Tfs*7|1|0.14|ENSG00000054654|chr14:63983759-63983760|-/A|frameshift_variant'] 122258 21253 VGRRLPGS True PC9_epitope_Rep1 840.4929843152798 840.49188993586 86.573 2 -1.1279397604965589 0.34527099646860127 1.0 ['ENSG00000159445|ENST00000368814|THEM4'] 80416 10290 PLKEEDQK True H1975_Epitope_Rep1 985.5080252427298 985.50692993586 44.525 2 -1.1279684057047363 0.3452793735685863 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'TOGARAM2|p.G616Rfs*15|1|0.23|ENSG00000189350|chr2:29024366-29024367|-/C|frameshift_variant', 'ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 33215 12564 GLADIPCLVI True PC9_epitope_Rep5 1012.56270366788 1012.56160993586 53.328 2 -1.1279938982588726 0.345282874030859 1.0 ['ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1'] 101432 1442 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 7.8399 2 -1.1279961807097758 0.345282874030859 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 8678 20704 AVCEEDLMP True PC9_epitope_Rep5 1005.4147191048498 1005.41362993586 84.695 2 -1.1280044108596208 0.345282874030859 1.0 ['RBM15B|p.S844Pfs*27|1|0.57|ENSG00000259956|chr3:51393922-51393922|G/-|frameshift_variant', 'ENSG00000259956|ENST00000563281|RBM15B'] 19993 7240 EMGFDRYKM True H1975_Epitope_Rep1 1175.5103508251898 1175.50924993586 32.86 2 -1.1280128932233453 0.345282874030859 1.0 ['TFRC-TCTEX1D2|1|fusion', 'chr3:196307012-196312263|152|20.79|0.68|4.92|-|2|TE_info:AluSx1,AluSx1_dup23746,Alu,SINE,donor,-,196312263,196312317|DYNLT2B,None|1', 'ENST00000426563.5_1_3:196018200-196044977:-|nuORF', 'ENSG00000213123|ENST00000325318|DYNLT2B'] 76424 11475 NSVALEIQQLL True NCI_RA007_Epitope_Rep1 1226.68705223386 1226.6859499358602 48.6 2 -1.128024689257794 0.345282874030859 1.0 ['ENSG00000205108|ENST00000378788|FAM205A'] 59326 14080 LGIRDIFT True PC9_epitope_Rep1 933.52836676449 933.52726993586 58.992 2 -1.1280519443015633 0.34529125033583663 1.0 ['CON__Q9N2I2'] 15492 6029 EAQIQNFGQT True H1975_Epitope_Rep3 1134.53055159246 1134.5294499358602 28.205 2 -1.1280955305418336 0.3453207957525747 1.0 ['nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'nc|ENSG00000172915|Q8NFP9-3|NBEA', 'nc|ENSG00000172915|Q8NFP9-2|NBEA'] 45913 18119 ISRRGNARDCL True NCI_RA007_Epitope_Rep5 1259.6516868679898 1259.6505899358601 76.499 2 -1.128121891783968 0.3453207957525747 1.0 ['GRIA1|p.G321R|1|0.44|ENSG00000155511|chr5:153677093-153677093|G/C|missense_variant'] 11304 16443 DETLAKQTL True PC9_epitope_Rep6 1017.53423999057 1017.53314993586 75.658 2 -1.1281342054396375 0.3453291712509275 1.0 ['ENSG00000109920|ENST00000263773|FNBP4', 'nc|ENSG00000109920|Q8N3X1-2|FNBP4', 'ENST00000525792.5_1_11:47746320-47755666:-|nuORF'] 119440 19149 VEPKRQKLRA True NCI_RA007_Epitope_Rep5 1223.7462388758297 1223.74567496793 80.528 1 -1.1281728418984303 0.3453375465349828 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 107219 6470 SYPHLVSARP True NCI_RA007_Epitope_Rep5 1125.59309227937 1125.59198993586 31.552 2 -1.1281982967744 0.34534592160474875 1.0 ['ENST00000498526.1_1_2:130897068-130897428:-|nuORF'] 29036 15418 FTLRDLVLW True PC9_epitope_Rep5 1161.6546299067697 1161.65299490379 64.315 3 -1.1282212395892497 0.34534941731799984 1.0 ['DCDC1|p.I1627Kfs*18|1|0.15|ENSG00000170959|chr11:30894261-30894261|A/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.P1461S|1|0.38|ENSG00000170959|chr11:30903611-30903611|G/A|missense_variant', 'DCDC1|p.A1472S|1|0.43|ENSG00000170959|chr11:30903578-30903578|C/A|missense_variant'] 60956 9991 LLAEMTVG True PC9_epitope_Rep5 832.4364405255999 832.43534993586 43.406 2 -1.1282232548791993 0.34534941731799984 1.0 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B'] 19227 15446 ELKSKVLIMK True PC9_epitope_Rep1 1187.7311659753098 1187.73006993586 64.233 2 -1.12822527019475 0.34534941731799984 1.0 ['ENSG00000174799|ENST00000257287|CEP135'] 66750 4461 LSTSTVSQSL True PC9_epitope_Rep6 1021.52915461013 1021.5280499358599 24.343 2 -1.1282520706277763 0.34534941731799984 1.0 ['SMG1|p.L1340S|1|0.1|ENSG00000157106|chr16:18859116-18859116|A/G|missense_variant'] 14833 15786 DYEDPAFYML True PC9_epitope_Rep5 1262.5165413210998 1262.51544993586 65.714 2 -1.1282589188438963 0.34534941731799984 1.0 ['ENSG00000103522|ENST00000337929|IL21R'] 64958 8720 LSCTHMRIQ True PC9_epitope_Rep5 1087.52666959567 1087.5255699358602 38.484 2 -1.1282765780955875 0.34535337384074194 1.0 ['ENST00000326306.4_1_3:39371235-39371268:+|nuORF'] 34097 11578 GPAGIPGFP True PC9_epitope_Rep1 811.42283906679 811.42174993586 49.413 2 -1.128278685250227 0.34535337384074194 1.0 ['nc|ENSG00000168542|P02461-2|COL3A1', 'ENSG00000168542|ENST00000304636|COL3A1'] 67050 2921 LTARRLLPLRL True H1975_Epitope_Rep1 1320.8717737421198 1320.8701349037901 14.861 3 -1.1282967891912445 0.3453564074031439 1.0 ['ENSG00000103150|ENST00000262430|MLYCD'] 87312 19949 QSVMLALRRGD True NCI_RA007_Epitope_Rep2 1244.6659399497996 1244.66484993586 82.598 2 -1.1283168496821847 0.3453564074031439 1.0 ['ENSG00000172247|ENST00000302514|C1QTNF4'] 74634 7506 NLEKTKQKISH True NCI_RA007_Epitope_Rep2 1324.74629844548 1324.7452099358602 33.822 2 -1.1283420722694424 0.3453564074031439 1.0 ['CENPF|p.S78N|1|0.2|ENSG00000117724|chr1:214614902-214614902|G/A|missense_variant'] 22249 9186 ETDNYTMPS True H1975_Epitope_Rep2 1056.4069908721199 1056.4058899358602 40.287 2 -1.1283750395051926 0.3453564074031439 1.0 ['ENST00000489366.2_1_1:46871719-46874871:+|nuORF', 'ENST00000484697.5_1_1:46871424-46877830:+|nuORF', 'ENSG00000117480|ENST00000243167|FAAH'] 83333 20686 QAMDDLMLSPD True PC9_epitope_Rep2 1234.52097507854 1234.51986993586 85.004 2 -1.1283786356000394 0.3453564074031439 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'TP53|p.G244*|1|0.64|ENSG00000141510|chr17:7674227-7674233|TGCCGCC/-|frameshift_variant', 'TP53|p.G244Afs*3|1|0.37|ENSG00000141510|chr17:7674232-7674232|C/-|frameshift_variant', 'TP53|p.M237Gfs*20|1|0.12|ENSG00000141510|chr17:7674236-7674255|TGCAGGAACTGTTACACATG/-|frameshift_variant', 'TP53|p.L265Tfs*7|2|0.47|ENSG00000141510|chr17:7673827-7673828|-/T|frameshift_variant', 'TP53|p.K291Sfs*51|1|0.33|ENSG00000141510|chr17:7673739-7673748|TCCCCTTTCT/-|frameshift_variant', 'TP53|p.R273Lfs*72|2|0.2|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant', 'TP53|p.P301Qfs*44|1|0.58|ENSG00000141510|chr17:7673718-7673718|G/-|frameshift_variant', 'TP53|p.N268Tfs*77|1|0.33|ENSG00000141510|chr17:7673819-7673819|C/-|frameshift_variant', 'TP53|p.G266Dfs*79|1|0.27|ENSG00000141510|chr17:7673823-7673823|C/-|frameshift_variant', 'TP53|p.T230Hfs*9|1|0.2|ENSG00000141510|chr17:7674275-7674276|TA/-|frameshift_variant', 'ENST00000505014.5_1_17:7578140-7579834:-|nuORF', 'TP53|p.D207Mfs*40|1|0.47|ENSG00000141510|chr17:7674912-7674912|C/-|frameshift_variant', 'TP53|p.D207Ffs*35|1|0.2|ENSG00000141510|chr17:7674897-7674912|AAGTGTTTCTGTCATC/-|frameshift_variant', 'TP53|p.F212Sfs*3|1|0.26|ENSG00000141510|chr17:7674895-7674896|AA/-|frameshift_variant', 'TP53|p.H178Pfs*69|1|0.66|ENSG00000141510|chr17:7675079-7675079|T/-|frameshift_variant', 'TP53|p.A189Pfs*58|1|0.25|ENSG00000141510|chr17:7674966-7674966|C/-|frameshift_variant', 'TP53|p.P153Afs*28|2|0.32|ENSG00000141510|chr17:7675156-7675157|-/A|frameshift_variant', 'TP53|p.R181Lfs*4|2|0.17|ENSG00000141510|chr17:7675069-7675070|GC/-|frameshift_variant', 'TP53|p.H178Tfs*69|2|0.24|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant', 'TP53|p.G154Rfs*27|1|0.5|ENSG00000141510|chr17:7675152-7675153|-/G|frameshift_variant', 'TP53|p.P142Lfs*28|1|0.35|ENSG00000141510|chr17:7675187-7675187|G/-|frameshift_variant', 'TP53|p.G154Afs*16|4|0.36|ENSG00000141510|chr17:7675151-7675151|C/-|frameshift_variant', 'TP53|p.C135Sfs*35|2|0.43|ENSG00000141510|chr17:7675208-7675208|C/-|frameshift_variant', 'TP53|p.R158Afs*12|1|0.42|ENSG00000141510|chr17:7675140-7675140|G/-|frameshift_variant', 'TP53|p.Q144Tfs*5|1|0.46|ENSG00000141510|chr17:7675182-7675183|-/T|frameshift_variant', 'TP53|p.V172Lfs*2|1|0.43|ENSG00000141510|chr17:7675098-7675098|C/-|frameshift_variant', 'TP53|p.V157Hfs*21|1|0.45|ENSG00000141510|chr17:7675136-7675143|GCGCGGAC/-|frameshift_variant', 'TP53|p.K120Sfs*3|1|0.3|ENSG00000141510|chr17:7676012-7676012|G/-|frameshift_variant', 'TP53|p.P75Lfs*48|2|0.29|ENSG00000141510|chr17:7676145-7676145|G/-|frameshift_variant', 'TP53|p.W53Cfs*4|1|0.2|ENSG00000141510|chr17:7676210-7676211|-/A|frameshift_variant', 'TP53|p.D49Sfs*69|1|0.56|ENSG00000141510|chr17:7676209-7676224|ACCATTGTTCAATATC/-|frameshift_variant', 'TP53|p.A84Pfs*39|1|0.27|ENSG00000141510|chr17:7676119-7676119|C/-|frameshift_variant', 'TP53|p.E56Kfs*67|1|0.26|ENSG00000141510|chr17:7676204-7676204|A/-|frameshift_variant', 'TP53|p.V73Wfs*50|5|0.34|ENSG00000141510|chr17:7676153-7676153|G/-|frameshift_variant', 'TP53|p.R65Efs*58|2|0.28|ENSG00000141510|chr17:7676177-7676177|G/-|frameshift_variant', 'TP53|p.P67Rfs*76|1|0.24|ENSG00000141510|chr17:7676153-7676169|GGGGGGAGCAGCCTCTG/-|frameshift_variant', 'TP53|p.N131Qfs*17|1|0.71|ENSG00000141510|chr17:7675221-7675222|TG/-|frameshift_variant', 'TP53|p.P64Sfs*59|1|0.34|ENSG00000141510|chr17:7676178-7676179|GG/A|frameshift_variant', 'TP53|p.A129Vfs*20|1|0.19|ENSG00000141510|chr17:7675226-7675227|-/A|frameshift_variant', 'TP53|p.P128Lfs*42|1|0.2|ENSG00000141510|chr17:7675229-7675229|G/-|frameshift_variant', 'TP53-FXR2|1|fusion'] 59709 15012 LGTRSRSL True PC9_epitope_Rep2 888.51411368268 888.5130099358599 62.998 2 -1.1284192544134903 0.3453564074031439 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 96386 8614 SEHIPLGKFY True H1975_Epitope_Rep2 1189.6131590176099 1189.61152490379 38.09 3 -1.1284309350046058 0.3453564074031439 1.0 ['ENSG00000103888|ENST00000394685|CEMIP', 'nc|ENSG00000103888|Q8WUJ3-2|CEMIP'] 115553 6151 TVHPKFHYK True H1975_Epitope_Rep3 1155.61891310439 1155.6178099358601 28.671 2 -1.1284334223176502 0.3453564074031439 1.0 ['ENST00000511906.5_1_5:37379391-37721408:+|nuORF', 'ENSG00000082068|ENST00000265107|WDR70'] 97508 6494 SGPPLKAG True NCI_RA007_Epitope_Rep5 725.40718900265 725.4066449679301 31.646 1 -1.128468884978049 0.34536431887653957 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000508497.5_1_4:17579055-17583440:+|nuORF', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 18775 8988 ELDRESWVREK True H1975_Epitope_Rep1 1445.72629127689 1445.72518993586 39.478 2 -1.128490996426559 0.34536431887653957 1.0 ['ENSG00000197261|ENST00000529246|C6orf141'] 9592 11578 AYDWTPAVKF True PC9_epitope_Rep5 1196.5866099165999 1196.58496490379 49.529 3 -1.12851899513103 0.34536431887653957 1.0 ['nc|ENSG00000241644|O95050-2|INMT', 'ENSG00000241644|ENST00000013222|INMT'] 117101 17691 TYSCDPAPGPD True H1975_Epitope_Rep2 1121.4335399731299 1121.43297496793 73.369 1 -1.1285266946543024 0.34536431887653957 1.0 ['nc|ENSG00000117335|P15529-2|CD46', 'nc|ENSG00000117335|P15529-6|CD46', 'nc|ENSG00000117335|P15529|CD46', 'nc|ENSG00000117335|P15529-10|CD46', 'nc|ENSG00000117335|P15529-5|CD46', 'nc|ENSG00000117335|P15529-3|CD46', 'nc|ENSG00000117335|P15529-13|CD46', 'ENSG00000117335|ENST00000367042|CD46', 'nc|ENSG00000117335|P15529-4|CD46', 'nc|ENSG00000117335|P15529-8|CD46', 'nc|ENSG00000117335|P15529-14|CD46', 'nc|ENSG00000117335|P15529-12|CD46', 'nc|ENSG00000117335|P15529-7|CD46', 'nc|ENSG00000117335|P15529-9|CD46', 'nc|ENSG00000117335|P15529-15|CD46', 'nc|ENSG00000117335|P15529-16|CD46', 'ENST00000469535.5_1_1:207934598-207940656:+|nuORF'] 112707 7786 TPGQHNQPQ True PC9_epitope_Rep5 1005.4628063858099 1005.46170993586 34.894 2 -1.1285787650179757 0.34536827430968553 1.0 ['ENST00000431580.1_1_20:25715079-25715199:+|nuORF'] 22600 6329 ETPQTVPA True PC9_epitope_Rep3 841.4181476091699 841.4175949679301 29.374 1 -1.1286107749780105 0.34536827430968553 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 36618 13402 GVLLHLQSV True PC9_epitope_Rep4 964.5705659296401 964.56946993586 59.452 2 -1.128622120659615 0.3453761845689512 1.0 ['ENST00000511909.5_1_4:122053805-122071269:-|nuORF'] 131342 25253 VVRRVFGRIRR True H1975_Epitope_Rep1 1412.8953031513597 1412.89420993586 104.6 2 -1.1287053504638558 0.3453761845689512 1.0 ['nc|ENSG00000147256|Q6ZRI8-3|ARHGAP36', 'ARHGAP36|p.V415Pfs*2|1|0.35|ENSG00000147256|chrX:131086047-131086053|TGTGGTC/-|frameshift_variant', 'nc|ENSG00000147256|Q6ZRI8-5|ARHGAP36', 'nc|ENSG00000147256|Q6ZRI8-2|ARHGAP36', 'nc|ENSG00000147256|Q6ZRI8-4|ARHGAP36', 'ENSG00000147256|ENST00000276211|ARHGAP36'] 87611 7551 QTTAQLQVQ True PC9_epitope_Rep5 1015.5298233164699 1015.52872993586 33.995 2 -1.1287055453428858 0.3453761845689512 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 9431 16752 AVVRLPWRNRK True NCI_RA007_Epitope_Rep1 1393.8418705961697 1393.8407699358602 69.286 2 -1.1287186758558354 0.3453761845689512 1.0 ['ENST00000484991.1_1_12:111890502-111891686:-|nuORF'] 97421 20632 SGGGDRGGG True H1975_Epitope_Rep3 718.2994294588199 718.29888496793 86.225 1 -1.128838239524798 0.34543524687647864 1.0 ['ENSG00000164690|ENST00000297261|SHH'] 19046 11094 ELGPCPEDGSD True PC9_epitope_Rep5 1117.42336921225 1117.4222699358602 47.662 2 -1.128849787309249 0.34543524687647864 1.0 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11', 'ENST00000487682.5_1_1:156905794-156908468:-|nuORF'] 101139 15651 SLVLSPGACTL True PC9_epitope_Rep4 1059.56343194387 1059.5623299358601 68.129 2 -1.128879819870737 0.34543524687647864 1.0 ['ENST00000593726.5_1_19:41305476-41306130:+|nuORF'] 15813 12841 EDIRKDKKEYT True NCI_RA007_Epitope_Rep1 1423.7307079509899 1423.72960993586 53.939 2 -1.1289034105267173 0.34543524687647864 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 73633 23717 NGIPAVVWNI True PC9_epitope_Rep5 1081.59202965021 1081.59092993586 96.208 2 -1.1289677419912263 0.34544361748382313 1.0 ['ENST00000502459.5_1_4:89930209-89950779:-|nuORF', 'ENSG00000138640|ENST00000264344|FAM13A'] 87559 6274 QTLTLCLGAI True NCI_RA007_Epitope_Rep2 1031.5685173243098 1031.56740993586 29.011 2 -1.129156970225773 0.3454687280213808 1.0 ['ENSG00000198786|ENST00000361567|MT-ND5'] 55218 19606 LAPRIKWSR True PC9_epitope_Rep2 1125.67709668685 1125.6759899358601 80.799 2 -1.129164244759983 0.3454687280213808 1.0 ['nc|ENSG00000157766|P16112-3|ACAN', 'nc|ENSG00000157766|P16112-2|ACAN', 'nc|ENSG00000157766|P16112|ACAN', 'ENSG00000157766|ENST00000560601|ACAN', 'ACAN|p.P68Q|1|0.13|ENSG00000157766|chr15:88838795-88838795|C/A|missense_variant'] 64946 20197 LSCKKKVALQ True PC9_epitope_Rep4 1116.6689000719198 1116.66780993586 85.825 2 -1.1291642584930963 0.3454687280213808 1.0 ['ENSG00000171435|ENST00000339824|KSR2'] 131631 24434 VWDPRSVDLWR True NCI_RA007_Epitope_Rep1 1427.73098273451 1427.72988993586 101.24 2 -1.1292000213562388 0.3454766319289048 1.0 ['ENST00000543926.6_1_18:74647944-74680292:+|nuORF'] 73505 12700 NFEILPLEKE True H1975_Epitope_Rep1 1230.6496040959798 1230.6485099358601 53.907 2 -1.1292048874490719 0.3454766319289048 1.0 ['ENSG00000119912|ENST00000265986|IDE', 'IDE|p.I437Vfs*24|2|0.19|ENSG00000119912|chr10:92506459-92506459|T/AC|frameshift_variant', 'ENST00000478361.6_1_10:94240585-94297282:-|nuORF', 'ENST00000496903.5_1_10:94214203-94257457:-|nuORF', 'ENST00000492362.1_1_10:94240585-94257457:-|nuORF'] 27073 10133 FLPLNTPV True H1975_Epitope_Rep3 899.51165407119 899.51054993586 44.021 2 -1.129220768600478 0.3454766319289048 1.0 ['nc|ENSG00000060709|O15034-3|RIMBP2', 'nc|ENSG00000060709|O15034|RIMBP2', 'ENSG00000060709|ENST00000690449|RIMBP2'] 101431 1380 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 7.5009 2 -1.1292244696434275 0.3454766319289048 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 137382 16523 YLKYGRVYNWP True NCI_RA007_Epitope_Rep1 1457.7455701694896 1457.74446993586 68.386 2 -1.1292605071250803 0.345480583579475 1.0 ['ENST00000462251.1_1_19:11877828-11888701:+|nuORF'] 12431 7673 DKKGCHCVI True PC9_epitope_Rep4 1001.4786567740899 1001.47754993586 36.895 2 -1.1292669584118389 0.345480583579475 1.0 ['ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2', 'nc|ENSG00000133818|P62070-3|RRAS2', 'nc|ENSG00000133818|P62070-2|RRAS2'] 69235 14834 LVNGKGSLSRP True PC9_epitope_Rep3 1126.64585612822 1126.64474993586 62.195 2 -1.129305676438707 0.3454889525368249 1.0 ['nc|ENSG00000197568|Q9XRX5-2|ANKRD13C-DT'] 73330 8230 NELLLVYDK True H1975_Epitope_Rep1 1105.6019256275702 1105.60082993586 36.601 2 -1.1293255362391066 0.3454973212801596 1.0 ['nc|ENSG00000162643|Q8IWG1-2|DNAI3', 'ENSG00000162643|ENST00000294664|DNAI3'] 68277 12200 LTRKIWVPD True H1975_Epitope_Rep1 1126.6498788795 1126.6487899358601 51.947 2 -1.129394065549013 0.34552242622615453 1.0 ['ENSG00000183185|ENST00000472788|GABRR3'] 39623 7842 HPLWLRDT True H1975_Epitope_Rep1 1036.5454138109599 1036.5443099358602 35.114 2 -1.1294031135356577 0.34552242622615453 1.0 ['nc|ENSG00000171813|Q6NUJ5-2|PWWP2B', 'ENSG00000171813|ENST00000305233|PWWP2B'] 78580 12923 PDRIGRLY True NCI_RA007_Epitope_Rep5 988.5454138109599 988.54430993586 56.39 2 -1.1294379951220996 0.34552242622615453 1.0 ['ENSG00000047457|ENST00000264613|CP', 'ENST00000490639.5_1_3:148895590-148939579:-|nuORF'] 135089 18276 YALQRLRR True NCI_RA007_Epitope_Rep3 1074.6410455312998 1074.6399499358602 80.037 2 -1.129612173695197 0.345607507703323 1.0 ['ENST00000196371.9_1_5:41731180-41731306:-|nuORF'] 131308 22022 VVQSVKHTKR True PC9_epitope_Rep4 1180.70403971068 1180.70294993586 92.93 2 -1.1297654761197853 0.34562424087451254 1.0 ['ENSG00000184304|ENST00000331968|PRKD1'] 135069 13850 YALDSESPV True NCI_RA007_Epitope_Rep4 979.44984166027 979.4492949679301 60.534 1 -1.1297818389804821 0.34562424087451254 1.0 ['ENST00000508165.1_1_4:135248937-135249228:+|nuORF'] 45014 21280 IQLRGGTR True PC9_epitope_Rep6 899.5300980999899 899.52900993586 94.706 2 -1.1297954240880435 0.34563260713920424 1.0 ['DISC1|p.P129S|1|0.15|ENSG00000162946|chr1:231694143-231694143|C/T|missense_variant', 'DISC1|p.L128F|1|0.15|ENSG00000162946|chr1:231694142-231694142|G/T|missense_variant', 'nc|ENSG00000162946|Q9NRI5-10|DISC1', 'nc|ENSG00000162946|Q9NRI5-4|DISC1', 'ENST00000468399.2_1_1:231765255-231837778:+|nuORF', 'nc|ENSG00000162946|Q9NRI5-7|DISC1', 'nc|ENSG00000162946|Q9NRI5-6|DISC1', 'nc|ENSG00000162946|Q9NRI5-9|DISC1', 'nc|ENSG00000162946|Q9NRI5-3|DISC1', 'nc|ENSG00000162946|Q9NRI5-8|DISC1', 'nc|ENSG00000162946|Q9NRI5-5|DISC1', 'ENST00000422590.6_1_1:231829618-232144897:+|nuORF', 'nc|ENSG00000162946|Q9NRI5-2|DISC1', 'ENSG00000162946|ENST00000439617|DISC1'] 46316 10654 ITEYHREEEK True PC9_epitope_Rep1 1332.6309939097198 1332.62935490379 45.872 3 -1.1298581927677156 0.345636082381969 1.0 ['nc|ENSG00000164175|Q9UMX9-4|SLC45A2', 'nc|ENSG00000164175|Q9UMX9-3|SLC45A2', 'SLC45A2|p.T503Pfs*6|1|0.2|ENSG00000164175|chr5:33944735-33944735|C/-|frameshift_variant', 'ENSG00000164175|ENST00000296589|SLC45A2'] 49050 18137 KFLKKLNHREL True PC9_epitope_Rep4 1424.86160298124 1424.8599449037902 77.828 3 -1.1298948932423802 0.345636082381969 1.0 ['ENST00000377325.1_1_6:28056349-28056487:+|nuORF'] 101319 8700 SLYLSSAEHPG True NCI_RA007_Epitope_Rep1 1159.5509526838698 1159.54984993586 37.842 2 -1.1299181709935655 0.345636082381969 1.0 ['nc|ENSG00000187098|O75030-8|MITF', 'nc|ENSG00000187098|O75030-7|MITF'] 87957 9393 QVQVYELQPSN True PC9_epitope_Rep2 1303.6408303174296 1303.63972993586 41.466 2 -1.129944008465007 0.345636082381969 1.0 ['ENSG00000151929|ENST00000369085|BAG3'] 84174 8795 QESFALHSS True NCI_RA007_Epitope_Rep5 1004.45632402304 1004.45522993586 40.496 2 -1.129965391849925 0.345636082381969 1.0 ['nc|ENSG00000158352|Q9ULL8-2|SHROOM4', 'ENSG00000158352|ENST00000376020|SHROOM4'] 111279 5578 TLGYHVYPT True PC9_epitope_Rep2 1049.5181960036098 1049.5170899358602 26.846 2 -1.130018957560463 0.34564002914743747 1.0 ['nc|ENSG00000078618|O43847-2|NRDC', 'ENSG00000078618|ENST00000352171|NRDC'] 75077 780 NMQKARELWD True NCI_RA007_Epitope_Rep1 1289.61865540421 1289.61700490379 4.1227 3 -1.1300198099535974 0.34564002914743747 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 35516 21577 GTHALAHP True H1975_Epitope_Rep2 802.4085859849799 802.40748993586 89.272 2 -1.1300920728828912 0.34566117815504194 1.0 ['ENST00000505551.5_1_4:1838279-1843155:-|nuORF'] 104700 9002 STATQQELRAK True NCI_RA007_Epitope_Rep5 1231.6520637074698 1231.65096993586 41.283 2 -1.130102993424688 0.34566465121630086 1.0 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 126129 18334 VPERLEGKV True PC9_epitope_Rep5 1025.5869442697697 1025.58584993586 75.536 2 -1.130105194427298 0.34566465121630086 1.0 ['ENSG00000244405|ENST00000306376|ETV5', 'nc|ENSG00000244405|P41161-2|ETV5'] 55774 12914 LDEFLVKN True PC9_epitope_Rep2 976.5229470308799 976.52184993586 54.97 2 -1.1301582186503771 0.34566465121630086 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000496360.5_1_1:39934274-39950491:+|nuORF', 'ENST00000497807.1_1_1:39934322-39950491:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 56930 6060 LEDSLAVSH True NCI_RA007_Epitope_Rep1 969.4767251144501 969.47562993586 27.61 2 -1.1301635867745905 0.34566465121630086 1.0 ['L1MC1_dup2137|chr3:11202598-11203364:-|1.2042192408896564|0.3234029913481031|1.9|502.0|17|3|sense'] 20501 24916 EPTVLLQLP True PC9_epitope_Rep3 1008.5855472874398 1008.58444993586 101.2 2 -1.1301842523133123 0.34566465121630086 1.0 ['ENST00000407916.2_1_7:55005616-55005874:+|nuORF'] 16186 5960 EEEYPLMIMRK True H1975_Epitope_Rep2 1437.6996081468499 1437.69850993586 27.907 2 -1.130269858918517 0.3456848509637507 1.0 ['ENST00000489282.1_1_1:59158492-59165724:-|nuORF'] 19369 3903 ELNKPPLGP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 20.056 2 -1.130287066265084 0.3456848509637507 1.0 ['ENST00000265085.9_1_5:173315710-173315878:+|nuORF'] 123655 11390 VILTERVSL True NCI_RA007_Epitope_Rep4 1028.62299542532 1028.62188993586 50.725 2 -1.130309259188571 0.3456848509637507 1.0 ['nc|ENSG00000150527|Q96PC5-2|MIA2'] 128583 19794 VSKHRLQGF True NCI_RA007_Epitope_Rep3 1070.5985120129797 1070.59740993586 86.263 2 -1.1303201611467537 0.3456848509637507 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1'] 43350 23346 IHKLMRWIR True PC9_epitope_Rep4 1251.73865139759 1251.7375499358602 98.058 2 -1.1303442339377132 0.3456848509637507 1.0 ['ENSG00000164077|ENST00000296473|MON1A', 'nc|ENSG00000164077|Q86VX9|MON1A', 'ENST00000486107.5_1_3:49946449-49946602:-|nuORF', 'nc|ENSG00000164077|Q86VX9-2|MON1A', 'nc|ENSG00000164077|Q86VX9-4|MON1A'] 55793 12524 LDEIVDTL True PC9_epitope_Rep4 916.47532813212 916.47422993586 55.993 2 -1.1303610163289866 0.3456848509637507 1.0 ['ENST00000473565.5_1_2:201718031-201724542:-|nuORF', 'ENST00000461981.5_1_2:201722417-201724542:-|nuORF', 'ENST00000519132.5_1_5:178032378-178044013:-|nuORF', 'ENST00000519583.5_1_5:178030620-178044013:-|nuORF'] 87248 22097 QSRKPPNL True PC9_epitope_Rep3 938.5297637468199 938.52866993586 90.293 2 -1.1303689273607798 0.3456848509637507 1.0 ['ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000589582.5_1_17:74470614-74477615:-|nuORF', 'ENST00000592378.5_1_17:74475239-74483895:-|nuORF', 'ENST00000587640.1_1_17:74472910-74477606:-|nuORF'] 31742 6688 GELADTPK True NCI_RA007_Epitope_Rep2 829.41814760917 829.4175949679301 30.628 1 -1.130427945089832 0.3457187775604893 1.0 ['nc|ENSG00000143033|Q9Y483-3|MTF2', 'nc|ENSG00000143033|Q9Y483-4|MTF2', 'ENSG00000143033|ENST00000370298|MTF2'] 67144 3226 LTDEDREK True NCI_RA007_Epitope_Rep1 1004.4774533904399 1004.47634993586 16.443 2 -1.1304632342390293 0.3457355027543808 1.0 ['nc|ENSG00000088970|Q2M2Z5-2|KIZ', 'nc|ENSG00000088970|Q2M2Z5-3|KIZ', 'nc|ENSG00000088970|Q2M2Z5-4|KIZ', 'ENSG00000088970|ENST00000619189|KIZ'] 3658 17115 AGQVEVVRCL True PC9_epitope_Rep1 1072.56991430664 1072.5688099358601 70.658 2 -1.130480335613774 0.3457355027543808 1.0 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant', 'CAMK2D-ANK2|1|fusion', 'CAMK2D-ANK2|2|fusion', 'nc|ENSG00000145362|Q01484-5|ANK2', 'nc|ENSG00000145362|Q01484-2|ANK2'] 79584 8598 PGVAAKVLAA True PC9_epitope_Rep1 895.5491022090699 895.54800993586 37.908 2 -1.1305115961238732 0.3457394460704746 1.0 ['ENSG00000142409|ENST00000610935|ZNF787'] 72708 19613 MYPPANQG True NCI_RA007_Epitope_Rep5 876.37998827864 876.37888993586 82.345 2 -1.1305116699346849 0.3457394460704746 1.0 ['ENST00000542456.5_1_9:130648676-130648754:-|nuORF'] 96645 7850 SENIPVHPHDY True NCI_RA007_Epitope_Rep1 1306.59421447818 1306.5931099358602 34.525 2 -1.1305397761160851 0.345743389184975 1.0 ['ENST00000362030.3_1_1:96884238-96884478:+|nuORF'] 135875 13093 YERVSQERTVK True H1975_Epitope_Rep1 1393.7313766573295 1393.7302699358602 55.451 2 -1.1305423830826624 0.345743389184975 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 587 23908 AARRQPLPRT True PC9_epitope_Rep4 1164.6839729724397 1164.68286993586 100.41 2 -1.1306340122730203 0.3457640548519432 1.0 ['ENST00000447280.6_1_2:224903403-224903487:-|nuORF'] 68380 10499 LTSQSRAP True PC9_epitope_Rep3 858.4559301002199 858.45482993586 45.324 2 -1.130646126660299 0.3457640548519432 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614', 'nc|ENSG00000135835|Q5VZ46-2|KIAA1614'] 36098 5334 GVEGVGHL True PC9_epitope_Rep3 766.39735259494 766.3962499358599 25.594 2 -1.130661078145016 0.3457640548519432 1.0 ['nc|ENSG00000102100|P78381-3|SLC35A2'] 16772 12396 EFERYLNFYKQ True H1975_Epitope_Rep1 1535.74087871187 1535.73978993586 52.715 2 -1.1306637611148778 0.3457640548519432 1.0 ['ENSG00000146857|ENST00000662584|STRA8'] 19192 9692 ELKLDQPFIDC True H1975_Epitope_Rep2 1319.64313881655 1319.6414849037901 42.262 3 -1.1307284246935976 0.34578519578775174 1.0 ['ENSG00000138078|ENST00000409411|PREPL', 'nc|ENSG00000138078|Q4J6C6-2|PREPL', 'nc|ENSG00000138078|Q4J6C6|PREPL', 'nc|ENSG00000138078|Q4J6C6-3|PREPL'] 80391 9609 PLHPGRKD True PC9_epitope_Rep4 918.50354899898 918.50244993586 44.585 2 -1.1309464560791944 0.34584467533131413 1.0 ['ENST00000367602.7_1_1:180166494-180166779:+|nuORF'] 46563 16215 ITREKSLDLP True PC9_epitope_Rep1 1170.6608374860198 1170.6597499358602 67.188 2 -1.13095021851073 0.34584765580075905 1.0 ['nc|ENSG00000198010|Q9P1A6-3|DLGAP2', 'nc|ENSG00000198010|Q9P1A6-2|DLGAP2', 'nc|ENSG00000198010|Q9P1A6|DLGAP2', 'ENSG00000198010|ENST00000637795|DLGAP2'] 114515 15410 TSGKKGGK True NCI_RA007_Epitope_Rep2 761.4395517600899 761.43844993586 64.643 2 -1.1309617288952858 0.34584765580075905 1.0 ['ENSG00000099284|ENST00000373255|MACROH2A2'] 42697 8513 IEWLDGFPL True NCI_RA007_Epitope_Rep1 1088.5542471591598 1088.5531499358601 37.115 2 -1.1309832193166411 0.34584765580075905 1.0 ['ENST00000332624.7_1_2:202285280-202285352:-|nuORF'] 6539 6287 APVGPRAAMS True PC9_epitope_Rep1 955.49093570995 955.48982993586 28.996 2 -1.1310363187272092 0.34584765580075905 1.0 ['ENSG00000185133|ENST00000331075|INPP5J'] 60028 21017 LHRLRLRE True PC9_epitope_Rep6 1091.66759463231 1091.66707496793 93.666 1 -1.1310667194836832 0.34584765580075905 1.0 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1', 'ENST00000471767.1_1_5:176893910-176894598:-|nuORF'] 103817 11343 SRGRGALI True NCI_RA007_Epitope_Rep5 828.4929843152798 828.49188993586 50.282 2 -1.1310678316741216 0.34584765580075905 1.0 ['ENSG00000136002|ENST00000409359|ARHGEF4'] 98653 13992 SIPREVVAYNK True H1975_Epitope_Rep1 1274.6982856239 1274.69718993586 58.98 2 -1.1311713539372257 0.34584765580075905 1.0 ['nc|ENSG00000080839|P28749-2|RBL1', 'ENSG00000080839|ENST00000373664|RBL1', 'PLCB1-RBL1|1|fusion', 'PLCB1-RBL1|2|fusion'] 129886 5384 VTLSMTDTK True NCI_RA007_Epitope_Rep5 994.50049733414 994.49940993586 27.398 2 -1.131175070861794 0.34584765580075905 1.0 ['nc|ENSG00000147862|O00712-6|NFIB', 'ENSG00000147862|ENST00000380953|NFIB'] 2105 4264 AELPQKPP True H1975_Epitope_Rep2 878.4861675993399 878.48506993586 21.51 2 -1.1313637030538304 0.3458815712131667 1.0 ['ASAP1|p.E1085Sfs*9|1|0.19|ENSG00000153317|chr8:130058016-130058016|C/-|frameshift_variant', 'ENSG00000153317|ENST00000518721|ASAP1', 'nc|ENSG00000153317|Q9ULH1-2|ASAP1'] 104426 6109 SSIQPRRRWWW True NCI_RA007_Epitope_Rep4 1556.8112987438797 1556.81020993586 30.112 2 -1.1313844354967195 0.3458899295927625 1.0 ['ENST00000591247.5_1_17:42113394-42113565:-|nuORF'] 46863 12507 IVGGLCFIPMK True NCI_RA007_Epitope_Rep2 1176.63990844276 1176.63880993586 53.261 2 -1.1314029149144267 0.34589828775875286 1.0 ['ENST00000300584.7_1_15:78322423-78337251:-|nuORF'] 23119 19975 EVLWHCHLCP True PC9_epitope_Rep1 1235.55796972395 1235.55686993586 81.659 2 -1.131474727022942 0.34592336097517346 1.0 ['nc|ENSG00000073008|P15151-4|PVR', 'nc|ENSG00000073008|P15151|PVR', 'ENSG00000073008|ENST00000425690|PVR', 'ENST00000187830.2_1_19:45147391-45165075:+|nuORF'] 139151 10684 YSRQLHINF True NCI_RA007_Epitope_Rep3 1176.60399131624 1176.60235490379 49.07 3 -1.1314813590977475 0.34592336097517346 1.0 ['ENSG00000104321|ENST00000262209|TRPA1'] 79106 21639 PFYDRFHWFK True NCI_RA007_Epitope_Rep2 1441.6931406738097 1441.69204993586 89.621 2 -1.1314906135063794 0.34592336097517346 1.0 ['nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B', 'KIF1B|p.D878Y|1|0.21|ENSG00000054523|chr1:10324852-10324852|G/T|missense_variant'] 60583 20734 LIRTRSTA True PC9_epitope_Rep6 916.54541381096 916.54430993586 92.514 2 -1.1315757058593578 0.3459444955535112 1.0 ['ENSG00000154415|ENST00000284601|PPP1R3A'] 39204 11216 HLGLAQKV True PC9_epitope_Rep3 864.5181364339601 864.51702993586 48.151 2 -1.131585104613674 0.3459528524883409 1.0 ['ENST00000503185.5_1_4:774291-774366:-|nuORF'] 131533 25509 VVVGVGLIVG True PC9_epitope_Rep1 910.5851533646199 910.5846049679301 103.11 1 -1.131599456776553 0.3459563050977386 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 133799 13262 WLRHRLQWWRK True H1975_Epitope_Rep1 1663.93241693607 1663.93130993586 56.111 2 -1.1316173365230673 0.3459563050977386 1.0 ['ENSG00000256525|ENST00000539111|POLG2', 'ENST00000580893.5_1_17:62486773-62489133:-|nuORF', 'ENST00000585141.5_1_17:62481823-62493086:-|nuORF'] 29173 6934 FTYTLDEKVDK True H1975_Epitope_Rep3 1357.6765471198098 1357.6754499358601 31.633 2 -1.1316395519067959 0.3459563050977386 1.0 ['MAGEC3|p.G238Afs*4|1|0.61|ENSG00000165509|chrX:141881599-141881599|G/-|frameshift_variant', 'MAGEC3|p.A480Qfs*4|2|0.38|ENSG00000165509|chrX:141897195-141897195|G/-|frameshift_variant', 'ENSG00000165509|ENST00000298296|MAGEC3'] 85073 11915 QINLQKQPK True H1975_Epitope_Rep1 1095.6400424717897 1095.6389499358602 50.832 2 -1.1316537201953039 0.3459563050977386 1.0 ['ENSG00000180370|ENST00000327134|PAK2'] 82810 21902 PVSIEEVPP True PC9_epitope_Rep1 965.5069626135698 965.50641496793 89.059 1 -1.1316558289841019 0.3459563050977386 1.0 ['nc|ENSG00000163406|Q16348-2|SLC15A2', 'ENSG00000163406|ENST00000489711|SLC15A2'] 133433 10398 WFYYQYLLVTA True NCI_RA007_Epitope_Rep2 1465.72818876985 1465.72708993586 45.037 2 -1.1316953558872687 0.34597301717089124 1.0 ['ENSG00000165389|ENST00000298130|SPTSSA'] 1993 9436 AEKLKDDSKFS True H1975_Epitope_Rep1 1266.6455813446998 1266.64448993586 41.21 2 -1.1317124072810076 0.34597301717089124 1.0 ['ENSG00000120658|ENST00000690772|ENOX1', 'nc|ENSG00000120658|Q8TC92-2|ENOX1', 'ENSG00000165675|ENST00000394363|ENOX2', 'nc|ENSG00000165675|Q16206|ENOX2'] 41568 4871 IDEKLLYYTF True H1975_Epitope_Rep1 1303.6700051873897 1303.66834490379 23.814 3 -1.1319502976903735 0.3460575399867137 1.0 ['SF3B4|p.D118Y|1|0.34|ENSG00000143368|chr1:149926730-149926730|C/A|missense_variant'] 25754 7478 FFPRLMTEL True PC9_epitope_Rep5 1152.6001518057599 1152.5985149037901 33.716 3 -1.1319698066946338 0.3460575399867137 1.0 ['ENSG00000156162|ENST00000414645|DPY19L4'] 64875 14115 LSAQTREPRQW True H1975_Epitope_Rep2 1370.7054962626598 1370.70438993586 59.448 2 -1.1319702343940254 0.3460575399867137 1.0 ['ENSG00000181234|ENST00000435159|TMEM132C'] 109306 11666 TGGAPRILAL True PC9_epitope_Rep6 967.5814649665099 967.58036993586 56.0 2 -1.131999561459061 0.3460575399867137 1.0 ['ENSG00000084774|ENST00000264705|CAD', 'CAD|p.K1657Rfs*51|1|0.16|ENSG00000084774|chr2:27238539-27238539|A/-|frameshift_variant'] 10729 21550 CVKVYNKLKL True PC9_epitope_Rep6 1206.71585026434 1206.71474993586 95.767 2 -1.1320174268445111 0.34606147321086383 1.0 ['nc|ENSG00000143952|Q9P1Q0-3|VPS54', 'nc|ENSG00000143952|Q9P1Q0-4|VPS54', 'nc|ENSG00000143952|Q9P1Q0-2|VPS54', 'ENSG00000143952|ENST00000272322|VPS54'] 110608 8829 TITGFFAPQP True PC9_epitope_Rep1 1077.5494961318898 1077.54838993586 38.802 2 -1.1320643079730803 0.34606147321086383 1.0 ['nc|ENSG00000196408|Q8NFA2-4|NOXO1', 'ENSG00000196408|ENST00000356120|NOXO1', 'nc|ENSG00000196408|Q8NFA2-2|NOXO1', 'nc|ENSG00000196408|Q8NFA2|NOXO1'] 125740 12503 VNFQRKKWR True NCI_RA007_Epitope_Rep5 1260.7203584811598 1260.7192699358602 54.75 2 -1.1321532980692541 0.3461120833918831 1.0 ['nc|ENSG00000104755|Q99965-2|ADAM2', 'ENSG00000104755|ENST00000265708|ADAM2'] 116115 13554 TVSPQFLIDKN True NCI_RA007_Epitope_Rep1 1260.6714021697198 1260.6703099358601 56.732 2 -1.1321673834873864 0.3461120833918831 1.0 ['ENST00000588919.5_1_19:1105807-1106568:+|nuORF'] 63531 8351 LPKSWADWRWF True NCI_RA007_Epitope_Rep5 1490.7459045226599 1490.74480993586 38.794 2 -1.1321780047663534 0.3461120833918831 1.0 ['ENST00000539351.5_1_12:132569846-132570025:+|nuORF'] 138690 22580 YRTLIRPT True NCI_RA007_Epitope_Rep5 1018.5923640033799 1018.5912699358599 94.035 2 -1.1322465478741726 0.3461543374679049 1.0 ['COL26A1|p.D165Efs*14|1|0.09|ENSG00000160963|chr7:101539939-101539940|-/G|frameshift_variant', 'COL26A1|p.P325Qfs*24|2|0.22|ENSG00000160963|chr7:101549200-101549200|C/-|frameshift_variant', 'ENSG00000160963|ENST00000313669|COL26A1'] 16960 4762 EGGPLEGAAW True NCI_RA007_Epitope_Rep5 985.4505103666099 985.44940993586 25.0 2 -1.1322585417486415 0.3461543374679049 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 138749 10505 YSAVKRFI True NCI_RA007_Epitope_Rep2 982.5600012459399 982.55890993586 45.456 2 -1.132284530978545 0.34615826786740755 1.0 ['ENST00000507668.6_1_5:79437547-79437607:-|nuORF'] 790 17352 ACCVFMLLLP True H1975_Epitope_Rep3 1108.54831655704 1108.54720993586 72.399 2 -1.132293012975262 0.34615826786740755 1.0 ['ENSG00000185372|ENST00000641551|OR2V1'] 70650 9515 MCIMCRFVT True PC9_epitope_Rep6 1102.4795853742198 1102.4784899358601 46.861 2 -1.132371690392735 0.34617890125049494 1.0 ['chr5:90822097-90965415|264|32.48|0.18|7.5|+|2|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|2'] 67471 9017 LTEGVLMRDP True H1975_Epitope_Rep3 1129.58014463717 1129.5790499358602 39.681 2 -1.1324228541868597 0.34617890125049494 1.0 ['nc|ENSG00000092098|Q96EP0-2|RNF31', 'nc|ENSG00000092098|Q96EP0-3|RNF31', 'ENSG00000092098|ENST00000324103|RNF31', 'ENST00000491351.5_1_14:24616897-24626527:+|nuORF'] 92848 23771 RRLPGHVV True NCI_RA007_Epitope_Rep4 932.5668179618799 932.56572993586 103.05 2 -1.132426433277324 0.34617890125049494 1.0 ['ENST00000374979.7_2_11:124644802-124670283:-|nuORF'] 108004 7975 TDALLPASRPA True H1975_Epitope_Rep3 1110.6033226099 1110.6022299358601 35.648 2 -1.1324381426307377 0.34617890125049494 1.0 ['ENST00000563394.1_1_17:42299806-42300223:+|nuORF'] 57869 11943 LEQENHSL True PC9_epitope_Rep3 968.45632402304 968.45522993586 50.959 2 -1.1324814829896659 0.3462127985694214 1.0 ['ENSG00000234409|ENST00000439765|CCDC188', 'ENST00000512987.1_1_22:23735173-23735854:+|nuORF'] 59525 21231 LGPTTFRLSI True PC9_epitope_Rep3 1103.63389446219 1103.63278993586 86.956 2 -1.1325699508494955 0.34625946788264295 1.0 ['ENSG00000134256|ENST00000682167|CD101'] 22477 3863 ETHIRVPA True PC9_epitope_Rep6 921.50321464581 921.50210993586 21.46 2 -1.132671797488615 0.346331681397844 1.0 ['ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 32629 3972 GHFHGPWC True PC9_epitope_Rep5 939.3809913381499 939.37988993586 20.357 2 -1.132726263769977 0.34633560681533704 1.0 ['ENST00000436518.5_1_22:20117014-20127004:+|nuORF', 'ENST00000334554.11_1_22:20119331-20127004:+|nuORF'] 46012 8200 ISVDRPVPQP True NCI_RA007_Epitope_Rep2 1106.6084079903399 1106.60730993586 36.531 2 -1.1327306899487022 0.34633560681533704 1.0 ['nc|ENSG00000092529|P20807-2|CAPN3'] 42415 10192 IEPVFHVM True PC9_epitope_Rep3 970.4946241080601 970.49352993586 44.157 2 -1.132744271939751 0.34633953203228773 1.0 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'NOMO1|p.V431Rfs*29|1|0.26|ENSG00000103512|chr16:14863082-14863103|AGTTGTCCTGTCATCTCAAGAC/-|frameshift_variant'] 101116 6653 SLVFDPVQK True NCI_RA007_Epitope_Rep2 1031.5651461960297 1031.56404993586 30.489 2 -1.1327517192546925 0.34633953203228773 1.0 ['ENSG00000149480|ENST00000278823|MTA2'] 74051 9441 NHSIMQLCNSK True H1975_Epitope_Rep3 1273.59072640421 1273.58962993586 41.316 2 -1.1327881877541912 0.34634345704871133 1.0 ['ENSG00000135298|ENST00000370598|ADGRB3', 'ADGRB3|p.E154*|1|0.34|ENSG00000135298|chr6:68639127-68639128|-/T|frameshift_variant'] 5334 12233 ALSQTVSPA True PC9_epitope_Rep4 872.4603467743199 872.45924993586 54.873 2 -1.1327918144832971 0.34634345704871133 1.0 ['nc|ENSG00000224975|O15225|INE1'] 10594 4936 CRRWRYWEYWS True PC9_epitope_Rep5 1689.7622999461298 1689.7606649037903 24.023 3 -1.1328292582739294 0.3463518052593264 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 33444 15193 GLGLALRESL True PC9_epitope_Rep5 1027.60259433391 1027.6014899358602 63.446 2 -1.1328727745623348 0.3463729246487867 1.0 ['ENST00000380237.5_1_11:5289584-5289665:-|nuORF'] 45927 11241 ISRWFEVERRE True NCI_RA007_Epitope_Rep5 1505.77391017565 1505.77280993586 49.877 2 -1.1329175379665677 0.34639404349880587 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 26977 8878 FLKQGHGG True NCI_RA007_Epitope_Rep3 842.43988611326 842.43878993586 42.013 2 -1.1329733904114339 0.3464146606219271 1.0 ['nc|ENSG00000010803|Q96GD3-3|SCMH1', 'nc|ENSG00000010803|Q96GD3|SCMH1', 'ENSG00000010803|ENST00000695335|SCMH1', 'nc|ENSG00000010803|Q96GD3-6|SCMH1', 'nc|ENSG00000010803|Q96GD3-5|SCMH1', 'nc|ENSG00000010803|Q96GD3-4|SCMH1', 'nc|ENSG00000010803|Q96GD3-2|SCMH1'] 67459 7631 LTEEEAKHC True NCI_RA007_Epitope_Rep1 1058.47025983502 1058.46916993586 33.677 2 -1.1329953269916235 0.3464146606219271 1.0 ['ENSG00000039537|ENST00000337836|C6'] 115858 5446 TVNPWNNSL True PC9_epitope_Rep1 1043.5036085686302 1043.5025099358602 25.781 2 -1.1329968415185534 0.3464146606219271 1.0 ['ENSG00000111796|ENST00000229402|KLRB1'] 23249 8017 EVRHTPVL True PC9_epitope_Rep4 949.53451477409 949.53340993586 38.287 2 -1.1330452353946512 0.3464146606219271 1.0 ['ENST00000262544.6_1_20:18488293-18488443:+|nuORF'] 14535 13561 DVAWTSQNL True PC9_epitope_Rep1 1032.4876241513198 1032.48652993586 57.018 2 -1.1330653005071527 0.3464357775904784 1.0 ['ENST00000295148.8_1_2:24253218-24253389:-|nuORF'] 37845 3301 HDPHVRHTWK True NCI_RA007_Epitope_Rep1 1311.65848650059 1311.65738993586 16.738 2 -1.1330786745929657 0.34643969964754556 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'nc|ENSG00000221866|Q9HCM2-4|PLXNA4'] 126840 19927 VPTALEKI True PC9_epitope_Rep1 869.52221875489 869.52112993586 81.468 2 -1.1330984155221215 0.34643969964754556 1.0 ['ENSG00000259431|ENST00000288014|THTPA'] 57835 11972 LEPYGTGLR True PC9_epitope_Rep2 1004.5290950404799 1004.52798993586 51.369 2 -1.1331937585451772 0.3464991252601872 1.0 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000590400.1_1_19:11303345-11305238:-|nuORF'] 19581 10734 ELREMIQLPG True PC9_epitope_Rep2 1184.6223438023198 1184.62124993586 46.607 2 -1.1332406232835404 0.34650696563788896 1.0 ['ENST00000579482.5_1_17:72859347-72866165:-|nuORF', 'nc|ENSG00000161513|P22570-4|FDXR', 'nc|ENSG00000161513|P22570-6|FDXR', 'nc|ENSG00000161513|P22570-5|FDXR', 'ENST00000577509.5_1_17:72858941-72868963:-|nuORF', 'nc|ENSG00000161513|P22570|FDXR', 'ENSG00000161513|ENST00000293195|FDXR', 'nc|ENSG00000161513|P22570-2|FDXR', 'nc|ENSG00000161513|P22570-7|FDXR', 'nc|ENSG00000161513|P22570-3|FDXR'] 5614 16848 APAARRTL True H1975_Epitope_Rep1 854.50863437942 854.50808496793 70.215 1 -1.1332473562521845 0.34650696563788896 1.0 ['ENSG00000165152|ENST00000374848|PGAP4'] 56179 6846 LDPACAADPWE True H1975_Epitope_Rep3 1186.49647458286 1186.49536993586 31.291 2 -1.1332524855268813 0.34650696563788896 1.0 ['nc|ENSG00000185186|P59037|LINC00313'] 68547 15609 LTWGRLRARSR True H1975_Epitope_Rep1 1370.8007340601798 1370.7996299358601 65.324 2 -1.133271048831518 0.34650696563788896 1.0 ['ENST00000503686.5_1_5:77860666-77944383:-|nuORF'] 131535 25410 VVVGVGLIVG True PC9_epitope_Rep3 910.5851533646199 910.5846049679301 103.17 1 -1.133314809792161 0.3465491923641703 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 27811 23541 FQFWLLLVSL True PC9_epitope_Rep2 1264.7219811905998 1264.72033490379 96.026 3 -1.1333174282752938 0.3465491923641703 1.0 ['ENST00000354416.7_1_X:118753384-118753732:-|nuORF'] 128961 15993 VSVNTWTP True PC9_epitope_Rep3 902.44978209062 902.44868993586 66.661 2 -1.1333273003509383 0.34655057958433333 1.0 ['ENST00000244051.2_1_20:49576777-49576906:+|nuORF'] 41228 9469 IADSPGHVF True H1975_Epitope_Rep3 941.46068112749 941.45958993586 41.426 2 -1.133407708684496 0.34655057958433333 1.0 ['ENSG00000274209|ENST00000620264|ANTXRL'] 4556 19140 AKVIRSLHGR True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 80.492 2 -1.1334089999220658 0.34655057958433333 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 113952 3891 TRKDKEESKKK True PC9_epitope_Rep4 1375.7783268497494 1375.77667490379 21.148 3 -1.1334192542762398 0.34655057958433333 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'nc|ENSG00000145241|Q03188-2|CENPC', 'ENST00000506410.1_1_4:68378087-68379960:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 64936 16723 LSCHCHSC True PC9_epitope_Rep5 888.3040635404002 888.30296993586 69.331 2 -1.1334229864291716 0.34655057958433333 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 604 7313 AASFSAAAA True PC9_epitope_Rep1 765.3657181134898 765.36462993586 32.943 2 -1.1334576335012088 0.34655057958433333 1.0 ['ENSG00000135334|ENST00000257787|AKIRIN2'] 15771 8145 EDEVNQDSVKK True NCI_RA007_Epitope_Rep2 1289.6099241119698 1289.60882993586 36.317 2 -1.1334582153310575 0.34655057958433333 1.0 ['ENSG00000163807|ENST00000296121|KIAA1143', 'ENST00000484437.1_1_3:44779222-44795794:-|nuORF'] 79016 12941 PFMYPPYLP True NCI_RA007_Epitope_Rep4 1123.5412399473098 1123.5401499358602 56.868 2 -1.133504464174698 0.34655057958433333 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 89862 5175 RFLQWTELLDP True H1975_Epitope_Rep3 1416.7401504358797 1416.73849490379 25.007 3 -1.1335069412941543 0.34655057958433333 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'ENST00000461438.5_1_10:120917240-120925159:-|nuORF'] 65573 13540 LSGGSTMF True NCI_RA007_Epitope_Rep1 798.3581902049 798.35764496793 56.675 1 -1.1336227243989008 0.34655057958433333 1.0 ['ENSG00000115091|ENST00000263238|ACTR3', 'nc|ENSG00000133627|Q9P1U1-2|ACTR3B', 'ENSG00000133627|ENST00000256001|ACTR3B'] 46293 14993 ITELGEYPEPP True PC9_epitope_Rep1 1243.5972341699496 1243.59612993586 62.49 2 -1.1336400984899844 0.34655057958433333 1.0 ['SOST|p.P38T|1|0.21|ENSG00000167941|chr17:43758630-43758630|G/T|missense_variant'] 90388 18933 RILFIVPIYAF True NCI_RA007_Epitope_Rep3 1350.8063795208998 1350.8047349037902 82.759 3 -1.1336508316844884 0.34655057958433333 1.0 ['ENST00000436674.5_1_22:38617478-38642853:-|nuORF', 'ENSG00000198792|ENST00000361906|TMEM184B'] 106300 4542 SVRGWKPR True NCI_RA007_Epitope_Rep4 984.5617325814399 984.56062993586 23.873 2 -1.133680134032237 0.34655057958433333 1.0 ['nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 97965 13907 SHRHRLTRWLW True H1975_Epitope_Rep1 1546.83818219806 1546.8370899358601 58.645 2 -1.133695186754583 0.34655057958433333 1.0 ['ENST00000264560.11_1_19:747626-748151:+|nuORF'] 127640 7775 VRDTQAVRHYK True H1975_Epitope_Rep3 1371.7371307441101 1371.7360299358602 34.891 2 -1.1337176599111025 0.34655057958433333 1.0 ['ENSG00000101213|ENST00000542869|PTK6'] 13698 6743 DQGGEWKHER True NCI_RA007_Epitope_Rep3 1240.5584976757998 1240.55740993586 33.614 2 -1.1337297597547586 0.34655057958433333 1.0 ['NRP2|p.G757E|2|0.6|ENSG00000118257|chr2:205763899-205763899|G/A|missense_variant'] 72560 4363 MVKKLPPVLL True PC9_epitope_Rep3 1136.7355230797598 1136.7344299358601 21.887 2 -1.133731163250135 0.34655057958433333 1.0 ['nc|ENSG00000125775|Q9H190-3|SDCBP2', 'ENSG00000125775|ENST00000360779|SDCBP2'] 63697 22858 LPQETRWHLWL True H1975_Epitope_Rep3 1477.78301830737 1477.78192993586 95.492 2 -1.1338775982582172 0.3466099855744067 1.0 ['ENST00000310942.8_1_17:77758954-77759245:+|nuORF'] 36184 6287 GVFLYEML True PC9_epitope_Rep5 970.4833907180199 970.48228993586 29.159 2 -1.1339179515247246 0.3466438583501417 1.0 ['ENSG00000067900|ENST00000399799|ROCK1', 'ENSG00000134318|ENST00000315872|ROCK2'] 125545 13575 VLWLRGEFL True PC9_epitope_Rep3 1131.64406522307 1131.64240490379 57.271 3 -1.1339526984158157 0.34664777369281047 1.0 ['C4BPB|p.W4Gfs*53|1|0.3|ENSG00000123843|chr1:207089535-207089535|T/-|frameshift_variant'] 23478 6583 EVYMYTHYY True H1975_Epitope_Rep2 1267.52196105471 1267.52032490379 30.232 3 -1.134019536124168 0.34664777369281047 1.0 ['ENST00000562757.5_1_16:66857380-66864856:-|nuORF'] 39655 2515 HPRWVLTAAHC True NCI_RA007_Epitope_Rep1 1289.64514493557 1289.64349490379 13.279 3 -1.1340455958215854 0.34665509362674396 1.0 ['ENST00000506153.5_1_16:2889871-2891732:-|nuORF', 'ENST00000475030.5_2_16:2889871-2891732:-|nuORF'] 78902 9742 PEVTIGAHQT True PC9_epitope_Rep1 1051.52982331647 1051.5287299358602 42.332 2 -1.1340760345466956 0.34665509362674396 1.0 ['ENSG00000130414|ENST00000252711|NDUFA10', 'nc|ENSG00000130414|O95299-2|NDUFA10'] 121779 23620 VGMKKLFKKE True PC9_epitope_Rep1 1206.71585026434 1206.71474993586 95.647 2 -1.1340770060931904 0.34665509362674396 1.0 ['nc|ENSG00000166153|Q8N2C3|DEPDC4', 'ENSG00000166153|ENST00000550587|DEPDC4'] 114681 20205 TSRYRSLKLK True NCI_RA007_Epitope_Rep2 1250.7459045226599 1250.74426490379 83.624 3 -1.1340875196613869 0.34665509362674396 1.0 ['ENSG00000171467|ENST00000361428|ZNF318'] 62183 10792 LLPLRPPGV True NCI_RA007_Epitope_Rep3 960.6120368187999 960.61092993586 49.493 2 -1.1341705726847835 0.34665509362674396 1.0 ['ENST00000339195.10_2_21:47706310-47706622:+|nuORF'] 100344 17133 SLMTSDDEHF True PC9_epitope_Rep5 1180.4706537578402 1180.4695499358602 70.924 2 -1.1341873569082757 0.34665509362674396 1.0 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|1|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|6'] 39101 6 HLCCDCDD True H1975_Epitope_Rep2 922.2619239449 922.26082993586 0.027143 2 -1.1341968136900031 0.34665509362674396 1.0 ['ENST00000497446.5_1_7:107334108-107335121:+|nuORF', 'ENST00000265715.7_1_7:107330615-107335121:+|nuORF', 'ENST00000480841.5_1_7:107333407-107335121:+|nuORF'] 81497 18633 PQQLWLVL True NCI_RA007_Epitope_Rep3 995.5804023373499 995.57930993586 81.526 2 -1.1342428439942445 0.34666343306443376 1.0 ['ENSG00000278619|ENST00000614766|MRM1'] 103215 24835 SQRKWKKQKI True NCI_RA007_Epitope_Rep1 1328.80408810512 1328.80298993586 102.8 2 -1.1343517011475546 0.34668453634565066 1.0 ['ENST00000589346.1_1_18:13666456-13666642:-|nuORF'] 78752 8172 PEGVIEHKV True H1975_Epitope_Rep3 1006.54474510462 1006.54364993586 36.413 2 -1.1344255248441126 0.34670563908814744 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'TTN|p.H3057Ifs*2|2|0.16|ENSG00000155657|chr2:178768151-178768151|A/-|frameshift_variant', 'TTN|p.P2078Qfs*61|1|0.14|ENSG00000155657|chr2:178775631-178775631|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 137032 4425 YKRISQVYKYI True NCI_RA007_Epitope_Rep2 1459.81873510975 1459.8170849037901 21.845 3 -1.1344477136543505 0.34671397756136163 1.0 ['ENST00000494248.1_1_7:77214868-77230160:+|nuORF'] 32922 5027 GIPMEDGP True NCI_RA007_Epitope_Rep5 814.3531048244599 814.35200993586 26.039 2 -1.134488290975484 0.3467223158217185 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 45924 11122 ISRWFEVERRE True H1975_Epitope_Rep3 1505.77391017565 1505.77280993586 47.876 2 -1.1346130897783446 0.3468072342978213 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 100747 16675 SLRLKFNL True PC9_epitope_Rep5 989.60220041109 989.60110993586 69.144 2 -1.1346595688498242 0.34682833439693683 1.0 ['nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A', 'ENSG00000198826|ENST00000361627|ARHGAP11A', 'nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A'] 67065 19474 LTAVIREDP True PC9_epitope_Rep2 1012.55530978832 1012.55420993586 80.286 2 -1.1347833024864016 0.3468621970364131 1.0 ['ENSG00000164512|ENST00000341048|ANKRD55'] 66441 11268 LSRPGWPYVP True PC9_epitope_Rep2 1170.61857875122 1170.61748993586 48.668 2 -1.1348071452279527 0.34687053297937515 1.0 ['ENST00000517346.1_1_5:167155718-167156009:+|nuORF'] 73598 19301 NGEQIIRRR True NCI_RA007_Epitope_Rep2 1140.64758746372 1140.64648993586 79.98 2 -1.1348447363921512 0.34690439421592023 1.0 ['nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'ENSG00000104447|ENST00000395715|TRPS1'] 128242 25688 VRVVVPGV True PC9_epitope_Rep2 823.5279728416698 823.5274249679301 104.52 1 -1.1349481242537798 0.34695101717844656 1.0 ['ENSG00000139531|ENST00000266971|SUOX'] 46292 15203 ITELCRDMF True H1975_Epitope_Rep3 1126.51510185246 1126.51400993586 63.881 2 -1.1350315048771997 0.3469676859461943 1.0 ['ENSG00000196072|ENST00000370372|BLOC1S2'] 55300 23675 LARLKFEKYFN True PC9_epitope_Rep5 1427.7925203619095 1427.7914299358602 96.044 2 -1.1350981028025269 0.3469676859461943 1.0 ['ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-2|UBA6'] 25262 5093 FEDFYRFMDNL True PC9_epitope_Rep2 1495.6442014457095 1495.6425449037902 24.967 3 -1.1350986517170685 0.34697159192424515 1.0 ['ENSG00000155970|ENST00000318063|MICU3'] 127188 4017 VQFVRMMK True NCI_RA007_Epitope_Rep4 1037.5514277915297 1037.5503299358602 21.707 2 -1.1351313378337349 0.34697159192424515 1.0 ['ENSG00000151500|ENST00000341541|THYN1'] 109432 6472 TGSALPDPQ True NCI_RA007_Epitope_Rep4 884.4239612655999 884.4234149679301 31.492 1 -1.1351437310728019 0.3469799257264641 1.0 ['ENSG00000173762|ENST00000312648|CD7'] 74894 7741 NLQTVNVDKN True H1975_Epitope_Rep3 1143.58840082175 1143.58730993586 34.758 2 -1.135296398204672 0.3470476384936384 1.0 ['ENST00000431088.1_1_2:223591487-223591550:+|nuORF'] 10744 7227 CWMIDADSRPK True H1975_Epitope_Rep3 1320.5954774314798 1320.5943699358602 32.77 2 -1.1352973322249136 0.3470476384936384 1.0 ['ENSG00000146648|ENST00000275493|EGFR', 'ENST00000485503.1_1_7:55266411-55268235:+|nuORF', 'nc|ENSG00000178568|Q15303-4|ERBB4', 'nc|ENSG00000178568|Q15303-3|ERBB4', 'nc|ENSG00000178568|Q15303-2|ERBB4', 'ENSG00000178568|ENST00000342788|ERBB4'] 70625 9724 MAKPFFRLQK True NCI_RA007_Epitope_Rep5 1264.71143359024 1264.71032993586 44.032 2 -1.1353633098100115 0.34709425486843115 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 126526 9169 VPNRVLAP True PC9_epitope_Rep6 864.5181364339599 864.51702993586 45.396 2 -1.1354264010199555 0.3471408700534691 1.0 ['ENSG00000189252|ENST00000370503|SPANXN3'] 98880 5897 SIVVFLRI True NCI_RA007_Epitope_Rep4 945.6011377819299 945.6000499358599 29.306 2 -1.1354653882077799 0.34714477126268106 1.0 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9', 'SLC12A9|p.G497Rfs*4|1|0.28|ENSG00000146828|chr7:100861535-100861536|-/A|frameshift_variant', 'ENST00000462106.1_1_7:100451807-100453521:+|nuORF'] 44933 8695 IQEHNEYYQYL True H1975_Epitope_Rep3 1498.6728587217 1498.67176993586 38.445 2 -1.1354745226486518 0.34714477126268106 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 133887 11578 WMWWRRNRRGK True H1975_Epitope_Rep1 1630.8527867163796 1630.8516899358601 49.521 2 -1.1355521215496673 0.34722523511171793 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3', 'ESYT3-RPN1|1|fusion'] 85628 21160 QLPLRVLIV True PC9_epitope_Rep3 1049.6961007959299 1049.69500993586 86.677 2 -1.1355573405153425 0.34722523511171793 1.0 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000470184.1_1_7:100179334-100179876:-|nuORF'] 63058 23509 LNKRRFTKT True PC9_epitope_Rep3 1162.6934750269797 1162.6923699358601 95.706 2 -1.1355874628083809 0.347233564720294 1.0 ['ENST00000361138.6_1_9:72967302-72967377:+|nuORF'] 101720 12272 SPGSSQCL True H1975_Epitope_Rep3 777.33270373305 777.33215496793 52.382 1 -1.1356692590375994 0.3472674144113106 1.0 ['nc|ENSG00000167302|Q96N21|TEPSIN', 'ENSG00000167302|ENST00000637944|TEPSIN', 'ENST00000574517.1_1_17:79210749-79211322:-|nuORF'] 127980 23864 VRPRVGLGT True H1975_Epitope_Rep2 953.5770482924099 953.57594993586 98.304 2 -1.1357137587446449 0.3473012632384841 1.0 ['ENST00000492581.5_1_22:21067427-21075805:-|nuORF'] 5243 20356 ALQHRPRLPRL True H1975_Epitope_Rep3 1355.8262205320298 1355.82457490379 85.115 3 -1.1357247336607381 0.34730959155810187 1.0 ['ENST00000323927.2_1_9:140077681-140079444:-|nuORF'] 51928 23360 KKSSGAGG True PC9_epitope_Rep2 690.3660524666599 690.3655049679301 95.329 1 -1.135737558758199 0.34731791966518655 1.0 ['ENSG00000110395|ENST00000264033|CBL'] 33903 8288 GLYHRPGP True PC9_epitope_Rep3 895.46643521427 895.46532993586 36.854 2 -1.135790140694026 0.3473251763865321 1.0 ['ENST00000487432.1_1_3:49449811-49450417:+|nuORF'] 106973 10606 SYLELLHIF True NCI_RA007_Epitope_Rep5 1133.6120963884498 1133.61046490379 47.434 3 -1.135838397288101 0.3473251763865321 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 56639 16114 LDYYWWLLFPV True NCI_RA007_Epitope_Rep2 1513.76457427857 1513.76346993586 67.404 2 -1.1358641185373044 0.3473251763865321 1.0 ['ENSG00000132874|ENST00000255226|SLC14A2'] 126058 13691 VPASTLAPV True NCI_RA007_Epitope_Rep5 853.4909186266099 853.49037496793 59.346 1 -1.1358674043515622 0.3473251763865321 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C'] 31737 12912 GEKPYKFMECG True PC9_epitope_Rep5 1287.56278032087 1287.56113490379 54.677 3 -1.1359118748870511 0.3473251763865321 1.0 ['ZNF202|p.C427F|1|0.08|ENSG00000166261|chr11:123726664-123726664|C/A|missense_variant'] 5711 17644 APASFPGER True PC9_epitope_Rep5 930.4559301002199 930.45482993586 72.879 2 -1.135919903637809 0.3473251763865321 1.0 ['ENST00000358022.4_1_9:25677387-25677690:-|nuORF'] 76361 13424 NSFNQLTVTLL True H1975_Epitope_Rep3 1248.67140216972 1248.6703099358601 56.906 2 -1.1359351531072184 0.3473251763865321 1.0 ['ENST00000482693.1_1_11:64540804-64545891:-|nuORF'] 120196 10479 VFLPLPSP True PC9_epitope_Rep5 868.50584041476 868.50474993586 45.294 2 -1.1359661825815828 0.34733350344475633 1.0 ['SKIL-FNDC3B|4|fusion', 'SKIL-FNDC3B|3|fusion', 'SKIL-FNDC3B|2|fusion', 'SKIL-FNDC3B|1|fusion', 'nc|ENSG00000136603|P12757-4|SKIL', 'nc|ENSG00000136603|P12757-2|SKIL', 'nc|ENSG00000136603|P12757-3|SKIL', 'nc|ENSG00000136603|P12757-5|SKIL', 'ENSG00000136603|ENST00000259119|SKIL'] 136300 14352 YGTSHVAI True NCI_RA007_Epitope_Rep4 846.42356734278 846.42246993586 62.512 2 -1.1360197465714248 0.34735458848445416 1.0 ['ENSG00000011376|ENST00000645846|LARS2'] 33956 7612 GNCNWFCE True PC9_epitope_Rep1 971.32657280679 971.32546993586 34.099 2 -1.1360396760921494 0.34735794657209196 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630'] 62686 7916 LLWLSFEYLWP True NCI_RA007_Epitope_Rep1 1465.7645742785699 1465.76293490379 34.785 3 -1.136066744194149 0.34735794657209196 1.0 ['ENST00000422090.2_1_19:50411206-50411455:-|nuORF'] 88690 7012 RCKIYFLLQHN True NCI_RA007_Epitope_Rep3 1433.76017468781 1433.75851490379 34.695 3 -1.136073721282145 0.34735794657209196 1.0 ['ENST00000358517.6_1_6:151162047-151162251:+|nuORF'] 114696 20879 TSSKGKKGKK True PC9_epitope_Rep6 1047.6400424717897 1047.63947496793 93.085 1 -1.136079712233726 0.34735794657209196 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 81979 19568 PSRVLEPQL True PC9_epitope_Rep5 1037.58694426977 1037.58584993586 80.319 2 -1.1360919491252108 0.34735794657209196 1.0 ['GALNT11|p.F71L|1|0.12|ENSG00000178234|chr7:152094440-152094440|C/G|missense_variant'] 110123 13754 TIARSLPTTV True PC9_epitope_Rep2 1057.61315901761 1057.61206993586 58.191 2 -1.1361616491035182 0.34737406079779565 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1'] 12990 8764 DLQDPIVCL True H1975_Epitope_Rep3 1014.50558271458 1014.50448993586 38.717 2 -1.1362416802117834 0.34737406079779565 1.0 ['nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-10|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-8|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-7|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-6|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-4|ADGRG2'] 4194 12197 AIDMYLRKR True H1975_Epitope_Rep1 1164.6437479532399 1164.6426499358602 51.935 2 -1.1362634120846282 0.34737406079779565 1.0 ['nc|ENSG00000105639|P52333-2|JAK3', 'ENSG00000105639|ENST00000458235|JAK3'] 48080 4443 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 22.102 3 -1.1362680476044562 0.34737406079779565 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 72559 4119 MVKKLPPVLL True PC9_epitope_Rep3 1136.7355230797598 1136.7344299358601 20.965 2 -1.136309399200023 0.34737406079779565 1.0 ['nc|ENSG00000125775|Q9H190-3|SDCBP2', 'ENSG00000125775|ENST00000360779|SDCBP2'] 121926 9705 VGPPLLTP True NCI_RA007_Epitope_Rep5 792.4745402864801 792.47344993586 43.965 2 -1.136355636169381 0.34740789876518013 1.0 ['ENSG00000104941|ENST00000221538|RSPH6A'] 119289 10930 VELKPHDVR True PC9_epitope_Rep6 1091.60874234351 1091.60764993586 52.91 2 -1.1363797693372706 0.3474162233872922 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 120692 5918 VGAQGQIF True PC9_epitope_Rep5 818.4286527232199 818.42754993586 27.756 2 -1.136435813653687 0.3474456279099432 1.0 ['nc|ENSG00000131828|P08559-3|PDHA1'] 33553 10184 GLKEEKGLP True PC9_epitope_Rep5 969.5494961318898 969.54838993586 44.16 2 -1.1364665193724823 0.3474456279099432 1.0 ['nc|ENSG00000138892|A6PVC2|TTLL8', 'ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 98439 24572 SIITYKLLTKK True NCI_RA007_Epitope_Rep5 1306.8224235078599 1306.8213299358601 101.99 2 -1.13650644863455 0.3474495197520313 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 87260 8497 QSRQDVLEKYY True H1975_Epitope_Rep3 1427.70449320315 1427.70338993586 37.669 2 -1.1365235171917774 0.3474495197520313 1.0 ['ENSG00000172817|ENST00000310193|CYP7B1'] 22681 18627 ETTKRKFRK True H1975_Epitope_Rep2 1192.7040397106796 1192.70239490379 77.31 3 -1.136578160745237 0.3474534113955535 1.0 ['EFCAB5|p.K736Rfs*16|1|0.7|ENSG00000176927|chr17:30055895-30055895|A/-|frameshift_variant'] 98780 9718 SISPLLFEESP True H1975_Epitope_Rep2 1217.61796961453 1217.61631490379 42.366 3 -1.1365807972572441 0.3474534113955535 1.0 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK', 'ENST00000508867.5_1_5:74842847-74877278:+|nuORF', 'ENST00000506928.5_1_5:74842847-74879138:+|nuORF'] 137933 20838 YPSIITNLFV True PC9_epitope_Rep2 1165.6383111362902 1165.63720993586 85.599 2 -1.1367384677305408 0.3475382653061225 1.0 ['OR56A1|p.Q142L|1|0.34|ENSG00000180934|chr11:6027268-6027268|T/A|missense_variant'] 97506 14938 SGPPIVIRDSP True PC9_epitope_Rep6 1136.61897267404 1136.6178699358602 69.461 2 -1.1368502034375876 0.3475699182533509 1.0 ['nc|nan|Q6ZRI6-2|C15orf39', 'ENSG00000167173|ENST00000394987|C15orf39'] 112344 23278 TMRPYIQEQ True NCI_RA007_Epitope_Rep5 1164.5597435457598 1164.55810490379 96.82 3 -1.136869074796148 0.3475699182533509 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 34057 17290 GNRHARRV True NCI_RA007_Epitope_Rep5 964.54272847236 964.54162993586 73.279 2 -1.1368691401480522 0.3475699182533509 1.0 ['nc|ENSG00000161642|Q96PM9-2|ZNF385A', 'nc|ENSG00000161642|Q96PM9-3|ZNF385A', 'ENST00000552382.5_1_12:54764042-54772879:-|nuORF', 'ENSG00000161642|ENST00000394313|ZNF385A', 'nc|ENSG00000161642|Q96PM9|ZNF385A'] 41413 7144 IASILYYYFLM True H1975_Epitope_Rep1 1395.71484720483 1395.71374993586 32.504 2 -1.1368785698039465 0.3475699182533509 1.0 ['TMEM168|p.S86L|1|0.27|ENSG00000146802|chr7:112784569-112784569|G/A|missense_variant'] 99415 12801 SLEETDCYRV True H1975_Epitope_Rep2 1213.52850298713 1213.52740993586 54.345 2 -1.1369355399589196 0.3475699182533509 1.0 ['nc|ENSG00000135424|Q13683-9|ITGA7', 'ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7', 'ENST00000554359.1_1_12:56096799-56101466:-|nuORF', 'ENST00000554724.5_1_12:56094596-56105857:-|nuORF'] 99733 5129 SLGIEREVP True PC9_epitope_Rep1 998.53965972418 998.53856993586 24.581 2 -1.1369544792395088 0.3475699182533509 1.0 ['ENSG00000106648|ENST00000392800|GALNTL5', 'nc|ENSG00000106648|Q7Z4T8-2|GALNTL5'] 136220 7557 YGNEQTASFAP True PC9_epitope_Rep5 1183.51456717515 1183.51346993586 34.017 2 -1.136961723287337 0.3475699182533509 1.0 ['ENSG00000120094|ENST00000239174|HOXB1', 'nc|ENSG00000120094|P14653-2|HOXB1'] 101450 1568 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 8.7805 2 -1.136980669109838 0.3475699182533509 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 459 8371 AALVHSDD True PC9_epitope_Rep5 826.38209645362 826.38098993586 37.141 2 -1.1369900371393034 0.3475699182533509 1.0 ['ENST00000506951.5_1_4:20711306-20720453:+|nuORF', 'nc|ENSG00000163138|Q8N7B6-2|PACRGL', 'ENSG00000163138|ENST00000503585|PACRGL', 'nc|ENSG00000163138|Q8N7B6-4|PACRGL'] 117320 7624 VAAKKAGL True NCI_RA007_Epitope_Rep5 756.4857736765199 756.48466993586 36.024 2 -1.1369915290452086 0.3475699182533509 1.0 ['SH3TC1|p.G548V|1|0.31|ENSG00000125089|chr4:8227337-8227337|G/T|missense_variant'] 6043 7546 APLTLLPAVP True NCI_RA007_Epitope_Rep4 990.6113681124599 990.61026993586 35.67 2 -1.1369934725532624 0.3475699182533509 1.0 ['ENST00000526084.1_1_11:7687117-7687363:-|nuORF'] 74991 7261 NLWKCNCHL True PC9_epitope_Rep4 1129.51610491197 1129.51444490379 35.24 3 -1.1370059933359447 0.3475699182533509 1.0 ['ENSG00000144771|ENST00000273286|LRTM1', 'nc|ENSG00000144771|Q9HBL6-2|LRTM1'] 103506 14268 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 61.575 2 -1.1370293520319732 0.3475699182533509 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 2695 4700 AETEKRCAL True H1975_Epitope_Rep2 1019.5069796969099 1019.50588993586 23.171 2 -1.137069366620738 0.3475909914045961 1.0 ['ENST00000575955.1_1_17:4120189-4167236:-|nuORF', 'ENSG00000185722|ENST00000341657|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-2|ANKFY1', 'nc|ENSG00000185722|Q9P2R3-4|ANKFY1', 'ENST00000570934.5_1_17:4098183-4145738:-|nuORF'] 71407 14810 MIKEFRATL True PC9_epitope_Rep4 1107.61105084263 1107.6099499358602 64.905 2 -1.1371184695787817 0.34760763109569476 1.0 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C', 'ENST00000493027.5_1_1:45205556-45221765:+|nuORF'] 137578 15419 YLSPTFKEF True NCI_RA007_Epitope_Rep5 1130.56481184286 1130.56370993586 66.012 2 -1.1371792611472626 0.34760763109569476 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1'] 81004 13400 PNQPIMPMVTQ True PC9_epitope_Rep5 1254.6100648664599 1254.60841490379 56.56 3 -1.1371905635697581 0.34761595062295164 1.0 ['ENSG00000204131|ENST00000633930|NHSL2', 'nc|ENSG00000204131|Q5HYW2-2|NHSL2'] 115438 6837 TVFFILRKK True H1975_Epitope_Rep1 1150.7226498969399 1150.72099490379 31.342 3 -1.1373008317931255 0.34762706245377806 1.0 ['ENSG00000118402|ENST00000369816|ELOVL4'] 111281 14685 TLHEHFRLL True PC9_epitope_Rep1 1164.64037682496 1164.63874490379 61.307 3 -1.137302530614547 0.34762706245377806 1.0 ['ADGRG7|p.R772H|1|0.15|ENSG00000144820|chr3:100694922-100694922|G/A|missense_variant'] 59266 9882 LGGRKLQPLP True H1975_Epitope_Rep3 1077.66586329681 1077.66476993586 43.042 2 -1.1373227308601088 0.34762706245377806 1.0 ['ENST00000267984.3_1_15:81294113-81294617:+|nuORF'] 3540 15898 AGLYKENLL True PC9_epitope_Rep5 1019.5651461960299 1019.56404993586 66.142 2 -1.1373513695136115 0.34762706245377806 1.0 ['ENSG00000206190|ENST00000555815|ATP10A'] 57209 6667 LEEWGRGLS True PC9_epitope_Rep1 1045.5192586327698 1045.5181699358602 30.449 2 -1.137369612567229 0.34762706245377806 1.0 ['ENST00000373783.2_1_10:64565867-64565909:+|nuORF'] 36067 15597 GVDYPRPIV True PC9_epitope_Rep2 1014.5498304850598 1014.54872993586 65.271 2 -1.1373843437047582 0.34762706245377806 1.0 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2'] 68342 5174 LTSEKDPL True PC9_epitope_Rep1 901.4756624852898 901.47456993586 24.754 2 -1.1374463818935348 0.34762706245377806 1.0 ['ENSG00000204406|ENST00000642680|MBD5', 'nc|ENSG00000204406|Q9P267|MBD5', 'nc|ENSG00000204406|Q9P267-2|MBD5'] 129635 8528 VTHFYPLMGV True PC9_epitope_Rep1 1162.58450174162 1162.58284490379 37.64 3 -1.1374465624571481 0.34762706245377806 1.0 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 85094 5122 QIQRNVIVI True NCI_RA007_Epitope_Rep2 1081.6607779163699 1081.6596899358601 24.546 2 -1.1374647951726107 0.34762706245377806 1.0 ['nc|ENSG00000165568|Q96JD6-4|AKR1E2', 'ENSG00000165568|ENST00000298375|AKR1E2', 'nc|ENSG00000165568|Q96JD6-5|AKR1E2', 'nc|ENSG00000165568|Q96JD6-3|AKR1E2', 'nc|ENSG00000165568|Q96JD6-2|AKR1E2', 'ENST00000525281.5_1_10:4868459-4888008:+|nuORF'] 87195 19267 QSLKGLRNRAS True NCI_RA007_Epitope_Rep5 1228.7000169594 1228.6983749037902 80.975 3 -1.1376244194309348 0.3476736328050289 1.0 ['nc|ENSG00000172349|Q14005-2|IL16', 'ENSG00000172349|ENST00000683961|IL16', 'nc|ENSG00000172349|Q14005-3|IL16', 'nc|ENSG00000172349|Q14005-4|IL16'] 6519 20866 APVAAAALA True PC9_epitope_Rep4 753.43848913093 753.43738993586 88.415 2 -1.1376748978805051 0.34771356815950843 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 94173 17426 RWLEKEERFLK True PC9_epitope_Rep6 1532.8463468399198 1532.84470490379 79.644 3 -1.1376989046173698 0.34771356815950843 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 30974 5585 GATAALVQWPD True H1975_Epitope_Rep3 1127.56112344475 1127.56002993586 26.523 2 -1.1377257044221847 0.34771356815950843 1.0 ['ENSG00000126243|ENST00000246529|LRFN3'] 75086 1859 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 10.214 3 -1.137737108128001 0.34771356815950843 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 107498 10034 TAALGTGWE True H1975_Epitope_Rep2 904.42904664604 904.4279499358599 43.587 2 -1.1377791926366323 0.34771356815950843 1.0 ['nc|ENSG00000167528|Q96N77-2|ZNF641', 'nc|ENSG00000167528|Q96N77-3|ZNF641', 'ENSG00000167528|ENST00000547026|ZNF641', 'nc|ENSG00000167528|Q96N77|ZNF641'] 21990 8659 ESMTLTGLPNH True PC9_epitope_Rep5 1198.5652228490198 1198.5641299358601 38.25 2 -1.137790558314342 0.34771356815950843 1.0 ['ENSG00000163840|ENST00000296161|DTX3L'] 98438 23689 SIITYKLLTKK True NCI_RA007_Epitope_Rep4 1306.8224235078599 1306.8213299358601 102.73 2 -1.1378019083527608 0.34771356815950843 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 85400 23441 QLEGLLSECL True PC9_epitope_Rep1 1103.55326118299 1103.55267496793 94.949 1 -1.1378190189032438 0.34771356815950843 1.0 ['ENST00000583601.1_1_17:30367683-30367950:+|nuORF'] 77535 13489 NYQVNTLSI True PC9_epitope_Rep4 1050.5345743437401 1050.53346993586 59.782 2 -1.1378627102296852 0.34771356815950843 1.0 ['ENST00000490277.1_1_13:45913571-45913754:-|nuORF'] 31271 21487 GDSCSWGG True PC9_epitope_Rep1 767.2544534123499 767.25334993586 87.493 2 -1.1378640547063072 0.34771356815950843 1.0 ['nc|ENSG00000177752|Q8N8F6-5|YIPF7'] 78144 5015 PAPLRAAPA True PC9_epitope_Rep6 862.5024863698198 862.50138993586 26.914 2 -1.1379062506968507 0.34771356815950843 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 45375 11878 ISDNAARVL True PC9_epitope_Rep1 957.52434401321 957.52324993586 50.554 2 -1.1379361047467356 0.34771356815950843 1.0 ['nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 5916 7726 APHPFGVP True H1975_Epitope_Rep2 820.4231734199599 820.42206993586 34.671 2 -1.1379701752993272 0.34771356815950843 1.0 ['ENSG00000170345|ENST00000303562|FOS', 'nc|ENSG00000170345|P01100-3|FOS'] 12883 23792 DLLPLSLIPV True PC9_epitope_Rep2 1078.66379760814 1078.6627099358602 96.988 2 -1.1379752840506059 0.34771356815950843 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2', 'PAN2|p.R449Qfs*16|1|0.09|ENSG00000135473|chr12:56326327-56326328|-/G|frameshift_variant'] 60239 10641 LIDRQVTV True PC9_epitope_Rep2 942.5498304850599 942.54872993586 46.244 2 -1.138146935687811 0.3478238698656332 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 123810 8715 VITYRASP True PC9_epitope_Rep1 905.49706663621 905.49596993586 38.36 2 -1.138169841138872 0.34783218387874 1.0 ['ENST00000538137.6_1_18:22930939-22932115:-|nuORF', 'ENST00000361524.7_1_18:22902141-22932115:-|nuORF', 'ENST00000583005.5_1_18:22902106-22932121:-|nuORF'] 18530 3502 EKRMEEWDRYP True NCI_RA007_Epitope_Rep2 1537.6983622768898 1537.69672490379 18.273 3 -1.138208824323055 0.34785269035144745 1.0 ['ENSG00000102302|ENST00000375135|FGD1'] 102162 13857 SPRPWRPHWWR True NCI_RA007_Epitope_Rep1 1559.8010684133499 1559.7999699358602 57.919 2 -1.1382493594228331 0.34785269035144745 1.0 ['ENST00000366955.7_1_1:214819175-214819226:+|nuORF'] 120222 22439 VFMVVILP True PC9_epitope_Rep3 916.5455970517598 916.54448993586 91.587 2 -1.1382984458144945 0.34785269035144745 1.0 ['ENSG00000165548|ENST00000298351|TMEM63C'] 100260 8100 SLLRDQDP True H1975_Epitope_Rep3 942.4770594676199 942.47596993586 36.13 2 -1.1383090460581244 0.34785269035144745 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000484201.5_1_1:114440516-114447658:-|nuORF'] 40903 24751 HVSLPLHA True NCI_RA007_Epitope_Rep1 872.48683630568 872.48572993586 102.48 2 -1.138327149218812 0.34786100346726495 1.0 ['ENSG00000163867|ENST00000357182|ZMYM6', 'nc|ENSG00000163867|O95789-5|ZMYM6', 'ENST00000493328.5_1_1:35452707-35454621:-|nuORF'] 136880 14328 YIYIRGEFYNE True H1975_Epitope_Rep1 1465.6877805098495 1465.6866899358602 60.302 2 -1.1383724584405117 0.3478776290630975 1.0 ['ENST00000526770.5_1_11:67376014-67378079:+|nuORF', 'ENST00000528377.1_1_11:67375903-67377304:+|nuORF', 'ENST00000526169.1_1_11:67376170-67379399:+|nuORF', 'ENST00000524838.5_1_11:67374453-67377304:+|nuORF', 'nc|ENSG00000167792|P49821-2|NDUFV1', 'ENSG00000167792|ENST00000322776|NDUFV1'] 58791 12656 LFPHYPVFL True PC9_epitope_Rep1 1131.6117024656298 1131.61006490379 53.55 3 -1.1383821759372668 0.3478776290630975 1.0 ['ENST00000372491.3_1_9:131937866-131938148:-|nuORF'] 74008 10287 NHQLNVVI True PC9_epitope_Rep6 935.51886470995 935.51776993586 50.257 2 -1.1383966465018411 0.347881507163616 1.0 ['ENST00000466697.1_1_1:20216953-20224263:+|nuORF', 'ENSG00000169914|ENST00000375120|OTUD3'] 63122 15888 LNPLVRQL True PC9_epitope_Rep5 951.5865503469499 951.5860049679301 66.103 1 -1.1383993435418684 0.347881507163616 1.0 ['WNK2|p.S2101Rfs*23|1|0.26|ENSG00000165238|chr9:93300126-93300127|GT/-|frameshift_variant', 'ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2'] 131275 4484 VVQLLLKPVL True PC9_epitope_Rep1 1120.7583666993198 1120.7572699358602 22.131 2 -1.1384502696880001 0.34791419722402783 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 112514 21097 TPAAAAAAAA True PC9_epitope_Rep5 784.40791727864 784.40682993586 86.213 2 -1.1384826263953105 0.34791419722402783 1.0 ['nc|ENSG00000049540|P15502-11|ELN', 'nc|ENSG00000049540|P15502-8|ELN', 'nc|ENSG00000049540|P15502-7|ELN', 'nc|ENSG00000049540|P15502-6|ELN', 'nc|ENSG00000049540|P15502-12|ELN', 'nc|ENSG00000049540|P15502-13|ELN', 'nc|ENSG00000049540|P15502-5|ELN', 'ENSG00000049540|ENST00000252034|ELN', 'nc|ENSG00000049540|P15502-1|ELN', 'nc|ENSG00000049540|P15502-4|ELN', 'nc|ENSG00000049540|P15502-10|ELN', 'nc|ENSG00000049540|P15502|ELN', 'nc|ENSG00000049540|P15502-9|ELN', 'ZIC2|p.S454T|1|0.33|ENSG00000043355|chr13:99985443-99985443|T/A|missense_variant'] 65464 7433 LSFEYVWE True PC9_epitope_Rep4 1071.49131254943 1071.49020993586 35.941 2 -1.1384827817343388 0.34791419722402783 1.0 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 38895 3371 HIINADAKY True NCI_RA007_Epitope_Rep2 1043.53999407735 1043.5388899358602 17.772 2 -1.1385340865855187 0.34791419722402783 1.0 ['ENSG00000153822|ENST00000392671|KCNJ16'] 64916 17121 LSCHCHSC True PC9_epitope_Rep1 888.3040635404002 888.30296993586 70.68 2 -1.1385526626324727 0.34791419722402783 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 127860 16831 VRNIKHGA True NCI_RA007_Epitope_Rep1 893.5195334162901 893.51842993586 69.598 2 -1.138569390784978 0.34791419722402783 1.0 ['ENST00000439704.1_1_7:63369621-63370485:-|nuORF'] 29686 13952 FVNMISFMPK True H1975_Epitope_Rep2 1212.6035229340398 1212.60187490379 58.815 3 -1.1385777370352879 0.34791419722402783 1.0 ['ENST00000463718.5_1_12:21428225-21457481:-|nuORF', 'nc|ENSG00000084453|P46721-2|SLCO1A2', 'ENSG00000084453|ENST00000683939|SLCO1A2', 'SLCO1A2|p.Y342N|1|0.34|ENSG00000084453|chr12:21297455-21297455|A/T|missense_variant'] 27793 6191 FQEGM[Oxidation]LEKHE True H1975_Epitope_Rep3 1262.5601378490198 1262.55904993586 28.826 2 -1.138640011308979 0.34792970293244296 1.0 ['nc|ENSG00000144893|Q86YW9-4|MED12L', 'nc|ENSG00000144893|Q86YW9|MED12L', 'ENSG00000144893|ENST00000687756|MED12L', 'nc|ENSG00000144893|Q86YW9-2|MED12L', 'nc|ENSG00000144893|Q86YW9-3|MED12L'] 71408 24089 MIKTAKKSFVV True PC9_epitope_Rep3 1250.74206501218 1250.74042490379 97.943 3 -1.138655400551115 0.34792970293244296 1.0 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 59982 15924 LHPKIVNLL True PC9_epitope_Rep6 1045.66480066765 1045.6637099358602 73.539 2 -1.138681467980256 0.34792970293244296 1.0 ['COL6A3|p.Q1008K|1|0.34|ENSG00000163359|chr2:237376820-237376820|G/T|missense_variant'] 41318 11452 IAIYQRKVE True PC9_epitope_Rep3 1118.64479349906 1118.64368993586 49.048 2 -1.1386821787952153 0.34792970293244296 1.0 ['nc|ENSG00000072062|P17612-2|PRKACA', 'ENSG00000072062|ENST00000308677|PRKACA', 'nc|ENSG00000142875|P22694-10|PRKACB', 'nc|ENSG00000142875|P22694-4|PRKACB', 'nc|ENSG00000142875|P22694-3|PRKACB', 'nc|ENSG00000142875|P22694|PRKACB', 'nc|ENSG00000142875|P22694-5|PRKACB', 'nc|ENSG00000142875|P22694-7|PRKACB', 'nc|ENSG00000142875|P22694-6|PRKACB', 'nc|ENSG00000142875|P22694-9|PRKACB', 'ENSG00000142875|ENST00000370685|PRKACB'] 103497 10899 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 48.563 2 -1.1387031151496119 0.34792970293244296 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 25328 9515 FEETLTGFK True PC9_epitope_Rep3 1070.5284263341398 1070.52732993586 41.546 2 -1.1387217304223984 0.34792970293244296 1.0 ['ENSG00000169299|ENST00000381967|PGM2', 'nc|ENSG00000169299|Q96G03-2|PGM2', 'ENST00000505986.5_1_4:37841281-37848924:+|nuORF'] 98659 13250 SIPTERYFF True NCI_RA007_Epitope_Rep3 1158.57095985246 1158.5698699358602 59.395 2 -1.1388025084314795 0.34792970293244296 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 133740 23915 WLLFSWHH True H1975_Epitope_Rep3 1124.5555845718402 1124.5544899358601 99.703 2 -1.1388129394410473 0.34792970293244296 1.0 ['ENST00000330574.2_1_11:62416811-62416880:-|nuORF'] 8650 12764 AVAQFKKY True PC9_epitope_Rep6 953.5334521449299 953.53234993586 60.59 2 -1.1388758329316748 0.34795906663778053 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 74362 19184 NISLEGKTNF True PC9_epitope_Rep3 1121.57168812845 1121.5705899358602 79.009 2 -1.1388764815051824 0.34795906663778053 1.0 ['nc|ENSG00000048392|Q7LG56-2|RRM2B', 'ENSG00000048392|ENST00000251810|RRM2B', 'nc|ENSG00000048392|Q7LG56-6|RRM2B', 'nc|ENSG00000048392|Q7LG56-3|RRM2B', 'nc|ENSG00000048392|Q7LG56-4|RRM2B', 'ENSG00000171848|ENST00000304567|RRM2', 'nc|ENSG00000171848|P31350-2|RRM2'] 2934 19864 AFFRKADGRE True PC9_epitope_Rep4 1195.60980497267 1195.6087099358601 84.537 2 -1.1389033123308152 0.3479801197910029 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1', 'nc|ENSG00000177103|Q8TD84-2|DSCAML1'] 36046 8877 GVDVNSQNEVN True H1975_Epitope_Rep1 1173.52619448801 1173.52508993586 39.057 2 -1.138947681581003 0.3479839942909573 1.0 ['ENSG00000154945|ENST00000285243|ANKRD40', 'ENST00000507114.1_1_17:48777854-48785015:-|nuORF'] 58869 11188 LFSLQKEELR True PC9_epitope_Rep3 1261.70303665117 1261.70140490379 48.04 3 -1.138950191849853 0.3479839942909573 1.0 ['ENSG00000131037|ENST00000201647|EPS8L1', 'nc|ENSG00000131037|Q8TE68-4|EPS8L1', 'ENST00000589362.5_1_19:55593317-55598979:+|nuORF', 'nc|ENSG00000131037|Q8TE68-2|EPS8L1', 'ENST00000587715.1_1_19:55598611-55598979:+|nuORF'] 33435 7420 GLGGVMAQA True H1975_Epitope_Rep3 802.4007237232198 802.4001749679301 33.519 1 -1.139002401101306 0.34798674821610603 1.0 ['ENSG00000109927|ENST00000392793|TECTA'] 118036 9206 VATEEMEK True H1975_Epitope_Rep2 935.4269980407099 935.42644496793 40.364 1 -1.139007454607915 0.34798674821610603 1.0 ['ENST00000506725.1_1_5:36608525-36613071:+|nuORF'] 23039 23156 EVKMIFLRK True PC9_epitope_Rep5 1162.6896355164997 1162.68852993586 94.058 2 -1.139023170961059 0.34798674821610603 1.0 ['L1ME3G_dup9716|chrX:131361372-131362238:-|1.162874050545019|0.102023693220256|3.51|470.0|1|1|sense'] 131281 4351 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 21.843 2 -1.139033425447398 0.34798674821610603 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 60452 20400 LILIFEWWYFR True H1975_Epitope_Rep1 1584.8493069620401 1584.84820993586 84.841 2 -1.1390371502694305 0.34798674821610603 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF', 'nc|ENSG00000004866|Q9NRC1-5|ST7', 'nc|ENSG00000004866|Q9NRC1-3|ST7', 'nc|ENSG00000004866|Q9NRC1-2|ST7', 'nc|ENSG00000004866|Q9NRC1-7|ST7', 'nc|ENSG00000004866|Q9NRC1-6|ST7'] 21883 4575 ESEPLAGTK True NCI_RA007_Epitope_Rep4 930.4658260775799 930.46472993586 24.003 2 -1.1390507865108803 0.34798674821610603 1.0 ['ENST00000445604.6_1_9:66553265-66553673:-|nuORF', 'ENSG00000283886|ENST00000622735|unknown'] 36351 11370 GVHGACVL True NCI_RA007_Epitope_Rep5 754.37959435582 754.37848993586 50.385 2 -1.1390737339606807 0.34798674821610603 1.0 ['ENST00000570989.1_1_17:48141869-48142148:+|nuORF', 'ENST00000508100.1_1_17:48133863-48142148:+|nuORF'] 101449 1434 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 8.027 2 -1.1390877198563027 0.34798674821610603 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 98437 24827 SIITYKLLTKK True NCI_RA007_Epitope_Rep1 1306.8224235078599 1306.8213299358601 102.77 2 -1.139177396954696 0.3480161056038327 1.0 ['ENST00000371313.2_1_X:119760861-119760927:-|nuORF'] 134578 20504 WVVFIVVV True PC9_epitope_Rep6 959.5844250886298 959.58332993586 91.599 2 -1.139259713970495 0.3480161056038327 1.0 ['ENSG00000140675|ENST00000330498|SLC5A2'] 108265 5823 TEAPRLSSGN True H1975_Epitope_Rep3 1030.50433684462 1030.5032299358602 27.418 2 -1.1393044636880727 0.3480537682359687 1.0 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7', 'nc|ENSG00000184313|Q68CQ1-4|MROH7', 'nc|ENSG00000184313|Q68CQ1-8|MROH7'] 79199 7066 PGFDGAGG True PC9_epitope_Rep4 676.2816541363599 676.2811049679301 34.445 1 -1.1393085122528959 0.3480537682359687 1.0 ['ENSG00000188153|ENST00000328300|COL4A5', 'nc|ENSG00000188153|P29400|COL4A5'] 121187 10480 VGGLGAGG True H1975_Epitope_Rep1 586.30747496138 586.3069249679301 45.266 1 -1.1393136876081191 0.3480537682359687 1.0 ['ENSG00000185915|ENST00000379499|KLHL34'] 133724 23863 WLKKILLLL True NCI_RA007_Epitope_Rep5 1138.7841875243398 1138.78308993586 99.158 2 -1.139363832334771 0.3480698178111861 1.0 ['ENST00000433031.1_1_7:57216973-57217525:-|nuORF'] 99430 12533 SLEHLEQLAQY True H1975_Epitope_Rep1 1329.65648038157 1329.65538993586 53.252 2 -1.1394131037152977 0.3480698178111861 1.0 ['ENSG00000186150|ENST00000334179|UBL4B'] 78742 7980 PEGLREAGKK True NCI_RA007_Epitope_Rep1 1083.6036569630699 1083.60254993586 35.033 2 -1.1394500992714098 0.3480698178111861 1.0 ['ENST00000253048.9_1_19:47597719-47615690:-|nuORF', 'ENST00000597069.1_1_19:47597719-47614164:-|nuORF'] 107909 16498 TAVLSALKGL True PC9_epitope_Rep5 971.60153170475 971.60042993586 68.458 2 -1.1394555794086008 0.3480698178111861 1.0 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'ENST00000467978.1_1_2:37268272-37283611:-|nuORF'] 19582 10824 ELREMIQLPG True PC9_epitope_Rep2 1184.6223438023198 1184.62124993586 46.953 2 -1.139500149577511 0.3480698178111861 1.0 ['ENST00000579482.5_1_17:72859347-72866165:-|nuORF', 'nc|ENSG00000161513|P22570-4|FDXR', 'nc|ENSG00000161513|P22570-6|FDXR', 'nc|ENSG00000161513|P22570-5|FDXR', 'ENST00000577509.5_1_17:72858941-72868963:-|nuORF', 'nc|ENSG00000161513|P22570|FDXR', 'ENSG00000161513|ENST00000293195|FDXR', 'nc|ENSG00000161513|P22570-2|FDXR', 'nc|ENSG00000161513|P22570-7|FDXR', 'nc|ENSG00000161513|P22570-3|FDXR'] 15976 7510 EDWRRPLEEDW True NCI_RA007_Epitope_Rep1 1529.6899057681699 1529.68825490379 33.205 3 -1.1395885629724711 0.34811190949396115 1.0 ['ENSG00000183808|ENST00000520560|RBM12B'] 46326 6426 ITFLDCLLH True NCI_RA007_Epitope_Rep1 1073.55795264061 1073.55684993586 29.019 2 -1.1395891640738496 0.34811190949396115 1.0 ['ENST00000461434.1_1_1:151227258-151234901:+|nuORF'] 96421 12142 SEIEILAVDLP True H1975_Epitope_Rep1 1197.6492697428098 1197.64816993586 51.721 2 -1.1396038047482233 0.34812021454142406 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 22179 15065 ETDAQRHRLLV True NCI_RA007_Epitope_Rep1 1336.7211463268 1336.72004993586 62.667 2 -1.1396368759051332 0.34815399903177313 1.0 ['PCDHA7|p.P643Q|1|0.06|ENSG00000204963|chr5:140836311-140836311|C/A|missense_variant'] 55216 16298 LAPRCTLSRPC True PC9_epitope_Rep2 1215.62163260967 1215.61999490379 67.935 3 -1.1396495344559137 0.3481623033314224 1.0 ['nc|ENSG00000164972|Q8NCR6-2|SPMIP6'] 63918 14412 LPWARELESRE True PC9_epitope_Rep1 1384.70991293676 1384.70880993586 60.259 2 -1.1396799460387055 0.34817060741948636 1.0 ['ENST00000503119.5_1_3:126499264-126676457:+|nuORF'] 61242 7190 LLDQHMLKVHY True NCI_RA007_Epitope_Rep2 1395.73329123363 1395.73218993586 32.588 2 -1.1396971093935322 0.3481744757828225 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A'] 26458 18096 FINNPKPKKPL True NCI_RA007_Epitope_Rep2 1294.7761420217798 1294.7750499358601 75.142 2 -1.13975494512999 0.3481744757828225 1.0 ['ENST00000473604.2_1_9:132580793-132585603:-|nuORF', 'ENSG00000136827|ENST00000351698|TOR1A', 'nc|ENSG00000136827|O14656-2|TOR1A', 'ENST00000473084.1_1_9:132584712-132586364:-|nuORF'] 4998 6798 ALLAQSVNQ True H1975_Epitope_Rep3 942.51344497634 942.51234993586 31.101 2 -1.1398041608413236 0.34819551841424734 1.0 ['nc|ENSG00000175387|Q15796-2|SMAD2', 'ENSG00000175387|ENST00000262160|SMAD2', 'nc|ENSG00000166949|P84022-4|SMAD3', 'nc|ENSG00000166949|P84022-3|SMAD3', 'nc|ENSG00000166949|P84022-2|SMAD3', 'ENSG00000166949|ENST00000327367|SMAD3'] 66871 10535 LSWFNWCLP True PC9_epitope_Rep2 1164.54263692964 1164.5415299358601 45.844 2 -1.139814797022404 0.34820382165605096 1.0 ['PDIA5-DIRC2|1|fusion', 'ENST00000477647.1_1_3:122514002-122598222:+|nuORF', 'ENSG00000138463|ENST00000261038|SLC49A4'] 74450 13434 NIYYYLEDDSM True PC9_epitope_Rep5 1424.58059812964 1424.5795099358602 56.691 2 -1.139883041740046 0.34825034075999034 1.0 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-2|EFHC1'] 81094 11469 PPGGGGAGG True NCI_RA007_Epitope_Rep3 625.28198848953 625.2814349679301 52.232 1 -1.1399182316756364 0.34825363666471354 1.0 ['ENST00000478597.5_1_9:140007734-140009165:-|nuORF'] 63555 20919 LPLDDGAAHV True PC9_epitope_Rep2 1006.5083595958998 1006.50726993586 85.911 2 -1.1399379613292957 0.34825363666471354 1.0 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121878388-121880774:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 54012 10753 KYLHEKNQRQ True PC9_epitope_Rep5 1342.7105816430999 1342.7089349037901 46.354 3 -1.1400069103229657 0.34825363666471354 1.0 ['nc|ENSG00000284701|A6NEH6|TMEM247'] 99838 10029 SLGYGHTVPL True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 49.145 2 -1.1400296801120073 0.34825363666471354 1.0 ['ENST00000472190.5_1_1:233765551-233807273:+|nuORF'] 115443 22453 TVFKVRMMAGF True PC9_epitope_Rep5 1285.6675201729297 1285.6664299358602 91.366 2 -1.1400600486238186 0.34825363666471354 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3'] 66474 14244 LSRRYLRDRK True NCI_RA007_Epitope_Rep1 1361.8003997070098 1361.79930993586 59.442 2 -1.1401041226947557 0.3482569321496351 1.0 ['ENST00000475229.2_1_1:1663720-1663897:-|nuORF'] 115950 17721 TVPSEAIRGL True PC9_epitope_Rep5 1041.5818588893299 1041.5807699358602 73.18 2 -1.1401189384362436 0.3482569321496351 1.0 ['nc|ENSG00000205213|Q9BXB1-2|LGR4', 'ENSG00000205213|ENST00000379214|LGR4'] 122465 13219 VGSNVPFL True H1975_Epitope_Rep2 831.4490538146299 831.44850496793 55.976 1 -1.1401408605940089 0.3482569321496351 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B'] 100386 12906 SLNNHKRIHTG True H1975_Epitope_Rep1 1275.67961586799 1275.6785099358601 54.717 2 -1.1401509952884243 0.3482569321496351 1.0 ['ENST00000600766.1_3_19:23032061-23041232:+|nuORF', 'ENSG00000268696|ENST00000600766|ZNF723'] 104392 5271 SSGTSYLNRTE True NCI_RA007_Epitope_Rep4 1213.55749461629 1213.5563899358601 26.824 2 -1.1401606773575843 0.3482569321496351 1.0 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 33321 5865 GLDNQIREIK True NCI_RA007_Epitope_Rep5 1184.65133543148 1184.6502299358601 29.245 2 -1.1401772611691994 0.3482652333401263 1.0 ['ENST00000396338.3_1_12:18845807-18846413:+|nuORF'] 3350 3407 AGHQAMHYSRP True NCI_RA007_Epitope_Rep2 1253.57237391813 1253.57126993586 17.909 2 -1.1401940900250422 0.3482818350867361 1.0 ['nc|ENSG00000112425|O95278-5|EPM2A'] 49242 12155 KGRWNTKIRTA True PC9_epitope_Rep5 1329.7629515691299 1329.76184993586 51.743 2 -1.1402324446221928 0.3482818350867361 1.0 ['ENST00000589718.5_1_12:12232564-12240182:+|nuORF'] 101429 817 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 4.4584 2 -1.1402482722411726 0.3482901356428708 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 65838 15160 LSKMKYDEI True NCI_RA007_Epitope_Rep5 1125.57399662757 1125.57235490379 64.996 3 -1.1403577035897399 0.34832390850272554 1.0 ['nc|ENSG00000075413|P27448-8|MARK3', 'nc|ENSG00000075413|P27448-6|MARK3', 'nc|ENSG00000075413|P27448-3|MARK3', 'nc|ENSG00000075413|P27448-4|MARK3', 'nc|ENSG00000075413|P27448-2|MARK3', 'ENSG00000075413|ENST00000429436|MARK3', 'nc|ENSG00000075413|P27448-7|MARK3', 'MARK3-TDRD9|3|fusion', 'MARK3-TDRD9|2|fusion', 'MARK3-TDRD9|1|fusion', 'ENST00000558953.1_1_14:103932392-103935580:+|nuORF'] 129680 6308 VTIKVTIIIY True NCI_RA007_Epitope_Rep4 1161.7372969015698 1161.73564490379 30.868 3 -1.1404038495936848 0.3483615430660095 1.0 ['ENSG00000175348|ENST00000534025|TMEM9B', 'nc|ENSG00000175348|Q9NQ34-2|TMEM9B', 'ST5-TMEM9B|1|fusion'] 93996 22050 RVPRRGSRS True PC9_epitope_Rep4 1069.62170706905 1069.62060993586 93.036 2 -1.1404062610776682 0.3483615430660095 1.0 ['ENST00000533683.6_2_19:14199897-14200170:-|nuORF'] 69435 13061 LVRNKKVGV True PC9_epitope_Rep1 1011.6552986131098 1011.65420993586 55.107 2 -1.140407771649306 0.3483615430660095 1.0 ['ENSG00000108405|ENST00000225538|P2RX1', 'ENST00000572418.1_1_17:3807220-3819678:-|nuORF'] 102551 11273 SQALLFIKRMY True NCI_RA007_Epitope_Rep2 1368.75877770548 1368.75768993586 48.436 2 -1.140618333892378 0.34847558645984567 1.0 ['ENSG00000125755|ENST00000245934|SYMPK'] 138115 5154 YQHLFWWRWQG True PC9_epitope_Rep2 1605.7629515691297 1605.7612949037898 25.202 3 -1.1406327566443517 0.34847558645984567 1.0 ['chrX:97120275-97141665|243|53.54|0.12|8.77|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|9'] 13038 6813 DLQTWFFPPP True H1975_Epitope_Rep3 1246.60225998074 1246.60116993586 31.16 2 -1.140632983647476 0.34847558645984567 1.0 ['ENSG00000177673|ENST00000313965|TEX44'] 112097 16865 TLTQKSSL True H1975_Epitope_Rep2 876.4916469026 876.49054993586 70.116 2 -1.1407163958855073 0.34850935394725113 1.0 ['CDK13|p.L445Q|1|0.47|ENSG00000065883|chr7:39987721-39987721|T/A|missense_variant'] 22634 5518 ETRAAPLPGL True H1975_Epitope_Rep3 1023.5712942056298 1023.57018993586 26.272 2 -1.140854538593644 0.3485431205746014 1.0 ['ENST00000606557.1_1_20:17948856-17948946:-|nuORF', 'ENST00000481323.1_1_20:17948856-17949358:-|nuORF', 'ENST00000486039.1_1_20:17948856-17949322:-|nuORF'] 44767 9936 IPSSSIPLG True NCI_RA007_Epitope_Rep5 869.4858332461699 869.48528496793 44.861 1 -1.140886036626004 0.34855141674625917 1.0 ['MED15|p.V609Cfs*38|1|0.2|ENSG00000099917|chr22:20584875-20584875|G/-|frameshift_variant', 'MED15|p.Q615Afs*53|1|0.11|ENSG00000099917|chr22:20584891-20584892|-/A|frameshift_variant', 'MED15|p.A683Gfs*30|1|0.14|ENSG00000099917|chr22:20585181-20585182|-/G|frameshift_variant', 'ENSG00000099917|ENST00000263205|MED15', 'ENST00000489651.5_1_22:20929276-20940988:+|nuORF'] 139147 21504 YSRILNYLF True PC9_epitope_Rep5 1187.63389446219 1187.63278993586 87.75 2 -1.1409265688247483 0.34855971270661945 1.0 ['ENST00000482131.1_1_1:35827333-35836274:+|nuORF'] 122066 5279 VGRAPKQA True PC9_epitope_Rep1 825.48208527841 825.48098993586 25.149 2 -1.1409471302602823 0.3485635696821516 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 136261 22983 YGSHGRRG True NCI_RA007_Epitope_Rep4 888.43144668788 888.43034993586 99.811 2 -1.1409532410181724 0.3485635696821516 1.0 ['ENSG00000106006|ENST00000222728|HOXA6'] 123040 4071 VGYPDCWT True PC9_epitope_Rep5 939.3796539254699 939.37854993586 20.732 2 -1.1409617556276512 0.3485845993199964 1.0 ['ENST00000553851.2_1_X:48928954-48929044:-|nuORF'] 131279 4165 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 21.138 2 -1.141004853153115 0.34859289443524766 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 118531 18757 VDTRLRAL True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 78.978 2 -1.1410163190643126 0.34860118933924183 1.0 ['ENSG00000251692|ENST00000447419|PTX4', 'nc|ENSG00000251692|Q96A99-2|PTX4'] 28612 17412 FSRCHFKSR True PC9_epitope_Rep1 1166.57673102258 1166.5750949037902 71.774 3 -1.1410608596803324 0.3486559790151911 1.0 ['nc|ENSG00000117400|P40238-2|MPL', 'ENSG00000117400|ENST00000372470|MPL'] 58260 10350 LETALSYMTK True H1975_Epitope_Rep3 1155.5845613112701 1155.5834699358602 44.865 2 -1.141062190669804 0.3486559790151911 1.0 ['ENSG00000119636|ENST00000394009|BBOF1', 'ENST00000492026.4_1_14:74507337-74544940:+|nuORF'] 46927 11394 IVLGITHEAL True PC9_epitope_Rep6 1064.62299542532 1064.62188993586 54.881 2 -1.1411104126526748 0.34868973947589577 1.0 ['ENST00000397354.7_1_X:39933702-39933888:-|nuORF'] 61423 8345 LLERMRKDWFM True NCI_RA007_Epitope_Rep2 1523.7741104997897 1523.77300993586 37.1 2 -1.1411966570977894 0.3487107659005539 1.0 ['nc|ENSG00000120519|Q0GE19-3|SLC10A7', 'nc|ENSG00000120519|Q0GE19-6|SLC10A7', 'nc|ENSG00000120519|Q0GE19-7|SLC10A7', 'nc|ENSG00000120519|Q0GE19-5|SLC10A7', 'nc|ENSG00000120519|Q0GE19-4|SLC10A7', 'ENSG00000120519|ENST00000335472|SLC10A7', 'nc|ENSG00000120519|Q0GE19-1|SLC10A7'] 111098 7615 TLEERIEFSEL True H1975_Epitope_Rep1 1364.6823607762396 1364.6812699358602 34.28 2 -1.1413041833331 0.3487267634326458 1.0 ['ENSG00000100417|ENST00000216259|PMM1', 'ENST00000482178.5_1_22:41973324-41980100:-|nuORF'] 124872 5023 VLLLLVRKK True PC9_epitope_Rep1 1080.7746854698 1080.7735899358602 24.179 2 -1.141316193763935 0.3487267634326458 1.0 ['nc|ENSG00000062038|P22223-2|CDH3', 'chr16:68695923-68698093|483|18.67|0.81|4.53|+|ENST00000429102|CDH3,CDH3', 'ENST00000542274.5_1_16:68679206-68732300:+|nuORF', 'ENSG00000062038|ENST00000264012|CDH3', 'ENST00000567674.1_1_16:68721613-68732300:+|nuORF'] 107934 8497 TAWDRKPL True PC9_epitope_Rep4 985.5345147740899 985.53340993586 40.157 2 -1.1413480464824601 0.3487267634326458 1.0 ['ENST00000264560.11_1_19:747626-748151:+|nuORF'] 86434 26988 QQQQRRQQEP True H1975_Epitope_Rep2 1324.6596086994 1324.6585099358601 111.35 2 -1.1413561199550468 0.3487267634326458 1.0 ['ENSG00000204442|ENST00000375915|NALF1'] 36748 8241 GVPADQLRVIF True PC9_epitope_Rep6 1213.68190728377 1213.68025490379 41.283 3 -1.1414545241721217 0.3487267634326458 1.0 ['nc|ENSG00000185345|O60260-6|PRKN', 'nc|ENSG00000185345|O60260-7|PRKN', 'nc|ENSG00000185345|O60260-5|PRKN', 'nc|ENSG00000185345|O60260-8|PRKN', 'nc|ENSG00000185345|O60260-2|PRKN', 'ENSG00000185345|ENST00000366898|PRKN'] 31623 9262 GEGPRERREGP True H1975_Epitope_Rep3 1238.6115958778198 1238.6104899358602 40.618 2 -1.1415046397786728 0.348768222038322 1.0 ['ENST00000333602.10_1_3:195635568-195635940:-|nuORF'] 29759 22855 FVRRYRQHSEE True NCI_RA007_Epitope_Rep1 1505.7487580569702 1505.7476699358601 93.789 2 -1.141515555220425 0.348768222038322 1.0 ['ENST00000578082.5_1_17:80416679-80436800:+|nuORF', 'ENST00000577812.5_1_17:80416679-80441656:+|nuORF', 'nc|ENSG00000141562|Q9UHQ1-4|NARF', 'nc|ENSG00000141562|Q9UHQ1-3|NARF', 'ENSG00000141562|ENST00000309794|NARF', 'nc|ENSG00000141562|Q9UHQ1-2|NARF'] 121583 13993 VGKYFWPRI True NCI_RA007_Epitope_Rep3 1164.6443995762397 1164.64330993586 62.35 2 -1.141524098543812 0.348768222038322 1.0 ['ENST00000511405.1_1_5:111575355-111600594:-|nuORF', 'ENSG00000129595|ENST00000261486|EPB41L4A'] 66765 14094 LSTYSCCI True PC9_epitope_Rep6 888.37212601688 888.37102993586 66.084 2 -1.141550347119434 0.348768222038322 1.0 ['ENST00000376436.5_1_20:25655347-25655485:-|nuORF'] 98737 19512 SIRRWAYQMFR True PC9_epitope_Rep1 1512.7772217342797 1512.7755749037901 79.872 3 -1.1416022953919847 0.348768222038322 1.0 ['ACACB|p.E285Q|1|0.24|ENSG00000076555|chr12:109167962-109167962|G/C|missense_variant'] 71094 5403 METDLEVRLR True H1975_Epitope_Rep2 1260.6496211793199 1260.64798490379 25.815 3 -1.1416668561947663 0.3487765131260663 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 33751 15300 GLSGRQVHRT True PC9_epitope_Rep5 1109.6053882985698 1109.6042899358602 63.861 2 -1.1416887282141055 0.348784804002699 1.0 ['ENSG00000101138|ENST00000217109|CSTF1'] 1310 7740 AEDYFNVSL True PC9_epitope_Rep4 1056.47639076128 1056.47528993586 37.162 2 -1.141728177806227 0.3488185568060294 1.0 ['nc|ENSG00000254221|Q9Y5G3-2|PCDHGB1', 'ENSG00000254221|ENST00000523390|PCDHGB1'] 4397 11476 AISGKIPSP True H1975_Epitope_Rep3 868.50181766348 868.5012649679301 49.264 1 -1.1417339522139272 0.3488224061107575 1.0 ['ENSG00000135912|ENST00000392102|TTLL4'] 72595 20371 MVRSRHLRKL True NCI_RA007_Epitope_Rep5 1294.7768278114597 1294.7751749037902 85.293 3 -1.1417359546378525 0.3488224061107575 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 101447 1261 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 7.0637 2 -1.1417814451171784 0.3488232973131213 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 122993 12081 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 51.512 2 -1.1417848149684173 0.3488232973131213 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 84505 8718 QGSGASRDP True PC9_epitope_Rep2 873.39405811965 873.39296993586 38.895 2 -1.1417871058770397 0.3488232973131213 1.0 ['ENST00000349155.6_3_12:115121317-115121416:-|nuORF'] 115947 11253 TVPRVVAVSP True H1975_Epitope_Rep1 1023.6076797143498 1023.6065899358599 48.26 2 -1.1418122272329594 0.3488232973131213 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 62462 14572 LLSLIHLV True PC9_epitope_Rep6 906.59023874506 906.58914993586 67.948 2 -1.141856469086756 0.3488232973131213 1.0 ['ENSG00000243896|ENST00000641841|OR2A7', 'ENSG00000180658|ENST00000315453|OR2A4'] 68603 19878 LTYRDLYYF True PC9_epitope_Rep2 1252.61282466444 1252.61172993586 81.854 2 -1.1418631549407112 0.3488232973131213 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 18856 10029 ELEHSDSVK True PC9_epitope_Rep6 1042.49310345458 1042.49200993586 49.145 2 -1.1418741367321679 0.3488232973131213 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1'] 136727 5239 YILRHMPTLHR True H1975_Epitope_Rep1 1435.7870581419902 1435.78540490379 25.215 3 -1.1418825159644463 0.3488232973131213 1.0 ['nc|ENSG00000153303|Q8N878-2|FRMD1', 'ENSG00000153303|ENST00000283309|FRMD1'] 24624 13317 FAQSTYQFN True NCI_RA007_Epitope_Rep4 1104.48762415132 1104.4870749679299 58.371 1 -1.1419175165814015 0.3488232973131213 1.0 ['CDH9|p.P269A|1|0.57|ENSG00000113100|chr5:26905965-26905965|G/C|missense_variant'] 93072 20749 RRRKRLQELE True H1975_Epitope_Rep2 1382.8218634275797 1382.82022490379 85.92 3 -1.1419302442785388 0.3488232973131213 1.0 ['ENSG00000090889|ENST00000374403|KIF4A', 'nc|ENSG00000090889|O95239-2|KIF4A'] 5513 17406 ANARERARMSV True NCI_RA007_Epitope_Rep3 1259.65168686799 1259.6505899358601 76.37 2 -1.1419437343592753 0.3488232973131213 1.0 ['MSC|p.R121S|1|0.26|ENSG00000178860|chr8:71843818-71843818|G/T|missense_variant'] 67671 11353 LTFPMWNP True PC9_epitope_Rep2 1004.47897404392 1004.47786993586 48.992 2 -1.141950785560181 0.3488232973131213 1.0 ['ENST00000403290.5_1_11:13331558-13347974:+|nuORF'] 84986 7476 QIEAVLLNS True PC9_epitope_Rep1 985.54441075145 985.54330993586 33.575 2 -1.1419515592785168 0.3488232973131213 1.0 ['GCN1L1-CCND2|1|fusion', 'ENSG00000118971|ENST00000261254|CCND2'] 109463 5427 TGVFLQYTH True H1975_Epitope_Rep2 1064.52909504048 1064.5279899358602 25.901 2 -1.1420127974104137 0.3488232973131213 1.0 ['ENSG00000146282|ENST00000369536|RARS2', 'ENST00000497828.1_1_6:88228346-88228628:-|nuORF'] 55828 7441 LDEQQKNSFN True H1975_Epitope_Rep1 1221.56257999673 1221.5614899358602 33.625 2 -1.1420149606698666 0.3488232973131213 1.0 ['ENSG00000135966|ENST00000393359|TGFBRAP1'] 138673 26803 YRSVLIRH True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 109.02 2 -1.1420230831001768 0.3488232973131213 1.0 ['ENST00000487909.5_1_21:37729009-37732296:+|nuORF'] 85185 9170 QKEEYIHLERK True NCI_RA007_Epitope_Rep2 1471.7783268497499 1471.77722993586 40.277 2 -1.142035075550105 0.3488232973131213 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant', 'ZDBF2|p.I1094Nfs*14|1|0.39|ENSG00000204186|chr2:206307801-206307802|-/A|frameshift_variant'] 116286 25579 TVVLRVRPQ True NCI_RA007_Epitope_Rep5 1066.66111226954 1066.6600099358602 105.93 2 -1.1420525657646536 0.348831585378271 1.0 ['nc|ENSG00000139626|P26010-2|ITGB7', 'ENSG00000139626|ENST00000267082|ITGB7'] 15224 7830 EAGAAAGG True H1975_Epitope_Rep1 602.26600407222 602.26545496793 35.068 1 -1.1420930630762682 0.3488392811688642 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2', 'nc|ENSG00000020181|Q96PE1-2|ADGRA2'] 69160 11723 LVLTHGADP True PC9_epitope_Rep6 921.4919812557699 921.49088993586 56.239 2 -1.1420997434202178 0.3488392811688642 1.0 ['ENSG00000154237|ENST00000388948|LRRK1', 'LRRK1|p.D828Afs*9|1|0.45|ENSG00000154237|chr15:101027336-101027354|GGACGTGGGCAGCACCATC/-|frameshift_variant', 'LRRK1|p.R1305Pfs*82|1|0.11|ENSG00000154237|chr15:101053277-101053278|-/C|frameshift_variant', 'nc|ENSG00000154237|Q38SD2-2|LRRK1'] 59125 16859 LGELLSKLT True PC9_epitope_Rep5 972.58554728744 972.58444993586 69.858 2 -1.1421015780519035 0.3488392811688642 1.0 ['ENST00000460601.5_1_20:57569750-57570100:+|nuORF'] 25173 10030 FDTSDDEE True NCI_RA007_Epitope_Rep2 956.3247007168 956.32360993586 43.618 2 -1.1421181702151848 0.3488392811688642 1.0 ['ENSG00000171055|ENST00000405912|FEZ2', 'nc|ENSG00000171055|Q9UHY8-2|FEZ2'] 82386 24254 PTWDLPRRL True PC9_epitope_Rep3 1152.64037682496 1152.63874490379 98.596 3 -1.1421617476825394 0.3488475685031754 1.0 ['ENST00000290079.8_1_9:139687350-139687656:+|nuORF'] 31136 9393 GCSHGPRG True NCI_RA007_Epitope_Rep2 769.32895576529 769.32840496793 41.145 1 -1.1422460376646202 0.3488813093389671 1.0 ['ENST00000564946.5_1_16:30663032-30664184:+|nuORF', 'ENST00000565410.5_1_16:30662428-30664184:+|nuORF', 'ENST00000563399.5_1_16:30662065-30664184:+|nuORF', 'ENST00000300835.8_2_16:30662428-30664408:+|nuORF', 'ENST00000568754.5_2_16:30662065-30664408:+|nuORF'] 83575 12397 QDSLAGLVLY True PC9_epitope_Rep3 1077.57062549929 1077.5695299358601 52.714 2 -1.1422515805323528 0.34888959592745783 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 15517 7718 EARIYAEDP True H1975_Epitope_Rep2 1062.4981888350198 1062.49708993586 34.639 2 -1.1423120671787874 0.348910608837304 1.0 ['ENST00000495767.5_1_3:182740340-182790239:-|nuORF', 'FXR1-MCCC1|1|fusion', 'ENSG00000078070|ENST00000265594|MCCC1'] 131531 24017 VVVGVGLIVG True NCI_RA007_Epitope_Rep3 910.5851533646199 910.5846049679301 104.03 1 -1.1423590160862453 0.3489188948420021 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 74692 9067 NLINKMWLGVP True NCI_RA007_Epitope_Rep2 1283.70601385663 1283.70490993586 39.872 2 -1.1423855388154136 0.3489265853068808 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6', 'ENST00000557256.2_1_14:21191020-21191104:-|nuORF'] 86879 20807 QRRKYFVDV True H1975_Epitope_Rep2 1209.66184054553 1209.66019490379 86.156 3 -1.1424434827586682 0.3489265853068808 1.0 ['TPH2|p.P258Lfs*10|1|0.26|ENSG00000139287|chr12:71972682-71972682|C/-|frameshift_variant', 'ENSG00000139287|ENST00000333850|TPH2', 'nc|ENSG00000139287|Q8IWU9-2|TPH2'] 62567 10472 LLTSEARVA True PC9_epitope_Rep5 958.5447451046199 958.54364993586 45.266 2 -1.1424678883852288 0.3489265853068808 1.0 ['ENST00000372797.7_2_1:40537598-40537793:+|nuORF'] 61541 14636 LLGFLVMP True PC9_epitope_Rep4 888.51429692348 888.5131899358599 64.228 2 -1.1425377706495963 0.3489265853068808 1.0 ['ENSG00000102468|ENST00000542664|HTR2A'] 18682 10466 ELDAVLEVPVP True H1975_Epitope_Rep1 1179.63870505911 1179.6376099358602 45.212 2 -1.142550466672487 0.3489348705810491 1.0 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 18422 10580 EKETIKAAL True NCI_RA007_Epitope_Rep5 1001.5757108797297 1001.5746099358599 47.33 2 -1.1425574806434644 0.3489514404967932 1.0 ['INPP1|p.D316Efs*2|1|0.28|ENSG00000151689|chr2:190371146-190371188|GGGACTCTTGTGCTGCTCATGCCATACTGAGGGCCATGGGTGG/-|frameshift_variant', 'ENSG00000151689|ENST00000392329|INPP1'] 28542 9067 FSKESVRAP True PC9_epitope_Rep6 1019.5399940773498 1019.53888993586 44.939 2 -1.1425729555853992 0.3489514404967932 1.0 ['ENSG00000101639|ENST00000506447|CEP192', 'nc|ENSG00000101639|Q8TEP8-1|CEP192', 'nc|ENSG00000101639|Q8TEP8-2|CEP192', 'ENST00000513432.5_1_18:13059017-13124766:+|nuORF'] 79459 8437 PGPLSKQGS True PC9_epitope_Rep5 869.46068112749 869.46013496793 37.396 1 -1.1426500233816759 0.3489851752879048 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 22715 4736 ETWMLHNS True H1975_Epitope_Rep3 1016.4385657839199 1016.43746993586 23.342 2 -1.1427326288678352 0.34902719279270106 1.0 ['PDZRN3|p.S718T|1|0.3|ENSG00000121440|chr3:73384414-73384414|A/T|missense_variant'] 19624 10604 ELRQPFFP True PC9_epitope_Rep3 1032.5392658013598 1032.5381699358602 45.734 2 -1.1427758839188573 0.34902719279270106 1.0 ['nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 46328 6922 ITFLMIAKP True H1975_Epitope_Rep1 1032.6041745570399 1032.60306993586 31.669 2 -1.1428451987792791 0.349048200743116 1.0 ['nc|ENSG00000196277|Q14831-5|GRM7', 'nc|ENSG00000196277|Q14831-3|GRM7', 'nc|ENSG00000196277|Q14831-4|GRM7', 'ENSG00000196277|ENST00000357716|GRM7', 'nc|ENSG00000196277|Q14831-2|GRM7'] 19600 10565 ELRKKSRRE True NCI_RA007_Epitope_Rep1 1200.70510233984 1200.70400993586 45.079 2 -1.142853643230409 0.3490520422445604 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 110849 28093 TKVLVLCL True PC9_epitope_Rep2 887.5514107081899 887.55030993586 117.54 2 -1.1428585342767323 0.3490520422445604 1.0 ['ENSG00000180104|ENST00000512944|EXOC3'] 137929 8461 YPSDFLDALH True NCI_RA007_Epitope_Rep5 1176.54513902744 1176.5440499358601 39.226 2 -1.1429295679825082 0.3490603249735975 1.0 ['nc|ENSG00000113073|Q96Q91|SLC4A9', 'nc|ENSG00000113073|Q96Q91-4|SLC4A9', 'nc|ENSG00000113073|Q96Q91-2|SLC4A9', 'ENSG00000113073|ENST00000506757|SLC4A9'] 92586 9368 RRCRDCRRCLV True PC9_epitope_Rep4 1434.72309506978 1434.7214549037901 43.643 3 -1.1429774067290717 0.3490680068706661 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|36|3|sense', 'chr5:76812310-76832690|245|10.41|0.13|6.32|+|1|TE_info:SVA_D,SVA_D_dup452,SVA,Retroposon,donor,+,76811569,76812310|None,F2RL1|4'] 120117 11350 VFIGHLCL True NCI_RA007_Epitope_Rep4 900.4891448047999 900.48804993586 50.564 2 -1.1430094742700896 0.3490680068706661 1.0 ['ENSG00000126895|ENST00000646375|AVPR2', 'nc|ENSG00000126895|P30518-2|AVPR2'] 59674 16786 LGTAGHHHPF True PC9_epitope_Rep5 1072.52026169228 1072.5191699358602 69.573 2 -1.1430378457302974 0.3490680068706661 1.0 ['ENST00000526600.1_1_11:12962072-12962216:+|nuORF'] 55423 7788 LATKMEYFYWR True H1975_Epitope_Rep3 1506.7329568804598 1506.73184993586 34.939 2 -1.143043779635555 0.3490680068706661 1.0 ['ENST00000496711.5_1_9:130118742-130126953:+|nuORF'] 36110 19525 GVELFGKLV True PC9_epitope_Rep3 960.5644179200399 960.56332993586 80.334 2 -1.1431096871208004 0.3490972937898393 1.0 ['nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 12061 10329 DIEDYMREWRT True NCI_RA007_Epitope_Rep1 1512.6667277954398 1512.6656299358601 44.173 2 -1.1431385058902415 0.3490972937898393 1.0 ['ENSG00000010017|ENST00000011619|RANBP9', 'nc|ENSG00000010017|Q96S59-3|RANBP9'] 123510 7489 VIHEIQRLVD True NCI_RA007_Epitope_Rep2 1220.6877209402 1220.68662993586 33.757 2 -1.1432853599894013 0.34913930202674337 1.0 ['nc|ENSG00000290611|Q6ZSU1|CYP2G1P'] 131276 4512 VVQLLLKPVL True PC9_epitope_Rep2 1120.7583666993198 1120.7572699358602 22.716 2 -1.1433029327554862 0.34913930202674337 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 122028 5367 VGQLWYFWR True PC9_epitope_Rep5 1253.6345631685297 1253.6329049037902 25.658 3 -1.143358875163023 0.34916030534351145 1.0 ['ENSG00000187688|ENST00000338560|TRPV2', 'ENST00000441875.1_1_17:16330801-16331912:+|nuORF'] 79498 8595 PGPVPREP True PC9_epitope_Rep2 847.4552018242299 847.45410993586 38.422 2 -1.143391459888611 0.34921503269636905 1.0 ['ENST00000272233.5_1_2:20647813-20648077:+|nuORF'] 65774 13797 LSILQMHRENK True H1975_Epitope_Rep1 1367.73435386279 1367.7332499358602 58.213 2 -1.1434197134140813 0.34921503269636905 1.0 ['ENST00000524914.5_1_14:67667213-67667267:+|nuORF'] 135974 8213 YFEAKWQFYLE True PC9_epitope_Rep1 1522.7132669817 1522.7121699358602 36.424 2 -1.1434429743570014 0.3492360342480567 1.0 ['nc|ENSG00000153531|Q8NDY3-2|ADPRHL1', 'nc|ENSG00000153531|Q8NDY3|ADPRHL1', 'ENSG00000153531|ENST00000612156|ADPRHL1'] 66370 9193 LSQYPMMRGP True PC9_epitope_Rep5 1178.55763537078 1178.55652993586 40.305 2 -1.1434934382062492 0.3492443132665004 1.0 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2'] 23432 6964 EVVTPDFQEP True NCI_RA007_Epitope_Rep1 1159.5397192938299 1159.5386299358602 31.091 2 -1.143713589273542 0.34934992239778134 1.0 ['ENSG00000130287|ENST00000252575|NCAN', 'NCAN|p.G1078Afs*46|1|0.26|ENSG00000130287|chr19:19235075-19235075|G/-|frameshift_variant'] 69521 5361 LVSRPIRWYPN True PC9_epitope_Rep5 1399.7724536236697 1399.7707949037901 25.636 3 -1.1437801893541897 0.34934992239778134 1.0 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2'] 135156 9015 YARAFLDDT True H1975_Epitope_Rep2 1070.50327421546 1070.5021699358601 39.627 2 -1.1437982038278636 0.34935819965143056 1.0 ['ENSG00000088387|ENST00000682017|DOCK9', 'nc|ENSG00000088387|Q9BZ29-3|DOCK9', 'nc|ENSG00000088387|Q9BZ29-5|DOCK9', 'nc|ENSG00000088387|Q9BZ29|DOCK9', 'nc|ENSG00000088387|Q9BZ29-4|DOCK9'] 53717 17690 KYEDLYAFSYN True H1975_Epitope_Rep2 1411.6295969273897 1411.6284899358602 73.365 2 -1.143805140693969 0.349366476694484 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 122885 21389 VGVPTRAR True PC9_epitope_Rep6 854.5086343794198 854.50808496793 95.147 1 -1.143866296375756 0.3493696971238854 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 121713 15534 VGLQTLRSL True PC9_epitope_Rep5 985.59202965021 985.59092993586 64.762 2 -1.1438925657888828 0.3493696971238854 1.0 ['NRIP3|p.L196V|1|0.57|ENSG00000175352|chr11:8984101-8984101|G/C|missense_variant'] 101428 631 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 3.4453 2 -1.1439190082844843 0.3493696971238854 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 27615 19328 FPTVEMVI True PC9_epitope_Rep6 934.4833907180199 934.48228993586 86.994 2 -1.1439461123684305 0.3493696971238854 1.0 ['nc|ENSG00000185437|P55822|SH3BGR'] 92978 6488 RRQMELLHLVE True NCI_RA007_Epitope_Rep2 1422.77655302794 1422.77491490379 29.846 3 -1.1439931855193008 0.3493696971238854 1.0 ['nc|ENSG00000180376|A2RUB6-3|CCDC66', 'ENSG00000180376|ENST00000394672|CCDC66', 'ENST00000476142.1_1_3:56651192-56651654:+|nuORF'] 28257 4122 FRTHFGGG True PC9_epitope_Rep3 877.4194850218497 877.41838993586 20.976 2 -1.144010041198184 0.34939069376955756 1.0 ['ENST00000466129.5_1_10:79793659-79795541:+|nuORF', 'ENSG00000138326|ENST00000372360|RPS24', 'ENST00000485708.6_1_10:79793659-79797725:+|nuORF', 'ENST00000478655.5_1_10:79793659-79797065:+|nuORF', 'nc|ENSG00000138326|P62847-3|RPS24', 'nc|ENSG00000138326|P62847|RPS24', 'ENST00000465692.1_1_10:79795142-79808843:+|nuORF', 'nc|ENSG00000138326|P62847-4|RPS24', 'ENST00000605314.1_1_17:8199948-8200373:-|nuORF', 'ENST00000469473.1_1_14:81799307-81799562:-|nuORF'] 131277 3883 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 20.033 2 -1.1440948214010827 0.3494371303186415 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 79172 9486 PGEAVEGG True NCI_RA007_Epitope_Rep5 714.3184335678999 714.31788496793 43.121 1 -1.1441398327660706 0.3494454055154167 1.0 ['nc|ENSG00000101204|P43681-2|CHRNA4', 'ENSG00000101204|ENST00000370263|CHRNA4'] 68041 11199 LTNGLYCF True H1975_Epitope_Rep3 929.43168949833 929.43058993586 48.174 2 -1.1441682720490183 0.3494791202920488 1.0 ['ENSG00000175202|ENST00000311755|HIGD2B'] 19543 6725 ELQSEIRIQVD True H1975_Epitope_Rep1 1328.69359416628 1328.69194490379 30.911 3 -1.144189058526609 0.3494829494142637 1.0 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 69147 15999 LVLPVHRLLAA True PC9_epitope_Rep4 1200.77066271852 1200.76956993586 69.472 2 -1.1441900031446823 0.3494829494142637 1.0 ['ENST00000381095.7_2_X:6146731-6146848:-|nuORF'] 73499 9954 NFDVGKVQ True H1975_Epitope_Rep1 905.4606811274898 905.45958993586 43.225 2 -1.1442943722839163 0.34952814590593445 1.0 ['ENSG00000016602|ENST00000370563|CLCA4'] 67151 12766 LTDEKFYRNLI True H1975_Epitope_Rep3 1410.7507151195798 1410.74960993586 54.318 2 -1.1443835360259818 0.34952814590593445 1.0 ['ENST00000228741.7_1_12:96662085-96662190:+|nuORF'] 119227 7546 VEKRLNFTLRH True H1975_Epitope_Rep3 1411.80481638111 1411.80316490379 34.007 3 -1.1443886957446556 0.34952814590593445 1.0 ['ENSG00000067365|ENST00000381920|METTL22', 'nc|ENSG00000067365|Q9BUU2-3|METTL22', 'ENST00000565866.5_1_16:8735295-8739997:+|nuORF'] 14180 4283 DSQPNSTR True PC9_epitope_Rep1 903.40462280335 903.40352993586 21.366 2 -1.1443903762770744 0.34952814590593445 1.0 ['L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|21|1|sense', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|61|2|sense', 'L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|61|2|sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|78|2|sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|115|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|103|2|sense', 'L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|70|2|sense'] 112106 10547 TLTQVTQRP True PC9_epitope_Rep4 1042.5771078620598 1042.5760099358602 48.3 2 -1.1443916217048828 0.34952814590593445 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4'] 6190 13367 APQMRSLKV True PC9_epitope_Rep1 1028.5800850675198 1028.5789899358601 56.276 2 -1.1444149606555345 0.34952814590593445 1.0 ['ENST00000375190.8_1_19:3600670-3606611:-|nuORF'] 14490 8382 DTVLVAKPHR True H1975_Epitope_Rep1 1134.65094150866 1134.6498499358602 37.169 2 -1.1444349735051647 0.34952814590593445 1.0 ['ENSG00000100335|ENST00000325301|MIEF1'] 25778 20222 FFTVIFQWLKV True PC9_epitope_Rep2 1426.80129414046 1426.80018993586 83.202 2 -1.1444956640239492 0.34956185534231243 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3'] 9044 9180 AVINQRLQ True PC9_epitope_Rep1 940.5454138109599 940.54430993586 40.161 2 -1.1445360256196757 0.34956320494398596 1.0 ['UBXN2A|p.I244N|1|0.14|ENSG00000173960|chr2:23999818-23999818|T/A|missense_variant'] 64342 10317 LQNRRLFQSLH True NCI_RA007_Epitope_Rep5 1410.7844152896998 1410.7833099358602 46.315 2 -1.1445540243746684 0.34956320494398596 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 46586 13853 ITRWRLTRERR True H1975_Epitope_Rep3 1541.9015107306097 1541.9004099358601 58.594 2 -1.1445805287283017 0.34956320494398596 1.0 ['ADAM9|p.P48R|1|0.16|ENSG00000168615|chr8:39007931-39007931|C/G|missense_variant'] 20815 6469 EQNWRQHREAY True NCI_RA007_Epitope_Rep2 1515.69672248411 1515.69562993586 29.771 2 -1.144604932043286 0.34956320494398596 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 80925 11523 PMLEDKFRSL True NCI_RA007_Epitope_Rep5 1234.63799386646 1234.6368899358602 50.973 2 -1.144627401029705 0.34956320494398596 1.0 ['nc|ENSG00000169758|Q2M3C6-2|TMEM266', 'ENSG00000169758|ENST00000388942|TMEM266'] 122784 15839 VGVIIGKI True PC9_epitope_Rep4 797.5374748962099 797.53636993586 68.847 2 -1.1446337747697783 0.34956320494398596 1.0 ['ENSG00000124164|ENST00000475243|VAPB', 'ENST00000476395.1_1_20:57015848-57019288:+|nuORF', 'ENST00000463370.5_1_20:57007450-57019288:+|nuORF'] 18865 13353 ELEKGTPEP True PC9_epitope_Rep3 998.4920408254198 998.49094993586 56.397 2 -1.1446612512396015 0.34956320494398596 1.0 ['nc|ENSG00000123992|Q9ULA0-2|DNPEP', 'ENSG00000123992|ENST00000273075|DNPEP', 'ENST00000460963.5_1_2:220250088-220252486:-|nuORF', 'ENST00000522421.1_1_2:220250088-220250490:-|nuORF'] 3155 17938 AGEAQDALWL True PC9_epitope_Rep6 1072.5189242795998 1072.5178299358602 81.625 2 -1.144666142425258 0.34956320494398596 1.0 ['ENST00000488748.1_1_20:60777823-60778294:+|nuORF'] 45189 10266 IREQWWRWNRW True H1975_Epitope_Rep1 1714.8593115654596 1714.85820993586 44.432 2 -1.144666375275831 0.34956320494398596 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 22667 10388 ETSPREAVT True PC9_epitope_Rep1 988.48253877088 988.48144993586 44.84 2 -1.1447048302795284 0.34956320494398596 1.0 ['ENST00000588387.1_1_19:14265998-14266202:+|nuORF'] 12245 7574 DIREKHRLWHA True PC9_epitope_Rep6 1459.77966426243 1459.77802490379 38.407 3 -1.1447390565393032 0.34956320494398596 1.0 ['ENSG00000168348|ENST00000307169|INSM2'] 54950 8758 LAHEHHCLRI True NCI_RA007_Epitope_Rep2 1227.62949487143 1227.62838993586 38.712 2 -1.1447693749087555 0.34956320494398596 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.T492Nfs*14|1|0.09|ENSG00000155897|chr8:130937079-130937080|-/T|frameshift_variant'] 118763 7762 VEDSKKESSS True H1975_Epitope_Rep1 1094.5091474415399 1094.50804993586 34.814 2 -1.1447828326078981 0.34956320494398596 1.0 ['ENSG00000005436|ENST00000321027|GCFC2', 'nc|ENSG00000005436|P16383-2|GCFC2'] 32888 20912 GILVLLILILL True PC9_epitope_Rep3 1191.85701811143 1191.85592993586 85.715 2 -1.1447862176259158 0.34956320494398596 1.0 ['CDH1|p.A719V|1|0.26|ENSG00000039068|chr16:68823618-68823618|C/T|missense_variant'] 39636 11902 HPPQHQHHH True PC9_epitope_Rep2 1153.5278066842102 1153.52617490379 51.105 3 -1.1448554618011761 0.3495714758017344 1.0 ['ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion', 'ENST00000307403.6_1_7:155532339-155538302:+|nuORF'] 94172 19640 RWLEKEERFLK True PC9_epitope_Rep5 1532.8463468399198 1532.84470490379 80.6 3 -1.144871654469155 0.3495797464491436 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 103231 20699 SQRWRLQLRRR True NCI_RA007_Epitope_Rep5 1553.9127441206497 1553.9116499358602 86.58 2 -1.1450060145027634 0.3496172723342573 1.0 ['ENST00000359541.6_1_2:27566423-27579033:-|nuORF'] 3833 10939 AGYGAQQP True H1975_Epitope_Rep2 790.36096708622 790.35986993586 47.111 2 -1.1450198446504738 0.3496172723342573 1.0 ['nc|ENSG00000114354|Q92734-2|TFG', 'ENSG00000114354|ENST00000240851|TFG', 'nc|ENSG00000114354|Q92734-4|TFG', 'nc|ENSG00000114354|Q92734-3|TFG', 'ENST00000481203.1_1_3:100463567-100467372:+|nuORF'] 57581 12032 LELFQNIRPL True NCI_RA007_Epitope_Rep1 1241.71320741205 1241.71210993586 50.789 2 -1.145022046622428 0.3496172723342573 1.0 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 95493 5409 SAPAPSPWPWH True H1975_Epitope_Rep2 1231.57744221523 1231.5757949037902 25.839 3 -1.1450607767280405 0.34963576958771403 1.0 ['FOXN1|p.Y617Tfs*59|2|0.28|ENSG00000109101|chr17:28537337-28537337|C/-|frameshift_variant'] 77762 4848 PAASPDTAAW True NCI_RA007_Epitope_Rep4 985.4505103666099 985.44940993586 25.088 2 -1.1450761210972369 0.34963576958771403 1.0 ['ENST00000587411.5_1_19:5925055-5932565:-|nuORF', 'RANBP3|p.L337Ifs*20|1|0.12|ENSG00000031823|chr19:5923906-5923907|-/G|frameshift_variant', 'ENST00000586344.5_1_19:5917623-5933521:-|nuORF', 'nc|ENSG00000031823|Q9H6Z4-3|RANBP3', 'ENST00000592771.5_1_19:5917623-5941693:-|nuORF', 'nc|ENSG00000031823|Q9H6Z4-2|RANBP3', 'ENSG00000031823|ENST00000340578|RANBP3'] 32628 3879 GHFHGPWC True PC9_epitope_Rep5 939.3809913381499 939.37988993586 19.999 2 -1.145077973871915 0.34963576958771403 1.0 ['ENST00000436518.5_1_22:20117014-20127004:+|nuORF', 'ENST00000334554.11_1_22:20119331-20127004:+|nuORF'] 32627 3572 GHFHGPWC True PC9_epitope_Rep3 939.3809913381499 939.37988993586 18.861 2 -1.1451214275204251 0.34963576958771403 1.0 ['ENST00000436518.5_1_22:20117014-20127004:+|nuORF', 'ENST00000334554.11_1_22:20119331-20127004:+|nuORF'] 62651 12328 LLVSSDHL True PC9_epitope_Rep5 882.4810822189002 882.47998993586 52.413 2 -1.1451537386551585 0.34963576958771403 1.0 ['ENST00000546677.1_1_12:72083426-72090218:+|nuORF'] 95676 5521 SAVVLEESKC True H1975_Epitope_Rep2 1063.52196105471 1063.5208699358602 26.246 2 -1.1451784124034114 0.34963576958771403 1.0 ['ENSG00000166446|ENST00000570137|CDYL2'] 16069 22960 EEDADCYDD True PC9_epitope_Rep1 1073.31315005693 1073.3120499358602 93.118 2 -1.145188890761662 0.34963576958771403 1.0 ['ENSG00000107341|ENST00000263228|UBE2R2'] 65729 13169 LSHVLGKDV True PC9_epitope_Rep5 966.5498304850598 966.54872993586 55.659 2 -1.1451896786514468 0.34963576958771403 1.0 ['nc|ENSG00000178104|Q5VU43-13|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-2|PDE4DIP'] 97420 20738 SGGGDRGGG True H1975_Epitope_Rep1 718.2994294588199 718.29888496793 86.189 1 -1.1451980254487775 0.34963576958771403 1.0 ['ENSG00000164690|ENST00000297261|SHH'] 11228 11711 DENLKLCRR True NCI_RA007_Epitope_Rep5 1145.59752603681 1145.5964299358602 51.699 2 -1.1452000296055167 0.34963576958771403 1.0 ['IL1RL2|p.V442L|1|0.15|ENSG00000115598|chr2:102234923-102234923|G/C|missense_variant'] 115511 14468 TVGLRPGKVM True PC9_epitope_Rep4 1056.6113851957998 1056.61028993586 63.562 2 -1.1452111074667715 0.34963576958771403 1.0 ['ENST00000580793.5_1_17:80006031-80006253:-|nuORF'] 115512 14468 TVGLRPGKVM True PC9_epitope_Rep4 1056.6113851957998 1056.61028993586 63.562 2 -1.1452111074667715 0.34963576958771403 1.0 ['ENST00000580793.5_1_17:80006031-80006253:-|nuORF'] 30872 16728 GARKQRRPF True NCI_RA007_Epitope_Rep3 1114.6471935408997 1114.6460899358601 73.635 2 -1.1452311390830052 0.34963576958771403 1.0 ['ENST00000573622.1_1_12:9795539-9795680:+|nuORF'] 48220 23700 KCRNHRLLRR True NCI_RA007_Epitope_Rep3 1350.78912383066 1350.78802993586 102.75 2 -1.1452828304040326 0.3496523054626816 1.0 ['L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|212|2|anti-sense', 'chr15:53523322-53684228|265|18.12|0.04|8.74|-|0|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|117'] 68562 13489 LTWRTWMIPQA True H1975_Epitope_Rep3 1401.72272654993 1401.7216299358602 57.161 2 -1.1453070290640175 0.3496523054626816 1.0 ['ENST00000460547.6_1_6:43483727-43483814:-|nuORF'] 34915 6828 GQVYTTKHIVR True NCI_RA007_Epitope_Rep5 1300.72516907808 1300.7235149037901 32.949 3 -1.1453738862793192 0.3496732857033892 1.0 ['ZSWIM2|p.P319T|1|0.41|ENSG00000163012|chr2:186829867-186829867|G/T|missense_variant'] 7531 8426 ASEVYLTAYK True H1975_Epitope_Rep1 1143.58119018299 1143.58008993586 37.338 2 -1.1454719900638242 0.3497406691752263 1.0 ['ENST00000523153.2_1_8:54885384-54885555:+|nuORF'] 117446 15474 VADTLAKEGP True PC9_epitope_Rep1 999.5236753068699 999.52256993586 64.342 2 -1.145478433023667 0.3497406691752263 1.0 ['CYB5R4|p.T157A|2|0.18|ENSG00000065615|chr6:83918028-83918028|A/G|missense_variant'] 73333 17071 NELNQWLS True PC9_epitope_Rep5 1002.4770594676199 1002.47596993586 70.683 2 -1.1455802430048374 0.34977435962626324 1.0 ['nc|ENSG00000105808|O43374-2|RASA4', 'ENSG00000170667|ENST00000465829|RASA4B', 'ENSG00000105808|ENST00000262940|RASA4', 'ENST00000495352.5_1_7:102124102-102135092:-|nuORF', 'ENST00000522223.1_7:102223281-102234330:-|nuORF', 'ENST00000523568.1_7:102228019-102246337:-|nuORF', 'ENST00000446874.5_1_7:44073712-44078582:-|nuORF', 'ENST00000418411.6_1_12:113540888-113573291:-|nuORF', 'nc|ENSG00000111344|O95294-2|RASAL1', 'nc|ENSG00000111344|O95294|RASAL1', 'ENSG00000111344|ENST00000548055|RASAL1', 'nc|ENSG00000111344|O95294-3|RASAL1'] 7472 10240 ASDQIRSAI True PC9_epitope_Rep3 959.5036085686299 959.50250993586 44.338 2 -1.145704812352806 0.3498163143376511 1.0 ['ENST00000514498.1_1_4:166327046-166327295:-|nuORF'] 3284 13826 AGGGADGF True NCI_RA007_Epitope_Rep3 650.2660040722201 650.26545496793 61.715 1 -1.1457165032603405 0.3498163143376511 1.0 ['ENSG00000171055|ENST00000405912|FEZ2', 'nc|ENSG00000171055|Q9UHY8-2|FEZ2'] 64346 16155 LQNRRLFQSLH True PC9_epitope_Rep3 1410.7844152896998 1410.7833099358602 67.285 2 -1.1458277574883098 0.3498627141912849 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 80575 12697 PLNLSKKSEI True H1975_Epitope_Rep3 1127.65502382959 1127.65392993586 54.05 2 -1.1458849781497171 0.34990911286529636 1.0 ['ENSG00000141579|ENST00000269394|ZNF750'] 98663 6436 SIPVPTHYY True NCI_RA007_Epitope_Rep2 1075.5338460677501 1075.53274993586 29.642 2 -1.1459668197280088 0.3499339027862518 1.0 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 124745 16685 VLKKKKKKKK True PC9_epitope_Rep3 1254.92274668582 1254.9211049037901 69.314 3 -1.1460795244873325 0.3499339027862518 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 7704 13236 ASQPADSATY True H1975_Epitope_Rep3 1009.43525422529 1009.43414993586 56.167 2 -1.146082755881969 0.3499339027862518 1.0 ['nc|ENSG00000211780|A0A075B6T7|TRAV6'] 62615 11317 LLVLGLKAL True NCI_RA007_Epitope_Rep3 938.65283900162 938.65174993586 51.626 2 -1.146111451479482 0.34993771767038667 1.0 ['nc|ENSG00000197858|O43292-2|GPAA1', 'ENSG00000197858|ENST00000355091|GPAA1', 'ENST00000531593.1_1_8:145139661-145140095:+|nuORF', 'ENST00000530796.1_1_8:145139736-145140383:+|nuORF'] 17375 4975 EHEVRLSP True H1975_Epitope_Rep2 965.4930438849299 965.49194993586 24.219 2 -1.1461427552278718 0.34993771767038667 1.0 ['ENSG00000205730|ENST00000381440|ITPRIPL2', 'ENST00000566735.1_1_16:19125342-19127388:+|nuORF', 'ENST00000564808.6_1_16:19125342-19138551:+|nuORF'] 99959 10228 SLINLQTL True PC9_epitope_Rep2 900.5280324113199 900.52692993586 44.678 2 -1.1461948436556542 0.34997140133460436 1.0 ['ENST00000482284.5_1_1:155580039-155581071:+|nuORF'] 71736 5242 MMHCMWWERWM True NCI_RA007_Epitope_Rep1 1625.6222439399698 1625.62114993586 24.473 2 -1.1462277241122156 0.34997966342976256 1.0 ['ENST00000301180.9_1_12:51133363-51135252:+|nuORF'] 19349 19551 ELNGFFNKL True PC9_epitope_Rep3 1080.5603951687601 1080.55928993586 80.437 2 -1.146336247187505 0.3500641864839788 1.0 ['nc|ENSG00000059377|P24557-2|TBXAS1', 'ENSG00000059377|ENST00000448866|TBXAS1', 'nc|ENSG00000059377|P24557-3|TBXAS1', 'ENST00000462275.5_1_7:139529186-139716213:+|nuORF', 'nc|ENSG00000059377|P24557-4|TBXAS1'] 17897 6145 EIDKNQINI True H1975_Epitope_Rep2 1085.57168812845 1085.5705899358602 28.609 2 -1.1463558804968546 0.35008070768565946 1.0 ['nc|ENSG00000196091|Q00872-5|MYBPC1', 'nc|ENSG00000196091|Q00872-9|MYBPC1', 'nc|ENSG00000196091|Q00872-8|MYBPC1', 'nc|ENSG00000196091|Q00872-10|MYBPC1', 'ENSG00000196091|ENST00000361466|MYBPC1', 'nc|ENSG00000196091|Q00872-3|MYBPC1', 'nc|ENSG00000196091|Q00872-7|MYBPC1', 'nc|ENSG00000196091|Q00872-2|MYBPC1', 'nc|ENSG00000196091|Q00872|MYBPC1', 'nc|ENSG00000196091|Q00872-6|MYBPC1'] 38332 18842 HFYFQFLF True PC9_epitope_Rep4 1147.5491022090698 1147.5480099358601 80.563 2 -1.1463709010527363 0.35008070768565946 1.0 ['ENST00000490870.5_1_1:109968058-109968307:-|nuORF'] 45929 17240 ISRWFEVERRE True PC9_epitope_Rep5 1505.77391017565 1505.77280993586 71.33 2 -1.1463994135558828 0.3501016776817489 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 82383 22038 PTVRPAPPWL True PC9_epitope_Rep3 1132.6393141958 1132.63820993586 90.067 2 -1.1464339995427393 0.3501226471447999 1.0 ['ENST00000268171.7_1_15:91426009-91426111:+|nuORF'] 29685 17596 FVNLKTVL True PC9_epitope_Rep6 932.5695033004799 932.56840993586 80.325 2 -1.1464502088265986 0.35013026625150917 1.0 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B'] 100024 5706 SLKEASSEHL True NCI_RA007_Epitope_Rep3 1099.55095268387 1099.54984993586 29.42 2 -1.1464578385937998 0.35013026625150917 1.0 ['ENST00000405409.6_2_22:36137158-36137320:-|nuORF'] 27428 22564 FNIHPPLKR True PC9_epitope_Rep4 1120.65054758584 1120.64944993586 95.032 2 -1.1464587032769105 0.35013026625150917 1.0 ['ENST00000441284.5_2_13:46917522-46942212:-|nuORF', 'nc|ENSG00000102445|Q9H714-6|RUBCNL', 'nc|ENSG00000102445|Q9H714-3|RUBCNL', 'nc|ENSG00000102445|Q9H714-4|RUBCNL', 'ENSG00000102445|ENST00000429979|RUBCNL'] 17376 4587 EHEWEQIIDIL True H1975_Epitope_Rep3 1423.6983451935498 1423.69669490379 22.765 3 -1.1464642932451963 0.35013026625150917 1.0 ['nc|ENSG00000086717|O14829-2|PPEF1', 'ENSG00000086717|ENST00000470157|PPEF1'] 48264 6645 KDKANMQHR True H1975_Epitope_Rep1 1126.5665602617 1126.5654699358602 30.613 2 -1.1465060702569279 0.35013407551437975 1.0 ['ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000502904.5_1_5:179043989-179045371:-|nuORF'] 121974 19654 VGPVKGVF True PC9_epitope_Rep1 801.4748746396499 801.47376993586 80.423 2 -1.1465396492995128 0.35013407551437975 1.0 ['nc|ENSG00000170322|Q6P4R8-3|NFRKB', 'ENSG00000170322|ENST00000682444|NFRKB', 'nc|ENSG00000170322|Q6P4R8-2|NFRKB'] 23443 13348 EVWFYDGKYHL True PC9_epitope_Rep5 1455.68230120659 1455.6806549037901 56.358 3 -1.14657815301894 0.3501677511183408 1.0 ['ENST00000507454.1_1_4:128812246-128813710:+|nuORF'] 109076 13387 TFENYYRKQRR True H1975_Epitope_Rep1 1559.7957082493897 1559.79460993586 56.603 2 -1.1466225193685082 0.3501836249729963 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 6521 11906 APVAAPVAA True PC9_epitope_Rep4 765.43848913093 765.43738993586 53.576 2 -1.146696089829551 0.3501836249729963 1.0 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C'] 84405 8088 QGEVTVASIDD True PC9_epitope_Rep3 1132.52479750568 1132.52370993586 36.085 2 -1.146699608582499 0.3501836249729963 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 79503 5720 PGQGPTEEAR True PC9_epitope_Rep3 1040.4886867804798 1040.4875899358601 27.074 2 -1.1467093724802957 0.3501836249729963 1.0 ['ENST00000457926.5_1_16:90039106-90044150:+|nuORF'] 123263 21971 VHPRVGRRRRS True PC9_epitope_Rep6 1374.8181154598199 1374.8164649037901 97.43 3 -1.1467222680840867 0.3501836249729963 1.0 ['ENST00000597790.5_1_19:50879837-50880852:+|nuORF'] 32245 11697 GFIKKFVL True NCI_RA007_Epitope_Rep4 950.5953241254999 950.59422993586 51.955 2 -1.146750096913276 0.3501950469510413 1.0 ['ENSG00000100664|ENST00000216554|EIF5', 'ENST00000559923.1_1_14:103803111-103803587:+|nuORF', 'ENST00000561023.1_1_14:103803039-103803276:+|nuORF'] 117445 7252 VADTFQDYFG True H1975_Epitope_Rep3 1161.4978544818498 1161.4967499358602 32.867 2 -1.1467613289957945 0.3501950469510413 1.0 ['ENSG00000185009|ENST00000355264|AP3M1'] 25080 3325 FDFWFEIFDMK True NCI_RA007_Epitope_Rep2 1523.6795243252698 1523.6778749037899 17.596 3 -1.1467754557891048 0.3501950469510413 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7'] 138102 20575 YQGKLRRR True NCI_RA007_Epitope_Rep2 1075.6362945040298 1075.6351899358601 85.104 2 -1.1467982513271515 0.3501950469510413 1.0 ['ENSG00000130775|ENST00000373921|THEMIS2'] 135725 7209 YEKDKERE True NCI_RA007_Epitope_Rep2 1095.5196525555898 1095.5185499358602 32.661 2 -1.1468178209687514 0.3501950469510413 1.0 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3'] 118324 12667 VDENFRPRNE True NCI_RA007_Epitope_Rep2 1274.6003624877796 1274.59926993586 53.885 2 -1.146822377037513 0.3501950469510413 1.0 ['PZP|p.I1373Sfs*13|1|0.39|ENSG00000126838|chr12:9152829-9152829|G/-|frameshift_variant', 'ENSG00000126838|ENST00000261336|PZP', 'PZP|p.P260Qfs*6|1|0.3|ENSG00000126838|chr12:9197100-9197100|G/-|frameshift_variant', 'PZP|p.T1230Nfs*10|1|0.38|ENSG00000126838|chr12:9154701-9154702|-/T|frameshift_variant', 'nc|ENSG00000126838|P20742-2|PZP'] 82535 20439 PVFQSSHY True PC9_epitope_Rep5 963.4450310633499 963.4444849679301 83.657 1 -1.1468415550022641 0.35020266063555394 1.0 ['ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 133321 5883 WERPLWERDSF True PC9_epitope_Rep2 1519.72081197363 1519.71916490379 28.023 3 -1.146912526997376 0.35020266063555394 1.0 ['ENST00000489671.5_2_3:141666651-141666756:-|nuORF'] 14795 14575 DYARRSYANIK True NCI_RA007_Epitope_Rep2 1355.6945972257897 1355.6935099358602 61.358 2 -1.1469209734872086 0.35020266063555394 1.0 ['ENSG00000127989|ENST00000351870|MTERF1'] 78756 13572 PEHLLTFSNLR True H1975_Epitope_Rep3 1325.70918466077 1325.70808993586 57.487 2 -1.1469260411534077 0.35020266063555394 1.0 ['nc|ENSG00000184056|Q9H267-2|VPS33B', 'ENSG00000184056|ENST00000333371|VPS33B'] 124144 24095 VKVLPIPVL True NCI_RA007_Epitope_Rep4 976.6684890657599 976.66738993586 104.46 2 -1.1469394884663808 0.3502109168530189 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'nc|ENSG00000127838|Q8N490-4|PNKD', 'nc|ENSG00000127838|Q8N490-3|PNKD'] 87281 23289 QSSVVRCRPLT True PC9_epitope_Rep5 1244.6659399497998 1244.66484993586 94.565 2 -1.1469853835963468 0.3502318785337653 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 28444 10477 FSEIEAEKN True H1975_Epitope_Rep1 1065.4978544818498 1065.4967499358602 45.255 2 -1.14712797927433 0.35029921099775113 1.0 ['nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 49553 24419 KKIAFRLKK True PC9_epitope_Rep5 1130.7651834152598 1130.76408993586 98.966 2 -1.1471443035373354 0.35029921099775113 1.0 ['ENSG00000205327|ENST00000548615|OR6C68'] 122074 4892 VGRAPKQA True PC9_epitope_Rep6 825.48208527841 825.48098993586 26.36 2 -1.1472788908291547 0.3503284249577558 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 112006 13312 TLSQSVILP True PC9_epitope_Rep2 956.5542471591599 956.55314993586 56.479 2 -1.1472921323900702 0.3503284249577558 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 121570 10993 VGKSLKDL True PC9_epitope_Rep6 858.51746772762 858.51636993586 53.175 2 -1.1474625337273052 0.3503398335768278 1.0 ['ENST00000403332.2_1_6:129478670-129479855:-|nuORF'] 121829 9458 VGNIWVCY True NCI_RA007_Epitope_Rep5 952.4476739156398 952.44656993586 43.016 2 -1.1474858046871361 0.3503398335768278 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2', 'nc|ENSG00000117479|O60779-2|SLC19A2'] 95734 24866 SCCCTHCC True NCI_RA007_Epitope_Rep1 858.19510733838 858.19455496793 102.93 1 -1.1474916035964464 0.3503398335768278 1.0 ['ENSG00000204323|ENST00000375215|SMIM5'] 83798 15474 QEELRKIQEQL True NCI_RA007_Epitope_Rep1 1412.76234243244 1412.7612499358602 64.273 2 -1.1475059809318071 0.3503398335768278 1.0 ['ENSG00000134852|ENST00000513440|CLOCK', 'ENST00000511124.1_1_4:56304552-56315592:-|nuORF'] 2872 7786 AEYMNHLTDIG True PC9_epitope_Rep2 1262.56013746858 1262.55904993586 35.322 2 -1.1475062015510598 0.3503398335768278 1.0 ['AMY2A|p.I202T|2|0.08|ENSG00000243480|chr1:103619645-103619645|T/C|missense_variant'] 80997 25425 PNQALAITK True PC9_epitope_Rep2 954.5498304850599 954.54872993586 103.48 2 -1.1475303939924868 0.3503398335768278 1.0 ['nc|ENSG00000143552|Q5VU65-2|NUP210L', 'ENSG00000143552|ENST00000368559|NUP210L'] 33320 19787 GLDNILGFV True PC9_epitope_Rep4 946.5123823471799 946.51128993586 84.237 2 -1.147615189092504 0.35035188902157066 1.0 ['ENST00000374928.7_1_X:56313944-56314022:+|nuORF'] 118017 11777 VASRGWRQAA True PC9_epitope_Rep1 1100.5839245779998 1100.5828299358602 50.172 2 -1.1476468144602068 0.35035188902157066 1.0 ['ENST00000506402.5_1_4:515617-515826:+|nuORF'] 14359 7080 DTEEKVGLK True NCI_RA007_Epitope_Rep2 1017.5342399905699 1017.53314993586 32.164 2 -1.1476611221406492 0.35035188902157066 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-5|FMN1', 'nc|ENSG00000248905|Q68DA7-3|FMN1'] 4912 11472 ALGRWAWPRR True NCI_RA007_Epitope_Rep5 1267.70504277019 1267.70394993586 50.777 2 -1.1477059838734556 0.3503601417700936 1.0 ['ENST00000521871.5_1_2:73496869-73511371:-|nuORF'] 64848 11819 LSALWEAKA True PC9_epitope_Rep2 987.5389314481899 987.53782993586 50.791 2 -1.1477185748074974 0.3503639435474651 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|78|2|anti-sense'] 88048 4544 QVVCARCSDYR True NCI_RA007_Epitope_Rep3 1298.5859753769398 1298.58486993586 24.742 2 -1.1477245582299758 0.3503639435474651 1.0 ['ENST00000493635.1_1_6:36993330-36995936:+|nuORF'] 129712 18867 VTKARLTDK True NCI_RA007_Epitope_Rep2 1030.61349337078 1030.6123899358602 78.209 2 -1.1478268958077322 0.35037219582835805 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 95492 10317 SAPAFNSI True PC9_epitope_Rep5 805.39701824177 805.39592993586 44.67 2 -1.1478715706976452 0.35038869976119097 1.0 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 80998 24765 PNQALAITK True PC9_epitope_Rep4 954.5498304850599 954.54872993586 103.76 2 -1.1478776627965857 0.35038869976119097 1.0 ['nc|ENSG00000143552|Q5VU65-2|NUP210L', 'ENSG00000143552|ENST00000368559|NUP210L'] 100764 12175 SLRPLLMLA True H1975_Epitope_Rep1 1012.61032256664 1012.60922993586 51.85 2 -1.1479846748503582 0.3504223563035884 1.0 ['CON__Q3ZBS7'] 56149 11171 LDNEWDRDYGR True NCI_RA007_Epitope_Rep2 1437.6273055116098 1437.62620993586 48.033 2 -1.1480148725403752 0.3504306074232147 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant'] 2511 4579 AEQRDPAAPEP True H1975_Epitope_Rep2 1179.5520153130296 1179.55090993586 22.717 2 -1.1480997162919935 0.35046426257827684 1.0 ['UBE2E3|p.D23E|2|0.35|ENSG00000170035|chr2:180982111-180982111|C/A|missense_variant'] 89864 14362 RFLSRFKTR True H1975_Epitope_Rep2 1209.70945944429 1209.70780490379 60.394 3 -1.1481085787869576 0.35046806132428965 1.0 ['ENST00000557388.1_1_14:67864733-67878776:-|nuORF'] 19159 17449 ELIYKQPAV True PC9_epitope_Rep3 1059.59644632431 1059.5953499358602 72.292 2 -1.1481181610686464 0.35046806132428965 1.0 ['ENSG00000214021|ENST00000685419|TTLL3', 'nc|ENSG00000214021|Q9Y4R7-5|TTLL3', 'nc|ENSG00000214021|Q9Y4R7|TTLL3', 'ENST00000496526.5_1_3:9870593-9876502:+|nuORF', 'ENST00000473661.5_1_3:9867594-9876502:+|nuORF'] 94167 13157 RWLEKEERFLK True NCI_RA007_Epitope_Rep2 1532.8463468399198 1532.84470490379 55.81 3 -1.1482548316215475 0.3505010605464037 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 46053 18896 ISWINIYAQVQ True PC9_epitope_Rep5 1333.70303665117 1333.70192993586 77.703 2 -1.148272020999948 0.3505010605464037 1.0 ['SORCS3|p.P1151S|1|0.3|ENSG00000156395|chr10:105262338-105262338|C/T|missense_variant'] 23632 12972 EYFVYTIRDR True PC9_epitope_Rep5 1360.6775501793197 1360.67644993586 54.906 2 -1.1482906567267954 0.3505010605464037 1.0 ['ENSG00000119900|ENST00000370435|OGFRL1'] 14827 5425 DYDYLSDWVP True NCI_RA007_Epitope_Rep1 1271.53463391339 1271.53297490379 25.174 3 -1.1482920945509 0.3505010605464037 1.0 ['CDH9|p.G771V|1|0.39|ENSG00000113100|chr5:26881194-26881194|C/A|missense_variant'] 68063 9556 LTNPWNIMIK True NCI_RA007_Epitope_Rep1 1228.66381469148 1228.6627099358602 41.168 2 -1.1483431839172826 0.35053025973201246 1.0 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 111619 8562 TLNQRVAL True PC9_epitope_Rep2 913.5345147740899 913.53340993586 38.294 2 -1.1483622699438767 0.35053025973201246 1.0 ['ENST00000492329.5_1_3:49721463-49723185:-|nuORF', 'nc|ENSG00000173531|P26927|MST1', 'ENSG00000173531|ENST00000449682|MST1', 'nc|ENSG00000186715|Q2TV78-2|MST1L', 'nc|ENSG00000186715|Q2TV78|MST1L'] 99530 5047 SLETSETIIK True NCI_RA007_Epitope_Rep1 1119.6023195503901 1119.6012299358601 23.716 2 -1.1483795592136148 0.35055500520714267 1.0 ['ENST00000512630.5_1_4:143352506-143435382:-|nuORF', 'ENST00000262992.8_1_4:143352506-143383885:-|nuORF'] 26899 7423 FLFYFIYFIFR True NCI_RA007_Epitope_Rep3 1574.8325942687395 1574.83093490379 36.324 3 -1.1484161984932917 0.35055500520714267 1.0 ['ENST00000590478.1_1_17:33569582-33569933:-|nuORF'] 90306 19940 RHWQWWRVFTK True NCI_RA007_Epitope_Rep1 1628.8476842526 1628.84658993586 81.766 2 -1.1484194741592826 0.35055500520714267 1.0 ['nc|ENSG00000133026|P35580|MYH10', 'nc|ENSG00000133026|P35580-5|MYH10', 'nc|ENSG00000133026|P35580-2|MYH10', 'nc|ENSG00000133026|P35580-3|MYH10', 'ENSG00000133026|ENST00000360416|MYH10'] 89919 23282 RFTCLYRVR True PC9_epitope_Rep6 1212.6549813432798 1212.65332490379 102.65 3 -1.1485755816972287 0.35057595346651593 1.0 ['ENSG00000061656|ENST00000374273|SPAG4'] 15571 9734 EATEELRR True H1975_Epitope_Rep3 1002.5094222250599 1002.50832993586 42.463 2 -1.1486289491905732 0.3505784347340216 1.0 ['ENSG00000172037|ENST00000305544|LAMB2', 'ENST00000477225.1_1_3:49160862-49161360:-|nuORF'] 117980 4394 VASEGLPEPV True H1975_Epitope_Rep3 996.5127762699999 996.51166993586 22.022 2 -1.1486359513462443 0.3505784347340216 1.0 ['ENSG00000105364|ENST00000253099|MRPL4', 'nc|ENSG00000105364|Q9BYD3-2|MRPL4', 'ENST00000588963.1_1_19:10363075-10363378:+|nuORF'] 83242 8632 QADITYEGRQK True NCI_RA007_Epitope_Rep1 1307.6469783270297 1307.6458899358602 37.578 2 -1.1487009710735967 0.3505784347340216 1.0 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 22072 11255 ESSKFYLCWK True H1975_Epitope_Rep3 1289.6114447654497 1289.61034993586 48.396 2 -1.1487103466294524 0.3505784347340216 1.0 ['nc|ENSG00000176406|Q9UQ26-4|RIMS2'] 92006 17583 RPRRPRRWWRQ True H1975_Epitope_Rep3 1648.9399619279998 1648.93886993586 73.445 2 -1.1487573440796397 0.3505784347340216 1.0 ['ENST00000372022.5_1_9:136199397-136199478:-|nuORF'] 72750 5949 NADETWWIFHL True NCI_RA007_Epitope_Rep4 1430.6619001151798 1430.66080993586 29.503 2 -1.1487655742427902 0.3505784347340216 1.0 ['nc|ENSG00000158488|P15812-10|CD1E', 'nc|ENSG00000158488|P15812-3|CD1E'] 57651 11396 LELWVNYYVRW True NCI_RA007_Epitope_Rep2 1539.7874349814701 1539.78632993586 48.918 2 -1.1488243384701173 0.3505784347340216 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 71628 9216 MLNQSYER True PC9_epitope_Rep3 1039.4756795686299 1039.4745899358602 40.387 2 -1.1488390391333723 0.3505784347340216 1.0 ['ENST00000570330.5_1_17:6544469-6545099:+|nuORF'] 36752 21986 GVPARRGQ True PC9_epitope_Rep6 839.4725832238698 839.4720349679301 97.49 1 -1.1488839959527644 0.35058668156651596 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'nc|ENSG00000075702|O43379-3|WDR62', 'ENST00000378860.8_1_19:36545867-36564559:+|nuORF', 'nc|ENSG00000075702|O43379-2|WDR62', 'ENST00000608676.1_1_19:36545867-36550933:+|nuORF'] 133423 8379 WFWQDRFWLPP True PC9_epitope_Rep3 1576.7615545867998 1576.7599049037901 37.197 3 -1.1488998187788033 0.35059492818956434 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 48221 3381 KCVELTEG True PC9_epitope_Rep2 877.4215187374499 877.4204299358599 18.275 2 -1.1489144872805572 0.3505987225559041 1.0 ['ENSG00000113328|ENST00000340828|CCNG1', 'nc|ENSG00000113328|P51959-2|CCNG1'] 127290 21540 VQLLKLFV True PC9_epitope_Rep5 958.6215388733399 958.62044993586 87.89 2 -1.1489437462022236 0.3505987225559041 1.0 ['SSTR4|p.N282K|1|0.1|ENSG00000132671|chr20:23036329-23036329|C/A|missense_variant'] 117508 5794 VAEVEPQSQPQ True NCI_RA007_Epitope_Rep2 1210.5829810881398 1210.58188993586 27.155 2 -1.148948491333678 0.3506069687119057 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 24616 10865 FAPPDIAP True PC9_epitope_Rep6 826.4225047136199 826.42140993586 52.65 2 -1.1489771078140407 0.35061076262793 1.0 ['RABEPK-PIK3R1|1|fusion', 'ENST00000517412.1_1_5:67522458-67569396:+|nuORF', 'PIK3R1|p.A360Efs*15|1|0.49|ENSG00000145675|chr5:68293151-68293152|-/ACGAG|frameshift_variant', 'PIK3R1|p.K575Rfs*24|1|0.22|ENSG00000145675|chr5:68295301-68295308|AAAGACGA/-|frameshift_variant', 'ENSG00000145675|ENST00000521381|PIK3R1', 'nc|ENSG00000145675|P27986-4|PIK3R1'] 57143 11025 LEEQRGAL True PC9_epitope_Rep2 914.4821448480599 914.48104993586 47.727 2 -1.149026839163184 0.35061076262793 1.0 ['ENSG00000165633|ENST00000332853|VSTM4', 'nc|ENSG00000165633|Q8IW00-2|VSTM4'] 55751 7664 LDDWIQQVET True H1975_Epitope_Rep1 1245.5877321154098 1245.5866299358602 34.452 2 -1.1491144372930515 0.35062725379653614 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-3|DST'] 28142 18805 FRKKKREQ True NCI_RA007_Epitope_Rep4 1118.6672602791398 1118.6661699358601 81.354 2 -1.1491186665588646 0.35062725379653614 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 92802 15124 RRLENRFYRRI True NCI_RA007_Epitope_Rep2 1577.9015107306097 1577.9004099358601 63.517 2 -1.1492043845987285 0.3506481963508006 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'ENST00000473691.1_1_X:79938122-79975072:-|nuORF'] 126307 23362 VPIMELPT True NCI_RA007_Epitope_Rep4 898.4833907180199 898.48228993586 101.43 2 -1.1492180341183775 0.3506564412504127 1.0 ['ENSG00000130226|ENST00000377770|DPP6', 'nc|ENSG00000130226|P42658-2|DPP6'] 78847 12766 PERLVPVSPL True PC9_epitope_Rep6 1105.64954452633 1105.64844993586 60.599 2 -1.1492661630299033 0.35070277682550566 1.0 ['ENSG00000124217|ENST00000244051|MOCS3'] 82552 10703 PVGGHCRG True H1975_Epitope_Rep3 781.36534127401 781.36424993586 46.245 2 -1.1495328488789567 0.3507611441920699 1.0 ['ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 121460 5031 VGIPGLGPTI True NCI_RA007_Epitope_Rep3 922.5487678559 922.54766993586 26.784 2 -1.1495497688950294 0.3507611441920699 1.0 ['ENSG00000197428|ENST00000641817|OR51D1'] 127992 24174 VRQGPGGL True NCI_RA007_Epitope_Rep2 782.4398861132598 782.43878993586 101.53 2 -1.1495543466155527 0.3507611441920699 1.0 ['ENST00000571210.1_1_17:19287777-19288718:-|nuORF'] 14525 10325 DVAELPVPP True PC9_epitope_Rep2 935.4963979298699 935.49530993586 45.042 2 -1.1495575651222076 0.3507611441920699 1.0 ['ENST00000589138.5_1_19:14029331-14037891:+|nuORF', 'nc|ENSG00000132024|Q6P1N0-2|CC2D1A', 'ENSG00000132024|ENST00000318003|CC2D1A', 'ENST00000585896.5_1_19:14020678-14030767:+|nuORF'] 101443 759 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 4.2667 2 -1.1496028398588671 0.35078208318521154 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 59182 6725 LGFNTLGT True PC9_epitope_Rep5 821.42831837005 821.4272299358599 30.838 2 -1.1496264629778936 0.3507903256522567 1.0 ['ENST00000371142.8_1_10:98281879-98281930:-|nuORF'] 93322 24430 RRSRARRPAW True H1975_Epitope_Rep1 1310.7544525741 1310.7533499358601 101.28 2 -1.1496937891065988 0.35081126374323945 1.0 ['ENST00000368352.9_1_1:155292852-155294901:+|nuORF'] 684 8002 AAVDAGMAM-[Oxidation] True PC9_epitope_Rep5 851.35172530591 851.35062993586 35.718 2 -1.1497099974894964 0.35081950563053055 1.0 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 6243 8748 APRLAYSSA True PC9_epitope_Rep4 934.4872302284999 934.48612993586 41.156 2 -1.1498005203928043 0.35084044281941906 1.0 ['ENSG00000104722|ENST00000221166|NEFM'] 74449 13693 NIYYYLEDDSM True PC9_epitope_Rep1 1424.58059812964 1424.5795099358602 57.522 2 -1.1498528861161836 0.3508613794766977 1.0 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-2|EFHC1'] 126190 17701 VPGIVALQ True PC9_epitope_Rep3 795.48543932335 795.48434993586 73.284 2 -1.149936879246993 0.35091594622386413 1.0 ['nc|ENSG00000293518|Q5YKI7-2|GGNBP1', 'nc|ENSG00000293518|Q5YKI7|GGNBP1'] 55380 16824 LASQISQL True PC9_epitope_Rep1 858.4810822188999 858.47998993586 69.539 2 -1.1499392963242883 0.35091594622386413 1.0 ['CUX1|p.S320L|1|0.35|ENSG00000257923|chr7:102178599-102178599|C/T|missense_variant'] 111024 17032 TLDLRWAV True PC9_epitope_Rep1 972.53926580136 972.53816993586 70.337 2 -1.1499469443698673 0.35092418625907684 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'ENST00000524657.1_1_11:67020024-67022523:+|nuORF'] 62083 24732 LLNGKKRRRWI True NCI_RA007_Epitope_Rep5 1438.8997198254597 1438.89862993586 102.62 2 -1.1499900835271657 0.3509324260850799 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 109494 8482 TGYRRQPPQRL True NCI_RA007_Epitope_Rep4 1370.7531151614198 1370.75200993586 39.429 2 -1.1500964154878164 0.3509475634988132 1.0 ['LRRC31|p.S47Afs*45|1|0.26|ENSG00000114248|chr3:169869670-169869670|G/-|frameshift_variant'] 69450 13575 LVRTDAKTI True PC9_epitope_Rep1 1015.6025943339099 1015.60148993586 57.072 2 -1.1500965430985282 0.3509475634988132 1.0 ['ENST00000491974.1_1_1:159807783-159824677:-|nuORF'] 5517 16935 ANDNSLFVLYP True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 70.556 2 -1.1501164803238624 0.3509475634988132 1.0 ['PCDHB13|p.P559L|1|0.1|ENSG00000187372|chr5:141215799-141215799|C/T|missense_variant'] 67185 10256 LTDHRPGERGC True H1975_Epitope_Rep2 1239.57785322139 1239.57674993586 44.456 2 -1.1501316116848235 0.3509475634988132 1.0 ['ENST00000476102.1_1_1:159898784-159904055:-|nuORF'] 448 7696 AALTCWKTFL True PC9_epitope_Rep3 1152.6001518057599 1152.5985149037901 34.599 3 -1.1502307044141602 0.3509475634988132 1.0 ['nc|ENSG00000089876|Q7L7V1-2|DHX32', 'ENSG00000089876|ENST00000284690|DHX32'] 43587 8688 IIGDIGPK True NCI_RA007_Epitope_Rep4 811.4803539429099 811.47924993586 40.207 2 -1.1502683981830266 0.3509475634988132 1.0 ['ENSG00000168306|ENST00000302819|ACOX2'] 111885 12240 TLRQWIYYFPK True H1975_Epitope_Rep1 1513.80817042605 1513.80706993586 52.103 2 -1.1502741255047215 0.3509475634988132 1.0 ['ENSG00000095110|ENST00000534921|NXPE1', 'nc|ENSG00000095110|Q8N323-2|NXPE1', 'NXPE1|p.H401Tfs*2|1|0.11|ENSG00000095110|chr11:114522411-114522412|-/T|frameshift_variant'] 16279 19617 EEIIFNGIADW True H1975_Epitope_Rep1 1305.62411762413 1305.6230299358601 81.665 2 -1.1502875109837134 0.3509475634988132 1.0 ['DPP10|p.L346Kfs*5|1|0.17|ENSG00000175497|chr2:115753257-115753293|TCCTCACAGTCTGTGAGACCACTACAGGTGCTTGTAG/-|frameshift_variant', 'nc|ENSG00000175497|Q8N608-4|DPP10', 'nc|ENSG00000175497|Q8N608-2|DPP10', 'ENSG00000175497|ENST00000410059|DPP10', 'nc|ENSG00000175497|Q8N608-3|DPP10'] 37807 21336 HDARLLRTIP True NCI_RA007_Epitope_Rep2 1190.68838964654 1190.6867549037902 88.277 3 -1.1503216807637076 0.35096404046558266 1.0 ['nc|ENSG00000119599|Q8WV16-4|DCAF4', 'nc|ENSG00000119599|Q8WV16-3|DCAF4', 'nc|ENSG00000119599|Q8WV16-5|DCAF4', 'ENSG00000119599|ENST00000358377|DCAF4'] 68400 8187 LTSVPSDRSP True H1975_Epitope_Rep3 1057.54038800017 1057.53928993586 36.471 2 -1.150373256104117 0.35096404046558266 1.0 ['ENSG00000158158|ENST00000377075|CNNM4', 'nc|ENSG00000158158|Q6P4Q7-2|CNNM4'] 47043 7653 IVSPPLPAPP True NCI_RA007_Epitope_Rep3 986.5800679841799 986.57896993586 37.226 2 -1.1504372891210333 0.3509722786352559 1.0 ['ENST00000560349.1_1_14:24531731-24532082:+|nuORF'] 31936 9422 GERPYACPDC True H1975_Epitope_Rep1 1109.4270151240498 1109.42590993586 41.154 2 -1.150572149710644 0.35097538996560435 1.0 ['nc|ENSG00000214022|Q9BWE0|REPIN1', 'ENSG00000214022|ENST00000489432|REPIN1'] 134055 18269 WQKEEGRIITK True NCI_RA007_Epitope_Rep2 1386.7619485096195 1386.76030490379 75.82 3 -1.150588521461854 0.35097538996560435 1.0 ['ENST00000230480.10_1_6:43742087-43745211:+|nuORF'] 58209 9109 LESRDQAW True PC9_epitope_Rep2 1003.4723084403498 1003.47120993586 40.378 2 -1.1505890619770722 0.35097538996560435 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 22876 4996 EVETFLDR True NCI_RA007_Epitope_Rep2 1007.4923751785899 1007.49126993586 24.057 2 -1.150593273988152 0.35097538996560435 1.0 ['ENSG00000128655|ENST00000286063|PDE11A'] 80848 9018 PLVAHVAS True PC9_epitope_Rep6 792.4493881678 792.44828993586 44.721 2 -1.1506104920347762 0.35097538996560435 1.0 ['ENST00000393800.6_2_11:68382148-68382592:+|nuORF'] 164 24850 AADRRRYRR True PC9_epitope_Rep1 1218.6806189274998 1218.67952993586 100.49 2 -1.150642078792926 0.35097917274815654 1.0 ['nc|ENSG00000060138|P16989-3|YBX3', 'ENSG00000060138|ENST00000228251|YBX3', 'nc|ENSG00000060138|P16989-2|YBX3', 'ENST00000542002.5_1_12:10853889-10868397:-|nuORF'] 48292 9903 KDLKDFIRVHR True NCI_RA007_Epitope_Rep2 1425.82046644525 1425.81936993586 43.148 2 -1.1506427161143 0.35097917274815654 1.0 ['ENSG00000089558|ENST00000264661|KCNH4'] 70594 11288 LYYVYMGLL True PC9_epitope_Rep5 1133.5831047592899 1133.58200993586 48.412 2 -1.1506878762083077 0.35098740988932886 1.0 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF', 'ENST00000533687.1_1_11:118969111-118971155:-|nuORF'] 81575 20941 PRKLELRQLST True NCI_RA007_Epitope_Rep4 1339.7935829910698 1339.79194490379 90.75 3 -1.1506989179523992 0.35099564682141815 1.0 ['CCKAR|p.G398Efs*24|1|0.41|ENSG00000163394|chr4:26481732-26481732|C/-|frameshift_variant', 'ENSG00000163394|ENST00000295589|CCKAR'] 16653 19236 EETERKKEYIF True H1975_Epitope_Rep1 1470.7354589782597 1470.73436993586 80.152 2 -1.150757581632417 0.3509994288977727 1.0 ['ENST00000548731.1_1_12:56544665-56551697:-|nuORF'] 29931 25968 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 107.45 3 -1.1508444331127923 0.3509994288977727 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 45825 17104 ISPRGAGYTF True PC9_epitope_Rep5 1067.53999407735 1067.5388899358602 70.812 2 -1.1509026425179814 0.35100321078213637 1.0 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENST00000523804.1_1_8:30651411-30651755:-|nuORF', 'ENSG00000113575|ENST00000481195|PPP2CA'] 105596 4993 SVEFSEEPFG True NCI_RA007_Epitope_Rep3 1126.4818700645399 1126.48021490379 26.638 3 -1.1509300564971043 0.35100321078213637 1.0 ['ENSG00000171298|ENST00000302262|GAA'] 46285 11054 ITEGFEAVK True PC9_epitope_Rep2 992.5178616504398 992.51676993586 47.838 2 -1.1509771089227776 0.35101144699104037 1.0 ['ENST00000419314.5_1_7:64498910-64527388:+|nuORF'] 99558 11682 SLFDSRGWPL True PC9_epitope_Rep1 1176.5927579262 1176.59110490379 49.812 3 -1.1511002581476566 0.3510450640236551 1.0 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 30456 10630 GAGGCGKA True PC9_epitope_Rep5 619.27479493411 619.27424496793 45.876 1 -1.1512187948807173 0.35107868020304567 1.0 ['GKN2|p.A166G|1|0.15|ENSG00000183607|chr2:68945426-68945426|G/C|missense_variant'] 99404 9989 SLEEAWPLHG True H1975_Epitope_Rep1 1137.5454733806098 1137.54436993586 43.357 2 -1.1513057989189628 0.3510869151406708 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1'] 65692 12496 LSHHRRRWSHR True NCI_RA007_Epitope_Rep1 1526.81917808898 1526.8180899358601 52.586 2 -1.1513506028531117 0.3511116186995584 1.0 ['LCE1F|p.R84W|1|0.09|ENSG00000240386|chr1:152776621-152776621|A/T|missense_variant'] 109089 13056 TFFEIYNGKL True PC9_epitope_Rep6 1230.6284747285797 1230.62683490379 61.823 3 -1.1513577579598526 0.3511116186995584 1.0 ['ENSG00000142945|ENST00000372224|KIF2C', 'nc|ENSG00000142945|Q99661-2|KIF2C'] 57095 10882 LEELNLPD True H1975_Epitope_Rep3 941.4705771048499 941.47002496793 46.94 1 -1.151362692755025 0.3511116186995584 1.0 ['nc|ENSG00000184220|Q9BQ75-2|CMSS1', 'ENSG00000184220|ENST00000421999|CMSS1', 'TBC1D23-C3orf26|2|fusion'] 122603 8796 VGTITGDRRI True PC9_epitope_Rep4 1086.61455599994 1086.6134499358602 41.352 2 -1.151411948135439 0.3511198528012182 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 98270 14963 SIFESEDRL True PC9_epitope_Rep5 1094.52440358286 1094.5233099358602 62.557 2 -1.151502636833031 0.3511222767817492 1.0 ['ENSG00000118292|ENST00000369099|C1orf54'] 64854 15500 LSANITGFLP True PC9_epitope_Rep1 1031.56514619603 1031.56404993586 64.443 2 -1.1515131272267485 0.3511222767817492 1.0 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 63556 20205 LPLDDGAAHV True PC9_epitope_Rep4 1006.5083595958998 1006.50726993586 85.856 2 -1.151560181046556 0.3511222767817492 1.0 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121878388-121880774:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 101441 634 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 3.5626 2 -1.151571750848364 0.3511222767817492 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 104281 13185 SSEEDYGEFEF True H1975_Epitope_Rep3 1337.4935569470497 1337.4924499358601 55.967 2 -1.151575291376297 0.3511222767817492 1.0 ['CON__Q28107'] 36963 14720 GVRILEFE True PC9_epitope_Rep4 961.5232813840499 961.52218993586 64.555 2 -1.1515800589990612 0.3511222767817492 1.0 ['ENSG00000128581|ENST00000315322|IFT22'] 128230 18492 VRVRGSGV True NCI_RA007_Epitope_Rep5 828.4929843152798 828.49188993586 77.955 2 -1.1516056463253233 0.3511222767817492 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 124143 24203 VKVLPIPVL True NCI_RA007_Epitope_Rep3 976.6684890657599 976.66738993586 104.77 2 -1.1516148590989719 0.3511222767817492 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'nc|ENSG00000127838|Q8N490-4|PNKD', 'nc|ENSG00000127838|Q8N490-3|PNKD'] 35104 17580 GRRLHRPL True NCI_RA007_Epitope_Rep5 1003.6151651366299 1003.61406993586 74.405 2 -1.1516212001187387 0.35113050980790217 1.0 ['ENST00000236671.6_2_11:1774778-1774826:-|nuORF'] 67975 13733 LTLQKPSP True H1975_Epitope_Rep1 882.51746772762 882.51691496793 57.963 1 -1.1516509432438105 0.3511469752334551 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 44643 20228 IPKNSHKKGAK True NCI_RA007_Epitope_Rep1 1206.7196897748202 1206.71858993586 82.888 2 -1.1516798744673182 0.3511469752334551 1.0 ['nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'BRD2|p.E413Gfs*5|1|0.23|ENSG00000204256|chr6:32977475-32977476|-/A|frameshift_variant'] 135041 22024 YAIRLNKPYIY True PC9_epitope_Rep5 1412.7816213250399 1412.7805299358602 89.742 2 -1.1517033225637496 0.3511634398233906 1.0 ['ENST00000426778.5_1_2:128015174-128051559:-|nuORF', 'ENSG00000163161|ENST00000285398|ERCC3'] 114323 15558 TSCLMRHLYR True PC9_epitope_Rep1 1278.63253164654 1278.63142993586 64.667 2 -1.1517122461483216 0.3511634398233906 1.0 ['ZBED4|p.F1004Cfs*23|1|0.09|ENSG00000100426|chr22:49886671-49886680|CTTCGCCACG/-|frameshift_variant', 'ZBED4|p.S1127Kfs*14|1|0.22|ENSG00000100426|chr22:49887033-49887034|-/C|frameshift_variant', 'ZBED4|p.H1096Lfs*3|2|0.34|ENSG00000100426|chr22:49886949-49886951|ACA/T|frameshift_variant', 'ENSG00000100426|ENST00000216268|ZBED4'] 22118 6243 ESWMATRVPA True NCI_RA007_Epitope_Rep2 1146.54917886206 1146.5480899358602 28.889 2 -1.1518094071836937 0.35119704639744226 1.0 ['TECPR2|p.G805Afs*95|1|0.19|ENSG00000196663|chr14:102438039-102438039|G/-|frameshift_variant'] 28132 22558 FRKGGGAC True PC9_epitope_Rep1 794.3857423654198 794.38464993586 91.574 2 -1.151892791549137 0.3512090533099896 1.0 ['ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33'] 22353 3388 ETELREQEVSE True NCI_RA007_Epitope_Rep2 1347.6154034152298 1347.61430993586 17.837 2 -1.1518943965361428 0.3512090533099896 1.0 ['ENSG00000117000|ENST00000372771|RLF'] 23332 8325 EVTEFYVQNEN True H1975_Epitope_Rep3 1370.5990250750995 1370.59792993586 37.006 2 -1.1519204578255735 0.3512090533099896 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'nc|ENSG00000240303|Q709F0-2|ACAD11'] 64797 21984 LRVTWLGHAT True NCI_RA007_Epitope_Rep5 1152.64037682496 1152.63874490379 91.694 3 -1.1520120732157433 0.3512426575999391 1.0 ['ENSG00000161048|ENST00000465647|NAPEPLD'] 108076 4284 TDLGLTLTTLP True H1975_Epitope_Rep3 1143.6387050591102 1143.6370649037901 21.594 3 -1.1520660079078289 0.3512508880543997 1.0 ['ENSG00000167360|ENST00000300778|OR51Q1'] 106079 24143 SVLYFIIFTS True PC9_epitope_Rep3 1188.64306216356 1188.64141490379 98.149 3 -1.1521190361958882 0.3512591183000317 1.0 ['chrX:133536293-133572316|126|33.06|0.4|6.38|-|2|TE_info:L1MB8,L1MB8_dup9573,L1,LINE,donor,+,133572316,133573782|GPC3,None|24'] 111017 18932 TLDKMIRNPA True PC9_epitope_Rep5 1157.6226781554901 1157.6215899358601 77.845 2 -1.1521508281976158 0.351275578164842 1.0 ['ENSG00000154928|ENST00000398015|EPHB1', 'nc|ENSG00000154928|P54762-5|EPHB1'] 41368 16072 IANYLVWRMVY True PC9_epitope_Rep3 1426.7431276413402 1426.74202993586 66.971 2 -1.152166600855701 0.351275578164842 1.0 ['ENSG00000102174|ENST00000379374|PHEX'] 131280 4257 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 21.488 2 -1.152186428615809 0.35127866856099044 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 12262 13420 DIRSFFVPQP True H1975_Epitope_Rep3 1204.6240580544797 1204.62296993586 56.89 2 -1.1521911855015181 0.35127866856099044 1.0 ['ENST00000403017.2_1_2:135957914-136028945:-|nuORF', 'nc|ENSG00000121988|Q5FWF4-3|ZRANB3', 'ENSG00000121988|ENST00000264159|ZRANB3'] 128964 13695 VSVPWLLPTFY True NCI_RA007_Epitope_Rep1 1320.71181042972 1320.7107099358602 57.284 2 -1.1522289983838332 0.35127866856099044 1.0 ['chr3:155890757-155893518|357|10.07|0.39|4.69|+|1|TE_info:Tigger6a,Tigger6a_dup153,TcMar-Tigger,DNA,donor,-,155890302,155890757|None,GMPS|9'] 71172 25591 MFFRVVGK True PC9_epitope_Rep2 982.5422430068198 982.54114993586 104.12 2 -1.152312323951531 0.35127866856099044 1.0 ['ENST00000502660.5_1_5:149456698-149465990:-|nuORF'] 11797 23279 DHKIETQRD True H1975_Epitope_Rep2 1140.5523496662 1140.5506949037901 96.01 3 -1.1523140769787878 0.35127866856099044 1.0 ['ENSG00000116954|ENST00000373001|RRAGC', 'ENSG00000025039|ENST00000369415|RRAGD', 'nc|ENSG00000025039|Q9NQL2-2|RRAGD'] 107900 14409 TAVDTAVYYC True PC9_epitope_Rep6 1104.47976188956 1104.4786699358601 67.321 2 -1.1523770933405815 0.35132049623259 1.0 ['nc|ENSG00000211952|A0A0C4DH34|IGHV4-28'] 58624 21449 LFFSPLSLSAF True PC9_epitope_Rep5 1227.65396120043 1227.65286993586 87.557 2 -1.1523930107231495 0.35132049623259 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 3207 12776 AGESCVWKLT True NCI_RA007_Epitope_Rep5 1092.5273807883198 1092.5262899358602 55.821 2 -1.1524392493600168 0.351328724551278 1.0 ['ENST00000264694.12_1_4:186131276-186168470:+|nuORF'] 48999 6157 KFGPWKAV True PC9_epitope_Rep5 931.5279728416698 931.52686993586 28.667 2 -1.152492307177976 0.35133626758330266 1.0 ['nc|ENSG00000151364|Q9BQ13-2|KCTD14', 'ENSG00000151364|ENST00000353172|KCTD14'] 36890 18294 GVQPTRRRQ True NCI_RA007_Epitope_Rep5 1096.62137271588 1096.62077496793 77.167 1 -1.1525031287500458 0.35133626758330266 1.0 ['ENST00000531072.1_1_11:64808545-64809015:+|nuORF'] 129931 10408 VTMIIAVCI True PC9_epitope_Rep5 961.5340463918899 961.53294993586 45.02 2 -1.1525068799038576 0.35133626758330266 1.0 ['ENST00000523831.1_1_8:101513253-101513298:+|nuORF'] 124142 24113 VKVLPIPVL True NCI_RA007_Epitope_Rep3 976.6684890657599 976.66738993586 104.41 2 -1.1525158345139208 0.35133626758330266 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'nc|ENSG00000127838|Q8N490-4|PNKD', 'nc|ENSG00000127838|Q8N490-3|PNKD'] 62088 23285 LLNGKKRRRWI True PC9_epitope_Rep6 1438.8997198254597 1438.89862993586 102.67 2 -1.1525609820985971 0.3513654063241207 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 20227 4489 ENVHFFHT True PC9_epitope_Rep3 1029.46682913709 1029.46572993586 22.362 2 -1.152563152790683 0.3513654063241207 1.0 ['nc|ENSG00000142002|Q86TI2-4|DPP9', 'nc|ENSG00000142002|Q86TI2|DPP9', 'ENSG00000142002|ENST00000262960|DPP9'] 55657 11088 LDAQLLQRTGA True H1975_Epitope_Rep1 1184.6513354314798 1184.6502299358601 47.614 2 -1.1525816347246183 0.35137363334263466 1.0 ['ENSG00000196329|ENST00000358647|GIMAP5', 'nc|ENSG00000196329|Q96F15-2|GIMAP5'] 112626 15190 TPEEPFPL True PC9_epitope_Rep2 928.4541987647199 928.45310993586 63.689 2 -1.1526524977515018 0.3513849431818182 1.0 ['nc|ENSG00000123575|Q6PEV8-2|FAM199X', 'ENSG00000123575|ENST00000493442|FAM199X'] 136299 14448 YGTSHVAI True NCI_RA007_Epitope_Rep3 846.42356734278 846.42246993586 64.139 2 -1.1527358829527077 0.3513849431818182 1.0 ['ENSG00000011376|ENST00000645846|LARS2'] 93791 7792 RTWWRWLTFWR True NCI_RA007_Epitope_Rep4 1692.8789843808795 1692.87733490379 36.655 3 -1.152782442767443 0.3513849431818182 1.0 ['nc|ENSG00000164284|Q8TAA5-2|GRPEL2'] 110871 17482 TLADTRTPVT True PC9_epitope_Rep1 1073.57168812845 1073.5705899358602 72.04 2 -1.1528209050822273 0.3513849431818182 1.0 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'ENSG00000169876|ENST00000306151|MUC17', 'MUC17|p.V2173Wfs*20|1|0.14|ENSG00000169876|chr7:101037932-101037932|G/-|frameshift_variant'] 15855 7570 EDLRKELYELW True PC9_epitope_Rep6 1492.75619442284 1492.75453490379 38.391 3 -1.1528255648577448 0.3513849431818182 1.0 ['nc|ENSG00000111906|Q7Z4H3-2|HDDC2', 'ENSG00000111906|ENST00000398153|HDDC2', 'ENST00000609477.5_1_6:125555503-125614049:-|nuORF', 'ENST00000608461.1_1_6:125598188-125614049:-|nuORF'] 34093 7802 GPADDIKP True PC9_epitope_Rep3 811.40758292547 811.40703496793 35.003 1 -1.1528377365907363 0.3513849431818182 1.0 ['nc|ENSG00000116514|Q6ZMZ0|RNF19B'] 74509 6323 NKSQYSLTR True NCI_RA007_Epitope_Rep5 1095.56727145435 1095.5661699358602 30.999 2 -1.1529343197794264 0.35139316922218417 1.0 ['ENSG00000160714|ENST00000292211|UBE2Q1', 'nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1'] 47819 20024 IYSFAITLWQM True PC9_epitope_Rep4 1371.6896950861499 1371.6885899358601 85.158 2 -1.1529624274098609 0.35139795853674 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 14767 5100 DVYLGRNK True NCI_RA007_Epitope_Rep2 963.5137793295099 963.51268993586 24.462 2 -1.1529986368537901 0.35139795853674 1.0 ['ENSG00000188991|ENST00000344941|SLC15A5'] 111186 14620 TLFFKWLYPP True PC9_epitope_Rep2 1310.7063311264599 1310.7052299358602 61.504 2 -1.152999859917251 0.35139795853674 1.0 ['ENST00000405837.5_1_11:62474765-62476674:-|nuORF'] 61837 19728 LLLATALGP True PC9_epitope_Rep6 867.5429541994699 867.5424049679301 88.542 1 -1.1530021280692107 0.35139795853674 1.0 ['ENSG00000099994|ENST00000358321|SUSD2', 'SUSD2|p.A258Efs*20|1|0.17|ENSG00000099994|chr22:24184931-24184931|C/-|frameshift_variant', 'SUSD2|p.N177Qfs*104|1|0.14|ENSG00000099994|chr22:24184223-24184224|-/C|frameshift_variant'] 126099 14699 VPDSLKEDR True PC9_epitope_Rep4 1057.54038800017 1057.53928993586 64.475 2 -1.1530039107922285 0.35139795853674 1.0 ['ENST00000496389.5_1_3:112738423-112780791:+|nuORF'] 10772 14800 CYRKYKQVRPF True NCI_RA007_Epitope_Rep3 1486.7867237888197 1486.78562993586 65.637 2 -1.1530146191723047 0.35139795853674 1.0 ['ENST00000576872.1_1_17:4872867-4875829:-|nuORF'] 29929 25704 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 106.41 3 -1.1530464841895594 0.35139795853674 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 75104 1904 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 10.536 3 -1.153096685260609 0.35139795853674 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 36969 15914 GVRKIEIKP True H1975_Epitope_Rep2 1038.6549642599398 1038.65386993586 66.415 2 -1.153118012594266 0.35139795853674 1.0 ['FAM135A|p.T656K|1|0.14|ENSG00000082269|chr6:70525051-70525051|C/A|missense_variant'] 99318 11388 SLDLRPLEV True H1975_Epitope_Rep2 1040.5866099165999 1040.58550993586 48.853 2 -1.153125704957994 0.35139795853674 1.0 ['nc|ENSG00000087085|P22303-3|ACHE', 'nc|ENSG00000087085|P22303-4|ACHE', 'ENSG00000087085|ENST00000241069|ACHE', 'nc|ENSG00000087085|P22303-2|ACHE'] 31199 6646 GDIVTGVYTG True PC9_epitope_Rep3 980.48147614172 980.48036993586 30.587 2 -1.1531482645936426 0.35139795853674 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 64927 17082 LSCHCHSC True PC9_epitope_Rep3 888.3040635404002 888.30296993586 70.857 2 -1.1531809919535836 0.35139795853674 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 120488 20351 VFVQSYYL True PC9_epitope_Rep3 1017.5171333744499 1017.51602993586 83.528 2 -1.1531959139632282 0.35139795853674 1.0 ['ENSG00000141646|ENST00000342988|SMAD4', 'SMAD4|p.D415Efs*20|1|0.15|ENSG00000141646|chr18:51067121-51067124|AGAC/-|frameshift_variant', 'ENST00000590499.1_1_18:48593389-48603623:+|nuORF'] 124656 12139 VLIHCCQV True PC9_epitope_Rep1 913.4513793970899 913.45028993586 51.554 2 -1.1532148173839376 0.35139795853674 1.0 ['nc|ENSG00000163235|P01135-2|TGFA', 'ENSG00000163235|ENST00000295400|TGFA', 'nc|ENSG00000163235|P01135-3|TGFA', 'nc|ENSG00000163235|P01135-5|TGFA', 'nc|ENSG00000163235|P01135-4|TGFA'] 115877 9780 TVPANATAP True PC9_epitope_Rep1 840.43413202648 840.43302993586 42.48 2 -1.1532313896581297 0.35139795853674 1.0 ['ENST00000343110.2_1_1:203452523-203452736:+|nuORF'] 74357 12245 NISCKASQDI True PC9_epitope_Rep5 1077.5124590001699 1077.51136993586 52.088 2 -1.1532374682780402 0.35139795853674 1.0 ['nc|ENSG00000211599|P06315|IGKV5-2'] 55884 5809 LDGAPPLP True NCI_RA007_Epitope_Rep2 778.42250471362 778.42140993586 27.214 2 -1.1532930917750355 0.35141886237415365 1.0 ['ENST00000228606.8_1_12:58158304-58160873:-|nuORF', 'ENST00000547344.5_1_12:58159078-58160873:-|nuORF'] 5840 23033 APGGTAASVA True PC9_epitope_Rep4 800.4028318982 800.4022849679301 96.818 1 -1.1534847341118282 0.35151584312830464 1.0 ['ENSG00000109705|ENST00000382438|NKX3-2'] 5664 17175 APALEVLPEQ True PC9_epitope_Rep4 1065.57062549929 1065.5695299358601 74.069 2 -1.1535677757168248 0.3515322877176077 1.0 ['ENST00000269886.7_1_19:4361371-4361503:-|nuORF'] 129846 20610 VTLIRHHR True NCI_RA007_Epitope_Rep2 1030.61483078346 1030.6137299358602 85.245 2 -1.1535798742292616 0.3515322877176077 1.0 ['ZNF169|p.Q421H|1|0.62|ENSG00000175787|chr9:94300821-94300821|G/T|missense_variant'] 40780 22355 HVFHRRRPP True PC9_epitope_Rep4 1200.6740769950798 1200.67296993586 94.224 2 -1.153602748715733 0.3515360525414918 1.0 ['ENSG00000134569|ENST00000378623|LRP4'] 133407 6255 WFSWRYQLREF True NCI_RA007_Epitope_Rep2 1616.7888319637998 1616.78719490379 28.935 3 -1.1536089957068736 0.3515360525414918 1.0 ['ENSG00000105131|ENST00000221730|EPHX3'] 61780 20315 LLKKKSSESTT True H1975_Epitope_Rep2 1220.6976169175598 1220.6965099358601 84.186 2 -1.1536552144316208 0.35156963180849987 1.0 ['ENSG00000171487|ENST00000390649|NLRP5', 'NLRP5|p.R518Pfs*11|1|0.24|ENSG00000171487|chr19:56027786-56027786|G/-|frameshift_variant', 'NLRP5|p.F494Sfs*35|1|0.39|ENSG00000171487|chr19:56027708-56027708|C/-|frameshift_variant'] 22601 6315 ETPQTVPA True PC9_epitope_Rep5 841.4181476091699 841.41704993586 29.265 2 -1.153669717319675 0.35157785300419664 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 32681 23242 GHPGPGPGPT True H1975_Epitope_Rep2 872.4140652882401 872.41296993586 95.868 2 -1.1538505569236421 0.3516360916363452 1.0 ['nc|ENSG00000176842|P78411-3|IRX5', 'ENST00000558597.1_2_16:54966274-54967782:+|nuORF', 'nc|ENSG00000176842|P78411-2|IRX5', 'ENSG00000176842|ENST00000394636|IRX5'] 41529 14044 IDAVTRLLEEK True H1975_Epitope_Rep1 1285.7241660185698 1285.7230699358602 59.184 2 -1.153864486240706 0.3516360916363452 1.0 ['ENST00000469506.3_1_3:42201841-42226383:+|nuORF', 'TRAK1|p.E346Gfs*34|1|0.12|ENSG00000182606|chr3:42194862-42194863|-/G|frameshift_variant', 'ENSG00000182606|ENST00000327628|TRAK1', 'nc|ENSG00000182606|Q9UPV9-2|TRAK1', 'nc|ENSG00000182606|Q9UPV9-3|TRAK1'] 2858 18928 AEWRRRRR True NCI_RA007_Epitope_Rep5 1184.6751396242398 1184.6745749679299 79.645 1 -1.1538688414991012 0.3516360916363452 1.0 ['ENST00000554273.1_1_14:50998776-50999365:-|nuORF'] 101243 12051 SLWGPYKDI True PC9_epitope_Rep5 1077.54949613189 1077.54838993586 51.348 2 -1.1538690559772395 0.3516360916363452 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 104693 7462 STARMTPPP True H1975_Epitope_Rep2 956.47495129264 956.47384993586 33.65 2 -1.153897220458184 0.3516480730223124 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 32403 24564 GGGGGGGD True H1975_Epitope_Rep1 532.1877537515201 532.18720496793 101.79 1 -1.153918524639607 0.3516480730223124 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'ENSG00000120093|ENST00000498678|HOXB3', 'TRA2A|p.G231D|1|0.26|ENSG00000164548|chr7:23506216-23506216|C/T|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'nc|ENSG00000120093|P14651-2|HOXB3', 'ENSG00000206418|ENST00000649141|RAB12', 'ENST00000470900.1_1_3:51422898-51423054:+|nuORF', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ENSG00000198455|ENST00000374888|ZXDB'] 67306 8101 LTDPKEDPIY True H1975_Epitope_Rep1 1189.5866694862498 1189.5855699358601 36.106 2 -1.15394079261428 0.3516480730223124 1.0 ['nc|ENSG00000115325|Q99704-3|DOK1', 'ENSG00000115325|ENST00000233668|DOK1'] 92591 6350 RRDRENKRSKN True NCI_RA007_Epitope_Rep1 1457.7923542044498 1457.7907049037901 28.726 3 -1.1540127038896346 0.3516689697138728 1.0 ['ENST00000605822.5_1_12:51777293-51785401:-|nuORF'] 36045 14643 GVDVAQGLEP True PC9_epitope_Rep1 983.4923751785899 983.49126993586 61.147 2 -1.1540259444231455 0.3516898658756117 1.0 ['nc|ENSG00000075702|O43379|WDR62', 'ENSG00000075702|ENST00000401500|WDR62', 'nc|ENSG00000075702|O43379-3|WDR62', 'ENST00000378860.8_1_19:36545867-36564559:+|nuORF', 'nc|ENSG00000075702|O43379-2|WDR62', 'ENST00000589953.1_1_19:36562547-36565998:+|nuORF'] 44656 19844 IPLIERLQRN True H1975_Epitope_Rep3 1250.7459045226599 1250.74426490379 83.083 3 -1.1540812133763139 0.35169362608387 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 122432 8948 VGSKRDHLL True PC9_epitope_Rep5 1023.58252759567 1023.58142993586 39.361 2 -1.1540821820543166 0.35169362608387 1.0 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'ENST00000480342.5_1_1:8525723-8716473:-|nuORF', 'RERE|p.D360Gfs*12|1|0.28|ENSG00000142599|chr1:8495088-8495089|-/C|frameshift_variant'] 91023 25888 RLKQKIKVLKK True NCI_RA007_Epitope_Rep5 1380.9656741269598 1380.96403490379 107.13 3 -1.1541274593985322 0.35172273914256014 1.0 ['ENST00000481507.5_1_9:37326993-37357262:+|nuORF', 'ENSG00000147905|ENST00000336755|ZCCHC7'] 47148 15429 IWNTFFHERYL True PC9_epitope_Rep1 1524.7513838259201 1524.74917987172 64.166 4 -1.1541351591781315 0.35172273914256014 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 45056 16477 IQPKLSLTL True PC9_epitope_Rep3 1011.63283183303 1011.63172993586 68.516 2 -1.1541434539297177 0.3517264983267417 1.0 ['nc|ENSG00000153814|Q86VZ6-3|JAZF1', 'ENSG00000153814|ENST00000283928|JAZF1'] 47986 6170 KAGLCWWSL True PC9_epitope_Rep3 1062.53207224594 1062.5309699358602 28.776 2 -1.1541725263997673 0.3517264983267417 1.0 ['ENST00000454738.5_1_7:6456256-6487444:-|nuORF'] 46440 10542 ITLPGVKNR True NCI_RA007_Epitope_Rep2 996.60801406752 996.60690993586 45.603 2 -1.154211517074156 0.35173025732031943 1.0 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 79545 23691 PGSIRKPPN True PC9_epitope_Rep1 964.54541381096 964.54430993586 95.921 2 -1.1542323185393513 0.35173025732031943 1.0 ['ENSG00000132478|ENST00000589666|UNK'] 79899 4909 PIMLDEVQCTG True PC9_epitope_Rep3 1204.5467959035598 1204.54568993586 23.979 2 -1.1542489742247357 0.351750449970847 1.0 ['ENSG00000108679|ENST00000262776|LGALS3BP'] 48681 3027 KELQRQQWEEE True NCI_RA007_Epitope_Rep1 1501.7161205160103 1501.71393987172 15.649 4 -1.154249339928598 0.351750449970847 1.0 ['ENSG00000154781|ENST00000383794|CCDC174', 'ENST00000465759.1_1_3:14693292-14708492:+|nuORF'] 20959 16025 EQYPRDWHLWY True H1975_Epitope_Rep1 1591.72081197363 1591.71970993586 66.975 2 -1.1542823883466102 0.351750449970847 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 59236 10271 LGGLILSHRL True NCI_RA007_Epitope_Rep1 1077.6658632968101 1077.66476993586 43.963 2 -1.1542854250102554 0.351750449970847 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF', 'TANK-SLC38A6|1|fusion', 'nc|ENSG00000139974|Q8IZM9-2|SLC38A6'] 39112 19094 HLDEAIHVL True PC9_epitope_Rep3 1045.5556441414901 1045.5545499358602 78.668 2 -1.1543220261277456 0.35175280727991687 1.0 ['nc|ENSG00000071564|P15923-3|TCF3', 'nc|ENSG00000071564|P15923-2|TCF3', 'ENSG00000071564|ENST00000262965|TCF3'] 120064 8596 VFFLQFLDWWY True H1975_Epitope_Rep1 1562.7598232512998 1562.7587299358602 37.993 2 -1.154332246843279 0.35175280727991687 1.0 ['PEX12|p.I341Sfs*11|1|0.21|ENSG00000108733|chr17:35575842-35575842|G/-|frameshift_variant', 'ENSG00000108733|ENST00000225873|PEX12'] 8953 6818 AVGSGRSDLL True NCI_RA007_Epitope_Rep5 973.51925863277 973.51816993586 32.911 2 -1.1543689244910487 0.35175280727991687 1.0 ['ENST00000571595.5_1_17:1617240-1619595:-|nuORF'] 100577 8600 SLQDRYVP True PC9_epitope_Rep6 976.4977949122 976.49668993586 42.888 2 -1.1543973860995906 0.35175280727991687 1.0 ['nc|ENSG00000082269|Q9P2D6-3|FAM135A', 'nc|ENSG00000082269|Q9P2D6-2|FAM135A', 'nc|ENSG00000082269|Q9P2D6-4|FAM135A', 'ENSG00000082269|ENST00000418814|FAM135A'] 88760 11579 RDGDRLWYENP True PC9_epitope_Rep3 1419.6531263366296 1419.6520299358601 49.553 2 -1.1544380820204516 0.35175280727991687 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 57825 8455 LEPQWYRVLEK True PC9_epitope_Rep4 1459.7823496010299 1459.78069490379 39.985 3 -1.154441941259172 0.35175280727991687 1.0 ['ENSG00000203747|ENST00000443193|FCGR3A', 'ENST00000476031.1_1_1:161515507-161519517:-|nuORF'] 111270 15000 TLGTLQPPD True PC9_epitope_Rep2 940.48656152216 940.48601496793 62.953 1 -1.1544579026514432 0.35175280727991687 1.0 ['ENST00000215906.5_1_22:26839610-26839709:+|nuORF'] 114534 23286 TSHGLRRHPS True PC9_epitope_Rep3 1146.6006372713 1146.59899490379 94.849 3 -1.1544794633752091 0.35175280727991687 1.0 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 128988 9747 VSVYTNLIVR True NCI_RA007_Epitope_Rep2 1162.6710082468999 1162.66990993586 42.534 2 -1.154589963449643 0.35178191219710025 1.0 ['ENSG00000117971|ENST00000261751|CHRNB4'] 120483 18701 VFVMTILII True NCI_RA007_Epitope_Rep5 1047.6402257125899 1047.6391299358602 78.753 2 -1.1546174552089135 0.35178191219710025 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 74478 23436 NKKKKEKE True PC9_epitope_Rep4 1030.6134933707797 1030.6123899358602 98.435 2 -1.1546289177812186 0.3517866193613786 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 97376 16173 SGCACGCGCE True NCI_RA007_Epitope_Rep1 888.2234302612 888.22232993586 67.018 2 -1.1546428648214742 0.3517866193613786 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 76992 9252 NVSVEIMVPNS True NCI_RA007_Epitope_Rep2 1187.58562394043 1187.58452993586 40.597 2 -1.1546766497417924 0.3517866193613786 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 101439 436 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 2.4476 2 -1.154689682609888 0.3517866193613786 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 22854 14292 EVELKFPAP True H1975_Epitope_Rep1 1028.5542471591598 1028.5531499358601 60.16 2 -1.1547131857345105 0.3517866193613786 1.0 ['ENSG00000025796|ENST00000369002|SEC63'] 131278 4070 VVQLLLKPVL True PC9_epitope_Rep3 1120.7583666993198 1120.7572699358602 20.775 2 -1.1547698209747876 0.3517866193613786 1.0 ['ENST00000396355.5_1_16:15818059-15818287:+|nuORF'] 49450 21383 KIRLPEREKP True H1975_Epitope_Rep2 1264.7615545867998 1264.7604499358602 88.475 2 -1.154770698655519 0.3517866193613786 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 116555 19285 TYFHRKSQEDF True PC9_epitope_Rep3 1456.6735274280397 1456.67242993586 79.402 2 -1.1547950996003218 0.3517866193613786 1.0 ['ENSG00000143476|ENST00000366991|DTL'] 86574 6511 QRCRRNLV True PC9_epitope_Rep4 1043.57706537575 1043.57596993586 32.166 2 -1.1548086899026933 0.3517866193613786 1.0 ['SAMD9|p.E1330Q|2|0.05|ENSG00000205413|chr7:93102110-93102110|C/G|missense_variant'] 22626 12485 ETQMHLLEC True PC9_epitope_Rep4 1102.47871634374 1102.47760993586 55.83 2 -1.1548270258823048 0.3517866193613786 1.0 ['ENSG00000101890|ENST00000218006|GUCY2F'] 44313 16070 ILYRRYRESR True PC9_epitope_Rep3 1410.7844152896998 1410.7827749037901 66.963 3 -1.1548280192484117 0.3517866193613786 1.0 ['ENST00000486986.6_1_1:151752280-151755498:-|nuORF', 'nc|ENSG00000182134|Q9Y2W6-3|TDRKH', 'ENSG00000182134|ENST00000368824|TDRKH', 'ENST00000463553.1_1_1:151755369-151755498:-|nuORF'] 138532 14436 YRLLTAGT True PC9_epitope_Rep4 893.49706663621 893.49596993586 63.436 2 -1.1549038814043215 0.3517866193613786 1.0 ['ENSG00000225830|ENST00000355832|ERCC6'] 69195 8661 LVMIAILHF True H1975_Epitope_Rep1 1055.6201589743498 1055.6190699358601 38.243 2 -1.1549218036195599 0.3517866193613786 1.0 ['ENSG00000237110|ENST00000434551|TAAR9'] 30392 24078 GAEYRFRV True PC9_epitope_Rep3 996.5141136826799 996.5130099358599 97.902 2 -1.1549860712376974 0.3517866193613786 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 3457 23084 AGLKRHTAQL True PC9_epitope_Rep1 1093.63562579769 1093.6345299358602 93.594 2 -1.1549952397355936 0.3517866193613786 1.0 ['BIRC6|p.A4796G|1|0.59|ENSG00000115760|chr2:32611575-32611575|C/G|missense_variant'] 115437 7873 TVFFHPPM True PC9_epitope_Rep1 974.4684093602199 974.46730993586 35.109 2 -1.155004889470932 0.3517866193613786 1.0 ['nc|ENSG00000113492|Q9BYV1-2|AGXT2', 'ENSG00000113492|ENST00000231420|AGXT2'] 66704 18415 LSTKFKYRYE True PC9_epitope_Rep2 1333.7030366511697 1333.70192993586 76.164 2 -1.1550723052356082 0.351794832807491 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'RAG1|p.G933E|1|0.24|ENSG00000166349|chr11:36576102-36576102|G/A|missense_variant'] 54935 18314 LAGVKELF True PC9_epitope_Rep5 875.5116540711899 875.51054993586 75.46 2 -1.1550889467384688 0.3518030460454626 1.0 ['MKI67|p.L2197V|1|0.18|ENSG00000148773|chr10:128105251-128105251|A/C|missense_variant'] 36880 6671 GVQKWEETW True PC9_epitope_Rep4 1161.5454733806098 1161.54382490379 32.834 3 -1.1551264528807346 0.35181501425403866 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1'] 137258 19062 YLGGFAFLPF True PC9_epitope_Rep1 1130.5800679841798 1130.5789699358602 78.112 2 -1.1551277225138015 0.35181501425403866 1.0 ['ENSG00000205155|ENST00000587708|PSENEN'] 62689 21630 LLWPLPFP True PC9_epitope_Rep5 981.5687750244899 981.56766993586 88.242 2 -1.1551355429537016 0.35181501425403866 1.0 ['ENST00000334370.8_1_19:42840288-42840357:+|nuORF'] 22074 6256 ESSLEMDDERC True H1975_Epitope_Rep2 1312.49113150224 1312.49002993586 29.018 2 -1.1551747083095536 0.3518232268200593 1.0 ['ENST00000518638.1_1_10:61566663-61572468:-|nuORF'] 133341 20798 WEWLAWWRRP True PC9_epitope_Rep2 1484.7465732289998 1484.74546993586 85.441 2 -1.1552873331613294 0.35182557579750173 1.0 ['ENST00000465124.1_1_9:127634977-127635226:+|nuORF'] 98140 19047 SICLVRNE True PC9_epitope_Rep2 932.4749512926401 932.47384993586 78.629 2 -1.1552918951166968 0.35182557579750173 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 127991 15346 VRQGLTQLS True NCI_RA007_Epitope_Rep4 1000.56654317836 1000.56544993586 66.694 2 -1.1553056901607095 0.35182557579750173 1.0 ['nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'ENST00000482654.1_1_X:153040393-153040779:+|nuORF'] 38404 8562 HGLGHVFG True NCI_RA007_Epitope_Rep1 822.41367136542 822.41256993586 37.306 2 -1.1553137740111517 0.35182557579750173 1.0 ['ENSG00000213199|ENST00000349064|ASIC3', 'nc|ENSG00000213199|Q9UHC3-2|ASIC3', 'nc|ENSG00000213199|Q9UHC3-3|ASIC3', 'nc|ENSG00000213199|Q9UHC3-4|ASIC3'] 46694 23814 ITWQRQRKVRP True PC9_epitope_Rep1 1466.8582489363 1466.8571499358602 96.397 2 -1.1553311300336497 0.35182557579750173 1.0 ['ENST00000492556.5_1_22:51018168-51020414:-|nuORF', 'ENST00000468532.5_1_22:51018168-51020803:-|nuORF'] 15087 11197 EACMLVFQP True H1975_Epitope_Rep1 1036.4721744113199 1036.4710699358602 48.038 2 -1.1553316891383951 0.35182557579750173 1.0 ['ENSG00000102699|ENST00000381989|PARP4'] 134635 16086 WWGGGSAP True NCI_RA007_Epitope_Rep5 816.3554877829599 816.35438993586 68.604 2 -1.1553410144575094 0.35182557579750173 1.0 ['ENST00000409185.5_1_2:131808281-131808602:-|nuORF'] 133187 14439 WDVVEWSD True NCI_RA007_Epitope_Rep5 1034.4345259492998 1034.4334299358602 62.22 2 -1.1553412781586 0.35182557579750173 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 110754 10745 TKKKKKKKKG True PC9_epitope_Rep1 1200.8394109846797 1200.83776490379 46.217 3 -1.1553595850202443 0.3518293300901997 1.0 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-2|PCDHA1', 'ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'ENSG00000255408|ENST00000522353|PCDHA3', 'ENSG00000204969|ENST00000526136|PCDHA2', 'ENSG00000249158|ENST00000398640|PCDHA11', 'ENSG00000204965|ENST00000529859|PCDHA5', 'ENSG00000204967|ENST00000530339|PCDHA4', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'ENSG00000081842|ENST00000529310|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000250120|Q9Y5I2-2|PCDHA10', 'ENSG00000250120|ENST00000307360|PCDHA10', 'ENSG00000248383|ENST00000253807|PCDHAC1', 'ENSG00000251664|ENST00000398631|PCDHA12'] 139076 24994 YSLKTKEIRK True H1975_Epitope_Rep2 1264.7503211967598 1264.74922993586 102.71 2 -1.155361562036425 0.3518293300901997 1.0 ['OR51I1|p.V296L|1|0.2|ENSG00000167359|chr11:5440629-5440629|C/A|missense_variant'] 60386 24863 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 108.14 3 -1.1555513210748665 0.35192621964351317 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 34250 22468 GPKKTKRE True PC9_epitope_Rep6 942.5610638750999 942.55996993586 99.417 2 -1.1556262534825428 0.351953184374525 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 60385 24759 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 107.61 3 -1.1556622433767065 0.351953184374525 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 67310 15379 LTDPQIHSV True PC9_epitope_Rep6 1008.52400966004 1008.52290993586 71.301 2 -1.1556978411766214 0.351953184374525 1.0 ['ENSG00000073331|ENST00000650871|ALPK1', 'ENST00000504745.1_1_4:113347516-113362363:+|nuORF', 'nc|ENSG00000073331|Q96QP1-2|ALPK1'] 121548 10166 VGKQELSI True NCI_RA007_Epitope_Rep4 872.4967322830398 872.49562993586 45.962 2 -1.1557311154598777 0.351953184374525 1.0 ['ENSG00000141434|ENST00000269202|MEP1B'] 60384 24681 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 107.23 3 -1.1557417725742511 0.351953184374525 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 110514 9752 TIQNGGGD True NCI_RA007_Epitope_Rep4 760.3351462611998 760.33404993586 44.359 2 -1.1557829114248246 0.351953184374525 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 121490 14840 VGKEPHPQDTL True PC9_epitope_Rep6 1219.6197009500297 1219.6186099358601 69.055 2 -1.155783819635352 0.351953184374525 1.0 ['ENST00000514990.1_1_3:129288623-129290035:-|nuORF'] 126882 20649 VPTQPLLKAHP True PC9_epitope_Rep2 1199.70264272835 1199.7015499358602 84.863 2 -1.1557953914459236 0.351953184374525 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'nc|ENSG00000166349|P15918-2|RAG1'] 56032 5809 LDKLEDYQQ True NCI_RA007_Epitope_Rep4 1150.5506183307 1150.5495299358602 28.969 2 -1.1557974001898341 0.351953184374525 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 63149 22847 LNRKLAVGSHP True PC9_epitope_Rep6 1190.68838964654 1190.6867549037902 100.98 3 -1.1558196778681191 0.351953184374525 1.0 ['PDZD8|p.K1070Nfs*8|1|0.1|ENSG00000165650|chr10:117283523-117283523|T/-|frameshift_variant', 'ENSG00000165650|ENST00000334464|PDZD8'] 24291 6754 FAAQAQLLADR True NCI_RA007_Epitope_Rep3 1202.64077074778 1202.6396699358602 33.657 2 -1.155891950308612 0.351953184374525 1.0 5399 18423 ALVPDELLK True NCI_RA007_Epitope_Rep1 996.5855472874399 996.58444993586 75.798 2 -1.1559652563032246 0.35196068497314825 1.0 ['nc|ENSG00000086015|Q6P0Q8-2|MAST2', 'ENSG00000086015|ENST00000361297|MAST2'] 45623 9147 ISHFSQDDL True PC9_epitope_Rep3 1060.48253877088 1060.4814499358602 40.124 2 -1.1560272857148983 0.35196068497314825 1.0 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant', 'ENST00000468245.2_1_6:101296020-101315873:-|nuORF', 'nc|ENSG00000112249|Q8N3C0-4|ASCC3'] 30734 16521 GANKALITPSL True PC9_epitope_Rep4 1083.62880908175 1083.6277099358601 71.521 2 -1.1560562249655322 0.35196068497314825 1.0 ['ENST00000457458.6_1_X:47088276-47088456:+|nuORF'] 22812 10470 EVDYKFMKPTQ True H1975_Epitope_Rep3 1384.6696879175597 1384.6685899358602 45.336 2 -1.1560742412810814 0.35196068497314825 1.0 ['ENST00000457388.1_1_10:37626656-37627235:+|nuORF'] 16580 13419 EERDHWQQFYF True NCI_RA007_Epitope_Rep1 1583.67934108447 1583.67824993586 56.201 2 -1.1560814524183523 0.3519688928856408 1.0 ['ENST00000471501.1_1_1:11709834-11710766:-|nuORF', 'ENST00000466919.1_1_1:11710000-11714093:-|nuORF', 'ENSG00000116661|ENST00000354287|FBXO2'] 54555 13142 LAARITNII True PC9_epitope_Rep4 983.61276509479 983.61166993586 58.445 2 -1.156219763333418 0.3519771005902171 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant'] 15067 8337 EAARVQIPP True H1975_Epitope_Rep2 979.5450794577898 979.5439899358599 37.02 2 -1.1562628764893677 0.35198389078152503 1.0 ['ENSG00000143850|ENST00000272203|PLEKHA6'] 23267 12137 EVRMLFKVSMK True NCI_RA007_Epitope_Rep2 1366.7464987696196 1366.7454099358602 51.804 2 -1.1562972085707912 0.35198389078152503 1.0 ['ENST00000504091.1_1_5:148427397-148431726:-|nuORF'] 83900 8191 QEIQQRQNEA True H1975_Epitope_Rep1 1242.59527710734 1242.5941899358602 36.447 2 -1.1563004036259967 0.35198389078152503 1.0 ['ENSG00000120051|ENST00000369704|CFAP58'] 51946 23447 KKVKIHYQKKK True NCI_RA007_Epitope_Rep4 1426.9136385540999 1426.9125499358602 101.76 2 -1.1563548750410066 0.35198389078152503 1.0 ['ENST00000446606.1_1_9:134116917-134117070:+|nuORF'] 75106 12673 NMRAKGTP True PC9_epitope_Rep3 873.4490708979699 873.44796993586 53.771 2 -1.156443163743536 0.35198389078152503 1.0 ['ENSG00000185518|ENST00000394232|SV2B', 'nc|ENSG00000185518|Q7L1I2-2|SV2B'] 64836 7069 LSAKAAQA True PC9_epitope_Rep1 758.4286527232199 758.42754993586 31.998 2 -1.1564983300351026 0.35198389078152503 1.0 ['nc|ENSG00000177156|P37837-2|TALDO1', 'ENSG00000177156|ENST00000319006|TALDO1'] 10297 3781 CHCRVWRPVF True H1975_Epitope_Rep1 1301.62738669645 1301.62573490379 19.122 3 -1.1565241369000414 0.35198389078152503 1.0 ['ENST00000526600.1_1_11:12961545-12961695:+|nuORF'] 125680 7141 VMVHFDLPQQE True H1975_Epitope_Rep3 1341.63872214245 1341.63762993586 32.441 2 -1.1565432483806373 0.35200476178414936 1.0 ['nc|ENSG00000160072|Q5T9A4-3|ATAD3B', 'ENST00000472194.6_1_1:1413873-1431194:+|nuORF', 'ENSG00000160072|ENST00000673477|ATAD3B', 'ENST00000474481.1_1_1:1425595-1425805:+|nuORF'] 11155 22528 DEGHCGRR True NCI_RA007_Epitope_Rep2 928.3933469269999 928.39224993586 93.691 2 -1.156563279097831 0.3520256322581462 1.0 ['ENST00000503552.1_1_1:17316691-17319005:-|nuORF', 'ENST00000326735.12_1_1:17316691-17319005:-|nuORF'] 28593 8087 FSPFCLQE True NCI_RA007_Epitope_Rep1 969.42660411789 969.42550993586 35.454 2 -1.156578502154188 0.35203383820475154 1.0 ['ENST00000341567.8_1_7:66420943-66421105:+|nuORF'] 104531 7648 SSRWVPVNHLG True PC9_epitope_Rep5 1250.6520041378199 1250.65036490379 34.364 3 -1.1566328341991878 0.3520547077819287 1.0 ['FAT2|p.A817Qfs*33|1|0.4|ENSG00000086570|chr5:151566483-151566484|-/GTTG|frameshift_variant'] 14574 10605 DVFLMLKK True NCI_RA007_Epitope_Rep2 992.5728744287599 992.57176993586 45.85 2 -1.1566895254942753 0.3520584547975737 1.0 ['KIF2A|p.L455Ifs*30|1|0.58|ENSG00000068796|chr5:62363794-62363800|TCTCATT/-|frameshift_variant', 'nc|ENSG00000068796|O00139-5|KIF2A', 'nc|ENSG00000068796|O00139|KIF2A', 'ENSG00000068796|ENST00000407818|KIF2A', 'nc|ENSG00000068796|O00139-2|KIF2A', 'nc|ENSG00000068796|O00139-1|KIF2A'] 106520 11629 SVVRESKSF True PC9_epitope_Rep5 1037.5505587610498 1037.54946993586 49.726 2 -1.156704053362811 0.3520584547975737 1.0 ['ENSG00000197405|ENST00000355085|C5AR1'] 56835 11195 LEDDGEFYM True PC9_epitope_Rep5 1117.42739196353 1117.42628993586 48.049 2 -1.156736396125376 0.3520666599128761 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1'] 112024 6916 TLSTKANP True PC9_epitope_Rep2 830.4497820906199 830.44868993586 32.004 2 -1.156773960406231 0.35207272911443693 1.0 ['ENST00000477724.6_2_14:105954580-105958516:+|nuORF'] 32626 3365 GHFHGPWC True PC9_epitope_Rep3 939.3809913381499 939.37988993586 18.055 2 -1.156792581991972 0.35207272911443693 1.0 ['ENST00000436518.5_1_22:20117014-20127004:+|nuORF', 'ENST00000334554.11_1_22:20119331-20127004:+|nuORF'] 118585 5968 VEAEKPWWQVF True H1975_Epitope_Rep1 1417.7030366511701 1417.70140490379 28.027 3 -1.156802494024056 0.35207272911443693 1.0 ['ENSG00000262919|ENST00000576892|CCNQ', 'ENST00000428076.1_1_13:19956755-19957193:+|nuORF'] 79604 6725 PGWPGPGR True PC9_epitope_Rep5 822.4136713654199 822.41256993586 30.838 2 -1.1568309235210679 0.35207272911443693 1.0 ['ENST00000560958.1_1_15:83395247-83395832:-|nuORF'] 120564 4832 VGADSFRRV True NCI_RA007_Epitope_Rep5 1005.5355774032499 1005.53448993586 25.276 2 -1.1568343660719014 0.35207272911443693 1.0 ['ENST00000585558.5_1_17:68101078-68101171:+|nuORF'] 41706 9752 IDLQTLAEW True NCI_RA007_Epitope_Rep3 1087.5549754351498 1087.5538699358601 45.427 2 -1.156865127711801 0.35207272911443693 1.0 ['ENSG00000075539|ENST00000358350|FRYL', 'FRYL|p.S761G|1|0.1|ENSG00000075539|chr4:48579220-48579220|T/C|missense_variant'] 87979 7959 QVRDWSHYFKI True PC9_epitope_Rep2 1477.7466327986497 1477.74499490379 35.978 3 -1.1568784220437245 0.35207272911443693 1.0 ['ENSG00000111057|ENST00000388835|KRT18', 'ENST00000549078.5_1_12:53342924-53344195:+|nuORF'] 123036 14704 VGYIRENIW True NCI_RA007_Epitope_Rep5 1148.59784330664 1148.59674993586 63.229 2 -1.1568823377243358 0.35207272911443693 1.0 ['ENSG00000145703|ENST00000274364|IQGAP2'] 101438 293 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 1.6616 2 -1.156887614775411 0.35207272911443693 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 97348 20321 SFWMYLGR True NCI_RA007_Epitope_Rep2 1058.5007721176598 1058.50017496793 84.075 1 -1.1569467176675905 0.35207272911443693 1.0 ['ENST00000421767.1_1_7:65844813-65844939:-|nuORF'] 11193 24036 DEKLEKFWIDF True PC9_epitope_Rep1 1468.7238316654 1468.7227299358601 97.265 2 -1.1571855184274633 0.352101085043617 1.0 ['ENST00000480294.1_1_6:10891760-10930631:+|nuORF', 'ENSG00000153157|ENST00000283141|SYCP2L'] 79238 15936 PGGGSHGG True H1975_Epitope_Rep1 624.26158739812 624.2610349679301 66.609 1 -1.1571924121143304 0.352101085043617 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 97349 11542 SFWQYLVGTP True PC9_epitope_Rep1 1196.5866099165999 1196.58496490379 49.275 3 -1.1572306165969437 0.352101085043617 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2'] 67969 10276 LTLPQNFGNIF True H1975_Epitope_Rep1 1262.66592286646 1262.66482993586 44.471 2 -1.1572745233077852 0.352101085043617 1.0 ['nc|ENSG00000113597|A5PLN9-2|TRAPPC13', 'nc|ENSG00000113597|A5PLN9-4|TRAPPC13', 'ENSG00000113597|ENST00000399438|TRAPPC13', 'nc|ENSG00000113597|A5PLN9-5|TRAPPC13', 'ENST00000508304.5_1_5:64920917-64948411:+|nuORF', 'nc|ENSG00000113597|A5PLN9-7|TRAPPC13', 'ENST00000512009.5_1_5:64920875-64956772:+|nuORF'] 98638 12092 SIPFVEMKMR True H1975_Epitope_Rep2 1236.6358856914799 1236.63478993586 51.594 2 -1.157278734265325 0.352101085043617 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'TNR|p.D691Efs*23|1|0.14|ENSG00000116147|chr1:175366117-175366119|AGG/T|frameshift_variant', 'ENSG00000116147|ENST00000367674|TNR'] 110351 5624 TILCTLMNKL True NCI_RA007_Epitope_Rep3 1148.62973768188 1148.6281049037902 29.112 3 -1.1572912488364258 0.3521092879570546 1.0 ['ENSG00000064666|ENST00000263097|CNN2', 'nc|ENSG00000064666|Q99439-2|CNN2'] 25019 15671 FDDGDCCD True PC9_epitope_Rep2 888.226583982 888.22548993586 65.555 2 -1.157407007155482 0.3521174906627841 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 78007 18037 PALLAGEK True PC9_epitope_Rep5 797.46470387877 797.4641549679301 74.395 1 -1.1574910879428524 0.3521383536322893 1.0 ['ENST00000399494.5_1_13:31037822-31039290:-|nuORF'] 90824 17799 RKTHLEKCWQL True NCI_RA007_Epitope_Rep3 1440.7659883442398 1440.76488993586 78.05 2 -1.1575204992711479 0.35214655576234066 1.0 ['chr3:193618936-193621245|202|11.52|0.28|5.37|+|1|OPA1,None|1'] 70275 5815 LYPDFLLS True NCI_RA007_Epitope_Rep4 966.50623433758 966.5051299358599 28.993 2 -1.1575502527406951 0.3521800779865296 1.0 ['ENST00000228811.8_2_12:10998545-10999891:-|nuORF'] 63421 9662 LPGLKEFW True H1975_Epitope_Rep1 988.5382031721999 988.53710993586 42.09 2 -1.1575635458287576 0.35220093937130487 1.0 ['CON__Q3SZH5'] 119298 4684 VELLQMEQVR True PC9_epitope_Rep1 1243.65945758703 1243.65781490379 22.889 3 -1.1576206109034497 0.35220914039751866 1.0 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7'] 45968 5627 ISSSNLYP True PC9_epitope_Rep3 879.43379767331 879.43270993586 26.722 2 -1.1576620525021084 0.3522426605562659 1.0 ['ENSG00000221826|ENST00000327495|PSG3', 'ENST00000597009.5_1_19:43236759-43244536:-|nuORF'] 124571 23545 VLGQLLND True H1975_Epitope_Rep2 870.4810822189 870.47998993586 97.049 2 -1.15769491328304 0.352250860846668 1.0 ['nc|ENSG00000182158|Q70SY1-2|CREB3L2', 'ENSG00000182158|ENST00000330387|CREB3L2', 'nc|ENSG00000182158|Q70SY1-3|CREB3L2'] 137944 8564 YPSYGLNYYQQ True NCI_RA007_Epitope_Rep5 1394.61428121642 1394.6131899358602 39.624 2 -1.1577583909217453 0.3522590609294494 1.0 ['CON__P02668'] 1995 16289 AEKLLEEEEK True H1975_Epitope_Rep1 1216.61869789052 1216.6176099358602 68.01 2 -1.157782460222066 0.3522799199939236 1.0 ['ENSG00000105248|ENST00000262962|YJU2'] 54559 9573 LAARQVPV True PC9_epitope_Rep5 852.5181364339599 852.51702993586 41.783 2 -1.1580211253410175 0.35233875561744415 1.0 ['ENST00000533614.5_1_1:249151936-249153183:-|nuORF', 'ENST00000496411.5_1_1:249152123-249153213:-|nuORF', 'ENST00000483791.6_1_1:249152025-249153300:-|nuORF', 'ENST00000470787.6_1_1:249150751-249153213:-|nuORF', 'ENST00000412341.6_1_1:249150017-249153213:-|nuORF'] 33096 22104 GKIRDILHDL True PC9_epitope_Rep2 1178.6771562565 1178.6760499358602 90.496 2 -1.1580666666974198 0.35234695427616586 1.0 ['ENSG00000181481|ENST00000328381|RNF135', 'nc|ENSG00000181481|Q8IUD6-3|RNF135'] 125562 11991 VLYLTPPP True PC9_epitope_Rep3 898.5164050984599 898.51530993586 51.15 2 -1.1581480574699543 0.35235515272731877 1.0 ['ENST00000064778.8_1_11:73116189-73116408:-|nuORF'] 118283 16464 VDALEGVF True NCI_RA007_Epitope_Rep2 848.4279840168799 848.42688993586 68.769 2 -1.1582397241751372 0.3523588906188686 1.0 ['ENST00000420915.1_1_X:26576018-26576444:+|nuORF'] 95302 8553 SAESIKLEREY True H1975_Epitope_Rep3 1323.66704506527 1323.66594993586 37.887 2 -1.1582527223473427 0.3523588906188686 1.0 ['ENSG00000163633|ENST00000295898|C4orf36'] 66186 12635 LSPLHPSQQLY True H1975_Epitope_Rep3 1281.6717365228901 1281.67062993586 53.805 2 -1.1583305566561488 0.3523670886075949 1.0 ['nc|ENSG00000066136|Q13952|NFYC', 'nc|ENSG00000066136|Q13952-3|NFYC', 'ENST00000496608.1_1_1:41236053-41236497:+|nuORF'] 110895 20164 TLALAPALA True PC9_epitope_Rep2 839.5116540711899 839.51110496793 82.973 1 -1.158344554761464 0.3523752863887799 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant'] 92451 14214 RQVVLPQL True PC9_epitope_Rep4 951.5865503469497 951.5860049679301 62.583 1 -1.1583632570314768 0.352379023581383 1.0 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000523654.5_1_5:71615928-71616063:-|nuORF', 'ENST00000520285.5_1_5:71590560-71616015:-|nuORF', 'ENST00000522404.5_1_5:71537397-71616033:-|nuORF'] 64503 9347 LQYPVYWDHLE True NCI_RA007_Epitope_Rep1 1461.69286589029 1461.69176993586 40.351 2 -1.1583846415695311 0.352379023581383 1.0 ['ENSG00000090487|ENST00000204566|SPG21'] 91889 25437 RPPGGGGG True H1975_Epitope_Rep3 653.32452200785 653.3239749679301 105.82 1 -1.158514947724498 0.3524080754382634 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 122992 11901 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 50.796 2 -1.1585223167264527 0.3524080754382634 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 24170 10555 EYTGGFKI True PC9_epitope_Rep6 913.4545331178899 913.45342993586 51.4 2 -1.1585664098414468 0.3524162721818596 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 44256 7885 ILTRERDPS True H1975_Epitope_Rep1 1085.58292151849 1085.58182993586 35.282 2 -1.1585851263029332 0.35244086116771506 1.0 ['ENSG00000179299|ENST00000381782|NSUN7'] 124764 5796 VLKNARIAPAA True PC9_epitope_Rep6 1122.6873270173799 1122.68569490379 30.49 3 -1.1585860022505676 0.35244086116771506 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'ENST00000541750.1_12:122618368-122620257:+|nuORF', 'nc|ENSG00000175727|Q9HAP2-4|MLXIP', 'nc|ENSG00000175727|Q9HAP2-2|MLXIP'] 62389 16455 LLRRLWWEDCW True PC9_epitope_Rep2 1574.7816384083796 1574.78054993586 68.535 2 -1.1585910600351188 0.35244086116771506 1.0 ['AluJr4_dup4313|chr3:128811130-128811275:-|1.1423359140543188|0.0007489705087858|10.57|502.0|1|1|sense'] 15668 7553 ECGCTPFCVPA True PC9_epitope_Rep3 1125.42932362317 1125.4282299358601 34.053 2 -1.1586149497519276 0.3524490570813821 1.0 ['ENSG00000117983|ENST00000529681|MUC5B'] 43956 9174 ILFFSRMSTL True NCI_RA007_Epitope_Rep2 1213.6529156546098 1213.65180993586 40.293 2 -1.158645762004272 0.3524736435776391 1.0 ['ENST00000473723.5_1_7:48034024-48035656:-|nuORF'] 139143 7140 YSQTLSLH True NCI_RA007_Epitope_Rep5 947.4712458111899 947.47014993586 34.14 2 -1.1586701770512897 0.3524736435776391 1.0 ['ENSG00000159708|ENST00000329956|LRRC36', 'nc|ENSG00000159708|Q1X8D7-3|LRRC36', 'nc|ENSG00000159708|Q1X8D7-2|LRRC36'] 110129 9195 TICNLYTMPRI True PC9_epitope_Rep1 1323.6679140957501 1323.66625490379 40.219 3 -1.1586704125189402 0.3524736435776391 1.0 ['nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1', 'FNIP1|p.K732Nfs*23|1|0.19|ENSG00000217128|chr5:131672248-131672248|T/-|frameshift_variant', 'nc|ENSG00000217128|Q8TF40-2|FNIP1'] 23331 8378 EVTEFYVQNEN True H1975_Epitope_Rep2 1370.5990250750995 1370.59792993586 37.179 2 -1.1587150009752307 0.352481838661503 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'nc|ENSG00000240303|Q709F0-2|ACAD11'] 109431 13972 TGSAKHRL True NCI_RA007_Epitope_Rep4 868.4878989348399 868.48680993586 61.016 2 -1.1587280223862042 0.3524855725422699 1.0 ['nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1', 'ENST00000523182.5_1_8:37720415-37730726:-|nuORF', 'ENSG00000156675|ENST00000330843|RAB11FIP1'] 117542 9912 VAGAFHKG True PC9_epitope_Rep1 785.4184223926899 785.41732993586 42.985 2 -1.15874712046504 0.3524855725422699 1.0 ['ATL2|p.R104H|1|0.25|ENSG00000119787|chr2:38343320-38343320|C/T|missense_variant'] 22708 8620 ETVTLDVTKM True H1975_Epitope_Rep3 1135.5794759308299 1135.57836993586 38.15 2 -1.1587726968287644 0.35248930623402264 1.0 ['ENSG00000025423|ENST00000322165|HSD17B6'] 66070 10994 LSNIRWWLEEY True NCI_RA007_Epitope_Rep1 1507.7459640923103 1507.7448699358602 46.758 2 -1.1587849738008207 0.35248930623402264 1.0 ['ENSG00000114480|ENST00000429644|GBE1', 'GBE1-ZNF385D|1|fusion'] 15831 12073 EDKNRYICK True NCI_RA007_Epitope_Rep2 1167.57064258263 1167.56954993586 51.553 2 -1.1588912787625902 0.3525086997785511 1.0 ['ENST00000543420.5_1_12:10464095-10467389:+|nuORF', 'ENST00000539374.1_1_12:10464095-10467389:+|nuORF', 'nc|ENSG00000134539|Q13241-3|KLRD1', 'ENSG00000134539|ENST00000336164|KLRD1', 'nc|ENSG00000134539|Q13241-2|KLRD1'] 80606 16095 PLPFLGTI True H1975_Epitope_Rep1 856.50584041476 856.50474993586 67.252 2 -1.1589023720131022 0.3525086997785511 1.0 ['nc|ENSG00000021461|Q9HB55-4|CYP3A43', 'nc|ENSG00000021461|Q9HB55-3|CYP3A43', 'ENSG00000021461|ENST00000354829|CYP3A43', 'nc|ENSG00000021461|Q9HB55-2|CYP3A43', 'nc|ENSG00000021461|Q9HB55-6|CYP3A43'] 133834 7762 WLWRKVWQLWR True NCI_RA007_Epitope_Rep5 1655.9201209168698 1655.91847490379 36.554 3 -1.1589039683242113 0.3525086997785511 1.0 ['PDE4DIP|p.R930Sfs*80|1|0.35|ENSG00000178104|chr1:148981371-148981371|G/-|frameshift_variant'] 38044 16307 HEKVNIIPL True PC9_epitope_Rep4 1061.62332977849 1061.62222993586 70.686 2 -1.1589150223935165 0.3525086997785511 1.0 ['ENST00000425198.1_1_7:35872473-35938044:+|nuORF', 'nc|ENSG00000122545|Q16181-2|SEPTIN7', 'ENSG00000122545|ENST00000350320|SEPTIN7', 'ENST00000398921.6_1_7:45788229-45798731:-|nuORF'] 118593 6255 VEAGHNSGGPR True NCI_RA007_Epitope_Rep2 1079.5108192073899 1079.5097299358602 28.935 2 -1.1589374589444557 0.3525086997785511 1.0 ['ENST00000513421.5_1_4:54457561-54482691:-|nuORF', 'ENST00000263925.7_1_4:54457561-54457720:-|nuORF', 'ENST00000512247.5_1_4:54457561-54457916:-|nuORF'] 78647 23531 PDYGEKKLPQA True PC9_epitope_Rep4 1244.64010204144 1244.63900993586 98.817 2 -1.1589490357999328 0.3525086997785511 1.0 ['ENSG00000182601|ENST00000331351|HS3ST4'] 37732 7455 HATLVFDVEL True PC9_epitope_Rep2 1142.5971746003 1142.59552490379 34.05 3 -1.1589559864056096 0.3525086997785511 1.0 ['ENST00000474726.5_1_20:1352758-1358098:-|nuORF', 'ENSG00000198225|ENST00000370659|FKBP1C', 'ENSG00000088832|ENST00000400137|FKBP1A', 'chr20:1370072-1371120|434|33.56|0.0|21.68|-|ENST00000677335|FKBP1A,FKBP1A'] 36967 9383 GVRISSFP True PC9_epitope_Rep5 861.4708518883699 861.46974993586 41.046 2 -1.1589668158169957 0.3525168931743983 1.0 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK'] 42088 23152 IEEILQLKLL True PC9_epitope_Rep6 1210.7536752417 1210.75256993586 102.15 2 -1.15905212613564 0.35252508636288865 1.0 ['ENST00000506902.1_1_5:60475632-60527744:+|nuORF'] 48109 26141 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 107.43 3 -1.1590668226390635 0.35253327934402995 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 137906 22672 YPPFFLLL True PC9_epitope_Rep5 1008.5684406713199 1008.56734993586 92.211 2 -1.1591241359726818 0.35253701126154624 1.0 ['ENSG00000180974|ENST00000641726|OR52E4'] 59051 8736 LGDDRELID True NCI_RA007_Epitope_Rep3 1044.50875351872 1044.5076499358602 41.453 2 -1.1591242769859846 0.35253701126154624 1.0 ['SPICE1|p.H407D|1|0.24|ENSG00000163611|chr3:113465721-113465721|G/C|missense_variant'] 92740 19328 RRKKYGIVL True PC9_epitope_Rep5 1131.72404687927 1131.72241490379 79.39 3 -1.159189318954402 0.35255785704343867 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 57880 7698 LEQFLMDIEIP True H1975_Epitope_Rep3 1346.6791899720997 1346.67808993586 34.591 2 -1.1593231641146602 0.35257424113977703 1.0 ['ENST00000326857.9_1_3:98541165-98544168:-|nuORF'] 57511 23461 LEKQDKTVRKL True PC9_epitope_Rep1 1356.8088987020399 1356.8078099358602 95.028 2 -1.1593396811815972 0.35257424113977703 1.0 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 100289 12788 SLLTLQGPV True PC9_epitope_Rep1 926.5436824754598 926.54258993586 54.064 2 -1.1594254525478012 0.3526285822736762 1.0 ['nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3', 'ENSG00000244482|ENST00000396365|LILRA6', 'ENSG00000204577|ENST00000445347|LILRB3', 'LILRA4|p.V234M|1|0.2|ENSG00000239961|chr19:54337652-54337652|C/T|missense_variant', 'ENST00000391735.3_19:54722514-54745001:-|nuORF', 'nc|ENSG00000239961|P59901-2|LILRA4', 'ENSG00000239961|ENST00000291759|LILRA4'] 99730 3979 SLGHPRPQEK True NCI_RA007_Epitope_Rep4 1147.60980497267 1147.6087099358601 21.55 2 -1.1594435165532115 0.3526285822736762 1.0 ['ENSG00000128881|ENST00000267890|TTBK2', 'nc|ENSG00000128881|Q6IQ55-2|TTBK2', 'nc|ENSG00000128881|Q6IQ55-3|TTBK2'] 46551 11356 ITQVYGFY True PC9_epitope_Rep2 989.4858332461697 989.48472993586 49.004 2 -1.1594742008199173 0.35264942557821755 1.0 ['ENSG00000104695|ENST00000221138|PPP2CB', 'ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA', 'ENSG00000149923|ENST00000279387|PPP4C', 'ENST00000566749.5_1_16:30094185-30096380:+|nuORF', 'ENST00000567040.5_1_16:30087698-30094972:+|nuORF', 'nc|ENSG00000119414|O00743-2|PPP6C', 'ENSG00000119414|ENST00000373547|PPP6C', 'nc|ENSG00000119414|O00743-3|PPP6C'] 78222 23506 PAPSRQPRRPR True PC9_epitope_Rep2 1316.75378386776 1316.7532749679299 95.89 1 -1.1595208034364295 0.35266953441295545 1.0 ['ENST00000328194.7_2_11:9286719-9286821:-|nuORF'] 41539 15632 IDCTKEEMLI True PC9_epitope_Rep5 1193.56719699497 1193.56555490379 65.139 3 -1.1595818283158346 0.35266953441295545 1.0 ['FERMT1|p.E309K|1|0.2|ENSG00000101311|chr20:6097556-6097556|C/T|missense_variant'] 92739 19212 RRKKYGIVL True PC9_epitope_Rep5 1131.72404687927 1131.72241490379 78.938 3 -1.1596182355622962 0.35266953441295545 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 86118 23932 QPQPWRWLYPR True PC9_epitope_Rep5 1525.79425169741 1525.7931499358601 97.034 2 -1.159624375694449 0.35266953441295545 1.0 ['ENST00000484749.5_1_1:228360905-228363211:+|nuORF'] 68484 20769 LTVFWMDFV True PC9_epitope_Rep6 1156.56270366788 1156.5616099358601 92.649 2 -1.1597108078654461 0.3527112168214367 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 22631 3962 ETQTQRRGWPL True NCI_RA007_Epitope_Rep1 1370.7054962626598 1370.70385490379 19.452 3 -1.1597108483406016 0.3527112168214367 1.0 ['ENST00000477976.5_1_1:880048-880436:-|nuORF'] 3075 19811 AGAFVLDPMC True H1975_Epitope_Rep3 1022.4565243471799 1022.45542993586 82.944 2 -1.1597243206938346 0.35271940589299494 1.0 ['ENSG00000138050|ENST00000505747|THUMPD2', 'ENST00000460072.5_1_2:39963877-39988481:-|nuORF'] 43789 15424 IKEDELRESIE True NCI_RA007_Epitope_Rep2 1359.68817443267 1359.68706993586 64.697 2 -1.1597865150285152 0.3527275947573503 1.0 ['nc|ENSG00000065154|P04181-2|OAT', 'ENSG00000065154|ENST00000368845|OAT'] 121580 11290 VGKVLQLL True NCI_RA007_Epitope_Rep5 868.5745886809199 868.57348993586 50.07 2 -1.1597940742930373 0.3527313210029603 1.0 ['ENST00000457622.1_1_6:46174144-46174312:+|nuORF'] 45534 10748 ISFRSFCIILP True NCI_RA007_Epitope_Rep1 1294.7107648838999 1294.7096699358601 45.8 2 -1.159903172563461 0.3527313210029603 1.0 ['ENSG00000181616|ENST00000322653|OR52H1'] 30915 13907 GASEEKLASV True PC9_epitope_Rep4 989.5029398622898 989.50184993586 61.397 2 -1.1599144302279663 0.3527350470600142 1.0 ['ENSG00000146192|ENST00000274963|FGD2', 'ENST00000487975.5_1_6:36973566-36978850:+|nuORF', 'ENST00000459781.5_1_6:36973566-36979631:+|nuORF', 'ENST00000464083.5_1_6:36973566-36981682:+|nuORF'] 122067 5866 VGRAPKQA True PC9_epitope_Rep1 825.48208527841 825.48098993586 27.38 2 -1.1599166390909095 0.3527350470600142 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 52126 19140 KLSKPVYL True PC9_epitope_Rep5 946.5851533646198 946.58404993586 78.657 2 -1.1599547006776132 0.35278118635276856 1.0 ['ENSG00000102897|ENST00000567954|LYRM1'] 36253 14839 GVGGRKPH True NCI_RA007_Epitope_Rep3 806.4511195032999 806.45057496793 65.799 1 -1.159964664271666 0.35278937381404174 1.0 ['ENST00000520083.1_1_9:36923038-36923170:-|nuORF'] 15644 7942 EAYEENEEFLR True NCI_RA007_Epitope_Rep1 1427.6204887956699 1427.61938993586 34.885 2 -1.1599792882330084 0.3527975610681712 1.0 ['TRMT112|p.G73A|1|0.2|ENSG00000173113|chr11:64317110-64317110|C/G|missense_variant'] 54762 5778 LAERDPAAP True H1975_Epitope_Rep3 938.4821448480598 938.48104993586 27.251 2 -1.160037216505428 0.3528094720064766 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 78220 7570 PAPSLTWVRCF True H1975_Epitope_Rep3 1275.64341360007 1275.64230993586 34.099 2 -1.1600379665220042 0.3528094720064766 1.0 ['MDGA2|p.S349C|1|0.2|ENSG00000139915|chr14:47097003-47097003|G/C|missense_variant'] 127565 10899 VQVSPAGPILE True H1975_Epitope_Rep3 1108.6128246644398 1108.61172993586 47.008 2 -1.160076572483452 0.3528094720064766 1.0 ['ENSG00000088827|ENST00000344754|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-2|SIGLEC1', 'nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 95920 7277 SDVVRLEK True NCI_RA007_Epitope_Rep4 944.5290950404799 944.52798993586 34.626 2 -1.1600980116877673 0.3528176585921194 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 91481 21144 RNVIQRVIR True PC9_epitope_Rep6 1152.7203584811598 1152.7192699358602 94.176 2 -1.1601309231338635 0.35283849423193686 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000484201.5_1_1:114440516-114447658:-|nuORF', 'ENST00000489499.5_1_1:114442984-114447339:-|nuORF', 'ENST00000489092.5_1_1:114445268-114447339:-|nuORF', 'nc|ENSG00000134262|Q9Y6B7-2|AP4B1'] 86878 17547 QRRIRRHKNYL True PC9_epitope_Rep4 1538.9018450837798 1538.90020490379 75.51 3 -1.1601528194464215 0.3528593293446501 1.0 ['ENSG00000159461|ENST00000290649|AMFR', 'ENST00000492830.5_1_16:56419897-56437006:-|nuORF'] 73690 8763 NGQRKNPKD True NCI_RA007_Epitope_Rep1 1055.54720471611 1055.5461099358602 38.087 2 -1.1601760705285762 0.352863051644974 1.0 ['ENSG00000163961|ENST00000318037|RNF168'] 15605 5490 EAVASDTLLS True PC9_epitope_Rep2 1004.50260550912 1004.50150993586 26.511 2 -1.1601832768022808 0.352863051644974 1.0 ['ENST00000395136.6_2_1:70687096-70687432:+|nuORF'] 18440 4590 EKHFQREEQER True H1975_Epitope_Rep3 1514.7226028787798 1514.72150993586 22.776 2 -1.1602756452718919 0.35290471914091653 1.0 ['nc|ENSG00000135525|Q14244-2|MAP7', 'nc|ENSG00000135525|Q14244-6|MAP7', 'nc|ENSG00000135525|Q14244-4|MAP7', 'ENSG00000135525|ENST00000354570|MAP7', 'nc|ENSG00000135525|Q14244-7|MAP7', 'nc|ENSG00000135525|Q14244-5|MAP7', 'nc|ENSG00000135525|Q14244-3|MAP7'] 36502 9085 GVKGAKIK True PC9_epitope_Rep3 799.5279728416699 799.52686993586 39.885 2 -1.1603004643258368 0.35290471914091653 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 78 6212 AAAKGRLN True PC9_epitope_Rep5 799.46643521427 799.46532993586 28.876 2 -1.160342342481977 0.35291290379702006 1.0 ['nc|ENSG00000100227|Q9BY77-2|POLDIP3', 'ENSG00000100227|ENST00000252115|POLDIP3', 'POLDIP3|p.R13S|1|0.24|ENSG00000100227|chr22:42614821-42614821|G/T|missense_variant'] 27544 21463 FPIVDIKV True PC9_epitope_Rep6 929.5586042636099 929.55750993586 95.432 2 -1.160470055074592 0.3529627521659394 1.0 ['ENST00000380152.7_1_13:32899218-32899257:+|nuORF'] 66378 12601 LSRASYFV True PC9_epitope_Rep5 941.4970666362099 941.49596993586 53.47 2 -1.1604875723336283 0.3529627521659394 1.0 ['ENST00000575524.1_1_17:4846390-4846588:+|nuORF'] 137531 22757 YLQRYHII True PC9_epitope_Rep1 1104.60801406752 1104.6069099358601 92.342 2 -1.160488118820412 0.3529627521659394 1.0 ['ENST00000513705.5_1_4:5205889-5347127:+|nuORF', 'nc|ENSG00000152953|Q9NY57-2|STK32B', 'ENSG00000152953|ENST00000282908|STK32B'] 34244 16655 GPKKTKRE True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 73.313 2 -1.1605505686266302 0.3529664714735604 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 49260 22046 KHAMHQTG True PC9_epitope_Rep1 908.4286698065599 908.42756993586 89.614 2 -1.160555248459647 0.3529664714735604 1.0 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000581012.6_1_17:30190380-30195078:-|nuORF'] 5292 18073 ALRRRPWNNR True NCI_RA007_Epitope_Rep2 1337.7541182209297 1337.75302993586 75.053 2 -1.1606285286267508 0.35298730206910506 1.0 ['nc|ENSG00000162746|Q6BAA4-5|FCRLB', 'nc|ENSG00000162746|Q6BAA4-4|FCRLB'] 7566 15357 ASGDTLYIAT True PC9_epitope_Rep3 1010.49204082542 1010.49147496793 64.227 1 -1.1607327143556483 0.3530207793193287 1.0 ['ENSG00000100811|ENST00000262238|YY1'] 46503 12283 ITPLTDRCYLC True NCI_RA007_Epitope_Rep1 1296.62062955016 1296.61952993586 51.748 2 -1.160777427064791 0.35302449697107663 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 136515 7337 YHMVCLDP True H1975_Epitope_Rep2 976.4146595351999 976.41356993586 33.162 2 -1.16079068222045 0.35302449697107663 1.0 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 136050 896 YFTHQLPGTVQ True H1975_Epitope_Rep3 1289.6404363946099 1289.63878490379 4.8626 3 -1.1608239908745122 0.35303267907729663 1.0 ['ZFHX4|p.P3276H|1|0.15|ENSG00000091656|chr8:76863541-76863541|C/A|missense_variant'] 80984 6433 PNLDMGYWESL True H1975_Epitope_Rep1 1323.58053855999 1323.57944993586 29.804 2 -1.1608256965489605 0.35303639628702227 1.0 ['nc|ENSG00000105298|Q8WUQ7-2|CACTIN', 'ENSG00000105298|ENST00000429344|CACTIN'] 41177 10966 HYYAIWKYLYR True PC9_epitope_Rep5 1574.8034193987799 1574.80177490379 47.169 3 -1.1608328876831928 0.35303639628702227 1.0 ['ENSG00000108960|ENST00000262065|MMD'] 62530 17007 LLSWKTSRATG True H1975_Epitope_Rep3 1218.67207087606 1218.67096993586 71.012 2 -1.1608908283087058 0.3530698703762251 1.0 ['ENSG00000213906|ENST00000533293|LTB4R2'] 29914 24084 FWKLSLSLFL True PC9_epitope_Rep2 1252.7219811906 1252.72033490379 98.141 3 -1.1610835944627975 0.3531144887585038 1.0 ['ENSG00000180875|ENST00000318160|GREM2'] 121522 9037 VGKIFSNVRI True PC9_epitope_Rep6 1131.67642798051 1131.67477490379 44.805 3 -1.1611164438223498 0.3531144887585038 1.0 ['ENSG00000105974|ENST00000341049|CAV1', 'nc|ENSG00000105974|Q03135-2|CAV1'] 90278 23871 RHRRRRLPQAV True PC9_epitope_Rep1 1443.87596468911 1443.87430490379 96.622 3 -1.1611336822554508 0.3531144887585038 1.0 ['ENST00000462917.1_1_17:39845146-39845518:+|nuORF'] 83583 3510 QDSVTFED True PC9_epitope_Rep4 939.38215602327 939.38104993586 19.584 2 -1.161189839883542 0.3531144887585038 1.0 ['ENSG00000188321|ENST00000603380|ZNF559', 'nc|ENSG00000188321|Q9BR84-2|ZNF559'] 101405 7495 SNELFTTFR True NCI_RA007_Epitope_Rep1 1113.5454733806098 1113.54436993586 33.145 2 -1.161194593069503 0.3531144887585038 1.0 ['ENSG00000086712|ENST00000380122|TXLNG', 'nc|ENSG00000086712|Q9NUQ3-2|TXLNG'] 70593 11327 LYYVYMGLL True PC9_epitope_Rep1 1133.5831047592899 1133.58200993586 48.448 2 -1.161205342848958 0.3531144887585038 1.0 ['ENST00000392834.7_1_11:118967710-118972378:-|nuORF', 'nc|ENSG00000172269|Q9H3H5-3|DPAGT1', 'nc|ENSG00000172269|Q9H3H5-2|DPAGT1', 'ENSG00000172269|ENST00000354202|DPAGT1', 'ENST00000414373.5_1_11:118967985-118971732:-|nuORF', 'ENST00000533687.1_1_11:118969111-118971155:-|nuORF'] 22698 5172 ETVKQGFQEKA True H1975_Epitope_Rep3 1263.6459156978697 1263.64426490379 24.994 3 -1.1612423344073464 0.3531144887585038 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 101133 17356 SLVKRAKRK True H1975_Epitope_Rep3 1084.7192958519997 1084.71877496793 72.415 1 -1.1612701479388716 0.3531263830056269 1.0 ['ENST00000484846.1_1_11:64622876-64622915:-|nuORF'] 63894 11625 LPVPQRAL True PC9_epitope_Rep1 892.54943656224 892.54832993586 49.593 2 -1.1612986993740049 0.3531263830056269 1.0 ['ENST00000562281.1_1_15:89422400-89424620:-|nuORF'] 122494 14226 VGSRPELR True NCI_RA007_Epitope_Rep3 912.5141136826799 912.5130099358599 63.268 2 -1.1613193716476078 0.3531263830056269 1.0 ['ENSG00000268480|ENST00000691075|NFILZ'] 121099 4578 VGGCHQHG True H1975_Epitope_Rep1 793.32895576529 793.32784993586 22.638 2 -1.161350245122562 0.3531345623751359 1.0 ['ENST00000537109.1_1_11:63999804-63999876:+|nuORF'] 58463 5463 LEWYGWQSIFY True H1975_Epitope_Rep3 1490.68705223386 1490.6859499358602 26.07 2 -1.161390156948812 0.3531553858409094 1.0 ['nc|ENSG00000101194|Q9BYT1-2|SLC17A9', 'ENSG00000101194|ENST00000370351|SLC17A9', 'ENST00000459704.6_1_20:61593743-61595647:+|nuORF', 'nc|ENSG00000101194|Q9BYT1-3|SLC17A9', 'ENST00000488738.5_1_20:61584086-61594126:+|nuORF'] 30029 15878 FYHKYFNYL True PC9_epitope_Rep6 1293.61824439805 1293.6171499358602 73.354 2 -1.1614424915879968 0.3531590992426254 1.0 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 133114 13384 WAWPRTPWRRW True NCI_RA007_Epitope_Rep2 1596.8214695047598 1596.82036993586 56.7 2 -1.161452385503649 0.3531590992426254 1.0 ['ENST00000608648.1_1_19:18235548-18239224:+|nuORF'] 10597 4572 CRSCWHWRH True PC9_epitope_Rep4 1269.53963432121 1269.5385299358602 24.083 2 -1.1615465244643985 0.35319256543178656 1.0 ['nc|ENSG00000214575|Q9BZB8-4|CPEB1', 'nc|ENSG00000214575|Q9BZB8-2|CPEB1', 'nc|ENSG00000214575|Q9BZB8-3|CPEB1', 'nc|ENSG00000214575|Q9BZB8|CPEB1', 'ENSG00000214575|ENST00000684509|CPEB1'] 49125 18391 KGFSTFSIL True PC9_epitope_Rep4 998.54368247546 998.54258993586 78.806 2 -1.161581494697994 0.35319998988545276 1.0 ['ENSG00000160321|ENST00000397126|ZNF208', 'ENSG00000196109|ENST00000397121|ZNF676'] 23198 13808 EVQAILRRNW True PC9_epitope_Rep3 1283.7098533671099 1283.7087499358602 58.19 2 -1.1616218612330276 0.35319998988545276 1.0 ['ENSG00000064989|ENST00000392370|CALCRL'] 36866 9543 GVQASVQPT True PC9_epitope_Rep5 885.4555957470499 885.45448993586 41.665 2 -1.161655895120573 0.35319998988545276 1.0 ['ENST00000264938.7_2_5:475749-476766:-|nuORF'] 63680 21250 LPPSEFLQV True PC9_epitope_Rep3 1028.5542471591598 1028.5531499358601 87.031 2 -1.1616658167715035 0.35319998988545276 1.0 ['ENST00000471480.6_1_22:30682838-30683547:-|nuORF', 'ENST00000492159.5_1_22:30683301-30685127:-|nuORF', 'ENST00000497605.6_1_22:30682689-30683547:-|nuORF', 'ENST00000418047.5_3_22:30682067-30689721:-|nuORF', 'ENST00000463795.5_1_22:30682689-30685486:-|nuORF', 'ENST00000434987.5_3_22:30681611-30689737:-|nuORF', 'ENST00000447976.1_3_22:30681611-30689721:-|nuORF', 'ENST00000330168.9_3_22:30681611-30688778:-|nuORF', 'ENSG00000239282|ENST00000407689|CASTOR1'] 55773 9088 LDEFLVKN True NCI_RA007_Epitope_Rep5 976.5229470308799 976.52184993586 41.612 2 -1.1618060959404648 0.35324609646627475 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000496360.5_1_1:39934274-39950491:+|nuORF', 'ENST00000497807.1_1_1:39934322-39950491:+|nuORF', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000127603|O94854|MACF1', 'ENST00000462496.5_1_1:39929295-39945768:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 44332 10621 IMEQFHMREI True PC9_epitope_Rep5 1332.6318629402 1332.63022490379 45.841 3 -1.1619163823066851 0.35326313660552894 1.0 ['ENSG00000213139|ENST00000307944|CRYGS'] 60421 17079 LIKMFCQL True PC9_epitope_Rep6 994.5343807450599 994.53328993586 78.263 2 -1.161994762824509 0.35326313660552894 1.0 ['TP53|p.N131I|3|0.58|ENSG00000141510|chr17:7675220-7675220|T/A|missense_variant'] 138241 9529 YQTHSETLS True H1975_Epitope_Rep2 1064.47745339044 1064.47634993586 41.624 2 -1.162035142400082 0.35326313660552894 1.0 ['PKHD1|p.I261T|1|0.11|ENSG00000170927|chr6:52066074-52066074|A/G|missense_variant'] 1725 8299 AEGRAVYVVDD True H1975_Epitope_Rep3 1192.5724164044398 1192.5713099358602 36.906 2 -1.162049622631197 0.35326313660552894 1.0 ['ENSG00000198841|ENST00000371614|KTI12'] 104212 19311 SSDMSAHVTSP True PC9_epitope_Rep1 1117.47098811101 1117.46988993586 79.085 2 -1.1621162693661902 0.35326313660552894 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 106885 21473 SYIERDVTPA True PC9_epitope_Rep5 1149.56660274801 1149.56607496793 87.63 1 -1.162120728362767 0.35326313660552894 1.0 ['ENSG00000157404|ENST00000288135|KIT', 'nc|ENSG00000157404|P10721-2|KIT', 'nc|ENSG00000157404|P10721-4|KIT', 'ENST00000512959.1_1_4:55595508-55599400:+|nuORF'] 128949 6816 VSVGGGGG True NCI_RA007_Epitope_Rep5 588.2867395168 588.2861949679301 32.904 1 -1.1621451130840836 0.35326313660552894 1.0 ['nc|ENSG00000100151|Q9NRD5-2|PICK1', 'ENST00000484021.5_1_22:38453431-38470088:+|nuORF'] 39333 4589 HLSIVWC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 1041.5429715622402 1041.5418699358602 22.477 2 -1.1621460650989683 0.35326313660552894 1.0 ['nc|ENSG00000197121|Q75T13-2|PGAP1', 'ENSG00000197121|ENST00000354764|PGAP1', 'nc|ENSG00000197121|Q75T13-3|PGAP1', 'nc|ENSG00000197121|Q75T13-4|PGAP1'] 18657 5379 ELAVKDAN True NCI_RA007_Epitope_Rep4 858.44469671018 858.44358993586 27.258 2 -1.1621501675134975 0.35326313660552894 1.0 ['CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF', 'ENST00000405771.3_1_6:134618472-134619126:-|nuORF'] 39336 11654 HLSMLEGKGP True PC9_epitope_Rep5 1067.54336520563 1067.54226993586 49.822 2 -1.1621589638275986 0.35326313660552894 1.0 ['ENST00000502490.1_1_5:14390521-14397340:+|nuORF'] 13273 12071 DLWIQVIP True NCI_RA007_Epitope_Rep3 982.5487678558999 982.54766993586 54.6 2 -1.162170972628685 0.35326313660552894 1.0 ['ENST00000315274.6_1_11:102661490-102662103:-|nuORF'] 23083 8665 EVLIPLIVIPV True NCI_RA007_Epitope_Rep5 1203.78424709399 1203.7825949037901 40.0 3 -1.1621894348331427 0.35326313660552894 1.0 ['ENSG00000122679|ENST00000242249|RAMP3'] 88742 17725 RDEKESNLRLK True H1975_Epitope_Rep3 1386.75792575834 1386.7568299358602 74.103 2 -1.1622003200526456 0.35326313660552894 1.0 ['ENSG00000243710|ENST00000372492|CFAP57'] 25756 12422 FFQNQRYYLK True NCI_RA007_Epitope_Rep5 1405.7142700412098 1405.7131699358602 54.439 2 -1.1622012839414777 0.35326313660552894 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1'] 211 12794 AAFLVTELLPP True H1975_Epitope_Rep3 1169.66961126457 1169.6685099358601 54.429 2 -1.1622269511039691 0.35326313660552894 1.0 ['nc|ENSG00000147535|Q8NEB5-4|PLPP5', 'ENST00000531823.5_1_8:38125951-38126678:-|nuORF', 'ENST00000528814.1_1_8:38126264-38126717:-|nuORF', 'nc|ENSG00000147535|Q8NEB5-2|PLPP5', 'ENSG00000147535|ENST00000424479|PLPP5'] 62455 14471 LLSKREDNV True PC9_epitope_Rep1 1072.58767254576 1072.58656993586 60.487 2 -1.1622272480050235 0.35326313660552894 1.0 ['ENST00000366960.7_1_1:213277810-213290668:+|nuORF'] 140028 13625 YVLLASEQL True PC9_epitope_Rep5 1034.5648118428599 1034.56370993586 57.431 2 -1.1622599518041028 0.35333451309535846 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 8998 6437 AVHTDKVQTLQ True PC9_epitope_Rep3 1238.66190011518 1238.66026490379 29.785 3 -1.1623621133370763 0.3534185279284062 1.0 ['ENSG00000136045|ENST00000412830|PWP1'] 108039 10159 TDEPVSKIR True PC9_epitope_Rep3 1043.56112344475 1043.56002993586 44.03 2 -1.1624230512160383 0.3534267007103673 1.0 ['DGKI|p.L486R|1|0.17|ENSG00000157680|chr7:137585315-137585315|A/C|missense_variant'] 22019 13764 ESQAAKDLLYR True NCI_RA007_Epitope_Rep2 1292.67246479888 1292.6713699358602 58.186 2 -1.162513911815565 0.35343411107459743 1.0 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 131357 5491 VVSDGALPAG True H1975_Epitope_Rep2 884.4603467743199 884.45924993586 26.134 2 -1.1625173930603954 0.35343411107459743 1.0 ['ENST00000369630.7_1_1:113266608-113266695:+|nuORF', 'ENST00000361886.3_1_1:113264878-113266695:+|nuORF'] 66408 23304 LSRHQKAHL True PC9_epitope_Rep1 1088.6203100867199 1088.61920993586 94.427 2 -1.1625255717856016 0.35343411107459743 1.0 ['ENSG00000204644|ENST00000376883|ZFP57', 'nc|ENSG00000204644|Q9NU63-2|ZFP57', 'nc|ENSG00000204644|Q9NU63|ZFP57'] 66286 10101 LSQFSLEK True PC9_epitope_Rep1 950.5072969667399 950.50618993586 43.725 2 -1.1625596362304813 0.35343411107459743 1.0 ['nc|ENSG00000214367|Q68CZ6-2|HAUS3', 'ENSG00000214367|ENST00000443786|HAUS3'] 75054 25619 NMERPVRYI True PC9_epitope_Rep4 1176.6073624445198 1176.60571490379 107.75 3 -1.1625696205965457 0.35344228314311354 1.0 ['nc|ENSG00000136754|Q8IZP0-10|ABI1', 'nc|ENSG00000136754|Q8IZP0-8|ABI1', 'nc|ENSG00000136754|Q8IZP0-7|ABI1', 'nc|ENSG00000136754|Q8IZP0-2|ABI1', 'nc|ENSG00000136754|Q8IZP0-4|ABI1', 'nc|ENSG00000136754|Q8IZP0-3|ABI1', 'nc|ENSG00000136754|Q8IZP0-5|ABI1', 'nc|ENSG00000136754|Q8IZP0-6|ABI1', 'ENSG00000136754|ENST00000376140|ABI1', 'nc|ENSG00000136754|Q8IZP0-12|ABI1', 'nc|ENSG00000136754|Q8IZP0|ABI1', 'ENST00000473481.1_1_10:27065936-27112150:-|nuORF'] 129978 12717 VTPASQSEMPD True PC9_epitope_Rep1 1160.50195388612 1160.50084993586 53.788 2 -1.1626910631624072 0.35346309403437814 1.0 ['nc|ENSG00000184182|Q969M7-5|UBE2F'] 22089 6944 ESTNSMETR True H1975_Epitope_Rep3 1053.43968798273 1053.4385899358601 31.671 2 -1.1626969891844436 0.353471265530011 1.0 ['ENSG00000155959|ENST00000286428|VBP1', 'nc|ENSG00000155959|P61758-2|VBP1'] 8488 5663 ATVDNWSQIQS True H1975_Epitope_Rep1 1247.57823006087 1247.57712993586 26.852 2 -1.1627160841970479 0.3534794368190895 1.0 ['nc|ENSG00000198203|O00338-2|SULT1C2', 'ENSG00000198203|ENST00000251481|SULT1C2', 'SULT1C2|p.M146*|1|0.28|ENSG00000198203|chr2:108304632-108304632|G/-|frameshift_variant'] 18864 7584 ELEKFDVKS True H1975_Epitope_Rep1 1093.5655401188499 1093.56444993586 34.164 2 -1.1627216545761418 0.35348314038724027 1.0 ['CON__Q05443'] 38390 12707 HGGIATIF True PC9_epitope_Rep5 814.4337381036601 814.43264993586 53.883 2 -1.162722917413133 0.35348314038724027 1.0 ['ENSG00000006625|ENST00000275428|GGCT', 'nc|ENSG00000006625|O75223-4|GGCT', 'nc|ENSG00000006625|O75223-2|GGCT'] 122972 19012 VGWQLKNLVKK True PC9_epitope_Rep2 1311.8026911227896 1311.80104490379 78.494 3 -1.1627997760502342 0.3535031847133758 1.0 ['nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENSG00000153721|ENST00000607772|CNKSR3', 'ENST00000433165.6_1_6:154727490-154754936:-|nuORF'] 20986 5462 ERAHSVDPRD True H1975_Epitope_Rep3 1180.5584976757998 1180.55686490379 26.065 3 -1.162831601017204 0.3535031847133758 1.0 ['ENSG00000178752|ENST00000546354|ERFE'] 8382 5434 ATPAGHPV True NCI_RA007_Epitope_Rep5 748.38678791124 748.38568993586 27.589 2 -1.1628325733106963 0.3535031847133758 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 64924 17412 LSCHCHSC True PC9_epitope_Rep2 888.3040635404002 888.30296993586 72.234 2 -1.1628331440998736 0.3535031847133758 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 133627 24147 WKFRAMRKI True PC9_epitope_Rep2 1234.7121022965798 1234.7110099358601 98.407 2 -1.1629209488808951 0.3535321622646278 1.0 ['ENST00000530606.1_1_10:77055306-77055468:+|nuORF'] 59678 21620 LGTEIKPI True PC9_epitope_Rep1 869.5222187548899 869.52112993586 87.987 2 -1.1629219252479477 0.3535321622646278 1.0 ['ENSG00000110367|ENST00000534980|DDX6'] 139590 11063 YTPPFDLYYLT True H1975_Epitope_Rep2 1391.66491980695 1391.6638299358601 47.584 2 -1.162936900952863 0.35354033185477246 1.0 ['PRUNE2|p.S2399Y|1|0.09|ENSG00000106772|chr9:76705078-76705078|G/T|missense_variant'] 6517 15262 APVAAAALA True NCI_RA007_Epitope_Rep5 753.43848913093 753.43738993586 65.397 2 -1.162969914770043 0.3535611383511095 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 58892 16457 LFTLSLKTS True PC9_epitope_Rep4 1008.58554728744 1008.58444993586 71.271 2 -1.1630025724069923 0.3535819443215852 1.0 ['ENST00000447399.6_1_11:9772021-9772270:+|nuORF'] 50506 11282 KKKKKKKKQ True NCI_RA007_Epitope_Rep5 1170.8288463009799 1170.82720490379 50.039 3 -1.1631350541000118 0.35361538655950664 1.0 ['ENSG00000147649|ENST00000336273|MTDH'] 137323 16292 YLIKDIRFL True PC9_epitope_Rep1 1179.7015800991899 1179.6999449037899 67.485 3 -1.1631714870810907 0.3536227855139124 1.0 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000466614.1_1_22:30983271-30987820:-|nuORF'] 43754 22255 IIVPLVVFLPR True PC9_epitope_Rep5 1264.82711496548 1264.8260099358602 90.611 2 -1.1632546372497743 0.3536227855139124 1.0 ['ENST00000435683.6_1_19:1042703-1043196:+|nuORF'] 115222 14020 TVCHDRWST True PC9_epitope_Rep1 1103.48182757823 1103.4807299358602 58.766 2 -1.1632825006231817 0.3536227855139124 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1'] 75103 1843 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 10.196 3 -1.1633033096537055 0.3536227855139124 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 86646 27435 QRFFQGGL True PC9_epitope_Rep1 951.4926499621097 951.49154993586 112.21 2 -1.163347825314028 0.35368149711267516 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 60020 17381 LHRHPSLSL True PC9_epitope_Rep4 1058.59851201298 1058.59740993586 74.858 2 -1.1634521643684999 0.353727571392469 1.0 ['CLEC4F|p.W538Sfs*51|1|0.2|ENSG00000152672|chr2:70809783-70809784|CC/-|frameshift_variant'] 75091 70 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 0.38349 3 -1.1634936120199022 0.35373126784766623 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 88545 24216 RAGFSTQP True H1975_Epitope_Rep3 862.4297153523798 862.42860993586 100.88 2 -1.1635000585025734 0.35373126784766623 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 36501 6940 GVKGAKIK True PC9_epitope_Rep2 799.5279728416699 799.52686993586 32.095 2 -1.1635501349652897 0.35373866019760947 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 109262 9762 TGAHEIEVGV True PC9_epitope_Rep5 1010.5032742154599 1010.50216993586 42.521 2 -1.1635754112786043 0.35373866019760947 1.0 ['MYOM3|p.P900T|2|0.33|ENSG00000142661|chr1:24076162-24076162|G/T|missense_variant'] 18109 11401 EILGTEEFFD True H1975_Epitope_Rep3 1198.5393849406598 1198.5382899358601 48.97 2 -1.1635823651736699 0.35373866019760947 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 117628 13979 VAIEHLDK True PC9_epitope_Rep6 923.5076313199099 923.50652993586 65.629 2 -1.1636192462940247 0.35373866019760947 1.0 ['nc|ENSG00000150753|P48643-2|CCT5', 'ENSG00000150753|ENST00000280326|CCT5'] 92715 13736 RRIKTRTAST True NCI_RA007_Epitope_Rep5 1188.7051023398399 1188.7034549037899 59.52 3 -1.1636308812045069 0.3537468255271836 1.0 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE'] 64921 16867 LSCHCHSC True PC9_epitope_Rep2 888.3040635404002 888.30296993586 70.126 2 -1.16366920057552 0.3537505211689345 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 5191 9676 ALPLTQGQ True NCI_RA007_Epitope_Rep2 826.45486747106 826.45376993586 42.257 2 -1.1636936005969198 0.3537505211689345 1.0 ['nc|ENSG00000127415|P35475-2|IDUA', 'ENSG00000127415|ENST00000514224|IDUA', 'ENST00000514698.5_1_4:980866-997838:+|nuORF'] 100526 9220 SLPSLGKSL True NCI_RA007_Epitope_Rep4 900.52803241132 900.52692993586 42.314 2 -1.1637605086262302 0.3537965887555275 1.0 ['ENST00000379707.7_1_9:33255219-33262163:-|nuORF'] 106050 8405 SVLRSDSSP True H1975_Epitope_Rep3 946.47197408718 946.47086993586 37.314 2 -1.163817288598613 0.35386792333640765 1.0 ['ENSG00000278803|ENST00000458091|PWWP4'] 73437 8298 NESNRPDLL True PC9_epitope_Rep5 1056.5199869087598 1056.5188899358602 36.857 2 -1.1639735097186035 0.3538887204366283 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2'] 32880 17767 GILNVIKPL True PC9_epitope_Rep1 965.62735252977 965.62624993586 73.138 2 -1.1639948475469655 0.35389241225964574 1.0 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-1|CDH26', 'CDH26|p.Q399Rfs*29|1|0.3|ENSG00000124215|chr20:59989071-59989071|C/-|frameshift_variant'] 57208 4736 LEEWCPHF True NCI_RA007_Epitope_Rep5 1059.4484021916298 1059.4473099358602 24.901 2 -1.1640012801358939 0.35389241225964574 1.0 ['ENST00000476883.5_1_1:153925810-153930559:-|nuORF'] 67989 15253 LTLSQKRPYVD True NCI_RA007_Epitope_Rep1 1318.7245003717399 1318.7234099358602 63.405 2 -1.164024639818899 0.3538961038961039 1.0 ['nc|ENSG00000171056|Q9BT81-2|SOX7', 'ENSG00000171056|ENST00000304501|SOX7'] 68937 25053 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 104.93 3 -1.1640328604773904 0.3538961038961039 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 112621 10363 TPDRIRWRRWR True NCI_RA007_Epitope_Rep2 1596.8861950196397 1596.8845349037902 44.901 3 -1.1641008701699878 0.3539421655696906 1.0 ['ENST00000256858.10_2_18:59854532-59854781:+|nuORF'] 18114 15783 EILPFEKM True H1975_Epitope_Rep2 1005.52050450273 1005.51940993586 65.89 2 -1.1641336653744647 0.3539711214138632 1.0 ['ENSG00000137776|ENST00000380516|SLTM', 'nc|ENSG00000137776|Q9NWH9-3|SLTM'] 550 7912 AAQQPHIAGV True PC9_epitope_Rep5 990.5246783663799 990.52358993586 35.375 2 -1.1641351932945005 0.3539711214138632 1.0 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2'] 6643 5189 APYTFSFEM True H1975_Epitope_Rep3 1091.4633835494299 1091.46228993586 25.055 2 -1.164158472906722 0.35398744331173176 1.0 ['ENSG00000145198|ENST00000691901|VWA5B2'] 84989 6404 QIEAVLLNS True PC9_epitope_Rep4 985.54441075145 985.54330993586 31.724 2 -1.164208090831126 0.35398744331173176 1.0 ['GCN1L1-CCND2|1|fusion', 'ENSG00000118971|ENST00000261254|CCND2'] 52914 11434 KRIDNLLKYFY True NCI_RA007_Epitope_Rep3 1471.81873510975 1471.8170849037901 52.098 3 -1.1642320681634906 0.3539956039513908 1.0 ['ENST00000477822.2_1_6:153291978-153292182:-|nuORF'] 75082 1612 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 8.8657 3 -1.1643472503750436 0.35406692520495686 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 39435 17147 HMPPRRCRP True PC9_epitope_Rep3 1148.5807708572 1148.57911490379 71.112 3 -1.1644048710423625 0.3540832438577654 1.0 ['nc|ENSG00000115598|Q9HB29-2|IL1RL2', 'ENSG00000115598|ENST00000264257|IL1RL2'] 14452 9805 DTPLHAAL True PC9_epitope_Rep2 836.43921740692 836.43812993586 43.052 2 -1.1644124404073588 0.3540832438577654 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 125090 25872 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 104.63 3 -1.1644238758251553 0.3540914028749716 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 36246 13969 GVGGILKD True PC9_epitope_Rep4 757.43340375049 757.4328549679301 61.636 1 -1.1645006081028733 0.3541411411032096 1.0 ['ENST00000252032.9_1_20:3232842-3233022:-|nuORF'] 43572 17338 IIERVTGLPA True PC9_epitope_Rep3 1067.6338944621898 1067.63278993586 71.864 2 -1.164501126487426 0.3541411411032096 1.0 ['ENST00000495399.1_1_9:72435845-72472969:+|nuORF', 'ENST00000466872.2_1_9:72435815-72501795:+|nuORF', 'nc|ENSG00000204711|Q5VTT2-2|CFAP95', 'ENST00000529131.5_1_9:72435824-72520897:+|nuORF', 'ENSG00000204711|ENST00000377197|CFAP95'] 120978 14012 VGERWHPY True PC9_epitope_Rep6 1042.49846361854 1042.4973699358602 65.751 2 -1.1645134282500116 0.3541411411032096 1.0 ['nc|ENSG00000101938|Q9BU40-3|CHRDL1', 'nc|ENSG00000101938|Q9BU40|CHRDL1', 'nc|ENSG00000101938|Q9BU40-5|CHRDL1', 'ENSG00000101938|ENST00000372042|CHRDL1'] 290 3999 AAHHAQVR True NCI_RA007_Epitope_Rep4 888.4678321965999 888.46672993586 21.635 2 -1.164522214043818 0.35417008753205087 1.0 ['ENST00000571376.1_1_17:1518302-1531133:-|nuORF'] 63356 10148 LPERRRQGCS True PC9_epitope_Rep5 1200.6145730832798 1200.6134699358602 44.021 2 -1.1645281872746787 0.35417008753205087 1.0 ['ENST00000369239.9_1_6:99864293-99873181:-|nuORF', 'ENST00000438806.5_1_6:99862543-99873181:-|nuORF'] 68633 7835 LVAGQSKTSP True NCI_RA007_Epitope_Rep5 986.53965972418 986.53856993586 36.836 2 -1.164553673592075 0.3541766652352926 1.0 ['ENST00000560374.5_1_15:83654729-83654861:-|nuORF'] 99984 12694 SLISKHGTL True PC9_epitope_Rep1 954.5498304850599 954.54872993586 53.699 2 -1.1645751706679435 0.3541766652352926 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 126757 8105 VPSGLEPFG True NCI_RA007_Epitope_Rep2 901.4545331178899 901.4539849679301 36.159 1 -1.1646182194107013 0.3541766652352926 1.0 ['ENST00000255194.10_2_5:77590392-77590476:-|nuORF'] 27182 16340 FLSQLHLGFL True PC9_epitope_Rep2 1173.6546299067697 1173.65299490379 68.098 3 -1.1646310941940716 0.3541766652352926 1.0 ['ENST00000374072.5_1_20:34287595-34288825:+|nuORF'] 46007 10445 ISVAKVNCVK True PC9_epitope_Rep4 1059.61105084263 1059.6099499358602 47.888 2 -1.1646375330365724 0.3541766652352926 1.0 ['TXNDC16|p.W800Lfs*3|1|0.17|ENSG00000087301|chr14:52432383-52432384|-/A|frameshift_variant', 'ENSG00000087301|ENST00000281741|TXNDC16'] 2617 4939 AESNQQFRDL True H1975_Epitope_Rep2 1206.5629143499 1206.56180993586 24.081 2 -1.1646449954842086 0.3541766652352926 1.0 ['nc|ENSG00000243967|Q86XG9|NBPF5P', 'ENSG00000196427|ENST00000415641|NBPF4', 'ENSG00000186086|ENST00000495380|NBPF6', 'nc|ENSG00000186086|Q5VWK0-2|NBPF6'] 128932 5182 VSTTTVAS True PC9_epitope_Rep4 764.39159850816 764.39050993586 26.63 2 -1.1646519191601679 0.3541766652352926 1.0 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'ENSG00000169876|ENST00000306151|MUC17', 'MUC17|p.V2173Wfs*20|1|0.14|ENSG00000169876|chr7:101037932-101037932|G/-|frameshift_variant'] 32531 6928 GGSFKNPS True NCI_RA007_Epitope_Rep2 792.37661715036 792.37552993586 31.568 2 -1.1647004733342914 0.35418034857287195 1.0 ['ENSG00000109929|ENST00000264027|SC5D'] 56840 16620 LEDDTHSQV True PC9_epitope_Rep5 1042.4567179458602 1042.45562993586 68.934 2 -1.1647506715836013 0.35418034857287195 1.0 ['ENSG00000229674|ENST00000448797|H2AL3'] 28740 14530 FSWRSILT True PC9_epitope_Rep2 1008.5392658013599 1008.5386749679301 61.162 1 -1.1647845338413227 0.35418850481807507 1.0 ['ENSG00000181450|ENST00000343776|ZNF678'] 48310 12018 KDPNNLFMVRL True PC9_epitope_Rep5 1345.71764116949 1345.71598490379 51.222 3 -1.1648370511008852 0.35421297231763993 1.0 ['ENSG00000175166|ENST00000310118|PSMD2', 'nc|ENSG00000175166|Q13200-3|PSMD2', 'nc|ENSG00000175166|Q13200-2|PSMD2'] 35383 10724 GTCLPNALSP True H1975_Epitope_Rep3 971.4746169394699 971.4740649679301 46.326 1 -1.164870675605888 0.35421297231763993 1.0 ['ENSG00000215421|ENST00000299687|ZNF407', 'nc|ENSG00000215421|Q9C0G0-3|ZNF407', 'nc|ENSG00000215421|Q9C0G0-2|ZNF407'] 16506 6590 EENFLWMPAL True PC9_epitope_Rep5 1248.58489566444 1248.58378993586 30.319 2 -1.1648862517282734 0.35421297231763993 1.0 ['ENST00000360317.7_1_17:38073357-38073465:-|nuORF'] 130087 7480 VTQQLLDDP True PC9_epitope_Rep5 1027.5185899264297 1027.51748993586 33.724 2 -1.1649861595246265 0.3542924254287374 1.0 ['ENSG00000114771|ENST00000232892|AADAC'] 115271 10860 TVDLNRVLN True PC9_epitope_Rep2 1042.5771078620598 1042.5760099358602 47.091 2 -1.1650202592260084 0.3542924254287374 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630', 'ENSG00000094796|ENST00000251645|KRT31', 'CON__Q9UE12', 'CON__Q15323'] 22597 6052 ETPQTVPA True PC9_epitope_Rep2 841.4181476091699 841.41704993586 28.671 2 -1.1650688940610414 0.35432136182249835 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 115264 9498 TVDKHYRDF True NCI_RA007_Epitope_Rep3 1179.56727145435 1179.56563490379 44.456 3 -1.1650976466178666 0.35432136182249835 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'ENST00000494648.1_1_3:124174014-124181481:+|nuORF', 'nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN'] 41325 19014 IAKNIYII True PC9_epitope_Rep3 946.5851533646198 946.58404993586 78.359 2 -1.1651307534639608 0.35432951546300623 1.0 ['ENST00000374884.2_2_X:62570747-62571134:-|nuORF'] 48091 26275 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 109.15 3 -1.1651531954424943 0.3543458221262517 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 125367 11602 VLSRSDPSL True PC9_epitope_Rep2 972.52400966004 972.52290993586 49.952 2 -1.165155721312156 0.3543458221262517 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF'] 42250 15906 IEHIQVNKAP True PC9_epitope_Rep2 1147.6349570913499 1147.63386993586 66.435 2 -1.1652255837340124 0.3543666026871401 1.0 ['ENSG00000265681|ENST00000580261|RPL17', 'nc|ENSG00000265681|P18621-3|RPL17', 'nc|ENSG00000265681|P18621-2|RPL17', 'ENST00000414070.1_1_1:109535017-109535455:+|nuORF', 'ENST00000446498.1_1_1:26781156-26781564:-|nuORF', 'ENST00000394133.2_1_10:95043842-95044274:-|nuORF'] 112168 7719 TLVNNTRTI True PC9_epitope_Rep6 1030.57710786206 1030.5760099358602 39.042 2 -1.1653403820533124 0.35442526485926784 1.0 ['ENST00000379883.2_1_9:32487998-32488040:-|nuORF'] 5804 5159 APFHTGDDRFL True PC9_epitope_Rep1 1274.6043852390596 1274.6027249037902 24.696 3 -1.1654790243701172 0.3544415682808258 1.0 ['ENST00000399413.3_1_17:7983259-7983811:+|nuORF'] 74918 13492 NLSLKNWQRVH True H1975_Epitope_Rep1 1393.75786618869 1393.7567699358601 57.016 2 -1.1654806175872086 0.3544415682808258 1.0 ['ENST00000262198.8_1_18:77895463-77895511:+|nuORF'] 45896 3036 ISREQMILWD True NCI_RA007_Epitope_Rep1 1289.6438075228898 1289.64217490379 15.685 3 -1.1655081345789575 0.35444444444444445 1.0 ['nc|ENSG00000152270|Q13370-2|PDE3B', 'ENSG00000152270|ENST00000282096|PDE3B', 'ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 71737 4514 MMHCMWWERWM True NCI_RA007_Epitope_Rep2 1625.6222439399698 1625.62114993586 22.19 2 -1.1655082774950798 0.35444444444444445 1.0 ['ENST00000301180.9_1_12:51133363-51135252:+|nuORF'] 20167 11200 ENQELKDSC True PC9_epitope_Rep4 1064.44443901 1064.4433499358602 50.858 2 -1.1655383190351931 0.35444444444444445 1.0 ['nc|ENSG00000136436|Q13137-5|CALCOCO2', 'ENSG00000136436|ENST00000258947|CALCOCO2', 'nc|ENSG00000136436|Q13137-3|CALCOCO2', 'nc|ENSG00000136436|Q13137-4|CALCOCO2'] 65711 5785 LSHNQIEELP True PC9_epitope_Rep1 1178.59315184902 1178.59150490379 27.068 3 -1.1655726423824202 0.35444444444444445 1.0 ['nc|ENSG00000133067|Q9HBX8-1|LGR6', 'nc|ENSG00000133067|Q9HBX8-2|LGR6', 'ENSG00000133067|ENST00000367278|LGR6'] 45521 10400 ISFCQYLLL True H1975_Epitope_Rep1 1098.5783537320199 1098.5772499358602 44.953 2 -1.165612813921322 0.35444444444444445 1.0 ['UGT8|p.F473L|1|0.2|ENSG00000174607|chr4:114676081-114676081|T/G|missense_variant'] 125062 24852 VLPGKKKKKT True H1975_Epitope_Rep3 1125.75976368165 1125.75811490379 103.37 3 -1.1656961739419782 0.3545096454903545 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 38054 10085 HELLLTVLWY True H1975_Epitope_Rep3 1285.7070594024499 1285.7059699358601 43.831 2 -1.1656992449167973 0.3545096454903545 1.0 ['nc|ENSG00000134444|Q9P260|RELCH', 'ENSG00000134444|ENST00000644646|RELCH', 'nc|ENSG00000134444|Q9P260-2|RELCH'] 119365 17611 VENLKKQI True PC9_epitope_Rep2 970.5811306133398 970.58002993586 73.018 2 -1.1657144578098548 0.3545096454903545 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 56580 5942 LDVYFEYEEK True NCI_RA007_Epitope_Rep1 1333.6077988536497 1333.6067099358602 27.16 2 -1.1657362027636884 0.3545096454903545 1.0 ['ENST00000555259.5_1_14:31112578-31185169:+|nuORF', 'nc|ENSG00000092108|Q8WVM8-2|SCFD1', 'nc|ENSG00000092108|Q8WVM8-3|SCFD1', 'ENSG00000092108|ENST00000458591|SCFD1'] 2164 6105 AEMLDDLMEKR True NCI_RA007_Epitope_Rep1 1349.6319225098498 1349.6308299358602 27.785 2 -1.1657821017311691 0.3545096454903545 1.0 ['ENST00000469238.1_1_1:33480014-33487286:-|nuORF', 'nc|ENSG00000004455|P54819-4|AK2', 'ENST00000427762.1_1_1:59096724-59097153:-|nuORF', 'nc|ENSG00000004455|P54819-6|AK2', 'nc|ENSG00000004455|P54819-3|AK2', 'nc|ENSG00000004455|P54819-5|AK2', 'nc|ENSG00000004455|P54819-2|AK2', 'ENSG00000004455|ENST00000672715|AK2'] 98364 8991 SIHLQRWDKYS True H1975_Epitope_Rep1 1431.7258973540702 1431.72480993586 39.49 2 -1.1658454093674493 0.3545096454903545 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF'] 133421 9219 WFWQDRFWLPP True PC9_epitope_Rep1 1576.7615545867998 1576.7599049037901 40.313 3 -1.165879491701747 0.3545096454903545 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 44660 19744 IPLIERLQRN True NCI_RA007_Epitope_Rep5 1250.7459045226599 1250.74426490379 82.856 3 -1.1659323933982806 0.3545096454903545 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 22424 4463 ETFNSPSMYIA True H1975_Epitope_Rep3 1258.55398945898 1258.55288993586 22.287 2 -1.1659377249629799 0.3545177946950473 1.0 ['ENST00000567299.1_1_19:9629420-9629708:+|nuORF'] 125227 11880 VLQRPNLQKYV True H1975_Epitope_Rep1 1356.7877693346402 1356.7866699358601 50.696 2 -1.1660190192183935 0.35453856836258046 1.0 ['ENSG00000132953|ENST00000255305|XPO4'] 68993 6575 LVGQSGGGK True NCI_RA007_Epitope_Rep2 801.4344663796498 801.43336993586 30.189 2 -1.1661103649851137 0.35458378569444793 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000466514.5_1_7:150731570-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-5|ABCB8', 'ENST00000482899.1_1_7:150737654-150742433:+|nuORF', 'nc|ENSG00000197150|Q9NUT2-3|ABCB8', 'ENSG00000197150|ENST00000358849|ABCB8', 'nc|ENSG00000197150|Q9NUT2|ABCB8'] 4855 10191 ALFSEILYRFP True PC9_epitope_Rep2 1354.7285231230198 1354.72742993586 44.536 2 -1.1661116515017311 0.35458378569444793 1.0 ['GTF2H4|p.M334I|1|0.19|ENSG00000213780|chr6:30912371-30912371|G/T|missense_variant'] 99740 13921 SLGISYDDPKK True PC9_epitope_Rep2 1221.62411762413 1221.6230299358601 58.827 2 -1.1661269582111107 0.35458378569444793 1.0 ['ENSG00000197140|ENST00000379907|ADAM32'] 19717 9212 ELSLLEKSL True PC9_epitope_Rep6 1030.5910265907 1030.58992993586 45.573 2 -1.16612887515097 0.35458378569444793 1.0 ['nc|ENSG00000124802|O43324-2|EEF1E1', 'ENSG00000124802|ENST00000379715|EEF1E1'] 104438 14455 SSLETFLVK True NCI_RA007_Epitope_Rep1 1022.5648118428599 1022.56370993586 60.272 2 -1.166156761517418 0.3545874570793779 1.0 ['ENST00000543605.5_1_20:44987233-44987329:-|nuORF'] 72312 13219 MSKEQLFIFR True NCI_RA007_Epitope_Rep2 1297.68527841205 1297.68477496793 56.051 1 -1.166158623362343 0.3545874570793779 1.0 ['ENST00000563980.5_1_16:90088575-90097598:+|nuORF'] 110966 7489 TLDARGKTP True NCI_RA007_Epitope_Rep1 957.5243440132099 957.52324993586 33.122 2 -1.1661807270034332 0.3545911282789265 1.0 ['ENST00000427199.2_1_5:114916936-114937963:-|nuORF'] 76883 7294 NVIVRLIEQAP True NCI_RA007_Epitope_Rep4 1250.73467113262 1250.73356993586 34.692 2 -1.166185771298218 0.3545911282789265 1.0 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 79067 9981 PFSPPFPSL True PC9_epitope_Rep4 987.50656869075 987.50546993586 46.052 2 -1.1662125986356235 0.3545992754263497 1.0 ['ENST00000301043.10_2_17:27043073-27045236:-|nuORF', 'ENST00000353676.9_1_17:27043073-27045236:-|nuORF'] 14908 14766 DYKGDATVFF True PC9_epitope_Rep4 1161.5342399905699 1161.5331499358601 64.731 2 -1.1662905643135402 0.35464529159303204 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 92594 7428 RRDWDCFWKRK True H1975_Epitope_Rep2 1594.7939344275794 1594.7922749037898 33.517 3 -1.1663844097721938 0.35465629969959356 1.0 ['nc|ENSG00000151418|Q96LB4-3|ATP6V1G3'] 122503 20577 VGSRSVAGV True PC9_epitope_Rep3 830.4610154806599 830.45990993586 84.416 2 -1.1664259106271282 0.35465629969959356 1.0 ['ENSG00000144659|ENST00000650617|SLC25A38'] 662 2622 AATTEKAKK True NCI_RA007_Epitope_Rep4 946.5447451046199 946.54364993586 14.708 2 -1.1665198110912574 0.35465629969959356 1.0 ['nc|ENSG00000170473|Q9BRP8-2|PYM1', 'ENSG00000170473|ENST00000408946|PYM1'] 18913 8775 ELERALHQAK True H1975_Epitope_Rep3 1193.6516697846498 1193.6500349037901 38.76 3 -1.1665313181651802 0.35465629969959356 1.0 ['CON__Q6NXH9'] 30170 7041 FYTEWWREKRM True NCI_RA007_Epitope_Rep2 1630.7714676474995 1630.7703699358601 32.012 2 -1.1665355588718345 0.35465629969959356 1.0 ['ENST00000292599.3_1_5:179203171-179203312:+|nuORF'] 68497 15883 LTVLCMPGVI True PC9_epitope_Rep4 1044.5711601766 1044.5700699358601 69.025 2 -1.1665793826092794 0.35465629969959356 1.0 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9'] 30940 10464 GASLELSPER True H1975_Epitope_Rep1 1057.54038800017 1057.53928993586 45.204 2 -1.1666136504051015 0.35466444520176205 1.0 ['ENSG00000250799|ENST00000653904|PRODH2'] 81926 8407 PSPFPEVWHTM True PC9_epitope_Rep5 1326.6066937381797 1326.60505490379 37.278 3 -1.166629465200173 0.3546725904983087 1.0 ['ENST00000469098.1_1_2:37594344-37599967:+|nuORF', 'nc|ENSG00000115828|Q16769-2|QPCT', 'ENSG00000115828|ENST00000338415|QPCT'] 66678 4538 LSSWACLHLWS True H1975_Epitope_Rep1 1301.62267815549 1301.6210249037902 22.482 3 -1.1666665002878711 0.35468807188923807 1.0 ['ENST00000490681.1_1_3:52566230-52566458:-|nuORF'] 41492 8929 ICLEEEVLP True PC9_epitope_Rep5 1043.5208984255498 1043.5198099358602 39.29 2 -1.1666778759186704 0.35468807188923807 1.0 ['ENSG00000184575|ENST00000332707|XPOT'] 111269 15388 TLGTLQPPD True PC9_epitope_Rep1 940.48656152216 940.48601496793 64.008 1 -1.1667023590679066 0.35468807188923807 1.0 ['ENST00000215906.5_1_22:26839610-26839709:+|nuORF'] 79840 21414 PIFYISQLP True PC9_epitope_Rep6 1076.5906326678798 1076.5895299358601 95.242 2 -1.1667158313576322 0.35468807188923807 1.0 ['nc|ENSG00000176198|Q8NGC9|OR11H4', 'ENSG00000176198|ENST00000641082|OR11H4'] 44003 7311 ILHSVYECIAK True NCI_RA007_Epitope_Rep2 1274.66929399474 1274.66818993586 33.06 2 -1.1667203520155351 0.35468807188923807 1.0 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF'] 133861 3580 WMCLAAAL True PC9_epitope_Rep4 877.4190166396498 877.41790993586 19.866 2 -1.1668148234211253 0.35469621627079284 1.0 ['ENST00000524501.1_1_11:89867926-89868807:+|nuORF', 'nc|ENSG00000077616|Q9Y3Q0-2|NAALAD2', 'ENSG00000077616|ENST00000534061|NAALAD2'] 79173 8583 PGEDELTER True H1975_Epitope_Rep1 1044.4723680099999 1044.4712699358602 37.942 2 -1.1668708019724623 0.3547422225026819 1.0 ['ENSG00000162341|ENST00000294309|TPCN2'] 100730 5632 SLRIQCSFTQ True NCI_RA007_Epitope_Rep4 1181.58629264677 1181.5846349037902 28.265 3 -1.1669116203081267 0.35475036599525467 1.0 ['ENST00000549928.5_1_12:60154925-60173457:+|nuORF', 'ENST00000549588.5_1_12:60098582-60157842:+|nuORF'] 108929 20707 TETEKKKKK True NCI_RA007_Epitope_Rep5 1118.6659228664598 1118.66482993586 86.612 2 -1.1669627243025442 0.35477112964902763 1.0 ['nc|ENSG00000154451|Q96PP8-2|GBP5'] 120824 18129 VGDKKKRS True PC9_epitope_Rep4 916.54541381096 916.54430993586 77.798 2 -1.1670074351286237 0.3547792725712411 1.0 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-4|PRDM2'] 39630 16186 HPPPCFAV True PC9_epitope_Rep2 866.4108944841 866.40978993586 67.512 2 -1.167038675647375 0.35480003533613497 1.0 ['ENST00000569193.1_1_16:46957913-46962906:+|nuORF'] 63354 13949 LPEPLSVTAP True H1975_Epitope_Rep3 1022.56481184286 1022.56370993586 58.971 2 -1.1671903368531713 0.3548920382125415 1.0 ['ENST00000264025.7_1_11:119535043-119535469:-|nuORF'] 116028 9411 TVRFKNEL True PC9_epitope_Rep2 1005.5607295219299 1005.55962993586 41.539 2 -1.167250294108183 0.3548920382125415 1.0 ['ENSG00000130741|ENST00000253039|EIF2S3', 'ENSG00000180574|ENST00000538173|EIF2S3B', 'nc|ENSG00000180574|Q2VIR3-2|EIF2S3B'] 120486 19228 VFVQRLSL True PC9_epitope_Rep5 960.5756513100798 960.57454993586 79.0 2 -1.1672899021069958 0.35490384130028774 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 45681 7066 ISKTKEAA True PC9_epitope_Rep5 846.4810822188999 846.47998993586 32.147 2 -1.167296108775775 0.35490384130028774 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2'] 86538 26400 QRAPKPLPRV True NCI_RA007_Epitope_Rep1 1160.71421047156 1160.71310993586 109.26 2 -1.1673037460929518 0.35490384130028774 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 34139 6773 GPDCATKL True NCI_RA007_Epitope_Rep2 803.38473930591 803.3841949679301 30.96 1 -1.1674322278190266 0.35493558440902956 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8'] 98613 12688 SINSHATEWSP True H1975_Epitope_Rep1 1227.55201531303 1227.5514749679298 53.86 1 -1.1674829517176522 0.35493558440902956 1.0 ['nc|ENSG00000066855|Q15390-2|MTFR1'] 45873 11306 ISQNSLTKIVP True H1975_Epitope_Rep3 1198.6921376143 1198.69104993586 48.594 2 -1.167488620985413 0.35493558440902956 1.0 ['nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF'] 140153 12144 YVSVPGSK True PC9_epitope_Rep3 835.4439684341899 835.44286993586 51.753 2 -1.1675002453436956 0.35493558440902956 1.0 ['ENSG00000265972|ENST00000582401|TXNIP', 'TXNIP|p.K287Efs*5|1|0.16|ENSG00000265972|chr1:145994411-145994412|-/T|frameshift_variant', 'nc|ENSG00000265972|Q9H3M7-2|TXNIP'] 134847 5754 WYYYSLRFYST True H1975_Epitope_Rep3 1547.7085159544297 1547.70688490379 27.159 3 -1.1675059085948878 0.35493558440902956 1.0 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 80891 12335 PLYEPEPEPRD True NCI_RA007_Epitope_Rep1 1340.62484590012 1340.6237499358601 51.953 2 -1.1675379408933981 0.35493558440902956 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 67410 21428 LTEAGSPVKL True PC9_epitope_Rep2 1013.5757108797299 1013.5746099358599 87.895 2 -1.1675539652781612 0.35493558440902956 1.0 ['nc|ENSG00000124256|Q9H171-5|ZBP1', 'ENST00000480037.1_1_20:56191111-56195351:-|nuORF', 'ENST00000432548.2_1_20:56190212-56195528:-|nuORF', 'ENST00000461547.5_1_20:56191111-56191654:-|nuORF', 'nc|ENSG00000124256|Q9H171-6|ZBP1', 'nc|ENSG00000124256|Q9H171-3|ZBP1', 'nc|ENSG00000124256|Q9H171-4|ZBP1', 'ENSG00000124256|ENST00000371173|ZBP1', 'nc|ENSG00000124256|Q9H171-2|ZBP1'] 119285 12127 VELKPHDVR True PC9_epitope_Rep2 1091.60874234351 1091.60764993586 51.956 2 -1.1675802312913197 0.3549518630209582 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 76227 8751 NRYRWLLI True NCI_RA007_Epitope_Rep5 1132.6505475858398 1132.64944993586 40.327 2 -1.1675953385374118 0.3549518630209582 1.0 ['ENST00000261667.7_1_13:50285049-50285109:-|nuORF'] 122148 17689 VGRIHRHL True NCI_RA007_Epitope_Rep5 986.5886160356199 986.5880649679301 74.822 1 -1.167660013891885 0.3549636620571313 1.0 ['ENSG00000164032|ENST00000296417|H2AZ1', 'ENST00000511319.5_1_4:100869621-100871200:-|nuORF', 'nc|ENSG00000105968|Q71UI9-2|H2AZ2', 'ENSG00000105968|ENST00000308153|H2AZ2', 'nc|ENSG00000105968|Q71UI9-5|H2AZ2', 'nc|ENSG00000105968|Q71UI9-4|H2AZ2', 'ENST00000511203.1_1_4:100869836-100870579:-|nuORF', 'ENST00000511348.1_1_4:100870420-100870579:-|nuORF'] 122421 6884 VGSITETL True PC9_epitope_Rep6 818.43854870058 818.43744993586 35.381 2 -1.1676750926424644 0.3549636620571313 1.0 ['nc|ENSG00000126500|Q9NZU1-1|FLRT1', 'ENSG00000126500|ENST00000682287|FLRT1'] 10788 5428 DAAPTVDLNRV True H1975_Epitope_Rep3 1169.60405088589 1169.6029499358601 25.938 2 -1.167720967075895 0.3549636620571313 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630', 'ENSG00000094796|ENST00000251645|KRT31', 'CON__Q9UE12', 'CON__Q15323'] 18848 8972 ELEEYRREVER True PC9_epitope_Rep2 1506.7426696170198 1506.74156993586 39.866 2 -1.167771119798557 0.3550096521442901 1.0 ['nc|ENSG00000087274|P35611-2|ADD1', 'nc|ENSG00000087274|P35611-6|ADD1', 'nc|ENSG00000087274|P35611|ADD1', 'nc|ENSG00000087274|P35611-3|ADD1', 'nc|ENSG00000087274|P35611-4|ADD1', 'ENSG00000087274|ENST00000683351|ADD1', 'ENST00000513762.2_1_4:2911056-2928400:+|nuORF'] 79885 14964 PILKGVGF True PC9_epitope_Rep4 829.5061747679299 829.50506993586 65.497 2 -1.1678554721814898 0.3550430240480456 1.0 ['SLC6A3|p.Q503Sfs*9|1|0.32|ENSG00000142319|chr5:1406281-1406281|C/-|frameshift_variant', 'ENSG00000142319|ENST00000270349|SLC6A3'] 20246 5284 ENWRIFREEQN True PC9_epitope_Rep3 1519.71678922235 1519.7151449037901 25.404 3 -1.1679495355834586 0.3550511613823036 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 83510 9059 QDIWVVRDK True H1975_Epitope_Rep2 1157.61930702721 1157.61820993586 39.799 2 -1.167988477133396 0.3550845319202624 1.0 ['nc|ENSG00000155636|Q8IUH3-2|RBM45', 'ENST00000424000.6_1_2:178977216-178988379:+|nuORF', 'RBM45|p.A384Lfs*7|1|0.37|ENSG00000155636|chr2:178124193-178124193|A/-|frameshift_variant', 'ENSG00000155636|ENST00000286070|RBM45', 'nc|ENSG00000155636|Q8IUH3|RBM45'] 71452 23376 MIVKIKRIRR True PC9_epitope_Rep1 1311.8649145398697 1311.8638099358602 94.695 2 -1.1681048057823253 0.35509266852550436 1.0 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000495254.5_1_1:79119932-79128426:+|nuORF', 'ENST00000485662.1_1_1:79125005-79128426:+|nuORF', 'nc|ENSG00000137965|Q8TCB0-2|IFI44'] 42552 7512 IESLRVPG True PC9_epitope_Rep1 869.49706663621 869.49596993586 33.714 2 -1.1682075353025532 0.35510080492543716 1.0 ['ENSG00000004766|ENST00000305866|VPS50', 'VPS50|p.S583Vfs*7|1|0.23|ENSG00000004766|chr7:93308938-93308938|A/-|frameshift_variant', 'VPS50|p.K778Nfs*7|1|0.13|ENSG00000004766|chr7:93349900-93349900|G/-|frameshift_variant', 'ENST00000477935.1_1_7:92861780-92886786:+|nuORF', 'ENST00000485994.5_1_7:92861780-92886786:+|nuORF', 'nc|ENSG00000004766|Q96JG6-2|VPS50'] 62575 4508 LLTWEHTFPF True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 22.363 3 -1.1682682475924657 0.35512969317723053 1.0 ['ENST00000397086.6_2_16:2303455-2303809:-|nuORF'] 133860 3497 WMCLAAAL True PC9_epitope_Rep4 877.4190166396498 877.41790993586 19.526 2 -1.1682897803012668 0.35512969317723053 1.0 ['ENST00000524501.1_1_11:89867926-89868807:+|nuORF', 'nc|ENSG00000077616|Q9Y3Q0-2|NAALAD2', 'ENSG00000077616|ENST00000534061|NAALAD2'] 23199 10954 EVQALVRKIDA True H1975_Epitope_Rep3 1240.71393568804 1240.71282993586 47.223 2 -1.168366149862276 0.3551504447107803 1.0 ['nc|ENSG00000188487|Q1MX18-6|INSC', 'nc|ENSG00000188487|Q1MX18-4|INSC', 'ENSG00000188487|ENST00000379556|INSC', 'nc|ENSG00000188487|Q1MX18|INSC'] 59050 12540 LGCWFYSSRFP True PC9_epitope_Rep1 1361.6226781554901 1361.6215899358601 53.105 2 -1.1684025813859944 0.35515727871250913 1.0 ['ENST00000457307.1_1_20:43994210-43995752:+|nuORF', 'ENSG00000204070|ENST00000243918|SYS1'] 3034 10302 AFTTEDYDM True PC9_epitope_Rep5 1091.4117418993899 1091.4106499358602 44.614 2 -1.1684033609654085 0.35515727871250913 1.0 ['ENSG00000170348|ENST00000303575|TMED10', 'ENST00000534816.1_1_8:146220430-146220868:+|nuORF'] 83631 21054 QDYIRTFCS True H1975_Epitope_Rep2 1131.50189431647 1131.50023490379 87.15 3 -1.1684106065812259 0.35515727871250913 1.0 ['nc|ENSG00000068784|Q8N5C6-2|SRBD1', 'ENSG00000068784|ENST00000263736|SRBD1'] 44841 12062 IPWYQSMFNWN True H1975_Epitope_Rep3 1484.6547065597597 1484.65360993586 51.558 2 -1.1684344681651824 0.35515727871250913 1.0 ['nc|ENSG807|P61550|ERVS71-1'] 77 6250 AAAKGRLN True PC9_epitope_Rep1 799.46643521427 799.46532993586 28.854 2 -1.1684555772003202 0.35515727871250913 1.0 ['nc|ENSG00000100227|Q9BY77-2|POLDIP3', 'ENSG00000100227|ENST00000252115|POLDIP3', 'POLDIP3|p.R13S|1|0.24|ENSG00000100227|chr22:42614821-42614821|G/T|missense_variant'] 118680 18407 VEARRWLRQAR True H1975_Epitope_Rep1 1439.82219778075 1439.82110993586 76.714 2 -1.1685006678534637 0.35515727871250913 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'nc|ENSG00000151835|Q9NZJ4-2|SACS'] 56963 10091 LEDWRLMHEGA True NCI_RA007_Epitope_Rep1 1355.62922008791 1355.6281299358602 43.261 2 -1.1685402950999708 0.35515727871250913 1.0 ['ENST00000496522.5_1_9:90113545-90113932:+|nuORF'] 98125 16637 SIARTLRT True NCI_RA007_Epitope_Rep5 916.54541381096 916.54430993586 70.76 2 -1.1685415460528572 0.35515727871250913 1.0 ['ENSG00000181035|ENST00000318596|SLC25A42'] 4513 6107 AKMEQMKKK True H1975_Epitope_Rep3 1120.60967094364 1120.60856993586 28.502 2 -1.1685793852836575 0.35515727871250913 1.0 ['ANKRD30A|p.G987A|1|0.19|ENSG00000148513|chr10:37216271-37216271|G/C|missense_variant'] 24294 8648 FAAQAQLLADR True PC9_epitope_Rep6 1202.64077074778 1202.6396699358602 43.09 2 -1.1686525780341737 0.35515727871250913 1.0 97430 21976 SGGGGGGGGD True NCI_RA007_Epitope_Rep4 676.24124587636 676.24069496793 95.293 1 -1.1686777165770141 0.35515727871250913 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1'] 19873 11238 ELVRNGDEEN True PC9_epitope_Rep1 1173.5261944880097 1173.52508993586 48.106 2 -1.1687198027378727 0.35515727871250913 1.0 ['ENSG00000003756|ENST00000347869|RBM5', 'ENST00000475590.5_1_3:50151466-50154632:+|nuORF'] 68113 14995 LTPEMLMR True PC9_epitope_Rep1 989.5038088927699 989.50270993586 62.498 2 -1.1687313282026943 0.35515727871250913 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 42835 22608 IFLIFAMP True PC9_epitope_Rep2 950.52994698762 950.52884993586 92.462 2 -1.1687389099629033 0.35515727871250913 1.0 ['MAS1|p.Y252*|1|0.16|ENSG00000130368|chr6:159907709-159907710|TA/-|frameshift_variant', 'ENSG00000130368|ENST00000674077|MAS1'] 139717 5798 YTVTDQSPRL True PC9_epitope_Rep5 1178.59315184902 1178.59150490379 27.296 3 -1.1688101957668466 0.35515727871250913 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 14371 9189 DTEKLKMYHSL True NCI_RA007_Epitope_Rep1 1363.68058695443 1363.6794899358601 39.745 2 -1.168820689485232 0.35515727871250913 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 20294 10565 EPANPRLGLP True PC9_epitope_Rep1 1062.5821932425 1062.58108993586 45.529 2 -1.1688307764120491 0.35515727871250913 1.0 ['ENSG00000253304|ENST00000521452|TMEM200B'] 99044 15902 SKTSGKAK True NCI_RA007_Epitope_Rep1 805.4657665079299 805.46466993586 65.955 2 -1.1688371578537404 0.35515727871250913 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 25356 17960 FEGLESLVKL True PC9_epitope_Rep6 1133.63322575585 1133.6321299358601 81.711 2 -1.1688633991848094 0.35515727871250913 1.0 ['ENSG00000255690|ENST00000539664|TRIL'] 77044 6673 NVWRFPYLCY True H1975_Epitope_Rep1 1359.6434136000698 1359.64230993586 30.72 2 -1.1688879823613978 0.35515727871250913 1.0 ['nc|ENSG00000010379|Q9NSD5-2|SLC6A13', 'ENSG00000010379|ENST00000343164|SLC6A13', 'ENST00000489764.1_1_1:44476359-44489988:-|nuORF', 'nc|ENSG00000010379|Q9NSD5-3|SLC6A13', 'nc|ENSG00000132164|P48066-2|SLC6A11', 'SLC6A12|p.Q299Rfs*4|2|0.32|ENSG00000111181|chr12:197955-197955|G/-|frameshift_variant', 'SLC6A2|p.C339Lfs*33|1|0.41|ENSG00000103546|chr16:55694104-55694105|-/C|frameshift_variant', 'SLC6A11|p.S591Afs*4|1|0.17|ENSG00000132164|chr3:10938269-10938269|C/-|frameshift_variant', 'ENSG00000103546|ENST00000568943|SLC6A2', 'nc|ENSG00000103546|P23975-2|SLC6A2', 'SLC6A12|p.P564Sfs*13|1|0.14|ENSG00000111181|chr12:192490-192491|-/C|frameshift_variant', 'ENSG00000111181|ENST00000684302|SLC6A12', 'ENSG00000130821|ENST00000253122|SLC6A8', 'ENST00000476466.1_1_X:152954203-152956038:+|nuORF', 'ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6', 'SLC6A6|p.L206Cfs*11|1|0.18|ENSG00000131389|chr3:14457966-14457966|T/-|frameshift_variant', 'ENSG00000132164|ENST00000254488|SLC6A11', 'SLC6A3|p.Q503Sfs*9|1|0.32|ENSG00000142319|chr5:1406281-1406281|C/-|frameshift_variant', 'ENSG00000142319|ENST00000270349|SLC6A3', 'ENSG00000196517|ENST00000372310|SLC6A9', 'nc|ENSG00000196517|P48067-3|SLC6A9', 'nc|ENSG00000196517|P48067|SLC6A9'] 36869 19510 GVQDALNI True PC9_epitope_Rep6 828.43413202648 828.4335849679301 87.707 1 -1.1689076903659763 0.35515727871250913 1.0 ['ENSG00000183576|ENST00000331768|SETD3'] 128172 20497 VRSPGGKLK True NCI_RA007_Epitope_Rep4 940.5817993196799 940.58070993586 88.757 2 -1.16893473677716 0.355165411732062 1.0 ['ENST00000265198.8_1_6:154567882-154587062:-|nuORF', 'ENST00000422970.6_1_6:154567882-154587062:-|nuORF', 'ENST00000519344.5_1_6:154567882-154568747:-|nuORF'] 69782 4678 LWRGRWRWWEH True NCI_RA007_Epitope_Rep2 1666.8381821980597 1666.8365249037902 22.823 3 -1.169005795029322 0.35517354454646355 1.0 ['ENST00000361226.7_1_9:35546604-35546643:+|nuORF'] 92686 20619 RRGSRPRKIVD True NCI_RA007_Epitope_Rep5 1338.79564867974 1338.79399490379 86.252 3 -1.1690640472499119 0.35519628737531056 1.0 ['nc|ENSG00000049449|Q15293-2|RCN1'] 29483 10485 FVIFC[Carbamidomethyl]PEPGQK True NCI_RA007_Epitope_Rep2 1320.6536442100298 1320.6525499358602 45.377 2 -1.1690763381787244 0.35519628737531056 1.0 ['ENSG00000105849|ENST00000222567|POLR1F'] 59625 5158 LGSISPPK True NCI_RA007_Epitope_Rep4 797.46470387877 797.46360993586 26.365 2 -1.169147177248831 0.35519628737531056 1.0 ['ENST00000368357.7_1_6:126249952-126250054:+|nuORF'] 469 7384 AAMMLAVATV True PC9_epitope_Rep3 976.5085599200398 976.50746993586 33.412 2 -1.169154274131122 0.35519628737531056 1.0 ['ENST00000360830.8_1_10:79797061-79800436:+|nuORF', 'ENST00000372360.7_1_10:79797030-79800436:+|nuORF'] 78253 19773 PARFLPLPGL True PC9_epitope_Rep4 1079.6491506035097 1079.6480499358602 84.182 2 -1.169174558681545 0.35519628737531056 1.0 ['ENSG00000105550|ENST00000593756|FGF21'] 45541 10467 ISFYSFFSNLP True H1975_Epitope_Rep3 1320.6390394122798 1320.6379499358602 45.323 2 -1.1692197450138464 0.35519628737531056 1.0 ['chr6:45020632-45062708|281|10.85|0.01|10.56|-|1|TE_info:L1PA2,L1PA2_dup1868,L1,LINE,donor,+,45062708,45068476|SUPT3H,None|105'] 30991 16651 GATLPRVRAS True NCI_RA007_Epitope_Rep5 1026.5934266325398 1026.59232993586 70.814 2 -1.169240004212659 0.35519628737531056 1.0 ['ENST00000332281.5_1_16:88744440-88744848:-|nuORF'] 16596 5126 EERQQWESRER True H1975_Epitope_Rep1 1531.7127664710695 1531.71166993586 24.787 2 -1.1692452673484246 0.35519628737531056 1.0 ['DNAAF1|p.L683Sfs*5|1|0.19|ENSG00000154099|chr16:84176277-84176290|CTTCCTTGCAGCCT/-|frameshift_variant', 'ENSG00000154099|ENST00000378553|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-3|DNAAF1', 'nc|ENSG00000154099|Q8NEP3-2|DNAAF1'] 5358 4989 ALTEEMKLASQ True NCI_RA007_Epitope_Rep1 1219.61183868827 1219.61020490379 23.489 3 -1.1692501580741934 0.35519628737531056 1.0 ['nc|ENSG00000162869|Q6ZMI0-5|PPP1R21', 'nc|ENSG00000162869|Q6ZMI0-2|PPP1R21', 'ENSG00000162869|ENST00000294952|PPP1R21'] 122491 11955 VGSRGFAR True NCI_RA007_Epitope_Rep3 848.4616841869998 848.46058993586 54.15 2 -1.1692993250389647 0.3552296400918056 1.0 ['ENST00000355221.7_3_8:54745628-54755835:-|nuORF'] 51927 17077 KKSQSRPL True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 75.04 2 -1.16944112299001 0.35529634300126106 1.0 ['ENSG00000152749|ENST00000376958|GPR180'] 30432 8880 GAGALPEAA True NCI_RA007_Epitope_Rep3 755.38136817763 755.3808149679301 42.019 1 -1.1694613193957253 0.35529634300126106 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 122388 14003 VGSGFPLP True PC9_epitope_Rep1 772.41194002992 772.41084993586 58.7 2 -1.169471051875055 0.35530447283136407 1.0 ['ENSG00000170903|ENST00000301919|MSANTD4'] 13724 8925 DQIRQSVRHSL True H1975_Epitope_Rep1 1337.71639529953 1337.71528993586 39.235 2 -1.1695020026460843 0.35531260245643237 1.0 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3'] 99394 8075 SLEDKAQLLPG True PC9_epitope_Rep5 1169.6292030045697 1169.6275649037902 35.999 3 -1.169537066242327 0.3553207318764738 1.0 ['ENST00000375068.5_1_X:54834175-54835798:+|nuORF'] 18255 15950 EISPWCYTM True PC9_epitope_Rep1 1128.46200365044 1128.4609099358602 66.161 2 -1.1695479899483627 0.35532438055608095 1.0 ['ENSG00000198670|ENST00000316300|LPA'] 81084 4840 PPFLHLLG True PC9_epitope_Rep1 892.5170738047999 892.51596993586 23.486 2 -1.169555648170182 0.35532438055608095 1.0 ['SYNPO2|p.I1101Ffs*22|2|0.25|ENSG00000172403|chr4:119057443-119057443|C/-|frameshift_variant'] 58056 10501 LERLLTWQGDP True H1975_Epitope_Rep3 1326.6932002434598 1326.6921099358601 45.456 2 -1.1695907644874248 0.35533250952008677 1.0 ['ENSG00000204839|ENST00000398882|MROH6'] 23087 20039 EVLKSITV True PC9_epitope_Rep1 887.53278343859 887.53168993586 81.908 2 -1.1697172323715455 0.3554036844162558 1.0 ['ENSG00000178409|ENST00000369042|BEND3', 'BEND3|p.E692Rfs*21|1|0.12|ENSG00000178409|chr6:107069117-107069118|-/G|frameshift_variant'] 110546 15324 TIRPVKGP True PC9_epitope_Rep1 866.5337864980999 866.53268993586 63.763 2 -1.1698699041118723 0.3554650561698587 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant'] 109369 9474 TGKEFALK True NCI_RA007_Epitope_Rep4 892.5018176634799 892.50072993586 43.298 2 -1.1699856554856687 0.3554650561698587 1.0 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 36254 15291 GVGGRKPH True NCI_RA007_Epitope_Rep4 806.4511195032999 806.45057496793 66.471 1 -1.1699893812316098 0.3554650561698587 1.0 ['ENST00000520083.1_1_9:36923038-36923170:-|nuORF'] 63678 13533 LPPQLPTRDF True PC9_epitope_Rep1 1182.6397081186199 1182.63805490379 56.91 3 -1.1699921124528465 0.3554650561698587 1.0 ['ENST00000534042.5_1_11:34073366-34093277:+|nuORF', 'ENST00000341394.8_1_11:34073366-34074044:+|nuORF'] 128671 9286 VSLTWEEWERL True H1975_Epitope_Rep1 1446.71432961086 1446.71269490379 40.63 3 -1.170053623433893 0.3554650561698587 1.0 ['ENSG00000160908|ENST00000337673|ZNF394', 'ENST00000481881.1_1_7:99096270-99097704:-|nuORF'] 121953 22504 VGPRRKLNEI True PC9_epitope_Rep5 1180.70403971068 1180.70294993586 91.566 2 -1.170054502300506 0.3554650561698587 1.0 ['ENST00000586695.1_1_18:77287338-77287574:+|nuORF'] 88470 21142 QYWTKWLLRLE True H1975_Epitope_Rep1 1534.8296341466196 1534.8285299358602 87.83 2 -1.170072306694403 0.35546786353664994 1.0 ['ENSG00000125871|ENST00000377710|MGME1'] 92617 16054 RRERKSFK True NCI_RA007_Epitope_Rep4 1105.64685918773 1105.64576993586 69.629 2 -1.1700787631391463 0.35546786353664994 1.0 ['ENST00000560834.1_1_15:44751212-44776450:+|nuORF'] 15250 14408 EAGKQEELIK True PC9_epitope_Rep6 1143.6135529404298 1143.61244993586 67.317 2 -1.1700895187117526 0.35546786353664994 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'chr3:172754660-172755298|495|20.93|0.9|4.54|+|ENST00000428567|ECT2,ECT2', 'nc|ENSG00000114346|Q9H8V3-4|ECT2', 'ECT2|p.S891Pfs*16|1|0.33|ENSG00000114346|chr3:172820160-172820160|C/-|frameshift_variant', 'ENSG00000114346|ENST00000392692|ECT2', 'nc|ENSG00000114346|Q9H8V3-3|ECT2', 'nc|ENSG00000114346|Q9H8V3-2|ECT2'] 27769 17105 FQEEGTEPQR True PC9_epitope_Rep5 1219.5469299325898 1219.5458299358602 70.816 2 -1.1700899878855664 0.35546786353664994 1.0 ['ENST00000506646.5_1_4:431247-432385:-|nuORF'] 90083 25088 RGPVITALT True PC9_epitope_Rep1 926.5549158655 926.55380993586 101.39 2 -1.1701169718438207 0.35546786353664994 1.0 ['nc|ENSG00000196365|P36776-2|LONP1'] 131101 5005 VVMRYLFA True NCI_RA007_Epitope_Rep3 997.5419086536499 997.54080993586 26.683 2 -1.170124652615127 0.3554759893594221 1.0 ['ENSG00000196220|ENST00000383836|SRGAP3', 'nc|ENSG00000196220|O43295-2|SRGAP3', 'SRGAP3|p.V850Gfs*10|1|0.11|ENSG00000196220|chr3:8992915-8992916|-/C|frameshift_variant'] 5514 17742 ANARERARMSV True NCI_RA007_Epitope_Rep4 1259.65168686799 1259.6505899358601 76.801 2 -1.1701406061946218 0.3554841149773071 1.0 ['MSC|p.R121S|1|0.26|ENSG00000178860|chr8:71843818-71843818|G/T|missense_variant'] 60400 15186 LIIRRLHKV True H1975_Epitope_Rep2 1146.77133142486 1146.76969490379 63.57 3 -1.1702839689758444 0.35551745439417054 1.0 ['ENST00000591595.5_1_19:11130023-11172489:+|nuORF', 'ENST00000585799.5_1_19:11132109-11172489:+|nuORF', 'nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'ENST00000592604.5_1_19:11123597-11172489:+|nuORF', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant'] 22615 10294 ETQEHPPIS True PC9_epitope_Rep3 1036.48253877088 1036.4814499358602 44.544 2 -1.170422011460147 0.3555463106539087 1.0 ['ENST00000264246.7_1_3:119276682-119276772:-|nuORF'] 138708 16394 YRVHFLLERLQ True H1975_Epitope_Rep1 1472.8252174725199 1472.8241299358601 68.418 2 -1.1704836257204603 0.3555463106539087 1.0 ['ENSG00000135966|ENST00000393359|TGFBRAP1'] 88699 20410 RCMCPFQV True PC9_epitope_Rep4 982.4186993698198 982.41760993586 86.653 2 -1.1705109921312389 0.35555443497554334 1.0 ['ENST00000367608.6_1_6:142688909-142691321:+|nuORF'] 79502 11177 PGQDRTLQL True PC9_epitope_Rep5 1026.5458077337798 1026.54470993586 47.981 2 -1.170562305280244 0.35555807679701484 1.0 ['ENST00000561643.5_1_15:75646668-75647372:+|nuORF'] 104587 13548 SSSSSSSS True PC9_epitope_Rep4 714.2667919178601 714.2662449679301 60.007 1 -1.170570481627682 0.35555807679701484 1.0 ['DIP2B|p.N772Kfs*4|1|0.24|ENSG00000066084|chr12:50699186-50699187|-/A|frameshift_variant', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'GLCCI1|p.Q349Pfs*79|1|0.27|ENSG00000106415|chr7:8070998-8070999|-/CC|frameshift_variant', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000158458|O14511-6|NRG2', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENSG00000070423|ENST00000292363|RNF126', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000196581|ENST00000378191|AJAP1', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000158458|O14511-2|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000173706|ENST00000311127|HEG1', 'ENSG00000150361|ENST00000377844|KLHL1', 'KMT2A|p.S90L|1|0.13|ENSG00000118058|chr11:118436781-118436781|C/T|missense_variant', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000185737|ENST00000372141|NRG3', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000102755|P17948-3|FLT1', 'ENSG00000170166|ENST00000306324|HOXD4', 'ZFC3H1|p.G70C|1|0.1|ENSG00000133858|chr12:71663403-71663403|C/A|missense_variant', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'SP4|p.G133R|2|0.76|ENSG00000105866|chr7:21429562-21429562|G/C|missense_variant', 'SALL1|p.G161S|1|0.17|ENSG00000103449|chr16:51141741-51141741|C/T|missense_variant', 'RLIM|p.S467Y|1|0.15|ENSG00000131263|chrX:74591915-74591915|G/T|missense_variant', 'ZC3H3|p.A872S|1|0.28|ENSG00000014164|chr8:143440242-143440242|C/A|missense_variant', 'chrX:152136080-152136871|180|19.49|0.03|9.2|-|ENST00000583480|MAGEA10,MAGEA10', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'PHLPP2|p.Y110Lfs*8|1|0.66|ENSG00000040199|chr16:71702687-71702688|-/A|frameshift_variant', 'chrX:152135834-152135990|168|18.08|0.03|9.41|-|ENST00000427322|MAGEA10,MAGEA10', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'ZFC3H1|p.I881Ffs*9|2|0.18|ENSG00000133858|chr12:71633308-71633308|T/-|frameshift_variant', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'GPHN-DCAF5|1|fusion', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ATXN7|p.K789Qfs*11|1|0.27|ENSG00000163635|chr3:63996184-63996185|-/T|frameshift_variant', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'ENSG00000144218|ENST00000672756|AFF3', 'nc|ENSG00000144218|P51826-2|AFF3', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'KCNMA1|p.E329Kfs*60|1|0.17|ENSG00000156113|chr10:77110319-77110319|C/-|frameshift_variant', 'ENSG00000168772|ENST00000394767|CXXC4', 'ENSG00000275023|ENST00000621332|MLLT6', 'MLLT6|p.K443Tfs*11|1|0.35|ENSG00000275023|chr17:38716658-38716665|AACGGATG/-|frameshift_variant', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'JCAD|p.A1030Qfs*35|1|0.16|ENSG00000165757|chr10:30027060-30027060|C/-|frameshift_variant', 'ENSG00000165757|ENST00000375377|JCAD', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000108312|ENST00000436088|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'PPIG-FAM117B|1|fusion', 'nc|ENSG00000138398|Q13427-2|PPIG', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000105722|P50548-2|ERF', 'PPIG|p.A682Gfs*2|1|0.15|ENSG00000138398|chr2:169637293-169637294|-/A|frameshift_variant', 'ENSG00000138398|ENST00000260970|PPIG', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|196|11.33|0.52|4.43|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENSG00000105866|ENST00000222584|SP4', 'ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000169291|ENST00000304760|SHE', 'ENSG00000116690|ENST00000445192|PRG4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'FAM133A|p.C102F|1|0.22|ENSG00000179083|chrX:93709724-93709724|G/T|missense_variant'] 45554 5990 ISGHRASPNP True H1975_Epitope_Rep2 1034.52574099554 1034.52464993586 28.019 2 -1.1706503556941965 0.35557880671146014 1.0 ['nc|ENSG00000136715|Q9H0E3|SAP130', 'ENSG00000136715|ENST00000643581|SAP130', 'nc|ENSG00000136715|Q9H0E3-3|SAP130'] 59553 10590 LGRDFLLRNDP True H1975_Epitope_Rep3 1314.7044336334998 1314.7033299358602 45.804 2 -1.1706734478641019 0.3555816064135532 1.0 ['ENSG00000158321|ENST00000342771|AUTS2', 'nc|ENSG00000158321|Q8WXX7-2|AUTS2', 'nc|ENSG00000158321|Q8WXX7-5|AUTS2'] 67871 6217 LTKGQVGG True PC9_epitope_Rep2 758.4286527232199 758.42754993586 29.311 2 -1.170679625338346 0.3555816064135532 1.0 ['ENSG00000014138|ENST00000265465|POLA2'] 41963 16624 IEDDIESLHT True H1975_Epitope_Rep2 1170.54044756982 1170.5393499358602 69.176 2 -1.1706871912162717 0.3555816064135532 1.0 ['ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'ENST00000511274.1_1_4:73163985-73176842:-|nuORF'] 64728 23517 LRQHKESL True PC9_epitope_Rep1 1009.5668775315299 1009.56578993586 95.245 2 -1.1706886279821611 0.3555816064135532 1.0 ['nc|ENSG00000231852|P08686-2|CYP21A2', 'ENSG00000231852|ENST00000644719|CYP21A2'] 93108 23092 RRRPRLLRRR True NCI_RA007_Epitope_Rep4 1433.9392336520098 1433.9381299358602 100.27 2 -1.1706887814490246 0.3555816064135532 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 60733 7270 LKALQGPLFW True NCI_RA007_Epitope_Rep4 1171.67536535135 1171.67371490379 34.599 3 -1.1707439600385299 0.35558188188440504 1.0 ['ENSG00000175398|ENST00000309675|OR10P1', 'OR10P1|p.V30G|1|0.18|ENSG00000175398|chr12:55636980-55636980|T/G|missense_variant'] 11139 7892 DEETQYQTAVE True H1975_Epitope_Rep1 1311.5466551490701 1311.5455499358602 35.308 2 -1.170768837237334 0.35558188188440504 1.0 ['ENSG00000134758|ENST00000261593|RNF138', 'nc|ENSG00000134758|Q8WVD3-2|RNF138'] 77650 11987 NYYSTLSFT True PC9_epitope_Rep1 1094.49204082542 1094.49094993586 50.971 2 -1.1708119313766625 0.35558188188440504 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 122994 10786 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 46.45 2 -1.1708792426072379 0.35558188188440504 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 99990 9177 SLISWWLPESA True PC9_epitope_Rep1 1287.64993844915 1287.6488499358602 40.149 2 -1.170916601113688 0.35558188188440504 1.0 ['ENSG00000168065|ENST00000301891|SLC22A11', 'nc|ENSG00000168065|Q9NSA0-2|SLC22A11'] 7709 9250 ASQQQVEVYKI True NCI_RA007_Epitope_Rep2 1291.67721582615 1291.67610993586 40.589 2 -1.1709167638560838 0.35558188188440504 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 271 3856 AAGSDLGRGF True NCI_RA007_Epitope_Rep4 949.4617437566499 949.46064993586 21.036 2 -1.1709176315441803 0.35558188188440504 1.0 ['ENSG00000254470|ENST00000532090|AP5B1'] 12055 8197 DIDVSGPS True PC9_epitope_Rep6 788.35521299944 788.35466496793 41.102 1 -1.1709943917616685 0.35558188188440504 1.0 ['ENSG00000124942|ENST00000378024|AHNAK', 'AHNAK|p.P3736Qfs*5|1|0.25|ENSG00000124942|chr11:62523210-62523210|G/-|frameshift_variant', 'AHNAK|p.K2299Sfs*23|1|0.39|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant', 'AHNAK|p.V2494Lfs*3|1|0.58|ENSG00000124942|chr11:62526941-62526941|G/-|frameshift_variant', 'AHNAK|p.D1939Gfs*24|1|0.16|ENSG00000124942|chr11:62528601-62528602|-/C|frameshift_variant'] 22682 7456 ETTLVVYIMT True PC9_epitope_Rep2 1168.6049624026798 1168.60386993586 34.054 2 -1.1709960854945118 0.35558188188440504 1.0 ['ENSG00000119686|ENST00000238667|FLVCR2', 'nc|ENSG00000119686|Q9UPI3-2|FLVCR2'] 118870 15621 VEELPAERL True PC9_epitope_Rep1 1054.56587447202 1054.56476993586 64.905 2 -1.1710272020045007 0.35558188188440504 1.0 ['ENSG00000167676|ENST00000301286|PLIN4'] 104588 13642 SSSSSSSS True PC9_epitope_Rep4 714.2667919178601 714.2662449679301 60.366 1 -1.1710282070144824 0.35558188188440504 1.0 ['DIP2B|p.N772Kfs*4|1|0.24|ENSG00000066084|chr12:50699186-50699187|-/A|frameshift_variant', 'nc|ENSG00000292373|Q01113-2|IL9R', 'ENSG00000124334|ENST00000244174|IL9R', 'ENSG00000106415|ENST00000223145|GLCCI1', 'GLCCI1|p.Q349Pfs*79|1|0.27|ENSG00000106415|chr7:8070998-8070999|-/CC|frameshift_variant', 'nc|ENSG00000158458|O14511-5|NRG2', 'ENSG00000130751|ENST00000602212|NPAS1', 'ENSG00000237452|ENST00000457052|MEIOSIN', 'nc|ENSG00000158458|O14511-6|NRG2', 'ENSG00000071243|ENST00000315870|ING3', 'nc|ENSG00000182196|Q66PJ3-2|ARL6IP4', 'ENSG00000180828|ENST00000321870|BHLHE22', 'ENSG00000070423|ENST00000292363|RNF126', 'nc|ENSG00000014164|Q8IXZ2-2|ZC3H3', 'ENST00000506955.5_1_5:176959168-176966109:-|nuORF', 'nc|ENSG00000167674|Q7Z4V5-4|HDGFL2', 'nc|ENSG00000182196|Q66PJ3-4|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-3|ARL6IP4', 'ENST00000549620.5_1_12:50898851-51072694:+|nuORF', 'ENSG00000196581|ENST00000378191|AJAP1', 'nc|ENSG00000167674|Q7Z4V5-2|HDGFL2', 'ENSG00000167674|ENST00000616600|HDGFL2', 'nc|ENSG00000158458|O14511-2|NRG2', 'nc|ENSG00000158458|O14511-4|NRG2', 'nc|ENSG00000158458|O14511-3|NRG2', 'nc|ENSG00000137948|Q58F21-5|BRDT', 'nc|ENSG00000137948|Q58F21-4|BRDT', 'nc|ENSG00000146067|Q96PV7|FAM193B', 'nc|ENSG00000107957|Q5TCZ1-2|SH3PXD2A', 'nc|ENSG00000137948|Q58F21-3|BRDT', 'ENSG00000158458|ENST00000361474|NRG2', 'nc|ENSG00000137948|Q58F21-2|BRDT', 'nc|ENSG00000173706|Q9ULI3-2|HEG1', 'ENSG00000121297|ENST00000240587|TSHZ3', 'ENSG00000173706|ENST00000311127|HEG1', 'ENSG00000150361|ENST00000377844|KLHL1', 'KMT2A|p.S90L|1|0.13|ENSG00000118058|chr11:118436781-118436781|C/T|missense_variant', 'nc|ENSG00000185737|P56975-2|NRG3', 'nc|ENSG00000167674|Q7Z4V5-3|HDGFL2', 'ENSG00000185737|ENST00000372141|NRG3', 'ENSG00000137948|ENST00000399546|BRDT', 'ENSG00000146067|ENST00000514747|FAM193B', 'nc|ENSG00000185737|P56975|NRG3', 'nc|ENSG00000102755|P17948-3|FLT1', 'ENSG00000170166|ENST00000306324|HOXD4', 'ZFC3H1|p.G70C|1|0.1|ENSG00000133858|chr12:71663403-71663403|C/A|missense_variant', 'ENST00000468201.1_1_7:39663168-39736294:+|nuORF', 'ENST00000481622.1_1_3:23848730-23850221:+|nuORF', 'ENST00000442459.2_1_1:16344254-16344485:-|nuORF', 'ENST00000486086.1_1_7:74015315-74016757:+|nuORF', 'ENST00000382004.7_1_9:3395523-3525870:-|nuORF', 'ENST00000600352.1_1_19:47539221-47542747:+|nuORF', 'ENST00000354527.2_1_10:89382156-89419752:-|nuORF', 'ENST00000474766.1_1_1:36787341-36788202:+|nuORF', 'nc|ENSG00000205352|Q9NZ81-2|PRR13', 'ENST00000389010.7_1_4:79791948-79793049:+|nuORF', 'ENST00000513541.5_1_5:132334277-132335876:-|nuORF', 'ENST00000005257.6_1_7:39663168-39726237:+|nuORF', 'ENST00000360639.6_1_15:75500494-75500713:+|nuORF', 'nc|ENSG00000130751|Q99742-2|NPAS1', 'SP4|p.G133R|2|0.76|ENSG00000105866|chr7:21429562-21429562|G/C|missense_variant', 'SALL1|p.G161S|1|0.17|ENSG00000103449|chr16:51141741-51141741|C/T|missense_variant', 'RLIM|p.S467Y|1|0.15|ENSG00000131263|chrX:74591915-74591915|G/T|missense_variant', 'ZC3H3|p.A872S|1|0.28|ENSG00000014164|chr8:143440242-143440242|C/A|missense_variant', 'chrX:152136080-152136871|180|19.49|0.03|9.2|-|ENST00000583480|MAGEA10,MAGEA10', 'ENST00000569680.1_1_15:74836266-74836383:+|nuORF', 'ENST00000394166.7_1_15:96874716-96874860:+|nuORF', 'ENST00000590962.1_1_19:38882723-38882985:+|nuORF', 'ENST00000433831.5_1_22:20909408-20918892:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-3|HSPB7', 'ENSG00000155329|ENST00000509437|ZCCHC10', 'nc|ENSG00000168772|Q9H2H0|CXXC4', 'nc|ENSG00000155329|Q8TBK6-2|ZCCHC10', 'ENST00000502973.1_1_4:164079476-164087879:-|nuORF', 'nc|ENSG00000182196|Q66PJ3-5|ARL6IP4', 'ENST00000567228.1_1_16:67229659-67232023:+|nuORF', 'ENST00000484048.1_1_3:23848730-23849168:+|nuORF', 'nc|ENSG00000234545|Q5BKY9-2|FAM133B', 'ENST00000442210.2_1_12:123465790-123467130:+|nuORF', 'nc|ENSG00000088726|Q8WWA1-2|TMEM40', 'nc|ENSG00000182196|Q66PJ3-10|ARL6IP4', 'nc|ENSG00000182196|Q66PJ3-9|ARL6IP4', 'ENSG00000088726|ENST00000314124|TMEM40', 'PHLPP2|p.Y110Lfs*8|1|0.66|ENSG00000040199|chr16:71702687-71702688|-/A|frameshift_variant', 'chrX:152135834-152135990|168|18.08|0.03|9.41|-|ENST00000427322|MAGEA10,MAGEA10', 'ENST00000524717.5_1_11:95825156-95825615:-|nuORF', 'ENST00000300952.6_1_19:1257468-1257951:+|nuORF', 'ENST00000509538.5_1_4:185573199-185578558:+|nuORF', 'ENST00000495141.5_1_3:23848730-23929256:+|nuORF', 'ENST00000603137.1_1_2:28238673-28239105:-|nuORF', 'ENST00000601169.1_1_19:47539221-47543970:+|nuORF', 'ENST00000469132.1_1_6:32947934-32948492:+|nuORF', 'ENSG00000205352|ENST00000429243|PRR13', 'ENST00000573311.1_1_16:2818098-2819286:+|nuORF', 'ENST00000481407.5_1_7:92191598-92207100:-|nuORF', 'ENSG00000234545|ENST00000445716|FAM133B', 'nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1', 'ZFC3H1|p.I881Ffs*9|2|0.18|ENSG00000133858|chr12:71633308-71633308|T/-|frameshift_variant', 'nc|ENSG00000133858|O60293-4|ZFC3H1', 'nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENSG00000165572|ENST00000379485|KBTBD6', 'ENSG00000120696|ENST00000379483|KBTBD7', 'nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'ENST00000574593.1_1_16:2817540-2819884:+|nuORF', 'ENSG00000128714|ENST00000392539|HOXD13', 'HOXD13|p.R277Efs*13|1|0.35|ENSG00000128714|chr2:176094523-176094524|-/G|frameshift_variant', 'nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A', 'ENSG00000236104|ENST00000431845|ZBTB22', 'ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000100941|ENST00000216832|PNN', 'ENSG00000107816|ENST00000454422|LZTS2', 'nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'GPHN-DCAF5|1|fusion', 'ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ATXN7|p.K789Qfs*11|1|0.27|ENSG00000163635|chr3:63996184-63996185|-/T|frameshift_variant', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'ENSG00000144218|ENST00000672756|AFF3', 'nc|ENSG00000144218|P51826-2|AFF3', 'nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'KCNMA1|p.E329Kfs*60|1|0.17|ENSG00000156113|chr10:77110319-77110319|C/-|frameshift_variant', 'ENSG00000168772|ENST00000394767|CXXC4', 'ENSG00000275023|ENST00000621332|MLLT6', 'MLLT6|p.K443Tfs*11|1|0.35|ENSG00000275023|chr17:38716658-38716665|AACGGATG/-|frameshift_variant', 'ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF', 'nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1', 'nc|ENSG00000177200|Q3L8U1-2|CHD9', 'nc|ENSG00000177200|Q3L8U1-3|CHD9', 'ENSG00000177200|ENST00000447540|CHD9', 'JCAD|p.A1030Qfs*35|1|0.16|ENSG00000165757|chr10:30027060-30027060|C/-|frameshift_variant', 'ENSG00000165757|ENST00000375377|JCAD', 'nc|ENSG00000108312|P17480-2|UBTF', 'ENSG00000108312|ENST00000436088|UBTF', 'ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENSG00000182095|ENST00000430969|TNRC18', 'ENSG00000160194|ENST00000354250|NDUFV3', 'ENSG00000163623|ENST00000295886|NKX6-1', 'ENSG00000133193|ENST00000405159|FAM104A', 'nc|ENSG00000133193|Q969W3|VCF1', 'ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3', 'ENSG00000183496|ENST00000329713|MEX3B', 'ENST00000558133.1_1_15:82335503-82336997:-|nuORF', 'ENSG00000012174|ENST00000379484|MBTPS2', 'ENSG00000133030|ENST00000651222|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-3|MPRIP', 'nc|ENSG00000133030|Q6WCQ1|MPRIP', 'nc|ENSG00000133030|Q6WCQ1-2|MPRIP', 'ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'ENSG00000108256|ENST00000225388|NUFIP2', 'ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1', 'ENST00000574951.5_1_17:4872053-4885503:-|nuORF', 'nc|ENSG00000108509|O94983-2|CAMTA2', 'nc|ENSG00000108509|O94983-3|CAMTA2', 'nc|ENSG00000108509|O94983-4|CAMTA2', 'ENSG00000108509|ENST00000348066|CAMTA2', 'nc|ENSG00000108509|O94983-6|CAMTA2', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'ENSG00000176771|ENST00000409261|NCKAP5', 'ENSG00000070495|ENST00000397625|JMJD6', 'nc|ENSG00000070495|Q6NYC1-3|JMJD6', 'nc|ENSG00000070495|Q6NYC1-2|JMJD6', 'ENST00000589982.1_1_17:74714813-74716591:-|nuORF', 'PPIG-FAM117B|1|fusion', 'nc|ENSG00000138398|Q13427-2|PPIG', 'ENSG00000113758|ENST00000393565|DBN1', 'ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B', 'ENSG00000079313|ENST00000170168|REXO1', 'ENSG00000166197|ENST00000605788|NOLC1', 'nc|ENSG00000166197|Q14978-3|NOLC1', 'nc|ENSG00000166197|Q14978-2|NOLC1', 'ENSG00000148840|ENST00000278070|PPRC1', 'nc|ENSG00000148840|Q5VV67-2|PPRC1', 'ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA', 'ENST00000602258.1_1_19:48204415-48205669:+|nuORF', 'nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1', 'ENSG00000165684|ENST00000684778|SNAPC4', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'ENSG00000160741|ENST00000368633|CRTC2', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000204256|P25440-4|BRD2', 'nc|ENSG00000204256|P25440-3|BRD2', 'ENSG00000204256|ENST00000374825|BRD2', 'nc|ENSG00000204256|P25440-2|BRD2', 'ENSG00000014164|ENST00000262577|ZC3H3', 'ENSG00000261221|ENST00000568956|ZNF865', 'ENSG00000157152|ENST00000621198|SYN2', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000105722|P50548-2|ERF', 'PPIG|p.A682Gfs*2|1|0.15|ENSG00000138398|chr2:169637293-169637294|-/A|frameshift_variant', 'ENSG00000138398|ENST00000260970|PPIG', 'ENSG00000131263|ENST00000332687|RLIM', 'nc|ENSG00000131263|Q9NVW2-2|RLIM', 'ENST00000558657.1_1_15:50087131-50087983:+|nuORF', 'ENSG00000138433|ENST00000342016|CIR1', 'nc|ENSG00000158290|Q13620|CUL4B', 'ENSG00000158290|ENST00000371322|CUL4B', 'ENSG00000156860|ENST00000356166|FBRS', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP', 'ENSG00000173894|ENST00000310942|CBX2', 'ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|196|11.33|0.52|4.43|+|ENST00000332647|FAM133A,FAM133A', 'ENSG00000100813|ENST00000605057|ACIN1', 'nc|ENSG00000100813|Q9UKV3-5|ACIN1', 'nc|ENSG00000100813|Q9UKV3|ACIN1', 'nc|ENSG00000106536|P78424-2|POU6F2', 'nc|ENSG00000106536|P78424|POU6F2', 'ENSG00000106536|ENST00000518318|POU6F2', 'ENSG00000145414|ENST00000274054|NAF1', 'ENST00000509232.5_1_4:164057286-164087879:-|nuORF', 'nc|ENSG00000145414|Q96HR8-2|NAF1', 'nc|ENSG00000133226|Q8IYB3-2|SRRM1', 'ENSG00000133226|ENST00000323848|SRRM1', 'ENSG00000174282|ENST00000380599|ZBTB4', 'ENST00000567007.5_1_16:67226831-67232023:+|nuORF', 'ENSG00000205250|ENST00000379378|E2F4', 'ENSG00000006704|ENST00000424337|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9|GTF2IRD1', 'nc|ENSG00000006704|Q9UHL9-3|GTF2IRD1', 'ENST00000602506.5_1_16:67760333-67793575:-|nuORF', 'nc|ENSG00000141084|Q6VN20-2|RANBP10', 'nc|ENSG00000141084|Q6VN20-3|RANBP10', 'ENSG00000141084|ENST00000317506|RANBP10', 'ENSG00000105866|ENST00000222584|SP4', 'ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1', 'ENSG00000082497|ENST00000367012|SERTAD4', 'ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'nc|ENSG00000173641|Q9UBY9-2|HSPB7', 'ENSG00000173641|ENST00000311890|HSPB7', 'nc|ENSG00000170142|P51965-3|UBE2E1', 'ENSG00000170142|ENST00000306627|UBE2E1', 'ENSG00000161940|ENST00000293805|BCL6B', 'ENSG00000169291|ENST00000304760|SHE', 'ENSG00000116690|ENST00000445192|PRG4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2', 'nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4', 'ENSG00000187957|ENST00000341772|DNER', 'nc|ENSG00000185340|Q99501|GAS2L1', 'ENSG00000185340|ENST00000616432|GAS2L1', 'nc|ENSG00000205937|Q15287-3|RNPS1', 'nc|ENSG00000205937|Q15287-2|RNPS1', 'ENSG00000205937|ENST00000320225|RNPS1', 'FAM133A|p.C102F|1|0.22|ENSG00000179083|chrX:93709724-93709724|G/T|missense_variant'] 29946 10459 FWWLSQHQCWL True NCI_RA007_Epitope_Rep5 1532.70232545852 1532.70122993586 46.863 2 -1.1710388242574041 0.35558188188440504 1.0 ['ENST00000420798.6_2_X:54956297-54956465:+|nuORF'] 123432 13317 VIEEKNEL True H1975_Epitope_Rep2 972.5127762699999 972.51166993586 56.354 2 -1.171050164189506 0.35558188188440504 1.0 ['nc|ENSG00000127914|Q99996-5|AKAP9', 'nc|ENSG00000127914|Q99996-3|AKAP9', 'ENSG00000127914|ENST00000356239|AKAP9', 'nc|ENSG00000127914|Q99996-1|AKAP9', 'nc|ENSG00000127914|Q99996-6|AKAP9', 'AKAP9|p.P2964Qfs*4|1|0.24|ENSG00000127914|chr7:92084921-92084921|C/-|frameshift_variant'] 97522 23371 SGRPGPRL True PC9_epitope_Rep4 838.47733425114 838.47622993586 98.153 2 -1.1710560178899398 0.35558188188440504 1.0 ['ENST00000441869.5_1_11:46402650-46402776:+|nuORF'] 45460 5404 ISEGHAPLP True NCI_RA007_Epitope_Rep2 919.4763311916299 919.4752299358599 25.64 2 -1.171073527007808 0.35559000340277513 1.0 ['ENST00000541541.5_1_12:31862005-31881942:-|nuORF'] 13494 3453 DPEKQWNLAS True H1975_Epitope_Rep2 1186.56185172074 1186.56019490379 18.084 3 -1.1711903378768203 0.3556233301406463 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'CAMSAP2-CARS|1|fusion', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 31381 9747 GEAQRLPSAP True H1975_Epitope_Rep1 1024.5301576696397 1024.5290699358602 42.421 2 -1.1713136413194474 0.35571966880489986 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN'] 122991 11144 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 47.864 2 -1.1713586641674631 0.35572330531436275 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 17658 7130 EHRGPVQVT True PC9_epitope_Rep5 1021.53049202281 1021.52938993586 32.395 2 -1.1713617707462447 0.35572330531436275 1.0 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'chr19:38596001-38596078|190|16.73|0.04|8.81|-|2|MAP4K1,None|3', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF'] 99621 6968 SLFRSLLERY True PC9_epitope_Rep3 1282.70337100434 1282.70173490379 31.815 3 -1.1713687247547058 0.3557269416405177 1.0 ['TDRD6|p.I1712Vfs*5|1|0.1|ENSG00000180113|chr6:46693262-46693290|ATTGACTCAGAGATAAAGCAGACTCTTGG/-|frameshift_variant', 'nc|ENSG00000180113|O60522-2|TDRD6', 'ENSG00000180113|ENST00000316081|TDRD6'] 62086 24478 LLNGKKRRRWI True PC9_epitope_Rep4 1438.8997198254597 1438.89862993586 102.64 2 -1.171377268998794 0.3557269416405177 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 126238 16292 VPGWKLCP True NCI_RA007_Epitope_Rep5 898.4734947406598 898.47238993586 69.423 2 -1.1714436738323384 0.3557350606144618 1.0 ['ENSG00000152219|ENST00000282032|ARL14EP'] 18975 9609 ELFRNQAA True PC9_epitope_Rep1 947.4824792012298 947.48138993586 41.817 2 -1.1714978088952643 0.3557549333400539 1.0 ['ENST00000360760.9_1_2:201171311-201253960:+|nuORF', 'ENST00000444012.5_2_2:201171311-201236849:+|nuORF'] 79177 3345 PGEEAELLVK True NCI_RA007_Epitope_Rep2 1083.5811901829898 1083.58008993586 17.673 2 -1.1716656753457242 0.3557549333400539 1.0 ['ENSG00000182095|ENST00000430969|TNRC18'] 21986 6894 ESLYTLISKFF True H1975_Epitope_Rep3 1346.7122043525399 1346.71054490379 31.477 3 -1.1717011535951318 0.3557549333400539 1.0 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10'] 100771 6096 SLRQAGTAVP True NCI_RA007_Epitope_Rep5 998.5508931142199 998.54978993586 30.13 2 -1.1717098928521337 0.3557549333400539 1.0 ['ENSG00000101997|ENST00000376227|CCDC22'] 16695 8342 EEVGTAVR True H1975_Epitope_Rep3 859.4399456829099 859.4393949679301 37.073 1 -1.1717452968442148 0.3557630514497411 1.0 ['ENST00000437152.7_1_19:6752436-6752562:-|nuORF'] 23514 11263 EWLQEFGVP True NCI_RA007_Epitope_Rep3 1103.5287606873098 1103.52766993586 51.418 2 -1.1717773064557788 0.3557711693548387 1.0 ['C10orf76-MGEA5|1|fusion', 'ENSG00000198408|ENST00000361464|OGA', 'nc|ENSG00000198408|O60502-3|OGA'] 14469 11711 DTSLLKALN True PC9_epitope_Rep5 973.54441075145 973.54330993586 50.045 2 -1.1718234660416995 0.3557874045512966 1.0 ['ENSG00000179813|ENST00000313851|FAM216B'] 73713 13171 NGTELPPPP True H1975_Epitope_Rep2 920.4603467743199 920.4597949679301 55.788 1 -1.1718368417910696 0.3557874045512966 1.0 ['ENSG00000137975|ENST00000370565|CLCA2'] 22628 10261 ETQRDQERRIR True NCI_RA007_Epitope_Rep2 1485.7760354339696 1485.7749299358602 44.505 2 -1.1718531936580954 0.35579552184267227 1.0 ['ENST00000575300.1_1_16:4312060-4322792:-|nuORF', 'ENSG00000090447|ENST00000204517|TFAP4'] 59630 13119 LGSLAAGSFPL True PC9_epitope_Rep6 1031.56514619603 1031.56404993586 62.091 2 -1.171873529178079 0.35580363892948946 1.0 ['ENST00000511553.5_1_4:24582539-24585825:-|nuORF'] 31783 17961 GELQAQVKKNQ True PC9_epitope_Rep2 1241.67279915205 1241.67170993586 74.391 2 -1.1719959770322854 0.3558136897937586 1.0 ['ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'ENSG00000261794|ENST00000566740|GOLGA8H'] 93559 14976 RSRMWKWRPRK True H1975_Epitope_Rep1 1585.88883787193 1585.88774993586 62.848 2 -1.1720479110560276 0.3558136897937586 1.0 ['ENST00000359013.4_1_3:30648217-30664756:+|nuORF'] 37098 4932 GVSPCWPGWSR True NCI_RA007_Epitope_Rep1 1230.5604122521 1230.55876490379 23.267 3 -1.1720680792630342 0.3558136897937586 1.0 ['ENST00000397269.7_1_10:5966442-5967372:+|nuORF', 'ENST00000503699.1_1_4:331733-352211:+|nuORF', 'nc|ENSG00000292363|Q9HC73-2|CRLF2'] 66079 13153 LSNLPRSFTL True PC9_epitope_Rep2 1146.63970811862 1146.6386099358601 55.864 2 -1.1720702359872783 0.3558136897937586 1.0 ['ENSG00000095370|ENST00000314830|SH2D3C'] 80855 21728 PLVIPRIFV True PC9_epitope_Rep1 1052.67463707536 1052.6735499358601 88.408 2 -1.1720900568965078 0.3558136897937586 1.0 ['ENST00000602978.1_3_9:114235204-114235267:-|nuORF'] 7342 5674 ASAEPYGFR True NCI_RA007_Epitope_Rep4 996.4664947839199 996.46538993586 28.43 2 -1.1721043663290809 0.3558136897937586 1.0 ['ENSG00000131711|ENST00000296755|MAP1B'] 16961 5480 EGGPLEGAAW True PC9_epitope_Rep2 985.4505103666099 985.44940993586 26.474 2 -1.1721175314884347 0.3558136897937586 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 29477 19690 FVIDLQTRL True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 83.859 2 -1.1721897391722917 0.3558136897937586 1.0 ['ENST00000492779.5_1_20:34292405-34320086:-|nuORF', 'ENST00000429968.5_1_20:34292405-34322136:-|nuORF', 'ENSG00000131051|ENST00000253363|RBM39', 'nc|ENSG00000131051|Q14498-3|RBM39', 'ITGB4-RBM39|1|fusion', 'ENST00000471635.5_1_20:34297104-34301010:-|nuORF'] 7999 15935 ATDPNSEWKEH True H1975_Epitope_Rep2 1312.56839365316 1312.5672899358601 66.493 2 -1.1721985024482446 0.3558136897937586 1.0 ['nc|ENSG00000107021|Q9NVG8-3|TBC1D13', 'ENSG00000107021|ENST00000372648|TBC1D13'] 58601 9241 LFFGAGAC True NCI_RA007_Epitope_Rep1 784.3577962820799 784.35724496793 39.943 1 -1.172211165599618 0.3558218056290473 1.0 ['ENSG00000171773|ENST00000301944|NXNL1'] 6150 9362 APPAQVRRSFR True NCI_RA007_Epitope_Rep2 1283.72108675715 1283.7199899358602 41.025 2 -1.172251438896493 0.3558497839478955 1.0 ['ENST00000587856.1_1_17:43318935-43319418:+|nuORF'] 13851 6150 DRAIDGLNL True PC9_epitope_Rep5 985.51925863277 985.51816993586 28.641 2 -1.1722524562311292 0.3558497839478955 1.0 ['ENSG00000141012|ENST00000268695|GALNS', 'ENST00000568613.5_1_16:88880849-88909575:-|nuORF'] 61783 2627 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 13.529 2 -1.1722991228843171 0.3558497839478955 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 123917 25575 VKKATILIS True PC9_epitope_Rep3 971.6379172134699 971.63736496793 103.86 1 -1.1723051320027296 0.3558497839478955 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2', 'PAPPA2|p.H356N|1|0.2|ENSG00000116183|chr1:176594670-176594670|C/A|missense_variant'] 57213 18821 LEEYAATL True NCI_RA007_Epitope_Rep1 908.4491133842799 908.4485649679301 77.354 1 -1.172305856445377 0.3558497839478955 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 19287 24692 ELLRQSLPRWR True NCI_RA007_Epitope_Rep1 1452.83136548212 1452.83026993586 102.25 2 -1.172335261914412 0.3558578987150416 1.0 ['ENST00000278070.6_1_10:103901398-103901503:+|nuORF'] 91269 12231 RLWFTYRRKF True NCI_RA007_Epitope_Rep4 1471.8200725224299 1471.8184349037901 54.041 3 -1.1724477344493516 0.35589120822363035 1.0 ['nc|ENSG00000101844|Q8WYN0-2|ATG4A', 'ENSG00000101844|ENST00000372232|ATG4A'] 54764 8486 LAERENTGL True PC9_epitope_Rep6 1001.5141732523299 1001.51306993586 42.357 2 -1.172457894981507 0.3558948389453661 1.0 ['nc|ENSG00000155754|Q53TS8-3|C2CD6'] 79419 7598 PGPAQERYLL True NCI_RA007_Epitope_Rep4 1142.6084079903399 1142.60730993586 35.877 2 -1.172522327282262 0.3558948389453661 1.0 ['ENST00000316341.7_1_16:67978295-67978643:-|nuORF'] 88084 21674 QVVIWRKLLTT True PC9_epitope_Rep6 1355.8289058706298 1355.8278099358602 96.254 2 -1.1726391845004678 0.35591554973294365 1.0 ['ENST00000518829.5_1_8:94717221-94722089:+|nuORF'] 79772 21533 PHVPLEQRR True NCI_RA007_Epitope_Rep4 1130.63087477042 1130.6297699358602 93.352 2 -1.1727710421927213 0.35594885683693395 1.0 ['ENST00000579023.5_1_17:73127274-73127802:-|nuORF', 'nc|ENSG00000125458|Q8TCD5-2|NT5C', 'ENSG00000125458|ENST00000245552|NT5C', 'ENST00000583655.5_1_17:73127559-73127802:-|nuORF'] 98505 11052 SILFVPTFVP True NCI_RA007_Epitope_Rep3 1118.6375828603 1118.63648993586 50.574 2 -1.1728094856384208 0.3559695664222911 1.0 ['nc|ENSG00000259706|Q58FF3|HSP90B2P'] 35941 17018 GVAQVDQI True PC9_epitope_Rep5 828.4341320264798 828.43302993586 70.478 2 -1.1728401064982166 0.3559857913034716 1.0 ['ENST00000606788.5_1_20:44518901-44519711:+|nuORF'] 115844 16038 TVNDLSMMKY True PC9_epitope_Rep5 1200.551881284 1200.5507899358602 66.679 2 -1.1728514199006095 0.3559857913034716 1.0 ['ENSG00000156017|ENST00000376834|CARNMT1'] 60264 7574 LIEEGVDVP True NCI_RA007_Epitope_Rep2 969.5018772331298 969.50078993586 34.087 2 -1.1729295081983981 0.3559877071892791 1.0 ['nc|ENSG00000138798|P01133-2|EGF', 'nc|ENSG00000138798|P01133-3|EGF', 'ENSG00000138798|ENST00000265171|EGF'] 70070 11804 LYIATTVFSYF True NCI_RA007_Epitope_Rep4 1323.6750905678298 1323.6734549037901 52.381 3 -1.1729426671144105 0.3559877071892791 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15'] 130949 23295 VVIPRERRILT True PC9_epitope_Rep6 1350.8459529170998 1350.84484993586 102.71 2 -1.1729477045550742 0.3559877071892791 1.0 ['ENPP2|p.H282R|1|0.12|ENSG00000136960|chr8:119601451-119601451|T/C|missense_variant'] 74451 13599 NIYYYLEDDSM True PC9_epitope_Rep5 1424.58059812964 1424.5795099358602 57.333 2 -1.172964666699426 0.3559877071892791 1.0 ['nc|ENSG00000096093|Q5JVL4-3|EFHC1', 'ENSG00000096093|ENST00000371068|EFHC1', 'nc|ENSG00000096093|Q5JVL4-2|EFHC1'] 18132 12424 EIMHSFPKCIE True PC9_epitope_Rep5 1332.62062955016 1332.61897490379 52.788 3 -1.1729659716507277 0.3559877071892791 1.0 ['IPO5|p.A774P|1|0.13|ENSG00000065150|chr13:98014209-98014209|G/C|missense_variant'] 105674 6889 SVGDSRAIL True PC9_epitope_Rep6 916.4977949122 916.49668993586 35.407 2 -1.1729883494429227 0.3559877071892791 1.0 ['ENSG00000163644|ENST00000608933|PPM1K'] 70628 14324 MAMEHYPMTEQ True PC9_epitope_Rep1 1366.53557959686 1366.5344899358602 59.92 2 -1.1730158115255693 0.3559877071892791 1.0 ['COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF'] 63250 13477 LPAIAKQI True PC9_epitope_Rep1 852.54328855264 852.54218993586 56.696 2 -1.1730169758296476 0.3559877071892791 1.0 ['ENST00000474436.1_1_9:35090976-35092764:-|nuORF'] 3580 16325 AGPELQLLS True PC9_epitope_Rep3 926.5072969667399 926.50618993586 67.93 2 -1.1731517161187646 0.35603360328475886 1.0 ['nc|ENSG00000177614|Q8N414-2|PGBD5'] 125070 26422 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 109.36 3 -1.1733001302785322 0.3560696699117162 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 7798 6750 ASWKWYYPFHY True H1975_Epitope_Rep1 1546.70337100434 1546.7022699358602 31.004 2 -1.1733217228925776 0.3560696699117162 1.0 ['nc|ENSG00000088930|Q9H0D6-2|XRN2', 'ENSG00000088930|ENST00000377191|XRN2'] 80287 9510 PLEGLEQP True PC9_epitope_Rep1 881.4494477374499 881.44834993586 41.435 2 -1.1733239875396801 0.3560696699117162 1.0 ['ENSG00000198752|ENST00000361246|CDC42BPB'] 92737 18720 RRKKYGIVL True PC9_epitope_Rep3 1131.72404687927 1131.72241490379 77.232 3 -1.1733265996047306 0.3560696699117162 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 118366 20898 VDGQRSRSG True NCI_RA007_Epitope_Rep5 960.4737054226799 960.47260993586 87.381 2 -1.173367258111053 0.3560696699117162 1.0 ['ENST00000381356.8_1_12:25348171-25356891:+|nuORF'] 66706 17698 LSTKFKYRYE True PC9_epitope_Rep4 1333.7030366511697 1333.70192993586 76.1 2 -1.1733870675251474 0.3560696699117162 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'RAG1|p.G933E|1|0.24|ENSG00000166349|chr11:36576102-36576102|G/A|missense_variant'] 120056 10350 VFFIMLIV True PC9_epitope_Rep1 980.57689718004 980.57578993586 44.692 2 -1.1735252361883082 0.3560732951325483 1.0 ['ENSG00000265808|ENST00000578049|SEC22B', 'NOTCH2-SEC22B|1|fusion', 'NOTCH2-SEC22B|2|fusion'] 59959 19225 LHMKTLLPVSK True PC9_epitope_Rep1 1265.75296404905 1265.75131490379 78.747 3 -1.1735322000800819 0.3560732951325483 1.0 ['ENSG00000106804|ENST00000223642|C5'] 85124 7156 QISGEDEVECS True H1975_Epitope_Rep3 1194.47104768066 1194.46994993586 32.498 2 -1.1735571648693663 0.356081404427877 1.0 ['nc|ENSG00000047056|Q9Y2I8-2|WDR37'] 111894 23668 TLRRKYTR True PC9_epitope_Rep1 1092.6516102149997 1092.65050993586 95.83 2 -1.1736130472564965 0.3560886538219368 1.0 ['ENST00000398497.2_1_21:43422514-43422670:-|nuORF'] 95685 19264 SAWLTALLLP True PC9_epitope_Rep4 1083.63283183303 1083.6317299358602 82.202 2 -1.1736215860259318 0.3560886538219368 1.0 ['ENSG00000171561|ENST00000641541|OR2AT4'] 108755 9719 TENVGDSGLRF True PC9_epitope_Rep1 1193.56766537717 1193.5665699358601 42.242 2 -1.1736361289530455 0.3560886538219368 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B', 'ENST00000504041.1_1_5:169407-179718:+|nuORF'] 117057 16030 TYQRLRRP True NCI_RA007_Epitope_Rep4 1088.6203100867199 1088.61920993586 69.528 2 -1.1736418571292915 0.3560886538219368 1.0 ['SLC24A1|p.H40R|1|0.18|ENSG00000074621|chr15:65624199-65624199|A/G|missense_variant'] 86537 26320 QRAPKPLPRV True NCI_RA007_Epitope_Rep1 1160.71421047156 1160.71310993586 108.92 2 -1.1736786906040901 0.3560967624132677 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 61385 21176 LLELRRTLAH True H1975_Epitope_Rep2 1220.73533983896 1220.73370490379 87.649 3 -1.1736970995298186 0.35610487080038283 1.0 ['nc|ENSG00000164889|P04920-2|SLC4A2', 'nc|ENSG00000164889|P04920-3|SLC4A2', 'ENSG00000164889|ENST00000413384|SLC4A2'] 44362 5409 IMVTINDVP True NCI_RA007_Epitope_Rep3 1000.5263181591599 1000.52522993586 28.288 2 -1.1737200290463699 0.3561084947238522 1.0 ['ENSG00000125966|ENST00000246186|MMP24'] 98320 10113 SIGHKPVP True PC9_epitope_Rep3 833.4759372688098 833.47484993586 43.85 2 -1.1737319711272272 0.3561084947238522 1.0 ['THRB|p.E213V|1|0.42|ENSG00000151090|chr3:24143601-24143601|T/A|missense_variant'] 124463 7304 VLEWIEMPV True H1975_Epitope_Rep1 1114.5732683515798 1114.57216993586 33.106 2 -1.1737788588635993 0.35612471038581645 1.0 ['nc|ENSG00000112531|Q96PU8-5|QKI', 'nc|ENSG00000112531|Q96PU8-6|QKI'] 89159 13563 REHMERRRRFE True H1975_Epitope_Rep1 1600.8117097500397 1600.8106099358602 57.296 2 -1.173790014095718 0.35612471038581645 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2'] 133984 21583 WPLFLILKFSA True PC9_epitope_Rep6 1333.77983041989 1333.77817490379 95.895 3 -1.1739090463141189 0.35613023443204994 1.0 ['ENST00000443527.6_2_11:45902893-45903094:+|nuORF'] 15942 7053 EDSTWERRQD True H1975_Epitope_Rep3 1320.5694562823198 1320.5683499358602 32.094 2 -1.1739298988737694 0.35613023443204994 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7', 'CHD7|p.R1548Gfs*11|1|0.18|ENSG00000171316|chr8:60841749-60841749|G/-|frameshift_variant'] 30457 8426 GAGGCRAH True H1975_Epitope_Rep3 727.3183910815899 727.31784496793 37.395 1 -1.1739448255706488 0.35613023443204994 1.0 ['ENST00000531660.5_1_11:47270518-47282963:+|nuORF', 'ENST00000395397.7_1_11:47270518-47282963:+|nuORF', 'ENST00000527464.5_1_11:47270203-47282963:+|nuORF', 'ENST00000529540.5_1_11:47269870-47282963:+|nuORF'] 20908 17707 EQTHKLELQ True PC9_epitope_Rep5 1124.5825871653199 1124.5814899358602 73.127 2 -1.1739469876399002 0.35613023443204994 1.0 ['nc|ENSG00000175471|Q6DN14-4|MCTP1', 'nc|ENSG00000175471|Q6DN14-2|MCTP1', 'ENSG00000175471|ENST00000515393|MCTP1', 'nc|ENSG00000175471|Q6DN14-5|MCTP1', 'nc|ENSG00000175471|Q6DN14-3|MCTP1'] 125642 19325 VMKKMLGLR True NCI_RA007_Epitope_Rep2 1074.6405771490997 1074.63946993586 80.072 2 -1.173970395618911 0.35613023443204994 1.0 ['ENST00000393104.6_1_10:112641005-112641053:+|nuORF'] 8752 19996 AVDWVMMQ True PC9_epitope_Rep4 978.43030959934 978.42920993586 85.047 2 -1.1740382252086308 0.35613023443204994 1.0 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-3|SIAH1', 'ENSG00000181788|ENST00000312960|SIAH2'] 3443 19063 AGLEPAPKDAP True PC9_epitope_Rep4 1064.5502244078798 1064.54912993586 81.416 2 -1.174048835158327 0.35613023443204994 1.0 ['ENSG00000164853|ENST00000316333|UNCX'] 104380 7736 SSGERWIRY True NCI_RA007_Epitope_Rep3 1152.5676058075198 1152.56650993586 37.552 2 -1.1740496678325691 0.35613023443204994 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 68044 9701 LTNHLQKYR True PC9_epitope_Rep1 1171.6461904813898 1171.64455490379 42.172 3 -1.1740527930138969 0.35613023443204994 1.0 ['ENST00000426101.5_1_1:147887382-147892533:+|nuORF'] 114773 5811 TSYVSQSIPFM True NCI_RA007_Epitope_Rep2 1258.5903749676997 1258.58872490379 27.222 3 -1.1740558345414067 0.35613023443204994 1.0 ['ENSG00000171495|ENST00000399564|MROH2B', 'MROH2B|p.N1445Tfs*12|1|0.3|ENSG00000171495|chr5:41000696-41000696|G/-|frameshift_variant', 'MROH2B|p.N180Kfs*5|2|0.23|ENSG00000171495|chr5:41061645-41061646|-/T|frameshift_variant', 'MROH2B|p.H825Tfs*21|1|0.21|ENSG00000171495|chr5:41018987-41018987|G/-|frameshift_variant'] 12214 8588 DIPIYANVHK True NCI_RA007_Epitope_Rep5 1168.6240580544797 1168.62296993586 39.714 2 -1.1742540068540233 0.35621388192931874 1.0 ['ARAP2-PDS5A|1|fusion', 'ENSG00000047365|ENST00000303965|ARAP2', 'ARAP2|p.G359Efs*29|2|0.27|ENSG00000047365|chr4:36212453-36212453|C/-|frameshift_variant', 'ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 45708 12839 ISLNLFFLYIF True H1975_Epitope_Rep3 1388.77441068628 1388.7733099358602 54.606 2 -1.17431546525895 0.3562345772271743 1.0 ['ENST00000579991.2_1_17:56167288-56167468:+|nuORF'] 58210 9641 LESRDQAW True PC9_epitope_Rep2 1003.4723084403498 1003.47120993586 42.425 2 -1.174364170632111 0.35625527200392804 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 13781 4033 DQRLLLPHWAK True NCI_RA007_Epitope_Rep2 1375.77245362367 1375.7707949037901 20.325 3 -1.1743956859235616 0.3562885559612237 1.0 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1', 'nc|ENSG00000177628|P04062-3|GBA1', 'ENST00000566701.5_1_1:155184905-155187601:-|nuORF', 'ENST00000486197.5_1_1:155184905-155187358:-|nuORF', 'ENST00000473223.5_1_1:155184463-155187072:-|nuORF', 'ENST00000459805.5_1_1:155184905-155186549:-|nuORF'] 83539 5350 QDLPQVSV True H1975_Epitope_Rep2 884.46034677432 884.45924993586 25.626 2 -1.1744176683676781 0.3563092495373343 1.0 ['ENST00000424720.2_12:132824120-132905933:-|nuORF', 'nc|ENSG00000182870|Q9HCQ5|GALNT9', 'ENSG00000182870|ENST00000328957|GALNT9'] 107837 18128 TARGVMLWGWR True H1975_Epitope_Rep1 1331.6920951279897 1331.6909899358602 75.528 2 -1.1744534184420827 0.3563335599365511 1.0 ['MUC2|p.K642R|1|0.42|ENSG00000198788|chr11:1107114-1107114|A/G|missense_variant'] 94059 16359 RVRVKGGG True NCI_RA007_Epitope_Rep1 827.5089687325898 827.50786993586 67.745 2 -1.1744585990630376 0.3563335599365511 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 5301 11051 ALSEQEFSGQ True H1975_Epitope_Rep3 1094.48801807414 1094.4869299358602 47.598 2 -1.1744869978436203 0.3563335599365511 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'ENST00000471834.1_1_6:152690575-152702320:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-12|SYNE1'] 108639 18600 TEKNAEEHCF True PC9_epitope_Rep1 1206.49753721202 1206.49642993586 76.332 2 -1.1746346050209335 0.3564001208520067 1.0 ['ENSG00000132205|ENST00000254528|EMILIN2'] 73706 7373 NGSPRLLEG True PC9_epitope_Rep1 941.4930438849299 941.49194993586 33.173 2 -1.1746361876293334 0.3564001208520067 1.0 ['PCDH1|p.K1028Nfs*7|1|0.24|ENSG00000156453|chr5:141863250-141863250|G/-|frameshift_variant', 'nc|ENSG00000156453|Q08174|PCDH1', 'ENSG00000156453|ENST00000287008|PCDH1'] 101838 21866 SPIQYITV True PC9_epitope_Rep3 919.5014833103099 919.50038993586 89.41 2 -1.1747172388784748 0.35641993957703927 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549', 'KIAA1549|p.A1010Gfs*12|1|0.57|ENSG00000122778|chr7:138911264-138911265|-/T|frameshift_variant'] 14917 6257 DYKYKQGYR True NCI_RA007_Epitope_Rep3 1219.5985715826298 1219.59691490379 31.615 3 -1.1747360132189126 0.35641993957703927 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant'] 78853 9427 PERQLSVP True PC9_epitope_Rep1 924.5028802926399 924.50178993586 41.119 2 -1.1747412795795316 0.35641993957703927 1.0 ['nc|ENSG00000197323|Q9UPN9-2|TRIM33', 'ENSG00000197323|ENST00000358465|TRIM33'] 129228 9116 VTDLGIPR True PC9_epitope_Rep4 869.49706663621 869.49596993586 42.651 2 -1.174751408022328 0.35641993957703927 1.0 ['PCDHB11|p.R478Tfs*63|1|0.09|ENSG00000197479|chr5:141201206-141201209|AGAG/-|frameshift_variant', 'ENSG00000197479|ENST00000354757|PCDHB11', 'nc|ENSG00000197479|Q9Y5F2-2|PCDHB11'] 52548 22616 KPRRRRRHWGR True PC9_epitope_Rep6 1559.9246462170297 1559.9230049037901 100.04 3 -1.1747926498745305 0.356423554291181 1.0 ['ENST00000344686.6_1_17:43367939-43368083:-|nuORF'] 16089 3663 EEDLLYWVD True NCI_RA007_Epitope_Rep4 1180.52882025696 1180.5277299358602 20.192 2 -1.1748209118702089 0.356423554291181 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 139909 5703 YVETNEELIP True H1975_Epitope_Rep3 1205.58158410581 1205.5804899358602 26.968 2 -1.1749693859506192 0.3564523437893359 1.0 ['ENSG00000129951|ENST00000520876|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-2|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-3|PLPPR3'] 61987 24490 LLLPMPMLLI True NCI_RA007_Epitope_Rep2 1152.70144607016 1152.7008749679298 102.88 1 -1.1749723838917916 0.3564523437893359 1.0 ['ENSG00000186881|ENST00000334726|OR13F1'] 139626 9745 YTRQERYRARP True PC9_epitope_Rep6 1494.7803925384198 1494.77875490379 47.906 3 -1.1750250126153636 0.3564721578894371 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG', 'ENST00000471517.5_1_19:38845366-38853372:+|nuORF', 'ENST00000412458.6_1_19:38845366-38860119:+|nuORF', 'ACTN4-CATSPERG|1|fusion'] 99339 11846 SLDRKVKVY True H1975_Epitope_Rep3 1106.64479349906 1106.64368993586 50.714 2 -1.1750638739347206 0.3564721578894371 1.0 ['ENST00000512550.1_1_5:72868339-72873863:+|nuORF', 'nc|ENSG00000164338|Q8TED0-2|UTP15', 'nc|ENSG00000164338|Q8TED0-3|UTP15', 'ENSG00000164338|ENST00000296792|UTP15'] 91355 5590 RMPWPRQQGW True H1975_Epitope_Rep3 1340.6560439724399 1340.65494993586 26.543 2 -1.1750701044044563 0.3564721578894371 1.0 ['ENST00000320934.7_1_11:117100310-117100430:-|nuORF'] 69290 9747 LVPFESPR True PC9_epitope_Rep5 943.51271670035 943.51160993586 42.463 2 -1.1751771440399283 0.3564721578894371 1.0 ['ENSG00000187741|ENST00000389301|FANCA', 'nc|ENSG00000187741|O15360-3|FANCA'] 81913 1982 PSMCMLLCFSE True NCI_RA007_Epitope_Rep1 1259.50585969171 1259.5047699358602 10.443 2 -1.1752384746760225 0.35648835745752044 1.0 ['ENST00000285518.10_1_8:6617095-6617146:+|nuORF'] 99780 5975 SLGPYHKSR True NCI_RA007_Epitope_Rep5 1043.55122746739 1043.55012993586 29.666 2 -1.175253885725187 0.35648835745752044 1.0 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.T7Ifs*24|1|0.1|ENSG00000134504|chr18:26501203-26501216|TGCAGGGGATCTAG/-|frameshift_variant'] 82819 10496 PVSLTEGK True H1975_Epitope_Rep1 829.4545331178899 829.4539849679301 45.327 1 -1.1753577358859206 0.3565090433097129 1.0 ['ENST00000223073.6_1_7:127950586-127950808:-|nuORF'] 91610 20151 RPEDEEELEKE True H1975_Epitope_Rep1 1401.62596809893 1401.62486993586 83.861 2 -1.1753900558554087 0.35651714242561544 1.0 ['ENST00000495589.5_1_1:155181271-155183486:+|nuORF', 'ENST00000440904.1_1_1:155200937-155204113:+|nuORF', 'nc|ENSG00000173171|Q13505-3|MTX1', 'ENST00000481771.5_1_1:155181647-155183486:+|nuORF', 'nc|ENSG00000173171|Q13505-2|MTX1', 'ENSG00000173171|ENST00000368376|MTX1', 'ENST00000495492.1_1_1:155182265-155182385:+|nuORF'] 120503 22890 VFWNRKII True PC9_epitope_Rep5 1074.6338348925399 1074.6327299358602 93.045 2 -1.1755058249691752 0.3565629995091438 1.0 ['ENST00000400286.2_1_13:86368440-86368581:-|nuORF'] 33038 18942 GKAGVQWHNL True PC9_epitope_Rep1 1108.5777765684002 1108.57666993586 77.644 2 -1.1756051247809585 0.3565962695396078 1.0 ['nc|ENSG00000260314|P22897-2|MRC1'] 110492 15221 TIQACWRSY True H1975_Epitope_Rep1 1126.52296411422 1126.5218699358602 63.811 2 -1.1756349580493353 0.35661607390067707 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B'] 121759 23397 VGLVRTMWRR True PC9_epitope_Rep5 1272.72372960944 1272.72317496793 94.977 1 -1.175654374997657 0.35661607390067707 1.0 ['ENST00000443864.6_1_7:44664063-44684998:+|nuORF'] 111823 16677 TLRHEILELII True PC9_epitope_Rep5 1348.8078360728798 1348.8067299358602 69.151 2 -1.17568288652914 0.35661607390067707 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000103472|A6NIE6|RRN3P2', 'ENST00000564580.5_1_16:29086353-29108616:+|nuORF', 'ENST00000561685.1_1_16:15168568-15177423:-|nuORF', 'nc|ENSG00000085721|Q9NYV6-2|RRN3'] 61193 13716 LLDNVRKV True PC9_epitope_Rep4 955.58146496651 955.58036993586 60.646 2 -1.175699537981641 0.35661607390067707 1.0 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF', 'nc|ENSG00000198814|P32189-1|GK', 'nc|ENSG00000198814|P32189-4|GK', 'nc|ENSG00000198814|P32189-2|GK', 'ENSG00000229894|ENST00000505354|GK3', 'ENSG00000198814|ENST00000427190|GK', 'ENST00000479048.5_1_X:30695568-30713238:+|nuORF', 'ENST00000328462.7_1_X:101035000-101035489:-|nuORF'] 52272 10448 KNSELRCY True H1975_Epitope_Rep2 1011.4807649490699 1011.47966993586 45.203 2 -1.1757171822620318 0.35662417095609056 1.0 ['nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant'] 118598 12010 VEAIREALVDK True H1975_Epitope_Rep1 1241.69795127073 1241.6968499358602 51.204 2 -1.1758304737044079 0.3566484608995495 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6', 'CYP2B6|p.L201Cfs*24|1|0.15|ENSG00000197408|chr19:41007020-41007020|C/-|frameshift_variant', 'nc|ENSG00000197408|P20813-2|CYP2B6'] 16762 21337 EFALLRDFV True PC9_epitope_Rep5 1108.59169529704 1108.5905899358602 87.13 2 -1.1758371317283671 0.3566484608995495 1.0 ['nc|ENSG00000100167|Q9UH03-2|SEPTIN3', 'nc|ENSG00000100167|Q9UH03|SEPTIN3', 'ENSG00000100167|ENST00000644076|SEPTIN3'] 31614 18488 GEGKVRRV True NCI_RA007_Epitope_Rep5 899.5300980999899 899.52900993586 77.939 2 -1.175848028148449 0.3566484608995495 1.0 ['ENST00000552528.1_1_12:56503657-56504297:+|nuORF'] 22412 7174 ETFCPMECPP True H1975_Epitope_Rep3 1152.4289892699999 1152.42788993586 32.57 2 -1.1758886442329324 0.3566691416130778 1.0 ['nc|ENSG00000275395|Q9Y6R7|FCGBP'] 112518 9443 TPAAFAGK True PC9_epitope_Rep2 761.40718900265 761.40608993586 41.663 2 -1.1759490664254377 0.35668982180610087 1.0 ['ENSG00000134321|ENST00000382040|RSAD2'] 102540 11244 SQAHRNFLEDG True H1975_Epitope_Rep3 1272.58471242364 1272.58360993586 48.352 2 -1.176009009362401 0.3567105014786384 1.0 ['ENSG00000116209|ENST00000234831|TMEM59'] 3836 6045 AGYPVYKYVPY True NCI_RA007_Epitope_Rep2 1318.65977485686 1318.6581149037902 28.119 3 -1.1760414966233637 0.35673118063070997 1.0 ['ENST00000313755.9_1_22:18900690-18907344:-|nuORF', 'nc|ENSG00000100033|O43272-2|PRODH', 'nc|ENSG00000100033|O43272-1|PRODH', 'ENSG00000100033|ENST00000357068|PRODH'] 25244 19524 FEDENFIESSV True NCI_RA007_Epitope_Rep5 1314.56157693722 1314.5599349037902 81.985 3 -1.1761053431147102 0.3567473700105703 1.0 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000459929.5_1_1:185275751-185278625:-|nuORF'] 29333 20355 FVDRGKDSV True PC9_epitope_Rep5 1021.5192586327698 1021.51816993586 83.33 2 -1.1761096782191958 0.3567473700105703 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 60137 4903 LHVVGAPG True NCI_RA007_Epitope_Rep1 748.42317341996 748.42206993586 23.151 2 -1.1761647993852404 0.3567554643949213 1.0 ['ENSG00000139531|ENST00000266971|SUOX'] 20477 5071 EPSMSWWP True H1975_Epitope_Rep2 1018.42185309062 1018.42074993586 24.588 2 -1.176183428017785 0.3567716525525034 1.0 ['nc|ENSG00000135424|Q13683-9|ITGA7', 'ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7'] 109464 4996 TGVFSTRS True PC9_epitope_Rep2 853.42938099921 853.42828993586 24.589 2 -1.1762855472504004 0.3567716525525034 1.0 ['ENSG00000136932|ENST00000375119|TRMO'] 123834 25912 VIVLSVTTESK True PC9_epitope_Rep5 1174.68090422426 1174.67980993586 105.15 2 -1.176336612333629 0.35677525700552387 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-2|SLC30A5', 'ENST00000507354.5_1_5:68398890-68419336:+|nuORF'] 111509 13833 TLLPVGPR True H1975_Epitope_Rep3 851.52288746123 851.5223349679301 58.516 1 -1.1763684768463456 0.35677525700552387 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 126026 23205 VPAPPAALAA True PC9_epitope_Rep6 876.5069030439199 876.5063549679301 102.36 1 -1.176385192986443 0.35677886127713115 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 748 9162 AAVQLFCFC True NCI_RA007_Epitope_Rep2 1000.4510450439199 1000.4504749679301 40.244 1 -1.1763897515353665 0.35677886127713115 1.0 ['ENST00000508535.1_1_4:38802554-38806811:-|nuORF', 'ENST00000506146.5_1_4:38802554-38858398:-|nuORF'] 12376 9943 DKAIREQGP True H1975_Epitope_Rep1 1012.53015766964 1012.52906993586 43.182 2 -1.176456941266523 0.3568121193819518 1.0 ['nc|ENSG00000163346|Q96AQ6-3|PBXIP1', 'nc|ENSG00000163346|Q96AQ6-2|PBXIP1', 'ENSG00000163346|ENST00000368463|PBXIP1'] 136975 25580 YKKKINPIK True PC9_epitope_Rep5 1130.7175645164998 1130.71646993586 103.7 2 -1.1765135711968195 0.3568283046880898 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 140933 18089 YYYRDRDWRWV True NCI_RA007_Epitope_Rep2 1676.7848092125198 1676.78370993586 75.115 2 -1.1765147283158068 0.3568283046880898 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 120494 23174 VFVVLEPCRRR True PC9_epitope_Rep6 1372.7761591051196 1372.77506993586 102.24 2 -1.1765486682080972 0.356836397035695 1.0 ['ENST00000518921.1_1_8:63056787-63057258:-|nuORF'] 18311 14205 EITRLLRHSRW True H1975_Epitope_Rep1 1465.82661445485 1465.82550993586 59.818 2 -1.1766050805241983 0.3568525811200161 1.0 ['L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|219|1|anti-sense'] 16887 7615 EFYNRYIMKSF True NCI_RA007_Epitope_Rep3 1496.7122214358799 1496.71057490379 37.082 3 -1.1766235983945328 0.3568525811200161 1.0 ['nc|ENSG00000100796|Q6IN85-4|PPP4R3A', 'nc|ENSG00000100796|Q6IN85-2|PPP4R3A', 'ENSG00000100796|ENST00000554943|PPP4R3A'] 14368 9652 DTEKKLEEI True H1975_Epitope_Rep1 1103.5710194221099 1103.56992993586 42.055 2 -1.1766538976476077 0.35686876438986953 1.0 ['ENSG00000111860|ENST00000368491|CEP85L', 'nc|ENSG00000111860|Q5SZL2-4|CEP85L'] 36616 14793 GVLLHLQSV True PC9_epitope_Rep1 964.5705659296401 964.56946993586 61.721 2 -1.1766625048153843 0.35686876438986953 1.0 ['ENST00000511909.5_1_4:122053805-122071269:-|nuORF'] 62732 14517 LLYIPPTH True H1975_Epitope_Rep2 952.5382031722002 952.53710993586 60.998 2 -1.176786737891893 0.3569020180162045 1.0 ['nc|ENSG00000162139|Q9UQ49|NEU3', 'ENSG00000162139|ENST00000294064|NEU3'] 13362 5741 DNDGSTALSIA True PC9_epitope_Rep2 1062.4829326937 1062.48182993586 27.474 2 -1.17689766104926 0.35694785179593636 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'nc|ENSG00000107104|Q14678-2|KANK1'] 65695 23609 LSHKERKGIL True NCI_RA007_Epitope_Rep2 1179.7087907379498 1179.70714490379 98.983 3 -1.176950967804147 0.3569559419268802 1.0 ['KIF19|p.E773G|1|0.05|ENSG00000196169|chr17:74354171-74354171|A/G|missense_variant'] 19074 5379 ELHHVRTLKIM True PC9_epitope_Rep1 1375.7758247519498 1375.77418490379 25.524 3 -1.1770401092046443 0.3569972826086957 1.0 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2', 'ARHGEF2|p.P672Qfs*7|2|0.14|ENSG00000116584|chr1:155952207-155952207|C/-|frameshift_variant'] 44840 12084 IPWYQSMFNWN True H1975_Epitope_Rep1 1484.6547065597597 1484.65360993586 51.494 2 -1.1770421807910398 0.3569972826086957 1.0 ['nc|ENSG807|P61550|ERVS71-1'] 33667 12770 GLPLPRDLP True PC9_epitope_Rep6 976.57056592964 976.56946993586 60.614 2 -1.1771130297108117 0.3570161645386502 1.0 ['nc|ENSG00000171462|Q6UY11-2|DLK2', 'ENSG00000171462|ENST00000372488|DLK2'] 105604 9395 SVEKKNENL True PC9_epitope_Rep4 1059.55603806431 1059.5549499358601 43.745 2 -1.1771371337252512 0.3570161645386502 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14', 'nc|ENSG00000185842|Q0VDD8-2|DNAH14'] 3801 15222 AGVLPDIEQF True PC9_epitope_Rep2 1087.5549754351498 1087.5538699358601 63.817 2 -1.1771539644592295 0.3570161645386502 1.0 ['nc|ENSG00000169682|Q9H2V7-5|SPNS1', 'ENST00000568900.5_1_16:28986322-28990816:+|nuORF', 'ENST00000569969.5_2_16:28986191-28992937:+|nuORF', 'nc|ENSG00000169682|Q9H2V7-4|SPNS1', 'nc|ENSG00000169682|Q9H2V7-2|SPNS1', 'ENSG00000169682|ENST00000311008|SPNS1'] 125644 23723 VMKKMLGLR True PC9_epitope_Rep3 1074.6405771490997 1074.63946993586 96.536 2 -1.177182516565361 0.3570161645386502 1.0 ['ENST00000393104.6_1_10:112641005-112641053:+|nuORF'] 106716 9052 SYDCEVNAPIQ True H1975_Epitope_Rep2 1237.52850298713 1237.52740993586 39.771 2 -1.1772496721197974 0.3570161645386502 1.0 ['nc|ENSG00000100644|Q16665-3|HIF1A', 'ENSG00000100644|ENST00000337138|HIF1A'] 122070 5189 VGRAPKQA True PC9_epitope_Rep4 825.48208527841 825.48098993586 26.658 2 -1.177263374055225 0.3570161645386502 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 17097 13281 EGRLRAAYNLV True NCI_RA007_Epitope_Rep3 1260.6938689498 1260.69276993586 59.511 2 -1.1772685982450564 0.3570161645386502 1.0 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF'] 56834 10440 LEDDGEFYM True PC9_epitope_Rep5 1117.42739196353 1117.42628993586 45.144 2 -1.1773352911821526 0.3570242527925933 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1'] 34050 6579 GNQLIPQPL True NCI_RA007_Epitope_Rep2 978.5498304850598 978.54872993586 30.202 2 -1.1773704174646376 0.35703953409391076 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000519559.1_1_8:52732913-52752014:-|nuORF', 'nc|ENSG00000168300|Q96MG8-2|PCMTD1'] 136691 15898 YIGLKETNR True PC9_epitope_Rep2 1092.5927579262 1092.5916699358602 66.405 2 -1.1773815786716901 0.35703953409391076 1.0 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 115000 16107 TTLCPWRTAF True NCI_RA007_Epitope_Rep5 1194.5855643707798 1194.58390490379 68.683 3 -1.177391587943661 0.35703953409391076 1.0 ['ENST00000557781.5_1_12:57498245-57498961:-|nuORF'] 62913 20919 LMWEVRGSK True PC9_epitope_Rep1 1104.5749996870798 1104.57390993586 85.287 2 -1.1774084680998533 0.35703953409391076 1.0 ['ENST00000512845.5_1_4:121737455-121843799:-|nuORF', 'nc|ENSG00000138738|Q9NQX1-3|PRDM5', 'ENST00000505484.5_1_4:121737976-121843799:-|nuORF', 'nc|ENSG00000138738|Q9NQX1-4|PRDM5', 'nc|ENSG00000138738|Q9NQX1-2|PRDM5', 'ENSG00000138738|ENST00000264808|PRDM5'] 15862 6846 EDLTQVLLSCH True H1975_Epitope_Rep1 1256.6070876610002 1256.6059899358602 31.377 2 -1.1774971007920447 0.35703953409391076 1.0 ['ENST00000216039.9_1_22:39083550-39083643:-|nuORF'] 124422 19809 VLEKSLSDP True PC9_epitope_Rep3 986.5284263341399 986.5273299358599 81.429 2 -1.1776195367171305 0.35705032261310327 1.0 ['ENSG00000179097|ENST00000319595|HTR1F'] 13567 10119 DPNMLDTLVP True PC9_epitope_Rep3 1113.53761111885 1113.53650993586 43.873 2 -1.1776457901937085 0.35705032261310327 1.0 ['ENSG00000138629|ENST00000395081|UBL7'] 58098 5674 LERSSGHC True PC9_epitope_Rep4 887.3919499446699 887.39084993586 28.632 2 -1.177659456904585 0.35705032261310327 1.0 ['nc|ENSG00000104892|Q6P597-2|KLC3', 'ENSG00000104892|ENST00000391946|KLC3', 'nc|ENSG00000104892|Q6P597-3|KLC3'] 59003 11914 LGALDRLAAL True PC9_epitope_Rep1 1011.6076797143498 1011.60658993586 50.694 2 -1.177662866609414 0.35705032261310327 1.0 ['ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 45592 15595 ISGNPVTLT True PC9_epitope_Rep5 900.4916469026001 900.49109496793 64.995 1 -1.1777301709630914 0.35705032261310327 1.0 ['nc|ENSG00000143297|Q96RD9-4|FCRL5', 'nc|ENSG00000143297|Q96RD9-3|FCRL5', 'ENSG00000143297|ENST00000361835|FCRL5', 'FCRL5|p.Q200K|1|0.5|ENSG00000143297|chr1:157544508-157544508|G/T|missense_variant', 'ENST00000481082.1_1_1:157512505-157514867:-|nuORF'] 104029 17527 SRSPHKRKRN True NCI_RA007_Epitope_Rep4 1264.72248373948 1264.72138993586 75.867 2 -1.1777378594780743 0.35705032261310327 1.0 ['ENSG00000168566|ENST00000342415|SNRNP48'] 68136 12159 LTPLQTELYKR True H1975_Epitope_Rep1 1360.77145056416 1360.7703499358602 51.787 2 -1.1778061647168654 0.3570584092166826 1.0 ['ENSG00000085999|ENST00000371975|RAD54L'] 138753 23333 YSCEDSET True NCI_RA007_Epitope_Rep4 932.30694247768 932.30584993586 101.31 2 -1.1778286314117685 0.3570790728093675 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 92452 13458 RQVVLPQL True PC9_epitope_Rep6 951.5865503469497 951.5860049679301 63.459 1 -1.1778342575153302 0.3570871588479437 1.0 ['ENSG00000113048|ENST00000261413|MRPS27', 'nc|ENSG00000113048|Q92552-2|MRPS27', 'ENST00000523654.5_1_5:71615928-71616063:-|nuORF', 'ENST00000520285.5_1_5:71590560-71616015:-|nuORF', 'ENST00000522404.5_1_5:71537397-71616033:-|nuORF'] 124221 9535 VLARMVDI True NCI_RA007_Epitope_Rep4 915.5211732090698 915.52006993586 43.527 2 -1.1779378319986804 0.3571203984354366 1.0 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3190651-3210559:+|nuORF'] 117540 17225 VAFWWYRGSL True PC9_epitope_Rep3 1283.6451278522297 1283.64349490379 71.409 3 -1.1779422899367842 0.35712848375088035 1.0 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF'] 4659 8394 ALCSTPRM True NCI_RA007_Epitope_Rep1 877.41499388837 877.4144449679301 36.652 1 -1.1780390257281033 0.3571742985423767 1.0 ['ENST00000552360.3_1_19:47778534-47778834:+|nuORF'] 122998 11308 VGWSDSYTCEY True PC9_epitope_Rep5 1308.49686850568 1308.4957699358602 48.488 2 -1.1780994597514929 0.3571823829765827 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 116113 7029 TVSPDTAL True PC9_epitope_Rep4 802.4072485723 802.40614993586 34.287 2 -1.1781486450061402 0.3572156196943973 1.0 ['ENSG00000151746|ENST00000652176|BICD1'] 35282 7766 GSPNTAKLL True PC9_epitope_Rep5 899.5076313199099 899.50652993586 34.815 2 -1.1781637548222375 0.3572237034056039 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|165|3|sense'] 22857 14058 EVENPEHNDFL True PC9_epitope_Rep5 1341.58370936413 1341.58260993586 59.088 2 -1.1781922271088552 0.3572317869134902 1.0 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 134979 20519 YAGDLQKKLV True PC9_epitope_Rep3 1133.64445914589 1133.6433699358602 84.187 2 -1.1782678641944724 0.3572650217560804 1.0 ['APOA4|p.E312Kfs*29|1|0.31|ENSG00000110244|chr11:116821124-116821124|C/-|frameshift_variant', 'ENSG00000110244|ENST00000357780|APOA4'] 42356 10200 IELTLNKP True PC9_epitope_Rep1 926.54368247546 926.54258993586 44.114 2 -1.1783041842570223 0.3572731045410531 1.0 ['ENSG00000164151|ENST00000296564|ICE1'] 117058 9258 TYQRSEVIL True H1975_Epitope_Rep3 1107.59242357303 1107.5913299358601 40.603 2 -1.1783770144121335 0.35730184479571436 1.0 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 87081 10828 QSELPDFGGNF True H1975_Epitope_Rep1 1209.5302172392896 1209.52912993586 46.612 2 -1.1783839546831167 0.35730184479571436 1.0 ['SEC16A|p.V738F|1|0.27|ENSG00000148396|chr9:136475404-136475404|C/A|missense_variant'] 83936 11387 QEKSEKPQKRP True H1975_Epitope_Rep1 1353.7364620377698 1353.73536993586 48.779 2 -1.1784674700271627 0.3573099268127059 1.0 ['ENSG00000108510|ENST00000397786|MED13', 'MED13|p.H1262Pfs*53|1|0.19|ENSG00000108510|chr17:61982217-61982218|GT/-|frameshift_variant'] 95792 5334 SDDLPLNVSRE True PC9_epitope_Rep5 1243.6044448087102 1243.60279490379 25.529 3 -1.1786346327158899 0.3573970449544169 1.0 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF'] 11149 5652 DEFYRWFQKMM True H1975_Epitope_Rep1 1579.69519147275 1579.6940899358601 26.808 2 -1.1786373484901176 0.3573970449544169 1.0 ['nc|ENSG00000176438|Q6ZMZ3-2|SYNE3', 'ENSG00000176438|ENST00000682763|SYNE3', 'nc|ENSG00000176438|Q6ZMZ3-3|SYNE3', 'SYNE3|p.L395Afs*20|1|0.25|ENSG00000176438|chr14:95452338-95452339|-/C|frameshift_variant', 'ENST00000555759.1_1_14:95918480-95934190:-|nuORF'] 96271 8575 SEERQLAVL True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 40.464 2 -1.178671055750958 0.3573970449544169 1.0 ['ENSG00000009335|ENST00000348165|UBE3C', 'ENST00000470408.5_1_7:157015856-157060446:+|nuORF'] 4651 13829 ALCALGDSRIF True PC9_epitope_Rep5 1164.59612905448 1164.59449490379 58.213 3 -1.1788170646847327 0.35743027437567587 1.0 ['ENST00000530342.2_1_11:67007661-67007709:+|nuORF'] 67690 12405 LTFWKNWHFRL True H1975_Epitope_Rep1 1546.81973816926 1546.81864993586 52.749 2 -1.1788325661385486 0.3574338597726587 1.0 ['nc|ENSG00000165688|Q10713-2|PMPCA'] 92005 17604 RPRRPRRWWRQ True H1975_Epitope_Rep1 1648.9399619279998 1648.93886993586 73.246 2 -1.1788837020453313 0.3574338597726587 1.0 ['ENST00000372022.5_1_9:136199397-136199478:-|nuORF'] 120576 15072 VGAFAGAA True NCI_RA007_Epitope_Rep5 662.33877508966 662.33822496793 64.643 1 -1.1789467714958022 0.3574625927323023 1.0 ['ENST00000420551.1_1_2:242441106-242447985:-|nuORF', 'ENST00000316586.8_1_2:242447465-242448045:-|nuORF'] 129385 7108 VTEFYAANA True PC9_epitope_Rep5 984.4552613938798 984.45416993586 32.309 2 -1.1789630143097385 0.3574625927323023 1.0 ['ENSG00000137251|ENST00000259782|TINAG', 'nc|ENSG00000137251|Q9UJW2-2|TINAG'] 122362 8061 VGSDRGFLA True PC9_epitope_Rep1 920.4715801643599 920.47048993586 35.829 2 -1.178969584959354 0.35747067181350667 1.0 ['ENSG00000187775|ENST00000389840|DNAH17'] 87609 5898 QTSQVLTAV True PC9_epitope_Rep4 945.5131106231698 945.51200993586 29.587 2 -1.1789740744267352 0.35747875069154555 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 30390 8856 GAEVVRKNL True PC9_epitope_Rep4 984.5716285587998 984.57052993586 41.597 2 -1.1790632710224687 0.3574823345990394 1.0 ['ENST00000509552.5_1_6:31112443-31124902:-|nuORF', 'nc|ENSG00000204536|Q8TD31|CCHCR1', 'ENSG00000204536|ENST00000396268|CCHCR1', 'nc|ENSG00000204536|Q8TD31-3|CCHCR1', 'ENST00000464012.1_1_6:31118734-31122515:-|nuORF'] 122556 8441 VGTARPDEK True H1975_Epitope_Rep3 971.5036085686299 971.50250993586 37.454 2 -1.1791044722383535 0.3574823345990394 1.0 ['nc|ENSG00000072110|P12814-4|ACTN1', 'nc|ENSG00000072110|P12814-2|ACTN1', 'nc|ENSG00000072110|P12814|ACTN1', 'ENSG00000072110|ENST00000394419|ACTN1', 'ENST00000554508.5_1_14:69367621-69387744:-|nuORF'] 16326 7419 EEKDIHEELPK True NCI_RA007_Epitope_Rep2 1365.6776097489699 1365.6765099358602 33.484 2 -1.1794023746648055 0.3575784245929465 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3'] 32383 9114 GGFGFLPC True H1975_Epitope_Rep2 796.3577962820799 796.35668993586 40.009 2 -1.1795511381419241 0.35761164755582375 1.0 ['GRXCR1|p.C264Lfs*16|1|0.23|ENSG00000215203|chr4:43030456-43030457|-/T|frameshift_variant', 'ENSG00000215203|ENST00000399770|GRXCR1'] 114495 24755 TSFLSMWLS True H1975_Epitope_Rep1 1070.5106680950198 1070.50956993586 102.54 2 -1.1796210405971832 0.3576188081468444 1.0 ['nc|ENSG00000158296|Q8WWT9-3|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-6|SLC13A3', 'ENSG00000158296|ENST00000279027|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-2|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-4|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-5|SLC13A3'] 57388 8092 LEHPQRRP True H1975_Epitope_Rep3 1031.5624608574299 1031.56136993586 36.1 2 -1.1796281693957915 0.3576188081468444 1.0 ['ENSG00000173653|ENST00000309657|RCE1', 'ENST00000533277.5_1_11:66613305-66613563:+|nuORF', 'RCE1|p.A274V|1|0.19|ENSG00000173653|chr11:66845926-66845926|C/T|missense_variant'] 43896 16154 ILDLMLTSYT True PC9_epitope_Rep1 1168.60496240268 1168.60330490379 66.951 3 -1.1796391833796724 0.3576188081468444 1.0 ['ABCD2|p.V235L|2|0.2|ENSG00000173208|chr12:39618913-39618913|C/A|missense_variant'] 92898 6411 RRNTPYWYFLQ True NCI_RA007_Epitope_Rep1 1542.7731818996597 1542.7715249037901 28.962 3 -1.1796478005296067 0.3576188081468444 1.0 ['ENSG00000106246|ENST00000292478|PTCD1', 'ENST00000485746.1_1_7:99030561-99032532:-|nuORF'] 136970 25542 YKKKINPIK True PC9_epitope_Rep1 1130.7175645164998 1130.71646993586 103.25 2 -1.1797377911121367 0.35765111133460725 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 33644 12831 GLNRLPTPSP True NCI_RA007_Epitope_Rep1 1050.5821932425 1050.58108993586 53.9 2 -1.1797530890514825 0.35765111133460725 1.0 ['nc|ENSG00000185920|Q13635-4|PTCH1', 'nc|ENSG00000185920|Q13635-3|PTCH1', 'nc|ENSG00000185920|Q13635-2|PTCH1', 'ENSG00000185920|ENST00000331920|PTCH1'] 130974 16424 VVKESSADLLL True PC9_epitope_Rep4 1172.66525416012 1172.66414993586 71.136 2 -1.1797806035056864 0.35765111133460725 1.0 ['ENSG00000171467|ENST00000361428|ZNF318'] 83635 17880 QDYQTWLD True PC9_epitope_Rep3 1067.45598966987 1067.4554749679298 73.975 1 -1.1797960488513108 0.35765111133460725 1.0 ['ENSG00000115825|ENST00000234179|PRKD3', 'ENSG00000184304|ENST00000331968|PRKD1'] 44296 5351 ILWRVLRPECL True NCI_RA007_Epitope_Rep2 1396.8013112238 1396.79965490379 25.433 3 -1.1799495601014296 0.3577175470796772 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000533635.5_1_11:6587803-6591461:+|nuORF', 'ENST00000525883.5_1_11:6587352-6591461:+|nuORF', 'ENST00000529821.5_1_11:6587803-6593213:+|nuORF', 'ENST00000530197.5_1_11:6587352-6593213:+|nuORF'] 85938 20362 QNYVLKWDYTY True H1975_Epitope_Rep1 1491.7034305739899 1491.70232993586 84.689 2 -1.1799685442998336 0.3577175470796772 1.0 ['nc|ENSG00000142166|P17181-2|IFNAR1', 'nc|ENSG00000142166|P17181-4|IFNAR1', 'nc|ENSG00000142166|P17181-3|IFNAR1', 'ENSG00000142166|ENST00000270139|IFNAR1'] 97510 8816 SGPPLKAG True PC9_epitope_Rep5 725.40718900265 725.4066449679301 38.855 1 -1.1800027017469252 0.3577247014456317 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000508497.5_1_4:17579055-17583440:+|nuORF', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 75101 1414 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 7.8232 3 -1.1800741030287585 0.3577247014456317 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 125306 20512 VLRSWWPRWWW True NCI_RA007_Epitope_Rep2 1656.8466216234397 1656.8455299358602 84.859 2 -1.1800879997034668 0.3577247014456317 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 41290 6830 IAGRYEFSN True PC9_epitope_Rep3 1055.50360856863 1055.5025099358602 31.287 2 -1.1800884796039504 0.3577247014456317 1.0 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1', 'ENSG00000111713|ENST00000261195|GYS2', 'GYS2|p.S526Vfs*2|1|0.18|ENSG00000111713|chr12:21542566-21542566|G/-|frameshift_variant'] 65899 8393 LSLEPPWACL True NCI_RA007_Epitope_Rep1 1127.5685173243098 1127.56740993586 36.648 2 -1.1801655096825145 0.35774084875301687 1.0 ['ENST00000294785.9_1_1:160328057-160328183:+|nuORF'] 110791 3992 TKQLGAHL True NCI_RA007_Epitope_Rep4 866.4974009893799 866.49630993586 21.607 2 -1.1802239571047806 0.35774084875301687 1.0 ['ENST00000296885.7_1_6:88117749-88144792:+|nuORF', 'ENSG00000272514|ENST00000369562|CFAP206', 'ENST00000489338.6_1_6:88125312-88173965:+|nuORF'] 62046 11153 LLLVVLTPPPT True NCI_RA007_Epitope_Rep4 1161.7372969015698 1161.73564490379 49.774 3 -1.1802342727455815 0.35774708078281525 1.0 ['nc|ENSG00000107821|Q96I82-2|KAZALD1', 'ENSG00000107821|ENST00000370200|KAZALD1'] 22558 17599 ETLRYKDRRL True NCI_RA007_Epitope_Rep2 1348.7575318355198 1348.75642993586 73.195 2 -1.180237559252151 0.35774708078281525 1.0 ['nc|ENSG00000168959|P41594-3|GRM5', 'ENSG00000168959|ENST00000305447|GRM5'] 796 8542 ACGCDCDC True PC9_epitope_Rep3 788.15976737548 788.1592149679301 37.812 1 -1.1802379861300694 0.35774708078281525 1.0 ['ENST00000451025.6_2_6:43608345-43608465:+|nuORF'] 138182 5874 YQQHLWKSWDP True PC9_epitope_Rep5 1486.6993482530597 1486.69771490379 27.586 3 -1.180244008198844 0.35774708078281525 1.0 ['ENST00000503280.5_1_4:9800851-9909967:-|nuORF'] 83889 7187 QEIEKEIHDIE True H1975_Epitope_Rep1 1381.6725243685298 1381.67142993586 32.664 2 -1.180270486360992 0.35774708078281525 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611', 'nc|ENSG00000189190|Q6ZNG1|ZNF600', 'ENSG00000189190|ENST00000692063|ZNF600'] 58920 8967 LFVIVDDP True H1975_Epitope_Rep3 916.4905842734399 916.48948993586 39.488 2 -1.1802893289929133 0.35774708078281525 1.0 ['ENSG00000148158|ENST00000374232|SNX30'] 17079 11657 EGQNKVSDLC True H1975_Epitope_Rep3 1091.49172355559 1091.4906299358602 49.974 2 -1.180303233998866 0.35774708078281525 1.0 ['ENSG00000198796|ENST00000361673|ALPK2', 'ALPK2|p.I1792Nfs*4|1|0.28|ENSG00000198796|chr18:58529217-58529218|-/T|frameshift_variant', 'ALPK2|p.G1434Vfs*29|1|0.39|ENSG00000198796|chr18:58535886-58535886|C/-|frameshift_variant'] 59029 10409 LGARFRRVP True NCI_RA007_Epitope_Rep4 1070.6461309117399 1070.64502993586 46.891 2 -1.1803599448549553 0.35775872904150224 1.0 ['ENST00000389262.8_1_22:19048277-19109719:-|nuORF'] 5133 4518 ALMVLEAYQK True H1975_Epitope_Rep3 1164.62128117316 1164.62018993586 22.499 2 -1.1803773490785998 0.35775872904150224 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF'] 77938 24250 PAKAKLTKLKM True NCI_RA007_Epitope_Rep2 1227.77369949363 1227.7720649037901 101.84 3 -1.1803965469030329 0.35775872904150224 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'AFF1|p.P608Tfs*61|1|0.22|ENSG00000172493|chr4:87114669-87114670|-/A|frameshift_variant', 'ENST00000504956.5_1_4:87856214-87968836:+|nuORF'] 62453 17521 LLSKPMLPEAT True H1975_Epitope_Rep1 1198.6631459851399 1198.66204993586 72.894 2 -1.18045356637936 0.3577623045598512 1.0 ['NLRP8|p.T323P|2|0.37|ENSG00000179709|chr19:55955025-55955025|A/C|missense_variant'] 74927 11350 NLSSIQQKL True PC9_epitope_Rep1 1029.5818588893299 1029.5807699358602 48.536 2 -1.1804539372581953 0.3577623045598512 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 55422 7660 LATKMEYFYWR True H1975_Epitope_Rep1 1506.7329568804598 1506.73184993586 34.439 2 -1.1805662507568566 0.3578080814428455 1.0 ['ENST00000496711.5_1_9:130118742-130126953:+|nuORF'] 63038 17315 LNKDPSFRP True PC9_epitope_Rep2 1072.56654317836 1072.5654499358602 71.86 2 -1.1805926526944899 0.3578152295491963 1.0 ['nc|ENSG00000134602|Q9P289-2|STK26', 'ENSG00000134602|ENST00000394334|STK26'] 19910 15071 ELWVRDSP True PC9_epitope_Rep2 1000.4977949121999 1000.49668993586 63.229 2 -1.1806006563298468 0.3578152295491963 1.0 ['nc|ENSG00000137757|P51878-3|CASP5', 'nc|ENSG00000137757|P51878-6|CASP5', 'nc|ENSG00000137757|P51878-2|CASP5', 'ENSG00000137757|ENST00000260315|CASP5', 'nc|ENSG00000137757|P51878-5|CASP5', 'CASP5|p.G321W|1|0.22|ENSG00000137757|chr11:104999020-104999020|C/A|missense_variant', 'CASP4|p.G264W|1|0.11|ENSG00000196954|chr11:104948668-104948668|C/A|missense_variant', 'ENSG00000196954|ENST00000444739|CASP4', 'nc|ENSG00000196954|P49662-2|CASP4'] 90515 10655 RKDGPLDMRMD True PC9_epitope_Rep5 1332.62784018892 1332.62674993586 45.973 2 -1.1806040826611182 0.3578152295491963 1.0 ['nc|ENSG00000169519|A6NJ78-2|METTL15', 'nc|ENSG00000169519|A6NJ78-4|METTL15', 'ENSG00000169519|ENST00000407364|METTL15'] 91421 18210 RNKTTYKV True NCI_RA007_Epitope_Rep1 1008.5716285587998 1008.57052993586 74.976 2 -1.180611259836921 0.3578152295491963 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 7659 13855 ASNFQWLL True PC9_epitope_Rep4 977.4970666362099 977.49596993586 61.194 2 -1.1806346232409601 0.3578223769369007 1.0 ['ENSG00000113594|ENST00000453190|LIFR', 'ENST00000503088.1_1_5:38490841-38530749:-|nuORF', 'ENST00000512723.1_1_5:38528826-38530749:-|nuORF'] 31640 7729 GEHFLFMY True H1975_Epitope_Rep3 1042.45823859934 1042.4571499358601 34.712 2 -1.1807321243844082 0.3578223769369007 1.0 ['ENSG00000105538|ENST00000222145|RASIP1'] 18949 16651 ELFFTKQY True PC9_epitope_Rep6 1074.53859709502 1074.53750993586 76.517 2 -1.1807327714470839 0.3578223769369007 1.0 ['ENST00000310015.10_1_2:174771195-174771288:-|nuORF'] 92729 24683 RRKKKRKKLCQ True H1975_Epitope_Rep1 1470.94053909162 1470.93889490379 102.26 3 -1.1807602186462567 0.3578223769369007 1.0 ['ENSG00000170396|ENST00000302277|ZNF804A', 'ZNF804A|p.P1071Qfs*25|1|0.28|ENSG00000170396|chr2:184938607-184938607|C/-|frameshift_variant'] 88100 2624 QVVYYSEMHK True NCI_RA007_Epitope_Rep5 1282.60160835774 1282.59997490379 14.78 3 -1.180799192904073 0.35783044713097245 1.0 ['nc|ENSG00000147439|Q9NQY0-2|BIN3', 'ENSG00000147439|ENST00000276416|BIN3'] 68609 8242 LTYSNPSYR True H1975_Epitope_Rep2 1099.52982331647 1099.5287299358602 36.656 2 -1.180885873448768 0.35785108388312914 1.0 ['ENSG00000134569|ENST00000378623|LRP4'] 29572 14046 FVIRHVHP True H1975_Epitope_Rep3 1003.5715689891499 1003.57046993586 59.351 2 -1.180929085076856 0.35787886403619 1.0 ['SPATA6|p.D262H|1|0.16|ENSG00000132122|chr1:48395351-48395351|C/G|missense_variant'] 113743 14887 TRDNPEMNPF True NCI_RA007_Epitope_Rep4 1219.52917169347 1219.52806993586 64.725 2 -1.1809368674689158 0.35787886403619 1.0 ['ENST00000240100.6_1_8:29193192-29193309:-|nuORF'] 59977 8127 LHPAPPNGL True PC9_epitope_Rep4 914.49740098938 914.49630993586 38.715 2 -1.1809962305131407 0.35787886403619 1.0 ['nc|ENSG00000119535|Q99062-4|CSF3R'] 108055 7652 TDIDSDDHQVM True H1975_Epitope_Rep3 1274.50849581854 1274.5073899358601 34.415 2 -1.1810117487881537 0.35787886403619 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.G3456Afs*3|1|0.25|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant', 'FRAS1|p.G3729Afs*31|1|0.1|ENSG00000138759|chr4:78537086-78537086|G/-|frameshift_variant', 'ENST00000509802.1_1_4:79369241-79371543:+|nuORF'] 98365 9413 SIHLQRWDKYS True NCI_RA007_Epitope_Rep1 1431.7258973540702 1431.72480993586 40.608 2 -1.1810312774452743 0.35787886403619 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF'] 46384 9785 ITICVCVIEV True H1975_Epitope_Rep3 1090.57663947986 1090.5755499358602 42.662 2 -1.1810517195333188 0.35788693281059547 1.0 ['ENSG00000143119|ENST00000271324|CD53'] 139482 19587 YTGPRLYK True PC9_epitope_Rep2 996.5392658013599 996.53816993586 80.724 2 -1.1811224949281587 0.35789500138222213 1.0 ['ENST00000595692.1_1_19:7679981-7682940:+|nuORF', 'ENSG00000076826|ENST00000160298|CAMSAP3', 'nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3'] 46397 12492 ITIKYSREP True PC9_epitope_Rep1 1105.61315901761 1105.61206993586 52.918 2 -1.181176628511408 0.3579030697510775 1.0 ['nc|ENSG00000286135|A0A494C103|SPADH'] 14489 7395 DTVLSAAAL True PC9_epitope_Rep1 859.4650978015899 859.46400993586 33.258 2 -1.1812975290075975 0.3579900987610886 1.0 ['nc|ENSG00000078618|O43847-2|NRDC'] 85471 22574 QLHGKSDS True H1975_Epitope_Rep2 870.4195445915 870.4184499358599 93.269 2 -1.1812977992207576 0.3579900987610886 1.0 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion', 'CCPG1|p.R563Kfs*79|1|0.19|ENSG00000260916|chr15:55360085-55360085|C/-|frameshift_variant'] 119184 8291 VEKIPQSH True NCI_RA007_Epitope_Rep1 936.5028802926402 936.50178993586 36.251 2 -1.1813107484600194 0.3579900987610886 1.0 ['ENSG00000115365|ENST00000450366|LANCL1'] 13046 12212 DLRDDRDRRGP True NCI_RA007_Epitope_Rep2 1369.68107241997 1369.67996993586 52.101 2 -1.181351581477211 0.35800623209529076 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 119741 18114 VETLTIRR True H1975_Epitope_Rep1 986.58727862294 986.58618993586 75.472 2 -1.1813633896920086 0.35800623209529076 1.0 ['ENSG00000137462|ENST00000642700|TLR2', 'TLR2|p.N414Tfs*2|1|0.56|ENSG00000137462|chr4:153704144-153704144|A/-|frameshift_variant'] 103204 5568 SQQTLDTPK True H1975_Epitope_Rep2 1016.5138388991599 1016.51274993586 26.425 2 -1.1813912699633904 0.35801429845832966 1.0 ['ENSG00000137073|ENST00000379238|UBAP2'] 76431 5321 NSVHFEMKPGV True NCI_RA007_Epitope_Rep5 1243.60194271091 1243.6008499358602 27.159 2 -1.1814478474927546 0.3580510604080812 1.0 ['SORCS1|p.L1073M|1|0.33|ENSG00000108018|chr10:106597399-106597399|G/T|missense_variant'] 129944 16049 VTNDSMHREI True PC9_epitope_Rep5 1200.55572079448 1200.55408490379 66.72 3 -1.1814507941569181 0.3580510604080812 1.0 ['nc|ENSG00000182938|Q7RTS5|OTOP3', 'ENSG00000182938|ENST00000328801|OTOP3'] 125710 9014 VNELIENAQER True NCI_RA007_Epitope_Rep4 1313.6575430107298 1313.65644993586 41.505 2 -1.1815173186496 0.3580510604080812 1.0 ['RNF41|p.H251Q|2|0.21|ENSG00000181852|chr12:56206648-56206648|G/T|missense_variant'] 88527 13237 RAEAEYWYRSK True H1975_Epitope_Rep3 1457.7051619094898 1457.7040699358602 56.171 2 -1.181562225537847 0.3580968175593331 1.0 ['KRT85|p.S312Y|1|0.14|ENSG00000135443|chr12:52363262-52363262|G/T|missense_variant'] 28616 11029 FSRGAEFRNK True PC9_epitope_Rep5 1210.6207040095398 1210.6190549037901 47.412 3 -1.1816511653149224 0.3581407035175879 1.0 ['ENST00000416109.2_1_12:7507704-7520763:-|nuORF'] 120562 18464 VGADMQESRP True PC9_epitope_Rep1 1088.49205790876 1088.4909699358602 75.813 2 -1.1816908509023334 0.3581407035175879 1.0 ['ENSG00000125482|ENST00000334270|TTF1', 'TTF1|p.E302Q|1|0.04|ENSG00000125482|chr9:132401918-132401918|C/G|missense_variant'] 36341 4346 GVHCHGQG True H1975_Epitope_Rep1 793.32895576529 793.32784993586 21.706 2 -1.181744903201964 0.3581407035175879 1.0 ['nc|ENSG00000171121|Q9NPA1-5|KCNMB3', 'nc|ENSG00000171121|Q9NPA1-4|KCNMB3', 'ENSG00000171121|ENST00000392685|KCNMB3', 'nc|ENSG00000171121|Q9NPA1-2|KCNMB3', 'nc|ENSG00000171121|Q9NPA1|KCNMB3'] 116643 20026 TYILRWTVELI True PC9_epitope_Rep3 1405.79693703601 1405.79530490379 82.28 3 -1.1817766335157884 0.3581407035175879 1.0 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 29741 16135 FVQDVPVDVL True PC9_epitope_Rep1 1129.60192562757 1129.60027490379 66.878 3 -1.1817769013964514 0.3581407035175879 1.0 ['nc|ENSG00000090061|O75909-2|CCNK', 'nc|ENSG00000090061|O75909-1|CCNK', 'ENSG00000090061|ENST00000389879|CCNK', 'nc|ENSG00000090061|O75909-4|CCNK', 'ENST00000553865.1_1_14:99968556-99969378:+|nuORF'] 109156 17180 TFPGKSTF True PC9_epitope_Rep1 883.44396843419 883.44286993586 70.904 2 -1.1817957485769444 0.3581407035175879 1.0 ['ENST00000309052.8_1_2:30862994-30863111:+|nuORF'] 25678 13011 FFFFFFFFFGY True H1975_Epitope_Rep2 1561.7110821537294 1561.7099899358602 55.165 2 -1.1818317716990003 0.3581407035175879 1.0 ['ENST00000379731.4_1_9:33111209-33111335:-|nuORF'] 66803 7408 LSVMNIVAK True H1975_Epitope_Rep3 973.5630380210499 973.56194993586 33.472 2 -1.181884905157014 0.35814876697528925 1.0 ['ENST00000470597.5_1_5:64558740-64769500:-|nuORF', 'nc|ENSG00000049192|Q9UKP5-3|ADAMTS6', 'nc|ENSG00000049192|Q9UKP5-2|ADAMTS6', 'ENSG00000049192|ENST00000381055|ADAMTS6'] 117575 16513 VAGLISPWN True PC9_epitope_Rep5 955.51271670035 955.51160993586 68.518 2 -1.1819602872201271 0.3581693927288259 1.0 ['nc|ENSG00000118514|Q9H2A2-2|ALDH8A1', 'ENSG00000118514|ENST00000265605|ALDH8A1'] 47890 9566 IYVAKTKRML True NCI_RA007_Epitope_Rep4 1221.72674930121 1221.72511490379 43.642 3 -1.1820000491501284 0.35817745562353176 1.0 ['ENST00000518026.5_2_8:16122737-16240831:-|nuORF'] 121880 8125 VGPELFVP True NCI_RA007_Epitope_Rep2 856.4694549060399 856.46834993586 36.237 2 -1.1820143528714055 0.35818551831566253 1.0 ['ENST00000375946.8_1_10:27443943-27444111:+|nuORF'] 100930 6892 SLSPEELSSVP True PC9_epitope_Rep5 1143.56593404167 1143.5648299358602 31.479 2 -1.1820567672317603 0.35819714346728304 1.0 ['nc|ENSG00000102854|Q13421-4|MSLN', 'ENSG00000102854|ENST00000545450|MSLN', 'nc|ENSG00000102854|Q13421|MSLN', 'nc|ENSG00000102854|Q13421-2|MSLN'] 60574 24914 LIRITRPP True PC9_epitope_Rep3 964.6181848283999 964.61708993586 101.2 2 -1.1820773481972806 0.35819714346728304 1.0 ['ENST00000481501.1_1_17:27042472-27042902:-|nuORF'] 129346 7682 VTDWPSSIR True NCI_RA007_Epitope_Rep1 1059.53490869691 1059.53380993586 33.875 2 -1.182101767854394 0.35819714346728304 1.0 ['ENST00000416132.5_1_2:3687900-3691705:+|nuORF'] 61365 16072 LLEHLRIHTG True NCI_RA007_Epitope_Rep1 1187.6774906096698 1187.67638993586 66.62 2 -1.1821625356998395 0.3581988318784149 1.0 ['nc|ENSG00000197062|Q16670-2|ZSCAN26', 'nc|ENSG00000197062|Q16670|ZSCAN26', 'ENSG00000197062|ENST00000421553|ZSCAN26'] 7706 8864 ASQQQVEVYKI True H1975_Epitope_Rep1 1291.67721582615 1291.67610993586 39.008 2 -1.1822319288607896 0.3581988318784149 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 55541 5573 LAYHIYHEEFQ True NCI_RA007_Epitope_Rep2 1448.6724647988801 1448.6713699358602 26.293 2 -1.182234067978331 0.3581988318784149 1.0 ['ENSG00000169402|ENST00000404077|RSPH10B2', 'ENSG00000155026|ENST00000404406|RSPH10B', 'nc|ENSG00000169402|B2RC85-2|RSPH10B2'] 122982 10706 VGWSDSYTCEY True PC9_epitope_Rep1 1308.49686850568 1308.4957699358602 46.07 2 -1.1822406979404971 0.3581988318784149 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 79546 22747 PGSIRKPPN True PC9_epitope_Rep4 964.54541381096 964.54430993586 95.715 2 -1.1822638037524484 0.3581988318784149 1.0 ['ENSG00000132478|ENST00000589666|UNK'] 15864 6783 EDLVSFHHRK True H1975_Epitope_Rep1 1266.64691875738 1266.64582993586 31.134 2 -1.1822894899993683 0.3581988318784149 1.0 ['nc|ENSG00000165521|Q05BV3|EML5', 'ENSG00000165521|ENST00000554922|EML5', 'ENST00000553281.5_1_14:89088194-89171927:-|nuORF', 'nc|ENSG00000165521|Q05BV3-2|EML5'] 32264 20742 GFPPLPQHLCS True NCI_RA007_Epitope_Rep4 1194.58556437078 1194.58390490379 89.869 3 -1.1823317333231118 0.3581988318784149 1.0 ['ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant'] 57608 8945 LELNMCIDML True PC9_epitope_Rep3 1193.54943875585 1193.5477949037902 39.355 3 -1.1823736533823068 0.3581988318784149 1.0 ['ENST00000417154.5_1_2:191769812-191769863:+|nuORF'] 75083 1674 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 9.2034 3 -1.1824527446609896 0.35820689308681675 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 78868 11576 PESRSQEPL True PC9_epitope_Rep5 1041.50908787189 1041.50798993586 49.521 2 -1.1824701738458083 0.3582149540927189 1.0 ['ENSG00000179922|ENST00000325351|ZNF784'] 64636 8917 LRFRRQLLYWF True NCI_RA007_Epitope_Rep5 1596.9041364995599 1596.90193987172 40.961 4 -1.18252355857396 0.358223014896129 1.0 ['ENSG00000100979|ENST00000372431|PLTP', 'nc|ENSG00000100979|P55058-4|PLTP', 'nc|ENSG00000100979|P55058-2|PLTP'] 20361 14853 EPIAMTVP True PC9_epitope_Rep3 856.4364405256 856.43534993586 62.268 2 -1.1825524907908462 0.358243635313179 1.0 ['ENSG00000102879|ENST00000219150|CORO1A', 'ENST00000567034.5_1_16:30199450-30200005:+|nuORF'] 22059 8331 ESRTTGPSVL True NCI_RA007_Epitope_Rep5 1045.54038800017 1045.53928993586 38.72 2 -1.1826408951613725 0.35825525608500164 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 131319 4561 VVRDPQGI True NCI_RA007_Epitope_Rep3 882.4923156089399 882.49120993586 24.821 2 -1.1827022596978318 0.35825525608500164 1.0 ['THOC5-LYZ|1|fusion', 'ENSG00000090382|ENST00000261267|LYZ'] 36488 23438 GVKETLLPPPL True PC9_epitope_Rep5 1162.6961603655798 1162.6950699358601 95.138 2 -1.1827086625897147 0.35825525608500164 1.0 ['ENST00000474961.5_1_6:31498060-31498156:-|nuORF'] 75313 12234 NPVAHQKLIHH True NCI_RA007_Epitope_Rep2 1292.71018772028 1292.7090899358602 52.187 2 -1.182737073437769 0.35826331587606597 1.0 ['L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|42|1|sense'] 41304 10654 IAHMKNYIARF True PC9_epitope_Rep4 1362.7230609031 1362.7219699358602 48.73 2 -1.1827932602899434 0.35828393449211293 1.0 ['nc|ENSG00000285292|Q9UG63-2|ABCF2', 'ENSG00000033050|ENST00000287844|ABCF2', 'ENST00000465687.1_1_3:88367275-88367665:+|nuORF'] 44205 6038 ILSGFLYPFP True NCI_RA007_Epitope_Rep2 1152.6219327961599 1152.62082993586 28.091 2 -1.1828128179013047 0.35829199372056514 1.0 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 115223 19652 TVCIFHIL True PC9_epitope_Rep5 944.5153595526399 944.5142699358599 80.648 2 -1.1828464675518209 0.3583457872329737 1.0 ['ENST00000494462.1_1_2:183586783-183593427:+|nuORF'] 131985 19101 VYGIPDPQF True PC9_epitope_Rep6 1034.5072969667397 1034.5061899358602 86.122 2 -1.1828497683366348 0.3583457872329737 1.0 ['nc|ENSG00000198948|O75121-3|MFAP3L', 'ENSG00000198948|ENST00000361618|MFAP3L'] 110304 13063 TIHILVEVK True PC9_epitope_Rep1 1050.6437308698999 1050.6426299358602 55.115 2 -1.1829275442635887 0.3583538453810218 1.0 ['ENST00000499292.2_1_4:36274632-36274905:+|nuORF'] 83405 14923 QAVLRIKSVEA True NCI_RA007_Epitope_Rep4 1212.71902106848 1212.7173749037902 64.865 3 -1.1830100820301657 0.3583870198043426 1.0 ['ENSG00000177476|ENST00000320002|OR2G3'] 123915 25061 VKKATILIS True NCI_RA007_Epitope_Rep5 971.6379172134699 971.63736496793 103.9 1 -1.183061830257304 0.3583986337150894 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2', 'PAPPA2|p.H356N|1|0.2|ENSG00000116183|chr1:176594670-176594670|C/A|missense_variant'] 14631 23378 DVLVDCHC True NCI_RA007_Epitope_Rep2 902.36262396234 902.3620749679301 97.815 1 -1.1830939711480872 0.3583986337150894 1.0 ['ENST00000264607.8_1_2:239355247-239355352:+|nuORF'] 100897 17398 SLSKKRKK True NCI_RA007_Epitope_Rep4 973.63964854897 973.63910496793 75.337 1 -1.1831269881145494 0.3583986337150894 1.0 ['ENSG00000179083|ENST00000683942|FAM133A', 'chrX:93698485-93709317|196|11.33|0.52|4.43|+|ENST00000332647|FAM133A,FAM133A'] 106521 6190 SVVRFDKDERE True H1975_Epitope_Rep1 1378.6840921117398 1378.6829899358602 28.879 2 -1.183144611026615 0.3584021900193385 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 67728 8484 LTGLLVGT True H1975_Epitope_Rep3 772.46945490604 772.46834993586 37.618 2 -1.1831453296878194 0.3584021900193385 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-2|TBC1D8B', 'nc|ENSG00000133138|Q0IIM8-3|TBC1D8B', 'TBC1D9B|p.I268Hfs*21|1|0.15|ENSG00000197226|chr5:179893243-179893244|-/G|frameshift_variant', 'nc|ENSG00000197226|Q66K14|TBC1D9B', 'ENSG00000197226|ENST00000355235|TBC1D9B'] 19606 12335 ELRLLGDELK True H1975_Epitope_Rep1 1184.6764875501597 1184.67538993586 52.476 2 -1.1831580273405053 0.3584102467508005 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 22160 7585 ETAHWKPPP True H1975_Epitope_Rep2 1061.52942939365 1061.52832993586 34.128 2 -1.183172812937724 0.35841830327992363 1.0 ['ENST00000478866.5_1_1:161172175-161179984:+|nuORF', 'nc|ENSG00000158864|O75306-2|NDUFS2', 'ENSG00000158864|ENST00000676972|NDUFS2', 'ENST00000475570.1_1_1:161172175-161173338:+|nuORF'] 134204 3078 WRPKDCKPRWK True NCI_RA007_Epitope_Rep2 1498.7979571788599 1498.79577987172 16.586 4 -1.1832221150316602 0.35842185891157485 1.0 ['ENSG00000118276|ENST00000306851|B4GALT6', 'nc|ENSG00000118276|Q9UBX8-2|B4GALT6'] 111781 10145 TLQSFQFDFI True H1975_Epitope_Rep1 1244.6077392839998 1244.60664993586 43.961 2 -1.1832320102144651 0.35842185891157485 1.0 ['ENSG00000079482|ENST00000355520|OPHN1', 'nc|ENSG00000079482|O60890-2|OPHN1'] 125040 13335 VLPFVFMG True PC9_epitope_Rep6 908.4829967951999 908.48188993586 62.952 2 -1.1833949432853035 0.3585088082771437 1.0 ['ENST00000216297.6_1_14:21820582-21820828:-|nuORF'] 4973 15924 ALIQNYIR True PC9_epitope_Rep3 989.56581490237 989.56470993586 66.399 2 -1.1834222058242092 0.3585088082771437 1.0 ['nc|ENSG00000116852|O75037-3|KIF21B', 'ENSG00000116852|ENST00000461742|KIF21B', 'nc|ENSG00000116852|O75037-2|KIF21B', 'nc|ENSG00000116852|O75037|KIF21B'] 66648 8349 LSSRTEAVSP True PC9_epitope_Rep3 1045.54038800017 1045.53928993586 37.084 2 -1.1834314517833717 0.3585088082771437 1.0 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A'] 12449 20052 DKLVYVRM True PC9_epitope_Rep1 1022.5582869937799 1022.5577749679301 81.956 1 -1.1834730886284053 0.3585374734753839 1.0 ['PPP1R3A|p.E154D|1|0.19|ENSG00000154415|chr7:113918535-113918535|C/A|missense_variant'] 136971 25578 YKKKINPIK True PC9_epitope_Rep1 1130.7175645164998 1130.71646993586 103.4 2 -1.1835016364700155 0.3585374734753839 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 81290 7312 PPQIEHGT True PC9_epitope_Rep5 877.4293809992101 877.42828993586 33.087 2 -1.1836100006517167 0.3585455275978103 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'ENST00000466229.5_1_1:196648727-196709933:+|nuORF'] 28973 11042 FTGAAKGL True PC9_epitope_Rep5 763.42283906679 763.42174993586 47.461 2 -1.1836510446024475 0.3585571333509109 1.0 ['RASSF8|p.G135A|1|0.24|ENSG00000123094|chr12:26064798-26064798|G/C|missense_variant'] 83853 6792 QEGLLQEGEEW True H1975_Epitope_Rep1 1316.5884603913996 1316.5873699358601 31.17 2 -1.1836801564230282 0.3585571333509109 1.0 ['ENST00000354532.7_1_19:42410900-42411408:+|nuORF'] 85336 19149 QLCPRCDLSC True PC9_epitope_Rep1 1136.47767079792 1136.4765699358602 78.45 2 -1.1837080777181328 0.3585571333509109 1.0 ['ENST00000292377.3_1_7:99774686-99774926:-|nuORF'] 116114 13084 TVSPQFLIDKN True H1975_Epitope_Rep3 1260.6714021697198 1260.6703099358601 55.57 2 -1.1837874133790547 0.35856068500546145 1.0 ['ENST00000588919.5_1_19:1105807-1106568:+|nuORF'] 128445 15533 VSEMMLSLDL True PC9_epitope_Rep2 1136.5457332744 1136.54462993586 65.021 2 -1.183790168860644 0.35856068500546145 1.0 ['chr7:56011869-56021073|118|23.34|0.57|5.37|-|1|PSPH,PSPH|1'] 31168 11713 GDEPGRPRSR True NCI_RA007_Epitope_Rep1 1125.56391740941 1125.56282993586 49.537 2 -1.1838298683813615 0.35856873822975516 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 129500 23468 VTFAFSCT True H1975_Epitope_Rep3 874.38949033318 874.38894496793 97.939 1 -1.1839063866381867 0.358601900792206 1.0 ['nc|ENSG00000188092|B7ZAQ6-4|GPR89A', 'ENST00000532574.5_1_1:145811866-145826998:-|nuORF', 'ENST00000478307.5_1_1:147400580-147440603:+|nuORF', 'nc|ENSG00000188092|B7ZAQ6-3|GPR89A', 'ENSG00000188092|ENST00000314163|GPR89B', 'ENSG00000117262|ENST00000313835|GPR89A'] 61935 18580 LLLLWGSC True PC9_epitope_Rep4 903.48881045163 903.48770993586 79.544 2 -1.1839469280682993 0.35860995329684126 1.0 ['nc|ENSG00000143839|P00797-2|REN', 'ENSG00000143839|ENST00000272190|REN'] 60669 6327 LITWYPLFWI True H1975_Epitope_Rep1 1350.7376312547399 1350.73597490379 29.402 3 -1.1839588870065352 0.3586180055992869 1.0 ['ENST00000358812.8_1_6:96044648-96044717:+|nuORF'] 109159 23284 TFPTRGTW True PC9_epitope_Rep2 964.4766655447999 964.47556993586 95.045 2 -1.1840371198307995 0.3586386119968865 1.0 ['ENST00000563209.1_1_16:58545213-58545477:+|nuORF'] 124016 23790 VKLLLPAAP True NCI_RA007_Epitope_Rep3 920.6058888091999 920.60478993586 103.11 2 -1.1841210831642788 0.358659217877095 1.0 ['nc|ENSG00000197150|Q9NUT2-4|ABCB8', 'ENST00000358849.8_1_7:150725553-150730697:+|nuORF', 'ENST00000297504.10_1_7:150725553-150728339:+|nuORF', 'ENST00000462605.5_1_7:150725553-150729984:+|nuORF', 'ENST00000461373.5_1_7:150725553-150725944:+|nuORF', 'ENST00000466514.5_1_7:150725553-150731828:+|nuORF'] 112894 28266 TPPRKRKKIVV True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 118.07 3 -1.1841669211884938 0.3586627666118483 1.0 ['ENST00000563306.5_1_16:46729840-46730008:+|nuORF', 'ENST00000567000.2_1_16:46729456-46731494:+|nuORF', 'ENST00000575571.5_1_16:46728976-46731494:+|nuORF', 'ENSG00000091651|ENST00000219097|ORC6'] 27794 6333 FQEGM[Oxidation]LEKHE True H1975_Epitope_Rep3 1262.5601378490198 1262.55904993586 29.35 2 -1.1841889034634612 0.3586627666118483 1.0 ['nc|ENSG00000144893|Q86YW9-4|MED12L', 'nc|ENSG00000144893|Q86YW9|MED12L', 'ENSG00000144893|ENST00000687756|MED12L', 'nc|ENSG00000144893|Q86YW9-2|MED12L', 'nc|ENSG00000144893|Q86YW9-3|MED12L'] 136973 25356 YKKKINPIK True PC9_epitope_Rep3 1130.7175645164998 1130.71646993586 102.95 2 -1.1842411307567786 0.3586663151684053 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 75066 24996 NMLIIIAKIY True PC9_epitope_Rep5 1190.70970225474 1190.70860993586 101.31 2 -1.18430197796174 0.3586663151684053 1.0 ['OR13G1|p.L52Cfs*10|1|0.3|ENSG00000197437|chr1:247672889-247672889|G/-|frameshift_variant', 'ENSG00000197437|ENST00000642119|OR13G1'] 115054 6950 TTRPFFMK True NCI_RA007_Epitope_Rep2 1026.5320722459398 1026.5309699358602 31.653 2 -1.1843305742503853 0.3586743660557369 1.0 ['ENSG00000137869|ENST00000396402|CYP19A1', 'CYP19A1|p.T462Ifs*7|1|0.33|ENSG00000137869|chr15:51210934-51210935|TG/-|frameshift_variant', 'nc|ENSG00000137869|P11511-2|CYP19A1'] 137527 9417 YLQPSSVSSM True PC9_epitope_Rep2 1097.50631099057 1097.5052099358602 41.562 2 -1.1844055121558135 0.35869496993509997 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P', 'nc|ENSG00000255298|Q8NG78|OR8G5', 'ENST00000533406.2_1_11:124085485-124086391:+|nuORF', 'nc|ENSG00000255425|P0DMU2|OR8G3P', 'ENSG00000255298|ENST00000641992|OR8G5'] 78734 15708 PEFRYTAGI True PC9_epitope_Rep4 1052.52909504048 1052.5279899358602 68.347 2 -1.1846460089938813 0.3587657854434988 1.0 ['ENSG00000106624|ENST00000223357|AEBP1', 'nc|ENSG00000106624|Q8IUX7-2|AEBP1'] 78892 14338 PEVINYEPI True PC9_epitope_Rep1 1072.54407639828 1072.5429699358601 59.975 2 -1.1846745229840172 0.35878993284378335 1.0 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'nc|ENSG00000065534|Q15746-11|MYLK', 'nc|ENSG00000065534|Q15746-7|MYLK', 'nc|ENSG00000065534|Q15746-9|MYLK'] 38865 13095 HIHRRELFFEM True H1975_Epitope_Rep3 1513.7612373169698 1513.76012993586 55.614 2 -1.1846930059388057 0.35878993284378335 1.0 ['ENST00000353383.5_2_17:17707080-17712749:+|nuORF'] 126195 14608 VPGKVVPL True PC9_epitope_Rep1 807.5218248320699 807.52072993586 61.013 2 -1.1847142474220425 0.35878993284378335 1.0 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 130069 9327 VTQINLRDDKW True NCI_RA007_Epitope_Rep2 1386.7255630009 1386.72446993586 40.888 2 -1.1848249707216287 0.3587979815730676 1.0 ['nc|ENSG00000184719|Q5VYX0-2|RNLS', 'ENSG00000184719|ENST00000331772|RNLS'] 53555 15764 KVRFLKLKK True NCI_RA007_Epitope_Rep4 1158.7964835435398 1158.79483490379 68.461 3 -1.1848790920074883 0.3588140784254657 1.0 ['nc|ENSG00000154258|Q8IUA7-4|ABCA9', 'nc|ENSG00000154258|Q8IUA7-3|ABCA9', 'ENSG00000154258|ENST00000340001|ABCA9'] 63938 7603 LPWRQNSWKGY True PC9_epitope_Rep5 1433.7204180508097 1433.71876490379 34.194 3 -1.1848800898696812 0.3588140784254657 1.0 ['nc|ENSG00000175175|Q8WY54-3|PPM1E', 'ENSG00000175175|ENST00000308249|PPM1E'] 45754 8075 ISNEILPYA True H1975_Epitope_Rep3 1018.53351171458 1018.53240993586 36.034 2 -1.1849044576023975 0.3588221265485948 1.0 ['ENST00000547095.5_1_12:62864501-62986526:+|nuORF', 'nc|ENSG00000061987|Q7Z3U7-3|MON2', 'ENST00000551307.5_1_12:62954224-62986526:+|nuORF', 'nc|ENSG00000061987|Q7Z3U7-2|MON2', 'nc|ENSG00000061987|Q7Z3U7-6|MON2', 'nc|ENSG00000061987|Q7Z3U7-5|MON2', 'ENSG00000061987|ENST00000393630|MON2'] 130522 23747 VTWKIKLR True NCI_RA007_Epitope_Rep4 1042.6651350208197 1042.66402993586 102.96 2 -1.1850207932887307 0.35882471069608657 1.0 ['ENSG00000256188|ENST00000539585|TAS2R30', 'ENSG00000212124|ENST00000390673|TAS2R19', 'ENSG00000255837|ENST00000538986|TAS2R20'] 123142 12662 VHEAVVSL True PC9_epitope_Rep5 852.4705175352 852.46942993586 53.709 2 -1.1850336237357437 0.35882471069608657 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 132346 5176 VYLSPFMCP True PC9_epitope_Rep1 1055.48201081903 1055.4809099358602 24.762 2 -1.1850383600745071 0.35882471069608657 1.0 ['ENST00000600118.5_1_19:59065674-59065809:-|nuORF'] 112604 9505 TPASRFQISI True PC9_epitope_Rep5 1118.6084079903399 1118.60730993586 41.517 2 -1.1850642445188415 0.35882471069608657 1.0 ['chr11:65172001-65172246|138|12.34|0.43|4.84|+|1|SPDYC,SPDYC|1'] 81809 15646 PSFPRCVRTRL True H1975_Epitope_Rep3 1330.7292089127 1330.7281099358602 65.599 2 -1.185066497916148 0.35882471069608657 1.0 ['ENST00000448129.1_1_3:12920486-12926576:-|nuORF'] 7534 16199 ASEYPLSEP True H1975_Epitope_Rep2 991.44984166027 991.4492949679301 67.518 1 -1.1851730799511566 0.3588263346803544 1.0 ['ENST00000463209.1_1_10:81841489-81845995:+|nuORF', 'ENST00000483732.5_1_10:81841456-81850558:+|nuORF'] 79836 26115 PIFPWYAFQL True NCI_RA007_Epitope_Rep5 1280.65938093404 1280.65828993586 108.03 2 -1.1852036382593079 0.3588263346803544 1.0 ['ENST00000378088.1_1_9:35737475-35737712:-|nuORF'] 15564 6975 EATASKVIV True H1975_Epitope_Rep3 916.52294703088 916.52184993586 31.791 2 -1.1852074125980694 0.3588263346803544 1.0 ['ENSG00000132182|ENST00000254508|NUP210'] 100939 11564 SLSPSQPL True PC9_epitope_Rep3 827.43888305375 827.43778993586 49.494 2 -1.185212410527154 0.3588263346803544 1.0 ['nc|ENSG00000182352|Q96MU5|CD300LD-AS1'] 17094 21910 EGRKRWKRK True H1975_Epitope_Rep2 1242.7421565548996 1242.74050490379 90.597 3 -1.1852405357292344 0.3588263346803544 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 108954 5152 TETVPVMRNSK True H1975_Epitope_Rep2 1260.6496211793199 1260.64798490379 24.894 3 -1.185246221021678 0.3588263346803544 1.0 ['ENSG00000133193|ENST00000405159|FAM104A'] 82229 16910 PTIISAPAAP True PC9_epitope_Rep5 936.5280324113198 936.52748496793 70.058 1 -1.1852734231767417 0.3588263346803544 1.0 ['SUGP1|p.P365S|1|0.3|ENSG00000105705|chr19:19297139-19297139|G/A|missense_variant'] 43999 12295 ILHRMVIHVF True NCI_RA007_Epitope_Rep2 1263.7274180075499 1263.7263299358601 52.426 2 -1.1852752700432911 0.3588263346803544 1.0 ['ENSG00000183735|ENST00000331710|TBK1'] 126837 18526 VPTAAVQASPL True PC9_epitope_Rep4 1052.5866099166 1052.58550993586 79.334 2 -1.185323808648089 0.35883438123564626 1.0 ['ENSG00000216490|ENST00000407280|IFI30'] 18160 12150 EIPAYSRWQDP True H1975_Epitope_Rep3 1360.6411646706 1360.64006993586 51.904 2 -1.185379907683674 0.3588504737403526 1.0 ['ENSG00000187531|ENST00000328666|SIRT7', 'ENST00000572976.5_1_17:79870294-79872532:-|nuORF'] 78934 9863 PFFFFEDYFY True PC9_epitope_Rep3 1420.6015912743997 1420.6004899358602 42.898 2 -1.185382264391764 0.3588504737403526 1.0 ['ENST00000545576.1_1_12:8756882-8757648:-|nuORF'] 12098 21293 DIFLNVYDI True PC9_epitope_Rep1 1110.5597264624198 1110.5586299358602 86.731 2 -1.1853927362957257 0.3588585196897824 1.0 ['DNAH7|p.V432I|1|0.11|ENSG00000118997|chr2:196000763-196000763|C/T|missense_variant'] 115884 7315 TVPCPRCL True PC9_epitope_Rep5 887.4357293329499 887.43462993586 33.098 2 -1.1854907095497769 0.3588791145356206 1.0 ['ENST00000537834.5_1_19:40771213-40785028:-|nuORF', 'ENST00000452077.5_2_19:40771216-40790860:-|nuORF'] 112893 25510 TPPRKRKKIVV True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 105.73 3 -1.1855005004292336 0.35888715992370246 1.0 ['ENST00000563306.5_1_16:46729840-46730008:+|nuORF', 'ENST00000567000.2_1_16:46729456-46731494:+|nuORF', 'ENST00000575571.5_1_16:46728976-46731494:+|nuORF', 'ENSG00000091651|ENST00000219097|ORC6'] 84392 6442 QGEGEEAMKDM True NCI_RA007_Epitope_Rep5 1223.47983854255 1223.4781949037902 31.447 3 -1.1855214462183605 0.3589077538932601 1.0 ['ENSG00000151320|ENST00000280979|AKAP6', 'AKAP6|p.V325Gfs*18|1|0.11|ENSG00000151320|chr14:32545621-32545622|-/G|frameshift_variant', 'nc|ENSG00000151320|Q13023-2|AKAP6', 'ENST00000556037.1_1_14:32902699-32903038:+|nuORF', 'ENST00000554449.1_1_14:32902699-32907897:+|nuORF'] 56642 20041 LEAAEFLERRE True H1975_Epitope_Rep3 1361.69392851945 1361.6928299358601 83.879 2 -1.1856723734387313 0.35893188776790647 1.0 ['ENST00000460667.5_1_10:111985902-112004616:+|nuORF', 'nc|ENSG00000119950|P50539|MXI1'] 42132 4822 IEEQWEDFC True H1975_Epitope_Rep2 1197.46484010141 1197.46374993586 23.639 2 -1.1856783239859223 0.35893188776790647 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 85645 17675 QLQELPFTP True PC9_epitope_Rep5 1071.5600608155898 1071.5589699358602 73.002 2 -1.185704030225867 0.35893188776790647 1.0 ['ENSG00000131697|ENST00000378156|NPHP4', 'nc|ENSG00000131697|O75161-2|NPHP4'] 129785 21524 VTKRTRSL True PC9_epitope_Rep6 959.5876129761099 959.58650993586 95.664 2 -1.185832709169613 0.35895248014254705 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 121879 17117 VGPEGAFLPP True PC9_epitope_Rep3 982.5123823471799 982.51128993586 70.994 2 -1.185846647462388 0.3589730720004015 1.0 ['nc|ENSG00000100299|P15289-2|ARSA', 'nc|ENSG00000100299|P15289|ARSA', 'ENSG00000100299|ENST00000216124|ARSA', 'ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 68079 9680 LTPAQPPVRPA True PC9_epitope_Rep5 1145.65569253593 1145.65458993586 42.202 2 -1.1858653660557312 0.3589766111222646 1.0 ['ENST00000486149.2_1_6:30954274-30955276:+|nuORF'] 115647 12494 TVKDNSLL True NCI_RA007_Epitope_Rep4 888.4916469026 888.49054993586 55.07 2 -1.1858691607996628 0.3589766111222646 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4'] 57268 12706 LEGDLIILRN True H1975_Epitope_Rep3 1154.6659228664598 1154.66482993586 54.084 2 -1.185904758009234 0.358980150066501 1.0 ['ENST00000483721.1_1_2:99786008-99786047:-|nuORF'] 80119 18730 PKGVSRKLDRL True NCI_RA007_Epitope_Rep3 1267.77245362367 1267.7713499358601 81.906 2 -1.1859085567469976 0.358980150066501 1.0 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 107898 17021 TAVDTAVYYC True PC9_epitope_Rep3 1104.47976188956 1104.4786699358601 70.626 2 -1.1859571804696436 0.3590007402853235 1.0 ['nc|ENSG00000211952|A0A0C4DH34|IGHV4-28'] 27580 24241 FPRKLVQR True PC9_epitope_Rep2 1042.6399829021398 1042.63888993586 98.783 2 -1.1861147716745668 0.359018100171845 1.0 ['ENST00000555858.1_1_14:64902319-64905932:+|nuORF'] 120760 21791 VGAWVLVL True PC9_epitope_Rep1 855.5218248320699 855.52072993586 88.64 2 -1.1861444173936964 0.359018100171845 1.0 ['nc|ENSG00000204305|Q15109-3|AGER', 'nc|ENSG00000204305|Q15109-4|AGER', 'nc|ENSG00000204305|Q15109-10|AGER', 'nc|ENSG00000204305|Q15109-7|AGER', 'ENSG00000204305|ENST00000375076|AGER', 'nc|ENSG00000204305|Q15109-6|AGER', 'nc|ENSG00000204305|Q15109-5|AGER', 'nc|ENSG00000204305|Q15109-8|AGER', 'nc|ENSG00000204305|Q15109-2|AGER', 'nc|ENSG00000204305|Q15109-9|AGER'] 117309 14228 VAAGAILGWP True PC9_epitope_Rep2 953.5334521449299 953.53234993586 59.995 2 -1.1861483864851416 0.359018100171845 1.0 ['nc|ENSG00000086848|Q9H6U8|ALG9', 'ENSG00000086848|ENST00000616540|ALG9', 'nc|ENSG00000086848|Q9H6U8-2|ALG9', 'nc|ENSG00000086848|Q9H6U8-4|ALG9', 'ENST00000530851.6_1_11:111724165-111739381:-|nuORF'] 3672 16721 AGRMPGQL True PC9_epitope_Rep5 828.4276071773998 828.4265099358599 69.324 2 -1.1861618509112735 0.359018100171845 1.0 ['ENSG00000112992|ENST00000344920|NNT'] 12399 24064 DKEKRIRKY True PC9_epitope_Rep5 1234.7146043943799 1234.7135099358602 97.543 2 -1.1861683418038358 0.359018100171845 1.0 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|38|2|sense'] 5194 9448 ALPPRLECLFP True NCI_RA007_Epitope_Rep1 1254.6794647556198 1254.67836993586 40.744 2 -1.1861956049648423 0.359018100171845 1.0 ['nc|ENSG00000180846|Q8NCQ2|CSNK1G2-AS1'] 93109 22588 RRRPRSQRL True PC9_epitope_Rep4 1223.74355353723 1223.7418949037901 95.116 3 -1.1862406453377297 0.359018100171845 1.0 ['ENST00000457380.5_1_X:46937884-46939716:+|nuORF'] 115178 16136 TVALWRIDP True PC9_epitope_Rep2 1069.59202965021 1069.59092993586 67.325 2 -1.18625098984842 0.359018100171845 1.0 ['DCAF12L2|p.M222I|1|0.16|ENSG00000198354|chrX:126165259-126165259|C/T|missense_variant'] 110946 12970 TLCGGPGR True PC9_epitope_Rep1 759.36975794811 759.36866993586 54.761 2 -1.186269549729896 0.359018100171845 1.0 ['ENST00000496023.1_1_7:4798670-4799378:+|nuORF'] 111682 8994 TLPLPEGF True NCI_RA007_Epitope_Rep3 872.4643695256 872.46326993586 42.476 2 -1.186269890131031 0.359018100171845 1.0 ['ENSG00000102974|ENST00000264010|CTCF', 'ENST00000566078.1_1_16:67644735-67645545:+|nuORF'] 90148 19503 RHAYWPERRRS True PC9_epitope_Rep1 1512.78106124476 1512.7799699358602 79.836 2 -1.1862857099058874 0.359018100171845 1.0 ['ENST00000360240.10_1_3:48130367-48130646:-|nuORF'] 134778 7228 WYFRINYRQFF True NCI_RA007_Epitope_Rep1 1638.8095674083795 1638.8079149037903 32.104 3 -1.1862894197007807 0.359018100171845 1.0 ['ENST00000589184.5_1_17:42266304-42268229:+|nuORF', 'nc|ENSG00000168591|Q71RG4-2|TMUB2', 'ENSG00000168591|ENST00000538716|TMUB2'] 82240 23114 PTKQNLSVSLV True PC9_epitope_Rep3 1184.6764875501601 1184.67484490379 94.175 3 -1.186381572974188 0.359018100171845 1.0 ['ENST00000334398.7_1_X:154721001-154721139:-|nuORF'] 68463 6927 LTVDEGTMK True NCI_RA007_Epitope_Rep1 992.48484727 992.48374993586 30.949 2 -1.1864283040989583 0.359018100171845 1.0 ['ENST00000565097.1_1_16:1872299-1876830:-|nuORF', 'ENST00000569700.5_1_16:1869077-1876788:-|nuORF', 'nc|ENSG00000063854|Q16775-3|HAGH', 'ENSG00000063854|ENST00000397356|HAGH'] 114697 7661 TSSKSLPNFPN True H1975_Epitope_Rep3 1190.59315184902 1190.5920499358601 34.449 2 -1.1864460257619722 0.359018100171845 1.0 ['ENSG00000164530|ENST00000373674|PI16'] 24398 20871 FAFKISPK True PC9_epitope_Rep2 936.5432885526399 936.54218993586 85.723 2 -1.1864821888632378 0.359018100171845 1.0 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 96669 19048 SENQIQPQS True PC9_epitope_Rep1 1029.47270236317 1029.4716099358602 78.059 2 -1.1865153978251075 0.359018100171845 1.0 ['nc|ENSG00000168491|Q8TBZ0-2|CCDC110', 'ENSG00000168491|ENST00000307588|CCDC110'] 77847 24311 PAGGLSVSRKE True PC9_epitope_Rep1 1099.59857158263 1099.59797496793 98.341 1 -1.186555759929382 0.359018100171845 1.0 ['ENSG00000186212|ENST00000334306|SOWAHB'] 92355 23630 RQPLRWGWR True NCI_RA007_Epitope_Rep4 1253.6893927060498 1253.6877449037902 102.49 3 -1.1865971988685358 0.359018100171845 1.0 ['ENST00000279392.7_1_16:30007232-30007604:-|nuORF'] 110414 7432 TIMRWFRR True H1975_Epitope_Rep1 1164.63385197588 1164.6327499358601 33.592 2 -1.1866084432128188 0.359018100171845 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'ENST00000483585.5_1_7:45002340-45005995:-|nuORF', 'ENST00000463516.5_1_7:45003626-45005995:-|nuORF'] 97115 6250 SFDWSMDAVP True NCI_RA007_Epitope_Rep4 1153.47501086229 1153.47337490379 30.646 3 -1.1866457951543228 0.359018100171845 1.0 ['ENSG00000179104|ENST00000321196|TMTC2', 'ENST00000551915.5_1_12:83081308-83379891:+|nuORF'] 79179 17531 PGEESLHG True PC9_epitope_Rep3 824.36644638948 824.36534993586 72.617 2 -1.1866662590732706 0.359018100171845 1.0 ['IDO2|p.G161E|1|0.33|ENSG00000188676|chr8:39987903-39987903|G/A|missense_variant'] 125094 26967 VLPGKKKKKT True PC9_epitope_Rep1 1125.75976368165 1125.75811490379 109.86 3 -1.1866721906665707 0.359018100171845 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 51876 19371 KKQQRRSI True PC9_epitope_Rep4 1042.6359601508598 1042.63486993586 82.623 2 -1.1867216806428214 0.359018100171845 1.0 ['nc|ENSG00000147548|Q9BZ95-4|NSD3', 'nc|ENSG00000147548|Q9BZ95-5|NSD3', 'ENSG00000147548|ENST00000317025|NSD3', 'nc|ENSG00000147548|Q9BZ95-3|NSD3', 'WHSC1L1-DDHD2|2|fusion', 'nc|ENSG00000147548|Q9BZ95-2|NSD3', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion', 'WHSC1L1-DDHD2|1|fusion'] 83553 15704 QDQGSKMLL True PC9_epitope_Rep4 1018.5117307241799 1018.51062993586 68.332 2 -1.1868492806613469 0.35902163687676386 1.0 ['ENST00000544140.5_1_11:73555872-73571072:+|nuORF', 'nc|ENSG00000175581|Q96GC5-3|MRPL48', 'ENSG00000175581|ENST00000310614|MRPL48'] 73041 8454 NDISHRLR True H1975_Epitope_Rep1 1009.5417254128499 1009.54062993586 37.447 2 -1.1869073101623802 0.35902163687676386 1.0 ['ENSG00000187135|ENST00000335523|VSTM2B'] 128083 8844 VRRLVKILLLG True NCI_RA007_Epitope_Rep5 1278.8863611770998 1278.8847149037902 40.684 3 -1.1869773991910617 0.3590377162065549 1.0 ['ENSG00000146535|ENST00000275364|GNA12'] 99357 14292 SLDSTISSEA True PC9_epitope_Rep3 1008.46113461996 1008.46002993586 60.061 2 -1.1869897594383505 0.3590377162065549 1.0 ['ENST00000524119.1_1_8:124031540-124034940:-|nuORF'] 78974 20771 PFKIKWFK True H1975_Epitope_Rep2 1092.64842232752 1092.6473299358602 86.01 2 -1.1870308881433473 0.3590402849545979 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant'] 13365 6360 DNDGSTALSIA True PC9_epitope_Rep5 1062.4829326937 1062.48182993586 29.44 2 -1.1870448713709376 0.3590402849545979 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'nc|ENSG00000107104|Q14678-2|KANK1'] 25157 9845 FDRDPEVFR True PC9_epitope_Rep2 1179.5672714543498 1179.56563490379 43.203 3 -1.1870812496708518 0.3590402849545979 1.0 ['KCND3|p.G122Afs*67|1|0.1|ENSG00000171385|chr1:111982362-111982362|C/-|frameshift_variant', 'nc|ENSG00000171385|Q9UK17-2|KCND3', 'ENSG00000171385|ENST00000302127|KCND3'] 62994 12410 LNESHRLHQFF True NCI_RA007_Epitope_Rep1 1426.7105816431 1426.7094899358601 52.248 2 -1.1871094863178613 0.3590402849545979 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1'] 22921 7970 EVFYTALW True H1975_Epitope_Rep3 1027.5014833103098 1027.50038993586 35.628 2 -1.1871377955470939 0.3590402849545979 1.0 ['ENSG00000142197|ENST00000691173|DOP1B', 'nc|ENSG00000142197|Q9Y3R5-2|DOP1B'] 15623 8844 EAVSELIYKSD True H1975_Epitope_Rep3 1252.61869789052 1252.6176099358602 39.024 2 -1.1871760432693748 0.35904735627570983 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 59048 21725 LGCPVPLGVK True PC9_epitope_Rep1 981.5681234014899 981.56702993586 88.396 2 -1.1871893334702264 0.35904735627570983 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 137294 5805 YLGLGPGH True NCI_RA007_Epitope_Rep3 812.41808803952 812.41698993586 29.81 2 -1.1872043194677766 0.35904735627570983 1.0 ['nc|ENSG00000100890|O15091-2|PRORP', 'ENSG00000100890|ENST00000534898|PRORP', 'PRORP|p.Y28Cfs*21|1|0.21|ENSG00000100890|chr14:35123326-35123327|TT/-|frameshift_variant'] 27160 6174 FLSAEISEP True PC9_epitope_Rep2 991.48622716899 991.48512993586 29.139 2 -1.187264443456569 0.35904735627570983 1.0 ['ENST00000234677.6_1_1:109780506-109780617:+|nuORF'] 32191 18012 GFDQYRALL True PC9_epitope_Rep4 1081.55564414149 1081.5545499358602 77.342 2 -1.1872818095861988 0.35905539460977964 1.0 ['nc|ENSG00000161204|Q9NUQ8-2|ABCF3', 'ENSG00000161204|ENST00000429586|ABCF3', 'ENST00000473311.5_1_3:183906074-183911483:+|nuORF', 'ENST00000480539.1_1_3:183911123-183911483:+|nuORF', 'ENST00000468892.5_1_3:183910449-183911483:+|nuORF'] 34783 5566 GQSVYIHL True NCI_RA007_Epitope_Rep4 915.48141657207 915.48030993586 28.011 2 -1.1873186883912272 0.3590589297583366 1.0 ['USP13|p.M90I|1|0.19|ENSG00000058056|chr3:179681979-179681979|G/A|missense_variant'] 19842 13058 ELVELQRWP True PC9_epitope_Rep3 1168.6240580544797 1168.62296993586 55.254 2 -1.1873209229691752 0.3590589297583366 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 20733 10803 EQLAYHHHDW True H1975_Epitope_Rep3 1334.5792331203802 1334.57812993586 46.633 2 -1.187419087782024 0.35906696764484575 1.0 ['nc|ENSG00000073464|P51793-2|CLCN4', 'ENSG00000073464|ENST00000380833|CLCN4'] 67581 9475 LTESPSPDP True H1975_Epitope_Rep3 941.43419159613 941.43364496793 41.449 1 -1.1874549897076183 0.35907500532975506 1.0 ['ENST00000270645.7_1_19:50046533-50046872:+|nuORF'] 19252 11147 ELLGPVPPEQ True NCI_RA007_Epitope_Rep2 1077.57062549929 1077.5695299358601 47.941 2 -1.1875215135364892 0.35908657704654895 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant'] 128542 9309 VSHFPPSTSA True H1975_Epitope_Rep2 1028.4927095317598 1028.4916099358602 40.766 2 -1.187549455474788 0.35908657704654895 1.0 ['ENSG00000164244|ENST00000296666|PRRC1', 'nc|ENSG00000164244|Q96M27-3|PRRC1', 'nc|ENSG00000164244|Q96M27-2|PRRC1', 'nc|ENSG00000164244|Q96M27-4|PRRC1', 'nc|ENSG00000164244|Q96M27-5|PRRC1'] 112975 17000 TPSLAPAPLA True PC9_epitope_Rep3 936.5280324113199 936.52692993586 70.549 2 -1.1875818769863222 0.35908657704654895 1.0 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'ENST00000492173.1_1_1:10718563-10720675:-|nuORF', 'CASZ1|p.I804Yfs*73|1|0.28|ENSG00000130940|chr1:10653648-10653648|G/-|frameshift_variant', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 56081 14614 LDLGAQRERWE True NCI_RA007_Epitope_Rep3 1371.6895118453497 1371.6884099358601 64.83 2 -1.1876021961716845 0.35909461408238763 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 115041 14012 TTPLTIKGK True PC9_epitope_Rep1 957.58588164061 957.58478993586 58.735 2 -1.1876395790696432 0.3590981478927107 1.0 ['nc|ENSG00000075292|Q14966-3|ZNF638', 'ENSG00000075292|ENST00000264447|ZNF638', 'nc|ENSG00000075292|Q14966-2|ZNF638', 'nc|ENSG00000075292|Q14966-6|ZNF638', 'nc|ENSG00000075292|Q14966-4|ZNF638'] 14507 9933 DTYAGRPLPSK True NCI_RA007_Epitope_Rep1 1203.62478633047 1203.62368993586 42.641 2 -1.1876588212264425 0.3590981478927107 1.0 ['nc|ENSG00000101596|A6NHR9-2|SMCHD1', 'ENSG00000101596|ENST00000320876|SMCHD1'] 136883 14035 YIYKDTIQV True PC9_epitope_Rep4 1141.60192562757 1141.60082993586 61.896 2 -1.1877564806492376 0.35910971786833856 1.0 ['ENSG00000183742|ENST00000400331|MACC1'] 7705 8692 ASQQQVEVYKI True H1975_Epitope_Rep1 1291.67721582615 1291.67610993586 38.364 2 -1.1877654050672009 0.35910971786833856 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 31183 16797 GDGFDSQSF True PC9_epitope_Rep2 958.3668403123 958.36629496793 69.857 1 -1.1878160492281877 0.35910971786833856 1.0 ['nc|nan|Q3C1V1-2|C11orf91'] 13933 19927 DRFQRKRRLS True NCI_RA007_Epitope_Rep5 1360.7799986155999 1360.7783549037902 83.563 3 -1.1879242763458384 0.35913832881933994 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 7507 15278 ASEISGFLGQ True PC9_epitope_Rep1 1007.49237517859 1007.49126993586 63.589 2 -1.1879289300225735 0.35913832881933994 1.0 ['nc|ENSG00000185825|P51572-2|BCAP31'] 128661 23128 VSLRRRSRFRR True PC9_epitope_Rep4 1487.9021794369498 1487.90108993586 97.18 2 -1.187957207960319 0.3591589031133625 1.0 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 15264 7299 EAGRLRHRP True H1975_Epitope_Rep2 1090.6108080321799 1090.60970993586 33.013 2 -1.1879613907423205 0.35916243495705596 1.0 ['ENST00000548577.1_17:6915938-6917031:+|nuORF', 'nc|ENSG00000219200|Q6P5S7-2|RNASEK'] 114631 10807 TSPAKTKI True PC9_epitope_Rep6 844.50181766348 844.50072993586 52.413 2 -1.1879664204119578 0.35916243495705596 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 89947 11412 RFWYIEGIMYK True NCI_RA007_Epitope_Rep1 1504.7536923250398 1504.7525899358602 48.356 2 -1.1880521142625085 0.3592080846582075 1.0 ['ENSG00000123684|ENST00000366997|LPGAT1'] 46399 19852 ITINSHTTAGE True PC9_epitope_Rep2 1142.5567663403 1142.5556699358601 81.752 2 -1.1881270628098868 0.35922415306301564 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 97234 20098 SFLQSRGEVI True PC9_epitope_Rep1 1134.6033226098998 1134.6022299358601 82.135 2 -1.1881416875669657 0.35922415306301564 1.0 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2', 'nc|ENSG00000166473|Q7Z442-4|PKD1L2', 'ENST00000299598.11_1_16:81199358-81222588:-|nuORF', 'nc|ENSG00000166473|Q7Z442-3|PKD1L2', 'ENST00000533478.5_1_16:81174978-81214887:-|nuORF', 'nc|ENSG00000166473|Q7Z442-6|PKD1L2'] 68490 9414 LTVHPDPRTPE True H1975_Epitope_Rep3 1260.64625005104 1260.6451499358602 41.212 2 -1.1882015243416448 0.35925726250329115 1.0 ['ENSG00000204291|ENST00000375001|COL15A1'] 127502 20036 VQTTVKRQW True PC9_epitope_Rep6 1144.63529144452 1144.6341899358601 89.736 2 -1.1882314431313428 0.359265295887663 1.0 ['nc|ENSG00000004948|P30988-3|CALCR', 'nc|ENSG00000004948|P30988-4|CALCR', 'ENSG00000004948|ENST00000426151|CALCR', 'nc|ENSG00000004948|P30988-1|CALCR', 'ENST00000423724.5_1_7:93055670-93072938:-|nuORF'] 24293 9224 FAAQAQLLADR True PC9_epitope_Rep4 1202.64077074778 1202.6396699358602 43.077 2 -1.1883538703558005 0.35928586652624717 1.0 119621 14708 VESAVIFRTLY True H1975_Epitope_Rep1 1296.70778767844 1296.7066899358601 61.792 2 -1.1884175638373813 0.3593064366490309 1.0 ['ENSG00000151461|ENST00000357604|UPF2'] 47152 15131 IWNTFFHERYL True PC9_epitope_Rep5 1524.7513838259201 1524.74974490379 63.207 3 -1.1884594835334947 0.35930996439496515 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 63677 24069 LPPQDQRRLL True PC9_epitope_Rep5 1234.7146043943799 1234.71295490379 97.563 3 -1.1884865766083126 0.35930996439496515 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 22419 13091 ETFIRLC[Carbamidomethyl]ERFN True H1975_Epitope_Rep3 1483.7241833813398 1483.7230899358601 55.597 2 -1.1885441012776903 0.35932955571156355 1.0 ['nc|ENSG00000111880|O60942-2|RNGTT', 'ENSG00000111880|ENST00000369485|RNGTT', 'RNGTT|p.N317Ifs*30|1|0.24|ENSG00000111880|chr6:88853711-88853711|T/-|frameshift_variant', 'nc|ENSG00000111880|O60942-3|RNGTT', 'nc|ENSG00000111880|O60942-4|RNGTT'] 48217 8581 KCNQCFREFR True H1975_Epitope_Rep3 1329.6070451746898 1329.60594993586 37.999 2 -1.1885918992265394 0.35932955571156355 1.0 ['nc|ENSG00000130544|Q8N988|ZNF557', 'ENSG00000130544|ENST00000252840|ZNF557'] 119288 10844 VELKPHDVR True PC9_epitope_Rep6 1091.60874234351 1091.60764993586 52.571 2 -1.1887062272107471 0.35932955571156355 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 122989 9785 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 42.591 2 -1.1887166832136833 0.35932955571156355 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 122071 5277 VGRAPKQA True PC9_epitope_Rep4 825.48208527841 825.48098993586 27.002 2 -1.188798299016206 0.3593456186536292 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 122983 12556 VGWSDSYTCEY True PC9_epitope_Rep1 1308.49686850568 1308.4957699358602 53.166 2 -1.188802827269748 0.3593456186536292 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 123435 20678 VIEGQGVEI True PC9_epitope_Rep3 942.5022115862998 942.50110993586 84.811 2 -1.1888633772433403 0.3593867522438951 1.0 ['ENSG00000115364|ENST00000393909|MRPL19'] 12037 7762 DIDKHRRR True H1975_Epitope_Rep1 1094.6057226517398 1094.6046299358602 34.814 2 -1.1888680050521674 0.3593867522438951 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 62598 15590 LLVFFFMFL True PC9_epitope_Rep2 1175.64531109303 1175.64367490379 65.243 3 -1.188899538462517 0.35939478269589964 1.0 ['ENST00000399537.8_1_7:5346469-5346640:-|nuORF'] 136576 17958 YHTEPSFIH True PC9_epitope_Rep4 1129.5192586327698 1129.51762490379 77.129 3 -1.1889084774952905 0.35939830774052023 1.0 ['ENST00000478694.1_1_20:62608437-62611281:-|nuORF'] 133337 10555 WETYLKWWCR True PC9_epitope_Rep1 1469.6914264216498 1469.69032993586 45.491 2 -1.188913476065972 0.35939830774052023 1.0 ['nc|ENSG00000186074|Q8TDQ1-5|CD300LF', 'ENST00000583544.1_1_17:72700560-72709059:-|nuORF', 'nc|ENSG00000186074|Q8TDQ1-3|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-4|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-2|CD300LF', 'ENSG00000186074|ENST00000326165|CD300LF', 'nc|ENSG00000186074|Q8TDQ1-6|CD300LF'] 133370 6459 WFKEEFFHWVN True PC9_epitope_Rep4 1567.7248347249097 1567.72318490379 31.95 3 -1.1890357927497357 0.35943140794223827 1.0 ['ENST00000493324.5_1_3:25778798-25824881:-|nuORF', 'nc|ENSG00000151092|Q96IV0-3|NGLY1', 'nc|ENSG00000151092|Q96IV0-5|NGLY1', 'nc|ENSG00000151092|Q96IV0-2|NGLY1', 'ENSG00000151092|ENST00000280700|NGLY1'] 37362 15353 GVWYKYQPL True PC9_epitope_Rep4 1152.59678067748 1152.59512490379 66.987 3 -1.1891728786528095 0.35943943743184126 1.0 ['ANO4|p.L732Qfs*8|1|0.35|ENSG00000151572|chr12:101110449-101110449|T/-|frameshift_variant', 'nc|ENSG00000151572|Q32M45-2|ANO4', 'ENSG00000151572|ENST00000392977|ANO4'] 103504 13346 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 58.021 2 -1.1893017713092398 0.35951014064027675 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 123737 11379 VIRGGATR True NCI_RA007_Epitope_Rep3 828.49298431528 828.49188993586 51.88 2 -1.189312601367245 0.35951816894170147 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 69697 19164 LVYIAPMHLI True PC9_epitope_Rep6 1168.66783744276 1168.66674993586 86.365 2 -1.1893326201360848 0.35952070590594604 1.0 ['ENST00000452150.6_1_6:131161525-131161600:-|nuORF'] 133723 22810 WLKKILLLL True NCI_RA007_Epitope_Rep3 1138.7841875243398 1138.78308993586 99.156 2 -1.1893518195427284 0.35952070590594604 1.0 ['ENST00000433031.1_1_7:57216973-57217525:-|nuORF'] 41659 13907 IDKESDDVLER True H1975_Epitope_Rep3 1317.6412242402498 1317.6401299358602 58.805 2 -1.189386629982783 0.35952070590594604 1.0 ['TAF5|p.G565Dfs*3|1|0.23|ENSG00000148835|chr10:103385355-103385356|GA/-|frameshift_variant', 'nc|ENSG00000148835|Q15542-2|TAF5', 'ENSG00000148835|ENST00000369839|TAF5'] 7073 10555 AQVWRRVSEH True NCI_RA007_Epitope_Rep2 1266.65815214742 1266.6570499358602 45.654 2 -1.1894281276671754 0.35952070590594604 1.0 ['nc|ENSG00000164808|Q14159-2|SPIDR', 'ENST00000297423.8_1_8:48192559-48196630:+|nuORF'] 74351 16994 NIRGSRFNP True PC9_epitope_Rep3 1059.55737547699 1059.5562699358602 70.527 2 -1.1894315961548272 0.35952070590594604 1.0 ['nc|ENSG00000102893|Q93100-4|PHKB', 'nc|ENSG00000102893|Q93100-2|PHKB', 'nc|ENSG00000102893|Q93100-3|PHKB', 'ENSG00000102893|ENST00000323584|PHKB'] 126735 5086 VPSAGHIP True PC9_epitope_Rep1 776.41808803952 776.41698993586 24.418 2 -1.1895004993771976 0.3595222578704632 1.0 ['ENST00000464989.5_1_2:220308409-220308667:+|nuORF'] 13104 13879 DLSFQLNWRLW True NCI_RA007_Epitope_Rep1 1476.7513838259197 1476.74974490379 58.006 3 -1.1895309673323244 0.3595222578704632 1.0 ['ENST00000341469.6_1_9:100848743-100848965:-|nuORF'] 2718 8207 AETPEALA True H1975_Epitope_Rep3 800.3915985081599 800.39105496793 36.55 1 -1.1895893553130112 0.3595222578704632 1.0 ['ENST00000469587.1_1_1:43919019-43919464:-|nuORF', 'ENST00000372427.5_1_1:43919026-43919464:-|nuORF', 'nc|ENSG00000178922|Q5T013-3|HYI', 'nc|ENSG00000178922|Q5T013|HYI'] 16947 12546 EGEWEPPP True H1975_Epitope_Rep2 939.3974121645898 939.39630993586 53.353 2 -1.1895910996358074 0.3595222578704632 1.0 ['ENST00000308302.3_1_1:204167444-204167576:-|nuORF'] 55715 14883 LDDLLQRLHHN True NCI_RA007_Epitope_Rep1 1372.7211463268 1372.72004993586 61.95 2 -1.1895917756753243 0.3595222578704632 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 133671 24687 WKVGVTAL True PC9_epitope_Rep4 872.51198842436 872.5114349679301 103.45 1 -1.189596221468623 0.3595222578704632 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 79285 9473 PGHRCTLP True NCI_RA007_Epitope_Rep1 879.43850621427 879.43740993586 40.843 2 -1.1896051637219358 0.3595222578704632 1.0 ['ENST00000340573.8_1_11:57319572-57319665:-|nuORF'] 125643 23358 VMKKMLGLR True PC9_epitope_Rep2 1074.6405771490997 1074.63946993586 95.321 2 -1.1896221288024644 0.3595222578704632 1.0 ['ENST00000393104.6_1_10:112641005-112641053:+|nuORF'] 83630 17434 QDYGPCDP True NCI_RA007_Epitope_Rep2 893.3225329721699 893.32142993586 72.552 2 -1.1896226986401321 0.3595257788806176 1.0 ['HRG|p.P421R|2|0.09|ENSG00000113905|chr3:186677567-186677567|C/G|missense_variant', 'ENSG00000113905|ENST00000232003|HRG'] 60806 20966 LKILKLLLLK True PC9_epitope_Rep2 1193.8839015656101 1193.88280993586 86.096 2 -1.1896299943278583 0.3595257788806176 1.0 ['ENST00000349215.7_1_11:18339453-18343686:-|nuORF', 'ENST00000396253.7_1_11:18333561-18343686:-|nuORF'] 115319 5740 TVDRYQAP True NCI_RA007_Epitope_Rep2 948.46649478392 948.46538993586 26.944 2 -1.1897763187605745 0.3595463374898177 1.0 ['ENSG00000119778|ENST00000238789|ATAD2B', 'nc|ENSG00000119778|Q9ULI0-2|ATAD2B'] 58669 20037 LFHWRTRLRRK True H1975_Epitope_Rep1 1567.93241693607 1567.93130993586 83.386 2 -1.189795606931241 0.35955436362724946 1.0 ['ENST00000560110.1_1_15:44968687-44968816:-|nuORF', 'ENST00000558573.1_1_15:44968687-45003294:-|nuORF'] 100363 10048 SLNIDSIFSK True PC9_epitope_Rep2 1122.5920892198599 1122.59098993586 43.975 2 -1.18990657716055 0.35959998496184065 1.0 ['nc|ENSG00000166348|Q70EL1-7|USP54', 'ENSG00000166348|ENST00000687698|USP54', 'nc|ENSG00000166348|Q70EL1-6|USP54', 'ENST00000498143.5_1_10:75279553-75335416:-|nuORF', 'USP54|p.S1440*|1|0.29|ENSG00000166348|chr10:73500821-73500831|CCTCACGTTTG/-|frameshift_variant'] 65631 10723 LSGPVEDAALR True NCI_RA007_Epitope_Rep1 1126.59823722946 1126.5971499358602 45.702 2 -1.1899210683428951 0.35962054186821724 1.0 ['ENST00000378970.4_1_X:30326590-30326719:-|nuORF'] 115596 5162 TVIESSPESPV True H1975_Epitope_Rep3 1143.56593404167 1143.5648299358602 24.958 2 -1.1899494982203438 0.3596285667740197 1.0 ['ENSG00000082516|ENST00000285873|GEMIN5', 'GEMIN5|p.E1125Sfs*36|1|0.24|ENSG00000082516|chr5:154896316-154896316|C/-|frameshift_variant'] 92416 24393 RQRVRKKRS True NCI_RA007_Epitope_Rep5 1212.7639546286398 1212.76231490379 101.3 3 -1.1899804890158203 0.35964912280701755 1.0 ['ENST00000553968.1_1_14:80678377-80678506:-|nuORF'] 15774 9339 EDFEQKYNFRF True PC9_epitope_Rep2 1521.6888431390096 1521.68719490379 41.261 3 -1.1900320511855658 0.3596731952432866 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 67557 16649 LTEQRYTV True PC9_epitope_Rep3 1008.5240096600398 1008.52290993586 69.177 2 -1.19003232580034 0.3596731952432866 1.0 ['ENST00000452408.1_1_6:28937132-28937360:-|nuORF'] 46916 6846 IVKSFSNLMYM True NCI_RA007_Epitope_Rep5 1331.66176608615 1331.66011490379 33.018 3 -1.190037428784435 0.3596731952432866 1.0 ['ENST00000314355.6_1_9:91930203-91931395:+|nuORF'] 57338 6406 LEGSVAIAGAA True NCI_RA007_Epitope_Rep5 957.5131106231698 957.51200993586 31.313 2 -1.1900991057293673 0.35968121898651695 1.0 ['GK2|p.V328A|1|0.75|ENSG00000196475|chr4:79407218-79407218|A/G|missense_variant'] 132675 19283 VYRLIKGRK True PC9_epitope_Rep2 1131.7240468792697 1131.72241490379 79.546 3 -1.1901834696345064 0.35968924252866363 1.0 ['ENSG00000078061|ENST00000377045|ARAF', 'ARAF|p.L176*|1|0.73|ENSG00000078061|chrX:47565315-47565315|C/-|frameshift_variant', 'nc|ENSG00000078061|P10398-2|ARAF'] 18548 5024 EKSWLWHCSQR True H1975_Epitope_Rep1 1458.6826526431 1458.6815499358602 24.396 2 -1.1902493429603704 0.359705289009736 1.0 ['ENST00000577083.1_1_16:4491378-4492529:+|nuORF'] 18906 19424 ELEQFSIWN True PC9_epitope_Rep4 1164.5451390274397 1164.5440499358601 82.827 2 -1.1902527688661897 0.359705289009736 1.0 ['ENSG00000166881|ENST00000300128|NEMP1'] 136733 17170 YIMNRFVI True NCI_RA007_Epitope_Rep5 1054.5633723742199 1054.56226993586 72.817 2 -1.1902780678929887 0.3597088047713917 1.0 ['ENST00000533466.1_1_11:28113029-28116209:-|nuORF'] 41462 6987 IAWRYVPINVV True NCI_RA007_Epitope_Rep2 1328.76049195764 1328.75884490379 31.801 3 -1.190295646561682 0.3597088047713917 1.0 ['nc|ENSG00000100336|Q9BPW4-3|APOL4', 'ENSG00000100336|ENST00000683024|APOL4', 'nc|ENSG00000100336|Q9BPW4|APOL4'] 7758 6868 ASVERSQYPQS True NCI_RA007_Epitope_Rep4 1250.58912909774 1250.58802993586 33.037 2 -1.1903194775198096 0.359711328839552 1.0 ['ARAP2-PDS5A|1|fusion', 'ENSG00000047365|ENST00000303965|ARAP2', 'ARAP2|p.G359Efs*29|2|0.27|ENSG00000047365|chr4:36212453-36212453|C/-|frameshift_variant', 'ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 15251 10796 EAGKRKSSSQP True H1975_Epitope_Rep3 1173.61019889549 1173.60910993586 46.606 2 -1.190320289423293 0.359711328839552 1.0 ['ENSG00000177504|ENST00000317103|VCX2', 'ENSG00000169059|ENST00000381089|VCX3A', 'ENSG00000182583|ENST00000688183|VCX', 'nc|ENSG00000205642|Q9H321-2|VCX3B', 'ENSG00000205642|ENST00000381032|VCX3B'] 20050 7546 ENDKLKEYVK True H1975_Epitope_Rep1 1264.66631678928 1264.66520993586 34.02 2 -1.1903244203066916 0.359711328839552 1.0 ['nc|ENSG00000122417|Q9ULJ1-3|ODF2L', 'nc|ENSG00000122417|Q9ULJ1|ODF2L', 'ENST00000480440.5_1_1:86847891-86851212:-|nuORF', 'nc|ENSG00000122417|Q9ULJ1-6|ODF2L', 'nc|ENSG00000122417|Q9ULJ1-2|ODF2L', 'ENSG00000122417|ENST00000460698|ODF2L', 'nc|ENSG00000122417|Q9ULJ1-5|ODF2L'] 25474 6374 FENLRKFWDLE True NCI_RA007_Epitope_Rep1 1495.74596409231 1495.7443049037902 28.819 3 -1.1903305497380865 0.359711328839552 1.0 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-11|SYTL2', 'nc|ENSG00000137501|Q9HCH5-7|SYTL2', 'nc|ENSG00000137501|Q9HCH5-8|SYTL2'] 132234 4497 VYKRSLTGQAS True NCI_RA007_Epitope_Rep2 1208.65133543148 1208.6496749037901 22.123 3 -1.1903570661373604 0.359711328839552 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-3|ACAD10', 'ENST00000508303.5_1_12:112159488-112186840:+|nuORF'] 61663 23692 LLHLWQPQGAH True PC9_epitope_Rep1 1298.6883896465401 1298.68728993586 95.925 2 -1.190375993009048 0.35972737295780294 1.0 ['ZNF236|p.M461Nfs*104|1|0.37|ENSG00000130856|chr18:76881473-76881474|-/A|frameshift_variant'] 72751 8474 NADETWWIFHL True PC9_epitope_Rep3 1430.6619001151798 1430.66080993586 37.557 2 -1.1903852457484503 0.35972737295780294 1.0 ['nc|ENSG00000158488|P15812-10|CD1E', 'nc|ENSG00000158488|P15812-3|CD1E'] 70420 12965 LYQVLYFPLFW True H1975_Epitope_Rep1 1487.78530972315 1487.7842099358602 54.945 2 -1.1904627758426622 0.35976045203402784 1.0 ['ENST00000377258.5_1_1:9937984-9953219:-|nuORF'] 105134 16216 STLQTKEKAK True NCI_RA007_Epitope_Rep4 1132.6451874218799 1132.6440899358602 70.321 2 -1.190535007697348 0.35978352104030165 1.0 ['SYNE1|p.L3135Q|1|0.22|ENSG00000131018|chr6:152373140-152373140|A/T|missense_variant'] 3368 20392 AGIKEEIRR True PC9_epitope_Rep6 1070.6196413803798 1070.61854993586 91.136 2 -1.1905459797464584 0.35978352104030165 1.0 ['ENSG00000017797|ENST00000383432|RALBP1'] 57227 9722 LEFDIGWLA True H1975_Epitope_Rep1 1062.53859709502 1062.53750993586 42.323 2 -1.1905939464430098 0.35978352104030165 1.0 ['ENSG00000133116|ENST00000380099|KL'] 104703 5765 STCNSTVETR True NCI_RA007_Epitope_Rep1 1096.48188714788 1096.48078993586 26.479 2 -1.1906194377007462 0.35978352104030165 1.0 ['nc|ENSG00000135899|Q9HB58-5|SP110', 'nc|ENSG00000135899|Q9HB58-3|SP110', 'nc|ENSG00000135899|Q9HB58-7|SP110', 'nc|ENSG00000135899|Q9HB58|SP110', 'ENSG00000135899|ENST00000258381|SP110', 'ENST00000490880.5_1_2:231065532-231076254:-|nuORF', 'nc|ENSG00000135899|Q9HB58-2|SP110'] 109300 12345 TGETSMLKRPV True H1975_Epitope_Rep3 1217.64380752289 1217.64270993586 52.671 2 -1.190649263247793 0.35978352104030165 1.0 ['ENSG00000105889|ENST00000678116|STEAP1B', 'ENST00000483679.1_1_7:22532171-22534501:-|nuORF', 'ENST00000475789.1_1_7:89789075-89791404:+|nuORF', 'ENSG00000164647|ENST00000297205|STEAP1', 'nc|ENSG00000105889|Q6NZ63-2|STEAP1B'] 36017 16093 GVDFEGTF True PC9_epitope_Rep5 870.37594844402 870.3753949679301 66.889 1 -1.1906708799255437 0.35978352104030165 1.0 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 35209 6099 GSGGSAHCT True NCI_RA007_Epitope_Rep5 775.2919015502301 775.29135496793 30.141 1 -1.1906936920459668 0.35979154139106034 1.0 ['ENST00000584377.5_1_17:80211530-80212190:-|nuORF'] 65698 11047 LSHLEEEQP True PC9_epitope_Rep2 1080.50875351872 1080.5076499358602 47.812 2 -1.190772668426233 0.35979956154087067 1.0 ['ENSG00000099308|ENST00000687212|MAST3', 'ENST00000608648.1_1_19:18220994-18239762:+|nuORF', 'MAST3|p.A548Pfs*4|1|0.2|ENSG00000099308|chr19:18134841-18134841|G/-|frameshift_variant', 'nc|ENSG00000099308|O60307|MAST3'] 123569 12727 VIIQQAVPSP True PC9_epitope_Rep1 1050.6073453611798 1050.6062499358602 53.828 2 -1.1908585851462161 0.3598146060378304 1.0 ['nc|ENSG00000115966|P15336-3|ATF2', 'nc|ENSG00000115966|P15336-7|ATF2', 'nc|ENSG00000115966|P15336-4|ATF2', 'nc|ENSG00000115966|P15336-5|ATF2', 'ENSG00000115966|ENST00000264110|ATF2'] 127155 8417 VQEILRDLAHV True H1975_Epitope_Rep1 1291.7248347249101 1291.72372993586 37.303 2 -1.1908618880837014 0.3598146060378304 1.0 ['nc|ENSG00000108852|Q14168-6|MPP2', 'nc|ENSG00000108852|Q14168-2|MPP2', 'nc|ENSG00000108852|Q14168-3|MPP2', 'nc|ENSG00000108852|Q14168|MPP2', 'nc|ENSG00000108852|Q14168-4|MPP2', 'ENST00000520319.1_1_17:41960558-41984643:-|nuORF'] 1664 6146 AEGGANKGYVQ True PC9_epitope_Rep2 1092.5199869087598 1092.5188899358602 29.033 2 -1.1908796002234627 0.3598146060378304 1.0 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2'] 129691 13401 VTIRFENV True PC9_epitope_Rep5 976.5341804209199 976.53308993586 56.564 2 -1.1908841470302947 0.3598146060378304 1.0 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3', 'FAT3|p.S3657Y|1|0.3|ENSG00000165323|chr11:92844337-92844337|C/A|missense_variant'] 129496 5057 VTEWLQRDIM True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 24.539 3 -1.1908901436663422 0.3598146060378304 1.0 ['ENSG00000183090|ENST00000329798|FREM3'] 111822 16800 TLRHEILELII True PC9_epitope_Rep1 1348.8078360728798 1348.8067299358602 69.445 2 -1.1909794270486098 0.35983515175808894 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000103472|A6NIE6|RRN3P2', 'ENST00000564580.5_1_16:29086353-29108616:+|nuORF', 'ENST00000561685.1_1_16:15168568-15177423:-|nuORF', 'nc|ENSG00000085721|Q9NYV6-2|RRN3'] 112342 23316 TMRPYIQEQ True NCI_RA007_Epitope_Rep4 1164.5597435457598 1164.55810490379 101.25 3 -1.1910745278233048 0.3598431706583826 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 133872 10270 WM[Oxidation]MARHWASV True H1975_Epitope_Rep3 1289.57976817813 1289.57866993586 44.554 2 -1.191155256832309 0.3598592078563018 1.0 ['ENST00000494946.6_1_16:2822040-2825556:-|nuORF'] 58963 16712 LFYKYMHKKYR True NCI_RA007_Epitope_Rep2 1575.83842500851 1575.83732993586 69.739 2 -1.19116332435057 0.3598592078563018 1.0 ['nc|ENSG00000100678|P57103-3|SLC8A3', 'SLC8A3|p.E535Nfs*35|2|0.17|ENSG00000100678|chr14:70166820-70166820|C/-|frameshift_variant'] 122997 10629 VGWSDSYTCEY True PC9_epitope_Rep5 1308.49686850568 1308.4957699358602 45.873 2 -1.1911684082129974 0.3598627185730748 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 36497 6604 GVKGAKIK True NCI_RA007_Epitope_Rep4 799.5279728416699 799.52686993586 32.029 2 -1.1911753616596885 0.3598627185730748 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 8530 7000 ATWKRLET True PC9_epitope_Rep1 1003.5450794577898 1003.5439899358599 31.73 2 -1.1912360673171563 0.35986622911395577 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|47|2|sense'] 30051 7295 FYKQFYIVKDW True NCI_RA007_Epitope_Rep2 1535.7812869718696 1535.7796349037899 32.996 3 -1.191244755414685 0.35986622911395577 1.0 ['ENST00000406462.6_1_1:109428057-109428105:+|nuORF'] 98778 7557 SISPGSPPY True NCI_RA007_Epitope_Rep2 903.43379767331 903.43270993586 34.02 2 -1.1912574694919904 0.3598742469219304 1.0 ['nc|ENSG00000111077|Q63HR2-5|TNS2', 'ENST00000549311.7_1_12:53443879-53456445:+|nuORF', 'nc|ENSG00000111077|Q63HR2-6|TNS2', 'ENSG00000111077|ENST00000314250|TNS2', 'nc|ENSG00000111077|Q63HR2-4|TNS2'] 59439 20198 LGLVPREKSVT True PC9_epitope_Rep5 1197.70812203161 1197.7070299358602 82.737 2 -1.191357720117796 0.3599028068285718 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98'] 18805 13698 ELDYEESPVYQ True H1975_Epitope_Rep2 1370.58779168506 1370.58668993586 57.833 2 -1.191359523189668 0.3599028068285718 1.0 ['ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10'] 92938 1712 RRPMLWPLW True PC9_epitope_Rep5 1253.6855531955698 1253.68390490379 9.4887 3 -1.191421831786955 0.35992334861351166 1.0 ['ENST00000532433.5_1_1:212965321-212969949:+|nuORF', 'ENST00000366974.8_1_1:212965321-212970536:+|nuORF'] 84451 17477 QGKRKTSI True PC9_epitope_Rep3 916.54541381096 916.54430993586 72.404 2 -1.1915452419247992 0.35997144574691914 1.0 ['ENSG00000102362|ENST00000372989|SYTL4', 'ENST00000372981.1_1_X:99941666-99941798:-|nuORF'] 120070 7804 VFGAGFQEK True NCI_RA007_Epitope_Rep4 981.4919812557698 981.49088993586 36.703 2 -1.1915483311404724 0.35997144574691914 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 79368 24629 PGKVLVPLA True H1975_Epitope_Rep1 892.5745886809199 892.57348993586 102.05 2 -1.1915614371783592 0.35997144574691914 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 100237 15393 SLLPDKKTV True PC9_epitope_Rep4 999.59644632431 999.59534993586 67.142 2 -1.1915987634619634 0.35997144574691914 1.0 ['ENSG00000145632|ENST00000274289|PLK2'] 115793 22189 TVLWCLPGTTE True NCI_RA007_Epitope_Rep5 1218.5954603481398 1218.59380490379 92.493 3 -1.1916216733507077 0.35997144574691914 1.0 ['ENST00000519132.5_1_5:178032263-178039506:-|nuORF'] 32233 12988 GFGGGGYGGF True NCI_RA007_Epitope_Rep4 874.3609670862198 874.3604149679301 57.059 1 -1.191669005870459 0.35997144574691914 1.0 ['nc|ENSG00000215301|O00571-2|DDX3X', 'nc|ENSG00000067048|O15523-2|DDX3Y', 'DDX3X|p.V656Gfs*2|1|0.55|ENSG00000215301|chrX:41347694-41347695|-/G|frameshift_variant', 'ENSG00000067048|ENST00000336079|DDX3Y', 'ENSG00000215301|ENST00000644876|DDX3X'] 40286 23711 HRPSRVQLVL True H1975_Epitope_Rep2 1203.72002412799 1203.71836490379 97.704 3 -1.1916736160540164 0.36000350648700097 1.0 ['ENSG00000135898|ENST00000650999|GPR55'] 4731 14192 ALDVANKSI True PC9_epitope_Rep1 929.51819600361 929.51708993586 59.412 2 -1.1917401467980204 0.36000350648700097 1.0 ['LRRK2|p.N801K|1|0.34|ENSG00000188906|chr12:40284036-40284036|T/A|missense_variant'] 82523 21376 PVFFSHRF True H1975_Epitope_Rep3 1035.5290354708297 1035.5279299358601 89.32 2 -1.1917631806601703 0.36000350648700097 1.0 ['ENST00000466482.5_1_3:98489996-98501720:+|nuORF', 'ENST00000495376.5_1_3:98489996-98502446:+|nuORF', 'ENST00000476833.5_1_3:98489996-98501153:+|nuORF'] 32335 16395 GGASKWPV True NCI_RA007_Epitope_Rep4 800.4180880395198 800.41698993586 71.065 2 -1.1917914188583272 0.36000350648700097 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 99217 4905 SLAWSVGGHL True NCI_RA007_Epitope_Rep1 1025.52942939365 1025.52832993586 23.159 2 -1.1918874990400732 0.3600115211701502 1.0 ['ENST00000506742.2_1_5:108120754-108121222:+|nuORF'] 3301 4333 AGGKHPGF True NCI_RA007_Epitope_Rep3 769.3871222644099 769.38602993586 23.793 2 -1.1920629261653177 0.3600515915750457 1.0 ['ENST00000242057.8_1_7:17338276-17338534:+|nuORF'] 55588 18908 LCLLNPSG True H1975_Epitope_Rep2 815.42112481463 815.4205749679301 78.494 1 -1.1920744928700677 0.3600515915750457 1.0 ['ENSG00000168702|ENST00000389484|LRP1B'] 67980 10683 LTLREHLEVY True NCI_RA007_Epitope_Rep1 1271.68738658703 1271.68628993586 45.545 2 -1.1921032317972982 0.3600515915750457 1.0 ['ENSG00000154262|ENST00000284425|ABCA6'] 28634 5881 FSRSGGGK True NCI_RA007_Epitope_Rep4 794.4035006045399 794.40240993586 29.245 2 -1.1921128278996116 0.3600515915750457 1.0 ['ENST00000461845.1_1_2:85822886-85823939:+|nuORF', 'ENST00000414390.5_1_2:85823769-85823939:+|nuORF'] 63352 21323 LPEPLPPPPRP True PC9_epitope_Rep2 1208.6917436914798 1208.6906499358602 87.483 2 -1.1921130932077484 0.3600515915750457 1.0 ['ENST00000334062.7_1_13:114748460-114748754:-|nuORF'] 62624 23287 LLVPAPQHL True PC9_epitope_Rep2 986.5913013742202 986.59020993586 95.058 2 -1.192133506352739 0.3600550964187328 1.0 ['nc|ENSG00000182149|P53990-3|IST1'] 42884 7544 IFSSSLKR True NCI_RA007_Epitope_Rep2 936.53926580136 936.53816993586 33.97 2 -1.192213756720608 0.3600550964187328 1.0 ['ENST00000367161.7_1_1:205116358-205116508:-|nuORF'] 108922 23251 TESVNSIRRLE True NCI_RA007_Epitope_Rep5 1302.6891774921799 1302.68752490379 96.707 3 -1.192324011549495 0.36007563140957416 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 79876 20496 PIKTRLAI True PC9_epitope_Rep3 910.5963867546599 910.59528993586 84.097 2 -1.192365806022709 0.3600861432130918 1.0 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1', 'nc|ENSG00000127980|O43933-2|PEX1', 'ENST00000477342.1_1_7:92116773-92118803:-|nuORF'] 67964 14334 LTLNLNLSL True PC9_epitope_Rep6 999.59644632431 999.59534993586 67.034 2 -1.1923673817546732 0.3600861432130918 1.0 ['ENST00000581549.1_1_17:70599690-70599849:-|nuORF'] 65509 19703 LSFSWLEEV True PC9_epitope_Rep3 1108.54407639828 1108.5429699358601 81.016 2 -1.192385849234302 0.3600861432130918 1.0 ['ENST00000307641.9_1_17:40176368-40176479:+|nuORF'] 39130 18092 HLDLWFYFTL True PC9_epitope_Rep1 1353.6757592741696 1353.67411490379 74.385 3 -1.1923875781113702 0.3600861432130918 1.0 ['CLN6|p.H144Tfs*19|1|0.19|ENSG00000128973|chr15:68211731-68211731|G/-|frameshift_variant', 'ENSG00000128973|ENST00000249806|CLN6', 'nc|ENSG00000128973|Q9NWW5-2|CLN6'] 29364 14186 FVEKSGYRF True PC9_epitope_Rep3 1131.57129420563 1131.56965490379 59.652 3 -1.1923955584154273 0.3600861432130918 1.0 ['ENSG00000154007|ENST00000284142|ASB17', 'ASB17|p.N177Tfs*7|1|0.1|ENSG00000154007|chr1:75922231-75922231|T/-|frameshift_variant'] 83265 12398 QAEIPLMRDRA True H1975_Epitope_Rep3 1298.6765046335 1298.6754099358602 52.878 2 -1.192457272123816 0.3600861432130918 1.0 ['nc|ENSG00000156030|Q6PJG2|MIDEAS', 'ENSG00000156030|ENST00000423556|MIDEAS'] 12295 7886 DISSMKLKRSS True NCI_RA007_Epitope_Rep1 1250.66527124346 1250.66362490379 34.669 3 -1.1924901549266291 0.36009415535633793 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'MYO7B|p.S1119*|1|0.51|ENSG00000169994|chr2:127620375-127620376|CG/-|frameshift_variant'] 129715 17837 VTKARLTDK True NCI_RA007_Epitope_Rep5 1030.61349337078 1030.6123899358602 75.408 2 -1.1925151424654787 0.36009765869538 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 124505 19484 VLFLVVWLG True PC9_epitope_Rep6 1044.63718893748 1044.6360899358601 87.608 2 -1.1925718793965314 0.36009765869538 1.0 ['nc|ENSG00000007952|Q9Y5S8-3|NOX1', 'ENSG00000007952|ENST00000372966|NOX1'] 123430 6211 VIEDDVRFEH True NCI_RA007_Epitope_Rep2 1257.59896550545 1257.5978699358602 28.767 2 -1.1926522746605137 0.360118190582314 1.0 ['ENSG00000198756|ENST00000361927|COLGALT2'] 11069 24536 DDSTPCIS True H1975_Epitope_Rep1 836.322198619 836.32110993586 101.68 2 -1.1927291590846723 0.36015124198717946 1.0 ['ENSG00000135164|ENST00000331242|DMTF1', 'nc|ENSG00000135164|Q9Y222-2|DMTF1', 'nc|ENSG00000135164|Q9Y222-3|DMTF1'] 23441 20840 EVWFKNRRAKW True PC9_epitope_Rep3 1518.82080079842 1518.8197099358601 85.433 2 -1.1927782084703098 0.36015474372136114 1.0 ['ENSG00000063515|ENST00000086933|GSC2', 'ENSG00000133937|ENST00000238558|GSC'] 33581 10953 GLKVVGGK True PC9_epitope_Rep1 756.4857736765198 756.48466993586 47.018 2 -1.1927825993798322 0.36015474372136114 1.0 ['nc|ENSG00000176406|Q9UQ26-4|RIMS2', 'nc|ENSG00000176406|Q9UQ26-5|RIMS2', 'nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2', 'nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1', 'nc|ENSG00000079841|Q86UR5-10|RIMS1', 'RIMS1|p.P777Lfs*6|1|0.46|ENSG00000079841|chr6:72250417-72250417|C/-|frameshift_variant', 'nc|ENSG00000079841|Q86UR5-13|RIMS1', 'nc|ENSG00000079841|Q86UR5-9|RIMS1', 'nc|ENSG00000079841|Q86UR5-12|RIMS1', 'nc|ENSG00000079841|Q86UR5-2|RIMS1', 'ENST00000524197.1_1_6:72926891-72975792:+|nuORF'] 18084 17198 EIKKSRRHP True H1975_Epitope_Rep2 1149.6730739355698 1149.67196993586 71.441 2 -1.1927929526980607 0.3601582452801843 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 122186 22509 VGRLGGLG True NCI_RA007_Epitope_Rep3 727.4340724568299 727.4335249679301 97.844 1 -1.1927981958986418 0.3601582452801843 1.0 ['ENSG00000027001|ENST00000382172|MIPEP', 'ENST00000469167.1_1_13:24463081-24463459:-|nuORF'] 133202 4968 WEALGNTL True PC9_epitope_Rep1 902.44978209062 902.44868993586 23.969 2 -1.1928179749063597 0.360178774866357 1.0 ['nc|ENSG00000162739|Q96DU3-3|SLAMF6', 'nc|ENSG00000162739|Q96DU3-2|SLAMF6', 'ENSG00000162739|ENST00000368057|SLAMF6'] 36718 16287 GVNFRWMRR True NCI_RA007_Epitope_Rep3 1220.63491460504 1220.6338099358602 71.765 2 -1.1928753921396502 0.36018227569198413 1.0 ['ENST00000301633.8_1_17:76220242-76220407:+|nuORF'] 81040 10227 PPADGALK True PC9_epitope_Rep5 767.41775368635 767.41664993586 44.327 2 -1.192884032242699 0.36018227569198413 1.0 ['ENSG00000011485|ENST00000012443|PPP5C'] 136969 25006 YKKKINPIK True NCI_RA007_Epitope_Rep5 1130.7175645164998 1130.71646993586 103.69 2 -1.1929250318830542 0.36020179512537087 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense'] 30489 16030 GAGQNWAP True H1975_Epitope_Rep1 799.3613014393899 799.36075496793 66.995 1 -1.1929922477074688 0.36020179512537087 1.0 ['ENST00000374005.7_1_1:27951657-27961627:-|nuORF'] 105488 11000 SVCLSIISML True PC9_epitope_Rep5 1064.56098941572 1064.5598899358602 47.299 2 -1.1930471872298698 0.36020179512537087 1.0 ['ENST00000362030.3_1_1:96884238-96884478:+|nuORF', 'ENST00000519277.5_1_8:74708911-74722861:-|nuORF', 'ENST00000519255.2_1_8:74708126-74722861:-|nuORF', 'ENSG00000104343|ENST00000602593|UBE2W', 'nc|ENSG00000104343|Q96B02-2|UBE2W', 'nc|ENSG00000104343|Q96B02-3|UBE2W'] 93960 24308 RVLRRYRLQRR True PC9_epitope_Rep4 1570.97567873038 1570.9745899358602 101.98 2 -1.193054045782682 0.36020179512537087 1.0 ['ENSG00000177971|ENST00000403490|IMP3'] 63405 10289 LPGIHVSA True PC9_epitope_Rep2 792.4493881678 792.44828993586 44.907 2 -1.1930785865148676 0.3602168035249349 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 98293 7052 SIFNSTSVL True PC9_epitope_Rep6 966.5022115863001 966.50110993586 36.139 2 -1.1930947198115858 0.3602168035249349 1.0 ['ENST00000274242.9_2_5:40830383-40830557:-|nuORF'] 98652 10271 SIPPTNHEI True PC9_epitope_Rep2 1006.5083595959001 1006.50726993586 44.84 2 -1.1931275730371578 0.3602168035249349 1.0 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-2|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD', 'nc|ENSG00000153707|P23468-4|PTPRD'] 15861 7498 EDLSVIWR True NCI_RA007_Epitope_Rep5 1016.52909504048 1016.52798993586 35.523 2 -1.193155607087847 0.3602168035249349 1.0 ['ENSG00000104133|ENST00000261866|SPG11', 'nc|ENSG00000104133|Q96JI7-2|SPG11', 'nc|ENSG00000104133|Q96JI7-3|SPG11'] 114616 10694 TSMVTEFLL True PC9_epitope_Rep2 1039.5259838059899 1039.52488993586 46.446 2 -1.1931599642632564 0.3602168035249349 1.0 ['OR10C1|p.F62Sfs*76|1|0.4|ENSG00000206474|chr6:29440193-29440193|T/-|frameshift_variant', 'ENSG00000206474|ENST00000444197|OR10C1'] 11574 15652 DGTGRWRAGL True PC9_epitope_Rep5 1087.55229009655 1087.55118993586 65.217 2 -1.193183156718284 0.3602248119265481 1.0 ['ENSG00000146950|ENST00000380913|SHROOM2'] 131494 23928 VVVCGCCL True H1975_Epitope_Rep3 794.3488884745 794.3483349679301 99.752 1 -1.1932149019421705 0.3602283110738381 1.0 ['ENST00000564284.1_1_16:28841101-28842119:+|nuORF'] 121130 14510 VGGGCGSG True NCI_RA007_Epitope_Rep5 592.2275103885199 592.22696496793 62.489 1 -1.1932466501939496 0.3602283110738381 1.0 ['ENST00000474219.1_1_3:80265926-80266142:+|nuORF'] 4906 8578 ALGLGNGR True NCI_RA007_Epitope_Rep1 756.4242360491199 756.42312993586 37.37 2 -1.193370433620802 0.36026135282631555 1.0 ['nc|ENSG00000162066|Q9Y303-3|AMDHD2', 'ENST00000561487.1_1_16:2577913-2578724:+|nuORF', 'ENSG00000162066|ENST00000293971|AMDHD2', 'nc|ENSG00000162066|Q9Y303-2|AMDHD2'] 78553 17223 PDNKLHQQVL True PC9_epitope_Rep4 1190.6407707477802 1190.6396699358602 74.257 2 -1.1933989667968332 0.36028187701050157 1.0 ['ENSG00000171864|ENST00000305817|PRND'] 118007 12877 VASLTYKDKV True PC9_epitope_Rep6 1122.62847472858 1122.62683490379 61.052 3 -1.1934806031700047 0.3602978909819138 1.0 ['nc|ENSG00000117586|P23510-2|TNFSF4', 'ENSG00000117586|ENST00000281834|TNFSF4'] 120666 16331 VGAPARRG True H1975_Epitope_Rep1 782.4511195032999 782.45057496793 68.174 1 -1.193503509781851 0.3602978909819138 1.0 ['ENST00000578528.1_1_18:47018505-47018613:-|nuORF'] 40415 5406 HRWVSLWPWSQ True H1975_Epitope_Rep1 1480.7364024681199 1480.73476490379 25.851 3 -1.1935557776517038 0.36030838162225753 1.0 ['CON__O76014'] 69544 15156 LVTEDVLK True H1975_Epitope_Rep1 915.5276980581499 915.5271449679301 63.557 1 -1.1935629283806715 0.36030838162225753 1.0 ['nc|ENSG00000203995|Q6WRX3-2|ZYG11A', 'ENSG00000203995|ENST00000371528|ZYG11A'] 60796 19940 LKHCLLKEVF True NCI_RA007_Epitope_Rep2 1228.7002002001998 1228.6991099358602 82.562 2 -1.1936004265611442 0.36030838162225753 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 111191 7021 TLFLMWIYH True PC9_epitope_Rep4 1222.62088725034 1222.6192349037901 34.256 3 -1.1936499624166348 0.36030838162225753 1.0 ['ENST00000239893.9_1_13:37578680-37580262:+|nuORF'] 12775 16661 DLHQDLVL True PC9_epitope_Rep3 951.50254593947 951.50144993586 69.223 2 -1.1936559445192474 0.36030838162225753 1.0 ['ENST00000469141.6_1_1:36748189-36748300:+|nuORF'] 85875 14350 QNIEYEYQNPR True H1975_Epitope_Rep1 1452.6633566671599 1452.66224993586 60.39 2 -1.1936649694386392 0.36030838162225753 1.0 ['ENSG00000196757|ENST00000254321|ZNF700', 'nc|ENSG00000198429|Q9UC07-2|ZNF69', 'ENSG00000197054|ENST00000358987|ZNF763', 'nc|ENSG00000197054|Q0D2J5-2|ZNF763', 'ENSG00000198429|ENST00000429654|ZNF69', 'nc|ENSG00000171291|Q8NDP4|ZNF439', 'ENSG00000171291|ENST00000682736|ZNF439'] 129883 7512 VTLSGIPR True NCI_RA007_Epitope_Rep2 841.50215201665 841.50104993586 33.844 2 -1.1936968984161849 0.3603118781522596 1.0 ['ENST00000281405.8_1_2:20189760-20189823:-|nuORF'] 46360 14850 ITHDTFQKELM True PC9_epitope_Rep1 1361.66493689029 1361.66329490379 61.94 3 -1.1937293024649822 0.3603118781522596 1.0 ['nc|ENSG00000003096|Q9P2N7-2|KLHL13', 'ENSG00000003096|ENST00000540167|KLHL13', 'nc|ENSG00000003096|Q9P2N7-4|KLHL13', 'nc|ENSG00000003096|Q9P2N7|KLHL13', 'nc|ENSG00000003096|Q9P2N7-5|KLHL13'] 61708 6515 LLIFFSPFPP True H1975_Epitope_Rep1 1176.65831830488 1176.6572299358602 30.12 2 -1.1939564061545525 0.36036092408580084 1.0 ['ENST00000326764.9_2_19:54972239-54972944:+|nuORF', 'nc|ENSG00000167615|Q96PV6-1|LENG8'] 85910 13611 QNRQFSDFR True PC9_epitope_Rep5 1196.56866843668 1196.56702490379 57.377 3 -1.1939912983096255 0.36036092408580084 1.0 ['ENST00000328345.7_2_6:99284709-99285063:+|nuORF'] 80396 17940 PLHWVCKKVR True NCI_RA007_Epitope_Rep1 1264.7226669802799 1264.72156993586 73.919 2 -1.194045277483388 0.36036092408580084 1.0 ['ENST00000538029.1_1_12:9102760-9162130:+|nuORF', 'ENSG00000139187|ENST00000356986|KLRG1'] 76735 12092 NTQYFNFVELP True NCI_RA007_Epitope_Rep4 1370.6506667251397 1370.6495699358602 53.511 2 -1.194093152263324 0.36039395797614726 1.0 ['ENSG00000144647|ENST00000344697|POMGNT2'] 31328 5929 GEAHQEVL True PC9_epitope_Rep1 881.42429561877 881.42318993586 27.619 2 -1.1941532167207787 0.36039745210176577 1.0 ['ENSG00000104219|ENST00000262096|ZDHHC2'] 10331 15866 CIDRCVNMDGW True PC9_epitope_Rep4 1310.52059823906 1310.51950993586 68.959 2 -1.1941572662472622 0.36039745210176577 1.0 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant', 'nc|ENSG00000168710|O43865-2|AHCYL1', 'ENSG00000168710|ENST00000369799|AHCYL1'] 115348 12176 TVEETPRVQGE True H1975_Epitope_Rep1 1243.6044448087098 1243.60334993586 51.853 2 -1.1942597462462168 0.36044096301116174 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1', 'nc|ENSG00000137337|Q14676-4|MDC1', 'MDC1|p.V565Yfs*3|1|0.1|ENSG00000137337|chr6:30712249-30712249|C/-|frameshift_variant'] 72509 10061 MVDARSIP True PC9_epitope_Rep1 887.4534875720699 887.45238993586 43.57 2 -1.1943724393398811 0.36044096301116174 1.0 ['ENSG00000169139|ENST00000523111|UBE2V2', 'ENST00000521628.1_1_8:48962382-48973385:+|nuORF'] 58421 8550 LEVTRTDHQR True NCI_RA007_Epitope_Rep2 1253.64764703337 1253.64654993586 37.9 2 -1.1943791125175878 0.36044096301116174 1.0 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'CLIP1|p.E1185Gfs*24|1|0.23|ENSG00000130779|chr12:122309804-122309805|-/T|frameshift_variant'] 17962 7501 EIFFFKDRFIW True NCI_RA007_Epitope_Rep1 1546.7972713891795 1546.79563490379 33.169 3 -1.194403878249223 0.36044096301116174 1.0 ['nc|ENSG00000087245|P08253-2|MMP2', 'nc|ENSG00000087245|P08253-3|MMP2', 'ENSG00000087245|ENST00000219070|MMP2'] 59843 21983 LHENHAYPV True PC9_epitope_Rep1 1078.51959298594 1078.51848993586 89.379 2 -1.1944573296518795 0.36044096301116174 1.0 ['ZNF423|p.K473E|1|0.35|ENSG00000102935|chr16:49637759-49637759|T/C|missense_variant'] 68286 8162 LTRLQHLAE True H1975_Epitope_Rep3 1079.60874234351 1079.60764993586 36.374 2 -1.1944821657910323 0.36044096301116174 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1', 'HUWE1|p.N2399Tfs*6|1|0.21|ENSG00000086758|chrX:53562839-53562839|T/-|frameshift_variant', 'ENST00000218328.12_1_X:53611240-53681066:-|nuORF'] 129744 8840 VTKKLQES True NCI_RA007_Epitope_Rep5 931.53384606775 931.53274993586 40.667 2 -1.1944969835698422 0.36044096301116174 1.0 ['UGT2B11|p.M137T|1|0.14|ENSG00000213759|chr4:69214313-69214313|A/G|missense_variant'] 13131 9197 DLSLVVSDP True H1975_Epitope_Rep2 943.48622716899 943.4856749679301 40.33 1 -1.1945200508033036 0.36044896580201957 1.0 ['ENST00000419746.5_1_2:179403628-179404009:+|nuORF'] 139497 6987 YTHVNEVWP True NCI_RA007_Epitope_Rep5 1143.53490869691 1143.53326490379 33.556 3 -1.1945858723297655 0.3604694812182487 1.0 ['ENSG00000188716|ENST00000338487|DUSP29'] 89946 10812 RFWYIEGIMYK True H1975_Epitope_Rep3 1504.7536923250398 1504.7525899358602 46.667 2 -1.1948417830784186 0.36054353674253325 1.0 ['ENSG00000123684|ENST00000366997|LPGAT1'] 79485 6311 PGPSLAGK True NCI_RA007_Epitope_Rep3 725.40718900265 725.4066449679301 31.827 1 -1.194857775996159 0.36054353674253325 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 100628 8619 SLQPSQWG True PC9_epitope_Rep3 901.4293809992098 901.42828993586 38.102 2 -1.1948694058492495 0.36054353674253325 1.0 ['ENSG00000013503|ENST00000228347|POLR3B', 'nc|ENSG00000013503|Q9NW08-2|POLR3B'] 136191 21651 YGKWELYIPP True PC9_epitope_Rep2 1264.6492101731596 1264.64810993586 88.756 2 -1.194918747940386 0.3605640499487 1.0 ['ENSG00000114480|ENST00000429644|GBE1', 'GBE1-ZNF385D|1|fusion', 'ENST00000477426.1_1_3:81704122-81720126:-|nuORF'] 35080 24823 GRKAGPPP True PC9_epitope_Rep4 778.4449714936999 778.44386993586 103.99 2 -1.1949652576574368 0.36057205059870123 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 86543 26158 QRAPKPLPRV True PC9_epitope_Rep3 1160.71421047156 1160.71310993586 106.63 2 -1.1950126905482852 0.36059256293478803 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 145 7501 AADIAVGVLAI True NCI_RA007_Epitope_Rep3 1011.5964463243099 1011.59534993586 36.627 2 -1.1950302025026536 0.36061307475758525 1.0 ['ENSG00000128271|ENST00000337539|ADORA2A'] 69253 11668 LVNVLQVP True PC9_epitope_Rep1 880.5382031721998 880.53710993586 49.758 2 -1.1950917551494367 0.360647534215728 1.0 ['ENST00000534701.1_1_11:71149825-71152361:-|nuORF'] 58020 16364 LERERRRTQRY True H1975_Epitope_Rep3 1561.8549544610098 1561.8538499358601 68.418 2 -1.1951346477309752 0.360647534215728 1.0 ['ENSG00000163491|ENST00000691995|NEK10', 'nc|ENSG00000163491|Q6ZWH5|NEK10', 'nc|ENSG00000163491|Q6ZWH5-7|NEK10', 'ENST00000574215.5_1_3:27203940-27332977:-|nuORF', 'nc|ENSG00000163491|Q6ZWH5-6|NEK10', 'nc|ENSG00000163491|Q6ZWH5-5|NEK10'] 41896 6149 IDYDRDRFDRE True PC9_epitope_Rep5 1498.6800693604598 1498.67896993586 28.637 2 -1.1951763313172477 0.360647534215728 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 81826 20622 PSGKRQCKT True PC9_epitope_Rep4 1003.5232984673898 1003.52220993586 87.478 2 -1.1952072932320976 0.360647534215728 1.0 ['nc|ENSG00000291031|Q8N888|BCORP1', 'ENST00000441139.5_1_Y:21628916-21635881:-|nuORF'] 112331 23559 TMLLMNLAA True PC9_epitope_Rep4 976.5085599200399 976.50746993586 98.926 2 -1.1952109797619754 0.360647534215728 1.0 ['ENSG00000127533|ENST00000248076|F2RL3'] 8952 8245 AVGSCRLPV True PC9_epitope_Rep5 900.4851220535198 900.48402993586 36.656 2 -1.1952115067158438 0.360647534215728 1.0 ['ENSG00000158006|ENST00000374282|PAFAH2'] 79513 4423 PGQPALTRVPP True H1975_Epitope_Rep3 1131.64004247179 1131.6389499358602 22.136 2 -1.1953455449903134 0.360647534215728 1.0 ['ENSG00000162928|ENST00000295030|PEX13'] 46951 18388 IVLSSEHGFL True H1975_Epitope_Rep3 1100.5866099166 1100.58550993586 77.084 2 -1.1953955668289196 0.360647534215728 1.0 ['ENSG00000223638|ENST00000434937|RFPL4A'] 33750 13207 GLSGLSSKDA True H1975_Epitope_Rep1 933.47672511445 933.4761749679301 55.898 1 -1.1954626520791503 0.360647534215728 1.0 ['KCNC2|p.A339D|1|0.35|ENSG00000166006|chr12:75050989-75050989|G/T|missense_variant'] 111577 9392 TLNEKLTA True NCI_RA007_Epitope_Rep4 888.4916469026 888.49054993586 42.98 2 -1.1956213820937327 0.36071808344279727 1.0 ['ENSG00000254999|ENST00000530758|BRK1', 'nc|ENSG00000254999|Q8WUW1-2|BRK1'] 103998 22798 SRRRRRRQQRR True NCI_RA007_Epitope_Rep4 1609.96863628733 1609.96752993586 98.977 2 -1.1957826361135115 0.36078411749252537 1.0 ['ENST00000397992.5_1_16:72984846-73092758:-|nuORF'] 58058 4960 LERLYLQMWEH True NCI_RA007_Epitope_Rep1 1516.74966957376 1516.74802490379 23.377 3 -1.1957908473044978 0.36078411749252537 1.0 ['nc|ENSG00000147162|O15294-3|OGT', 'ENSG00000147162|ENST00000373719|OGT', 'nc|ENSG00000147162|O15294-2|OGT', 'nc|ENSG00000147162|O15294-4|OGT'] 12455 20475 DKNVRRRFRA True NCI_RA007_Epitope_Rep2 1316.75378386776 1316.75212490379 84.715 3 -1.1958550353343134 0.36078760054541587 1.0 ['ENST00000562622.5_1_16:58149118-58163019:-|nuORF', 'ENSG00000070761|ENST00000262498|CFAP20', 'ENST00000564150.1_1_16:58147931-58149427:-|nuORF'] 55489 13048 LAVKSYTG True PC9_epitope_Rep3 837.45961849833 837.45852993586 55.217 2 -1.1958683427152126 0.36078760054541587 1.0 ['ENST00000390340.2_1_7:38331389-38331587:-|nuORF'] 63592 22307 LPLLRVPLL True PC9_epitope_Rep2 1032.70593720364 1032.70484993586 91.282 2 -1.1959805487777968 0.3607990793325161 1.0 ['ENST00000296597.9_1_5:60240975-60241137:+|nuORF'] 131473 24745 VVTVIIII True NCI_RA007_Epitope_Rep1 868.5997407995999 868.59864993586 102.45 2 -1.195992309515769 0.3607990793325161 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6-2|KIAA1549L'] 115265 9555 TVDKHYRDF True NCI_RA007_Epitope_Rep4 1179.56727145435 1179.56563490379 43.601 3 -1.1960216968414161 0.3607990793325161 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'ENST00000494648.1_1_3:124174014-124181481:+|nuORF', 'nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN'] 111913 14391 TLRSNPLQL True PC9_epitope_Rep1 1040.5978433066398 1040.59674993586 60.18 2 -1.1960614973643537 0.36080256179325526 1.0 ['nc|ENSG00000185621|Q96KR4-2|LMLN', 'nc|ENSG00000185621|Q96KR4|LMLN', 'ENSG00000185621|ENST00000420910|LMLN'] 123179 22247 VHGVTFVF True PC9_epitope_Rep6 904.48068829608 904.47958993586 98.53 2 -1.1960862590332093 0.36080256179325526 1.0 ['ENSG00000187474|ENST00000339223|FPR3'] 108106 12029 TDLPSQPQL True NCI_RA007_Epitope_Rep3 997.5080252427299 997.50692993586 54.441 2 -1.1961387150694163 0.36081055725811495 1.0 ['ENSG00000133275|ENST00000255641|CSNK1G2'] 57513 20709 LEKQKKEL True PC9_epitope_Rep1 1014.6073453611798 1014.60624993586 84.483 2 -1.1961664917825714 0.3608175211697457 1.0 ['TNIP3|p.R47K|1|0.17|ENSG00000050730|chr4:121161143-121161143|C/T|missense_variant', 'ENST00000539855.5_1_11:95532492-95564417:+|nuORF', 'nc|ENSG00000166037|Q86XR8-2|CEP57', 'nc|ENSG00000166037|Q86XR8-4|CEP57', 'nc|ENSG00000166037|Q86XR8-5|CEP57', 'ENSG00000166037|ENST00000325542|CEP57'] 108112 7612 TDLRVVQIY True H1975_Epitope_Rep2 1105.6131590176099 1105.61206993586 34.232 2 -1.1961802503205985 0.3608175211697457 1.0 ['ENST00000502187.5_1_14:98426074-98426648:-|nuORF'] 33889 18203 GLWRDLLFL True PC9_epitope_Rep2 1131.64406522307 1131.64296993586 75.325 2 -1.196186387504833 0.3608175211697457 1.0 ['ENST00000392619.1_3_17:72608517-72608742:-|nuORF'] 125072 24909 VLPGKKKKKT True NCI_RA007_Epitope_Rep2 1125.75976368165 1125.75811490379 104.73 3 -1.196189044974705 0.3608175211697457 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 107908 23361 TAVLHPRRLT True PC9_epitope_Rep5 1162.69347502698 1162.69183490379 94.842 3 -1.19625277337686 0.36082551594746715 1.0 ['ENST00000443602.2_1:149674009-149674339:+|nuORF'] 12074 13143 DIEQIRREYSS True H1975_Epitope_Rep3 1394.6790067313 1394.67790993586 55.803 2 -1.1962715254786804 0.3608335105251967 1.0 ['nc|ENSG00000128512|Q8N1I0-2|DOCK4', 'DOCK4|p.K1934Qfs*18|1|0.1|ENSG00000128512|chr7:111728375-111728376|-/G|frameshift_variant', 'nc|ENSG00000128512|Q8N1I0|DOCK4', 'ENSG00000128512|ENST00000428084|DOCK4', 'ENST00000476846.1_7:111503332-111846439:-|nuORF'] 20407 18882 EPLYGFHA True NCI_RA007_Epitope_Rep5 932.43921740692 932.43812993586 79.475 2 -1.1963660323196892 0.36083699173264294 1.0 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6', 'ENST00000487288.1_1_7:99711182-99711832:-|nuORF'] 92405 18163 RQRREFREKRL True NCI_RA007_Epitope_Rep3 1572.9073243870396 1572.90568490379 79.566 3 -1.1964421046534406 0.36083699173264294 1.0 ['ENSG00000104859|ENST00000221455|CLASRP', 'nc|ENSG00000104859|Q8N2M8-3|CLASRP', 'nc|ENSG00000104859|Q8N2M8-4|CLASRP'] 139507 14573 YTIPEEDR True PC9_epitope_Rep1 1021.47163973401 1021.47107496793 60.879 1 -1.1965471476123786 0.36086793396698347 1.0 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 112269 11660 TLYRNPQI True PC9_epitope_Rep1 1003.5450794577898 1003.5439899358599 49.728 2 -1.1965480132133217 0.36086793396698347 1.0 ['ENST00000357552.7_2_20:58439192-58439324:-|nuORF'] 97309 17622 SFSFLIWWHWY True H1975_Epitope_Rep1 1570.73975651306 1570.7386499358602 73.324 2 -1.1965573655098407 0.36086793396698347 1.0 ['ENST00000304661.5_1_X:119759908-119760061:-|nuORF'] 87605 6993 QTSFLDNTA True H1975_Epitope_Rep3 995.45598966987 995.45544496793 31.861 1 -1.1966015919554598 0.36086793396698347 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant'] 36077 15026 GVEEATRFTFF True PC9_epitope_Rep3 1302.6244519772997 1302.62334993586 62.926 2 -1.1966339633630934 0.36086793396698347 1.0 ['IL1F10|p.G93V|1|0.26|ENSG00000136697|chr2:113075183-113075183|G/T|missense_variant'] 45395 5460 ISDQRVQP True PC9_epitope_Rep3 941.4930438849299 941.49194993586 26.078 2 -1.1966367787809693 0.36086793396698347 1.0 ['nc|ENSG00000221866|Q9HCM2-3|PLXNA4'] 53522 6910 KVPEKLAA True PC9_epitope_Rep2 854.5225531080598 854.52144993586 31.982 2 -1.1966456196965571 0.36086793396698347 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 123139 5944 VHDWLYYYAYK True PC9_epitope_Rep4 1519.7136013348702 1519.71196490379 29.793 3 -1.1966541532956911 0.3608759270144195 1.0 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 133893 3956 WNAYMLFYQRV True NCI_RA007_Epitope_Rep2 1489.71764116949 1489.71598490379 20.025 3 -1.1967137346865195 0.3609169240773858 1.0 ['ENSG00000162402|ENST00000294383|USP24'] 3634 15670 AGPVRNLQP True PC9_epitope_Rep1 950.52976374682 950.52866993586 65.096 2 -1.196717076906875 0.3609169240773858 1.0 ['ENST00000360642.7_1_4:170541712-170541889:+|nuORF', 'ENST00000512813.5_1_4:170541712-170557134:+|nuORF'] 33721 5703 GLRGHHVP True NCI_RA007_Epitope_Rep2 871.47766860431 871.47656993586 26.798 2 -1.1967785525340502 0.3609374218398279 1.0 ['ENST00000525219.6_1_10:6008214-6019867:-|nuORF'] 18518 10189 EKQNSAYNMHS True H1975_Epitope_Rep3 1307.55644907047 1307.55481490379 44.237 3 -1.196826677175857 0.3609579190896017 1.0 ['nc|ENSG00000066027|Q15172-2|PPP2R5A', 'ENSG00000066027|ENST00000261461|PPP2R5A'] 59582 17999 LGRRQHSR True NCI_RA007_Epitope_Rep1 1008.5689432202 1008.56837496793 74.15 1 -1.1968524559648235 0.3609659105119676 1.0 ['ENST00000412918.1_1_1:226844949-226862702:-|nuORF'] 73376 4310 NEQLRLLK True NCI_RA007_Epitope_Rep2 1012.60292868708 1012.60182993586 21.404 2 -1.1969436265895435 0.36096731437717255 1.0 ['ENSG00000162654|ENST00000355754|GBP4'] 13222 15189 DLTQKREL True PC9_epitope_Rep3 1001.55055876105 1001.54946993586 63.57 2 -1.1969509465673684 0.36096731437717255 1.0 ['ENSG00000112561|ENST00000373033|TFEB', 'nc|ENSG00000112561|P19484-2|TFEB'] 85605 8186 QLNALQRHRR True H1975_Epitope_Rep3 1290.73813380362 1290.7370299358602 36.467 2 -1.1970266749762848 0.36096731437717255 1.0 ['ENSG00000125812|ENST00000338121|GZF1', 'nc|ENSG00000125812|Q9H116-4|GZF1'] 136051 1598 YFTHQLPGTVQ True H1975_Epitope_Rep3 1289.6404363946099 1289.63878490379 8.5895 3 -1.1970284374843758 0.36096731437717255 1.0 ['ZFHX4|p.P3276H|1|0.15|ENSG00000091656|chr8:76863541-76863541|C/A|missense_variant'] 20537 10161 EQAGPPVD True H1975_Epitope_Rep1 811.37119741675 811.37064496793 44.023 1 -1.1970936873884161 0.36096731437717255 1.0 ['ENSG00000205835|ENST00000442080|GMNC'] 140653 7397 YYPFVQEPP True H1975_Epitope_Rep3 1138.5335117145798 1138.5324099358602 33.432 2 -1.1970995095266053 0.36096731437717255 1.0 ['ENSG00000187742|ENST00000375807|SECISBP2', 'SECISBP2|p.L254Kfs*14|1|0.29|ENSG00000187742|chr9:89328841-89328845|TTCTC/-|frameshift_variant', 'ENST00000339901.8_1_9:91933491-91940532:+|nuORF'] 122986 8822 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 38.884 2 -1.1971336332047928 0.36096731437717255 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 98667 18475 SIQDRSQGAW True PC9_epitope_Rep6 1146.5417849825 1146.5406899358602 83.705 2 -1.19714390828298 0.36096731437717255 1.0 ['ENST00000593075.1_1_19:36606033-36606096:+|nuORF'] 55073 13558 LALINHPEL True H1975_Epitope_Rep2 1018.58113061334 1018.58002993586 57.288 2 -1.1971546599363654 0.3609753047827446 1.0 ['ENSG00000176922|ENST00000322101|OR51S1'] 124027 25609 VKMMKLHL True PC9_epitope_Rep1 998.5769142633799 998.57580993586 103.53 2 -1.1972134887908024 0.3609957987396219 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 71625 20278 MLNMLIVF True PC9_epitope_Rep4 979.5234817081899 979.52238993586 86.142 2 -1.1972584579561592 0.3610162921840029 1.0 ['ENSG00000162341|ENST00000294309|TPCN2', 'ENST00000442692.2_1_11:68822646-68853210:+|nuORF'] 105884 23243 SVLCIRCFL True PC9_epitope_Rep2 1052.5510934383599 1052.5499899358601 94.887 2 -1.197278779197596 0.3610187292140732 1.0 ['ENST00000291232.4_2_22:42319190-42319607:-|nuORF'] 123138 6275 VHDWLYYYAYK True PC9_epitope_Rep2 1519.7136013348702 1519.71196490379 29.533 3 -1.1973088092982702 0.3610187292140732 1.0 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 18661 11610 ELCEILCMP True PC9_epitope_Rep3 1049.4595611222899 1049.4584699358602 49.674 2 -1.1973092325948003 0.3610187292140732 1.0 ['nc|ENSG00000198901|O43663-3|PRC1', 'nc|ENSG00000198901|O43663-2|PRC1', 'nc|ENSG00000198901|O43663-4|PRC1', 'ENSG00000198901|ENST00000394249|PRC1', 'chr15:90981981-90984693|492|12.32|0.7|4.14|-|ENST00000557905|PRC1,PRC1', 'ENST00000557763.5_1_15:91524929-91537713:-|nuORF', 'PRC1|p.E226Kfs*52|1|0.16|ENSG00000198901|chr15:90981030-90981030|C/-|frameshift_variant', 'ENST00000560605.1_1_15:91524929-91537723:-|nuORF', 'ENST00000417173.6_1_15:91524704-91537723:-|nuORF'] 27946 10297 FQQQQTATL True PC9_epitope_Rep3 1063.52982331647 1063.5287299358602 44.555 2 -1.197325529919468 0.3610187292140732 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'ENST00000393501.5_1_3:124103736-124207203:+|nuORF', 'KALRN|p.R813Afs*7|1|0.24|ENSG00000160145|chr3:124413566-124413566|C/-|frameshift_variant', 'KALRN|p.Q684K|1|0.36|ENSG00000160145|chr3:124395228-124395228|C/A|missense_variant', 'nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN'] 37256 6021 GVVGNKPR True PC9_epitope_Rep5 825.4820852784098 825.48098993586 28.153 2 -1.1973454870111333 0.3610187292140732 1.0 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF', 'ENSG00000100056|ENST00000252137|ESS2'] 35467 6220 GTERHRQGK True NCI_RA007_Epitope_Rep1 1067.5584381061497 1067.5573499358602 28.23 2 -1.1974576677281727 0.3610392208344273 1.0 ['nc|ENSG00000182310|W5XKT8-3|SPACA6', 'nc|ENSG00000182310|W5XKT8-2|SPACA6', 'ENST00000331594.6_19:52196686-52197501:+|nuORF'] 117347 20677 VAAQRKPCL True PC9_epitope_Rep3 984.5538703196798 984.5527699358599 84.808 2 -1.1974998328242605 0.36104269550540724 1.0 ['ENST00000569981.2_1_16:29820228-29821657:-|nuORF'] 62809 22819 LMHLEDFPM True PC9_epitope_Rep5 1131.50928819603 1131.5081899358602 92.766 2 -1.1975423028459449 0.36104269550540724 1.0 ['GABRA2|p.P167L|1|0.21|ENSG00000151834|chr4:46310232-46310232|G/A|missense_variant'] 3266 15135 AGFIESTFKP True PC9_epitope_Rep1 1095.56006081559 1095.5589699358602 63.038 2 -1.19759476761845 0.3610461700026254 1.0 ['ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant'] 57792 9566 LEPFRVEQAP True PC9_epitope_Rep6 1184.61897267404 1184.6178699358602 47.092 2 -1.197598124388505 0.3610461700026254 1.0 ['ENST00000590666.5_1_19:36502237-36505114:-|nuORF', 'ENST00000468004.5_1_19:36501827-36504438:-|nuORF', 'nc|ENSG00000239382|Q3KRA9-3|ALKBH6', 'ENST00000392183.7_1_19:36501753-36505114:-|nuORF', 'ENSG00000239382|ENST00000378875|ALKBH6', 'nc|ENSG00000239382|Q3KRA9-2|ALKBH6'] 124967 9147 VLNDRLAT True PC9_epitope_Rep1 900.5028802926399 900.50178993586 40.034 2 -1.1976093632360214 0.3610621460450812 1.0 ['ENST00000247295.4_1_9:134133967-134134456:-|nuORF'] 89554 7135 RERRREQLRQW True NCI_RA007_Epitope_Rep1 1611.8818379151896 1611.88018490379 31.744 3 -1.1976277564893374 0.3610621460450812 1.0 ['PPP1R12C|p.S550Pfs*14|1|0.13|ENSG00000125503|chr19:55094380-55094380|A/-|frameshift_variant', 'nc|ENSG00000125503|Q9BZL4-2|PPP1R12C', 'nc|ENSG00000125503|Q9BZL4-3|PPP1R12C', 'nc|ENSG00000125503|Q9BZL4-4|PPP1R12C', 'ENSG00000125503|ENST00000263433|PPP1R12C'] 42300 17918 IEKKAGKNV True PC9_epitope_Rep5 985.5920296502098 985.59092993586 73.939 2 -1.1976489093936444 0.3610701337667208 1.0 ['nc|ENSG00000151164|Q6WBX8-3|RAD9B', 'nc|ENSG00000151164|Q6WBX8-4|RAD9B', 'nc|ENSG00000151164|Q6WBX8-2|RAD9B', 'nc|ENSG00000151164|Q6WBX8-1|RAD9B', 'ENSG00000151164|ENST00000409300|RAD9B', 'nc|ENSG00000151164|Q6WBX8|RAD9B'] 98312 6452 SIGAPSPGP True PC9_epitope_Rep5 781.39701824177 781.39646496793 29.792 1 -1.1977181340706964 0.3611031241014614 1.0 ['nc|ENSG00000144893|Q86YW9-4|MED12L', 'nc|ENSG00000144893|Q86YW9|MED12L', 'ENSG00000144893|ENST00000687756|MED12L', 'nc|ENSG00000144893|Q86YW9-2|MED12L', 'nc|ENSG00000144893|Q86YW9-3|MED12L'] 98412 24956 SIILFKVKFL True PC9_epitope_Rep2 1206.77401676346 1206.77236490379 101.66 3 -1.1978094622563915 0.3611111111111111 1.0 ['ENST00000333881.3_2_1:152573149-152573311:+|nuORF'] 38426 7828 HGSGCHLR True NCI_RA007_Epitope_Rep2 865.3977040314501 865.3966099358599 35.078 2 -1.1978459739156495 0.3611145835937695 1.0 ['nc|ENSG00000264575|Q96FQ7|LINC00526', 'ENST00000581067.1_1_18:5237365-5237662:-|nuORF'] 119469 15580 VEPYSSILT True NCI_RA007_Epitope_Rep3 1007.5175272972699 1007.5169749679301 68.859 1 -1.197849741086337 0.3611145835937695 1.0 ['ENST00000559655.1_1_15:35141948-35142251:-|nuORF'] 58562 12158 LFEAVGGS True PC9_epitope_Rep1 778.3861192049 778.38502993586 51.629 2 -1.1978840950635345 0.36111805590279517 1.0 ['ENSG00000147614|ENST00000285393|ATP6V0D2'] 34262 9347 GPLEDLQRLP True PC9_epitope_Rep1 1136.61897267404 1136.6178699358602 40.81 2 -1.1978980544099413 0.36111805590279517 1.0 ['ENSG00000178685|ENST00000313028|PARP10'] 4747 11996 ALEDLKFLPE True H1975_Epitope_Rep1 1173.6281403754099 1173.6270499358602 51.15 2 -1.1979163242239803 0.3611260422265835 1.0 ['ENST00000216019.11_1_22:38885294-38885507:-|nuORF'] 82522 21488 PVFFSHRF True H1975_Epitope_Rep1 1035.5290354708297 1035.5279299358601 89.297 2 -1.197960003906846 0.36114652866321656 1.0 ['ENST00000466482.5_1_3:98489996-98501720:+|nuORF', 'ENST00000495376.5_1_3:98489996-98502446:+|nuORF', 'ENST00000476833.5_1_3:98489996-98501153:+|nuORF'] 85681 15377 QLRDIKECL True PC9_epitope_Rep5 1116.59612905448 1116.59502993586 64.156 2 -1.198025803324574 0.36116701458768236 1.0 ['ARAP2-PDS5A|1|fusion', 'ENSG00000121892|ENST00000303538|PDS5A', 'PDS5A|p.H1047Mfs*4|2|0.32|ENSG00000121892|chr4:39849600-39849600|G/-|frameshift_variant'] 61101 14924 LLCPPKRQL True PC9_epitope_Rep6 1066.63212064038 1066.6310299358602 69.403 2 -1.1980344489205295 0.3611829852126848 1.0 ['ENST00000420509.1_1_2:206950883-206951051:+|nuORF'] 108925 10625 TESYPRVP True PC9_epitope_Rep3 947.4712458111899 947.47014993586 45.817 2 -1.1980425965587496 0.3611829852126848 1.0 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 53679 12279 KWYYFRTRLNK True H1975_Epitope_Rep3 1573.8517665735296 1573.8506699358602 52.41 2 -1.1980791755871592 0.3612034699132522 1.0 ['ENST00000483733.1_1_3:120424930-120428703:-|nuORF'] 41880 9462 IDVTYNVP True H1975_Epitope_Rep2 919.46509780159 919.46400993586 41.363 2 -1.1981563067377254 0.3612114545704536 1.0 ['ENSG00000160111|ENST00000443236|CPAMD8', 'nc|ENSG00000160111|Q8IZJ3-2|CPAMD8'] 111771 7106 TLQQFNIK True NCI_RA007_Epitope_Rep2 990.5498304850598 990.54872993586 32.261 2 -1.1981728413364459 0.3612194390280486 1.0 ['nc|ENSG00000132254|P53365-2|ARFIP2', 'nc|ENSG00000132254|P53365-3|ARFIP2', 'ENSG00000132254|ENST00000396777|ARFIP2'] 121013 10017 VGFDASTT True H1975_Epitope_Rep3 796.3602983798801 796.35920993586 43.568 2 -1.198223228134472 0.36122637736226376 1.0 ['ENSG00000152527|ENST00000282406|PLEKHH2', 'nc|ENSG00000152527|Q8IVE3-2|PLEKHH2'] 71271 14800 MGRQMMPS True NCI_RA007_Epitope_Rep5 936.39796392524 936.39686993586 63.6 2 -1.1982324698838491 0.36122637736226376 1.0 ['ENSG00000196782|ENST00000509479|MAML3'] 63268 11663 LPALTTLT True NCI_RA007_Epitope_Rep3 828.4956696538801 828.49456993586 52.994 2 -1.1982389997378637 0.36122637736226376 1.0 ['ENST00000559133.5_3_15:48703189-48720097:-|nuORF', 'ENSG00000166147|ENST00000316623|FBN1'] 134719 19947 WWRWLTFWRRL True PC9_epitope_Rep5 1704.9153698895998 1704.9137249037901 81.781 3 -1.1982523669764311 0.36122637736226376 1.0 ['nc|ENSG00000164284|Q8TAA5-2|GRPEL2'] 90565 25569 RKGHIVIKD True PC9_epitope_Rep1 1064.6454622054 1064.6443699358601 103.36 2 -1.19828911472508 0.36122984626921634 1.0 ['ENST00000514179.5_1_5:130834202-130867847:-|nuORF'] 36312 15549 GVGRVEQQP True H1975_Epitope_Rep2 968.5039429218 968.50284993586 64.964 2 -1.1983070475086248 0.36122984626921634 1.0 ['ENST00000563785.5_1_16:88722464-88729488:-|nuORF'] 27150 8241 FLRRQYWHWLR True NCI_RA007_Epitope_Rep2 1659.8898834177498 1659.8882249037902 36.692 3 -1.1983322546325081 0.36123226894957194 1.0 ['ENST00000513055.1_1_5:92921088-92921313:-|nuORF'] 124666 23591 VLILILCLKV True NCI_RA007_Epitope_Rep4 1125.75592417117 1125.75537496793 102.34 1 -1.1983374352661924 0.36123226894957194 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 60225 14183 LIDISSIPSY True H1975_Epitope_Rep2 1106.58594121026 1106.5848499358601 59.707 2 -1.1983509284005565 0.36123226894957194 1.0 ['RASGRP3|p.K203Sfs*5|1|0.2|ENSG00000152689|chr2:33523969-33523969|A/-|frameshift_variant', 'nc|ENSG00000152689|Q8IV61-2|RASGRP3', 'ENSG00000152689|ENST00000403687|RASGRP3'] 48641 10713 KEKEVVSAL True NCI_RA007_Epitope_Rep4 1001.5757108797299 1001.5746099358599 48.054 2 -1.1983608442599216 0.36123226894957194 1.0 ['nc|ENSG00000107263|Q13905-3|RAPGEF1', 'nc|ENSG00000107263|Q13905-2|RAPGEF1', 'nc|ENSG00000107263|Q13905|RAPGEF1', 'nc|ENSG00000107263|Q13905-4|RAPGEF1', 'ENSG00000107263|ENST00000683357|RAPGEF1'] 107732 3737 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 19.37 2 -1.198370045631827 0.36123226894957194 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 20219 7906 ENTPLVPSG True PC9_epitope_Rep5 912.4552613938799 912.45471496793 35.352 1 -1.198391107117226 0.36124025194961007 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'nc|ENSG00000204469|P48634-4|PRRC2A'] 108079 10220 TDLILSTAGVP True NCI_RA007_Epitope_Rep2 1085.59684024713 1085.59574993586 44.344 2 -1.1985294667692832 0.36126073209442994 1.0 ['ENSG00000181616|ENST00000322653|OR52H1'] 37182 19959 GVTSQRPG True H1975_Epitope_Rep3 800.41406528824 800.41296993586 83.532 2 -1.1985722411202022 0.361293708915494 1.0 ['ENST00000401419.7_1_22:37425582-37425828:+|nuORF'] 63208 8809 LNVSYSGLVN True H1975_Epitope_Rep3 1064.55022440788 1064.54912993586 38.891 2 -1.1986184142412475 0.3613141878803784 1.0 ['ENSG00000255151|ENST00000527482|GLYATL1B'] 27545 18245 FPKAQEKSV True PC9_epitope_Rep4 1032.56039516876 1032.55928993586 78.248 2 -1.1986407989331198 0.36133466633341665 1.0 ['ENSG00000168939|ENST00000695325|SPRY3'] 8643 9708 AVAQFKKY True H1975_Epitope_Rep1 953.5334521449299 953.53234993586 42.269 2 -1.1987886309759472 0.36141762787268344 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 122731 11449 VGVAWLWG True H1975_Epitope_Rep3 886.4701236123799 886.46902993586 49.158 2 -1.1989284332847914 0.3614290712786164 1.0 ['OR4C3|p.G149W|1|0.23|ENSG00000176547|chr11:48325466-48325466|G/T|missense_variant'] 56250 10654 LDQARSSREL True H1975_Epitope_Rep1 1173.61019889549 1173.60910993586 45.937 2 -1.1989422334502726 0.3614290712786164 1.0 ['TRPC5|p.Q824Kfs*81|1|0.49|ENSG00000072315|chrX:111776765-111776765|G/-|frameshift_variant', 'ENSG00000072315|ENST00000262839|TRPC5'] 137300 18815 YLHDQNPVL True PC9_epitope_Rep4 1097.5505587610498 1097.54946993586 80.457 2 -1.1990001241445083 0.3614290712786164 1.0 ['ENST00000557624.1_1_14:24808148-24809140:-|nuORF', 'nc|ENSG00000129465|Q9Y572-3|RIPK3', 'nc|ENSG00000129465|Q9Y572-2|RIPK3', 'ENSG00000129465|ENST00000216274|RIPK3'] 97114 6029 SFDWSMDAVP True NCI_RA007_Epitope_Rep3 1153.47501086229 1153.47337490379 30.695 3 -1.1990610848882646 0.3614575263039512 1.0 ['ENSG00000179104|ENST00000321196|TMTC2', 'ENST00000551915.5_1_12:83081308-83379891:+|nuORF'] 36759 14764 GVPDRMAL True PC9_epitope_Rep2 857.4429228883699 857.44182993586 62.055 2 -1.1990699356811385 0.3614575263039512 1.0 ['nc|ENSG00000158966|Q5VU97-2|CACHD1', 'ENSG00000158966|ENST00000651257|CACHD1'] 75079 996 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 5.4897 3 -1.1991302503865249 0.3614734842805018 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 114995 19064 TTKRVRLG True H1975_Epitope_Rep2 929.5770482924098 929.57594993586 79.141 2 -1.1991652996919058 0.3614734842805018 1.0 ['TAF5|p.G565Dfs*3|1|0.23|ENSG00000148835|chr10:103385355-103385356|GA/-|frameshift_variant', 'nc|ENSG00000148835|Q15542-2|TAF5', 'ENSG00000148835|ENST00000369839|TAF5'] 87574 19305 QTPKKPGLRR True H1975_Epitope_Rep3 1179.7200241279897 1179.71836490379 80.926 3 -1.199180574732433 0.3614814629696735 1.0 ['ENSG00000111276|ENST00000228872|CDKN1B'] 76980 6883 NVRLLEQILNN True H1975_Epitope_Rep1 1324.7462984454796 1324.7446649037902 31.518 3 -1.1991949843162768 0.3614894414594527 1.0 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 121893 6216 VGPGPSGQL True PC9_epitope_Rep2 810.42356734278 810.42246993586 29.307 2 -1.199240485221066 0.36149741974984695 1.0 ['ENST00000339738.9_1_20:30458201-30458438:-|nuORF'] 53718 17542 KYEDLYAFSYN True H1975_Epitope_Rep3 1411.6295969273897 1411.6284899358602 73.254 2 -1.1993052217805775 0.36150885873503763 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 78625 5709 PDTLSPADQLK True NCI_RA007_Epitope_Rep2 1183.6084675599898 1183.60736993586 26.822 2 -1.1993707463858219 0.36150885873503763 1.0 ['ENSG00000168924|ENST00000302787|LETM1', 'ENST00000511977.1_1_4:1824675-1834605:-|nuORF', 'WHSC1-LETM1|1|fusion'] 71500 14875 MKMKKAHK True NCI_RA007_Epitope_Rep3 1000.56741220884 1000.56630993586 65.942 2 -1.1993725344698445 0.36150885873503763 1.0 ['ENST00000456678.1_1_1:198166911-198167118:-|nuORF'] 101976 15251 SPMYFFLRNLY True PC9_epitope_Rep3 1449.7114931598899 1449.7103899358601 63.811 2 -1.1995066435907553 0.3615227005821943 1.0 ['OR10A2|p.S54Y|1|0.15|ENSG00000170790|chr11:6869915-6869915|C/A|missense_variant'] 111691 11110 TLPPDLKA True PC9_epitope_Rep1 853.49091862661 853.48982993586 47.62 2 -1.1995236259849225 0.3615227005821943 1.0 ['nc|ENSG00000182511|P07332-2|FES', 'nc|ENSG00000182511|P07332-4|FES', 'nc|ENSG00000182511|P07332-3|FES', 'ENSG00000182511|ENST00000328850|FES', 'ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 93683 20224 RTKRERDQLYY True PC9_epitope_Rep1 1526.7953738962199 1526.79426993586 82.621 2 -1.1995246706617462 0.3615227005821943 1.0 ['ENSG00000198890|ENST00000370078|PRMT6'] 7687 12748 ASPLTPCSV True PC9_epitope_Rep4 873.42660411789 873.4260549679301 56.896 1 -1.1996578583714965 0.3615227005821943 1.0 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 87573 19528 QTPFGVVTFLQ True PC9_epitope_Rep6 1235.65502382959 1235.65392993586 87.777 2 -1.199681566544029 0.3615227005821943 1.0 ['nc|ENSG00000107882|Q9UMX1-2|SUFU', 'nc|ENSG00000107882|Q9UMX1-3|SUFU', 'ENSG00000107882|ENST00000369902|SUFU'] 56928 9297 LEDSAEEKVEE True NCI_RA007_Epitope_Rep2 1276.56705624048 1276.56594993586 40.771 2 -1.1997186385759924 0.3615227005821943 1.0 ['ENSG00000168497|ENST00000304141|CAVIN2'] 99327 13281 SLDPHLPLAS True PC9_epitope_Rep5 1048.5553097883198 1048.5542099358602 56.095 2 -1.199767422322438 0.3615227005821943 1.0 ['PCDHB12|p.Q494L|1|0.24|ENSG00000120328|chr5:141210388-141210388|A/T|missense_variant'] 25481 10500 FENYEMNSFE True PC9_epitope_Rep1 1308.49686850568 1308.4957699358602 45.278 2 -1.1997874304280343 0.3615227005821943 1.0 ['nc|ENSG00000143473|O95259-2|KCNH1', 'ENSG00000143473|ENST00000271751|KCNH1'] 66322 13620 LSQLQENLK True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 57.412 2 -1.1998089568265173 0.36153865374044275 1.0 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 40550 16776 HSRWSWRRKRQ True H1975_Epitope_Rep1 1581.85014386409 1581.8490499358602 69.929 2 -1.1998162149473952 0.36153865374044275 1.0 ['ENST00000496846.1_1_7:30411132-30411270:+|nuORF'] 37097 7191 GVSPAVMIR True PC9_epitope_Rep1 928.5164221818 928.51532993586 32.473 2 -1.1998660279859021 0.3615591229933163 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 35076 25131 GRKAGPPP True NCI_RA007_Epitope_Rep5 778.4449714936999 778.44386993586 104.17 2 -1.199884071252414 0.36156709891812205 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 128031 23507 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75544490379 103.55 3 -1.200040475503152 0.36162504528589456 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 80348 16371 PLGESPHTLS True PC9_epitope_Rep5 1036.5189242796 1036.5178299358602 67.967 2 -1.2001442296061886 0.3616455126923846 1.0 ['ENSG00000102313|ENST00000218436|ITIH6'] 126183 16278 VPGFVCFI True PC9_epitope_Rep3 880.4516966669199 880.45058993586 67.751 2 -1.2001588444152878 0.3616534872390661 1.0 ['ENSG00000158125|ENST00000379416|XDH'] 83531 9041 QDLKELER True H1975_Epitope_Rep1 1029.5454733806098 1029.54436993586 39.683 2 -1.2002331660929928 0.36167395377888817 1.0 ['SLIT2|p.N183Tfs*60|1|0.21|ENSG00000145147|chr4:20486207-20486207|A/-|frameshift_variant', 'ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2', 'SLIT2|p.A421Pfs*21|1|0.12|ENSG00000145147|chr4:20523888-20523888|G/-|frameshift_variant'] 60847 25599 LKLITTSVF True PC9_epitope_Rep5 1020.6219327961601 1020.62082993586 103.78 2 -1.2002907324035244 0.36169335698403576 1.0 ['ENST00000530930.1_1_10:126822157-126826602:-|nuORF'] 89861 5434 RFLQKHNEV True PC9_epitope_Rep4 1169.63054041725 1169.62888490379 27.633 3 -1.2003889026031718 0.36169335698403576 1.0 ['NPAS2|p.G54R|1|0.44|ENSG00000170485|chr2:100925273-100925273|G/A|missense_variant'] 58942 5478 LFWCYYLKDE True PC9_epitope_Rep1 1378.62676047642 1378.62511490379 25.902 3 -1.2003979397775564 0.36169335698403576 1.0 ['HECTD1|p.L328Ffs*29|1|0.3|ENSG00000092148|chr14:31173328-31173329|-/AA|frameshift_variant'] 55134 5685 LAMERDGYS True PC9_epitope_Rep6 1040.45969515132 1040.4585899358601 29.984 2 -1.2004050791899017 0.36169335698403576 1.0 ['PSMB6|p.S203Y|1|0.13|ENSG00000142507|chr17:4798310-4798310|C/A|missense_variant'] 114705 5144 TSSRTQLP True PC9_epitope_Rep6 888.4664947839199 888.46538993586 27.509 2 -1.2004190053172903 0.3617013303353944 1.0 ['ENSG00000101337|ENST00000398022|TM9SF4', 'TM9SF4-HM13|8|fusion', 'TM9SF4-HM13|7|fusion', 'TM9SF4-HM13|2|fusion', 'TM9SF4-HM13|9|fusion', 'TM9SF4-HM13|1|fusion', 'TM9SF4-HM13|3|fusion'] 80421 14091 PLKEEEYRKLR True PC9_epitope_Rep3 1459.8147123584697 1459.81360993586 59.286 2 -1.2004501784801418 0.3617047853404449 1.0 ['nc|ENSG00000164627|Q6ZMV9-3|KIF6', 'ENSG00000164627|ENST00000287152|KIF6'] 4548 19385 AKVIRSLHGR True NCI_RA007_Epitope_Rep2 1135.69380938015 1135.6927099358602 80.307 2 -1.2004560397748327 0.3617047853404449 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 103505 14132 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 61.048 2 -1.2004723348851767 0.36171063149480415 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 119393 17388 VENWPSCHCL True PC9_epitope_Rep5 1186.48994973378 1186.4888499358601 71.884 2 -1.2004772955950387 0.36171063149480415 1.0 ['nc|ENSG00000168781|Q6PFW1-7|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-4|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-3|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-2|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1|PPIP5K1', 'ENSG00000168781|ENST00000420765|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-5|PPIP5K1', 'nc|ENSG00000168781|Q6PFW1-6|PPIP5K1', 'ENST00000488768.5_1_15:43865553-43876720:-|nuORF'] 36514 11566 GVKKLFIF True NCI_RA007_Epitope_Rep4 950.5953241254998 950.59422993586 51.437 2 -1.2004859632821019 0.36171063149480415 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 25852 8915 FGGAKVAG True NCI_RA007_Epitope_Rep5 705.3809742548099 705.38042496793 40.954 1 -1.2005521986766883 0.36171063149480415 1.0 ['ENST00000378097.5_1_1:6052749-6100615:+|nuORF'] 131538 25621 VVVGVGLIVG True PC9_epitope_Rep5 910.5851533646199 910.5846049679301 103.88 1 -1.2005950475082094 0.36171063149480415 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 131536 25590 VVVGVGLIVG True PC9_epitope_Rep3 910.5851533646199 910.5846049679301 103.92 1 -1.2006252160741764 0.36171063149480415 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 63226 21207 LNYRNIWKNLL True NCI_RA007_Epitope_Rep1 1445.8143184356497 1445.8132299358601 86.769 2 -1.2006434454306478 0.36171063149480415 1.0 ['ENSG00000092096|ENST00000354772|SLC22A17', 'nc|ENSG00000092096|Q8WUG5|SLC22A17'] 100514 14583 SLPPPQSQK True PC9_epitope_Rep5 980.52909504048 980.52798993586 61.095 2 -1.200708697658951 0.3617175400909227 1.0 ['ENST00000596279.1_1_19:17337742-17339154:+|nuORF', 'ENST00000594283.5_1_19:17337742-17339731:+|nuORF', 'ENSG00000099330|ENST00000215061|OCEL1'] 47816 21009 IYSFAITLWQM True PC9_epitope_Rep1 1371.6896950861499 1371.6885899358601 85.639 2 -1.2007842257949586 0.3617175400909227 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 23315 12118 EVSSKREFP True PC9_epitope_Rep1 1077.5454733806098 1077.54436993586 51.474 2 -1.2007907157049231 0.3617175400909227 1.0 ['TGS1|p.C357F|1|0.42|ENSG00000137574|chr8:55786968-55786968|G/T|missense_variant'] 118167 5751 VAVPPEATV True PC9_epitope_Rep2 881.4858332461699 881.48472993586 27.514 2 -1.2007980038601431 0.3617175400909227 1.0 ['nc|ENSG00000100239|O75170-6|PPP6R2', 'nc|ENSG00000100239|O75170-2|PPP6R2', 'nc|ENSG00000100239|O75170-4|PPP6R2', 'nc|ENSG00000100239|O75170-3|PPP6R2', 'ENSG00000100239|ENST00000612753|PPP6R2', 'nc|ENSG00000100239|O75170|PPP6R2', 'ENST00000470046.1_1_22:50881704-50882673:+|nuORF'] 74867 10901 NLQNQASLSF True PC9_epitope_Rep5 1120.5512870370399 1120.55018993586 46.918 2 -1.2008353464635702 0.36172896554308054 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 20557 6012 EQDLVWKFRYY True NCI_RA007_Epitope_Rep1 1545.76161415645 1545.7599749037902 27.43 3 -1.2008521743135805 0.36172896554308054 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 117290 16202 VAADIVTIFNL True PC9_epitope_Rep2 1174.65977485686 1174.6581149037902 67.571 3 -1.200853147565062 0.36172896554308054 1.0 ['ENSG00000169330|ENST00000305428|MINAR1', 'MINAR1|p.G743Afs*7|1|0.14|ENSG00000169330|chr15:79458373-79458373|G/-|frameshift_variant'] 66444 5153 LSRPSASSLF True NCI_RA007_Epitope_Rep5 1063.56620882519 1063.5651099358602 26.516 2 -1.2009882932523412 0.36174490777165835 1.0 ['ENST00000254657.7_1_2:239161823-239162174:-|nuORF'] 86550 26084 QRAPKPLPRV True PC9_epitope_Rep5 1160.71421047156 1160.71310993586 105.96 2 -1.201015708086144 0.36174490777165835 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 131266 6991 VVQHGVGL True PC9_epitope_Rep3 807.4602872046698 807.45918993586 31.903 2 -1.201034651182682 0.3617483609116453 1.0 ['ENST00000523869.1_2_8:19675786-19680957:+|nuORF', 'ENSG00000104613|ENST00000397977|INTS10'] 125298 19875 VLRSWWPRWWW True H1975_Epitope_Rep3 1656.8466216234397 1656.8455299358602 83.206 2 -1.2010411506547742 0.3617483609116453 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 110874 7521 TLAEAQPP True H1975_Epitope_Rep2 825.4232329896099 825.4226849679301 33.88 1 -1.2010617199693225 0.36175181387914135 1.0 ['nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18', 'nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18', 'ENSG00000104880|ENST00000668164|ARHGEF18'] 22528 9807 ETLEALILK True H1975_Epitope_Rep3 1028.6117620352798 1028.6106699358602 42.749 2 -1.2011204435663645 0.36175181387914135 1.0 ['ENSG00000148606|ENST00000372371|POLR3A'] 12452 21331 DKNSFFHY True NCI_RA007_Epitope_Rep3 1056.46649478392 1056.46538993586 92.729 2 -1.2011851276377925 0.3618097355078798 1.0 ['ENSG00000166192|ENST00000340912|SENP8'] 120235 13579 VFNNVTKN True NCI_RA007_Epitope_Rep1 934.4872302285 934.48612993586 56.829 2 -1.2012413125620611 0.36184268035315126 1.0 ['ENSG00000166897|ENST00000402918|ELFN2'] 23118 5811 EVLVPEGP True NCI_RA007_Epitope_Rep2 838.4436340810198 838.44252993586 27.222 2 -1.2013444946050957 0.36185064935064937 1.0 ['ENSG00000162729|ENST00000314485|IGSF8', 'nc|ENSG00000162729|Q969P0-3|IGSF8'] 96583 21741 SELRVQLRRAR True PC9_epitope_Rep6 1382.82186342758 1382.8207699358602 96.519 2 -1.2014112743378371 0.3618960802187785 1.0 ['ENSG00000166592|ENST00000299759|RRAD', 'ENST00000567791.1_1_16:66955609-66957656:-|nuORF'] 38298 27635 HFLRRKMFARQ True PC9_epitope_Rep3 1488.82484063304 1488.8237499358602 114.18 2 -1.2014485627837537 0.3619165355510602 1.0 ['ENST00000398559.6_1_3:69093733-69096555:-|nuORF'] 44222 23450 ILSMTAQDPD True H1975_Epitope_Rep1 1089.50122561013 1089.50012993586 97.448 2 -1.2015068619754339 0.3619199840167824 1.0 ['ENSG00000262576|ENST00000571252|PCDHGA4', 'nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4', 'PCDHGA4|p.S512T|1|0.73|ENSG00000262576|chr5:141356642-141356642|G/C|missense_variant'] 70096 17301 LYIPSDFF True H1975_Epitope_Rep3 1000.4905842734399 1000.49007496793 72.2 1 -1.201571935406287 0.3619199840167824 1.0 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 79880 19163 PILERATCR True H1975_Epitope_Rep3 1057.57024865981 1057.5691499358602 80.358 2 -1.2016544803233675 0.36196089204105586 1.0 ['ENST00000357508.5_1_1:45190567-45191072:+|nuORF'] 9314 6521 AVSGLSHV True PC9_epitope_Rep1 768.41300265908 768.41190993586 29.886 2 -1.2016546720085728 0.36196089204105586 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'nc|ENSG00000240303|Q709F0-2|ACAD11'] 5116 14266 ALLYPRTPSP True NCI_RA007_Epitope_Rep1 1113.61824439805 1113.6171499358602 59.528 2 -1.2016761355919199 0.36196433922685045 1.0 ['NTN5|p.T60Nfs*60|1|0.32|ENSG00000142233|chr19:48670808-48670809|-/T|frameshift_variant'] 8651 12849 AVAQFKKY True PC9_epitope_Rep6 953.5334521449299 953.53234993586 60.935 2 -1.2016916391593833 0.36196433922685045 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 116116 13540 TVSPQFLIDKN True NCI_RA007_Epitope_Rep2 1260.6714021697198 1260.6703099358601 57.31 2 -1.2017235599795566 0.3619723058097866 1.0 ['ENST00000588919.5_1_19:1105807-1106568:+|nuORF'] 133551 20673 WHRELRKAK True PC9_epitope_Rep3 1222.7047084170197 1222.70305490379 84.793 3 -1.201816843735924 0.36199275814708454 1.0 ['ENSG00000101413|ENST00000373433|RPRD1B'] 87585 19090 QTPRRLKRRRR True PC9_epitope_Rep1 1521.9552776389698 1521.9536249037901 78.22 3 -1.2019009339474562 0.36200417015219805 1.0 ['ENST00000321448.12_1_11:74648098-74660104:-|nuORF', 'ENST00000530562.5_1_11:74648079-74660104:-|nuORF'] 80345 11525 PLGDRIIESFF True H1975_Epitope_Rep3 1292.6764875501597 1292.67538993586 49.457 2 -1.2019555118438834 0.36200417015219805 1.0 ['ENSG00000166869|ENST00000300113|CHP2'] 115364 15851 TVEHHELL True PC9_epitope_Rep1 976.4977949122 976.49668993586 65.783 2 -1.201995471968901 0.36200417015219805 1.0 ['GCA|p.R145L|1|0.28|ENSG00000115271|chr2:162356885-162356885|G/T|missense_variant'] 116708 26520 TYKMCPIPPK True PC9_epitope_Rep3 1176.6035229340398 1176.60187490379 108.45 3 -1.2020532146388216 0.3620076159560522 1.0 ['ENSG00000172346|ENST00000306149|CSDC2'] 59826 5963 LHDLQSFGYI True NCI_RA007_Epitope_Rep2 1191.59242357303 1191.5913299358601 27.805 2 -1.2020639461462468 0.3620076159560522 1.0 ['chr5:90929313-90965415|333|22.99|0.23|6.64|+|1|TE_info:L1PA2,L1PA2_dup1646,L1,LINE,donor,-,90923631,90929313|None,ADGRV1|3'] 96425 18744 SEIEILAVDLP True PC9_epitope_Rep5 1197.6492697428098 1197.64816993586 77.111 2 -1.2020925635552093 0.36201558130243705 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 13466 9179 DPAYFDENWL True H1975_Epitope_Rep2 1268.5349682665599 1268.53333490379 40.26 3 -1.2021521052332707 0.3620224719101124 1.0 ['ENSG00000168172|ENST00000307602|HOOK3', 'HOOK3|p.K325Rfs*3|1|0.22|ENSG00000168172|chr8:42968062-42968062|A/-|frameshift_variant', 'ENST00000527306.1_1_8:42752256-42852891:+|nuORF'] 13956 5278 DRLRRMREWWV True NCI_RA007_Epitope_Rep5 1601.8361335927298 1601.83447490379 26.997 3 -1.2021599890179782 0.3620224719101124 1.0 ['ENSG00000106484|ENST00000223215|MEST'] 100620 20701 SLQPASEDTL True PC9_epitope_Rep3 1059.50841916555 1059.50732993586 84.9 2 -1.2021718986168934 0.3620224719101124 1.0 ['ENST00000448467.1_1_22:30939341-30940067:+|nuORF'] 46405 12547 ITKEKCKWY True NCI_RA007_Epitope_Rep2 1197.6216155263298 1197.6205099358601 53.419 2 -1.2022141395078116 0.3620224719101124 1.0 ['nc|ENSG00000168658|Q502W6-2|VWA3B', 'nc|ENSG00000168658|Q502W6-8|VWA3B', 'ENST00000409460.5_1_2:98703705-98907168:+|nuORF', 'ENSG00000168658|ENST00000477737|VWA3B', 'nc|ENSG00000168658|Q502W6-6|VWA3B', 'ENST00000422503.6_1_2:98732117-98833284:+|nuORF'] 22049 8807 ESRLWRQMLHK True H1975_Epitope_Rep1 1482.7877864179798 1482.78668993586 38.803 2 -1.202248112360247 0.36202591695588127 1.0 ['nc|ENSG00000161249|Q6E0U4-9|DMKN'] 120959 4872 VGENIEPV True NCI_RA007_Epitope_Rep1 855.4337976733099 855.43270993586 23.03 2 -1.202266840361033 0.36202591695588127 1.0 ['nc|ENSG00000064933|P54277-4|PMS1', 'nc|ENSG00000064933|P54277-2|PMS1', 'nc|ENSG00000064933|P54277-3|PMS1', 'ENSG00000064933|ENST00000441310|PMS1', 'ENST00000421722.5_1_2:190656520-190720594:+|nuORF'] 97099 15675 SFASPNMHSV True PC9_epitope_Rep1 1075.47567956863 1075.4745899358602 65.116 2 -1.2023273161452837 0.3620338813777262 1.0 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'ZNF462|p.A1171Pfs*6|1|0.21|ENSG00000148143|chr9:106927423-106927423|G/-|frameshift_variant'] 27546 23286 FPKERPQR True H1975_Epitope_Rep1 1056.5828619488398 1056.5817699358602 96.793 2 -1.202363863494505 0.36203732600961236 1.0 ['ENST00000490939.1_1_6:25087010-25108891:-|nuORF', 'nc|ENSG00000168405|Q9Y471-4|CMAHP', 'nc|ENSG00000168405|Q9Y471|CMAHP'] 139772 14720 YVCGISSK True H1975_Epitope_Rep3 855.41603943419 855.41549496793 61.995 1 -1.2023654829625332 0.36203732600961236 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 75058 659 NMGVHKAL True NCI_RA007_Epitope_Rep1 868.45890730568 868.45780993586 3.4735 2 -1.2023851763194837 0.36204528999076224 1.0 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000456826.2_1_1:149262279-149263299:+|nuORF'] 10697 16488 CSQYRLPGCPR True PC9_epitope_Rep4 1278.5961461378197 1278.59449490379 71.391 3 -1.2024246077420795 0.3620487342088181 1.0 ['IGFBP7-SPINK2|1|fusion', 'ENSG00000128040|ENST00000506738|SPINK2', 'nc|ENSG00000128040|P20155|SPINK2'] 31969 5645 GESRGTKDLP True H1975_Epitope_Rep3 1058.5356369729 1058.53452993586 26.744 2 -1.2024282901460035 0.3620487342088181 1.0 ['nc|ENSG00000213689|Q9NSU2-2|TREX1', 'ENSG00000213689|ENST00000625293|TREX1', 'nc|ENSG00000213689|Q9NSU2-1|TREX1'] 5571 17004 ANNLELEEM True PC9_epitope_Rep1 1061.46992548185 1061.4688299358602 70.228 2 -1.2025256641184956 0.3621066297170106 1.0 ['ENSG00000122557|ENST00000311350|HERPUD2'] 9606 12747 AYESIRVSS True PC9_epitope_Rep5 1010.50327421546 1010.50216993586 54.038 2 -1.2026365894482545 0.3621645237798028 1.0 ['FSCB|p.P409Qfs*4|1|0.14|ENSG00000189139|chr14:44505762-44505762|G/-|frameshift_variant', 'ENSG00000189139|ENST00000340446|FSCB'] 126064 14520 VPAYALKLL True NCI_RA007_Epitope_Rep3 986.6164534929 986.61534993586 64.418 2 -1.2027517655275033 0.3621974510366866 1.0 ['ENSG00000168038|ENST00000301831|ULK4'] 130272 12262 VTSVLLCFIF True H1975_Epitope_Rep3 1140.62530392444 1140.62420993586 52.344 2 -1.2027867810426804 0.3622008912411219 1.0 ['ENSG00000108622|ENST00000579788|ICAM2', 'MSI2-ICAM2|1|fusion', 'MSI2-ICAM2|2|fusion'] 8475 9010 ATTPDWFSYFF True NCI_RA007_Epitope_Rep2 1380.60265390356 1380.60154993586 39.648 2 -1.202827133516335 0.3622008912411219 1.0 ['SVA_D_dup775|chrX:71340697-71342586:-|1.2848477161067438|0.0874932661462981|3.88|488.0|34|3|sense'] 85496 16465 QLIEKITQV True PC9_epitope_Rep5 1070.63356010902 1070.6324699358602 68.331 2 -1.2028499799144476 0.3622088523853509 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1', 'ENST00000472131.5_1_1:15653545-15656069:+|nuORF', 'ENST00000459961.1_1_1:15653545-15655159:+|nuORF'] 25238 9959 FEDDEESTIY True PC9_epitope_Rep3 1246.48774329062 1246.4866499358602 43.261 2 -1.2029192438271177 0.36221681333083694 1.0 ['nc|ENSG00000145868|Q6PIJ6-3|FBXO38', 'nc|ENSG00000145868|Q6PIJ6-2|FBXO38', 'ENSG00000145868|ENST00000340253|FBXO38'] 40547 18776 HSRRIFKRKRC True NCI_RA007_Epitope_Rep4 1485.8575377436496 1485.85588490379 81.234 3 -1.2029360120374775 0.36222025288016274 1.0 ['ENST00000539109.1_1_12:67664295-67664358:+|nuORF'] 85834 22475 QMLQISNLYL True PC9_epitope_Rep6 1221.64274489373 1221.64108490379 99.445 3 -1.2029893080085925 0.36222025288016274 1.0 ['ENSG00000182771|ENST00000327946|GRID1'] 103503 13210 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 57.492 2 -1.2030602550800964 0.36222821338525674 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 135470 8176 YECRECWKFFR True NCI_RA007_Epitope_Rep2 1565.6907747986495 1565.6896699358601 36.439 2 -1.2030987264907713 0.3622361736916337 1.0 ['ZNF419|p.G489W|1|0.86|ENSG00000105136|chr19:57494022-57494022|G/T|missense_variant'] 122890 21973 VGVRARTK True PC9_epitope_Rep5 885.55083354457 885.54972993586 89.551 2 -1.2033096857133032 0.3623190214677983 1.0 ['nc|ENSG00000169598|O76075-3|DFFB'] 37339 8186 GVWCVWPRFFY True NCI_RA007_Epitope_Rep4 1458.6906981456596 1458.68960993586 38.274 2 -1.2033455134337312 0.36233946156438385 1.0 ['ENST00000526607.1_2_9:102669309-102677517:+|nuORF'] 43231 5696 IGYPNFIMDPK True NCI_RA007_Epitope_Rep2 1293.64274489373 1293.64108490379 26.771 3 -1.2033832899486285 0.3623599011507451 1.0 ['nc|ENSG00000117298|P42892-3|ECE1', 'nc|ENSG00000117298|P42892-4|ECE1', 'ENSG00000117298|ENST00000374893|ECE1', 'nc|ENSG00000117298|P42892-2|ECE1', 'ENST00000526194.5_1_1:21560049-21616919:-|nuORF'] 58980 14064 LGACGHSR True H1975_Epitope_Rep3 799.3759059577101 799.3753549679301 59.421 1 -1.2033914697338346 0.3623792526770337 1.0 ['nc|ENSG00000162636|Q5T8I3-2|EEIG2', 'ENSG00000162636|ENST00000370035|EEIG2'] 30749 10488 GANVSNIQL True PC9_epitope_Rep4 914.48214484806 914.48104993586 48.058 2 -1.203401894419702 0.3623792526770337 1.0 ['CCDC91-PDZRN4|1|fusion', 'nc|ENSG00000123106|Q7Z6B0-3|CCDC91', 'nc|ENSG00000123106|Q7Z6B0-2|CCDC91', 'ENST00000535520.5_1_12:28412355-28702103:+|nuORF', 'ENSG00000123106|ENST00000536442|CCDC91', 'ENST00000540401.5_1_12:28421609-28702103:+|nuORF'] 48679 7900 KELQAEQEDRA True H1975_Epitope_Rep1 1315.63680756615 1315.6357099358602 35.339 2 -1.2034092722799148 0.3623792526770337 1.0 ['ENSG00000115677|ENST00000310931|HDLBP', 'nc|ENSG00000115677|Q00341-2|HDLBP', 'ENST00000487169.5_1_2:242169444-242174670:-|nuORF'] 2089 6974 AELMQALWR True NCI_RA007_Epitope_Rep1 1116.5749996870798 1116.57390993586 31.13 2 -1.203414394354297 0.3623792526770337 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 13931 9088 DRFFWNKYMIQ True NCI_RA007_Epitope_Rep2 1546.73910489006 1546.7380099358602 39.954 2 -1.2034480873748201 0.36238051264132576 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-2|INPP5F'] 56257 7450 LDQEKVSSVFY True NCI_RA007_Epitope_Rep1 1313.6503323719699 1313.6492299358601 32.976 2 -1.203450055503907 0.36238051264132576 1.0 ['ENSG00000196341|ENST00000641015|OR8D1'] 43715 17706 IIRKRSIFHQ True PC9_epitope_Rep1 1296.77787335728 1296.77623490379 72.902 3 -1.2034531474907342 0.36238051264132576 1.0 ['ENST00000532395.5_1_17:72947667-72950470:-|nuORF', 'nc|ENSG00000167861|Q8IV36-3|HID1', 'nc|ENSG00000167861|Q8IV36-2|HID1', 'ENSG00000167861|ENST00000425042|HID1'] 14314 14856 DTDGKKQQQKD True H1975_Epitope_Rep3 1289.62115750201 1289.62006993586 62.526 2 -1.2034688825203852 0.36238051264132576 1.0 ['RPL3L|p.L146Q|1|0.55|ENSG00000140986|chr16:1950908-1950908|A/T|missense_variant'] 137966 6529 YPYHFQKHFFF True H1975_Epitope_Rep1 1559.7350054857895 1559.73334490379 30.171 3 -1.2034791515212868 0.36238051264132576 1.0 ['ENSG00000149516|ENST00000278865|MS4A3'] 46160 9969 ITDAKKREA True PC9_epitope_Rep1 1030.5771078620598 1030.5760099358602 43.21 2 -1.2034992296889135 0.36238051264132576 1.0 ['nc|ENSG00000183955|Q9NQR1|KMT5A', 'ENST00000437519.5_1_12:123868737-123892247:+|nuORF', 'ENSG00000183955|ENST00000402868|KMT5A', 'ENST00000413684.1_1_2:91935968-91936997:-|nuORF'] 20629 11622 EQFEEKKKRAK True H1975_Epitope_Rep3 1419.78341223019 1419.7823099358602 49.837 2 -1.20350069142577 0.36238051264132576 1.0 ['nc|ENSG00000173421|Q8IYA8-3|IHO1', 'ENSG00000173421|ENST00000452691|IHO1'] 88722 10840 RCWTIWKYMKD True NCI_RA007_Epitope_Rep1 1528.7319113346396 1528.7308099358602 46.159 2 -1.2035303287592747 0.36238051264132576 1.0 ['MOGAT2|p.H110Mfs*30|1|0.3|ENSG00000166391|chr11:75727488-75727488|C/-|frameshift_variant', 'nc|ENSG00000166391|Q3SYC2-3|MOGAT2', 'ENSG00000166391|ENST00000198801|MOGAT2'] 7688 5702 ASPPEGPQSY True H1975_Epitope_Rep3 1031.45598966987 1031.4554749679298 26.964 1 -1.2036147540007869 0.36238846945778996 1.0 ['nc|ENSG00000160685|O15156-2|ZBTB7B', 'ENSG00000160685|ENST00000535420|ZBTB7B'] 125038 6836 VLPEYLDRN True NCI_RA007_Epitope_Rep1 1117.5767735088898 1117.57566993586 30.596 2 -1.2036327048715563 0.36240438249497736 1.0 ['ENSG00000159459|ENST00000290650|UBR1', 'UBR1-TGM5|1|fusion', 'nc|ENSG00000159459|Q8IWV7-2|UBR1', 'UBR1-TGM5|2|fusion', 'UBR1-TGM5|3|fusion'] 108074 14154 TDLETRSYKYL True H1975_Epitope_Rep1 1387.6983451935498 1387.69724993586 59.617 2 -1.2036751755383028 0.36240438249497736 1.0 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'NF1|p.H1943Rfs*17|3|0.12|ENSG00000196712|chr17:31334853-31334863|ACCTTTGTTTG/-|frameshift_variant', 'NF1|p.R1970Sfs*6|1|0.43|ENSG00000196712|chr17:31334931-31334932|AA/-|frameshift_variant', 'NF1|p.T2108Nfs*12|1|0.16|ENSG00000196712|chr17:31336808-31336809|-/A|frameshift_variant', 'NF1|p.G1807Afs*56|1|0.52|ENSG00000196712|chr17:31327648-31327648|G/-|frameshift_variant', 'nc|ENSG00000196712|P21359-3|NF1', 'NF1|p.I679Dfs*21|1|0.39|ENSG00000196712|chr17:31226459-31226460|-/C|frameshift_variant', 'ENST00000495910.6_1_17:29490228-29576996:+|nuORF', 'NF1|p.R1250Lfs*10|1|0.15|ENSG00000196712|chr17:31235648-31235658|CTCGGCATTTA/-|frameshift_variant', 'nc|ENSG00000196712|P21359-4|NF1', 'nc|ENSG00000196712|P21359-5|NF1'] 32456 15451 GGHGRCSP True NCI_RA007_Epitope_Rep3 769.32895576529 769.32784993586 68.333 2 -1.203686763783112 0.36242481719034664 1.0 ['ENST00000358187.2_1_10:106075300-106075366:-|nuORF'] 98738 19212 SIRRWAYQMFR True PC9_epitope_Rep2 1512.7772217342797 1512.7761299358601 79.272 2 -1.2037651796659123 0.3624544592503868 1.0 ['ACACB|p.E285Q|1|0.24|ENSG00000076555|chr12:109167962-109167962|G/C|missense_variant'] 54848 10470 LAGASPTP True H1975_Epitope_Rep1 712.3755545212 712.3750049679301 45.229 1 -1.2038419423749922 0.3624544592503868 1.0 ['ENST00000436881.2_1_9:139742177-139742615:+|nuORF'] 16090 12945 EEDPDRKRKKK True H1975_Epitope_Rep3 1427.7844748593495 1427.78336993586 55.023 2 -1.2038613978032195 0.3624544592503868 1.0 ['nc|ENSG00000156603|A0JLT2|MED19'] 126527 9252 VPNRVLAP True PC9_epitope_Rep6 864.5181364339599 864.51702993586 45.739 2 -1.2038625204732443 0.3624544592503868 1.0 ['ENSG00000189252|ENST00000370503|SPANXN3'] 131532 23929 VVVGVGLIVG True NCI_RA007_Epitope_Rep4 910.5851533646199 910.5846049679301 103.77 1 -1.2038748694019226 0.3624544592503868 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 62387 10795 LLRRLWWEDCW True NCI_RA007_Epitope_Rep4 1574.7816384083796 1574.78054993586 48.371 2 -1.2038836413675449 0.3624544592503868 1.0 ['AluJr4_dup4313|chr3:128811130-128811275:-|1.1423359140543188|0.0007489705087858|10.57|502.0|1|1|sense'] 64893 20547 LSASRHWQEL True PC9_epitope_Rep1 1225.62036965637 1225.61926993586 83.846 2 -1.203890587273078 0.3624544592503868 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'ENST00000473037.5_1_1:235826242-235897989:-|nuORF'] 56744 6836 LEALVEDIDR True H1975_Epitope_Rep1 1171.6084675599898 1171.60736993586 31.339 2 -1.2038981493520005 0.3624544592503868 1.0 ['nc|ENSG00000186462|Q9ULW6-2|NAP1L2', 'ENSG00000186462|ENST00000373517|NAP1L2'] 63265 20316 LPALSKDKEEE True PC9_epitope_Rep3 1257.64524699153 1257.64360490379 83.393 3 -1.203919799369076 0.3624544592503868 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'ENST00000374089.5_1_1:27426800-27429818:-|nuORF'] 42762 7731 IFFPSFFLP True H1975_Epitope_Rep1 1113.5899043918898 1113.5888099358601 34.698 2 -1.2039528963806518 0.3624544592503868 1.0 ['ENST00000602725.5_1_1:32373878-32374037:-|nuORF'] 128731 4518 VSPPTHGR True NCI_RA007_Epitope_Rep5 849.44569976969 849.44460993586 24.031 2 -1.2039605358916654 0.3624624137543825 1.0 ['nc|ENSG00000101901|Q9NP73-4|ALG13', 'nc|ENSG00000101901|Q9NP73-3|ALG13', 'ENSG00000101901|ENST00000394780|ALG13'] 128717 2758 VSPGPPVLWA True H1975_Epitope_Rep2 1021.5596668927699 1021.55856993586 14.637 2 -1.2039827882357756 0.36247832216690995 1.0 ['ENST00000343916.7_1_20:61461923-61467875:+|nuORF', 'ENST00000469802.5_1_20:61464351-61467803:+|nuORF', 'ENST00000462700.5_1_20:61464351-61470045:+|nuORF'] 81130 11220 PPHWVLGPV True PC9_epitope_Rep5 1000.5494365622399 1000.54832993586 48.147 2 -1.2039907776784826 0.36247832216690995 1.0 ['ENST00000472378.1_1_22:43555244-43555427:+|nuORF', 'ENSG00000100300|ENST00000337554|TSPO'] 22211 4598 ETDHSNDKRSW True H1975_Epitope_Rep3 1373.59600538333 1373.5949099358602 22.808 2 -1.204128665876347 0.36253165820368544 1.0 ['ENST00000437198.6_1_16:14529576-14529846:-|nuORF'] 133079 16255 WADRTARVI True PC9_epitope_Rep4 1086.59342663254 1086.59232993586 70.476 2 -1.204153234039317 0.36253165820368544 1.0 ['nc|ENSG00000146166|Q5TDP6-2|LGSN', 'ENSG00000146166|ENST00000370657|LGSN'] 46479 11642 ITNWMELCF True PC9_epitope_Rep3 1155.50928819603 1155.50764490379 49.796 3 -1.2042116246603016 0.36253961124834694 1.0 ['ENST00000216225.8_1_22:41368518-41368620:+|nuORF'] 109227 12598 TFVDVGVVAAS True PC9_epitope_Rep4 1063.5549754351498 1063.5538699358601 56.291 2 -1.204298530436951 0.3625589460814891 1.0 ['ENSG00000255582|ENST00000542433|OR10G2'] 37702 4260 HANEELDE True PC9_epitope_Rep3 955.38830403287 955.38720993586 21.5 2 -1.204300171859382 0.3625589460814891 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1'] 129029 12635 VTAELPGD True NCI_RA007_Epitope_Rep5 800.3915985081599 800.39105496793 55.253 1 -1.204328097800353 0.3625589460814891 1.0 ['nc|ENSG00000162367|P17542-2|TAL1', 'ENSG00000162367|ENST00000691006|TAL1'] 85536 23045 QLKVIIDSSR True PC9_epitope_Rep5 1157.67682190333 1157.67572993586 93.633 2 -1.2043368871885056 0.3625589460814891 1.0 ['ENSG00000077063|ENST00000160373|CTTNBP2', 'CTTNBP2|p.P659Lfs*10|1|0.27|ENSG00000077063|chr7:117791220-117791220|G/-|frameshift_variant'] 39293 15804 HLQDLFAPL True PC9_epitope_Rep4 1052.5654805492 1052.5643899358602 68.714 2 -1.2043886286204524 0.3625748502994012 1.0 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS', 'nc|ENSG00000163618|Q9ULU8-2|CADPS', 'nc|ENSG00000163618|Q9ULU8-3|CADPS', 'ENST00000463002.2_1_3:62463934-62477992:-|nuORF'] 137676 21766 YMFILQAVLLL True H1975_Epitope_Rep2 1322.7672171308598 1322.7655649037902 90.033 3 -1.2044079996985209 0.3625748502994012 1.0 ['OR52K2|p.I221M|1|0.43|ENSG00000181963|chr11:4450002-4450002|C/G|missense_variant'] 37051 11926 GVSEERIHL True PC9_epitope_Rep4 1038.5458077337798 1038.54470993586 53.658 2 -1.2045919619787797 0.36261570320101794 1.0 ['nc|ENSG00000149636|Q9H410-4|DSN1', 'ENSG00000149636|ENST00000373750|DSN1'] 23512 3895 EWLNKHSMQNR True H1975_Epitope_Rep3 1441.6884662995299 1441.68736993586 20.103 2 -1.2046456824310525 0.36261570320101794 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 105692 5215 SVGTEMII True PC9_epitope_Rep5 848.43135514516 848.43024993586 25.077 2 -1.204671932918327 0.36263612888739194 1.0 ['nc|ENSG00000149922|O95947-2|TBX6', 'ENSG00000149922|ENST00000395224|TBX6'] 114547 7511 TSILDNLLLR True NCI_RA007_Epitope_Rep5 1156.6815729306 1156.6804699358602 35.574 2 -1.204699021897824 0.3626645044595522 1.0 ['nc|ENSG00000159899|P20594-2|NPR2', 'ENSG00000159899|ENST00000342694|NPR2'] 22365 9669 ETERECRGL True H1975_Epitope_Rep2 1091.5029569456299 1091.50184993586 42.173 2 -1.2047009407543798 0.3626645044595522 1.0 ['ENST00000539759.5_1_11:47639025-47663996:-|nuORF'] 42854 24542 IFPAFCCG True NCI_RA007_Epitope_Rep5 856.3611674103599 856.36006993586 101.87 2 -1.2047231900788038 0.3626724546565876 1.0 ['L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|260|2|anti-sense', 'chr2:113477199-113482177|379|28.75|0.21|7.07|+|1|TE_info:L1PA3,L1PA3_dup1127,L1,LINE,donor,-,113471482,113477199|None,ZNG1B|58'] 45894 7192 ISREEREQNLL True NCI_RA007_Epitope_Rep2 1385.7262912768897 1385.72518993586 32.595 2 -1.2047522390715202 0.3626883544556431 1.0 ['nc|ENSG00000019485|Q9NQV5-2|PRDM11', 'nc|ENSG00000019485|Q9NQV5|PRDM11', 'ENSG00000019485|ENST00000683152|PRDM11'] 76444 10863 NSYSADVK True PC9_epitope_Rep1 882.4083112014599 882.40720993586 46.671 2 -1.2047677990187575 0.3626883544556431 1.0 ['ENST00000534843.1_1_12:12982539-12982698:+|nuORF'] 122973 17262 VGWQLKNLVKK True PC9_epitope_Rep6 1311.8026911227896 1311.80104490379 78.997 3 -1.2048038509161785 0.36269630405767816 1.0 ['nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENSG00000153721|ENST00000607772|CNKSR3', 'ENST00000433165.6_1_6:154727490-154754936:-|nuORF'] 101695 4305 SPGAQYPPV True PC9_epitope_Rep6 914.4497820906198 914.44868993586 23.598 2 -1.2049015555879579 0.36271672695522017 1.0 ['ENST00000358393.1_2_20:62669539-62670381:+|nuORF'] 134261 8108 WRRRRRHQRSQ True NCI_RA007_Epitope_Rep1 1620.90463904844 1620.9035499358602 35.537 2 -1.204989818496247 0.3627441199211833 1.0 ['ENST00000439096.2_1_19:47734314-47734437:-|nuORF'] 112622 9128 TPDSIDKD True PC9_epitope_Rep4 889.4028914678499 889.40234496793 42.697 1 -1.204998953297287 0.3627441199211833 1.0 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A'] 27803 5039 FQERNREHERH True NCI_RA007_Epitope_Rep2 1536.7294195947197 1536.72778490379 24.225 3 -1.2050147657316286 0.3627441199211833 1.0 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7', 'ENST00000537641.5_1_11:61178417-61183276:-|nuORF'] 131429 17148 VVTPPLPA True PC9_epitope_Rep4 792.47454028648 792.47344993586 73.966 2 -1.2050914967393793 0.3627441199211833 1.0 ['ENST00000432329.6_1_2:208467595-208467667:+|nuORF'] 99460 12656 SLELELGLVPE True NCI_RA007_Epitope_Rep1 1197.64926974281 1197.64816993586 53.211 2 -1.2050917048638192 0.3627441199211833 1.0 ['nc|ENSG00000170581|P52630-4|STAT2', 'ENSG00000170581|ENST00000314128|STAT2', 'ENST00000556539.5_1_12:56737175-56743495:-|nuORF'] 133325 9047 WERSKPSAP True PC9_epitope_Rep2 1056.5352430500798 1056.5341499358601 40.147 2 -1.2050926795741548 0.3627441199211833 1.0 ['ENST00000456414.2_1_1:117036239-117036707:-|nuORF'] 26440 12243 FILVLNEKK True PC9_epitope_Rep1 1102.67503099818 1102.67392993586 51.952 2 -1.2050995316860005 0.3627441199211833 1.0 ['ENST00000509268.1_1_5:82400738-82554497:+|nuORF', 'nc|ENSG00000152422|Q13426-3|XRCC4', 'ENST00000542685.5_1_5:82400738-82606644:+|nuORF', 'ENSG00000152422|ENST00000396027|XRCC4', 'nc|ENSG00000152422|Q13426|XRCC4'] 128549 12848 VSHLWFDNH True PC9_epitope_Rep3 1153.53049202281 1153.52884490379 54.439 3 -1.2051080090946564 0.3627441199211833 1.0 ['ENSG00000105675|ENST00000262623|ATP4A'] 26962 7284 FLIWWHWYNHT True H1975_Epitope_Rep1 1601.75680355953 1601.7551549037898 33.029 3 -1.2051357336855288 0.3627441199211833 1.0 ['ENST00000304661.5_1_X:119759908-119760061:-|nuORF'] 55922 15183 LDGTEINGRN True PC9_epitope_Rep3 1087.52580056519 1087.52470993586 63.546 2 -1.2051412083470534 0.3627441199211833 1.0 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6', 'ENST00000414124.1_1_17:16520269-16520722:-|nuORF'] 68483 22846 LTVFWMDFV True PC9_epitope_Rep5 1156.56270366788 1156.5616099358601 92.872 2 -1.2051782992996125 0.3627441199211833 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 73672 19434 NGNGHEHC True NCI_RA007_Epitope_Rep4 866.3089485967 866.30784993586 84.019 2 -1.2051869500626546 0.3627441199211833 1.0 ['NMT1-NME1|1|fusion', 'ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'NMT1|p.L84Ffs*50|1|0.27|ENSG00000136448|chr17:45086515-45086516|-/TT|frameshift_variant', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 859 7186 ADILDKVIER True PC9_epitope_Rep4 1170.66083748602 1170.65920490379 34.943 3 -1.2052207225182976 0.3627441199211833 1.0 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 54692 11218 LAEELRTSL True PC9_epitope_Rep3 1030.56587447202 1030.56476993586 48.159 2 -1.2052283298574145 0.3627441199211833 1.0 ['ENSG00000173805|ENST00000347901|HAP1', 'nc|ENSG00000173805|P54257|HAP1', 'nc|ENSG00000173805|P54257-3|HAP1', 'nc|ENSG00000173805|P54257-4|HAP1'] 99228 7979 SLCLAWAYLL True PC9_epitope_Rep2 1151.6049028330299 1151.6032649037902 36.054 3 -1.2052427555739937 0.3627441199211833 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'nc|ENSG00000169247|Q8TF17-4|SH3TC2', 'ENST00000504517.5_1_5:148386573-148411207:-|nuORF'] 3011 8731 AFQHMQHF True PC9_epitope_Rep1 1044.4599699348398 1044.45886993586 38.42 2 -1.2052486100607789 0.3627441199211833 1.0 ['ENSG00000198793|ENST00000361445|MTOR', 'ENST00000495435.1_1_1:11193031-11204809:-|nuORF'] 18405 11545 EKEALKQEVM-[Oxidation] True H1975_Epitope_Rep3 1219.6118390687097 1219.6107499358602 49.536 2 -1.2053349099975508 0.3627600139671771 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN', 'nc|ENSG00000100503|Q8N4C6-6|NIN', 'nc|ENSG00000100503|Q8N4C6-11|NIN', 'nc|ENSG00000100503|Q8N4C6-4|NIN', 'nc|ENSG00000100503|Q8N4C6-9|NIN', 'nc|ENSG00000100503|Q8N4C6-2|NIN', 'nc|ENSG00000100503|Q8N4C6|NIN', 'nc|ENSG00000100503|Q8N4C6-10|NIN', 'ENSG00000100503|ENST00000530997|NIN'] 120720 7718 VGASIKIAP True PC9_epitope_Rep1 854.5225531080599 854.52144993586 34.506 2 -1.2053450095991924 0.3627600139671771 1.0 ['ENST00000550858.1_1_12:42681476-42682067:+|nuORF'] 25701 5918 FFGCFTEKHI True PC9_epitope_Rep5 1227.57466533391 1227.57301490379 27.756 3 -1.205396633706338 0.3627634368375109 1.0 ['ENSG00000247746|ENST00000500968|USP51'] 98453 19905 SIKEVIQP True PC9_epitope_Rep1 912.5280324113198 912.52692993586 81.382 2 -1.2054352110102649 0.3627634368375109 1.0 ['HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4'] 64659 24576 LRILLVLKPI True H1975_Epitope_Rep3 1176.83220034592 1176.83056490379 102.27 3 -1.2054667126223688 0.3627838535496502 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 64658 24871 LRILLVLKPI True H1975_Epitope_Rep2 1176.83220034592 1176.83056490379 102.23 3 -1.2055277142730503 0.3627997456137069 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 123013 11606 VGYAVHDNWI True PC9_epitope_Rep1 1172.5614577979197 1172.55982490379 49.521 3 -1.2055302733915176 0.3627997456137069 1.0 ['ENSG00000157184|ENST00000371486|CPT2'] 63695 7417 LPQDEGAWP True PC9_epitope_Rep5 1011.4661604307499 1011.46506993586 33.485 2 -1.2055644737454785 0.36280769134847995 1.0 ['ENSG00000105559|ENST00000263265|PLEKHA4'] 108404 15964 TEEAVYCFY True H1975_Epitope_Rep2 1123.4532127885498 1123.45210993586 66.604 2 -1.205596192715724 0.3628156368850926 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 64661 23584 LRILLVLKPI True NCI_RA007_Epitope_Rep4 1176.83220034592 1176.83056490379 102.31 3 -1.2056601689124171 0.3628190580695038 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 64660 23618 LRILLVLKPI True NCI_RA007_Epitope_Rep3 1176.83220034592 1176.83056490379 102.43 3 -1.205711265265844 0.3628190580695038 1.0 ['ENST00000221200.8_1_8:25290848-25290881:-|nuORF'] 124031 26508 VKMMKLHL True PC9_epitope_Rep5 998.5769142633799 998.57580993586 107.94 2 -1.2057693778263128 0.36282700316716127 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 125111 9715 VLPGVDRLP True H1975_Epitope_Rep1 964.5705659296399 964.56946993586 42.296 2 -1.2058527814799131 0.36283494806668415 1.0 ['PATZ1|p.Y509Ffs*13|1|0.29|ENSG00000100105|chr22:31328911-31328912|-/CAGAGGAGAAACCTAAACAAGACAAAAAGGAC|frameshift_variant', 'nc|ENSG00000100105|Q9HBE1-4|PATZ1', 'nc|ENSG00000100105|Q9HBE1-2|PATZ1', 'nc|ENSG00000100105|Q9HBE1-3|PATZ1', 'ENSG00000100105|ENST00000266269|PATZ1'] 66166 6789 LSPEPPKTK True H1975_Epitope_Rep3 995.5651461960299 995.56404993586 31.069 2 -1.2059542914064325 0.36285536159600995 1.0 ['FAM47A|p.E395K|1|0.13|ENSG00000185448|chrX:34131096-34131096|C/T|missense_variant'] 67582 9577 LTESPSPDP True H1975_Epitope_Rep3 941.43419159613 941.43364496793 41.849 1 -1.2059701338224966 0.36286330594381616 1.0 ['ENST00000270645.7_1_19:50046533-50046872:+|nuORF'] 87259 8340 QSRQDVLEKYY True H1975_Epitope_Rep1 1427.70449320315 1427.70338993586 37.011 2 -1.2060305898740042 0.362874669592539 1.0 ['ENSG00000172817|ENST00000310193|CYP7B1'] 85942 20940 QPALVLAQVP True PC9_epitope_Rep2 1034.6124307416198 1034.61132993586 85.993 2 -1.2060448224319413 0.362874669592539 1.0 ['ENSG00000004779|ENST00000007516|NDUFAB1'] 119955 16447 VEYNGCRKAF True PC9_epitope_Rep2 1185.5600778989299 1185.5589899358602 68.504 2 -1.2060728210829401 0.362874669592539 1.0 ['ENSG00000147117|ENST00000377073|ZNF157'] 133870 3155 WMKGVGWL True PC9_epitope_Rep3 975.5000438416698 975.49894993586 17.136 2 -1.2061117720302321 0.36288261330341 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 120482 17371 VFVMTILII True NCI_RA007_Epitope_Rep3 1047.6402257125899 1047.6391299358602 76.23 2 -1.2061491581246744 0.3629030247113682 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 14759 19529 DVWRKKYMRWM True NCI_RA007_Epitope_Rep2 1597.8009939539697 1597.7998899358602 80.903 2 -1.2062494205857723 0.3629133789561597 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENST00000497964.1_1_1:39924789-39929409:+|nuORF', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 120011 13341 VFDEADRIL True PC9_epitope_Rep3 1076.5502244078798 1076.54912993586 56.35 2 -1.2062666899761103 0.3629133789561597 1.0 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 28298 2846 FRYKDFLYFLT True H1975_Epitope_Rep1 1511.7812869718696 1511.77963490379 14.578 3 -1.2062973438346556 0.3629133789561597 1.0 ['ENSG00000186526|ENST00000612078|CYP4F8'] 120614 17899 VGAGLGES True H1975_Epitope_Rep1 688.33916901248 688.3386249679301 74.543 1 -1.2062987018722295 0.3629133789561597 1.0 ['ENST00000490689.3_1_3:157815429-157815600:-|nuORF'] 91036 20886 RLKTEKEK True PC9_epitope_Rep6 1030.61349337078 1030.6123899358602 93.111 2 -1.2063030266621741 0.3629133789561597 1.0 ['ENST00000379618.6_1_5:114515749-114515857:-|nuORF'] 83775 14154 QEEFLTYVE True PC9_epitope_Rep6 1156.5288202569598 1156.5277299358602 66.313 2 -1.2063069062099305 0.3629133789561597 1.0 ['ADAMTS6|p.L39V|1|0.06|ENSG00000049192|chr5:65471125-65471125|G/C|missense_variant'] 136296 21150 YGTAIIMYV True PC9_epitope_Rep4 1029.5205045027299 1029.51940993586 89.516 2 -1.2063088281589454 0.3629133789561597 1.0 ['ENSG00000221933|ENST00000641663|OR2A25', 'ENSG00000243896|ENST00000641841|OR2A7', 'ENSG00000180658|ENST00000315453|OR2A4'] 97432 24681 SGGGGGGGGD True PC9_epitope_Rep5 676.24124587636 676.24069496793 100.06 1 -1.2063150418942246 0.3629133789561597 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1'] 124716 1744 VLKKKKKKKK True NCI_RA007_Epitope_Rep2 1254.92274668582 1254.9211049037901 9.4961 3 -1.2063547639304468 0.3629133789561597 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 75088 1983 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 10.887 3 -1.2063667237083173 0.3629133789561597 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 13590 6255 DPRDAEDAI True PC9_epitope_Rep6 1000.4461532621599 1000.44504993586 32.556 2 -1.2063824998611696 0.3629133789561597 1.0 ['ENSG00000111786|ENST00000229390|SRSF9'] 91178 9337 RLPTPEQI True PC9_epitope_Rep4 952.5341804209199 952.53308993586 43.523 2 -1.2063865346861906 0.3629133789561597 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 57061 7034 LEEIESQIQK True H1975_Epitope_Rep1 1215.63468230783 1215.63358993586 32.091 2 -1.2063890726680286 0.3629133789561597 1.0 ['nc|ENSG00000165794|Q9NP94-2|SLC39A2', 'ENSG00000165794|ENST00000298681|SLC39A2'] 127390 8302 VQQLWNTFWIL True H1975_Epitope_Rep3 1446.7659712609 1446.7648699358601 36.917 2 -1.2063923981200275 0.3629133789561597 1.0 ['ENST00000368173.7_1_1:158068274-158068373:+|nuORF'] 115514 6740 TVGLWRWCITI True H1975_Epitope_Rep1 1346.7169128934997 1346.71525490379 30.966 3 -1.2064278845336787 0.3629133789561597 1.0 ['CLDND1|p.R80W|1|0.27|ENSG00000080822|chr3:98521187-98521187|G/A|missense_variant'] 84987 6579 QIEAVLLNS True PC9_epitope_Rep2 985.54441075145 985.54330993586 30.719 2 -1.206478569515262 0.3629133789561597 1.0 ['GCN1L1-CCND2|1|fusion', 'ENSG00000118971|ENST00000261254|CCND2'] 112221 6411 TLWPLCHT True PC9_epitope_Rep2 969.47422301665 969.47312993586 30.069 2 -1.2064958026717167 0.3629133789561597 1.0 ['nc|ENSG00000170909|Q8IYS5-2|OSCAR', 'ENSG00000170909|ENST00000358375|OSCAR', 'nc|ENSG00000170909|Q8IYS5-3|OSCAR', 'nc|ENSG00000170909|Q8IYS5-5|OSCAR', 'nc|ENSG00000170909|Q8IYS5|OSCAR', 'nc|ENSG00000170909|Q8IYS5-7|OSCAR'] 133869 3208 WMKGVGWL True PC9_epitope_Rep1 975.5000438416698 975.49894993586 17.22 2 -1.2065134379982367 0.36291800132115215 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 88634 13089 RARLLPPSAP True PC9_epitope_Rep3 1076.6454622054 1076.6443699358601 55.37 2 -1.2065304699962762 0.36291800132115215 1.0 ['ENST00000602421.5_1_1:39547131-39549904:+|nuORF'] 122069 5710 VGRAPKQA True PC9_epitope_Rep3 825.48208527841 825.48098993586 27.037 2 -1.2065307535734175 0.36291800132115215 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 36742 8036 GVNSEPSLLPY True PC9_epitope_Rep3 1174.5870038394198 1174.58536490379 35.887 3 -1.2065377691484853 0.36291800132115215 1.0 ['ENSG00000075539|ENST00000358350|FRYL'] 81264 21377 PPPNWRRPVYE True H1975_Epitope_Rep3 1409.72041805081 1409.71932993586 89.324 2 -1.206557020945961 0.36291800132115215 1.0 ['ENST00000557163.1_1_14:61746812-61748042:-|nuORF', 'ENSG00000182107|ENST00000555868|TMEM30B'] 16859 14632 EFSQRFGVL True PC9_epitope_Rep5 1081.55564414149 1081.5545499358602 61.283 2 -1.206576496789941 0.36291800132115215 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'MYO7B|p.S1119*|1|0.51|ENSG00000169994|chr2:127620375-127620376|CG/-|frameshift_variant', 'MYO7B|p.K900Rfs*26|1|0.3|ENSG00000169994|chr2:127608762-127608762|A/-|frameshift_variant', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B'] 79864 7345 PIITAAAP True H1975_Epitope_Rep3 752.4432401582 752.44214993586 33.229 2 -1.2065782846255146 0.36291800132115215 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant', 'KMT2D|p.A3440Vfs*11|1|0.21|ENSG00000167548|chr12:49034848-49034848|G/-|frameshift_variant', 'KMT2D|p.Q3370Pfs*53|2|0.24|ENSG00000167548|chr12:49037247-49037248|-/G|frameshift_variant', 'KMT2D|p.V3089Wfs*30|1|0.39|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant', 'KMT2D|p.R3082Gfs*14|1|0.2|ENSG00000167548|chr12:49038108-49038112|TCCCG/-|frameshift_variant', 'KMT2D|p.R2687Qfs*4|1|0.4|ENSG00000167548|chr12:49039604-49039604|C/-|frameshift_variant', 'KMT2D|p.S2590Wfs*56|1|0.29|ENSG00000167548|chr12:49039976-49040001|GCTGCTGGGCCCCAGGGGGCTGCCCG/-|frameshift_variant', 'KMT2D|p.G2178Wfs*24|1|0.33|ENSG00000167548|chr12:49041238-49041239|-/A|frameshift_variant', 'KMT2D|p.P2302Qfs*20|2|0.26|ENSG00000167548|chr12:49040865-49040865|G/-|frameshift_variant', 'KMT2D|p.P2276Hfs*10|1|0.1|ENSG00000167548|chr12:49040943-49040943|G/-|frameshift_variant', 'KMT2D|p.Y2199Ifs*65|1|0.16|ENSG00000167548|chr12:49041176-49041176|G/-|frameshift_variant', 'KMT2D|p.A1770Cfs*18|1|0.32|ENSG00000167548|chr12:49043883-49043884|-/A|frameshift_variant', 'KMT2D|p.A1390Gfs*42|1|0.26|ENSG00000167548|chr12:49048032-49048033|-/C|frameshift_variant', 'KMT2D|p.K1350Rfs*5|1|0.25|ENSG00000167548|chr12:49048734-49048741|CTCCTCCT/-|frameshift_variant', 'KMT2D|p.G1235Vfs*95|1|0.3|ENSG00000167548|chr12:49049884-49049884|C/-|frameshift_variant', 'KMT2D|p.E1171Nfs*41|1|0.27|ENSG00000167548|chr12:49050078-49050078|G/-|frameshift_variant', 'KMT2D|p.D1156Pfs*27|1|0.43|ENSG00000167548|chr12:49050122-49050123|CC/-|frameshift_variant', 'KMT2D|p.P998Lfs*2|1|0.18|ENSG00000167548|chr12:49050595-49050595|G/-|frameshift_variant', 'KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant'] 37867 17566 HDWLLYIIHGF True PC9_epitope_Rep6 1412.72410644892 1412.72245490379 80.208 3 -1.2066013948198526 0.36291800132115215 1.0 ['FIG4|p.R244H|1|0.14|ENSG00000112367|chr6:109738409-109738409|G/A|missense_variant'] 139961 22881 YVIKTTKLK True PC9_epitope_Rep4 1092.6906810623198 1092.68958993586 96.229 2 -1.2066319373074212 0.36291800132115215 1.0 ['ENST00000474983.5_1_6:10529144-10530083:+|nuORF', 'GCNT2|p.K355Sfs*26|1|0.12|ENSG00000111846|chr6:10626460-10626460|A/-|frameshift_variant', 'ENSG00000111846|ENST00000495262|GCNT2'] 23256 9727 EVRKWFSDR True NCI_RA007_Epitope_Rep2 1221.6254550368099 1221.6243499358602 42.457 2 -1.2066760128856442 0.36291800132115215 1.0 ['ENSG00000174306|ENST00000683867|ZHX3', 'nc|ENSG00000174306|Q9H4I2-2|ZHX3'] 74550 20917 NLAKKLEEI True PC9_epitope_Rep5 1056.6179100448799 1056.6168099358601 85.512 2 -1.2067613084473088 0.3629384051648927 1.0 ['ENST00000603395.1_1_7:56671114-56671243:+|nuORF', 'ENSG00000243317|ENST00000507606|STMP1'] 48479 6241 KEEVFWRNYFY True NCI_RA007_Epitope_Rep5 1579.7459640923098 1579.74430490379 30.682 3 -1.206777810104791 0.36294634511123575 1.0 ['ENSG00000169895|ENST00000380155|SYAP1'] 37830 8578 HDIAQQAFK True PC9_epitope_Rep4 1056.53524305008 1056.5341499358601 40.475 2 -1.2067937096801575 0.36295428485966397 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A', 'EIF3A|p.Y174H|1|0.75|ENSG00000107581|chr10:119072911-119072911|A/G|missense_variant'] 67850 12738 LTIYSSRSLIG True H1975_Epitope_Rep1 1208.67648755016 1208.67538993586 54.056 2 -1.2068181120129284 0.36296222441018483 1.0 ['ENST00000401878.7_2_7:155573289-155573589:+|nuORF'] 73523 8091 NFGIWGDT True NCI_RA007_Epitope_Rep2 908.4028318981999 908.40172993586 36.105 2 -1.2069446926485028 0.3629815181764933 1.0 ['PAFAH1B2|p.G74W|1|0.27|ENSG00000168092|chr11:117161193-117161193|G/T|missense_variant'] 99842 8833 SLGYSGCSRQ True H1975_Epitope_Rep1 1056.46584316092 1056.46474993586 38.898 2 -1.2069487150518727 0.3629815181764933 1.0 ['nc|ENSG00000292357|P15509-6|CSF2RA', 'nc|ENSG00000292357|P15509-3|CSF2RA'] 44015 15114 ILKCDAERI True PC9_epitope_Rep6 1059.57466533391 1059.5735699358602 70.195 2 -1.2069883130466692 0.3629815181764933 1.0 ['ENSG00000031698|ENST00000234677|SARS1'] 46051 14352 ISWGQGHFWE True PC9_epitope_Rep2 1245.55670677065 1245.5550749037902 60.466 3 -1.2070353173981352 0.3629815181764933 1.0 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6'] 36913 5084 GVQTPREDWAP True PC9_epitope_Rep5 1254.5992998586198 1254.59764490379 24.582 3 -1.207070569589892 0.3629838247389278 1.0 ['ENSG00000171456|ENST00000375687|ASXL1'] 76845 17669 NVHLLVLFSD True NCI_RA007_Epitope_Rep5 1155.62880908175 1155.6271649037901 74.745 3 -1.2071001752791435 0.3629838247389278 1.0 ['ENST00000396950.3_1_11:4703114-4703567:-|nuORF'] 64720 12357 [Acetylation]-LRPC[Carbamidomethyl]CGGPVT True H1975_Epitope_Rep2 1100.5106857740898 1100.51017496793 52.616 1 -1.2071306216129976 0.3629838247389278 1.0 ['ENST00000285124.12_1_18:9547789-9562973:-|nuORF'] 12817 16808 DLKHWKPV True PC9_epitope_Rep1 1021.5709002828098 1021.56980993586 69.477 2 -1.2071588861108256 0.3629838247389278 1.0 ['nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 13785 14194 DQSAYVSAI True PC9_epitope_Rep3 952.4501760134399 952.44906993586 59.682 2 -1.2071601017212488 0.3629838247389278 1.0 ['ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'nc|ENSG00000290798|Q9H1B4-5|NXF5', 'nc|ENSG00000290798|Q9H1B4-4|NXF5', 'nc|ENSG00000290798|Q9H1B4-6|NXF5', 'nc|ENSG00000290798|Q9H1B4-2|NXF5', 'nc|ENSG00000290798|Q9H1B4|NXF5'] 53286 14196 KTKGAGGG True NCI_RA007_Epitope_Rep1 674.3711378470998 674.3705849679301 59.255 1 -1.2072252944738076 0.36300422445698904 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 56101 14483 LDLNGNNITR True PC9_epitope_Rep4 1128.58873517492 1128.5876299358601 63.619 2 -1.2073369270526548 0.3630370850363872 1.0 ['SLIT2|p.N183Tfs*60|1|0.21|ENSG00000145147|chr4:20486207-20486207|A/-|frameshift_variant', 'ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2', 'SLIT2|p.A421Pfs*21|1|0.12|ENSG00000145147|chr4:20523888-20523888|G/-|frameshift_variant'] 112450 24903 TNPSIKKRPL True NCI_RA007_Epitope_Rep5 1152.69789170108 1152.6967899358601 103.28 2 -1.2073771360659102 0.36305748358234996 1.0 ['chr1:155637492-155763312|290|12.91|0.78|4.05|-|2|TE_info:LTR12F,LTR12F_dup22,ERV1,LTR,acceptor,-,155637452,155637492|None,GON4L|1'] 56104 7024 LDLNSVLGK True NCI_RA007_Epitope_Rep4 957.5494961318899 957.54838993586 33.644 2 -1.20741137888907 0.3630858182452555 1.0 ['ENSG00000106305|ENST00000223029|AIMP2'] 5284 8846 ALRNRKGQVP True H1975_Epitope_Rep3 1137.6730739355698 1137.67196993586 39.032 2 -1.2074345037188563 0.3630858182452555 1.0 ['ENSG00000105270|ENST00000360535|CLIP3'] 63007 10502 LNGHRRRLT True H1975_Epitope_Rep3 1121.6530071973298 1121.6519099358602 45.46 2 -1.2074655468100288 0.36309375467278077 1.0 ['ENSG00000196470|ENST00000394725|SIAH1', 'nc|ENSG00000196470|Q8IUQ4-2|SIAH1'] 75089 2044 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 11.224 3 -1.207506940405184 0.363097166496374 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 100303 23474 SLLVPLTPF True PC9_epitope_Rep3 985.58481901145 985.58427496793 95.572 1 -1.2075153669385386 0.363097166496374 1.0 ['ENST00000401528.5_1_7:100881309-100881411:-|nuORF'] 35858 6744 GVAAPFPK True PC9_epitope_Rep4 785.44357451137 785.44246993586 33.134 2 -1.2075811782244807 0.36311644945052207 1.0 ['ENSG00000128564|ENST00000249330|VGF'] 75281 8292 NPRRWWRWCWQ True H1975_Epitope_Rep3 1672.7946031339197 1672.7935099358601 36.879 2 -1.2076588104055839 0.36311644945052207 1.0 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 15927 10063 EDSDLIYKLY True H1975_Epitope_Rep1 1257.6128842340902 1257.61178993586 43.648 2 -1.207673986045192 0.36311644945052207 1.0 ['ENSG00000171492|ENST00000337338|LRRC8D'] 22650 9498 ETRVWEGP True PC9_epitope_Rep3 972.4664947839198 972.46538993586 41.483 2 -1.2077254748023096 0.36311644945052207 1.0 ['ENST00000397292.7_1_9:26947272-26947455:-|nuORF'] 78945 13038 PFFWLFEEREK True NCI_RA007_Epitope_Rep2 1526.7558005000199 1526.75470993586 55.342 2 -1.207750834350895 0.3631243848041964 1.0 ['ENST00000478866.5_1_1:161172175-161179984:+|nuORF', 'nc|ENSG00000158864|O75306-2|NDUFS2', 'ENSG00000158864|ENST00000676972|NDUFS2', 'ENST00000483804.5_1_1:161179060-161183980:+|nuORF'] 13361 5560 DNDGSTALSIA True PC9_epitope_Rep2 1062.4829326937 1062.48182993586 26.777 2 -1.2077697099011397 0.3631357304826693 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'nc|ENSG00000107104|Q14678-2|KANK1'] 111378 18409 TLISFIFIY True PC9_epitope_Rep6 1115.6266838234299 1115.62558993586 83.457 2 -1.2077829269880311 0.3631357304826693 1.0 ['nc|ENSG00000188687|Q9BY07-7|SLC4A5', 'nc|ENSG00000188687|Q9BY07-4|SLC4A5', 'nc|ENSG00000188687|Q9BY07-8|SLC4A5', 'ENST00000451608.2_1_2:74452054-74542150:-|nuORF', 'ENSG00000188687|ENST00000394019|SLC4A5', 'nc|ENSG00000188687|Q9BY07|SLC4A5', 'nc|ENSG00000188687|Q9BY07-2|SLC4A5', 'nc|ENSG00000188687|Q9BY07-6|SLC4A5', 'nc|ENSG00000188687|Q9BY07-5|SLC4A5', 'ENST00000483195.5_1_2:74452054-74512997:-|nuORF'] 43367 5917 IHNALKQTPK True NCI_RA007_Epitope_Rep5 1148.6665915728 1148.66494490379 29.445 3 -1.2077920616167903 0.3631357304826693 1.0 ['ARID5B|p.P1134Lfs*14|1|0.31|ENSG00000150347|chr10:62092863-62092872|CCGACAAATT/-|frameshift_variant', 'ENSG00000150347|ENST00000279873|ARID5B', 'nc|ENSG00000150347|Q14865-2|ARID5B'] 74259 12880 NIEHYGYLP True PC9_epitope_Rep5 1104.5240096600398 1104.52290993586 54.553 2 -1.2079110150863894 0.3631380268354367 1.0 ['COLGALT2|p.R286I|1|0.07|ENSG00000198756|chr1:183963996-183963996|C/A|missense_variant'] 73042 8623 NDISHRLR True H1975_Epitope_Rep3 1009.5417254128499 1009.54062993586 38.162 2 -1.2079143290006071 0.3631380268354367 1.0 ['ENSG00000187135|ENST00000335523|VSTM2B'] 125767 11160 VNIQAQAQSI True PC9_epitope_Rep6 1070.5720224816198 1070.57092993586 53.879 2 -1.2079232486913158 0.3631380268354367 1.0 ['ENSG00000170920|ENST00000305444|OR7G3'] 16505 6488 EENFLWMPAL True PC9_epitope_Rep5 1248.58489566444 1248.58378993586 29.928 2 -1.2079287851372917 0.3631380268354367 1.0 ['ENST00000360317.7_1_17:38073357-38073465:-|nuORF'] 112938 17347 TPRLRGGV True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 73.5 2 -1.2079475936862134 0.3631380268354367 1.0 ['ENST00000398665.7_1_19:2231997-2232204:+|nuORF'] 20055 10474 ENDSQNM[Oxidation]M[Oxidation]ES True H1975_Epitope_Rep2 1215.40198290555 1215.40088993586 45.305 2 -1.2080316661919976 0.3631584192953605 1.0 ['ENSG00000144824|ENST00000431670|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-2|PHLDB2', 'nc|ENSG00000144824|Q86SQ0-3|PHLDB2'] 32744 14210 GHYDARAR True NCI_RA007_Epitope_Rep5 944.45766143572 944.45656993586 61.349 2 -1.208094943783882 0.3631663531375749 1.0 ['ENST00000462171.1_1_1:20076843-20097914:-|nuORF', 'nc|ENSG00000162542|Q5TGY1-2|TMCO4', 'ENSG00000162542|ENST00000294543|TMCO4'] 83390 11071 QASQPTLHL True PC9_epitope_Rep5 993.5243440132099 993.52324993586 47.573 2 -1.208136145061692 0.3631686473827142 1.0 ['CILK1|p.P344T|1|0.06|ENSG00000112144|chr6:53013784-53013784|G/T|missense_variant'] 81789 6493 PSEVDDVKD True H1975_Epitope_Rep2 1002.4505699362599 1002.44946993586 29.891 2 -1.2081367943779628 0.3631686473827142 1.0 ['ENST00000490602.5_1_13:37598533-37607608:-|nuORF'] 61678 19796 LLHSFRMI True PC9_epitope_Rep2 1015.56370672739 1015.56260993586 81.535 2 -1.2081411502042476 0.3631686473827142 1.0 ['nc|ENSG00000004866|Q9NRC1-6|ST7'] 114496 24646 TSFLSMWLS True H1975_Epitope_Rep3 1070.5106680950198 1070.50956993586 102.54 2 -1.2081515705407506 0.3631686473827142 1.0 ['nc|ENSG00000158296|Q8WWT9-3|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-6|SLC13A3', 'ENSG00000158296|ENST00000279027|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-2|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-4|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-5|SLC13A3'] 81063 20953 PPCFPLCL True PC9_epitope_Rep6 888.42376766692 888.42266993586 93.385 2 -1.2082102879155026 0.3631686473827142 1.0 ['ENST00000491241.1_1_1:33476368-33477090:-|nuORF'] 120748 10508 VGAVQHVL True PC9_epitope_Rep1 821.47593726881 821.47484993586 45.309 2 -1.2082581724616914 0.36317658050451573 1.0 ['ENST00000451055.6_1_3:122632522-122634295:-|nuORF'] 55716 14731 LDDLLQRLHHN True NCI_RA007_Epitope_Rep2 1372.7211463268 1372.72004993586 61.972 2 -1.2082786420761247 0.36317998928709344 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 110134 13520 TICVDFFFF True PC9_epitope_Rep1 1137.5205045027299 1137.51886490379 56.861 3 -1.208335501241676 0.36317998928709344 1.0 ['ENST00000295951.7_1_3:57913451-57913754:+|nuORF'] 115777 22138 TVLTEEVF True PC9_epitope_Rep3 936.48041351256 936.47930993586 90.443 2 -1.2084108135689557 0.3631913303437967 1.0 ['nc|ENSG00000258659|Q9BYJ4-2|TRIM34', 'ENST00000491385.1_1_11:5653561-5662456:+|nuORF', 'ENSG00000258659|ENST00000429814|TRIM34'] 113445 8893 TQNVLVPPH True NCI_RA007_Epitope_Rep5 1003.5450794577898 1003.5439899358599 40.869 2 -1.2084237255787864 0.3631913303437967 1.0 ['ENSG00000131697|ENST00000378156|NPHP4', 'nc|ENSG00000131697|O75161-2|NPHP4'] 77609 14963 NYVAQLILD True PC9_epitope_Rep3 1047.5600608155898 1047.5589699358602 62.686 2 -1.2084451326913663 0.3631913303437967 1.0 ['ENSG00000018699|ENST00000317907|TTC27'] 123758 11456 VISCNGSGSPL True PC9_epitope_Rep1 1032.4909952796 1032.4898899358602 48.943 2 -1.2085224022165335 0.3631992625901521 1.0 ['NTRK3|p.T230S|1|0.34|ENSG00000140538|chr15:88136544-88136544|T/A|missense_variant'] 13363 6346 DNDGSTALSIA True PC9_epitope_Rep3 1062.4829326937 1062.48182993586 29.437 2 -1.208567133542601 0.36322305814359024 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'nc|ENSG00000107104|Q14678-2|KANK1'] 61986 4893 LLLPLLLR True NCI_RA007_Epitope_Rep1 949.66882341893 949.6682749679301 23.113 1 -1.2085899724437503 0.36322305814359024 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12', 'ENSG00000175489|ENST00000339007|LRRC25'] 11692 16423 DHERERFYIYR True NCI_RA007_Epitope_Rep2 1582.7640737679399 1582.7629699358602 68.609 2 -1.2085913432462734 0.36322305814359024 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 23354 23772 EVTLIDHSEEI True H1975_Epitope_Rep1 1283.6245115469499 1283.62340993586 98.678 2 -1.2086133513492032 0.3632309895995516 1.0 ['nc|ENSG00000171502|Q17RW2-2|COL24A1', 'ENSG00000171502|ENST00000370571|COL24A1'] 93441 11920 RSCWSSMCHEE True H1975_Epitope_Rep2 1353.49002638677 1353.4889299358601 50.93 2 -1.208655504229369 0.36323439660218965 1.0 ['ENST00000233099.5_1_2:37286102-37287764:-|nuORF'] 12910 8615 DLMRELGLSP True NCI_RA007_Epitope_Rep1 1129.58014463717 1129.5790499358602 37.511 2 -1.2086742199156502 0.36323439660218965 1.0 ['ENST00000515664.5_1_4:175158565-175177261:-|nuORF', 'nc|ENSG00000164117|Q9NRD0-2|FBXO8', 'ENSG00000164117|ENST00000393674|FBXO8'] 101920 9567 SPLLTFPSK True H1975_Epitope_Rep1 988.5593325396 988.55822993586 41.722 2 -1.2086924333718816 0.36324232762056596 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000484220.1_1_22:21119034-21147510:-|nuORF'] 20170 11899 ENQKLLQELK True H1975_Epitope_Rep3 1241.69795127073 1241.6968499358602 50.922 2 -1.2087031147545348 0.3632581890646407 1.0 ['ENSG00000165325|ENST00000298050|DEUP1'] 58291 10638 LETGSREVV True PC9_epitope_Rep1 988.5189242795999 988.51782993586 45.811 2 -1.2087305065616658 0.3632581890646407 1.0 ['nc|ENSG00000158104|P32754-2|HPD', 'nc|ENSG00000158104|P32754|HPD', 'ENSG00000158104|ENST00000289004|HPD', 'HPD|p.H60Q|1|0.2|ENSG00000158104|chr12:121857346-121857346|A/T|missense_variant', 'HPD|p.Q125Kfs*7|1|0.15|ENSG00000158104|chr12:121854744-121854744|G/-|frameshift_variant'] 125320 13718 VLRYSKEHRP True PC9_epitope_Rep3 1283.7098533671099 1283.7087499358602 57.848 2 -1.2087559962338676 0.36326159517760176 1.0 ['RUSC2|p.Q687H|1|0.05|ENSG00000198853|chr9:35555106-35555106|G/C|missense_variant'] 120810 8944 VGDFWRLVW True H1975_Epitope_Rep2 1176.6080140675197 1176.60637490379 39.363 3 -1.2087706857068492 0.36326159517760176 1.0 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'nc|ENSG00000080031|Q9HD43-3|PTPRH'] 67370 6550 LTDSLVC[Carbamidomethyl]K True NCI_RA007_Epitope_Rep2 934.47936824617 934.47826993586 30.09 2 -1.208784756209133 0.3632695253633567 1.0 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.C466Wfs*50|1|0.32|ENSG00000167658|chr19:3980014-3980015|CA/-|frameshift_variant', 'ENST00000594885.1_1_19:3984132-3985378:-|nuORF'] 96390 4692 SEHWKPELEE True NCI_RA007_Epitope_Rep2 1282.5829810881398 1282.58134490379 22.877 3 -1.2088448488776113 0.36327745535158296 1.0 ['nc|ENSG00000173230|Q14789-4|GOLGB1', 'nc|ENSG00000173230|Q14789-3|GOLGB1', 'nc|ENSG00000173230|Q14789|GOLGB1', 'ENSG00000173230|ENST00000614479|GOLGB1', 'nc|ENSG00000173230|Q14789-2|GOLGB1', 'GOLGB1|p.Q2744Pfs*8|1|0.18|ENSG00000173230|chr3:121691100-121691118|GCATGATCTCTACTATTTT/-|frameshift_variant'] 5398 17923 ALVPDELLK True H1975_Epitope_Rep1 996.5855472874399 996.58499496793 74.652 1 -1.208906340979994 0.3633102932934803 1.0 ['nc|ENSG00000086015|Q6P0Q8-2|MAST2', 'ENSG00000086015|ENST00000361297|MAST2'] 76867 11510 NVIGARRASWR True H1975_Epitope_Rep3 1284.7163357298798 1284.7152299358602 49.399 2 -1.208933190491203 0.36331369789655904 1.0 ['ENSG00000108953|ENST00000264335|YWHAE', 'nc|ENSG00000108953|P62258-2|YWHAE', 'ENST00000486241.1_1_17:1265194-1303470:-|nuORF', 'ENST00000489287.1_1_17:1268113-1303470:-|nuORF'] 130025 11044 VTPQKNSKL True PC9_epitope_Rep4 1013.5869442697699 1013.58584993586 50.256 2 -1.2089413486251352 0.36331369789655904 1.0 ['DCC|p.N1097K|1|0.33|ENSG00000187323|chr18:53450561-53450561|C/A|missense_variant'] 119846 5657 VEVPMELCHF True PC9_epitope_Rep5 1202.5464019807398 1202.54476490379 26.758 3 -1.2089879765095661 0.3633261941525128 1.0 ['ENST00000443945.6_1_13:47127426-47279607:+|nuORF', 'nc|ENSG00000136141|Q9Y2L9-2|LRCH1', 'nc|ENSG00000136141|Q9Y2L9|LRCH1', 'ENSG00000136141|ENST00000389797|LRCH1'] 110611 13649 TITHLLRTHL True NCI_RA007_Epitope_Rep1 1203.70879073795 1203.7076899358601 57.104 2 -1.209045644769785 0.3633261941525128 1.0 ['nc|ENSG00000012779|P09917-5|ALOX5', 'nc|ENSG00000012779|P09917-4|ALOX5', 'nc|ENSG00000012779|P09917-2|ALOX5', 'nc|ENSG00000012779|P09917-3|ALOX5', 'ENSG00000012779|ENST00000374391|ALOX5', 'ENST00000475300.1_1_10:45935943-45936950:+|nuORF'] 99535 15986 SLEVHLSTHTV True PC9_epitope_Rep1 1221.63535101417 1221.63424993586 66.299 2 -1.2090471632331423 0.3633261941525128 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384'] 58302 11404 LETKVVPETPK True H1975_Epitope_Rep3 1239.70745332527 1239.70634993586 48.981 2 -1.2090519085806675 0.3633261941525128 1.0 ['nc|ENSG00000165566|Q8N7J2-2|AMER2', 'ENSG00000165566|ENST00000515384|AMER2'] 136196 7627 YGLHPGNY True NCI_RA007_Epitope_Rep2 919.41881631551 919.41770993586 34.293 2 -1.2091452603180237 0.3633261941525128 1.0 ['ENSG00000181481|ENST00000328381|RNF135'] 56357 7095 LDRMQVQPRWY True H1975_Epitope_Rep1 1490.7452528996598 1490.7436049037901 32.319 3 -1.2091465719960064 0.3633261941525128 1.0 ['ENST00000411888.5_1_1:21329234-21415692:-|nuORF'] 136342 7348 YHCNQCGKAF True NCI_RA007_Epitope_Rep2 1169.4746340228096 1169.4735299358601 33.205 2 -1.2091494187220158 0.3633261941525128 1.0 ['nc|ENSG00000291239|Q3ZCX4-2|ZNF568', 'ENSG00000198453|ENST00000333987|ZNF568'] 102223 5045 SPSPTHPP True NCI_RA007_Epitope_Rep1 818.3922672145 818.39116993586 23.708 2 -1.2091536760097774 0.3633261941525128 1.0 ['nc|ENSG00000090534|P40225-3|THPO', 'nc|ENSG00000090534|P40225-2|THPO', 'ENSG00000090534|ENST00000647395|THPO'] 69646 7761 LVVRSLWPG True H1975_Epitope_Rep1 1025.6022004110898 1025.6011099358602 34.81 2 -1.209155609411388 0.3633261941525128 1.0 ['ENST00000254037.6_1_5:80597539-80597650:+|nuORF'] 133641 23848 WKLCLKKKK True NCI_RA007_Epitope_Rep3 1173.74200544253 1173.7403549037901 103.33 3 -1.209159729720165 0.3633261941525128 1.0 ['nc|ENSG00000134744|Q5TAX3-2|TUT4'] 85263 11184 QKQLQIIVK True NCI_RA007_Epitope_Rep4 1096.6968290719199 1096.69572993586 49.904 2 -1.2092679985931283 0.3633261941525128 1.0 ['ENSG00000138161|ENST00000392790|CUZD1', 'nc|ENSG00000138161|Q86UP6-2|CUZD1'] 119743 18708 VETLTIRR True NCI_RA007_Epitope_Rep1 986.58727862294 986.58618993586 76.91 2 -1.209302852748549 0.36334657385847163 1.0 ['ENSG00000137462|ENST00000642700|TLR2', 'TLR2|p.N414Tfs*2|1|0.56|ENSG00000137462|chr4:153704144-153704144|A/-|frameshift_variant'] 100623 7242 SLQPQHQSV True PC9_epitope_Rep1 1022.5145076055 1022.5134099358601 32.67 2 -1.2093876554038783 0.36337488015340363 1.0 ['ENSG00000168916|ENST00000513986|ZNF608', 'nc|ENSG00000168916|Q9ULD9-2|ZNF608', 'ZNF608|p.A1057S|1|0.18|ENSG00000168916|chr5:124647215-124647215|C/A|missense_variant'] 79933 11889 PIQLPHVRDC True NCI_RA007_Epitope_Rep5 1176.60736244452 1176.60571490379 52.387 3 -1.2094014900062393 0.36337488015340363 1.0 ['ENST00000270460.10_2_19:56190088-56190187:+|nuORF'] 78675 21173 PECCPGEM True H1975_Epitope_Rep3 864.2815967603199 864.28048993586 88.426 2 -1.2096246656116865 0.3634235625171203 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 70488 6018 LYSQYEEKLQE True H1975_Epitope_Rep1 1428.6772753958 1428.6756149037901 28.22 3 -1.2096540660817816 0.3634235625171203 1.0 ['nc|ENSG00000263155|P0CAP1-8|MYZAP', 'nc|ENSG00000263155|P0CAP1-5|MYZAP', 'nc|ENSG00000263155|P0CAP1-10|MYZAP', 'nc|ENSG00000263155|P0CAP1-7|MYZAP', 'nc|ENSG00000263155|P0CAP1-6|MYZAP', 'nc|ENSG00000263155|P0CAP1-9|MYZAP', 'nc|ENSG00000263155|P0CAP1-3|MYZAP', 'nc|ENSG00000263155|P0CAP1-4|MYZAP', 'nc|ENSG00000263155|P0CAP1-2|MYZAP', 'ENSG00000263155|ENST00000267853|MYZAP', 'nc|ENSG00000263155|P0CAP1-11|MYZAP'] 21890 5766 ESESEHHPSPD True NCI_RA007_Epitope_Rep2 1249.48472359885 1249.48362993586 27.045 2 -1.2096570622038303 0.3634235625171203 1.0 ['ENSG00000165120|ENST00000297819|SSMEM1'] 25620 10084 FETRSSFQKRY True H1975_Epitope_Rep3 1447.7208119736297 1447.71970993586 43.826 2 -1.2096990222511765 0.3634269634941979 1.0 ['nc|ENSG00000173681|A2AJT9-3|BCLAF3', 'nc|ENSG00000173681|A2AJT9-2|BCLAF3', 'ENSG00000173681|ENST00000379682|BCLAF3'] 137805 22894 YPEPIYPTL True H1975_Epitope_Rep1 1091.55391280599 1091.55280993586 95.211 2 -1.2097033606228933 0.3634269634941979 1.0 ['ENSG00000185002|ENST00000332958|RFX6'] 87278 23353 QSSVVRCRPLT True PC9_epitope_Rep1 1244.6659399497998 1244.66484993586 94.613 2 -1.2097819060985755 0.3634473399155845 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 117294 14334 VAAEALLKKV True PC9_epitope_Rep1 1040.6593809340397 1040.65828993586 59.96 2 -1.2098331002308904 0.3634552653203516 1.0 ['LAMA2|p.K3099Nfs*13|2|0.18|ENSG00000196569|chr6:129516275-129516275|G/-|frameshift_variant', 'ENSG00000196569|ENST00000421865|LAMA2', 'LAMA2|p.V2037Lfs*29|1|0.2|ENSG00000196569|chr6:129440839-129440839|G/-|frameshift_variant'] 8956 13603 AVGTVMMF True H1975_Epitope_Rep3 854.4030322223399 854.40248496793 57.609 1 -1.2098362032907726 0.36346319052777054 1.0 ['CD81|p.A70T|1|0.18|ENSG00000110651|chr11:2394121-2394121|G/A|missense_variant'] 20200 8199 ENTGHWER True NCI_RA007_Epitope_Rep5 1027.4471563216698 1027.4460499358602 38.217 2 -1.2099755070222236 0.36349601593625497 1.0 ['nc|ENSG00000196166|Q6ZUL3|LINC03042'] 100553 21951 SLPVPYTLP True PC9_epitope_Rep1 985.54843350273 985.54732993586 89.254 2 -1.2100171001154472 0.36350394043898854 1.0 ['ENSG00000006659|ENST00000392052|LGALS14'] 28136 19191 FRKKKREQ True NCI_RA007_Epitope_Rep1 1118.6672602791398 1118.6661699358601 78.796 2 -1.2100393030787795 0.36352431463359974 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 84882 19234 QHRRLVSHPRR True H1975_Epitope_Rep2 1440.8286801435197 1440.82702490379 79.829 3 -1.210192254971666 0.3635605353252412 1.0 ['ENSG00000141622|ENST00000269439|RNF165'] 121885 5079 VGPGAAQPE True PC9_epitope_Rep2 824.4028318981999 824.40172993586 24.912 2 -1.2102671685713269 0.3635605353252412 1.0 ['ENST00000452270.5_1_20:34359956-34370264:+|nuORF', 'ENST00000374000.8_1_20:34359956-34388039:+|nuORF', 'ENST00000374012.7_1_20:34359956-34389442:+|nuORF'] 100703 4221 SLREMEEGP True H1975_Epitope_Rep2 1046.47025983502 1046.46916993586 21.344 2 -1.2102687402914167 0.3635605353252412 1.0 ['ENSG00000144644|ENST00000282538|GADL1'] 108879 6819 TERTFAVP True NCI_RA007_Epitope_Rep1 919.4763311916298 919.4752299358599 30.531 2 -1.2103075239260508 0.36356845853148423 1.0 ['ENST00000425688.1_1_2:166651406-166657756:+|nuORF'] 101178 19398 SLVSLRVKP True PC9_epitope_Rep1 997.62841515893 997.62730993586 79.426 2 -1.2103551979152603 0.36358430435215616 1.0 ['ENSG00000156150|ENST00000647563|ALX3'] 122664 5045 VGTQGKPA True NCI_RA007_Epitope_Rep4 756.4130026590799 756.41190993586 25.901 2 -1.2103817184230334 0.36358430435215616 1.0 ['nc|ENSG00000123612|Q8NER5-3|ACVR1C', 'nc|ENSG00000123612|Q8NER5-4|ACVR1C', 'ENSG00000123612|ENST00000243349|ACVR1C', 'nc|ENSG00000123612|Q8NER5-2|ACVR1C', 'nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1'] 81909 12435 PSLSERQEIFT True PC9_epitope_Rep1 1305.65648038157 1305.65538993586 52.694 2 -1.2104117567123256 0.3635922269665999 1.0 ['nc|ENSG00000013288|Q9Y2E5-2|MAN2B2', 'ENSG00000013288|ENST00000285599|MAN2B2'] 15957 20819 EDTRKGKIS True PC9_epitope_Rep3 1032.55637241748 1032.55526993586 85.352 2 -1.2104657064690176 0.3635956231093849 1.0 ['ENST00000444067.2_1_1:78313713-78313869:+|nuORF'] 76619 15326 NTHTVLVSL True PC9_epitope_Rep4 982.5447451046199 982.54364993586 66.885 2 -1.2104706886901433 0.3635956231093849 1.0 ['ENST00000607166.1_1_10:31607104-31607347:-|nuORF'] 7800 5272 ASYKRAIG True PC9_epitope_Rep3 864.4817509252398 864.48064993586 25.357 2 -1.2104941522411536 0.3636035452870587 1.0 ['nc|ENSG00000141503|Q8N4C8-3|MINK1'] 4876 21169 ALGCCVRCLL True PC9_epitope_Rep4 1049.51841341109 1049.51730993586 89.59 2 -1.2106345989268819 0.3636567331391441 1.0 ['ENST00000357060.7_2_10:105990583-105992116:-|nuORF'] 30501 11055 GAGWTVPGIFY True PC9_epitope_Rep5 1166.5760452328998 1166.57494993586 47.51 2 -1.2106438036843195 0.3636567331391441 1.0 ['ENST00000469195.5_3_6:35227336-35227444:+|nuORF'] 107834 4820 TAREGLAAPP True H1975_Epitope_Rep3 981.5243440132098 981.52324993586 23.666 2 -1.2106568118839023 0.3636601274646485 1.0 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 29295 8817 FVDPGVAG True H1975_Epitope_Rep3 760.3755545211999 760.3750049679301 38.921 1 -1.2108309151291272 0.3636601274646485 1.0 ['nc|ENSG00000126775|Q6ZNE5-2|ATG14', 'ENSG00000126775|ENST00000247178|ATG14'] 95680 10838 SAVVVQLSV True PC9_epitope_Rep6 900.5280324113199 900.52692993586 52.546 2 -1.2108613809907631 0.36366804834634103 1.0 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1'] 33957 7606 GNCNWFCE True PC9_epitope_Rep3 971.32657280679 971.32546993586 34.254 2 -1.2108755872673886 0.36367257022664196 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630'] 55572 22114 LCKKIYFI True PC9_epitope_Rep2 1026.5936098733398 1026.59250993586 90.538 2 -1.210930321514273 0.36367257022664196 1.0 ['nc|ENSG00000140279|Q9NRD8|DUOX2', 'ENSG00000140279|ENST00000389039|DUOX2'] 55323 9640 LARSPLPV True NCI_RA007_Epitope_Rep1 851.5228874612299 851.5217899358599 41.497 2 -1.2109343987170982 0.36367257022664196 1.0 ['ENST00000531791.1_1_11:65149384-65149630:-|nuORF'] 97504 6529 SGPIRTPQ True PC9_epitope_Rep5 854.4610154806599 854.45990993586 30.086 2 -1.21101071938607 0.36367257022664196 1.0 ['ENSG00000026508|ENST00000428726|CD44', 'nc|ENSG00000026508|P16070-9|CD44', 'nc|ENSG00000026508|P16070-5|CD44', 'nc|ENSG00000026508|P16070-7|CD44', 'nc|ENSG00000026508|P16070-3|CD44', 'nc|ENSG00000026508|P16070-6|CD44', 'nc|ENSG00000026508|P16070-16|CD44', 'nc|ENSG00000026508|P16070-17|CD44', 'nc|ENSG00000026508|P16070-4|CD44', 'nc|ENSG00000026508|P16070-8|CD44', 'nc|ENSG00000026508|P16070-10|CD44', 'nc|ENSG00000026508|P16070-11|CD44', 'nc|ENSG00000026508|P16070-18|CD44', 'nc|ENSG00000026508|P16070-13|CD44', 'nc|ENSG00000026508|P16070-14|CD44', 'nc|ENSG00000026508|P16070-12|CD44', 'nc|ENSG00000026508|P16070-15|CD44'] 25731 7829 FFLHLCGF True PC9_epitope_Rep3 982.4734947406599 982.47238993586 35.103 2 -1.2110637518688048 0.36367257022664196 1.0 ['chr15:53523322-53684228|265|18.12|0.04|8.74|-|0|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|111'] 44175 24094 ILQTLKRHEAA True PC9_epitope_Rep3 1278.7408191422203 1278.73918490379 97.962 3 -1.2110662749289678 0.36367257022664196 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 122073 5927 VGRAPKQA True PC9_epitope_Rep5 825.48208527841 825.48098993586 27.793 2 -1.2110804351335984 0.36367257022664196 1.0 ['ENST00000347785.7_1_11:60893761-60894112:+|nuORF'] 111896 16373 TLRRLESRF True NCI_RA007_Epitope_Rep4 1176.6727395823998 1176.6716499358602 70.982 2 -1.2110830359970755 0.36367257022664196 1.0 ['ENSG00000119636|ENST00000394009|BBOF1', 'ENST00000489323.5_1_14:74495895-74513566:+|nuORF'] 46727 20659 IVALDLLSGL True PC9_epitope_Rep4 1012.6168474157199 1012.61574993586 87.622 2 -1.2110867288481315 0.36367257022664196 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF', 'ENST00000426249.1_1_17:18365525-18365891:+|nuORF', 'nc|ENSG00000105576|O14787-2|TNPO2', 'ENSG00000105576|ENST00000425528|TNPO2'] 100037 19842 SLKKFLNTK True PC9_epitope_Rep5 1077.65462990677 1077.6535299358602 81.37 2 -1.2111458065726608 0.36367257022664196 1.0 ['nc|ENSG00000272980|O95684-2|CEP43', 'ENSG00000213066|ENST00000366847|CEP43', 'ENST00000609590.1_1_6:167412900-167416770:+|nuORF', 'ENST00000494781.5_1_6:167412945-167425107:+|nuORF'] 125518 16702 VLVSGVHK True PC9_epitope_Rep2 837.5072373970901 837.50614993586 69.492 2 -1.2111873425663584 0.36368048986906953 1.0 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'KDM3B|p.A1619Rfs*25|1|0.09|ENSG00000120733|chr5:138429926-138429927|-/C|frameshift_variant', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B', 'ENST00000505756.1_1_5:137759865-137761276:+|nuORF'] 14632 16066 DVLVFLRH True PC9_epitope_Rep4 997.57090028281 997.56980993586 69.732 2 -1.2113069387342332 0.3637133007255846 1.0 60584 8098 LIRTSYEK True NCI_RA007_Epitope_Rep5 1008.5603951687599 1008.55928993586 37.838 2 -1.2113288587591255 0.3637246117084827 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9'] 19450 13886 ELPSHRTVL True PC9_epitope_Rep1 1050.5821932425001 1050.58108993586 58.252 2 -1.211361408275555 0.3637246117084827 1.0 ['ENSG00000123485|ENST00000411486|HJURP'] 125730 11766 VNETQLDQP True PC9_epitope_Rep3 1042.4931034545798 1042.49200993586 50.277 2 -1.2113803657942102 0.3637246117084827 1.0 ['nc|ENSG00000106336|O75426-2|FBXO24', 'nc|ENSG00000106336|O75426-4|FBXO24', 'ENSG00000106336|ENST00000241071|FBXO24', 'nc|ENSG00000106336|O75426-3|FBXO24'] 16857 19317 EFSISSNIIQF True PC9_epitope_Rep1 1283.63976768827 1283.6386699358602 79.108 2 -1.2114990044589116 0.36375175778090274 1.0 ['ENSG00000180332|ENST00000379108|KCTD4'] 111006 5375 TLDGYGIHPK True NCI_RA007_Epitope_Rep2 1099.56620882519 1099.5651099358602 25.527 2 -1.2115075481548 0.36375175778090274 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1', 'NFE2L1|p.E236Gfs*9|1|0.26|ENSG00000082641|chr17:48056577-48056578|-/G|frameshift_variant', 'NFE2L1|p.V163Sfs*14|1|0.24|ENSG00000082641|chr17:48051596-48051597|-/C|frameshift_variant'] 125303 11808 VLRSWWPRWWW True NCI_RA007_Epitope_Rep1 1656.8466216234397 1656.8449649037902 49.91 3 -1.2115151762722405 0.36375175778090274 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 12394 6410 DKEHIYDEQPP True H1975_Epitope_Rep1 1369.6150094924099 1369.6139099358602 29.715 2 -1.2115331122868909 0.36375175778090274 1.0 ['nc|ENSG00000197822|Q16625-3|OCLN', 'ENSG00000197822|ENST00000396442|OCLN', 'nc|ENSG00000197822|Q16625-4|OCLN'] 84113 10399 QEQLKRFRH True H1975_Epitope_Rep2 1240.678887592 1240.6777899358601 45.013 2 -1.2115821344069162 0.36375175778090274 1.0 ['ENSG00000174885|ENST00000534750|NLRP6', 'nc|ENSG00000174885|P59044|NLRP6'] 38075 7708 HENCKHTRL True PC9_epitope_Rep2 1136.5509101975601 1136.5492649037901 35.025 3 -1.211661386060167 0.3637596754523507 1.0 ['ENST00000433921.5_1_2:219503064-219516433:-|nuORF', 'nc|ENSG00000115568|P52746|ZNF142', 'ENSG00000115568|ENST00000411696|ZNF142'] 76683 15497 NTLERREKHEK True PC9_epitope_Rep4 1438.7640737679396 1438.7629699358602 67.535 2 -1.2117440772383314 0.3637755102040816 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 138643 23494 YRRQLQARTIE True NCI_RA007_Epitope_Rep3 1432.7898945929594 1432.7887899358602 101.95 2 -1.2117512740724936 0.3637755102040816 1.0 ['ENSG00000148798|ENST00000369849|INA'] 126989 23208 VPWLWLISKYR True PC9_epitope_Rep5 1459.83399125107 1459.83288993586 94.25 2 -1.2118254447875936 0.3637902071797424 1.0 ['ENST00000234256.3_1_2:65249225-65249402:+|nuORF'] 22334 12012 ETEKEKIKK True H1975_Epitope_Rep1 1131.6499384491497 1131.6488499358602 51.212 2 -1.2118349224418803 0.3637902071797424 1.0 ['ENSG00000179051|ENST00000375436|RCC2'] 78345 7391 PATHSGPH True PC9_epitope_Rep5 802.3722004762601 802.37110993586 33.386 2 -1.211850032348723 0.3637902071797424 1.0 ['ACLY|p.M417Nfs*42|1|0.12|ENSG00000131473|chr17:41898719-41898720|-/T|frameshift_variant'] 115270 5003 TVDLNQVL True NCI_RA007_Epitope_Rep2 900.4916469025999 900.49054993586 24.085 2 -1.2118713467109534 0.3637902071797424 1.0 ['ENSG00000131737|ENST00000394001|KRT34', 'CON__O76011', 'ENSG00000006059|ENST00000007735|KRT33A', 'CON__Q6NTB9', 'CON__O76009', 'CON__Q8IUT8'] 34437 7455 GQAFRTLP True NCI_RA007_Epitope_Rep3 888.4817509252399 888.48064993586 36.445 2 -1.2118901892883838 0.3637902071797424 1.0 ['ENST00000301618.8_1_17:74946102-74946387:+|nuORF'] 18357 6909 EIWTHEDK True NCI_RA007_Epitope_Rep4 1056.48762415132 1056.48652993586 33.194 2 -1.2119869768592761 0.3638512840931714 1.0 ['ENSG00000069206|ENST00000175238|ADAM7'] 54987 13081 LAIIFLPM True NCI_RA007_Epitope_Rep1 916.54559705176 916.54448993586 54.876 2 -1.2120272229007347 0.3638512840931714 1.0 ['nc|ENSG00000175193|Q9H300-2|PARL', 'PARL|p.G375Rfs*5|1|0.17|ENSG00000175193|chr3:183829615-183829616|-/T|frameshift_variant', 'ENSG00000175193|ENST00000317096|PARL'] 133253 10082 WEEMRDKMRKW True H1975_Epitope_Rep1 1593.7544376843698 1593.7533499358601 43.716 2 -1.2120273169956393 0.3638512840931714 1.0 ['ENSG00000104412|ENST00000220853|EMC2', 'ENST00000517593.5_1_8:109455866-109468189:+|nuORF'] 128730 4352 VSPPTHGR True NCI_RA007_Epitope_Rep5 849.44569976969 849.44460993586 23.351 2 -1.2121841110558973 0.36389652726797644 1.0 ['nc|ENSG00000101901|Q9NP73-4|ALG13', 'nc|ENSG00000101901|Q9NP73-3|ALG13', 'ENSG00000101901|ENST00000394780|ALG13'] 37146 19969 GVTFLLLP True H1975_Epitope_Rep2 858.5214904788999 858.5209449679301 82.789 1 -1.212266259451616 0.36397456794117283 1.0 ['ENSG00000188124|ENST00000641124|OR2AG2'] 69628 4587 LVVCRCSNP True PC9_epitope_Rep4 989.4786567740899 989.4781049679301 24.141 1 -1.2122704958153632 0.36397456794117283 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 121705 13936 VGLPLGLSAG True H1975_Epitope_Rep3 882.51746772762 882.51636993586 58.918 2 -1.212329010695497 0.3639779527950929 1.0 ['ENSG00000250510|ENST00000311268|GPR162', 'nc|ENSG00000250510|Q16538-2|GPR162'] 17973 13391 EIFVNFMEPCY True H1975_Epitope_Rep2 1390.59374609598 1390.59208490379 56.643 3 -1.2123673979453597 0.3639779527950929 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214', 'NUP214|p.G1260Efs*98|1|0.19|ENSG00000126883|chr9:131197269-131197269|G/-|frameshift_variant', 'ENST00000525561.1_1_9:134008494-134010392:+|nuORF'] 124032 23539 VKMMKLHL True PC9_epitope_Rep6 998.5769142633799 998.57580993586 103.69 2 -1.2125162008468313 0.36399830791051835 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 57517 23363 LEKRGITSK True PC9_epitope_Rep1 1030.61349337078 1030.6123899358602 94.651 2 -1.2125781277596672 0.36401866251944015 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST'] 125925 10884 VNYIYFKALWE True H1975_Epitope_Rep1 1444.7390878067197 1444.73798993586 46.825 2 -1.2126230554010005 0.3640265750970439 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 140528 23342 YYKKTLLLAR True PC9_epitope_Rep3 1267.7652429849097 1267.76467496793 95.064 1 -1.2126443859873388 0.36403448747776107 1.0 ['ENSG00000121957|ENST00000264126|GPSM2'] 48250 20946 KDFRIIQLD True PC9_epitope_Rep3 1146.6397081186199 1146.6386099358601 85.847 2 -1.2126589874961287 0.36404239966159896 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'ENST00000528389.1_1_8:11152715-11157663:+|nuORF'] 114688 10150 TSSGYQPRP True PC9_epitope_Rep6 991.4723084403499 991.47120993586 49.665 2 -1.2127069325180413 0.3640468726675623 1.0 ['ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF'] 83596 5291 QDTRSNLDI True PC9_epitope_Rep2 1060.51490152832 1060.51380993586 25.74 2 -1.212736698100552 0.3640468726675623 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA'] 12899 15091 DLLYRLLT True PC9_epitope_Rep1 1005.58588164061 1005.58478993586 62.867 2 -1.2127430499796146 0.3640468726675623 1.0 ['nc|ENSG00000104517|O95071-2|UBR5', 'ENSG00000104517|ENST00000520539|UBR5', 'UBR5|p.E2121Kfs*28|1|0.15|ENSG00000104517|chr8:102277121-102277121|T/-|frameshift_variant'] 79886 5592 PILLLLLLSL True PC9_epitope_Rep5 1106.76786875386 1106.76676993586 26.512 2 -1.2127658794315326 0.3640468726675623 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 12563 12057 DLDIPSGFQMV True PC9_epitope_Rep5 1220.57472490356 1220.57308490379 51.373 3 -1.2128162456539626 0.3640468726675623 1.0 ['ENST00000016171.5_1_10:101474196-101474316:-|nuORF'] 402 19689 AALIVLTE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 82.646 2 -1.2128265850537499 0.3640468726675623 1.0 ['nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF', 'chr15:72202620-72203022|122|30.08|0.97|4.96|-|1|PKM,PKM|1'] 104521 16824 SSRKSKKRAF True NCI_RA007_Epitope_Rep4 1193.6992886834098 1193.69818993586 72.897 2 -1.2128626462519165 0.3640468726675623 1.0 ['ENSG00000182752|ENST00000328252|PAPPA'] 110243 11624 TIERWTKE True H1975_Epitope_Rep2 1061.5505587610498 1061.54946993586 49.78 2 -1.2128638780780694 0.3640468726675623 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1'] 36241 16974 GVGFWFNF True NCI_RA007_Epitope_Rep3 972.4493881677998 972.4488349679301 74.631 1 -1.212864680135559 0.3640468726675623 1.0 ['ENST00000358127.8_1_9:36833483-36833678:-|nuORF'] 91418 23315 RNKHKIHV True PC9_epitope_Rep2 1030.6148307834599 1030.6137299358602 95.157 2 -1.2128679484355112 0.3640468726675623 1.0 ['ENSG00000278053|ENST00000617633|DDX52'] 119199 17391 VEKLNVFLSPP True PC9_epitope_Rep4 1241.7019740220098 1241.70086993586 74.896 2 -1.2129340883545912 0.36408304412185444 1.0 ['nc|ENSG00000148735|Q5SXH7-4|PLEKHS1', 'nc|ENSG00000148735|Q5SXH7-3|PLEKHS1', 'nc|ENSG00000148735|Q5SXH7-2|PLEKHS1', 'nc|ENSG00000148735|Q5SXH7-1|PLEKHS1', 'nc|ENSG00000148735|Q5SXH7|PLEKHS1', 'ENSG00000148735|ENST00000694986|PLEKHS1'] 7708 9366 ASQQQVEVYKI True NCI_RA007_Epitope_Rep1 1291.67721582615 1291.67610993586 40.423 2 -1.2129344339336825 0.36408304412185444 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 77907 23812 PAHRWSWTT True H1975_Epitope_Rep2 1140.54647644012 1140.54484490379 98.098 3 -1.2129375567883298 0.36408304412185444 1.0 ['ENST00000356613.3_2_8:143695553-143695679:-|nuORF'] 5462 12764 ALYNAEEL True NCI_RA007_Epitope_Rep3 921.4443623570099 921.44326993586 57.444 2 -1.2130399596289305 0.36414071051845953 1.0 ['nc|ENSG00000122483|Q5T9S5-2|CCDC18', 'nc|ENSG00000122483|Q5T9S5|CCDC18', 'ENSG00000122483|ENST00000690025|CCDC18'] 81995 7588 PSSPPTKRV True PC9_epitope_Rep4 967.5450794577899 967.5439899358599 36.567 2 -1.2130780028753991 0.3641610587986516 1.0 ['ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3'] 93555 14208 RSRIEILRR True NCI_RA007_Epitope_Rep4 1197.7418222017297 1197.74017490379 61.932 3 -1.2131103596058828 0.3641814065726298 1.0 ['CON__P02672'] 63568 10653 LPLHGVAD True PC9_epitope_Rep4 820.4443027873599 820.44320993586 48.726 2 -1.213169062110551 0.3642096621722474 1.0 ['RNF130|p.N172Tfs*6|1|0.34|ENSG00000113269|chr5:180013239-180013239|T/-|frameshift_variant', 'nc|ENSG00000113269|Q86XS8-2|RNF130', 'ENSG00000113269|ENST00000521389|RNF130'] 84427 8265 QGHAYNKSFE True NCI_RA007_Epitope_Rep5 1179.5308859456302 1179.52924490379 38.469 3 -1.2131781272569129 0.3642096621722474 1.0 ['ENSG00000160111|ENST00000443236|CPAMD8', 'nc|ENSG00000160111|Q8IZJ3-2|CPAMD8', 'CPAMD8|p.V1154Sfs*25|1|0.33|ENSG00000160111|chr19:16928060-16928060|C/-|frameshift_variant'] 140827 9629 YYSSPAQQVP True PC9_epitope_Rep4 1138.5294889633 1138.52838993586 44.661 2 -1.2132063733546585 0.3642118879118419 1.0 ['ENSG00000169905|ENST00000609928|TOR1AIP2'] 14153 5334 DSLDLLRYFT True PC9_epitope_Rep5 1241.6292030045697 1241.6275649037902 25.529 3 -1.2132289727687904 0.3642118879118419 1.0 ['ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21'] 123277 25238 VHRPRVPHICR True NCI_RA007_Epitope_Rep5 1368.7673257569197 1368.76622993586 104.6 2 -1.2132437948779096 0.3642118879118419 1.0 ['ENST00000496259.5_1_7:149431420-149431519:+|nuORF'] 23285 11446 EVRWFYKEDKK True NCI_RA007_Epitope_Rep1 1526.7881632574597 1526.78706993586 48.486 2 -1.2132447755167755 0.3642118879118419 1.0 ['nc|ENSG00000100523|Q8NEL9-2|DDHD1', 'nc|ENSG00000100523|Q8NEL9-4|DDHD1', 'ENSG00000100523|ENST00000673822|DDHD1'] 109079 13795 TFENYYRKQRR True NCI_RA007_Epitope_Rep2 1559.7957082493897 1559.79460993586 58.308 2 -1.2132652410685187 0.3642118879118419 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 24354 13189 FADQHVEIP True PC9_epitope_Rep4 1054.5083595959 1054.5072699358602 58.629 2 -1.2134039508898404 0.3642819830352479 1.0 ['nc|ENSG00000164347|Q969S9-2|GFM2', 'nc|ENSG00000164347|Q969S9-3|GFM2', 'ENSG00000164347|ENST00000296805|GFM2', 'nc|ENSG00000164347|Q969S9-5|GFM2', 'nc|ENSG00000164347|Q969S9-4|GFM2'] 3512 4171 AGLRQQEQN True H1975_Epitope_Rep3 1042.5155702346597 1042.51446993586 21.161 2 -1.2134408116357442 0.3642898896807333 1.0 ['ENSG00000248746|ENST00000513398|ACTN3'] 78618 3526 PDSTRPWLES True H1975_Epitope_Rep2 1186.56185172074 1186.56019490379 18.426 3 -1.2134988087805405 0.3643102333217253 1.0 ['ENSG00000130487|ENST00000648057|KLHDC7B'] 122990 10560 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 45.566 2 -1.213585793072997 0.3643136084371813 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 8644 14863 AVAQFKKY True PC9_epitope_Rep1 953.5334521449299 953.53234993586 61.99 2 -1.2135900955627428 0.3643136084371813 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 116369 13191 TVYKAYHVP True PC9_epitope_Rep2 1076.5654805492 1076.5643899358602 56.017 2 -1.2136424156857615 0.36433395102416455 1.0 ['ENST00000560591.5_1_15:67835673-67951132:+|nuORF', 'nc|ENSG00000137764|Q13163-4|MAP2K5', 'nc|ENSG00000137764|Q13163-2|MAP2K5', 'nc|ENSG00000137764|Q13163-3|MAP2K5', 'ENSG00000137764|ENST00000178640|MAP2K5'] 65434 11951 LSEVWQKV True PC9_epitope_Rep2 987.5389314481899 987.53782993586 51.292 2 -1.2137670439335821 0.36434976184257983 1.0 ['nc|ENSG00000118557|Q8TBY8-3|PMFBP1', 'nc|ENSG00000118557|Q8TBY8-4|PMFBP1', 'ENSG00000118557|ENST00000237353|PMFBP1', 'nc|ENSG00000118557|Q8TBY8-1|PMFBP1'] 72311 11915 MSHWLYDVLS True H1975_Epitope_Rep3 1249.58014463717 1249.5790499358602 50.984 2 -1.2137691895242597 0.36434976184257983 1.0 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF'] 79731 11677 PHRRQDPK True NCI_RA007_Epitope_Rep4 1032.5577098301599 1032.55660993586 51.875 2 -1.213857469502822 0.36438253948513866 1.0 ['ENST00000398495.6_1_18:47803541-47806282:-|nuORF'] 74953 11608 NLTVRIDI True PC9_epitope_Rep5 942.5498304850599 942.54872993586 49.647 2 -1.2139661223556848 0.36441078446003083 1.0 ['ENSG00000102837|ENST00000219022|OLFM4'] 128580 10635 VSKEQDHFLIS True PC9_epitope_Rep2 1301.66156576201 1301.6604699358602 46.22 2 -1.2139700328666625 0.36441078446003083 1.0 ['nc|ENSG00000075340|P35612-2|ADD2', 'nc|ENSG00000075340|P35612-8|ADD2', 'nc|ENSG00000075340|P35612-9|ADD2', 'nc|ENSG00000075340|P35612-4|ADD2', 'nc|ENSG00000075340|P35612-3|ADD2', 'ENSG00000075340|ENST00000264436|ADD2', 'nc|ENSG00000075340|P35612-5|ADD2', 'nc|ENSG00000075340|P35612-6|ADD2', 'ADD2|p.C282Sfs*6|1|0.24|ENSG00000075340|chr2:70690790-70690790|C/-|frameshift_variant'] 122999 11727 VGWSDSYTCEY True PC9_epitope_Rep5 1308.49686850568 1308.4957699358602 50.107 2 -1.2139972770849452 0.36441415673887634 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 85688 6301 QLRFWKHWHSR True NCI_RA007_Epitope_Rep5 1579.8272831611898 1579.82563490379 30.915 3 -1.2140056799093668 0.36441415673887634 1.0 ['nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'chr1:24319941-24331426|424|14.04|0.52|4.74|+|ENST00000524724|GRHL3,GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3'] 101288 10113 SLWVAASV True PC9_epitope_Rep3 831.4490538146299 831.44794993586 43.85 2 -1.2140394507486563 0.3644344960517316 1.0 ['DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 70630 13525 MAPTGHST True NCI_RA007_Epitope_Rep5 800.3486881503601 800.34758993586 58.711 2 -1.2140988924635912 0.3644423995224831 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN'] 66705 18720 LSTKFKYRYE True PC9_epitope_Rep2 1333.7030366511697 1333.70192993586 77.38 2 -1.2141272856068346 0.3644457708473227 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'RAG1|p.G933E|1|0.24|ENSG00000166349|chr11:36576102-36576102|G/A|missense_variant'] 72888 10386 NAVGEYRAP True PC9_epitope_Rep5 975.4773938207899 975.47628993586 44.933 2 -1.2141410267946346 0.3644457708473227 1.0 ['ENST00000494660.6_1_2:71356995-71357340:-|nuORF'] 98849 11071 SIVASIYKD True PC9_epitope_Rep5 994.53351171458 994.53240993586 47.573 2 -1.2142777763834234 0.36446947936484253 1.0 ['ENSG00000163638|ENST00000498707|ADAMTS9', 'nc|ENSG00000163638|Q9P2N4-2|ADAMTS9', 'ENST00000475557.5_1_3:64600969-64673333:-|nuORF', 'ADAMTS9|p.L1225Cfs*12|1|0.26|ENSG00000163638|chr3:64603996-64603996|G/-|frameshift_variant', 'ADAMTS9|p.L1304*|1|0.6|ENSG00000163638|chr3:64602052-64602052|G/-|frameshift_variant', 'ENST00000482490.5_1_3:64536549-64672246:-|nuORF', 'nc|ENSG00000163638|Q9P2N4-1|ADAMTS9'] 27093 21458 FLPVKLIFV True PC9_epitope_Rep4 1074.6841391299 1074.68304993586 90.728 2 -1.214287945168484 0.36446947936484253 1.0 ['ENSG00000072954|ENST00000187762|TMEM38A'] 15288 13050 EAHNFTDGFSL True PC9_epitope_Rep5 1236.54111627616 1236.54000993586 55.201 2 -1.2142936456340792 0.36446947936484253 1.0 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000547997.5_1_12:95650374-95694446:+|nuORF', 'ENST00000552660.5_1_12:95650374-95694446:+|nuORF', 'ENST00000546398.5_1_12:95611596-95687545:+|nuORF', 'ENST00000549192.5_1_12:95650374-95690042:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-2|VEZT'] 7646 13242 ASLRPTLLAGL True NCI_RA007_Epitope_Rep1 1110.67609362734 1110.6749899358601 55.508 2 -1.2143526342560176 0.36448981621944243 1.0 ['ENST00000371933.7_1_1:47184331-47184493:-|nuORF'] 6628 23008 APWRWRWRRWR True PC9_epitope_Rep4 1710.9232492346996 1710.92214993586 96.719 2 -1.2144351125175297 0.36449318611359793 1.0 ['ENST00000253814.5_1_5:141488387-141511833:+|nuORF'] 16594 6486 EERQEALRQAE True H1975_Epitope_Rep3 1357.6586056398899 1357.6575099358602 29.916 2 -1.2144770111292627 0.36449318611359793 1.0 ['ENSG00000168993|ENST00000304062|CPLX1', 'ENST00000506404.1_1_4:780291-786430:-|nuORF'] 27071 21750 FLPHHIMVKIF True PC9_epitope_Rep4 1380.7740338468 1380.77239490379 91.856 3 -1.2145469369795885 0.36450666401432263 1.0 ['ENSG00000178974|ENST00000313833|FBXO34'] 62857 26744 LMMVKKRWK True PC9_epitope_Rep5 1218.7093254152599 1218.7082299358601 109.12 2 -1.2145824892913062 0.36450666401432263 1.0 ['ENST00000560307.5_1_15:101821921-101825192:-|nuORF'] 75059 1141 NMGVHKAL True NCI_RA007_Epitope_Rep1 868.45890730568 868.45780993586 6.0292 2 -1.2146103077031598 0.36450666401432263 1.0 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000456826.2_1_1:149262279-149263299:+|nuORF'] 79599 14427 PGVTFKLLL True NCI_RA007_Epitope_Rep3 986.6164534928998 986.61534993586 64.059 2 -1.2146305456336466 0.36450666401432263 1.0 ['ENST00000361246.6_1_14:103432671-103433458:-|nuORF'] 56009 18621 LDKARRRPRPW True NCI_RA007_Epitope_Rep2 1449.8429332253297 1449.84182993586 77.229 2 -1.2146408585578012 0.36450666401432263 1.0 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.K1222Rfs*34|1|0.12|ENSG00000104237|chr8:54627546-54627547|-/GG|frameshift_variant'] 82758 11909 PVQQGLFI True PC9_epitope_Rep2 900.5069030439199 900.50580993586 51.131 2 -1.2146823854848332 0.36450666401432263 1.0 ['nc|ENSG00000162419|Q9Y692|GMEB1'] 98957 17732 SKEKKVVKPV True NCI_RA007_Epitope_Rep3 1140.72304381976 1140.72139490379 77.75 3 -1.2146943827330683 0.36450666401432263 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 92352 13262 RQPGPHAD True NCI_RA007_Epitope_Rep3 876.42021329784 876.41910993586 59.439 2 -1.2147325320243982 0.36450666401432263 1.0 ['ENST00000360416.7_1_17:8378161-8378500:-|nuORF'] 128501 18109 VSFYYAPF True NCI_RA007_Epitope_Rep5 992.4643695255997 992.46326993586 76.459 2 -1.2148322764223418 0.3645269976253528 1.0 ['ENSG00000203663|ENST00000641771|OR2L2'] 114520 7462 TSGPLLDRV True H1975_Epitope_Rep2 956.52909504048 956.52798993586 33.65 2 -1.2149065255978335 0.36453489817738766 1.0 ['nc|ENSG00000100253|Q9UGB7-2|MIOX', 'ENSG00000100253|ENST00000216075|MIOX'] 43463 8305 IHSTTTTP True PC9_epitope_Rep2 856.4290466460401 856.4279499358599 37.309 2 -1.2150137796572495 0.3645710307445579 1.0 ['nc|ENSG00000120685|Q86XN7-2|PROSER1', 'ENSG00000120685|ENST00000352251|PROSER1'] 65780 11509 LSIPRLDLGDP True NCI_RA007_Epitope_Rep1 1194.6608374860198 1194.6597499358602 48.733 2 -1.2150243768872522 0.3645710307445579 1.0 ['ENST00000588831.5_1_19:36428129-36428243:+|nuORF'] 78903 9736 PEVTIGAHQT True PC9_epitope_Rep5 1051.52982331647 1051.5287299358602 42.42 2 -1.21504525196217 0.3645710307445579 1.0 ['ENSG00000130414|ENST00000252711|NDUFA10', 'nc|ENSG00000130414|O95299-2|NDUFA10'] 134155 15635 WRHKLIHCVGP True PC9_epitope_Rep3 1344.72372960944 1344.7226299358601 65.286 2 -1.2150914698900206 0.3645868297716282 1.0 ['ENST00000540664.5_1_10:98592059-98593206:+|nuORF'] 58117 16935 LERYGPLL True PC9_epitope_Rep1 959.5440168286298 959.54290993586 69.963 2 -1.2150987403087525 0.3645868297716282 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'RSF1|p.K386Nfs*6|1|0.19|ENSG00000048649|chr11:77702071-77702071|T/-|frameshift_variant'] 122985 9023 VGWSDSYTCEY True PC9_epitope_Rep2 1308.49686850568 1308.4957699358602 40.057 2 -1.2151604498709863 0.3646026280130779 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 22043 5370 ESRFTLLLMP True NCI_RA007_Epitope_Rep2 1205.6478302741698 1205.64619490379 25.506 3 -1.2151615009296863 0.3646026280130779 1.0 ['ENST00000173527.5_1_5:128442675-128442732:+|nuORF'] 58543 11833 LFDLIESMLEY True H1975_Epitope_Rep3 1371.6632055547902 1371.6621099358601 50.663 2 -1.2152027949709867 0.3646059943065276 1.0 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF', 'ENSG00000176444|ENST00000368361|CLK2', 'nc|ENSG00000176444|P49760-3|CLK2'] 15392 9996 EALREFEAI True PC9_epitope_Rep4 1076.55022440788 1076.54912993586 46.11 2 -1.215226978576532 0.3646059943065276 1.0 ['ENSG00000123607|ENST00000243344|TTC21B', 'ENST00000476227.1_1_2:166805880-166810281:-|nuORF', 'nc|ENSG00000123607|Q7Z4L5-2|TTC21B', 'ENST00000464374.5_1_2:166785584-166810215:-|nuORF'] 16095 13948 EEDVTLALKEL True H1975_Epitope_Rep1 1258.66564808294 1258.6645499358601 58.806 2 -1.2153445063990096 0.3646295536746337 1.0 ['ENSG00000075539|ENST00000358350|FRYL', 'nc|ENSG00000075539|O94915-2|FRYL'] 27272 14241 FLYNFDIFKKK True H1975_Epitope_Rep1 1461.8020224164495 1461.80092993586 59.959 2 -1.215362866425819 0.3646295536746337 1.0 ['SLC5A8|p.S563Y|1|0.12|ENSG00000256870|chr12:101158271-101158271|G/T|missense_variant'] 4992 18333 ALKYEALRAP True PC9_epitope_Rep4 1130.6447934990597 1130.64368993586 78.585 2 -1.2153692619704184 0.3646295536746337 1.0 ['ENST00000526990.1_1_11:65349145-65351290:+|nuORF', 'ENSG00000173442|ENST00000309295|EHBP1L1'] 16099 4916 EEEAAARK True PC9_epitope_Rep1 902.4457593393398 902.44466993586 23.772 2 -1.2153928868219075 0.3646295536746337 1.0 ['ENSG00000123600|ENST00000375258|METTL8', 'nc|ENSG00000123600|Q9H825-2|METTL8', 'nc|ENSG00000123600|Q9H825|METTL8'] 33580 7367 GLKVVGGK True NCI_RA007_Epitope_Rep3 756.4857736765198 756.48466993586 36.104 2 -1.2154614123450735 0.3646295536746337 1.0 ['nc|ENSG00000176406|Q9UQ26-4|RIMS2', 'nc|ENSG00000176406|Q9UQ26-5|RIMS2', 'nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-2|RIMS2', 'nc|ENSG00000079841|Q86UR5-8|RIMS1', 'nc|ENSG00000079841|Q86UR5-7|RIMS1', 'nc|ENSG00000079841|Q86UR5-6|RIMS1', 'nc|ENSG00000079841|Q86UR5-5|RIMS1', 'nc|ENSG00000079841|Q86UR5-3|RIMS1', 'nc|ENSG00000079841|Q86UR5-4|RIMS1', 'ENSG00000079841|ENST00000521978|RIMS1', 'nc|ENSG00000079841|Q86UR5-10|RIMS1', 'RIMS1|p.P777Lfs*6|1|0.46|ENSG00000079841|chr6:72250417-72250417|C/-|frameshift_variant', 'nc|ENSG00000079841|Q86UR5-13|RIMS1', 'nc|ENSG00000079841|Q86UR5-9|RIMS1', 'nc|ENSG00000079841|Q86UR5-12|RIMS1', 'nc|ENSG00000079841|Q86UR5-2|RIMS1', 'ENST00000524197.1_1_6:72926891-72975792:+|nuORF'] 105616 12767 SVERVLEIIK True H1975_Epitope_Rep3 1184.71287305888 1184.71176993586 54.322 2 -1.215516332005166 0.3646295536746337 1.0 ['nc|ENSG00000141627|Q7RTS9|DYM', 'ENSG00000141627|ENST00000675505|DYM', 'nc|ENSG00000141627|Q7RTS9-2|DYM', 'ENST00000583270.1_1_18:46623573-46623861:-|nuORF'] 24721 6806 FAWRHFYWYLT True NCI_RA007_Epitope_Rep2 1588.7615545867998 1588.7599049037901 31.089 3 -1.215525709783395 0.3646295536746337 1.0 ['nc|ENSG00000101278|Q9NQ39|RPS10P5', 'ENST00000480942.1_1_6:34392413-34392935:-|nuORF', 'ENST00000439253.1_1_9:90631298-90631598:+|nuORF', 'ENST00000477729.1_1_15:60696796-60696997:+|nuORF', 'ENSG00000124614|ENST00000648437|RPS10', 'chr6:34425221-34425583|502|33.66|0.0|21.68|-|ENST00000494077|RPS10-NUDT3,RPS10', 'ENST00000440748.1_1_7:37415149-37415623:+|nuORF', 'ENST00000408001.1_1_6:34712123-34712447:+|nuORF'] 127689 24778 VRGHLKKKR True PC9_epitope_Rep3 1120.73052924204 1120.72942993586 100.69 2 -1.2155317152577465 0.3646295536746337 1.0 ['ENSG00000196562|ENST00000688720|SULF2', 'nc|ENSG00000196562|Q8IWU5-2|SULF2'] 62042 21009 LLLVSSPP True PC9_epitope_Rep2 824.50075503432 824.50020496793 86.265 1 -1.2155666337518025 0.3646295536746337 1.0 ['ENST00000428865.2_1_6:74404306-74404579:-|nuORF'] 46531 9236 ITQLKIENN True H1975_Epitope_Rep1 1071.59242357303 1071.5913299358601 40.436 2 -1.215640729447738 0.3646295536746337 1.0 ['TBX5|p.H220N|1|0.17|ENSG00000089225|chr12:114394746-114394746|G/T|missense_variant', 'TBX4|p.G248Dfs*22|1|0.11|ENSG00000121075|chr17:61479919-61479919|G/-|frameshift_variant', 'nc|ENSG00000089225|Q99593-2|TBX5', 'TBX5|p.S383Lfs*11|1|0.11|ENSG00000089225|chr12:114355941-114355941|G/-|frameshift_variant', 'nc|ENSG00000089225|Q99593-3|TBX5', 'ENSG00000089225|ENST00000405440|TBX5', 'nc|ENSG00000121075|P57082|TBX4', 'ENSG00000121075|ENST00000644296|TBX4'] 139939 4073 YVHRQVRPEAW True NCI_RA007_Epitope_Rep2 1439.74221612455 1439.74057490379 20.481 3 -1.215689366846229 0.3646295536746337 1.0 ['KIRREL-CD1C|1|fusion', 'ENSG00000158481|ENST00000368170|CD1C'] 67894 15580 LTKRPRYLV True PC9_epitope_Rep2 1144.70806246196 1144.7069699358601 65.202 2 -1.2157458548418885 0.3646295536746337 1.0 ['ENST00000549469.1_1_2:176973927-176983694:+|nuORF'] 35081 24635 GRKAGPPP True PC9_epitope_Rep4 778.4449714936999 778.44386993586 103.25 2 -1.2157462680428242 0.3646295536746337 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 79500 5743 PGQAERASL True PC9_epitope_Rep1 927.4773938207899 927.47628993586 26.908 2 -1.2157825680921786 0.3646295536746337 1.0 ['ENST00000322048.11_1_16:4852562-4852868:-|nuORF'] 68679 24571 LVCYARIYRRL True NCI_RA007_Epitope_Rep1 1424.8074592333999 1424.8063699358602 101.78 2 -1.215865166856353 0.36466230828506796 1.0 ['ENSG00000264717|ENST00000576178|NPY4R2'] 137041 19645 YKTFLIWVLI True NCI_RA007_Epitope_Rep5 1294.76893138302 1294.7678299358602 82.478 2 -1.215980819289144 0.3647074907716974 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 55957 13289 LDIAGDED True H1975_Epitope_Rep2 846.3606923027 846.3601449679301 56.246 1 -1.2160797954040448 0.3647775292070594 1.0 ['nc|ENSG00000185437|P55822|SH3BGR', 'ENSG00000185437|ENST00000333634|SH3BGR'] 80213 18738 PLALIVVMY True H1975_Epitope_Rep2 1017.59327552017 1017.5921699358599 77.781 2 -1.2161256515786802 0.3647978523756851 1.0 ['ENSG00000148734|ENST00000277942|NPFFR1'] 16329 9154 EEKEHLLQ True H1975_Epitope_Rep3 1024.5189242796 1024.5178299358602 40.2 2 -1.216164647888973 0.36480121297987894 1.0 ['ENSG00000155827|ENST00000389120|RNF20', 'ENST00000478072.2_1_9:104323064-104323554:+|nuORF'] 29362 19413 FVEFLFHI True PC9_epitope_Rep6 1050.5538532363398 1050.5527499358602 87.328 2 -1.2161669136229218 0.36480121297987894 1.0 ['ENSG00000067167|ENST00000262213|TRAM1', 'nc|ENSG00000067167|Q15629-2|TRAM1'] 55714 14418 LDDLLQRLHHN True H1975_Epitope_Rep3 1372.7211463268 1372.72004993586 60.813 2 -1.2162171334129521 0.36480910717836545 1.0 ['ENSG00000084774|ENST00000264705|CAD'] 67494 19088 LTELEKAT True PC9_epitope_Rep3 903.49131254943 903.49020993586 78.646 2 -1.2162194909197532 0.36481246737752593 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'FARP2|p.C654F|1|0.44|ENSG00000006607|chr2:241468207-241468207|G/T|missense_variant'] 100901 14442 SLSKRAQDF True PC9_epitope_Rep2 1050.5458077337796 1050.54470993586 60.82 2 -1.216342625570576 0.36481246737752593 1.0 ['ENST00000587858.5_2_17:40714180-40714430:+|nuORF'] 100618 12280 SLQNWLNRHSW True NCI_RA007_Epitope_Rep2 1439.7058306158299 1439.70472993586 52.368 2 -1.2164802552405118 0.3648406820102401 1.0 ['ENSG00000262919|ENST00000576892|CCNQ', 'nc|ENSG00000262919|Q8N1B3-2|CCNQ'] 23181 16624 EVPPGPLPEAV True PC9_epitope_Rep6 1103.5862755634298 1103.5851699358602 76.409 2 -1.2164999877057943 0.3648406820102401 1.0 ['ENSG00000105329|ENST00000221930|TGFB1'] 84391 6233 QGEGEEAMKDM True NCI_RA007_Epitope_Rep3 1223.47983854255 1223.4781949037902 31.521 3 -1.216507886641059 0.36484857522772746 1.0 ['ENSG00000151320|ENST00000280979|AKAP6', 'AKAP6|p.V325Gfs*18|1|0.11|ENSG00000151320|chr14:32545621-32545622|-/G|frameshift_variant', 'nc|ENSG00000151320|Q13023-2|AKAP6', 'ENST00000556037.1_1_14:32902699-32903038:+|nuORF', 'ENST00000554449.1_1_14:32902699-32907897:+|nuORF'] 19177 7836 ELKGGKAYAK True NCI_RA007_Epitope_Rep1 1063.6025943339098 1063.6014899358602 34.471 2 -1.2165194152210912 0.3648564682490369 1.0 ['nc|ENSG00000162636|Q5T8I3-2|EEIG2', 'ENSG00000162636|ENST00000370035|EEIG2'] 123856 8838 VIYPYLLPFIS True H1975_Epitope_Rep1 1323.74786158527 1323.7467699358601 38.919 2 -1.2165657694679386 0.3648643610741758 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1', 'nc|ENSG00000198862|O94822-2|LTN1'] 26460 18702 FINWGNLN True PC9_epitope_Rep1 976.4766655448 976.47556993586 76.727 2 -1.2165902231543437 0.3648722537031514 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 124668 25387 VLILILCLKV True PC9_epitope_Rep1 1125.75592417117 1125.75537496793 102.61 1 -1.2166567090720246 0.3648925726641234 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 13593 10451 DPRFYQIPS True PC9_epitope_Rep5 1121.5505587610498 1121.54946993586 45.186 2 -1.2166885733945798 0.36491171390583643 1.0 ['nc|ENSG00000152457|Q96SD1-2|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-3|DCLRE1C', 'ENSG00000152457|ENST00000378278|DCLRE1C', 'nc|ENSG00000152457|Q96SD1-4|DCLRE1C'] 58222 17601 LESTPPPHVM True PC9_epitope_Rep1 1106.5430308524599 1106.54192993586 72.494 2 -1.216712016858822 0.36491171390583643 1.0 ['CON__Q9TRI1', 'ENSG00000151655|ENST00000358415|ITIH2'] 36033 15611 GVDQKSGY True PC9_epitope_Rep6 852.39774651776 852.39664993586 72.253 2 -1.2167293477570993 0.36491171390583643 1.0 ['chr16:15114571-15123291|257|38.4|0.0|21.87|-|2|PKD1P6-NPIPP1,None|1'] 39659 13049 HPSLLLTLVY True PC9_epitope_Rep1 1154.66994561774 1154.6683049037902 55.061 3 -1.2167494251698787 0.36491171390583643 1.0 ['ENST00000263150.8_1_10:1142124-1149563:+|nuORF'] 124670 24448 VLILILCLKV True PC9_epitope_Rep4 1125.75592417117 1125.75537496793 102.52 1 -1.2167685169919853 0.364919605357986 1.0 ['ENST00000251527.9_1_7:158524237-158524429:-|nuORF'] 48106 25405 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 104.33 3 -1.2169192112719616 0.36496477341915284 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 125701 19916 VNDLPPPPLS True PC9_epitope_Rep3 1047.5600608155898 1047.5589699358602 81.848 2 -1.2169613465452696 0.36497266401590456 1.0 ['TBX4|p.D409N|1|0.25|ENSG00000121075|chr17:61483103-61483103|G/A|missense_variant'] 130080 19035 VTQLLRELT True PC9_epitope_Rep3 1071.62880908175 1071.6277099358601 78.439 2 -1.2171392242291843 0.3650302555882755 1.0 ['nc|ENSG00000095261|Q16401-2|PSMD5', 'ENSG00000095261|ENST00000210313|PSMD5'] 52697 18191 KQIKQRERKNN True NCI_RA007_Epitope_Rep5 1440.8273427308397 1440.82624993586 76.781 2 -1.2171541443471952 0.36503360958214776 1.0 ['RABGAP1-TTLL11|1|fusion', 'RABGAP1-TTLL11|2|fusion', 'nc|ENSG00000188394|Q9Y3P9-3|RABGAP1', 'nc|ENSG00000188394|Q9Y3P9-2|RABGAP1', 'ENSG00000011454|ENST00000373647|RABGAP1'] 20073 11985 ENFPVGPG True H1975_Epitope_Rep1 815.3813681776298 815.3808149679301 51.107 1 -1.2171604192039351 0.36503360958214776 1.0 ['ENST00000495550.5_1_1:197704780-197743705:-|nuORF', 'ENST00000468589.5_1_1:197704780-197744549:-|nuORF'] 99546 7528 SLFAEQNK True NCI_RA007_Epitope_Rep1 935.4712458111901 935.47014993586 33.274 2 -1.2172099722822864 0.36505392376124446 1.0 ['KCNU1|p.V501A|1|0.08|ENSG00000215262|chr8:36836929-36836929|T/C|missense_variant'] 3735 5610 AGSVIYDGK True NCI_RA007_Epitope_Rep2 908.4603467743199 908.45924993586 26.437 2 -1.217325745360907 0.36505727704197005 1.0 ['PKHD1L1|p.P1445A|1|0.18|ENSG00000205038|chr8:109442135-109442135|C/G|missense_variant'] 58088 15862 LERRPKVKH True PC9_epitope_Rep5 1161.70945944429 1161.70780490379 66.004 3 -1.217341071118023 0.36505727704197005 1.0 ['nc|nan|Q8N4C9-2|C17orf78', 'ENSG00000278505|ENST00000615133|C17orf78'] 14488 22255 DTVHKEEKRSK True PC9_epitope_Rep1 1355.7157265931899 1355.71408490379 90.421 3 -1.2174809188287903 0.3650775901698411 1.0 ['ENSG00000111845|ENST00000379568|PAK1IP1'] 37647 24719 HAEAFLVRWP True PC9_epitope_Rep3 1224.6403768249597 1224.63874490379 100.45 3 -1.2175363890343114 0.3650933667954627 1.0 ['ENST00000310389.5_1_5:175798967-175799084:+|nuORF'] 52166 12527 KLWRPTVGER True H1975_Epitope_Rep1 1240.7040397106798 1240.70294993586 53.228 2 -1.217563904111104 0.3650933667954627 1.0 ['ENSG00000153292|ENST00000371253|ADGRF1'] 117920 8115 VAQLPLSLK True NCI_RA007_Epitope_Rep2 967.60661708519 967.60552993586 36.198 2 -1.2176893237128545 0.36511367871785316 1.0 ['ENSG00000221890|ENST00000333039|NPTXR'] 122692 19261 VGTTKGKRK True H1975_Epitope_Rep3 973.6032630402499 973.60216993586 80.761 2 -1.2179608578030936 0.3651961088817383 1.0 ['nc|ENSG00000112419|O75167-5|PHACTR2', 'nc|ENSG00000112419|O75167-2|PHACTR2', 'nc|ENSG00000112419|O75167|PHACTR2', 'ENSG00000112419|ENST00000440869|PHACTR2'] 19378 16902 ELNPQWGE True PC9_epitope_Rep4 971.4348603024699 971.43376993586 72.998 2 -1.218102647498202 0.3652243052190874 1.0 ['nc|ENSG00000139641|Q9BSJ8-2|ESYT1', 'ENSG00000139641|ENST00000394048|ESYT1'] 64068 7254 LQDSWLM[Oxidation]QAVL True NCI_RA007_Epitope_Rep1 1318.6591236143001 1318.6580299358602 32.207 2 -1.2181514943550842 0.3652243052190874 1.0 ['ENST00000481262.6_1_15:40705272-40727929:+|nuORF'] 60000 20045 LHQLERETL True PC9_epitope_Rep4 1137.61422164677 1137.6131299358601 85.24 2 -1.21820776299131 0.3652355396541443 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 122331 11943 VGRYLTLAI True NCI_RA007_Epitope_Rep3 1004.6018660579199 1004.60076993586 54.103 2 -1.2182316005125 0.3652355396541443 1.0 ['ENSG00000174136|ENST00000513185|RGMB'] 112345 24942 TMRPYIQEQ True PC9_epitope_Rep1 1164.5597435457598 1164.55810490379 100.85 3 -1.2182698345542984 0.3652355396541443 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 79730 10034 PHRPGNGR True H1975_Epitope_Rep3 889.4630811693299 889.46198993586 43.631 2 -1.2183104979070367 0.3652546583850932 1.0 ['ENST00000302904.8_1_17:42294008-42298982:-|nuORF', 'ENST00000526094.5_1_17:42294008-42295682:-|nuORF', 'ENST00000343638.9_1_17:42294008-42298176:-|nuORF', 'ENST00000393606.7_1_17:42294008-42297052:-|nuORF'] 133771 25586 WLMVKIFL True PC9_epitope_Rep1 1048.61434531792 1048.6137749679299 103.43 1 -1.2183790723761427 0.3652546583850932 1.0 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5'] 140259 12613 YWYNYEILKKW True PC9_epitope_Rep5 1604.8027506924395 1604.8011149037898 53.518 3 -1.2183900122350824 0.3652546583850932 1.0 ['ENSG00000075303|ENST00000341119|SLC25A40'] 81466 25511 PQLPPALAL True PC9_epitope_Rep3 918.5538532363399 918.5533049679301 103.59 1 -1.218390499271164 0.3652546583850932 1.0 ['ENST00000560821.1_1_15:91352032-91358506:+|nuORF'] 121747 8590 VGLSYEDW True H1975_Epitope_Rep3 967.4287122928699 967.42760993586 38.032 2 -1.2184170141813397 0.3652601637124722 1.0 ['nc|ENSG00000155974|Q9Y3R0-3|GRIP1', 'nc|ENSG00000155974|Q9Y3R0-2|GRIP1', 'ENSG00000155974|ENST00000359742|GRIP1'] 80851 19219 PLVDTHPSPS True NCI_RA007_Epitope_Rep5 1048.5189242796 1048.5178299358602 80.79 2 -1.218455698698025 0.3652601637124722 1.0 ['ENST00000479202.5_1_21:46306285-46309037:-|nuORF'] 10867 8002 DALQQIWEIAR True H1975_Epitope_Rep1 1341.70409928033 1341.70246490379 35.723 3 -1.2184720248567573 0.3652601637124722 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7668832-7673976:+|nuORF'] 110698 6653 TIYYGEQR True NCI_RA007_Epitope_Rep5 1028.4927095317598 1028.4916099358602 32.26 2 -1.218473605182553 0.3652601637124722 1.0 ['ENSG00000127083|ENST00000375550|OMD'] 130568 12058 VTYSPLFWK True PC9_epitope_Rep1 1139.6015317047497 1139.6004299358601 51.24 2 -1.2185290540009066 0.3652601637124722 1.0 ['ENST00000316881.8_1_17:54968766-54968946:-|nuORF'] 78337 6308 PASYNKEE True H1975_Epitope_Rep2 936.4188758851599 936.4183249679301 29.2 1 -1.218544425752814 0.3652601637124722 1.0 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 99426 8132 SLEGSRWP True PC9_epitope_Rep1 930.45593010022 930.45482993586 36.108 2 -1.2185616359605576 0.3652601637124722 1.0 ['ENSG00000183397|ENST00000329493|TEKTIP1'] 100310 16837 SLLYMLEKCL True PC9_epitope_Rep5 1211.62940332871 1211.62774490379 69.772 3 -1.2186343646191324 0.3652635109118235 1.0 ['ENSG00000165553|ENST00000298352|NGB'] 96012 12486 SEAGGQHPRDP True H1975_Epitope_Rep2 1149.51629851065 1149.5152099358602 53.118 2 -1.218683623121894 0.3652635109118235 1.0 ['ENST00000381781.2_1_19:4891229-4891436:-|nuORF'] 15397 5458 EALRSRMWLS True NCI_RA007_Epitope_Rep3 1247.64447622923 1247.6428349037901 28.479 3 -1.2187404834673088 0.3652838156750714 1.0 ['ENST00000482270.5_1_22:31668491-31671520:+|nuORF'] 23305 18878 EVSNTFKNNI True PC9_epitope_Rep3 1164.5775017848798 1164.57640993586 77.838 2 -1.2187646828235068 0.3653041199339221 1.0 ['ENST00000531513.5_1_11:11964592-11970195:+|nuORF'] 5144 9805 ALNKHQHREDH True PC9_epitope_Rep5 1383.67559311671 1383.67393490379 42.682 3 -1.2187961482189245 0.36530746587507607 1.0 ['ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF', 'ENST00000579209.1_1_17:62758032-62758825:-|nuORF'] 79825 14018 PIEFNHRPLL True H1975_Epitope_Rep3 1234.6822416369398 1234.68114993586 59.241 2 -1.2188033671639193 0.36530746587507607 1.0 ['ENSG00000185972|ENST00000335119|CCIN'] 84130 7287 QEQNEKIFAPR True H1975_Epitope_Rep1 1358.69426287262 1358.6931699358602 33.042 2 -1.2188623300736627 0.3653141572587156 1.0 ['ENSG00000155265|ENST00000370602|GOLGA7B'] 118308 18978 VDDKTIIRVP True PC9_epitope_Rep2 1154.6659228664598 1154.66482993586 78.365 2 -1.2188813983545517 0.3653141572587156 1.0 ['nc|ENSG00000258597|P20848|SERPINA2'] 91973 24454 RPQPLRNRR True NCI_RA007_Epitope_Rep4 1191.70610539935 1191.70444490379 106.15 3 -1.2188874770326545 0.3653141572587156 1.0 ['ENST00000549469.1_1_2:176973927-176983694:+|nuORF'] 126017 7669 VPALTLAP True NCI_RA007_Epitope_Rep4 780.47454028648 780.47344993586 36.157 2 -1.2189081769901688 0.3653141572587156 1.0 ['nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 140410 16457 YYFCRWYRNRK True NCI_RA007_Epitope_Rep2 1653.7986854548496 1653.79758993586 68.742 2 -1.2189898469045755 0.36532203979234457 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 101977 15115 SPMYFFLRNLY True PC9_epitope_Rep5 1449.7114931598899 1449.7103899358601 63.145 2 -1.219147409281294 0.3653423415591351 1.0 ['OR10A2|p.S54Y|1|0.15|ENSG00000170790|chr11:6869915-6869915|C/A|missense_variant'] 35689 19732 GTPHYYRRK True H1975_Epitope_Rep3 1176.6152247062798 1176.61357490379 82.628 3 -1.2191855374986198 0.3653705244594578 1.0 ['ENST00000372004.7_1_20:46256675-46256735:+|nuORF'] 42719 10094 IEYRLHEMDRQ True NCI_RA007_Epitope_Rep1 1488.7143466942 1488.7132499358602 43.273 2 -1.2191859377687575 0.3653705244594578 1.0 ['ENSG00000103657|ENST00000443617|HERC1'] 84216 6682 QETVVTSEPYR True H1975_Epitope_Rep1 1307.6357449369898 1307.6346499358601 30.755 2 -1.2192224922392056 0.365390824867738 1.0 ['ENSG00000166068|ENST00000299084|SPRED1'] 26898 6757 FLFWLQIWAKR True H1975_Epitope_Rep1 1506.8499756683798 1506.84832490379 31.03 3 -1.2193030582778428 0.36539751136278964 1.0 ['ENST00000489266.5_1_10:123730488-123733548:-|nuORF'] 88836 4159 RDWSWGGA True PC9_epitope_Rep3 933.4093142609698 933.40820993586 21.116 2 -1.219329229616318 0.36539751136278964 1.0 ['ENST00000557815.1_1_15:70350468-70350999:-|nuORF'] 15510 10803 EAQVELLLHRQ True H1975_Epitope_Rep3 1334.73064838134 1334.7295499358602 46.633 2 -1.2193317395972476 0.36539751136278964 1.0 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 53285 13985 KTKGAGGG True H1975_Epitope_Rep3 674.3711378470998 674.3705849679301 59.112 1 -1.2193374465208557 0.36539751136278964 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 12072 13211 DIENVQHVI True PC9_epitope_Rep3 1065.54547338061 1065.54436993586 55.851 2 -1.2193606070918321 0.3654256904430757 1.0 ['nc|ENSG00000152670|Q9NQI0-3|DDX4', 'nc|ENSG00000152670|Q9NQI0-2|DDX4', 'nc|ENSG00000152670|Q9NQI0-4|DDX4', 'ENSG00000152670|ENST00000505374|DDX4'] 66746 7461 LSTSRRHRRRW True H1975_Epitope_Rep1 1509.85014386409 1509.84850490379 33.696 3 -1.2193879473227873 0.3654256904430757 1.0 ['ENST00000263864.9_1_2:85808699-85808759:+|nuORF'] 46861 11924 IVGFVPRK True PC9_epitope_Rep1 914.5701720068199 914.5690699358599 50.731 2 -1.21940291546509 0.3654335705149698 1.0 ['ENSG00000162694|ENST00000370114|EXTL2'] 13592 23294 DPRFRQYTY True PC9_epitope_Rep4 1244.5938205553598 1244.59272993586 97.854 2 -1.2194165456901176 0.36544145039115855 1.0 ['nc|ENSG00000004139|Q6SZW1-2|SARM1', 'ENSG00000004139|ENST00000585482|SARM1', 'ENST00000379061.8_1_17:26708312-26722930:+|nuORF'] 43224 15689 IGWNNKRTL True PC9_epitope_Rep1 1100.60907669668 1100.6079699358602 65.17 2 -1.2195500598577997 0.36548658280662105 1.0 ['ENST00000329293.3_1_11:7506930-7507047:+|nuORF'] 59626 4544 LGSISPPK True NCI_RA007_Epitope_Rep5 797.46470387877 797.46360993586 24.135 2 -1.2196026409163254 0.3654978021705118 1.0 ['ENST00000368357.7_1_6:126249952-126250054:+|nuORF'] 68249 11151 LTRDETNYGIP True PC9_epitope_Rep1 1277.62518025329 1277.6240899358602 47.776 2 -1.219615319324833 0.3654978021705118 1.0 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 71255 18213 MGFPAVCA True NCI_RA007_Epitope_Rep4 794.3455173462199 794.34440993586 78.808 2 -1.2196231902366435 0.3654978021705118 1.0 ['ENSG00000173653|ENST00000309657|RCE1', 'ENST00000533277.5_1_11:66613305-66613563:+|nuORF'] 36199 12073 GVFSNTQRFL True NCI_RA007_Epitope_Rep2 1167.6036569630699 1167.60254993586 51.553 2 -1.2196863994468203 0.3655293153542427 1.0 ['nc|ENSG00000145832|Q6ZT89-3|SLC25A48', 'nc|ENSG00000145832|Q6ZT89-2|SLC25A48', 'ENSG00000145832|ENST00000681962|SLC25A48'] 6516 16003 APVAAAALA True NCI_RA007_Epitope_Rep2 753.43848913093 753.43738993586 66.965 2 -1.219716953617469 0.3655293153542427 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 16097 11833 EEDWEVFDPY True NCI_RA007_Epitope_Rep2 1327.52446315251 1327.52336993586 50.629 2 -1.2197275179338694 0.3655293153542427 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 4335 6557 AINLSTAK True NCI_RA007_Epitope_Rep2 816.4705175352 816.46942993586 30.118 2 -1.2197882068918362 0.3655293153542427 1.0 ['ENSG00000119737|ENST00000394705|GPR75'] 36612 17778 GVLLAKMKHP True H1975_Epitope_Rep2 1092.6477707045199 1092.64666993586 73.704 2 -1.219817742243741 0.36556202585083003 1.0 ['NEK3|p.A51G|2|0.26|ENSG00000136098|chr13:52154139-52154139|G/C|missense_variant'] 49283 24584 KHKEKIKQKEK True PC9_epitope_Rep4 1422.8670822845 1422.8659899358602 103.05 2 -1.21986012799708 0.36556990315371246 1.0 ['nc|ENSG00000101745|Q6UB98-2|ANKRD12', 'ENSG00000101745|ENST00000262126|ANKRD12'] 16817 12380 EFNELLSKYQ True H1975_Epitope_Rep3 1269.62411762413 1269.6230299358601 52.806 2 -1.220001928766275 0.3655901962975379 1.0 ['nc|ENSG00000082641|Q14494-2|NFE2L1', 'ENSG00000082641|ENST00000362042|NFE2L1'] 138438 7966 YREKEEEEQRR True PC9_epitope_Rep1 1550.74373224618 1550.74207490379 35.463 3 -1.2200797391063851 0.3656059496169748 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 98588 6919 SINERMAHQQR True NCI_RA007_Epitope_Rep1 1368.66806520812 1368.6669699358602 30.917 2 -1.2200929650778511 0.3656059496169748 1.0 ['ENSG00000141431|ENST00000269197|ASXL3'] 57997 8917 LEQVTKVL True NCI_RA007_Epitope_Rep4 928.5593325396 928.55822993586 41.13 2 -1.2201906838033945 0.36562624155740964 1.0 ['ENSG00000086544|ENST00000263370|ITPKC'] 133665 19538 WKTLKMLNFRL True NCI_RA007_Epitope_Rep3 1448.8326113520798 1448.8309649037901 85.232 3 -1.2202138681541386 0.3656419933950786 1.0 ['ENST00000394961.6_1_4:95155160-95155232:+|nuORF'] 65207 8438 LSDYYYHADF True H1975_Epitope_Rep2 1292.5349682665599 1292.5338699358601 37.407 2 -1.2202249977610649 0.3656419933950786 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8', 'ENST00000548535.1_1_12:76779917-76783618:-|nuORF'] 128220 21255 VRVKGGGH True PC9_epitope_Rep3 808.4667695674398 808.46566993586 87.052 2 -1.2202816026063257 0.3656622841322458 1.0 ['ENSG00000105193|ENST00000251453|RPS16', 'RPS16|p.R69C|1|0.09|ENSG00000105193|chr19:39433707-39433707|G/A|missense_variant'] 68374 7905 LTSNRPEPIP True NCI_RA007_Epitope_Rep3 1122.6033226099 1122.6022299358601 38.206 2 -1.2204042844001493 0.3657446491532999 1.0 ['ENST00000452157.5_1_5:56218957-56234137:-|nuORF', 'nc|ENSG00000155545|Q7Z3K6-4|MIER3', 'nc|ENSG00000155545|Q7Z3K6-3|MIER3', 'ENSG00000155545|ENST00000381199|MIER3', 'nc|ENSG00000155545|Q7Z3K6-2|MIER3'] 90049 13929 RGGQGHGE True PC9_epitope_Rep3 796.3576130412799 796.35650993586 58.656 2 -1.2205817088110216 0.365747982619491 1.0 ['ENSG00000115297|ENST00000233638|TLX2'] 61825 9174 LLLAACAF True PC9_epitope_Rep6 820.45169666692 820.45058993586 45.415 2 -1.2206305095128793 0.365747982619491 1.0 ['ENST00000354670.8_1_15:40383078-40383165:-|nuORF'] 114526 6376 TSGQTRVI True PC9_epitope_Rep4 860.4715801643599 860.47048993586 31.611 2 -1.2206987144641919 0.365751315920151 1.0 ['ENST00000339924.12_2_19:55344219-55358662:+|nuORF'] 11998 4488 DHYYWYTLCIF True PC9_epitope_Rep5 1522.6591232338599 1522.65748490379 22.33 3 -1.220789693642851 0.365751315920151 1.0 ['ATP13A2|p.A260T|1|0.45|ENSG00000159363|chr1:17000462-17000462|C/T|missense_variant'] 85887 8442 QNKNKLGAL True PC9_epitope_Rep6 984.5716285587998 984.57052993586 42.167 2 -1.2208710360332449 0.36575918960187703 1.0 ['ENST00000433480.2_1_13:48876566-48877550:-|nuORF'] 1063 9805 AEALNVFQQAA True H1975_Epitope_Rep3 1160.58258716532 1160.5814899358602 42.741 2 -1.2209058297564652 0.3657749363788716 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2', 'ENST00000592222.5_1_19:1115804-1132196:-|nuORF'] 125700 21241 VNDLLQENEQL True H1975_Epitope_Rep2 1313.64630962069 1313.64520993586 87.909 2 -1.220908656260688 0.3657749363788716 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 40080 3451 HRCAAGFH True PC9_epitope_Rep6 897.4027894118899 897.40168993586 19.452 2 -1.2209970509083523 0.36579522319876856 1.0 ['ENST00000304771.7_1_11:75378785-75379403:-|nuORF'] 38546 5729 HHESHAKVMMY True H1975_Epitope_Rep2 1368.60671082152 1368.60560993586 27.035 2 -1.2210817475167435 0.3658403366560324 1.0 ['ENST00000607532.5_1_6:13307806-13327130:-|nuORF', 'nc|ENSG00000145979|Q9P0N9-4|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-2|TBC1D7', 'ENSG00000145979|ENST00000379300|TBC1D7', 'ENST00000606214.5_1_6:13321275-13325348:-|nuORF'] 87911 5019 QVNEKSLIRQY True NCI_RA007_Epitope_Rep5 1376.74121306504 1376.7401099358601 26.008 2 -1.2212175917329722 0.3658469979270367 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 112650 6878 TPEVIWRNGVL True PC9_epitope_Rep3 1282.70337100434 1282.70173490379 31.472 3 -1.221220560699804 0.3658469979270367 1.0 ['ENST00000511805.5_1_4:3344715-3380011:+|nuORF'] 42575 17816 IESQNPLASP True PC9_epitope_Rep5 1054.5294889632999 1054.52838993586 73.548 2 -1.2212769134624093 0.3658469979270367 1.0 ['ENSG00000108256|ENST00000225388|NUFIP2'] 133424 8762 WFWQDRFWLPP True PC9_epitope_Rep3 1576.7615545867998 1576.7599049037901 38.656 3 -1.2212778508293591 0.3658469979270367 1.0 ['ENST00000557925.1_1_19:8315741-8320784:+|nuORF', 'ENSG00000090661|ENST00000251363|CERS4'] 20135 20925 ENLLLEGKA True PC9_epitope_Rep4 985.54441075145 985.54330993586 88.647 2 -1.221368275815738 0.3658581996921702 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'ENST00000489156.1_1_6:152599163-152623219:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 90959 24429 RLGRHRGRLE True H1975_Epitope_Rep1 1248.72756911992 1248.72592490379 101.27 3 -1.22140117590338 0.3658581996921702 1.0 ['ENST00000477931.5_1_20:57464155-57485881:+|nuORF'] 46643 8131 ITVEEIIYP True PC9_epitope_Rep2 1075.58012755383 1075.57902993586 36.633 2 -1.2214612910142637 0.3658581996921702 1.0 ['nc|ENSG00000180773|Q6YBV0-2|SLC36A4', 'ENSG00000180773|ENST00000326402|SLC36A4', 'ENST00000527503.1_1_11:92881705-92887463:-|nuORF'] 70647 11636 MCIMCRFVT True PC9_epitope_Rep3 1102.4795853742198 1102.4784899358601 49.774 2 -1.2215485509136734 0.3658908955501769 1.0 ['chr5:90822097-90965415|264|32.48|0.18|7.5|+|2|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|2'] 82005 8159 PSSTEHPVL True PC9_epitope_Rep4 965.4818104948898 965.48070993586 38.838 2 -1.2217105615127264 0.3659054238550329 1.0 ['ENST00000570101.5_1_16:58700792-58701185:-|nuORF'] 67925 11503 LTLETEDMLP True PC9_epitope_Rep1 1160.56349151352 1160.56183490379 49.125 3 -1.221713714944189 0.3659054238550329 1.0 ['ENSG00000166069|ENST00000319669|TMCO5A'] 128018 23365 VRRARRRASP True PC9_epitope_Rep1 1223.7435535372297 1223.7418949037901 94.656 3 -1.2217282700638605 0.3659054238550329 1.0 ['ENST00000287169.7_1_11:57435394-57435445:+|nuORF'] 49389 23524 KIILEFKEKCK True PC9_epitope_Rep3 1377.80539354473 1377.80374490379 95.765 3 -1.221738678816878 0.3659054238550329 1.0 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 81021 12210 PNTVWTIGYWL True H1975_Epitope_Rep3 1348.6815729306 1348.6804699358602 52.138 2 -1.2217494235947084 0.3659054238550329 1.0 ['ENSG00000181072|ENST00000680005|CHRM2'] 108877 16218 TERSKQKARR True PC9_epitope_Rep3 1258.7218150331398 1258.7207099358602 67.519 2 -1.2218993900005914 0.36592570527857415 1.0 ['nc|ENSG00000182196|Q66PJ3-7|ARL6IP4', 'ENSG00000182196|ENST00000315580|ARL6IP4', 'ENST00000539576.5_1_12:123465834-123466670:+|nuORF', 'nc|ENSG00000182196|Q66PJ3-1|ARL6IP4'] 18324 7306 EIVINESR True NCI_RA007_Epitope_Rep2 958.5083595959 958.50726993586 33.038 2 -1.221943293821236 0.36594598619867946 1.0 ['nc|ENSG00000162374|P26378-3|ELAVL4'] 122307 6345 VGRVGKNA True PC9_epitope_Rep1 799.46643521427 799.46532993586 29.217 2 -1.2220055492653572 0.3659662666153674 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 75570 8381 NQPELETRMST True H1975_Epitope_Rep3 1304.60306490972 1304.60196993586 37.221 2 -1.222067573552273 0.36597413557723335 1.0 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1', 'ENSG00000141446|ENST00000269214|ESCO1', 'ESCO1|p.T344Nfs*4|1|0.24|ENSG00000141446|chr18:21573813-21573814|-/T|frameshift_variant'] 74391 12770 NITKRWLKTH True NCI_RA007_Epitope_Rep2 1295.7462388758297 1295.7451499358601 54.289 2 -1.2220829127378883 0.3659820043437791 1.0 ['ENST00000600076.5_1_19:14628087-14674061:+|nuORF'] 4557 19309 AKVIRSLHGR True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 81.149 2 -1.2221018731330076 0.3659931991362407 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 85670 13466 QLQQQRMQL True PC9_epitope_Rep1 1171.6131761009499 1171.61152490379 56.654 3 -1.222104877372474 0.3659931991362407 1.0 ['KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant', 'KMT2D|p.A3731S|1|0.29|ENSG00000167548|chr12:49033514-49033514|C/A|missense_variant'] 4550 18060 AKVIRSLHGR True NCI_RA007_Epitope_Rep3 1135.69380938015 1135.6927099358602 79.136 2 -1.2221229729861252 0.3659931991362407 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 100746 18672 SLRLIPDDL True PC9_epitope_Rep1 1040.5866099165999 1040.58550993586 76.612 2 -1.2222354423552322 0.36606311818215664 1.0 ['ENSG00000176953|ENST00000320805|NFATC2IP', 'ENST00000565919.1_1_16:28962342-28963698:+|nuORF', 'ENST00000562977.1_1_16:28962332-28970171:+|nuORF', 'ENST00000565752.5_1_16:28962332-28963698:+|nuORF'] 92371 4071 RQQIEYKTL True NCI_RA007_Epitope_Rep3 1177.64552177505 1177.64386490379 22.512 3 -1.2223655058147609 0.3660863846736069 1.0 ['ENSG00000076356|ENST00000367033|PLXNA2'] 114539 20287 TSHQWPKQRE True H1975_Epitope_Rep2 1295.6370823496698 1295.63542490379 84.07 3 -1.2224038280263387 0.3660863846736069 1.0 ['nc|ENSG00000226807|Q6ZUA9|MROH5'] 9212 8486 AVPLVPLT True H1975_Epitope_Rep3 808.50584041476 808.50474993586 37.627 2 -1.2224257543735766 0.3660863846736069 1.0 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 79735 17444 PHRYAYNI True PC9_epitope_Rep5 1032.5141136826799 1032.51300993586 72.098 2 -1.222430550974588 0.3660863846736069 1.0 ['ENST00000481054.5_1_3:183861194-183861371:+|nuORF', 'ENST00000465218.2_1_3:183861194-183862728:+|nuORF'] 79219 14880 PGGFGGPG True H1975_Epitope_Rep1 644.29182489724 644.29127496793 62.47 1 -1.2224580290023446 0.3660863846736069 1.0 ['CON__Q3TTY5'] 31257 16251 GDRDENSFSL True PC9_epitope_Rep5 1138.4890807033 1138.48798993586 67.498 2 -1.2225119374482183 0.3660863846736069 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'nc|ENSG00000078018|P11137-2|MAP2', 'nc|ENSG00000078018|P11137-4|MAP2'] 78577 7759 PDRDPASPL True PC9_epitope_Rep3 966.4770594676199 966.47596993586 34.837 2 -1.2225543397330838 0.3660863846736069 1.0 ['ENSG00000136235|ENST00000258733|GPNMB', 'nc|ENSG00000136235|Q14956|GPNMB', 'ENST00000470994.1_1_7:23309673-23313234:+|nuORF'] 18102 16210 EILEPPKKRT True H1975_Epitope_Rep1 1209.70812203161 1209.70648490379 67.7 3 -1.2225815592815703 0.3660863846736069 1.0 ['ENST00000572240.5_1_16:3078109-3079857:-|nuORF', 'nc|ENSG00000162069|A1A5D9-2|BICDL2', 'ENSG00000162069|ENST00000572449|BICDL2'] 83785 9114 QEEKDKLLK True H1975_Epitope_Rep3 1129.6342883850098 1129.6331899358602 40.046 2 -1.2226200208482416 0.3660863846736069 1.0 ['ENST00000489323.5_1_14:74495895-74513566:+|nuORF'] 128221 19430 VRVKGGGH True PC9_epitope_Rep6 808.4667695674398 808.46566993586 87.398 2 -1.222634563116913 0.3660863846736069 1.0 ['ENSG00000105193|ENST00000251453|RPS16', 'RPS16|p.R69C|1|0.09|ENSG00000105193|chr19:39433707-39433707|G/A|missense_variant'] 129381 19868 VTEESPKPDK True PC9_epitope_Rep1 1128.5662683948397 1128.56516993586 81.24 2 -1.2226347379867115 0.3660863846736069 1.0 ['NCKAP5L|p.K837E|1|0.12|ENSG00000167566|chr12:49795351-49795351|T/C|missense_variant'] 109249 4034 TFWYWNYNYYP True NCI_RA007_Epitope_Rep2 1615.6772158261497 1615.6755749037902 20.329 3 -1.222638642729189 0.3660863846736069 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 58310 10463 LETLNYQMLWQ True NCI_RA007_Epitope_Rep1 1437.69623701857 1437.6951299358602 44.682 2 -1.2226473344539641 0.3660863846736069 1.0 ['ENST00000459737.5_1_14:56078878-56079043:+|nuORF'] 123581 23603 VIKARKLPP True NCI_RA007_Epitope_Rep4 1020.6807850849599 1020.67968993586 102.39 2 -1.2226499473471832 0.3660863846736069 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 53 6583 AAAGRTRGCCP True NCI_RA007_Epitope_Rep1 1061.48586741285 1061.4847699358602 29.619 2 -1.2227230131539764 0.36610211551585087 1.0 ['ENST00000371080.5_1_1:64239838-64474998:+|nuORF'] 139629 18432 YTRVVRRTL True NCI_RA007_Epitope_Rep3 1162.6934750269797 1162.6923699358601 80.685 2 -1.2227246063126045 0.36610211551585087 1.0 ['ENST00000477618.1_1_9:74817496-74842957:+|nuORF', 'nc|ENSG00000119125|Q9Y2T3-2|GDA', 'ENSG00000119125|ENST00000358399|GDA', 'nc|ENSG00000119125|Q9Y2T3-3|GDA'] 16159 5860 EEEREVQV True H1975_Epitope_Rep2 1016.4774533904398 1016.47634993586 27.526 2 -1.222763163385417 0.3661099806442007 1.0 ['ENSG00000101203|ENST00000358894|COL20A1', 'nc|ENSG00000101203|Q9P218-2|COL20A1', 'nc|ENSG00000101203|Q9P218-3|COL20A1', 'ENST00000479501.5_1_20:61926459-61943880:+|nuORF'] 139155 14373 YSRSRQVK True NCI_RA007_Epitope_Rep2 1022.5621265042598 1022.5610299358599 60.574 2 -1.2227990428791176 0.3661178455773788 1.0 ['ENSG00000110427|ENST00000658780|KIAA1549L', 'nc|ENSG00000110427|Q6ZVL6|KIAA1549L'] 17873 10088 EIDAKYQEILK True NCI_RA007_Epitope_Rep1 1348.7238316654 1348.7227299358601 43.249 2 -1.2231510752816885 0.36622303809086737 1.0 ['ENSG00000153487|ENST00000333219|ING1'] 33379 6483 GLESQRALSP True H1975_Epitope_Rep2 1056.55637241748 1056.55526993586 29.853 2 -1.2231583543108686 0.36622303809086737 1.0 ['ENSG00000121068|ENST00000240328|TBX2', 'ENST00000477081.1_1_17:59485297-59485864:+|nuORF'] 11555 5353 DGPNTARK True NCI_RA007_Epitope_Rep5 857.4355290088099 857.43442993586 27.282 2 -1.2231684462231331 0.36622303809086737 1.0 ['USP43|p.S1068Afs*45|1|0.23|ENSG00000154914|chr17:9728815-9728815|C/-|frameshift_variant', 'nc|ENSG00000154914|Q70EL4-4|USP43', 'ENSG00000154914|ENST00000285199|USP43', 'nc|ENSG00000154914|Q70EL4-2|USP43', 'nc|ENSG00000154914|Q70EL4-3|USP43'] 31622 9118 GEGPRERREGP True H1975_Epitope_Rep1 1238.6115958778198 1238.6104899358602 39.976 2 -1.2232129530478024 0.36622303809086737 1.0 ['ENST00000333602.10_1_3:195635568-195635940:-|nuORF'] 22057 5668 ESRRWRPERIP True PC9_epitope_Rep4 1480.8011279829998 1480.79947490379 28.608 3 -1.223246101464492 0.36622303809086737 1.0 ['nc|ENSG00000167302|Q96N21|TEPSIN', 'ENSG00000167302|ENST00000637944|TEPSIN', 'nc|ENSG00000167302|Q96N21-2|TEPSIN'] 11516 6001 DGHSAWTG True PC9_epitope_Rep5 829.3354806143701 829.33438993586 28.078 2 -1.223253501610379 0.36622303809086737 1.0 ['ENST00000509268.1_1_5:82400738-82554497:+|nuORF', 'nc|ENSG00000152422|Q13426-3|XRCC4', 'ENST00000542685.5_1_5:82400738-82606644:+|nuORF', 'ENSG00000152422|ENST00000396027|XRCC4', 'nc|ENSG00000152422|Q13426|XRCC4'] 63487 9307 LPHQHHRAP True NCI_RA007_Epitope_Rep2 1091.57369424747 1091.5725899358602 40.808 2 -1.2232649895635195 0.36622303809086737 1.0 ['ENST00000369390.3_1:120839070-120839154:+|nuORF'] 128499 4821 VSFSPAQK True NCI_RA007_Epitope_Rep3 862.4548674710599 862.45376993586 25.933 2 -1.2232837457631323 0.36622303809086737 1.0 ['ENST00000463171.5_1_3:189681716-189688667:-|nuORF'] 69388 11699 LVQIPIFFFTV True PC9_epitope_Rep5 1322.7638460025798 1322.76274993586 49.996 2 -1.2232863204352107 0.36622303809086737 1.0 ['ENSG00000172209|ENST00000304402|GPR22'] 110640 6035 TIVELFFQE True H1975_Epitope_Rep3 1124.5753765265597 1124.57426993586 28.228 2 -1.223311497489854 0.36622303809086737 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160', 'NUP160|p.V1073Wfs*4|1|0.26|ENSG00000030066|chr11:47797851-47797851|C/-|frameshift_variant'] 116089 12513 TVSGDRIVL True PC9_epitope_Rep5 958.5447451046199 958.54364993586 53.13 2 -1.2233313862945463 0.36622303809086737 1.0 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 54604 6373 LADEKSEK True NCI_RA007_Epitope_Rep1 918.46582607758 918.46472993586 28.815 2 -1.2233842165416606 0.36622303809086737 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 84306 20178 QFGVSFYSIFL True PC9_epitope_Rep3 1306.65977485686 1306.6586699358602 82.871 2 -1.2233890821421756 0.36622303809086737 1.0 ['ENST00000559111.1_1_15:99798356-99798647:+|nuORF'] 39351 5394 HLTSKTPP True PC9_epitope_Rep1 879.48141657207 879.48030993586 25.582 2 -1.2234198604498898 0.36622303809086737 1.0 ['nc|ENSG00000213999|Q02080|MEF2B', 'ENSG00000213999|ENST00000424583|MEF2B'] 78252 20812 PARFLPLPGL True PC9_epitope_Rep1 1079.6491506035097 1079.6480499358602 84.881 2 -1.2234374287792928 0.36622303809086737 1.0 ['ENSG00000105550|ENST00000593756|FGF21'] 122272 20700 VGRRRTSR True PC9_epitope_Rep6 986.5845932843399 986.58404496793 92.385 1 -1.2234600191457645 0.36622303809086737 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 77901 18074 PAHAPSSS True H1975_Epitope_Rep3 752.3453170220802 752.34420993586 75.717 2 -1.2235176274239108 0.36622303809086737 1.0 ['ENSG00000176771|ENST00000409261|NCKAP5'] 122701 9006 VGTVADLF True NCI_RA007_Epitope_Rep3 820.43306939732 820.43196993586 42.522 2 -1.223519885680322 0.36622303809086737 1.0 ['nc|ENSG00000138115|P10632-2|CYP2C8', 'ENST00000526814.5_1_10:96796887-96827187:-|nuORF', 'ENSG00000138115|ENST00000371270|CYP2C8'] 18038 16479 EIINYRDGMG True PC9_epitope_Rep1 1166.53900810118 1166.5379099358602 68.212 2 -1.2235387340306338 0.36622303809086737 1.0 ['nc|ENSG00000171723|Q9NQX3|GPHN', 'ENSG00000171723|ENST00000478722|GPHN', 'GPHN|p.G383Afs*21|1|0.33|ENSG00000171723|chr14:67100864-67100864|G/-|frameshift_variant'] 83438 8673 QDALVLGFDW True H1975_Epitope_Rep3 1162.56587447202 1162.56476993586 38.359 2 -1.223565517527733 0.36622303809086737 1.0 ['ENST00000479978.5_1_22:41601366-41613299:+|nuORF', 'nc|ENSG00000100395|Q969R5-2|L3MBTL2', 'nc|ENSG00000100395|Q969R5-3|L3MBTL2', 'ENST00000466589.5_1_22:41601366-41623356:+|nuORF', 'ENSG00000100395|ENST00000216237|L3MBTL2'] 14413 3963 DTHLWYFVIP True H1975_Epitope_Rep3 1289.6444591458899 1289.64280490379 20.372 3 -1.2236557474309353 0.36622303809086737 1.0 ['ENSG00000146802|ENST00000312814|TMEM168'] 81405 4618 PPVSTEYTYY True H1975_Epitope_Rep3 1218.5444703210999 1218.54336993586 22.885 2 -1.2236576982875076 0.36622303809086737 1.0 ['SECISBP2L|p.A823Qfs*12|1|0.13|ENSG00000138593|chr15:48996524-48996524|A/-|frameshift_variant', 'ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L', 'SECISBP2L|p.P614Hfs*12|1|0.22|ENSG00000138593|chr15:49011754-49011754|G/-|frameshift_variant'] 87610 5977 QTSQVLTAV True PC9_epitope_Rep4 945.5131106231698 945.51200993586 29.937 2 -1.2237067957639771 0.36622303809086737 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 104340 19656 SSETTSIKREP True PC9_epitope_Rep5 1233.62009487285 1233.61843490379 80.663 3 -1.2237162398942965 0.36622303809086737 1.0 ['MUC16|p.N5179S|1|0.24|ENSG00000181143|chr19:8961234-8961234|T/C|missense_variant'] 3375 18677 AGIMLLLRSI True PC9_epitope_Rep5 1085.66308641549 1085.6619899358602 76.861 2 -1.2237371011617744 0.36622303809086737 1.0 ['nc|nan|Q6P1S2-2|C3orf33', 'ENSG00000174928|ENST00000340171|C3orf33'] 108757 11529 TENVWDESW True H1975_Epitope_Rep2 1164.4723680099999 1164.4712699358602 49.406 2 -1.2237539684048455 0.36622303809086737 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3'] 18723 18257 ELDISKNGV True PC9_epitope_Rep1 973.50802524273 973.50692993586 75.015 2 -1.2237546365955299 0.3662308989878944 1.0 ['nc|ENSG00000033122|Q96NW7-2|LRRC7', 'nc|ENSG00000033122|Q96NW7|LRRC7', 'ENSG00000033122|ENST00000651989|LRRC7', 'ENST00000415775.2_1_1:70225872-70503822:+|nuORF', 'LRRC7|p.N814Kfs*21|1|0.12|ENSG00000033122|chr1:70038263-70038264|-/AA|frameshift_variant', 'nc|ENSG00000033122|Q96NW7-3|LRRC7'] 43226 8307 IGWSWERKWEK True NCI_RA007_Epitope_Rep2 1503.7622828627898 1503.76118993586 36.951 2 -1.223802461344492 0.3662387596899225 1.0 ['ENST00000237172.11_1_6:76203231-76203315:-|nuORF'] 57907 20638 LEQKTDTREN True PC9_epitope_Rep1 1232.5996937814398 1232.5985899358602 84.205 2 -1.2238914477219518 0.3662453955772737 1.0 ['ENSG00000011114|ENST00000334746|BTBD7'] 89863 5688 RFLQWTELLDP True NCI_RA007_Epitope_Rep2 1416.7401504358797 1416.73849490379 26.738 3 -1.2239040726590626 0.3662453955772737 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'ENST00000461438.5_1_10:120917240-120925159:-|nuORF'] 101142 14735 SLVNEKNNAL True PC9_epitope_Rep5 1100.58258716532 1100.5814899358602 61.677 2 -1.2239382228000673 0.3662453955772737 1.0 ['ANKRD44|p.I935V|1|0.16|ENSG00000065413|chr2:196995407-196995407|T/C|missense_variant'] 52947 21381 KRKTLPVQEH True H1975_Epitope_Rep2 1234.7146043943799 1234.71295490379 88.467 3 -1.224014385056699 0.3662453955772737 1.0 ['ENST00000260970.7_1_2:170440931-170460199:+|nuORF'] 36135 20614 GVERRRTRPR True PC9_epitope_Rep6 1281.74903284049 1281.7479299358602 92.022 2 -1.2240886939851419 0.3662689750967358 1.0 ['ENST00000308110.8_1_11:65628088-65628496:+|nuORF'] 19285 15645 ELLRLTHVRFY True H1975_Epitope_Rep3 1445.81431843565 1445.8132299358601 65.596 2 -1.2240909676193281 0.3662689750967358 1.0 ['nc|ENSG00000167291|Q8TBP0-3|TBC1D16', 'nc|ENSG00000167291|Q8TBP0-4|TBC1D16', 'nc|ENSG00000167291|Q8TBP0-2|TBC1D16', 'ENSG00000167291|ENST00000310924|TBC1D16'] 97026 22691 SEVTPFPG True PC9_epitope_Rep2 832.3966838885999 832.39558993586 92.775 2 -1.2240919026375983 0.3662689750967358 1.0 ['nc|ENSG00000091140|P09622-2|DLD', 'ENSG00000091140|ENST00000205402|DLD', 'ENST00000451081.5_1_7:107545401-107546727:+|nuORF', 'ENST00000478414.1_1_7:107543952-107546123:+|nuORF'] 133686 5498 WKYLFCMMTSF True H1975_Epitope_Rep2 1455.6389224665897 1455.63782993586 26.161 2 -1.224147256647412 0.3662722920852246 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|106|2|anti-sense'] 13526 8299 DPHLNRWLRL True PC9_epitope_Rep3 1318.72583778442 1318.72420490379 36.895 3 -1.2241605998706162 0.3662722920852246 1.0 ['ENSG00000167487|ENST00000300976|KLHL26'] 26799 22160 FLDVWWEV True H1975_Epitope_Rep2 1092.52803241132 1092.5269299358602 91.587 2 -1.2242641525101732 0.3663128131355722 1.0 ['ENSG00000179409|ENST00000319004|GEMIN4'] 15769 13683 EDETDGEQR True PC9_epitope_Rep1 1077.42106071313 1077.41996993586 57.485 2 -1.2242859516130973 0.3663128131355722 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'CACNA1A|p.A858Rfs*212|1|0.29|ENSG00000141837|chr19:13299072-13299073|GC/-|frameshift_variant'] 71431 22298 MIQRIFLITLD True PC9_epitope_Rep6 1361.77409341645 1361.77298993586 98.74 2 -1.2243854471548101 0.3663454741619852 1.0 ['ENSG00000110344|ENST00000252108|UBE4A', 'nc|ENSG00000110344|Q14139-2|UBE4A'] 10963 14605 DCGFGDGG True NCI_RA007_Epitope_Rep5 726.2279043113399 726.2273549679301 62.846 1 -1.2245145639223183 0.3663859918897804 1.0 ['ENSG00000108582|ENST00000225719|CPD'] 79224 14238 PGGGGGGC True NCI_RA007_Epitope_Rep4 560.2012956406801 560.2007449679301 62.048 1 -1.2245754358919443 0.3663859918897804 1.0 ['ENSG00000169991|ENST00000455833|IFFO2'] 84348 13719 QFVQWFKKFFD True H1975_Epitope_Rep1 1518.7659712608995 1518.7648699358601 57.91 2 -1.2246527188335707 0.36640170632804653 1.0 ['MAPRE1|p.E106Q|1|0.3|ENSG00000101367|chr20:32836682-32836682|G/C|missense_variant'] 66107 6508 LSNRYMQVWFS True NCI_RA007_Epitope_Rep1 1429.68125566077 1429.67959490379 29.33 3 -1.2246586987925319 0.36640170632804653 1.0 ['ENST00000559374.1_1_15:91454636-91455656:+|nuORF', 'nc|ENSG00000196547|P49641-2|MAN2A2', 'nc|ENSG00000196547|P49641-1|MAN2A2', 'ENSG00000196547|ENST00000559717|MAN2A2'] 6971 21549 AQPIFGAIA True PC9_epitope_Rep3 886.4912529797798 886.49014993586 88.183 2 -1.2246747222690033 0.36640501965452676 1.0 ['ENST00000361716.7_1_12:6572127-6572325:-|nuORF'] 14185 7160 DSSNYEQESKI True NCI_RA007_Epitope_Rep3 1298.5626395663796 1298.56154993586 35.281 2 -1.2247074723880969 0.36640501965452676 1.0 ['ENSG00000198822|ENST00000361669|GRM3', 'nc|ENSG00000198822|Q14832-2|GRM3'] 90446 22062 RIRKHLGLTS True PC9_epitope_Rep6 1179.7200241279897 1179.71836490379 97.795 3 -1.224724308105854 0.36641287634541936 1.0 ['ENST00000466122.5_1_21:42622694-42622781:+|nuORF'] 26714 13617 FLDGDHGPV True PC9_epitope_Rep1 955.43994568291 955.43884993586 57.233 2 -1.2248269802045255 0.3664331328662657 1.0 ['nc|ENSG00000223519|B7ZC32|KIF28P'] 59471 7759 LGNTYTVSI True PC9_epitope_Rep3 966.5022115863001 966.50110993586 34.837 2 -1.2248531778244722 0.36643644524904834 1.0 ['nc|ENSG00000197121|Q75T13-2|PGAP1', 'ENSG00000197121|ENST00000354764|PGAP1', 'ENST00000459896.5_1_2:197703237-197707512:-|nuORF'] 15131 7186 EAEKKEEKEKK True H1975_Epitope_Rep1 1374.7354589782597 1374.73436993586 32.66 2 -1.2248678929687211 0.36643644524904834 1.0 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 6518 21641 APVAAAALA True PC9_epitope_Rep1 753.43848913093 753.43738993586 88.069 2 -1.2249416168742826 0.3664443011605992 1.0 ['ENSG00000176396|ENST00000390658|EID2'] 11145 6412 DEFRSFFQFLN True H1975_Epitope_Rep1 1448.6724647988797 1448.6708249037902 29.722 3 -1.2249851696900373 0.366460012399256 1.0 ['ENSG00000155970|ENST00000318063|MICU3'] 1791 7454 AEIAKM[Oxidation]LWSF True H1975_Epitope_Rep3 1210.6056314894597 1210.60452993586 33.65 2 -1.2249864805604096 0.366460012399256 1.0 ['ENST00000370783.7_1_X:134033540-134049286:-|nuORF'] 106344 20904 SVSFSPLFIFQ True NCI_RA007_Epitope_Rep3 1270.65977485686 1270.6586699358602 91.013 2 -1.2250155178189788 0.3664711790014011 1.0 ['ENST00000548283.6_1_12:112373822-112373960:-|nuORF'] 53719 17616 KYEDLYAFSYN True H1975_Epitope_Rep3 1411.6295969273897 1411.6284899358602 73.597 2 -1.2250323044168643 0.3664711790014011 1.0 ['ENSG00000139505|ENST00000381801|MTMR6', 'MTMR6|p.E402Gfs*15|1|0.23|ENSG00000139505|chr13:25253910-25253911|-/A|frameshift_variant', 'nc|ENSG00000139505|Q9Y217-2|MTMR6'] 120245 6994 VFPAAPGP True NCI_RA007_Epitope_Rep5 754.4013753462199 754.40026993586 33.583 2 -1.2250557987563657 0.3664711790014011 1.0 ['ENST00000252445.7_1_19:11664136-11664256:-|nuORF'] 86466 24337 QQSPAFFL True PC9_epitope_Rep3 936.4705175351999 936.46942993586 98.926 2 -1.2251511700731612 0.3664992870869754 1.0 ['ENST00000521988.5_2_8:93898270-93898507:-|nuORF'] 19111 7241 ELIEEFGQP True PC9_epitope_Rep1 1060.5076908895599 1060.5065899358601 32.666 2 -1.2251588095919357 0.3664992870869754 1.0 ['ENST00000481600.5_1_10:127417653-127452038:+|nuORF', 'nc|ENSG00000107938|Q3B7T1-5|EDRF1', 'ENSG00000107938|ENST00000356792|EDRF1', 'ENST00000419769.6_1_10:127430814-127452038:+|nuORF'] 31135 9195 GCSHGPRG True H1975_Epitope_Rep3 769.32895576529 769.32840496793 40.361 1 -1.2251896509772076 0.36651499559864614 1.0 ['ENST00000564946.5_1_16:30663032-30664184:+|nuORF', 'ENST00000565410.5_1_16:30662428-30664184:+|nuORF', 'ENST00000563399.5_1_16:30662065-30664184:+|nuORF', 'ENST00000300835.8_2_16:30662428-30664408:+|nuORF', 'ENST00000568754.5_2_16:30662065-30664408:+|nuORF'] 19239 7436 ELLCQFNPTQV True H1975_Epitope_Rep1 1290.62782310558 1290.62672993586 33.606 2 -1.2251922591737558 0.36651499559864614 1.0 ['ENST00000492449.5_1_3:184603882-184769810:+|nuORF', 'nc|ENSG00000156931|Q8N3P4-2|VPS8', 'nc|ENSG00000156931|Q8N3P4-3|VPS8', 'ENSG00000156931|ENST00000625842|VPS8'] 64303 7462 LQLYKLLEIPD True NCI_RA007_Epitope_Rep2 1343.7700535818299 1343.76894993586 33.652 2 -1.2252078810212483 0.3665183054587833 1.0 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 63524 7975 LPKLFFYFWRE True NCI_RA007_Epitope_Rep1 1544.8180068337595 1544.81635490379 35.014 3 -1.225241164963143 0.3665183054587833 1.0 ['ENST00000274054.2_1_4:164087931-164087976:-|nuORF'] 27915 17128 FQLSDWSPW True NCI_RA007_Epitope_Rep4 1164.5240096600398 1164.52237490379 74.2 3 -1.225332525586789 0.3665385569055294 1.0 ['THSD7A|p.C1287F|1|0.29|ENSG00000005108|chr7:11407362-11407362|C/A|missense_variant'] 134285 1011 WRSLGPPG True NCI_RA007_Epitope_Rep1 868.4555361773998 868.45442993586 5.3512 2 -1.2254261720483761 0.3665588078501382 1.0 ['ENST00000269280.8_2_17:5487188-5487734:-|nuORF'] 125082 25509 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 110.29 3 -1.2256359170666011 0.36664104534973097 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 95540 7802 SAQTHFAA True PC9_epitope_Rep4 831.3875161872298 831.38640993586 37.411 2 -1.2256744349835358 0.36664889726392524 1.0 ['ENST00000610187.1_1_9:136997441-137000810:-|nuORF'] 81246 16517 PPPGSLAL True NCI_RA007_Epitope_Rep3 750.42759009406 750.42648993586 72.767 2 -1.225787630609885 0.3666567489834375 1.0 ['NBEA|p.V1805L|1|0.18|ENSG00000172915|chr13:35208746-35208746|G/T|missense_variant'] 25062 23077 FDDYYDYL True PC9_epitope_Rep2 1112.43385724296 1112.43276993586 94.258 2 -1.225890408057941 0.3666769974586252 1.0 ['LTV1|p.D65Y|1|0.14|ENSG00000135521|chr6:143846108-143846108|G/T|missense_variant'] 30718 7199 GALTTQPESP True H1975_Epitope_Rep2 999.4872897981498 999.48618993586 32.625 2 -1.2259619974999962 0.3666790628486426 1.0 ['SV2A|p.E490Sfs*3|1|0.38|ENSG00000159164|chr1:149908118-149908118|C/-|frameshift_variant', 'nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 80394 7648 PLHTPSSP True PC9_epitope_Rep5 834.4235673427801 834.42246993586 34.364 2 -1.2260358258815869 0.3666790628486426 1.0 ['ENST00000377351.8_1_X:47074355-47074421:+|nuORF'] 123311 21327 VHSTHAPT True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 89.091 2 -1.2260363394847986 0.3666790628486426 1.0 ['nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 90177 25130 RHFRVDEW True PC9_epitope_Rep1 1143.5573754769898 1143.55573490379 101.54 3 -1.2260746248249266 0.3666790628486426 1.0 ['ENST00000552943.5_1_16:699416-703842:+|nuORF', 'ENSG00000161996|ENST00000293879|WDR90', 'ENST00000549648.5_1_16:699416-706047:+|nuORF', 'ENST00000420061.6_1_16:699416-706047:+|nuORF'] 121096 14457 VGGAVRRPWPP True PC9_epitope_Rep4 1190.6672602791398 1190.6656049037902 63.519 3 -1.2260837410380276 0.3666790628486426 1.0 ['ENST00000426158.1_3_7:89841229-89854412:+|nuORF'] 63236 12541 LPAAPPVP True PC9_epitope_Rep1 760.44832553864 760.44722993586 53.109 2 -1.2261290747276496 0.36668691351291044 1.0 ['ENST00000358600.7_1_19:14492051-14492228:+|nuORF'] 22709 12945 ETVVEVPQV True PC9_epitope_Rep6 998.5284263341399 998.5273299358599 61.339 2 -1.2261982408677146 0.36668897813476126 1.0 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35057116-35062147:-|nuORF', 'ENST00000480327.1_1_9:35060776-35061606:-|nuORF'] 13539 8369 DPITKSASQV True H1975_Epitope_Rep2 1044.54513902744 1044.5440499358601 37.144 2 -1.2262003907111259 0.36668897813476126 1.0 ['ENSG00000141664|ENST00000269499|ZCCHC2', 'nc|ENSG00000141664|Q9C0B9-2|ZCCHC2'] 75090 1178 NMQKARELWD True PC9_epitope_Rep3 1289.61865540421 1289.61700490379 6.482 3 -1.2262700408600853 0.36668897813476126 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 4848 10655 ALFLWMFLP True PC9_epitope_Rep1 1136.60925993748 1136.60761490379 45.875 3 -1.2262887182395554 0.36668897813476126 1.0 ['RHCE|p.W220L|1|0.32|ENSG00000188672|chr1:25390891-25390891|C/A|missense_variant'] 104179 24723 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 106.91 2 -1.2263170587266579 0.36668897813476126 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 93549 20455 RSQRYLTP True PC9_epitope_Rep6 1019.5512274673898 1019.55067496793 91.396 1 -1.226338644534189 0.36669682809226917 1.0 ['ENST00000368465.5_2_1:154917379-154917481:-|nuORF'] 121663 4412 VGLIQQWMVP True NCI_RA007_Epitope_Rep3 1169.6267009067699 1169.62504490379 24.137 3 -1.22644407816951 0.36670467785517735 1.0 ['ENSG00000185000|ENST00000528718|DGAT1', 'ENST00000524965.5_1_8:145540848-145542370:-|nuORF'] 309 9415 AAIAYLTLNQK True PC9_epitope_Rep4 1204.6815729306002 1204.6804699358602 43.825 2 -1.2264892173534099 0.3667125274234931 1.0 ['CAPN9|p.S105Y|1|0.48|ENSG00000135773|chr1:230759542-230759542|C/A|missense_variant'] 86297 4229 QQEWLEWEDRR True NCI_RA007_Epitope_Rep2 1573.7273539060498 1573.72624993586 21.088 2 -1.22650240038887 0.3667158314844883 1.0 ['ENSG00000161664|ENST00000293414|ASB16'] 94289 7632 RWSRRDHWNMW True H1975_Epitope_Rep3 1628.7531322447599 1628.75149490379 34.339 3 -1.2265059369949272 0.3667158314844883 1.0 ['ENST00000416600.6_1_20:3846925-3847768:+|nuORF'] 11072 4129 DDSVPRYHAV True PC9_epitope_Rep4 1157.54653600977 1157.54488490379 22.203 3 -1.2265473994012142 0.36671913538167894 1.0 ['nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6', 'ENST00000409532.5_2_2:173366626-173368977:+|nuORF'] 56517 17502 LDTTRLLR True NCI_RA007_Epitope_Rep3 986.58727862294 986.58618993586 76.798 2 -1.2265490391706437 0.36671913538167894 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 62657 14899 LLVTTSPSPV True PC9_epitope_Rep5 1012.580461907 1012.57936993586 62.312 2 -1.2265817505819778 0.3667269842843687 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant'] 89822 18205 RFIQRLRS True NCI_RA007_Epitope_Rep4 1074.6410455312998 1074.64047496793 78.778 1 -1.2266056154715 0.3667302877822671 1.0 ['CON__Q9R0H5'] 100039 19904 SLKKRKNCL True PC9_epitope_Rep4 1088.64883333368 1088.64772993586 84.695 2 -1.226609870041802 0.3667302877822671 1.0 ['ENST00000496445.5_1_10:114207222-114224375:+|nuORF'] 54554 13816 LAARITNII True PC9_epitope_Rep2 983.61276509479 983.61166993586 58.426 2 -1.2267203404765432 0.366787710535774 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant'] 71328 22971 MHHDRFKVF True H1975_Epitope_Rep3 1215.5971321139898 1215.59548490379 95.963 3 -1.2267772428931576 0.36679885983393234 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM'] 57725 6828 LENLPSLAP True NCI_RA007_Epitope_Rep1 952.52294703088 952.52184993586 30.566 2 -1.2267805182043743 0.36679885983393234 1.0 ['nc|ENSG00000183248|Q9H6K5-2|PRR36', 'ENSG00000183248|ENST00000618550|PRR36'] 73667 17122 NGLTRHRR True NCI_RA007_Epitope_Rep3 1008.5689432202 1008.56784993586 75.221 2 -1.22679091666446 0.36679885983393234 1.0 ['nc|ENSG00000235109|Q96LW9-2|ZSCAN31', 'ENSG00000235109|ENST00000344279|ZSCAN31'] 98191 10145 SIDSLKRLEHK True PC9_epitope_Rep5 1324.7462984454799 1324.7452099358602 44.008 2 -1.2267981793344696 0.3668021613047142 1.0 ['SYNE1|p.V8387L|1|0.19|ENSG00000131018|chr6:152141290-152141290|C/A|missense_variant'] 56345 14650 LDRIFEGYV True PC9_epitope_Rep5 1110.57095985246 1110.5698699358602 61.354 2 -1.2268118838402728 0.3668021613047142 1.0 ['nc|ENSG00000183914|Q9P225-3|DNAH2'] 81490 6179 PQPPTAPT True PC9_epitope_Rep4 807.41266830591 807.41156993586 30.798 2 -1.2268893012398927 0.366847186249117 1.0 ['CON__P04258', 'nc|ENSG00000168542|P02461-2|COL3A1', 'ENSG00000168542|ENST00000304636|COL3A1'] 17122 9891 EGSVFYPDP True PC9_epitope_Rep3 1009.4392769765698 1009.43816993586 43.003 2 -1.226921094769362 0.3668661784205113 1.0 ['CDH13|p.P475S|1|0.43|ENSG00000140945|chr16:83678346-83678346|C/T|missense_variant'] 10482 16569 CNGNNKAE True NCI_RA007_Epitope_Rep5 848.34466539908 848.34356993586 70.492 2 -1.2269672122448405 0.3668661784205113 1.0 ['ENST00000485596.5_1_15:85634092-85681131:+|nuORF', 'nc|ENSG00000073417|O60658-6|PDE8A', 'nc|ENSG00000073417|O60658-2|PDE8A', 'ENSG00000073417|ENST00000394553|PDE8A', 'ENST00000561105.1_1_15:85643228-85643452:+|nuORF'] 126383 7765 VPLELCFG True NCI_RA007_Epitope_Rep5 876.4415259060399 876.44042993586 36.565 2 -1.2269717301971066 0.3668661784205113 1.0 ['ENSG00000176853|ENST00000334705|FAM91A1', 'ENST00000518333.1_1_8:124821116-124824941:+|nuORF'] 27447 10669 FNNSEYHL True PC9_epitope_Rep3 1022.4457593393402 1022.4446699358599 45.984 2 -1.2269982869686666 0.3668661784205113 1.0 ['ENSG00000090402|ENST00000264382|SI'] 77651 11096 NYYSTLSFT True PC9_epitope_Rep2 1094.49204082542 1094.49094993586 48.005 2 -1.2271762113411695 0.3668942613910953 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 41303 13844 IAHLRCGIYF True H1975_Epitope_Rep1 1191.62228423267 1191.62118993586 58.397 2 -1.2271958977136728 0.3668942613910953 1.0 ['ENST00000265022.7_1_3:185867058-185867445:-|nuORF'] 86882 18809 QRRLPRLEL True NCI_RA007_Epitope_Rep4 1179.7200241279897 1179.71836490379 81.372 3 -1.2272494528531719 0.3669144981412639 1.0 ['ENST00000581937.1_1_18:9678609-9679128:-|nuORF'] 101887 6259 SPLGYGGF True NCI_RA007_Epitope_Rep4 796.3755545211999 796.37444993586 30.679 2 -1.2272531460778726 0.36692234296972775 1.0 ['ENST00000392582.2_1_2:172930337-172937166:+|nuORF', 'ENSG00000172878|ENST00000315796|METAP1D'] 129499 23614 VTFAFSCT True H1975_Epitope_Rep1 874.38949033318 874.38894496793 98.064 1 -1.227281441331666 0.36693803204341846 1.0 ['nc|ENSG00000188092|B7ZAQ6-4|GPR89A', 'ENST00000532574.5_1_1:145811866-145826998:-|nuORF', 'ENST00000478307.5_1_1:147400580-147440603:+|nuORF', 'nc|ENSG00000188092|B7ZAQ6-3|GPR89A', 'ENSG00000188092|ENST00000314163|GPR89B', 'ENSG00000117262|ENST00000313835|GPR89A'] 131644 21080 VWFPDMMPTW True NCI_RA007_Epitope_Rep4 1308.5671374253197 1308.5660299358601 91.4 2 -1.227284136513298 0.36693803204341846 1.0 ['ENSG00000005812|ENST00000355619|FBXL3'] 122360 16859 VGSDPVLM True NCI_RA007_Epitope_Rep3 816.40514039732 816.40459496793 74.186 1 -1.2273117028851515 0.36694587628865977 1.0 ['nc|ENSG00000114423|Q13191-3|CBLB', 'nc|ENSG00000114423|Q13191-2|CBLB', 'ENSG00000114423|ENST00000394030|CBLB'] 73120 8134 NDWKTIGEM True H1975_Epitope_Rep1 1092.4909952796 1092.4898899358602 36.225 2 -1.2273636808629622 0.36696156419597054 1.0 ['ENSG00000125482|ENST00000334270|TTF1'] 95218 8157 SAAPMVKMTR True H1975_Epitope_Rep3 1090.56272075122 1090.56162993586 36.355 2 -1.227375137989387 0.36696156419597054 1.0 ['ENST00000582192.1_1_17:57430638-57431070:+|nuORF'] 46302 16323 ITENREMLP True PC9_epitope_Rep3 1101.54884450889 1101.54774993586 67.922 2 -1.2273903500448702 0.366977251325767 1.0 ['ENSG00000164303|ENST00000296741|ENPP6'] 19614 18904 ELRNRNFGK True PC9_epitope_Rep1 1132.6101393258398 1132.6090499358602 77.499 2 -1.2274498729193615 0.366977251325767 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'ENST00000586709.1_1_18:21478707-21479460:+|nuORF'] 19289 15900 ELLRRKDTHIR True H1975_Epitope_Rep3 1435.83717913855 1435.8360899358602 66.608 2 -1.2274989519438657 0.3669805476396977 1.0 ['ENSG00000107560|ENST00000355624|RAB11FIP2', 'nc|ENSG00000107560|Q7L804-2|RAB11FIP2', 'ENST00000476207.1_1_10:119765292-119774614:-|nuORF'] 22717 7612 ETWQALCRV True H1975_Epitope_Rep2 1104.5386141783597 1104.53750993586 34.232 2 -1.2275517079099914 0.3669805476396977 1.0 ['ATP4A|p.R430Q|1|0.27|ENSG00000105675|chr19:35558653-35558653|C/T|missense_variant'] 65639 19296 LSGQRFTAR True PC9_epitope_Rep1 1034.5621265042598 1034.56102993586 79.026 2 -1.2277392637038842 0.36699122937416384 1.0 ['ENSG00000115641|ENST00000530340|FHL2'] 127871 25826 VRPAIPGGG True PC9_epitope_Rep5 822.4711862415398 822.47008993586 104.76 2 -1.2277430407397678 0.36699122937416384 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 34259 5668 GPKWTFTV True PC9_epitope_Rep1 934.4912529797799 934.49014993586 26.623 2 -1.2277850760526103 0.36699122937416384 1.0 ['nc|ENSG00000173662|Q7RTX1-2|TAS1R1', 'TAS1R1|p.C745Lfs*6|1|0.08|ENSG00000173662|chr1:6579288-6579289|-/C|frameshift_variant', 'ENSG00000173662|ENST00000333172|TAS1R1', 'nc|ENSG00000173662|Q7RTX1-4|TAS1R1'] 15637 11189 EAWMFYKHTR True NCI_RA007_Epitope_Rep3 1367.6444762292297 1367.6433699358602 51.12 2 -1.2277926510678177 0.36699122937416384 1.0 ['ENSG00000104783|ENST00000648319|KCNN4'] 104182 24999 SSDDDDDDDD True NCI_RA007_Epitope_Rep3 1112.29016568288 1112.2890699358602 108.07 2 -1.2277960599764854 0.36699122937416384 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 7439 9778 ASDFQFCWNQ True H1975_Epitope_Rep1 1244.49205790876 1244.4909699358602 42.54 2 -1.227887656082086 0.36699122937416384 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'ENST00000481242.5_1_9:130127572-130155530:+|nuORF', 'ENST00000496711.5_1_9:130126995-130155530:+|nuORF'] 94061 19928 RVRVKGGG True PC9_epitope_Rep6 827.5089687325898 827.50786993586 89.313 2 -1.2278947372352893 0.36699122937416384 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 121122 14977 VGGFDGTS True NCI_RA007_Epitope_Rep3 738.3184335679 738.31788496793 66.355 1 -1.2279339395147342 0.36699122937416384 1.0 ['KEAP1|p.N482_R483delinsS|1|0.54|ENSG00000079999|chr19:10489732-10489734|GGT/-|inframe_deletion'] 67653 4732 LTFFQEWID True NCI_RA007_Epitope_Rep2 1197.57062549929 1197.56896490379 23.036 3 -1.2279757215241929 0.36699122937416384 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3'] 22582 6337 ETNYIRKINP True NCI_RA007_Epitope_Rep2 1246.6669854956199 1246.6658899358602 29.256 2 -1.227990389700038 0.36699122937416384 1.0 ['ENSG00000135697|ENST00000258168|BCO1'] 67053 16156 LTASPRLTL True PC9_epitope_Rep3 970.58113061334 970.58002993586 67.289 2 -1.22805922087828 0.36699122937416384 1.0 ['ENST00000527285.1_1_11:18728401-18728901:+|nuORF'] 46532 8273 ITQLKLERDVH True NCI_RA007_Epitope_Rep3 1350.7619485096202 1350.76084993586 39.667 2 -1.2280649565671728 0.36699122937416384 1.0 ['CEP128|p.E834Kfs*17|1|0.31|ENSG00000100629|chr14:80761490-80761490|C/-|frameshift_variant', 'nc|ENSG00000100629|Q6ZU80-1|CEP128', 'ENSG00000100629|ENST00000555265|CEP128'] 48183 16133 KAVGPKGNIL True PC9_epitope_Rep6 995.6127650947899 995.61166993586 74.399 2 -1.2281103504766344 0.36699122937416384 1.0 ['ENST00000596658.1_1_19:50433558-50434160:+|nuORF'] 70645 11590 MCIMCRFVT True PC9_epitope_Rep1 1102.4795853742198 1102.4784899358601 49.457 2 -1.2281252337479944 0.36699122937416384 1.0 ['chr5:90822097-90965415|264|32.48|0.18|7.5|+|2|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|2'] 34371 5515 GPSTPQRI True PC9_epitope_Rep2 854.46101548066 854.45990993586 26.604 2 -1.2282083396682488 0.3669990709197894 1.0 ['nc|ENSG00000105339|A2RUS2-3|DENND3'] 121863 7754 VGPAKVIV True NCI_RA007_Epitope_Rep4 781.5061747679299 781.50506993586 36.504 2 -1.2282883190455662 0.3670069122711394 1.0 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1'] 80527 21619 PLLPWPPAL True PC9_epitope_Rep1 1002.5902387450599 1002.58914993586 87.983 2 -1.2283298187630118 0.36701475342822104 1.0 ['ENST00000389341.9_1_19:42594426-42594810:-|nuORF'] 111551 7710 TLMEDGSIRIE True H1975_Epitope_Rep1 1262.6176523447 1262.6165499358601 34.619 2 -1.22834025698039 0.3670225943910415 1.0 ['IGSF9B|p.P956Lfs*37|1|0.34|ENSG00000080854|chr11:133920863-133920863|C/-|frameshift_variant', 'nc|ENSG00000080854|Q9UPX0|IGSF9B', 'ENSG00000080854|ENST00000533871|IGSF9B', 'IGSF9B|p.Y421Ifs*37|1|0.41|ENSG00000080854|chr11:133931561-133931561|G/-|frameshift_variant'] 125240 8763 VLQVNKANI True PC9_epitope_Rep4 997.59202965021 997.59092993586 41.215 2 -1.2283925666948134 0.3670304351596081 1.0 ['ENST00000484760.1_1_10:79773365-79779077:-|nuORF'] 134012 12675 WPTPKQRKNL True PC9_epitope_Rep4 1266.71968977482 1266.7180349037899 56.599 3 -1.2284128706272757 0.3670506627028366 1.0 ['DCSTAMP|p.E289Q|1|0.04|ENSG00000164935|chr8:104349417-104349417|G/C|missense_variant'] 134835 14446 WYWRYSEERRA True PC9_epitope_Rep1 1600.75350908424 1600.75186490379 60.389 3 -1.2284577269050638 0.36707872962394095 1.0 ['MMP24|p.R495W|1|0.27|ENSG00000125966|chr20:35271718-35271718|C/T|missense_variant'] 22639 18365 ETRIIHRGRR True NCI_RA007_Epitope_Rep3 1292.75378386776 1292.75212490379 80.425 3 -1.2284854375844996 0.36707872962394095 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 122484 6247 VGSQPSVF True PC9_epitope_Rep4 819.41266830591 819.41156993586 31.075 2 -1.2285909474217938 0.36710099333647106 1.0 ['ENST00000554270.5_1_14:88936247-89016761:-|nuORF', 'ENSG00000070778|ENST00000556564|PTPN21'] 48088 25893 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 107.44 3 -1.2286019426571364 0.36710099333647106 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 134034 19821 WQEWKQPRRDR True H1975_Epitope_Rep1 1583.8069416394296 1583.8058499358601 82.487 2 -1.2286037739174385 0.36710099333647106 1.0 ['ENST00000430935.5_1_7:138875731-138875803:+|nuORF'] 10892 7452 DARDCPHISQ True NCI_RA007_Epitope_Rep3 1140.49820591836 1140.4971099358602 36.435 2 -1.2286101316241926 0.36710099333647106 1.0 ['ENSG00000004142|ENST00000540200|POLDIP2'] 138075 7540 YQEEEWPQ True PC9_epitope_Rep1 1107.4509042894297 1107.44980993586 33.82 2 -1.2286113673621462 0.36710099333647106 1.0 ['ENSG00000134575|ENST00000672073|ACP2', 'ENST00000534448.5_1_11:47269480-47270343:-|nuORF', 'ENST00000529788.2_1_11:47269122-47270343:-|nuORF', 'nc|ENSG00000134575|P11117-2|ACP2', 'ENST00000444355.5_1_11:47267202-47270343:-|nuORF'] 125307 17483 VLRSWWPRWWW True PC9_epitope_Rep5 1656.8466216234397 1656.8449649037902 72.25 3 -1.2286246474964748 0.36710099333647106 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 67469 9334 LTEFYMLAAMA True PC9_epitope_Rep4 1259.5930178199899 1259.5919299358602 43.51 2 -1.2286560299607763 0.3671121239518956 1.0 ['OR5M11|p.L249Cfs*11|1|0.19|ENSG00000255223|chr11:56542513-56542513|G/-|frameshift_variant', 'ENSG00000255223|ENST00000528616|OR5M11'] 59661 8471 LGSSTKQLK True H1975_Epitope_Rep1 960.56039516876 960.55928993586 37.514 2 -1.2286626049438543 0.3671121239518956 1.0 ['chr7:93591771-93807204|455|55.53|0.17|8.36|+|2|GNGT1,None|1'] 74620 14221 NLEDLALRTPN True H1975_Epitope_Rep1 1254.6568147347398 1254.6557099358602 59.88 2 -1.2286693696499307 0.3671121239518956 1.0 ['ENST00000397473.6_1_13:99908655-99908739:-|nuORF'] 127868 25744 VRPAIPGGG True PC9_epitope_Rep1 822.4711862415398 822.47008993586 104.08 2 -1.2286915938511718 0.3671278005523699 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 21752 11432 ESCLSTYELKK True NCI_RA007_Epitope_Rep1 1299.6380534361099 1299.63694993586 48.433 2 -1.2287201728647001 0.3671278005523699 1.0 ['ZMYM4|p.Q419E|1|0.09|ENSG00000146463|chr1:35381332-35381332|C/G|missense_variant'] 117325 20171 VAAKKVGTEI True PC9_epitope_Rep2 1014.6073453611799 1014.60624993586 83.0 2 -1.2287828904139857 0.3671310917084649 1.0 ['nc|ENSG00000133256|P35913-3|PDE6B', 'ENSG00000133256|ENST00000496514|PDE6B'] 45376 11806 ISDNAARVL True PC9_epitope_Rep5 957.52434401321 957.52324993586 50.408 2 -1.2288084125370684 0.3671310917084649 1.0 ['nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 26936 14626 FLHLLFPSL True PC9_epitope_Rep3 1085.62735252977 1085.6262499358602 61.39 2 -1.2288283911818556 0.3671513139969782 1.0 ['ENST00000528443.6_1_1:179888013-179888181:+|nuORF'] 30626 17452 GALCRACL True PC9_epitope_Rep1 805.3938645209699 805.39276993586 71.927 2 -1.228868862756376 0.3671591514235823 1.0 ['ENSG00000169733|ENST00000310496|RFNG', 'ENST00000582478.5_1_17:80008786-80009642:-|nuORF'] 12278 4838 DISISEEDR True NCI_RA007_Epitope_Rep5 1062.4829326937 1062.48182993586 25.301 2 -1.2289630891422354 0.3671599281778218 1.0 ['IRAG1|p.K157R|1|0.26|ENSG00000072952|chr11:10629642-10629642|T/C|missense_variant'] 56380 7316 LDRVHEDL True PC9_epitope_Rep4 995.5036085686298 995.50250993586 35.47 2 -1.2290601317092422 0.3671599281778218 1.0 ['ENSG00000103404|ENST00000219689|USP31', 'ENST00000574408.5_1_17:9559773-9578252:+|nuORF', 'USP43|p.S1068Afs*45|1|0.23|ENSG00000154914|chr17:9728815-9728815|C/-|frameshift_variant', 'nc|ENSG00000154914|Q70EL4-4|USP43', 'ENSG00000154914|ENST00000285199|USP43'] 85979 7435 QPGDPGVP True PC9_epitope_Rep5 765.36571811349 765.36462993586 33.553 2 -1.2290630196777765 0.3671599281778218 1.0 ['ENSG00000204262|ENST00000374866|COL5A2'] 55604 25080 LCRLPHLPVIF True PC9_epitope_Rep2 1306.7583837826598 1306.7572899358602 102.14 2 -1.2290835650000402 0.3671599281778218 1.0 ['ENST00000563915.5_1_16:29831829-29841846:+|nuORF', 'ENST00000566066.5_1_16:29837369-29841846:+|nuORF', 'ENST00000566554.1_1_16:29841580-29841846:+|nuORF', 'ENST00000562285.1_1_16:29831098-29841846:+|nuORF'] 65779 8449 LSIPMTRFAP True NCI_RA007_Epitope_Rep2 1131.61105084263 1131.6099499358602 37.507 2 -1.229092900449275 0.3671599281778218 1.0 ['ENST00000358825.9_1_11:129825441-129830819:-|nuORF', 'ENST00000527581.5_2_11:129817219-129830810:-|nuORF'] 128028 23233 VRRGKKRVK True PC9_epitope_Rep6 1125.75707834305 1125.75544490379 102.47 3 -1.2291116478410429 0.3671599281778218 1.0 ['nc|ENSG00000146966|Q9ULE3-2|DENND2A', 'ENSG00000146966|ENST00000496613|DENND2A'] 119319 17252 VELRRQHSLN True NCI_RA007_Epitope_Rep1 1250.68436689526 1250.6832699358602 71.237 2 -1.2291131434251166 0.3671599281778218 1.0 ['ENST00000553597.5_1_15:25165166-25166312:+|nuORF'] 28754 8402 FTAESGTR True NCI_RA007_Epitope_Rep1 867.4086455546299 867.40754993586 36.685 2 -1.2291188466425174 0.3671599281778218 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1'] 137507 20311 YLPTAGRLTL True PC9_epitope_Rep4 1103.63389446219 1103.63278993586 86.269 2 -1.2291448726185588 0.3671801476051315 1.0 ['nc|ENSG00000134207|Q5T7P8-2|SYT6', 'ENSG00000134207|ENST00000610222|SYT6'] 42753 17493 IFEQFGRIF True PC9_epitope_Rep5 1155.6076797143498 1155.60658993586 72.289 2 -1.2291676838855659 0.3672127493591887 1.0 ['nc|ENSG00000159409|Q5SZQ8-4|CELF3', 'nc|ENSG00000159409|Q5SZQ8-3|CELF3', 'nc|ENSG00000159409|Q5SZQ8-2|CELF3', 'ENSG00000159409|ENST00000290583|CELF3'] 26439 17275 FILVLFIEH True PC9_epitope_Rep1 1129.65356727761 1129.65193490379 71.266 3 -1.2292004709825217 0.36721603784098367 1.0 ['chr1:167822141-167823008|298|19.19|0.82|4.55|-|0|ADCY10,ADCY10|1'] 59854 11855 LHFPPDSLAH True PC9_epitope_Rep5 1132.56654317836 1132.56490490379 50.598 3 -1.229222911372932 0.36721603784098367 1.0 ['SOX3|p.P29H|1|0.43|ENSG00000134595|chrX:140504975-140504975|G/T|missense_variant'] 13985 18982 DRRKLKQRRG True NCI_RA007_Epitope_Rep3 1311.7959830329098 1311.79488993586 82.949 2 -1.2292862649388088 0.36722387320455674 1.0 ['ENST00000344293.5_1_10:8056784-8056973:+|nuORF'] 89486 18385 REQMERRLRTW True NCI_RA007_Epitope_Rep1 1559.8103127677098 1559.80920993586 75.649 2 -1.2293639185997056 0.36723170837409147 1.0 ['ENSG00000166025|ENST00000433060|AMOTL1', 'nc|ENSG00000166025|Q8IY63-2|AMOTL1'] 88592 26213 RALLKRRRPR True H1975_Epitope_Rep2 1320.86908840352 1320.8674349037901 107.77 3 -1.2294186231642275 0.36727542871293256 1.0 ['nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4'] 44659 20294 IPLIERLQRN True NCI_RA007_Epitope_Rep2 1250.7459045226599 1250.74426490379 83.97 3 -1.2295444772654938 0.36727542871293256 1.0 ['ENSG00000107625|ENST00000373585|DDX50', 'ENST00000483593.5_1_10:70666544-70673107:+|nuORF'] 66365 7471 LSQVPHYGWEM True PC9_epitope_Rep5 1345.6125073946098 1345.6114099358601 33.69 2 -1.2295446194897348 0.36727542871293256 1.0 ['FRMPD4|p.P36H|1|0.39|ENSG00000169933|chrX:12498745-12498745|C/A|missense_variant'] 43056 6155 IGGSYKKL True H1975_Epitope_Rep3 864.5069030439199 864.50580993586 28.688 2 -1.2296007163831038 0.36727542871293256 1.0 ['CON__ENSEMBL:ENSBTAP00000031900', 'ENSG00000047457|ENST00000264613|CP', 'ENST00000490639.5_1_3:148895590-148939579:-|nuORF', 'ENST00000489736.5_1_3:148904295-148925363:-|nuORF'] 110116 20355 TIAPILSVPL True PC9_epitope_Rep5 1022.6375828603 1022.6364899358599 83.33 2 -1.229640008079097 0.3672820017581003 1.0 ['ENSG00000187140|ENST00000371116|FOXD3'] 49052 16412 KFLLLLCP True H1975_Epitope_Rep2 945.57214615277 945.57104993586 68.35 2 -1.2296407006934345 0.3672820017581003 1.0 ['ENST00000333751.4_1_17:7256103-7256196:+|nuORF'] 25763 18832 FFRRCWDYHRL True PC9_epitope_Rep5 1597.77247070701 1597.77082490379 77.452 3 -1.229651098914804 0.3672820017581003 1.0 ['ENST00000308982.11_1_3:128631468-128631576:+|nuORF'] 25738 6093 FFLLIIRKLL True PC9_epitope_Rep3 1274.8478504100597 1274.84674993586 28.485 2 -1.2296663114259097 0.3672820017581003 1.0 ['nc|ENSG00000068878|Q14997-3|PSME4'] 21740 6550 ESASPPPK True PC9_epitope_Rep6 811.40758292547 811.40648993586 33.876 2 -1.2296770147970728 0.36728983533490156 1.0 ['nc|ENSG00000138182|Q96Q89-4|KIF20B'] 119284 14090 VELKPHDVR True PC9_epitope_Rep1 1091.60874234351 1091.60764993586 59.028 2 -1.2298282484615737 0.3673211677024785 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 46684 20513 ITVVHKKLS True PC9_epitope_Rep5 1023.6440652230699 1023.6429699358599 83.945 2 -1.2298410593360947 0.3673211677024785 1.0 ['ZNF800|p.S545L|1|0.12|ENSG00000048405|chr7:127373702-127373702|G/A|missense_variant'] 41094 2260 HYLRSPMHHL True NCI_RA007_Epitope_Rep5 1289.64514493557 1289.64349490379 12.818 3 -1.2298476360590396 0.3673211677024785 1.0 ['ENST00000397872.5_1_22:29945099-29949566:-|nuORF'] 104381 11616 SSGERWIRY True PC9_epitope_Rep1 1152.5676058075198 1152.56650993586 49.559 2 -1.2298685640328442 0.3673211677024785 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 134730 12416 WWTRKRRKERE True H1975_Epitope_Rep3 1629.8964253501697 1629.8953299358602 52.947 2 -1.229909696817858 0.36732445280776466 1.0 ['ENSG00000184916|ENST00000331782|JAG2', 'ENST00000546616.1_1_14:105609034-105613077:-|nuORF', 'nc|ENSG00000184916|Q9Y219-2|JAG2'] 118770 14133 VEDVFHKAQ True PC9_epitope_Rep2 1071.53490869691 1071.53380993586 59.634 2 -1.2299778592489254 0.36732445280776466 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.S2410Lfs*12|1|0.26|ENSG00000197653|chr12:123867998-123867998|C/-|frameshift_variant'] 119625 14305 VESAYLNL True H1975_Epitope_Rep1 907.4650978015899 907.46400993586 60.211 2 -1.230002624424899 0.3673277377503776 1.0 ['ENSG00000182578|ENST00000675795|CSF1R'] 58731 17930 LFLILALEERA True NCI_RA007_Epitope_Rep1 1286.7598232512998 1286.7587299358602 73.881 2 -1.2300035520240191 0.3673277377503776 1.0 ['ENST00000512845.5_1_4:121737455-121843799:-|nuORF'] 43648 14693 IILKRKRGRPP True PC9_epitope_Rep2 1332.8830071321597 1332.88135490379 61.782 3 -1.230084402580738 0.36734946469459745 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 95848 24169 SDLCESRQ True H1975_Epitope_Rep2 936.3970948947599 936.39598993586 99.499 2 -1.2300927193118845 0.36734946469459745 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 38320 8588 HFSSSGCP True PC9_epitope_Rep2 820.31738802208 820.31628993586 38.394 2 -1.2301435408926056 0.36734946469459745 1.0 ['SH2B3|p.L501F|1|0.16|ENSG00000111252|chr12:111448075-111448075|C/T|missense_variant'] 66363 19273 LSQVFLII True PC9_epitope_Rep5 931.5742543277498 931.57314993586 79.177 2 -1.230167130661176 0.36734946469459745 1.0 ['ENSG00000038532|ENST00000409790|CLEC16A', 'nc|ENSG00000038532|Q2KHT3-2|CLEC16A'] 5023 13529 ALLELWDERH True PC9_epitope_Rep1 1280.65133543148 1280.6496749037901 56.894 3 -1.2302032321703809 0.36734946469459745 1.0 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.A2365Gfs*44|3|0.14|ENSG00000163554|chr1:158612859-158612860|-/A|frameshift_variant', 'SPTA1|p.S1181Rfs*59|1|0.24|ENSG00000163554|chr1:158649882-158649882|A/-|frameshift_variant', 'SPTA1|p.R1164Afs*76|1|0.26|ENSG00000163554|chr1:158649935-158649935|G/-|frameshift_variant', 'SPTA1|p.H1183Mfs*57|1|0.25|ENSG00000163554|chr1:158649878-158649878|G/-|frameshift_variant', 'SPTA1|p.D1665Tfs*2|1|0.27|ENSG00000163554|chr1:158638229-158638229|C/-|frameshift_variant', 'SPTA1|p.V1843Sfs*9|2|0.42|ENSG00000163554|chr1:158634582-158634582|A/-|frameshift_variant'] 118554 14299 VDVVMGDPVL True PC9_epitope_Rep3 1042.5368828428598 1042.53578993586 60.088 2 -1.2302472062129024 0.36734946469459745 1.0 ['ENSG00000076826|ENST00000160298|CAMSAP3', 'nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3'] 115771 15310 TVLRLIQDP True PC9_epitope_Rep4 1053.61824439805 1053.6171499358602 66.823 2 -1.2302762224601058 0.36734946469459745 1.0 ['CON__Q0V8M9'] 73299 8823 NEKNLPQHRFP True NCI_RA007_Epitope_Rep5 1378.7105816430999 1378.7094899358601 40.604 2 -1.2302776426322175 0.36734946469459745 1.0 ['ENSG00000138756|ENST00000502613|BMP2K'] 101320 8584 SLYLSSAEHPG True NCI_RA007_Epitope_Rep2 1159.5509526838698 1159.54984993586 38.033 2 -1.2303553679124137 0.36734946469459745 1.0 ['nc|ENSG00000187098|O75030-8|MITF', 'nc|ENSG00000187098|O75030-7|MITF'] 17763 5320 EHVAQTPTPGG True NCI_RA007_Epitope_Rep2 1092.5199869087598 1092.5188899358602 25.315 2 -1.2303557299752832 0.36734946469459745 1.0 ['ENST00000487577.5_1_22:50968091-50968379:-|nuORF'] 81538 16600 PQYLLHSLW True PC9_epitope_Rep5 1155.60767971435 1155.60658993586 68.857 2 -1.23039352395243 0.36734946469459745 1.0 ['ENST00000485149.1_1_1:109856516-109859516:-|nuORF'] 135724 6572 YEKDKERE True H1975_Epitope_Rep1 1095.5196525555898 1095.5185499358602 30.338 2 -1.2303936310526125 0.36734946469459745 1.0 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3'] 41945 12028 IEARRRAH True PC9_epitope_Rep5 1007.5736942474698 1007.57258993586 51.26 2 -1.2304011586321864 0.36734946469459745 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 53978 21317 KYKWYLKKLVF True H1975_Epitope_Rep2 1514.9013425348996 1514.90024993586 88.209 2 -1.2305265209840053 0.36734946469459745 1.0 ['ENSG00000174992|ENST00000400752|ZG16'] 62845 23704 LMIYFYREE True H1975_Epitope_Rep1 1262.6005457285798 1262.59944993586 98.409 2 -1.230543217321449 0.36734946469459745 1.0 ['ENST00000510293.1_1_4:156835507-156839956:+|nuORF', 'ENSG00000151790|ENST00000536354|TDO2'] 111748 8703 TLQGPEKEPLK True H1975_Epitope_Rep3 1238.6870522338597 1238.6859499358602 38.475 2 -1.230546043634153 0.36734946469459745 1.0 ['ENST00000376962.9_1_9:74978427-74979660:-|nuORF'] 64349 13809 LQNRRLFQSLH True PC9_epitope_Rep6 1410.7844152896998 1410.7833099358602 64.92 2 -1.2305504125162592 0.36734946469459745 1.0 ['ENST00000575689.4_1_13:24041048-24044692:+|nuORF', 'ENST00000576696.2_1_13:24041102-24041303:+|nuORF'] 64941 16641 LSCHCHSC True PC9_epitope_Rep6 888.3040635404002 888.30296993586 76.477 2 -1.2305841195356793 0.3673944254666073 1.0 ['ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant'] 38335 21016 HFYLKEKKKK True PC9_epitope_Rep6 1347.8026911227896 1347.80104490379 93.662 3 -1.2306689981597416 0.36741791358803944 1.0 ['ENST00000342085.8_1_16:2647774-2647957:+|nuORF'] 37859 11843 HDRYDHQQFKK True NCI_RA007_Epitope_Rep1 1500.7222089559598 1500.72110993586 50.048 2 -1.230689108816284 0.36741791358803944 1.0 ['ENST00000483741.1_1_1:44684093-44685454:+|nuORF', 'ENSG00000178028|ENST00000372289|DMAP1'] 81056 26575 PPAQFRKR True PC9_epitope_Rep1 998.5773826455799 998.57628993586 107.95 2 -1.2307072681668216 0.36741791358803944 1.0 ['nc|ENSG00000134884|Q9NWB6-3|ARGLU1', 'nc|ENSG00000134884|Q9NWB6-2|ARGLU1'] 5296 17077 ALRWRKRRWEW True H1975_Epitope_Rep3 1641.9116814914896 1641.9105899358601 71.297 2 -1.2307983775017217 0.3674381188118812 1.0 ['ENST00000456291.1_3_9:123638279-123638699:-|nuORF'] 137029 17867 YKREMPQG True NCI_RA007_Epitope_Rep2 1007.4858503295097 1007.48474993586 74.238 2 -1.2308670713156127 0.3674583235355998 1.0 ['ENSG00000050555|ENST00000361069|LAMC3'] 117472 13044 VAEALSTF True PC9_epitope_Rep6 836.42798401688 836.42688993586 61.769 2 -1.2308791584201006 0.367466151827925 1.0 ['nc|ENSG00000174792|Q17RF5-2|ODAPH'] 65868 7533 LSKYCFFFL True H1975_Epitope_Rep3 1166.58343911246 1166.58234993586 33.958 2 -1.2309160829468158 0.3674739799264879 1.0 ['ENST00000368990.7_2_10:124190627-124190768:+|nuORF'] 97294 24732 SFRMNLVIPV True PC9_epitope_Rep2 1174.65325000778 1174.65160490379 100.81 3 -1.2309383892547365 0.36749418345626456 1.0 ['ENST00000320876.10_2_18:2722567-2722627:+|nuORF'] 25737 5994 FFLLIIRKLL True PC9_epitope_Rep3 1274.8478504100597 1274.84674993586 28.111 2 -1.2310214148512366 0.3675143864859848 1.0 ['nc|ENSG00000068878|Q14997-3|PSME4'] 77656 9891 NYYSTLSFT True PC9_epitope_Rep6 1094.49204082542 1094.49094993586 48.547 2 -1.2310392739811677 0.36751766554877674 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 122984 12208 VGWSDSYTCEY True PC9_epitope_Rep1 1308.49686850568 1308.4957699358602 51.816 2 -1.231061760628745 0.36751766554877674 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 81129 16398 PPHTDSTL True PC9_epitope_Rep5 866.4133965819001 866.41228993586 68.074 2 -1.2311148234636076 0.36752549252549255 1.0 ['ENST00000339511.9_1_3:9798606-9798831:+|nuORF'] 15953 8219 EDTPYILEPGE True H1975_Epitope_Rep1 1261.5714133449299 1261.57030993586 36.558 2 -1.2313310177721652 0.3675658953099864 1.0 ['ENSG00000176092|ENST00000308182|CRYBG2'] 127660 11248 VRELYRAWYRE True H1975_Epitope_Rep1 1539.7946456202296 1539.79354993586 48.241 2 -1.231372134628151 0.3675658953099864 1.0 ['ENSG00000184983|ENST00000498737|NDUFA6'] 125748 8474 VNGKKVLH True NCI_RA007_Epitope_Rep2 893.5446855349699 893.54358993586 37.605 2 -1.2314601883869696 0.3675860959522837 1.0 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2', 'ENSG00000203879|ENST00000447750|GDI1', 'ENST00000491154.1_1_X:153666748-153668487:+|nuORF'] 55659 13862 LDAQPAERGGQ True NCI_RA007_Epitope_Rep5 1140.5523496661997 1140.5506949037901 59.994 3 -1.2315039917364 0.367618670494481 1.0 ['ENSG00000271447|ENST00000605424|MMP28', 'nc|ENSG00000271447|Q9H239-2|MMP28'] 121479 18068 VGKADIWLIR True PC9_epitope_Rep6 1169.6920780446499 1169.69044490379 82.129 3 -1.231556195299312 0.3676219466924048 1.0 ['UGT2A3|p.E252D|2|0.53|ENSG00000135220|chr4:68945414-68945414|C/G|missense_variant'] 23262 19094 EVRLRFLSYED True H1975_Epitope_Rep3 1425.7252286477299 1425.7241299358602 80.062 2 -1.231590710240193 0.3676219466924048 1.0 ['ENSG00000159915|ENST00000683810|ZNF233'] 32607 12508 GHDPIILNF True PC9_epitope_Rep6 1024.53418042092 1024.53308993586 59.539 2 -1.2317292387641419 0.3676545195817608 1.0 ['ENST00000295112.13_1_2:55509501-55511570:+|nuORF', 'nc|ENSG00000293422|A6NEY8|PRORSD1P'] 105358 8403 STYGVVTVP True NCI_RA007_Epitope_Rep2 921.4807478657299 921.47964993586 37.327 2 -1.2317525195983157 0.36766234409027915 1.0 ['ENST00000444025.1_1_7:23602816-23603164:-|nuORF'] 8652 5091 AVAQLWGQK True NCI_RA007_Epitope_Rep5 999.55016483823 999.54906993586 26.281 2 -1.2317952830017291 0.36767799252641736 1.0 ['nc|ENSG00000163435|P78545-2|ELF3', 'ENSG00000163435|ENST00000367284|ELF3', 'ENST00000475698.1_1_1:201982922-201984448:+|nuORF'] 40659 17579 HTKCRIIHTD True H1975_Epitope_Rep2 1222.6240751378198 1222.62296993586 72.928 2 -1.2318171621251757 0.36767799252641736 1.0 ['SRPK1|p.F609Lfs*4|1|0.21|ENSG00000096063|chr6:35835445-35835445|A/-|frameshift_variant', 'nc|ENSG00000096063|Q96SB4-4|SRPK1', 'ENSG00000096063|ENST00000373825|SRPK1', 'nc|ENSG00000096063|Q96SB4-3|SRPK1', 'SRPK1|p.G350Wfs*6|1|0.28|ENSG00000096063|chr6:35869846-35869847|-/C|frameshift_variant'] 16856 12889 EFSIAMKLIK True H1975_Epitope_Rep3 1178.67331674602 1178.67220993586 54.803 2 -1.2318375448357115 0.36768581645405163 1.0 ['ITSN2|p.G507Afs*55|1|0.21|ENSG00000198399|chr2:24295779-24295779|C/-|frameshift_variant', 'nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2', 'ENST00000407704.1_1_2:24534520-24550951:-|nuORF', 'nc|ENSG00000205726|Q15811-4|ITSN1', 'nc|ENSG00000205726|Q15811-9|ITSN1', 'nc|ENSG00000205726|Q15811-8|ITSN1', 'ENSG00000205726|ENST00000381318|ITSN1', 'nc|ENSG00000205726|Q15811-13|ITSN1', 'nc|ENSG00000205726|Q15811-6|ITSN1', 'nc|ENSG00000205726|Q15811-5|ITSN1', 'nc|ENSG00000205726|Q15811-12|ITSN1', 'nc|ENSG00000205726|Q15811-11|ITSN1', 'nc|ENSG00000205726|Q15811-3|ITSN1', 'nc|ENSG00000205726|Q15811-10|ITSN1', 'nc|ENSG00000205726|Q15811-7|ITSN1', 'nc|ENSG00000205726|Q15811-2|ITSN1', 'CON__ENSEMBL:ENSBTAP00000001528'] 40626 20519 HTFDTFSRD True PC9_epitope_Rep2 1124.48868678048 1124.4875899358601 84.357 2 -1.2319439880278367 0.36769364018807227 1.0 ['nc|ENSG00000127328|Q96QF0-3|RAB3IP', 'nc|ENSG00000127328|Q96QF0-4|RAB3IP'] 134283 726 WRSLGPPG True NCI_RA007_Epitope_Rep1 868.4555361773998 868.45442993586 3.8316 2 -1.2320183616809153 0.3676956387256418 1.0 ['ENST00000269280.8_2_17:5487188-5487734:-|nuORF'] 79758 18244 PHTLLDKTI True PC9_epitope_Rep3 1036.59169529704 1036.5905899358602 75.386 2 -1.2320456787850014 0.3676956387256418 1.0 ['ENSG00000196350|ENST00000601693|ZNF729'] 122956 8368 VGWGGSWG True NCI_RA007_Epitope_Rep3 804.3554877829599 804.35493496793 40.018 1 -1.2320482441093479 0.3676956387256418 1.0 ['ENST00000461023.5_1_16:343426-396314:-|nuORF'] 55718 4729 LDDLTASWPD True NCI_RA007_Epitope_Rep2 1131.50841916555 1131.50732993586 23.023 2 -1.2320828582219248 0.3676956387256418 1.0 ['HSPB8|p.P41L|1|0.15|ENSG00000152137|chr12:119179434-119179434|C/T|missense_variant'] 119766 17050 VETVELKI True NCI_RA007_Epitope_Rep5 929.5433481222899 929.54224993586 72.345 2 -1.2320834676554069 0.3676956387256418 1.0 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1'] 9325 12282 AVSPANLPAV True PC9_epitope_Rep1 937.5232813840499 937.52218993586 52.096 2 -1.2322925298393375 0.367759495236917 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1', 'nc|ENSG00000172534|P51610-3|HCFC1'] 16537 11781 EEQELHDI True H1975_Epitope_Rep2 1011.4509042894299 1011.44980993586 50.39 2 -1.2323032552523223 0.367759495236917 1.0 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A', 'ENST00000507080.5_1_4:176556058-176562011:-|nuORF'] 134111 15197 WRCFQWWRMDW True NCI_RA007_Epitope_Rep1 1698.7336426701397 1698.73254993586 63.184 2 -1.232305792427128 0.367759495236917 1.0 ['ENST00000582986.5_1_17:62801160-62833227:-|nuORF', 'ENST00000430334.7_1_17:43555485-43568071:-|nuORF'] 100345 19407 SLMVARSIL True PC9_epitope_Rep4 988.5739370579199 988.57282993586 82.759 2 -1.232306639366033 0.367759495236917 1.0 ['nc|ENSG00000011243|Q9ULX6-2|AKAP8L', 'ENSG00000011243|ENST00000397410|AKAP8L'] 16272 6957 EEIGTLGWDKL True H1975_Epitope_Rep1 1259.6397676882698 1259.6386699358602 31.8 2 -1.2323174540406574 0.367759495236917 1.0 ['nc|ENSG00000115392|Q9NW38-2|FANCL', 'ENSG00000115392|ENST00000233741|FANCL'] 63409 9566 LPGIHVSA True PC9_epitope_Rep4 792.4493881678 792.44828993586 44.413 2 -1.2323675682609616 0.3677673169947174 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 128627 16852 VSLDDGWI True PC9_epitope_Rep5 903.43379767331 903.43270993586 69.83 2 -1.2324665864543554 0.3678122525732383 1.0 ['ENSG00000163214|ENST00000457308|DHX57'] 121872 4106 VGPCCTCCC True NCI_RA007_Epitope_Rep1 887.2468085580699 887.24570993586 20.037 2 -1.2326752920284272 0.3678715455602563 1.0 ['nc|ENSG00000112212|Q5TGU0-2|TSPO2'] 5400 18419 ALVPDELLK True NCI_RA007_Epitope_Rep2 996.5855472874399 996.58499496793 76.413 1 -1.23270960622803 0.3678715455602563 1.0 ['nc|ENSG00000086015|Q6P0Q8-2|MAST2', 'ENSG00000086015|ENST00000361297|MAST2'] 82909 24831 PWASLYRER True NCI_RA007_Epitope_Rep4 1176.6039913162401 1176.60235490379 107.98 3 -1.2327451126167641 0.3678715455602563 1.0 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 44305 7654 ILYGLLLQP True NCI_RA007_Epitope_Rep5 1028.6270181766 1028.62592993586 36.143 2 -1.2327585832597983 0.3678715455602563 1.0 ['CON__ENSEMBL:ENSBTAP00000016285'] 70586 5054 LYYKCGAQ True H1975_Epitope_Rep3 944.4425885351998 944.44148993586 24.562 2 -1.2327596505795233 0.3678715455602563 1.0 ['nc|ENSG00000131269|O75027-3|ABCB7', 'ENSG00000131269|ENST00000373394|ABCB7', 'nc|ENSG00000131269|O75027-2|ABCB7'] 118941 15265 VEERWERRRPR True NCI_RA007_Epitope_Rep2 1567.8443897773097 1567.8432899358602 64.072 2 -1.232763751645731 0.3678715455602563 1.0 ['ENST00000373191.8_1_1:36396730-36396826:+|nuORF'] 106522 6287 SVVRFDKDERE True H1975_Epitope_Rep1 1378.6840921117398 1378.6829899358602 29.25 2 -1.2327899482818794 0.36788263381205083 1.0 ['ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2'] 35970 18173 GVAVIDYKLF True PC9_epitope_Rep6 1123.62774645259 1123.62664993586 82.543 2 -1.232805226228928 0.36788263381205083 1.0 ['KLHL1|p.D506Y|1|0.34|ENSG00000150361|chr13:69796861-69796861|C/A|missense_variant'] 48340 4989 KDVFDDGR True NCI_RA007_Epitope_Rep5 950.4457593393398 950.44466993586 25.894 2 -1.23281964131856 0.36788263381205083 1.0 ['ENSG00000072133|ENST00000262752|RPS6KA6', 'nc|ENSG00000072133|Q9UK32-2|RPS6KA6', 'ENST00000495332.1_1_X:83359500-83361456:-|nuORF'] 13686 7460 DQETPPAPP True H1975_Epitope_Rep2 950.4345259492998 950.43342993586 33.642 2 -1.2328761150792986 0.36789045298236067 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4', 'nc|ENSG00000184716|A6NH21-2|SERINC4', 'ENST00000448553.5_1_15:44087200-44089477:-|nuORF'] 32812 11870 GIFNSLWF True PC9_epitope_Rep3 982.4912529797799 982.49014993586 50.677 2 -1.2331224816170692 0.3679431992479343 1.0 ['nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3', 'ENSG00000152578|ENST00000282499|GRIA4', 'ENST00000481559.6_1_5:152869375-153085697:+|nuORF', 'nc|ENSG00000155511|P42261-3|GRIA1', 'nc|ENSG00000155511|P42261-4|GRIA1', 'nc|ENSG00000155511|P42261-2|GRIA1', 'ENSG00000155511|ENST00000285900|GRIA1', 'nc|ENSG00000155511|P42261-6|GRIA1', 'nc|ENSG00000155511|P42261-5|GRIA1', 'nc|ENSG00000120251|P42262-4|GRIA2', 'nc|ENSG00000120251|P42262-2|GRIA2', 'ENSG00000120251|ENST00000264426|GRIA2', 'nc|ENSG00000120251|P42262-3|GRIA2'] 71541 12852 MLARGQPLP True PC9_epitope_Rep5 981.54297128281 981.54186993586 54.445 2 -1.2331625692726447 0.3679431992479343 1.0 ['nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'SMARCA2|p.L456Ffs*51|1|0.12|ENSG00000080503|chr9:2058311-2058311|G/-|frameshift_variant', 'nc|ENSG00000127616|P51532-5|SMARCA4', 'nc|ENSG00000127616|P51532-2|SMARCA4', 'nc|ENSG00000127616|P51532-3|SMARCA4', 'nc|ENSG00000127616|P51532-4|SMARCA4', 'ENSG00000127616|ENST00000344626|SMARCA4', 'SMARCA4|p.A1168Qfs*4|1|0.29|ENSG00000127616|chr19:11030848-11030848|G/-|frameshift_variant', 'SMARCA4|p.V845Afs*13|2|0.21|ENSG00000127616|chr19:11019619-11019619|T/-|frameshift_variant', 'SMARCA4-C19orf38|1|fusion'] 24540 14341 FALIFAGFGFY True H1975_Epitope_Rep2 1251.6328318330297 1251.6317299358602 60.313 2 -1.2332560007366506 0.3679633867276888 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3'] 61086 11909 LLCALKGAR True PC9_epitope_Rep3 943.5637067273899 943.56260993586 50.828 2 -1.2334396733861968 0.36797902210347944 1.0 ['nc|ENSG00000182912|P59090-2|TSPEAR-AS2'] 123373 14306 VICDYDHV True PC9_epitope_Rep5 962.4167677101799 962.41566993586 60.032 2 -1.2334757536754535 0.36797902210347944 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'nc|ENSG00000172901|Q6Q4G3-2|LVRN', 'LVRN|p.T321I|1|0.48|ENSG00000172901|chr5:115984693-115984693|C/T|missense_variant'] 125860 23142 VNRELAATTV True PC9_epitope_Rep4 1072.58767254576 1072.58656993586 97.234 2 -1.2335149509158607 0.3679888192151188 1.0 ['PTX3|p.G287R|2|0.19|ENSG00000163661|chr3:157442692-157442692|G/C|missense_variant'] 78744 11710 PEGPLPPA True H1975_Epitope_Rep3 776.40685464948 776.40630496793 50.183 1 -1.2336076446375475 0.3679888192151188 1.0 ['ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA'] 77339 24508 NYKTLIII True NCI_RA007_Epitope_Rep2 976.5957180483199 976.59516496793 102.95 1 -1.2336112226995046 0.3679888192151188 1.0 ['ENSG00000138604|ENST00000261858|GLCE'] 112645 20877 TPEQYLTPL True PC9_epitope_Rep4 1060.54407639828 1060.5429699358601 88.459 2 -1.2336222260456997 0.3679888192151188 1.0 ['ENSG00000101298|ENST00000381867|SNPH', 'nc|ENSG00000101298|O15079|SNPH'] 120243 7506 VFPAAPGP True NCI_RA007_Epitope_Rep1 754.4013753462199 754.40026993586 33.19 2 -1.2336474627847582 0.3679888192151188 1.0 ['ENST00000252445.7_1_19:11664136-11664256:-|nuORF'] 58556 15484 LFDSHDDRDDD True H1975_Epitope_Rep3 1348.51675200312 1348.5156499358602 64.977 2 -1.2336577996762677 0.3679888192151188 1.0 ['nc|ENSG00000117859|Q96SU4-7|OSBPL9', 'nc|ENSG00000117859|Q96SU4-2|OSBPL9', 'ENSG00000117859|ENST00000428468|OSBPL9', 'nc|ENSG00000117859|Q96SU4-6|OSBPL9', 'nc|ENSG00000117859|Q96SU4-3|OSBPL9', 'nc|ENSG00000117859|Q96SU4-5|OSBPL9', 'nc|ENSG00000117859|Q96SU4-4|OSBPL9', 'ENST00000533825.1_1_1:52237763-52247292:+|nuORF', 'ENST00000531819.5_1_1:52231540-52246838:+|nuORF'] 13450 5334 DNVTIFCNIF True H1975_Epitope_Rep3 1184.55359553616 1184.5524899358602 25.589 2 -1.2337136501494492 0.3679920845958815 1.0 ['ENSG00000188211|ENST00000338965|NCR3LG1'] 125742 12238 VNFRQHSL True PC9_epitope_Rep5 999.52501271955 999.52390993586 52.059 2 -1.2337313114711874 0.3679920845958815 1.0 ['ENST00000258963.7_1_17:56051264-56051366:-|nuORF'] 37318 10721 GVVREWMGF True PC9_epitope_Rep2 1079.5222358382298 1079.52112993586 46.554 2 -1.2337478830070465 0.3679940638139995 1.0 ['ENST00000356641.7_2_11:120356335-120356476:+|nuORF'] 84208 6642 QETNLRVEGPQ True H1975_Epitope_Rep3 1269.6313282628898 1269.6302299358601 30.503 2 -1.2337721312971728 0.3679940638139995 1.0 ['nc|ENSG00000005379|O95153-2|TSPOAP1'] 98808 11819 SITHYRPV True PC9_epitope_Rep5 971.51886470995 971.51776993586 50.457 2 -1.2337945358534999 0.3679940638139995 1.0 ['ENSG00000102119|ENST00000369842|EMD', 'ENST00000471965.1_1_X:153609106-153609554:+|nuORF'] 22948 6362 EVHKIKYVMLH True NCI_RA007_Epitope_Rep1 1395.76967674235 1395.76804490379 28.773 3 -1.233854582976548 0.3679940638139995 1.0 ['ENST00000496877.1_1_3:100630362-100630893:-|nuORF'] 12788 12385 DLIGCQRL True PC9_epitope_Rep2 916.4800366730799 916.47892993586 52.948 2 -1.233859387751443 0.3679940638139995 1.0 ['ENSG00000112739|ENST00000337659|PRPF4B', 'ENST00000463634.6_1_6:4056876-4060847:+|nuORF'] 118473 7057 VDRKWQEFRT True NCI_RA007_Epitope_Rep2 1363.6996826062298 1363.69804490379 32.073 3 -1.233921601105581 0.3680513473738885 1.0 ['BTBD16|p.G460R|2|0.16|ENSG00000138152|chr10:122336608-122336608|G/C|missense_variant'] 47067 8019 IVTSSLLG True PC9_epitope_Rep1 788.4643695256 788.46326993586 35.666 2 -1.2339804980834406 0.368059162523806 1.0 ['ENST00000590402.1_1_17:66422197-66423441:-|nuORF'] 97543 6003 SGVDEHAPIS True PC9_epitope_Rep2 1010.46688870674 1010.46578993586 28.479 2 -1.2340142676658974 0.3680735034068285 1.0 ['ENSG00000170264|ENST00000404929|FAM161A', 'nc|ENSG00000170264|Q3B820|FAM161A'] 41701 6492 IDLLENVP True NCI_RA007_Epitope_Rep1 911.49639792987 911.49530993586 29.271 2 -1.2340170498216272 0.3680735034068285 1.0 ['nc|ENSG00000103647|Q9UQ03-2|CORO2B', 'ENSG00000103647|ENST00000261861|CORO2B'] 124919 17282 VLLSTVTA True NCI_RA007_Epitope_Rep5 802.48001958974 802.47892993586 73.249 2 -1.2340325277277047 0.3680735034068285 1.0 ['ENSG00000120948|ENST00000240185|TARDBP', 'ENST00000456601.1_1_2:239140521-239140857:+|nuORF'] 23330 8250 EVTEFYVQNEN True H1975_Epitope_Rep2 1370.5990250750995 1370.59792993586 36.687 2 -1.234038380402262 0.3680735034068285 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'ENST00000469042.5_1_3:132298334-132378619:-|nuORF', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'nc|ENSG00000240303|Q709F0-2|ACAD11'] 71096 5410 METDLEVRLR True H1975_Epitope_Rep3 1260.6496211793199 1260.64852993586 25.871 2 -1.234071436314137 0.3680735034068285 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 18353 10376 EIWNTFFHERY True H1975_Epitope_Rep1 1540.7099129367598 1540.7082749037902 44.861 3 -1.2341299440120674 0.36811841519513283 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 14419 16802 DTISQISHPSE True PC9_epitope_Rep5 1212.5622456435601 1212.5611499358602 69.637 2 -1.234177472247255 0.3681216767651787 1.0 ['ENST00000456822.5_1_X:129168440-129168512:+|nuORF'] 134779 9866 WYFVFVFRRRC True NCI_RA007_Epitope_Rep2 1577.8077935865697 1577.80668993586 43.002 2 -1.2342108305041013 0.3681216767651787 1.0 ['ENST00000507721.5_1_4:83346026-83346083:-|nuORF'] 67676 6887 LTFRDNADL True NCI_RA007_Epitope_Rep2 1063.52982331647 1063.5287299358602 31.406 2 -1.234332928972028 0.36813730339301615 1.0 ['ENSG00000147724|ENST00000395297|FAM135B', 'nc|ENSG00000147724|Q49AJ0-2|FAM135B', 'ENST00000482951.6_1_8:139144838-139379577:-|nuORF', 'FAM135B|p.R1289G|1|0.28|ENSG00000147724|chr8:138139022-138139022|G/C|missense_variant'] 1674 16595 AEGLRESRKHI True NCI_RA007_Epitope_Rep1 1294.7105816430999 1294.7094899358601 68.668 2 -1.234333713985397 0.36813730339301615 1.0 ['nc|ENSG00000103507|O14874-3|BCKDK', 'ENSG00000103507|ENST00000219794|BCKDK', 'ENST00000566568.1_1_16:31121058-31121856:+|nuORF', 'nc|ENSG00000103507|O14874-2|BCKDK'] 46176 12717 ITDGLHALQ True PC9_epitope_Rep5 966.51344497634 966.51234993586 53.922 2 -1.234467136160801 0.3681483771251932 1.0 ['ENSG00000136824|ENST00000374793|SMC2', 'nc|ENSG00000136824|O95347-2|SMC2'] 58290 4133 LETGPAPH True PC9_epitope_Rep5 820.4079172786401 820.40682993586 20.972 2 -1.2344693378621405 0.3681483771251932 1.0 ['ENST00000436115.6_1_19:1390815-1393403:+|nuORF', 'nc|ENSG00000115286|O75251-2|NDUFS7', 'ENST00000545446.5_1_19:1388688-1393403:+|nuORF', 'ENST00000538523.5_1_19:1387763-1393403:+|nuORF', 'ENST00000543289.5_1_19:1388924-1393403:+|nuORF', 'ENST00000591358.1_1_19:1393133-1393403:+|nuORF'] 122988 9694 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 42.237 2 -1.2345059073603877 0.3681483771251932 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 100474 11955 SLPKAHTVP True PC9_epitope_Rep3 948.53926580136 948.53816993586 51.007 2 -1.2345732585356355 0.36818091893763294 1.0 ['ENSG00000268964|ENST00000601417|ERVV-2'] 125078 24888 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 107.6 3 -1.2346163727282808 0.3681887310360177 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 33428 11467 GLGELLRSL True PC9_epitope_Rep3 956.5654805492 956.56438993586 49.106 2 -1.2347125281827827 0.3682460001483716 1.0 ['ENSG00000149257|ENST00000358171|SERPINH1'] 85270 21075 QKRKKEKP True H1975_Epitope_Rep2 1040.6454622053998 1040.6443699358601 87.237 2 -1.2347163377297743 0.3682492581602374 1.0 ['NMT2|p.R318Efs*3|1|0.19|ENSG00000152465|chr10:15128397-15128397|T/-|frameshift_variant', 'NMT2|p.N356Ifs*5|1|0.16|ENSG00000152465|chr10:15119425-15119446|TGAAACTGCTTCAGGTAAGTGT/-|frameshift_variant', 'ENSG00000152465|ENST00000378165|NMT2', 'ENST00000378150.1_1_10:15177331-15210611:-|nuORF'] 15254 7562 EAGLAPGELQ True H1975_Epitope_Rep3 983.49237517859 983.49182496793 34.069 1 -1.2347881673178696 0.3682492581602374 1.0 ['ENSG00000188976|ENST00000327044|NOC2L', 'ENST00000477976.5_1_1:880076-889593:-|nuORF', 'ENST00000483767.5_1_1:880076-882054:-|nuORF', 'ENST00000452600.1_1_2:130988892-130989183:+|nuORF'] 10706 4988 CSWQDLKDFM True NCI_RA007_Epitope_Rep2 1271.53148019259 1271.52982490379 24.025 3 -1.2348454927384311 0.3682512208691352 1.0 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6'] 89811 5044 RFFPYNYHRQK True NCI_RA007_Epitope_Rep1 1554.7844152896998 1554.78277490379 23.704 3 -1.2348532928310512 0.3682512208691352 1.0 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 98864 18262 SIVEQRLEV True PC9_epitope_Rep1 1071.59242357303 1071.5913299358601 75.035 2 -1.2348891298862943 0.3682512208691352 1.0 ['ENST00000506579.5_1_5:140056223-140057407:-|nuORF'] 128675 11166 VSMDILFLFPW True H1975_Epitope_Rep1 1366.6995314938597 1366.69842993586 47.918 2 -1.2348914359309238 0.3682512208691352 1.0 ['ENST00000368102.5_1_1:159804969-159805389:-|nuORF'] 37024 14215 GVSAATFL True PC9_epitope_Rep2 764.40685464948 764.40630496793 59.945 1 -1.234964960580617 0.3682512208691352 1.0 ['nc|ENSG00000184110|Q99613-2|EIF3C', 'ENSG00000184110|ENST00000331666|EIF3C', 'ENSG00000205609|ENST00000380876|EIF3CL'] 123000 8652 VGWSDSYTCEY True PC9_epitope_Rep5 1308.49686850568 1308.4957699358602 38.223 2 -1.2350184677189662 0.3682590312291373 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 121088 16333 VGGAGLKG True NCI_RA007_Epitope_Rep1 657.38097425481 657.38042496793 67.643 1 -1.2351873615947082 0.3682902707380393 1.0 ['COL7A1|p.S2512G|1|0.27|ENSG00000114270|chr3:48569748-48569748|T/C|missense_variant'] 15182 11820 EAFEHENK True PC9_epitope_Rep3 1002.4406739589 1002.43956993586 50.483 2 -1.2351902719756391 0.3682902707380393 1.0 ['ENST00000548259.1_1_12:110930799-110939856:-|nuORF', 'ENSG00000111237|ENST00000549578|VPS29', 'nc|ENSG00000111237|Q9UBQ0-2|VPS29'] 36358 11356 GVHMWPEVC True PC9_epitope_Rep5 1056.4521076730798 1056.4510099358602 48.677 2 -1.2351910791283585 0.3682902707380393 1.0 ['ENST00000362021.8_1_11:47437008-47437206:+|nuORF'] 41633 22040 IDHPQKVL True PC9_epitope_Rep4 948.53926580136 948.53816993586 92.998 2 -1.2352017647834255 0.3682902707380393 1.0 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10'] 137903 18137 YPPFFLLL True H1975_Epitope_Rep2 1008.5684406713199 1008.56734993586 75.172 2 -1.2352690213687592 0.3683058893339267 1.0 ['ENSG00000180974|ENST00000641726|OR52E4'] 43788 14995 IKEDELRESIE True H1975_Epitope_Rep3 1359.68817443267 1359.68706993586 63.068 2 -1.2352753449012683 0.3683058893339267 1.0 ['nc|ENSG00000065154|P04181-2|OAT', 'ENSG00000065154|ENST00000368845|OAT'] 92327 17613 RQMLLCRVT True NCI_RA007_Epitope_Rep3 1118.6052542695397 1118.60414993586 77.237 2 -1.235296084795593 0.3683117653602284 1.0 ['TNKS|p.F1251L|1|0.28|ENSG00000173273|chr8:9770118-9770118|C/A|missense_variant'] 79729 20242 PHRNLQFL True PC9_epitope_Rep2 1023.5613982282699 1023.5603099358599 83.281 2 -1.2353509108628384 0.3683117653602284 1.0 ['ENST00000442697.6_1_4:100821242-100821344:-|nuORF'] 34353 7612 GPSPKQLVSL True NCI_RA007_Epitope_Rep2 1024.59169529704 1024.5905899358602 34.233 2 -1.2353783631904631 0.3683117653602284 1.0 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.R1708Afs*23|1|0.17|ENSG00000185010|chrX:154928668-154928668|G/-|frameshift_variant', 'F8|p.E1756Nfs*16|1|0.1|ENSG00000185010|chrX:154906527-154906527|C/-|frameshift_variant', 'F8|p.T1468Kfs*91|1|0.69|ENSG00000185010|chrX:154929363-154929387|CTTTGATCACCAGTCATCTCCAAGG/-|frameshift_variant'] 36442 22690 GVIIYIMKHSL True PC9_epitope_Rep4 1272.72641494804 1272.72587496793 95.505 1 -1.2353814908488383 0.3683117653602284 1.0 ['ENSG00000175283|ENST00000372586|DOLK'] 80003 17514 PKEKTTRK True NCI_RA007_Epitope_Rep4 986.58727862294 986.58673496793 75.815 1 -1.2354416745734342 0.3683117653602284 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant', 'ENST00000460841.1_1_6:31959958-31961603:+|nuORF'] 11422 18764 DFNDFIRRRFW True NCI_RA007_Epitope_Rep1 1570.77932990926 1570.77822993586 77.129 2 -1.2355053314008009 0.3683117653602284 1.0 ['ENSG00000136811|ENST00000351030|ODF2', 'nc|ENSG00000136811|Q5BJF6-7|ODF2', 'ENST00000444993.6_1_9:131218472-131219504:+|nuORF'] 120244 6901 VFPAAPGP True NCI_RA007_Epitope_Rep5 754.4013753462199 754.40026993586 33.227 2 -1.2355400620248729 0.3683117653602284 1.0 ['ENST00000252445.7_1_19:11664136-11664256:-|nuORF'] 128660 23876 VSLRRRSRFRR True PC9_epitope_Rep1 1487.9021794369498 1487.90053490379 96.64 3 -1.2356152739050281 0.3683117653602284 1.0 ['ENST00000181839.8_1_7:39989715-39990237:+|nuORF'] 69190 15447 LVMETLCIV True PC9_epitope_Rep2 1019.5395256951499 1019.53842993586 64.694 2 -1.2356190567923218 0.3683117653602284 1.0 ['ENSG00000198700|ENST00000361565|IPO9'] 36986 23360 GVRRIDREEK True PC9_epitope_Rep4 1256.6949315789595 1256.69437496793 98.111 1 -1.2356279511103274 0.3683117653602284 1.0 ['ENSG00000144655|ENST00000273153|CSRNP1'] 86816 194 QRPPLEMEKY True H1975_Epitope_Rep3 1289.6438075228898 1289.64217490379 1.0701 3 -1.2356740720381423 0.3683117653602284 1.0 ['ENST00000482587.5_3_1:179833134-179833188:-|nuORF'] 82960 12769 PWVPTPPGLW True PC9_epitope_Rep6 1148.6018660579198 1148.6002349037901 60.61 3 -1.2356843256005723 0.3683117653602284 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|4|1|sense'] 60905 20351 LKSDLFLKHKR True H1975_Epitope_Rep2 1383.83505388023 1383.83341490379 84.339 3 -1.2356937177025515 0.3683117653602284 1.0 ['nc|ENSG00000148908|O43665-2|RGS10', 'nc|ENSG00000148908|O43665-1|RGS10', 'ENSG00000148908|ENST00000369103|RGS10'] 106426 15326 SVTRTPSV True PC9_epitope_Rep2 845.4606811274899 845.45958993586 64.232 2 -1.2357134401089742 0.3683117653602284 1.0 ['ENSG00000237651|ENST00000432605|C2orf74'] 65888 12238 LSLDLHDI True PC9_epitope_Rep6 924.4916469026 924.49054993586 58.45 2 -1.2357436274860207 0.3683117653602284 1.0 ['SEMA3F-RBM6|1|fusion', 'SEMA3F-RBM6|4|fusion', 'SEMA3F-RBM6|3|fusion', 'SEMA3F-RBM6|2|fusion', 'nc|ENSG00000001617|Q13275-2|SEMA3F', 'ENSG00000001617|ENST00000002829|SEMA3F'] 98492 5739 SILDPPDQ True NCI_RA007_Epitope_Rep5 883.4287122928699 883.42760993586 28.762 2 -1.2357866681990595 0.36831957284817324 1.0 ['ENST00000492329.5_1_3:49721463-49723185:-|nuORF', 'nc|ENSG00000173531|P26927|MST1', 'ENSG00000173531|ENST00000449682|MST1'] 61786 2831 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 14.536 2 -1.2358791911325397 0.3683351872450871 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 122980 9426 VGWSDSYTCEY True PC9_epitope_Rep1 1308.49686850568 1308.4957699358602 41.115 2 -1.2358999638764516 0.3683351872450871 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 103500 12613 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 55.168 2 -1.2359572310607734 0.36835535341300935 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 4163 12586 AIALERSLT True PC9_epitope_Rep5 972.56039516876 972.55928993586 53.412 2 -1.235997759539832 0.3683631599762705 1.0 ['nc|ENSG00000180739|Q9H228-2|S1PR5', 'ENSG00000180739|ENST00000333430|S1PR5'] 14512 5162 DTYFLNDKKSF True NCI_RA007_Epitope_Rep2 1376.66123140884 1376.65957490379 24.697 3 -1.2360908130140154 0.36837877252391427 1.0 ['nc|ENSG00000166206|P28472-3|GABRB3', 'nc|ENSG00000166206|P28472-2|GABRB3', 'ENSG00000166206|ENST00000311550|GABRB3', 'GABRB1|p.L248Ffs*23|1|0.15|ENSG00000163288|chr4:47403615-47403616|-/T|frameshift_variant', 'nc|ENSG00000145864|P47870-3|GABRB2', 'nc|ENSG00000145864|P47870-4|GABRB2', 'GABRB1|p.N376Mfs*12|1|0.51|ENSG00000163288|chr4:47425717-47425717|G/-|frameshift_variant', 'nc|ENSG00000166206|P28472-4|GABRB3', 'GABRB2|p.Q336Nfs*71|1|0.17|ENSG00000145864|chr5:161330954-161330954|G/-|frameshift_variant', 'GABRB1|p.R411Afs*33|1|0.28|ENSG00000163288|chr4:47425823-47425823|C/-|frameshift_variant', 'nc|ENSG00000145864|P47870-1|GABRB2', 'ENSG00000163288|ENST00000295454|GABRB1', 'ENSG00000145864|ENST00000393959|GABRB2', 'ENST00000522758.1_1_5:160886595-160973700:-|nuORF'] 139718 9757 YTVVMDIKV True PC9_epitope_Rep2 1066.5732683515798 1066.57216993586 42.869 2 -1.2361069834068534 0.36837877252391427 1.0 ['ENSG00000116678|ENST00000349533|LEPR', 'nc|ENSG00000116678|P48357-5|LEPR', 'nc|ENSG00000116678|P48357-2|LEPR', 'nc|ENSG00000116678|P48357-4|LEPR', 'nc|ENSG00000116678|P48357-3|LEPR'] 29783 18300 FVTEEIKN True PC9_epitope_Rep3 978.5022115862998 978.50110993586 75.596 2 -1.2361364697486095 0.36838202580453805 1.0 ['ENSG00000103064|ENST00000219343|SLC7A6'] 85174 22245 QKCRLRVS True PC9_epitope_Rep5 988.5600183292798 988.55892993586 90.573 2 -1.236138536191778 0.36838202580453805 1.0 ['ENST00000479212.5_1_3:113627916-113664322:+|nuORF', 'nc|ENSG00000178075|Q8IYS0-2|GRAMD1C', 'ENSG00000178075|ENST00000358160|GRAMD1C'] 91172 9733 RLPTPEQI True PC9_epitope_Rep2 952.5341804209199 952.53308993586 42.779 2 -1.2362930453150929 0.36842235349366026 1.0 ['nc|ENSG00000174574|Q9H9L7-2|AKIRIN1', 'ENSG00000174574|ENST00000432648|AKIRIN1'] 74296 11805 NIIQEEYQEYR True H1975_Epitope_Rep1 1483.6943224422698 1483.69322993586 50.402 2 -1.236309732382077 0.36842235349366026 1.0 ['ENSG00000166938|ENST00000319212|DIS3L', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 42089 22190 IEEIRPSSV True PC9_epitope_Rep1 1028.5502244078798 1028.54912993586 90.174 2 -1.2363562321791202 0.36845487462771415 1.0 ['nc|ENSG00000054523|O60333-2|KIF1B', 'ENSG00000054523|ENST00000676179|KIF1B', 'nc|ENSG00000054523|O60333-4|KIF1B'] 126490 10249 VPMTPGTF True PC9_epitope_Rep5 848.4102257777599 848.40912993586 44.409 2 -1.2363986949760295 0.368475037073653 1.0 ['nc|ENSG00000109458|Q13480-2|GAB1', 'ENSG00000109458|ENST00000262994|GAB1'] 18212 9355 EIRLDTFFDP True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 40.892 2 -1.2364891720753348 0.36850755675288244 1.0 ['BRINP1|p.R519Q|1|0.48|ENSG00000078725|chr9:119167814-119167814|C/T|missense_variant', 'nc|ENSG00000078725|O60477-3|BRINP1', 'ENSG00000078725|ENST00000265922|BRINP1'] 66328 5873 LSQLWQNR True NCI_RA007_Epitope_Rep3 1043.55122746739 1043.55012993586 30.079 2 -1.2366307509998964 0.36855243320728603 1.0 ['nc|ENSG00000066135|O75164-2|KDM4A', 'ENSG00000066135|ENST00000372396|KDM4A', 'KDM4A|p.K655Rfs*19|1|0.25|ENSG00000066135|chr1:43689017-43689018|-/GA|frameshift_variant'] 11300 15440 DETFQEKM True PC9_epitope_Rep3 1026.4328116971399 1026.43170993586 64.543 2 -1.2366900628682835 0.3685602362739889 1.0 ['nc|ENSG00000089472|Q9BQS7-2|HEPH', 'ENSG00000089472|ENST00000343002|HEPH', 'nc|ENSG00000089472|Q9BQS7-3|HEPH', 'nc|ENSG00000089472|Q9BQS7-4|HEPH', 'HEPH|p.L447S|1|0.34|ENSG00000089472|chrX:66193609-66193609|T/C|missense_variant'] 124439 12640 VLEQITSFALG True H1975_Epitope_Rep3 1176.63903941228 1176.6379499358602 53.825 2 -1.2367145265225887 0.3685680391478424 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 4489 6253 AKIQEILQRK True NCI_RA007_Epitope_Rep3 1225.7506555499297 1225.7490149037899 31.6 3 -1.2367471886955153 0.36857128734893607 1.0 ['ENSG00000165269|ENST00000297988|AQP7'] 11022 23764 DDHYRTGTRF True NCI_RA007_Epitope_Rep5 1266.57414773994 1266.57250490379 98.756 3 -1.2367817898907003 0.36857128734893607 1.0 ['nc|ENSG00000148634|Q5GLZ8-6|HERC4', 'nc|ENSG00000148634|Q5GLZ8-3|HERC4', 'ENSG00000148634|ENST00000373700|HERC4', 'nc|ENSG00000148634|Q5GLZ8|HERC4', 'ENST00000427635.6_1_10:69747892-69752485:-|nuORF'] 27165 22942 FLSFLHPE True NCI_RA007_Epitope_Rep5 988.50181766348 988.50072993586 95.473 2 -1.2369142853270294 0.36857778326949214 1.0 ['ENST00000494748.1_1_1:1152894-1154464:-|nuORF', 'nc|ENSG00000078808|Q9BRK5-2|SDF4', 'ENST00000478938.1_1_1:1152894-1154464:-|nuORF', 'ENSG00000078808|ENST00000360001|SDF4', 'nc|ENSG00000078808|Q9BRK5|SDF4', 'ENST00000465727.5_1_1:1153052-1158671:-|nuORF', 'nc|ENSG00000078808|Q9BRK5-6|SDF4'] 81227 17202 PPLVVGFS True NCI_RA007_Epitope_Rep4 814.45889022234 814.45778993586 74.481 2 -1.2369185387881096 0.36857778326949214 1.0 ['SLC4A3|p.L762P|1|0.48|ENSG00000114923|chr2:219636395-219636395|T/C|missense_variant'] 104525 20406 SSRNVKVRYL True PC9_epitope_Rep6 1220.6989543302398 1220.6978499358602 91.191 2 -1.2369189148803004 0.36857778326949214 1.0 ['ENST00000487196.1_1_10:5800911-5803598:+|nuORF'] 112322 23665 TMKNYYRIL True NCI_RA007_Epitope_Rep3 1200.6325145632 1200.6308549037901 102.62 3 -1.2369251726959118 0.36857778326949214 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 135409 7211 YDQSQPPYYN True H1975_Epitope_Rep3 1273.5251318588498 1273.5240299358602 32.71 2 -1.2370744489314924 0.3685992068884579 1.0 ['nc|ENSG00000182333|P07098-2|LIPF', 'nc|ENSG00000182333|P07098-4|LIPF', 'ENSG00000182333|ENST00000238983|LIPF', 'nc|ENSG00000182333|P07098-3|LIPF'] 77793 14253 PAEHLEDRL True PC9_epitope_Rep4 1078.54072235334 1078.5396299358601 62.729 2 -1.237090988981579 0.3685992068884579 1.0 ['RBM15B|p.S844Pfs*27|1|0.57|ENSG00000259956|chr3:51393922-51393922|G/-|frameshift_variant', 'ENSG00000259956|ENST00000563281|RBM15B'] 131855 8699 VYDFWRMVWQE True NCI_RA007_Epitope_Rep1 1557.70747040861 1557.70636993586 37.838 2 -1.2371148408582255 0.3685992068884579 1.0 ['nc|ENSG00000060656|Q92729-3|PTPRU', 'ENSG00000060656|ENST00000373779|PTPRU', 'nc|ENSG00000060656|Q92729-4|PTPRU', 'nc|ENSG00000060656|Q92729|PTPRU'] 82737 5617 PVPVHPGGP True PC9_epitope_Rep4 855.4602872046698 855.45918993586 28.403 2 -1.237131473521967 0.3685992068884579 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 116042 11348 TVRQTIID True H1975_Epitope_Rep3 944.5290950404799 944.52798993586 48.761 2 -1.237148677655629 0.3685992068884579 1.0 ['QSOX2|p.M172I|1|0.16|ENSG00000165661|chr9:136224075-136224075|C/A|missense_variant'] 116543 9752 TYFAIDSSTG True PC9_epitope_Rep1 1060.47130538084 1060.47020993586 42.37 2 -1.2371908192330152 0.3685992068884579 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 20117 13342 ENKTIVFVETK True H1975_Epitope_Rep1 1306.7132669817 1306.7121699358602 56.427 2 -1.237214867047147 0.3685992068884579 1.0 ['ENSG00000108654|ENST00000225792|DDX5', 'nc|ENSG00000108654|P17844-2|DDX5', 'ENST00000581230.5_1_17:62498125-62502378:-|nuORF'] 84198 15877 QETKKIKITT True NCI_RA007_Epitope_Rep5 1188.7077876784397 1188.7061549037899 67.792 3 -1.2372175006802526 0.3685992068884579 1.0 ['ENST00000440835.6_1_12:71031939-71032017:-|nuORF'] 3462 9490 AGLLWLLEEMR True NCI_RA007_Epitope_Rep1 1329.7114931598899 1329.7103899358601 40.909 2 -1.2372394204628951 0.3685992068884579 1.0 ['MYH1|p.G775W|1|0.33|ENSG00000109061|chr17:10505275-10505275|C/A|missense_variant'] 137015 7675 YKLYLVRPE True NCI_RA007_Epitope_Rep4 1179.6651945904698 1179.66355490379 36.183 3 -1.2372660407522797 0.3685992068884579 1.0 ['ENSG00000090776|ENST00000204961|EFNB1'] 82337 4798 PTSLVLNGIR True NCI_RA007_Epitope_Rep4 1068.6291434349198 1068.6280499358602 24.892 2 -1.2373249015464767 0.3685992068884579 1.0 ['ENSG00000170044|ENST00000466937|ZPLD1', 'nc|ENSG00000170044|Q8TCW7-2|ZPLD1'] 49487 20005 KIYHRRLRKS True NCI_RA007_Epitope_Rep5 1355.82622053203 1355.82457490379 83.866 3 -1.2373912699161365 0.3685992068884579 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2', 'ECM2|p.F576Lfs*35|1|0.41|ENSG00000106823|chr9:92500930-92500930|A/-|frameshift_variant'] 40850 11272 HVLFKGDFRI True PC9_epitope_Rep1 1230.6873270173799 1230.68569490379 48.238 3 -1.2374035487528254 0.3685992068884579 1.0 ['ENSG00000135749|ENST00000258229|PCNX2', 'nc|ENSG00000135749|A6NKB5-4|PCNX2', 'nc|ENSG00000135749|A6NKB5-3|PCNX2'] 80102 19778 PKGSSKVKRRV True H1975_Epitope_Rep2 1240.77278797684 1240.7716899358602 82.052 2 -1.2374437560197846 0.3685992068884579 1.0 ['nc|ENSG00000184792|Q969R2-5|OSBP2', 'nc|ENSG00000184792|Q969R2-4|OSBP2', 'nc|ENSG00000184792|Q969R2-6|OSBP2', 'nc|ENSG00000184792|Q969R2-3|OSBP2', 'nc|ENSG00000184792|Q969R2-2|OSBP2', 'ENSG00000184792|ENST00000332585|OSBP2'] 34309 10708 GPPTLTALP True NCI_RA007_Epitope_Rep3 865.4909186266099 865.49037496793 49.165 1 -1.2374489421990358 0.3685992068884579 1.0 ['ENSG00000146700|ENST00000275560|SSC4D'] 78395 7428 PAVPSAPAAP True PC9_epitope_Rep6 876.4705175351999 876.46942993586 37.797 2 -1.2374778519441494 0.3685992068884579 1.0 ['ENSG00000266265|ENST00000583337|KLF14'] 127677 24511 VRFQERRP True PC9_epitope_Rep3 1086.60466002258 1086.6035699358602 99.625 2 -1.23748146241048 0.3685992068884579 1.0 ['ENST00000477267.1_1_10:102824694-102827451:+|nuORF', 'ENST00000465807.1_1_10:102826065-102827451:+|nuORF'] 98345 19441 SIGTM[Oxidation]VEKL True PC9_epitope_Rep5 992.5212331591599 992.52012993586 79.831 2 -1.2375543546927599 0.36860245339658304 1.0 ['ENSG00000027001|ENST00000382172|MIPEP'] 47131 14498 IWEIHQKMRI True PC9_epitope_Rep5 1352.7387109672397 1352.73760993586 60.766 2 -1.2375595428734025 0.36860245339658304 1.0 ['ENST00000496874.1_1_16:304458-304518:+|nuORF'] 12784 9361 DLIEKLLNYAP True H1975_Epitope_Rep3 1287.7074533252699 1287.70579490379 41.007 3 -1.2376340621128596 0.36860569974428975 1.0 ['ENSG00000177700|ENST00000322028|POLR2L'] 5388 10806 ALVGTQDRIS True PC9_epitope_Rep3 1058.57202248162 1058.57092993586 46.532 2 -1.2376545825578726 0.36860569974428975 1.0 ['nc|ENSG00000135439|Q99490|AGAP2', 'ENSG00000135439|ENST00000547588|AGAP2', 'nc|ENSG00000135439|Q99490-2|AGAP2'] 12962 11367 DLPEQVPE True H1975_Epitope_Rep3 925.4392769765699 925.43872496793 48.835 1 -1.2376886723865093 0.36861349935764404 1.0 ['nc|ENSG00000172164|Q13884-2|SNTB1', 'ENSG00000172164|ENST00000517992|SNTB1'] 25947 18192 FGSAKVIRSL True PC9_epitope_Rep5 1076.63422881536 1076.63312993586 74.985 2 -1.2377337418158891 0.3686290980062752 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 127768 16551 VRKKRRGFSEI True NCI_RA007_Epitope_Rep2 1374.8208007984197 1374.8191649037901 69.109 3 -1.237738742561282 0.3686290980062752 1.0 ['ENST00000480842.1_1_6:160211577-160211676:+|nuORF'] 13786 14161 DQSAYVSAI True PC9_epitope_Rep5 952.4501760134399 952.44906993586 59.481 2 -1.2378877852160963 0.3686524945341354 1.0 ['ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'nc|ENSG00000290798|Q9H1B4-5|NXF5', 'nc|ENSG00000290798|Q9H1B4-4|NXF5', 'nc|ENSG00000290798|Q9H1B4-6|NXF5', 'nc|ENSG00000290798|Q9H1B4-2|NXF5', 'nc|ENSG00000290798|Q9H1B4|NXF5'] 78923 20940 PFEDALRVP True PC9_epitope_Rep4 1042.54474510462 1042.54364993586 88.705 2 -1.2379137857297198 0.3686524945341354 1.0 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1'] 79732 17650 PHRRQDPK True PC9_epitope_Rep2 1032.5577098301599 1032.55660993586 73.17 2 -1.2379143799176187 0.3686524945341354 1.0 ['ENST00000398495.6_1_18:47803541-47806282:-|nuORF'] 79108 20846 PFYKQYPFLWP True PC9_epitope_Rep1 1484.7492585675998 1484.74816993586 85.01 2 -1.2379931512367346 0.3686589839552377 1.0 ['nc|ENSG00000240891|Q0VAA5-2|PLCXD2', 'nc|ENSG00000240891|Q0VAA5|PLCXD2', 'ENSG00000240891|ENST00000636933|PLCXD2'] 128203 10778 VRVFRDSPNS True NCI_RA007_Epitope_Rep4 1175.60471959223 1175.60362993586 48.306 2 -1.2380095465172254 0.3686589839552377 1.0 ['ENST00000513207.2_1_11:78140762-78140879:-|nuORF'] 26880 10301 FLFFYICR True NCI_RA007_Epitope_Rep3 1107.5575587177898 1107.5564699358602 47.589 2 -1.2380194133180087 0.3686589839552377 1.0 ['chr3:121938530-121939349|399|11.42|0.04|8.21|+|0|TE_info:L1PA3,L1PA3_dup2051,L1,LINE,donor,-,121932761,121938530|None,SLC15A2|85', 'chr3:121938445-121939349|375|11.28|0.04|8.23|+|1|TE_info:L1PA3,L1PA3_dup2051,L1,LINE,donor,-,121932761,121938445|None,SLC15A2|85'] 117202 6865 TYTFSLEGSG True NCI_RA007_Epitope_Rep4 1060.47130538084 1060.47020993586 33.025 2 -1.2380208502013494 0.3686589839552377 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 30868 21154 GARHGRGG True PC9_epitope_Rep5 766.3946672563399 766.39411496793 86.422 1 -1.2380716878266036 0.3686622284253301 1.0 ['ENST00000269221.7_1_18:21083527-21083671:+|nuORF', 'ENST00000294309.7_2_11:68855463-68855787:+|nuORF'] 110909 9801 TLAPPGCH True PC9_epitope_Rep5 794.37450897538 794.37340993586 42.668 2 -1.2380822350095588 0.3686622284253301 1.0 ['ENSG00000119943|ENST00000370575|PYROXD2'] 13377 7552 DNEVEDCLT True H1975_Epitope_Rep3 1036.4019054916798 1036.40080993586 34.03 2 -1.2381282769605322 0.3686901747668746 1.0 ['ENSG00000180644|ENST00000441259|PRF1'] 64304 11802 LQLYQWGVP True PC9_epitope_Rep2 1102.58113061334 1102.58002993586 50.727 2 -1.2381315268017643 0.3686901747668746 1.0 ['ENSG00000168016|ENST00000645898|TRANK1'] 83331 17343 QALWFWDSMLK True H1975_Epitope_Rep1 1423.69584309575 1423.69474993586 72.176 2 -1.2381987551445675 0.36869210818821785 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6'] 44014 24438 ILKARRVPAHG True H1975_Epitope_Rep3 1216.7516586094398 1216.75056993586 101.73 2 -1.23825665741193 0.36869210818821785 1.0 ['ENSG00000132467|ENST00000254803|UTP3'] 7784 8965 ASVPNLSSR True PC9_epitope_Rep1 929.4930438849301 929.49194993586 39.329 2 -1.2382710418793623 0.36869210818821785 1.0 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 34156 7175 GPEPLSHFE True PC9_epitope_Rep5 1011.46616043075 1011.46506993586 32.565 2 -1.2382737552289902 0.36869210818821785 1.0 ['ENSG00000007047|ENST00000262891|MARK4'] 82237 12910 PTIVEREP True PC9_epitope_Rep1 939.5025459394699 939.50144993586 54.531 2 -1.2382905373043869 0.36869210818821785 1.0 ['nc|ENSG00000143870|Q15084-3|PDIA6', 'ENSG00000143870|ENST00000272227|PDIA6', 'nc|ENSG00000143870|Q15084-4|PDIA6', 'nc|ENSG00000143870|Q15084-5|PDIA6', 'nc|ENSG00000143870|Q15084-2|PDIA6'] 29253 13231 FVDFCYSSIIA True NCI_RA007_Epitope_Rep2 1263.58456131127 1263.5834699358602 56.099 2 -1.2383208543021422 0.368699904904225 1.0 ['OR5D16|p.L287Vfs*11|1|0.12|ENSG00000205029|chr11:55839602-55839603|-/C|frameshift_variant', 'ENSG00000205029|ENST00000378396|OR5D16', 'ENSG00000186119|ENST00000333976|OR5D18'] 22535 6596 ETLIAFMVK True H1975_Epitope_Rep3 1050.5783537320199 1050.5772499358602 30.325 2 -1.238349632230013 0.3687031479629012 1.0 ['ENST00000296885.7_1_6:88117749-88144792:+|nuORF', 'ENSG00000272514|ENST00000369562|CFAP206', 'CFAP206|p.V40I|1|0.16|ENSG00000272514|chr6:87410594-87410594|G/A|missense_variant'] 122987 8917 VGWSDSYTCEY True PC9_epitope_Rep3 1308.49686850568 1308.4957699358602 39.251 2 -1.2383622041289213 0.3687031479629012 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 91059 20358 RLLGIPLL True PC9_epitope_Rep2 893.6062231623699 893.60512993586 83.729 2 -1.2384136170101476 0.36870639086137696 1.0 ['ENSG00000154114|ENST00000683345|TBCEL'] 867 4689 ADKPETTK True NCI_RA007_Epitope_Rep3 888.45526139388 888.45416993586 25.389 2 -1.2384228245806768 0.36870639086137696 1.0 ['ENSG00000228278|ENST00000431067|ORM2', 'ENSG00000229314|ENST00000259396|ORM1'] 28759 24071 FTAPLVVFHLN True PC9_epitope_Rep2 1256.6917436914798 1256.6906499358602 98.091 2 -1.2384383392122218 0.3687265362576566 1.0 ['TRPM2|p.V796L|1|0.26|ENSG00000142185|chr21:44401745-44401745|G/T|missense_variant'] 87205 12438 QSLYLHRYYFE True H1975_Epitope_Rep1 1517.73031402817 1517.7292099358601 52.88 2 -1.2384603810108714 0.3687362623792942 1.0 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 116200 3756 TVTQEKSP True NCI_RA007_Epitope_Rep4 888.4552613938798 888.45416993586 20.61 2 -1.2385017413485564 0.3687362623792942 1.0 ['MDGA2|p.P516T|1|0.25|ENSG00000139915|chr14:47035284-47035284|G/T|missense_variant'] 43834 18410 ILADEARYSSM True NCI_RA007_Epitope_Rep1 1254.59143759686 1254.59034993586 75.746 2 -1.2385580755906724 0.3687362623792942 1.0 ['ENST00000505295.1_1_5:80540896-80542784:-|nuORF'] 140029 11751 YVLLASEQL True PC9_epitope_Rep6 1034.5648118428599 1034.56370993586 56.359 2 -1.2385714944217565 0.3687362623792942 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 57403 17857 LEHYKDPSL True PC9_epitope_Rep5 1100.55022440788 1100.54912993586 73.705 2 -1.2385784391628176 0.3687362623792942 1.0 ['SOCS5|p.S464L|1|0.27|ENSG00000171150|chr2:46759921-46759921|C/T|missense_variant'] 19251 15323 ELLFWTIK True PC9_epitope_Rep2 1048.59571804832 1048.5946299358602 64.221 2 -1.2385784406175682 0.3687362623792942 1.0 ['ENSG00000144357|ENST00000272793|UBR3', 'nc|ENSG00000144357|Q6ZT12-4|UBR3'] 104379 8657 SSGERWIRY True NCI_RA007_Epitope_Rep1 1152.5676058075198 1152.56650993586 37.677 2 -1.238641584329008 0.3687687539360113 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 935 9028 ADTAGFLHSS True NCI_RA007_Epitope_Rep5 1004.45632402304 1004.45522993586 41.383 2 -1.2387447539296463 0.3687765484540156 1.0 ['ULK1-FBXW8|1|fusion', 'ENSG00000177169|ENST00000321867|ULK1'] 4552 18832 AKVIRSLHGR True NCI_RA007_Epitope_Rep4 1135.69380938015 1135.6927099358602 81.461 2 -1.2388156270400477 0.3687843427795271 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 80247 9536 PLDALEPQ True PC9_epitope_Rep5 881.4494477374501 881.44834993586 41.639 2 -1.2389097330262386 0.36880448472575506 1.0 ['ENSG00000255423|ENST00000533473|EBLN2'] 33016 10623 GIWYWFDPEM True H1975_Epitope_Rep1 1342.5692456003 1342.5681499358602 45.818 2 -1.2390294032280844 0.36882462617457124 1.0 ['ENSG00000109163|ENST00000226413|GNRHR'] 58455 10452 LEWRTGAI True NCI_RA007_Epitope_Rep5 944.5079656730799 944.50686993586 46.835 2 -1.2390618652336312 0.3688278655126005 1.0 ['ENSG00000139531|ENST00000266971|SUOX'] 650 7476 AATLDVLSEH True H1975_Epitope_Rep2 1054.5294889633 1054.52838993586 33.704 2 -1.2390703468001414 0.3688278655126005 1.0 ['chr1:42927808-42929210|431|61.41|0.67|6.52|-|2|SLC2A1,SLC2A1|1'] 673 11324 AAVAKKLG True PC9_epitope_Rep3 756.4857736765199 756.48466993586 48.564 2 -1.2391444308903632 0.368860353130016 1.0 ['ENSG00000143318|ENST00000368078|CASQ1'] 96986 5896 SEVLPNLTVQE True PC9_epitope_Rep1 1227.63468230783 1227.63304490379 27.495 3 -1.2391650377636372 0.3688622754491018 1.0 ['CHRD|p.A360S|1|0.14|ENSG00000090539|chr3:184383028-184383028|G/T|missense_variant'] 55424 8262 LATKMEYFYWR True NCI_RA007_Epitope_Rep1 1506.7329568804598 1506.73184993586 36.136 2 -1.2391800712194703 0.3688622754491018 1.0 ['ENST00000496711.5_1_9:130118742-130126953:+|nuORF'] 62486 8842 LLSPHSKGSTD True H1975_Epitope_Rep3 1140.57750178488 1140.57640993586 39.017 2 -1.239187046277771 0.3688622754491018 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2'] 12388 4296 DKDFLWSHRHY True NCI_RA007_Epitope_Rep2 1502.70549626266 1502.70385490379 21.349 3 -1.2391994741427705 0.3688622754491018 1.0 ['PIK3CA|p.E547D|1|0.36|ENSG00000121879|chr3:179218311-179218311|G/C|missense_variant'] 110897 18145 TLALGRPVI True PC9_epitope_Rep1 938.5913013742199 938.59020993586 74.585 2 -1.239213616898127 0.3688622754491018 1.0 ['ENST00000507522.1_1_5:253163-256532:+|nuORF'] 12269 10163 DISARLWFTY True NCI_RA007_Epitope_Rep1 1270.63462273818 1270.63352993586 43.543 2 -1.2393698436532903 0.36890710652377895 1.0 ['nc|ENSG00000101844|Q8WYN0-2|ATG4A', 'ENSG00000101844|ENST00000372232|ATG4A'] 101435 2425 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 13.262 2 -1.2394767498849235 0.3689428264546476 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 89865 14258 RFLSRFKTR True NCI_RA007_Epitope_Rep3 1209.70945944429 1209.70780490379 63.4 3 -1.2395016834743304 0.3689428264546476 1.0 ['ENST00000557388.1_1_14:67864733-67878776:-|nuORF'] 80662 23003 PLPPQPQNGL True PC9_epitope_Rep2 1059.57129420563 1059.57018993586 93.974 2 -1.2395040947279157 0.3689428264546476 1.0 ['ENSG00000275023|ENST00000621332|MLLT6'] 81935 19624 PSPPKAFAV True PC9_epitope_Rep2 912.5069030439199 912.50580993586 80.868 2 -1.2395884247128641 0.3689753086419753 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 77161 4498 NYFEGTGY True PC9_epitope_Rep2 949.3817621004498 949.3806699358599 22.658 2 -1.2396473592439918 0.3689772236281711 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 16589 20300 EERMRRLFQT True H1975_Epitope_Rep1 1364.6983027072397 1364.6972099358602 84.433 2 -1.2396996117370815 0.3689772236281711 1.0 ['ENST00000511242.1_1_5:112783941-112824318:-|nuORF', 'ENSG00000171444|ENST00000408903|MCC'] 62415 11215 LLRYLLDRDDP True H1975_Epitope_Rep3 1387.7459640923098 1387.7448699358602 48.238 2 -1.239721222783804 0.3689772236281711 1.0 ['NCOA3-EYA2|1|fusion', 'NCOA3-EYA2|5|fusion', 'NCOA3-EYA2|7|fusion', 'NCOA3-EYA2|3|fusion', 'NCOA3-EYA2|2|fusion', 'NCOA3-EYA2|6|fusion', 'NCOA3-EYA2|8|fusion', 'NCOA3-EYA2|4|fusion', 'ENSG00000124151|ENST00000371998|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-5|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-3|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-2|NCOA3', 'nc|ENSG00000124151|Q9Y6Q9-4|NCOA3'] 28179 24434 FRNLRKQRIEI True PC9_epitope_Rep2 1471.8735646472699 1471.87192490379 99.56 3 -1.239751085474039 0.3689772236281711 1.0 ['nc|ENSG00000120251|P42262-4|GRIA2', 'nc|ENSG00000120251|P42262-2|GRIA2', 'ENSG00000120251|ENST00000264426|GRIA2', 'nc|ENSG00000120251|P42262-3|GRIA2', 'ENST00000471736.5_1_4:158142110-158255356:+|nuORF', 'GRIA2|p.W547*|1|0.24|ENSG00000120251|chr4:157336543-157336543|G/-|frameshift_variant'] 73216 8744 NEGRRAVSVHE True NCI_RA007_Epitope_Rep2 1252.62724594196 1252.6261499358602 38.658 2 -1.2397660231182377 0.3689772236281711 1.0 ['ENST00000602368.1_3_16:67688780-67691418:+|nuORF'] 80153 22325 PKRRNRKKKKK True PC9_epitope_Rep1 1465.9793671284895 1465.97826993586 90.687 2 -1.2398655938190073 0.36901293699387716 1.0 ['SF3B2|p.R325P|1|0.05|ENSG00000087365|chr11:66058837-66058837|G/C|missense_variant'] 14163 16633 DSLVSLMM True H1975_Epitope_Rep2 894.4190762093 894.41796993586 69.21 2 -1.2398677087108552 0.36901293699387716 1.0 ['ENST00000496846.1_1_7:30411448-30411829:+|nuORF'] 74332 22394 NIPFDELKNYL True H1975_Epitope_Rep1 1364.6976169175598 1364.6965099358601 93.17 2 -1.2399229322330843 0.36901293699387716 1.0 ['ENSG00000253710|ENST00000521508|ALG11'] 77058 7484 NWAAEFAEL True PC9_epitope_Rep4 1049.48181049489 1049.4807099358602 36.148 2 -1.2399717778469268 0.3690207260921626 1.0 ['nc|ENSG00000127946|O00291-3|HIP1', 'ENSG00000127946|ENST00000336926|HIP1', 'nc|ENSG00000127946|O00291-4|HIP1'] 41409 7546 IASAGPAAAV True PC9_epitope_Rep2 826.45486747106 826.45376993586 34.391 2 -1.2400820467881513 0.3690239597091753 1.0 ['ENSG00000163735|ENST00000296027|CXCL5'] 134375 19823 WSLSYIFFP True NCI_RA007_Epitope_Rep1 1158.57498260374 1158.57334490379 81.314 3 -1.2401036976951438 0.3690239597091753 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 100084 17716 SLKRWTWR True H1975_Epitope_Rep1 1131.63014649443 1131.6290499358602 73.736 2 -1.2402298150620807 0.3690427698574338 1.0 ['ENST00000437348.5_1_11:31115730-31149186:-|nuORF'] 81041 5791 PPAEDSQK True H1975_Epitope_Rep3 870.4083112014599 870.40720993586 27.299 2 -1.2403355501144213 0.3690427698574338 1.0 ['ENST00000523948.5_1_8:56686169-56737149:+|nuORF', 'ENSG00000137574|ENST00000260129|TGS1'] 124965 15078 VLNATLKQL True PC9_epitope_Rep1 998.6124307416198 998.61132993586 62.816 2 -1.2403590392861428 0.3690427698574338 1.0 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 80104 21384 PKGSSKVKRRV True PC9_epitope_Rep6 1240.77278797684 1240.7716899358602 95.127 2 -1.2404102334547866 0.3690427698574338 1.0 ['nc|ENSG00000184792|Q969R2-5|OSBP2', 'nc|ENSG00000184792|Q969R2-4|OSBP2', 'nc|ENSG00000184792|Q969R2-6|OSBP2', 'nc|ENSG00000184792|Q969R2-3|OSBP2', 'nc|ENSG00000184792|Q969R2-2|OSBP2', 'ENSG00000184792|ENST00000332585|OSBP2'] 111474 17514 TLLHHFRP True PC9_epitope_Rep1 1019.56648360871 1019.56538993586 72.161 2 -1.240464566556869 0.3690460026907933 1.0 ['nc|ENSG00000101276|Q9NQ40-2|SLC52A3', 'ENSG00000101276|ENST00000645534|SLC52A3'] 8762 5818 AVEEYVYDFRD True H1975_Epitope_Rep1 1404.6197605196796 1404.61866993586 27.451 2 -1.2404800477051972 0.3690460026907933 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 55948 9401 LDHPRIIK True PC9_epitope_Rep2 990.5974493838199 990.59634993586 41.5 2 -1.240542452027022 0.36907392093212704 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 31308 8413 GDYYLSAKI True H1975_Epitope_Rep1 1028.51786165044 1028.51676993586 37.288 2 -1.2405550947231139 0.36907392093212704 1.0 ['RGS22|p.E472K|1|0.14|ENSG00000132554|chr8:100062691-100062691|C/T|missense_variant'] 38306 7485 HFPRKHLK True NCI_RA007_Epitope_Rep4 1061.6246671911697 1061.6235699358601 35.436 2 -1.2405775249994764 0.36907715283691883 1.0 ['ENST00000361804.4_1_10:112361586-112361631:+|nuORF'] 79413 21942 PGMVAHAS True H1975_Epitope_Rep2 768.35885891124 768.35776993586 90.723 2 -1.2406007925548608 0.36907715283691883 1.0 ['ENST00000295628.3_1_3:120045250-120045442:-|nuORF'] 130503 12415 VTVTVCRSF True PC9_epitope_Rep2 1010.52190148506 1010.52080993586 53.061 2 -1.2407086274731187 0.36909728221964405 1.0 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 86412 18234 QQPLKYPLLIW True NCI_RA007_Epitope_Rep4 1397.8071077968898 1397.80546490379 78.888 3 -1.24085821995614 0.3691050689310443 1.0 ['ENST00000461745.5_2_3:77089697-77089820:+|nuORF'] 111592 9088 TLNKTDDV True PC9_epitope_Rep5 904.4501760134399 904.44906993586 39.904 2 -1.240925403903105 0.369112855450237 1.0 ['ENST00000225941.5_1_17:47300279-47300378:+|nuORF'] 16491 13833 EEMLLKHLQRM True PC9_epitope_Rep6 1426.7424760183399 1426.7413699358601 65.016 2 -1.2410191738064855 0.36912064177722925 1.0 ['ENSG00000064115|ENST00000343028|TM7SF3'] 36883 16992 GVQNITAA True NCI_RA007_Epitope_Rep4 772.40791727864 772.4073649679301 73.638 1 -1.2410373638933865 0.36912387228948373 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 56163 20344 LDNLKIRDVEK True PC9_epitope_Rep1 1341.7616141564497 1341.76050993586 83.085 2 -1.2410538801019866 0.36912387228948373 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000590806.5_1_19:10922561-10941720:+|nuORF', 'ENST00000590787.1_1_19:10922561-10934848:+|nuORF'] 41511 15368 IDALQYKL True PC9_epitope_Rep2 962.5436824754601 962.54258993586 64.396 2 -1.2410756412003694 0.3691316581922299 1.0 ['ENSG00000084674|ENST00000233242|APOB'] 85481 8610 QLHTLQKLRMD True H1975_Epitope_Rep1 1381.75000392693 1381.7483549037902 38.045 3 -1.2411471185569591 0.3691641264238729 1.0 ['ENSG00000135090|ENST00000392533|TAOK3'] 93657 17152 RTFLRPIT True NCI_RA007_Epitope_Rep5 1002.5974493838198 1002.59634993586 72.745 2 -1.2412438827683423 0.3692089349623596 1.0 ['ENST00000416928.6_1_2:177041212-177041380:-|nuORF'] 66140 14936 LSPDLSHTTL True PC9_epitope_Rep1 1082.56078909158 1082.5596899358602 62.274 2 -1.241297543964588 0.369229060483025 1.0 ['ENSG00000198734|ENST00000367797|F5'] 110602 12089 TISWEKRTK True PC9_epitope_Rep2 1147.63495709135 1147.63386993586 51.809 2 -1.2413699509220582 0.3692322880801649 1.0 ['ENST00000312858.9_3_14:76644237-76662256:+|nuORF'] 38297 9761 HFLQHPWEV True NCI_RA007_Epitope_Rep4 1191.58252759567 1191.5808749037901 44.394 3 -1.2413990757746887 0.3692322880801649 1.0 ['ENST00000489520.2_1_12:66151931-66152630:-|nuORF'] 58544 12164 LFDLIESMLEY True NCI_RA007_Epitope_Rep2 1371.6632055547902 1371.6621099358601 51.911 2 -1.2414770792379204 0.36925241256756425 1.0 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF', 'ENSG00000176444|ENST00000368361|CLK2', 'nc|ENSG00000176444|P49760-3|CLK2'] 73692 17235 NGRIVYIC True NCI_RA007_Epitope_Rep1 936.48512205352 936.48402993586 71.171 2 -1.2416027987713307 0.36929721725180475 1.0 ['nc|ENSG00000159899|P20594-2|NPR2', 'ENSG00000159899|ENST00000342694|NPR2'] 111359 11957 TLILLWRPP True H1975_Epitope_Rep1 1107.68045073179 1107.67934993586 50.997 2 -1.241663884099701 0.3693036686040055 1.0 ['ENST00000472424.1_1_1:82447641-82450328:+|nuORF'] 90308 22207 RHYDQDYY True PC9_epitope_Rep3 1158.47303671634 1158.47140490379 90.706 3 -1.2417045853314572 0.3693036686040055 1.0 ['ENSG00000065526|ENST00000375759|SPEN', 'ENST00000471538.1_1_1:16200459-16203174:+|nuORF'] 31256 24451 GDQSERRW True NCI_RA007_Epitope_Rep1 1032.4737054226798 1032.4726099358602 101.31 2 -1.2417068101675965 0.3693036686040055 1.0 ['ENST00000420509.1_1_2:206949336-206950832:+|nuORF'] 90757 23500 RKRESKILASF True PC9_epitope_Rep5 1333.78301830737 1333.7813849037902 95.374 3 -1.2417147819573053 0.3693036686040055 1.0 ['ENSG00000189134|ENST00000343684|NKAPL'] 134203 3086 WRPKDCKPRWK True NCI_RA007_Epitope_Rep1 1498.7979571788599 1498.79577987172 15.887 4 -1.2418637613681036 0.3693731490621915 1.0 ['ENSG00000118276|ENST00000306851|B4GALT6', 'nc|ENSG00000118276|Q9UBX8-2|B4GALT6'] 73666 17038 NGLTRHRR True NCI_RA007_Epitope_Rep3 1008.5689432202 1008.56784993586 74.882 2 -1.2419130624279218 0.3693809306400464 1.0 ['nc|ENSG00000235109|Q96LW9-2|ZSCAN31', 'ENSG00000235109|ENST00000344279|ZSCAN31'] 73652 23305 NGKVILFFFF True PC9_epitope_Rep2 1230.6801163786197 1230.67846490379 95.124 3 -1.2419161492860986 0.3693841540910381 1.0 ['ENST00000253039.8_1_X:24094929-24095118:+|nuORF'] 111703 12191 TLPQYMNLLI True PC9_epitope_Rep2 1204.65258130144 1204.6509449037899 52.206 3 -1.2419242344034052 0.3693841540910381 1.0 ['ENST00000369044.1_1_6:107100238-107100431:+|nuORF'] 61781 2487 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 12.847 2 -1.2419988961736548 0.3694243938552656 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 32912 13632 GIPANRIVL True PC9_epitope_Rep6 951.5865503469499 951.58544993586 64.204 2 -1.2420251266141846 0.3694243938552656 1.0 ['ENSG00000011009|ENST00000374514|LYPLA2'] 95780 21990 SDDDDDDDD True PC9_epitope_Rep6 1025.2581372786099 1025.25704993586 97.506 2 -1.2421589421491164 0.3694573987711896 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'ENST00000524979.1_1_11:108739044-108811147:+|nuORF', 'nc|ENSG00000105176|O94763-2|URI1', 'nc|ENSG00000105176|O94763-4|URI1', 'nc|ENSG00000105176|O94763-3|URI1', 'ENSG00000105176|ENST00000392271|URI1', 'PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion', 'nc|ENSG00000182621|Q9NQ66-2|PLCB1', 'ENSG00000182621|ENST00000338037|PLCB1', 'ENSG00000178105|ENST00000322536|DDX10'] 118323 12724 VDELYREAPID True H1975_Epitope_Rep3 1318.6404959642598 1318.6393899358602 54.153 2 -1.242164432068718 0.3694573987711896 1.0 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A'] 48253 9251 KDFYALYPTLQ True NCI_RA007_Epitope_Rep2 1357.6918032611297 1357.69070993586 40.593 2 -1.242218196582591 0.3694573987711896 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13'] 101187 11195 SLVTEEIVNVH True PC9_epitope_Rep3 1238.6506667251401 1238.64901490379 48.066 3 -1.2422276698740264 0.3694573987711896 1.0 ['nc|ENSG00000151422|P16591-2|FER', 'ENSG00000151422|ENST00000281092|FER'] 66763 14303 LSTYGKAPF True PC9_epitope_Rep4 982.5123823471798 982.51128993586 62.917 2 -1.2423118315028439 0.3694573987711896 1.0 ['BRWD1|p.R2102S|1|0.23|ENSG00000185658|chr21:39196763-39196763|C/G|missense_variant'] 53166 15710 KSRQKTRP True NCI_RA007_Epitope_Rep3 999.5937609857099 999.59266993586 69.435 2 -1.242317600207768 0.3694573987711896 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 111436 6557 TLKQGDKEIGP True H1975_Epitope_Rep1 1184.6401020414398 1184.63900993586 30.279 2 -1.242359610758378 0.3694573987711896 1.0 ['nc|ENSG00000133135|Q8TEB7-2|RNF128', 'ENSG00000133135|ENST00000255499|RNF128'] 100696 12514 SLRDLQEL True PC9_epitope_Rep1 972.52400966004 972.52290993586 53.003 2 -1.242381758434386 0.3694573987711896 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19'] 29902 9575 FWDQWYLWYLR True NCI_RA007_Epitope_Rep1 1674.7983340183398 1674.79722993586 41.243 2 -1.242393167173611 0.3694573987711896 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 110398 19663 TILTVTKFRG True NCI_RA007_Epitope_Rep3 1134.67609362734 1134.6744449037901 85.753 3 -1.2424398190089332 0.36947617755187645 1.0 ['ENSG00000187554|ENST00000642603|TLR5'] 12172 13367 DIKQERDQLLN True PC9_epitope_Rep3 1370.7153922400198 1370.71428993586 56.448 2 -1.2424514242041242 0.36947617755187645 1.0 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158', 'ENST00000504667.2_1_4:77274263-77288776:-|nuORF'] 98485 11478 SILACKRTEV True PC9_epitope_Rep6 1118.61177911862 1118.6106899358601 55.221 2 -1.242455453764989 0.36947617755187645 1.0 ['ENST00000319770.7_1_12:6776349-6776460:-|nuORF'] 103507 14593 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 62.801 2 -1.2424980421487526 0.36947617755187645 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 118298 10499 VDAVKLHNEL True PC9_epitope_Rep5 1136.61897267404 1136.61733490379 45.371 3 -1.2425422355777707 0.3694839561307196 1.0 ['ENSG00000052749|ENST00000370992|RRP12', 'nc|ENSG00000052749|Q5JTH9-2|RRP12', 'nc|ENSG00000052749|Q5JTH9-3|RRP12'] 112508 4567 TNVSILDLCYT True NCI_RA007_Epitope_Rep2 1240.6009396513998 1240.5998499358602 22.394 2 -1.2426000979268275 0.3694917345176413 1.0 ['OR2B3|p.L66V|1|0.11|ENSG00000204703|chr6:29087053-29087053|G/C|missense_variant'] 7247 17424 ARKFFLFYRQ True NCI_RA007_Epitope_Rep3 1374.7560752835398 1374.7549699358601 76.448 2 -1.242645578274418 0.3694995127126485 1.0 ['nc|ENSG00000103599|Q86VS3-4|IQCH', 'nc|ENSG00000103599|Q86VS3-2|IQCH', 'ENSG00000103599|ENST00000335894|IQCH', 'nc|ENSG00000103599|Q86VS3-3|IQCH'] 37404 5035 GVYNSAEQLFH True NCI_RA007_Epitope_Rep4 1263.58840082175 1263.58730993586 25.858 2 -1.2427047225539387 0.3695196269522094 1.0 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1'] 39741 19559 HPYGHRKFI True PC9_epitope_Rep2 1153.61449643029 1153.6133899358601 80.615 2 -1.2427096348029947 0.3695228461462548 1.0 ['ENSG00000140526|ENST00000352732|ABHD2'] 118049 22264 VATISPRR True PC9_epitope_Rep5 898.53484912726 898.53374993586 90.645 2 -1.2427298841207042 0.3695228461462548 1.0 ['ENSG00000146216|ENST00000259750|TTBK1'] 77711 5480 PAAGKGAVR True PC9_epitope_Rep1 825.48208527841 825.48098993586 25.909 2 -1.2428333428926472 0.3695552951335348 1.0 ['ENST00000394071.6_2_14:74184720-74184954:-|nuORF'] 74665 19864 NLGQRDLPV True PC9_epitope_Rep5 1010.5508931142198 1010.54978993586 81.457 2 -1.2428952515007852 0.36957084880407565 1.0 ['ITGAX|p.A1025Cfs*9|1|0.25|ENSG00000140678|chr16:31380275-31380276|-/T|frameshift_variant', 'ENSG00000140678|ENST00000268296|ITGAX'] 48259 13366 KDHRRKLST True NCI_RA007_Epitope_Rep5 1139.65233849099 1139.65069490379 58.098 3 -1.242919569436948 0.36957084880407565 1.0 ['PREX1|p.R431H|1|0.43|ENSG00000124126|chr20:48688699-48688699|C/T|missense_variant'] 126222 13900 VPGTLLPR True H1975_Epitope_Rep3 851.52288746123 851.5217899358599 58.778 2 -1.2429725121781117 0.3695850601934083 1.0 ['ENSG00000186063|ENST00000340020|AIDA'] 129009 19541 VSYRLLLWGR True PC9_epitope_Rep1 1261.7295261825298 1261.72789490379 79.987 3 -1.2429829202727685 0.3695850601934083 1.0 ['ENSG00000135972|ENST00000258455|MRPS9'] 45850 7830 ISQGFDISQVL True H1975_Epitope_Rep1 1205.62920300457 1205.62810993586 35.068 2 -1.2430146318607325 0.3695850601934083 1.0 ['nc|ENSG00000074803|Q13621-3|SLC12A1', 'ENSG00000074803|ENST00000380993|SLC12A1'] 118956 20855 VEEVKLLLHMW True PC9_epitope_Rep1 1395.7584433523098 1395.75734993586 85.044 2 -1.243030512568117 0.3695850601934083 1.0 ['ENSG00000108021|ENST00000695737|TASOR2'] 6634 23188 APYKYPLNRK True PC9_epitope_Rep3 1248.69789170108 1248.6967899358601 94.463 2 -1.2430340334747125 0.3695850601934083 1.0 ['ENSG00000166261|ENST00000530393|ZNF202', 'nc|ENSG00000166261|O95125-2|ZNF202'] 42712 17200 IEYIRQGSL True PC9_epitope_Rep2 1077.5818588893299 1077.5807699358602 71.418 2 -1.2430762529914088 0.3695928360859966 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27', 'SENP2-ANKRD27|1|fusion'] 126612 18902 VPPPRFRPRYR True NCI_RA007_Epitope_Rep2 1439.8262205320298 1439.82512993586 78.356 2 -1.243152148926252 0.36963305581251926 1.0 ['ENSG00000006047|ENST00000007699|YBX2'] 13317 12895 DLYRWKMVDHY True H1975_Epitope_Rep3 1524.71836944548 1524.71726993586 54.826 2 -1.2432574360634068 0.36963305581251926 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 130307 16496 VTTLLTTI True PC9_epitope_Rep4 860.5218844017201 860.5213349679301 71.421 1 -1.2432729937371743 0.36965316493166905 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A', 'MUC3A|p.S2662Ffs*13|3|0.16|ENSG00000169894|chr7:100959764-100959764|C/-|frameshift_variant', 'MUC3A|p.T2783Hfs*2|1|0.21|ENSG00000169894|chr7:100960120-100960121|-/C|frameshift_variant'] 70648 11453 MCIMCRFVT True PC9_epitope_Rep5 1102.4795853742198 1102.4784899358601 49.051 2 -1.243455392393448 0.369710275417196 1.0 ['chr5:90822097-90965415|264|32.48|0.18|7.5|+|2|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|2'] 105879 4777 SVLAELRR True NCI_RA007_Epitope_Rep5 942.5610638751 942.55996993586 25.058 2 -1.2436273214345268 0.3697303830878907 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 137566 10657 YLSGPDKNLTS True H1975_Epitope_Rep1 1193.5928174958499 1193.59172993586 45.948 2 -1.2437154360279825 0.36974136974136973 1.0 ['ENSG00000135917|ENST00000644224|SLC19A3', 'ENST00000477697.1_1_2:228566878-228582713:-|nuORF'] 32326 9051 GGAGFGAG True PC9_epitope_Rep5 592.26052476896 592.25997496793 39.759 1 -1.2437497780905957 0.36974136974136973 1.0 ['ENSG00000171446|ENST00000301656|KRT27', 'CON__Q7Z3Y8'] 55870 10147 LDFPVRDEKEP True NCI_RA007_Epitope_Rep1 1343.67213044571 1343.6710299358601 43.481 2 -1.2437630985852435 0.36974136974136973 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2'] 55587 18675 LCLLNPSG True H1975_Epitope_Rep1 815.42112481463 815.4205749679301 77.881 1 -1.2439288759774731 0.3697445827115425 1.0 ['ENSG00000168702|ENST00000389484|LRP1B'] 27609 14783 FPTFVAYE True PC9_epitope_Rep4 972.4592841451598 972.45818993586 64.795 2 -1.2439452586423116 0.3697445827115425 1.0 ['ENSG00000150403|ENST00000434316|TMCO3', 'ENST00000491166.1_1_13:114201574-114203850:+|nuORF', 'ENST00000460039.5_1_13:114200091-114203850:+|nuORF'] 56683 8063 LEAECRLRCPR True H1975_Epitope_Rep3 1344.6754590876799 1344.67436993586 35.988 2 -1.2439738115312606 0.3697523555818657 1.0 ['ENST00000528182.5_2_11:111957606-111959624:+|nuORF', 'ENST00000528048.5_2_11:111957606-111965694:+|nuORF'] 75078 195 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 1.0681 3 -1.2440063211146601 0.36976790074735466 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 113531 8291 TQTMSPSG True H1975_Epitope_Rep2 807.3432684167499 807.3427149679301 36.842 1 -1.2440099717115207 0.36976790074735466 1.0 ['ENST00000526146.5_1_11:118184568-118186240:+|nuORF'] 34245 16731 GPKKTKRE True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 73.648 2 -1.2440786481725183 0.36977567304253456 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 55377 12372 LASPRFSI True PC9_epitope_Rep3 889.50215201665 889.50104993586 52.618 2 -1.244133298591497 0.36977888492890526 1.0 ['ENST00000571732.5_1_17:1264590-1265226:-|nuORF'] 87742 10452 QVFIFRKSI True NCI_RA007_Epitope_Rep4 1136.67061432408 1136.66950993586 47.053 2 -1.2441374133456098 0.36977888492890526 1.0 ['ENST00000409725.1_1_2:128284280-128284364:-|nuORF'] 118369 21659 VDHGVGIMNKR True NCI_RA007_Epitope_Rep5 1224.63972520196 1224.63808490379 90.407 3 -1.2441753147233512 0.3697853082263574 1.0 ['nc|ENSG00000160199|P55347-2|PKNOX1'] 82259 9026 PTLRSMIE True PC9_epitope_Rep1 945.49535238405 945.49424993586 39.568 2 -1.244180692282577 0.3697853082263574 1.0 ['ENSG00000143643|ENST00000366661|TTC13', 'nc|ENSG00000143643|Q8NBP0-2|TTC13'] 911 7348 ADQDINYYIP True NCI_RA007_Epitope_Rep1 1210.5506183307 1210.5495299358602 32.576 2 -1.244238403663556 0.3697853082263574 1.0 ['HYAL4|p.D173Ifs*14|1|0.2|ENSG00000106302|chr7:123868788-123868788|C/-|frameshift_variant', 'ENSG00000106302|ENST00000223026|HYAL4'] 21510 5506 ERRDMESFWKL True NCI_RA007_Epitope_Rep5 1495.7241831019098 1495.7225249037901 27.868 3 -1.2442668959598604 0.3697853082263574 1.0 ['nc|ENSG00000010803|Q96GD3-3|SCMH1', 'nc|ENSG00000010803|Q96GD3|SCMH1', 'ENSG00000010803|ENST00000695335|SCMH1'] 134133 20303 WREFPDRLVGY True H1975_Epitope_Rep3 1436.72008369764 1436.71898993586 84.903 2 -1.244318489535022 0.369793079635978 1.0 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 65334 7365 LSELKRSEL True PC9_epitope_Rep4 1073.60807363717 1073.6069699358602 35.665 2 -1.2443734208817014 0.36981318207041125 1.0 ['nc|ENSG00000173698|Q8IZP9-9|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-5|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-3|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-2|ADGRG2', 'ENSG00000173698|ENST00000379869|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-10|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-8|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-7|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-6|ADGRG2', 'nc|ENSG00000173698|Q8IZP9-4|ADGRG2'] 133121 21024 WCDWRLHTP True H1975_Epitope_Rep2 1212.5498475683999 1212.54820490379 87.022 3 -1.2444070945140067 0.36982095294465817 1.0 ['OR11H12|p.L84*|1|0.18|ENSG00000257115|chr14:18601363-18601363|T/-|frameshift_variant', 'OR11H12|p.G242Vfs*34|1|0.14|ENSG00000257115|chr14:18601839-18601839|G/-|frameshift_variant', 'ENSG00000257115|ENST00000550708|OR11H12'] 97500 20423 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 84.621 2 -1.2444594248556533 0.36982872362726116 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 85721 19967 QLSQLQQEKH True PC9_epitope_Rep5 1237.64149902377 1237.6404099358601 81.854 2 -1.2444712670930556 0.36983649411822733 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 122215 13990 VGRLVRLVPF True NCI_RA007_Epitope_Rep3 1154.7287979065397 1154.72770993586 62.338 2 -1.2445369975364153 0.3698689256341015 1.0 ['ENST00000541657.5_3_12:122239775-122239856:-|nuORF'] 82828 6442 PVSSGFRDS True PC9_epitope_Rep3 950.4457593393399 950.44466993586 29.805 2 -1.2445542852229536 0.36988446504975275 1.0 ['ENST00000322315.5_1_19:3590178-3593283:+|nuORF'] 28566 11461 FSLYIYVYIYI True H1975_Epitope_Rep1 1455.7689909526698 1455.76788993586 49.065 2 -1.2445623427263006 0.36988446504975275 1.0 ['ENST00000501122.2_1_11:65204545-65204752:+|nuORF'] 29402 11443 FVFNLRWAEVP True H1975_Epitope_Rep2 1376.72410644892 1376.72300993586 49.068 2 -1.24461414437961 0.36990456462232746 1.0 ['CACNA2D4|p.G822V|1|0.43|ENSG00000151062|chr12:1844407-1844407|C/A|missense_variant'] 33366 10003 GLELLTSGDPP True H1975_Epitope_Rep3 1097.56045473841 1097.5593499358602 43.512 2 -1.2447181398682183 0.36991233369912335 1.0 ['REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 13049 20144 DLREGRWRGEV True H1975_Epitope_Rep1 1371.70074523539 1371.6996499358602 83.83 2 -1.244744550349876 0.36993243243243246 1.0 ['ENST00000216968.4_1_20:33764702-33764822:+|nuORF'] 116411 10368 TWKVAPFVRAW True H1975_Epitope_Rep3 1359.7451762466699 1359.7440699358601 44.935 2 -1.2447733117084974 0.369940200974046 1.0 ['ENST00000530534.1_1_11:71184711-71189599:+|nuORF'] 22896 6132 EVEYYYQRALE True NCI_RA007_Epitope_Rep2 1461.6776097489699 1461.6765099358602 28.459 2 -1.2448927984922022 0.3699726284122013 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 64146 14320 LQEREKQL True PC9_epitope_Rep5 1042.5771078620598 1042.5760099358602 60.084 2 -1.244974391885337 0.36998039626666007 1.0 ['nc|ENSG00000106443|O94880-2|PHF14', 'ENST00000490957.5_1_7:11013950-11101713:+|nuORF', 'nc|ENSG00000106443|O94880-1|PHF14', 'ENSG00000106443|ENST00000634607|PHF14', 'ENST00000497851.1_1_7:11075344-11076425:+|nuORF'] 12930 11512 DLNMESRPV True PC9_epitope_Rep2 1059.50189431647 1059.5007899358602 49.604 2 -1.2450002627090502 0.3700128224096267 1.0 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D'] 100241 7621 SLLPSREPP True H1975_Epitope_Rep2 994.5447451046199 994.54364993586 34.267 2 -1.2451011375943029 0.37002058957698897 1.0 ['ENST00000330333.10_1_21:42539880-42598206:+|nuORF'] 121681 10691 VGLLHMVL True NCI_RA007_Epitope_Rep5 880.5204449330801 880.51934993586 47.755 2 -1.245227253529336 0.37004845212116727 1.0 ['ENSG00000123353|ENST00000243045|ORMDL2'] 131392 9987 VVSTSSNK True NCI_RA007_Epitope_Rep2 820.4290466460401 820.4279499358599 43.469 2 -1.2452731425846986 0.37004845212116727 1.0 ['ENSG00000116497|ENST00000373475|S100PBP', 'nc|ENSG00000116497|Q96BU1-2|S100PBP', 'ENST00000531123.5_1_1:33290993-33299636:+|nuORF', 'ENST00000356689.7_1_1:33290993-33299636:+|nuORF'] 87305 17403 QSVKHALR True NCI_RA007_Epitope_Rep2 937.5457481641298 937.54464993586 72.437 2 -1.2453052738586325 0.3700516563312909 1.0 ['ENSG00000069956|ENST00000261845|MAPK6'] 16301 18799 EEIQTVYKI True PC9_epitope_Rep5 1121.5968402471299 1121.59574993586 77.323 2 -1.2453320190204082 0.3700516563312909 1.0 ['ENSG00000176658|ENST00000318217|MYO1D'] 137509 17003 YLPVLRGFPA True PC9_epitope_Rep4 1131.64406522307 1131.64296993586 73.395 2 -1.245473813831153 0.3701210641812757 1.0 ['ENSG00000008405|ENST00000008527|CRY1'] 55076 10986 LALKDVHG True PC9_epitope_Rep6 851.48650195251 851.48540993586 53.148 2 -1.2455242883338993 0.37014115761573074 1.0 ['LY75|p.G128V|1|0.19|ENSG00000054219|chr2:159898771-159898771|C/A|missense_variant'] 11074 12619 DDVHWKENGTL True PC9_epitope_Rep6 1312.6047791618798 1312.60368993586 59.997 2 -1.2455645418534917 0.37014619955129313 1.0 ['ENSG00000102805|ENST00000377453|CLN5'] 108850 4820 TERDQNYDYLR True H1975_Epitope_Rep3 1471.66917032359 1471.66753490379 23.666 3 -1.245636411914328 0.37014619955129313 1.0 ['CDH10|p.G758R|1|0.32|ENSG00000040731|chr5:24487758-24487758|C/T|missense_variant'] 110694 10389 TIYRTAYRR True H1975_Epitope_Rep1 1198.65708951826 1198.6559899358601 44.91 2 -1.2456465492962587 0.37014619955129313 1.0 ['ENSG00000172889|ENST00000308874|EGFL7'] 29888 19861 FVYNSPRGY True PC9_epitope_Rep4 1101.5243440132099 1101.5232499358601 84.525 2 -1.2456752748717315 0.37014619955129313 1.0 ['ENSG00000106299|ENST00000223023|WASL'] 39742 18852 HPYGHRKFI True PC9_epitope_Rep4 1153.61449643029 1153.6133899358601 80.6 2 -1.2456890486039163 0.37014619955129313 1.0 ['ENSG00000140526|ENST00000352732|ABHD2'] 98912 11376 SIWWIIRGP True H1975_Epitope_Rep3 1126.6287495120998 1126.62764993586 48.869 2 -1.2456979029861124 0.37014619955129313 1.0 ['ENSG00000080293|ENST00000019103|SCTR'] 33598 6900 GLLHEVVSL True PC9_epitope_Rep2 965.55458151233 965.55348993586 31.942 2 -1.2457418097262363 0.37014619955129313 1.0 ['ENSG00000213047|ENST00000620048|DENND1B'] 87082 11178 QSELPDFGGNF True H1975_Epitope_Rep2 1209.5302172392896 1209.52912993586 48.035 2 -1.2457814829082592 0.3701662906943777 1.0 ['SEC16A|p.V738F|1|0.27|ENSG00000148396|chr9:136475404-136475404|C/A|missense_variant'] 82711 14290 PVPLLACTMAI True PC9_epitope_Rep2 1127.60827396131 1127.6066249037901 60.232 3 -1.245940755489314 0.3702069441534271 1.0 ['ENST00000442297.1_1_X:138529367-138529487:+|nuORF'] 55763 6427 LDEDVWEFIW True H1975_Epitope_Rep1 1350.6132185872598 1350.6121299358601 29.782 2 -1.2460349196194893 0.3702069441534271 1.0 ['ENSG00000072657|ENST00000261180|TRHDE'] 33919 11 GMEDGSDDMD True H1975_Epitope_Rep2 1070.31685553838 1070.3157499358601 0.045678 2 -1.2460869421103622 0.3702069441534271 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant', 'ENST00000463046.5_1_2:61439047-61463244:-|nuORF'] 65393 8582 LSERHVAQFL True H1975_Epitope_Rep1 1198.64585612822 1198.64474993586 37.937 2 -1.2460888698621708 0.3702069441534271 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 27914 17601 FQLSDWSPW True H1975_Epitope_Rep3 1164.5240096600398 1164.52237490379 73.528 3 -1.246092450901863 0.3702069441534271 1.0 ['THSD7A|p.C1287F|1|0.29|ENSG00000005108|chr7:11407362-11407362|C/A|missense_variant'] 41494 7272 ICLILMASV True PC9_epitope_Rep4 961.53404639189 961.53294993586 35.286 2 -1.24614298024877 0.3702069441534271 1.0 ['ENST00000537699.1_1_12:10603035-10603776:-|nuORF', 'nc|ENSG00000134545|P26715-2|KLRC1', 'ENSG00000134545|ENST00000359151|KLRC1'] 41461 9697 IAWRTPEPVP True H1975_Epitope_Rep2 1164.6291434349198 1164.6280499358602 42.282 2 -1.2461530378624024 0.3702069441534271 1.0 ['ENSG00000126246|ENST00000246532|IGFLR1'] 9466 12486 AVWVAFPLL True PC9_epitope_Rep6 1014.5902387450598 1014.58914993586 59.446 2 -1.2462326996820983 0.3702069441534271 1.0 ['ENSG00000099219|ENST00000339450|ERMP1', 'nc|ENSG00000099219|Q7Z2K6-2|ERMP1'] 2919 5639 AFEEDLHKMLM True H1975_Epitope_Rep3 1362.63119423386 1362.63008993586 26.728 2 -1.2462811473780617 0.3702069441534271 1.0 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4'] 14691 9938 DVPFSQNA True PC9_epitope_Rep1 876.39774651776 876.39664993586 43.088 2 -1.2463160472543733 0.3702069441534271 1.0 ['ENSG00000198780|ENST00000687041|FAM169A'] 62045 10596 LLLVVILIVKK True PC9_epitope_Rep5 1249.9101163134499 1249.90900993586 45.746 2 -1.2463502520785987 0.37021014358784743 1.0 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF', 'ENST00000531050.5_1_6:128321419-128718758:-|nuORF', 'nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 120738 23218 VGAVEAGW True PC9_epitope_Rep2 787.3864535580699 787.3859049679301 94.789 1 -1.2463694054502488 0.37021014358784743 1.0 ['ENST00000593158.1_1_17:27209636-27224592:-|nuORF'] 137090 21681 YLCWKKTL True NCI_RA007_Epitope_Rep4 1053.56812340149 1053.56702993586 94.0 2 -1.2464260836795409 0.3702179057385131 1.0 ['nc|ENSG00000176406|Q9UQ26-4|RIMS2'] 74473 20057 NKIYVFFQHAF True PC9_epitope_Rep3 1412.72410644892 1412.72300993586 82.4 2 -1.246493523429988 0.37023799253115103 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 45902 5158 ISRGDLLGP True H1975_Epitope_Rep2 926.5185303567799 926.51742993586 24.917 2 -1.2466411590066753 0.3702950528728832 1.0 ['ENST00000609118.1_1_1:111505930-111506428:+|nuORF'] 108198 3210 TDWYLLNLFRL True NCI_RA007_Epitope_Rep2 1452.7765359445998 1452.77488490379 17.135 3 -1.2466650072800807 0.3702982499383781 1.0 ['ENST00000503240.5_1_5:148743537-148748214:+|nuORF', 'ENSG00000145882|ENST00000274569|PCYOX1L', 'ENST00000505669.5_1_5:148737686-148748214:+|nuORF', 'ENST00000507621.1_1_5:148743537-148743774:+|nuORF'] 59167 5815 LGFFFQSV True PC9_epitope_Rep6 943.4803539429098 943.47924993586 30.577 2 -1.246716988674607 0.3702982499383781 1.0 ['ENST00000398637.9_1_12:46576929-46576956:-|nuORF'] 43931 11368 ILEGLEKLRH True H1975_Epitope_Rep1 1206.70845638478 1206.70734993586 48.705 2 -1.2468804076254414 0.3703183347506193 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 127869 25497 VRPAIPGGG True PC9_epitope_Rep5 822.4711862415398 822.47008993586 103.33 2 -1.2469760340638218 0.3703507431416529 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 82845 11578 PVTDGQPHSI True H1975_Epitope_Rep3 1049.51417325233 1049.5130699358601 49.663 2 -1.2470709227592607 0.37035393867692007 1.0 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 27168 14786 FLSGYMWY True H1975_Epitope_Rep2 1065.46298962661 1065.4618899358602 62.033 2 -1.2471361861140318 0.37035393867692007 1.0 ['ENSG00000123684|ENST00000366997|LPGAT1'] 110296 19067 TIHEALKTV True PC9_epitope_Rep1 1010.5760452328999 1010.57494993586 78.131 2 -1.2473621644975625 0.370384975600138 1.0 ['ENSG00000166557|ENST00000299705|TMED3'] 127223 12361 VQIEHISSL True PC9_epitope_Rep6 1024.5553097883198 1024.5542099358602 58.951 2 -1.247384857243535 0.370384975600138 1.0 ['ENSG00000108671|ENST00000261712|PSMD11', 'nc|ENSG00000108671|O00231-2|PSMD11'] 57341 8622 LEGTYLDK True H1975_Epitope_Rep1 937.47566248529 937.47456993586 38.091 2 -1.2474586728063612 0.370384975600138 1.0 ['ENSG00000113504|ENST00000264930|SLC12A7'] 74335 13641 NIPLEELQRNL True NCI_RA007_Epitope_Rep2 1337.7303140281697 1337.7292099358601 57.699 2 -1.2474633076636477 0.370384975600138 1.0 ['ENSG00000174125|ENST00000308979|TLR1', 'ENSG00000174130|ENST00000508254|TLR6'] 56112 20704 LDLRRESL True PC9_epitope_Rep4 1000.5665431783599 1000.56544993586 87.799 2 -1.2474873520661893 0.37040505736361506 1.0 ['ENST00000376055.8_1_20:30310076-30310447:-|nuORF', 'ENST00000376062.6_1_20:30310076-30310181:-|nuORF', 'ENST00000420488.5_1_20:30310076-30311747:-|nuORF', 'ENST00000456404.5_1_20:30310076-30311747:-|nuORF', 'ENST00000422920.1_1_20:30310076-30310447:-|nuORF', 'ENST00000450273.1_1_20:30310076-30311603:-|nuORF', 'ENST00000439267.1_1_20:30310076-30311747:-|nuORF'] 44481 12307 INSLYKVI True NCI_RA007_Epitope_Rep4 948.5644179200399 948.56332993586 54.333 2 -1.247571019074014 0.37044978434996917 1.0 ['ENSG00000170819|ENST00000302334|BFSP2'] 80820 16703 PLTLSPAAPA True PC9_epitope_Rep2 936.5280324113198 936.52748496793 69.496 1 -1.2476013633107732 0.37045297712933756 1.0 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 86544 26634 QRAPKPLPRV True PC9_epitope_Rep3 1160.71421047156 1160.71310993586 108.99 2 -1.2476573315974382 0.37045297712933756 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 61480 14971 LLFLKLQP True NCI_RA007_Epitope_Rep5 970.6215388733399 970.62044993586 64.252 2 -1.2478325673977448 0.37049770187177306 1.0 ['ENST00000546740.5_1_12:89814932-89855458:-|nuORF'] 71547 18017 MLCLKIRKA True NCI_RA007_Epitope_Rep3 1074.6405771491 1074.63946993586 78.949 2 -1.2478737027979685 0.37050545875742413 1.0 ['ENST00000420115.6_2_3:133306843-133306921:+|nuORF'] 124945 12121 VLMAQKEGKR True NCI_RA007_Epitope_Rep3 1158.65431263694 1158.65320993586 54.791 2 -1.2478927505319812 0.370513215451913 1.0 ['ZNF160|p.V321Sfs*36|1|0.4|ENSG00000170949|chr19:53069573-53069573|C/-|frameshift_variant', 'ZNF160|p.A769Pfs*4|1|0.29|ENSG00000170949|chr19:53068233-53068233|C/-|frameshift_variant', 'ENSG00000170949|ENST00000683776|ZNF160'] 48093 26546 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 110.5 3 -1.247945570470189 0.3705456158509537 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 23411 5168 EVVKSARHMNI True NCI_RA007_Epitope_Rep2 1282.6815900139397 1282.67995490379 24.723 3 -1.2479947855132176 0.37056569365550723 1.0 ['nc|ENSG00000146151|Q8TB92-5|HMGCLL1', 'ENSG00000146151|ENST00000274901|HMGCLL1', 'nc|ENSG00000146151|Q8TB92|HMGCLL1'] 72465 8007 MTVEVEGSTV True PC9_epitope_Rep6 1050.49032657326 1050.48922993586 40.269 2 -1.2480520503051902 0.3705734493210774 1.0 ['nc|ENSG00000131016|Q02952-3|AKAP12', 'nc|ENSG00000131016|Q02952-2|AKAP12', 'ENSG00000131016|ENST00000402676|AKAP12'] 119141 19764 VEILTTNV True PC9_epitope_Rep4 887.49639792987 887.49530993586 84.146 2 -1.2481560837347903 0.37060128141941845 1.0 ['ENST00000354749.6_1_21:38538819-38538858:+|nuORF'] 108555 15427 TEGKNRLFF True PC9_epitope_Rep2 1110.5821932425 1110.58108993586 64.618 2 -1.2482246613723798 0.37060128141941845 1.0 ['ENST00000382292.7_2_13:23985465-23985534:-|nuORF'] 58756 16126 LFLPNLIPL True PC9_epitope_Rep6 1038.6477536211798 1038.64664993586 74.372 2 -1.2482544769270028 0.37063367873732456 1.0 ['ENST00000532268.1_1_11:126134081-126134120:-|nuORF'] 98484 10723 SIKYNHPLR True NCI_RA007_Epitope_Rep1 1126.6247267608198 1126.6236299358602 45.702 2 -1.248292136833515 0.37064918743762554 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2'] 10962 14508 DCGFGDGG True NCI_RA007_Epitope_Rep5 726.2279043113399 726.2273549679301 62.481 1 -1.2482977869657215 0.37064918743762554 1.0 ['ENSG00000108582|ENST00000225719|CPD'] 70649 11548 MCIMCRFVT True PC9_epitope_Rep5 1102.4795853742198 1102.4784899358601 49.416 2 -1.2483441897493066 0.37065694150115813 1.0 ['chr5:90822097-90965415|264|32.48|0.18|7.5|+|2|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|2'] 127870 25675 VRPAIPGGG True PC9_epitope_Rep5 822.4711862415398 822.47008993586 104.11 2 -1.2484326259281944 0.37069708991449624 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 57519 15173 LEKRLEQNLS True PC9_epitope_Rep1 1228.67755017932 1228.67644993586 63.183 2 -1.248441684496944 0.37069708991449624 1.0 ['ENSG00000136935|ENST00000373555|GOLGA1', 'ENST00000475407.5_2_9:127642811-127683993:-|nuORF'] 102779 9032 SQEMNTLFRFW True PC9_epitope_Rep3 1457.6761702803296 1457.6750699358602 39.684 2 -1.2485416427594709 0.3707618766016164 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 82675 16710 PVMPGHAK True PC9_epitope_Rep1 835.43744358511 835.43634993586 69.103 2 -1.2485670930347028 0.3707618766016164 1.0 ['ENSG00000033178|ENST00000322244|UBA6', 'nc|ENSG00000033178|A0AVT1-2|UBA6'] 18940 6498 ELFAWVQKKMV True H1975_Epitope_Rep1 1377.74787866861 1377.74623490379 30.055 3 -1.2486096322892057 0.3707696287991721 1.0 ['nc|ENSG00000006625|O75223-2|GGCT'] 95245 11755 SADFYRDWRR True NCI_RA007_Epitope_Rep3 1370.6479813865399 1370.6468899358601 53.348 2 -1.2486851522053435 0.3707773808057164 1.0 ['ENSG00000167131|ENST00000417826|CCDC103'] 81026 21398 PNWDFHNHE True PC9_epitope_Rep3 1194.48427010638 1194.48262490379 87.606 3 -1.248723128329616 0.37078513262125634 1.0 ['nc|ENSG00000172014|Q4UJ75|ANKRD20A4P', 'ENSG00000260691|ENST00000562196|ANKRD20A1'] 66925 7605 LSYFSFWWWWW True NCI_RA007_Epitope_Rep2 1692.7554065771997 1692.7543099358602 34.205 2 -1.2488614518558119 0.370805203764845 1.0 ['ENST00000300134.7_1_12:57504946-57505147:-|nuORF'] 23248 10428 EVRHTPVL True PC9_epitope_Rep3 949.53451477409 949.53340993586 45.05 2 -1.2489727064632663 0.3708252744139061 1.0 ['ENST00000262544.6_1_20:18488293-18488443:+|nuORF'] 55200 7376 LAPLCWPP True NCI_RA007_Epitope_Rep2 895.4625957037899 895.4620449679301 33.315 1 -1.2490131085049012 0.37084534456845786 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4', 'nc|ENSG00000184716|A6NH21-2|SERINC4', 'ENST00000448553.5_1_15:44087200-44089477:-|nuORF'] 99431 12625 SLEHLEQLAQY True H1975_Epitope_Rep2 1329.65648038157 1329.65538993586 53.66 2 -1.2491208650853503 0.37088548339410665 1.0 ['ENSG00000186150|ENST00000334179|UBL4B'] 77710 5386 PAAGKGAVR True PC9_epitope_Rep1 825.48208527841 825.48098993586 25.552 2 -1.2491357754796775 0.37088548339410665 1.0 ['ENST00000394071.6_2_14:74184720-74184954:-|nuORF'] 65040 10574 LSDKIFMMFWY True NCI_RA007_Epitope_Rep1 1479.6930662144298 1479.69196993586 45.115 2 -1.2491487802382566 0.3708932333050002 1.0 ['MROH2B|p.L189M|3|0.11|ENSG00000171495|chr5:41061620-41061620|G/T|missense_variant'] 25566 5064 FESKVSASE True NCI_RA007_Epitope_Rep3 982.46074069714 982.4596499358599 26.912 2 -1.2492594333954588 0.3709488673458075 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 133036 3483 VYVRLRPFFR True NCI_RA007_Epitope_Rep4 1351.7877097649896 1351.78606490379 19.345 3 -1.2492871004664157 0.3709488673458075 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 56029 12905 LDKKAHRVQF True NCI_RA007_Epitope_Rep2 1240.7040397106796 1240.70294993586 54.818 2 -1.2492931543012573 0.3709488673458075 1.0 ['ENST00000509659.5_1_4:88898870-88904045:+|nuORF'] 138497 18502 YRIGKVTS True NCI_RA007_Epitope_Rep3 922.52361573722 922.52250993586 80.965 2 -1.2492999897332273 0.3709488673458075 1.0 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'ENSG00000140740|ENST00000268379|UQCRC2'] 74263 10916 NIEPMYQYSL True H1975_Epitope_Rep3 1256.57472490356 1256.57362993586 47.075 2 -1.2493785095653995 0.37096436446053976 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'ENSG00000118997|ENST00000312428|DNAH7'] 37526 13542 GYLGTRCEC True H1975_Epitope_Rep2 1000.4106367839199 1000.40952993586 57.226 2 -1.2493788181867136 0.37096436446053976 1.0 ['ENSG00000082781|ENST00000296181|ITGB5'] 2615 18919 AESLVHVHFKE True H1975_Epitope_Rep1 1294.66698549562 1294.6658899358602 78.886 2 -1.249399721703218 0.37096933119842346 1.0 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'ENST00000494938.2_1_3:47466973-47468693:-|nuORF'] 62984 7058 LNELYTRFHH True H1975_Epitope_Rep1 1328.6625688215202 1328.6614699358602 32.181 2 -1.249522920000087 0.37096933119842346 1.0 ['GUCY1A2|p.D554H|1|0.17|ENSG00000152402|chr11:106810025-106810025|C/G|missense_variant'] 41673 9550 IDKWDLIK True NCI_RA007_Epitope_Rep5 1029.5858816406098 1029.58478993586 43.371 2 -1.2495923108728249 0.37096933119842346 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|62|2|sense', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|15|1|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|9|1|sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|159|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|163|3|sense', 'L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|154|3|sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|57|1|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|69|2|sense', 'nc|ENSG999|O00370|L1_ORF2'] 31200 6698 GDIVTGVYTG True PC9_epitope_Rep5 980.48147614172 980.48036993586 30.735 2 -1.2496178983739614 0.37096933119842346 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 32406 27299 GGGGGGGG True PC9_epitope_Rep1 474.18227444826005 474.18172496793 111.55 1 -1.2496359165438204 0.37096933119842346 1.0 ['CON__Q6IFZ6', 'ENST00000252674.8_2_19:6279890-6279947:-|nuORF', 'ENSG00000185960|ENST00000686671|SHOX', 'ENSG00000123364|ENST00000243056|HOXC13', 'LTK|p.G326Efs*48|1|0.5|ENSG00000062524|chr15:41511184-41511184|C/-|frameshift_variant', 'ENSG00000103241|ENST00000262426|FOXF1', 'nc|ENSG00000165655|Q96F45-3|ZNF503', 'ENST00000591649.5_1_19:10797828-10799985:+|nuORF', 'ENST00000555405.5_1_14:75551269-75558248:-|nuORF', 'ENST00000216019.11_1_22:38881942-38884127:-|nuORF', 'ENST00000587928.5_1_19:10794459-10799985:+|nuORF', 'ENST00000608721.1_1_6:161412512-161413208:-|nuORF', 'ENSG00000080709|ENST00000673685|KCNN2', 'ENSG00000152284|ENST00000282111|TCF7L1', 'nc|ENSG00000080709|Q9H2S1|KCNN2', 'ENST00000589239.5_1_19:14080804-14104655:-|nuORF', 'ENST00000563518.5_1_15:41799676-41805922:-|nuORF', 'nc|ENSG00000062524|P29376-3|LTK', 'ENSG00000108091|ENST00000263102|CCDC6', 'ENSG00000143869|ENST00000272224|GDF7', 'ENST00000556170.5_1_14:75553702-75572727:-|nuORF', 'nc|ENSG00000292354|O15266-2|SHOX', 'ENST00000426595.1_1_7:55955154-55973975:+|nuORF', 'ENST00000258111.4_1_12:70760395-70760632:+|nuORF', 'ENST00000317216.2_1_8:22550456-22550672:-|nuORF', 'ENST00000345425.6_1_19:14593738-14606936:-|nuORF', 'ENST00000393033.8_1_19:14603704-14606936:-|nuORF', 'SVA_D_dup132|chr1:226114299-226115980:-|1.3983671137746794|0.0922211982552955|3.92|465.0|66|2|anti-sense', 'HCN1|p.P77L|1|0.2|ENSG00000164588|chr5:45695864-45695864|G/A|missense_variant', 'FMN2|p.G49D|1|0.4|ENSG00000155816|chr1:240092255-240092255|G/A|missense_variant', 'ENST00000372324.5_1_1:44445001-44445064:+|nuORF', 'ENST00000371142.8_1_10:98346624-98346687:-|nuORF', 'ENST00000373132.3_1_1:36851434-36851494:-|nuORF', 'SVA_D_dup1026|chr13:30838585-30840641:-|4.257143864425426|0.3514679219565426|3.6|489.0|68|2|anti-sense', 'ENST00000377560.9_1_12:112820080-112820209:-|nuORF', 'nc|ENSG00000162923|Q9H7D7-4|WDR26', 'nc|ENSG00000178233|Q8IW70-2|TMEM151B', 'nc|ENSG00000162923|Q9H7D7-3|WDR26', 'SOX1|p.R124Afs*82|1|0.27|ENSG00000182968|chr13:112068027-112068027|C/-|frameshift_variant', 'ENST00000229416.10_1_6:53409297-53409843:-|nuORF', 'ENST00000507703.1_1_4:124319460-124322783:+|nuORF', 'ENST00000607598.2_1_8:9413493-9414024:-|nuORF', 'ENST00000555993.6_1_14:71267787-71275967:-|nuORF', 'nc|ENSG00000162367|P17542-3|TAL1', 'ENST00000481580.1_1_20:32664521-32665129:+|nuORF', 'ENST00000489107.1_1_9:12775714-12777225:+|nuORF', 'ENST00000491491.1_1_13:77900653-77900983:-|nuORF', 'SVA_F_dup683|chr12:56075092-56076774:-|1.8546114936796516|0.0829394271016015|4.48|483.0|75|3|anti-sense', 'FMN2|p.P879Hfs*8|1|0.13|ENSG00000155816|chr1:240207444-240207444|C/-|frameshift_variant', 'nc|ENSG00000120254|Q6UB35-2|MTHFD1L', 'ENSG00000120738|ENST00000239938|EGR1', 'ENST00000405737.2_2_13:41556342-41635296:-|nuORF', 'EGR1|p.S512Cfs*24|1|0.18|ENSG00000120738|chr5:138467978-138467994|TCAGCAGCTTCCCTTCC/-|frameshift_variant', 'ENST00000487509.6_1_16:31191511-31196501:+|nuORF', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENST00000542519.1_1_12:6782380-6787618:-|nuORF', 'ENSG00000205922|ENST00000382349|ONECUT3', 'ENST00000378279.3_1_8:117950559-117950772:+|nuORF', 'ENST00000370544.9_1_1:87794323-87794602:+|nuORF', 'ENSG00000205476|ENST00000380243|CCDC85C', 'nc|ENSG00000179915|P58400-1|NRXN1', 'nc|ENSG00000179915|P58400|NRXN1', 'ENSG00000119547|ENST00000491143|ONECUT2', 'nc|ENSG00000130224|Q5VUJ6-2|LRCH2', 'ENSG00000130224|ENST00000317135|LRCH2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000169083|P10275-3|AR', 'nc|ENSG00000169083|P10275-4|AR', 'ENST00000513847.5_1_X:66764886-66909456:+|nuORF', 'ENSG00000169083|ENST00000374690|AR', 'ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L', 'ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF', 'ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENSG00000126247|ENST00000246533|CAPNS1', 'ENSG00000105202|ENST00000221801|FBL', 'ENST00000599159.1_1_19:40329665-40336940:-|nuORF', 'CON__Q3TTY5', 'nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'ENST00000567567.5_1_15:31233675-31258111:-|nuORF', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'ENSG00000120093|ENST00000498678|HOXB3', 'TRA2A|p.G231D|1|0.26|ENSG00000164548|chr7:23506216-23506216|C/T|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'nc|ENSG00000120093|P14651-2|HOXB3', 'nc|ENSG00000136352|P43699|NKX2-1', 'ENSG00000136352|ENST00000354822|NKX2-1', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'KCNMA1|p.E329Kfs*60|1|0.17|ENSG00000156113|chr10:77110319-77110319|C/-|frameshift_variant', 'ENSG00000168772|ENST00000394767|CXXC4', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000084731|ENST00000264712|KIF3C', 'ENSG00000120254|ENST00000367321|MTHFD1L', 'ENSG00000141385|ENST00000269143|AFG3L2', 'ENSG00000171094|ENST00000389048|ALK', 'ENSG00000203782|ENST00000368742|LORICRIN', 'ENST00000418924.6_1_14:93042630-93154594:+|nuORF', 'ENSG00000100599|ENST00000216487|RIN3', 'nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1', 'ENSG00000166233|ENST00000379887|ARIH1', 'ENSG00000163214|ENST00000457308|DHX57', 'nc|ENSG00000163214|Q6P158-2|DHX57', 'DHX57|p.S709Qfs*30|1|0.28|ENSG00000163214|chr2:38848308-38848308|A/-|frameshift_variant', 'SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF', 'ENSG00000177733|ENST00000314940|HNRNPA0', 'ENSG00000135631|ENST00000486777|RAB11FIP5', 'ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF', 'ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000131724|P78552-2|IL13RA1', 'ENSG00000131724|ENST00000371666|IL13RA1', 'ENSG00000178573|ENST00000326043|MAF', 'nc|ENSG00000178573|O75444|MAF', 'ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF', 'nc|ENSG00000162613|Q96AE4-2|FUBP1', 'ENSG00000162613|ENST00000370768|FUBP1', 'FUBP1|p.Q546Hfs*15|1|0.43|ENSG00000162613|chr1:77956623-77956639|GTGGCTGTGCTTGCTGT/-|frameshift_variant', 'ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3', 'nc|ENSG00000143376|Q96L92-3|SNX27', 'ENSG00000143376|ENST00000458013|SNX27', 'ENSG00000155816|ENST00000319653|FMN2', 'FMN2|p.P1167Lfs*108|1|0.21|ENSG00000155816|chr1:240208308-240208308|C/-|frameshift_variant', 'DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENST00000303538.12_1_4:39929740-39979529:-|nuORF', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000181588|ENST00000402693|MEX3D', 'nc|ENSG00000181588|Q86XN8-2|MEX3D', 'nc|ENSG00000181588|Q86XN8-3|MEX3D', 'ENSG00000178233|ENST00000451188|TMEM151B', 'ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000163872|ENST00000305135|YEATS2', 'YEATS2-ATP11B|1|fusion', 'nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000273047.8_1_3:19988696-19992457:+|nuORF', 'nc|ENSG00000151322|Q8IXF0-4|NPAS3', 'nc|ENSG00000151322|Q8IXF0-2|NPAS3', 'nc|ENSG00000151322|Q8IXF0-3|NPAS3', 'ENSG00000151322|ENST00000356141|NPAS3', 'nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000132005|ENST00000254325|RFX1', 'ENSG00000138606|ENST00000690270|SHF', 'ENSG00000185129|ENST00000331327|PURA', 'ENST00000301015.13_2_16:88800318-88802577:-|nuORF', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENST00000307790.7_3_22:30221719-30234222:-|nuORF', 'ENSG00000142408|ENST00000270458|CACNG8', 'ENST00000238855.11_1_2:64751466-64751667:+|nuORF', 'nc|ENSG00000062524|P29376-4|LTK', 'ENSG00000062524|ENST00000263800|LTK', 'nc|ENSG00000062524|P29376-5|LTK', 'ENSG00000182968|ENST00000330949|SOX1', 'ENSG00000151615|ENST00000281321|POU4F2', 'ENSG00000169991|ENST00000455833|IFFO2', 'ADCY1|p.P287Lfs*16|1|0.35|ENSG00000164742|chr7:45610445-45610445|C/-|frameshift_variant', 'ENSG00000164742|ENST00000297323|ADCY1', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000162367|P17542-2|TAL1', 'ENSG00000162367|ENST00000691006|TAL1', 'nc|ENSG00000160201|Q01081-4|U2AF1', 'nc|ENSG00000160201|Q01081-2|U2AF1', 'ENSG00000160201|ENST00000291552|U2AF1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000153266|Q8TBJ5-2|FEZF2', 'ENSG00000153266|ENST00000283268|FEZF2', 'ENSG00000177374|ENST00000619757|HIC1', 'nc|ENSG00000177374|Q14526|HIC1', 'ENSG00000061455|ENST00000407847|PRDM6', 'nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2', 'ENSG00000103489|ENST00000261381|XYLT1', 'ENSG00000128709|ENST00000249499|HOXD9', 'nc|ENSG00000139154|Q6ZN18|AEBP2', 'ENSG00000139154|ENST00000266508|AEBP2', 'ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000162923|Q9H7D7-2|WDR26', 'nc|ENSG00000162923|Q9H7D7|WDR26', 'ENSG00000164588|ENST00000303230|HCN1', 'HCN1|p.A702Rfs*78|1|0.17|ENSG00000164588|chr5:45262491-45262491|G/-|frameshift_variant', 'nc|ENSG00000165655|Q96F45-2|ZNF503', 'ENSG00000165655|ENST00000372524|ZNF503', 'ENSG00000171262|ENST00000397609|FAM98B', 'nc|ENSG00000197451|Q99729-3|HNRNPAB', 'nc|ENSG00000197451|Q99729-4|HNRNPAB', 'nc|ENSG00000197451|Q99729|HNRNPAB', 'ENSG00000197451|ENST00000358344|HNRNPAB', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1'] 123057 11443 VGYSVPGR True PC9_epitope_Rep5 833.4395517600899 833.43844993586 49.014 2 -1.249668485043213 0.37096933119842346 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 130831 7659 VVFRANAI True NCI_RA007_Epitope_Rep4 888.5181364339599 888.51702993586 36.117 2 -1.2496823999198412 0.37096933119842346 1.0 ['ENSG00000112996|ENST00000507110|MRPS30', 'ENST00000508129.1_1_5:44813254-44813392:+|nuORF'] 10477 3780 CNETRWSQKW True PC9_epitope_Rep1 1336.5982543127998 1336.5971499358602 19.455 2 -1.2496970482380347 0.3709725096068578 1.0 ['ENSG00000140943|ENST00000343411|MBTPS1'] 112437 19845 TNLRQLTKTSR True NCI_RA007_Epitope_Rep5 1316.75244645508 1316.7513499358602 83.244 2 -1.2497406053035311 0.3709725096068578 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 89967 2251 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 11.847 3 -1.2497795853012732 0.3709788659539879 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 81200 17669 PPLMLIIF True H1975_Epitope_Rep1 942.5612471159 942.56014993586 73.544 2 -1.2498047265661387 0.3709788659539879 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 135681 7167 YEHLRQFCLEL True H1975_Epitope_Rep3 1449.70747040861 1449.70636993586 32.542 2 -1.2498059713706153 0.3709788659539879 1.0 ['nc|ENSG00000115540|Q9Y3A3-2|MOB4', 'nc|ENSG00000115540|Q9Y3A3-3|MOB4', 'ENSG00000115540|ENST00000323303|MOB4'] 783 9822 AAYQEEAERL True PC9_epitope_Rep4 1178.5567663402996 1178.5551149037901 45.424 3 -1.249809514715489 0.3709788659539879 1.0 ['ENSG00000152413|ENST00000334082|HOMER1'] 92447 19600 RQVLYLSP True H1975_Epitope_Rep2 974.5549158654999 974.55380993586 81.323 2 -1.249941725772381 0.37102355998374326 1.0 ['ENST00000466978.1_1_15:74640533-74658298:-|nuORF'] 97576 11503 SGWAMRNTNNH True NCI_RA007_Epitope_Rep5 1286.5574521299802 1286.55580490379 50.896 3 -1.2500048808447866 0.37103804950129293 1.0 ['ENSG00000124827|ENST00000379491|GCM2'] 85188 2676 QKELDMYVEWN True PC9_epitope_Rep5 1453.6547661294098 1453.65313490379 14.799 3 -1.2500109136290494 0.37103804950129293 1.0 ['ENSG00000182263|ENST00000333129|FIGN'] 112442 23491 TNLRQLTKTSR True PC9_epitope_Rep5 1316.75244645508 1316.7513499358602 95.339 2 -1.2500324001587073 0.37103804950129293 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 55622 24496 LCWKKVDLG True H1975_Epitope_Rep1 1060.57393705792 1060.57282993586 101.53 2 -1.2500568112151245 0.37103804950129293 1.0 ['ENSG00000118496|ENST00000237281|FBXO30'] 108767 7226 TEPLEINLEP True NCI_RA007_Epitope_Rep1 1153.5866694862498 1153.5855699358601 32.097 2 -1.2502304290834938 0.37103804950129293 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-5|USP16', 'ENST00000474835.5_1_21:30400234-30414894:+|nuORF'] 115880 14358 TVPCCFGY True PC9_epitope_Rep6 888.3509966494798 888.34988993586 67.124 2 -1.2502700961207844 0.37103804950129293 1.0 ['chr2:222572022-222586338|111|10.41|0.25|5.35|-|0|TE_info:L1PA5,L1PA5_dup1583,L1,LINE,donor,+,222586338,222590526|FARSB,None|20'] 30676 20808 GALLAMIYNK True PC9_epitope_Rep3 1092.60015180576 1092.5990499358602 85.309 2 -1.2503066235765856 0.37103804950129293 1.0 ['ENSG00000069431|ENST00000261200|ABCC9', 'nc|ENSG00000069431|O60706|ABCC9'] 20286 6559 EPAGTGKTE True PC9_epitope_Rep5 888.41887588516 888.41776993586 30.2 2 -1.2503079176763272 0.37103804950129293 1.0 ['DNAH5|p.G1980E|2|0.2|ENSG00000039139|chr5:13830719-13830719|C/T|missense_variant'] 64153 8728 LQEYNWELE True NCI_RA007_Epitope_Rep2 1222.5506183307 1222.5495299358602 38.595 2 -1.250358069497967 0.37103804950129293 1.0 ['GAD2|p.A150E|1|0.31|ENSG00000136750|chr10:26219205-26219205|C/A|missense_variant'] 82477 8406 PVDYEEFVR True H1975_Epitope_Rep1 1152.54513902744 1152.5440499358601 37.262 2 -1.2503623685047223 0.37103804950129293 1.0 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 35334 10375 GSVTLSEIRLP True PC9_epitope_Rep3 1170.66083748602 1170.65920490379 44.85 3 -1.2503699016779295 0.37103804950129293 1.0 ['nc|ENSG00000011426|Q9NQW6-2|ANLN', 'ENSG00000011426|ENST00000265748|ANLN'] 126634 17808 VPQELLVTV True PC9_epitope_Rep2 996.5855472874399 996.58444993586 73.791 2 -1.2503981814669 0.37103804950129293 1.0 ['ENSG00000184985|ENST00000507866|SORCS2'] 21052 16121 ERDMRRERQRR True NCI_RA007_Epitope_Rep1 1586.8284224433398 1586.82732993586 66.813 2 -1.2504602627162722 0.37103804950129293 1.0 ['ENST00000579009.1_1_17:16842557-16842860:-|nuORF'] 51817 24581 KKKKKVQLTL True H1975_Epitope_Rep2 1212.8281775946398 1212.8265449037901 101.11 3 -1.2505054656534569 0.37104440121161375 1.0 ['ENST00000527958.5_1_11:117041336-117041564:+|nuORF'] 117248 20348 TYWYLWRF True PC9_epitope_Rep4 1233.5971150306498 1233.5960099358601 86.413 2 -1.250512598064425 0.37104440121161375 1.0 ['REL-MAN1A2|1|fusion', 'ENSG00000198162|ENST00000356554|MAN1A2', 'MAN1A2|p.H546L|1|0.13|ENSG00000198162|chr1:117499514-117499514|A/T|missense_variant'] 97497 20046 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 83.086 2 -1.2505327697869466 0.37104440121161375 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 92736 17340 RRKKYGIVL True PC9_epitope_Rep3 1131.72404687927 1131.72241490379 71.871 3 -1.2505660384539476 0.37104440121161375 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 76991 9621 NVSVEIMVPNS True NCI_RA007_Epitope_Rep1 1187.58562394043 1187.58452993586 41.422 2 -1.2507342507238 0.37110317655749814 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 100509 5597 SLPNSRIVI True NCI_RA007_Epitope_Rep3 997.59202965021 997.59092993586 29.009 2 -1.2507476810720424 0.37110317655749814 1.0 ['CLPP|p.M176V|1|0.68|ENSG00000125656|chr19:6364610-6364610|A/G|missense_variant'] 53556 23920 KVRFLKLKK True NCI_RA007_Epitope_Rep4 1158.7964835435398 1158.79483490379 103.74 3 -1.2507599950628778 0.37110317655749814 1.0 ['nc|ENSG00000154258|Q8IUA7-4|ABCA9', 'nc|ENSG00000154258|Q8IUA7-3|ABCA9', 'ENSG00000154258|ENST00000340001|ABCA9'] 21359 6403 ERLQELYSEQK True H1975_Epitope_Rep1 1421.7150578868498 1421.7134249037902 29.688 3 -1.2507965032593227 0.37110317655749814 1.0 ['ENSG00000144824|ENST00000431670|PHLDB2'] 111111 14063 TLEKKIHELEK True PC9_epitope_Rep6 1366.78201524786 1366.78036490379 65.967 3 -1.2507972867268615 0.37110317655749814 1.0 ['ENSG00000157827|ENST00000288670|FMNL2', 'nc|ENSG00000157827|Q96PY5|FMNL2'] 30224 15375 GAAAATEKVQL True PC9_epitope_Rep1 1057.5767735088898 1057.57566993586 63.957 2 -1.250814914179407 0.37110317655749814 1.0 ['ENSG00000180921|ENST00000388913|FAM83H'] 78354 7426 PATNLTRAL True PC9_epitope_Rep4 955.5450794577899 955.5439899358599 35.914 2 -1.2509014087752108 0.37112640508230427 1.0 ['nc|ENSG00000185621|Q96KR4-2|LMLN', 'nc|ENSG00000185621|Q96KR4|LMLN', 'ENSG00000185621|ENST00000420910|LMLN'] 71187 17356 MFKLILPV True NCI_RA007_Epitope_Rep4 959.5877962169099 959.58668993586 75.164 2 -1.2509566936018126 0.37112640508230427 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 78369 4485 PATSSHHLLRQ True PC9_epitope_Rep4 1245.6578177942501 1245.65617490379 23.723 3 -1.2510068832486319 0.37112640508230427 1.0 ['ENST00000339464.8_1_22:46318425-46318659:-|nuORF'] 72577 13208 MVPFIFVG True PC9_epitope_Rep4 908.4829967951998 908.48188993586 58.703 2 -1.2510802724653607 0.37117108243868807 1.0 ['TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion'] 8503 5656 ATVMDKTRAL True NCI_RA007_Epitope_Rep4 1104.59612905448 1104.59502993586 28.362 2 -1.2511234789378487 0.37118656587792087 1.0 ['CASP1|p.S339Lfs*16|1|0.12|ENSG00000137752|chr11:105026941-105026942|AG/-|frameshift_variant', 'nc|ENSG00000137752|P29466-2|CASP1', 'ENSG00000137752|ENST00000533400|CASP1', 'ENST00000527065.1_1_11:104915107-104915377:-|nuORF', 'ENSG00000204397|ENST00000673097|CARD16', 'ENST00000526511.5_1_11:104901858-104905840:-|nuORF', 'nc|ENSG00000204397|Q5EG05|CARD16'] 90097 22114 RGRAPTAP True PC9_epitope_Rep5 824.461684187 824.46058993586 90.096 2 -1.2511304293313117 0.37118656587792087 1.0 ['ENST00000325888.12_1_7:128470572-128470641:+|nuORF'] 99427 8154 SLEGSRWP True PC9_epitope_Rep5 930.45593010022 930.45482993586 36.303 2 -1.2511596694325844 0.37119645494830134 1.0 ['ENSG00000183397|ENST00000329493|TEKTIP1'] 71186 17108 MFKLILPV True NCI_RA007_Epitope_Rep4 959.5877962169099 959.58668993586 74.12 2 -1.2511751896077008 0.37119645494830134 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 128994 21049 VSWRAKAA True PC9_epitope_Rep5 887.4977353425497 887.49662993586 86.025 2 -1.2511889858255654 0.37119645494830134 1.0 ['ENST00000286355.9_1_8:132052932-132053124:-|nuORF'] 85980 5955 QPGDPGVP True PC9_epitope_Rep6 765.36571811349 765.36462993586 31.208 2 -1.251242172252681 0.37119645494830134 1.0 ['ENSG00000204262|ENST00000374866|COL5A2'] 111499 13607 TLLLTAQHW True PC9_epitope_Rep4 1081.59202965021 1081.59092993586 60.233 2 -1.251341914176152 0.37119645494830134 1.0 ['nc|ENSG00000205629|Q9UIC8-2|LCMT1'] 74610 6738 NLDSIHRLIEE True H1975_Epitope_Rep1 1337.69392851945 1337.6922749037901 30.958 3 -1.2513568835259188 0.37119645494830134 1.0 ['ENST00000577772.5_1_18:66504000-66564823:+|nuORF', 'nc|ENSG00000150636|Q68D86-2|CCDC102B', 'ENSG00000150636|ENST00000360242|CCDC102B'] 12915 8726 DLNDERLRYQN True NCI_RA007_Epitope_Rep2 1434.6851547408999 1434.68404993586 38.587 2 -1.2514513660652318 0.37119645494830134 1.0 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 97433 22458 SGGGGGGGGD True PC9_epitope_Rep6 676.24124587636 676.24069496793 99.38 1 -1.251463725934976 0.37119645494830134 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1'] 68279 20505 LTRKRRRSRPW True PC9_epitope_Rep5 1510.9069304642198 1510.90582993586 83.913 2 -1.251496505383379 0.37119645494830134 1.0 ['ENST00000370995.6_2_1:67891962-67895727:-|nuORF'] 80371 18146 PLGQQKQEV True PC9_epitope_Rep1 1025.5505587610498 1025.54946993586 74.589 2 -1.2515023117505144 0.37119645494830134 1.0 ['ROBO1|p.G1375Afs*42|1|0.21|ENSG00000169855|chr3:78617793-78617793|C/-|frameshift_variant', 'nc|ENSG00000169855|Q9Y6N7-6|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-5|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-4|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-3|ROBO1', 'ENSG00000169855|ENST00000464233|ROBO1', 'nc|ENSG00000169855|Q9Y6N7-2|ROBO1'] 119524 10653 VEQVKSETIS True NCI_RA007_Epitope_Rep4 1118.5819184589798 1118.58082993586 47.826 2 -1.2515350484912489 0.37119645494830134 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant', 'CMYA5|p.S2056L|1|0.34|ENSG00000164309|chr5:79734932-79734932|C/T|missense_variant'] 71184 17614 MFKLILPV True H1975_Epitope_Rep3 959.5877962169099 959.58668993586 73.59 2 -1.2515368877932507 0.37119645494830134 1.0 ['ENST00000436996.1_1_22:28318344-28318410:+|nuORF'] 10869 25201 DAMIVNKA True PC9_epitope_Rep1 860.4425885352 860.44148993586 101.82 2 -1.2515548065375635 0.37119645494830134 1.0 ['nc|ENSG00000125630|Q9H9Y6-3|POLR1B', 'ENSG00000125630|ENST00000263331|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-5|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-2|POLR1B', 'nc|ENSG00000125630|Q9H9Y6-4|POLR1B'] 38194 6162 HESPEERHS True NCI_RA007_Epitope_Rep1 1106.4740993455 1106.47300993586 28.005 2 -1.251558711098668 0.37119645494830134 1.0 ['nc|ENSG00000186566|Q9UKJ3-2|GPATCH8', 'TMEM98-GPATCH8|1|fusion', 'ENSG00000186566|ENST00000591680|GPATCH8', 'GPATCH8|p.Q1363Pfs*47|1|0.23|ENSG00000186566|chr17:44397977-44397989|GCTGTAGCTGGCT/-|frameshift_variant'] 122119 6541 VGRGQPWAP True PC9_epitope_Rep4 966.5035489989798 966.50244993586 32.287 2 -1.2516442096980245 0.37122881303775185 1.0 ['ENST00000405486.5_2_22:41641775-41642279:-|nuORF'] 78743 11982 PEGLYRLK True H1975_Epitope_Rep3 974.5549158655 974.55380993586 51.246 2 -1.2517326334850358 0.3712365525220945 1.0 ['nc|ENSG00000186654|P85299-5|PRR5'] 98026 7072 SHTANILP True PC9_epitope_Rep3 851.4501164437901 851.44900993586 32.213 2 -1.2519512990447985 0.3713244796730956 1.0 ['nc|ENSG00000139278|P48060-2|GLIPR1', 'ENSG00000139278|ENST00000266659|GLIPR1'] 48170 13115 KASMVLFL True PC9_epitope_Rep4 907.5201105799099 907.51900993586 58.342 2 -1.2519924854978655 0.3713244796730956 1.0 ['RYR1|p.R4174Pfs*35|1|0.31|ENSG00000196218|chr19:38561349-38561352|CCGC/-|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.M2582Afs*19|1|0.11|ENSG00000196218|chr19:38502635-38502636|TA/-|frameshift_variant'] 6256 15656 APRMRAGDGCP True PC9_epitope_Rep1 1129.5120821606897 1129.5109899358602 65.041 2 -1.252005518176718 0.3713244796730956 1.0 ['ENST00000558061.1_1_15:48938242-48938584:+|nuORF'] 45520 10324 ISFARCFTQC True NCI_RA007_Epitope_Rep2 1174.5263352425 1174.5252299358601 44.748 2 -1.2520291075205112 0.3713244796730956 1.0 ['OR5M11|p.G95R|1|0.16|ENSG00000255223|chr11:56542975-56542975|C/G|missense_variant'] 97465 8793 SGHSSNDKYY True H1975_Epitope_Rep2 1156.4785160196 1156.4774099358601 38.786 2 -1.252040152851889 0.3713244796730956 1.0 ['HIPK1|p.Q36H|1|0.15|ENSG00000163349|chr1:113940491-113940491|G/T|missense_variant'] 70069 19597 LYHYVMALSL True PC9_epitope_Rep3 1208.6263665535998 1208.62471490379 80.618 3 -1.2520588751430666 0.37133221740842853 1.0 ['chr6:45020632-45176322|132|12.64|0.0|13.05|-|1|TE_info:L1PA3,L1PA3_dup4060,L1,LINE,donor,+,45176322,45181869|SUPT3H,None|48'] 114606 16989 TSLRVGRK True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56030993586 72.107 2 -1.252169554847951 0.37133995495329175 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 66483 7432 LSRTLLGSH True NCI_RA007_Epitope_Rep2 982.5559784946599 982.55488993586 33.535 2 -1.2523068427201092 0.37139692307692307 1.0 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'LRBA|p.F2167Sfs*7|1|0.25|ENSG00000198589|chr4:150487818-150487818|G/-|frameshift_variant', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA'] 35223 14304 GSHHQLQSA True PC9_epitope_Rep1 963.45224170211 963.45114993586 59.845 2 -1.2523306089820847 0.37140465963495833 1.0 ['ENSG00000143631|ENST00000368799|FLG', 'CON__P20930'] 98179 18325 SIDLVLAAS True PC9_epitope_Rep3 887.49639792987 887.49530993586 75.695 2 -1.2524373622923581 0.37146162555998624 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant'] 8430 17730 ATRTQKKK True NCI_RA007_Epitope_Rep5 959.5876129761099 959.58650993586 74.979 2 -1.2524807429094396 0.37147111669004895 1.0 ['nc|ENSG00000170802|P32314-2|FOXN2'] 68289 8348 LTRLQTYRF True NCI_RA007_Epitope_Rep4 1196.6665915727997 1196.66494490379 38.925 3 -1.2524963184923157 0.37147111669004895 1.0 ['ENSG00000127080|ENST00000287996|IPPK'] 81888 15390 PSLGSLLPVAQ True H1975_Epitope_Rep2 1080.6179100448799 1080.6168099358601 64.356 2 -1.252548691167528 0.37147111669004895 1.0 ['nc|ENSG00000164488|Q5SW24-4|DACT2', 'ENSG00000164488|ENST00000366795|DACT2'] 59641 7373 LGSLTASHR True PC9_epitope_Rep1 940.50902830224 940.50792993586 33.173 2 -1.2525972917689814 0.37147111669004895 1.0 ['ENST00000574938.5_1_17:79650618-79650651:-|nuORF'] 5435 4049 ALWWSPNGKFL True H1975_Epitope_Rep3 1317.6869926642096 1317.6853349037901 20.703 3 -1.2526297860176958 0.37147111669004895 1.0 ['ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 76881 23053 NVIRVRRY True PC9_epitope_Rep1 1074.6410455312998 1074.6399499358602 93.474 2 -1.2526428644194947 0.37147111669004895 1.0 ['ENSG00000069431|ENST00000261200|ABCC9', 'nc|ENSG00000069431|O60706|ABCC9', 'ABCC8|p.C267Wfs*92|1|0.15|ENSG00000006071|chr11:17461604-17461604|G/-|frameshift_variant', 'ENSG00000006071|ENST00000389817|ABCC8', 'nc|ENSG00000006071|Q09428-2|ABCC8', 'ABCC8|p.Q1196Sfs*12|1|0.23|ENSG00000006071|chr11:17402725-17402725|G/-|frameshift_variant'] 101772 18868 SPHRVPILATA True PC9_epitope_Rep2 1160.6665915728 1160.66494490379 77.941 3 -1.252749520811145 0.3715111986217081 1.0 ['ENST00000522421.1_1_2:220250088-220250490:-|nuORF'] 94269 15684 RWRYRCWERR True H1975_Epitope_Rep1 1565.7898521066497 1565.78874993586 65.616 2 -1.2527577916609958 0.3715111986217081 1.0 ['ENST00000328599.4_1_8:125463328-125463391:+|nuORF'] 2831 19158 AEVKELKKQL True PC9_epitope_Rep5 1184.7128730588797 1184.71176993586 78.728 2 -1.2527827196519736 0.37151893282140264 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 104384 9857 SSGERWIRY True PC9_epitope_Rep6 1152.5676058075198 1152.56650993586 48.392 2 -1.2528158164569034 0.371526666830745 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 62044 9261 LLLVVILIVKK True PC9_epitope_Rep4 1249.9101163134499 1249.90900993586 43.221 2 -1.2529607133857013 0.3716099817886499 1.0 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF', 'ENST00000531050.5_1_6:128321419-128718758:-|nuORF', 'nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 73846 24397 NHFLIWVLNW True PC9_epitope_Rep4 1340.7029770815197 1340.7018899358602 102.32 2 -1.2529631383567268 0.3716099817886499 1.0 ['ENST00000256646.6_1_1:120455306-120455408:-|nuORF'] 121643 5897 VGLGGLGE True NCI_RA007_Epitope_Rep5 700.3755545212 700.3750049679301 29.37 1 -1.2530046238803965 0.3716099817886499 1.0 ['ENST00000263269.3_1_19:48946008-48947172:+|nuORF'] 89966 2188 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 11.507 3 -1.2530236359278266 0.3716099817886499 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 60894 5497 LKRLKAKKP True PC9_epitope_Rep1 1080.74953335112 1080.74842993586 25.974 2 -1.2530310273572318 0.3716099817886499 1.0 ['ENST00000373465.2_1_X:46278605-46278842:-|nuORF'] 17092 21638 EGRKRWKRK True H1975_Epitope_Rep2 1242.7421565548996 1242.74050490379 89.51 3 -1.2530406361391644 0.3716099817886499 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 40330 12048 HRRWEHWWRME True NCI_RA007_Epitope_Rep2 1707.7953314099097 1707.7942299358601 51.456 2 -1.253125523339915 0.3716254460440507 1.0 ['ENST00000398117.1_1_18:60791148-60791340:-|nuORF'] 125846 10181 VNQGLIRMY True NCI_RA007_Epitope_Rep1 1092.57499968708 1092.57390993586 43.613 2 -1.2531568438629508 0.3716254460440507 1.0 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA', 'ENSG00000235007|ENST00000674648|unknown'] 26200 6779 FHTIIEFPLER True PC9_epitope_Rep2 1400.7452358163198 1400.7436049037901 31.48 3 -1.2533149421920728 0.3716454823983955 1.0 ['nc|ENSG00000134909|A7KAX9-2|ARHGAP32', 'nc|ENSG00000134909|A7KAX9|ARHGAP32', 'ENSG00000134909|ENST00000682385|ARHGAP32', 'ENST00000534357.1_1_11:128850446-128851410:-|nuORF'] 18081 8924 EIKKHRARVKK True NCI_RA007_Epitope_Rep2 1391.8837354081495 1391.8826299358602 39.337 2 -1.2535615068611112 0.3717101620464361 1.0 ['ENST00000472303.1_1_22:36545150-36545344:-|nuORF'] 117372 8309 VAAVMCRVP True PC9_epitope_Rep3 944.4935785622399 944.49248993586 36.933 2 -1.2535788328339479 0.3717101620464361 1.0 ['ENST00000591387.5_1_18:46066034-46066157:+|nuORF'] 42608 23433 IETDKQIIRHE True PC9_epitope_Rep5 1380.7361276846002 1380.7350299358602 95.116 2 -1.253621282005813 0.3717301966188449 1.0 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 120399 9137 VFSNILTNII True NCI_RA007_Epitope_Rep1 1132.64921017316 1132.64755490379 39.544 3 -1.2536769779843326 0.3717410829631999 1.0 ['SLC9C2|p.M250I|1|0.21|ENSG00000162753|chr1:173581899-173581899|C/A|missense_variant'] 115719 22681 TVLFGFLLL True PC9_epitope_Rep1 1021.6212045201698 1021.62010993586 92.046 2 -1.2536975695798638 0.3717410829631999 1.0 ['nc|ENSG00000277399|Q6PRD1|GPR179', 'ENSG00000277399|ENST00000616987|GPR179'] 73555 6663 NFRPTFSLFSW True NCI_RA007_Epitope_Rep2 1400.6877209402 1400.68606490379 30.529 3 -1.2537311661105792 0.3717410829631999 1.0 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9', 'SLC12A9|p.G497Rfs*4|1|0.28|ENSG00000146828|chr7:100861535-100861536|-/A|frameshift_variant'] 111769 17120 TLQPAWPAA True PC9_epitope_Rep1 953.4970666362099 953.49596993586 70.676 2 -1.2538230076470196 0.3717611161691971 1.0 ['ENST00000564946.5_1_16:30663032-30664184:+|nuORF'] 86551 27003 QRAPKPLPRV True PC9_epitope_Rep5 1160.71421047156 1160.71310993586 110.43 2 -1.2538697787687787 0.3717642716535433 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 22020 20069 ESQAAKDLLYR True PC9_epitope_Rep1 1292.67246479888 1292.6713699358602 82.021 2 -1.253876923020405 0.3717642716535433 1.0 ['nc|ENSG00000129515|Q9UNH7-2|SNX6', 'ENST00000556162.5_1_14:35032330-35073396:-|nuORF', 'ENSG00000129515|ENST00000362031|SNX6'] 119228 18204 VEKRLTFL True PC9_epitope_Rep2 1004.6018660579199 1004.60076993586 75.329 2 -1.2538951551408601 0.3717720008366039 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2'] 123567 25383 VIILKMFW True PC9_epitope_Rep2 1048.61434531792 1048.61324993586 103.32 2 -1.2539576004847954 0.37177831088146646 1.0 ['ENSG00000115602|ENST00000233954|IL1RL1'] 3206 12335 AGERFHMVQ True PC9_epitope_Rep1 1073.5076484032497 1073.5065499358602 52.303 2 -1.25402647023911 0.37177831088146646 1.0 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 82176 6295 PTEIIAFSDR True PC9_epitope_Rep4 1147.5873381925899 1147.58569490379 31.273 3 -1.2540517543178387 0.37177831088146646 1.0 ['ENSG00000117450|ENST00000319248|PRDX1'] 67069 6935 LTAYFGLLDIC True PC9_epitope_Rep2 1227.6209468199897 1227.6193049037902 32.077 3 -1.2540607013021172 0.37177831088146646 1.0 ['ENST00000435270.2_1_1:146791151-146791412:+|nuORF'] 84307 8296 QFHEDMIGYYL True NCI_RA007_Epitope_Rep1 1414.6227377251398 1414.62109490379 36.27 3 -1.2540970416426966 0.3717983416578501 1.0 ['OTUD7A|p.E659D|1|0.14|ENSG00000169918|chr15:31484119-31484119|C/G|missense_variant'] 21927 19039 ESHLDTPYNVP True PC9_epitope_Rep2 1270.58298108814 1270.58188993586 78.599 2 -1.2541609410021746 0.3718137978545419 1.0 ['nc|ENSG00000103507|O14874-3|BCKDK', 'ENSG00000103507|ENST00000219794|BCKDK'] 85709 5894 QLSDLRVHQR True NCI_RA007_Epitope_Rep2 1250.68436689526 1250.6832699358602 27.542 2 -1.2542123100574734 0.3718137978545419 1.0 ['nc|ENSG00000267908|P0CG00|ZSCAN5DP'] 134369 15780 WSLDHKIFYY True NCI_RA007_Epitope_Rep1 1370.66592286646 1370.66482993586 65.476 2 -1.2543270425498754 0.37185243501900533 1.0 ['ENSG00000130988|ENST00000397180|RGN'] 101246 17830 SLWHPEPSP True PC9_epitope_Rep1 1048.4977949122 1048.49668993586 73.376 2 -1.2543460278022136 0.37185243501900533 1.0 ['ENST00000562945.2_1_16:34428948-34429212:-|nuORF'] 134623 8851 WWFSWRRRDFL True NCI_RA007_Epitope_Rep1 1653.8316998352896 1653.83005490379 38.429 3 -1.2543575295871021 0.37185243501900533 1.0 ['ENSG00000132793|ENST00000373257|LPIN3', 'nc|ENSG00000132793|Q9BQK8-2|LPIN3'] 20009 4306 EMLRGMYLTR True NCI_RA007_Epitope_Rep2 1268.6369483206397 1268.63584993586 21.389 2 -1.254361435565761 0.37185243501900533 1.0 ['ENST00000497435.1_1_9:116356439-116356619:+|nuORF', 'nc|ENSG00000138835|P49796-7|RGS3', 'nc|ENSG00000138835|P49796-8|RGS3'] 97399 23180 SGESDVRCV True H1975_Epitope_Rep3 950.4127449589 950.4116499358599 96.794 2 -1.2544058121045836 0.37185243501900533 1.0 ['nc|ENSG00000019485|Q9NQV5-2|PRDM11', 'nc|ENSG00000019485|Q9NQV5|PRDM11', 'ENSG00000019485|ENST00000683152|PRDM11'] 58637 19790 LFGEKTCQF True PC9_epitope_Rep5 1071.5059170677498 1071.50480993586 81.167 2 -1.2544981500810746 0.3718801894335445 1.0 ['ENSG00000170542|ENST00000380698|SERPINB9'] 119208 11173 VEKNKSIQSLH True H1975_Epitope_Rep1 1281.70409928033 1281.70300993586 47.945 2 -1.2545481463501391 0.3718801894335445 1.0 ['TRAF3|p.R360Afs*2|1|0.16|ENSG00000131323|chr14:102903371-102903371|C/-|frameshift_variant', 'nc|ENSG00000131323|Q13114-2|TRAF3', 'TRAF3|p.Y548*|1|0.51|ENSG00000131323|chr14:102905720-102905726|ATATTAA/-|frameshift_variant', 'ENSG00000131323|ENST00000392745|TRAF3'] 121599 10826 VGLAYFAA True PC9_epitope_Rep1 810.42759009406 810.42648993586 46.528 2 -1.2545765610138575 0.37190021649281635 1.0 ['nc|ENSG00000100433|P57789|KCNK10', 'nc|ENSG00000100433|P57789-4|KCNK10', 'ENSG00000100433|ENST00000319231|KCNK10', 'KCNK2|p.V303I|1|0.17|ENSG00000082482|chr1:215195036-215195036|G/A|missense_variant', 'nc|ENSG00000082482|O95069-2|KCNK2', 'nc|ENSG00000082482|O95069-3|KCNK2', 'ENSG00000082482|ENST00000444842|KCNK2'] 16698 6767 EEVHESVDSD True H1975_Epitope_Rep3 1144.45202648824 1144.45039490379 30.984 3 -1.2546761598473144 0.3719079424825024 1.0 ['ENSG00000165156|ENST00000395571|ZHX1'] 77652 12083 NYYSTLSFT True PC9_epitope_Rep3 1094.49204082542 1094.49094993586 51.52 2 -1.2547074570548629 0.37190967011881626 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 131303 16231 VVQRGHRPP True H1975_Epitope_Rep2 1044.59409533888 1044.59298993586 67.642 2 -1.2547084954929453 0.37190967011881626 1.0 ['JAK3|p.S493R|1|0.45|ENSG00000105639|chr19:17838355-17838355|T/G|missense_variant'] 101414 10029 SNIPLQSVI True PC9_epitope_Rep1 969.5494961318899 969.54838993586 43.444 2 -1.2547317043542245 0.37190967011881626 1.0 ['ZDBF2|p.R991Kfs*12|1|0.31|ENSG00000204186|chr2:206307498-206307500|TAG/AA|frameshift_variant', 'ENSG00000204186|ENST00000374423|ZDBF2', 'ZDBF2|p.K1728Nfs*5|1|0.36|ENSG00000204186|chr2:206309704-206309704|A/-|frameshift_variant', 'ZDBF2|p.K1830Efs*11|1|0.49|ENSG00000204186|chr2:206310011-206310012|-/G|frameshift_variant', 'ZDBF2|p.E1965Kfs*36|1|0.08|ENSG00000204186|chr2:206310420-206310420|G/-|frameshift_variant'] 108636 25311 TEKLAQLIAT True PC9_epitope_Rep2 1086.62847472858 1086.62736993586 103.03 2 -1.2547346617395423 0.37190967011881626 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 44682 19535 IPMMYPAS True PC9_epitope_Rep3 908.41359690604 908.41248993586 80.373 2 -1.2547672908887273 0.37190967011881626 1.0 ['ENSG00000198691|ENST00000370225|ABCA4', 'ABCA4|p.V1774I|1|0.18|ENSG00000198691|chr1:94014683-94014683|C/T|missense_variant'] 83382 5965 QARRHHQF True PC9_epitope_Rep6 1078.55329315606 1078.55218993586 31.251 2 -1.2547924245158317 0.37191282101741613 1.0 ['ENST00000568495.5_1_16:67862172-67864127:-|nuORF', 'ENST00000436104.6_1_16:67862410-67864187:-|nuORF', 'ENST00000569862.5_1_16:67862172-67864187:-|nuORF', 'ENST00000562513.6_1_16:67862078-67865741:-|nuORF', 'ENSG00000102901|ENST00000562787|CENPT'] 69339 5820 LVPTHAYA True NCI_RA007_Epitope_Rep2 870.4599528514999 870.45884993586 27.258 2 -1.2548009765985784 0.37191282101741613 1.0 ['ENSG00000131375|ENST00000253693|CAPN7'] 67784 18146 LTHLPFLNK True PC9_epitope_Rep5 1081.62841515893 1081.62730993586 74.808 2 -1.2548030548756202 0.37192054609187625 1.0 ['ENST00000337190.6_1_4:2251252-2251459:-|nuORF'] 68212 18514 LTQLLTAAKP True PC9_epitope_Rep4 1054.63864548946 1054.63754993586 79.287 2 -1.254837110956107 0.3719282709763117 1.0 ['nc|ENSG00000009950|Q9NP71-5|MLXIPL', 'MLXIPL|p.A789Qfs*28|1|0.14|ENSG00000009950|chr7:73594349-73594349|C/-|frameshift_variant', 'nc|ENSG00000009950|Q9NP71-4|MLXIPL', 'nc|ENSG00000009950|Q9NP71-2|MLXIPL', 'nc|ENSG00000009950|Q9NP71-3|MLXIPL', 'ENSG00000009950|ENST00000313375|MLXIPL', 'ENST00000467221.1_1_7:73010882-73011686:-|nuORF', 'nc|ENSG00000009950|Q9NP71-6|MLXIPL'] 7694 316 ASQDCCCCCYS True H1975_Epitope_Rep2 1184.30650826216 1184.30540993586 1.7289 2 -1.2548992560996821 0.3719425964411761 1.0 ['ENST00000373053.7_2_10:74647032-74647206:+|nuORF'] 100414 7144 SLPAAITTP True NCI_RA007_Epitope_Rep5 869.48583324617 869.48472993586 34.155 2 -1.2549342185066246 0.3719425964411761 1.0 ['ENST00000489337.5_1_22:31484532-31494796:+|nuORF', 'ENST00000493335.5_1_22:31492537-31494796:+|nuORF'] 55096 7439 LALNRDHLL True NCI_RA007_Epitope_Rep4 1063.61382772395 1063.6127299358602 35.258 2 -1.2549450540635643 0.3719425964411761 1.0 ['NUP210L|p.D1435H|1|0.11|ENSG00000143552|chr1:154022339-154022339|C/G|missense_variant'] 68924 6939 LVFMAELFWWF True H1975_Epitope_Rep1 1487.7311659753098 1487.72953490379 31.733 3 -1.2549612686929368 0.3719425964411761 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'CAMSAP2-CARS|1|fusion', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 11282 10981 DESFANVLK True H1975_Epitope_Rep1 1021.5080252427299 1021.5074749679301 47.203 1 -1.2549709140866139 0.3719425964411761 1.0 ['ERICH3|p.E666A|1|0.37|ENSG00000178965|chr1:74589810-74589810|T/G|missense_variant'] 5304 9388 ALSEWWDLYSR True NCI_RA007_Epitope_Rep2 1424.67246479888 1424.6713699358602 41.127 2 -1.254985064691121 0.3719425964411761 1.0 ['ENST00000401884.5_2_2:241974133-241976762:+|nuORF'] 62542 3841 LLTFEDMA True NCI_RA007_Epitope_Rep2 938.4419198288599 938.44082993586 19.574 2 -1.2550246559622464 0.3719425964411761 1.0 ['nc|ENSG00000288393|Q92670|ZNF75CP'] 57415 8652 LEIHFFPL True H1975_Epitope_Rep2 1014.5538532363399 1014.55274993586 38.239 2 -1.255028509217579 0.3719425964411761 1.0 ['ENST00000468823.1_1_X:100653763-100655794:-|nuORF'] 104177 25658 SSDDDDDDDD True H1975_Epitope_Rep3 1112.29016568288 1112.2890699358602 106.79 2 -1.2550965887596186 0.3719425964411761 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A'] 20013 6574 EMMWRICPAL True PC9_epitope_Rep3 1248.5817419436398 1248.58064993586 30.311 2 -1.2551188784444325 0.3719425964411761 1.0 ['nc|ENSG00000161618|Q8IZ83-3|ALDH16A1', 'ENSG00000161618|ENST00000293350|ALDH16A1', 'nc|ENSG00000161618|Q8IZ83-2|ALDH16A1', 'ENST00000599652.5_1_19:49956588-49965222:+|nuORF'] 93426 20130 RRYRRNFNYRR True H1975_Epitope_Rep3 1655.8981566856696 1655.8970499358602 84.22 2 -1.2551416703152882 0.3719425964411761 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 103976 16741 SRRKRAKVEYR True NCI_RA007_Epitope_Rep1 1447.8484125285897 1447.84730993586 69.244 2 -1.2551543996093875 0.3719425964411761 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 134383 23504 WSRARKWTRS True PC9_epitope_Rep2 1332.7163357298798 1332.7152299358602 95.883 2 -1.2551853184902433 0.3719425964411761 1.0 ['ENST00000392795.7_1_17:62006109-62006328:-|nuORF'] 41334 5052 IALETAMT True PC9_epitope_Rep3 848.43135514516 848.43024993586 24.519 2 -1.25524073610339 0.3719826367113046 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 78443 22903 PCIICCVC True NCI_RA007_Epitope_Rep3 852.33660953864 852.33550993586 99.546 2 -1.255243784089213 0.3719826367113046 1.0 ['ENSG00000137393|ENST00000259939|RNF144B', 'nc|ENSG00000137393|Q7Z419-2|RNF144B'] 128868 21084 VSSRTALNKGS True PC9_epitope_Rep6 1118.6043852390599 1118.6032899358602 93.925 2 -1.2552568017874939 0.3719903593123632 1.0 ['ENST00000570309.1_1_17:78175550-78175682:-|nuORF', 'ENST00000573346.5_1_17:78175550-78177620:-|nuORF'] 44311 4175 ILYQRFQRVVF True NCI_RA007_Epitope_Rep1 1467.83505388023 1467.83341490379 20.325 3 -1.255287129184404 0.3720103783677434 1.0 ['SELP|p.G663Vfs*17|1|0.32|ENSG00000174175|chr1:169596038-169596038|C/-|frameshift_variant', 'ENSG00000174175|ENST00000263686|SELP'] 29591 22916 FVKRKILEF True H1975_Epitope_Rep1 1178.7175645164998 1178.71646993586 95.296 2 -1.2553250476240452 0.3720303969307953 1.0 ['SCN2A|p.R1022L|1|0.27|ENSG00000136531|chr2:165354337-165354337|G/T|missense_variant'] 58761 8362 LFLSMLALTE True PC9_epitope_Rep4 1136.61513316356 1136.6140299358601 39.623 2 -1.255440949269813 0.372050415001537 1.0 ['OR51Q1|p.D72E|1|0.31|ENSG00000167360|chr11:5422416-5422416|C/A|missense_variant'] 35511 4912 GTGKKGKR True H1975_Epitope_Rep1 830.5086343794198 830.50752993586 23.97 2 -1.2554679157586126 0.3720581363893466 1.0 ['UGT2B4|p.R520G|1|0.18|ENSG00000156096|chr4:69480663-69480663|T/C|missense_variant'] 84245 5636 QEVLVSLD True H1975_Epitope_Rep3 901.47566248529 901.47456993586 26.716 2 -1.2555415535547083 0.3720904496661625 1.0 ['ENSG00000152467|ENST00000282326|ZSCAN1'] 42707 14595 IEYFRKAL True PC9_epitope_Rep3 1038.58621599378 1038.5851099358601 61.268 2 -1.2556463725543625 0.372125906799459 1.0 ['nc|ENSG00000076344|O94810-3|RGS11', 'nc|ENSG00000076344|O94810-2|RGS11', 'ENSG00000076344|ENST00000397770|RGS11'] 134688 12352 WWQPWWWWKLQ True H1975_Epitope_Rep1 1728.8353882333997 1728.8337449037901 52.542 3 -1.2556565770660886 0.372125906799459 1.0 ['chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 60746 11483 LKDIIWVRAP True PC9_epitope_Rep4 1209.72337817293 1209.7217249037901 51.932 3 -1.255711730753034 0.372125906799459 1.0 ['ENST00000262187.9_1_7:151163972-151164125:-|nuORF'] 103131 9604 SQLWFREFFL True NCI_RA007_Epitope_Rep1 1371.6975573479097 1371.69646993586 41.355 2 -1.2557720050583505 0.37217051308849025 1.0 ['ENSG00000055163|ENST00000620254|CYFIP2', 'CYFIP2|p.A905Sfs*86|1|0.34|ENSG00000055163|chr5:157341122-157341122|G/TC|frameshift_variant', 'nc|ENSG00000055163|Q96F07|CYFIP2', 'CYFIP2|p.A905Cfs*86|1|0.46|ENSG00000055163|chr5:157341120-157341121|-/T|frameshift_variant', 'ENSG00000273749|ENST00000617928|CYFIP1', 'nc|ENSG00000273749|Q7L576-2|CYFIP1'] 100749 24074 SLRLRWLRQ True H1975_Epitope_Rep3 1226.7360085453 1226.73490993586 100.32 2 -1.2558695339770254 0.37217823243003983 1.0 ['ENSG00000178694|ENST00000314622|NSUN3'] 68076 12523 LTPAAPREALV True NCI_RA007_Epitope_Rep2 1136.65535818276 1136.6542699358602 53.325 2 -1.2559864974795818 0.37218137556249536 1.0 ['ENST00000493335.5_1_22:31492537-31494796:+|nuORF', 'ENST00000460658.5_1_22:31492537-31495228:+|nuORF'] 120390 14462 VFSFRCEV True PC9_epitope_Rep5 985.4691376362098 985.46804993586 60.628 2 -1.255989975554271 0.37218137556249536 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF'] 29615 16379 FVLLFFFFNFY True PC9_epitope_Rep1 1502.7638460025796 1502.76274993586 67.824 2 -1.25604958197408 0.37220453176291235 1.0 ['ENST00000450295.5_3_9:91992741-91993038:-|nuORF'] 16885 9262 EFYEAKLQ True PC9_epitope_Rep6 1026.5022115862998 1026.50110993586 45.779 2 -1.2560823321661694 0.37220453176291235 1.0 ['ENSG00000243710|ENST00000372492|CFAP57'] 77778 8060 PADIRLPE True NCI_RA007_Epitope_Rep4 909.4919812557699 909.49088993586 37.781 2 -1.2561032420561573 0.37220453176291235 1.0 ['ENST00000522234.5_1_X:47078210-47085639:+|nuORF', 'ENST00000428400.5_1_X:47082893-47085639:+|nuORF', 'ENSG00000102225|ENST00000357227|CDK16', 'nc|ENSG00000102225|Q00536-3|CDK16', 'nc|ENSG00000102225|Q00536-2|CDK16'] 66915 18723 LSYAGQYV True PC9_epitope_Rep4 899.4388830537499 899.43778993586 80.099 2 -1.2561231391422376 0.37222454449334874 1.0 ['ENSG00000174371|ENST00000366548|EXO1', 'nc|ENSG00000174371|Q9UQ84-4|EXO1'] 115251 15481 TVDFGTGS True NCI_RA007_Epitope_Rep3 782.34464831574 782.34409496793 68.454 1 -1.2562160656048817 0.37224455673170315 1.0 ['nc|ENSG00000170266|P16278-3|GLB1', 'nc|ENSG00000170266|P16278|GLB1', 'ENSG00000170266|ENST00000307363|GLB1'] 30788 12103 GAPIGNTF True PC9_epitope_Rep5 775.38645355807 775.38534993586 51.548 2 -1.2563335317230386 0.37226313266046246 1.0 ['nc|ENSG00000138674|O94979-6|SEC31A', 'nc|ENSG00000138674|O94979-3|SEC31A', 'nc|ENSG00000138674|O94979-10|SEC31A', 'nc|ENSG00000138674|O94979-4|SEC31A', 'nc|ENSG00000138674|O94979-9|SEC31A', 'nc|ENSG00000138674|O94979-2|SEC31A', 'ENSG00000138674|ENST00000395310|SEC31A', 'nc|ENSG00000138674|O94979-8|SEC31A', 'nc|ENSG00000138674|O94979-7|SEC31A'] 600 5975 AASCLENNFF True NCI_RA007_Epitope_Rep4 1114.47534521546 1114.4742499358601 29.603 2 -1.256339772002901 0.37226313266046246 1.0 ['ENST00000256015.4_1_12:92539441-92539582:-|nuORF'] 87100 19960 QSERNYLWREE True H1975_Epitope_Rep1 1508.70080480504 1508.69970993586 83.076 2 -1.2563575389511996 0.37226313266046246 1.0 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.D681Mfs*9|1|0.2|ENSG00000108055|chr10:110596475-110596475|G/-|frameshift_variant'] 58958 8118 LFYGRDVN True NCI_RA007_Epitope_Rep3 982.4872302284999 982.48612993586 39.036 2 -1.2563973140719593 0.37226313266046246 1.0 ['nc|ENSG00000082126|Q96JB8-3|MPP4', 'ENST00000486212.6_1_2:202531091-202563346:-|nuORF', 'ENST00000483841.2_1_2:202545559-202558746:-|nuORF', 'nc|ENSG00000082126|Q96JB8-5|MPP4', 'nc|ENSG00000082126|Q96JB8-2|MPP4', 'nc|ENSG00000082126|Q96JB8-4|MPP4', 'ENSG00000082126|ENST00000409474|MPP4'] 137940 7888 YPSRWTYIEFY True H1975_Epitope_Rep1 1523.70851595443 1523.7074099358601 35.293 2 -1.256427248071988 0.37228942321876385 1.0 ['ENSG00000128833|ENST00000261839|MYO5C', 'ENST00000560809.5_1_15:52532054-52548856:-|nuORF', 'ENST00000558902.5_1_15:52529812-52548856:-|nuORF'] 3723 10393 AGSPIQASVP True PC9_epitope_Rep6 925.48689587533 925.48578993586 50.709 2 -1.2564838444890403 0.37228942321876385 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2', 'nc|ENSG00000148204|Q5IJ48-3|CRB2'] 17942 14026 EIEQFLNEKRQ True H1975_Epitope_Rep3 1432.7310423041597 1432.72994993586 59.272 2 -1.2564937676358243 0.37228942321876385 1.0 ['ENSG00000196422|ENST00000356818|PPP1R26'] 820 8703 ADCPMRLV True PC9_epitope_Rep4 903.43064395251 903.42954993586 40.97 2 -1.2565316592833833 0.37228942321876385 1.0 ['GABRA6|p.N153K|1|0.04|ENSG00000145863|chr5:161689266-161689266|T/A|missense_variant', 'GABRA6|p.Y194Tfs*3|1|0.25|ENSG00000145863|chr5:161689684-161689684|T/-|frameshift_variant', 'GABRA6|p.S182Vfs*15|1|0.25|ENSG00000145863|chr5:161689647-161689647|A/-|frameshift_variant', 'GABRA6|p.N329Ifs*19|1|0.36|ENSG00000145863|chr5:161692097-161692097|C/-|frameshift_variant', 'GABRA6|p.A339Hfs*9|1|0.44|ENSG00000145863|chr5:161692128-161692128|G/-|frameshift_variant', 'ENSG00000145863|ENST00000274545|GABRA6'] 128990 15051 VSWPFLLYMLV True PC9_epitope_Rep1 1366.73591700258 1366.73428490379 62.711 3 -1.2565405897481778 0.37228942321876385 1.0 ['nc|ENSG00000001461|Q6P499-3|NIPAL3', 'NIPAL3|p.A273Cfs*51|1|0.5|ENSG00000001461|chr1:24458928-24458929|-/T|frameshift_variant', 'nc|ENSG00000001461|Q6P499-2|NIPAL3', 'ENSG00000001461|ENST00000374399|NIPAL3'] 122533 4907 VGSTVRNK True PC9_epitope_Rep3 859.48756458167 859.48646993586 23.972 2 -1.2565868654507961 0.372297139485427 1.0 ['nc|ENSG00000111785|Q9NVN3-4|RIC8B', 'nc|ENSG00000111785|Q9NVN3-3|RIC8B', 'nc|ENSG00000111785|Q9NVN3|RIC8B', 'nc|ENSG00000111785|Q9NVN3-1|RIC8B', 'ENSG00000111785|ENST00000392837|RIC8B'] 66455 3512 LSRQPRDFG True H1975_Epitope_Rep3 1074.55704112382 1074.55594993586 18.442 2 -1.2566048018914135 0.37231714812538413 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 11338 6466 DEYKQYYYEAR True NCI_RA007_Epitope_Rep2 1526.66777334126 1526.66666993586 29.76 2 -1.2566588827212133 0.3723248638615383 1.0 ['nc|ENSG00000100626|Q8N428-2|GALNT16', 'ENSG00000100626|ENST00000448469|GALNT16'] 109069 18098 TFDVPGEFLIF True PC9_epitope_Rep4 1283.64379043955 1283.64268993586 77.68 2 -1.2566641191181256 0.37233257940800474 1.0 ['ENST00000583490.1_1_18:19748270-19748778:-|nuORF'] 103389 13942 SQVYIDGSI True PC9_epitope_Rep5 980.4814761417199 980.48036993586 58.649 2 -1.2567484032569485 0.37237717109387486 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 62041 15330 LLLVSSPP True NCI_RA007_Epitope_Rep4 824.50075503432 824.50020496793 66.625 1 -1.2568542506613356 0.37240946972490596 1.0 ['ENST00000428865.2_1_6:74404306-74404579:-|nuORF'] 62988 18669 LNENKQERDKE True H1975_Epitope_Rep1 1401.68482038773 1401.6837299358601 77.858 2 -1.2569223093532416 0.3724786429844509 1.0 ['nc|ENSG00000063244|P26368-2|U2AF2', 'ENSG00000063244|ENST00000308924|U2AF2'] 44016 12769 ILKCWRESEKP True NCI_RA007_Epitope_Rep2 1387.7282058531896 1387.7271099358602 54.286 2 -1.2570623251076845 0.37249287189066954 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2'] 10591 23418 CRRRRPRPEA True PC9_epitope_Rep2 1295.71053915679 1295.7088949037902 95.55 3 -1.257076897309497 0.37249287189066954 1.0 ['ENST00000480661.1_1_1:6259306-6259615:-|nuORF'] 25702 22463 FFGGIFRLKT True PC9_epitope_Rep4 1184.67061432408 1184.6700749679298 94.636 1 -1.2571474222445296 0.37249287189066954 1.0 ['nc|ENSG00000010030|Q9Y603-6|ETV7', 'nc|ENSG00000010030|Q9Y603-5|ETV7', 'nc|ENSG00000010030|Q9Y603-3|ETV7', 'nc|ENSG00000010030|Q9Y603-7|ETV7', 'nc|ENSG00000010030|Q9Y603-2|ETV7', 'nc|ENSG00000010030|Q9Y603-4|ETV7', 'ENSG00000010030|ENST00000340181|ETV7'] 105 18076 AAASKKKP True PC9_epitope_Rep4 799.49158733295 799.49048993586 77.591 2 -1.2571486359717594 0.37249287189066954 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 86980 4060 QRVRQEESEQ True H1975_Epitope_Rep2 1287.61674082791 1287.6151049037899 20.703 3 -1.257155465357544 0.37249287189066954 1.0 ['CON__P08729', 'ENSG00000135480|ENST00000331817|KRT7', 'CON__Q3KNV1'] 130662 6052 VVCAPGTRE True NCI_RA007_Epitope_Rep4 930.4593012285 930.4582099358599 29.896 2 -1.2571621524105892 0.37249287189066954 1.0 ['ENST00000379589.3_1_13:40175494-40177154:-|nuORF'] 34996 25147 GRALWHLRLA True NCI_RA007_Epitope_Rep2 1191.69889476059 1191.6972449037899 105.91 3 -1.2571847217608727 0.37249287189066954 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 121861 12227 VGPAGPFF True PC9_epitope_Rep5 790.40137534622 790.40026993586 52.019 2 -1.2572030921289 0.37249287189066954 1.0 ['ENSG00000165606|ENST00000374139|DRGX'] 97477 17616 SGLITSPNW True PC9_epitope_Rep1 973.48689587533 973.48578993586 72.552 2 -1.25721823109735 0.37249287189066954 1.0 ['ENSG00000038295|ENST00000061240|TLL1'] 99772 8218 SLGPAAAKPD True H1975_Epitope_Rep2 925.48689587533 925.48578993586 36.563 2 -1.2572208299943242 0.37249287189066954 1.0 ['ENSG00000106479|ENST00000223210|ZNF862', 'ZNF862|p.S759Afs*17|1|0.48|ENSG00000106479|chr7:149861434-149861435|-/GCCTCTCTCTCCTGCTTAGTCCCTATGTTTCT|frameshift_variant'] 15669 24106 ECGHGRFQWTL True PC9_epitope_Rep3 1332.6033396932398 1332.60169490379 98.006 3 -1.2572409795015647 0.37249287189066954 1.0 ['SV2A|p.E490Sfs*3|1|0.38|ENSG00000159164|chr1:149908118-149908118|C/-|frameshift_variant', 'nc|ENSG00000159164|Q7L0J3-2|SV2A', 'ENSG00000159164|ENST00000369146|SV2A'] 105063 22264 STKGLSTLEM True PC9_epitope_Rep2 1065.53761111885 1065.53650993586 91.118 2 -1.2572610667558106 0.37249287189066954 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 120207 22583 VFLVICIVV True PC9_epitope_Rep2 1003.6140109647498 1003.61290993586 92.366 2 -1.257264375151108 0.37249287189066954 1.0 ['nc|ENSG00000166145|O43278|SPINT1', 'ENSG00000166145|ENST00000562057|SPINT1', 'ENST00000563135.5_1_15:41146443-41149170:+|nuORF'] 14751 7257 DVVMASLLRMF True NCI_RA007_Epitope_Rep1 1280.6621004393198 1280.66044490379 32.218 3 -1.2573387249501529 0.37250058376040013 1.0 ['ENSG00000108424|ENST00000290158|KPNB1', 'nc|ENSG00000108424|Q14974-2|KPNB1'] 19291 16404 ELLRRKDTHIR True NCI_RA007_Epitope_Rep2 1435.83717913855 1435.8360899358602 68.536 2 -1.2573691479179367 0.37250829544058006 1.0 ['ENSG00000107560|ENST00000355624|RAB11FIP2', 'nc|ENSG00000107560|Q7L804-2|RAB11FIP2', 'ENST00000476207.1_1_10:119765292-119774614:-|nuORF'] 2830 19239 AEVKELKKQL True PC9_epitope_Rep3 1184.7128730588797 1184.71176993586 79.223 2 -1.2575329725908564 0.37254058571235454 1.0 ['nc|ENSG00000188554|Q14596-2|NBR1', 'ENSG00000188554|ENST00000590996|NBR1'] 29139 5606 FTTPLTPS True NCI_RA007_Epitope_Rep1 862.44363408102 862.44252993586 25.87 2 -1.257696320902211 0.3725728751904832 1.0 ['ENSG00000117724|ENST00000366955|CENPF'] 49474 24806 KIYEEKKKKTT True NCI_RA007_Epitope_Rep1 1394.8133153761398 1394.8122099358602 102.69 2 -1.257862498399614 0.3726420311405503 1.0 ['ENSG00000115677|ENST00000310931|HDLBP', 'HDLBP|p.K959Vfs*2|1|0.37|ENSG00000115677|chr2:241236643-241236644|TT/-|frameshift_variant', 'ENST00000470710.1_1_2:242194755-242195742:-|nuORF'] 35335 11945 GSVVGNLAK True PC9_epitope_Rep5 843.4814165720699 843.48030993586 50.945 2 -1.2579844084508607 0.3726574500768049 1.0 ['nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7', 'ENSG00000254122|ENST00000398594|PCDHGB7', 'nc|ENSG00000253305|Q9Y5F9-2|PCDHGB6', 'ENSG00000253305|ENST00000520790|PCDHGB6'] 36487 9974 GVIYRLLYQ True NCI_RA007_Epitope_Rep4 1123.6389798426299 1123.6378899358601 45.208 2 -1.2579925381714905 0.3726574500768049 1.0 ['ENST00000585357.1_1_19:38780610-38781349:+|nuORF'] 31607 11085 GEGEEARTWD True H1975_Epitope_Rep3 1148.47343063916 1148.4723299358602 47.731 2 -1.2581529626410584 0.3726714180388302 1.0 ['nc|ENSG00000142102|Q32M88-2|PGGHG', 'ENST00000474221.5_1_11:289135-291269:+|nuORF', 'ENSG00000142102|ENST00000409548|PGGHG'] 117758 25706 VALKPLGGL True PC9_epitope_Rep1 866.5589386167799 866.55784993586 103.92 2 -1.2581911900624598 0.3726714180388302 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 121994 6838 VGQFSKREK True NCI_RA007_Epitope_Rep3 1077.5930922793698 1077.59198993586 34.01 2 -1.258293200925355 0.3726714180388302 1.0 ['nc|ENSG00000152670|Q9NQI0-3|DDX4', 'nc|ENSG00000152670|Q9NQI0-2|DDX4', 'nc|ENSG00000152670|Q9NQI0-4|DDX4', 'ENSG00000152670|ENST00000505374|DDX4'] 134772 14830 WYDRFWLFFLP True H1975_Epitope_Rep3 1588.78670670548 1588.78560993586 62.425 2 -1.2583016464167578 0.3726714180388302 1.0 ['ENSG00000170915|ENST00000442253|PAQR8'] 59116 11755 LGEIIACLQFS True NCI_RA007_Epitope_Rep2 1192.61619579272 1192.6150899358602 50.322 2 -1.2583049750428401 0.3726714180388302 1.0 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 74302 12162 NIKKAQKLI True NCI_RA007_Epitope_Rep2 1054.68626438822 1054.6851699358601 51.903 2 -1.2583405947424682 0.37269141445792014 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 122995 8029 VGWSDSYTCEY True PC9_epitope_Rep5 1308.49686850568 1308.4957699358602 35.822 2 -1.2583887731832593 0.37270995883762364 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 6191 7527 APQPLNLVS True PC9_epitope_Rep5 937.52328138405 937.52218993586 33.902 2 -1.2584165985876419 0.37270995883762364 1.0 ['nc|ENSG00000285708|Q9H334-6|FOXP1', 'nc|ENSG00000285708|Q9H334-3|FOXP1', 'nc|ENSG00000285708|Q9H334-7|FOXP1', 'ENSG00000114861|ENST00000649528|FOXP1', 'nc|ENSG00000285708|Q9H334-4|FOXP1', 'nc|ENSG00000285708|Q9H334-8|FOXP1'] 3048 18553 AFVTLTGLDVV True PC9_epitope_Rep4 1133.63322575585 1133.6321299358601 79.439 2 -1.258421464906652 0.37270995883762364 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11', 'ENST00000504526.1_1_4:184580477-184587420:+|nuORF'] 123983 5095 VKKLLLFLK True PC9_epitope_Rep1 1100.7685374602 1100.7674499358602 24.452 2 -1.2584612778543016 0.37270995883762364 1.0 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 130176 9976 VTRSVSVP True PC9_epitope_Rep1 843.48141657207 843.48030993586 43.238 2 -1.258558185011472 0.3727299535546654 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000482952.5_1_2:233671364-233680450:+|nuORF'] 56916 12137 LEDRKYLP True PC9_epitope_Rep3 1032.56039516876 1032.55928993586 51.725 2 -1.258580006064471 0.3727376608057798 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7', 'ENST00000479983.1_1_1:62958359-62960107:-|nuORF'] 46159 9807 ITCTVVDFC[Carbamidomethyl]K True H1975_Epitope_Rep2 1184.5569669438698 1184.55586993586 42.709 2 -1.2586944841474417 0.3727899347577682 1.0 ['ENSG00000136011|ENST00000388887|STAB2'] 111250 5177 TLGPRGSLS True PC9_epitope_Rep2 886.4872302285 886.48612993586 25.298 2 -1.2587566208916916 0.3727899347577682 1.0 ['ENST00000335295.4_1_11:5247937-5248187:-|nuORF'] 94458 17750 RYFVLGTV True PC9_epitope_Rep2 953.5334521449298 953.53234993586 73.557 2 -1.258865164511503 0.37283450055289347 1.0 ['nc|ENSG00000172046|O94966|USP19', 'nc|ENSG00000172046|O94966-5|USP19'] 88805 12404 RDRGYIYWR True H1975_Epitope_Rep2 1283.65233849099 1283.65069490379 52.798 3 -1.258922283885479 0.37287448397876943 1.0 ['nc|ENSG00000006125|P63010-3|AP2B1', 'nc|ENSG00000006125|P63010|AP2B1', 'ENSG00000006125|ENST00000610402|AP2B1', 'nc|ENSG00000100280|Q10567-3|AP1B1', 'nc|ENSG00000100280|Q10567-2|AP1B1', 'ENSG00000100280|ENST00000357586|AP1B1', 'nc|ENSG00000100280|Q10567-4|AP1B1'] 129992 8435 VTPGHEEEEPV True NCI_RA007_Epitope_Rep1 1221.55134660669 1221.5502499358602 36.809 2 -1.2589302269579563 0.37287448397876943 1.0 ['ENSG00000178685|ENST00000313028|PARP10', 'ENST00000526007.5_1_8:145051654-145057989:-|nuORF'] 93922 26144 RVKKGGGKK True PC9_epitope_Rep5 956.6243328379998 956.6237849679301 106.25 1 -1.2589605332358231 0.3728792737011511 1.0 ['ENSG00000100811|ENST00000262238|YY1'] 77734 5248 PAANVARK True PC9_epitope_Rep3 825.48208527841 825.48098993586 25.265 2 -1.2589914568233904 0.3728792737011511 1.0 ['ENSG00000180720|ENST00000682254|CHRM4'] 74651 7923 NLFYWATYLNR True PC9_epitope_Rep2 1459.72483472491 1459.72318490379 35.841 3 -1.258997853779771 0.3728792737011511 1.0 ['GABRA5|p.V443F|1|0.32|ENSG00000186297|chr15:26948171-26948171|G/T|missense_variant'] 46406 16089 ITKEKLHTI True PC9_epitope_Rep2 1081.6495445263301 1081.64844993586 67.143 2 -1.259009899928477 0.3728792737011511 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 128525 10300 VSGMQSYK True PC9_epitope_Rep5 898.42185309062 898.42074993586 44.607 2 -1.2590210208622559 0.3728792737011511 1.0 ['nc|ENSG00000290584|Q9P1P4|TAAR3P'] 75095 865 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 4.7879 3 -1.2590246443236788 0.3728792737011511 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 99506 16359 SLERSPEKI True PC9_epitope_Rep2 1057.57677350889 1057.57566993586 68.17 2 -1.259031552333505 0.3728792737011511 1.0 ['ENSG00000022840|ENST00000325954|RNF10', 'nc|ENSG00000022840|Q8N5U6-2|RNF10'] 54656 8740 LADTRVTQSSI True NCI_RA007_Epitope_Rep2 1189.63026563373 1189.62916993586 38.643 2 -1.2590864181209926 0.3728992628992629 1.0 ['ENSG00000078898|ENST00000170150|BPIFB2'] 102225 17208 SPSQMMPHV True PC9_epitope_Rep1 1012.4470222926399 1012.44592993586 71.009 2 -1.2591228443848663 0.37290133994915314 1.0 ['nc|ENSG00000171100|Q13496-2|MTM1', 'ENSG00000171100|ENST00000370396|MTM1'] 121129 14166 VGGGCGSG True NCI_RA007_Epitope_Rep4 592.2275103885199 592.22696496793 61.769 1 -1.259139362192191 0.37290133994915314 1.0 ['ENST00000474219.1_1_3:80265926-80266142:+|nuORF'] 80663 15089 PLPPQPRRRP True H1975_Epitope_Rep2 1212.7203584811598 1212.7187249037902 63.192 3 -1.2592078465853702 0.37290133994915314 1.0 ['SCRT1|p.F15Sfs*192|1|0.15|ENSG00000261678|chr8:144336128-144336128|C/-|frameshift_variant'] 75081 1180 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 6.5011 3 -1.2592213556826062 0.37290133994915314 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 30175 6630 FYTIFRFFEQR True H1975_Epitope_Rep3 1552.7826839541997 1552.7815899358602 30.456 2 -1.2592461784041333 0.37290133994915314 1.0 ['ENSG00000141452|ENST00000269221|RMC1', 'ENST00000591367.5_1_18:21109371-21111665:+|nuORF'] 121164 13267 VGGICLWL True NCI_RA007_Epitope_Rep5 859.4625957037899 859.46148993586 57.711 2 -1.259249660301569 0.37290133994915314 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 114535 24155 TSHGLRRHPS True PC9_epitope_Rep3 1146.6006372713 1146.59899490379 98.201 3 -1.2593045237236336 0.37290133994915314 1.0 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 44639 9609 IPKDQWMKKW True NCI_RA007_Epitope_Rep1 1358.7169128934997 1358.71525490379 41.374 3 -1.2593320706615485 0.37290133994915314 1.0 ['nc|ENSG00000130234|Q9BYF1-3|ACE2', 'ENSG00000130234|ENST00000252519|ACE2'] 90098 1663 RGRARRSKGK True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 8.8037 3 -1.2593459135625673 0.37290133994915314 1.0 ['ENSG00000223569|ENST00000456464|USP17L15', 'ENSG00000232399|ENST00000429667|USP17L13', 'ENSG00000250844|ENST00000504209|USP17L18', 'ENSG00000250745|ENST00000506151|USP17L20', 'ENSG00000249811|ENST00000506414|USP17L21', 'ENSG00000249104|ENST00000511568|USP17L17', 'ENSG00000248933|ENST00000511280|USP17L22', 'ENSG00000235780|ENST00000515574|USP17L27', 'ENSG00000233136|ENST00000457736|USP17L11', 'ENSG00000248920|ENST00000515566|USP17L19', 'ENSG00000232264|ENST00000504481|USP17L24', 'ENSG00000231637|ENST00000511681|USP17L29', 'ENSG00000231051|ENST00000504543|USP17L28', 'ENSG00000230430|ENST00000509271|USP17L25', 'ENSG00000229579|ENST00000509660|USP17L26', 'ENSG00000228856|ENST00000504104|USP17L30', 'ENSG00000227551|ENST00000415041|USP17L12', 'ENSG00000227140|ENST00000507227|USP17L5'] 69647 18820 LVVRWAVL True PC9_epitope_Rep5 954.6014721350998 954.60036993586 77.404 2 -1.2593612525582651 0.37290133994915314 1.0 ['ENST00000593254.1_1_17:73774678-73775846:-|nuORF', 'ENST00000589599.5_2_17:73775264-73775846:-|nuORF', 'ENST00000254810.8_2_17:73775146-73775846:-|nuORF'] 101430 1128 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 6.1435 2 -1.259382577009954 0.37290133994915314 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 12757 10262 DLGVLYDWK True NCI_RA007_Epitope_Rep2 1107.5600608155898 1107.5589699358602 44.509 2 -1.259451403816258 0.37290133994915314 1.0 ['nc|ENSG00000174485|Q7Z401|DENND4A', 'nc|ENSG00000174485|Q7Z401-2|DENND4A', 'ENSG00000174485|ENST00000443035|DENND4A', 'ENST00000568515.1_1_15:66007788-66048788:-|nuORF'] 56520 21893 LDTWKRWREAL True PC9_epitope_Rep5 1472.7888319637998 1472.7877299358602 89.249 2 -1.2594580257337897 0.37290133994915314 1.0 ['ENST00000586500.1_1_19:13993617-13994323:-|nuORF'] 32311 21401 GFVHRIPP True PC9_epitope_Rep1 921.5184707871299 921.51736993586 87.154 2 -1.2595657665396172 0.37290133994915314 1.0 ['LGALS13|p.V121L|1|0.35|ENSG00000105198|chr19:39607280-39607280|G/C|missense_variant', 'ENSG00000105198|ENST00000221797|LGALS13'] 66180 16316 LSPIRNQLEIY True H1975_Epitope_Rep1 1344.74015043588 1344.73904993586 68.116 2 -1.2595911232891328 0.37290133994915314 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-2|DMD'] 59565 6036 LGRKETPK True NCI_RA007_Epitope_Rep4 927.5501648382299 927.54906993586 29.835 2 -1.2596324904143799 0.37290133994915314 1.0 ['ENST00000396821.7_1_22:38902257-38902299:-|nuORF'] 101735 13702 SPHFDGWY True PC9_epitope_Rep1 1007.4137309350699 1007.41262993586 57.556 2 -1.2596374948198807 0.37290133994915314 1.0 ['ENSG00000205593|ENST00000413817|DENND6B', 'ENST00000495607.5_1_22:50750570-50752368:-|nuORF'] 16460 13478 EELRKLLNFY True H1975_Epitope_Rep3 1323.71868671531 1323.7175899358601 57.118 2 -1.259656165827663 0.37290133994915314 1.0 ['ENSG00000104884|ENST00000391945|ERCC2', 'nc|ENSG00000104884|P18074-2|ERCC2', 'ENST00000586441.1_1_19:45867568-45872241:-|nuORF'] 62276 14229 LLQKQPRPWLW True NCI_RA007_Epitope_Rep2 1463.8401392606697 1463.8390499358602 60.008 2 -1.2597318099679182 0.37290133994915314 1.0 ['ENST00000541110.5_2_6:42330765-42418997:-|nuORF'] 83067 22755 PYLLFIGLL True PC9_epitope_Rep5 1047.63685458431 1047.63627496793 92.527 1 -1.259783583990982 0.37290133994915314 1.0 ['ENST00000374242.8_1_9:115449350-115449677:-|nuORF'] 79432 8453 PGPHGPNG True NCI_RA007_Epitope_Rep5 731.33508669155 731.33453496793 39.196 1 -1.2598220057442362 0.37290133994915314 1.0 ['ENSG00000204262|ENST00000374866|COL5A2'] 127814 15716 VRLIHLRLK True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 65.619 3 -1.2599030151587889 0.37291216348988016 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 75093 561 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 3.1059 3 -1.2599117005476077 0.37291216348988016 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 121706 6460 VGLPLHPG True NCI_RA007_Epitope_Rep4 788.45447354824 788.45336993586 31.447 2 -1.2599230860825201 0.37291216348988016 1.0 ['UMPS|p.R363P|1|0.15|ENSG00000114491|chr3:124740129-124740129|G/C|missense_variant'] 57647 12403 LELWVNYYIRW True NCI_RA007_Epitope_Rep1 1553.80308504561 1553.80198993586 52.22 2 -1.2601403312406219 0.37293984722324564 1.0 ['nc|ENSG00000171100|Q13496-2|MTM1', 'ENSG00000171100|ENST00000370396|MTM1'] 28145 23277 FRKKKREQ True PC9_epitope_Rep4 1118.6672602791398 1118.6661699358601 97.787 2 -1.2601525900881736 0.37293984722324564 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 37010 17582 GVRTQHRR True NCI_RA007_Epitope_Rep5 1008.5689432202 1008.56837496793 74.41 1 -1.2602801658560463 0.37295982904933256 1.0 ['nc|ENSG00000133107|Q9UBN4-5|TRPC4'] 102777 9060 SQEMNTLFRFW True PC9_epitope_Rep1 1457.6761702803296 1457.6750699358602 39.7 2 -1.2604025524990523 0.37299209117256965 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 119693 6509 VETCFIPK True NCI_RA007_Epitope_Rep5 935.4786396907499 935.47754993586 31.703 2 -1.2604453077218345 0.3730382886754918 1.0 ['nc|ENSG00000172139|Q4G0N8-2|SLC9C1', 'ENSG00000172139|ENST00000305815|SLC9C1', 'SLC9C1|p.S1038Yfs*4|1|0.36|ENSG00000172139|chr3:112169001-112169002|CT/-|frameshift_variant'] 87276 19101 QSSVVRCRPLT True NCI_RA007_Epitope_Rep4 1244.6659399497998 1244.66484993586 82.62 2 -1.2604703449161332 0.3730382886754918 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 44000 14253 ILHSASFFMLY True H1975_Epitope_Rep2 1327.66348033831 1327.6618349037901 59.974 3 -1.260493271688147 0.3730382886754918 1.0 ['ENSG00000177174|ENST00000317861|OR14C36', 'OR14C36|p.F105Lfs*28|2|0.22|ENSG00000177174|chr1:248349082-248349082|T/-|frameshift_variant', 'OR14C36|p.G39Efs*6|1|0.11|ENSG00000177174|chr1:248348888-248348888|G/-|frameshift_variant'] 16847 7391 EFRQYKRTYYM True NCI_RA007_Epitope_Rep3 1583.7554832301898 1583.7538349037902 36.199 3 -1.2604995407915445 0.3730382886754918 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1', 'ENST00000472697.5_1_3:142095319-142144369:-|nuORF'] 138745 8186 YSARHEVR True H1975_Epitope_Rep2 1016.5151763118399 1016.51406993586 36.438 2 -1.260504351643286 0.3730382886754918 1.0 ['nc|ENSG00000060656|Q92729-3|PTPRU', 'ENSG00000060656|ENST00000373779|PTPRU', 'nc|ENSG00000060656|Q92729-4|PTPRU', 'nc|ENSG00000060656|Q92729|PTPRU'] 135413 15166 YDRRRRDKFRR True NCI_RA007_Epitope_Rep2 1622.8978223324996 1622.89672993586 63.684 2 -1.2605316126688266 0.3730382886754918 1.0 ['nc|ENSG00000087087|Q9BXP5-5|SRRT', 'nc|ENSG00000087087|Q9BXP5-4|SRRT', 'nc|ENSG00000087087|Q9BXP5-2|SRRT', 'nc|ENSG00000087087|Q9BXP5-3|SRRT', 'ENSG00000087087|ENST00000611405|SRRT'] 45849 15679 ISQFRNDFRQY True NCI_RA007_Epitope_Rep2 1472.71606094636 1472.7149699358602 65.704 2 -1.2605824526338731 0.373039944007171 1.0 ['ENST00000566049.5_1_16:19078961-19089477:+|nuORF'] 81208 19268 PPLMLIIF True NCI_RA007_Epitope_Rep5 942.5612471159 942.56014993586 80.979 2 -1.260695263204272 0.373039944007171 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 89964 1924 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 10.154 3 -1.2606961864695398 0.373039944007171 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 46118 15011 ITAEVFKKHGV True PC9_epitope_Rep1 1227.6975573479099 1227.69646993586 62.559 2 -1.260723458224051 0.373039944007171 1.0 ['ENSG00000146701|ENST00000315758|MDH2'] 35148 23317 GSAIQRLRCEL True PC9_epitope_Rep5 1244.6659399497998 1244.66428490379 94.668 3 -1.2607245269590945 0.373039944007171 1.0 ['ENST00000491834.5_1_3:3195556-3195715:-|nuORF', 'ENST00000459840.5_1_3:3192551-3196584:-|nuORF', 'nc|ENSG00000113851|Q96SW2-2|CRBN', 'ENSG00000113851|ENST00000231948|CRBN'] 24443 8569 FAGNPGEKGN True PC9_epitope_Rep3 989.4566583762099 989.45556993586 37.913 2 -1.2607887999423286 0.3730492970716434 1.0 ['nc|ENSG00000169031|Q01955-5|COL4A3', 'nc|ENSG00000169031|Q01955-4|COL4A3', 'nc|ENSG00000169031|Q01955-3|COL4A3', 'nc|ENSG00000169031|Q01955-2|COL4A3', 'ENSG00000169031|ENST00000396578|COL4A3'] 47151 15356 IWNTFFHERYL True PC9_epitope_Rep5 1524.7513838259201 1524.74917987172 64.076 4 -1.2608061279777043 0.3730492970716434 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 64139 9416 LQEPMYYFL True NCI_RA007_Epitope_Rep1 1202.56818297114 1202.5670899358602 40.619 2 -1.260826304887279 0.3730492970716434 1.0 ['OR51I2|p.H56Q|1|0.25|ENSG00000187918|chr11:5453656-5453656|T/G|missense_variant'] 61606 15730 LLGRSHDTV True PC9_epitope_Rep2 996.53524305008 996.53414993586 65.776 2 -1.2608335281791854 0.3730492970716434 1.0 ['ENSG00000135953|ENST00000258436|MFSD9'] 52265 15593 KNPHRCTP True NCI_RA007_Epitope_Rep5 951.47086897171 951.46976993586 66.685 2 -1.2608399476167529 0.3730492970716434 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6', 'nc|ENSG00000119121|Q9BX84-6|TRPM6', 'nc|ENSG00000119121|Q9BX84-5|TRPM6', 'nc|ENSG00000119121|Q9BX84-7|TRPM6'] 114603 16379 TSLRVGRK True NCI_RA007_Epitope_Rep3 915.5613982282699 915.56030993586 72.155 2 -1.2608628864917466 0.3730492970716434 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 16858 19214 EFSISSNIIQF True PC9_epitope_Rep5 1283.63976768827 1283.6386699358602 78.946 2 -1.2608833701744553 0.373052414453571 1.0 ['ENSG00000180332|ENST00000379108|KCTD4'] 114305 10691 TSALSKKP True PC9_epitope_Rep3 830.48616759934 830.48506993586 46.07 2 -1.2609252177759318 0.373052414453571 1.0 ['nc|ENSG00000135314|Q4VXA5|KHDC1', 'ENSG00000135314|ENST00000257765|KHDC1'] 112438 23547 TNLRQLTKTSR True PC9_epitope_Rep1 1316.75244645508 1316.7513499358602 95.365 2 -1.26102929603648 0.37306780930398165 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 11647 11467 DHCKYKYL True NCI_RA007_Epitope_Rep3 1068.5062514209199 1068.5051499358601 52.225 2 -1.2610295334653432 0.37306780930398165 1.0 ['ENST00000486607.5_1_3:119198882-119211282:+|nuORF', 'ENSG00000163389|ENST00000295588|POGLUT1'] 16032 9428 EEAEVFIVKM True NCI_RA007_Epitope_Rep1 1193.6002113754098 1193.59910993586 40.667 2 -1.261143712911399 0.3730877839165132 1.0 ['ENSG00000119707|ENST00000261973|RBM25'] 111113 20647 TLELERLMP True PC9_epitope_Rep5 1100.58998104488 1100.5888899358602 84.473 2 -1.2611727000506807 0.37309548071846876 1.0 ['ENSG00000205089|ENST00000378731|CCNI2', 'nc|ENSG00000205089|Q6ZMN8-3|CCNI2', 'nc|ENSG00000205089|Q6ZMN8-2|CCNI2'] 104108 18971 SRWNLSVDWK True H1975_Epitope_Rep1 1289.6516697846498 1289.6500349037901 79.099 3 -1.261200210256052 0.37310317733143444 1.0 ['ENSG00000144407|ENST00000272847|PTH2R', 'chr2:208360237-208428201|217|15.18|0.52|4.88|+|ENST00000617735|PTH2R,PTH2R'] 113469 25209 TQRIRKKRELR True PC9_epitope_Rep2 1482.9219118220196 1482.92080993586 102.63 2 -1.2612281888232764 0.37311087375541724 1.0 ['ENST00000324871.11_1_12:58164900-58164960:-|nuORF'] 115194 7029 TVASPRMDP True H1975_Epitope_Rep3 972.4698659122 972.46876993586 31.999 2 -1.2612379083685232 0.3731156395777068 1.0 ['ENST00000492406.5_1_3:112280909-112281080:+|nuORF'] 89965 2060 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 10.832 3 -1.2612622021349251 0.3731156395777068 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 12787 12985 DLIGCQRL True PC9_epitope_Rep1 916.4800366730799 916.47892993586 54.818 2 -1.2613130838823305 0.3731156395777068 1.0 ['ENSG00000112739|ENST00000337659|PRPF4B', 'ENST00000463634.6_1_6:4056876-4060847:+|nuORF'] 129740 21082 VTKKGSGS True PC9_epitope_Rep2 762.42356734278 762.42246993586 86.549 2 -1.2613377396019319 0.3731156395777068 1.0 ['ENST00000420610.1_1_Y:14088999-14090148:+|nuORF'] 93983 24596 RVPKPAEA True PC9_epitope_Rep4 866.4974009893799 866.49630993586 103.1 2 -1.2613850651083702 0.3731156395777068 1.0 ['FLOT1|p.R284P|1|0.21|ENSG00000137312|chr6:30730973-30730973|C/G|missense_variant'] 25736 5377 FFLLIIRKLL True PC9_epitope_Rep3 1274.8478504100597 1274.84674993586 25.756 2 -1.2613855064290374 0.3731156395777068 1.0 ['nc|ENSG00000068878|Q14997-3|PSME4'] 49351 15239 KIFPVPEEP True PC9_epitope_Rep2 1054.5698972233 1054.5688099358601 63.886 2 -1.2613865576915562 0.3731156395777068 1.0 ['ENSG00000214717|ENST00000652001|ZBED1'] 13588 3380 DPRCLTRYY True H1975_Epitope_Rep2 1185.5600778989299 1185.55843490379 17.745 3 -1.2615099613314917 0.37313561090583225 1.0 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.R1708Afs*23|1|0.17|ENSG00000185010|chrX:154928668-154928668|G/-|frameshift_variant', 'F8|p.E1756Nfs*16|1|0.1|ENSG00000185010|chrX:154906527-154906527|C/-|frameshift_variant', 'F8|p.T1468Kfs*91|1|0.69|ENSG00000185010|chrX:154929363-154929387|CTTTGATCACCAGTCATCTCCAAGG/-|frameshift_variant', 'F8|p.E1053Kfs*2|1|0.57|ENSG00000185010|chrX:154930632-154930633|TC/-|frameshift_variant'] 105441 8207 SVAPSLKDL True PC9_epitope_Rep2 928.52294703088 928.52184993586 36.927 2 -1.261704403644515 0.37321696005499494 1.0 ['SZT2|p.G1171V|1|0.21|ENSG00000198198|chr1:43427359-43427359|G/T|missense_variant'] 15367 9626 EALKDGEERQK True NCI_RA007_Epitope_Rep1 1301.6575430107298 1301.65644993586 41.442 2 -1.2617115674227328 0.3732246541374612 1.0 ['nc|ENSG00000140386|Q9BY12-3|SCAPER', 'ENSG00000140386|ENST00000563290|SCAPER', 'ENST00000303521.10_1_15:76673691-77134263:-|nuORF'] 65404 11870 LSESC[Carbamidomethyl]VLGLV True PC9_epitope_Rep4 1075.55834684286 1075.55724993586 53.433 2 -1.2617922260977847 0.37324004173571473 1.0 ['ENST00000479638.5_1_6:160210956-160211809:+|nuORF'] 36127 3986 GVEQRWETMP True PC9_epitope_Rep3 1231.56555720219 1231.5639149037902 20.442 3 -1.2618259566517405 0.37324004173571473 1.0 ['ENST00000594286.5_1_19:53625810-53636169:-|nuORF'] 84407 8077 QGEVTVASIDD True PC9_epitope_Rep5 1132.52479750568 1132.52370993586 36.006 2 -1.262018107601612 0.373299945991064 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 11121 22403 DEEELEEDL True NCI_RA007_Epitope_Rep1 1119.44554412547 1119.44497496793 91.795 1 -1.2620223474838295 0.373299945991064 1.0 ['ENSG00000130477|ENST00000519716|UNC13A'] 63408 11445 LPGIHVSA True PC9_epitope_Rep3 792.4493881678 792.44828993586 49.022 2 -1.262029919499474 0.373299945991064 1.0 ['nc|ENSG00000090924|Q9H7P9-3|PLEKHG2', 'ENSG00000090924|ENST00000425673|PLEKHG2'] 64479 13190 LQVGVEFEAST True H1975_Epitope_Rep3 1178.5819184589798 1178.5813749679298 55.987 1 -1.262070337877995 0.3733076384882593 1.0 ['nc|ENSG00000130204|O96008-2|TOMM40', 'ENSG00000130204|ENST00000426677|TOMM40'] 49536 14110 KKGGGGGP True H1975_Epitope_Rep3 656.3605731634 656.36002496793 59.603 1 -1.2620849294801753 0.3733153307966123 1.0 ['ENSG00000150594|ENST00000280155|ADRA2A'] 101287 11090 SLWTTISNQ True NCI_RA007_Epitope_Rep1 1048.5189242796 1048.5178299358602 47.136 2 -1.2621100552657871 0.3733230229161297 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 118417 9596 VDNAPDQQNSH True H1975_Epitope_Rep2 1223.51669243347 1223.5155899358601 41.886 2 -1.2621477780030153 0.3733307148468185 1.0 ['ENSG00000174469|ENST00000361727|CNTNAP2'] 90245 9384 RHPREAGPNPS True NCI_RA007_Epitope_Rep5 1216.60611657456 1216.6050099358602 42.735 2 -1.2621838867580486 0.37334609814173847 1.0 ['ENSG00000137776|ENST00000380516|SLTM', 'nc|ENSG00000137776|Q9NWH9-3|SLTM', 'ENST00000558052.1_1_15:59175823-59179549:-|nuORF'] 127873 23682 VRPAIPGGG True PC9_epitope_Rep6 822.4711862415398 822.47008993586 104.26 2 -1.2622179792167758 0.37334609814173847 1.0 ['ENST00000374910.3_1_X:57146877-57147708:-|nuORF'] 12521 16033 DLAKLRKVP True PC9_epitope_Rep6 1038.6549642599398 1038.65386993586 73.995 2 -1.2622517456163815 0.37336148068142766 1.0 ['ENSG00000011007|ENST00000613537|ELOA', 'nc|ENSG00000011007|Q14241-1|ELOA'] 75100 1353 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 7.4874 3 -1.2623553388838205 0.37336148068142766 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 95962 4169 SEAAQLLEA True H1975_Epitope_Rep2 930.4658260775799 930.46472993586 21.139 2 -1.2623951801789153 0.3733691716680781 1.0 ['ENST00000494993.1_1_15:91475575-91475770:-|nuORF', 'nc|ENSG00000184508|Q8N4P3-2|HDDC3', 'ENSG00000184508|ENST00000394272|HDDC3'] 54694 21075 LAEEPEAVL True PC9_epitope_Rep1 969.5018772331298 969.50132496793 85.897 1 -1.2624490684609782 0.3733845530750255 1.0 ['ENSG00000169710|ENST00000306749|FASN'] 93661 6173 RTFWYWNYNYY True H1975_Epitope_Rep3 1674.7255630008997 1674.72391490379 28.755 3 -1.262454586017545 0.3733845530750255 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 84178 4412 QESLTFIDK True H1975_Epitope_Rep3 1079.5498900547097 1079.5487899358602 22.093 2 -1.2625502045236516 0.37340451644575356 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD', 'nc|ENSG00000198947|P11532-3|DMD', 'nc|ENSG00000198947|P11532-2|DMD'] 289 18149 AAHGPDSF True NCI_RA007_Epitope_Rep4 800.34531702208 800.34420993586 78.542 2 -1.2627659179272939 0.37344459442876426 1.0 ['ENSG00000143156|ENST00000367811|NME7', 'nc|ENSG00000143156|Q9Y5B8-2|NME7', 'ENST00000524967.5_1_1:169256457-169336948:-|nuORF'] 45660 21225 ISIRWFFKNQS True H1975_Epitope_Rep3 1424.75646920636 1424.75536993586 88.648 2 -1.2628528626096198 0.37344459442876426 1.0 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'nc|ENSG00000079385|P13688-2|CEACAM1', 'ENST00000485605.1_1_19:43015056-43023397:-|nuORF', 'ENST00000377806.7_1_19:43023094-43032607:-|nuORF'] 46514 14182 ITPTDPIDR True H1975_Epitope_Rep1 1026.53457434374 1026.53346993586 59.726 2 -1.2628742195562466 0.37344459442876426 1.0 ['nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB'] 65497 6144 LSFRARAL True PC9_epitope_Rep2 932.5555845718399 932.55448993586 29.026 2 -1.2629472829692137 0.37344459442876426 1.0 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'ENST00000469059.1_1_10:32634533-32635843:-|nuORF', 'ENST00000480402.1_1_10:32634460-32635843:-|nuORF', 'ENSG00000135999|ENST00000258484|EPC2'] 52574 25027 KPVQGGGL True PC9_epitope_Rep5 754.4337381036598 754.4331849679301 101.41 1 -1.2629707762639477 0.37344459442876426 1.0 ['NCOA1|p.L960P|1|0.2|ENSG00000084676|chr2:24728469-24728469|T/C|missense_variant'] 123861 18571 VKAGITIP True PC9_epitope_Rep6 797.50108938749 797.5005449679301 84.073 1 -1.2629736099402415 0.37344459442876426 1.0 ['ENSG00000112115|ENST00000648244|IL17A'] 140406 16826 YYFCRWYRNRK True NCI_RA007_Epitope_Rep1 1653.7986854548496 1653.79758993586 69.579 2 -1.2629861339978938 0.37344459442876426 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 78775 7715 PEKEPYKSKYS True H1975_Epitope_Rep3 1354.6768814729799 1354.6757899358602 34.659 2 -1.2630262013448956 0.37344459442876426 1.0 ['ENSG00000198954|ENST00000361983|KIFBP'] 10327 14238 CHVIAAPS True NCI_RA007_Epitope_Rep5 796.39015903952 796.38906993586 61.458 2 -1.2630362714641867 0.37344459442876426 1.0 ['ENSG00000136937|ENST00000375147|NCBP1', 'ENST00000478100.3_1_9:100403935-100409818:+|nuORF'] 62296 5101 LLQPPHLQAM True NCI_RA007_Epitope_Rep1 1146.6219498795 1146.6208499358602 23.928 2 -1.2630403204673313 0.37344459442876426 1.0 ['ENSG00000105063|ENST00000412770|PPP6R1', 'PPP6R1|p.L361Afs*10|1|0.17|ENSG00000105063|chr19:55241320-55241321|-/T|frameshift_variant'] 61014 9553 LLANRLFDH True H1975_Epitope_Rep1 1097.5981776598098 1097.5970899358601 41.67 2 -1.263097852262473 0.3734462236947052 1.0 ['nc|ENSG00000099139|Q92824|PCSK5', 'ENSG00000099139|ENST00000674117|PCSK5', 'nc|ENSG00000099139|Q92824-2|PCSK5', 'PCSK5|p.C1375Wfs*51|1|0.3|ENSG00000099139|chr9:76323152-76323155|CTGT/-|frameshift_variant'] 61516 11928 LLGAERGL True PC9_epitope_Rep1 827.4865019525099 827.48540993586 50.746 2 -1.2631318499745137 0.3734462236947052 1.0 ['ENST00000573525.1_1_16:2962029-2979726:+|nuORF'] 40527 4619 HSPCWKEKCP True NCI_RA007_Epitope_Rep4 1213.53723427937 1213.53559490379 24.182 3 -1.2631401163761373 0.3734462236947052 1.0 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 125302 20588 VLRSWWPRWWW True NCI_RA007_Epitope_Rep1 1656.8466216234397 1656.8449649037902 84.307 3 -1.26314030330494 0.3734462236947052 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 121667 9268 VGLKGATL True H1975_Epitope_Rep2 757.46978925921 757.46868993586 40.605 2 -1.2631543956839002 0.3734462236947052 1.0 ['ENSG00000066739|ENST00000359933|ATG2B'] 44348 14125 IMLIFLGH True NCI_RA007_Epitope_Rep4 942.5360949972201 942.53498993586 61.613 2 -1.2631838526882797 0.37345243499920244 1.0 ['nc|ENSG00000162706|Q8N126-3|CADM3', 'ENSG00000162706|ENST00000368125|CADM3', 'nc|ENSG00000162706|Q8N126-2|CADM3'] 95878 8572 SDQLVDVLLEE True H1975_Epitope_Rep1 1258.62926257422 1258.6281699358601 37.899 2 -1.2632738129768672 0.37345243499920244 1.0 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'nc|ENSG00000102904|Q2TAA8-2|TSNAXIP1', 'ENST00000466164.5_1_16:67859786-67861893:+|nuORF', 'ENST00000568990.5_1_16:67859786-67861893:+|nuORF', 'ENST00000569504.5_1_16:67859786-67861483:+|nuORF'] 101232 17650 SLWDRWSLP True PC9_epitope_Rep1 1158.5821932425 1158.58054490379 72.683 3 -1.2632934257958162 0.37345243499920244 1.0 ['ENST00000454175.1_1_7:99103105-99103198:+|nuORF'] 26867 21115 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 88.239 2 -1.263296738398943 0.37345243499920244 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 118793 5412 VEEDFKPAP True H1975_Epitope_Rep3 1030.4971262058598 1030.4960299358602 25.879 2 -1.2633718617107343 0.37350003680891264 1.0 ['nc|ENSG00000133641|Q8N999-3|RLIG1', 'ENST00000552803.5_1_12:88429407-88437530:+|nuORF', 'ENST00000548511.5_1_12:88429578-88437530:+|nuORF', 'ENST00000552847.5_1_12:88429328-88439561:+|nuORF', 'ENST00000552121.5_1_12:88429328-88442196:+|nuORF', 'ENST00000547468.1_1_12:88436564-88442196:+|nuORF', 'ENSG00000133641|ENST00000356891|C12orf29', 'ENST00000550333.5_1_12:88429286-88442196:+|nuORF'] 18566 7848 EKVWNHRWRE True NCI_RA007_Epitope_Rep1 1438.7218150331398 1438.7207099358602 34.517 2 -1.2633999040487687 0.37350003680891264 1.0 ['ENST00000564353.5_1_15:74890891-74891065:+|nuORF'] 72432 7205 MTISCSVSP True PC9_epitope_Rep1 923.40923980159 923.40814993586 32.529 2 -1.2634050255998104 0.37350003680891264 1.0 ['nc|ENSG00000152128|Q8TC26-2|TMEM163'] 129321 4625 VTDSKEKEK True NCI_RA007_Epitope_Rep4 1062.55570371114 1062.55460993586 24.205 2 -1.2634453446518497 0.3735031409501374 1.0 ['nc|ENSG00000106635|Q9BQE9-4|BCL7B', 'ENST00000493592.1_1_7:72954140-72971423:-|nuORF', 'nc|ENSG00000106635|Q9BQE9-3|BCL7B', 'ENST00000463858.5_1_7:72951630-72971540:-|nuORF', 'ENSG00000106635|ENST00000223368|BCL7B', 'ENST00000482231.5_1_7:72951630-72971576:-|nuORF'] 90392 21892 RILHVRNAPS True NCI_RA007_Epitope_Rep5 1161.67307393557 1161.67141490379 91.334 3 -1.2634728544184333 0.3735031409501374 1.0 ['ENSG00000087299|ENST00000267436|L2HGDH'] 3794 10151 AGVGPEPERL True PC9_epitope_Rep5 1023.53490869691 1023.53380993586 44.032 2 -1.2634832550721742 0.3735108275565916 1.0 ['ENST00000360612.4_1_22:50357538-50357607:+|nuORF'] 108418 5220 TEEEKERIY True H1975_Epitope_Rep2 1195.5720820512697 1195.57098993586 25.146 2 -1.26350157784152 0.3735139313187824 1.0 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'nc|ENSG00000157106|Q96Q15-4|SMG1'] 104001 16961 SRRVPGTP True NCI_RA007_Epitope_Rep5 868.4878989348399 868.48680993586 72.0 2 -1.2635023649032664 0.3735139313187824 1.0 ['ENST00000361256.9_1_9:131585006-131586171:-|nuORF'] 78128 9604 PAPDWDAL True H1975_Epitope_Rep1 883.4075829254699 883.40703496793 41.867 1 -1.2636476638603673 0.3735201383862301 1.0 ['nc|ENSG00000284730|P0DPE3|TMDD1'] 81837 6298 PSGSYRASVL True PC9_epitope_Rep4 1035.53490869691 1035.53380993586 31.286 2 -1.2636831686353311 0.3735201383862301 1.0 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'ENST00000473815.1_1_2:238601140-238644255:+|nuORF'] 59251 12129 LGGPNPGSRGL True PC9_epitope_Rep2 1023.5461420869499 1023.54504993586 51.964 2 -1.2637000660352822 0.3735201383862301 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 73674 23488 NGNGHEHC True PC9_epitope_Rep4 866.3089485967 866.30784993586 98.649 2 -1.2637329037728682 0.3735201383862301 1.0 ['NMT1-NME1|1|fusion', 'ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'NMT1|p.L84Ffs*50|1|0.27|ENSG00000136448|chr17:45086515-45086516|-/TT|frameshift_variant', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 122945 9839 VGVYAAGA True NCI_RA007_Epitope_Rep5 706.3649898374998 706.36444496793 44.491 1 -1.2637906422226726 0.37353861252530207 1.0 ['ENSG00000173227|ENST00000527043|SYT12'] 123659 13442 VIMIILMI True PC9_epitope_Rep3 944.58026830832 944.57916993586 56.751 2 -1.2638087002900007 0.37353861252530207 1.0 ['nc|ENSG00000291104|Q96KV6|BTN2A3P', 'ENST00000463944.1_1_6:26426426-26428241:+|nuORF'] 108663 8101 TELESPKCKR True H1975_Epitope_Rep1 1189.6125073946098 1189.6114099358601 36.106 2 -1.2638372893186023 0.37353861252530207 1.0 ['nc|ENSG00000157992|Q53RY4-2|KRTCAP3', 'ENSG00000157992|ENST00000288873|KRTCAP3'] 110064 7567 TIACIFFPL True PC9_epitope_Rep1 1023.54632532775 1023.54522993586 33.924 2 -1.2638555939110798 0.37353861252530207 1.0 ['ENST00000520096.5_1_8:94359025-94433012:-|nuORF'] 10329 10591 CIAMLVEQL True PC9_epitope_Rep4 1018.51912460374 1018.51802993586 48.48 2 -1.2639436823727057 0.3735785173644761 1.0 ['nc|ENSG00000114654|Q9HA90|EFCC1', 'ENSG00000114654|ENST00000683648|EFCC1', 'nc|ENSG00000114654|Q9HA90-2|EFCC1', 'ENST00000481536.2_1_3:128749483-128758688:+|nuORF'] 81921 4311 PSNQVVVQT True NCI_RA007_Epitope_Rep3 970.5083595958998 970.50726993586 23.695 2 -1.2641002799110574 0.3735785173644761 1.0 ['ENSG00000123268|ENST00000262053|ATF1', 'nc|ENSG00000123268|P18846-2|ATF1'] 78162 6426 PAPPPKENA True H1975_Epitope_Rep3 919.47633119163 919.4752299358599 29.694 2 -1.2641562155333022 0.3735984690497804 1.0 ['ENST00000432132.2_1_9:98909238-98910135:+|nuORF', 'ENST00000432307.1_1_X:110862947-110863739:-|nuORF', 'nc|ENSG00000063046|P23588-2|EIF4B', 'ENSG00000063046|ENST00000262056|EIF4B'] 100320 14825 SLMGTVMAKR True PC9_epitope_Rep1 1092.57837081536 1092.5772699358602 61.846 2 -1.2642010829067354 0.3736261040235525 1.0 ['NOS3|p.V1069Cfs*24|1|0.24|ENSG00000164867|chr7:151013326-151013326|G/-|frameshift_variant', 'ENSG00000164867|ENST00000297494|NOS3', 'nc|ENSG00000164867|P29474-3|NOS3', 'nc|ENSG00000164867|P29474-2|NOS3'] 57881 9799 LEQFRVAHED True NCI_RA007_Epitope_Rep4 1242.59929985862 1242.59820993586 44.54 2 -1.2642029708273075 0.3736261040235525 1.0 ['ENSG00000164610|ENST00000297157|RP9'] 4546 16691 AKSKNTLKWHR True H1975_Epitope_Rep3 1367.77860163327 1367.77750993586 69.723 2 -1.2642185294342998 0.3736337876130077 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 37479 10504 GYDGNWFVGR True PC9_epitope_Rep5 1169.52540664237 1169.5243099358602 45.39 2 -1.2643939975629226 0.37369822013419524 1.0 ['nc|ENSG00000177707|Q9NQS3-2|NECTIN3', 'nc|ENSG00000177707|Q9NQS3-3|NECTIN3', 'ENSG00000177707|ENST00000485303|NECTIN3', 'NECTIN3|p.T274I|1|0.07|ENSG00000177707|chr3:111122142-111122142|C/T|missense_variant'] 35332 16461 GSVRFRWYQGF True H1975_Epitope_Rep1 1401.6942033029698 1401.69310993586 68.682 2 -1.264395090877457 0.37369822013419524 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 59726 10156 LGVGLKTL True PC9_epitope_Rep2 799.5167394516301 799.51564993586 44.402 2 -1.2644270100998452 0.3737059025563024 1.0 ['ENST00000316509.10_2_17:8062906-8063221:-|nuORF'] 29928 25610 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 106.05 3 -1.2645223283273601 0.3737457988862449 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 135088 16421 YALQRIQE True PC9_epitope_Rep1 1019.5399940773499 1019.53888993586 67.987 2 -1.2645243950340732 0.3737457988862449 1.0 ['ENST00000562938.5_1_15:78207528-78213944:-|nuORF'] 47066 7925 IVTSSLLG True PC9_epitope_Rep1 788.4643695256 788.46326993586 35.307 2 -1.2645696968779554 0.37375509002600205 1.0 ['ENST00000590402.1_1_17:66422197-66423441:-|nuORF'] 34051 5881 GNQLIPQPL True NCI_RA007_Epitope_Rep5 978.5498304850598 978.54872993586 29.308 2 -1.2645714432101762 0.37375509002600205 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000519559.1_1_8:52732913-52752014:-|nuORF', 'nc|ENSG00000168300|Q96MG8-2|PCMTD1'] 123046 10229 VGYQVPEAE True NCI_RA007_Epitope_Rep3 990.4658260775798 990.4652749679301 47.314 1 -1.2646025594627377 0.37375509002600205 1.0 ['ENST00000588723.5_1_19:37606065-37660830:-|nuORF', 'nc|ENSG00000196967|Q6P3V2-2|ZNF585A', 'ENSG00000196967|ENST00000292841|ZNF585A'] 18521 8727 EKQRHWLEPNK True H1975_Epitope_Rep1 1463.7633454919498 1463.7622499358602 38.497 2 -1.26463883927793 0.37375509002600205 1.0 ['nc|ENSG00000172159|A2A2Y4-5|FRMD3', 'nc|ENSG00000172159|A2A2Y4-2|FRMD3', 'ENSG00000172159|ENST00000304195|FRMD3'] 120362 14552 VFRHAQDL True PC9_epitope_Rep1 984.5141136826799 984.5130099358599 60.798 2 -1.2646535562991479 0.37375509002600205 1.0 ['ENSG00000168490|ENST00000454243|PHYHIP'] 27907 20443 FQLIHEEL True PC9_epitope_Rep1 1027.53384606775 1027.5332749679299 83.447 1 -1.2646652294403848 0.37375509002600205 1.0 ['ENST00000522166.1_1_8:57125296-57125371:+|nuORF'] 41610 13812 IDFWKMWQEQR True PC9_epitope_Rep1 1565.74491854649 1565.74382993586 57.971 2 -1.2647231933317569 0.37377503587504446 1.0 ['ENST00000370574.3_2_1:86171783-86171934:-|nuORF'] 102780 8996 SQEMNTLFRFW True PC9_epitope_Rep5 1457.6761702803296 1457.6750699358602 39.548 2 -1.2648109322741887 0.37377974000490555 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 80782 22485 PLSQKQRLF True PC9_epitope_Rep1 1115.6451278522297 1115.64402993586 91.288 2 -1.2649088943591638 0.37377974000490555 1.0 ['PLXNA4|p.S39L|1|0.72|ENSG00000221866|chr7:132508578-132508578|G/A|missense_variant'] 130979 26712 VVKIGLGVL True NCI_RA007_Epitope_Rep1 896.6058888091999 896.60478993586 110.69 2 -1.2649389322032927 0.37377974000490555 1.0 ['ENSG00000167355|ENST00000300773|OR51B5'] 86764 20573 QRLQAQGIQVF True PC9_epitope_Rep6 1286.70951901394 1286.70842993586 91.863 2 -1.2649663496857602 0.37377974000490555 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'nc|ENSG00000113971|Q7Z494-3|NPHP3', 'nc|ENSG00000113971|Q7Z494-6|NPHP3', 'nc|ENSG00000113971|Q7Z494-5|NPHP3'] 127666 7030 VREWYRFHYIN True PC9_epitope_Rep1 1581.78408093653 1581.78244490379 31.847 3 -1.265138724845902 0.37377974000490555 1.0 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 119168 12851 VEKEREAYRRR True PC9_epitope_Rep5 1490.8066072862598 1490.80495490379 54.441 3 -1.2651415407670719 0.37377974000490555 1.0 ['ENSG00000164366|ENST00000296824|CCDC127'] 125300 19900 VLRSWWPRWWW True H1975_Epitope_Rep3 1656.8466216234397 1656.8449649037902 83.303 3 -1.2651594693970472 0.37377974000490555 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 49092 10278 KFYMWFYFFIK True NCI_RA007_Epitope_Rep2 1618.8046652687397 1618.8035699358602 44.569 2 -1.2651662752931772 0.3737874198256092 1.0 ['ENST00000498257.5_1_6:129811877-129812174:+|nuORF'] 45899 4959 ISREQMILWD True PC9_epitope_Rep5 1289.6438075228898 1289.64217490379 24.11 3 -1.2652054012990392 0.3738196266954453 1.0 ['nc|ENSG00000152270|Q13370-2|PDE3B', 'ENSG00000152270|ENST00000282096|PDE3B', 'ENST00000534317.1_1_11:14665864-14793584:+|nuORF'] 13382 24181 DNGNTNAN True H1975_Epitope_Rep2 818.3154734457801 818.3149249679301 99.545 1 -1.265283093727039 0.3738395693069914 1.0 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B'] 118442 7137 VDPVGNNY True NCI_RA007_Epitope_Rep5 876.39774651776 876.39664993586 34.129 2 -1.2652986834706594 0.37384724811144904 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant', 'USH2A|p.V2397Cfs*16|1|0.31|ENSG00000042781|chr1:215934727-215934727|C/-|frameshift_variant'] 38076 7413 HENCKHTRL True PC9_epitope_Rep4 1136.5509101975601 1136.5492649037901 35.862 3 -1.265361610263117 0.3738535484820246 1.0 ['ENST00000433921.5_1_2:219503064-219516433:-|nuORF', 'nc|ENSG00000115568|P52746|ZNF142', 'ENSG00000115568|ENST00000411696|ZNF142'] 105189 7315 STNYFKSTLVH True NCI_RA007_Epitope_Rep2 1295.6510010783102 1295.64990993586 33.075 2 -1.2654849407658357 0.3738535484820246 1.0 ['ENST00000511691.1_1_5:138994522-139002983:+|nuORF'] 7989 5973 ATDNVLFTPR True NCI_RA007_Epitope_Rep3 1132.58767254576 1132.58602490379 30.477 3 -1.2655149430745445 0.3738535484820246 1.0 ['ENSG00000136243|ENST00000258742|NUP42', 'nc|ENSG00000136243|O15504-3|NUP42', 'ENST00000438012.1_7:23236834-23240361:+|nuORF', 'ENST00000489145.1_7:23239055-23240361:+|nuORF'] 93514 11934 RSLQEMFSGTR True NCI_RA007_Epitope_Rep5 1310.6401191247799 1310.6390299358602 52.56 2 -1.265525828433406 0.3738535484820246 1.0 ['ENST00000593183.2_1_19:16013215-16014022:-|nuORF'] 67020 11940 LTANFIAPKRP True NCI_RA007_Epitope_Rep1 1226.7135417652198 1226.7124499358601 50.429 2 -1.2656202799511576 0.3738535484820246 1.0 ['ENST00000338008.9_1_5:79732623-79732692:+|nuORF'] 107731 3656 TALQAPAVPP True H1975_Epitope_Rep2 963.5389314481898 963.53782993586 19.016 2 -1.2656847734663867 0.3738535484820246 1.0 ['ENSG00000112290|ENST00000392589|WASF1'] 67467 4696 LTEFLQDP True NCI_RA007_Epitope_Rep2 961.4756624852898 961.47456993586 22.892 2 -1.2657051543022841 0.3738535484820246 1.0 ['ENSG00000128242|ENST00000406361|GAL3ST1'] 68340 13872 LTSDNVIR True PC9_epitope_Rep3 916.4977949122 916.49668993586 58.441 2 -1.265712270353141 0.3738535484820246 1.0 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 64145 14548 LQEREKQL True PC9_epitope_Rep3 1042.5771078620598 1042.5760099358602 61.082 2 -1.2657580303533325 0.3738535484820246 1.0 ['nc|ENSG00000106443|O94880-2|PHF14', 'ENST00000490957.5_1_7:11013950-11101713:+|nuORF', 'nc|ENSG00000106443|O94880-1|PHF14', 'ENSG00000106443|ENST00000634607|PHF14', 'ENST00000497851.1_1_7:11075344-11076425:+|nuORF'] 45925 11697 ISRWFEVERRE True NCI_RA007_Epitope_Rep1 1505.77391017565 1505.77280993586 49.473 2 -1.2657609203166253 0.3738535484820246 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 127676 24771 VRFNPHTY True H1975_Epitope_Rep1 1032.5141136826799 1032.51300993586 102.6 2 -1.2657748839839755 0.3738535484820246 1.0 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'GPHN-DCAF5|1|fusion'] 107939 4364 TAWYWYQNRHI True NCI_RA007_Epitope_Rep5 1536.7262317072398 1536.7245749037902 23.4 3 -1.2657988367160946 0.3738535484820246 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|123|2|sense'] 34247 17662 GPKKTKRE True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 74.72 2 -1.2658563941488183 0.3738628282778745 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 6051 7679 APLYKRLA True H1975_Epitope_Rep1 930.5650866263799 930.56398993586 34.503 2 -1.265873234840011 0.3738628282778745 1.0 ['TET3|p.G1454Afs*77|1|0.36|ENSG00000187605|chr2:74101148-74101148|G/-|frameshift_variant', 'nc|ENSG00000187605|O43151-2|TET3', 'ENSG00000187605|ENST00000409262|TET3'] 9585 7808 AYDPYLIAMS True PC9_epitope_Rep2 1142.53179746242 1142.5307099358602 35.403 2 -1.265933826133812 0.3738628282778745 1.0 ['ENSG00000262919|ENST00000576892|CCNQ', 'nc|ENSG00000262919|Q8N1B3-2|CCNQ'] 16478 15603 EELVHDLVSAL True NCI_RA007_Epitope_Rep1 1223.6397676882698 1223.6386699358602 64.781 2 -1.265944312179274 0.3738628282778745 1.0 ['GPATCH2|p.D113Ifs*10|1|0.24|ENSG00000092978|chr1:217620220-217620220|T/-|frameshift_variant', 'nc|ENSG00000092978|Q9NW75-2|GPATCH2', 'ENSG00000092978|ENST00000366935|GPATCH2'] 127077 21329 VPYVTPHP True PC9_epitope_Rep2 908.4756029156399 908.4745099358599 87.506 2 -1.2659471265335942 0.3738628282778745 1.0 ['ENSG00000165124|ENST00000374469|SVEP1', 'nc|ENSG00000165124|Q4LDE5-3|SVEP1'] 90002 14819 RGCRERED True PC9_epitope_Rep6 1019.4566754595498 1019.45556993586 68.972 2 -1.2659747492360691 0.3738628282778745 1.0 ['ENST00000458479.1_1_21:34100518-34100596:+|nuORF'] 57913 16406 LEQLERIGL True PC9_epitope_Rep2 1069.6131590176099 1069.61206993586 68.349 2 -1.2660215700816673 0.3738705050083984 1.0 ['ENSG00000108651|ENST00000261708|UTP6', 'ENST00000583408.5_1_17:30207568-30228646:-|nuORF', 'ENST00000579878.1_1_17:30219240-30228646:-|nuORF'] 69386 8580 LVQIPIFFFTV True NCI_RA007_Epitope_Rep2 1322.7638460025798 1322.76274993586 38.018 2 -1.2660898482329213 0.37387818155068414 1.0 ['ENSG00000172209|ENST00000304402|GPR22'] 25700 5901 FFGCFTEKHI True PC9_epitope_Rep1 1227.57466533391 1227.57301490379 27.514 3 -1.2661566206538022 0.37389513430018023 1.0 ['ENSG00000247746|ENST00000500968|USP51'] 78549 7248 PDNEAVEQHR True H1975_Epitope_Rep1 1193.5425132584899 1193.5414099358602 32.889 2 -1.2661580220408546 0.37389513430018023 1.0 ['ENST00000541602.5_1_11:113934022-114057819:+|nuORF', 'nc|ENSG00000109906|Q05516-2|ZBTB16', 'ZBTB16|p.K497Sfs*121|1|0.48|ENSG00000109906|chr11:114242199-114242199|G/-|frameshift_variant', 'ENSG00000109906|ENST00000335953|ZBTB16'] 69124 18765 LVLGKKVG True PC9_epitope_Rep3 812.5483739330799 812.54726993586 77.4 2 -1.2661656565237238 0.37389513430018023 1.0 ['ENST00000237172.11_1_6:76203241-76203376:-|nuORF'] 18621 11597 ELALFFKGPGP True PC9_epitope_Rep4 1174.6386454894598 1174.63754993586 52.367 2 -1.2661800612571021 0.37389513430018023 1.0 ['ENST00000271332.3_1_1:109817722-109817794:+|nuORF'] 53187 8589 KSVPPKPA True NCI_RA007_Epitope_Rep4 822.49633836022 822.49524993586 39.821 2 -1.2661998374356638 0.37389513430018023 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 59540 20646 LGQNLQPEA True PC9_epitope_Rep5 968.4927095317598 968.49160993586 84.468 2 -1.2662307835650208 0.37389513430018023 1.0 ['COL20A1|p.A273E|1|0.38|ENSG00000101203|chr20:63308584-63308584|C/A|missense_variant'] 134549 25679 WVLSLALK True NCI_RA007_Epitope_Rep5 928.57458868092 928.57404496793 106.31 1 -1.2662864725254654 0.37389513430018023 1.0 ['ENSG00000074755|ENST00000381638|ZZEF1', 'nc|ENSG00000074755|O43149-2|ZZEF1'] 75102 1782 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 9.8586 3 -1.2663186433765299 0.3739013178057003 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 127813 15079 VRLIHLRLK True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 63.153 3 -1.2663194887219966 0.3739013178057003 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 34659 11495 GQLAETVFGTV True PC9_epitope_Rep5 1120.57643915572 1120.57534993586 49.212 2 -1.2663208050779158 0.3739013178057003 1.0 ['ENSG00000132793|ENST00000373257|LPIN3', 'nc|ENSG00000132793|Q9BQK8-2|LPIN3'] 361 15357 AALAALALA True NCI_RA007_Epitope_Rep5 783.48543932335 783.48434993586 65.777 2 -1.2663255424516178 0.3739013178057003 1.0 ['nc|ENSG00000170801|P83110-2|HTRA3', 'ENSG00000170801|ENST00000307358|HTRA3', 'ENSG00000267221|ENST00000587304|C17orf113'] 97024 4715 SEVSQLNHIA True H1975_Epitope_Rep2 1096.55128703704 1096.55018993586 23.227 2 -1.2663408698315586 0.37390440933106145 1.0 ['nc|ENSG00000034677|Q9NV58-3|RNF19A', 'ENSG00000034677|ENST00000341084|RNF19A', 'RNF19A|p.E797K|2|0.06|ENSG00000034677|chr8:100258684-100258684|C/T|missense_variant'] 129881 23381 VTLRQLRN True PC9_epitope_Rep2 998.59851201298 998.59740993586 95.41 2 -1.2663478369525158 0.37390440933106145 1.0 ['ENSG00000182220|ENST00000636580|ATP6AP2', 'nc|ENSG00000182220|O75787-2|ATP6AP2'] 6506 12631 APTPLRPGF True PC9_epitope_Rep5 954.5287011176599 954.52760993586 53.588 2 -1.2663777345191176 0.37390750070483825 1.0 ['ENSG00000177303|ENST00000321617|CASKIN2', 'GRB2-CASKIN2|1|fusion', 'nc|ENSG00000177303|Q8WXE0-2|CASKIN2'] 73355 10609 NEPHRIQQ True H1975_Epitope_Rep2 1020.5100909314001 1020.50898993586 45.83 2 -1.266398903335096 0.37390750070483825 1.0 ['nc|ENSG00000147099|Q9BY41-4|HDAC8', 'ENSG00000147099|ENST00000373573|HDAC8', 'ENST00000470998.1_1_X:71550718-71682242:-|nuORF'] 64992 16556 LSDFRRRRSFR True H1975_Epitope_Rep1 1494.8280114371798 1494.8269099358602 69.057 2 -1.2664287810196304 0.3739274331944104 1.0 ['ENSG00000171522|ENST00000302472|PTGER4', 'ENST00000513635.1_1_5:40681836-40685490:+|nuORF'] 103877 14279 SRLETEIERC True PC9_epitope_Rep4 1234.59758560646 1234.59648993586 62.826 2 -1.2664910497954598 0.3739305238900738 1.0 ['ENSG00000165914|ENST00000328459|TTC7B', 'nc|ENSG00000165914|Q86TV6-2|TTC7B'] 129932 12399 VTMLDNFPTN True PC9_epitope_Rep5 1150.53286009158 1150.5317699358602 52.689 2 -1.2665339635784398 0.3739305238900738 1.0 ['ENST00000546621.5_1_12:56668606-56679804:-|nuORF', 'ENSG00000062485|ENST00000351328|CS', 'ENST00000547912.1_1_12:56676173-56676410:-|nuORF', 'ENST00000547449.1_1_12:56676173-56676733:-|nuORF'] 74908 23222 NLRWILTFA True PC9_epitope_Rep5 1132.6393141958 1132.63820993586 94.306 2 -1.266546675307426 0.3739458717395568 1.0 ['ENSG00000069431|ENST00000261200|ABCC9', 'nc|ENSG00000069431|O60706|ABCC9'] 134659 10234 WWLRRYQQQVR True NCI_RA007_Epitope_Rep2 1617.86406259273 1617.86296993586 44.399 2 -1.266570280759711 0.3739458717395568 1.0 ['ENSG00000173237|ENST00000683896|C11orf86'] 117203 9930 TYTFSLEGSG True PC9_epitope_Rep1 1060.47130538084 1060.47020993586 43.058 2 -1.266616437240102 0.3739612188365651 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 121080 18617 VGFYPVPGP True PC9_epitope_Rep1 931.4803539429098 931.47924993586 76.398 2 -1.26661937365625 0.3739612188365651 1.0 ['ENSG00000214513|ENST00000398468|NOTO'] 66792 5345 LSVKEDAK True NCI_RA007_Epitope_Rep4 888.4916469025999 888.49054993586 27.125 2 -1.266679842945979 0.3739719815171163 1.0 ['ENSG00000135549|ENST00000368452|PKIB', 'nc|ENSG00000135549|Q9C010-2|PKIB'] 84753 6732 QHHPPGPT True PC9_epitope_Rep3 869.41439964141 869.41330993586 30.918 2 -1.2666838109974685 0.3739719815171163 1.0 ['ENST00000538448.5_1_20:30689318-30689537:+|nuORF'] 110481 11775 TIPPDYRLE True NCI_RA007_Epitope_Rep5 1102.5658744720201 1102.56476993586 51.951 2 -1.2666852087577756 0.3739719815171163 1.0 ['nc|ENSG00000153113|P20810-3|CAST', 'nc|ENSG00000153113|P20810-4|CAST', 'nc|ENSG00000153113|P20810-8|CAST', 'nc|ENSG00000153113|P20810-2|CAST', 'nc|ENSG00000153113|P20810|CAST', 'nc|ENSG00000153113|P20810-9|CAST', 'nc|ENSG00000153113|P20810-5|CAST', 'nc|ENSG00000153113|P20810-10|CAST', 'nc|ENSG00000153113|P20810-7|CAST', 'ENSG00000153113|ENST00000675179|CAST', 'ENST00000513666.5_1_5:96073558-96090478:+|nuORF'] 92418 8548 RQRWFQLESSK True H1975_Epitope_Rep1 1463.7633454919498 1463.7622499358602 37.806 2 -1.2667080013408945 0.3739750707798654 1.0 ['ENST00000442074.1_1_7:78115917-78116193:+|nuORF'] 69099 20950 LVKKLAKK True NCI_RA007_Epitope_Rep5 926.6640723916598 926.66296993586 87.588 2 -1.2667293680054295 0.3739750707798654 1.0 ['ENSG00000198755|ENST00000322203|RPL10A', 'ENST00000464112.5_1_6:35436546-35438524:+|nuORF', 'ENST00000478340.2_1_6:35437033-35438524:+|nuORF', 'ENST00000472730.1_1_3:61728131-61728755:-|nuORF', 'ENST00000426688.1_1_1:81674334-81674790:+|nuORF'] 12854 7867 DLLEEFAPTP True NCI_RA007_Epitope_Rep2 1130.54955570154 1130.5484499358602 35.232 2 -1.266806688209764 0.37398583229159005 1.0 ['AAK1|p.A886P|1|0.31|ENSG00000115977|chr2:69478975-69478975|C/G|missense_variant'] 10529 15298 CPMLQNLA True NCI_RA007_Epitope_Rep4 888.41974491564 888.41864993586 66.496 2 -1.2668469529126918 0.37398583229159005 1.0 ['ENST00000218789.9_3_13:111957024-111957249:+|nuORF'] 65973 13039 LSLRQVSHPRR True NCI_RA007_Epitope_Rep2 1347.7847496428699 1347.78364993586 55.345 2 -1.2668717451507707 0.37398583229159005 1.0 ['ENST00000545054.6_1_14:24563583-24563937:+|nuORF'] 61667 18819 LLHPPPLSL True PC9_epitope_Rep3 985.59605240149 985.59494993586 77.611 2 -1.2669242601234056 0.37400576015687237 1.0 ['ENST00000583260.1_1_17:62009328-62009508:-|nuORF'] 57207 4647 LEEWCPHF True NCI_RA007_Epitope_Rep5 1059.4484021916298 1059.4473099358602 24.555 2 -1.266996712186974 0.3740532856197456 1.0 ['ENST00000476883.5_1_1:153925810-153930559:-|nuORF'] 115752 12176 TVLPMKKD True PC9_epitope_Rep1 930.5208388558999 930.51974993586 51.693 2 -1.2669984720368006 0.3740532856197456 1.0 ['ENST00000528819.1_1_11:74570221-74618263:-|nuORF', 'nc|ENSG00000166435|Q6P2D8-5|XRRA1', 'nc|ENSG00000166435|Q6P2D8-2|XRRA1', 'nc|ENSG00000166435|Q6P2D8-4|XRRA1', 'nc|ENSG00000166435|Q6P2D8-3|XRRA1', 'nc|ENSG00000166435|Q6P2D8|XRRA1', 'ENSG00000166435|ENST00000684022|XRRA1'] 81841 8455 PSGTFLVRRHR True PC9_epitope_Rep6 1324.7476358581598 1324.74652993586 42.221 2 -1.2670361903770617 0.3740532856197456 1.0 ['ENST00000533685.1_1_11:64900480-64900579:-|nuORF'] 99837 10547 SLGYGHTVPL True PC9_epitope_Rep4 1042.54474510462 1042.54364993586 48.3 2 -1.2670950882257102 0.37408546673366094 1.0 ['ENST00000472190.5_1_1:233765551-233807273:+|nuORF'] 12932 10936 DLNMESRPV True PC9_epitope_Rep4 1059.50189431647 1059.5007899358602 49.834 2 -1.2671220644359429 0.3741053921568627 1.0 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D'] 58029 9576 LERGFSVKYS True PC9_epitope_Rep3 1184.61897267404 1184.6178699358602 41.784 2 -1.267146119000628 0.3741161476906486 1.0 ['nc|ENSG00000139292|O75473-3|LGR5', 'nc|ENSG00000139292|O75473-2|LGR5', 'ENSG00000139292|ENST00000266674|LGR5'] 72176 18612 MRPLLRIC True H1975_Epitope_Rep1 1000.56741220884 1000.56630993586 77.618 2 -1.2671828256700461 0.3741161476906486 1.0 ['ENST00000229332.10_3_12:8276291-8276363:+|nuORF'] 107470 8721 SYYNFTNNN True PC9_epitope_Rep1 1135.45705229903 1135.4559499358602 38.383 2 -1.2672042255041152 0.3741161476906486 1.0 ['BCAS3|p.N505Y|1|0.27|ENSG00000141376|chr17:61015777-61015777|A/T|missense_variant'] 85027 17369 QIGRLFQNP True PC9_epitope_Rep6 1071.58252759567 1071.5814299358601 79.425 2 -1.267424282651046 0.37418508896622715 1.0 ['ENST00000495554.1_1_1:153609256-153609364:+|nuORF'] 103508 15340 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 65.708 2 -1.2676750918750785 0.374217266098891 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 22522 10350 ETLAEYQR True PC9_epitope_Rep3 1008.48762415132 1008.48652993586 44.755 2 -1.2678602817615707 0.37427395044482026 1.0 ['ENST00000538126.5_1_16:71712656-71757677:-|nuORF', 'nc|ENSG00000040199|Q6ZVD8-2|PHLPP2', 'nc|ENSG00000040199|Q6ZVD8-3|PHLPP2', 'ENSG00000040199|ENST00000568954|PHLPP2'] 121584 14478 VGKYFWPRI True NCI_RA007_Epitope_Rep5 1164.6443995762397 1164.64330993586 62.371 2 -1.2679065986549873 0.37429387184922863 1.0 ['ENST00000511405.1_1_5:111575355-111600594:-|nuORF', 'ENSG00000129595|ENST00000261486|EPB41L4A'] 13562 21914 DPLYVARRLVR True PC9_epitope_Rep3 1356.79900272468 1356.7979099358602 89.593 2 -1.2679914957578404 0.3743781399338316 1.0 ['nc|ENSG00000124535|Q96S55-2|WRNIP1', 'ENSG00000124535|ENST00000380773|WRNIP1', 'nc|ENSG00000124535|Q96S55-4|WRNIP1', 'nc|ENSG00000124535|Q96S55-3|WRNIP1'] 67952 21322 LTLLHVLH True PC9_epitope_Rep2 944.5807366905201 944.57962993586 87.479 2 -1.2679949834213682 0.3743781399338316 1.0 ['nc|ENSG00000059377|P24557-2|TBXAS1', 'ENSG00000059377|ENST00000448866|TBXAS1', 'nc|ENSG00000059377|P24557-3|TBXAS1'] 79324 22622 PGKPYILTV True PC9_epitope_Rep1 986.5800679841799 986.57896993586 91.825 2 -1.2680026583597084 0.3743781399338316 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant'] 25422 17086 FEKYQRLLEKK True NCI_RA007_Epitope_Rep1 1480.8401988303197 1480.83910993586 70.592 2 -1.268139253237468 0.3744011370737505 1.0 ['ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'ENSG00000167333|ENST00000300747|TRIM68', 'ENST00000532108.1_1_11:4623360-4626734:-|nuORF'] 100750 10857 SLRLSTPV True PC9_epitope_Rep1 871.51271670035 871.51160993586 46.647 2 -1.268253936079138 0.3744011370737505 1.0 ['nc|ENSG00000156920|Q8IZF6-2|ADGRG4', 'nc|ENSG00000156920|Q8IZF6-3|ADGRG4', 'ENSG00000156920|ENST00000394143|ADGRG4', 'ADGRG4|p.P1292Hfs*5|1|0.3|ENSG00000156920|chrX:136347580-136347580|C/-|frameshift_variant', 'ADGRG4|p.T1661Pfs*7|1|0.56|ENSG00000156920|chrX:136348684-136348684|C/-|frameshift_variant'] 79597 5119 PGVSVSNSLN True PC9_epitope_Rep5 972.4876241513201 972.48652993586 24.715 2 -1.2682614270024994 0.3744011370737505 1.0 ['ENST00000540883.1_1_12:65116746-65122837:-|nuORF'] 46044 7565 ISVSNLFM True H1975_Epitope_Rep3 909.46298962661 909.46188993586 34.08 2 -1.2684437230282577 0.3744226221835602 1.0 ['nc|ENSG00000205213|Q9BXB1-2|LGR4', 'ENSG00000205213|ENST00000379214|LGR4'] 41997 20917 IEDLRAQIL True PC9_epitope_Rep2 1069.6131590176099 1069.61206993586 85.903 2 -1.2684734772280035 0.3744226221835602 1.0 ['CON__H-INV:HIT000015463'] 99370 14439 SLDVIQVG True PC9_epitope_Rep3 829.4545331178898 829.45342993586 60.646 2 -1.2684772242417262 0.3744226221835602 1.0 ['ENST00000512027.1_1_5:176940338-176940763:-|nuORF'] 140916 6813 YYWRQWAAQDR True NCI_RA007_Epitope_Rep3 1541.71639529953 1541.71528993586 33.902 2 -1.268486759130376 0.3744226221835602 1.0 ['ENST00000460417.5_1_1:36826853-36831666:-|nuORF'] 31601 24193 GEGCAGCF True H1975_Epitope_Rep2 742.2414462005 742.2408949679301 99.593 1 -1.2685228723157393 0.3744226221835602 1.0 ['ENST00000446041.6_1_3:140660682-140660838:+|nuORF'] 91186 17868 RLQCFMKY True NCI_RA007_Epitope_Rep4 1087.5306923469498 1087.52958993586 77.356 2 -1.2685593554018468 0.3744226221835602 1.0 ['ENSG00000036448|ENST00000262113|MYOM2'] 22792 6088 EVDLPAMIFW True PC9_epitope_Rep2 1219.59473207215 1219.59362993586 28.81 2 -1.26866390471447 0.37446245451538207 1.0 ['ENST00000495072.1_1_1:46165678-46165810:-|nuORF'] 31423 9189 GEDKFQWL True PC9_epitope_Rep5 1021.48689587533 1021.48578993586 40.29 2 -1.2686750178102453 0.37446245451538207 1.0 ['ENSG00000156381|ENST00000286918|ANKRD9'] 125198 19577 VLQIMEKMP True PC9_epitope_Rep1 1087.57697383303 1087.57586993586 80.129 2 -1.2687964797213496 0.3745068731469457 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant', 'SACS|p.Q886H|1|0.28|ENSG00000151835|chr13:23341218-23341218|C/G|missense_variant'] 101427 505 SNNDDDED True NCI_RA007_Epitope_Rep2 922.27881315354 922.27770993586 2.7679 2 -1.2688219406460086 0.3745099480544938 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 37828 13654 HDHLELFLKM True PC9_epitope_Rep1 1281.65397828377 1281.65288993586 57.375 2 -1.268855104225444 0.3745099480544938 1.0 ['ENSG00000168152|ENST00000302236|THAP9'] 5728 13913 APAVPLLSS True PC9_epitope_Rep5 853.4909186266101 853.49037496793 58.537 1 -1.2689036506727873 0.37454211332312404 1.0 ['OR4A5|p.C237Afs*32|1|0.28|ENSG00000221840|chr11:54707591-54707591|C/-|frameshift_variant'] 106501 14547 SVVLTDRNVP True PC9_epitope_Rep6 1098.6033226099 1098.6022299358601 67.849 2 -1.2690900440217172 0.374565100210712 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 74836 8745 NLPPRIFAQCW True NCI_RA007_Epitope_Rep2 1343.68086173795 1343.6797699358601 38.662 2 -1.2691267592088276 0.374565100210712 1.0 ['ENST00000360304.7_2_3:123419304-123419451:-|nuORF'] 118005 9074 VASLLVFQYAA True NCI_RA007_Epitope_Rep1 1180.64921017316 1180.64810993586 39.299 2 -1.269150732836389 0.374565100210712 1.0 ['ENSG00000283703|ENST00000686984|VSIG10L2', 'nc|ENSG00000283703|P0DP72|VSIG10L2'] 75080 1119 NMQKARELWD True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 6.1636 3 -1.2692233429356874 0.37457276213110535 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 32863 25589 GIKRLPLLQKR True H1975_Epitope_Rep1 1320.8717737421196 1320.8701349037901 106.07 3 -1.2692830029385467 0.3745911579875785 1.0 ['ENST00000008527.9_1_12:107487412-107487586:-|nuORF'] 4573 24177 ALAAALTAAA True PC9_epitope_Rep4 842.48616759934 842.48561496793 101.47 1 -1.2692859048116694 0.3745911579875785 1.0 ['ENSG00000223496|ENST00000435634|EXOSC6'] 66967 20237 LSYYALHHW True PC9_epitope_Rep1 1188.5716285587998 1188.56998490379 82.668 3 -1.2692892976823131 0.3745911579875785 1.0 ['ENSG00000184574|ENST00000329858|LPAR5'] 126799 9571 VPSQPPAA True PC9_epitope_Rep5 765.4021036222099 765.40100993586 41.775 2 -1.2693152234077443 0.3745911579875785 1.0 ['ENSG00000128709|ENST00000249499|HOXD9'] 68499 9992 LTVLEPMEKPI True NCI_RA007_Epitope_Rep1 1268.70501079712 1268.70390993586 42.872 2 -1.2694540285088478 0.3746233187152412 1.0 ['ENSG00000101825|ENST00000217939|MXRA5'] 98578 3147 SIMTYVSLYYH True NCI_RA007_Epitope_Rep1 1375.64822419699 1375.64656490379 16.132 3 -1.2696208433196712 0.3746493710114039 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 55395 6264 LASTLEPP True NCI_RA007_Epitope_Rep2 826.44363408102 826.44252993586 28.97 2 -1.2696573906041642 0.3746493710114039 1.0 ['ENSG00000167595|ENST00000646935|PROSER3'] 23023 21331 EVKEIFRKSP True PC9_epitope_Rep3 1231.6924719674698 1231.6913699358602 87.346 2 -1.2697603296726483 0.3746493710114039 1.0 ['ENSG00000187097|ENST00000334696|ENTPD5'] 78929 10290 PFEQDEEILR True PC9_epitope_Rep1 1274.6142812164198 1274.6131899358602 44.465 2 -1.2697710622033604 0.3746493710114039 1.0 ['ENSG00000198355|ENST00000360612|PIM3'] 20221 9758 ENTRRVYK True NCI_RA007_Epitope_Rep5 1064.57269118796 1064.5715899358602 44.179 2 -1.2697790884904592 0.3746493710114039 1.0 ['ENSG00000169902|ENST00000304842|TPST1'] 10530 15623 CPMLQNLA True NCI_RA007_Epitope_Rep4 888.41974491564 888.41864993586 67.866 2 -1.269807079776181 0.3746555124138016 1.0 ['ENST00000218789.9_3_13:111957024-111957249:+|nuORF'] 129417 6082 VTEILFISGSP True H1975_Epitope_Rep3 1161.6281403754099 1161.6270499358602 28.407 2 -1.269839324602439 0.3746555124138016 1.0 ['nc|ENSG00000131620|Q5XXA6-3|ANO1'] 79052 19430 PFRGRKEKVKR True NCI_RA007_Epitope_Rep3 1399.8524352798697 1399.8507749037901 84.779 3 -1.2699411436234713 0.3746555124138016 1.0 ['ENSG00000198873|ENST00000392870|GRK5'] 5612 3237 APAAPPSALG True PC9_epitope_Rep4 850.45486747106 850.45376993586 18.38 2 -1.2700249765909624 0.3746555124138016 1.0 ['ENSG00000088038|ENST00000221232|CNOT3'] 130310 11490 VTTLVTLP True NCI_RA007_Epitope_Rep1 842.51131971802 842.51022993586 48.658 2 -1.2701668743153463 0.3746830791842734 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant', 'USH2A|p.V3050Sfs*8|1|0.23|ENSG00000042781|chr1:215844404-215844404|C/-|frameshift_variant', 'USH2A|p.R3285Gfs*16|1|0.23|ENSG00000042781|chr1:215799013-215799013|C/-|frameshift_variant'] 80514 25678 PLLLLPLL True NCI_RA007_Epitope_Rep1 890.6204762441799 890.61936993586 106.28 2 -1.2701796559181124 0.3746830791842734 1.0 ['ENSG00000008516|ENST00000336577|MMP25', 'EPHB3|p.A550Pfs*56|1|0.48|ENSG00000182580|chr3:184577903-184577903|G/-|frameshift_variant', 'ENSG00000182580|ENST00000330394|EPHB3', 'GRM1|p.V1166Rfs*83|1|0.34|ENSG00000152822|chr6:146434701-146434702|-/C|frameshift_variant'] 1976 13978 AEIYGGYAAY True H1975_Epitope_Rep2 1076.48147614172 1076.4803699358602 58.913 2 -1.2702376671969051 0.3747029860617789 1.0 ['nc|ENSG00000167281|A6NFN3|RBFOX3', 'nc|ENSG00000167281|A6NFN3-2|RBFOX3', 'ENSG00000167281|ENST00000693108|RBFOX3'] 111872 8425 TLRNEHLQ True PC9_epitope_Rep3 1009.53049202281 1009.52938993586 37.371 2 -1.2702660998933177 0.3747045351557238 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 85478 18601 QLHRRKVIS True NCI_RA007_Epitope_Rep4 1135.69380938015 1135.6921649037902 80.457 3 -1.2702875019594033 0.3747045351557238 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 52104 26725 KLPILPRDHS True PC9_epitope_Rep5 1174.68224163694 1174.68114993586 109.02 2 -1.2703282882777922 0.3747045351557238 1.0 ['nc|ENSG00000133106|Q96J88|EPSTI1', 'nc|ENSG00000133106|Q96J88-3|EPSTI1'] 68432 8388 LTTLHDMRY True H1975_Epitope_Rep3 1148.5648289261999 1148.56372993586 37.247 2 -1.270404981579866 0.3747045351557238 1.0 ['nc|ENSG00000106069|P52757-6|CHN2', 'nc|ENSG00000106069|P52757-5|CHN2', 'nc|ENSG00000106069|P52757-7|CHN2', 'nc|ENSG00000106069|P52757-4|CHN2', 'nc|ENSG00000106069|P52757-8|CHN2', 'nc|ENSG00000106069|P52757-3|CHN2', 'ENSG00000106069|ENST00000222792|CHN2', 'nc|ENSG00000106069|P52757-9|CHN2'] 72671 15133 MYDIFYYVRYF True PC9_epitope_Rep5 1578.72172349042 1578.72007490379 63.214 3 -1.2704501654256697 0.3747045351557238 1.0 ['ENST00000492560.6_1_7:139529050-139575514:+|nuORF'] 4352 8747 AIPDDQGW True NCI_RA007_Epitope_Rep1 900.39774651776 900.39664993586 38.026 2 -1.2705517568173699 0.3747076041296707 1.0 ['nc|ENSG00000188747|Q86UR1-2|NOXA1', 'ENSG00000188747|ENST00000683555|NOXA1'] 20226 15087 ENVEKLKNA True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 65.965 2 -1.270604024381 0.3747076041296707 1.0 ['ENST00000262160.10_3_18:45352587-45352647:-|nuORF'] 68905 17558 LVESFWKAK True PC9_epitope_Rep4 1106.6124307416198 1106.61132993586 75.555 2 -1.2706424654007802 0.37473975555392264 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 95924 15808 SDWRDLPNIE True PC9_epitope_Rep5 1243.58331544131 1243.5816749037901 65.795 3 -1.2707289783428652 0.37475965954320006 1.0 ['nc|ENSG00000130816|P26358-3|DNMT1', 'nc|ENSG00000130816|P26358|DNMT1', 'ENSG00000130816|ENST00000359526|DNMT1', 'ENST00000586588.5_1_19:10244345-10254710:-|nuORF'] 129195 17156 VTDHLEYHL True PC9_epitope_Rep2 1125.54547338061 1125.54436993586 71.248 2 -1.2708631727886726 0.3747918095424709 1.0 ['ENSG00000125831|ENST00000377009|CST11'] 70090 25150 LYILAAKTL True H1975_Epitope_Rep2 1004.6270181766 1004.62592993586 103.33 2 -1.2709877576426396 0.37479946605924785 1.0 ['ENSG00000205670|ENST00000399292|SMIM11'] 3822 16672 AGVSFALL True PC9_epitope_Rep1 776.4432401582 776.44214993586 68.958 2 -1.2712759095359794 0.37485151667299377 1.0 ['ENSG00000109158|ENST00000264318|GABRA4'] 54817 21037 LAFHPHGA True PC9_epitope_Rep4 848.42932142956 848.42822993586 89.079 2 -1.2712868947610323 0.37485151667299377 1.0 ['ENST00000368457.2_1_1:154930914-154931193:-|nuORF'] 96670 11826 SENQLQTVNF True PC9_epitope_Rep1 1178.5567663402999 1178.5551149037901 50.354 3 -1.2713671706398937 0.3749081557678178 1.0 ['ENST00000569461.1_1_16:81045544-81053727:+|nuORF', 'nc|ENSG00000166451|Q96H22-2|CENPN', 'CENPN|p.L222Tfs*18|1|0.12|ENSG00000166451|chr16:81024743-81024744|CT/-|frameshift_variant', 'nc|ENSG00000166451|Q96H22-5|CENPN', 'nc|ENSG00000166451|Q96H22-4|CENPN', 'ENSG00000166451|ENST00000305850|CENPN', 'nc|ENSG00000166451|Q96H22-3|CENPN'] 37952 2061 HEEQYYQYT True NCI_RA007_Epitope_Rep1 1259.50948179471 1259.5083899358601 10.837 2 -1.271414882158299 0.37491581048480915 1.0 ['ENST00000513178.1_1_4:47954638-48018683:-|nuORF'] 128767 7091 VSQLQAFL True PC9_epitope_Rep5 904.5018176634799 904.50072993586 32.241 2 -1.2714189081595724 0.3749188739086245 1.0 ['ENSG00000070182|ENST00000644917|SPTB', 'SPTB|p.A1794Pfs*106|1|0.18|ENSG00000070182|chr14:64772753-64772753|C/-|frameshift_variant', 'nc|ENSG00000070182|P11277-3|SPTB', 'nc|ENSG00000070182|P11277|SPTB'] 59495 7609 LGPIVHDRKSQ True PC9_epitope_Rep4 1248.6938689498 1248.69223490379 36.649 3 -1.271419838299894 0.3749188739086245 1.0 ['ENSG00000088387|ENST00000682017|DOCK9'] 111971 6412 TLSGTIAI True NCI_RA007_Epitope_Rep1 774.44871946146 774.44762993586 28.966 2 -1.2714678133648765 0.3749219371823915 1.0 ['nc|ENSG00000143493|Q9NVH2-3|INTS7', 'nc|ENSG00000143493|Q9NVH2-2|INTS7', 'ENSG00000143493|ENST00000366994|INTS7', 'nc|ENSG00000143493|Q9NVH2-4|INTS7'] 66430 20668 LSRNDAVDV True PC9_epitope_Rep1 987.4985231881899 987.4974299358599 84.323 2 -1.2714678764488578 0.3749219371823915 1.0 ['ENSG00000274588|ENST00000611977|DGKK'] 5300 21350 ALSEDLRTMR True NCI_RA007_Epitope_Rep4 1190.60775636734 1190.60717496793 92.549 1 -1.271522960929282 0.37495408125780616 1.0 ['ENSG00000179046|ENST00000682553|TRIML2'] 127557 3036 VQVQRDRNEF True H1975_Epitope_Rep1 1289.6476470333698 1289.64601490379 15.452 3 -1.271593723469748 0.37498469450226524 1.0 ['CFAP45|p.D444N|1|0.29|ENSG00000213085|chr1:159876578-159876578|C/T|missense_variant'] 30782 13196 GAPGRGDR True NCI_RA007_Epitope_Rep2 784.39399855 784.3934549679301 55.963 1 -1.2716259811133377 0.37498469450226524 1.0 ['ENST00000342427.6_1_20:32379592-32379847:+|nuORF'] 54810 8638 LAFESTKSTSP True H1975_Epitope_Rep1 1166.58191845898 1166.58082993586 38.155 2 -1.2716305106928154 0.37498469450226524 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant'] 41433 7985 IAVATSPPN True NCI_RA007_Epitope_Rep1 868.46543215476 868.4648849679301 35.053 1 -1.2716484179870178 0.37498469450226524 1.0 ['ENST00000560591.5_1_15:67835673-67951132:+|nuORF'] 90233 23478 RHMKIHTG True H1975_Epitope_Rep1 978.5181535173 978.51704993586 97.558 2 -1.2717187702840445 0.3750122440983446 1.0 ['ENSG00000178150|ENST00000595607|ZNF114', 'ENSG00000174255|ENST00000482457|ZNF80', 'nc|ENSG00000178150|Q8NC26-2|ZNF114'] 118286 8962 VDALRLVSS True PC9_epitope_Rep4 958.54474510462 958.54364993586 42.019 2 -1.2717465966883634 0.3750122440983446 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 949 11917 ADVYLHRRGR True H1975_Epitope_Rep1 1241.67413656473 1241.67302993586 50.84 2 -1.2718124460518714 0.37501377376740086 1.0 ['ENST00000310496.8_1_17:80009186-80009400:-|nuORF'] 119027 20694 VEGDIKAQF True PC9_epitope_Rep1 1005.5131106231698 1005.51257496793 84.424 1 -1.27181903291107 0.37501377376740086 1.0 ['ENST00000429744.2_1_1:52645740-52646091:+|nuORF'] 12958 9300 DLPDRDTWK True NCI_RA007_Epitope_Rep2 1144.55128703704 1144.55018993586 40.781 2 -1.2718286600417097 0.37501377376740086 1.0 ['ENSG00000157103|ENST00000287766|SLC6A1'] 66353 6185 LSQTCCLVVP True PC9_epitope_Rep5 1061.5249382601698 1061.5238499358602 28.774 2 -1.271858797097909 0.37501377376740086 1.0 ['ENST00000318562.12_2_11:727090-727309:+|nuORF'] 73601 6671 NGFISESSSI True NCI_RA007_Epitope_Rep4 1039.48220441771 1039.48110993586 32.282 2 -1.2718777362148546 0.37501377376740086 1.0 ['CFHR4|p.T541Kfs*30|2|0.26|ENSG00000134365|chr1:196918294-196918294|C/-|frameshift_variant', 'nc|ENSG00000134365|Q92496-2|CFHR4', 'ENSG00000134365|ENST00000608469|CFHR4', 'ENSG00000116785|ENST00000367425|CFHR3', 'nc|ENSG00000134365|Q92496-3|CFHR4'] 5203 11029 ALPRTLQP True PC9_epitope_Rep3 894.5287011176599 894.52760993586 47.414 2 -1.271921187196844 0.37501530324918586 1.0 ['ENST00000480424.6_1_16:630268-633631:+|nuORF'] 122899 22021 VGVRRRGNVRT True PC9_epitope_Rep4 1268.7537838677597 1268.7526899358602 92.926 2 -1.2719216068178287 0.37501530324918586 1.0 ['ENSG00000101265|ENST00000379400|RASSF2', 'nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 111914 6557 TLRSSGQTLVY True NCI_RA007_Epitope_Rep2 1223.65100107831 1223.64934490379 30.118 3 -1.271921889871055 0.37501530324918586 1.0 ['ENSG00000185958|ENST00000327337|FAM186A'] 68276 10105 LTRKEWIQFM True H1975_Epitope_Rep2 1350.71182751306 1350.7101749037902 43.863 3 -1.271958210479196 0.37501530324918586 1.0 ['ENSG00000172123|ENST00000304905|SLFN12'] 106101 8552 SVNDKTQWRY True H1975_Epitope_Rep2 1295.62584895963 1295.62420490379 37.85 3 -1.2719756749493238 0.37501530324918586 1.0 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1'] 15780 9025 EDFLLSNGY True H1975_Epitope_Rep1 1056.47639076128 1056.47528993586 39.621 2 -1.272027895015993 0.3750183634493903 1.0 ['ENSG00000162526|ENST00000373534|TSSK3'] 122981 9729 VGWSDSYTCEY True PC9_epitope_Rep1 1308.49686850568 1308.4957699358602 42.28 2 -1.2720321829959806 0.3750183634493903 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 80286 15577 PLEFEWYF True PC9_epitope_Rep5 1129.51204799401 1129.51039490379 64.927 3 -1.272080640991032 0.375033665499596 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.G2269Afs*6|1|0.24|ENSG00000158683|chr7:47827398-47827398|C/-|frameshift_variant', 'PKD1L1|p.R1956Pfs*77|1|0.33|ENSG00000158683|chr7:47836996-47836997|GC/-|frameshift_variant'] 81277 22993 PPPTIRWFK True PC9_epitope_Rep3 1140.64439957624 1140.64276490379 93.71 3 -1.2721259992342624 0.375033665499596 1.0 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-3|ROR1'] 79221 18979 PGGGFGGG True NCI_RA007_Epitope_Rep3 604.26052476896 604.25997496793 82.938 1 -1.2721716980245243 0.3750535580936991 1.0 ['CON__Q6IFZ6'] 10195 16883 CDESFCMLL True H1975_Epitope_Rep2 1059.40752554943 1059.40697496793 70.186 1 -1.2721833306230061 0.37506120850063657 1.0 ['nc|ENSG00000160352|Q96N38-2|ZNF714', 'nc|ENSG00000160352|Q96N38|ZNF714', 'ENSG00000160352|ENST00000456283|ZNF714', 'ENST00000601416.1_19:21281704-21301132:+|nuORF'] 10964 14706 DCGFGDGG True NCI_RA007_Epitope_Rep5 726.2279043113399 726.2273549679301 63.238 1 -1.2721978838625276 0.37506885872026835 1.0 ['ENSG00000108582|ENST00000225719|CPD'] 21524 19494 ERRQREHTRRK True NCI_RA007_Epitope_Rep2 1550.8614368237797 1550.8603299358601 80.755 2 -1.2723985960337203 0.37509639040869536 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant', 'nc|ENSG00000188738|Q5CZC0-2|FSIP2'] 133898 1970 WNEPLNETTAK True PC9_epitope_Rep5 1301.62518025329 1301.62354490379 10.9 3 -1.2724159477300236 0.37509639040869536 1.0 ['ENSG00000197056|ENST00000359858|ZMYM1'] 127074 13768 VPYSCCLP True PC9_epitope_Rep3 880.38229677776 880.38118993586 58.04 2 -1.2724355024415108 0.37509639040869536 1.0 ['ENSG00000158457|ENST00000486685|TSPAN33'] 12561 8841 DLDHTARKK True NCI_RA007_Epitope_Rep1 1082.58325587166 1082.5821499358601 38.389 2 -1.2724564339006883 0.37509639040869536 1.0 ['CENPJ|p.E646K|1|0.16|ENSG00000151849|chr13:24906102-24906102|C/T|missense_variant'] 62294 15240 LLQNTVHI True H1975_Epitope_Rep2 936.53926580136 936.53816993586 63.778 2 -1.2725128467179039 0.37509639040869536 1.0 ['nc|ENSG00000105976|P08581-2|MET', 'ENSG00000105976|ENST00000397752|MET'] 78674 18898 PECCPGEM True H1975_Epitope_Rep3 864.2815967603199 864.28048993586 79.261 2 -1.2725656111743966 0.37509639040869536 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 137253 18038 YLFVGNIV True PC9_epitope_Rep6 923.5116540711899 923.51054993586 82.014 2 -1.27256812374275 0.37509639040869536 1.0 ['nc|ENSG00000132932|Q9NTI2-1|ATP8A2', 'ENSG00000132932|ENST00000381655|ATP8A2', 'ENST00000491840.1_1_13:26141407-26501380:+|nuORF', 'ENST00000281620.10_1_13:26279420-26594120:+|nuORF'] 94231 22015 RWQRKKTT True PC9_epitope_Rep6 1102.6359601508598 1102.63486993586 97.602 2 -1.2726154873869349 0.37509639040869536 1.0 ['ENST00000367264.6_2_1:202698186-202698243:-|nuORF'] 94799 23700 RYLRAQRP True PC9_epitope_Rep3 1058.6097454030198 1058.60864993586 96.448 2 -1.2726183853119906 0.37509639040869536 1.0 ['ENSG00000142235|ENST00000600059|LMTK3'] 117765 23571 VALKPLGGL True PC9_epitope_Rep6 866.5589386167799 866.55784993586 103.81 2 -1.272677807885419 0.37509639040869536 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 17093 21822 EGRKRWKRK True H1975_Epitope_Rep2 1242.7421565548996 1242.74050490379 90.247 3 -1.2726916426352368 0.37510403916768664 1.0 ['nc|ENSG00000118322|O94823-3|ATP10B'] 126138 17130 VPEWQHPL True PC9_epitope_Rep3 1004.50796567308 1004.50686993586 71.045 2 -1.2728007559029633 0.3751484069962424 1.0 ['ENST00000460090.5_1_5:68581275-68590699:-|nuORF', 'ENST00000396496.6_1_5:68588152-68590699:-|nuORF'] 36885 20579 GVQNITAA True PC9_epitope_Rep6 772.40791727864 772.4073649679301 91.886 1 -1.2728194598063154 0.37514992778988077 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 78668 10671 PEAVISGL True PC9_epitope_Rep2 784.43306939732 784.43196993586 46.358 2 -1.2728602257492483 0.37514992778988077 1.0 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 76435 12430 NSVPAAYYLRP True H1975_Epitope_Rep3 1249.64552177505 1249.6444299358602 53.002 2 -1.2729166111821626 0.37514992778988077 1.0 ['ENSG00000174145|ENST00000309447|NWD2'] 128336 9173 VSDLGSLLLQ True NCI_RA007_Epitope_Rep4 1043.58627556343 1043.5851699358602 42.124 2 -1.2729291174332775 0.37514992778988077 1.0 ['ENST00000549198.1_1_12:53342525-53343518:-|nuORF', 'ENST00000551318.1_1_12:53342525-53343546:-|nuORF'] 69183 23747 LVMCIVLRP True NCI_RA007_Epitope_Rep4 1042.6031290112198 1042.6020299358602 102.96 2 -1.2729609956916603 0.37514992778988077 1.0 ['ENST00000480838.1_1_2:163066458-163099837:-|nuORF', 'ENSG00000078098|ENST00000188790|FAP'] 67960 10932 LTLLWVWYVYR True H1975_Epitope_Rep3 1510.8336568979 1510.83254993586 47.136 2 -1.2730015330485553 0.3751698140918159 1.0 ['nc|ENSG00000101194|Q9BYT1-2|SLC17A9', 'ENSG00000101194|ENST00000370351|SLC17A9', 'ENST00000459704.6_1_20:61593743-61595647:+|nuORF', 'nc|ENSG00000101194|Q9BYT1-3|SLC17A9', 'ENST00000488738.5_1_20:61584086-61594126:+|nuORF'] 108425 11098 TEEFIIRIP True H1975_Epitope_Rep2 1116.6179100448799 1116.6168099358601 47.724 2 -1.2731260170331569 0.37520193861066237 1.0 ['ENSG00000013364|ENST00000357402|MVP', 'ENST00000565830.5_1_16:29841852-29843003:+|nuORF', 'ENST00000563096.1_1_16:29841852-29842056:+|nuORF'] 7691 7863 ASPPSAGLSSF True H1975_Epitope_Rep2 1019.49237517859 1019.49126993586 35.191 2 -1.2733000969521902 0.3752830165587634 1.0 ['ENST00000578361.5_1_17:79969964-79975195:+|nuORF'] 100575 12535 SLQDRYVP True PC9_epitope_Rep2 976.4977949122 976.49668993586 53.522 2 -1.2733419928292127 0.3752906620976625 1.0 ['nc|ENSG00000082269|Q9P2D6-3|FAM135A', 'nc|ENSG00000082269|Q9P2D6-2|FAM135A', 'nc|ENSG00000082269|Q9P2D6-4|FAM135A', 'ENSG00000082269|ENST00000418814|FAM135A'] 9175 10325 AVNVKSVAEA True PC9_epitope_Rep4 986.5396597241798 986.53856993586 47.405 2 -1.2734225317216008 0.3752967667719118 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 26594 5066 FKEHHWKKFF True PC9_epitope_Rep3 1432.7404252193999 1432.73878490379 24.572 3 -1.2734382743630543 0.3752967667719118 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000526038.1_1_9:100132196-100133123:+|nuORF'] 82577 22 PVHPLLKRVP True NCI_RA007_Epitope_Rep2 1154.72879790654 1154.72716490379 0.10619 3 -1.2734644129154027 0.3752967667719118 1.0 ['ENST00000514191.5_1_14:73404686-73407184:+|nuORF'] 32917 11840 GIPGMNGQ True PC9_epitope_Rep1 772.3537735308 772.35266993586 50.407 2 -1.273513787006408 0.3752967667719118 1.0 ['COL25A1|p.D401Ifs*29|1|0.47|ENSG00000188517|chr4:108860968-108860968|C/-|frameshift_variant', 'nc|ENSG00000188517|Q9BXS0-3|COL25A1', 'COL25A1|p.M543Wfs*67|1|0.17|ENSG00000188517|chr4:108844522-108844522|G/-|frameshift_variant', 'nc|ENSG00000188517|Q9BXS0-2|COL25A1', 'ENSG00000188517|ENST00000399132|COL25A1'] 131240 2013 VVPVLAGVGPL True NCI_RA007_Epitope_Rep1 1019.6379172134699 1019.63682993586 10.578 2 -1.2735446154497998 0.37530287084852787 1.0 ['nc|ENSG00000167799|Q8WV74-2|NUDT8', 'ENSG00000167799|ENST00000376693|NUDT8', 'ENST00000534054.1_1_11:67395778-67396734:-|nuORF'] 63144 17224 LNREILQLP True PC9_epitope_Rep2 1094.64479349906 1094.64368993586 71.513 2 -1.2735874625422077 0.37530287084852787 1.0 ['ENSG00000089558|ENST00000264661|KCNH4'] 6583 14080 APWIKWTKV True PC9_epitope_Rep6 1127.64915060351 1127.6480499358602 66.03 2 -1.2736084023094523 0.37530287084852787 1.0 ['NCAN|p.R75W|1|0.1|ENSG00000130287|chr19:19219064-19219064|C/T|missense_variant'] 96515 9301 SELILVVAR True H1975_Epitope_Rep1 998.61243074162 998.61132993586 40.684 2 -1.2736858627945493 0.37530287084852787 1.0 ['ENST00000482069.5_1_10:79795365-79795422:+|nuORF'] 122059 24279 VGRAAAAAAAV True PC9_epitope_Rep2 926.5297637468198 926.52866993586 98.932 2 -1.2737121271743757 0.37531051530243886 1.0 ['ENSG00000137815|ENST00000389629|RTF1'] 85479 21136 QLHRRKVIS True PC9_epitope_Rep6 1135.69380938015 1135.6921649037902 94.146 3 -1.2737318778635953 0.3753181595692609 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 27125 6652 FLQSGVQS True NCI_RA007_Epitope_Rep1 864.43413202648 864.43302993586 29.887 2 -1.2738284192164764 0.3753395492254607 1.0 ['nc|ENSG00000119844|Q6ULP2-7|AFTPH', 'ENST00000498706.5_1_2:64778608-64806757:+|nuORF', 'nc|ENSG00000119844|Q6ULP2-8|AFTPH', 'nc|ENSG00000119844|Q6ULP2-6|AFTPH', 'ENSG00000119844|ENST00000409933|AFTPH', 'nc|ENSG00000119844|Q6ULP2-9|AFTPH'] 123657 24157 VILVFFPLIAH True PC9_epitope_Rep2 1267.7692657361902 1267.7676149037902 98.445 3 -1.2738306996363487 0.3753395492254607 1.0 ['ENSG00000012232|ENST00000220562|EXTL3'] 39493 11567 HPAEWRLAL True NCI_RA007_Epitope_Rep3 1091.58761297611 1091.58650993586 52.628 2 -1.2738593730780239 0.3753395492254607 1.0 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 85755 14391 QLVLKLQP True PC9_epitope_Rep6 937.5960524014899 937.59494993586 67.252 2 -1.2738959997843096 0.3753395492254607 1.0 ['CNGA1|p.E486Q|1|0.15|ENSG00000198515|chr4:47937026-47937026|C/G|missense_variant'] 26659 14345 FLARGHRVL True PC9_epitope_Rep6 1067.63523187487 1067.63412993586 67.076 2 -1.2739043382929949 0.3753395492254607 1.0 ['ENST00000485113.5_1_1:146742566-146742704:+|nuORF'] 21635 8696 ERTIHYYQRQI True PC9_epitope_Rep3 1505.77391017565 1505.77169987172 38.398 4 -1.2739221528949685 0.3753395492254607 1.0 ['ENST00000435712.1_1_10:131904549-131906742:+|nuORF'] 111545 23601 TLLVLLAG True PC9_epitope_Rep5 798.5214904788999 798.52038993586 95.76 2 -1.2740463195183014 0.3753471924822886 1.0 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000573635.1_1_16:16381587-16388153:+|nuORF', 'ENST00000566823.1_1_16:14982940-14989499:+|nuORF'] 130971 5393 VVIYIKKL True H1975_Epitope_Rep2 974.6528390016199 974.65174993586 25.78 2 -1.274072473579625 0.37535483555207516 1.0 ['ENST00000439374.6_1_1:151023495-151023633:-|nuORF'] 88774 21256 RDKVLGYF True PC9_epitope_Rep3 996.5392658013599 996.53816993586 87.055 2 -1.2741360458797604 0.3753701211305518 1.0 ['ENSG00000213199|ENST00000349064|ASIC3', 'nc|ENSG00000213199|Q9UHC3-2|ASIC3', 'nc|ENSG00000213199|Q9UHC3-3|ASIC3'] 75282 8794 NPRRWWRWCWQ True NCI_RA007_Epitope_Rep1 1672.7946031339197 1672.7935099358601 38.209 2 -1.2741500126090215 0.3753701211305518 1.0 ['ENST00000564348.5_1_19:7982609-7983760:+|nuORF', 'ENST00000566166.1_1_19:7982552-7983971:+|nuORF'] 89963 1535 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 8.1326 3 -1.2742752516387874 0.3754144694179687 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 7686 13792 ASPLTPCSV True PC9_epitope_Rep3 873.42660411789 873.4260549679301 58.128 1 -1.2743385206193787 0.3754221112905594 1.0 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 31637 10309 GEGTVVVSYGV True H1975_Epitope_Rep1 1065.5342399905699 1065.53367496793 44.598 1 -1.2744363628665323 0.37542975297615405 1.0 ['ENSG00000125863|ENST00000347364|MKKS'] 35908 8788 GVAHLFDLDP True H1975_Epitope_Rep1 1082.53965972418 1082.53856993586 38.731 2 -1.2745654387959782 0.3754496292852424 1.0 ['ENSG00000079435|ENST00000244289|LIPE', 'nc|ENSG00000079435|Q05469-2|LIPE'] 95333 7267 SAGGAWGP True H1975_Epitope_Rep3 701.3132886178099 701.31274496793 32.925 1 -1.2746011704089903 0.37545727044717686 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF'] 5279 22925 ALRLEKIIHWP True PC9_epitope_Rep5 1374.8135901596597 1374.8119349037902 93.172 3 -1.2747044993887318 0.3754771459332485 1.0 ['TMEM185A|p.D161E|1|0.06|ENSG00000269556|chrX:149604011-149604011|G/T|missense_variant'] 113242 6941 TQEAEAEKPRK True H1975_Epitope_Rep1 1285.6626283911698 1285.66152993586 31.738 2 -1.2748513400869228 0.3754970209329924 1.0 ['ENSG00000185864|ENST00000682606|NPIPB4', 'ENSG00000169203|ENST00000550665|NPIPB12', 'ENSG00000254206|ENST00000698511|NPIPB11', 'nc|ENSG00000243716|C9JG80|NPIPB4', 'ENSG00000198064|ENST00000697092|NPIPB13', 'ENSG00000243716|ENST00000424340|NPIPB5', 'nc|ENSG00000169246|Q92617|NPIPB3', 'nc|ENSG00000169246|Q92617-6|NPIPB3', 'nc|ENSG00000169246|Q92617-5|NPIPB3', 'ENSG00000169246|ENST00000542817|NPIPB3', 'nc|ENSG00000169246|Q92617-3|NPIPB3', 'nc|ENSG00000169246|Q92617-2|NPIPB3'] 137226 7670 YLEQQLEDH True H1975_Epitope_Rep3 1173.5302172392899 1173.52912993586 34.485 2 -1.2749553115764087 0.37555509340249316 1.0 ['nc|ENSG00000103351|Q96AJ1-2|CLUAP1', 'ENSG00000103351|ENST00000576634|CLUAP1', 'ENST00000572632.1_1_16:3569992-3580585:+|nuORF'] 120782 6511 VGCKIKAL True PC9_epitope_Rep5 830.5047948689399 830.50368993586 30.018 2 -1.2749835817311672 0.37555509340249316 1.0 ['ENST00000558133.1_1_15:82335503-82336997:-|nuORF'] 131103 19401 VVMWRMVI True PC9_epitope_Rep5 1032.5612641992398 1032.5601699358601 79.672 2 -1.2750096278126517 0.37555509340249316 1.0 ['AGBL2|p.G622V|2|0.14|ENSG00000165923|chr11:47682019-47682019|C/A|missense_variant'] 71778 18738 MNIIYLRRFK True NCI_RA007_Epitope_Rep2 1352.7750964759596 1352.77398993586 77.685 2 -1.275017162511685 0.37555509340249316 1.0 ['nc|ENSG00000171962|Q9H069-2|DRC3', 'ENSG00000171962|ENST00000399187|DRC3'] 67716 6180 LTGHLCAP True PC9_epitope_Rep1 810.40580910366 810.40470993586 28.588 2 -1.2750714419314841 0.37555509340249316 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 97431 24756 SGGGGGGGGD True PC9_epitope_Rep1 676.24124587636 676.24069496793 100.11 1 -1.2751230972948544 0.37555509340249316 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1'] 67726 11756 LTGKQGRGRPR True H1975_Epitope_Rep1 1224.7163357298798 1224.7152299358602 50.211 2 -1.2752112880856306 0.37556273243296145 1.0 ['PATZ1|p.R265Q|1|0.17|ENSG00000100105|chr22:31344809-31344809|C/T|missense_variant'] 1641 8530 AEGAEPVAAW True PC9_epitope_Rep1 999.4661604307498 999.46506993586 37.648 2 -1.2752551134792565 0.3755657769187483 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2'] 100463 16059 SLPGVRILT True PC9_epitope_Rep2 954.58621599378 954.58510993586 67.026 2 -1.275262615452818 0.3755657769187483 1.0 ['ENST00000561460.5_1_15:40845570-40845711:+|nuORF'] 81424 20237 PQASVCFVD True NCI_RA007_Epitope_Rep5 964.4324177743199 964.43132993586 84.782 2 -1.2752945215961227 0.37557795337231203 1.0 ['ZNF544|p.E17V|1|0.34|ENSG00000198131|chr19:58246317-58246317|A/T|missense_variant'] 19112 6413 ELIEEFGQP True PC9_epitope_Rep2 1060.5076908895599 1060.5065899358601 30.077 2 -1.2753245492171812 0.37557795337231203 1.0 ['ENST00000481600.5_1_10:127417653-127452038:+|nuORF', 'nc|ENSG00000107938|Q3B7T1-5|EDRF1', 'ENSG00000107938|ENST00000356792|EDRF1', 'ENST00000419769.6_1_10:127430814-127452038:+|nuORF'] 87608 6118 QTSQVLTAV True PC9_epitope_Rep2 945.5131106231698 945.51200993586 28.928 2 -1.2753547114135113 0.37557795337231203 1.0 ['ENSG00000261150|ENST00000615648|EPPK1'] 4245 14569 AIHNPFRP True PC9_epitope_Rep1 950.50863437942 950.50752993586 60.864 2 -1.2753696974892819 0.37557795337231203 1.0 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B', 'ENSG00000240038|ENST00000684275|AMY2B', 'nc|ENSG00000240038|P19961-2|AMY2B'] 119209 18145 VEKNNLKEV True PC9_epitope_Rep5 1071.59242357303 1071.5913299358601 74.804 2 -1.2754250813802448 0.37557795337231203 1.0 ['CENPJ|p.E282V|1|0.18|ENSG00000151849|chr13:24909810-24909810|T/A|missense_variant'] 110693 19532 TIYRRVLP True PC9_epitope_Rep2 1016.6130994479598 1016.61200993586 80.513 2 -1.275433716311428 0.37557795337231203 1.0 ['nc|ENSG00000138193|Q9P212-2|PLCE1', 'ENSG00000138193|ENST00000371380|PLCE1'] 135386 14512 YDLPATINFII True H1975_Epitope_Rep3 1278.6859896047001 1278.6848899358602 61.182 2 -1.275463221538363 0.37557795337231203 1.0 ['ENSG00000204021|ENST00000404190|LIPK'] 88697 14503 RCLYWASPSIP True PC9_epitope_Rep2 1291.6383282196298 1291.6372299358602 61.055 2 -1.27546715304186 0.37557795337231203 1.0 ['ENST00000597219.1_3_19:58095687-58095951:+|nuORF'] 6936 23674 AQLMLLKFLRY True NCI_RA007_Epitope_Rep4 1394.81081327834 1394.8097099358602 102.67 2 -1.2755258176626787 0.3755886346123268 1.0 ['ENST00000563094.5_1_16:69200987-69201092:+|nuORF', 'ENST00000562237.5_1_16:69200987-69202772:+|nuORF'] 84525 16216 QGWLQQLP True PC9_epitope_Rep6 968.50796567308 968.50686993586 74.729 2 -1.2755263028679769 0.3755886346123268 1.0 ['ENST00000519574.1_1_2:219125758-219128073:+|nuORF'] 41802 10021 IDRTASPV True PC9_epitope_Rep5 857.4606811274899 857.45958993586 43.525 2 -1.2755663636117787 0.3755886346123268 1.0 ['ENST00000382363.7_1_22:30775266-30775527:-|nuORF'] 17025 13812 EGLSKTRKSVF True NCI_RA007_Epitope_Rep1 1250.6982856239 1250.69718993586 57.743 2 -1.275588153477594 0.37559627192446 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'ENST00000486937.5_1_21:47666536-47687014:-|nuORF'] 86664 21728 QRGQGRGP True PC9_epitope_Rep2 854.4470967520198 854.44598993586 89.053 2 -1.2756588599762522 0.3756237769080235 1.0 ['ENST00000597346.1_1_11:2720404-2720578:-|nuORF'] 65447 19544 LSFAASVTWR True PC9_epitope_Rep5 1136.59784330664 1136.59674993586 80.229 2 -1.2756835184406714 0.3756237769080235 1.0 ['ENST00000564978.5_2_16:28975357-28975525:+|nuORF'] 77860 16380 PAGKWRSYKGE True NCI_RA007_Epitope_Rep2 1277.6516697846498 1277.6510749679298 68.44 1 -1.2757122950651234 0.37565587505045195 1.0 ['ENSG00000164976|ENST00000297625|MYORG'] 92719 7748 RRKDERRKEK True NCI_RA007_Epitope_Rep2 1399.81202701987 1399.81092993586 34.765 2 -1.2757562749535052 0.37566959371866054 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10670171-10670590:-|nuORF'] 83289 20135 QAGIIPTEAV True PC9_epitope_Rep3 997.54441075145 997.5438649679301 82.704 1 -1.2757984745896633 0.37566959371866054 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 73584 7028 NGDPLNNTTPV True NCI_RA007_Epitope_Rep2 1140.5411162761602 1140.54000993586 31.96 2 -1.2758200497009753 0.37566959371866054 1.0 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'ERBB2-PPP1R1B|4|fusion', 'ERBB2-PPP1R1B|3|fusion', 'ERBB2-CTTN|3|fusion', 'ERBB2-CTTN|1|fusion', 'ERBB2-CTTN|4|fusion', 'ERBB2-CTTN|2|fusion', 'ENST00000584908.5_1_17:37856482-37868536:+|nuORF'] 5765 7177 APEEKASVGP True NCI_RA007_Epitope_Rep4 983.4923751785898 983.49126993586 34.229 2 -1.275825684678129 0.37566959371866054 1.0 ['ENSG00000120742|ENST00000239944|SERP1'] 78394 7833 PAVPSAPAAP True PC9_epitope_Rep4 876.4705175351999 876.46942993586 37.539 2 -1.2758317476993537 0.37566959371866054 1.0 ['ENSG00000266265|ENST00000583337|KLF14'] 105345 14793 STVVWVNV True PC9_epitope_Rep2 902.4861675993399 902.48506993586 62.165 2 -1.2760328338247426 0.3757062146892655 1.0 ['ENST00000540865.5_1_11:62620891-62622014:-|nuORF'] 20581 7567 EQEGPLEHV True NCI_RA007_Epitope_Rep2 1036.4825387708797 1036.48197496793 34.061 1 -1.2760365263556055 0.3757062146892655 1.0 ['ENST00000416600.6_1_20:3846990-3847266:+|nuORF'] 79234 19797 PGGGGYGG True PC9_epitope_Rep4 620.2554393885199 620.25489496793 84.275 1 -1.2760443298100768 0.3757062146892655 1.0 ['nc|ENSG00000113742|Q17RY0-2|CPEB4', 'ENSG00000113742|ENST00000265085|CPEB4'] 115951 20861 TVPSEPIW True PC9_epitope_Rep5 927.4701831820299 927.46908993586 85.294 2 -1.2760741235459498 0.3757062146892655 1.0 ['ENSG00000178726|ENST00000377103|THBD'] 93137 8438 RRRRHSHGREW True PC9_epitope_Rep2 1531.8093416812699 1531.80769490379 37.827 3 -1.276079065939737 0.3757062146892655 1.0 ['ENST00000376395.8_2_9:86322580-86322796:-|nuORF'] 41176 8962 HYVYMFLVKW True H1975_Epitope_Rep3 1384.7002002002 1384.6991099358602 39.467 2 -1.2761056557986457 0.3757062146892655 1.0 ['ENSG00000158517|ENST00000289473|NCF1', 'ENST00000398421.6_1_7:74188378-74193456:+|nuORF', 'nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF'] 115557 9650 TVHTVLKSP True PC9_epitope_Rep3 980.5654805492 980.56438993586 42.067 2 -1.2761304427817408 0.3757062146892655 1.0 ['ENSG00000101544|ENST00000262198|ADNP2'] 85245 20589 QKLFIRHITTK True H1975_Epitope_Rep2 1383.83505388023 1383.83341490379 85.287 3 -1.2761463080784976 0.3757062146892655 1.0 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1'] 44591 19501 IPGMLMKR True PC9_epitope_Rep1 944.52996407096 944.52886993586 79.829 2 -1.2762307191374722 0.37570925454901194 1.0 ['ENST00000289734.11_1_8:41556976-41559097:-|nuORF'] 101497 27079 SPAAATAAAA True PC9_epitope_Rep5 800.4028318981999 800.4022849679301 110.81 1 -1.276234981842788 0.37570925454901194 1.0 ['ENSG00000135631|ENST00000486777|RAB11FIP5', 'ENST00000566468.1_1_15:74883534-74883915:+|nuORF', 'nc|ENSG00000179361|Q8IVW6-3|ARID3B', 'ENSG00000179361|ENST00000346246|ARID3B', 'nc|ENSG00000179361|Q8IVW6|ARID3B'] 103850 17126 SRKAKTKAV True NCI_RA007_Epitope_Rep4 987.6189131043899 987.61780993586 74.192 2 -1.276266460761366 0.3757168886117123 1.0 ['ENST00000416034.1_1_21:45466808-45466907:-|nuORF'] 12927 7353 DLNHKTQENYR True NCI_RA007_Epitope_Rep2 1416.6745900572 1416.67348993586 33.224 2 -1.2764880173711644 0.37574897894299203 1.0 ['nc|ENSG00000140262|Q99081|TCF12', 'ENSG00000140262|ENST00000333725|TCF12', 'nc|ENSG00000140262|Q99081-4|TCF12', 'nc|ENSG00000140262|Q99081-2|TCF12'] 138445 8034 YREWRRYYEVW True H1975_Epitope_Rep1 1704.8161093408 1704.8150099358602 35.846 2 -1.2765075702223594 0.3757520176082172 1.0 ['ENSG00000118017|ENST00000236709|A4GNT'] 101258 7659 SLWMVHSP True PC9_epitope_Rep3 955.4585729525099 955.45746993586 34.46 2 -1.2765099091352676 0.3757520176082172 1.0 ['ENST00000338977.5_3_4:436159-436237:-|nuORF'] 22422 5862 ETFLQIRHG True H1975_Epitope_Rep3 1099.57744221523 1099.57687496793 27.563 1 -1.2765947111810272 0.3757947764843979 1.0 ['ENST00000381154.5_1_X:2838703-2839996:-|nuORF'] 116274 11306 TVVGVDVL True PC9_epitope_Rep3 800.4643695256 800.46326993586 48.494 2 -1.2766714993118242 0.3757947764843979 1.0 ['ENST00000431957.1_1_7:126935711-126936140:+|nuORF'] 19853 17848 ELVIWCISL True NCI_RA007_Epitope_Rep4 1074.5783537320199 1074.5772499358602 77.278 2 -1.276674747325043 0.3757947764843979 1.0 ['nc|ENSG00000006576|Q8N3S3-3|PHTF2', 'nc|ENSG00000006576|Q8N3S3-2|PHTF2', 'ENSG00000006576|ENST00000416283|PHTF2'] 124688 22237 VLISLRTFL True PC9_epitope_Rep5 1060.66446631448 1060.6633699358601 90.542 2 -1.276677932997009 0.3757947764843979 1.0 ['nc|ENSG00000167077|Q5TIA1-5|MEI1', 'nc|ENSG00000167077|Q5TIA1-3|MEI1', 'nc|ENSG00000167077|Q5TIA1-2|MEI1', 'ENSG00000167077|ENST00000401548|MEI1', 'ENST00000473736.5_1_22:42172081-42174878:+|nuORF'] 16081 7644 EEDHRCDVWWE True H1975_Epitope_Rep3 1502.5884774747399 1502.58738993586 34.384 2 -1.2767439154630067 0.37583449490132786 1.0 ['AHCYL1|p.S296Ffs*26|1|0.35|ENSG00000168710|chr1:110016446-110016447|-/T|frameshift_variant'] 63486 14627 LPHLVQERL True PC9_epitope_Rep4 1103.6451278522302 1103.64402993586 64.192 2 -1.276830872472137 0.37583449490132786 1.0 ['ENST00000513693.1_1_5:7690761-7690995:+|nuORF'] 87783 19634 QVHRYRVNWW True PC9_epitope_Rep6 1442.73198579402 1442.7308899358602 88.182 2 -1.2768820305371242 0.3758573891354583 1.0 ['chr12:121950336-121951480|351|19.03|0.01|10.34|+|2|TE_info:L1MB5,L1MB5_dup6515,L1,LINE,donor,+,121949930,121950336|None,CFAP251|10', 'chr12:121950336-121954120|287|14.8|0.01|10.69|+|2|TE_info:L1MB5,L1MB5_dup6515,L1,LINE,donor,+,121949930,121950336|None,CFAP251|10'] 2406 5181 AEQLEKIYGSD True H1975_Epitope_Rep3 1251.59829679911 1251.5971899358601 25.024 2 -1.2769238677034538 0.3758573891354583 1.0 ['ENSG00000000419|ENST00000371588|DPM1', 'ENST00000466152.5_1_20:49557422-49575060:-|nuORF'] 86536 26236 QRAPKPLPRV True NCI_RA007_Epitope_Rep1 1160.71421047156 1160.71310993586 108.58 2 -1.2769292072149085 0.3758573891354583 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 136536 22537 YHRRVHTG True PC9_epitope_Rep3 1024.5314950823197 1024.53038993586 91.96 2 -1.2769424805531462 0.3758588649534196 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 66918 9099 LSYDMHLHH True PC9_epitope_Rep5 1151.5182130869503 1151.51656490379 39.945 3 -1.2769501807197599 0.3758588649534196 1.0 ['ENSG00000171532|ENST00000302584|NEUROD2'] 18195 8886 EIQTARPVHT True PC9_epitope_Rep2 1150.6094706194997 1150.60836993586 39.532 2 -1.2769627820022287 0.3758588649534196 1.0 ['ENSG00000165646|ENST00000644641|SLC18A2', 'nc|ENSG00000165646|Q05940-2|SLC18A2', 'SLC18A2|p.K248Rfs*37|1|0.12|ENSG00000165646|chr10:117255316-117255319|GGAA/-|frameshift_variant'] 72979 4461 NCTWARGP True PC9_epitope_Rep2 903.4021207055498 903.40102993586 22.519 2 -1.2769740860495458 0.3758588649534196 1.0 ['nc|ENSG00000292357|P15509-6|CSF2RA', 'nc|ENSG00000292357|P15509-3|CSF2RA', 'ENST00000478256.6_1_X:1407516-1407782:+|nuORF', 'nc|ENSG00000292357|P15509-8|CSF2RA', 'nc|ENSG00000292357|P15509-4|CSF2RA', 'nc|ENSG00000292357|P15509-5|CSF2RA', 'ENSG00000198223|ENST00000381529|CSF2RA', 'nc|ENSG00000292357|P15509-2|CSF2RA', 'nc|ENSG00000292357|P15509-7|CSF2RA'] 118782 7076 VEEADVDMEPN True H1975_Epitope_Rep2 1246.50234780894 1246.5012499358602 32.148 2 -1.2769775875068847 0.3758588649534196 1.0 ['ENSG00000108506|ENST00000251334|INTS2', 'nc|ENSG00000108506|Q9H0H0|INTS2'] 83994 10897 QEMFRFPM True H1975_Epitope_Rep2 1084.4834078013598 1084.48230993586 46.945 2 -1.2771540210067307 0.3758741258741259 1.0 ['ENSG00000120332|ENST00000239462|TNN', 'TNN|p.K611Efs*3|1|0.3|ENSG00000120332|chr1:175097655-175097656|-/A|frameshift_variant', 'TNN|p.P857Rfs*35|2|0.24|ENSG00000120332|chr1:175118743-175118743|C/-|frameshift_variant'] 19850 17388 ELVIRVQPN True PC9_epitope_Rep1 1066.6134933707797 1066.6123899358602 71.687 2 -1.2771734461678004 0.3758741258741259 1.0 ['ENSG00000160211|ENST00000393562|G6PD', 'nc|ENSG00000160211|P11413-3|G6PD', 'nc|ENSG00000160211|P11413-2|G6PD', 'ENST00000490651.1_1_X:153760401-153761015:-|nuORF'] 60496 19444 LINFLKEV True PC9_epitope_Rep5 974.5800679841799 974.57896993586 79.842 2 -1.277292417533326 0.37588938604855865 1.0 ['nc|ENSG00000135838|Q9BXD5-2|NPL', 'ENSG00000135838|ENST00000367553|NPL', 'ENST00000463899.5_1_1:182781291-182795122:+|nuORF', 'nc|ENSG00000135838|Q9BXD5-4|NPL', 'nc|ENSG00000135838|Q9BXD5-3|NPL'] 55944 10943 LDHMGCRP True PC9_epitope_Rep1 927.40549183383 927.40438993586 46.98 2 -1.2773029687635482 0.37588938604855865 1.0 ['nc|ENSG00000277399|Q6PRD1|GPR179', 'ENSG00000277399|ENST00000616987|GPR179'] 58055 12920 LERLLGEAP True PC9_epitope_Rep2 996.5603951687598 996.55928993586 54.992 2 -1.2773858680795493 0.3759092409442658 1.0 ['ENSG00000137507|ENST00000260061|LRRC32'] 106422 10654 SVTPRTFDS True PC9_epitope_Rep2 1008.48762415132 1008.48652993586 46.292 2 -1.2773963475320798 0.3759168704156479 1.0 ['ENST00000547785.2_1_14:20146241-20147198:+|nuORF'] 64251 9453 LQKWSLPYFRW True NCI_RA007_Epitope_Rep2 1522.8085047792197 1522.80740993586 41.382 2 -1.2774620837056714 0.37593056659128415 1.0 ['ENST00000491746.5_1_15:42120322-42127116:+|nuORF'] 81202 17702 PPLMLIIF True NCI_RA007_Epitope_Rep1 942.5612471159 942.56014993586 72.995 2 -1.2774719150986407 0.37593056659128415 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 60921 18238 LKWDRKKKRFV True PC9_epitope_Rep6 1502.9197865636997 1502.91814490379 82.794 3 -1.2774824461982583 0.37593056659128415 1.0 ['ENSG00000123064|ENST00000306014|DDX54', 'nc|ENSG00000123064|Q8TDD1-2|DDX54'] 42098 23675 IEELKRQNELR True PC9_epitope_Rep5 1426.78922588662 1426.78812993586 96.044 2 -1.277483872142323 0.37593056659128415 1.0 ['TRIP11|p.S1808Afs*25|2|0.16|ENSG00000100815|chr14:91975208-91975208|C/-|frameshift_variant', 'nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 71762 23613 MNCSHAFK True H1975_Epitope_Rep3 936.39459279696 936.39348993586 98.503 2 -1.2774846496566987 0.37593056659128415 1.0 ['ENST00000592182.5_1_2:179393182-179402334:+|nuORF', 'ENST00000431259.6_1_2:179396142-179402334:+|nuORF'] 73375 9255 NEQLGQIHYI True PC9_epitope_Rep4 1213.60913626633 1213.60750490379 43.198 3 -1.2775535888548595 0.37594582370701773 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1', 'ATP8B1|p.L459Hfs*8|1|0.19|ENSG00000081923|chr18:57688351-57688352|GA/-|frameshift_variant'] 26885 8188 FLFPCHVE True NCI_RA007_Epitope_Rep3 990.46332397978 990.46222993586 39.335 2 -1.2775856605314961 0.37594582370701773 1.0 ['ENST00000506187.1_1_17:48541946-48542066:-|nuORF'] 117782 10101 VALRPSAAAP True PC9_epitope_Rep1 951.5501648382299 951.54906993586 43.725 2 -1.2777619203679071 0.37599775085870746 1.0 ['ENSG00000087903|ENST00000303657|RFX2', 'nc|ENSG00000087903|P48378-2|RFX2', 'ENST00000586940.1_1_19:6027321-6110452:-|nuORF', 'ENST00000592172.5_1_19:6026246-6110452:-|nuORF'] 80541 23522 PLLRYLSHSEF True PC9_epitope_Rep4 1360.71393568804 1360.71282993586 98.782 2 -1.2777729700886868 0.37599775085870746 1.0 ['ENSG00000089154|ENST00000300648|GCN1', 'GCN1L1-CCND2|1|fusion'] 55319 8206 LARRYAAL True PC9_epitope_Rep3 932.5555845718397 932.55448993586 36.544 2 -1.2778108140345927 0.37600840952427517 1.0 ['ENSG00000145743|ENST00000542267|FBXL17'] 58017 21449 LERELKQLYLE True PC9_epitope_Rep1 1432.7925799315597 1432.79148993586 87.343 2 -1.2778905164620697 0.37600840952427517 1.0 ['ENSG00000138071|ENST00000260641|ACTR2', 'nc|ENSG00000138071|P61160-2|ACTR2'] 111058 14473 TLDSSAAP True H1975_Epitope_Rep3 760.36029837988 760.35974496793 61.03 1 -1.2778917720765646 0.37600840952427517 1.0 ['ENST00000533297.1_1_11:111896132-111933256:+|nuORF', 'ENSG00000150768|ENST00000280346|DLAT'] 110988 9921 TLDDQRAL True PC9_epitope_Rep1 930.4770594676199 930.47596993586 43.021 2 -1.2779147579524972 0.3760160365712051 1.0 ['ENSG00000183496|ENST00000329713|MEX3B', 'nc|ENSG00000183496|Q6ZN04-3|MEX3B'] 79670 5448 PHKC[Carbamidomethyl]CIYR True NCI_RA007_Epitope_Rep2 1075.5055405076998 1075.50444993586 25.811 2 -1.277962901744978 0.37602972451049893 1.0 ['ENST00000566833.1_1_15:43477651-43481519:+|nuORF'] 81944 5421 PSPSPTERAP True H1975_Epitope_Rep2 1037.5141732523298 1037.5130699358601 25.879 2 -1.2779636182129912 0.37602972451049893 1.0 ['nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-13|PML', 'ENSG00000140464|ENST00000268058|PML', 'nc|ENSG00000140464|P29590-14|PML', 'nc|ENSG00000140464|P29590-10|PML', 'nc|ENSG00000140464|P29590-12|PML', 'nc|ENSG00000140464|P29590-11|PML'] 12805 13957 DLITRQKQLF True PC9_epitope_Rep5 1260.7190210684796 1260.7179299358602 58.707 2 -1.2779797937614252 0.37602972451049893 1.0 ['nc|ENSG00000185787|Q9UBU8|MORF4L1', 'ENSG00000185787|ENST00000426013|MORF4L1', 'ENST00000560710.1_1_15:79184565-79186592:+|nuORF', 'nc|ENSG00000185787|Q9UBU8-3|MORF4L1', 'ENST00000447135.2_1_4:174537089-174537971:-|nuORF'] 43787 10664 IKDVQELRRII True NCI_RA007_Epitope_Rep5 1381.84053318349 1381.83889490379 47.656 3 -1.2780050070992366 0.37602972451049893 1.0 ['GRIA3|p.F202L|1|0.5|ENSG00000125675|chrX:123326123-123326123|C/A|missense_variant'] 100902 11443 SLSKTEPTQSQ True NCI_RA007_Epitope_Rep1 1204.59354577184 1204.59244993586 48.475 2 -1.2780383671365625 0.37602972451049893 1.0 ['ENSG00000167094|ENST00000373289|TTC16', 'ENST00000488285.1_1_9:130486913-130493681:+|nuORF', 'ENST00000489226.5_1_9:130492547-130493681:+|nuORF'] 81912 12163 PSLWAPAA True PC9_epitope_Rep4 811.4228390667898 811.42174993586 54.601 2 -1.278109585873558 0.3760449767782938 1.0 ['ENST00000467370.5_1_3:125824416-125834086:-|nuORF'] 36517 13125 GVKKLFIF True NCI_RA007_Epitope_Rep5 950.5953241254998 950.59422993586 57.162 2 -1.278123498084544 0.3760449767782938 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 63347 11251 LPELPSVTR True NCI_RA007_Epitope_Rep4 1010.5760452329 1010.57494993586 50.168 2 -1.2784045895658671 0.3761259334400704 1.0 ['ENSG00000059691|ENST00000263985|GATB'] 58569 11394 LFEFDTRVNP True H1975_Epitope_Rep2 1236.6138872935999 1236.61278993586 48.876 2 -1.2786640130541875 0.37615183438027033 1.0 ['ENST00000502774.1_1_4:154579740-154580577:+|nuORF'] 33006 10793 GIVRMTLS True PC9_epitope_Rep3 875.4898730807901 875.48876993586 46.479 2 -1.2786872611517406 0.37615183438027033 1.0 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF', 'ENST00000567789.1_1_16:1498340-1499128:-|nuORF'] 19585 13322 ELREYYRL True PC9_epitope_Rep5 1140.5927579262 1140.59110490379 56.256 3 -1.2786931774647718 0.37615183438027033 1.0 ['ENSG00000126216|ENST00000261965|TUBGCP3', 'nc|ENSG00000126216|Q96CW5-3|TUBGCP3', 'nc|ENSG00000126216|Q96CW5-2|TUBGCP3'] 126011 16509 VPAGSRLLL True PC9_epitope_Rep5 924.5756513100799 924.57454993586 68.501 2 -1.278704319348928 0.37615183438027033 1.0 ['ENSG00000186806|ENST00000335624|VSIG10L', 'nc|ENSG00000186806|Q86VR7-2|VSIG10L'] 23228 12377 EVQRLWQRPW True NCI_RA007_Epitope_Rep2 1396.7364024681196 1396.7353099358602 52.748 2 -1.2787478249050368 0.37615183438027033 1.0 ['ENSG00000181396|ENST00000313056|OGFOD3', 'nc|ENSG00000181396|Q6PK18-2|OGFOD3'] 47921 11377 IYWSDEHHPP True PC9_epitope_Rep1 1279.56218607391 1279.56108993586 48.643 2 -1.2788006670883818 0.3761823292191128 1.0 ['APCDD1|p.R272W|1|0.4|ENSG00000154856|chr18:10485501-10485501|C/T|missense_variant'] 131548 23432 VVVLALAQIR True NCI_RA007_Epitope_Rep4 1080.70191445236 1080.7008099358602 101.7 2 -1.2788375275338904 0.3761823292191128 1.0 ['ENSG00000049089|ENST00000372748|COL9A2'] 119899 19847 VEWCRKCFG True H1975_Epitope_Rep2 1126.5052058750998 1126.50355490379 82.325 3 -1.2788475259100904 0.3761823292191128 1.0 ['nc|ENSG00000137145|Q5VZ89|DENND4C', 'ENSG00000137145|ENST00000434457|DENND4C'] 109349 21174 TGIEDLKPNNT True PC9_epitope_Rep2 1200.5986311522797 1200.5969849037901 86.901 3 -1.2788936273180227 0.3761823292191128 1.0 ['DNMT3B|p.G347D|1|0.4|ENSG00000088305|chr20:32792744-32792744|G/A|missense_variant'] 57282 8164 LEGFYEIIPK True H1975_Epitope_Rep1 1207.64887581999 1207.6477699358602 36.344 2 -1.2789136346698213 0.3761853553622055 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 126623 5294 VPPVANGH True NCI_RA007_Epitope_Rep3 789.4133370122499 789.41222993586 27.833 2 -1.2789254596872186 0.3761853553622055 1.0 ['ENST00000467144.5_1_6:3298407-3324352:-|nuORF'] 20416 4944 EPNSRYTYKLE True NCI_RA007_Epitope_Rep2 1398.6779441021401 1398.6768499358602 23.852 2 -1.2789336277306773 0.376192978382804 1.0 ['USH2A|p.T4742Rfs*4|1|0.33|ENSG00000042781|chr1:215650712-215650712|G/-|frameshift_variant', 'ENSG00000042781|ENST00000307340|USH2A', 'nc|ENSG00000042781|O75445-3|USH2A', 'USH2A|p.R4120Afs*11|1|0.21|ENSG00000042781|chr1:215675553-215675553|G/-|frameshift_variant', 'USH2A|p.T4343Pfs*30|1|0.13|ENSG00000042781|chr1:215674885-215674885|G/-|frameshift_variant'] 41486 20146 ICEKHILWLKD True NCI_RA007_Epitope_Rep1 1396.7536923250398 1396.7525899358602 82.572 2 -1.2789745502823648 0.37619600415470156 1.0 ['ENSG00000171988|ENST00000399262|JMJD1C', 'nc|ENSG00000171988|Q15652-3|JMJD1C'] 86027 5162 QPKGASIP True NCI_RA007_Epitope_Rep1 796.4443027873599 796.44320993586 24.162 2 -1.2789961170923179 0.37619600415470156 1.0 ['ENST00000368457.2_1_1:154934069-154934114:-|nuORF'] 121744 21131 VGLSLHMTL True PC9_epitope_Rep2 969.5317378927701 969.53064993586 86.74 2 -1.2790381416330865 0.37620362676572655 1.0 ['ENST00000479543.1_3_11:35282443-35283261:-|nuORF'] 109426 25952 TGRGGPPP True H1975_Epitope_Rep3 737.3820368839699 737.3814849679301 108.09 1 -1.279132382854982 0.37620665216647525 1.0 ['ENST00000581080.1_1_17:38497513-38497723:-|nuORF'] 57352 11185 LEHFRATP True PC9_epitope_Rep3 969.50321464581 969.50210993586 48.027 2 -1.2791596084835997 0.37620665216647525 1.0 ['ENSG00000139797|ENST00000267291|RNF113B'] 54549 18692 LAAPPRRLRS True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 78.718 2 -1.2791846444768793 0.37620967741935485 1.0 ['nc|ENSG00000130475|O14526-3|FCHO1', 'nc|ENSG00000130475|O14526-2|FCHO1', 'ENSG00000130475|ENST00000596536|FCHO1'] 66334 7926 LSQPKEHSIV True PC9_epitope_Rep1 1136.61897267404 1136.61733490379 35.311 3 -1.2791887373508628 0.37620967741935485 1.0 ['ENSG00000179165|ENST00000454782|PXT1'] 121214 5343 VGGPEIEVGCS True PC9_epitope_Rep3 1045.4750108622898 1045.47390993586 25.629 2 -1.2792505339396796 0.37621729939761245 1.0 ['ENST00000509846.1_1_5:10258500-10261038:+|nuORF'] 37503 9034 GYGGGSGK True H1975_Epitope_Rep1 681.30820323737 681.30765496793 39.656 1 -1.2793184294173996 0.37622492118960926 1.0 ['ENSG00000171403|ENST00000246662|KRT9', 'CON__P35527'] 100504 7145 SLPLLDFPD True PC9_epitope_Rep1 1015.52261267771 1015.52150993586 32.294 2 -1.2793684895896806 0.376227945848199 1.0 ['ENST00000308527.5_1_15:75940532-75940874:+|nuORF'] 13206 13175 DLTEYRQVL True PC9_epitope_Rep4 1135.58733819259 1135.58624993586 58.575 2 -1.2794081454625061 0.376227945848199 1.0 ['ENSG00000167306|ENST00000285039|MYO5B', 'nc|ENSG00000167306|Q9ULV0-2|MYO5B', 'nc|ENSG00000167306|Q9ULV0-3|MYO5B', 'ENST00000431872.1_1_9:68357853-68358255:-|nuORF'] 42767 14192 IFGQLMML True NCI_RA007_Epitope_Rep5 951.4921815799099 951.49108993586 61.281 2 -1.2795549314245676 0.37623556723074103 1.0 ['ACER1|p.P42Q|2|0.21|ENSG00000167769|chr19:6312468-6312468|G/T|missense_variant'] 39494 12029 HPAEWRLAL True NCI_RA007_Epitope_Rep4 1091.58761297611 1091.58650993586 53.271 2 -1.2795889222580907 0.3762416156581021 1.0 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 23261 19210 EVRLRFLSYED True H1975_Epitope_Rep1 1425.7252286477299 1425.7241299358602 80.048 2 -1.2796304121156128 0.3762416156581021 1.0 ['ENSG00000159915|ENST00000683810|ZNF233'] 691 14866 AAVEVLTQVVH True H1975_Epitope_Rep1 1164.65027280232 1164.64916993586 62.416 2 -1.2796451901697696 0.3762416156581021 1.0 ['ENSG00000215421|ENST00000299687|ZNF407', 'ENST00000579200.1_1_18:72775002-72776421:+|nuORF'] 87280 22578 QSSVVRCRPLT True PC9_epitope_Rep4 1244.6659399497998 1244.66484993586 95.08 2 -1.2796566107895564 0.3762416156581021 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 73721 15643 NGVAKLTS True NCI_RA007_Epitope_Rep5 788.4392174069201 788.43812993586 66.878 2 -1.2797636631555547 0.376261453879047 1.0 ['ENST00000457253.1_1_6:28805954-28806077:-|nuORF'] 97324 18025 SFTTRSCPL True PC9_epitope_Rep1 1010.4855159763399 1010.48440993586 74.125 2 -1.2797742624020987 0.37626907429353335 1.0 ['KRT23|p.P54L|1|0.38|ENSG00000108244|chr17:40936443-40936443|G/A|missense_variant'] 45996 6429 ISTIFKSLWQ True NCI_RA007_Epitope_Rep2 1221.6757592741699 1221.67411490379 29.614 3 -1.2798552704576482 0.3762873373648525 1.0 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B'] 12616 11357 DLEAVRAAA True H1975_Epitope_Rep1 914.4821448480599 914.48104993586 48.662 2 -1.2798692403315186 0.3762873373648525 1.0 ['nc|ENSG00000042062|Q96MK2|RIPOR3', 'ENSG00000042062|ENST00000327979|RIPOR3'] 129742 18766 VTKKGSGS True PC9_epitope_Rep6 762.42356734278 762.42246993586 84.823 2 -1.2798916933555853 0.3762873373648525 1.0 ['ENST00000420610.1_1_Y:14088999-14090148:+|nuORF'] 92735 19320 RRKKYGIVL True PC9_epitope_Rep1 1131.72404687927 1131.72241490379 79.12 3 -1.2799046072218265 0.3762873373648525 1.0 ['ENSG00000125651|ENST00000394456|GTF2F1'] 12266 17234 DIRYDLFL True PC9_epitope_Rep1 1053.54949613189 1053.54838993586 71.108 2 -1.2799538748368198 0.3762949569976544 1.0 ['ENSG00000170044|ENST00000466937|ZPLD1', 'nc|ENSG00000170044|Q8TCW7-2|ZPLD1', 'chr3:102464251-102468964|131|37.53|0.21|7.51|+|1|ZPLD1,ZPLD1|1'] 90019 24439 RGERGRYR True H1975_Epitope_Rep3 1048.5638578397597 1048.5627699358602 101.73 2 -1.2799924515877115 0.3762979794277896 1.0 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1'] 61912 25414 LLLLKMLMI True PC9_epitope_Rep5 1086.69088138646 1086.69037496793 102.98 1 -1.27999537261592 0.3762979794277896 1.0 ['Tigger1_dup9834|chr14:19106484-19106883:-|1.044883763241324|0.2064126540684672|2.34|491.0|14|1|anti-sense', 'Tigger1_dup11946|chr22:15828868-15829349:-|1.0861641370613664|0.126984307270513|3.1|495.0|22|2|anti-sense'] 33031 13773 GIYTGLSAGL True PC9_epitope_Rep3 950.50729696674 950.50618993586 58.058 2 -1.280012381340574 0.37633003090680317 1.0 ['ENSG00000108528|ENST00000225665|SLC25A11'] 89301 17393 RELRRRWLKDQ True PC9_epitope_Rep1 1554.8855263132998 1554.88442993586 71.705 2 -1.2801871927914232 0.3763819156863464 1.0 ['nc|ENSG00000165264|O95139-2|NDUFB6', 'ENSG00000165264|ENST00000379847|NDUFB6'] 76885 25446 NVIYEKTIRK True PC9_epitope_Rep1 1262.7346711326197 1262.73356993586 102.86 2 -1.2802154495409301 0.3763819156863464 1.0 ['nc|ENSG00000124429|Q8WVV4-1|POF1B', 'ENSG00000124429|ENST00000262753|POF1B', 'nc|ENSG00000124429|Q8WVV4-3|POF1B'] 128841 19264 VSSIQDALP True PC9_epitope_Rep3 928.4865615221598 928.48546993586 79.32 2 -1.2802569732948104 0.3763849358073855 1.0 ['ENST00000569758.1_1_15:75646945-75647372:+|nuORF'] 84443 5052 QGKEASEQRI True PC9_epitope_Rep4 1144.58364979448 1144.5820049037902 26.069 3 -1.2802988783140294 0.3763849358073855 1.0 ['ENST00000472880.1_1_20:61467799-61467997:+|nuORF', 'ENST00000467819.5_1_20:61467799-61472081:+|nuORF'] 57650 11497 LELWVNYYVRW True NCI_RA007_Epitope_Rep1 1539.7874349814701 1539.78632993586 48.686 2 -1.2803456825077029 0.3763925535033714 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 69797 19961 LWRRRGALRFR True PC9_epitope_Rep6 1485.8905521240897 1485.88944993586 89.443 2 -1.2803967420741607 0.3764001710132535 1.0 ['chr15:53523322-53684228|265|18.12|0.04|8.74|-|0|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|111', 'chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|75', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|288|2|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|347|3|anti-sense', 'chr8:91197524-91200613|289|13.1|0.22|5.87|+|2|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|98', 'chr8:127290060-127311920|196|16.7|0.02|9.43|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|62', 'chr8:127290060-127311835|257|24.31|0.0|12.5|-|1|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311835,127315431|CASC8,None|62', 'chr6:83315413-83334213|140|10.1|0.0|19.95|-|0|TE_info:L1HS,L1HS_dup688,L1,LINE,donor,+,83334213,83339981|ME1,None|110', 'chr6:109250991-109254448|382|11.17|0.13|6.42|+|2|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|77', 'chr5:90822097-90965415|264|32.48|0.18|7.5|+|0|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|114', 'chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|121', 'chr14:58012150-58032884|335|10.01|0.03|8.51|-|2|TE_info:L1PA2,L1PA2_dup4307,L1,LINE,donor,+,58032884,58038561|ARMH4,None|93'] 121258 7595 VGGTSPREGVV True PC9_epitope_Rep6 1056.55637241748 1056.55526993586 38.492 2 -1.2805247660023718 0.3764077883370386 1.0 ['nc|ENSG00000138744|Q02083-2|NAAA', 'ENSG00000138744|ENST00000286733|NAAA'] 43958 8851 ILFIFSVM True NCI_RA007_Epitope_Rep2 968.5405116713199 968.53940993586 39.076 2 -1.2805610051238243 0.3764352372111203 1.0 ['MANEA|p.L22V|1|0.2|ENSG00000172469|chr6:95586503-95586503|C/G|missense_variant'] 30399 25218 GAFFSTLC True PC9_epitope_Rep2 844.3789256494799 844.37782993586 102.67 2 -1.280562668902109 0.3764352372111203 1.0 ['ENSG00000196208|ENST00000381486|GREB1'] 97141 7554 SFFFFFLALFY True H1975_Epitope_Rep3 1447.72164683743 1447.7200049037901 34.038 3 -1.2805863695850264 0.3764382557713448 1.0 ['ENST00000415128.6_1_6:142623466-142692070:+|nuORF'] 39041 11091 HKQVWWQEYQR True NCI_RA007_Epitope_Rep1 1586.77424452882 1586.7731499358601 47.14 2 -1.2806035059780594 0.3764382557713448 1.0 ['ENSG00000153237|ENST00000283233|CCDC148', 'CCDC148|p.Y421Ifs*29|1|0.22|ENSG00000153237|chr2:158220704-158220705|-/T|frameshift_variant', 'nc|ENSG00000153237|Q8NFR7-3|CCDC148', 'CCDC148|p.A314Cfs*14|1|0.43|ENSG00000153237|chr2:158309603-158309604|-/A|frameshift_variant', 'ENST00000451554.1_1_2:159145303-159312956:-|nuORF'] 16810 20361 EFLLRLSK True H1975_Epitope_Rep2 1004.6018660579199 1004.60076993586 84.377 2 -1.2806551097047119 0.37645808650193596 1.0 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3'] 38447 16851 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 70.065 2 -1.28084416880528 0.3765099605486546 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 99383 7593 SLEAFFLYGR True NCI_RA007_Epitope_Rep1 1201.6131590176099 1201.61152490379 33.528 3 -1.280862035871495 0.3765099605486546 1.0 ['ENSG00000082516|ENST00000285873|GEMIN5'] 78521 21884 PDKTMMDGSFS True PC9_epitope_Rep2 1214.4947603306998 1214.49366993586 89.653 2 -1.280882106434257 0.3765175757871852 1.0 ['nc|ENSG00000188992|Q6XZB0-8|LIPI', 'LIPI|p.L423*|1|0.25|ENSG00000188992|chr21:14144713-14144713|A/-|frameshift_variant', 'nc|ENSG00000188992|Q6XZB0-4|LIPI', 'nc|ENSG00000188992|Q6XZB0-5|LIPI', 'nc|ENSG00000188992|Q6XZB0-3|LIPI', 'ENSG00000188992|ENST00000681601|LIPI', 'nc|ENSG00000188992|Q6XZB0-2|LIPI'] 107625 7837 TAHATRERI True PC9_epitope_Rep3 1053.56794016069 1053.56684993586 35.134 2 -1.2810187937779283 0.3765618320610687 1.0 ['ENSG00000171786|ENST00000302101|NHLH1'] 65217 17589 LSEANRRLW True PC9_epitope_Rep2 1143.61489035311 1143.61378993586 72.935 2 -1.281022458028807 0.376569446480043 1.0 ['ENSG00000079482|ENST00000355520|OPHN1', 'ENST00000467444.1_1_X:67412641-67430091:-|nuORF'] 78772 20663 PEKDPEQP True NCI_RA007_Epitope_Rep3 938.4345259493 938.43342993586 90.005 2 -1.2810500978620516 0.3765770607130208 1.0 ['ENSG00000120451|ENST00000265909|SNX19', 'nc|ENSG00000120451|Q92543-2|SNX19', 'ENST00000527451.1_1_11:130773148-130776010:-|nuORF'] 46585 13864 ITRWRLTRERR True H1975_Epitope_Rep1 1541.9015107306097 1541.9004099358601 58.477 2 -1.2810777688775523 0.3765846747600088 1.0 ['ADAM9|p.P48R|1|0.16|ENSG00000168615|chr8:39007931-39007931|C/G|missense_variant'] 85771 6812 QLWELCLQWLR True NCI_RA007_Epitope_Rep2 1486.7754903987798 1486.7743899358602 31.113 2 -1.2812333100750743 0.3766167149085846 1.0 ['ENSG00000149054|ENST00000278319|ZNF215', 'nc|ENSG00000149054|Q9UL58-2|ZNF215'] 23404 10016 EVVGREPPPVP True NCI_RA007_Epitope_Rep5 1174.6346227381798 1174.63352993586 45.168 2 -1.2813096085920193 0.37661972863057364 1.0 ['MARCHF4|p.L110Cfs*49|1|0.32|ENSG00000144583|chr2:216369934-216369934|G/-|frameshift_variant', 'ENSG00000144583|ENST00000273067|MARCHF4'] 60908 8021 LKTGWESCL True NCI_RA007_Epitope_Rep2 1035.5059170677498 1035.50480993586 35.831 2 -1.2813357123213036 0.37661972863057364 1.0 ['ENST00000517719.5_1_8:37963213-37963649:+|nuORF', 'ENST00000428278.6_2_8:37963460-37963649:+|nuORF'] 108760 15460 TENYLEIEGM True H1975_Epitope_Rep2 1197.5223549775299 1197.5212499358602 64.624 2 -1.2813635616237684 0.3766273417845192 1.0 ['nc|ENSG00000064933|P54277-4|PMS1', 'nc|ENSG00000064933|P54277-2|PMS1', 'nc|ENSG00000064933|P54277-3|PMS1', 'ENSG00000064933|ENST00000441310|PMS1'] 88518 3296 RADFNRRRTN True NCI_RA007_Epitope_Rep5 1304.6810128503198 1304.6793749037902 18.202 3 -1.2816046639128522 0.3766990291262136 1.0 ['nc|ENSG00000159167|P52823-2|STC1', 'ENSG00000159167|ENST00000290271|STC1'] 42099 12095 IEELPKQL True PC9_epitope_Rep2 968.55424715916 968.55314993586 51.832 2 -1.2816444524676838 0.3766990291262136 1.0 ['nc|ENSG00000112851|Q96RT1-7|ERBIN', 'nc|ENSG00000112851|Q96RT1-6|ERBIN', 'nc|ENSG00000112851|Q96RT1-4|ERBIN', 'nc|ENSG00000112851|Q96RT1-5|ERBIN', 'nc|ENSG00000112851|Q96RT1-3|ERBIN', 'nc|ENSG00000112851|Q96RT1-9|ERBIN', 'nc|ENSG00000112851|Q96RT1-2|ERBIN', 'ENSG00000112851|ENST00000284037|ERBIN', 'nc|ENSG00000112851|Q96RT1-8|ERBIN', 'ERBIN|p.D635Mfs*50|1|0.47|ENSG00000112851|chr5:66048775-66048775|A/-|frameshift_variant', 'ERBIN|p.G1049Afs*21|1|0.18|ENSG00000112851|chr5:66054463-66054463|G/-|frameshift_variant', 'nc|ENSG00000033122|Q96NW7-2|LRRC7', 'nc|ENSG00000033122|Q96NW7|LRRC7', 'ENSG00000033122|ENST00000651989|LRRC7', 'ENST00000415775.2_1_1:70225872-70503822:+|nuORF', 'LRRC7|p.N814Kfs*21|1|0.12|ENSG00000033122|chr1:70038263-70038264|-/AA|frameshift_variant', 'nc|ENSG00000033122|Q96NW7-3|LRRC7'] 125296 20019 VLRSWWPRWWW True H1975_Epitope_Rep1 1656.8466216234397 1656.8449649037902 83.312 3 -1.281653478151051 0.3766990291262136 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 91217 21915 RLRLRKERVSD True PC9_epitope_Rep6 1426.84807817542 1426.84642490379 97.197 3 -1.281770855691315 0.37670204061694773 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 63948 15519 LPYQRRYRERR True H1975_Epitope_Rep3 1591.88077528603 1591.8796699358602 65.11 2 -1.281774536871205 0.37670204061694773 1.0 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'nc|ENSG00000179335|P49761-2|CLK3', 'ENST00000454830.6_1_15:74908152-74912599:+|nuORF'] 876 21414 ADLLLGIRELE True PC9_epitope_Rep5 1240.7027022979998 1240.70160993586 87.433 2 -1.2818438959511838 0.3767096522078937 1.0 ['DNAH17|p.R4303G|2|0.21|ENSG00000187775|chr17:78426465-78426465|G/C|missense_variant'] 111599 6017 TLNLPTEPSK True NCI_RA007_Epitope_Rep1 1098.5920892198599 1098.59098993586 27.449 2 -1.2819586927828013 0.3767324858653576 1.0 ['ENST00000536684.2_1_11:10530310-10530400:-|nuORF'] 45926 11556 ISRWFEVERRE True NCI_RA007_Epitope_Rep2 1505.77391017565 1505.77280993586 49.539 2 -1.281965189521438 0.3767324858653576 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 36663 20441 GVLRHLQVIF True PC9_epitope_Rep4 1180.7080624619598 1180.7069699358601 86.772 2 -1.281986403086263 0.3767324858653576 1.0 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant', 'nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'ENSG00000114374|ENST00000338981|USP9Y'] 64490 9905 LQVPLQAW True H1975_Epitope_Rep3 953.53345214493 953.53234993586 43.131 2 -1.2820305147601327 0.37675213675213676 1.0 ['nc|ENSG00000162006|Q96KJ4|MSLNL', 'MSLNL|p.A27Lfs*52|1|0.26|ENSG00000162006|chr16:780124-780124|G/-|frameshift_variant'] 64393 10914 LQQQVQEQQLL True PC9_epitope_Rep5 1353.7252286477299 1353.7241299358602 46.97 2 -1.2820515236136134 0.37675213675213676 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 64777 11709 LRSPNRDFLTH True PC9_epitope_Rep5 1354.7105816430999 1354.7094899358601 50.037 2 -1.2820813713343007 0.37675213675213676 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 97025 7075 SEVTHYKSSK True PC9_epitope_Rep2 1164.57750178488 1164.57640993586 32.61 2 -1.2821238723324127 0.37675213675213676 1.0 ['nc|ENSG00000160062|Q96BR9-2|ZBTB8A', 'ENSG00000160062|ENST00000373510|ZBTB8A'] 136262 16240 YGSKKDDYV True PC9_epitope_Rep5 1073.50293986229 1073.50184993586 67.456 2 -1.2821421880337178 0.37675213675213676 1.0 ['ENST00000496055.5_1_1:76251947-76253334:+|nuORF'] 44349 15343 IMLTIKPGEHG True PC9_epitope_Rep6 1194.6430792468998 1194.64144490379 71.147 3 -1.2821632679251556 0.37675213675213676 1.0 ['nc|ENSG00000065154|P04181-2|OAT', 'ENSG00000065154|ENST00000368845|OAT'] 4935 17997 ALHLNGNR True PC9_epitope_Rep2 893.48314790757 893.48204993586 74.529 2 -1.2821853734895916 0.37675213675213676 1.0 ['ENSG00000188937|ENST00000378220|NYX'] 38386 24197 HGGGKFKS True H1975_Epitope_Rep1 816.4242360491199 816.42312993586 100.36 2 -1.2821887583738834 0.37675213675213676 1.0 ['ENST00000304979.7_1_1:43124098-43124146:+|nuORF'] 131102 18113 VVMWRMVI True PC9_epitope_Rep4 1032.5612641992398 1032.5601699358601 77.738 2 -1.282190699052207 0.37675213675213676 1.0 ['AGBL2|p.G622V|2|0.14|ENSG00000165923|chr11:47682019-47682019|C/A|missense_variant'] 133626 20856 WKFRAMRKI True NCI_RA007_Epitope_Rep5 1234.7121022965798 1234.7110099358601 87.218 2 -1.2822102670839854 0.3767901837494658 1.0 ['ENST00000530606.1_1_10:77055306-77055468:+|nuORF'] 42757 19339 IFFFKDRFFWL True H1975_Epitope_Rep1 1564.8230922141997 1564.82198993586 80.563 2 -1.282268935550805 0.3767901837494658 1.0 ['ENSG00000262406|ENST00000571244|MMP12'] 60840 16751 LKKYKIAC True NCI_RA007_Epitope_Rep4 965.5732087819299 965.57210993586 72.616 2 -1.282295011955669 0.3767901837494658 1.0 ['ENSG00000154269|ENST00000357639|ENPP3'] 69746 22059 LWKGQVPLIGC True PC9_epitope_Rep6 1212.6689000719198 1212.66724490379 97.783 3 -1.2823251318869833 0.3767901837494658 1.0 ['ENST00000377575.2_1_6:26545813-26545903:+|nuORF'] 111930 22511 TLRWRKRWRWR True PC9_epitope_Rep5 1698.9807641108196 1698.97966993586 91.592 2 -1.2823281833921694 0.3767901837494658 1.0 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 41724 6612 IDNLDTRLPRI True NCI_RA007_Epitope_Rep3 1324.74629844548 1324.7452099358602 33.066 2 -1.2823961544179592 0.376791600537175 1.0 ['ENSG00000152455|ENST00000354919|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-2|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-3|SUV39H2'] 92401 12253 RQRRATPPA True H1975_Epitope_Rep1 1051.5999089953098 1051.5988099358601 52.154 2 -1.2824013474792353 0.376791600537175 1.0 ['ENST00000608937.5_1_9:137000676-137000952:+|nuORF'] 36499 8954 GVKGAKIK True PC9_epitope_Rep1 799.5279728416699 799.52686993586 39.284 2 -1.282423602482378 0.376791600537175 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 14412 2784 DTHLWYFVIP True H1975_Epitope_Rep2 1289.6444591458899 1289.64280490379 14.74 3 -1.2824570780422087 0.376791600537175 1.0 ['ENSG00000146802|ENST00000312814|TMEM168'] 35329 5045 GSVPSIRRNFH True PC9_epitope_Rep3 1268.67380221156 1268.67214490379 24.493 3 -1.2824665257851533 0.376791600537175 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 59461 11090 LGNLRPPV True PC9_epitope_Rep1 864.51813643396 864.51702993586 47.545 2 -1.2825032718954417 0.37681141726996376 1.0 ['ENST00000519935.1_1_7:27209203-27211037:+|nuORF'] 54869 7991 LAGHGFAV True NCI_RA007_Epitope_Rep5 770.4075233558199 770.40642993586 37.426 2 -1.2825933591609666 0.3768678581892763 1.0 ['ENSG00000205669|ENST00000645972|ACOT6'] 16931 9217 EGEASHPPKPQ True H1975_Epitope_Rep1 1175.55710069347 1175.5560099358602 40.362 2 -1.2826458735751671 0.3768708645652758 1.0 ['ENST00000576329.1_1_17:4719175-4720106:+|nuORF'] 21739 7787 ESASPPPK True PC9_epitope_Rep1 811.40758292547 811.40648993586 34.776 2 -1.2827101363824975 0.3768708645652758 1.0 ['nc|ENSG00000138182|Q96Q89-4|KIF20B'] 82564 19239 PVGQLWVELLR True H1975_Epitope_Rep1 1308.7554065772 1308.7543099358602 80.165 2 -1.2827928805351334 0.37689067936275406 1.0 ['nc|ENSG00000083223|Q5VYS8-2|TUT7', 'nc|ENSG00000083223|Q5VYS8-4|TUT7', 'nc|ENSG00000083223|Q5VYS8-6|TUT7', 'ENSG00000083223|ENST00000375963|TUT7'] 120198 18595 VFLSTRQVL True PC9_epitope_Rep6 1061.62332977849 1061.62222993586 84.169 2 -1.2828100469199049 0.376910493676449 1.0 ['ENST00000531310.1_1_8:145745109-145745647:+|nuORF', 'ENSG00000160959|ENST00000292524|LRRC14'] 29489 25222 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 103.62 3 -1.2828387917601247 0.3769181000280772 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 68625 11110 LVAEKQLTK True H1975_Epitope_Rep3 1028.62299542532 1028.62188993586 47.829 2 -1.282906575780928 0.3769379135232794 1.0 ['ENST00000599493.1_1_18:34647308-34664196:+|nuORF', 'nc|ENSG00000150477|Q86T90-3|KIAA1328', 'ENST00000590617.5_1_18:34415331-34802187:+|nuORF'] 31843 8282 GEPANPVD True PC9_epitope_Rep2 797.35554735261 797.35444993586 37.217 2 -1.2829951019247114 0.37695772653474774 1.0 ['ENSG00000112983|ENST00000254900|BRD8'] 73405 17024 NESAVIVAP True PC9_epitope_Rep3 898.4759968384599 898.47488993586 70.639 2 -1.2831152208628807 0.3770263671875 1.0 ['ENSG00000137628|ENST00000393743|DDX60', 'ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 58077 6129 LERQSSGL True PC9_epitope_Rep2 888.4664947839199 888.46538993586 28.97 2 -1.283162954874412 0.3770461786355147 1.0 ['ENST00000579889.1_1_17:46128265-46128442:+|nuORF'] 128396 11552 VSDTEILKVA True PC9_epitope_Rep4 1073.5968402471299 1073.59574993586 52.195 2 -1.283229548794141 0.37706598959986326 1.0 ['nc|ENSG00000112584|Q96EK7-2|FAM120B', 'ENSG00000112584|ENST00000476287|FAM120B'] 62847 16863 LMKLLPPPI True NCI_RA007_Epitope_Rep3 1020.6405600657599 1020.63946993586 74.203 2 -1.2833258068505307 0.3770918012376872 1.0 ['ENSG00000176102|ENST00000323959|CSTF3'] 130012 9115 VTPNHSAF True PC9_epitope_Rep5 871.41881631551 871.41770993586 40.006 2 -1.2833538666587472 0.3770918012376872 1.0 ['nc|ENSG00000042445|Q6NUM9-2|RETSAT', 'ENSG00000042445|ENST00000295802|RETSAT'] 13824 8322 DQVVAVFVVTF True H1975_Epitope_Rep3 1222.65977485686 1222.6586699358602 36.993 2 -1.2833698546661594 0.3770918012376872 1.0 ['ENSG00000257093|ENST00000536163|DENND11'] 78493 11796 PDFKYNFENAS True H1975_Epitope_Rep2 1330.5829810881398 1330.58188993586 50.447 2 -1.283387375430521 0.3770918012376872 1.0 ['ENST00000491086.5_1_3:149531035-149619859:+|nuORF'] 63733 14836 LPRFPRMLP True PC9_epitope_Rep4 1125.64810505769 1125.64645490379 65.006 3 -1.2834153298084852 0.3770918012376872 1.0 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14', 'ENSG00000121101|ENST00000349033|TEX14'] 93553 25034 RSREKRRRRRR True PC9_epitope_Rep1 1610.9890373787396 1610.9879499358601 101.21 2 -1.2834624040914604 0.3771100072011815 1.0 ['ENSG00000126461|ENST00000360565|SCAF1'] 131769 20860 VYAEKRRKVS True NCI_RA007_Epitope_Rep5 1234.7146043943799 1234.71295490379 87.234 3 -1.2834650547365387 0.3771100072011815 1.0 ['ENST00000519204.5_1_5:167690101-167690218:+|nuORF'] 6413 17032 APSFAPSSSV True PC9_epitope_Rep3 948.45526139388 948.45471496793 70.669 1 -1.283471434801528 0.3771100072011815 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 3326 3649 AGGVDNLHV True NCI_RA007_Epitope_Rep4 880.44028003608 880.43918993586 20.125 2 -1.2834820086975458 0.3771100072011815 1.0 ['nc|ENSG00000148700|Q9UEY8-2|ADD3', 'ENSG00000148700|ENST00000356080|ADD3'] 3316 6283 AGGQEAFK True PC9_epitope_Rep3 806.3922672144998 806.39116993586 29.201 2 -1.2835328661466403 0.3771252120635153 1.0 ['ENSG00000146038|ENST00000378454|DCDC2'] 112449 4994 TNPQLVEI True PC9_epitope_Rep3 912.4916469025999 912.49054993586 24.301 2 -1.2835682458322843 0.3771252120635153 1.0 ['ENST00000532940.5_1_8:144921262-144922356:-|nuORF'] 100044 13393 SLKLRYEEA True PC9_epitope_Rep1 1107.5924235730301 1107.5913299358601 56.376 2 -1.2837178318299445 0.37713281421632044 1.0 ['ENSG00000138592|ENST00000307179|USP8'] 62848 16968 LMKLLPPPI True NCI_RA007_Epitope_Rep3 1020.6405600657599 1020.63946993586 74.607 2 -1.2838409072858155 0.3771692172512265 1.0 ['ENSG00000176102|ENST00000323959|CSTF3'] 166 11340 AADTVKEL True NCI_RA007_Epitope_Rep3 845.4494477374499 845.44834993586 51.721 2 -1.2838436401558726 0.3771692172512265 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.R772Pfs*13|1|0.15|ENSG00000183856|chr1:156544452-156544462|CCTATAACCCC/-|frameshift_variant'] 65642 6859 LSGRFLEE True NCI_RA007_Epitope_Rep3 949.4868958753299 949.48578993586 34.09 2 -1.2838671903665568 0.3771692172512265 1.0 ['SUCO|p.Y935F|1|0.1|ENSG00000094975|chr1:172589905-172589905|A/T|missense_variant'] 74307 16613 NILDIVRPP True PC9_epitope_Rep3 1035.6076797143498 1035.60658993586 69.037 2 -1.2838682520737315 0.3771692172512265 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 81102 16606 PPGKVVTV True PC9_epitope_Rep4 795.48543932335 795.48434993586 71.85 2 -1.2839349196418197 0.3771692172512265 1.0 ['ENSG00000007545|ENST00000397412|CRAMP1'] 39425 19947 HMGTSTMS True H1975_Epitope_Rep2 850.3313238340601 850.33022993586 82.71 2 -1.2839495879071665 0.3771692172512265 1.0 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13'] 48025 21656 KAKVRQWRAH True H1975_Epitope_Rep2 1278.7421565549 1278.74050490379 89.587 3 -1.2839983314089114 0.3771692172512265 1.0 ['ENSG00000153237|ENST00000283233|CCDC148', 'CCDC148|p.Y421Ifs*29|1|0.22|ENSG00000153237|chr2:158220704-158220705|-/T|frameshift_variant', 'nc|ENSG00000153237|Q8NFR7-2|CCDC148'] 8647 13647 AVAQFKKY True PC9_epitope_Rep4 953.5334521449299 953.53234993586 60.385 2 -1.2840343315431564 0.3771692172512265 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 35206 11662 GSGCGRQA True H1975_Epitope_Rep1 734.3129713479799 734.31242496793 49.847 1 -1.284061576862718 0.3771736079756922 1.0 ['ENST00000429490.5_1_10:52383609-52383699:-|nuORF'] 77653 10515 NYYSTLSFT True PC9_epitope_Rep4 1094.49204082542 1094.49094993586 48.168 2 -1.284114032338582 0.3771736079756922 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 89962 1155 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 6.1064 3 -1.2841186957840576 0.3771736079756922 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 47804 10818 IYRFTQEDLRK True NCI_RA007_Epitope_Rep2 1467.78341223019 1467.7823099358602 46.682 2 -1.2841281511876044 0.3771736079756922 1.0 ['ENSG00000173546|ENST00000308508|CSPG4'] 124525 12378 VLGAAGAA True NCI_RA007_Epitope_Rep2 628.3544251538 628.3538749679301 52.753 1 -1.284154144325274 0.3771736079756922 1.0 ['nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2'] 79292 8193 PGIDFRGGPA True PC9_epitope_Rep4 985.4981292653698 985.49702993586 38.973 2 -1.2841553238823258 0.3771736079756922 1.0 ['ENSG00000198597|ENST00000355537|ZNF536'] 70567 26317 LYWQLQLFGN True NCI_RA007_Epitope_Rep5 1280.6553581827595 1280.6542699358602 108.82 2 -1.2841564546647477 0.3771736079756922 1.0 ['ENSG00000187527|ENST00000342358|ATP13A5'] 120831 15912 VGDLSAAH True PC9_epitope_Rep3 768.3766171503601 768.37552993586 66.354 2 -1.2841765416612836 0.3771842053885201 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2', 'NID2|p.A1169Sfs*8|1|0.21|ENSG00000087303|chr14:52011595-52011599|CCAGC/-|frameshift_variant', 'NID2|p.P437Qfs*22|1|0.37|ENSG00000087303|chr14:52053698-52053698|G/-|frameshift_variant'] 139615 12196 YTRPSYAQYYP True H1975_Epitope_Rep2 1407.64591569787 1407.6448099358602 51.995 2 -1.284227041056797 0.3771842053885201 1.0 ['ENSG00000164080|ENST00000684192|RAD54L2', 'ENST00000461680.1_1_3:51673299-51697433:+|nuORF', 'ENST00000487093.5_1_3:51669772-51697433:+|nuORF'] 5548 12108 ANIGPLLV True PC9_epitope_Rep5 795.48543932335 795.48434993586 51.564 2 -1.2842462103827739 0.3771842053885201 1.0 ['nc|ENSG00000101276|Q9NQ40-2|SLC52A3', 'ENSG00000101276|ENST00000645534|SLC52A3'] 113338 19645 TQKRALGKS True H1975_Epitope_Rep1 987.5825275956698 987.58142993586 81.779 2 -1.2843176158478653 0.3772116065109696 1.0 ['ENST00000274071.6_1_4:157892080-157892299:-|nuORF'] 102001 10804 SPPARPLPV True H1975_Epitope_Rep1 932.5443511817999 932.54324993586 46.521 2 -1.2843819975556192 0.3772116065109696 1.0 ['ENST00000490861.5_1_1:44435799-44436893:+|nuORF', 'nc|ENSG00000132768|Q9BQC3-2|DPH2', 'ENSG00000132768|ENST00000255108|DPH2'] 16915 6464 EGDHIGLT True NCI_RA007_Epitope_Rep5 840.39774651776 840.39664993586 31.527 2 -1.2845179161513387 0.37728137809877027 1.0 ['NEURL4|p.A1044Gfs*3|1|0.11|ENSG00000215041|chr17:7321428-7321429|-/C|frameshift_variant', 'nc|ENSG00000215041|Q96JN8-2|NEURL4', 'ENSG00000215041|ENST00000399464|NEURL4', 'ENST00000571243.1_1_17:7228777-7229792:-|nuORF'] 36126 3864 GVEQRWETMP True PC9_epitope_Rep2 1231.56555720219 1231.5639149037902 20.129 3 -1.2846135153329894 0.37728137809877027 1.0 ['ENST00000594286.5_1_19:53625810-53636169:-|nuORF'] 86032 991 QPLGFYKQYF True H1975_Epitope_Rep1 1289.64445914589 1289.64280490379 5.1639 3 -1.284620095746912 0.37728137809877027 1.0 ['ENST00000471538.1_1_1:16200123-16200204:+|nuORF'] 15406 10309 EALTLKYKL True NCI_RA007_Epitope_Rep4 1077.64339651673 1077.6422899358602 46.509 2 -1.284649070228793 0.37728137809877027 1.0 ['ENSG00000182934|ENST00000332118|SRPRA', 'ENST00000528744.5_1_11:126137442-126138699:-|nuORF'] 12617 4474 DLEAYIYVFSQ True NCI_RA007_Epitope_Rep2 1346.6394333351 1346.6383299358602 22.036 2 -1.2846607066218656 0.37728137809877027 1.0 ['ENSG00000172031|ENST00000370383|EPHX4'] 90030 23143 RGGGGGGA True H1975_Epitope_Rep2 587.2775718154301 587.2770249679301 95.478 1 -1.2847043180647304 0.37728137809877027 1.0 ['ENSG00000079313|ENST00000170168|REXO1', 'ENST00000358731.8_2_5:70751498-70751573:+|nuORF', 'ENSG00000130226|ENST00000377770|DPP6', 'ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'ENSG00000163013|ENST00000520530|FBXO41', 'ENSG00000169840|ENST00000302945|GSX1'] 98655 10500 SIPSCDLSGF True H1975_Epitope_Rep2 1024.4535471417198 1024.4524499358602 45.406 2 -1.2847121830732764 0.37728137809877027 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2', 'TENM2|p.I1030Sfs*36|1|0.36|ENSG00000145934|chr5:168199038-168199044|CAATCAT/-|frameshift_variant'] 103888 19685 SRLKQPLQVR True H1975_Epitope_Rep1 1223.74623887583 1223.7451499358601 81.943 2 -1.284715065604256 0.37728137809877027 1.0 ['ENST00000475971.5_1_7:892397-892598:+|nuORF'] 60927 9789 LKWRKIQYMAR True NCI_RA007_Epitope_Rep1 1491.84965839855 1491.84856993586 42.08 2 -1.2848182159718862 0.37728137809877027 1.0 ['ENSG00000111801|ENST00000244519|BTN3A3'] 81470 7335 PQNTYTVTN True H1975_Epitope_Rep3 1036.48253877088 1036.48197496793 33.19 1 -1.2848840469839509 0.37728137809877027 1.0 ['OR11L1|p.S7Y|1|0.22|ENSG00000197591|chr1:247841877-247841877|G/T|missense_variant'] 38339 11230 HGAGGGWG True NCI_RA007_Epitope_Rep5 697.29322187957 697.2926749679301 49.834 1 -1.284908922988778 0.37728137809877027 1.0 ['ENST00000582754.5_1_17:39081604-39092927:-|nuORF', 'ENSG00000108244|ENST00000209718|KRT23', 'CON__Q9C075'] 61765 16954 LLKEREIL True PC9_epitope_Rep6 1012.6280808057599 1012.62698993586 77.758 2 -1.2849531419950362 0.37728137809877027 1.0 ['nc|ENSG00000196632|Q9BYP7-3|WNK3', 'nc|ENSG00000196632|Q9BYP7-4|WNK3', 'nc|ENSG00000196632|Q9BYP7-2|WNK3', 'ENSG00000196632|ENST00000354646|WNK3'] 88102 7046 QVWITSEWVK True NCI_RA007_Epitope_Rep1 1274.66592286646 1274.66428490379 31.403 3 -1.2849790912319463 0.37728137809877027 1.0 ['nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 131527 11674 VVVGKVLLI True NCI_RA007_Epitope_Rep5 938.6528390016199 938.65174993586 51.558 2 -1.2850249817115502 0.37728137809877027 1.0 ['nc|ENSG00000211452|P49895-8|DIO1', 'nc|ENSG00000211452|P49895-9|DIO1', 'nc|ENSG00000211452|P49895-3|DIO1', 'nc|ENSG00000211452|P49895-7|DIO1', 'nc|ENSG00000211452|P49895-5|DIO1', 'nc|ENSG00000211452|P49895-2|DIO1', 'nc|ENSG00000211452|P49895-4|DIO1', 'ENSG00000211452|ENST00000361921|DIO1'] 15929 5764 EDSGVRMT True NCI_RA007_Epitope_Rep1 893.3912812383301 893.39018993586 26.476 2 -1.2850616357125053 0.3772843723313407 1.0 ['nc|ENSG00000099385|Q8WUZ0-2|BCL7C'] 82186 9394 PTEVDTVETPI True NCI_RA007_Epitope_Rep1 1199.59214878951 1199.5910499358602 40.533 2 -1.2850720705016672 0.3772843723313407 1.0 ['ENSG00000109991|ENST00000263314|P2RX3'] 128034 22250 VRRGVTTK True PC9_epitope_Rep1 915.56139822827 915.56084496793 90.402 1 -1.2851766190618568 0.37734836285560924 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF', 'ENST00000488064.5_1_18:6961676-6965410:-|nuORF'] 57259 16057 LEFWRKFGIG True NCI_RA007_Epitope_Rep1 1251.6764279805097 1251.6753299358602 66.562 2 -1.2852454955258992 0.37734836285560924 1.0 ['nc|ENSG00000183032|Q9BQT8-2|SLC25A21', 'ENSG00000183032|ENST00000331299|SLC25A21'] 37619 4310 GYWYFMPPPP True H1975_Epitope_Rep2 1253.5579526406098 1253.55631490379 21.689 3 -1.2853175050264063 0.37736654630623595 1.0 ['nc|ENSG00000119397|Q7Z7A1-2|CNTRL', 'nc|ENSG00000119397|Q7Z7A1-5|CNTRL', 'ENSG00000119397|ENST00000373855|CNTRL', 'ENST00000431571.5_1_9:123906333-123914781:+|nuORF', 'ENST00000373851.6_1_9:123874787-123912836:+|nuORF'] 12702 6257 DLFIHIFREWY True NCI_RA007_Epitope_Rep1 1537.7717849173298 1537.7701349037898 28.371 3 -1.285351529803085 0.37736654630623595 1.0 ['ENST00000416464.6_1_17:15587015-15587114:-|nuORF'] 71669 22739 MLTLVFLVL True PC9_epitope_Rep5 1047.64022571259 1047.6391299358602 92.47 2 -1.2853793727057632 0.37736654630623595 1.0 ['ENST00000504941.1_1_5:106762801-107006392:-|nuORF', 'ENSG00000184349|ENST00000333274|EFNA5'] 75111 23570 NMTWKIKLR True NCI_RA007_Epitope_Rep4 1188.6801334619597 1188.6790299358602 102.26 2 -1.2853891519229574 0.37736654630623595 1.0 ['ENSG00000226761|ENST00000533467|TAS2R46', 'nc|ENSG00000255374|P59539|TAS2R45'] 107430 19356 SYTWEAVDTKN True PC9_epitope_Rep3 1312.59354577184 1312.59190490379 79.675 3 -1.2854604892007622 0.37741372790592714 1.0 ['ENSG00000197081|ENST00000356956|IGF2R', 'IGF2R|p.P1413Rfs*23|1|0.28|ENSG00000197081|chr6:160068368-160068368|C/-|frameshift_variant'] 115173 12303 TVALAKGF True NCI_RA007_Epitope_Rep2 805.46978925921 805.46868993586 52.459 2 -1.2854841195726592 0.37741372790592714 1.0 ['LSM14A-GPI|2|fusion'] 12948 10603 DLNYSYAW True PC9_epitope_Rep2 1030.4396113297398 1030.43850993586 46.099 2 -1.2855268667030741 0.37741372790592714 1.0 ['ENSG00000175283|ENST00000372586|DOLK'] 29161 18624 FTVTEQKV True PC9_epitope_Rep4 950.5072969667399 950.50618993586 79.714 2 -1.2856104093457175 0.3774563019162509 1.0 ['ENST00000498374.1_1_6:16739996-16761588:-|nuORF'] 125069 26274 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 108.73 3 -1.2856473590831807 0.3774563019162509 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 25716 17879 FFKAKWEKRFH True NCI_RA007_Epitope_Rep1 1522.8197381692598 1522.81864993586 73.684 2 -1.2856573751693932 0.3774563019162509 1.0 ['SERPINA9|p.P215R|1|0.09|ENSG00000170054|chr14:94467367-94467367|G/C|missense_variant'] 91592 7758 RPARARGWCP True PC9_epitope_Rep1 1168.60361447676 1168.60250993586 34.662 2 -1.285674540066495 0.3774563019162509 1.0 ['ENST00000489112.5_1_3:98451315-98475259:+|nuORF'] 81457 8210 PQKYYWWFFQT True NCI_RA007_Epitope_Rep2 1592.7452358163196 1592.7441299358602 36.572 2 -1.2857525003938797 0.3774714886869549 1.0 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1'] 67916 12168 LTLDTWEP True H1975_Epitope_Rep2 973.47566248529 973.47511496793 51.887 1 -1.2857997505401064 0.3774714886869549 1.0 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000475905.5_1_3:195016371-195022834:-|nuORF'] 73194 7557 NEERQDTDMQ True H1975_Epitope_Rep1 1264.498993764 1264.49788993586 34.06 2 -1.2858555005539267 0.3774790817944527 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000492674.1_1_7:99809286-99811635:+|nuORF'] 14667 8865 DVNGTLVSIY True H1975_Epitope_Rep3 1079.54989005471 1079.5487899358602 39.101 2 -1.2859386103729447 0.3774820705469093 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 4353 21083 AIPESSPPSGI True PC9_epitope_Rep6 1053.5342399905699 1053.5331499358601 93.921 2 -1.2859537949021678 0.3774820705469093 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 71504 21256 MKMLRKVTL True PC9_epitope_Rep6 1118.66679189694 1118.6656899358602 94.614 2 -1.2860186429473972 0.3775140567637122 1.0 ['ENST00000355112.7_1_15:91293243-91293270:+|nuORF'] 75176 5329 NNLRKELSQYI True NCI_RA007_Epitope_Rep4 1376.7412130650398 1376.7401099358601 27.063 2 -1.2860436863049014 0.37752164898158314 1.0 ['ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 34009 24493 GNIRRARKRKY True PC9_epitope_Rep4 1416.8538322621998 1416.85272993586 102.7 2 -1.286225622286974 0.37759022331719333 1.0 ['ENSG00000166707|ENST00000650639|ZCCHC18'] 137918 13057 YPQEEYFDS True H1975_Epitope_Rep2 1176.46113461996 1176.4600299358601 55.347 2 -1.2863861695580203 0.3776309050557276 1.0 ['PCDH11X|p.R1097S|1|0.7|ENSG00000102290|chrX:92387879-92387879|C/A|missense_variant'] 25226 11518 FEAWYLGRL True PC9_epitope_Rep3 1153.5920296502097 1153.5903749037902 49.308 3 -1.2863917984099515 0.3776309050557276 1.0 ['ENST00000525340.5_1_11:62340970-62341174:-|nuORF'] 5250 5646 ALQPLRSEGGP True H1975_Epitope_Rep3 1123.59857158263 1123.59746993586 26.748 2 -1.2864176766730644 0.3776309050557276 1.0 ['nc|ENSG00000099904|Q9ULC8-2|ZDHHC8', 'ENSG00000099904|ENST00000334554|ZDHHC8', 'nc|ENSG00000099904|Q9ULC8-3|ZDHHC8'] 104941 8007 STGYDPVKL True H1975_Epitope_Rep3 978.5022115862998 978.5016649679301 35.77 1 -1.2864222263912206 0.3776309050557276 1.0 ['ENSG00000126261|ENST00000246548|UBA2', 'nc|ENSG00000126261|Q9UBT2-2|UBA2'] 64635 25201 LRFRRKRRHH True PC9_epitope_Rep2 1460.88138442272 1460.87974490379 102.6 3 -1.2864462226277529 0.3776309050557276 1.0 ['nc|ENSG00000145888|P23415|GLRA1', 'ENSG00000145888|ENST00000274576|GLRA1'] 133144 17595 WCWEGRGQTL True PC9_epitope_Rep5 1234.5553268716596 1234.5542299358601 72.687 2 -1.2864610189799064 0.3776309050557276 1.0 ['ENSG00000158201|ENST00000289119|ABHD3', 'ENST00000577928.5_1_18:19263865-19284533:-|nuORF', 'ENST00000579875.5_1_18:19244061-19284599:-|nuORF', 'ENST00000579982.1_1_18:19282269-19284734:-|nuORF', 'ENST00000578270.5_1_18:19244077-19283696:-|nuORF'] 90656 24726 RKKRTFPQILA True NCI_RA007_Epitope_Rep1 1356.8353882334 1356.8342899358602 102.38 2 -1.286464855503849 0.3776309050557276 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion'] 19509 11529 ELQKYLNFDPR True PC9_epitope_Rep1 1421.7303140281697 1421.72866490379 49.226 3 -1.286464874990967 0.3776309050557276 1.0 ['ENSG00000131375|ENST00000253693|CAPN7'] 118358 5399 VDGKQVKAEMP True NCI_RA007_Epitope_Rep2 1200.6172584218798 1200.6156149037902 25.619 3 -1.2865293778637188 0.3776309050557276 1.0 ['ENST00000478447.1_1_1:113246211-113247744:-|nuORF'] 94164 13238 RWLEKEERFLK True NCI_RA007_Epitope_Rep1 1532.8463468399198 1532.84470490379 55.491 3 -1.2865586101741 0.3776309050557276 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 58372 14751 LEVKLGKRP True H1975_Epitope_Rep2 1038.6549642599398 1038.65386993586 61.9 2 -1.286567572817275 0.3776309050557276 1.0 ['ENSG00000140044|ENST00000651602|JDP2', 'nc|ENSG00000140044|Q8WYK2-2|JDP2'] 60537 11552 LIPPEDTR True H1975_Epitope_Rep3 939.50254593947 939.50144993586 49.562 2 -1.2866141510773728 0.3776309050557276 1.0 ['nc|ENSG00000183853|Q96J84-2|KIRREL1', 'ENSG00000183853|ENST00000359209|KIRREL1', 'KIRREL-PYHIN1|2|fusion', 'KIRREL-PYHIN1|1|fusion'] 32075 12713 GEWGSHSV True H1975_Epitope_Rep2 857.3667807426499 857.36568993586 54.001 2 -1.286616806179605 0.3776309050557276 1.0 ['nc|ENSG00000164659|A8MWY0-3|ELAPOR2', 'ENSG00000164659|ENST00000450689|ELAPOR2', 'ELAPOR2|p.M249I|1|0.18|ENSG00000164659|chr7:86940110-86940110|C/T|missense_variant'] 36918 4706 GVQWPNLC True PC9_epitope_Rep1 915.4272728242299 915.42616993586 22.974 2 -1.2866600186928239 0.3776309050557276 1.0 ['ENST00000589829.5_1_18:11905221-11905871:-|nuORF'] 82321 13028 PTPWLPSF True NCI_RA007_Epitope_Rep5 943.4803539429099 943.47924993586 56.789 2 -1.2866782267299137 0.3776309050557276 1.0 ['ENST00000474961.5_1_6:31498060-31498156:-|nuORF'] 49101 22205 KGAKGATG True PC9_epitope_Rep2 688.3867879112399 688.38623496793 90.894 1 -1.2867355969604868 0.377638494274879 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2'] 138499 23649 YRIGKVTS True PC9_epitope_Rep5 922.52361573722 922.52250993586 95.945 2 -1.2868132720692034 0.377670471173544 1.0 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'ENSG00000140740|ENST00000268379|UQCRC2'] 33671 22032 GLPPVEEGD True PC9_epitope_Rep1 911.4236269124299 911.42252993586 89.561 2 -1.2869054569857317 0.37771464107597946 1.0 ['nc|ENSG00000230561|P0DO97|CCDC192', 'ENSG00000230561|ENST00000514853|CCDC192', 'ENST00000513708.1_2_5:127271225-127277157:+|nuORF'] 47122 16505 IVYMHRFYMIQ True H1975_Epitope_Rep1 1499.7417477423498 1499.7406499358601 68.857 2 -1.2869454867836496 0.3777344226313864 1.0 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1', 'ENST00000550457.1_1_12:49099541-49108300:-|nuORF', 'nc|ENSG00000129315|O60563-2|CCNT1'] 7040 7897 AQTDPFPSL True PC9_epitope_Rep3 974.4709114580199 974.46980993586 35.359 2 -1.2869639160200756 0.3777374042823001 1.0 ['ENST00000557662.1_1_14:24808931-24809147:-|nuORF', 'ENST00000216274.9_1_14:24808704-24809147:-|nuORF'] 109295 5822 TGELEPPDP True H1975_Epitope_Rep3 953.4341915961298 953.43308993586 27.415 2 -1.286974455624335 0.3777374042823001 1.0 ['ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000477051.1_1_8:133854703-133858165:+|nuORF'] 139534 9037 YTLIDYNI True PC9_epitope_Rep5 1013.50696261357 1013.50586993586 39.706 2 -1.2870884929860367 0.3777449916476656 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 123140 6248 VHDWLYYYAYK True PC9_epitope_Rep5 1519.7136013348702 1519.71196490379 29.011 3 -1.2871041132090522 0.377760165823325 1.0 ['nc|ENSG00000057252|P35610-3|SOAT1', 'nc|ENSG00000057252|P35610-2|SOAT1', 'ENSG00000057252|ENST00000367619|SOAT1'] 75005 17228 NLYSAKQI True PC9_epitope_Rep4 935.5076313199099 935.50652993586 74.275 2 -1.2871245841024155 0.377760165823325 1.0 ['nc|ENSG00000140527|Q6P2C0-2|WDR93', 'ENSG00000140527|ENST00000268130|WDR93'] 99742 14539 SLGITRFL True PC9_epitope_Rep5 905.5334521449299 905.53234993586 60.922 2 -1.2871752857659358 0.3777875318531524 1.0 ['ENSG00000127364|ENST00000247881|TAS2R4'] 139111 18411 YSPIRKRR True NCI_RA007_Epitope_Rep4 1074.6410455313 1074.6399499358602 79.676 2 -1.2872294562044693 0.3777875318531524 1.0 ['ENSG00000177679|ENST00000611745|SRRM3', 'nc|ENSG00000177679|A6NNA2|SRRM3'] 56896 3177 LEDPNRCYYK True NCI_RA007_Epitope_Rep2 1299.59177195003 1299.5906699358602 17.002 2 -1.2874003315443534 0.3777951181447975 1.0 ['nc|ENSG00000102893|Q93100-4|PHKB', 'nc|ENSG00000102893|Q93100-2|PHKB', 'nc|ENSG00000102893|Q93100-3|PHKB', 'ENSG00000102893|ENST00000323584|PHKB'] 48085 25667 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 106.41 3 -1.2876193518589658 0.3778422599090477 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 134536 19567 WVFRRRWRLN True NCI_RA007_Epitope_Rep3 1487.8374539220697 1487.83579490379 85.347 3 -1.2876358263214331 0.3778422599090477 1.0 ['nc|ENSG00000169783|Q96FE5-2|LINGO1', 'ENSG00000169783|ENST00000355300|LINGO1'] 36086 12748 GVEFSFSSKA True PC9_epitope_Rep3 1057.50802524273 1057.5069299358602 54.055 2 -1.2876388979710782 0.3778422599090477 1.0 ['Tigger1_dup324|chr1:83019440-83021751:-|3.250534866687885|0.2214501882032552|3.88|499.0|160|3|anti-sense'] 121780 5777 VGMKLTDV True PC9_epitope_Rep5 861.4629896266099 861.46188993586 27.215 2 -1.2876853600798406 0.37784984516349274 1.0 ['ENSG00000198796|ENST00000361673|ALPK2'] 137945 9299 YPSYVPAA True PC9_epitope_Rep3 866.4174193331799 866.41632993586 40.708 2 -1.2877997012355702 0.37786501511752657 1.0 ['nc|ENSG00000179348|P23769-2|GATA2', 'ENSG00000179348|ENST00000341105|GATA2'] 57283 7249 LEGGDYPK True NCI_RA007_Epitope_Rep1 877.41814760917 877.41704993586 32.188 2 -1.2878272880909953 0.37786501511752657 1.0 ['ENSG00000127124|ENST00000372583|HIVEP3', 'nc|ENSG00000127124|Q5T1R4-2|HIVEP3', 'HIVEP3|p.E2268Q|1|0.16|ENSG00000127124|chr1:41510870-41510870|C/G|missense_variant'] 30284 5549 GAAPWWWL True PC9_epitope_Rep1 985.4810226492499 985.47992993586 26.174 2 -1.2879540231907711 0.3778969826272478 1.0 ['nc|ENSG00000171867|F7VJQ1|PRNP'] 85513 18281 QLKALCEKHGD True PC9_epitope_Rep4 1240.62340643148 1240.6217549037901 78.388 3 -1.2880249916398145 0.3779167581010899 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 3188 15720 AGELRRARA True NCI_RA007_Epitope_Rep4 998.5733598942998 998.57226993586 68.269 2 -1.2880372087552188 0.37792434198495617 1.0 ['ENST00000274605.5_1_5:177540505-177546575:+|nuORF'] 45096 21672 IQRWRRYYLPA True PC9_epitope_Rep4 1520.83645086256 1520.8353499358602 91.559 2 -1.288118145670046 0.37793327075689054 1.0 ['ENST00000372070.7_1_1:46016515-46016749:+|nuORF'] 60808 14915 LKKALAAA True NCI_RA007_Epitope_Rep4 784.5170738047999 784.51596993586 64.833 2 -1.2881781551407718 0.37793327075689054 1.0 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6', 'H1-2|p.D72N|1|0.18|ENSG00000187837|chr6:26056215-26056215|C/T|missense_variant'] 117736 9757 VALFTIYLFW True H1975_Epitope_Rep3 1271.6954320895898 1271.6943299358602 42.553 2 -1.28826095575914 0.37793327075689054 1.0 ['ENSG00000173926|ENST00000308660|MARCHF3'] 4472 4904 AKFWTWYRAR True PC9_epitope_Rep1 1383.72002412799 1383.71836490379 23.728 3 -1.2883974048118525 0.37793327075689054 1.0 ['ENST00000222823.8_1_7:30492653-30496398:-|nuORF'] 134337 4444 WRWVWSWEWAR True NCI_RA007_Epitope_Rep4 1646.7895006701401 1646.78785490379 23.463 3 -1.2884078663281249 0.37793327075689054 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 13383 23881 DNGNTNAN True H1975_Epitope_Rep3 818.3154734457801 818.3149249679301 99.572 1 -1.2884174234455954 0.37793327075689054 1.0 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B'] 110541 12546 TIRKMLSFWW True PC9_epitope_Rep5 1366.7219982739398 1366.7203649037901 53.257 3 -1.2884440402077864 0.377953043859863 1.0 ['ENSG00000154122|ENST00000284268|ANKH'] 131193 24888 VVPIEVLPTV True NCI_RA007_Epitope_Rep1 1064.648147544 1064.64757496793 103.01 1 -1.2885236091924916 0.37798500639970745 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 129375 12306 VTEEIKNP True H1975_Epitope_Rep2 928.48656152216 928.48546993586 52.42 2 -1.2885652946273993 0.37800477838997515 1.0 ['ENSG00000103064|ENST00000219343|SLC7A6', 'ENSG00000155465|ENST00000674313|SLC7A7'] 82369 15675 PTTRTIREN True PC9_epitope_Rep6 1086.57817049122 1086.5770699358602 72.503 2 -1.2885677727427562 0.37800775250493673 1.0 ['ENST00000482108.1_2_7:94297339-94297486:+|nuORF'] 137871 13098 YPKLHRKTK True NCI_RA007_Epitope_Rep3 1169.7033114346898 1169.70220993586 58.802 2 -1.2885800126927274 0.37800775250493673 1.0 ['ENST00000296525.7_1_4:177136745-177136853:-|nuORF'] 67657 3104 LTFICFFWK True NCI_RA007_Epitope_Rep4 1203.6150735939098 1203.61342490379 17.354 3 -1.2885994854078582 0.3780153341703336 1.0 ['ENST00000407924.2_1_6:27705341-27705923:-|nuORF'] 110775 11487 TKLPSGLP True PC9_epitope_Rep1 811.4803539429099 811.47924993586 49.065 2 -1.2887013457100365 0.37803049694664864 1.0 ['CON__Q05443'] 11427 21162 DFQCWDSKVK True PC9_epitope_Rep6 1254.5703082294597 1254.56920993586 94.247 2 -1.2887302012643356 0.37803049694664864 1.0 ['ENST00000414912.2_1_6:26402606-26405688:+|nuORF'] 42510 13805 IERNTKPYRK True H1975_Epitope_Rep1 1303.73606811495 1303.7349699358601 58.247 2 -1.2888603406334416 0.37803941643204503 1.0 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL'] 131909 23615 VYEMVIKSL True PC9_epitope_Rep3 1080.58891841572 1080.58782993586 96.121 2 -1.2889271679375247 0.37803941643204503 1.0 ['ENST00000461041.1_1_9:15423144-15433670:+|nuORF'] 40051 4712 HQWYWTYEYTD True PC9_epitope_Rep5 1590.6415585934199 1590.6399149037902 23.175 3 -1.2889805977761255 0.37803941643204503 1.0 ['ENSG00000198712|ENST00000361739|MT-CO2'] 82116 8854 PTCLDLTMQYS True H1975_Epitope_Rep1 1270.55736058726 1270.5562699358602 38.98 2 -1.289038695073975 0.37803941643204503 1.0 ['nc|ENSG00000173253|Q9Y5R5-3|DMRT2', 'ENST00000382255.7_2_9:1055783-1057270:+|nuORF', 'ENST00000259622.10_2_9:1056133-1057270:+|nuORF', 'ENSG00000173253|ENST00000358146|DMRT2'] 54498 17089 LAAAVPTAP True PC9_epitope_Rep3 809.4647038787699 809.46360993586 70.883 2 -1.289041743459384 0.37803941643204503 1.0 ['ENST00000530694.5_1_11:12023362-12031257:-|nuORF', 'ENST00000533900.1_1_11:12023572-12030129:-|nuORF', 'ENST00000534479.5_1_11:12023699-12030797:-|nuORF', 'ENST00000526218.5_1_11:12000483-12031257:-|nuORF', 'ENSG00000050165|ENST00000683431|DKK3'] 110346 5783 TILATTAA True NCI_RA007_Epitope_Rep1 760.43306939732 760.43196993586 26.548 2 -1.2890470197122217 0.37803941643204503 1.0 ['ENSG00000181291|ENST00000631683|TMEM132E'] 121575 23435 VGKTRQKVDRD True PC9_epitope_Rep4 1300.7211463267997 1300.72057496793 98.431 1 -1.2890762829503044 0.3780545771429268 1.0 ['ENST00000541775.5_1_12:7270841-7271144:+|nuORF'] 44258 8471 ILTRERDPS True NCI_RA007_Epitope_Rep2 1085.58292151849 1085.58182993586 37.594 2 -1.2891126909741648 0.3780545771429268 1.0 ['ENSG00000179299|ENST00000381782|NSUN7'] 86325 8529 QQIATTFARL True NCI_RA007_Epitope_Rep5 1147.6349570913499 1147.63386993586 39.491 2 -1.2891376151642202 0.37805754957282667 1.0 ['ENSG00000171109|ENST00000471841|MFN1', 'nc|ENSG00000171109|Q8IWA4-3|MFN1'] 112901 8773 TPQDPRGL True PC9_epitope_Rep3 882.4559301002199 882.45482993586 38.697 2 -1.2891562744459464 0.37805754957282667 1.0 ['NADSYN1|p.D407G|2|0.11|ENSG00000172890|chr11:71482918-71482918|A/G|missense_variant'] 89957 190 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 1.0274 3 -1.2892871837913362 0.37807270910265317 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 134821 15450 WYQVGLDLQPW True H1975_Epitope_Rep1 1403.6873865870298 1403.68628993586 64.699 2 -1.2892899851282198 0.37807270910265317 1.0 ['ENSG00000183396|ENST00000330862|TMEM89'] 121447 20752 VGIKGRRGDRR True PC9_epitope_Rep4 1268.7537838677597 1268.7526899358602 87.978 2 -1.2893611196921102 0.3780878678934861 1.0 ['ENST00000525051.5_1_8:144875319-144875475:-|nuORF'] 137710 11177 YMQWYNDELL True NCI_RA007_Epitope_Rep5 1373.5961886241298 1373.5945349037902 49.627 3 -1.2893766629595569 0.3780878678934861 1.0 ['ENSG00000116406|ENST00000318130|EDEM3', 'nc|ENSG00000116406|Q9BZQ6-2|EDEM3', 'ENST00000474725.5_1_1:184690416-184706818:-|nuORF'] 21876 22871 ESEKKFQKRLQ True NCI_RA007_Epitope_Rep5 1419.78341223019 1419.78175490379 95.192 3 -1.289432429487532 0.3780954470117968 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant', 'REV3L|p.M1011Nfs*5|1|0.26|ENSG00000009413|chr6:111375323-111375324|-/T|frameshift_variant'] 128991 14945 VSWPFLLYMLV True PC9_epitope_Rep5 1366.73591700258 1366.73428490379 62.488 3 -1.2894374255875167 0.3781030259453794 1.0 ['nc|ENSG00000001461|Q6P499-3|NIPAL3', 'NIPAL3|p.A273Cfs*51|1|0.5|ENSG00000001461|chr1:24458928-24458929|-/T|frameshift_variant', 'nc|ENSG00000001461|Q6P499-2|NIPAL3', 'ENSG00000001461|ENST00000374399|NIPAL3'] 58884 14746 LFTEDQKL True NCI_RA007_Epitope_Rep3 992.5178616504398 992.51676993586 65.416 2 -1.2895472308007272 0.37813170208617664 1.0 ['ENST00000473975.5_1_2:149987462-150017984:+|nuORF'] 2426 5837 AEQLRGFNA True PC9_epitope_Rep5 1004.5039429217999 1004.50284993586 27.444 2 -1.2895579338965812 0.37813170208617664 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 72226 8303 MRWYQPPNDWR True PC9_epitope_Rep1 1547.7092017441096 1547.7081099358602 36.771 2 -1.2895621729865938 0.37813170208617664 1.0 ['ENST00000303531.11_2_16:24231131-24231431:+|nuORF'] 119399 7686 VENYLRHLKMH True NCI_RA007_Epitope_Rep2 1438.7503382801 1438.74924993586 34.523 2 -1.289590635955499 0.37813170208617664 1.0 ['ENSG00000186130|ENST00000373659|ZBTB6'] 98269 20375 SIFEQWLRRHR True PC9_epitope_Rep4 1526.82186342758 1526.8207699358602 86.518 2 -1.2896279951268743 0.37813170208617664 1.0 ['ENSG00000077498|ENST00000263321|TYR'] 35993 5588 GVCMPVKR True PC9_epitope_Rep6 888.4673638144 888.4662699358599 29.54 2 -1.2897594453002315 0.37813170208617664 1.0 ['ENST00000375859.3_1_9:91091428-91091536:+|nuORF'] 66867 10155 LSWESWRRWRR True NCI_RA007_Epitope_Rep2 1616.8436615013197 1616.8425699358602 44.089 2 -1.2897952323827822 0.37813170208617664 1.0 ['ENST00000377604.7_1_X:47004707-47006821:+|nuORF'] 13001 12981 DLQGRFEL True PC9_epitope_Rep1 976.4977949121999 976.49668993586 54.803 2 -1.2898143764987098 0.3781392798391519 1.0 ['ENSG00000255423|ENST00000533473|EBLN2'] 15943 7266 EDSTWERRQD True NCI_RA007_Epitope_Rep2 1320.5694562823198 1320.5683499358602 32.884 2 -1.289851358125406 0.3781590427217118 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7', 'CHD7|p.R1548Gfs*11|1|0.18|ENSG00000171316|chr8:60841749-60841749|G/-|frameshift_variant'] 94193 7752 RWLWWQPWWWK True NCI_RA007_Epitope_Rep2 1756.8779217517197 1756.87682993586 34.781 2 -1.2899021301499438 0.3781788051226437 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1'] 14183 9979 DSRKRKAV True NCI_RA007_Epitope_Rep3 958.5672118846999 958.56610993586 46.336 2 -1.2899674996564305 0.37821832847969394 1.0 ['nc|ENSG00000146856|Q8NEM8-2|AGBL3', 'ENSG00000146856|ENST00000436302|AGBL3', 'nc|ENSG00000146856|Q8NEM8|AGBL3'] 102244 13244 SPTEDKVLAV True NCI_RA007_Epitope_Rep4 1057.5655401188499 1057.56444993586 58.073 2 -1.2899962599138126 0.37821832847969394 1.0 ['ENSG00000198128|ENST00000359959|OR2L3', 'ENSG00000279263|ENST00000623922|OR2L8'] 81878 7541 PSLESPPIP True H1975_Epitope_Rep3 935.4963979298699 935.49530993586 33.99 2 -1.2900316793898863 0.37821965543290204 1.0 ['ENST00000409638.7_1_2:220113277-220113556:+|nuORF'] 60058 24918 LHSKLISGG True H1975_Epitope_Rep3 910.52361573722 910.52250993586 103.65 2 -1.2900477158370158 0.37821965543290204 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 23408 21004 EVVHSNNM True NCI_RA007_Epitope_Rep5 928.40726565564 928.40616993586 87.802 2 -1.2900947987748144 0.37821965543290204 1.0 ['ENST00000271469.7_2_1:162569461-162569569:+|nuORF'] 29910 15815 FWGRFSAEL True PC9_epitope_Rep4 1111.5450794577898 1111.54398993586 68.757 2 -1.2901058535297196 0.37821965543290204 1.0 ['ENST00000433032.1_1_6:41701860-41701905:-|nuORF'] 133810 13556 WLSLFLHA True PC9_epitope_Rep5 985.5385375253701 985.53744993586 57.166 2 -1.2901630509566333 0.37821965543290204 1.0 ['ENSG00000007384|ENST00000262316|RHBDF1', 'ENST00000486045.1_1_16:109134-109779:-|nuORF', 'ENSG00000129667|ENST00000675367|RHBDF2', 'nc|ENSG00000129667|Q6PJF5|RHBDF2', 'ENST00000590168.5_1_17:74469085-74473795:-|nuORF'] 85911 20576 QNRRAKLKRDV True NCI_RA007_Epitope_Rep5 1382.82186342758 1382.82022490379 86.086 3 -1.2902069733459538 0.3782394151690527 1.0 ['ENST00000550249.2_1_2:74725056-74728711:-|nuORF', 'nc|ENSG00000179528|Q6XYB7-2|LBX2', 'ENSG00000179528|ENST00000377566|LBX2'] 55934 11371 LDHFNKAP True PC9_epitope_Rep3 940.4766655448 940.47556993586 48.742 2 -1.290224023740729 0.37824074074074077 1.0 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 56970 4848 LEEAEGRDPQG True H1975_Epitope_Rep3 1199.5418445521498 1199.54074993586 23.773 2 -1.290227743489004 0.37824074074074077 1.0 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'TONSL|p.R443Afs*6|1|0.12|ENSG00000160949|chr8:144440168-144440175|GCAGCCTC/-|frameshift_variant'] 90028 17459 RGGGCSPH True NCI_RA007_Epitope_Rep5 769.32895576529 769.32840496793 73.941 1 -1.2902461096288895 0.37824074074074077 1.0 ['nc|ENSG00000221955|A0AV02-3|SLC12A8'] 6967 11648 AQNVDWPVVY True H1975_Epitope_Rep1 1189.5767735088898 1189.57566993586 49.794 2 -1.2903286999985528 0.37824074074074077 1.0 ['KCNH5|p.I35N|1|0.32|ENSG00000140015|chr14:63016924-63016924|A/T|missense_variant'] 120728 11854 VGATFQGK True H1975_Epitope_Rep1 806.4286527232199 806.42810496793 50.594 1 -1.2903943292868272 0.37824074074074077 1.0 ['nc|ENSG00000104755|Q99965-2|ADAM2', 'ENSG00000104755|ENST00000265708|ADAM2'] 128484 5271 VSFFWVSFY True H1975_Epitope_Rep2 1180.5593325395998 1180.55767490379 25.344 3 -1.2904711960516035 0.3782483156881617 1.0 ['ENST00000397463.2_1_2:133403511-133403547:-|nuORF'] 79228 15715 PGGGGKAK True NCI_RA007_Epitope_Rep5 670.37622322754 670.3756749679301 67.165 1 -1.2905438802372828 0.3783243789822497 1.0 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant'] 138959 13846 YSELPVVKKM True H1975_Epitope_Rep3 1192.6525813014398 1192.6514899358601 58.568 2 -1.2905474796246361 0.3783243789822497 1.0 ['nc|ENSG00000008128|Q9UQ88-4|CDK11A', 'nc|ENSG00000008128|Q9UQ88|CDK11A', 'ENSG00000008128|ENST00000404249|CDK11A', 'nc|ENSG00000008128|Q9UQ88-3|CDK11A', 'nc|ENSG00000008128|Q9UQ88-10|CDK11A', 'nc|ENSG00000008128|Q9UQ88-5|CDK11A', 'ENST00000356937.7_1_1:1634348-1635645:-|nuORF', 'ENST00000478901.1_1_1:1634913-1635060:-|nuORF'] 26983 20518 FLKVDVSRIS True PC9_epitope_Rep2 1162.6710082468999 1162.66990993586 84.353 2 -1.2907503157862565 0.37835170859474937 1.0 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.W3587Cfs*14|1|0.26|ENSG00000198626|chr1:237727121-237727121|G/-|frameshift_variant', 'RYR2|p.P2526Hfs*3|1|0.2|ENSG00000198626|chr1:237649940-237649940|C/-|frameshift_variant'] 3089 14468 AGAIGPSRF True NCI_RA007_Epitope_Rep2 874.4661008611 874.4655549679301 60.939 1 -1.2907615528199088 0.37835170859474937 1.0 ['nc|ENSG00000184640|Q9UHD8-7|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-2|SEPTIN9', 'nc|ENSG00000184640|Q9UHD8-5|SEPTIN9', 'ENSG00000184640|ENST00000427177|SEPTIN9'] 64560 23744 LRDILHRRALE True H1975_Epitope_Rep1 1390.81571541798 1390.81460993586 98.574 2 -1.2908709917836958 0.3783530271653064 1.0 ['SIDT1|p.R517L|1|0.25|ENSG00000072858|chr3:113608165-113608165|G/T|missense_variant'] 91278 13629 RLWRHWWLRGW True H1975_Epitope_Rep1 1650.8796530872198 1650.87854993586 57.556 2 -1.2909047662857513 0.3783530271653064 1.0 ['ENST00000473038.5_1_1:46033610-46035625:+|nuORF'] 122366 11686 VGSEAFVL True PC9_epitope_Rep1 820.4330693973199 820.43196993586 49.827 2 -1.290908926857629 0.3783530271653064 1.0 ['nc|ENSG00000167930|Q9H0X4-2|FAM234A', 'ENSG00000167930|ENST00000399932|FAM234A'] 62385 11203 LLRRLWWEDCW True NCI_RA007_Epitope_Rep2 1574.7816384083796 1574.78054993586 48.161 2 -1.2909462860398664 0.3783530271653064 1.0 ['AluJr4_dup4313|chr3:128811130-128811275:-|1.1423359140543188|0.0007489705087858|10.57|502.0|1|1|sense'] 124099 7150 VKSYIVNR True H1975_Epitope_Rep3 977.5658149023699 977.56470993586 32.474 2 -1.2909695049392003 0.3783530271653064 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN', 'nc|ENSG00000160145|O60229|KALRN'] 124438 12631 VLEQITSFALG True H1975_Epitope_Rep1 1176.63903941228 1176.6379499358602 53.636 2 -1.2909786793437386 0.37835599083954585 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 3308 14628 AGGLRDRQEP True PC9_epitope_Rep1 1097.55776939981 1097.55666993586 61.089 2 -1.2909817516653805 0.37835599083954585 1.0 ['ENST00000367602.7_1_1:180167664-180168105:+|nuORF'] 79310 19437 PGKKITSRA True H1975_Epitope_Rep2 956.5767139392399 956.57560993586 80.672 2 -1.2910256415476735 0.37836356327579695 1.0 ['nc|ENSG00000164463|Q8IUR6-2|CREBRF', 'ENST00000520464.1_1_5:172507634-172535847:+|nuORF', 'ENSG00000164463|ENST00000296953|CREBRF', 'nc|ENSG00000164463|Q8IUR6-3|CREBRF'] 103288 7219 SQTQKAKFS True NCI_RA007_Epitope_Rep4 1023.5349086969098 1023.53380993586 34.4 2 -1.291115383811594 0.3784106412005457 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 82685 15827 PVNSSPAVI True PC9_epitope_Rep6 882.4810822188999 882.47998993586 73.142 2 -1.2911355538150033 0.3784106412005457 1.0 ['CHAT|p.Q607Rfs*9|1|0.28|ENSG00000070748|chr10:49655426-49655426|C/-|frameshift_variant', 'nc|ENSG00000070748|P28329-3|CHAT', 'nc|ENSG00000070748|P28329-2|CHAT', 'ENSG00000070748|ENST00000337653|CHAT'] 3800 18629 AGVLGFRRR True NCI_RA007_Epitope_Rep2 1030.6148307834599 1030.61427496793 77.262 1 -1.2912180963956412 0.3784106412005457 1.0 ['ENST00000409185.5_1_2:131807576-131807882:-|nuORF'] 109022 18003 TEWGWVGV True NCI_RA007_Epitope_Rep5 932.4392174069199 932.43812993586 76.043 2 -1.29128646829949 0.37841821260216574 1.0 ['ENST00000409638.7_1_2:220113277-220113556:+|nuORF'] 8497 4823 ATVLASTP True H1975_Epitope_Rep1 758.4174193331801 758.41632993586 23.627 2 -1.2913746824565764 0.37843335485206886 1.0 ['ENSG00000154447|ENST00000284637|SH3RF1'] 10790 14150 DACLVPNTP True PC9_epitope_Rep2 928.43241777432 928.4318649679301 59.698 1 -1.291381022769965 0.37843335485206886 1.0 ['ENSG00000172689|ENST00000308287|MS4A10'] 109813 4039 THKYLDSEEDE True NCI_RA007_Epitope_Rep2 1364.5732042500797 1364.57210993586 20.348 2 -1.2914526699018618 0.3784531059683313 1.0 ['ENSG00000126709|ENST00000361157|IFI6', 'nc|ENSG00000126709|P09912-2|IFI6', 'nc|ENSG00000126709|P09912-3|IFI6'] 62981 21404 LNELPVPMV True PC9_epitope_Rep4 1010.54705360374 1010.5464749679301 90.5 1 -1.2915188129662374 0.37845606684368227 1.0 ['ENST00000368854.7_1_10:125528237-125699754:-|nuORF', 'ENSG00000121898|ENST00000241305|CPXM2'] 119678 14357 VESSQGGG True NCI_RA007_Epitope_Rep3 719.3085971601898 719.3080449679301 63.785 1 -1.2915491630808436 0.37845606684368227 1.0 ['RYR1|p.R4174Pfs*35|1|0.31|ENSG00000196218|chr19:38561349-38561352|CCGC/-|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1', 'RYR1|p.M2582Afs*19|1|0.11|ENSG00000196218|chr19:38502635-38502636|TA/-|frameshift_variant'] 82672 19274 PVMGALSS True PC9_epitope_Rep6 760.37892564948 760.37782993586 86.785 2 -1.2916486971564887 0.378463637138716 1.0 ['ENST00000583776.1_1_18:2909718-2909787:+|nuORF'] 66146 10769 LSPDLSHTTL True PC9_epitope_Rep4 1082.56078909158 1082.5596899358602 49.182 2 -1.2918374673026367 0.3784955665984605 1.0 ['ENSG00000198734|ENST00000367797|F5'] 137459 11720 YLPDLMYLDYR True H1975_Epitope_Rep1 1460.70098804584 1460.69988993586 50.073 2 -1.291934422660086 0.37851531575421715 1.0 ['nc|ENSG00000171962|Q9H069-2|DRC3', 'ENSG00000171962|ENST00000399187|DRC3'] 64152 7444 LQEVM[Oxidation]FTALI True NCI_RA007_Epitope_Rep1 1179.62094720043 1179.6198499358602 32.953 2 -1.2920544452357583 0.3785515082873601 1.0 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8', 'TRPM8|p.K472Sfs*11|1|0.35|ENSG00000144481|chr2:233960824-233960824|C/-|frameshift_variant'] 10698 17276 CSRERQERR True NCI_RA007_Epitope_Rep5 1218.5999856482997 1218.5983349037901 73.226 3 -1.2920601565230823 0.3785515082873601 1.0 ['SYNE1|p.R1326C|1|0.23|ENSG00000131018|chr6:152442107-152442107|G/A|missense_variant'] 81413 19024 PPYSVETP True PC9_epitope_Rep6 888.42289863644 888.42180993586 85.819 2 -1.2921068257294994 0.3785515082873601 1.0 ['nc|ENSG00000197256|Q63ZY3-3|KANK2', 'ENSG00000197256|ENST00000586659|KANK2', 'nc|ENSG00000197256|Q63ZY3-2|KANK2', 'ENST00000590400.1_1_19:11303345-11305238:-|nuORF'] 16608 12301 EERSGWEL True PC9_epitope_Rep3 1004.4563240230399 1004.45522993586 52.341 2 -1.2921343649507033 0.3785515082873601 1.0 ['ENST00000563969.5_1_16:67312069-67312180:+|nuORF'] 80471 22395 PLLDFAYMP True NCI_RA007_Epitope_Rep1 1065.5205045027299 1065.51997496793 91.765 1 -1.2921392996411767 0.3785515082873601 1.0 ['ENSG00000119777|ENST00000238788|TMEM214', 'nc|ENSG00000119777|Q6NUQ4-2|TMEM214', 'ENST00000460904.1_1_2:27259408-27260666:+|nuORF'] 15673 6541 ECGKAFTC[Carbamidomethyl]SSY True H1975_Epitope_Rep3 1251.49000958286 1251.48947496793 30.127 1 -1.2921571470061957 0.3785515082873601 1.0 ['ENSG00000169981|ENST00000396056|ZNF35'] 42737 13663 IFDRELHRQTG True NCI_RA007_Epitope_Rep3 1370.7054962626598 1370.70438993586 61.053 2 -1.2921742292633454 0.3785515082873601 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2', 'chr1:183207943-183215453|223|30.46|0.17|7.49|+|2|None,LAMC2|1'] 82055 7184 PSVPGPGLGQG True PC9_epitope_Rep5 964.4977949121999 964.49668993586 32.599 2 -1.292192698836329 0.3785515082873601 1.0 ['ENST00000534025.5_1_11:8986022-8986145:-|nuORF'] 110853 16496 TKYITKGWK True PC9_epitope_Rep2 1123.6389798426299 1123.6373249037902 68.693 3 -1.2922299983234775 0.3785666443402545 1.0 ['nc|ENSG00000116747|P10155-3|RO60', 'nc|ENSG00000116747|P10155-5|RO60', 'nc|ENSG00000116747|P10155-4|RO60', 'ENSG00000116747|ENST00000400968|RO60'] 134478 18783 WTRTWSWRMRK True H1975_Epitope_Rep1 1592.8146698721596 1592.8135699358602 78.324 2 -1.2922334962211701 0.3785666443402545 1.0 ['ENST00000487093.5_1_3:51575631-51661706:+|nuORF'] 55618 5463 LCVLISKQA True PC9_epitope_Rep6 973.5630380210499 973.56194993586 28.952 2 -1.2922693612665805 0.3785679493424257 1.0 ['ENST00000435306.1_1_X:102942274-102942946:+|nuORF'] 122568 6006 VGTEQTDRRW True NCI_RA007_Epitope_Rep2 1246.60544786822 1246.60434993586 27.971 2 -1.2923199092548423 0.3785679493424257 1.0 ['ENSG00000275793|ENST00000619918|RIMBP3', 'ENSG00000274600|ENST00000620804|RIMBP3B', 'ENSG00000183246|ENST00000433039|RIMBP3C'] 33461 6533 GLGPAEAPAA True PC9_epitope_Rep2 852.4341320264799 852.43302993586 30.544 2 -1.2923681672873066 0.3785679493424257 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1'] 36179 17880 GVFLPAGI True PC9_epitope_Rep4 772.4483255386399 772.44722993586 76.815 2 -1.2923740549606388 0.3785679493424257 1.0 ['ENST00000555241.5_2_14:64663518-64663803:+|nuORF'] 32295 5542 GFTGGHHTREG True H1975_Epitope_Rep3 1154.52171824426 1154.5206299358601 26.367 2 -1.2924025179373178 0.3785679493424257 1.0 ['ENST00000547490.1_1_12:53700445-53700930:+|nuORF', 'ENSG00000139637|ENST00000267103|MYG1'] 64151 6908 LQEVM[Oxidation]FTALI True H1975_Epitope_Rep3 1179.62094720043 1179.6198499358602 31.532 2 -1.2924830513714396 0.378583083704732 1.0 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8', 'TRPM8|p.K472Sfs*11|1|0.35|ENSG00000144481|chr2:233960824-233960824|C/-|frameshift_variant'] 16449 5819 EELQGPGL True PC9_epitope_Rep2 841.4181476091699 841.4175949679301 27.777 1 -1.2925192228293307 0.378583083704732 1.0 ['ENSG00000182853|ENST00000328739|VMO1'] 108635 23760 TEKLAQLIAT True NCI_RA007_Epitope_Rep3 1086.62847472858 1086.62736993586 102.99 2 -1.2925516851098418 0.3785906506094517 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 10970 21032 DCLLAQKV True NCI_RA007_Epitope_Rep4 888.47388866348 888.47278993586 91.166 2 -1.2925909748891642 0.37861039403828356 1.0 ['ENSG00000279804|ENST00000624297|PRAMEF18', 'ENSG00000204480|ENST00000376101|PRAMEF19'] 47150 15253 IWNTFFHERYL True PC9_epitope_Rep5 1524.7513838259201 1524.74917987172 63.68 4 -1.292637582219186 0.3786301369863014 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 36987 22142 GVRRIDREEK True PC9_epitope_Rep6 1256.6949315789595 1256.69437496793 98.112 1 -1.2926440743131977 0.37863770304166766 1.0 ['ENSG00000144655|ENST00000273153|CSRNP1'] 81378 24951 PPTLIEERRD True PC9_epitope_Rep5 1224.64625005104 1224.64459490379 101.15 3 -1.2926971938457372 0.37864526891278144 1.0 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 20679 5133 EQIFREGPV True NCI_RA007_Epitope_Rep1 1073.5505587610498 1073.54946993586 24.048 2 -1.2928192687723228 0.3786893629456458 1.0 ['nc|ENSG00000065675|Q04759-3|PRKCQ', 'nc|ENSG00000065675|Q04759-2|PRKCQ', 'ENSG00000065675|ENST00000263125|PRKCQ'] 15440 14434 EANMDIVYKDM True H1975_Epitope_Rep2 1327.5788243078298 1327.5777299358601 60.674 2 -1.2928994925547106 0.3786923170583222 1.0 ['ENSG00000050393|ENST00000379170|MCUR1'] 40516 17927 HSHNHCCGH True NCI_RA007_Epitope_Rep5 1030.3610012529 1030.35990993586 75.746 2 -1.2929375641646903 0.3786923170583222 1.0 ['ENST00000369893.9_1_10:104488214-104489532:+|nuORF'] 3152 18226 AGEAERAEF True PC9_epitope_Rep5 978.4406739588998 978.43956993586 75.118 2 -1.2929550313461846 0.3787120575665705 1.0 ['ENST00000487506.1_1_20:36841446-36845915:-|nuORF', 'ENSG00000149633|ENST00000279024|KIAA1755', 'KIAA1755|p.G915R|1|0.34|ENSG00000149633|chr20:38217411-38217411|C/G|missense_variant', 'ENST00000460881.5_1_20:36845335-36845915:-|nuORF'] 65467 10685 LSFFGMREH True PC9_epitope_Rep5 1122.5280494946599 1122.52694993586 46.091 2 -1.2930058415392645 0.3787196220717869 1.0 ['ENST00000316660.6_1_18:57570124-57570343:+|nuORF'] 110644 8986 TIVGVSVAIP True NCI_RA007_Epitope_Rep2 954.57498260374 954.5744349679301 39.562 1 -1.2930575889059057 0.37872552839193535 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|99|2|sense'] 109427 26029 TGRGGPPP True H1975_Epitope_Rep3 737.3820368839699 737.3814849679301 108.43 1 -1.2931101673587513 0.37872552839193535 1.0 ['ENST00000581080.1_1_17:38497513-38497723:-|nuORF'] 62384 11360 LLRRLWWEDCW True NCI_RA007_Epitope_Rep1 1574.7816384083796 1574.78054993586 48.161 2 -1.29312259496497 0.37872552839193535 1.0 ['AluJr4_dup4313|chr3:128811130-128811275:-|1.1423359140543188|0.0007489705087858|10.57|502.0|1|1|sense'] 111082 7903 TLEDQALYNRL True NCI_RA007_Epitope_Rep3 1334.6830294825797 1334.6813849037899 38.198 3 -1.2931484994023985 0.37872552839193535 1.0 ['ENSG00000196839|ENST00000372874|ADA', 'ENST00000464097.5_1_20:43249631-43251634:-|nuORF', 'ENST00000492931.5_1_20:43248477-43251634:-|nuORF'] 95846 5223 SDKSVKVWD True PC9_epitope_Rep6 1062.53457434374 1062.53346993586 27.859 2 -1.2933043879710326 0.3787406559692225 1.0 ['ENSG00000140395|ENST00000267973|SKIC8'] 122515 6059 VGSSPVLYMQP True H1975_Epitope_Rep2 1176.58489566444 1176.58324490379 28.283 3 -1.2933096077370652 0.3787406559692225 1.0 ['RRN3|p.P641S|1|0.11|ENSG00000085721|chr16:15061779-15061779|G/A|missense_variant'] 125083 25679 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 111.05 3 -1.2934185812323664 0.3787436084733382 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 18079 18820 EIKKAYYQL True H1975_Epitope_Rep3 1154.63356010902 1154.6324699358602 78.935 2 -1.2934266812594752 0.3787436084733382 1.0 ['ENSG00000103423|ENST00000262375|DNAJA3', 'nc|ENSG00000103423|Q96EY1-2|DNAJA3', 'ENST00000573120.5_1_16:4476059-4487492:+|nuORF'] 137752 13639 YNLYIVENPHY True PC9_epitope_Rep3 1423.6772158261501 1423.67610993586 57.528 2 -1.2934670124204002 0.3787511717656225 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 109373 4626 TGLDGLPGPK True NCI_RA007_Epitope_Rep2 953.5181960036099 953.51708993586 22.619 2 -1.2935345053605067 0.3787541239058715 1.0 ['ENSG00000188153|ENST00000328300|COL4A5', 'nc|ENSG00000188153|P29400|COL4A5', 'ENST00000483338.1_1_X:107826116-107869594:+|nuORF'] 99120 9091 SLAGNVLDSGY True NCI_RA007_Epitope_Rep2 1094.52440358286 1094.5233099358602 39.966 2 -1.2935371063246075 0.3787541239058715 1.0 ['FANCM|p.F1328Cfs*6|1|0.33|ENSG00000187790|chr14:45176733-45176745|CAGTTTTCTTTAC/-|frameshift_variant', 'nc|ENSG00000187790|Q8IYD8-3|FANCM', 'ENSG00000187790|ENST00000267430|FANCM'] 8376 5062 ATNREWWWGRV True PC9_epitope_Rep1 1459.71091599627 1459.70926490379 24.327 3 -1.2935898617289083 0.3787570759023678 1.0 ['ENSG00000136002|ENST00000409359|ARHGEF4', 'nc|ENSG00000136002|Q9NR80-3|ARHGEF4', 'nc|ENSG00000136002|Q9NR80|ARHGEF4', 'ENST00000496764.6_1_2:131792732-131796962:+|nuORF', 'nc|ENSG00000136002|Q9NR80-4|ARHGEF4'] 55492 11931 LAVMNTSLFYF True NCI_RA007_Epitope_Rep1 1304.6474959209997 1304.64638993586 50.393 2 -1.2935906478244952 0.3787570759023678 1.0 ['ENST00000293894.3_1_16:1035736-1036009:+|nuORF'] 1665 21371 AEGGKHIHELE True NCI_RA007_Epitope_Rep5 1218.59929985862 1218.59764490379 89.262 3 -1.2937461433342654 0.37878898546490397 1.0 ['ENSG00000264424|ENST00000255381|MYH4'] 110266 13346 TIFPIRAP True PC9_epitope_Rep1 913.5385375253699 913.53744993586 56.195 2 -1.293827337533006 0.37879193650484494 1.0 ['nc|ENSG00000131652|Q86W42-3|THOC6', 'ENSG00000131652|ENST00000326266|THOC6', 'nc|ENSG00000131652|Q86W42-2|THOC6'] 96087 7652 SEDLEARNETL True H1975_Epitope_Rep3 1275.59427404783 1275.59316993586 34.415 2 -1.2939173105543667 0.37879193650484494 1.0 ['ENSG00000130783|ENST00000253079|CCDC62', 'nc|ENSG00000130783|Q6P9F0-2|CCDC62'] 67054 13596 LTASPRLTL True PC9_epitope_Rep6 970.58113061334 970.58002993586 64.046 2 -1.2939506920845893 0.37879949847228817 1.0 ['ENST00000527285.1_1_11:18728401-18728901:+|nuORF'] 76990 9381 NVSVEIMVPNS True NCI_RA007_Epitope_Rep1 1187.58562394043 1187.58452993586 40.483 2 -1.2941177518087703 0.3788129610244176 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 45928 16678 ISRWFEVERRE True PC9_epitope_Rep2 1505.77391017565 1505.77280993586 69.396 2 -1.2941455551578174 0.3788129610244176 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 100802 6492 SLRSQPPK True NCI_RA007_Epitope_Rep2 911.51886470995 911.51776993586 29.863 2 -1.294148877523737 0.3788129610244176 1.0 ['FAM47A|p.E520Q|1|0.42|ENSG00000185448|chrX:34130721-34130721|C/G|missense_variant', 'FAM47A|p.E507Q|1|0.75|ENSG00000185448|chrX:34130760-34130760|C/G|missense_variant'] 35330 5137 GSVPSIRRNFH True PC9_epitope_Rep3 1268.67380221156 1268.67214490379 24.845 3 -1.2941758798796907 0.3788129610244176 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 59007 22806 LGALPEMLLP True PC9_epitope_Rep1 1052.59400379616 1052.59347496793 92.536 1 -1.2941919860211708 0.3788129610244176 1.0 ['ENST00000534667.1_1_11:64880702-64881078:+|nuORF', 'ENST00000531029.5_1_11:64880120-64882285:+|nuORF', 'ENST00000527851.5_1_11:64880615-64881038:+|nuORF', 'ENST00000533766.5_1_11:64880615-64882334:+|nuORF', 'nc|ENSG00000149809|O76062-2|TM7SF2', 'ENST00000529601.5_1_11:64879444-64883522:+|nuORF', 'ENSG00000149809|ENST00000279263|TM7SF2', 'ENST00000530650.5_1_11:64879967-64883522:+|nuORF'] 126651 4301 VPQQDLWHL True NCI_RA007_Epitope_Rep3 1134.5821932425 1134.58054490379 23.652 3 -1.294266023186022 0.3788448664110523 1.0 ['ENST00000419007.5_1_3:50311657-50311978:+|nuORF'] 60059 23811 LHSKLISGG True NCI_RA007_Epitope_Rep3 910.52361573722 910.52250993586 103.19 2 -1.2943543497991996 0.37886293650117453 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 118235 11488 VAYSNLAV True PC9_epitope_Rep3 835.4439684341899 835.44286993586 49.191 2 -1.2943976034763565 0.37886293650117453 1.0 ['ENSG00000125931|ENST00000651998|CITED1', 'nc|ENSG00000125931|Q99966-2|CITED1'] 32412 5379 GGGKGVWL True PC9_epitope_Rep4 772.4231734199599 772.42206993586 27.417 2 -1.2944559577429875 0.37886293650117453 1.0 ['ENST00000475826.1_1_6:32121346-32121991:-|nuORF'] 67785 15625 LTHLQEKQLW True H1975_Epitope_Rep3 1294.70337100434 1294.7022699358602 65.518 2 -1.2944574978544514 0.37886293650117453 1.0 ['ENST00000375394.6_1_6:31929408-31929824:+|nuORF'] 45298 12001 ISALRNDPKPL True NCI_RA007_Epitope_Rep1 1222.70337100434 1222.7022699358602 50.669 2 -1.2944940310418807 0.3788948393378773 1.0 ['ENSG00000116128|ENST00000234739|BCL9', 'BCL9|p.T343Hfs*34|1|0.11|ENSG00000116128|chr1:147619175-147619176|-/C|frameshift_variant'] 12818 16718 DLKHWKPV True PC9_epitope_Rep5 1021.5709002828098 1021.56980993586 69.313 2 -1.29450996482995 0.37890995837491787 1.0 ['nc|ENSG00000179583|P33076-2|CIITA', 'ENST00000573309.5_1_16:10971115-11002148:+|nuORF'] 96886 19668 SETCRCSILA True H1975_Epitope_Rep1 1081.4896153806098 1081.48907496793 81.868 1 -1.294529437507141 0.37890995837491787 1.0 ['nc|ENSG00000182973|Q9H9A5-4|CNOT10', 'nc|ENSG00000182973|Q9H9A5-3|CNOT10'] 110924 12433 TLASALVL True NCI_RA007_Epitope_Rep2 786.48510497018 786.4845549679301 52.971 1 -1.2945552374195468 0.37891751761741904 1.0 ['nc|ENSG00000284730|P0DPE3|TMDD1'] 10574 14266 CRGAGQCP True H1975_Epitope_Rep2 790.3214278567 790.3208749679301 60.023 1 -1.2946865977581912 0.3789494182366973 1.0 ['ENSG00000204644|ENST00000376883|ZFP57', 'nc|ENSG00000204644|Q9NU63-2|ZFP57'] 114683 17325 TSSDPPSWV True PC9_epitope_Rep5 974.4345259493 974.43342993586 71.639 2 -1.2947848943768625 0.3789813180794742 1.0 ['ENST00000439321.1_1_2:122407632-122408176:+|nuORF'] 84148 11246 QEREKELQHRY True H1975_Epitope_Rep3 1514.7589883874998 1514.75788993586 48.36 2 -1.2948530385991373 0.37898848784287 1.0 ['ENSG00000096401|ENST00000371477|CDC5L'] 19348 21747 ELNFYKIP True PC9_epitope_Rep1 1022.5436824754598 1022.5425899358601 88.483 2 -1.29489117086215 0.37898848784287 1.0 ['ENST00000490685.1_1_9:120470560-120471008:+|nuORF', 'TLR4|p.T232Ifs*5|1|0.21|ENSG00000136869|chr9:117712820-117712832|TGACTTTAAGAAA/-|frameshift_variant', 'TLR4|p.F483Sfs*13|1|0.49|ENSG00000136869|chr9:117713574-117713574|T/-|frameshift_variant', 'nc|ENSG00000136869|O00206-2|TLR4', 'ENSG00000136869|ENST00000355622|TLR4'] 121003 15065 VGFAAFSV True PC9_epitope_Rep6 796.41194002992 796.41084993586 69.997 2 -1.2949436778372156 0.37898848784287 1.0 ['ENSG00000177721|ENST00000616064|ANXA2R'] 97285 7961 SFRDREPHDY True NCI_RA007_Epitope_Rep3 1320.58471242364 1320.58360993586 38.419 2 -1.2950599290488667 0.37898848784287 1.0 ['ENSG00000158321|ENST00000342771|AUTS2', 'nc|ENSG00000158321|Q8WXX7-2|AUTS2', 'nc|ENSG00000158321|Q8WXX7-5|AUTS2'] 46198 9340 ITDISKNSV True PC9_epitope_Rep5 975.52367530687 975.52256993586 40.879 2 -1.295065558564185 0.37898848784287 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 19290 16331 ELLRRKDTHIR True NCI_RA007_Epitope_Rep1 1435.83717913855 1435.8360899358602 67.635 2 -1.2950700287829364 0.37898848784287 1.0 ['ENSG00000107560|ENST00000355624|RAB11FIP2', 'nc|ENSG00000107560|Q7L804-2|RAB11FIP2', 'ENST00000476207.1_1_10:119765292-119774614:-|nuORF'] 90052 7842 RGGRGGMG True H1975_Epitope_Rep3 746.3605902467399 746.3600449679301 35.141 1 -1.2951109673716719 0.37898848784287 1.0 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS'] 15742 16966 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 72.019 2 -1.29520589930069 0.37898848784287 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 55663 13017 LDASERVQL True PC9_epitope_Rep1 1029.5454733806098 1029.54436993586 54.94 2 -1.2952347325832498 0.37898848784287 1.0 ['MYH8|p.K1812Rfs*39|1|0.41|ENSG00000133020|chr17:10392861-10392861|C/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2', 'ENSG00000264424|ENST00000255381|MYH4'] 82931 17756 PWLFIPLP True H1975_Epitope_Rep2 981.5687750244899 981.56766993586 73.618 2 -1.295319322434968 0.37902794003115264 1.0 ['ENST00000479872.5_1_1:165879160-165879211:+|nuORF'] 103502 13105 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 57.088 2 -1.2953411053777713 0.37902794003115264 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 36919 4857 GVQWPNLC True PC9_epitope_Rep5 915.4272728242299 915.42616993586 23.723 2 -1.2953923198298292 0.37904766540516205 1.0 ['ENST00000589829.5_1_18:11905221-11905871:-|nuORF'] 95229 14456 SAAVLVPL True H1975_Epitope_Rep1 768.47454028648 768.47399496793 60.802 1 -1.2955151842275803 0.37905060903637183 1.0 ['nc|ENSG00000167799|Q8WV74-2|NUDT8', 'ENSG00000167799|ENST00000376693|NUDT8', 'ENST00000534054.1_1_11:67397109-67397382:-|nuORF'] 120872 20228 VGDVDFEAVKK True NCI_RA007_Epitope_Rep1 1205.62920300457 1205.62810993586 82.888 2 -1.2955486926628073 0.37905060903637183 1.0 ['nc|ENSG00000163738|Q9H903-2|MTHFD2L', 'nc|ENSG00000163738|Q9H903-1|MTHFD2L', 'ENSG00000163738|ENST00000325278|MTHFD2L'] 67078 8412 LTCLTEQN True PC9_epitope_Rep2 920.42733239388 920.42622993586 37.727 2 -1.2956351161110922 0.37905649586897533 1.0 ['ENSG00000035720|ENST00000265404|STAP1', 'STAP1|p.I238Gfs*14|1|0.19|ENSG00000035720|chr4:67590933-67590940|ACTATTGA/-|frameshift_variant'] 44257 8504 ILTRERDPS True NCI_RA007_Epitope_Rep1 1085.58292151849 1085.58182993586 37.078 2 -1.295644440258201 0.37905649586897533 1.0 ['ENSG00000179299|ENST00000381782|NSUN7'] 3103 6838 AGAQHHQLN True PC9_epitope_Rep4 974.4682261194199 974.46712993586 33.524 2 -1.2956515995886972 0.37905649586897533 1.0 ['ENSG00000141858|ENST00000533683|SAMD1', 'nc|ENSG00000141858|Q6SPF0|SAMD1'] 42373 20359 IENFSKRSIT True PC9_epitope_Rep2 1193.6404363946099 1193.6393299358601 83.733 2 -1.2956906980594673 0.37905649586897533 1.0 ['SHPRH|p.E135K|1|0.27|ENSG00000146414|chr6:145954920-145954920|C/T|missense_variant'] 122487 3717 VGSQTWSHTLS True H1975_Epitope_Rep3 1201.57275075761 1201.57111490379 19.36 3 -1.2957848524216518 0.3790883870339726 1.0 ['ENST00000482178.5_1_22:41980283-41980722:-|nuORF'] 79245 13123 PGGKKMVL True NCI_RA007_Epitope_Rep3 828.4891448047998 828.48804993586 58.897 2 -1.2958166850097614 0.37910182627845573 1.0 ['ENST00000482384.1_1_1:109756587-109756749:+|nuORF'] 89959 319 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 1.7014 3 -1.2958267307426856 0.37910182627845573 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 112222 6498 TLWPLCHT True PC9_epitope_Rep2 969.47422301665 969.47312993586 30.408 2 -1.2958484279261426 0.37910182627845573 1.0 ['nc|ENSG00000170909|Q8IYS5-2|OSCAR', 'ENSG00000170909|ENST00000358375|OSCAR', 'nc|ENSG00000170909|Q8IYS5-3|OSCAR', 'nc|ENSG00000170909|Q8IYS5-5|OSCAR', 'nc|ENSG00000170909|Q8IYS5|OSCAR', 'nc|ENSG00000170909|Q8IYS5-7|OSCAR'] 82568 5537 PVGTGGVQ True PC9_epitope_Rep3 713.37080349393 713.37025496793 26.379 1 -1.295919452826818 0.37910182627845573 1.0 ['ENSG00000204539|ENST00000376288|CDSN'] 99767 18020 SLGMDPQSRSL True PC9_epitope_Rep6 1189.57612188589 1189.57447490379 81.942 3 -1.295931922918865 0.37910182627845573 1.0 ['ENSG00000185264|ENST00000381821|TEX33'] 14414 5386 DTHLWYFVIP True NCI_RA007_Epitope_Rep3 1289.6444591458899 1289.64280490379 28.193 3 -1.2959498889241396 0.3791047681619642 1.0 ['ENSG00000146802|ENST00000312814|TMEM168'] 82602 17858 PVKKGVPM True NCI_RA007_Epitope_Rep2 854.5047948689399 854.50368993586 74.203 2 -1.2959831293610258 0.3791047681619642 1.0 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000061794|P82673-2|MRPS35', 'ENSG00000061794|ENST00000081029|MRPS35', 'MRPS35-PPFIBP1|3|fusion'] 34008 25220 GNIRRARKRKY True PC9_epitope_Rep2 1416.8538322621998 1416.85272993586 102.68 2 -1.2960136707354553 0.37912448900136264 1.0 ['ENSG00000166707|ENST00000650639|ZCCHC18'] 93425 20244 RRYRRNFNYRR True H1975_Epitope_Rep1 1655.8981566856696 1655.8970499358602 84.217 2 -1.2960805100690027 0.3791685423332887 1.0 ['ENSG00000065978|ENST00000321358|YBX1'] 39775 15903 HQDKYRFLVLP True NCI_RA007_Epitope_Rep2 1414.7721192705 1414.77102993586 66.576 2 -1.2960953979547138 0.3791714824502707 1.0 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000594090.5_1_19:50491627-50519408:-|nuORF', 'nc|ENSG00000105053|Q8IV63-3|VRK3', 'ENST00000600284.5_1_19:50490096-50500767:-|nuORF'] 4549 17813 AKVIRSLHGR True NCI_RA007_Epitope_Rep3 1135.69380938015 1135.6927099358602 78.109 2 -1.2961107367953748 0.3791714824502707 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 45630 6140 ISHKHNVP True PC9_epitope_Rep2 930.50354899898 930.50244993586 29.011 2 -1.296183080266551 0.37917442242417604 1.0 ['ENSG00000100109|ENST00000407690|TFIP11'] 22485 4196 ETHSKLQNYME True H1975_Epitope_Rep3 1378.61871497386 1378.6176099358602 21.258 2 -1.296217350847957 0.37917442242417604 1.0 ['L1PA6_dup546|chr2:49227587-49231532:-|1.9965363629475883|0.2927699401366612|2.77|502.0|47|2|sense'] 82898 19007 PVYNSRLV True PC9_epitope_Rep4 946.5236157372199 946.52250993586 81.201 2 -1.2963535510475703 0.3791941409766661 1.0 ['nc|ENSG00000137709|Q9UKI9-3|POU2F3', 'ENSG00000137709|ENST00000543440|POU2F3', 'nc|ENSG00000137709|Q9UKI9-2|POU2F3', 'ENST00000533620.5_1_11:120169092-120189098:+|nuORF', 'POU2F3|p.P359S|1|0.2|ENSG00000137709|chr11:120315367-120315367|C/T|missense_variant'] 66052 18047 LSNFIYFFE True PC9_epitope_Rep4 1178.56481184286 1178.56370993586 77.484 2 -1.2963660391798963 0.3791970802919708 1.0 ['ENST00000463943.1_1_20:49457191-49493142:+|nuORF'] 68564 9361 LTWSFFKQSF True PC9_epitope_Rep4 1289.64445914589 1289.64280490379 43.617 3 -1.296484755784215 0.3791970802919708 1.0 ['ENSG00000163933|ENST00000296292|RFT1', 'ENST00000471158.1_1_3:53137921-53154019:-|nuORF'] 103195 23500 SQPRRTKSFLN True PC9_epitope_Rep5 1332.7262317072398 1332.72457490379 95.374 3 -1.2967745247629046 0.37931412026617684 1.0 ['ENST00000509475.5_1_4:40892379-41016395:-|nuORF', 'nc|ENSG00000163697|Q92870-2|APBB2', 'nc|ENSG00000163697|Q92870|APBB2', 'ENSG00000163697|ENST00000508593|APBB2'] 93206 24108 RRRRRLWLK True PC9_epitope_Rep4 1338.8585237198197 1338.85687490379 101.23 3 -1.2968451792839535 0.3793338361597041 1.0 ['ENST00000606621.1_1_6:85472779-85472989:-|nuORF'] 61770 21977 LLKGKRKVRNK True PC9_epitope_Rep5 1338.8935718158598 1338.8924699358602 89.565 2 -1.2970138377273894 0.37935355157354356 1.0 ['ENST00000505030.5_1_5:87962937-87963072:-|nuORF'] 123912 4685 VKIPQQAE True PC9_epitope_Rep4 911.5076313199099 911.50652993586 24.557 2 -1.2970861642478029 0.37935648683170126 1.0 ['ENSG00000140854|ENST00000379661|KATNB1', 'ENST00000566611.5_1_16:57786940-57790081:+|nuORF', 'ENST00000569018.5_1_16:57789126-57789830:+|nuORF'] 74374 23791 NISVPGLQ True NCI_RA007_Epitope_Rep4 826.45486747106 826.45376993586 103.14 2 -1.297151346919095 0.37935648683170126 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'LATS1|p.G535Efs*6|1|0.37|ENSG00000131023|chr6:149683485-149683485|C/-|frameshift_variant', 'nc|ENSG00000131023|O95835-2|LATS1', 'LATS1|p.D881Gfs*40|1|0.26|ENSG00000131023|chr6:149676689-149676690|-/C|frameshift_variant', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF'] 85984 10856 QPGPVGVGTF True H1975_Epitope_Rep1 957.4919812557699 957.49088993586 46.717 2 -1.2972757872034408 0.3794005303749118 1.0 ['ENST00000372530.8_2_6:43395757-43400350:+|nuORF'] 79486 8850 PGPSLAGK True PC9_epitope_Rep3 725.40718900265 725.4066449679301 38.993 1 -1.2973361112656892 0.37941394703871745 1.0 ['ENSG00000260220|ENST00000638797|CCDC187'] 14879 13867 DYGPFRDVP True H1975_Epitope_Rep3 1064.49270953176 1064.4916099358602 58.648 2 -1.2973404807236133 0.37941394703871745 1.0 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 43760 5200 IIWYYFPS True PC9_epitope_Rep1 1087.5378688190299 1087.53676993586 24.852 2 -1.2974477032158749 0.37941394703871745 1.0 ['nc|ENSG00000185737|P56975-3|NRG3'] 90217 21587 RHKRRRRKH True PC9_epitope_Rep6 1328.8238695465998 1328.8227699358602 95.911 2 -1.297461121394307 0.37941394703871745 1.0 ['DVL3|p.Q224H|1|0.1|ENSG00000161202|chr3:184165185-184165185|G/C|missense_variant'] 69937 24086 LYDVRRRPWYI True PC9_epitope_Rep5 1535.83611650939 1535.8350099358602 97.63 2 -1.2974893752773056 0.37941394703871745 1.0 ['nc|ENSG00000153956|P54289-3|CACNA2D1', 'ENSG00000153956|ENST00000356860|CACNA2D1', 'nc|ENSG00000153956|P54289-4|CACNA2D1', 'nc|ENSG00000153956|P54289-5|CACNA2D1', 'nc|ENSG00000153956|P54289|CACNA2D1', 'ENST00000461275.1_1_7:81680257-81714133:-|nuORF', 'nc|ENSG00000007402|Q9NY47-4|CACNA2D2', 'ENSG00000007402|ENST00000424201|CACNA2D2', 'nc|ENSG00000007402|Q9NY47-3|CACNA2D2', 'nc|ENSG00000007402|Q9NY47|CACNA2D2', 'nc|ENSG00000007402|Q9NY47-5|CACNA2D2'] 84330 18428 QFPHPFLPNID True PC9_epitope_Rep6 1323.6611718391898 1323.66006993586 83.527 2 -1.2975788496875083 0.3794458229942101 1.0 ['ENSG00000135226|ENST00000335568|UGT2B28', 'nc|ENSG00000135226|Q9BY64-2|UGT2B28'] 62338 18517 LLRHRLKTHTT True NCI_RA007_Epitope_Rep4 1374.82080079842 1374.8191649037901 80.139 3 -1.2976506116116782 0.3794776981742547 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1', 'ENST00000549395.1_1_12:51450168-51451905:+|nuORF', 'ENST00000380135.7_1_12:51450138-51451833:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-5|LETMD1', 'ENST00000546814.1_1_12:51450084-51453211:+|nuORF', 'ENST00000552433.1_1_12:51449776-51450294:+|nuORF', 'ENST00000548516.5_1_12:51450138-51453211:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-4|LETMD1'] 103498 11527 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 50.99 2 -1.2977035436065123 0.3794974092003795 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 23462 7315 EVWWAGDH True PC9_epitope_Rep3 998.4246299719398 998.42352993586 33.143 2 -1.2977541423669763 0.37952928297755884 1.0 ['ENST00000592992.1_1_19:38895920-38896347:+|nuORF'] 26310 12266 FIDVSKIK True NCI_RA007_Epitope_Rep1 948.56441792004 948.56332993586 51.683 2 -1.2977945929916037 0.37954899289675975 1.0 ['ENSG00000135605|ENST00000381501|TEC'] 138090 9745 YQEYLKQVP True NCI_RA007_Epitope_Rep2 1166.5971746003 1166.5960699358602 42.527 2 -1.2978579982539886 0.37955192293658324 1.0 ['ENSG00000102786|ENST00000311234|INTS6', 'nc|ENSG00000102786|Q9UL03-3|INTS6'] 15640 9012 EAWRQNCAW True H1975_Epitope_Rep2 1162.49781199554 1162.49670993586 39.616 2 -1.2978929515923534 0.37955192293658324 1.0 ['ENST00000295101.2_1_2:155554859-155555222:+|nuORF'] 81077 20750 PPFALSSS True PC9_epitope_Rep4 804.4017692690401 804.40066993586 87.971 2 -1.2979736142653264 0.3795716318612486 1.0 ['ENST00000553497.1_1_14:70082246-70082456:+|nuORF'] 131198 23525 VVPIEVLPTV True PC9_epitope_Rep6 1064.648147544 1064.64757496793 103.63 1 -1.2980137952964956 0.3795913403064948 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 7707 8875 ASQQQVEVYKI True H1975_Epitope_Rep3 1291.67721582615 1291.67610993586 39.138 2 -1.2981182140370917 0.37961859356376637 1.0 ['ENSG00000135968|ENST00000309863|GCC2'] 82605 20108 PVKKGVPM True PC9_epitope_Rep6 854.5047948689399 854.50368993586 90.02 2 -1.2981624529562732 0.37961859356376637 1.0 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000061794|P82673-2|MRPS35', 'ENSG00000061794|ENST00000081029|MRPS35', 'MRPS35-PPFIBP1|3|fusion'] 5797 7177 APFFLHLV True PC9_epitope_Rep2 942.5327238689398 942.53162993586 32.998 2 -1.2981999317617412 0.37961938347418983 1.0 ['ENSG00000124089|ENST00000243911|MC3R'] 23051 8509 EVKTLNDSLK True H1975_Epitope_Rep1 1145.62920300457 1145.62810993586 37.66 2 -1.2982109244718605 0.37961938347418983 1.0 ['ENSG00000135205|ENST00000285871|CCDC146', 'nc|ENSG00000135205|Q8IYE0-2|CCDC146'] 12493 8893 DKYRDQYNWFF True NCI_RA007_Epitope_Rep4 1580.7048275563195 1580.70372993586 41.032 2 -1.298218763656524 0.37961938347418983 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 25760 14510 FFRLFRSTVK True H1975_Epitope_Rep1 1299.74517624667 1299.74353490379 61.015 3 -1.298234990245048 0.37961938347418983 1.0 ['nc|ENSG00000106366|P05121-2|SERPINE1', 'ENSG00000106366|ENST00000223095|SERPINE1'] 18892 8089 ELELQRVSA True PC9_epitope_Rep6 1043.56112344475 1043.56002993586 40.625 2 -1.2982829729472622 0.37961938347418983 1.0 ['ENST00000440783.2_1_16:46918774-46919059:+|nuORF'] 32404 24326 GGGGGGGD True H1975_Epitope_Rep3 532.1877537515201 532.18720496793 101.3 1 -1.2982999650759657 0.37961938347418983 1.0 ['ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'ENSG00000120093|ENST00000498678|HOXB3', 'TRA2A|p.G231D|1|0.26|ENSG00000164548|chr7:23506216-23506216|C/T|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'nc|ENSG00000120093|P14651-2|HOXB3', 'ENSG00000206418|ENST00000649141|RAB12', 'ENST00000470900.1_1_3:51422898-51423054:+|nuORF', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ENSG00000198455|ENST00000374888|ZXDB'] 12091 11104 DIFGCVADIG True PC9_epitope_Rep3 1008.4586325221599 1008.4580749679301 47.709 1 -1.2983420999978434 0.37961938347418983 1.0 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 126744 7512 VPSDYRVK True PC9_epitope_Rep3 962.5185303567799 962.51742993586 33.898 2 -1.298370904693993 0.37961938347418983 1.0 ['ENSG00000149218|ENST00000278505|ENDOD1'] 126213 17397 VPGSLRSMEI True PC9_epitope_Rep6 1087.56957995347 1087.56848993586 79.533 2 -1.298449039522978 0.37961938347418983 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 100398 11622 SLNREYTF True NCI_RA007_Epitope_Rep3 1028.49270953176 1028.4916099358602 52.836 2 -1.2984505823648245 0.37961938347418983 1.0 ['ENST00000378797.6_2_13:46916808-46917036:-|nuORF'] 15110 5440 EADVFAGSIQP True H1975_Epitope_Rep3 1132.540053647 1132.53894993586 25.984 2 -1.298454170334577 0.37961938347418983 1.0 ['ENSG00000074276|ENST00000261944|CDHR2'] 29166 18786 FTWKLLIE True PC9_epitope_Rep6 1048.59571804832 1048.5946299358602 84.902 2 -1.2984598087131263 0.37961938347418983 1.0 ['ENSG00000204010|ENST00000371809|IFIT1B'] 134284 948 WRSLGPPG True NCI_RA007_Epitope_Rep1 868.4555361773998 868.45442993586 5.0135 2 -1.2984616913025309 0.37961938347418983 1.0 ['ENST00000269280.8_2_17:5487188-5487734:-|nuORF'] 3090 11677 AGAIIYTSRFQ True PC9_epitope_Rep4 1225.6455217750502 1225.64386490379 52.678 3 -1.2986906578868025 0.3796634077532954 1.0 ['ENSG00000178921|ENST00000314666|PFAS'] 89958 255 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 1.365 3 -1.2987628617806912 0.3796906539555923 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 90574 24831 RKHERRHI True NCI_RA007_Epitope_Rep5 1130.6533415504998 1130.65224993586 103.0 2 -1.2987712527859598 0.3796906539555923 1.0 ['ENSG00000130940|ENST00000377022|CASZ1', 'nc|ENSG00000130940|Q86V15-2|CASZ1', 'CASZ1|p.H688Q|1|0.23|ENSG00000130940|chr1:10653993-10653993|G/C|missense_variant', 'CASZ1|p.I804Yfs*73|1|0.28|ENSG00000130940|chr1:10653648-10653648|G/-|frameshift_variant', 'ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 60063 25404 LHSKLISGG True PC9_epitope_Rep3 910.52361573722 910.52250993586 103.15 2 -1.2988525531446382 0.3796994309615291 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 121134 8449 VGGGGGGP True H1975_Epitope_Rep1 556.2605247689601 556.25997496793 37.427 1 -1.2988654057563314 0.3796994309615291 1.0 ['ENSG00000134780|ENST00000257215|DAGLA', 'DAGLA|p.E881Q|1|0.13|ENSG00000134780|chr11:61744001-61744001|G/C|missense_variant'] 119429 4994 VEPHSPSPSSK True NCI_RA007_Epitope_Rep5 1150.56185172074 1150.56074993586 25.913 2 -1.2989009082175256 0.3796994309615291 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 111762 20476 TLQLYNSVK True PC9_epitope_Rep1 1064.5866099165999 1064.58550993586 83.573 2 -1.2990053832719533 0.3796994309615291 1.0 ['nc|ENSG00000096996|P42701-2|IL12RB1', 'ENSG00000096996|ENST00000593993|IL12RB1', 'nc|ENSG00000096996|P42701-3|IL12RB1', 'IL12RB1|p.P391Rfs*64|1|0.93|ENSG00000096996|chr19:18069563-18069563|G/-|frameshift_variant'] 36155 22238 GVFFLFFG True PC9_epitope_Rep6 932.4796256669198 932.47907496793 98.495 1 -1.2990309424558015 0.3796994309615291 1.0 ['ENST00000545113.1_1_12:21654752-21659919:+|nuORF', 'ENST00000545093.5_1_12:21654752-21665258:+|nuORF', 'ENSG00000111711|ENST00000229314|GOLT1B'] 52485 17444 KPLPVSLHVR True H1975_Epitope_Rep1 1144.70806246196 1144.70747496793 72.583 1 -1.2990399833490438 0.3796994309615291 1.0 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'SMPD4|p.K500Sfs*21|2|0.35|ENSG00000136699|chr2:130155169-130155169|G/-|frameshift_variant', 'ENST00000415574.6_1_2:132250659-132263934:+|nuORF'] 33049 23191 GKCKKKKRRRK True PC9_epitope_Rep5 1414.9143243437795 1414.91322993586 94.185 2 -1.2991207599027002 0.37971913186211925 1.0 ['ENST00000406027.2_1_2:216946734-216946833:+|nuORF'] 122453 4859 VGSLRTVD True NCI_RA007_Epitope_Rep1 845.46068112749 845.45958993586 22.981 2 -1.2991722398385102 0.3797266736376237 1.0 ['ENST00000538037.5_1_12:132413837-132416751:+|nuORF'] 45427 8003 ISDVNKNGSI True PC9_epitope_Rep1 1045.54038800017 1045.53928993586 35.604 2 -1.299211733541812 0.3797492978638038 1.0 ['ENSG00000160908|ENST00000337673|ZNF394'] 4554 18777 AKVIRSLHGR True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 79.06 2 -1.2992374170790408 0.3797492978638038 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 78266 7615 PARNFTLP True PC9_epitope_Rep6 914.4974009893799 914.49630993586 38.577 2 -1.2992377822449586 0.3797492978638038 1.0 ['ENSG00000162878|ENST00000294964|PKDCC'] 58365 9132 LEVHFVEHYRE True H1975_Epitope_Rep3 1456.70991293676 1456.70880993586 40.115 2 -1.2993365110692123 0.37975806941827245 1.0 ['nc|ENSG00000196365|P36776-2|LONP1', 'ENSG00000196365|ENST00000360614|LONP1', 'ENST00000590558.5_1_19:5692045-5712033:-|nuORF', 'nc|ENSG00000196365|P36776-3|LONP1', 'ENST00000587552.5_1_19:5692045-5696439:-|nuORF'] 34101 3535 GPAKMRRYR True NCI_RA007_Epitope_Rep2 1133.6240155681699 1133.6229099358602 18.401 2 -1.29934563977581 0.37975806941827245 1.0 ['ENST00000558518.5_1_19:11221397-11222199:+|nuORF'] 90983 10435 RLIFSKAKP True NCI_RA007_Epitope_Rep5 1058.66004964038 1058.6589499358602 46.768 2 -1.299352785199244 0.37975806941827245 1.0 ['nc|ENSG00000138764|Q16589-2|CCNG2', 'ENSG00000138764|ENST00000316355|CCNG2', 'ENST00000497512.5_1_4:78078410-78106259:+|nuORF'] 5269 13017 ALRFLPLSL True PC9_epitope_Rep1 1028.6382515666398 1028.6371499358602 54.94 2 -1.2993657768123563 0.37975806941827245 1.0 ['ENST00000239944.6_1_3:150264054-150264312:-|nuORF'] 60947 11961 LLAARLLEAP True H1975_Epitope_Rep3 1065.65462990677 1065.6535299358602 51.166 2 -1.2994125730632833 0.37975806941827245 1.0 ['ENSG00000235098|ENST00000537107|ANKRD65'] 116644 17807 TYILRWTVELI True PC9_epitope_Rep6 1405.79693703601 1405.79530490379 81.127 3 -1.299478260130545 0.37975806941827245 1.0 ['nc|ENSG00000001497|Q9Y4W2-2|LAS1L', 'ENSG00000001497|ENST00000374811|LAS1L', 'nc|ENSG00000001497|Q9Y4W2-3|LAS1L', 'ENST00000484069.1_1_X:64743438-64749476:-|nuORF'] 86422 20500 QQQIFHFPTL True NCI_RA007_Epitope_Rep5 1257.65060715549 1257.64897490379 85.798 3 -1.299508707051714 0.3797639164103624 1.0 ['ZBBX|p.P633Lfs*57|1|0.26|ENSG00000169064|chr3:167282477-167282477|G/-|frameshift_variant'] 129895 8485 VTLTQKII True NCI_RA007_Epitope_Rep3 914.5800679841799 914.57896993586 40.451 2 -1.299529151490217 0.3797639164103624 1.0 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81', 'nc|ENSG00000167716|Q562E7-2|WDR81', 'nc|ENSG00000167716|Q562E7-6|WDR81', 'nc|ENSG00000167716|Q562E7-5|WDR81', 'nc|ENSG00000167716|Q562E7-3|WDR81', 'ENST00000464528.5_1_17:1630890-1639119:+|nuORF'] 36175 11937 GVFLFIFF True NCI_RA007_Epitope_Rep3 988.5422259234799 988.54112993586 54.081 2 -1.2995314926186812 0.3797639164103624 1.0 ['ENST00000275732.5_1_7:100279067-100279163:-|nuORF'] 15680 3545 ECRRERRWDRW True NCI_RA007_Epitope_Rep2 1646.7960596858998 1646.79385987172 18.441 4 -1.2995340507842161 0.3797639164103624 1.0 ['ENST00000565219.1_1_16:29466524-29469442:+|nuORF'] 124151 24781 VKVPQLAL True PC9_epitope_Rep4 866.5589386167799 866.55784993586 103.82 2 -1.2995671977052874 0.3797697628338378 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 121842 6533 VGNQLIPQ True PC9_epitope_Rep5 867.48141657207 867.48030993586 30.102 2 -1.2995845667682293 0.3797697628338378 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000519559.1_1_8:52732913-52752014:-|nuORF', 'nc|ENSG00000168300|Q96MG8-2|PCMTD1'] 61902 5683 LLLKRIARV True PC9_epitope_Rep2 1080.74953335112 1080.74842993586 27.248 2 -1.299662380891363 0.3797697628338378 1.0 ['ENST00000269445.10_1_18:46570279-46570333:-|nuORF'] 91337 24290 RMKPAGSV True NCI_RA007_Epitope_Rep5 844.4589073056799 844.45780993586 100.86 2 -1.2996747932954609 0.3797697628338378 1.0 ['nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'ENST00000555848.1_1_14:100607475-100610072:+|nuORF', 'ENST00000553694.5_1_14:100603907-100610072:+|nuORF'] 78784 6883 PEKSSGDVP True H1975_Epitope_Rep2 914.4345259492999 914.43342993586 31.396 2 -1.2997890404807833 0.3798016143148886 1.0 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C', 'ENST00000471157.2_1_11:2905236-2905503:-|nuORF'] 99875 12038 SLHIREFTL True PC9_epitope_Rep2 1114.6134933707801 1114.6123899358602 51.621 2 -1.29981436431245 0.3798028418967047 1.0 ['ENST00000435989.6_1_19:58384023-58384878:-|nuORF'] 60062 25587 LHSKLISGG True PC9_epitope_Rep3 910.52361573722 910.52250993586 103.91 2 -1.2998215539634908 0.3798028418967047 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 30286 24643 GAAQAPWP True PC9_epitope_Rep5 796.3867879112399 796.38568993586 99.915 2 -1.2998726383774277 0.3798028418967047 1.0 ['CCDC61|p.G102Afs*19|1|0.29|ENSG00000104983|chr19:46006627-46006627|G/-|frameshift_variant'] 119287 11519 VELKPHDVR True PC9_epitope_Rep4 1091.60874234351 1091.60764993586 52.07 2 -1.2998777384792988 0.3798028418967047 1.0 ['ENSG00000119973|ENST00000239032|PRLHR'] 96158 7279 SEEEIRQK True NCI_RA007_Epitope_Rep1 1017.5090878718898 1017.50798993586 32.305 2 -1.2999113745581292 0.3798028418967047 1.0 ['ENSG00000177679|ENST00000611745|SRRM3', 'nc|ENSG00000177679|A6NNA2|SRRM3', 'SRRM3|p.A145Pfs*62|1|0.56|ENSG00000177679|chr7:76260002-76260002|G/-|frameshift_variant'] 63488 10129 LPHRGKDP True PC9_epitope_Rep2 918.5035489989799 918.50244993586 44.299 2 -1.300091939011727 0.37985900085085694 1.0 ['ENSG00000222046|ENST00000409358|DCDC2B'] 41341 9774 IALIRAEAA True H1975_Epitope_Rep3 926.5549158654999 926.55380993586 42.618 2 -1.3001538869293434 0.3798786935858322 1.0 ['nc|ENSG00000187778|Q96EZ8-3|MCRS1', 'ENSG00000187778|ENST00000343810|MCRS1', 'nc|ENSG00000187778|Q96EZ8-2|MCRS1', 'nc|ENSG00000187778|Q96EZ8-4|MCRS1', 'ENST00000552596.1_1_12:49952428-49952862:-|nuORF', 'ENST00000548646.5_1_12:49952428-49953240:-|nuORF'] 77763 4850 PAASPDTAAW True NCI_RA007_Epitope_Rep5 985.4505103666099 985.44940993586 25.348 2 -1.3001841839527501 0.37988161365210943 1.0 ['ENST00000587411.5_1_19:5925055-5932565:-|nuORF', 'RANBP3|p.L337Ifs*20|1|0.12|ENSG00000031823|chr19:5923906-5923907|-/G|frameshift_variant', 'ENST00000586344.5_1_19:5917623-5933521:-|nuORF', 'nc|ENSG00000031823|Q9H6Z4-3|RANBP3', 'ENST00000592771.5_1_19:5917623-5941693:-|nuORF', 'nc|ENSG00000031823|Q9H6Z4-2|RANBP3', 'ENSG00000031823|ENST00000340578|RANBP3'] 56249 19445 LDQARKELV True PC9_epitope_Rep5 1070.60840799034 1070.60730993586 79.846 2 -1.300201386402049 0.37988161365210943 1.0 ['nc|ENSG00000160323|Q76LX8-3|ADAMTS13', 'ENSG00000160323|ENST00000355699|ADAMTS13', 'nc|ENSG00000160323|Q76LX8|ADAMTS13'] 122944 3886 VGVWTPAG True NCI_RA007_Epitope_Rep5 785.4071890026498 785.40608993586 21.226 2 -1.3002219390716712 0.3798920705916671 1.0 ['ENST00000466942.2_1_10:77161903-77167502:+|nuORF'] 117373 8766 VAAVVRWI True H1975_Epitope_Rep2 912.5545219426799 912.55342993586 38.683 2 -1.3002618349829798 0.3798920705916671 1.0 ['nc|ENSG00000140326|Q8IWY9-1|CDAN1', 'ENSG00000140326|ENST00000356231|CDAN1'] 45963 4829 ISSQLVMLLEW True NCI_RA007_Epitope_Rep5 1317.7002597698497 1317.69862490379 25.265 3 -1.3002678382577102 0.3798920705916671 1.0 ['ENSG00000026652|ENST00000320285|AGPAT4'] 60240 10012 LIDRSSAP True PC9_epitope_Rep1 857.4606811274899 857.45958993586 43.377 2 -1.3003523816919955 0.37992391555355687 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2'] 125139 10611 VLPSGRPR True NCI_RA007_Epitope_Rep4 880.52428444356 880.52318993586 47.658 2 -1.3004509346189868 0.3799268343076605 1.0 ['ENST00000529943.6_1_16:31724582-31724693:+|nuORF'] 68260 4918 LTRFVKWPHY True H1975_Epitope_Rep2 1345.72952618253 1345.72789490379 23.999 3 -1.300456591597158 0.3799268343076605 1.0 ['ENST00000444895.1_1_9:20532627-20532768:+|nuORF'] 27260 10371 FLWMLKDFK True PC9_epitope_Rep2 1226.6521873786198 1226.65054490379 45.217 3 -1.3005291009833666 0.3799540598680133 1.0 ['ENSG00000169402|ENST00000404077|RSPH10B2', 'ENSG00000155026|ENST00000404406|RSPH10B'] 41697 21045 IDLGQTLAHRW True H1975_Epitope_Rep3 1308.6938689498 1308.69276993586 87.9 2 -1.3005333366386658 0.3799540598680133 1.0 ['ENST00000473996.1_1_3:48454981-48455344:-|nuORF'] 104667 6303 STAAQHPD True PC9_epitope_Rep5 825.36169536221 825.36058993586 29.219 2 -1.300584830935023 0.37996159548868524 1.0 ['nc|ENSG00000108846|O15438-3|ABCC3'] 129244 7940 VTDNKIQINAK True NCI_RA007_Epitope_Rep2 1242.6932002434598 1242.6921099358601 35.516 2 -1.3006159662006345 0.3799645131495795 1.0 ['ENSG00000165506|ENST00000298292|DNAAF2'] 121499 7511 VGKGHPPP True PC9_epitope_Rep1 787.4340724568299 787.43296993586 33.71 2 -1.3006309134971095 0.3799645131495795 1.0 ['ENST00000436054.1_1_9:74920469-74956553:+|nuORF'] 138204 10518 YQRRRKYSL True NCI_RA007_Epitope_Rep4 1268.7101877202797 1268.7090899358602 47.305 2 -1.3007967898855637 0.38002065990156164 1.0 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF', 'MYOF|p.N825Tfs*12|1|0.16|ENSG00000138119|chr10:93369760-93369760|T/-|frameshift_variant'] 62353 23528 LLRLHKEP True PC9_epitope_Rep1 1004.6130994479599 1004.61200993586 95.289 2 -1.300830879685856 0.38003864429024536 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'nc|ENSG00000173821|Q63HN8-6|RNF213', 'ENST00000427003.7_1_17:78356226-78367295:+|nuORF', 'ENST00000411702.7_1_17:78356744-78367295:+|nuORF', 'ENST00000560083.1_1_17:78362921-78367295:+|nuORF'] 42023 12984 IEDVAHRML True PC9_epitope_Rep1 1082.5542642425 1082.55316993586 54.814 2 -1.3008389956518454 0.38003864429024536 1.0 ['ENSG00000092094|ENST00000206542|OSGEP', 'ENST00000555656.5_1_14:20915401-20917107:-|nuORF', 'ENST00000556124.3_1_14:20916255-20917133:-|nuORF'] 26604 23367 FKKKAHKL True PC9_epitope_Rep6 998.6389202729798 998.6378299358599 102.99 2 -1.3008499294604514 0.38003864429024536 1.0 ['ENSG00000117501|ENST00000367759|MROH9'] 59939 13457 LHLGVIGSALA True PC9_epitope_Rep5 1049.62332977849 1049.62222993586 56.779 2 -1.3008773754045875 0.38003864429024536 1.0 ['ENSG00000142494|ENST00000270570|SLC47A1', 'nc|ENSG00000142494|Q96FL8-3|SLC47A1', 'nc|ENSG00000142494|Q96FL8-2|SLC47A1', 'ENST00000497548.5_1_17:19437252-19459239:+|nuORF'] 41897 10353 IDYEKMVDHR True H1975_Epitope_Rep1 1304.6183210510399 1304.61722993586 44.77 2 -1.300917548078501 0.3800583302952971 1.0 ['AASS|p.D834Rfs*21|1|0.27|ENSG00000008311|chr7:122078000-122078001|-/T|frameshift_variant', 'ENSG00000008311|ENST00000417368|AASS'] 82952 303 PWRVFLKLL True PC9_epitope_Rep3 1170.72773527738 1170.72607490379 1.7031 3 -1.3009787744677954 0.3800780158219003 1.0 ['ENST00000552957.5_1_14:29242013-29247346:+|nuORF'] 134832 12815 WYWRRTLGMQV True H1975_Epitope_Rep1 1494.75542366054 1494.7543299358601 54.357 2 -1.3010025837479138 0.3800855490205609 1.0 ['ENSG00000163686|ENST00000478253|ABHD6'] 57687 24412 LEMTVWVPKL True PC9_epitope_Rep2 1214.67331674602 1214.67220993586 99.47 2 -1.3010636720835602 0.3800930820361392 1.0 ['ENSG00000181291|ENST00000631683|TMEM132E'] 15532 3753 EARWKPCMRFY True H1975_Epitope_Rep3 1485.7009455595298 1485.6992849037902 19.514 3 -1.3011254989093994 0.38010352872557596 1.0 ['nc|ENSG00000168061|A6NKF1-2|SAC3D1', 'ENST00000530213.5_1_11:64808530-64811777:+|nuORF'] 53561 22800 KVRQRWQWGL True PC9_epitope_Rep4 1355.7574722658699 1355.75581490379 95.921 3 -1.3011347734798175 0.38010352872557596 1.0 ['ENST00000482172.5_1_13:21205203-21245170:+|nuORF'] 126056 5033 VPASQGPTNP True PC9_epitope_Rep1 966.4770594676199 966.47596993586 24.218 2 -1.301155727641335 0.38010352872557596 1.0 ['ENSG00000205143|ENST00000378909|ARID3C'] 61785 2764 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 14.2 2 -1.3012123481475917 0.38011106115654275 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 137806 8894 YPEPRTQWRNE True H1975_Epitope_Rep3 1474.69532550178 1474.6942299358602 39.208 2 -1.3013229658748868 0.38015042710117986 1.0 ['ENST00000416543.5_1_4:106629178-106629382:-|nuORF'] 63232 16458 LPAAGRRA True NCI_RA007_Epitope_Rep2 810.48241963158 810.48187496793 68.746 1 -1.3013229977021292 0.38015042710117986 1.0 ['ENST00000586220.1_1_19:28284944-28285022:+|nuORF'] 60064 25634 LHSKLISGG True PC9_epitope_Rep5 910.52361573722 910.52250993586 103.94 2 -1.3013630265837262 0.38015795868772784 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 80157 23053 PKSLRSVRRRE True PC9_epitope_Rep4 1382.8218634275802 1382.82022490379 96.895 3 -1.3014623671131147 0.38018979113255 1.0 ['ENST00000175091.4_1_2:20251387-20251465:-|nuORF'] 129483 6043 VTESQFLKRN True PC9_epitope_Rep5 1220.6513354314798 1220.6496749037901 28.237 3 -1.3016112071758235 0.38028237466890236 1.0 ['nc|ENSG00000033122|Q96NW7-2|LRRC7', 'nc|ENSG00000033122|Q96NW7|LRRC7', 'ENSG00000033122|ENST00000651989|LRRC7', 'LRRC7|p.T1197I|1|0.12|ENSG00000033122|chr1:70039414-70039414|C/T|missense_variant'] 3303 6309 AGGLKELE True PC9_epitope_Rep1 815.4388830537499 815.43778993586 29.081 2 -1.3017024509841058 0.3803142048284996 1.0 ['nc|ENSG00000142186|Q96KG9-3|SCYL1', 'nc|ENSG00000142186|Q96KG9-4|SCYL1', 'nc|ENSG00000142186|Q96KG9-2|SCYL1', 'ENSG00000142186|ENST00000270176|SCYL1', 'nc|ENSG00000142186|Q96KG9-5|SCYL1', 'nc|ENSG00000142186|Q96KG9-6|SCYL1'] 97384 24134 SGCGGSAA True H1975_Epitope_Rep3 608.22242500808 608.22187496793 100.56 1 -1.3017931831594407 0.380346034214619 1.0 ['ENST00000566637.5_1_16:88780822-88781656:+|nuORF'] 91451 23740 RNQRFLRA True PC9_epitope_Rep4 1059.6049943757498 1059.60388993586 99.692 2 -1.301844421630863 0.38037443355080125 1.0 ['chr1:160353237-160354223|104|26.75|0.66|5.34|+|0|NCSTN,NCSTN|1'] 5879 8672 APGRLEMPP True H1975_Epitope_Rep1 966.4956867372199 966.49458993586 38.286 2 -1.3018480462892572 0.38037443355080125 1.0 ['ENST00000376350.7_2_19:55715404-55716852:-|nuORF'] 38942 8348 HIQKEDVP True PC9_epitope_Rep3 964.4977949121999 964.49668993586 37.08 2 -1.301852891182297 0.38037443355080125 1.0 ['CON__P02662'] 34264 4748 GPLEHVVLGNA True NCI_RA007_Epitope_Rep1 1104.5927579262 1104.5916699358602 22.549 2 -1.3018860121766043 0.38037443355080125 1.0 ['ENST00000416600.6_1_20:3846990-3847266:+|nuORF'] 63553 13390 LPLASTSK True H1975_Epitope_Rep1 815.4752685624701 815.47472496793 56.615 1 -1.3019116843419654 0.38037443355080125 1.0 ['ENSG00000138592|ENST00000307179|USP8', 'nc|ENSG00000138592|P40818-2|USP8', 'ENST00000419830.2_1_15:50786258-50791282:+|nuORF'] 125765 10066 VNIPVLKVRKE True NCI_RA007_Epitope_Rep4 1293.8132558064901 1293.81160490379 45.564 3 -1.3019369699425687 0.38037443355080125 1.0 ['ENSG00000126814|ENST00000261249|TRMT5'] 57716 12086 LENKEAPWKMR True NCI_RA007_Epitope_Rep1 1400.7234548259198 1400.7223499358602 50.998 2 -1.3019429337771702 0.38037443355080125 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'RALGAPA1|p.C1295Lfs*2|1|0.4|ENSG00000174373|chr14:35655901-35655902|-/A|frameshift_variant'] 81207 19925 PPLMLIIF True NCI_RA007_Epitope_Rep2 942.5612471159 942.56014993586 82.503 2 -1.301966915071348 0.38040625911167264 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 70832 24819 MEFVRMKG True NCI_RA007_Epitope_Rep1 996.4884931817999 996.48738993586 102.74 2 -1.3019894704693926 0.3804259351499763 1.0 ['nc|ENSG00000100364|Q6ICG6-3|KIAA0930', 'ENSG00000100364|ENST00000336156|KIAA0930', 'nc|ENSG00000100364|Q6ICG6-2|KIAA0930'] 68111 13210 LTPELLKILHS True H1975_Epitope_Rep1 1262.7598232512998 1262.7587299358602 55.909 2 -1.3020867963375602 0.38049420511699106 1.0 ['ENST00000510450.1_1_3:125688183-125696014:+|nuORF', 'ENSG00000114547|ENST00000514116|ROPN1B', 'ENSG00000065371|ENST00000405845|ROPN1'] 61784 2695 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 13.864 2 -1.3021519222030824 0.3805046345226381 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 28244 14446 FRTEDWDWYRK True H1975_Epitope_Rep1 1600.7422756941999 1600.7411699358602 60.763 2 -1.3022132626848733 0.3805046345226381 1.0 ['SLFN13|p.G678W|1|0.25|ENSG00000154760|chr17:35441257-35441257|C/A|missense_variant'] 83663 7611 QEAHWVLCEVL True NCI_RA007_Epitope_Rep1 1325.6438075228898 1325.64217490379 33.597 3 -1.302249049676514 0.3805046345226381 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 63380 11071 LPFLPGEQHP True NCI_RA007_Epitope_Rep2 1133.58694426977 1133.58584993586 47.653 2 -1.3022891816157522 0.3805121601593819 1.0 ['ENSG00000204406|ENST00000642680|MBD5', 'nc|ENSG00000204406|Q9P267|MBD5'] 120901 6430 VGEAEEEYE True PC9_epitope_Rep4 1053.41385007437 1053.4127499358601 31.828 2 -1.3024067089679194 0.3805196856132849 1.0 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15'] 90527 18922 RKEKAKIHYWK True NCI_RA007_Epitope_Rep4 1485.8568519539697 1485.85519490379 81.821 3 -1.302584434063361 0.38052258840393094 1.0 ['nc|ENSG00000293056|Q6NVV1|RPL13AP3'] 23435 16084 EVVWRPRRRK True H1975_Epitope_Rep3 1380.8214695047598 1380.82036993586 67.326 2 -1.3025908292723947 0.38052258840393094 1.0 ['ENST00000524481.5_1_6:128321419-128841710:-|nuORF', 'ENST00000368202.4_1_6:128840173-128841710:-|nuORF'] 98807 5837 SITFLYEIY True H1975_Epitope_Rep2 1147.58012755383 1147.5784949037902 27.443 3 -1.3026350550356047 0.3805301134569131 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7', 'CHD7|p.R1548Gfs*11|1|0.18|ENSG00000171316|chr8:60841749-60841749|G/-|frameshift_variant'] 19368 5124 ELNKPPLGP True H1975_Epitope_Rep1 963.5389314481898 963.53782993586 24.779 2 -1.3027182605244174 0.38055731014042077 1.0 ['ENST00000265085.9_1_5:173315710-173315878:+|nuORF'] 73314 16359 NELDRYHRIIE True PC9_epitope_Rep5 1456.7422756941999 1456.7411699358602 67.922 2 -1.3027543366776544 0.38055731014042077 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 54884 6795 LAGLEAHT True PC9_epitope_Rep4 810.4235673427801 810.42246993586 33.347 2 -1.3029328878698498 0.38056021184073074 1.0 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A'] 40079 4578 HRAWPWEHVYM True H1975_Epitope_Rep2 1510.69282340398 1510.69117490379 22.713 3 -1.3029349670177106 0.38056021184073074 1.0 ['ENST00000593581.5_1_19:8439309-8454924:-|nuORF', 'ENST00000597785.1_1_19:8439309-8454924:-|nuORF'] 4555 18967 AKVIRSLHGR True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 79.794 2 -1.3029734102534567 0.38056311340005833 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 108624 10065 TEKADIKPV True PC9_epitope_Rep2 999.5600608155898 999.55896993586 44.046 2 -1.30300192058167 0.38056311340005833 1.0 ['ENST00000582655.5_1_17:27237828-27251299:-|nuORF', 'nc|ENSG00000109118|Q96QT6-2|PHF12', 'ENST00000582436.5_1_17:27237055-27251401:-|nuORF', 'nc|ENSG00000109118|Q96QT6-5|PHF12', 'nc|ENSG00000109118|Q96QT6-3|PHF12', 'ENSG00000109118|ENST00000332830|PHF12', 'nc|ENSG00000109118|Q96QT6-4|PHF12'] 33753 12675 GLSHPFSI True PC9_epitope_Rep1 856.44430278736 856.44320993586 53.626 2 -1.303068417735134 0.38056891609580723 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000556356.1_1_12:57602422-57606335:+|nuORF'] 15382 23237 EALQAAFLKMK True PC9_epitope_Rep5 1248.6900294393197 1248.6889299358602 94.365 2 -1.3030796932369537 0.38056891609580723 1.0 ['nc|ENSG00000293412|O75343|GUCY1B2'] 97509 8877 SGPPLKAG True PC9_epitope_Rep1 725.40718900265 725.4066449679301 38.984 1 -1.3030804895039676 0.38056891609580723 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000508497.5_1_4:17579055-17583440:+|nuORF', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 26484 4131 FIQQNLSG True NCI_RA007_Epitope_Rep2 905.4606811274899 905.45958993586 20.707 2 -1.303176173366128 0.38056891609580723 1.0 ['ENST00000557380.5_1_14:50318303-50318570:-|nuORF'] 79222 19797 PGGGFGGG True NCI_RA007_Epitope_Rep5 604.26052476896 604.25997496793 83.06 1 -1.3032808954636006 0.38058396288289165 1.0 ['CON__Q6IFZ6'] 17642 9104 EHQKKVRKM True H1975_Epitope_Rep2 1182.6655460269797 1182.66391490379 39.971 3 -1.3032813045406244 0.38058396288289165 1.0 ['ENSG00000255150|ENST00000527879|EID3'] 15347 7219 EALESGVF True PC9_epitope_Rep4 850.4072485722999 850.40614993586 35.073 2 -1.3034318255589303 0.3805943864848124 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF', 'ENST00000545015.1_1_12:133249164-133249818:-|nuORF'] 33443 8449 GLGKLDADETP True H1975_Epitope_Rep1 1114.5506183307 1114.5495299358602 37.427 2 -1.3034993778461819 0.3805943864848124 1.0 ['ENSG00000168152|ENST00000302236|THAP9'] 11416 15128 DFMHIFRTI True PC9_epitope_Rep1 1178.5906497512199 1178.58901490379 63.01 3 -1.3035215760758927 0.3805943864848124 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1'] 77688 8512 PAAAPLEEL True PC9_epitope_Rep5 909.48074786573 909.47964993586 37.683 2 -1.3035704804331236 0.38061405426413075 1.0 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1'] 26240 20949 FHYFFYHYLLR True H1975_Epitope_Rep3 1604.7928547150798 1604.79174993586 87.497 2 -1.3036039754902389 0.38062157665261903 1.0 ['LTR13A_dup7|chr1:43138776-43139741:+|1.4968869294777094|0.2457820778445239|2.61|497.0|37|1|anti-sense'] 1983 17846 AEKERKFVI True PC9_epitope_Rep3 1118.64479349906 1118.64368993586 73.84 2 -1.303671906948314 0.38064124362399804 1.0 ['ENSG00000178795|ENST00000315938|GDPD4', 'nc|ENSG00000178795|Q6W3E5|GDPD4'] 17858 11599 EIASASDCDHA True PC9_epitope_Rep1 1117.4346026022902 1117.43350993586 49.493 2 -1.303741073360637 0.3806620843756831 1.0 ['FBXO30|p.A482D|1|0.06|ENSG00000118496|chr6:145804961-145804961|G/T|missense_variant'] 62793 20628 LMEGLFPRDVN True NCI_RA007_Epitope_Rep3 1289.64380752289 1289.64217490379 89.857 3 -1.303766631385546 0.3806620843756831 1.0 ['SEPT11-SHROOM3|2|fusion', 'ENSG00000138771|ENST00000296043|SHROOM3'] 113534 17048 TQTRQERL True NCI_RA007_Epitope_Rep3 1030.5519557433797 1030.55084993586 74.921 2 -1.303791804590523 0.3806620843756831 1.0 ['ENST00000322177.5_1_15:75249143-75249248:-|nuORF'] 129799 14006 VTLALAPI True NCI_RA007_Epitope_Rep1 796.50584041476 796.50474993586 58.507 2 -1.303792690264957 0.3806620843756831 1.0 ['nc|ENSG00000139626|P26010-2|ITGB7', 'ENSG00000139626|ENST00000267082|ITGB7'] 111531 6088 TLLRVLFSQ True NCI_RA007_Epitope_Rep5 1075.6389798426299 1075.6378899358601 30.098 2 -1.3037955705066144 0.3806620843756831 1.0 ['VIP|p.S17R|1|0.24|ENSG00000146469|chr6:152752226-152752226|A/C|missense_variant'] 130833 26770 VVFSILRRFI True PC9_epitope_Rep5 1248.7706627185198 1248.76956993586 109.24 2 -1.3038083030590122 0.3806620843756831 1.0 ['ENST00000366647.8_1_1:231386833-231396301:+|nuORF'] 10556 6822 CQHIPKAERP True H1975_Epitope_Rep1 1177.6026114172498 1177.6015099358601 31.284 2 -1.3038678904979202 0.3806725036126729 1.0 ['ENSG00000160908|ENST00000337673|ZNF394'] 65608 13942 LSGLPDTVFEI True PC9_epitope_Rep1 1189.6230549949698 1189.6219499358601 58.464 2 -1.3039102546751493 0.3806725036126729 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 39919 21515 HQLFTERWP True H1975_Epitope_Rep2 1212.60399131624 1212.60288993586 89.016 2 -1.3039221343750085 0.3806725036126729 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 104912 7169 STFQVFQE True PC9_epitope_Rep1 984.4552613938798 984.45416993586 32.387 2 -1.3039634935122597 0.38068002428658165 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 8543 14368 ATYRFTIV True PC9_epitope_Rep4 969.5283667644899 969.52726993586 63.175 2 -1.3040270326344638 0.38070720808237807 1.0 ['ENST00000529712.5_1_11:47690447-47736202:-|nuORF', 'AGBL2|p.K752Efs*6|1|0.53|ENSG00000165923|chr11:47667658-47667659|-/T|frameshift_variant', 'ENSG00000165923|ENST00000525123|AGBL2'] 61782 2559 LLKKLLII True H1975_Epitope_Rep1 952.7048745744798 952.70376993586 13.192 2 -1.3040310703140634 0.38070720808237807 1.0 ['ENST00000389629.8_1_15:41767943-41768650:+|nuORF'] 89873 10913 RFMLEVTEMF True NCI_RA007_Epitope_Rep4 1301.6148158937297 1301.61316490379 48.838 3 -1.3040860905196365 0.3807205216314339 1.0 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 46340 11084 ITFYEYLKTQK True PC9_epitope_Rep3 1432.7602171741198 1432.75858490379 47.632 3 -1.3041149359690214 0.3807205216314339 1.0 ['ENSG00000188419|ENST00000357749|CHM'] 124936 13934 VLLWKRTWWCH True H1975_Epitope_Rep3 1526.7968945497 1526.79578993586 58.911 2 -1.3041305817422693 0.3807205216314339 1.0 ['ENST00000463441.5_1_7:150020582-150023090:+|nuORF'] 60065 26116 LHSKLISGG True PC9_epitope_Rep5 910.52361573722 910.52250993586 106.12 2 -1.3041425289325403 0.3807205216314339 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 90537 20007 RKFGRFLKMI True NCI_RA007_Epitope_Rep5 1294.7696171726998 1294.76797490379 83.874 3 -1.3041887434953305 0.3807205216314339 1.0 ['ENST00000395603.7_1_X:76907692-76907743:-|nuORF'] 122549 8250 VGTAIGSVK True NCI_RA007_Epitope_Rep2 830.48616759934 830.48561496793 36.727 1 -1.3042712314231781 0.38073556016950183 1.0 ['CDH10|p.N500Mfs*7|1|0.17|ENSG00000040731|chr5:24498414-24498414|T/-|frameshift_variant', 'CDH10|p.D763Ifs*13|1|0.22|ENSG00000040731|chr5:24487743-24487743|C/-|frameshift_variant', 'ENSG00000040731|ENST00000264463|CDH10', 'CDH10|p.P283T|1|0.34|ENSG00000040731|chr5:24511482-24511482|G/T|missense_variant'] 12706 20008 DLFLTNQF True PC9_epitope_Rep5 996.4916469025999 996.49054993586 82.015 2 -1.3042952477153271 0.38073556016950183 1.0 ['nc|ENSG00000085831|Q5SRH9-3|TTC39A', 'ENSG00000085831|ENST00000680483|TTC39A', 'nc|ENSG00000085831|Q5SRH9-6|TTC39A', 'nc|ENSG00000085831|Q5SRH9-4|TTC39A', 'nc|ENSG00000085831|Q5SRH9|TTC39A'] 79318 18588 PGKLTGLRRR True NCI_RA007_Epitope_Rep4 1152.7203584811598 1152.7192699358602 80.406 2 -1.304563406719264 0.38082344799116086 1.0 ['ENST00000479212.5_1_3:113627916-113664322:+|nuORF', 'nc|ENSG00000178075|Q8IYS0-2|GRAMD1C', 'ENSG00000178075|ENST00000358160|GRAMD1C', 'ENST00000471031.1_1_3:113653357-113655330:+|nuORF'] 25850 8625 FGGAKVAG True NCI_RA007_Epitope_Rep3 705.3809742548099 705.38042496793 41.003 1 -1.3045975184379737 0.38082344799116086 1.0 ['ENST00000378097.5_1_1:6052749-6100615:+|nuORF'] 133792 22935 WLRHFKLAQ True NCI_RA007_Epitope_Rep5 1197.67709668685 1197.67546490379 95.444 3 -1.30470239616907 0.38084137679839736 1.0 ['JCAD|p.R430W|1|0.28|ENSG00000165757|chr10:30028860-30028860|G/A|missense_variant'] 133913 23741 WNKRKKRQVP True PC9_epitope_Rep2 1338.79967143102 1338.7980149037899 96.791 3 -1.3047329725132697 0.38084137679839736 1.0 ['ENSG00000122188|ENST00000442561|LAX1', 'nc|ENSG00000122188|Q8IWV1-3|LAX1'] 33785 6884 GLSSQHQPVSI True NCI_RA007_Epitope_Rep3 1151.59348620219 1151.5923899358602 34.186 2 -1.3047391849456456 0.38084137679839736 1.0 ['ENST00000586099.1_1_17:33687214-33689981:-|nuORF'] 12111 19807 DIGFGKLET True PC9_epitope_Rep1 978.5022115863 978.50110993586 81.003 2 -1.3048770825939189 0.38084137679839736 1.0 ['ENST00000476153.6_1_1:205492708-205496295:+|nuORF', 'ENST00000505932.5_1_1:205492708-205498898:+|nuORF', 'ENST00000504648.5_1_1:205492597-205500503:+|nuORF', 'ENSG00000117266|ENST00000429964|CDK18', 'nc|ENSG00000117266|Q07002-3|CDK18'] 611 7902 AASKFEVA True PC9_epitope_Rep3 821.4283183700499 821.4272299358599 35.377 2 -1.304927681145708 0.38084889396110044 1.0 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1'] 70169 15370 LYLGPSGPTR True PC9_epitope_Rep3 1059.57129420563 1059.57018993586 64.277 2 -1.305001603591593 0.38085641094127504 1.0 ['ENSG00000189114|ENST00000433642|BLOC1S3'] 11226 17002 DENKKVGLALK True PC9_epitope_Rep1 1213.7030366511697 1213.70192993586 70.221 2 -1.3050161104444866 0.38086392773892774 1.0 ['NUB1-ABCB8|1|fusion', 'ENSG00000013374|ENST00000568733|NUB1', 'nc|ENSG00000013374|Q9Y5A7-2|NUB1'] 80289 13507 PLEGRRYHIYE True PC9_epitope_Rep3 1431.72589735407 1431.72480993586 57.005 2 -1.3050726690223486 0.3808668204443365 1.0 ['ENSG00000134121|ENST00000256509|CHL1', 'nc|ENSG00000134121|O00533|CHL1', 'ENST00000471332.1_1_3:403392-405149:+|nuORF'] 35096 3615 GRQKRRRFVW True NCI_RA007_Epitope_Rep1 1387.80615379379 1387.80451490379 18.005 3 -1.3051061444566976 0.3808668204443365 1.0 ['ENST00000479578.5_1_1:110198981-110200495:+|nuORF'] 113468 8257 TQRGRHQDWR True NCI_RA007_Epitope_Rep2 1338.66536278618 1338.6642699358601 36.756 2 -1.305145597208867 0.380869713009275 1.0 ['ENSG00000189186|ENST00000451261|DCAF8L2'] 57582 5570 LELFYVKYRNL True PC9_epitope_Rep5 1456.8078360728798 1456.8061949037901 26.428 3 -1.3051930073194025 0.380869713009275 1.0 ['nc|ENSG00000124177|Q8TD26-2|CHD6'] 83869 17367 QEIAEKNMEK True NCI_RA007_Epitope_Rep5 1218.5914375968598 1218.5897849037901 73.583 3 -1.3052538471043518 0.38087260543375334 1.0 ['nc|ENSG00000164989|Q6TFL3-3|CCDC171', 'ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171'] 66684 7498 LSTAGPIPRTS True H1975_Epitope_Rep3 1098.6033226099 1098.6022299358601 33.822 2 -1.3052612296494062 0.38087260543375334 1.0 ['DBF4B|p.R381Sfs*109|1|0.3|ENSG00000161692|chr17:44748416-44748421|CAGGGC/A|frameshift_variant', 'ENSG00000161692|ENST00000315005|DBF4B'] 49158 21234 KGNVVLKGEL True PC9_epitope_Rep3 1055.6338944621898 1055.63278993586 86.968 2 -1.3053074945397949 0.3809044006069803 1.0 ['nc|ENSG00000115839|Q15042-4|RAB3GAP1', 'ENSG00000115839|ENST00000264158|RAB3GAP1', 'nc|ENSG00000115839|Q15042-3|RAB3GAP1'] 26960 21860 FLIVFRVLC True PC9_epitope_Rep1 1108.64670807536 1108.6456099358602 88.896 2 -1.3053948168471332 0.38091191609206565 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000196876|Q9UQD0-4|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'SCN9A|p.L1226Rfs*18|1|0.19|ENSG00000169432|chr2:166238218-166238218|A/-|frameshift_variant'] 2835 11763 AEVPALQLL True NCI_RA007_Epitope_Rep2 952.5593325395998 952.55822993586 50.354 2 -1.3054528745921883 0.3809194313946854 1.0 ['ENST00000496575.1_1_22:31289665-31289989:+|nuORF'] 140016 13129 YVLILKTILS True NCI_RA007_Epitope_Rep4 1161.73729690157 1161.73564490379 57.599 3 -1.3054739467919163 0.3809269465148462 1.0 ['OR51A7|p.I254Sfs*19|1|0.11|ENSG00000176895|chr11:4908126-4908126|C/-|frameshift_variant', 'ENSG00000176895|ENST00000641490|OR51A7'] 80956 10641 PNEADAAQGY True H1975_Epitope_Rep2 1034.43050319802 1034.4294099358601 45.954 2 -1.3055931625200752 0.3809304188462612 1.0 ['nc|ENSG00000104812|P13807-2|GYS1', 'ENSG00000104812|ENST00000323798|GYS1'] 63482 6976 LPHKELRFIIY True NCI_RA007_Epitope_Rep2 1427.82890587063 1427.82727490379 31.758 3 -1.3056173401175701 0.3809304188462612 1.0 ['ALG12|p.T457Pfs*4|1|0.16|ENSG00000182858|chr22:49903937-49903937|C/-|frameshift_variant', 'ENSG00000182858|ENST00000330817|ALG12'] 105227 6268 STRARRLQPR True NCI_RA007_Epitope_Rep4 1239.72723476675 1239.72559490379 30.714 3 -1.3056657743218074 0.3809304188462612 1.0 ['ENST00000302904.8_1_17:42294008-42298982:-|nuORF'] 140027 13829 YVLLASEQL True PC9_epitope_Rep3 1034.5648118428599 1034.56370993586 58.274 2 -1.3057001839506495 0.3809304188462612 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 63736 17986 LPRKPHRQ True NCI_RA007_Epitope_Rep3 1030.6148307834599 1030.6137299358602 78.816 2 -1.3057243532087548 0.3809304188462612 1.0 ['ENSG00000173988|ENST00000595396|LRRC63'] 117404 7268 VADILAIR True NCI_RA007_Epitope_Rep5 869.5334521449299 869.53234993586 34.632 2 -1.3057844575279824 0.3809304188462612 1.0 ['ENSG00000155189|ENST00000285518|AGPAT5', 'AGPAT5|p.T229Rfs*19|1|0.39|ENSG00000155189|chr8:6747769-6747769|C/-|frameshift_variant'] 74785 7501 NLNIRSESDA True H1975_Epitope_Rep3 1117.5363652488902 1117.53526993586 33.834 2 -1.3058448014224349 0.3809304188462612 1.0 ['ENSG00000101966|ENST00000371199|XIAP'] 31408 3632 GEDEYEKA True PC9_epitope_Rep1 939.3821560232699 939.38104993586 18.891 2 -1.3058838397581198 0.3809304188462612 1.0 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 34155 7172 GPEPLSHFE True PC9_epitope_Rep3 1011.46616043075 1011.46506993586 32.599 2 -1.3058902145712081 0.3809304188462612 1.0 ['ENSG00000007047|ENST00000262891|MARK4'] 114730 18343 TSVDDFLSV True PC9_epitope_Rep5 981.46549172441 981.46438993586 75.571 2 -1.3059179862460841 0.3809304188462612 1.0 ['nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 114990 19506 TTKNQKGRKV True NCI_RA007_Epitope_Rep5 1158.6833042660999 1158.6816449037901 81.916 3 -1.305920545299986 0.3809304188462612 1.0 ['nc|ENSG00000128513|Q9NUX5-2|POT1', 'ENSG00000128513|ENST00000357628|POT1'] 60938 24182 LKYLNKIKPP True NCI_RA007_Epitope_Rep4 1212.7594293284799 1212.75778490379 104.85 3 -1.3059536221520203 0.3809304188462612 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 82742 17507 PVQCVPYLI True NCI_RA007_Epitope_Rep4 1030.55213898418 1030.5510499358602 75.789 2 -1.3059666899276814 0.3809304188462612 1.0 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 29195 9509 FVASHGQYLR True NCI_RA007_Epitope_Rep3 1176.60399131624 1176.60235490379 44.497 3 -1.3059681306962336 0.3809304188462612 1.0 ['DMXL1|p.D766H|1|0.55|ENSG00000172869|chr5:119134309-119134309|G/C|missense_variant'] 5338 10732 ALSRSALLPP True H1975_Epitope_Rep1 1023.6076797143498 1023.6065899358599 46.243 2 -1.3059771442340107 0.3809304188462612 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4', 'nc|ENSG00000130529|Q8TD43-3|TRPM4'] 100611 17349 SLQLLGFFK True H1975_Epitope_Rep3 1051.6066170851898 1051.60607496793 72.386 1 -1.3060331528036344 0.38094544571879363 1.0 ['ENST00000531791.1_1_11:65146834-65147158:-|nuORF'] 19660 17210 ELRVFHIHNES True NCI_RA007_Epitope_Rep1 1379.6945972257897 1379.6935099358602 71.075 2 -1.3060526533821526 0.38094544571879363 1.0 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 124948 19367 VLMAQKEGKR True PC9_epitope_Rep3 1158.65431263694 1158.65320993586 79.719 2 -1.3061827299692257 0.3809627822879124 1.0 ['ZNF160|p.V321Sfs*36|1|0.4|ENSG00000170949|chr19:53069573-53069573|C/-|frameshift_variant', 'ZNF160|p.A769Pfs*4|1|0.29|ENSG00000170949|chr19:53068233-53068233|C/-|frameshift_variant', 'ENSG00000170949|ENST00000683776|ZNF160'] 121763 22748 VGLYRVKAIY True PC9_epitope_Rep5 1180.6968290719199 1180.69572993586 92.506 2 -1.3062554891281237 0.3809627822879124 1.0 ['ENST00000320201.8_1_12:123469038-123469122:-|nuORF'] 48086 25740 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 106.75 3 -1.3062673877235875 0.3809627822879124 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 49551 9966 KKHQARELD True PC9_epitope_Rep3 1123.6098049726697 1123.60816490379 43.292 3 -1.306378496811081 0.3809627822879124 1.0 ['ENSG00000094880|ENST00000394886|CDC23', 'nc|ENSG00000094880|Q9UJX2-3|CDC23', 'ENST00000482948.5_1_5:137536747-137548896:-|nuORF'] 55167 19908 LAPAEVVVA True PC9_epitope_Rep4 867.5065686907499 867.50546993586 84.711 2 -1.30640226009751 0.3809627822879124 1.0 ['nc|ENSG00000196588|Q969V6|MRTFA', 'ENSG00000196588|ENST00000355630|MRTFA'] 44992 23870 IQKFLKNAGQS True H1975_Epitope_Rep1 1232.6877209401998 1232.68662993586 99.077 2 -1.3064199920632336 0.3809627822879124 1.0 ['ENST00000450482.5_1_20:60718876-60729459:+|nuORF'] 60066 26503 LHSKLISGG True PC9_epitope_Rep5 910.52361573722 910.52250993586 107.92 2 -1.3064375308719285 0.3809627822879124 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 61988 17422 LLLPSCPEP True H1975_Epitope_Rep2 967.50485443859 967.50374993586 72.306 2 -1.3064596056326954 0.3809627822879124 1.0 ['nc|ENSG00000160961|Q96JL9-2|ZNF333', 'ENST00000392987.7_1_19:14804303-14817025:+|nuORF'] 116135 9449 TVSVQPLN True PC9_epitope_Rep2 856.4654321547599 856.46432993586 41.684 2 -1.3064623855925164 0.3809627822879124 1.0 ['ENSG00000187017|ENST00000645284|ESPN'] 59645 13475 LGSNNLTKVP True PC9_epitope_Rep5 1041.58185888933 1041.5807699358602 56.849 2 -1.3064956024232808 0.3809627822879124 1.0 ['ENSG00000186105|ENST00000334994|LRRC70'] 130386 25328 VTVLLALKL True H1975_Epitope_Rep3 968.66340368532 968.66285496793 105.36 1 -1.3065397312847657 0.3809627822879124 1.0 ['ENSG00000262576|ENST00000571252|PCDHGA4', 'nc|ENSG00000262576|Q9Y5G9-2|PCDHGA4'] 136926 23291 YKEILYLIHV True PC9_epitope_Rep4 1289.73835953073 1289.73726993586 97.843 2 -1.3065418986063517 0.3809627822879124 1.0 ['ENSG00000165164|ENST00000378653|CFAP47'] 82715 14771 PVPQLQPEIL True PC9_epitope_Rep6 1132.6492101731599 1132.64755490379 68.773 3 -1.3066454746555924 0.3809945636345986 1.0 ['ENSG00000143382|ENST00000271643|ADAMTSL4', 'nc|ENSG00000143382|Q6UY14-3|ADAMTSL4', 'nc|ENSG00000143382|Q6UY14-2|ADAMTSL4'] 30900 25129 GARTPKCI True PC9_epitope_Rep2 844.45890730568 844.45780993586 102.33 2 -1.3066865072898286 0.38100958621526515 1.0 ['ENSG00000138646|ENST00000264350|HERC5'] 93310 7027 RRRYRRWRMGC True NCI_RA007_Epitope_Rep2 1594.8310057259796 1594.82990993586 31.956 2 -1.3067428459097756 0.38100958621526515 1.0 ['ENST00000488071.1_1_11:64494766-64496427:-|nuORF', 'ENST00000421556.5_1_11:64494482-64496427:-|nuORF', 'ENST00000464324.5_1_11:64494482-64496427:-|nuORF'] 35247 14361 GSKHGRKA True NCI_RA007_Epitope_Rep5 839.47258322387 839.47148993586 61.924 2 -1.3067936017965962 0.3810124739115663 1.0 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF'] 39631 9734 HPPPLAFL True H1975_Epitope_Rep2 890.50142374066 890.50032993586 42.428 2 -1.3068022287716416 0.3810124739115663 1.0 ['ENST00000585091.1_1_17:79977083-79977522:-|nuORF'] 95733 26139 SCCCTHCC True H1975_Epitope_Rep2 858.19510733838 858.19455496793 107.42 1 -1.3068953471485338 0.3810136258296225 1.0 ['ENSG00000204323|ENST00000375215|SMIM5'] 41455 19735 IAWCWGCV True NCI_RA007_Epitope_Rep5 936.3986155482398 936.39750993586 82.823 2 -1.3069352958736458 0.3810136258296225 1.0 ['ENST00000268261.8_1_16:8942748-8942910:+|nuORF'] 60060 23782 LHSKLISGG True NCI_RA007_Epitope_Rep4 910.52361573722 910.52250993586 103.1 2 -1.3069417721749326 0.3810136258296225 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 15550 18856 EASLRFEHRDL True PC9_epitope_Rep6 1371.68951184535 1371.6884099358601 85.177 2 -1.3069672632457723 0.3810136258296225 1.0 ['ENSG00000177602|ENST00000325418|HASPIN'] 139496 7068 YTHVNEVWP True NCI_RA007_Epitope_Rep4 1143.53490869691 1143.53326490379 33.812 3 -1.3069675961636544 0.3810136258296225 1.0 ['ENSG00000188716|ENST00000338487|DUSP29'] 25455 5747 FEMESEKN True NCI_RA007_Epitope_Rep3 1012.4171616329999 1012.41606993586 29.584 2 -1.307063837590893 0.38103268386188827 1.0 ['ENSG00000170231|ENST00000402432|FABP6', 'nc|ENSG00000170231|P51161-2|FABP6'] 112096 12569 TLTQHLRTHRR True NCI_RA007_Epitope_Rep1 1417.8014623361698 1417.80036993586 52.87 2 -1.3071305587245274 0.38103268386188827 1.0 ['ENSG00000099326|ENST00000215057|MZF1', 'nc|ENSG00000099326|P28698-2|MZF1', 'ENST00000600004.1_1_19:59073441-59074896:-|nuORF'] 79990 11215 PKALPAIN True NCI_RA007_Epitope_Rep2 822.4963383602201 822.49524993586 48.209 2 -1.3071350925164615 0.38103268386188827 1.0 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-2|SLC39A8'] 140402 9745 YYFCRWYRNRK True H1975_Epitope_Rep1 1653.7986854548496 1653.79758993586 42.414 2 -1.3071375286609916 0.38103268386188827 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 66683 14486 LSSYSHRAQKF True NCI_RA007_Epitope_Rep4 1322.6731335052198 1322.67202993586 63.073 2 -1.3071487423737294 0.38103268386188827 1.0 ['RPRD2|p.E882K|1|0.24|ENSG00000163125|chr1:150471592-150471592|G/A|missense_variant'] 92694 14797 RRHKKIHAV True PC9_epitope_Rep5 1143.71012815063 1143.70849490379 61.917 3 -1.3071505760855586 0.38103268386188827 1.0 ['ENSG00000142409|ENST00000610935|ZNF787'] 60025 14016 LHRLLLLFLV True PC9_epitope_Rep3 1235.81179925451 1235.8101449037902 58.994 3 -1.3071930622662773 0.38103268386188827 1.0 ['nc|ENSG00000143552|Q5VU65-2|NUP210L', 'ENSG00000143552|ENST00000368559|NUP210L'] 16798 15964 EFKKHYGYSLY True NCI_RA007_Epitope_Rep4 1433.69795127073 1433.6968499358602 69.277 2 -1.3072402249151809 0.38103268386188827 1.0 ['ENST00000505805.1_1_4:79518453-79531266:+|nuORF', 'ENSG00000138772|ENST00000264908|ANXA3'] 94194 7757 RWLWWQPWWWK True NCI_RA007_Epitope_Rep2 1756.8779217517197 1756.87627490379 34.801 3 -1.3072560398109478 0.38103268386188827 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1'] 131629 10509 VWDMPEHMDY True H1975_Epitope_Rep2 1321.51074474801 1321.5096499358601 45.442 2 -1.3074982511694648 0.38115977192769623 1.0 ['ENSG00000170734|ENST00000372236|POLH'] 31745 6824 GELAYALSN True H1975_Epitope_Rep2 936.4552613938799 936.45416993586 31.167 2 -1.3075485903098947 0.38115977192769623 1.0 ['CTNNA1|p.N283S|1|0.12|ENSG00000044115|chr5:138824789-138824789|A/G|missense_variant'] 20238 5239 ENVQVRDAGL True H1975_Epitope_Rep2 1099.56218607391 1099.56108993586 25.22 2 -1.3075695552378435 0.38115977192769623 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 55276 24170 LAQTPLVKCKF True NCI_RA007_Epitope_Rep2 1246.7107648838999 1246.7096699358601 101.52 2 -1.3075753803195547 0.38115977192769623 1.0 ['ENST00000373358.7_2_X:75397480-75397852:+|nuORF'] 112629 12730 TPEEWDLIH True PC9_epitope_Rep4 1138.5294889632999 1138.52838993586 56.82 2 -1.3076095356847388 0.3811747864906832 1.0 ['THRA-PSMD3|1|fusion', 'ENSG00000126351|ENST00000450525|THRA', 'nc|ENSG00000126351|P10827-4|THRA', 'nc|ENSG00000126351|P10827-3|THRA', 'nc|ENSG00000126351|P10827|THRA'] 133668 21844 WKTLKMLNFRL True PC9_epitope_Rep6 1448.8326113520798 1448.8315099358601 96.925 2 -1.3076244340386882 0.3811747864906832 1.0 ['ENST00000394961.6_1_4:95155160-95155232:+|nuORF'] 17665 10868 EHSEMKSDEG True H1975_Epitope_Rep2 1147.4451672859898 1147.4440699358602 46.833 2 -1.3078370368992371 0.38119268280848173 1.0 ['ENST00000609796.1_1_20:1460117-1472086:-|nuORF', 'ENSG00000196209|ENST00000359801|SIRPB2'] 17874 6996 EIDALLKEDDP True H1975_Epitope_Rep3 1256.61361251008 1256.61250993586 31.872 2 -1.3078730179467772 0.38119268280848173 1.0 ['ENSG00000116497|ENST00000373475|S100PBP', 'nc|ENSG00000116497|Q96BU1-2|S100PBP', 'ENST00000531123.5_1_1:33290993-33299636:+|nuORF', 'ENST00000356689.7_1_1:33290993-33299636:+|nuORF'] 25367 6121 FEHRVNVCE True PC9_epitope_Rep2 1131.51312770651 1131.51202993586 28.939 2 -1.3078959897071656 0.38119268280848173 1.0 ['ENSG00000162300|ENST00000294258|ZFPL1'] 91034 22803 RLKTAAAAAA True PC9_epitope_Rep4 942.5610638750998 942.55996993586 95.933 2 -1.3079803827142102 0.38119268280848173 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 36628 17015 GVLLVMLIF True H1975_Epitope_Rep3 1003.6140109647499 1003.6134749679301 71.043 1 -1.3080382137454705 0.3812123197108095 1.0 ['MS4A7|p.V186L|1|0.21|ENSG00000166927|chr11:60392694-60392694|G/T|missense_variant'] 56109 7424 LDLQNLRFDP True H1975_Epitope_Rep1 1229.6404363946099 1229.6393299358601 33.56 2 -1.3080786046785673 0.38121634078889916 1.0 ['ENSG00000269437|ENST00000602195|NXF2B', 'ENSG00000269405|ENST00000625106|NXF2', 'nc|ENSG00000290798|Q9H1B4-5|NXF5', 'nc|ENSG00000290798|Q9H1B4-4|NXF5', 'nc|ENSG00000290798|Q9H1B4-6|NXF5', 'nc|ENSG00000290798|Q9H1B4-2|NXF5', 'nc|ENSG00000290798|Q9H1B4|NXF5', 'chrX:101841104-101841261|143|13.93|0.85|4.03|-|2|NXF5,NXF5|1', 'nc|ENSG00000290798|Q9H1B4-3|NXF5'] 43717 5487 IIRQELSDSP True NCI_RA007_Epitope_Rep2 1156.6088019131598 1156.6077099358602 25.961 2 -1.3082339014885211 0.38121634078889916 1.0 ['DSG1|p.P203L|1|0.42|ENSG00000134760|chr18:31331791-31331791|C/T|missense_variant'] 111960 11987 TLSEFLGTFI True H1975_Epitope_Rep2 1126.5910265906998 1126.58992993586 51.19 2 -1.3082719548152102 0.38121634078889916 1.0 ['ENSG00000103569|ENST00000219919|AQP9', 'ENST00000559443.1_1_15:58430764-58438974:+|nuORF'] 41261 22677 IAFKKKLY True PC9_epitope_Rep2 1009.6324379102098 1009.63134993586 92.721 2 -1.3083078531466494 0.38121634078889916 1.0 ['ENSG00000240303|ENST00000264990|ACAD11', 'nc|ENSG00000240303|Q709F0-3|ACAD11', 'ENST00000496418.5_1_3:132277817-132297733:-|nuORF'] 114093 24527 TRRLLAHL True NCI_RA007_Epitope_Rep3 978.6086827738598 978.60758993586 106.12 2 -1.3083647561810918 0.38121634078889916 1.0 ['SPATA6|p.R236L|1|0.44|ENSG00000132122|chr1:48399424-48399424|C/A|missense_variant'] 4553 18506 AKVIRSLHGR True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 78.011 2 -1.3083777617269143 0.38121634078889916 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 69788 22182 LWRLPEKV True PC9_epitope_Rep4 1039.6178504752297 1039.61674993586 93.566 2 -1.3083829247671088 0.38121634078889916 1.0 ['HTR3A|p.V448Cfs*12|1|0.42|ENSG00000166736|chr11:113989666-113989666|C/-|frameshift_variant', 'nc|ENSG00000166736|P46098-3|HTR3A', 'ENSG00000166736|ENST00000504030|HTR3A', 'nc|ENSG00000166736|P46098-4|HTR3A', 'nc|ENSG00000166736|P46098-2|HTR3A', 'nc|ENSG00000166736|P46098-5|HTR3A', 'HTR3A|p.L316Wfs*2|1|0.25|ENSG00000166736|chr11:113986853-113986853|G/-|frameshift_variant'] 22537 9439 ETLKMKLHCRT True NCI_RA007_Epitope_Rep2 1358.7162612704997 1358.71462490379 41.327 3 -1.3085912359703529 0.3812723633937777 1.0 ['ENST00000369171.3_1_1:197716442-197716544:-|nuORF'] 15643 6563 EAYASDRHR True NCI_RA007_Epitope_Rep2 1103.5108192073899 1103.5097299358602 30.141 2 -1.3086626811361624 0.3813116305020195 1.0 ['ENST00000330736.9_1_16:89334888-89371640:-|nuORF', 'ENSG00000167522|ENST00000301030|ANKRD11'] 73436 8384 NESNRPDLL True PC9_epitope_Rep3 1056.5199869087598 1056.5188899358602 37.216 2 -1.3086878634558112 0.3813116305020195 1.0 ['ENSG00000162753|ENST00000367714|SLC9C2'] 121542 2654 VGKPDPAAP True PC9_epitope_Rep2 850.4548674710599 850.45376993586 14.862 2 -1.3087810566378442 0.38133126334174267 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2', 'nc|ENSG00000169398|Q05397-2|PTK2'] 58497 19826 LEYSGRQKI True PC9_epitope_Rep4 1092.5927579262 1092.5916699358602 84.389 2 -1.308879813984058 0.38134914859554647 1.0 ['ENST00000430060.1_1_21:23157296-23158685:+|nuORF'] 95357 17398 SAHFYAIVLR True PC9_epitope_Rep5 1175.6451278522297 1175.64402993586 71.922 2 -1.3089356427998478 0.38134914859554647 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF'] 109162 25694 TFPVKGLK True PC9_epitope_Rep5 888.5432885526399 888.54218993586 104.19 2 -1.3089525673229034 0.38134914859554647 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000608689.5_2_20:39801092-39811607:+|nuORF'] 122373 3339 VGSEQEEY True PC9_epitope_Rep2 939.3821560232698 939.38104993586 18.107 2 -1.308992932017519 0.38134914859554647 1.0 ['nc|ENSG00000143374|Q9BW92-2|TARS2', 'ENSG00000143374|ENST00000369064|TARS2'] 101975 15187 SPMYFFLRNLY True PC9_epitope_Rep1 1449.7114931598899 1449.7103899358601 63.238 2 -1.3091116589114784 0.38135202658451983 1.0 ['OR10A2|p.S54Y|1|0.15|ENSG00000170790|chr11:6869915-6869915|C/A|missense_variant'] 92593 21139 RRDVWKSNSH True H1975_Epitope_Rep3 1283.64831573971 1283.64667490379 88.29 3 -1.3091191831665516 0.38135202658451983 1.0 ['ENST00000347667.5_1_21:42649366-42649483:+|nuORF'] 116086 4959 TVSFQGER True NCI_RA007_Epitope_Rep3 922.4508447197799 922.44974993586 26.502 2 -1.3092413285974176 0.38136990952969996 1.0 ['ENST00000374512.7_2_6:33381598-33383628:+|nuORF'] 82641 23100 PVLLLLLFRLA True PC9_epitope_Rep6 1266.84276502962 1266.8411249037902 101.95 3 -1.3092633256091182 0.38136990952969996 1.0 ['ENST00000474436.1_1_9:35090976-35092764:-|nuORF', 'ENST00000465745.6_1_9:35090240-35092764:-|nuORF', 'ENSG00000165282|ENST00000378617|PIGO'] 27152 14927 FLRSLTSPIP True PC9_epitope_Rep4 1129.64954452633 1129.64788490379 65.357 3 -1.309274256676154 0.38136990952969996 1.0 ['ENST00000586888.1_1_19:30157871-30158024:+|nuORF'] 27502 18427 FPENWKEHI True PC9_epitope_Rep6 1198.5771078620598 1198.5760099358602 83.524 2 -1.3093050080508468 0.38136990952969996 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1'] 83580 9333 QDSQERLQNE True H1975_Epitope_Rep2 1245.55855724545 1245.5574699358601 40.86 2 -1.309329223023976 0.3813895390436459 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 126809 10019 VPSSKEELDKE True H1975_Epitope_Rep3 1259.6245115469499 1259.62340993586 43.576 2 -1.3093834231119108 0.38140916808149405 1.0 ['ENSG00000161048|ENST00000465647|NAPEPLD'] 60430 9383 LIKSAYEEQRI True H1975_Epitope_Rep1 1348.73506505544 1348.7339699358602 41.002 2 -1.3093908538599095 0.3814166696984029 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 89961 703 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 3.7342 3 -1.3095383930269056 0.3814362979311683 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 3543 6245 AGMGPPSP True H1975_Epitope_Rep1 712.32141077336 712.3208649679301 29.089 1 -1.3096474162691951 0.3814709270599648 1.0 ['ENST00000469423.1_1_19:12757375-12758379:-|nuORF'] 80027 19367 PKGKAPLRARS True H1975_Epitope_Rep1 1179.72002412799 1179.7189299358602 80.678 2 -1.3096538403779612 0.3814709270599648 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 126144 8548 VPFADFSHL True PC9_epitope_Rep2 1031.50763131991 1031.50652993586 38.241 2 -1.309663360380888 0.3814709270599648 1.0 ['ENST00000253413.9_1_22:18111444-18111552:-|nuORF'] 42183 7281 IEGAEAALHQK True H1975_Epitope_Rep3 1165.6091362663299 1165.60802993586 32.981 2 -1.3097630655115005 0.3814991754777379 1.0 ['nc|ENSG00000176049|Q96AA8-2|JAKMIP2', 'nc|ENSG00000176049|Q96AA8|JAKMIP2', 'ENSG00000176049|ENST00000616793|JAKMIP2', 'nc|ENSG00000176049|Q96AA8-4|JAKMIP2'] 97901 4621 SHMAKDIPFK True H1975_Epitope_Rep3 1172.60121443492 1172.59957490379 22.897 3 -1.3097840404228083 0.3814991754777379 1.0 ['ENSG00000179270|ENST00000331664|PCARE', 'PCARE|p.R571Gfs*11|1|0.15|ENSG00000179270|chr2:29072552-29072552|C/-|frameshift_variant'] 131576 10894 VVVTGHVL True PC9_epitope_Rep6 822.49633836022 822.49524993586 52.766 2 -1.3097893962133758 0.3814991754777379 1.0 ['nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851|MICAL2'] 21676 9030 ERVPKIAP True NCI_RA007_Epitope_Rep3 908.5443511817999 908.54324993586 42.615 2 -1.309824118143332 0.3814991754777379 1.0 ['nc|ENSG00000132842|O00203-3|AP3B1', 'ENSG00000132842|ENST00000255194|AP3B1'] 108108 6772 TDLRFHSAA True PC9_epitope_Rep1 1016.5039429218 1016.50284993586 30.854 2 -1.3098331261245981 0.3814991754777379 1.0 ['H3-3B|p.Q86H|1|0.32|ENSG00000132475|chr17:75778834-75778834|C/A|missense_variant'] 109029 3706 TEWRVNIDTVM True NCI_RA007_Epitope_Rep2 1362.66018586302 1362.65908993586 19.061 2 -1.3098604439776504 0.3814991754777379 1.0 ['ENPP7|p.A174V|1|0.22|ENSG00000182156|chr17:79735164-79735164|C/T|missense_variant'] 2616 19053 AESLVHVHFKE True H1975_Epitope_Rep2 1294.66698549562 1294.6658899358602 79.093 2 -1.3098755920030167 0.3814991754777379 1.0 ['nc|ENSG00000114650|Q12770-3|SCAP', 'ENSG00000114650|ENST00000265565|SCAP', 'ENST00000494938.2_1_3:47466973-47468693:-|nuORF'] 5731 22740 APCMVLRLGF True H1975_Epitope_Rep1 1105.57764253937 1105.5765499358602 94.583 2 -1.3098801333613639 0.3815066749117893 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2'] 86985 11948 QRWCSRPRRER True H1975_Epitope_Rep1 1528.79058038264 1528.78948993586 50.962 2 -1.3099078688980195 0.38150954834798423 1.0 ['ENST00000547187.5_2_12:50135837-50138293:+|nuORF'] 99836 11113 SLGYGHTVPL True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 48.071 2 -1.3099662841637416 0.38150954834798423 1.0 ['ENST00000472190.5_1_1:233765551-233807273:+|nuORF'] 78656 14925 PEAARPAIHS True NCI_RA007_Epitope_Rep4 1047.5461420869499 1047.54504993586 64.874 2 -1.3099895674803972 0.3815124216448222 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 80241 14711 PLCNLSDVPP True H1975_Epitope_Rep3 1053.51648175145 1053.5153899358602 61.958 2 -1.3100492445584138 0.3815124216448222 1.0 ['ENST00000560489.2_1_15:49658263-49658881:-|nuORF'] 96099 8634 SEDPPSVFN True H1975_Epitope_Rep3 990.4294405688601 990.42834993586 38.206 2 -1.3100697257717508 0.3815199204636388 1.0 ['nc|ENSG00000188467|Q71RS6-2|SLC24A5', 'ENSG00000188467|ENST00000341459|SLC24A5'] 128681 11581 VSMRRYQKYQ True NCI_RA007_Epitope_Rep2 1357.6924890508099 1357.6913899358601 49.638 2 -1.3101251085934196 0.38156379199553825 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant'] 110171 15094 TIDKVVKI True PC9_epitope_Rep2 914.5800679841799 914.57896993586 63.317 2 -1.3102812431623903 0.38157878784204846 1.0 ['nc|ENSG00000175054|Q13535-2|ATR', 'nc|ENSG00000175054|Q13535-3|ATR', 'ENSG00000175054|ENST00000350721|ATR'] 5240 8247 ALQERCLCLWR True NCI_RA007_Epitope_Rep1 1389.7009455595298 1389.6998499358601 36.078 2 -1.310285337369255 0.38157878784204846 1.0 ['ENST00000539976.1_1_16:89981432-89981549:+|nuORF'] 18307 9116 EITFEALK True NCI_RA007_Epitope_Rep2 949.5120479940099 949.51094993586 40.065 2 -1.3103768503047801 0.3815966539370795 1.0 ['nc|ENSG00000132294|Q14156-3|EFR3A', 'nc|ENSG00000132294|Q14156-2|EFR3A', 'EFR3A|p.L782Wfs*15|1|0.42|ENSG00000132294|chr8:132003268-132003268|A/-|frameshift_variant', 'ENSG00000132294|ENST00000254624|EFR3A'] 18708 8164 ELDFLNEGRN True H1975_Epitope_Rep1 1205.56766537717 1205.5665699358601 36.344 2 -1.3104234558156778 0.3815966539370795 1.0 ['nc|ENSG00000063761|Q86TW2-3|ADCK1', 'ADCK1|p.N489Gfs*12|1|0.28|ENSG00000063761|chr14:77933283-77933289|CAACTTA/-|frameshift_variant', 'ENSG00000063761|ENST00000238561|ADCK1', 'nc|ENSG00000063761|Q86TW2|ADCK1'] 4092 22905 AHSPCYGRLEV True NCI_RA007_Epitope_Rep5 1230.5815416195 1230.5798849037901 95.326 3 -1.3104590447507265 0.3815966539370795 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1'] 37106 6041 GVSRNEDL True PC9_epitope_Rep2 888.4301092751999 888.42900993586 28.629 2 -1.3104606092812985 0.3815966539370795 1.0 ['nc|ENSG00000130305|Q96P11-5|NSUN5', 'nc|ENSG00000130305|Q96P11|NSUN5', 'ENSG00000130305|ENST00000438747|NSUN5', 'nc|ENSG00000130305|Q96P11-4|NSUN5', 'nc|ENSG00000130305|Q96P11-3|NSUN5', 'ENST00000471461.5_1_7:72717735-72721871:-|nuORF'] 66955 9928 LSYRQTSL True PC9_epitope_Rep5 966.5134449763399 966.51234993586 43.16 2 -1.3106517591376237 0.381665878701919 1.0 ['ENST00000495864.5_1_3:45877070-45877133:-|nuORF'] 71765 9341 MNEYNYLK True PC9_epitope_Rep3 1073.48518162317 1073.48408993586 40.87 2 -1.3106534514701214 0.381665878701919 1.0 ['ENSG00000230453|ENST00000684830|ANKRD18B', 'nc|ENSG00000230453|A2A2Z9|ANKRD18B'] 130871 9676 VVGRLILG True NCI_RA007_Epitope_Rep2 825.5436229058099 825.54252993586 42.257 2 -1.3107003419168288 0.381665878701919 1.0 ['ENSG00000132718|ENST00000368324|SYT11'] 65309 11505 LSEKQVSQLPV True NCI_RA007_Epitope_Rep2 1226.68705223386 1226.6859499358602 49.345 2 -1.3107055390375948 0.381665878701919 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'PLXNA3|p.L1330Cfs*99|1|0.11|ENSG00000130827|chrX:154468325-154468325|C/-|frameshift_variant', 'PLXNA3|p.S956Lfs*51|1|0.53|ENSG00000130827|chrX:154466439-154466440|-/T|frameshift_variant'] 95849 17991 SDLFLGGV True PC9_epitope_Rep4 806.4174193331799 806.41632993586 77.258 2 -1.3107806873535799 0.381665878701919 1.0 ['NRXN3|p.K744Sfs*6|1|0.41|ENSG00000021645|chr14:78803804-78803804|C/-|frameshift_variant', 'nc|ENSG00000021645|Q9Y4C0-4|NRXN3', 'ENSG00000021645|ENST00000335750|NRXN3', 'nc|ENSG00000021645|Q9Y4C0|NRXN3'] 92869 24633 RRLSPRATF True PC9_epitope_Rep2 1102.63596015086 1102.63486993586 100.4 2 -1.3107845952066393 0.381665878701919 1.0 ['ITGAX|p.G684R|1|0.2|ENSG00000140678|chr16:31371674-31371674|G/C|missense_variant'] 110364 13820 TILNRKFKKE True H1975_Epitope_Rep3 1275.7663056140698 1275.7652099358602 58.464 2 -1.3108839386121316 0.3816762431207118 1.0 ['ESF1|p.M521I|1|0.18|ENSG00000089048|chr20:13766880-13766880|C/T|missense_variant'] 36717 11792 GVNFAIAK True PC9_epitope_Rep5 818.46503823194 818.46394993586 50.355 2 -1.310927545684243 0.3816762431207118 1.0 ['ENSG00000138375|ENST00000357276|SMARCAL1'] 97765 20021 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 83.929 2 -1.3109442337239634 0.3816762431207118 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 128292 14156 VSASEAEERP True PC9_epitope_Rep6 1073.4989171110099 1073.4978299358602 66.32 2 -1.3109788266014049 0.38169586035517306 1.0 ['ENSG00000253797|ENST00000521776|UTP14C'] 93586 19322 RSTNIKKA True NCI_RA007_Epitope_Rep5 916.5454138109599 916.54430993586 81.198 2 -1.3110144992410186 0.3817518425135764 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 81718 8265 PSAEVTGLP True PC9_epitope_Rep5 869.4494477374499 869.44834993586 36.732 2 -1.3110534874791604 0.38175470920507165 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 30396 19210 GAFDHLPQL True PC9_epitope_Rep5 996.5028802926399 996.50178993586 78.931 2 -1.311057138960396 0.38175470920507165 1.0 ['ENSG00000169704|ENST00000307395|GP9'] 2988 10374 AFLWFSWF True PC9_epitope_Rep5 1102.5276384884999 1102.5265499358602 44.888 2 -1.3111045365874765 0.3817743245372671 1.0 ['ENST00000581677.1_1_18:268240-268348:+|nuORF'] 73195 7673 NEERQDTDMQ True H1975_Epitope_Rep3 1264.498993764 1264.49788993586 34.498 2 -1.3111790178622142 0.38178181818181817 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3', 'ENST00000492674.1_1_7:99809286-99811635:+|nuORF'] 112775 19947 TPLELKLKH True PC9_epitope_Rep3 1077.65462990677 1077.6535299358602 81.969 2 -1.3112390453618585 0.38182567484030494 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98'] 19184 17962 ELKKEEFR True PC9_epitope_Rep2 1077.5818588893299 1077.5807699358602 74.395 2 -1.3112914207269442 0.3818331676807835 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'NLRP4|p.L121Yfs*31|1|0.29|ENSG00000160505|chr19:55857753-55857753|C/-|frameshift_variant'] 139709 16862 YTVHHIVWN True PC9_epitope_Rep6 1167.5825275956697 1167.5814299358601 77.378 2 -1.3113213085357358 0.3818388965650983 1.0 ['nc|ENSG00000069020|O15021-2|MAST4', 'nc|ENSG00000069020|O15021-3|MAST4', 'nc|ENSG00000069020|O15021-6|MAST4', 'ENSG00000069020|ENST00000403625|MAST4'] 110348 6082 TILATTAA True PC9_epitope_Rep2 760.43306939732 760.43196993586 28.787 2 -1.3113311575976172 0.3818388965650983 1.0 ['ENSG00000181291|ENST00000631683|TMEM132E'] 81518 4909 PQSWSSLWKHD True PC9_epitope_Rep5 1369.64149902377 1369.6398449037902 23.924 3 -1.3113571937748678 0.3818388965650983 1.0 ['ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2'] 82204 5689 PTGHNMKI True PC9_epitope_Rep6 896.45382192524 896.45272993586 30.004 2 -1.3113747108149099 0.3818388965650983 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 114318 12089 TSAYQEHE True H1975_Epitope_Rep2 963.3933894133098 963.39228993586 51.583 2 -1.3114362542876732 0.3818417607989528 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000490135.6_1_6:152637953-152655276:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 72552 5857 MVHPDNCPEEL True NCI_RA007_Epitope_Rep4 1282.53220846858 1282.53110993586 29.151 2 -1.311456656990353 0.3818417607989528 1.0 ['LCK|p.R461H|1|0.13|ENSG00000182866|chr1:32285568-32285568|G/A|missense_variant'] 92173 8218 RQEYLDQQL True PC9_epitope_Rep1 1191.58840082175 1191.58730993586 36.442 2 -1.3115017344837394 0.38184462489395227 1.0 ['ENSG00000197892|ENST00000524189|KIF13B'] 113600 21687 TRARELNQ True PC9_epitope_Rep4 986.5257409955398 986.52464993586 91.621 2 -1.3115796058560423 0.38184462489395227 1.0 ['ENSG00000132744|ENST00000255082|ACY3'] 93159 20495 RRRRQFTVRLN True H1975_Epitope_Rep2 1500.88619501964 1500.88453490379 84.914 3 -1.3116497628882164 0.38188847547599714 1.0 ['ENSG00000274180|ENST00000611551|NATD1'] 98470 6760 SIKQERISY True NCI_RA007_Epitope_Rep4 1122.6033226099 1122.6022299358601 32.622 2 -1.3116660206751662 0.3819080860965678 1.0 ['ENST00000541426.1_1_12:11803061-11978588:+|nuORF', 'ETV6-LOH12CR1|1|fusion', 'ETV6|p.E361Rfs*10|1|0.26|ENSG00000139083|chr12:11884514-11884514|G/-|frameshift_variant', 'ENSG00000139083|ENST00000396373|ETV6', 'ETV6|p.P19H|1|0.24|ENSG00000139083|chr12:11752472-11752472|C/A|missense_variant'] 97383 24230 SGCGGSAA True H1975_Epitope_Rep1 608.22242500808 608.22187496793 100.5 1 -1.3118152569720807 0.38198652382568227 1.0 ['ENST00000566637.5_1_16:88780822-88781656:+|nuORF'] 65337 7297 LSELPDTGSEH True NCI_RA007_Epitope_Rep2 1183.53569654255 1183.5345899358601 33.004 2 -1.311865359439235 0.38198652382568227 1.0 ['ENST00000281187.9_1_11:134115764-134115887:+|nuORF'] 111370 19390 TLIRHKVF True NCI_RA007_Epitope_Rep4 1012.6181848283999 1012.61708993586 83.852 2 -1.311919668751433 0.38198652382568227 1.0 ['FAM135B|p.N1365K|1|0.3|ENSG00000147724|chr8:138132719-138132719|G/T|missense_variant'] 46810 16041 IVDQRAWNL True PC9_epitope_Rep1 1113.59309227937 1113.59198993586 66.516 2 -1.3119216533188107 0.38198652382568227 1.0 ['nc|ENSG00000133943|Q7Z3D6-5|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6-4|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6-3|DGLUCY', 'nc|ENSG00000133943|Q7Z3D6|DGLUCY', 'ENSG00000133943|ENST00000256324|DGLUCY'] 87282 21379 QSSVVRCRPLT True PC9_epitope_Rep6 1244.6659399497998 1244.66484993586 95.107 2 -1.3119929024690626 0.3820129413760512 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 100773 14850 SLRQQLDEL True PC9_epitope_Rep3 1100.5825871653199 1100.5814899358602 62.257 2 -1.312010662740148 0.3820129413760512 1.0 ['ENSG00000182253|ENST00000336292|SYNM', 'nc|ENSG00000182253|O15061-2|SYNM', 'nc|ENSG00000182253|O15061-3|SYNM'] 16142 4456 EEELIFSNP True NCI_RA007_Epitope_Rep4 1076.50260550912 1076.5015099358602 23.514 2 -1.3120231200753847 0.3820129413760512 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 118948 9933 VEESNEEVCL True H1975_Epitope_Rep1 1149.48596946881 1149.4848699358602 43.143 2 -1.3120250789044428 0.3820129413760512 1.0 ['MYT1L|p.D319N|1|0.29|ENSG00000186487|chr2:1922814-1922814|C/T|missense_variant'] 89059 22356 REEKVKALL True H1975_Epitope_Rep1 1084.6604435631998 1084.65934993586 93.02 2 -1.3120782333379248 0.3820129413760512 1.0 ['nc|ENSG00000007174|Q9NYC9-2|DNAH9', 'ENSG00000007174|ENST00000262442|DNAH9', 'nc|ENSG00000007174|Q9NYC9-3|DNAH9'] 96797 8014 SERSEARRK True H1975_Epitope_Rep3 1117.59521753769 1117.59412993586 35.798 2 -1.3120836319949074 0.3820129413760512 1.0 ['nc|ENSG00000198561|O60716-32|CTNND1', 'nc|ENSG00000198561|O60716-31|CTNND1', 'nc|ENSG00000198561|O60716-2|CTNND1', 'nc|ENSG00000198561|O60716-4|CTNND1', 'nc|ENSG00000198561|O60716-6|CTNND1', 'nc|ENSG00000198561|O60716-3|CTNND1', 'nc|ENSG00000198561|O60716-5|CTNND1', 'nc|ENSG00000198561|O60716-7|CTNND1', 'nc|ENSG00000198561|O60716-9|CTNND1', 'nc|ENSG00000198561|O60716-8|CTNND1', 'nc|ENSG00000198561|O60716-10|CTNND1', 'nc|ENSG00000198561|O60716-12|CTNND1', 'nc|ENSG00000198561|O60716-14|CTNND1', 'nc|ENSG00000198561|O60716-11|CTNND1', 'nc|ENSG00000198561|O60716-13|CTNND1', 'nc|ENSG00000198561|O60716-17|CTNND1', 'nc|ENSG00000198561|O60716-15|CTNND1', 'nc|ENSG00000198561|O60716-18|CTNND1', 'nc|ENSG00000198561|O60716-16|CTNND1', 'nc|ENSG00000198561|O60716-20|CTNND1', 'nc|ENSG00000198561|O60716-22|CTNND1', 'nc|ENSG00000198561|O60716-19|CTNND1', 'nc|ENSG00000198561|O60716-21|CTNND1', 'nc|ENSG00000198561|O60716-23|CTNND1', 'nc|ENSG00000198561|O60716-24|CTNND1', 'nc|ENSG00000198561|O60716-25|CTNND1', 'nc|ENSG00000198561|O60716-26|CTNND1', 'nc|ENSG00000198561|O60716-28|CTNND1', 'nc|ENSG00000198561|O60716-30|CTNND1', 'nc|ENSG00000198561|O60716-27|CTNND1', 'nc|ENSG00000198561|O60716-29|CTNND1', 'ENSG00000198561|ENST00000399050|CTNND1'] 86341 7667 QQKLLDSTK True PC9_epitope_Rep5 1059.59242357303 1059.5913299358601 34.435 2 -1.3120901989091522 0.3820129413760512 1.0 ['nc|ENSG00000186409|Q5VVM6-2|CCDC30', 'nc|ENSG00000186409|Q5VVM6|CCDC30', 'ENSG00000186409|ENST00000657597|CCDC30', 'CCDC30|p.V553Sfs*12|1|0.41|ENSG00000186409|chr1:42637262-42637263|-/A|frameshift_variant', 'ENST00000471390.5_1_1:43002943-43047151:+|nuORF', 'ENST00000514642.1_1_1:43002254-43055163:+|nuORF'] 51909 21683 KKRRTRRLYP True PC9_epitope_Rep6 1372.85276963304 1372.8516699358602 96.29 2 -1.3121008687864502 0.3820129413760512 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|40|2|sense'] 134377 23480 WSLSYIFFP True PC9_epitope_Rep2 1158.57498260374 1158.57334490379 95.787 3 -1.3121092661435152 0.3820129413760512 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 15441 14525 EANMDIVYKDM True H1975_Epitope_Rep2 1327.5788243078298 1327.5777299358601 61.027 2 -1.3121196397395984 0.3820129413760512 1.0 ['ENSG00000050393|ENST00000379170|MCUR1'] 68339 14644 LTSDNVIR True PC9_epitope_Rep1 916.4977949122 916.49668993586 61.151 2 -1.312218869893562 0.3820567814169908 1.0 ['ENST00000574867.5_1_17:5292093-5322970:-|nuORF', 'ENSG00000108559|ENST00000573584|NUP88'] 25851 8948 FGGAKVAG True NCI_RA007_Epitope_Rep4 705.3809742548099 705.38042496793 41.251 1 -1.312248229660575 0.3820596396418229 1.0 ['ENST00000378097.5_1_1:6052749-6100615:+|nuORF'] 5114 19721 ALLWYSEAMKL True PC9_epitope_Rep5 1323.6896950861499 1323.6885899358601 80.901 2 -1.3124104906384533 0.3820596396418229 1.0 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'nc|ENSG00000168026|Q8NDW8-6|TTC21A'] 12925 18115 DLNHCKSI True PC9_epitope_Rep5 928.4436511643601 928.44254993586 74.69 2 -1.3124987357383109 0.3820913607173149 1.0 ['nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121878388-121880774:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 134464 10254 WTQMWNRPCR True PC9_epitope_Rep2 1376.623029592 1376.6219299358602 44.774 2 -1.3125295568425839 0.3821063345126739 1.0 ['ENST00000456101.6_1_6:109766698-109772967:-|nuORF'] 137292 25515 YLGKLNLP True PC9_epitope_Rep3 916.5382031721999 916.53765496793 103.61 1 -1.3125452775712678 0.3821063345126739 1.0 ['SLFN5|p.E185G|1|0.36|ENSG00000166750|chr17:35259244-35259244|A/G|missense_variant'] 64684 25212 LRKSTFKNAK True H1975_Epitope_Rep1 1191.7087907379498 1191.70714490379 104.41 3 -1.312676637737226 0.3821138211382114 1.0 ['nc|ENSG00000173083|Q9Y251-4|HPSE', 'nc|ENSG00000173083|Q9Y251-3|HPSE', 'nc|ENSG00000173083|Q9Y251-2|HPSE', 'ENSG00000173083|ENST00000311412|HPSE'] 20289 6991 EPAKLEEI True NCI_RA007_Epitope_Rep2 927.49131254943 927.49020993586 31.815 2 -1.3127476759312877 0.38211667777306596 1.0 ['nc|ENSG00000116260|O00391-2|QSOX1', 'ENSG00000116260|ENST00000367602|QSOX1'] 17877 6782 EIDECVRN True H1975_Epitope_Rep3 976.42839502304 976.42784496793 31.041 1 -1.3127815667523346 0.38211667777306596 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 133103 14479 WARSWQVYNP True H1975_Epitope_Rep2 1305.6254550368096 1305.6243499358602 60.85 2 -1.3127850504874348 0.3821241640011631 1.0 ['ENST00000578492.5_1_17:62776963-62777681:-|nuORF'] 124291 10492 VLDFGRPI True PC9_epitope_Rep5 915.5178020807899 915.51670993586 45.343 2 -1.312814453305457 0.3821345061122621 1.0 ['CLN6|p.H144Tfs*19|1|0.19|ENSG00000128973|chr15:68211731-68211731|G/-|frameshift_variant', 'ENSG00000128973|ENST00000249806|CLN6', 'nc|ENSG00000128973|Q9NWW5-2|CLN6', 'ENST00000569336.2_2_15:68510846-68510915:-|nuORF'] 47154 11571 IWNTFFHERYL True PC9_epitope_Rep6 1524.7513838259201 1524.74974490379 55.617 3 -1.3128310644409726 0.3821345061122621 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 23022 13916 EVKEERDDIP True PC9_epitope_Rep5 1228.59354577184 1228.59244993586 58.549 2 -1.312840679667423 0.3821345061122621 1.0 ['ENST00000229405.8_1_6:35260320-35261695:+|nuORF', 'nc|ENSG00000065029|P36508-2|ZNF76', 'ENSG00000065029|ENST00000373953|ZNF76'] 19247 8777 ELLEVQQPDP True NCI_RA007_Epitope_Rep2 1166.58191845898 1166.58082993586 38.787 2 -1.3128903180621194 0.38214947722949805 1.0 ['ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A', 'ENST00000494435.5_1_21:47924311-47965916:+|nuORF'] 10507 8466 CNWKMKYVTF True PC9_epitope_Rep5 1318.62023562734 1318.6191299358602 37.507 2 -1.3128972496739455 0.38214947722949805 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5'] 57522 6639 LEKRNSDL True PC9_epitope_Rep1 973.51925863277 973.51816993586 30.342 2 -1.3129418440700382 0.3821562689279225 1.0 ['ENST00000558735.1_1_15:44581347-44620963:+|nuORF', 'ENST00000429162.2_1_15:44581227-44599615:+|nuORF', 'nc|ENSG00000166734|Q6P4E1-3|GOLM2', 'nc|ENSG00000166734|Q6P4E1-2|GOLM2', 'nc|ENSG00000166734|Q6P4E1-5|GOLM2', 'ENSG00000166734|ENST00000299957|GOLM2'] 81211 21154 PPLMLIIF True PC9_epitope_Rep6 942.5612471159 942.56014993586 94.216 2 -1.3129571423519513 0.3821562689279225 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 81073 7391 PPEPERPRF True PC9_epitope_Rep4 1123.5774422152297 1123.5763499358602 35.775 2 -1.3129677745086716 0.3821562689279225 1.0 ['ENSG00000155269|ENST00000382487|GPR78'] 136700 14693 YIHNIKDMKLL True PC9_epitope_Rep1 1386.7693423891799 1386.76824993586 61.338 2 -1.3129784800933098 0.3821562689279225 1.0 ['ENST00000586815.1_1_17:66429656-66453562:-|nuORF', 'ENST00000589459.5_1_17:66423364-66453609:-|nuORF', 'nc|ENSG00000070540|Q5MNZ9-2|WIPI1', 'ENSG00000070540|ENST00000262139|WIPI1'] 30544 6336 GAIQSLKRL True PC9_epitope_Rep5 984.6080140675199 984.60690993586 29.346 2 -1.3130848395140966 0.3821562689279225 1.0 ['nc|ENSG00000004139|Q6SZW1-2|SARM1', 'ENSG00000004139|ENST00000585482|SARM1', 'ENST00000379061.8_1_17:26708312-26722930:+|nuORF'] 9074 16192 AVKKKPKPTNP True PC9_epitope_Rep2 1206.7448418934998 1206.74374993586 67.532 2 -1.313089767458369 0.3821562689279225 1.0 ['ENST00000468376.2_1_20:45867286-45947776:-|nuORF', 'nc|ENSG00000101040|Q9ULU4-3|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-6|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-2|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-4|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-19|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-17|ZMYND8', 'ENSG00000101040|ENST00000471951|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-11|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-10|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-13|ZMYND8', 'nc|ENSG00000101040|Q9ULU4|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-20|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-5|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-9|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-16|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-22|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-12|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-14|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-18|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-21|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-8|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-23|ZMYND8', 'nc|ENSG00000101040|Q9ULU4-15|ZMYND8'] 114903 21881 TTESFEKSV True PC9_epitope_Rep5 1026.48695544498 1026.4858499358602 89.203 2 -1.3130955992911115 0.3821562689279225 1.0 ['nc|ENSG00000154743|Q8NCE0-2|TSEN2', 'ENST00000490981.1_1_3:12545028-12546775:+|nuORF', 'nc|ENSG00000154743|Q8NCE0-5|TSEN2', 'nc|ENSG00000154743|Q8NCE0-3|TSEN2', 'ENSG00000154743|ENST00000284995|TSEN2'] 32407 27378 GGGGGGGG True PC9_epitope_Rep1 474.18227444826005 474.18172496793 111.91 1 -1.3131273776997028 0.3821562689279225 1.0 ['CON__Q6IFZ6', 'ENST00000252674.8_2_19:6279890-6279947:-|nuORF', 'ENSG00000185960|ENST00000686671|SHOX', 'ENSG00000123364|ENST00000243056|HOXC13', 'LTK|p.G326Efs*48|1|0.5|ENSG00000062524|chr15:41511184-41511184|C/-|frameshift_variant', 'ENSG00000103241|ENST00000262426|FOXF1', 'nc|ENSG00000165655|Q96F45-3|ZNF503', 'ENST00000591649.5_1_19:10797828-10799985:+|nuORF', 'ENST00000555405.5_1_14:75551269-75558248:-|nuORF', 'ENST00000216019.11_1_22:38881942-38884127:-|nuORF', 'ENST00000587928.5_1_19:10794459-10799985:+|nuORF', 'ENST00000608721.1_1_6:161412512-161413208:-|nuORF', 'ENSG00000080709|ENST00000673685|KCNN2', 'ENSG00000152284|ENST00000282111|TCF7L1', 'nc|ENSG00000080709|Q9H2S1|KCNN2', 'ENST00000589239.5_1_19:14080804-14104655:-|nuORF', 'ENST00000563518.5_1_15:41799676-41805922:-|nuORF', 'nc|ENSG00000062524|P29376-3|LTK', 'ENSG00000108091|ENST00000263102|CCDC6', 'ENSG00000143869|ENST00000272224|GDF7', 'ENST00000556170.5_1_14:75553702-75572727:-|nuORF', 'nc|ENSG00000292354|O15266-2|SHOX', 'ENST00000426595.1_1_7:55955154-55973975:+|nuORF', 'ENST00000258111.4_1_12:70760395-70760632:+|nuORF', 'ENST00000317216.2_1_8:22550456-22550672:-|nuORF', 'ENST00000345425.6_1_19:14593738-14606936:-|nuORF', 'ENST00000393033.8_1_19:14603704-14606936:-|nuORF', 'SVA_D_dup132|chr1:226114299-226115980:-|1.3983671137746794|0.0922211982552955|3.92|465.0|66|2|anti-sense', 'HCN1|p.P77L|1|0.2|ENSG00000164588|chr5:45695864-45695864|G/A|missense_variant', 'FMN2|p.G49D|1|0.4|ENSG00000155816|chr1:240092255-240092255|G/A|missense_variant', 'ENST00000372324.5_1_1:44445001-44445064:+|nuORF', 'ENST00000371142.8_1_10:98346624-98346687:-|nuORF', 'ENST00000373132.3_1_1:36851434-36851494:-|nuORF', 'SVA_D_dup1026|chr13:30838585-30840641:-|4.257143864425426|0.3514679219565426|3.6|489.0|68|2|anti-sense', 'ENST00000377560.9_1_12:112820080-112820209:-|nuORF', 'nc|ENSG00000162923|Q9H7D7-4|WDR26', 'nc|ENSG00000178233|Q8IW70-2|TMEM151B', 'nc|ENSG00000162923|Q9H7D7-3|WDR26', 'SOX1|p.R124Afs*82|1|0.27|ENSG00000182968|chr13:112068027-112068027|C/-|frameshift_variant', 'ENST00000229416.10_1_6:53409297-53409843:-|nuORF', 'ENST00000507703.1_1_4:124319460-124322783:+|nuORF', 'ENST00000607598.2_1_8:9413493-9414024:-|nuORF', 'ENST00000555993.6_1_14:71267787-71275967:-|nuORF', 'nc|ENSG00000162367|P17542-3|TAL1', 'ENST00000481580.1_1_20:32664521-32665129:+|nuORF', 'ENST00000489107.1_1_9:12775714-12777225:+|nuORF', 'ENST00000491491.1_1_13:77900653-77900983:-|nuORF', 'SVA_F_dup683|chr12:56075092-56076774:-|1.8546114936796516|0.0829394271016015|4.48|483.0|75|3|anti-sense', 'FMN2|p.P879Hfs*8|1|0.13|ENSG00000155816|chr1:240207444-240207444|C/-|frameshift_variant', 'nc|ENSG00000120254|Q6UB35-2|MTHFD1L', 'ENSG00000120738|ENST00000239938|EGR1', 'ENST00000405737.2_2_13:41556342-41635296:-|nuORF', 'EGR1|p.S512Cfs*24|1|0.18|ENSG00000120738|chr5:138467978-138467994|TCAGCAGCTTCCCTTCC/-|frameshift_variant', 'ENST00000487509.6_1_16:31191511-31196501:+|nuORF', 'nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L', 'nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENST00000542519.1_1_12:6782380-6787618:-|nuORF', 'ENSG00000205922|ENST00000382349|ONECUT3', 'ENST00000378279.3_1_8:117950559-117950772:+|nuORF', 'ENST00000370544.9_1_1:87794323-87794602:+|nuORF', 'ENSG00000205476|ENST00000380243|CCDC85C', 'nc|ENSG00000179915|P58400-1|NRXN1', 'nc|ENSG00000179915|P58400|NRXN1', 'ENSG00000119547|ENST00000491143|ONECUT2', 'nc|ENSG00000130224|Q5VUJ6-2|LRCH2', 'ENSG00000130224|ENST00000317135|LRCH2', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000169083|P10275-3|AR', 'nc|ENSG00000169083|P10275-4|AR', 'ENST00000513847.5_1_X:66764886-66909456:+|nuORF', 'ENSG00000169083|ENST00000374690|AR', 'ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L', 'ENSG00000136450|ENST00000258962|SRSF1', 'SRSF1|p.E186Nfs*7|1|0.35|ENSG00000136450|chr17:58005596-58005597|TC/-|frameshift_variant', 'nc|ENSG00000136450|Q07955-3|SRSF1', 'nc|ENSG00000136450|Q07955-2|SRSF1', 'ENST00000578430.1_1_17:56083680-56084618:-|nuORF', 'ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENSG00000126247|ENST00000246533|CAPNS1', 'ENSG00000105202|ENST00000221801|FBL', 'ENST00000599159.1_1_19:40329665-40336940:-|nuORF', 'CON__Q3TTY5', 'nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'ENST00000567567.5_1_15:31233675-31258111:-|nuORF', 'ENSG00000100201|ENST00000403230|DDX17', 'nc|ENSG00000100201|Q92841-1|DDX17', 'nc|ENSG00000100201|Q92841-2|DDX17', 'ENSG00000174279|ENST00000308618|EVX2', 'ZSWIM6-NDUFAF2|2|fusion', 'ZSWIM6-NDUFAF2|1|fusion', 'nc|ENSG00000164651|Q8IXZ3|SP8', 'ENSG00000164651|ENST00000418710|SP8', 'ENSG00000138795|ENST00000265165|LEF1', 'nc|ENSG00000138795|Q9UJU2-6|LEF1', 'nc|ENSG00000138795|Q9UJU2-2|LEF1', 'nc|ENSG00000138795|Q9UJU2-5|LEF1', 'ENST00000299633.6_1_15:83876364-83876475:-|nuORF', 'ENSG00000120093|ENST00000498678|HOXB3', 'TRA2A|p.G231D|1|0.26|ENSG00000164548|chr7:23506216-23506216|C/T|missense_variant', 'nc|ENSG00000120093|P14651-3|HOXB3', 'nc|ENSG00000286219|P0DPK4|NOTCH2NLC', 'ENST00000403734.2_1_11:62494359-62494803:-|nuORF', 'ENST00000362074.7_1_1:145209278-145248834:+|nuORF', 'ENST00000256646.6_1_1:120572588-120612105:-|nuORF', 'ENST00000479412.2_1_1:120611949-120612105:-|nuORF', 'nc|ENSG00000120093|P14651-2|HOXB3', 'nc|ENSG00000136352|P43699|NKX2-1', 'ENSG00000136352|ENST00000354822|NKX2-1', 'ENSG00000169857|ENST00000306730|AVEN', 'ENSG00000184486|ENST00000328345|POU3F2', 'ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'KCNMA1|p.E329Kfs*60|1|0.17|ENSG00000156113|chr10:77110319-77110319|C/-|frameshift_variant', 'ENSG00000168772|ENST00000394767|CXXC4', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000084731|ENST00000264712|KIF3C', 'ENSG00000120254|ENST00000367321|MTHFD1L', 'ENSG00000141385|ENST00000269143|AFG3L2', 'ENSG00000171094|ENST00000389048|ALK', 'ENSG00000203782|ENST00000368742|LORICRIN', 'ENST00000418924.6_1_14:93042630-93154594:+|nuORF', 'ENSG00000100599|ENST00000216487|RIN3', 'nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17', 'nc|ENSG00000132466|O75179-3|ANKRD17', 'nc|ENSG00000132466|O75179-5|ANKRD17', 'nc|ENSG00000109534|Q9NY12-2|GAR1', 'ENST00000503671.2_1_4:110737056-110740318:+|nuORF', 'ENST00000506840.5_1_4:110736915-110743667:+|nuORF', 'ENSG00000109534|ENST00000226796|GAR1', 'ENSG00000166233|ENST00000379887|ARIH1', 'ENSG00000163214|ENST00000457308|DHX57', 'nc|ENSG00000163214|Q6P158-2|DHX57', 'DHX57|p.S709Qfs*30|1|0.28|ENSG00000163214|chr2:38848308-38848308|A/-|frameshift_variant', 'SRSF11|p.K357Sfs*62|2|0.21|ENSG00000116754|chr1:70249995-70249995|A/-|frameshift_variant', 'nc|ENSG00000116754|Q05519-2|SRSF11', 'ENSG00000116754|ENST00000370949|SRSF11', 'ENST00000469170.5_1_1:70687319-70696797:+|nuORF', 'ENSG00000177733|ENST00000314940|HNRNPA0', 'ENSG00000135631|ENST00000486777|RAB11FIP5', 'ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF', 'ENSG00000145743|ENST00000542267|FBXL17', 'nc|ENSG00000131724|P78552-2|IL13RA1', 'ENSG00000131724|ENST00000371666|IL13RA1', 'ENSG00000178573|ENST00000326043|MAF', 'nc|ENSG00000178573|O75444|MAF', 'ENSG00000119638|ENST00000238616|NEK9', 'ENST00000557026.5_1_14:75551269-75572727:-|nuORF', 'nc|ENSG00000162613|Q96AE4-2|FUBP1', 'ENSG00000162613|ENST00000370768|FUBP1', 'FUBP1|p.Q546Hfs*15|1|0.43|ENSG00000162613|chr1:77956623-77956639|GTGGCTGTGCTTGCTGT/-|frameshift_variant', 'ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3', 'nc|ENSG00000143376|Q96L92-3|SNX27', 'ENSG00000143376|ENST00000458013|SNX27', 'ENSG00000155816|ENST00000319653|FMN2', 'FMN2|p.P1167Lfs*108|1|0.21|ENSG00000155816|chr1:240208308-240208308|C/-|frameshift_variant', 'DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000130675|ENST00000252971|MNX1', 'ENST00000303538.12_1_4:39929740-39979529:-|nuORF', 'ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000181588|ENST00000402693|MEX3D', 'nc|ENSG00000181588|Q86XN8-2|MEX3D', 'nc|ENSG00000181588|Q86XN8-3|MEX3D', 'ENSG00000178233|ENST00000451188|TMEM151B', 'ENSG00000105723|ENST00000222330|GSK3A', 'ENSG00000163872|ENST00000305135|YEATS2', 'YEATS2-ATP11B|1|fusion', 'nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000273047.8_1_3:19988696-19992457:+|nuORF', 'nc|ENSG00000151322|Q8IXF0-4|NPAS3', 'nc|ENSG00000151322|Q8IXF0-2|NPAS3', 'nc|ENSG00000151322|Q8IXF0-3|NPAS3', 'ENSG00000151322|ENST00000356141|NPAS3', 'nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'ENSG00000099381|ENST00000262519|SETD1A', 'ENSG00000132005|ENST00000254325|RFX1', 'ENSG00000138606|ENST00000690270|SHF', 'ENSG00000185129|ENST00000331327|PURA', 'ENST00000301015.13_2_16:88800318-88802577:-|nuORF', 'nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000115935|O43516-4|WIPF1', 'nc|ENSG00000115935|O43516-2|WIPF1', 'ENSG00000115935|ENST00000679041|WIPF1', 'nc|ENSG00000115935|O43516-3|WIPF1', 'ENST00000307790.7_3_22:30221719-30234222:-|nuORF', 'ENSG00000142408|ENST00000270458|CACNG8', 'ENST00000238855.11_1_2:64751466-64751667:+|nuORF', 'nc|ENSG00000062524|P29376-4|LTK', 'ENSG00000062524|ENST00000263800|LTK', 'nc|ENSG00000062524|P29376-5|LTK', 'ENSG00000182968|ENST00000330949|SOX1', 'ENSG00000151615|ENST00000281321|POU4F2', 'ENSG00000169991|ENST00000455833|IFFO2', 'ADCY1|p.P287Lfs*16|1|0.35|ENSG00000164742|chr7:45610445-45610445|C/-|frameshift_variant', 'ENSG00000164742|ENST00000297323|ADCY1', 'ENSG00000251493|ENST00000615637|FOXD1', 'nc|ENSG00000162367|P17542-2|TAL1', 'ENSG00000162367|ENST00000691006|TAL1', 'nc|ENSG00000160201|Q01081-4|U2AF1', 'nc|ENSG00000160201|Q01081-2|U2AF1', 'ENSG00000160201|ENST00000291552|U2AF1', 'ENSG00000119919|ENST00000344586|NKX2-3', 'ENSG00000130449|ENST00000252744|ZSWIM6', 'nc|ENSG00000164548|Q13595-4|TRA2A', 'nc|ENSG00000164548|Q13595-3|TRA2A', 'nc|ENSG00000136527|P62995-3|TRA2B', 'ENSG00000164548|ENST00000297071|TRA2A', 'ENSG00000136527|ENST00000453386|TRA2B', 'ENSG00000161671|ENST00000334976|EMC10', 'nc|ENSG00000153266|Q8TBJ5-2|FEZF2', 'ENSG00000153266|ENST00000283268|FEZF2', 'ENSG00000177374|ENST00000619757|HIC1', 'nc|ENSG00000177374|Q14526|HIC1', 'ENSG00000061455|ENST00000407847|PRDM6', 'nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2', 'ENSG00000103489|ENST00000261381|XYLT1', 'ENSG00000128709|ENST00000249499|HOXD9', 'nc|ENSG00000139154|Q6ZN18|AEBP2', 'ENSG00000139154|ENST00000266508|AEBP2', 'ENSG00000162923|ENST00000414423|WDR26', 'nc|ENSG00000162923|Q9H7D7-2|WDR26', 'nc|ENSG00000162923|Q9H7D7|WDR26', 'ENSG00000164588|ENST00000303230|HCN1', 'HCN1|p.A702Rfs*78|1|0.17|ENSG00000164588|chr5:45262491-45262491|G/-|frameshift_variant', 'nc|ENSG00000165655|Q96F45-2|ZNF503', 'ENSG00000165655|ENST00000372524|ZNF503', 'ENSG00000171262|ENST00000397609|FAM98B', 'nc|ENSG00000197451|Q99729-3|HNRNPAB', 'nc|ENSG00000197451|Q99729-4|HNRNPAB', 'nc|ENSG00000197451|Q99729|HNRNPAB', 'ENSG00000197451|ENST00000358344|HNRNPAB', 'nc|ENSG00000276644|Q9UI36-4|DACH1', 'nc|ENSG00000276644|Q9UI36-3|DACH1', 'ENSG00000276644|ENST00000613252|DACH1', 'nc|ENSG00000276644|Q9UI36|DACH1'] 44162 12475 ILQHHAAA True NCI_RA007_Epitope_Rep5 859.46643521427 859.46532993586 54.643 2 -1.3131418765330214 0.3821562689279225 1.0 ['nc|ENSG00000186566|Q9UKJ3-2|GPATCH8', 'TMEM98-GPATCH8|1|fusion', 'ENSG00000186566|ENST00000591680|GPATCH8'] 102778 8491 SQEMNTLFRFW True PC9_epitope_Rep2 1457.6761702803296 1457.6750699358602 38.026 2 -1.3132446118887484 0.38217733047511776 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 127675 24575 VRFNPHTY True H1975_Epitope_Rep1 1032.5141136826799 1032.51300993586 101.83 2 -1.3132725369415938 0.38217733047511776 1.0 ['nc|ENSG00000139990|Q96JK2-2|DCAF5', 'nc|ENSG00000139990|Q96JK2-3|DCAF5', 'ENSG00000139990|ENST00000341516|DCAF5', 'GPHN-DCAF5|1|fusion'] 130844 17387 VVGAERLR True H1975_Epitope_Rep2 898.5348491272599 898.53374993586 72.171 2 -1.3132881668489373 0.38217733047511776 1.0 ['nc|ENSG00000170624|Q92629-3|SGCD', 'nc|ENSG00000170624|Q92629|SGCD', 'ENSG00000170624|ENST00000337851|SGCD'] 134636 18405 WWGGGSAP True NCI_RA007_Epitope_Rep5 816.3554877829599 816.35438993586 77.606 2 -1.3133429265891814 0.38217733047511776 1.0 ['ENST00000409185.5_1_2:131808281-131808602:-|nuORF'] 122795 16736 VGVLILFMFR True NCI_RA007_Epitope_Rep4 1193.69947192421 1193.69836993586 72.559 2 -1.3133885883705567 0.38217733047511776 1.0 ['nc|ENSG00000130653|Q6ZV29-2|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-3|PNPLA7', 'nc|ENSG00000130653|Q6ZV29-4|PNPLA7', 'nc|ENSG00000130653|Q6ZV29|PNPLA7', 'ENSG00000130653|ENST00000406427|PNPLA7'] 11045 6701 DDMKIKGQEKY True H1975_Epitope_Rep2 1353.65985150985 1353.6587499358602 30.686 2 -1.3134062329708998 0.38217733047511776 1.0 ['DGKE|p.S555Ffs*10|1|0.2|ENSG00000153933|chr17:56862749-56862756|CTCTAGTA/-|frameshift_variant', 'ENSG00000153933|ENST00000284061|DGKE'] 111169 12928 TLEVTLRDF True PC9_epitope_Rep1 1092.5815245361598 1092.5804299358601 54.599 2 -1.3134163444500786 0.38217733047511776 1.0 ['ENSG00000091106|ENST00000402280|NLRC4'] 61362 4179 LLEGTPDTP True H1975_Epitope_Rep1 941.4705771048499 941.46948993586 21.022 2 -1.313459156003936 0.38217733047511776 1.0 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 5519 16509 ANDNSPFVLYL True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 68.872 2 -1.3135006636162365 0.38217733047511776 1.0 ['PCDHB11|p.P564L|2|0.27|ENSG00000197479|chr5:141201465-141201465|C/T|missense_variant'] 129741 21035 VTKKGSGS True PC9_epitope_Rep3 762.42356734278 762.42246993586 86.189 2 -1.313531602837542 0.38217733047511776 1.0 ['ENST00000420610.1_1_Y:14088999-14090148:+|nuORF'] 76592 1717 NTEMNKTRPLS True H1975_Epitope_Rep1 1289.63978477161 1289.63812490379 8.9034 3 -1.3135375655545127 0.38217733047511776 1.0 ['ENST00000560341.2_1_15:40348684-40349006:+|nuORF'] 26972 7405 FLKKKKKERKK True NCI_RA007_Epitope_Rep2 1459.9714877833896 1459.97038993586 33.43 2 -1.31354804812267 0.38217733047511776 1.0 ['ENST00000078429.8_1_19:3121435-3121495:+|nuORF'] 100378 12371 SLNLAEPVWKQ True PC9_epitope_Rep2 1283.68738658703 1283.68573490379 52.896 3 -1.3135874445512643 0.38217733047511776 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000566635.5_1_15:28356911-28362639:-|nuORF', 'ENST00000568206.1_1_15:28360544-28362081:-|nuORF'] 3752 4611 AGTGGAGP True H1975_Epitope_Rep3 586.27108945266 586.27054496793 22.858 1 -1.3136812802934354 0.38217733047511776 1.0 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000570453.1_1_17:47657528-47657804:+|nuORF'] 38269 14917 HFFFLWKL True NCI_RA007_Epitope_Rep5 1136.61712219924 1136.61602993586 64.045 2 -1.3137024360861214 0.38217733047511776 1.0 ['ENST00000360409.7_1_2:206659803-206659965:+|nuORF'] 10299 12232 CHDGDETI True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 53.701 2 -1.3137053979944238 0.38217733047511776 1.0 ['ENSG00000120690|ENST00000239882|ELF1', 'nc|ENSG00000120690|P32519-2|ELF1'] 70091 24160 LYILAAKTL True NCI_RA007_Epitope_Rep2 1004.6270181766 1004.62592993586 101.48 2 -1.313744540210658 0.38217733047511776 1.0 ['ENSG00000205670|ENST00000399292|SMIM11'] 3507 15963 AGLQKKHW True NCI_RA007_Epitope_Rep3 966.5399345076999 966.53882993586 70.464 2 -1.31376903489478 0.38217733047511776 1.0 ['ENST00000515803.5_1_5:16711340-16738347:-|nuORF'] 130978 25275 VVKIGLGVL True NCI_RA007_Epitope_Rep1 896.6058888091999 896.60534496793 104.58 1 -1.3137730090314113 0.38217733047511776 1.0 ['ENSG00000167355|ENST00000300773|OR51B5'] 12408 22233 DKEYNKCEM True PC9_epitope_Rep1 1158.46854558286 1158.46690490379 90.342 3 -1.3137801317223958 0.3821801843262162 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.N3720Kfs*28|2|0.54|ENSG00000157423|chr16:70868720-70868721|-/T|frameshift_variant'] 137583 15380 YLSRIVIFI True PC9_epitope_Rep6 1122.68011637862 1122.6790099358602 71.305 2 -1.3137894008425939 0.3821801843262162 1.0 ['ENSG00000139679|ENST00000620633|LPAR6'] 3675 9918 AGRPRGGPPV True PC9_epitope_Rep1 962.5409971368598 962.53990993586 43.009 2 -1.3138091906068325 0.3821951485352355 1.0 ['ENST00000308893.8_1_16:29985169-29989140:+|nuORF'] 128019 2453 VRREILGEESC True NCI_RA007_Epitope_Rep1 1289.6397847716098 1289.63812490379 12.937 3 -1.3139098738427668 0.3821951485352355 1.0 ['ENST00000508689.1_1_5:138629669-138643017:+|nuORF'] 68151 19955 LTPQQVREIC True PC9_epitope_Rep1 1185.6175927750498 1185.61648993586 81.579 2 -1.3141458101871462 0.38223718468823037 1.0 ['nc|ENSG00000078043|O75928-2|PIAS2'] 124987 19699 VLNKRKYRS True NCI_RA007_Epitope_Rep2 1162.69347502698 1162.6923699358601 81.574 2 -1.3141608533093219 0.38223718468823037 1.0 ['ENSG00000166289|ENST00000436066|PLEKHF1'] 44971 24396 IQHQRIHFG True PC9_epitope_Rep4 1134.6046600225798 1134.60301490379 102.32 3 -1.314161157027588 0.38223718468823037 1.0 ['ENSG00000185869|ENST00000391711|ZNF829', 'nc|ENSG00000185869|Q3KNS6-3|ZNF829'] 42631 22857 IETLSGKKR True PC9_epitope_Rep5 1030.61349337078 1030.6123899358602 92.917 2 -1.3141654040991335 0.38223718468823037 1.0 ['chr10:5004014-5005970|265|142.77|0.0|23.77|-|2|TE_info:L1M4c,L1M4c_dup2264,L1,LINE,donor,+,5005970,5006355|AKR1C2,None|5'] 77090 6316 NWTQVTSFVL True PC9_epitope_Rep2 1193.6080736371698 1193.60641490379 29.692 3 -1.3142635154979405 0.38227921676899046 1.0 ['ENSG00000181499|ENST00000321252|OR6T1'] 99109 11887 SLAFGASY True H1975_Epitope_Rep3 814.3861192049001 814.3855749679301 50.873 1 -1.3143185555720855 0.38227921676899046 1.0 ['ENST00000494463.1_1_1:160606951-160616738:-|nuORF', 'nc|ENSG00000117090|Q13291-2|SLAMF1', 'nc|ENSG00000117090|Q13291-3|SLAMF1', 'ENSG00000117090|ENST00000302035|SLAMF1', 'nc|ENSG00000117090|Q13291-4|SLAMF1'] 55605 25150 LCRQVPVPQW True PC9_epitope_Rep1 1224.6437479532399 1224.64210490379 101.62 3 -1.314352488824676 0.38227921676899046 1.0 ['ENST00000482462.1_1_7:540672-552294:-|nuORF'] 32819 18096 GIGFRQPK True NCI_RA007_Epitope_Rep1 901.51338540669 901.5128349679301 74.531 1 -1.3143591913370418 0.38227921676899046 1.0 ['ENST00000310483.10_2_1:153936131-153940173:-|nuORF'] 123858 7499 VIYQNDEK True NCI_RA007_Epitope_Rep3 1007.4923751785899 1007.49126993586 36.62 2 -1.314394767657018 0.38228669685887967 1.0 ['ENST00000486390.1_1_1:16767863-16768082:+|nuORF'] 59252 11441 LGGPNPGSRGL True PC9_epitope_Rep4 1023.5461420869499 1023.54504993586 51.776 2 -1.314423598640887 0.38230628579731907 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 139540 22265 YTLLFDTSFF True PC9_epitope_Rep5 1252.6015912743999 1252.6004899358602 90.649 2 -1.3144851615834197 0.38233798314443473 1.0 ['ENST00000452722.7_1_11:115046973-115047108:-|nuORF'] 76443 15600 NSWWVYPA True PC9_epitope_Rep1 1021.4657665079297 1021.46466993586 64.825 2 -1.3145440477431052 0.3823575709874675 1.0 ['SLC4A5|p.P828S|1|0.17|ENSG00000188687|chr2:74233515-74233515|G/A|missense_variant'] 34265 12251 GPLETEEY True H1975_Epitope_Rep3 936.40764249512 936.4070949679301 52.301 1 -1.3145819958598985 0.38235863906041895 1.0 ['LILRB5|p.S387Rfs*73|1|0.17|ENSG00000105609|chr19:54254825-54254831|GGGCTGA/-|frameshift_variant', 'nc|ENSG00000105609|O75023-2|LILRB5', 'nc|ENSG00000105609|O75023|LILRB5', 'ENSG00000105609|ENST00000449561|LILRB5'] 104344 14688 SSEVSVCSEPV True H1975_Epitope_Rep2 1121.4910548492498 1121.48994993586 61.658 2 -1.3146403458052283 0.38235863906041895 1.0 ['ENSG00000171608|ENST00000377346|PIK3CD'] 134178 14173 WRLLGLGV True NCI_RA007_Epitope_Rep4 912.5545219426798 912.55342993586 61.796 2 -1.3146412300451695 0.38235863906041895 1.0 ['ENST00000445174.5_1_2:216480087-216485873:-|nuORF'] 57779 15050 LEPATLARSL True PC9_epitope_Rep5 1069.61315901761 1069.61206993586 62.896 2 -1.3146441723970335 0.38235863906041895 1.0 ['ENSG00000237412|ENST00000617714|PRSS56'] 13023 9243 DLQQWIEVDAR True H1975_Epitope_Rep1 1371.67827845531 1371.67718993586 40.465 2 -1.3146524375337705 0.38235863906041895 1.0 ['ENST00000368854.7_1_10:125528237-125699754:-|nuORF', 'ENSG00000121898|ENST00000241305|CPXM2'] 46928 14547 IVLGRTNL True PC9_epitope_Rep4 884.5443511818 884.54324993586 63.868 2 -1.3148726047309678 0.38239033308714027 1.0 ['IGDCC4|p.T872Hfs*22|1|0.15|ENSG00000103742|chr15:65388901-65388902|-/G|frameshift_variant', 'ENSG00000103742|ENST00000352385|IGDCC4'] 75096 1048 NMQKARELWD True PC9_epitope_Rep5 1289.61865540421 1289.61700490379 5.8042 3 -1.315088603481288 0.38244624176675707 1.0 ['nc|ENSG00000075856|Q15020-4|SART3', 'ENSG00000075856|ENST00000546815|SART3'] 75213 12051 NPEREIEVPD True H1975_Epitope_Rep1 1196.567331024 1196.56622993586 51.364 2 -1.3151281951857008 0.3824658264017532 1.0 ['ENST00000406175.3_1_2:42513330-42557344:+|nuORF', 'nc|ENSG00000143924|Q9HC35-2|EML4', 'ENSG00000143924|ENST00000318522|EML4'] 108051 4995 TDGECVFPFHY True H1975_Epitope_Rep3 1313.5386737480098 1313.5375699358601 24.342 2 -1.3151944920948293 0.3824733031455069 1.0 ['ENSG00000188334|ENST00000344839|BSPH1'] 57882 13720 LEQFRVAHED True PC9_epitope_Rep2 1242.59929985862 1242.59820993586 58.065 2 -1.3152405102605311 0.38249288697863065 1.0 ['ENSG00000164610|ENST00000297157|RP9'] 77478 25147 NYPNIFRIS True PC9_epitope_Rep5 1122.5821932425 1122.58054490379 101.87 3 -1.3152650935174899 0.38250036321371494 1.0 ['CNGA2|p.I487Mfs*21|1|0.55|ENSG00000183862|chrX:151743964-151743964|C/-|frameshift_variant', 'ENSG00000183862|ENST00000329903|CNGA2', 'ENSG00000198515|ENST00000514170|CNGA1'] 23263 19743 EVRLRFLSYED True NCI_RA007_Epitope_Rep2 1425.7252286477299 1425.7241299358602 81.754 2 -1.3153510480665211 0.3825348975169191 1.0 ['ENSG00000159915|ENST00000683810|ZNF233'] 122969 9166 VGWPCLGPIS True H1975_Epitope_Rep2 1027.51608782863 1027.51498993586 40.209 2 -1.3153742024711461 0.3825348975169191 1.0 ['ENSG00000234409|ENST00000439765|CCDC188'] 139726 5257 YTWRWVWSWEW True NCI_RA007_Epitope_Rep5 1683.7622828627896 1683.76063490379 26.917 3 -1.3153790770662062 0.3825348975169191 1.0 ['ENST00000419548.4_1_20:3670209-3670299:-|nuORF'] 60194 6951 LIAGSVGF True PC9_epitope_Rep5 762.42759009406 762.42648993586 31.706 2 -1.3155114676249782 0.3825544794188862 1.0 ['ENSG00000137103|ENST00000643932|TMEM8B', 'nc|ENSG00000137103|A6NDV4|TMEM8B'] 5403 12921 ALVPGRRA True PC9_epitope_Rep5 838.51371975986 838.51262993586 54.711 2 -1.3155492627045593 0.3825573230672381 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 18458 9163 EKKEESEEE True H1975_Epitope_Rep1 1135.48807764379 1135.48698993586 40.152 2 -1.315574226754483 0.3825573230672381 1.0 ['ENSG00000197816|ENST00000529487|CCDC180', 'ENST00000375206.6_1_9:100053158-100139173:+|nuORF', 'nc|ENSG00000197816|Q9P1Z9|CCDC180', 'ENST00000494917.6_1_9:100069637-100105846:+|nuORF', 'ENST00000460482.6_1_9:100070037-100107975:+|nuORF', 'ENST00000530011.1_1_9:100092818-100111440:+|nuORF', 'ENST00000529787.2_1_9:100092438-100109914:+|nuORF'] 22632 3643 ETQTQRRGWPL True NCI_RA007_Epitope_Rep2 1370.7054962626598 1370.70385490379 18.82 3 -1.3157050976865559 0.38257690398653804 1.0 ['ENST00000477976.5_1_1:880048-880436:-|nuORF'] 118464 9195 VDRAEVPP True PC9_epitope_Rep1 881.4606811274899 881.45958993586 40.219 2 -1.315823924303172 0.38262638001162114 1.0 ['ENSG00000182749|ENST00000675840|PAQR7'] 89891 16819 RFREMLRWFLV True H1975_Epitope_Rep1 1551.8496583985498 1551.8480249037898 70.103 3 -1.315942174507132 0.38262638001162114 1.0 ['nc|ENSG00000141867|O60885-3|BRD4'] 63711 10606 LPQNNTLVAL True PC9_epitope_Rep5 1081.61315901761 1081.61206993586 45.785 2 -1.3159425081928788 0.38262638001162114 1.0 ['ENSG00000143756|ENST00000366862|FBXO28', 'ENST00000519894.1_1_1:224301987-224318335:+|nuORF', 'ENST00000483773.1_1_1:224301900-224321920:+|nuORF', 'nc|ENSG00000143756|Q9NVF7-2|FBXO28'] 66373 18949 LSRACPCPQV True PC9_epitope_Rep5 1072.5157705588 1072.5146699358602 77.911 2 -1.315962112658467 0.38262638001162114 1.0 ['ENST00000547687.1_1_16:89712476-89713182:-|nuORF'] 100369 12336 SLNILGNPQV True PC9_epitope_Rep1 1053.58185888933 1053.5807699358602 52.307 2 -1.3159769990888395 0.38262638001162114 1.0 ['nc|ENSG00000144445|A0AUZ9-4|KANSL1L', 'KANSL1L|p.W684Cfs*14|1|0.16|ENSG00000144445|chr2:210031524-210031525|-/CA|frameshift_variant', 'nc|ENSG00000144445|A0AUZ9-3|KANSL1L', 'nc|ENSG00000144445|A0AUZ9-2|KANSL1L', 'ENSG00000144445|ENST00000281772|KANSL1L'] 3344 7091 AGHITAPDP True NCI_RA007_Epitope_Rep2 877.4293809992099 877.42828993586 32.205 2 -1.3161184553254484 0.38265343178791916 1.0 ['ENSG00000151093|ENST00000280701|OXSM', 'nc|ENSG00000151093|Q9NWU1-2|OXSM'] 69562 7930 LVTGLVGI True NCI_RA007_Epitope_Rep1 770.49019035062 770.48908993586 34.839 2 -1.3161294231732013 0.38265343178791916 1.0 ['SH3RF2|p.R427L|1|0.41|ENSG00000156463|chr5:146049203-146049203|G/T|missense_variant'] 80195 22333 PLAFWRKQL True PC9_epitope_Rep4 1157.6709486772497 1157.6698499358602 94.141 2 -1.3162744489342246 0.3826925870333608 1.0 ['ENSG00000137875|ENST00000260442|BCL2L10'] 127235 20821 VQIIKPLP True H1975_Epitope_Rep3 906.5902387450599 906.58914993586 86.977 2 -1.3162868226143312 0.3826925870333608 1.0 ['ENSG00000154447|ENST00000284637|SH3RF1', 'nc|ENSG00000154447|Q7Z6J0-3|SH3RF1'] 76831 6966 NVGAPEAGTV True PC9_epitope_Rep3 913.4505103666099 913.44940993586 31.806 2 -1.3163159619977127 0.38270289898928767 1.0 ['chr18:39751360-39800069|451|13.46|0.51|4.74|-|0|MIR924HG,MIR924HG|1', 'ENST00000591629.1_1_18:37115485-37380062:-|nuORF'] 16227 6493 EEFYKYMLRDI True H1975_Epitope_Rep2 1505.7224517664097 1505.72080490379 29.891 3 -1.3163240760918309 0.38270289898928767 1.0 ['SPHKAP|p.R1196K|1|0.19|ENSG00000153820|chr2:228017267-228017267|C/T|missense_variant'] 57423 6676 LEIIIYCTGAF True NCI_RA007_Epitope_Rep1 1241.6365968841299 1241.63548993586 29.979 2 -1.3163791559911038 0.38270289898928767 1.0 ['nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'BAG4-FGFR1|1|fusion', 'BAG4-FGFR1|2|fusion', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-3|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-8|FGFR1', 'nc|ENSG00000077782|P11362-9|FGFR1', 'nc|ENSG00000077782|P11362-10|FGFR1', 'nc|ENSG00000077782|P11362-11|FGFR1', 'nc|ENSG00000077782|P11362-12|FGFR1', 'nc|ENSG00000077782|P11362-13|FGFR1', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion'] 36178 12583 GVFLPAGI True NCI_RA007_Epitope_Rep5 772.4483255386399 772.44722993586 55.054 2 -1.3164697636543745 0.38272247506536267 1.0 ['ENST00000555241.5_2_14:64663518-64663803:+|nuORF'] 69813 17320 LWVSEWGHWNR True PC9_epitope_Rep2 1468.7000169593998 1468.69890993586 71.88 2 -1.3164905643050255 0.3827253140962018 1.0 ['ENST00000394893.5_1_7:75615553-75615796:+|nuORF'] 100956 16760 SLSRPGPAAPV True PC9_epitope_Rep6 1050.5821932425 1050.58108993586 76.959 2 -1.3164964307596358 0.3827253140962018 1.0 ['nc|ENSG00000099849|Q02833-3|RASSF7', 'nc|ENSG00000099849|Q02833-2|RASSF7', 'ENSG00000099849|ENST00000397583|RASSF7'] 74848 21006 NLQEFRFM True PC9_epitope_Rep1 1083.51715045779 1083.51604993586 85.627 2 -1.3165788391263664 0.3827281529895909 1.0 ['ENSG00000006831|ENST00000357103|ADIPOR2', 'ADIPOR2|p.G377S|1|0.58|ENSG00000006831|chr12:1786040-1786040|G/A|missense_variant'] 66114 11777 LSNTARLEI True PC9_epitope_Rep3 1015.5662088251898 1015.56510993586 50.318 2 -1.3166104602559372 0.3827281529895909 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 114538 23803 TSHQWPKQRE True H1975_Epitope_Rep2 1295.6370823496698 1295.63542490379 98.063 3 -1.3167039884095177 0.3827551983733146 1.0 ['nc|ENSG00000226807|Q6ZUA9|MROH5'] 29497 25553 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 106.33 3 -1.3167682571611312 0.3827551983733146 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 65747 9573 LSIDWRDP True PC9_epitope_Rep6 1000.4977949121999 1000.49668993586 47.123 2 -1.3168604203245793 0.38277760968229957 1.0 ['ENSG00000053328|ENST00000338882|METTL24'] 66769 8776 LSVADQDKVF True H1975_Epitope_Rep1 1120.5764391557198 1120.57534993586 38.688 2 -1.3168836128707158 0.38277760968229957 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant'] 37283 17419 GVVPGVLEPA True PC9_epitope_Rep5 936.5280324113198 936.52692993586 72.003 2 -1.3169174097831446 0.38277760968229957 1.0 ['ENST00000538906.5_2_16:31084355-31084742:-|nuORF'] 13031 20783 DLQSLGRD True NCI_RA007_Epitope_Rep1 902.4457593393399 902.44521496793 85.074 1 -1.3169781005342827 0.3827832843190647 1.0 ['ENSG00000168065|ENST00000301891|SLC22A11'] 107482 16201 TAAFNKDALLN True PC9_epitope_Rep5 1176.6138872935999 1176.61278993586 67.308 2 -1.3169989925407708 0.3827832843190647 1.0 ['ENSG00000171608|ENST00000377346|PIK3CD'] 113279 10364 TQGQAFSL True PC9_epitope_Rep6 850.4184819623399 850.41793496793 50.587 1 -1.3170215224110098 0.3827832843190647 1.0 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000586276.5_1_17:42928644-42931004:-|nuORF'] 25689 17932 FFFKRWGLALL True NCI_RA007_Epitope_Rep4 1396.8019628467998 1396.8008699358602 77.594 2 -1.3170333823385962 0.3827832843190647 1.0 ['ENST00000360150.8_1_12:29491470-29491608:-|nuORF'] 56611 11476 LDYESRRLY True PC9_epitope_Rep5 1213.60913626633 1213.60802993586 49.139 2 -1.3172120234501319 0.38280673306146157 1.0 ['CDH10|p.N500Mfs*7|1|0.17|ENSG00000040731|chr5:24498414-24498414|T/-|frameshift_variant', 'CDH10|p.D763Ifs*13|1|0.22|ENSG00000040731|chr5:24487743-24487743|C/-|frameshift_variant', 'ENSG00000040731|ENST00000264463|CDH10'] 90767 27100 RKRLFPVRFLD True H1975_Epitope_Rep2 1445.8619373344097 1445.86030490379 111.87 3 -1.3172163239437165 0.38280673306146157 1.0 ['ENST00000484749.5_1_1:228360905-228363211:+|nuORF', 'ENST00000546123.2_1_1:228362303-228363211:+|nuORF', 'ENSG00000181873|ENST00000366711|IBA57'] 27446 10577 FNNSEYHL True PC9_epitope_Rep3 1022.4457593393402 1022.4446699358599 45.631 2 -1.3172255554110857 0.38280673306146157 1.0 ['ENSG00000090402|ENST00000264382|SI'] 111393 10372 TLKAKSEI True PC9_epitope_Rep1 888.5280324113199 888.52692993586 44.78 2 -1.3172965940624983 0.38280673306146157 1.0 ['ENSG00000177853|ENST00000316045|ZNF518A', 'ZNF518A|p.L1107Ffs*8|1|0.21|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant', 'nc|ENSG00000177853|Q6AHZ1-2|ZNF518A'] 4441 4272 AIWVTGWG True NCI_RA007_Epitope_Rep1 888.4493881677998 888.44828993586 20.73 2 -1.3173163635375709 0.38280673306146157 1.0 ['ENSG00000149418|ENST00000278742|ST14'] 69201 19900 LVMRSPHSDV True PC9_epitope_Rep5 1139.57572796307 1139.57462993586 81.6 2 -1.3173163722931307 0.38280673306146157 1.0 ['ENSG00000169071|ENST00000375708|ROR2'] 101590 13110 SPELLRCSRRR True H1975_Epitope_Rep3 1371.75173526243 1371.7506299358602 55.674 2 -1.317401849472609 0.38280673306146157 1.0 ['ENSG00000183734|ENST00000331289|ASCL2'] 2879 5208 AEYPDFFAL True PC9_epitope_Rep3 1071.49131254943 1071.49020993586 25.114 2 -1.3174029317073879 0.38280673306146157 1.0 ['ENSG00000165349|ENST00000374299|SLC7A3'] 39519 16674 HPESFFSK True PC9_epitope_Rep5 977.46068112749 977.45958993586 69.14 2 -1.3175160933939951 0.3828337709798037 1.0 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3131970-3189635:+|nuORF'] 94202 8004 RWNRETWSPWP True H1975_Epitope_Rep3 1513.7214806799698 1513.72038993586 35.758 2 -1.3175215265346303 0.3828337709798037 1.0 ['ENST00000501122.2_1_11:65191387-65191489:+|nuORF'] 121889 9899 VGPGLDVR True PC9_epitope_Rep5 811.45520182423 811.45410993586 43.046 2 -1.317546233730123 0.38286364241375553 1.0 ['ENST00000526878.5_1_11:459265-459352:+|nuORF'] 55393 7780 LASTASIF True PC9_epitope_Rep5 808.43306939732 808.43196993586 34.871 2 -1.3175492565260425 0.38286364241375553 1.0 ['nc|ENSG00000143552|Q5VU65-2|NUP210L', 'ENSG00000143552|ENST00000368559|NUP210L'] 93776 23584 RTSVTRRRSRS True PC9_epitope_Rep5 1360.77597586432 1360.77433490379 95.697 3 -1.3175534137784828 0.38286364241375553 1.0 ['ENSG00000167978|ENST00000301740|SRRM2', 'nc|ENSG00000167978|Q9UQ35-2|SRRM2', 'SRRM2|p.A2229Cfs*22|1|0.08|ENSG00000167978|chr16:2767209-2767231|CCTTGCCAGCAGGATTCCTGCAG/-|frameshift_variant', 'SRRM2|p.D2086*|1|0.13|ENSG00000167978|chr16:2766782-2766783|-/G|frameshift_variant'] 111292 18047 TLHHLALI True PC9_epitope_Rep1 916.54943656224 916.54832993586 74.209 2 -1.317599665979979 0.38286364241375553 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 64778 14164 LRSPRRSLYKL True H1975_Epitope_Rep3 1387.84120188983 1387.84010993586 59.814 2 -1.3176659048172827 0.38287857704640327 1.0 ['nc|ENSG00000129197|Q86UA6-6|RPAIN', 'nc|ENSG00000129197|Q86UA6-5|RPAIN', 'nc|ENSG00000129197|Q86UA6-7|RPAIN', 'ENST00000572174.5_1_17:5323530-5326157:+|nuORF', 'ENST00000575711.1_1_17:5323530-5324864:+|nuORF', 'nc|ENSG00000129197|Q86UA6-3|RPAIN', 'nc|ENSG00000129197|Q86UA6-4|RPAIN', 'nc|ENSG00000129197|Q86UA6-9|RPAIN', 'nc|ENSG00000129197|Q86UA6-2|RPAIN', 'ENST00000571043.5_1_17:5323428-5329403:+|nuORF', 'ENSG00000129197|ENST00000381209|RPAIN', 'nc|ENSG00000129197|Q86UA6-8|RPAIN'] 8646 14959 AVAQFKKY True PC9_epitope_Rep3 953.5334521449299 953.53234993586 62.671 2 -1.3176916264150433 0.38287857704640327 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 68513 6048 LTVPVKAPS True NCI_RA007_Epitope_Rep5 910.5487678559 910.54766993586 29.945 2 -1.3177884249641971 0.3829084441433048 1.0 ['nc|ENSG00000156990|Q6P087-6|RPUSD3', 'nc|ENSG00000156990|Q6P087-2|RPUSD3', 'ENSG00000156990|ENST00000383820|RPUSD3', 'nc|ENSG00000156990|Q6P087|RPUSD3'] 63701 6323 LPQGRKGA True H1975_Epitope_Rep3 825.4820852784098 825.48098993586 29.315 2 -1.317834491961008 0.3829084441433048 1.0 ['nc|ENSG00000162981|Q96KN4-2|LRATD1'] 61777 5695 LLKIYRNIP True NCI_RA007_Epitope_Rep2 1128.70191445236 1128.70027490379 26.768 3 -1.3178427709806135 0.3829084441433048 1.0 ['nc|ENSG00000131969|Q7Z5M8-2|ABHD12B', 'ENSG00000131969|ENST00000337334|ABHD12B'] 114756 18263 TSVQLLQRL True PC9_epitope_Rep1 1056.6291434349198 1056.6280499358602 75.039 2 -1.3178583475151633 0.3829084441433048 1.0 ['ABCB5|p.D1068Y|2|0.44|ENSG00000004846|chr7:20743054-20743054|G/T|missense_variant', 'nc|ENSG00000004846|Q2M3G0-1|ABCB5', 'ABCB5|p.G1204Efs*5|1|0.29|ENSG00000004846|chr7:20755459-20755459|G/-|frameshift_variant', 'ENSG00000004846|ENST00000404938|ABCB5'] 16060 16880 EEARLALR True NCI_RA007_Epitope_Rep3 956.5403284305198 956.53922993586 74.269 2 -1.3179816432819078 0.3829354756748255 1.0 ['nc|ENSG00000114654|Q9HA90|EFCC1', 'ENSG00000114654|ENST00000683648|EFCC1'] 60936 24020 LKYLNKIKPP True NCI_RA007_Epitope_Rep4 1212.7594293284799 1212.75778490379 104.14 3 -1.3180085204745933 0.3829354756748255 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 116544 9177 TYFAIDSSTG True PC9_epitope_Rep2 1060.47130538084 1060.47020993586 40.638 2 -1.3181301377093175 0.3829429414896191 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 122524 12507 VGSTLLKEV True PC9_epitope_Rep2 944.55424715916 944.55314993586 53.417 2 -1.3181710330547773 0.3829457739492342 1.0 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4', 'PLEKHG4|p.G398Afs*4|1|0.14|ENSG00000196155|chr16:67282284-67282284|G/-|frameshift_variant', 'ENST00000393966.1_1_16:67314567-67316137:+|nuORF'] 57487 24623 LEKKRKLRKIE True PC9_epitope_Rep3 1439.9300168942298 1439.92837490379 100.08 3 -1.3181867498190287 0.3829457739492342 1.0 ['ENST00000526725.1_1_11:108211081-108276220:-|nuORF', 'nc|ENSG00000166323|Q8NCR3-2|MFI', 'ENSG00000166323|ENST00000393084|C11orf65'] 66681 9928 LSSYGIDK True H1975_Epitope_Rep1 881.44944773745 881.44834993586 43.124 2 -1.3182193230398853 0.38294680555051475 1.0 ['ENSG00000213886|ENST00000377050|UBD'] 120150 11514 VFLADGKE True PC9_epitope_Rep3 877.4545331178899 877.45342993586 49.292 2 -1.318229930132039 0.38294680555051475 1.0 ['DCDC1|p.I1627Kfs*18|1|0.15|ENSG00000170959|chr11:30894261-30894261|A/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.M1392*|1|0.16|ENSG00000170959|chr11:30905096-30905096|C/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8-2|DCDC1', 'nc|ENSG00000170959|M0R2J8-3|DCDC1'] 64795 22364 LRVRRDLQRQ True PC9_epitope_Rep6 1338.7956486797398 1338.79399490379 98.994 3 -1.3182936359623154 0.38294680555051475 1.0 ['ENST00000421812.2_1_1:120165667-120165793:-|nuORF'] 134665 22220 WWNAYILFYER True H1975_Epitope_Rep3 1559.7561348531897 1559.75393987172 92.924 4 -1.3183011739348467 0.38294680555051475 1.0 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X'] 13364 6449 DNDGSTALSIA True PC9_epitope_Rep3 1062.4829326937 1062.48182993586 29.832 2 -1.3183043118889726 0.38294680555051475 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'nc|ENSG00000107104|Q14678-2|KANK1'] 124243 8138 VLCFVLCPRAK True H1975_Epitope_Rep3 1247.6882556175099 1247.6871499358601 36.28 2 -1.3183592809396159 0.3829542705056859 1.0 ['ENST00000517417.2_1_5:140892285-140892435:+|nuORF'] 63124 7641 LNPQVLQQ True PC9_epitope_Rep5 938.51853035678 938.51742993586 34.338 2 -1.3184564137231 0.38298412852027486 1.0 ['ENSG00000095564|ENST00000265990|BTAF1'] 128265 11283 VSAKTERAL True PC9_epitope_Rep1 973.5556441414899 973.55454993586 48.279 2 -1.3184625294803276 0.38298412852027486 1.0 ['ENST00000361246.6_1_14:103399940-103400018:-|nuORF'] 125086 25402 VLPGKKKKKT True NCI_RA007_Epitope_Rep5 1125.75976368165 1125.75811490379 105.24 3 -1.3184849540450518 0.38298412852027486 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 133553 24006 WHRQDWTI True PC9_epitope_Rep4 1140.54647644012 1140.54484490379 100.81 3 -1.3185039103517129 0.38298412852027486 1.0 ['nc|ENSG00000119979|Q8TCE6-2|DENND10', 'ENSG00000119979|ENST00000361432|DENND10', 'ENST00000498549.2_1_10:120879899-120896577:+|nuORF', 'nc|ENSG00000221930|Q6NSW5|DENND10P1', 'ENST00000592932.1_1_X:129629132-129630203:+|nuORF'] 108869 7657 TERLLTPNP True H1975_Epitope_Rep3 1039.56620882519 1039.5651099358602 34.434 2 -1.3185780107585168 0.3829869595722546 1.0 ['ENST00000596390.1_1_19:7587636-7590109:+|nuORF', 'ENST00000394321.9_1_19:7587636-7592563:+|nuORF', 'MCOLN1|p.H280Tfs*92|1|0.17|ENSG00000090674|chr19:7528216-7528216|C/-|frameshift_variant', 'ENSG00000090674|ENST00000264079|MCOLN1'] 16194 7874 EEFDRLCVPLF True NCI_RA007_Epitope_Rep1 1366.6591232338599 1366.65748490379 34.621 3 -1.3185806102270232 0.3829869595722546 1.0 ['ENSG00000153207|ENST00000648844|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-3|AHCTF1', 'nc|ENSG00000153207|Q8WYP5-2|AHCTF1', 'AHCTF1|p.E1023Rfs*10|1|0.2|ENSG00000153207|chr1:246876163-246876163|C/-|frameshift_variant', 'ENST00000470300.5_1_1:247027247-247061635:-|nuORF'] 60408 5511 LIIYYVWMKAI True PC9_epitope_Rep2 1411.7937662318698 1411.7921249037902 26.589 3 -1.3186219701832573 0.3829897904872502 1.0 ['ENST00000272067.10_2_2:272273-275200:+|nuORF'] 28342 7733 FSCYDYQRQPD True H1975_Epitope_Rep1 1420.57176478144 1420.57066993586 34.706 2 -1.3186320697941971 0.3829897904872502 1.0 ['RPN1|p.R263C|1|0.26|ENSG00000163902|chr3:128632004-128632004|G/A|missense_variant'] 84010 7263 QENKNLPQAV True H1975_Epitope_Rep1 1139.5934862021898 1139.5923899358602 32.947 2 -1.3186677342216324 0.38299725410976304 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 133456 18183 WGLAAGGG True H1975_Epitope_Rep2 687.33402406239 687.3334749679301 75.371 1 -1.3187868427862444 0.38301681383815167 1.0 ['nc|ENSG00000183688|Q8N5W9|RFLNB'] 81546 6645 PRARMPCSP True NCI_RA007_Epitope_Rep2 1013.48989016413 1013.4893749679301 30.458 1 -1.3190350712901482 0.38308319324682233 1.0 ['ENST00000587374.5_3_17:73845777-73851378:-|nuORF'] 3447 8028 AGLFKVSD True NCI_RA007_Epitope_Rep4 835.44396843419 835.44286993586 37.645 2 -1.319036861356789 0.38308319324682233 1.0 ['ENST00000492115.2_1_9:97041094-97054826:+|nuORF'] 2187 9153 AENEKLILEH True H1975_Epitope_Rep1 1194.6244519773 1194.62334993586 40.113 2 -1.3190474649222037 0.38308319324682233 1.0 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129805634-129873545:-|nuORF', 'ENST00000503565.5_1_4:129797755-129812285:-|nuORF', 'nc|ENSG00000151466|Q96NL6-3|SCLT1', 'nc|ENSG00000151466|Q96NL6-2|SCLT1'] 124973 8650 VLNESGRIY True H1975_Epitope_Rep1 1049.5505587610498 1049.54946993586 38.201 2 -1.319058056812865 0.38308319324682233 1.0 ['ENSG00000092295|ENST00000206765|TGM1'] 61679 20200 LLHSKAVTV True PC9_epitope_Rep1 966.58621599378 966.58510993586 82.529 2 -1.319065239531006 0.38308319324682233 1.0 ['ENST00000560597.1_1_15:65748048-65748153:-|nuORF', 'ENST00000395652.7_1_15:65746746-65748153:-|nuORF'] 136879 20551 YIYILITILKM True H1975_Epitope_Rep3 1382.8247320069797 1382.82362993586 85.899 2 -1.3190760777111954 0.38308319324682233 1.0 ['ENSG00000183303|ENST00000329434|OR5P2', 'ENSG00000182334|ENST00000641167|OR5P3'] 64465 15919 LQTLEIKKV True PC9_epitope_Rep1 1070.66994561774 1070.6688499358602 66.043 2 -1.3190963243242935 0.38308319324682233 1.0 ['nc|ENSG00000198054|Q96T75-4|DSCR8', 'ENST00000469658.5_1_21:39494425-39528428:+|nuORF'] 69387 10635 LVQIPIFFFTV True PC9_epitope_Rep4 1322.7638460025798 1322.76274993586 48.657 2 -1.3191255540598787 0.38308319324682233 1.0 ['ENSG00000172209|ENST00000304402|GPR22'] 21431 18721 ERPKELVRKP True NCI_RA007_Epitope_Rep3 1250.7459045226597 1250.74426490379 81.869 3 -1.319145236356008 0.38308319324682233 1.0 ['ENSG00000048162|ENST00000614830|NOP16', 'ENST00000510608.1_1_5:175813700-175815552:-|nuORF', 'nc|ENSG00000048162|Q9Y3C1-3|NOP16', 'nc|ENSG00000048162|Q9Y3C1-2|NOP16'] 117760 25509 VALKPLGGL True PC9_epitope_Rep2 866.5589386167799 866.55784993586 103.8 2 -1.3191532436032851 0.38308319324682233 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 78920 2699 PFDDFDCD True PC9_epitope_Rep5 972.31711323856 972.31656496793 14.885 1 -1.3191883576623387 0.38308319324682233 1.0 ['nc|ENSG00000167524|Q96LW2|RSKR', 'ENSG00000167524|ENST00000301037|RSKR'] 92660 24852 RRGALQHRIRV True H1975_Epitope_Rep2 1360.82761751436 1360.8265299358602 102.16 2 -1.3192001169388052 0.38308319324682233 1.0 ['ENSG00000176531|ENST00000292140|PHLDB3'] 120124 23344 VFKGQKLLKC True PC9_epitope_Rep5 1162.6896355165 1162.68852993586 94.775 2 -1.3192308148738967 0.38308319324682233 1.0 ['CON__ENSEMBL:ENSBTAP00000034412'] 36894 6075 GVQQLPLE True PC9_epitope_Rep1 882.4810822188998 882.47998993586 28.181 2 -1.3192398255664217 0.38308319324682233 1.0 ['PHGDH-HMGCS2|1|fusion', 'ENSG00000092621|ENST00000641023|PHGDH'] 68480 22918 LTVFWMDFV True PC9_epitope_Rep1 1156.56270366788 1156.5616099358601 92.952 2 -1.3192925929306847 0.38308319324682233 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 117759 25330 VALKPLGGL True PC9_epitope_Rep2 866.5589386167799 866.55784993586 103.11 2 -1.319297651883039 0.38308319324682233 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 39079 15025 HKYRRYQWFCL True NCI_RA007_Epitope_Rep2 1598.79287179842 1598.7917699358602 63.128 2 -1.3193078647849965 0.38308319324682233 1.0 ['ENST00000470889.5_1_3:138341046-138341142:+|nuORF'] 11071 4355 DDSVPRYHAV True PC9_epitope_Rep2 1157.54653600977 1157.54488490379 22.101 3 -1.3194951592261772 0.3831009420614093 1.0 ['nc|ENSG00000091409|P23229-5|ITGA6', 'nc|ENSG00000091409|P23229|ITGA6', 'nc|ENSG00000091409|P23229-3|ITGA6', 'ENST00000409532.5_2_2:173366626-173368977:+|nuORF'] 5988 12117 APLAPQCNE True NCI_RA007_Epitope_Rep2 941.42766674705 941.42711496793 51.727 1 -1.3196306095422041 0.3831009420614093 1.0 ['ENST00000602285.1_1_5:176560811-176562089:+|nuORF'] 45447 7269 ISEDPVPVKRH True H1975_Epitope_Rep1 1275.69353459663 1275.69187490379 32.97 3 -1.319658339383478 0.3831009420614093 1.0 ['VIP|p.G159Efs*10|2|0.33|ENSG00000146469|chr6:152757102-152757102|G/-|frameshift_variant', 'nc|ENSG00000146469|P01282-2|VIP', 'ENSG00000146469|ENST00000367244|VIP'] 102292 6688 SPVDYFWYR True PC9_epitope_Rep5 1231.56620882519 1231.5645749037901 30.698 3 -1.3196882607585945 0.3831009420614093 1.0 ['SLC6A19|p.P451Rfs*25|1|0.13|ENSG00000174358|chr5:1219076-1219076|C/-|frameshift_variant', 'ENSG00000174358|ENST00000304460|SLC6A19'] 135876 17429 YERWWYEKLIN True NCI_RA007_Epitope_Rep1 1598.7881632574597 1598.78706993586 71.929 2 -1.3197874053304135 0.3831382412692271 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 99424 23946 SLEGMCGT True PC9_epitope_Rep3 796.3095257603201 796.30842993586 97.394 2 -1.3198509427780138 0.3831382412692271 1.0 ['ENSG00000164080|ENST00000684192|RAD54L2', 'ENST00000487093.5_1_3:51624427-51671126:+|nuORF'] 109226 6863 TFTVQNREL True NCI_RA007_Epitope_Rep4 1106.5720224816198 1106.57092993586 33.018 2 -1.3198708966827337 0.3831382412692271 1.0 ['ENSG00000163655|ENST00000496455|GMPS', 'nc|ENSG00000163655|P49915-2|GMPS'] 16245 9902 EEGWTRLK True H1975_Epitope_Rep3 1017.5243440132099 1017.52324993586 43.119 2 -1.3198721730764735 0.3831382412692271 1.0 ['ENSG00000119922|ENST00000371826|IFIT2'] 5044 6297 ALLGFDVQ True PC9_epitope_Rep1 861.45961849833 861.45852993586 29.034 2 -1.3199001934023913 0.3831382412692271 1.0 ['ENST00000383742.7_2_3:46712476-46718839:-|nuORF', 'nc|ENSG00000178038|Q60I27-3|ALS2CL', 'nc|ENSG00000178038|Q60I27-2|ALS2CL', 'ENSG00000178038|ENST00000318962|ALS2CL', 'ENST00000486301.5_1_3:46718337-46718925:-|nuORF', 'ENST00000434140.5_2_3:46717393-46723043:-|nuORF'] 19523 16635 ELQQENKEL True PC9_epitope_Rep6 1129.5615173675699 1129.5604299358602 76.454 2 -1.3200256883267691 0.383181977580807 1.0 ['ENST00000395941.4_1_12:27107091-27110700:+|nuORF', 'nc|ENSG00000111790|Q9NVK5-3|FGFR1OP2', 'nc|ENSG00000111790|Q9NVK5-2|FGFR1OP2', 'ENSG00000111790|ENST00000229395|FGFR1OP2'] 125441 14546 VLTQLQSV True H1975_Epitope_Rep3 886.51238234718 886.51128993586 61.319 2 -1.320082674431295 0.3832015284529251 1.0 ['ENSG00000177045|ENST00000317578|SIX5', 'ENST00000560168.1_1_19:46268761-46269535:-|nuORF'] 33106 24457 GKKKPKLQNA True NCI_RA007_Epitope_Rep3 1110.6873270173799 1110.6862299358602 105.84 2 -1.3201212141748264 0.3832089868075793 1.0 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 41925 8016 IEANDLLQELP True H1975_Epitope_Rep1 1253.6503323719699 1253.6492299358601 35.777 2 -1.3202674536159096 0.38321644498186214 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'ENST00000509957.5_1_5:37142364-37158376:-|nuORF'] 70543 9324 LYTQRSLL True PC9_epitope_Rep5 992.5654805492 992.56438993586 40.818 2 -1.320330260816222 0.383235994727996 1.0 ['ENSG00000131459|ENST00000253778|GFPT2'] 111310 21075 TLHRAPAR True H1975_Epitope_Rep1 920.5304324531598 920.52932993586 87.539 2 -1.3203829471826178 0.38324345239534713 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A'] 52005 14291 KLEFHFWIYHF True H1975_Epitope_Rep3 1565.78195567821 1565.78084993586 60.314 2 -1.3204207880805467 0.3832472886868418 1.0 ['ENST00000421210.1_2_10:64135465-64135950:+|nuORF'] 41524 6205 IDARYEGLEVI True H1975_Epitope_Rep1 1276.6663167892798 1276.66520993586 28.936 2 -1.320471770280564 0.3832472886868418 1.0 ['ENSG00000181541|ENST00000317605|MAB21L2'] 39077 18477 HKWRMQRPL True NCI_RA007_Epitope_Rep3 1250.6818647974599 1250.68076993586 80.856 2 -1.3205473800642358 0.3832472886868418 1.0 ['ENST00000381348.4_2_22:42353689-42353893:+|nuORF', 'ENSG00000205704|ENST00000381348|SMIM45'] 81928 6296 PSPGLKQS True NCI_RA007_Epitope_Rep4 812.4392174069201 812.43812993586 30.822 2 -1.3206179383353291 0.3832472886868418 1.0 ['ENST00000468308.1_1_2:172378863-172407640:+|nuORF'] 97466 5740 SGIIMAHCSL True NCI_RA007_Epitope_Rep5 1030.49397248506 1030.4928699358602 28.766 2 -1.3206377580823312 0.3832472886868418 1.0 ['ENST00000606723.2_1_6:25998815-25999043:+|nuORF'] 78922 21644 PFEDALRVP True PC9_epitope_Rep2 1042.54474510462 1042.54364993586 88.728 2 -1.3206829784696918 0.3832472886868418 1.0 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1'] 45671 9061 ISKERRTWEE True H1975_Epitope_Rep1 1332.6786128084802 1332.6775099358601 39.762 2 -1.3206961891913267 0.3832472886868418 1.0 ['KLRC1|p.G134S|1|0.25|ENSG00000134545|chr12:10449326-10449326|C/T|missense_variant'] 63443 24436 LPGTRGFPKA True PC9_epitope_Rep5 1042.5923640033798 1042.59126993586 99.034 2 -1.3207076418460983 0.38325474549631244 1.0 ['ENST00000560221.1_1_15:99190394-99190574:-|nuORF'] 122120 21682 VGRGQRHR True PC9_epitope_Rep4 964.5427284723598 964.54217496793 91.6 1 -1.3207842325107884 0.38328739300739884 1.0 ['ENST00000483133.1_7:100608813-100609843:+|nuORF'] 121448 22780 VGIKGRRGDRR True PC9_epitope_Rep4 1268.7537838677597 1268.7526899358602 95.844 2 -1.3207855142400984 0.38328739300739884 1.0 ['ENST00000525051.5_1_8:144875319-144875475:-|nuORF'] 115272 10304 TVDLNRVLN True PC9_epitope_Rep4 1042.5771078620598 1042.5760099358602 47.321 2 -1.3207877703953776 0.38328739300739884 1.0 ['CON__Q9D646', 'CON__A2A5Y0', 'CON__REFSEQ:XP_986630', 'ENSG00000094796|ENST00000251645|KRT31', 'CON__Q9UE12', 'CON__Q15323'] 112352 22309 TMWAVLELGAE True NCI_RA007_Epitope_Rep5 1218.5954603481398 1218.59380490379 92.962 3 -1.3207913223673373 0.38328739300739884 1.0 ['nc|ENSG00000155463|Q15070-2|OXA1L', 'ENSG00000155463|ENST00000612549|OXA1L'] 110347 7008 TILATTAA True PC9_epitope_Rep1 760.43306939732 760.43196993586 31.762 2 -1.3207979904499525 0.38328739300739884 1.0 ['ENSG00000181291|ENST00000631683|TMEM132E'] 70679 8691 MDHYRTFH True NCI_RA007_Epitope_Rep5 1105.47634827497 1105.4752499358601 40.094 2 -1.3208554688046061 0.38328739300739884 1.0 ['ENST00000442885.2_1_11:65655295-65655958:-|nuORF', 'ENST00000528937.1_1_11:65654989-65655958:-|nuORF', 'ENST00000532679.5_1_11:65653270-65655931:-|nuORF', 'ENSG00000172500|ENST00000357519|FIBP', 'nc|ENSG00000172500|O43427|FIBP'] 140224 6584 YWLYLEEGVI True PC9_epitope_Rep2 1283.64379043955 1283.64214490379 30.739 3 -1.320888912651716 0.38329303675048354 1.0 ['ENSG00000075429|ENST00000533854|CACNG5'] 101152 16458 SLVPHSKVV True PC9_epitope_Rep1 964.57056592964 964.56946993586 68.131 2 -1.3209641560737626 0.38329303675048354 1.0 ['NXPH2|p.P163H|1|0.21|ENSG00000144227|chr2:138671229-138671229|G/T|missense_variant'] 54544 14088 LAANGLWNQKI True NCI_RA007_Epitope_Rep2 1226.6771562564998 1226.6760499358602 59.46 2 -1.3210004437086873 0.38329303675048354 1.0 ['NLRP12|p.D467N|1|0.22|ENSG00000142405|chr19:53810260-53810260|C/T|missense_variant'] 18712 11251 ELDGKREWREK True NCI_RA007_Epitope_Rep2 1444.7422756941999 1444.7411699358602 48.351 2 -1.3210209550165442 0.38329303675048354 1.0 ['ENST00000520239.1_1_8:70041855-70042335:+|nuORF'] 118937 11590 VEERRKREELH True H1975_Epitope_Rep1 1479.7906228689499 1479.7895299358602 49.569 2 -1.3210255073845498 0.3833004920153286 1.0 ['ZNF496|p.Q317H|1|0.28|ENSG00000162714|chr1:247308530-247308530|C/A|missense_variant'] 108040 16065 TDESEEDGEEK True NCI_RA007_Epitope_Rep5 1266.4735497784598 1266.47191490379 68.524 3 -1.32106494521 0.38330794709992505 1.0 ['nc|ENSG00000092853|Q9HAW4-2|CLSPN', 'nc|ENSG00000092853|Q9HAW4-3|CLSPN', 'ENSG00000092853|ENST00000318121|CLSPN'] 79972 20982 PITTLNRII True PC9_epitope_Rep2 1039.6389798426299 1039.6378899358601 86.158 2 -1.3210984747043633 0.38332749054072024 1.0 ['ENST00000438709.6_1_2:98206084-98206213:-|nuORF'] 43248 5322 IHDGDTVSV True PC9_epitope_Rep2 941.4454249861701 941.44432993586 25.86 2 -1.321178435015168 0.38335912189932786 1.0 ['nc|ENSG00000180764|A2A3N6|PIPSL', 'ENST00000480546.1_1_10:95718567-95721153:-|nuORF'] 130049 15469 VTPVWWEDVWL True H1975_Epitope_Rep1 1428.70778767844 1428.7066899358601 64.773 2 -1.321305940751702 0.38341492898156543 1.0 ['ENSG00000072657|ENST00000261180|TRHDE', 'TRHDE|p.W794Gfs*25|1|0.16|ENSG00000072657|chr12:72621148-72621148|T/-|frameshift_variant'] 39664 8930 HPSSSLALLS True PC9_epitope_Rep5 1010.5396597241801 1010.53856993586 39.294 2 -1.3213964213190612 0.3834298354829741 1.0 ['nc|ENSG00000162419|Q9Y692|GMEB1', 'ENSG00000162419|ENST00000373816|GMEB1'] 61335 10625 LLEEIWKVNFT True H1975_Epitope_Rep1 1390.7496524904195 1390.7485499358602 45.825 2 -1.3214431762574081 0.3834298354829741 1.0 ['ENSG00000179002|ENST00000375371|TAS1R2'] 63485 15307 LPHLVQERL True PC9_epitope_Rep2 1103.6451278522302 1103.64402993586 64.16 2 -1.3216015492045305 0.3834856396866841 1.0 ['ENST00000513693.1_1_5:7690761-7690995:+|nuORF'] 100774 18117 SLRQQLRER True NCI_RA007_Epitope_Rep3 1184.6738022115599 1184.67214490379 79.386 3 -1.321926335765263 0.3835609815061042 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 33001 10992 GIVKNPSP True PC9_epitope_Rep6 810.4599528514999 810.45884993586 53.171 2 -1.321965788896961 0.3835609815061042 1.0 ['ENSG00000173276|ENST00000310826|ZBTB21'] 3673 14668 AGRNVMVP True PC9_epitope_Rep1 842.4432572415399 842.44214993586 61.241 2 -1.3220220079492855 0.38359542141588 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant'] 117755 25082 VALKPLGGL True NCI_RA007_Epitope_Rep5 866.5589386167799 866.55784993586 103.98 2 -1.3220257910805513 0.38359542141588 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 25553 6915 FERPSSTAQ True PC9_epitope_Rep3 1021.48287312405 1021.48176993586 31.611 2 -1.3220403164011771 0.38359542141588 1.0 ['ENST00000299613.10_1_11:9596790-9596871:+|nuORF'] 112507 4190 TNVSILDLCYT True H1975_Epitope_Rep3 1240.6009396513998 1240.5998499358602 21.235 2 -1.322047667602779 0.3836028718543767 1.0 ['OR2B3|p.L66V|1|0.11|ENSG00000204703|chr6:29087053-29087053|G/C|missense_variant'] 59628 9798 LGSKKPPK True PC9_epitope_Rep4 853.5385375253699 853.53744993586 45.329 2 -1.3220594084611499 0.38360568555405145 1.0 ['SCN11A|p.Q1345P|1|0.33|ENSG00000168356|chr3:38863217-38863217|T/G|missense_variant'] 4235 20278 AIGALGSIKAI True PC9_epitope_Rep2 1012.62808080576 1012.62698993586 83.421 2 -1.3220836249991168 0.38360568555405145 1.0 ['ENSG00000137992|ENST00000370132|DBT'] 36349 18850 GVHFWLRLL True PC9_epitope_Rep5 1139.6603839935499 1139.65873490379 77.523 3 -1.322155217831996 0.3836187621614435 1.0 ['nc|ENSG00000163704|Q5FWE3-2|PRRT3', 'ENSG00000163704|ENST00000412055|PRRT3'] 117756 24894 VALKPLGGL True NCI_RA007_Epitope_Rep5 866.5589386167799 866.55784993586 103.25 2 -1.322178570854783 0.3836187621614435 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 64738 10273 LRRAPRLWKV True NCI_RA007_Epitope_Rep4 1293.81459321917 1293.8129549037901 46.368 3 -1.3222198913904564 0.3836187621614435 1.0 ['ENSG00000232070|ENST00000556585|TMEM253'] 128784 24965 VSRALGVK True H1975_Epitope_Rep1 828.5181364339599 828.51702993586 103.38 2 -1.3222463988157518 0.3836187621614435 1.0 ['ENST00000426923.2_1_4:84026116-84028983:-|nuORF', 'ENST00000509973.5_1_4:84026116-84035878:-|nuORF'] 120355 23529 VFQRQRIP True PC9_epitope_Rep6 1042.6035973934197 1042.60250993586 103.65 2 -1.3222720523365197 0.3836187621614435 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant'] 78127 5118 PAPDHRLE True PC9_epitope_Rep6 933.46682913709 933.4657299358599 27.371 2 -1.3223090211866722 0.3836336608534861 1.0 ['ENSG00000125845|ENST00000378827|BMP2'] 117753 23935 VALKPLGGL True NCI_RA007_Epitope_Rep4 866.5589386167799 866.55784993586 103.8 2 -1.3223103390119444 0.3836336608534861 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 68872 24701 LVEFTKKL True NCI_RA007_Epitope_Rep2 976.5957180483199 976.59462993586 103.83 2 -1.3223436052144724 0.3836364735029307 1.0 ['nc|ENSG00000012504|Q96RI1-5|NR1H4', 'nc|ENSG00000012504|Q96RI1-2|NR1H4', 'ENSG00000012504|ENST00000392986|NR1H4', 'nc|ENSG00000012504|Q96RI1-4|NR1H4', 'nc|ENSG00000012504|Q96RI1|NR1H4'] 69159 13130 LVLTHGADP True PC9_epitope_Rep2 921.4919812557699 921.49088993586 55.777 2 -1.3223565004760562 0.3836364735029307 1.0 ['ENSG00000154237|ENST00000388948|LRRK1', 'LRRK1|p.D828Afs*9|1|0.45|ENSG00000154237|chr15:101027336-101027354|GGACGTGGGCAGCACCATC/-|frameshift_variant', 'LRRK1|p.R1305Pfs*82|1|0.11|ENSG00000154237|chr15:101053277-101053278|-/C|frameshift_variant', 'nc|ENSG00000154237|Q38SD2-2|LRRK1'] 8386 5104 ATPFQMFSPAN True PC9_epitope_Rep5 1209.5488445088897 1209.54774993586 24.659 2 -1.3223858121276997 0.38365137104668445 1.0 ['ENST00000301785.5_1_11:62480620-62480758:-|nuORF'] 125762 19280 VNIETSHMI True PC9_epitope_Rep1 1042.51173072418 1042.5106299358602 78.963 2 -1.3224475206065738 0.38365137104668445 1.0 ['CA10|p.D79E|1|0.32|ENSG00000154975|chr17:51931032-51931032|G/T|missense_variant', 'ENSG00000154975|ENST00000451037|CA10'] 119627 19376 VESCDCHP True PC9_epitope_Rep3 888.31058838948 888.30948993586 79.753 2 -1.3225474990546697 0.38365798250277927 1.0 ['ENST00000439875.1_1_9:115871246-115871747:-|nuORF'] 55924 14150 LDGTELQLDLE True PC9_epitope_Rep5 1244.61361251008 1244.61250993586 59.439 2 -1.3226796643964058 0.38365798250277927 1.0 ['ENSG00000181284|ENST00000323206|TMEM102'] 30370 6158 GAEPARPQAV True PC9_epitope_Rep1 994.5195929859399 994.51848993586 28.501 2 -1.322706983367547 0.38365798250277927 1.0 ['nc|ENSG00000185024|Q92994-5|BRF1', 'ENSG00000185024|ENST00000547530|BRF1', 'ENST00000547374.5_1_14:105676890-105677657:-|nuORF', 'ENST00000546997.1_1_14:105676890-105678659:-|nuORF', 'nc|ENSG00000185024|Q92994-9|BRF1', 'nc|ENSG00000185024|Q92994-3|BRF1', 'nc|ENSG00000185024|Q92994-7|BRF1', 'nc|ENSG00000185024|Q92994-8|BRF1'] 58820 3476 LFQTPGTD True PC9_epitope_Rep5 877.4181476091699 877.41704993586 18.447 2 -1.322717073683979 0.38365798250277927 1.0 ['nc|ENSG00000148773|P46013-2|MKI67', 'ENSG00000148773|ENST00000368654|MKI67'] 13002 10812 DLQGRFEL True PC9_epitope_Rep6 976.4977949121999 976.49668993586 52.436 2 -1.3227270996170957 0.38365798250277927 1.0 ['ENSG00000255423|ENST00000533473|EBLN2'] 12601 13715 DLDTKDIKLP True H1975_Epitope_Rep1 1156.63395403184 1156.6328499358601 57.893 2 -1.3227366784395207 0.38365798250277927 1.0 ['ENST00000551506.1_1_12:46623410-46662443:-|nuORF', 'ENST00000549049.5_1_12:46633613-46662443:-|nuORF'] 140466 8163 YYHQKYRG True PC9_epitope_Rep6 1113.5355774032498 1113.5344899358602 40.945 2 -1.3227500426791077 0.38365798250277927 1.0 ['ENSG00000127951|ENST00000248598|FGL2'] 59840 22695 LHEKKNKRP True PC9_epitope_Rep1 1148.6778249628398 1148.67672993586 92.101 2 -1.3227508326294306 0.38365798250277927 1.0 ['nc|ENSG00000198001|Q9NWZ3-2|IRAK4', 'ENSG00000198001|ENST00000613694|IRAK4'] 57932 12515 LEQMIHIVF True PC9_epitope_Rep1 1128.6001518057599 1128.5985149037901 53.008 3 -1.3228402245824171 0.38365798250277927 1.0 ['ENST00000515261.1_1_4:186444434-186456588:-|nuORF'] 135818 12759 YEQEKYTLQRE True H1975_Epitope_Rep1 1485.7099725064097 1485.70886993586 54.139 2 -1.3228567737162953 0.38365995698716865 1.0 ['ENST00000510751.5_1_5:169015420-169022772:+|nuORF', 'ENSG00000040275|ENST00000265295|SPDL1', 'nc|ENSG00000040275|Q96EA4-2|SPDL1', 'nc|ENSG00000040275|Q96EA4-3|SPDL1'] 112526 15124 TPAERQLVF True PC9_epitope_Rep5 1059.5712942056298 1059.57018993586 63.18 2 -1.3229086940510866 0.38365995698716865 1.0 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 35331 5129 GSVPSIRRNFH True PC9_epitope_Rep5 1268.67380221156 1268.67214490379 24.752 3 -1.3229994419894082 0.38365995698716865 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 140438 8621 YYFKYLCKV True PC9_epitope_Rep4 1225.62055289717 1225.61944993586 40.643 2 -1.3230010978852615 0.38365995698716865 1.0 ['ENST00000424690.1_1_3:174952966-174953104:-|nuORF'] 135877 17246 YERWWYEKLIN True NCI_RA007_Epitope_Rep2 1598.7881632574597 1598.78706993586 71.819 2 -1.323080023904007 0.38365995698716865 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 56643 20923 LEAAEFLERRE True NCI_RA007_Epitope_Rep1 1361.69392851945 1361.6928299358601 85.626 2 -1.323088988622208 0.38365995698716865 1.0 ['ENST00000460667.5_1_10:111985902-112004616:+|nuORF', 'nc|ENSG00000119950|P50539|MXI1'] 29904 9396 FWDQWYLWYLR True NCI_RA007_Epitope_Rep2 1674.7983340183398 1674.79722993586 41.157 2 -1.3231043199438084 0.38365995698716865 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 130897 11723 VVHHRIHTG True PC9_epitope_Rep1 1054.57844527474 1054.57787496793 49.968 1 -1.3231488215928313 0.38365995698716865 1.0 ['ENSG00000256223|ENST00000248211|ZNF10'] 16593 4457 EERQDIERYSK True NCI_RA007_Epitope_Rep1 1451.7004704518697 1451.6993699358602 21.445 2 -1.323186856699372 0.38365995698716865 1.0 ['ENSG00000113356|ENST00000651687|POLR3G'] 114510 6893 TSGEHFNL True PC9_epitope_Rep5 903.40864555463 903.40754993586 31.483 2 -1.323192441043227 0.38365995698716865 1.0 ['ENSG00000076650|ENST00000170564|GPATCH1', 'ENST00000592165.1_1_19:33587130-33591098:+|nuORF'] 42934 7376 IFYQKARYQRK True NCI_RA007_Epitope_Rep4 1499.83611650939 1499.8350099358602 35.013 2 -1.3232679364272708 0.3836674036753779 1.0 ['nc|ENSG00000180745|Q8NCR9-2|CLRN3', 'ENSG00000180745|ENST00000368671|CLRN3'] 31973 9064 GESVQKPLDYY True PC9_epitope_Rep2 1297.6190322436898 1297.61792993586 40.21 2 -1.323437240656305 0.38367302557659083 1.0 ['nc|ENSG00000117308|Q14376-2|GALE', 'ENSG00000117308|ENST00000617979|GALE', 'ENST00000459934.5_1_1:24122658-24127224:-|nuORF'] 43945 16567 ILETLDALVDP True PC9_epitope_Rep6 1197.6492697428098 1197.64816993586 76.165 2 -1.3234442041637364 0.38367302557659083 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2', 'ENST00000483634.1_1_6:24408642-24418827:+|nuORF'] 85244 20501 QKLFIRHITTK True H1975_Epitope_Rep2 1383.83505388023 1383.83341490379 84.939 3 -1.3234940798381467 0.38367302557659083 1.0 ['nc|ENSG00000231924|P11464-3|PSG1', 'ENSG00000231924|ENST00000436291|PSG1', 'nc|ENSG00000231924|P11464-4|PSG1', 'nc|ENSG00000231924|P11464-2|PSG1'] 115052 12476 TTRKDIYTE True NCI_RA007_Epitope_Rep5 1125.56660274801 1125.56494490379 54.647 3 -1.3234955086458566 0.38367302557659083 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|7|1|sense'] 61243 12908 LLDQRDRIMRQ True NCI_RA007_Epitope_Rep2 1442.7776156571 1442.77650993586 54.83 2 -1.3235437231036236 0.3836758363234388 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'MCM3AP|p.E650Rfs*6|1|0.3|ENSG00000160294|chr21:46275236-46275236|C/-|frameshift_variant'] 91247 16878 RLSRWKRHREE True H1975_Epitope_Rep1 1551.8494751577498 1551.84836993586 70.332 2 -1.323545114505697 0.3836758363234388 1.0 ['ENST00000266581.4_1_12:47472787-47473288:-|nuORF'] 97458 20628 SGHFFFST True NCI_RA007_Epitope_Rep5 928.40791727864 928.40682993586 86.29 2 -1.323579088281155 0.38370744436658855 1.0 ['ENST00000368715.5_1_1:153516097-153516238:-|nuORF'] 36180 19239 GVFLPAGI True PC9_epitope_Rep5 772.4483255386399 772.44722993586 79.042 2 -1.323710120548096 0.38372697070371486 1.0 ['ENST00000555241.5_2_14:64663518-64663803:+|nuORF'] 12683 12966 DLETVVNHI True PC9_epitope_Rep1 1038.53457434374 1038.53346993586 54.745 2 -1.3237834314939625 0.383741860661778 1.0 ['nc|ENSG00000143994|Q96SE0-3|ABHD1', 'ENSG00000143994|ENST00000316470|ABHD1'] 81923 15656 PSNVSQDRKV True PC9_epitope_Rep1 1128.58873517492 1128.5876299358601 65.041 2 -1.3237920352206507 0.383741860661778 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 59276 12803 LGGSSPLAA True H1975_Epitope_Rep1 771.41266830591 771.41211496793 54.31 1 -1.3239591388373109 0.3837790824092194 1.0 ['nc|ENSG00000167377|P17027|ZNF23', 'ENSG00000167377|ENST00000647773|ZNF23'] 22931 12114 EVGRVQDFLG True PC9_epitope_Rep6 1118.5720224816198 1118.57092993586 57.939 2 -1.3240223932838568 0.3837790824092194 1.0 ['ENSG00000162040|ENST00000454677|HS3ST6'] 42874 13024 IFRRIKMP True NCI_RA007_Epitope_Rep5 1059.6375403739899 1059.6364499358601 56.774 2 -1.3240516111447251 0.3837790824092194 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2', 'ENST00000507209.5_1_4:187118658-187122526:+|nuORF'] 81597 17830 PRLTVSFSL True PC9_epitope_Rep2 1018.58113061334 1018.58002993586 73.88 2 -1.3240704808718253 0.3837790824092194 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.G2269Afs*6|1|0.24|ENSG00000158683|chr7:47827398-47827398|C/-|frameshift_variant'] 57617 9650 LELQRLYSEHS True H1975_Epitope_Rep1 1373.6939285194499 1373.6928299358601 42.047 2 -1.3240734227818323 0.3837790824092194 1.0 ['ENST00000369151.7_1_10:120445489-120445597:-|nuORF'] 105515 5312 SVDGSPVSP True H1975_Epitope_Rep2 843.39741216459 843.39686496793 25.484 1 -1.3241565123972001 0.38380604947816005 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.H598Tfs*38|1|0.13|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant', 'IRS1|p.Q1064Tfs*17|1|0.18|ENSG00000169047|chr2:226795553-226795554|-/C|frameshift_variant'] 139656 8549 YTSNDSYIV True PC9_epitope_Rep4 1060.47130538084 1060.47020993586 40.363 2 -1.324174069205066 0.38380604947816005 1.0 ['ENSG00000148513|ENST00000361713|ANKRD30A', 'ANKRD30A|p.S889Lfs*9|1|0.15|ENSG00000148513|chr10:37197430-37197430|C/-|frameshift_variant', 'ANKRD30A|p.P553Hfs*39|1|0.25|ENSG00000148513|chr10:37152070-37152070|C/-|frameshift_variant'] 139508 8215 YTITFLIR True NCI_RA007_Epitope_Rep5 1025.59096702105 1025.5898699358602 38.279 2 -1.324225034845982 0.3838134927825089 1.0 ['ENSG00000132182|ENST00000254508|NUP210'] 15908 8096 EDRFVRWTQA True H1975_Epitope_Rep1 1306.64183337694 1306.64072993586 36.086 2 -1.3242716523404177 0.38381629966057473 1.0 ['ENST00000323688.10_1_11:17298296-17304373:+|nuORF', 'ENST00000531172.5_2_11:17298296-17304356:+|nuORF'] 86316 7865 QQHLQHLEL True PC9_epitope_Rep6 1144.5989059358 1144.5978099358601 39.66 2 -1.3243105568517644 0.38381629966057473 1.0 ['nc|ENSG00000198400|P04629-4|NTRK1', 'nc|ENSG00000198400|P04629-3|NTRK1', 'nc|ENSG00000198400|P04629-2|NTRK1', 'ENSG00000198400|ENST00000524377|NTRK1', 'ENST00000530298.5_1_1:156807654-156845592:+|nuORF', 'ENST00000533630.1_1_1:156830726-156834592:+|nuORF'] 106931 6266 SYIYQKRWVRL True NCI_RA007_Epitope_Rep1 1510.84086753666 1510.8392249037902 28.404 3 -1.3244854346070931 0.3838841377977485 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1'] 120794 5723 VGDACDNC True NCI_RA007_Epitope_Rep1 795.25273916019 795.2521949679301 26.317 1 -1.324503369381714 0.3838915797992487 1.0 ['CON__ENSEMBL:ENSBTAP00000006074'] 120212 18528 VFLVSVPAAP True PC9_epitope_Rep3 998.5800679841798 998.57896993586 76.486 2 -1.3245589703065113 0.38389902162096873 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 58823 8117 LFQVNQWLTWL True H1975_Epitope_Rep1 1446.7659712608997 1446.7648699358601 36.166 2 -1.324636455069709 0.38390646326291505 1.0 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000525606.5_1_11:10819365-10820979:-|nuORF'] 38442 22188 HGVLICIQVL True NCI_RA007_Epitope_Rep5 1093.6317862872102 1093.6306899358601 92.489 2 -1.3247719882597404 0.3839213460075127 1.0 ['ENSG00000083457|ENST00000263087|ITGAE', 'ITGAE|p.H101Q|1|0.29|ENSG00000083457|chr17:3761927-3761927|G/T|missense_variant', 'ITGAE|p.P115Lfs*57|1|0.29|ENSG00000083457|chr17:3761494-3761494|C/-|frameshift_variant'] 119575 19674 VERKLAHRK True NCI_RA007_Epitope_Rep2 1135.6938093801498 1135.6927099358602 81.477 2 -1.3247813574649976 0.3839213460075127 1.0 ['nc|ENSG00000186583|Q76KD6-2|SPATC1', 'ENSG00000186583|ENST00000377470|SPATC1'] 73470 5080 NEVMALLRD True NCI_RA007_Epitope_Rep1 1059.5382798251899 1059.5371899358602 23.844 2 -1.3248381514505023 0.38394086528009275 1.0 ['ENSG00000167985|ENST00000301761|SDHAF2', 'ENST00000542074.1_1_11:61197581-61213540:+|nuORF'] 115183 7950 TVAQSNLRWKF True NCI_RA007_Epitope_Rep5 1348.7251690780797 1348.7240699358601 37.269 2 -1.3248835899843878 0.38394830605712904 1.0 ['ENST00000359015.4_1_6:136878860-136878899:-|nuORF'] 110666 16168 TIWFQNRRVKD True H1975_Epitope_Rep1 1461.78408093653 1461.78298993586 67.536 2 -1.3249086149801146 0.3839678245325861 1.0 ['ENSG00000128714|ENST00000392539|HOXD13'] 86886 18678 QRRQQVFRR True NCI_RA007_Epitope_Rep3 1272.7275691199197 1272.72592490379 81.704 3 -1.3249255739806423 0.3839706273098384 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 73673 24216 NGNGHEHC True PC9_epitope_Rep2 866.3089485967 866.30784993586 98.686 2 -1.3249271847595803 0.3839706273098384 1.0 ['NMT1-NME1|1|fusion', 'ENST00000588975.1_1_17:43138679-43163876:+|nuORF', 'NMT1|p.L84Ffs*50|1|0.27|ENSG00000136448|chr17:45086515-45086516|-/TT|frameshift_variant', 'ENST00000590114.5_1_17:43138721-43173651:+|nuORF', 'ENSG00000136448|ENST00000258960|NMT1'] 79470 14793 PGPPVLSSNP True PC9_epitope_Rep1 963.50254593947 963.50144993586 61.721 2 -1.325000373863869 0.3839929469450852 1.0 ['NUP155|p.D1007N|1|0.22|ENSG00000113569|chr5:37305095-37305095|C/T|missense_variant'] 45810 13727 ISPFMNKFF True PC9_epitope_Rep2 1129.5630380210498 1129.5619499358602 58.09 2 -1.3250064090243707 0.3839929469450852 1.0 ['nc|ENSG00000101294|Q8TCT9|HM13', 'nc|ENSG00000101294|Q8TCT9-4|HM13', 'ENSG00000101294|ENST00000398174|HM13', 'ENST00000492709.5_1_20:30126008-30136787:+|nuORF', 'nc|ENSG00000101294|Q8TCT9-5|HM13'] 45911 6164 ISRNMLMVFLR True NCI_RA007_Epitope_Rep5 1378.7577321596598 1378.75609490379 30.388 3 -1.3250227084423194 0.3839929469450852 1.0 ['ENST00000503946.1_1_5:134131747-134131804:+|nuORF'] 107856 17934 TARRGLSHR True NCI_RA007_Epitope_Rep4 1052.59515796804 1052.59406993586 77.603 2 -1.3250611708116666 0.38399574894629424 1.0 ['ENST00000264956.10_2_4:5813382-5814396:+|nuORF', 'ENST00000264956.10_2_4:5813500-5814718:+|nuORF'] 68323 22603 LTRWREALHFP True PC9_epitope_Rep5 1424.7677025963999 1424.76660993586 91.941 2 -1.325093520811192 0.38399574894629424 1.0 ['ENST00000549651.1_1_12:70636851-70637091:-|nuORF'] 15184 6693 EAFGTEVLP True NCI_RA007_Epitope_Rep2 961.4756624852898 961.47456993586 30.647 2 -1.325177676633397 0.3840468570738482 1.0 ['ENST00000248484.8_1_13:24144913-24164301:+|nuORF', 'ENST00000403372.6_2_13:24144913-24190045:+|nuORF'] 120694 23373 VGAQLRDIPPR True PC9_epitope_Rep3 1220.6989543302398 1220.6978499358602 95.184 2 -1.3251912385590376 0.3840468570738482 1.0 ['ENST00000526038.1_1_9:100136781-100138195:+|nuORF'] 118233 14292 VAYQIKRL True PC9_epitope_Rep6 989.6022004110898 989.60110993586 66.869 2 -1.3252252370030084 0.3840542955824457 1.0 ['ENSG00000109323|ENST00000647097|MANBA'] 42255 11662 IEHPLFPSPA True H1975_Epitope_Rep3 1106.5760452329 1106.57494993586 49.993 2 -1.3252981418597034 0.38405805851738256 1.0 ['L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|195|1|anti-sense'] 85851 19528 QNEDLRENML True PC9_epitope_Rep1 1260.57685016188 1260.5757499358601 79.936 2 -1.325306445686016 0.38405805851738256 1.0 ['nc|ENSG00000085382|Q8IYU2-4|HACE1', 'ENSG00000085382|ENST00000262903|HACE1'] 48704 15503 KEMMKETFKYF True H1975_Epitope_Rep3 1480.7094445545602 1480.70834993586 65.048 2 -1.3253517110757433 0.38405805851738256 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 60812 21417 LKKIRELDGHI True PC9_epitope_Rep1 1320.78776933464 1320.78613490379 87.217 3 -1.3253977166920385 0.38405805851738256 1.0 ['MYH11|p.E1117D|1|0.37|ENSG00000133392|chr16:15735521-15735521|C/G|missense_variant'] 22782 8681 EVDENDRREK True NCI_RA007_Epitope_Rep1 1288.6007564105996 1288.59964993586 37.769 2 -1.325426048046059 0.38405805851738256 1.0 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B'] 127884 17214 VRPGDRVAL True NCI_RA007_Epitope_Rep5 981.5719629119699 981.57086993586 72.985 2 -1.3254396001676854 0.38405805851738256 1.0 ['ENSG00000151240|ENST00000280886|DIP2C'] 63454 18590 LPGVGNII True PC9_epitope_Rep6 781.46978925921 781.46868993586 84.148 2 -1.3254573572007229 0.38405805851738256 1.0 ['NEIL3|p.R295Kfs*4|1|0.36|ENSG00000109674|chr4:177351392-177351394|TAG/AA|frameshift_variant', 'ENSG00000109674|ENST00000264596|NEIL3', 'ENST00000513321.1_1_4:178231246-178274506:+|nuORF'] 54861 9348 LAGFRGVP True NCI_RA007_Epitope_Rep1 815.4653725851098 815.46426993586 40.355 2 -1.3255795451685064 0.3840654961721448 1.0 ['ENST00000379888.8_1_10:6131069-6139013:+|nuORF'] 100125 16585 SLLDEESRF True PC9_epitope_Rep2 1094.52440358286 1094.5233099358602 69.031 2 -1.3255953708760944 0.3840729336472861 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'MYO7B|p.S1119*|1|0.51|ENSG00000169994|chr2:127620375-127620376|CG/-|frameshift_variant', 'MYO7B|p.K900Rfs*26|1|0.3|ENSG00000169994|chr2:127608762-127608762|A/-|frameshift_variant', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B', 'ENSG00000095777|ENST00000642920|MYO3A', 'MYO3A|p.R1013Pfs*5|1|0.15|ENSG00000095777|chr10:26166100-26166101|-/C|frameshift_variant'] 95354 8428 SAGYMEPY True PC9_epitope_Rep1 916.36366950816 916.36256993586 37.254 2 -1.3256710517292731 0.38410731966480716 1.0 ['ENSG00000107338|ENST00000377707|SHB', 'nc|ENSG00000107338|Q15464-2|SHB'] 58852 12194 LFRWDPGAL True PC9_epitope_Rep1 1073.5658149023698 1073.56470993586 51.762 2 -1.3257249964431241 0.38410731966480716 1.0 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 97457 15454 SGHFFFST True NCI_RA007_Epitope_Rep5 928.40791727864 928.40682993586 66.142 2 -1.325778757831363 0.38410731966480716 1.0 ['ENST00000368715.5_1_1:153516097-153516238:-|nuORF'] 122375 13315 VGSFASTL True PC9_epitope_Rep5 780.40176926904 780.40066993586 56.228 2 -1.3258089836079514 0.3841147562757338 1.0 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 103200 4650 SQQPIYSKQ True NCI_RA007_Epitope_Rep2 1077.5454733806098 1077.54436993586 22.713 2 -1.3258218291761714 0.3841342670852451 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10', 'ENST00000469521.5_1_21:45509650-45516542:+|nuORF', 'ENST00000483973.5_1_21:45509395-45516542:+|nuORF', 'TRAPPC10|p.V1007L|1|0.13|ENSG00000160218|chr21:44094084-44094084|G/T|missense_variant'] 61933 22869 LLLLTEQWKWL True PC9_epitope_Rep1 1441.83332254473 1441.8322299358601 92.758 2 -1.3258721740959731 0.3841537774236003 1.0 ['ENSG00000120451|ENST00000265909|SNX19', 'ENST00000527451.1_1_11:130773148-130776010:-|nuORF', 'ENST00000526579.5_1_11:130748389-130775881:-|nuORF', 'ENST00000580193.1_1_18:14630000-14630792:-|nuORF', 'ENST00000444901.1_1_21:14899938-14900730:+|nuORF'] 5663 8646 APALELEPA True PC9_epitope_Rep3 909.4807478657299 909.47964993586 38.207 2 -1.325939228678298 0.3841612132042211 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS', 'nc|ENSG00000160271|Q12967-3|RALGDS', 'nc|ENSG00000160271|Q12967-4|RALGDS', 'nc|ENSG00000160271|Q12967-6|RALGDS', 'ENSG00000160271|ENST00000372050|RALGDS', 'nc|ENSG00000160271|Q12967-2|RALGDS'] 128532 18856 VSGRWARV True PC9_epitope_Rep4 929.5195334162898 929.51842993586 80.616 2 -1.325983588867566 0.38417703944270726 1.0 ['ENST00000546983.1_1_14:36989418-36989796:-|nuORF'] 74788 11672 NLNLKEWL True PC9_epitope_Rep4 1028.5654805492 1028.5643899358602 52.659 2 -1.3259922212521573 0.38417703944270726 1.0 ['ENST00000509144.2_1_8:106809432-107072670:-|nuORF', 'ENST00000520594.5_1_8:106799777-107072670:-|nuORF', 'ENST00000520078.5_1_8:106810397-107072670:-|nuORF'] 32312 21322 GFVHRIPP True PC9_epitope_Rep3 921.5184707871299 921.51736993586 87.309 2 -1.3259951520328592 0.38417703944270726 1.0 ['LGALS13|p.V121L|1|0.35|ENSG00000105198|chr19:39607280-39607280|G/C|missense_variant', 'ENSG00000105198|ENST00000221797|LGALS13'] 102021 22055 SPPHLPPG True H1975_Epitope_Rep1 800.41808803952 800.41698993586 91.742 2 -1.3260359476310282 0.38417703944270726 1.0 ['SVA_F_dup805|chr16:56739964-56741004:-|1.3784163950761863|0.1539008476170439|3.16|494.0|36|2|anti-sense'] 77874 4670 PAGQKALEA True PC9_epitope_Rep5 883.4763311916298 883.4752299358599 23.017 2 -1.3260641384255067 0.38417703944270726 1.0 ['ENSG00000187189|ENST00000420283|TSPYL4'] 104418 8410 SSILCALIV True NCI_RA007_Epitope_Rep4 917.5255898831699 917.52448993586 39.163 2 -1.32606684907109 0.38417703944270726 1.0 ['ENSG00000204019|ENST00000371894|CT83'] 85697 24862 QLRQLRMWKMQ True H1975_Epitope_Rep2 1516.8118929908399 1516.8107899358602 102.2 2 -1.3260706345574007 0.38417703944270726 1.0 ['nc|ENSG00000173867|Q7L5Y6-2|DET1', 'ENSG00000140543|ENST00000268148|DET1', 'ENST00000557837.1_1_15:89060105-89074648:-|nuORF'] 116620 5839 TYHFWAPT True PC9_epitope_Rep1 1021.4657665079299 1021.46466993586 27.274 2 -1.3261150524183916 0.3841798360517198 1.0 ['ENST00000510957.1_1_22:31049909-31050715:-|nuORF'] 66300 9369 LSQKMSPFKRQ True H1975_Epitope_Rep3 1348.7285402063599 1348.72744993586 41.04 2 -1.326177061362018 0.3841798360517198 1.0 ['nc|ENSG00000133961|P49757-4|NUMB', 'nc|ENSG00000133961|P49757-2|NUMB', 'nc|ENSG00000133961|P49757-3|NUMB', 'ENSG00000133961|ENST00000555238|NUMB', 'nc|ENSG00000133961|P49757-9|NUMB', 'ENST00000557486.1_1_14:73748983-73753845:-|nuORF', 'ENST00000553997.5_1_14:73748216-73753941:-|nuORF'] 10746 6860 CWWRYWWHYPI True NCI_RA007_Epitope_Rep1 1694.76050904098 1694.75887490379 30.688 3 -1.326212987185572 0.3841872706200502 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 22894 5675 EVEYYYQRALE True H1975_Epitope_Rep1 1461.6776097489699 1461.6765099358602 26.896 2 -1.3262228072218634 0.38419006688074947 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 14527 10443 DVAERVDL True PC9_epitope_Rep1 915.4661604307499 915.46506993586 45.056 2 -1.326225736330033 0.38419006688074947 1.0 ['ENSG00000171241|ENST00000303383|SHCBP1'] 3643 12096 AGQCQPLHPP True PC9_epitope_Rep1 1046.4967493663798 1046.49564993586 51.387 2 -1.326302085264497 0.3841975010563168 1.0 ['ENST00000572218.5_2_17:44109587-44110490:-|nuORF'] 134689 11366 WWQQQWQQQWR True NCI_RA007_Epitope_Rep1 1686.7803925384198 1686.77928993586 48.184 2 -1.3264074653822555 0.38421700709836304 1.0 ['ENST00000253055.7_1_19:40718724-40719087:+|nuORF'] 85105 17840 QIRQWQRYREM True NCI_RA007_Epitope_Rep2 1592.79941373084 1592.79830993586 74.134 2 -1.326560904761373 0.38424210234062844 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 32691 11648 GHRPRHHPK True NCI_RA007_Epitope_Rep3 1120.61147673852 1120.61036993586 52.937 2 -1.3265687830847048 0.38424210234062844 1.0 ['ENST00000563392.5_1_16:70367501-70367651:+|nuORF', 'ENST00000443119.7_3_16:70405905-70406055:+|nuORF'] 16579 19939 EERDGKDRE True PC9_epitope_Rep4 1132.5108787770398 1132.50978993586 84.831 2 -1.326572566765877 0.38424210234062844 1.0 ['ENSG00000197329|ENST00000358912|PELI1'] 390 16540 AALEHGTA True PC9_epitope_Rep3 768.37661715036 768.37552993586 68.76 2 -1.3266198520116301 0.38424210234062844 1.0 ['ENST00000263116.6_1_22:23504435-23504693:+|nuORF'] 117205 8723 TYTFSLEGSG True PC9_epitope_Rep4 1060.47130538084 1060.47020993586 41.051 2 -1.3266588065518783 0.38424210234062844 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2', 'ENSG00000132669|ENST00000255006|RIN2'] 118874 8249 VEELYSHMD True PC9_epitope_Rep3 1121.46992548185 1121.4688299358602 36.706 2 -1.3267603507744512 0.3842736776031482 1.0 ['ZNF521|p.L1033Wfs*49|1|0.18|ENSG00000198795|chr18:25224820-25224820|A/-|frameshift_variant', 'ENSG00000198795|ENST00000361524|ZNF521'] 15850 10059 EDLNFDTKNVP True H1975_Epitope_Rep3 1290.60919583598 1290.60808993586 43.73 2 -1.3267818182470914 0.3842811100515433 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26', 'ENST00000466890.1_1_10:27366152-27369594:-|nuORF'] 18956 7022 ELFIQQER True NCI_RA007_Epitope_Rep5 1061.5505587610498 1061.54946993586 33.689 2 -1.3268901145431369 0.38432011587905124 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP', 'ENST00000473914.1_1_5:96332105-96341995:+|nuORF'] 128633 4035 VSLGGPAR True NCI_RA007_Epitope_Rep4 755.4289870763901 755.42788993586 21.779 2 -1.3269284911296184 0.38432011587905124 1.0 ['ENST00000375190.8_1_19:3606541-3606769:-|nuORF'] 119698 11531 VETDQRKM-[Oxidation] True H1975_Epitope_Rep1 1021.4862446327699 1021.48514993586 49.337 2 -1.3269424059247945 0.3843229084939708 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 120573 7258 VGAEPGLR True NCI_RA007_Epitope_Rep5 797.43955176009 797.43900496793 34.594 1 -1.3270950933512722 0.3843229084939708 1.0 ['ENST00000439785.5_1_19:35417953-35418121:+|nuORF', 'ENST00000303586.11_1_19:35417953-35420791:+|nuORF', 'ENST00000481564.1_1_7:23338971-23340720:+|nuORF', 'ENSG00000156928|ENST00000466681|MALSU1'] 66381 11778 LSRCLNTFDL True PC9_epitope_Rep3 1180.59104367404 1180.58938490379 50.322 3 -1.327148302779817 0.3843303398995751 1.0 ['ENSG00000139514|ENST00000380752|SLC7A1'] 110540 18617 TIRHRNTR True NCI_RA007_Epitope_Rep2 1052.59515796804 1052.59457496793 77.214 1 -1.327286092515738 0.3843981218843921 1.0 ['Tigger1_dup5122|chr6:109273837-109275304:-|1.212453697301262|0.115689182433559|3.39|478.0|46|1|anti-sense'] 23202 14118 EVQDEFLEKL True H1975_Epitope_Rep2 1248.6237832709596 1248.62268993586 59.459 2 -1.3273431067113814 0.3844417622208811 1.0 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 16792 15687 EFICPITREL True PC9_epitope_Rep1 1219.6270948295899 1219.6254449037901 65.162 3 -1.3273867285117202 0.38444919192284943 1.0 ['nc|ENSG00000196151|Q8N9V3-2|WDSUB1', 'ENSG00000196151|ENST00000359774|WDSUB1'] 112439 23502 TNLRQLTKTSR True PC9_epitope_Rep2 1316.75244645508 1316.7508049037901 95.875 3 -1.327515824715474 0.38445662144546905 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 48115 26717 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 110.14 3 -1.327528914814327 0.3844594105293649 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 56219 10510 LDPNYVLSSR True PC9_epitope_Rep1 1162.59823722946 1162.5971499358602 45.316 2 -1.327576262273448 0.3844594105293649 1.0 ['ENSG00000166165|ENST00000348956|CKB', 'ENSG00000104879|ENST00000221476|CKM'] 19424 23728 ELPKRRRQRG True PC9_epitope_Rep1 1294.7694339318998 1294.76832993586 96.065 2 -1.3276843761416988 0.3844668396596464 1.0 ['nc|ENSG00000288701|Q5JSZ5|PRRC2B'] 111764 20397 TLQLYNSVK True PC9_epitope_Rep5 1064.5866099165999 1064.58550993586 83.494 2 -1.3277520214272878 0.38446962839591103 1.0 ['nc|ENSG00000096996|P42701-2|IL12RB1', 'ENSG00000096996|ENST00000593993|IL12RB1', 'nc|ENSG00000096996|P42701-3|IL12RB1', 'IL12RB1|p.P391Rfs*64|1|0.93|ENSG00000096996|chr19:18069563-18069563|G/-|frameshift_variant'] 51894 1037 KKRQKKRKA True PC9_epitope_Rep5 1169.7832930908899 1169.78164490379 5.762 3 -1.327766752051562 0.38446962839591103 1.0 ['nc|ENSG00000107562|P48061-3|CXCL12'] 94427 4850 RYFFDEWMFGK True H1975_Epitope_Rep3 1524.6860066880397 1524.68490993586 23.781 2 -1.3278296880329201 0.38449934227199767 1.0 ['ENSG00000135577|ENST00000258042|NMBR', 'NMBR|p.K256Nfs*45|1|0.29|ENSG00000135577|chr6:142078558-142078558|T/-|frameshift_variant'] 81973 23333 PSRQESSC True NCI_RA007_Epitope_Rep3 892.37088014692 892.36978993586 101.33 2 -1.3279405683255712 0.38449934227199767 1.0 ['ENSG00000102901|ENST00000562787|CENPT', 'ENST00000436104.6_1_16:67865250-67867798:-|nuORF', 'nc|ENSG00000102901|Q96BT3-2|CENPT', 'ENST00000565157.5_1_16:67864257-67867798:-|nuORF', 'ENST00000569862.5_1_16:67865068-67866179:-|nuORF', 'ENST00000562947.5_1_16:67864542-67866179:-|nuORF', 'ENST00000564128.1_1_16:67865591-67866126:-|nuORF'] 128807 11410 VSRQHKEFLR True NCI_RA007_Epitope_Rep4 1298.72075240398 1298.7196499358602 50.804 2 -1.3279474277286079 0.38449934227199767 1.0 ['nc|ENSG00000101958|P23416-3|GLRA2', 'nc|ENSG00000101958|P23416-2|GLRA2', 'ENSG00000101958|ENST00000218075|GLRA2'] 16235 5645 EEGISDLF True PC9_epitope_Rep2 908.4127278755599 908.41162993586 27.097 2 -1.3279769190010313 0.38449934227199767 1.0 ['CDKAL1-E2F3|1|fusion', 'nc|ENSG00000112242|O00716-2|E2F3', 'ENSG00000112242|ENST00000346618|E2F3'] 15526 11030 EARRAFREEF True H1975_Epitope_Rep3 1309.6527324138099 1309.65162993586 47.517 2 -1.3280844712114495 0.3845021300218433 1.0 ['ENSG00000108479|ENST00000588479|GALK1', 'ENST00000589030.1_1_17:73759945-73761208:-|nuORF', 'ENST00000592494.1_1_17:73759392-73761232:-|nuORF'] 23053 11230 EVKVKCVL True NCI_RA007_Epitope_Rep3 916.5415743004799 916.54046993586 51.282 2 -1.3280869664808455 0.3845021300218433 1.0 ['ENST00000397766.3_1_15:34394281-34394365:+|nuORF'] 38748 10152 HHVHLVWP True PC9_epitope_Rep3 1023.54026886087 1023.5391699358601 44.004 2 -1.3281831572954328 0.3845058525401231 1.0 ['ENST00000533515.5_1_11:57263521-57267149:-|nuORF', 'ENST00000278426.7_2_11:57263521-57268513:-|nuORF'] 87772 5443 QVGRVEFRNY True H1975_Epitope_Rep3 1266.6469187573798 1266.64582993586 25.995 2 -1.3281886394407607 0.3845058525401231 1.0 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 68458 17832 LTTVSKTGL True PC9_epitope_Rep1 918.5385970950199 918.53750993586 73.385 2 -1.328209847597057 0.3845058525401231 1.0 ['DYRK2|p.G115S|1|0.77|ENSG00000127334|chr12:67657250-67657250|G/A|missense_variant'] 38915 22031 HILKIMWKWI True NCI_RA007_Epitope_Rep2 1366.79476929138 1366.79311490379 91.387 3 -1.3282361668958198 0.3845058525401231 1.0 ['ENSG00000016490|ENST00000394711|CLCA1'] 13170 12753 DLSYFLPSA True H1975_Epitope_Rep2 1011.4913125494298 1011.49020993586 54.157 2 -1.3282621303899642 0.3845058525401231 1.0 ['chr2:222572022-222586338|111|10.41|0.25|5.35|-|0|TE_info:L1PA5,L1PA5_dup1583,L1,LINE,donor,+,222586338,222590526|FARSB,None|48', 'chr11:102374933-102377496|150|10.29|0.03|8.55|+|2|TE_info:L1PA2,L1PA2_dup3799,L1,LINE,donor,-,102369167,102374933|None,BIRC2|29', 'chr1:59653519-59660219|387|26.66|0.05|9.04|+|1|TE_info:L1PA2,L1PA2_dup41,L1,LINE,donor,-,59647748,59653519|None,FGGY|69'] 56197 8594 LDPGEEGDK True NCI_RA007_Epitope_Rep1 958.4243551884199 958.42324993586 37.431 2 -1.3282774836621658 0.3845058525401231 1.0 ['ENST00000531174.1_1_11:64813863-64815169:-|nuORF'] 26222 1951 FHWKMNLCVI True NCI_RA007_Epitope_Rep2 1289.64130542509 1289.6396549037902 10.634 3 -1.3283003046445518 0.3845058525401231 1.0 ['nc|ENSG00000188092|B7ZAQ6-4|GPR89A', 'ENST00000532574.5_1_1:145811866-145826998:-|nuORF', 'ENST00000478307.5_1_1:147400580-147440603:+|nuORF', 'nc|ENSG00000188092|B7ZAQ6-3|GPR89A', 'ENSG00000188092|ENST00000314163|GPR89B', 'ENSG00000117262|ENST00000313835|GPR89A'] 79233 14194 PGGGGSPC True NCI_RA007_Epitope_Rep4 630.24316045266 630.2426149679301 61.878 1 -1.32837141661026 0.3845494805179134 1.0 ['ENSG00000165506|ENST00000298292|DNAAF2', 'nc|ENSG00000165506|Q9NVR5-2|DNAAF2'] 91279 13642 RLWWYHWICWL True H1975_Epitope_Rep1 1660.81254461384 1660.81144993586 57.606 2 -1.328411838377091 0.38455690703735884 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 67609 2738 LTEVGTMNIFV True H1975_Epitope_Rep2 1222.62676047642 1222.62566993586 14.587 2 -1.3284489933179988 0.3845884666899955 1.0 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 19908 10955 ELWTYVRWYTQ True PC9_epitope_Rep1 1543.74596409231 1543.74430490379 47.026 3 -1.3284820599040066 0.3846033182503771 1.0 ['ENST00000482889.1_1_1:109472820-109486481:-|nuORF', 'nc|ENSG00000121940|Q96S66-2|CLCC1', 'ENSG00000121940|ENST00000369969|CLCC1'] 84466 4623 QGLPSDQAT True PC9_epitope_Rep3 915.42977492203 915.42866993586 22.877 2 -1.3284981240359486 0.3846033182503771 1.0 ['ENST00000598240.1_1_19:19105804-19136912:-|nuORF'] 36613 19455 GVLLAKMKHP True H1975_Epitope_Rep2 1092.6477707045199 1092.64666993586 80.739 2 -1.3285285432140348 0.38463487620058884 1.0 ['NEK3|p.A51G|2|0.26|ENSG00000136098|chr13:52154139-52154139|G/C|missense_variant'] 16072 6194 EEDDRGEDGPK True NCI_RA007_Epitope_Rep1 1245.51093834669 1245.50984993586 28.129 2 -1.3285754108016512 0.384642301241599 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A'] 79128 3906 PGAHHFMSEYL True NCI_RA007_Epitope_Rep2 1287.57064258263 1287.56954993586 19.828 2 -1.3286469426976846 0.384661792031661 1.0 ['ENSG00000105085|ENST00000263390|MED26'] 34246 17570 GPKKTKRE True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 74.368 2 -1.328682537743909 0.3846692165687327 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 111866 15719 TLRLLESPTP True PC9_epitope_Rep4 1125.63937376545 1125.63772490379 68.388 3 -1.3287234872550482 0.38467664092664094 1.0 ['nc|ENSG00000167118|Q9BTM9-2|URM1'] 320 22967 AAIEKLREDL True H1975_Epitope_Rep3 1156.6451874218799 1156.6440899358602 95.947 2 -1.328848353497615 0.38470819608836765 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT', 'ENST00000466474.5_1_21:47766077-47773062:+|nuORF', 'PCNT|p.D659Gfs*18|1|0.23|ENSG00000160299|chr21:46357008-46357009|-/G|frameshift_variant', 'PCNT|p.G1782Afs*21|1|0.22|ENSG00000160299|chr21:46411414-46411414|G/-|frameshift_variant'] 100795 14135 SLRRTQRKR True NCI_RA007_Epitope_Rep4 1199.7323201471897 1199.73122993586 61.649 2 -1.328976294698579 0.3847425317310941 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'ENST00000473691.1_1_X:79938122-79975072:-|nuORF'] 114072 22651 TRPRGVGL True PC9_epitope_Rep2 854.5086343794198 854.50752993586 92.624 2 -1.32898438842966 0.3847425317310941 1.0 ['ENST00000416281.6_1_11:67048455-67049666:+|nuORF'] 34415 22984 GPWLPKTD True H1975_Epitope_Rep2 912.4705175352 912.46942993586 94.856 2 -1.3290088321898257 0.3847425317310941 1.0 ['ENST00000578509.1_1_17:80274764-80275310:-|nuORF'] 100027 11723 SLKEPEPLRSP True H1975_Epitope_Rep1 1251.6823012065897 1251.6812099358601 50.084 2 -1.3290658704896472 0.38474531283932145 1.0 ['ENST00000443361.1_1_9:108285096-108287232:+|nuORF'] 41726 9006 IDNLDTRLPRI True PC9_epitope_Rep4 1324.74629844548 1324.7452099358602 42.205 2 -1.3290880751192415 0.38474531283932145 1.0 ['ENSG00000152455|ENST00000354919|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-2|SUV39H2', 'nc|ENSG00000152455|Q9H5I1-3|SUV39H2'] 11302 23990 DETIMKSRNN True H1975_Epitope_Rep3 1206.56628547818 1206.56464490379 99.986 3 -1.3293115376013314 0.38482048064858604 1.0 ['nc|ENSG00000293458|O60774|FMO6P'] 131386 8983 VVSRGERWR True NCI_RA007_Epitope_Rep2 1143.62612374315 1143.62502993586 39.552 2 -1.329317172094358 0.38482048064858604 1.0 ['ENST00000376687.3_1_X:48555050-48555188:+|nuORF'] 33438 8387 GLGIEYTFPP True H1975_Epitope_Rep3 1092.54916177872 1092.5480699358602 37.244 2 -1.3293356852208376 0.3848232597418265 1.0 ['ENSG00000116898|ENST00000373116|MRPS15', 'ENST00000477040.1_1_1:36921391-36921985:-|nuORF', 'ENST00000488606.5_1_1:36921391-36923601:-|nuORF'] 12620 19778 DLEDKKLIN True PC9_epitope_Rep4 1086.5920892198599 1086.59098993586 84.201 2 -1.329339093393483 0.3848232597418265 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENSG00000134987|ENST00000513710|WDR36'] 3300 13614 AGGKGRHS True PC9_epitope_Rep1 768.3990839304399 768.39798993586 57.222 2 -1.3293988026207821 0.38484274529201 1.0 ['ENST00000488316.1_1_20:62290002-62290707:+|nuORF'] 78726 20190 PEEWSYLDPAQ True PC9_epitope_Rep1 1333.58264673497 1333.58101490379 82.49 3 -1.3294253794527697 0.3848455237474817 1.0 ['ENST00000421406.1_1_1:247353282-247372753:-|nuORF'] 64408 17363 LQRLHVTH True H1975_Epitope_Rep3 1002.5722972651402 1002.5717749679301 72.443 1 -1.3294838202953216 0.3848455237474817 1.0 ['ENSG00000172732|ENST00000308110|MUS81', 'ENST00000530928.5_1_11:65630557-65632047:+|nuORF', 'ENST00000531905.1_1_11:65631029-65631326:+|nuORF'] 19815 17988 ELTRICDDL True PC9_epitope_Rep5 1076.51721002744 1076.5161099358602 74.207 2 -1.3296928039703089 0.38485294472458803 1.0 ['FGFR3-TACC3|11|fusion', 'FGFR3-TACC3|8|fusion', 'FGFR3-TACC3|10|fusion', 'FGFR3-TACC3|7|fusion', 'FGFR3-TACC3|12|fusion', 'FGFR3-TACC3|5|fusion', 'FGFR3-TACC3|2|fusion', 'FGFR3-TACC3|9|fusion', 'FGFR3-TACC3|14|fusion', 'FGFR3-TACC3|6|fusion', 'FGFR3-TACC3|4|fusion', 'FGFR3-TACC3|1|fusion', 'FGFR3-TACC3|13|fusion', 'FGFR3-TACC3|3|fusion', 'FGFR3-TACC3|15|fusion', 'ENSG00000013810|ENST00000313288|TACC3'] 41469 7252 IAYERGRIYFD True NCI_RA007_Epitope_Rep2 1401.7040992803297 1401.70246490379 32.828 3 -1.329822940499977 0.3848677861416715 1.0 ['ENSG00000115827|ENST00000375255|DCAF17', 'DCAF17|p.S411Vfs*23|1|0.41|ENSG00000115827|chr2:171478028-171478028|A/-|frameshift_variant'] 9329 17396 AVSRDGFWPP True PC9_epitope_Rep1 1130.55089311422 1130.5497899358602 71.716 2 -1.3298309589352917 0.3848677861416715 1.0 ['ENST00000581471.2_1_18:5238694-5238925:+|nuORF'] 57807 11945 LEPLNPSRL True PC9_epitope_Rep6 1037.58694426977 1037.58584993586 57.197 2 -1.3299031695862282 0.38492623553963257 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4'] 16017 9493 EEAERAEYSLQ True NCI_RA007_Epitope_Rep2 1323.59427404783 1323.59316993586 41.538 2 -1.329911060747991 0.38492623553963257 1.0 ['RPAP1|p.G389E|1|0.42|ENSG00000103932|chr15:41528329-41528329|C/T|missense_variant'] 39025 11354 HKLFWYTRRPE True NCI_RA007_Epitope_Rep1 1531.8048163811097 1531.80370993586 48.137 2 -1.3299114157660514 0.38492623553963257 1.0 ['ENST00000367456.5_1_6:149700636-149718820:+|nuORF'] 124021 23537 VKLNLALA True PC9_epitope_Rep6 840.5432885526399 840.54274496793 103.68 1 -1.3300258773435554 0.3849336550060314 1.0 ['nc|ENSG00000186919|Q401N2-2|ZACN', 'ENSG00000186919|ENST00000334586|ZACN'] 112440 23419 TNLRQLTKTSR True PC9_epitope_Rep3 1316.75244645508 1316.7513499358602 95.359 2 -1.3301210673782693 0.3849410742934343 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 89092 20012 REEWRQRLERR True PC9_epitope_Rep1 1612.8658534978797 1612.86421490379 81.802 3 -1.3303212774900872 0.3850171274183432 1.0 ['ENSG00000283329|ENST00000637493|FAM240B'] 74361 10916 NISIFFLQNQF True NCI_RA007_Epitope_Rep2 1369.7030366511697 1369.70192993586 47.068 2 -1.3304113606237369 0.3850171274183432 1.0 ['ENST00000301067.11_1_12:49414036-49414432:-|nuORF'] 104515 21266 SSRDSLREPP True PC9_epitope_Rep1 1142.5679997303398 1142.5669099358602 86.625 2 -1.3304630108563407 0.3850171274183432 1.0 ['nc|ENSG00000124313|Q5JU85-3|IQSEC2', 'ENSG00000124313|ENST00000642864|IQSEC2'] 85671 13659 QLQQQRMQL True PC9_epitope_Rep3 1171.6131761009499 1171.61152490379 57.604 3 -1.3305059396058772 0.3850171274183432 1.0 ['KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.P2609Vfs*41|1|0.27|ENSG00000167548|chr12:49039932-49039946|GGAGGGCGTAGTGGG/C|frameshift_variant', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant', 'KMT2D|p.A3731S|1|0.29|ENSG00000167548|chr12:49033514-49033514|C/A|missense_variant'] 34402 19541 GPVKARKS True PC9_epitope_Rep1 841.51338540669 841.5122899358599 79.987 2 -1.3305178110089193 0.3850171274183432 1.0 ['MEAK7|p.E125Kfs*17|1|0.16|ENSG00000140950|chr16:84495695-84495695|T/-|frameshift_variant'] 39551 19728 HPGGMGIT True NCI_RA007_Epitope_Rep5 768.3588589112401 768.35776993586 82.796 2 -1.3305190225083656 0.3850171274183432 1.0 ['ENSG00000185483|ENST00000371079|ROR1', 'nc|ENSG00000185483|Q01973-2|ROR1'] 55391 17654 LASSTRFPI True PC9_epitope_Rep3 990.5498304850599 990.54872993586 73.098 2 -1.330564664807886 0.3850171274183432 1.0 ['ENST00000602321.5_1_16:67682228-67682996:+|nuORF'] 107854 17233 TARPIFFARKF True NCI_RA007_Epitope_Rep3 1352.7717253476796 1352.7706299358601 75.68 2 -1.3306584470284732 0.3850366063997877 1.0 ['XYLT1|p.T594I|1|0.26|ENSG00000103489|chr16:17134719-17134719|G/A|missense_variant'] 4446 4985 AIYHHIKNR True NCI_RA007_Epitope_Rep3 1150.63596015086 1150.63432490379 26.606 3 -1.3307266258312043 0.3850560849113497 1.0 ['ENST00000426799.1_1_X:65041564-65042074:-|nuORF'] 130320 10780 VTTRLTWL True NCI_RA007_Epitope_Rep4 988.5705659296399 988.56946993586 48.313 2 -1.3308432587956367 0.38509504052489385 1.0 ['ENSG00000137965|ENST00000370747|IFI44', 'ENST00000467790.5_1_1:79115880-79120915:+|nuORF'] 110073 5045 TIAEAKFYRQ True NCI_RA007_Epitope_Rep1 1225.64552177505 1225.64386490379 23.708 3 -1.3308613348450384 0.38509504052489385 1.0 ['BCOR|p.E1696K|1|0.16|ENSG00000183337|chrX:40052291-40052291|C/T|missense_variant'] 73668 17762 NGLTRHRR True NCI_RA007_Epitope_Rep5 1008.5689432202 1008.56784993586 75.106 2 -1.3309502271349707 0.3851098728803338 1.0 ['nc|ENSG00000235109|Q96LW9-2|ZSCAN31', 'ENSG00000235109|ENST00000344279|ZSCAN31'] 48619 8669 KEIHWEASP True NCI_RA007_Epitope_Rep4 1095.53490869691 1095.53380993586 40.132 2 -1.3309980452813874 0.3851098728803338 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 99589 19864 SLFKHRGF True PC9_epitope_Rep3 990.5399345077 990.53882993586 81.643 2 -1.331086064378094 0.3851154152295038 1.0 ['ENST00000549928.5_1_12:60154925-60173457:+|nuORF', 'SLC16A7|p.F262Lfs*39|1|0.2|ENSG00000118596|chr12:59775075-59775075|T/-|frameshift_variant', 'ENSG00000118596|ENST00000547379|SLC16A7'] 8753 5705 AVDYLGRSA True PC9_epitope_Rep2 950.4821448480599 950.48159496793 27.331 1 -1.3311042246626266 0.3851154152295038 1.0 ['nc|ENSG00000174501|Q5JPF3|ANKRD36C', 'ENSG00000174501|ENST00000295246|ANKRD36C'] 66493 19072 LSRYPRYL True PC9_epitope_Rep5 1066.59236400338 1066.59126993586 78.391 2 -1.3311263975651915 0.3851154152295038 1.0 ['ENSG00000261115|ENST00000565468|TMEM178B'] 121896 6943 VGPGWEDG True NCI_RA007_Epitope_Rep5 815.3449826689099 815.34388993586 33.391 2 -1.3311264619259755 0.3851154152295038 1.0 ['ENST00000431180.5_1_3:47058436-47058586:-|nuORF'] 45506 11187 ISERTPSAL True PC9_epitope_Rep4 972.52400966004 972.52290993586 50.809 2 -1.3311842491372872 0.3851228307143116 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 59165 6464 LGFFFQSV True PC9_epitope_Rep2 943.4803539429098 943.47924993586 30.277 2 -1.3312259914194138 0.3851423058369513 1.0 ['ENST00000398637.9_1_12:46576929-46576956:-|nuORF'] 10251 8503 CFTCVMCH True NCI_RA007_Epitope_Rep4 942.32202210366 942.32092993586 39.507 2 -1.3312396193316447 0.38514320168827254 1.0 ['ENSG00000145012|ENST00000617246|LPP'] 37609 11794 GYSGSKPDVI True NCI_RA007_Epitope_Rep1 1021.5080252427299 1021.5074749679301 49.854 1 -1.3312582592611164 0.38514320168827254 1.0 ['ENSG00000171817|ENST00000316433|ZNF540'] 130179 11184 VTRTAIAI True PC9_epitope_Rep1 843.5178020807898 843.51670993586 47.903 2 -1.3312748904265548 0.38514320168827254 1.0 ['MCHR1|p.S394Cfs*16|1|0.24|ENSG00000128285|chr22:40681838-40681848|GTCGGTGAAGC/-|frameshift_variant', 'ENSG00000128285|ENST00000249016|MCHR1'] 139842 4117 YVDKEKEMWH True NCI_RA007_Epitope_Rep1 1363.6230720783099 1363.62142490379 20.087 3 -1.3312806872352878 0.38514320168827254 1.0 ['nc|ENSG00000077800|O75344-3|FKBP6', 'nc|ENSG00000077800|O75344-2|FKBP6', 'ENSG00000077800|ENST00000252037|FKBP6'] 127801 13677 VRKSSGRGEL True NCI_RA007_Epitope_Rep5 1087.60980497267 1087.6087099358601 59.292 2 -1.331283835880894 0.38514320168827254 1.0 ['SYT4|p.N351Mfs*20|1|0.18|ENSG00000132872|chr18:43270569-43270569|G/-|frameshift_variant', 'nc|ENSG00000132872|Q9H2B2-2|SYT4', 'ENSG00000132872|ENST00000255224|SYT4'] 21631 16479 ERTHKNLSDME True H1975_Epitope_Rep1 1358.6248629834597 1358.62376993586 68.754 2 -1.3312993486512328 0.38514597175829346 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 3792 18257 AGVFRCPLL True PC9_epitope_Rep1 974.5371576263799 974.53606993586 75.015 2 -1.331335444288665 0.38514597175829346 1.0 ['ENST00000506326.1_1_3:134085404-134085665:-|nuORF'] 140030 5235 YVLMLECW True PC9_epitope_Rep5 1055.48201081903 1055.4809099358602 25.152 2 -1.3314287380228667 0.3851487416947027 1.0 ['ENSG00000125508|ENST00000217188|SRMS'] 3335 20135 AGHCSGGS True H1975_Epitope_Rep2 674.24422308182 674.24367496793 83.439 1 -1.3314381388833747 0.3851487416947027 1.0 ['ENST00000529239.1_1_8:61851661-61851937:-|nuORF'] 63768 16833 LPRWLRYTQRS True PC9_epitope_Rep1 1474.8157154179798 1474.81460993586 69.572 2 -1.3314638022874459 0.38516821415651753 1.0 ['nc|ENSG00000108823|Q16586-2|SGCA', 'ENSG00000108823|ENST00000262018|SGCA'] 65982 22909 LSLSLLTLLC True PC9_epitope_Rep5 1074.63586860814 1074.63527496793 93.112 1 -1.3316017691937732 0.3851830415279988 1.0 ['ENST00000306732.7_1_4:111543981-111544221:-|nuORF'] 802 8500 ACSCVHGR True H1975_Epitope_Rep3 831.34797695771 831.34686993586 37.68 2 -1.3316053780221024 0.3851830415279988 1.0 ['ENSG00000136011|ENST00000388887|STAB2', 'STAB2|p.G1653Vfs*2|1|0.09|ENSG00000136011|chr12:103728870-103728870|G/-|frameshift_variant', 'STAB2|p.C1406R|1|0.16|ENSG00000136011|chr12:103708464-103708464|T/C|missense_variant'] 12308 11157 DITEVNWIVQ True NCI_RA007_Epitope_Rep2 1215.61355294043 1215.61244993586 47.98 2 -1.3317303904213125 0.38520992596522535 1.0 ['ENST00000556558.1_1_14:69551426-69551618:+|nuORF'] 96516 10178 SELIRHQRT True H1975_Epitope_Rep1 1138.62070400954 1138.6196099358601 44.089 2 -1.331739523869484 0.38520992596522535 1.0 ['ENSG00000267041|ENST00000591344|ZNF850'] 90482 20157 RIYQELVT True PC9_epitope_Rep6 1020.5603951687599 1020.55928993586 90.206 2 -1.3318174019134223 0.3852163533993224 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 39290 18121 HLPYRHIL True PC9_epitope_Rep2 1047.59778373699 1047.59668993586 75.004 2 -1.33183336187318 0.3852163533993224 1.0 ['ZSWIM3|p.C561Y|1|0.27|ENSG00000132801|chr20:45878240-45878240|G/A|missense_variant'] 18877 8572 ELEKQEKTKE True H1975_Epitope_Rep1 1260.6561460284 1260.65504993586 37.899 2 -1.3318947155049734 0.3852163533993224 1.0 ['ENSG00000122735|ENST00000242317|DNAI1'] 100711 7783 SLRGGSPP True H1975_Epitope_Rep3 769.40825163181 769.40770496793 34.923 1 -1.3319102300376255 0.3852163533993224 1.0 ['ENST00000361490.8_1_10:100176929-100177052:-|nuORF'] 12853 7927 DLLEEFAPTP True NCI_RA007_Epitope_Rep1 1130.54955570154 1130.5484499358602 34.827 2 -1.3319209255311821 0.3852163533993224 1.0 ['AAK1|p.A886P|1|0.31|ENSG00000115977|chr2:69478975-69478975|C/G|missense_variant'] 4043 8744 AHLYQGLGPVV True PC9_epitope_Rep1 1152.62914343492 1152.6274949037902 38.472 3 -1.331922429278983 0.3852163533993224 1.0 ['nc|ENSG00000102145|P15976-3|GATA1', 'ENSG00000102145|ENST00000376670|GATA1'] 91475 22247 RNRYWKEHH True NCI_RA007_Epitope_Rep5 1324.65373547332 1324.6526299358602 92.721 2 -1.33194105788278 0.3852163533993224 1.0 ['ENSG00000162482|ENST00000361640|AKR7A3'] 30603 4634 GAKSKKDP True PC9_epitope_Rep3 829.4657665079299 829.46466993586 22.919 2 -1.33199990110009 0.3852163533993224 1.0 ['ENSG00000122870|ENST00000373886|BICC1', 'nc|ENSG00000122870|Q9H694-2|BICC1'] 62849 21920 LMKLLPPPI True PC9_epitope_Rep4 1020.6405600657599 1020.63946993586 92.524 2 -1.3320155634349333 0.3852163533993224 1.0 ['ENSG00000176102|ENST00000323959|CSTF3'] 81404 7674 PPVQYEPV True NCI_RA007_Epitope_Rep1 927.4701831820298 927.46908993586 33.842 2 -1.3320700675363992 0.3852432334679607 1.0 ['ENSG00000101310|ENST00000650089|SEC23B'] 76028 21316 NRKLIYNFK True NCI_RA007_Epitope_Rep4 1194.6873270173799 1194.68569490379 92.403 3 -1.3320975737673146 0.3852432334679607 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF', 'ENSG00000125900|ENST00000381623|SIRPD'] 73117 7328 NDTYFLVLR True NCI_RA007_Epitope_Rep4 1139.5975089534697 1139.59640993586 34.826 2 -1.332160790474964 0.3852506449979505 1.0 ['ENST00000472647.5_2_1:169336955-169337057:-|nuORF'] 528 20574 AAPSRREV True PC9_epitope_Rep4 884.4828135543999 884.48170993586 87.291 2 -1.3322185214465783 0.38525805634923505 1.0 ['SVA_F_dup683|chr12:56075092-56076774:-|1.8546114936796516|0.0829394271016015|4.48|483.0|20|2|sense', 'SVA_D_dup1026|chr13:30838585-30840641:-|4.257143864425426|0.3514679219565426|3.6|489.0|8|1|sense'] 106275 5299 SVQQLEDA True PC9_epitope_Rep6 888.4188758851599 888.41776993586 28.185 2 -1.332228121303074 0.3852654675218209 1.0 ['nc|ENSG00000182504|Q8IW35-2|CEP97', 'ENSG00000182504|ENST00000341893|CEP97', 'CEP97|p.E787K|1|0.12|ENSG00000182504|chr3:101765312-101765312|G/A|missense_variant'] 22596 6475 ETPQTVPA True PC9_epitope_Rep1 841.4181476091699 841.4175949679301 29.712 1 -1.3324795430028435 0.38532663074270973 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 68488 6824 LTVGLTAS True PC9_epitope_Rep1 760.4330693973201 760.43196993586 31.054 2 -1.332502195681096 0.38532663074270973 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'nc|ENSG00000107104|Q14678-2|KANK1', 'ENST00000354485.5_1_9:676972-730286:+|nuORF', 'ENST00000489369.5_1_9:676972-732786:+|nuORF'] 64891 6299 LSASITKQPI True NCI_RA007_Epitope_Rep3 1056.6179100448799 1056.6168099358601 31.779 2 -1.3325340101946357 0.38532663074270973 1.0 ['nc|ENSG00000169762|Q6NXT6-2|TAPT1', 'ENSG00000169762|ENST00000405303|TAPT1'] 137694 24394 YMISTSET True H1975_Epitope_Rep2 930.4004489397 930.39934993586 100.37 2 -1.3325698089707874 0.38532663074270973 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5'] 14480 3432 DTTQKYLYRD True H1975_Epitope_Rep1 1301.62518025329 1301.62354490379 17.396 3 -1.3325887601713327 0.38532663074270973 1.0 ['ENSG00000171466|ENST00000453372|ZNF562'] 39320 23721 HLRSIKRYF True NCI_RA007_Epitope_Rep4 1218.69856040742 1218.69691490379 102.86 3 -1.3326656113425632 0.38535162371320425 1.0 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 100638 15460 SLQQPVDYP True PC9_epitope_Rep1 1045.50802524273 1045.5069299358602 64.288 2 -1.3328156133363536 0.38535162371320425 1.0 ['SSH1|p.D472Y|1|0.21|ENSG00000084112|chr12:108792765-108792765|C/A|missense_variant'] 12421 12101 DKIQQMNPP True PC9_epitope_Rep1 1069.52262976105 1069.5215299358601 51.406 2 -1.332847657465715 0.38535162371320425 1.0 ['MYH15|p.H1065Pfs*7|1|0.16|ENSG00000144821|chr3:108437641-108437641|T/-|frameshift_variant', 'ENSG00000144821|ENST00000693548|MYH15', 'MYH15|p.K849Sfs*9|1|0.15|ENSG00000144821|chr3:108444809-108444809|T/-|frameshift_variant'] 13234 16142 DLTTRNYAR True H1975_Epitope_Rep2 1108.5625204270798 1108.5614299358601 67.302 2 -1.332855539978277 0.38535162371320425 1.0 ['ENSG00000116497|ENST00000373475|S100PBP'] 129091 8547 VTATARPCL True NCI_RA007_Epitope_Rep5 930.49568673722 930.49458993586 39.558 2 -1.3328897561479842 0.38535162371320425 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'nc|ENSG00000030066|Q12769-2|NUP160'] 126239 21955 VPGWKLCP True PC9_epitope_Rep5 898.4734947406598 898.47238993586 89.485 2 -1.3329793960147358 0.3853590327752263 1.0 ['ENSG00000152219|ENST00000282032|ARL14EP'] 95667 8969 SAVTLAPASL True PC9_epitope_Rep5 928.52294703088 928.52184993586 39.442 2 -1.3331674629234824 0.3854026036644166 1.0 ['ENST00000546727.5_1_12:113538464-113545121:-|nuORF'] 64640 15701 LRGGGKRNKR True NCI_RA007_Epitope_Rep3 1140.69520636248 1140.69355490379 69.398 3 -1.3331905762584193 0.38540812882696107 1.0 ['ENST00000475854.1_1_X:100914419-100914797:-|nuORF'] 45543 8192 ISGDRGVL True PC9_epitope_Rep5 815.4501164437899 815.44900993586 36.452 2 -1.3332046822304013 0.38540812882696107 1.0 ['nc|ENSG00000077800|O75344-3|FKBP6', 'nc|ENSG00000077800|O75344-2|FKBP6', 'ENSG00000077800|ENST00000252037|FKBP6'] 59232 6221 LGGKQRAA True PC9_epitope_Rep3 799.4664352142698 799.46532993586 28.968 2 -1.3332345216610653 0.38540812882696107 1.0 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1'] 100760 8560 SLRPEPYVRAF True H1975_Epitope_Rep3 1333.7142700412098 1333.7131699358602 37.914 2 -1.3332442623265652 0.38540812882696107 1.0 ['ENST00000380535.8_1_17:7461620-7461785:+|nuORF'] 20043 21781 ENARLEYSLTG True PC9_epitope_Rep5 1251.6095301891498 1251.6084299358602 88.812 2 -1.3333797147814082 0.38541553667209066 1.0 ['ENSG00000008300|ENST00000164024|CELSR3', 'nc|ENSG00000008300|Q9NYQ7-2|CELSR3'] 26211 5893 FHVCPAERN True PC9_epitope_Rep5 1071.4919983391098 1071.4909099358601 27.66 2 -1.333403932025741 0.38542294433864477 1.0 ['ENST00000357606.7_1_12:56221676-56222300:-|nuORF', 'DNAJC14|p.P78Qfs*178|1|0.11|ENSG00000135392|chr12:55828426-55828426|G/-|frameshift_variant'] 125861 13658 VNRICGLP True H1975_Epitope_Rep2 870.4745573698199 870.47346993586 57.674 2 -1.3334681517740359 0.3854498119757015 1.0 ['GPC5|p.R347L|3|0.32|ENSG00000179399|chr13:91728551-91728551|G/T|missense_variant'] 99823 13153 SLGTTWTRL True PC9_epitope_Rep4 1033.55564414149 1033.5545499358602 58.489 2 -1.3334719365487606 0.3854498119757015 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S3673Afs*24|1|0.28|ENSG00000117983|chr11:1247893-1247893|C/-|frameshift_variant'] 112436 19756 TNLRQLTKTSR True NCI_RA007_Epitope_Rep5 1316.75244645508 1316.7513499358602 82.902 2 -1.3335957743070668 0.3854766783174641 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 72639 6759 MVYMFKYDSTH True NCI_RA007_Epitope_Rep2 1420.61554416972 1420.6144499358602 30.906 2 -1.3336004408064286 0.3854766783174641 1.0 ['ENSG00000105679|ENST00000222286|GAPDHS'] 118121 9777 VAVASPSL True H1975_Epitope_Rep3 742.42250471362 742.4219549679301 42.63 1 -1.3336571974472426 0.38549613720456544 1.0 ['ENSG00000177508|ENST00000329734|IRX3', 'ENST00000558180.2_1_16:54318400-54319510:-|nuORF'] 78340 6822 PATEYEISLNS True H1975_Epitope_Rep3 1222.5717476981 1222.57064993586 31.195 2 -1.3337717987768725 0.3855035433640264 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'TNR|p.D691Efs*23|1|0.14|ENSG00000116147|chr1:175366117-175366119|AGG/T|frameshift_variant', 'ENSG00000116147|ENST00000367674|TNR'] 92578 24895 RRCHVGSV True PC9_epitope_Rep3 912.4712033248799 912.47010993586 101.14 2 -1.3338113506517357 0.38551094934496766 1.0 ['ENST00000462807.5_1_1:228327956-228334566:+|nuORF'] 92631 22928 RRFHREFPKFF True PC9_epitope_Rep4 1565.8367852157296 1565.83568993586 96.413 2 -1.3338438539381172 0.3855183551473956 1.0 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 98768 8079 SISIGELAL True H1975_Epitope_Rep3 901.51204799401 901.51094993586 36.05 2 -1.333927288318041 0.3855257607713167 1.0 ['ENSG00000188738|ENST00000424728|FSIP2', 'FSIP2|p.K5611Efs*3|1|0.15|ENSG00000188738|chr2:185806130-185806131|-/A|frameshift_variant', 'FSIP2|p.K6528Nfs*5|1|0.11|ENSG00000188738|chr2:185808884-185808884|A/-|frameshift_variant'] 82430 23769 PVCHLLTA True PC9_epitope_Rep1 852.45275929608 852.45166993586 96.222 2 -1.3339793527329453 0.3855285199513118 1.0 ['ENST00000603928.2_2_9:136894278-136894515:+|nuORF'] 121334 17739 VGHQGSLFL True PC9_epitope_Rep6 956.5079656730799 956.50686993586 80.867 2 -1.3339981769533664 0.3855285199513118 1.0 ['ENST00000525065.1_1_11:117062460-117063438:+|nuORF'] 78809 23453 PENPPPVLMEP True NCI_RA007_Epitope_Rep4 1218.59546034814 1218.59380490379 101.78 3 -1.3340895116685596 0.3855340379122932 1.0 ['ENSG00000137310|ENST00000376257|TCF19'] 58612 19112 LFFILNRRF True NCI_RA007_Epitope_Rep5 1224.7131478423996 1224.71204993586 80.385 2 -1.3341207083767816 0.3855340379122932 1.0 ['ENST00000372398.5_1_9:132995575-132995641:+|nuORF'] 62253 9214 LLQELAVG True PC9_epitope_Rep4 841.4909186266099 841.48982993586 43.04 2 -1.3341510563473982 0.3855340379122932 1.0 ['ENST00000609803.2_1_12:46120731-46120878:-|nuORF'] 140927 17763 YYYRDRDWRWV True H1975_Epitope_Rep1 1676.7848092125198 1676.78370993586 73.938 2 -1.3341538045557781 0.3855340379122932 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 40198 7116 HRGEKRQVRRD True PC9_epitope_Rep5 1435.7868749011898 1435.78522490379 32.339 3 -1.3342753372420277 0.38554884735427736 1.0 ['nc|ENSG00000114904|P51957-3|NEK4', 'nc|ENSG00000114904|P51957-2|NEK4', 'ENSG00000114904|ENST00000233027|NEK4'] 130899 11666 VVHHRIHTG True PC9_epitope_Rep5 1054.57844527474 1054.57787496793 49.869 1 -1.334291766505539 0.38554884735427736 1.0 ['ENSG00000256223|ENST00000248211|ZNF10'] 59470 15184 LGNTVEKI True PC9_epitope_Rep3 872.4967322830399 872.49562993586 63.549 2 -1.334371474502723 0.38555436393652015 1.0 ['FPGS|p.D234N|1|0.33|ENSG00000136877|chr9:127807644-127807644|G/A|missense_variant'] 13042 6550 DLRAHRRTHA True NCI_RA007_Epitope_Rep1 1231.6646345101901 1231.66297490379 29.493 3 -1.334410375232346 0.38555436393652015 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 31952 8885 GESDSEEVRN True H1975_Epitope_Rep1 1120.4632598782798 1120.4626749679298 39.088 1 -1.3345083891536633 0.38555436393652015 1.0 ['ENSG00000214338|ENST00000525778|SOGA3'] 129099 13023 VTATYRQAL True PC9_epitope_Rep1 1021.55564414149 1021.55454993586 54.963 2 -1.3345555166172345 0.38555436393652015 1.0 ['ENSG00000163545|ENST00000367157|NUAK2'] 12202 9922 DINNPRDFI True H1975_Epitope_Rep1 1102.54072235334 1102.5396299358601 43.1 2 -1.334628403075089 0.38556917181795175 1.0 ['ENSG00000165841|ENST00000371321|CYP2C19'] 114633 13781 TSPEPPCP True H1975_Epitope_Rep2 826.3531048244599 826.35255496793 58.153 1 -1.3346464035669945 0.38556917181795175 1.0 ['nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'chr1:24319941-24331426|424|14.04|0.52|4.74|+|ENST00000524724|GRHL3,GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3'] 108146 8204 TDQPALPNPCS True H1975_Epitope_Rep1 1141.50737361973 1141.50626993586 36.499 2 -1.3348895415431914 0.3856125682204258 1.0 ['nc|ENSG00000114993|Q9BST9-3|RTKN', 'nc|ENSG00000114993|Q9BST9-2|RTKN', 'ENSG00000114993|ENST00000272430|RTKN'] 20380 10602 EPKGSYPALI True NCI_RA007_Epitope_Rep5 1073.57571087973 1073.57460993586 47.418 2 -1.33493029246673 0.3856125682204258 1.0 ['ENST00000392238.2_1_2:203631321-203631381:+|nuORF'] 69683 11572 LVWRMQWQFWP True NCI_RA007_Epitope_Rep2 1575.7809101323899 1575.7798099358602 49.602 2 -1.3349390826029837 0.3856125682204258 1.0 ['ENST00000464839.5_1_1:89615102-89615213:-|nuORF'] 87110 12878 QSFNNFMLRI True PC9_epitope_Rep6 1268.6335771923598 1268.63194490379 61.057 3 -1.3350010624589579 0.3856125682204258 1.0 ['nc|ENSG00000138031|O60266-2|ADCY3', 'ENSG00000138031|ENST00000679454|ADCY3', 'ENST00000485887.1_1_2:25043436-25046221:-|nuORF'] 57719 6560 LENLELTYGYL True H1975_Epitope_Rep1 1326.67073346338 1326.66962993586 30.29 2 -1.3350364507689738 0.3856125682204258 1.0 ['ENSG00000279169|ENST00000625019|PRAMEF13', 'ENSG00000204481|ENST00000334600|PRAMEF14', 'ENSG00000116721|ENST00000332296|PRAMEF1'] 31730 17079 GEISKQAP True PC9_epitope_Rep1 828.4341320264799 828.43302993586 70.52 2 -1.3350566067953151 0.3856125682204258 1.0 ['nc|ENSG00000168826|Q6ZSB9-4|ZBTB49', 'nc|ENSG00000168826|Q6ZSB9-3|ZBTB49', 'nc|ENSG00000168826|Q6ZSB9-5|ZBTB49', 'nc|ENSG00000168826|Q6ZSB9-2|ZBTB49', 'ENSG00000168826|ENST00000337872|ZBTB49'] 109275 13628 TGCISTLK True H1975_Epitope_Rep1 821.43168949833 821.4311449679301 57.552 1 -1.335111743968905 0.3856125682204258 1.0 ['FAT3|p.W2874C|1|0.29|ENSG00000165323|chr11:92801635-92801635|G/C|missense_variant'] 16448 10837 EELPSPGTK True NCI_RA007_Epitope_Rep2 956.4814761417199 956.48092496793 46.758 1 -1.335142811037408 0.3856125682204258 1.0 ['ENSG00000172244|ENST00000306862|C5orf34', 'ENST00000514462.1_1_5:43505848-43515051:-|nuORF'] 15218 12207 EAFRSVCVP True H1975_Epitope_Rep3 1006.4906013567798 1006.48950993586 52.126 2 -1.3351608884685788 0.3856125682204258 1.0 ['SVA_D_dup775|chrX:71340697-71342586:-|1.2848477161067438|0.0874932661462981|3.88|488.0|59|2|anti-sense'] 66993 12592 LTAEEERNP True H1975_Epitope_Rep1 1057.50400249145 1057.50290993586 53.484 2 -1.335173997677979 0.3856125682204258 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4'] 16321 22541 EEIWKADRPGN True H1975_Epitope_Rep1 1313.6364136433297 1313.63530993586 93.758 2 -1.3351785310553375 0.3856125682204258 1.0 ['ENSG00000165072|ENST00000377182|MAMDC2'] 98781 5823 SISQKEFSWEW True NCI_RA007_Epitope_Rep1 1425.65648038157 1425.65482490379 26.705 3 -1.3352633113434127 0.3856125682204258 1.0 ['ENST00000436636.6_1_3:170841429-170843734:-|nuORF'] 16141 5636 EEELESENAPV True NCI_RA007_Epitope_Rep2 1244.54084149264 1244.53974993586 26.536 2 -1.3352883816414436 0.3856125682204258 1.0 ['ENST00000487163.5_1_1:161133902-161134067:+|nuORF', 'ENST00000485277.1_1_1:161133669-161135234:+|nuORF', 'nc|ENSG00000143258|Q9UK80-3|USP21', 'ENSG00000143258|ENST00000368002|USP21'] 105632 5901 SVFESPGTCP True PC9_epitope_Rep2 1022.4378970775798 1022.43678993586 28.093 2 -1.3352885700632928 0.3856125682204258 1.0 ['nc|ENSG00000008988|P60866-2|RPS20'] 123918 25455 VKKATILIS True PC9_epitope_Rep5 971.6379172134699 971.63736496793 103.15 1 -1.3354306738017616 0.3856153243780495 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2', 'PAPPA2|p.H356N|1|0.2|ENSG00000116183|chr1:176594670-176594670|C/A|missense_variant'] 24818 5159 FCMQCWSEY True H1975_Epitope_Rep2 1195.4136735590298 1195.41202490379 24.921 3 -1.335460892092557 0.3856153243780495 1.0 ['ENSG00000166233|ENST00000379887|ARIH1'] 75062 18429 NMILVQIL True NCI_RA007_Epitope_Rep5 942.55722436462 942.55612993586 77.71 2 -1.335575230193008 0.3856180804028576 1.0 ['ENSG00000082898|ENST00000401558|XPO1', 'ENST00000428210.5_1_2:61720980-61752425:-|nuORF'] 46641 4788 ITVAYYYYL True NCI_RA007_Epitope_Rep2 1167.58521293427 1167.5841099358602 23.254 2 -1.3356041660547546 0.3856180804028576 1.0 ['PAQR9|p.S168I|1|0.19|ENSG00000188582|chr3:142962834-142962834|C/A|missense_variant'] 32278 9706 GFRIYLEP True NCI_RA007_Epitope_Rep4 993.5283667644899 993.52726993586 44.179 2 -1.3356531591189853 0.38562548188126444 1.0 ['nc|ENSG00000127152|Q9C0K0-2|BCL11B', 'ENSG00000127152|ENST00000357195|BCL11B'] 63868 10164 LPVDGRPLP True NCI_RA007_Epitope_Rep3 962.5549158654999 962.55380993586 47.067 2 -1.3358185438858172 0.385640284303096 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 130973 15607 VVKDTTNKKT True NCI_RA007_Epitope_Rep3 1132.6451874218799 1132.6440899358602 68.981 2 -1.3358415387132756 0.385640284303096 1.0 ['nc|ENSG00000138193|Q9P212-2|PLCE1', 'ENSG00000138193|ENST00000371380|PLCE1'] 139652 19998 YTSGNKGY True PC9_epitope_Rep6 888.39774651776 888.39664993586 89.588 2 -1.335976533686922 0.385679178913892 1.0 ['nc|ENSG00000168813|Q8TCN5-2|ZNF507', 'ENSG00000168813|ENST00000355898|ZNF507'] 61180 11878 LLDLPTVVP True H1975_Epitope_Rep1 965.57973363101 965.57862993586 50.688 2 -1.33597986828951 0.385679178913892 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 30772 5114 GAPFLKEGASE True NCI_RA007_Epitope_Rep5 1104.54513902744 1104.5440499358601 26.369 2 -1.336012737714537 0.38568365773752167 1.0 ['nc|ENSG00000198848|P23141-3|CES1', 'nc|ENSG00000198848|P23141|CES1', 'ENSG00000198848|ENST00000360526|CES1', 'ENST00000421606.6_2_16:55801397-55827869:+|nuORF'] 113054 5000 TPVNYTNWYRG True PC9_epitope_Rep5 1369.64149902377 1369.6398449037902 24.265 3 -1.3360588477427615 0.38568365773752167 1.0 ['ENSG00000185303|ENST00000372325|SFTPA2', 'ENSG00000122852|ENST00000398636|SFTPA1', 'nc|ENSG00000122852|Q8IWL2-2|SFTPA1', 'PIGR-SFTPA1|1|fusion'] 31943 5460 GESAVAEDPTW True H1975_Epitope_Rep3 1160.49858275784 1160.4974899358601 26.058 2 -1.3360613841101852 0.38568365773752167 1.0 ['nc|nan|A6NN90|C2orf81', 'ENSG00000284308|ENST00000684111|C2orf81'] 123975 11468 VKKKLRKKGKK True PC9_epitope_Rep6 1339.9503584159895 1339.94926993586 55.178 2 -1.3361221348619725 0.38568365773752167 1.0 ['nc|ENSG00000166960|Q5BJE1-4|CCDC178', 'nc|ENSG00000166960|Q5BJE1-3|CCDC178', 'ENSG00000166960|ENST00000383096|CCDC178'] 10725 21929 CVIAAVKIFPR True PC9_epitope_Rep3 1215.71618461751 1215.7145249037899 89.65 3 -1.3361446926595364 0.38568365773752167 1.0 ['ENSG00000160886|ENST00000292430|LY6K'] 64404 11526 LQREEEAPRRQ True H1975_Epitope_Rep1 1410.7327736396599 1410.73166993586 49.32 2 -1.336155203725105 0.38568365773752167 1.0 ['CCK|p.A36E|1|0.11|ENSG00000187094|chr3:42263524-42263524|G/T|missense_variant'] 125584 20331 VLYYKKIL True PC9_epitope_Rep2 1038.6477536211798 1038.64664993586 83.625 2 -1.3361995265407576 0.38568365773752167 1.0 ['nc|ENSG00000103599|Q86VS3-4|IQCH', 'nc|ENSG00000103599|Q86VS3-2|IQCH', 'ENSG00000103599|ENST00000335894|IQCH'] 65220 11392 LSEARVAAP True PC9_epitope_Rep5 912.5028802926398 912.50178993586 48.817 2 -1.3362143608968935 0.38568365773752167 1.0 ['ENST00000403097.5_1_7:50778683-50823651:-|nuORF', 'ENST00000401949.5_1_7:50800040-50823651:-|nuORF', 'ENST00000335866.7_1_7:50742328-50823651:-|nuORF'] 60481 7914 LILYSVLRLN True NCI_RA007_Epitope_Rep3 1202.7386938839 1202.7370349037901 38.24 3 -1.3362370167087785 0.38568365773752167 1.0 ['ENSG00000181023|ENST00000317121|OR56B1'] 770 25027 AAWTAERNLN True PC9_epitope_Rep2 1144.56252042708 1144.5614299358601 101.93 2 -1.3363054098613634 0.38568365773752167 1.0 ['ENSG00000212710|ENST00000391403|CTAGE1'] 35421 10174 GTDLPSKST True PC9_epitope_Rep4 904.4501760134401 904.44906993586 46.809 2 -1.336362011711503 0.38568365773752167 1.0 ['ENSG00000198597|ENST00000355537|ZNF536'] 5065 17585 ALLMLPSNSHA True PC9_epitope_Rep5 1152.5961290544801 1152.59449490379 72.649 3 -1.3364387398488449 0.38568365773752167 1.0 ['ENST00000546093.5_1_16:86585831-86588279:-|nuORF'] 124628 21523 VLIAGLPE True H1975_Epitope_Rep2 810.48510497018 810.48400993586 89.047 2 -1.3366418005972203 0.3857271906052394 1.0 ['ENST00000372059.6_1_X:109459854-109561030:-|nuORF'] 81152 25283 PPKPLRPRQL True H1975_Epitope_Rep2 1200.74551059984 1200.7438649037902 103.85 3 -1.3366859841700478 0.38573458916483994 1.0 ['nc|ENSG00000175920|Q18PE1-2|DOK7', 'ENSG00000175920|ENST00000340083|DOK7', 'nc|ENSG00000175920|Q18PE1-3|DOK7'] 34994 24856 GRALWHLRLA True H1975_Epitope_Rep3 1191.69889476059 1191.6972449037899 103.39 3 -1.3368278983021893 0.3857855181384593 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 99335 14055 SLDRAASPVL True PC9_epitope_Rep5 1027.5662088251897 1027.5651099358602 59.076 2 -1.3368375330829028 0.3857855181384593 1.0 ['ENSG00000111145|ENST00000228741|ELK3', 'ENST00000549529.1_1_12:96649292-96660955:+|nuORF'] 110890 9462 TLAGWGPG True PC9_epitope_Rep1 757.3758888743698 757.37478993586 41.251 2 -1.3368813967638429 0.38579291572823954 1.0 ['ENST00000434376.6_1_17:1543256-1543940:-|nuORF', 'ENST00000263071.8_1_17:1543248-1547228:-|nuORF'] 12662 8375 DLEMVRYLLEW True H1975_Epitope_Rep1 1465.72753714685 1465.72642993586 37.143 2 -1.3370434150395274 0.38584194426379553 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27', 'SENP2-ANKRD27|1|fusion'] 127816 21351 VRLIHLRLK True PC9_epitope_Rep5 1146.7713314248601 1146.76969490379 87.186 3 -1.3370467259128611 0.38584194426379553 1.0 ['nc|ENSG00000140995|Q6ZN54|DEF8', 'nc|ENSG00000140995|Q6ZN54-2|DEF8', 'nc|ENSG00000140995|Q6ZN54-4|DEF8', 'nc|ENSG00000140995|Q6ZN54-6|DEF8', 'nc|ENSG00000140995|Q6ZN54-3|DEF8', 'ENSG00000140995|ENST00000563594|DEF8'] 41007 17865 HYFRRVPRDW True NCI_RA007_Epitope_Rep2 1430.7319857940197 1430.73034490379 74.23 3 -1.3370858026958852 0.38584194426379553 1.0 ['ENST00000438748.5_1_2:113299624-113300117:+|nuORF', 'ENST00000263331.9_1_2:113299748-113300117:+|nuORF'] 65395 10689 LSERMCHPGVR True H1975_Epitope_Rep3 1283.62269523883 1283.6215899358601 46.19 2 -1.3370896307752982 0.38584194426379553 1.0 ['ENST00000526437.5_1_11:30605673-30605736:-|nuORF'] 42739 14168 IFDRELHRQTG True NCI_RA007_Epitope_Rep5 1370.7054962626598 1370.70438993586 61.187 2 -1.3371013850003108 0.38584194426379553 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2', 'chr1:183207943-183215453|223|30.46|0.17|7.49|+|2|None,LAMC2|1'] 20378 10205 EPITPKSDV True H1975_Epitope_Rep2 984.5127762699999 984.51166993586 44.259 2 -1.3372824036007758 0.3858493406394894 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 74650 8947 NLFYWATYLNR True PC9_epitope_Rep1 1459.72483472491 1459.72318490379 39.258 3 -1.3373956981286668 0.38588082277566355 1.0 ['GABRA5|p.V443F|1|0.32|ENSG00000186297|chr15:26948171-26948171|G/T|missense_variant'] 91705 24088 RPGRPRGPL True H1975_Epitope_Rep2 1004.5991807193199 1004.59808993586 99.187 2 -1.3374459566215744 0.3859076567354705 1.0 ['ENST00000424094.6_1_20:57425716-57425887:-|nuORF'] 27448 8676 FNNSEYHL True PC9_epitope_Rep6 1022.4457593393402 1022.4446699358599 43.218 2 -1.3374598619135993 0.3859076567354705 1.0 ['ENSG00000090402|ENST00000264382|SI'] 134062 5262 WQLLALCAP True NCI_RA007_Epitope_Rep4 1013.5368232732098 1013.53572993586 26.786 2 -1.337490534889562 0.38592709449776613 1.0 ['ENSG00000054690|ENST00000329153|PLEKHH1'] 118356 20638 VDGGGSCL True H1975_Epitope_Rep1 706.2955899483401 706.29504496793 85.802 1 -1.3376217522569065 0.3859344894026975 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF'] 44497 19482 INWLWLGWTV True PC9_epitope_Rep4 1286.6811790077797 1286.68008993586 83.054 2 -1.337683604769627 0.38593723657908047 1.0 ['ENST00000560170.1_1_15:96828545-96870526:-|nuORF', 'ENST00000502125.6_1_15:96826128-96870526:-|nuORF', 'ENST00000560010.1_1_15:96833853-96870526:-|nuORF'] 128578 17907 VSKELQAA True PC9_epitope_Rep2 844.4654321547598 844.4648849679301 74.183 1 -1.3376966125578338 0.38593723657908047 1.0 ['CON__Q03247'] 97507 6495 SGPPLKAG True NCI_RA007_Epitope_Rep4 725.40718900265 725.4066449679301 31.584 1 -1.3377239271062413 0.385948223961469 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000508497.5_1_4:17579055-17583440:+|nuORF', 'ENST00000512397.1_1_4:17579088-17584030:+|nuORF'] 97231 5361 SFLPFHLMLC True NCI_RA007_Epitope_Rep1 1206.59295825034 1206.5913149037901 24.932 3 -1.3377955994674322 0.385948223961469 1.0 ['ENST00000293604.10_1_6:30620706-30620838:+|nuORF'] 123255 22409 VHPLVYCP True PC9_epitope_Rep4 926.46840936022 926.46730993586 94.428 2 -1.3378407440157363 0.385948223961469 1.0 ['ENST00000527587.5_1_20:57288690-57290379:+|nuORF', 'nc|ENSG00000215440|Q8NDH3-5|NPEPL1', 'nc|ENSG00000215440|Q8NDH3-4|NPEPL1', 'ENSG00000215440|ENST00000356091|NPEPL1', 'ENST00000525068.1_1_20:57288807-57289834:+|nuORF', 'ENST00000529976.5_1_20:57288690-57289536:+|nuORF'] 94807 9267 RYLRRKERPDR True NCI_RA007_Epitope_Rep1 1543.8807752860298 1543.8796699358602 40.045 2 -1.3378558844482962 0.385948223961469 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 56755 9586 LEAPPERL True PC9_epitope_Rep2 923.5076313199099 923.50652993586 42.216 2 -1.3378708253957878 0.385948223961469 1.0 ['ENSG00000185215|ENST00000560869|TNFAIP2'] 82698 9874 PVPENWLHKEA True NCI_RA007_Epitope_Rep4 1318.66698549562 1318.6658899358602 44.828 2 -1.3378824063614834 0.385948223961469 1.0 ['ENSG00000168496|ENST00000305885|FEN1', 'nc|ENSG00000168496|P39748-2|FEN1'] 57892 15005 LEQHQEPVL True PC9_epitope_Rep6 1091.56112344475 1091.56002993586 69.74 2 -1.3379406490494445 0.385948223961469 1.0 ['ENST00000389131.7_1_8:23155097-23155310:-|nuORF'] 102235 10756 SPSTGRDIFT True NCI_RA007_Epitope_Rep5 1079.5247379360299 1079.52364993586 48.011 2 -1.3379748936387161 0.385948223961469 1.0 ['ENST00000413628.5_1_1:68568378-68586877:+|nuORF'] 22958 7022 EVHWFSIMYSF True PC9_epitope_Rep2 1444.6485585501598 1444.64692490379 32.413 3 -1.3380402942227807 0.38596765842674985 1.0 ['ENST00000258439.7_1_2:96918849-96919380:-|nuORF'] 46361 15923 ITHERYLLLPF True PC9_epitope_Rep4 1400.7816213250396 1400.7799649037902 69.175 3 -1.3381669551718482 0.38597209347122063 1.0 ['ENST00000462410.5_1_1:211526581-211529879:+|nuORF'] 90076 19701 RGPGRTIRF True NCI_RA007_Epitope_Rep4 1058.6097454030198 1058.60864993586 85.139 2 -1.3381670107637345 0.38597209347122063 1.0 ['ENSG00000137103|ENST00000643932|TMEM8B'] 126423 13440 VPLLLTLI True PC9_epitope_Rep4 880.5997407996 880.59864993586 59.596 2 -1.3382082611812303 0.38597209347122063 1.0 ['ENST00000251343.9_1_14:24906506-24906650:+|nuORF'] 58070 8056 LERPSAPGL True PC9_epitope_Rep1 938.5185303567798 938.51742993586 35.809 2 -1.3382147207624748 0.38597209347122063 1.0 ['TAF2|p.T1070A|1|0.08|ENSG00000064313|chr8:119744294-119744294|T/C|missense_variant'] 129916 14964 VTLTSIVP True PC9_epitope_Rep4 828.49566965388 828.49456993586 65.497 2 -1.338232945004717 0.38597209347122063 1.0 ['ENSG00000165912|ENST00000298838|PACSIN3'] 85165 14149 QKAALNVRDNV True NCI_RA007_Epitope_Rep1 1226.67313350522 1226.67202993586 59.069 2 -1.3382680720271813 0.38597209347122063 1.0 ['ENSG00000101457|ENST00000372622|DNTTIP1'] 42472 5075 IEQSNSYWRET True NCI_RA007_Epitope_Rep1 1411.6368075661499 1411.6351649037902 23.825 3 -1.3382969576226234 0.38597209347122063 1.0 ['ENSG00000118620|ENST00000261560|ZNF430'] 134875 16162 YACCFEWVI True PC9_epitope_Rep5 1132.4721744113199 1132.47052490379 67.156 3 -1.3383243042443256 0.38597209347122063 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant'] 71869 16408 MPMYFFLRNLS True PC9_epitope_Rep3 1417.6886495403298 1417.68754993586 68.251 2 -1.3383598345883478 0.38597209347122063 1.0 ['ENSG00000177174|ENST00000317861|OR14C36', 'OR14C36|p.F105Lfs*28|2|0.22|ENSG00000177174|chr1:248349082-248349082|T/-|frameshift_variant'] 49225 25148 KGRFLLLM True PC9_epitope_Rep2 976.5891931992398 976.58808993586 102.4 2 -1.3383677397748854 0.38597209347122063 1.0 ['ENST00000567744.5_1_15:65891231-65891273:-|nuORF'] 44589 4648 IPGKIPLIMIK True H1975_Epitope_Rep1 1221.7882869286098 1221.7866449037901 22.913 3 -1.3383711356134298 0.38597209347122063 1.0 ['ENST00000510832.5_1_4:189458328-189458415:+|nuORF'] 22712 5346 ETWDWFSWLFL True H1975_Epitope_Rep1 1528.7027022979998 1528.70104490379 25.623 3 -1.3383794469691674 0.38597209347122063 1.0 ['ENSG00000026508|ENST00000428726|CD44', 'nc|ENSG00000026508|P16070-9|CD44', 'nc|ENSG00000026508|P16070-5|CD44', 'nc|ENSG00000026508|P16070-7|CD44', 'nc|ENSG00000026508|P16070-3|CD44', 'nc|ENSG00000026508|P16070-6|CD44', 'nc|ENSG00000026508|P16070-16|CD44', 'nc|ENSG00000026508|P16070-17|CD44', 'nc|ENSG00000026508|P16070-8|CD44'] 90890 19860 RLAWPLRLGP True H1975_Epitope_Rep3 1177.7083968151298 1177.7072899358602 83.149 2 -1.3384414169802497 0.3859794856977752 1.0 ['ENSG00000063515|ENST00000086933|GSC2'] 116094 12357 TVSHKFRR True PC9_epitope_Rep3 1029.5831963020098 1029.58208993586 52.559 2 -1.3385746702382482 0.3860424240965016 1.0 ['AP4E1|p.S797T|1|0.17|ENSG00000081014|chr15:50997368-50997368|T/A|missense_variant', 'nc|ENSG00000081014|Q9UPM8-2|AP4E1', 'ENSG00000081014|ENST00000261842|AP4E1'] 123264 18372 VHQAKLKEVR True NCI_RA007_Epitope_Rep3 1206.71968977482 1206.7180349037899 80.453 3 -1.3385822877115163 0.3860424240965016 1.0 ['nc|ENSG00000164051|Q96ER9-2|CCDC51', 'ENSG00000164051|ENST00000395694|CCDC51'] 97413 8859 SGFTEDQTRR True H1975_Epitope_Rep2 1195.55816332263 1195.55706993586 39.043 2 -1.3386274434152965 0.3860498152094093 1.0 ['ENSG00000184305|ENST00000509176|CCSER1', 'nc|ENSG00000184305|Q9C0I3-2|CCSER1'] 2968 21767 AFIIFWVRSKR True PC9_epitope_Rep6 1421.82957457697 1421.82793490379 96.62 3 -1.3386695883072812 0.3860692444744065 1.0 ['nc|ENSG00000178562|P10747-2|CD28', 'nc|ENSG00000178562|P10747-4|CD28', 'nc|ENSG00000178562|P10747-3|CD28', 'ENSG00000178562|ENST00000324106|CD28', 'nc|ENSG00000178562|P10747-7|CD28'] 66487 10504 LSRVRVLGL True PC9_epitope_Rep4 1011.6552986131098 1011.65420993586 48.126 2 -1.3388076996722251 0.3861007114567408 1.0 ['ITGAX|p.A1025Cfs*9|1|0.25|ENSG00000140678|chr16:31380275-31380276|-/T|frameshift_variant', 'ENSG00000140678|ENST00000268296|ITGAX', 'ENST00000571644.1_1_16:31374636-31388147:+|nuORF'] 20901 7308 EQSTGPIK True PC9_epitope_Rep1 858.44469671018 858.44358993586 32.923 2 -1.3389495754676504 0.38613217768147345 1.0 ['nc|ENSG00000133858|O60293-2|ZFC3H1', 'ENSG00000133858|ENST00000378743|ZFC3H1'] 80460 17206 PLKVSDYS True PC9_epitope_Rep4 907.46509780159 907.46400993586 74.188 2 -1.3389859871703462 0.3861395673580431 1.0 ['ENST00000534568.1_1_11:64813497-64813763:-|nuORF', 'ENST00000532450.5_1_11:64812392-64813763:-|nuORF', 'ENST00000531174.1_1_11:64813610-64815186:-|nuORF', 'nc|ENSG00000168060|Q9UQQ1-8|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-2|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-3|NAALADL1', 'ENSG00000168060|ENST00000358658|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-4|NAALADL1'] 19843 13078 ELVELSTALEH True NCI_RA007_Epitope_Rep1 1239.63468230783 1239.63358993586 54.863 2 -1.3390365453503414 0.38614695685670264 1.0 ['ENSG00000108561|ENST00000225698|C1QBP'] 62669 6865 LLWEAESSW True H1975_Epitope_Rep1 1119.52367530687 1119.52256993586 31.45 2 -1.3391836556341212 0.38616256815801825 1.0 ['ENSG00000156574|ENST00000287139|NODAL'] 8648 14774 AVAQFKKY True PC9_epitope_Rep5 953.5334521449299 953.53234993586 61.828 2 -1.339186186075711 0.38616256815801825 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 83977 14019 QELQITDRI True PC9_epitope_Rep2 1114.59823722946 1114.5971499358602 59.2 2 -1.3392074815776913 0.38616256815801825 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant', 'TTN|p.G4069Rfs*32|1|0.18|ENSG00000155657|chr2:178740077-178740078|-/T|frameshift_variant', 'TTN|p.A3783Pfs*4|1|0.23|ENSG00000155657|chr2:178740936-178740936|T/-|frameshift_variant', 'TTN|p.L3297Cfs*2|1|0.37|ENSG00000155657|chr2:178764625-178764625|A/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-6|TTN'] 20350 20071 EPGPPKPGV True PC9_epitope_Rep1 876.4705175352 876.46942993586 82.03 2 -1.339210767542623 0.38616256815801825 1.0 ['ENSG00000125826|ENST00000356286|RBCK1', 'RBCK1|p.P178L|1|0.19|ENSG00000125826|chr20:419419-419419|C/T|missense_variant', 'nc|ENSG00000125826|Q9BYM8-4|RBCK1', 'ENST00000382181.2_2_20:389382-402830:+|nuORF', 'nc|ENSG00000125826|Q9BYM8-3|RBCK1'] 62267 13790 LLQKEEKDREK True H1975_Epitope_Rep1 1414.7779924965796 1414.77688993586 58.186 2 -1.3392186788798943 0.38616256815801825 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 128269 8348 VSALKGLPG True PC9_epitope_Rep2 840.5069030439199 840.50580993586 37.481 2 -1.3392386869084367 0.38616256815801825 1.0 ['ENST00000369827.7_1_1:110217734-110217830:+|nuORF'] 125650 25054 VMLFLHGG True PC9_epitope_Rep4 872.4578446765199 872.45674993586 104.93 2 -1.3392481676091499 0.38616256815801825 1.0 ['ENSG00000169992|ENST00000302926|NLGN2'] 93585 19655 RSTNIKKA True NCI_RA007_Epitope_Rep2 916.5454138109599 916.54430993586 81.403 2 -1.3393298713967876 0.38619402985074625 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 58966 6397 LFYRHYLFYKE True NCI_RA007_Epitope_Rep5 1577.80308504561 1577.80144490379 31.277 3 -1.339506657068692 0.3862328783611372 1.0 ['ENSG00000111684|ENST00000261407|LPCAT3', 'LRRC23-LPCAT3|1|fusion', 'LPCAT3|p.L184Sfs*32|1|0.25|ENSG00000111684|chr12:6981125-6981132|CCAGCAGG/-|frameshift_variant'] 64457 19471 LQSYTQLNFRP True H1975_Epitope_Rep1 1365.70409928033 1365.70300993586 81.086 2 -1.339589565231833 0.3862328783611372 1.0 ['nc|ENSG00000163378|Q5NDL2-3|EOGT', 'ENSG00000163378|ENST00000383701|EOGT'] 48342 4461 KDVQQYILHRL True H1975_Epitope_Rep3 1411.7935829910698 1411.79194490379 22.279 3 -1.3396353782993695 0.3862383554389428 1.0 ['nc|ENSG00000151458|Q9ULJ7-2|ANKRD50', 'ENSG00000151458|ENST00000504087|ANKRD50'] 29776 8086 FVSLYRGP True NCI_RA007_Epitope_Rep2 937.5021520166499 937.50104993586 36.085 2 -1.339643300941079 0.3862383554389428 1.0 ['nc|ENSG00000102531|Q9Y2H6-2|FNDC3A', 'ENSG00000102531|ENST00000492622|FNDC3A'] 88635 10978 RARMQQQL True PC9_epitope_Rep6 1029.55018192157 1029.5490899358601 53.119 2 -1.3396810494856284 0.3862383554389428 1.0 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA', 'ENST00000368298.2_1_1:156104977-156106341:+|nuORF', 'ENST00000496738.5_1_1:156104620-156106879:+|nuORF'] 6156 8625 APPGELVSYPY True PC9_epitope_Rep4 1191.58119018299 1191.57955490379 40.658 3 -1.3396856585993377 0.3862383554389428 1.0 ['ENST00000393800.6_2_11:68228258-68287015:+|nuORF'] 23113 12423 EVLSWSQNFD True NCI_RA007_Epitope_Rep5 1223.54586730343 1223.5447699358601 54.443 2 -1.3398340811248086 0.3862938847232419 1.0 ['ENSG00000091844|ENST00000206262|RGS17'] 62386 10489 LLRRLWWEDCW True NCI_RA007_Epitope_Rep3 1574.7816384083796 1574.78054993586 48.318 2 -1.3399307734301658 0.38631330637396494 1.0 ['AluJr4_dup4313|chr3:128811130-128811275:-|1.1423359140543188|0.0007489705087858|10.57|502.0|1|1|sense'] 84302 17102 QFDFKAKKYRK True H1975_Epitope_Rep1 1457.8143184356497 1457.8132299358601 71.21 2 -1.3399721113664913 0.38632807798772417 1.0 ['ENSG00000068383|ENST00000368594|INPP5A'] 108867 5893 TERLFLDHP True H1975_Epitope_Rep3 1126.5771078620598 1126.5760099358602 27.677 2 -1.339976986074379 0.38632807798772417 1.0 ['ENSG00000089154|ENST00000300648|GCN1', 'GCN1L1-CCND2|1|fusion'] 136054 9515 YFTLLRHLLNY True H1975_Epitope_Rep3 1451.7925203619097 1451.7914299358602 41.605 2 -1.3400563931026643 0.38635488374332067 1.0 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant', 'nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'ENSG00000114374|ENST00000338981|USP9Y'] 20095 15118 ENIILYLRI True PC9_epitope_Rep2 1145.68084465461 1145.6791949037902 63.409 3 -1.3400602945942446 0.38635488374332067 1.0 ['ENST00000295025.12_1_2:61149778-61149811:+|nuORF'] 94237 25651 RWRKALRGK True PC9_epitope_Rep1 1169.7257782147697 1169.7246899358602 103.7 2 -1.3401116497115177 0.38636226878317065 1.0 ['ENSG00000168159|ENST00000305943|RNF187'] 136036 10475 YFRIRFYFRNW True H1975_Epitope_Rep1 1666.8521009266997 1666.85100993586 45.247 2 -1.3401233065596803 0.3863696536452692 1.0 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 41190 7111 IAAENNAP True NCI_RA007_Epitope_Rep2 798.3871818340599 798.38663496793 32.28 1 -1.3402438416853188 0.3864131415849329 1.0 ['ENST00000427230.2_1_7:29252086-29252344:+|nuORF'] 127449 14835 VQSLNQTYK True PC9_epitope_Rep5 1079.56112344475 1079.56002993586 62.065 2 -1.34033319300452 0.3864352932681894 1.0 ['ADGRF5|p.W968Gfs*8|1|0.1|ENSG00000069122|chr6:46859002-46859002|C/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-2|ADGRF5', 'ENSG00000069122|ENST00000283296|ADGRF5', 'ADGRF5|p.D355Tfs*11|1|0.2|ENSG00000069122|chr6:46878380-46878380|T/-|frameshift_variant', 'nc|ENSG00000069122|Q8IZF2-3|ADGRF5'] 44555 8474 IPCYTLDGD True PC9_epitope_Rep5 995.4269980407099 995.42590993586 37.538 2 -1.3403967301113373 0.3864352932681894 1.0 ['ENSG00000138801|ENST00000265174|PAPSS1'] 71168 11396 MFCSYDFWNP True PC9_epitope_Rep5 1308.4943664078796 1308.49326993586 48.832 2 -1.340434502872536 0.3864352932681894 1.0 ['ENST00000264963.8_2_2:97371867-97372074:-|nuORF'] 99374 7494 SLDWRMGW True H1975_Epitope_Rep1 1049.47528564581 1049.47418993586 33.822 2 -1.3405439446136664 0.3864426768071818 1.0 ['ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L', 'nc|ENSG00000101331|Q9NUG4-3|CCM2L'] 80522 17269 PLLPALSA True NCI_RA007_Epitope_Rep5 780.4745402864801 780.47344993586 73.198 2 -1.3405508519043619 0.3864500601684717 1.0 ['ENST00000550147.5_1_12:53899948-53900041:+|nuORF'] 27534 23478 FPGYPIHV True NCI_RA007_Epitope_Rep3 928.4806882960798 928.47958993586 101.89 2 -1.340709632517685 0.38651104025028576 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L', 'STON1-GTF2A1L|p.P824Q|1|0.61|ENSG00000068781|chr2:48645088-48645088|C/A|missense_variant', 'STON1-GTF2A1L|p.P824L|1|0.33|ENSG00000068781|chr2:48645088-48645088|C/T|missense_variant', 'STON1-GTF2A1L|p.G826V|1|0.3|ENSG00000068781|chr2:48645094-48645094|G/T|missense_variant', 'STON1-GTF2A1L|p.A825T|1|0.12|ENSG00000068781|chr2:48645090-48645090|G/A|missense_variant'] 11902 6056 DHRQHEDP True H1975_Epitope_Rep2 1032.4373199139598 1032.4362299358602 28.272 2 -1.3407678765044013 0.38651104025028576 1.0 ['ENST00000552495.1_2_12:113623643-113624655:+|nuORF'] 117479 7334 VAEEELLNMLP True NCI_RA007_Epitope_Rep1 1256.6322397796798 1256.63114993586 32.521 2 -1.3408129123609536 0.38651104025028576 1.0 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 66364 7516 LSQVPHYGWEM True PC9_epitope_Rep1 1345.6125073946098 1345.6114099358601 33.728 2 -1.3408205428972677 0.38651104025028576 1.0 ['FRMPD4|p.P36H|1|0.39|ENSG00000169933|chrX:12498745-12498745|C/A|missense_variant'] 37101 23348 GVSPRLRLP True H1975_Epitope_Rep1 993.6083484206899 993.60724993586 97.046 2 -1.3408260832114456 0.38651104025028576 1.0 ['ENSG00000140323|ENST00000267889|DISP2'] 78905 23024 PEVWILSPL True PC9_epitope_Rep1 1052.5906326678798 1052.5895299358601 93.36 2 -1.3408494457815983 0.38651842225591415 1.0 ['ENST00000519579.1_X:52238938-52240854:+|nuORF'] 38987 15507 HKDSKWYQQWK True NCI_RA007_Epitope_Rep2 1532.75244645508 1532.7513499358602 65.024 2 -1.3409005103328533 0.38652115319824804 1.0 ['ENSG00000104980|ENST00000270538|TIMM44', 'ENST00000598675.1_1_19:7997268-7998765:-|nuORF'] 45953 6657 ISSMLGRMANP True PC9_epitope_Rep1 1175.57909909135 1175.57800993586 30.411 2 -1.340930522853925 0.38652115319824804 1.0 ['ENSG00000161267|ENST00000392379|BDH1'] 126196 14526 VPGKVVPL True PC9_epitope_Rep5 807.5218248320699 807.52072993586 60.872 2 -1.3409424626664688 0.3865285348157239 1.0 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 115776 22260 TVLTEEVF True PC9_epitope_Rep1 936.48041351256 936.47930993586 90.44 2 -1.3410288944690762 0.3865506786023679 1.0 ['nc|ENSG00000258659|Q9BYJ4-2|TRIM34', 'ENST00000491385.1_1_11:5653561-5662456:+|nuORF', 'ENSG00000258659|ENST00000429814|TRIM34'] 96426 18841 SEIEILAVDLP True PC9_epitope_Rep5 1197.6492697428098 1197.64816993586 77.489 2 -1.3410310868220403 0.3865506786023679 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 82603 22021 PVKKGVPM True PC9_epitope_Rep1 854.5047948689399 854.50368993586 89.524 2 -1.3410363870926334 0.3865506786023679 1.0 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000061794|P82673-2|MRPS35', 'ENSG00000061794|ENST00000081029|MRPS35', 'MRPS35-PPFIBP1|3|fusion'] 8645 14318 AVAQFKKY True PC9_epitope_Rep2 953.5334521449299 953.53234993586 60.338 2 -1.3411345645973511 0.3865700913214539 1.0 ['nc|ENSG00000168538|Q7Z392-4|TRAPPC11', 'nc|ENSG00000168538|Q7Z392-3|TRAPPC11', 'ENSG00000168538|ENST00000334690|TRAPPC11'] 79166 7063 PGDPVFPF True PC9_epitope_Rep6 874.4225047136199 874.42140993586 36.192 2 -1.3412165732123753 0.38657747190605674 1.0 ['ENST00000396359.1_1_8:82193222-82195661:+|nuORF'] 133937 4206 WPCPDRHLREK True NCI_RA007_Epitope_Rep1 1435.7142871245499 1435.71265490379 20.461 3 -1.3413450345245508 0.38661902355687094 1.0 ['nc|ENSG00000052795|Q9P278-2|FNIP2', 'ENSG00000052795|ENST00000264433|FNIP2'] 105316 5378 STVADRGAL True PC9_epitope_Rep4 888.4664947839199 888.46538993586 27.413 2 -1.3413555117188307 0.38661902355687094 1.0 ['CECR2|p.E1074Gfs*15|1|0.14|ENSG00000099954|chr22:17548448-17548461|AGAACGGAGTCATT/-|frameshift_variant', 'ENSG00000099954|ENST00000262608|CECR2', 'nc|ENSG00000099954|Q9BXF3|CECR2'] 55627 17903 LDAASGRLYL True PC9_epitope_Rep5 1077.5818588893299 1077.5807699358602 73.881 2 -1.3413830560193547 0.38661902355687094 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 34073 16324 GNTLTSLK True H1975_Epitope_Rep3 832.46543215476 832.46432993586 68.265 2 -1.341418872731052 0.38661902355687094 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 81808 4565 PSFPKWARQY True H1975_Epitope_Rep2 1278.6509415086598 1278.6493049037902 22.665 3 -1.3415090017527718 0.38663843405238274 1.0 ['CDK2|p.D247Y|1|0.03|ENSG00000123374|chr12:55971194-55971194|G/T|missense_variant'] 90987 23626 RLILTPATF True PC9_epitope_Rep3 1030.61751612206 1030.61640993586 96.165 2 -1.3416637028458944 0.3866939364773821 1.0 ['ENSG00000203972|ENST00000371197|GLYATL3'] 71503 4922 MKMLRDELDLR True NCI_RA007_Epitope_Rep2 1418.7373906378998 1418.73574490379 23.765 3 -1.3417431922845677 0.3867133456046005 1.0 ['nc|ENSG00000141013|O95995-2|GAS8', 'ENSG00000141013|ENST00000268699|GAS8', 'ENST00000540721.5_1_16:90089090-90108732:+|nuORF', 'ENST00000565062.5_1_16:90097706-90103159:+|nuORF'] 90474 20149 RIVTTYIRER True PC9_epitope_Rep5 1305.7517181790897 1305.7500749037902 82.55 3 -1.3418764880746405 0.38673275426481557 1.0 ['nc|ENSG00000079805|P50570-3|DNM2', 'ENSG00000079805|ENST00000389253|DNM2', 'nc|ENSG00000079805|P50570|DNM2', 'nc|ENSG00000079805|P50570-5|DNM2', 'nc|ENSG00000079805|P50570-2|DNM2', 'NFIX-DNM2|4|fusion', 'NFIX-DNM2|2|fusion', 'NFIX-DNM2|3|fusion', 'NFIX-DNM2|1|fusion', 'NFIX-DNM2|5|fusion', 'ENST00000587329.1_1_19:10909095-10913035:+|nuORF'] 105633 7960 SVFFFFFFFFW True H1975_Epitope_Rep1 1566.7376312547394 1566.73597490379 35.567 3 -1.3419252126674848 0.38674013209340374 1.0 ['ENST00000241416.11_1_2:148602472-148602628:+|nuORF'] 808 5655 ADAEAWYQT True H1975_Epitope_Rep2 1053.4403396057298 1053.43924993586 26.749 2 -1.3419635945421606 0.38674750974447814 1.0 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0'] 59449 9176 LGMWCSPRGTW True NCI_RA007_Epitope_Rep1 1292.5794334445197 1292.5783299358602 39.693 2 -1.3420986741152 0.386790977443609 1.0 ['ENST00000290354.5_1_21:37507578-37507656:+|nuORF'] 122722 9138 VGVAELTE True NCI_RA007_Epitope_Rep4 816.42289863644 816.42180993586 41.989 2 -1.3421406955640987 0.3867983543055121 1.0 ['ENST00000478771.2_1_7:150037434-150037698:-|nuORF', 'ENSG00000106538|ENST00000223271|RARRES2'] 36886 20664 GVQNITAA True PC9_epitope_Rep6 772.40791727864 772.4073649679301 92.238 1 -1.3422276808078255 0.3868297905614301 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 100460 8066 SLPGRSVPPP True H1975_Epitope_Rep3 1005.5607295219298 1005.55962993586 35.999 2 -1.3422567852924838 0.3868686018116421 1.0 ['SYNPO2|p.I1101Ffs*22|2|0.25|ENSG00000172403|chr4:119057443-119057443|C/-|frameshift_variant', 'nc|ENSG00000172403|Q9UMS6-4|SYNPO2', 'ENSG00000172403|ENST00000307142|SYNPO2', 'MSI2-SYNPO2|1|fusion', 'MSI2-SYNPO2|4|fusion'] 67011 10999 LTALGLNLV True PC9_epitope_Rep1 912.56441792004 912.56332993586 47.196 2 -1.3423233977617253 0.3868686018116421 1.0 ['nc|ENSG00000138363|P31939-2|ATIC', 'ENSG00000138363|ENST00000236959|ATIC', 'ENST00000443953.5_1_2:216177073-216214375:+|nuORF', 'ENST00000427397.5_1_2:216176945-216197107:+|nuORF', 'ENST00000488712.5_1_2:216176805-216189903:+|nuORF', 'ENST00000413174.1_3_2:216177270-216182893:+|nuORF'] 68294 20585 LTRNLTAYRK True NCI_RA007_Epitope_Rep4 1234.71460439438 1234.71295490379 89.157 3 -1.3424454633240217 0.3869120654396728 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 13050 20035 DLREGRWRGEV True H1975_Epitope_Rep3 1371.70074523539 1371.6996499358602 83.854 2 -1.342534264219138 0.38693146960820873 1.0 ['ENST00000216968.4_1_20:33764702-33764822:+|nuORF'] 36892 22282 GVQPTRRRQ True PC9_epitope_Rep4 1096.62137271588 1096.62077496793 93.946 1 -1.342687768593217 0.386985024357972 1.0 ['ENST00000531072.1_1_11:64808545-64809015:+|nuORF'] 137481 17400 YLPGGRARIT True NCI_RA007_Epitope_Rep4 1102.6247267608198 1102.62417496793 75.345 1 -1.34274958623902 0.386985024357972 1.0 ['ENST00000234296.6_1_2:201822845-201828374:-|nuORF'] 53979 23931 KYKWYLKKLVF True PC9_epitope_Rep2 1514.9013425348996 1514.90024993586 97.53 2 -1.3427530019837024 0.386985024357972 1.0 ['ENSG00000174992|ENST00000400752|ZG16'] 75016 17861 NMAKAKMKNK True NCI_RA007_Epitope_Rep3 1162.63146901738 1162.62982490379 78.298 3 -1.342760967074851 0.386985024357972 1.0 ['nc|ENSG00000128989|P56211-2|ARPP19', 'ENSG00000128989|ENST00000249822|ARPP19', 'nc|ENSG00000143420|O43768-6|ENSA', 'nc|ENSG00000143420|O43768-5|ENSA', 'nc|ENSG00000143420|O43768-2|ENSA', 'ENSG00000143420|ENST00000369014|ENSA', 'nc|ENSG00000143420|O43768-9|ENSA', 'nc|ENSG00000143420|O43768-7|ENSA', 'nc|ENSG00000143420|O43768-3|ENSA', 'nc|ENSG00000143420|O43768-4|ENSA', 'ENST00000565288.1_1_15:52844133-52849247:-|nuORF'] 76692 20343 NTLQKHTRC True PC9_epitope_Rep5 1099.5556612248301 1099.5545699358602 83.284 2 -1.3428958733404777 0.38701179980032957 1.0 ['ZNF581|p.W194C|1|0.15|ENSG00000171425|chr19:55645153-55645153|G/C|missense_variant'] 64450 18554 LQSMKHCQV True PC9_epitope_Rep2 1072.5157705588 1072.5146699358602 76.718 2 -1.3429089888169292 0.38701179980032957 1.0 ['ENSG00000132510|ENST00000448097|KDM6B', 'nc|ENSG00000132510|O15054-1|KDM6B'] 54939 9063 LAGWLWISFLY True H1975_Epitope_Rep3 1367.72779484703 1367.7266899358601 39.847 2 -1.3429825658817436 0.38703391869136394 1.0 ['nc|ENSG00000158296|Q8WWT9-3|SLC13A3', 'nc|ENSG00000158296|Q8WWT9-6|SLC13A3', 'ENSG00000158296|ENST00000279027|SLC13A3'] 65962 5583 LSLQESGPLES True NCI_RA007_Epitope_Rep2 1158.5768330785397 1158.5757299358602 26.332 2 -1.3431251596728464 0.38703391869136394 1.0 ['ENST00000429283.2_1_2:233199223-233199517:+|nuORF'] 78846 14554 PERLVPVSP True PC9_epitope_Rep2 992.5654805492 992.56438993586 61.253 2 -1.3431334557101131 0.38703391869136394 1.0 ['ENSG00000124217|ENST00000244051|MOCS3'] 103501 12711 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 55.557 2 -1.3431819749189748 0.3870440085154493 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 64129 7611 LQEKLGEEHLE True NCI_RA007_Epitope_Rep1 1323.6670450652698 1323.66538490379 33.597 3 -1.343193014468707 0.3870440085154493 1.0 ['nc|ENSG00000291004|A6NC78|GOLGA8IP', 'ENSG00000179938|ENST00000567927|GOLGA8J', 'ENSG00000188626|ENST00000563027|GOLGA8M', 'ENSG00000232653|ENST00000448387|GOLGA8N', 'ENSG00000206127|ENST00000509311|GOLGA8O', 'ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261247|ENST00000569052|GOLGA8T', 'ENSG00000261794|ENST00000566740|GOLGA8H'] 121233 12165 VGGQPHPP True PC9_epitope_Rep1 787.3976869481099 787.39658993586 51.656 2 -1.3432144829528303 0.3870440085154493 1.0 ['ENST00000478619.1_1_3:50374443-50374560:-|nuORF'] 46862 12087 IVGFVPRK True PC9_epitope_Rep5 914.5701720068199 914.5690699358599 51.487 2 -1.3433026349995236 0.3870587527812857 1.0 ['ENSG00000162694|ENST00000370114|EXTL2'] 130983 16411 VVKLRKISDW True NCI_RA007_Epitope_Rep3 1242.7448418935 1242.74320490379 72.288 3 -1.3433110465945786 0.3870587527812857 1.0 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'nc|ENSG00000146414|Q149N8-2|SHPRH', 'ENST00000433355.6_1_6:146231577-146267398:-|nuORF', 'SHPRH|p.R1289Lfs*8|1|0.16|ENSG00000146414|chr6:145921309-145921310|-/A|frameshift_variant'] 31024 14510 GAVGEVLRQI True PC9_epitope_Rep3 1040.5978433066398 1040.59674993586 60.934 2 -1.3433759845064497 0.3870781516849878 1.0 ['ENSG00000066739|ENST00000359933|ATG2B'] 130829 22734 VVFPGLFLL True PC9_epitope_Rep1 1003.6106398364699 1003.60954993586 92.251 2 -1.3434170839481787 0.387097550122073 1.0 ['ENSG00000149926|ENST00000380495|TLCD3B'] 62309 19224 LLQTCTPPPF True PC9_epitope_Rep2 1115.5685173243098 1115.56740993586 79.317 2 -1.3434544408967677 0.3871103521262267 1.0 ['ENST00000342665.4_2_20:307553-308057:+|nuORF'] 110783 23520 TKPGRSRFRRT True PC9_epitope_Rep3 1360.7799986155997 1360.7789099358602 95.75 2 -1.3434744887529602 0.3871103521262267 1.0 ['ENST00000450873.6_2_7:66236917-66240338:+|nuORF'] 129877 14487 VTLRGSPDWE True PC9_epitope_Rep2 1158.5669371011797 1158.5658499358601 60.994 2 -1.3435063145577366 0.3871103521262267 1.0 ['nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC'] 36614 20305 GVLLAKMKHP True H1975_Epitope_Rep2 1092.6477707045199 1092.64666993586 84.144 2 -1.3435194084417859 0.3871103521262267 1.0 ['NEK3|p.A51G|2|0.26|ENSG00000136098|chr13:52154139-52154139|G/C|missense_variant'] 9172 6583 AVNQQQEVLLQ True NCI_RA007_Epitope_Rep5 1268.67246479888 1268.6713699358602 31.982 2 -1.3435331318053199 0.3871103521262267 1.0 ['ENSG00000155761|ENST00000336338|SPAG17'] 94169 19250 RWLEKEERFLK True PC9_epitope_Rep2 1532.8463468399198 1532.84470490379 79.418 3 -1.3435826534883148 0.38711772275203543 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 55641 10481 LDAFAQEM True PC9_epitope_Rep5 923.40586867331 923.40476993586 45.302 2 -1.3438641863820964 0.38712509320056765 1.0 ['ENST00000440593.3_1_19:13255325-13260573:-|nuORF', 'ENSG00000104915|ENST00000587230|STX10', 'ENST00000591843.1_1_19:13255226-13260604:-|nuORF', 'nc|ENSG00000104915|O60499-2|STX10'] 53682 26120 KYAFFASD True H1975_Epitope_Rep3 947.4388830537499 947.43833496793 108.83 1 -1.3440083022056584 0.38718056641212195 1.0 ['PLCL2|p.E512D|1|0.16|ENSG00000154822|chr3:17010882-17010882|G/T|missense_variant'] 61779 17848 LLKKESQNL True PC9_epitope_Rep4 1071.62880908175 1071.6277099358601 76.689 2 -1.3440170260200113 0.38719530526594276 1.0 ['ENSG00000164744|ENST00000297325|SUN3', 'SUN3|p.E117K|1|0.28|ENSG00000164744|chr7:48007308-48007308|C/T|missense_variant', 'nc|ENSG00000164744|Q8TAQ9-2|SUN3', 'nc|ENSG00000164744|Q8TAQ9-3|SUN3'] 116246 21651 TVVALRSQTA True PC9_epitope_Rep1 1044.5927579262 1044.5916699358602 88.109 2 -1.344037479320301 0.38719530526594276 1.0 ['nc|ENSG00000155100|Q8N6M0-2|OTUD6B', 'ENSG00000155100|ENST00000404789|OTUD6B'] 201 7714 AAFFQSVGNF True NCI_RA007_Epitope_Rep4 1086.5134449763398 1086.5123499358601 36.344 2 -1.3442128011032393 0.3872581440373261 1.0 ['ENSG00000181804|ENST00000316549|SLC9A9'] 122637 15287 VGTNGGLK True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 65.496 1 -1.3442249670986464 0.3872581440373261 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 22031 11690 ESQQRIRMMKE True NCI_RA007_Epitope_Rep2 1434.7071531387799 1434.7060499358602 50.065 2 -1.3442788584147165 0.3872895622895623 1.0 ['NEIL3|p.R295Kfs*4|1|0.36|ENSG00000109674|chr4:177351392-177351394|TAG/AA|frameshift_variant', 'ENSG00000109674|ENST00000264596|NEIL3', 'ENST00000513321.1_1_4:178231246-178274506:+|nuORF'] 128879 6187 VSTAARAY True PC9_epitope_Rep6 837.4344663796498 837.43336993586 32.252 2 -1.3443627432716347 0.38730895491877204 1.0 ['ENSG00000275489|ENST00000614158|C17orf98'] 36239 13332 GVGFESKP True NCI_RA007_Epitope_Rep2 819.4126683059098 819.41211496793 56.497 1 -1.344460335457043 0.38732834708159974 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 80629 11801 PLPLPCSVH True PC9_epitope_Rep4 961.5055231449301 961.50442993586 53.16 2 -1.3444799308577404 0.38733571419982443 1.0 ['ENST00000463188.5_1_2:219529923-219536693:-|nuORF', 'ENST00000295704.6_1_2:219529923-219530909:-|nuORF'] 125819 21596 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 90.156 2 -1.3445600923191605 0.387336475567526 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 34053 16384 GNQRGHKQMEK True NCI_RA007_Epitope_Rep2 1311.6466014875498 1311.6455099358602 68.455 2 -1.3445682648503452 0.387336475567526 1.0 ['nc|ENSG00000172954|Q6UWP7-2|LCLAT1'] 27417 25101 FNFMLLPCLK True PC9_epitope_Rep5 1224.6399084427596 1224.63826490379 101.69 3 -1.3446112877348575 0.387336475567526 1.0 ['ENST00000513761.5_1_4:170541930-170542083:+|nuORF'] 110153 8193 TIDDKVGAA True NCI_RA007_Epitope_Rep1 888.4552613938798 888.45416993586 35.867 2 -1.3446314663083816 0.387336475567526 1.0 ['ENSG00000182934|ENST00000332118|SRPRA', 'nc|ENSG00000182934|P08240-2|SRPRA'] 120209 11830 VFLVSVPAAP True H1975_Epitope_Rep1 998.5800679841798 998.57896993586 50.5 2 -1.3446447379527222 0.387336475567526 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 13694 8858 DQFYHWHYRIL True PC9_epitope_Rep3 1576.75753183552 1576.75588490379 39.023 3 -1.344673648691766 0.3873512083684021 1.0 ['ENST00000527958.5_1_11:117038415-117038544:+|nuORF'] 83070 9616 PYLSKLGFEIV True NCI_RA007_Epitope_Rep4 1264.70672504928 1264.70562993586 43.838 2 -1.3446879743835076 0.3873512083684021 1.0 ['ENSG00000136381|ENST00000258886|IREB2', 'ENST00000559676.1_1_15:78777183-78780743:+|nuORF'] 79317 19147 PGKLTGLRRR True H1975_Epitope_Rep2 1152.7203584811598 1152.7192699358602 79.473 2 -1.3447240006232382 0.3873585745031321 1.0 ['ENST00000479212.5_1_3:113627916-113664322:+|nuORF', 'nc|ENSG00000178075|Q8IYS0-2|GRAMD1C', 'ENSG00000178075|ENST00000358160|GRAMD1C', 'ENST00000471031.1_1_3:113653357-113655330:+|nuORF'] 71595 22777 MLISKLEKNKN True PC9_epitope_Rep4 1316.7486069445997 1316.74750993586 95.833 2 -1.344985563126544 0.38737796373779637 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 68904 18269 LVESFWKAK True PC9_epitope_Rep2 1106.6124307416198 1106.61132993586 75.593 2 -1.3450612261091321 0.387397352506222 1.0 ['ENST00000429033.1_1_21:32434669-32435362:-|nuORF'] 112071 15141 TLTKEKVPLER True H1975_Epitope_Rep1 1312.7714505641597 1312.7703499358602 63.497 2 -1.3451219111751775 0.38740471782047275 1.0 ['ENSG00000003509|ENST00000002125|NDUFAF7', 'ENST00000474154.5_1_2:37458848-37468954:+|nuORF'] 68250 10614 LTRDETNYGIP True PC9_epitope_Rep2 1277.62518025329 1277.6240899358602 46.141 2 -1.3451655434440424 0.38741013248695566 1.0 ['ENSG00000204628|ENST00000512805|RACK1', 'ENST00000514183.5_1_5:180665952-180670713:-|nuORF', 'ENST00000513060.5_1_5:180669121-180670896:-|nuORF', 'ENST00000502548.5_1_5:180666387-180669331:-|nuORF', 'ENST00000508963.1_1_5:180668485-180670896:-|nuORF', 'ENST00000505461.5_1_5:180668319-180670896:-|nuORF'] 124941 10460 VLLWLRYMFK True NCI_RA007_Epitope_Rep2 1367.7787848740697 1367.77768993586 45.281 2 -1.3451818533124673 0.38741013248695566 1.0 ['ENSG00000212127|ENST00000537503|TAS2R14'] 31736 8275 GEKLGWPQYNW True H1975_Epitope_Rep1 1376.6513354314798 1376.6502299358601 36.763 2 -1.3452209018950891 0.38741013248695566 1.0 ['ENSG00000159640|ENST00000290866|ACE', 'ENST00000579314.5_1_17:61565977-61574724:+|nuORF', 'ENST00000578839.5_1_17:61562212-61574724:+|nuORF', 'nc|ENSG00000159640|P12821-4|ACE', 'nc|ENSG00000159640|P12821-3|ACE'] 44306 19796 ILYGYRWP True PC9_epitope_Rep3 1066.56000124594 1066.5589099358601 81.378 2 -1.3452297211289932 0.38741013248695566 1.0 ['ENSG00000102468|ENST00000542664|HTR2A'] 30391 6181 GAEWEGRLE True H1975_Epitope_Rep2 1045.4828731240498 1045.48176993586 28.745 2 -1.3452859667108303 0.38742951947005855 1.0 ['ENST00000469963.5_1_6:31697071-31697131:-|nuORF'] 71813 6729 MNVSVC[Carbamidomethyl]GLYTY True H1975_Epitope_Rep3 1305.573345284 1305.57224993586 30.84 2 -1.3455002774118254 0.3874737031916812 1.0 ['ENSG00000175899|ENST00000318602|A2M'] 28191 6075 FRPYRFYFYMW True H1975_Epitope_Rep1 1674.7805757792196 1674.77946993586 28.434 2 -1.345506252462075 0.3874737031916812 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17'] 19304 4346 ELLTMDPDTED True NCI_RA007_Epitope_Rep2 1277.53331358405 1277.53220993586 21.541 2 -1.3455480550271937 0.3874737031916812 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1', 'FRAS1|p.G3456Afs*3|1|0.25|ENSG00000138759|chr4:78515987-78515987|G/-|frameshift_variant', 'FRAS1|p.G3729Afs*31|1|0.1|ENSG00000138759|chr4:78537086-78537086|G/-|frameshift_variant'] 3277 25045 AGGARGVIRLL True NCI_RA007_Epitope_Rep5 1081.67201130641 1081.6709099358602 103.84 2 -1.3455791889901154 0.3874737031916812 1.0 ['ENSG00000198355|ENST00000360612|PIM3'] 108680 4714 TELPRDVTV True H1975_Epitope_Rep2 1028.5502244078798 1028.54912993586 23.223 2 -1.3455815913332954 0.3874737031916812 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 33431 6918 GLGFQSAQ True PC9_epitope_Rep3 806.3922672145 806.39116993586 31.622 2 -1.345587364880126 0.3874737031916812 1.0 ['ENST00000303569.10_1_1:153930908-153931079:-|nuORF'] 139075 7461 YSLKDRAP True H1975_Epitope_Rep3 948.5028802926399 948.50178993586 33.677 2 -1.3456022990362992 0.3874810665256173 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 111739 12488 TLQEQLRAL True PC9_epitope_Rep2 1070.6084079903399 1070.60730993586 53.344 2 -1.345631926204415 0.3874884296825225 1.0 ['nc|ENSG00000184428|Q969P6-2|TOP1MT', 'ENSG00000184428|ENST00000329245|TOP1MT'] 36138 12076 GVESPLQTRL True PC9_epitope_Rep6 1098.6033226099 1098.6022299358601 57.771 2 -1.3456866574153712 0.38749579266240325 1.0 ['ENST00000558061.1_1_15:48938242-48938584:+|nuORF'] 125080 25316 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 109.41 3 -1.345706215159253 0.3875031554652658 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 22517 8818 ETKTSISIP True PC9_epitope_Rep3 974.5284263341399 974.5273299358599 38.868 2 -1.3457176749773885 0.3875205846645751 1.0 ['ENSG00000138303|ENST00000672957|ASCC1', 'nc|ENSG00000138303|Q8N9N2|ASCC1'] 68938 25127 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 105.27 3 -1.345730672944569 0.3875205846645751 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 115049 5656 TTPVNRSLSG True PC9_epitope_Rep1 1030.54072235334 1030.5396299358601 26.579 2 -1.3457675542146836 0.3875205846645751 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 6636 5397 APYLPGGR True PC9_epitope_Rep1 829.44463714053 829.44354993586 25.593 2 -1.34582700682197 0.3875205846645751 1.0 ['ENST00000234296.6_1_2:201822845-201828374:-|nuORF'] 123984 5037 VKKLLLFLK True PC9_epitope_Rep3 1100.7685374602 1100.7674499358602 24.464 2 -1.3458666069566545 0.3875279467269274 1.0 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 140015 11336 YVLILKTILS True NCI_RA007_Epitope_Rep4 1161.73729690157 1161.73564490379 50.505 3 -1.3459234091794379 0.38754732856541857 1.0 ['OR51A7|p.I254Sfs*19|1|0.11|ENSG00000176895|chr11:4908126-4908126|C/-|frameshift_variant', 'ENSG00000176895|ENST00000641490|OR51A7'] 83939 13382 QEKTVNFIKDT True NCI_RA007_Epitope_Rep1 1321.6877805098497 1321.6866899358602 56.056 2 -1.3460644541773206 0.3875860908446218 1.0 ['nc|ENSG00000075790|Q9UHQ4-2|BCAP29'] 120825 15343 VGDKLLEV True H1975_Epitope_Rep1 871.5014833103099 871.50038993586 64.285 2 -1.3460894065756799 0.3875860908446218 1.0 ['nc|ENSG00000180900|Q14160-2|SCRIB', 'nc|ENSG00000180900|Q14160|SCRIB', 'ENSG00000180900|ENST00000356994|SCRIB'] 66336 8984 LSQQPGGPDPA True PC9_epitope_Rep2 1065.5090878718897 1065.50798993586 39.911 2 -1.346221055593399 0.3876174908050674 1.0 ['ENST00000228506.7_1_12:121135231-121135438:+|nuORF'] 18804 18007 ELDVRITAL True PC9_epitope_Rep2 1028.5866099165999 1028.58550993586 74.568 2 -1.3463004671354402 0.387625594923321 1.0 ['ENSG00000047410|ENST00000367478|TPR'] 34384 4439 GPSWYPPE True PC9_epitope_Rep3 931.4075829254699 931.40648993586 22.172 2 -1.3463594995962846 0.387625594923321 1.0 ['ENST00000483813.5_1_20:32245637-32250053:-|nuORF', 'ENSG00000125967|ENST00000246190|NECAB3'] 58374 10176 LEVLEAEQNSL True H1975_Epitope_Rep1 1243.62959692739 1243.6284899358602 44.081 2 -1.3463963834654045 0.387625594923321 1.0 ['ENST00000465425.1_1_19:36497111-36499583:-|nuORF', 'ENSG00000181392|ENST00000324444|SYNE4'] 120213 15958 VFLVSVPAAP True PC9_epitope_Rep6 998.5800679841798 998.57896993586 73.681 2 -1.3464035901872369 0.387625594923321 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 119606 19971 VERVLRDLRI True H1975_Epitope_Rep1 1267.77245362367 1267.7713499358601 83.123 2 -1.3464126682090929 0.387625594923321 1.0 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'nc|ENSG00000072778|P49748-3|ACADVL', 'ENST00000583850.5_1_17:7127146-7127844:+|nuORF'] 116334 18211 TVWVRLLCPV True NCI_RA007_Epitope_Rep3 1184.67398545236 1184.67347496793 79.751 1 -1.3464438970989145 0.387625594923321 1.0 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 126019 10118 VPALTLAP True PC9_epitope_Rep5 780.47454028648 780.47344993586 43.903 2 -1.346453670943008 0.3876329547503155 1.0 ['nc|ENSG00000061273|Q8WUI4-2|HDAC7', 'ENST00000459625.5_1_12:48184825-48185932:-|nuORF'] 18354 15475 EIWRCYWQYLL True NCI_RA007_Epitope_Rep1 1571.7595059814698 1571.75840993586 64.277 2 -1.3465487239881757 0.38767171031283426 1.0 ['ENSG00000166881|ENST00000300128|NEMP1', 'nc|ENSG00000166881|O14524-2|NEMP1'] 16965 11929 EGGQILKELI True H1975_Epitope_Rep2 1098.62847472858 1098.62736993586 50.963 2 -1.3466206212200271 0.38767171031283426 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant'] 91438 14697 RNLTQSLAF True NCI_RA007_Epitope_Rep5 1048.56654317836 1048.5654499358602 63.202 2 -1.3466530751097228 0.38767441022004834 1.0 ['ENSG00000175294|ENST00000312106|CATSPER1'] 49124 20489 KGFIQKTCLIA True PC9_epitope_Rep6 1220.69511481976 1220.69400993586 91.532 2 -1.346668417794615 0.38767441022004834 1.0 ['ENSG00000256683|ENST00000243644|ZNF350'] 120805 2634 VGDELPWGWEA True NCI_RA007_Epitope_Rep5 1257.56660274801 1257.56550993586 14.819 2 -1.3467545775692076 0.3877298401634419 1.0 ['nc|ENSG00000151718|Q6AWC2-4|WWC2', 'ENSG00000151718|ENST00000403733|WWC2', 'nc|ENSG00000151718|Q6AWC2-6|WWC2'] 15975 9933 EDWQFVNDY True H1975_Epitope_Rep2 1214.48801807414 1214.4869299358602 43.197 2 -1.346776666382067 0.38773719820696784 1.0 ['ENSG00000157796|ENST00000399820|WDR19', 'ENST00000512095.5_1_4:39217537-39276579:+|nuORF'] 122623 6339 VGTLQNKR True NCI_RA007_Epitope_Rep4 914.52976374682 914.52866993586 30.988 2 -1.3468762200884496 0.3877499519323207 1.0 ['ENSG00000160326|ENST00000371899|SLC2A6', 'nc|ENSG00000160326|Q9UGQ3-2|SLC2A6'] 124937 14708 VLLWKRTWWCH True NCI_RA007_Epitope_Rep1 1526.7968945497 1526.79578993586 61.266 2 -1.3468764485491254 0.3877499519323207 1.0 ['ENST00000463441.5_1_7:150020582-150023090:+|nuORF'] 57602 6273 LELLGGAMYYL True H1975_Epitope_Rep3 1241.6365968841299 1241.63548993586 29.137 2 -1.3468908519985534 0.3877499519323207 1.0 ['ENSG00000170927|ENST00000371117|PKHD1', 'PKHD1|p.Y3352Ifs*22|1|0.62|ENSG00000170927|chr6:51744487-51744488|-/T|frameshift_variant', 'nc|ENSG00000170927|P08F94-2|PKHD1', 'PKHD1|p.L1209Wfs*11|1|0.31|ENSG00000170927|chr6:52027833-52027833|C/-|frameshift_variant', 'PKHD1|p.G2086Vfs*25|3|0.22|ENSG00000170927|chr6:51912441-51912441|C/-|frameshift_variant'] 93095 5837 RRRLREEFSFI True PC9_epitope_Rep5 1507.8371791385496 1507.83553490379 27.444 3 -1.3469253238746028 0.3877499519323207 1.0 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 128829 14514 VSSEIYQWVR True PC9_epitope_Rep1 1265.64043639461 1265.6393299358601 60.652 2 -1.34700207441464 0.3877499519323207 1.0 ['ENSG00000182568|ENST00000338745|SATB1', 'nc|ENSG00000182568|Q01826-2|SATB1'] 99324 8019 SLDPASAK True PC9_epitope_Rep1 787.40758292547 787.40648993586 35.666 2 -1.3470762228125344 0.3877727578583101 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant', 'APOB|p.G657W|1|0.5|ENSG00000084674|chr2:21027926-21027926|C/A|missense_variant'] 71217 16255 MFSEKDEFE True H1975_Epitope_Rep2 1160.4695911286797 1160.4679349037901 67.734 3 -1.3471487885419406 0.3877727578583101 1.0 ['ENSG00000135960|ENST00000258443|EDAR', 'nc|ENSG00000135960|Q9UNE0-2|EDAR'] 17493 4925 EHHLDKPYDV True NCI_RA007_Epitope_Rep2 1251.58840082175 1251.58730993586 23.778 2 -1.3471787081500337 0.3877727578583101 1.0 ['ENSG00000104611|ENST00000265807|SH2D4A', 'nc|ENSG00000104611|Q9H788-2|SH2D4A'] 20541 13161 EQANRTCFP True NCI_RA007_Epitope_Rep1 1064.4709285413599 1064.4698299358602 55.19 2 -1.3471791534382238 0.3877727578583101 1.0 ['FFAR4|p.R24C|1|0.16|ENSG00000186188|chr10:93566790-93566790|C/T|missense_variant'] 114321 11383 TSCARHGP True PC9_epitope_Rep5 827.37082057727 827.36972993586 48.783 2 -1.347290798082298 0.3877727578583101 1.0 ['ENST00000538721.6_2_17:79867404-79869149:-|nuORF'] 4709 8194 ALDSLQKWA True NCI_RA007_Epitope_Rep2 1030.54474510462 1030.54364993586 36.508 2 -1.3472951440382934 0.3877727578583101 1.0 ['ENST00000481915.5_1_3:32574447-32611850:-|nuORF', 'ENSG00000144635|ENST00000273130|DYNC1LI1'] 83920 12560 QEKDQEMERL True H1975_Epitope_Rep1 1304.60306490972 1304.60196993586 53.357 2 -1.3473081254609123 0.3877727578583101 1.0 ['ENST00000585990.5_1_17:73910371-73916335:-|nuORF', 'ENST00000593156.1_1_17:73913837-73918141:-|nuORF', 'nc|ENSG00000188878|Q8TES7-2|FBF1', 'nc|ENSG00000188878|Q8TES7|FBF1', 'nc|ENSG00000188878|Q8TES7-5|FBF1', 'ENSG00000188878|ENST00000636174|FBF1'] 23777 8101 EYKLLHEYW True NCI_RA007_Epitope_Rep2 1279.6237237013097 1279.62262993586 36.144 2 -1.3473863211060608 0.3877727578583101 1.0 ['nc|ENSG00000146414|Q149N8-4|SHPRH', 'ENSG00000146414|ENST00000275233|SHPRH', 'ENST00000433355.6_1_6:146231577-146267398:-|nuORF', 'SHPRH|p.A1344S|1|0.23|ENSG00000146414|chr6:145919470-145919470|C/A|missense_variant', 'ENST00000523276.1_1_6:146240471-146248402:-|nuORF', 'ENST00000519632.5_1_6:146239221-146248402:-|nuORF'] 88147 6023 QWQRYQHQWQR True H1975_Epitope_Rep2 1642.78654054802 1642.78544993586 28.146 2 -1.3473927182092833 0.3877801141483929 1.0 ['ENST00000577066.2_1_17:79004653-79005004:-|nuORF'] 121859 7058 VGPAGEHR True PC9_epitope_Rep5 821.41439964141 821.41330993586 32.117 2 -1.3475075356120025 0.3878262123323881 1.0 ['nc|ENSG00000105639|P52333-2|JAK3', 'ENSG00000105639|ENST00000458235|JAK3', 'ENST00000526008.5_1_19:17949989-17958765:-|nuORF', 'nc|ENSG00000105639|P52333-4|JAK3', 'ENST00000527031.5_1_19:17947866-17955268:-|nuORF', 'ENST00000528705.1_1_19:17950262-17953325:-|nuORF'] 58013 13791 LERDYHSL True PC9_epitope_Rep1 1031.50360856863 1031.5025099358602 57.892 2 -1.347526488216628 0.3878262123323881 1.0 ['nc|ENSG00000198055|P43250-3|GRK6', 'ENSG00000198055|ENST00000355472|GRK6', 'nc|ENSG00000198055|P43250-2|GRK6'] 73577 22810 NFVIKSLT True PC9_epitope_Rep6 920.53311779176 920.53202993586 100.83 2 -1.347533122661529 0.3878262123323881 1.0 ['ENST00000508935.1_1_5:102509577-102509760:+|nuORF'] 134267 23313 WRRRTQKRPV True PC9_epitope_Rep5 1381.81671847749 1381.8156299358602 94.653 2 -1.3475825840703826 0.3878335676266686 1.0 ['nc|ENSG00000263639|P08118-2|MSMB'] 25485 13781 FENYYRKQRKK True NCI_RA007_Epitope_Rep1 1558.8368447853798 1558.8357499358601 57.622 2 -1.3476694365279398 0.38783699360853474 1.0 ['nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6'] 114674 10648 TSRLPPAP True PC9_epitope_Rep1 837.4708518883699 837.46974993586 45.849 2 -1.3477074333506522 0.38783699360853474 1.0 ['ENST00000515795.1_7:286228-299943:+|nuORF'] 86443 5206 QQRGQQESRR True NCI_RA007_Epitope_Rep2 1271.64429298843 1271.6431899358602 24.869 2 -1.3477086231917543 0.38783699360853474 1.0 ['ENST00000282382.8_2_5:114916706-114916865:-|nuORF'] 5110 14782 ALLVPALA True H1975_Epitope_Rep1 766.49527573106 766.4947249679301 62.084 1 -1.3477866830414613 0.38783699360853474 1.0 ['ENST00000578151.1_1_17:56787228-56811489:+|nuORF'] 109078 13626 TFENYYRKQRR True NCI_RA007_Epitope_Rep2 1559.7957082493897 1559.79460993586 57.642 2 -1.3478233352119025 0.38783699360853474 1.0 ['ENSG00000144036|ENST00000272427|EXOC6B', 'nc|ENSG00000144036|Q9Y2D4-2|EXOC6B'] 33036 9717 GKAGGGGT True H1975_Epitope_Rep1 603.29763855367 603.2970949679301 42.304 1 -1.3478566192439367 0.38783699360853474 1.0 ['ENSG00000185668|ENST00000373012|POU3F1'] 124600 19412 VLHKRWSI True PC9_epitope_Rep4 1037.61343380113 1037.61232993586 82.779 2 -1.347896556920637 0.38783699360853474 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 16705 6243 EEVRDWVLT True NCI_RA007_Epitope_Rep2 1145.5716881284498 1145.5705899358602 28.889 2 -1.3481461331215154 0.38785709137214386 1.0 ['ENSG00000138002|ENST00000260570|IFT172', 'SETD6-IFT172|2|fusion', 'SETD6-IFT172|1|fusion'] 13413 9087 DNLSLRHR True NCI_RA007_Epitope_Rep1 1009.5417254128499 1009.54062993586 39.347 2 -1.3481502203218911 0.38785709137214386 1.0 ['MKX|p.G56S|1|0.42|ENSG00000150051|chr10:27743250-27743250|C/T|missense_variant'] 19297 10709 ELLSLPPPDV True H1975_Epitope_Rep1 1078.5910265907 1078.58992993586 46.151 2 -1.348182436551503 0.38785709137214386 1.0 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF'] 94270 21817 RWRYRCWERRF True H1975_Epitope_Rep1 1712.8582660196396 1712.8571699358602 90.693 2 -1.3481829119571018 0.38785709137214386 1.0 ['ENST00000328599.4_1_8:125463328-125463391:+|nuORF'] 26993 10198 FLLEEARL True NCI_RA007_Epitope_Rep4 989.55458151233 989.55348993586 46.082 2 -1.3481872954325869 0.38785709137214386 1.0 ['ENSG00000179104|ENST00000321196|TMTC2'] 129023 12905 VTADGALA True NCI_RA007_Epitope_Rep5 716.37046914076 716.36992496793 56.321 1 -1.3482372089244425 0.38785709137214386 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2'] 124435 10929 VLEPQAVP True PC9_epitope_Rep3 851.4752685624699 851.47416993586 47.018 2 -1.3483074741852215 0.3878671391675176 1.0 ['ENSG00000186166|ENST00000334418|CENATAC'] 26562 18971 FIWLIRSLYE True NCI_RA007_Epitope_Rep3 1338.7336085034601 1338.73195490379 82.906 3 -1.3483292203241706 0.3878671391675176 1.0 ['ENSG00000167207|ENST00000647318|NOD2', 'nc|ENSG00000167207|Q9HC29|NOD2'] 23486 22184 EVYTRVVRR True PC9_epitope_Rep1 1176.6727395823998 1176.6716499358602 90.15 2 -1.3483332647697142 0.3878671391675176 1.0 ['ENST00000477618.1_1_9:74817496-74842957:+|nuORF', 'nc|ENSG00000119125|Q9Y2T3-2|GDA', 'ENSG00000119125|ENST00000358399|GDA', 'nc|ENSG00000119125|Q9Y2T3-3|GDA'] 45930 15023 ISRWFEVERRE True PC9_epitope_Rep6 1505.77391017565 1505.77280993586 69.811 2 -1.3483696658371938 0.3878732553390828 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 36357 9368 GVHLYQSPPGR True PC9_epitope_Rep3 1209.6254550368099 1209.62380490379 40.973 3 -1.3484634458499765 0.3878732553390828 1.0 ['PCDH8|p.P1050H|1|0.44|ENSG00000136099|chr13:52844624-52844624|G/T|missense_variant'] 3125 9474 AGDFRTHPFFF True NCI_RA007_Epitope_Rep4 1340.6302060640794 1340.62855490379 43.298 3 -1.3484857883834713 0.3878732553390828 1.0 ['nc|ENSG00000104936|Q09013-12|DMPK', 'nc|ENSG00000104936|Q09013-10|DMPK', 'nc|ENSG00000104936|Q09013-11|DMPK', 'nc|ENSG00000104936|Q09013-15|DMPK', 'ENSG00000104936|ENST00000291270|DMPK', 'nc|ENSG00000104936|Q09013-16|DMPK', 'nc|ENSG00000104936|Q09013-2|DMPK', 'nc|ENSG00000104936|Q09013-8|DMPK', 'ENST00000596686.5_1_19:46273741-46282867:-|nuORF', 'nc|ENSG00000104936|Q09013-5|DMPK', 'nc|ENSG00000104936|Q09013-7|DMPK', 'nc|ENSG00000104936|Q09013-6|DMPK', 'nc|ENSG00000104936|Q09013-1|DMPK'] 122626 6866 VGTLSLRP True NCI_RA007_Epitope_Rep5 841.50215201665 841.50160496793 33.092 1 -1.348515501175056 0.3878732553390828 1.0 ['ENST00000565677.5_1_16:730312-731203:+|nuORF'] 36899 10729 GVQREEVP True PC9_epitope_Rep3 912.4664947839199 912.46538993586 46.224 2 -1.3486044818740388 0.3878732553390828 1.0 ['CON__Q2UVX4'] 79158 3649 PGAVETTL True NCI_RA007_Epitope_Rep2 786.41233395274 786.41122993586 18.843 2 -1.3486070893468782 0.3878732553390828 1.0 ['ENST00000382938.3_1_15:29363239-29394119:+|nuORF'] 114501 13177 TSFRQRAFPRQ True PC9_epitope_Rep5 1392.7374650972797 1392.73636993586 55.691 2 -1.348608252119417 0.3878732553390828 1.0 ['ENST00000308982.11_1_3:128598473-128603521:+|nuORF', 'ENST00000505602.1_1_3:128598473-128598902:+|nuORF', 'ENST00000515429.1_1_3:128598503-128612413:+|nuORF', 'ENST00000505192.5_1_3:128598473-128627108:+|nuORF'] 62075 3745 LLNDKEEA True H1975_Epitope_Rep3 930.4658260775799 930.46472993586 19.481 2 -1.3486220636617419 0.3878732553390828 1.0 ['nc|ENSG00000183323|Q86Z20-2|CCDC125', 'ENSG00000183323|ENST00000396496|CCDC125'] 33125 14873 GKPHGRGV True NCI_RA007_Epitope_Rep3 806.4511195033 806.45002993586 65.935 2 -1.3486507247152777 0.3878732553390828 1.0 ['ENSG00000003393|ENST00000264276|ALS2', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF'] 125208 19797 VLQLSLRIV True PC9_epitope_Rep5 1039.67536535135 1039.6742699358601 81.194 2 -1.3487034854481872 0.38791664164314454 1.0 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF'] 22753 8666 EVAPEPRPGP True NCI_RA007_Epitope_Rep1 1047.5349086969097 1047.53380993586 37.711 2 -1.3487804110299566 0.3879313451121227 1.0 ['ENST00000522060.1_1_8:144090549-144099792:-|nuORF', 'ENST00000518831.1_1_8:144098425-144099792:-|nuORF', 'ENST00000517833.1_1_8:144063675-144099792:-|nuORF'] 7311 20739 ARRRNRRRLF True H1975_Epitope_Rep2 1399.84974994127 1399.84810490379 85.878 3 -1.3488440231113688 0.3879313451121227 1.0 ['ENSG00000168421|ENST00000381799|RHOH'] 22664 6094 ETSIPSVRPP True H1975_Epitope_Rep3 1081.57677350889 1081.57566993586 28.453 2 -1.3489402059791886 0.3879386965817099 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-5|OBSCN', 'OBSCN|p.H4054Tfs*31|1|0.21|ENSG00000154358|chr1:228307133-228307133|C/-|frameshift_variant', 'OBSCN|p.R2782Lfs*22|1|0.23|ENSG00000154358|chr1:228282079-228282080|-/T|frameshift_variant', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 129737 23230 VTKIREFI True PC9_epitope_Rep3 1004.6018660579199 1004.60076993586 94.629 2 -1.3489705769430431 0.3879440801325935 1.0 ['ENSG00000223501|ENST00000445902|VPS52', 'nc|ENSG00000223501|Q8N1B4-2|VPS52'] 58998 11639 LGAKPQSL True NCI_RA007_Epitope_Rep4 812.4756029156399 812.4750549679301 51.723 1 -1.3489949233753984 0.3879440801325935 1.0 ['RBM38|p.R116Q|1|0.11|ENSG00000132819|chr20:57392763-57392763|G/A|missense_variant'] 134141 19920 WRFHTKYMMWF True NCI_RA007_Epitope_Rep2 1631.75298113239 1631.7518899358602 82.484 2 -1.3489961216533157 0.3879440801325935 1.0 ['ENSG00000088038|ENST00000221232|CNOT3'] 118581 6397 VEADTPTVPP True H1975_Epitope_Rep3 1024.5076908895599 1024.5065899358601 29.583 2 -1.348998898317234 0.3879440801325935 1.0 ['ENSG00000131080|ENST00000374719|EDA2R', 'nc|ENSG00000131080|Q9HAV5-3|EDA2R', 'nc|ENSG00000131080|Q9HAV5-2|EDA2R'] 25719 21362 FFKMKHDFK True PC9_epitope_Rep3 1226.6270352599397 1226.62537490379 87.466 3 -1.349141413155852 0.38802349182710205 1.0 ['DCTN4|p.C418F|1|0.78|ENSG00000132912|chr5:150711279-150711279|C/A|missense_variant'] 107331 8214 SYREPKHPL True PC9_epitope_Rep4 1125.5930922793698 1125.59143490379 39.054 3 -1.3492067286174525 0.38804285165257496 1.0 ['nc|ENSG00000072071|O94910|ADGRL1', 'ENSG00000072071|ENST00000361434|ADGRL1'] 61792 10846 LLKLKHFPSVI True NCI_RA007_Epitope_Rep4 1293.81727855777 1293.81562490379 48.569 3 -1.349278214432301 0.38805020116495526 1.0 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 69424 6085 LVRFRRAGP True PC9_epitope_Rep2 1070.6461309117399 1070.64502993586 28.798 2 -1.3494475829164914 0.38806489966012947 1.0 ['ENST00000607688.1_1_5:132299484-132299748:+|nuORF'] 139218 11751 YSWKKDWYSH True H1975_Epitope_Rep1 1398.6356853673399 1398.63458993586 50.194 2 -1.3494494981443301 0.38806489966012947 1.0 ['ENSG00000066422|ENST00000312938|ZBTB11'] 82661 24534 PVLSLLRREA True PC9_epitope_Rep4 1152.69789170108 1152.6967899358601 102.86 2 -1.3495108807946978 0.38807224864293605 1.0 ['ENSG00000116032|ENST00000234389|GRIN3B', 'GRIN3B|p.S402Lfs*19|1|0.44|ENSG00000116032|chr19:1004703-1004703|C/-|frameshift_variant', 'GRIN3B|p.K416Sfs*5|1|0.19|ENSG00000116032|chr19:1004744-1004744|C/-|frameshift_variant'] 17740 7804 EHTDPQPSNKP True H1975_Epitope_Rep1 1248.5734790336 1248.57184490379 34.972 3 -1.3496378978780184 0.38815165307617483 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 4551 18487 AKVIRSLHGR True NCI_RA007_Epitope_Rep4 1135.69380938015 1135.6927099358602 80.016 2 -1.349707154323689 0.38815433944590555 1.0 ['nc|ENSG00000115648|Q9BV36-5|MLPH', 'nc|ENSG00000115648|Q9BV36-2|MLPH', 'ENSG00000115648|ENST00000264605|MLPH', 'nc|ENSG00000115648|Q9BV36-3|MLPH', 'ENST00000468178.5_1_2:238402069-238454213:+|nuORF', 'nc|ENSG00000115648|Q9BV36-4|MLPH', 'ENST00000469619.5_1_2:238402069-238419788:+|nuORF'] 133324 16758 WERPNFNIK True NCI_RA007_Epitope_Rep2 1202.6196413803798 1202.61907496793 69.918 1 -1.3497135179628976 0.38815433944590555 1.0 ['ENSG00000115364|ENST00000393909|MRPL19'] 36112 6637 GVELQAAA True PC9_epitope_Rep3 757.3970182417698 757.39592993586 30.552 2 -1.3498238300846601 0.38817369584013833 1.0 ['nc|ENSG00000140993|Q6NT04-2|TIGD7', 'ENSG00000140993|ENST00000396862|TIGD7'] 131486 837 VVVAKPKG True NCI_RA007_Epitope_Rep1 796.5170738047999 796.51596993586 4.4352 2 -1.349913121214448 0.388189808366553 1.0 ['PDILT|p.R364Lfs*5|1|0.18|ENSG00000169340|chr16:20369515-20369517|TGC/A|frameshift_variant', 'ENSG00000169340|ENST00000302451|PDILT'] 106346 21830 SVSFSPLFIFQ True NCI_RA007_Epitope_Rep5 1270.65977485686 1270.6586699358602 91.096 2 -1.3499307805940828 0.388189808366553 1.0 ['ENST00000548283.6_1_12:112373822-112373960:-|nuORF'] 78273 23332 PARRGVRRGR True PC9_epitope_Rep1 1179.7173387893897 1179.71624993586 94.537 2 -1.3499474731450023 0.388189808366553 1.0 ['ENST00000359013.4_1_3:30648217-30664756:+|nuORF', 'ENST00000295754.9_1_3:30648085-30686250:+|nuORF'] 125564 20288 VLYMLTEM True PC9_epitope_Rep3 998.48167646586 998.48056993586 83.289 2 -1.3499665506418304 0.388189808366553 1.0 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant', 'ARID2|p.G803Afs*19|1|0.12|ENSG00000189079|chr12:45850530-45850530|G/-|frameshift_variant', 'ENST00000480128.1_1_12:46231109-46233281:+|nuORF', 'ENST00000479608.5_1_12:46230576-46239804:+|nuORF'] 28242 8804 FRSSFRAGL True PC9_epitope_Rep1 1039.5563128478298 1039.5552099358601 38.706 2 -1.3500314044367305 0.388189808366553 1.0 ['chr1:89418355-89420191|333|23.34|0.01|11.25|+|0|TE_info:L1PA2,L1PA2_dup101,L1,LINE,donor,-,89412580,89418355|None,GBP1P1|105', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|260|1|anti-sense', 'chr1:245764149-245816795|362|34.57|0.05|9.58|-|1|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|93', 'L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|338|3|anti-sense', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|160|1|anti-sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|338|3|anti-sense', 'L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|202|1|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|198|1|anti-sense', 'chr8:91197524-91200613|289|13.1|0.22|5.87|+|0|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|59', 'chr6:83315413-83334213|140|10.1|0.0|19.95|-|1|TE_info:L1HS,L1HS_dup688,L1,LINE,donor,+,83334213,83339981|ME1,None|43', 'chr6:45020632-45176322|132|12.64|0.0|13.05|-|0|TE_info:L1PA3,L1PA3_dup4060,L1,LINE,donor,+,45176322,45181869|SUPT3H,None|71', 'chr6:45020632-45062708|281|10.85|0.01|10.56|-|2|TE_info:L1PA2,L1PA2_dup1868,L1,LINE,donor,+,45062708,45068476|SUPT3H,None|60', 'chr6:109250991-109254448|382|11.17|0.13|6.42|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|82', 'chr5:90929313-90965415|333|22.99|0.23|6.64|+|1|TE_info:L1PA2,L1PA2_dup1646,L1,LINE,donor,-,90923631,90929313|None,ADGRV1|73', 'chr5:90822097-90965415|264|32.48|0.18|7.5|+|1|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|77', 'chr3:195086022-195087933|373|11.99|0.24|5.62|-|1|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|80', 'chr3:195070111-195088018|311|10.27|0.09|6.77|-|2|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195088018,195093677|XXYLT1,None|80', 'chr3:195070111-195087933|359|13.86|0.27|5.66|-|1|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|80', 'chr3:121938530-121939349|399|11.42|0.04|8.21|+|1|TE_info:L1PA3,L1PA3_dup2051,L1,LINE,donor,-,121932761,121938530|None,SLC15A2|93', 'chr3:121938445-121939349|375|11.28|0.04|8.23|+|2|TE_info:L1PA3,L1PA3_dup2051,L1,LINE,donor,-,121932761,121938445|None,SLC15A2|93', 'chr3:118905718-118914503|368|14.39|0.0|11.97|-|0|TE_info:L1PA2,L1PA2_dup926,L1,LINE,donor,+,118914503,118920271|IGSF11,None|73', 'chr15:53523322-53540662|439|28.56|0.17|7.41|-|0|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|83', 'chr14:58012150-58032884|335|10.01|0.03|8.51|-|0|TE_info:L1PA2,L1PA2_dup4307,L1,LINE,donor,+,58032884,58038561|ARMH4,None|71', 'chr11:102374933-102377496|150|10.29|0.03|8.55|+|1|TE_info:L1PA2,L1PA2_dup3799,L1,LINE,donor,-,102369167,102374933|None,BIRC2|82', 'chr1:59653519-59660219|387|26.66|0.05|9.04|+|0|TE_info:L1PA2,L1PA2_dup41,L1,LINE,donor,-,59647748,59653519|None,FGGY|52', 'chr1:245814415-245816795|376|16.24|0.01|10.82|-|1|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|93', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|346|3|anti-sense', 'chr2:113477199-113482177|379|28.75|0.21|7.07|+|0|TE_info:L1PA3,L1PA3_dup1127,L1,LINE,donor,-,113471482,113477199|None,ZNG1B|85'] 12504 7602 DLAEKNVAS True PC9_epitope_Rep6 945.47672511445 945.47562993586 38.524 2 -1.3500411423156473 0.388189808366553 1.0 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000475899.1_1_3:193355061-193361921:+|nuORF'] 3269 5431 AGFSPGPM True PC9_epitope_Rep1 762.3370608375 762.33596993586 25.724 2 -1.3500809375687206 0.388189808366553 1.0 ['ENST00000466409.1_1_9:95874378-95875386:+|nuORF'] 64997 10281 LSDGTGAFY True H1975_Epitope_Rep2 929.4130622287298 929.41196993586 44.552 2 -1.3500937015150973 0.388189808366553 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 79582 7939 PGTSIPAW True NCI_RA007_Epitope_Rep2 827.41775368635 827.41664993586 35.512 2 -1.3501491569903246 0.388189808366553 1.0 ['nc|ENSG00000267106|K7EIQ3-2|ZNF561-AS1'] 129871 12122 VTLQIPFYRP True PC9_epitope_Rep3 1232.6917436914798 1232.6906499358602 51.669 2 -1.3501892753816882 0.388189808366553 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 92888 22815 RRNINYRSF True NCI_RA007_Epitope_Rep5 1224.6475874637201 1224.64594490379 94.97 3 -1.3501907265708954 0.388189808366553 1.0 ['ENSG00000160445|ENST00000291900|ZER1'] 114543 8095 TSIEKEVFPIM True H1975_Epitope_Rep1 1292.6686252883999 1292.66752993586 36.083 2 -1.350211973506967 0.388189808366553 1.0 ['ENSG00000173540|ENST00000308388|GMPPB', 'nc|ENSG00000173540|Q9Y5P6-2|GMPPB'] 121025 11949 VGFESRDP True H1975_Epitope_Rep2 905.4242956187699 905.42318993586 51.04 2 -1.3502428016622097 0.38819983911054545 1.0 ['ENST00000577917.5_1_19:5681066-5684844:+|nuORF'] 2088 7881 AELLYSLQ True NCI_RA007_Epitope_Rep1 935.49639792987 935.49530993586 34.648 2 -1.3502626007757026 0.38819983911054545 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 15437 20471 EANLAGLFPP True PC9_epitope_Rep5 1027.53384606775 1027.53274993586 83.778 2 -1.3503037609315982 0.38819983911054545 1.0 ['ENSG00000134575|ENST00000672073|ACP2', 'nc|ENSG00000134575|P11117-2|ACP2', 'ENST00000444355.5_1_11:47267202-47270343:-|nuORF'] 16016 9928 EEAERAEYSLQ True NCI_RA007_Epitope_Rep1 1323.59427404783 1323.59316993586 42.621 2 -1.3503343121427287 0.3882025237426311 1.0 ['RPAP1|p.G389E|1|0.42|ENSG00000103932|chr15:41528329-41528329|C/T|missense_variant'] 131650 12719 VWFRENWHEEV True H1975_Epitope_Rep2 1529.70516190949 1529.7040699358602 54.024 2 -1.3503480782197395 0.3882025237426311 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 67904 5241 LTLAFASQLK True H1975_Epitope_Rep1 1090.6386454894598 1090.63754993586 25.223 2 -1.350393895670485 0.38820520824578886 1.0 ['ENSG00000138375|ENST00000357276|SMARCAL1', 'SMARCAL1|p.K411N|1|0.29|ENSG00000138375|chr2:216428681-216428681|G/C|missense_variant'] 97261 5618 SFNRSSNLIQ True NCI_RA007_Epitope_Rep1 1164.58873517492 1164.5876299358601 25.915 2 -1.3504592175052175 0.38820520824578886 1.0 ['ENSG00000128000|ENST00000434248|ZNF780B'] 63483 15458 LPHKVCRRC True H1975_Epitope_Rep1 1110.59027291174 1110.5891699358601 64.73 2 -1.3505359772422152 0.38821989843084054 1.0 ['ENSG00000140479|ENST00000611716|PCSK6', 'nc|ENSG00000140479|P29122-2|PCSK6'] 71663 22725 MLSPRNHLI True PC9_epitope_Rep4 1079.59098410439 1079.5898899358601 95.632 2 -1.3505870468946382 0.38821989843084054 1.0 ['NFASC|p.Q438H|1|0.31|ENSG00000163531|chr1:204974213-204974213|G/C|missense_variant'] 28992 20056 FTHWFFSF True PC9_epitope_Rep5 1117.50215201665 1117.50104993586 82.199 2 -1.3506485408464821 0.3882345879104388 1.0 ['PDZD8|p.K1070Nfs*8|1|0.1|ENSG00000165650|chr10:117283523-117283523|T/-|frameshift_variant', 'ENSG00000165650|ENST00000334464|PDZD8'] 99657 10585 SLGAARPLP True NCI_RA007_Epitope_Rep2 880.5130510535199 880.51194993586 45.772 2 -1.3506789788137317 0.3882345879104388 1.0 ['ENST00000487192.1_1_2:242162779-242163565:+|nuORF'] 57758 11135 LENRVEDLWRK True NCI_RA007_Epitope_Rep1 1456.7786612029197 1456.7775699358601 47.313 2 -1.3507385293640393 0.3882419323857088 1.0 ['ENSG00000139537|ENST00000320516|CCDC65', 'nc|ENSG00000139537|Q8IXS2-2|CCDC65'] 27245 11538 FLVPTGVP True PC9_epitope_Rep1 828.4745402864799 828.47344993586 49.26 2 -1.3507818559144062 0.38825732566654264 1.0 ['nc|ENSG00000182667|Q9P121-3|NTM', 'nc|ENSG00000182667|Q9P121|NTM', 'nc|ENSG00000182667|Q9P121-4|NTM', 'ENST00000479431.1_1_11:131781360-132016587:+|nuORF', 'nc|ENSG00000183715|Q14982-4|OPCML', 'nc|ENSG00000183715|Q14982|OPCML'] 87142 14722 QSIADGFKEA True PC9_epitope_Rep1 1064.51383889916 1064.5132749679299 61.45 1 -1.3508441696495121 0.38825732566654264 1.0 ['SOS2|p.P1259*|1|0.09|ENSG00000100485|chr14:50118556-50118569|GAGGAGTGCTTGGC/-|frameshift_variant', 'ENSG00000100485|ENST00000216373|SOS2'] 133319 5942 WERERERERER True H1975_Epitope_Rep1 1629.8083981914099 1629.80730993586 27.927 2 -1.350853903855877 0.38825732566654264 1.0 ['GSE1|p.R339W|1|0.81|ENSG00000131149|chr16:85656368-85656368|C/T|missense_variant'] 82061 6311 PSVQHLGEV True PC9_epitope_Rep2 964.4977949121999 964.49668993586 29.674 2 -1.3508835860808286 0.38825732566654264 1.0 ['ENST00000592869.1_1_17:74152379-74154596:-|nuORF'] 129853 25646 VTLKTIKK True NCI_RA007_Epitope_Rep5 929.62735252977 929.62624993586 106.19 2 -1.350903718347751 0.38825732566654264 1.0 ['nc|ENSG00000186462|Q9ULW6-2|NAP1L2', 'ENSG00000186462|ENST00000373517|NAP1L2', 'nc|ENSG00000187109|P55209-3|NAP1L1', 'nc|ENSG00000187109|P55209-2|NAP1L1', 'ENSG00000187109|ENST00000618691|NAP1L1'] 78365 5634 PATSNPPPA True PC9_epitope_Rep5 850.4184819623399 850.41738993586 26.671 2 -1.3509549851726255 0.38825732566654264 1.0 ['ENST00000376259.6_1_1:12268171-12268300:+|nuORF'] 122642 4278 VGTNPVMYV True PC9_epitope_Rep3 978.48445334718 978.48334993586 21.566 2 -1.3509735494200148 0.38825732566654264 1.0 ['ENST00000262198.8_1_18:77897135-77897174:+|nuORF'] 117724 4940 VALAVASK True NCI_RA007_Epitope_Rep5 757.46978925921 757.46868993586 25.702 2 -1.351007336646951 0.38826000840285696 1.0 ['ENSG00000118873|ENST00000358951|RAB3GAP2', 'RAB3GAP2|p.A1355Cfs*5|1|0.26|ENSG00000118873|chr1:220151370-220151371|-/A|frameshift_variant'] 139614 12030 YTRMDNHLEEL True H1975_Epitope_Rep2 1419.64526407487 1419.6441699358602 51.354 2 -1.3510176545334849 0.38826000840285696 1.0 ['ENST00000372722.7_1_20:44037543-44038777:+|nuORF'] 59348 5760 LGKLEDSK True NCI_RA007_Epitope_Rep3 888.4916469025999 888.49054993586 29.637 2 -1.3511100643494622 0.3882793556286462 1.0 ['ENSG00000168916|ENST00000513986|ZNF608', 'nc|ENSG00000168916|Q9ULD9-2|ZNF608'] 56264 8032 LDQGLILK True NCI_RA007_Epitope_Rep5 898.5487678559 898.54766993586 37.586 2 -1.3511969114681524 0.3883013840041292 1.0 ['nc|ENSG00000228741|Q96N96-3|SPATA13'] 19078 8858 ELHLCHCPA True PC9_epitope_Rep1 1021.4473566458099 1021.44624993586 38.913 2 -1.3512160977208048 0.3883013840041292 1.0 ['ENSG00000171492|ENST00000337338|LRRC8D'] 124943 13150 VLLYWMHI True PC9_epitope_Rep2 1073.57320878193 1073.57210993586 55.852 2 -1.3512240663003672 0.3883013840041292 1.0 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|329|3|anti-sense', 'chr1:245814415-245816795|376|16.24|0.01|10.82|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|57', 'chr1:245764149-245816795|362|34.57|0.05|9.58|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|57'] 94002 20603 RVQAGPFP True PC9_epitope_Rep2 870.4711862415398 870.47008993586 84.683 2 -1.351302203247701 0.38830872644340414 1.0 ['nc|ENSG00000244482|Q6PI73-2|LILRA6', 'nc|ENSG00000244482|Q6PI73|LILRA6', 'nc|ENSG00000204577|O75022|LILRB3', 'nc|ENSG00000204577|O75022-3|LILRB3', 'nc|ENSG00000204577|O75022-2|LILRB3'] 17823 10487 EIAEAYLGK True PC9_epitope_Rep4 992.5178616504398 992.51676993586 48.054 2 -1.3513932381754925 0.38832341079316307 1.0 ['ENSG00000109971|ENST00000534624|HSPA8', 'HSPA8|p.N584Efs*5|1|0.25|ENSG00000109971|chr11:123058258-123058259|-/T|frameshift_variant', 'nc|ENSG00000109971|P11142-2|HSPA8', 'ENST00000527983.5_1_11:122930124-122932032:-|nuORF', 'ENST00000456928.2_1_12:4206979-4207195:+|nuORF', 'ENST00000532780.5_1_11:122930757-122933127:-|nuORF', 'ENST00000419827.2_1_7:10491071-10492091:+|nuORF'] 20147 5876 ENLVANTARSP True H1975_Epitope_Rep2 1170.5992998586198 1170.59820993586 27.588 2 -1.35141095249346 0.38832341079316307 1.0 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3'] 81009 9073 PNRPRRGQ True PC9_epitope_Rep2 979.54239411919 979.54128993586 40.243 2 -1.351462433973902 0.3883307527036597 1.0 ['ENST00000373034.8_1_X:99664142-99664250:-|nuORF'] 78227 16736 PAPVAPRGLL True PC9_epitope_Rep1 989.6022004110899 989.60110993586 69.202 2 -1.3515057266501453 0.3883380944379096 1.0 ['ENST00000521682.5_1_8:144356964-144357361:+|nuORF'] 88726 14326 RCWWRWPRCYW True NCI_RA007_Epitope_Rep5 1696.7656115047598 1696.7645099358601 61.796 2 -1.3515644538858107 0.3883601185832423 1.0 ['ENST00000341500.9_1_19:7267817-7293934:-|nuORF'] 3446 6900 AGLFFLFFVR True H1975_Epitope_Rep3 1215.68045073179 1215.67934993586 31.5 2 -1.3515928918608204 0.3883601185832423 1.0 ['ENSG00000143653|ENST00000366510|SCCPDH'] 74764 9115 NLLSSKPSL True PC9_epitope_Rep2 957.54949613189 957.54838993586 40.401 2 -1.35164368542437 0.3883601185832423 1.0 ['ENSG00000164715|ENST00000297293|LMTK2', 'ANKIB1-LMTK2|1|fusion'] 5288 17288 ALRPVLILG True PC9_epitope_Rep6 950.6276868829399 950.62713496793 79.104 1 -1.3517226568490448 0.3883674596125687 1.0 ['nc|ENSG00000151208|Q8TDM6-2|DLG5', 'nc|ENSG00000151208|Q8TDM6-4|DLG5', 'ENSG00000151208|ENST00000372391|DLG5', 'nc|ENSG00000151208|Q8TDM6-5|DLG5', 'ENST00000475613.6_1_10:79552200-79579275:-|nuORF', 'ENST00000463362.5_1_10:79552200-79579794:-|nuORF', 'ENST00000459739.5_1_10:79553706-79569486:-|nuORF'] 59457 9526 LGNFFACLP True PC9_epitope_Rep5 980.4789740439198 980.47786993586 41.6 2 -1.3517701291376691 0.3883701392222756 1.0 ['nc|ENSG00000184863|Q96EV2-2|RBM33'] 134474 7750 WTRQCSENMGF True NCI_RA007_Epitope_Rep4 1357.5543408954898 1357.55324993586 36.489 2 -1.351770442327117 0.3883701392222756 1.0 ['ENST00000254029.7_2_X:117543480-117543552:+|nuORF'] 41185 24273 IAAAVVVVTYP True H1975_Epitope_Rep3 1101.6433965167298 1101.6422899358602 101.11 2 -1.3518667547085312 0.3883774798670203 1.0 ['ENSG00000205639|ENST00000338315|MFSD2B'] 119821 9041 VEVMCIVP True PC9_epitope_Rep6 888.4448970343199 888.44378993586 44.823 2 -1.3519069198238156 0.38838482033556565 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF', 'ENST00000511019.1_1_5:14480069-14481814:+|nuORF'] 64069 7076 LQDSWLM[Oxidation]QAVL True NCI_RA007_Epitope_Rep2 1318.6591236143001 1318.6580299358602 32.148 2 -1.3519849067456353 0.38841616360428693 1.0 ['ENST00000481262.6_1_15:40705272-40727929:+|nuORF'] 127662 11276 VRELYRAWYRE True H1975_Epitope_Rep3 1539.7946456202296 1539.79354993586 48.478 2 -1.352010001516972 0.3884235034323844 1.0 ['ENSG00000184983|ENST00000498737|NDUFA6'] 83582 16325 QDSVRHRILYL True H1975_Epitope_Rep1 1398.77318189966 1398.77208993586 68.152 2 -1.352145272520668 0.3884575227717307 1.0 ['ENSG00000278057|ENST00000617225|TEX28'] 5132 12165 ALMVDILEEF True PC9_epitope_Rep6 1178.5893123385397 1178.58766490379 58.149 3 -1.3521472201505975 0.3884575227717307 1.0 ['KIAA1586|p.I530V|1|0.3|ENSG00000168116|chr6:57054087-57054087|A/G|missense_variant'] 64582 6534 LRDSHRLRSPG True NCI_RA007_Epitope_Rep1 1292.706164969 1292.7045149037901 29.43 3 -1.352153076236685 0.3884575227717307 1.0 ['ENST00000545570.5_1_16:28874966-28878725:+|nuORF'] 45823 6597 ISPNPKCGK True NCI_RA007_Epitope_Rep4 942.4956867372199 942.49458993586 32.001 2 -1.3522420742104337 0.3884888632872504 1.0 ['ENSG00000133800|ENST00000256178|LYVE1'] 56405 12789 LDSEFIDPLM True H1975_Epitope_Rep3 1178.5529268298199 1178.55182993586 54.41 2 -1.3522781722404746 0.3884962018024937 1.0 ['ENSG00000118985|ENST00000237853|ELL2'] 13976 17354 DRPNLELLRAL True NCI_RA007_Epitope_Rep5 1308.75138382592 1308.75028993586 73.532 2 -1.352412940549045 0.38856354254170167 1.0 ['nc|ENSG00000005379|O95153-2|TSPOAP1', 'ENSG00000005379|ENST00000343736|TSPOAP1', 'nc|ENSG00000005379|O95153-3|TSPOAP1'] 124110 23198 VKTSKSSS True PC9_epitope_Rep4 822.4446967101801 822.44414496793 97.46 1 -1.3525414731465002 0.3885762284754305 1.0 ['nc|ENSG00000185261|Q8IV33-3|KIAA0825', 'nc|ENSG00000185261|Q8IV33|KIAA0825', 'ENSG00000185261|ENST00000682413|KIAA0825', 'nc|ENSG00000185261|Q8IV33-2|KIAA0825'] 118600 16331 VEAIREALVDK True PC9_epitope_Rep6 1241.69795127073 1241.6968499358602 75.189 2 -1.3525845652203181 0.3885762284754305 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6', 'CYP2B6|p.L201Cfs*24|1|0.15|ENSG00000197408|chr19:41007020-41007020|C/-|frameshift_variant', 'nc|ENSG00000197408|P20813-2|CYP2B6'] 11691 16075 DHERERFYIYR True H1975_Epitope_Rep1 1582.7640737679399 1582.7629699358602 67.172 2 -1.352660067889196 0.3885762284754305 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1'] 34085 21230 GNWILHRQDL True PC9_epitope_Rep2 1250.65200413782 1250.65090993586 87.12 2 -1.3526814800343527 0.3885762284754305 1.0 ['ENST00000602591.1_1_6:30256646-30256907:-|nuORF'] 125419 17393 VLTLTITT True PC9_epitope_Rep5 860.5218844017201 860.52078993586 71.904 2 -1.3527090394378616 0.3885762284754305 1.0 ['SLIT2|p.N183Tfs*60|1|0.21|ENSG00000145147|chr4:20486207-20486207|A/-|frameshift_variant'] 140173 24638 YVTKTVLAA True NCI_RA007_Epitope_Rep5 964.5593325395998 964.55878496793 102.25 1 -1.352740964065236 0.38857759913612094 1.0 ['ENSG00000119285|ENST00000366582|HEATR1'] 13457 8181 DPAKFPEARLE True H1975_Epitope_Rep1 1271.6510010783097 1271.64990993586 36.408 2 -1.3527801730763693 0.38857759913612094 1.0 ['ENSG00000137547|ENST00000260102|MRPL15'] 69934 17402 LYDRGISSSP True H1975_Epitope_Rep3 1093.54038800017 1093.53987496793 72.615 1 -1.3528992578316246 0.38857759913612094 1.0 ['nc|nan|Q3C1V1-2|C11orf91', 'ENSG00000205177|ENST00000379011|C11orf91'] 43771 14742 IIYLQCCFRRM True H1975_Epitope_Rep2 1444.7141530955198 1444.71304993586 61.865 2 -1.3529232760640533 0.38857759913612094 1.0 ['nc|ENSG00000197535|Q9Y4I1-2|MYO5A', 'nc|ENSG00000197535|Q9Y4I1|MYO5A', 'ENSG00000197535|ENST00000399233|MYO5A'] 31141 6674 GDAIHKRNQSH True NCI_RA007_Epitope_Rep1 1261.62758029513 1261.62648993586 29.971 2 -1.3529335417480821 0.38857759913612094 1.0 ['ENSG00000173611|ENST00000336505|SCAI', 'nc|ENSG00000173611|Q8N9R8-2|SCAI'] 36513 11473 GVKKLFIF True NCI_RA007_Epitope_Rep4 950.5953241254998 950.59422993586 51.064 2 -1.3529458932336016 0.38857759913612094 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 102176 24154 SPRVVPGR True PC9_epitope_Rep1 866.5086343794198 866.50752993586 97.723 2 -1.3529487164662657 0.38857759913612094 1.0 ['ENST00000345306.10_2_5:68665685-68667980:+|nuORF'] 35626 9052 GTLPTLQKP True PC9_epitope_Rep5 953.55458151233 953.55348993586 39.763 2 -1.352950895333861 0.38857759913612094 1.0 ['nc|ENSG00000196352|P08174-6|CD55', 'nc|ENSG00000196352|P08174-7|CD55'] 14181 4749 DSQPNSTR True PC9_epitope_Rep5 903.40462280335 903.40352993586 23.316 2 -1.3529612858961424 0.38857759913612094 1.0 ['L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|21|1|sense', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|61|2|sense', 'L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|61|2|sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|78|2|sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|115|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|103|2|sense', 'L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|70|2|sense'] 109341 7816 TGHRVHSFQLI True H1975_Epitope_Rep1 1293.6942033029698 1293.69310993586 35.019 2 -1.3529949710157092 0.38857759913612094 1.0 ['DPRX|p.P127H|1|0.21|ENSG00000204595|chr19:53636792-53636792|C/A|missense_variant'] 91266 22573 RLVTRYIYNR True H1975_Epitope_Rep3 1352.7677025963999 1352.76604490379 94.348 3 -1.3532270927028083 0.38858493508986636 1.0 ['ENST00000487676.1_1_6:32632488-32634384:-|nuORF', 'ENSG00000179344|ENST00000434651|HLA-DQB1'] 90225 16412 RHLGSTPRLS True PC9_epitope_Rep5 1122.62578938998 1122.62413490379 68.128 3 -1.3533325073141054 0.3885856198485921 1.0 ['ENSG00000140829|ENST00000268482|DHX38', 'ENST00000564307.5_1_16:72132668-72133652:+|nuORF'] 128137 23427 VRRVLQIPMW True PC9_epitope_Rep4 1296.7488817281198 1296.74722490379 98.398 3 -1.35340753420732 0.3885856198485921 1.0 ['ENST00000498426.5_1_1:196286396-196434478:-|nuORF', 'nc|ENSG00000162687|Q6UVM3-4|KCNT2', 'ENST00000610076.1_1_1:196227273-196577439:-|nuORF', 'KCNT2|p.N1058Ifs*3|2|0.66|ENSG00000162687|chr1:196258232-196258232|T/-|frameshift_variant', 'nc|ENSG00000162687|Q6UVM3-3|KCNT2', 'nc|ENSG00000162687|Q6UVM3-2|KCNT2', 'ENSG00000162687|ENST00000294725|KCNT2'] 83253 6609 QADRLFED True PC9_epitope_Rep1 992.4563240230399 992.45522993586 30.225 2 -1.3534102014423262 0.3885856198485921 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 22811 10468 EVDYKFMKPTQ True H1975_Epitope_Rep1 1384.6696879175597 1384.6685899358602 45.22 2 -1.3534161278259806 0.3885856198485921 1.0 ['ENST00000457388.1_1_10:37626656-37627235:+|nuORF'] 67674 15331 LTFQERVL True PC9_epitope_Rep2 1004.5654805491998 1004.56438993586 64.251 2 -1.353417299557593 0.3885856198485921 1.0 ['ENST00000510413.5_2_4:151837871-151842384:-|nuORF'] 40630 4832 HTGEKPYHCTK True H1975_Epitope_Rep3 1299.6030053400698 1299.60190993586 23.712 2 -1.353517453324625 0.38858829316281357 1.0 ['ENSG00000136870|ENST00000339664|ZNF189', 'nc|ENSG00000136870|O75820-3|ZNF189', 'nc|ENSG00000136870|O75820-4|ZNF189', 'nc|ENSG00000136870|O75820-2|ZNF189'] 72969 3772 NCPSFALH True PC9_epitope_Rep4 887.3959726959499 887.39486993586 20.661 2 -1.353530331778761 0.38858829316281357 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 123870 25464 VKAVAWCP True NCI_RA007_Epitope_Rep4 872.4578446765199 872.45674993586 111.07 2 -1.3535498876590457 0.38859562828418553 1.0 ['ENST00000488829.1_1_9:89626569-89628063:+|nuORF', 'ENSG00000117399|ENST00000310955|CDC20'] 112744 13798 TPKLHENL True PC9_epitope_Rep6 950.51853035678 950.51742993586 64.875 2 -1.3535683852658096 0.38860296322956034 1.0 ['OR5D14|p.L84H|1|0.39|ENSG00000186113|chr11:55795806-55795806|T/A|missense_variant'] 131630 10467 VWDMPEHMDY True H1975_Epitope_Rep3 1321.51074474801 1321.5096499358601 45.323 2 -1.3537628360341163 0.388622977171579 1.0 ['ENSG00000170734|ENST00000372236|POLH'] 65245 13209 LSEFEEGSYGW True H1975_Epitope_Rep2 1302.54044756982 1302.5393499358602 55.936 2 -1.3537890870932665 0.388622977171579 1.0 ['ENSG00000173930|ENST00000310954|SLCO4C1'] 126474 12825 VPLWILMSFLC True H1975_Epitope_Rep3 1320.6974233188798 1320.6963299358601 54.551 2 -1.3538025784143228 0.388622977171579 1.0 ['ENSG00000269556|ENST00000600449|TMEM185A', 'ENSG00000226479|ENST00000426077|TMEM185B'] 87262 25348 QSRQLVVSPLV True PC9_epitope_Rep2 1224.71902106848 1224.7179299358602 103.18 2 -1.3538154824571489 0.388622977171579 1.0 ['ENSG00000066056|ENST00000372476|TIE1'] 68267 5447 LTRGWRVME True NCI_RA007_Epitope_Rep1 1146.59679776082 1146.59515490379 25.26 3 -1.3538439736943642 0.388622977171579 1.0 ['ABRA|p.K172R|1|0.27|ENSG00000174429|chr8:106769676-106769676|T/C|missense_variant'] 121152 5262 VGGGQKVR True PC9_epitope_Rep6 799.4664352142698 799.46532993586 28.026 2 -1.3538590319274235 0.388622977171579 1.0 ['ENSG00000106397|ENST00000223127|PLOD3', 'ENST00000478082.5_1_7:100856177-100861250:-|nuORF'] 20712 10936 EQKGQSMF True PC9_epitope_Rep1 953.4276667470499 953.42656993586 46.953 2 -1.3541436394433461 0.38867829466663467 1.0 ['ENSG00000170412|ENST00000392627|GPRC5C', 'nc|ENSG00000170412|Q9NQ84-2|GPRC5C'] 1554 12613 AEEYDEKTS True PC9_epitope_Rep5 1070.44039917538 1070.4393099358601 53.518 2 -1.354153921634059 0.3886856279164617 1.0 ['ENST00000470165.1_1_10:103347123-103356393:+|nuORF', 'ENSG00000166171|ENST00000370151|DPCD'] 114545 8564 TSIGNPVQV True PC9_epitope_Rep4 913.4868958753299 913.4863449679301 40.421 1 -1.354176364845749 0.3887122893300546 1.0 ['nc|ENSG00000186417|Q6ZMI3-2|GLDN', 'ENSG00000186417|ENST00000335449|GLDN'] 39454 18994 HNFHSFLY True PC9_epitope_Rep2 1063.4875645816699 1063.4864699358602 78.427 2 -1.3541885319919726 0.3887122893300546 1.0 ['nc|ENSG00000079459|P37268-3|FDFT1', 'nc|ENSG00000079459|P37268-2|FDFT1', 'ENSG00000079459|ENST00000220584|FDFT1', 'nc|ENSG00000079459|P37268-5|FDFT1', 'ENST00000531733.1_1_8:11666026-11667401:+|nuORF'] 96709 6882 SEQCAYITSW True H1975_Epitope_Rep3 1186.49647458286 1186.49482490379 31.43 3 -1.354244760715755 0.3887316172060552 1.0 ['ENST00000371711.4_1_20:48251667-48252051:-|nuORF'] 58833 20185 LFRIIKPRKVF True H1975_Epitope_Rep2 1415.91291027811 1415.91127490379 83.636 3 -1.3542804325562816 0.3887389494644164 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'nc|ENSG00000114127|Q8IZH2-3|XRN1'] 123254 23120 VHPLVYCP True PC9_epitope_Rep2 926.46840936022 926.46730993586 94.422 2 -1.3543765371528018 0.38875827655695233 1.0 ['ENST00000527587.5_1_20:57288690-57290379:+|nuORF', 'nc|ENSG00000215440|Q8NDH3-5|NPEPL1', 'nc|ENSG00000215440|Q8NDH3-4|NPEPL1', 'ENSG00000215440|ENST00000356091|NPEPL1', 'ENST00000525068.1_1_20:57288807-57289834:+|nuORF', 'ENST00000529976.5_1_20:57288690-57289536:+|nuORF'] 97139 5145 SFFFAYVGI True PC9_epitope_Rep4 1049.5222187548898 1049.52112993586 26.462 2 -1.3544139385119054 0.38876094518411897 1.0 ['ENST00000545024.1_5:69806308-69808341:+|nuORF'] 130031 10746 VTPRRISWRQR True NCI_RA007_Epitope_Rep5 1453.83784784489 1453.83674993586 47.972 2 -1.3544711711301074 0.38876094518411897 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4'] 81010 8615 PNRPRRGQ True PC9_epitope_Rep4 979.54239411919 979.54128993586 40.621 2 -1.3544871444089162 0.388768276738914 1.0 ['ENST00000373034.8_1_X:99664142-99664250:-|nuORF'] 139546 20645 YTLQIFEL True PC9_epitope_Rep4 1025.54334812229 1025.5422499358601 87.567 2 -1.3546921462010275 0.3888235858561627 1.0 ['ENSG00000101203|ENST00000358894|COL20A1', 'nc|ENSG00000101203|Q9P218-2|COL20A1', 'nc|ENSG00000101203|Q9P218-3|COL20A1', 'ENST00000479501.5_1_20:61926459-61943880:+|nuORF'] 30533 12983 GAINIRLCSVP True PC9_epitope_Rep3 1141.62776353593 1141.62666993586 54.966 2 -1.3547020969256864 0.3888289195931683 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 80155 21062 PKRWREELKR True PC9_epitope_Rep6 1396.80515073428 1396.8040499358601 93.838 2 -1.3547078530340533 0.3888289195931683 1.0 ['ENSG00000133302|ENST00000265140|SLF1', 'nc|ENSG00000133302|Q9BQI6-2|SLF1'] 12195 14657 DINEAGVRVL True PC9_epitope_Rep2 1084.58767254576 1084.58656993586 61.644 2 -1.3548321087563109 0.3888289195931683 1.0 ['ENST00000525522.5_1_11:494693-499199:-|nuORF', 'ENST00000525701.5_1_11:494693-500690:-|nuORF', 'ENSG00000023191|ENST00000354420|RNH1'] 97192 22043 SFIPREVG True H1975_Epitope_Rep1 903.48141657207 903.48030993586 91.689 2 -1.3548622506991146 0.3888289195931683 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 33655 9967 GLPEVENLSK True H1975_Epitope_Rep1 1084.57643915572 1084.57534993586 43.274 2 -1.3549367384460274 0.3888482435203953 1.0 ['RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'ITM2B-RB1|4|fusion', 'ITM2B-RB1|1|fusion'] 100862 6263 SLSFNTRLK True NCI_RA007_Epitope_Rep2 1064.59784330664 1064.59674993586 28.966 2 -1.3550202091136376 0.3888555734126508 1.0 ['ENST00000487841.5_1_6:166738023-166743732:-|nuORF', 'ENSG00000198818|ENST00000361731|SFT2D1'] 129533 19300 VTFWRSSPL True PC9_epitope_Rep2 1091.5763795860698 1091.5752899358602 79.612 2 -1.3551332211706675 0.3888582393859439 1.0 ['ENSG00000181004|ENST00000314218|BBS12'] 107570 9607 TAEGYLYVQ True H1975_Epitope_Rep2 1042.4971262058598 1042.4960299358602 41.929 2 -1.3551737717210177 0.3888582393859439 1.0 ['ENSG00000071205|ENST00000336498|ARHGAP10'] 73349 13164 NENNSSDHLP True PC9_epitope_Rep4 1125.46867961189 1125.4675899358601 58.532 2 -1.3554015684852991 0.3888655688945923 1.0 ['ENSG00000174606|ENST00000366962|ANGEL2', 'nc|ENSG00000174606|Q5VTE6-2|ANGEL2'] 24615 12146 FAPPDIAP True PC9_epitope_Rep2 826.4225047136199 826.42140993586 52.029 2 -1.3555303539079533 0.38888822266725825 1.0 ['RABEPK-PIK3R1|1|fusion', 'ENST00000517412.1_1_5:67522458-67569396:+|nuORF', 'PIK3R1|p.A360Efs*15|1|0.49|ENSG00000145675|chr5:68293151-68293152|-/ACGAG|frameshift_variant', 'PIK3R1|p.K575Rfs*24|1|0.22|ENSG00000145675|chr5:68295301-68295308|AAAGACGA/-|frameshift_variant', 'ENSG00000145675|ENST00000521381|PIK3R1', 'nc|ENSG00000145675|P27986-4|PIK3R1'] 93290 4441 RRRWSFFYCH True PC9_epitope_Rep6 1456.69349211032 1456.69183490379 24.237 3 -1.3555934936513323 0.38888822266725825 1.0 ['ENST00000374500.9_1_6:33385885-33386053:-|nuORF'] 57789 9861 LEPFRLQHN True NCI_RA007_Epitope_Rep1 1152.60399131624 1152.60288993586 42.36 2 -1.3556157230710482 0.38888822266725825 1.0 ['nc|ENSG00000122515|Q8NF64-3|ZMIZ2', 'nc|ENSG00000122515|Q8NF64-2|ZMIZ2', 'ENSG00000122515|ENST00000309315|ZMIZ2', 'ENST00000478045.5_1_7:44799906-44801193:+|nuORF', 'ENST00000463056.5_1_7:44799906-44807219:+|nuORF'] 62618 18767 LLVLRLRR True NCI_RA007_Epitope_Rep1 1037.71856757601 1037.7179749679299 77.141 1 -1.3556460147907459 0.38888822266725825 1.0 ['nc|ENSG00000253485|Q9Y5G8-2|PCDHGA5', 'ENSG00000253485|ENST00000518069|PCDHGA5'] 19669 11073 ELRWQKFVMFY True H1975_Epitope_Rep1 1545.78024142605 1545.7786049037902 47.555 3 -1.3556483821230632 0.38888822266725825 1.0 ['ENSG00000182771|ENST00000327946|GRID1'] 66340 13986 LSQRHKLQPRV True NCI_RA007_Epitope_Rep2 1360.8051507342798 1360.8040499358601 59.059 2 -1.3556834190503384 0.38888822266725825 1.0 ['DCDC1|p.I1627Kfs*18|1|0.15|ENSG00000170959|chr11:30894261-30894261|A/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8|DCDC1', 'ENSG00000170959|ENST00000684477|DCDC1', 'DCDC1|p.M1392*|1|0.16|ENSG00000170959|chr11:30905096-30905096|C/-|frameshift_variant', 'nc|ENSG00000170959|M0R2J8-2|DCDC1', 'nc|ENSG00000170959|M0R2J8-3|DCDC1'] 114986 5468 TTKESGEKMAH True NCI_RA007_Epitope_Rep2 1217.57103650545 1217.56992993586 25.888 2 -1.3556980812800374 0.38888822266725825 1.0 ['ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1'] 66982 10358 LTAEARIQA True H1975_Epitope_Rep1 971.5399940773499 971.53888993586 44.79 2 -1.35570198773856 0.38888822266725825 1.0 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 117250 17641 TYYEDDFSS True H1975_Epitope_Rep2 1125.4138500743697 1125.41327496793 73.173 1 -1.3557754732746168 0.3888955510253028 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4'] 8548 7171 ATYTYDEYKK True NCI_RA007_Epitope_Rep2 1280.5924831426798 1280.5913899358602 32.515 2 -1.3558671466287209 0.3888968824940048 1.0 ['ENSG00000171812|ENST00000397799|COL8A2'] 30362 17589 GAELPLAHCQL True PC9_epitope_Rep3 1150.58047899034 1150.57938993586 72.844 2 -1.355957836744263 0.3888968824940048 1.0 ['ENST00000422732.2_10:47098053-47098326:-|nuORF'] 88546 15679 RAGKRAAP True H1975_Epitope_Rep2 825.4933186684498 825.49222993586 65.47 2 -1.355980871391594 0.3888968824940048 1.0 ['ENST00000343958.8_1_12:95604994-95611239:-|nuORF', 'ENST00000451107.3_1_12:95475298-95611245:-|nuORF'] 65100 14731 LSDNFKRSF True PC9_epitope_Rep4 1112.56145779792 1112.56036993586 64.596 2 -1.3559811411115748 0.3888968824940048 1.0 ['ENSG00000139874|ENST00000267377|SSTR1'] 39384 14125 HLVKSEETV True PC9_epitope_Rep5 1040.55022440788 1040.54912993586 59.342 2 -1.3560037027694294 0.3888968824940048 1.0 ['nc|ENSG00000221957|P43632|KIR2DS4', 'ENST00000339924.12_2_19:55344219-55358662:+|nuORF'] 63594 20483 LPLLRVPLL True PC9_epitope_Rep6 1032.70593720364 1032.70484993586 91.508 2 -1.3560308579567084 0.3888968824940048 1.0 ['ENST00000296597.9_1_5:60240975-60241137:+|nuORF'] 115269 12746 TVDLIKYTM True H1975_Epitope_Rep3 1082.56818297114 1082.5670899358602 54.241 2 -1.3560461848477312 0.3888968824940048 1.0 ['ENSG00000072364|ENST00000265343|AFF4', 'AFF4|p.S1081Qfs*2|2|0.36|ENSG00000072364|chr5:132883460-132883463|AAGA/-|frameshift_variant'] 22441 5554 ETFVFKDQWFW True NCI_RA007_Epitope_Rep5 1531.7136013348695 1531.71250993586 28.049 2 -1.3560678005403468 0.3888968824940048 1.0 ['MMP16|p.M357T|1|0.2|ENSG00000156103|chr8:88116520-88116520|A/G|missense_variant'] 125763 19173 VNIETSHMI True PC9_epitope_Rep5 1042.51173072418 1042.5106299358602 78.786 2 -1.3560726544806612 0.3888968824940048 1.0 ['CA10|p.D79E|1|0.32|ENSG00000154975|chr17:51931032-51931032|G/T|missense_variant', 'ENSG00000154975|ENST00000451037|CA10'] 80307 6851 PLESRQQM True PC9_epitope_Rep2 987.4807649490699 987.47966993586 31.756 2 -1.3560844586619871 0.3888968824940048 1.0 ['nc|ENSG00000205268|Q13946-2|PDE7A', 'nc|ENSG00000205268|Q13946-3|PDE7A', 'ENSG00000205268|ENST00000401827|PDE7A'] 36615 22188 GVLLAKMKHP True PC9_epitope_Rep2 1092.6477707045199 1092.64666993586 90.832 2 -1.3561082328811764 0.3889042097816573 1.0 ['NEK3|p.A51G|2|0.26|ENSG00000136098|chr13:52154139-52154139|G/C|missense_variant'] 87207 18350 QSM[Oxidation]TERQAL True PC9_epitope_Rep1 1078.50770835334 1078.50660993586 75.372 2 -1.3563636788599656 0.388978813711737 1.0 ['nc|ENSG00000160584|Q9Y2K2-7|SIK3', 'nc|ENSG00000160584|Q9Y2K2-8|SIK3', 'nc|ENSG00000160584|Q9Y2K2|SIK3', 'ENSG00000160584|ENST00000445177|SIK3', 'ENST00000480468.1_1_11:116728475-116732017:-|nuORF', 'nc|ENSG00000160584|Q9Y2K2-6|SIK3'] 79322 24862 PGKPKADAK True NCI_RA007_Epitope_Rep5 910.5236157372199 910.52250993586 103.12 2 -1.3563809246730114 0.388978813711737 1.0 ['ENSG00000178764|ENST00000314393|ZHX2'] 66998 12074 LTAFVTLRL True PC9_epitope_Rep4 1032.6331661861998 1032.63206993586 54.248 2 -1.3564134159356003 0.38898613975348906 1.0 ['ENST00000415602.5_3_20:62694892-62695267:+|nuORF'] 122620 14354 VGTLPLGL True PC9_epitope_Rep5 768.47454028648 768.47344993586 60.213 2 -1.3564165513763784 0.38898880176486106 1.0 ['nc|ENSG00000170615|P58743-5|SLC26A5', 'nc|ENSG00000170615|P58743-6|SLC26A5', 'ENSG00000170615|ENST00000306312|SLC26A5', 'SLC26A5|p.V499Dfs*17|1|0.11|ENSG00000170615|chr7:103389025-103389026|CA/-|frameshift_variant', 'nc|ENSG00000170615|P58743-3|SLC26A5', 'nc|ENSG00000170615|P58743-2|SLC26A5'] 124432 24672 VLENLLVLA True PC9_epitope_Rep4 982.6062827320198 982.60518993586 103.39 2 -1.356438695781567 0.38898880176486106 1.0 ['ENSG00000125910|ENST00000246115|S1PR4'] 101334 14266 SLYRKSDP True PC9_epitope_Rep2 964.4977949121999 964.49668993586 60.141 2 -1.3564894171366466 0.38900811682472697 1.0 ['ENST00000462266.1_1_17:73316451-73322393:-|nuORF'] 125418 16476 VLTLTITT True PC9_epitope_Rep4 860.5218844017201 860.52078993586 71.346 2 -1.3565983928647019 0.3890327530810915 1.0 ['SLIT2|p.N183Tfs*60|1|0.21|ENSG00000145147|chr4:20486207-20486207|A/-|frameshift_variant'] 93876 15819 RVGGRGGGI True PC9_epitope_Rep6 827.4725832238698 827.47148993586 73.112 2 -1.356633145480685 0.3890327530810915 1.0 ['ENST00000403681.6_2_12:66218404-66218671:+|nuORF'] 13650 10855 DPVVADYK True H1975_Epitope_Rep3 905.44944773745 905.44834993586 46.836 2 -1.3566913988899993 0.3890327530810915 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENSG00000132170|ENST00000651735|PPARG', 'nc|ENSG00000132170|P37231-2|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF', 'nc|ENSG00000132170|P37231-3|PPARG'] 48041 19655 KALLFILWFT True NCI_RA007_Epitope_Rep5 1250.74271663518 1250.7410849037901 82.517 3 -1.3567344286650138 0.3890327530810915 1.0 ['Tigger1_dup324|chr1:83019440-83021751:-|3.250534866687885|0.2214501882032552|3.88|499.0|15|1|sense'] 61182 12028 LLDLPTVVP True H1975_Epitope_Rep3 965.57973363101 965.57862993586 51.426 2 -1.3567873937945067 0.3890327530810915 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 19781 13997 ELTFDFPI True PC9_epitope_Rep1 980.4854988929999 980.48440993586 58.677 2 -1.3568239755992921 0.38904007768573245 1.0 ['nc|ENSG00000168067|Q12851-2|MAP4K2', 'ENSG00000168067|ENST00000294066|MAP4K2'] 135995 13691 YFGSARSP True H1975_Epitope_Rep1 883.41881631551 883.41770993586 57.798 2 -1.356940428520025 0.3890453984199863 1.0 ['ENST00000361368.6_1_7:98625224-98626022:-|nuORF'] 93532 19924 RSPEKQLHP True H1975_Epitope_Rep2 1090.5883412521 1090.5872499358602 82.621 2 -1.356964347632417 0.3890453984199863 1.0 ['KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion', 'nc|ENSG00000063015|Q53EL9-2|SEZ6', 'nc|ENSG00000063015|Q53EL9-3|SEZ6', 'ENSG00000063015|ENST00000317338|SEZ6'] 28201 840 FRRCWLVFK True H1975_Epitope_Rep1 1253.6855531955696 1253.68390490379 4.4123 3 -1.3570308168823932 0.3890453984199863 1.0 ['ENSG00000206052|ENST00000382713|DOK6'] 67745 10348 LTGRGQGKK True H1975_Epitope_Rep3 943.5563128478299 943.55520993586 44.857 2 -1.3570568116064194 0.3890453984199863 1.0 ['RSAD2|p.I191T|1|0.5|ENSG00000134321|chr2:6886998-6886998|T/C|missense_variant'] 9363 11693 AVTVDGHPVA True PC9_epitope_Rep5 964.4977949121999 964.49668993586 49.973 2 -1.3571199396593314 0.38906471025438155 1.0 ['nc|ENSG00000135253|Q6ZWJ8|KCP', 'ENSG00000135253|ENST00000610776|KCP', 'ENST00000460528.1_1_7:128519440-128519819:-|nuORF', 'nc|ENSG00000135253|Q6ZWJ8-2|KCP', 'ENST00000492679.5_1_7:128505031-128520709:-|nuORF'] 120804 6177 VGDELFVVMEY True H1975_Epitope_Rep1 1299.6056906786698 1299.60458993586 28.829 2 -1.3572134957067834 0.389071994438918 1.0 ['ENSG00000180370|ENST00000327134|PAK2'] 30043 16658 FYKIRLPER True NCI_RA007_Epitope_Rep5 1220.7029770815197 1220.7018899358602 70.842 2 -1.3572235623638265 0.389071994438918 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant'] 9430 6483 AVVRHVEQVL True NCI_RA007_Epitope_Rep4 1148.6665915728 1148.66494490379 31.533 3 -1.3572481890454844 0.389071994438918 1.0 ['ENSG00000076201|ENST00000265562|PTPN23'] 140159 20515 YVTEEIKNP True PC9_epitope_Rep2 1091.54989005471 1091.5487899358602 84.341 2 -1.3573010741519826 0.389071994438918 1.0 ['ENSG00000155465|ENST00000674313|SLC7A7'] 131483 446 VVVAKPKG True NCI_RA007_Epitope_Rep1 796.5170738047999 796.51596993586 2.378 2 -1.3573669147079834 0.389071994438918 1.0 ['PDILT|p.R364Lfs*5|1|0.18|ENSG00000169340|chr16:20369515-20369517|TGC/A|frameshift_variant', 'ENSG00000169340|ENST00000302451|PDILT'] 63950 23268 LPYQRRYRERR True PC9_epitope_Rep5 1591.88077528603 1591.8796699358602 94.487 2 -1.3573754872562764 0.389071994438918 1.0 ['nc|ENSG00000179335|P49761-3|CLK3', 'ENSG00000179335|ENST00000395066|CLK3', 'nc|ENSG00000179335|P49761-2|CLK3', 'ENST00000454830.6_1_15:74908152-74912599:+|nuORF'] 56510 12031 LDTRIHLGPV True PC9_epitope_Rep1 1119.64004247179 1119.6389499358602 51.138 2 -1.357428659028789 0.389071994438918 1.0 ['ENST00000589881.5_1_18:32920403-32920517:-|nuORF'] 34075 16459 GNTLTSLK True NCI_RA007_Epitope_Rep2 832.46543215476 832.46432993586 68.75 2 -1.3574630630762332 0.389071994438918 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 90806 8697 RKSDLIKHQRI True NCI_RA007_Epitope_Rep5 1392.83136548212 1392.82972490379 40.119 3 -1.3575369840261775 0.389071994438918 1.0 ['ENSG00000075407|ENST00000685332|ZNF37A', 'ENST00000452075.7_1_10:43015418-43015709:-|nuORF'] 47030 19861 IVSEEIEYLL True PC9_epitope_Rep3 1206.63837070594 1206.63726993586 81.632 2 -1.357537029304673 0.389071994438918 1.0 ['ENSG00000133789|ENST00000318950|SWAP70', 'ENST00000524817.5_1_11:9685687-9762009:+|nuORF'] 103218 23894 SQRLRRQPE True PC9_epitope_Rep5 1168.64250208328 1168.64140993586 96.889 2 -1.3575410822089242 0.389071994438918 1.0 ['ENST00000564834.1_1_7:152161668-152162124:+|nuORF'] 4610 16652 ALAHKTLK True PC9_epitope_Rep1 880.54943656224 880.54832993586 68.882 2 -1.3575441004613247 0.389071994438918 1.0 ['ENSG00000187527|ENST00000342358|ATP13A5'] 137553 15948 YLRTHEFP True PC9_epitope_Rep3 1061.52942939365 1061.52832993586 66.489 2 -1.3576227429379626 0.389071994438918 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 92773 27086 RRKPRLTHWRT True H1975_Epitope_Rep2 1505.8803813632098 1505.87872490379 111.8 3 -1.3576364037338389 0.389071994438918 1.0 ['ENST00000380008.1_1_21:47251066-47256320:-|nuORF'] 62394 23504 LLRRRLRQWRW True NCI_RA007_Epitope_Rep5 1637.9855151380898 1637.98387490379 97.718 3 -1.3576988781200499 0.389071994438918 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 27238 6962 FLVLASDG True H1975_Epitope_Rep3 820.43306939732 820.43196993586 31.741 2 -1.3577418239116508 0.389071994438918 1.0 ['ENSG00000172840|ENST00000311765|PDP2'] 93745 9285 RTRRRRVRDPW True NCI_RA007_Epitope_Rep1 1552.8923430292396 1552.89124993586 40.111 2 -1.357815476610302 0.389071994438918 1.0 ['ENST00000401044.7_1_1:59134235-59156019:-|nuORF', 'nc|ENSG00000162601|Q5VVJ2-2|MYSM1', 'ENSG00000162601|ENST00000472487|MYSM1'] 121703 18737 VGLNVFLEKNK True H1975_Epitope_Rep3 1259.7237720957498 1259.72266993586 78.576 2 -1.3579639813938575 0.389071994438918 1.0 ['ENST00000512790.5_1_5:112197073-112227301:+|nuORF', 'nc|ENSG00000153037|P09132-2|SRP19', 'ENSG00000153037|ENST00000505459|SRP19'] 96 6062 AAAQGVKR True PC9_epitope_Rep5 799.46643521427 799.46532993586 28.308 2 -1.3579663567464348 0.389071994438918 1.0 ['ENST00000392161.3_1_19:36900716-36909439:-|nuORF'] 106627 18579 SWQRKKRKDPL True NCI_RA007_Epitope_Rep4 1440.8313654821197 1440.82972490379 80.373 3 -1.3580021229019585 0.38909130132553515 1.0 ['ENST00000477392.1_1_7:150130835-150139740:+|nuORF'] 105745 6444 SVHTPPGPEAS True NCI_RA007_Epitope_Rep3 1077.5090878718897 1077.50798993586 32.365 2 -1.3581309158043386 0.38912855910267474 1.0 ['ENST00000476163.5_1_1:6947993-6948239:+|nuORF'] 96610 7648 SEMFNIPWDNP True H1975_Epitope_Rep1 1348.5757875327197 1348.57468993586 34.396 2 -1.3581870797006306 0.38912855910267474 1.0 ['ENSG00000155761|ENST00000336338|SPAG17'] 48125 3644 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 19.049 3 -1.358237108488247 0.38912855910267474 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 103953 22004 SRPRKPHK True PC9_epitope_Rep2 1004.5991807193199 1004.59808993586 90.112 2 -1.3582722732222865 0.38912855910267474 1.0 ['ENSG00000283199|ENST00000636427|C13orf46'] 18425 8765 EKFDRSSW True NCI_RA007_Epitope_Rep3 1053.4879585044898 1053.48686993586 41.565 2 -1.35827724787307 0.38912855910267474 1.0 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 97137 4320 SFFFAYVGI True PC9_epitope_Rep2 1049.5222187548898 1049.52112993586 21.954 2 -1.3583258106310432 0.38912855910267474 1.0 ['ENST00000545024.1_5:69806308-69808341:+|nuORF'] 63165 21692 LNSMKKDL True PC9_epitope_Rep2 947.51100244819 947.50990993586 88.916 2 -1.3583432717674129 0.38912855910267474 1.0 ['ENSG00000128849|ENST00000281282|CGNL1', 'nc|ENSG00000128849|Q0VF96-2|CGNL1'] 136821 9853 YITNEERK True PC9_epitope_Rep3 1051.52982331647 1051.5287299358602 42.859 2 -1.3583884789437644 0.38912855910267474 1.0 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96', 'CD96|p.P408Lfs*10|1|0.26|ENSG00000153283|chr3:111606786-111606786|C/-|frameshift_variant'] 83865 22872 QEHKHHMV True NCI_RA007_Epitope_Rep5 1044.4923326922801 1044.49122993586 95.196 2 -1.3584013671194073 0.38912855910267474 1.0 ['ENSG00000179046|ENST00000682553|TRIML2', 'TRIML2|p.K197Vfs*25|1|0.25|ENSG00000179046|chr4:188099066-188099067|TT/-|frameshift_variant', 'nc|ENSG00000179046|Q8N7C3-2|TRIML2', 'ENST00000511771.1_1_4:189020146-189026726:-|nuORF'] 140785 13076 YYRRRHRHERT True H1975_Epitope_Rep3 1628.85087214008 1628.8497699358602 55.539 2 -1.3584021673797806 0.38912855910267474 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 59106 14442 LGEGGQTVTK True PC9_epitope_Rep3 988.5189242796 988.51782993586 60.657 2 -1.3584276498378276 0.38913121629718395 1.0 ['FAM234A|p.P533Qfs*81|1|0.27|ENSG00000167930|chr16:264957-264957|G/-|frameshift_variant'] 120745 8299 VGAVNVAK True NCI_RA007_Epitope_Rep1 756.4493881678 756.44828993586 36.282 2 -1.3584723431492651 0.38913121629718395 1.0 ['ENSG00000167676|ENST00000301286|PLIN4'] 36486 18091 GVIYLEMDLI True PC9_epitope_Rep1 1164.6100477831199 1164.60841490379 74.381 3 -1.3585678765888278 0.38917111979104263 1.0 ['nc|ENSG00000140563|Q6DN12-2|MCTP2', 'ENSG00000140563|ENST00000357742|MCTP2', 'ENST00000456504.5_1_15:94858078-95022260:+|nuORF', 'nc|ENSG00000140563|Q6DN12-4|MCTP2', 'nc|ENSG00000140563|Q6DN12-3|MCTP2'] 119651 11193 VESHWKVC True PC9_epitope_Rep6 986.4643866089399 986.46328993586 54.027 2 -1.3586426447626585 0.38917111979104263 1.0 ['nc|ENSG00000106052|Q86VP1-2|TAX1BP1', 'ENSG00000106052|ENST00000396319|TAX1BP1', 'nc|ENSG00000106052|Q86VP1-3|TAX1BP1', 'nc|ENSG00000106052|Q86VP1-4|TAX1BP1'] 20108 11508 ENKEFKIHL True NCI_RA007_Epitope_Rep1 1156.6240580544797 1156.62296993586 48.73 2 -1.358756335855937 0.38917111979104263 1.0 ['ENSG00000221886|ENST00000408953|FAM200C'] 32510 20756 GGPHEHPS True H1975_Epitope_Rep2 816.3514650316799 816.35036993586 85.949 2 -1.358777642554594 0.38917111979104263 1.0 ['ENST00000600019.5_1_19:50060962-50063200:-|nuORF', 'ENST00000599425.5_1_19:50060962-50063306:-|nuORF'] 124938 14345 VLLWKRTWWCH True NCI_RA007_Epitope_Rep2 1526.7968945497 1526.79578993586 60.464 2 -1.3587896112888016 0.38917111979104263 1.0 ['ENST00000463441.5_1_7:150020582-150023090:+|nuORF'] 72561 17834 MVKKMKKR True NCI_RA007_Epitope_Rep4 1047.64091150227 1047.63980993586 77.219 2 -1.358810591454886 0.38917111979104263 1.0 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 128020 14588 VRREYEHF True H1975_Epitope_Rep1 1134.5570411238198 1134.55594993586 61.32 2 -1.3588164839924346 0.38917111979104263 1.0 ['ENSG00000167880|ENST00000301607|EVPL', 'EVPL|p.L696Efs*65|1|0.15|ENSG00000167880|chr17:76015052-76015053|GC/-|frameshift_variant', 'ENST00000587569.5_1_17:74014525-74023279:-|nuORF', 'ENSG00000214860|ENST00000399134|EVPLL'] 44336 19456 IMFQNRSI True PC9_epitope_Rep3 1007.5222358382299 1007.52112993586 80.065 2 -1.3588264392377796 0.38917111979104263 1.0 ['ENST00000361320.4_1_10:68686133-68686247:+|nuORF'] 7700 8541 ASQGNQNN True H1975_Epitope_Rep2 831.34710792723 831.34600993586 37.809 2 -1.3588504991195742 0.38917111979104263 1.0 ['ENSG00000109944|ENST00000227349|JHY'] 78898 13686 PEVMLDFIDWL True NCI_RA007_Epitope_Rep2 1376.6686252883999 1376.66752993586 57.878 2 -1.3588516321305668 0.38917111979104263 1.0 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 121740 17438 VGLRWRPL True NCI_RA007_Epitope_Rep1 995.6028691174299 995.60176993586 71.965 2 -1.358860781000068 0.38917111979104263 1.0 ['ENST00000592685.5_1_19:10570095-10570353:+|nuORF', 'ENST00000591971.5_1_19:10570113-10572229:+|nuORF'] 11344 20051 DFADNIKV True PC9_epitope_Rep1 920.46034677432 920.45924993586 81.952 2 -1.358900803878793 0.38917111979104263 1.0 ['ENST00000467586.5_1_17:74084367-74085867:-|nuORF'] 6966 11472 AQNVDWPVVY True H1975_Epitope_Rep1 1189.5767735088898 1189.57566993586 49.109 2 -1.358922851719003 0.3891784383499275 1.0 ['KCNH5|p.I35N|1|0.32|ENSG00000140015|chr14:63016924-63016924|A/T|missense_variant'] 76289 7031 NSDRTSTVQNL True PC9_epitope_Rep3 1233.5949427541698 1233.5938499358601 32.056 2 -1.3590035318853244 0.3892083572934637 1.0 ['ENSG00000102104|ENST00000379984|RS1'] 137529 21487 YLQQWLKAFV True PC9_epitope_Rep6 1294.7073937556197 1294.70575490379 95.523 3 -1.359128402998994 0.3892083572934637 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 79558 13290 PGSTSRAR True NCI_RA007_Epitope_Rep2 830.43586336198 830.43531496793 56.331 1 -1.359186726999028 0.3892083572934637 1.0 ['ENST00000532788.1_1_11:615122-615224:-|nuORF'] 85616 10524 QLNRRFQFL True NCI_RA007_Epitope_Rep2 1220.6778249628398 1220.67672993586 45.533 2 -1.359286273323009 0.3892083572934637 1.0 ['ENSG00000108592|ENST00000427159|FTSJ3', 'ENST00000582476.1_1_17:61903877-61904262:-|nuORF', 'ENST00000577263.5_1_17:61903352-61904262:-|nuORF'] 59677 20515 LGTEASKVCSS True NCI_RA007_Epitope_Rep5 1080.5121246469998 1080.51102993586 85.853 2 -1.3592958375329809 0.3892083572934637 1.0 ['ENSG00000144724|ENST00000474889|PTPRG', 'nc|ENSG00000144724|P23470-2|PTPRG'] 87995 3225 QVRTWDFPR True NCI_RA007_Epitope_Rep2 1203.6148903531098 1203.61324490379 17.2 3 -1.3593027585920894 0.3892083572934637 1.0 ['ENST00000311573.9_1_1:155649295-155658075:-|nuORF'] 90394 15421 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 64.474 3 -1.359320927193162 0.3892083572934637 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 3845 9136 AGYVEGGK True PC9_epitope_Rep1 779.3813681776298 779.38026993586 39.993 2 -1.3593452296120112 0.3892083572934637 1.0 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 34077 15845 GNTLTSLK True NCI_RA007_Epitope_Rep4 832.46543215476 832.46432993586 68.809 2 -1.3593481883337595 0.3892083572934637 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 35295 16129 GSRGQPRQGSP True NCI_RA007_Epitope_Rep5 1125.56391740941 1125.56227490379 68.774 3 -1.3593623601493454 0.38921101181206125 1.0 ['ENSG00000159217|ENST00000290341|IGF2BP1'] 55778 9326 LDEFQKKWH True NCI_RA007_Epitope_Rep1 1229.61930702721 1229.61820993586 40.271 2 -1.3593690095530995 0.38921101181206125 1.0 ['CON__P15497'] 79284 24714 PGHPRKRAGR True PC9_epitope_Rep4 1130.6533415504998 1130.65224993586 103.56 2 -1.359493526215534 0.3892329623728692 1.0 ['ENSG00000165886|ENST00000370664|UBTD1'] 61776 24606 LLKILLVLHT True H1975_Epitope_Rep2 1161.7849158003298 1161.78328490379 101.2 3 -1.3595383746756236 0.3892329623728692 1.0 ['ENST00000342756.9_1_4:57357643-57361536:+|nuORF'] 133625 24152 WKFRAMRKI True NCI_RA007_Epitope_Rep2 1234.7121022965798 1234.7110099358601 101.45 2 -1.3595864563687592 0.3892329623728692 1.0 ['ENST00000530606.1_1_10:77055306-77055468:+|nuORF'] 48645 13710 KEKLPLMC True NCI_RA007_Epitope_Rep4 960.5136453004799 960.51254993586 59.957 2 -1.359649085457558 0.3892402788758715 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 15394 9432 EALRLSPVP True PC9_epitope_Rep1 980.5654805492 980.56438993586 41.138 2 -1.3596984233319933 0.3892595742641862 1.0 ['ENSG00000176723|ENST00000315678|ZNF843'] 58883 18863 LFTDLFDR True PC9_epitope_Rep3 1025.51819600361 1025.5170899358602 77.78 2 -1.3598137078973238 0.3893174576555425 1.0 ['nc|ENSG00000151292|Q9Y6M4-6|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-5|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-3|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-4|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-2|CSNK1G3', 'ENSG00000151292|ENST00000696905|CSNK1G3', 'ENSG00000133275|ENST00000255641|CSNK1G2'] 130932 5029 VVILVVIAL True NCI_RA007_Epitope_Rep1 937.6575900288899 937.65704496793 23.646 1 -1.3598314860801015 0.3893174576555425 1.0 ['ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 15807 12741 EDIFWPCTL True PC9_epitope_Rep2 1122.50558271458 1122.5044899358602 54.312 2 -1.3598419234599062 0.3893174576555425 1.0 ['ENST00000441302.6_1_3:39139484-39139703:-|nuORF'] 107994 27216 TCWEKICP True PC9_epitope_Rep3 978.4303095993399 978.42920993586 112.0 2 -1.3598779719380891 0.38933208758564514 1.0 ['ENSG00000131389|ENST00000622186|SLC6A6', 'nc|ENSG00000131389|P31641-2|SLC6A6', 'SLC6A6|p.L206Cfs*11|1|0.18|ENSG00000131389|chr3:14457966-14457966|T/-|frameshift_variant'] 85294 28310 QKVVEMKWDQ True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 117.93 3 -1.359884312938666 0.38933208758564514 1.0 ['ENSG00000187957|ENST00000341772|DNER', 'DNER|p.G183W|2|0.35|ENSG00000187957|chr2:229591618-229591618|C/A|missense_variant'] 19447 13415 ELPSFAVKG True H1975_Epitope_Rep2 946.5123823471798 946.51128993586 56.736 2 -1.359974953633666 0.38937533688686593 1.0 ['nc|ENSG00000152582|Q9C093-2|SPEF2', 'ENSG00000152582|ENST00000356031|SPEF2', 'SPEF2|p.D702Mfs*8|1|0.22|ENSG00000152582|chr5:35697755-35697755|T/-|frameshift_variant', 'ENST00000503074.1_1_5:35659153-35697983:+|nuORF'] 34063 18228 GNRLPANRR True NCI_RA007_Epitope_Rep5 1052.59515796804 1052.59406993586 76.922 2 -1.3600323931038298 0.3893946290395994 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 63846 13725 LPTNTPKSI True NCI_RA007_Epitope_Rep3 969.54949613189 969.54838993586 61.308 2 -1.360065590090817 0.38941392073017356 1.0 ['ENST00000535111.5_2_11:71779146-71779221:-|nuORF'] 44520 11063 IPAGSYGS True H1975_Epitope_Rep3 750.3548190766201 750.3542749679301 47.645 1 -1.3600957125401172 0.3894212341893446 1.0 ['NCDN|p.S302Y|1|0.35|ENSG00000020129|chr1:35561056-35561056|C/A|missense_variant'] 30707 19000 GALRTTAWKP True PC9_epitope_Rep2 1099.61382772395 1099.6127299358602 78.45 2 -1.360108800484796 0.38942388309977244 1.0 ['ENST00000560589.5_1_15:70352876-70358370:-|nuORF'] 29540 26240 FVIFMFFLN True PC9_epitope_Rep1 1176.6041745570399 1176.60253490379 106.33 3 -1.360109672692565 0.38942388309977244 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 134800 12689 WYNRLRITWDP True NCI_RA007_Epitope_Rep1 1518.7731818996597 1518.77208993586 53.34 2 -1.3601680769821305 0.38942918053991904 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF'] 98600 12508 SINPVTLRRW True NCI_RA007_Epitope_Rep5 1240.7040397106798 1240.70294993586 54.767 2 -1.3602051200645653 0.38942918053991904 1.0 ['ENSG00000160191|ENST00000291539|PDE9A', 'nc|ENSG00000160191|O76083-12|PDE9A', 'nc|ENSG00000160191|O76083-15|PDE9A', 'nc|ENSG00000160191|O76083-14|PDE9A', 'nc|ENSG00000160191|O76083-5|PDE9A', 'nc|ENSG00000160191|O76083-2|PDE9A', 'nc|ENSG00000160191|O76083-13|PDE9A', 'nc|ENSG00000160191|O76083-8|PDE9A', 'nc|ENSG00000160191|O76083-6|PDE9A', 'nc|ENSG00000160191|O76083-16|PDE9A', 'nc|ENSG00000160191|O76083-10|PDE9A', 'ENST00000470987.5_1_21:44117526-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-3|PDE9A', 'nc|ENSG00000160191|O76083-4|PDE9A', 'nc|ENSG00000160191|O76083-11|PDE9A', 'nc|ENSG00000160191|O76083-9|PDE9A', 'ENST00000489319.5_1_21:44178904-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-7|PDE9A'] 15874 12931 EDNARFLL True PC9_epitope_Rep3 976.4977949122 976.49668993586 54.763 2 -1.3602345069818598 0.38942918053991904 1.0 ['ENSG00000152315|ENST00000282146|KCNK13'] 90936 14266 RLFFPEDP True PC9_epitope_Rep1 1019.5076313199098 1019.50652993586 59.698 2 -1.3602390637586363 0.38942918053991904 1.0 ['ENSG00000175309|ENST00000308158|PHYKPL', 'ENST00000493197.5_1_5:177656705-177658704:-|nuORF', 'ENST00000511716.1_1_5:177653644-177659518:-|nuORF'] 86045 8059 QPLISTHDHR True PC9_epitope_Rep4 1202.6156186291 1202.6145299358602 38.451 2 -1.3602579413430607 0.3894364932031858 1.0 ['ENST00000288937.6_1_11:6703207-6703348:-|nuORF'] 88761 10438 RDGDRLWYENP True PC9_epitope_Rep4 1419.6531263366296 1419.6520299358601 47.861 2 -1.3602696583699445 0.3894438056912906 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 28288 9315 FRWLYEKFRYP True NCI_RA007_Epitope_Rep2 1603.8299684997899 1603.82833490379 40.841 3 -1.3603430394483844 0.38945843014203935 1.0 ['ENSG00000167904|ENST00000434581|TMEM68'] 93470 7484 RSFGGGCH True NCI_RA007_Epitope_Rep5 819.3446058294301 819.34350993586 35.468 2 -1.3603627885727174 0.38945843014203935 1.0 ['ENSG00000184708|ENST00000330125|EIF4ENIF1', 'nc|ENSG00000184708|Q9NRA8-3|EIF4ENIF1'] 61181 12031 LLDLPTVVP True H1975_Epitope_Rep1 965.57973363101 965.57862993586 51.287 2 -1.360425201815021 0.3894617088797078 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 53200 12746 KTCSMKVL True PC9_epitope_Rep4 908.4823451722 908.48124993586 56.889 2 -1.3604490530951872 0.3894617088797078 1.0 ['CRYBG1|p.H1570L|2|0.16|ENSG00000112297|chr6:106530306-106530306|A/T|missense_variant'] 57884 5060 LEQGEPLWT True NCI_RA007_Epitope_Rep1 1071.5236753068698 1071.52256993586 23.767 2 -1.3604949488867062 0.3894617088797078 1.0 ['ENST00000599671.1_1_19:52399719-52400225:-|nuORF', 'ENSG00000198093|ENST00000354957|ZNF649'] 21632 16648 ERTHKNLSDME True H1975_Epitope_Rep2 1358.6248629834597 1358.62376993586 69.267 2 -1.3605351982317608 0.3894617088797078 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 104522 17075 SSRLILEKHVQ True NCI_RA007_Epitope_Rep3 1308.7513838259201 1308.75028993586 75.032 2 -1.3605736846001184 0.3894617088797078 1.0 ['ENSG00000143373|ENST00000336715|ZNF687', 'ENST00000426871.1_1_1:151262664-151263682:+|nuORF'] 68960 21082 LVGEVDILDR True H1975_Epitope_Rep1 1127.6186383208699 1127.61754993586 87.567 2 -1.3605937343804118 0.3894617088797078 1.0 ['nc|ENSG00000050438|Q2Y0W8-4|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-5|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-3|SLC4A8', 'ENST00000319957.10_1_12:51818771-51890959:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-2|SLC4A8', 'ENSG00000050438|ENST00000453097|SLC4A8', 'ENST00000547697.6_1_12:51844670-51855120:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-8|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-6|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-7|SLC4A8'] 126881 20847 VPTQPLLKAHP True PC9_epitope_Rep1 1199.70264272835 1199.7015499358602 85.014 2 -1.360616546757175 0.3894617088797078 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'nc|ENSG00000166349|P15918-2|RAG1'] 118012 13494 VASPREEL True PC9_epitope_Rep3 899.47124581119 899.47014993586 56.955 2 -1.3606690072562353 0.389469020190166 1.0 ['ENST00000582319.5_1_17:72477795-72480262:+|nuORF', 'nc|ENSG00000167851|Q9UGN4-3|CD300A', 'nc|ENSG00000167851|Q9UGN4-2|CD300A', 'ENSG00000167851|ENST00000360141|CD300A'] 72970 3856 NCPSFALH True PC9_epitope_Rep4 887.3959726959499 887.39486993586 21.005 2 -1.3611760940247803 0.38959141639124395 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 117305 14780 VAAERKSL True PC9_epitope_Rep5 872.5079656730799 872.50686993586 61.85 2 -1.3611801184830117 0.38959141639124395 1.0 ['ENST00000346416.6_1_20:31984877-31989364:-|nuORF'] 102514 11575 SPYWEERIFYL True NCI_RA007_Epitope_Rep1 1501.72416601857 1501.7230699358602 48.993 2 -1.3613505470324863 0.38964662491467983 1.0 ['nc|ENSG00000083799|Q9NQC7-2|CYLD', 'ENSG00000083799|ENST00000427738|CYLD', 'ENST00000569891.5_1_16:50783609-50818363:+|nuORF', 'CYLD|p.I769Ffs*7|1|0.67|ENSG00000083799|chr16:50792654-50792654|A/-|frameshift_variant'] 75293 6322 NPTKYTFFP True H1975_Epitope_Rep3 1113.54949613189 1113.54838993586 29.311 2 -1.36154424045791 0.38966590827445813 1.0 ['ENSG00000179598|ENST00000321560|PLD6', 'ENST00000427497.3_1_17:17106083-17118331:-|nuORF'] 65627 8384 LSGPLSVTGV True PC9_epitope_Rep2 928.52294703088 928.52184993586 37.621 2 -1.3616004185649058 0.38967321670199134 1.0 ['ENST00000477438.1_1_22:44564113-44564555:+|nuORF'] 6441 15903 APSNTFVAP True PC9_epitope_Rep5 902.4497820906199 902.44923496793 66.161 1 -1.3616527680375892 0.38968783303198307 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 128530 7677 VSGRKSPVL True NCI_RA007_Epitope_Rep3 941.5658149023699 941.56470993586 37.316 2 -1.3616797168367096 0.38968783303198307 1.0 ['CON__ENSEMBL:ENSBTAP00000034412'] 119400 7813 VEPAADKDW True H1975_Epitope_Rep1 1029.47672511445 1029.47562993586 35.007 2 -1.361714615790324 0.3896951409344541 1.0 ['ENSG00000182791|ENST00000333861|CCDC87'] 81853 21048 PSICKRKKVWL True PC9_epitope_Rep6 1356.8063966042398 1356.8052899358602 93.782 2 -1.3618078940390446 0.38972639645572654 1.0 ['nc|ENSG00000153246|Q13018-2|PLA2R1', 'ENSG00000153246|ENST00000283243|PLA2R1'] 52959 20883 KRLSWKIHM True NCI_RA007_Epitope_Rep5 1197.68046781513 1197.67882490379 87.322 3 -1.3618853289213182 0.3897649580324964 1.0 ['ENSG00000016391|ENST00000315251|CHDH'] 27427 23282 FNIHPPLKR True PC9_epitope_Rep2 1120.65054758584 1120.64944993586 95.038 2 -1.36188859939415 0.3897649580324964 1.0 ['ENST00000441284.5_2_13:46917522-46942212:-|nuORF', 'nc|ENSG00000102445|Q9H714-6|RUBCNL', 'nc|ENSG00000102445|Q9H714-3|RUBCNL', 'nc|ENSG00000102445|Q9H714-4|RUBCNL', 'ENSG00000102445|ENST00000429979|RUBCNL'] 121876 9253 VGPEAGVV True PC9_epitope_Rep2 726.39120458534 726.39065496793 40.93 1 -1.361920763249348 0.38976759779211917 1.0 ['ENST00000366718.5_1_1:228332177-228332423:+|nuORF'] 18709 6721 ELDFYVKGMPI True H1975_Epitope_Rep1 1310.6580606046998 1310.6569699358602 30.896 2 -1.3619283603548664 0.38976759779211917 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 62884 21846 LMRNAMIKI True PC9_epitope_Rep1 1088.61984170452 1088.61874993586 88.84 2 -1.3621565857590274 0.38976821033475406 1.0 ['ENST00000541981.5_1_12:32145534-32145603:+|nuORF'] 136599 3484 YHYRLDWLMWF True NCI_RA007_Epitope_Rep1 1628.7598403346399 1628.7581849037902 17.464 3 -1.362165169044392 0.38976821033475406 1.0 ['ENSG00000103227|ENST00000262301|LMF1', 'ENST00000570168.1_1_16:919345-920044:-|nuORF', 'ENST00000569516.5_1_16:904534-921479:-|nuORF', 'nc|ENSG00000103227|Q96S06-2|LMF1'] 115599 8736 TVIGSKLN True NCI_RA007_Epitope_Rep4 830.4861675993401 830.48506993586 40.396 2 -1.3621908406102574 0.38976821033475406 1.0 ['ENST00000535387.5_2_9:95072482-95076565:-|nuORF'] 44371 14871 INALRRCFFWR True NCI_RA007_Epitope_Rep1 1480.7873924951598 1480.7862899358602 61.903 2 -1.3622026314182474 0.38976821033475406 1.0 ['nc|ENSG00000001626|P13569-2|CFTR', 'ENSG00000001626|ENST00000003084|CFTR', 'CFTR|p.S858Efs*38|1|0.24|ENSG00000001626|chr7:117595007-117595008|-/A|frameshift_variant', 'nc|ENSG00000001626|P13569-3|CFTR'] 92307 21992 RQLLWVKSY True PC9_epitope_Rep4 1191.67642798051 1191.67477490379 92.813 3 -1.3622121535225669 0.38976821033475406 1.0 ['ENST00000246868.6_1_7:66452970-66453129:-|nuORF'] 90538 23606 RKFGRFLKMI True PC9_epitope_Rep5 1294.7696171726998 1294.76797490379 95.779 3 -1.3622593344035745 0.3897828221152695 1.0 ['ENST00000395603.7_1_X:76907692-76907743:-|nuORF'] 108124 7208 TDPCQPYRSA True H1975_Epitope_Rep2 1136.49205790876 1136.4909699358602 32.66 2 -1.3622687225383998 0.3897828221152695 1.0 ['ENSG00000268043|ENST00000698835|NBPF12', 'ENST00000491285.1_1:146215077-146250826:-|nuORF'] 52644 12607 KQEVKEAPP True PC9_epitope_Rep1 1024.5553097883196 1024.5542099358602 53.361 2 -1.3623197808588714 0.3898020999197864 1.0 ['nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 99894 9372 SLHRQLSDP True H1975_Epitope_Rep1 1051.5410567065098 1051.53994993586 40.959 2 -1.3624284718097976 0.38982868225406747 1.0 ['ENSG00000125998|ENST00000374408|FAM83C', 'FAM83C|p.P392H|1|0.74|ENSG00000125998|chr20:35287604-35287604|G/T|missense_variant'] 110718 25578 TKEILDTALK True PC9_epitope_Rep1 1130.65468947642 1130.65358993586 103.4 2 -1.3624330500352786 0.38982868225406747 1.0 ['ENSG00000100596|ENST00000216484|SPTLC2'] 42046 5357 IEEDILSEPEP True NCI_RA007_Epitope_Rep2 1269.5976280927698 1269.5965299358602 25.457 2 -1.362441667945666 0.3898359870705136 1.0 ['ENSG00000047578|ENST00000261588|KATNIP'] 57883 14195 LEQFRVAHED True PC9_epitope_Rep3 1242.59929985862 1242.59820993586 59.686 2 -1.362454869886219 0.3898386247186707 1.0 ['ENSG00000164610|ENST00000297157|RP9'] 19561 10050 ELRAFLRHYEA True H1975_Epitope_Rep3 1403.73098273451 1403.72988993586 43.693 2 -1.362457779478595 0.3898386247186707 1.0 ['ENSG00000184261|ENST00000327876|KCNK12'] 108056 24546 TDIFKKKKRK True NCI_RA007_Epitope_Rep1 1290.81359015966 1290.8124899358602 101.68 2 -1.3624874617428473 0.38984126224052484 1.0 ['nc|nan|Q8NDD1-6|C1orf131', 'ENSG00000143633|ENST00000366649|C1orf131', 'nc|nan|Q8NDD1-5|C1orf131'] 93031 17779 RRRHAFRRQA True NCI_RA007_Epitope_Rep4 1352.77625064784 1352.77514993586 76.971 2 -1.3625070288831287 0.38984126224052484 1.0 ['nc|ENSG00000022567|Q5BKX6-2|SLC45A4', 'nc|ENSG00000022567|Q5BKX6|SLC45A4', 'nc|ENSG00000022567|Q5BKX6-3|SLC45A4', 'ENSG00000022567|ENST00000517878|SLC45A4'] 82537 24633 PVFRITLPVLA True PC9_epitope_Rep1 1224.7594293284799 1224.7588749679298 99.626 1 -1.3625463762492693 0.3898485664691447 1.0 ['ENSG00000174951|ENST00000645652|FUT1'] 45122 9617 IQTGVQLAPA True NCI_RA007_Epitope_Rep4 996.5603951687599 996.55928993586 43.842 2 -1.362660639256347 0.38985587052288834 1.0 ['nc|ENSG00000290942|Q86YQ2|BPIFA4P'] 125877 16600 VNSEEIVRLL True PC9_epitope_Rep3 1170.66083748602 1170.65920490379 68.989 3 -1.3627880354447104 0.38988975209183735 1.0 ['ENSG00000165125|ENST00000359396|TRPV6', 'nc|ENSG00000127412|Q9NQA5-2|TRPV5', 'ENSG00000127412|ENST00000265310|TRPV5'] 41518 9140 IDAQDRVLLLH True H1975_Epitope_Rep1 1291.72483472491 1291.72372993586 40.063 2 -1.362791855676892 0.38988975209183735 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 67854 20023 LTKDMEYF True PC9_epitope_Rep1 1045.47903361357 1045.4779299358602 81.845 2 -1.3628188764439049 0.38988975209183735 1.0 ['nc|ENSG00000103415|P30519-2|HMOX2', 'ENSG00000103415|ENST00000570646|HMOX2'] 62529 12693 LLSWGPTA True PC9_epitope_Rep6 843.4490538146299 843.44794993586 60.301 2 -1.362836468923823 0.38989238816868366 1.0 ['ENST00000283921.4_1_7:27211115-27211478:-|nuORF'] 81556 20952 PRFPGRHLFL True PC9_epitope_Rep5 1238.70364578786 1238.7025499358601 85.651 2 -1.3628417438662674 0.38989238816868366 1.0 ['ENST00000448759.1_1_1:43352460-43353038:-|nuORF'] 58739 18604 LFLLFWFR True NCI_RA007_Epitope_Rep5 1140.64842232752 1140.6473299358602 78.373 2 -1.3629570757702796 0.3899116612003543 1.0 ['ENSG00000181652|ENST00000639579|ATG9B', 'nc|ENSG00000181652|Q674R7-2|ATG9B'] 100038 12896 SLKKRHFFR True PC9_epitope_Rep2 1217.71454482473 1217.7128849037902 54.903 3 -1.3630271950087556 0.3899426766075083 1.0 ['nc|ENSG00000065923|Q96T83|SLC9A7', 'ENSG00000065923|ENST00000616978|SLC9A7'] 1733 5742 AEGRSLASV True PC9_epitope_Rep2 888.46649478392 888.46538993586 27.478 2 -1.3631376426161035 0.3899426766075083 1.0 ['ENST00000205194.4_1_19:55998332-55998500:+|nuORF'] 122635 14628 VGTNGGLK True NCI_RA007_Epitope_Rep3 744.41300265908 744.4124549679301 64.885 1 -1.3631592247271007 0.3899426766075083 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 127470 17006 VQSVPINNGPL True PC9_epitope_Rep1 1136.61897267404 1136.6178699358602 70.236 2 -1.36330249959198 0.3899426766075083 1.0 ['ENSG00000164142|ENST00000435205|FHIP1A'] 47287 9776 IYFGFIPEI True PC9_epitope_Rep1 1097.57973363101 1097.5786299358601 42.464 2 -1.3633072385291212 0.3899426766075083 1.0 ['nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1'] 122934 8412 VGVVMAHV True PC9_epitope_Rep1 810.4421946123799 810.44108993586 37.193 2 -1.3633316461586025 0.3899426766075083 1.0 ['ENST00000416904.4_1_12:53582085-53582160:+|nuORF'] 34999 25883 GRALWHLRLA True PC9_epitope_Rep1 1191.69889476059 1191.6972449037899 104.67 3 -1.363394636706027 0.3899426766075083 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 74907 6912 NLRSEPPK True NCI_RA007_Epitope_Rep2 939.5137793295099 939.51268993586 31.506 2 -1.3634682957583453 0.3899426766075083 1.0 ['ENSG00000198173|ENST00000358047|FAM47C'] 9335 3510 AVSVLGSGLGL True NCI_RA007_Epitope_Rep4 971.5651461960299 971.56404993586 19.48 2 -1.3634698158967038 0.3899426766075083 1.0 ['ENSG00000198816|ENST00000597229|ZNF358'] 65225 11353 LSEDADSPWLL True NCI_RA007_Epitope_Rep1 1244.59248314268 1244.5913899358602 48.133 2 -1.3634788944208605 0.3899426766075083 1.0 ['MAPK8IP2|p.N756Tfs*24|1|0.29|ENSG00000008735|chr22:50606954-50606954|A/-|frameshift_variant', 'nc|ENSG00000008735|Q13387-2|MAPK8IP2', 'ENSG00000008735|ENST00000329492|MAPK8IP2'] 128033 10157 VRRGRLTSTST True NCI_RA007_Epitope_Rep3 1232.69493157896 1232.69437496793 47.041 1 -1.3634834415178898 0.3899426766075083 1.0 ['ENSG00000166225|ENST00000549921|FRS2'] 117260 11323 TYYYLNQG True PC9_epitope_Rep3 1020.4552613938799 1020.45416993586 48.56 2 -1.363485552368486 0.3899426766075083 1.0 ['ENSG00000091536|ENST00000647165|MYO15A', 'ENST00000581866.1_1_17:73588547-73589005:+|nuORF', 'ENST00000584516.5_1_17:73587014-73591049:+|nuORF', 'ENSG00000266714|ENST00000645453|MYO15B'] 20931 6485 EQVMRIGLDLP True H1975_Epitope_Rep1 1269.6751076511698 1269.67400993586 30.006 2 -1.3635263340897597 0.3899426766075083 1.0 ['nc|ENSG00000005381|P05164-2|MPO', 'ENSG00000005381|ENST00000225275|MPO', 'nc|ENSG00000005381|P05164-3|MPO'] 65398 10510 LSERWDAY True H1975_Epitope_Rep1 1038.47705946762 1038.4759699358601 45.379 2 -1.3635356908667668 0.3899426766075083 1.0 ['ENSG00000010327|ENST00000321725|STAB1'] 41876 7903 IDVQLYILSF True H1975_Epitope_Rep1 1209.6645258841297 1209.6634299358602 35.35 2 -1.3635660164646894 0.3899426766075083 1.0 ['ENSG00000151876|ENST00000281623|FBXO4', 'nc|ENSG00000151876|Q9UKT5-2|FBXO4'] 111539 8308 TLLTLHFPRL True NCI_RA007_Epitope_Rep1 1209.7233781729299 1209.7217249037901 36.317 3 -1.3635768605528462 0.3899426766075083 1.0 ['ENSG00000175595|ENST00000311895|ERCC4'] 99311 14376 SLDLEKEIEF True PC9_epitope_Rep1 1221.6128842340897 1221.61123490379 60.121 3 -1.3636077351320581 0.3899426766075083 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 117156 5869 TYSRNERWEY True H1975_Epitope_Rep1 1402.62657723562 1402.62548993586 27.643 2 -1.3636152646674438 0.3899426766075083 1.0 ['ENSG00000086570|ENST00000261800|FAT2'] 121292 10294 VGHHASSI True PC9_epitope_Rep1 806.40350060454 806.40240993586 44.482 2 -1.3636629529707538 0.3899426766075083 1.0 ['ENSG00000108387|ENST00000672673|SEPTIN4', 'nc|ENSG00000108387|O43236-8|SEPTIN4'] 32533 8601 GGSGHHQHY True H1975_Epitope_Rep2 978.4056258628602 978.40452993586 38.038 2 -1.3636926326606589 0.3899739115866063 1.0 ['nc|ENSG00000064651|P55011-3|SLC12A2', 'ENSG00000064651|ENST00000262461|SLC12A2'] 115549 6651 TVHILETYEGW True PC9_epitope_Rep5 1346.6506667251401 1346.64901490379 30.555 3 -1.3637259612537473 0.3899885117993394 1.0 ['nc|ENSG00000150760|Q14185|DOCK1', 'ENSG00000150760|ENST00000623213|DOCK1'] 46204 16813 ITDLKKHP True PC9_epitope_Rep2 950.5549158654999 950.55380993586 69.92 2 -1.3637276646669532 0.3899885117993394 1.0 ['ENSG00000177483|ENST00000316997|RBM44'] 43204 18266 IGTVPPPAV True PC9_epitope_Rep2 849.4960040070499 849.49490993586 75.582 2 -1.363814130753656 0.39001507790249623 1.0 ['ENST00000452079.5_2_1:3659748-3662767:-|nuORF', 'ENST00000418088.5_2_1:3659748-3662908:-|nuORF'] 122493 10958 VGSRLDAL True PC9_epitope_Rep4 829.4657665079299 829.46521496793 49.92 1 -1.3638238669964973 0.39001507790249623 1.0 ['ENSG00000176155|ENST00000694881|CCDC57', 'nc|ENSG00000176155|Q2TAC2|CCDC57'] 55215 25022 LAPRAGVQCFK True PC9_epitope_Rep5 1188.6437479532399 1188.64210490379 101.4 3 -1.3638481055106002 0.39003434370026446 1.0 ['ENST00000610036.1_1_2:105953638-105953692:-|nuORF'] 45901 14906 ISRFIPPWL True PC9_epitope_Rep4 1127.64915060351 1127.6480499358602 65.277 2 -1.363909335017522 0.390065575339843 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2'] 12123 6708 DIHKACKSQT True NCI_RA007_Epitope_Rep4 1129.5549925184898 1129.55388993586 32.425 2 -1.3640311351275702 0.39007465543644715 1.0 ['ENSG00000185900|ENST00000331373|POMK'] 62233 24493 LLPYVLRIWLW True PC9_epitope_Rep2 1470.8751277870597 1470.87349490379 99.804 3 -1.3641018696995693 0.39007465543644715 1.0 ['ENST00000367742.7_1_1:171561357-171561441:+|nuORF'] 111949 8155 TLSCSSSQREC True PC9_epitope_Rep1 1199.4910719325899 1199.48941490379 36.198 3 -1.3642150583608161 0.39007465543644715 1.0 ['chr7:50504059-50513259|115|12.32|0.0|20.23|-|2|TE_info:L1PB1,L1PB1_dup5738,L1,LINE,donor,+,50513259,50517927|DDC,None|9'] 127639 7633 VRDTQAVRHYK True H1975_Epitope_Rep1 1371.7371307441101 1371.7360299358602 34.346 2 -1.3642178582233773 0.39007465543644715 1.0 ['ENSG00000101213|ENST00000542869|PTK6'] 33260 16029 GLALSSNK True NCI_RA007_Epitope_Rep2 788.4392174069201 788.4386649679301 67.067 1 -1.364228416638654 0.39007465543644715 1.0 ['nc|ENSG00000158055|Q8TE85-4|GRHL3', 'nc|ENSG00000158055|Q8TE85-3|GRHL3', 'chr1:24319941-24331426|424|14.04|0.52|4.74|+|ENST00000524724|GRHL3,GRHL3', 'ENSG00000158055|ENST00000361548|GRHL3', 'nc|ENSG00000158055|Q8TE85-2|GRHL3', 'nc|ENSG00000158055|Q8TE85|GRHL3'] 94306 15881 RWSYVRIYKFL True PC9_epitope_Rep1 1529.8507039443696 1529.8496099358601 65.895 2 -1.3642625932845147 0.39007465543644715 1.0 ['ATP8B3|p.C994Y|1|0.36|ENSG00000130270|chr19:1788985-1788985|C/T|missense_variant'] 101693 23080 SPGALLPRHR True PC9_epitope_Rep4 1102.63596015086 1102.63537496793 96.999 1 -1.364320694079785 0.39007465543644715 1.0 ['ENSG00000129910|ENST00000289746|CDH15'] 78762 15930 PEIFQFLQQ True PC9_epitope_Rep4 1148.5866099165999 1148.58550993586 69.201 2 -1.3643253790362813 0.39007465543644715 1.0 ['nc|ENSG00000173193|Q460N5-3|PARP14', 'nc|ENSG00000173193|Q460N5-1|PARP14', 'ENSG00000173193|ENST00000474629|PARP14', 'nc|ENSG00000173193|Q460N5-4|PARP14', 'PARP14|p.A1427Gfs*4|1|0.15|ENSG00000173193|chr3:122718430-122718440|GCAACTTTTCG/-|frameshift_variant'] 87853 13268 QVKYQDAPAA True PC9_epitope_Rep5 1089.5454733806098 1089.54436993586 56.046 2 -1.364342585326101 0.39007465543644715 1.0 ['KEAP1|p.N469Kfs*11|1|0.54|ENSG00000079999|chr19:10489772-10489773|-/T|frameshift_variant', 'KEAP1|p.R596Efs*2|1|0.17|ENSG00000079999|chr19:10486741-10486741|G/-|frameshift_variant', 'ENSG00000079999|ENST00000171111|KEAP1', 'KEAP1|p.C319Afs*9|1|0.35|ENSG00000079999|chr19:10491948-10491948|G/-|frameshift_variant'] 22847 14995 EVEGVGHWYQR True H1975_Epitope_Rep3 1358.6367479965 1358.63564993586 63.068 2 -1.3644043172779783 0.39007465543644715 1.0 ['ENSG00000198780|ENST00000687041|FAM169A'] 117698 15056 VALACFLHFG True PC9_epitope_Rep2 1076.54772231008 1076.5466299358602 63.171 2 -1.3644788411232698 0.39007465543644715 1.0 ['nc|ENSG00000079385|P13688-8|CEACAM1', 'nc|ENSG00000079385|P13688-10|CEACAM1', 'ENSG00000079385|ENST00000161559|CEACAM1', 'ENST00000485605.1_1_19:43015056-43023397:-|nuORF', 'nc|ENSG00000079385|P13688-11|CEACAM1', 'nc|ENSG00000079385|P13688-9|CEACAM1', 'nc|ENSG00000079385|P13688-6|CEACAM1', 'nc|ENSG00000079385|P13688-5|CEACAM1', 'ENST00000488639.6_1_19:43015548-43016560:-|nuORF', 'nc|ENSG00000079385|P13688-7|CEACAM1'] 41834 5619 IDSSTLAP True PC9_epitope_Rep1 802.4072485723 802.40614993586 26.439 2 -1.3644976094156434 0.39007465543644715 1.0 ['ENSG00000171940|ENST00000371471|ZNF217'] 56161 19658 LDNKNPKI True PC9_epitope_Rep1 940.5341804209199 940.53308993586 80.44 2 -1.3645060539420462 0.39007465543644715 1.0 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant'] 89555 7195 RERRREQLRQW True NCI_RA007_Epitope_Rep2 1611.8818379151896 1611.88018490379 32.608 3 -1.3645080189331773 0.39007465543644715 1.0 ['PPP1R12C|p.S550Pfs*14|1|0.13|ENSG00000125503|chr19:55094380-55094380|A/-|frameshift_variant', 'nc|ENSG00000125503|Q9BZL4-2|PPP1R12C', 'nc|ENSG00000125503|Q9BZL4-3|PPP1R12C', 'nc|ENSG00000125503|Q9BZL4-4|PPP1R12C', 'ENSG00000125503|ENST00000263433|PPP1R12C'] 69765 23608 LWMLLKLRQR True PC9_epitope_Rep2 1355.8223810215497 1355.82073490379 96.277 3 -1.3645362776547802 0.39007465543644715 1.0 ['ENST00000599519.1_1_19:7542090-7548186:-|nuORF', 'nc|ENSG00000104883|Q96HA9-2|PEX11G', 'ENSG00000104883|ENST00000221480|PEX11G'] 62889 21963 LMRTRRVCL True PC9_epitope_Rep2 1146.64778778786 1146.6466899358602 89.958 2 -1.3645364644183209 0.39007465543644715 1.0 ['ENST00000423462.6_1_10:16553279-16553402:+|nuORF'] 55841 13074 LDESEEREL True PC9_epitope_Rep1 1118.5091474415399 1118.50804993586 55.157 2 -1.364563798855588 0.39009391637255486 1.0 ['nc|ENSG00000204991|Q8WWL2-3|SPIRE2', 'nc|ENSG00000204991|Q8WWL2-2|SPIRE2', 'ENST00000569108.5_1_16:89916567-89936677:+|nuORF', 'ENSG00000204991|ENST00000378247|SPIRE2'] 14217 13954 DSVNKALYWVN True NCI_RA007_Epitope_Rep1 1307.65100107831 1307.64990993586 58.301 2 -1.364600174363956 0.3900965461136301 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000032840'] 93781 17636 RTTKRLSV True NCI_RA007_Epitope_Rep5 959.5876129761099 959.58650993586 74.62 2 -1.3646158168708489 0.3900965461136301 1.0 ['ENSG00000163632|ENST00000295896|C3orf49'] 55882 13843 LDFYQHDK True H1975_Epitope_Rep1 1064.49270953176 1064.4916099358602 58.393 2 -1.3646451677191678 0.39010384265684067 1.0 ['ENSG00000101216|ENST00000370077|GMEB2'] 122643 12791 VGTNRALL True PC9_epitope_Rep3 842.4974009893799 842.49630993586 54.221 2 -1.3647311103231468 0.39011113902546984 1.0 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 72973 3500 NCPSFALH True PC9_epitope_Rep6 887.3959726959499 887.39486993586 19.668 2 -1.36483581718117 0.3901423615264984 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 11366 18949 DFFLKHPDK True PC9_epitope_Rep3 1145.5869442697697 1145.58529490379 78.112 3 -1.3649004543580379 0.39014965725975287 1.0 ['nc|ENSG00000083642|Q9NTI5-2|PDS5B', 'PDS5B|p.K1318Nfs*76|1|0.74|ENSG00000083642|chr13:32770442-32770442|A/-|frameshift_variant', 'ENSG00000083642|ENST00000315596|PDS5B', 'nc|ENSG00000083642|Q9NTI5-3|PDS5B', 'ENST00000498550.5_1_13:33222909-33262824:+|nuORF', 'PDS5B|p.P1091Gfs*11|1|0.17|ENSG00000083642|chr13:32758614-32758615|CC/-|frameshift_variant', 'nc|ENSG00000083642|Q9NTI5-4|PDS5B', 'ENST00000493653.1_1_13:33222909-33226198:+|nuORF'] 135955 5134 YFAFLFLFTYV True NCI_RA007_Epitope_Rep4 1429.7322115211298 1429.73056490379 26.266 3 -1.3649691957313266 0.39015228547844916 1.0 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5', 'nc|ENSG00000070985|Q9NZQ8-3|TRPM5'] 35083 24709 GRKKHLPARL True PC9_epitope_Rep4 1174.74109392574 1174.7399899358602 103.54 2 -1.3650124475088679 0.39015228547844916 1.0 ['ENST00000477661.1_1_10:5005492-5009304:+|nuORF'] 137692 23947 YMISTSET True H1975_Epitope_Rep1 930.4004489397 930.39934993586 99.395 2 -1.3650438541999403 0.39015287447068114 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5'] 5428 6133 ALWEYEVY True PC9_epitope_Rep4 1071.49131254943 1071.49020993586 30.606 2 -1.3650850683584457 0.39015287447068114 1.0 ['nc|ENSG00000006715|P49754-2|VPS41', 'nc|ENSG00000006715|P49754-3|VPS41', 'ENSG00000006715|ENST00000310301|VPS41'] 52588 18470 KPYMRKFK True NCI_RA007_Epitope_Rep5 1096.6215559566797 1096.62097496793 77.872 1 -1.365102598830903 0.39015287447068114 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 32564 24110 GGWAGGNA True H1975_Epitope_Rep1 688.2928875263999 688.2923349679301 100.02 1 -1.3651767809246853 0.39015287447068114 1.0 ['nc|ENSG00000151552|P09417-2|QDPR', 'ENSG00000151552|ENST00000281243|QDPR'] 107521 6079 TAASIPDYRG True NCI_RA007_Epitope_Rep3 1049.51417325233 1049.5130699358601 30.895 2 -1.3651947078897277 0.39015287447068114 1.0 ['ENSG00000187531|ENST00000328666|SIRT7', 'nc|ENSG00000187531|Q9NRC8-3|SIRT7', 'nc|ENSG00000187531|Q9NRC8-2|SIRT7', 'ENST00000571832.5_1_17:79873246-79876007:-|nuORF'] 39595 7893 HPLEQILSV True H1975_Epitope_Rep3 1034.5760452328998 1034.57494993586 35.336 2 -1.365335059741513 0.3902199787078793 1.0 ['ENST00000215912.9_3_22:31678754-31679060:-|nuORF'] 24093 7727 EYRLPLFFDP True H1975_Epitope_Rep1 1295.6550238295897 1295.65392993586 34.683 2 -1.3653550123669678 0.3902272727272727 1.0 ['ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 83585 4721 QDSYGTRL True PC9_epitope_Rep1 938.4457593393399 938.44466993586 23.029 2 -1.3654017096649262 0.39022989880624864 1.0 ['ENST00000242108.8_1_7:36320796-36324343:+|nuORF'] 62198 14306 LLPPIHTY True H1975_Epitope_Rep1 952.5382031721999 952.53710993586 60.215 2 -1.365403943290778 0.39022989880624864 1.0 ['ENST00000478553.1_1_20:4763250-4763406:-|nuORF'] 118562 20477 VDYNPRDNQLY True PC9_epitope_Rep1 1395.64189294659 1395.64078993586 83.577 2 -1.3655281941129893 0.3902371924452472 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'ADGRL2|p.A1202Rfs*21|1|0.14|ENSG00000117114|chr1:81987006-81987025|CAGCTCCTGTATTTAACTCA/-|frameshift_variant', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2', 'nc|ENSG00000072071|O94910|ADGRL1', 'ENSG00000072071|ENST00000361434|ADGRL1'] 118221 4183 VAYHGHGVSA True PC9_epitope_Rep1 996.4777281739598 996.47662993586 20.985 2 -1.365542424499892 0.39024448590976507 1.0 ['ENST00000550146.5_1_12:48357374-48358078:+|nuORF', 'ENST00000429772.6_1_12:48357436-48358078:+|nuORF'] 39598 11707 HPLLDPAVP True PC9_epitope_Rep5 957.52836676449 957.52726993586 50.029 2 -1.365657831664606 0.39025907231538404 1.0 ['nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C'] 32560 10963 GGVHLTTT True NCI_RA007_Epitope_Rep5 784.4079172786401 784.40682993586 48.806 2 -1.3656881048674143 0.39025907231538404 1.0 ['ENSG00000169116|ENST00000307428|PARM1'] 91395 18285 RNDGDPQAL True PC9_epitope_Rep4 984.46247203264 984.46136993586 78.404 2 -1.365748008745584 0.39026490462237634 1.0 ['ENSG00000128965|ENST00000617768|CHAC1', 'nc|ENSG00000128965|Q9BUX1-2|CHAC1'] 78982 24820 PFKRYVKK True H1975_Epitope_Rep1 1064.64948495668 1064.6483899358602 102.79 2 -1.3657530574446037 0.39026490462237634 1.0 ['nc|ENSG00000198732|Q9H4F8|SMOC1', 'ENSG00000198732|ENST00000361956|SMOC1'] 131640 23651 VWELLMLL True PC9_epitope_Rep4 1015.5776254560299 1015.57652993586 99.317 2 -1.365767673158622 0.39026490462237634 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 112227 16122 TLWRRNAE True PC9_epitope_Rep4 1044.5464764401197 1044.5453699358602 69.953 2 -1.3658586461838365 0.39026490462237634 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 111812 5872 TLRFRGAL True PC9_epitope_Rep2 932.5555845718399 932.55448993586 27.982 2 -1.3658929115858958 0.39026490462237634 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 110098 21635 TIAMFQLAV True PC9_epitope_Rep1 992.5364889200398 992.5353899358599 88.045 2 -1.3659060848716529 0.39026490462237634 1.0 ['AJAP1|p.L28_I29insKWT|1|0.14|ENSG00000196581|chr1:4711954-4711955|-/AAATGGACT|inframe_insertion'] 115881 14813 TVPCCFGY True PC9_epitope_Rep6 888.3509966494798 888.34988993586 68.951 2 -1.365920760907686 0.39026490462237634 1.0 ['chr2:222572022-222586338|111|10.41|0.25|5.35|-|0|TE_info:L1PA5,L1PA5_dup1583,L1,LINE,donor,+,222586338,222590526|FARSB,None|20'] 20399 19712 EPLRPFLAP True PC9_epitope_Rep5 1038.58621599378 1038.5851099358601 80.867 2 -1.365922414182142 0.39026490462237634 1.0 ['nc|ENSG00000128276|O75679-2|RFPL3', 'ENSG00000128276|ENST00000249007|RFPL3', 'RFPL2|p.S347T|1|0.38|ENSG00000128253|chr22:32190870-32190870|A/T|missense_variant', 'nc|ENSG00000128253|O75678-3|RFPL2', 'ENSG00000128253|ENST00000652607|RFPL2'] 80995 15976 PNNLCHSG True NCI_RA007_Epitope_Rep5 840.3548361599601 840.35372993586 68.177 2 -1.3659749194244946 0.39026490462237634 1.0 ['nc|ENSG00000103342|P15170-2|GSPT1', 'ENSG00000103342|ENST00000434724|GSPT1', 'nc|ENSG00000103342|P15170|GSPT1'] 68950 4813 LVFSATPEK True H1975_Epitope_Rep3 990.5385970950199 990.53750993586 23.639 2 -1.3660527057872085 0.3902675293301601 1.0 ['ENSG00000136205|ENST00000311160|TNS3', 'nc|ENSG00000136205|Q68CZ2-3|TNS3'] 117862 18355 VAPGTAPLPRL True PC9_epitope_Rep5 1090.6498788795 1090.6487899358601 75.619 2 -1.3660781683632104 0.3902675293301601 1.0 ['ENSG00000163482|ENST00000295709|STK36', 'STK36|p.E1226Pfs*43|1|0.22|ENSG00000163482|chr2:218699219-218699244|AGAGGAGCTGTTACAGTGCGAAGTAC/-|frameshift_variant', 'nc|ENSG00000163482|Q9NRP7-2|STK36'] 36952 23757 GVRGMCFL True H1975_Epitope_Rep1 881.42516464925 881.4246149679301 98.623 1 -1.3660883387483997 0.39027277836907 1.0 ['GCN1|p.G2533C|1|0.42|ENSG00000089154|chr12:120130720-120130720|C/A|missense_variant'] 83595 5988 QDTQSRPWAP True NCI_RA007_Epitope_Rep1 1184.5574350466397 1184.55632993586 27.336 2 -1.3661338685567161 0.39027277836907 1.0 ['ENST00000219837.11_2_16:19726253-19729517:-|nuORF'] 90050 15350 RGGQGHGE True PC9_epitope_Rep3 796.3576130412799 796.35650993586 64.199 2 -1.3661356302245986 0.39027277836907 1.0 ['ENSG00000115297|ENST00000233638|TLX2'] 55811 9259 LDELSLFGP True H1975_Epitope_Rep3 989.5069626135698 989.50586993586 40.606 2 -1.3661568684758925 0.39027277836907 1.0 ['ENSG00000115165|ENST00000264192|CYTIP', 'nc|ENSG00000115165|O60759-2|CYTIP'] 62395 23593 LLRRRLRQWRW True NCI_RA007_Epitope_Rep5 1637.9855151380898 1637.98387490379 98.067 3 -1.3662442553108411 0.3902800698380809 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 74955 9186 NLVAKMKK True H1975_Epitope_Rep1 930.5684577546599 930.5679049679301 40.241 1 -1.3662974170959208 0.390306610542428 1.0 ['nc|ENSG00000146833|Q9C037-3|TRIM4', 'ENSG00000146833|ENST00000349062|TRIM4', 'nc|ENSG00000146833|Q9C037|TRIM4'] 119968 10941 VEYRPLTL True NCI_RA007_Epitope_Rep2 989.5545815123298 989.55348993586 47.166 2 -1.3663045669440916 0.390306610542428 1.0 ['nc|ENSG00000164050|O43157-2|PLXNB1', 'ENSG00000164050|ENST00000296440|PLXNB1', 'ENST00000485535.5_1_3:48445895-48454598:-|nuORF', 'ENST00000470525.1_1_3:48452064-48453367:-|nuORF'] 120179 9636 VFLGVDTG True PC9_epitope_Rep1 806.41741933318 806.41632993586 41.921 2 -1.366553370764738 0.3903617339312407 1.0 ['ENST00000492733.1_1_10:99215760-99215802:+|nuORF', 'ENST00000487315.1_1_10:99213348-99216645:+|nuORF', 'ENST00000495735.5_1_10:99212613-99216645:+|nuORF', 'ENST00000459777.5_1_10:99206080-99216645:+|nuORF', 'ENST00000466895.5_1_10:99206080-99216645:+|nuORF', 'nc|ENSG00000171307|Q969W1-4|ZDHHC16', 'nc|ENSG00000171307|Q969W1-3|ZDHHC16', 'nc|ENSG00000171307|Q969W1-2|ZDHHC16', 'ENSG00000171307|ENST00000393760|ZDHHC16'] 11415 12216 DFLWQVSTI True PC9_epitope_Rep2 1107.56006081559 1107.5589699358602 52.302 2 -1.3666347705928945 0.3903716458602382 1.0 ['SLIT2|p.N183Tfs*60|1|0.21|ENSG00000145147|chr4:20486207-20486207|A/-|frameshift_variant'] 66773 12482 LSVALACAHGH True PC9_epitope_Rep4 1077.53894853153 1077.53784993586 55.818 2 -1.366649626048419 0.3903716458602382 1.0 ['ENST00000482108.1_2_7:94297339-94297486:+|nuORF'] 81758 15647 PSDNPHVL True PC9_epitope_Rep2 877.42938099921 877.42828993586 65.461 2 -1.3666589471804156 0.3903716458602382 1.0 ['ENSG00000145623|ENST00000274276|OSMR'] 63882 15161 LPVIRAFDHQ True PC9_epitope_Rep5 1194.65094150866 1194.6493049037902 63.323 3 -1.366776815146067 0.3903789355367157 1.0 ['ABCC2|p.E1177D|1|0.8|ENSG00000023839|chr10:99836207-99836207|G/T|missense_variant'] 29684 13284 FVNLKTVL True NCI_RA007_Epitope_Rep4 932.5695033004799 932.56840993586 58.233 2 -1.3670300444946037 0.39041013990194906 1.0 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B'] 10410 11060 CLKRQGGG True NCI_RA007_Epitope_Rep4 817.4228561501297 817.42174993586 49.411 2 -1.3671585178834276 0.3904413435209432 1.0 ['nc|ENSG00000288591|Q9Y2I9-3|TBC1D30', 'ENSG00000111490|ENST00000539867|TBC1D30'] 123679 15086 VINVESLVR True PC9_epitope_Rep2 1027.6025943339098 1027.6014899358602 63.285 2 -1.3672195592132872 0.3904486321025445 1.0 ['ENST00000467042.1_1_2:99182504-99185377:+|nuORF', 'nc|ENSG00000040933|Q96PE3-2|INPP4A', 'nc|ENSG00000040933|Q96PE3-4|INPP4A', 'ENSG00000040933|ENST00000409851|INPP4A', 'nc|ENSG00000040933|Q96PE3|INPP4A'] 96475 8294 SEKDRSLERER True H1975_Epitope_Rep1 1403.7117038419099 1403.71060993586 36.835 2 -1.3672845351818832 0.3904678775124652 1.0 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 29930 25881 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 107.1 3 -1.3672937310138598 0.39047516560250617 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 121618 19154 VGLEKPSLEP True H1975_Epitope_Rep1 1067.58627556343 1067.5851699358602 79.822 2 -1.3673382174377808 0.39049441023494946 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 10791 14467 DACLVPNTP True PC9_epitope_Rep5 928.43241777432 928.4318649679301 60.648 1 -1.367434375153678 0.3905136544071931 1.0 ['ENSG00000172689|ENST00000308287|MS4A10'] 12492 8791 DKYRDQYNWFF True NCI_RA007_Epitope_Rep3 1580.7048275563195 1580.70372993586 41.668 2 -1.3674790741281275 0.39052822879552357 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 24513 22767 FAIYLITM True PC9_epitope_Rep2 970.51977622674 970.51866993586 93.067 2 -1.367488839004505 0.39052822879552357 1.0 ['ENSG00000206536|ENST00000383695|OR5K3'] 111725 15146 TLPYFHSFLYM True H1975_Epitope_Rep1 1417.6740450220102 1417.67294993586 63.517 2 -1.3675144088931184 0.3905355157283086 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant', 'nc|ENSG00000145555|Q9HD67-3|MYO10'] 20248 5442 ENWYKKYQKP True PC9_epitope_Rep4 1382.6982856238997 1382.69665490379 27.669 3 -1.3675949526983893 0.39053608148821195 1.0 ['ENST00000461622.1_1_7:65429142-65432870:-|nuORF', 'nc|ENSG00000169919|P08236-3|GUSB', 'nc|ENSG00000169919|P08236-2|GUSB', 'ENSG00000169919|ENST00000304895|GUSB'] 59334 19323 LGIVMARAI True PC9_epitope_Rep2 942.5684577546599 942.56736993586 79.7 2 -1.3676162884441612 0.39053608148821195 1.0 ['nc|ENSG00000169507|Q08AI6-2|SLC38A11', 'chr2:164939556-164945593|106|14.66|0.68|4.43|-|ENST00000303735|SLC38A11,SLC38A11', 'nc|ENSG00000169507|Q08AI6|SLC38A11', 'ENSG00000169507|ENST00000685975|SLC38A11'] 137398 23208 YLLLGAIH True H1975_Epitope_Rep3 898.5276384885001 898.52654993586 96.906 2 -1.3676272022931142 0.39053608148821195 1.0 ['nc|ENSG00000168234|Q8N584-2|TTC39C', 'ENSG00000168234|ENST00000317571|TTC39C'] 80599 11696 PLPEAALQ True NCI_RA007_Epitope_Rep3 837.45961849833 837.4590749679301 53.122 1 -1.3676837244974527 0.39053608148821195 1.0 ['ENSG00000268350|ENST00000622447|FAM156A', 'ENSG00000179304|ENST00000416841|FAM156B'] 75617 12738 NQSDQLPGWSP True H1975_Epitope_Rep2 1227.5520153130299 1227.5514749679298 54.099 1 -1.3677069859413513 0.39053608148821195 1.0 ['ENST00000448516.6_1_16:31142309-31142426:+|nuORF'] 78843 9701 PERGEFLAP True NCI_RA007_Epitope_Rep2 1014.5134449763398 1014.51234993586 42.354 2 -1.3677561799249665 0.39055065394639316 1.0 ['nc|ENSG00000136153|Q8WWI1-3|LMO7', 'nc|ENSG00000136153|Q8WWI1-4|LMO7', 'nc|ENSG00000136153|Q8WWI1-2|LMO7', 'nc|ENSG00000136153|Q8WWI1|LMO7', 'ENST00000563635.5_1_13:76195947-76378681:+|nuORF', 'LMO7|p.E1615Vfs*12|1|0.26|ENSG00000136153|chr13:75855330-75855331|GA/-|frameshift_variant', 'ENSG00000136153|ENST00000377534|LMO7'] 65147 12386 LSDSAGIGFRH True NCI_RA007_Epitope_Rep1 1158.57817049122 1158.5770699358602 52.154 2 -1.3678127627591619 0.39055065394639316 1.0 ['nc|ENSG00000163701|Q8NFR9-3|IL17RE', 'ENSG00000163701|ENST00000383814|IL17RE', 'nc|ENSG00000163701|Q8NFR9-5|IL17RE', 'ENST00000489181.5_1_3:9944520-9950978:+|nuORF'] 33599 7759 GLLHEVVSL True PC9_epitope_Rep3 965.55458151233 965.55348993586 34.837 2 -1.3678504164053003 0.39055327084927316 1.0 ['ENSG00000213047|ENST00000620048|DENND1B'] 68925 8301 LVFNKVNI True NCI_RA007_Epitope_Rep4 945.5647522732099 945.56364993586 38.739 2 -1.3678572262437183 0.39055327084927316 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant'] 18441 4743 EKHFQREEQER True H1975_Epitope_Rep3 1514.7226028787798 1514.72150993586 23.37 2 -1.3679502711498057 0.390572511327093 1.0 ['nc|ENSG00000135525|Q14244-2|MAP7', 'nc|ENSG00000135525|Q14244-6|MAP7', 'nc|ENSG00000135525|Q14244-4|MAP7', 'ENSG00000135525|ENST00000354570|MAP7', 'nc|ENSG00000135525|Q14244-7|MAP7', 'nc|ENSG00000135525|Q14244-5|MAP7', 'nc|ENSG00000135525|Q14244-3|MAP7'] 54963 20323 LAHTRYTF True PC9_epitope_Rep4 1007.5188647099501 1007.51776993586 86.315 2 -1.368068524503456 0.3906276150627615 1.0 ['EPHB3|p.A550Pfs*56|1|0.48|ENSG00000182580|chr3:184577903-184577903|G/-|frameshift_variant', 'ENSG00000182580|ENST00000330394|EPHB3'] 7227 6639 AREERRWCWIW True H1975_Epitope_Rep1 1589.7673853265699 1589.7657449037902 30.59 3 -1.3681650213399483 0.39065413857409265 1.0 ['ENST00000482384.1_1_1:109756594-109756711:+|nuORF'] 114687 10786 TSSGYQPRP True PC9_epitope_Rep4 991.4723084403499 991.47120993586 49.247 2 -1.3682015366868099 0.39065413857409265 1.0 ['ENST00000553837.5_1_12:57625333-57628141:+|nuORF', 'ENST00000555774.5_1_12:57624752-57628141:+|nuORF'] 139046 11206 YSKIDHIL True PC9_epitope_Rep4 987.5389314481899 987.53782993586 50.88 2 -1.3682556644840649 0.3906733769261114 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|22|1|sense', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|9|1|sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|179|3|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|152|3|sense', 'L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|10|1|sense', 'L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|86|2|sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|13|1|sense'] 39016 7126 HKGTEKNPEI True NCI_RA007_Epitope_Rep4 1151.59348620219 1151.5923899358602 34.029 2 -1.3682779884445313 0.3906759906759907 1.0 ['SETD2|p.E2423Kfs*27|1|0.26|ENSG00000181555|chr3:47037749-47037749|C/-|frameshift_variant', 'ENSG00000181555|ENST00000409792|SETD2', 'nc|ENSG00000181555|Q9BYW2-3|SETD2', 'nc|ENSG00000181555|Q9BYW2-2|SETD2'] 35082 23664 GRKGPVGG True NCI_RA007_Epitope_Rep3 726.4136713654199 726.41312496793 102.61 1 -1.3682990292121786 0.3906759906759907 1.0 ['ENST00000372663.8_1_9:131483181-131483412:-|nuORF'] 1608 9790 AEFRHLERLQQ True H1975_Epitope_Rep3 1425.7476954278097 1425.7465899358601 42.681 2 -1.3683314659623909 0.39067860430089535 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614', 'nc|ENSG00000135835|Q5VZ46-2|KIAA1614'] 56307 9504 LDQWMFGKV True PC9_epitope_Rep2 1122.55320161334 1122.5515649037902 41.901 3 -1.3683378947339695 0.39067860430089535 1.0 ['NPY5R|p.N247Tfs*8|1|0.35|ENSG00000164129|chr4:163351010-163351010|A/-|frameshift_variant', 'ENSG00000164129|ENST00000338566|NPY5R'] 16284 5513 EEIKTHLPP True PC9_epitope_Rep3 1062.57095985246 1062.5698699358602 26.284 2 -1.3684505804190221 0.3907030671033444 1.0 ['nc|ENSG00000164808|Q14159-2|SPIDR', 'ENSG00000164808|ENST00000297423|SPIDR', 'ENST00000524141.5_1_8:48173550-48625457:+|nuORF', 'nc|ENSG00000164808|Q14159-3|SPIDR'] 119170 2621 VEKFDLVP True NCI_RA007_Epitope_Rep3 945.5171333744498 945.51602993586 14.771 2 -1.3685527276384786 0.3907030671033444 1.0 ['ENSG00000148180|ENST00000432226|GSN', 'nc|ENSG00000148180|P06396-4|GSN', 'nc|ENSG00000148180|P06396-3|GSN', 'nc|ENSG00000148180|P06396|GSN', 'CON__Q3SX14'] 57334 6492 LEGSKWRA True H1975_Epitope_Rep3 945.5032146458099 945.50210993586 29.941 2 -1.368555831106706 0.3907030671033444 1.0 ['ENST00000557743.2_1_14:89756667-89757087:-|nuORF'] 90403 25308 RILTTRIHELK True PC9_epitope_Rep2 1378.8408675366597 1378.8397699358602 103.02 2 -1.3685733938715157 0.3907030671033444 1.0 ['ENST00000511325.1_1_3:128623240-128628375:+|nuORF', 'ENSG00000177646|ENST00000308982|ACAD9'] 74376 25379 NISVPGLQ True PC9_epitope_Rep2 826.45486747106 826.45376993586 103.3 2 -1.3685907271764155 0.3907030671033444 1.0 ['ENST00000441107.5_1_6:149982867-150018260:-|nuORF', 'ENSG00000131023|ENST00000543571|LATS1', 'LATS1|p.G535Efs*6|1|0.37|ENSG00000131023|chr6:149683485-149683485|C/-|frameshift_variant', 'nc|ENSG00000131023|O95835-2|LATS1', 'LATS1|p.D881Gfs*40|1|0.26|ENSG00000131023|chr6:149676689-149676690|-/C|frameshift_variant', 'ENST00000542747.5_1_6:149997344-150023094:-|nuORF'] 126303 14544 VPILEDTLM True PC9_epitope_Rep5 1029.54163387013 1029.5405299358601 60.943 2 -1.3686494378843816 0.39070623528427495 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 5464 17934 ALYNSKQL True PC9_epitope_Rep2 935.5076313199099 935.50652993586 74.289 2 -1.368663235805364 0.39070623528427495 1.0 ['RPS6KC1|p.K880Ffs*6|1|0.26|ENSG00000136643|chr1:213242113-213242120|CAAGGAAA/TTT|frameshift_variant', 'nc|ENSG00000136643|Q96S38-2|RPS6KC1', 'ENSG00000136643|ENST00000366960|RPS6KC1', 'ENST00000490299.5_1_1:213246316-213302929:+|nuORF'] 11573 12876 DGTFSAFP True PC9_epitope_Rep1 840.3653837603199 840.36428993586 54.401 2 -1.3686803620925052 0.39070623528427495 1.0 ['ENST00000378952.7_1_10:12222436-12228317:-|nuORF'] 114795 13751 TTCTKHPH True H1975_Epitope_Rep1 923.42833545339 923.42778496793 58.034 1 -1.3687046993098706 0.39070623528427495 1.0 ['nc|ENSG00000198682|O95340|PAPSS2', 'ENSG00000198682|ENST00000456849|PAPSS2'] 102105 10201 SPQEVLSPA True PC9_epitope_Rep3 926.4709114580198 926.46980993586 44.189 2 -1.3687051924259195 0.39070623528427495 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 20091 5412 ENIAREVEGK True H1975_Epitope_Rep2 1143.58840082175 1143.58730993586 25.845 2 -1.3687099661744897 0.39070623528427495 1.0 ['ENSG00000153147|ENST00000283131|SMARCA5'] 96422 12547 SEIEILAVDLP True NCI_RA007_Epitope_Rep2 1197.6492697428098 1197.64816993586 53.419 2 -1.3687197358935892 0.39070623528427495 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 100321 18702 SLMGVQMPN True PC9_epitope_Rep1 975.4517733199101 975.45066993586 76.727 2 -1.3687472891000378 0.39072546910481654 1.0 ['ENSG00000073614|ENST00000399788|KDM5A', 'nc|ENSG00000073614|P29375-2|KDM5A'] 5613 7207 APAAQLARAL True NCI_RA007_Epitope_Rep4 980.5767139392399 980.57560993586 34.354 2 -1.368916306469267 0.3907665463584865 1.0 ['ENSG00000102109|ENST00000218230|PCSK1N'] 122031 20474 VGQNRQRVKRV True NCI_RA007_Epitope_Rep1 1338.79564867974 1338.79454993586 83.856 2 -1.3689705141421837 0.3907665463584865 1.0 ['ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A', 'ENST00000572638.1_1_17:44625595-44632942:+|nuORF'] 135299 16720 YCGSSEED True PC9_epitope_Rep3 888.2807277298399 888.27962993586 69.452 2 -1.3689997992635319 0.3907665463584865 1.0 ['ENSG00000173258|ENST00000309235|ZNF483'] 68961 20965 LVGEVDILDR True H1975_Epitope_Rep3 1127.6186383208699 1127.61754993586 87.566 2 -1.369098408960447 0.3907665463584865 1.0 ['nc|ENSG00000050438|Q2Y0W8-4|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-5|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-3|SLC4A8', 'ENST00000319957.10_1_12:51818771-51890959:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-2|SLC4A8', 'ENSG00000050438|ENST00000453097|SLC4A8', 'ENST00000547697.6_1_12:51844670-51855120:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-8|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-6|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-7|SLC4A8'] 88469 7407 QYWNQKLIRSE True NCI_RA007_Epitope_Rep3 1463.7521121019097 1463.75047490379 36.261 3 -1.3691796442757276 0.39077382730803706 1.0 ['ENST00000506400.1_1_5:64906824-64920129:-|nuORF'] 55359 16199 LASLLDIL True PC9_epitope_Rep4 856.52696978216 856.52586993586 70.253 2 -1.3692651970841108 0.3908076196849829 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 4515 20132 AKPGGFGMG True NCI_RA007_Epitope_Rep5 820.3901590395199 820.38906993586 84.386 2 -1.3692926920803177 0.3908076196849829 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 55252 9435 LAQKAEEKENH True NCI_RA007_Epitope_Rep2 1295.64697832703 1295.6458899358602 41.311 2 -1.3693528760127303 0.3908076196849829 1.0 ['nc|ENSG00000079616|Q14807-2|KIF22', 'ENSG00000079616|ENST00000160827|KIF22', 'ENST00000565736.1_1_16:29814793-29815446:+|nuORF'] 19460 17689 ELQALRNDL True PC9_epitope_Rep3 1070.57202248162 1070.57092993586 73.237 2 -1.369415542413342 0.3908388006548835 1.0 ['ENSG00000203952|ENST00000695460|CCDC160'] 99159 12622 SLAQHQRSH True PC9_epitope_Rep2 1062.53188900514 1062.5307899358602 53.86 2 -1.3694984403454098 0.3908606390860639 1.0 ['ENSG00000198440|ENST00000333201|ZNF583', 'ZNF583|p.S448C|1|0.24|ENSG00000198440|chr19:56424000-56424000|A/T|missense_variant'] 90477 5847 RIWWNWLCLSW True NCI_RA007_Epitope_Rep1 1561.76526006825 1561.76362490379 26.795 3 -1.3695384297133062 0.3908606390860639 1.0 ['ENST00000558850.5_1_14:102798088-102800954:+|nuORF'] 41750 5787 IDPGSTER True NCI_RA007_Epitope_Rep5 873.41921023833 873.41866496793 28.946 1 -1.3695810056459905 0.3908606390860639 1.0 ['nc|ENSG00000196557|O95180-2|CACNA1H', 'ENSG00000196557|ENST00000348261|CACNA1H'] 111173 6176 TLFAGDSR True NCI_RA007_Epitope_Rep3 865.42938099921 865.42828993586 31.299 2 -1.3696985581558607 0.39087052637868197 1.0 ['ENST00000328554.8_1_22:19839984-19842309:-|nuORF', 'ENST00000329517.10_1_22:19808897-19842427:-|nuORF', 'ENST00000416337.1_3_22:19839984-19842274:-|nuORF', 'ENST00000407472.5_1_22:19839984-19842415:-|nuORF', 'ENST00000460402.5_1_22:19776234-19842274:-|nuORF', 'ENST00000403325.5_1_22:19808897-19842309:-|nuORF', 'ENST00000405640.1_1_22:19839984-19842309:-|nuORF'] 112738 25264 TPKGVKLNKNV True PC9_epitope_Rep2 1196.7241064489199 1196.72300993586 102.85 2 -1.3697071025053087 0.39087052637868197 1.0 ['ENSG00000254656|ENST00000649591|RTL1'] 46078 5044 ISYLMIALTV True PC9_epitope_Rep3 1122.63586860814 1122.63421490379 24.489 3 -1.3697160239663717 0.39087052637868197 1.0 ['ENSG00000114023|ENST00000477892|FAM162A'] 137947 12423 YPTHPLHGVH True PC9_epitope_Rep2 1156.5777765684 1156.57666993586 53.093 2 -1.3697812500132576 0.390873134417532 1.0 ['nc|ENSG00000165655|Q96F45-2|ZNF503', 'ENSG00000165655|ENST00000372524|ZNF503'] 63725 14861 LPQTPASVP True PC9_epitope_Rep3 908.4967322830399 908.49618496793 62.299 1 -1.369827999513234 0.390873134417532 1.0 ['nc|ENSG00000187144|Q7Z572-2|SPATA21', 'ENSG00000187144|ENST00000335496|SPATA21'] 54786 6187 LAEVLPQEIKQ True NCI_RA007_Epitope_Rep1 1266.7183523621397 1266.71671490379 28.101 3 -1.3698771073485667 0.39088041296243187 1.0 ['nc|ENSG00000216671|P0C7X3|CCNYL3'] 16962 4980 EGGPLEGAAW True PC9_epitope_Rep6 985.4505103666099 985.44940993586 26.745 2 -1.3699436348928011 0.39089964033505 1.0 ['ENSG00000066735|ENST00000423312|KIF26A'] 19492 20047 ELQGQPWPRP True H1975_Epitope_Rep3 1206.6145559999397 1206.6134499358602 83.902 2 -1.369971439340161 0.3909048546473421 1.0 ['ENST00000325844.8_1_15:89021271-89021544:+|nuORF'] 110950 5549 TLCHSKEGI True PC9_epitope_Rep1 986.4855159763399 986.48440993586 26.174 2 -1.3700260275292138 0.3909048546473421 1.0 ['ENSG00000152527|ENST00000282406|PLEKHH2', 'nc|ENSG00000152527|Q8IVE3-2|PLEKHH2', 'ENST00000405223.6_1_2:43871812-43968195:+|nuORF'] 34076 15479 GNTLTSLK True NCI_RA007_Epitope_Rep3 832.46543215476 832.46432993586 68.446 2 -1.3700280221205892 0.3909048546473421 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 76769 18541 NVAAGYLYGFV True NCI_RA007_Epitope_Rep4 1172.5866099166 1172.58550993586 80.229 2 -1.3700474432483523 0.3909048546473421 1.0 ['nc|ENSG00000180694|Q6YI46-4|TMEM64', 'ENSG00000180694|ENST00000458549|TMEM64'] 13917 5805 DREQERRRWQQ True NCI_RA007_Epitope_Rep2 1585.78218344357 1585.78054490379 27.198 3 -1.3702529141176174 0.390907461616584 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 130497 13400 VTVSLPLR True PC9_epitope_Rep2 883.54910220907 883.54800993586 56.824 2 -1.3702546924724854 0.390907461616584 1.0 ['LYPD3|p.V190L|1|0.28|ENSG00000124466|chr19:43461824-43461824|C/G|missense_variant'] 63867 10076 LPVDGRPLP True NCI_RA007_Epitope_Rep3 962.5549158654999 962.55380993586 46.727 2 -1.370338273162976 0.39091006846123516 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 44757 14146 IPSFLTKEVFI True H1975_Epitope_Rep1 1292.7380251775598 1292.7369299358602 59.585 2 -1.370340533014362 0.39091006846123516 1.0 ['ENST00000531387.5_1_11:3022346-3069017:-|nuORF', 'ENST00000526890.5_1_11:3050224-3063461:-|nuORF', 'ENST00000439280.6_1_11:3050478-3078655:-|nuORF'] 10898 4993 DARWNQHY True H1975_Epitope_Rep2 1088.47879080312 1088.47768993586 24.291 2 -1.370603000626912 0.39091528177680074 1.0 ['SLC5A8|p.V190Afs*31|1|0.33|ENSG00000256870|chr12:101193748-101193749|-/G|frameshift_variant'] 68481 22654 LTVFWMDFV True PC9_epitope_Rep2 1156.56270366788 1156.5616099358601 92.635 2 -1.3706519838137048 0.39091528177680074 1.0 ['ENST00000330374.6_1_X:150577718-150577775:+|nuORF'] 22737 9361 EVAAQNYR True NCI_RA007_Epitope_Rep4 949.4617437566499 949.46064993586 42.862 2 -1.3706891714659768 0.39091528177680074 1.0 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81'] 55365 15765 LASNERIAL True PC9_epitope_Rep3 985.5556441414899 985.55454993586 65.799 2 -1.3707323532098705 0.39091528177680074 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 58841 19965 LFRNGLQLI True PC9_epitope_Rep5 1072.6393141958 1072.63820993586 81.848 2 -1.3707804618705999 0.390946452892404 1.0 ['nc|ENSG00000010030|Q9Y603-6|ETV7', 'nc|ENSG00000010030|Q9Y603-5|ETV7'] 124245 24367 VLCPGLHS True H1975_Epitope_Rep1 824.4214591678001 824.42036993586 101.04 2 -1.370819152474684 0.3909537292570159 1.0 ['ENST00000431992.5_2_1:33789663-33789792:-|nuORF'] 55247 7914 LAQFRHSMSPR True H1975_Epitope_Rep1 1328.67717333984 1328.6760699358601 35.395 2 -1.3708572653074986 0.39095633474702823 1.0 ['ENST00000333617.8_1_3:115805179-115805335:-|nuORF'] 81545 6943 PRARMPCSP True NCI_RA007_Epitope_Rep1 1013.48989016413 1013.4893749679301 31.011 1 -1.3708821756482528 0.39095633474702823 1.0 ['ENST00000587374.5_3_17:73845777-73851378:-|nuORF'] 36154 23449 GVFFLFFG True PC9_epitope_Rep4 932.4796256669198 932.47907496793 98.483 1 -1.3709522575441033 0.39098750388263687 1.0 ['ENST00000545113.1_1_12:21654752-21659919:+|nuORF', 'ENST00000545093.5_1_12:21654752-21665258:+|nuORF', 'ENSG00000111711|ENST00000229314|GOLT1B'] 39146 5632 HLEETTQK True H1975_Epitope_Rep2 984.4876241513199 984.48652993586 26.663 2 -1.3710171414185088 0.3910186722735255 1.0 ['ENSG00000047410|ENST00000367478|TPR', 'TPR|p.L1186Qfs*2|1|0.23|ENSG00000047410|chr1:186343950-186343951|GA/-|frameshift_variant'] 116034 10490 TVRHSCLPLL True PC9_epitope_Rep2 1137.63284891637 1137.6312149037901 45.673 3 -1.3710689993865548 0.39102855094970734 1.0 ['ENST00000491165.5_2_3:113415279-113415423:-|nuORF'] 90993 22804 RLKAGHGG True PC9_epitope_Rep2 794.4511195032999 794.45002993586 93.204 2 -1.3710821643320439 0.39102855094970734 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 64150 6748 LQEVM[Oxidation]FTALI True H1975_Epitope_Rep1 1179.62094720043 1179.6198499358602 30.997 2 -1.3710907251669173 0.39102855094970734 1.0 ['nc|ENSG00000144481|Q7Z2W7-4|TRPM8', 'ENST00000444298.5_1_2:234856214-234923253:+|nuORF', 'ENSG00000144481|ENST00000324695|TRPM8', 'TRPM8|p.K472Sfs*11|1|0.35|ENSG00000144481|chr2:233960824-233960824|C/-|frameshift_variant'] 107698 5486 TALKMRIPVA True H1975_Epitope_Rep2 1098.65833538822 1098.6572299358602 26.116 2 -1.3711843013848861 0.391047771499564 1.0 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 108742 4115 TENELLQMFY True NCI_RA007_Epitope_Rep2 1286.58528958726 1286.5841899358602 20.647 2 -1.371245833266893 0.3910669915902141 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 87709 10631 QVEARVSTL True H1975_Epitope_Rep2 1001.5505587610498 1001.54946993586 45.915 2 -1.3712959850981599 0.3911059616096704 1.0 ['ENSG00000108798|ENST00000225941|ABI3'] 15442 14274 EANMDIVYKDM True H1975_Epitope_Rep3 1327.5788243078298 1327.5777299358601 60.248 2 -1.37130216962568 0.3911059616096704 1.0 ['ENSG00000050393|ENST00000379170|MCUR1'] 104169 2945 SSCCNPCC True NCI_RA007_Epitope_Rep1 815.20705192107 815.2065049679301 15.3 1 -1.3713160472235029 0.3911059616096704 1.0 ['ENSG00000244411|ENST00000398536|KRTAP5-7', 'ENSG00000204572|ENST00000398531|KRTAP5-10', 'ENSG00000241598|ENST00000399682|KRTAP5-4', 'nc|ENSG00000241598|Q6L8H1|KRTAP5-4'] 65972 12473 LSLRQVSHPRR True H1975_Epitope_Rep3 1347.7847496428699 1347.78364993586 53.171 2 -1.3713574486243654 0.3911059616096704 1.0 ['ENST00000545054.6_1_14:24563583-24563937:+|nuORF'] 98971 12762 SKGRVRRF True NCI_RA007_Epitope_Rep5 1004.5991807193199 1004.59808993586 55.762 2 -1.371366573680362 0.3911059616096704 1.0 ['ENST00000474518.1_1_6:10527835-10528955:+|nuORF', 'ENST00000475577.5_1_6:10527835-10626837:+|nuORF'] 32321 21008 GFYADPYLY True PC9_epitope_Rep6 1107.49131254943 1107.49020993586 93.632 2 -1.3713739053997143 0.3911059616096704 1.0 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217', 'KIAA1217|p.A407Pfs*73|1|0.23|ENSG00000120549|chr10:24473599-24473605|AGCCTCA/-|frameshift_variant'] 107965 8220 TC[Carbamidomethyl]ECVFPPAYT True H1975_Epitope_Rep3 1286.5311461188496 1286.5305749679299 36.601 1 -1.3714099273090212 0.3911059616096704 1.0 ['ENST00000599420.5_1_19:17312953-17313848:+|nuORF'] 51899 19451 KKRRHLTPT True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 81.706 2 -1.3714609857037885 0.3911085629650864 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 88777 4339 RDLHRQFPFHE True PC9_epitope_Rep2 1480.73237971684 1480.73074490379 22.037 3 -1.371463345596294 0.3911085629650864 1.0 ['ENST00000462073.5_1_22:30689736-30691829:-|nuORF', 'TBC1D10A|p.L418Pfs*87|1|0.14|ENSG00000099992|chr22:30292649-30292650|-/G|frameshift_variant', 'ENSG00000099992|ENST00000215790|TBC1D10A', 'nc|ENSG00000099992|Q9BXI6-2|TBC1D10A'] 133408 6909 WFSWVLPLTGP True H1975_Epitope_Rep1 1301.6808446546097 1301.6797499358602 31.617 2 -1.3715531074060185 0.3911423247814247 1.0 ['ENSG00000244476|ENST00000472091|ERVFRD-1'] 19069 4434 ELHAMLAK True H1975_Epitope_Rep3 911.48987308079 911.48876993586 22.177 2 -1.3716533400596076 0.3911423247814247 1.0 ['ADGRV1|p.P1502L|3|0.18|ENSG00000164199|chr5:90658031-90658031|C/T|missense_variant'] 133712 24238 WLGPAWPWRAK True PC9_epitope_Rep2 1366.7298605356998 1366.72876993586 98.772 2 -1.3716630229464937 0.3911423247814247 1.0 ['nc|ENSG00000165716|Q5VUD6-2|DIPK1B', 'ENSG00000165716|ENST00000371692|DIPK1B'] 136597 10914 YHYLNPYYKFI True NCI_RA007_Epitope_Rep4 1519.7499868435896 1519.74888993586 48.842 2 -1.3719088516133762 0.39118542848611526 1.0 ['SFSWAP|p.D246Y|1|0.18|ENSG00000061936|chr12:131725534-131725534|G/T|missense_variant'] 8287 18150 ATKYSHEEKG True PC9_epitope_Rep1 1148.5462016566 1148.5451099358602 74.604 2 -1.3719414850732672 0.3911880277568765 1.0 ['ENST00000414239.5_1_X:55744191-55748632:+|nuORF'] 41490 22464 ICILYVYI True PC9_epitope_Rep6 998.5510763550199 998.54996993586 99.402 2 -1.3720014214560894 0.3911880277568765 1.0 ['ENST00000407010.6_2_7:16128723-16129239:-|nuORF'] 16172 12750 EEETLEKHLRP True H1975_Epitope_Rep1 1379.7044932031497 1379.70338993586 54.103 2 -1.3721015183191703 0.39123112937129756 1.0 ['ENSG00000225830|ENST00000355832|ERCC6'] 66033 12200 LSMVFKKLEEH True PC9_epitope_Rep5 1359.72205784359 1359.72040490379 51.913 3 -1.3722424376249847 0.39125553843765304 1.0 ['ENST00000538168.5_1_18:44253896-44254184:-|nuORF'] 28736 6627 FSWFWFRLYWF True NCI_RA007_Epitope_Rep1 1683.8026911227896 1683.8010449037902 29.791 3 -1.3723229359745084 0.39125553843765304 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 27493 13655 FPDNFVKEIER True H1975_Epitope_Rep3 1392.70376492716 1392.70266993586 57.816 2 -1.3723386115748588 0.39125553843765304 1.0 ['CD2AP|p.K58E|1|0.23|ENSG00000198087|chr6:47533608-47533608|A/G|missense_variant'] 111384 12613 TLIVGKAL True PC9_epitope_Rep2 813.53238951577 813.53128993586 53.827 2 -1.37234469895777 0.39125553843765304 1.0 ['ENST00000485689.1_1_1:32682456-32683010:-|nuORF', 'ENSG00000160055|ENST00000309777|TMEM234', 'nc|ENSG00000160055|Q8WY98|TMEM234', 'nc|ENSG00000160055|Q8WY98-2|TMEM234'] 128808 11351 VSRQHKEFLR True NCI_RA007_Epitope_Rep5 1298.72075240398 1298.7196499358602 50.312 2 -1.3723690731660143 0.39125553843765304 1.0 ['nc|ENSG00000101958|P23416-3|GLRA2', 'nc|ENSG00000101958|P23416-2|GLRA2', 'ENSG00000101958|ENST00000218075|GLRA2'] 113685 7916 TRDEQEIEFL True PC9_epitope_Rep1 1278.6091958359798 1278.6075449037899 35.274 3 -1.3725373812767925 0.3912866935772804 1.0 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'JAKMIP1|p.T470Rfs*22|1|0.15|ENSG00000152969|chr4:6064903-6064903|T/-|frameshift_variant', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-6|JAKMIP1', 'nc|ENSG00000152969|Q96N16-5|JAKMIP1'] 99066 10609 SKYFHIKHRHW True H1975_Epitope_Rep3 1537.8054850874498 1537.8043899358602 45.876 2 -1.372576452685546 0.39129655946594694 1.0 ['OR5D16|p.T309S|1|0.37|ENSG00000205029|chr11:55839676-55839676|A/T|missense_variant'] 247 12516 AAGFPPHG True NCI_RA007_Epitope_Rep3 752.3605731634 752.35946993586 56.463 2 -1.3726009788839417 0.39129655946594694 1.0 ['ENSG00000015532|ENST00000017003|XYLT2', 'XYLT2|p.G529Afs*78|1|0.33|ENSG00000015532|chr17:50356606-50356606|C/-|frameshift_variant', 'nc|ENSG00000015532|Q9H1B5-2|XYLT2', 'XYLT2|p.V232Gfs*54|1|0.1|ENSG00000015532|chr17:50354465-50354466|-/C|frameshift_variant'] 22483 16236 ETHRRSLRNWQ True NCI_RA007_Epitope_Rep4 1481.7599914470097 1481.75888993586 70.411 2 -1.372723370444927 0.39129655946594694 1.0 ['ENST00000496607.5_1_21:47686374-47686602:-|nuORF'] 101040 13363 SLTLKSKD True PC9_epitope_Rep4 890.50729696674 890.50618993586 59.304 2 -1.3727870806702487 0.3913038286082782 1.0 ['ENST00000264246.7_1_3:119276596-119278392:-|nuORF'] 11477 11963 DGASRSSH True H1975_Epitope_Rep3 815.35219330767 815.35164496793 51.174 1 -1.3729220846871748 0.3913209620023405 1.0 ['nc|ENSG00000230246|P0DKV0-2|SPATA31C1', 'nc|ENSG00000230246|P0DKV0|SPATA31C1', 'nc|ENSG00000177910|B4DYI2|SPATA31C2'] 105131 5481 STLPQDKALET True NCI_RA007_Epitope_Rep2 1201.6190322436896 1201.61792993586 25.937 2 -1.3729930883842543 0.3913209620023405 1.0 ['ENSG00000177483|ENST00000316997|RBM44'] 91665 15572 RPFWMQRMMRS True PC9_epitope_Rep1 1524.7264491147198 1524.72534993586 64.721 2 -1.373040389443464 0.3913209620023405 1.0 ['ENST00000399325.2_1_X:133406709-133407198:+|nuORF'] 37429 24538 GWGHPPGAP True H1975_Epitope_Rep1 874.4085859849798 874.40748993586 101.69 2 -1.3730905573665804 0.3913209620023405 1.0 ['ENST00000425202.5_1_19:51162395-51162548:+|nuORF'] 26626 17303 FKRWNHRYDEW True NCI_RA007_Epitope_Rep2 1635.7694935015497 1635.7683899358601 72.042 2 -1.373231855144257 0.3913401717158449 1.0 ['ENSG00000025293|ENST00000374012|PHF20', 'ENST00000481202.5_1_20:34389438-34450945:+|nuORF', 'nc|ENSG00000025293|Q9BVI0-2|PHF20'] 79315 21625 PGKLEHSKAA True PC9_epitope_Rep6 1036.5665431783598 1036.5654499358602 96.064 2 -1.3733138881360558 0.3913474398165839 1.0 ['ENSG00000165097|ENST00000650836|KDM1B'] 121091 8677 VGGAGTSAR True H1975_Epitope_Rep3 774.3984152241 774.3978649679301 38.375 1 -1.3734238470330569 0.3913785897665532 1.0 ['ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1', 'ENST00000335730.6_1_18:44089558-44181581:-|nuORF'] 5402 20461 ALVPDELLK True PC9_epitope_Rep6 996.5855472874399 996.58444993586 91.418 2 -1.3734407378433169 0.39138118380359893 1.0 ['nc|ENSG00000086015|Q6P0Q8-2|MAST2', 'ENSG00000086015|ENST00000361297|MAST2'] 70325 22585 LYPLKYYTS True NCI_RA007_Epitope_Rep5 1146.59611197114 1146.5944649037901 94.055 3 -1.373442234919722 0.39138118380359893 1.0 ['ENST00000456533.1_1_7:7607061-7607097:+|nuORF'] 117055 13897 TYQRHYRNVFH True H1975_Epitope_Rep3 1519.74327875371 1519.74218993586 58.767 2 -1.3735516848405382 0.39143153948106846 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 55278 20118 LAQYLKGLEV True H1975_Epitope_Rep1 1132.6492101731599 1132.64810993586 83.716 2 -1.3735673013952752 0.39143153948106846 1.0 ['FBXL14|p.I138L|2|0.14|ENSG00000171823|chr12:1593655-1593655|T/A|missense_variant'] 117056 14180 TYQRHYRNVFH True NCI_RA007_Epitope_Rep2 1519.74327875371 1519.74218993586 59.819 2 -1.3737665437803932 0.39144607228570405 1.0 ['nc|ENSG00000125434|Q3KQZ1-3|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-2|SLC25A35', 'nc|ENSG00000125434|Q3KQZ1-4|SLC25A35', 'ENSG00000125434|ENST00000577745|SLC25A35'] 134615 15264 WWFLHKFRIYP True NCI_RA007_Epitope_Rep2 1591.8452246411098 1591.84412993586 64.068 2 -1.3738829713280851 0.39144607228570405 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B'] 20358 14213 EPHHRLLL True PC9_epitope_Rep3 1013.5770482924099 1013.57594993586 59.757 2 -1.3739402426301817 0.39146527844111184 1.0 ['ENST00000427063.6_1_10:29698519-29709436:+|nuORF', 'ENST00000608994.5_1_10:29698519-29707148:+|nuORF', 'ENST00000414457.5_1_10:29698519-29771805:+|nuORF', 'ENST00000413405.5_1_10:29698519-29776229:+|nuORF'] 83952 8165 QELEELRKSLQ True NCI_RA007_Epitope_Rep1 1371.73579333143 1371.7346899358602 35.758 2 -1.374009992630826 0.3914824012608052 1.0 ['TRIP11|p.S1808Afs*25|2|0.16|ENSG00000100815|chr14:91975208-91975208|C/-|frameshift_variant', 'nc|ENSG00000100815|Q15643-2|TRIP11', 'ENSG00000100815|ENST00000267622|TRIP11'] 122631 6617 VGTNCQEQ True H1975_Epitope_Rep2 877.3599811100498 877.35888993586 30.36 2 -1.3740146214248912 0.3914824012608052 1.0 ['ENSG00000164512|ENST00000341048|ANKRD55', 'nc|ENSG00000164512|Q3KP44-3|ANKRD55', 'nc|ENSG00000164512|Q3KP44-2|ANKRD55'] 17611 23325 EHMHNRFV True NCI_RA007_Epitope_Rep3 1068.4923326922801 1068.49122993586 101.3 2 -1.3740481402540254 0.3914824012608052 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000526572.5_1_11:67049183-67049837:+|nuORF', 'ENST00000416281.6_1_11:67048455-67049666:+|nuORF', 'ENSG00000100077|ENST00000324198|GRK3'] 88762 11462 RDGDRLWYENP True PC9_epitope_Rep5 1419.6531263366296 1419.6520299358601 49.087 2 -1.3740720995403193 0.3914824012608052 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 134833 12817 WYWRRTLGMQV True H1975_Epitope_Rep3 1494.75542366054 1494.7543299358601 54.519 2 -1.3741570731814003 0.39150160583593013 1.0 ['ENSG00000163686|ENST00000478253|ABHD6'] 16307 18335 EEIRMLIHKTE True NCI_RA007_Epitope_Rep5 1397.7336851564498 1397.73258993586 77.331 2 -1.374233302403282 0.39150419656395136 1.0 ['ENST00000463879.1_1_2:198001297-198175415:-|nuORF', 'nc|ENSG00000065413|Q8N8A2-5|ANKRD44', 'nc|ENSG00000065413|Q8N8A2-3|ANKRD44', 'ENSG00000065413|ENST00000282272|ANKRD44', 'nc|ENSG00000065413|Q8N8A2-2|ANKRD44'] 57566 7338 LELDTDGIW True PC9_epitope_Rep1 1060.50769088956 1060.5065899358601 33.038 2 -1.3742403530175367 0.39150419656395136 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF'] 66920 15026 LSYEELLQR True PC9_epitope_Rep5 1149.6029882567298 1149.60188993586 62.801 2 -1.3742575517966575 0.39150678716825255 1.0 ['nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 10227 5123 CFEPQLLRFFH True PC9_epitope_Rep5 1435.70707648579 1435.7054249037901 24.73 3 -1.3743506893878572 0.39150678716825255 1.0 ['ENSG00000131187|ENST00000253496|F12'] 9522 18981 AWWYYQYQRDK True H1975_Epitope_Rep3 1605.73646203777 1605.73536993586 79.601 2 -1.374411861566114 0.3915140517179628 1.0 ['nc|ENSG00000182132|Q9NZI2|KCNIP1'] 73311 7280 NEKYRLVV True PC9_epitope_Rep2 1019.5763795860698 1019.57528993586 33.39 2 -1.3744498727638124 0.3915213160942182 1.0 ['ENSG00000150054|ENST00000683449|MPP7', 'nc|ENSG00000150054|Q5T2T1-2|MPP7'] 19716 15415 ELSLAPGDVV True PC9_epitope_Rep4 998.5284263341399 998.5273299358599 67.226 2 -1.3745283326887088 0.3915239061660598 1.0 ['ENSG00000214193|ENST00000453908|SH3D21'] 59214 16727 LGGCHGGR True H1975_Epitope_Rep1 755.3496912098699 755.3491449679301 69.737 1 -1.3745505763185746 0.3915239061660598 1.0 ['ENST00000560486.2_1_15:100797173-100802589:-|nuORF'] 97138 5680 SFFFAYVGI True PC9_epitope_Rep2 1049.5222187548898 1049.52112993586 27.236 2 -1.3745585698234082 0.39153843398951854 1.0 ['ENST00000545024.1_5:69806308-69808341:+|nuORF'] 10304 5892 CHHLCSLQP True NCI_RA007_Epitope_Rep4 1036.45825568268 1036.4571499358601 29.286 2 -1.3745673959114124 0.39153843398951854 1.0 ['SVA_C_dup119|chr4:183818089-183819596:-|1.7262149826194688|0.0479649960045823|5.17|467.0|2|1|sense'] 87982 8071 QVRFQHPEENR True H1975_Epitope_Rep1 1438.7065588918197 1438.70546993586 35.989 2 -1.3746331160017056 0.39153893902497255 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN', 'nc|ENSG00000130518|Q9H0B3-2|IQCN', 'IQCN|p.V592Gfs*7|1|0.36|ENSG00000130518|chr19:18265765-18265766|-/C|frameshift_variant'] 39583 15528 HPKWPFKK True PC9_epitope_Rep6 1066.6076201446997 1066.6065299358602 71.906 2 -1.374663279072036 0.39153893902497255 1.0 ['nc|ENSG00000163378|Q5NDL2-3|EOGT', 'ENSG00000163378|ENST00000383701|EOGT'] 99656 10190 SLGAARPLP True H1975_Epitope_Rep3 880.5130510535199 880.51194993586 44.241 2 -1.3746995627579455 0.39153893902497255 1.0 ['ENST00000487192.1_1_2:242162779-242163565:+|nuORF'] 124587 21037 VLHAFPPC True PC9_epitope_Rep6 882.4421946123799 882.44108993586 93.739 2 -1.3747132069228671 0.39153893902497255 1.0 ['nc|ENSG00000162775|Q96T37-4|RBM15', 'nc|ENSG00000162775|Q96T37-2|RBM15', 'nc|ENSG00000162775|Q96T37-3|RBM15', 'ENSG00000162775|ENST00000369784|RBM15'] 91784 12599 RPLEDIEDSW True H1975_Epitope_Rep2 1258.5829810881398 1258.58188993586 53.559 2 -1.3747383093160146 0.39153893902497255 1.0 ['ENSG00000215529|ENST00000400522|EFCAB8'] 92665 15290 RRGGHGGA True H1975_Epitope_Rep3 766.3946672563399 766.39356993586 64.221 2 -1.3749087128247581 0.3915918640183346 1.0 ['ENST00000341116.7_1_22:37415816-37419821:+|nuORF'] 56948 12493 LEDVFLLWP True PC9_epitope_Rep3 1130.60119735158 1130.59954490379 53.079 3 -1.3749379499389434 0.3915918640183346 1.0 ['ENSG00000010319|ENST00000231721|SEMA3G'] 44369 14215 INALRRCFFWR True H1975_Epitope_Rep1 1480.7873924951598 1480.7862899358602 59.856 2 -1.374955177517507 0.3915918640183346 1.0 ['nc|ENSG00000001626|P13569-2|CFTR', 'ENSG00000001626|ENST00000003084|CFTR', 'CFTR|p.S858Efs*38|1|0.24|ENSG00000001626|chr7:117595007-117595008|-/A|frameshift_variant', 'nc|ENSG00000001626|P13569-3|CFTR'] 8328 5732 ATLPQESP True PC9_epitope_Rep4 841.41814760917 841.41704993586 28.873 2 -1.3749624432839924 0.3915918640183346 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3'] 33731 14147 GLRRRWAV True PC9_epitope_Rep3 1012.6042660997598 1012.60316993586 59.5 2 -1.3749960950597384 0.39162299915251203 1.0 ['ENST00000360089.8_1_1:158045972-158047847:+|nuORF'] 98294 10303 SIFNTWLWYK True H1975_Epitope_Rep1 1356.6866583110402 1356.68556993586 44.575 2 -1.375111112567114 0.3916421972355511 1.0 ['nc|ENSG00000211814|P0DPF4|TRAV35'] 91782 17243 RPLARVTS True NCI_RA007_Epitope_Rep5 898.53484912726 898.53374993586 73.099 2 -1.375143813192684 0.39166139486028717 1.0 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000486354.1_1_10:5488686-5494790:+|nuORF'] 65907 6925 LSLGLWWTFDR True H1975_Epitope_Rep1 1392.71902106848 1392.7173749037902 31.68 3 -1.3751649072433576 0.3916686560038195 1.0 ['ENST00000468307.1_1_7:155093355-155094128:+|nuORF', 'ENSG00000186480|ENST00000340368|INSIG1'] 76912 7697 NVLLFFPRYLI True NCI_RA007_Epitope_Rep2 1393.8121931773298 1393.81108993586 34.565 2 -1.375295908182085 0.39171172461536624 1.0 ['ENST00000407073.5_2_2:149216331-149221335:+|nuORF'] 86138 7064 QPRWWYWPMSW True NCI_RA007_Epitope_Rep2 1621.72887455953 1621.72723490379 32.1 3 -1.3753409161678243 0.3917189849848416 1.0 ['ENST00000584716.1_1_17:30815096-30816294:+|nuORF'] 82296 26261 PTPPDELLPQA True PC9_epitope_Rep2 1176.60265390356 1176.60100490379 107.14 3 -1.3754188147273518 0.39172156975078776 1.0 ['nc|ENSG00000007171|P35228-2|NOS2', 'chr17:27789688-27793588|304|24.82|0.71|5.12|-|ENST00000646938|NOS2,NOS2', 'ENSG00000007171|ENST00000313735|NOS2'] 3973 13468 AHEQIALL True PC9_epitope_Rep2 893.4970666362099 893.49596993586 57.083 2 -1.3754376510441144 0.39172156975078776 1.0 ['nc|ENSG00000164308|Q6P179-3|ERAP2', 'ENSG00000164308|ENST00000437043|ERAP2', 'nc|ENSG00000164308|Q6P179-2|ERAP2', 'nc|ENSG00000164308|Q6P179-4|ERAP2'] 19141 22633 ELIREVYEYWI True PC9_epitope_Rep5 1511.76603083055 1511.7649299358602 92.058 2 -1.3756488819311103 0.39172882974279405 1.0 ['ENSG00000120616|ENST00000319778|EPC1', 'nc|ENSG00000120616|Q9H2F5|EPC1', 'nc|ENSG00000120616|Q9H2F5-3|EPC1', 'ENST00000495790.1_1_10:32581422-32635732:-|nuORF'] 59527 11791 LGPVPVRPP True H1975_Epitope_Rep2 930.56508662638 930.56398993586 50.428 2 -1.375739882930264 0.39172932330827065 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant'] 35058 10240 GRFREMLRWFL True H1975_Epitope_Rep3 1509.8027082061296 1509.8016099358601 44.436 2 -1.3757557152116062 0.39172932330827065 1.0 ['nc|ENSG00000141867|O60885-3|BRD4'] 101038 16146 SLTLKDRMW True PC9_epitope_Rep1 1148.60121443492 1148.60010993586 66.919 2 -1.3757877764259188 0.39172932330827065 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 97280 14601 SFQNLGIQCV True PC9_epitope_Rep5 1107.5382798251899 1107.5371899358602 61.164 2 -1.3758034269720392 0.39172932330827065 1.0 ['nc|ENSG00000173039|Q04206-2|RELA', 'nc|ENSG00000173039|Q04206-3|RELA', 'nc|ENSG00000173039|Q04206-4|RELA', 'ENST00000531484.5_1_11:65421851-65429483:-|nuORF', 'ENSG00000173039|ENST00000406246|RELA'] 121432 7652 VGIFTPNNSS True NCI_RA007_Epitope_Rep2 1034.50327421546 1034.5021699358601 34.39 2 -1.3758291081973617 0.39172932330827065 1.0 ['ENST00000602308.1_1_1:228584351-228584825:-|nuORF', 'nc|ENSG00000154370|Q96F44-2|TRIM11'] 78691 21288 PEDSLLIAK True PC9_epitope_Rep1 984.54916177872 984.54806993586 86.71 2 -1.3758612359252125 0.39173190758067594 1.0 ['CUX2|p.S1155Afs*9|1|0.34|ENSG00000111249|chr12:111341853-111341853|C/-|frameshift_variant', 'ENSG00000111249|ENST00000261726|CUX2'] 25899 13583 FGKGYGKN True PC9_epitope_Rep1 869.4395517600899 869.43844993586 57.103 2 -1.3758853009637548 0.39173190758067594 1.0 ['SLC12A3|p.E912*|1|0.29|ENSG00000070915|chr16:56902382-56902383|-/T|frameshift_variant', 'ENSG00000070915|ENST00000563236|SLC12A3', 'nc|ENSG00000070915|P55017-3|SLC12A3', 'nc|ENSG00000070915|P55017-2|SLC12A3'] 20910 11038 EQTKKVVYA True H1975_Epitope_Rep1 1064.5866099165999 1064.58550993586 47.42 2 -1.376000557903041 0.39173449172971814 1.0 ['ENSG00000130997|ENST00000511885|POLN', 'ENST00000514858.5_1_4:2082849-2194957:-|nuORF', 'POLN|p.V684M|1|0.29|ENSG00000130997|chr4:2095866-2095866|C/T|missense_variant'] 35956 16601 GVASEHMKRF True NCI_RA007_Epitope_Rep3 1160.5760623162398 1160.57496993586 73.083 2 -1.376022192013809 0.39173449172971814 1.0 ['ENSG00000171747|ENST00000307751|LGALS4'] 24807 6951 FCLAFIGK True PC9_epitope_Rep3 897.4782457679299 897.47714993586 31.749 2 -1.376100669457713 0.3917349849043545 1.0 ['nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 66652 5455 LSSSGGAVR True NCI_RA007_Epitope_Rep2 832.44028003608 832.43918993586 25.838 2 -1.3761230380282525 0.3917349849043545 1.0 ['ENST00000316715.8_1_X:13789363-13789450:-|nuORF'] 8091 19879 ATELLIVVK True PC9_epitope_Rep4 984.6219327961599 984.62082993586 84.597 2 -1.3761281601798134 0.3917349849043545 1.0 ['ENST00000526878.5_1_11:460175-490579:+|nuORF', 'ENSG00000174915|ENST00000308020|PTDSS2'] 118312 20693 VDDYQMDF True PC9_epitope_Rep6 1031.3906125319897 1031.3895099358601 92.359 2 -1.376338540882655 0.3917349849043545 1.0 ['ENSG00000116688|ENST00000235329|MFN2', 'nc|ENSG00000116688|O95140-2|MFN2'] 108201 6140 TDYHVRVYA True H1975_Epitope_Rep2 1122.54580773378 1122.54415490379 28.596 3 -1.3763405996322704 0.3917349849043545 1.0 ['ENSG00000075420|ENST00000415807|FNDC3B', 'nc|ENSG00000075420|Q53EP0-2|FNDC3B', 'ENST00000469491.5_1_3:171830269-172055226:+|nuORF'] 23422 7929 EVVQSQRV True PC9_epitope_Rep4 943.5086939490699 943.50758993586 37.931 2 -1.3764006135587217 0.39174273611359706 1.0 ['nc|ENSG00000093009|O75419-2|CDC45', 'ENSG00000093009|ENST00000263201|CDC45', 'nc|ENSG00000093009|O75419-3|CDC45'] 4934 11845 ALHLHLIV True PC9_epitope_Rep5 914.57017200682 914.5690699358599 50.561 2 -1.3764042786832908 0.39174273611359706 1.0 ['ENSG00000204347|ENST00000375366|BTBD17'] 103028 18903 SQKMSVWILLL True NCI_RA007_Epitope_Rep3 1316.75262969588 1316.7509849037901 82.643 3 -1.3764558569966148 0.39174273611359706 1.0 ['GABRG2|p.T24S|1|0.18|ENSG00000113327|chr5:162068069-162068069|A/T|missense_variant'] 80822 16001 PLTLSPAAPA True PC9_epitope_Rep4 936.5280324113198 936.52748496793 69.48 1 -1.3764907593872506 0.39174273611359706 1.0 ['ENST00000358600.7_1_19:14492235-14499295:+|nuORF', 'ENST00000599423.5_1_19:14879714-14887649:-|nuORF'] 60917 25621 LKVSRPRAP True NCI_RA007_Epitope_Rep1 1022.6348975216998 1022.6338099358601 106.04 2 -1.3766134779917303 0.39174273611359706 1.0 ['ENST00000370339.7_1_20:61834750-61835101:-|nuORF', 'nc|ENSG00000149658|Q9BYJ9-2|YTHDF1'] 34828 7854 GQVGEGRGD True PC9_epitope_Rep6 873.3940581196499 873.39296993586 39.61 2 -1.376624625466023 0.39174273611359706 1.0 ['ENST00000274031.7_1_4:140477471-140477915:-|nuORF'] 128502 25085 VSFYYAPF True PC9_epitope_Rep3 992.4643695255997 992.46326993586 101.84 2 -1.3768002202490688 0.3917977233133666 1.0 ['ENSG00000203663|ENST00000641771|OR2L2'] 14288 9300 DTAHCMQH True H1975_Epitope_Rep1 941.3483708805302 941.34726993586 40.681 2 -1.3768900713761616 0.39181272594943506 1.0 ['ENST00000309415.7_1_2:110261380-110261551:+|nuORF'] 5307 4737 ALSGAAETK True NCI_RA007_Epitope_Rep2 846.4446967101801 846.44358993586 23.056 2 -1.3769023994704135 0.39181272594943506 1.0 ['nc|ENSG00000139192|Q9BX59-3|TAPBPL', 'ENSG00000139192|ENST00000266556|TAPBPL', 'nc|ENSG00000139192|Q9BX59-2|TAPBPL', 'nc|ENSG00000139192|Q9BX59-7|TAPBPL', 'nc|ENSG00000139192|Q9BX59-5|TAPBPL', 'nc|ENSG00000139192|Q9BX59-4|TAPBPL', 'nc|ENSG00000139192|Q9BX59-6|TAPBPL'] 119216 14154 VEKPYGRKRKK True H1975_Epitope_Rep1 1387.8412018898296 1387.84010993586 59.617 2 -1.376938546370408 0.39181272594943506 1.0 ['ENST00000581758.1_1_18:9182415-9208777:+|nuORF'] 15561 12741 EASVSALGLLP True H1975_Epitope_Rep3 1055.5862755634298 1055.5851699358602 54.22 2 -1.3769965509064892 0.39181272594943506 1.0 ['ENST00000254480.9_1_3:47755977-47762221:-|nuORF'] 133113 13499 WAWPRTPWRRW True NCI_RA007_Epitope_Rep1 1596.8214695047598 1596.82036993586 56.513 2 -1.3771136747142951 0.39181272594943506 1.0 ['ENST00000608648.1_1_19:18235548-18239224:+|nuORF'] 94191 7687 RWLWWQPWWWK True NCI_RA007_Epitope_Rep1 1756.8779217517197 1756.87627490379 33.894 3 -1.3771204341098942 0.39181272594943506 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1'] 32565 24290 GGWAGGNA True H1975_Epitope_Rep2 688.2928875263999 688.2923349679301 99.956 1 -1.3771351864682246 0.39181272594943506 1.0 ['nc|ENSG00000151552|P09417-2|QDPR', 'ENSG00000151552|ENST00000281243|QDPR'] 72968 3869 NCPSFALH True PC9_epitope_Rep1 887.3959726959499 887.39486993586 19.79 2 -1.3771698471549292 0.3918319135228005 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 60705 14353 LIYKVRIE True PC9_epitope_Rep1 1032.6331661861998 1032.63206993586 60.033 2 -1.3772285494077974 0.39186867722847873 1.0 ['ENSG00000167210|ENST00000642948|LOXHD1', 'nc|ENSG00000167210|Q8IVV2|LOXHD1'] 69679 12377 LVWLLLIFH True H1975_Epitope_Rep2 1152.70593720364 1152.70429490379 52.695 3 -1.377228595679432 0.39186867722847873 1.0 ['nc|ENSG00000290203|Q96PH1-4|NOX5', 'nc|ENSG00000290203|Q96PH1-6|NOX5', 'nc|ENSG00000290203|Q96PH1-3|NOX5', 'nc|ENSG00000290203|Q96PH1-2|NOX5', 'ENSG00000255346|ENST00000388866|NOX5', 'nc|ENSG00000290203|Q96PH1-5|NOX5', 'ENST00000527315.5_1_15:69323805-69349033:+|nuORF'] 87306 16720 QSVKHALR True NCI_RA007_Epitope_Rep4 937.5457481641298 937.54464993586 72.497 2 -1.3772705794932814 0.39186867722847873 1.0 ['ENSG00000069956|ENST00000261845|MAPK6'] 131036 17686 VVLLLDDL True NCI_RA007_Epitope_Rep1 898.53753446586 898.53642993586 72.932 2 -1.3773132528055467 0.39186867722847873 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 13766 2376 DQNLQELEKW True H1975_Epitope_Rep1 1301.6251802532897 1301.62354490379 12.27 3 -1.377348983942757 0.39186867722847873 1.0 ['ENSG00000166741|ENST00000299964|NNMT', 'ENST00000546313.1_1_11:114167278-114168881:+|nuORF'] 79501 5682 PGQAERASL True PC9_epitope_Rep3 927.4773938207899 927.47628993586 26.928 2 -1.3774411899342334 0.39186867722847873 1.0 ['ENST00000322048.11_1_16:4852562-4852868:-|nuORF'] 100998 7667 SLSYSLAER True NCI_RA007_Epitope_Rep5 1024.5189242795998 1024.5178299358602 36.194 2 -1.3774548586551283 0.39186867722847873 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1-LYPLA1|1|fusion', 'ENST00000476350.1_1_1:39768622-39838291:+|nuORF', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 64317 576 LQMNKEDKVW True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 3.1337 3 -1.3774771292919494 0.39186867722847873 1.0 ['nc|ENSG00000112701|Q9GZR1-2|SENP6', 'ENSG00000112701|ENST00000447266|SENP6'] 126645 9221 VPQLTRPGSFL True PC9_epitope_Rep2 1213.68190728377 1213.68080993586 40.808 2 -1.377504289838028 0.39186867722847873 1.0 ['nc|ENSG00000116641|Q96N67-4|DOCK7', 'nc|ENSG00000116641|Q96N67-3|DOCK7', 'nc|ENSG00000116641|Q96N67-5|DOCK7', 'nc|ENSG00000116641|Q96N67-2|DOCK7', 'nc|ENSG00000116641|Q96N67-6|DOCK7', 'ENSG00000116641|ENST00000635253|DOCK7'] 119441 15604 VEPKRTVSRED True NCI_RA007_Epitope_Rep1 1314.6891774921799 1314.68808993586 64.785 2 -1.3775063714732279 0.39186867722847873 1.0 ['ENST00000457695.2_1_X:100110922-100111255:-|nuORF'] 86855 19324 QRQQLLVS True NCI_RA007_Epitope_Rep5 970.5559784946598 970.55488993586 81.205 2 -1.3775931439780171 0.391873836904137 1.0 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 114211 24035 TRVIKLAH True PC9_epitope_Rep5 936.5868847001198 936.58578993586 97.433 2 -1.3776153196620742 0.391873836904137 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 62976 7174 LNEKLDRED True PC9_epitope_Rep3 1130.5567663402999 1130.5556699358601 32.606 2 -1.3776212813707474 0.391873836904137 1.0 ['ENSG00000120322|ENST00000239444|PCDHB8', 'ENSG00000187372|ENST00000341948|PCDHB13'] 73464 8791 NEVKNYER True NCI_RA007_Epitope_Rep1 1050.5094222250598 1050.5088749679298 38.197 1 -1.3776457269962337 0.391873836904137 1.0 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000493691.1_1_6:7410621-7411705:+|nuORF'] 83542 11390 QDLTRTQMEL True H1975_Epitope_Rep1 1233.6023366337301 1233.6012299358601 48.79 2 -1.377674569483028 0.39187690105564504 1.0 ['nc|ENSG00000102904|Q2TAA8|TSNAXIP1', 'ENSG00000102904|ENST00000561639|TSNAXIP1', 'ENST00000565339.5_1_16:67848301-67859829:+|nuORF', 'ENST00000487120.5_1_16:67848301-67859829:+|nuORF', 'ENST00000466164.5_1_16:67840937-67859829:+|nuORF'] 63852 10102 LPTSSSSRLL True H1975_Epitope_Rep3 1059.5924235730301 1059.5913299358601 43.899 2 -1.3777242895125799 0.39187690105564504 1.0 ['ENST00000555137.5_1_14:21731481-21737553:-|nuORF', 'ENST00000554969.5_1_14:21731935-21737553:-|nuORF', 'ENST00000554891.5_1_14:21702949-21737544:-|nuORF', 'ENST00000555883.5_1_14:21702257-21737553:-|nuORF', 'ENST00000554383.5_3_14:21702260-21737544:-|nuORF'] 95951 5250 SDYSFSVIAMS True PC9_epitope_Rep5 1205.52744035797 1205.52580490379 25.211 3 -1.377780224788549 0.39187690105564504 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 96803 8429 SESDFRDKH True NCI_RA007_Epitope_Rep1 1119.49450043691 1119.4934099358602 36.789 2 -1.377797913235547 0.39187690105564504 1.0 ['ENST00000355301.8_2_2:110920698-110922295:-|nuORF'] 7246 15148 ARKAHVAT True NCI_RA007_Epitope_Rep5 852.49298431528 852.49188993586 64.947 2 -1.3778362930907244 0.39187690105564504 1.0 ['ENSG00000178163|ENST00000326756|ZNF518B'] 58344 7332 LEVAGPGREP True H1975_Epitope_Rep2 1023.5349086969098 1023.53380993586 33.143 2 -1.3778460480097512 0.39187690105564504 1.0 ['ENST00000566982.1_1_16:75263411-75272069:-|nuORF', 'nc|ENSG00000050820|P56945-4|BCAR1', 'nc|ENSG00000050820|P56945-5|BCAR1', 'nc|ENSG00000050820|P56945-8|BCAR1', 'ENSG00000050820|ENST00000162330|BCAR1', 'nc|ENSG00000050820|P56945-7|BCAR1', 'nc|ENSG00000050820|P56945-3|BCAR1', 'nc|ENSG00000050820|P56945-2|BCAR1', 'nc|ENSG00000050820|P56945-6|BCAR1'] 36951 13080 GVRGAQPH True PC9_epitope_Rep3 820.4303840587199 820.42928993586 55.337 2 -1.3778593241788164 0.39187690105564504 1.0 ['AHRR|p.H589Y|1|0.23|ENSG00000063438|chr5:434505-434505|C/T|missense_variant', 'ENSG00000063438|ENST00000684583|AHRR', 'nc|ENSG00000063438|A9YTQ3|AHRR', 'nc|ENSG00000063438|A9YTQ3-3|AHRR', 'nc|ENSG00000063438|A9YTQ3-2|AHRR'] 26980 11169 FLKSRSSV True PC9_epitope_Rep3 922.52361573722 922.52250993586 47.963 2 -1.3778738070988592 0.3918794804203395 1.0 ['ENST00000540159.3_1_10:133783899-133784124:-|nuORF'] 44370 14208 INALRRCFFWR True H1975_Epitope_Rep3 1480.7873924951598 1480.7862899358602 59.989 2 -1.377873998459727 0.3918794804203395 1.0 ['nc|ENSG00000001626|P13569-2|CFTR', 'ENSG00000001626|ENST00000003084|CFTR', 'CFTR|p.S858Efs*38|1|0.24|ENSG00000001626|chr7:117595007-117595008|-/A|frameshift_variant', 'nc|ENSG00000001626|P13569-3|CFTR'] 103209 18460 SQRIQRPGR True NCI_RA007_Epitope_Rep5 1096.62137271588 1096.62026993586 77.833 2 -1.3778924881736039 0.3918825437717666 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 60935 23899 LKYLNKIKPP True NCI_RA007_Epitope_Rep3 1212.7594293284799 1212.75778490379 103.55 3 -1.3779266656547138 0.3918825437717666 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 133989 25196 WPPFLRGLR True PC9_epitope_Rep1 1140.6556329662799 1140.65398490379 101.8 3 -1.3779361707356854 0.3918825437717666 1.0 ['ENSG00000163792|ENST00000296096|TCF23'] 43778 18085 IIYPSFHP True PC9_epitope_Rep1 972.5069030439199 972.50580993586 74.358 2 -1.3780179375711672 0.3918825437717666 1.0 ['ENST00000474550.5_1_2:101601378-101601966:+|nuORF'] 124715 22294 VLKKKKKKKK True H1975_Epitope_Rep2 1254.92274668582 1254.9211049037901 92.133 3 -1.3780473340209314 0.3918825437717666 1.0 ['ENST00000522197.1_1_8:122652185-122654912:+|nuORF', 'ENST00000514180.5_1_8:122652059-122653623:+|nuORF'] 43801 21117 IKKETKGKGS True PC9_epitope_Rep6 1074.6397081186199 1074.6386099358601 94.066 2 -1.3780575769921461 0.3918825437717666 1.0 ['ENSG00000126524|ENST00000246868|SBDS'] 78755 14529 PEHKYPSLH True PC9_epitope_Rep3 1106.55089311422 1106.5497899358602 61.007 2 -1.3780581188805519 0.3918825437717666 1.0 ['ENSG00000152192|ENST00000377208|POU4F1'] 86640 24875 QRERQKGLPRQ True H1975_Epitope_Rep2 1394.78547791886 1394.7843899358602 102.25 2 -1.3780695322804384 0.3918851227249958 1.0 ['ENSG00000130158|ENST00000294618|DOCK6', 'ENST00000585609.1_1_19:11362722-11362998:-|nuORF'] 33859 12504 GLVLWAGAFY True NCI_RA007_Epitope_Rep3 1095.5753169569098 1095.5742099358602 56.415 2 -1.3780837297999733 0.3918851227249958 1.0 ['ENSG00000135587|ENST00000258052|SMPD2'] 121619 19039 VGLEKPSLEP True H1975_Epitope_Rep3 1067.58627556343 1067.5851699358602 79.839 2 -1.378123846964144 0.39189962789810134 1.0 ['ENSG00000149782|ENST00000279230|PLCB3', 'nc|ENSG00000149782|Q01970-2|PLCB3'] 103894 20435 SRLPRRPKP True H1975_Epitope_Rep2 1105.68324469645 1105.68214993586 84.667 2 -1.378123855698963 0.39189962789810134 1.0 ['ENSG00000221821|ENST00000408925|C6orf226'] 44177 14098 ILQWLTLPDHE True H1975_Epitope_Rep1 1363.7136013348702 1363.71250993586 59.396 2 -1.3781564218193727 0.3919068802251667 1.0 ['ENSG00000136960|ENST00000075322|ENPP2', 'nc|ENSG00000136960|Q13822-3|ENPP2', 'nc|ENSG00000136960|Q13822-2|ENPP2'] 32769 9918 GIAQWAIPV True NCI_RA007_Epitope_Rep5 953.5334521449298 953.53234993586 44.792 2 -1.3782196739726276 0.39191203654013573 1.0 ['ENSG00000112333|ENST00000368986|NR2E1', 'nc|ENSG00000112333|Q9Y466-2|NR2E1'] 65681 6112 LSHEEHPH True H1975_Epitope_Rep2 984.44134266524 984.44024993586 28.489 2 -1.3782460381945632 0.39191203654013573 1.0 ['nc|ENSG00000285708|Q9H334-6|FOXP1', 'nc|ENSG00000285708|Q9H334-3|FOXP1', 'nc|ENSG00000285708|Q9H334-7|FOXP1', 'ENSG00000114861|ENST00000649528|FOXP1', 'nc|ENSG00000285708|Q9H334-4|FOXP1', 'nc|ENSG00000285708|Q9H334-8|FOXP1'] 51815 20333 KKKKKTKAP True PC9_epitope_Rep6 1055.7178988696699 1055.71680993586 90.915 2 -1.3782529956955443 0.39191203654013573 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 42816 15115 IFKIYIVLWYR True PC9_epitope_Rep4 1512.8856924707597 1512.88458993586 66.069 2 -1.3782603867954624 0.39191203654013573 1.0 ['IL1RL2|p.D362Y|1|0.12|ENSG00000115598|chr2:102225990-102225990|G/T|missense_variant'] 76030 21714 NRKLIYNFK True PC9_epitope_Rep6 1194.6873270173799 1194.68569490379 96.409 3 -1.3783271803342418 0.3919192882867842 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF', 'ENSG00000125900|ENST00000381623|SIRPD'] 15893 4719 EDQEEDECRTT True H1975_Epitope_Rep3 1353.4990533336497 1353.49794993586 23.277 2 -1.3783807875756156 0.3919384652077992 1.0 ['ENSG00000149292|ENST00000529221|TTC12', 'nc|ENSG00000149292|Q9H892-2|TTC12', 'ENST00000489064.5_1_11:113186979-113194793:+|nuORF', 'ENST00000527781.1_1_11:113186979-113196409:+|nuORF', 'TTC12|p.I266Lfs*4|3|0.19|ENSG00000149292|chr11:113339438-113339438|G/-|frameshift_variant'] 83924 9079 QEKERLEEKQR True NCI_RA007_Epitope_Rep1 1471.7743040984699 1471.7732099358602 39.315 2 -1.3785567332699618 0.3919482935438479 1.0 ['nc|ENSG00000130703|Q9H1P3-2|OSBPL2', 'ENSG00000130703|ENST00000313733|OSBPL2', 'ENST00000471817.2_1_20:60866739-60868940:+|nuORF'] 106122 22943 SVNPIIYAF True PC9_epitope_Rep2 1022.54368247546 1022.5425899358601 93.747 2 -1.3785855664397824 0.3919482935438479 1.0 ['GALR1|p.S296Y|1|0.3|ENSG00000166573|chr18:77268739-77268739|C/A|missense_variant', 'GALR1|p.K312Rfs*17|1|0.31|ENSG00000166573|chr18:77268786-77268786|A/-|frameshift_variant', 'ENSG00000166573|ENST00000299727|GALR1'] 122636 14839 VGTNGGLK True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 63.748 1 -1.3788583166702986 0.3919482935438479 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 125356 22928 VLSPPCWAPHS True PC9_epitope_Rep6 1192.56991430664 1192.5688099358601 101.3 2 -1.378896723777313 0.3919674692042595 1.0 ['nc|ENSG00000180422|Q8N9R0|LINC00304'] 12267 6161 DISAEIQQR True NCI_RA007_Epitope_Rep2 1058.5356369729 1058.53452993586 28.573 2 -1.37894065305127 0.39197262201447597 1.0 ['nc|ENSG00000140464|P29590-3|PML', 'nc|ENSG00000140464|P29590-8|PML', 'nc|ENSG00000140464|P29590-4|PML', 'nc|ENSG00000140464|P29590-2|PML', 'nc|ENSG00000140464|P29590-5|PML', 'nc|ENSG00000140464|P29590-9|PML', 'nc|ENSG00000140464|P29590-13|PML', 'ENSG00000140464|ENST00000268058|PML', 'nc|ENSG00000140464|P29590-14|PML', 'nc|ENSG00000140464|P29590-10|PML', 'nc|ENSG00000140464|P29590-12|PML', 'nc|ENSG00000140464|P29590-11|PML', 'ENST00000564725.1_1_15:74290377-74317280:+|nuORF'] 60501 10303 LINNLGAI True PC9_epitope_Rep5 826.4912529797799 826.49014993586 44.618 2 -1.378950639516471 0.39197262201447597 1.0 ['nc|ENSG00000282100|Q58FF6|HSP90AB4P'] 133975 23748 WPKDVNPLE True PC9_epitope_Rep1 1096.5553097883198 1096.5542099358602 96.14 2 -1.378971764526369 0.39197262201447597 1.0 ['DNAI2|p.V460Cfs*36|1|0.25|ENSG00000171595|chr17:74310045-74310045|G/-|frameshift_variant', 'nc|ENSG00000171595|Q9GZS0-2|DNAI2', 'ENSG00000171595|ENST00000311014|DNAI2'] 120391 6376 VFSFRWFVHDF True NCI_RA007_Epitope_Rep3 1485.7193554216499 1485.71824993586 32.081 2 -1.3789922645015589 0.39197262201447597 1.0 ['XKR4|p.I597Mfs*25|1|0.35|ENSG00000206579|chr8:55524064-55524064|T/-|frameshift_variant', 'ENSG00000206579|ENST00000327381|XKR4'] 99644 7176 SLFWALAP True PC9_epitope_Rep1 903.4854393233499 903.48434993586 32.413 2 -1.3791630161308943 0.3920041970215455 1.0 ['ENST00000569796.1_1_16:2282158-2283271:+|nuORF'] 52571 25093 KPVQGGGL True PC9_epitope_Rep1 754.4337381036598 754.4331849679301 101.41 1 -1.3791658230089339 0.3920041970215455 1.0 ['NCOA1|p.L960P|1|0.2|ENSG00000084676|chr2:24728469-24728469|T/C|missense_variant'] 110510 13313 TIQIPEHL True PC9_epitope_Rep1 949.52328138405 949.52218993586 56.07 2 -1.379229777618281 0.3920041970215455 1.0 ['ENSG00000266412|ENST00000581486|NCOA4', 'nc|ENSG00000266412|Q13772-3|NCOA4', 'nc|ENSG00000266412|Q13772-4|NCOA4', 'nc|ENSG00000266412|Q13772-2|NCOA4'] 40194 16207 HRFWYNYRQRK True NCI_RA007_Epitope_Rep2 1652.84366150132 1652.8425699358602 67.771 2 -1.3792357429554483 0.3920041970215455 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 137567 15430 YLSIPAVFFL True PC9_epitope_Rep3 1168.6532329244399 1168.65212993586 64.506 2 -1.3792542732665447 0.3920041970215455 1.0 ['nc|ENSG00000288705|P35504|UGT1A5', 'nc|ENSG00000288705|P35504-2|UGT1A5'] 30899 13684 GARSWGSRDVY True NCI_RA007_Epitope_Rep5 1252.5948831845199 1252.59378993586 59.319 2 -1.3792571157172262 0.3920041970215455 1.0 ['ENST00000361396.6_1_13:96295902-96296766:-|nuORF'] 115177 6770 TVALSQQIR True PC9_epitope_Rep3 1014.5821932424999 1014.58108993586 31.062 2 -1.3793604801722898 0.39202336950041733 1.0 ['ENSG00000180530|ENST00000318948|NRIP1'] 3533 6203 AGLVWWFHR True NCI_RA007_Epitope_Rep4 1170.60868277386 1170.60758993586 30.469 2 -1.3794198241145421 0.3920259442960702 1.0 ['ENST00000261951.8_1_5:179921647-179956302:+|nuORF', 'ENST00000393356.5_1_5:179921647-179922490:+|nuORF'] 121741 17479 VGLRWRPL True NCI_RA007_Epitope_Rep2 995.6028691174299 995.60176993586 72.72 2 -1.3794314630052955 0.3920259442960702 1.0 ['ENST00000592685.5_1_19:10570095-10570353:+|nuORF', 'ENST00000591971.5_1_19:10570113-10572229:+|nuORF'] 57343 14429 LEGVLGTL True PC9_epitope_Rep3 800.4643695256 800.46326993586 60.606 2 -1.3795073476121822 0.3920285189689296 1.0 ['ENST00000401813.7_1_1:2130482-2130731:-|nuORF'] 80877 11046 PLVWNHFCM True PC9_epitope_Rep2 1145.5150422828099 1145.51338490379 47.808 3 -1.3795282257941837 0.3920285189689296 1.0 ['nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'ENSG00000197748|ENST00000357060|CFAP43'] 479 17053 AANLYQVFIK True NCI_RA007_Epitope_Rep1 1165.6495445263297 1165.64844993586 70.462 2 -1.379549565340396 0.39204769001490314 1.0 ['ENSG00000141968|ENST00000602142|VAV1', 'nc|ENSG00000141968|P15498-2|VAV1', 'ENST00000594082.1_1_19:6822465-6826923:+|nuORF'] 2739 5388 AETWDFFF True PC9_epitope_Rep3 1061.4494477374499 1061.44834993586 25.799 2 -1.3796126025722484 0.392062186296601 1.0 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000432916.5_1_22:45122508-45132738:+|nuORF', 'nc|ENSG00000186654|P85299-2|PRR5', 'nc|ENSG00000186654|P85299-4|PRR5', 'ENST00000455389.3_1_22:45126703-45133124:+|nuORF', 'ENST00000495017.5_1_22:45127230-45133124:+|nuORF'] 31061 8919 GAVSSSPREL True PC9_epitope_Rep4 1001.51417325233 1001.51306993586 41.848 2 -1.3796344374741087 0.392062186296601 1.0 ['ENSG00000119917|ENST00000371818|IFIT3'] 67915 12042 LTLDTWEP True H1975_Epitope_Rep1 973.47566248529 973.47511496793 51.33 1 -1.3796854597072998 0.3920792551352511 1.0 ['ENSG00000114331|ENST00000326793|ACAP2', 'ENST00000475905.5_1_3:195016371-195022834:-|nuORF'] 93917 19393 RVIQRILEH True H1975_Epitope_Rep1 1162.69347502698 1162.69183490379 80.777 3 -1.3797593150013188 0.3920792551352511 1.0 ['PUM2|p.A967Cfs*5|1|0.15|ENSG00000055917|chr2:20253986-20253987|-/A|frameshift_variant', 'ENSG00000055917|ENST00000361078|PUM2', 'nc|ENSG00000055917|Q8TB72|PUM2', 'nc|ENSG00000055917|Q8TB72-2|PUM2', 'nc|ENSG00000055917|Q8TB72-4|PUM2', 'nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 44843 13093 IPYEFNETDLR True H1975_Epitope_Rep1 1395.66704506527 1395.66594993586 55.451 2 -1.3797740794616447 0.3920792551352511 1.0 ['ENSG00000118997|ENST00000312428|DNAH7', 'nc|ENSG00000118997|Q8WXX0-2|DNAH7'] 6168 24616 APPLRQPLRR True PC9_epitope_Rep4 1202.7360085453 1202.73490993586 103.18 2 -1.3797741875411178 0.3920792551352511 1.0 ['ENST00000488080.5_1_2:175711684-175870060:-|nuORF'] 56548 12034 LDVLGRVW True H1975_Epitope_Rep1 956.5443511817999 956.54324993586 51.298 2 -1.3799561294776597 0.39211759236078825 1.0 ['nc|ENSG00000127527|Q9UBC2|EPS15L1', 'ENSG00000127527|ENST00000455140|EPS15L1', 'EPS15L1|p.F303Lfs*11|1|0.25|ENSG00000127527|chr19:16421360-16421360|G/-|frameshift_variant', 'nc|ENSG00000127527|Q9UBC2-4|EPS15L1', 'nc|ENSG00000127527|Q9UBC2-3|EPS15L1'] 61936 18713 LLLLWPWV True PC9_epitope_Rep4 1038.62662425378 1038.6255299358602 80.059 2 -1.3799772222937776 0.39211759236078825 1.0 ['ENST00000313250.9_1_14:24438236-24438314:+|nuORF'] 18675 11318 ELCTNNNLK True PC9_epitope_Rep3 1047.50189431647 1047.5007899358602 48.542 2 -1.3800287511828626 0.3921248390634686 1.0 ['ENSG00000139304|ENST00000644991|PTPRQ', 'nc|ENSG00000139304|Q9UMZ3|PTPRQ'] 55592 25367 LCLVICRKPKL True PC9_epitope_Rep5 1284.77740497508 1284.7763099358601 102.79 2 -1.380036380865784 0.3921274110101805 1.0 ['ENST00000451982.6_2_3:195408438-195423327:+|nuORF'] 62337 19019 LLRHRLKTHTT True NCI_RA007_Epitope_Rep2 1374.82080079842 1374.8191649037901 78.83 3 -1.3800945380365652 0.3921274110101805 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1', 'ENST00000549395.1_1_12:51450168-51451905:+|nuORF', 'ENST00000380135.7_1_12:51450138-51451833:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-5|LETMD1', 'ENST00000546814.1_1_12:51450084-51453211:+|nuORF', 'ENST00000552433.1_1_12:51449776-51450294:+|nuORF', 'ENST00000548516.5_1_12:51450138-51453211:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-4|LETMD1'] 99198 7773 SLASVRTL True PC9_epitope_Rep1 845.49706663621 845.49596993586 34.72 2 -1.380155505508267 0.39218234052952183 1.0 ['ENSG00000184898|ENST00000331426|RBM43', 'RBM43|p.P211S|1|0.06|ENSG00000184898|chr2:151251349-151251349|G/A|missense_variant'] 114587 10739 TSLELWMH True H1975_Epitope_Rep3 1015.4797023199101 1015.47860993586 46.386 2 -1.3802232267207106 0.3921828064654556 1.0 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 59740 14180 LGVLREGL True PC9_epitope_Rep2 855.5178020807899 855.51670993586 59.811 2 -1.3802621114563909 0.3921828064654556 1.0 ['ENSG00000146909|ENST00000275820|NOM1'] 85405 17239 QLEHQKRSAGR True PC9_epitope_Rep2 1308.7010795885599 1308.69998993586 71.571 2 -1.3802777387376688 0.3921828064654556 1.0 ['ENST00000471681.5_1_3:56606414-56647710:+|nuORF'] 11286 5563 DESKMKDYDLR True NCI_RA007_Epitope_Rep1 1398.6449297216998 1398.6438299358601 25.708 2 -1.3802989017711593 0.3921828064654556 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 112876 17285 TPPIIHRDL True PC9_epitope_Rep4 1060.60292868708 1060.60182993586 74.49 2 -1.3803146068507162 0.3921828064654556 1.0 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000165238|Q9Y3S1-3|WNK2', 'WNK2|p.S2101Rfs*23|1|0.26|ENSG00000165238|chr9:93300126-93300127|GT/-|frameshift_variant', 'ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2', 'WNK2|p.N1970Qfs*47|1|0.48|ENSG00000165238|chr9:93297934-93297935|-/C|frameshift_variant', 'nc|ENSG00000196632|Q9BYP7-3|WNK3', 'nc|ENSG00000196632|Q9BYP7-4|WNK3', 'nc|ENSG00000196632|Q9BYP7-2|WNK3', 'ENSG00000196632|ENST00000354646|WNK3'] 55147 10443 LANEKEEL True PC9_epitope_Rep5 944.4814761417199 944.48036993586 45.156 2 -1.3803520625855352 0.3921900516133646 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 40536 5010 HSPTCGLP True NCI_RA007_Epitope_Rep2 810.3694235949399 810.36832993586 24.111 2 -1.3803924827984533 0.3921926217295429 1.0 ['L1PB1_dup500|chr1:168563691-168564880:+|1.1704651704400395|0.014663390105224|6.32|469.0|54|1|anti-sense'] 122291 10018 VGRTENTI True NCI_RA007_Epitope_Rep3 888.46649478392 888.46538993586 46.497 2 -1.380425011615926 0.3921926217295429 1.0 ['ENSG00000142867|ENST00000648566|BCL10'] 77252 13604 NYINDLRNF True PC9_epitope_Rep4 1167.56727145435 1167.5661699358602 60.222 2 -1.3804307350870484 0.3921951917231844 1.0 ['ENST00000325222.8_1_7:148451159-148451216:+|nuORF'] 107495 7498 TAAIDRAFEGV True NCI_RA007_Epitope_Rep4 1148.58258716532 1148.5814899358602 35.486 2 -1.380474980940368 0.3921951917231844 1.0 ['ENSG00000188315|ENST00000343010|C3orf62'] 11289 6292 DESLKDFNM True H1975_Epitope_Rep2 1097.46992548185 1097.4688299358602 29.139 2 -1.380574449746023 0.39220243629168755 1.0 ['ENSG00000159459|ENST00000290650|UBR1', 'UBR1-TGM5|1|fusion', 'ENST00000569066.2_2_15:43318731-43322188:-|nuORF', 'UBR1-TGM5|2|fusion', 'UBR1-TGM5|3|fusion'] 58206 7902 LESRDKGL True PC9_epitope_Rep2 916.4977949121999 916.49668993586 35.761 2 -1.3807472192136396 0.39226927615347024 1.0 ['ENSG00000257743|ENST00000477922|MGAM2', 'ENST00000496337.1_1_7:141870985-141908039:+|nuORF'] 10169 8146 CCCPCCGG True PC9_epitope_Rep3 744.15217989724 744.15162496793 36.313 1 -1.380832561297449 0.39227651966626936 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 136501 258 YHKCWEPLKS True PC9_epitope_Rep1 1289.62267815549 1289.6210249037902 1.4138 3 -1.3810188935235055 0.3922982491686829 1.0 ['ENSG00000113924|ENST00000283871|HGD'] 48286 7253 KDLFEWRPP True PC9_epitope_Rep4 1186.61349337078 1186.6123899358602 35.209 2 -1.3810468748328801 0.3922982491686829 1.0 ['TCEAL1|p.G81W|1|0.13|ENSG00000172465|chrX:103630157-103630157|G/T|missense_variant'] 15996 8253 EDYYWMTGYP True H1975_Epitope_Rep2 1323.51179029383 1323.51068993586 36.699 2 -1.38108129290732 0.3922982491686829 1.0 ['ENSG00000178573|ENST00000326043|MAF', 'nc|ENSG00000178573|O75444|MAF'] 12761 12613 DLHADSLDW True PC9_epitope_Rep5 1070.46688870674 1070.4657899358601 53.518 2 -1.381190232130614 0.3923054919908467 1.0 ['ZNF365|p.G141W|1|0.25|ENSG00000138311|chr10:62376614-62376614|G/T|missense_variant'] 40306 22731 HRQVDHFFCEV True H1975_Epitope_Rep1 1415.64045347795 1415.63934993586 94.545 2 -1.3812080892902276 0.39231062592363064 1.0 ['OR2J3|p.A258Pfs*34|1|0.6|ENSG00000204701|chr6:29112661-29112661|G/-|frameshift_variant', 'nc|ENSG00000204701|O76001|OR2J3', 'ENSG00000204701|ENST00000641151|OR2J3'] 74906 9269 NLRLHEADNDP True NCI_RA007_Epitope_Rep1 1292.61092717148 1292.60982993586 40.052 2 -1.381292553691621 0.39231062592363064 1.0 ['CDH8|p.V727L|1|0.86|ENSG00000150394|chr16:61653829-61653829|C/A|missense_variant'] 60937 24100 LKYLNKIKPP True NCI_RA007_Epitope_Rep4 1212.7594293284799 1212.75778490379 104.48 3 -1.3813115513978185 0.39231062592363064 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 91381 12885 RMTVGNFSVP True PC9_epitope_Rep1 1106.5542642424998 1106.55316993586 54.435 2 -1.3813305039508077 0.39231062592363064 1.0 ['ENSG00000159871|ENST00000377950|LYPD5', 'nc|ENSG00000159871|Q6UWN5-2|LYPD5', 'ENST00000595666.1_1_19:44301745-44302778:-|nuORF'] 100240 11237 SLLPQKQEV True H1975_Epitope_Rep3 1040.5866099165999 1040.58550993586 48.326 2 -1.3814676125376812 0.3923251102371589 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611', 'nc|ENSG00000189190|Q6ZNG1|ZNF600', 'ENSG00000189190|ENST00000692063|ZNF600', 'ENSG00000198482|ENST00000359798|ZNF808', 'nc|ENSG00000198482|Q8N4W9-2|ZNF808'] 86337 20280 QQITGHGG True H1975_Epitope_Rep3 796.38276515996 796.38166993586 84.811 2 -1.3814701895739159 0.3923251102371589 1.0 ['nc|ENSG00000184752|Q9UI09-2|NDUFA12', 'ENSG00000184752|ENST00000327772|NDUFA12'] 30515 11403 GAHRGLMP True H1975_Epitope_Rep3 837.42794153057 837.42739496793 48.978 1 -1.3815806126976191 0.39234426952366197 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19', 'nc|ENSG00000176601|Q56UN5-7|MAP3K19', 'nc|ENSG00000176601|Q56UN5-4|MAP3K19', 'nc|ENSG00000176601|Q56UN5-5|MAP3K19'] 60809 21923 LKKALAAAGY True H1975_Epitope_Rep2 1004.6018660579198 1004.60076993586 90.645 2 -1.3816239027862496 0.3923468354128681 1.0 ['ENSG00000168298|ENST00000304218|H1-4', 'ENSG00000187837|ENST00000343677|H1-2', 'ENSG00000124575|ENST00000244534|H1-3', 'ENSG00000187475|ENST00000338379|H1-6', 'H1-2|p.D72N|1|0.18|ENSG00000187837|chr6:26056215-26056215|C/T|missense_variant'] 66123 5695 LSPAAVPV True NCI_RA007_Epitope_Rep2 752.4432401582 752.44214993586 26.768 2 -1.3817288005314416 0.3923468354128681 1.0 ['ENSG00000177045|ENST00000317578|SIX5', 'ENST00000560168.1_1_19:46268761-46269535:-|nuORF'] 57262 7617 LEGACSEYL True H1975_Epitope_Rep2 983.42699804071 983.42590993586 34.252 2 -1.3818422070270167 0.3923779107181162 1.0 ['nc|ENSG00000159899|P20594-2|NPR2', 'ENSG00000159899|ENST00000342694|NPR2'] 80792 21200 PLSSEQLKF True PC9_epitope_Rep5 1047.5600608155898 1047.5589699358602 86.593 2 -1.3819687264508174 0.3924094375595806 1.0 ['ENST00000454652.6_1_3:183398148-183398247:+|nuORF'] 134545 24723 WVKSGLGS True PC9_epitope_Rep2 832.4443027873599 832.4437549679301 100.78 1 -1.3819817123955935 0.3924094375595806 1.0 ['ENSG00000143198|ENST00000367889|MGST3'] 54885 7787 LAGLEAHT True PC9_epitope_Rep5 810.4235673427801 810.42246993586 34.898 2 -1.3820598176698178 0.3924094375595806 1.0 ['ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-5|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'nc|ENSG00000160305|Q14689-3|DIP2A', 'nc|ENSG00000160305|Q14689-2|DIP2A', 'nc|ENSG00000160305|Q14689-4|DIP2A'] 101331 11697 SLYQCRHDFRY True NCI_RA007_Epitope_Rep2 1486.67756726266 1486.67646993586 50.094 2 -1.382060532001283 0.3924094375595806 1.0 ['ENST00000286298.4_1_5:149365201-149365333:+|nuORF'] 3583 11132 AGPGAVID True PC9_epitope_Rep2 698.35990445706 698.35935496793 48.143 1 -1.3821111089747684 0.3924094375595806 1.0 ['nc|ENSG00000183715|Q14982-4|OPCML'] 24664 12870 FASVIFGS True PC9_epitope_Rep1 826.4225047136199 826.42140993586 54.378 2 -1.3821240303101556 0.3924094375595806 1.0 ['chr6:53564420-53564798|117|11.38|0.0|11.9|-|1|TE_info:MIRb,MIRb_dup82997,MIR,SINE,donor,-,53564798,53564890|GCLC,None|1'] 127006 16697 VPWWVILL True PC9_epitope_Rep4 1024.6109741896398 1024.6098699358602 72.199 2 -1.3822460488816584 0.3924409598932393 1.0 ['nc|ENSG00000135424|Q13683-9|ITGA7', 'ENSG00000135424|ENST00000257879|ITGA7', 'nc|ENSG00000135424|Q13683-3|ITGA7', 'nc|ENSG00000135424|Q13683|ITGA7', 'nc|ENSG00000135424|Q13683-13|ITGA7', 'nc|ENSG00000135424|Q13683-10|ITGA7', 'ENST00000557555.1_3_12:56079014-56082669:-|nuORF'] 69234 5826 LVNGILPQ True NCI_RA007_Epitope_Rep2 852.5069030439199 852.50580993586 27.28 2 -1.382258631128846 0.3924409598932393 1.0 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-4|CCDC14', 'ENST00000495381.5_1_3:123633936-123674711:-|nuORF'] 18857 8317 ELEIKISENA True PC9_epitope_Rep4 1144.5975685231201 1144.5964699358601 39.45 2 -1.382304718294792 0.3924409598932393 1.0 ['nc|ENSG00000253159|O60330-2|PCDHGA12', 'ENSG00000253159|ENST00000252085|PCDHGA12'] 100093 9253 SLKTQWWHWW True NCI_RA007_Epitope_Rep5 1456.70403971068 1456.70294993586 42.241 2 -1.3823718096139173 0.3924409598932393 1.0 ['ENST00000318443.9_1_15:73976775-73994724:+|nuORF'] 88763 9796 RDGDRLWYENP True PC9_epitope_Rep6 1419.6531263366296 1419.6520299358601 48.132 2 -1.382399576986286 0.3924409598932393 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 118742 15993 VEDKVKSV True PC9_epitope_Rep3 902.5072969667399 902.50618993586 66.661 2 -1.3824445941848968 0.3924409598932393 1.0 ['nc|ENSG00000100330|Q13615-3|MTMR3', 'nc|ENSG00000100330|Q13615-2|MTMR3', 'ENSG00000100330|ENST00000401950|MTMR3'] 37059 10007 GVSGFGPE True PC9_epitope_Rep5 748.3391690124799 748.33806993586 43.469 2 -1.382554854068793 0.39247459161910664 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 129821 5858 VTLGCLATGYF True NCI_RA007_Epitope_Rep1 1143.5634319438698 1143.5623299358601 26.839 2 -1.3825851731374743 0.39247459161910664 1.0 ['nc|ENSG00000211891|P01854-1|IGHE', 'nc|ENSG00000211891|P01854-3|IGHE', 'nc|ENSG00000211891|P01854|IGHE'] 57474 4918 LEKEILYYRK True H1975_Epitope_Rep1 1353.7656369077297 1353.76399490379 23.992 3 -1.3826589940151943 0.39247459161910664 1.0 ['nc|ENSG00000102038|P28370-2|SMARCA1', 'nc|ENSG00000102038|P28370|SMARCA1', 'ENSG00000102038|ENST00000371121|SMARCA1'] 105439 16760 SVAPLSPVP True PC9_epitope_Rep4 865.49091862661 865.49037496793 72.433 1 -1.3827026285227857 0.392481830096509 1.0 ['ENST00000335142.5_1_14:56043911-56046785:-|nuORF', 'ENST00000554558.5_1_14:55966046-56046785:-|nuORF'] 36891 22868 GVQPTRRRQ True PC9_epitope_Rep3 1096.62137271588 1096.62077496793 93.229 1 -1.3827760685997457 0.392489068401425 1.0 ['ENST00000531072.1_1_11:64808545-64809015:+|nuORF'] 140071 18302 YVLYASAM True PC9_epitope_Rep6 916.4364405255999 916.43589496793 83.042 1 -1.3827910868691742 0.39249630653386075 1.0 ['nc|ENSG00000136699|Q9NXE4-3|SMPD4', 'nc|ENSG00000136699|Q9NXE4-6|SMPD4', 'ENSG00000136699|ENST00000680298|SMPD4', 'nc|ENSG00000136699|Q9NXE4-2|SMPD4', 'nc|ENSG00000136699|Q9NXE4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-4|SMPD4', 'nc|ENSG00000136699|Q9NXE4-9|SMPD4', 'nc|ENSG00000136699|Q9NXE4-10|SMPD4', 'nc|ENSG00000136699|Q9NXE4-7|SMPD4', 'nc|ENSG00000136699|Q9NXE4-8|SMPD4', 'ENST00000438378.2_1_2:132275414-132277996:+|nuORF', 'ENST00000482171.5_1_2:130910130-130912221:-|nuORF', 'nc|ENSG00000136699|Q9NXE4-5|SMPD4'] 92460 14008 RQWRRRRRPQQ True H1975_Epitope_Rep1 1621.92504013985 1621.92394993586 59.044 2 -1.3829954217663576 0.39259885861341787 1.0 ['ENST00000295206.6_1_2:119600812-119604160:-|nuORF'] 36664 15753 GVLRQHQLR True NCI_RA007_Epitope_Rep3 1105.64685918773 1105.64576993586 69.602 2 -1.3830519747418903 0.3926180093883289 1.0 ['ENST00000319836.7_1_10:45956824-45959774:-|nuORF'] 20351 19989 EPGPPKPGV True PC9_epitope_Rep5 876.4705175352 876.46942993586 81.941 2 -1.38317560814564 0.39263715970691604 1.0 ['ENSG00000125826|ENST00000356286|RBCK1', 'RBCK1|p.P178L|1|0.19|ENSG00000125826|chr20:419419-419419|C/T|missense_variant', 'nc|ENSG00000125826|Q9BYM8-4|RBCK1', 'ENST00000382181.2_2_20:389382-402830:+|nuORF', 'nc|ENSG00000125826|Q9BYM8-3|RBCK1'] 92666 22362 RRGGRARA True PC9_epitope_Rep2 898.5321637886598 898.53106993586 91.503 2 -1.383219748649837 0.3926375982844889 1.0 ['ENST00000323544.4_1_15:65134133-65140811:+|nuORF'] 106605 14771 SWGLGQPW True NCI_RA007_Epitope_Rep2 929.4395517600899 929.43900496793 62.129 1 -1.3832223459967226 0.3926375982844889 1.0 ['ENST00000594984.1_1_19:50385622-50386129:+|nuORF'] 121988 4871 VGQDPVLR True NCI_RA007_Epitope_Rep5 882.49231560894 882.49120993586 25.431 2 -1.3832443183331316 0.3926375982844889 1.0 ['ENSG00000106028|ENST00000265304|SSBP1', 'ENST00000489378.5_1_7:141438966-141445458:+|nuORF'] 118955 15076 VEEVGRLL True PC9_epitope_Rep3 913.5232813840498 913.52218993586 63.125 2 -1.3832797335937308 0.3926375982844889 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant', 'ENST00000430598.5_1_15:20613931-20667676:-|nuORF', 'nc|ENSG00000290376|Q9BVR0|HERC2P3', 'ENST00000428453.5_1_15:20588586-20667676:-|nuORF', 'ENST00000529624.5_3_15:28877823-28916776:+|nuORF', 'ENST00000562687.6_3_16:32769598-32772029:+|nuORF', 'ENST00000524476.5_1_15:28882105-28886289:+|nuORF', 'ENST00000529353.1_1_15:28878360-28886587:+|nuORF'] 118760 8261 VEDRRRTY True NCI_RA007_Epitope_Rep1 1093.5628547802498 1093.56174993586 36.132 2 -1.383300323250244 0.3926375982844889 1.0 ['nc|ENSG00000148498|Q8TEW0-5|PARD3', 'nc|ENSG00000148498|Q8TEW0-3|PARD3', 'nc|ENSG00000148498|Q8TEW0-7|PARD3', 'nc|ENSG00000148498|Q8TEW0-6|PARD3', 'nc|ENSG00000148498|Q8TEW0-4|PARD3', 'nc|ENSG00000148498|Q8TEW0-11|PARD3', 'ENSG00000148498|ENST00000374788|PARD3', 'nc|ENSG00000148498|Q8TEW0|PARD3'] 118515 16842 VDSVLVKL True NCI_RA007_Epitope_Rep5 871.5378688190299 871.53676993586 71.532 2 -1.3833192898789128 0.39264739168245116 1.0 ['nc|ENSG00000126107|Q5T447-2|HECTD3', 'ENSG00000126107|ENST00000372172|HECTD3'] 19432 13198 ELPMVTTIQVM True PC9_epitope_Rep4 1260.64578166884 1260.64414490379 58.666 3 -1.3833239621258389 0.39264739168245116 1.0 ['nc|ENSG00000068079|P80217-2|IFI35', 'ENST00000246911.6_1_17:41158964-41165399:+|nuORF'] 97526 19485 SGSGGGGK True PC9_epitope_Rep3 605.27690310909 605.27635496793 80.178 1 -1.3833470160630101 0.39264739168245116 1.0 ['ZNF703|p.G568Dfs*14|1|0.18|ENSG00000183779|chr8:37698603-37698603|G/-|frameshift_variant', 'ZNF703|p.G558Afs*24|1|0.13|ENSG00000183779|chr8:37698569-37698569|G/-|frameshift_variant', 'ENSG00000183779|ENST00000331569|ZNF703'] 78410 24019 PAWITALP True NCI_RA007_Epitope_Rep3 867.4854393233499 867.48434993586 104.04 2 -1.383375781014107 0.3926546268941199 1.0 ['UBQLNL|p.P381T|2|0.48|ENSG00000175518|chr11:5515301-5515301|G/T|missense_variant'] 13323 12878 DLYYVRFTEWL True H1975_Epitope_Rep3 1503.7398160827097 1503.73870993586 54.76 2 -1.3834319069451724 0.3926618619334088 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 125632 11592 VMEWFFVSLAR True NCI_RA007_Epitope_Rep2 1383.7009284761898 1383.6998299358602 49.68 2 -1.38346728866288 0.392669096800324 1.0 ['ENST00000532163.5_1_11:111945534-111946292:+|nuORF'] 124425 15475 VLELDLSDMPL True PC9_epitope_Rep3 1243.63699080695 1243.6358899358602 64.676 2 -1.3835339195061191 0.39267633149487174 1.0 ['ENSG00000249715|ENST00000624922|FER1L5', 'nc|ENSG00000249715|A0AVI2-4|FER1L5', 'nc|ENSG00000249715|A0AVI2-2|FER1L5'] 32253 19994 GFLRQLQVL True PC9_epitope_Rep3 1072.6393141958 1072.63820993586 82.152 2 -1.3836049487842326 0.3926865582752665 1.0 ['nc|ENSG00000293542|Q9UII6|DUSP13B', 'nc|ENSG00000293542|Q9UII6-4|DUSP13B', 'ENSG00000079393|ENST00000478873|DUSP13'] 61713 23442 LLIIDLLLCI True PC9_epitope_Rep2 1140.71920430928 1140.71755490379 95.641 3 -1.3836819536674496 0.3926865582752665 1.0 ['ENST00000323571.8_1_17:38437179-38437275:+|nuORF'] 55506 7154 LAVSEGFFRK True PC9_epitope_Rep4 1152.6291434349198 1152.6274949037902 34.797 3 -1.3836981555842551 0.3926865582752665 1.0 ['nc|ENSG00000204183|Q5U4N7|GDF5-AS1'] 83950 5893 QELDSWYVI True NCI_RA007_Epitope_Rep1 1151.54989005471 1151.5487899358602 26.973 2 -1.38372013666796 0.3926865582752665 1.0 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6', 'ENST00000514179.5_1_5:130834202-130867847:-|nuORF'] 59194 19441 LGFSSEQKV True PC9_epitope_Rep5 993.51311062317 993.51200993586 79.831 2 -1.3837512099542382 0.3926865582752665 1.0 ['MYH13|p.E347Q|2|0.07|ENSG00000006788|chr17:10350661-10350661|C/G|missense_variant'] 122111 6914 VGRGGESR True NCI_RA007_Epitope_Rep5 816.42021329784 816.41910993586 33.281 2 -1.3837975353451217 0.3926865582752665 1.0 ['ENST00000576768.5_1_17:77924559-77924604:-|nuORF'] 83502 8945 QDILNLYQEPD True NCI_RA007_Epitope_Rep1 1346.63541058382 1346.63430993586 38.795 2 -1.383827965689879 0.3926865582752665 1.0 ['ENSG00000113300|ENST00000261951|CNOT6'] 59649 22611 LGSPGRRI True PC9_epitope_Rep1 854.50863437942 854.50752993586 91.784 2 -1.383856083829336 0.3926865582752665 1.0 ['ENST00000569647.1_1_16:50059214-50060668:+|nuORF'] 133352 7937 WFEKQFVPFHP True H1975_Epitope_Rep2 1460.7241064489197 1460.72300993586 35.477 2 -1.3840287741292636 0.3926972179878049 1.0 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD', 'ENST00000469841.5_1_3:57131519-57204269:-|nuORF'] 74448 18330 NIYVEVED True PC9_epitope_Rep6 979.4498416602698 979.44874993586 83.148 2 -1.3840368628009392 0.3926972179878049 1.0 ['nc|ENSG00000027869|Q9NP31-3|SH2D2A', 'nc|ENSG00000027869|Q9NP31-4|SH2D2A', 'ENSG00000027869|ENST00000368199|SH2D2A', 'nc|ENSG00000027869|Q9NP31-2|SH2D2A'] 87171 7635 QSLDDAAKT True H1975_Epitope_Rep2 947.45598966987 947.45488993586 34.32 2 -1.3840555792674623 0.3926972179878049 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 27124 15034 FLQRKYMLTWF True PC9_epitope_Rep4 1531.8009768706295 1531.7998699358602 65.761 2 -1.3841832449976812 0.3926972179878049 1.0 ['ENSG00000163617|ENST00000295878|CCDC191', 'ENST00000527855.1_1_3:113697695-113720591:-|nuORF'] 95303 13174 SAETFRRAKYH True H1975_Epitope_Rep1 1364.69493157896 1364.69382993586 55.77 2 -1.384227227270722 0.3926972179878049 1.0 ['ENSG00000173214|ENST00000671876|MFSD4B'] 27372 22211 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 92.582 2 -1.3842533791219647 0.3926972179878049 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 82043 7845 PSVDPERVL True PC9_epitope_Rep2 1010.53965972418 1010.53856993586 35.546 2 -1.3842654943352688 0.3926972179878049 1.0 ['ENSG00000134452|ENST00000362091|FBH1', 'nc|ENSG00000134452|Q8NFZ0-2|FBH1', 'ENST00000494526.1_1_10:5948484-5951317:+|nuORF'] 86442 23995 QQREYKKKK True PC9_epitope_Rep3 1234.7146043943796 1234.71295490379 97.584 3 -1.384273651892142 0.3926972179878049 1.0 ['ENSG00000119953|ENST00000369603|SMNDC1'] 104103 17284 SRWAIRGR True NCI_RA007_Epitope_Rep3 1000.5678805910399 1000.56678993586 75.873 2 -1.3842835027994493 0.3926972179878049 1.0 ['nc|ENSG00000183250|P58512|LINC01547', 'ENST00000330551.3_1_21:46354729-46357558:-|nuORF', 'nc|ENSG00000183250|P58512-3|LINC01547'] 52230 4957 KNEKVGSHGTQ True H1975_Epitope_Rep3 1183.5945488313498 1183.59344993586 24.195 2 -1.3842837393784313 0.3926972179878049 1.0 ['ENSG00000085741|ENST00000322563|WNT11'] 35418 10267 GTDGVQGLQTL True H1975_Epitope_Rep1 1087.55095268387 1087.54984993586 44.436 2 -1.3842901754359507 0.3926972179878049 1.0 ['ENSG00000123268|ENST00000262053|ATF1', 'ENSG00000118260|ENST00000353267|CREB1', 'nc|ENSG00000118260|P16220-1|CREB1'] 64509 23561 LRAKGTMA True NCI_RA007_Epitope_Rep3 846.47455736982 846.47346993586 102.21 2 -1.3842978582757854 0.3926972179878049 1.0 ['ENSG00000130821|ENST00000253122|SLC6A8', 'ENST00000485324.1_1_X:152959908-152960666:+|nuORF', 'nc|ENSG00000130821|P48029-3|SLC6A8', 'ENST00000431994.5_1_16:32890029-32891910:-|nuORF', 'nc|ENSG00000130821|P48029-4|SLC6A8', 'chrX:153694889-153695054|273|31.54|0.79|5.32|+|0|SLC6A8,None|1', 'nc|ENSG00000130821|P48029-2|SLC6A8'] 30765 16530 GAPEIRMSKP True PC9_epitope_Rep6 1084.56991430664 1084.5688099358601 76.023 2 -1.3843349001975929 0.3926972179878049 1.0 ['nc|ENSG00000028277|P09086-5|POU2F2', 'ENSG00000028277|ENST00000692977|POU2F2', 'nc|ENSG00000028277|P09086-3|POU2F2', 'nc|ENSG00000028277|P09086-2|POU2F2', 'nc|ENSG00000028277|P09086|POU2F2', 'nc|ENSG00000028277|P09086-4|POU2F2', 'ENST00000530982.7_1_19:42603618-42636563:-|nuORF'] 86884 19045 QRRQQKIQG True NCI_RA007_Epitope_Rep1 1140.6475874637197 1140.64594490379 78.222 3 -1.3844294567059845 0.3927116827438371 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16', 'ENSG00000156256|ENST00000399976|USP16', 'nc|ENSG00000156256|Q9Y5T5-4|USP16'] 120956 23471 VGEMFPADHPP True PC9_epitope_Rep1 1195.5331944447498 1195.53208993586 95.067 2 -1.3844964814869947 0.3927116827438371 1.0 ['ENST00000237536.8_2_20:35414273-35414927:-|nuORF'] 41874 16849 IDVILGGG True H1975_Epitope_Rep3 742.4225047136199 742.4219549679301 70.361 1 -1.3845260674740003 0.3927142380793598 1.0 ['ENSG00000163286|ENST00000295453|ALPG', 'ENSG00000163283|ENST00000392027|ALPP', 'ENSG00000163295|ENST00000295463|ALPI'] 121463 21857 VGISSLVEKD True H1975_Epitope_Rep3 1045.56554011885 1045.56444993586 91.381 2 -1.3845804516086637 0.3927142380793598 1.0 ['nc|ENSG00000138468|Q9BQF6-2|SENP7', 'ENSG00000138468|ENST00000394095|SENP7', 'nc|ENSG00000138468|Q9BQF6-5|SENP7', 'SENP7|p.C683Ffs*13|1|0.29|ENSG00000138468|chr3:101343744-101343744|C/-|frameshift_variant', 'nc|ENSG00000138468|Q9BQF6-4|SENP7'] 66368 10154 LSQWMPWI True PC9_epitope_Rep2 1059.52117320907 1059.5200699358602 44.394 2 -1.3846262037296841 0.39271679329316217 1.0 ['ENSG00000242950|ENST00000603053|ERVW-1'] 20089 4859 ENHETVAYEFM True NCI_RA007_Epitope_Rep2 1368.5656167718396 1368.56450993586 23.525 2 -1.3846375029681945 0.39271679329316217 1.0 ['ENSG00000069329|ENST00000299138|VPS35', 'ENST00000568784.6_1_16:46694386-46722246:-|nuORF'] 59287 11251 LGGVPLVK True PC9_epitope_Rep2 781.50617476793 781.50506993586 48.602 2 -1.3847620019192277 0.3927240250074427 1.0 ['EIF3C|p.R305L|1|0.16|ENSG00000184110|chr16:28723301-28723301|G/T|missense_variant'] 30243 9106 GAAEVPREPPI True NCI_RA007_Epitope_Rep3 1134.6033226098998 1134.6022299358601 42.903 2 -1.384810423836145 0.3927431647137277 1.0 ['ENSG00000015676|ENST00000355451|NUDCD3', 'ENST00000480209.1_1_7:44524201-44524862:-|nuORF'] 54860 8852 LAGFRGVP True H1975_Epitope_Rep3 815.4653725851098 815.46426993586 39.055 2 -1.3848916661565867 0.3927742119866154 1.0 ['ENST00000379888.8_1_10:6131069-6139013:+|nuORF'] 119868 8106 VEVSVLGS True H1975_Epitope_Rep3 788.4279840168799 788.42688993586 36.156 2 -1.3849420858170085 0.3927933506394532 1.0 ['nc|ENSG00000116525|Q9BVG3-2|TRIM62', 'ENSG00000116525|ENST00000291416|TRIM62'] 130898 10961 VVHHRIHTG True PC9_epitope_Rep2 1054.57844527474 1054.57787496793 47.483 1 -1.3851100855539231 0.3928507638632548 1.0 ['ENSG00000256223|ENST00000248211|ZNF10'] 58054 10472 LERLKSSVK True NCI_RA007_Epitope_Rep3 1058.64479349906 1058.64368993586 48.255 2 -1.385143226789406 0.3928507638632548 1.0 ['ENSG00000105928|ENST00000645220|GSDME', 'nc|ENSG00000105928|O60443-3|GSDME', 'nc|ENSG00000105928|O60443-2|GSDME'] 82498 14258 PVERLYDIVT True H1975_Epitope_Rep1 1203.6499384491499 1203.6488499358602 60.027 2 -1.3852162374165933 0.3928507638632548 1.0 ['ENSG00000180902|ENST00000321264|D2HGDH'] 46846 13973 IVFKHFKRNK True H1975_Epitope_Rep1 1315.7877097649896 1315.78660993586 58.905 2 -1.3852524119342071 0.39285331555195696 1.0 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 9972 13262 AYSNDGEHWT True PC9_epitope_Rep4 1178.4628659554598 1178.46176993586 58.911 2 -1.385283802126802 0.39285331555195696 1.0 ['EDIL3|p.K429*|1|0.21|ENSG00000164176|chr5:83963209-83963213|TCTTT/-|frameshift_variant', 'nc|ENSG00000164176|O43854-2|EDIL3', 'ENSG00000164176|ENST00000296591|EDIL3'] 79580 8596 PGTRSFGPAP True PC9_epitope_Rep2 985.4981292653698 985.49702993586 38.426 2 -1.385309728902868 0.3928843589255096 1.0 ['ENSG00000130487|ENST00000648057|KLHDC7B'] 69150 12064 LVLQPQLL True PC9_epitope_Rep5 922.5851533646198 922.58404993586 51.399 2 -1.38547182607351 0.3929511222242067 1.0 ['ENST00000562532.2_1_20:30584341-30584887:+|nuORF'] 73472 10844 NEVPPQPDP True H1975_Epitope_Rep2 991.46107505031 991.46052496793 46.741 1 -1.3855591148460202 0.39295196142627536 1.0 ['ENSG00000167565|ENST00000322354|SERTAD3', 'SERTAD3|p.V132A|1|0.18|ENSG00000167565|chr19:40441686-40441686|A/G|missense_variant'] 82485 8490 PVEETVFYPSP True NCI_RA007_Epitope_Rep2 1263.60231955039 1263.6012299358601 37.667 2 -1.3855860185935136 0.39295196142627536 1.0 ['nc|ENSG00000175193|Q9H300-2|PARL', 'PARL|p.G375Rfs*5|1|0.17|ENSG00000175193|chr3:183829615-183829616|-/T|frameshift_variant', 'ENSG00000175193|ENST00000317096|PARL'] 135022 13271 YAHITHKAL True PC9_epitope_Rep1 1052.5767139392399 1052.57560993586 55.912 2 -1.3855916639977977 0.39295196142627536 1.0 ['ENSG00000198876|ENST00000361264|DCAF12'] 55859 12691 LDFHEQPV True PC9_epitope_Rep5 983.4712458111898 983.47014993586 53.821 2 -1.385598737580731 0.39295196142627536 1.0 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 41331 13319 IAKVCARI True PC9_epitope_Rep5 872.5265929426798 872.52548993586 56.244 2 -1.3856171123053675 0.39295196142627536 1.0 ['ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 53506 10886 KVLNSGNF True PC9_epitope_Rep1 877.46576650793 877.46466993586 46.757 2 -1.3856732618138392 0.39295196142627536 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1', 'nc|ENSG00000159082|O43426-5|SYNJ1'] 16158 4816 EEERESEFALR True H1975_Epitope_Rep3 1393.6473722498497 1393.6462699358601 23.651 2 -1.3856901744894987 0.39295196142627536 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'ENST00000510223.5_1_4:89394995-89425581:+|nuORF', 'ENST00000502913.1_1_4:89394186-89425581:+|nuORF'] 46436 19908 ITLLRELGQ True PC9_epitope_Rep2 1041.61824439805 1041.6171499358602 81.972 2 -1.3857486598669095 0.39295196142627536 1.0 ['nc|ENSG00000171105|P06213-2|INSR', 'ENSG00000171105|ENST00000302850|INSR'] 133264 3303 WEFFYGHFFR True NCI_RA007_Epitope_Rep2 1434.6509415086596 1434.6498499358602 17.513 2 -1.385780372425516 0.39295196142627536 1.0 ['ENSG00000179387|ENST00000323570|ELMOD2'] 120211 17640 VFLVSVPAAP True PC9_epitope_Rep2 998.5800679841798 998.57896993586 73.133 2 -1.3858685791716874 0.39295196142627536 1.0 ['ENST00000491138.1_1_3:194930341-194930590:-|nuORF'] 93548 24402 RSQRRPRLRQF True PC9_epitope_Rep3 1498.8705449554998 1498.86889490379 99.182 3 -1.3858951182455892 0.3929591885327873 1.0 ['ENSG00000186854|ENST00000409520|TRABD2A', 'nc|ENSG00000186854|Q86V40-2|TRABD2A'] 6057 9030 APMHDLLL True NCI_RA007_Epitope_Rep3 908.47897404392 908.47786993586 42.615 2 -1.3860182806907884 0.3929783206543091 1.0 ['ENSG00000100714|ENST00000652337|MTHFD1', 'ENST00000555252.5_1_14:64855058-64907131:+|nuORF'] 117811 16145 VAMVFQWFHST True PC9_epitope_Rep2 1351.6383282196298 1351.6372299358602 67.358 2 -1.3862182326175272 0.39305697754708446 1.0 ['nc|ENSG00000133958|Q9P2D8|UNC79', 'nc|ENSG00000133958|Q9P2D8-3|UNC79', 'ENSG00000133958|ENST00000695012|UNC79', 'nc|ENSG00000133958|Q9P2D8-2|UNC79'] 74878 10619 NLQRTGQVYY True H1975_Epitope_Rep3 1240.6200353031998 1240.61892993586 45.917 2 -1.3864634785364138 0.3931428571428571 1.0 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2', 'ENST00000517674.5_1_8:102644467-102676686:+|nuORF'] 23179 11640 EVPNEKCHL True PC9_epitope_Rep2 1067.5069796969099 1067.50588993586 50.099 2 -1.386474732205294 0.3931428571428571 1.0 ['ENSG00000197520|ENST00000445590|FAM177B'] 35986 19337 GVAYVRPLAL True PC9_epitope_Rep2 1057.6284151589298 1057.62730993586 79.753 2 -1.386575454475398 0.39314540129996906 1.0 ['ENST00000535678.1_1_2:223725777-223773458:+|nuORF', 'ENST00000392066.7_1_2:223725777-223773468:+|nuORF', 'ENST00000357430.7_1_2:223725777-223765478:+|nuORF'] 59586 24022 LGRWRRKRRW True PC9_epitope_Rep1 1468.8752364131196 1468.87412993586 97.209 2 -1.3865914030266866 0.39314540129996906 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2'] 80316 22408 PLFFLKVP True PC9_epitope_Rep1 959.5844250886298 959.58332993586 91.012 2 -1.3866093732408638 0.3931479453359364 1.0 ['nc|ENSG00000083223|Q5VYS8-2|TUT7'] 105569 19812 SVDSSWISW True PC9_epitope_Rep5 1065.4767251144501 1065.47562993586 81.254 2 -1.3866290497159082 0.3931479453359364 1.0 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF'] 72967 3673 NCPSFALH True PC9_epitope_Rep1 887.3959726959499 887.39486993586 19.047 2 -1.3866824799710171 0.3931670733884888 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 119426 5019 VEPHSPSPSSK True H1975_Epitope_Rep3 1150.56185172074 1150.56074993586 24.427 2 -1.3867880159939383 0.39322191272052 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 115934 12035 TVPMYRLIP True PC9_epitope_Rep2 1088.6052371862 1088.60412993586 51.609 2 -1.3868214988906236 0.3932291356672658 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2'] 106133 17221 SVNVRLSP True PC9_epitope_Rep5 870.49231560894 870.49120993586 71.261 2 -1.3869725145349139 0.39326992893787716 1.0 ['nc|ENSG00000138434|P28290-2|ITPRID2', 'nc|ENSG00000138434|P28290-3|ITPRID2', 'ENSG00000138434|ENST00000431877|ITPRID2', 'ENST00000440623.5_1_2:182756982-182781157:+|nuORF'] 22895 5834 EVEYYYQRALE True H1975_Epitope_Rep3 1461.6776097489699 1461.6765099358602 27.459 2 -1.3869852578131925 0.39326992893787716 1.0 ['nc|ENSG00000126214|Q07866-8|KLC1', 'nc|ENSG00000126214|Q07866-2|KLC1', 'nc|ENSG00000126214|Q07866-3|KLC1', 'nc|ENSG00000126214|Q07866|KLC1', 'nc|ENSG00000126214|Q07866-7|KLC1', 'nc|ENSG00000126214|Q07866-5|KLC1', 'nc|ENSG00000126214|Q07866-10|KLC1', 'nc|ENSG00000126214|Q07866-6|KLC1', 'nc|ENSG00000126214|Q07866-4|KLC1', 'ENSG00000126214|ENST00000334553|KLC1'] 79412 20767 PGMVAHAS True H1975_Epitope_Rep2 768.35885891124 768.35776993586 85.992 2 -1.3870230883021388 0.39326992893787716 1.0 ['ENST00000295628.3_1_3:120045250-120045442:-|nuORF'] 15439 14288 EANMDIVYKDM True H1975_Epitope_Rep1 1327.5788243078298 1327.5777299358601 60.145 2 -1.3870452735986196 0.39326992893787716 1.0 ['ENSG00000050393|ENST00000379170|MCUR1'] 42738 14003 IFDRELHRQTG True NCI_RA007_Epitope_Rep4 1370.7054962626598 1370.70438993586 61.135 2 -1.3871426276122591 0.3933128600676094 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2', 'chr1:183207943-183215453|223|30.46|0.17|7.49|+|2|None,LAMC2|1'] 64166 16010 LQFYFFCTF True PC9_epitope_Rep4 1214.5470536037399 1214.54539490379 69.516 3 -1.387261149333714 0.3934034018544749 1.0 ['ENSG00000167825|ENST00000301532|OR5I1'] 28146 21955 FRKKKREQ True PC9_epitope_Rep6 1118.6672602791398 1118.6661699358601 97.366 2 -1.3874085468662443 0.39343442759540076 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 11570 4301 DGRWVRLHR True NCI_RA007_Epitope_Rep1 1193.6530071973298 1193.65135490379 20.841 3 -1.387488061208739 0.39345042600790137 1.0 ['CHST8|p.S148R|1|0.24|ENSG00000124302|chr19:33772232-33772232|C/A|missense_variant'] 13965 8549 DRNAGQLERPQ True H1975_Epitope_Rep3 1282.6378106256598 1282.6367099358602 37.873 2 -1.3875172159212226 0.39345042600790137 1.0 ['ENST00000481817.5_1_7:148984700-148990670:+|nuORF', 'ENST00000476295.5_1_7:148984726-148990880:+|nuORF'] 16518 9212 EEPEPKPDRLL True H1975_Epitope_Rep3 1321.6877805098497 1321.6866899358602 40.426 2 -1.3875570717122352 0.39345042600790137 1.0 ['ENSG00000117479|ENST00000236137|SLC19A2'] 65050 5750 LSDKTLYKYFL True NCI_RA007_Epitope_Rep2 1389.75440351769 1389.75274490379 26.983 3 -1.387648961628415 0.39345042600790137 1.0 ['ENSG00000152822|ENST00000282753|GRM1', 'nc|ENSG00000152822|Q13255-2|GRM1', 'nc|ENSG00000152822|Q13255-3|GRM1', 'ENST00000507005.1_1_6:146350692-146480734:+|nuORF', 'GRM1|p.W372Cfs*29|1|0.23|ENSG00000152822|chr6:146304775-146304775|G/-|frameshift_variant', 'GRM1|p.T794Pfs*6|1|0.34|ENSG00000152822|chr6:146399417-146399417|C/-|frameshift_variant'] 45617 10066 ISHCAGGR True NCI_RA007_Epitope_Rep1 799.3759059577098 799.37480993586 43.164 2 -1.3877879209833452 0.39345042600790137 1.0 ['ENST00000300584.7_1_15:78290174-78290387:-|nuORF'] 104383 11586 SSGERWIRY True PC9_epitope_Rep5 1152.5676058075198 1152.56650993586 49.562 2 -1.387842336053157 0.39345042600790137 1.0 ['nc|ENSG00000125875|Q96BZ9-2|TBC1D20'] 120476 15950 VFVLPFPV True NCI_RA007_Epitope_Rep5 916.5422259234799 916.54112993586 68.077 2 -1.3878446479492903 0.39345042600790137 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 64392 7502 LQQQVQEQQLL True H1975_Epitope_Rep3 1353.7252286477299 1353.7241299358602 33.838 2 -1.3879048528811524 0.39345042600790137 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 121185 14974 VGGLEMLLPRL True PC9_epitope_Rep3 1196.6951148197597 1196.69400993586 62.728 2 -1.3880077320240753 0.39345042600790137 1.0 ['ENST00000375615.7_1_11:111411384-111414687:+|nuORF', 'ENST00000375614.6_1_11:111411285-111414687:+|nuORF'] 59018 6556 LGAPERPEHLL True NCI_RA007_Epitope_Rep4 1230.67207087606 1230.67096993586 31.83 2 -1.3880114702125341 0.39345042600790137 1.0 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'ENST00000538884.1_1_17:38334521-38337576:+|nuORF'] 22908 7449 EVFHQLHDPHR True NCI_RA007_Epitope_Rep2 1413.69018055169 1413.68908993586 33.6 2 -1.3880623648566945 0.39345042600790137 1.0 ['ENST00000605862.4_1_7:128214806-128231910:+|nuORF', 'ENST00000479267.2_3_7:128218036-128231910:+|nuORF'] 119340 23562 VEMKVKIIRTI True PC9_epitope_Rep1 1328.8213779620396 1328.82028993586 95.421 2 -1.3880835155696436 0.39345042600790137 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant'] 32684 21697 GHPVPFAT True PC9_epitope_Rep6 824.41808803952 824.41698993586 96.345 2 -1.3881426640923318 0.39345042600790137 1.0 ['ENSG00000163638|ENST00000498707|ADAMTS9', 'nc|ENSG00000163638|Q9P2N4-4|ADAMTS9'] 91212 23793 RLRLRKERVSD True PC9_epitope_Rep1 1426.84807817542 1426.84642490379 96.318 3 -1.388149282602116 0.39345042600790137 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 15223 12061 EAFTDLKHA True PC9_epitope_Rep6 1030.5083595958997 1030.5072699358602 57.705 2 -1.3881746838760842 0.39345042600790137 1.0 ['nc|ENSG00000185480|Q9NWS1-2|PARPBP', 'ENSG00000185480|ENST00000327680|PARPBP', 'nc|ENSG00000185480|Q9NWS1-7|PARPBP', 'nc|ENSG00000185480|Q9NWS1-6|PARPBP'] 55717 14211 LDDLNRTKKY True H1975_Epitope_Rep3 1264.67755017932 1264.67644993586 60.0 2 -1.388249167301488 0.39345042600790137 1.0 ['ENSG00000163820|ENST00000296137|FYCO1', 'nc|ENSG00000163820|Q9BQS8-4|FYCO1'] 11368 10553 DFFSRLVEIEP True NCI_RA007_Epitope_Rep1 1350.68196685342 1350.68086993586 45.033 2 -1.388280403074241 0.39345042600790137 1.0 ['ENSG00000155961|ENST00000369454|RAB39B'] 71203 18997 MFLTRALEKIL True NCI_RA007_Epitope_Rep3 1333.7791787968897 1333.7780899358602 83.006 2 -1.3883293407326147 0.39345042600790137 1.0 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ARFGEF1|p.G169Rfs*74|1|0.21|ENSG00000066777|chr8:67296565-67296566|-/T|frameshift_variant'] 71364 20004 MIALLLWRPRA True NCI_RA007_Epitope_Rep5 1338.79583192054 1338.79417490379 83.863 3 -1.3883328288871652 0.39345042600790137 1.0 ['ENSG00000112494|ENST00000230256|UNC93A', 'nc|ENSG00000112494|Q86WB7-2|UNC93A'] 52741 19945 KQLRQQRF True NCI_RA007_Epitope_Rep4 1102.63596015086 1102.63486993586 86.25 2 -1.388342290294959 0.39345042600790137 1.0 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000445090.5_1_2:233028172-233195406:+|nuORF', 'nc|ENSG00000144535|Q8IYB7-2|DIS3L2', 'ENST00000498319.2_1_2:233127988-233172255:+|nuORF', 'ENST00000433430.5_1_2:233125383-233196385:+|nuORF'] 108766 25695 TEPKLGKQV True PC9_epitope_Rep1 998.5760452328999 998.57494993586 103.87 2 -1.3883625047714718 0.39345042600790137 1.0 ['ENST00000296328.8_1_3:196083300-196083480:-|nuORF'] 110722 11597 TKEQILEEFSK True H1975_Epitope_Rep1 1350.7030962208198 1350.7019899358602 49.597 2 -1.3883705471020256 0.39345042600790137 1.0 ['nc|ENSG00000271793|O60506-4|SYNCRIP', 'nc|ENSG00000271793|O60506-3|SYNCRIP', 'nc|ENSG00000271793|O60506-2|SYNCRIP', 'ENSG00000135316|ENST00000369622|SYNCRIP', 'nc|ENSG00000271793|O60506-5|SYNCRIP'] 56073 12032 LDLEKLPEF True NCI_RA007_Epitope_Rep2 1102.5910265906998 1102.58992993586 51.394 2 -1.3884123545096114 0.3934767605131012 1.0 ['ENSG00000103356|ENST00000449606|EARS2', 'nc|ENSG00000103356|Q5JPH6-2|EARS2', 'ENST00000564987.1_1_16:23541198-23555881:-|nuORF'] 653 13270 AATRLDSR True H1975_Epitope_Rep3 888.4777281739599 888.47662993586 56.302 2 -1.3884141920397177 0.3934767605131012 1.0 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 17998 18506 EIHPLRRWR True PC9_epitope_Rep1 1261.71560745389 1261.7139749037901 75.973 3 -1.3884805216313152 0.3934958769142898 1.0 ['CDH12|p.V63Cfs*43|1|0.46|ENSG00000154162|chr5:22078490-22078491|-/A|frameshift_variant'] 95096 22636 RYSYTLQSTT True H1975_Epitope_Rep2 1218.5880664685797 1218.58642490379 93.509 3 -1.3885283096328276 0.3935149928605426 1.0 ['ENST00000578026.5_1_17:57335188-57344505:+|nuORF'] 73048 19854 NDKMEECVKL True PC9_epitope_Rep4 1207.5576949404299 1207.55658993586 84.499 2 -1.3885985010950237 0.3935676550378373 1.0 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 19000 11686 ELGERGSI True PC9_epitope_Rep5 859.4399456829099 859.43884993586 49.947 2 -1.3886867134194971 0.3935676550378373 1.0 ['ENSG00000189091|ENST00000302516|SF3B3'] 30032 14686 FYHSDWCEMLS True NCI_RA007_Epitope_Rep5 1416.5478585327198 1416.54676993586 63.159 2 -1.3887010586436626 0.3935676550378373 1.0 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|142|2|anti-sense'] 135540 7230 YEEFWIKYAKY True H1975_Epitope_Rep1 1538.74456710998 1538.74346993586 32.82 2 -1.3887233723021526 0.3935676550378373 1.0 ['ENSG00000185246|ENST00000355765|PRPF39', 'ENST00000424478.5_1_14:45565874-45584113:+|nuORF'] 65632 6544 LSGQERTV True PC9_epitope_Rep3 888.4664947839199 888.46538993586 30.198 2 -1.3887830258473206 0.3935867689928015 1.0 ['ENSG00000152104|ENST00000366956|PTPN14'] 82927 17141 PWKSGLDCI True PC9_epitope_Rep6 1017.4953523840499 1017.49424993586 78.518 2 -1.3887943482740925 0.39359398424672204 1.0 ['ENST00000290649.9_2_16:56396705-56396813:-|nuORF'] 14687 8688 DVNVYLGLTS True H1975_Epitope_Rep1 1079.5498900547097 1079.5487899358602 38.349 2 -1.3889277649541778 0.39363474122546105 1.0 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14', 'ENSG00000121101|ENST00000349033|TEX14', 'TEX14|p.V574Ffs*10|1|0.41|ENSG00000121101|chr17:58599643-58599643|C/-|frameshift_variant'] 25739 11381 FFLMDLVL True NCI_RA007_Epitope_Rep5 996.5354262908799 996.53432993586 50.428 2 -1.3889642675055434 0.39363474122546105 1.0 ['ENSG00000099822|ENST00000251287|HCN2', 'HCN2|p.R345Pfs*12|1|0.19|ENSG00000099822|chr19:603945-603945|G/-|frameshift_variant', 'HCN2|p.Y504Mfs*54|1|0.23|ENSG00000099822|chr19:610331-610331|T/-|frameshift_variant'] 118723 9290 VEDDDDDD True NCI_RA007_Epitope_Rep1 936.28322982764 936.28212993586 40.131 2 -1.3889704723504432 0.39363474122546105 1.0 ['nc|ENSG00000132950|Q9UJ78-1|ZMYM5', 'nc|ENSG00000132950|Q9UJ78-2|ZMYM5', 'nc|ENSG00000132950|Q9UJ78-3|ZMYM5', 'ENST00000535942.5_1_13:20425681-20437631:-|nuORF', 'ENSG00000132950|ENST00000337963|ZMYM5'] 131485 637 VVVAKPKG True NCI_RA007_Epitope_Rep1 796.5170738047999 796.51596993586 3.3888 2 -1.3890017663345429 0.39363474122546105 1.0 ['PDILT|p.R364Lfs*5|1|0.18|ENSG00000169340|chr16:20369515-20369517|TGC/A|frameshift_variant', 'ENSG00000169340|ENST00000302451|PDILT'] 74905 11920 NLRKRVLEME True PC9_epitope_Rep5 1286.71289014222 1286.71123490379 50.847 3 -1.3890106658460517 0.39364195547941133 1.0 ['nc|ENSG00000118407|Q7Z7B0-2|FILIP1', 'ENSG00000118407|ENST00000237172|FILIP1', 'nc|ENSG00000118407|Q7Z7B0-3|FILIP1', 'FILIP1|p.G1085Vfs*9|1|0.23|ENSG00000118407|chr6:75312572-75312578|CTGACTC/-|frameshift_variant'] 34422 10690 GPWRAGGT True PC9_epitope_Rep6 800.3929359208398 800.39182993586 51.933 2 -1.3891399657189232 0.39367296435539906 1.0 ['ENST00000252136.11_2_22:20104501-20104702:-|nuORF'] 19642 13409 ELRRRLESNKP True NCI_RA007_Epitope_Rep1 1396.7898945929596 1396.7887899358602 56.162 2 -1.389177497903969 0.39368017798293936 1.0 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1', 'CLIP1|p.E1185Gfs*24|1|0.23|ENSG00000130779|chr12:122309804-122309805|-/T|frameshift_variant'] 57228 23359 LEFDLLYP True H1975_Epitope_Rep1 1008.5167990212799 1008.51570993586 97.092 2 -1.3892320920532015 0.39368523739843203 1.0 ['nc|ENSG00000125999|Q8TDL5-2|BPIFB1', 'ENST00000464032.1_1_20:31886647-31890426:+|nuORF', 'ENSG00000125999|ENST00000253354|BPIFB1'] 95943 4576 SDYSFSVIAMS True NCI_RA007_Epitope_Rep2 1205.52744035797 1205.52634993586 22.426 2 -1.3892637753646186 0.39368523739843203 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 118008 8112 VASLWPGQGH True PC9_epitope_Rep2 1050.52467836638 1050.5235899358602 36.561 2 -1.3893033616441377 0.39368523739843203 1.0 ['ENST00000409429.5_1_2:74783165-74783511:+|nuORF'] 12279 10022 DISKQLHAYEV True PC9_epitope_Rep4 1301.66156576201 1301.6604699358602 46.212 2 -1.3893055895107604 0.39368523739843203 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4'] 101291 9131 SLWWVPESAR True NCI_RA007_Epitope_Rep2 1229.61930702721 1229.61820993586 40.124 2 -1.3893680155079091 0.39369245045087914 1.0 ['SLC22A7|p.E326Nfs*10|1|0.42|ENSG00000137204|chr6:43301602-43301602|C/-|frameshift_variant', 'nc|ENSG00000137204|Q9Y694-3|SLC22A7', 'nc|ENSG00000137204|Q9Y694-2|SLC22A7', 'ENSG00000137204|ENST00000372585|SLC22A7'] 38272 7291 HFFVEWFEYRK True NCI_RA007_Epitope_Rep3 1586.76703389006 1586.7653849037902 35.789 3 -1.3895321020397127 0.39371877230549607 1.0 ['ENSG00000188312|ENST00000375587|CENPP'] 85210 23352 QKHKKKEAAL True H1975_Epitope_Rep3 1179.7087907379498 1179.70714490379 97.479 3 -1.3895359063414967 0.39371877230549607 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 40165 14323 HREWGSHNCYH True PC9_epitope_Rep1 1424.5792502037202 1424.5781499358602 59.917 2 -1.3896199092950672 0.39374040897898005 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1', 'CD163L1|p.D142Efs*9|1|0.09|ENSG00000177675|chr12:7433393-7433394|-/T|frameshift_variant'] 62063 9802 LLMMEDTLW True PC9_epitope_Rep1 1150.54025397114 1150.53914993586 42.565 2 -1.3896659898382602 0.39374040897898005 1.0 ['nc|ENSG00000104728|O15013-7|ARHGEF10', 'nc|ENSG00000104728|O15013-4|ARHGEF10', 'ENSG00000104728|ENST00000349830|ARHGEF10', 'nc|ENSG00000104728|O15013-6|ARHGEF10', 'nc|ENSG00000104728|O15013|ARHGEF10'] 122499 22457 VGSRRGRR True PC9_epitope_Rep3 942.5583785364998 942.55783496793 91.658 1 -1.3896937507055631 0.39374040897898005 1.0 ['ENST00000523094.5_2_5:157285974-157286100:-|nuORF'] 111860 11336 TLRKPKRVPSI True H1975_Epitope_Rep2 1293.8244891965298 1293.82285490379 48.654 3 -1.3897019654846532 0.3937476208602969 1.0 ['ENSG00000270765|ENST00000604641|GAS2L2'] 66143 15030 LSPDLSHTTL True PC9_epitope_Rep3 1082.56078909158 1082.5596899358602 62.94 2 -1.38981608871244 0.39377178270230406 1.0 ['ENSG00000198734|ENST00000367797|F5'] 15997 8353 EDYYWMTGYP True H1975_Epitope_Rep2 1323.51179029383 1323.51068993586 37.082 2 -1.3898891836824283 0.39377178270230406 1.0 ['ENSG00000178573|ENST00000326043|MAF', 'nc|ENSG00000178573|O75444|MAF'] 78442 14468 PCGPGGGGR True H1975_Epitope_Rep3 756.33370679256 756.33315496793 61.01 1 -1.389927301185412 0.39377178270230406 1.0 ['ENSG00000047188|ENST00000161863|YTHDC2'] 140510 17150 YYIRSKVK True H1975_Epitope_Rep3 1055.61276509479 1055.6121749679298 71.6 1 -1.3899286016587162 0.39377178270230406 1.0 ['ENST00000483257.1_1_X:70326085-70326406:-|nuORF', 'ENSG00000204165|ENST00000374251|CXorf65'] 30857 7451 GAQVQQVVN True PC9_epitope_Rep5 941.4930438849299 941.49194993586 33.614 2 -1.3899522506529656 0.39377178270230406 1.0 ['nc|ENSG00000183020|O94973-2|AP2A2', 'ENSG00000183020|ENST00000448903|AP2A2', 'ENST00000531497.1_1_11:1007968-1008136:+|nuORF'] 79246 19135 PGGKKMVL True PC9_epitope_Rep6 828.4891448047998 828.48804993586 86.254 2 -1.390219021498914 0.3937934151679513 1.0 ['ENST00000482384.1_1_1:109756587-109756749:+|nuORF'] 3527 16811 AGLVISPLW True PC9_epitope_Rep1 954.5538532363399 954.55274993586 69.489 2 -1.390239230628723 0.3937934151679513 1.0 ['ENSG00000151665|ENST00000281382|PIGF'] 57193 9635 LEESTVTQHAV True H1975_Epitope_Rep3 1212.5986311522802 1212.5975299358602 42.077 2 -1.3902602897458327 0.3937934151679513 1.0 ['ENST00000469899.2_1_12:66431104-66431491:+|nuORF'] 10144 3988 CCCCCCSC True PC9_epitope_Rep1 826.10688658094 826.10578993586 20.248 2 -1.3903326134683185 0.3938078359540405 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 93500 24734 RSKSKRLF True PC9_epitope_Rep4 1020.6192474575599 1020.61867496793 103.64 1 -1.3903469149835666 0.3938078359540405 1.0 ['ENSG00000166035|ENST00000299022|LIPC'] 113896 24761 TRHRKFKE True NCI_RA007_Epitope_Rep5 1100.6203100867199 1100.61920993586 102.73 2 -1.390373934329502 0.3938150460898008 1.0 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 48706 16005 KEMMKETFKYF True NCI_RA007_Epitope_Rep1 1480.7094445545602 1480.70834993586 66.359 2 -1.3903781464761054 0.39381541389153185 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 116474 15139 TYASLHGRIY True H1975_Epitope_Rep2 1179.60365696307 1179.60254993586 63.387 2 -1.390426898973978 0.39381541389153185 1.0 ['ENSG00000050405|ENST00000341247|LIMA1', 'nc|ENSG00000050405|Q9UHB6-4|LIMA1', 'nc|ENSG00000050405|Q9UHB6-3|LIMA1', 'nc|ENSG00000050405|Q9UHB6-2|LIMA1', 'nc|ENSG00000050405|Q9UHB6-5|LIMA1'] 60068 23384 LHSKLISGG True PC9_epitope_Rep6 910.52361573722 910.52250993586 103.05 2 -1.390430468438454 0.39381541389153185 1.0 ['ENSG00000163811|ENST00000407426|WDR43'] 8469 7749 ATTAQHGKRH True PC9_epitope_Rep5 1105.5740881702898 1105.57298993586 34.748 2 -1.3904700609685963 0.39381541389153185 1.0 ['ENST00000302079.10_2_18:10871411-10979568:-|nuORF'] 117387 10650 VADATAIKQHV True H1975_Epitope_Rep1 1151.62987171091 1151.6287699358602 45.922 2 -1.3904852093225049 0.39381541389153185 1.0 ['nc|ENSG00000172421|Q8N7B9-2|EFCAB3', 'ENSG00000172421|ENST00000305286|EFCAB3'] 42872 14133 IFRLRPWDA True PC9_epitope_Rep5 1172.6454622054 1172.6438249037901 59.374 3 -1.3905348689975188 0.39382262342265195 1.0 ['ENSG00000186912|ENST00000374519|P2RY4'] 129340 14011 VTDTLRVP True PC9_epitope_Rep1 899.5076313199099 899.50652993586 58.732 2 -1.3905705703205355 0.3938323581180724 1.0 ['ENSG00000175224|ENST00000683050|ATG13', 'ENST00000528984.5_1_11:46678586-46685654:+|nuORF'] 12734 10793 DLGKKLSVPQ True H1975_Epitope_Rep3 1083.6288090817498 1083.6277099358601 46.596 2 -1.3905833480713654 0.3938323581180724 1.0 ['nc|ENSG00000164591|Q8TDC0-3|MYOZ3', 'nc|ENSG00000164591|Q8TDC0-2|MYOZ3', 'ENSG00000164591|ENST00000517768|MYOZ3'] 121237 9011 VGGQRGSQ True H1975_Epitope_Rep2 787.3936641968298 787.39256993586 39.612 2 -1.3906733657858714 0.3938323581180724 1.0 ['nc|ENSG00000080031|Q9HD43-2|PTPRH', 'ENSG00000080031|ENST00000376350|PTPRH', 'ENST00000588559.5_1_19:55705613-55720813:-|nuORF', 'nc|ENSG00000080031|Q9HD43-3|PTPRH'] 14761 7047 DVWVMMFVM True H1975_Epitope_Rep3 1156.5119310483199 1156.51082993586 32.072 2 -1.3906968992594495 0.39383956710471546 1.0 ['ENSG00000273079|ENST00000609686|GRIN2B'] 121581 17333 VGKWPFPQH True PC9_epitope_Rep6 1094.5661492555398 1094.56504993586 79.284 2 -1.3907287518399782 0.39384677591989153 1.0 ['ENST00000319080.7_12:122630330-122630822:+|nuORF'] 128290 8063 VSARRDAYRR True H1975_Epitope_Rep1 1248.6799502211597 1248.6788499358602 35.957 2 -1.3908575009974884 0.39385398456360676 1.0 ['ENSG00000087510|ENST00000201031|TFAP2C'] 131484 511 VVVAKPKG True NCI_RA007_Epitope_Rep1 796.5170738047999 796.51596993586 2.7169 2 -1.3908806348103884 0.393868401336679 1.0 ['PDILT|p.R364Lfs*5|1|0.18|ENSG00000169340|chr16:20369515-20369517|TGC/A|frameshift_variant', 'ENSG00000169340|ENST00000302451|PDILT'] 128496 8817 VSFNGGKSVI True NCI_RA007_Epitope_Rep5 1006.5447451046199 1006.54364993586 40.58 2 -1.3909005416997577 0.393868401336679 1.0 ['ANTXR2|p.A359Cfs*13|1|0.21|ENSG00000163297|chr4:79984831-79984832|-/G|frameshift_variant', 'ENSG00000163297|ENST00000403729|ANTXR2', 'nc|ENSG00000163297|P58335|ANTXR2'] 120990 19591 VGETTSRTI True PC9_epitope_Rep4 962.50327421546 962.50216993586 83.48 2 -1.3909577697018394 0.39387165432040044 1.0 ['ENSG00000142609|ENST00000682832|CFAP74', 'ENST00000270720.11_1_1:1887019-1905630:-|nuORF', 'nc|ENSG00000142609|Q9C0B2-2|CFAP74', 'nc|ENSG00000142609|Q9C0B2|CFAP74'] 118318 3233 VDEGEECSD True PC9_epitope_Rep1 981.32332081781 981.3227749679301 17.317 1 -1.3909923019486357 0.39387165432040044 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'GIGYF2|p.S337F|1|0.34|ENSG00000204120|chr2:232791087-232791087|C/T|missense_variant'] 15998 13499 EEAAPEGP True NCI_RA007_Epitope_Rep1 798.3395629352999 798.3390149679301 56.513 1 -1.391062647818761 0.39387165432040044 1.0 ['ENSG00000284395|ENST00000640283|PERCC1'] 52404 13279 KPGMGGDP True H1975_Epitope_Rep2 757.3428744939299 757.34232496793 56.207 1 -1.3910727804585432 0.39387165432040044 1.0 ['ENSG00000161992|ENST00000409413|PRR35'] 76026 25246 NRKFPRRRR True PC9_epitope_Rep2 1284.7751880186797 1284.77408993586 102.78 2 -1.3911057405592189 0.39387165432040044 1.0 ['ENST00000287934.3_1_7:90894005-90894200:+|nuORF'] 98120 18642 SIAPYRDTI True PC9_epitope_Rep2 1034.53965972418 1034.53856993586 77.072 2 -1.3911229146295536 0.39387165432040044 1.0 ['ENST00000373243.6_1_1:36023512-36023710:+|nuORF'] 131199 23531 VVPIEVLPTV True PC9_epitope_Rep6 1064.648147544 1064.6470499358602 103.65 2 -1.3911403108673235 0.39387165432040044 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 86331 13746 QQILSAVD True NCI_RA007_Epitope_Rep5 872.4603467743199 872.45924993586 59.557 2 -1.391163334055888 0.39387165432040044 1.0 ['ENSG00000162409|ENST00000371244|PRKAA2'] 45341 7845 ISDDYKIYCE True NCI_RA007_Epitope_Rep2 1247.53800504167 1247.5369099358602 35.144 2 -1.3911823166450967 0.39387165432040044 1.0 ['nc|ENSG00000121446|A5PLK6-4|RGSL1', 'nc|ENSG00000121446|A5PLK6-5|RGSL1', 'nc|ENSG00000121446|A5PLK6-3|RGSL1', 'nc|ENSG00000121446|A5PLK6-2|RGSL1', 'ENSG00000121446|ENST00000294854|RGSL1'] 126102 15436 VPEAGSTT True NCI_RA007_Epitope_Rep1 760.3602983798801 760.35974496793 64.124 1 -1.3911923429117228 0.39387165432040044 1.0 ['nc|ENSG00000110274|Q9UPV0-2|CEP164', 'ENSG00000110274|ENST00000278935|CEP164', 'ENST00000528706.5_1_11:117279912-117282881:+|nuORF', 'ENST00000533675.5_1_11:117265793-117282881:+|nuORF'] 56382 10628 LDRVYFGGF True PC9_epitope_Rep6 1072.5341804209197 1072.53308993586 51.698 2 -1.3912192474858975 0.39387165432040044 1.0 ['ENSG00000157881|ENST00000378466|PANK4'] 137812 9642 YPEYLSNFP True NCI_RA007_Epitope_Rep3 1128.51277627 1128.51112490379 45.006 3 -1.3912197993354816 0.39387165432040044 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 79778 22703 PHWPVKLFF True PC9_epitope_Rep6 1169.6385859198099 1169.63748993586 100.4 2 -1.391329400929257 0.39387886138260686 1.0 ['ENST00000558070.1_1_15:31352716-31354937:-|nuORF'] 3106 10215 AGARAVLVP True PC9_epitope_Rep1 852.5181364339599 852.51702993586 44.172 2 -1.3913477334101017 0.39388606827342665 1.0 ['ENSG00000162009|ENST00000689027|SSTR5'] 52933 20265 KRKKKKKFCY True NCI_RA007_Epitope_Rep5 1355.8223810215497 1355.82073490379 84.891 3 -1.3913764138568128 0.39389327499286597 1.0 ['nc|ENSG00000168594|Q9UKF5-2|ADAM29', 'nc|ENSG00000168594|Q9UKF5-3|ADAM29', 'ENSG00000168594|ENST00000359240|ADAM29'] 111589 9780 TLNIYQNLNR True NCI_RA007_Epitope_Rep2 1247.66223446835 1247.6611299358601 42.664 2 -1.3914397410025467 0.393900481540931 1.0 ['nc|ENSG00000133256|P35913-3|PDE6B', 'ENSG00000133256|ENST00000496514|PDE6B', 'PDE6B|p.K674Qfs*12|1|0.41|ENSG00000133256|chr4:663865-663866|-/T|frameshift_variant', 'nc|ENSG00000133256|P35913-2|PDE6B'] 66141 13736 LSPDLSHTTL True PC9_epitope_Rep2 1082.56078909158 1082.5596899358602 58.123 2 -1.3915054568685763 0.39391489412296243 1.0 ['ENSG00000198734|ENST00000367797|F5'] 75071 23883 NMNGCTQK True H1975_Epitope_Rep3 894.36877197194 894.36822496793 99.58 1 -1.3915302017184323 0.39391489412296243 1.0 ['ENST00000394961.6_1_4:95170895-95171954:+|nuORF'] 124568 8893 VLGPVPRPP True H1975_Epitope_Rep2 930.5650866263799 930.56398993586 39.178 2 -1.3915571858555107 0.39392210015694107 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2'] 42751 8955 IFELNKRLQNW True H1975_Epitope_Rep2 1459.7935829910698 1459.79194490379 39.399 3 -1.3916194868680671 0.39395308468772666 1.0 ['nc|ENSG00000198728|Q86U70-3|LDB1', 'nc|ENSG00000198728|Q86U70-2|LDB1', 'ENSG00000198728|ENST00000673968|LDB1'] 94352 2657 RYAFFRKDSWY True NCI_RA007_Epitope_Rep5 1537.74663279865 1537.74499490379 14.909 3 -1.3917517967407071 0.3939721792890263 1.0 ['ENSG00000179148|ENST00000448843|ALOXE3', 'nc|ENSG00000179148|Q9BYJ1-2|ALOXE3'] 28965 13172 FTFDLAYWSHN True NCI_RA007_Epitope_Rep2 1399.61970095003 1399.6186099358601 55.868 2 -1.3917948284348378 0.3939772213900183 1.0 ['nc|ENSG00000223519|B7ZC32|KIF28P'] 78747 9785 PEGSGWPR True NCI_RA007_Epitope_Rep5 884.41406528824 884.41296993586 44.287 2 -1.3918061425667017 0.3939772213900183 1.0 ['ENST00000354619.9_1_1:236445094-236445265:-|nuORF'] 45095 22380 IQRWRRYYLPA True PC9_epitope_Rep2 1520.83645086256 1520.8353499358602 91.578 2 -1.39184644146325 0.3939772213900183 1.0 ['ENST00000372070.7_1_1:46016515-46016749:+|nuORF'] 119339 9635 VEMHHWCIP True PC9_epitope_Rep4 1150.5052058751 1150.50410993586 44.686 2 -1.3918471573480051 0.3939772213900183 1.0 ['nc|ENSG00000198400|P04629-4|NTRK1', 'nc|ENSG00000198400|P04629-3|NTRK1', 'nc|ENSG00000198400|P04629-2|NTRK1', 'ENSG00000198400|ENST00000524377|NTRK1', 'ENST00000530298.5_1_1:156807654-156845592:+|nuORF'] 54923 14163 LAGRGSLPAL True PC9_epitope_Rep6 953.5658149023699 953.56470993586 66.351 2 -1.3919867310225005 0.3939844260833383 1.0 ['ENST00000494150.1_1_22:39478019-39478325:+|nuORF'] 117328 7233 VAAKNQQI True PC9_epitope_Rep4 870.4923156089399 870.49120993586 35.126 2 -1.3921567507677466 0.39405107232868897 1.0 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 17974 4877 EIGAQGGK True H1975_Epitope_Rep1 758.3922672145 758.39116993586 23.837 2 -1.3921791694547259 0.39405359138353263 1.0 ['ENST00000564646.1_1_16:89005738-89005978:-|nuORF'] 98668 13989 SIQEIQRVL True PC9_epitope_Rep4 1084.62405805448 1084.62296993586 61.715 2 -1.3921815659683865 0.39405359138353263 1.0 ['nc|ENSG00000205683|Q92784-4|DPF3', 'DPF3|p.G268Afs*4|1|0.42|ENSG00000205683|chr14:72674308-72674308|C/-|frameshift_variant', 'nc|ENSG00000205683|Q92784-2|DPF3', 'nc|ENSG00000205683|Q92784-5|DPF3', 'ENSG00000205683|ENST00000556509|DPF3', 'nc|ENSG00000205683|Q92784-3|DPF3'] 120172 11536 VFLFCFVLF True PC9_epitope_Rep6 1133.5983609006098 1133.5967249037901 55.461 3 -1.3923810200014368 0.3940726827470607 1.0 ['ENST00000520201.5_1_8:42177053-42177326:+|nuORF'] 4975 24968 ALISFNKRTLV True PC9_epitope_Rep5 1260.7554065772 1260.75376490379 101.21 3 -1.392426079324959 0.39407520119827394 1.0 ['nc|ENSG00000159921|Q9Y223-4|GNE', 'nc|ENSG00000159921|Q9Y223-3|GNE', 'ENSG00000159921|ENST00000642385|GNE', 'nc|ENSG00000159921|Q9Y223-2|GNE'] 56688 17746 LEAEFQRLP True PC9_epitope_Rep1 1101.5818588893299 1101.5807699358602 73.058 2 -1.392447519816882 0.39407520119827394 1.0 ['nc|ENSG00000081237|P08575-8|PTPRC', 'nc|ENSG00000081237|P08575-5|PTPRC', 'nc|ENSG00000081237|P08575-6|PTPRC', 'ENSG00000081237|ENST00000442510|PTPRC', 'nc|ENSG00000081237|P08575-4|PTPRC', 'nc|ENSG00000081237|P08575-9|PTPRC', 'nc|ENSG00000081237|P08575-10|PTPRC', 'nc|ENSG00000081237|P08575-7|PTPRC'] 74369 5323 NISSENLPV True NCI_RA007_Epitope_Rep4 971.49237517859 971.49126993586 27.038 2 -1.3925484751120978 0.3941537291077245 1.0 ['ENST00000295549.8_1_2:177497817-177502252:-|nuORF'] 7582 7131 ASGTKLLEA True PC9_epitope_Rep5 888.4916469025999 888.49054993586 32.399 2 -1.3926467785082455 0.3941800199705197 1.0 ['ENST00000450915.1_1_7:88268512-88269193:+|nuORF', 'ENST00000447052.1_1_21:24762586-24762793:+|nuORF'] 139165 5394 YSSLGDFVSEM True PC9_epitope_Rep2 1233.5223549775299 1233.5212499358602 26.141 2 -1.3926612833819931 0.3941800199705197 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 77815 8967 PAEPDPDFDP True H1975_Epitope_Rep2 1098.4505699362599 1098.4494699358602 39.445 2 -1.3927739051464816 0.39418756686081063 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 101860 21536 SPLALGPETPQ True PC9_epitope_Rep4 1108.57643915572 1108.5758749679298 91.017 1 -1.3928499761130428 0.39418756686081063 1.0 ['ENST00000483781.5_1_2:98330105-98349944:+|nuORF'] 60624 17144 LISWYDNEF True PC9_epitope_Rep5 1185.53423999057 1185.5331499358601 70.965 2 -1.3928501204565993 0.39418756686081063 1.0 ['ENSG00000111640|ENST00000229239|GAPDH', 'nc|ENSG00000111640|P04406-2|GAPDH', 'ENST00000466525.1_1_12:6646524-6647333:+|nuORF', 'ENST00000452570.1_1_X:39646388-39646742:-|nuORF', 'ENST00000405405.2_1_6:80662724-80663060:-|nuORF'] 38454 22663 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 93.614 2 -1.392880423065869 0.39418756686081063 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 97264 19361 SFPARLAHRL True PC9_epitope_Rep5 1166.6672602791398 1166.6661699358601 79.519 2 -1.392911210907316 0.39418756686081063 1.0 ['ENST00000526693.5_1_11:834549-835112:+|nuORF'] 115742 5309 TVLLLPLLLL True PC9_epitope_Rep5 1106.76786875386 1106.76676993586 25.433 2 -1.3929182080322549 0.39418756686081063 1.0 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155106165-155106540:+|nuORF'] 80095 19248 PKGRIVPRGID True NCI_RA007_Epitope_Rep4 1206.71968977482 1206.71858993586 83.219 2 -1.393099009437993 0.3942185401338389 1.0 ['ENSG00000177602|ENST00000325418|HASPIN'] 53002 18618 KRRKHQVP True NCI_RA007_Epitope_Rep2 1047.64137988447 1047.64087496793 77.218 1 -1.3931605408433059 0.3942260836492863 1.0 ['ENST00000272462.2_1_2:110873982-110874102:-|nuORF'] 21412 5954 ERNHWHYRDLE True H1975_Epitope_Rep3 1553.71237254825 1553.7112699358602 27.913 2 -1.3931926684234006 0.3942260836492863 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 18995 7196 ELGEKKPR True H1975_Epitope_Rep3 955.5450794577899 955.5439899358599 32.654 2 -1.3932253174451972 0.3942260836492863 1.0 ['ENST00000588926.5_1_19:44617677-44619969:+|nuORF'] 75615 16102 NQSDHTST True NCI_RA007_Epitope_Rep4 888.3573382577601 888.35624993586 69.834 2 -1.3932366569312782 0.3942260836492863 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 108130 6167 TDPRCKEMRQL True H1975_Epitope_Rep3 1375.6700393540698 1375.6689499358602 28.735 2 -1.3932506658735888 0.3942260836492863 1.0 ['ENST00000367959.6_1_1:161676930-161676990:+|nuORF'] 16524 8580 EEPRFQVP True PC9_epitope_Rep3 1000.4977949121998 1000.49668993586 37.954 2 -1.3932841953310495 0.3942260836492863 1.0 ['ENST00000510293.1_1_4:156835507-156839956:+|nuORF', 'ENSG00000151790|ENST00000536354|TDO2'] 82938 5346 PWLYDLWEVWN True PC9_epitope_Rep1 1519.7136013348697 1519.71196490379 25.403 3 -1.393320166174852 0.3942451686515011 1.0 ['ENSG00000154227|ENST00000679737|CERS3'] 131194 25075 VVPIEVLPTV True NCI_RA007_Epitope_Rep1 1064.648147544 1064.64757496793 103.77 1 -1.3933617158101148 0.3942880233898668 1.0 ['ENSG00000164880|ENST00000404767|INTS1'] 110301 10344 TIHGSKKAP True PC9_epitope_Rep1 937.53451477409 937.53340993586 44.669 2 -1.3934077364302897 0.3943071072022819 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B', 'ENSG00000166262|ENST00000299338|FAM227B'] 16969 9956 EGGWVRRP True NCI_RA007_Epitope_Rep4 955.4987979717099 955.49770993586 45.139 2 -1.3934149101795847 0.39431430574868376 1.0 ['CPZ|p.G340Rfs*17|1|0.27|ENSG00000109625|chr4:8606847-8606848|-/A|frameshift_variant', 'ENST00000514302.5_1_4:8602857-8612970:+|nuORF', 'nc|ENSG00000109625|Q66K79-2|CPZ', 'ENSG00000109625|ENST00000360986|CPZ'] 15289 3868 EAHQLYGRLPW True H1975_Epitope_Rep3 1368.6938689497997 1368.69223490379 19.995 3 -1.393453968991052 0.39432150412398087 1.0 ['ENSG00000131067|ENST00000336431|GGT7', 'nc|ENSG00000131067|Q9UJ14-4|GGT7'] 40254 23713 HRLALTKL True H1975_Epitope_Rep2 950.60253476426 950.60142993586 97.711 2 -1.3935752843707092 0.3943502959142443 1.0 ['ENST00000557271.5_1_14:105211116-105211251:+|nuORF'] 12833 10903 DLKPFTEYVFR True H1975_Epitope_Rep1 1413.7292513990099 1413.72814993586 46.901 2 -1.3936341427202856 0.3943502959142443 1.0 ['nc|ENSG00000134352|P40189-3|IL6ST', 'ENSG00000134352|ENST00000381298|IL6ST', 'nc|ENSG00000134352|P40189-2|IL6ST'] 71236 23500 MFVLHHLP True NCI_RA007_Epitope_Rep4 992.52659294268 992.52548993586 101.97 2 -1.3936400980715113 0.3943502959142443 1.0 ['ENST00000343137.8_1_1:14107102-14107186:+|nuORF'] 95438 10819 SALKEYEK True PC9_epitope_Rep5 966.5022115862998 966.50110993586 46.605 2 -1.3937293563345885 0.3943502959142443 1.0 ['ENSG00000189233|ENST00000413272|NUGGC'] 122044 23413 VGQRLRSPRRA True PC9_epitope_Rep3 1294.7694339318998 1294.76832993586 95.337 2 -1.3938021746260056 0.3943693773990754 1.0 ['ENST00000492837.1_1_7:102004828-102016337:+|nuORF'] 66144 13063 LSPDLSHTTL True PC9_epitope_Rep4 1082.56078909158 1082.5596899358602 58.14 2 -1.3938220666470742 0.39438845843038456 1.0 ['ENSG00000198734|ENST00000367797|F5'] 103214 20997 SQRIQRPGR True PC9_epitope_Rep6 1096.62137271588 1096.62026993586 93.588 2 -1.3939253522402455 0.39441255807873754 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 105367 11742 STYLNNPYVR True PC9_epitope_Rep3 1225.60913626633 1225.60802993586 50.184 2 -1.3939494933083165 0.39441255807873754 1.0 ['nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'ENST00000480961.1_1_20:44522693-44523773:+|nuORF'] 119714 13887 VETFGDLAFG True H1975_Epitope_Rep1 1054.4971262058598 1054.49657496793 58.566 1 -1.3940143486371463 0.39441255807873754 1.0 ['nc|ENSG00000188986|Q8WX92|NELFB', 'ENSG00000188986|ENST00000343053|NELFB'] 23961 6643 EYNWATVGGR True H1975_Epitope_Rep3 1151.5359713260698 1151.5348699358601 30.507 2 -1.3940245596641005 0.39441255807873754 1.0 ['ENSG00000054219|ENST00000263636|LY75', 'nc|ENSG00000054219|O60449-3|LY75', 'nc|ENSG00000054219|O60449-2|LY75', 'LY75|p.E1442Kfs*4|1|0.35|ENSG00000054219|chr2:159816862-159816862|C/-|frameshift_variant', 'ENST00000484559.1_1_2:160728960-160761235:-|nuORF', 'LY75|p.G567A|1|0.18|ENSG00000054219|chr2:159878398-159878398|C/G|missense_variant'] 81062 22269 PPCFPLCL True PC9_epitope_Rep3 888.42376766692 888.42266993586 90.943 2 -1.3940323440280007 0.39441255807873754 1.0 ['ENST00000491241.1_1_1:33476368-33477090:-|nuORF'] 48079 4359 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 21.758 3 -1.3941245189768539 0.394438833105579 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 114444 12447 TSEDPSKLEAK True NCI_RA007_Epitope_Rep5 1203.5982967991101 1203.5971899358601 54.534 2 -1.3941333147684338 0.394438833105579 1.0 ['ENSG00000131203|ENST00000518237|IDO1'] 110843 23393 TKTQVGLIQ True H1975_Epitope_Rep2 986.5760452328998 986.57494993586 96.445 2 -1.3941491362064058 0.3944460288036504 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 49268 19335 KHETQSLA True NCI_RA007_Epitope_Rep3 912.46649478392 912.46538993586 84.408 2 -1.3942757761462463 0.39445606197424077 1.0 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-5|TACC1', 'nc|ENSG00000147526|O75410-4|TACC1', 'nc|ENSG00000147526|O75410-6|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'nc|ENSG00000147526|O75410-10|TACC1', 'ENST00000522752.5_1_8:38614850-38697853:+|nuORF', 'ENST00000522955.5_1_8:38663104-38684943:+|nuORF'] 125438 10302 VLTPGPPL True NCI_RA007_Epitope_Rep1 792.47454028648 792.47344993586 44.069 2 -1.3942995583176854 0.39445606197424077 1.0 ['ENST00000264080.11_2_19:6730008-6730326:-|nuORF'] 31846 23984 GEPHRRRRK True PC9_epitope_Rep2 1190.6857043079397 1190.6840549037902 97.749 3 -1.394305224229448 0.39445606197424077 1.0 ['ENSG00000187553|ENST00000651965|CYP26C1'] 48257 14950 KDHLKNHLH True H1975_Epitope_Rep3 1140.61522470628 1140.61357490379 62.892 3 -1.394322655159171 0.39445606197424077 1.0 ['nc|ENSG00000181690|Q6DJT9-2|PLAG1', 'ENSG00000181690|ENST00000316981|PLAG1'] 137542 15587 YLRHFNELE True PC9_epitope_Rep1 1219.5985715826298 1219.59691490379 64.777 3 -1.3944617987415726 0.39445606197424077 1.0 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A', 'ENSG00000198925|ENST00000361242|ATG9A', 'nc|ENSG00000198925|Q7Z3C6-2|ATG9A'] 121075 9352 VGFVLGGF True NCI_RA007_Epitope_Rep2 794.4326754744998 794.43156993586 40.984 2 -1.3944645953771844 0.39445606197424077 1.0 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000590244.1_1_17:58543761-58603427:-|nuORF'] 30755 6137 GAPATTRLSTR True PC9_epitope_Rep2 1129.62036965637 1129.61872490379 29.0 3 -1.3944800768524006 0.39445606197424077 1.0 ['ENST00000500074.2_1_3:129824416-129830240:-|nuORF'] 18918 8909 ELERLHPI True PC9_epitope_Rep4 1005.5607295219299 1005.55962993586 41.805 2 -1.3945630733735987 0.39445606197424077 1.0 ['ENST00000610158.1_1_10:25242209-25242413:+|nuORF'] 11350 5677 DFDSDEDFNAF True NCI_RA007_Epitope_Rep3 1320.4782412360798 1320.47659490379 29.313 3 -1.3946127117762843 0.394458569968871 1.0 ['ENSG00000124571|ENST00000265351|XPO5'] 111255 15113 TLGQIYYLKRF True PC9_epitope_Rep6 1400.7816213250396 1400.7799649037902 70.191 3 -1.394613240364507 0.394458569968871 1.0 ['ENST00000543425.1_1_12:124075023-124081273:+|nuORF', 'ENSG00000086598|ENST00000262225|TMED2'] 12314 8322 DITSDITSWEG True NCI_RA007_Epitope_Rep2 1222.5353621893798 1222.53426993586 37.011 2 -1.3946808500909313 0.3944657644920218 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST'] 111430 24145 TLKLQKKARK True PC9_epitope_Rep3 1212.8030254759599 1212.80137490379 98.157 3 -1.3948275876490723 0.39450860184393116 1.0 ['ENSG00000132613|ENST00000338779|MTSS2', 'nc|ENSG00000132613|Q765P7-2|MTSS2'] 93761 7710 RTSSTPEP True PC9_epitope_Rep1 873.4192102383299 873.41810993586 34.477 2 -1.3948538151898866 0.3945157956017061 1.0 ['nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 120173 20325 VFLFLKKVSPF True PC9_epitope_Rep5 1323.79548048403 1323.7943899358602 83.217 2 -1.3949128590579434 0.394522989188547 1.0 ['ENST00000336278.8_1_16:69337832-69338117:+|nuORF'] 78785 6975 PEKSSGDVP True H1975_Epitope_Rep3 914.4345259492999 914.43342993586 31.791 2 -1.395073334005647 0.39453018260446 1.0 ['nc|ENSG00000129757|P49918|CDKN1C', 'ENSG00000129757|ENST00000440480|CDKN1C', 'ENST00000471157.2_1_11:2905236-2905503:-|nuORF'] 57468 18290 LEKALKLYF True PC9_epitope_Rep1 1123.6641319613097 1123.66302993586 75.141 2 -1.395105444264631 0.39453737584945114 1.0 ['EXOC8|p.E630K|2|0.35|ENSG00000116903|chr1:231335858-231335858|C/T|missense_variant'] 57160 5969 LEERRWER True PC9_epitope_Rep5 1172.6050539453997 1172.60341490379 27.955 3 -1.3951539879537844 0.3945445689235266 1.0 ['ENSG00000268350|ENST00000622447|FAM156A', 'ENSG00000179304|ENST00000416841|FAM156B'] 8000 15852 ATDPNSEWKEH True H1975_Epitope_Rep3 1312.56839365316 1312.5672899358601 66.424 2 -1.395240317599196 0.3945827145827146 1.0 ['nc|ENSG00000107021|Q9NVG8-3|TBC1D13', 'ENSG00000107021|ENST00000372648|TBC1D13'] 32814 21236 GIFWFDTREI True PC9_epitope_Rep4 1282.6346227381798 1282.63352993586 89.848 2 -1.395250922849877 0.3945827145827146 1.0 ['ENSG00000278870|ENST00000623849|OR51G1'] 47127 13008 IWEEAYQR True H1975_Epitope_Rep1 1093.5192586327698 1093.5181699358602 55.118 2 -1.3953491237588775 0.3946136666033074 1.0 ['ENST00000496676.5_1_1:6272096-6272816:+|nuORF', 'ENST00000492476.1_1_1:6271125-6272816:+|nuORF', 'nc|ENSG00000158286|Q6ZRF8-4|RNF207', 'ENSG00000158286|ENST00000377939|RNF207'] 110072 4687 TIAEAKFYRQ True H1975_Epitope_Rep3 1225.64552177505 1225.64386490379 23.152 3 -1.3954095061829406 0.39462085842926214 1.0 ['BCOR|p.E1696K|1|0.16|ENSG00000183337|chrX:40052291-40052291|C/T|missense_variant'] 85275 17347 QKRRKRPV True PC9_epitope_Rep1 1066.6835790496198 1066.68248993586 71.537 2 -1.3955511085884469 0.39466368884981823 1.0 ['ENST00000493458.2_1_16:74346603-74346963:-|nuORF'] 57380 13623 LEHLRITV True PC9_epitope_Rep3 979.58146496651 979.58036993586 57.465 2 -1.3956402236104795 0.39467087991066657 1.0 ['ENSG00000156510|ENST00000354624|HKDC1'] 76594 5627 NTENILKTV True NCI_RA007_Epitope_Rep5 1030.56587447202 1030.56476993586 28.332 2 -1.395690629517883 0.39467338235468813 1.0 ['ENSG00000105605|ENST00000391767|CACNG7'] 115113 16088 TTWERLYFFTQ True NCI_RA007_Epitope_Rep1 1490.7194149912998 1490.7183099358601 66.684 2 -1.3957095615606074 0.39467338235468813 1.0 ['ENST00000547809.5_1_12:105570964-105626916:-|nuORF', 'ENSG00000136044|ENST00000258530|APPL2', 'nc|ENSG00000136044|Q8NEU8-3|APPL2', 'nc|ENSG00000136044|Q8NEU8-2|APPL2'] 12495 13685 DKYRDQYNWFF True PC9_epitope_Rep3 1580.7048275563195 1580.70372993586 57.712 2 -1.3957940010673964 0.3946805730441187 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 12670 8130 DLERELDEP True H1975_Epitope_Rep1 1114.51423282198 1114.5131299358602 36.21 2 -1.3958572036804215 0.3946952689781325 1.0 ['nc|ENSG00000158691|O43309-2|ZSCAN12', 'ENSG00000158691|ENST00000684592|ZSCAN12', 'ENST00000526291.1_1_6:28553050-28554287:-|nuORF', 'ENSG00000137185|ENST00000252207|ZSCAN9', 'nc|ENSG00000137185|O15535-2|ZSCAN9', 'ENSG00000166529|ENST00000292450|ZSCAN21', 'ENSG00000232040|ENST00000452236|SCAND3', 'ENSG00000196812|ENST00000340487|ZSCAN16'] 128963 21182 VSVPVHGA True PC9_epitope_Rep3 764.4180880395201 764.41698993586 86.765 2 -1.3959382558121172 0.3946952689781325 1.0 ['ENST00000312438.7_1_11:67134982-67141182:-|nuORF'] 125221 11297 VLQQHVLEFY True NCI_RA007_Epitope_Rep1 1274.6659228664598 1274.66482993586 47.921 2 -1.3959477726663847 0.3946952689781325 1.0 ['ENSG00000205339|ENST00000379719|IPO7', 'IPO7|p.E772Gfs*2|1|0.16|ENSG00000205339|chr11:9437795-9437796|AA/-|frameshift_variant'] 81714 13695 PSAAWHFR True NCI_RA007_Epitope_Rep4 970.47733425114 970.47622993586 59.902 2 -1.3959480026271467 0.3946952689781325 1.0 ['ENSG00000163395|ENST00000335211|IGFN1', 'nc|ENSG00000163395|Q86VF2|IGFN1', 'nc|ENSG00000163395|Q86VF2-4|IGFN1'] 112248 12433 TLYLFNWIWRY True NCI_RA007_Epitope_Rep2 1573.80817042605 1573.80706993586 52.971 2 -1.3959763913173477 0.3946952689781325 1.0 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 48703 15582 KEMMKETFKYF True H1975_Epitope_Rep1 1480.7094445545602 1480.70834993586 65.219 2 -1.3960110958986602 0.3946952689781325 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 54623 10021 LADLNRFIG True NCI_RA007_Epitope_Rep4 1017.5607295219299 1017.55962993586 45.39 2 -1.3960926536753338 0.3946952689781325 1.0 ['LRRK2|p.A549D|1|0.31|ENSG00000188906|chr12:40263891-40263891|C/A|missense_variant'] 78947 10945 PFGGSSEG True PC9_epitope_Rep1 736.30278350376 736.3022349679301 46.988 1 -1.3961424673806428 0.394714336619551 1.0 ['ENST00000592486.1_1_19:1475033-1475351:-|nuORF'] 82699 12693 PVPEYIKG True NCI_RA007_Epitope_Rep5 901.4909186266099 901.48982993586 55.484 2 -1.3961753450802286 0.39471683770429494 1.0 ['ENSG00000278053|ENST00000617633|DDX52'] 131546 19291 VVVKRQETV True PC9_epitope_Rep6 1056.62914343492 1056.6280499358602 86.851 2 -1.3962047160390418 0.39471683770429494 1.0 ['ENSG00000177311|ENST00000321464|ZBTB38'] 110308 15183 TIHSAPPGVLV True PC9_epitope_Rep1 1089.61824439805 1089.6171499358602 63.223 2 -1.3962735470754746 0.3947240269381065 1.0 ['nc|ENSG00000204936|Q8N6Q3|CD177', 'ENSG00000204936|ENST00000618265|CD177'] 58738 16650 LFLKRTAP True PC9_epitope_Rep6 944.5807366905199 944.57962993586 76.513 2 -1.3963662566171977 0.394762159273116 1.0 ['nc|ENSG00000151812|A4IF30-2|SLC35F4', 'ENSG00000151812|ENST00000556826|SLC35F4', 'nc|ENSG00000151812|A4IF30|SLC35F4', 'SLC35F4|p.E361Kfs*14|1|0.26|ENSG00000151812|chr14:57569941-57569941|C/-|frameshift_variant'] 90774 20220 RKRPPSRKKFT True NCI_RA007_Epitope_Rep5 1399.8524352798695 1399.8507749037901 84.718 3 -1.396381731316801 0.394762159273116 1.0 ['ENST00000534894.5_2_10:114710255-114710447:+|nuORF'] 108195 22549 TDWIWAGL True NCI_RA007_Epitope_Rep5 960.4705175351999 960.46942993586 93.918 2 -1.3964763883807683 0.39480497885885313 1.0 ['nc|ENSG00000179403|Q6PCB0-2|VWA1', 'ENSG00000179403|ENST00000476993|VWA1'] 118222 13804 VAYHLLYKRMW True H1975_Epitope_Rep1 1478.7856611596599 1478.7845699358602 58.243 2 -1.3966723091761386 0.39484932677922635 1.0 ['ENST00000508970.1_1_2:79924974-80004158:+|nuORF'] 79188 20194 PGELQQQSDTS True H1975_Epitope_Rep3 1188.5258601348398 1188.5242049037902 84.466 3 -1.3967505471511616 0.39484932677922635 1.0 ['ENSG00000144857|ENST00000682979|BOC', 'nc|ENSG00000144857|Q9BWV1|BOC'] 57833 16128 LEPWERTV True PC9_epitope_Rep4 1028.52909504048 1028.5279899358602 69.975 2 -1.3967657102446007 0.39484932677922635 1.0 ['ENSG00000165389|ENST00000298130|SPTSSA'] 95251 16658 SADLRQAH True PC9_epitope_Rep4 896.44642804568 896.44532993586 72.041 2 -1.3967793045490982 0.39484932677922635 1.0 ['ENSG00000106948|ENST00000374088|AKNA', 'nc|ENSG00000106948|Q7Z591-7|AKNA', 'nc|ENSG00000106948|Q7Z591-2|AKNA', 'nc|ENSG00000106948|Q7Z591-4|AKNA', 'nc|ENSG00000106948|Q7Z591-5|AKNA', 'nc|ENSG00000106948|Q7Z591-8|AKNA'] 79109 11231 PFYNESFS True H1975_Epitope_Rep2 989.4130622287299 989.41196993586 48.242 2 -1.3967924060546186 0.39484932677922635 1.0 ['ENSG00000103528|ENST00000355377|SYT17'] 23054 11518 EVKVKCVL True NCI_RA007_Epitope_Rep4 916.5415743004799 916.54046993586 51.25 2 -1.3968076518001453 0.39484932677922635 1.0 ['ENST00000397766.3_1_15:34394281-34394365:+|nuORF'] 76927 23402 NVMWMIKI True H1975_Epitope_Rep1 1033.5452797819298 1033.54418993586 97.262 2 -1.3968101446876589 0.39484932677922635 1.0 ['ENSG00000152078|ENST00000370203|TLCD4'] 22113 7900 ESVTSVTEL True PC9_epitope_Rep1 963.47605640811 963.47494993586 35.212 2 -1.3968935064925663 0.39484932677922635 1.0 ['ENSG00000108510|ENST00000397786|MED13', 'MED13|p.H1262Pfs*53|1|0.19|ENSG00000108510|chr17:61982217-61982218|GT/-|frameshift_variant'] 45697 9403 ISLGPGDRDV True NCI_RA007_Epitope_Rep5 1027.52982331647 1027.5287299358602 42.808 2 -1.3969013194808324 0.39484932677922635 1.0 ['nc|ENSG00000158714|Q9P0V8-2|SLAMF8', 'ENSG00000158714|ENST00000289707|SLAMF8'] 128806 10947 VSRQHKEFLR True NCI_RA007_Epitope_Rep3 1298.72075240398 1298.7196499358602 50.147 2 -1.3969959775648766 0.39484932677922635 1.0 ['nc|ENSG00000101958|P23416-3|GLRA2', 'nc|ENSG00000101958|P23416-2|GLRA2', 'ENSG00000101958|ENST00000218075|GLRA2'] 93915 16844 RVIKSCKFLE True H1975_Epitope_Rep3 1221.69036379249 1221.68872490379 70.343 3 -1.3970119426513103 0.39484932677922635 1.0 ['ENST00000570827.6_1_17:9548127-9548559:+|nuORF'] 99752 7061 SLGLALQGI True H1975_Epitope_Rep2 870.51746772762 870.51636993586 32.088 2 -1.397033963909812 0.39484932677922635 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|354|2|anti-sense'] 80120 22687 PKGVSRKLDRL True PC9_epitope_Rep4 1267.77245362367 1267.7707949037901 95.493 3 -1.3970825049142632 0.39484932677922635 1.0 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 27130 19965 FLRAELIVL True PC9_epitope_Rep5 1072.66446631448 1072.6633699358601 81.848 2 -1.3972021274464557 0.39484932677922635 1.0 ['ENST00000366558.7_1_1:241695491-241695605:+|nuORF'] 28842 7305 FTDPGKPESQ True H1975_Epitope_Rep3 1104.50875351872 1104.5076499358602 33.073 2 -1.397234598010481 0.39484932677922635 1.0 ['ENST00000474511.1_1_1:16270449-16270866:-|nuORF'] 74917 5296 NLSKTLSGP True NCI_RA007_Epitope_Rep3 915.5025459394699 915.50199496793 27.841 1 -1.3972511040199673 0.39484932677922635 1.0 ['ENSG00000184811|ENST00000333813|TRARG1'] 133112 12983 WAWPRTPWRRW True H1975_Epitope_Rep1 1596.8214695047598 1596.82036993586 55.018 2 -1.3973377421352124 0.39484932677922635 1.0 ['ENST00000608648.1_1_19:18235548-18239224:+|nuORF'] 76461 14815 NTDAEGRLIL True PC9_epitope_Rep1 1100.5825871653199 1100.5814899358602 61.806 2 -1.3973623638867547 0.39484932677922635 1.0 ['nc|ENSG00000002549|P28838-2|LAP3', 'ENSG00000002549|ENST00000226299|LAP3', 'ENST00000503467.1_1_4:17587853-17609209:+|nuORF'] 19947 14923 EMDINPGSPDS True H1975_Epitope_Rep2 1160.4655683774 1160.46446993586 62.555 2 -1.3973647610069122 0.39484932677922635 1.0 ['ENST00000462126.5_1_19:35996627-36001120:-|nuORF'] 55662 10663 LDASDEFLKER True NCI_RA007_Epitope_Rep1 1321.65139500113 1321.6502899358602 45.466 2 -1.39742722482928 0.39484932677922635 1.0 ['ENSG00000140057|ENST00000267584|AK7'] 91708 19103 RPGSRQPIAIL True NCI_RA007_Epitope_Rep5 1206.71968977482 1206.71858993586 80.351 2 -1.3974853345244667 0.39484932677922635 1.0 ['ENST00000564694.1_1_8:101926159-101926390:-|nuORF'] 67652 7613 LTFFLHFNL True PC9_epitope_Rep2 1150.61751612206 1150.61587490379 34.657 3 -1.3975120754311798 0.39484932677922635 1.0 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|0|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|91'] 105062 9374 STIVGVSVAI True PC9_epitope_Rep6 944.55424715916 944.55314993586 46.251 2 -1.3975403117103298 0.39484932677922635 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|99|2|sense'] 119320 21588 VELRVLALP True PC9_epitope_Rep3 1008.6331661861998 1008.63206993586 88.334 2 -1.397621075418864 0.39484932677922635 1.0 ['ENSG00000173621|ENST00000309602|LRFN4'] 130241 6347 VTSPRLSL True NCI_RA007_Epitope_Rep4 871.51271670035 871.51160993586 31.019 2 -1.3976572677440162 0.39484932677922635 1.0 ['nc|ENSG00000105053|Q8IV63-2|VRK3', 'ENSG00000105053|ENST00000316763|VRK3', 'ENST00000599138.5_1_19:50512054-50519419:-|nuORF', 'ENST00000424804.6_1_19:50496160-50519419:-|nuORF', 'ENST00000594090.5_1_19:50491627-50519408:-|nuORF'] 136579 6101 YHTRWYFKYFL True H1975_Epitope_Rep1 1622.8034193987799 1622.80177490379 28.536 3 -1.3977176065392385 0.39484932677922635 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'nc|ENSG00000136895|Q5VVW2-3|GARNL3'] 134425 8309 WTEWNYFDKHL True H1975_Epitope_Rep3 1537.69901389989 1537.6973549037903 36.945 3 -1.3977557341010027 0.3948518237082067 1.0 ['ENSG00000184949|ENST00000535113|FAM227A', 'nc|ENSG00000184949|F5H4B4-2|FAM227A', 'ENST00000540952.5_1_22:38982050-39003412:-|nuORF'] 122633 14465 VGTNGGLK True NCI_RA007_Epitope_Rep3 744.41300265908 744.4124549679301 64.201 1 -1.3978145490649523 0.3948518237082067 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 45807 7734 ISPELGVVFF True H1975_Epitope_Rep1 1106.60119735158 1106.60010993586 34.711 2 -1.397885120727338 0.3948590086078955 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 19857 9570 ELVLERPLDR True NCI_RA007_Epitope_Rep1 1238.6982856239 1238.69665490379 41.224 3 -1.3979494360191318 0.39487806615534393 1.0 ['PCDHGA5|p.Q198R|1|0.31|ENSG00000253485|chr5:141364923-141364923|A/G|missense_variant'] 133734 24701 WLKVGAGV True PC9_epitope_Rep4 828.4857736765198 828.4852249679301 103.51 1 -1.3980073181922668 0.39488525057285667 1.0 ['nc|ENSG00000164659|A8MWY0-3|ELAPOR2', 'ENSG00000164659|ENST00000450689|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-2|ELAPOR2'] 133735 26693 WLKVKHLVNL True PC9_epitope_Rep2 1248.7706627185198 1248.76956993586 109.46 2 -1.3981152001433024 0.39489304114532636 1.0 ['COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF'] 95941 4414 SDYSFSVIAMS True NCI_RA007_Epitope_Rep1 1205.52744035797 1205.52634993586 21.282 2 -1.3981253215389386 0.39489304114532636 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 26856 6603 FLEVAEAP True NCI_RA007_Epitope_Rep2 874.4436340810198 874.44252993586 30.292 2 -1.398172394057291 0.39489304114532636 1.0 ['CON__Q2KJF1'] 109178 13973 TFRFRKYREHH True NCI_RA007_Epitope_Rep1 1575.81711240031 1575.8160099358602 58.377 2 -1.398205977256179 0.39489304114532636 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|28|2|sense'] 64565 20578 LRDNKIRQLP True NCI_RA007_Epitope_Rep4 1251.7411534953899 1251.74004993586 89.128 2 -1.398209975870168 0.39489304114532636 1.0 ['ENSG00000083782|ENST00000261172|EPYC'] 32131 9017 GFAAHSLTNS True PC9_epitope_Rep2 1003.47230844035 1003.47120993586 40.034 2 -1.3982192160952729 0.39489304114532636 1.0 ['ENST00000531585.1_1_11:126862365-126865054:+|nuORF'] 97427 15162 SGGGGFFSSL True PC9_epitope_Rep5 914.4133965819 914.41284496793 63.327 1 -1.398220091338548 0.39489304114532636 1.0 ['nc|ENSG00000008056|P17600-2|SYN1', 'ENSG00000008056|ENST00000295987|SYN1'] 122651 13908 VGTPPKSP True PC9_epitope_Rep3 781.43340375049 781.43230993586 58.578 2 -1.398238143239505 0.39489304114532636 1.0 ['ENST00000556548.5_1_14:24910766-24911042:-|nuORF', 'ENST00000555778.1_1_14:24910766-24911445:-|nuORF'] 10416 22114 CLQKLLYF True PC9_epitope_Rep2 1026.5572243646197 1026.55612993586 90.538 2 -1.3982504879354383 0.39489304114532636 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 102110 21305 SPQIRKTAT True PC9_epitope_Rep3 1000.56654317836 1000.56544993586 87.245 2 -1.3982907886356077 0.39489304114532636 1.0 ['ENSG00000266028|ENST00000573034|SRGAP2'] 11540 9900 DGLSKMDTE True H1975_Epitope_Rep3 994.4277263167 994.42662993586 43.112 2 -1.3983218136005269 0.39489304114532636 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 66875 10420 LSWKEEEL True PC9_epitope_Rep1 1032.51277627 1032.51166993586 44.967 2 -1.3984156693970156 0.3948936473269395 1.0 ['nc|ENSG00000171804|Q6ZQQ6|WDR87', 'nc|ENSG00000171804|Q6ZQQ6-2|WDR87', 'ENSG00000171804|ENST00000447313|WDR87'] 63438 7182 LPGTDPQDAER True PC9_epitope_Rep1 1197.56257999673 1197.56092490379 32.436 3 -1.3984203454867585 0.3948936473269395 1.0 ['ENSG00000126062|ENST00000266025|TMEM115'] 125195 8367 VLQGSRASV True PC9_epitope_Rep4 915.5137793295099 915.51268993586 39.641 2 -1.3984312538036563 0.3948936473269395 1.0 ['nc|ENSG00000154263|Q8WWZ4-2|ABCA10', 'ENSG00000154263|ENST00000690296|ABCA10', 'ENST00000522406.5_1_17:67144970-67178294:-|nuORF', 'ENST00000519732.5_1_17:67144970-67171813:-|nuORF'] 113401 23996 TQLLFLKA True NCI_RA007_Epitope_Rep3 932.5695033004799 932.56840993586 103.95 2 -1.3984734805277934 0.3948936473269395 1.0 ['nc|ENSG00000014123|O94874-3|UFL1', 'ENSG00000014123|ENST00000369278|UFL1', 'nc|ENSG00000014123|O94874-2|UFL1'] 90149 24402 RHCAGLQD True H1975_Epitope_Rep3 898.4079343619799 898.40682993586 101.59 2 -1.3985039343361738 0.3948936473269395 1.0 ['ENST00000378322.7_1_1:3547541-3547814:-|nuORF'] 62637 18780 LLVQVRLSP True PC9_epitope_Rep1 1023.6440652230699 1023.6429699358599 77.021 2 -1.3985225711670555 0.3948936473269395 1.0 ['ENST00000588000.5_1_19:46124203-46142634:-|nuORF'] 93406 16659 RRWWWLQRRQA True H1975_Epitope_Rep3 1640.89128040008 1640.89018993586 69.595 2 -1.3985328808551707 0.3948936473269395 1.0 ['ENST00000591247.5_1_17:42113394-42113565:-|nuORF'] 58836 16291 LFRLMTQYFWE True NCI_RA007_Epitope_Rep2 1532.7486069445997 1532.74750993586 68.096 2 -1.398533963453744 0.3948936473269395 1.0 ['SCN1A|p.D382Y|1|0.21|ENSG00000144285|chr2:166047653-166047653|C/A|missense_variant'] 135162 18798 YARWQSRWRKK True PC9_epitope_Rep1 1563.8534979090298 1563.8524099358601 77.094 2 -1.3985886267248857 0.3948936473269395 1.0 ['nc|ENSG00000196557|O95180-2|CACNA1H', 'ENSG00000196557|ENST00000348261|CACNA1H'] 55158 12052 LANLSNPQL True PC9_epitope_Rep5 968.5290950404799 968.52798993586 51.352 2 -1.3985956871384837 0.3948936473269395 1.0 ['nc|ENSG00000008838|O75448-2|MED24', 'ENSG00000008838|ENST00000394128|MED24', 'ENST00000585249.1_1_17:38189391-38189818:-|nuORF'] 106524 11779 SVVRVDSVP True PC9_epitope_Rep4 956.5290950404799 956.52798993586 53.074 2 -1.3987136519556063 0.3949080118694362 1.0 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant', 'ARID2|p.G803Afs*19|1|0.12|ENSG00000189079|chr12:45850530-45850530|G/-|frameshift_variant'] 62223 21286 LLPTLVPGV True PC9_epitope_Rep3 907.5742543277498 907.57314993586 87.171 2 -1.3987232193794312 0.3949080118694362 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.K736Rfs*16|1|0.7|ENSG00000176927|chr17:30055895-30055895|A/-|frameshift_variant'] 60695 12632 LIWKVPVSRQ True H1975_Epitope_Rep1 1224.7342772097998 1224.73318993586 53.64 2 -1.3987972449918482 0.39493893247557893 1.0 ['ENSG00000133800|ENST00000256178|LYVE1'] 101651 7005 SPFPIYAWGFV True H1975_Epitope_Rep1 1282.63864548946 1282.63754993586 31.979 2 -1.3988500855060475 0.39495329543161667 1.0 ['ENST00000548897.1_2_12:104322314-104323808:-|nuORF'] 72318 13180 MSMRIPVDE True NCI_RA007_Epitope_Rep4 1076.49945178832 1076.49834993586 57.807 2 -1.3988609711782936 0.39495329543161667 1.0 ['nc|ENSG00000145730|P19021-6|PAM', 'nc|ENSG00000145730|P19021-2|PAM', 'ENSG00000145730|ENST00000438793|PAM', 'nc|ENSG00000145730|P19021-5|PAM', 'nc|ENSG00000145730|P19021-4|PAM', 'nc|ENSG00000145730|P19021-3|PAM'] 135209 18962 YAVLYTLY True PC9_epitope_Rep3 1004.52188440172 1004.52078993586 78.162 2 -1.3989747670098318 0.3949557889739481 1.0 ['ENSG00000157106|ENST00000446231|SMG1', 'nc|ENSG00000157106|Q96Q15-2|SMG1', 'nc|ENSG00000157106|Q96Q15-3|SMG1', 'ENST00000566127.1_1_16:29552630-29552998:-|nuORF', 'ENST00000523028.5_1_16:21892164-21910369:-|nuORF', 'ENST00000309865.11_1_16:22482951-22501641:+|nuORF'] 84397 9349 QGEPQLPQAVQ True NCI_RA007_Epitope_Rep3 1193.6040508858898 1193.6029499358601 43.867 2 -1.3989887236027476 0.3949557889739481 1.0 ['ENST00000368875.6_2_1:151298654-151299818:-|nuORF'] 122400 9782 VGSGLAGREL True PC9_epitope_Rep3 957.52434401321 957.52324993586 42.581 2 -1.399002637120368 0.39496296999620206 1.0 ['ENSG00000156959|ENST00000287585|LHFPL4'] 122511 8611 VGSSLEQWLSC True H1975_Epitope_Rep2 1207.55432381215 1207.5532299358601 38.078 2 -1.3990936873531963 0.3950057561982981 1.0 ['nc|ENSG00000095596|O43174-2|CYP26A1', 'ENSG00000095596|ENST00000224356|CYP26A1'] 86159 13623 QPSLTWMLMV True PC9_epitope_Rep5 1204.5984375536 1204.5967949037902 57.424 3 -1.399153484701314 0.3950201165454135 1.0 ['nc|ENSG00000169344|P07911-2|UMOD', 'UMOD|p.M574Nfs*3|1|0.27|ENSG00000169344|chr16:20337310-20337311|-/T|frameshift_variant', 'nc|ENSG00000169344|P07911-3|UMOD', 'nc|ENSG00000169344|P07911-4|UMOD', 'ENSG00000169344|ENST00000396138|UMOD', 'nc|ENSG00000169344|P07911-5|UMOD'] 56015 13457 LDKDRYQL True PC9_epitope_Rep5 1049.55055876105 1049.54946993586 56.779 2 -1.3991620932675717 0.3950201165454135 1.0 ['ENST00000452439.1_1_19:50017588-50028245:+|nuORF'] 125857 13443 VNQTNKRDY True H1975_Epitope_Rep1 1136.55743504664 1136.55632993586 56.822 2 -1.399293805670154 0.3950391644908616 1.0 ['ENSG00000138646|ENST00000264350|HERC5', 'ENST00000510223.5_1_4:89394995-89425581:+|nuORF', 'ENST00000502913.1_1_4:89394186-89425581:+|nuORF'] 120096 13015 VFHPVMFDKC True PC9_epitope_Rep2 1221.56747177849 1221.5663699358602 55.346 2 -1.399300439838767 0.3950416557878996 1.0 ['ENSG00000151503|ENST00000534548|NCAPD3', 'NCAPD3|p.V624Wfs*5|1|0.29|ENSG00000151503|chr11:134192864-134192864|C/-|frameshift_variant'] 94373 13027 RYDEGTLFS True H1975_Epitope_Rep3 1086.4981888350198 1086.49708993586 55.345 2 -1.3993222186438967 0.3950416557878996 1.0 ['ENSG00000163618|ENST00000383710|CADPS', 'nc|ENSG00000163618|Q9ULU8-4|CADPS', 'nc|ENSG00000163618|Q9ULU8-2|CADPS', 'nc|ENSG00000163618|Q9ULU8-3|CADPS'] 65520 4797 LSFYFFFFFFE True NCI_RA007_Epitope_Rep2 1539.7114760765496 1539.70929987172 23.29 4 -1.3993575986060043 0.3950488351945694 1.0 ['ENST00000538582.5_1_12:21590984-21591200:+|nuORF'] 90761 23517 RKRKTRHSIN True PC9_epitope_Rep3 1294.7694339318998 1294.76832993586 95.739 2 -1.3994167733401353 0.3950678818949967 1.0 ['LARP1B|p.T643I|1|0.29|ENSG00000138709|chr4:128179437-128179437|C/T|missense_variant'] 19632 23370 ELRRERERERE True PC9_epitope_Rep3 1556.81314921868 1556.8120499358602 95.173 2 -1.3994219269092247 0.395075060820032 1.0 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'GSE1|p.P829Lfs*26|1|0.21|ENSG00000131149|chr16:85663456-85663457|CC/T|frameshift_variant', 'GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 29515 25685 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 108.67 3 -1.3995502200164318 0.39509190805634337 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 107938 4595 TAWYWYQNRHI True NCI_RA007_Epitope_Rep4 1536.7262317072398 1536.7245749037902 24.084 3 -1.3996399579320373 0.39509190805634337 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|123|2|sense'] 121039 24851 VGFKISKVIV True NCI_RA007_Epitope_Rep1 1088.6957664427598 1088.69466993586 102.87 2 -1.3996710994837311 0.39509190805634337 1.0 ['nc|ENSG00000109113|Q9BZG1-2|RAB34', 'ENSG00000109113|ENST00000395245|RAB34'] 57761 10050 LENSLREVEVR True H1975_Epitope_Rep1 1342.7204776204599 1342.7193899358601 43.596 2 -1.3996816033886497 0.39509190805634337 1.0 ['CON__H-INV:HIT000015463', 'ENST00000425245.1_1_1:214706446-214706704:+|nuORF'] 9277 20198 AVRGYYHCYSP True PC9_epitope_Rep4 1314.5815416195 1314.58044993586 85.829 2 -1.399686960175713 0.3950921992548117 1.0 ['ENSG00000175267|ENST00000389398|VWA3A', 'VWA3A|p.P1114Lfs*14|1|0.24|ENSG00000175267|chr16:22152568-22152568|C/-|frameshift_variant'] 59253 11532 LGGPNPGSRGL True PC9_epitope_Rep4 1023.5461420869499 1023.54504993586 52.121 2 -1.399754523796365 0.3950921992548117 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 122361 17639 VGSDPVLM True NCI_RA007_Epitope_Rep5 816.40514039732 816.40459496793 74.632 1 -1.3997779115699662 0.3950921992548117 1.0 ['nc|ENSG00000114423|Q13191-3|CBLB', 'nc|ENSG00000114423|Q13191-2|CBLB', 'ENSG00000114423|ENST00000394030|CBLB'] 58348 16093 LEVARTSL True PC9_epitope_Rep1 887.50763131991 887.50652993586 66.718 2 -1.399796624548524 0.3950921992548117 1.0 ['nc|ENSG00000263528|Q14164-2|IKBKE', 'ENSG00000263528|ENST00000581977|IKBKE'] 5396 4169 ALVNINPFTPE True NCI_RA007_Epitope_Rep5 1213.63428838501 1213.63264490379 22.557 3 -1.3998273655851268 0.3950921992548117 1.0 ['ENSG00000214102|ENST00000397541|WEE2'] 38038 12194 HEKNNLAD True PC9_epitope_Rep5 939.4410083120699 939.43990993586 51.895 2 -1.3998590278823386 0.3950993770394542 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 35688 14766 GTNYRHLFKVF True H1975_Epitope_Rep2 1380.7302544585198 1380.72914993586 61.956 2 -1.3998728657927535 0.3951184204281171 1.0 ['ENSG00000108405|ENST00000225538|P2RX1'] 20523 17977 EPWLNCDP True H1975_Epitope_Rep2 972.4011176460399 972.4005649679301 74.474 1 -1.3999417490549069 0.39512559773129086 1.0 ['ENSG00000122126|ENST00000371113|OCRL', 'nc|ENSG00000122126|Q01968-2|OCRL', 'OCRL|p.L258I|1|0.29|ENSG00000122126|chrX:129560599-129560599|T/A|missense_variant'] 121222 15930 VGGPNGGK True NCI_RA007_Epitope_Rep4 684.35548778296 684.35493496793 69.143 1 -1.3999556354868916 0.3951327748641401 1.0 ['ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1'] 137835 19326 YPGAGAGG True NCI_RA007_Epitope_Rep3 648.2867395167999 648.2861949679301 84.372 1 -1.399997908862519 0.39513306360713313 1.0 ['ENST00000394412.7_1_15:90185548-90188335:-|nuORF'] 5980 17786 APLAGLEK True PC9_epitope_Rep2 797.46470387877 797.4641549679301 73.703 1 -1.400014115096155 0.39513306360713313 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1'] 45059 9484 IQQEMDLLRF True NCI_RA007_Epitope_Rep2 1291.6594575870297 1291.65836993586 41.504 2 -1.400054589752081 0.39513306360713313 1.0 ['ENST00000419977.4_1_6:57182469-57246993:+|nuORF', 'ENSG00000146143|ENST00000615550|PRIM2', 'nc|ENSG00000146143|P49643-2|PRIM2', 'PRIM2-NKAIN2|1|fusion', 'PRIM2-NKAIN2|2|fusion'] 109115 1547 TFHLPYCGPKQ True PC9_epitope_Rep3 1289.62267815549 1289.6210249037902 8.5166 3 -1.4000682835280074 0.39513306360713313 1.0 ['OR10G7|p.N171K|2|0.06|ENSG00000182634|chr11:124038489-124038489|G/C|missense_variant'] 107014 8429 SYLLKMQQKLQ True NCI_RA007_Epitope_Rep4 1378.7642570087398 1378.7626049037901 39.236 3 -1.4000940237918982 0.39513306360713313 1.0 ['ENSG00000170160|ENST00000399273|CCDC144A', 'nc|ENSG00000266302|A2RUR9|CCDC144A', 'nc|ENSG00000154898|Q8IYA2|CCDC144CP'] 96708 6820 SEQCAYITSW True H1975_Epitope_Rep2 1186.49647458286 1186.49482490379 31.152 3 -1.400182991136583 0.39513832866701465 1.0 ['ENST00000371711.4_1_20:48251667-48252051:-|nuORF'] 62792 2770 LMEEINEDEP True H1975_Epitope_Rep2 1217.51218421665 1217.5105349037901 14.685 3 -1.400204855722222 0.39513832866701465 1.0 ['ENST00000507175.5_1_5:145826912-145859658:+|nuORF', 'nc|ENSG00000113649|O14776-2|TCERG1', 'nc|ENSG00000113649|O14776|TCERG1', 'ENSG00000113649|ENST00000679501|TCERG1'] 8392 6065 ATPQCQINQ True PC9_epitope_Rep6 1001.46002950449 1001.4589299358599 31.705 2 -1.4002089713579635 0.39513832866701465 1.0 ['nc|ENSG00000144837|Q53H76-4|PLA1A', 'nc|ENSG00000144837|Q53H76-3|PLA1A', 'ENSG00000144837|ENST00000273371|PLA1A'] 111254 17791 TLGQIYYLKRF True PC9_epitope_Rep5 1400.7816213250396 1400.7799649037902 73.45 3 -1.4002327169302475 0.39513832866701465 1.0 ['ENST00000543425.1_1_12:124075023-124081273:+|nuORF', 'ENSG00000086598|ENST00000262225|TMED2'] 42756 16256 IFFFFFFWDR True NCI_RA007_Epitope_Rep1 1470.7124791360598 1470.71138993586 67.341 2 -1.4002837980727212 0.39513832866701465 1.0 ['ENST00000267205.6_1_12:122216327-122216612:-|nuORF'] 37552 8782 GYPGRQGL True PC9_epitope_Rep5 846.4348007328199 846.43370993586 38.722 2 -1.4002911856766251 0.39513832866701465 1.0 ['nc|ENSG00000171502|Q17RW2-2|COL24A1', 'ENSG00000171502|ENST00000370571|COL24A1', 'ENSG00000196739|ENST00000356083|COL27A1'] 30285 20792 GAAQAPWP True NCI_RA007_Epitope_Rep3 796.3867879112399 796.38568993586 90.545 2 -1.4003395211196195 0.39513832866701465 1.0 ['CCDC61|p.G102Afs*19|1|0.29|ENSG00000104983|chr19:46006627-46006627|G/-|frameshift_variant'] 131526 15490 VVVGKLLVL True PC9_epitope_Rep6 938.6528390016199 938.65174993586 71.759 2 -1.4003436699790015 0.39513832866701465 1.0 ['ENST00000495440.1_1_3:196439919-196444680:+|nuORF'] 55542 16133 LAYHRKPI True PC9_epitope_Rep6 996.5868847001199 996.58578993586 74.399 2 -1.4003844730650037 0.39513832866701465 1.0 ['ENSG00000110975|ENST00000228567|SYT10'] 28019 27801 FQYPLAAP True PC9_epitope_Rep5 905.4647038787698 905.46360993586 114.5 2 -1.400474308948529 0.3951457923082398 1.0 ['ENST00000266643.5_1_12:58152865-58153108:+|nuORF'] 47021 13935 IVRHFYYSNRC True NCI_RA007_Epitope_Rep2 1456.70338808768 1456.70228993586 58.859 2 -1.4004807580961887 0.3951457923082398 1.0 ['nc|ENSG00000156374|Q9BYE7-3|PCGF6', 'ENSG00000156374|ENST00000369847|PCGF6'] 29486 24613 FVIFMFFLN True H1975_Epitope_Rep1 1176.6041745570399 1176.60253490379 101.98 3 -1.4005032695977222 0.3951457923082398 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 23168 7267 EVPCARQPV True NCI_RA007_Epitope_Rep1 997.50150039365 997.50040993586 32.258 2 -1.400522168749005 0.3951457923082398 1.0 ['ENST00000436179.1_3_7:39663639-39663861:+|nuORF'] 45279 7178 ISAEDMELRWY True H1975_Epitope_Rep1 1411.64420144571 1411.6431099358601 32.631 2 -1.4005391530151694 0.3951457923082398 1.0 ['nc|ENSG00000215811|A8MVZ5|BTNL10P'] 79645 21985 PHGAPHSD True H1975_Epitope_Rep2 816.3514650316802 816.35036993586 90.891 2 -1.4005494044428846 0.3951457923082398 1.0 ['nc|ENSG00000248290|Q16473|TNXA'] 90303 25138 RHWLGWIYA True PC9_epitope_Rep2 1200.6192474575598 1200.61759490379 102.36 3 -1.4006198724197845 0.3951648299505332 1.0 ['ENST00000431308.5_1_17:28935452-28937957:+|nuORF'] 81340 16575 PPRQSQVPRL True NCI_RA007_Epitope_Rep5 1176.6727395823998 1176.6716499358602 70.514 2 -1.400686703246585 0.3951698041588081 1.0 ['ENST00000487506.1_1_20:36841446-36845915:-|nuORF', 'ENSG00000149633|ENST00000279024|KIAA1755', 'ENST00000460881.5_1_20:36841446-36845354:-|nuORF'] 35277 8022 GSPALQNLYRL True PC9_epitope_Rep2 1230.67207087606 1230.67042490379 36.217 3 -1.400717718723139 0.3951698041588081 1.0 ['ENST00000464684.5_1_15:91434747-91438785:+|nuORF'] 61660 7481 LLHLLCRQK True NCI_RA007_Epitope_Rep4 1122.66956877826 1122.6679349037902 35.421 3 -1.4007232538186567 0.3951698041588081 1.0 ['ENST00000443526.5_1_7:99950215-99952796:+|nuORF'] 124467 5150 VLEYDWRNY True PC9_epitope_Rep5 1256.5825871653199 1256.5814899358602 24.831 2 -1.4007325454862578 0.3951698041588081 1.0 ['chr3:58831889-58842147|288|17.03|0.08|7.65|-|0|CFAP20DC,None|1'] 32398 10585 GGGGGAGKP True NCI_RA007_Epitope_Rep3 656.3241876546799 656.32363496793 48.686 1 -1.4007578080781533 0.3951888403871702 1.0 ['ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L'] 19622 22887 ELRQLRRRWFH True PC9_epitope_Rep3 1595.89094604691 1595.8898499358602 93.301 2 -1.4007844305923156 0.39519601447126507 1.0 ['ENSG00000179314|ENST00000317744|WSCD1'] 4874 8308 ALGAPVDRYFL True H1975_Epitope_Rep1 1220.65535818276 1220.6542699358602 36.888 2 -1.4008313768537362 0.3952031883851683 1.0 ['ENST00000529654.5_1_8:145616841-145618286:+|nuORF', 'ENSG00000173137|ENST00000308860|ADCK5'] 129036 12459 VTAFQGKGHSL True PC9_epitope_Rep6 1143.6036569630699 1143.60254993586 59.349 2 -1.400884602212095 0.3952103621288861 1.0 ['ENSG00000175073|ENST00000310421|VCPIP1'] 120467 25595 VFVFVKKLREE True NCI_RA007_Epitope_Rep5 1392.8129214533199 1392.81182993586 105.99 2 -1.4009320812386563 0.39521753570242446 1.0 ['ENST00000370654.5_1_1:84961112-84961604:+|nuORF'] 48123 2008 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 10.778 3 -1.4011032354882371 0.3952509162505486 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 58242 13316 LESYRKKI True PC9_epitope_Rep5 1035.6076797143498 1035.60658993586 56.232 2 -1.4011191597315442 0.3952509162505486 1.0 ['ENST00000473067.1_1_2:37315561-37321362:+|nuORF', 'nc|ENSG00000152133|Q8N954-2|GPATCH11', 'ENSG00000152133|ENST00000674370|GPATCH11', 'nc|ENSG00000152133|Q8N954|GPATCH11'] 80194 22980 PLAFWRKQL True PC9_epitope_Rep3 1157.6709486772497 1157.6698499358602 93.659 2 -1.4011834683404911 0.3952509162505486 1.0 ['ENSG00000137875|ENST00000260442|BCL2L10'] 80342 17081 PLGAVRRS True NCI_RA007_Epitope_Rep5 854.50863437942 854.50752993586 72.47 2 -1.401190128029768 0.39525808900275167 1.0 ['ENST00000379982.7_1_5:95067096-95067162:+|nuORF'] 36884 22467 GVQNITAA True PC9_epitope_Rep2 772.40791727864 772.4073649679301 91.908 1 -1.4011997612973033 0.39526526158480896 1.0 ['nc|ENSG00000101251|Q5TEA6-2|SEL1L2', 'ENSG00000101251|ENST00000284951|SEL1L2'] 120885 5373 VGDVLQTH True PC9_epitope_Rep1 867.4450310633501 867.44392993586 25.503 2 -1.4013597120634071 0.39527960623851033 1.0 ['ENST00000525402.5_1_11:67275470-67275692:-|nuORF', 'ENST00000301488.7_1_11:67275099-67275692:-|nuORF'] 33579 11460 GLKVNQPASFD True NCI_RA007_Epitope_Rep2 1174.5982372294598 1174.5971499358602 49.17 2 -1.4013753104669842 0.39527960623851033 1.0 ['FLNC|p.A2430D|1|0.12|ENSG00000128591|chr7:128856555-128856555|C/A|missense_variant'] 65233 7148 LSEEDRVV True H1975_Epitope_Rep3 945.4767251144499 945.47562993586 32.467 2 -1.4014707675764235 0.3952986384553347 1.0 ['ENSG00000141759|ENST00000269601|TXNL4A'] 76503 5652 NTDHVMKRECH True H1975_Epitope_Rep3 1368.60268807024 1368.6015899358601 26.771 2 -1.4015280691009604 0.39530388378298253 1.0 ['ENST00000537192.1_1_12:5487329-5487425:+|nuORF'] 44364 3993 IMYYLTPQWDK True NCI_RA007_Epitope_Rep2 1456.7060734262798 1456.7044349037901 20.168 3 -1.4016851820182068 0.39530388378298253 1.0 ['ENSG00000196517|ENST00000372310|SLC6A9', 'nc|ENSG00000196517|P48067-3|SLC6A9', 'nc|ENSG00000196517|P48067|SLC6A9'] 131041 3575 VVLLRLKL True PC9_epitope_Rep1 952.6797224558 952.67862993586 18.676 2 -1.4016943660262575 0.39530388378298253 1.0 ['ENSG00000162944|ENST00000295049|RFTN2'] 109160 24059 TFPVKGLK True NCI_RA007_Epitope_Rep3 888.5432885526399 888.54218993586 104.19 2 -1.401707666594141 0.39530388378298253 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000608689.5_2_20:39801092-39811607:+|nuORF'] 57762 11419 LENSQRVTTAL True H1975_Epitope_Rep1 1230.65681473474 1230.6557099358602 48.903 2 -1.401717448120098 0.39530388378298253 1.0 ['ENSG00000006282|ENST00000006658|SPATA20', 'nc|ENSG00000006282|Q8TB22-3|SPATA20', 'nc|ENSG00000006282|Q8TB22|SPATA20', 'nc|ENSG00000006282|Q8TB22-4|SPATA20', 'ENST00000503063.5_1_17:48625445-48628667:+|nuORF'] 136308 24882 YGWQLTLLLL True NCI_RA007_Epitope_Rep1 1218.7012457460198 1218.69961490379 102.99 3 -1.401752500856758 0.39530388378298253 1.0 ['ABCB1|p.G1114Afs*33|1|0.14|ENSG00000085563|chr7:87509423-87509423|C/-|frameshift_variant', 'ENSG00000085563|ENST00000622132|ABCB1', 'nc|ENSG00000085563|P08183-2|ABCB1', 'ENST00000488737.6_1_7:87133561-87160896:-|nuORF', 'nc|ENSG00000005471|P21439-3|ABCB4', 'ENSG00000005471|ENST00000649586|ABCB4', 'nc|ENSG00000005471|P21439|ABCB4'] 62344 17580 LLRKLEDGVP True PC9_epitope_Rep3 1138.6710082468999 1138.66990993586 72.809 2 -1.4017609704897933 0.39530388378298253 1.0 ['ENST00000490470.5_1_3:133380862-133407125:+|nuORF'] 122030 12303 VGQNELKI True PC9_epitope_Rep6 899.5076313199098 899.50652993586 58.715 2 -1.401772610963641 0.39530388378298253 1.0 ['nc|ENSG00000104218|Q1MSJ5-1|CSPP1', 'ENSG00000104218|ENST00000678616|CSPP1', 'nc|ENSG00000104218|Q1MSJ5|CSPP1', 'nc|ENSG00000104218|Q1MSJ5-2|CSPP1'] 20870 8021 EQRKSEYFELK True H1975_Epitope_Rep1 1455.73579333143 1455.7346899358602 35.797 2 -1.4017754272680014 0.39530388378298253 1.0 ['ENSG00000179542|ENST00000356928|SLITRK4'] 11284 11142 DESFANVLK True H1975_Epitope_Rep3 1021.5080252427299 1021.5074749679301 47.955 1 -1.4019095357429574 0.3953088498618506 1.0 ['ERICH3|p.E666A|1|0.37|ENSG00000178965|chr1:74589810-74589810|T/G|missense_variant'] 19225 8844 ELKSGSGP True PC9_epitope_Rep3 773.3919328613299 773.39082993586 38.971 2 -1.401912686585914 0.3953088498618506 1.0 ['ENSG00000197471|ENST00000652691|SPN'] 32611 14750 GHFCLCPL True NCI_RA007_Epitope_Rep3 888.39861554824 888.39750993586 65.431 2 -1.4019166963236924 0.3953088498618506 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 126853 5720 VPTIEGMRM True PC9_epitope_Rep6 1032.5096225492 1032.50852993586 30.151 2 -1.4019406027529693 0.3953088498618506 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.R2720Qfs*63|1|0.51|ENSG00000168477|chr6:32061470-32061471|GC/-|frameshift_variant', 'TNXB|p.P3212Lfs*4|1|0.45|ENSG00000168477|chr6:32052891-32052891|G/-|frameshift_variant', 'TNXB|p.T3316Qfs*58|1|0.15|ENSG00000168477|chr6:32050233-32050233|C/-|frameshift_variant', 'TNXB|p.G3470Afs*51|1|0.22|ENSG00000168477|chr6:32049359-32049359|C/-|frameshift_variant', 'TNXB|p.A1701Pfs*4|1|0.19|ENSG00000168477|chr6:32079049-32079049|G/-|frameshift_variant'] 3652 5831 AGQPAVDQ True NCI_RA007_Epitope_Rep2 784.37153176992 784.3709849679301 27.299 1 -1.4019974614020134 0.39532595034266876 1.0 ['nc|ENSG00000175832|P43268-2|ETV4', 'ENSG00000175832|ENST00000319349|ETV4'] 13510 7215 DPGDVWKPIP True NCI_RA007_Epitope_Rep2 1122.57095985246 1122.5698699358602 32.684 2 -1.402033163181459 0.39532595034266876 1.0 ['ENST00000490025.5_2_6:26392873-26392921:+|nuORF'] 124877 23400 VLLLVPPLIKP True H1975_Epitope_Rep2 1200.8209669558798 1200.8198699358602 96.472 2 -1.4020535505784653 0.39532595034266876 1.0 ['OR51A2|p.M288I|1|0.65|ENSG00000205496|chr11:4954850-4954850|C/T|missense_variant'] 65008 12591 LSDIFLIYL True H1975_Epitope_Rep3 1095.62159844299 1095.6205099358601 53.634 2 -1.402061757219514 0.39532595034266876 1.0 ['ENST00000570088.1_1_16:85936621-85936909:+|nuORF'] 67295 9505 LTDPFLERITE True H1975_Epitope_Rep1 1332.6925315371197 1332.69142993586 41.481 2 -1.4020738729615239 0.39532595034266876 1.0 ['ENSG00000197275|ENST00000336148|RAD54B'] 9389 7820 AVVGGGESLWE True NCI_RA007_Epitope_Rep1 1102.5294889632999 1102.52838993586 34.409 2 -1.4020833623157105 0.39532595034266876 1.0 ['ENST00000557600.5_1_14:94547684-94567230:+|nuORF'] 98669 6819 SIQFERAL True PC9_epitope_Rep2 962.5185303567798 962.51742993586 31.634 2 -1.402099770379974 0.39532595034266876 1.0 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT', 'nc|ENSG00000124155|Q969N2-3|PIGT', 'nc|ENSG00000124155|Q969N2-4|PIGT', 'nc|ENSG00000124155|Q969N2-2|PIGT'] 41741 13210 IDNYAFRL True PC9_epitope_Rep1 1010.5185303567799 1010.51742993586 55.676 2 -1.4021152499546534 0.39532595034266876 1.0 ['PHKG2|p.C353Y|1|0.13|ENSG00000156873|chr16:30756934-30756934|G/A|missense_variant'] 131044 3513 VVLLRLKL True PC9_epitope_Rep3 952.6797224558 952.67862993586 18.636 2 -1.4021216887353238 0.39532595034266876 1.0 ['ENSG00000162944|ENST00000295049|RFTN2'] 114964 24506 TTILLLKLL True NCI_RA007_Epitope_Rep1 1026.7052684972998 1026.70467496793 101.52 1 -1.4022718158935197 0.3953686906413403 1.0 ['ENST00000317025.12_1_8:38131368-38131458:-|nuORF'] 9603 20525 AYELKIANKL True PC9_epitope_Rep5 1161.6757592741699 1161.67466993586 83.991 2 -1.4023632824471293 0.39537420127322087 1.0 ['nc|ENSG00000057149|P29508-2|SERPINB3', 'ENSG00000206073|ENST00000341074|SERPINB4', 'ENSG00000057149|ENST00000283752|SERPINB3', 'SERPINB3|p.S320Afs*30|1|0.34|ENSG00000057149|chr18:63655873-63655873|C/-|frameshift_variant'] 29510 25280 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 106.57 3 -1.4023652011813503 0.39537420127322087 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 115616 17157 TVIQRAYRRYR True NCI_RA007_Epitope_Rep2 1480.8375134917198 1480.83640993586 71.476 2 -1.4023698583095363 0.39537420127322087 1.0 ['nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A'] 115535 15466 TVGYIRENI True PC9_epitope_Rep3 1063.56620882519 1063.5651099358602 64.642 2 -1.4024075927560606 0.39537420127322087 1.0 ['ENSG00000145703|ENST00000274364|IQGAP2'] 23014 15254 EVIYTLLGLM True PC9_epitope_Rep5 1150.6307832276998 1150.6296899358601 63.684 2 -1.4024087059071495 0.39537420127322087 1.0 ['ENSG00000149292|ENST00000529221|TTC12', 'nc|ENSG00000149292|Q9H892-2|TTC12'] 48920 18632 KEWAKWTKEEL True PC9_epitope_Rep5 1446.7507151195798 1446.7490549037902 76.693 3 -1.4024137687742722 0.39537420127322087 1.0 ['nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1', 'CAMTA1|p.F1590Ifs*19|1|0.24|ENSG00000171735|chr1:7751268-7751269|-/A|frameshift_variant', 'ENSG00000171735|ENST00000303635|CAMTA1'] 77654 11934 NYYSTLSFT True PC9_epitope_Rep5 1094.49204082542 1094.49094993586 50.901 2 -1.4025897378835461 0.39537420127322087 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 51866 22462 KKNASQKRRS True PC9_epitope_Rep4 1201.7003513125699 1201.69924993586 94.632 2 -1.4025928787422755 0.39537420127322087 1.0 ['ENSG00000106617|ENST00000287878|PRKAG2', 'ENST00000474383.1_1_7:151534428-151573717:-|nuORF', 'ENST00000481434.5_1_7:151372433-151573717:-|nuORF'] 99049 21396 SKTSGKAK True PC9_epitope_Rep5 805.4657665079299 805.46466993586 87.361 2 -1.4027082537818667 0.39537420127322087 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 37123 5057 GVSWYKGDT True PC9_epitope_Rep5 1011.4661604307498 1011.46506993586 24.479 2 -1.4027529140821873 0.39537420127322087 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant'] 15546 5281 EASKVLLC True PC9_epitope_Rep1 861.4629896266099 861.46188993586 25.157 2 -1.4027547504067177 0.39537420127322087 1.0 ['nc|ENSG00000173848|Q7Z628-2|NET1', 'ENSG00000173848|ENST00000355029|NET1', 'ENST00000484741.1_1_10:5496419-5498268:+|nuORF'] 81879 22481 PSLFAPQHPVM True PC9_epitope_Rep4 1222.61686449906 1222.61521490379 94.705 3 -1.402774561802953 0.39537420127322087 1.0 ['ENST00000376511.6_1_6:30574014-30574328:-|nuORF'] 109141 16431 TFLGTIRTV True PC9_epitope_Rep5 1006.58113061334 1006.58002993586 68.201 2 -1.4029332871499771 0.39537420127322087 1.0 ['ENST00000575369.5_1_17:6662992-6674357:+|nuORF'] 124658 15904 VLIHLLML True H1975_Epitope_Rep2 950.59869525378 950.59758993586 66.376 2 -1.4029574440460861 0.39537420127322087 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32875160-32883832:+|nuORF'] 9211 22031 AVPLVPLT True H1975_Epitope_Rep1 808.50584041476 808.50474993586 91.641 2 -1.4031040339803649 0.39539322379495934 1.0 ['nc|ENSG00000111602|Q9UNS1-2|TIMELESS', 'ENSG00000111602|ENST00000553532|TIMELESS'] 13005 4965 DLQKFFCDFVT True PC9_epitope_Rep3 1361.6325741328499 1361.63092490379 24.192 3 -1.4032778799890526 0.39539570392147566 1.0 ['nc|ENSG00000153789|Q6ZTR7|CIBAR2', 'ENSG00000153789|ENST00000539556|CIBAR2'] 28645 24376 FSSFTDHP True H1975_Epitope_Rep1 936.39774651776 936.39664993586 101.08 2 -1.403278564891778 0.39539570392147566 1.0 ['ENST00000357700.10_1_10:5681946-5682531:-|nuORF'] 137435 23453 YLMNLRKSGTL True PC9_epitope_Rep1 1294.7067421326199 1294.70564993586 94.996 2 -1.4033300021445223 0.39540287113102646 1.0 ['nc|ENSG00000285130|Q16595-2|FXN', 'ENST00000411625.2_1_9:127730575-127731109:-|nuORF', 'nc|ENSG00000285130|Q16595-3|FXN', 'ENSG00000165060|ENST00000484259|FXN'] 60724 1688 LKAKKPQKRKP True H1975_Epitope_Rep2 1320.8717737421198 1320.8701349037901 9.0986 3 -1.403379615006894 0.39541058221126496 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 59650 6946 LGSPLPRAK True H1975_Epitope_Rep3 937.5709002828099 937.56980993586 31.679 2 -1.4034142009514812 0.39541058221126496 1.0 ['ENSG00000065717|ENST00000262953|TLE2', 'nc|ENSG00000065717|Q04725-3|TLE2', 'nc|ENSG00000065717|Q04725-2|TLE2'] 12358 11738 DIWYMRFSMDL True H1975_Epitope_Rep3 1475.6577433348698 1475.65664993586 50.293 2 -1.403423913621125 0.39541058221126496 1.0 ['EED|p.F372L|1|0.3|ENSG00000074266|chr11:86277129-86277129|C/A|missense_variant'] 2869 5419 AEYLEVYW True PC9_epitope_Rep5 1071.49131254943 1071.49020993586 25.856 2 -1.403441215874854 0.39541058221126496 1.0 ['ENST00000548860.5_1_12:49218876-49221679:+|nuORF', 'nc|ENSG00000167535|P54284-5|CACNB3', 'nc|ENSG00000167535|P54284-2|CACNB3', 'nc|ENSG00000167535|P54284-3|CACNB3', 'nc|ENSG00000167535|P54284-4|CACNB3', 'ENSG00000167535|ENST00000301050|CACNB3'] 91720 18507 RPHRCEATAT True NCI_RA007_Epitope_Rep5 1140.5458248171199 1140.54418490379 78.014 3 -1.4034903190448325 0.39541058221126496 1.0 ['ENSG00000205639|ENST00000338315|MFSD2B'] 83661 6812 QEAHWVLCEVL True H1975_Epitope_Rep1 1325.6438075228898 1325.64270993586 31.245 2 -1.4035029057976292 0.39541058221126496 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 45280 11177 ISAEDMELRWY True NCI_RA007_Epitope_Rep1 1411.64420144571 1411.6431099358601 47.475 2 -1.4035847894390914 0.39541058221126496 1.0 ['nc|ENSG00000215811|A8MVZ5|BTNL10P'] 85816 25129 QMAFQILLRKK True NCI_RA007_Epitope_Rep5 1374.8169612879394 1374.81532490379 104.16 3 -1.4036022817701603 0.39541058221126496 1.0 ['ENSG00000105877|ENST00000409508|DNAH11'] 58030 11122 LERGFSVKYS True PC9_epitope_Rep5 1184.61897267404 1184.6178699358602 47.77 2 -1.4036818467234131 0.39541058221126496 1.0 ['nc|ENSG00000139292|O75473-3|LGR5', 'nc|ENSG00000139292|O75473-2|LGR5', 'ENSG00000139292|ENST00000266674|LGR5'] 109466 4959 TGVKTRAQ True PC9_epitope_Rep5 859.4875645816699 859.48646993586 24.11 2 -1.4036931281762084 0.39541058221126496 1.0 ['nc|ENSG00000213995|Q8IW45-2|NAXD'] 11049 7635 DDNGDDDDDFF True PC9_epitope_Rep5 1288.4003848381997 1288.39928993586 34.314 2 -1.403694095222682 0.39541058221126496 1.0 ['WASHC2C|p.D455N|1|0.19|ENSG00000172661|chr10:45755058-45755058|G/A|missense_variant'] 30450 20484 GAGDLGGF True NCI_RA007_Epitope_Rep5 692.31295426464 692.3124049679301 85.737 1 -1.4037917359875938 0.3954373074188196 1.0 ['ENST00000246672.3_1_17:38251239-38251841:-|nuORF'] 4786 18681 ALEKHEVRDYL True H1975_Epitope_Rep1 1371.7146639640298 1371.71356993586 77.904 2 -1.4038885739401992 0.3954373074188196 1.0 ['ENST00000216294.4_1_14:62229123-62233722:+|nuORF'] 38400 20035 HGKKKKKPSVD True H1975_Epitope_Rep2 1250.7459045226599 1250.74426490379 83.045 3 -1.4039156726205615 0.3954373074188196 1.0 ['ENST00000445338.1_1_10:13633913-13634195:-|nuORF'] 108121 15580 TDNSLSLKTP True PC9_epitope_Rep5 1074.55570371114 1074.55460993586 64.938 2 -1.4040476330878329 0.3954373074188196 1.0 ['ENSG00000185864|ENST00000682606|NPIPB4', 'ENSG00000169203|ENST00000550665|NPIPB12', 'ENSG00000254206|ENST00000698511|NPIPB11', 'nc|ENSG00000243716|C9JG80|NPIPB4', 'ENSG00000198064|ENST00000697092|NPIPB13', 'ENSG00000243716|ENST00000424340|NPIPB5', 'nc|ENSG00000169246|Q92617|NPIPB3', 'nc|ENSG00000169246|Q92617-6|NPIPB3', 'nc|ENSG00000169246|Q92617-5|NPIPB3', 'ENSG00000169246|ENST00000542817|NPIPB3', 'nc|ENSG00000169246|Q92617-3|NPIPB3', 'nc|ENSG00000169246|Q92617-2|NPIPB3', 'ENSG00000196436|ENST00000692376|NPIPB15', 'ENSG00000196993|ENST00000357796|NPIPB9', 'ENSG00000255524|ENST00000683297|NPIPB8', 'ENSG00000198156|ENST00000695563|NPIPB6', 'ENSG00000233232|ENST00000452313|NPIPB7', 'ENSG00000234719|ENST00000399147|NPIPB2'] 65350 14851 LSENQHKKR True PC9_epitope_Rep2 1138.62070400954 1138.6196099358601 62.389 2 -1.4040509705096182 0.3954373074188196 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 3413 9045 AGKKKGLP True NCI_RA007_Epitope_Rep5 797.5123227775298 797.51122993586 41.45 2 -1.4041378185002102 0.3954373074188196 1.0 ['ENST00000370223.7_2_10:102767131-102767407:+|nuORF'] 69324 18838 LVPPRLAI True PC9_epitope_Rep5 877.5749230340899 877.57382993586 77.476 2 -1.404169366870365 0.3954373074188196 1.0 ['ENST00000405832.2_1_6:56297292-56297433:-|nuORF'] 133356 24985 WFFKGISRK True PC9_epitope_Rep2 1167.6552986131098 1167.65365490379 101.77 3 -1.4042145795942083 0.3954373074188196 1.0 ['nc|ENSG00000101336|P08631-3|HCK', 'nc|ENSG00000101336|P08631-2|HCK', 'nc|ENSG00000101336|P08631-4|HCK', 'ENSG00000101336|ENST00000375852|HCK', 'HCK|p.G350Qfs*9|1|0.36|ENSG00000101336|chr20:32088598-32088602|AGGGC/-|frameshift_variant'] 9854 8040 AYLPQYAHM True PC9_epitope_Rep5 1092.5062514209199 1092.5051499358601 35.863 2 -1.4042473802179622 0.3954373074188196 1.0 ['ITGB6-RBMS1|1|fusion', 'ITGB6-RBMS1|7|fusion', 'ITGB6-RBMS1|6|fusion', 'ITGB6-RBMS1|3|fusion', 'ITGB6-RBMS1|2|fusion', 'ITGB6-RBMS1|5|fusion', 'ITGB6-RBMS1|4|fusion', 'nc|ENSG00000153250|P29558-2|RBMS1', 'ENSG00000153250|ENST00000348849|RBMS1'] 10098 13430 AYVNNLNVTE True H1975_Epitope_Rep3 1135.55095268387 1135.54984993586 56.93 2 -1.40431226689978 0.3954373074188196 1.0 ['nc|ENSG00000291237|P04179-3|SOD2', 'nc|ENSG00000291237|P04179|SOD2', 'nc|ENSG00000291237|P04179-4|SOD2', 'nc|ENSG00000291237|P04179-2|SOD2'] 35188 17811 GSDLRPQFH True H1975_Epitope_Rep2 1055.5148419586699 1055.51374993586 73.831 2 -1.4043133717981242 0.3954373074188196 1.0 ['ENSG00000011485|ENST00000012443|PPP5C', 'ENST00000486994.5_1_19:46886892-46893600:+|nuORF', 'ENST00000527623.1_1_19:46891683-46893600:+|nuORF', 'ENST00000487483.6_1_19:46891669-46893605:+|nuORF'] 137246 22146 YLFKRFIF True PC9_epitope_Rep1 1132.64333694708 1132.64222993586 90.0 2 -1.4043308536672925 0.3954373074188196 1.0 ['ENST00000433529.6_1_2:70439571-70439754:-|nuORF'] 32258 19193 GFNWKLNFR True NCI_RA007_Epitope_Rep2 1180.6141620771198 1180.61306993586 79.529 2 -1.4044622079144267 0.39549187613325276 1.0 ['ENSG00000141429|ENST00000269195|GALNT1', 'ENST00000431076.5_1_2:155098684-155265690:+|nuORF', 'nc|ENSG00000144278|Q8IUC8-2|GALNT13', 'GALNT13|p.Y507Cfs*2|1|0.36|ENSG00000144278|chr2:154438714-154438718|ATATG/-|frameshift_variant', 'ENSG00000144278|ENST00000392825|GALNT13', 'nc|ENSG00000144278|Q8IUC8-3|GALNT13'] 52102 13039 KLPALRLLFEK True NCI_RA007_Epitope_Rep4 1326.8387422783396 1326.83710490379 57.256 3 -1.4045634771740685 0.39553459268564384 1.0 ['nc|ENSG00000104973|Q71SY5-5|MED25', 'ENSG00000104973|ENST00000312865|MED25', 'nc|ENSG00000104973|Q71SY5-4|MED25'] 120371 14163 VFRPEQDPV True PC9_epitope_Rep4 1085.55055876105 1085.54946993586 62.383 2 -1.40456947911586 0.3955417560409087 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 87003 2058 QRYQERSNLP True NCI_RA007_Epitope_Rep4 1289.6476470333698 1289.64601490379 11.559 3 -1.4046405222832927 0.3955607698141828 1.0 ['ENST00000366923.7_1_1:220152842-220152914:-|nuORF'] 116343 18274 TVYCVKAR True PC9_epitope_Rep5 938.5007721176598 938.49966993586 75.304 2 -1.404885068006594 0.3956461972365084 1.0 ['nc|ENSG00000142166|P17181-2|IFNAR1', 'nc|ENSG00000142166|P17181-4|IFNAR1', 'nc|ENSG00000142166|P17181-3|IFNAR1', 'ENSG00000142166|ENST00000270139|IFNAR1'] 15333 7917 EALARRQRHD True H1975_Epitope_Rep3 1250.65921477658 1250.65810993586 35.422 2 -1.4048883127451215 0.3956461972365084 1.0 ['ENST00000519973.5_1_8:23423709-23423784:+|nuORF'] 109456 6630 TGSVPPHP True NCI_RA007_Epitope_Rep3 790.39735259494 790.3962499358599 33.143 2 -1.4049493895355534 0.39565335892969294 1.0 ['ENST00000338148.7_1_2:99812767-99813088:+|nuORF'] 36510 6234 GVKGAKIK True PC9_epitope_Rep6 799.5279728416699 799.52686993586 32.461 2 -1.4051886289704674 0.39567237047921505 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 16504 5986 EENFLWMPAL True PC9_epitope_Rep2 1248.58489566444 1248.58378993586 28.412 2 -1.4052719688820896 0.3956795316925192 1.0 ['ENST00000360317.7_1_17:38073357-38073465:-|nuORF'] 22781 7173 EVDEFHLILEY True H1975_Epitope_Rep3 1405.67654711981 1405.6754499358601 32.566 2 -1.4053536826356143 0.39572471324296143 1.0 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000569517.5_1_15:73047978-73075652:-|nuORF', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF', 'ENST00000569534.5_1_15:73044684-73076051:-|nuORF', 'ENST00000569058.1_1_15:73052730-73076051:-|nuORF'] 20561 10694 EQDQESSEEEE True H1975_Epitope_Rep2 1337.47427805445 1337.47318993586 46.158 2 -1.4053729783778928 0.39572471324296143 1.0 ['ENSG00000114853|ENST00000232974|ZBTB47'] 16034 20706 EEAFVKESKE True PC9_epitope_Rep6 1194.5768330785397 1194.57517490379 92.408 3 -1.4053769239080987 0.39572471324296143 1.0 ['nc|ENSG00000175416|P09497-2|CLTB', 'ENSG00000175416|ENST00000310418|CLTB'] 87844 14887 QVKGAALP True NCI_RA007_Epitope_Rep5 782.4650382319398 782.46448496793 63.932 1 -1.4054291940021548 0.3957296554339068 1.0 ['ENST00000554746.1_1_14:85996623-86087517:+|nuORF'] 68939 25197 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 105.61 3 -1.4055325237999434 0.3957296554339068 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 68284 10636 LTRLLEFY True H1975_Epitope_Rep3 1053.5858816406098 1053.58478993586 45.985 2 -1.4056119038387505 0.3957296554339068 1.0 ['ENSG00000168434|ENST00000307149|COG7', 'COG7|p.T321S|1|0.37|ENSG00000168434|chr16:23424797-23424797|T/A|missense_variant'] 6968 11746 AQNVDWPVVY True H1975_Epitope_Rep2 1189.5767735088898 1189.57566993586 50.256 2 -1.4056743162811594 0.3957296554339068 1.0 ['KCNH5|p.I35N|1|0.32|ENSG00000140015|chr14:63016924-63016924|A/T|missense_variant'] 117902 11416 VAQKQLGRLW True PC9_epitope_Rep6 1197.6982260542497 1197.6971299358602 54.973 2 -1.405726554375333 0.39574644549763033 1.0 ['nc|ENSG00000113492|Q9BYV1-2|AGXT2', 'ENSG00000113492|ENST00000231420|AGXT2'] 68930 15607 LVFRHEIE True PC9_epitope_Rep1 1041.56072952193 1041.5596299358601 64.853 2 -1.4057451485865853 0.39574644549763033 1.0 ['ENSG00000147408|ENST00000692225|CSGALNACT1', 'nc|ENSG00000147408|Q8TDX6-2|CSGALNACT1', 'ENST00000397998.7_1_8:19263293-19315147:-|nuORF'] 52096 6406 KLNEDWYHQFY True H1975_Epitope_Rep3 1541.6939285194499 1541.6928299358601 29.618 2 -1.4058612633750798 0.39574644549763033 1.0 ['ADCY7|p.S874F|1|0.13|ENSG00000121281|chr16:50312906-50312906|C/T|missense_variant'] 52993 13385 KRRARLVV True NCI_RA007_Epitope_Rep4 996.6668663563198 996.66576993586 58.657 2 -1.4058692417938774 0.39574644549763033 1.0 ['ENSG00000162738|ENST00000368061|VANGL2'] 36920 21657 GVQWRYRSSL True PC9_epitope_Rep2 1250.6520041378199 1250.65090993586 88.779 2 -1.4059250198698885 0.3957773012168102 1.0 ['AluJo_dup31358|chr7:139036456-139036762:-|1.0349885509042276|0.2549609110980715|2.02|499.0|12|1|anti-sense'] 73486 9824 NEYEQLNY True H1975_Epitope_Rep2 1071.45090428943 1071.44980993586 42.771 2 -1.4060679011838875 0.3958200042653018 1.0 ['nc|ENSG00000118564|Q9UKA1-2|FBXL5', 'ENSG00000118564|ENST00000341285|FBXL5'] 126079 16826 VPCYVHIL True NCI_RA007_Epitope_Rep5 942.4997094885 942.49860993586 71.47 2 -1.4062081829016115 0.3958320992334759 1.0 ['ENSG00000187747|ENST00000345043|OR52B6'] 78670 17345 PECCPGEM True H1975_Epitope_Rep2 864.2815967603199 864.28048993586 72.013 2 -1.4062185789563737 0.3958320992334759 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 17002 5674 EGKMYACQYC True H1975_Epitope_Rep3 1194.4507873437399 1194.44968993586 26.854 2 -1.406232423670058 0.3958320992334759 1.0 ['ENSG00000184677|ENST00000375647|ZBTB40'] 126189 15637 VPGISKDL True PC9_epitope_Rep6 827.47526856247 827.47416993586 72.351 2 -1.4062337553512112 0.3958320992334759 1.0 ['nc|ENSG00000136631|Q9NRW7-2|VPS45', 'ENST00000477558.1_1_1:150049710-150054979:+|nuORF', 'ENSG00000136631|ENST00000644510|VPS45'] 26940 17942 FLIDMERF True PC9_epitope_Rep2 1069.52665251233 1069.52554993586 74.319 2 -1.4062541904532049 0.3958320992334759 1.0 ['ENSG00000163251|ENST00000295417|FZD5', 'ENSG00000177283|ENST00000374694|FZD8'] 43819 3877 IKRNRYYDEDE True NCI_RA007_Epitope_Rep1 1499.7004704518702 1499.69881490379 19.1 3 -1.4063195744517458 0.3958392569424699 1.0 ['ENSG00000050405|ENST00000341247|LIMA1', 'nc|ENSG00000050405|Q9UHB6-4|LIMA1', 'nc|ENSG00000050405|Q9UHB6-3|LIMA1', 'nc|ENSG00000050405|Q9UHB6-2|LIMA1', 'nc|ENSG00000050405|Q9UHB6-5|LIMA1'] 103956 7803 SRPSRPRW True H1975_Epitope_Rep3 1040.5627952106 1040.5616899358602 34.997 2 -1.4063228959291845 0.395846414481868 1.0 ['ENST00000394232.5_1_15:91769629-91769731:+|nuORF'] 52359 18550 KPGEREIVIT True NCI_RA007_Epitope_Rep5 1140.6502728023197 1140.64861490379 78.176 3 -1.4063900027467815 0.3958560394256741 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-3|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-4|ADGRV1', 'ENST00000504142.2_2_5:89924394-89949789:+|nuORF'] 62643 19519 LLVRWKFQQE True NCI_RA007_Epitope_Rep2 1345.7506555499301 1345.7495499358602 80.863 2 -1.4064252405147795 0.3958560394256741 1.0 ['ENST00000360409.7_1_2:206547732-206547855:+|nuORF'] 63231 16008 LPAAGLSGL True PC9_epitope_Rep6 797.46470387877 797.46360993586 73.889 2 -1.4064395041093778 0.3958560394256741 1.0 ['nc|ENSG00000258537|P0C7T7|FRMD6-AS1'] 19009 12859 ELGGQQHNRRV True H1975_Epitope_Rep1 1292.66977946028 1292.6686899358601 54.531 2 -1.40647690753892 0.3958631964270906 1.0 ['ENST00000509793.5_1_4:110834279-110834522:+|nuORF'] 120832 16692 VGDLSAAH True PC9_epitope_Rep3 768.3766171503601 768.37552993586 69.34 2 -1.4065461719732772 0.3958703532589381 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2', 'NID2|p.A1169Sfs*8|1|0.21|ENSG00000087303|chr14:52011595-52011599|CCAGC/-|frameshift_variant', 'NID2|p.P437Qfs*22|1|0.37|ENSG00000087303|chr14:52053698-52053698|G/-|frameshift_variant'] 19891 6473 ELWKNDLS True PC9_epitope_Rep2 1003.49746055903 1003.49636993586 30.313 2 -1.4065552095592977 0.3958752872610107 1.0 ['ENST00000392244.7_1_2:203071532-203071586:-|nuORF'] 109333 6831 TGGVFLMV True PC9_epitope_Rep2 822.4309612223399 822.42986993586 31.68 2 -1.4065596699651457 0.3958752872610107 1.0 ['nc|ENSG00000007062|O43490-5|PROM1', 'nc|ENSG00000007062|O43490-3|PROM1', 'nc|ENSG00000007062|O43490-4|PROM1', 'nc|ENSG00000007062|O43490-6|PROM1', 'nc|ENSG00000007062|O43490-7|PROM1', 'nc|ENSG00000007062|O43490-2|PROM1', 'ENSG00000007062|ENST00000447510|PROM1'] 130822 25186 VVFILQKA True PC9_epitope_Rep2 916.57458868092 916.57348993586 102.54 2 -1.406566855056849 0.3958752872610107 1.0 ['ENST00000507310.1_2_5:102482311-102483895:+|nuORF', 'ENST00000321521.13_1_5:102482350-102484949:+|nuORF'] 46929 10088 IVLGVLAEHDP True PC9_epitope_Rep3 1161.6393737654498 1161.63772490379 43.757 3 -1.4066437576814357 0.3958752872610107 1.0 ['ENST00000552666.1_1_14:36235117-36235897:+|nuORF'] 123608 22042 VIKRKSLQS True H1975_Epitope_Rep3 1057.6607779163699 1057.6596899358601 92.168 2 -1.4067234637779198 0.3958802207955272 1.0 ['IL16|p.R1317K|1|0.55|ENSG00000172349|chr15:81308749-81308749|G/A|missense_variant'] 3435 11319 AGLAVHRGGHF True PC9_epitope_Rep2 1120.58900995844 1120.5879099358601 48.861 2 -1.406726280734124 0.3958802207955272 1.0 ['ENSG00000112406|ENST00000367658|HECA'] 119239 9155 VEKYLLEKSR True H1975_Epitope_Rep1 1263.7186867153098 1263.7175899358601 40.121 2 -1.40674566998486 0.3958802207955272 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B', 'nc|ENSG00000066933|B2RTY4-5|MYO9A', 'nc|ENSG00000066933|B2RTY4-2|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A', 'MYO9A|p.R1220Vfs*8|1|0.12|ENSG00000066933|chr15:71898845-71898845|G/-|frameshift_variant', 'ENST00000563542.5_1_15:72185266-72338904:-|nuORF', 'nc|ENSG00000066933|B2RTY4-3|MYO9A'] 35420 10724 GTDLPSKST True PC9_epitope_Rep2 904.4501760134401 904.44906993586 46.567 2 -1.4067727783619877 0.3958802207955272 1.0 ['ENSG00000198597|ENST00000355537|ZNF536'] 27492 13665 FPDNFVKEIER True H1975_Epitope_Rep1 1392.70376492716 1392.70266993586 57.697 2 -1.406855684626344 0.3959229120026533 1.0 ['CD2AP|p.K58E|1|0.23|ENSG00000198087|chr6:47533608-47533608|A/G|missense_variant'] 25677 7066 FFFFFFFCQEK True H1975_Epitope_Rep1 1535.6947804665895 1535.6936899358602 32.213 2 -1.406963513644275 0.39593006727944663 1.0 ['ENST00000481451.1_1_10:124183684-124184496:+|nuORF'] 28915 7189 FTEEVIEYFQ True H1975_Epitope_Rep1 1303.5972341699496 1303.59612993586 32.672 2 -1.407025884284209 0.3959539968494238 1.0 ['nc|ENSG00000100336|Q9BPW4-3|APOL4', 'ENSG00000100336|ENST00000683024|APOL4', 'nc|ENSG00000100336|Q9BPW4|APOL4'] 11023 7483 DDIFNRLVFR True NCI_RA007_Epitope_Rep2 1293.6829699129298 1293.68131490379 33.736 3 -1.4070796162567216 0.3959539968494238 1.0 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 64629 20185 LRFFLEYQ True PC9_epitope_Rep5 1114.5811306133398 1114.58057496793 82.691 1 -1.407173382054881 0.3959539968494238 1.0 ['ENST00000587406.5_1_19:19232302-19249261:-|nuORF', 'ENSG00000064545|ENST00000162044|TMEM161A', 'ENST00000589448.5_1_19:19230741-19243387:-|nuORF'] 102127 13290 SPQQTLLS True NCI_RA007_Epitope_Rep3 872.4603467743199 872.45924993586 59.544 2 -1.4071840302474625 0.3959539968494238 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000564574.5_2_16:28493646-28503072:-|nuORF', 'nc|ENSG00000261832|Q13286-4|CLN3', 'ENST00000566083.6_2_16:28493835-28503080:-|nuORF'] 41352 8801 IAMALMTP True PC9_epitope_Rep1 846.43433235062 846.43322993586 38.695 2 -1.4072121295491284 0.3959539968494238 1.0 ['ENST00000446760.2_1:146412138-146412798:+|nuORF'] 6055 5639 APMDVGEEPL True NCI_RA007_Epitope_Rep2 1056.47976188956 1056.4786699358601 26.548 2 -1.4072514807027374 0.39597299538078884 1.0 ['ENSG00000197594|ENST00000647893|ENPP1', 'ENPP1|p.I889Sfs*24|1|0.15|ENSG00000197594|chr6:131890396-131890396|G/-|frameshift_variant'] 92191 17947 RQGHHAAG True NCI_RA007_Epitope_Rep4 832.4052319400398 832.4041299358599 77.651 2 -1.407265539094978 0.395991993462117 1.0 ['ENST00000525164.5_1_1:1248165-1249114:-|nuORF'] 66869 18994 LSWEYRLP True PC9_epitope_Rep2 1062.5498304850598 1062.5487299358601 78.427 2 -1.4072836826636692 0.39599445714353393 1.0 ['ENST00000484580.6_1_17:26883511-26887327:-|nuORF'] 110584 22319 TISLRSRK True PC9_epitope_Rep3 959.58761297611 959.58650993586 91.136 2 -1.407291295445074 0.39599445714353393 1.0 ['ENST00000456324.5_1_19:36727051-36727096:+|nuORF'] 65352 13320 LSENQHKKR True PC9_epitope_Rep6 1138.62070400954 1138.6196099358601 62.891 2 -1.4073246468266158 0.3959969207082371 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 68922 7019 LVFLLWGSY True H1975_Epitope_Rep3 1096.59571804832 1096.5946299358602 31.961 2 -1.4073547073411707 0.3959969207082371 1.0 ['nc|ENSG00000076248|P13051-2|UNG', 'ENSG00000076248|ENST00000242576|UNG'] 55442 17603 LATRTQKK True PC9_epitope_Rep4 944.5767139392399 944.57560993586 75.726 2 -1.407373297539949 0.39600184748753536 1.0 ['nc|ENSG00000170802|P32314-2|FOXN2'] 124767 11211 VLKPAIAL True NCI_RA007_Epitope_Rep4 823.5531249603499 823.55202993586 50.012 2 -1.4073993323157716 0.39600184748753536 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant'] 117568 8834 VAGGYGIL True PC9_epitope_Rep5 748.41194002992 748.41084993586 38.926 2 -1.4074409656311466 0.39600184748753536 1.0 ['CON__Q6NXH9'] 81990 8164 PSSKFFFPSFR True PC9_epitope_Rep3 1345.68190728377 1345.68025490379 36.382 3 -1.40747144959306 0.39600184748753536 1.0 ['chr2:142882098-142885349|106|20.07|0.2|6.64|+|1|TE_info:L2a,L2a_dup23497,L2,LINE,donor,+,142882052,142882098|None,KYNU|2'] 67648 21895 LTFFCTNAT True NCI_RA007_Epitope_Rep5 1016.4637179026 1016.46262993586 91.346 2 -1.4074999266114845 0.3960090004737091 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D', 'SCNN1D|p.F185Sfs*12|1|0.36|ENSG00000162572|chr1:1286895-1286895|C/-|frameshift_variant'] 47955 23747 KAARVKFRR True NCI_RA007_Epitope_Rep3 1130.7148791778998 1130.7137899358602 102.94 2 -1.4075917606421824 0.3960257685566766 1.0 ['ENST00000476624.1_1_9:130688065-130688256:-|nuORF'] 15263 6547 EAGRLRHR True NCI_RA007_Epitope_Rep1 993.5580441833299 993.55694993586 29.481 2 -1.4076303281521276 0.3960257685566766 1.0 ['ENST00000548577.1_17:6915938-6917031:+|nuORF', 'nc|ENSG00000219200|Q6P5S7-2|RNASEK'] 135429 13051 YDTERGFSI True H1975_Epitope_Rep1 1086.4981888350198 1086.49767496793 55.287 1 -1.4076758774180385 0.3960257685566766 1.0 ['nc|ENSG00000125675|P42263|GRIA3', 'ENSG00000125675|ENST00000620443|GRIA3'] 3481 15149 AGLPEFKEL True NCI_RA007_Epitope_Rep5 1002.5385970950199 1002.53750993586 64.95 2 -1.407730336404005 0.3960257685566766 1.0 ['ENSG00000167306|ENST00000285039|MYO5B'] 121907 10263 VGPLELEI True NCI_RA007_Epitope_Rep3 868.4905842734399 868.49003496793 47.444 1 -1.4077791931787806 0.39603292083604713 1.0 ['ENSG00000141519|ENST00000397545|CCDC40', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'ENST00000572253.5_1_17:78055494-78060128:+|nuORF'] 28978 17106 FTGTPGRE True NCI_RA007_Epitope_Rep2 863.4137309350699 863.4131849679301 71.278 1 -1.4078785951776815 0.39606375672027094 1.0 ['PGBD4|p.K95E|1|0.41|ENSG00000182405|chr15:34102814-34102814|A/G|missense_variant'] 117326 19456 VAAKKVGTEI True PC9_epitope_Rep4 1014.6073453611799 1014.60624993586 82.953 2 -1.4079313933693116 0.39609459187419327 1.0 ['nc|ENSG00000133256|P35913-3|PDE6B', 'ENSG00000133256|ENST00000496514|PDE6B'] 126798 11219 VPSQLRAFTVP True PC9_epitope_Rep3 1213.68190728377 1213.68080993586 48.162 2 -1.4080789141561572 0.3961325770583429 1.0 ['nc|nan|Q9H6X5-2|C19orf44', 'ENSG00000105072|ENST00000221671|C19orf44'] 62807 18286 LMHFILRKYK True PC9_epitope_Rep4 1347.7849328836699 1347.78382993586 78.407 2 -1.4080813376284889 0.3961325770583429 1.0 ['ENSG00000214107|ENST00000397548|MAGEB1'] 23701 7335 EYIIRTLSRVE True NCI_RA007_Epitope_Rep4 1377.7616141564502 1377.76050993586 34.852 2 -1.4082163419812674 0.39617525162818235 1.0 ['nc|ENSG00000196376|Q5T1Q4-2|SLC35F1', 'ENSG00000196376|ENST00000360388|SLC35F1'] 18419 2689 EKERSRMRKEW True NCI_RA007_Epitope_Rep2 1533.7834293135297 1533.78121987172 14.685 4 -1.4082911113482677 0.3961824016293472 1.0 ['ENST00000401878.7_2_7:155570161-155570317:+|nuORF'] 112444 21582 TNLRQLTKTSR True PC9_epitope_Rep6 1316.75244645508 1316.7508049037901 95.891 3 -1.4083572108417504 0.39618955146118506 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 99410 16498 SLEEKDQRI True PC9_epitope_Rep6 1116.5775017848798 1116.57640993586 75.89 2 -1.4084011897931918 0.3961897770463076 1.0 ['nc|ENSG00000263155|P0CAP1-8|MYZAP', 'nc|ENSG00000263155|P0CAP1-5|MYZAP', 'nc|ENSG00000263155|P0CAP1-10|MYZAP', 'nc|ENSG00000263155|P0CAP1-7|MYZAP', 'nc|ENSG00000263155|P0CAP1-6|MYZAP', 'nc|ENSG00000263155|P0CAP1-9|MYZAP', 'nc|ENSG00000263155|P0CAP1-3|MYZAP', 'nc|ENSG00000263155|P0CAP1-4|MYZAP', 'nc|ENSG00000263155|P0CAP1-2|MYZAP', 'ENSG00000263155|ENST00000267853|MYZAP', 'nc|ENSG00000263155|P0CAP1-11|MYZAP'] 6541 5231 APVHAALVH True NCI_RA007_Epitope_Rep3 913.5133854066901 913.5122899358599 27.581 2 -1.4084239541006665 0.3961897770463076 1.0 ['ENST00000294360.4_1_1:53680060-53680234:-|nuORF'] 61999 12274 LLLREAEL True PC9_epitope_Rep2 955.57023157647 955.56912993586 52.521 2 -1.4084552046746226 0.3961897770463076 1.0 ['ENSG00000105538|ENST00000222145|RASIP1'] 99027 24720 SKRQLVPGKP True PC9_epitope_Rep4 1108.6716769532397 1108.67117496793 103.58 1 -1.4084603272726262 0.3961897770463076 1.0 ['ENST00000219069.5_1_16:3333909-3334074:+|nuORF'] 81228 19361 PPLVVSST True NCI_RA007_Epitope_Rep5 798.4487194614601 798.44762993586 81.353 2 -1.4084674121607426 0.3961897770463076 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 104353 6033 SSFFNQKYKSE True H1975_Epitope_Rep3 1363.64083031743 1363.63972993586 28.22 2 -1.4085038685730344 0.39620876648748493 1.0 ['ENST00000474889.5_1_3:62254795-62257092:+|nuORF'] 105487 11035 SVCLSIISML True PC9_epitope_Rep1 1064.56098941572 1064.5598899358602 47.334 2 -1.4085683001801228 0.3962255215363122 1.0 ['ENST00000362030.3_1_1:96884238-96884478:+|nuORF', 'ENST00000519277.5_1_8:74708911-74722861:-|nuORF', 'ENST00000519255.2_1_8:74708126-74722861:-|nuORF', 'ENSG00000104343|ENST00000602593|UBE2W', 'nc|ENSG00000104343|Q96B02-2|UBE2W', 'nc|ENSG00000104343|Q96B02-3|UBE2W'] 29927 25338 FWPANHNPF True NCI_RA007_Epitope_Rep5 1128.5141136826799 1128.51247490379 105.0 3 -1.4085776120117646 0.3962255215363122 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 23055 11619 EVKVKCVL True NCI_RA007_Epitope_Rep5 916.5415743004799 916.54046993586 51.345 2 -1.4085954687797642 0.3962255215363122 1.0 ['ENST00000397766.3_1_15:34394281-34394365:+|nuORF'] 111059 6163 TLDTAQLGPPS True NCI_RA007_Epitope_Rep2 1098.5557037111398 1098.55460993586 28.58 2 -1.4085955365413574 0.3962255215363122 1.0 ['ENST00000380535.8_1_17:7461935-7461992:+|nuORF'] 123783 16018 VISVLTTP True PC9_epitope_Rep3 828.49566965388 828.49456993586 66.761 2 -1.4087009601997222 0.3962445094301647 1.0 ['ENST00000433544.1_1_1:94219789-94240816:-|nuORF'] 85542 21085 QLKYSETP True PC9_epitope_Rep1 964.48656152216 964.48546993586 85.933 2 -1.4087915503374357 0.39624696619901734 1.0 ['ENSG00000179008|ENST00000321731|C14orf39'] 96824 8510 SESGRVLQIS True PC9_epitope_Rep1 1074.56693710118 1074.5658499358601 37.571 2 -1.408801106672455 0.39624696619901734 1.0 ['nc|ENSG00000116151|Q5T089-2|MORN1', 'ENSG00000116151|ENST00000378531|MORN1', 'ENST00000606372.5_1_1:2263981-2323005:-|nuORF'] 80139 17242 PKLRELLII True H1975_Epitope_Rep3 1093.7223155437698 1093.7217749679298 71.963 1 -1.4088373707648867 0.3962494228515278 1.0 ['ENSG00000079785|ENST00000233084|DDX1', 'nc|ENSG00000079785|Q92499-3|DDX1', 'nc|ENSG00000079785|Q92499-2|DDX1'] 85516 9534 QLKELHPLHR True PC9_epitope_Rep5 1269.73058881169 1269.72895490379 41.631 3 -1.4088555604285784 0.3962494228515278 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 34037 17229 GNNRGYAFV True NCI_RA007_Epitope_Rep5 996.4777281739599 996.47662993586 73.045 2 -1.4088647547416968 0.39625657053558744 1.0 ['nc|ENSG00000148584|Q9NQ94-5|A1CF', 'nc|ENSG00000148584|Q9NQ94-6|A1CF', 'nc|ENSG00000148584|Q9NQ94-3|A1CF', 'ENSG00000148584|ENST00000373997|A1CF', 'nc|ENSG00000148584|Q9NQ94|A1CF', 'nc|ENSG00000148584|Q9NQ94-4|A1CF'] 117962 10339 VARSKDIE True PC9_epitope_Rep3 916.4977949121999 916.49668993586 44.713 2 -1.4089181133555342 0.39626371805040905 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3', 'ENST00000508449.1_1_10:61842291-61844452:-|nuORF'] 83551 4011 QDPFYPRGP True NCI_RA007_Epitope_Rep2 1075.5086939490698 1075.50758993586 20.24 2 -1.4090063425878672 0.39629454244110335 1.0 ['ENSG00000133142|ENST00000472484|TCEAL4', 'nc|ENSG00000133142|Q96EI5-2|TCEAL4', 'ENSG00000184905|ENST00000372780|TCEAL2'] 79127 2781 PGAGVHPK True NCI_RA007_Epitope_Rep1 761.4184223926899 761.41732993586 14.708 2 -1.4090482975947067 0.39629476176383543 1.0 ['ENSG00000168939|ENST00000695325|SPRY3'] 3847 5172 AGYYLKLRMWM True PC9_epitope_Rep5 1430.72028402178 1430.71864490379 24.913 3 -1.4091306169077347 0.39629476176383543 1.0 ['ENST00000466883.5_1_7:65432878-65439439:-|nuORF'] 112072 15786 TLTKEKVPLER True NCI_RA007_Epitope_Rep2 1312.7714505641597 1312.7703499358602 66.121 2 -1.4091444919554545 0.39629476176383543 1.0 ['ENSG00000003509|ENST00000002125|NDUFAF7', 'ENST00000474154.5_1_2:37458848-37468954:+|nuORF'] 122475 8165 VGSPSLTR True PC9_epitope_Rep4 815.4501164437901 815.44900993586 38.862 2 -1.4091484671979255 0.39629476176383543 1.0 ['ENSG00000130338|ENST00000367097|TULP4', 'nc|ENSG00000130338|Q9NRJ4-2|TULP4'] 78787 16187 PELEIDVDELL True PC9_epitope_Rep3 1283.64966366563 1283.64802490379 67.401 3 -1.409165393847079 0.39629476176383543 1.0 ['ENST00000509033.1_1_4:140036086-140036467:-|nuORF', 'ENSG00000173457|ENST00000309318|PPP1R14B'] 121818 12484 VGNGKGAA True NCI_RA007_Epitope_Rep3 672.3554877829599 672.35493496793 56.332 1 -1.4092892400897137 0.39630905453555404 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 137249 20063 YLFKRFIF True PC9_epitope_Rep6 1132.64333694708 1132.64222993586 89.839 2 -1.409293947009539 0.39630905453555404 1.0 ['ENST00000433529.6_1_2:70439571-70439754:-|nuORF'] 81339 13875 PPRQLLEDI True PC9_epitope_Rep5 1079.59750895347 1079.59640993586 58.39 2 -1.4093072792590486 0.39631150936919235 1.0 ['ENSG00000204616|ENST00000376734|TRIM31'] 60734 25705 LKALWALA True NCI_RA007_Epitope_Rep5 884.5483739330799 884.5478249679301 106.42 1 -1.4093185252836768 0.39631150936919235 1.0 ['nc|ENSG00000219438|Q7Z5A7-2|TAFA5'] 37178 12131 GVTRTEFP True PC9_epitope_Rep3 905.4606811274899 905.45958993586 51.704 2 -1.4093883719578724 0.39631396408659936 1.0 ['ENST00000394518.6_1_15:86290571-86290709:+|nuORF'] 93418 19554 RRYKLQKQ True NCI_RA007_Epitope_Rep2 1118.6672602791398 1118.6661699358601 81.001 2 -1.4093935815256562 0.39631396408659936 1.0 ['ENST00000473916.1_1_6:30891971-30893984:+|nuORF', 'nc|ENSG00000137411|Q5ST30-2|VARS2', 'ENST00000469358.5_1_6:30889720-30893984:+|nuORF', 'ENST00000477288.5_1_6:30884740-30893984:+|nuORF', 'nc|ENSG00000137411|Q5ST30-3|VARS2', 'ENSG00000137411|ENST00000676266|VARS2', 'nc|ENSG00000137411|Q5ST30-4|VARS2'] 111809 8655 TLRFICLE True NCI_RA007_Epitope_Rep5 993.5317378927699 993.53118496793 39.96 1 -1.4095265582005039 0.3963449998224579 1.0 ['PRAMEF19|p.R336C|1|0.18|ENSG00000204480|chr1:13369501-13369501|G/A|missense_variant'] 18435 22150 EKGRRLRQLQQ True H1975_Epitope_Rep2 1410.81677804714 1410.81514490379 91.548 3 -1.409534206939995 0.3963449998224579 1.0 ['ENSG00000175467|ENST00000312397|SART1'] 131375 20799 VVSPHGGL True PC9_epitope_Rep3 764.41808803952 764.41698993586 85.276 2 -1.4095657962833765 0.3963449998224579 1.0 ['nc|ENSG00000130150|Q8NHP6-2|MOSPD2', 'ENSG00000130150|ENST00000380492|MOSPD2'] 140529 4749 YYKNTLIQWKY True H1975_Epitope_Rep3 1518.7871006282999 1518.78544490379 23.393 3 -1.4096093647410004 0.3963449998224579 1.0 ['ENST00000565493.1_1_20:34634032-34634152:-|nuORF'] 780 22831 AAYLFLLFL True PC9_epitope_Rep1 1069.62120452017 1069.62010993586 92.617 2 -1.4096601117066057 0.3963449998224579 1.0 ['ENST00000490075.5_1_1:17304687-17307094:-|nuORF', 'ENST00000476788.5_1_1:17303371-17307094:-|nuORF', 'ENST00000478684.5_1_1:17302954-17304768:-|nuORF', 'nc|ENSG00000117122|P55001-3|MFAP2', 'nc|ENSG00000117122|P55001-2|MFAP2', 'ENSG00000117122|ENST00000375535|MFAP2'] 81625 9645 PRRDYATAVP True PC9_epitope_Rep1 1144.5989059357998 1144.5978099358601 41.955 2 -1.4096947225299077 0.3963449998224579 1.0 ['ENSG00000116819|ENST00000373235|TFAP2E'] 17999 5797 EIHQAGGGIH True NCI_RA007_Epitope_Rep2 1017.4991918945298 1017.49808993586 27.167 2 -1.409744172437451 0.3963474535146587 1.0 ['ENSG00000139344|ENST00000266736|AMDHD1'] 60026 14019 LHRLLLLFLV True PC9_epitope_Rep3 1235.81179925451 1235.8101449037902 59.006 3 -1.4097940618702276 0.3963474535146587 1.0 ['nc|ENSG00000143552|Q5VU65-2|NUP210L', 'ENSG00000143552|ENST00000368559|NUP210L'] 120230 22971 VFNFFIFL True PC9_epitope_Rep5 1045.5636896440499 1045.5625899358602 93.349 2 -1.4098167470400107 0.39634990709069606 1.0 ['ENSG00000157570|ENST00000520358|TSPAN18'] 104603 24835 SSTLVLIVLV True NCI_RA007_Epitope_Rep5 1042.66379760814 1042.66327496793 103.02 1 -1.4098322935154242 0.39634990709069606 1.0 ['ENSG00000185742|ENST00000327419|C11orf87'] 128847 13029 VSSLLTLP True NCI_RA007_Epitope_Rep3 828.49566965388 828.49456993586 58.521 2 -1.4098995169125617 0.39635236055057815 1.0 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF', 'MARCHF6|p.G171Efs*88|1|0.32|ENSG00000145495|chr5:10390432-10390432|G/-|frameshift_variant', 'ENST00000372936.3_1_X:100306358-100306577:-|nuORF'] 55933 16526 LDHFLNFQL True PC9_epitope_Rep2 1145.58694426977 1145.58529490379 68.807 3 -1.409945481535136 0.39635236055057815 1.0 ['ENST00000372733.3_1_20:43955620-43955659:-|nuORF'] 115067 21647 TTSFAGSS True H1975_Epitope_Rep2 756.3289982516001 756.32790993586 89.549 2 -1.4100303006067834 0.3963762455916116 1.0 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20', 'ENST00000457750.1_1_3:195341833-195346985:+|nuORF'] 16292 15871 EEILDGNDEKY True PC9_epitope_Rep5 1323.58304065779 1323.5819499358602 66.039 2 -1.4101550410031114 0.3963762455916116 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1', 'ENST00000491967.1_1_22:24135798-24143581:+|nuORF'] 139659 16600 YTSQTTRLL True PC9_epitope_Rep2 1081.57677350889 1081.57566993586 69.094 2 -1.410170477341216 0.3963762455916116 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 56281 19592 LDQLRKTV True PC9_epitope_Rep6 971.57637958607 971.57528993586 88.024 2 -1.4101742248112492 0.3963762455916116 1.0 ['ENST00000490762.5_1_16:240794-277276:-|nuORF', 'nc|ENSG00000007392|Q9NQ29-2|LUC7L', 'nc|ENSG00000007392|Q9NQ29-3|LUC7L', 'ENSG00000007392|ENST00000293872|LUC7L'] 12415 17809 DKHSKKAKKEK True NCI_RA007_Epitope_Rep5 1325.77793292693 1325.7768299358602 75.296 2 -1.4101949856740992 0.3963762455916116 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'CWF19L2|p.A394Ifs*9|1|0.27|ENSG00000152404|chr11:107429055-107429056|AA/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 120361 12102 VFRGPRAEAL True H1975_Epitope_Rep3 1114.6247267608198 1114.6236299358602 51.716 2 -1.410225412849274 0.39639522361211377 1.0 ['ENST00000246553.3_1_19:35843468-35843927:+|nuORF'] 54566 16896 LAATRPRA True NCI_RA007_Epitope_Rep1 854.5086343794198 854.50808496793 69.849 1 -1.4102880287480832 0.39641420118343196 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6', 'ENST00000602588.1_2_2:84885442-84924911:+|nuORF'] 10143 3892 CCCCCCSC True PC9_epitope_Rep1 826.10688658094 826.10578993586 19.876 2 -1.4103250372605471 0.396421344126105 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 60318 24932 LIFMNERSR True PC9_epitope_Rep3 1164.60736244452 1164.6062699358602 101.26 2 -1.4104155707436397 0.39643562950427796 1.0 ['ENST00000425528.5_3_19:12834600-12834645:-|nuORF'] 98736 12596 SIRRWAYQMFR True NCI_RA007_Epitope_Rep5 1512.7772217342797 1512.7761299358601 55.103 2 -1.4104394357827181 0.39643562950427796 1.0 ['ACACB|p.E285Q|1|0.24|ENSG00000076555|chr12:109167962-109167962|G/C|missense_variant'] 133829 9521 WLWKMDQPEMI True H1975_Epitope_Rep1 1475.6941288435899 1475.69302993586 41.545 2 -1.4105202349917605 0.39650908230282234 1.0 ['ENSG00000277149|ENST00000620995|TYW1B'] 62317 21209 LLRDCYLL True PC9_epitope_Rep2 1007.5473879569099 1007.54628993586 87.039 2 -1.4105293787958275 0.39650908230282234 1.0 ['nc|ENSG00000117155|Q9Y2D8-2|SSX2IP', 'nc|ENSG00000117155|Q9Y2D8-3|SSX2IP', 'ENSG00000117155|ENST00000342203|SSX2IP'] 104574 18886 SSSQGLKLKK True NCI_RA007_Epitope_Rep5 1074.6397081186199 1074.6386099358601 79.491 2 -1.4105549206273864 0.3965162237000923 1.0 ['nc|ENSG00000141576|Q96PX1-2|RNF157', 'ENSG00000141576|ENST00000269391|RNF157'] 117221 19827 TYTYECIKEAN True PC9_epitope_Rep2 1333.58601786325 1333.5843749037901 81.654 3 -1.4106493311875794 0.39653519826759914 1.0 ['nc|ENSG00000164823|Q9Y236|OSGIN2', 'ENSG00000164823|ENST00000451899|OSGIN2'] 84077 13667 QEQEERRRRAR True NCI_RA007_Epitope_Rep2 1512.7981678608796 1512.79706993586 57.804 2 -1.4106870786247425 0.3965447875991007 1.0 ['nc|ENSG00000198720|Q86YJ7-2|ANKRD13B', 'ENST00000487527.5_1_17:27916841-27940597:+|nuORF', 'ENSG00000198720|ENST00000394859|ANKRD13B'] 14920 8271 DYLCISFEY True H1975_Epitope_Rep1 1151.48451291683 1151.4834099358602 36.748 2 -1.4108032435738111 0.3965447875991007 1.0 ['nc|ENSG00000148925|Q9BSF8-2|BTBD10', 'ENSG00000148925|ENST00000278174|BTBD10', 'ENST00000525661.5_1_11:13427176-13461653:-|nuORF', 'ENST00000525864.5_1_11:13427176-13484721:-|nuORF'] 25302 13582 FEEKHRRDF True H1975_Epitope_Rep3 1262.6156186290998 1262.6145299358602 57.526 2 -1.4108057262920581 0.3965447875991007 1.0 ['ENST00000396060.6_1_15:59931232-59931334:-|nuORF'] 128140 13938 VRRVRAKRPP True NCI_RA007_Epitope_Rep4 1233.7894411004897 1233.78778490379 60.89 3 -1.4109121501022444 0.3965755937096946 1.0 ['ENST00000558457.5_1_15:41576231-41578244:+|nuORF', 'ENST00000560545.1_1_15:41576231-41577603:+|nuORF'] 87266 23650 QSRRTFIKSV True PC9_epitope_Rep1 1220.69895433024 1220.6978499358602 95.76 2 -1.4110438786384871 0.39660639909125334 1.0 ['ENSG00000133048|ENST00000255409|CHI3L1', 'CHI3L1|p.P124L|2|0.26|ENSG00000133048|chr1:203183735-203183735|G/A|missense_variant'] 39147 14242 HLEFGLGF True PC9_epitope_Rep4 918.4599528514999 918.45884993586 62.687 2 -1.411115067730165 0.3966253712446606 1.0 ['COL6A3|p.R1998L|1|0.29|ENSG00000163359|chr2:237363323-237363323|C/A|missense_variant'] 29990 5599 FYFFLQWFV True PC9_epitope_Rep3 1295.6379172134698 1295.63626490379 26.613 3 -1.4111799479521767 0.3966443429490972 1.0 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|2|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|35'] 10817 10205 DAGIIVLA True H1975_Epitope_Rep1 770.4538048419 770.4532549679301 44.194 1 -1.4112847268548694 0.39665862085285625 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12'] 5252 20328 ALQQLGRAL True PC9_epitope_Rep5 968.5767139392399 968.57560993586 83.228 2 -1.4113216718279435 0.39665862085285625 1.0 ['ENST00000526142.5_1_11:428365-428637:-|nuORF'] 22498 13946 ETIQVHRRYWR True H1975_Epitope_Rep3 1542.81677804714 1542.81568993586 58.959 2 -1.4114327287344048 0.3966775914904694 1.0 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 125249 9913 VLREVDLL True PC9_epitope_Rep4 955.5702315764698 955.56912993586 45.782 2 -1.4115054733682766 0.3967202252774557 1.0 ['ENSG00000158106|ENST00000289013|RHPN1', 'ENST00000522335.5_1_8:144462155-144464818:+|nuORF'] 78825 23597 PEPPYPIPEE True PC9_epitope_Rep1 1166.54955570154 1166.5484499358602 95.554 2 -1.4116749451772657 0.39682201635135295 1.0 ['ENSG00000111321|ENST00000228918|LTBR', 'nc|ENSG00000111321|P36941-2|LTBR'] 30296 16457 GAARGRKL True NCI_RA007_Epitope_Rep2 827.5089687325899 827.5084249679301 68.742 1 -1.411680771904884 0.3968291528632276 1.0 ['ENST00000461325.1_1_3:52550393-52550435:+|nuORF'] 62264 19369 LLQFFFQKQP True NCI_RA007_Epitope_Rep4 1294.7073937556197 1294.70628993586 83.767 2 -1.4117642670354373 0.39684812058541663 1.0 ['ENSG00000113119|ENST00000394671|TMCO6', 'nc|ENSG00000113119|Q96DC7-2|TMCO6', 'ENST00000515265.2_1_5:140022188-140024328:+|nuORF', 'ENST00000510336.5_1_5:140021201-140024680:+|nuORF'] 15938 5109 EDSPRKPP True PC9_epitope_Rep1 924.46649478392 924.46538993586 24.505 2 -1.4119033053285606 0.39685056138565833 1.0 ['nc|ENSG00000169994|Q6PIF6-2|MYO7B'] 107458 6501 SYWRVWIYWQ True NCI_RA007_Epitope_Rep5 1485.7193554216499 1485.71824993586 31.672 2 -1.4119353125751966 0.39685056138565833 1.0 ['ENST00000295992.7_1_3:142606565-142606607:-|nuORF'] 15810 10677 EDIHRLKERFE True NCI_RA007_Epitope_Rep5 1470.75792575834 1470.7568299358602 47.705 2 -1.4119792785107084 0.39688135914059913 1.0 ['ENSG00000104722|ENST00000221166|NEFM'] 107220 10940 SYPHLVSARP True PC9_epitope_Rep3 1125.59309227937 1125.59198993586 47.063 2 -1.4120330467612403 0.39690032534753034 1.0 ['ENST00000498526.1_1_2:130897068-130897428:-|nuORF'] 111519 11673 TLLRKEEK True PC9_epitope_Rep6 1015.6025943339099 1015.60148993586 56.03 2 -1.4120538288666808 0.3969172167411929 1.0 ['ENST00000518143.1_1_8:77524032-77524245:-|nuORF'] 134576 14101 WVTFIFLLFLF True NCI_RA007_Epitope_Rep1 1444.8158815754398 1444.81478993586 58.881 2 -1.4120678399491726 0.3969172167411929 1.0 ['ALB|p.S8F|1|0.43|ENSG00000163631|chr4:73404350-73404350|C/T|missense_variant'] 130813 5597 VVFASASIG True PC9_epitope_Rep1 849.45961849833 849.45852993586 26.357 2 -1.4121171824241363 0.3969172167411929 1.0 ['nc|ENSG00000101194|Q9BYT1-2|SLC17A9', 'ENSG00000101194|ENST00000370351|SLC17A9', 'ENST00000488738.5_1_20:61595350-61598131:+|nuORF'] 118297 7276 VDATHIGKL True H1975_Epitope_Rep3 952.5341804209198 952.53308993586 32.962 2 -1.4121303399966902 0.3969172167411929 1.0 ['ENSG00000124491|ENST00000264870|F13A1', 'KIF13A-F13A1|1|fusion'] 128745 19257 VSPSSLIP True NCI_RA007_Epitope_Rep5 798.44871946146 798.44762993586 80.937 2 -1.4121821514680712 0.3969172167411929 1.0 ['ENST00000409492.1_1_2:172950333-172951818:+|nuORF'] 78630 25272 PDVIAKNRIK True PC9_epitope_Rep2 1152.69789170108 1152.69737496793 102.88 1 -1.412200915599504 0.3969172167411929 1.0 ['ENSG00000136542|ENST00000259056|GALNT5'] 43142 24036 IGQALLVHARN True PC9_epitope_Rep2 1190.68838964654 1190.68728993586 97.956 2 -1.4122329856937983 0.3969172167411929 1.0 ['ENSG00000072840|ENST00000264956|EVC'] 115619 13041 TVISGHTS True H1975_Epitope_Rep2 800.4028318982001 800.40172993586 55.283 2 -1.412272762597494 0.3969172167411929 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C'] 112163 21421 TLVKMTWYD True PC9_epitope_Rep2 1155.56343194387 1155.56179490379 87.868 3 -1.4122731017788583 0.3969172167411929 1.0 ['ENST00000335420.9_1_7:129772789-129772981:+|nuORF'] 21193 23603 EREVVVRQLQQ True PC9_epitope_Rep2 1382.7630111387798 1382.7613649037899 96.259 3 -1.4123438936601926 0.3969433140910381 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26', 'nc|ENSG00000107890|Q9UPS8-2|ANKRD26'] 56915 17843 LEDRIDYL True PC9_epitope_Rep3 1035.52367530687 1035.52256993586 73.829 2 -1.4123606355980869 0.3969433140910381 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 66347 17122 LSQRVVLGL True PC9_epitope_Rep5 983.6127650947898 983.61166993586 70.88 2 -1.412387730550693 0.3969575812060848 1.0 ['nc|ENSG00000105711|Q07699-2|SCN1B'] 123371 7147 VIASAQPW True H1975_Epitope_Rep3 870.4599528515 870.45884993586 32.463 2 -1.4124059523570247 0.3969575812060848 1.0 ['ENST00000527348.1_1_11:65770323-65770707:+|nuORF', 'ENST00000530204.1_1_11:65770323-65770533:+|nuORF'] 8204 5469 ATGTIGTLLSA True NCI_RA007_Epitope_Rep5 1003.55497543515 1003.55386993586 27.722 2 -1.4124809512850567 0.3969671520327415 1.0 ['ENSG00000181408|ENST00000313135|UTS2R'] 129527 7739 VTFSRRFG True NCI_RA007_Epitope_Rep4 968.5191990631198 968.51865496793 36.444 1 -1.4124957733136037 0.3969671520327415 1.0 ['ENST00000300688.7_1_11:118272331-118272397:+|nuORF'] 91664 16575 RPFVPLAVT True NCI_RA007_Epitope_Rep3 998.5913013742198 998.59020993586 72.985 2 -1.412511277665267 0.3969671520327415 1.0 ['nc|ENSG00000196091|Q00872-5|MYBPC1', 'nc|ENSG00000196091|Q00872-9|MYBPC1', 'nc|ENSG00000196091|Q00872-8|MYBPC1', 'nc|ENSG00000196091|Q00872-10|MYBPC1', 'ENSG00000196091|ENST00000361466|MYBPC1', 'nc|ENSG00000196091|Q00872-3|MYBPC1', 'nc|ENSG00000196091|Q00872-7|MYBPC1', 'nc|ENSG00000196091|Q00872-2|MYBPC1', 'nc|ENSG00000196091|Q00872|MYBPC1', 'nc|ENSG00000196091|Q00872-6|MYBPC1'] 20900 5795 EQSSWFWRWL True H1975_Epitope_Rep1 1423.6673198487897 1423.6662299358602 27.363 2 -1.4125312494925975 0.39697202673132653 1.0 ['ENST00000339526.8_1_1:182360314-182360662:-|nuORF'] 8613 8364 AVAKDRMML True H1975_Epitope_Rep1 1033.5412570306498 1033.5401499358602 37.102 2 -1.4126371837729759 0.39697202673132653 1.0 ['ENSG00000047662|ENST00000265018|FAM184B'] 109261 17004 TGAFVGTPA True PC9_epitope_Rep4 819.4126683059098 819.41211496793 73.399 1 -1.4126874204162005 0.39697202673132653 1.0 ['ENSG00000108528|ENST00000225665|SLC25A11', 'ENST00000574710.1_1_17:4841038-4842521:-|nuORF', 'nc|ENSG00000108528|Q02978-2|SLC25A11'] 112351 21815 TMWAVLELGAE True NCI_RA007_Epitope_Rep5 1218.5954603481398 1218.59380490379 91.04 3 -1.4127087773303497 0.39697202673132653 1.0 ['nc|ENSG00000155463|Q15070-2|OXA1L', 'ENSG00000155463|ENST00000612549|OXA1L'] 68293 13142 LTRNDWRV True PC9_epitope_Rep5 1058.56212650426 1058.56102993586 55.554 2 -1.4127885164587013 0.3969909871549216 1.0 ['ENSG00000080007|ENST00000370336|DDX43'] 97140 5233 SFFFAYVGI True PC9_epitope_Rep4 1049.5222187548898 1049.52112993586 26.828 2 -1.412997053177068 0.39705725809313164 1.0 ['ENST00000545024.1_5:69806308-69808341:+|nuORF'] 10142 3781 CCCCCCSC True PC9_epitope_Rep1 826.10688658094 826.10578993586 19.459 2 -1.413012667420914 0.3970596931956617 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 90940 7796 RLFPYSQYYRW True PC9_epitope_Rep5 1577.77793292693 1577.7762749037902 34.933 3 -1.413017505916873 0.3970596931956617 1.0 ['ENSG00000198056|ENST00000338193|PRIM1', 'ENST00000548173.5_1_12:57140708-57146082:-|nuORF', 'ENST00000546761.5_1_12:57139854-57146049:-|nuORF'] 136088 25035 YGCHCGLG True NCI_RA007_Epitope_Rep1 808.2996297829599 808.2990849679301 103.61 1 -1.413158778671814 0.397090479006505 1.0 ['ENSG00000117215|ENST00000375105|PLA2G2D', 'nc|ENSG00000117215|Q9UNK4-2|PLA2G2D'] 3134 6940 AGDPPEPPRP True H1975_Epitope_Rep3 1031.50360856863 1031.5025099358602 31.656 2 -1.4133317964547616 0.3971685728140412 1.0 ['ENST00000368678.8_1_6:112041256-112194621:-|nuORF'] 121215 6546 VGGPFLPP True NCI_RA007_Epitope_Rep5 782.4326754744999 782.43212496793 31.842 1 -1.4135168796944233 0.3971875295676034 1.0 ['ENST00000216252.3_1_22:41856152-41856401:-|nuORF'] 140912 17767 YYWMTGYPQQL True PC9_epitope_Rep1 1448.6434731697198 1448.6418149037902 73.138 3 -1.4135320982876645 0.3971899614447572 1.0 ['ENSG00000178573|ENST00000326043|MAF', 'nc|ENSG00000178573|O75444|MAF'] 137921 9937 YPQWRRIH True PC9_epitope_Rep2 1154.6097454030198 1154.60864993586 43.553 2 -1.4135335197864531 0.3971899614447572 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 30768 10070 GAPEPEPEPE True PC9_epitope_Rep4 1050.4505699362599 1050.4494699358602 46.401 2 -1.4135976598044413 0.39723257051623206 1.0 ['ENSG00000188060|ENST00000465518|RAB42'] 85959 6032 QPEYRASVP True PC9_epitope_Rep2 1045.5192586327698 1045.5181699358602 28.596 2 -1.4137219445175047 0.3972633520980179 1.0 ['nc|ENSG00000253159|O60330-2|PCDHGA12', 'ENSG00000253159|ENST00000252085|PCDHGA12'] 72189 20909 MRRRLRLRRD True NCI_RA007_Epitope_Rep1 1426.8527867163798 1426.85113490379 85.572 3 -1.4137629998958774 0.39727048026774836 1.0 ['ENSG00000237172|ENST00000449549|B3GNT9'] 91478 19828 RNSSRTYLHY True NCI_RA007_Epitope_Rep5 1295.63708234967 1295.63542490379 83.179 3 -1.4138213566796998 0.397289434471014 1.0 ['ENST00000377865.6_1_13:67802483-67802531:-|nuORF'] 81388 21188 PPTSHFHVL True PC9_epitope_Rep2 1033.5345147740898 1033.5334099358602 86.955 2 -1.4138612071307015 0.39729656216369635 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'SMARCC2|p.K898Sfs*42|1|0.2|ENSG00000139613|chr12:56168124-56168124|T/-|frameshift_variant', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2', 'ENST00000549209.5_1_12:56565201-56568439:-|nuORF', 'ENST00000552931.1_1_12:56566100-56568508:-|nuORF'] 119401 13325 VEPAAGLPRPL True PC9_epitope_Rep2 1118.64479349906 1118.64368993586 56.527 2 -1.4140536875515561 0.39734872225441387 1.0 ['ENST00000491308.5_1_1:155580107-155580345:+|nuORF'] 62799 23109 LMFAPLHP True PC9_epitope_Rep6 924.4891448047999 924.48804993586 101.99 2 -1.4141256856713293 0.39734872225441387 1.0 ['ENST00000432854.5_1_7:44103291-44103480:+|nuORF'] 10933 8172 DAVPEVSPPP True H1975_Epitope_Rep3 1006.4971262058599 1006.49602993586 36.413 2 -1.4141369661142633 0.39734872225441387 1.0 ['ENST00000264716.8_1_2:28616261-28626983:+|nuORF'] 57894 5524 LEQIAAEQN True PC9_epitope_Rep5 1014.49818883502 1014.49708993586 26.255 2 -1.4141449924448377 0.39734872225441387 1.0 ['RALY|p.K216N|1|0.27|ENSG00000125970|chr20:34076805-34076805|G/T|missense_variant'] 18710 6869 ELDFYVKGMPI True H1975_Epitope_Rep3 1310.6580606046998 1310.6569699358602 31.381 2 -1.4142272173492345 0.3973511500029563 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 4927 5329 ALHAQRPP True H1975_Epitope_Rep3 888.49298431528 888.49188993586 25.57 2 -1.4142284600698065 0.3973511500029563 1.0 ['ENST00000307145.3_2_15:31664327-31664516:+|nuORF'] 42277 13238 IEIHEGNKIDS True PC9_epitope_Rep1 1253.62518025329 1253.6240899358602 55.785 2 -1.4143039143424774 0.3973582763758485 1.0 ['COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A'] 94382 11403 RYELLQEP True H1975_Epitope_Rep2 1046.53965972418 1046.53856993586 48.911 2 -1.4143277409531803 0.3973654025802027 1.0 ['ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7'] 109061 17681 TFDIARLTV True PC9_epitope_Rep6 1034.5760452328998 1034.57494993586 80.645 2 -1.4143693680621265 0.39737252861602496 1.0 ['ENST00000538437.5_1_11:72466777-72492157:-|nuORF', 'ENST00000535267.1_1_11:72470267-72492328:-|nuORF', 'ENSG00000214530|ENST00000334805|STARD10'] 119234 15333 VEKRRNPSKHY True NCI_RA007_Epitope_Rep2 1412.7636798451201 1412.7625899358602 64.339 2 -1.4144869734370416 0.39738678018209767 1.0 ['SH3PXD2A-OBFC1|2|fusion', 'SH3PXD2A-OBFC1|3|fusion'] 139175 5469 YSSSFAQHMR True PC9_epitope_Rep5 1212.53459142708 1212.5329349037902 26.047 3 -1.4144889756980743 0.39738678018209767 1.0 ['ENSG00000153896|ENST00000329285|ZNF599'] 84426 11048 QGGYGHPG True NCI_RA007_Epitope_Rep3 771.33000131111 771.32890993586 50.557 2 -1.41456157227595 0.3974175544808504 1.0 ['ENST00000506481.1_1_4:125356953-125357223:-|nuORF'] 64657 13251 LRIHTKEKPCD True PC9_epitope_Rep4 1338.70780476178 1338.7061549037899 58.868 3 -1.4146797589827618 0.3974201328950791 1.0 ['nc|ENSG00000274349|Q5TYW1-2|ZNF658', 'ENSG00000274349|ENST00000621410|ZNF658', 'ENST00000377618.4_9:39444499-39464431:-|nuORF', 'nc|ENSG00000198416|Q4V348|ZNF658B', 'ENST00000602828.1_9:39444499-39446956:-|nuORF'] 13244 4583 DLVFPWFVFI True H1975_Epitope_Rep3 1281.6797820254499 1281.6781349037901 22.75 3 -1.414694833217981 0.3974201328950791 1.0 ['nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT'] 45035 23732 IQNGRFRREFV True PC9_epitope_Rep1 1420.76876522556 1420.76710490379 96.078 3 -1.4147268112238698 0.3974201328950791 1.0 ['ENST00000444316.2_2_4:102791758-102816466:+|nuORF'] 39001 21838 HKEKLWFVP True PC9_epitope_Rep1 1182.6549642599398 1182.65332490379 88.809 3 -1.41474032305216 0.3974201328950791 1.0 ['ENSG00000115594|ENST00000410023|IL1R1'] 18320 20607 EIVEEKQGWV True PC9_epitope_Rep5 1215.6135529404298 1215.61244993586 84.313 2 -1.41479590381629 0.3974201328950791 1.0 ['ENST00000437451.1_1:144598756-144607180:+|nuORF'] 129588 13633 VTGNAKAG True NCI_RA007_Epitope_Rep5 716.3817025308 716.38115496793 59.124 1 -1.4148594673679127 0.3974201328950791 1.0 ['ENST00000507587.1_1_5:176965994-176980212:-|nuORF'] 55900 14078 LDGKLLRTEPA True NCI_RA007_Epitope_Rep1 1211.68738658703 1211.68628993586 58.79 2 -1.4148777714028566 0.3974201328950791 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1'] 121934 13441 VGPPVWPREE True PC9_epitope_Rep4 1164.5927579262 1164.59110490379 59.6 3 -1.414950011367418 0.39742725735702716 1.0 ['ENST00000232854.8_1_3:50606980-50608690:+|nuORF', 'ENST00000424388.1_1_3:50607184-50608690:+|nuORF', 'ENST00000482974.1_1_3:50608300-50608690:+|nuORF'] 118642 21150 VEAPPRRRL True PC9_epitope_Rep5 1092.651610215 1092.65050993586 86.407 2 -1.4149973210406026 0.3974343816505084 1.0 ['ENST00000467719.5_1_11:2937762-2940985:+|nuORF'] 36516 12096 GVKKLFIF True NCI_RA007_Epitope_Rep4 950.5953241254998 950.59422993586 53.525 2 -1.4151850748320818 0.3974769747342784 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 85669 12466 QLQQQNLEHL True H1975_Epitope_Rep1 1249.64149902377 1249.6404099358601 52.988 2 -1.4152594568724532 0.39747939893359185 1.0 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 129914 16888 VTLTSIVP True PC9_epitope_Rep3 828.49566965388 828.49456993586 70.115 2 -1.4152607360598668 0.39747939893359185 1.0 ['ENSG00000165912|ENST00000298838|PACSIN3'] 81072 22127 PPEPADLPLP True PC9_epitope_Rep5 1044.54916177872 1044.5480699358602 90.146 2 -1.415322412460271 0.3974983448406318 1.0 ['ENSG00000130052|ENST00000374599|STARD8', 'nc|ENSG00000130052|Q92502|STARD8'] 88797 15531 RDQRHWRPWRP True NCI_RA007_Epitope_Rep2 1588.8235947630799 1588.8224899358602 65.118 2 -1.4153935138383003 0.39750546787255425 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 58672 20495 LFHWRTRLRRK True NCI_RA007_Epitope_Rep2 1567.93241693607 1567.93130993586 84.794 2 -1.415402933898261 0.3975125907360556 1.0 ['ENST00000560110.1_1_15:44968687-44968816:-|nuORF', 'ENST00000558573.1_1_15:44968687-45003294:-|nuORF'] 99129 16419 SLAHPAPII True PC9_epitope_Rep1 917.5334521449299 917.53234993586 67.98 2 -1.4155154657211468 0.3975221364480015 1.0 ['nc|ENSG00000047849|P27816-3|MAP4'] 28126 22192 FRICNLTRP True PC9_epitope_Rep4 1118.60188314126 1118.6007899358601 93.607 2 -1.4155316384960377 0.3975221364480015 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 45519 10794 ISFARCFTQC True NCI_RA007_Epitope_Rep1 1174.5263352425 1174.5252299358601 45.98 2 -1.4155488060920507 0.3975221364480015 1.0 ['OR5M11|p.G95R|1|0.16|ENSG00000255223|chr11:56542975-56542975|C/G|missense_variant'] 117973 10189 VASALHTSS True H1975_Epitope_Rep3 871.4399456829102 871.43884993586 44.237 2 -1.415586650558814 0.39752455935028547 1.0 ['ENSG00000134046|ENST00000256429|MBD2', 'ENST00000578272.1_1_18:51686149-51714116:-|nuORF'] 68942 25970 LVFRKPRGLFI True PC9_epitope_Rep5 1344.8394109846797 1344.83776490379 105.43 3 -1.4156282988943931 0.39752455935028547 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 89236 8394 REIWHYQYLSW True PC9_epitope_Rep2 1579.75719748235 1579.7555549037902 37.66 3 -1.4157027976356038 0.39754137115839244 1.0 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'nc|ENSG00000111679|P29350-2|PTPN6', 'ENST00000416215.6_1_12:7061038-7070080:+|nuORF'] 81096 20303 PPGGGSGG True NCI_RA007_Epitope_Rep2 584.25543938852 584.25489496793 84.004 1 -1.4157098404683095 0.39754137115839244 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.H598Tfs*38|1|0.13|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant', 'IRS1|p.Q1064Tfs*17|1|0.18|ENSG00000169047|chr2:226795553-226795554|-/C|frameshift_variant'] 115996 4364 TVQSLNNHL True NCI_RA007_Epitope_Rep5 1024.53015766964 1024.5290699358602 23.4 2 -1.4157245440839668 0.39754137115839244 1.0 ['ENST00000396959.2_1_3:12829511-12830132:-|nuORF'] 29505 25778 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 106.68 3 -1.4157357815299008 0.39754137115839244 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 107818 4331 TAQKSPRTLT True NCI_RA007_Epitope_Rep4 1101.61422164677 1101.6131299358601 23.004 2 -1.4158001589435907 0.39754137115839244 1.0 ['nc|ENSG00000187144|Q7Z572-2|SPATA21', 'ENSG00000187144|ENST00000335496|SPATA21'] 124876 23303 VLLLVPPLIKP True H1975_Epitope_Rep2 1200.8209669558798 1200.8198699358602 96.102 2 -1.4158152614998043 0.39754137115839244 1.0 ['OR51A2|p.M288I|1|0.65|ENSG00000205496|chr11:4954850-4954850|C/T|missense_variant'] 79049 19778 PFREARKR True NCI_RA007_Epitope_Rep4 1058.6097454030198 1058.60864993586 85.477 2 -1.4158531309248974 0.39754137115839244 1.0 ['nc|ENSG00000132669|Q8WYP3-2|RIN2'] 128704 16527 VSPASFENV True PC9_epitope_Rep2 948.45526139388 948.45471496793 68.811 1 -1.4158583063864185 0.39754137115839244 1.0 ['ENSG00000169750|ENST00000306897|RAC3', 'ENSG00000136238|ENST00000348035|RAC1', 'nc|ENSG00000136238|P63000-2|RAC1', 'ENST00000488373.5_1_7:6415539-6442074:+|nuORF', 'RAC1|p.S83P|1|0.15|ENSG00000136238|chr7:6400147-6400147|T/C|missense_variant'] 121276 4907 VGGWWGGW True PC9_epitope_Rep2 903.4027723285499 903.40166993586 24.241 2 -1.4158609458792866 0.39754137115839244 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 74969 6118 NLVPGDPR True NCI_RA007_Epitope_Rep1 866.46101548066 866.45990993586 27.835 2 -1.4159043163103762 0.3975556133424742 1.0 ['ENST00000464676.5_1_3:133669982-133717557:-|nuORF', 'ENSG00000174640|ENST00000310926|SLCO2A1'] 25268 5184 FEDKLSSIPL True NCI_RA007_Epitope_Rep4 1147.61249031127 1147.6108349037902 26.469 3 -1.415932842753064 0.3975556133424742 1.0 ['ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 29504 25690 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 106.32 3 -1.4161294428551616 0.39758167462531324 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 70455 17717 LYRPPHRRFHW True NCI_RA007_Epitope_Rep5 1563.83236854163 1563.83126993586 74.93 2 -1.4161375612987412 0.39758167462531324 1.0 ['PCDHGA8|p.P565Lfs*24|2|0.37|ENSG00000253767|chr5:141394507-141394508|CC/T|frameshift_variant'] 57323 16419 LEGQEIQVKAK True PC9_epitope_Rep6 1241.69795127073 1241.6968499358602 75.56 2 -1.4162378266066196 0.3976006146208853 1.0 ['ENSG00000033030|ENST00000633063|ZCCHC8'] 65390 8516 LSEREFDP True H1975_Epitope_Rep1 991.4610750503099 991.45996993586 37.686 2 -1.4164161524756849 0.39762667391586987 1.0 ['ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1', 'nc|ENSG00000163635|O15265-3|ATXN7', 'ATXN7|p.K789Qfs*11|1|0.27|ENSG00000163635|chr3:63996184-63996185|-/T|frameshift_variant', 'ENST00000474112.5_1_3:63898274-63982174:+|nuORF', 'ENSG00000163635|ENST00000674280|ATXN7', 'nc|ENSG00000163635|O15265-2|ATXN7', 'ENST00000472910.5_1_7:105260689-105318420:-|nuORF'] 139080 23345 YSLVRNRSRR True NCI_RA007_Epitope_Rep4 1305.73779945045 1305.73615490379 101.36 3 -1.4164188189555424 0.39762667391586987 1.0 ['S1PR1|p.T230N|1|0.31|ENSG00000170989|chr1:101239673-101239673|C/A|missense_variant'] 25303 14193 FEEKHRRDF True NCI_RA007_Epitope_Rep1 1262.6156186290998 1262.6145299358602 59.244 2 -1.4164252888303106 0.3976290938316255 1.0 ['ENST00000396060.6_1_15:59931232-59931334:-|nuORF'] 118238 9244 VAYWGTGD True PC9_epitope_Rep5 867.3762827971899 867.37518993586 40.504 2 -1.4164722380677754 0.3976290938316255 1.0 ['ALDH3A1|p.G306W|1|0.19|ENSG00000108602|chr17:19740369-19740369|C/A|missense_variant'] 44151 17186 ILPQAATP True PC9_epitope_Rep1 809.4647038787699 809.4641549679301 70.926 1 -1.416580558348621 0.397633933319939 1.0 ['ENST00000488252.6_1_19:19287863-19288136:-|nuORF'] 81725 4464 PSAGNLHPSLK True NCI_RA007_Epitope_Rep5 1119.6036569630699 1119.60254993586 23.816 2 -1.4166043796540688 0.397633933319939 1.0 ['ENST00000521506.1_1_5:171682090-171682429:-|nuORF'] 77726 16194 PAAKTRKQ True NCI_RA007_Epitope_Rep3 898.5348491272598 898.5343049679301 71.392 1 -1.4166240989025498 0.397633933319939 1.0 ['ENSG00000206181|ENST00000332567|ELOA2'] 66255 9685 LSQALIQSLA True PC9_epitope_Rep2 1042.60225998074 1042.60116993586 42.593 2 -1.416636766809493 0.397633933319939 1.0 ['ENSG00000196132|ENST00000328439|MYT1', 'nc|ENSG00000196132|Q01538-2|MYT1'] 58683 16761 LFIFRIMIL True NCI_RA007_Epitope_Rep5 1164.7093083319198 1164.7082099358602 71.233 2 -1.4166774335453045 0.39765287068333843 1.0 ['ENSG00000165474|ENST00000382848|GJB2'] 118038 8586 VATFRKNN True NCI_RA007_Epitope_Rep4 948.51411368268 948.5130099358599 39.809 2 -1.4167438431568735 0.39769074406731586 1.0 ['ENSG00000182173|ENST00000333213|TSEN54', 'ENST00000545228.2_1_17:73518583-73520490:+|nuORF'] 31774 9941 GELMFMERY True H1975_Epitope_Rep3 1174.5151018524598 1174.51457496793 43.27 1 -1.4167441664669636 0.39769074406731586 1.0 ['nc|ENSG00000072121|Q68DK2-5|ZFYVE26', 'nc|ENSG00000072121|Q68DK2-2|ZFYVE26', 'ENSG00000072121|ENST00000347230|ZFYVE26', 'ENST00000554523.5_1_14:68228796-68282710:-|nuORF', 'ENST00000554557.5_1_14:68248216-68272009:-|nuORF'] 36623 14913 GVLLMIPF True PC9_epitope_Rep4 888.51429692348 888.5131899358599 65.304 2 -1.4167827912850985 0.39770498002789006 1.0 ['ENSG00000181009|ENST00000641181|OR52N5'] 76378 26076 NSIINTPLK True PC9_epitope_Rep1 998.5760452329 998.57494993586 105.55 2 -1.416784049594 0.39770498002789006 1.0 ['nc|ENSG00000112701|Q9GZR1-2|SENP6', 'ENSG00000112701|ENST00000447266|SENP6'] 129852 8664 VTLKDVFGAY True NCI_RA007_Epitope_Rep2 1111.5913609438699 1111.59026993586 38.347 2 -1.4168269111708798 0.397707397778303 1.0 ['ENSG00000160868|ENST00000651514|CYP3A4'] 53039 20409 KRWEEPKELPA True NCI_RA007_Epitope_Rep1 1381.7353994086097 1381.7343099358602 83.597 2 -1.4168785177818821 0.397707397778303 1.0 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'nc|ENSG00000244754|Q92802-3|N4BP2L2', 'ENST00000380121.7_1_13:33010521-33020605:-|nuORF'] 20867 4007 EQRFRVLWWRR True NCI_RA007_Epitope_Rep2 1630.8956970741797 1630.8946099358602 20.224 2 -1.417032988268731 0.39771250324928514 1.0 ['ENST00000307340.7_1_1:215963551-215972328:-|nuORF'] 61258 19080 LLDRRVRSLP True NCI_RA007_Epitope_Rep4 1223.74623887583 1223.7451499358601 82.54 2 -1.417094818266881 0.39771250324928514 1.0 ['ENST00000366254.2_1_3:172468880-172469961:+|nuORF'] 121278 4596 VGGWWGGW True PC9_epitope_Rep3 903.4027723285499 903.40166993586 22.776 2 -1.417110742420376 0.39771250324928514 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 14806 6997 DYATLFAARS True NCI_RA007_Epitope_Rep2 1113.5454733806098 1113.54436993586 31.838 2 -1.417115182387853 0.39771250324928514 1.0 ['ENSG00000187714|ENST00000374115|SLC18A3', 'SLC18A3|p.R351Lfs*98|1|0.21|ENSG00000187714|chr10:49611788-49611789|GC/-|frameshift_variant'] 65251 9239 LSEGQRPQL True PC9_epitope_Rep6 1026.5458077337798 1026.54470993586 45.689 2 -1.4172020793108937 0.39771250324928514 1.0 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 99036 4124 SKSWWRVRNSM True NCI_RA007_Epitope_Rep1 1435.7142871245499 1435.71265490379 20.115 3 -1.4172098016654067 0.39771250324928514 1.0 ['ENSG00000158092|ENST00000481752|NCK1', 'NCK1-IL20RB|3|fusion', 'ENST00000460960.1_1_3:136646843-136647104:+|nuORF', 'NCK1-IL20RB|1|fusion', 'NCK1-IL20RB|4|fusion'] 61523 20689 LLGARQMGVP True PC9_epitope_Rep1 1040.5800850675198 1040.5789899358601 84.404 2 -1.4172386244838893 0.39771250324928514 1.0 ['ENST00000560192.5_1_15:91447248-91454469:+|nuORF'] 121279 4470 VGGWWGGW True PC9_epitope_Rep5 903.4027723285499 903.40166993586 22.261 2 -1.4173042392782695 0.39771250324928514 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 79835 25996 PIFPWYAFQL True NCI_RA007_Epitope_Rep5 1280.65938093404 1280.65828993586 107.56 2 -1.4173425412084617 0.39771250324928514 1.0 ['ENST00000378088.1_1_9:35737475-35737712:-|nuORF'] 77930 21535 PAILLMFLA True PC9_epitope_Rep6 987.5827108364699 987.58216496793 95.708 1 -1.4173474856085453 0.39771250324928514 1.0 ['ENSG00000149488|ENST00000358864|TMC2'] 81104 20193 PPGPGGGG True H1975_Epitope_Rep3 594.2761748331 594.2756249679301 84.462 1 -1.4173488034686064 0.39771250324928514 1.0 ['ENSG00000198914|ENST00000361360|POU3F3', 'ENSG00000176160|ENST00000323777|HSF5'] 133862 7074 WMDQNTRRKRW True NCI_RA007_Epitope_Rep1 1575.7840980198698 1575.78300993586 31.51 2 -1.4173513004748488 0.39771250324928514 1.0 ['RASA1|p.L146Sfs*24|1|0.5|ENSG00000145715|chr5:87268885-87268897|CTTTGGGGGCGGG/-|frameshift_variant'] 103493 18668 SRAVARPL True H1975_Epitope_Rep2 868.52428444356 868.52318993586 77.485 2 -1.417353521871782 0.39771250324928514 1.0 ['ENST00000457926.5_1_16:90039026-90045221:+|nuORF', 'ENST00000423742.1_1_16:90039026-90044235:+|nuORF', 'ENST00000431757.5_2_16:90039026-90045221:+|nuORF', 'ENST00000418696.5_2_16:90039026-90046656:+|nuORF', 'ENST00000450026.1_1_16:90039026-90044235:+|nuORF'] 111274 17894 TLGVEDILVK True PC9_epitope_Rep4 1085.63322575585 1085.6321299358601 76.867 2 -1.4173941221347892 0.39771250324928514 1.0 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 92702 25358 RRHRRCRRR True PC9_epitope_Rep5 1350.7864384920597 1350.78534993586 102.75 2 -1.417451535951989 0.39773385162517577 1.0 ['ENSG00000184560|ENST00000333870|SPEM2'] 58831 14523 LFRGVFVHR True PC9_epitope_Rep6 1129.6508819390099 1129.64923490379 67.752 3 -1.4174524295346647 0.39773385162517577 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 90423 23276 RIPRPLRAHPG True PC9_epitope_Rep4 1268.7578066190397 1268.75670993586 97.783 2 -1.417483956351058 0.39773385162517577 1.0 ['ENST00000380094.9_1_10:5931597-5931837:-|nuORF'] 91356 6104 RMPWPRQQGW True NCI_RA007_Epitope_Rep1 1340.6560439724399 1340.65494993586 27.781 2 -1.4176257713742888 0.39774351704176264 1.0 ['ENST00000320934.7_1_11:117100310-117100430:-|nuORF'] 93796 16673 RTYRLRLEA True NCI_RA007_Epitope_Rep4 1176.6727395823998 1176.6716499358602 72.296 2 -1.4176331726261833 0.39774351704176264 1.0 ['ENSG00000162729|ENST00000314485|IGSF8', 'nc|ENSG00000162729|Q969P0-3|IGSF8', 'nc|ENSG00000162729|Q969P0-2|IGSF8'] 60832 24765 LKKMKMKKKT True NCI_RA007_Epitope_Rep5 1262.7930550392198 1262.7919499358602 102.75 2 -1.4177229824463906 0.39774351704176264 1.0 ['ENST00000553612.5_1_14:81651936-81658969:-|nuORF'] 15798 7561 EDGRESPSYDT True NCI_RA007_Epitope_Rep2 1254.5000393098198 1254.49894993586 34.036 2 -1.417740167088838 0.39774351704176264 1.0 ['ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'SLC4A7|p.G1175Efs*11|1|0.32|ENSG00000033867|chr3:27383192-27383192|C/-|frameshift_variant', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-10|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-14|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-11|SLC4A7', 'ENST00000428005.1_1_3:27465485-27525617:-|nuORF'] 134614 14825 WWFLHKFRIYP True H1975_Epitope_Rep1 1591.8452246411098 1591.84412993586 62.254 2 -1.4177531592569645 0.39774351704176264 1.0 ['nc|ENSG00000166262|Q96M60-2|FAM227B'] 26459 6582 FINRDLAHDS True NCI_RA007_Epitope_Rep5 1186.5730851107799 1186.57144490379 31.979 3 -1.4177752459256903 0.39774351704176264 1.0 ['ENST00000460438.5_1_7:13998579-14028701:-|nuORF', 'ENST00000483075.1_1_7:14014577-14028701:-|nuORF', 'nc|ENSG00000006468|P50549-3|ETV1', 'nc|ENSG00000006468|P50549-2|ETV1', 'ENSG00000006468|ENST00000430479|ETV1'] 99209 18535 SLAVPAKRRR True NCI_RA007_Epitope_Rep5 1152.7203584811598 1152.7192699358602 78.121 2 -1.417794919873979 0.39774351704176264 1.0 ['nc|nan|Q8N9M1-3|C19orf47', 'nc|nan|Q8N9M1-2|C19orf47', 'ENSG00000160392|ENST00000683109|C19orf47', 'nc|nan|Q8N9M1|C19orf47'] 34032 20193 GNLIVHQRIH True NCI_RA007_Epitope_Rep4 1185.67307393557 1185.67196993586 87.373 2 -1.4177984727719346 0.39774351704176264 1.0 ['ENSG00000256683|ENST00000243644|ZNF350', 'nc|ENSG00000176024|Q6PF04-2|ZNF613', 'ENSG00000176024|ENST00000293471|ZNF613'] 140008 13275 YVLDRDSL True PC9_epitope_Rep1 979.49746055903 979.49636993586 55.926 2 -1.4179486823702934 0.3977436503248671 1.0 ['ENSG00000181143|ENST00000397910|MUC16'] 123890 26264 VKGAKLHD True PC9_epitope_Rep5 866.4974009893799 866.49630993586 106.82 2 -1.4180408129684594 0.3977436503248671 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 19279 11550 ELLQRAAAGG True PC9_epitope_Rep2 984.5352430500798 984.53414993586 49.753 2 -1.4181419444731114 0.3977436503248671 1.0 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'ENST00000487875.5_1_15:91491769-91496943:+|nuORF', 'nc|ENSG00000140553|Q9H3U1-3|UNC45A', 'ENST00000471780.1_1_15:91493362-91496943:+|nuORF'] 45377 11895 ISDNAARVL True PC9_epitope_Rep5 957.52434401321 957.52324993586 50.751 2 -1.4181611051186125 0.3977436503248671 1.0 ['nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D'] 98184 10349 SIDNSVNKKDL True H1975_Epitope_Rep3 1231.64083031743 1231.63972993586 44.861 2 -1.4181719629739022 0.3977436503248671 1.0 ['ZNF770|p.K473Rfs*18|1|0.19|ENSG00000198146|chr15:34982017-34982017|T/-|frameshift_variant', 'ENSG00000198146|ENST00000356321|ZNF770'] 4974 20228 ALIQRWYRRYV True PC9_epitope_Rep4 1522.8521009267 1522.85100993586 85.947 2 -1.4182689707400284 0.397762578114848 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 16455 8177 EELQSGVDAA True H1975_Epitope_Rep2 1017.4614689731297 1017.4608749679301 36.403 1 -1.4186116077937727 0.39788782308746395 1.0 ['ENSG00000140575|ENST00000268182|IQGAP1', 'IQGAP1|p.P711Qfs*22|1|0.49|ENSG00000140575|chr15:90467544-90467544|T/-|frameshift_variant'] 16812 5737 EFLVIQVF True H1975_Epitope_Rep3 993.5535188831698 993.55242993586 27.097 2 -1.4187174777492557 0.3979044604044604 1.0 ['ENST00000579124.5_1_18:20495424-20516752:+|nuORF'] 106371 19978 SVSPVHHLQF True PC9_epitope_Rep2 1149.5930922793702 1149.59198993586 82.247 2 -1.4187176546240619 0.3979044604044604 1.0 ['ENST00000401766.6_2_17:28530304-28534780:-|nuORF'] 65935 13236 LSLLGVLGSG True PC9_epitope_Rep2 914.54368247546 914.54258993586 56.189 2 -1.4187185943109484 0.3979044604044604 1.0 ['ENST00000449111.5_1_X:149108908-149110531:+|nuORF'] 101000 11349 SLTDDIKFF True H1975_Epitope_Rep2 1084.54407639828 1084.5429699358601 48.702 2 -1.4187535882142421 0.3979044604044604 1.0 ['CON__Q6IME9'] 18568 14247 EKWAQRSFRYY True H1975_Epitope_Rep2 1532.75244645508 1532.7513499358602 59.95 2 -1.4190934685350134 0.39801800099218065 1.0 ['nc|ENSG00000131779|O96011-2|PEX11B', 'ENSG00000131779|ENST00000369306|PEX11B'] 15045 7733 EAAERSRAEAL True NCI_RA007_Epitope_Rep1 1201.6051135150499 1201.6040099358602 34.073 2 -1.4190968329211024 0.39801800099218065 1.0 ['ENSG00000105617|ENST00000222224|LENG1'] 16813 10468 EFLVRSFRR True H1975_Epitope_Rep3 1208.6778249628398 1208.67616490379 45.327 3 -1.4191492681307178 0.39801800099218065 1.0 ['ENSG00000230778|ENST00000434396|ANKRD63'] 92950 22370 RRPRAPRRMRR True H1975_Epitope_Rep2 1506.9014682442996 1506.8998349037902 92.45 3 -1.4191534142989972 0.39801800099218065 1.0 ['ENST00000305850.9_1_16:81040477-81040603:+|nuORF'] 92983 19403 RRQRLEEAK True H1975_Epitope_Rep1 1184.6738022115599 1184.6727099358602 80.814 2 -1.4191904665635109 0.39801800099218065 1.0 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 137785 23103 YPALIPIT True NCI_RA007_Epitope_Rep3 886.51640509846 886.51530993586 100.38 2 -1.4191907869426883 0.39801800099218065 1.0 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 58898 21686 LFTTKEKL True PC9_epitope_Rep1 978.57498260374 978.57388993586 88.243 2 -1.4192996044281887 0.39802763670721625 1.0 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15'] 133733 25433 WLKVGAGV True PC9_epitope_Rep2 828.4857736765198 828.4852249679301 103.51 1 -1.4193030378904556 0.39802763670721625 1.0 ['nc|ENSG00000164659|A8MWY0-3|ELAPOR2', 'ENSG00000164659|ENST00000450689|ELAPOR2', 'nc|ENSG00000164659|A8MWY0-2|ELAPOR2'] 121708 5799 VGLPSEASSCP True PC9_epitope_Rep1 1045.47501086229 1045.47390993586 27.122 2 -1.4193530822255633 0.39802763670721625 1.0 ['ENST00000439032.4_1_10:64575724-64578399:-|nuORF'] 19045 7953 ELGPAHRHLKT True NCI_RA007_Epitope_Rep1 1257.69420330297 1257.69256490379 34.929 3 -1.4194136521484428 0.39802763670721625 1.0 ['ENST00000564098.5_1_16:1794388-1794685:+|nuORF'] 19012 20906 ELGHVVGFWHE True NCI_RA007_Epitope_Rep5 1308.6251206836398 1308.6234749037899 87.411 3 -1.4194597859003895 0.39802763670721625 1.0 ['MED20-TLL2|1|fusion', 'ENSG00000095587|ENST00000357947|TLL2', 'ENST00000518656.5_1_8:22034120-22035374:+|nuORF', 'nc|ENSG00000168487|P13497-3|BMP1', 'TLL2|p.L355Cfs*37|2|0.47|ENSG00000095587|chr10:96410460-96410460|G/-|frameshift_variant', 'ENST00000518913.5_1_8:22034120-22058713:+|nuORF', 'nc|ENSG00000168487|P13497-4|BMP1', 'nc|ENSG00000168487|P13497-5|BMP1', 'nc|ENSG00000168487|P13497-2|BMP1', 'nc|ENSG00000168487|P13497-6|BMP1', 'ENST00000520982.5_1_8:22034120-22069238:+|nuORF', 'ENSG00000168487|ENST00000306385|BMP1'] 43539 23341 IIDWIPKTL True PC9_epitope_Rep4 1097.6484818971699 1097.64738993586 98.039 2 -1.419504606284598 0.39802763670721625 1.0 ['NAV3|p.W2221L|1|0.54|ENSG00000067798|chr12:78199478-78199478|G/T|missense_variant'] 118204 6044 VAWPRDRRK True PC9_epitope_Rep1 1182.67340828874 1182.67177490379 28.061 3 -1.4195099508957825 0.39802763670721625 1.0 ['nc|ENSG00000070047|Q9P1Y6-2|PHRF1', 'nc|ENSG00000070047|Q9P1Y6-3|PHRF1', 'ENSG00000070047|ENST00000264555|PHRF1'] 113447 5510 TQPDARLTAYV True H1975_Epitope_Rep2 1233.63535101417 1233.6337049037902 26.206 3 -1.4195123527834157 0.39802763670721625 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000532739.1_1_16:16450692-16458759:+|nuORF', 'ENST00000532415.5_1_16:18480742-18495490:-|nuORF'] 95717 14085 SCCAGSST True NCI_RA007_Epitope_Rep4 714.23127543962 714.2307249679301 61.46 1 -1.4195433424038222 0.3980347462531445 1.0 ['ENSG00000132464|ENST00000396073|ENAM'] 68442 10890 LTTPTKQL True PC9_epitope_Rep4 900.5280324113198 900.52692993586 49.655 2 -1.419617600585845 0.3980419712554767 1.0 ['ENSG00000131711|ENST00000296755|MAP1B'] 43160 6049 IGRSPQENLVP True H1975_Epitope_Rep1 1208.65133543148 1208.6502299358601 28.339 2 -1.4196486035988027 0.3980419712554767 1.0 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ATP13A1|p.P396Hfs*8|1|0.25|ENSG00000105726|chr19:19656080-19656080|G/-|frameshift_variant'] 49534 20348 KKGAGGGG True PC9_epitope_Rep3 630.34492309926 630.3443749679301 83.517 1 -1.4196697828864602 0.3980419712554767 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 56017 14865 LDKERAVL True PC9_epitope_Rep4 942.5498304850598 942.54872993586 65.115 2 -1.4197825385867182 0.3980419712554767 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 111468 12971 TLLGALGG True H1975_Epitope_Rep3 700.41194002992 700.41139496793 55.126 1 -1.4198126684174097 0.3980419712554767 1.0 ['ENST00000359451.6_1_6:110481915-110500819:-|nuORF', 'ENST00000392587.6_1_6:110448797-110500819:-|nuORF', 'ENST00000392588.5_1_6:110499922-110500924:-|nuORF'] 19134 9266 ELIPEFYYLP True NCI_RA007_Epitope_Rep2 1282.64854146682 1282.64744993586 40.653 2 -1.4198326977840965 0.3980419712554767 1.0 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'ENST00000503716.5_1_4:151186876-151502511:-|nuORF', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA', 'nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'nc|ENSG00000172915|Q8NFP9-3|NBEA'] 37639 9765 HADHHPHPH True PC9_epitope_Rep2 1083.4747084821902 1083.4736099358602 42.9 2 -1.4199081993751932 0.39806811204005477 1.0 ['ENSG00000184486|ENST00000328345|POU3F2', 'nc|ENSG00000184486|P20265-3|POU3F2', 'nc|ENSG00000184486|P20265-2|POU3F2'] 48130 25160 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 104.66 3 -1.4199169158136251 0.39806811204005477 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 29502 25526 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 105.64 3 -1.4199989504763832 0.39806811204005477 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 85209 23358 QKHKKKEAAL True H1975_Epitope_Rep1 1179.7087907379498 1179.70714490379 97.088 3 -1.4200496634298065 0.39806811204005477 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 46977 6790 IVNVVCPLPEE True NCI_RA007_Epitope_Rep1 1210.62676047642 1210.62566993586 30.419 2 -1.420074316978548 0.39806811204005477 1.0 ['ENSG00000278195|ENST00000610913|SSTR3'] 80952 22313 PNAKKRHGVI True PC9_epitope_Rep6 1118.66726027914 1118.6661699358601 98.798 2 -1.4201133824239502 0.39806811204005477 1.0 ['nc|ENSG00000143479|O43781-2|DYRK3', 'ENSG00000143479|ENST00000367109|DYRK3'] 72004 18831 MQELQKQAEL True NCI_RA007_Epitope_Rep5 1216.6121730414397 1216.61053490379 79.278 3 -1.4201163444536675 0.39806811204005477 1.0 ['nc|ENSG00000004838|O75800-2|ZMYND10', 'ENSG00000004838|ENST00000231749|ZMYND10'] 133064 10785 VYWGLGRLR True NCI_RA007_Epitope_Rep4 1118.6348975217 1118.6338099358602 48.332 2 -1.420195355232913 0.39808702839936233 1.0 ['ENST00000484442.5_1_X:110339628-110339947:+|nuORF'] 122152 7912 VGRISRAQYNA True PC9_epitope_Rep4 1233.65781779425 1233.65672993586 37.864 2 -1.4202706528472901 0.39811316299060123 1.0 ['STX11|p.A125G|1|0.37|ENSG00000135604|chr6:144187001-144187001|C/G|missense_variant'] 66161 20047 LSPELRCMP True PC9_epitope_Rep3 1044.5096225492 1044.50852993586 82.36 2 -1.420384013205139 0.39811316299060123 1.0 ['ENSG00000184560|ENST00000333870|SPEM2'] 129339 10289 VTDTGRYLCM-[Oxidation] True H1975_Epitope_Rep2 1173.51583050889 1173.51472993586 44.582 2 -1.4204155110207246 0.39811316299060123 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant', 'HMCN1-IGLL5|1|fusion'] 4042 10700 AHLSQETSHWR True NCI_RA007_Epitope_Rep1 1350.6428960061 1350.64178993586 45.611 2 -1.4204752350620935 0.39811316299060123 1.0 ['ENST00000519798.1_1_8:75897034-75924708:+|nuORF'] 37188 15774 GVTTSKPGV True PC9_epitope_Rep5 844.4654321547599 844.46432993586 65.667 2 -1.4204763945004522 0.39811316299060123 1.0 ['ENSG00000149564|ENST00000278927|ESAM', 'ENST00000485116.5_1_11:124623544-124626668:-|nuORF', 'ENST00000464067.1_1_11:124626431-124626668:-|nuORF'] 27149 14246 FLRRLERW True PC9_epitope_Rep2 1174.6723456595798 1174.67071490379 60.065 3 -1.4204947436848214 0.39811316299060123 1.0 ['ENST00000396060.6_1_15:59949671-59949710:-|nuORF'] 62207 16903 LLPQKYPFIF True NCI_RA007_Epitope_Rep3 1264.7219811906 1264.7208899358602 74.356 2 -1.420525296719392 0.39811316299060123 1.0 ['ENST00000517413.5_1_8:17503437-17511044:-|nuORF'] 54575 8706 LACGACGK True NCI_RA007_Epitope_Rep2 721.32511625481 721.3245649679301 38.512 1 -1.4205674177373078 0.3981320770311596 1.0 ['ENSG00000136367|ENST00000419474|ZFHX2'] 113074 12921 TPYDPRWMLAG True PC9_epitope_Rep4 1305.6175927750498 1305.61648993586 57.585 2 -1.4206039268221142 0.3981369979457392 1.0 ['nc|ENSG00000278540|Q13085-3|ACACA', 'nc|ENSG00000278540|Q13085-2|ACACA', 'nc|ENSG00000278540|Q13085|ACACA', 'ENSG00000278540|ENST00000616317|ACACA'] 36515 11787 GVKKLFIF True NCI_RA007_Epitope_Rep4 950.5953241254998 950.59422993586 52.312 2 -1.420608362932396 0.3981369979457392 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 57331 16422 LEGRSQWK True PC9_epitope_Rep1 1002.5246783663798 1002.52358993586 67.99 2 -1.4206092519418374 0.3981369979457392 1.0 ['ENST00000242848.8_2_13:46619177-46626639:-|nuORF'] 58215 8250 LESRTFIPCT True H1975_Epitope_Rep1 1165.58014463717 1165.5790499358602 36.676 2 -1.4206964030037301 0.3981369979457392 1.0 ['ENST00000258607.9_1_13:53050406-53050451:+|nuORF'] 60558 12245 LIQLRALCHQ True NCI_RA007_Epitope_Rep1 1193.6702970542499 1193.66918993586 51.599 2 -1.4207543394609072 0.3981369979457392 1.0 ['nc|ENSG00000198315|Q15776-2|ZKSCAN8', 'ENSG00000198315|ENST00000330236|ZKSCAN8'] 119471 5520 VEQAPSEPLDP True H1975_Epitope_Rep3 1180.5611830143998 1180.56008993586 26.28 2 -1.4207870587343499 0.3981369979457392 1.0 ['ENSG00000183208|ENST00000329600|GDPGP1'] 94344 19510 RWWWRRRRRHR True PC9_epitope_Rep3 1806.0151925569298 1806.01354490379 80.276 3 -1.4208477392238605 0.3981369979457392 1.0 ['ENST00000395136.6_2_1:70687096-70687432:+|nuORF', 'ENST00000475204.5_1_1:70687068-70687435:+|nuORF', 'ENST00000370951.5_1_1:70671397-70687435:+|nuORF', 'ENST00000463877.1_1_1:70671397-70687435:+|nuORF'] 95489 10994 SANHVEKIELP True H1975_Epitope_Rep1 1235.65100107831 1235.64990993586 47.251 2 -1.4208973054647929 0.3981369979457392 1.0 ['SLC24A2|p.A405S|1|0.21|ENSG00000155886|chr9:19576939-19576939|C/A|missense_variant'] 59754 9132 LGWKWIHE True PC9_epitope_Rep1 1067.55525021867 1067.55414993586 39.978 2 -1.4210142592099222 0.3981369979457392 1.0 ['nc|ENSG00000092969|P61812-2|TGFB2', 'ENSG00000092969|ENST00000366930|TGFB2', 'ENST00000479322.1_1_1:218607587-218614701:+|nuORF', 'ENSG00000105329|ENST00000221930|TGFB1'] 86540 23673 QRAPKPLPRV True NCI_RA007_Epitope_Rep4 1160.71421047156 1160.71310993586 102.67 2 -1.4210249662032817 0.3981441035146335 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 40303 20244 HRQRILQAIQL True NCI_RA007_Epitope_Rep2 1374.82080079842 1374.8191649037901 83.776 3 -1.4211831989850758 0.39819373118469986 1.0 ['ENST00000552245.5_1_12:99225710-99548222:-|nuORF', 'nc|ENSG00000185046|Q7Z6G8-8|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-10|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-7|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-2|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-5|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-4|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-3|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8-6|ANKS1B', 'nc|ENSG00000185046|Q7Z6G8|ANKS1B', 'ENSG00000185046|ENST00000683438|ANKS1B'] 41884 20383 IDWAHHFKKSP True H1975_Epitope_Rep1 1364.6989543302398 1364.6978499358602 84.772 2 -1.421184696602088 0.39819373118469986 1.0 ['ENST00000480769.5_1_1:185266844-185267009:-|nuORF'] 121275 4816 VGGWWGGW True PC9_epitope_Rep2 903.4027723285499 903.40166993586 23.893 2 -1.4212195477687408 0.3982008358321725 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 86894 17581 QRRRLSGH True NCI_RA007_Epitope_Rep5 1008.5689432201998 1008.56784993586 74.407 2 -1.4212598042209361 0.39820794031189866 1.0 ['CEP170|p.E755Rfs*62|2|0.13|ENSG00000143702|chr1:243165697-243165697|C/-|frameshift_variant'] 79614 18558 PGYPGEPL True PC9_epitope_Rep3 828.40176926904 828.40066993586 76.604 2 -1.42126935067748 0.39821274686876557 1.0 ['nc|ENSG00000181409|Q6ZMQ8-2|AATK', 'nc|ENSG00000181409|Q6ZMQ8-3|AATK', 'ENSG00000181409|ENST00000326724|AATK'] 34048 23023 GNQGRKMS True PC9_epitope_Rep1 876.4235844261199 876.42248993586 93.356 2 -1.4213667153633844 0.39821274686876557 1.0 ['ENST00000369936.2_1_1:109730792-109745631:+|nuORF', 'ENST00000369938.5_1_1:109730226-109745631:+|nuORF', 'nc|ENSG00000116299|Q6UXG2-3|ELAPOR1', 'ENST00000527996.5_1_1:109656894-109745573:+|nuORF', 'nc|ENSG00000116299|Q6UXG2-2|ELAPOR1', 'nc|ENSG00000116299|Q6UXG2-4|ELAPOR1', 'ENSG00000116299|ENST00000369939|ELAPOR1'] 56243 19384 LDPYYSNKK True H1975_Epitope_Rep2 1126.5658744720201 1126.56476993586 80.454 2 -1.4213936732028636 0.39821274686876557 1.0 ['SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A'] 91357 6147 RMPWPRQQGW True NCI_RA007_Epitope_Rep2 1340.6560439724399 1340.65494993586 28.519 2 -1.4214217887211098 0.39821274686876557 1.0 ['ENST00000320934.7_1_11:117100310-117100430:-|nuORF'] 44057 8639 ILLHFPLV True NCI_RA007_Epitope_Rep4 950.5953241254999 950.59422993586 40.013 2 -1.4216172368398488 0.3982293572566842 1.0 ['ENSG00000159337|ENST00000290472|PLA2G4D'] 76976 13494 NVRFSTIVRRR True H1975_Epitope_Rep1 1402.8269488080198 1402.82584993586 57.025 2 -1.4216517618319298 0.3982293572566842 1.0 ['ENSG00000120129|ENST00000239223|DUSP1'] 67981 9829 LTLRETWKQH True H1975_Epitope_Rep1 1310.70951901394 1310.70842993586 42.735 2 -1.4216686197994461 0.3982293572566842 1.0 ['nc|ENSG00000121775|Q9GZU3-4|TMEM39B', 'nc|ENSG00000121775|Q9GZU3-3|TMEM39B', 'ENST00000476968.5_1_1:32540652-32561345:+|nuORF', 'ENST00000468135.5_1_1:32542241-32568271:+|nuORF', 'ENSG00000121775|ENST00000336294|TMEM39B'] 63703 12354 LPQKYYWWFFQ True H1975_Epitope_Rep2 1604.7816213250396 1604.7805299358602 52.605 2 -1.4217216548016987 0.3982293572566842 1.0 ['ENST00000561220.6_1_15:45434150-45457096:+|nuORF', 'nc|ENSG00000137857|Q9NRD9-2|DUOX1', 'ENSG00000137857|ENST00000389037|DUOX1'] 58269 5174 LETDAMFRLEH True NCI_RA007_Epitope_Rep2 1360.64453579888 1360.64342993586 24.746 2 -1.4218358048761484 0.3982506669184825 1.0 ['ENSG00000104957|ENST00000221554|YJU2B', 'ENST00000587019.5_1_19:13869900-13872373:+|nuORF', 'ENST00000589096.1_1_19:13869843-13870239:+|nuORF', 'ENST00000593174.5_1_19:13869843-13873879:+|nuORF'] 111353 13191 TLIIQVMLVYF True H1975_Epitope_Rep1 1338.7621317504197 1338.76102993586 55.836 2 -1.4219504267680607 0.3982506669184825 1.0 ['ENST00000400151.6_1_4:728053-728236:+|nuORF'] 96672 6339 SENWGSPVST True H1975_Epitope_Rep2 1062.4618033263 1062.4607099358602 29.313 2 -1.4219569578925946 0.3982506669184825 1.0 ['ENST00000418983.1_1_6:29759532-29760213:-|nuORF'] 118586 9422 VEAESEQK True PC9_epitope_Rep1 918.4294405688598 918.42834993586 41.1 2 -1.4219647859929698 0.39825776980370403 1.0 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2'] 123047 10656 VGYRADGI True PC9_epitope_Rep1 849.4344663796498 849.43391496793 45.879 1 -1.4220011105053252 0.398260171622148 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1', 'ENST00000557314.5_1_14:20839728-20850189:-|nuORF'] 93995 17945 RVPRRGSRS True NCI_RA007_Epitope_Rep5 1069.62170706905 1069.62060993586 75.811 2 -1.4220134831135955 0.398260171622148 1.0 ['ENST00000533683.6_2_19:14199897-14200170:-|nuORF'] 65351 14170 LSENQHKKR True PC9_epitope_Rep4 1138.62070400954 1138.6196099358601 62.409 2 -1.4220609966768856 0.39826727414366986 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 18610 11302 ELAGWGSP True NCI_RA007_Epitope_Rep5 815.38136817763 815.3808149679301 50.119 1 -1.4222635636408802 0.39829798283819035 1.0 ['ENST00000477812.1_1_7:5569027-5569288:-|nuORF'] 110222 8307 TIEGKIGK True H1975_Epitope_Rep3 844.5018176634799 844.50072993586 36.937 2 -1.4222948643779743 0.3983286908077994 1.0 ['nc|ENSG00000165240|Q04656-5|ATP7A', 'ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A', 'ATP7A|p.G198C|2|0.21|ENSG00000165240|chrX:77988713-77988713|G/T|missense_variant'] 127865 25764 VRPAGPAA True H1975_Epitope_Rep2 737.41842239269 737.4178749679301 105.78 1 -1.4223934719099167 0.39843510279226757 1.0 ['ENST00000263511.8_1_1:16802353-16802998:-|nuORF'] 57538 10395 LEKSRLISG True PC9_epitope_Rep2 1001.5869442697699 1001.58637496793 45.306 1 -1.4224034246436206 0.39843510279226757 1.0 ['ENST00000337304.2_1_22:39917262-39917451:+|nuORF'] 17909 12385 EIDQLSRNLQN True H1975_Epitope_Rep1 1328.6684420476 1328.66734993586 52.672 2 -1.422433014953948 0.39843510279226757 1.0 ['ENSG00000163808|ENST00000326047|KIF15', 'nc|ENSG00000163808|Q9NS87-2|KIF15', 'nc|ENSG00000163808|Q9NS87-4|KIF15'] 97486 5298 SGLYITHHYY True H1975_Epitope_Rep3 1252.5876725457601 1252.58602490379 25.458 3 -1.4224883327725109 0.39843510279226757 1.0 ['ENSG00000101638|ENST00000315087|ST8SIA5', 'nc|ENSG00000101638|O15466-2|ST8SIA5'] 60813 18477 LKKIRELDGHI True PC9_epitope_Rep6 1320.78776933464 1320.78613490379 83.712 3 -1.4224978169314522 0.39843510279226757 1.0 ['MYH11|p.E1117D|1|0.37|ENSG00000133392|chr16:15735521-15735521|C/G|missense_variant'] 18074 9042 EIKEEQAQTGQ True NCI_RA007_Epitope_Rep2 1259.5993594282697 1259.5982699358601 39.773 2 -1.4225079866576644 0.39843510279226757 1.0 ['ENSG00000172789|ENST00000312492|HOXC5'] 19105 19448 ELIAAFKEHQQ True PC9_epitope_Rep1 1312.6775501793202 1312.67644993586 79.622 2 -1.422509918682489 0.39843510279226757 1.0 ['nc|ENSG00000125246|Q8N0X4-2|CLYBL', 'ENSG00000125246|ENST00000339105|CLYBL'] 121223 21142 VGGPNGGK True PC9_epitope_Rep4 684.35548778296 684.35493496793 89.486 1 -1.4225378048714516 0.39843510279226757 1.0 ['ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1'] 29514 25618 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 108.31 3 -1.4225544593984543 0.39843510279226757 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 121890 10049 VGPGLPGWGW True NCI_RA007_Epitope_Rep4 1024.5130510535198 1024.51194993586 45.499 2 -1.422557230269537 0.39843510279226757 1.0 ['ENST00000529076.1_1_11:102960023-102962823:-|nuORF'] 5147 14560 ALNPEEMRRRR True NCI_RA007_Epitope_Rep1 1426.75754891886 1426.75644993586 60.683 2 -1.422592593095729 0.3984375 1.0 ['ENSG00000025800|ENST00000373625|KPNA6'] 91462 2871 RNRLMRDMAQ True PC9_epitope_Rep1 1289.6444933125701 1289.6428349037901 15.641 3 -1.4226511333137835 0.3984375 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 15434 7611 EANDVWKAAE True NCI_RA007_Epitope_Rep3 1131.51965255559 1131.5185499358602 37.068 2 -1.4226742128475471 0.39843989709457384 1.0 ['nc|ENSG00000172262|P52739-2|ZNF131', 'ENSG00000172262|ENST00000682664|ZNF131'] 15912 6254 EDRKNEDL True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 29.453 2 -1.4226829586821679 0.39843989709457384 1.0 ['ENST00000517548.1_1_6:109409388-109415153:-|nuORF'] 122510 9845 VGSSKGRP True PC9_epitope_Rep2 786.4348007328199 786.43370993586 43.203 2 -1.4227535555744415 0.3984469960702864 1.0 ['nc|ENSG00000113108|O95704-3|APBB3'] 28348 11733 FSDFHDLCM True H1975_Epitope_Rep2 1113.42595249489 1113.42484993586 50.204 2 -1.422859808170974 0.39848949728581545 1.0 ['ENST00000309964.8_1_4:56294512-56294707:-|nuORF'] 98985 23969 SKKKGPRTP True H1975_Epitope_Rep2 997.6032630402499 997.60216993586 98.716 2 -1.4230416821592458 0.39850839617186484 1.0 ['nc|ENSG00000123200|Q5T200-2|ZC3H13', 'nc|ENSG00000123200|Q5T200|ZC3H13', 'ENSG00000123200|ENST00000679008|ZC3H13', 'ENST00000470308.1_1_13:46575591-46585648:-|nuORF'] 46460 11404 ITNDKGHLSKE True H1975_Epitope_Rep3 1240.6411646706 1240.64006993586 48.981 2 -1.4230882049868865 0.3985154940879375 1.0 ['ENST00000425843.1_1_X:120337248-120337797:-|nuORF'] 68789 11142 LVDPTLAPLT True NCI_RA007_Epitope_Rep1 1038.5961119711399 1038.5950099358602 47.339 2 -1.4232608656816161 0.39854858693728246 1.0 ['nc|ENSG00000176406|Q9UQ26-8|RIMS2', 'nc|ENSG00000176406|Q9UQ26-3|RIMS2', 'nc|ENSG00000176406|Q9UQ26-1|RIMS2', 'nc|ENSG00000176406|Q9UQ26|RIMS2', 'ENSG00000176406|ENST00000696799|RIMS2', 'nc|ENSG00000176406|Q9UQ26-7|RIMS2'] 47817 20725 IYSFAITLWQM True PC9_epitope_Rep2 1371.6896950861499 1371.6885899358601 85.156 2 -1.4232941929398162 0.39854858693728246 1.0 ['ENSG00000172680|ENST00000311923|MOS'] 80923 23140 PMKRCFKR True NCI_RA007_Epitope_Rep5 1064.5735602184398 1064.57246993586 96.261 2 -1.4233120257911103 0.39854858693728246 1.0 ['ENST00000490602.5_1_13:37598533-37607608:-|nuORF', 'nc|ENSG00000102710|Q8NEM7-2|SUPT20H', 'ENSG00000102710|ENST00000350612|SUPT20H', 'nc|ENSG00000102710|Q8NEM7-3|SUPT20H'] 15537 7140 EASERGHRCAR True H1975_Epitope_Rep1 1270.5949002678599 1270.59380993586 32.488 2 -1.4235576794180453 0.39856278098339765 1.0 ['ENST00000493776.1_1_19:12605931-12606006:-|nuORF'] 16139 8654 EEELAEIH True H1975_Epitope_Rep2 968.4450906329998 968.44454496793 38.247 1 -1.423612737452551 0.39856278098339765 1.0 ['nc|ENSG00000204410|O43196-4|MSH5', 'ENSG00000204410|ENST00000375750|MSH5', 'nc|ENSG00000204410|O43196-2|MSH5', 'nc|ENSG00000204410|O43196-3|MSH5', 'ENST00000463094.5_1_6:31708243-31711078:+|nuORF', 'ENST00000482280.1_1_6:31708243-31713997:+|nuORF'] 131498 18539 VVVDPGVI True PC9_epitope_Rep5 796.4694549060399 796.46834993586 76.333 2 -1.4237129653177472 0.39857697435957945 1.0 ['ENSG00000066084|ENST00000301180|DIP2B'] 41335 4175 IALETAMT True PC9_epitope_Rep4 848.43135514516 848.43024993586 22.413 2 -1.4237937192182868 0.39857697435957945 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13', 'nc|ENSG00000163629|Q12923-2|PTPN13'] 98739 19437 SIRRWAYQMFR True PC9_epitope_Rep5 1512.7772217342797 1512.7761299358601 79.814 2 -1.4239381446625594 0.3985840707964602 1.0 ['ACACB|p.E285Q|1|0.24|ENSG00000076555|chr12:109167962-109167962|G/C|missense_variant'] 81522 2737 PQTMKLTLGH True H1975_Epitope_Rep2 1124.60121443492 1124.59957490379 14.585 3 -1.4240292389086837 0.3986029663366804 1.0 ['ENSG00000248713|ENST00000511828|C4orf54'] 59679 20454 LGTGILASVHC True PC9_epitope_Rep5 1069.55901526977 1069.5579099358602 83.712 2 -1.4242142058145408 0.39862903796691757 1.0 ['ENSG00000186910|ENST00000334708|SERPINA11'] 101359 6578 SMHASSNGG True NCI_RA007_Epitope_Rep3 846.32901533494 846.32790993586 32.924 2 -1.4242303129842746 0.39862903796691757 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF', 'ENST00000608673.1_1_1:172538260-172539320:+|nuORF'] 105863 15121 SVKLPVLKV True PC9_epitope_Rep5 981.6586526580498 981.65754993586 63.169 2 -1.424239588558412 0.39862903796691757 1.0 ['ENST00000592024.1_1_17:40253781-40254356:-|nuORF', 'ENSG00000108771|ENST00000251642|DHX58'] 139694 20335 YTTGEMLSL True PC9_epitope_Rep2 1013.4739482331299 1013.47284993586 83.642 2 -1.4242441779149018 0.39862903796691757 1.0 ['ENSG00000118298|ENST00000369111|CA14'] 8450 4940 ATSPRAPAP True H1975_Epitope_Rep2 866.4610154806599 866.45990993586 24.085 2 -1.4243235722001488 0.39862903796691757 1.0 ['ENST00000589123.5_2_19:3463128-3463455:+|nuORF'] 98367 12325 SIHLQRWDKYS True PC9_epitope_Rep4 1431.7258973540702 1431.72480993586 55.218 2 -1.4243457078599728 0.39862903796691757 1.0 ['ENST00000495197.1_1_10:38368986-38369799:-|nuORF'] 107871 7067 TASKQMSEKIR True NCI_RA007_Epitope_Rep1 1277.6761702803299 1277.6750699358602 31.483 2 -1.4243500384792571 0.39862903796691757 1.0 ['nc|ENSG00000154305|Q5JRA6-2|MIA3', 'ENSG00000154305|ENST00000344922|MIA3', 'ENST00000470521.1_1_1:222791452-222819114:+|nuORF'] 44428 13861 INILSRLPETL True H1975_Epitope_Rep1 1267.7499868435898 1267.74888993586 58.465 2 -1.4244216942910253 0.39863613303601975 1.0 ['ENST00000540037.5_2_12:6464995-6472854:-|nuORF', 'ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'nc|ENSG00000111319|P37088-4|SCNN1A'] 121267 5933 VGGVQGKR True PC9_epitope_Rep3 799.46643521427 799.46532993586 27.881 2 -1.4245115298905537 0.39864322793770646 1.0 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1'] 80193 17737 PLAFLTSNPGH True PC9_epitope_Rep1 1152.5927579262 1152.59110490379 73.024 3 -1.4245775172637132 0.3986692149784101 1.0 ['nc|ENSG00000156299|Q13009-2|TIAM1', 'ENSG00000156299|ENST00000541036|TIAM1'] 134234 12832 WRRREEEERWR True NCI_RA007_Epitope_Rep1 1686.8451180532998 1686.8440299358601 53.903 2 -1.4245830347499755 0.3986692149784101 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 83667 8911 QEAHWVLCEVL True PC9_epitope_Rep4 1325.6438075228898 1325.64270993586 41.813 2 -1.4247597655733972 0.39868109051871603 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 137766 4662 YNRSEATTAP True PC9_epitope_Rep3 1108.51490152832 1108.51380993586 23.024 2 -1.4248365181253682 0.39868109051871603 1.0 ['ENSG00000163251|ENST00000295417|FZD5'] 17920 4081 EIEAKRDDP True NCI_RA007_Epitope_Rep2 1071.5196525555898 1071.5185499358602 20.513 2 -1.4248470285641743 0.39868109051871603 1.0 ['ENST00000470137.5_1_13:44398084-44434086:-|nuORF'] 59260 8933 LGGQGHGG True H1975_Epitope_Rep1 681.3194366274099 681.3188849679301 39.266 1 -1.4248611620395355 0.39868109051871603 1.0 ['ENST00000470306.5_1_1:156126086-156128580:+|nuORF'] 13113 13655 DLSKEERLWEV True H1975_Epitope_Rep1 1402.7092442304202 1402.70814993586 57.657 2 -1.4249323395811482 0.39868109051871603 1.0 ['ENSG00000017797|ENST00000383432|RALBP1'] 98676 15414 SIQKFEEEISN True H1975_Epitope_Rep3 1322.6354105838197 1322.63430993586 64.701 2 -1.4250016586624825 0.3987117780294451 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 56814 6103 LECELSGTPPF True PC9_epitope_Rep4 1191.54817580255 1191.54706993586 30.485 2 -1.4251615532940858 0.39872365021881967 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant'] 78251 6481 PAREQKCWRHW True NCI_RA007_Epitope_Rep2 1495.72552051459 1495.7238749037901 29.819 3 -1.425179878827999 0.39872365021881967 1.0 ['ENST00000439313.5_1_2:165693974-165697706:-|nuORF'] 65616 11941 LSGLPDTVFEI True PC9_epitope_Rep6 1189.6230549949698 1189.6219499358601 57.177 2 -1.4252547489521055 0.39872365021881967 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 51912 5469 KKSETERK True NCI_RA007_Epitope_Rep5 1004.5614577979198 1004.56036993586 27.722 2 -1.425299247674891 0.39872365021881967 1.0 ['ENST00000312438.7_1_11:67141097-67141175:-|nuORF'] 57782 15301 LEPDPKLRATA True PC9_epitope_Rep1 1209.67173652289 1209.67062993586 63.676 2 -1.425309767373363 0.39872365021881967 1.0 ['nc|ENSG00000127564|Q99640-4|PKMYT1', 'nc|ENSG00000127564|Q99640-2|PKMYT1', 'nc|ENSG00000127564|Q99640-3|PKMYT1', 'PKMYT1|p.F483Lfs*14|1|0.54|ENSG00000127564|chr16:2973004-2973004|A/-|frameshift_variant', 'ENSG00000127564|ENST00000262300|PKMYT1', 'ENST00000575981.1_1_16:3022956-3024767:-|nuORF'] 89553 21676 RERRLQIWYRR True NCI_RA007_Epitope_Rep1 1630.9280598316197 1630.9269699358601 88.714 2 -1.4253381284042916 0.3987307429164602 1.0 ['ENSG00000115286|ENST00000233627|NDUFS7'] 72162 20839 MRKWPRQYEWF True NCI_RA007_Epitope_Rep2 1625.79253744525 1625.79144993586 86.19 2 -1.425541372597393 0.39876381565754865 1.0 ['ENSG00000175874|ENST00000324768|CREG2', 'TLK1-CREG2|2|fusion', 'TLK1-CREG2|1|fusion', 'TLK1-CREG2|3|fusion'] 47129 12981 IWEEAYQR True H1975_Epitope_Rep3 1093.5192586327698 1093.5181699358602 55.166 2 -1.4255541031870564 0.39876381565754865 1.0 ['ENST00000496676.5_1_1:6272096-6272816:+|nuORF', 'ENST00000492476.1_1_1:6271125-6272816:+|nuORF', 'nc|ENSG00000158286|Q6ZRF8-4|RNF207', 'ENSG00000158286|ENST00000377939|RNF207'] 37869 3422 HDYHRDLYNHL True NCI_RA007_Epitope_Rep2 1481.68000979081 1481.67835490379 17.967 3 -1.4255907571718436 0.39876381565754865 1.0 ['nc|ENSG00000136111|O60343-2|TBC1D4', 'nc|ENSG00000136111|O60343-3|TBC1D4', 'ENSG00000136111|ENST00000377636|TBC1D4', 'nc|ENSG00000136111|O60343-4|TBC1D4', 'nc|ENSG00000136111|O60343-5|TBC1D4', 'ENST00000475531.1_1_4:38117521-38119821:+|nuORF', 'ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1', 'ENST00000401554.5_1_4:38112345-38138953:+|nuORF', 'ENST00000407365.5_1_4:38113700-38138953:+|nuORF'] 80610 14329 PLPGSRRE True PC9_epitope_Rep3 910.49846361854 910.49736993586 60.202 2 -1.4257039099413327 0.39880629408572976 1.0 ['ENST00000344450.9_1_6:292292-292409:+|nuORF'] 80346 9140 PLGEGLLLNK True NCI_RA007_Epitope_Rep4 1052.62299542532 1052.62188993586 41.996 2 -1.4257331131851663 0.39881338539024996 1.0 ['ENST00000537045.5_1_22:19024489-19024732:-|nuORF'] 126236 11796 VPGWHPMA True PC9_epitope_Rep4 893.4217935209699 893.42068993586 53.142 2 -1.4258208904869583 0.3988322717622081 1.0 ['ENST00000377291.2_1_5:175110069-175110369:+|nuORF'] 26576 6655 FKATNDYEHC[Carbamidomethyl]L True H1975_Epitope_Rep3 1396.6081505695897 1396.60704993586 30.55 2 -1.4258365121697594 0.3988393625930338 1.0 ['ENSG00000164363|ENST00000324642|SLC6A18'] 109924 23875 THRIPVVR True NCI_RA007_Epitope_Rep4 976.59303270972 976.5924849679301 103.56 1 -1.4259711038987997 0.3988700431695407 1.0 ['ENST00000544562.5_1_14:23067206-23078652:+|nuORF'] 55820 6045 LDEPTPLP True NCI_RA007_Epitope_Rep2 880.4541987647199 880.45310993586 28.119 2 -1.4260239630834137 0.39887242876014345 1.0 ['ENST00000330212.7_1_3:113677346-113679605:+|nuORF'] 48269 22921 KDKKKKEKRK True NCI_RA007_Epitope_Rep2 1314.8459529170998 1314.84430490379 95.578 3 -1.4260253357282728 0.39887242876014345 1.0 ['ENSG00000168916|ENST00000513986|ZNF608', 'nc|ENSG00000168916|Q9ULD9-2|ZNF608'] 77079 8345 NWQEWRQRDEQ True NCI_RA007_Epitope_Rep1 1573.7022017873699 1573.7011099358601 36.46 2 -1.4263434980619731 0.39897387509583065 1.0 ['nc|ENSG00000165113|Q5VSY0-2|GKAP1', 'ENSG00000165113|ENST00000376371|GKAP1'] 48229 5674 KDAQPSFSAED True H1975_Epitope_Rep3 1193.52004647841 1193.51894993586 26.854 2 -1.4263939881691952 0.39898334670000474 1.0 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant', 'ENST00000476448.1_1_6:52141011-52144220:-|nuORF'] 81717 11423 PSAETDVSLVY True PC9_epitope_Rep5 1179.5659340416698 1179.56428490379 48.937 3 -1.4264371434473628 0.39898334670000474 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'MEGF8|p.A1065Pfs*28|1|0.5|ENSG00000105429|chr19:42352298-42352298|T/-|frameshift_variant'] 80459 17906 PLKVSDYS True PC9_epitope_Rep2 907.46509780159 907.46400993586 74.179 2 -1.426452649002657 0.39898334670000474 1.0 ['ENST00000534568.1_1_11:64813497-64813763:-|nuORF', 'ENST00000532450.5_1_11:64812392-64813763:-|nuORF', 'ENST00000531174.1_1_11:64813610-64815186:-|nuORF', 'nc|ENSG00000168060|Q9UQQ1-8|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-2|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-3|NAALADL1', 'ENSG00000168060|ENST00000358658|NAALADL1', 'nc|ENSG00000168060|Q9UQQ1-4|NAALADL1'] 124576 14824 VLGRHPVYLR True H1975_Epitope_Rep1 1208.71421047156 1208.71310993586 62.25 2 -1.4264730645848387 0.3990022878977286 1.0 ['chr22:18170920-18173793|341|15.14|0.18|6.42|+|2|USP18,USP18|3'] 49498 23948 KKAILKMFW True PC9_epitope_Rep1 1163.68890724051 1163.68780993586 96.92 2 -1.4265075531509999 0.3990022878977286 1.0 ['ENST00000336735.8_1_14:81942796-81942856:-|nuORF'] 69092 14539 LVKEGNEAPV True PC9_epitope_Rep2 1054.56587447202 1054.56476993586 61.195 2 -1.4266863473656626 0.3990022878977286 1.0 ['nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 78956 8827 PFGWRICLAHE True H1975_Epitope_Rep1 1327.6495616096702 1327.64846993586 38.876 2 -1.4267036240430766 0.3990022878977286 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2'] 20585 9325 EQEKEPVS True H1975_Epitope_Rep2 944.4450906329998 944.44454496793 40.83 1 -1.4267118159478995 0.3990022878977286 1.0 ['nc|ENSG00000290618|P0DPF6|CDRT15P3'] 86545 25586 QRAPKPLPRV True PC9_epitope_Rep4 1160.71421047156 1160.71310993586 107.57 2 -1.4267365146919648 0.3990022878977286 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 139045 20581 YSKGICKEIY True PC9_epitope_Rep3 1202.6005457285798 1202.59944993586 84.431 2 -1.4268137796611302 0.3990117574914207 1.0 ['ENST00000381298.6_1_5:55250720-55250762:-|nuORF'] 41895 6174 IDYDRDRFDRE True PC9_epitope_Rep1 1498.6800693604598 1498.67896993586 28.563 2 -1.4269195351575754 0.3990117574914207 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 120803 15881 VGDEIREI True PC9_epitope_Rep2 929.4818104948899 929.48070993586 66.341 2 -1.426923913699289 0.3990117574914207 1.0 ['nc|ENSG00000147044|O14936-3|CASK', 'nc|ENSG00000147044|O14936-4|CASK', 'nc|ENSG00000147044|O14936-6|CASK', 'nc|ENSG00000147044|O14936-2|CASK', 'ENSG00000147044|ENST00000378163|CASK', 'nc|ENSG00000147044|O14936-5|CASK', 'ENST00000472704.1_1_X:41411986-41437658:-|nuORF'] 116124 8810 TVSSFSNG True PC9_epitope_Rep1 797.35554735261 797.35444993586 38.731 2 -1.4269518663347347 0.3990377245014682 1.0 ['FRS3|p.P327Hfs*64|1|0.27|ENSG00000137218|chr6:41771118-41771118|G/-|frameshift_variant', 'ENSG00000137218|ENST00000373018|FRS3', 'FRS3|p.R204Qfs*11|1|0.1|ENSG00000137218|chr6:41771489-41771490|-/T|frameshift_variant'] 55257 14710 LAQLGNCAW True NCI_RA007_Epitope_Rep1 974.46438660894 974.4638349679301 61.274 1 -1.4269911210886146 0.3990377245014682 1.0 ['ENST00000578759.1_1_17:60214444-60217453:-|nuORF'] 114563 7340 TSKFYMWFYFF True H1975_Epitope_Rep1 1565.70534515029 1565.70370490379 33.242 3 -1.4270585054273965 0.3990401056591314 1.0 ['ENST00000498257.5_1_6:129811877-129812174:+|nuORF'] 61791 10678 LLKLKHFPSVI True NCI_RA007_Epitope_Rep4 1293.81727855777 1293.81562490379 47.921 3 -1.427058999676646 0.3990401056591314 1.0 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 109242 20845 TFWFFFQRHKL True NCI_RA007_Epitope_Rep1 1555.8088391323897 1555.80774993586 85.315 2 -1.4272491124693967 0.3990424867044798 1.0 ['ENSG00000174567|ENST00000308302|GOLT1A'] 18180 9567 EIQEVRSK True H1975_Epitope_Rep1 987.53490869691 987.53380993586 41.722 2 -1.4272959556435858 0.3990424867044798 1.0 ['nc|ENSG00000131828|P08559-3|PDHA1', 'PDHA2|p.R312S|1|0.25|ENSG00000163114|chr4:95841086-95841086|G/T|missense_variant', 'ENSG00000131828|ENST00000422285|PDHA1', 'nc|ENSG00000131828|P08559-2|PDHA1', 'nc|ENSG00000131828|P08559-4|PDHA1', 'PDHA2|p.D313Y|1|0.43|ENSG00000163114|chr4:95841087-95841087|G/T|missense_variant', 'ENSG00000163114|ENST00000295266|PDHA2'] 69233 5588 LVNGILPQ True NCI_RA007_Epitope_Rep1 852.5069030439199 852.50580993586 25.801 2 -1.427348365248525 0.3990731569265601 1.0 ['nc|ENSG00000175455|Q49A88-2|CCDC14', 'nc|ENSG00000175455|Q49A88-3|CCDC14', 'ENSG00000175455|ENST00000409697|CCDC14', 'nc|ENSG00000175455|Q49A88-6|CCDC14', 'nc|ENSG00000175455|Q49A88|CCDC14', 'nc|ENSG00000175455|Q49A88-4|CCDC14', 'ENST00000495381.5_1_3:123633936-123674711:-|nuORF'] 65612 14262 LSGLPDTVFEI True PC9_epitope_Rep3 1189.6230549949698 1189.6219499358601 59.943 2 -1.4274019058067815 0.3990802429102058 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 130520 5246 VTWHVPIDCIL True NCI_RA007_Epitope_Rep1 1294.6743793751798 1294.6727249037901 24.489 3 -1.42744309216517 0.3990826228966948 1.0 ['ENST00000518622.5_1_19:48714695-48714965:-|nuORF'] 78323 24283 PASRGSYHLD True PC9_epitope_Rep1 1101.52032126193 1101.5197749679298 98.229 1 -1.4274644435105577 0.3990826228966948 1.0 ['ENSG00000013810|ENST00000313288|TACC3', 'ENST00000484651.5_1_4:1725148-1739714:+|nuORF'] 122179 11262 VGRKTALH True NCI_RA007_Epitope_Rep1 880.52428444356 880.52318993586 47.792 2 -1.4275186185786921 0.39908970851806436 1.0 ['nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF', 'nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6'] 83300 19535 QAIKLYLRRQR True NCI_RA007_Epitope_Rep3 1443.87865002771 1443.87700490379 85.221 3 -1.4276089806249852 0.3990967939723378 1.0 ['ENSG00000186377|ENST00000371901|CYP4X1'] 80101 22935 PKGRRTAA True PC9_epitope_Rep2 855.50388335215 855.50278993586 93.719 2 -1.4277474067642264 0.399134546226315 1.0 ['nc|ENSG00000136002|Q9NR80-4|ARHGEF4'] 105428 6077 SVALAQEK True NCI_RA007_Epitope_Rep2 844.46543215476 844.46432993586 28.244 2 -1.4277505802706334 0.399134546226315 1.0 ['ENSG00000143079|ENST00000271277|CTTNBP2NL', 'CTTNBP2NL|p.E388K|1|0.23|ENSG00000143079|chr1:112456654-112456654|G/A|missense_variant'] 81198 23556 PPLMIPIF True PC9_epitope_Rep4 926.52994698762 926.52884993586 98.915 2 -1.4277952810795758 0.3991534216856105 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6'] 81199 22343 PPLMIPIF True PC9_epitope_Rep6 926.52994698762 926.52884993586 98.913 2 -1.4278199600870716 0.3991605060544964 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6'] 30649 20964 GALEVPQLL True PC9_epitope_Rep4 938.54368247546 938.54258993586 88.799 2 -1.4280275361487518 0.39920771534344124 1.0 ['CLEC11A|p.V11E|2|0.44|ENSG00000105472|chr19:50723557-50723557|T/A|missense_variant'] 64979 13634 LSDDREEL True PC9_epitope_Rep3 975.4509042894299 975.44980993586 57.509 2 -1.428031758266968 0.39920771534344124 1.0 ['ENST00000392900.3_1_7:143551228-143582358:-|nuORF', 'nc|ENSG00000198420|Q9Y4C2-2|TCAF1', 'ENSG00000198420|ENST00000479870|TCAF1'] 119582 24160 VERLRARRRE True PC9_epitope_Rep3 1339.7908976524698 1339.7898099358601 98.219 2 -1.4281142042221664 0.39920771534344124 1.0 ['ENSG00000154252|ENST00000192314|GAL3ST2'] 123041 4924 VGYPGMKPQQH True NCI_RA007_Epitope_Rep1 1240.60227706408 1240.60116993586 23.234 2 -1.4281143142407635 0.39920771534344124 1.0 ['ENSG00000144857|ENST00000682979|BOC', 'nc|ENSG00000144857|Q9BWV1|BOC'] 75596 22447 NQRIQTVI True PC9_epitope_Rep6 970.5559784946599 970.55488993586 99.338 2 -1.4281152280939962 0.39920771534344124 1.0 ['ENST00000492143.5_1_7:148514953-148515082:-|nuORF', 'ENST00000460911.5_1_7:148514453-148515082:-|nuORF'] 36338 9874 GVHAGLRAP True H1975_Epitope_Rep2 876.49298431528 876.49188993586 42.968 2 -1.4281466405494354 0.3992147985710749 1.0 ['ENST00000366971.8_1_1:213032234-213037122:+|nuORF'] 41519 9118 IDAQDRVLLLH True H1975_Epitope_Rep3 1291.72483472491 1291.72372993586 40.061 2 -1.4282490119707008 0.3992266339715175 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 118351 8226 VDFVLLGSS True NCI_RA007_Epitope_Rep2 935.4963979298699 935.49530993586 36.634 2 -1.428265910185695 0.3992266339715175 1.0 ['ENST00000296674.12_1_5:81573566-81574204:-|nuORF'] 62087 25344 LLNGKKRRRWI True PC9_epitope_Rep5 1438.8997198254597 1438.89862993586 102.69 2 -1.428293407157736 0.3992266339715175 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 99810 7761 SLGSPVHHSP True H1975_Epitope_Rep2 1016.5039429218002 1016.50284993586 34.804 2 -1.428323792101629 0.3992266339715175 1.0 ['nc|ENSG00000099260|Q9NP74-3|PALMD', 'nc|ENSG00000099260|Q9NP74-2|PALMD', 'ENSG00000099260|ENST00000263174|PALMD'] 112681 9685 TPGAGPVP True NCI_RA007_Epitope_Rep2 694.3649898375 694.36444496793 42.291 1 -1.4284025011205672 0.3992266339715175 1.0 ['ENST00000369800.5_1_5:172116953-172117430:+|nuORF'] 76336 12714 NSELLRHERIH True NCI_RA007_Epitope_Rep1 1402.7429444005402 1402.74184993586 53.438 2 -1.4286123435259648 0.3992337164750958 1.0 ['ENSG00000180787|ENST00000318833|ZFP3'] 81460 23314 PQLARTKGG True PC9_epitope_Rep5 926.52976374682 926.5292149679301 94.656 1 -1.428720326100283 0.399252587650013 1.0 ['nc|ENSG00000172830|Q8TE77-3|SSH3', 'ENSG00000172830|ENST00000308127|SSH3', 'nc|ENSG00000172830|Q8TE77-4|SSH3'] 137919 21601 YPQTTDSK True NCI_RA007_Epitope_Rep5 938.4345259493 938.43342993586 90.176 2 -1.4288453824949976 0.39927629330158765 1.0 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1', 'AP1M1|p.F120L|1|0.51|ENSG00000072958|chr19:16208109-16208109|T/C|missense_variant'] 92306 10871 RQLLSSYQFYW True NCI_RA007_Epitope_Rep1 1489.73539940861 1489.73374490379 46.276 3 -1.4288925014836114 0.39927629330158765 1.0 ['ENSG00000254656|ENST00000649591|RTL1'] 65844 9152 LSKPTPRP True H1975_Epitope_Rep3 894.5287011176599 894.52760993586 40.193 2 -1.4288965821738981 0.39927629330158765 1.0 ['ENST00000335997.11_1_X:129199166-129199613:-|nuORF'] 13861 4848 DRAVINTV True PC9_epitope_Rep6 886.4872302285 886.48612993586 26.158 2 -1.4289310921118061 0.39927629330158765 1.0 ['nc|ENSG00000185973|Q9NVH6-7|TMLHE', 'nc|ENSG00000185973|Q9NVH6-6|TMLHE', 'nc|ENSG00000185973|Q9NVH6-5|TMLHE', 'ENSG00000185973|ENST00000334398|TMLHE', 'nc|ENSG00000185973|Q9NVH6-8|TMLHE'] 47060 6114 IVTLSTVG True NCI_RA007_Epitope_Rep4 788.4643695256 788.46326993586 30.132 2 -1.4289865064842076 0.39927629330158765 1.0 ['KCNT2|p.F240L|1|0.32|ENSG00000162687|chr1:196429676-196429676|A/C|missense_variant'] 133831 11348 WLWLDLWYLMF True NCI_RA007_Epitope_Rep1 1584.78392982416 1584.78282993586 48.113 2 -1.4289969474364386 0.39927629330158765 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2', 'ENST00000507209.5_1_4:187118658-187122526:+|nuORF'] 103103 21991 SQLNTIVTVNH True PC9_epitope_Rep6 1224.64625005104 1224.64459490379 97.509 3 -1.4290436286427148 0.39927629330158765 1.0 ['ENSG00000121871|ENST00000475390|SLITRK3'] 65611 14172 LSGLPDTVFEI True PC9_epitope_Rep3 1189.6230549949698 1189.6219499358601 59.597 2 -1.4291096655153113 0.39927629330158765 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 11050 8208 DDNGDDDDDFF True PC9_epitope_Rep5 1288.4003848381997 1288.39928993586 36.512 2 -1.4291147670271254 0.39927629330158765 1.0 ['WASHC2C|p.D455N|1|0.19|ENSG00000172661|chr10:45755058-45755058|G/A|missense_variant'] 20856 8211 EQQRRERSEKK True NCI_RA007_Epitope_Rep2 1472.7807864612394 1472.77968993586 36.576 2 -1.4291361228419486 0.39927629330158765 1.0 ['ENST00000451663.5_1_21:15313179-15342301:-|nuORF'] 126796 19288 VPSQDKMEIR True PC9_epitope_Rep1 1201.61250739461 1201.6114099358601 78.995 2 -1.4291600981481738 0.39927629330158765 1.0 ['nc|ENSG00000169180|Q96QU8-2|XPO6', 'ENSG00000169180|ENST00000304658|XPO6'] 130322 11036 VTTSPSVS True NCI_RA007_Epitope_Rep3 776.39159850816 776.39050993586 50.508 2 -1.4291681339656435 0.39927629330158765 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant'] 123681 8570 VINVIRVTI True NCI_RA007_Epitope_Rep2 1025.6597152872098 1025.65860993586 37.979 2 -1.429217550433713 0.39927629330158765 1.0 ['ENST00000570162.1_1_15:41102303-41103086:+|nuORF'] 62082 24797 LLNGKKRRRWI True NCI_RA007_Epitope_Rep1 1438.8997198254597 1438.89862993586 102.66 2 -1.429236530888367 0.39927629330158765 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 73091 11160 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 47.965 1 -1.4292708798431493 0.39927629330158765 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 28637 14759 FSRYWRRWNRF True PC9_epitope_Rep1 1672.8487468817596 1672.84764993586 61.589 2 -1.429331819175792 0.3992951604158318 1.0 ['nc|ENSG00000151067|Q13936-2|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C', 'CACNA1C|p.E1319Kfs*19|2|0.15|ENSG00000151067|chr12:2651648-2651648|G/-|frameshift_variant', 'CACNA1C|p.F940Lfs*11|1|0.31|ENSG00000151067|chr12:2597252-2597252|T/-|frameshift_variant'] 15398 5549 EALRVQGEL True PC9_epitope_Rep3 1013.55055876105 1013.54946993586 26.423 2 -1.4293663852116567 0.3992975342982415 1.0 ['ENSG00000108797|ENST00000264638|CNTNAP1'] 105787 15986 SVIGSFNP True PC9_epitope_Rep6 819.41266830591 819.41211496793 73.8 1 -1.429369272491433 0.3992975342982415 1.0 ['ENST00000332499.3_1_17:43226005-43226326:+|nuORF'] 136032 9507 YFQWWPKYSWS True NCI_RA007_Epitope_Rep2 1576.71393568804 1576.71282993586 41.594 2 -1.4293853182773368 0.3992999080687363 1.0 ['CFAP92|p.V133Lfs*18|1|0.22|ENSG00000114656|chr3:128988785-128988785|T/-|frameshift_variant'] 47832 5024 IYSSMVSQLY True H1975_Epitope_Rep3 1189.56891124713 1189.5678099358602 24.446 2 -1.4294132578986862 0.3992999080687363 1.0 ['nc|ENSG00000041515|Q9Y6X6-4|MYO16', 'MYO16|p.T705Qfs*8|1|0.13|ENSG00000041515|chr13:108962446-108962446|A/-|frameshift_variant', 'MYO16|p.L752Ffs*14|1|0.13|ENSG00000041515|chr13:108964849-108964850|-/T|frameshift_variant', 'ENST00000375857.6_1_13:109445985-109707944:+|nuORF', 'nc|ENSG00000041515|Q9Y6X6-3|MYO16', 'nc|ENSG00000041515|Q9Y6X6-2|MYO16', 'MYO16|p.V1625Wfs*16|1|0.49|ENSG00000041515|chr13:109141146-109141146|C/-|frameshift_variant', 'MYO16|p.A1658Rfs*45|1|0.14|ENSG00000041515|chr13:109141243-109141244|-/C|frameshift_variant', 'nc|ENSG00000041515|Q9Y6X6|MYO16', 'ENSG00000041515|ENST00000457511|MYO16'] 97390 7155 SGDLDLIGVAR True NCI_RA007_Epitope_Rep2 1114.59823722946 1114.5971499358602 32.453 2 -1.4294782343093755 0.3992999905722636 1.0 ['ENSG00000184445|ENST00000333479|KNTC1'] 14787 14263 DWSLEQMVR True PC9_epitope_Rep6 1162.54409348162 1162.54243490379 66.755 3 -1.4296139041596194 0.3992999905722636 1.0 ['ENSG00000162598|ENST00000371201|C1orf87'] 21878 10733 ESENSCNK True NCI_RA007_Epitope_Rep1 909.34981034917 909.34926496793 45.74 1 -1.4296268181239975 0.3992999905722636 1.0 ['nc|ENSG00000117523|Q9Y520-6|PRRC2C', 'nc|ENSG00000117523|Q9Y520-4|PRRC2C', 'nc|ENSG00000117523|Q9Y520|PRRC2C', 'ENSG00000117523|ENST00000647382|PRRC2C', 'nc|ENSG00000117523|Q9Y520-2|PRRC2C', 'nc|ENSG00000117523|Q9Y520-3|PRRC2C', 'nc|ENSG00000117523|Q9Y520-5|PRRC2C'] 15493 5622 EAQISWFAP True H1975_Epitope_Rep2 1047.5025459394699 1047.5014499358601 26.624 2 -1.4296847452354025 0.3992999905722636 1.0 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36', 'ENST00000491011.1_1_3:154032747-154042037:-|nuORF'] 36900 10861 GVQREEVP True PC9_epitope_Rep3 912.4664947839199 912.46538993586 46.753 2 -1.4297370749978264 0.3992999905722636 1.0 ['CON__Q2UVX4'] 58854 10519 LFRWEQDEIPR True H1975_Epitope_Rep1 1487.75211210191 1487.75100993586 45.414 2 -1.4297749085072928 0.3992999905722636 1.0 ['ENST00000460981.1_1_6:111714035-111726820:-|nuORF'] 22578 13553 ETNKQPGLKP True H1975_Epitope_Rep3 1110.6033226098998 1110.6022299358601 57.414 2 -1.4298158912939922 0.3992999905722636 1.0 ['ENSG00000188352|ENST00000338382|FOCAD', 'ENST00000603552.1_1_9:20881907-20885147:+|nuORF'] 55573 24659 LCKRRHKPR True NCI_RA007_Epitope_Rep1 1192.7087482516397 1192.7076499358602 102.11 2 -1.429840106455652 0.3992999905722636 1.0 ['nc|ENSG00000196586|Q9UM54-5|MYO6', 'nc|ENSG00000196586|Q9UM54-2|MYO6', 'nc|ENSG00000196586|Q9UM54-6|MYO6', 'nc|ENSG00000196586|Q9UM54-4|MYO6', 'ENSG00000196586|ENST00000369977|MYO6', 'nc|ENSG00000196586|Q9UM54|MYO6'] 69796 18058 LWRRRGALRFR True NCI_RA007_Epitope_Rep2 1485.8905521240897 1485.88944993586 74.995 2 -1.4298509403699706 0.3992999905722636 1.0 ['chr15:53523322-53684228|265|18.12|0.04|8.74|-|0|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|111', 'chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|75', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|288|2|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|347|3|anti-sense', 'chr8:91197524-91200613|289|13.1|0.22|5.87|+|2|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|98', 'chr8:127290060-127311920|196|16.7|0.02|9.43|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|62', 'chr8:127290060-127311835|257|24.31|0.0|12.5|-|1|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311835,127315431|CASC8,None|62', 'chr6:83315413-83334213|140|10.1|0.0|19.95|-|0|TE_info:L1HS,L1HS_dup688,L1,LINE,donor,+,83334213,83339981|ME1,None|110', 'chr6:109250991-109254448|382|11.17|0.13|6.42|+|2|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|77', 'chr5:90822097-90965415|264|32.48|0.18|7.5|+|0|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|114', 'chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|121', 'chr14:58012150-58032884|335|10.01|0.03|8.51|-|2|TE_info:L1PA2,L1PA2_dup4307,L1,LINE,donor,+,58032884,58038561|ARMH4,None|93'] 6969 11630 AQNVDWPVVY True H1975_Epitope_Rep3 1189.5767735088898 1189.57566993586 49.869 2 -1.4298549696085079 0.3992999905722636 1.0 ['KCNH5|p.I35N|1|0.32|ENSG00000140015|chr14:63016924-63016924|A/T|missense_variant'] 29559 25125 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 105.26 3 -1.429898617973258 0.3993259327346862 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 37614 11337 GYSPFLSITDG True PC9_epitope_Rep2 1155.54480467427 1155.54370993586 48.928 2 -1.4299619584714613 0.3993259327346862 1.0 ['ENSG00000089693|ENST00000203630|MLF2', 'ENST00000536249.1_1_12:6861069-6861237:-|nuORF', 'MLF2|p.Y121*|1|0.3|ENSG00000089693|chr12:6750210-6750213|TTGG/-|frameshift_variant', 'ENST00000541346.1_1_12:6859683-6861527:-|nuORF'] 125548 22462 VLWTRLRELPD True PC9_epitope_Rep3 1396.7826839542 1396.7815899358602 91.677 2 -1.4299909104265738 0.39933301123039394 1.0 ['SPOCD1|p.R938Gfs*122|1|0.29|ENSG00000134668|chr1:31792365-31792365|G/-|frameshift_variant', 'nc|ENSG00000134668|Q6ZMY3-2|SPOCD1', 'ENSG00000134668|ENST00000360482|SPOCD1', 'nc|ENSG00000134668|Q6ZMY3-3|SPOCD1'] 66944 10941 LSYMPIWKF True NCI_RA007_Epitope_Rep5 1183.6099882134697 1183.6088899358601 48.723 2 -1.430017015294179 0.3993353837451833 1.0 ['ERBB2-PPP1R1B|2|fusion', 'ERBB2-PPP1R1B|1|fusion', 'nc|ENSG00000141736|P04626-5|ERBB2', 'nc|ENSG00000141736|P04626-4|ERBB2', 'ENSG00000141736|ENST00000269571|ERBB2', 'nc|ENSG00000141736|P04626-6|ERBB2', 'ENST00000583038.5_1_17:37872360-37881463:+|nuORF', 'ENST00000582788.5_1_17:37872360-37873734:+|nuORF', 'ENST00000584684.1_1_17:37873623-37876175:+|nuORF'] 16946 7463 EGETTSHLIGM True H1975_Epitope_Rep1 1173.53358836757 1173.5324899358602 33.703 2 -1.4300723874281314 0.3993353837451833 1.0 ['ENST00000401028.2_1_1:91793937-91794252:+|nuORF'] 3323 9881 AGGSGSGS True H1975_Epitope_Rep3 578.2296185635 578.22907496793 43.038 1 -1.4301113561980947 0.39935424571657513 1.0 ['ENSG00000130307|ENST00000252597|USHBP1', 'ENST00000513237.5_1_4:106067634-106067973:+|nuORF'] 82246 9124 PTKTSGVP True H1975_Epitope_Rep3 785.4283183700499 785.4277649679301 40.084 1 -1.4301583708969412 0.3993684012066365 1.0 ['nc|ENSG00000126883|P35658-2|NUP214', 'nc|ENSG00000126883|P35658-4|NUP214', 'ENSG00000126883|ENST00000359428|NUP214', 'nc|ENSG00000126883|P35658-3|NUP214', 'nc|ENSG00000126883|P35658-5|NUP214'] 136798 10751 YISRMMHKSYI True PC9_epitope_Rep6 1427.7053622336302 1427.70426993586 52.178 2 -1.4301858416829578 0.3993684012066365 1.0 ['ENSG00000166396|ENST00000398019|SERPINB7', 'nc|ENSG00000166396|O75635-2|SERPINB7'] 79585 8021 PGVDKPDP True H1975_Epitope_Rep3 823.4075829254699 823.40703496793 35.827 1 -1.4302845121917303 0.3993849271810341 1.0 ['nc|ENSG00000168310|P14316-2|IRF2', 'ENSG00000168310|ENST00000393593|IRF2', 'ENST00000512020.5_1_4:185339662-185350218:-|nuORF', 'IRF2|p.N167Kfs*2|1|0.48|ENSG00000168310|chr4:184408186-184408187|-/T|frameshift_variant'] 58725 16772 LFLESTNKI True PC9_epitope_Rep3 1063.59136094387 1063.59026993586 69.66 2 -1.4303211658831114 0.3993849271810341 1.0 ['ENSG00000116954|ENST00000373001|RRAGC', 'ENSG00000025039|ENST00000369415|RRAGD'] 59972 13617 LHNGLLAR True PC9_epitope_Rep3 892.52428444356 892.52318993586 57.441 2 -1.4303602422782205 0.3993849271810341 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 62649 15770 LLVSMWGPW True PC9_epitope_Rep1 1087.55247333735 1087.55136993586 65.482 2 -1.4303946383406576 0.3993849271810341 1.0 ['ENST00000496432.6_1_1:10713095-10754402:-|nuORF'] 117259 16162 TYYYELWWFWL True NCI_RA007_Epitope_Rep2 1668.7653025545596 1668.7642099358602 67.592 2 -1.4304501434868464 0.39939908094733123 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 31409 3785 GEDEYEKA True PC9_epitope_Rep3 939.3821560232699 939.38104993586 19.661 2 -1.430457369015302 0.39939908094733123 1.0 ['ENSG00000133056|ENST00000684373|PIK3C2B'] 29560 25198 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 105.62 3 -1.4305175153164806 0.39940852803600674 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 10850 5754 DAKNNSIHTVP True H1975_Epitope_Rep2 1194.59929985862 1194.59820993586 27.13 2 -1.4305276047668007 0.39940852803600674 1.0 ['MROH7|p.D362N|1|0.1|ENSG00000184313|chr1:54654010-54654010|G/A|missense_variant'] 59468 23064 LGNRGFKN True PC9_epitope_Rep3 904.4878989348399 904.4873549679301 93.983 1 -1.4305408314053685 0.39940852803600674 1.0 ['ENST00000592042.5_1_17:74621414-74633692:-|nuORF', 'ENSG00000070526|ENST00000156626|ST6GALNAC1'] 31012 9808 GAVDCFRQI True PC9_epitope_Rep2 1007.48585032951 1007.48474993586 43.064 2 -1.4305718925235122 0.3994156043075618 1.0 ['nc|ENSG00000077713|Q8WUT9-2|SLC25A43', 'ENSG00000077713|ENST00000217909|SLC25A43'] 15273 10724 EAGVRVLCQGL True NCI_RA007_Epitope_Rep5 1143.6070280913498 1143.60592993586 47.889 2 -1.4306562178688682 0.3994226804123711 1.0 ['ENST00000525522.5_1_11:494693-499199:-|nuORF', 'ENST00000525701.5_1_11:494693-500690:-|nuORF', 'ENSG00000023191|ENST00000354420|RNH1'] 26855 6650 FLEVAEAP True NCI_RA007_Epitope_Rep1 874.4436340810198 874.44252993586 29.879 2 -1.430773404885252 0.3994439077263838 1.0 ['CON__Q2KJF1'] 128434 10770 VSEKLRDL True PC9_epitope_Rep1 958.5447451046199 958.54364993586 46.315 2 -1.4307988495517687 0.3994439077263838 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 33265 18391 GLAPPFLS True PC9_epitope_Rep3 800.4432401582001 800.44214993586 75.948 2 -1.430812588497082 0.3994439077263838 1.0 ['ENST00000556418.1_3_14:93153644-93153968:+|nuORF'] 40403 23105 HRVRLAVGNR True NCI_RA007_Epitope_Rep3 1176.6952063624797 1176.69355490379 100.39 3 -1.430830997036007 0.39945098316426914 1.0 ['SLC27A1|p.G365R|1|0.21|ENSG00000130304|chr19:17497351-17497351|G/A|missense_variant'] 52405 18352 KPGPLRRAH True NCI_RA007_Epitope_Rep1 1030.6148307834599 1030.6137299358602 75.521 2 -1.4309264831713435 0.3994698397737983 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 31075 10697 GAWIPFQVP True PC9_epitope_Rep4 1013.5334521449298 1013.53234993586 48.898 2 -1.4310072151886266 0.39948869593902053 1.0 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136'] 33194 10416 GKYDSLIQDQA True H1975_Epitope_Rep1 1236.59863115228 1236.5975299358602 45.017 2 -1.431139887329253 0.39952640693660685 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP'] 36013 16175 GVDFEGTF True PC9_epitope_Rep1 870.37594844402 870.3753949679301 67.032 1 -1.4311502856363665 0.39952640693660685 1.0 ['COMP|p.D659Vfs*40|1|0.11|ENSG00000105664|chr19:18784295-18784302|CTCTGTGT/-|frameshift_variant', 'nc|ENSG00000105664|P49747-2|COMP', 'ENSG00000105664|ENST00000222271|COMP', 'ENST00000504720.5_1_5:79374662-79378961:+|nuORF', 'SERINC5-THBS4|1|fusion', 'ENSG00000113296|ENST00000350881|THBS4', 'CON__ENSEMBL:ENSBTAP00000006074', 'ENSG00000169231|ENST00000368378|THBS3', 'nc|ENSG00000169231|P49746-2|THBS3'] 118945 6185 VEESERLFQ True H1975_Epitope_Rep2 1135.5509526838698 1135.5503749679299 28.761 1 -1.4311816018109411 0.3995452617690024 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 117336 23002 VAALLLFLVL True PC9_epitope_Rep4 1070.71035387774 1070.70977496793 96.697 1 -1.43126053865433 0.3995594090898381 1.0 ['ENSG00000027697|ENST00000367739|IFNGR1'] 80397 15306 PLIAIHKARY True H1975_Epitope_Rep3 1180.70806246196 1180.7069699358601 64.285 2 -1.431288981125951 0.3995594090898381 1.0 ['nc|ENSG00000167220|Q9H0R4-2|HDHD2', 'ENST00000588183.5_1_18:44635055-44662674:-|nuORF', 'ENSG00000167220|ENST00000300605|HDHD2'] 35263 11987 GSLPAPSSL True PC9_epitope_Rep5 827.43888305375 827.43833496793 51.104 1 -1.4313476213435743 0.399561775515974 1.0 ['ENST00000396884.6_1_22:38368385-38368778:-|nuORF'] 121225 19972 VGGPNGGK True PC9_epitope_Rep6 684.35548778296 684.35493496793 89.487 1 -1.431367239166821 0.399561775515974 1.0 ['ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1'] 117157 5962 TYSRNERWEY True H1975_Epitope_Rep1 1402.62657723562 1402.62548993586 28.004 2 -1.4314763011976632 0.39959240891045955 1.0 ['ENSG00000086570|ENST00000261800|FAT2'] 71588 3679 MLHCQPAP True PC9_epitope_Rep1 895.4044292046699 895.40332993586 19.069 2 -1.4315144304727974 0.39959948168217696 1.0 ['ENST00000156825.5_1_19:1577339-1577516:-|nuORF'] 76029 23601 NRKLIYNFK True PC9_epitope_Rep3 1194.6873270173799 1194.68569490379 96.067 3 -1.4315693528417481 0.3996065542872625 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF', 'ENSG00000125900|ENST00000381623|SIRPD'] 9358 8262 AVTRYVSSGTF True H1975_Epitope_Rep1 1186.59823722946 1186.5971499358602 36.718 2 -1.431792358502863 0.39968430476369976 1.0 ['ENST00000568546.5_3_16:2025038-2025397:+|nuORF'] 54576 8579 LACLFENQFR True PC9_epitope_Rep3 1239.6070280913498 1239.6053849037899 37.95 3 -1.4319718280839124 0.39971493527145935 1.0 ['ENSG00000121053|ENST00000225371|EPX'] 14744 16709 DVVKVLSKTTE True NCI_RA007_Epitope_Rep1 1217.68671788069 1217.68562993586 69.118 2 -1.4321076367311665 0.3997337856621198 1.0 ['ENSG00000214193|ENST00000453908|SH3D21', 'nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21'] 36364 12514 GVHPAPGF True PC9_epitope_Rep3 780.39187329168 780.39076993586 53.159 2 -1.43219358405233 0.3997408563519642 1.0 ['ENSG00000180667|ENST00000315927|YOD1'] 92202 5323 RQGVEEML True H1975_Epitope_Rep3 960.4698659121999 960.46876993586 25.548 2 -1.4323053925491458 0.39974324849541265 1.0 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF'] 5999 20711 APLKLHTH True PC9_epitope_Rep4 915.52903547083 915.52792993586 87.828 2 -1.4323292477979426 0.39974324849541265 1.0 ['ENST00000510726.1_3_3:141145004-141146592:+|nuORF'] 10461 19033 CMRWLKTPV True PC9_epitope_Rep5 1132.58854157624 1132.5874499358601 78.238 2 -1.4324373547478526 0.39974324849541265 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|445|3|anti-sense'] 29898 7796 FWDIYKSNFWL True H1975_Epitope_Rep3 1517.7343367794497 1517.7332299358602 34.97 2 -1.432466895981243 0.39974324849541265 1.0 ['WDR49|p.K409Sfs*23|1|0.16|ENSG00000174776|chr3:167529178-167529178|C/-|frameshift_variant'] 126460 22682 VPLSHRPPA True PC9_epitope_Rep1 972.5504991913999 972.54940993586 92.05 2 -1.4324966520592386 0.39974324849541265 1.0 ['ENSG00000105556|ENST00000264819|MIER2'] 81451 6651 PQKPQAQKRG True NCI_RA007_Epitope_Rep1 1136.6414394541196 1136.64034993586 29.883 2 -1.4325206364338101 0.39974324849541265 1.0 ['ENSG00000148843|ENST00000369797|PDCD11'] 134233 18015 WRRQRDLRRAL True NCI_RA007_Epitope_Rep1 1524.88619501964 1524.8850899358602 74.213 2 -1.4325996036498094 0.39974324849541265 1.0 ['ENSG00000128408|ENST00000614167|RIBC2'] 92389 24372 RQRFLCLRRW True PC9_epitope_Rep2 1432.7986258851997 1432.7975299358602 99.315 2 -1.43262933926974 0.39974324849541265 1.0 ['ENST00000466292.1_1_3:119033568-119041517:-|nuORF'] 19288 15900 ELLRRKDTHIR True H1975_Epitope_Rep1 1435.83717913855 1435.8360899358602 66.469 2 -1.4326702669913312 0.39974324849541265 1.0 ['ENSG00000107560|ENST00000355624|RAB11FIP2', 'nc|ENSG00000107560|Q7L804-2|RAB11FIP2', 'ENST00000476207.1_1_10:119765292-119774614:-|nuORF'] 65895 16585 LSLEEEARF True PC9_epitope_Rep2 1092.54513902744 1092.5440499358601 69.031 2 -1.4327934703861358 0.39974324849541265 1.0 ['nc|ENSG00000103199|O60304-2|ZNF500', 'ENSG00000103199|ENST00000219478|ZNF500'] 10840 12362 DAIRAHRAGRK True NCI_RA007_Epitope_Rep2 1249.7115847026096 1249.71048993586 52.691 2 -1.4328101908022342 0.39974324849541265 1.0 ['ENST00000491136.6_1_1:52823963-52826194:-|nuORF', 'ENST00000460261.5_1_1:52822810-52825784:-|nuORF', 'nc|ENSG00000154222|Q5T0F9-3|CC2D1B', 'ENSG00000154222|ENST00000284376|CC2D1B', 'nc|ENSG00000154222|Q5T0F9|CC2D1B'] 85589 14385 QLLRRRAEQ True PC9_epitope_Rep1 1168.678887592 1168.6777899358601 60.155 2 -1.4328168682506528 0.39974324849541265 1.0 ['ENST00000375078.3_1_1:20810205-20811795:-|nuORF'] 120358 15721 VFRDMAKP True PC9_epitope_Rep6 962.5007721176598 962.49966993586 72.693 2 -1.432851875280492 0.3997856503509681 1.0 ['RIMS1|p.V58F|1|0.19|ENSG00000079841|chr6:71968990-71968990|G/T|missense_variant'] 61886 11302 LLLHFYWKYYY True H1975_Epitope_Rep2 1607.8176724805899 1607.8165699358601 48.52 2 -1.4329004913090537 0.3998233423625015 1.0 ['ENST00000529782.5_1_11:46140300-46141325:-|nuORF'] 67077 7371 LTCLTEQN True PC9_epitope_Rep1 920.42733239388 920.42622993586 33.166 2 -1.4329119544464275 0.3998233423625015 1.0 ['ENSG00000035720|ENST00000265404|STAP1', 'STAP1|p.I238Gfs*14|1|0.19|ENSG00000035720|chr4:67590933-67590940|ACTATTGA/-|frameshift_variant'] 54665 12426 LADYLTSA True PC9_epitope_Rep4 852.42289863644 852.42180993586 55.601 2 -1.4329533697502252 0.399832770011659 1.0 ['ENSG00000138449|ENST00000261024|SLC40A1', 'ENST00000479598.5_1_2:190437559-190445261:-|nuORF', 'ENST00000418714.1_1_2:190443126-190445261:-|nuORF'] 49131 22688 KGGHRGGGGG True PC9_epitope_Rep3 838.4157966237398 838.41468993586 92.543 2 -1.4329936533392686 0.399832770011659 1.0 ['ENSG00000136026|ENST00000378026|CKAP4'] 3101 6931 AGAPPADP True H1975_Epitope_Rep1 694.32860432878 694.32805496793 31.703 1 -1.4330017401720885 0.399832770011659 1.0 ['ENSG00000186907|ENST00000335099|RTN4RL2'] 4971 8571 ALINMRIWRKD True NCI_RA007_Epitope_Rep4 1414.7867237888197 1414.78507490379 39.752 3 -1.433169862090092 0.39983513895430994 1.0 ['ENST00000297540.4_1_5:125960605-125960665:+|nuORF'] 22327 9423 ETEFKELDGLR True H1975_Epitope_Rep1 1335.6670450652698 1335.66594993586 41.158 2 -1.4331703049450721 0.39983513895430994 1.0 ['ENSG00000179071|ENST00000316398|CCDC89'] 56454 8243 LDSSFRNEI True NCI_RA007_Epitope_Rep3 1079.52473793603 1079.52364993586 39.557 2 -1.4332020252881004 0.39983513895430994 1.0 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5'] 77870 16817 PAGPGLAPKRP True PC9_epitope_Rep3 1059.61891310439 1059.6178099358601 69.838 2 -1.4332485953688898 0.39983513895430994 1.0 ['ENSG00000148411|ENST00000277554|NACC2'] 33087 15834 GKGTDVLRTL True PC9_epitope_Rep5 1058.60840799034 1058.60730993586 65.898 2 -1.4332525621434489 0.39983513895430994 1.0 ['ENST00000371989.7_1_9:136230106-136230334:-|nuORF'] 91952 9511 RPPPHPPP True PC9_epitope_Rep1 893.4871706588499 893.48606993586 41.439 2 -1.4333389448784488 0.39983513895430994 1.0 ['ENST00000261716.7_1_17:27717806-27778530:+|nuORF', 'ENST00000470271.5_1_1:41445802-41446012:+|nuORF'] 49575 21589 KKKKEEKSKDK True PC9_epitope_Rep6 1374.81946338574 1374.8178149037901 95.919 3 -1.4333799294708895 0.39983513895430994 1.0 ['ENSG00000198515|ENST00000514170|CNGA1'] 55876 19704 LDFVTLEL True H1975_Epitope_Rep2 948.5167990212799 948.51570993586 81.761 2 -1.4335819555344236 0.399877533236773 1.0 ['ENST00000318709.8_1_7:32627221-32627503:+|nuORF'] 15586 17300 EATLVALL True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 73.32 2 -1.4337792656640733 0.3999034419415235 1.0 ['nc|ENSG00000132437|P20711-3|DDC', 'ENSG00000132437|ENST00000444124|DDC', 'nc|ENSG00000132437|P20711-2|DDC'] 99144 15415 SLALQAEK True PC9_epitope_Rep5 858.4810822188999 858.48053496793 64.303 1 -1.4337929518805386 0.3999034419415235 1.0 ['ENSG00000163154|ENST00000368910|TNFAIP8L2'] 81759 14954 PSDNPHVL True PC9_epitope_Rep4 877.42938099921 877.42828993586 65.46 2 -1.433818492922878 0.39991050821911356 1.0 ['ENSG00000145623|ENST00000274276|OSMR'] 97190 12914 SFILWWCF True PC9_epitope_Rep4 1100.5153595526401 1100.51426993586 57.559 2 -1.4338753823318517 0.3999128653180416 1.0 ['ENST00000361360.3_2_2:105473593-105473881:+|nuORF'] 112169 5649 TLVPAHPAL True NCI_RA007_Epitope_Rep4 917.53345214493 917.53234993586 28.333 2 -1.4339103211111077 0.3999128653180416 1.0 ['ENSG00000138629|ENST00000395081|UBL7'] 112443 21572 TNLRQLTKTSR True PC9_epitope_Rep6 1316.75244645508 1316.7513499358602 95.853 2 -1.4339394014561848 0.399926996985682 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 24512 7530 FAIYGGVSG True PC9_epitope_Rep6 869.4283183700499 869.4272299358599 38.225 2 -1.4339720334209698 0.399926996985682 1.0 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 13429 7659 DNQHLKKTI True H1975_Epitope_Rep2 1095.60365696307 1095.60254993586 34.414 2 -1.433981554871183 0.3999340625699113 1.0 ['nc|ENSG00000136861|Q96SN8-3|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-2|CDK5RAP2', 'ENSG00000136861|ENST00000349780|CDK5RAP2', 'nc|ENSG00000136861|Q96SN8-4|CDK5RAP2', 'ENST00000483412.5_1_9:123170580-123298708:-|nuORF', 'CDK5RAP2|p.M736*|1|0.22|ENSG00000136861|chr9:120458619-120458619|T/-|frameshift_variant'] 70659 26666 MCPFGCHC True NCI_RA007_Epitope_Rep1 896.2801572916799 896.27960496793 110.48 1 -1.4341118945016524 0.3999529023902037 1.0 ['ENSG00000182492|ENST00000331595|BGN'] 28289 6192 FRWLYEKFRYP True NCI_RA007_Epitope_Rep2 1603.8299684997899 1603.82833490379 28.693 3 -1.4345532414758924 0.4000211931757974 1.0 ['ENSG00000167904|ENST00000434581|TMEM68'] 122634 14548 VGTNGGLK True NCI_RA007_Epitope_Rep3 744.41300265908 744.4124549679301 64.54 1 -1.434571380537976 0.4000211931757974 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 45957 2817 ISSPAPTLEE True NCI_RA007_Epitope_Rep1 1042.5182555732601 1042.51714993586 14.796 2 -1.4346027607840106 0.4000211931757974 1.0 ['nc|ENSG00000147509|O76081-4|RGS20'] 88588 19356 RALKQRQQQLH True NCI_RA007_Epitope_Rep3 1404.80621336344 1404.80455490379 84.492 3 -1.4346657753285608 0.40006122184678056 1.0 ['ENSG00000185298|ENST00000329214|CCDC137'] 137719 12599 YMVVYLVI True PC9_epitope_Rep6 998.5510763550197 998.54996993586 59.915 2 -1.4347247804059045 0.40006122184678056 1.0 ['ENST00000602063.5_1_19:52495975-52496068:-|nuORF'] 12661 10576 DLEMEMLKHL True H1975_Epitope_Rep3 1257.6097305132898 1257.60862993586 45.749 2 -1.434755504791798 0.40006122184678056 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 67074 17228 LTCHSTGIPAP True NCI_RA007_Epitope_Rep3 1095.5382798251899 1095.5371899358602 75.662 2 -1.4348211987397992 0.40006122184678056 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 104696 15691 STASNTIA True PC9_epitope_Rep3 763.37119741675 763.37010993586 65.497 2 -1.4348927615889104 0.40006828510207443 1.0 ['ENST00000494730.2_1_22:25436553-25570783:+|nuORF'] 134574 64 WVSTTREQTF True PC9_epitope_Rep2 1253.6040508858898 1253.6023949037901 0.36561 3 -1.434904480042674 0.40008005368305805 1.0 ['MFNG|p.R81T|1|0.29|ENSG00000100060|chr22:37485936-37485936|C/G|missense_variant'] 52859 19997 KRCRKCAP True PC9_epitope_Rep6 960.5109599618797 960.50986993586 89.585 2 -1.4349626995002258 0.40008005368305805 1.0 ['nc|ENSG00000099139|Q92824|PCSK5', 'ENSG00000099139|ENST00000674117|PCSK5', 'nc|ENSG00000099139|Q92824-2|PCSK5', 'PCSK5|p.C1375Wfs*51|1|0.3|ENSG00000099139|chr9:76323152-76323155|CTGT/-|frameshift_variant'] 18005 18896 EIHRRNAFRNK True H1975_Epitope_Rep1 1439.7858122720297 1439.78470993586 78.793 2 -1.435000117366234 0.40008005368305805 1.0 ['ENSG00000187815|ENST00000372706|ZFP69'] 60326 11177 LIGADGHNSG True PC9_epitope_Rep4 939.44100831207 939.43990993586 50.772 2 -1.4350044327677307 0.40008005368305805 1.0 ['nc|ENSG00000119723|Q9Y2Z9-3|COQ6', 'ENSG00000119723|ENST00000334571|COQ6', 'ENST00000557584.5_1_14:74417012-74426158:+|nuORF', 'nc|ENSG00000119723|Q9Y2Z9-2|COQ6'] 52407 18547 KPGPLRRAH True NCI_RA007_Epitope_Rep5 1030.6148307834599 1030.6137299358602 78.166 2 -1.4350146584371115 0.40008005368305805 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 70589 23546 LYYPEIKDK True H1975_Epitope_Rep1 1167.6175756917098 1167.61594490379 97.812 3 -1.4351284032736702 0.400105950909412 1.0 ['ENSG00000109320|ENST00000226574|NFKB1', 'nc|ENSG00000109320|P19838|NFKB1', 'nc|ENSG00000109320|P19838-3|NFKB1'] 124117 17408 VKVKKIFKK True NCI_RA007_Epitope_Rep4 1116.7746854697998 1116.7741749679299 75.38 1 -1.4351293609187852 0.400105950909412 1.0 ['TEX14|p.L43F|1|0.45|ENSG00000121101|chr17:58651875-58651875|G/A|missense_variant'] 72646 21383 MWKFVSPLC True PC9_epitope_Rep5 1109.54019440149 1109.5390899358601 87.312 2 -1.4351637718558357 0.40010829644975987 1.0 ['ENSG00000197106|ENST00000331565|SLC6A17'] 74510 17348 NKSSQAQA True H1975_Epitope_Rep1 832.40389452736 832.40278993586 72.194 2 -1.4353209042468027 0.40010829644975987 1.0 ['ENSG00000174669|ENST00000357440|SLC29A2', 'nc|ENSG00000174669|Q14542-3|SLC29A2', 'nc|ENSG00000174669|Q14542-4|SLC29A2'] 61166 21974 LLDKCLREN True PC9_epitope_Rep1 1102.58047899034 1102.57938993586 89.344 2 -1.4353406545929885 0.40010829644975987 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 85475 17833 QLHRRKVIS True NCI_RA007_Epitope_Rep3 1135.69380938015 1135.6921649037902 78.188 3 -1.4353485861660427 0.40010829644975987 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 108993 18900 TEVLAALL True NCI_RA007_Epitope_Rep5 828.4956696538799 828.49456993586 79.542 2 -1.435365624708569 0.40010829644975987 1.0 ['ENSG00000273540|ENST00000614907|AGBL1', 'nc|ENSG00000273540|Q96MI9|AGBL1', 'AGBL1|p.A233Qfs*32|1|0.36|ENSG00000273540|chr15:86247840-86247840|G/-|frameshift_variant'] 44002 6685 ILHSVYECIAK True H1975_Epitope_Rep1 1274.66929399474 1274.66818993586 30.764 2 -1.435394952249279 0.40010829644975987 1.0 ['ENST00000505994.1_1_4:120314876-120316112:-|nuORF'] 22936 11097 EVGTRTYSP True PC9_epitope_Rep3 1008.48762415132 1008.48652993586 47.681 2 -1.4354683391472727 0.40010829644975987 1.0 ['PDZRN3|p.P820R|1|0.67|ENSG00000121440|chr3:73384107-73384107|G/C|missense_variant'] 16462 10542 EELRQKHEYEL True H1975_Epitope_Rep3 1472.7259569237197 1472.7248499358602 45.616 2 -1.435550850185027 0.4001271291184537 1.0 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR'] 137257 16170 YLGEAHEWNQN True NCI_RA007_Epitope_Rep4 1359.58437807047 1359.5832899358602 70.126 2 -1.435638795860687 0.40017891403886674 1.0 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 119158 23000 VEISVPVP True PC9_epitope_Rep1 838.4800195897399 838.4794749679301 93.265 1 -1.4356418075366528 0.40017891403886674 1.0 ['AP1M2|p.I376Sfs*20|1|0.55|ENSG00000129354|chr19:10574952-10574952|G/-|frameshift_variant', 'ENSG00000129354|ENST00000250244|AP1M2', 'nc|ENSG00000129354|Q9Y6Q5-2|AP1M2'] 19576 5951 ELREFPWP True NCI_RA007_Epitope_Rep1 1072.53418042092 1072.53308993586 27.195 2 -1.4356418356641025 0.40017891403886674 1.0 ['ENST00000508487.2_1_4:74964623-74965000:-|nuORF'] 55997 16606 LDIQHVLDKL True NCI_RA007_Epitope_Rep2 1192.6815729306 1192.6804699358602 69.323 2 -1.4356466707287652 0.40017891403886674 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 120528 13471 VFYVYHYLE True NCI_RA007_Epitope_Rep2 1231.59136094387 1231.59077496793 57.043 1 -1.435762953290002 0.40019534927508943 1.0 ['CON__Q1A7A4'] 22496 5252 ETIQAYYWHK True H1975_Epitope_Rep1 1337.64043639461 1337.63878490379 25.264 3 -1.4357970826096869 0.40019534927508943 1.0 ['ENSG00000105352|ENST00000221954|CEACAM4', 'ENST00000472081.1_1_19:42131969-42133331:-|nuORF'] 21470 17702 ERQNRRILHSK True NCI_RA007_Epitope_Rep3 1435.81202701987 1435.81092993586 77.614 2 -1.4359056133141674 0.40019534927508943 1.0 ['ENSG00000151461|ENST00000357604|UPF2'] 137922 11032 YPQWRRIH True PC9_epitope_Rep3 1154.6097454030198 1154.60864993586 47.428 2 -1.4359620272925984 0.40019534927508943 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 52948 22044 KRKVESLWPI True PC9_epitope_Rep1 1254.7448418934998 1254.74320490379 89.606 3 -1.4360195106886986 0.40019534927508943 1.0 ['ENSG00000106245|ENST00000222969|BUD31', 'nc|ENSG00000106245|P41223-2|BUD31', 'ENST00000471813.1_1_7:99008715-99013888:+|nuORF'] 56911 10637 LEDQRPPEEH True H1975_Epitope_Rep3 1248.5734790336 1248.5723899358602 45.988 2 -1.436188108196173 0.40019534927508943 1.0 ['ENST00000412733.1_X:151869075-151869150:+|nuORF', 'ENST00000457643.1_X:151867294-151869150:+|nuORF', 'ENST00000417212.1_X:151936326-151938209:-|nuORF'] 12016 17393 DICRWPLMP True H1975_Epitope_Rep3 1129.5412570306498 1129.54067496793 72.574 1 -1.4361893554417766 0.40019534927508943 1.0 ['ENST00000372870.5_1_9:131122965-131123439:+|nuORF'] 112479 16238 TNRKRVLN True NCI_RA007_Epitope_Rep4 999.5937609857099 999.59266993586 70.419 2 -1.4362706634674485 0.40019534927508943 1.0 ['ENSG00000197724|ENST00000359246|PHF2'] 32303 15749 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 67.295 2 -1.4362812446836124 0.40019534927508943 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 134664 11670 WWMFDYWKKNK True NCI_RA007_Epitope_Rep2 1630.7754903987795 1630.7743899358602 49.987 2 -1.436299586165547 0.40019534927508943 1.0 ['PGM2L1|p.C368Y|1|0.32|ENSG00000165434|chr11:74345584-74345584|C/T|missense_variant'] 65872 7736 LSLAELDTIDH True H1975_Epitope_Rep1 1225.61903224369 1225.61792993586 34.719 2 -1.4363248449032169 0.40019534927508943 1.0 ['ENST00000282120.6_1_2:85547765-85547996:-|nuORF'] 112431 23689 TNLLSQPRGI True PC9_epitope_Rep5 1097.61930702721 1097.61820993586 96.098 2 -1.436334028380205 0.40019534927508943 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 60726 25406 LKAKKPQKRKP True H1975_Epitope_Rep3 1320.8717737421198 1320.8701349037901 105.7 3 -1.436355957877467 0.40019534927508943 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 93103 13254 RRRPESEPPSE True H1975_Epitope_Rep3 1338.6640253734997 1338.6629299358601 56.238 2 -1.4363563823243783 0.40019534927508943 1.0 ['ENSG00000140832|ENST00000268485|MARVELD3', 'nc|ENSG00000140832|Q96A59-2|MARVELD3'] 48298 17753 KDLPWPPP True PC9_epitope_Rep4 948.5069030439199 948.50580993586 76.31 2 -1.4363700124865575 0.40019534927508943 1.0 ['ENSG00000138606|ENST00000690270|SHF', 'nc|ENSG00000138606|Q7M4L6|SHF'] 124991 11971 VLNQTTRL True PC9_epitope_Rep1 943.5450794577899 943.5439899358599 50.909 2 -1.436396418708534 0.40019534927508943 1.0 ['nc|ENSG00000091879|O15123-2|ANGPT2', 'ENSG00000091879|ENST00000629816|ANGPT2', 'nc|ENSG00000091879|O15123|ANGPT2'] 140932 18583 YYYRDRDWRWV True NCI_RA007_Epitope_Rep1 1676.7848092125198 1676.78370993586 76.422 2 -1.4364568497889783 0.40019534927508943 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 47018 12609 IVRDLDLKKP True H1975_Epitope_Rep1 1195.72885747619 1195.7277699358601 53.55 2 -1.436468014405061 0.40019534927508943 1.0 ['ENSG00000168906|ENST00000306434|MAT2A', 'ENST00000485270.5_1_10:82033539-82034994:-|nuORF', 'ENSG00000151224|ENST00000372213|MAT1A'] 31192 19409 GDIFRSKLKNR True H1975_Epitope_Rep1 1332.7626172159598 1332.7615299358602 80.837 2 -1.4364740986419822 0.40019534927508943 1.0 ['nc|ENSG00000079335|Q9UNH5-3|CDC14A', 'ENSG00000079335|ENST00000336454|CDC14A', 'nc|ENSG00000079335|Q9UNH5-5|CDC14A', 'nc|ENSG00000079335|Q9UNH5-2|CDC14A'] 69157 6596 LVLSTLSG True PC9_epitope_Rep6 788.4643695256 788.46326993586 34.078 2 -1.4366254680680612 0.40022358201929864 1.0 ['ENSG00000120158|ENST00000381750|RCL1', 'ENST00000442869.5_1_9:4793091-4833155:+|nuORF'] 53259 25345 KTGKKGKG True PC9_epitope_Rep4 802.5024863698198 802.50138993586 106.34 2 -1.4366460061471802 0.40022358201929864 1.0 ['ENSG00000137077|ENST00000259607|CCL21'] 25568 5233 FESKVSASE True NCI_RA007_Epitope_Rep5 982.46074069714 982.4596499358599 26.825 2 -1.43666986070655 0.40022358201929864 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 120497 793 VFVVVVLVLLA True PC9_epitope_Rep5 1169.77876779073 1169.77711490379 4.4097 3 -1.4366817550774043 0.40022358201929864 1.0 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8'] 87284 9410 QSSYIREQYVL True NCI_RA007_Epitope_Rep2 1384.69867954672 1384.6975899358602 41.213 2 -1.4367379981679906 0.4002259301969829 1.0 ['ENSG00000145198|ENST00000691901|VWA5B2', 'ENST00000461141.5_1_3:183952309-183959823:+|nuORF'] 18000 10824 EIHQEYKEL True NCI_RA007_Epitope_Rep3 1187.5822528121498 1187.5811499358601 49.626 2 -1.4368221793798754 0.4002259301969829 1.0 ['CFAP36|p.M284Cfs*3|1|0.11|ENSG00000163001|chr2:55544291-55544291|G/-|frameshift_variant', 'ENSG00000163001|ENST00000349456|CFAP36', 'nc|ENSG00000163001|Q96G28-2|CFAP36', 'CFAP36|p.T51I|2|0.2|ENSG00000163001|chr2:55522138-55522138|C/T|missense_variant'] 95770 5481 SCSLHYIHP True PC9_epitope_Rep2 1055.4858503295102 1055.48474993586 26.478 2 -1.436868454421218 0.4002329877740254 1.0 ['ENSG00000196353|ENST00000429747|CPNE4', 'nc|ENSG00000196353|Q96A23-2|CPNE4'] 81432 23286 PQEPPKFP True H1975_Epitope_Rep3 938.4861675993399 938.48506993586 97.217 2 -1.436991006318658 0.40027534594747244 1.0 ['nc|ENSG00000144504|Q9P2S6-4|ANKMY1', 'nc|ENSG00000144504|Q9P2S6-2|ANKMY1', 'nc|ENSG00000144504|Q9P2S6|ANKMY1', 'ENSG00000144504|ENST00000401804|ANKMY1', 'ENST00000484526.5_1_2:241463300-241500177:-|nuORF', 'ENST00000480230.5_1_2:241463300-241465350:-|nuORF', 'ENST00000459901.5_1_2:241463300-241492642:-|nuORF', 'nc|ENSG00000144504|Q9P2S6-3|ANKMY1'] 19403 21322 ELPFIKSL True PC9_epitope_Rep2 945.55351888317 945.55242993586 87.479 2 -1.437103188240754 0.400294169559334 1.0 ['ENSG00000157483|ENST00000288235|MYO1E'] 3203 12394 AGEPVLPP True H1975_Epitope_Rep1 778.4225047136199 778.4219549679301 52.707 1 -1.4372260750357644 0.40029651593773163 1.0 ['ENST00000357802.6_1_22:42970741-42976277:-|nuORF', 'ENST00000421116.1_1_22:42973213-42976277:-|nuORF'] 92853 18168 RRLREFAK True NCI_RA007_Epitope_Rep4 1074.6410455312998 1074.6399499358602 78.621 2 -1.4373192077882788 0.40029651593773163 1.0 ['ENSG00000135205|ENST00000285871|CCDC146', 'nc|ENSG00000135205|Q8IYE0-2|CCDC146'] 135968 2815 YFDLQRRLMI True NCI_RA007_Epitope_Rep2 1353.7227265499298 1353.7210949037901 15.278 3 -1.4373338803802291 0.40030357226902624 1.0 ['ENST00000431657.5_1_3:44409097-44442080:+|nuORF', 'nc|ENSG00000179152|Q8N3R3-4|TCAIM', 'ENSG00000179152|ENST00000342649|TCAIM'] 73626 15275 NGGRPVLR True NCI_RA007_Epitope_Rep3 867.50388335215 867.50278993586 67.632 2 -1.4373833457176808 0.4003223946628387 1.0 ['ENSG00000142798|ENST00000374695|HSPG2'] 111790 9847 TLQVGSVYRS True PC9_epitope_Rep4 1108.58767254576 1108.58656993586 45.527 2 -1.4374412574528228 0.40032945052359103 1.0 ['ENST00000514264.6_1_17:49242904-49243033:+|nuORF'] 11955 3986 DHSYDPDFNQL True NCI_RA007_Epitope_Rep2 1349.5524092358498 1349.55076490379 20.141 3 -1.4375186695767235 0.40034827216999447 1.0 ['ENSG00000068438|ENST00000348411|FTSJ1', 'ENST00000467954.5_1_X:48339852-48341236:+|nuORF', 'ENST00000490202.5_1_X:48339880-48341236:+|nuORF'] 67996 10656 LTLVLGGR True NCI_RA007_Epitope_Rep2 827.5228874612299 827.5217899358599 46.049 2 -1.4376769624889818 0.4003741484592849 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D'] 82926 3182 PWKKQHHHYAE True PC9_epitope_Rep1 1459.7109159962704 1459.70926490379 17.109 3 -1.4376783785821332 0.4003741484592849 1.0 ['OXGR1|p.S67Kfs*41|1|0.41|ENSG00000165621|chr13:96987560-96987561|-/T|frameshift_variant'] 110175 10689 TIDLKRNETPP True H1975_Epitope_Rep3 1282.6881148630198 1282.68700993586 46.19 2 -1.437725892116207 0.4003812033790621 1.0 ['nc|ENSG00000189367|Q6ZU52-2|KIAA0408', 'ENST00000368281.1_1_6:127765256-127771512:-|nuORF', 'ENSG00000189367|ENST00000483725|KIAA0408'] 19463 4603 ELQCHEAELQH True H1975_Epitope_Rep3 1335.58774919875 1335.5866499358601 22.828 2 -1.4377887640763554 0.40038825813283135 1.0 ['ENSG00000128596|ENST00000297788|CCDC136', 'nc|ENSG00000128596|Q96JN2-4|CCDC136', 'nc|ENSG00000128596|Q96JN2-2|CCDC136', 'ENST00000480137.1_1_7:128446747-128451900:+|nuORF', 'ENST00000485832.1_1_7:128446807-128447827:+|nuORF'] 15664 10455 ECFFVEPD True PC9_epitope_Rep1 984.3898842559997 984.38878993586 45.102 2 -1.4378388614419735 0.40040707798014025 1.0 ['ENSG00000055732|ENST00000370589|MCOLN3', 'nc|ENSG00000055732|Q8TDD5-2|MCOLN3'] 115912 10714 TVPKDRTSY True PC9_epitope_Rep6 1065.54547338061 1065.54436993586 52.023 2 -1.4379923485183275 0.40045648132897244 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'TNR|p.D691Efs*23|1|0.14|ENSG00000116147|chr1:175366117-175366119|AGG/T|frameshift_variant', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.L741I|1|0.39|ENSG00000116147|chr1:175365971-175365971|G/T|missense_variant'] 25813 15668 FGCCRDPNIY True PC9_epitope_Rep4 1186.48994973378 1186.4888499358601 68.194 2 -1.4380013779190073 0.40045648132897244 1.0 ['ENSG00000204595|ENST00000376650|DPRX'] 137799 15237 YPEAAAAS True H1975_Epitope_Rep2 778.3497336961799 778.34862993586 63.767 2 -1.4381027419406327 0.400484694477777 1.0 ['ENST00000264554.10_1_19:416804-417233:-|nuORF'] 120413 8443 VFSVPEDVAP True NCI_RA007_Epitope_Rep2 1058.5284263341398 1058.52732993586 37.483 2 -1.4381693872217949 0.400484694477777 1.0 ['ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant'] 76685 14584 NTLERREKHEK True PC9_epitope_Rep6 1438.7640737679396 1438.7629699358602 67.994 2 -1.438171363006932 0.400484694477777 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1'] 64786 15652 LRSWWPRWWWA True PC9_epitope_Rep5 1628.8153214951599 1628.81368490379 65.217 3 -1.4381714053188728 0.400484694477777 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 12377 10582 DKCKCCRFA True H1975_Epitope_Rep1 1072.4616268109598 1072.4605299358602 45.658 2 -1.438185803651101 0.4004917473500935 1.0 ['ZNF804B|p.G876Afs*14|1|0.17|ENSG00000182348|chr7:89335607-89335607|G/-|frameshift_variant', 'ZNF804B|p.P1078Rfs*8|1|0.11|ENSG00000182348|chr7:89336214-89336214|C/-|frameshift_variant', 'ZNF804B|p.I1255Nfs*76|1|0.46|ENSG00000182348|chr7:89336744-89336745|-/A|frameshift_variant', 'ENSG00000182348|ENST00000333190|ZNF804B'] 3363 8607 AGIAPNTMLAK True NCI_RA007_Epitope_Rep1 1085.59031539805 1085.58920993586 37.481 2 -1.438260635427119 0.4005176166107876 1.0 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK'] 79439 15295 PGPISPQIFLL True PC9_epitope_Rep5 1180.68559568188 1180.68394490379 63.842 3 -1.4383027502769343 0.4005176166107876 1.0 ['ENST00000316077.13_1_X:135300553-135300625:-|nuORF'] 16576 7399 EEQVRSFQVP True NCI_RA007_Epitope_Rep2 1217.6040508858898 1217.6029499358601 33.406 2 -1.438462043092376 0.40055996047337833 1.0 ['SIRT4|p.S208L|1|0.23|ENSG00000089163|chr12:120312581-120312581|C/T|missense_variant', 'ENSG00000089163|ENST00000202967|SIRT4'] 22161 7588 ETAHWKPPP True H1975_Epitope_Rep3 1061.52942939365 1061.52832993586 34.168 2 -1.4384888924644674 0.40056463945418186 1.0 ['ENST00000478866.5_1_1:161172175-161179984:+|nuORF', 'nc|ENSG00000158864|O75306-2|NDUFS2', 'ENSG00000158864|ENST00000676972|NDUFS2', 'ENST00000475570.1_1_1:161172175-161173338:+|nuORF'] 68618 18181 LVAADSLLEH True PC9_epitope_Rep2 1066.56587447202 1066.56476993586 75.239 2 -1.4385267706875995 0.40056463945418186 1.0 ['ENSG00000101412|ENST00000343380|E2F1'] 57111 17131 LEENLCYRDF True PC9_epitope_Rep1 1300.5757875327197 1300.57468993586 70.719 2 -1.4385373021488526 0.40056463945418186 1.0 ['ACTR2-TSGA10|1|fusion', 'ENSG00000135951|ENST00000393483|TSGA10'] 57322 18070 LEGQEIQVKAK True PC9_epitope_Rep2 1241.69795127073 1241.6968499358602 74.808 2 -1.438543607356229 0.40056463945418186 1.0 ['ENSG00000033030|ENST00000633063|ZCCHC8'] 109926 22030 THRRVRLHRH True NCI_RA007_Epitope_Rep2 1366.79190071198 1366.7908099358601 91.383 2 -1.4386443434321434 0.4005881315062048 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 93584 24372 RSTNIKKA True H1975_Epitope_Rep1 916.5454138109599 916.54430993586 101.06 2 -1.4386447081824756 0.4005881315062048 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586'] 20508 7910 EPVPAYFRP True PC9_epitope_Rep3 1074.54983048506 1074.5487299358601 35.407 2 -1.4386477644205264 0.4005881315062048 1.0 ['ENST00000567562.5_1_16:20814828-20817484:-|nuORF'] 14907 16122 DYKGDATVFF True PC9_epitope_Rep1 1161.5342399905699 1161.5331499358601 66.829 2 -1.438713701134677 0.4005881315062048 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 57099 13207 LEEMASGLNK True PC9_epitope_Rep1 1090.5328600915798 1090.5317699358602 55.664 2 -1.4387747194188507 0.4005881315062048 1.0 ['ENSG00000100883|ENST00000216774|SRP54', 'nc|ENSG00000100883|P61011-2|SRP54', 'ENST00000555535.1_1_14:35465915-35473764:+|nuORF'] 63180 11953 LNTEANVVR True NCI_RA007_Epitope_Rep1 1014.54580773378 1014.5447099358599 50.48 2 -1.4388175726284969 0.4006069445751388 1.0 ['nc|ENSG00000116260|O00391-2|QSOX1', 'ENSG00000116260|ENST00000367602|QSOX1'] 32613 14289 GHFCLCPL True NCI_RA007_Epitope_Rep4 888.39861554824 888.39750993586 62.263 2 -1.4389302188437394 0.40062104495518597 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 137811 26518 YPEYLSNFP True H1975_Epitope_Rep2 1128.51277627 1128.51112490379 109.17 3 -1.438935586322295 0.40062104495518597 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 29558 18072 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 77.576 3 -1.4389762177364265 0.4006351446718419 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 17746 18868 EHTLAQLMQ True PC9_epitope_Rep1 1069.52262976105 1069.5215299358601 77.361 2 -1.439005391399775 0.4006351446718419 1.0 ['ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5'] 125041 17288 VLPGALQV True PC9_epitope_Rep2 795.4854393233501 795.48434993586 71.757 2 -1.4390585215495928 0.4006398193451261 1.0 ['ENSG00000145198|ENST00000691901|VWA5B2', 'ENST00000461141.5_1_3:183952309-183959823:+|nuORF'] 73596 4146 NGENLSFAYEF True NCI_RA007_Epitope_Rep2 1289.5564319871298 1289.55532993586 20.766 2 -1.4390665465797243 0.4006398193451261 1.0 ['nc|ENSG00000102802|Q5VYS4-2|MEDAG', 'ENSG00000102802|ENST00000380482|MEDAG'] 68090 11423 LTPDAMRSQ True PC9_epitope_Rep1 1017.49132963277 1017.49022993586 48.817 2 -1.4390855489307108 0.4006398193451261 1.0 ['nc|ENSG00000080802|O95628-6|CNOT4', 'ENST00000451834.5_1_7:135047437-135047593:-|nuORF'] 21856 8502 ESEDRLNRLDK True H1975_Epitope_Rep1 1373.68990576817 1373.68880993586 37.634 2 -1.4391022818098522 0.4006398193451261 1.0 ['ENSG00000118292|ENST00000369099|C1orf54'] 61555 15102 LLGISTHPE True PC9_epitope_Rep5 965.5181960036101 965.51708993586 63.096 2 -1.4391176812238216 0.4006468685680682 1.0 ['ENSG00000165202|ENST00000297913|OR1Q1'] 11285 24976 DESKKLLV True PC9_epitope_Rep5 930.5385970950199 930.53750993586 101.24 2 -1.439138690995163 0.400653917625197 1.0 ['ENSG00000115718|ENST00000234071|PROC', 'nc|ENSG00000115718|P04070-2|PROC'] 25301 13592 FEEKHRRDF True H1975_Epitope_Rep1 1262.6156186290998 1262.6145299358602 57.411 2 -1.4393034933236228 0.4006727274865631 1.0 ['ENST00000396060.6_1_15:59931232-59931334:-|nuORF'] 8754 9565 AVDYLLYRLIF True H1975_Epitope_Rep1 1384.77547331544 1384.77436993586 41.715 2 -1.4393849917045376 0.40067506380176177 1.0 ['ENSG00000164935|ENST00000297581|DCSTAMP'] 107822 19843 TAQNDTLLLEK True H1975_Epitope_Rep2 1244.66123140884 1244.65957490379 82.31 3 -1.4394056259360022 0.40067506380176177 1.0 ['nc|ENSG00000186409|Q5VVM6-2|CCDC30', 'nc|ENSG00000186409|Q5VVM6|CCDC30', 'ENSG00000186409|ENST00000657597|CCDC30'] 81197 23304 PPLMIPIF True PC9_epitope_Rep3 926.52994698762 926.52884993586 94.918 2 -1.4395247195805814 0.40070563330589204 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6'] 137549 20922 YLRQQILFYQR True PC9_epitope_Rep3 1526.83578215622 1526.83414490379 85.753 3 -1.4395732387935474 0.40071268125742376 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 111193 20427 TLFLQTVW True H1975_Epitope_Rep3 1006.5487678559 1006.54766993586 85.406 2 -1.439597060778411 0.40071972904318376 1.0 ['ENST00000479747.1_1_9:130678362-130679146:-|nuORF'] 30434 7531 GAGAPILGSQ True PC9_epitope_Rep4 869.46068112749 869.45958993586 36.336 2 -1.4396196799467622 0.4007385368033587 1.0 ['ENST00000560869.5_2_14:103601703-103601949:+|nuORF'] 95854 13736 SDLPKYLLF True H1975_Epitope_Rep1 1094.60119735158 1094.60010993586 57.976 2 -1.4397011525566499 0.4007526312694773 1.0 ['ENST00000321341.10_2_18:48473838-48473949:+|nuORF'] 121277 4177 VGGWWGGW True PC9_epitope_Rep3 903.4027723285499 903.40166993586 21.184 2 -1.4397129005453257 0.4007526312694773 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 93403 7642 RRWTCCSVP True NCI_RA007_Epitope_Rep2 1106.5113538847 1106.5102499358602 34.35 2 -1.439763222836794 0.40075492109781047 1.0 ['ENST00000300648.6_1_12:120593516-120594359:-|nuORF'] 121280 4564 VGGWWGGW True PC9_epitope_Rep5 903.4027723285499 903.40166993586 22.62 2 -1.4398469564199852 0.40075492109781047 1.0 ['ENST00000502271.5_1_5:53180101-53180530:-|nuORF'] 114966 24720 TTILLLKLL True NCI_RA007_Epitope_Rep1 1026.7052684972998 1026.70467496793 102.36 1 -1.4398552642784068 0.40075492109781047 1.0 ['ENST00000317025.12_1_8:38131368-38131458:-|nuORF'] 25869 22179 FGGVVTIV True H1975_Epitope_Rep3 790.45889022234 790.45778993586 92.753 2 -1.4398872400926084 0.40075492109781047 1.0 ['ENST00000582618.1_1_18:21946774-21948319:-|nuORF'] 111398 7534 TLKEAALA True PC9_epitope_Rep5 815.4752685624699 815.47416993586 33.927 2 -1.4398944476356315 0.40075492109781047 1.0 ['ENST00000416179.1_1_21:43916935-43917360:+|nuORF'] 406 18489 AALLLSGIPAE True H1975_Epitope_Rep1 1053.6070110080097 1053.6059099358602 77.075 2 -1.4399265259169758 0.40075492109781047 1.0 ['ENSG00000164615|ENST00000297156|CAMLG'] 83223 8878 QAAKDQFNEGR True NCI_RA007_Epitope_Rep4 1262.6003624877796 1262.59926993586 40.975 2 -1.4399630912670751 0.40075492109781047 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant'] 104188 9522 SSDEEWNIP True H1975_Epitope_Rep3 1075.44581890899 1075.44472993586 41.632 2 -1.440039164083207 0.4007690136870326 1.0 ['nc|ENSG00000172661|Q9Y4E1-3|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-2|WASHC2C', 'nc|ENSG00000172661|Q9Y4E1-1|WASHC2C'] 118399 6792 VDLIFLNTEV True NCI_RA007_Epitope_Rep4 1161.62814037541 1161.62650490379 32.748 3 -1.440119530999189 0.4007690136870326 1.0 ['ENSG00000124160|ENST00000290231|NCOA5'] 127997 20692 VRQLRHLHRTR True NCI_RA007_Epitope_Rep5 1470.8756303359398 1470.87397490379 86.552 3 -1.4403544159383637 0.40078781821388676 1.0 ['nc|ENSG00000184274|P59091|LINC00315'] 118596 12914 VEAHFKHK True PC9_epitope_Rep1 994.5348491272599 994.53374993586 54.547 2 -1.4404514210763857 0.4008017681220757 1.0 ['nc|ENSG00000105963|O75689-3|ADAP1', 'ENSG00000105963|ENST00000265846|ADAP1', 'nc|ENSG00000105963|O75689-2|ADAP1', 'ENST00000478000.5_1_7:938560-944975:-|nuORF'] 63705 10351 LPQLLRTN True PC9_epitope_Rep2 953.5658149023701 953.56470993586 45.14 2 -1.4404531193405044 0.4008017681220757 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|42|1|sense'] 136784 22619 YIRRVRMRP True PC9_epitope_Rep4 1245.7240639626098 1245.72241490379 95.234 3 -1.4404648961218809 0.4008017681220757 1.0 ['ENSG00000163682|ENST00000295955|RPL9', 'ENST00000511075.5_1_4:39457912-39460059:-|nuORF', 'ENST00000561773.1_1_15:66671752-66672088:-|nuORF'] 2738 5141 AETWDFFF True PC9_epitope_Rep3 1061.4494477374499 1061.44834993586 24.861 2 -1.4405894485191943 0.4008017681220757 1.0 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000432916.5_1_22:45122508-45132738:+|nuORF', 'nc|ENSG00000186654|P85299-2|PRR5', 'nc|ENSG00000186654|P85299-4|PRR5', 'ENST00000455389.3_1_22:45126703-45133124:+|nuORF', 'ENST00000495017.5_1_22:45127230-45133124:+|nuORF'] 91308 19317 RMDGLQRALQA True H1975_Epitope_Rep1 1257.66118892253 1257.66008993586 80.475 2 -1.4406527515375702 0.4008017681220757 1.0 ['EMILIN3|p.E399Q|1|0.38|ENSG00000183798|chr20:41362374-41362374|C/G|missense_variant'] 79520 5668 PGRDEDFV True PC9_epitope_Rep1 933.4192102383299 933.41810993586 26.623 2 -1.4406646678027255 0.4008017681220757 1.0 ['ENSG00000131507|ENST00000253814|NDFIP1'] 3004 7331 AFPGRALG True PC9_epitope_Rep1 787.4340724568299 787.43296993586 33.01 2 -1.440696360050607 0.4008017681220757 1.0 ['ENST00000329967.10_1_14:105223084-105225970:+|nuORF'] 136535 22593 YHRRVHTG True PC9_epitope_Rep2 1024.5314950823197 1024.53038993586 92.404 2 -1.4407064748073282 0.4008017681220757 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 56327 6298 LDREQTDRYEF True H1975_Epitope_Rep3 1470.6739213508597 1470.6728299358601 29.23 2 -1.440721146256224 0.4008017681220757 1.0 ['ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7'] 18842 9739 ELEERLWE True PC9_epitope_Rep2 1102.5294889632999 1102.52838993586 42.802 2 -1.4408407332893083 0.4008017681220757 1.0 ['nc|ENSG00000088899|O60299-2|LZTS3', 'ENSG00000088899|ENST00000337576|LZTS3'] 42196 19533 IEGFMLSK True NCI_RA007_Epitope_Rep1 923.4786396907499 923.47809496793 80.143 1 -1.4408736799477966 0.4008017681220757 1.0 ['nc|ENSG00000292339|O95671-3|ASMTL', 'ENSG00000169093|ENST00000381317|ASMTL', 'nc|ENSG00000292339|O95671-2|ASMTL'] 45297 23118 ISALLRRRRRR True H1975_Epitope_Rep3 1451.93856494567 1451.93692490379 96.547 3 -1.4408805707875931 0.4008017681220757 1.0 ['ENSG00000197380|ENST00000391916|DACT3'] 19049 10465 ELGPGVKA True H1975_Epitope_Rep1 769.43340375049 769.4328549679301 45.208 1 -1.4409022649222414 0.4008017681220757 1.0 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1'] 119137 6131 VEILEALSFSM True NCI_RA007_Epitope_Rep1 1237.62642612325 1237.62532993586 27.885 2 -1.440960452736759 0.4008017681220757 1.0 ['CES3|p.S424Efs*27|1|0.12|ENSG00000172828|chr16:66971296-66971314|TCAGTTTTTCAAGATACCT/-|frameshift_variant'] 28613 8466 FSRCWEFLLWM True PC9_epitope_Rep4 1516.6995485771997 1516.69789490379 40.034 3 -1.4410003279697265 0.4008017681220757 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF', 'ENST00000416953.2_1_12:133210721-133212582:-|nuORF'] 15346 7521 EALESGVF True PC9_epitope_Rep2 850.4072485722999 850.40614993586 34.297 2 -1.4410254131152105 0.4008017681220757 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF', 'ENST00000539215.5_1_12:133249167-133250211:-|nuORF', 'ENST00000545015.1_1_12:133249164-133249818:-|nuORF'] 110641 20311 TIVFNKLS True NCI_RA007_Epitope_Rep3 920.53311779176 920.53202993586 88.491 2 -1.4410484065100722 0.4008017681220757 1.0 ['ENSG00000150051|ENST00000419761|MKX'] 30341 10258 GADYFKKRLK True PC9_epitope_Rep2 1224.69789170108 1224.6967899358601 44.79 2 -1.4411671766592091 0.4008181882303153 1.0 ['ENST00000555711.5_1_12:25357018-25357243:+|nuORF', 'ENSG00000205707|ENST00000381356|ETFRF1'] 110855 19448 TKYKIMKFKS True NCI_RA007_Epitope_Rep5 1272.72641494804 1272.7247549037902 81.694 3 -1.4411956644931034 0.4008181882303153 1.0 ['nc|ENSG00000101868|P09884|POLA1', 'ENSG00000101868|ENST00000379068|POLA1'] 66204 10086 LSPNLWKL True PC9_epitope_Rep3 969.5647522732099 969.56364993586 43.749 2 -1.4411957198171859 0.4008181882303153 1.0 ['ENST00000370397.7_1_10:101949201-101949339:-|nuORF'] 111145 10181 TLERSQLLP True H1975_Epitope_Rep3 1055.5975089534697 1055.59640993586 44.207 2 -1.4411959309934192 0.4008181882303153 1.0 ['ENST00000521259.1_1_8:87516185-87516770:+|nuORF'] 67899 10392 LTKTQELGRDY True H1975_Epitope_Rep2 1322.68302948258 1322.6819299358601 44.984 2 -1.4412335746323595 0.4008252318760506 1.0 ['ENST00000491234.1_1_2:85922299-85923236:+|nuORF', 'ENST00000482900.5_1_2:85921541-85923236:+|nuORF', 'ENST00000489214.5_1_2:85922010-85923236:+|nuORF', 'nc|ENSG00000115523|P22749-2|GNLY', 'ENST00000533041.5_1_2:85922010-85923777:+|nuORF', 'ENSG00000115523|ENST00000263863|GNLY', 'ENST00000489980.5_1_2:85922183-85924200:+|nuORF'] 137923 10866 YPQWRRIH True PC9_epitope_Rep5 1154.6097454030198 1154.60864993586 46.784 2 -1.4413646546595724 0.4008745841610928 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 79633 13815 PHEGSFGF True NCI_RA007_Epitope_Rep5 876.37661715036 876.37552993586 59.815 2 -1.4413685307793138 0.4008745841610928 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 70600 9209 LYYYRDRDWRW True NCI_RA007_Epitope_Rep2 1690.8004592766597 1690.7988149037901 40.43 3 -1.4415580192192412 0.40088162689549783 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 47167 6980 IWRFYFEGFFD True PC9_epitope_Rep6 1525.7030366511697 1525.70140490379 35.817 3 -1.4416357112759106 0.4009004243514241 1.0 ['ENSG00000136240|ENST00000258739|KDELR2'] 131337 5419 VVRNMEMEKFL True NCI_RA007_Epitope_Rep5 1394.7050278804597 1394.70337490379 27.533 3 -1.441680052783058 0.4009309761143502 1.0 ['ENST00000502726.5_1_4:47685742-47840047:-|nuORF', 'ENST00000503821.5_1_4:47663725-47840047:-|nuORF', 'nc|ENSG00000145244|Q9Y5Q5-2|CORIN', 'ENSG00000145244|ENST00000273857|CORIN'] 44196 12555 ILRWSLVLSPM True H1975_Epitope_Rep3 1313.7529640490498 1313.7518699358602 53.492 2 -1.4417939981772636 0.4009638554216867 1.0 ['AluSz_dup102163|chr22:37886915-37887229:-|1.347823609642715|0.0002179491274605|12.59|502.0|15|1|anti-sense'] 100517 13819 SLPRAALPAL True PC9_epitope_Rep4 1007.6127650947898 1007.61166993586 61.051 2 -1.441824584186603 0.4009638554216867 1.0 ['ENST00000258526.8_1_12:94542512-94542695:+|nuORF'] 67372 14812 LTDTEIRI True PC9_epitope_Rep2 959.52876068731 959.52766993586 62.239 2 -1.4419207311222195 0.4009638554216867 1.0 ['ENSG00000091106|ENST00000402280|NLRC4', 'nc|ENSG00000091106|Q9NPP4-2|NLRC4'] 102713 14259 SQDSKKVEI True PC9_epitope_Rep1 1032.5451390274397 1032.5440499358601 59.671 2 -1.4420041112761437 0.4009779376329678 1.0 ['nc|ENSG00000172175|Q9UDY8-2|MALT1', 'ENSG00000172175|ENST00000649217|MALT1'] 7473 20499 ASDQLLPGV True PC9_epitope_Rep3 898.4759968384599 898.47488993586 84.11 2 -1.4420601937192818 0.4009779376329678 1.0 ['ENST00000569830.1_1_15:42840055-42840904:-|nuORF'] 93007 17670 RRRARWHWRHL True PC9_epitope_Rep3 1628.9137471801598 1628.9126499358601 73.161 2 -1.442119542736627 0.40098497849032655 1.0 ['ENST00000607222.1_1_1:1550199-1550712:-|nuORF'] 16662 6561 EETLDEGPP True H1975_Epitope_Rep2 985.4240208352498 985.42347496793 30.147 1 -1.4422451447057305 0.4010037729639512 1.0 ['ENSG00000100442|ENST00000396062|FKBP3'] 88756 11500 RDGDRLWYENP True PC9_epitope_Rep1 1419.6531263366296 1419.6520299358601 49.114 2 -1.442363933996268 0.4010248334058082 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 80030 21253 PKGKAPLRARS True PC9_epitope_Rep6 1179.72002412799 1179.7189299358602 94.603 2 -1.4423870685082054 0.4010248334058082 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 127465 10803 VQSRVPTL True PC9_epitope_Rep3 898.5236157372199 898.52250993586 46.521 2 -1.4424380801723498 0.4010248334058082 1.0 ['nc|ENSG00000173898|O15020-2|SPTBN2', 'ENSG00000173898|ENST00000533211|SPTBN2', 'SPTBN2|p.Q1708Rfs*19|2|0.3|ENSG00000173898|chr11:66692595-66692604|GGATCCACTG/-|frameshift_variant'] 81016 14700 PNTGKKNAK True NCI_RA007_Epitope_Rep3 956.5403284305199 956.53922993586 65.219 2 -1.4424828112351586 0.4010248334058082 1.0 ['ENSG00000213585|ENST00000265333|VDAC1'] 56935 8976 LEDSLQAQ True PC9_epitope_Rep1 902.4345259493 902.43342993586 39.372 2 -1.4424835038885373 0.4010248334058082 1.0 ['ENSG00000197694|ENST00000372739|SPTAN1', 'nc|ENSG00000197694|Q13813-3|SPTAN1', 'nc|ENSG00000197694|Q13813|SPTAN1', 'SPTAN1|p.K1486Nfs*51|1|0.22|ENSG00000197694|chr9:128608237-128608237|C/-|frameshift_variant'] 17528 13196 EHINKTIAP True PC9_epitope_Rep1 1021.5556441414899 1021.55454993586 55.622 2 -1.442517455360217 0.4010248334058082 1.0 ['ENSG00000074800|ENST00000234590|ENO1', 'ENST00000464920.1_1_1:8921421-8930582:-|nuORF'] 60725 24914 LKAKKPQKRKP True H1975_Epitope_Rep3 1320.8717737421198 1320.8701349037901 103.64 3 -1.4426036739997063 0.4010248334058082 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 62199 14296 LLPPIHTY True H1975_Epitope_Rep3 952.5382031721999 952.53710993586 60.333 2 -1.442628344357561 0.4010248334058082 1.0 ['ENST00000478553.1_1_20:4763250-4763406:-|nuORF'] 22780 7007 EVDEFHLILEY True H1975_Epitope_Rep1 1405.67654711981 1405.6754499358601 31.987 2 -1.4427998318690332 0.40110238811583304 1.0 ['nc|ENSG00000159322|Q9BRR6-2|ADPGK', 'ENSG00000159322|ENST00000456471|ADPGK', 'ENST00000566509.5_1_15:73052730-73067416:-|nuORF', 'nc|ENSG00000159322|Q9BRR6-5|ADPGK', 'ENST00000569517.5_1_15:73047978-73075652:-|nuORF', 'ENST00000567941.5_1_15:73044684-73075795:-|nuORF', 'ENST00000569534.5_1_15:73044684-73076051:-|nuORF', 'ENST00000569058.1_1_15:73052730-73076051:-|nuORF'] 64672 23693 LRKILLRKFCQ True PC9_epitope_Rep2 1416.8751448704 1416.87404993586 96.608 2 -1.4428454675506144 0.4011211790008109 1.0 ['nc|ENSG00000050628|P43115-7|PTGER3', 'nc|ENSG00000050628|P43115-10|PTGER3', 'nc|ENSG00000050628|P43115-3|PTGER3', 'nc|ENSG00000050628|P43115-2|PTGER3', 'ENSG00000050628|ENST00000306666|PTGER3', 'nc|ENSG00000050628|P43115-8|PTGER3', 'nc|ENSG00000050628|P43115-9|PTGER3', 'nc|ENSG00000050628|P43115-11|PTGER3', 'nc|ENSG00000050628|P43115-4|PTGER3', 'nc|ENSG00000050628|P43115-5|PTGER3', 'nc|ENSG00000050628|P43115-6|PTGER3', 'nc|ENSG00000050628|P43115-12|PTGER3'] 37058 16645 GVSFPKDNSC True PC9_epitope_Rep5 1052.4596951513201 1052.4585899358601 69.03 2 -1.442888319205821 0.401139969444118 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 8722 16211 AVDMMELYNRL True PC9_epitope_Rep3 1353.6420932707297 1353.64098993586 67.492 2 -1.4430557248239486 0.40116579701969635 1.0 ['nc|ENSG00000205629|Q9UIC8-2|LCMT1', 'ENST00000572869.1_1_16:25162908-25186269:+|nuORF', 'nc|ENSG00000205629|Q9UIC8-3|LCMT1', 'ENSG00000205629|ENST00000399069|LCMT1'] 126028 14779 VPAPPFSLGKL True PC9_epitope_Rep4 1124.65938093404 1124.65828993586 64.778 2 -1.443108917668356 0.40116579701969635 1.0 ['ENST00000456754.6_1_X:47444724-47445414:+|nuORF'] 63660 11513 LPPFDDIVDP True NCI_RA007_Epitope_Rep1 1126.55464108198 1126.55354993586 48.75 2 -1.4431362323018724 0.4011681199614544 1.0 ['ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3'] 140787 15261 YYRTGTFPETP True PC9_epitope_Rep2 1330.6193665968597 1330.61826993586 63.977 2 -1.4431485738488437 0.4011681199614544 1.0 ['ENSG00000026652|ENST00000320285|AGPAT4', 'nc|ENSG00000026652|Q9NRZ5-2|AGPAT4'] 114648 20991 TSPRCAGR True H1975_Epitope_Rep2 846.4130197424199 846.41192993586 86.89 2 -1.4432365905125735 0.40122216346436335 1.0 ['ENST00000584516.5_1_17:73585822-73586164:+|nuORF'] 126430 22002 VPLNIRLFL True PC9_epitope_Rep5 1083.68045073179 1083.67934993586 89.656 2 -1.443266140532202 0.4012291999623954 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC'] 14743 16360 DVVKVLSKTTE True H1975_Epitope_Rep3 1217.68671788069 1217.68562993586 68.403 2 -1.443431246737857 0.40130674406853356 1.0 ['ENSG00000214193|ENST00000453908|SH3D21', 'nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21'] 101078 14798 SLTSSPTPV True H1975_Epitope_Rep3 887.46001242115 887.4594649679301 62.299 1 -1.443440957272329 0.40131377940727164 1.0 ['OR2F1|p.L226Qfs*56|3|0.16|ENSG00000213215|chr7:143960647-143960647|T/-|frameshift_variant'] 1609 10146 AEFRHLERLQQ True NCI_RA007_Epitope_Rep2 1425.7476954278097 1425.7465899358601 44.054 2 -1.4435796152596425 0.4013348844314403 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614', 'nc|ENSG00000135835|Q5VZ46-2|KIAA1614'] 122562 5511 VGTDPSIRP True PC9_epitope_Rep2 940.4977949122 940.49668993586 26.589 2 -1.4435905838482677 0.4013348844314403 1.0 ['ENST00000268099.13_1_15:75140986-75142897:-|nuORF'] 111406 13491 TLKFYQKLLQK True H1975_Epitope_Rep3 1408.8442215816 1408.8431299358601 57.169 2 -1.4436250411143736 0.4013348844314403 1.0 ['ENSG00000171798|ENST00000304613|KNDC1'] 106234 11715 SVPRMPFE True PC9_epitope_Rep3 961.4691376362099 961.46804993586 50.08 2 -1.4437430810271326 0.4013536697139903 1.0 ['SMG7|p.P907S|1|0.13|ENSG00000116698|chr1:183546314-183546314|C/T|missense_variant'] 135343 17278 YDDKIYYF True NCI_RA007_Epitope_Rep4 1125.5018772331298 1125.50137496793 74.815 1 -1.4437929127356923 0.40137245455506854 1.0 ['nc|ENSG00000138623|O75326-2|SEMA7A', 'ENSG00000138623|ENST00000261918|SEMA7A'] 31122 18784 GCGGRGSK True PC9_epitope_Rep4 720.33370679256 720.33315496793 80.337 1 -1.4439842019932736 0.4013817250414165 1.0 ['ENSG00000185950|ENST00000375856|IRS2'] 76430 5227 NSVHFEMKPGV True NCI_RA007_Epitope_Rep5 1243.60194271091 1243.6008499358602 26.802 2 -1.4440150124469788 0.4013817250414165 1.0 ['SORCS1|p.L1073M|1|0.33|ENSG00000108018|chr10:106597399-106597399|G/T|missense_variant'] 98648 21755 SIPLCVEKIP True PC9_epitope_Rep6 1097.61546751673 1097.6143699358602 96.573 2 -1.4440184070716573 0.4013817250414165 1.0 ['nc|ENSG00000000971|P08603|CFH', 'ENSG00000000971|ENST00000367429|CFH', 'ENST00000466229.5_1_1:196648727-196709933:+|nuORF', 'CFH|p.Q859L|1|0.37|ENSG00000000971|chr1:196736986-196736986|A/T|missense_variant'] 47969 9439 KAFNHRLE True NCI_RA007_Epitope_Rep4 1013.54066278369 1013.53956993586 43.167 2 -1.444025161248802 0.4013817250414165 1.0 ['ZNF461|p.Q536E|1|0.13|ENSG00000197808|chr19:36638739-36638739|G/C|missense_variant'] 134035 19705 WQEWKQPRRDR True H1975_Epitope_Rep3 1583.8069416394296 1583.8058499358601 82.524 2 -1.4441114324252717 0.4013817250414165 1.0 ['ENST00000430935.5_1_7:138875731-138875803:+|nuORF'] 33968 17821 GNFEREFKN True NCI_RA007_Epitope_Rep3 1139.5359713260698 1139.5348699358601 78.142 2 -1.444237636027763 0.4013817250414165 1.0 ['nc|ENSG00000036549|Q8IYH5-3|ZZZ3', 'nc|ENSG00000036549|Q8IYH5-2|ZZZ3', 'ENSG00000036549|ENST00000370801|ZZZ3', 'ENST00000476275.5_1_1:78046613-78098535:-|nuORF', 'nc|ENSG00000036549|Q8IYH5-4|ZZZ3'] 2565 5106 AERPLTPAP True H1975_Epitope_Rep2 950.5185303567799 950.51742993586 24.72 2 -1.4442466889095706 0.4013817250414165 1.0 ['ENST00000441896.1_1_7:57059615-57063740:+|nuORF'] 133585 18091 WIFRPLYLFFF True PC9_epitope_Rep3 1547.8329286219093 1547.83182993586 74.784 2 -1.4442720933596782 0.4013817250414165 1.0 ['ENST00000508170.5_1_4:55131036-55131279:+|nuORF'] 45958 11854 ISSPFLNYRMT True PC9_epitope_Rep3 1327.65945758703 1327.65836993586 50.615 2 -1.4443118617579576 0.4013887583419494 1.0 ['ENSG00000118492|ENST00000397944|ADGB'] 58196 17073 LESPFRIL True PC9_epitope_Rep6 973.5596668927699 973.55856993586 78.24 2 -1.4443267416794419 0.40139107549874287 1.0 ['ENST00000395900.1_1_11:32457375-32459526:+|nuORF'] 68954 12361 LVGADPAH True PC9_epitope_Rep4 778.39735259494 778.39680496793 55.353 1 -1.4443356997714651 0.40139107549874287 1.0 ['ENST00000303277.6_1_4:1718443-1718770:-|nuORF'] 46505 21845 ITPNTYYFL True PC9_epitope_Rep2 1130.56481184286 1130.56370993586 89.501 2 -1.4445278863920838 0.4014097744360902 1.0 ['ENST00000367568.4_1_6:144509016-144509238:+|nuORF'] 107271 21294 SYQKMPLF True NCI_RA007_Epitope_Rep5 1012.5051887917599 1012.50408993586 88.956 2 -1.4446105968005 0.4014097744360902 1.0 ['ENSG00000131864|ENST00000254181|USP29'] 15005 5922 DYVYDVMWSPV True NCI_RA007_Epitope_Rep1 1372.6009396513998 1372.5998499358602 27.086 2 -1.4446918607022108 0.4014097744360902 1.0 ['nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 103076 23208 SQLHRPPPPPV True PC9_epitope_Rep2 1223.67749060967 1223.67583490379 94.752 3 -1.4447248786871367 0.4014097744360902 1.0 ['ENST00000252032.9_1_20:3362138-3388256:-|nuORF'] 37161 13534 GVTLAQDHFQE True PC9_epitope_Rep4 1243.58331544131 1243.5816749037901 59.955 3 -1.4447579742463768 0.4014097744360902 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13'] 61529 3493 LLGECAVP True NCI_RA007_Epitope_Rep2 800.4102257777599 800.40912993586 18.239 2 -1.444787099400144 0.4014097744360902 1.0 ['ENST00000571156.1_1_17:78181480-78183436:-|nuORF', 'ENST00000326317.10_1_17:78183109-78183520:-|nuORF'] 112441 22788 TNLRQLTKTSR True PC9_epitope_Rep4 1316.75244645508 1316.7508049037901 95.875 3 -1.4448648870648506 0.40142383872559384 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 92315 18084 RQLQLKLQEEL True NCI_RA007_Epitope_Rep5 1396.8038133215998 1396.80270993586 76.359 2 -1.4448909859558152 0.40142383872559384 1.0 ['ENSG00000236609|ENST00000457543|ZNF853'] 65391 17099 LSERGARQAR True PC9_epitope_Rep1 1142.62685201914 1142.62574993586 70.597 2 -1.4449378939066084 0.40142615478595933 1.0 ['ENST00000513178.1_1_4:47954638-48018683:-|nuORF'] 93551 16684 RSRAGPVL True NCI_RA007_Epitope_Rep4 854.5086343794198 854.50752993586 72.349 2 -1.4449417787175203 0.40142615478595933 1.0 ['ENST00000292377.3_1_7:99768105-99769260:-|nuORF', 'ENST00000590234.5_1_18:47810059-47811374:-|nuORF'] 139541 11977 YTLLNQAPD True NCI_RA007_Epitope_Rep4 1033.50802524273 1033.50747496793 53.073 1 -1.444959205280906 0.40143318649045523 1.0 ['ENSG00000145907|ENST00000356245|G3BP1', 'nc|ENSG00000145907|Q13283-2|G3BP1', 'ENST00000519832.1_1_5:151166169-151170647:+|nuORF', 'ENST00000518726.5_1_5:151166169-151166277:+|nuORF'] 118923 2707 VEEQVLDK True NCI_RA007_Epitope_Rep2 958.4971262058599 958.49602993586 14.756 2 -1.4451248000359094 0.4014378178998931 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2'] 60699 21667 LIWVWKKWMRA True NCI_RA007_Epitope_Rep2 1515.85368114983 1515.8525899358601 89.761 2 -1.445164100567444 0.4014378178998931 1.0 ['ENST00000360700.4_2_X:84502094-84502157:+|nuORF'] 36592 23191 GVLHTKFWVV True PC9_epitope_Rep2 1184.6706143240801 1184.6700749679298 94.686 1 -1.4452089271342476 0.4014378178998931 1.0 ['ENSG00000105223|ENST00000409735|PLD3', 'ENST00000480030.1_1_19:40875835-40876255:+|nuORF'] 87279 23307 QSSVVRCRPLT True PC9_epitope_Rep2 1244.6659399497998 1244.66484993586 95.126 2 -1.44521763739634 0.4014378178998931 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 41893 5130 IDYDRDRFDRE True NCI_RA007_Epitope_Rep1 1498.6800693604598 1498.67896993586 24.037 2 -1.4454410941833233 0.4014918360155057 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 79682 16456 PHLFAQLSKV True PC9_epitope_Rep3 1138.6498788795 1138.6482449037899 68.436 3 -1.445540042716008 0.4014988664528785 1.0 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1', 'CNOT1-GOT2|1|fusion'] 126746 11572 VPSEGDYR True H1975_Epitope_Rep1 921.4192102383299 921.41866496793 49.498 1 -1.4457609532903428 0.40151524050038173 1.0 ['ENSG00000124006|ENST00000404537|OBSL1', 'OBSL1|p.R1380Lfs*3|1|0.32|ENSG00000124006|chr2:219556651-219556652|-/A|frameshift_variant', 'nc|ENSG00000124006|O75147-1|OBSL1', 'nc|ENSG00000124006|O75147-4|OBSL1', 'nc|ENSG00000124006|O75147-2|OBSL1', 'ENST00000465149.1_1_2:220420747-220435459:-|nuORF'] 109193 4208 TFSKSSSA True NCI_RA007_Epitope_Rep5 813.38684748089 813.3862949679301 22.719 1 -1.4457768087680867 0.40151524050038173 1.0 ['ENSG00000141052|ENST00000425538|MYOCD', 'nc|ENSG00000141052|Q8IZQ8|MYOCD', 'nc|ENSG00000141052|Q8IZQ8-2|MYOCD'] 39656 7464 HPSADGTPFP True PC9_epitope_Rep1 1024.46140940348 1024.46030993586 33.527 2 -1.445853986024255 0.40151524050038173 1.0 ['ENSG00000116176|ENST00000234798|TPSG1'] 33933 4058 GMVTLHKLK True NCI_RA007_Epitope_Rep3 1025.60557153937 1025.6044699358602 22.441 2 -1.4459646826618155 0.40151524050038173 1.0 ['nc|ENSG00000172421|Q8N7B9-2|EFCAB3'] 55017 8831 LAKVEKAL True NCI_RA007_Epitope_Rep3 870.5538532363398 870.55274993586 41.828 2 -1.4460082380294141 0.4015645371577575 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'UTRN|p.Y2614Rfs*17|1|0.19|ENSG00000152818|chr6:144730378-144730379|-/AGAA|frameshift_variant', 'nc|ENSG00000152818|P46939-2|UTRN', 'UTRN|p.I1302Sfs*5|1|0.2|ENSG00000152818|chr6:144487623-144487623|G/-|frameshift_variant'] 133436 23069 WGDFQDGL True NCI_RA007_Epitope_Rep5 936.3977465177599 936.39664993586 95.982 2 -1.4460150278030013 0.4015645371577575 1.0 ['ENST00000261772.12_1_16:70316640-70323405:-|nuORF'] 81137 16369 PPIMLIGH True NCI_RA007_Epitope_Rep5 876.4891448047999 876.48859496793 69.72 1 -1.446083685781503 0.4015668495049272 1.0 ['ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 76368 13922 NSFWLNEDLI True NCI_RA007_Epitope_Rep2 1249.59790287629 1249.5968099358602 58.809 2 -1.446083866689011 0.4015668495049272 1.0 ['ENSG00000075407|ENST00000685332|ZNF37A'] 60698 21270 LIWVWKKWMRA True H1975_Epitope_Rep1 1515.85368114983 1515.8525899358601 88.363 2 -1.4461488740848152 0.40157387831806435 1.0 ['ENST00000360700.4_2_X:84502094-84502157:+|nuORF'] 70629 16232 MAPSWYLEY True PC9_epitope_Rep3 1158.50558271458 1158.50392490379 67.575 3 -1.4462101303568047 0.40159265218872225 1.0 ['nc|ENSG00000187243|Q96JG8-4|MAGED4'] 74777 22013 NLMDKSHC True PC9_epitope_Rep5 946.4000721002201 946.39896993586 89.699 2 -1.446225127527329 0.40159968053369666 1.0 ['ENSG00000173166|ENST00000319170|RAPH1', 'nc|ENSG00000173166|Q70E73-5|RAPH1', 'nc|ENSG00000173166|Q70E73-2|RAPH1', 'nc|ENSG00000173166|Q70E73-8|RAPH1', 'nc|ENSG00000173166|Q70E73-7|RAPH1', 'nc|ENSG00000173166|Q70E73-4|RAPH1', 'nc|ENSG00000173166|Q70E73-3|RAPH1', 'nc|ENSG00000173166|Q70E73-9|RAPH1', 'nc|ENSG00000173166|Q70E73-6|RAPH1'] 43580 24649 IIFIKLNL True PC9_epitope_Rep4 972.6371889374799 972.63608993586 103.31 2 -1.4462700881472992 0.4016018978496518 1.0 ['ENST00000344302.8_1_X:46332443-46332647:+|nuORF'] 43115 7467 IGNAAAVGQAA True PC9_epitope_Rep3 941.4930438849299 941.49194993586 33.726 2 -1.4463910361151069 0.4016018978496518 1.0 ['CYP1B1|p.D333Efs*20|1|0.31|ENSG00000138061|chr2:38074390-38074391|-/TCCT|frameshift_variant', 'ENSG00000138061|ENST00000610745|CYP1B1'] 11479 4846 DGDNNRTL True PC9_epitope_Rep1 903.40462280335 903.40352993586 23.509 2 -1.446455279275201 0.4016018978496518 1.0 ['CAPSL|p.D53G|1|0.19|ENSG00000152611|chr5:35910523-35910523|T/C|missense_variant'] 59072 12919 LGDPDPEQP True PC9_epitope_Rep2 966.42944056886 966.42834993586 54.988 2 -1.4464569572700055 0.4016018978496518 1.0 ['ENST00000588831.5_1_19:36428129-36428243:+|nuORF'] 101718 11157 SPGPLKSPQG True PC9_epitope_Rep5 966.51344497634 966.51234993586 47.901 2 -1.4465069227991703 0.4016018978496518 1.0 ['nc|ENSG00000242520|P43359|MAGEA5P'] 68158 15152 LTPRTPKV True PC9_epitope_Rep3 910.5600012459399 910.55890993586 63.423 2 -1.4465926317837234 0.4016018978496518 1.0 ['ENST00000511482.1_1_5:306832-313953:+|nuORF'] 102245 13310 SPTEDKVLAV True NCI_RA007_Epitope_Rep5 1057.5655401188499 1057.56444993586 57.877 2 -1.4466297802832848 0.4016018978496518 1.0 ['ENSG00000198128|ENST00000359959|OR2L3', 'ENSG00000279263|ENST00000623922|OR2L8'] 4363 19458 AIPSIMNVLP True NCI_RA007_Epitope_Rep4 1053.58925276889 1053.5881499358602 84.113 2 -1.4468310463230254 0.4016042089934352 1.0 ['SCN1A|p.L1352P|2|0.2|ENSG00000144285|chr2:166002701-166002701|A/G|missense_variant'] 137412 17752 YLLQVLRYLI True NCI_RA007_Epitope_Rep5 1292.7856440763198 1292.78454993586 75.067 2 -1.4468628088675237 0.4016042089934352 1.0 ['nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1'] 54737 4970 LAELYVEIES True NCI_RA007_Epitope_Rep5 1164.5914205135198 1164.5903299358602 25.819 2 -1.446920571705417 0.4016112363773018 1.0 ['CDH18|p.G782V|1|0.1|ENSG00000145526|chr5:19473254-19473254|C/A|missense_variant'] 16055 22678 EEAPVYSVPQ True PC9_epitope_Rep3 1117.5291546101298 1117.52857496793 92.503 1 -1.4469985449706182 0.40163000716357616 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D'] 111663 8163 TLPDGSRLQL True H1975_Epitope_Rep2 1098.6033226099 1098.6022299358601 36.349 2 -1.447073117135127 0.40163231753860607 1.0 ['ENSG00000124827|ENST00000379491|GCM2'] 16606 9536 EERRTKSWGE True H1975_Epitope_Rep1 1276.6160125519198 1276.6149099358602 41.603 2 -1.44709640159478 0.40163231753860607 1.0 ['nc|ENSG00000143772|P27987-2|ITPKB', 'ENSG00000143772|ENST00000429204|ITPKB'] 44411 18897 INEYWVLMA True H1975_Epitope_Rep3 1137.5528672601702 1137.5512349037901 79.257 3 -1.4471785190099395 0.4016346278051129 1.0 ['C1S|p.T472M|1|0.09|ENSG00000182326|chr12:7069999-7069999|C/T|missense_variant'] 120667 10335 VGAPGDIWA True PC9_epitope_Rep5 884.43921740692 884.43812993586 44.737 2 -1.4472189922198089 0.4016346278051129 1.0 ['ENST00000403325.5_1_22:19808897-19842309:-|nuORF', 'ENST00000405640.1_1_22:19839984-19842309:-|nuORF'] 42909 19391 IFVLLSRLQDL True PC9_epitope_Rep4 1315.7863723523099 1315.78526993586 82.698 2 -1.4473287846209137 0.4016768829704784 1.0 ['ENST00000602540.5_1_12:76422921-76423041:-|nuORF'] 44972 12395 IQHRERRERSR True NCI_RA007_Epitope_Rep2 1521.8348877227697 1521.83378993586 52.821 2 -1.447444536159105 0.40169565166335913 1.0 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1', 'ENST00000536066.1_1_12:2967806-2973707:-|nuORF'] 45940 5834 ISSDYYIW True PC9_epitope_Rep5 1045.47566248529 1045.47456993586 27.432 2 -1.4475428084479933 0.4016978606486156 1.0 ['MNAT1-AP5M1|2|fusion', 'MNAT1-AP5M1|1|fusion', 'ENSG00000053770|ENST00000261558|AP5M1'] 37135 16983 GVTEKETK True NCI_RA007_Epitope_Rep5 890.4709114580199 890.4703649679301 72.085 1 -1.4475685343475995 0.4016978606486156 1.0 ['ENST00000361028.5_1_6:28348556-28348682:-|nuORF', 'ENST00000396827.3_1_6:28348556-28350043:-|nuORF'] 102297 6900 SPVEFTGHK True NCI_RA007_Epitope_Rep2 1000.4977949122 1000.49668993586 31.458 2 -1.4475858834134723 0.4016978606486156 1.0 ['ENSG00000162408|ENST00000377705|NOL9', 'ENST00000462798.1_1_1:6592521-6593409:-|nuORF'] 110723 4312 TKERHQEC True PC9_epitope_Rep2 1029.4661775140898 1029.46508993586 21.924 2 -1.4475984734432743 0.4016978606486156 1.0 ['ZNF2|p.K193Rfs*41|1|0.15|ENSG00000275111|chr2:95181363-95181363|G/-|frameshift_variant', 'ZNF2|p.P381Rfs*7|1|0.13|ENSG00000275111|chr2:95181928-95181941|AGCCATATGAATGC/-|frameshift_variant', 'nc|ENSG00000275111|Q9BSG1-3|ZNF2', 'nc|ENSG00000275111|Q9BSG1-4|ZNF2', 'ENSG00000275111|ENST00000614034|ZNF2'] 88758 11007 RDGDRLWYENP True PC9_epitope_Rep2 1419.6531263366296 1419.6520299358601 47.66 2 -1.4476460920410728 0.4016978606486156 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 83662 6960 QEAHWVLCEVL True H1975_Epitope_Rep3 1325.6438075228898 1325.64270993586 31.733 2 -1.4477266408274214 0.4016978606486156 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 39829 20104 HQFPYAHPL True PC9_epitope_Rep3 1108.5454138109599 1108.5443099358602 82.583 2 -1.4477296852236965 0.4016978606486156 1.0 ['nc|ENSG00000142973|P13584|CYP4B1', 'ENSG00000142973|ENST00000371923|CYP4B1'] 35246 21502 GSKGVKFM True NCI_RA007_Epitope_Rep5 852.45275929608 852.45166993586 89.779 2 -1.4478944709697343 0.40171662733218266 1.0 ['nc|ENSG00000174227|Q5H8A4-4|PIGG', 'nc|ENSG00000174227|Q5H8A4-2|PIGG', 'ENSG00000174227|ENST00000453061|PIGG', 'ENST00000502311.1_1_4:493115-495466:+|nuORF', 'nc|ENSG00000174227|Q5H8A4-3|PIGG'] 41995 21272 IEDLEELDP True PC9_epitope_Rep5 1071.49718577551 1071.49667496793 86.874 1 -1.4479961800952377 0.4017588765733609 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 67580 9325 LTESPSPDP True H1975_Epitope_Rep1 941.43419159613 941.43364496793 40.776 1 -1.4481396084256533 0.40178466596219325 1.0 ['ENST00000270645.7_1_19:50046533-50046872:+|nuORF'] 111857 20456 TLRKILFEDFR True PC9_epitope_Rep1 1436.81398408248 1436.81288993586 83.495 2 -1.4481436757621016 0.40178466596219325 1.0 ['ENSG00000087263|ENST00000566157|OGFOD1'] 134370 17983 WSLEDLMQIR True NCI_RA007_Epitope_Rep3 1289.6438075228898 1289.64217490379 78.804 3 -1.4482355682002925 0.4017939957498268 1.0 ['ENST00000261015.4_1_2:203776641-203776755:-|nuORF'] 26808 6481 FLEEATEA True PC9_epitope_Rep5 908.4127278755599 908.41162993586 29.901 2 -1.4482730451170853 0.4017939957498268 1.0 ['ENST00000505030.5_1_5:87961954-87962140:-|nuORF'] 115017 15729 TTLTSRRTTRI True NCI_RA007_Epitope_Rep1 1304.75244645508 1304.7513499358602 65.277 2 -1.448342265519066 0.4017939957498268 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 127817 23534 VRLKLQHT True H1975_Epitope_Rep2 993.60834842069 993.60724993586 97.004 2 -1.4483634118901088 0.4018010190903327 1.0 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158', 'ENST00000504667.2_1_4:77255161-77272959:-|nuORF'] 23589 11032 EYDQPWEWNRV True NCI_RA007_Epitope_Rep1 1520.6684420476 1520.66734993586 46.908 2 -1.448437114871113 0.40180332488024795 1.0 ['ENSG00000107338|ENST00000377707|SHB'] 59218 10081 LGGDLLRALN True NCI_RA007_Epitope_Rep3 1040.59784330664 1040.59674993586 46.747 2 -1.4484604792627707 0.40180332488024795 1.0 ['ENSG00000160255|ENST00000652462|ITGB2', 'ENST00000498666.5_1_21:46314678-46340855:-|nuORF', 'ENST00000521987.1_1_21:46321596-46323430:-|nuORF'] 97757 13409 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 58.263 2 -1.4484775044178038 0.40181034786385994 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 61021 19492 LLAQEIRDSK True PC9_epitope_Rep5 1171.6560864587498 1171.6549899358602 80.031 2 -1.448588535555458 0.40182669844214086 1.0 ['ENST00000590054.5_1_19:11457292-11462950:+|nuORF', 'nc|ENSG00000183401|P0C7I6-7|CCDC159', 'ENSG00000183401|ENST00000458408|CCDC159'] 61918 19273 LLLLLLLL True PC9_epitope_Rep4 922.68307650074 922.68196993586 82.237 2 -1.4486253693900895 0.40182669844214086 1.0 ['ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'UCN3|p.P18H|1|0.47|ENSG00000178473|chr10:5373773-5373773|C/A|missense_variant', 'PLBD1|p.N149Ifs*17|1|0.25|ENSG00000121316|chr12:14540881-14540881|C/-|frameshift_variant', 'ENSG00000183971|ENST00000566435|NPW', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000182685|ENST00000328540|BRICD5', 'ENSG00000117899|ENST00000261758|MESD', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENSG00000184709|ENST00000371542|LRRC26', 'FAT1|p.H507Rfs*6|1|0.13|ENSG00000083857|chr4:186708307-186708308|AT/-|frameshift_variant', 'ENSG00000121316|ENST00000240617|PLBD1', 'FAT1|p.N618Tfs*9|1|0.18|ENSG00000083857|chr4:186707975-186707975|T/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENSG00000178473|ENST00000380433|UCN3', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENSG00000070031|ENST00000176195|SCT', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'nc|ENSG00000117899|Q14696-2|MESD', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-4|SHBG', 'nc|ENSG00000129214|P04278-3|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000129214|P04278-5|SHBG', 'ENSG00000129214|ENST00000380450|SHBG', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000125810|ENST00000246006|CD93', 'ENSG00000109758|ENST00000382774|HGFAC', 'SHBG|p.L175Afs*39|1|0.14|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'CD93|p.E121Rfs*79|1|0.71|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'ENSG00000167680|ENST00000586582|SEMA6B', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ADGRB1|p.D708Tfs*49|1|0.15|ENSG00000181790|chr8:142481700-142481700|G/-|frameshift_variant', 'ATRN-TNKS2|2|fusion', 'ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant', 'ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000162337|ENST00000294304|LRP5', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 29539 26152 FVIFMFFLN True PC9_epitope_Rep1 1176.6041745570399 1176.60253490379 105.91 3 -1.4486393465177312 0.40182669844214086 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 15740 16222 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 69.143 2 -1.4486620987645586 0.40182669844214086 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 30464 9433 GAGGRRTR True PC9_epitope_Rep5 829.4630811693299 829.46198993586 41.239 2 -1.448732205464323 0.40184546030851587 1.0 ['ENST00000316939.2_1_19:13065244-13067802:-|nuORF'] 60281 5085 LIENEEPV True PC9_epitope_Rep5 941.4705771048499 941.46948993586 24.585 2 -1.4488550259640647 0.40187596116596036 1.0 ['ENSG00000166135|ENST00000299163|HIF1AN'] 62339 19119 LLRHRLKTHTT True NCI_RA007_Epitope_Rep4 1374.82080079842 1374.8191649037901 82.687 3 -1.448918683728568 0.40189472201352366 1.0 ['ENSG00000050426|ENST00000262055|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-7|LETMD1', 'nc|ENSG00000050426|Q6P1Q0-2|LETMD1', 'ENST00000549395.1_1_12:51450168-51451905:+|nuORF', 'ENST00000380135.7_1_12:51450138-51451833:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-5|LETMD1', 'ENST00000546814.1_1_12:51450084-51453211:+|nuORF', 'ENST00000552433.1_1_12:51449776-51450294:+|nuORF', 'ENST00000548516.5_1_12:51450138-51453211:+|nuORF', 'nc|ENSG00000050426|Q6P1Q0-4|LETMD1'] 14788 14403 DWVPRYTGV True PC9_epitope_Rep6 1091.53999407735 1091.5388899358602 67.299 2 -1.4489715570791148 0.4019252215765686 1.0 ['nc|ENSG00000158859|O75173-2|ADAMTS4', 'ENSG00000158859|ENST00000367996|ADAMTS4'] 59446 7616 LGMRDHPP True PC9_epitope_Rep6 921.4490708979699 921.44796993586 38.581 2 -1.4490794074104614 0.40194628351411 1.0 ['ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 57382 11446 LEHLRITV True PC9_epitope_Rep6 979.58146496651 979.58036993586 55.087 2 -1.4491007663275062 0.40194628351411 1.0 ['ENSG00000156510|ENST00000354624|HKDC1'] 86087 7712 QPQFGEDLIL True H1975_Epitope_Rep1 1158.5920892198599 1158.59098993586 34.626 2 -1.449102310549256 0.40194628351411 1.0 ['RYR2|p.H3115P|1|0.25|ENSG00000198626|chr1:237700444-237700444|A/C|missense_variant'] 44799 11948 IPTTVDTKDLP True NCI_RA007_Epitope_Rep2 1198.64451871554 1198.64342993586 51.077 2 -1.4494243426643123 0.4019579073398049 1.0 ['ENSG00000112297|ENST00000633556|CRYBG1', 'nc|ENSG00000112297|Q9Y4K1-1|CRYBG1'] 130484 9923 VTVPSPPP True NCI_RA007_Epitope_Rep5 792.43815477776 792.43704993586 44.811 2 -1.4494657580718036 0.4019579073398049 1.0 ['nc|ENSG00000141441|Q9H706-2|GAREM1', 'nc|ENSG00000141441|Q9H706-3|GAREM1', 'ENSG00000141441|ENST00000269209|GAREM1', 'GAREM1|p.H269Sfs*4|1|0.3|ENSG00000141441|chr18:32287792-32287793|-/A|frameshift_variant'] 13075 27247 DLRVHMRNLHA True PC9_epitope_Rep1 1360.7146214777201 1360.7129849037901 111.35 3 -1.4494908092825882 0.4019579073398049 1.0 ['nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-11|CTCFL', 'nc|ENSG00000124092|Q8NI51-6|CTCFL', 'chr20:57512752-57514592|125|72.96|0.29|7.97|-|2|CTCFL,CTCFL|1'] 62186 11032 LLPNDQLYQP True PC9_epitope_Rep6 1199.61863832087 1199.61700490379 53.34 3 -1.4494938649209526 0.4019579073398049 1.0 ['ENSG00000160654|ENST00000532917|CD3G', 'TMEM25-CD3G|2|fusion', 'TMEM25-CD3G|1|fusion', 'TMEM25-CD3G|3|fusion'] 126616 21404 VPPQRPRR True PC9_epitope_Rep3 1004.5991807193199 1004.59808993586 87.624 2 -1.4495041505259685 0.4019579073398049 1.0 ['ENST00000565396.5_1_16:2052722-2053019:-|nuORF'] 112916 16959 TPQRSVPEV True PC9_epitope_Rep2 1011.5349086969098 1011.53380993586 70.479 2 -1.4495494705920975 0.4019649271075428 1.0 ['ENSG00000175662|ENST00000379504|TOM1L2', 'nc|ENSG00000175662|Q6ZVM7-2|TOM1L2', 'ENST00000537091.2_1_17:17772601-17875627:-|nuORF'] 32567 19061 GGWNFGTS True NCI_RA007_Epitope_Rep5 824.3453170220799 824.34420993586 80.182 2 -1.4496423572756765 0.40198368448852634 1.0 ['ENSG00000085465|ENST00000369732|OVGP1'] 100198 13326 SLLHFLEPSQ True PC9_epitope_Rep2 1169.6080736371698 1169.6069699358602 56.531 2 -1.4496831227507172 0.4019907037889103 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8'] 122240 13024 VGRQLGYW True H1975_Epitope_Rep1 977.5083000262498 977.50720993586 55.18 2 -1.449851849106768 0.4020564104369872 1.0 ['ENST00000487016.1_1_3:4774792-4777134:+|nuORF'] 99219 5365 SLCAAFSV True PC9_epitope_Rep1 796.37892564948 796.37782993586 25.474 2 -1.4498891335763033 0.4020610086736071 1.0 ['ENSG00000149679|ENST00000279101|CABLES2'] 134078 15351 WQQKIAMK True H1975_Epitope_Rep3 1031.5586213469498 1031.5575299358602 64.457 2 -1.4499031376599731 0.4020610086736071 1.0 ['ENSG00000057019|ENST00000326840|DCBLD2', 'nc|ENSG00000057019|Q96PD2-2|DCBLD2', 'ENST00000470393.1_1_3:98526911-98531458:-|nuORF', 'ENST00000494614.5_1_3:98520348-98531278:-|nuORF'] 80290 17792 PLEINRAI True PC9_epitope_Rep3 924.5392658013599 924.53816993586 73.638 2 -1.4499056770966432 0.4020610086736071 1.0 ['nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'nc|ENSG00000116731|Q13029-4|PRDM2', 'ENST00000502724.5_1_1:14065411-14095647:+|nuORF', 'ENST00000491134.5_1_1:14057588-14095647:+|nuORF'] 90048 8622 RGGQGHGE True NCI_RA007_Epitope_Rep5 796.3576130412799 796.35650993586 39.84 2 -1.4499248879813846 0.4020610086736071 1.0 ['ENSG00000115297|ENST00000233638|TLX2'] 124689 10443 VLISRDEL True PC9_epitope_Rep5 943.53384606775 943.53274993586 45.156 2 -1.449964532771105 0.40207504430595165 1.0 ['nc|ENSG00000164393|Q8IZF7-2|ADGRF2P', 'nc|ENSG00000164393|Q8IZF7|ADGRF2P'] 28114 17666 FREIWKNRYVV True PC9_epitope_Rep6 1508.82521747252 1508.8241299358601 80.591 2 -1.4499786767789238 0.40207504430595165 1.0 ['nc|ENSG00000023902|Q53GL0-2|PLEKHO1', 'ENSG00000023902|ENST00000369124|PLEKHO1', 'ENST00000492304.1_1_1:150123092-150125090:+|nuORF', 'PLEKHO1|p.S122Ffs*20|1|0.35|ENSG00000023902|chr1:150156955-150156956|-/T|frameshift_variant'] 32976 3463 GITGMHHH True NCI_RA007_Epitope_Rep4 888.4024550587201 888.40134993586 19.255 2 -1.4500204480507262 0.4020820618750293 1.0 ['ENST00000514736.1_1_4:178824969-178828914:-|nuORF'] 122497 22450 VGSRRGRR True PC9_epitope_Rep1 942.5583785364998 942.55783496793 91.168 1 -1.4500563934170803 0.40211255208027696 1.0 ['ENST00000523094.5_2_5:157285974-157286100:-|nuORF'] 32329 19979 GGAKRGGG True PC9_epitope_Rep4 658.3510711088599 658.35052496793 84.981 1 -1.450149672925594 0.4021406189487026 1.0 ['ENST00000552360.3_1_19:47777847-47777964:+|nuORF'] 29900 8958 FWDQWYLWYLR True H1975_Epitope_Rep1 1674.7983340183398 1674.79722993586 39.36 2 -1.450156226398131 0.4021406189487026 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 13545 16071 DPKKQLVRHRL True H1975_Epitope_Rep1 1388.8364508625598 1388.8353499358602 67.157 2 -1.450166635594945 0.4021406189487026 1.0 ['ENSG00000137770|ENST00000260327|CTDSPL2', 'nc|ENSG00000137770|Q05D32-2|CTDSPL2'] 44055 12657 ILLFSRTAL True PC9_epitope_Rep2 1032.6331661861998 1032.63206993586 53.992 2 -1.4501725034113917 0.4021406189487026 1.0 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2'] 90461 13348 RISSLWVFPYT True H1975_Epitope_Rep1 1367.7237720957498 1367.72266993586 56.45 2 -1.4501909955856989 0.40214763525407815 1.0 ['chr10:5010653-5012353|147|15.84|0.0|20.59|-|1|TE_info:MLT1D,MLT1D_dup12416,ERVL-MaLR,LTR,donor,+,5012353,5012778|AKR1C2,None|4'] 103026 20695 SQKIMIPPL True PC9_epitope_Rep6 1025.5943381493298 1025.59324993586 92.367 2 -1.4504005900639285 0.402213329265001 1.0 ['chr1:155904801-155910450|142|12.94|0.22|5.86|-|0|None,RIT1|1', 'chr1:155904502-155910450|201|12.37|0.6|4.36|-|0|RIT1,RIT1|1'] 81582 24063 PRLCALYA True PC9_epitope_Rep2 905.47930839709 905.47820993586 98.061 2 -1.4504176000107214 0.4022156243765623 1.0 ['ENSG00000167914|ENST00000301659|GSDMA'] 61154 15889 LLDGKNKITQ True PC9_epitope_Rep2 1128.65027280232 1128.64861490379 66.37 3 -1.450477814804328 0.4022156243765623 1.0 ['ENST00000488824.1_1_1:110279695-110282569:-|nuORF', 'ENSG00000134202|ENST00000361066|GSTM3'] 131113 11869 VVNGGVPWP True PC9_epitope_Rep6 923.4865019525099 923.48540993586 56.871 2 -1.4506004635801757 0.40222952358601266 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ATXN2|p.A578Qfs*70|1|0.18|ENSG00000204842|chr12:111516277-111516277|C/-|frameshift_variant', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 32304 16032 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 68.396 2 -1.4506377639376606 0.40222952358601266 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 2008 24634 AEKVEEIVAK True PC9_epitope_Rep4 1114.6233893481397 1114.6222899358602 103.25 2 -1.4506840743323404 0.40222952358601266 1.0 ['nc|ENSG00000130939|O95155-3|UBE4B', 'nc|ENSG00000130939|O95155-2|UBE4B', 'ENSG00000130939|ENST00000343090|UBE4B', 'nc|ENSG00000130939|O95155-4|UBE4B'] 27414 1722 FNEAAAIIRHL True PC9_epitope_Rep1 1253.6880552933699 1253.6863949037902 9.4842 3 -1.4507100633785124 0.40222952358601266 1.0 ['nc|nan|Q9NSK7-2|C19orf12', 'ENSG00000131943|ENST00000323670|C19orf12', 'nc|nan|Q9NSK7-1|C19orf12'] 55055 19235 LALFTHST True NCI_RA007_Epitope_Rep5 888.4705175352 888.46942993586 80.853 2 -1.4507691808728258 0.40222952358601266 1.0 ['ENST00000498793.5_1_1:41503212-41512322:-|nuORF'] 121573 3079 VGKTCLTF True NCI_RA007_Epitope_Rep2 867.4524249429099 867.45132993586 16.59 2 -1.4507720004530797 0.40222952358601266 1.0 ['ENSG00000134594|ENST00000257017|RAB33A'] 132051 10609 VYIEVEDYVP True PC9_epitope_Rep2 1224.59142051352 1224.5897849037901 46.121 3 -1.4507799458842985 0.40222952358601266 1.0 ['PLCB1|p.K796E|1|0.07|ENSG00000182621|chr20:8740421-8740421|A/G|missense_variant'] 58853 10025 LFRWDPGAL True PC9_epitope_Rep4 1073.5658149023698 1073.56470993586 46.223 2 -1.4508241782299232 0.4022365379425259 1.0 ['nc|ENSG00000180264|Q7Z7M1|ADGRD2', 'ENSG00000180264|ENST00000696331|ADGRD2'] 61059 7239 LLATSLEWILC True PC9_epitope_Rep1 1260.67879604928 1260.6771449037901 32.658 3 -1.4508874821687474 0.4022552861937059 1.0 ['ENST00000525790.5_1_1:151742846-151746924:-|nuORF'] 55429 11938 LATNSERL True PC9_epitope_Rep1 902.48214484806 902.48104993586 50.785 2 -1.4509584264888293 0.40226931380831693 1.0 ['SLX4IP|p.T387S|1|0.32|ENSG00000149346|chr20:10623312-10623312|C/G|missense_variant'] 34015 22512 GNKLVMLF True PC9_epitope_Rep1 920.51535955264 920.5142699358599 91.394 2 -1.4509650038654365 0.40226931380831693 1.0 ['nc|ENSG00000136160|P24530-2|EDNRB'] 60279 4186 LIENEEPV True NCI_RA007_Epitope_Rep4 941.4705771048499 941.46948993586 22.406 2 -1.4509733700812604 0.4022716072560017 1.0 ['ENSG00000166135|ENST00000299163|HIF1AN'] 134247 22181 WRRRQRQRGL True NCI_RA007_Epitope_Rep2 1410.8181154598199 1410.8164649037901 92.086 3 -1.4509791717629554 0.4022716072560017 1.0 ['ENST00000370272.8_1_1:93811500-93811869:+|nuORF'] 134011 22607 WPTKIIYLYI True PC9_epitope_Rep5 1308.74819593844 1308.74708993586 91.955 2 -1.4511882486457715 0.4023136850009386 1.0 ['ENSG00000143797|ENST00000305997|MBOAT2', 'ENST00000486484.5_1_2:9002434-9143743:-|nuORF'] 112343 20469 TMRPYIQEQ True NCI_RA007_Epitope_Rep5 1164.5597435457598 1164.55810490379 85.677 3 -1.4512604597394354 0.4023136850009386 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 82827 9541 PVSRFFEVRND True PC9_epitope_Rep3 1364.6836981889198 1364.68260993586 41.647 2 -1.4513031801563603 0.4023136850009386 1.0 ['ENST00000582056.5_1_17:7123303-7124179:+|nuORF', 'ENST00000582356.5_1_17:7123904-7124179:+|nuORF'] 111550 6374 TLMAPRVAA True PC9_epitope_Rep2 928.5164221817998 928.51532993586 29.921 2 -1.4513041838855423 0.4023136850009386 1.0 ['ENST00000531934.5_1_2:71297680-71299860:+|nuORF', 'ENST00000428360.2_1_2:71297680-71299860:+|nuORF'] 84346 17097 QFVEPSRQF True PC9_epitope_Rep6 1136.5614577979197 1136.56036993586 78.337 2 -1.4513401936395596 0.4023136850009386 1.0 ['ENST00000460484.5_1_7:54823470-54826890:-|nuORF', 'ENSG00000132432|ENST00000352861|SEC61G'] 138166 23057 YQNLAAGI True PC9_epitope_Rep6 848.4392174069199 848.4386649679301 101.79 1 -1.4513631886623541 0.4023136850009386 1.0 ['nc|ENSG00000138068|Q6IMI4-2|SULT6B1'] 71095 5450 METDLEVRLR True H1975_Epitope_Rep2 1260.6496211793199 1260.64852993586 25.99 2 -1.4514555793557875 0.40232959144174263 1.0 ['ENST00000512687.5_1_5:68530748-68551520:+|nuORF'] 2539 7370 AEQYQFLHHTL True NCI_RA007_Epitope_Rep1 1385.6727991520497 1385.67170993586 32.662 2 -1.4514719161636802 0.40232959144174263 1.0 ['nc|ENSG00000143851|P35236-3|PTPN7', 'ENSG00000143851|ENST00000691036|PTPN7', 'nc|ENSG00000143851|P35236-2|PTPN7'] 36926 17941 GVRAVRSGWW True PC9_epitope_Rep5 1172.6203100867199 1172.6186549037902 74.027 3 -1.4515047473822127 0.40232959144174263 1.0 ['ENSG00000169894|ENST00000379458|MUC3A'] 70964 15476 MEPCGHCL True PC9_epitope_Rep3 888.3292156590799 888.32810993586 64.68 2 -1.4515084824020568 0.40232959144174263 1.0 ['ENSG00000132906|ENST00000333868|CASP9', 'nc|ENSG00000132906|P55211-4|CASP9'] 56326 6202 LDREQTDRYEF True H1975_Epitope_Rep3 1470.6739213508597 1470.6728299358601 28.869 2 -1.4515605452820717 0.40232959144174263 1.0 ['ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7'] 82245 12951 PTKSFISTWWK True NCI_RA007_Epitope_Rep2 1379.7237720957498 1379.72266993586 54.998 2 -1.4515796999954695 0.40232959144174263 1.0 ['nc|ENSG00000105976|P08581-2|MET'] 4888 6830 ALGGEPPPG True PC9_epitope_Rep5 793.3970182417698 793.39592993586 31.244 2 -1.4516736250442008 0.40232959144174263 1.0 ['ENST00000455784.6_1_22:19710257-19710719:+|nuORF'] 78024 6632 PALPARAPA True PC9_epitope_Rep3 862.50248636982 862.50138993586 30.533 2 -1.4516873291407428 0.40232959144174263 1.0 ['ENST00000504806.5_1_5:10564479-10564683:+|nuORF'] 34001 20887 GNIIALYVF True PC9_epitope_Rep6 1008.5644179200399 1008.56332993586 93.115 2 -1.4516902421957711 0.40232959144174263 1.0 ['ENSG00000171659|ENST00000378142|GPR34'] 49145 23295 KGKKKRTRKK True NCI_RA007_Epitope_Rep4 1256.85170700388 1256.8506099358601 101.16 2 -1.4518096025498846 0.40232959144174263 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C'] 562 6393 AARALVNL True PC9_epitope_Rep6 826.50248636982 826.5019349679301 33.192 1 -1.4518137559577922 0.40232959144174263 1.0 ['ENST00000530074.1_1_8:145192726-145193642:+|nuORF', 'ENSG00000235173|ENST00000347708|HGH1'] 122570 5433 VGTERWWL True PC9_epitope_Rep3 1045.53451477409 1045.5334099358602 25.969 2 -1.4518137830427922 0.40232959144174263 1.0 ['ENSG00000204007|ENST00000371763|GLT6D1', 'GLT6D1|p.N175Tfs*56|1|0.4|ENSG00000204007|chr9:135624406-135624406|G/-|frameshift_variant'] 71154 19670 MEVEQYRRERE True H1975_Epitope_Rep1 1523.7150749701898 1523.7139699358602 81.875 2 -1.4518259250953252 0.40232959144174263 1.0 ['ENST00000481998.1_1_6:31513879-31514336:-|nuORF', 'nc|ENSG00000213760|O95670-3|ATP6V1G2', 'ENSG00000213760|ENST00000303892|ATP6V1G2', 'ENST00000475917.1_1_6:31510065-31514336:-|nuORF'] 121610 12274 VGLDLERR True H1975_Epitope_Rep3 956.54032843052 956.53922993586 52.39 2 -1.4518662311284825 0.40232959144174263 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33', 'nc|ENSG00000167612|Q7Z3H0-1|ANKRD33'] 30511 7360 GAHLTVVIV True PC9_epitope_Rep2 907.5491022090699 907.54800993586 33.692 2 -1.4519194717256954 0.40232959144174263 1.0 ['OR8K3|p.K262Rfs*7|1|0.17|ENSG00000280314|chr11:56319090-56319091|-/G|frameshift_variant', 'ENSG00000280314|ENST00000641662|OR8K3'] 115689 5399 TVLEDLESELD True NCI_RA007_Epitope_Rep5 1261.59254271233 1261.59144993586 27.456 2 -1.4519503366218134 0.40232959144174263 1.0 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 29542 26685 FVIFMFFLN True PC9_epitope_Rep1 1176.6041745570399 1176.60253490379 108.47 3 -1.452003234269179 0.40232959144174263 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 138627 16290 YRRGRRQLQLL True NCI_RA007_Epitope_Rep4 1457.8691479731697 1457.8675049037902 70.646 3 -1.4521414739978051 0.40232959144174263 1.0 ['ENSG00000205138|ENST00000378887|SDHAF1'] 86472 22976 QQTVRKAI True PC9_epitope_Rep5 942.5610638750998 942.55996993586 93.367 2 -1.4521430346379316 0.40232959144174263 1.0 ['ENSG00000128833|ENST00000261839|MYO5C'] 78282 19295 PARVLDWWG True PC9_epitope_Rep6 1098.5610638750998 1098.5599699358602 86.865 2 -1.4522348382193524 0.40233160925606654 1.0 ['ENST00000337304.2_1_22:39916672-39916864:+|nuORF'] 61607 12673 LLGRSPYEF True H1975_Epitope_Rep1 1080.56039516876 1080.55928993586 53.8 2 -1.4523648645306846 0.40233160925606654 1.0 ['EPAS1|p.A277P|2|0.23|ENSG00000116016|chr2:46369876-46369876|G/C|missense_variant'] 80118 19855 PKGVSRKLDRL True H1975_Epitope_Rep3 1267.77245362367 1267.7707949037901 83.126 3 -1.4523980700093717 0.40233160925606654 1.0 ['ENST00000480306.5_1_3:52027767-52028806:-|nuORF', 'ENSG00000162244|ENST00000294189|RPL29'] 110542 8552 TIRLFQQQK True NCI_RA007_Epitope_Rep2 1160.6665915728001 1160.66548993586 37.908 2 -1.452421226626469 0.40233160925606654 1.0 ['ENSG00000122641|ENST00000242208|INHBA', 'INHBA|p.G273Afs*86|1|0.09|ENSG00000122641|chr7:41690113-41690113|C/-|frameshift_variant', 'ENST00000464515.1_1_7:41729250-41730808:-|nuORF'] 15506 9954 EAQRQLEQERR True NCI_RA007_Epitope_Rep1 1441.7385872960897 1441.7374899358601 42.723 2 -1.4524493367402895 0.40233160925606654 1.0 ['nc|ENSG00000136279|Q9UJU6-6|DBNL', 'ENSG00000136279|ENST00000448521|DBNL', 'nc|ENSG00000136279|Q9UJU6-2|DBNL', 'nc|ENSG00000136279|Q9UJU6-3|DBNL', 'ENST00000449997.1_1_7:44097442-44098349:+|nuORF', 'nc|ENSG00000136279|Q9UJU6-5|DBNL', 'nc|ENSG00000136279|Q9UJU6-4|DBNL'] 63696 9690 LPQDTFIQF True PC9_epitope_Rep5 1107.5600608155898 1107.5589699358602 42.24 2 -1.4524706738960014 0.40233160925606654 1.0 ['nc|ENSG00000170266|P16278-3|GLB1', 'nc|ENSG00000170266|P16278|GLB1', 'ENSG00000170266|ENST00000307363|GLB1', 'nc|ENSG00000170266|P16278-2|GLB1'] 92417 25110 RQRVRKKRS True PC9_epitope_Rep1 1212.7639546286398 1212.76231490379 101.47 3 -1.4524928153831154 0.40233160925606654 1.0 ['ENST00000553968.1_1_14:80678377-80678506:-|nuORF'] 60727 25958 LKAKKPQKRKP True PC9_epitope_Rep3 1320.8717737421198 1320.8701349037901 105.65 3 -1.4524928985751537 0.40233160925606654 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 18103 17711 EILEPPKKRT True H1975_Epitope_Rep1 1209.70812203161 1209.70648490379 73.717 3 -1.4525167031676316 0.40233160925606654 1.0 ['ENST00000572240.5_1_16:3078109-3079857:-|nuORF', 'nc|ENSG00000162069|A1A5D9-2|BICDL2', 'ENSG00000162069|ENST00000572449|BICDL2'] 105217 24453 STQKKVIKKKT True H1975_Epitope_Rep2 1287.8238204901895 1287.82216490379 100.6 3 -1.4525392223117397 0.40233160925606654 1.0 ['ENSG00000186472|ENST00000333891|PCLO'] 20356 9179 EPGVEPQDSRR True NCI_RA007_Epitope_Rep3 1268.61092717148 1268.60929490379 43.194 3 -1.4527057266442633 0.40233160925606654 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B'] 71274 14847 MGVNMETARF True H1975_Epitope_Rep2 1154.52124986206 1154.5206749679298 62.264 1 -1.452726251701827 0.40233160925606654 1.0 ['ENSG00000116039|ENST00000234396|ATP6V1B1', 'ATP6V1B1|p.F238V|1|0.31|ENSG00000116039|chr2:70961620-70961620|T/G|missense_variant', 'ENST00000523482.5_1_8:20054917-20070443:+|nuORF', 'ENSG00000147416|ENST00000276390|ATP6V1B2'] 79592 12144 PGVHGQPG True NCI_RA007_Epitope_Rep2 747.3663868198299 747.36583496793 51.832 1 -1.452812981069204 0.4023690846185422 1.0 ['ENST00000546361.6_1_19:16628883-16629183:-|nuORF'] 72201 17984 MRSEEEEAEEA True NCI_RA007_Epitope_Rep5 1308.5139751218 1308.5123249037902 75.962 3 -1.452831988045024 0.4023690846185422 1.0 ['ENSG00000157856|ENST00000288710|DRC1'] 112239 10717 TLYEELHIHS True H1975_Epitope_Rep1 1240.60880191316 1240.6077099358602 46.184 2 -1.452906325541747 0.4023995496446415 1.0 ['ENSG00000076864|ENST00000374765|RAP1GAP', 'nc|ENSG00000076864|P47736-2|RAP1GAP', 'nc|ENSG00000076864|P47736-3|RAP1GAP', 'nc|ENSG00000076864|P47736-4|RAP1GAP'] 58644 22987 LFGLGVRKW True PC9_epitope_Rep2 1074.6338348925399 1074.6327299358602 93.913 2 -1.452927451105884 0.40240183890791387 1.0 ['ENSG00000153283|ENST00000352690|CD96', 'nc|ENSG00000153283|P40200|CD96', 'PHLDB2-CD96|1|fusion', 'PHLDB2-CD96|2|fusion'] 34078 19936 GNTLTSLK True PC9_epitope_Rep6 832.46543215476 832.46432993586 89.342 2 -1.4529783508810499 0.40240183890791387 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 30552 16284 GAIVIERPNV True PC9_epitope_Rep4 1066.61349337078 1066.6123899358602 70.593 2 -1.4530106727719478 0.40240412806379733 1.0 ['ENST00000591475.5_1_18:61064221-61089576:-|nuORF', 'ENSG00000119541|ENST00000238497|VPS4B', 'ENST00000588059.5_1_18:61064418-61077532:-|nuORF', 'ENST00000589604.5_1_18:61064221-61077532:-|nuORF'] 92595 3889 RRDWDCFWKRK True NCI_RA007_Epitope_Rep4 1594.7939344275794 1594.7922749037898 21.175 3 -1.4530402386402061 0.40240412806379733 1.0 ['nc|ENSG00000151418|Q96LB4-3|ATP6V1G3'] 81074 14414 PPEPREKTI True PC9_epitope_Rep4 1065.58185888933 1065.5807699358602 63.352 2 -1.453222440940802 0.40244860624113143 1.0 ['nc|ENSG00000067177|P46020-3|PHKA1', 'nc|ENSG00000067177|P46020-2|PHKA1', 'ENSG00000067177|ENST00000373542|PHKA1'] 90397 15801 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 65.964 3 -1.453245519098177 0.40244860624113143 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 31417 17764 GEDGQYFL True PC9_epitope_Rep5 927.3974121645899 927.39630993586 73.347 2 -1.4532739824524654 0.40244860624113143 1.0 ['nc|ENSG00000139910|P51513-5|NOVA1', 'ENSG00000139910|ENST00000539517|NOVA1', 'nc|ENSG00000139910|P51513-2|NOVA1'] 10571 6666 CRAVAGVI True NCI_RA007_Epitope_Rep4 787.4374435851099 787.43634993586 32.263 2 -1.4534731402086645 0.4025235409313179 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3|MACF1'] 124369 12721 VLDVQRYPL True PC9_epitope_Rep1 1101.61824439805 1101.6171499358602 53.804 2 -1.4535465230677234 0.4025235409313179 1.0 ['ENSG00000086062|ENST00000379731|B4GALT1', 'nc|ENSG00000086062|P15291-2|B4GALT1'] 39155 19282 HLELGWHK True PC9_epitope_Rep6 1018.5348491272599 1018.53374993586 86.815 2 -1.4535515928253102 0.4025235409313179 1.0 ['ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-4|SPTBN4', 'nc|ENSG00000160460|Q9H254-2|SPTBN4'] 22073 7419 ESSKVFKY True H1975_Epitope_Rep3 986.5072969667399 986.50618993586 33.515 2 -1.4535661664144297 0.4025235409313179 1.0 ['ENSG00000186230|ENST00000334181|ZNF749'] 29517 25818 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 109.37 3 -1.4536952181092622 0.4025422735054762 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 99638 15525 SLFSRHPVL True PC9_epitope_Rep5 1054.59236400338 1054.59126993586 64.726 2 -1.4539072999874592 0.4025844580729136 1.0 ['nc|ENSG00000132382|Q9BQG0-2|MYBBP1A', 'ENSG00000132382|ENST00000254718|MYBBP1A', 'ENST00000574547.5_1_17:4442712-4447986:-|nuORF'] 130054 19277 VTQDFMMYRTG True PC9_epitope_Rep2 1347.5951430783098 1347.59404993586 79.522 2 -1.454021017493723 0.40259831625354686 1.0 ['ENST00000527715.5_1_15:79214474-79217794:-|nuORF', 'ENST00000533777.5_1_15:79214474-79223953:-|nuORF', 'ENST00000534237.5_1_15:79214474-79224366:-|nuORF', 'ENSG00000103811|ENST00000220166|CTSH'] 62597 21318 LLVETRKLLL True PC9_epitope_Rep4 1196.7856440763198 1196.78454993586 90.166 2 -1.4541172229655985 0.40259831625354686 1.0 ['ENST00000446176.6_1_9:132651045-132651225:-|nuORF'] 67714 5990 LTGHLCAP True PC9_epitope_Rep1 810.40580910366 810.40470993586 27.856 2 -1.4542439093903252 0.40259831625354686 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 81357 23566 PPRRKSRRRIF True H1975_Epitope_Rep3 1467.9011168077898 1467.90000993586 98.322 2 -1.4542460000816066 0.40259831625354686 1.0 ['nc|ENSG00000152270|Q13370-2|PDE3B', 'ENSG00000152270|ENST00000282096|PDE3B'] 44558 9109 IPDFLGRCQSD True NCI_RA007_Epitope_Rep1 1249.57612188589 1249.5750299358601 39.434 2 -1.4542491493208591 0.40259831625354686 1.0 ['ENST00000500085.2_1_4:187509748-187518366:-|nuORF'] 36037 3476 GVDRYAVSIMW True NCI_RA007_Epitope_Rep5 1295.6332428391897 1295.63158490379 19.161 3 -1.4542871399130386 0.40259831625354686 1.0 ['ENSG00000166938|ENST00000319212|DIS3L', 'DIS3L|p.K695Rfs*37|1|0.32|ENSG00000166938|chr15:66326243-66326243|A/-|frameshift_variant', 'nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 83786 8540 QEEKDKLLK True H1975_Epitope_Rep3 1129.6342883850098 1129.6331899358602 37.837 2 -1.454302433356668 0.40259831625354686 1.0 ['ENST00000489323.5_1_14:74495895-74513566:+|nuORF'] 68728 5470 LVDFPPSLY True H1975_Epitope_Rep1 1049.54334812229 1049.5422499358601 26.101 2 -1.4544147444246396 0.4026404962069249 1.0 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|210|1|anti-sense', 'chr2:113477199-113482177|379|28.75|0.21|7.07|+|2|TE_info:L1PA3,L1PA3_dup1127,L1,LINE,donor,-,113471482,113477199|None,ZNG1B|61'] 92206 18431 RQHLLPAP True PC9_epitope_Rep2 930.5399345076999 930.53882993586 76.226 2 -1.4544843696270482 0.4026475002344996 1.0 ['ENST00000480594.1_1_2:65243695-65245227:+|nuORF'] 42629 22926 IETLSGKKR True PC9_epitope_Rep1 1030.61349337078 1030.6123899358602 92.985 2 -1.454543740103916 0.4026637902734137 1.0 ['chr10:5004014-5005970|265|142.77|0.0|23.77|-|2|TE_info:L1M4c,L1M4c_dup2264,L1,LINE,donor,+,5005970,5006355|AKR1C2,None|5'] 58633 13521 LFGAKAGG True H1975_Epitope_Rep1 719.3966243189499 719.3960749679301 57.129 1 -1.4545930545195214 0.4026637902734137 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3'] 47097 12591 IVVPSVRTP True PC9_epitope_Rep5 966.58621599378 966.58510993586 53.431 2 -1.454604228741613 0.4026637902734137 1.0 ['ENST00000373517.3_1_X:72434272-72434665:-|nuORF'] 72930 5922 NCGPPPTLSFA True NCI_RA007_Epitope_Rep2 1102.51173072418 1102.5106299358602 27.648 2 -1.4546271205211736 0.4026637902734137 1.0 ['ENSG00000123838|ENST00000367070|C4BPA'] 101673 16857 SPFSKTSI True PC9_epitope_Rep5 865.45453311789 865.4539849679301 69.851 1 -1.4546718698101369 0.40268251790885534 1.0 ['nc|ENSG00000107485|P23771|GATA3', 'ENSG00000107485|ENST00000379328|GATA3'] 41268 5687 IAFSLQCLYY True PC9_epitope_Rep4 1219.59473207215 1219.59362993586 28.689 2 -1.4547994614780928 0.40270124510516564 1.0 ['ENSG00000138073|ENST00000260643|PREB'] 91788 19257 RPLEVSVAP True PC9_epitope_Rep5 966.5498304850599 966.54872993586 79.113 2 -1.4548626354032008 0.40271753147787753 1.0 ['ENST00000374280.3_1_1:26362527-26362713:+|nuORF'] 41780 7292 IDRAAGGK True NCI_RA007_Epitope_Rep1 786.4348007328199 786.43370993586 32.354 2 -1.4549398754204064 0.40271753147787753 1.0 ['ENST00000424768.1_1_7:105926115-105926304:-|nuORF'] 126177 14886 VPGAQYQV True PC9_epitope_Rep2 860.43921740692 860.4386649679301 62.524 1 -1.4549535795386759 0.40271753147787753 1.0 ['nc|ENSG00000151490|Q16827-5|PTPRO', 'nc|ENSG00000151490|Q16827-2|PTPRO', 'ENSG00000151490|ENST00000281171|PTPRO'] 109067 20592 TFDPPGGV True PC9_epitope_Rep6 788.3704691407598 788.36936993586 91.936 2 -1.4550499466575326 0.40271753147787753 1.0 ['ENSG00000168334|ENST00000340369|XIRP1'] 22416 5502 ETFFSHLGI True PC9_epitope_Rep4 1049.5181960036098 1049.5170899358602 27.922 2 -1.45506769767988 0.4027245336991055 1.0 ['ENSG00000174206|ENST00000398055|KICS2', 'ENST00000540673.1_1_12:64615457-64616017:-|nuORF'] 82933 20512 PWLFIPLP True PC9_epitope_Rep6 981.5687750244899 981.56766993586 91.629 2 -1.4551178859022134 0.4027315357561547 1.0 ['ENST00000479872.5_1_1:165879160-165879211:+|nuORF'] 76598 17322 NTEVRSFGPLT True PC9_epitope_Rep3 1219.6197009500297 1219.6186099358601 71.803 2 -1.4551370726554855 0.40273853764903106 1.0 ['ENSG00000154928|ENST00000398015|EPHB1'] 22749 22795 EVANRVSKV True PC9_epitope_Rep1 1000.5665431783599 1000.56544993586 92.492 2 -1.4551694129128936 0.4027408180251574 1.0 ['ENSG00000183098|ENST00000377047|GPC6'] 33023 16970 GIYRDEYQRTW True H1975_Epitope_Rep3 1485.7000765290497 1485.69896993586 70.865 2 -1.4552456092210249 0.4027408180251574 1.0 ['ENSG00000214827|ENST00000369476|MTCP1'] 64764 24436 LRRTKRGGV True PC9_epitope_Rep5 1041.65194456817 1041.6508499358602 99.034 2 -1.455271190874565 0.4027478195629748 1.0 ['ENST00000597244.1_1_19:16688850-16689066:-|nuORF'] 6475 12694 APTERATLP True PC9_epitope_Rep1 954.5134449763399 954.51234993586 53.699 2 -1.455386018519001 0.4027593806046255 1.0 ['ENST00000528856.5_1_11:34073295-34118749:+|nuORF', 'ENST00000526477.5_1_11:34073295-34074390:+|nuORF'] 122569 8888 VGTEQTDRRWR True H1975_Epitope_Rep1 1402.70655889182 1402.70546993586 39.101 2 -1.4553932717577387 0.4027593806046255 1.0 ['ENSG00000275793|ENST00000619918|RIMBP3', 'ENSG00000274600|ENST00000620804|RIMBP3B', 'ENSG00000183246|ENST00000433039|RIMBP3C'] 138498 22834 YRIGKVTS True PC9_epitope_Rep4 922.52361573722 922.52250993586 96.054 2 -1.4554961525143995 0.4027593806046255 1.0 ['ENST00000563711.5_1_16:21973998-21987565:+|nuORF', 'ENSG00000140740|ENST00000268379|UQCRC2'] 121109 7582 VGGDKPTF True PC9_epitope_Rep5 819.41266830591 819.41156993586 34.112 2 -1.455523897620091 0.4027593806046255 1.0 ['ENSG00000132003|ENST00000590508|ZSWIM4'] 59502 23681 LGPLGASPGLM True PC9_epitope_Rep5 1011.54230257647 1011.5417749679301 96.067 1 -1.4555971150836275 0.4027593806046255 1.0 ['ENST00000532085.1_1_11:118900045-118900432:-|nuORF', 'ENST00000357590.9_2_11:118900045-118901265:-|nuORF', 'ENST00000330775.9_2_11:118900045-118901566:-|nuORF', 'ENST00000534384.1_1_11:118900045-118900639:-|nuORF', 'ENST00000525102.5_1_11:118900045-118901045:-|nuORF', 'ENST00000538950.5_1_11:118899072-118901566:-|nuORF'] 91805 18099 RPLPRTARTL True NCI_RA007_Epitope_Rep3 1179.72002412799 1179.7189299358602 79.312 2 -1.4556418427046522 0.402761660278276 1.0 ['ENST00000495916.1_1_7:97361495-97362128:+|nuORF'] 65336 18841 LSELLSFPSPL True PC9_epitope_Rep2 1201.6594405036901 1201.65834993586 77.841 2 -1.4556442369791969 0.402761660278276 1.0 ['ENST00000511638.5_1_5:137515050-137515239:+|nuORF'] 61184 12554 LLDLPTVVP True NCI_RA007_Epitope_Rep2 965.57973363101 965.57862993586 53.447 2 -1.455702729554545 0.40276605719643693 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 91281 15336 RLWWYHWICWL True NCI_RA007_Epitope_Rep2 1660.81254461384 1660.81144993586 64.35 2 -1.4557537370757185 0.40276605719643693 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 125753 9448 VNGLQPLPA True H1975_Epitope_Rep1 907.5127167003499 907.51160993586 41.257 2 -1.4557677416740802 0.40276605719643693 1.0 ['ENST00000373148.5_1_1:36643158-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-3|MAP7D1', 'ENST00000487114.1_1_1:36644989-36645856:+|nuORF', 'nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 21185 7766 ERERFESDRDR True H1975_Epitope_Rep1 1493.6971164069298 1493.69600993586 34.83 2 -1.455785488398561 0.40276605719643693 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 122912 12460 VGVSSGKLL True PC9_epitope_Rep2 858.51746772762 858.51636993586 53.236 2 -1.4558242502488288 0.40276605719643693 1.0 ['ENSG00000156709|ENST00000287295|AIFM1', 'nc|ENSG00000156709|O95831-3|AIFM1', 'nc|ENSG00000156709|O95831-5|AIFM1', 'nc|ENSG00000156709|O95831-2|AIFM1'] 62192 14158 LLPNPDPFL True PC9_epitope_Rep4 1024.5593325395998 1024.55822993586 62.362 2 -1.4559070234912035 0.40276605719643693 1.0 ['ENST00000468737.1_1_3:50329212-50329380:-|nuORF'] 62798 23443 LMFAPLHP True NCI_RA007_Epitope_Rep3 924.4891448047999 924.48804993586 101.76 2 -1.4559244158881748 0.40276605719643693 1.0 ['ENST00000432854.5_1_7:44103291-44103480:+|nuORF'] 125131 24369 VLPPHLGG True NCI_RA007_Epitope_Rep2 788.45447354824 788.4539249679301 102.35 1 -1.4559662585313589 0.40276605719643693 1.0 ['ENST00000334370.8_1_19:42875618-42879777:+|nuORF'] 56280 7565 LDQLQTQTKFT True H1975_Epitope_Rep1 1321.6877805098497 1321.6866899358602 34.089 2 -1.456007499948266 0.40276605719643693 1.0 ['KCNIP3|p.A84T|1|0.12|ENSG00000115041|chr2:95374364-95374364|G/A|missense_variant'] 42812 20848 IFIVAGLAALV True PC9_epitope_Rep5 1085.68486740589 1085.68376993586 85.241 2 -1.4560581225672184 0.40277305704340083 1.0 ['nc|ENSG00000181885|O95471-2|CLDN7', 'ENSG00000181885|ENST00000360325|CLDN7'] 10479 806 CNFTRSFYKH True NCI_RA007_Epitope_Rep1 1301.59752603681 1301.59588490379 4.2652 3 -1.4561785501873419 0.40281277468502785 1.0 ['HUWE1|p.Y4127N|1|0.25|ENSG00000086758|chrX:53536426-53536426|A/T|missense_variant'] 85247 23345 QKLKPQTHQK True PC9_epitope_Rep4 1234.71460439438 1234.71295490379 98.054 3 -1.4562463725814352 0.40281277468502785 1.0 ['ENST00000282030.5_1_18:42644666-42644876:+|nuORF'] 74341 9901 NIPRMIYC True PC9_epitope_Rep5 1008.4884931817999 1008.48738993586 43.054 2 -1.4562500891359642 0.40281277468502785 1.0 ['ENSG00000145703|ENST00000274364|IQGAP2'] 108992 15077 TEVLAALL True NCI_RA007_Epitope_Rep5 828.4956696538799 828.49456993586 64.661 2 -1.4562587089861996 0.40281277468502785 1.0 ['ENSG00000273540|ENST00000614907|AGBL1', 'nc|ENSG00000273540|Q96MI9|AGBL1', 'AGBL1|p.A233Qfs*32|1|0.36|ENSG00000273540|chr15:86247840-86247840|G/-|frameshift_variant'] 16809 23741 EFLLAALCVS True PC9_epitope_Rep4 1064.55761828744 1064.55652993586 99.696 2 -1.4563512708502213 0.40281977357429155 1.0 ['ENST00000215832.10_1_22:22118263-22123490:-|nuORF'] 69814 18276 LWVSEWGHWNR True PC9_epitope_Rep3 1468.7000169593998 1468.69890993586 75.505 2 -1.4564917900265413 0.40287365077876874 1.0 ['ENST00000394893.5_1_7:75615553-75615796:+|nuORF'] 73315 14224 NELDRYHRIIE True PC9_epitope_Rep6 1456.7422756941999 1456.7411699358602 66.6 2 -1.4565234540754581 0.4028806487905494 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 26974 20409 FLKLLKFV True PC9_epitope_Rep4 1006.65792438206 1006.65682993586 86.65 2 -1.456616953483806 0.4028946443220438 1.0 ['ENST00000357033.8_1_X:33229490-33229556:-|nuORF'] 46117 22101 ITAEHISIW True PC9_epitope_Rep4 1068.56039516876 1068.55928993586 93.228 2 -1.4566307544004335 0.4028946443220438 1.0 ['ENST00000523206.5_1_8:95850795-95884149:+|nuORF', 'nc|ENSG00000164941|Q75QN2-2|INTS8', 'ENSG00000164941|ENST00000523731|INTS8'] 41278 12476 IAGIQNEKET True PC9_epitope_Rep5 1101.56660274801 1101.56550993586 52.987 2 -1.4567005200727132 0.40289919610003044 1.0 ['ENST00000402024.2_1_6:116779363-116779789:-|nuORF'] 35337 6356 GSWFYIQPFYK True H1975_Epitope_Rep1 1434.6972229947398 1434.69556490379 29.508 3 -1.4567256926418308 0.40289919610003044 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENST00000467056.5_1_3:4536161-4687445:+|nuORF'] 29501 25448 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 105.31 3 -1.4567486717143292 0.40289919610003044 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 92257 21521 RQKSIGAA True NCI_RA007_Epitope_Rep5 829.4769998979698 829.47590993586 89.863 2 -1.456823154879262 0.40289919610003044 1.0 ['SHANK1|p.L1994Sfs*41|1|0.5|ENSG00000161681|chr19:50662472-50662473|-/G|frameshift_variant', 'nc|ENSG00000161681|Q9Y566-3|SHANK1', 'ENSG00000161681|ENST00000293441|SHANK1', 'nc|ENSG00000161681|Q9Y566-2|SHANK1'] 23571 6314 EYDDQRALEIH True NCI_RA007_Epitope_Rep2 1387.6368075661499 1387.6357099358602 29.165 2 -1.4569304265298615 0.40291791175953595 1.0 ['MB21D2-FGF12|1|fusion', 'ENSG00000180611|ENST00000392452|MB21D2'] 42630 22809 IETLSGKKR True PC9_epitope_Rep3 1030.61349337078 1030.6123899358602 93.005 2 -1.4571180183009877 0.402938901778809 1.0 ['chr10:5004014-5005970|265|142.77|0.0|23.77|-|2|TE_info:L1M4c,L1M4c_dup2264,L1,LINE,donor,+,5005970,5006355|AKR1C2,None|5'] 15741 16504 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 70.241 2 -1.4571343312403764 0.402938901778809 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 34248 23369 GPKKTKRE True PC9_epitope_Rep3 942.5610638750999 942.55996993586 95.169 2 -1.457215744227132 0.402938901778809 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 119427 5113 VEPHSPSPSSK True H1975_Epitope_Rep3 1150.56185172074 1150.56074993586 24.778 2 -1.4574012316775817 0.402981052039513 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 400 17395 AALIVLTE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 73.69 2 -1.4574338538817957 0.40299976564330914 1.0 ['nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF', 'chr15:72202620-72203022|122|30.08|0.97|4.96|-|1|PKM,PKM|1'] 16341 16498 EEKKRKREREH True NCI_RA007_Epitope_Rep2 1523.8280710068298 1523.82696993586 68.901 2 -1.457457242803355 0.4030137564153641 1.0 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000487688.1_1_5:889867-892539:-|nuORF', 'ENST00000466684.5_1_5:889867-892639:-|nuORF', 'ENST00000495265.5_1_5:889867-892820:-|nuORF', 'ENST00000483173.5_3_5:889166-892639:-|nuORF'] 21994 13734 ESNLVYWLWEK True NCI_RA007_Epitope_Rep1 1465.7241660185698 1465.7230699358602 57.437 2 -1.4574838152208938 0.4030137564153641 1.0 ['ENSG00000243710|ENST00000372492|CFAP57', 'nc|ENSG00000243710|Q96MR6-2|CFAP57'] 90150 13613 RHCLVNMETS True NCI_RA007_Epitope_Rep5 1188.53796255536 1188.53632490379 59.049 3 -1.4578261252881308 0.40306289838770154 1.0 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 129532 23577 VTFVLQLFLFL True PC9_epitope_Rep4 1338.79514613086 1338.79351490379 98.995 3 -1.457860743125572 0.40306289838770154 1.0 ['ENSG00000177108|ENST00000319374|ZDHHC22'] 65492 10154 LSFNYLLFFFY True H1975_Epitope_Rep1 1472.7380251775598 1472.7369299358602 43.996 2 -1.457923664551718 0.40306989278809535 1.0 ['ENST00000306442.4_1_5:122359405-122359573:-|nuORF'] 94372 12029 RYDDYRDYDS True PC9_epitope_Rep5 1366.54257282814 1366.54146993586 51.264 2 -1.4579811045684081 0.4030908750058584 1.0 ['ENSG00000003756|ENST00000347869|RBM5', 'ENST00000433556.6_1_3:50127867-50137485:+|nuORF', 'nc|ENSG00000003756|P52756-3|RBM5', 'nc|ENSG00000003756|P52756-4|RBM5', 'nc|ENSG00000003756|P52756-2|RBM5', 'ENST00000492472.1_1_3:50127867-50131398:+|nuORF', 'nc|ENSG00000003756|P52756-5|RBM5', 'ENST00000464087.6_1_3:50127867-50138068:+|nuORF'] 108129 6124 TDPRCKEMRQL True H1975_Epitope_Rep1 1375.6700393540698 1375.6689499358602 28.626 2 -1.4579946857610464 0.4030908750058584 1.0 ['ENST00000367959.6_1_1:161676930-161676990:+|nuORF'] 99563 21495 SLFFAVLVK True PC9_epitope_Rep1 1022.6164534928998 1022.6153499358601 87.524 2 -1.4579999561718346 0.4030908750058584 1.0 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000433430.5_1_2:233196570-233200992:+|nuORF', 'ENST00000429283.2_1_2:233194466-233199371:+|nuORF', 'ENST00000445090.5_1_2:233194598-233200857:+|nuORF', 'AGAP1-DIS3L2|1|fusion'] 70621 7303 MAGNKGRG True NCI_RA007_Epitope_Rep2 789.39155602185 789.39044993586 33.027 2 -1.4580932163376186 0.4031118557486145 1.0 ['ENSG00000113356|ENST00000651687|POLR3G'] 75619 12745 NQSDQLPGWSP True H1975_Epitope_Rep3 1227.5520153130299 1227.5514749679298 54.237 1 -1.4581985259563948 0.4031118557486145 1.0 ['ENST00000448516.6_1_16:31142309-31142426:+|nuORF'] 10478 308 CNFTRSFYKH True NCI_RA007_Epitope_Rep1 1301.59752603681 1301.59588490379 1.6431 3 -1.4582042524893457 0.4031118557486145 1.0 ['HUWE1|p.Y4127N|1|0.25|ENSG00000086758|chrX:53536426-53536426|A/T|missense_variant'] 82378 14407 PTVPLKDVVEQ True H1975_Epitope_Rep3 1223.6761531969898 1223.6750499358602 60.771 2 -1.4583204754587789 0.40314927419071384 1.0 ['nc|ENSG00000109654|Q9C040|TRIM2', 'ENSG00000109654|ENST00000338700|TRIM2'] 108179 8740 TDVEVDWLCL True PC9_epitope_Rep1 1191.5481758025498 1191.54652490379 38.457 3 -1.4583324641854156 0.40314927419071384 1.0 ['SPEG|p.R1004L|1|0.15|ENSG00000072195|chr2:219467303-219467303|G/T|missense_variant'] 44675 19913 IPLVKNWYR True H1975_Epitope_Rep2 1187.68151336095 1187.68040993586 82.581 2 -1.4584336962381321 0.4031749751039775 1.0 ['ENSG00000174231|ENST00000304992|PRPF8'] 112898 14915 TPPVRGRA True NCI_RA007_Epitope_Rep5 852.4929843152798 852.49188993586 64.038 2 -1.4584358848428653 0.4031749751039775 1.0 ['nc|ENSG00000134222|Q6PGN9-3|PSRC1', 'ENST00000492431.1_1_1:109822777-109824720:-|nuORF', 'ENSG00000134222|ENST00000369909|PSRC1', 'nc|ENSG00000134222|Q6PGN9|PSRC1', 'nc|ENSG00000134222|Q6PGN9-4|PSRC1'] 92804 23444 RRLHRLWG True PC9_epitope_Rep6 1092.64171423764 1092.64060993586 103.28 2 -1.4585415309508958 0.4031819672899386 1.0 ['ENSG00000183798|ENST00000332312|EMILIN3'] 131376 23364 VVSPHGGL True PC9_epitope_Rep3 764.41808803952 764.41698993586 95.15 2 -1.4585911403107252 0.40319595117036483 1.0 ['nc|ENSG00000130150|Q8NHP6-2|MOSPD2', 'ENSG00000130150|ENST00000380492|MOSPD2'] 34995 25187 GRALWHLRLA True H1975_Epitope_Rep3 1191.69889476059 1191.6972449037899 104.77 3 -1.4585932283817216 0.40319595117036483 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 110863 11220 TLAASRLL True PC9_epitope_Rep2 843.51780208079 843.51670993586 48.487 2 -1.4587329945404768 0.40324980376995984 1.0 ['nc|ENSG00000142025|Q8IXT2-2|DMRTC2'] 36505 6679 GVKGAKIK True PC9_epitope_Rep4 799.5279728416699 799.52686993586 32.871 2 -1.4588422210880474 0.40328022492970944 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 78733 16420 PEFRYTAGI True PC9_epitope_Rep2 1052.52909504048 1052.5279899358602 68.404 2 -1.4588652778763773 0.4032872154731083 1.0 ['ENSG00000106624|ENST00000223357|AEBP1', 'nc|ENSG00000106624|Q8IUX7-2|AEBP1'] 97970 4608 SHRPKRRRFH True PC9_epitope_Rep4 1375.78100167511 1375.77934490379 24.235 3 -1.458964592094768 0.40328928872645486 1.0 ['nc|ENSG00000136504|O95251-4|KAT7', 'ENSG00000136504|ENST00000259021|KAT7'] 8612 9691 AVAKAAPAP True PC9_epitope_Rep6 794.4650382319398 794.46394993586 47.661 2 -1.458966210805594 0.40328928872645486 1.0 ['nc|ENSG00000151893|Q86Y37-2|CACUL1', 'ENSG00000151893|ENST00000369151|CACUL1'] 86887 21473 QRRQQVFRR True PC9_epitope_Rep6 1272.7275691199197 1272.72592490379 95.474 3 -1.4590106043381026 0.40328928872645486 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1'] 18169 12404 EIPVTLII True PC9_epitope_Rep1 896.55826991044 896.55716993586 52.572 2 -1.4590421782261045 0.40328928872645486 1.0 ['ENSG00000122557|ENST00000311350|HERPUD2'] 127409 22730 VQRAGGPL True PC9_epitope_Rep2 796.4555361773998 796.45498496793 92.928 1 -1.4591284142809493 0.40328928872645486 1.0 ['ENST00000542275.5_1_2:120124645-120124819:+|nuORF'] 136688 13902 YIFRTFFKIMF True PC9_epitope_Rep1 1511.7999142414699 1511.7988099358602 58.311 2 -1.4591677952078175 0.40328928872645486 1.0 ['nc|ENSG00000182077|Q3KNS1|PTCHD3'] 64083 7887 LQEAWRSI True PC9_epitope_Rep5 1001.5294293936499 1001.52832993586 35.28 2 -1.459172517207958 0.40328928872645486 1.0 ['ENSG00000135632|ENST00000389501|SMYD5'] 67647 21578 LTFFCTNAT True NCI_RA007_Epitope_Rep5 1016.4637179026 1016.46262993586 90.086 2 -1.4592284669106057 0.40329155441021436 1.0 ['nc|ENSG00000162572|P51172-1|SCNN1D', 'nc|ENSG00000162572|P51172-2|SCNN1D', 'ENSG00000162572|ENST00000379116|SCNN1D', 'SCNN1D|p.F185Sfs*12|1|0.36|ENSG00000162572|chr1:1286895-1286895|C/-|frameshift_variant'] 7844 6635 ATAIEDRLQA True H1975_Epitope_Rep3 1086.56693710118 1086.5658499358601 30.476 2 -1.4592364201990309 0.40329155441021436 1.0 ['nc|ENSG00000132932|Q9NTI2-1|ATP8A2', 'ENSG00000132932|ENST00000381655|ATP8A2', 'ENST00000491840.1_1_13:26141407-26501380:+|nuORF'] 53332 19486 KTPKQRLREL True NCI_RA007_Epitope_Rep5 1267.77245362367 1267.7713499358601 81.84 2 -1.4594423894984425 0.4033172468725109 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 126531 20340 VPPALPTA True PC9_epitope_Rep4 764.4432401582001 764.44214993586 86.382 2 -1.4595301833968752 0.4033172468725109 1.0 ['ATP13A2|p.A475T|1|0.2|ENSG00000159363|chr1:16996095-16996095|C/T|missense_variant'] 46325 14572 ITFKSRPSL True PC9_epitope_Rep5 1047.6076797143498 1047.60658993586 61.05 2 -1.4595677190781613 0.40332423599967204 1.0 ['ENSG00000179168|ENST00000334928|GGN', 'nc|ENSG00000179168|Q86UU5-2|GGN'] 10841 11999 DAIRAHRAGRK True NCI_RA007_Epitope_Rep5 1249.7115847026096 1249.71048993586 52.815 2 -1.4598115582087205 0.40334992679355786 1.0 ['ENST00000491136.6_1_1:52823963-52826194:-|nuORF', 'ENST00000460261.5_1_1:52822810-52825784:-|nuORF', 'nc|ENSG00000154222|Q5T0F9-3|CC2D1B', 'ENSG00000154222|ENST00000284376|CC2D1B', 'nc|ENSG00000154222|Q5T0F9|CC2D1B'] 100983 8831 SLSTVSRTL True PC9_epitope_Rep2 962.53965972418 962.53856993586 39.32 2 -1.459977265971271 0.40334992679355786 1.0 ['nc|ENSG00000162456|A6PVL3-2|KNCN', 'ENSG00000162456|ENST00000481882|KNCN'] 58613 19295 LFFILNRRF True NCI_RA007_Epitope_Rep5 1224.7131478423996 1224.71204993586 81.094 2 -1.4600012206666457 0.40335691529235385 1.0 ['ENST00000372398.5_1_9:132995575-132995641:+|nuORF'] 38388 24113 HGGGKFKS True H1975_Epitope_Rep3 816.4242360491199 816.42312993586 100.47 2 -1.4600392658585937 0.40335917917964814 1.0 ['ENST00000304979.7_1_1:43124098-43124146:+|nuORF'] 106600 3224 SWAGALHH True PC9_epitope_Rep6 877.41948502185 877.41838993586 18.423 2 -1.4600694360737172 0.40335917917964814 1.0 ['nc|ENSG00000116871|Q3KQU3-4|MAP7D1', 'ENSG00000116871|ENST00000474796|MAP7D1', 'nc|ENSG00000116871|Q3KQU3|MAP7D1', 'nc|ENSG00000116871|Q3KQU3-2|MAP7D1'] 29901 9062 FWDQWYLWYLR True H1975_Epitope_Rep1 1674.7983340183398 1674.79722993586 39.767 2 -1.4601723469556267 0.40338959228850185 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 79768 16293 PHVISHGF True NCI_RA007_Epitope_Rep5 892.4555361774 892.45442993586 69.427 2 -1.4603441167932039 0.4033918553308113 1.0 ['ENST00000469720.1_1_3:55545064-55681076:-|nuORF', 'ENST00000484530.5_1_3:55545064-55640922:-|nuORF'] 82318 18388 PTPTGSTKKP True PC9_epitope_Rep3 1012.55530978832 1012.55420993586 75.937 2 -1.4605127748303173 0.4033918553308113 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-3|VCAN'] 9435 8934 AVVTGIKK True NCI_RA007_Epitope_Rep2 814.5276384885 814.52708496793 39.376 1 -1.4606143187388607 0.403433979058818 1.0 ['ENSG00000151881|ENST00000397080|TMEM267'] 26998 20883 FLLFLAIYLF True PC9_epitope_Rep1 1258.7365686255796 1258.73546993586 85.146 2 -1.4606909060466422 0.40344096600025764 1.0 ['ENSG00000181698|ENST00000641665|OR5T1'] 140206 4440 YWEKFFQQRGK True NCI_RA007_Epitope_Rep4 1515.7622828627898 1515.76063490379 23.446 3 -1.4607256457613567 0.4034596645741591 1.0 ['nc|ENSG00000010165|Q8N6R0-1|METTL13', 'nc|ENSG00000010165|Q8N6R0-4|METTL13', 'ENSG00000010165|ENST00000361735|METTL13'] 122473 8341 VGSPQAPP True PC9_epitope_Rep3 751.3864535580699 751.3859049679301 37.055 1 -1.4607454447520496 0.40347836271007786 1.0 ['nc|ENSG00000125861|Q9GZZ7-3|GFRA4'] 119314 13242 VELQVKSV True PC9_epitope_Rep3 900.5280324113199 900.52692993586 55.968 2 -1.4609100286938146 0.4035556180170051 1.0 ['nc|ENSG00000100095|Q9BYH1-2|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-3|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-5|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-4|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-7|SEZ6L', 'nc|ENSG00000100095|Q9BYH1-6|SEZ6L', 'ENSG00000100095|ENST00000248933|SEZ6L'] 78495 8075 PDFTQESRGY True H1975_Epitope_Rep2 1198.5254662120199 1198.52436993586 36.008 2 -1.4612163485313265 0.40358129948002064 1.0 ['ENSG00000168769|ENST00000380013|TET2', 'nc|ENSG00000168769|Q6N021-2|TET2', 'nc|ENSG00000168769|Q6N021-3|TET2', 'TET2|p.S75C|1|0.25|ENSG00000168769|chr4:105234165-105234165|A/T|missense_variant', 'TET2|p.G613Wfs*25|1|0.42|ENSG00000168769|chr4:105235777-105235778|-/T|frameshift_variant'] 5097 8913 ALLSGVLTLK True NCI_RA007_Epitope_Rep2 1013.64848189717 1013.64738993586 39.294 2 -1.4612295355282081 0.40358129948002064 1.0 ['nc|ENSG00000004809|Q86VW1-2|SLC22A16', 'ENSG00000004809|ENST00000368919|SLC22A16', 'SLC22A16|p.M513I|2|0.13|ENSG00000004809|chr6:110425068-110425068|C/T|missense_variant', 'ENST00000460159.1_1_6:110746078-110746521:-|nuORF'] 75214 22987 NPEVLKDDF True PC9_epitope_Rep2 1075.51858992643 1075.51748993586 93.913 2 -1.461360171677011 0.4035882842052255 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14'] 93203 21749 RRRRRKKGE True PC9_epitope_Rep5 1240.77010263824 1240.7690099358601 88.686 2 -1.461513042596409 0.4035975267003935 1.0 ['ENST00000331161.8_1_10:25304892-25304985:-|nuORF'] 70456 16973 LYRRFFVP True NCI_RA007_Epitope_Rep3 1096.6181848284 1096.61767496793 74.627 1 -1.4615699133420552 0.4035975267003935 1.0 ['ENSG00000158315|ENST00000372990|RHBDL2'] 26690 14353 FLDDRHRWQRL True H1975_Epitope_Rep3 1540.801127983 1540.80002993586 60.557 2 -1.4616093189157402 0.4035975267003935 1.0 ['ENSG00000125650|ENST00000245810|PSPN'] 29562 25695 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 108.18 3 -1.4616848700345373 0.4036162214701439 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 82982 15007 PYEPFTMVA True PC9_epitope_Rep1 1053.48411899401 1053.48302993586 62.545 2 -1.4617479724468474 0.403653609696118 1.0 ['nc|ENSG00000030304|O15146-3|MUSK', 'nc|ENSG00000030304|O15146-2|MUSK', 'ENSG00000030304|ENST00000374448|MUSK'] 12703 19403 DLFIHIFREWY True PC9_epitope_Rep5 1537.7717849173298 1537.7706899358602 79.679 2 -1.4617740885968147 0.403653609696118 1.0 ['ENST00000416464.6_1_17:15587015-15587114:-|nuORF'] 89409 13895 RENEQLKK True PC9_epitope_Rep4 1043.5723568347898 1043.5712499358601 61.348 2 -1.461898803121446 0.40367928615759335 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 75618 12839 NQSDQLPGWSP True H1975_Epitope_Rep2 1227.5520153130299 1227.5514749679298 54.496 1 -1.4619153061292685 0.40367928615759335 1.0 ['ENST00000448516.6_1_16:31142309-31142426:+|nuORF'] 137718 14867 YMVVYLVI True PC9_epitope_Rep3 998.5510763550197 998.54996993586 62.323 2 -1.4620021396473513 0.4036815419384302 1.0 ['ENST00000602063.5_1_19:52495975-52496068:-|nuORF'] 140929 17714 YYYRDRDWRWV True H1975_Epitope_Rep3 1676.7848092125198 1676.78370993586 74.057 2 -1.4620633378596448 0.4036815419384302 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 78448 13545 PCLLYVYLLYL True NCI_RA007_Epitope_Rep1 1371.7512327135498 1371.75012993586 56.696 2 -1.462189580180322 0.40368379761361106 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 117593 16500 VAGQGRNAL True PC9_epitope_Rep5 884.4828135543999 884.48170993586 68.465 2 -1.462212518245924 0.40368379761361106 1.0 ['ENSG00000081479|ENST00000649046|LRP2'] 15130 11441 EAEIEYRERLF True NCI_RA007_Epitope_Rep1 1453.7201432672898 1453.71904993586 48.467 2 -1.4622497375009986 0.40368605318314343 1.0 ['ENSG00000014824|ENST00000264451|SLC30A9'] 60471 21803 LILQYYMLHET True PC9_epitope_Rep4 1422.7217234904201 1422.7206299358602 92.06 2 -1.4622664881255556 0.40368605318314343 1.0 ['ENSG00000259224|ENST00000412468|SLC35G6', 'ENSG00000177710|ENST00000382435|SLC35G5', 'ENSG00000164729|ENST00000297307|SLC35G3'] 53663 1902 KWRLEQLQGP True PC9_epitope_Rep3 1253.6880552933699 1253.6863949037902 10.473 3 -1.4623380773374832 0.40370474450845395 1.0 ['nc|ENSG00000119950|P50539|MXI1', 'nc|ENSG00000119950|P50539-4|MXI1', 'nc|ENSG00000119950|P50539-2|MXI1', 'ENSG00000119950|ENST00000332674|MXI1'] 87264 23646 QSRRARWFLSA True PC9_epitope_Rep1 1376.74255047772 1376.7414499358601 95.744 2 -1.4624871582511272 0.40373041706671664 1.0 ['ENST00000276925.6_1_9:22009008-22009314:-|nuORF'] 65613 12691 LSGLPDTVFEI True PC9_epitope_Rep4 1189.6230549949698 1189.6219499358601 56.669 2 -1.4624986487782716 0.40373041706671664 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 3775 10626 AGTYTLHII True PC9_epitope_Rep6 987.5389314481899 987.53782993586 51.691 2 -1.4625787269914068 0.4037373985738874 1.0 ['ENSG00000183668|ENST00000270077|PSG9', 'nc|ENSG00000183668|Q00887-2|PSG9', 'PSG9|p.K265*|1|0.38|ENSG00000183668|chr19:43259053-43259054|-/C|frameshift_variant'] 11476 12042 DGASRSSH True H1975_Epitope_Rep2 815.35219330767 815.35164496793 51.399 1 -1.4626473373555204 0.40373943381647037 1.0 ['nc|ENSG00000230246|P0DKV0-2|SPATA31C1', 'nc|ENSG00000230246|P0DKV0|SPATA31C1', 'nc|ENSG00000177910|B4DYI2|SPATA31C2'] 90188 18327 RHHSLDSWRP True NCI_RA007_Epitope_Rep3 1289.6377510560098 1289.63611490379 80.254 3 -1.462706033128676 0.40373943381647037 1.0 ['ENST00000588409.1_1_19:10738400-10738638:+|nuORF'] 42741 19502 IFDRELHRQTG True PC9_epitope_Rep4 1370.7054962626598 1370.70438993586 83.133 2 -1.46275995347266 0.40373943381647037 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2', 'chr1:183207943-183215453|223|30.46|0.17|7.49|+|2|None,LAMC2|1'] 46555 9185 ITRDFFDP True PC9_epitope_Rep3 1009.4868958753299 1009.48578993586 40.269 2 -1.46277881785094 0.40373943381647037 1.0 ['ENSG00000106404|ENST00000308344|CLDN15'] 341 7683 AAKASRDVI True PC9_epitope_Rep4 929.5294293936498 929.52832993586 36.932 2 -1.462835521485889 0.40373943381647037 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant'] 81097 19743 PPGGGSGG True NCI_RA007_Epitope_Rep3 584.25543938852 584.25489496793 86.067 1 -1.4628625359515446 0.40373943381647037 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.H598Tfs*38|1|0.13|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant', 'IRS1|p.Q1064Tfs*17|1|0.18|ENSG00000169047|chr2:226795553-226795554|-/C|frameshift_variant'] 36747 10914 GVPADQLRVIF True PC9_epitope_Rep1 1213.68190728377 1213.68080993586 46.866 2 -1.4629097067219694 0.40373943381647037 1.0 ['nc|ENSG00000185345|O60260-6|PRKN', 'nc|ENSG00000185345|O60260-7|PRKN', 'nc|ENSG00000185345|O60260-5|PRKN', 'nc|ENSG00000185345|O60260-8|PRKN', 'nc|ENSG00000185345|O60260-2|PRKN', 'ENSG00000185345|ENST00000366898|PRKN'] 61992 25403 LLLQLNNQ True PC9_epitope_Rep3 954.54983048506 954.54872993586 103.14 2 -1.4629443198666603 0.40374641456418664 1.0 ['ENSG00000177374|ENST00000619757|HIC1', 'nc|ENSG00000177374|Q14526|HIC1'] 138214 21760 YQSWVIAA True NCI_RA007_Epitope_Rep5 936.4705175351997 936.46942993586 90.815 2 -1.4629971136108455 0.403765102556898 1.0 ['ENSG00000196455|ENST00000356763|PIK3R4', 'ENST00000512677.1_1_3:130399450-130405071:-|nuORF', 'ENST00000512362.5_1_3:130399450-130405229:-|nuORF'] 77869 7782 PAGPGIPDL True PC9_epitope_Rep5 835.44396843419 835.44286993586 34.878 2 -1.4630161450674521 0.40377906296096844 1.0 ['ENST00000232974.10_1_3:42706713-42706947:+|nuORF'] 127174 12520 VQEYREAL True PC9_epitope_Rep4 1006.5083595958997 1006.50726993586 55.978 2 -1.463023313467355 0.40377906296096844 1.0 ['ENSG00000044446|ENST00000379942|PHKA2'] 24146 8790 EYSRKEVP True PC9_epitope_Rep1 1006.5083595958998 1006.50726993586 38.652 2 -1.463134806691712 0.403786042917852 1.0 ['ENSG00000187889|ENST00000343433|FYB2', 'ENST00000493000.5_1_1:57206466-57216840:-|nuORF'] 129619 9888 VTGYFTFTLY True NCI_RA007_Epitope_Rep2 1210.5910265907 1210.58992993586 43.09 2 -1.463192034510398 0.4038047295715289 1.0 ['ENST00000594655.5_1_19:43519232-43530590:-|nuORF', 'ENST00000595138.1_1_19:43519232-43530599:-|nuORF', 'ENSG00000243130|ENST00000320078|PSG11', 'ENST00000599245.1_1_19:43528837-43530575:-|nuORF', 'ENSG00000242221|ENST00000406487|PSG2'] 81162 17589 PPLLEKQT True PC9_epitope_Rep4 924.5280324113199 924.52692993586 75.671 2 -1.4632131147774 0.40381170906451574 1.0 ['nc|ENSG00000183337|Q6W2J9-4|BCOR', 'nc|ENSG00000183337|Q6W2J9-2|BCOR', 'ENSG00000183337|ENST00000378444|BCOR', 'nc|ENSG00000183337|Q6W2J9-3|BCOR', 'ENST00000490976.5_1_X:39931586-39937182:-|nuORF'] 54989 18394 LAIIVYMVP True H1975_Epitope_Rep2 1017.5932755201699 1017.5921699358599 76.303 2 -1.4632795809712447 0.4038279192273925 1.0 ['ENSG00000142494|ENST00000270570|SLC47A1', 'nc|ENSG00000142494|Q96FL8-3|SLC47A1', 'ENST00000495425.6_1_17:19458825-19480863:+|nuORF'] 137798 16391 YPDYKYRPRRK True NCI_RA007_Epitope_Rep1 1540.8262801016797 1540.8251899358602 67.87 2 -1.4632802246510914 0.4038279192273925 1.0 ['ENSG00000134595|ENST00000370536|SOX3', 'nc|ENSG00000129194|O60248-2|SOX15', 'ENSG00000129194|ENST00000250055|SOX15'] 18057 4815 EIISCPSSR True PC9_epitope_Rep4 990.4804305959001 990.47932993586 25.098 2 -1.4632816148238597 0.4038279192273925 1.0 ['ENST00000497230.2_1_1:170695565-170695829:+|nuORF'] 25424 16433 FEKYYQRL True PC9_epitope_Rep2 1145.58694426977 1145.58529490379 68.451 3 -1.4633306315953174 0.4038279192273925 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'nc|ENSG00000113971|Q7Z494-3|NPHP3', 'nc|ENSG00000113971|Q7Z494-6|NPHP3'] 35987 18637 GVAYVRPLAL True PC9_epitope_Rep4 1057.6284151589298 1057.62730993586 79.765 2 -1.4633533873536222 0.40384187669003946 1.0 ['ENST00000535678.1_1_2:223725777-223773458:+|nuORF', 'ENST00000392066.7_1_2:223725777-223773468:+|nuORF', 'ENST00000357430.7_1_2:223725777-223765478:+|nuORF'] 30087 5176 FYNPTFEWYWE True H1975_Epitope_Rep1 1580.66123140884 1580.6595749037901 24.973 3 -1.4633910494469424 0.40384187669003946 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2'] 64963 8382 LSDALRQWF True H1975_Epitope_Rep1 1134.5821932425 1134.58108993586 37.169 2 -1.463642836515063 0.4038441278722682 1.0 ['ENSG00000112159|ENST00000369393|MDN1'] 82389 9885 PTWRLLREER True H1975_Epitope_Rep1 1354.74696715182 1354.7458699358601 42.956 2 -1.4636489858525612 0.4038441278722682 1.0 ['ENST00000589874.2_1_19:1432091-1433000:+|nuORF'] 113868 17226 TRERRCQH True NCI_RA007_Epitope_Rep3 1084.5308434593198 1084.52974993586 75.655 2 -1.4637745310188435 0.40388374515702363 1.0 ['ENST00000366923.7_1_1:220213559-220219752:-|nuORF'] 53176 16367 KSSSGSGNP True NCI_RA007_Epitope_Rep1 819.37226004591 819.3717149679301 67.776 1 -1.463807579643722 0.40388374515702363 1.0 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2'] 56325 6219 LDREQTDRYEF True H1975_Epitope_Rep1 1470.6739213508597 1470.6728299358601 28.989 2 -1.4638451549143592 0.40388374515702363 1.0 ['ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7'] 29503 25609 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 105.99 3 -1.4638591059079977 0.40388374515702363 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 32921 13403 GIPISMSLLYL True PC9_epitope_Rep2 1205.67298239285 1205.67188993586 56.835 2 -1.463933254690191 0.4038907226631084 1.0 ['ENSG00000135108|ENST00000622495|FBXO21', 'nc|ENSG00000135108|O94952|FBXO21', 'FBXO21|p.I438Nfs*15|1|0.25|ENSG00000135108|chr12:117165500-117165501|-/C|frameshift_variant', 'FBXO21|p.D410Ifs*36|1|0.21|ENSG00000135108|chr12:117165575-117165584|CAGCGAGTCT/-|frameshift_variant'] 133458 17083 WGLAAGGG True NCI_RA007_Epitope_Rep3 687.33402406239 687.3334749679301 75.063 1 -1.4641651476920148 0.4039562240299643 1.0 ['nc|ENSG00000183688|Q8N5W9|RFLNB'] 87223 21962 QSPLSHDLI True PC9_epitope_Rep3 1008.5240096600401 1008.52290993586 89.778 2 -1.4641789643328842 0.4039632005243691 1.0 ['ENST00000569683.5_1_16:67144033-67168649:+|nuORF', 'ENSG00000125149|ENST00000219139|PHAF1', 'nc|ENSG00000125149|Q9BSU1-2|PHAF1', 'ENST00000569626.1_1_16:67154016-67168169:+|nuORF'] 76874 23326 NVILFMSVRVL True PC9_epitope_Rep3 1289.7529640490502 1289.7518699358602 95.003 2 -1.4643051136386183 0.40401699497875626 1.0 ['SLC8A3|p.E535Nfs*35|2|0.17|ENSG00000100678|chr14:70166820-70166820|C/-|frameshift_variant', 'ENST00000356921.6_1_14:70633434-70633566:-|nuORF'] 85330 8729 QLARFWRPLCA True NCI_RA007_Epitope_Rep2 1359.72339525627 1359.72175490379 38.599 3 -1.4643497838466868 0.4040214885125408 1.0 ['ENST00000569028.2_1_16:34712221-34712584:-|nuORF'] 18246 5180 EISGIRKTP True NCI_RA007_Epitope_Rep2 999.57129420563 999.57018993586 24.77 2 -1.464395536978237 0.4040214885125408 1.0 ['ENST00000489895.5_1_3:52514938-52524786:+|nuORF'] 102206 8164 SPSPKLRI True PC9_epitope_Rep3 896.5443511817999 896.54324993586 36.382 2 -1.4645663632854957 0.4040214885125408 1.0 ['ENST00000359451.6_1_6:110501026-110501203:-|nuORF', 'ENST00000392586.5_1_6:110499922-110501203:-|nuORF'] 129726 18293 VTKERMII True PC9_epitope_Rep6 988.5739370579199 988.57282993586 83.006 2 -1.4645772410273499 0.4040214885125408 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 99105 8952 SLAEQPHGAV True PC9_epitope_Rep4 1007.5036085686299 1007.50250993586 41.978 2 -1.4646079367890001 0.40402373512166007 1.0 ['ENST00000262518.8_1_16:30724671-30724962:+|nuORF'] 96787 18897 SEREYLEWDEI True PC9_epitope_Rep1 1467.6517889239497 1467.65068993586 77.472 2 -1.4646523380393217 0.40402373512166007 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 87283 8800 QSSYIREQYVL True H1975_Epitope_Rep1 1384.69867954672 1384.6975899358602 38.775 2 -1.4647392666069985 0.40405388009221876 1.0 ['ENSG00000145198|ENST00000691901|VWA5B2', 'ENST00000461141.5_1_3:183952309-183959823:+|nuORF'] 37092 13060 GVSLAGPAAL True PC9_epitope_Rep5 854.48616759934 854.48506993586 55.241 2 -1.4649378503306008 0.40405388009221876 1.0 55328 12417 LARVKQEEQRY True PC9_epitope_Rep4 1418.7630111387798 1418.76190993586 55.567 2 -1.4649396333252374 0.40405388009221876 1.0 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-5|TACC1', 'nc|ENSG00000147526|O75410-4|TACC1', 'nc|ENSG00000147526|O75410-6|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'nc|ENSG00000147526|O75410-10|TACC1', 'ENST00000521568.1_1_8:38697778-38700914:+|nuORF', 'nc|ENSG00000147526|O75410-8|TACC1'] 19161 8085 ELKAAYDQRQR True H1975_Epitope_Rep1 1376.71606094636 1376.71441490379 36.042 3 -1.464963773990814 0.40405388009221876 1.0 ['ENST00000413697.5_1_2:100019089-100065949:-|nuORF', 'nc|ENSG00000135945|Q9UBZ9-2|REV1', 'ENSG00000135945|ENST00000258428|REV1'] 57628 13963 LELRKVPP True PC9_epitope_Rep6 950.5913013742199 950.59020993586 65.563 2 -1.4649824069810589 0.40405388009221876 1.0 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 24650 18980 FASIQQANPI True PC9_epitope_Rep2 1087.56620882519 1087.5651099358602 78.372 2 -1.4649831307800676 0.40405388009221876 1.0 ['PKD2L2|p.G458S|1|0.16|ENSG00000078795|chr5:137921679-137921679|G/A|missense_variant'] 124025 19573 VKMFIKYIKV True NCI_RA007_Epitope_Rep5 1267.7726368644699 1267.7715299358601 82.182 2 -1.4650238463297454 0.4040959625511995 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant'] 23549 17025 EWTVYRKKK True PC9_epitope_Rep1 1236.69789170108 1236.69625490379 70.311 3 -1.4650805014085844 0.40410293618565024 1.0 ['ENST00000565271.1_1_17:74668237-74668399:+|nuORF'] 67660 14578 LTFLAWWFEW True H1975_Epitope_Rep1 1397.6808446546097 1397.6797499358602 61.28 2 -1.4651293856002532 0.40410990965688337 1.0 ['ENSG00000241563|ENST00000377049|CORT', 'nc|ENSG00000251503|Q8N2Z9-2|CENPS'] 121820 12985 VGNGKGAA True NCI_RA007_Epitope_Rep4 672.3554877829599 672.35493496793 57.047 1 -1.4652796384851463 0.4041285853042023 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 83559 3515 QDRLLIPRWR True H1975_Epitope_Rep3 1351.7836870137098 1351.78204490379 18.456 3 -1.4653051309957295 0.4041542332221637 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 111664 8269 TLPDGSRLQL True H1975_Epitope_Rep3 1098.6033226099 1098.6022299358601 36.788 2 -1.46530985144885 0.4041542332221637 1.0 ['ENSG00000124827|ENST00000379491|GCM2'] 130192 19007 VTRYSCPR True PC9_epitope_Rep6 980.4861846826799 980.48508993586 85.755 2 -1.4653967111360593 0.4041751503662618 1.0 ['ENST00000556296.1_1_14:20923648-20924010:+|nuORF', 'ENST00000557159.5_1_14:20923648-20923933:+|nuORF'] 88274 9264 QYGEHFRIRQN True H1975_Epitope_Rep3 1446.71164427226 1446.70999490379 40.626 3 -1.4654204243821025 0.4041751503662618 1.0 ['ENSG00000124103|ENST00000371328|FAM209A'] 111202 9189 TLFPESWLWR True H1975_Epitope_Rep3 1333.68190728377 1333.68080993586 40.337 2 -1.4654840884411366 0.4041751503662618 1.0 ['nc|ENSG00000291164|Q6ZMU1|C3P1'] 111476 11531 TLLHQRKK True H1975_Epitope_Rep1 1022.6348975216999 1022.6338099358601 49.337 2 -1.4655773826181488 0.4042172269743386 1.0 ['nc|ENSG00000153982|Q8N9F7-3|GDPD1', 'nc|ENSG00000153982|Q8N9F7-2|GDPD1', 'ENSG00000153982|ENST00000284116|GDPD1'] 36102 5082 GVEHRPGVGL True PC9_epitope_Rep4 1019.5512274673898 1019.55012993586 26.198 2 -1.4655876752690804 0.4042358998361807 1.0 ['ENST00000423620.6_1_8:95653352-95653454:+|nuORF'] 66155 12795 LSPDTVQRL True PC9_epitope_Rep4 1027.56620882519 1027.5651099358602 57.078 2 -1.4656298360137223 0.40424511191977813 1.0 ['ENSG00000184571|ENST00000616349|PIWIL3', 'nc|ENSG00000184571|Q7Z3Z3|PIWIL3'] 38207 24720 HETLLLRR True NCI_RA007_Epitope_Rep5 1036.61416207712 1036.61357496793 102.57 1 -1.4656721691655668 0.40424511191977813 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENST00000378192.2_1_9:35723947-35725691:-|nuORF'] 44563 10561 IPEEKVPVP True H1975_Epitope_Rep1 1006.5698972232998 1006.56880993586 45.575 2 -1.4657265469751795 0.40424511191977813 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 90389 9567 RILHVLYTDCI True H1975_Epitope_Rep3 1344.72239219676 1344.72128993586 41.808 2 -1.4658575945306849 0.40426801446070687 1.0 ['ENSG00000149577|ENST00000324225|SIDT2', 'nc|ENSG00000149577|Q8NBJ9-2|SIDT2', 'ENST00000529484.5_1_11:117061404-117064733:+|nuORF', 'ENST00000525065.1_1_11:117062460-117063438:+|nuORF'] 30217 11090 FYYRPRRRSL True NCI_RA007_Epitope_Rep4 1412.7789359864398 1412.7778299358602 49.531 2 -1.4658990872839646 0.40426801446070687 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 107962 8094 TC[Carbamidomethyl]ECVFPPAYT True H1975_Epitope_Rep1 1286.5311461188496 1286.5305749679299 36.079 1 -1.4659237153813927 0.40426801446070687 1.0 ['ENST00000599420.5_1_19:17312953-17313848:+|nuORF'] 121611 12764 VGLDLERR True NCI_RA007_Epitope_Rep2 956.54032843052 956.53922993586 54.268 2 -1.4659366009168675 0.40426801446070687 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33', 'nc|ENSG00000167612|Q7Z3H0-1|ANKRD33'] 30912 18376 GASDGVFRATV True PC9_epitope_Rep3 1078.54072235334 1078.5396299358601 75.893 2 -1.4660353247689684 0.40426801446070687 1.0 ['ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.T3539Sfs*28|1|0.35|ENSG00000086570|chr5:151521979-151521980|-/ATGAA|frameshift_variant'] 44372 14803 INALRRCFFWR True NCI_RA007_Epitope_Rep2 1480.7873924951598 1480.7862899358602 62.255 2 -1.4660663135722536 0.40426801446070687 1.0 ['nc|ENSG00000001626|P13569-2|CFTR', 'ENSG00000001626|ENST00000003084|CFTR', 'CFTR|p.S858Efs*38|1|0.24|ENSG00000001626|chr7:117595007-117595008|-/A|frameshift_variant', 'nc|ENSG00000001626|P13569-3|CFTR'] 123220 13889 VHLHWWLWWLW True NCI_RA007_Epitope_Rep2 1660.8455589942798 1660.8444699358602 58.679 2 -1.4660727157822033 0.40426801446070687 1.0 ['ENST00000361229.8_1_X:101976007-102003782:+|nuORF', 'ENST00000448867.1_1_X:102001081-102003782:+|nuORF'] 40955 7371 HWPWMKLFFKI True PC9_epitope_Rep6 1531.8162330119496 1531.81459490379 37.545 3 -1.466186575301593 0.40426801446070687 1.0 ['MYH8|p.K1812Rfs*39|1|0.41|ENSG00000133020|chr17:10392861-10392861|C/-|frameshift_variant', 'ENSG00000133020|ENST00000403437|MYH8', 'ENSG00000125414|ENST00000245503|MYH2', 'MYH2|p.A1133Pfs*37|1|0.47|ENSG00000125414|chr17:10529037-10529037|C/-|frameshift_variant', 'ENSG00000109063|ENST00000583535|MYH3'] 46003 2621 ISTSRVLT True NCI_RA007_Epitope_Rep4 875.5076313199099 875.50652993586 14.705 2 -1.4662027339768007 0.40426801446070687 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF', 'nc|ENSG00000198301|Q9NVU7-2|SDAD1'] 68529 20842 LTVTQAAV True H1975_Epitope_Rep1 801.4596184983299 801.4590749679301 86.612 1 -1.4662345447665235 0.40426801446070687 1.0 ['ENST00000580871.5_1_17:30358457-30363256:+|nuORF'] 89518 18639 REREREQRWRQ True NCI_RA007_Epitope_Rep2 1627.8403670260298 1627.83926993586 77.301 2 -1.4664499739919465 0.4043053524422346 1.0 ['ENST00000556564.5_1_14:89016912-89021018:-|nuORF'] 38268 7632 HFFEDYFFHKR True NCI_RA007_Epitope_Rep2 1571.73098273451 1571.72988993586 34.311 2 -1.4664687196297672 0.4043053524422346 1.0 ['nc|ENSG00000172421|Q8N7B9-2|EFCAB3', 'ENSG00000172421|ENST00000305286|EFCAB3'] 12257 18293 DIRNYILNY True PC9_epitope_Rep2 1182.6033226098998 1182.6022299358601 75.689 2 -1.4665257054332788 0.4043240207777622 1.0 ['nc|ENSG00000204764|Q9H2T7-2|RANBP17', 'ENST00000523727.1_1_5:170308890-170323149:+|nuORF', 'ENST00000519130.5_1_5:170289037-170336799:+|nuORF', 'ENST00000443155.5_1_5:170288887-170338173:+|nuORF', 'RANBP17|p.Y497*|1|0.18|ENSG00000204764|chr5:170953617-170953620|TACT/-|frameshift_variant', 'ENSG00000204764|ENST00000523189|RANBP17'] 28895 12764 FTEDVWLL True PC9_epitope_Rep5 1021.5120479940099 1021.51094993586 54.105 2 -1.4665773344551047 0.4043309896229395 1.0 ['ENST00000306052.10_1_1:53712307-53712415:-|nuORF'] 96602 4259 SELYQVLHACK True PC9_epitope_Rep3 1289.64380752289 1289.64217490379 21.496 3 -1.4667370818514485 0.404337958305061 1.0 ['ENSG00000157851|ENST00000288699|DPYSL5'] 74434 23588 NIVQNRSKIRR True PC9_epitope_Rep3 1382.82186342758 1382.82022490379 96.015 3 -1.4669611978040764 0.40436308340156746 1.0 ['ENSG00000256394|ENST00000537611|ASIC5', 'ASIC5|p.E97Vfs*12|1|0.38|ENSG00000256394|chr4:155863502-155863505|ACCT/-|frameshift_variant'] 22742 16307 EVAGAVWTRR True PC9_epitope_Rep3 1143.61489035311 1143.61378993586 67.861 2 -1.466970048778908 0.40436308340156746 1.0 ['ENST00000581616.2_1_17:16855864-16875385:-|nuORF'] 136827 17601 YITTSHSRL True PC9_epitope_Rep5 1076.56145779792 1076.56036993586 72.71 2 -1.4670152370773661 0.40436308340156746 1.0 ['ENSG00000132003|ENST00000590508|ZSWIM4', 'nc|ENSG00000132003|Q9H7M6|ZSWIM4'] 130922 12521 VVIFFGPC True NCI_RA007_Epitope_Rep4 880.4516966669198 880.45058993586 55.18 2 -1.4670317040198944 0.40436308340156746 1.0 ['OR4S2|p.V269Wfs*12|1|0.23|ENSG00000174982|chr11:55651707-55651707|G/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 101578 17412 SPDSVPERP True H1975_Epitope_Rep2 982.4719740871799 982.47086993586 72.268 2 -1.46707199985734 0.40436308340156746 1.0 ['ENSG00000171798|ENST00000304613|KNDC1', 'nc|ENSG00000171798|Q76NI1-4|KNDC1'] 15739 15516 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 66.38 2 -1.467134215023997 0.40436308340156746 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 78728 26359 PEFDEEVVFEN True H1975_Epitope_Rep3 1352.5772270013597 1352.57612993586 109.94 2 -1.4671488324008835 0.40436308340156746 1.0 ['ENSG00000028203|ENST00000436874|VEZT', 'ENST00000546398.5_1_12:95611596-95687545:+|nuORF', 'nc|ENSG00000028203|Q9HBM0-5|VEZT', 'nc|ENSG00000028203|Q9HBM0-6|VEZT'] 71237 4221 MFWLLQAYECP True NCI_RA007_Epitope_Rep2 1399.6304659578698 1399.62880490379 21.058 3 -1.467160371144778 0.40436308340156746 1.0 ['nc|ENSG00000179520|Q8NDX2-2|SLC17A8', 'ENSG00000179520|ENST00000323346|SLC17A8'] 57837 10483 LEPYKYLLQLP True H1975_Epitope_Rep1 1375.77513896227 1375.7740499358601 45.278 2 -1.467167692941739 0.40436308340156746 1.0 ['ENSG00000152904|ENST00000282841|GGPS1'] 27488 23802 FPCPGCEH True H1975_Epitope_Rep1 888.3258445307999 888.32474993586 98.803 2 -1.4672067394608475 0.40436308340156746 1.0 ['ENSG00000152503|ENST00000513154|TRIM36', 'nc|ENSG00000152503|Q9NQ86|TRIM36'] 90514 23457 RKDERKTV True PC9_epitope_Rep2 1030.5883412520998 1030.5872499358602 95.698 2 -1.4672230386214065 0.40436308340156746 1.0 ['ENST00000520515.5_1_5:133541561-133657575:-|nuORF', 'ENST00000518409.1_1_5:133640182-133644414:-|nuORF', 'ENST00000520693.5_1_5:133622066-133644414:-|nuORF', 'nc|ENSG00000273345|Q8IVW4-2|CDKL3', 'ENSG00000006837|ENST00000265334|CDKL3'] 20398 19768 EPLRPFLAP True PC9_epitope_Rep3 1038.58621599378 1038.5851099358601 81.266 2 -1.4672460934405709 0.40436308340156746 1.0 ['nc|ENSG00000128276|O75679-2|RFPL3', 'ENSG00000128276|ENST00000249007|RFPL3', 'RFPL2|p.S347T|1|0.38|ENSG00000128253|chr22:32190870-32190870|A/T|missense_variant', 'nc|ENSG00000128253|O75678-3|RFPL2', 'ENSG00000128253|ENST00000652607|RFPL2'] 115378 13477 TVEMMPGP True H1975_Epitope_Rep1 860.3772113973198 860.3766649679301 56.956 1 -1.4674295641237474 0.40437701773265333 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 127669 9105 VRFDLALDP True H1975_Epitope_Rep1 1044.56039516876 1044.55928993586 39.926 2 -1.467430886484984 0.40437701773265333 1.0 ['ENSG00000156886|ENST00000389202|ITGAD'] 115944 10188 TVPQRMWSHFW True H1975_Epitope_Rep1 1473.69757443125 1473.69646993586 44.128 2 -1.4676040699109445 0.4044073783818558 1.0 ['nc|ENSG00000103429|Q9NZS9-2|BFAR', 'ENSG00000103429|ENST00000261658|BFAR'] 81232 21225 PPMSTVIHIRS True PC9_epitope_Rep3 1236.66487732064 1236.66322490379 86.932 3 -1.46772810601118 0.4044260415935621 1.0 ['ENSG00000185201|ENST00000616316|IFITM2'] 103833 5827 SRIDCFSEV True H1975_Epitope_Rep2 1054.47534521546 1054.4742499358601 27.404 2 -1.4678341366819672 0.40443300777823266 1.0 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000490753.1_1_20:2637050-2637903:+|nuORF', 'ENST00000466447.5_1_20:2636822-2638033:+|nuORF', 'ENST00000492135.5_1_20:2636822-2638937:+|nuORF', 'ENST00000471023.1_1_20:2637149-2637577:+|nuORF'] 97511 25084 SGPRVQRSLTA True PC9_epitope_Rep5 1170.6469187573798 1170.64528490379 101.63 3 -1.4679415212820048 0.4044469396587015 1.0 ['nc|ENSG00000138759|Q86XX4|FRAS1', 'ENSG00000138759|ENST00000512123|FRAS1'] 31108 9394 GCDAQAVP True NCI_RA007_Epitope_Rep2 759.32213904935 759.3215949679301 41.149 1 -1.4679946962310315 0.4044469396587015 1.0 ['nc|ENSG00000151090|P10828-2|THRB'] 39444 18601 HNAEIALPVL True PC9_epitope_Rep3 1075.60259433391 1075.6014899358602 76.771 2 -1.4681492791454152 0.4044772977145664 1.0 ['ENST00000577711.1_1_17:73389565-73389709:-|nuORF'] 55923 15021 LDGTEINGRN True PC9_epitope_Rep5 1087.52580056519 1087.52470993586 62.782 2 -1.4682292033088364 0.40448649723395047 1.0 ['nc|ENSG00000124193|Q13247-3|SRSF6', 'ENSG00000124193|ENST00000244020|SRSF6', 'ENST00000414124.1_1_17:16520269-16520722:-|nuORF'] 19013 23540 ELGHVVGFWHE True NCI_RA007_Epitope_Rep5 1308.6251206836398 1308.6234749037899 97.859 3 -1.4682652198404464 0.40448649723395047 1.0 ['MED20-TLL2|1|fusion', 'ENSG00000095587|ENST00000357947|TLL2', 'ENST00000518656.5_1_8:22034120-22035374:+|nuORF', 'nc|ENSG00000168487|P13497-3|BMP1', 'TLL2|p.L355Cfs*37|2|0.47|ENSG00000095587|chr10:96410460-96410460|G/-|frameshift_variant', 'ENST00000518913.5_1_8:22034120-22058713:+|nuORF', 'nc|ENSG00000168487|P13497-4|BMP1', 'nc|ENSG00000168487|P13497-5|BMP1', 'nc|ENSG00000168487|P13497-2|BMP1', 'nc|ENSG00000168487|P13497-6|BMP1', 'ENST00000520982.5_1_8:22034120-22069238:+|nuORF', 'ENSG00000168487|ENST00000306385|BMP1'] 22499 8391 ETIRIQWERD True NCI_RA007_Epitope_Rep2 1344.6786128084798 1344.6775099358601 37.279 2 -1.4682699661044927 0.40448649723395047 1.0 ['ENSG00000170819|ENST00000302334|BFSP2'] 79837 26712 PIFPWYAFQL True PC9_epitope_Rep1 1280.65938093404 1280.65828993586 108.6 2 -1.4683487497009353 0.40450515777408713 1.0 ['ENST00000378088.1_1_9:35737475-35737712:-|nuORF'] 79496 23567 PGPVHGGG True H1975_Epitope_Rep1 676.32927303512 676.32872496793 97.888 1 -1.4684493237493614 0.4045447103127266 1.0 ['ENST00000546812.1_1_12:109210822-109217118:-|nuORF', 'ENST00000343638.9_1_17:42283996-42284245:-|nuORF'] 62944 11787 LNDKLRLTQNY True H1975_Epitope_Rep1 1376.7412130650398 1376.7401099358601 50.331 2 -1.4684566753485673 0.4045447103127266 1.0 ['nc|ENSG00000175505|Q9UBD9-2|CLCF1', 'ENSG00000175505|ENST00000312438|CLCF1'] 103025 16857 SQKIMIPPL True NCI_RA007_Epitope_Rep3 1025.5943381493298 1025.59324993586 74.179 2 -1.468487706661577 0.4045447103127266 1.0 ['chr1:155904801-155910450|142|12.94|0.22|5.86|-|0|None,RIT1|1', 'chr1:155904502-155910450|201|12.37|0.6|4.36|-|0|RIT1,RIT1|1'] 95808 22223 SDFFPGGPGL True NCI_RA007_Epitope_Rep5 992.4603467743198 992.45924993586 92.629 2 -1.468541043119858 0.4045447103127266 1.0 ['ENST00000510104.5_1_5:140071123-140075505:+|nuORF'] 117617 14041 VAHHGENPVSC True H1975_Epitope_Rep2 1148.5032912988 1148.50218993586 59.16 2 -1.4685816522790736 0.40455167413194243 1.0 ['ENSG00000125686|ENST00000300651|MED1', 'nc|ENSG00000125686|Q15648-3|MED1'] 71624 20740 MLLTEPLEK True PC9_epitope_Rep6 1072.58383303528 1072.58272993586 92.535 2 -1.4686144876483236 0.40457033260045844 1.0 ['PLCB2|p.A1136Qfs*3|1|0.32|ENSG00000137841|chr15:40288867-40288867|C/-|frameshift_variant', 'nc|ENSG00000137841|Q00722-3|PLCB2', 'nc|ENSG00000137841|Q00722-2|PLCB2', 'ENSG00000137841|ENST00000260402|PLCB2', 'ENST00000558588.5_1_15:40583969-40599873:-|nuORF'] 71234 11851 MFVLEQEEYQR True H1975_Epitope_Rep1 1470.68131523042 1470.6802099358601 50.583 2 -1.4686213757380664 0.40457256461232605 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14'] 35954 13908 GVARVLREMWS True NCI_RA007_Epitope_Rep1 1302.6866753943798 1302.68617496793 58.121 1 -1.4687433448423035 0.40457256461232605 1.0 ['ENST00000541683.1_1_11:61582434-61582803:-|nuORF', 'ENST00000545245.5_2_11:61580788-61582536:-|nuORF'] 82633 19520 PVLITRPLE True PC9_epitope_Rep6 1036.62808080576 1036.6269899358601 87.747 2 -1.4688922214884215 0.4046029165838313 1.0 ['MYBPC3|p.A741Qfs*13|1|0.25|ENSG00000134571|chr11:47338607-47338607|C/-|frameshift_variant', 'nc|ENSG00000134571|Q14896-2|MYBPC3', 'ENSG00000134571|ENST00000545968|MYBPC3'] 58305 14435 LETLETWVM[Oxidation]P True PC9_epitope_Rep2 1233.59512637541 1233.5940299358601 60.792 2 -1.4689834683030392 0.4046215735803162 1.0 ['ENSG00000103489|ENST00000261381|XYLT1'] 119636 12486 VESELRSI True PC9_epitope_Rep3 931.49746055903 931.49636993586 53.052 2 -1.4690328470402356 0.40462853601206833 1.0 ['ENSG00000134308|ENST00000238081|YWHAQ', 'ENST00000460093.1_1_2:9768976-9770356:-|nuORF'] 96931 8155 SETVSQRTI True PC9_epitope_Rep2 1019.52473793603 1019.52364993586 36.726 2 -1.4692705314852377 0.40467754195170436 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'AFF2|p.P472Nfs*24|2|0.14|ENSG00000155966|chrX:148953596-148953596|C/AA|frameshift_variant', 'nc|ENSG00000155966|P51816-7|AFF2', 'AFF2|p.G627R|1|0.31|ENSG00000155966|chrX:148955924-148955924|G/C|missense_variant'] 123911 6665 VKIKLHKII True PC9_epitope_Rep2 1090.75903540566 1090.7579299358601 31.042 2 -1.4692752813221759 0.40467754195170436 1.0 ['ENSG00000085760|ENST00000263629|MTIF2', 'MTIF2|p.G590A|1|0.14|ENSG00000085760|chr2:55240112-55240112|C/G|missense_variant'] 70967 11068 MEPPGGAY True H1975_Epitope_Rep2 820.3425401407599 820.3419949679301 47.604 1 -1.4693414706578238 0.4046914648549411 1.0 ['ENSG00000185105|ENST00000409745|MYADML2'] 100827 22143 SLRWRDQIYRR True PC9_epitope_Rep3 1547.84332714815 1547.8422299358601 90.461 2 -1.469367919684213 0.4046914648549411 1.0 ['ENST00000285279.9_1_7:55540109-55540292:-|nuORF'] 75191 24925 NNRGKKKIPRF True PC9_epitope_Rep2 1356.8102361147196 1356.80912993586 101.54 2 -1.4695962931219801 0.4047070652745788 1.0 ['DYRK4|p.R355Kfs*16|1|0.21|ENSG00000010219|chr12:4610195-4610196|-/A|frameshift_variant'] 66153 9872 LSPDSTKEL True H1975_Epitope_Rep2 988.50769088956 988.50658993586 42.96 2 -1.469629103968495 0.4047070652745788 1.0 ['nc|ENSG00000171777|Q8TDF6-9|RASGRP4'] 14906 16029 DYKGDATVFF True PC9_epitope_Rep1 1161.5342399905699 1161.5331499358601 66.468 2 -1.4699113623836786 0.4047070652745788 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 131400 8058 VVTFHANFNYV True NCI_RA007_Epitope_Rep2 1309.6455217750502 1309.6444299358602 35.975 2 -1.4699502454932716 0.4047070652745788 1.0 ['nc|ENSG00000261130|Q2QL34-2|MPV17L', 'ENSG00000156968|ENST00000396385|MPV17L'] 4488 24105 AKIIAEGANG True H1975_Epitope_Rep3 942.51344497634 942.51234993586 100.44 2 -1.469971588231882 0.4047070652745788 1.0 ['nc|ENSG00000148672|P00367-3|GLUD1', 'GLUD2|p.P408Qfs*23|1|0.53|ENSG00000182890|chrX:121048903-121048903|G/-|frameshift_variant', 'ENSG00000182890|ENST00000328078|GLUD2', 'ENSG00000148672|ENST00000277865|GLUD1', 'nc|ENSG00000148672|P00367-2|GLUD1'] 110993 19545 TLDEIYNRK True PC9_epitope_Rep5 1150.59823722946 1150.5971499358602 80.232 2 -1.4699996466201508 0.4047070652745788 1.0 ['ENSG00000149311|ENST00000675843|ATM', 'ATM|p.I1525Nfs*6|1|0.17|ENSG00000149311|chr11:108292754-108292755|-/A|frameshift_variant'] 107087 6615 SYMFILVAI True PC9_epitope_Rep2 1055.5725400755898 1055.57144993586 30.855 2 -1.4700075998488746 0.4047070652745788 1.0 ['ENSG00000150261|ENST00000279783|OR8K1'] 17600 24395 EHLRELPWK True NCI_RA007_Epitope_Rep5 1206.6509415086596 1206.6498499358602 101.3 2 -1.470094770482379 0.4047070652745788 1.0 ['ENSG00000134109|ENST00000256497|EDEM1'] 36699 23290 GVMGRILELKN True PC9_epitope_Rep5 1228.6961774489198 1228.69567496793 94.569 1 -1.4701034747229396 0.4047070652745788 1.0 ['nc|ENSG00000132321|Q86XH1-5|IQCA1', 'ENSG00000132321|ENST00000409907|IQCA1', 'nc|ENSG00000132321|Q86XH1-2|IQCA1'] 55878 8487 LDFWYTYVY True PC9_epitope_Rep2 1268.57537652656 1268.57426993586 38.011 2 -1.4701090570079558 0.4047070652745788 1.0 ['OR9G4|p.S75Y|1|0.25|ENSG00000172457|chr11:56743543-56743543|G/T|missense_variant'] 114762 8954 TSWHHSDLLRK True H1975_Epitope_Rep1 1378.7105816431 1378.7094899358601 39.346 2 -1.4701188861553234 0.4047070652745788 1.0 ['ENSG00000164151|ENST00000296564|ICE1'] 131043 3650 VVLLRLKL True PC9_epitope_Rep2 952.6797224558 952.67862993586 19.312 2 -1.4701812817338356 0.4047070652745788 1.0 ['ENSG00000162944|ENST00000295049|RFTN2'] 85636 11665 QLPWWQWLKWR True NCI_RA007_Epitope_Rep1 1625.86193733441 1625.8608499358602 49.347 2 -1.4702974247034002 0.4047070652745788 1.0 ['ENST00000551099.5_1_12:113659271-113664634:+|nuORF'] 81652 24326 PRSRHRRT True H1975_Epitope_Rep3 1064.60639135808 1064.6052899358601 101.3 2 -1.4703617703476584 0.4047070652745788 1.0 ['ENST00000529477.5_1_1:32385166-32403656:-|nuORF'] 88759 11097 RDGDRLWYENP True PC9_epitope_Rep2 1419.6531263366296 1419.6520299358601 48.009 2 -1.4707126623492315 0.4047958658747603 1.0 ['ENSG00000130508|ENST00000252804|PXDN'] 57539 21953 LEKSVPLAVL True PC9_epitope_Rep1 1067.65904658087 1067.65847496793 89.261 1 -1.4708004214974755 0.4048262074287117 1.0 ['ENST00000549242.1_1_12:120637045-120638589:-|nuORF'] 32957 16736 GISLLSCFPN True PC9_epitope_Rep5 1049.52156713189 1049.52046993586 69.382 2 -1.4709553848452153 0.4048401239258783 1.0 ['ENSG00000128274|ENST00000642412|A4GALT'] 128241 17720 VRVVRSSP True NCI_RA007_Epitope_Rep5 898.5348491272599 898.53374993586 74.941 2 -1.4709567557779029 0.4048401239258783 1.0 ['ENSG00000107669|ENST00000224652|ATE1'] 57820 20348 LEPQGVFSLFP True PC9_epitope_Rep4 1232.6441247927198 1232.64302993586 86.413 2 -1.4709912704620518 0.4048587729143285 1.0 ['ENST00000570265.5_1_15:36871929-37039277:+|nuORF', 'ENST00000567573.5_1_15:36871929-36940867:+|nuORF'] 68379 2691 LTSQREGRW True NCI_RA007_Epitope_Rep2 1131.5785048443897 1131.57685490379 14.693 3 -1.4710841563116348 0.4048891123139694 1.0 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2', 'ENST00000479701.5_1_22:50714135-50720918:-|nuORF', 'ENST00000479818.5_1_22:50717015-50717261:-|nuORF'] 82812 17726 PVSIRFGR True PC9_epitope_Rep4 930.5399345077 930.53882993586 76.207 2 -1.471266868607994 0.40493114171479344 1.0 ['ENST00000531290.5_1_11:118889791-118894106:+|nuORF', 'ENSG00000196655|ENST00000533632|TRAPPC4', 'ENST00000447216.2_1_11:118889505-118891019:+|nuORF'] 131042 3541 VVLLRLKL True PC9_epitope_Rep2 952.6797224558 952.67862993586 18.899 2 -1.4713361748437095 0.4049497889851413 1.0 ['ENSG00000162944|ENST00000295049|RFTN2'] 119570 8788 VERHRSVMA True H1975_Epitope_Rep1 1083.56074660527 1083.55964993586 38.731 2 -1.4713446665841294 0.40495201131621095 1.0 ['ENSG00000064547|ENST00000407877|LPAR2'] 123425 9493 VIDWEYWRPQW True H1975_Epitope_Rep1 1576.7462984454799 1576.7452099358602 41.434 2 -1.471403784128952 0.40495201131621095 1.0 ['HYAL4|p.D173Ifs*14|1|0.2|ENSG00000106302|chr7:123868788-123868788|C/-|frameshift_variant', 'ENSG00000106302|ENST00000223026|HYAL4'] 7251 20760 ARLKYEKEEME True NCI_RA007_Epitope_Rep5 1424.6969652945597 1424.6958699358602 86.829 2 -1.4714428380163038 0.4049589675247247 1.0 ['nc|ENSG00000118307|Q6TDU7-3|DNAI7', 'ENSG00000118307|ENST00000395987|DNAI7', 'ENST00000557684.5_1_12:25267803-25348012:-|nuORF', 'nc|ENSG00000118307|Q6TDU7|DNAI7'] 107995 16243 TCWEWYWP True H1975_Epitope_Rep2 1169.46405225577 1169.46241490379 67.687 3 -1.4715929903132055 0.40502408004862767 1.0 ['ENST00000409198.5_2_2:152506865-152507290:-|nuORF'] 103404 18123 SQYDWSQPI True PC9_epitope_Rep1 1122.4981888350198 1122.49708993586 74.501 2 -1.4716105696426838 0.40502408004862767 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 131066 18408 VVLTLPTS True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 77.617 2 -1.4716299683687437 0.40502408004862767 1.0 ['ENST00000403963.5_1_7:14249142-14880939:-|nuORF', 'ENSG00000136267|ENST00000402815|DGKB', 'ENST00000477401.5_1_7:14660999-14880939:-|nuORF'] 19820 9714 ELTRWLQEFTR True H1975_Epitope_Rep1 1477.7677621660496 1477.7666699358601 42.292 2 -1.471681930734636 0.40502408004862767 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 3082 21219 AGAGRAVGRKF True PC9_epitope_Rep4 1088.6203100867199 1088.61920993586 89.784 2 -1.471727885858279 0.40502408004862767 1.0 ['ENST00000526707.5_1_11:9228319-9286554:-|nuORF'] 109096 13346 TFFPYSSNPAN True PC9_epitope_Rep6 1243.55095268387 1243.54930490379 62.996 3 -1.4717404098371252 0.40502408004862767 1.0 ['ENSG00000099219|ENST00000339450|ERMP1'] 21234 5585 ERGEDCHQD True PC9_epitope_Rep3 1087.39888579991 1087.3977899358601 26.561 2 -1.4719204626865936 0.40504967855055524 1.0 ['ENST00000360833.5_1_16:67233165-67233273:+|nuORF'] 113557 24533 TQYAIFVK True NCI_RA007_Epitope_Rep1 968.5331177917599 968.53202993586 101.63 2 -1.4719241781072447 0.40504967855055524 1.0 ['nc|ENSG00000171105|P06213-2|INSR', 'ENSG00000171105|ENST00000302850|INSR'] 36306 20698 GVGQANVP True PC9_epitope_Rep3 740.3817025307999 740.38115496793 84.889 1 -1.471976624505552 0.40506832181973323 1.0 ['CHD7|p.G1233V|1|0.22|ENSG00000171316|chr8:60830497-60830497|G/T|missense_variant'] 98877 9539 SIVTMLMLML True PC9_epitope_Rep3 1150.61639611686 1150.6147349037901 41.638 3 -1.472076456496416 0.4050869646530765 1.0 ['ENSG00000163527|ENST00000295770|STT3B'] 36012 9573 GVDEPVAAAAA True H1975_Epitope_Rep1 969.4767251144498 969.47562993586 41.745 2 -1.4721384050653692 0.4050939183897701 1.0 ['ENST00000367723.8_1_1:172501854-172502367:+|nuORF'] 67658 8987 LTFKCYYVLFH True H1975_Epitope_Rep3 1432.7213295676002 1432.72022993586 39.564 2 -1.4721686954608044 0.4051008719639058 1.0 ['nc|ENSG00000132950|Q9UJ78-1|ZMYM5', 'ENST00000467542.5_1_13:20411687-20425669:-|nuORF'] 140135 10927 YVRPERLS True PC9_epitope_Rep3 1018.5559784946598 1018.55488993586 47.011 2 -1.472216910104685 0.4051030903735565 1.0 ['ENSG00000141002|ENST00000263346|TCF25', 'ENST00000570116.6_1_16:89971082-89977643:+|nuORF'] 41702 16229 IDLLVSLQNQG True NCI_RA007_Epitope_Rep3 1198.65575210558 1198.65464993586 71.525 2 -1.472263512022965 0.4051030903735565 1.0 ['nc|ENSG00000102908|O94916-2|NFAT5', 'nc|ENSG00000102908|O94916|NFAT5', 'nc|ENSG00000102908|O94916-4|NFAT5', 'ENSG00000102908|ENST00000349945|NFAT5'] 121266 5734 VGGVQGKR True PC9_epitope_Rep2 799.46643521427 799.46532993586 27.446 2 -1.4724512902712885 0.4051100435966665 1.0 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1'] 83895 11217 QEIKIQQPSKH True NCI_RA007_Epitope_Rep2 1334.73064838134 1334.7295499358602 48.217 2 -1.4726566683833913 0.4051261672958474 1.0 ['ENST00000378150.1_1_10:15177331-15210611:-|nuORF'] 86893 17587 QRRRLSGH True NCI_RA007_Epitope_Rep4 1008.5689432201998 1008.56784993586 76.09 2 -1.4727245753091969 0.4051261672958474 1.0 ['CEP170|p.E755Rfs*62|2|0.13|ENSG00000143702|chr1:243165697-243165697|C/-|frameshift_variant'] 117586 10360 VAGPGGLS True H1975_Epitope_Rep1 656.34933977336 656.3487949679301 44.798 1 -1.4727296179249156 0.4051261672958474 1.0 ['ENSG00000162402|ENST00000294383|USP24', 'USP24|p.M899Nfs*19|2|0.32|ENSG00000162402|chr1:55141670-55141671|-/T|frameshift_variant'] 101055 12706 SLTPAERLQT True PC9_epitope_Rep3 1114.59823722946 1114.5971499358602 53.897 2 -1.4727382861233447 0.4051261672958474 1.0 ['nc|ENSG00000160117|Q8NAG6-1|ANKLE1', 'ENSG00000160117|ENST00000404085|ANKLE1', 'ENST00000404085.5_1_19:17392508-17397358:+|nuORF'] 104 18784 AAASKKKP True PC9_epitope_Rep2 799.49158733295 799.49048993586 77.624 2 -1.4728551161017092 0.40513533729138423 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 112410 19428 TNFRFTRFVE True NCI_RA007_Epitope_Rep5 1315.66731984879 1315.6662299358602 81.617 2 -1.4728595696886622 0.40513533729138423 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1'] 89893 24074 RFRHKFQR True NCI_RA007_Epitope_Rep2 1173.6631779582099 1173.66154490379 101.14 3 -1.4729014862142047 0.40513533729138423 1.0 ['ENST00000494624.1_1_X:100872426-100872564:-|nuORF', 'ENST00000361910.8_1_X:100871678-100872564:-|nuORF', 'ENST00000539247.5_1_X:100872276-100872564:-|nuORF'] 16609 10390 EERSGWEL True PC9_epitope_Rep6 1004.4563240230399 1004.45522993586 50.699 2 -1.4729391847960291 0.40515397650908663 1.0 ['ENST00000563969.5_1_16:67312069-67312180:+|nuORF'] 20229 16890 ENVKRLLFC True PC9_epitope_Rep6 1120.60629981536 1120.60520993586 77.484 2 -1.472971401327039 0.40516092840614265 1.0 ['nc|ENSG00000105953|Q02218-2|OGDH', 'ENSG00000105953|ENST00000222673|OGDH'] 12342 7415 DIVRNLGL True PC9_epitope_Rep3 898.5236157372199 898.52250993586 33.528 2 -1.4731527373987578 0.40517483171278984 1.0 ['ENSG00000127954|ENST00000380079|STEAP4'] 36722 10572 GVNGGGGW True NCI_RA007_Epitope_Rep5 702.30853759054 702.3079849679301 47.3 1 -1.4731585302503478 0.40517483171278984 1.0 ['ENST00000003100.12_1_7:91761115-91763805:-|nuORF'] 110441 12468 TINRLFKV True PC9_epitope_Rep2 989.6022004110899 989.60110993586 53.269 2 -1.473238260841277 0.4051770480308519 1.0 ['ENST00000460679.5_3_21:27062258-27066094:+|nuORF'] 24319 11875 FADGLLSK True H1975_Epitope_Rep2 849.4596184983301 849.45852993586 50.756 2 -1.473266655758759 0.4051770480308519 1.0 ['nc|ENSG00000178177|Q8N3X6|LCORL'] 41676 13741 IDKYREVL True PC9_epitope_Rep6 1034.5760452328998 1034.57494993586 64.648 2 -1.4733379155615989 0.4052073716562854 1.0 ['ENST00000480739.2_1_12:58068877-58069030:+|nuORF'] 916 15367 ADRHRPRLLRR True NCI_RA007_Epitope_Rep5 1444.8599802717997 1444.8588899358601 65.816 2 -1.4734292166791452 0.40520958713612937 1.0 ['ENST00000597275.5_1_X:48911128-48919505:+|nuORF'] 48124 3219 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 17.02 3 -1.473459391640008 0.40520958713612937 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 3565 8437 AGNRSQNIKHK True H1975_Epitope_Rep1 1251.6796158679902 1251.6785099358601 37.379 2 -1.47349226571952 0.4052165377334237 1.0 ['ENST00000513954.1_1_10:75008172-75008730:+|nuORF', 'nc|ENSG00000236756|A6NH13|DNAJC9-AS1'] 64739 15383 LRRARRPWA True NCI_RA007_Epitope_Rep4 1180.70537712336 1180.70428993586 66.844 2 -1.4737458956237721 0.4052819164475606 1.0 ['ENST00000455575.1_1_7:86848849-86849557:-|nuORF'] 38394 8341 HGHKGAPP True PC9_epitope_Rep1 799.4089203381499 799.40782993586 36.917 2 -1.4737821204834196 0.40529581546443555 1.0 ['ENST00000372242.7_1_1:45101583-45102057:-|nuORF'] 118265 4381 VCPMEGWI True PC9_epitope_Rep2 933.4088458787699 933.40774993586 22.202 2 -1.4737995507636532 0.40529581546443555 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 347 19574 AAKDQKLSRGH True H1975_Epitope_Rep2 1209.65781779425 1209.65617490379 81.222 3 -1.4738450758661485 0.4053097138316643 1.0 ['ENST00000551650.1_1_12:104238130-104238388:+|nuORF'] 131035 17595 VVLLLDDL True NCI_RA007_Epitope_Rep1 898.53753446586 898.53642993586 72.576 2 -1.4738485304904414 0.4053097138316643 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 62373 23688 LLRPNLFHERK True PC9_epitope_Rep2 1421.82555182569 1421.82444993586 96.589 2 -1.4740834338088749 0.4053586660590552 1.0 ['ENSG00000086288|ENST00000199447|NME8'] 49465 20044 KIVGEEVVRRK True NCI_RA007_Epitope_Rep5 1311.7986683715096 1311.79756993586 84.023 2 -1.4741194144198533 0.4053586660590552 1.0 ['nc|ENSG00000179057|Q8N9C0|IGSF22', 'ENSG00000179057|ENST00000513874|IGSF22'] 133890 14237 WMYVTWFFWFW True H1975_Epitope_Rep1 1697.7529640490498 1697.7518699358602 59.944 2 -1.474379415804158 0.4054193005620275 1.0 ['ENSG00000186908|ENST00000426126|ZDHHC17'] 12104 9874 DIFVGEPSPDL True NCI_RA007_Epitope_Rep2 1187.5710194221099 1187.56992993586 43.034 2 -1.4743847532817775 0.4054193005620275 1.0 ['TECPR1|p.S743G|1|0.33|ENSG00000205356|chr7:98231016-98231016|T/C|missense_variant'] 101106 14089 SLVEFRNL True PC9_epitope_Rep1 976.5341804209199 976.53308993586 59.024 2 -1.474467568714486 0.40542624789680315 1.0 ['nc|ENSG00000185585|Q68BL7-3|OLFML2A', 'nc|ENSG00000185585|Q68BL7-2|OLFML2A', 'ENSG00000185585|ENST00000373580|OLFML2A'] 121249 14914 VGGSGSGK True NCI_RA007_Epitope_Rep5 647.3238533015101 647.3233049679301 64.034 1 -1.4744872116129006 0.40544014207931206 1.0 ['ENSG00000203782|ENST00000368742|LORICRIN', 'nc|ENSG00000131269|O75027-3|ABCB7', 'ENSG00000131269|ENST00000373394|ABCB7', 'nc|ENSG00000131269|O75027-2|ABCB7'] 58634 9148 LFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep1 980.46371818203 980.46262993586 40.094 2 -1.474518976903035 0.40544014207931206 1.0 ['CON__P02769'] 65614 12781 LSGLPDTVFEI True PC9_epitope_Rep4 1189.6230549949698 1189.6219499358601 57.024 2 -1.474564156569075 0.405454035612469 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 30661 9802 GALGRELEP True PC9_epitope_Rep2 940.4977949121999 940.49668993586 43.041 2 -1.4746013756483614 0.405454035612469 1.0 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000104885|ENST00000398665|DOT1L', 'ENST00000482433.1_1_19:2216201-2220604:+|nuORF'] 18452 22963 EKIRQLKKKET True PC9_epitope_Rep4 1399.8510978671898 1399.84945490379 96.546 3 -1.4746101849264464 0.4054609821355548 1.0 ['nc|ENSG00000092853|Q9HAW4-2|CLSPN', 'nc|ENSG00000092853|Q9HAW4-3|CLSPN', 'ENSG00000092853|ENST00000318121|CLSPN'] 29518 25882 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 109.71 3 -1.4746845800751776 0.4054679284963197 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 9245 8594 AVQNQYDLEK True H1975_Epitope_Rep1 1206.5880664685799 1206.58696993586 37.985 2 -1.4746858390896411 0.4054748746947693 1.0 ['nc|ENSG00000166960|Q5BJE1-4|CCDC178'] 88654 19257 RATRKSLLHV True H1975_Epitope_Rep3 1179.72002412799 1179.7189299358602 80.746 2 -1.474694916648312 0.4054770834063533 1.0 ['ENST00000592988.5_1_17:76183451-76198833:+|nuORF', 'ENSG00000183077|ENST00000409257|AFMID', 'nc|ENSG00000183077|Q63HM1-2|AFMID'] 82826 10435 PVSQKRGTI True PC9_epitope_Rep5 984.5716285588 984.57052993586 45.125 2 -1.4747084555086467 0.4054770834063533 1.0 ['ENSG00000198796|ENST00000361673|ALPK2', 'ALPK2|p.I1792Nfs*4|1|0.28|ENSG00000198796|chr18:58529217-58529218|-/T|frameshift_variant', 'ENST00000589204.1_1_18:56196243-56204256:-|nuORF'] 110777 21224 TKLRALKCRQ True PC9_epitope_Rep6 1215.72339525627 1215.72175490379 94.485 3 -1.4747512085449694 0.405484029254387 1.0 ['ENSG00000148143|ENST00000277225|ZNF462', 'nc|ENSG00000148143|Q96JM2-3|ZNF462', 'nc|ENSG00000148143|Q96JM2-2|ZNF462'] 120829 15340 VGDLSAAH True PC9_epitope_Rep3 768.3766171503601 768.37552993586 64.162 2 -1.4748337224346026 0.405490974940125 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2', 'NID2|p.A1169Sfs*8|1|0.21|ENSG00000087303|chr14:52011595-52011599|CCAGC/-|frameshift_variant', 'NID2|p.P437Qfs*22|1|0.37|ENSG00000087303|chr14:52053698-52053698|G/-|frameshift_variant'] 127305 17232 VQLRESGPSL True PC9_epitope_Rep1 1084.58767254576 1084.58656993586 71.101 2 -1.4749142760900216 0.4054931831723074 1.0 ['CON__ENSEMBL:ENSBTAP00000011227', 'CON__ENSEMBL:ENSBTAP00000033053', 'CON__Q1RMK2'] 125912 12066 VNVLLSKVL True PC9_epitope_Rep2 983.63791721347 983.63682993586 51.725 2 -1.4749180603698808 0.4054931831723074 1.0 ['ENST00000303115.7_1_5:35878241-35878331:+|nuORF'] 32411 7616 GGGGYGCA True H1975_Epitope_Rep1 640.2275103885199 640.22696496793 34.283 1 -1.4750270972744233 0.40550707368076727 1.0 ['ENSG00000127528|ENST00000248071|KLF2'] 78250 19445 PARDCREVDP True PC9_epitope_Rep1 1156.5295060466399 1156.52840993586 79.609 2 -1.4750719512977353 0.40550707368076727 1.0 ['ENST00000358625.3_1_9:137023121-137023325:+|nuORF'] 83419 23057 QCEECQCWQH True H1975_Epitope_Rep3 1292.4372625379199 1292.43616993586 96.296 2 -1.4752183471171458 0.405532645646663 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 128781 4767 VSQVITVN True PC9_epitope_Rep4 858.4810822188999 858.47998993586 24.906 2 -1.475237443779811 0.405532645646663 1.0 ['ENST00000429644.6_1_3:81640267-81643094:-|nuORF'] 105784 13273 SVIETHMRQMR True NCI_RA007_Epitope_Rep2 1386.68602377138 1386.68492993586 56.264 2 -1.4753194490416648 0.40556736677335703 1.0 ['ENSG00000172469|ENST00000358812|MANEA'] 34998 26353 GRALWHLRLA True NCI_RA007_Epitope_Rep5 1191.69889476059 1191.6972449037899 108.96 3 -1.4753384306934696 0.40556736677335703 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 17559 17731 EHITSVYL True PC9_epitope_Rep6 960.4916469026 960.49054993586 80.835 2 -1.4754666072415648 0.40556736677335703 1.0 ['nc|ENSG00000198003|A5D8V7-2|ODAD3', 'ENSG00000198003|ENST00000356392|ODAD3'] 137293 19135 YLGKLRAP True NCI_RA007_Epitope_Rep5 916.5494365622399 916.54832993586 80.474 2 -1.4755013972380562 0.40556736677335703 1.0 ['ENSG00000148344|ENST00000340607|PTGES'] 91324 14735 RMHVLRRRWDL True H1975_Epitope_Rep1 1536.8572033904798 1536.85610993586 61.9 2 -1.4755296431537035 0.40556736677335703 1.0 ['nc|ENSG00000171004|Q96MM7|HS6ST2', 'ENSG00000171004|ENST00000370833|HS6ST2'] 12881 23986 DLLPLSLIPV True PC9_epitope_Rep1 1078.66379760814 1078.6627099358602 97.069 2 -1.4756507528912102 0.4055976730874812 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2', 'PAN2|p.R449Qfs*16|1|0.09|ENSG00000135473|chr12:56326327-56326328|-/G|frameshift_variant'] 122571 12286 VGTEWLWK True PC9_epitope_Rep5 1017.5283667644899 1017.52726993586 52.246 2 -1.4757370923425674 0.4056162975422858 1.0 ['ENSG00000277149|ENST00000620995|TYW1B'] 115499 8349 TVGGRCCH True H1975_Epitope_Rep2 831.34797695771 831.34686993586 37.067 2 -1.4757979634710081 0.40562070737747047 1.0 ['ENST00000435835.3_1_16:67405078-67412613:+|nuORF'] 58679 15452 LFICILVP True NCI_RA007_Epitope_Rep5 916.54559705176 916.54448993586 66.134 2 -1.4758098158025446 0.40562070737747047 1.0 ['ENST00000418390.6_1_1:24088355-24088499:+|nuORF'] 95853 12826 SDLNNSTGQSP True NCI_RA007_Epitope_Rep2 1118.48399532286 1118.4828899358602 54.507 2 -1.4758159259649304 0.40562070737747047 1.0 ['nc|ENSG00000075413|P27448-8|MARK3', 'nc|ENSG00000075413|P27448-6|MARK3', 'nc|ENSG00000075413|P27448-3|MARK3', 'nc|ENSG00000075413|P27448-4|MARK3', 'nc|ENSG00000075413|P27448-2|MARK3', 'ENSG00000075413|ENST00000429436|MARK3', 'nc|ENSG00000075413|P27448-7|MARK3', 'MARK3-TDRD9|3|fusion', 'MARK3-TDRD9|2|fusion', 'MARK3-TDRD9|1|fusion', 'ENST00000558953.1_1_14:103932392-103935580:+|nuORF'] 118713 14517 VECYHLKKNM True NCI_RA007_Epitope_Rep2 1263.61039921963 1263.6093099358602 61.131 2 -1.4758160779289455 0.40562070737747047 1.0 ['ENST00000422653.1_1_9:88371036-88385349:+|nuORF'] 11283 11201 DESFANVLK True H1975_Epitope_Rep1 1021.5080252427299 1021.5074749679301 48.053 1 -1.4759058680892077 0.40562765000642426 1.0 ['ERICH3|p.E666A|1|0.37|ENSG00000178965|chr1:74589810-74589810|T/G|missense_variant'] 7713 10679 ASRCKNGG True H1975_Epitope_Rep3 791.3708205772699 791.3702749679301 46.151 1 -1.4759315041365844 0.4056320590536926 1.0 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'ENSG00000169876|ENST00000306151|MUC17'] 27540 4609 FPHFDLSHG True PC9_epitope_Rep3 1055.48247920123 1055.48138993586 22.824 2 -1.4759942677976112 0.4056320590536926 1.0 ['ENSG00000206172|ENST00000320868|HBA1', 'ENSG00000188536|ENST00000251595|HBA2', 'ENST00000487791.1_1_16:226802-227261:+|nuORF', 'CON__P01966'] 23430 9416 EVVSPVLSSR True NCI_RA007_Epitope_Rep5 1071.59242357303 1071.5913299358601 42.857 2 -1.4760500419897837 0.4056320590536926 1.0 ['ENST00000496336.1_1_7:65540843-65547929:+|nuORF'] 123610 21305 VIKTPVVK True H1975_Epitope_Rep2 882.5902387450599 882.58914993586 88.162 2 -1.4760901092991108 0.4056320590536926 1.0 ['nc|ENSG00000133422|Q9Y6X9-2|MORC2', 'ENSG00000133422|ENST00000397641|MORC2'] 131613 16906 VVYHRGRY True PC9_epitope_Rep4 1048.5566472009998 1048.5555499358602 73.012 2 -1.4761679047269167 0.40563426342283837 1.0 ['nc|ENSG00000110090|P50416-2|CPT1A', 'ENSG00000110090|ENST00000265641|CPT1A'] 90965 24950 RLHLLLLILL True PC9_epitope_Rep3 1215.84309938279 1215.8414549037902 101.33 3 -1.4762213121819856 0.40563426342283837 1.0 ['nc|ENSG00000206034|Q30KR1|DEFB109B'] 129267 11115 VTDPTGFLRM-[Oxidation] True H1975_Epitope_Rep2 1151.5644949534699 1151.5633899358602 47.79 2 -1.4763357550126532 0.40566456435412285 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 19434 15281 ELPPALGPC True NCI_RA007_Epitope_Rep3 895.44733956247 895.44679496793 67.655 1 -1.4763752961576977 0.4056667678867581 1.0 ['ENST00000553365.5_1_14:20835061-20835109:-|nuORF'] 100308 9589 SLLWTDLSPPP True NCI_RA007_Epitope_Rep2 1224.63903941228 1224.6379499358602 41.914 2 -1.4763954102694905 0.4056667678867581 1.0 ['nc|ENSG00000078246|O75386-2|TULP3', 'ITFG2-TULP3|2|fusion', 'ENST00000448120.6_1_12:3049550-3049889:+|nuORF'] 21545 15325 ERRYRERKLQY True H1975_Epitope_Rep3 1595.8644565155496 1595.86334993586 64.357 2 -1.476556498478488 0.40572736615902083 1.0 ['ENSG00000126870|ENST00000407559|DYNC2I1', 'DYNC2I1|p.L508Ffs*8|2|0.37|ENSG00000126870|chr7:158911610-158911611|-/T|frameshift_variant', 'DYNC2I1|p.N527Ifs*23|1|0.41|ENSG00000126870|chr7:158911662-158911662|A/-|frameshift_variant'] 28574 7758 FSNLSWWNQV True H1975_Epitope_Rep1 1279.59857158263 1279.59746993586 34.799 2 -1.4765647487687454 0.40572736615902083 1.0 ['ENST00000511466.5_1_4:145916712-146017251:-|nuORF'] 120830 15804 VGDLSAAH True PC9_epitope_Rep3 768.3766171503601 768.37552993586 65.944 2 -1.4767550401921308 0.4057434484047274 1.0 ['nc|ENSG00000087303|Q14112-2|NID2', 'ENSG00000087303|ENST00000216286|NID2', 'NID2|p.A1169Sfs*8|1|0.21|ENSG00000087303|chr14:52011595-52011599|CCAGC/-|frameshift_variant', 'NID2|p.P437Qfs*22|1|0.37|ENSG00000087303|chr14:52053698-52053698|G/-|frameshift_variant'] 82881 22393 PVVTTAAHW True PC9_epitope_Rep5 980.50796567308 980.50686993586 91.137 2 -1.4768499052914599 0.4057434484047274 1.0 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 40192 15787 HRFWYNYRQRK True H1975_Epitope_Rep3 1652.84366150132 1652.8425699358602 66.172 2 -1.4768701049140602 0.4057434484047274 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 126103 12217 VPEALRAEVW True PC9_epitope_Rep2 1168.6240580544797 1168.62296993586 52.306 2 -1.4769057947789497 0.4057434484047274 1.0 ['ENSG00000152061|ENST00000681986|RABGAP1L', 'nc|ENSG00000152061|Q5R372-4|RABGAP1L', 'nc|ENSG00000152061|Q5R372|RABGAP1L', 'nc|ENSG00000152061|Q5R372-3|RABGAP1L', 'nc|ENSG00000152061|Q5R372-2|RABGAP1L'] 126654 5637 VPQSIANSL True PC9_epitope_Rep2 927.50254593947 927.50144993586 27.067 2 -1.4770145341070646 0.4057573280392386 1.0 ['ENSG00000204695|ENST00000641895|OR14J1'] 34039 23230 GNPHKTSA True H1975_Epitope_Rep2 810.3984152241001 810.39730993586 95.818 2 -1.477014766835692 0.4057573280392386 1.0 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000545752.1_1_12:122399919-122407612:+|nuORF'] 82854 7635 PVTLRWYLAM True NCI_RA007_Epitope_Rep2 1248.66890007192 1248.66780993586 34.323 2 -1.4770338565520482 0.4057642676133643 1.0 ['DSCAM|p.T62M|1|0.09|ENSG00000171587|chr21:40708630-40708630|G/A|missense_variant'] 72668 24481 MYAGAYSCR True H1975_Epitope_Rep2 1020.41572216436 1020.41462993586 100.71 2 -1.4771132300720071 0.40580624065769805 1.0 ['ENST00000547801.1_1_12:60098582-60161916:+|nuORF'] 98299 19990 SIFRVPFP True PC9_epitope_Rep2 961.5385375253699 961.53744993586 82.295 2 -1.4773139213466804 0.40583653498067335 1.0 ['ENST00000540458.5_1_12:6956081-6956183:+|nuORF'] 48634 8344 KEITEGDEVEV True PC9_epitope_Rep3 1246.5928770655 1246.59178993586 37.065 2 -1.4774393966124588 0.4058737665674082 1.0 ['TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion'] 125071 26672 VLPGKKKKKT True NCI_RA007_Epitope_Rep1 1125.75976368165 1125.75811490379 110.51 3 -1.4774440921048675 0.4058737665674082 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 39021 12640 HKIKGLKN True NCI_RA007_Epitope_Rep2 936.58688470012 936.58578993586 53.78 2 -1.4777674228752369 0.4059040590405904 1.0 ['ENSG00000157578|ENST00000288350|LCA5L'] 111966 20377 TLSFCRTNF True PC9_epitope_Rep3 1087.51206507735 1087.5109699358602 83.631 2 -1.4778719977610464 0.4059109964151009 1.0 ['ENSG00000186886|ENST00000641440|OR5D3P'] 19347 10246 ELNFRVLD True PC9_epitope_Rep1 1004.5290950404799 1004.52798993586 44.293 2 -1.478052037036883 0.40592926450497996 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 70226 12506 LYLRELPEPV True PC9_epitope_Rep2 1227.68632395787 1227.68467490379 53.413 3 -1.4780897689588606 0.40592926450497996 1.0 ['nc|ENSG00000138639|Q8N264-3|ARHGAP24', 'nc|ENSG00000138639|Q8N264-2|ARHGAP24', 'ENSG00000138639|ENST00000395184|ARHGAP24', 'nc|ENSG00000138639|Q8N264-4|ARHGAP24', 'nc|ENSG00000128805|Q7Z5H3-3|ARHGAP22', 'ENSG00000128805|ENST00000249601|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-5|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-2|ARHGAP22'] 134248 22227 WRRRQRRR True PC9_epitope_Rep4 1268.7551212804399 1268.7540299358602 93.735 2 -1.4781317268381906 0.40592926450497996 1.0 ['ENST00000370332.5_1_1:92949124-92949509:-|nuORF'] 1529 7207 AEERGRHA True H1975_Epitope_Rep2 924.4525760552798 924.45146993586 32.656 2 -1.4781688802798396 0.40592926450497996 1.0 ['nc|ENSG00000160469|Q8TDC3-2|BRSK1'] 100594 10243 SLQGWWALLTW True H1975_Epitope_Rep3 1359.6975573479099 1359.69646993586 44.447 2 -1.4781711391299883 0.40592926450497996 1.0 ['ENST00000535597.1_11:69063371-69063575:+|nuORF'] 13332 17949 DMEKCSKDLAH True PC9_epitope_Rep5 1275.5587575695902 1275.5576499358601 74.057 2 -1.4781879750262763 0.40592926450497996 1.0 ['nc|ENSG00000070882|Q9H4L5-8|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-7|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-6|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-5|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-4|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-3|OSBPL3', 'nc|ENSG00000070882|Q9H4L5-2|OSBPL3', 'ENSG00000070882|ENST00000313367|OSBPL3'] 98382 18717 SIHSAIYSI True PC9_epitope_Rep4 989.51819600361 989.51708993586 80.074 2 -1.478210374448335 0.4059314612645222 1.0 ['NBEA|p.H494Y|1|0.44|ENSG00000172915|chr13:35070761-35070761|C/T|missense_variant'] 122385 10491 VGSFVGSG True NCI_RA007_Epitope_Rep5 708.3442543929199 708.3437049679301 46.985 1 -1.4782237931373694 0.4059314612645222 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 46697 24480 ITWYPLFWIKL True H1975_Epitope_Rep1 1478.8325942687395 1478.8314899358602 101.46 2 -1.4784578265105845 0.40595700958585823 1.0 ['ENST00000358812.8_1_6:96044648-96044717:+|nuORF'] 12487 2617 DKYNKTTQR True NCI_RA007_Epitope_Rep3 1152.58873517492 1152.5876299358601 14.756 2 -1.478467368479244 0.40595700958585823 1.0 ['ENSG00000134516|ENST00000520908|DOCK2'] 19099 15349 ELHRQERLRNH True NCI_RA007_Epitope_Rep4 1486.78654054802 1486.78544993586 66.708 2 -1.4786264205722799 0.4059825567140305 1.0 ['nc|ENSG00000165861|Q9HBF4-3|ZFYVE1', 'ENSG00000165861|ENST00000556143|ZFYVE1'] 33959 6403 GNDCPHKKSA True PC9_epitope_Rep1 1055.48182757823 1055.4807299358602 29.437 2 -1.4786628363289773 0.4059825567140305 1.0 ['ENSG00000129226|ENST00000250092|CD68', 'ENST00000581621.1_1_17:7483060-7484826:+|nuORF'] 120048 11964 VFEVFFLLL True PC9_epitope_Rep1 1125.6474192680098 1125.64576490379 50.885 3 -1.4787848665789123 0.40603619381202566 1.0 ['ENST00000595222.5_1_19:56880178-56884554:+|nuORF'] 73312 15813 NELDRYHRIIE True PC9_epitope_Rep2 1456.7422756941999 1456.7411699358602 66.086 2 -1.4788225303342788 0.4060500630458133 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 1075 8308 AEAMADKA True PC9_epitope_Rep3 805.3640038613299 805.36290993586 36.929 2 -1.4788242762168233 0.4060500630458133 1.0 ['ENSG00000100401|ENST00000356244|RANGAP1'] 61505 9798 LLFTEEEM True H1975_Epitope_Rep1 1010.4630491962599 1010.46194993586 42.615 2 -1.478922728025955 0.4060569974198218 1.0 ['ENST00000473040.6_1_4:128905516-128956965:+|nuORF'] 54465 15090 LAAAPRLAL True PC9_epitope_Rep4 894.5650866263799 894.56398993586 65.977 2 -1.4789795588344712 0.40605919094040044 1.0 ['ENSG00000268041|ENST00000597630|ERFL'] 40531 12805 HSPLLQPGLA True PC9_epitope_Rep5 1031.5763795860698 1031.5752899358602 54.265 2 -1.479009091296616 0.40605919094040044 1.0 ['ENSG00000137561|ENST00000260116|TTPA'] 121083 13140 VGGADDNLRI True H1975_Epitope_Rep1 1028.5250722892 1028.5239699358601 55.635 2 -1.47915930885627 0.40607779957037454 1.0 ['nc|ENSG00000114982|Q9P2N6-8|KANSL3', 'ENST00000487070.5_1_2:97267510-97285240:-|nuORF', 'ENST00000597150.5_1_2:97261350-97297069:-|nuORF', 'nc|ENSG00000114982|Q9P2N6-6|KANSL3', 'ENST00000447759.5_3_2:97261350-97293793:-|nuORF', 'nc|ENSG00000114982|Q9P2N6-2|KANSL3', 'nc|ENSG00000114982|Q9P2N6-5|KANSL3', 'nc|ENSG00000114982|Q9P2N6-4|KANSL3', 'ENSG00000114982|ENST00000431828|KANSL3', 'nc|ENSG00000114982|Q9P2N6|KANSL3'] 66629 16332 LSSQIKRVLM True PC9_epitope_Rep4 1173.69036379249 1173.68926993586 70.784 2 -1.4792040439417287 0.406079992528427 1.0 ['ENST00000546023.1_1_6:160209518-160209776:-|nuORF'] 133663 18666 WKSCRGGGRRR True NCI_RA007_Epitope_Rep3 1317.6948890926496 1317.69325490379 81.66 3 -1.4792139764351517 0.406079992528427 1.0 ['ENST00000519148.5_1_8:144413480-144442081:-|nuORF'] 120806 15419 VGDFARDL True PC9_epitope_Rep5 891.4450310633499 891.44392993586 64.319 2 -1.4792399058586732 0.40608657078819577 1.0 ['ENSG00000206181|ENST00000332567|ELOA2'] 49111 4606 KGDTVAWHML True H1975_Epitope_Rep3 1156.56991430664 1156.5688099358601 22.839 2 -1.4792874132686173 0.40608657078819577 1.0 ['HEPH|p.L646M|1|0.32|ENSG00000089472|chrX:66200611-66200611|C/A|missense_variant'] 45950 12132 ISSLALSFYI True PC9_epitope_Rep4 1112.61176203528 1112.6106699358602 54.476 2 -1.4793612570020973 0.40608657078819577 1.0 ['ENST00000485159.5_1_9:82188246-82242462:+|nuORF'] 53133 17130 KSKTLLHL True PC9_epitope_Rep2 938.5913013742199 938.59020993586 71.139 2 -1.4794239811861654 0.40608657078819577 1.0 ['ENST00000537403.5_1_14:39524417-39524492:-|nuORF'] 117830 9532 VAPAHAPLGR True PC9_epitope_Rep5 987.5613982282699 987.56030993586 41.623 2 -1.4794300265998352 0.40608657078819577 1.0 ['ENST00000556818.1_1_14:64970443-64970746:+|nuORF'] 59346 10481 LGKKILLEL True NCI_RA007_Epitope_Rep2 1025.6848674058897 1025.68376993586 45.362 2 -1.4794499226819584 0.40608657078819577 1.0 ['ENST00000520664.1_1_5:159845973-159846060:-|nuORF'] 137011 13686 YKLKKEKE True PC9_epitope_Rep3 1064.62299542532 1064.62188993586 57.716 2 -1.4794770152659258 0.4060935037646647 1.0 ['nc|ENSG00000112640|Q14738-3|PPP2R5D', 'nc|ENSG00000112640|Q14738-2|PPP2R5D', 'ENSG00000112640|ENST00000485511|PPP2R5D', 'PPP2R5D|p.Q79Rfs*28|1|0.4|ENSG00000112640|chr6:43006589-43006589|C/-|frameshift_variant'] 86872 20880 QRRALHKRW True PC9_epitope_Rep6 1249.72684084393 1249.7257499358602 93.088 2 -1.4795543735795762 0.40610736923202634 1.0 ['ENST00000568754.5_2_16:30664323-30664383:+|nuORF'] 67060 13505 LTATSIDRL True PC9_epitope_Rep1 988.55530978832 988.55420993586 56.802 2 -1.4795848288616247 0.40610736923202634 1.0 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 3209 15160 AGESQIFPAVL True PC9_epitope_Rep5 1130.5971746003 1130.5960699358602 63.32 2 -1.479654966105095 0.4061234256632933 1.0 ['ENST00000449075.1_1_2:118940771-118943830:-|nuORF'] 19011 19054 ELGHVVGFWHE True NCI_RA007_Epitope_Rep5 1308.6251206836398 1308.6234749037899 80.154 3 -1.4796839814839584 0.4061234256632933 1.0 ['MED20-TLL2|1|fusion', 'ENSG00000095587|ENST00000357947|TLL2', 'ENST00000518656.5_1_8:22034120-22035374:+|nuORF', 'nc|ENSG00000168487|P13497-3|BMP1', 'TLL2|p.L355Cfs*37|2|0.47|ENSG00000095587|chr10:96410460-96410460|G/-|frameshift_variant', 'ENST00000518913.5_1_8:22034120-22058713:+|nuORF', 'nc|ENSG00000168487|P13497-4|BMP1', 'nc|ENSG00000168487|P13497-5|BMP1', 'nc|ENSG00000168487|P13497-2|BMP1', 'nc|ENSG00000168487|P13497-6|BMP1', 'ENST00000520982.5_1_8:22034120-22069238:+|nuORF', 'ENSG00000168487|ENST00000306385|BMP1'] 85477 18499 QLHRRKVIS True NCI_RA007_Epitope_Rep4 1135.69380938015 1135.6921649037902 80.068 3 -1.4797164509223277 0.4061234256632933 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 85258 23434 QKNLEKIRDCA True PC9_epitope_Rep2 1316.6870693172 1316.6854349037899 95.613 3 -1.4797806321814206 0.4061234256632933 1.0 ['nc|ENSG00000151687|Q7Z5J8-3|ANKAR', 'nc|ENSG00000151687|Q7Z5J8-2|ANKAR', 'ENSG00000151687|ENST00000684021|ANKAR', 'nc|ENSG00000151687|Q7Z5J8-4|ANKAR'] 73323 7252 NELFEVREK True H1975_Epitope_Rep3 1162.59823722946 1162.5971499358602 32.867 2 -1.479795722801836 0.40612490225599013 1.0 ['ENSG00000136935|ENST00000373555|GOLGA1', 'ENST00000475407.5_2_9:127642811-127683993:-|nuORF'] 20355 9051 EPGSWPERP True NCI_RA007_Epitope_Rep4 1053.48795850449 1053.48686993586 41.648 2 -1.4798890500092852 0.40612490225599013 1.0 ['nc|ENSG00000197951|Q9NQZ8|ZNF71', 'ENSG00000197951|ENST00000599599|ZNF71'] 93662 6836 RTFWYWNYNYY True NCI_RA007_Epitope_Rep1 1674.7255630008997 1674.72391490379 30.596 3 -1.4799206034216776 0.40612490225599013 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 128962 13951 VSVNTWTP True PC9_epitope_Rep6 902.44978209062 902.44868993586 65.514 2 -1.4799501817352316 0.40612490225599013 1.0 ['ENST00000244051.2_1_20:49576777-49576906:+|nuORF'] 59580 19412 LGRRKKTG True H1975_Epitope_Rep1 914.5773826455799 914.57628993586 80.848 2 -1.4799715140916043 0.40612490225599013 1.0 ['ENST00000261177.9_1_12:31147823-31148003:+|nuORF'] 44143 18228 ILPKNFVI True PC9_epitope_Rep4 942.5902387450599 942.58914993586 78.185 2 -1.4800075171650755 0.40612490225599013 1.0 ['ENSG00000183354|ENST00000399933|KIAA2026', 'ENST00000540714.1_1_9:5919686-5933837:-|nuORF'] 64397 22311 LQQSSRNR True NCI_RA007_Epitope_Rep1 987.52098996827 987.5204449679301 91.4 1 -1.4801043277252206 0.40612490225599013 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 93916 16928 RVIKSCKFLE True H1975_Epitope_Rep3 1221.69036379249 1221.68872490379 70.688 3 -1.480166823540484 0.40612490225599013 1.0 ['ENST00000570827.6_1_17:9548127-9548559:+|nuORF'] 110678 8298 TIWVNCHVS True PC9_epitope_Rep5 1057.5015003936498 1057.50040993586 36.857 2 -1.48026437086431 0.40612490225599013 1.0 ['ENSG00000255009|ENST00000530464|UBTFL1'] 98559 5763 SILTAVADEEP True NCI_RA007_Epitope_Rep1 1143.56593404167 1143.5648299358602 26.472 2 -1.48027375354137 0.40612490225599013 1.0 ['ENST00000581133.5_1_17:26906381-26907081:-|nuORF', 'ENSG00000076382|ENST00000321765|SPAG5'] 83989 6419 QELVDTEK True H1975_Epitope_Rep3 960.47639076128 960.47584496793 29.667 1 -1.480351695865078 0.40612490225599013 1.0 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2', 'nc|ENSG00000146426|Q8IVF5-3|TIAM2', 'ENST00000546145.1_1_6:155561684-155565944:+|nuORF'] 65574 14158 LSGGVFRIFKA True PC9_epitope_Rep1 1193.69207804465 1193.6909899358602 59.281 2 -1.480357051749414 0.40612490225599013 1.0 ['chr7:50504059-50513259|115|12.32|0.0|20.23|-|2|TE_info:L1PB1,L1PB1_dup5738,L1,LINE,donor,+,50513259,50517927|DDC,None|6'] 94349 4005 RWYWCRDSTTR True PC9_epitope_Rep1 1528.6993653363998 1528.69771490379 20.309 3 -1.480458424020427 0.4061456947459328 1.0 ['ENST00000399627.3_1_22:50905837-50906184:-|nuORF'] 129827 19414 VTLGPRFLGAG True PC9_epitope_Rep5 1086.61857875122 1086.61748993586 79.724 2 -1.4805201742857457 0.4061456947459328 1.0 ['ENST00000429687.7_1_14:20811743-20811776:+|nuORF'] 30928 20620 GASGFTGQ True H1975_Epitope_Rep1 723.3187679210698 723.3182149679301 85.732 1 -1.480525325576863 0.4061456947459328 1.0 ['ENSG00000143653|ENST00000366510|SCCPDH'] 95677 7987 SAVVPLASVS True PC9_epitope_Rep4 928.52294703088 928.52184993586 38.169 2 -1.4805684652147943 0.4061478853515078 1.0 ['ENSG00000131482|ENST00000253801|G6PC1'] 34299 5876 GPPGPASLG True NCI_RA007_Epitope_Rep4 751.38645355807 751.38534993586 29.226 2 -1.480604184010594 0.4061478853515078 1.0 ['ENSG00000116017|ENST00000263620|ARID3A'] 135300 19009 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 79.975 2 -1.4807293232203544 0.4061617458279846 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 79575 7559 PGTKVQHCHY True H1975_Epitope_Rep1 1168.54476218796 1168.5436699358602 34.069 2 -1.4807645734341917 0.4061617458279846 1.0 ['ENST00000577083.1_1_16:4491378-4492529:+|nuORF', 'nc|ENSG00000103423|Q96EY1-3|DNAJA3', 'ENSG00000103423|ENST00000262375|DNAJA3', 'nc|ENSG00000103423|Q96EY1-2|DNAJA3'] 61475 19859 LLFKHMCY True PC9_epitope_Rep4 1053.51397965365 1053.5128899358601 84.518 2 -1.4807778754555716 0.4061639359566821 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 49112 5112 KGDTVAWHML True NCI_RA007_Epitope_Rep1 1156.56991430664 1156.5688099358601 23.969 2 -1.4807856129137904 0.4061639359566821 1.0 ['HEPH|p.L646M|1|0.32|ENSG00000089472|chrX:66200611-66200611|C/A|missense_variant'] 34107 22735 GPALKASSS True PC9_epitope_Rep5 816.43413202648 816.4335849679301 92.455 1 -1.4808751053016134 0.40616612598314933 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'PI4KA|p.K754N|1|0.22|ENSG00000241973|chr22:20796161-20796161|C/A|missense_variant'] 38917 22206 HIMKYKKK True PC9_epitope_Rep4 1074.6372060208198 1074.63667496793 93.659 1 -1.4808975441564622 0.40616612598314933 1.0 ['nc|ENSG00000056736|Q9NRM6-2|IL17RB', 'ENST00000475124.1_1_3:53880615-53891834:+|nuORF', 'ENSG00000056736|ENST00000288167|IL17RB'] 85476 17926 QLHRRKVIS True NCI_RA007_Epitope_Rep3 1135.69380938015 1135.6921649037902 78.546 3 -1.4811276538392344 0.4061916542195668 1.0 ['ENSG00000125633|ENST00000376300|CCDC93', 'ENST00000460781.1_1_2:118709253-118753033:-|nuORF'] 42991 9134 IGDSRISL True PC9_epitope_Rep4 859.4763311916299 859.4752299358599 42.725 2 -1.4811312545035924 0.4061916542195668 1.0 ['nc|ENSG00000144395|Q8NCX0-2|CCDC150'] 134132 20409 WREFPDRLVGY True H1975_Epitope_Rep1 1436.72008369764 1436.71898993586 84.88 2 -1.481178209201533 0.4061985833809818 1.0 ['ENSG00000151348|ENST00000533608|EXT2', 'nc|ENSG00000151348|Q93063-2|EXT2', 'nc|ENSG00000151348|Q93063-3|EXT2', 'ENST00000528159.1_1_11:44228449-44265767:+|nuORF'] 72963 21930 NCLMRLILK True PC9_epitope_Rep6 1102.63549176866 1102.63438993586 97.26 2 -1.481289598791994 0.4062029614590261 1.0 ['SERPINA10|p.K219Nfs*12|1|0.3|ENSG00000140093|chr14:94289943-94289943|A/-|frameshift_variant'] 28650 7654 FSSGPQLT True H1975_Epitope_Rep3 835.40758292547 835.40703496793 34.424 1 -1.481390461390217 0.4062029614590261 1.0 ['ENSG00000107771|ENST00000372088|CCSER2', 'ENST00000224756.12_1_10:86230212-86274020:+|nuORF'] 20912 7714 EQTLDRFLVE True H1975_Epitope_Rep1 1248.6350166609998 1248.6339099358602 34.634 2 -1.4814125838463266 0.4062029614590261 1.0 ['ENST00000578237.5_1_17:15586405-15587608:-|nuORF'] 35366 10897 GTASATKVSDF True H1975_Epitope_Rep2 1082.5244035828598 1082.5233099358602 46.945 2 -1.4814255614162464 0.4062029614590261 1.0 ['ENST00000515160.5_1_5:95998126-96031662:+|nuORF'] 71439 13859 MIRGCGGG True PC9_epitope_Rep5 749.3312642644099 749.33016993586 58.329 2 -1.4814472378220602 0.40620478835114576 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 129268 11211 VTDPTGFLRM-[Oxidation] True H1975_Epitope_Rep2 1151.5644949534699 1151.5633899358602 48.164 2 -1.4814957201144758 0.40620478835114576 1.0 ['ENSG00000100154|ENST00000397906|TTC28'] 41410 5367 IASDGSIPV True PC9_epitope_Rep4 857.44944773745 857.44834993586 27.365 2 -1.481610006635711 0.40620478835114576 1.0 ['ENSG00000051382|ENST00000674063|PIK3CB', 'PIK3CB-BFSP2|1|fusion', 'PIK3CB|p.T38Lfs*46|1|0.12|ENSG00000051382|chr3:138759233-138759233|G/-|frameshift_variant'] 81689 6346 PRTFEGIDP True NCI_RA007_Epitope_Rep1 1030.5083595958997 1030.5072699358602 28.71 2 -1.4816183396458533 0.40620478835114576 1.0 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 103224 15556 SQRQLYQFSFW True NCI_RA007_Epitope_Rep2 1488.7149983171998 1488.71390993586 65.216 2 -1.4816760174326793 0.40620478835114576 1.0 ['ENST00000399410.7_1_16:16235562-16235850:+|nuORF'] 90247 5581 RHQDISKAFT True NCI_RA007_Epitope_Rep1 1201.6203696563698 1201.61926993586 25.775 2 -1.4816981143339134 0.40620478835114576 1.0 ['nc|ENSG00000186976|Q5THR3-3|EFCAB6', 'nc|ENSG00000186976|Q5THR3-5|EFCAB6', 'nc|ENSG00000186976|Q5THR3-2|EFCAB6', 'ENSG00000186976|ENST00000262726|EFCAB6'] 73082 10236 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 44.379 1 -1.481722543830339 0.40620478835114576 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 35838 12958 GVAAAGHA True NCI_RA007_Epitope_Rep5 652.3292730351201 652.32872496793 56.523 1 -1.4818479795539543 0.40624671854764377 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 38334 7536 HFYKDFSKREL True NCI_RA007_Epitope_Rep2 1468.7462984454799 1468.7446649037902 33.939 3 -1.4819062282912672 0.40624854169583274 1.0 ['ENST00000354577.8_1_6:131911469-131911529:-|nuORF'] 66665 5798 LSSSVSRAP True PC9_epitope_Rep2 902.48214484806 902.48104993586 27.694 2 -1.4819548980968142 0.40624854169583274 1.0 ['nc|ENSG00000099904|Q9ULC8-2|ZDHHC8', 'ENSG00000099904|ENST00000334554|ZDHHC8', 'nc|ENSG00000099904|Q9ULC8-3|ZDHHC8'] 84146 12687 QERDRKFL True PC9_epitope_Rep2 1090.5883412520998 1090.5872499358602 54.108 2 -1.481962743743349 0.40624854169583274 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 80076 22326 PKGMPKGTRLG True PC9_epitope_Rep4 1140.6437479532399 1140.6426499358602 94.115 2 -1.4819766450312017 0.40624854169583274 1.0 ['ENST00000589123.5_2_19:3467374-3467728:+|nuORF'] 69502 10299 LVSHFNFIL True PC9_epitope_Rep2 1088.60186605792 1088.6007699358602 44.944 2 -1.4819976933047434 0.40624854169583274 1.0 ['ENST00000502271.5_1_5:53182250-53182346:-|nuORF'] 18344 13398 EIWETTDRLC True H1975_Epitope_Rep2 1264.57578753272 1264.57414490379 56.67 3 -1.4820039272574492 0.40624854169583274 1.0 ['ENST00000588232.5_3_12:53937213-54020121:-|nuORF'] 62274 18809 LLQKLRAK True H1975_Epitope_Rep2 968.6494849566799 968.64838993586 78.103 2 -1.482024896504526 0.40624854169583274 1.0 ['ENSG00000131788|ENST00000393045|PIAS3', 'ENST00000369299.7_1_1:145580513-145580615:+|nuORF'] 49306 20612 KHRQQRRKDP True NCI_RA007_Epitope_Rep2 1347.7595975241898 1347.75850993586 85.253 2 -1.4820710072741543 0.4062507291350708 1.0 ['ENST00000494993.1_1_15:91475575-91475770:-|nuORF', 'nc|ENSG00000184508|Q8N4P3-2|HDDC3', 'ENSG00000184508|ENST00000394272|HDDC3'] 95132 16482 RYYADIRQTVP True PC9_epitope_Rep2 1380.7149983171998 1380.71390993586 68.639 2 -1.4820826425527402 0.4062507291350708 1.0 ['nc|ENSG00000164050|O43157-2|PLXNB1', 'ENSG00000164050|ENST00000296440|PLXNB1', 'ENST00000485535.5_1_3:48445895-48454598:-|nuORF'] 49472 24438 KIWEFLNKMRI True PC9_epitope_Rep2 1476.82752597164 1476.82588490379 99.575 3 -1.4821776912111166 0.4062736955076234 1.0 ['MAGEB3|p.R245Qfs*12|1|0.47|ENSG00000198798|chrX:30236653-30236654|-/C|frameshift_variant', 'ENSG00000198798|ENST00000361644|MAGEB3'] 36118 7171 GVEMQPWEI True PC9_epitope_Rep5 1087.50083168731 1087.4997299358602 32.55 2 -1.4822170125676768 0.4062736955076234 1.0 ['ENST00000379484.9_1_X:21901709-21902018:+|nuORF'] 58126 6383 LESASSPFSA True H1975_Epitope_Rep2 994.46074069714 994.4596499358599 29.478 2 -1.4822631162544015 0.4062736955076234 1.0 ['nc|ENSG00000115459|Q96FG2-6|ELMOD3'] 83561 4449 QDRLLIPRWR True NCI_RA007_Epitope_Rep1 1351.7836870137098 1351.78204490379 21.415 3 -1.482269502245834 0.4062736955076234 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 16338 12383 EEKKIRTL True PC9_epitope_Rep4 1015.6025943339099 1015.60148993586 55.436 2 -1.4822939727088178 0.4062736955076234 1.0 ['ENST00000528308.1_1_11:7507082-7509735:+|nuORF', 'ENSG00000183801|ENST00000329293|OLFML1'] 3851 6188 AHAKHGSRDGS True H1975_Epitope_Rep2 1121.53261728113 1121.53207496793 28.774 1 -1.4823119362239192 0.4062755161553715 1.0 ['nc|ENSG00000114019|Q9Y2J4-3|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4|AMOTL2', 'ENSG00000114019|ENST00000249883|AMOTL2', 'nc|ENSG00000114019|Q9Y2J4-4|AMOTL2', 'ENST00000506326.1_1_3:134076549-134085275:-|nuORF'] 72468 21137 MVAACLLLFLE True NCI_RA007_Epitope_Rep5 1221.6501387732899 1221.6484949037902 88.325 3 -1.4823528960691532 0.4062755161553715 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000478085.5_1_22:40800171-40802852:+|nuORF'] 122003 4576 VGQGLGQV True NCI_RA007_Epitope_Rep3 756.41300265908 756.41190993586 24.886 2 -1.4824599403778878 0.4062755161553715 1.0 ['ENST00000256367.2_1_14:71138606-71138684:+|nuORF'] 132811 9610 VYSSGSERHL True PC9_epitope_Rep1 1133.5465360097699 1133.54542993586 41.821 2 -1.4824628944965248 0.4062755161553715 1.0 ['ENST00000510365.5_1_4:8376552-8417570:-|nuORF', 'nc|ENSG00000087008|O15254-2|ACOX3', 'ENSG00000087008|ENST00000356406|ACOX3'] 55813 9555 LDELSLFGP True NCI_RA007_Epitope_Rep2 989.5069626135698 989.50586993586 41.781 2 -1.482463209347426 0.4062755161553715 1.0 ['ENSG00000115165|ENST00000264192|CYTIP', 'nc|ENSG00000115165|O60759-2|CYTIP'] 25567 5363 FESKVSASE True NCI_RA007_Epitope_Rep4 982.46074069714 982.4596499358599 27.196 2 -1.4825781400275206 0.4062755161553715 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant', 'SFT2D2-C1orf9|2|fusion', 'nc|ENSG00000094975|Q9UBS9-2|SUCO', 'ENST00000608804.1_1_1:172525038-172539871:+|nuORF'] 67733 5270 LTGPAICH True PC9_epitope_Rep2 810.40580910366 810.40470993586 25.658 2 -1.4825987059350942 0.4062755161553715 1.0 ['ENST00000468655.1_1_19:49994004-49994437:+|nuORF'] 124657 16065 VLIHHRDI True PC9_epitope_Rep3 1001.5770482924099 1001.57594993586 66.945 2 -1.4827028597285037 0.4062824415905565 1.0 ['ENSG00000172461|ENST00000302103|FUT9', 'FUT9|p.W115L|1|0.34|ENSG00000172461|chr6:96203499-96203499|G/T|missense_variant'] 101072 13946 SLTRWPDGRNF True PC9_epitope_Rep5 1347.6683824779495 1347.66728993586 58.665 2 -1.4827840798892595 0.40629155294282315 1.0 ['ENSG00000100341|ENST00000216177|PNPLA5'] 137248 21245 YLFKRFIF True PC9_epitope_Rep4 1132.64333694708 1132.64222993586 89.884 2 -1.4828026621112773 0.40629155294282315 1.0 ['ENST00000433529.6_1_2:70439571-70439754:-|nuORF'] 76027 19188 NRKLIYNFK True NCI_RA007_Epitope_Rep4 1194.6873270173799 1194.68569490379 82.959 3 -1.4828094108551648 0.40629155294282315 1.0 ['ENST00000453770.1_1_20:1514156-1534896:-|nuORF', 'ENSG00000125900|ENST00000381623|SIRPD'] 126146 3659 VPFFVFFLL True NCI_RA007_Epitope_Rep4 1127.6419399647498 1127.64028490379 20.175 3 -1.4828377194962672 0.4062984778678486 1.0 ['nc|ENSG00000184999|Q63ZE4-2|SLC22A10', 'ENSG00000184999|ENST00000332793|SLC22A10'] 29494 24643 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 102.53 3 -1.4830790871239061 0.4063054026313334 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 98323 21968 SIGIEEVF True PC9_epitope_Rep5 892.4541987647199 892.45310993586 89.532 2 -1.4831916745481086 0.4063309151134853 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.N3720Kfs*28|2|0.54|ENSG00000157423|chr16:70868720-70868721|-/T|frameshift_variant'] 124020 24843 VKLNLALA True H1975_Epitope_Rep2 840.5432885526399 840.54274496793 102.12 1 -1.4832451829889892 0.4063309151134853 1.0 ['nc|ENSG00000186919|Q401N2-2|ZACN', 'ENSG00000186919|ENST00000334586|ZACN'] 69644 19284 LVVPVLFM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 80.849 2 -1.4833422645205168 0.40634950256009517 1.0 ['ENSG00000145860|ENST00000424310|RNF145', 'nc|ENSG00000145860|Q96MT1-4|RNF145', 'nc|ENSG00000145860|Q96MT1-3|RNF145', 'nc|ENSG00000145860|Q96MT1-2|RNF145', 'nc|ENSG00000145860|Q96MT1-5|RNF145', 'RNF145|p.P393Lfs*7|1|0.15|ENSG00000145860|chr5:159163023-159163023|G/-|frameshift_variant'] 81383 22693 PPTPLICLLS True PC9_epitope_Rep3 1052.59400379616 1052.59290993586 92.557 2 -1.4834263913694856 0.4063516870575337 1.0 ['DNAH5|p.R4042P|1|0.35|ENSG00000039139|chr5:13721154-13721154|C/G|missense_variant'] 63690 18670 LPPWLFSRRRR True H1975_Epitope_Rep1 1482.86841969718 1482.8673299358602 77.862 2 -1.4834408981914946 0.4063516870575337 1.0 ['nc|ENSG00000117281|O95971-4|CD160', 'nc|ENSG00000117281|O95971-3|CD160'] 120088 24172 VFHGKPEKVFH True PC9_epitope_Rep2 1323.7087907379498 1323.70714490379 98.503 3 -1.4834690125187278 0.4063629790310918 1.0 ['ENST00000535730.1_1_11:73662114-73670750:+|nuORF', 'ENSG00000187726|ENST00000339764|DNAJB13'] 60928 10964 LKWRWNLFIFI True NCI_RA007_Epitope_Rep1 1534.8812757966596 1534.88016993586 46.641 2 -1.4834872932134895 0.4063629790310918 1.0 ['nc|ENSG00000162989|P48549-2|KCNJ3', 'KCNJ3|p.G431Efs*5|1|0.33|ENSG00000162989|chr2:154855097-154855097|G/-|frameshift_variant', 'ENSG00000162989|ENST00000295101|KCNJ3'] 122423 14459 VGSKCLWTYEI True NCI_RA007_Epitope_Rep2 1297.63765951329 1297.63656993586 60.905 2 -1.4835135419019783 0.4063629790310918 1.0 ['nc|ENSG00000127415|P35475-2|IDUA', 'ENSG00000127415|ENST00000514224|IDUA'] 66542 10946 LSSHLAKV True PC9_epitope_Rep2 853.5021520166499 853.50104993586 47.424 2 -1.4835191220315944 0.4063629790310918 1.0 ['ENSG00000163902|ENST00000296255|RPN1', 'ENST00000481168.1_1_3:128363760-128369658:-|nuORF', 'ENST00000497415.1_1_3:128359957-128369658:-|nuORF'] 114602 16298 TSLRVGRK True NCI_RA007_Epitope_Rep3 915.5613982282699 915.56030993586 71.81 2 -1.483567855113782 0.4063629790310918 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 47797 23454 IYQVRLKMI True PC9_epitope_Rep2 1162.6896355164997 1162.68852993586 95.686 2 -1.483665179637166 0.4063673469387755 1.0 ['ENST00000526129.5_1_1:76198579-76227103:+|nuORF'] 112434 20328 TNLRQLTKTSR True H1975_Epitope_Rep2 1316.75244645508 1316.7508049037901 84.237 3 -1.4837104934964367 0.4063673469387755 1.0 ['LUZP2|p.I41N|1|0.14|ENSG00000187398|chr11:24729228-24729228|T/A|missense_variant'] 53619 24434 KWDLALCL True H1975_Epitope_Rep3 960.5102741721998 960.50916993586 101.71 2 -1.4837323553770252 0.4063673469387755 1.0 ['ENSG00000131389|ENST00000622186|SLC6A6'] 119428 5601 VEPHSPSPSSK True NCI_RA007_Epitope_Rep1 1150.56185172074 1150.56074993586 25.85 2 -1.4837574892450087 0.4063673469387755 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 128046 23638 VRRKSRLRDPG True PC9_epitope_Rep1 1338.7956486797398 1338.79399490379 95.715 3 -1.4837986989028709 0.40637426968781704 1.0 ['SH3TC1|p.G743Afs*3|1|0.16|ENSG00000125089|chr4:8227919-8227919|C/-|frameshift_variant', 'ENST00000515682.5_1_4:8207046-8242679:+|nuORF', 'ENSG00000125089|ENST00000245105|SH3TC1', 'ENST00000512100.5_1_4:8211452-8220050:+|nuORF', 'ENST00000506360.5_1_4:8207046-8220006:+|nuORF'] 58195 18170 LESPFRIL True PC9_epitope_Rep4 973.5596668927699 973.55856993586 77.955 2 -1.4838504848283252 0.4063942913110396 1.0 ['ENST00000395900.1_1_11:32457375-32459526:+|nuORF'] 239 10340 AAGAQFPNYSP True PC9_epitope_Rep5 1121.5141732523298 1121.5130699358601 44.756 2 -1.4839598421232996 0.4063942913110396 1.0 ['ZIC3|p.P329Hfs*79|1|0.45|ENSG00000156925|chrX:137567675-137567675|C/-|frameshift_variant', 'nc|ENSG00000156925|O60481-2|ZIC3', 'ENSG00000156925|ENST00000287538|ZIC3'] 25486 13687 FENYYRKQRKK True NCI_RA007_Epitope_Rep2 1558.8368447853798 1558.8357499358601 57.882 2 -1.4839742294111522 0.4063942913110396 1.0 ['nc|ENSG00000138190|Q8TAG9-2|EXOC6', 'ENSG00000138190|ENST00000260762|EXOC6'] 13299 5775 DLYHHMQL True PC9_epitope_Rep1 1055.4858503295102 1055.48474993586 27.03 2 -1.4840158204512244 0.4063942913110396 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 79607 12454 PGYALHDPS True PC9_epitope_Rep4 955.4399456829101 955.43884993586 55.712 2 -1.484084578336336 0.4063942913110396 1.0 ['nc|ENSG00000177989|A8MYP8-2|CIMAP1B'] 72972 4002 NCPSFALH True PC9_epitope_Rep5 887.3959726959499 887.39486993586 20.472 2 -1.484101763465336 0.4063942913110396 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 59013 5973 LGAMTSMV True PC9_epitope_Rep5 808.38229677776 808.38118993586 27.97 2 -1.4841202329239525 0.4063942913110396 1.0 ['nc|ENSG00000171174|Q9H477-2|RBKS', 'ENSG00000171174|ENST00000302188|RBKS'] 11558 10262 DGQELMFRGLH True H1975_Epitope_Rep1 1301.61865540421 1301.61754993586 44.414 2 -1.4841801577344909 0.4063942913110396 1.0 ['nc|ENSG00000263528|Q14164-2|IKBKE', 'ENSG00000263528|ENST00000581977|IKBKE'] 108064 6429 TDIYVGDRAID True H1975_Epitope_Rep1 1236.59863115228 1236.5975299358602 29.789 2 -1.4841859150412724 0.4063942913110396 1.0 ['nc|ENSG00000134376|P82279-3|CRB1', 'ENSG00000134376|ENST00000367400|CRB1', 'nc|ENSG00000134376|P82279-4|CRB1', 'nc|ENSG00000134376|P82279-2|CRB1'] 111810 4495 TLRFIKYSRVW True NCI_RA007_Epitope_Rep2 1467.83505388023 1467.83341490379 22.115 3 -1.4842282961587803 0.4063942913110396 1.0 ['ENST00000450006.7_1_8:21961603-21961870:+|nuORF'] 84321 4282 QFLSLEWDADE True PC9_epitope_Rep5 1351.59321141867 1351.59157490379 21.539 3 -1.4842584589351306 0.4063942913110396 1.0 ['ENSG00000128829|ENST00000263791|EIF2AK4', 'nc|ENSG00000128829|Q9P2K8-2|EIF2AK4'] 94249 23655 RWRLPLTCLLL True PC9_epitope_Rep5 1382.82204666838 1382.8204049037902 95.969 3 -1.4843636808329286 0.4063942913110396 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 58204 15193 LESQKERL True PC9_epitope_Rep1 1001.55055876105 1001.54946993586 63.261 2 -1.484381508884917 0.4063942913110396 1.0 ['nc|ENSG00000205629|Q9UIC8-2|LCMT1', 'ENST00000572869.1_1_16:25162908-25186269:+|nuORF', 'nc|ENSG00000205629|Q9UIC8-3|LCMT1', 'ENSG00000205629|ENST00000399069|LCMT1'] 25751 22447 FFPPTPKFH True PC9_epitope_Rep5 1116.5756513100798 1116.5745499358602 91.343 2 -1.4843946800999208 0.40639647412727653 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39', 'ENST00000528810.1_1_8:145769259-145771014:-|nuORF'] 106914 14247 SYIRWPVPI True PC9_epitope_Rep5 1129.62841515893 1129.62676490379 59.806 3 -1.484457425769755 0.40639647412727653 1.0 ['ENSG00000242732|ENST00000609883|RTL5'] 51818 24206 KKKKKVQLTL True PC9_epitope_Rep4 1212.8281775946398 1212.8265449037901 101.59 3 -1.4845027239578803 0.4064150547413341 1.0 ['ENST00000527958.5_1_11:117041336-117041564:+|nuORF'] 60889 2867 LKRKLKFLIY True H1975_Epitope_Rep3 1320.8645631033598 1320.86290490379 15.228 3 -1.4845407260317973 0.4064219755619812 1.0 ['ENST00000563040.5_1_16:30007580-30010601:+|nuORF', 'nc|ENSG00000169592|Q8NBZ0-2|INO80E', 'ENSG00000169592|ENST00000563197|INO80E', 'ENST00000380503.7_1_16:30007553-30007939:+|nuORF', 'ENST00000568043.5_1_16:30007580-30007859:+|nuORF'] 61798 23618 LLKLVHGS True H1975_Epitope_Rep1 865.53853752537 865.53744993586 98.083 2 -1.4846320670316202 0.4064427370556482 1.0 ['nc|ENSG00000119523|Q9H553-2|ALG2'] 5294 7616 ALRSVSDP True PC9_epitope_Rep1 843.4450310633499 843.44392993586 34.115 2 -1.4846503352462581 0.4064427370556482 1.0 ['ENST00000602321.5_1_16:67682040-67682571:+|nuORF'] 72757 5651 NADLCPQMLK True PC9_epitope_Rep6 1131.54165095347 1131.54054993586 29.835 2 -1.4846601043013448 0.4064427370556482 1.0 ['nc|ENSG00000102103|O60828-7|PQBP1'] 39647 23366 HPQRQRRR True PC9_epitope_Rep5 1132.6438394959598 1132.6427499358601 94.862 2 -1.4848852276126268 0.4065002739534396 1.0 ['ENST00000338745.10_3_3:18466531-18466693:-|nuORF', 'ENST00000450898.1_1_3:18465198-18466693:-|nuORF'] 13322 12884 DLYYVRFTEWL True H1975_Epitope_Rep1 1503.7398160827097 1503.73870993586 54.629 2 -1.4849295872635677 0.4065002739534396 1.0 ['ENSG00000198218|ENST00000395443|QRICH1', 'ENST00000479449.1_1_3:49070551-49094468:-|nuORF'] 81389 21356 PPTSHFHVL True PC9_epitope_Rep3 1033.5345147740898 1033.5334099358602 87.443 2 -1.4850068118870499 0.4065002739534396 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'SMARCC2|p.K898Sfs*42|1|0.2|ENSG00000139613|chr12:56168124-56168124|T/-|frameshift_variant', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2', 'ENST00000549209.5_1_12:56565201-56568439:-|nuORF', 'ENST00000552931.1_1_12:56566100-56568508:-|nuORF'] 135982 11603 YFEKQKAEWQ True H1975_Epitope_Rep1 1355.65100107831 1355.64990993586 49.62 2 -1.4850140488513381 0.4065002739534396 1.0 ['ZC4H2|p.I151Sfs*36|1|0.36|ENSG00000126970|chrX:64919153-64919153|G/-|frameshift_variant', 'nc|ENSG00000126970|Q9NQZ6-3|ZC4H2', 'nc|ENSG00000126970|Q9NQZ6-5|ZC4H2', 'ENSG00000126970|ENST00000374839|ZC4H2'] 129054 9939 VTAMPPLPWK True H1975_Epitope_Rep1 1138.62088725034 1138.6197899358601 43.166 2 -1.4850285191301082 0.4065002739534396 1.0 ['ABCA5|p.Y1038Lfs*45|1|0.17|ENSG00000154265|chr17:69267971-69267974|AAGT/-|frameshift_variant'] 33718 10086 GLQYRTVS True PC9_epitope_Rep2 922.4872302285 922.48612993586 44.126 2 -1.485125207120646 0.4065002739534396 1.0 ['ENSG00000185736|ENST00000381312|ADARB2'] 118599 11997 VEAIREALVDK True NCI_RA007_Epitope_Rep4 1241.69795127073 1241.6968499358602 53.151 2 -1.485168124449169 0.4065002739534396 1.0 ['ENSG00000197408|ENST00000324071|CYP2B6', 'CYP2B6|p.L201Cfs*24|1|0.15|ENSG00000197408|chr19:41007020-41007020|C/-|frameshift_variant', 'nc|ENSG00000197408|P20813-2|CYP2B6'] 27930 15680 FQNRRMKWKMV True PC9_epitope_Rep5 1522.80132830714 1522.8002299358602 65.324 2 -1.485206946489327 0.4065002739534396 1.0 ['MEOX2|p.R244M|1|0.61|ENSG00000106511|chr7:15612571-15612571|C/A|missense_variant'] 114761 8863 TSWHHSDLLRK True H1975_Epitope_Rep1 1378.7105816431 1378.7094899358601 39.004 2 -1.4852285530022953 0.4065002739534396 1.0 ['ENSG00000164151|ENST00000296564|ICE1'] 34199 22223 GPHFLLCP True PC9_epitope_Rep4 882.4421946123799 882.44108993586 93.719 2 -1.4852314082018414 0.4065002739534396 1.0 ['ENST00000360001.10_1_1:1164082-1164292:-|nuORF'] 119598 17449 VERRRLERRT True NCI_RA007_Epitope_Rep3 1369.8014623361696 1369.80036993586 76.555 2 -1.485348583861724 0.40654908315167343 1.0 ['ENSG00000133030|ENST00000651222|MPRIP'] 55986 15233 LDIHHRIL True PC9_epitope_Rep3 1015.59269835655 1015.59160993586 63.743 2 -1.4853711384739778 0.40654908315167343 1.0 ['ENSG00000181652|ENST00000639579|ATG9B'] 34159 11962 GPEYLKRL True H1975_Epitope_Rep1 974.5549158654999 974.55380993586 51.016 2 -1.4854627186090146 0.40656291892522 1.0 ['nc|ENSG00000143033|Q9Y483-3|MTF2', 'nc|ENSG00000143033|Q9Y483-4|MTF2', 'ENSG00000143033|ENST00000370298|MTF2', 'ENST00000468457.1_1_1:93583908-93584959:+|nuORF', 'ENST00000471953.5_1_1:93545083-93592837:+|nuORF'] 97148 19579 SFFKSGFFIL True PC9_epitope_Rep6 1191.6328318330297 1191.6317299358602 87.975 2 -1.485468528796145 0.40656291892522 1.0 ['ENST00000505125.5_1_4:54245288-54325613:+|nuORF'] 120116 11175 VFIGFSNEF True NCI_RA007_Epitope_Rep2 1058.5072969667401 1058.5061899358602 48.049 2 -1.485481109643108 0.40656983657006973 1.0 ['nc|ENSG00000145990|Q9NXC2-3|GFOD1'] 79942 23518 PIRKIYIE True PC9_epitope_Rep2 1030.6175161220597 1030.61640993586 95.935 2 -1.485691041592881 0.4066277348439813 1.0 ['ENSG00000108932|ENST00000580666|SLC16A6'] 28245 8432 FRTEDWDWYRK True NCI_RA007_Epitope_Rep2 1600.7422756941999 1600.7411699358602 37.44 2 -1.485695353061235 0.4066277348439813 1.0 ['SLFN13|p.G678W|1|0.25|ENSG00000154760|chr17:35441257-35441257|C/A|missense_variant'] 41894 4967 IDYDRDRFDRE True NCI_RA007_Epitope_Rep2 1498.6800693604598 1498.67896993586 23.942 2 -1.4857051729756547 0.4066277348439813 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 29490 25418 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 104.38 3 -1.4857237421868341 0.4066277348439813 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 63766 14087 LPRVFVLPALL True NCI_RA007_Epitope_Rep4 1236.7958148371997 1236.79417490379 61.468 3 -1.4857320906015072 0.4066277348439813 1.0 ['VANGL2|p.R182P|1|0.09|ENSG00000162738|chr1:160419354-160419354|G/C|missense_variant'] 72966 3487 NCPSFALH True PC9_epitope_Rep1 887.3959726959499 887.39486993586 18.343 2 -1.4858597699107374 0.4066696195449459 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 65610 13440 LSGLPDTVFEI True PC9_epitope_Rep2 1189.6230549949698 1189.6219499358601 56.977 2 -1.4859323300840488 0.4066881913442822 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 82611 7299 PVKPSRPK True NCI_RA007_Epitope_Rep2 907.5603355991099 907.55922993586 33.011 2 -1.4859951120879678 0.4066951068839313 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 18418 4163 EKERLRQRAQA True NCI_RA007_Epitope_Rep4 1383.76949350155 1383.7678349037901 22.311 3 -1.4860767375182686 0.4067205930346403 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF', 'nc|ENSG00000123243|Q86UX2-3|ITIH5', 'nc|ENSG00000123243|Q86UX2-2|ITIH5', 'nc|ENSG00000123243|Q86UX2|ITIH5', 'ENSG00000123243|ENST00000397146|ITIH5'] 127650 15968 VRELRGLG True NCI_RA007_Epitope_Rep3 898.5348491272598 898.53374993586 70.484 2 -1.4860815291464538 0.4067205930346403 1.0 ['CTPS1|p.Q348Kfs*53|1|0.41|ENSG00000171793|chr1:41001065-41001065|C/-|frameshift_variant', 'ENSG00000171793|ENST00000650070|CTPS1'] 119896 14662 VEVYRSTK True PC9_epitope_Rep1 980.5290950404799 980.52798993586 61.218 2 -1.486162980031173 0.4067391633740107 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 83637 7907 QDYSKYPFEV True NCI_RA007_Epitope_Rep1 1274.58191845898 1274.58082993586 34.75 2 -1.4862298348846235 0.4067460779971561 1.0 ['KIRREL-CD1C|1|fusion', 'ENSG00000158481|ENST00000368170|CD1C'] 30166 7774 FYSPAQTA True PC9_epitope_Rep1 883.40758292547 883.40648993586 34.724 2 -1.4863536914884756 0.40675990675990675 1.0 ['nc|ENSG00000122778|Q9HCM3-2|KIAA1549', 'ENSG00000122778|ENST00000422774|KIAA1549', 'nc|ENSG00000122778|Q9HCM3-3|KIAA1549', 'nc|ENSG00000122778|Q9HCM3-4|KIAA1549'] 62503 14110 LLSRLEEL True PC9_epitope_Rep3 971.5651461960299 971.56404993586 59.36 2 -1.4863637381006385 0.40675990675990675 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 126110 16966 VPEEFAFA True NCI_RA007_Epitope_Rep2 908.4279840168798 908.42688993586 70.731 2 -1.486381468166911 0.4067668208995233 1.0 ['PHETA2|p.R118Gfs*93|1|0.25|ENSG00000177096|chr22:42077643-42077643|C/-|frameshift_variant', 'ENSG00000177096|ENST00000321753|PHETA2'] 12289 14539 DISNVLEWI True PC9_epitope_Rep4 1087.55497543515 1087.5538699358601 63.838 2 -1.4863998452954092 0.40677373487797486 1.0 ['ENSG00000104321|ENST00000262209|TRPA1'] 65762 7432 LSIHYLMLP True PC9_epitope_Rep1 1085.59433814933 1085.59324993586 33.402 2 -1.4864940411955923 0.4067806486952671 1.0 ['ENSG00000196305|ENST00000443024|IARS1'] 5275 4906 ALRHGASL True PC9_epitope_Rep2 823.46643521427 823.46532993586 24.237 2 -1.4865927019856144 0.4068177845113921 1.0 ['ENSG00000106384|ENST00000223114|MOGAT3', 'nc|ENSG00000106384|Q86VF5-3|MOGAT3'] 22178 6042 ETDANIAREL True NCI_RA007_Epitope_Rep4 1130.5567663402999 1130.5556699358601 29.857 2 -1.4865959094274332 0.4068177845113921 1.0 ['ADGRL3|p.A636D|1|0.41|ENSG00000150471|chr4:61909579-61909579|C/A|missense_variant'] 27264 9081 FLWQHGEE True PC9_epitope_Rep3 1044.4664947839199 1044.46538993586 39.869 2 -1.4867903484747131 0.4068333838301443 1.0 ['ENSG00000092439|ENST00000646667|TRPM7', 'TRPM7|p.M649V|1|0.42|ENSG00000092439|chr15:50612655-50612655|T/C|missense_variant'] 5422 15839 ALWAIPSEL True PC9_epitope_Rep2 998.54368247546 998.54258993586 66.183 2 -1.4868514495706306 0.4068333838301443 1.0 ['TDRD6|p.I1712Vfs*5|1|0.1|ENSG00000180113|chr6:46693262-46693290|ATTGACTCAGAGATAAAGCAGACTCTTGG/-|frameshift_variant', 'nc|ENSG00000180113|O60522-2|TDRD6', 'ENSG00000180113|ENST00000316081|TDRD6'] 99178 12412 SLARDCTLF True PC9_epitope_Rep1 1024.5011660404798 1024.5000699358602 52.605 2 -1.4868595226602401 0.4068333838301443 1.0 ['ENSG00000182791|ENST00000333861|CCDC87'] 77061 12334 NWDPETVGM True PC9_epitope_Rep5 1047.43314605031 1047.43204993586 52.436 2 -1.486901214909906 0.4068333838301443 1.0 ['ENSG00000091664|ENST00000263160|SLC17A6'] 41891 4514 IDYDRDRFDRE True H1975_Epitope_Rep3 1498.6800693604598 1498.67896993586 22.482 2 -1.4869540808615678 0.4068333838301443 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 135750 6144 YELLVGYP True H1975_Epitope_Rep3 952.4905842734399 952.48948993586 28.643 2 -1.4870113665707474 0.4068333838301443 1.0 ['nc|ENSG00000105146|Q9UQB9-2|AURKC', 'nc|ENSG00000105146|Q9UQB9-3|AURKC', 'ENSG00000105146|ENST00000302804|AURKC'] 133902 5079 WNFHWIYWLG True PC9_epitope_Rep5 1420.6716769532397 1420.6700249037901 24.561 3 -1.4870439396938904 0.4068333838301443 1.0 ['ENSG00000103375|ENST00000219660|AQP8'] 118274 8905 VCWWRYWWHYP True PC9_epitope_Rep1 1680.7448589768399 1680.7432049037898 39.092 3 -1.487065046192436 0.4068333838301443 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 67655 19192 LTFGRNTAR True PC9_epitope_Rep5 1034.5621265042598 1034.56102993586 78.861 2 -1.4870768892738329 0.4068333838301443 1.0 ['ENST00000318948.6_1_21:16386771-16415865:-|nuORF', 'ENST00000400199.5_1_21:16340786-16415865:-|nuORF'] 105223 6536 STQTSKIS True NCI_RA007_Epitope_Rep2 850.4396113297399 850.4390649679301 30.035 1 -1.487122626204727 0.4068472079798639 1.0 ['ENST00000370435.4_1_6:72003041-72003269:+|nuORF'] 401 17997 AALIVLTE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 76.019 2 -1.487175528762713 0.4068472079798639 1.0 ['nc|ENSG00000067225|P14618-2|PKM', 'ENST00000570166.1_1_15:72495361-72499152:-|nuORF', 'chr15:72202620-72203022|122|30.08|0.97|4.96|-|1|PKM,PKM|1'] 56376 16983 LDRSRRFI True NCI_RA007_Epitope_Rep3 1061.60941104985 1061.60887496793 74.665 1 -1.4872323780368735 0.40685411981309066 1.0 ['ENST00000419902.2_1_2:122463345-122485438:+|nuORF'] 8949 11688 AVGQQKEL True PC9_epitope_Rep1 871.4763311916298 871.4752299358599 49.834 2 -1.487319453486845 0.40685629056502637 1.0 ['MAP3K14|p.L634*|1|0.1|ENSG00000006062|chr17:45270486-45270486|C/-|frameshift_variant', 'ENSG00000006062|ENST00000344686|MAP3K14'] 129064 11372 VTAPHADP True PC9_epitope_Rep6 806.3922672145 806.39116993586 54.788 2 -1.4873857894262257 0.40685629056502637 1.0 ['ENST00000471957.1_1_9:140482023-140483371:-|nuORF'] 124424 15428 VLELDLSDMPL True PC9_epitope_Rep1 1243.63699080695 1243.6358899358602 64.162 2 -1.487457962117769 0.406863202050804 1.0 ['ENSG00000249715|ENST00000624922|FER1L5', 'nc|ENSG00000249715|A0AVI2-4|FER1L5', 'nc|ENSG00000249715|A0AVI2-2|FER1L5'] 110921 15615 TLARCDHAFCW True H1975_Epitope_Rep3 1321.56959703681 1321.56848993586 65.481 2 -1.487468797024113 0.4068653725152059 1.0 ['ENSG00000204839|ENST00000398882|MROH6'] 81196 18705 PPLMIPIF True NCI_RA007_Epitope_Rep4 926.52994698762 926.52884993586 80.924 2 -1.487530008786921 0.4068653725152059 1.0 ['nc|ENSG00000110693|P35712-4|SOX6', 'nc|ENSG00000110693|P35712-2|SOX6', 'nc|ENSG00000110693|P35712-3|SOX6', 'ENSG00000110693|ENST00000683767|SOX6'] 71748 10681 MMLSWLLQNEP True NCI_RA007_Epitope_Rep1 1360.65192967844 1360.6508299358602 45.537 2 -1.4875868118511555 0.4068835345108822 1.0 ['ENST00000288502.8_2_9:117373626-117379440:+|nuORF'] 55593 22792 LCLVPDELRAP True PC9_epitope_Rep1 1224.6536439306 1224.6520049037902 92.48 3 -1.4876293552596305 0.4068835345108822 1.0 ['ENST00000317568.9_1_11:65179968-65180214:+|nuORF'] 32527 16809 GGRGSHCP True NCI_RA007_Epitope_Rep4 769.32895576529 769.32840496793 72.836 1 -1.487636293617103 0.4068835345108822 1.0 ['ENST00000215555.6_1_19:8495585-8503477:+|nuORF'] 37055 11315 GVSEYELP True H1975_Epitope_Rep2 892.4178132559999 892.41726496793 48.57 1 -1.4876382690452024 0.4068835345108822 1.0 ['FGFR2-KIAA1967|5|fusion', 'FGFR2-KIAA1967|6|fusion', 'FGFR2-KIAA1967|8|fusion', 'FGFR2-KIAA1967|7|fusion', 'FGFR2-KIAA1967|3|fusion', 'FGFR2-KIAA1967|1|fusion', 'FGFR2-KIAA1967|4|fusion', 'FGFR2-KIAA1967|2|fusion', 'ENSG00000066468|ENST00000358487|FGFR2', 'nc|ENSG00000066468|P21802-16|FGFR2', 'nc|ENSG00000066468|P21802-3|FGFR2', 'nc|ENSG00000066468|P21802-18|FGFR2', 'nc|ENSG00000066468|P21802-5|FGFR2', 'nc|ENSG00000066468|P21802-6|FGFR2', 'nc|ENSG00000066468|P21802-17|FGFR2', 'nc|ENSG00000066468|P21802-2|FGFR2', 'nc|ENSG00000066468|P21802-8|FGFR2', 'nc|ENSG00000066468|P21802-21|FGFR2', 'nc|ENSG00000066468|P21802-20|FGFR2', 'nc|ENSG00000066468|P21802-4|FGFR2', 'nc|ENSG00000066468|P21802-22|FGFR2', 'nc|ENSG00000066468|P21802-23|FGFR2', 'nc|ENSG00000066468|P21802-15|FGFR2', 'ENST00000604236.5_1_10:123239373-123278228:-|nuORF', 'nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'BAG4-FGFR1|1|fusion', 'BAG4-FGFR1|2|fusion', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-3|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'nc|ENSG00000077782|P11362-8|FGFR1', 'nc|ENSG00000077782|P11362-9|FGFR1', 'nc|ENSG00000077782|P11362-10|FGFR1', 'nc|ENSG00000077782|P11362-11|FGFR1', 'nc|ENSG00000077782|P11362-12|FGFR1', 'nc|ENSG00000077782|P11362-13|FGFR1', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion'] 116533 6997 TYEGRQKMT True NCI_RA007_Epitope_Rep2 1112.52844341748 1112.52734993586 31.838 2 -1.4876764777792784 0.4068835345108822 1.0 ['ENSG00000047932|ENST00000368498|GOPC', 'nc|ENSG00000047932|Q9HD26-2|GOPC', 'nc|ENSG00000047932|Q9HD26-3|GOPC'] 39120 8602 HLDHALLYGP True H1975_Epitope_Rep2 1134.5821932425 1134.58108993586 38.041 2 -1.4877244517844725 0.4068835345108822 1.0 ['ENST00000462455.1_1_1:16011053-16044472:+|nuORF'] 15373 9845 EALLGQATPPG True NCI_RA007_Epitope_Rep2 1052.55022440788 1052.54912993586 42.919 2 -1.4878642893058163 0.4069090061749971 1.0 ['ENSG00000158773|ENST00000368021|USF1', 'ENST00000529476.1_1_1:161011414-161013065:-|nuORF', 'ENST00000491629.5_1_1:161011414-161013065:-|nuORF', 'nc|ENSG00000158773|P22415-2|USF1'] 41944 12115 IEARRRAH True PC9_epitope_Rep1 1007.5736942474698 1007.57258993586 51.462 2 -1.487935980852198 0.4069090061749971 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 75569 9061 NQNISLLQAEN True NCI_RA007_Epitope_Rep2 1242.6204292260197 1242.6193299358602 39.848 2 -1.4879850179689946 0.4069159161608277 1.0 ['ENST00000449849.2_1_2:203790299-203790389:+|nuORF'] 122080 19350 VGRCATSK True PC9_epitope_Rep2 820.4225217969599 820.42142993586 79.806 2 -1.4880119277939543 0.40692973564945883 1.0 ['nc|ENSG00000154639|P78310-3|CXADR'] 98735 12557 SIRRWAYQMFR True NCI_RA007_Epitope_Rep4 1512.7772217342797 1512.7761299358601 55.316 2 -1.4881082065057512 0.40692973564945883 1.0 ['ACACB|p.E285Q|1|0.24|ENSG00000076555|chr12:109167962-109167962|G/C|missense_variant'] 114542 4454 TSIDKIAAQ True PC9_epitope_Rep4 945.51311062317 945.51200993586 23.595 2 -1.4881948321595122 0.40693190423486925 1.0 ['ENSG00000184486|ENST00000328345|POU3F2', 'nc|ENSG00000184486|P20265-3|POU3F2', 'nc|ENSG00000184486|P20265-2|POU3F2', 'nc|ENSG00000196767|P49335|POU3F4', 'ENSG00000196767|ENST00000644024|POU3F4', 'ENSG00000198914|ENST00000361360|POU3F3'] 123612 10732 VIKVVKGG True H1975_Epitope_Rep2 798.5327238689398 798.53162993586 46.308 2 -1.4882998844504114 0.40693190423486925 1.0 ['ENSG00000111331|ENST00000228928|OAS3'] 29511 25351 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 106.92 3 -1.488395688598155 0.40694572270699114 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 56411 15166 LDSFARSAL True PC9_epitope_Rep1 978.5134449763399 978.51234993586 63.157 2 -1.4884491799834474 0.40694572270699114 1.0 ['nc|ENSG00000108039|Q9NQW7-2|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7|XPNPEP1', 'nc|ENSG00000108039|Q9NQW7-4|XPNPEP1', 'ENSG00000108039|ENST00000502935|XPNPEP1'] 61435 15160 LLETRGVVL True PC9_epitope_Rep3 998.6124307416198 998.61132993586 63.455 2 -1.4887273089407507 0.4070363466915191 1.0 ['ENSG00000117593|ENST00000649689|DARS2'] 36485 14556 GVIWQKCHF True NCI_RA007_Epitope_Rep4 1116.55387031968 1116.5527699358602 63.365 2 -1.4887398140566404 0.4070363466915191 1.0 ['ENST00000564439.5_1_15:66795703-66797150:-|nuORF'] 52946 21745 KRKSDRMEST True NCI_RA007_Epitope_Rep5 1236.62446906064 1236.6228149037902 90.753 3 -1.488786878622475 0.4070363466915191 1.0 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1'] 122015 6284 VGQHLPSV True PC9_epitope_Rep4 835.4552018242299 835.45410993586 31.228 2 -1.4888333261279063 0.4070428441628032 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 117212 14766 TYTNSSQPF True PC9_epitope_Rep5 1043.45598966987 1043.4548899358601 61.796 2 -1.4889350656829823 0.4070428441628032 1.0 ['POLD2|p.T192Rfs*2|1|0.17|ENSG00000106628|chr7:44117138-44117139|TG/-|frameshift_variant', 'ENST00000470867.5_1_7:44156819-44163110:-|nuORF', 'ENST00000463464.5_1_7:44156730-44161694:-|nuORF', 'ENSG00000106628|ENST00000610533|POLD2', 'ENST00000496539.1_1_7:44157490-44163110:-|nuORF'] 103210 18551 SQRIQRPGR True NCI_RA007_Epitope_Rep5 1096.62137271588 1096.62026993586 78.18 2 -1.4889656529234316 0.4070428441628032 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 130835 23048 VVFVPEPC True NCI_RA007_Epitope_Rep2 888.4415259060398 888.44042993586 96.196 2 -1.4889706979673039 0.4070428441628032 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 117341 10406 VAAPESRAP True PC9_epitope_Rep1 896.4715801643599 896.47048993586 44.911 2 -1.489003239435599 0.4070428441628032 1.0 ['ENST00000519231.5_1_8:66693177-66754193:-|nuORF'] 27468 10865 FNTETSYLH True H1975_Epitope_Rep2 1110.49818883502 1110.49708993586 46.822 2 -1.4890061740973948 0.4070428441628032 1.0 ['VCAN-CNTNAP3B|1|fusion', 'nc|ENSG00000283378|Q9BZ76-2|CNTNAP3', 'ENSG00000154529|ENST00000377561|CNTNAP3B', 'ENSG00000106714|ENST00000297668|CNTNAP3'] 12494 13660 DKYRDQYNWFF True PC9_epitope_Rep1 1580.7048275563195 1580.70372993586 57.398 2 -1.4890478055988163 0.40706139993243795 1.0 ['ENSG00000171155|ENST00000304661|C1GALT1C1'] 20899 5581 EQSSWFWRWL True H1975_Epitope_Rep1 1423.6673198487897 1423.6662299358602 26.533 2 -1.4890844512129868 0.4070683067747647 1.0 ['ENST00000339526.8_1_1:182360314-182360662:-|nuORF'] 97771 11261 SHGSWSDC True PC9_epitope_Rep5 877.3024662339301 877.3019149679301 48.305 1 -1.4891090713962223 0.4070868618155133 1.0 ['nc|ENSG00000100767|O95428-4|PAPLN', 'nc|ENSG00000100767|O95428-6|PAPLN', 'nc|ENSG00000100767|O95428-5|PAPLN', 'ENSG00000100767|ENST00000644200|PAPLN', 'PAPLN|p.S307I|1|0.19|ENSG00000100767|chr14:73252094-73252094|G/T|missense_variant'] 79002 9318 PFLLSLAG True H1975_Epitope_Rep1 816.47454028648 816.47344993586 40.748 2 -1.489152819058582 0.4070937682003494 1.0 ['ENST00000579192.5_1_17:8198292-8198649:-|nuORF'] 16691 6494 EEVFSKYLNFV True NCI_RA007_Epitope_Rep1 1373.6867178806897 1373.68507490379 29.28 3 -1.4893013537815536 0.407123970600226 1.0 ['PDE6C|p.P365Lfs*13|1|0.1|ENSG00000095464|chr10:93629277-93629277|C/-|frameshift_variant', 'ENSG00000095464|ENST00000371447|PDE6C'] 105178 9969 STNERRQSRFL True NCI_RA007_Epitope_Rep2 1392.7222089559598 1392.72110993586 43.405 2 -1.4895605185759144 0.4071541722965103 1.0 ['nc|ENSG00000142632|Q8IW93-2|ARHGEF19', 'ENSG00000142632|ENST00000270747|ARHGEF19'] 103220 18714 SQRQIRKSR True NCI_RA007_Epitope_Rep5 1157.67413656473 1157.67302993586 78.804 2 -1.4896194328348547 0.4071610776559934 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 40078 19547 HRARMIEYF True PC9_epitope_Rep6 1221.6076967976899 1221.60658993586 87.851 2 -1.4897433862968639 0.40716798285461364 1.0 ['nc|ENSG00000138670|Q0VAM2-2|RASGEF1B', 'nc|ENSG00000138670|Q0VAM2-3|RASGEF1B', 'ENSG00000138670|ENST00000264400|RASGEF1B'] 81762 13533 PSDNYDFPP True H1975_Epitope_Rep3 1050.42944056886 1050.42887496793 57.334 1 -1.4898542280867655 0.4071817927692881 1.0 ['nc|ENSG00000141255|Q8NHS9-3|SPATA22', 'ENSG00000141255|ENST00000572969|SPATA22'] 24789 25795 FCDVHPVL True NCI_RA007_Epitope_Rep5 928.4476739156399 928.44656993586 106.77 2 -1.489859048905798 0.4071817927692881 1.0 ['ENSG00000176567|ENST00000320048|OR4X1', 'OR4S2|p.V269Wfs*12|1|0.23|ENSG00000174982|chr11:55651707-55651707|G/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 64984 4341 LSDELQETHPK True NCI_RA007_Epitope_Rep2 1295.63574493699 1295.6346499358601 21.522 2 -1.4899106206344312 0.4071886974853536 1.0 ['nc|ENSG00000164011|Q5VV52-3|ZNF691', 'ENSG00000164011|ENST00000651192|ZNF691'] 134304 11882 WRVFREAEK True PC9_epitope_Rep3 1219.6461904813898 1219.6450899358601 50.721 2 -1.489951682143609 0.4071973446689571 1.0 ['ENST00000526586.6_1_16:2012350-2012557:-|nuORF'] 12690 10677 DLFDSTRDP True PC9_epitope_Rep3 1064.47745339044 1064.47634993586 46.014 2 -1.4900485526067062 0.4071973446689571 1.0 ['nc|ENSG00000116852|O75037-3|KIF21B', 'ENSG00000116852|ENST00000461742|KIF21B', 'nc|ENSG00000116852|O75037-2|KIF21B', 'nc|ENSG00000116852|O75037|KIF21B'] 46294 14912 ITELGEYPEPP True PC9_epitope_Rep5 1243.5972341699496 1243.59612993586 62.363 2 -1.49019229602221 0.4071973446689571 1.0 ['SOST|p.P38T|1|0.21|ENSG00000167941|chr17:43758630-43758630|G/T|missense_variant'] 122882 16375 VGVPTRAR True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50808496793 69.74 1 -1.4902067646566242 0.4071973446689571 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 73454 4765 NEVDLLGPNQ True NCI_RA007_Epitope_Rep1 1097.53530261973 1097.5342099358602 22.614 2 -1.4902180381753534 0.4071973446689571 1.0 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 117814 8904 VANGEDLK True PC9_epitope_Rep4 844.42904664604 844.4279499358599 41.786 2 -1.490250879148574 0.4071973446689571 1.0 ['nc|ENSG00000188986|Q8WX92|NELFB', 'ENSG00000188986|ENST00000343053|NELFB'] 36079 20053 GVEEEPFHTI True PC9_epitope_Rep4 1156.5400536469997 1156.53894993586 85.272 2 -1.490250890638975 0.4071973446689571 1.0 ['ENSG00000010292|ENST00000315579|NCAPD2', 'ENST00000535804.1_1_12:6637788-6638275:+|nuORF'] 61025 10739 LLAQQLVSP True PC9_epitope_Rep4 967.5702315764698 967.56912993586 49.064 2 -1.4902704273573977 0.4071973446689571 1.0 ['ENSG00000100294|ENST00000290429|MCAT'] 110627 10989 TITTEKQSQP True H1975_Epitope_Rep3 1131.57716743171 1131.57606993586 47.357 2 -1.4903246537466581 0.40720424848019005 1.0 ['ENSG00000185862|ENST00000330927|EVI2B', 'nc|ENSG00000185862|P34910-2|EVI2B'] 55519 9797 LAVYYSLIWQ True NCI_RA007_Epitope_Rep2 1254.6648602373 1254.66376993586 42.732 2 -1.4903720563556784 0.40720640983835654 1.0 ['ENSG00000259330|ENST00000638170|INAFM2'] 78348 9728 PATLRAAPL True NCI_RA007_Epitope_Rep4 908.5443511817998 908.54324993586 44.264 2 -1.490374502120653 0.40720640983835654 1.0 ['ENST00000592889.1_2_19:36230484-36231968:-|nuORF', 'ENST00000588992.5_2_19:36230484-36231989:-|nuORF'] 29777 13295 FVSNEVGEH True NCI_RA007_Epitope_Rep5 1016.45632402304 1016.45522993586 57.82 2 -1.49038728914953 0.40720815138282385 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 21389 15929 ERMLRALQAQ True H1975_Epitope_Rep1 1214.6553752661 1214.6542699358602 66.583 2 -1.4903968004456392 0.40720815138282385 1.0 ['ENSG00000130309|ENST00000252599|COLGALT1'] 10170 6736 CCCPCCGG True PC9_epitope_Rep4 744.15217989724 744.15162496793 33.101 1 -1.4904802268100819 0.40720815138282385 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 2916 14824 AFDWGNSDQ True NCI_RA007_Epitope_Rep4 1038.4042884501798 1038.4031899358602 64.484 2 -1.4904911260114058 0.40720815138282385 1.0 ['ENSG00000204021|ENST00000404190|LIPK'] 53336 10466 KTPRRFMDED True NCI_RA007_Epitope_Rep1 1293.6135700237699 1293.61192490379 44.693 3 -1.4905098230539537 0.40720815138282385 1.0 ['ENSG00000272333|ENST00000420124|KMT2B'] 30990 17524 GATLNPWRKA True PC9_epitope_Rep5 1112.6090766966802 1112.6079699358602 72.412 2 -1.4905158296479335 0.40720815138282385 1.0 ['ENSG00000160703|ENST00000409109|NLRX1'] 124590 9354 VLHEMMQQTFN True PC9_epitope_Rep6 1376.62169217932 1376.62003490379 46.166 3 -1.4905394431791905 0.40720815138282385 1.0 ['ENSG00000228083|ENST00000380222|IFNA14'] 124762 14430 VLKLPVRSL True PC9_epitope_Rep1 1023.68045073179 1023.6793499358599 60.328 2 -1.490663811701753 0.40722669896129304 1.0 ['ENSG00000132313|ENST00000337109|MRPL35', 'ENST00000404272.2_1_6:13949414-13949672:+|nuORF', 'nc|ENSG00000132313|Q9NZE8-2|MRPL35', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 35988 10551 GVCCFPCL True NCI_RA007_Epitope_Rep3 840.3332384103599 840.33214993586 48.558 2 -1.4910978103416161 0.40726853523062057 1.0 ['ENST00000465987.1_1_20:34053609-34055133:+|nuORF'] 126473 16669 VPLVLVLT True H1975_Epitope_Rep2 852.56844067132 852.56734993586 69.35 2 -1.4911313547730711 0.4072823391050199 1.0 ['ENSG00000143515|ENST00000368489|ATP8B2', 'nc|ENSG00000143515|P98198|ATP8B2', 'nc|ENSG00000143515|P98198-3|ATP8B2', 'nc|ENSG00000143515|P98198-4|ATP8B2', 'ENST00000426445.1_1_1:154301436-154313374:+|nuORF', 'nc|ENSG00000143515|P98198-2|ATP8B2'] 9331 3952 AVSRGPATP True NCI_RA007_Epitope_Rep4 854.46101548066 854.45990993586 21.437 2 -1.4911479785435193 0.4072823391050199 1.0 ['ENST00000586624.1_2_19:38709694-38718681:-|nuORF'] 119920 13819 VEWVLEEVAQ True PC9_epitope_Rep2 1200.60265390356 1200.60154993586 58.437 2 -1.4912226224485803 0.40728924080111784 1.0 ['ENSG00000114735|ENST00000232854|HEMK1', 'ENST00000448997.5_1_3:50608680-50617422:+|nuORF', 'ENST00000482974.1_1_3:50614485-50617422:+|nuORF'] 114930 16320 TTFDRQSYNQS True H1975_Epitope_Rep3 1345.58985737373 1345.58876993586 68.249 2 -1.4912406314089368 0.40729614233648886 1.0 ['ENST00000358691.9_2_17:65072815-65072944:-|nuORF'] 71596 10110 MLKEMYFEAFR True NCI_RA007_Epitope_Rep1 1463.6941288435899 1463.69302993586 43.337 2 -1.4912882765265094 0.4073004599173313 1.0 ['ENST00000554231.5_1_14:74538173-74538628:-|nuORF'] 54812 22754 LAFFRFPR True PC9_epitope_Rep5 1052.5919700805598 1052.59137496793 92.523 1 -1.4913139006609273 0.4073004599173313 1.0 ['nc|ENSG00000137492|O43422-2|THAP12', 'ENSG00000137492|ENST00000260045|THAP12'] 29922 26169 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 108.3 3 -1.4913552938396268 0.4073004599173313 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 5354 5398 ALTALLDLGG True NCI_RA007_Epitope_Rep3 942.5385970950199 942.53750993586 28.243 2 -1.4913774211593918 0.4073004599173313 1.0 ['SHANK1|p.L1994Sfs*41|1|0.5|ENSG00000161681|chr19:50662472-50662473|-/G|frameshift_variant', 'nc|ENSG00000161681|Q9Y566-3|SHANK1', 'ENSG00000161681|ENST00000293441|SHANK1', 'ENST00000483128.1_1_19:51214585-51217198:-|nuORF'] 121742 20059 VGLRWRPL True PC9_epitope_Rep6 995.6028691174299 995.60176993586 89.824 2 -1.4914570241589307 0.4073073609202897 1.0 ['ENST00000592685.5_1_19:10570095-10570353:+|nuORF', 'ENST00000591971.5_1_19:10570113-10572229:+|nuORF'] 99028 12353 SKRRDKRWVKY True H1975_Epitope_Rep2 1520.8688136199999 1520.8677099358601 52.601 2 -1.4914966887596939 0.4073280629649897 1.0 ['ENST00000523402.5_1_8:22411983-22419017:+|nuORF', 'ENST00000517535.5_1_8:22411983-22423386:+|nuORF', 'ENSG00000120896|ENST00000240123|SORBS3'] 10167 8217 CCCPCCGG True PC9_epitope_Rep1 744.15217989724 744.15162496793 36.439 1 -1.4915297091705182 0.4073280629649897 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 23180 20018 EVPNEKCHL True PC9_epitope_Rep5 1067.5069796969099 1067.50588993586 82.051 2 -1.4915956856832908 0.4073280629649897 1.0 ['ENSG00000197520|ENST00000445590|FAM177B'] 46417 17803 ITKTMELKPL True PC9_epitope_Rep1 1172.6838814297198 1172.68278993586 73.274 2 -1.4916548302810066 0.4073582489230411 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 113506 25035 TQTAIAAAIAL True NCI_RA007_Epitope_Rep5 1042.6022599807397 1042.60116993586 103.8 2 -1.4917558013151335 0.4073884341782026 1.0 ['nc|ENSG00000254402|Q50LG9|LRRC24'] 43333 25183 IHGGPPGY True PC9_epitope_Rep1 796.3867879112399 796.38568993586 101.75 2 -1.4917827687467466 0.4073953336748475 1.0 ['nc|ENSG00000137474|Q13402-8|MYO7A', 'nc|ENSG00000137474|Q13402-2|MYO7A', 'nc|ENSG00000137474|Q13402-7|MYO7A', 'nc|ENSG00000137474|Q13402-6|MYO7A', 'ENSG00000137474|ENST00000409709|MYO7A', 'ENST00000481328.7_1_11:76890894-76905079:+|nuORF', 'nc|ENSG00000137474|Q13402-5|MYO7A'] 85249 9663 QKLLSHVCS True H1975_Epitope_Rep1 1013.53280052193 1013.53170993586 42.094 2 -1.4920089101285086 0.4074160312008848 1.0 ['ENSG00000196208|ENST00000381486|GREB1'] 4318 10582 AILRCQDV True PC9_epitope_Rep2 916.48003667308 916.47892993586 46.021 2 -1.4920107864881453 0.4074160312008848 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 18720 19707 ELDIHHRIL True PC9_epitope_Rep4 1144.6352914445201 1144.6341899358601 83.926 2 -1.492042689861748 0.4074160312008848 1.0 ['ENSG00000181652|ENST00000639579|ATG9B'] 36205 16402 GVFTTQTN True PC9_epitope_Rep3 866.4133965819001 866.41228993586 68.229 2 -1.4921024155990659 0.40741818689826187 1.0 ['nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C'] 48863 9699 KESQVDELNIW True NCI_RA007_Epitope_Rep1 1359.6670450652698 1359.66594993586 41.727 2 -1.4921240604098893 0.40741818689826187 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 12372 11363 DIYSSFGFPR True PC9_epitope_Rep1 1187.56112344475 1187.56002993586 48.588 2 -1.4922343264215616 0.40742508556660223 1.0 ['ENSG00000196611|ENST00000315274|MMP1'] 26807 6505 FLEEATEA True PC9_epitope_Rep1 908.4127278755599 908.41162993586 29.824 2 -1.4922663580469513 0.40742724097788124 1.0 ['ENST00000505030.5_1_5:87961954-87962140:-|nuORF'] 2425 5140 AEQLRGFNA True PC9_epitope_Rep2 1004.5039429217999 1004.50284993586 25.15 2 -1.492272828494029 0.40742724097788124 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 10168 7783 CCCPCCGG True PC9_epitope_Rep2 744.15217989724 744.15162496793 35.311 1 -1.4925463795136211 0.40749234583997856 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 33507 7008 GLGVWEARGYG True H1975_Epitope_Rep1 1163.5723568347898 1163.5712499358601 31.991 2 -1.4925805936609011 0.4075108844962865 1.0 ['nc|ENSG00000178026|Q2VPJ9-2|LRRC75B'] 56780 13300 LEATFGCRMSP True PC9_epitope_Rep3 1210.5474646098999 1210.5463699358602 56.192 2 -1.4926667810355183 0.4075177816839924 1.0 ['nc|ENSG00000022556|Q9NX02-3|NLRP2', 'ENST00000540597.5_1_19:55476735-55501561:+|nuORF', 'nc|ENSG00000022556|Q9NX02-4|NLRP2', 'nc|ENSG00000022556|Q9NX02-5|NLRP2', 'nc|ENSG00000022556|Q9NX02-2|NLRP2', 'ENSG00000022556|ENST00000448584|NLRP2', 'nc|ENSG00000167634|Q8WX94|NLRP7', 'nc|ENSG00000167634|Q8WX94-2|NLRP7', 'ENSG00000167634|ENST00000588756|NLRP7'] 131545 21461 VVVKDQRR True PC9_epitope_Rep6 998.5985120129799 998.59740993586 95.424 2 -1.4926832078533412 0.4075199348117106 1.0 ['CON__A2I7N1'] 135327 4760 YCRRWRYWEYW True NCI_RA007_Epitope_Rep1 1765.7936000744096 1765.79194490379 22.595 3 -1.4927906626324563 0.4075199348117106 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 92402 12399 RQRRATPPA True H1975_Epitope_Rep1 1051.5999089953098 1051.5988099358601 52.726 2 -1.4929026141660204 0.40753847228365886 1.0 ['ENST00000608937.5_1_9:137000676-137000952:+|nuORF'] 22501 10224 ETIVKSYEEAG True H1975_Epitope_Rep1 1224.58739776224 1224.58630993586 44.269 2 -1.492927174141435 0.4075522652139498 1.0 ['ENSG00000169989|ENST00000304337|TIGD4'] 74903 21882 NLRHRYYEWTK True PC9_epitope_Rep2 1564.7898945929599 1564.7887899358602 89.644 2 -1.4929321712309176 0.4075522652139498 1.0 ['USH2A|p.A508Efs*83|1|0.15|ENSG00000042781|chr1:216323501-216323501|G/-|frameshift_variant'] 72555 23849 MVIMKRWLPWR True PC9_epitope_Rep2 1514.8366511866998 1514.8355499358602 97.205 2 -1.4930030489852733 0.4075682093304777 1.0 ['ENST00000409333.1_1_2:170657480-170662026:+|nuORF'] 9679 14311 AYGYDHSP True NCI_RA007_Epitope_Rep5 908.36644638948 908.36534993586 61.74 2 -1.4930680451792493 0.4075682093304777 1.0 ['ENSG00000145391|ENST00000274031|SETD7'] 125561 8187 VLYLTPPP True NCI_RA007_Epitope_Rep5 898.5164050984599 898.51530993586 38.173 2 -1.4930943421952267 0.4075682093304777 1.0 ['ENST00000064778.8_1_11:73116189-73116408:-|nuORF'] 111361 24013 TLILMFAW True PC9_epitope_Rep3 993.53576064405 993.53466993586 97.652 2 -1.4931020444228462 0.4075682093304777 1.0 ['ENSG00000146477|ENST00000275300|SLC22A3'] 92157 15913 RQDFIFTIYHW True PC9_epitope_Rep3 1524.75138382592 1524.74917987172 66.357 4 -1.493309116591117 0.40760268631353513 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000285383.6_1_7:6895426-6899450:-|nuORF'] 18241 10514 EISESRVPI True H1975_Epitope_Rep1 1028.5502244078798 1028.54912993586 45.394 2 -1.4933661948578265 0.40760268631353513 1.0 ['nc|ENSG00000116514|Q6ZMZ0|RNF19B', 'nc|ENSG00000116514|Q6ZMZ0-2|RNF19B', 'ENSG00000116514|ENST00000235150|RNF19B', 'nc|ENSG00000116514|Q6ZMZ0-3|RNF19B'] 67639 23784 LTFAWLRRYIK True PC9_epitope_Rep5 1465.85578932481 1465.85413490379 96.467 3 -1.4934054767586045 0.40760268631353513 1.0 ['ENSG00000156502|ENST00000359655|SUPV3L1'] 44416 12375 INGEVVGSKR True PC9_epitope_Rep1 1057.5880068989297 1057.5869099358601 52.459 2 -1.4934240083576118 0.40760268631353513 1.0 ['TDRD1|p.G101R|1|0.47|ENSG00000095627|chr10:114188132-114188132|G/A|missense_variant'] 110870 9930 TLADSVCRYD True NCI_RA007_Epitope_Rep1 1141.50737361973 1141.50626993586 42.628 2 -1.4934834328478626 0.40760268631353513 1.0 ['nc|ENSG00000077684|Q6IE81-3|JADE1', 'nc|ENSG00000077684|Q6IE81-2|JADE1', 'ENSG00000077684|ENST00000226319|JADE1'] 88689 7551 RCKEPLRYSY True NCI_RA007_Epitope_Rep2 1313.65504091293 1313.65394993586 33.997 2 -1.4935418567843726 0.40760958122861335 1.0 ['nc|ENSG00000002746|Q76N89-2|HECW1', 'HECW1|p.S1539Kfs*53|2|0.23|ENSG00000002746|chr7:43554695-43554696|-/A|frameshift_variant', 'ENSG00000002746|ENST00000395891|HECW1', 'HECW1|p.E379Nfs*32|1|0.36|ENSG00000002746|chr7:43444304-43444304|G/-|frameshift_variant', 'ENST00000492310.5_1_7:43153648-43477745:+|nuORF'] 69254 6899 LVNVRFDY True H1975_Epitope_Rep1 1024.53418042092 1024.53308993586 31.577 2 -1.4936125045940376 0.40763500931098695 1.0 ['TENM1|p.A2037V|1|0.64|ENSG00000009694|chrX:124384800-124384800|G/A|missense_variant'] 119809 23288 VEVHGLRKR True NCI_RA007_Epitope_Rep4 1092.651610215 1092.65050993586 101.14 2 -1.4936935722925768 0.40763500931098695 1.0 ['ENSG00000167716|ENST00000409644|WDR81', 'nc|ENSG00000167716|Q562E7-4|WDR81'] 133189 20296 WDWWHRRRRRT True NCI_RA007_Epitope_Rep1 1709.8875920019698 1709.88648993586 83.155 2 -1.4937170191436544 0.40764190360912933 1.0 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 2845 13346 AEVTPAAW True NCI_RA007_Epitope_Rep2 843.41266830591 843.41211496793 56.551 1 -1.4938678611741365 0.4076837131351691 1.0 ['GCDH|p.Q167Sfs*57|1|0.36|ENSG00000105607|chr19:12893644-12893644|C/-|frameshift_variant'] 35224 14216 GSHHQLQSA True PC9_epitope_Rep5 963.45224170211 963.45114993586 59.687 2 -1.4940784600357473 0.40769015920305374 1.0 ['ENSG00000143631|ENST00000368799|FLG', 'CON__P20930'] 120869 4537 VGDSLHNF True NCI_RA007_Epitope_Rep1 887.4137309350701 887.41262993586 21.749 2 -1.4941558812978277 0.40769015920305374 1.0 ['nc|ENSG00000148482|Q504Y0-5|SLC39A12', 'nc|ENSG00000148482|Q504Y0-3|SLC39A12', 'nc|ENSG00000148482|Q504Y0-4|SLC39A12', 'ENSG00000148482|ENST00000377369|SLC39A12'] 29896 23271 FWAVQPRRR True PC9_epitope_Rep4 1214.6784936691797 1214.67685490379 97.764 3 -1.4941646919357563 0.40769015920305374 1.0 ['ENST00000587101.1_1_19:36231353-36231398:-|nuORF'] 80931 15837 PMMPNEARL True PC9_epitope_Rep4 1057.50487152193 1057.5037699358602 68.84 2 -1.4941702650615027 0.40769015920305374 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 48565 23943 KEHKVDKNDA True NCI_RA007_Epitope_Rep5 1182.59929985862 1182.59764490379 99.472 3 -1.4941916721073378 0.40769015920305374 1.0 ['ESCO2|p.E305D|1|0.1|ENSG00000171320|chr8:27780227-27780227|G/T|missense_variant'] 59644 18973 LGSNAREESSI True PC9_epitope_Rep4 1161.56257999673 1161.5614899358602 81.069 2 -1.4942746144240884 0.40769015920305374 1.0 ['ENSG00000101126|ENST00000621696|ADNP'] 39445 18345 HNAEIALPVL True PC9_epitope_Rep5 1075.60259433391 1075.6014899358602 75.58 2 -1.4943232234477295 0.40770349682899865 1.0 ['ENST00000577711.1_1_17:73389565-73389709:-|nuORF'] 139655 7799 YTSNDDVLED True NCI_RA007_Epitope_Rep1 1169.47242757965 1169.47132993586 34.326 2 -1.494324581597231 0.40770349682899865 1.0 ['ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant'] 116415 9029 TWNHTVFY True H1975_Epitope_Rep1 1066.4872302284998 1066.4861299358602 39.636 2 -1.4943258378429267 0.40770349682899865 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant'] 126243 16722 VPGWVLVCA True NCI_RA007_Epitope_Rep4 942.4997094884999 942.49860993586 72.505 2 -1.494411818163178 0.40770349682899865 1.0 ['ENST00000512215.5_1_4:102268226-102268316:-|nuORF'] 108166 7524 TDSPRNNALKY True H1975_Epitope_Rep2 1277.63641364333 1277.63530993586 33.892 2 -1.4945117308247593 0.40770349682899865 1.0 ['ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 46876 10381 IVGSPGSRLEK True H1975_Epitope_Rep3 1141.64552177505 1141.6444299358602 44.987 2 -1.4945154920898702 0.40770349682899865 1.0 ['ENSG00000124772|ENST00000244751|CPNE5'] 12542 9652 DLCMKRLL True PC9_epitope_Rep1 990.53544337422 990.53434993586 41.982 2 -1.4945286632565065 0.40770349682899865 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31', 'ENST00000504022.1_1_5:74434805-74464953:-|nuORF'] 34976 11041 GRAAAAIPT True PC9_epitope_Rep5 826.4661008611 826.4655549679301 47.457 1 -1.4947300799489025 0.40773366226028673 1.0 ['ENST00000395348.7_1_10:61444064-61469743:-|nuORF'] 137218 17026 YLEPSILGL True NCI_RA007_Epitope_Rep3 1003.5589981864299 1003.55790993586 74.831 2 -1.4947626345782743 0.40773580953710814 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 45918 10846 ISRTHPEWP True H1975_Epitope_Rep3 1121.56179215109 1121.5606899358602 46.801 2 -1.4948074697201224 0.40773580953710814 1.0 ['ENST00000492663.1_1_7:75684247-75684286:+|nuORF'] 84353 10257 QGAEAKAP True NCI_RA007_Epitope_Rep3 770.3922672144998 770.39116993586 47.421 2 -1.4948243910671095 0.407742701218306 1.0 ['ENSG00000164626|ENST00000359534|KCNK5'] 20719 14684 EQKWKWWEEER True H1975_Epitope_Rep1 1632.76849044204 1632.7673899358601 61.697 2 -1.494939592473706 0.40776122876425414 1.0 ['ENSG00000198900|ENST00000361337|TOP1'] 87869 18907 QVLEIHGV True PC9_epitope_Rep3 893.49706663621 893.49596993586 77.947 2 -1.4950118290598433 0.4077793032834571 1.0 ['nc|ENSG00000065534|Q15746-4|MYLK', 'nc|ENSG00000065534|Q15746-5|MYLK', 'nc|ENSG00000065534|Q15746-2|MYLK', 'nc|ENSG00000065534|Q15746-3|MYLK', 'nc|ENSG00000065534|Q15746-6|MYLK', 'ENSG00000065534|ENST00000360304|MYLK', 'MYLK|p.K903Rfs*3|1|0.3|ENSG00000065534|chr3:123700762-123700762|C/-|frameshift_variant', 'ENST00000506361.5_1_3:123456168-123512688:-|nuORF'] 83007 19244 PYILIAAG True PC9_epitope_Rep4 816.47454028648 816.47344993586 82.124 2 -1.4950280907764557 0.4077793032834571 1.0 ['ENST00000497497.1_1_10:119013719-119036774:+|nuORF', 'ENSG00000165646|ENST00000644641|SLC18A2'] 11313 3957 DETSYRQE True PC9_epitope_Rep4 1026.42541781758 1026.4243299358602 21.439 2 -1.4950409965130669 0.4077793032834571 1.0 ['ENSG00000010626|ENST00000443597|LRRC23'] 38301 18547 HFPDFDKKI True PC9_epitope_Rep1 1145.58694426977 1145.58529490379 76.131 3 -1.4951256914455022 0.4077793032834571 1.0 ['nc|ENSG00000130958|Q76EJ3-2|SLC35D2', 'ENSG00000130958|ENST00000253270|SLC35D2'] 69452 24821 LVRVFKIYLT True PC9_epitope_Rep5 1250.7750793926198 1250.77398993586 100.63 2 -1.4951620640037457 0.4077793032834571 1.0 ['nc|ENSG00000183260|Q9H3Z7|ABHD16B'] 133543 18032 WHLNKRYNRKR True H1975_Epitope_Rep1 1569.8752959827696 1569.8741899358602 75.137 2 -1.4951991029008878 0.4077793032834571 1.0 ['ENSG00000136522|ENST00000476781|MRPL47', 'nc|ENSG00000136522|Q9HD33-2|MRPL47', 'nc|ENSG00000136522|Q9HD33-3|MRPL47'] 91590 21265 RPAQQDHWL True PC9_epitope_Rep5 1149.56794016069 1149.56684993586 86.846 2 -1.495280652032432 0.40778619381711984 1.0 ['ENST00000445817.1_1_1:227618561-227618687:+|nuORF'] 127114 17320 VQCLRLAF True PC9_epitope_Rep4 948.5215075622399 948.52040993586 74.629 2 -1.4953122341516767 0.4077952297847586 1.0 ['nc|ENSG00000197555|O43166-3|SIPA1L1', 'ENSG00000197555|ENST00000381232|SIPA1L1', 'nc|ENSG00000197555|O43166|SIPA1L1'] 122667 21408 VGTQSAGK True PC9_epitope_Rep4 746.3922672145 746.39171496793 90.519 1 -1.4953245833973683 0.4077952297847586 1.0 ['ENSG00000153201|ENST00000283195|RANBP2', 'RANBP2|p.S2884L|2|0.23|ENSG00000153201|chr2:108781320-108781320|C/T|missense_variant'] 57872 5292 LEQERWQREMM True NCI_RA007_Epitope_Rep4 1534.7020677583398 1534.7004149037898 26.908 3 -1.4953895604168947 0.4077952297847586 1.0 ['ENSG00000108819|ENST00000612501|PPP1R9B'] 57118 7454 LEENVRNQIP True H1975_Epitope_Rep3 1210.6305999868998 1210.6295099358601 33.65 2 -1.4954122773925946 0.4077995206738488 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 17643 17160 EHQKKVRKM True H1975_Epitope_Rep2 1182.6655460269797 1182.66391490379 71.286 3 -1.4954227040160013 0.4077995206738488 1.0 ['ENSG00000255150|ENST00000527879|EID3'] 140211 4068 YWINKRRRYGM True NCI_RA007_Epitope_Rep2 1541.80377083529 1541.80213490379 20.461 3 -1.4954829996278731 0.4077995206738488 1.0 ['ENSG00000186118|ENST00000334122|TEX38'] 30448 20973 GAGDLGGF True NCI_RA007_Epitope_Rep1 692.31295426464 692.3124049679301 85.827 1 -1.4955080139694439 0.4077995206738488 1.0 ['ENST00000246672.3_1_17:38251239-38251841:-|nuORF'] 60599 25677 LISKLTTKL True PC9_epitope_Rep1 1015.66413196131 1015.66357496793 103.8 1 -1.4955482366873105 0.40780641033098713 1.0 ['L1M3_dup291|chr1:173794566-173795729:+|1.1397011898258065|0.3648644439828962|1.64|502.0|40|3|sense'] 127170 4570 VQETVTIDNEK True NCI_RA007_Epitope_Rep2 1274.6354105838197 1274.63377490379 22.403 3 -1.4956197943710885 0.40783396735653044 1.0 ['ENSG00000183607|ENST00000328895|GKN2'] 35105 17618 GRRLQARRFRR True NCI_RA007_Epitope_Rep5 1470.8868637259798 1470.88522490379 74.55 3 -1.495712581455042 0.40783396735653044 1.0 ['ENSG00000213903|ENST00000345363|LTB4R'] 112763 19859 TPKRRRLWR True H1975_Epitope_Rep3 1267.7737910363498 1267.7726899358602 83.145 2 -1.4957724421367289 0.40783396735653044 1.0 ['ENST00000356840.7_1_6:16129383-16129569:+|nuORF'] 1464 4420 AEELLGSL True NCI_RA007_Epitope_Rep5 830.43854870058 830.43744993586 23.634 2 -1.4958096753873413 0.40783396735653044 1.0 ['MYH15|p.H1065Pfs*7|1|0.16|ENSG00000144821|chr3:108437641-108437641|T/-|frameshift_variant', 'ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF', 'MYH15|p.K849Sfs*9|1|0.15|ENSG00000144821|chr3:108444809-108444809|T/-|frameshift_variant'] 101925 7554 SPLMPHLFR True NCI_RA007_Epitope_Rep2 1096.5851704479599 1096.58406993586 34.009 2 -1.4958767210046633 0.40784514447908427 1.0 ['ENSG00000173391|ENST00000309539|OLR1', 'ENST00000536989.1_1_12:10312481-10313100:-|nuORF'] 13550 3479 DPLFDWTMNPL True NCI_RA007_Epitope_Rep2 1347.61692406871 1347.6158299358601 18.188 2 -1.495919106999742 0.40784514447908427 1.0 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF', 'ENST00000525178.5_1_11:108217294-108236232:+|nuORF'] 90478 5848 RIWWNWLCLSW True NCI_RA007_Epitope_Rep2 1561.76526006825 1561.76362490379 27.365 3 -1.496054412754061 0.40784514447908427 1.0 ['ENST00000558850.5_1_14:102798088-102800954:+|nuORF'] 5976 9883 APKTQRTRR True NCI_RA007_Epitope_Rep2 1112.6526728441597 1112.6515699358602 43.069 2 -1.4960759364538245 0.40784514447908427 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP'] 70698 7530 MDLYFFLLAGI True NCI_RA007_Epitope_Rep2 1301.67298239285 1301.67188993586 33.916 2 -1.4961102845418979 0.40784514447908427 1.0 ['ENSG00000110446|ENST00000227880|SLC15A3', 'ENST00000536784.5_2_11:60704693-60705015:-|nuORF'] 43063 5068 IGGVVAVPMV True NCI_RA007_Epitope_Rep3 940.54157430048 940.54046993586 26.927 2 -1.4962572374812038 0.40786366544523933 1.0 ['nc|ENSG00000165949|P40305-1|IFI27'] 77054 10657 NVYVSGGN True H1975_Epitope_Rep3 808.3715317699199 808.3709849679301 46.066 1 -1.4962924612515989 0.4078705534746295 1.0 ['ENST00000345365.10_1_17:33427675-33427975:-|nuORF'] 36348 19044 GVHFWLRLL True PC9_epitope_Rep1 1139.6603839935499 1139.65873490379 78.043 3 -1.4963208195821862 0.40787744134377146 1.0 ['nc|ENSG00000163704|Q5FWE3-2|PRRT3', 'ENSG00000163704|ENST00000412055|PRRT3'] 43471 10599 IHVCLHLA True PC9_epitope_Rep1 904.4952928143999 904.49418993586 45.663 2 -1.4963986010729824 0.40788432905267075 1.0 ['nc|ENSG00000164896|Q14296-4|FASTK', 'nc|ENSG00000164896|Q14296-3|FASTK', 'ENSG00000164896|ENST00000297532|FASTK', 'ENST00000478477.1_1_7:150775105-150776989:-|nuORF', 'ENST00000467237.5_1_7:150776545-150777049:-|nuORF', 'ENST00000482806.5_1_7:150774217-150777853:-|nuORF'] 51841 5313 KKKVIPAPKPK True PC9_epitope_Rep1 1232.8332629750796 1232.83216993586 25.277 2 -1.4964169346481861 0.40789121660133304 1.0 ['ENSG00000157741|ENST00000473989|UBN2', 'nc|ENSG00000157741|Q6ZU65-2|UBN2'] 34249 23442 GPKKTKRE True PC9_epitope_Rep5 942.5610638750999 942.55996993586 95.153 2 -1.496473310681762 0.4078981039897639 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 38157 4116 HERGDVTITK True H1975_Epitope_Rep3 1154.60438523906 1154.6032899358602 20.956 2 -1.4965858449520921 0.40790713363497844 1.0 ['nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF', 'LRRIQ1|p.K1225N|1|0.23|ENSG00000133640|chr12:85124187-85124187|A/T|missense_variant'] 26824 16540 FLEHLLFK True H1975_Epitope_Rep2 1045.59605240149 1045.59494993586 68.846 2 -1.496622019066498 0.40790713363497844 1.0 ['ENST00000244364.10_2_6:56323644-56323803:-|nuORF'] 86870 20599 QRRAGNPEP True PC9_epitope_Rep6 1023.5209899682698 1023.5198899358601 91.963 2 -1.4966505374972383 0.40790713363497844 1.0 ['ENST00000552885.2_1_12:80328793-80329330:+|nuORF'] 25789 6716 FFVVFICEYI True H1975_Epitope_Rep3 1278.6358686081398 1278.63476993586 30.789 2 -1.4967765744437131 0.4079489147881918 1.0 ['nc|ENSG00000054611|Q8WUA7-3|TBC1D22A', 'nc|ENSG00000054611|Q8WUA7-4|TBC1D22A', 'ENSG00000054611|ENST00000337137|TBC1D22A', 'nc|ENSG00000054611|Q8WUA7-2|TBC1D22A'] 63659 2378 LPPEVQTRSPW True PC9_epitope_Rep5 1308.68263555976 1308.68098490379 13.181 3 -1.496791534963896 0.40795580110497237 1.0 ['ENST00000368902.1_1_1:151139872-151140700:+|nuORF'] 22173 20513 ETAVKRNYT True PC9_epitope_Rep6 1080.55637241748 1080.55526993586 91.633 2 -1.4968614545005587 0.40797431841444126 1.0 ['MPEG1|p.Y341N|1|0.88|ENSG00000197629|chr11:59211845-59211845|A/T|missense_variant'] 90850 19006 RKVTEKNL True NCI_RA007_Epitope_Rep2 986.58727862294 986.58618993586 78.781 2 -1.4970156756563369 0.4079992556668179 1.0 ['ENST00000291598.11_1_19:56934583-56934625:+|nuORF'] 125445 15499 VLTSRALI True PC9_epitope_Rep2 871.5491022090699 871.54800993586 64.89 2 -1.497018929842016 0.4079992556668179 1.0 ['nc|ENSG00000152128|Q8TC26-3|TMEM163', 'ENST00000476823.1_1_2:135214289-135223802:-|nuORF', 'ENSG00000152128|ENST00000281924|TMEM163'] 92415 25612 RQRVLRVF True NCI_RA007_Epitope_Rep2 1072.6617809758798 1072.66068993586 108.29 2 -1.4970821282461957 0.4079992556668179 1.0 ['ENSG00000183313|ENST00000332249|OR52L1'] 340 5145 AAKANSWLE True PC9_epitope_Rep6 988.4977949121999 988.49668993586 27.513 2 -1.4970977692198117 0.4079992556668179 1.0 ['nc|ENSG00000158816|Q5TIE3-5|VWA5B1', 'ENSG00000158816|ENST00000289815|VWA5B1', 'nc|ENSG00000158816|Q5TIE3|VWA5B1'] 49510 23519 KKEKEKRNEP True NCI_RA007_Epitope_Rep3 1284.7149983171998 1284.71390993586 102.05 2 -1.4971183842884352 0.4079992556668179 1.0 ['ENST00000466622.1_1_7:5028716-5028791:+|nuORF'] 68891 7979 LVENSVETR True PC9_epitope_Rep3 1045.54038800017 1045.53928993586 35.669 2 -1.4971972821577715 0.4079992556668179 1.0 ['LTBP2|p.A1391Lfs*100|1|0.24|ENSG00000119681|chr14:74506054-74506054|C/-|frameshift_variant', 'ENSG00000119681|ENST00000261978|LTBP2'] 90396 15627 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 65.263 3 -1.497280199765826 0.4079992556668179 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 123279 20585 VHSAVLHP True H1975_Epitope_Rep2 858.47118624154 858.47008993586 85.273 2 -1.497381219375205 0.4080061406773353 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 111700 6178 TLPQFMPH True PC9_epitope_Rep4 969.4742230166501 969.47312993586 30.795 2 -1.4974390276965908 0.40800781477131326 1.0 ['LY75|p.Y1401H|1|0.29|ENSG00000054219|chr2:159816985-159816985|A/G|missense_variant'] 35141 23405 GRYSNRLYT True NCI_RA007_Epitope_Rep5 1128.5676058075198 1128.56596490379 97.32 3 -1.4974856331527138 0.40800781477131326 1.0 ['ENSG00000173467|ENST00000310398|AGR3'] 89808 10374 RFFFFFFFFWQ True H1975_Epitope_Rep1 1664.7968774663595 1664.79578993586 44.852 2 -1.4975406568817742 0.40800781477131326 1.0 ['ENST00000335154.9_1_12:50038759-50038969:-|nuORF'] 120623 15184 VGAGTSGG True NCI_RA007_Epitope_Rep5 604.28165413636 604.2811049679301 65.088 1 -1.4975464572468613 0.40800781477131326 1.0 ['ENSG00000259330|ENST00000638170|INAFM2'] 68269 15080 LTRHQKIHTRK True H1975_Epitope_Rep1 1416.84259887216 1416.8415099358601 63.257 2 -1.4975625404942967 0.40800781477131326 1.0 ['ZNF473|p.E516Vfs*14|1|0.34|ENSG00000142528|chr19:50045987-50045990|ATGA/-|frameshift_variant', 'ENSG00000142528|ENST00000270617|ZNF473'] 27929 15776 FQNRRMKWKMV True PC9_epitope_Rep1 1522.80132830714 1522.8002299358602 65.501 2 -1.497568617059791 0.40800781477131326 1.0 ['MEOX2|p.R244M|1|0.61|ENSG00000106511|chr7:15612571-15612571|C/A|missense_variant'] 134104 23271 WRAGSATT True H1975_Epitope_Rep2 848.41406528824 848.41296993586 95.98 2 -1.4976049789607417 0.40800781477131326 1.0 ['ENST00000395066.7_1_15:74907619-74907901:+|nuORF'] 78384 20608 PAVFSGHD True NCI_RA007_Epitope_Rep3 828.3766171503601 828.37552993586 89.767 2 -1.497644943741529 0.40801423305464146 1.0 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'ENST00000546525.5_1_6:170034618-170062491:-|nuORF'] 32484 11287 GGLLAFAK True PC9_epitope_Rep2 775.45922457551 775.45812993586 48.739 2 -1.4977770007765878 0.40801423305464146 1.0 ['ENSG00000062822|ENST00000440232|POLD1', 'ENST00000597963.5_1_19:50919583-50921201:+|nuORF'] 63702 22837 LPQHLSHFVF True PC9_epitope_Rep2 1223.6451278522302 1223.64402993586 93.332 2 -1.4977800617872459 0.40801423305464146 1.0 ['ENSG00000197892|ENST00000524189|KIF13B'] 36826 11816 GVPRKPGM True NCI_RA007_Epitope_Rep3 840.4639926861198 840.46288993586 53.597 2 -1.4978432804490245 0.40801423305464146 1.0 ['ENSG00000146701|ENST00000315758|MDH2', 'nc|ENSG00000146701|P40926-2|MDH2', 'ENST00000461665.5_1_7:75677478-75687456:+|nuORF'] 128446 10771 VSEPGDPKVT True NCI_RA007_Epitope_Rep4 1027.51858992643 1027.51748993586 48.279 2 -1.4978722851037378 0.40801423305464146 1.0 ['ENSG00000031081|ENST00000264245|ARHGAP31'] 37225 10730 GVVDPGKV True H1975_Epitope_Rep3 769.4334037504899 769.43230993586 46.351 2 -1.497876311270306 0.40801423305464146 1.0 ['nc|ENSG00000171931|Q5XX13-3|FBXW10', 'nc|ENSG00000171931|Q5XX13-4|FBXW10', 'ENSG00000171931|ENST00000395665|FBXW10', 'nc|ENSG00000171931|Q5XX13-2|FBXW10'] 121332 12458 VGHPLRNEKYL True PC9_epitope_Rep6 1324.72516907808 1324.7240699358601 59.345 2 -1.4980525440082446 0.4080175791468533 1.0 ['ENSG00000163781|ENST00000260810|TOPBP1'] 46628 7244 ITTPKPEK True NCI_RA007_Epitope_Rep4 912.5280324113198 912.52692993586 34.498 2 -1.4981320971755152 0.4080175791468533 1.0 ['nc|ENSG00000156256|Q9Y5T5-3|USP16', 'nc|ENSG00000156256|Q9Y5T5-2|USP16'] 116237 14870 TVTWIRLGL True PC9_epitope_Rep6 1057.6284151589298 1057.62730993586 69.174 2 -1.4981444872324712 0.4080175791468533 1.0 ['ENST00000361050.3_1_11:58977993-58978113:-|nuORF'] 137483 17840 YLPKLKAFP True NCI_RA007_Epitope_Rep3 1075.6430025939098 1075.6419099358602 78.219 2 -1.498158911907916 0.4080175791468533 1.0 ['ENSG00000121671|ENST00000616080|CRY2', 'nc|ENSG00000121671|Q49AN0-2|CRY2'] 30767 9317 GAPELNGG True NCI_RA007_Epitope_Rep5 713.3344179852099 713.33386496793 42.481 1 -1.4982417761250593 0.4080175791468533 1.0 ['nc|ENSG00000112033|Q03181-4|PPARD', 'nc|ENSG00000112033|Q03181-2|PPARD', 'ENSG00000112033|ENST00000360694|PPARD'] 100931 20251 SLSPEGERAF True PC9_epitope_Rep1 1091.5247379360299 1091.52364993586 82.724 2 -1.4982916793257257 0.4080175791468533 1.0 ['nc|ENSG00000164385|Q96MT4|LINC01600'] 140783 13074 YYRRRHRHERT True H1975_Epitope_Rep1 1628.85087214008 1628.8497699358602 55.377 2 -1.4983504074876557 0.4080175791468533 1.0 ['ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF'] 99619 10062 SLFRLQNQEIP True H1975_Epitope_Rep3 1343.7197493444696 1343.7186499358602 43.741 2 -1.4984028032219199 0.4080175791468533 1.0 ['ENSG00000283434|ENST00000637986|CSNKA2IP'] 69800 21046 LWRRRKWPFDR True H1975_Epitope_Rep1 1614.90078245462 1614.8996899358601 87.413 2 -1.498423551859674 0.4080175791468533 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 63620 23541 LPLTVDHLKQN True PC9_epitope_Rep4 1276.7139356880398 1276.71282993586 98.855 2 -1.4984427794395856 0.4080175791468533 1.0 ['ENSG00000204569|ENST00000376511|PPP1R10'] 59576 21179 LGRQWPDQV True PC9_epitope_Rep5 1097.56179215109 1097.5606899358602 86.516 2 -1.4984821284175203 0.4080175791468533 1.0 ['ENST00000507318.1_1_5:148443832-148443991:+|nuORF'] 52047 24160 KLHRTSRQHR True PC9_epitope_Rep2 1317.74903284049 1317.7473749037902 98.458 3 -1.4984852150119308 0.4080175791468533 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1'] 34074 16360 GNTLTSLK True NCI_RA007_Epitope_Rep1 832.46543215476 832.46432993586 67.749 2 -1.4985354944791274 0.4080175791468533 1.0 ['ENST00000513449.6_2_4:8465778-8469740:+|nuORF'] 63048 4727 LNKLLLLVVP True PC9_epitope_Rep5 1120.75836669932 1120.7572699358602 23.232 2 -1.4985831817950557 0.4080175791468533 1.0 ['ENST00000398985.1_1_17:25887428-25904874:+|nuORF'] 67405 8441 LTEAEKWP True H1975_Epitope_Rep3 972.4916469025999 972.49054993586 37.454 2 -1.4987894020828108 0.40802185665290935 1.0 ['ENSG00000184895|ENST00000383070|SRY'] 90576 23912 RKHQKRKRHLE True PC9_epitope_Rep2 1514.90184508378 1514.90020490379 97.455 3 -1.498813101106246 0.40802185665290935 1.0 ['ENSG00000166432|ENST00000651725|ZMAT1', 'nc|ENSG00000166432|Q5H9K5-2|ZMAT1', 'nc|ENSG00000166432|Q5H9K5|ZMAT1'] 103223 21138 SQRQIRKSR True PC9_epitope_Rep6 1157.67413656473 1157.67302993586 94.154 2 -1.4988144985245102 0.40802185665290935 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 41626 14235 IDHCAPLLFTF True H1975_Epitope_Rep1 1275.63218021003 1275.63108993586 59.935 2 -1.4988312506010095 0.40802185665290935 1.0 ['PTCHD4|p.F810Sfs*25|1|0.13|ENSG00000244694|chr6:47878415-47878415|A/-|frameshift_variant', 'ENSG00000244694|ENST00000339488|PTCHD4', 'nc|ENSG00000244694|Q6ZW05|PTCHD4', 'nc|ENSG00000244694|Q6ZW05-4|PTCHD4'] 119635 8475 VESEGSGIF True H1975_Epitope_Rep2 923.4236269124299 923.42252993586 37.551 2 -1.4988841999553602 0.4080287388392857 1.0 ['nc|nan|Q8N4M7|C10orf126'] 128089 20990 VRRMPPGAE True PC9_epitope_Rep4 1011.5283838478298 1011.52728993586 88.898 2 -1.4990281342439347 0.4080472464745341 1.0 ['ENSG00000140795|ENST00000394809|MYLK3', 'ENST00000564731.5_1_16:46761123-46772038:-|nuORF', 'nc|ENSG00000140795|Q32MK0-4|MYLK3'] 124018 25341 VKLLPLGAT True PC9_epitope_Rep2 910.5851533646199 910.58404993586 103.15 2 -1.4991576743202466 0.4080631473709908 1.0 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A', 'ENST00000526234.1_1_19:17530944-17533268:+|nuORF', 'MVB12A|p.K158Sfs*85|2|0.25|ENSG00000141971|chr19:17423553-17423553|C/-|frameshift_variant'] 100033 7003 SLKHIVENAVQ True NCI_RA007_Epitope_Rep1 1236.68263555976 1236.68152993586 31.238 2 -1.499161448518082 0.4080631473709908 1.0 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENST00000493492.2_1_13:98655270-98659627:+|nuORF'] 34007 24742 GNIRRARKRKY True NCI_RA007_Epitope_Rep5 1416.8538322621998 1416.85272993586 102.66 2 -1.4991639422579102 0.4080631473709908 1.0 ['ENSG00000166707|ENST00000650639|ZCCHC18'] 70449 23828 LYRLRRKLEKN True PC9_epitope_Rep5 1487.9048647755496 1487.90376993586 96.635 2 -1.499220231048916 0.4080631473709908 1.0 ['ENST00000491144.5_1_3:183855641-183858240:+|nuORF'] 115948 10234 TVPRVYVVF True PC9_epitope_Rep5 1078.6175161220597 1078.61640993586 44.353 2 -1.4992605721291556 0.4080769096636946 1.0 ['nc|ENSG00000100503|Q8N4C6-5|NIN'] 13094 21928 DLSEAHFA True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 95.263 2 -1.4992875707725977 0.4080769096636946 1.0 ['ENSG00000099769|ENST00000215539|IGFALS', 'nc|ENSG00000099769|P35858-2|IGFALS'] 79894 17734 PILVMKFI True NCI_RA007_Epitope_Rep1 959.58779621691 959.58724496793 73.121 1 -1.4994287716258192 0.4080837905700735 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 111427 13196 TLKKIKWV True PC9_epitope_Rep2 1014.6589870112199 1014.65788993586 56.036 2 -1.499616285000888 0.40814879395524556 1.0 ['ENSG00000151835|ENST00000382292|SACS', 'SACS|p.G4157Afs*17|1|0.13|ENSG00000151835|chr13:23331406-23331406|C/-|frameshift_variant', 'nc|ENSG00000151835|Q9NZJ4-2|SACS', 'SACS|p.A1723Hfs*2|2|0.39|ENSG00000151835|chr13:23338713-23338713|G/-|frameshift_variant'] 36889 6551 GVQPPNVP True NCI_RA007_Epitope_Rep2 806.4286527232199 806.42754993586 30.094 2 -1.4997042673988257 0.4081684836932518 1.0 ['ENSG00000213079|ENST00000367178|SCAF8', 'nc|ENSG00000213079|Q9UPN6-2|SCAF8'] 13381 23337 DNGNTNAN True H1975_Epitope_Rep2 818.3154734457801 818.3149249679301 96.233 1 -1.4997648450782566 0.4081684836932518 1.0 ['ENST00000555391.5_1_14:104201493-104210315:-|nuORF', 'ENSG00000088808|ENST00000202556|PPP1R13B'] 28638 14652 FSRYWRRWNRF True PC9_epitope_Rep5 1672.8487468817596 1672.84764993586 61.362 2 -1.4998179658085937 0.4081684836932518 1.0 ['nc|ENSG00000151067|Q13936-2|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C', 'CACNA1C|p.E1319Kfs*19|2|0.15|ENSG00000151067|chr12:2651648-2651648|G/-|frameshift_variant', 'CACNA1C|p.F940Lfs*11|1|0.31|ENSG00000151067|chr12:2597252-2597252|T/-|frameshift_variant'] 97925 16487 SHPKRGGG True NCI_RA007_Epitope_Rep4 794.4147339945798 794.41362993586 71.474 2 -1.499843259992144 0.4081684836932518 1.0 ['SVA_C_dup26|chr1:153574460-153575981:+|1.9575035595213544|0.0744788955417672|4.72|476.0|68|3|anti-sense'] 126982 23936 VPWCFYPN True H1975_Epitope_Rep3 1024.4476739156398 1024.44656993586 99.782 2 -1.4998493760654799 0.4081684836932518 1.0 ['ENSG00000160182|ENST00000291527|TFF1'] 66977 13686 LTAADHRQL True PC9_epitope_Rep5 1023.5461420869501 1023.54504993586 57.67 2 -1.49986480872645 0.4081684836932518 1.0 ['ENSG00000268651|ENST00000599837|CTAG1A', 'ENSG00000184033|ENST00000328435|CTAG1B', 'ENSG00000126890|ENST00000369585|CTAG2'] 31035 11933 GAVPPPSPG True H1975_Epitope_Rep1 777.40210362221 777.4015549679301 50.904 1 -1.4998834064554916 0.4081684836932518 1.0 ['ENSG00000081913|ENST00000262719|PHLPP1', 'nc|ENSG00000081913|O60346-2|PHLPP1'] 38690 22196 HHSEEEEE True H1975_Epitope_Rep3 1024.3733822447198 1024.3722899358602 92.819 2 -1.4998859817431516 0.4081684836932518 1.0 ['ENSG00000089154|ENST00000300648|GCN1'] 126486 6350 VPMNSALIKW True PC9_epitope_Rep4 1157.6267009067699 1157.62504490379 31.502 3 -1.4998949469571712 0.4081684836932518 1.0 ['ENSG00000103335|ENST00000301015|PIEZO1'] 10789 7192 DAATIMQPYFT True PC9_epitope_Rep4 1256.5747249035599 1256.57362993586 34.968 2 -1.4999046544893613 0.4081684836932518 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 93663 6584 RTFWYWNYNYY True NCI_RA007_Epitope_Rep2 1674.7255630008997 1674.72391490379 30.222 3 -1.4999265750323425 0.4081684836932518 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 123281 23095 VHSAVLHP True H1975_Epitope_Rep2 858.47118624154 858.47008993586 95.297 2 -1.4999727489404626 0.4081684836932518 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 90990 18107 RLKAGHGG True H1975_Epitope_Rep2 794.4511195032999 794.45002993586 75.036 2 -1.4999844681891428 0.4081684836932518 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 84929 23967 QHVHVGGR True NCI_RA007_Epitope_Rep1 888.4678321965999 888.46672993586 99.196 2 -1.5001066614360425 0.40817536233568497 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2', 'nc|ENSG00000148204|Q5IJ48-3|CRB2'] 133772 25523 WLMVKIFL True PC9_epitope_Rep5 1048.61434531792 1048.6137749679299 103.44 1 -1.500127962301449 0.4081822408182241 1.0 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5'] 58635 9323 LFGDELC[Carbamidomethyl]K True H1975_Epitope_Rep3 980.46371818203 980.46262993586 40.858 2 -1.5001684637685806 0.40821924176564933 1.0 ['CON__P02769'] 20854 9515 EQQRKEVKKDY True H1975_Epitope_Rep3 1449.75759140517 1449.7564899358601 41.605 2 -1.5001723162374532 0.40821924176564933 1.0 ['nc|ENSG00000100461|Q86U06-4|RBM23', 'nc|ENSG00000100461|Q86U06-2|RBM23', 'ENST00000556687.5_1_14:23375339-23380602:-|nuORF', 'nc|ENSG00000100461|Q86U06-3|RBM23', 'ENST00000557667.5_1_14:23373372-23380602:-|nuORF', 'ENSG00000100461|ENST00000359890|RBM23', 'ENST00000556984.5_1_14:23377568-23380602:-|nuORF', 'ENST00000556365.1_1_14:23377855-23380602:-|nuORF', 'ENST00000554955.5_1_14:23375339-23380602:-|nuORF'] 114567 23577 TSKKTGGG True PC9_epitope_Rep2 734.3922672144998 734.39171496793 96.164 1 -1.5003503035163137 0.4082510168506682 1.0 ['ENST00000426393.5_1_1:63786855-63787154:-|nuORF', 'ENST00000418244.5_1_1:63786852-63787391:-|nuORF', 'ENST00000431294.5_1_1:63786852-63789241:-|nuORF'] 11584 18495 DGTIAAITEK True PC9_epitope_Rep5 1017.53423999057 1017.5336749679301 76.164 1 -1.5003907872989832 0.4082510168506682 1.0 ['ENSG00000132164|ENST00000254488|SLC6A11'] 122440 17814 VGSLEVLI True PC9_epitope_Rep6 828.49566965388 828.49456993586 81.153 2 -1.5004199393115445 0.4082510168506682 1.0 ['ENSG00000134061|ENST00000256447|CD180'] 24605 4802 FANSSYLA True NCI_RA007_Epitope_Rep1 871.4075829254699 871.40648993586 22.759 2 -1.5004424580661093 0.4082510168506682 1.0 ['nc|ENSG00000126746|Q8TF68-3|ZNF384', 'nc|ENSG00000126746|Q8TF68-2|ZNF384', 'nc|ENSG00000126746|Q8TF68|ZNF384', 'ENSG00000126746|ENST00000683879|ZNF384', 'ENST00000542519.1_1_12:6782380-6787618:-|nuORF'] 122404 21090 VGSGQAAVP True PC9_epitope_Rep2 784.40791727864 784.4073649679301 86.58 1 -1.5004478125466416 0.4082510168506682 1.0 ['ENST00000401950.6_1_22:30421796-30421910:+|nuORF'] 16679 11093 EETRIPAHL True PC9_epitope_Rep3 1064.5614577979197 1064.56036993586 47.666 2 -1.5004616932122212 0.4082510168506682 1.0 ['ENST00000565137.1_1_16:31498819-31499703:-|nuORF'] 120541 17572 VGAAGRNA True PC9_epitope_Rep6 714.3772858566999 714.37673496793 80.23 1 -1.500555375153647 0.4082510168506682 1.0 ['PYROXD2|p.M563V|1|0.36|ENSG00000119943|chr10:98383857-98383857|T/C|missense_variant'] 78771 16394 PEKDGQMLSP True PC9_epitope_Rep2 1100.51721002744 1100.5161099358602 68.305 2 -1.500597234438485 0.4082510168506682 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS'] 27141 24889 FLRKKQVF True NCI_RA007_Epitope_Rep1 1064.6494849566798 1064.6483899358602 103.02 2 -1.5007040850091715 0.40825314925858786 1.0 ['ENST00000473805.5_1_1:52281970-52293513:-|nuORF'] 17970 18881 EIFPSRIL True PC9_epitope_Rep2 973.5596668927699 973.55856993586 77.991 2 -1.500752011710957 0.40825314925858786 1.0 ['ENST00000555431.5_1_14:67817394-67826415:-|nuORF'] 28113 19937 FREHIQRRHRF True PC9_epitope_Rep5 1580.8548948913597 1580.85325490379 81.742 3 -1.5009083717048326 0.4082948880341185 1.0 ['ENSG00000124226|ENST00000244061|RNF114'] 105297 10779 STTPGKKL True PC9_epitope_Rep1 830.48616759934 830.48506993586 46.349 2 -1.501098435121469 0.4083086398233688 1.0 ['ENSG00000066777|ENST00000262215|ARFGEF1', 'ARFGEF1|p.G169Rfs*74|1|0.21|ENSG00000066777|chr8:67296565-67296566|-/T|frameshift_variant'] 43538 24302 IIDWIPKTL True PC9_epitope_Rep1 1097.6484818971699 1097.64738993586 98.304 2 -1.5011100856138573 0.4083086398233688 1.0 ['NAV3|p.W2221L|1|0.54|ENSG00000067798|chr12:78199478-78199478|G/T|missense_variant'] 78804 6314 PEMLDAML True NCI_RA007_Epitope_Rep1 918.4190762093 918.41796993586 28.585 2 -1.5011923786899093 0.4083155154782932 1.0 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 137715 21408 YMVTHSGD True NCI_RA007_Epitope_Rep5 908.3698175177599 908.36872993586 89.407 2 -1.5012925223462432 0.4083641265193242 1.0 ['ENSG00000177599|ENST00000323169|ZNF491'] 130558 8316 VTYKNSIK True PC9_epitope_Rep1 951.5389314481899 951.53782993586 36.821 2 -1.5013355302258642 0.4083641265193242 1.0 ['nc|ENSG00000132141|Q92526-3|CCT6B', 'nc|ENSG00000132141|Q92526-2|CCT6B', 'ENSG00000132141|ENST00000314144|CCT6B'] 64955 19411 LSCPTCRLT True PC9_epitope_Rep1 992.47832242092 992.47722993586 79.474 2 -1.5014429970549432 0.40836789942719043 1.0 ['ENST00000361999.7_1_2:24438922-24439048:-|nuORF'] 69802 21493 LWRRRKWPFDR True NCI_RA007_Epitope_Rep2 1614.90078245462 1614.8996899358601 88.961 2 -1.501468289984501 0.40836789942719043 1.0 ['nc|ENSG00000159082|O43426-4|SYNJ1', 'ENSG00000159082|ENST00000674351|SYNJ1', 'nc|ENSG00000159082|O43426|SYNJ1'] 45892 13043 ISRCWRPE True PC9_epitope_Rep5 1045.51273378369 1045.5116299358601 55.174 2 -1.5014926595158538 0.40836789942719043 1.0 ['ENST00000563447.1_1_16:2292636-2292951:-|nuORF'] 83919 8131 QEIVTNPPDI True NCI_RA007_Epitope_Rep1 1124.57135377528 1124.5702499358601 35.626 2 -1.5015161867576978 0.40836789942719043 1.0 ['nc|ENSG00000168310|P14316-2|IRF2', 'ENSG00000168310|ENST00000393593|IRF2'] 14437 10403 DTLRLWLI True PC9_epitope_Rep5 1028.6018660579198 1028.6007699358602 45.001 2 -1.501560761816392 0.40836789942719043 1.0 ['ENSG00000164180|ENST00000296595|TMEM161B', 'ENST00000510089.5_1_5:87494777-87494978:-|nuORF'] 121722 23911 VGLREKLHRT True PC9_epitope_Rep3 1207.7149387475497 1207.71384993586 97.26 2 -1.501566863126914 0.40836789942719043 1.0 ['ENST00000588075.5_3_17:76993904-76996331:-|nuORF', 'ENST00000588611.5_1_17:76993706-77001537:-|nuORF', 'ENST00000586916.6_1_17:76993962-76996331:-|nuORF'] 29805 18767 FVTPKVIK True NCI_RA007_Epitope_Rep4 930.5902387450599 930.58914993586 81.191 2 -1.5015689366071825 0.40836789942719043 1.0 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 133781 5925 WLQIRRKDKER True NCI_RA007_Epitope_Rep5 1526.8793783037002 1526.87773490379 29.477 3 -1.5016111159020116 0.40836789942719043 1.0 ['CLMP|p.L255Q|1|0.07|ENSG00000166250|chr11:123074759-123074759|A/T|missense_variant'] 118289 11776 VDARGRHQKK True H1975_Epitope_Rep3 1193.6741365647297 1193.67302993586 50.44 2 -1.5016625729763715 0.40836789942719043 1.0 ['ENSG00000206190|ENST00000555815|ATP10A', 'ENST00000555815.5_1_15:25924490-25961922:-|nuORF'] 36156 4693 GVFFLKFPSDY True NCI_RA007_Epitope_Rep1 1318.65977485686 1318.6581149037902 22.337 3 -1.50176153970447 0.40838116039686784 1.0 ['nc|ENSG00000293307|Q8IWF7|UBE2DNL'] 561 6908 AARALVNL True PC9_epitope_Rep4 826.50248636982 826.5019349679301 33.795 1 -1.5017637586677883 0.40838116039686784 1.0 ['ENST00000530074.1_1_8:145192726-145193642:+|nuORF', 'ENSG00000235173|ENST00000347708|HGH1'] 68295 12843 LTRNRFFENPA True H1975_Epitope_Rep1 1363.69968260623 1363.6985899358601 54.469 2 -1.5017757037947526 0.40838116039686784 1.0 ['nc|ENSG00000170615|P58743-5|SLC26A5', 'nc|ENSG00000170615|P58743-6|SLC26A5', 'ENSG00000170615|ENST00000306312|SLC26A5'] 81384 20872 PPTPLICLLS True PC9_epitope_Rep6 1052.59400379616 1052.59290993586 93.058 2 -1.5017944233636784 0.40838116039686784 1.0 ['DNAH5|p.R4042P|1|0.35|ENSG00000039139|chr5:13721154-13721154|C/G|missense_variant'] 88650 7843 RASWGVRGAQ True PC9_epitope_Rep5 1086.5682745138597 1086.5671699358602 35.111 2 -1.5018142500700775 0.40838116039686784 1.0 ['nc|ENSG00000114626|Q969K4-4|ABTB1'] 63625 18946 LPMLPLFI True NCI_RA007_Epitope_Rep5 942.5612471159 942.56014993586 79.714 2 -1.501865024646409 0.40838116039686784 1.0 ['ENST00000329608.10_2_1:110471647-110471734:+|nuORF'] 120627 19658 VGAHVLYPDV True PC9_epitope_Rep5 1068.56039516876 1068.55928993586 80.671 2 -1.5019401248537771 0.40838116039686784 1.0 ['ENSG00000125878|ENST00000246080|TCF15'] 129660 20739 VTICLRIIA True PC9_epitope_Rep5 1000.6103225666399 1000.60922993586 84.831 2 -1.5020652906675898 0.4083880336915481 1.0 ['ENSG00000188869|ENST00000359440|TMC3', 'nc|ENSG00000188869|Q7Z5M5-2|TMC3', 'ENST00000559982.1_1_15:81630174-81666445:-|nuORF', 'TMC3|p.N768Kfs*17|1|0.27|ENSG00000188869|chr15:81334875-81334875|G/-|frameshift_variant'] 82920 4420 PWFQVLEPQF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 22.013 3 -1.5021346967811735 0.40839016229654845 1.0 ['ENSG00000156966|ENST00000287590|B3GNT7'] 29519 26034 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 110.47 3 -1.5021447723723578 0.40839016229654845 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 34492 7357 GQDTHDLL True PC9_epitope_Rep5 897.4192102383299 897.41810993586 33.257 2 -1.5023304675051203 0.4084086526173935 1.0 ['ENSG00000152463|ENST00000378228|OLAH', 'nc|ENSG00000152463|Q9NV23-2|OLAH'] 85714 8947 QLSHLKQYE True NCI_RA007_Epitope_Rep1 1144.58767254576 1144.58656993586 38.801 2 -1.5023888260157612 0.4084150364760002 1.0 ['ENSG00000130402|ENST00000252699|ACTN4', 'nc|ENSG00000130402|O43707-2|ACTN4', 'nc|ENSG00000130402|O43707-3|ACTN4'] 34335 18404 GPSAAVAF True PC9_epitope_Rep5 718.3649898374999 718.36444496793 75.811 1 -1.5024377372827948 0.4084150364760002 1.0 ['ENST00000550292.1_1_12:30948620-30949103:+|nuORF'] 22035 6316 ESQRQTDSKN True PC9_epitope_Rep2 1191.5479925617499 1191.54634490379 29.692 3 -1.502447637646389 0.4084150364760002 1.0 ['ENSG00000177409|ENST00000318238|SAMD9L'] 106272 9969 SVQPDPASPI True NCI_RA007_Epitope_Rep5 1009.5080252427299 1009.50692993586 44.988 2 -1.5025131820811037 0.4084150364760002 1.0 ['ENSG00000135749|ENST00000258229|PCNX2', 'nc|ENSG00000135749|A6NKB5-2|PCNX2', 'ENST00000324142.4_1_1:233337898-233388268:-|nuORF', 'nc|ENSG00000135749|A6NKB5-5|PCNX2', 'ENST00000475463.6_1_1:233201380-233353905:-|nuORF'] 21746 9933 ESAYPPRLSW True NCI_RA007_Epitope_Rep1 1204.58767254576 1204.58656993586 42.641 2 -1.502534642402111 0.4084150364760002 1.0 ['ENSG00000186364|ENST00000334513|NUDT17'] 88694 16941 RCLPTKDLWWH True NCI_RA007_Epitope_Rep1 1453.72887455953 1453.7277699358601 70.025 2 -1.5025532022338208 0.4084150364760002 1.0 ['ENST00000340990.9_1_1:202920095-202927322:-|nuORF', 'ENST00000426229.1_2_1:202920095-202923414:-|nuORF'] 29561 25458 FVIFMFFLN True PC9_epitope_Rep4 1176.6041745570399 1176.60253490379 106.89 3 -1.502572654392442 0.40841716423111774 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 82837 16116 PVSVQIPTG True PC9_epitope_Rep1 896.4967322830399 896.49618496793 66.806 1 -1.5025864755551106 0.40841716423111774 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1', 'ENST00000549154.1_1_12:53683840-53684149:+|nuORF'] 18528 7472 EKRHCWMKQFK True NCI_RA007_Epitope_Rep5 1519.7540437615496 1519.7529499358602 35.422 2 -1.5026828828806051 0.4084356523052261 1.0 ['nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1', 'ENST00000525971.6_1_12:85431954-85518298:+|nuORF', 'ENST00000529408.1_1_12:85431954-85441296:+|nuORF', 'LRRIQ1|p.E537Kfs*5|1|0.26|ENSG00000133640|chr12:85056397-85056397|A/-|frameshift_variant', 'LRRIQ1|p.A815Qfs*16|1|0.29|ENSG00000133640|chr12:85065312-85065312|G/-|frameshift_variant'] 5818 25046 APFPHSGL True PC9_epitope_Rep5 824.41808803952 824.41698993586 101.48 2 -1.5027616331627127 0.4084541399498188 1.0 ['ENSG00000205022|ENST00000419291|PABPN1L', 'nc|ENSG00000205022|A6NDY0-4|PABPN1L'] 42740 20211 IFDRELHRQTG True PC9_epitope_Rep2 1370.7054962626598 1370.70438993586 83.159 2 -1.5029939008654811 0.4085190907084529 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2', 'chr1:183207943-183215453|223|30.46|0.17|7.49|+|2|None,LAMC2|1'] 59496 23627 LGPKSKVSRHL True PC9_epitope_Rep1 1220.7353398389598 1220.7342499358601 95.674 2 -1.50301426138042 0.4085375769543501 1.0 ['ENST00000508684.5_1_4:2877642-2900342:+|nuORF', 'ENST00000506157.1_1_4:2889441-2900342:+|nuORF'] 6663 8526 AQAHTSAPTPA True PC9_epitope_Rep1 1050.50942222506 1050.50832993586 37.633 2 -1.5030485513371732 0.40854444715475485 1.0 ['ENSG00000283439|ENST00000636696|SPEM3'] 79896 17120 PILVMKFI True NCI_RA007_Epitope_Rep5 959.58779621691 959.58724496793 72.623 1 -1.5034074224493892 0.4086210100822376 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 79961 11220 PISVSWFHEGN True NCI_RA007_Epitope_Rep1 1271.5934862021898 1271.5923899358602 47.641 2 -1.5034709118631597 0.40863212423197093 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant'] 54644 14805 LADRAIRWQR True NCI_RA007_Epitope_Rep2 1283.7210867571498 1283.7199899358602 62.264 2 -1.5034817033326315 0.40863212423197093 1.0 ['ENSG00000176058|ENST00000409012|TPRN', 'nc|ENSG00000176058|Q4KMQ1-2|TPRN', 'nc|ENSG00000176058|Q4KMQ1-4|TPRN', 'nc|ENSG00000176058|Q4KMQ1-3|TPRN'] 57244 25192 LEFLKVYEK True PC9_epitope_Rep1 1167.6539612004299 1167.65230490379 101.78 3 -1.5034965159998495 0.40863212423197093 1.0 ['ENSG00000165140|ENST00000375326|FBP1'] 108015 8426 TDAYHPIITN True H1975_Epitope_Rep1 1143.5560380643099 1143.5549499358601 37.338 2 -1.5035021846519352 0.40863212423197093 1.0 ['nc|ENSG00000111452|Q6QNK2-4|ADGRD1', 'ENSG00000111452|ENST00000261654|ADGRD1'] 1994 19473 AEKLKELQNEV True PC9_epitope_Rep6 1299.7034305739899 1299.70232993586 87.566 2 -1.503561698547007 0.40863212423197093 1.0 ['nc|ENSG00000258643|Q92843-2|BCL2L2', 'ENSG00000258643|ENST00000678502|BCL2L2-PABPN1', 'ENST00000556809.1_1_14:23791392-23792332:+|nuORF', 'nc|ENSG00000100836|Q86U42-2|PABPN1', 'ENSG00000100836|ENST00000216727|PABPN1'] 11425 10877 DFPLSQNCCK True PC9_epitope_Rep1 1153.48961538061 1153.48850993586 46.723 2 -1.5036761365108084 0.4086522269322339 1.0 ['ENST00000597450.1_1_2:136757602-136764807:+|nuORF'] 136343 6946 YHCNQCGKAF True NCI_RA007_Epitope_Rep3 1169.4746340228096 1169.47407496793 34.428 1 -1.5037495483062995 0.4086522269322339 1.0 ['nc|ENSG00000291239|Q3ZCX4-2|ZNF568', 'ENSG00000198453|ENST00000333987|ZNF568'] 124011 26285 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 108.7 1 -1.5037544763194923 0.4086522269322339 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 73309 6979 NEKVRYIV True PC9_epitope_Rep4 1019.57637958607 1019.57528993586 34.088 2 -1.5038453196434534 0.4086522269322339 1.0 ['ENST00000467199.5_1_7:2274501-2274588:-|nuORF'] 134543 18029 WVKAIGRKA True PC9_epitope_Rep6 1027.6290838652699 1027.6279899358601 81.978 2 -1.5039380916174483 0.4086522269322339 1.0 ['ENSG00000136197|ENST00000350427|C7orf25', 'nc|nan|Q9BPX7-2|C7orf25'] 131670 19869 VWLKKFSLGDF True NCI_RA007_Epitope_Rep5 1338.7336085034597 1338.7325099358602 83.339 2 -1.5039513019966868 0.4086522269322339 1.0 ['ENSG00000101890|ENST00000218006|GUCY2F'] 128666 13906 VSLSQPRTL True PC9_epitope_Rep4 999.5712942056299 999.57018993586 61.393 2 -1.5039622218653645 0.4086522269322339 1.0 ['ENSG00000090006|ENST00000396819|LTBP4', 'nc|ENSG00000090006|Q8N2S1-3|LTBP4', 'nc|ENSG00000090006|Q8N2S1|LTBP4', 'ENST00000595529.1_1_19:41112383-41114583:+|nuORF'] 64683 18544 LRKSERPRWTL True NCI_RA007_Epitope_Rep4 1440.8313654821197 1440.83026993586 80.239 2 -1.503970686862898 0.4086522269322339 1.0 ['ENST00000204005.13_1_19:41111557-41112187:+|nuORF'] 45551 9239 ISGGAMGG True H1975_Epitope_Rep1 648.29011064508 648.28956496793 40.448 1 -1.5040958147839056 0.40866596211690104 1.0 ['ENST00000469204.1_1_10:73111448-73116001:+|nuORF', 'nc|ENSG00000198246|Q9BZD2-2|SLC29A3', 'ENSG00000198246|ENST00000373189|SLC29A3'] 69587 964 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 5.0481 3 -1.5041353558589674 0.40866596211690104 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 56241 11565 LDPWQNPVP True PC9_epitope_Rep1 1064.52909504048 1064.5279899358602 49.363 2 -1.5042478992849877 0.4086960561155758 1.0 ['ENST00000372007.9_2_X:110339616-110346458:+|nuORF'] 35325 9578 GSVKPIYKKG True NCI_RA007_Epitope_Rep2 1075.6389798426299 1075.6378899358601 41.87 2 -1.5043444712350778 0.4087166564085889 1.0 ['ENSG00000096080|ENST00000372133|MRPS18A', 'nc|ENSG00000096080|Q9NVS2-2|MRPS18A'] 130519 5067 VTWHVPIDCIL True NCI_RA007_Epitope_Rep1 1294.6743793751798 1294.6727249037901 23.794 3 -1.5043627161408315 0.4087166564085889 1.0 ['ENST00000518622.5_1_19:48714695-48714965:-|nuORF'] 44236 12128 ILSTMLTLTF True PC9_epitope_Rep3 1138.6307832277 1138.6296899358601 51.692 2 -1.5043774193538382 0.4087166564085889 1.0 ['ENSG00000164744|ENST00000297325|SUN3'] 62268 13782 LLQKEEKDREK True H1975_Epitope_Rep3 1414.7779924965796 1414.77688993586 58.316 2 -1.5044159330492421 0.40872352285395763 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 81098 19418 PPGGGSGG True NCI_RA007_Epitope_Rep4 584.25543938852 584.25489496793 83.958 1 -1.5044358520051293 0.40872513614881734 1.0 ['ENSG00000169047|ENST00000305123|IRS1', 'IRS1|p.H598Tfs*38|1|0.13|ENSG00000169047|chr2:226796948-226796948|C/-|frameshift_variant', 'IRS1|p.Q1064Tfs*17|1|0.18|ENSG00000169047|chr2:226795553-226795554|-/C|frameshift_variant'] 121040 19039 VGFKNLAL True PC9_epitope_Rep5 860.5119884243599 860.51088993586 78.262 2 -1.5044592916126842 0.40872513614881734 1.0 ['ENST00000474944.5_1_8:94767142-94822123:+|nuORF', 'ENSG00000164953|ENST00000453321|TMEM67'] 120777 19425 VGCGFCGK True H1975_Epitope_Rep1 769.3251162548099 769.3245649679301 80.902 1 -1.5044995816432742 0.40872513614881734 1.0 ['UGT2A3|p.Q331Tfs*23|1|0.24|ENSG00000135220|chr4:68932633-68932634|-/T|frameshift_variant', 'ENSG00000135220|ENST00000251566|UGT2A3'] 118438 7355 VDPSFLAA True NCI_RA007_Epitope_Rep5 818.4174193331799 818.41632993586 34.971 2 -1.504545712553233 0.40872513614881734 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 24665 13860 FASVVDGAFSY True PC9_epitope_Rep6 1161.5342399905699 1161.5331499358601 65.134 2 -1.5045824036269349 0.40872513614881734 1.0 ['ENSG00000151229|ENST00000280871|SLC2A13'] 126376 10916 VPLDTLKGL True PC9_epitope_Rep5 954.57498260374 954.57388993586 46.978 2 -1.5046198084373856 0.40872513614881734 1.0 ['ENST00000505303.5_1_5:110428043-110447004:+|nuORF', 'nc|ENSG00000134987|Q8NI36|WDR36', 'ENST00000515784.1_1_5:110428046-110430680:+|nuORF'] 98295 12468 SIFNTWLWYKQ True H1975_Epitope_Rep1 1484.7452358163202 1484.7441299358602 52.996 2 -1.5046394470961033 0.40872513614881734 1.0 ['nc|ENSG00000211814|P0DPF4|TRAV35'] 37862 12494 HDSLFLAC True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 54.716 2 -1.5047027012060892 0.40873412136271803 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 16634 18769 EESMKSKSDI True NCI_RA007_Epitope_Rep5 1152.5332540144 1152.53161490379 79.028 3 -1.504753649690499 0.40873412136271803 1.0 ['ENSG00000170264|ENST00000404929|FAM161A', 'nc|ENSG00000170264|Q3B820|FAM161A', 'nc|ENSG00000170264|Q3B820-2|FAM161A'] 104704 9250 STCVLEFEM True H1975_Epitope_Rep1 1057.4460192331298 1057.44492993586 40.491 2 -1.504780516412653 0.40873412136271803 1.0 ['PCDHGB3|p.L668Ffs*7|1|0.34|ENSG00000262209|chr5:141372395-141372396|-/T|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 112727 12270 TPIGTDRNHN True H1975_Epitope_Rep1 1123.5370339552298 1123.5359299358602 52.22 2 -1.504796893408887 0.40874098672828396 1.0 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B'] 39037 18266 HKPGLKKHPAA True NCI_RA007_Epitope_Rep4 1182.69856040742 1182.69691490379 79.006 3 -1.5048535414057782 0.40874785193442015 1.0 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'nc|ENSG00000181220|Q6NUN9-3|ZNF746'] 34997 26263 GRALWHLRLA True NCI_RA007_Epitope_Rep5 1191.69889476059 1191.6972449037899 108.61 3 -1.5049357765952487 0.40876632801161106 1.0 ['ENSG00000141933|ENST00000359315|TPGS1', 'nc|ENSG00000141933|Q6ZTW0-2|TPGS1', 'ENST00000588278.1_1_19:507506-508034:+|nuORF'] 89941 17182 RFVRRLLYF True NCI_RA007_Epitope_Rep4 1268.75059598028 1268.74948993586 74.407 2 -1.5051036530066664 0.4088053965563283 1.0 ['ENSG00000164327|ENST00000357387|RICTOR', 'nc|ENSG00000164327|Q6R327-3|RICTOR'] 55927 9707 LDGWAFGWWLV True H1975_Epitope_Rep1 1348.6604435631998 1348.65934993586 42.265 2 -1.5051220162783918 0.4088053965563283 1.0 ['ENST00000591996.1_1_17:76416381-76416633:+|nuORF'] 2873 7030 AEYMNHLTDIG True PC9_epitope_Rep6 1262.56013746858 1262.55904993586 36.042 2 -1.5051367306538703 0.4088053965563283 1.0 ['AMY2A|p.I202T|2|0.08|ENSG00000243480|chr1:103619645-103619645|T/C|missense_variant'] 27497 12158 FPEHHKMILDL True PC9_epitope_Rep4 1378.7067421326199 1378.70564993586 54.583 2 -1.5051608126521392 0.4088053965563283 1.0 ['ZNF131|p.R23L|1|0.17|ENSG00000172262|chr5:43122121-43122121|G/T|missense_variant'] 130052 17466 VTPYRLHVL True PC9_epitope_Rep4 1096.6393141958001 1096.63820993586 75.18 2 -1.5052457847404608 0.40881226053639846 1.0 ['ENSG00000070061|ENST00000374647|ELP1'] 69404 8261 LVQQQHVED True NCI_RA007_Epitope_Rep1 1094.5356369729 1094.53452993586 36.132 2 -1.5054998997413132 0.40886030393443 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF', 'nc|ENSG00000114841|Q9P2D7-3|DNAH1', 'ENST00000497875.1_1_3:52356446-52387784:+|nuORF'] 63758 13455 LPRRDFQRQVW True H1975_Epitope_Rep1 1499.8109643907098 1499.8098699358602 56.871 2 -1.505557783939934 0.40886030393443 1.0 ['ENSG00000177272|ENST00000369769|KCNA3'] 30929 11706 GASGGGGD True NCI_RA007_Epitope_Rep5 576.21396849936 576.2134249679301 51.68 1 -1.5055636064989895 0.40886030393443 1.0 ['ENST00000521689.5_1_8:98881135-98900426:+|nuORF'] 85184 7893 QKEDRYEEATE True NCI_RA007_Epitope_Rep2 1396.61065238796 1396.60954993586 35.333 2 -1.5055656894782212 0.40886030393443 1.0 ['ENST00000397772.2_1_20:32500135-32500381:-|nuORF'] 13277 8336 DLWLLPLPA True NCI_RA007_Epitope_Rep2 1036.5957180483197 1036.5946299358602 37.065 2 -1.505666045134811 0.40886030393443 1.0 ['ENST00000419841.2_2_7:99754495-99754932:-|nuORF'] 68395 11546 LTSTPSPRSWP True H1975_Epitope_Rep3 1227.6247863304698 1227.62368993586 49.539 2 -1.5056731524558034 0.40886030393443 1.0 ['ENST00000497897.5_1_7:73151846-73153108:-|nuORF'] 60805 25415 LKILIHIGH True PC9_epitope_Rep5 1042.6651350208201 1042.66402993586 102.99 2 -1.5056792316486418 0.40886030393443 1.0 ['ENSG00000128052|ENST00000263923|KDR'] 124548 14958 VLGHLPSG True PC9_epitope_Rep2 778.43373810366 778.43264993586 62.795 2 -1.5057179022364588 0.40886453605135764 1.0 ['ENST00000228567.7_1_12:33579267-33592494:-|nuORF'] 121846 5934 VGNSSWYLY True PC9_epitope_Rep3 1087.49746055903 1087.49636993586 27.885 2 -1.5057629736227458 0.40886453605135764 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1', 'ATP8B1|p.L459Hfs*8|1|0.19|ENSG00000081923|chr18:57688351-57688352|GA/-|frameshift_variant'] 87744 16392 QVFLKPWIF True NCI_RA007_Epitope_Rep5 1176.6695516949196 1176.66844993586 69.806 2 -1.5057659745096919 0.40886453605135764 1.0 ['nc|ENSG00000167920|Q8N816-2|KRT10-AS1', 'nc|ENSG00000167920|Q8N816|KRT10-AS1'] 16793 6258 EFIEIDRWEQE True H1975_Epitope_Rep1 1492.6834234054002 1492.68232993586 29.14 2 -1.505769391716233 0.40886453605135764 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 31306 10558 GDYQCLLHGSK True H1975_Epitope_Rep3 1219.56555720219 1219.56444993586 45.678 2 -1.505811996778972 0.40888300712776576 1.0 ['GRIN2B|p.D1394Y|1|0.08|ENSG00000273079|chr12:13563058-13563058|C/A|missense_variant'] 32470 25725 GGKAALAPA True PC9_epitope_Rep1 754.43373810366 754.4331849679301 104.0 1 -1.5059149355031407 0.40891045434494927 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 57575 16885 LELERLHPI True PC9_epitope_Rep1 1118.64479349906 1118.64368993586 69.773 2 -1.5059201722400548 0.40891045434494927 1.0 ['ENST00000610158.1_1_10:25242209-25242413:+|nuORF'] 98980 18357 SKKDRVTVV True H1975_Epitope_Rep3 1030.61349337078 1030.6123899358602 76.946 2 -1.5059966776717038 0.40891045434494927 1.0 ['ENSG00000163466|ENST00000315717|ARPC2'] 122325 13274 VGRWAGDW True H1975_Epitope_Rep3 945.4456997696898 945.44460993586 56.315 2 -1.5060352569845348 0.40891045434494927 1.0 ['ENST00000485822.1_1_9:116343414-116343474:+|nuORF'] 124713 25073 VLKIKPNRFP True PC9_epitope_Rep5 1210.75501265438 1210.75390993586 101.58 2 -1.5061698475882686 0.4089637480121188 1.0 ['ENST00000503790.6_1_5:49961779-49961854:+|nuORF'] 103219 18506 SQRQIRKSR True NCI_RA007_Epitope_Rep4 1157.67413656473 1157.67302993586 80.096 2 -1.5061882493795766 0.408965861472565 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 28735 8119 FSWFWFRLYWF True H1975_Epitope_Rep1 1683.8026911227896 1683.8010449037902 36.175 3 -1.5062060150349235 0.408965861472565 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 80887 22816 PLWRRMSPM True PC9_epitope_Rep4 1172.59468958584 1172.59358993586 95.983 2 -1.506248901303473 0.408979582361203 1.0 ['ENST00000464419.5_1_X:153678394-153678581:+|nuORF'] 82013 7501 PSTATKIHSP True PC9_epitope_Rep1 1037.55055876105 1037.54946993586 33.67 2 -1.5063947084377662 0.408979582361203 1.0 ['ENSG00000033030|ENST00000633063|ZCCHC8', 'nc|ENSG00000033030|Q6NZY4-2|ZCCHC8'] 62064 8713 LLMMVLEK True PC9_epitope_Rep3 975.5496964560299 975.54858993586 38.468 2 -1.506658930415583 0.4090793016993221 1.0 ['ENST00000466893.5_1_3:62262228-62262333:-|nuORF'] 55378 13160 LASPRPIL True PC9_epitope_Rep1 865.53853752537 865.53744993586 55.484 2 -1.5066927869556617 0.40910937518136337 1.0 ['ENSG00000185133|ENST00000331075|INPP5J'] 32473 24809 GGKAALAPA True PC9_epitope_Rep4 754.43373810366 754.4331849679301 103.93 1 -1.5067557995508396 0.40912784084314135 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 112519 6395 TPAAGSGFP True PC9_epitope_Rep1 803.38136817763 803.38026993586 29.407 2 -1.5068650270089345 0.40913205970426425 1.0 ['ENSG00000105738|ENST00000222345|SIPA1L3'] 86554 24739 QRAPKPLPRV True PC9_epitope_Rep6 1160.71421047156 1160.71310993586 109.76 2 -1.5068959917773905 0.40913205970426425 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 32471 25520 GGKAALAPA True PC9_epitope_Rep2 754.43373810366 754.4331849679301 103.84 1 -1.5069350388250937 0.40913205970426425 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 10362 18702 CITPKRRLTR True NCI_RA007_Epitope_Rep3 1242.7342942931398 1242.73264490379 81.796 3 -1.5069444518462631 0.40913205970426425 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 83306 21768 QAKRHIHQHRQ True NCI_RA007_Epitope_Rep1 1437.78139559793 1437.78028993586 89.094 2 -1.5072615889227803 0.40920380687093777 1.0 ['nc|ENSG00000054523|O60333-3|KIF1B'] 107867 8740 TASIELRVTSL True NCI_RA007_Epitope_Rep2 1188.6714021697198 1188.6703099358601 38.643 2 -1.5072634488211754 0.40920380687093777 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 52568 26365 KPTWDIFKQF True NCI_RA007_Epitope_Rep5 1308.6866583110398 1308.68500490379 109.0 3 -1.5074651849085317 0.4092196276867369 1.0 ['ENSG00000090402|ENST00000264382|SI'] 139226 14922 YSYRQRERERE True H1975_Epitope_Rep3 1570.76005101666 1570.75894993586 62.784 2 -1.5074700476410408 0.4092196276867369 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 30149 21372 FYRKEWPLL True PC9_epitope_Rep6 1250.6811790077797 1250.68008993586 95.082 2 -1.5074703484069412 0.4092196276867369 1.0 ['ENSG00000138375|ENST00000357276|SMARCAL1'] 27804 6167 FQERNREHERH True PC9_epitope_Rep1 1536.7294195947197 1536.72778490379 28.536 3 -1.5074948494085845 0.4092196276867369 1.0 ['ENSG00000149532|ENST00000439958|CPSF7', 'nc|ENSG00000149532|Q8N684|CPSF7', 'nc|ENSG00000149532|Q8N684-3|CPSF7', 'ENST00000537641.5_1_11:61178417-61183276:-|nuORF'] 80940 21738 PMQQPRKIKQM True NCI_RA007_Epitope_Rep2 1383.74789575195 1383.74678993586 90.069 2 -1.5075856135792558 0.40926815681359235 1.0 ['ENST00000533826.1_1_11:126278346-126283345:+|nuORF'] 108691 12199 TELTIESEA True PC9_epitope_Rep5 991.4709710276699 991.46986993586 51.909 2 -1.5075964225769216 0.40926815681359235 1.0 ['ENST00000398849.6_1_17:28942955-28960136:+|nuORF'] 30447 6929 GAGDHRCA True NCI_RA007_Epitope_Rep2 785.32387038485 785.32276993586 31.572 2 -1.5077107084156458 0.4093214339596365 1.0 ['ENST00000526142.5_1_11:419653-429752:-|nuORF'] 36873 21644 GVQGQTPA True PC9_epitope_Rep6 756.3766171503598 756.37606496793 96.139 1 -1.5077387132592155 0.4093235386275807 1.0 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant'] 103221 23105 SQRQIRKSR True PC9_epitope_Rep1 1157.67413656473 1157.67302993586 93.675 2 -1.5077451839099114 0.4093235386275807 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 62880 27537 LMRKDKKK True H1975_Epitope_Rep1 1045.6430196772499 1045.6419299358602 115.59 2 -1.5078261932754295 0.4093419983753046 1.0 ['ENSG00000196284|ENST00000371459|SUPT3H', 'nc|ENSG00000196284|O75486-4|SUPT3H'] 65971 12384 LSLRQVSHPRR True H1975_Epitope_Rep3 1347.7847496428699 1347.78364993586 52.821 2 -1.5078671315662844 0.40934410249268904 1.0 ['ENST00000545054.6_1_14:24563583-24563937:+|nuORF'] 99883 7059 SLHNAHHV True PC9_epitope_Rep3 913.45184777929 913.45074993586 32.162 2 -1.5079671449777126 0.40934410249268904 1.0 ['MAP2|p.D1744H|1|0.71|ENSG00000078018|chr2:209729924-209729924|G/C|missense_variant'] 32035 12531 GEVIIPKE True H1975_Epitope_Rep3 883.5014833103099 883.5009349679301 53.397 1 -1.507987264090902 0.40935095679621225 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 32133 10584 GFAFAWKCL True PC9_epitope_Rep4 1041.51060852537 1041.50950993586 48.452 2 -1.508034232435602 0.4093551643710039 1.0 ['ENSG00000149716|ENST00000279147|LTO1', 'ENST00000569105.5_1_11:69468929-69488043:-|nuORF'] 13826 7795 DQVVVDNVFPN True NCI_RA007_Epitope_Rep1 1244.6037165327198 1244.60260993586 34.311 2 -1.5080431366593336 0.4093551643710039 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 29925 26416 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 109.33 3 -1.508064077925247 0.4093551643710039 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 128159 25475 VRSKGRKF True PC9_epitope_Rep3 976.5930327097199 976.5924849679301 103.43 1 -1.5080653155759005 0.4093551643710039 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 43769 23440 IIYLKKPM True PC9_epitope_Rep2 1004.60925993748 1004.60816993586 95.633 2 -1.5080783139781972 0.4093620181484834 1.0 ['ENST00000480294.1_1_6:10891760-10930631:+|nuORF', 'ENSG00000153157|ENST00000283141|SYCP2L'] 111445 5897 TLKTQVYMLS True PC9_epitope_Rep4 1182.6318458568599 1182.6301949037902 29.583 3 -1.5081938631647493 0.4094036830318291 1.0 ['ENST00000584875.1_1_18:18548690-18549151:-|nuORF'] 87803 6719 QVIFQLRA True PC9_epitope_Rep2 973.5709002828098 973.56980993586 31.256 2 -1.5082582626763021 0.4094052398301348 1.0 ['nc|ENSG00000059145|Q9H9P5|UNKL', 'nc|ENSG00000059145|Q9H9P5-2|UNKL'] 190 13920 AAFAPFGR True PC9_epitope_Rep5 835.4340724568299 835.43296993586 58.564 2 -1.5082855870021468 0.4094052398301348 1.0 ['nc|ENSG00000116001|P31483-2|TIA1', 'ENSG00000116001|ENST00000433529|TIA1', 'nc|ENSG00000116001|P31483-3|TIA1', 'ENST00000477044.6_1_2:70451646-70455482:-|nuORF'] 66252 7265 LSPWPEFYAYW True H1975_Epitope_Rep1 1457.66558851329 1457.66448993586 32.954 2 -1.5082892745725713 0.4094052398301348 1.0 ['nc|ENSG00000050426|Q6P1Q0-3|LETMD1', 'ENST00000380135.7_1_12:51451801-51451852:+|nuORF', 'ENST00000551931.5_1_12:51449776-51451852:+|nuORF', 'ENST00000546814.1_1_12:51450080-51451852:+|nuORF', 'ENST00000547555.5_1_12:51442173-51451852:+|nuORF'] 45588 9448 ISGNMKMQ True H1975_Epitope_Rep1 907.42555857207 907.42446993586 41.257 2 -1.5083208986151655 0.4094052398301348 1.0 ['ENST00000396953.6_2_3:12882387-12882978:-|nuORF'] 4518 21323 AKPGGFGMG True PC9_epitope_Rep6 820.3901590395199 820.38906993586 94.879 2 -1.5083595662485831 0.4094052398301348 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 113822 24614 TREAVGTG True H1975_Epitope_Rep3 789.3980808709299 789.39753496793 102.41 1 -1.508384314812312 0.4094052398301348 1.0 ['CON__A3EZ82', 'ENSG00000161249|ENST00000339686|DMKN', 'nc|ENSG00000161249|Q6E0U4-2|DMKN', 'nc|ENSG00000161249|Q6E0U4-16|DMKN', 'CON__A3EZ79', 'nc|ENSG00000161249|Q6E0U4-4|DMKN', 'nc|ENSG00000161249|Q6E0U4-7|DMKN', 'nc|ENSG00000161249|Q6E0U4-5|DMKN', 'nc|ENSG00000161249|Q6E0U4-6|DMKN', 'nc|ENSG00000161249|Q6E0U4-3|DMKN'] 70663 287 MCTNKRRHAW True H1975_Epitope_Rep1 1301.62336394517 1301.62171490379 1.5147 3 -1.5084204172703248 0.4094052398301348 1.0 ['ENST00000514654.5_1_3:130694284-130698131:+|nuORF'] 69445 18417 LVRPWEGTKRR True NCI_RA007_Epitope_Rep4 1396.80515073428 1396.8034949037901 79.704 3 -1.5084682937544962 0.4094141943867547 1.0 ['nc|ENSG00000148331|Q9NWX5-2|ASB6'] 30377 15443 GAERDGKN True H1975_Epitope_Rep3 845.3991435000898 845.3985949679301 64.815 1 -1.5085365852083725 0.4094141943867547 1.0 ['nc|ENSG00000184432|P35606-2|COPB2', 'ENSG00000184432|ENST00000333188|COPB2'] 15803 15750 EDHELIYC True NCI_RA007_Epitope_Rep5 1020.42224701344 1020.42114993586 67.299 2 -1.5085578355513347 0.4094141943867547 1.0 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 19917 5134 ELYDYMFF True H1975_Epitope_Rep2 1126.4681345766999 1126.46647490379 24.825 3 -1.5085802020762393 0.4094210465251189 1.0 ['ENST00000265085.9_1_5:173386035-173386122:+|nuORF'] 115958 8574 TVPVPPAA True PC9_epitope_Rep1 750.42759009406 750.42648993586 37.817 2 -1.508629719162505 0.40942789850448424 1.0 ['WNK2|p.S2101Rfs*23|1|0.26|ENSG00000165238|chr9:93300126-93300127|GT/-|frameshift_variant', 'ENSG00000165238|ENST00000427277|WNK2', 'nc|ENSG00000165238|Q9Y3S1-2|WNK2', 'nc|ENSG00000165238|Q9Y3S1-4|WNK2', 'nc|ENSG00000165238|Q9Y3S1|WNK2', 'WNK2|p.N1970Qfs*47|1|0.48|ENSG00000165238|chr9:93297934-93297935|-/C|frameshift_variant'] 67893 17612 LTKRPRYLV True PC9_epitope_Rep1 1144.70806246196 1144.7069699358601 72.537 2 -1.5086523282740025 0.409457954334509 1.0 ['ENST00000549469.1_1_2:176973927-176983694:+|nuORF'] 128160 25557 VRSKGRKF True PC9_epitope_Rep3 976.5930327097199 976.5924849679301 103.79 1 -1.5087375887440728 0.40946480572668315 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000549533.1_1_19:49118631-49119324:-|nuORF', 'ENST00000552347.5_1_19:49118631-49119489:-|nuORF', 'ENST00000416734.1_1_7:121080890-121081274:-|nuORF'] 73083 10347 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 44.809 1 -1.5088133618071122 0.40948325869550084 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 117378 9170 VACAQRQV True PC9_epitope_Rep6 873.4490708979698 873.44796993586 45.399 2 -1.5088980456211079 0.4095133128371715 1.0 ['ENST00000374694.2_1_10:35928201-35929404:-|nuORF'] 62460 11531 LLSLHGGP True PC9_epitope_Rep5 792.4493881678 792.44828993586 49.35 2 -1.508997209442356 0.4095270137011729 1.0 ['ENST00000433948.5_2_12:50189219-50189822:-|nuORF'] 128946 12374 VSVFPGARLL True NCI_RA007_Epitope_Rep4 1057.6284151589298 1057.62730993586 54.593 2 -1.5089982012327479 0.4095270137011729 1.0 ['nc|ENSG00000142453|Q86X55-1|CARM1', 'ENSG00000142453|ENST00000327064|CARM1', 'nc|ENSG00000142453|Q86X55-2|CARM1'] 104585 12197 SSSSSSSF True PC9_epitope_Rep5 774.3031774265801 774.30208993586 51.905 2 -1.5090820501615034 0.40955176093916756 1.0 ['nc|ENSG00000172915|Q8NFP9|NBEA', 'ENSG00000172915|ENST00000379939|NBEA', 'ENSG00000126368|ENST00000246672|NR1D1', 'nc|ENSG00000116731|Q13029-5|PRDM2', 'nc|ENSG00000116731|Q13029-3|PRDM2', 'nc|ENSG00000116731|Q13029-2|PRDM2', 'ENSG00000116731|ENST00000311066|PRDM2', 'ENSG00000283434|ENST00000637986|CSNKA2IP', 'nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'ENST00000475957.1_1_9:20363472-20620706:-|nuORF', 'nc|ENSG00000171843|P42568-2|MLLT3', 'ENSG00000171843|ENST00000380338|MLLT3', 'nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 69125 15960 LVLGKKVG True PC9_epitope_Rep6 812.5483739330799 812.54726993586 73.688 2 -1.5091140548328572 0.40955176093916756 1.0 ['ENST00000237172.11_1_6:76203241-76203376:-|nuORF'] 28507 12439 FSGNLIKDD True NCI_RA007_Epitope_Rep4 1007.4923751785899 1007.49126993586 54.853 2 -1.5091354577884124 0.40955176093916756 1.0 ['ENST00000554643.5_1_12:57146314-57157040:+|nuORF'] 73710 22947 NGTATVLSV True PC9_epitope_Rep5 860.46034677432 860.45924993586 93.253 2 -1.5092563323738857 0.40955176093916756 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4', 'FAT4|p.G4312W|1|0.31|ENSG00000196159|chr4:125487456-125487456|G/T|missense_variant', 'nc|ENSG00000196159|Q6V0I7-2|FAT4'] 58693 21756 LFKALKRIHQF True PC9_epitope_Rep6 1399.84522464111 1399.84412993586 96.577 2 -1.5092690532717297 0.40955176093916756 1.0 ['ENSG00000097046|ENST00000234626|CDC7'] 135301 20443 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 85.572 2 -1.5093628240000168 0.40955176093916756 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 111557 8271 TLMHPSLTRP True H1975_Epitope_Rep1 1151.61211347179 1151.61100993586 36.748 2 -1.5094016028723678 0.40955176093916756 1.0 ['nc|ENSG00000158966|Q5VU97-2|CACHD1', 'ENSG00000158966|ENST00000651257|CACHD1'] 111291 17957 TLHHLALI True PC9_epitope_Rep1 916.54943656224 916.54832993586 73.862 2 -1.509459466035674 0.40955861028942636 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 37611 15674 GYSLKATT True PC9_epitope_Rep4 839.43888305375 839.43778993586 68.217 2 -1.5096474984423895 0.40964875649591687 1.0 ['nc|ENSG00000091879|O15123-2|ANGPT2', 'ENSG00000091879|ENST00000629816|ANGPT2', 'nc|ENSG00000091879|O15123|ANGPT2'] 36661 20390 GVLQNSAP True PC9_epitope_Rep4 784.40791727864 784.4073649679301 86.575 1 -1.509651165448605 0.40964875649591687 1.0 ['ENST00000473484.1_1_3:46713038-46716081:-|nuORF', 'nc|ENSG00000178038|Q60I27-4|ALS2CL'] 57381 12116 LEHLRITV True PC9_epitope_Rep4 979.58146496651 979.58036993586 54.412 2 -1.5096833533685763 0.40964875649591687 1.0 ['ENSG00000156510|ENST00000354624|HKDC1'] 55358 16721 LASLLDIL True PC9_epitope_Rep1 856.52696978216 856.52586993586 69.146 2 -1.5097066221116844 0.40965560440325255 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 32033 12369 GEVIIPKE True H1975_Epitope_Rep1 883.5014833103099 883.5009349679301 52.608 1 -1.5097349631250863 0.40969725089896764 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 97502 20672 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 85.622 2 -1.5098077730246438 0.40970409808493113 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 114605 16872 TSLRVGRK True NCI_RA007_Epitope_Rep4 915.5613982282699 915.56030993586 73.112 2 -1.5098359978109164 0.4097177919803278 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 115250 9996 TVDFEELLH True PC9_epitope_Rep1 1101.5342399905699 1101.5331499358601 43.315 2 -1.5098390888901896 0.4097177919803278 1.0 ['ENST00000220913.9_1_8:141525461-141525764:+|nuORF'] 30287 24849 GAAQAPWP True PC9_epitope_Rep5 796.3867879112399 796.38568993586 100.74 2 -1.509970691452177 0.4097314852403874 1.0 ['CCDC61|p.G102Afs*19|1|0.29|ENSG00000104983|chr19:46006627-46006627|G/-|frameshift_variant'] 120740 12648 VGAVFLILPFL True PC9_epitope_Rep6 1187.7318175983098 1187.7301649037902 60.115 3 -1.5100306096974243 0.4097314852403874 1.0 ['ENST00000412877.1_1_3:184079639-184080938:+|nuORF', 'ENST00000456318.5_2_3:184079522-184080848:+|nuORF'] 90643 24486 RKKPILLVH True NCI_RA007_Epitope_Rep1 1102.7338832869798 1102.7327899358602 101.45 2 -1.5101071196240616 0.40976152918251835 1.0 ['ENSG00000042088|ENST00000335725|TDP1', 'TDP1|p.G229R|1|0.07|ENSG00000042088|chr14:89971200-89971200|G/C|missense_variant'] 47963 23209 KAERKKHSLK True PC9_epitope_Rep3 1223.7462388758297 1223.7451499358601 94.548 2 -1.5101270657206076 0.40976837514643283 1.0 ['ENSG00000070061|ENST00000374647|ELP1'] 20607 8811 EQERQQEEQER True H1975_Epitope_Rep1 1487.6600621918699 1487.6589699358601 38.817 2 -1.510176016258133 0.4097841593115366 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4', 'ENST00000515341.6_1_15:85055093-85055729:-|nuORF'] 11222 23467 DENECNWMM True H1975_Epitope_Rep3 1170.3780163263 1170.37636490379 97.935 3 -1.5101789970320874 0.4097841593115366 1.0 ['ENSG00000110851|ENST00000228437|PRDM4'] 137908 14651 YPPGAILV True NCI_RA007_Epitope_Rep4 828.47454028648 828.47344993586 63.762 2 -1.5102179851981132 0.4097841593115366 1.0 ['ENSG00000163214|ENST00000457308|DHX57'] 36080 12370 GVEEEVLTRFQ True PC9_epitope_Rep5 1305.6564803815697 1305.65538993586 52.578 2 -1.5102949832283916 0.4097841593115366 1.0 ['nc|ENSG00000163006|Q96M89-2|CCDC138', 'ENSG00000163006|ENST00000295124|CCDC138'] 85497 13964 QLIEKITQV True PC9_epitope_Rep6 1070.63356010902 1070.6324699358602 65.567 2 -1.5103470998315753 0.40979994201217745 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1', 'ENST00000472131.5_1_1:15653545-15656069:+|nuORF', 'ENST00000459961.1_1_1:15653545-15655159:+|nuORF'] 87255 18206 QSRLRDRALA True NCI_RA007_Epitope_Rep3 1184.67380221156 1184.67214490379 79.73 3 -1.5104119131134184 0.40979994201217745 1.0 ['PRAMEF12|p.L17R|1|0.39|ENSG00000116726|chr1:12774917-12774917|T/G|missense_variant'] 122500 20518 VGSRRGRR True PC9_epitope_Rep6 942.5583785364998 942.55783496793 91.652 1 -1.5104244779123843 0.40979994201217745 1.0 ['ENST00000523094.5_2_5:157285974-157286100:-|nuORF'] 2298 19337 AEPVLIRIK True PC9_epitope_Rep5 1037.65971528721 1037.65860993586 79.424 2 -1.5104539256854241 0.40979994201217745 1.0 ['GALNT18|p.T266I|1|0.15|ENSG00000110328|chr11:11377362-11377362|G/A|missense_variant'] 57969 19640 LEQRHAGLRR True PC9_epitope_Rep4 1234.7006856657397 1234.69958993586 83.663 2 -1.5105505752576587 0.4098299816760606 1.0 ['ENSG00000125864|ENST00000377873|BFSP1'] 116262 7652 TVVEGRKI True PC9_epitope_Rep2 900.5392658013599 900.53816993586 34.803 2 -1.5105884821169295 0.40983682605216465 1.0 ['nc|ENSG00000100320|O43251-8|RBFOX2', 'nc|ENSG00000100320|O43251-10|RBFOX2', 'nc|ENSG00000100320|O43251-6|RBFOX2', 'ENSG00000100320|ENST00000695854|RBFOX2', 'nc|ENSG00000100320|O43251-3|RBFOX2', 'nc|ENSG00000100320|O43251-2|RBFOX2', 'nc|ENSG00000100320|O43251|RBFOX2', 'nc|ENSG00000100320|O43251-5|RBFOX2', 'nc|ENSG00000100320|O43251-7|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-3|RBFOX1', 'ENSG00000078328|ENST00000550418|RBFOX1', 'nc|ENSG00000100320|O43251-4|RBFOX2', 'nc|ENSG00000100320|O43251-9|RBFOX2', 'nc|ENSG00000078328|Q9NWB1-4|RBFOX1', 'nc|ENSG00000078328|Q9NWB1-5|RBFOX1', 'nc|ENSG00000078328|Q9NWB1-2|RBFOX1'] 69006 14290 LVGVLAAH True H1975_Epitope_Rep3 778.4701236123801 778.46957496793 60.31 1 -1.5106060624673339 0.409855267430533 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'ENST00000483585.5_1_7:45002340-45005995:-|nuORF', 'ENST00000463516.5_1_7:45002340-45002744:-|nuORF'] 111893 14687 TLRRKYTR True NCI_RA007_Epitope_Rep4 1092.6516102149997 1092.65050993586 63.908 2 -1.5106402981619378 0.4098621113546487 1.0 ['ENST00000398497.2_1_21:43422514-43422670:-|nuORF'] 62201 20568 LLPPRLLGL True PC9_epitope_Rep1 990.6589870112199 990.65788993586 83.928 2 -1.5106712939013442 0.40986895512002786 1.0 ['ENST00000570507.5_1_17:79780712-79780796:-|nuORF', 'ENST00000576730.5_2_17:79780712-79781139:-|nuORF'] 67538 3761 LTEPDSSSPL True NCI_RA007_Epitope_Rep2 1044.49752012868 1044.49642993586 19.27 2 -1.510769501339203 0.409875798726676 1.0 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-4|TMEM132A'] 64804 18324 LRWLLPWAQNR True NCI_RA007_Epitope_Rep2 1451.8149871419898 1451.81388993586 76.031 2 -1.5109073261310129 0.40990108195238484 1.0 ['ENSG00000020181|ENST00000412232|ADGRA2', 'nc|ENSG00000020181|Q96PE1-2|ADGRA2'] 129063 13264 VTAPHADP True PC9_epitope_Rep3 806.3922672145 806.39116993586 56.053 2 -1.5109184886841385 0.40990108195238484 1.0 ['ENST00000471957.1_1_9:140482023-140483371:-|nuORF'] 62846 23645 LMKLLKMESP True H1975_Epitope_Rep3 1188.66103781016 1188.6599499358601 98.631 2 -1.510991847236311 0.4099195213025025 1.0 ['ENST00000320876.10_2_18:2666159-2666928:+|nuORF'] 19014 23885 ELGHVVGFWHE True NCI_RA007_Epitope_Rep5 1308.6251206836398 1308.6234749037899 99.241 3 -1.5110542227626433 0.4099332065494689 1.0 ['MED20-TLL2|1|fusion', 'ENSG00000095587|ENST00000357947|TLL2', 'ENST00000518656.5_1_8:22034120-22035374:+|nuORF', 'nc|ENSG00000168487|P13497-3|BMP1', 'TLL2|p.L355Cfs*37|2|0.47|ENSG00000095587|chr10:96410460-96410460|G/-|frameshift_variant', 'ENST00000518913.5_1_8:22034120-22058713:+|nuORF', 'nc|ENSG00000168487|P13497-4|BMP1', 'nc|ENSG00000168487|P13497-5|BMP1', 'nc|ENSG00000168487|P13497-2|BMP1', 'nc|ENSG00000168487|P13497-6|BMP1', 'ENST00000520982.5_1_8:22034120-22069238:+|nuORF', 'ENSG00000168487|ENST00000306385|BMP1'] 36081 5912 GVEEKKSL True PC9_epitope_Rep4 888.4916469025999 888.49054993586 29.648 2 -1.5110598769670684 0.4099332065494689 1.0 ['ENST00000607532.5_1_6:13307806-13327130:-|nuORF', 'nc|ENSG00000145979|Q9P0N9-4|TBC1D7', 'nc|ENSG00000145979|Q9P0N9-2|TBC1D7', 'ENSG00000145979|ENST00000379300|TBC1D7'] 86347 24497 QQKRRRRR True H1975_Epitope_Rep2 1182.7282378262598 1182.72714993586 100.78 2 -1.5111431925217431 0.4099516448856059 1.0 ['PPWD1|p.R12K|1|0.15|ENSG00000113593|chr5:65563345-65563345|G/A|missense_variant'] 43110 7775 IGLYEPELG True NCI_RA007_Epitope_Rep1 989.5069626135698 989.50586993586 34.233 2 -1.5112397096267793 0.40998852027504956 1.0 ['nc|ENSG00000186998|Q96A84-2|EMID1', 'nc|ENSG00000186998|Q96A84|EMID1', 'ENSG00000186998|ENST00000334018|EMID1'] 113611 13939 TRCGDGGK True NCI_RA007_Epitope_Rep5 792.3548361599599 792.35372993586 60.3 2 -1.5112790547489026 0.40998852027504956 1.0 ['ENSG00000149256|ENST00000278550|TENM4'] 34279 12119 GPLLVLSV True NCI_RA007_Epitope_Rep4 796.50584041476 796.50474993586 53.612 2 -1.5113165417207934 0.4100069573283859 1.0 ['ENST00000286353.8_2_3:141012052-141012157:+|nuORF'] 129997 8576 VTPKLTSR True PC9_epitope_Rep1 900.53926580136 900.53816993586 37.824 2 -1.511472503438157 0.4100253939541517 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1'] 71329 23471 MHHDRFKVF True H1975_Epitope_Rep3 1215.5971321139898 1215.59548490379 97.951 3 -1.5115313936657389 0.41003223487395934 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF', 'ENSG00000068976|ENST00000164139|PYGM', 'nc|ENSG00000068976|P11217-2|PYGM'] 36721 10234 GVNGGGGW True NCI_RA007_Epitope_Rep3 702.30853759054 702.3079849679301 47.333 1 -1.511598688264057 0.410039075635124 1.0 ['ENST00000003100.12_1_7:91761115-91763805:-|nuORF'] 101039 12985 SLTLKDRMW True PC9_epitope_Rep4 1148.60121443492 1148.60010993586 57.84 2 -1.5116105600242107 0.41004116180648154 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ'] 72440 18873 MTLMLPFKI True PC9_epitope_Rep4 1092.60754568532 1092.6064499358602 80.681 2 -1.511653615529942 0.41004116180648154 1.0 ['ENSG00000181631|ENST00000325602|P2RY13', 'nc|ENSG00000181631|Q9BPV8-2|P2RY13', 'P2RY13|p.F268Lfs*48|1|0.31|ENSG00000181631|chr3:151328252-151328252|A/-|frameshift_variant'] 55597 7796 LCNGAILAHC True NCI_RA007_Epitope_Rep2 1013.47865677409 1013.47754993586 34.952 2 -1.5117653061999323 0.4100500881179853 1.0 ['nc|ENSG00000131747|P11388-4|TOP2A'] 97499 20336 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 84.273 2 -1.5117962731895547 0.4100500881179853 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 10253 21356 CFVEFGAGK True NCI_RA007_Epitope_Rep5 956.4425885351998 956.44148993586 89.204 2 -1.5118129526543647 0.4100500881179853 1.0 ['ENST00000482437.5_1_1:100606401-100609704:+|nuORF', 'ENSG00000122435|ENST00000370141|TRMT13'] 138626 16213 YRRGRRQLQLL True NCI_RA007_Epitope_Rep4 1457.8691479731697 1457.8675049037902 70.308 3 -1.5120504826802788 0.4100521739130435 1.0 ['ENSG00000205138|ENST00000378887|SDHAF1'] 125940 10529 VPAEEPANE True PC9_epitope_Rep1 954.4294405688598 954.42834993586 45.39 2 -1.5120817793184402 0.4100521739130435 1.0 ['ENSG00000105223|ENST00000409735|PLD3', 'ENST00000493006.1_1_19:40872390-40872823:+|nuORF', 'ENST00000485448.1_1_19:40872390-40872810:+|nuORF'] 9073 13341 AVKKDSEL True PC9_epitope_Rep1 888.4916469025999 888.49054993586 56.175 2 -1.5120897918101 0.4100563452129756 1.0 ['ENST00000487286.1_1_2:44429163-44440857:+|nuORF', 'nc|ENSG00000138032|O75688-3|PPM1B', 'nc|ENSG00000138032|O75688-5|PPM1B', 'ENST00000409486.6_1_2:44428329-44436483:+|nuORF', 'nc|ENSG00000138032|O75688-4|PPM1B', 'nc|ENSG00000138032|O75688-2|PPM1B', 'ENSG00000138032|ENST00000282412|PPM1B'] 14420 4591 DTKKLRDNY True H1975_Epitope_Rep2 1151.59348620219 1151.5923899358602 22.764 2 -1.5121162499237621 0.4100563452129756 1.0 ['CNGA2|p.I487Mfs*21|1|0.55|ENSG00000183862|chrX:151743964-151743964|C/-|frameshift_variant', 'ENSG00000183862|ENST00000329903|CNGA2'] 133085 15798 WAGDNQGL True NCI_RA007_Epitope_Rep3 859.3824308067899 859.38132993586 69.779 2 -1.5121282099693607 0.4100563452129756 1.0 ['ENSG00000132004|ENST00000393261|FBXW9', 'nc|ENSG00000132004|Q5XUX1-2|FBXW9'] 111763 20012 TLQLYNSVK True PC9_epitope_Rep2 1064.5866099165999 1064.58550993586 82.38 2 -1.5121570999107734 0.4100563452129756 1.0 ['nc|ENSG00000096996|P42701-2|IL12RB1', 'ENSG00000096996|ENST00000593993|IL12RB1', 'nc|ENSG00000096996|P42701-3|IL12RB1', 'IL12RB1|p.P391Rfs*64|1|0.93|ENSG00000096996|chr19:18069563-18069563|G/-|frameshift_variant'] 77649 11814 NYYSTLSFT True PC9_epitope_Rep1 1094.49204082542 1094.49094993586 50.31 2 -1.5123820454374497 0.41012323637501885 1.0 ['ENSG00000087128|ENST00000305363|TMPRSS11E'] 5520 16602 ANDNSPFVLYL True H1975_Epitope_Rep1 1251.6135529404298 1251.61244993586 69.236 2 -1.5123992946607976 0.41012323637501885 1.0 ['PCDHB11|p.P564L|2|0.27|ENSG00000197479|chr5:141201465-141201465|C/T|missense_variant'] 37175 12205 GVTRGWGRWPI True PC9_epitope_Rep2 1283.6887239997097 1283.68762993586 52.258 2 -1.5124210854233124 0.41012323637501885 1.0 ['ENSG00000139289|ENST00000266671|PHLDA1'] 122121 16452 VGRGRGLP True NCI_RA007_Epitope_Rep1 810.4824196315799 810.48187496793 68.108 1 -1.5124381306921495 0.4101416680191982 1.0 ['ENSG00000188177|ENST00000409871|ZC3H6', 'ZC3H6|p.K223R|1|0.19|ENSG00000188177|chr2:112311858-112311858|A/G|missense_variant', 'ENST00000476511.1_1_2:113067635-113069532:+|nuORF'] 108028 7646 TDEKDKFV True PC9_epitope_Rep1 980.4814761417199 980.48036993586 34.233 2 -1.51261172416433 0.41014850624282684 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 109013 11322 TEVTDVYEM True PC9_epitope_Rep5 1085.4586920918098 1085.4575899358601 48.544 2 -1.5126540976379546 0.41015534430790634 1.0 ['ENST00000483009.1_1_1:32667515-32670212:+|nuORF', 'ENSG00000160050|ENST00000373602|CCDC28B', 'nc|ENSG00000160050|Q9BUN5-3|CCDC28B'] 124246 24355 VLCPGLHS True NCI_RA007_Epitope_Rep5 824.4214591678001 824.42036993586 101.15 2 -1.51271145545819 0.4101969603876607 1.0 ['ENST00000431992.5_2_1:33789663-33789792:-|nuORF'] 11534 8798 DGLIIPSVA True H1975_Epitope_Rep3 883.5014833103099 883.50038993586 38.847 2 -1.5128267649189195 0.41020587962533617 1.0 ['ENST00000510283.5_1_17:49059961-49059994:-|nuORF'] 42742 18348 IFDRELHRQTG True PC9_epitope_Rep6 1370.7054962626598 1370.70438993586 83.218 2 -1.512841439562183 0.41020587962533617 1.0 ['ENSG00000058085|ENST00000264144|LAMC2', 'nc|ENSG00000058085|Q13753-2|LAMC2', 'chr1:183207943-183215453|223|30.46|0.17|7.49|+|2|None,LAMC2|1'] 138736 5944 YSADTLAHH True PC9_epitope_Rep4 1013.45665837621 1013.45556993586 29.793 2 -1.5128424040011987 0.41020587962533617 1.0 ['nc|ENSG00000122861|P00749-2|PLAU', 'ENSG00000122861|ENST00000372764|PLAU'] 66149 12308 LSPDLSHTTL True PC9_epitope_Rep6 1082.56078909158 1082.5596899358602 58.736 2 -1.512914200950174 0.41021955347413813 1.0 ['ENSG00000198734|ENST00000367797|F5'] 87488 3554 QTFHPDICYKH True NCI_RA007_Epitope_Rep2 1387.6343054683498 1387.63264490379 18.473 3 -1.5129167109198358 0.41021955347413813 1.0 ['ENST00000572067.1_1_16:67917377-67917635:+|nuORF'] 125081 25420 VLPGKKKKKT True NCI_RA007_Epitope_Rep3 1125.75976368165 1125.75811490379 109.89 3 -1.51304721363364 0.4102448184726666 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 79639 4624 PHFKMNSAAPS True H1975_Epitope_Rep2 1185.56007789893 1185.55843490379 22.887 3 -1.5131257766004513 0.4102448184726666 1.0 ['nc|ENSG00000293473|B2RD01|CENPBD1P'] 10560 2197 CQPRRMKERS True NCI_RA007_Epitope_Rep2 1289.64449331257 1289.6428349037901 12.006 3 -1.513160828665651 0.4102516547079484 1.0 ['ENST00000268182.9_1_15:91043340-91043523:+|nuORF'] 55946 22152 LDHNYAQWQE True PC9_epitope_Rep5 1302.5629143498998 1302.56180993586 90.244 2 -1.513239107814959 0.4102558158404136 1.0 ['nc|ENSG00000118058|Q03164-2|KMT2A', 'nc|ENSG00000118058|Q03164|KMT2A', 'ENSG00000118058|ENST00000534358|KMT2A'] 124050 22700 VKQNEARTET True PC9_epitope_Rep6 1174.5942144781798 1174.5931099358602 100.39 2 -1.513289984082573 0.4102558158404136 1.0 ['ENSG00000134262|ENST00000369569|AP4B1', 'ENST00000479285.5_1_1:114437689-114438127:-|nuORF'] 26563 19683 FIWLIRSLYE True NCI_RA007_Epitope_Rep5 1338.7336085034601 1338.73195490379 82.623 3 -1.5132921879299124 0.4102558158404136 1.0 ['ENSG00000167207|ENST00000647318|NOD2', 'nc|ENSG00000167207|Q9HC29|NOD2'] 58038 8359 LERIKNNDP True PC9_epitope_Rep2 1097.58292151849 1097.58182993586 37.525 2 -1.5133516268463647 0.4102558158404136 1.0 ['nc|ENSG00000136842|P28289-2|TMOD1', 'ENSG00000136842|ENST00000259365|TMOD1'] 61441 11681 LLEVTQSNVEI True NCI_RA007_Epitope_Rep3 1243.6659824361097 1243.6648899358602 53.064 2 -1.5135145015659657 0.4102626515520319 1.0 ['ENSG00000187889|ENST00000343433|FYB2', 'nc|ENSG00000187889|Q5VWT5-2|FYB2'] 23255 25655 EVRKVNRIL True PC9_epitope_Rep1 1125.69822605425 1125.6971299358602 103.71 2 -1.5135243735135175 0.41027840237372215 1.0 ['MISP|p.P421L|1|0.31|ENSG00000099812|chr19:758208-758208|C/T|missense_variant'] 134325 10679 WRWRDFLRSFL True NCI_RA007_Epitope_Rep5 1580.8364508625598 1580.8353499358602 47.713 2 -1.5135553774192192 0.41027840237372215 1.0 ['ENST00000261441.9_2_1:114340169-114340280:-|nuORF'] 31124 21836 GCGKRFTE True H1975_Epitope_Rep2 896.4174364165199 896.41632993586 90.3 2 -1.5135846232129142 0.41027840237372215 1.0 ['ENST00000229405.8_1_6:35260320-35261695:+|nuORF', 'nc|ENSG00000065029|P36508-2|ZNF76', 'ENSG00000065029|ENST00000373953|ZNF76', 'ZNF76|p.S330L|1|0.17|ENSG00000065029|chr6:35292611-35292611|C/T|missense_variant'] 114536 24379 TSHGLRRHPS True PC9_epitope_Rep3 1146.6006372713 1146.59899490379 99.087 3 -1.5136123974030828 0.41027840237372215 1.0 ['ENSG00000108021|ENST00000695737|TASOR2', 'nc|ENSG00000108021|Q5VWN6-2|TASOR2'] 133899 2687 WNEPLYHL True PC9_epitope_Rep3 1070.51853035678 1070.51742993586 14.801 2 -1.5137826757530943 0.4102852374274157 1.0 ['ENSG00000172179|ENST00000306482|PRL'] 134188 24690 WRLRVVARPLR True H1975_Epitope_Rep1 1420.8891551417596 1420.8880499358602 102.29 2 -1.5140188670183032 0.41032416582640846 1.0 ['ENST00000263708.6_1_2:120517626-120517854:+|nuORF'] 101077 14856 SLTSSPTPV True H1975_Epitope_Rep1 887.46001242115 887.4594649679301 62.375 1 -1.5141078224839533 0.41032416582640846 1.0 ['OR2F1|p.L226Qfs*56|3|0.16|ENSG00000213215|chr7:143960647-143960647|T/-|frameshift_variant'] 62079 21666 LLNEFDRII True PC9_epitope_Rep2 1131.62880908175 1131.6277099358601 88.815 2 -1.514151810325899 0.41032416582640846 1.0 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant'] 12982 24771 DLPVIDILKIE True PC9_epitope_Rep3 1266.74350448082 1266.74240993586 100.66 2 -1.5142349955693184 0.41032416582640846 1.0 ['ENSG00000164002|ENST00000415550|EXO5'] 118411 7291 VDLTYTYDHL True PC9_epitope_Rep5 1238.58191845898 1238.58028490379 33.009 3 -1.5142806396053077 0.41032772447040283 1.0 ['nc|ENSG00000023228|P28331-3|NDUFS1', 'nc|ENSG00000023228|P28331-4|NDUFS1', 'nc|ENSG00000023228|P28331-5|NDUFS1', 'ENSG00000023228|ENST00000233190|NDUFS1', 'nc|ENSG00000023228|P28331-2|NDUFS1'] 67274 10555 LTDNIQDEFF True H1975_Epitope_Rep2 1240.5611830144 1240.56008993586 45.619 2 -1.5143078046395144 0.41032772447040283 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D'] 62085 25292 LLNGKKRRRWI True PC9_epitope_Rep3 1438.8997198254597 1438.89862993586 102.69 2 -1.5143949416376814 0.41032772447040283 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 67549 7967 LTEQLRSLIP True H1975_Epitope_Rep1 1168.6815729306 1168.6804699358602 35.594 2 -1.514490359416471 0.41032772447040283 1.0 ['ENSG00000185158|ENST00000543378|LRRC37B', 'nc|ENSG00000185158|Q96QE4-2|LRRC37B', 'nc|ENSG00000185158|Q96QE4|LRRC37B', 'ENST00000579766.1_1_17:30376071-30377294:+|nuORF', 'ENST00000417404.2_1_17:28960066-28961284:+|nuORF', 'ENST00000579094.1_1_17:30374694-30380344:+|nuORF'] 121766 15248 VGMFLLLL True PC9_epitope_Rep4 904.5455970517598 904.54504496793 66.58 1 -1.5144924529483526 0.41032772447040283 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 130116 6256 VTRDEAAK True PC9_epitope_Rep4 888.4664947839199 888.46538993586 31.113 2 -1.5145098417752632 0.41032772447040283 1.0 ['nc|ENSG00000106344|Q9NW13-2|RBM28', 'ENSG00000106344|ENST00000223073|RBM28'] 69828 17016 LWYLSLEEV True PC9_epitope_Rep5 1150.5910265907 1150.58992993586 70.471 2 -1.5145622867794244 0.41032772447040283 1.0 ['ENSG00000256223|ENST00000248211|ZNF10'] 64382 4421 LQQITWQT True NCI_RA007_Epitope_Rep5 1016.52909504048 1016.52798993586 23.639 2 -1.5145711825684507 0.41032772447040283 1.0 ['ANXA2-RORA|1|fusion', 'ANXA2-RORA|2|fusion', 'nc|ENSG00000069667|P35398-4|RORA', 'ENSG00000069667|ENST00000335670|RORA', 'nc|ENSG00000069667|P35398-3|RORA', 'nc|ENSG00000069667|P35398-1|RORA', 'RORA|p.E293G|1|0.5|ENSG00000069667|chr15:60505572-60505572|T/C|missense_variant'] 73080 9910 NDNGNGKN True H1975_Epitope_Rep1 831.34710792723 831.34655496793 43.056 1 -1.5145917497054766 0.41032772447040283 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 118512 9947 VDSSGSSL True PC9_epitope_Rep5 750.3395629353 750.33846993586 43.234 2 -1.5146277440419806 0.4103461462691064 1.0 ['ENSG00000006459|ENST00000397560|KDM7A', 'ENST00000478996.1_1_7:139790896-139791898:-|nuORF', 'ENST00000472616.1_1_7:139790896-139796717:-|nuORF'] 14730 11090 DVSVSQGFRML True H1975_Epitope_Rep1 1237.6125073946098 1237.6114099358601 47.621 2 -1.5147093875307578 0.4103529793496651 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 112766 22404 TPKSVRRG True PC9_epitope_Rep4 899.5300980999899 899.52900993586 94.41 2 -1.5147831122743973 0.41035981227185814 1.0 ['nc|ENSG00000120539|Q96GX5-2|MASTL', 'nc|ENSG00000120539|Q96GX5-3|MASTL', 'ENSG00000120539|ENST00000375940|MASTL', 'MASTL|p.V730L|1|0.28|ENSG00000120539|chr10:27173181-27173181|G/C|missense_variant'] 44636 11841 IPISRQEP True PC9_epitope_Rep2 938.5185303567799 938.51742993586 50.875 2 -1.5147894967415656 0.41036188975283033 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'TOGARAM2|p.G616Rfs*15|1|0.23|ENSG00000189350|chr2:29024366-29024367|-/C|frameshift_variant'] 82882 20171 PVVVDSSS True PC9_epitope_Rep6 788.39159850816 788.39050993586 90.261 2 -1.514807455106354 0.41036188975283033 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2'] 95250 7365 SADKYVKIWDI True NCI_RA007_Epitope_Rep2 1336.7027022979998 1336.70160993586 33.272 2 -1.5148551993714705 0.4103707995365006 1.0 ['ENSG00000136045|ENST00000412830|PWP1'] 20434 18141 EPQILKEV True PC9_epitope_Rep6 954.5385970950199 954.53750993586 82.416 2 -1.514869861703698 0.4103707995365006 1.0 ['nc|ENSG00000165271|Q9H6R4-2|NOL6', 'nc|ENSG00000165271|Q9H6R4-4|NOL6', 'ENSG00000165271|ENST00000297990|NOL6'] 118592 9623 VEAGGLLEKW True H1975_Epitope_Rep1 1100.5866099165999 1100.58550993586 41.942 2 -1.514900216463279 0.4103707995365006 1.0 ['ENSG00000184730|ENST00000564831|APOBR', 'nc|ENSG00000184730|Q0VD83-3|APOBR', 'nc|ENSG00000184730|Q0VD83-2|APOBR'] 10510 5610 CNYRDVRF True PC9_epitope_Rep5 1071.4919983391098 1071.4909099358601 26.582 2 -1.5149225696131372 0.4103776317771521 1.0 ['ENSG00000267631|ENST00000301407|CGB1', 'ENSG00000104818|ENST00000359342|CGB2', 'ENSG00000213030|ENST00000448456|CGB8', 'ENSG00000196337|ENST00000684222|CGB7', 'ENSG00000189052|ENST00000301408|CGB5', 'ENSG00000104827|ENST00000357383|CGB3', 'nc|ENSG00000213030|P0DN86-2|CGB3', 'nc|ENSG00000267631|A6NKQ9|CGB1'] 90301 23429 RHVRVHSGET True NCI_RA007_Epitope_Rep3 1176.6112019549996 1176.60955490379 101.7 3 -1.514970691976679 0.41038446385947025 1.0 ['ENSG00000256294|ENST00000262894|ZNF225'] 119605 23773 VERVHKVKA True NCI_RA007_Epitope_Rep4 1064.6454622053998 1064.6443699358601 103.06 2 -1.5150402710430286 0.41039069379431803 1.0 ['LRP5|p.I568V|1|0.21|ENSG00000162337|chr11:68403600-68403600|A/G|missense_variant'] 7250 11317 ARKVRVWNREF True NCI_RA007_Epitope_Rep4 1459.81604977115 1459.81494993586 50.425 2 -1.5151129675708017 0.41039069379431803 1.0 ['ENSG00000070061|ENST00000374647|ELP1'] 36362 8405 GVHPAPGF True NCI_RA007_Epitope_Rep5 780.39187329168 780.39076993586 39.007 2 -1.5152148408386954 0.41039069379431803 1.0 ['ENSG00000180667|ENST00000315927|YOD1'] 29555 26062 FVIFMFFLN True PC9_epitope_Rep3 1176.6041745570399 1176.60253490379 106.16 3 -1.515224491641208 0.41039069379431803 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 62870 9745 LMQIREFLEYR True PC9_epitope_Rep6 1496.7809697020398 1496.7793349037902 47.906 3 -1.5152334968160615 0.41039069379431803 1.0 ['ENST00000494357.1_1_7:99170104-99170224:+|nuORF'] 59572 16446 LGRNHIHVI True PC9_epitope_Rep3 1057.61449643029 1057.6133899358601 68.396 2 -1.5153144602367967 0.41039069379431803 1.0 ['ENST00000399070.3_2_18:32886564-32887857:+|nuORF'] 82054 6016 PSVPGPGLGQG True PC9_epitope_Rep4 964.4977949121999 964.49668993586 30.119 2 -1.5153210927316336 0.41039752517118727 1.0 ['ENST00000534025.5_1_11:8986022-8986145:-|nuORF'] 97222 11772 SFLEKCVE True NCI_RA007_Epitope_Rep3 953.4528188657299 953.45172993586 53.416 2 -1.5153562279310493 0.41040435638975786 1.0 ['ENST00000470597.5_1_5:64558740-64769500:-|nuORF'] 133420 23131 WFWKLVPARYR True PC9_epitope_Rep6 1520.8404736138398 1520.83936993586 102.07 2 -1.5154102661484028 0.4104064324775234 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2'] 41892 4645 IDYDRDRFDRE True H1975_Epitope_Rep3 1498.6800693604598 1498.67896993586 22.988 2 -1.5154129220505563 0.4104064324775234 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'nc|ENSG00000119596|P49750-3|YLPM1', 'nc|ENSG00000119596|P49750-1|YLPM1'] 37870 21695 HDYWLLAGIIN True H1975_Epitope_Rep1 1313.6768219033297 1313.67572993586 90.145 2 -1.5154390336569203 0.4104132633554621 1.0 ['CHD4|p.V1871Sfs*11|1|0.11|ENSG00000111642|chr12:6570950-6570951|-/G|frameshift_variant', 'ENSG00000111642|ENST00000544040|CHD4', 'nc|ENSG00000111642|Q14839-2|CHD4'] 127561 22563 VQVREKLKHA True PC9_epitope_Rep4 1206.71968977482 1206.71858993586 95.028 2 -1.5154525960329268 0.4104194904945609 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF', 'SMC4|p.D397H|1|0.11|ENSG00000113810|chr3:160414434-160414434|G/C|missense_variant'] 56324 6123 LDREQTDRYEF True H1975_Epitope_Rep1 1470.6739213508597 1470.6728299358601 28.622 2 -1.515504706362406 0.4104194904945609 1.0 ['ENSG00000169851|ENST00000695919|PCDH7', 'nc|ENSG00000169851|O60245|PCDH7', 'nc|ENSG00000169851|O60245-2|PCDH7'] 70448 23881 LYRLRRKLEKN True PC9_epitope_Rep1 1487.9048647755496 1487.90376993586 96.66 2 -1.5155258392062698 0.4104194904945609 1.0 ['ENST00000491144.5_1_3:183855641-183858240:+|nuORF'] 30807 9619 GAPPRRAAP True PC9_epitope_Rep1 891.5038833521498 891.50278993586 41.855 2 -1.5155354833818022 0.4104194904945609 1.0 ['ENST00000555567.5_1_14:75421952-75422225:-|nuORF'] 76919 7689 NVLRNPLSR True NCI_RA007_Epitope_Rep2 1067.61997573355 1067.6188699358602 34.535 2 -1.5156454238819455 0.4104194904945609 1.0 ['ENSG00000175489|ENST00000339007|LRRC25'] 30514 13422 GAHRGLAVL True PC9_epitope_Rep5 892.52428444356 892.52318993586 56.643 2 -1.5156487384090798 0.4104194904945609 1.0 ['ENST00000518820.1_1_8:143599542-143620974:+|nuORF'] 134609 11818 WWEFGARWSYR True NCI_RA007_Epitope_Rep1 1542.71566702354 1542.71456993586 49.95 2 -1.5156781304927458 0.41044949026876737 1.0 ['ENST00000345617.7_1_2:240274417-240274489:-|nuORF'] 45616 7866 ISHAGHAL True PC9_epitope_Rep3 804.4242360491199 804.42312993586 35.242 2 -1.5157310352888644 0.4104910740144345 1.0 ['ENSG00000118961|ENST00000237822|LDAH', 'nc|ENSG00000118961|Q9H6V9-2|LDAH'] 55476 10742 LAVGAPSGY True H1975_Epitope_Rep1 833.42831837005 833.4277649679301 46.282 1 -1.5157637303629667 0.41049314782850455 1.0 ['nc|ENSG00000204053|P12525|MYCLP1'] 30449 19651 GAGDLGGF True NCI_RA007_Epitope_Rep3 692.31295426464 692.3124049679301 85.704 1 -1.5157717135189936 0.41049314782850455 1.0 ['ENST00000246672.3_1_17:38251239-38251841:-|nuORF'] 59566 7676 LGRLAHEVGW True PC9_epitope_Rep4 1136.60907669668 1136.60743490379 36.906 3 -1.5158216454836972 0.41050205036721266 1.0 ['ENSG00000142541|ENST00000391857|RPL13A', 'ENST00000425147.1_1_21:26734448-26734742:+|nuORF', 'ENST00000478813.1_1_8:81177882-81177960:-|nuORF', 'ENST00000488281.1_1_14:47669945-47669978:-|nuORF'] 111297 13494 TLHLHMIFLR True PC9_epitope_Rep2 1279.72233262711 1279.72069490379 57.192 3 -1.5158219260007995 0.41050205036721266 1.0 ['ENSG00000112276|ENST00000314641|BVES'] 128924 6589 VSTRSSTPL True PC9_epitope_Rep4 946.5083595959 946.50726993586 32.503 2 -1.5158563925665829 0.41050205036721266 1.0 ['ENST00000564587.5_1_15:75628430-75630983:+|nuORF'] 29934 26665 FWPANHNPF True PC9_epitope_Rep1 1128.5141136826799 1128.51247490379 108.37 3 -1.5159088700506225 0.41050619715046915 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 9173 13901 AVNRALRFC True NCI_RA007_Epitope_Rep3 1048.56001832928 1048.55892993586 61.998 2 -1.5159439967747206 0.41050619715046915 1.0 ['nc|ENSG00000186174|Q86UU0-3|BCL9L'] 56156 18349 LDNIIAGWP True PC9_epitope_Rep5 997.5232813840499 997.52218993586 75.596 2 -1.5159443733544997 0.41050619715046915 1.0 ['ENSG00000056291|ENST00000308744|NPFFR2', 'nc|ENSG00000056291|Q9Y5X5-3|NPFFR2', 'nc|ENSG00000056291|Q9Y5X5|NPFFR2'] 95009 1988 RYQFNTNVV True NCI_RA007_Epitope_Rep1 1139.57235683479 1139.5712499358601 10.473 2 -1.5159874400163074 0.41050619715046915 1.0 ['ENSG00000169814|ENST00000643237|BTD', 'nc|ENSG00000169814|P43251|BTD', 'nc|ENSG00000169814|P43251-3|BTD', 'nc|ENSG00000169814|P43251-2|BTD'] 123752 16525 VIRQAPPVI True PC9_epitope_Rep4 991.6178504752298 991.61674993586 71.536 2 -1.5161875625785426 0.4105130254485643 1.0 ['MAGEL2|p.Q863Rfs*41|1|0.27|ENSG00000254585|chr15:23645156-23645156|G/-|frameshift_variant', 'MAGEL2|p.Q863Pfs*45|1|0.15|ENSG00000254585|chr15:23645155-23645156|-/G|frameshift_variant', 'MAGEL2|p.H1085Qfs*21|2|0.21|ENSG00000254585|chr15:23644488-23644488|G/-|frameshift_variant', 'ENSG00000254585|ENST00000650528|MAGEL2'] 94192 7726 RWLWWQPWWWK True NCI_RA007_Epitope_Rep1 1756.8779217517197 1756.87682993586 34.045 2 -1.5163026154541879 0.4105397266620338 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1'] 126180 15072 VPGDMAREPV True PC9_epitope_Rep3 1069.52262976105 1069.5215299358601 63.109 2 -1.5164020082436467 0.4105397266620338 1.0 ['nc|ENSG00000163946|Q9UK61-2|TASOR', 'nc|ENSG00000163946|Q9UK61-3|TASOR', 'nc|ENSG00000163946|Q9UK61-4|TASOR', 'ENSG00000163946|ENST00000683822|TASOR', 'ENST00000459993.5_1_3:56657067-56667992:-|nuORF'] 72330 15130 MTDFNRGFR True H1975_Epitope_Rep2 1142.52911212382 1142.5280099358602 63.354 2 -1.5164099245564395 0.4105397266620338 1.0 ['ENST00000323460.9_1_3:196658379-196658646:+|nuORF'] 70777 9636 M[Oxidation]EEHTEAGSA True H1975_Epitope_Rep2 1076.40805388172 1076.4069499358602 42.043 2 -1.51650636148858 0.4105397266620338 1.0 ['ENSG00000140675|ENST00000330498|SLC5A2', 'nc|ENSG00000140675|P31639-2|SLC5A2'] 66257 5959 LSQASTDPK True NCI_RA007_Epitope_Rep2 945.4767251144499 945.47562993586 27.789 2 -1.5165214530441178 0.4105397266620338 1.0 ['nc|ENSG00000166863|Q9UHF0-3|TAC3', 'ENSG00000166863|ENST00000458521|TAC3', 'nc|ENSG00000166863|Q9UHF0-2|TAC3'] 66148 12226 LSPDLSHTTL True PC9_epitope_Rep6 1082.56078909158 1082.5596899358602 58.401 2 -1.5165307842759153 0.4105397266620338 1.0 ['ENSG00000198734|ENST00000367797|F5'] 22117 5381 ESWEIIGPYAS True H1975_Epitope_Rep2 1250.58191845898 1250.58082993586 25.734 2 -1.5165410435028663 0.4105397266620338 1.0 ['ENST00000380189.8_1_12:50527593-50531570:-|nuORF', 'nc|ENSG00000139624|Q8N5B7-2|CERS5', 'ENSG00000139624|ENST00000317551|CERS5', 'ENST00000551697.5_1_12:50524466-50529244:-|nuORF', 'ENST00000548942.1_1_12:50527593-50529244:-|nuORF', 'ENST00000550079.1_1_12:50524330-50528523:-|nuORF'] 81407 23113 PPWTCWPS True H1975_Epitope_Rep3 972.4163737873599 972.41526993586 96.529 2 -1.516546478924029 0.4105397266620338 1.0 ['MYO7B|p.F398Lfs*107|1|0.1|ENSG00000169994|chr2:127582002-127582002|T/-|frameshift_variant'] 36456 8832 GVIQRLTL True PC9_epitope_Rep6 898.5600012459399 898.55890993586 43.9 2 -1.5165531312627356 0.4105397266620338 1.0 ['ENSG00000090432|ENST00000264198|MUL1'] 125532 12901 VLWDDNRF True PC9_epitope_Rep1 1063.50869394907 1063.50758993586 54.496 2 -1.516633243590392 0.4105420396252851 1.0 ['ENSG00000123908|ENST00000220592|AGO2', 'nc|ENSG00000123908|Q9UKV8-2|AGO2', 'ENSG00000092847|ENST00000373204|AGO1'] 93367 19352 RRVQKQLEVI True NCI_RA007_Epitope_Rep4 1267.7724536236697 1267.7707949037901 83.694 3 -1.5166391732579472 0.4105420396252851 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B', 'ENST00000251181.8_1_14:105360511-105361292:+|nuORF'] 54839 13520 LAGAHMGR True H1975_Epitope_Rep3 811.4122914664299 811.4117449679301 57.284 1 -1.5166476305709855 0.4105420396252851 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'ENST00000462379.1_1_1:2435075-2436649:+|nuORF'] 71616 10739 MLLIEQLRMEY True PC9_epitope_Rep1 1437.73599365557 1437.73435490379 46.194 3 -1.5166628799917485 0.4105420396252851 1.0 ['ENSG00000170160|ENST00000399273|CCDC144A', 'nc|ENSG00000266302|A2RUR9|CCDC144A', 'nc|ENSG00000266302|A2RUR9-3|CCDC144A', 'nc|ENSG00000291090|Q3MJ40|CCDC144BP'] 83560 2819 QDRLLIPRWR True NCI_RA007_Epitope_Rep1 1351.7836870137098 1351.78204490379 14.801 3 -1.516696873162903 0.4105420396252851 1.0 ['nc|ENSG00000236384|Q96M42|LINC00479'] 81761 13633 PSDNYDFPP True H1975_Epitope_Rep2 1050.42944056886 1050.42887496793 57.578 1 -1.51672231611121 0.4105420396252851 1.0 ['nc|ENSG00000141255|Q8NHS9-3|SPATA22', 'ENSG00000141255|ENST00000572969|SPATA22'] 29512 25483 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 107.62 3 -1.51674520445006 0.4105420396252851 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 93830 3123 RVEFHEPETWW True NCI_RA007_Epitope_Rep2 1514.6942628726197 1514.69260490379 16.772 3 -1.516819337100168 0.4105420396252851 1.0 ['nc|ENSG00000244754|Q92802-2|N4BP2L2', 'ENSG00000244754|ENST00000267068|N4BP2L2', 'nc|ENSG00000244754|Q92802-3|N4BP2L2'] 44462 15462 INNIFYRFIYE True PC9_epitope_Rep5 1490.7558005000199 1490.75470993586 64.485 2 -1.5168420589649212 0.4105420396252851 1.0 ['nc|ENSG00000078304|Q13362-2|PPP2R5C', 'nc|ENSG00000078304|Q13362-3|PPP2R5C', 'nc|ENSG00000078304|Q13362|PPP2R5C', 'nc|ENSG00000078304|Q13362-4|PPP2R5C', 'nc|ENSG00000078304|Q13362-5|PPP2R5C', 'ENSG00000078304|ENST00000694906|PPP2R5C', 'ENST00000495716.1_1_3:52407964-52408519:+|nuORF', 'ENST00000556218.5_1_14:102349680-102375988:+|nuORF'] 68943 26044 LVFRKPRGLFI True PC9_epitope_Rep5 1344.8394109846797 1344.83776490379 105.78 3 -1.516878083500348 0.4105420396252851 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 112737 19394 TPKFHSYL True PC9_epitope_Rep2 991.51271670035 991.51160993586 79.976 2 -1.5169078804917857 0.4105420396252851 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39', 'ENST00000528810.1_1_8:145769259-145771014:-|nuORF'] 116622 16497 TYHMWWVCFWH True H1975_Epitope_Rep1 1594.66383177482 1594.6627299358602 68.827 2 -1.5169199554914545 0.4105420396252851 1.0 ['ENST00000523237.1_1_8:1721944-1728730:+|nuORF', 'ENSG00000182372|ENST00000331222|CLN8'] 29557 27045 FVIFMFFLN True PC9_epitope_Rep3 1176.6041745570399 1176.60253490379 111.25 3 -1.5169419061509217 0.4105420396252851 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 55591 19434 LCLTVRFNLVI True NCI_RA007_Epitope_Rep5 1289.75296404905 1289.75131490379 81.64 3 -1.5169916286004228 0.4105420396252851 1.0 ['ENST00000373840.8_1_9:123943305-123943461:-|nuORF'] 67778 12956 LTHHQKIHT True PC9_epitope_Rep1 1113.60432566941 1113.60322993586 54.708 2 -1.5170350739399523 0.4105420396252851 1.0 ['ZNF566|p.G223A|1|0.26|ENSG00000186017|chr19:36449566-36449566|C/G|missense_variant', 'ENSG00000186017|ENST00000452939|ZNF566', 'nc|ENSG00000186017|Q969W8-2|ZNF566'] 130992 16398 VVLATKTP True NCI_RA007_Epitope_Rep5 827.51165407119 827.51054993586 69.83 2 -1.5170878007879762 0.4105420396252851 1.0 ['ENSG00000090402|ENST00000264382|SI', 'SI|p.P1140Lfs*44|1|0.11|ENSG00000090402|chr3:165019606-165019606|G/-|frameshift_variant'] 44235 12058 ILSTMLTLTF True PC9_epitope_Rep1 1138.6307832277 1138.6296899358601 51.24 2 -1.5171099580454752 0.4105420396252851 1.0 ['ENSG00000164744|ENST00000297325|SUN3'] 3759 9166 AGTLRPHPL True NCI_RA007_Epitope_Rep3 960.5504991913999 960.54940993586 43.142 2 -1.517116898579152 0.4105420396252851 1.0 ['PRDM13|p.G487Afs*4|1|0.22|ENSG00000112238|chr6:99614094-99614094|G/-|frameshift_variant', 'ENSG00000112238|ENST00000369215|PRDM13'] 24791 7379 FC[Carbamidomethyl]EC[Carbamidomethyl]DNFNC[Carbamidomethyl]DR True NCI_RA007_Epitope_Rep2 1535.5227839053198 1535.5216899358602 33.327 2 -1.5171636398669996 0.4105420396252851 1.0 ['ENSG00000150093|ENST00000302278|ITGB1', 'nc|ENSG00000150093|P05556-2|ITGB1', 'nc|ENSG00000150093|P05556-5|ITGB1', 'nc|ENSG00000150093|P05556-4|ITGB1', 'nc|ENSG00000150093|P05556-3|ITGB1'] 122517 6853 VGSSRSLVFL True NCI_RA007_Epitope_Rep4 1063.60259433391 1063.6014899358602 32.981 2 -1.5171989198328506 0.4105488652153775 1.0 ['ENST00000429967.2_1_X:128781414-128781876:-|nuORF'] 48075 3748 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 18.948 3 -1.51727055942894 0.4105672699482405 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 96209 18331 SEEKPWECK True H1975_Epitope_Rep2 1134.5015599633 1134.4999049037901 76.015 3 -1.5173362432951043 0.41056896451930314 1.0 ['ENSG00000185869|ENST00000391711|ZNF829', 'nc|ENSG00000185869|Q3KNS6-3|ZNF829'] 75597 12672 NQRVIRDWR True PC9_epitope_Rep5 1241.6741365647297 1241.67302993586 53.747 2 -1.517355651095761 0.41056896451930314 1.0 ['ENST00000535572.5_1_12:992660-992994:+|nuORF'] 140160 19826 YVTEEIKNP True PC9_epitope_Rep4 1091.54989005471 1091.5487899358602 84.389 2 -1.5173573160197273 0.41056896451930314 1.0 ['ENSG00000155465|ENST00000674313|SLC7A7'] 75193 24560 NNRLYHKV True H1975_Epitope_Rep2 1042.5672118846999 1042.5661099358601 101.02 2 -1.5174633322978406 0.41056896451930314 1.0 ['nc|ENSG00000204116|Q5VXU3-2|CHIC1'] 40559 20841 HSSPEGKEEPE True H1975_Epitope_Rep2 1224.5258601348398 1224.5242049037902 86.294 3 -1.5175369211591856 0.41056896451930314 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'ENST00000472650.1_1_2:219136156-219182765:+|nuORF', 'nc|ENSG00000127838|Q8N490-2|PNKD'] 15625 5403 EAVSQLRS True H1975_Epitope_Rep1 888.4664947839199 888.46538993586 25.84 2 -1.5176823218840874 0.41056896451930314 1.0 ['SYNE1|p.C2396R|1|0.07|ENSG00000131018|chr6:152399667-152399667|A/G|missense_variant'] 32431 11492 GGGTCHRC True H1975_Epitope_Rep2 789.3010267652899 789.3004749679301 49.259 1 -1.5176838669537842 0.41056896451930314 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 65764 20564 LSIIPQEPV True PC9_epitope_Rep6 994.5698972232999 994.56880993586 91.828 2 -1.5177631811874823 0.41056896451930314 1.0 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5'] 74653 22811 NLGFGWGV True H1975_Epitope_Rep2 848.4180880395198 848.41698993586 94.185 2 -1.5177709682618028 0.41056896451930314 1.0 ['ENST00000498141.1_1_15:74630890-74631634:-|nuORF', 'nc|ENSG00000140459|P05108-2|CYP11A1', 'ENSG00000140459|ENST00000268053|CYP11A1'] 121819 12572 VGNGKGAA True NCI_RA007_Epitope_Rep3 672.3554877829599 672.35493496793 56.691 1 -1.5178211496950895 0.41056896451930314 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 58221 8991 LESTGGGP True H1975_Epitope_Rep1 716.33408363204 716.3335349679301 39.49 1 -1.517874898573926 0.41056896451930314 1.0 ['ENST00000535815.5_1_14:91710722-91710791:-|nuORF'] 25758 9182 FFQVGFVSV True H1975_Epitope_Rep3 1028.5331177917597 1028.53202993586 40.309 2 -1.5179093844671767 0.41056896451930314 1.0 ['ENSG00000155850|ENST00000286298|SLC26A2'] 41621 13401 IDGSERWWQSP True H1975_Epitope_Rep2 1359.62076357919 1359.6196699358602 56.682 2 -1.517969177990787 0.41056896451930314 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3'] 6627 21117 APWQQKNL True PC9_epitope_Rep2 983.5188647099499 983.51776993586 86.686 2 -1.5180578026061708 0.41056896451930314 1.0 ['ENST00000475109.5_1_7:35840829-35903188:+|nuORF'] 130856 11861 VVGGGWGA True NCI_RA007_Epitope_Rep2 701.34967412653 701.34912496793 50.739 1 -1.5180785799361156 0.41056896451930314 1.0 ['ENST00000576995.1_1_17:79079719-79080836:+|nuORF'] 20237 5961 ENVQRNLKH True PC9_epitope_Rep6 1136.6050539454 1136.60341490379 31.233 3 -1.5181599009699134 0.41056896451930314 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant', 'APOB|p.V2091L|1|0.29|ENSG00000084674|chr2:21010597-21010597|C/A|missense_variant'] 90659 24048 RKKYSLVNR True PC9_epitope_Rep1 1162.69347502698 1162.69183490379 97.311 3 -1.518193261364516 0.41056896451930314 1.0 ['ENSG00000014164|ENST00000262577|ZC3H3', 'ZC3H3-PYCRL|1|fusion'] 44363 16479 IMYTGRTPE True PC9_epitope_Rep3 1066.5117307241799 1066.5106299358602 68.523 2 -1.518233378498434 0.41056896451930314 1.0 ['ENST00000590749.2_19:966789-968568:+|nuORF'] 125858 10088 VNQVFLRLN True PC9_epitope_Rep4 1101.6294777880898 1101.62838993586 46.475 2 -1.5182474025497503 0.41056896451930314 1.0 ['nc|ENSG00000189050|Q5M7Z0-3|RNFT1'] 35877 7246 GVAETKLL True NCI_RA007_Epitope_Rep1 829.4909186266099 829.48982993586 32.177 2 -1.5182507867197717 0.41056896451930314 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'nc|ENSG00000144406|Q8N2C7-3|UNC80', 'ENST00000478701.1_1_2:210636760-210659540:+|nuORF'] 130499 7311 VTVSPRSPP True H1975_Epitope_Rep3 938.51853035678 938.51742993586 33.094 2 -1.518263791101759 0.41056896451930314 1.0 ['ENST00000566541.5_3_16:31886566-31901532:+|nuORF'] 126027 15472 VPAPPFSLGKL True PC9_epitope_Rep2 1124.65938093404 1124.65828993586 64.79 2 -1.51826420618172 0.41056896451930314 1.0 ['ENST00000456754.6_1_X:47444724-47445414:+|nuORF'] 30632 5362 GALDTHRR True PC9_epitope_Rep4 924.488961564 924.48786993586 27.344 2 -1.5182837450780955 0.41056896451930314 1.0 ['CON__Q32PI4'] 27011 13678 FLLIFFSPFP True H1975_Epitope_Rep3 1226.6739683690198 1226.67286993586 57.906 2 -1.5182990109052212 0.41056896451930314 1.0 ['ENST00000326764.9_2_19:54972239-54972944:+|nuORF', 'nc|ENSG00000167615|Q96PV6-1|LENG8'] 111652 15336 TLPAIKMAA True PC9_epitope_Rep5 914.52592423634 914.52482993586 64.0 2 -1.518378842277979 0.4105757877433843 1.0 ['ENST00000449714.1_1_2:150444067-150444316:+|nuORF'] 22741 16337 EVAGAVWTRR True PC9_epitope_Rep1 1143.61489035311 1143.61378993586 67.659 2 -1.5184600098614935 0.4105962564678373 1.0 ['ENST00000581616.2_1_17:16855864-16875385:-|nuORF'] 18065 6026 EIITYYYP True NCI_RA007_Epitope_Rep2 1060.51171364084 1060.5106099358602 28.048 2 -1.5185372577549516 0.4105962564678373 1.0 ['ENSG00000179477|ENST00000647874|ALOX12B'] 43111 7785 IGLYEPELG True NCI_RA007_Epitope_Rep2 989.5069626135698 989.50586993586 34.91 2 -1.518557040729106 0.4105962564678373 1.0 ['nc|ENSG00000186998|Q96A84-2|EMID1', 'nc|ENSG00000186998|Q96A84|EMID1', 'ENSG00000186998|ENST00000334018|EMID1'] 17646 17611 EHQKKVRKM True NCI_RA007_Epitope_Rep5 1182.6655460269797 1182.66391490379 74.523 3 -1.5186416336406274 0.41061465447389744 1.0 ['ENSG00000255150|ENST00000527879|EID3'] 66038 10174 LSNAYHEL True PC9_epitope_Rep2 945.4555957470501 945.45448993586 44.472 2 -1.5186757556923507 0.410621476774201 1.0 ['nc|ENSG00000141030|Q9UNS2-2|COPS3', 'ENSG00000141030|ENST00000268717|COPS3'] 55392 17364 LASSTRFPI True PC9_epitope_Rep5 990.5498304850599 990.54872993586 71.791 2 -1.518693058771856 0.4106282989165663 1.0 ['ENST00000602321.5_1_16:67682228-67682996:+|nuORF'] 78079 7314 PALTPPAP True H1975_Epitope_Rep3 762.42759009406 762.42648993586 33.106 2 -1.5187340629797537 0.4106351209009989 1.0 ['ENSG00000160447|ENST00000291906|PKN3'] 29509 25211 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 106.23 3 -1.5187683672308876 0.4106419427275042 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 67640 17250 LTFCRFNI True PC9_epitope_Rep2 1012.5164221818 1012.51532993586 71.612 2 -1.518985466155687 0.41067543169297716 1.0 ['ENSG00000196578|ENST00000358642|OR5AC2'] 3562 9206 AGNQEARLPR True H1975_Epitope_Rep3 1110.5894038812598 1110.58830993586 40.404 2 -1.51899224474682 0.41067543169297716 1.0 ['ENST00000372025.4_1_1:46153084-46153189:+|nuORF'] 47112 4252 IVWPWNDVP True H1975_Epitope_Rep2 1124.5654805492 1124.5638449037901 21.465 3 -1.5190491153923344 0.41067543169297716 1.0 ['ENST00000398632.3_1_21:42774955-42775423:+|nuORF'] 127800 23593 VRKSLIIH True H1975_Epitope_Rep2 964.6181848284 964.61708993586 97.239 2 -1.5190962740748328 0.41067543169297716 1.0 ['ENSG00000170265|ENST00000610704|ZNF282'] 131553 16510 VVVLLSAE True NCI_RA007_Epitope_Rep4 828.49566965388 828.49456993586 71.569 2 -1.5191071001015735 0.41067543169297716 1.0 ['PIK3AP1-TM9SF3|1|fusion', 'ENSG00000155629|ENST00000339364|PIK3AP1'] 53345 22059 KTRVSHLRP True H1975_Epitope_Rep2 1092.651610215 1092.65050993586 91.18 2 -1.5191221889006994 0.41067543169297716 1.0 ['ENSG00000198173|ENST00000358047|FAM47C'] 111614 12464 TLNPKYSL True PC9_epitope_Rep2 934.5123823471799 934.51128993586 53.253 2 -1.5191428894556231 0.41067543169297716 1.0 ['nc|ENSG00000139865|Q86TZ1|TTC6', 'nc|ENSG00000139865|Q86TZ1-2|TTC6', 'ENSG00000139865|ENST00000553443|TTC6'] 12937 24532 DLNRKLIPRE True PC9_epitope_Rep4 1252.7251690780797 1252.7240699358601 102.85 2 -1.5191441257693552 0.41067543169297716 1.0 ['ENSG00000107890|ENST00000376087|ANKRD26', 'nc|ENSG00000107890|Q9UPS8-2|ANKRD26'] 26932 17915 FLHGIRYFK True NCI_RA007_Epitope_Rep3 1179.6552986131098 1179.65365490379 78.503 3 -1.5191521303099158 0.41067543169297716 1.0 ['ENST00000481107.1_1_17:15927314-15927548:+|nuORF'] 110132 9898 TICSKLNGIR True NCI_RA007_Epitope_Rep1 1103.6121134717898 1103.61100993586 42.503 2 -1.5191636174993375 0.41067543169297716 1.0 ['INPP4B|p.R832S|1|0.26|ENSG00000109452|chr4:142082179-142082179|G/T|missense_variant'] 85917 8942 QNRWKRQNFHE True H1975_Epitope_Rep3 1541.7599914470095 1541.75888993586 39.392 2 -1.51928888547907 0.4107006457884869 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 58796 16284 LFPVPPGV True PC9_epitope_Rep3 824.4796256669199 824.47852993586 67.773 2 -1.519376530820415 0.4107006457884869 1.0 ['ENST00000357681.9_1_1:203711927-203711975:+|nuORF'] 49556 24615 KKIKLAAA True NCI_RA007_Epitope_Rep3 841.5749230340898 841.57382993586 106.46 2 -1.519522764627764 0.41073061210318607 1.0 ['ENSG00000118997|ENST00000312428|DNAH7'] 65617 12019 LSGLPDTVFEI True PC9_epitope_Rep6 1189.6230549949698 1189.6219499358601 57.52 2 -1.5195963201207783 0.4107605777242848 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 121461 8855 VGIQWWWVFLR True H1975_Epitope_Rep1 1488.8030254759599 1488.80192993586 38.984 2 -1.5197099627179902 0.4107905426518071 1.0 ['ENST00000325327.3_1_19:2430242-2430563:-|nuORF'] 88676 3092 RCAPRGKA True PC9_epitope_Rep3 857.4653896684499 857.46428993586 16.854 2 -1.5198390066520426 0.4107973614165027 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF'] 95944 5173 SDYSFSVIAMS True PC9_epitope_Rep1 1205.52744035797 1205.52634993586 24.751 2 -1.5199691147664842 0.4108388978255083 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 68985 14415 LVGNWLDLP True H1975_Epitope_Rep3 1025.5545815123298 1025.5534899358602 60.801 2 -1.5200809444943666 0.41086554038417034 1.0 ['ENSG00000197852|ENST00000357260|INKA2'] 132212 9421 VYKIMCVILV True PC9_epitope_Rep6 1179.67595959831 1179.67432490379 46.461 3 -1.5200902251769406 0.41086554038417034 1.0 ['ENST00000409892.5_1_2:65315130-65315409:-|nuORF'] 56095 19917 LDLLILVTMKH True NCI_RA007_Epitope_Rep5 1294.76827976002 1294.76662490379 83.524 3 -1.5201075246965505 0.41086554038417034 1.0 ['ENST00000446230.6_1_11:94278904-94308218:+|nuORF'] 38196 21710 HETGHVLG True H1975_Epitope_Rep2 848.41406528824 848.41296993586 89.81 2 -1.5201364982389893 0.41086554038417034 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 129037 7178 VTAGAGGG True NCI_RA007_Epitope_Rep5 588.2867395168 588.2861949679301 34.287 1 -1.520238508486968 0.41086554038417034 1.0 ['RASA1|p.L761Ffs*13|1|0.33|ENSG00000145715|chr5:87376977-87376977|C/-|frameshift_variant', 'RASA1|p.N838Mfs*4|1|0.22|ENSG00000145715|chr5:87379754-87379754|A/-|frameshift_variant', 'ENSG00000145715|ENST00000274376|RASA1', 'RASA1|p.L269Pfs*11|1|0.15|ENSG00000145715|chr5:87332616-87332620|TTACT/-|frameshift_variant', 'RASA1|p.N407Sfs*3|1|0.22|ENSG00000145715|chr5:87349329-87349332|CAAT/-|frameshift_variant', 'nc|ENSG00000145715|P20936-3|RASA1', 'RASA1|p.L146Sfs*24|1|0.5|ENSG00000145715|chr5:87268885-87268897|CTTTGGGGGCGGG/-|frameshift_variant'] 46056 20403 ISWKPPADDG True PC9_epitope_Rep1 1084.5189242795998 1084.5178299358602 83.293 2 -1.5202658554285529 0.41086554038417034 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 100945 8803 SLSQKQDPK True PC9_epitope_Rep3 1029.5454733806098 1029.54436993586 38.812 2 -1.5203358291618858 0.41086554038417034 1.0 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106'] 82932 21715 PWLFIPLP True PC9_epitope_Rep4 981.5687750244899 981.56766993586 91.722 2 -1.5203791681552798 0.41086554038417034 1.0 ['ENST00000479872.5_1_1:165879160-165879211:+|nuORF'] 120954 5499 VGELRTLK True PC9_epitope_Rep5 914.5549158654999 914.55380993586 26.161 2 -1.5203991730677284 0.41086554038417034 1.0 ['CEP192|p.S2456L|1|0.24|ENSG00000101639|chr18:13116454-13116454|C/T|missense_variant'] 87160 21583 QSKNWIFIWL True PC9_epitope_Rep6 1333.7182927924898 1333.71664490379 95.895 3 -1.5204410726946296 0.41087172841506026 1.0 ['ENST00000360105.8_1_19:13136243-13184244:+|nuORF'] 79865 21248 PIIVKDDVEP True PC9_epitope_Rep4 1123.61249031127 1123.6113899358602 89.895 2 -1.5205447618171908 0.41087172841506026 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 81051 22969 PPAPPLRM True PC9_epitope_Rep5 877.48439377753 877.48328993586 93.34 2 -1.5205978646529592 0.41087172841506026 1.0 ['ENSG00000077264|ENST00000372007|PAK3', 'nc|ENSG00000077264|O75914|PAK3', 'nc|ENSG00000077264|O75914-4|PAK3', 'nc|ENSG00000077264|O75914-3|PAK3'] 83194 15481 PYYRENQQRWQ True PC9_epitope_Rep5 1566.7327736396599 1566.73166993586 64.559 2 -1.5206096135889642 0.41087172841506026 1.0 ['ENSG00000170608|ENST00000302177|FOXA3'] 137547 12213 YLRNELPTV True PC9_epitope_Rep4 1103.59750895347 1103.59640993586 54.797 2 -1.520614094742609 0.41087172841506026 1.0 ['ENSG00000130119|ENST00000360845|GNL3L', 'ENST00000462279.5_1_5:60188520-60189039:-|nuORF'] 63518 5638 LPKGNSTSIL True H1975_Epitope_Rep3 1028.5866099165999 1028.58550993586 26.724 2 -1.5206284227524975 0.41087172841506026 1.0 ['SLC26A8|p.A276G|1|0.32|ENSG00000112053|chr6:35991774-35991774|G/C|missense_variant'] 88675 3633 RCAPRGKA True PC9_epitope_Rep1 857.4653896684499 857.46428993586 18.895 2 -1.5206959912501963 0.4109037475847227 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF'] 637 7143 AATCGHTEVP True PC9_epitope_Rep3 984.43348040348 984.43238993586 32.488 2 -1.520698386288443 0.4109037475847227 1.0 ['nc|ENSG00000142949|P10586-2|PTPRF', 'ENSG00000142949|ENST00000359947|PTPRF', 'ENST00000477970.1_1_1:44078891-44086093:+|nuORF'] 69017 15986 LVHHLTFQAR True PC9_epitope_Rep1 1220.67782496284 1220.67672993586 66.299 2 -1.5207143830038388 0.4109037475847227 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 44360 9955 IMTVRKAL True NCI_RA007_Epitope_Rep1 930.5684577546599 930.56736993586 42.727 2 -1.5208248601318732 0.4109452736318408 1.0 ['ENSG00000124089|ENST00000243911|MC3R'] 13932 23133 DRFHVSPDPSV True NCI_RA007_Epitope_Rep5 1254.59929985862 1254.59764490379 96.235 3 -1.5212059673586724 0.4110072425203045 1.0 ['ENSG00000151651|ENST00000445355|ADAM8', 'nc|ENSG00000151651|P78325-2|ADAM8', 'nc|ENSG00000151651|P78325-3|ADAM8', 'ENST00000537099.5_1_10:135085588-135089062:-|nuORF', 'ENST00000561175.1_1_10:135085308-135086059:-|nuORF'] 36757 17828 GVPDAGMK True NCI_RA007_Epitope_Rep3 773.37417462221 773.37362496793 78.17 1 -1.5212178505918645 0.4110072425203045 1.0 ['ENST00000492361.1_1_1:12227075-12267074:+|nuORF', 'ENSG00000028137|ENST00000376259|TNFRSF1B'] 41943 8270 IEARRRAH True H1975_Epitope_Rep3 1007.5736942474698 1007.57258993586 36.792 2 -1.5213264259186332 0.4110072425203045 1.0 ['ENSG00000080200|ENST00000389622|CRYBG3'] 33032 12397 GIYTGLSAGL True PC9_epitope_Rep4 950.50729696674 950.50618993586 55.49 2 -1.5213349787792447 0.4110072425203045 1.0 ['ENSG00000108528|ENST00000225665|SLC25A11'] 69722 13658 LWEPALIAF True PC9_epitope_Rep4 1058.5800679841798 1058.5789699358602 60.427 2 -1.5213634858398795 0.41101405680569214 1.0 ['ENST00000372684.7_1_1:41107422-41131173:-|nuORF'] 16592 5553 EERPQLSDDER True H1975_Epitope_Rep1 1372.6218857779998 1372.62078993586 26.425 2 -1.5214235606368751 0.4110208709334074 1.0 ['nc|ENSG00000166477|Q8WVC0-2|LEO1', 'ENSG00000166477|ENST00000299601|LEO1'] 11136 20965 DEEQKPEQR True PC9_epitope_Rep5 1157.5312798684497 1157.53018993586 85.702 2 -1.5214876082335749 0.41104606770170526 1.0 ['LAIR1|p.Q207E|1|0.14|ENSG00000167613|chr19:54356363-54356363|G/C|missense_variant'] 61063 11875 LLAVGRVT True PC9_epitope_Rep5 827.5228874612301 827.5217899358599 50.675 2 -1.5214932494513516 0.41104606770170526 1.0 ['ENST00000528796.5_1_11:3400300-3400357:-|nuORF'] 64647 12740 LRHKKMGRSC True PC9_epitope_Rep4 1214.6488504170197 1214.64774993586 56.863 2 -1.5215108800570105 0.41105288122259626 1.0 ['ENST00000380629.6_1_8:26248887-26265531:+|nuORF'] 114184 9417 TRTNEGPLIV True PC9_epitope_Rep2 1098.6033226098998 1098.6022299358601 41.562 2 -1.5215465867329308 0.41105493920708924 1.0 ['STAT1|p.D627Tfs*31|1|0.13|ENSG00000115415|chr2:190976999-190977020|AGGGTTCAACCGCATGGAAGTC/-|frameshift_variant', 'nc|ENSG00000115415|P42224-2|STAT1', 'ENSG00000115415|ENST00000361099|STAT1'] 61799 19520 LLKMEVEQLK True PC9_epitope_Rep5 1229.70534515029 1229.7042499358602 80.138 2 -1.521657547943032 0.41105493920708924 1.0 ['ENSG00000167083|ENST00000507680|GNGT2'] 55040 7609 LALFGRAS True PC9_epitope_Rep4 833.47593726881 833.47484993586 36.649 2 -1.5217661616373073 0.41106856541304676 1.0 ['ENST00000527587.5_1_20:57288690-57290379:+|nuORF', 'nc|ENSG00000215440|Q8NDH3-5|NPEPL1', 'nc|ENSG00000215440|Q8NDH3-4|NPEPL1', 'ENSG00000215440|ENST00000356091|NPEPL1', 'ENST00000529976.5_1_20:57290178-57290379:+|nuORF'] 81140 21898 PPIMLIGH True PC9_epitope_Rep3 876.4891448047999 876.48804993586 89.535 2 -1.521777247250601 0.41106856541304676 1.0 ['ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 126777 8375 VPSLVASIG True PC9_epitope_Rep5 841.49091862661 841.48982993586 37.157 2 -1.5218513937741132 0.4110869464624497 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'ENST00000561258.1_1_15:62276000-62283926:-|nuORF'] 28231 23837 FRRYLSVFF True PC9_epitope_Rep4 1233.66586329681 1233.66421490379 100.11 3 -1.5219028528521783 0.4110937590375383 1.0 ['ENSG00000121807|ENST00000445132|CCR2'] 86205 17643 QPVSDKYF True PC9_epitope_Rep2 982.47599683846 982.47488993586 73.144 2 -1.5221450710405577 0.4111005714550124 1.0 ['ENSG00000114124|ENST00000682958|GRK7'] 56817 15432 LECGHHQREV True PC9_epitope_Rep2 1206.55638950082 1206.5552899358602 64.637 2 -1.522305701059454 0.4111189514962925 1.0 ['ENST00000598178.1_1_19:41128811-41129744:+|nuORF'] 36509 6436 GVKGAKIK True PC9_epitope_Rep6 799.5279728416699 799.52686993586 33.382 2 -1.5224772733969336 0.4111224206532803 1.0 ['nc|ENSG00000165119|P61978-3|HNRNPK', 'nc|ENSG00000165119|P61978|HNRNPK', 'ENSG00000165119|ENST00000376263|HNRNPK'] 9621 10039 AYFLYQQQ True PC9_epitope_Rep2 1059.50254593947 1059.5014499358601 43.939 2 -1.5224881834787511 0.4111224206532803 1.0 ['nc|ENSG00000019582|P04233-5|CD74', 'nc|ENSG00000019582|P04233-2|CD74', 'nc|ENSG00000019582|P04233-4|CD74', 'ENSG00000019582|ENST00000009530|CD74', 'ENST00000517791.1_1_5:149786694-149792396:-|nuORF', 'ENST00000523836.5_1_5:149785806-149792312:-|nuORF', 'nc|ENSG00000019582|P04233-3|CD74', 'ENST00000522153.1_1_5:149786338-149792312:-|nuORF'] 101719 5305 SPGPQPGI True NCI_RA007_Epitope_Rep4 751.3864535580699 751.38534993586 26.961 2 -1.522550975362449 0.4111224206532803 1.0 ['ENST00000262525.5_1_16:30798463-30798502:-|nuORF'] 114604 16704 TSLRVGRK True NCI_RA007_Epitope_Rep4 915.5613982282699 915.56030993586 72.433 2 -1.5225595301554984 0.4111224206532803 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 60692 20544 LIWEVLWV True PC9_epitope_Rep1 1056.60080342876 1056.5997099358601 83.834 2 -1.5225654764643113 0.4111224206532803 1.0 ['ENST00000216733.7_1_14:23834263-23834767:-|nuORF'] 12827 8849 DLKLAMENYI True H1975_Epitope_Rep3 1208.61111041228 1208.61000993586 39.043 2 -1.5226557984215523 0.4111224206532803 1.0 ['DOT1L|p.V59I|1|0.04|ENSG00000104885|chr19:2185904-2185904|G/A|missense_variant'] 138675 4858 YRSWREDK True H1975_Epitope_Rep1 1138.5519557433797 1138.55084993586 23.765 2 -1.5226748750031394 0.4111224206532803 1.0 ['ENST00000418040.5_1_7:134331590-134346220:+|nuORF'] 81784 3537 PSEPLNAWVPP True H1975_Epitope_Rep3 1205.60807363717 1205.60641490379 18.562 3 -1.5227060901078469 0.4111224206532803 1.0 ['ENST00000476975.5_1_2:97498263-97499261:-|nuORF'] 128258 6284 VSAELLGLP True H1975_Epitope_Rep3 897.5171333744499 897.51602993586 29.176 2 -1.5227317735810002 0.4111224206532803 1.0 ['ENST00000574767.5_1_17:78519031-78519253:+|nuORF'] 88620 25077 RAPITYKT True NCI_RA007_Epitope_Rep5 948.53926580136 948.5387149679301 103.96 1 -1.5227883290770978 0.4111523647593601 1.0 ['ENST00000404404.5_1_7:5037114-5037204:+|nuORF'] 108122 13332 TDPAGGLC True NCI_RA007_Epitope_Rep3 732.3112400124801 732.3106949679301 59.71 1 -1.5228057885530364 0.41115917555344794 1.0 ['ENST00000430365.6_1_3:11643369-11685017:-|nuORF'] 133584 18147 WIFRPLYLFFF True PC9_epitope_Rep1 1547.8329286219093 1547.83182993586 74.592 2 -1.5228930535078624 0.4111727966689799 1.0 ['ENST00000508170.5_1_4:55131036-55131279:+|nuORF'] 121569 18332 VGKSLKDL True PC9_epitope_Rep2 858.51746772762 858.51636993586 75.843 2 -1.5229165207939035 0.4111727966689799 1.0 ['ENST00000403332.2_1_6:129478670-129479855:-|nuORF'] 89680 23685 REVYNAKHH True NCI_RA007_Epitope_Rep3 1152.57883919756 1152.57718490379 102.69 3 -1.522952982011384 0.411179606990435 1.0 ['ENSG00000152611|ENST00000651391|CAPSL'] 138642 24618 YRRQLQARTIE True NCI_RA007_Epitope_Rep1 1432.7898945929594 1432.7887899358602 101.96 2 -1.5232040420430433 0.41119668794523084 1.0 ['ENSG00000148798|ENST00000369849|INA'] 88816 23863 RDSSKREGLLA True PC9_epitope_Rep2 1230.66804812478 1230.6669499358602 97.259 2 -1.5232104070183732 0.41119668794523084 1.0 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 45496 11986 ISEQWRFQVIH True NCI_RA007_Epitope_Rep1 1441.74663279865 1441.74552993586 50.609 2 -1.5232355848284829 0.41119668794523084 1.0 ['ENST00000325875.7_1_9:86595761-86614663:+|nuORF', 'ENST00000445877.5_1_9:86595660-86614660:+|nuORF'] 100400 21606 SLNRPRFR True PC9_epitope_Rep3 1044.59409533888 1044.59298993586 88.405 2 -1.5232770630327865 0.41119668794523084 1.0 ['ENST00000520312.1_1_8:89554881-89721577:+|nuORF', 'ENST00000518631.1_1_8:89554881-89555040:+|nuORF', 'ENST00000521433.1_1_8:89341227-89721666:+|nuORF'] 60409 17721 LIKEHTKI True PC9_epitope_Rep4 980.60186605792 980.60076993586 76.188 2 -1.52331777972397 0.41119668794523084 1.0 ['ENST00000505150.5_1_4:169411574-169413987:-|nuORF'] 79428 21364 PGPFSPPV True PC9_epitope_Rep3 796.41194002992 796.41084993586 87.474 2 -1.523375268015441 0.41119668794523084 1.0 ['nc|ENSG00000105426|Q13332-3|PTPRS', 'nc|ENSG00000105426|Q13332-4|PTPRS', 'ENSG00000105426|ENST00000262963|PTPRS', 'nc|ENSG00000105426|Q13332-6|PTPRS', 'nc|ENSG00000105426|Q13332-2|PTPRS'] 63998 7153 LQATMVYIL True H1975_Epitope_Rep1 1050.5783537320199 1050.5772499358602 32.538 2 -1.52338336186655 0.41119668794523084 1.0 ['ENST00000426128.6_1_7:108155685-108155751:-|nuORF'] 29093 8473 FTQKLRSP True PC9_epitope_Rep5 975.5501648382299 975.54906993586 37.534 2 -1.5234172233210939 0.41119668794523084 1.0 ['ENST00000373883.3_1_2:220408769-220409425:+|nuORF', 'ENST00000421791.1_3_2:220408769-220409493:+|nuORF', 'ENST00000344458.6_1_2:220408458-220409493:+|nuORF'] 78554 8947 PDNLWASKNYY True PC9_epitope_Rep5 1369.63026563373 1369.62862490379 39.357 3 -1.5234628091864044 0.41119668794523084 1.0 ['ENSG00000221843|ENST00000447166|C2orf16', 'nc|ENSG00000221843|Q68DN1|SPATA31H1'] 119980 19199 VFAAYGGL True PC9_epitope_Rep3 796.4119400299198 796.41084993586 79.066 2 -1.5236274193343735 0.41119668794523084 1.0 ['ENSG00000141232|ENST00000499247|TOB1'] 68940 25264 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 105.97 3 -1.523676972346506 0.41119668794523084 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 47833 5590 IYSSMVSQLY True NCI_RA007_Epitope_Rep1 1189.56891124713 1189.5678099358602 25.808 2 -1.5239660867677256 0.41125385940770376 1.0 ['nc|ENSG00000041515|Q9Y6X6-4|MYO16', 'MYO16|p.T705Qfs*8|1|0.13|ENSG00000041515|chr13:108962446-108962446|A/-|frameshift_variant', 'MYO16|p.L752Ffs*14|1|0.13|ENSG00000041515|chr13:108964849-108964850|-/T|frameshift_variant', 'ENST00000375857.6_1_13:109445985-109707944:+|nuORF', 'nc|ENSG00000041515|Q9Y6X6-3|MYO16', 'nc|ENSG00000041515|Q9Y6X6-2|MYO16', 'MYO16|p.V1625Wfs*16|1|0.49|ENSG00000041515|chr13:109141146-109141146|C/-|frameshift_variant', 'MYO16|p.A1658Rfs*45|1|0.14|ENSG00000041515|chr13:109141243-109141244|-/C|frameshift_variant', 'nc|ENSG00000041515|Q9Y6X6|MYO16', 'ENSG00000041515|ENST00000457511|MYO16'] 116311 21455 TVWDPLWSR True PC9_epitope_Rep6 1158.5821932425 1158.58054490379 95.402 3 -1.5239778821284082 0.41125385940770376 1.0 ['ENST00000391833.5_1_19:50377435-50377513:-|nuORF'] 115506 8561 TVGLGHGGPQD True H1975_Epitope_Rep2 1036.49377216092 1036.49266993586 37.883 2 -1.5240154512288724 0.41125385940770376 1.0 ['ENST00000562435.5_1_16:47165930-47177876:-|nuORF'] 140210 3981 YWGPPFLQ True H1975_Epitope_Rep1 1006.4912529797798 1006.49014993586 20.111 2 -1.5240283624857627 0.41125385940770376 1.0 ['nc|ENSG00000124155|Q969N2-6|PIGT', 'nc|ENSG00000124155|Q969N2-5|PIGT', 'ENSG00000124155|ENST00000279036|PIGT'] 18306 8761 EITETDTRAL True PC9_epitope_Rep1 1147.57208205127 1147.57098993586 38.538 2 -1.5240348781130921 0.41125385940770376 1.0 ['nc|ENSG00000105967|O14948-3|TFEC', 'nc|ENSG00000105967|O14948-4|TFEC', 'nc|ENSG00000105967|O14948-2|TFEC', 'ENSG00000105967|ENST00000265440|TFEC'] 27370 21282 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 88.909 2 -1.5241513002997769 0.4112674753408342 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 45235 11936 IRNRITYSQ True NCI_RA007_Epitope_Rep3 1149.62545503681 1149.62380490379 54.077 3 -1.5241768118245949 0.4112674753408342 1.0 ['ENSG00000203668|ENST00000366553|CHML'] 97762 16919 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 71.84 2 -1.524247943838542 0.41129265387773034 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 123731 4446 VIQSYNIR True NCI_RA007_Epitope_Rep3 991.5450794577899 991.5439899358599 24.29 2 -1.5242635761927028 0.41129265387773034 1.0 ['nc|ENSG00000077522|P35609-2|ACTN2', 'ENSG00000077522|ENST00000366578|ACTN2'] 134137 9542 WRERWQEYFTF True H1975_Epitope_Rep1 1646.76301113878 1646.76190993586 41.627 2 -1.524697874942591 0.41135252014846846 1.0 ['ENST00000367103.3_1_1:206907394-206907589:+|nuORF'] 121090 10616 VGGAGPPP True NCI_RA007_Epitope_Rep5 650.33877508966 650.33822496793 47.472 1 -1.5246985610324453 0.41135252014846846 1.0 ['ENSG00000099203|ENST00000214869|TMED1'] 69429 8693 LVRLPVEKESW True NCI_RA007_Epitope_Rep1 1354.76088588046 1354.7592449037902 37.815 3 -1.5247344514207901 0.41137088941307065 1.0 ['LRRK2|p.H2206R|1|0.15|ENSG00000188906|chr12:40354339-40354339|A/G|missense_variant'] 130511 14719 VTVVTGNRTI True PC9_epitope_Rep2 1058.60840799034 1058.60730993586 61.885 2 -1.5248170165370145 0.41139606410286056 1.0 ['ENSG00000187857|ENST00000641576|OR6C75'] 73201 6374 NEFEWEDDLPK True H1975_Epitope_Rep3 1420.61467513924 1420.6135699358601 29.501 2 -1.5248853028971991 0.41139606410286056 1.0 ['ENST00000560458.5_1_15:59970098-59981480:-|nuORF', 'ENSG00000140299|ENST00000607373|BNIP2', 'nc|ENSG00000140299|Q12982-2|BNIP2'] 108890 7851 TESAWERGLRH True PC9_epitope_Rep5 1340.65854607024 1340.65690490379 35.141 3 -1.524991245450957 0.4114069671988993 1.0 ['ENSG00000158545|ENST00000301011|ZC3H18'] 41081 3258 HYLEFEKTRYE True NCI_RA007_Epitope_Rep2 1513.7201432672898 1513.71850490379 17.329 3 -1.525024471854176 0.4114069671988993 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 121339 4992 VGHRATAL True PC9_epitope_Rep2 823.46643521427 823.46532993586 24.573 2 -1.5250310640398772 0.4114069671988993 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 28691 17354 FSTFTITRL True PC9_epitope_Rep1 1084.59169529704 1084.5905899358602 71.563 2 -1.5250428451242994 0.4114069671988993 1.0 ['nc|ENSG00000104774|O00754-2|MAN2B1', 'ENSG00000104774|ENST00000456935|MAN2B1', 'ENST00000469423.1_1_19:12757436-12758173:-|nuORF'] 124755 23860 VLKKVIRHKRQ True H1975_Epitope_Rep2 1403.9201209168698 1403.9184749037902 98.288 3 -1.5250585487410098 0.4114069671988993 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 98308 8705 SIFWLMHL True PC9_epitope_Rep4 1045.54190865365 1045.5408099358601 40.979 2 -1.5251786400690726 0.4114552622755599 1.0 ['ENST00000369109.7_1_1:150239761-150239875:-|nuORF'] 33709 13944 GLQMASRYTV True PC9_epitope_Rep6 1124.5648289261999 1124.56372993586 65.484 2 -1.5252059519117966 0.4114552622755599 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 122117 8089 VGRGNYEELEN True PC9_epitope_Rep1 1278.5840437173 1278.5829499358601 35.938 2 -1.5252557440228243 0.41146206673295255 1.0 ['ENSG00000170006|ENST00000304385|TMEM154'] 67907 15647 LTLCLSSRSV True PC9_epitope_Rep1 1077.58523001761 1077.5841299358601 65.007 2 -1.5254423711859586 0.41149199375686457 1.0 ['ENST00000473996.1_1_3:48454981-48455344:-|nuORF'] 133616 6772 WKDHWWSALQP True NCI_RA007_Epitope_Rep2 1452.6938689498 1452.69223490379 30.956 3 -1.5254703631472155 0.41149879763226044 1.0 ['CUX1|p.V828L|1|0.57|ENSG00000257923|chr7:102201779-102201779|G/T|missense_variant'] 131669 21629 VWLKILLD True PC9_epitope_Rep3 998.6164534928998 998.6159049679301 88.495 1 -1.5255208058050385 0.4115171624449403 1.0 ['BNC2|p.R185W|1|0.45|ENSG00000173068|chr9:16552646-16552646|G/A|missense_variant'] 93762 6414 RTSSTPEP True PC9_epitope_Rep6 873.4192102383299 873.41810993586 33.287 2 -1.5256121982387814 0.4115355268329904 1.0 ['nc|ENSG00000158816|Q5TIE3-4|VWA5B1'] 123613 10804 VIKVVKGG True NCI_RA007_Epitope_Rep5 798.5327238689398 798.53162993586 48.192 2 -1.5258862341905959 0.41160422181889644 1.0 ['ENSG00000111331|ENST00000228928|OAS3'] 48112 26507 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 109.13 3 -1.5259266910869125 0.41160422181889644 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 90963 4674 RLHHEEDGHV True PC9_epitope_Rep4 1227.57448209311 1227.5728349037902 24.508 3 -1.5259570262501692 0.41160422181889644 1.0 ['ENST00000298573.8_1_12:12633165-12633258:-|nuORF'] 120992 7341 VGEVITGGQ True PC9_epitope_Rep4 858.4446967101799 858.44358993586 35.566 2 -1.5260433836688179 0.41160422181889644 1.0 ['ENSG00000129295|ENST00000620350|DNAAF11', 'nc|ENSG00000129295|Q86X45-2|DNAAF11'] 130521 5301 VTWHVPIDCIL True NCI_RA007_Epitope_Rep2 1294.6743793751798 1294.6727249037901 25.243 3 -1.5260558885343023 0.41160422181889644 1.0 ['ENST00000518622.5_1_19:48714695-48714965:-|nuORF'] 119541 9174 VERCHCKF True NCI_RA007_Epitope_Rep5 1020.46334106312 1020.46224993586 41.938 2 -1.5261358580132822 0.4116225839267548 1.0 ['ENSG00000111186|ENST00000397196|WNT5B', 'ENST00000545747.1_1_12:1754224-1755415:+|nuORF'] 76136 19674 NRQIGKAMVRF True NCI_RA007_Epitope_Rep5 1318.7292089126997 1318.7275649037902 82.589 3 -1.5261434361209925 0.411625998404864 1.0 ['ENST00000373511.6_1_9:128200624-128200711:-|nuORF'] 125505 18386 VLVPRPSQVP True PC9_epitope_Rep1 1090.6498788795 1090.6487899358601 75.512 2 -1.5261490875512793 0.411625998404864 1.0 ['ENST00000526387.5_1_11:67177262-67177541:+|nuORF'] 68127 11816 LTPISMYSL True H1975_Epitope_Rep1 1023.5310691864299 1023.5299699358601 50.446 2 -1.5262164386784247 0.411625998404864 1.0 ['nc|ENSG00000151962|Q8TBY0-2|RBM46', 'nc|ENSG00000151962|Q8TBY0-3|RBM46', 'ENSG00000151962|ENST00000281722|RBM46'] 111631 10982 TLNRQKYRHVD True NCI_RA007_Epitope_Rep5 1428.75859446468 1428.7574899358601 48.879 2 -1.526237107429566 0.411625998404864 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 134647 14986 WWHRHHAWMTY True H1975_Epitope_Rep3 1609.71495583089 1609.71384993586 63.031 2 -1.5262550586870962 0.411625998404864 1.0 ['ENSG00000105509|ENST00000540069|HAS1', 'nc|ENSG00000105509|Q92839|HAS1'] 11024 14698 DDIGLVSL True PC9_epitope_Rep4 830.43854870058 830.43744993586 64.471 2 -1.526305825369759 0.411625998404864 1.0 ['SOS2|p.P1259*|1|0.09|ENSG00000100485|chr14:50118556-50118569|GAGGAGTGCTTGGC/-|frameshift_variant', 'ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 53135 23510 KSLESTTLTKK True PC9_epitope_Rep4 1234.7132669817 1234.7121699358602 98.734 2 -1.5263101452784817 0.411625998404864 1.0 ['CSRP2|p.E160K|1|0.45|ENSG00000175183|chr12:76859574-76859574|C/T|missense_variant'] 134995 24811 YAGLLGTI True NCI_RA007_Epitope_Rep1 806.4538048419 806.4532549679301 102.71 1 -1.5263195550979725 0.411625998404864 1.0 ['ENST00000474436.1_1_9:35090976-35092764:-|nuORF', 'ENST00000465745.6_1_9:35090240-35092764:-|nuORF', 'ENSG00000165282|ENST00000378617|PIGO'] 36318 4966 GVGSVAGIIH True NCI_RA007_Epitope_Rep1 908.50796567308 908.50686993586 23.399 2 -1.5263244620156209 0.411625998404864 1.0 ['nc|ENSG00000116539|Q9NR48|ASH1L', 'ENSG00000116539|ENST00000392403|ASH1L'] 45881 4879 ISQTKVAEL True NCI_RA007_Epitope_Rep3 987.5600608155898 987.55896993586 26.176 2 -1.5264424156090197 0.41167427613708607 1.0 ['nc|ENSG00000137171|Q9NSK0-5|KLC4', 'ENSG00000137171|ENST00000347162|KLC4', 'nc|ENSG00000137171|Q9NSK0-3|KLC4'] 29507 25070 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 105.53 3 -1.5265149457305796 0.41167427613708607 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 117527 15974 VAFLAKLR True H1975_Epitope_Rep2 916.5858220709599 916.58472993586 66.644 2 -1.5265565254456923 0.41167835966666283 1.0 ['ENST00000590574.5_2_19:11072039-11072372:+|nuORF'] 95942 4505 SDYSFSVIAMS True NCI_RA007_Epitope_Rep1 1205.52744035797 1205.52634993586 21.627 2 -1.5265962803462456 0.41167835966666283 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 82349 4901 PTTDVEKMFSV True H1975_Epitope_Rep3 1252.6009396514 1252.5998499358602 23.98 2 -1.5266143828928929 0.41167835966666283 1.0 ['KCNH5|p.T621Pfs*13|1|0.17|ENSG00000140015|chr14:62779886-62779886|T/-|frameshift_variant', 'ENST00000394964.3_1_14:63416779-63568536:-|nuORF', 'nc|ENSG00000140015|Q8NCM2-2|KCNH5', 'nc|ENSG00000140015|Q8NCM2-3|KCNH5', 'ENSG00000140015|ENST00000322893|KCNH5'] 77974 8601 PALHTAIN True PC9_epitope_Rep3 835.45520182423 835.45410993586 38.033 2 -1.5266168998865188 0.41167835966666283 1.0 ['ENSG00000169933|ENST00000675598|FRMPD4', 'nc|ENSG00000169933|Q14CM0|FRMPD4'] 15332 7760 EALARRQRHD True H1975_Epitope_Rep1 1250.65921477658 1250.65810993586 34.807 2 -1.5267930864461037 0.4117150749529016 1.0 ['ENST00000519973.5_1_8:23423709-23423784:+|nuORF'] 122416 16777 VGSIPLDP True PC9_epitope_Rep1 796.43306939732 796.43196993586 69.356 2 -1.5268166518079758 0.4117150749529016 1.0 ['ENST00000485832.1_1_7:128446807-128447827:+|nuORF'] 29506 24914 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 104.75 3 -1.5270137294007666 0.4117565474676961 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 130714 22940 VVDLIRLVL True PC9_epitope_Rep1 1038.68011637862 1038.6790099358602 93.04 2 -1.52702461647063 0.4117633461622921 1.0 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B', 'nc|ENSG00000084710|Q9Y2G0-3|EFR3B'] 66219 13218 LSPRVVDGI True PC9_epitope_Rep5 954.5498304850598 954.54872993586 55.85 2 -1.5270736121492712 0.4117701446997365 1.0 ['ENSG00000135519|ENST00000257981|KCNH3'] 125636 17718 VMGSVSSL True H1975_Epitope_Rep1 778.38949033318 778.38838993586 73.744 2 -1.5272220172341933 0.4118041350298744 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF', 'ENSG00000107816|ENST00000454422|LZTS2'] 44381 10928 INDSIVYL True PC9_epitope_Rep1 935.49639792987 935.49530993586 46.92 2 -1.527256330930444 0.4118041350298744 1.0 ['nc|ENSG00000177398|Q5DID0-3|UMODL1', 'ENSG00000177398|ENST00000408910|UMODL1', 'nc|ENSG00000177398|Q5DID0-4|UMODL1', 'nc|ENSG00000177398|Q5DID0-2|UMODL1', 'ENST00000400423.6_1_21:43540943-43557727:+|nuORF'] 71864 7471 MPLFHHQRI True NCI_RA007_Epitope_Rep3 1177.61786755857 1177.61676993586 36.507 2 -1.5272696601079019 0.4118041350298744 1.0 ['ENST00000545737.5_1_12:28410092-28458713:+|nuORF', 'ENST00000539107.5_2_12:28343406-28458716:+|nuORF'] 93242 19711 RRRRRRTRRAR True PC9_epitope_Rep4 1595.0053561492198 1595.0042499358601 83.941 2 -1.5272887345035535 0.4118041350298744 1.0 ['KDM2B|p.I399Mfs*82|1|0.34|ENSG00000089094|chr12:121510014-121510017|GTCT/-|frameshift_variant'] 112494 12088 TNRTTNEI True PC9_epitope_Rep1 947.46722305991 947.46612993586 51.356 2 -1.5272891861995173 0.4118041350298744 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1', 'nc|ENSG00000137812|Q8NG31-3|KNL1', 'nc|ENSG00000137812|Q8NG31-4|KNL1', 'ENST00000533001.1_1_15:40886490-40917961:+|nuORF'] 97501 20508 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 84.97 2 -1.5273980027904537 0.41180617351007154 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 39632 10037 HPPPLAFL True H1975_Epitope_Rep2 890.50142374066 890.50032993586 43.599 2 -1.5274656406018923 0.41180617351007154 1.0 ['ENST00000585091.1_1_17:79977083-79977522:-|nuORF'] 130823 24458 VVFILQKA True PC9_epitope_Rep4 916.57458868092 916.57348993586 102.56 2 -1.5274897656060882 0.41180821189603967 1.0 ['ENST00000507310.1_2_5:102482311-102483895:+|nuORF', 'ENST00000321521.13_1_5:102482350-102484949:+|nuORF'] 29516 25752 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 109.03 3 -1.527492718902352 0.41180821189603967 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 136797 8433 YISRMMHKSYI True NCI_RA007_Epitope_Rep5 1427.7053622336302 1427.70426993586 39.117 2 -1.527538672602303 0.41182656528069894 1.0 ['ENSG00000166396|ENST00000398019|SERPINB7', 'nc|ENSG00000166396|O75635-2|SERPINB7'] 9330 15183 AVSRDGFWPP True PC9_epitope_Rep6 1130.55089311422 1130.5497899358602 70.483 2 -1.5276966562095249 0.4118306408745291 1.0 ['ENST00000581471.2_1_18:5238694-5238925:+|nuORF'] 90244 22367 RHPIIPTW True H1975_Epitope_Rep1 1018.57123463598 1018.57012993586 93.065 2 -1.5277627199148196 0.4118306408745291 1.0 ['NR1H4|p.G48Dfs*66|2|0.3|ENSG00000012504|chr12:100510809-100510809|G/-|frameshift_variant'] 40513 21431 HSGALPFP True PC9_epitope_Rep6 824.4180880395201 824.41698993586 95.309 2 -1.5277697415459144 0.4118306408745291 1.0 ['ENSG00000076201|ENST00000265562|PTPN23'] 105568 19836 SVDSSWISW True PC9_epitope_Rep3 1065.4767251144501 1065.47562993586 81.534 2 -1.5277840220301464 0.4118306408745291 1.0 ['ENSG00000147457|ENST00000397677|CHMP7', 'ENST00000517325.5_1_8:23104188-23118109:+|nuORF'] 122798 12204 VGVLRSGAPL True PC9_epitope_Rep4 967.5814649665098 967.58036993586 54.762 2 -1.5278003708047856 0.4118326785301595 1.0 ['nc|nan|Q6P1X6-2|C8orf82', 'ENST00000313465.5_2_8:145752728-145753355:-|nuORF'] 122428 24944 VGSKNPTK True PC9_epitope_Rep5 829.46576650793 829.46521496793 101.12 1 -1.5278203054679194 0.4118326785301595 1.0 ['nc|ENSG00000112769|Q16363-2|LAMA4', 'nc|ENSG00000112769|Q16363|LAMA4', 'ENSG00000112769|ENST00000230538|LAMA4', 'LAMA4|p.P1437Hfs*28|1|0.1|ENSG00000112769|chr6:112122179-112122180|-/T|frameshift_variant'] 22462 18667 ETHDCNKS True NCI_RA007_Epitope_Rep5 932.3657947664801 932.36468993586 78.615 2 -1.5278275639670338 0.41183675355888333 1.0 ['ZNF804B|p.G876Afs*14|1|0.17|ENSG00000182348|chr7:89335607-89335607|G/-|frameshift_variant', 'ZNF804B|p.P1078Rfs*8|1|0.11|ENSG00000182348|chr7:89336214-89336214|C/-|frameshift_variant', 'ZNF804B|p.I1255Nfs*76|1|0.46|ENSG00000182348|chr7:89336744-89336745|-/A|frameshift_variant', 'ENSG00000182348|ENST00000333190|ZNF804B'] 125059 25118 VLPGKKKKKT True H1975_Epitope_Rep1 1125.75976368165 1125.75811490379 104.0 3 -1.5279371092380525 0.41183675355888333 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 139511 15979 YTKIFNDFK True PC9_epitope_Rep5 1174.60225998074 1174.60060490379 66.454 3 -1.5279936236716363 0.41183675355888333 1.0 ['nc|ENSG00000015171|Q15326-4|ZMYND11', 'nc|ENSG00000015171|Q15326-5|ZMYND11', 'nc|ENSG00000015171|Q15326-2|ZMYND11', 'nc|ENSG00000015171|Q15326-6|ZMYND11', 'nc|ENSG00000015171|Q15326-3|ZMYND11', 'ENSG00000015171|ENST00000381604|ZMYND11'] 58068 11345 LERPQIEA True PC9_epitope_Rep2 954.5134449763399 954.51234993586 48.958 2 -1.5280442019238034 0.41183675355888333 1.0 ['nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I'] 126621 9159 VPPSQPPP True PC9_epitope_Rep1 817.4334037504899 817.43230993586 40.081 2 -1.5280571894688826 0.41183879093198994 1.0 ['nc|ENSG00000120549|Q5T5P2-3|KIAA1217', 'ENSG00000120549|ENST00000376454|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-4|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-8|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-6|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-9|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-2|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-7|KIAA1217', 'nc|ENSG00000120549|Q5T5P2-10|KIAA1217'] 126211 7251 VPGSGESR True H1975_Epitope_Rep3 787.38243080679 787.38132993586 32.863 2 -1.5281080700196017 0.41183879093198994 1.0 ['ENST00000371600.7_1_9:139937867-139938101:-|nuORF'] 26691 14800 FLDDRHRWQRL True NCI_RA007_Epitope_Rep1 1540.801127983 1540.80002993586 61.627 2 -1.5281781926588955 0.4118476238893575 1.0 ['ENSG00000125650|ENST00000245810|PSPN'] 16988 15997 EGIAEWLRRR True H1975_Epitope_Rep3 1284.7051023398399 1284.70400993586 66.989 2 -1.5282009204677836 0.4118476238893575 1.0 ['nc|ENSG00000185615|Q13087-2|PDIA2', 'ENSG00000185615|ENST00000219406|PDIA2', 'ENST00000482665.1_1_16:334415-335240:+|nuORF'] 118542 12046 VDVHGIHFRK True H1975_Epitope_Rep1 1206.6621748986997 1206.66106993586 51.345 2 -1.5282017884053578 0.4118476238893575 1.0 ['ENSG00000110917|ENST00000228506|MLEC'] 81992 19469 PSSLLSRHFSW True NCI_RA007_Epitope_Rep5 1315.6673198487902 1315.66567490379 81.776 3 -1.528325539568377 0.41189111747851004 1.0 ['ENST00000393067.7_1_11:111223088-111223172:-|nuORF'] 7242 24256 ARGYLKTS True NCI_RA007_Epitope_Rep5 894.49231560894 894.49120993586 100.71 2 -1.5283587427693883 0.41189111747851004 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 98101 9824 SIADKRVE True PC9_epitope_Rep1 916.4977949121999 916.49668993586 42.649 2 -1.528364423535193 0.41189111747851004 1.0 ['ENSG00000118402|ENST00000369816|ELOVL4'] 25281 13681 FEDVAVNFTNR True H1975_Epitope_Rep3 1310.6255146064598 1310.62440993586 57.917 2 -1.5284147858898862 0.41189315340712157 1.0 ['ENST00000483450.1_1_6:28962780-28967471:-|nuORF', 'ENSG00000197935|ENST00000377179|ZNF311'] 134053 17171 WQIRQVRALL True NCI_RA007_Epitope_Rep4 1281.7669743204099 1281.76531490379 74.363 3 -1.5284328052324891 0.41189315340712157 1.0 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 100825 9963 SLRWEPPA True PC9_epitope_Rep5 954.4923156089399 954.49120993586 43.298 2 -1.5284713390742928 0.4119230547051008 1.0 ['nc|ENSG00000146904|P21709-2|EPHA1', 'nc|ENSG00000146904|P21709-3|EPHA1', 'ENSG00000146904|ENST00000275815|EPHA1', 'ENSG00000168334|ENST00000340369|XIRP1', 'nc|ENSG00000168334|Q702N8-2|XIRP1'] 907 4916 ADPDEIMWF True NCI_RA007_Epitope_Rep4 1122.46919720586 1122.46756490379 25.368 3 -1.5285345376630866 0.4119291597832742 1.0 ['ACOX1|p.K542Nfs*14|1|0.36|ENSG00000161533|chr17:75949319-75949319|T/-|frameshift_variant', 'nc|ENSG00000161533|Q15067-3|ACOX1', 'ENSG00000161533|ENST00000293217|ACOX1', 'ENST00000591857.5_1_17:73953534-73975166:-|nuORF', 'nc|ENSG00000161533|Q15067|ACOX1', 'ENST00000592329.1_1_17:73974613-73975103:-|nuORF', 'ENST00000589301.1_1_17:73953610-73974899:-|nuORF'] 9390 10395 AVVGGGESLWE True PC9_epitope_Rep1 1102.5294889632999 1102.52838993586 44.868 2 -1.5285591409527561 0.4119291597832742 1.0 ['ENST00000557600.5_1_14:94547684-94567230:+|nuORF'] 25734 17454 FFLIKWHILH True NCI_RA007_Epitope_Rep4 1352.7757480989599 1352.77464993586 75.572 2 -1.5285612274098692 0.4119291597832742 1.0 ['ENST00000340979.10_1_1:159024760-159024901:+|nuORF'] 136406 4961 YHESDTFRGYF True PC9_epitope_Rep4 1420.60477916188 1420.60312490379 25.687 3 -1.5286977538988895 0.4119291597832742 1.0 ['ENST00000548843.1_1_12:58200052-58208006:-|nuORF', 'AVIL-TSFM|1|fusion', 'AVIL|p.Y758Lfs*16|2|0.25|ENSG00000135407|chr12:57799867-57799868|AT/-|frameshift_variant', 'nc|ENSG00000135407|O75366-2|AVIL', 'ENST00000549851.5_1_12:58191667-58209405:-|nuORF', 'AVIL-TSFM|2|fusion', 'ENSG00000135407|ENST00000549994|AVIL'] 15804 20975 EDHELIYC True NCI_RA007_Epitope_Rep5 1020.42224701344 1020.42114993586 87.689 2 -1.5287112453560263 0.4119291597832742 1.0 ['ENSG00000171310|ENST00000303694|CHST11', 'nc|ENSG00000171310|Q9NPF2-2|CHST11'] 30748 5472 GANTTLLITI True H1975_Epitope_Rep2 1015.59136094387 1015.59026993586 26.074 2 -1.528736271705042 0.4119291597832742 1.0 ['ENSG00000180934|ENST00000641900|OR56A1', 'nc|ENSG00000180934|Q8NGH5|OR56A1', 'OR56A1|p.M42L|1|0.1|ENSG00000180934|chr11:6027569-6027569|T/A|missense_variant', 'OR56A1|p.L290*|1|0.41|ENSG00000180934|chr11:6026826-6026826|T/-|frameshift_variant', 'ENSG00000183389|ENST00000641156|OR56A4'] 85193 1565 QKENLRKFY True PC9_epitope_Rep3 1224.6615061923599 1224.6604099358601 8.6192 2 -1.5288662863545068 0.4119475058339687 1.0 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 79313 23646 PGKKSETPR True PC9_epitope_Rep4 998.5508931142199 998.54978993586 99.298 2 -1.5291005206415567 0.41198419666374014 1.0 ['ENST00000379593.1_1_X:20159744-20159861:-|nuORF'] 137255 21920 YLFWYRQT True PC9_epitope_Rep2 1175.5763795860698 1175.5752899358602 89.792 2 -1.5291018567654906 0.41198419666374014 1.0 ['nc|ENSG00000276953|A0A0B4J2E0|TRBV12-4'] 12782 16585 DLHYENFR True PC9_epitope_Rep2 1092.4988575413602 1092.49776993586 69.031 2 -1.529190690510377 0.41200933391862854 1.0 ['ENSG00000168385|ENST00000391971|SEPTIN2', 'nc|ENSG00000168385|Q15019-3|SEPTIN2', 'nc|ENSG00000168385|Q15019-2|SEPTIN2', 'ENST00000481500.1_1_2:242277175-242285749:+|nuORF'] 119136 5627 VEILEALSFSM True H1975_Epitope_Rep3 1237.62642612325 1237.62532993586 26.682 2 -1.5292020935041541 0.41200933391862854 1.0 ['CES3|p.S424Efs*27|1|0.12|ENSG00000172828|chr16:66971296-66971314|TCAGTTTTTCAAGATACCT/-|frameshift_variant'] 41080 3173 HYLEFEKTRYE True NCI_RA007_Epitope_Rep2 1513.7201432672898 1513.71850490379 16.987 3 -1.5293420601468524 0.4120181589252504 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 89552 11929 RERRLENTMKD True NCI_RA007_Epitope_Rep1 1446.7361447679398 1446.73450490379 50.386 3 -1.5293575865360771 0.4120181589252504 1.0 ['ENSG00000182150|ENST00000653738|ERCC6L2'] 33656 10143 GLPEVENLSK True H1975_Epitope_Rep3 1084.57643915572 1084.57534993586 44.059 2 -1.5293707345228131 0.4120181589252504 1.0 ['RB1|p.D394Tfs*10|1|0.75|ENSG00000139687|chr13:48373453-48373457|AAGTG/-|frameshift_variant', 'RB1|p.I425Sfs*32|1|0.24|ENSG00000139687|chr13:48376975-48376975|A/-|frameshift_variant', 'RB1|p.V742Ffs*2|1|0.27|ENSG00000139687|chr13:48465010-48465010|G/-|frameshift_variant', 'RB1|p.V735Lfs*10|1|0.49|ENSG00000139687|chr13:48463824-48463825|-/CT|frameshift_variant', 'ENSG00000139687|ENST00000267163|RB1', 'ITM2B-RB1|4|fusion', 'ITM2B-RB1|1|fusion'] 45587 4983 ISGNEYVYWYR True H1975_Epitope_Rep3 1448.67246479888 1448.6713699358602 24.296 2 -1.5294481534557485 0.41202495090678065 1.0 ['nc|ENSG00000211807|A0A087WT03|TRAV26-1'] 47048 26218 IVSRIQRYC True NCI_RA007_Epitope_Rep5 1136.6124478249599 1136.61134993586 108.44 2 -1.5294896770176707 0.41203853439911287 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF'] 68634 19861 LVALCCFLLRG True PC9_epitope_Rep3 1206.6617065164999 1206.66060993586 81.632 2 -1.5295385031485484 0.41203853439911287 1.0 ['ENSG00000112619|ENST00000230381|PRPH2'] 18974 13024 ELFQYISRYTP True H1975_Epitope_Rep3 1415.70851595443 1415.7074099358601 55.334 2 -1.5296219611669581 0.4120568768553706 1.0 ['nc|ENSG00000118096|Q9NQC8-2|IFT46', 'ENSG00000118096|ENST00000264021|IFT46', 'ENST00000531201.5_1_11:118415633-118427808:-|nuORF'] 29024 5412 FTKTSQKFGQW True H1975_Epitope_Rep1 1356.6826355597598 1356.68152993586 25.874 2 -1.5296895382158988 0.41206366807586575 1.0 ['nc|ENSG00000051128|Q9NSC5-4|HOMER3', 'nc|ENSG00000051128|Q9NSC5-3|HOMER3', 'nc|ENSG00000051128|Q9NSC5-2|HOMER3', 'ENSG00000051128|ENST00000392351|HOMER3', 'nc|ENSG00000152413|Q86YM7-3|HOMER1', 'nc|ENSG00000051128|Q9NSC5-5|HOMER3', 'ENSG00000103942|ENST00000450735|HOMER2', 'nc|ENSG00000103942|Q9NSB8|HOMER2', 'HOMER1-DMGDH|2|fusion', 'ENSG00000152413|ENST00000334082|HOMER1', 'nc|ENSG00000152413|Q86YM7-2|HOMER1', 'HOMER1-DMGDH|1|fusion'] 83549 5973 QDNWLRTNWVY True H1975_Epitope_Rep1 1493.70516190949 1493.7040699358602 28.046 2 -1.5297398944540597 0.41206569950101646 1.0 ['ENSG00000142627|ENST00000358432|EPHA2', 'nc|ENSG00000142627|P29317-2|EPHA2', 'EPHA2|p.G240Vfs*153|1|0.11|ENSG00000142627|chr1:16148482-16148482|C/-|frameshift_variant'] 135444 3834 YDYIWDFIFYP True NCI_RA007_Epitope_Rep2 1540.6914689079597 1540.68982490379 19.548 3 -1.5297453918710449 0.41206569950101646 1.0 ['AOC1|p.L708Wfs*7|1|0.34|ENSG00000002726|chr7:150861073-150861073|C/-|frameshift_variant', 'ENSG00000002726|ENST00000360937|AOC1', 'nc|ENSG00000002726|P19801-2|AOC1'] 73084 10455 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 45.23 1 -1.5299809135289308 0.4120677308323131 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 101309 18886 SLYHMYEPF True PC9_epitope_Rep4 1185.5164817514499 1185.5153899358602 80.731 2 -1.5300175065742891 0.4120677308323131 1.0 ['nc|ENSG00000224831|Q1AE95|TMEM183BP', 'ENSG00000163444|ENST00000367242|TMEM183A', 'nc|ENSG00000163444|Q8IXX5-2|TMEM183A'] 130314 3391 VTTNTTVP True NCI_RA007_Epitope_Rep2 831.43379767331 831.43270993586 17.849 2 -1.5302960558806626 0.41213633161244123 1.0 ['ENSG00000257743|ENST00000477922|MGAM2'] 21233 24217 ERFTYHNV True PC9_epitope_Rep4 1064.5039429218 1064.50284993586 101.63 2 -1.5303078038744364 0.41213633161244123 1.0 ['nc|ENSG00000172830|Q8TE77-3|SSH3', 'ENSG00000172830|ENST00000308127|SSH3', 'nc|ENSG00000172830|Q8TE77-5|SSH3', 'nc|ENSG00000172830|Q8TE77-2|SSH3'] 96869 16949 SESSERRTR True PC9_epitope_Rep5 1106.5428476116601 1106.54174993586 70.212 2 -1.5304038529674489 0.41213633161244123 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 27491 18488 FPDGFSQTRP True H1975_Epitope_Rep1 1150.5407223533398 1150.5396299358601 77.071 2 -1.5304738653559846 0.41213633161244123 1.0 ['ENST00000380599.8_1_17:7364268-7364400:-|nuORF'] 61183 12468 LLDLPTVVP True NCI_RA007_Epitope_Rep1 965.57973363101 965.57862993586 52.475 2 -1.5304850229063125 0.41213633161244123 1.0 ['ENST00000452346.6_2_3:111793214-111795796:+|nuORF'] 4155 24771 AHWRARRKL True NCI_RA007_Epitope_Rep1 1192.7053771233598 1192.70428993586 102.56 2 -1.5308649239739158 0.41221241799870645 1.0 ['ENSG00000170846|ENST00000635031|unknown', 'ENST00000307533.10_1_4:6675831-6676296:+|nuORF'] 5259 15539 ALRDEVPAL True PC9_epitope_Rep4 982.5447451046198 982.54364993586 67.695 2 -1.5309347957427397 0.41221506270352665 1.0 ['nc|ENSG00000204053|P12525|MYCLP1'] 137429 24490 YLLVRRVLH True H1975_Epitope_Rep1 1167.72404687927 1167.72241490379 101.5 3 -1.5309633869864778 0.41221506270352665 1.0 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 45518 10118 ISFARCFTQC True H1975_Epitope_Rep3 1174.5263352425 1174.52577496793 43.961 1 -1.5309933106547204 0.41221506270352665 1.0 ['OR5M11|p.G95R|1|0.16|ENSG00000255223|chr11:56542975-56542975|C/G|missense_variant'] 45585 13403 ISGNAANG True NCI_RA007_Epitope_Rep1 702.32966695794 702.3291149679301 56.138 1 -1.5310231847750804 0.41221506270352665 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.G241Efs*36|1|0.52|ENSG00000126259|chr19:35860343-35860343|G/-|frameshift_variant'] 114322 7046 TSCGWWPV True H1975_Epitope_Rep2 934.4007237232198 934.39962993586 32.028 2 -1.5310257236227374 0.41221506270352665 1.0 ['CDH23|p.S944Rfs*45|1|0.39|ENSG00000107736|chr10:71705009-71705009|C/-|frameshift_variant'] 140403 9602 YYFCRWYRNRK True H1975_Epitope_Rep1 1653.7986854548496 1653.79758993586 41.859 2 -1.53109938412174 0.41221506270352665 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 35992 2934 GVCMPVKR True NCI_RA007_Epitope_Rep1 888.4673638144 888.4662699358599 15.254 2 -1.5310995190721104 0.41221506270352665 1.0 ['ENST00000375859.3_1_9:91091428-91091536:+|nuORF'] 41502 7139 ICYQLYFC True NCI_RA007_Epitope_Rep1 1051.45071069075 1051.44960993586 31.759 2 -1.5311020655931387 0.41221506270352665 1.0 ['ENST00000394885.7_1_15:77241588-77241771:+|nuORF'] 95414 25144 SAKKPCPV True PC9_epitope_Rep1 828.4527592960799 828.45166993586 101.6 2 -1.5311312215932593 0.41221506270352665 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 97463 25414 SGHLLSTA True NCI_RA007_Epitope_Rep2 784.4079172786401 784.40682993586 107.26 2 -1.5311671663602258 0.41221506270352665 1.0 ['ENST00000481284.5_1_20:33462930-33515014:+|nuORF', 'ENSG00000131069|ENST00000360596|ACSS2', 'nc|ENSG00000131069|Q9NR19-2|ACSS2'] 100822 14275 SLRVQNSLRRR True NCI_RA007_Epitope_Rep2 1383.81711240031 1383.8160099358602 60.188 2 -1.5312023597864595 0.41221506270352665 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-1|RGS3', 'nc|ENSG00000138835|P49796-4|RGS3', 'ENST00000488620.5_1_9:116327559-116353744:+|nuORF'] 16275 7869 EEIHAFRQLE True H1975_Epitope_Rep3 1270.6305999868998 1270.6295099358601 35.244 2 -1.531202845792508 0.41221506270352665 1.0 ['nc|ENSG00000293505|Q96P88|GNRHR2'] 107058 8480 SYLPSIKEPER True PC9_epitope_Rep5 1317.69286589029 1317.69121490379 37.56 3 -1.5312881424522642 0.41221506270352665 1.0 ['ENSG00000165325|ENST00000298050|DEUP1', 'nc|ENSG00000165325|Q05D60-2|DEUP1'] 64671 21676 LRKIFKANH True H1975_Epitope_Rep2 1125.6770966868498 1125.67546490379 89.672 3 -1.531310620867573 0.41221506270352665 1.0 ['nc|ENSG00000132600|Q9NVM4-3|PRMT7', 'ENSG00000132600|ENST00000441236|PRMT7', 'PRMT7|p.H503Pfs*3|2|0.22|ENSG00000132600|chr16:68352340-68352355|GCACCTGGGGCCAGGT/-|frameshift_variant', 'nc|ENSG00000132600|Q9NVM4-4|PRMT7'] 20293 14008 EPALWPAERP True PC9_epitope_Rep6 1164.5927579261997 1164.5916699358602 65.737 2 -1.5314687335850385 0.4123026824790125 1.0 ['ENST00000560079.6_1_15:85327669-85327744:+|nuORF'] 20862 10370 EQRCPSDCH True H1975_Epitope_Rep3 1073.40186300537 1073.4007699358601 44.942 2 -1.53160326633586 0.4123345881157479 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 140890 22970 YYVDFFKT True PC9_epitope_Rep2 1081.51204799401 1081.51094993586 93.847 2 -1.531629412195767 0.4123345881157479 1.0 ['nc|ENSG00000132406|Q5BJH2-2|TMEM128', 'ENSG00000132406|ENST00000382753|TMEM128'] 104298 6009 SSEIWDLYFEM True H1975_Epitope_Rep2 1418.6064189546598 1418.60532993586 28.092 2 -1.5316436274698384 0.4123345881157479 1.0 ['ENST00000345122.7_1_14:32559748-32559826:+|nuORF'] 84283 7928 QEYKQKLAR True NCI_RA007_Epitope_Rep2 1162.6458561282197 1162.64474993586 35.469 2 -1.531671579292708 0.41233661262759225 1.0 ['ENST00000471511.1_1_20:36712307-36718274:+|nuORF'] 87679 9446 QVDERAKGNG True H1975_Epitope_Rep2 1072.52613491836 1072.5250299358602 41.301 2 -1.5316800576871052 0.41233661262759225 1.0 ['ENSG00000080371|ENST00000261263|RAB21'] 118688 17098 VEATLALL True PC9_epitope_Rep3 828.4956696538799 828.49456993586 70.918 2 -1.5317050732875244 0.4123379247439702 1.0 ['ENSG00000074181|ENST00000263388|NOTCH3'] 140456 21005 YYHISSSA True H1975_Epitope_Rep2 926.4133965819 926.41228993586 86.947 2 -1.5317190466782307 0.4123379247439702 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 83665 10033 QEAHWVLCEVL True PC9_epitope_Rep1 1325.6438075228898 1325.64270993586 43.46 2 -1.5317203555385421 0.4123379247439702 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 95114 22677 RYVFNQWWA True PC9_epitope_Rep4 1268.60907669668 1268.6079699358602 95.459 2 -1.5317480054153871 0.4123379247439702 1.0 ['ENST00000473034.5_1_2:219533245-219536693:-|nuORF'] 121337 4725 VGHRATAL True PC9_epitope_Rep2 823.46643521427 823.46532993586 23.546 2 -1.531779741659724 0.4123379247439702 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 30713 8168 GALSREERVE True H1975_Epitope_Rep1 1144.58364979448 1144.5830749679299 36.36 1 -1.531883935133609 0.4123379247439702 1.0 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant'] 25009 14070 FDDGDCCD True PC9_epitope_Rep1 888.226583982 888.22548993586 58.956 2 -1.5319454321742418 0.4123379247439702 1.0 ['PAPPA2|p.T777Lfs*31|1|0.24|ENSG00000116183|chr1:176690323-176690323|C/-|frameshift_variant', 'nc|ENSG00000116183|Q9BXP8-2|PAPPA2', 'PAPPA2|p.S1658Qfs*3|1|0.4|ENSG00000116183|chr1:176791428-176791428|C/-|frameshift_variant', 'ENSG00000116183|ENST00000367662|PAPPA2'] 89635 22940 RETPKGGV True H1975_Epitope_Rep1 842.4610154806597 842.45990993586 95.389 2 -1.5320897425181166 0.41237458580120767 1.0 ['ENSG00000159307|ENST00000360835|SCUBE1', 'SCUBE1|p.C187S|1|0.21|ENSG00000159307|chr22:43262770-43262770|C/G|missense_variant'] 57636 11849 LELTAC[Carbamidomethyl]EPL True PC9_epitope_Rep1 1044.51614767771 1044.5150499358601 50.442 2 -1.5321138514741393 0.41237458580120767 1.0 ['ENST00000343534.9_1_1:112020844-112021090:+|nuORF'] 26886 14216 FLFPHCLL True PC9_epitope_Rep1 988.52044493308 988.51934993586 59.504 2 -1.5322110378093785 0.41239493857947723 1.0 ['ENST00000426981.5_2_2:128396458-128396839:-|nuORF'] 79308 21313 PGKHRLGSLQV True NCI_RA007_Epitope_Rep2 1190.68838964654 1190.68728993586 88.18 2 -1.5322215796433223 0.41239493857947723 1.0 ['chr1:103745515-103750424|173|21.9|0.0|21.06|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|7', 'chr1:103745227-103750424|306|24.34|0.0|21.21|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|7', 'chr1:103651377-103750424|112|20.44|0.0|20.96|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|7', 'chr1:103651250-103750424|129|11.88|0.0|20.18|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|7', 'chr1:103651089-103750424|267|25.88|0.0|21.3|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|7'] 48101 3164 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 16.661 3 -1.5322264210148557 0.41239493857947723 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 22856 11392 EVEMTRMAV True PC9_epitope_Rep2 1064.49945178832 1064.49834993586 49.142 2 -1.532380876531334 0.4124363577588695 1.0 ['nc|ENSG00000165688|Q10713-2|PMPCA', 'ENST00000462616.1_1_9:139310627-139310981:+|nuORF', 'ENSG00000165688|ENST00000371717|PMPCA'] 121097 20031 VGGAWGSVPQ True PC9_epitope_Rep5 956.4715801643599 956.4710349679301 82.101 1 -1.5324506097177546 0.4124383795703021 1.0 ['ENST00000430886.5_1_22:38565377-38577774:-|nuORF'] 4542 19948 AKRKKSKKGNP True NCI_RA007_Epitope_Rep2 1240.7727879768397 1240.77115490379 82.594 3 -1.5324524618908442 0.4124383795703021 1.0 ['ENST00000426819.5_1_21:34911496-34915075:-|nuORF'] 132981 8444 VYVEGDIK True NCI_RA007_Epitope_Rep2 921.4807478657298 921.4801949679301 37.487 1 -1.5325098076736434 0.41244516277995846 1.0 ['ENST00000429744.2_1_1:52645740-52646091:+|nuORF'] 79538 23547 PGSAWDKV True H1975_Epitope_Rep3 858.42356734278 858.42301496793 98.249 1 -1.5326956576908441 0.41246349037762203 1.0 ['ENST00000431285.5_1_3:9439595-9466171:+|nuORF'] 21882 9983 ESEPEVKED True NCI_RA007_Epitope_Rep5 1060.4560492395199 1060.4549499358602 45.042 2 -1.5327885628842872 0.41248109711752684 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 133588 5819 WIFWLWWRACW True NCI_RA007_Epitope_Rep1 1651.79108089327 1651.78942490379 26.688 3 -1.5328746083830336 0.41248109711752684 1.0 ['ENSG00000268104|ENST00000598581|SLC6A14'] 24708 3986 FAVFRVKLTAK True PC9_epitope_Rep5 1278.7812274022197 1278.78012993586 20.411 2 -1.5328811271150133 0.41248109711752684 1.0 ['TMEM131|p.S1466Kfs*8|1|0.2|ENSG00000075568|chr2:97772348-97772349|-/T|frameshift_variant', 'ENSG00000075568|ENST00000186436|TMEM131'] 82718 7518 PVPSFSGK True PC9_epitope_Rep6 817.4334037504899 817.43230993586 38.176 2 -1.5328858987235916 0.41248109711752684 1.0 ['ENST00000540589.2_1_12:113357371-113369720:+|nuORF'] 103950 16600 SRPPRGVG True NCI_RA007_Epitope_Rep5 824.4616841869998 824.46058993586 70.612 2 -1.5329472281055878 0.41248109711752684 1.0 ['ENST00000505713.1_1_4:106394627-106395207:-|nuORF'] 44170 10496 ILQPGKTIVI True NCI_RA007_Epitope_Rep2 1080.69068106232 1080.68958993586 45.422 2 -1.5329663195250394 0.41248109711752684 1.0 ['nc|ENSG00000172673|Q8N1K5-3|THEMIS', 'nc|ENSG00000172673|Q8N1K5-2|THEMIS', 'ENSG00000172673|ENST00000368248|THEMIS', 'nc|ENSG00000172673|Q8N1K5-4|THEMIS'] 20720 14399 EQKWKWWEEER True H1975_Epitope_Rep3 1632.76849044204 1632.7673899358601 60.739 2 -1.53304535651854 0.4124878792076465 1.0 ['ENSG00000198900|ENST00000361337|TOP1'] 565 4061 AARGCFRRM True NCI_RA007_Epitope_Rep4 1066.52767265518 1066.5265699358602 21.891 2 -1.5331049768188303 0.412503462923631 1.0 ['ENST00000309971.8_1_9:131267149-131271258:+|nuORF'] 134846 5784 WYYYSLRFYST True H1975_Epitope_Rep1 1547.7085159544297 1547.70688490379 27.32 3 -1.5332208557570741 0.412503462923631 1.0 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 74849 9498 NLQEIRQLELV True H1975_Epitope_Rep3 1353.76161415645 1353.76050993586 41.539 2 -1.5332741319713465 0.412503462923631 1.0 ['ENSG00000164162|ENST00000507656|ANAPC10'] 94887 9753 RYPDMDTESR True PC9_epitope_Rep5 1268.5455500336 1268.54444993586 42.485 2 -1.533280000117206 0.412503462923631 1.0 ['ENSG00000166507|ENST00000309979|NDST2'] 83664 7267 QEAHWVLCEVL True NCI_RA007_Epitope_Rep2 1325.6438075228898 1325.64270993586 32.888 2 -1.5333800873660839 0.41253333025521455 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 44594 6226 IPGTEDYRSK True NCI_RA007_Epitope_Rep2 1164.5775017848798 1164.57640993586 28.824 2 -1.5333884807700837 0.4125353494546084 1.0 ['ENSG00000145147|ENST00000504154|SLIT2'] 52969 23509 KRMSVYVILV True PC9_epitope_Rep5 1206.7158502643401 1206.71419490379 95.409 3 -1.5334253245695166 0.4125353494546084 1.0 ['nc|ENSG00000249961|Q8NA31-3|TERB1', 'nc|ENSG00000249961|Q8NA31-2|TERB1', 'ENSG00000249961|ENST00000433154|TERB1'] 70780 6818 MEEKVWNHRWR True NCI_RA007_Epitope_Rep2 1569.7622999461298 1569.7606649037903 31.136 3 -1.5334850011829786 0.4125421302922573 1.0 ['ENST00000564353.5_1_15:74890891-74891065:+|nuORF'] 19675 18970 ELRYRDVQERY True H1975_Epitope_Rep3 1525.7637394147696 1525.76264993586 79.558 2 -1.5335400224302582 0.41256247186601874 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10', 'DNAH10|p.S2410Lfs*12|1|0.26|ENSG00000197653|chr12:123867998-123867998|C/-|frameshift_variant'] 62396 23679 LLRRRLRQWRW True NCI_RA007_Epitope_Rep5 1637.9855151380898 1637.98387490379 98.412 3 -1.5335428269961622 0.41256247186601874 1.0 ['ENST00000341285.7_2_4:15656858-15657005:-|nuORF'] 84442 24563 QGKAGGPA True PC9_epitope_Rep6 684.3554877829599 684.35493496793 108.8 1 -1.5335464253171978 0.41256247186601874 1.0 ['nc|ENSG00000173349|Q587I9|SFT2D3'] 12931 10811 DLNMESRPV True PC9_epitope_Rep4 1059.50189431647 1059.5007899358602 49.344 2 -1.5336592050052646 0.41258757401230367 1.0 ['ENST00000490777.2_10:133754324-133769464:+|nuORF', 'ENSG00000175470|ENST00000455566|PPP2R2D'] 9680 17821 AYGYDHSP True NCI_RA007_Epitope_Rep5 908.36644638948 908.36534993586 75.343 2 -1.533674776176969 0.41258757401230367 1.0 ['ENSG00000145391|ENST00000274031|SETD7'] 80588 11827 PLPAPRHPP True H1975_Epitope_Rep1 980.55558457184 980.55448993586 50.487 2 -1.5339001701229802 0.4126058955241107 1.0 ['ENST00000562955.2_2_1:43919018-43919642:+|nuORF'] 49461 9730 KITQLLKKHK True NCI_RA007_Epitope_Rep5 1235.8077765032301 1235.80612490379 44.051 3 -1.5339759015006609 0.4126146921345721 1.0 ['ENSG00000163623|ENST00000295886|NKX6-1'] 10523 19363 CPIFYMRKKVR True NCI_RA007_Epitope_Rep2 1439.78936664111 1439.7882699358602 80.221 2 -1.534017750157232 0.4126146921345721 1.0 ['ENSG00000062822|ENST00000440232|POLD1', 'ENST00000597963.5_1_19:50919583-50921201:+|nuORF', 'ENST00000596221.1_1_19:50920282-50921201:+|nuORF'] 28352 21037 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 87.928 2 -1.5341033406048428 0.4126146921345721 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 86131 23084 QPRHRSGRRM True H1975_Epitope_Rep1 1279.6792390285098 1279.6781499358601 95.991 2 -1.5342939273818432 0.41265609491494126 1.0 ['ENSG00000169594|ENST00000345382|BNC1'] 15717 24175 EDALLRRLRG True PC9_epitope_Rep4 1197.6942033029698 1197.69256490379 101.46 3 -1.5344679429642798 0.41269273381959193 1.0 ['UTP18|p.K544Qfs*6|2|0.53|ENSG00000011260|chr17:51294024-51294025|-/G|frameshift_variant', 'ENSG00000011260|ENST00000225298|UTP18'] 68912 23908 LVFAPGVP True NCI_RA007_Epitope_Rep2 798.4639756027799 798.4634249679301 100.37 1 -1.5344782010480547 0.41269273381959193 1.0 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2', 'nc|ENSG00000129219|O14939-3|PLD2', 'ENST00000574268.1_1_17:4710512-4711565:+|nuORF', 'PLD2|p.T76Qfs*77|1|0.12|ENSG00000129219|chr17:4808096-4808097|AT/-|frameshift_variant'] 92900 23566 RRPDQRRA True PC9_epitope_Rep2 1053.59040694077 1053.58930993586 96.122 2 -1.534520233587514 0.41270958584797884 1.0 ['ENST00000390551.6_1_14:106237055-106237666:-|nuORF'] 11559 10239 DGQELMFRGLH True H1975_Epitope_Rep3 1301.61865540421 1301.61754993586 44.432 2 -1.5345211176258 0.41270958584797884 1.0 ['nc|ENSG00000263528|Q14164-2|IKBKE', 'ENSG00000263528|ENST00000581977|IKBKE'] 115778 8087 TVLTPSAPPS True NCI_RA007_Epitope_Rep1 968.51786165044 968.51676993586 35.454 2 -1.5345262622723745 0.41270958584797884 1.0 ['ENST00000361866.7_1_21:47424611-47424767:+|nuORF'] 137247 21950 YLFKRFIF True PC9_epitope_Rep2 1132.64333694708 1132.64222993586 89.905 2 -1.5345618887151546 0.41270958584797884 1.0 ['ENST00000433529.6_1_2:70439571-70439754:-|nuORF'] 16 6983 AAAAAAPGPM True PC9_epitope_Rep1 826.4007237232199 826.39962993586 31.665 2 -1.5346428538696901 0.41270958584797884 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant'] 90772 3465 RKRMLSSSSEM True PC9_epitope_Rep3 1310.6434902530598 1310.6423899358601 18.453 2 -1.5346754628534778 0.41270958584797884 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 66030 7171 LSMSYYFDR True NCI_RA007_Epitope_Rep4 1180.5222954078802 1180.52118993586 34.207 2 -1.5347703796143328 0.41270958584797884 1.0 ['ENST00000533138.1_1_11:61732822-61734897:-|nuORF', 'ENST00000534719.1_1_11:61732389-61734897:-|nuORF', 'ENSG00000167996|ENST00000273550|FTH1'] 36307 22807 GVGQGPWP True H1975_Epitope_Rep1 796.3867879112399 796.38568993586 94.858 2 -1.5348138063515184 0.41270958584797884 1.0 ['nc|ENSG00000128604|Q13568-5|IRF5', 'nc|ENSG00000128604|Q13568-4|IRF5', 'nc|ENSG00000128604|Q13568|IRF5', 'nc|ENSG00000128604|Q13568-3|IRF5', 'ENSG00000128604|ENST00000357234|IRF5'] 80243 23734 PLCPHGPT True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 98.636 2 -1.5348182159185675 0.41270958584797884 1.0 ['ENST00000505451.5_1_4:25314431-25353701:+|nuORF', 'nc|ENSG00000168228|Q9H5U6-3|ZCCHC4', 'ENSG00000168228|ENST00000302874|ZCCHC4', 'nc|ENSG00000168228|Q9H5U6-2|ZCCHC4'] 80061 25712 PKGKPLAL True PC9_epitope_Rep1 822.5327238689399 822.53217496793 103.94 1 -1.5348329982694722 0.41270958584797884 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 14607 7213 DVIYQVKNDPF True H1975_Epitope_Rep1 1336.66631678928 1336.66520993586 32.756 2 -1.534889996446271 0.41270958584797884 1.0 ['L1M3_dup291|chr1:173794566-173795729:+|1.1397011898258065|0.3648644439828962|1.64|502.0|59|1|anti-sense'] 87159 23513 QSKNWIFIWL True PC9_epitope_Rep2 1333.7182927924898 1333.71664490379 95.915 3 -1.5349697589822024 0.41271636279713825 1.0 ['ENST00000360105.8_1_19:13136243-13184244:+|nuORF'] 33707 14779 GLQMASRYTV True PC9_epitope_Rep4 1124.5648289261999 1124.56372993586 64.778 2 -1.5350321838922858 0.41271837714338466 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 100853 8396 SLSEELQN True PC9_epitope_Rep4 918.4294405688601 918.42834993586 39.757 2 -1.5350370769540416 0.41271837714338466 1.0 ['ENSG00000198870|ENST00000371957|STKLD1'] 120557 23094 VGACHGPR True PC9_epitope_Rep2 795.3809913381499 795.3804449679301 94.321 1 -1.535071913634317 0.41272716783015057 1.0 ['ENSG00000178597|ENST00000319098|PSAPL1'] 30521 14199 GAIEHLKES True PC9_epitope_Rep4 982.5083595959 982.50726993586 62.524 2 -1.5351124507011709 0.41272716783015057 1.0 ['CEP128|p.E834Kfs*17|1|0.31|ENSG00000100629|chr14:80761490-80761490|C/-|frameshift_variant', 'nc|ENSG00000100629|Q6ZU80-1|CEP128', 'ENSG00000100629|ENST00000555265|CEP128', 'nc|ENSG00000100629|Q6ZU80-3|CEP128', 'CEP128|p.M633Nfs*17|2|0.24|ENSG00000100629|chr14:80785208-80785209|-/T|frameshift_variant', 'ENST00000554298.5_1_14:81372269-81405743:-|nuORF'] 17976 16447 EIGLLATV True PC9_epitope_Rep1 814.48001958974 814.47892993586 68.088 2 -1.5351414096119222 0.41272716783015057 1.0 ['nc|ENSG00000171723|Q9NQX3|GPHN', 'ENSG00000171723|ENST00000478722|GPHN', 'ENST00000555527.1_1_14:67579771-67631908:+|nuORF'] 34457 7189 GQAVGVRAL True PC9_epitope_Rep6 869.5083000262499 869.50720993586 36.738 2 -1.53517617013829 0.4127291818108392 1.0 ['ENST00000424383.4_1_7:1784183-1785002:+|nuORF'] 19467 7415 ELQDKFEHLKM True NCI_RA007_Epitope_Rep2 1416.7071360554398 1416.7060299358602 33.468 2 -1.5352072239805488 0.4127291818108392 1.0 ['ENSG00000154997|ENST00000388975|SEPTIN14'] 4939 8869 ALHPSETRTL True PC9_epitope_Rep2 1123.59857158263 1123.59746993586 39.468 2 -1.5353060902610918 0.4127359579083399 1.0 ['ENSG00000092470|ENST00000263795|WDR76', 'WDR76|p.L377Vfs*5|1|0.11|ENSG00000092470|chr15:43851183-43851184|CT/-|frameshift_variant'] 33619 9282 GLLSFEESQR True NCI_RA007_Epitope_Rep1 1164.57750178488 1164.57640993586 40.1 2 -1.535349047963804 0.4127379716164763 1.0 ['ENSG00000041802|ENST00000265245|LSG1'] 91164 4878 RLPFREVYLHA True PC9_epitope_Rep4 1399.7724536236701 1399.7707949037901 25.356 3 -1.5353763755819902 0.4127379716164763 1.0 ['ENSG00000204394|ENST00000375663|VARS1'] 80062 25792 PKGKPLAL True PC9_epitope_Rep1 822.5327238689399 822.53217496793 104.28 1 -1.5354679229283015 0.41274199875395157 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 12744 12232 DLGQCHSLW True PC9_epitope_Rep5 1057.46511488493 1057.46400993586 52.036 2 -1.5355307625168253 0.41274199875395157 1.0 ['ENST00000401867.5_1_5:131562537-131562693:-|nuORF'] 3508 7162 AGLQPTNL True PC9_epitope_Rep6 812.43921740692 812.43812993586 36.628 2 -1.5355786543349168 0.41274199875395157 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 11888 24286 DHQERMIRG True PC9_epitope_Rep3 1140.5458248171199 1140.54418490379 98.729 3 -1.5356070127890458 0.41274199875395157 1.0 ['ENST00000421692.5_2_6:30003742-30025305:-|nuORF', 'ENST00000431012.5_1_6:30024744-30025305:-|nuORF'] 101494 14423 SNWEVMERL True PC9_epitope_Rep1 1162.54409348162 1162.54243490379 60.302 3 -1.535622293951237 0.4127440121833033 1.0 ['ENSG00000197976|ENST00000313871|AKAP17A', 'nc|ENSG00000292343|Q02040-2|AKAP17A', 'nc|ENSG00000292343|Q02040-3|AKAP17A'] 111632 16858 TLNRQKYRHVD True PC9_epitope_Rep1 1428.75859446468 1428.7574899358601 69.668 2 -1.5356248612539998 0.4127440121833033 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 5188 17361 ALPIRHAP True PC9_epitope_Rep6 873.51847078713 873.51736993586 79.395 2 -1.5357399476275364 0.41278063637831974 1.0 ['ENST00000522398.5_1_8:67687459-67690210:+|nuORF'] 4362 20874 AIPSIMNVLL True PC9_epitope_Rep6 1069.62055289717 1069.61944993586 93.065 2 -1.5357859547649266 0.41278063637831974 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'ENSG00000185313|ENST00000449082|SCN10A'] 123010 14036 VGYALDYN True PC9_epitope_Rep4 913.41814760917 913.41704993586 61.9 2 -1.5358387951711143 0.41279894784203786 1.0 ['ENSG00000165704|ENST00000298556|HPRT1', 'ENSG00000099256|ENST00000320152|PRTFDC1'] 22429 22766 ETFRPKRGAA True H1975_Epitope_Rep3 1131.6148903531098 1131.61324490379 95.127 3 -1.5359351661477092 0.4128172588832487 1.0 ['ENST00000374791.7_1_11:132205045-132205564:+|nuORF'] 115753 12644 TVLPRNNF True PC9_epitope_Rep1 959.51886470995 959.51776993586 53.505 2 -1.5360076882512061 0.412824032948397 1.0 ['TMEM200A|p.S350F|1|0.35|ENSG00000164484|chr6:130441471-130441471|C/T|missense_variant'] 111625 10707 TLNRQKYRHVD True H1975_Epitope_Rep1 1428.75859446468 1428.7574899358601 46.143 2 -1.5361671790647211 0.41284435420608184 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 124875 5924 VLLLTGSGG True PC9_epitope_Rep2 815.47526856247 815.47416993586 28.178 2 -1.5362172765020152 0.41284435420608184 1.0 ['ACVR1B|p.A19T|1|0.5|ENSG00000135503|chr12:51951798-51951798|G/A|missense_variant'] 87163 5155 QSLAFSGAAL True NCI_RA007_Epitope_Rep5 963.5025459394699 963.50144993586 26.523 2 -1.5362401689837677 0.41284435420608184 1.0 ['ENSG00000155269|ENST00000382487|GPR78'] 131382 6424 VVSQPPDT True PC9_epitope_Rep3 841.41814760917 841.4175949679301 29.737 1 -1.5362532122625836 0.41285112764607484 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 32616 20452 GHFCLCPL True PC9_epitope_Rep6 888.39861554824 888.39750993586 91.384 2 -1.5363002798400565 0.4128531383021676 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 284 14895 AAGVLLHVSV True PC9_epitope_Rep1 964.57056592964 964.56946993586 62.114 2 -1.5363122215933835 0.4128531383021676 1.0 ['ENSG00000174165|ENST00000310442|ZDHHC24'] 42348 7940 IELREREIELL True NCI_RA007_Epitope_Rep1 1411.80347896843 1411.80184490379 34.877 3 -1.5365917899738324 0.41285991140642303 1.0 ['CEP135|p.R243L|1|0.26|ENSG00000174799|chr4:55964302-55964302|G/T|missense_variant'] 10276 3940 CGKAFGCKSNL True NCI_RA007_Epitope_Rep1 1126.5263352425 1126.5252299358601 19.361 2 -1.536672923832898 0.41286668435441637 1.0 ['ENSG00000177932|ENST00000315475|ZNF354C'] 93401 11309 RRWRYWEYWSW True PC9_epitope_Rep5 1772.83242811128 1772.8307849037901 48.492 3 -1.5367059204650222 0.4128842493800104 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 21210 19248 ERFLGRNSMEA True NCI_RA007_Epitope_Rep5 1308.6244690606402 1308.6228149037902 80.902 3 -1.5367427636665643 0.4128842493800104 1.0 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000367203.8_1_1:204082043-204086879:+|nuORF'] 34138 9819 GPDAVALRPE True PC9_epitope_Rep2 1023.53490869691 1023.53380993586 43.105 2 -1.5367439425297547 0.4128842493800104 1.0 ['ENST00000590602.5_1_17:76120219-76121039:-|nuORF', 'ENST00000586271.1_1_17:76120494-76121009:-|nuORF'] 53005 24643 KRRKRKTI True H1975_Epitope_Rep2 1084.73052924204 1084.72942993586 101.35 2 -1.536769571952044 0.4128842493800104 1.0 ['nc|ENSG00000151292|Q9Y6M4-6|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-5|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-3|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-4|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4|CSNK1G3', 'nc|ENSG00000151292|Q9Y6M4-2|CSNK1G3', 'ENSG00000151292|ENST00000696905|CSNK1G3'] 42475 10236 IEQSVYSSDP True PC9_epitope_Rep1 1123.50333378511 1123.5022299358602 44.254 2 -1.5368200094306124 0.4128842493800104 1.0 ['nc|ENSG00000162761|Q8TE12-2|LMX1A', 'ENSG00000162761|ENST00000342310|LMX1A'] 13596 5135 DPRLQEQPP True H1975_Epitope_Rep3 1078.5407223533398 1078.5396299358601 24.856 2 -1.536974284520274 0.4128842493800104 1.0 ['ENST00000470037.1_1_1:26358781-26358883:+|nuORF'] 36363 10979 GVHPAPGF True PC9_epitope_Rep2 780.39187329168 780.39076993586 47.553 2 -1.5369955758770282 0.41288477285570946 1.0 ['ENSG00000180667|ENST00000315927|YOD1'] 113252 14754 TQEKIWEFKGK True H1975_Epitope_Rep3 1392.7401504358797 1392.73904993586 62.129 2 -1.5370071538148469 0.41288477285570946 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 122592 26765 VGTGQKTT True H1975_Epitope_Rep1 790.41848196234 790.41738993586 111.47 2 -1.537065477761384 0.41288477285570946 1.0 ['ENST00000347708.4_1_8:145194626-145194866:+|nuORF'] 60572 17190 LIRGLLARPAK True H1975_Epitope_Rep3 1206.7924607922598 1206.79187496793 71.762 1 -1.537113906074646 0.41288477285570946 1.0 ['nc|ENSG00000115705|P07202-5|TPO', 'nc|ENSG00000115705|P07202-4|TPO', 'nc|ENSG00000115705|P07202-3|TPO', 'ENSG00000115705|ENST00000329066|TPO'] 30930 17087 GASGGGGD True PC9_epitope_Rep5 576.21396849936 576.2134249679301 70.746 1 -1.5371408312047432 0.41288477285570946 1.0 ['ENST00000521689.5_1_8:98881135-98900426:+|nuORF'] 82276 2742 PTNKQEAEIP True H1975_Epitope_Rep2 1125.56660274801 1125.56550993586 14.592 2 -1.5371636240122448 0.41288477285570946 1.0 ['ENSG00000116830|ENST00000369466|TTF2'] 122153 7997 VGRISRAQYNA True PC9_epitope_Rep4 1233.65781779425 1233.65672993586 38.211 2 -1.537295854285992 0.41288477285570946 1.0 ['STX11|p.A125G|1|0.37|ENSG00000135604|chr6:144187001-144187001|C/G|missense_variant'] 56371 21883 LDRRVVKGQV True PC9_epitope_Rep2 1168.7040397106798 1168.70294993586 89.649 2 -1.537308299611407 0.41288477285570946 1.0 ['ENSG00000094916|ENST00000209875|CBX5'] 24082 6661 EYQREGIPW True NCI_RA007_Epitope_Rep1 1176.5563724174797 1176.55526993586 29.921 2 -1.5373982120249048 0.41288477285570946 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'ENSG00000176658|ENST00000318217|MYO1D'] 64331 17359 LQNKRKRNF True NCI_RA007_Epitope_Rep3 1202.69962303658 1202.69852993586 76.176 2 -1.5373991161216816 0.41288477285570946 1.0 ['SLC10A5|p.D430N|1|0.23|ENSG00000253598|chr8:81693685-81693685|C/T|missense_variant'] 45641 15335 ISHSTTAL True NCI_RA007_Epitope_Rep5 828.43413202648 828.4335849679301 65.687 1 -1.537405617282876 0.41288477285570946 1.0 ['ENST00000374358.4_1_1:25687202-25687394:+|nuORF'] 55879 8129 LDFWYTYVY True PC9_epitope_Rep4 1268.57537652656 1268.57426993586 38.723 2 -1.5374474630924615 0.41288477285570946 1.0 ['OR9G4|p.S75Y|1|0.25|ENSG00000172457|chr11:56743543-56743543|G/T|missense_variant'] 103856 20011 SRKIQIRNIP True NCI_RA007_Epitope_Rep2 1223.74623887583 1223.7451499358601 82.84 2 -1.5375826744100942 0.41289831505380065 1.0 ['nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2', 'nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2', 'ENSG00000073792|ENST00000382199|IGF2BP2', 'chr3:185698347-185824783|138|12.49|0.35|5.17|-|1|IGF2BP2,IGF2BP2|1', 'chr17:48999169-49025618|251|20.38|0.07|8.13|+|1|IGF2BP1,IGF2BP1|1', 'ENST00000461957.5_1_3:185411014-185540996:-|nuORF', 'ENST00000466476.1_1_3:185414391-185542667:-|nuORF', 'ENST00000499130.6_1_17:47091311-47113981:+|nuORF', 'ENST00000515586.5_1_17:47075143-47113981:+|nuORF', 'ENSG00000159217|ENST00000290341|IGF2BP1', 'nc|ENSG00000159217|Q9NZI8-2|IGF2BP1'] 137550 22792 YLRRRAALE True PC9_epitope_Rep6 1146.6621748986997 1146.66052490379 100.76 3 -1.5375873206908746 0.41289831505380065 1.0 ['nc|ENSG00000182621|Q9NQ66-2|PLCB1', 'ENSG00000182621|ENST00000338037|PLCB1'] 14878 13932 DYGPFRDVP True H1975_Epitope_Rep1 1064.49270953176 1064.4916099358602 58.744 2 -1.5377873313497261 0.41293015960882 1.0 ['ENSG00000163902|ENST00000296255|RPN1', 'ESYT3-RPN1|1|fusion'] 127339 23943 VQNSLLAL True PC9_epitope_Rep2 856.5018176634799 856.50072993586 97.578 2 -1.5377961090211663 0.41293015960882 1.0 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 46847 20326 IVFKHFKRNK True PC9_epitope_Rep3 1315.7877097649896 1315.78660993586 83.434 2 -1.5378309166736885 0.41293015960882 1.0 ['SP100|p.G545Vfs*15|1|0.14|ENSG00000067066|chr2:230494448-230494448|G/-|frameshift_variant', 'nc|ENSG00000067066|P23497-3|SP100', 'nc|ENSG00000067066|P23497|SP100', 'ENSG00000067066|ENST00000340126|SP100', 'nc|ENSG00000067066|P23497-7|SP100', 'nc|ENSG00000067066|P23497-6|SP100', 'nc|ENSG00000067066|P23497-5|SP100', 'nc|ENSG00000067066|P23497-2|SP100'] 110815 21994 TKRLELKERP True PC9_epitope_Rep6 1268.7564692063597 1268.75536993586 97.522 2 -1.537921966009348 0.41293692987210684 1.0 ['ENSG00000101350|ENST00000375712|KIF3B', 'KIF3B|p.A265Lfs*18|1|0.28|ENSG00000101350|chr20:32310568-32310568|A/-|frameshift_variant'] 93324 21877 RRSTEHWW True PC9_epitope_Rep6 1156.5526244497198 1156.5515299358601 97.051 2 -1.5379800617262418 0.4129747930167662 1.0 ['ARHGAP27|p.S567Lfs*9|1|0.15|ENSG00000159314|chr17:45402757-45402758|GA/-|frameshift_variant', 'nc|ENSG00000159314|Q6ZUM4-3|ARHGAP27', 'ENSG00000159314|ENST00000685559|ARHGAP27', 'nc|ENSG00000159314|Q6ZUM4-4|ARHGAP27', 'ENST00000531735.5_1_17:43481393-43507645:-|nuORF'] 84011 7413 QENKNLPQAV True H1975_Epitope_Rep2 1139.5934862021898 1139.5923899358602 33.457 2 -1.5380152898025448 0.4129747930167662 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE'] 106775 6871 SYFSNAPV True PC9_epitope_Rep2 883.4075829254699 883.40648993586 31.831 2 -1.5381227722009596 0.4129747930167662 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant', 'DHX34|p.S320C|1|0.28|ENSG00000134815|chr19:47355292-47355292|C/G|missense_variant'] 17960 9048 EIFDIEPK True H1975_Epitope_Rep1 989.50696261357 989.50586993586 39.711 2 -1.5382754547007336 0.4129747930167662 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'nc|ENSG00000006607|O94887-3|FARP2', 'FARP2|p.H590Qfs*52|1|0.12|ENSG00000006607|chr2:241463425-241463426|-/A|frameshift_variant', 'nc|ENSG00000006607|O94887-2|FARP2', 'ENST00000473082.5_1_2:242312627-242344774:+|nuORF'] 40896 13287 HVREQRPR True NCI_RA007_Epitope_Rep3 1076.5951579680398 1076.59406993586 59.533 2 -1.5382839710846838 0.4129747930167662 1.0 ['G3BP2|p.R290H|1|0.64|ENSG00000138757|chr4:75648698-75648698|C/T|missense_variant'] 32563 5103 GGVSSGPG True H1975_Epitope_Rep3 616.28165413636 616.2811049679301 24.74 1 -1.5383142262218177 0.4129747930167662 1.0 ['ENST00000361981.7_1_X:153127328-153128099:-|nuORF'] 66608 5160 LSSPDSRAA True PC9_epitope_Rep5 902.4457593393399 902.44466993586 24.868 2 -1.5383287649439616 0.4129747930167662 1.0 ['ENST00000488216.5_1_X:48434299-48434428:+|nuORF'] 11486 10436 DGEEVLIEW True H1975_Epitope_Rep3 1088.5026055091198 1088.5015099358602 45.201 2 -1.5383688863688347 0.4129747930167662 1.0 ['ENSG00000182489|ENST00000372956|XKRX'] 39816 19560 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 81.166 3 -1.5383962814021053 0.4129747930167662 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 111416 12508 TLKHSRWV True PC9_epitope_Rep6 1025.57704829241 1025.57594993586 59.539 2 -1.5384937555414433 0.41299309295112024 1.0 ['ENST00000544091.1_1_X:78200967-78216108:+|nuORF', 'ENST00000171757.2_1_X:78207807-78216108:+|nuORF'] 11327 9593 DEWLEFFYPQL True NCI_RA007_Epitope_Rep1 1485.6816325002499 1485.68052993586 41.311 2 -1.5387502034031155 0.41308734505621214 1.0 ['ENST00000486607.5_1_3:119198882-119211282:+|nuORF', 'ENSG00000163389|ENST00000295588|POGLUT1', 'ENST00000473648.1_1_3:119209263-119211282:+|nuORF'] 59219 2695 LGGELGSKIP True PC9_epitope_Rep1 969.5494961318899 969.54838993586 14.789 2 -1.5388463330491666 0.41308734505621214 1.0 ['ENSG00000091483|ENST00000366560|FH', 'nc|ENSG00000091483|P07954-2|FH', 'ENST00000497042.1_1_1:241675257-241676920:-|nuORF'] 125196 13224 VLQGSRII True PC9_epitope_Rep6 884.5443511817999 884.54324993586 62.521 2 -1.5389802806387658 0.4130893493375765 1.0 ['ENSG00000186452|ENST00000398458|TMPRSS12'] 107966 5291 TCENSYYQTLV True H1975_Epitope_Rep3 1319.57036779911 1319.5692699358601 25.431 2 -1.5389959387237613 0.4130893493375765 1.0 ['ENSG00000115604|ENST00000233957|IL18R1'] 134054 21931 WQIRQVRALL True PC9_epitope_Rep4 1281.7669743204099 1281.76531490379 92.567 3 -1.539141096591359 0.4131191771976755 1.0 ['nc|ENSG00000126522|P04424-3|ASL', 'nc|ENSG00000126522|P04424-2|ASL', 'ENSG00000126522|ENST00000304874|ASL'] 17004 14719 EGKPSRKRLH True NCI_RA007_Epitope_Rep2 1206.69453765614 1206.6934499358601 61.925 2 -1.5392059665141289 0.4131374742012476 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'nc|ENSG00000048649|Q96T23-3|RSF1'] 129042 6939 VTAGWKGSSL True H1975_Epitope_Rep3 1004.52909504048 1004.52798993586 31.652 2 -1.5393405446576949 0.41315777337084353 1.0 ['SVA_D_dup452|chr5:76811569-76813693:+|1.5063828574396587|0.1174757805189742|3.68|484.0|60|1|anti-sense'] 26313 11598 FIEERRARENR True PC9_epitope_Rep4 1474.7753071579798 1474.7742099358602 52.371 2 -1.5393428276381111 0.41315777337084353 1.0 ['ENST00000415992.5_1_9:139693810-139699267:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-3|CCDC183', 'ENST00000479371.5_1_9:139697227-139701184:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-4|CCDC183', 'ENST00000430612.5_1_9:139694306-139700853:+|nuORF', 'ENST00000371682.7_1_9:139690828-139700853:+|nuORF', 'nc|ENSG00000213213|Q5T5S1-2|CCDC183', 'ENSG00000213213|ENST00000338005|CCDC183'] 3726 7006 AGSPVPTPPRP True H1975_Epitope_Rep2 1074.5821932425 1074.58108993586 31.872 2 -1.539381211995126 0.41315777337084353 1.0 ['nc|ENSG00000126453|Q9HB09-2|BCL2L12'] 46372 20821 ITHVREKAID True PC9_epitope_Rep3 1180.6564208119198 1180.6553299358602 85.359 2 -1.539646957457284 0.41320313130497943 1.0 ['GRIK3|p.T680Pfs*14|1|0.17|ENSG00000163873|chr1:36817113-36817113|T/-|frameshift_variant', 'nc|ENSG00000163873|Q13003-2|GRIK3', 'ENSG00000163873|ENST00000373091|GRIK3'] 32955 12338 GISGKAGC True H1975_Epitope_Rep3 691.33230981023 691.3317649679301 52.641 1 -1.5397626766342083 0.41320313130497943 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|161|3|sense'] 52640 9229 KQEITQNKSFF True H1975_Epitope_Rep3 1368.70376492716 1368.70266993586 40.491 2 -1.5397950111779737 0.41320313130497943 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 121098 18488 VGGAYVGP True PC9_epitope_Rep1 718.3649898374999 718.36444496793 75.905 1 -1.5397990408897073 0.41320313130497943 1.0 ['ENSG00000189221|ENST00000338702|MAOA'] 23030 18491 EVKKKRWNRSK True NCI_RA007_Epitope_Rep1 1457.8579145831297 1457.8568099358602 76.065 2 -1.5398056951102417 0.41320313130497943 1.0 ['ENST00000457507.1_1_1:99473841-99474009:+|nuORF'] 31146 3225 GDDDEDDPD True PC9_epitope_Rep1 991.2890434840699 991.2884949679301 17.286 1 -1.539943509488164 0.4132098964698287 1.0 ['HDAC1|p.E396D|1|0.22|ENSG00000116478|chr1:32331775-32331775|G/C|missense_variant'] 25558 3766 FERYLNFYKQT True PC9_epitope_Rep1 1507.7459640923098 1507.7443049037902 19.401 3 -1.5400396031263908 0.41322819031808067 1.0 ['ENSG00000146857|ENST00000662584|STRA8'] 33747 5803 GLSEEQRQL True NCI_RA007_Epitope_Rep4 1058.5356369729 1058.53452993586 28.946 2 -1.5401864683406457 0.41323495503804475 1.0 ['ENSG00000128928|ENST00000487418|IVD', 'nc|ENSG00000128928|P26440|IVD'] 115775 10764 TVLSTIRFFI True H1975_Epitope_Rep1 1195.69649471875 1195.69538993586 46.365 2 -1.5402728892463968 0.4132620123582034 1.0 ['ENST00000552690.1_1_12:106715380-106717765:+|nuORF'] 70631 13682 MAPTGHST True NCI_RA007_Epitope_Rep5 800.3486881503601 800.34758993586 59.312 2 -1.5402819402506631 0.4132620123582034 1.0 ['ENSG00000130518|ENST00000392413|IQCN', 'nc|ENSG00000130518|Q9H0B3-5|IQCN', 'nc|ENSG00000130518|Q9H0B3|IQCN'] 29032 15521 FTLIEESAK True PC9_epitope_Rep3 1036.54407639828 1036.5429699358601 64.852 2 -1.5402828914661424 0.4132620123582034 1.0 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ABCC4|p.L1261Ffs*59|1|0.26|ENSG00000125257|chr13:95034692-95034693|-/AA|frameshift_variant', 'ENSG00000125257|ENST00000645237|ABCC4', 'nc|ENSG00000125257|O15439-3|ABCC4'] 30719 23893 GALTVLSR True NCI_RA007_Epitope_Rep2 815.4865019525099 815.4859549679301 100.31 1 -1.540331339103077 0.4132620123582034 1.0 ['ENST00000532681.5_1_11:45940000-45940354:-|nuORF'] 20647 6831 EQGQVDDRDQF True H1975_Epitope_Rep1 1335.56912192915 1335.56802993586 31.319 2 -1.5403698396473555 0.41326877629834574 1.0 ['SYNE1|p.E7532Q|2|0.16|ENSG00000131018|chr6:152208202-152208202|C/G|missense_variant'] 69448 8833 LVRRDEIR True H1975_Epitope_Rep1 1055.6199757335498 1055.6188699358602 38.898 2 -1.5404957267812174 0.4132985959006755 1.0 ['nc|ENSG00000164088|Q96MI6-4|PPM1M', 'ENST00000489606.5_1_3:52280576-52282310:+|nuORF', 'ENST00000467471.5_1_3:52279924-52282310:+|nuORF', 'nc|ENSG00000164088|Q96MI6-1|PPM1M', 'nc|ENSG00000164088|Q96MI6-2|PPM1M', 'ENSG00000164088|ENST00000323588|PPM1M'] 48238 21148 KDEDFKQYVNK True H1975_Epitope_Rep1 1412.6935941662798 1412.69248993586 87.854 2 -1.5407171771011077 0.4133467053995481 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 37117 13989 GVSTSSAQ True NCI_RA007_Epitope_Rep4 735.33989728847 735.3393449679301 61.079 1 -1.5407577460158577 0.4133467053995481 1.0 ['ENSG00000163872|ENST00000305135|YEATS2', 'YEATS2-ATP11B|1|fusion'] 47956 9772 KAASLCYLL True NCI_RA007_Epitope_Rep2 980.53648892004 980.5353899358599 42.632 2 -1.5408023324386926 0.4133534680515049 1.0 ['ENSG00000119927|ENST00000348367|GPAM'] 20314 9749 EPEDWVPDP True PC9_epitope_Rep5 1082.4556553167 1082.45454993586 42.47 2 -1.5408708338872865 0.4133554656430473 1.0 ['ENSG00000176248|ENST00000323927|ANAPC2', 'nc|ENSG00000176248|Q9UJX6-2|ANAPC2'] 57637 11811 LELTAC[Carbamidomethyl]EPL True PC9_epitope_Rep5 1044.51614767771 1044.5150499358601 50.427 2 -1.5409306567243908 0.4133554656430473 1.0 ['ENST00000343534.9_1_1:112020844-112021090:+|nuORF'] 39815 18858 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 78.296 3 -1.5413000956389233 0.4133968092954629 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 66912 9901 LSWTVPQGRF True PC9_epitope_Rep1 1189.62439240765 1189.6227449037901 42.942 3 -1.541302372449435 0.4134035710580614 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.R2720Qfs*63|1|0.51|ENSG00000168477|chr6:32061470-32061471|GC/-|frameshift_variant', 'TNXB|p.P3212Lfs*4|1|0.45|ENSG00000168477|chr6:32052891-32052891|G/-|frameshift_variant', 'TNXB|p.T3316Qfs*58|1|0.15|ENSG00000168477|chr6:32050233-32050233|C/-|frameshift_variant', 'TNXB|p.G3470Afs*51|1|0.22|ENSG00000168477|chr6:32049359-32049359|C/-|frameshift_variant'] 71472 24468 MKILLIIFV True NCI_RA007_Epitope_Rep3 1088.70316032232 1088.7020699358602 105.88 2 -1.5414252957778027 0.4134238554105768 1.0 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 103301 14381 SQTSLQKEI True PC9_epitope_Rep3 1032.54513902744 1032.5440499358601 60.409 2 -1.5414808809722247 0.4134238554105768 1.0 ['ENSG00000101966|ENST00000371199|XIAP'] 135306 23529 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 97.818 2 -1.541494723384455 0.4134238554105768 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 111570 4878 TLNASILNSLY True NCI_RA007_Epitope_Rep3 1207.64485306871 1207.64320490379 26.172 3 -1.5416857849037389 0.41346043016205997 1.0 ['ENSG00000082153|ENST00000409600|BZW1', 'nc|ENSG00000082153|Q7L1Q6-4|BZW1', 'nc|ENSG00000082153|Q7L1Q6-3|BZW1', 'nc|ENSG00000082153|Q7L1Q6-2|BZW1'] 28353 21504 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 89.787 2 -1.5416942496254316 0.41346043016205997 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 83254 6580 QADRLFED True PC9_epitope_Rep5 992.4563240230399 992.45522993586 30.28 2 -1.5417629473188252 0.41346719072372895 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 93390 15837 RRWNRDRCK True NCI_RA007_Epitope_Rep2 1288.6683399916399 1288.6672499358601 66.318 2 -1.5418143730611524 0.4134854771784232 1.0 ['ENST00000519067.5_1_8:142220968-142221217:-|nuORF'] 123859 11162 VIYRKVSWS True NCI_RA007_Epitope_Rep3 1136.6342288153598 1136.63257490379 51.012 3 -1.5418978921256614 0.4135009911945046 1.0 ['ENST00000571855.1_1_17:48740997-48741507:+|nuORF'] 100763 19666 SLRPLEAEPP True PC9_epitope_Rep1 1107.59242357303 1107.5913299358601 80.469 2 -1.5419650432571677 0.4135009911945046 1.0 ['ENSG00000161940|ENST00000293805|BCL6B', 'BCL6B|p.S183Vfs*20|1|0.36|ENSG00000161940|chr17:7024539-7024539|C/-|frameshift_variant'] 109492 11331 TGYGQEGK True NCI_RA007_Epitope_Rep2 838.3820964536199 838.38154496793 48.665 1 -1.542027010633095 0.4135009911945046 1.0 ['ENSG00000079112|ENST00000027335|CDH17'] 19510 6223 ELQLEEQK True H1975_Epitope_Rep3 1015.5185899264299 1015.51748993586 28.949 2 -1.5420893337251136 0.4135009911945046 1.0 ['ENSG00000152527|ENST00000282406|PLEKHH2', 'ENST00000405223.6_1_2:43871812-43968195:+|nuORF', 'nc|ENSG00000152527|Q8IVE3-3|PLEKHH2'] 15232 10821 EAGCGNRDQDC True H1975_Epitope_Rep1 1166.40807058462 1166.4069699358602 46.587 2 -1.5423065758968875 0.4135443198451024 1.0 ['ENST00000473905.6_1_1:155026903-155028315:+|nuORF', 'ENST00000472434.5_1_1:155026903-155028315:+|nuORF'] 55623 7560 LCYIITHGDEK True H1975_Epitope_Rep1 1290.6278231055796 1290.62672993586 34.073 2 -1.5423116048159151 0.4135443198451024 1.0 ['ENSG00000106631|ENST00000223364|MYL7'] 29500 25368 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 104.96 3 -1.5423189551971321 0.4135443198451024 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 115018 15817 TTLTSRRTTRI True NCI_RA007_Epitope_Rep1 1304.75244645508 1304.7513499358602 65.623 2 -1.5424289568383711 0.4135578374765181 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A'] 96784 17999 SERCLQKNM True PC9_epitope_Rep1 1107.51649883479 1107.5154099358601 74.027 2 -1.542430807922304 0.4135578374765181 1.0 ['ITGA2|p.N721S|1|0.29|ENSG00000164171|chr5:53070187-53070187|A/G|missense_variant'] 135408 7119 YDQSQPPYYN True H1975_Epitope_Rep3 1273.5251318588498 1273.5240299358602 32.353 2 -1.5424526360880766 0.41355982989708545 1.0 ['nc|ENSG00000182333|P07098-2|LIPF', 'nc|ENSG00000182333|P07098-4|LIPF', 'ENSG00000182333|ENST00000238983|LIPF', 'nc|ENSG00000182333|P07098-3|LIPF'] 37053 14717 GVSEIPSTCT True PC9_epitope_Rep5 992.4484617612801 992.44791496793 61.608 1 -1.5424684191293871 0.41355982989708545 1.0 ['ENST00000506025.1_2_5:176922079-176930550:+|nuORF'] 69578 5611 LVTTSVGL True NCI_RA007_Epitope_Rep3 788.4643695256 788.46326993586 29.064 2 -1.5425017794407923 0.41356381446269086 1.0 ['ENSG00000101115|ENST00000217086|SALL4'] 30257 6537 GAAIASHIGI True PC9_epitope_Rep3 908.50796567308 908.50686993586 30.171 2 -1.5425236636965174 0.41356381446269086 1.0 ['ENST00000560923.5_1_15:58283776-58287296:-|nuORF', 'nc|ENSG00000128918|O94788-4|ALDH1A2', 'nc|ENSG00000128918|O94788-3|ALDH1A2', 'ENSG00000128918|ENST00000249750|ALDH1A2'] 77922 14107 PAIHKSIAI True PC9_epitope_Rep2 948.5756513100799 948.57454993586 59.536 2 -1.542526887545856 0.41356381446269086 1.0 ['ENSG00000068912|ENST00000185150|ERLEC1', 'nc|ENSG00000068912|Q96DZ1-3|ERLEC1'] 4039 7383 AHLHQHQKEQI True NCI_RA007_Epitope_Rep1 1367.70583061583 1367.70418490379 32.712 3 -1.542577224066345 0.41356381446269086 1.0 ['nc|ENSG00000256060|Q8IVP9-2|ZNF547', 'ENSG00000152433|ENST00000282282|ZNF547'] 122930 14789 VGVTVVVA True H1975_Epitope_Rep1 742.4588902223398 742.4583449679301 62.11 1 -1.5426290177355204 0.4135705725085277 1.0 ['ENST00000473093.1_1_3:135915044-135915128:-|nuORF'] 124225 14139 VLARVPKKL True PC9_epitope_Rep5 1022.6964351490999 1022.6953299358601 59.397 2 -1.54265633115068 0.4135725644748669 1.0 ['ENST00000488906.1_1_17:45236559-45237015:-|nuORF'] 9273 12710 AVREDFKDLKP True NCI_RA007_Epitope_Rep4 1316.7088503075997 1316.7077499358602 55.943 2 -1.5426831252608655 0.4135725644748669 1.0 ['ENSG00000179632|ENST00000322428|MAF1'] 106779 7841 SYFSNAPV True PC9_epitope_Rep5 883.4075829254699 883.40648993586 35.104 2 -1.5427652149337288 0.4135793221862432 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant', 'DHX34|p.S320C|1|0.28|ENSG00000134815|chr19:47355292-47355292|C/G|missense_variant'] 58092 12592 LERRTIQDSPH True H1975_Epitope_Rep3 1350.70041088222 1350.6993099358601 53.637 2 -1.5429602717607067 0.413632173311823 1.0 ['ENSG00000006695|ENST00000261643|COX10'] 114675 23348 TSRLQRAL True PC9_epitope_Rep1 943.5563128478299 943.55520993586 94.6 2 -1.5430843668823726 0.4136564231970226 1.0 ['ENST00000266542.8_1_12:7260911-7260965:-|nuORF'] 134302 21836 WRTRSLLKRKT True PC9_epitope_Rep6 1443.8786500277097 1443.87754993586 96.893 2 -1.5431614141935273 0.4136564231970226 1.0 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 29563 25975 FVIFMFFLN True PC9_epitope_Rep5 1176.6041745570399 1176.60253490379 105.45 3 -1.5431619064099587 0.4136564231970226 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 60578 19340 LIRRKREEFIQ True NCI_RA007_Epitope_Rep2 1486.8732302940996 1486.8721299358601 80.131 2 -1.543163360552455 0.4136564231970226 1.0 ['ENSG00000182934|ENST00000332118|SRPRA', 'nc|ENSG00000182934|P08240-2|SRPRA'] 82900 19123 PVYPYPRA True PC9_epitope_Rep5 961.5021520166498 961.50104993586 78.591 2 -1.5431828798698841 0.4136564231970226 1.0 ['ENSG00000175707|ENST00000320567|KDF1'] 52851 7932 KRAEVGVHR True NCI_RA007_Epitope_Rep4 1050.6046600225798 1050.6035699358602 37.253 2 -1.543185111921484 0.4136564231970226 1.0 ['ENST00000578709.5_1_17:37859640-37864671:+|nuORF'] 106387 8173 SVSTSERTL True PC9_epitope_Rep1 978.49818883502 978.49708993586 36.27 2 -1.5433047119313308 0.4136564231970226 1.0 ['ENSG00000038358|ENST00000358933|EDC4', 'ENST00000536072.6_1_16:67909906-67914140:+|nuORF', 'ENST00000572221.5_1_16:67909733-67911757:+|nuORF'] 27268 8908 FLYAFFDPRFR True PC9_epitope_Rep1 1477.7506555499297 1477.7495499358602 39.104 2 -1.5433449349385526 0.4136596156504908 1.0 ['ENSG00000134817|ENST00000606794|APLNR'] 3081 12257 AGAGPWPG True NCI_RA007_Epitope_Rep2 711.33402406239 711.3334749679301 52.277 1 -1.5435171472656588 0.4136596156504908 1.0 ['TBR1|p.G454W|1|0.43|ENSG00000136535|chr2:161423538-161423538|G/T|missense_variant'] 125439 10188 VLTPGTTVT True NCI_RA007_Epitope_Rep4 887.4963979298701 887.4958449679301 46.045 1 -1.5435963835128106 0.4136596156504908 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 29935 26160 FWPANHNPF True PC9_epitope_Rep2 1128.5141136826799 1128.51247490379 106.64 3 -1.5436030501664533 0.4136596156504908 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 109105 6277 TFGGLGSL True PC9_epitope_Rep4 750.39120458534 750.39010993586 31.2 2 -1.5436160725549029 0.4136596156504908 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 129014 19919 VSYTPAMRM True PC9_epitope_Rep3 1054.4939724850599 1054.4928699358602 81.859 2 -1.5437134595893027 0.4136596156504908 1.0 ['ENST00000478590.1_1_15:66206003-66207886:-|nuORF', 'nc|ENSG00000157890|A6BM72-4|MEGF11', 'ENST00000490495.5_1_15:66202139-66208942:-|nuORF', 'nc|ENSG00000157890|A6BM72-2|MEGF11', 'nc|ENSG00000157890|A6BM72|MEGF11', 'ENSG00000157890|ENST00000395614|MEGF11'] 37057 5892 GVSFKLEEK True NCI_RA007_Epitope_Rep4 1035.5600608155898 1035.5589699358602 29.286 2 -1.543793083417261 0.4136596156504908 1.0 ['ENSG00000176422|ENST00000338146|SPRYD4'] 54712 25080 LAEIIYWIRC True PC9_epitope_Rep5 1278.6794647556198 1278.67780490379 101.61 3 -1.5438216315528273 0.4136596156504908 1.0 ['ENSG00000224420|ENST00000420022|ADM5'] 84357 9163 QGAGDLCP True H1975_Epitope_Rep3 759.32213904935 759.3215949679301 40.235 1 -1.5439386365487562 0.4136596156504908 1.0 ['ENSG00000197548|ENST00000693202|ATG7', 'nc|ENSG00000197548|O95352-2|ATG7', 'nc|ENSG00000197548|O95352-3|ATG7'] 121377 20739 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 86.745 2 -1.5439891342931527 0.41366637095752157 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 99050 19623 SKTSGKAK True PC9_epitope_Rep6 805.4657665079299 805.46466993586 88.139 2 -1.5440111973506516 0.4136731261088965 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 32433 11395 GGGTCHRC True H1975_Epitope_Rep3 789.3010267652899 789.3004749679301 48.944 1 -1.5441400024520455 0.413679881104621 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 29921 26083 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 107.96 3 -1.544183511239742 0.41368663594470045 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 27261 9750 FLWMLKDFK True PC9_epitope_Rep4 1226.6521873786198 1226.65054490379 45.141 3 -1.5442519268381756 0.41369339062914023 1.0 ['ENSG00000169402|ENST00000404077|RSPH10B2', 'ENSG00000155026|ENST00000404406|RSPH10B'] 117926 13446 VAQQRYWEWTP True PC9_epitope_Rep1 1462.6993482530597 1462.69824993586 56.579 2 -1.5442874162079236 0.4137116656298242 1.0 ['ENST00000314117.8_1_4:37650968-37687967:-|nuORF'] 64731 22771 LRQRKRGREP True PC9_epitope_Rep4 1294.7694339319 1294.76779490379 95.808 3 -1.5443344958128873 0.4137366941615594 1.0 ['ENST00000460658.5_1_22:31491456-31491618:+|nuORF'] 18179 8781 EIQETLARTKR True NCI_RA007_Epitope_Rep2 1343.7521121019097 1343.75047490379 38.804 3 -1.5443453058113314 0.4137366941615594 1.0 ['NXPH2|p.P93T|1|0.41|ENSG00000144227|chr2:138671440-138671440|G/T|missense_variant'] 28506 5403 FSGLVNGR True PC9_epitope_Rep5 848.45045079696 848.44934993586 25.795 2 -1.5443797234874104 0.41374344795806695 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'FBN2|p.C662Sfs*16|1|0.55|ENSG00000138829|chr5:128374738-128374739|-/G|frameshift_variant'] 36526 21002 GVKMWHLVK True PC9_epitope_Rep6 1096.62155595668 1096.62097496793 93.609 1 -1.5444231917902513 0.4137502015989678 1.0 ['ENSG00000221866|ENST00000321063|PLXNA4', 'nc|ENSG00000221866|Q9HCM2-4|PLXNA4'] 95945 5457 SDYSFSVIAMS True PC9_epitope_Rep1 1205.52744035797 1205.52634993586 25.824 2 -1.5444543869379204 0.41377046158808417 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 55857 15053 LDFGEKRGYL True PC9_epitope_Rep3 1196.6189726740397 1196.6178699358602 63.031 2 -1.544481068264822 0.41377046158808417 1.0 ['ENSG00000144395|ENST00000389175|CCDC150', 'ENST00000471546.5_1_2:197504460-197531652:+|nuORF'] 122581 21401 VGTGAGLLEIK True PC9_epitope_Rep2 1056.61791004488 1056.61737496793 87.791 1 -1.5446047517531045 0.41377046158808417 1.0 ['ENSG00000163468|ENST00000295688|CCT3', 'nc|ENSG00000163468|P49368-2|CCT3'] 99986 11194 SLISKHGTL True PC9_epitope_Rep4 954.5498304850599 954.54872993586 50.836 2 -1.5447075706602813 0.41377721460661215 1.0 ['nc|ENSG00000115355|Q3V6T2-5|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-4|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-2|CCDC88A', 'nc|ENSG00000115355|Q3V6T2-3|CCDC88A', 'ENSG00000115355|ENST00000436346|CCDC88A'] 122170 3013 VGRKNAGH True NCI_RA007_Epitope_Rep2 837.4569331597299 837.45582993586 16.284 2 -1.5447397109279013 0.4137784074547612 1.0 ['ENST00000540801.5_1_17:28030060-28175877:-|nuORF', 'ENST00000579040.5_1_17:28030063-28257182:-|nuORF', 'ENST00000578411.1_1_17:28120861-28257182:-|nuORF'] 86549 26238 QRAPKPLPRV True PC9_epitope_Rep4 1160.71421047156 1160.71310993586 111.25 2 -1.5447743354906796 0.4137784074547612 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 11474 11806 DGASRSSH True H1975_Epitope_Rep2 815.35219330767 815.35164496793 50.488 1 -1.5448564969125143 0.4137784074547612 1.0 ['nc|ENSG00000230246|P0DKV0-2|SPATA31C1', 'nc|ENSG00000230246|P0DKV0|SPATA31C1', 'nc|ENSG00000177910|B4DYI2|SPATA31C2'] 62950 13012 LNDSKWEDIHV True NCI_RA007_Epitope_Rep1 1354.6517293543002 1354.65062993586 54.605 2 -1.5448847232046066 0.4137784074547612 1.0 ['ENST00000493008.1_1_10:32096588-32098081:-|nuORF', 'nc|ENSG00000165322|Q8IWW6-3|ARHGAP12', 'nc|ENSG00000165322|Q8IWW6-2|ARHGAP12', 'nc|ENSG00000165322|Q8IWW6-4|ARHGAP12', 'ENSG00000165322|ENST00000344936|ARHGAP12'] 21186 8184 ERERFESDRDR True NCI_RA007_Epitope_Rep2 1493.6971164069298 1493.69600993586 36.47 2 -1.5449013300404568 0.4137784074547612 1.0 ['ENSG00000065526|ENST00000375759|SPEN'] 94241 19412 RWRLPLTCLLL True NCI_RA007_Epitope_Rep3 1382.82204666838 1382.8204049037902 84.71 3 -1.5449031139570335 0.4137784074547612 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 61341 16934 LLEFACTH True NCI_RA007_Epitope_Rep5 932.4425885352 932.44148993586 71.895 2 -1.544924449991102 0.4137784074547612 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 44198 18932 ILSAILRIPSA True PC9_epitope_Rep6 1152.72304381976 1152.72194993586 85.467 2 -1.545018984960564 0.41380064960493884 1.0 ['ENSG00000221931|ENST00000327930|OR6X1'] 51897 18745 KKRRHLTPT True NCI_RA007_Epitope_Rep4 1135.69380938015 1135.6927099358602 81.096 2 -1.5451071713240636 0.41380064960493884 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 90758 3880 RKRFEIACYRN True NCI_RA007_Epitope_Rep2 1454.7564862896998 1454.7553899358602 19.728 2 -1.5451199086084073 0.41380064960493884 1.0 ['ENST00000437201.5_1_7:72300234-72301326:+|nuORF', 'ENST00000456312.5_1_7:72300234-72300363:+|nuORF', 'ENST00000423945.5_1_7:72300234-72302185:+|nuORF'] 86546 25730 QRAPKPLPRV True PC9_epitope_Rep4 1160.71421047156 1160.71310993586 108.38 2 -1.545125717181601 0.41380064960493884 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 12735 9937 DLGLPEGGAW True PC9_epitope_Rep1 1013.4818104948898 1013.48070993586 43.084 2 -1.5451272651423342 0.41380064960493884 1.0 ['ENST00000456948.5_1_7:26241779-26241902:+|nuORF'] 112268 25336 TLYRLAERVV True PC9_epitope_Rep3 1218.70845638478 1218.70734993586 102.87 2 -1.5452424533435019 0.4138419543208597 1.0 ['VPS50|p.G725R|1|0.3|ENSG00000004766|chr7:93341541-93341541|G/A|missense_variant'] 8922 24001 AVGKVRDVRII True PC9_epitope_Rep1 1224.7666399672398 1224.7660749679299 97.128 1 -1.5452937145435155 0.4138602229798212 1.0 ['nc|ENSG00000100461|Q86U06-4|RBM23', 'nc|ENSG00000100461|Q86U06-2|RBM23', 'nc|ENSG00000100461|Q86U06-3|RBM23', 'ENST00000557667.5_1_14:23373372-23380602:-|nuORF', 'ENSG00000100461|ENST00000359890|RBM23', 'ENST00000556186.5_1_14:23373460-23374730:-|nuORF', 'nc|ENSG00000100461|Q86U06-5|RBM23'] 73092 10455 NDNGNGKN True H1975_Epitope_Rep3 831.34710792723 831.34655496793 45.276 1 -1.545330766074519 0.41387849121796716 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 71209 24509 MFPIILAI True H1975_Epitope_Rep2 916.54559705176 916.54448993586 100.83 2 -1.545381875556689 0.41388524174786356 1.0 ['nc|ENSG00000089057|Q9UGH3-2|SLC23A2', 'ENSG00000089057|ENST00000338244|SLC23A2', 'ENST00000496331.1_1_20:4854564-4866632:-|nuORF', 'ENST00000468355.5_1_20:4850526-4913271:-|nuORF'] 83666 9350 QEAHWVLCEVL True PC9_epitope_Rep2 1325.6438075228898 1325.64270993586 41.302 2 -1.5454709835031486 0.4139035092770682 1.0 ['ENSG00000131910|ENST00000254227|NR0B2'] 110770 25541 TKLKNQKNLL True NCI_RA007_Epitope_Rep1 1198.7397565130598 1198.7386499358602 105.71 2 -1.5455020865629034 0.4139046917106203 1.0 ['ENSG00000118898|ENST00000345988|PPL', 'ENST00000589090.1_1_16:4938789-4940274:-|nuORF'] 24801 24243 FCHLELGS True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 100.66 2 -1.5455506417000582 0.4139046917106203 1.0 ['nc|ENSG00000140022|Q8WXE9|STON2', 'nc|ENSG00000140022|Q8WXE9-3|STON2', 'ENSG00000140022|ENST00000614646|STON2', 'ENST00000555284.1_1_14:81736911-81745120:-|nuORF'] 53185 10341 KSVPLATA True H1975_Epitope_Rep1 785.46470387877 785.4641549679301 44.724 1 -1.5455747008798526 0.4139046917106203 1.0 ['ENSG00000181789|ENST00000314797|COPG1'] 92414 19420 RQRVIRRHR True NCI_RA007_Epitope_Rep3 1275.7860870555498 1275.78445490379 84.74 3 -1.5456014719866904 0.4139046917106203 1.0 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2', 'MYCBP2|p.V1943Lfs*4|1|0.23|ENSG00000005810|chr13:77168602-77168602|T/-|frameshift_variant'] 122514 9178 VGSSPLRPL True H1975_Epitope_Rep2 924.53926580136 924.5387149679301 40.256 1 -1.5456522389786336 0.4139046917106203 1.0 ['ENST00000514191.5_1_14:73404686-73407184:+|nuORF'] 16649 4403 EESRPRARA True NCI_RA007_Epitope_Rep2 1070.5581037529798 1070.5570099358602 21.763 2 -1.54565897472374 0.4139046917106203 1.0 ['nc|ENSG00000160949|Q96HA7-2|TONSL', 'ENSG00000160949|ENST00000409379|TONSL', 'ENST00000497613.2_1_8:145658938-145666334:-|nuORF'] 126698 7220 VPRPGPAP True PC9_epitope_Rep2 789.4497225209699 789.44862993586 33.16 2 -1.5458360160304219 0.4139046917106203 1.0 ['ENSG00000188032|ENST00000548523|C19orf67'] 13937 16938 DRFWDQWYLWY True H1975_Epitope_Rep2 1676.7412130650398 1676.7401099358601 70.397 2 -1.546117473104041 0.4139114412391317 1.0 ['nc|ENSG00000160145|O60229|KALRN', 'nc|ENSG00000160145|O60229-2|KALRN', 'ENST00000488825.5_1_3:123813684-123881061:+|nuORF'] 100413 13728 SLPAAGGW True PC9_epitope_Rep1 757.37588887437 757.37478993586 57.653 2 -1.5461534554558103 0.4139181906121885 1.0 ['ENST00000355977.10_1_1:67390688-67391875:+|nuORF'] 116849 23831 TYMLRVLDD True PC9_epitope_Rep4 1124.55359553616 1124.5524899358602 100.08 2 -1.5462544873333388 0.4139710031438212 1.0 ['CIDEA|p.L191V|1|0.14|ENSG00000176194|chr18:12277181-12277181|C/G|missense_variant', 'ENSG00000176194|ENST00000320477|CIDEA'] 32386 14781 GGGAESGK True NCI_RA007_Epitope_Rep4 661.3031178569299 661.30256496793 64.317 1 -1.546322442204684 0.41397775167553374 1.0 ['nc|ENSG00000233101|C0HLZ6|HOXB-AS3'] 107889 19465 TATLWIAVF True NCI_RA007_Epitope_Rep4 1020.5644179200398 1020.56332993586 84.14 2 -1.546366581733221 0.41398450005182 1.0 ['nc|ENSG00000140090|Q8NFF2-3|SLC24A4', 'ENSG00000140090|ENST00000532405|SLC24A4', 'ENST00000526482.1_1_14:92920194-92959969:+|nuORF', 'nc|ENSG00000140090|Q8NFF2-4|SLC24A4', 'nc|ENSG00000140090|Q8NFF2-2|SLC24A4'] 73087 10748 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 46.37 1 -1.5463921200393536 0.4139912482726854 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 77476 24445 NYPNIFRIS True NCI_RA007_Epitope_Rep1 1122.5821932425 1122.58054490379 101.29 3 -1.54647845819969 0.4139932290827019 1.0 ['CNGA2|p.I487Mfs*21|1|0.55|ENSG00000183862|chrX:151743964-151743964|C/-|frameshift_variant', 'ENSG00000183862|ENST00000329903|CNGA2', 'ENSG00000198515|ENST00000514170|CNGA1'] 121163 9693 VGGIAQIIAA True PC9_epitope_Rep1 911.5440168286299 911.54290993586 42.14 2 -1.5464992932603083 0.4139932290827019 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1', 'ENSG00000171914|ENST00000636159|TLN2'] 115342 10371 TVEDPYLFEL True PC9_epitope_Rep2 1224.5914205135198 1224.5897849037901 45.217 3 -1.5465508080048762 0.41399997696993424 1.0 ['ENSG00000185158|ENST00000543378|LRRC37B', 'nc|ENSG00000185158|Q96QE4-2|LRRC37B', 'nc|ENSG00000185158|Q96QE4|LRRC37B', 'ENST00000580871.5_1_17:30358457-30363256:+|nuORF'] 64705 19303 LRLQLEKLLES True NCI_RA007_Epitope_Rep3 1340.8027506924398 1340.80111490379 84.275 3 -1.5466438966599783 0.4140067247017641 1.0 ['ENSG00000153208|ENST00000295408|MERTK', 'TMEM87B-MERTK|2|fusion', 'TMEM87B-MERTK|3|fusion', 'TMEM87B-MERTK|1|fusion'] 37119 15919 GVSVRRVG True PC9_epitope_Rep3 828.4929843152798 828.49188993586 66.379 2 -1.5467406395368437 0.41402498704588636 1.0 ['ENST00000469804.1_1_3:160282329-160283148:-|nuORF'] 17645 16918 EHQKKVRKM True NCI_RA007_Epitope_Rep4 1182.6655460269797 1182.66391490379 73.306 3 -1.5467870706606177 0.41403173433433893 1.0 ['ENSG00000255150|ENST00000527879|EID3'] 126466 23189 VPLTCRNHM True PC9_epitope_Rep1 1069.51610491197 1069.51500993586 93.991 2 -1.5468511348978686 0.4140337140751658 1.0 ['PRKCZ|p.K182N|1|0.44|ENSG00000067606|chr1:2144335-2144335|G/T|missense_variant'] 64993 16550 LSDFRRRRSFR True H1975_Epitope_Rep3 1494.8280114371798 1494.8269099358602 69.157 2 -1.5469596717084402 0.4140337140751658 1.0 ['ENSG00000171522|ENST00000302472|PTGER4', 'ENST00000513635.1_1_5:40681836-40685490:+|nuORF'] 134866 12981 YAALFTAA True PC9_epitope_Rep3 826.42250471362 826.42140993586 54.959 2 -1.5469907520746495 0.4140356937248129 1.0 ['ENSG00000164199|ENST00000405460|ADGRV1', 'nc|ENSG00000164199|Q8WXG9-2|ADGRV1'] 16451 11214 EELQMTRML True NCI_RA007_Epitope_Rep4 1149.55221563717 1149.55110993586 50.023 2 -1.5469909072005992 0.4140356937248129 1.0 ['ENST00000313755.9_1_22:18900690-18907344:-|nuORF', 'nc|ENSG00000100033|O43272-2|PRODH', 'nc|ENSG00000100033|O43272-1|PRODH', 'ENSG00000100033|ENST00000357068|PRODH', 'ENST00000429300.5_1_22:18905996-18910521:-|nuORF', 'ENST00000609229.1_1_22:18904401-18907344:-|nuORF', 'ENST00000438948.1_1_22:20287467-20300466:+|nuORF'] 137679 12300 YMHDHYLDKYE True H1975_Epitope_Rep2 1512.6343650379997 1512.6332699358602 52.396 2 -1.5469992490987436 0.41404244050154865 1.0 ['ENSG00000131873|ENST00000254190|CHSY1', 'ENSG00000198108|ENST00000305031|CHSY3'] 133611 20992 WIRSTGSSW True PC9_epitope_Rep4 1078.5195929859399 1078.51907496793 88.906 1 -1.5470627032549942 0.41405035747590924 1.0 ['chr12:69359236-69362788|157|12.36|0.22|5.84|+|1|TE_info:HAL1,HAL1_dup16795,L1,LINE,donor,-,69358807,69359236|None,YEATS4|8'] 105188 5093 STNVYGTTLCS True H1975_Epitope_Rep2 1144.50703926656 1144.5059499358601 24.672 2 -1.5470965324842896 0.41405035747590924 1.0 ['ENST00000564893.1_1_16:27692577-27730085:-|nuORF'] 104498 8428 SSPMSGGGP True PC9_epitope_Rep2 775.3170536689099 775.3165049679301 37.788 1 -1.5471344800901612 0.41405035747590924 1.0 ['nc|ENSG00000080503|P51531-2|SMARCA2', 'ENSG00000080503|ENST00000349721|SMARCA2', 'SMARCA2|p.L456Ffs*51|1|0.12|ENSG00000080503|chr9:2058311-2058311|G/-|frameshift_variant'] 69884 19138 LYAWAVEL True PC9_epitope_Rep6 963.5065686907499 963.5060249679301 86.265 1 -1.5471740542183412 0.41405035747590924 1.0 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 108571 14248 TEHGVEVV True H1975_Epitope_Rep2 868.42904664604 868.4279499358599 59.954 2 -1.54721979489304 0.41405035747590924 1.0 ['ENSG00000095370|ENST00000314830|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-6|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-5|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-2|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-3|SH2D3C', 'nc|ENSG00000095370|Q8N5H7-4|SH2D3C'] 44396 15986 INEKTKCPL True PC9_epitope_Rep5 1044.56376629704 1044.5626699358602 66.481 2 -1.5472231877818912 0.41405035747590924 1.0 ['AQP8|p.G183C|1|0.42|ENSG00000103375|chr16:25224521-25224521|G/T|missense_variant'] 29513 25553 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 107.97 3 -1.547255840421945 0.41405035747590924 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 94086 12543 RVWDTRTWDY True H1975_Epitope_Rep3 1396.6523980606398 1396.6513099358601 53.446 2 -1.547288865277507 0.41405035747590924 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 62753 1166 LMACLRIARAH True H1975_Epitope_Rep1 1253.6849015725702 1253.6832449037902 6.1035 3 -1.547362330053993 0.4140562942496978 1.0 ['nc|ENSG00000115970|Q6YHU6-6|THADA', 'nc|ENSG00000115970|Q6YHU6-5|THADA', 'nc|ENSG00000115970|Q6YHU6-3|THADA', 'ENSG00000115970|ENST00000405975|THADA', 'ENST00000408045.7_1_2:43571220-43805671:-|nuORF', 'nc|ENSG00000115970|Q6YHU6-2|THADA'] 91203 22741 RLRENILFHLY True PC9_epitope_Rep2 1472.82521747252 1472.8241299358601 92.968 2 -1.547388132007101 0.4140562942496978 1.0 ['ENSG00000185736|ENST00000381312|ADARB2', 'ENST00000469464.1_1_10:1262889-1279753:-|nuORF'] 61528 4220 LLGDPKKRMRY True PC9_epitope_Rep2 1375.77582475195 1375.77418490379 21.559 3 -1.5473910157145483 0.4140562942496978 1.0 ['ENSG00000177301|ENST00000316361|KCNA2', 'nc|ENSG00000177301|P16389-2|KCNA2'] 19666 9966 ELRWERERERE True PC9_epitope_Rep1 1586.7913511449399 1586.78971490379 43.198 3 -1.5474226482591438 0.4140562942496978 1.0 ['GSE1|p.R339W|1|0.81|ENSG00000131149|chr16:85656368-85656368|C/T|missense_variant'] 69977 14605 LYEQLKRE True PC9_epitope_Rep5 1077.5818588893299 1077.5812749679299 61.18 1 -1.5474445238325794 0.4140562942496978 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 56910 13767 LEDQRFALQ True PC9_epitope_Rep5 1118.5720224816198 1118.57092993586 57.977 2 -1.5474678820894956 0.4140562942496978 1.0 ['TNN|p.R1021L|2|0.25|ENSG00000120332|chr1:175128048-175128048|G/T|missense_variant'] 32430 11254 GGGTCHRC True H1975_Epitope_Rep2 789.3010267652899 789.3004749679301 48.333 1 -1.547543398897716 0.41407293153460106 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 56375 3624 LDRSDEDK True NCI_RA007_Epitope_Rep2 976.4461532621599 976.44504993586 18.748 2 -1.5477562214230383 0.41407293153460106 1.0 ['nc|ENSG00000110321|P78344-2|EIF4G2', 'ENSG00000110321|ENST00000339995|EIF4G2', 'ENST00000532383.5_1_11:10821544-10823273:-|nuORF'] 57263 14286 LEGAPTRMV True PC9_epitope_Rep3 972.50625142092 972.50514993586 60.039 2 -1.547891222934396 0.41407293153460106 1.0 ['nc|ENSG00000100767|O95428-2|PAPLN', 'ENST00000557061.5_1_14:73729237-73739369:+|nuORF'] 63661 9083 LPPFPGAA True NCI_RA007_Epitope_Rep2 768.4170254103599 768.41592993586 39.936 2 -1.5478962246138805 0.41407293153460106 1.0 ['ENSG00000196428|ENST00000688009|TSC22D2', 'nc|ENSG00000196428|O75157|TSC22D2'] 39423 20456 HMEVELPYRYI True PC9_epitope_Rep5 1448.7122214358799 1448.71112993586 83.721 2 -1.5479104636068326 0.41407293153460106 1.0 ['ENSG00000126821|ENST00000247225|SGPP1'] 65609 13353 LSGLPDTVFEI True PC9_epitope_Rep2 1189.6230549949698 1189.6219499358601 56.635 2 -1.5479419780304238 0.41407293153460106 1.0 ['ENSG00000171488|ENST00000370454|LRRC8C'] 10762 24137 CYGGIKKG True PC9_epitope_Rep3 824.4214591678 824.42036993586 98.127 2 -1.5479558306117047 0.41407293153460106 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'ENST00000511489.1_1_5:127701040-127712520:-|nuORF'] 125723 11094 VNENELQQDEP True NCI_RA007_Epitope_Rep1 1313.5735386032497 1313.57244993586 47.152 2 -1.547969455331536 0.41407293153460106 1.0 ['nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B', 'nc|ENSG00000138182|Q96Q89-4|KIF20B'] 63215 7656 LNVVAVGCRA True NCI_RA007_Epitope_Rep2 1000.5487849392399 1000.54768993586 34.405 2 -1.5480093382867632 0.41407293153460106 1.0 ['ENST00000511647.5_1_4:129784042-129784372:+|nuORF'] 127317 23370 VQMWLLLY True H1975_Epitope_Rep2 1064.5728744287599 1064.5717699358602 96.358 2 -1.548081683957757 0.41407293153460106 1.0 ['nc|ENSG00000044090|Q14999-2|CUL7', 'ENSG00000044090|ENST00000265348|CUL7'] 22640 8293 ETRKETAPV True H1975_Epitope_Rep2 1029.5454733806098 1029.54436993586 36.85 2 -1.5480838073996863 0.41407293153460106 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000430598.5_1_15:20613931-20667676:-|nuORF', 'nc|ENSG00000290376|Q9BVR0|HERC2P3', 'ENST00000428453.5_1_15:20588586-20667676:-|nuORF', 'ENST00000529624.5_3_15:28877823-28916776:+|nuORF', 'ENST00000424611.5_1_15:20644728-20658919:-|nuORF'] 115219 20955 TVCDPVLGDK True NCI_RA007_Epitope_Rep5 1045.5113963710098 1045.51028993586 87.611 2 -1.5481670041650943 0.4140923530224207 1.0 ['nc|ENSG00000160209|O00764-2|PDXK'] 23407 20231 EVVHSNNM True NCI_RA007_Epitope_Rep5 928.40726565564 928.40616993586 84.759 2 -1.548209711084388 0.4140923530224207 1.0 ['ENST00000271469.7_2_1:162569461-162569569:+|nuORF'] 84383 13049 QGAVGPEV True PC9_epitope_Rep5 755.38136817763 755.3808149679301 55.197 1 -1.5482493436547373 0.4140923530224207 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 137907 14702 YPPGAILV True NCI_RA007_Epitope_Rep3 828.47454028648 828.47344993586 65.227 2 -1.5483122160909237 0.4140923530224207 1.0 ['ENSG00000163214|ENST00000457308|DHX57'] 124305 11160 VLDLIDAIAP True NCI_RA007_Epitope_Rep2 1038.5961119711399 1038.5950099358602 47.992 2 -1.5483815959286638 0.4140923530224207 1.0 ['ENSG00000120756|ENST00000457734|PLS1'] 40867 5128 HVLTNDDP True H1975_Epitope_Rep1 909.4192102383299 909.41810993586 24.794 2 -1.5485084249973946 0.4140923530224207 1.0 ['PKHD1L1|p.D3548H|1|0.11|ENSG00000205038|chr8:109498504-109498504|G/C|missense_variant'] 37396 23896 GVYLCMEC True H1975_Epitope_Rep3 916.3492823973199 916.34873496793 99.629 1 -1.5485508004450108 0.4140923530224207 1.0 ['ENSG00000196458|ENST00000360187|ZNF605', 'nc|ENSG00000196458|Q86T29-2|ZNF605'] 137834 6039 YPFYYEMCWYV True H1975_Epitope_Rep3 1562.6250462242601 1562.62394993586 28.245 2 -1.548562497241471 0.4140923530224207 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A', 'nc|ENSG00000089094|Q8NHM5-4|KDM2B', 'nc|ENSG00000089094|Q8NHM5-2|KDM2B', 'ENSG00000089094|ENST00000377071|KDM2B', 'ENST00000538503.5_1_12:121882954-121987523:-|nuORF', 'nc|ENSG00000089094|Q8NHM5-5|KDM2B', 'KDM2B|p.I399Mfs*82|1|0.34|ENSG00000089094|chr12:121510014-121510017|GTCT/-|frameshift_variant', 'nc|ENSG00000089094|Q8NHM5-3|KDM2B'] 69976 14704 LYEQLKRE True PC9_epitope_Rep1 1077.5818588893299 1077.5812749679299 61.379 1 -1.548663699584096 0.41414036783831687 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 140256 9849 YWWRFNYRQLY True H1975_Epitope_Rep3 1693.8153810648098 1693.8142899358602 42.914 2 -1.5487051993857075 0.41414036783831687 1.0 ['nc|ENSG00000076356|O75051-2|PLXNA2', 'ENST00000460870.1_1_1:208383501-208390355:-|nuORF'] 137865 23221 YPIHVPAG True NCI_RA007_Epitope_Rep3 852.4493881678 852.44828993586 100.85 2 -1.5488346265595456 0.41414711061493664 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L'] 115190 12753 TVASEKESV True PC9_epitope_Rep2 948.47639076128 948.47528993586 54.359 2 -1.5488723239884779 0.41415385323635023 1.0 ['ENSG00000105281|ENST00000542575|SLC1A5', 'nc|ENSG00000105281|Q15758-3|SLC1A5', 'nc|ENSG00000105281|Q15758-2|SLC1A5'] 120215 19904 VFLWWPGGAG True PC9_epitope_Rep4 1088.5443511817998 1088.54324993586 84.695 2 -1.5489429630054583 0.4142066314493204 1.0 ['nc|ENSG00000187260|Q86TI4-4|WDR86'] 8034 19960 ATDTYILK True PC9_epitope_Rep5 923.4963979298699 923.49530993586 81.83 2 -1.5490475688241094 0.41421766046072767 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 117244 23381 TYWKRLMKLL True PC9_epitope_Rep6 1350.7845985304998 1350.78295490379 103.04 3 -1.5491063470593465 0.41421766046072767 1.0 ['ENST00000482838.1_1_6:32947542-32948492:+|nuORF', 'ENST00000469132.1_1_6:32947542-32947941:+|nuORF'] 97153 7684 SFFPQPQPP True NCI_RA007_Epitope_Rep4 1043.50763131991 1043.50652993586 36.219 2 -1.549112850413411 0.41421766046072767 1.0 ['ENST00000467837.5_1_1:160313501-160313621:+|nuORF'] 16936 9186 EGELNGRR True H1975_Epitope_Rep1 929.4678917662499 929.4673449679301 40.241 1 -1.5491515426329725 0.41421766046072767 1.0 ['ENSG00000147010|ENST00000397821|SH3KBP1', 'nc|ENSG00000147010|Q96B97-2|SH3KBP1', 'nc|ENSG00000147010|Q96B97-3|SH3KBP1', 'ENSG00000198087|ENST00000359314|CD2AP'] 29492 25770 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 105.81 3 -1.5491931485249602 0.41421766046072767 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 133807 5047 WLSAEVRPHGR True H1975_Epitope_Rep3 1306.6894522756998 1306.68781490379 24.535 3 -1.5492574808724826 0.41421766046072767 1.0 ['ENST00000463608.5_1_22:21828989-21829627:-|nuORF', 'ENST00000466772.5_1_22:21063687-21064617:-|nuORF'] 53258 24636 KTGKKGKG True NCI_RA007_Epitope_Rep3 802.5024863698198 802.50138993586 106.55 2 -1.5492726895061697 0.41421766046072767 1.0 ['ENSG00000137077|ENST00000259607|CCL21'] 19167 19399 ELKELLTRELP True PC9_epitope_Rep1 1339.77111621099 1339.7700099358601 79.429 2 -1.5493016261766908 0.41421766046072767 1.0 ['ENST00000468373.1_1_1:153516388-153518231:-|nuORF', 'ENSG00000196154|ENST00000368716|S100A4'] 59766 7661 LGYLLTWKLIL True NCI_RA007_Epitope_Rep2 1331.82169523187 1331.8205899358602 34.426 2 -1.5493856533420507 0.41421766046072767 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 29495 24911 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 103.62 3 -1.54941829969262 0.41421766046072767 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 40307 22631 HRQVDHFFCEV True H1975_Epitope_Rep3 1415.64045347795 1415.63934993586 94.584 2 -1.5494385965160316 0.41421766046072767 1.0 ['OR2J3|p.A258Pfs*34|1|0.6|ENSG00000204701|chr6:29112661-29112661|G/-|frameshift_variant', 'nc|ENSG00000204701|O76001|OR2J3', 'ENSG00000204701|ENST00000641151|OR2J3'] 121767 16118 VGMFLLLL True PC9_epitope_Rep5 904.5455970517598 904.54504496793 66.989 1 -1.5495084522232678 0.41421766046072767 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 111628 10858 TLNRQKYRHVD True H1975_Epitope_Rep3 1428.75859446468 1428.7574899358601 46.847 2 -1.5495396252417095 0.41421766046072767 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 104602 23129 SSTLEKQI True PC9_epitope_Rep5 904.48656152216 904.48546993586 93.953 2 -1.5495508489106242 0.41421766046072767 1.0 ['nc|ENSG00000104885|Q8TEK3-1|DOT1L', 'ENSG00000104885|ENST00000398665|DOT1L', 'ENST00000482433.1_1_19:2216201-2220604:+|nuORF'] 131860 13913 VYDKNMRQLAN True NCI_RA007_Epitope_Rep1 1350.6714192530599 1350.67032993586 58.141 2 -1.549615716376642 0.41421766046072767 1.0 ['ENST00000537821.2_1_1:161482968-161571037:+|nuORF', 'ENST00000507374.5_1_1:161564627-161571037:+|nuORF'] 63464 9530 LPHFESLGKQ True PC9_epitope_Rep4 1154.6084079903399 1154.60730993586 44.27 2 -1.5497039827805859 0.41421766046072767 1.0 ['nc|ENSG00000077254|Q8TEY7|USP33', 'ENST00000528150.1_1_1:78206598-78225465:-|nuORF', 'nc|ENSG00000077254|Q8TEY7-3|USP33'] 111263 6944 TLGRWAPL True NCI_RA007_Epitope_Rep2 912.5181364339599 912.51702993586 31.63 2 -1.5497490259699676 0.41421766046072767 1.0 ['ENST00000525499.1_1_11:111234081-111234617:-|nuORF'] 73088 10851 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 46.767 1 -1.5497923623822183 0.41422440079625344 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 797 5107 ACILLMFSSSS True PC9_epitope_Rep3 1157.54606762757 1157.54443490379 24.73 3 -1.5498891347078316 0.41423937051352844 1.0 ['ENST00000398632.3_1_21:42774955-42775423:+|nuORF'] 37277 23611 GVVMLIHVTV True NCI_RA007_Epitope_Rep1 1066.62088725034 1066.62037496793 97.386 1 -1.549906414900112 0.41423937051352844 1.0 ['ENST00000592447.5_1_18:11886458-11886668:-|nuORF', 'ENST00000589731.5_1_18:11886458-11897263:-|nuORF'] 99885 10024 SLHPWPLQV True PC9_epitope_Rep5 1075.58146496651 1075.58036993586 43.537 2 -1.5499160925976927 0.41423937051352844 1.0 ['ENST00000260599.10_3_2:27309825-27310158:+|nuORF'] 42169 22783 IEFLPFKVV True PC9_epitope_Rep2 1090.64266824074 1090.6415699358602 93.124 2 -1.5499342021790057 0.41423937051352844 1.0 ['ENST00000442006.2_1_1:39174637-39175513:+|nuORF'] 137652 22971 YLYIFPAVLKI True PC9_epitope_Rep4 1338.7951461308596 1338.79351490379 96.577 3 -1.5499941324104765 0.41423937051352844 1.0 ['OR5M8|p.I224V|1|0.31|ENSG00000181371|chr11:56490701-56490701|T/C|missense_variant'] 98138 12266 SICHNGGK True H1975_Epitope_Rep2 814.3755716045399 814.37502496793 52.264 1 -1.5500070238005597 0.41423937051352844 1.0 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5'] 32488 23513 GGLLYLQFLRR True PC9_epitope_Rep2 1334.7822900313797 1334.78065490379 95.915 3 -1.5500243029065852 0.41423937051352844 1.0 ['ENST00000491710.5_3_6:12015770-12015848:+|nuORF'] 45631 6234 ISHKHNVP True PC9_epitope_Rep2 930.50354899898 930.50244993586 29.376 2 -1.5502079585143678 0.41423937051352844 1.0 ['ENSG00000100109|ENST00000407690|TFIP11'] 130993 16698 VVLATKTP True NCI_RA007_Epitope_Rep5 827.51165407119 827.51054993586 70.994 2 -1.550309411152923 0.41423937051352844 1.0 ['ENSG00000090402|ENST00000264382|SI', 'SI|p.P1140Lfs*44|1|0.11|ENSG00000090402|chr3:165019606-165019606|G/-|frameshift_variant'] 116084 6430 TVSEVSSRGP True PC9_epitope_Rep2 1017.50908787189 1017.50798993586 30.142 2 -1.5503113456636193 0.41423937051352844 1.0 ['ENST00000518198.1_1_8:142138729-142146690:+|nuORF'] 37072 4604 GVSHNITFESP True H1975_Epitope_Rep3 1186.56185172074 1186.56019490379 22.832 3 -1.5503286747227594 0.41423937051352844 1.0 ['SOS2|p.P1259*|1|0.09|ENSG00000100485|chr14:50118556-50118569|GAGGAGTGCTTGGC/-|frameshift_variant', 'ENSG00000100485|ENST00000216373|SOS2', 'nc|ENSG00000100485|Q07890-2|SOS2'] 122386 14285 VGSGAQGA True NCI_RA007_Epitope_Rep3 645.30820323737 645.30765496793 63.514 1 -1.5503593126207706 0.41423937051352844 1.0 ['nc|ENSG00000139625|Q12852|MAP3K12', 'ENSG00000139625|ENST00000547488|MAP3K12', 'ENST00000547020.1_1_12:53880221-53880452:-|nuORF'] 20515 21288 EPVTLKLSP True PC9_epitope_Rep1 982.5698972232999 982.56880993586 86.71 2 -1.5504000239100584 0.41423937051352844 1.0 ['ENSG00000184908|ENST00000375679|CLCNKB', 'nc|ENSG00000184908|P51801-2|CLCNKB'] 6665 11358 AQAKVQKMNL True PC9_epitope_Rep4 1129.62776353593 1129.62610490379 51.463 3 -1.550405209636115 0.41423937051352844 1.0 ['ENST00000549041.1_1_12:51634351-51634513:+|nuORF'] 55211 9731 LAPPSPWPFL True PC9_epitope_Rep5 1123.60661708519 1123.6055299358602 42.399 2 -1.550447251339012 0.41423937051352844 1.0 ['ENST00000221452.12_1_19:45541072-45541210:+|nuORF'] 45063 12016 IQQIYEWHRDY True H1975_Epitope_Rep1 1549.73137665733 1549.7302699358602 51.227 2 -1.5504962677299399 0.41423937051352844 1.0 ['nc|ENSG00000240771|Q86VW2-2|ARHGEF25', 'ENSG00000240771|ENST00000286494|ARHGEF25', 'nc|ENSG00000240771|Q86VW2-3|ARHGEF25'] 12764 14867 DLHHSDRYQV True PC9_epitope_Rep5 1268.58979780408 1268.5881449037902 62.188 3 -1.5505578481346196 0.41423937051352844 1.0 ['ENST00000496262.1_1_1:45079940-45092094:+|nuORF'] 48862 9214 KESQVDELNIW True H1975_Epitope_Rep3 1359.6670450652698 1359.66594993586 40.434 2 -1.5505617608490136 0.41423937051352844 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 66135 14905 LSPDGDAN True NCI_RA007_Epitope_Rep5 787.33481190803 787.33426496793 64.0 1 -1.5505925366998732 0.41423937051352844 1.0 ['ENST00000542400.5_1_12:125432350-125435235:-|nuORF'] 27485 11499 FPATGSSY True H1975_Epitope_Rep2 828.3653837603199 828.36483496793 49.288 1 -1.5505996543664577 0.41423937051352844 1.0 ['ENST00000320241.4_1_16:86613413-86613659:+|nuORF'] 115722 10483 TVLGSDRI True PC9_epitope_Rep1 859.47633119163 859.4752299358599 45.211 2 -1.550604524149725 0.41423937051352844 1.0 ['ENST00000437205.5_1_3:183639090-183689734:-|nuORF', 'nc|ENSG00000114770|O15440-5|ABCC5', 'ENSG00000114770|ENST00000334444|ABCC5', 'NAALADL2-ABCC5|1|fusion'] 96070 10060 SECKGKQYVK True PC9_epitope_Rep4 1168.5910436740398 1168.58938490379 46.364 3 -1.5507625084469547 0.41429212345707417 1.0 ['ENSG00000154175|ENST00000471714|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0-4|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0|ABI3BP', 'ENST00000497021.1_1_3:100471523-100484734:-|nuORF', 'nc|ENSG00000154175|Q7Z7G0-2|ABI3BP', 'nc|ENSG00000154175|Q7Z7G0-3|ABI3BP', 'ENST00000470336.5_1_3:100469341-100565327:-|nuORF'] 134822 15481 WYQVGLDLQPW True H1975_Epitope_Rep3 1403.6873865870298 1403.68628993586 64.965 2 -1.5508144212112123 0.4143103646612217 1.0 ['ENSG00000183396|ENST00000330862|TMEM89'] 91463 3012 RNRLMRDMAQ True PC9_epitope_Rep1 1289.6444933125701 1289.6428349037901 16.326 3 -1.5509125797025693 0.41435834905443336 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 37806 24544 HDALYVVG True H1975_Epitope_Rep3 872.43921740692 872.43812993586 102.14 2 -1.5509624716248671 0.41435834905443336 1.0 ['ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'ENST00000478105.5_1_21:47981571-47987532:+|nuORF'] 56332 13872 LDRFHPRRYRH True NCI_RA007_Epitope_Rep1 1551.8283457903499 1551.8272499358602 57.98 2 -1.5510302935003253 0.4143650857556969 1.0 ['ENSG00000054690|ENST00000329153|PLEKHH1', 'ENST00000561370.5_1_14:68048786-68054020:+|nuORF'] 125373 5563 VLSSIETGV True PC9_epitope_Rep1 903.49131254943 903.49020993586 26.228 2 -1.5510653261450325 0.4143718223019762 1.0 ['nc|ENSG00000104067|Q07157-2|TJP1', 'nc|ENSG00000104067|Q07157|TJP1', 'ENSG00000104067|ENST00000614355|TJP1'] 79321 15371 PGKPGKRLV True H1975_Epitope_Rep3 950.6025347642599 950.60142993586 64.534 2 -1.5511327176364067 0.41440156438718584 1.0 ['ENST00000392754.7_2_10:126431146-126431500:-|nuORF'] 53343 13517 KTQWWHWWAPM True H1975_Epitope_Rep3 1555.7183098758298 1555.7172099358602 57.272 2 -1.5511818466578127 0.41440550270879584 1.0 ['ENST00000318443.9_1_15:73976775-73994724:+|nuORF'] 113190 22127 TQDNPPVF True NCI_RA007_Epitope_Rep4 916.4290466460399 916.4279499358599 95.963 2 -1.5511891402338505 0.41440550270879584 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4'] 36023 7832 GVDHQVISDS True PC9_epitope_Rep5 1055.4883524273098 1055.48724993586 35.069 2 -1.5511982901741708 0.41440550270879584 1.0 ['nc|ENSG00000075856|Q15020-4|SART3'] 109129 6362 TFKATNKK True NCI_RA007_Epitope_Rep2 936.5392658013599 936.53816993586 29.352 2 -1.5512013870656105 0.41440550270879584 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 126472 2618 VPLVDGESDP True PC9_epitope_Rep2 1026.48695544498 1026.4858499358602 14.726 2 -1.5512715418635565 0.414423740510697 1.0 ['nc|ENSG00000169946|Q8WW38-2|ZFPM2', 'ENSG00000169946|ENST00000407775|ZFPM2'] 76025 24587 NRKFPRRRR True NCI_RA007_Epitope_Rep5 1284.7751880186797 1284.77408993586 102.05 2 -1.5513954483059027 0.4144304758399374 1.0 ['ENST00000287934.3_1_7:90894005-90894200:+|nuORF'] 82195 10537 PTGDPQYLT True NCI_RA007_Epitope_Rep4 990.4658260775801 990.4652749679301 47.377 1 -1.5517155172046493 0.4144717167767017 1.0 ['ENSG00000105364|ENST00000253099|MRPL4', 'nc|ENSG00000105364|Q9BYD3-2|MRPL4'] 95832 20023 SDIIILPHI True PC9_epitope_Rep2 1019.60153170475 1019.60042993586 82.423 2 -1.5517782775298314 0.41449668752300334 1.0 ['ENSG00000148842|ENST00000369878|CNNM2', 'nc|ENSG00000148842|Q9H8M5-2|CNNM2', 'nc|ENSG00000148842|Q9H8M5-3|CNNM2'] 111309 21281 TLHQKDLDC True PC9_epitope_Rep5 1071.5018943164698 1071.5007899358602 86.91 2 -1.5518199014055611 0.41449668752300334 1.0 ['ENSG00000102189|ENST00000322349|EEA1'] 16363 11294 EELDFQKN True H1975_Epitope_Rep2 1021.4716397340101 1021.47054993586 48.489 2 -1.5518924412302002 0.41450062106086394 1.0 ['nc|ENSG00000160789|P02545-2|LMNA', 'nc|ENSG00000160789|P02545-6|LMNA', 'nc|ENSG00000160789|P02545-3|LMNA', 'ENSG00000160789|ENST00000368300|LMNA', 'nc|ENSG00000160789|P02545-5|LMNA', 'nc|ENSG00000160789|P02545-4|LMNA'] 57653 17067 LELWVNYYVRW True PC9_epitope_Rep1 1539.7874349814701 1539.78632993586 70.473 2 -1.5520076834694838 0.41450062106086394 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 13618 7221 DPSSVGVA True NCI_RA007_Epitope_Rep5 730.3497336961799 730.34918496793 34.453 1 -1.5520403874345465 0.41450062106086394 1.0 ['ENSG00000153914|ENST00000334121|SREK1', 'ENST00000380918.7_1_5:65440973-65454737:+|nuORF', 'ENST00000520058.1_1_5:65440204-65449453:+|nuORF'] 83352 6831 QAPTDQRGV True PC9_epitope_Rep6 970.4832074772199 970.48210993586 35.139 2 -1.552064403244175 0.41450062106086394 1.0 ['ENST00000587494.1_1_19:10959184-10970726:+|nuORF', 'ENSG00000214212|ENST00000397820|C19orf38'] 41391 13329 IAQEAQYKDL True H1975_Epitope_Rep3 1177.59790287629 1177.5968099358602 56.53 2 -1.5520776455122267 0.4145188558810337 1.0 ['ENSG00000151838|ENST00000537690|CCDC175'] 98558 5052 SILTAVADEEP True H1975_Epitope_Rep3 1143.56593404167 1143.5648299358602 24.555 2 -1.5521409808175213 0.4145295213561193 1.0 ['ENST00000581133.5_1_17:26906381-26907081:-|nuORF', 'ENSG00000076382|ENST00000321765|SPAG5'] 55928 9738 LDGWAFGWWLV True H1975_Epitope_Rep3 1348.6604435631998 1348.65934993586 42.48 2 -1.5521905385973798 0.4145295213561193 1.0 ['ENST00000591996.1_1_17:76416381-76416633:+|nuORF'] 52990 24602 KRQYHVQF True NCI_RA007_Epitope_Rep1 1104.58286194884 1104.5817699358602 101.9 2 -1.5522031575550936 0.4145295213561193 1.0 ['ENST00000312173.5_1_11:46164605-46165142:+|nuORF'] 82297 26396 PTPPDELLPQA True PC9_epitope_Rep2 1176.60265390356 1176.60100490379 107.86 3 -1.5522139024667936 0.4145295213561193 1.0 ['nc|ENSG00000007171|P35228-2|NOS2', 'chr17:27789688-27793588|304|24.82|0.71|5.12|-|ENST00000646938|NOS2,NOS2', 'ENSG00000007171|ENST00000313735|NOS2'] 30739 11437 GANRGLRLW True PC9_epitope_Rep1 1041.5831963020098 1041.58208993586 48.87 2 -1.5522173179521668 0.4145295213561193 1.0 ['ENST00000259523.10_1_8:128748561-128748855:+|nuORF'] 62050 17296 LLLWTPLPM True H1975_Epitope_Rep3 1082.61982462118 1082.6192749679299 72.179 1 -1.5522554912878788 0.41454298725792355 1.0 ['ENSG00000198888|ENST00000361390|MT-ND1'] 114188 13140 TRTQKEEL True PC9_epitope_Rep3 1003.5298233164699 1003.52872993586 55.571 2 -1.552334406122474 0.41454298725792355 1.0 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF'] 21410 5941 ERNHWHYRDLE True H1975_Epitope_Rep1 1553.71237254825 1553.7112699358602 27.923 2 -1.5523938850207126 0.41457271985004085 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 22872 10786 EVERVRRSERY True H1975_Epitope_Rep3 1477.7749728048097 1477.7738699358601 46.568 2 -1.5525461192639685 0.41457945214931347 1.0 ['ENSG00000122678|ENST00000242248|POLM', 'nc|ENSG00000122678|Q9NP87-2|POLM', 'ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 48073 3264 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 16.578 3 -1.5526694582948313 0.4146091836382663 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 125497 6558 VLVMFGIV True H1975_Epitope_Rep3 876.5142969234798 876.5131899358599 30.184 2 -1.5529488308590518 0.4146840683033404 1.0 ['ENSG00000116329|ENST00000234961|OPRD1'] 10544 24655 CPQRRKKPRL True NCI_RA007_Epitope_Rep1 1280.7611777473198 1280.7600899358602 102.1 2 -1.5529589399861472 0.4146840683033404 1.0 ['ENST00000526269.2_1_11:128561788-128562594:-|nuORF'] 90644 24830 RKKPLLSSH True NCI_RA007_Epitope_Rep5 1064.6454622054 1064.64487496793 103.0 1 -1.5530005026281384 0.4146840683033404 1.0 ['ENST00000552187.1_1_12:48358077-48358221:+|nuORF', 'ENST00000429772.6_1_12:48357429-48359073:+|nuORF'] 71755 25435 MMRKKLQVVV True PC9_epitope_Rep2 1230.7304547826598 1230.72934993586 103.52 2 -1.5530689483027096 0.4146840683033404 1.0 ['ENST00000264331.8_2_3:25678746-25679682:-|nuORF'] 62446 20022 LLSHQEFWAQL True PC9_epitope_Rep5 1370.6982856239 1370.69718993586 82.066 2 -1.5530814939745754 0.4146840683033404 1.0 ['ENSG00000187037|ENST00000334425|GPR141'] 13612 21555 DPSLTIKSI True PC9_epitope_Rep2 972.54916177872 972.54806993586 88.38 2 -1.5530826639454103 0.4146840683033404 1.0 ['ENSG00000198712|ENST00000361739|MT-CO2'] 3817 6020 AGVQQQPL True NCI_RA007_Epitope_Rep3 839.4501164437899 839.44900993586 30.659 2 -1.5530958926553549 0.4146907987029414 1.0 ['ENSG00000172732|ENST00000308110|MUS81', 'ENST00000530928.5_1_11:65630557-65632047:+|nuORF'] 133704 12009 WLEPLLARIKH True NCI_RA007_Epitope_Rep2 1374.8135901596597 1374.8119349037902 51.303 3 -1.5531314419844238 0.41470902756217876 1.0 ['ENSG00000141429|ENST00000269195|GALNT1'] 33617 11906 GLLRAPFRCYH True PC9_epitope_Rep2 1331.69209512799 1331.6909899358602 51.121 2 -1.5532339108978181 0.41471575752000733 1.0 ['ENST00000506919.1_1_4:146560261-146567442:+|nuORF', 'ENSG00000151611|ENST00000649156|MMAA'] 74954 19476 NLVAAFEQSL True PC9_epitope_Rep5 1090.56587447202 1090.56476993586 79.967 2 -1.5532723274837181 0.4147177187535932 1.0 ['nc|ENSG00000134369|Q8NEY1-6|NAV1', 'nc|ENSG00000134369|Q8NEY1-7|NAV1', 'nc|ENSG00000134369|Q8NEY1-4|NAV1', 'nc|ENSG00000134369|Q8NEY1-2|NAV1', 'nc|ENSG00000134369|Q8NEY1-3|NAV1', 'nc|ENSG00000134369|Q8NEY1|NAV1', 'ENSG00000134369|ENST00000685211|NAV1', 'ENST00000469130.5_1_1:201751782-201763782:+|nuORF', 'nc|ENSG00000134369|Q8NEY1-5|NAV1', 'ENST00000477118.2_3_1:201762910-201763243:+|nuORF'] 38953 5282 HISDFSFLMV True PC9_epitope_Rep5 1194.5743309807401 1194.57268490379 25.333 3 -1.5533413503203692 0.4147177187535932 1.0 ['ENSG00000126583|ENST00000263431|PRKCG', 'nc|ENSG00000126583|P05129-2|PRKCG', 'PRKCG|p.H456Qfs*26|1|0.23|ENSG00000126583|chr19:53900319-53900319|T/-|frameshift_variant'] 78522 19918 PDKVKKKY True NCI_RA007_Epitope_Rep5 1004.6018660579198 1004.60076993586 83.528 2 -1.5535375507120652 0.41472444837934486 1.0 ['nc|ENSG00000158402|P30307-4|CDC25C', 'nc|ENSG00000158402|P30307-3|CDC25C', 'nc|ENSG00000158402|P30307-2|CDC25C', 'ENSG00000158402|ENST00000323760|CDC25C'] 86708 22971 QRIHLLLE True H1975_Epitope_Rep2 1020.6080140675199 1020.60690993586 94.807 2 -1.5535735386254568 0.4147255627859919 1.0 ['ENSG00000171487|ENST00000390649|NLRP5', 'NLRP5|p.R518Pfs*11|1|0.24|ENSG00000171487|chr19:56027786-56027786|G/-|frameshift_variant', 'NLRP5|p.F494Sfs*35|1|0.39|ENSG00000171487|chr19:56027708-56027708|C/-|frameshift_variant'] 120897 4790 VGDYWRNF True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 23.52 2 -1.553602837555867 0.4147255627859919 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant'] 39812 16553 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 68.896 3 -1.5537719952819378 0.4147255627859919 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 112281 18733 TLYTLLHFPLQ True PC9_epitope_Rep6 1344.74417318716 1344.7430699358601 84.697 2 -1.5538300027881253 0.4147255627859919 1.0 ['ENST00000398922.6_1_11:62433120-62433833:+|nuORF', 'ENST00000529868.1_1_11:62433120-62433501:+|nuORF'] 55204 6197 LAPPASTK True H1975_Epitope_Rep3 783.44905381463 783.44794993586 28.85 2 -1.5538355191873912 0.4147255627859919 1.0 ['ENST00000400068.7_2_20:1918826-1919048:+|nuORF'] 61172 15699 LLDLARTSLQ True PC9_epitope_Rep2 1128.65027280232 1128.64861490379 65.662 3 -1.5538586349443386 0.4147255627859919 1.0 ['CCT6B|p.V151L|1|0.59|ENSG00000132141|chr17:34954485-34954485|C/A|missense_variant'] 57655 14975 LELWVNYYVRW True PC9_epitope_Rep6 1539.7874349814701 1539.78632993586 69.612 2 -1.553894685773863 0.4147255627859919 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 22602 6343 ETPQTVPA True PC9_epitope_Rep5 841.4181476091699 841.4175949679301 29.373 1 -1.5539011599500068 0.41472752356863646 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 91211 19518 RLRLRKERVSD True NCI_RA007_Epitope_Rep3 1426.84807817542 1426.84642490379 85.154 3 -1.5539035614204353 0.41472752356863646 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 124007 25715 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.54726993586 106.46 2 -1.5540611458169804 0.41474574907163636 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 62285 20929 LLQNKRITYEK True NCI_RA007_Epitope_Rep2 1404.8088987020399 1404.80725490379 86.562 3 -1.5541192842940077 0.41475247752408545 1.0 ['ENST00000337147.11_1_6:159187137-159187215:-|nuORF'] 78249 3345 PAQYCHAV True PC9_epitope_Rep6 887.3959726959499 887.39486993586 18.979 2 -1.5542228006109304 0.41475443759771913 1.0 ['nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP'] 117390 11204 VADATAIKQHV True NCI_RA007_Epitope_Rep1 1151.62987171091 1151.6287699358602 47.58 2 -1.5542873210238122 0.41475443759771913 1.0 ['nc|ENSG00000172421|Q8N7B9-2|EFCAB3', 'ENSG00000172421|ENST00000305286|EFCAB3'] 140904 14944 YYVGKKNI True NCI_RA007_Epitope_Rep4 983.54401682863 983.54290993586 64.947 2 -1.554522579947814 0.4147785403087676 1.0 ['ENSG00000167653|ENST00000301258|PSCA'] 128816 13811 VSRTIFHNK True PC9_epitope_Rep3 1100.60907669668 1100.6079699358602 58.202 2 -1.5545268636335945 0.4147785403087676 1.0 ['ANKS1B|p.K676N|1|0.39|ENSG00000185046|chr12:99246593-99246593|T/A|missense_variant'] 29556 26797 FVIFMFFLN True PC9_epitope_Rep3 1176.6041745570399 1176.60253490379 109.9 3 -1.5545410570294174 0.4147785403087676 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 73089 10943 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 47.125 1 -1.5545464544663758 0.4147785403087676 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 79375 16531 PGLAYSNRETI True PC9_epitope_Rep2 1219.61970095003 1219.6186099358601 68.826 2 -1.5545571358555865 0.4147785403087676 1.0 ['CEACAM8|p.P93L|1|0.47|ENSG00000124469|chr19:42593687-42593687|G/A|missense_variant'] 66018 14022 LSMHRPGA True H1975_Epitope_Rep1 867.43850621427 867.4379549679301 59.098 1 -1.5545581071627073 0.4147785403087676 1.0 ['ENST00000571914.1_1_17:79604394-79604607:+|nuORF'] 90276 19744 RHRRRRKQR True H1975_Epitope_Rep1 1347.8296832030298 1347.82804490379 82.176 3 -1.5546096643133536 0.4147785403087676 1.0 ['ENSG00000004975|ENST00000005340|DVL2', 'ENST00000572285.5_1_17:7132813-7133230:-|nuORF', 'ENST00000574642.5_1_17:7132550-7133686:-|nuORF'] 122656 5458 VGTPPSPQ True PC9_epitope_Rep6 781.39701824177 781.39592993586 28.928 2 -1.5547020603664374 0.41479199475819895 1.0 ['nc|ENSG00000235927|Q8NBZ9|NEXN-AS1'] 62194 24897 LLPPALKIGLK True PC9_epitope_Rep2 1161.7849158003298 1161.78328490379 101.43 3 -1.5547283710350437 0.41479199475819895 1.0 ['ENST00000269919.10_1_19:18475054-18475243:+|nuORF'] 118544 7241 VDVLKATA True PC9_epitope_Rep3 815.47526856247 815.47416993586 32.862 2 -1.5550578906188215 0.4147978712398993 1.0 ['ENSG00000120158|ENST00000381750|RCL1'] 122061 13771 VGRAAPRWR True NCI_RA007_Epitope_Rep2 1067.6100797561899 1067.60898993586 58.214 2 -1.555065291998895 0.4147978712398993 1.0 ['ENST00000372583.5_1_1:42050979-42094538:-|nuORF'] 55504 17004 LAVRSRSK True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56084496793 72.168 1 -1.5550682506032492 0.4147978712398993 1.0 ['ENST00000262207.8_1_8:75896754-75896892:+|nuORF'] 121136 10113 VGGGGHHL True NCI_RA007_Epitope_Rep3 732.3667211730001 732.3661749679301 46.871 1 -1.5550822348596367 0.4147978712398993 1.0 ['ENSG00000213023|ENST00000600079|SYT3'] 36174 5612 GVFIIERET True PC9_epitope_Rep5 1062.57095985246 1062.5698699358602 26.589 2 -1.5550868390161519 0.4147978712398993 1.0 ['ENSG00000039068|ENST00000261769|CDH1', 'ENST00000562836.5_1_16:68797408-68867399:+|nuORF', 'nc|ENSG00000039068|P12830-2|CDH1', 'ENST00000567320.1_1_16:68842461-68842763:+|nuORF'] 22487 6949 ETIARCWYIL True H1975_Epitope_Rep3 1266.6430792468998 1266.64198993586 31.691 2 -1.5550943388393692 0.4147978712398993 1.0 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-2|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-6|RAPGEF6'] 53164 13133 KSRKKSSP True NCI_RA007_Epitope_Rep4 916.5454138109599 916.54430993586 57.615 2 -1.555153953785751 0.4148045977011494 1.0 ['ENSG00000050030|ENST00000055682|NEXMIF'] 58754 14535 LFLNLNHRF True PC9_epitope_Rep3 1172.6454622054 1172.6438249037901 61.029 3 -1.5552173884003806 0.4148228181285273 1.0 ['ENST00000265748.6_2_7:36429459-36435956:+|nuORF'] 130882 11975 VVGWPKGM True NCI_RA007_Epitope_Rep3 872.4578446765199 872.45674993586 54.225 2 -1.5554047314768875 0.4148870140916301 1.0 ['ENST00000430974.6_1_6:133562627-133562813:+|nuORF'] 71680 20366 MLVQPGMN True PC9_epitope_Rep6 888.41974491564 888.41864993586 91.035 2 -1.555628741232649 0.4149052331528798 1.0 ['ENSG00000108349|ENST00000264645|CASC3'] 118505 7458 VDSPPSGGGW True H1975_Epitope_Rep3 957.4192102383299 957.41810993586 33.665 2 -1.5556428787606744 0.41492345179531975 1.0 ['ENSG00000197712|ENST00000358869|FAM114A1'] 18402 4450 EKDYCWEYFL True NCI_RA007_Epitope_Rep2 1394.5852895872597 1394.5841899358602 21.943 2 -1.5558476279405697 0.41495988782382826 1.0 ['DHX36|p.R854Kfs*19|1|0.2|ENSG00000174953|chr3:154280585-154280586|-/T|frameshift_variant', 'nc|ENSG00000174953|Q9H2U1-3|DHX36', 'nc|ENSG00000174953|Q9H2U1-2|DHX36', 'ENSG00000174953|ENST00000496811|DHX36'] 82474 6708 PVDVDKDS True NCI_RA007_Epitope_Rep5 873.40797684829 873.40686993586 32.474 2 -1.5558538383328746 0.41495988782382826 1.0 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 80885 14270 PLWPLRLSF True PC9_epitope_Rep6 1127.64915060351 1127.6480499358602 66.781 2 -1.555899826890193 0.4149666118818026 1.0 ['ENST00000291295.13_1_19:47113260-47113362:+|nuORF'] 136035 5273 YFRGYEWWFMK True NCI_RA007_Epitope_Rep2 1611.7332912336294 1611.73218993586 25.132 2 -1.5560631584559776 0.4149696607520456 1.0 ['GALC|p.L133F|2|0.09|ENSG00000054983|chr14:87986532-87986532|C/A|missense_variant'] 52887 22846 KRFVGSLG True H1975_Epitope_Rep2 862.5024863698198 862.50138993586 94.322 2 -1.556064329886646 0.4149696607520456 1.0 ['ENSG00000104643|ENST00000221086|MTMR9'] 137714 9377 YMVMECGNIDL True H1975_Epitope_Rep2 1286.5345169676998 1286.5334099358602 41.031 2 -1.5560685866804482 0.4149696607520456 1.0 ['nc|ENSG00000112742|P33981-2|TTK', 'ENSG00000112742|ENST00000369798|TTK', 'TTK|p.A401Ffs*17|1|0.11|ENSG00000112742|chr6:80022416-80022416|G/TT|frameshift_variant'] 90358 3717 RIILKIPI True PC9_epitope_Rep2 964.6797224558 964.67862993586 19.565 2 -1.55612285726142 0.4149696607520456 1.0 ['ENST00000260746.5_1_10:104449690-104459203:-|nuORF'] 85674 7926 QLQRDALRHFA True NCI_RA007_Epitope_Rep1 1353.72656606041 1353.72546993586 34.823 2 -1.556130233037481 0.4149696607520456 1.0 ['ENSG00000235194|ENST00000452015|PPP1R3E'] 94543 7546 RYIMTYHEK True PC9_epitope_Rep2 1239.6070280913498 1239.6053849037899 34.391 3 -1.5561417303332463 0.4149696607520456 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6'] 94542 7546 RYIMTYHEK True PC9_epitope_Rep2 1239.6070280913498 1239.6053849037899 34.391 3 -1.5561417303332463 0.4149696607520456 1.0 ['nc|ENSG00000119121|Q9BX84-4|TRPM6', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6'] 124101 20936 VKTKGGSK True H1975_Epitope_Rep2 803.4865019525099 803.48540993586 86.676 2 -1.5561498462344634 0.4149696607520456 1.0 ['ENSG00000100365|ENST00000248899|NCF4', 'nc|ENSG00000100365|Q15080-3|NCF4'] 63623 8372 LPMEQARYLEP True H1975_Epitope_Rep3 1345.6700222707295 1345.6689299358602 37.186 2 -1.55615337287046 0.4149696607520456 1.0 ['EPS8L3|p.N273Tfs*33|1|0.15|ENSG00000198758|chr1:109757958-109757958|T/-|frameshift_variant', 'nc|ENSG00000198758|Q8TE67-2|EPS8L3', 'ENSG00000198758|ENST00000361965|EPS8L3', 'nc|ENSG00000198758|Q8TE67-3|EPS8L3'] 52285 21328 KPAATWPP True NCI_RA007_Epitope_Rep4 866.46503823194 866.46394993586 92.452 2 -1.5562385685769031 0.41497638392498015 1.0 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 55613 11549 LCTHRGGA True NCI_RA007_Epitope_Rep1 813.3915560218499 813.39044993586 48.892 2 -1.5562961465319294 0.41497833806410095 1.0 ['ENST00000369303.8_1_6:94124469-94129072:-|nuORF'] 125241 14637 VLQVSLQRV True NCI_RA007_Epitope_Rep5 1040.6342288153598 1040.63312993586 62.969 2 -1.5563043427931136 0.41497833806410095 1.0 ['ENSG00000112249|ENST00000369162|ASCC3'] 60489 16522 LIMQEMLM True NCI_RA007_Epitope_Rep3 1007.4853819473099 1007.48428993586 72.786 2 -1.5563287855433638 0.41498029211339793 1.0 ['ENST00000397641.7_1_22:31352760-31354648:-|nuORF'] 3016 3161 AFRKKKKLV True PC9_epitope_Rep6 1116.74953335112 1116.74842993586 18.108 2 -1.5563736624306204 0.41498029211339793 1.0 ['ENST00000601728.1_1_19:23309373-23309649:-|nuORF'] 29541 26556 FVIFMFFLN True PC9_epitope_Rep1 1176.6041745570399 1176.60253490379 107.84 3 -1.5565826582036446 0.41501671971777576 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 94460 8420 RYFWQPSP True H1975_Epitope_Rep3 1079.5188647099499 1079.51776993586 37.371 2 -1.5565982581211093 0.41501671971777576 1.0 ['nc|ENSG00000164796|Q7Z407-3|CSMD3', 'nc|ENSG00000164796|Q7Z407-4|CSMD3', 'nc|ENSG00000164796|Q7Z407-2|CSMD3', 'ENSG00000164796|ENST00000297405|CSMD3', 'nc|ENSG00000164796|Q7Z407-5|CSMD3', 'CSMD3|p.S3015Lfs*14|2|0.38|ENSG00000164796|chr8:112289471-112289471|C/-|frameshift_variant', 'CSMD3|p.V3191Lfs*17|1|0.3|ENSG00000164796|chr8:112265528-112265528|C/-|frameshift_variant', 'CSMD3|p.H3450Qfs*4|1|0.18|ENSG00000164796|chr8:112244445-112244446|TA/-|frameshift_variant', 'CSMD3|p.N3536Kfs*11|1|0.15|ENSG00000164796|chr8:112237209-112237210|-/T|frameshift_variant', 'CSMD3|p.H2195Mfs*41|2|0.67|ENSG00000164796|chr8:112341546-112341546|G/-|frameshift_variant', 'CSMD3|p.E2409Kfs*7|1|0.45|ENSG00000164796|chr8:112319922-112319922|C/-|frameshift_variant'] 3292 6301 AGGIGDAKE True PC9_epitope_Rep3 816.39774651776 816.39664993586 29.268 2 -1.5567422062877507 0.415020625782803 1.0 ['nc|ENSG00000100206|Q14565-2|DMC1', 'ENSG00000100206|ENST00000216024|DMC1'] 111627 10767 TLNRQKYRHVD True H1975_Epitope_Rep3 1428.75859446468 1428.7574899358601 46.496 2 -1.55678909556453 0.415020625782803 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 25773 6397 FFSGRQVW True H1975_Epitope_Rep3 1025.5083000262498 1025.5072099358601 29.583 2 -1.5568615036040405 0.415020625782803 1.0 ['ENSG00000100985|ENST00000372330|MMP9'] 15083 5182 EACCKFLMK True PC9_epitope_Rep1 1071.49152995691 1071.4904299358602 24.784 2 -1.5568711113192064 0.415020625782803 1.0 ['nc|ENSG00000109790|Q96PQ7-5|KLHL5', 'nc|ENSG00000109790|Q96PQ7-4|KLHL5', 'ENSG00000109790|ENST00000504108|KLHL5', 'nc|ENSG00000109790|Q96PQ7|KLHL5', 'nc|ENSG00000109790|Q96PQ7-2|KLHL5', 'nc|ENSG00000109790|Q96PQ7-3|KLHL5'] 77840 11222 PAGAPGTPGP True PC9_epitope_Rep2 820.40791727864 820.40682993586 48.494 2 -1.5571532211963388 0.41505032862986624 1.0 ['ENSG00000108821|ENST00000225964|COL1A1'] 90991 17627 RLKAGHGG True NCI_RA007_Epitope_Rep5 794.4511195032999 794.45002993586 74.584 2 -1.5572080776167179 0.4150522808227048 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 97 5066 AAAQGVKR True PC9_epitope_Rep6 799.46643521427 799.46532993586 27.133 2 -1.5572285107813846 0.4150522808227048 1.0 ['ENST00000392161.3_1_19:36900716-36909439:-|nuORF'] 79702 25230 PHPAAIAL True PC9_epitope_Rep3 788.45447354824 788.4539249679301 102.43 1 -1.5573831087447405 0.41505900196481715 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 90357 3616 RIILKIPI True PC9_epitope_Rep2 964.6797224558 964.67862993586 19.184 2 -1.5575033235850817 0.41507352941176473 1.0 ['ENST00000260746.5_1_10:104449690-104459203:-|nuORF'] 90577 21968 RKHQKRKRHLE True PC9_epitope_Rep6 1514.90184508378 1514.90020490379 97.419 3 -1.5576611910293474 0.41507352941176473 1.0 ['ENSG00000166432|ENST00000651725|ZMAT1', 'nc|ENSG00000166432|Q5H9K5-2|ZMAT1', 'nc|ENSG00000166432|Q5H9K5|ZMAT1'] 10528 10928 CPMLQNLA True NCI_RA007_Epitope_Rep4 888.41974491564 888.41864993586 48.895 2 -1.5576893717721794 0.41507352941176473 1.0 ['ENST00000218789.9_3_13:111957024-111957249:+|nuORF'] 45612 8965 ISGVPSAVSL True PC9_epitope_Rep1 928.5229470308799 928.52184993586 39.329 2 -1.5577742223507032 0.41507352941176473 1.0 ['ENST00000305123.5_1_2:227662067-227662256:-|nuORF'] 73085 10550 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 45.6 1 -1.557833293898061 0.41507352941176473 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 37438 25100 GWRRRRLQA True PC9_epitope_Rep1 1197.69554071565 1197.6938849037901 101.43 3 -1.5578726304270434 0.41507352941176473 1.0 ['ENST00000281243.9_1_4:17510922-17513691:-|nuORF'] 37478 16008 GYDFQYYVE True NCI_RA007_Epitope_Rep5 1182.48695544498 1182.4852949037902 68.301 3 -1.5579457746011325 0.41507352941176473 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|100|1|anti-sense'] 133067 2694 VYYDISTAK True PC9_epitope_Rep1 1058.5284263341398 1058.52732993586 14.787 2 -1.557971047219558 0.41507352941176473 1.0 ['ENSG00000134318|ENST00000315872|ROCK2'] 3121 12605 AGDEAPMS True H1975_Epitope_Rep1 776.3010692516 776.3005249679301 53.535 1 -1.5580984305847787 0.41507352941176473 1.0 ['ENSG00000130307|ENST00000252597|USHBP1'] 66110 8103 LSNSLAIA True PC9_epitope_Rep1 787.44396843419 787.44286993586 35.994 2 -1.5581760756073284 0.41509173837616753 1.0 ['nc|ENSG00000122420|P43088-5|PTGFR', 'nc|ENSG00000122420|P43088-6|PTGFR', 'nc|ENSG00000122420|P43088-7|PTGFR', 'nc|ENSG00000122420|P43088-3|PTGFR', 'nc|ENSG00000122420|P43088-4|PTGFR', 'nc|ENSG00000122420|P43088-2|PTGFR', 'ENSG00000122420|ENST00000370757|PTGFR'] 71858 23307 MPGLNFFRDV True NCI_RA007_Epitope_Rep5 1194.58556437078 1194.58390490379 96.935 3 -1.5581897667140117 0.4150984582155741 1.0 ['ENST00000403963.5_1_7:14249142-14880939:-|nuORF', 'ENSG00000136267|ENST00000402815|DGKB', 'nc|ENSG00000136267|Q9Y6T7-2|DGKB', 'nc|ENSG00000136267|Q9Y6T7|DGKB'] 80078 17151 PKGPCGRK True H1975_Epitope_Rep1 841.4592416588499 841.45869496793 71.42 1 -1.5582415024629954 0.4151023596718976 1.0 ['ENST00000593717.1_17:7517322-7517418:+|nuORF'] 117648 8694 VAILRDAEFYE True H1975_Epitope_Rep3 1324.66631678928 1324.6646849037902 38.441 3 -1.5583284781935054 0.4151023596718976 1.0 ['nc|ENSG00000198682|O95340|PAPSS2', 'ENSG00000198682|ENST00000456849|PAPSS2'] 105668 21811 SVFYCKKI True PC9_epitope_Rep4 986.5259242363398 986.52482993586 92.092 2 -1.558332437611303 0.4151023596718976 1.0 ['ENSG00000127366|ENST00000247883|TAS2R5'] 73657 15981 NGLKSLSA True NCI_RA007_Epitope_Rep1 788.43921740692 788.43812993586 66.265 2 -1.5583460997536471 0.4151023596718976 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 63243 14118 LPAEDWIVANK True H1975_Epitope_Rep3 1254.66083748602 1254.66027496793 59.634 1 -1.5584595177335072 0.4151205670499845 1.0 ['nc|ENSG00000196091|Q00872|MYBPC1', 'nc|ENSG00000196091|Q00872-6|MYBPC1'] 268 20596 AAGPYHHH True PC9_epitope_Rep6 888.3990839304402 888.39798993586 91.951 2 -1.558527203804881 0.415127286095028 1.0 ['ENSG00000106031|ENST00000649031|HOXA13'] 49113 5263 KGDTVAWHML True NCI_RA007_Epitope_Rep1 1156.56991430664 1156.5688099358601 24.555 2 -1.5586614740206592 0.4151340049856977 1.0 ['HEPH|p.L646M|1|0.32|ENSG00000089472|chrX:66200611-66200611|C/A|missense_variant'] 130065 20595 VTQGPLPP True PC9_epitope_Rep3 807.4490538146299 807.44794993586 84.487 2 -1.55868895229704 0.41515221137277425 1.0 ['ENSG00000086570|ENST00000261800|FAT2'] 90748 20305 RKQRRSREKL True NCI_RA007_Epitope_Rep5 1355.8221977807495 1355.82055490379 85.043 3 -1.558714753893514 0.4151541607315168 1.0 ['ENST00000511056.1_1_5:180480165-180482232:+|nuORF', 'ENST00000511589.1_1_5:180479790-180480560:+|nuORF', 'ENST00000509395.1_1_5:180480078-180480560:+|nuORF', 'nc|ENSG00000165810|Q6UXG8-2|BTNL9', 'nc|ENSG00000165810|Q6UXG8-3|BTNL9', 'ENSG00000165810|ENST00000327705|BTNL9'] 100462 11679 SLPGTPAAW True PC9_epitope_Rep1 898.4548674710599 898.45376993586 49.8 2 -1.5587248243226444 0.4151541607315168 1.0 ['ENST00000265316.7_1_2:220083495-220083603:-|nuORF'] 15488 8882 EAQERSFQEYM True H1975_Epitope_Rep1 1416.5979795292797 1416.5968899358602 39.076 2 -1.5587592642105665 0.41516087900474424 1.0 ['ENSG00000162654|ENST00000355754|GBP4'] 73046 17166 NDKKILFRYSV True PC9_epitope_Rep3 1381.77178491733 1381.7706899358602 71.187 2 -1.5588288139304325 0.4151790842465596 1.0 ['ENSG00000118492|ENST00000397944|ADGB', 'nc|ENSG00000118492|Q8N7X0-2|ADGB'] 48642 18766 KEKIREERRNK True NCI_RA007_Epitope_Rep5 1484.8535574786795 1484.8524699358602 79.016 2 -1.5588498035735092 0.41518775055423457 1.0 ['ENSG00000206530|ENST00000393845|CFAP44', 'nc|ENSG00000206530|Q96MT7-1|CFAP44'] 32440 12164 GGHGFPGP True H1975_Epitope_Rep2 724.3292730351199 724.32872496793 51.874 1 -1.5588506125817114 0.41518775055423457 1.0 ['nc|ENSG00000126456|Q14653-4|IRF3'] 68933 26360 LVFRKPRGLFI True PC9_epitope_Rep1 1344.8394109846797 1344.83776490379 106.9 3 -1.5588688767143621 0.41518775055423457 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 48858 21351 KESKDILI True PC9_epitope_Rep2 944.5542471591599 944.55314993586 87.594 2 -1.5589680165283653 0.4151944680557789 1.0 ['ENSG00000180043|ENST00000424985|GARIN5B'] 34038 23889 GNPHKTSA True H1975_Epitope_Rep1 810.3984152241001 810.39730993586 99.157 2 -1.5590123523939037 0.41520118540300255 1.0 ['nc|ENSG00000158023|Q8TBY9-2|CFAP251', 'ENSG00000158023|ENST00000288912|CFAP251', 'ENST00000545752.1_1_12:122399919-122407612:+|nuORF'] 10131 21013 CARAPDGAG True H1975_Epitope_Rep2 816.3548361599599 816.35372993586 86.979 2 -1.559061927214233 0.41523087525844243 1.0 ['ENST00000575058.1_1_17:79660710-79662246:+|nuORF'] 52286 22241 KPAATWPP True NCI_RA007_Epitope_Rep5 866.46503823194 866.46394993586 92.697 2 -1.55938749549916 0.4152616345844627 1.0 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 119557 9793 VERFRYGW True PC9_epitope_Rep2 1111.5563128478298 1111.5552099358601 43.007 2 -1.559465422554847 0.4152616345844627 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1', 'nc|ENSG00000167525|Q8NCQ7-3|PROCA1'] 137576 17716 YLSPNQLSR True PC9_epitope_Rep1 1076.56145779792 1076.56036993586 72.94 2 -1.5594817620873753 0.4152616345844627 1.0 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'ENST00000509742.1_1_6:166826252-166837415:-|nuORF'] 64463 7131 LQTKLANPH True NCI_RA007_Epitope_Rep4 1020.5716285587998 1020.57052993586 34.048 2 -1.5595292298179437 0.4152616345844627 1.0 ['DNAH9|p.H3554Q|1|0.21|ENSG00000007174|chr17:11881269-11881269|C/A|missense_variant'] 85434 5014 QLEVDPSNGKK True NCI_RA007_Epitope_Rep2 1213.63026563373 1213.62916993586 24.126 2 -1.5595609064885045 0.4152616345844627 1.0 ['ENSG00000135355|ENST00000369352|GJA10'] 35904 9716 GVAHGCTR True NCI_RA007_Epitope_Rep2 799.3759059577101 799.37480993586 42.412 2 -1.559619275773629 0.4152616345844627 1.0 ['ENSG00000128683|ENST00000358196|GAD1', 'nc|ENSG00000128683|Q99259-3|GAD1', 'nc|ENSG00000128683|Q99259-4|GAD1'] 42925 15580 IFWLWWRACWF True PC9_epitope_Rep5 1612.7801818563996 1612.7785349037902 64.938 3 -1.559630431339036 0.4152616345844627 1.0 ['ENSG00000268104|ENST00000598581|SLC6A14'] 8286 5937 ATKSDPHSV True PC9_epitope_Rep6 940.4614094034799 940.46030993586 31.128 2 -1.5596371597710104 0.4152616345844627 1.0 ['ENST00000325333.9_1_19:56154335-56154581:+|nuORF'] 123582 14371 VIKCRNEI True PC9_epitope_Rep1 973.5378859023699 973.53678993586 60.103 2 -1.5597165400502409 0.41526835038877213 1.0 ['nc|nan|Q8TB03-2|CXorf38', 'ENSG00000185753|ENST00000327877|CXorf38'] 24637 15168 FASCMGDS True NCI_RA007_Epitope_Rep4 816.27822563204 816.27712993586 65.936 2 -1.5598320275142843 0.4152865510508786 1.0 ['ENSG00000116679|ENST00000367498|IVNS1ABP', 'ENST00000459929.5_1_1:185275751-185278625:-|nuORF'] 75224 9887 NPIFWEEVS True H1975_Epitope_Rep3 1119.5236753068698 1119.52317496793 43.061 1 -1.5598622955017611 0.41529326641476494 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 6041 16737 APLSTPLAP True PC9_epitope_Rep2 865.4909186266099 865.49037496793 69.626 1 -1.5599158007775584 0.4152999816244028 1.0 ['ENST00000308018.8_1_19:39423336-39423570:+|nuORF'] 90067 7266 RGLHAITDREK True NCI_RA007_Epitope_Rep3 1294.7105816430997 1294.7094899358601 35.69 2 -1.559995546203118 0.4153181812961538 1.0 ['ENSG00000179941|ENST00000650064|BBS10', 'BBS10|p.T263Pfs*15|1|0.29|ENSG00000179941|chr12:76347198-76347198|T/-|frameshift_variant'] 56052 6029 LDKYYYALYEM True H1975_Epitope_Rep1 1470.67410459166 1470.6730099358601 28.262 2 -1.5600293326797914 0.4153201263278783 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4', 'nc|ENSG00000091128|A4D0S4-2|LAMB4', 'LAMB4|p.D826Tfs*7|1|0.23|ENSG00000091128|chr7:108066571-108066571|C/-|frameshift_variant', 'ENST00000475469.1_1_7:107703197-107763609:-|nuORF'] 48861 9054 KESQVDELNIW True H1975_Epitope_Rep1 1359.6670450652698 1359.66594993586 39.735 2 -1.5600480074434964 0.4153201263278783 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 102104 9627 SPQEVLSPA True PC9_epitope_Rep2 926.4709114580198 926.46980993586 42.371 2 -1.5601589044469806 0.4153383251412559 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 72151 20618 MRGGGQVG True NCI_RA007_Epitope_Rep4 760.3650069208398 760.36390993586 89.305 2 -1.5603367358504416 0.41537472151404486 1.0 ['ENST00000567999.5_1_16:90015111-90020668:+|nuORF'] 19199 23877 ELKNRRKKKKQ True H1975_Epitope_Rep2 1454.9157638124195 1454.91412490379 98.353 3 -1.5603447642541612 0.41537472151404486 1.0 ['nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'SCN2A|p.H645Qfs*36|1|0.12|ENSG00000136531|chr2:165323419-165323419|T/-|frameshift_variant'] 76989 9746 NVSLTVTNMPP True NCI_RA007_Epitope_Rep2 1171.59070932087 1171.5896099358602 42.531 2 -1.5604331716406792 0.415392919073485 1.0 ['nc|ENSG00000164078|Q04912-5|MST1R', 'nc|ENSG00000164078|Q04912-2|MST1R', 'ENSG00000164078|ENST00000296474|MST1R', 'nc|ENSG00000164078|Q04912-7|MST1R'] 3098 20629 AGAMKLIND True PC9_epitope_Rep2 931.47970231991 931.47860993586 84.783 2 -1.5606225701258492 0.41542454238533794 1.0 ['SERPINA5|p.Q171L|1|0.18|ENSG00000188488|chr14:94587874-94587874|A/T|missense_variant'] 104507 18527 SSPVYHFV True PC9_epitope_Rep1 934.45486747106 934.45376993586 76.052 2 -1.5606354886720524 0.41542454238533794 1.0 ['ENST00000336156.9_1_22:45592445-45593009:-|nuORF'] 86547 25873 QRAPKPLPRV True PC9_epitope_Rep4 1160.71421047156 1160.71310993586 109.2 2 -1.5606367043415559 0.41542454238533794 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 93925 17378 RVKPQQGT True NCI_RA007_Epitope_Rep5 912.51411368268 912.5130099358599 73.625 2 -1.5606961300336237 0.4154331974507665 1.0 ['ENSG00000178467|ENST00000383729|P4HTM', 'nc|ENSG00000178467|Q9NXG6-3|P4HTM', 'ENST00000484115.5_1_3:49043466-49044337:+|nuORF', 'ENST00000472301.5_1_3:49043105-49044337:+|nuORF'] 72168 22779 MRLRHKEKNQ True PC9_epitope_Rep4 1338.7302715418598 1338.72916993586 95.84 2 -1.5607025773283187 0.4154331974507665 1.0 ['nc|ENSG00000168843|Q8N475-3|FSTL5', 'nc|ENSG00000168843|Q8N475-2|FSTL5'] 114187 12970 TRTQKEEL True PC9_epitope_Rep3 1003.5298233164699 1003.52872993586 54.915 2 -1.5607507843321968 0.4154331974507665 1.0 ['ENST00000472073.1_1_22:19121711-19131632:-|nuORF'] 96739 5889 SEQIPRVP True H1975_Epitope_Rep2 924.5028802926399 924.50178993586 27.638 2 -1.5607963094260975 0.41545139287600763 1.0 ['ENST00000425217.5_2_12:118105298-118293285:-|nuORF'] 52221 8153 KMWHWKTVT True PC9_epitope_Rep5 1215.62228423267 1215.62118993586 36.3 2 -1.5609717243965073 0.41546481719639905 1.0 ['ENST00000594919.1_1_19:52839677-52851056:+|nuORF'] 20295 25029 EPAPHRRY True PC9_epitope_Rep1 1024.52026169228 1024.5191699358602 101.2 2 -1.5610081559718045 0.41546481719639905 1.0 ['ENST00000483559.5_1_9:139835382-139837095:-|nuORF'] 7416 6704 ASATGVYLA True H1975_Epitope_Rep3 851.4388830537499 851.43778993586 30.741 2 -1.5612094201867723 0.415483011631779 1.0 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 27371 22108 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 92.168 2 -1.5613517760767064 0.4155079170063497 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 117928 13498 VAQQRYWEWTP True PC9_epitope_Rep3 1462.6993482530597 1462.69824993586 56.972 2 -1.5613528074763594 0.4155079170063497 1.0 ['ENST00000314117.8_1_4:37650968-37687967:-|nuORF'] 99074 20013 SLAATPFP True H1975_Epitope_Rep1 802.4225047136199 802.4219549679301 83.287 1 -1.5615163988352163 0.41555578519513625 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 52007 23642 KLEKPRKPITF True PC9_epitope_Rep1 1355.8289058706298 1355.82727490379 95.728 3 -1.5615305167098872 0.41555578519513625 1.0 ['ENSG00000127804|ENST00000263092|METTL16'] 81615 5528 PRPTQFSCV True H1975_Epitope_Rep2 1033.5015003936498 1033.50040993586 26.271 2 -1.5616224626370543 0.4155739775415069 1.0 ['ENSG00000241945|ENST00000291576|PWP2', 'ENST00000471490.1_1_21:45539071-45541135:+|nuORF'] 66296 14279 LSQHRKIHVEK True NCI_RA007_Epitope_Rep2 1373.7891663169696 1373.7880699358602 60.204 2 -1.5620044447262647 0.41561617414066265 1.0 ['ENSG00000180938|ENST00000319286|ZNF572'] 23120 10938 EVLYFPDRWWH True H1975_Epitope_Rep1 1546.7357337617798 1546.73462993586 47.037 2 -1.5620375167117682 0.41561617414066265 1.0 ['nc|ENSG00000161999|Q96S16-2|JMJD8', 'ENSG00000161999|ENST00000609261|JMJD8', 'ENST00000569441.5_1_16:732796-733478:-|nuORF'] 36149 7510 GVFASRSSL True NCI_RA007_Epitope_Rep3 922.4872302285 922.48612993586 36.666 2 -1.5620790909956765 0.41561617414066265 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000563874.5_2_16:28488839-28493793:-|nuORF', 'nc|ENSG00000261832|Q13286-6|CLN3', 'nc|ENSG00000261832|Q13286-2|CLN3', 'ENST00000561689.6_2_16:28488839-28493686:-|nuORF', 'nc|ENSG00000261832|Q13286-5|CLN3', 'ENST00000565140.5_3_16:28489128-28499933:-|nuORF'] 19405 22760 ELPFLTHVN True PC9_epitope_Rep2 1068.5603951687601 1068.55928993586 93.039 2 -1.5621051880110168 0.41561617414066265 1.0 ['ENSG00000178971|ENST00000651323|CTC1'] 23499 10892 EWDNDFEDI True H1975_Epitope_Rep2 1181.4512982122499 1181.4502099358601 46.925 2 -1.562132282062271 0.41561617414066265 1.0 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 115641 8115 TVITPDPNL True NCI_RA007_Epitope_Rep2 968.51786165044 968.51676993586 36.198 2 -1.5622032340669323 0.41561617414066265 1.0 ['ENSG00000181222|ENST00000674977|POLR2A', 'nc|ENSG00000181222|P24928|POLR2A', 'nc|ENSG00000181222|P24928-2|POLR2A'] 46308 16546 ITERQSFIRRF True H1975_Epitope_Rep1 1451.7997310006697 1451.7986299358602 69.018 2 -1.5622242347053428 0.41561617414066265 1.0 ['nc|ENSG00000183605|Q6P4A7-2|SFXN4', 'ENSG00000183605|ENST00000355697|SFXN4', 'ENST00000461438.5_1_10:120917240-120925159:-|nuORF'] 60877 18628 LKQENGILR True NCI_RA007_Epitope_Rep2 1069.6243924076498 1069.6232899358602 77.258 2 -1.5622318794765702 0.41561617414066265 1.0 ['ENSG00000126777|ENST00000395314|KTN1', 'nc|ENSG00000126777|Q86UP2-2|KTN1', 'nc|ENSG00000126777|Q86UP2-3|KTN1', 'nc|ENSG00000126777|Q86UP2-4|KTN1'] 28615 554 FSRFPEDMMM True PC9_epitope_Rep2 1289.5242866371698 1289.52265490379 3.1327 3 -1.5622796668182708 0.41562288325316005 1.0 ['nc|ENSG00000140287|P19113-2|HDC', 'ENSG00000140287|ENST00000267845|HDC', 'ENST00000559816.1_1_15:50534459-50545113:-|nuORF'] 74522 7239 NKVAITVP True PC9_epitope_Rep1 840.50690304392 840.50580993586 32.658 2 -1.5624265310058814 0.4156363010160152 1.0 ['nc|ENSG00000165458|O15357-2|INPPL1', 'ENSG00000165458|ENST00000298229|INPPL1', 'INPPL1|p.S980Nfs*4|2|0.11|ENSG00000165458|chr11:72237183-72237183|G/AT|frameshift_variant'] 128960 15953 VSVNTWTP True PC9_epitope_Rep1 902.44978209062 902.44868993586 66.173 2 -1.5624267302979267 0.4156363010160152 1.0 ['ENST00000244051.2_1_20:49576777-49576906:+|nuORF'] 33520 10200 GLHQSHGRQKS True PC9_epitope_Rep2 1233.6326656755698 1233.6315699358602 44.571 2 -1.5625168599838548 0.41563823802909067 1.0 ['ENST00000320623.9_1_16:69752155-69760649:-|nuORF'] 78547 16645 PDNADMWG True NCI_RA007_Epitope_Rep5 904.33851738948 904.33742993586 70.791 2 -1.5625220835247489 0.41563823802909067 1.0 ['ENST00000517917.5_1_8:42128977-42177019:+|nuORF', 'ENST00000520201.5_1_8:42128977-42147678:+|nuORF', 'ENST00000517812.5_1_8:42129241-42147678:+|nuORF', 'ENST00000342222.6_1_8:42128977-42146162:+|nuORF', 'ENST00000518679.5_1_8:42129623-42171892:+|nuORF', 'ENST00000519733.5_1_8:42128977-42166452:+|nuORF'] 138131 16644 YQKYPVKY True PC9_epitope_Rep6 1087.5702315764697 1087.56912993586 76.487 2 -1.562616409725343 0.41564494650319145 1.0 ['ITLN1|p.G195V|1|0.12|ENSG00000179914|chr1:160880689-160880689|C/A|missense_variant', 'ENSG00000179914|ENST00000326245|ITLN1', 'nc|ENSG00000158764|Q8WWU7-2|ITLN2', 'ENSG00000158764|ENST00000368029|ITLN2'] 45942 5052 ISSEQHGI True PC9_epitope_Rep2 869.42429561877 869.42318993586 24.803 2 -1.5626318022731889 0.4156516548232674 1.0 ['ENST00000450443.1_1_2:173368840-173377133:-|nuORF'] 86979 12621 QRVQLWEHFQS True H1975_Epitope_Rep3 1456.7211463267997 1456.72004993586 53.751 2 -1.562731052515392 0.41565836298932385 1.0 ['nc|ENSG00000289758|Q92902-4|HPS1', 'ENSG00000107521|ENST00000361490|HPS1', 'nc|ENSG00000289758|Q92902-3|HPS1', 'nc|ENSG00000289758|Q92902-2|HPS1', 'ENST00000498219.5_1_10:100189376-100195420:-|nuORF', 'ENST00000470095.5_1_10:100185440-100193832:-|nuORF', 'ENST00000467246.5_1_10:100191016-100205113:-|nuORF'] 22497 13965 ETIQVHRRYWR True H1975_Epitope_Rep1 1542.81677804714 1542.81568993586 58.874 2 -1.5627719384565684 0.41566029938470017 1.0 ['nc|ENSG00000094631|Q9UBN7-2|HDAC6', 'ENSG00000094631|ENST00000334136|HDAC6'] 100933 6696 SLSPGGPGP True PC9_epitope_Rep1 767.38136817763 767.38026993586 30.559 2 -1.5627886737708863 0.41566029938470017 1.0 ['ENST00000588404.5_1_19:38907704-38910742:-|nuORF'] 63292 10023 LPATLTTA True NCI_RA007_Epitope_Rep4 786.44871946146 786.44762993586 45.398 2 -1.5628301234087867 0.4156784865634291 1.0 ['ENSG00000205277|ENST00000536621|MUC12', 'nc|ENSG00000205277|Q9UKN1|MUC12'] 11257 6505 DERAQESQIDF True H1975_Epitope_Rep2 1336.58952302056 1336.5884299358602 29.938 2 -1.5630836364816227 0.41571963174690635 1.0 ['nc|ENSG00000130779|P30622-2|CLIP1', 'nc|ENSG00000130779|P30622-1|CLIP1', 'ENSG00000130779|ENST00000620786|CLIP1'] 52333 9387 KPFAIEGYGI True PC9_epitope_Rep2 1093.5807962601698 1093.5796899358602 41.443 2 -1.5632012871517411 0.41573781782701025 1.0 ['ENSG00000198785|ENST00000361820|GRIN3A', 'GRIN3A|p.S896Vfs*7|1|0.32|ENSG00000198785|chr9:101613449-101613456|CCATGTGA/-|frameshift_variant', 'GRIN3A|p.G865W|1|0.35|ENSG00000198785|chr9:101623339-101623339|C/A|missense_variant', 'ENSG00000116032|ENST00000234389|GRIN3B'] 85988 11694 QPHIWDFLL True NCI_RA007_Epitope_Rep4 1167.60767971435 1167.60604490379 51.942 3 -1.5632585226856979 0.41573975228715404 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-2|ABCA13'] 15710 9691 EDAERREREER True NCI_RA007_Epitope_Rep1 1473.6920310264902 1473.6909299358601 41.696 2 -1.5632695212048837 0.41573975228715404 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 44206 12172 ILSGLSVPTK True H1975_Epitope_Rep3 1013.61209638845 1013.61098993586 51.99 2 -1.5633332336357628 0.41575316521080363 1.0 ['ENST00000541225.5_1_17:66883094-66937097:-|nuORF', 'ABCA8|p.G1470Afs*8|1|0.21|ENSG00000141338|chr17:68875362-68875362|C/-|frameshift_variant', 'nc|ENSG00000141338|O94911-1|ABCA8', 'ENSG00000141338|ENST00000586539|ABCA8'] 16337 4780 EEKKAMLQEI True H1975_Epitope_Rep3 1217.6325741328499 1217.63092490379 23.512 3 -1.563445995203311 0.41575316521080363 1.0 ['nc|ENSG00000136715|Q9H0E3|SAP130', 'ENSG00000136715|ENST00000643581|SAP130', 'nc|ENSG00000136715|Q9H0E3-3|SAP130', 'nc|ENSG00000136715|Q9H0E3-2|SAP130'] 60280 4939 LIENEEPV True PC9_epitope_Rep1 941.4705771048499 941.46948993586 23.86 2 -1.5635856861882305 0.41577134986225894 1.0 ['ENSG00000166135|ENST00000299163|HIF1AN'] 90356 3496 RIILKIPI True PC9_epitope_Rep2 964.6797224558 964.67862993586 18.728 2 -1.5637078434075304 0.4158124906738903 1.0 ['ENST00000260746.5_1_10:104449690-104459203:-|nuORF'] 113254 18685 TQEKIWEFKGK True PC9_epitope_Rep6 1392.7401504358797 1392.73904993586 84.515 2 -1.5637809896955253 0.4158144232866178 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 90248 23401 RHQILLLA True H1975_Epitope_Rep3 962.6025347642599 962.60142993586 97.677 2 -1.5637952890882665 0.4158144232866178 1.0 ['nc|ENSG00000103449|Q9NSC2-2|SALL1', 'ENSG00000103449|ENST00000251020|SALL1'] 112503 21233 TNTPPVIDVP True PC9_epitope_Rep1 1051.55497543515 1051.5538699358601 86.497 2 -1.5639997136255908 0.4158211285064965 1.0 ['ENSG00000004897|ENST00000066544|CDC27', 'nc|ENSG00000004897|P30260-2|CDC27', 'ENST00000533415.5_1_17:45198303-45266605:-|nuORF', 'ENST00000525495.6_2_17:45219385-45266538:-|nuORF'] 16175 11189 EEEWRQRRR True NCI_RA007_Epitope_Rep2 1343.6806784971498 1343.6795899358601 48.105 2 -1.5640726926661708 0.41585078909612627 1.0 ['ENST00000555166.5_2_14:57857320-57866549:+|nuORF', 'ENST00000554703.1_1_14:57857320-57876115:+|nuORF'] 103292 9320 SQTQKAKFS True PC9_epitope_Rep4 1023.5349086969098 1023.5343749679301 43.458 1 -1.5641382438432894 0.4158527207409873 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 57652 11010 LELWVNYYVRW True NCI_RA007_Epitope_Rep4 1539.7874349814701 1539.78632993586 49.217 2 -1.564180134024114 0.4158527207409873 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 67264 7689 LTDMPDILL True PC9_epitope_Rep6 1029.5416338701298 1029.5405299358601 38.903 2 -1.5642507074351237 0.415859425213479 1.0 ['BCHE|p.A487Pfs*5|1|0.15|ENSG00000114200|chr3:165829576-165829576|T/-|frameshift_variant', 'BCHE|p.W499Vfs*12|1|0.31|ENSG00000114200|chr3:165829539-165829540|-/C|frameshift_variant', 'BCHE|p.A500Qfs*30|1|0.31|ENSG00000114200|chr3:165829536-165829536|C/-|frameshift_variant', 'ENSG00000114200|ENST00000264381|BCHE'] 131024 23361 VVLITTLLVIP True NCI_RA007_Epitope_Rep4 1179.78424709399 1179.7825949037901 101.42 3 -1.5643417686750276 0.4158776067669777 1.0 ['nc|ENSG00000145730|P19021-6|PAM', 'nc|ENSG00000145730|P19021-2|PAM', 'ENSG00000145730|ENST00000438793|PAM', 'nc|ENSG00000145730|P19021-5|PAM', 'ENST00000504456.1_1_5:102343300-102364769:+|nuORF'] 87851 12387 QVKPGSVP True PC9_epitope_Rep2 810.4599528514999 810.45884993586 52.955 2 -1.564399041589938 0.4158843107999541 1.0 ['nc|ENSG00000277399|Q6PRD1|GPR179', 'ENSG00000277399|ENST00000616987|GPR179'] 30821 11272 GAPRGPCK True H1975_Epitope_Rep1 784.4013924295599 784.4008449679301 48.335 1 -1.5645118736550894 0.4158862415645228 1.0 ['ENST00000491277.1_1_1:214706738-214724618:-|nuORF', 'ENST00000486173.1_1_1:214638231-214725660:-|nuORF'] 72155 20345 MRIYRRYIY True H1975_Epitope_Rep2 1332.7124962194 1332.71086490379 84.31 3 -1.5645549382437727 0.4158862415645228 1.0 ['nc|ENSG00000179397|Q5SY80-3|CATSPERE', 'ENSG00000179397|ENST00000366534|CATSPERE'] 67388 12102 LTDVVKPRL True PC9_epitope_Rep2 1039.6389798426299 1039.6378899358601 51.86 2 -1.5647310436773636 0.4158901028277635 1.0 ['chr14:103574170-103584864|155|13.79|0.0|20.39|+|0|TE_info:AluSg,AluSg_dup27341,Alu,SINE,acceptor,+,103584864,103585153|COA8,None|3'] 94188 7168 RWLWWQPWWWK True H1975_Epitope_Rep1 1756.8779217517197 1756.87682993586 32.593 2 -1.5647345887687536 0.4158901028277635 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1'] 127861 22284 VRNRRLHYPI True PC9_epitope_Rep6 1322.76837130274 1322.7667349037902 98.688 3 -1.5647442333553194 0.4158901028277635 1.0 ['ENST00000590244.1_1_17:58543761-58603427:-|nuORF'] 121845 5842 VGNSSWYLY True PC9_epitope_Rep3 1087.49746055903 1087.49636993586 27.538 2 -1.564785686200817 0.4158901028277635 1.0 ['ENSG00000081923|ENST00000648908|ATP8B1', 'ATP8B1|p.L459Hfs*8|1|0.19|ENSG00000081923|chr18:57688351-57688352|GA/-|frameshift_variant'] 60865 25067 LKNEHFAI True NCI_RA007_Epitope_Rep5 970.5236157372199 970.52250993586 103.92 2 -1.5650017463697619 0.41589589405797434 1.0 ['nc|ENSG00000134444|Q9P260|RELCH', 'ENSG00000134444|ENST00000644646|RELCH', 'nc|ENSG00000134444|Q9P260-2|RELCH'] 28981 15023 FTHHIFLWLRW True NCI_RA007_Epitope_Rep2 1554.8248235496999 1554.82372993586 63.12 2 -1.56503733808751 0.41589589405797434 1.0 ['ENSG00000128519|ENST00000249284|TAS2R16'] 48074 3679 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 18.604 3 -1.5650946538911434 0.41589589405797434 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 48076 3817 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 19.284 3 -1.5651608438098887 0.41589589405797434 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 60939 26487 LKYLNKIKPP True PC9_epitope_Rep1 1212.7594293284799 1212.75778490379 107.5 3 -1.565238888229739 0.41589589405797434 1.0 ['ENST00000414066.1_1_10:38107898-38108846:-|nuORF'] 44871 23344 IQAQSKKTK True PC9_epitope_Rep3 1030.61349337078 1030.6123899358602 95.072 2 -1.5652882039542453 0.41589589405797434 1.0 ['ENSG00000119326|ENST00000325551|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-2|CTNNAL1', 'nc|ENSG00000119326|Q9UBT7-3|CTNNAL1'] 30834 17997 GAPVQALRPRR True NCI_RA007_Epitope_Rep4 1219.7261721375899 1219.7250699358601 77.872 2 -1.5655746193191842 0.41593225006885154 1.0 ['ENST00000260324.11_1_15:45927092-45951106:+|nuORF'] 121867 16804 VGPARRLS True H1975_Epitope_Rep1 854.50863437942 854.50752993586 70.044 2 -1.5656042764501537 0.41593225006885154 1.0 ['ENST00000288014.6_1_14:24025414-24025621:+|nuORF'] 3144 12058 AGDSSSHR True H1975_Epitope_Rep3 815.3521933076701 815.35164496793 51.543 1 -1.5656405862837668 0.41593895232084455 1.0 ['ENSG00000104450|ENST00000388798|SPAG1'] 66139 14845 LSPDLSHTTL True PC9_epitope_Rep1 1082.56078909158 1082.5596899358602 61.92 2 -1.5657216070559092 0.415952356363386 1.0 ['ENSG00000198734|ENST00000367797|F5'] 108855 11455 TERFHFYKRYT True H1975_Epitope_Rep3 1546.7680965192196 1546.76698993586 49.181 2 -1.565751895392672 0.415952356363386 1.0 ['ENSG00000117597|ENST00000491415|UTP25'] 17295 6775 EHDIEDSETA True H1975_Epitope_Rep2 1144.45202648824 1144.45039490379 30.975 3 -1.5658390446911428 0.41595428518973254 1.0 ['ENST00000493286.1_1_22:46594271-46615974:+|nuORF', 'ENSG00000186951|ENST00000407236|PPARA'] 140457 24480 YYHISSSA True PC9_epitope_Rep3 926.4133965819 926.41228993586 99.501 2 -1.5659288520646084 0.41595428518973254 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 135329 4529 YCRRWRYWEYW True NCI_RA007_Epitope_Rep2 1765.7936000744096 1765.79194490379 22.246 3 -1.5660059649226845 0.4159609868043603 1.0 ['ENST00000299314.11_1_12:102159966-102161843:-|nuORF'] 58795 16118 LFPVPPGV True PC9_epitope_Rep1 824.4796256669199 824.47852993586 66.814 2 -1.5660436098989599 0.41596768826519487 1.0 ['ENST00000357681.9_1_1:203711927-203711975:+|nuORF'] 131691 23986 VWRFPSVGVLA True PC9_epitope_Rep2 1229.6920780446499 1229.6909899358602 97.757 2 -1.566354988120401 0.4160547090141362 1.0 ['ENST00000448173.5_1_7:72474205-72476389:-|nuORF', 'ENST00000423834.6_1_7:72474205-72476389:-|nuORF'] 55829 17738 LDEQYQKYK True PC9_epitope_Rep6 1213.5979028762897 1213.5968099358602 80.863 2 -1.5664369719946112 0.41607288332013814 1.0 ['ENSG00000155959|ENST00000286428|VBP1', 'nc|ENSG00000155959|P61758-2|VBP1', 'VBP1|p.M63T|1|0.26|ENSG00000155959|chrX:155220277-155220277|T/C|missense_variant'] 104186 4719 SSDDINKFLWM True H1975_Epitope_Rep3 1354.62273772514 1354.6216499358602 23.277 2 -1.5665707904398107 0.41611400509443053 1.0 ['nc|ENSG00000134910|P46977-2|STT3A', 'ENSG00000134910|ENST00000392708|STT3A'] 26136 25460 FHIRVRTA True PC9_epitope_Rep5 998.5773826455799 998.57628993586 103.17 2 -1.5666977424199349 0.416120704491997 1.0 ['ENSG00000080224|ENST00000389672|EPHA6', 'nc|ENSG00000080224|Q9UF33|EPHA6', 'EPHA6|p.Y617C|1|0.14|ENSG00000080224|chr3:97448686-97448686|A/G|missense_variant'] 35832 7795 GTYWVRYIH True PC9_epitope_Rep4 1193.5981776598098 1193.59654490379 37.383 3 -1.5667709819296973 0.41612740373583 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'ENST00000567869.1_1_15:28436080-28447805:-|nuORF'] 121000 3690 VGEWHGGF True PC9_epitope_Rep4 887.3926015676699 887.39150993586 20.324 2 -1.5669240995294513 0.4161455763736705 1.0 ['ENST00000592497.1_1_17:76705671-76778305:-|nuORF', 'ENST00000591095.1_1_17:76705671-76732801:-|nuORF'] 52406 18453 KPGPLRRAH True NCI_RA007_Epitope_Rep1 1030.6148307834599 1030.6137299358602 75.918 2 -1.567058178883631 0.41616951952640996 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 79055 10851 PFRNHFYQFGE True H1975_Epitope_Rep3 1440.65748344108 1440.6558449037902 46.82 3 -1.567058200624403 0.41616951952640996 1.0 ['ENST00000520132.1_1_5:150071315-150073858:-|nuORF'] 137508 18654 YLPTLWVKLYK True NCI_RA007_Epitope_Rep3 1422.8275088883 1422.82585490379 81.611 3 -1.5670734322097937 0.41616951952640996 1.0 ['nc|ENSG00000185164|Q5JPE7|NOMO2', 'ENSG00000185164|ENST00000622306|NOMO2', 'ENSG00000103512|ENST00000287667|NOMO1', 'ENSG00000103226|ENST00000399336|NOMO3', 'nc|ENSG00000185164|Q5JPE7-3|NOMO2', 'ENST00000572932.1_1_16:16374097-16382502:+|nuORF'] 37772 15372 HAWSAFCKALA True PC9_epitope_Rep4 1203.58589872395 1203.58426490379 67.061 3 -1.5671194867916194 0.41616951952640996 1.0 ['nc|ENSG00000177731|Q13045-3|FLII', 'ENST00000578101.5_1_17:18148454-18160363:-|nuORF', 'ENSG00000177731|ENST00000327031|FLII', 'nc|ENSG00000177731|Q13045-2|FLII'] 46444 21793 ITLQWQIAI True PC9_epitope_Rep5 1084.62808080576 1084.6269899358601 88.859 2 -1.56713561759617 0.41616951952640996 1.0 ['ENST00000486157.1_1_5:78825151-78825526:+|nuORF'] 42451 8612 IEQLWRDYNKY True H1975_Epitope_Rep3 1526.7517777487396 1526.75068993586 38.117 2 -1.5671562897757807 0.41616951952640996 1.0 ['ENSG00000176102|ENST00000323959|CSTF3'] 85888 23581 QNKRLQRQLR True PC9_epitope_Rep5 1338.7956486797398 1338.79399490379 95.688 3 -1.5671945235586793 0.41616951952640996 1.0 ['nc|ENSG00000196535|Q92614-3|MYO18A', 'nc|ENSG00000196535|Q92614-4|MYO18A', 'ENSG00000196535|ENST00000527372|MYO18A', 'nc|ENSG00000196535|Q92614-2|MYO18A', 'nc|ENSG00000196535|Q92614-5|MYO18A', 'ENST00000531892.5_1_17:27413633-27417836:-|nuORF', 'ENST00000546105.5_1_17:27401790-27418677:-|nuORF'] 18959 8174 ELFKKRAL True NCI_RA007_Epitope_Rep4 1003.6178504752298 1003.61674993586 38.23 2 -1.5672210403309026 0.4161752896638752 1.0 ['ENSG00000197265|ENST00000355904|GTF2E2'] 59500 12664 LGPLDEDFYLL True PC9_epitope_Rep2 1293.6492697428098 1293.64762490379 54.018 3 -1.5672355819260226 0.4161752896638752 1.0 ['UGGT2|p.A889_Y893del|1|0.16|ENSG00000102595|chr13:95895261-95895275|TAAAAATCTTCTGCA/-|inframe_deletion'] 131551 12959 VVVLLSAE True NCI_RA007_Epitope_Rep4 828.49566965388 828.49456993586 56.941 2 -1.5672382672886345 0.4161752896638752 1.0 ['PIK3AP1-TM9SF3|1|fusion', 'ENSG00000155629|ENST00000339364|PIK3AP1'] 127340 23218 VQNSLLAL True PC9_epitope_Rep4 856.5018176634799 856.50072993586 97.539 2 -1.567262998795004 0.4161752896638752 1.0 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 91597 21184 RPCQAPLG True NCI_RA007_Epitope_Rep5 840.4276071773999 840.4265099358599 88.518 2 -1.5672998662889097 0.4161752896638752 1.0 ['ENST00000248248.7_1_16:77225118-77227542:+|nuORF'] 79325 22714 PGKPYILTV True PC9_epitope_Rep1 986.5800679841799 986.57896993586 92.174 2 -1.5673721395899596 0.4161752896638752 1.0 ['ENSG00000244731|ENST00000428956|C4A', 'ENSG00000224389|ENST00000435363|C4B', 'nc|ENSG00000244731|P0C0L4-2|C4A', 'C4A|p.G1371Efs*8|1|0.15|ENSG00000244731|chr6:31997737-31997737|G/-|frameshift_variant'] 119030 18578 VEGFRKLL True PC9_epitope_Rep4 960.5756513100798 960.57454993586 79.537 2 -1.5674678273168194 0.41619345883378644 1.0 ['ENSG00000141424|ENST00000269187|SLC39A6'] 69743 21003 LWIPAFMVKG True PC9_epitope_Rep6 1160.6416226949198 1160.64052993586 93.613 2 -1.5675160021762629 0.4162269431953749 1.0 ['ENSG00000113532|ENST00000231461|ST8SIA4'] 69569 6956 LVTLSGLS True PC9_epitope_Rep4 788.4643695256 788.46326993586 33.991 2 -1.5676157435547624 0.4162269431953749 1.0 ['ENST00000468123.1_1_2:202340421-202342983:+|nuORF', 'ENST00000478954.1_1_7:150210046-150210850:-|nuORF', 'nc|ENSG00000082146|Q9C0K7-3|STRADB', 'nc|ENSG00000082146|Q9C0K7-2|STRADB', 'ENSG00000082146|ENST00000194530|STRADB'] 102776 8969 SQEMNTLFRFW True PC9_epitope_Rep1 1457.6761702803296 1457.6750699358602 39.344 2 -1.5676488773501627 0.4162269431953749 1.0 ['ENSG00000155506|ENST00000518297|LARP1', 'nc|ENSG00000155506|Q6PKG0-3|LARP1', 'nc|ENSG00000138709|Q659C4-6|LARP1B', 'ENST00000503725.1_1_4:129100626-129141527:+|nuORF', 'ENST00000508648.5_1_4:129100626-129128462:+|nuORF', 'nc|ENSG00000138709|Q659C4-7|LARP1B', 'ENST00000506199.5_1_4:129100626-129141527:+|nuORF', 'nc|ENSG00000138709|Q659C4-5|LARP1B', 'ENST00000507259.5_1_4:129099587-129143542:+|nuORF', 'nc|ENSG00000138709|Q659C4-2|LARP1B', 'ENSG00000138709|ENST00000326639|LARP1B', 'nc|ENSG00000138709|Q659C4-9|LARP1B'] 41520 13783 IDAQDRVLLLH True PC9_epitope_Rep3 1291.72483472491 1291.72372993586 58.095 2 -1.5676905252140938 0.4162269431953749 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 102445 11227 SPWTRFQWRRR True PC9_epitope_Rep2 1574.83309681762 1574.83144490379 48.513 3 -1.567703477908826 0.4162269431953749 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 91976 19127 RPQRLRKRTE True NCI_RA007_Epitope_Rep3 1338.7956486797395 1338.79454993586 83.539 2 -1.56780349586569 0.416233639606777 1.0 ['ENSG00000104980|ENST00000270538|TIMM44'] 15979 5605 EDWWSYKDNL True H1975_Epitope_Rep1 1354.5829810881398 1354.58188993586 26.626 2 -1.5679241031393591 0.41626327743237973 1.0 ['ENSG00000063180|ENST00000084798|CA11'] 83507 14000 QDISLHGG True NCI_RA007_Epitope_Rep2 825.39808087093 825.39753496793 59.115 1 -1.5680396426382486 0.41626997327338006 1.0 ['nc|ENSG00000160299|O95613-2|PCNT', 'ENSG00000160299|ENST00000359568|PCNT'] 108662 5145 TELESPAWWPF True NCI_RA007_Epitope_Rep2 1361.62920300457 1361.62810993586 24.632 2 -1.5682036911087165 0.41631108052305577 1.0 ['ENSG00000143740|ENST00000617596|SNAP47', 'nc|ENSG00000143740|Q5SQN1-2|SNAP47', 'nc|ENSG00000143740|Q5SQN1|SNAP47'] 49098 6507 KGAGGGGP True H1975_Epitope_Rep2 599.3027239341101 599.30217496793 29.945 1 -1.5682996074404227 0.416325453899001 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 5680 24164 APANLYVRELR True PC9_epitope_Rep5 1300.72516907808 1300.72457496793 97.932 1 -1.5683076407943637 0.416325453899001 1.0 ['ENSG00000153707|ENST00000381196|PTPRD', 'nc|ENSG00000153707|P23468-7|PTPRD', 'nc|ENSG00000153707|P23468-5|PTPRD', 'nc|ENSG00000153707|P23468-6|PTPRD', 'nc|ENSG00000153707|P23468-3|PTPRD'] 117389 10809 VADATAIKQHV True H1975_Epitope_Rep3 1151.62987171091 1151.6287699358602 46.656 2 -1.5685012890150192 0.416325453899001 1.0 ['nc|ENSG00000172421|Q8N7B9-2|EFCAB3', 'ENSG00000172421|ENST00000305286|EFCAB3'] 81864 10948 PSKKGASS True NCI_RA007_Epitope_Rep3 760.4079172786401 760.40682993586 50.15 2 -1.5685111553927527 0.416325453899001 1.0 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A', 'UBE3A|p.C108Tfs*7|1|0.24|ENSG00000114062|chr15:25375514-25375515|-/GAGTTGTT|frameshift_variant'] 29493 25930 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 106.49 3 -1.5685626912330912 0.416325453899001 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 52960 21238 KRLSWKIHM True NCI_RA007_Epitope_Rep5 1197.68046781513 1197.67882490379 88.731 3 -1.5685701409961184 0.416325453899001 1.0 ['ENSG00000016391|ENST00000315251|CHDH'] 1727 8179 AEGRHWHMKHF True H1975_Epitope_Rep1 1434.6727566657403 1434.6716499358602 36.401 2 -1.5686202141904604 0.416325453899001 1.0 ['ENSG00000139174|ENST00000345127|PRICKLE1', 'ENSG00000163637|ENST00000638394|PRICKLE2'] 29538 26079 FVIFMFFLN True PC9_epitope_Rep1 1176.6041745570399 1176.60253490379 105.57 3 -1.5686296285889192 0.416325453899001 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 39442 15989 HMWRAHRAI True NCI_RA007_Epitope_Rep3 1176.6086998572 1176.6076099358602 70.563 2 -1.5686550026181796 0.416325453899001 1.0 ['ZBED4|p.F1004Cfs*23|1|0.09|ENSG00000100426|chr22:49886671-49886680|CTTCGCCACG/-|frameshift_variant', 'ZBED4|p.S1127Kfs*14|1|0.22|ENSG00000100426|chr22:49887033-49887034|-/C|frameshift_variant', 'ZBED4|p.H1096Lfs*3|2|0.34|ENSG00000100426|chr22:49886949-49886951|ACA/T|frameshift_variant', 'ENSG00000100426|ENST00000216268|ZBED4'] 27054 11919 FLNWFDERAWY True NCI_RA007_Epitope_Rep4 1545.70409928033 1545.70300993586 52.848 2 -1.5686654701198954 0.41632737323806357 1.0 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 69759 25235 LWLLCRGG True PC9_epitope_Rep2 916.4952928143999 916.49418993586 102.73 2 -1.5686802296733966 0.41632737323806357 1.0 ['ENSG00000256043|ENST00000433477|CTSO'] 104432 15945 SSKKSKVS True NCI_RA007_Epitope_Rep5 849.4919812557699 849.49088993586 68.058 2 -1.5687116276872735 0.41633406734562806 1.0 ['ENST00000560957.1_1_15:86225432-86228206:+|nuORF'] 134200 12642 WRNYRMQFFFY True NCI_RA007_Epitope_Rep1 1656.7659883442398 1656.76488993586 53.155 2 -1.5687529982995088 0.4163407612996456 1.0 ['ENST00000368324.4_1_1:155852837-155852948:+|nuORF'] 3811 8216 AGVPPSKSKK True PC9_epitope_Rep6 997.59202965021 997.59092993586 41.178 2 -1.5688739952695294 0.4163646788990826 1.0 ['ENSG00000055130|ENST00000325222|CUL1'] 20796 1427 EQMYAKYVKM True PC9_epitope_Rep1 1289.6148158937299 1289.61316490379 7.8562 3 -1.5688851490020055 0.4163646788990826 1.0 ['ENSG00000094975|ENST00000263688|SUCO', 'SFT2D2-C1orf9|1|fusion', 'SUCO|p.E1006Rfs*21|1|0.25|ENSG00000094975|chr1:172600164-172600164|G/-|frameshift_variant'] 36244 14805 GVGGGGHG True NCI_RA007_Epitope_Rep3 596.26667277856 596.2661249679301 65.659 1 -1.568934369553028 0.4163646788990826 1.0 ['ENST00000292363.9_1_19:651790-663233:-|nuORF'] 56568 11811 LDVTEQISRF True H1975_Epitope_Rep3 1206.6244519772997 1206.62334993586 50.578 2 -1.5689490902824226 0.4163646788990826 1.0 ['nc|ENSG00000103168|Q15572-2|TAF1C', 'ENSG00000103168|ENST00000566732|TAF1C', 'nc|ENSG00000103168|Q15572|TAF1C', 'ENST00000564208.5_1_16:84215181-84220577:-|nuORF', 'ENST00000537450.5_1_16:84215181-84219087:-|nuORF', 'ENST00000564774.5_1_16:84215181-84218621:-|nuORF'] 98965 7105 SKGATVYS True PC9_epitope_Rep5 811.40758292547 811.40648993586 32.297 2 -1.568975363718968 0.4163646788990826 1.0 ['ENST00000413704.5_1_3:9487316-9517772:+|nuORF', 'ENST00000466242.5_1_3:9484907-9517772:+|nuORF', 'ENST00000492939.5_1_3:9514925-9516846:+|nuORF', 'nc|ENSG00000168137|Q9C0A6-2|SETD5', 'nc|ENSG00000168137|Q9C0A6-3|SETD5', 'ENSG00000168137|ENST00000402198|SETD5'] 84384 11283 QGAVGPEV True PC9_epitope_Rep6 755.38136817763 755.3808149679301 54.415 1 -1.5690568022600313 0.4163646788990826 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 109064 5128 TFDLLAYFTK True NCI_RA007_Epitope_Rep1 1217.63322575585 1217.63158490379 24.029 3 -1.5690570601119251 0.4163646788990826 1.0 ['ENSG00000171806|ENST00000310392|METTL18'] 122593 11490 VGTGRLSWK True H1975_Epitope_Rep1 1002.5610638751 1002.55996993586 49.179 2 -1.569140890931574 0.41637137188793705 1.0 ['ENST00000593203.1_1_19:10943515-10944133:+|nuORF'] 67184 14806 LTDHPRWI True PC9_epitope_Rep2 1036.5454138109599 1036.5443099358602 62.216 2 -1.5692264787220271 0.41640099997706476 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 92404 18963 RQRRATPPA True PC9_epitope_Rep5 1051.5999089953098 1051.5988099358601 77.965 2 -1.5693252761800929 0.4164076923959038 1.0 ['ENST00000608937.5_1_9:137000676-137000952:+|nuORF'] 82848 11634 PVTKMSHP True PC9_epitope_Rep3 895.4585729525099 895.45746993586 49.766 2 -1.5693944006848515 0.41640960954073736 1.0 ['ENST00000532896.5_1_19:18304624-18307257:+|nuORF'] 65970 10884 LSLRAPETVP True PC9_epitope_Rep3 1081.6131590176099 1081.61206993586 46.845 2 -1.5694224422284144 0.41640960954073736 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.A1416Pfs*6|1|0.33|ENSG00000047936|chr6:117353065-117353065|C/-|frameshift_variant', 'ROS1|p.F1067Lfs*13|1|0.31|ENSG00000047936|chr6:117362783-117362783|A/-|frameshift_variant'] 14008 10992 DRWGSRYVD True NCI_RA007_Epitope_Rep5 1152.5312202988 1152.52957490379 48.916 3 -1.5694908820925302 0.41641152659763553 1.0 ['nc|ENSG00000140876|P0C024-3|NUDT7'] 111217 6697 TLFVLFLPFY True PC9_epitope_Rep5 1258.70018311686 1258.69852490379 30.732 3 -1.5695516817851736 0.41641152659763553 1.0 ['ENSG00000197309|ENST00000641351|OR10D3'] 57584 15369 LELGDGGDMFD True H1975_Epitope_Rep2 1167.47540478511 1167.4743099358602 64.275 2 -1.569780856025582 0.4164411521878727 1.0 ['ENSG00000163788|ENST00000296088|SNRK', 'nc|ENSG00000163788|Q9NRH2-2|SNRK', 'ENST00000462810.1_1_3:43344695-43373803:+|nuORF'] 12807 12552 DLITSTKNEKI True NCI_RA007_Epitope_Rep3 1260.69253153712 1260.69142993586 56.613 2 -1.569938595090403 0.41644306845545237 1.0 ['ENSG00000096433|ENST00000605930|ITPR3'] 138511 8885 YRKFRFWNWGL True PC9_epitope_Rep4 1571.8149871419896 1571.81335490379 41.708 3 -1.5699624492420257 0.41644306845545237 1.0 ['ENST00000327827.11_1_16:9212523-9212682:+|nuORF'] 20038 11244 ENAARTAW True NCI_RA007_Epitope_Rep2 917.4355290088099 917.4349849679301 48.323 1 -1.5700873832100726 0.41644498463514196 1.0 ['ENST00000332408.8_1_15:49255166-49255310:-|nuORF'] 27535 21462 FPGYPIHV True NCI_RA007_Epitope_Rep5 928.4806882960798 928.47958993586 89.621 2 -1.570087724203598 0.41644498463514196 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L', 'STON1-GTF2A1L|p.P824Q|1|0.61|ENSG00000068781|chr2:48645088-48645088|C/A|missense_variant', 'STON1-GTF2A1L|p.P824L|1|0.33|ENSG00000068781|chr2:48645088-48645088|C/T|missense_variant', 'STON1-GTF2A1L|p.G826V|1|0.3|ENSG00000068781|chr2:48645094-48645094|G/T|missense_variant', 'STON1-GTF2A1L|p.A825T|1|0.12|ENSG00000068781|chr2:48645090-48645090|G/A|missense_variant'] 135307 23944 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 99.476 2 -1.570150695475992 0.4164469007269475 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 67721 13532 LTGIAQPKK True PC9_epitope_Rep4 954.5862159937799 954.58510993586 59.946 2 -1.5701604599146572 0.4164469007269475 1.0 ['ENSG00000153779|ENST00000283891|TGIF2LX'] 16360 7709 EELAQLAPTP True H1975_Epitope_Rep1 1067.54989005471 1067.5487899358602 34.615 2 -1.5702724278681663 0.4164535916986757 1.0 ['ENSG00000116016|ENST00000263734|EPAS1'] 81395 21157 PPVISPHLK True PC9_epitope_Rep6 986.59130137422 986.59020993586 94.228 2 -1.5702972349103346 0.4164555075272023 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant', 'HMCN1|p.Y4088C|1|0.26|ENSG00000143341|chr1:186122984-186122984|A/G|missense_variant', 'HMCN1-IGLL5|1|fusion'] 41751 5804 IDPGSTER True NCI_RA007_Epitope_Rep5 873.41921023833 873.41810993586 29.011 2 -1.5703393159012875 0.4164555075272023 1.0 ['nc|ENSG00000196557|O95180-2|CACNA1H', 'ENSG00000196557|ENST00000348261|CACNA1H'] 27046 15803 FLNKSFHRDRR True NCI_RA007_Epitope_Rep1 1474.7905632993 1474.78946993586 65.567 2 -1.5704456358099583 0.41645742326786594 1.0 ['ENST00000215906.5_1_22:26829359-26829413:+|nuORF'] 14212 9209 DSVAWVPP True PC9_epitope_Rep1 869.4283183700499 869.4272299358599 40.272 2 -1.5704560251326676 0.41645742326786594 1.0 ['ENST00000530266.5_1_11:20388750-20388831:+|nuORF', 'ENST00000451739.6_2_11:20388750-20398162:+|nuORF'] 137838 20781 YPGGGGGG True PC9_epitope_Rep5 620.25543938852 620.25489496793 84.986 1 -1.570718669150991 0.4164641137353818 1.0 ['ENSG00000185668|ENST00000373012|POU3F1'] 123814 19873 VIVDRPLQV True PC9_epitope_Rep5 1037.6233297784897 1037.62222993586 81.493 2 -1.5709155641489165 0.41648226917829423 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'PCDHA13|p.R619Hfs*37|1|0.2|ENSG00000239389|chr5:140884118-140884119|GC/-|frameshift_variant', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13', 'ENSG00000255408|ENST00000522353|PCDHA3', 'ENSG00000204969|ENST00000526136|PCDHA2', 'PCDHA9|p.Y421Tfs*28|1|0.23|ENSG00000204961|chr5:140849754-140849754|C/-|frameshift_variant', 'ENSG00000249158|ENST00000398640|PCDHA11', 'ENSG00000204965|ENST00000529859|PCDHA5', 'nc|ENSG00000204969|Q9Y5H9-2|PCDHA2', 'PCDHA2|p.Q534Rfs*2|1|0.46|ENSG00000204969|chr5:140796563-140796563|C/-|frameshift_variant', 'PCDHA3|p.R619Hfs*37|2|0.21|ENSG00000255408|chr5:140803049-140803050|GC/-|frameshift_variant', 'nc|ENSG00000204969|Q9Y5H9-3|PCDHA2', 'nc|ENSG00000204965|Q9Y5H7-3|PCDHA5', 'nc|ENSG00000255408|Q9Y5H8-2|PCDHA3', 'nc|ENSG00000249158|Q9Y5I1-2|PCDHA11', 'nc|ENSG00000204965|Q9Y5H7-2|PCDHA5', 'PCDHA11|p.N448Tfs*16|1|0.55|ENSG00000249158|chr5:140870444-140870444|G/-|frameshift_variant', 'PCDHA11|p.G570Afs*10|1|0.25|ENSG00000249158|chr5:140870811-140870811|G/-|frameshift_variant', 'PCDHA3|p.E107Q|1|0.28|ENSG00000255408|chr5:140801516-140801516|G/C|missense_variant', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000250120|Q9Y5I2-2|PCDHA10', 'nc|ENSG00000204961|Q9Y5H5-2|PCDHA9', 'ENSG00000250120|ENST00000307360|PCDHA10', 'nc|ENSG00000250120|Q9Y5I2-3|PCDHA10', 'ENSG00000251664|ENST00000398631|PCDHA12', 'nc|ENSG00000251664|Q9UN75-2|PCDHA12'] 35059 10633 GRFREMLRWFL True NCI_RA007_Epitope_Rep2 1509.8027082061296 1509.8016099358601 45.959 2 -1.5709686794074875 0.416495649083384 1.0 ['nc|ENSG00000141867|O60885-3|BRD4'] 117647 13741 VAIKFARL True H1975_Epitope_Rep2 916.5858220709598 916.58472993586 58.001 2 -1.5709686848432867 0.416495649083384 1.0 ['ENSG00000176148|ENST00000334274|TCP11L1'] 10771 23473 CYLYRRRQQ True NCI_RA007_Epitope_Rep4 1284.6509585919998 1284.6498699358601 101.86 2 -1.5709967335248343 0.41650233880583326 1.0 ['ENST00000464117.1_1_1:201857869-201860971:+|nuORF', 'ENSG00000198892|ENST00000362011|SHISA4'] 129985 20410 VTPELPKSL True PC9_epitope_Rep4 982.5698972232999 982.56880993586 86.653 2 -1.5710532281038458 0.41650713589728894 1.0 ['ENSG00000023516|ENST00000025301|AKAP11'] 24057 6546 EYQGVIAWQG True NCI_RA007_Epitope_Rep2 1149.5454733806098 1149.54436993586 30.075 2 -1.5711032988521134 0.41650713589728894 1.0 ['ENSG00000105722|ENST00000222329|ERF', 'ENST00000596818.1_1_19:42754481-42759151:-|nuORF', 'ENSG00000268041|ENST00000597630|ERFL'] 91309 19109 RMDGLQRALQA True H1975_Epitope_Rep3 1257.66118892253 1257.66008993586 80.123 2 -1.5712138895312069 0.41650713589728894 1.0 ['EMILIN3|p.E399Q|1|0.38|ENSG00000183798|chr20:41362374-41362374|C/G|missense_variant'] 32506 8639 GGPEVTYEPPP True PC9_epitope_Rep1 1141.52915461013 1141.52804993586 38.068 2 -1.5712843809011154 0.41650713589728894 1.0 ['ENSG00000114739|ENST00000352511|ACVR2B', 'ENST00000465020.5_1_3:38495813-38519975:+|nuORF'] 23480 11413 EVYNITDRCL True H1975_Epitope_Rep3 1224.58087291316 1224.5797699358602 49.017 2 -1.5713325013663981 0.41650713589728894 1.0 ['ENST00000298281.8_1_11:82892100-82892172:+|nuORF'] 59932 2691 LHKYYMKRRTL True NCI_RA007_Epitope_Rep2 1507.8445730181097 1507.84237987172 14.693 4 -1.5713391058920363 0.41650713589728894 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'nc|ENSG00000241973|P42356-2|PI4KA'] 26692 14825 FLDDRHRWQRL True NCI_RA007_Epitope_Rep2 1540.801127983 1540.80002993586 62.34 2 -1.571383821270021 0.41650713589728894 1.0 ['ENSG00000125650|ENST00000245810|PSPN'] 210 4917 AAFLPAQTHRP True NCI_RA007_Epitope_Rep3 1207.6461904813898 1207.6450899358601 26.332 2 -1.5714060338047517 0.41650713589728894 1.0 ['ENST00000573070.5_1_17:7297840-7298119:-|nuORF'] 54716 14555 LAELDGLH True PC9_epitope_Rep5 866.4497820906199 866.44868993586 60.985 2 -1.571518110815971 0.41650713589728894 1.0 ['ENSG00000124587|ENST00000304611|PEX6', 'nc|ENSG00000124587|Q13608-3|PEX6'] 33713 25414 GLQVRFLRLAF True PC9_epitope_Rep2 1318.7873754118198 1318.7862699358602 103.44 2 -1.5715242852375322 0.41650713589728894 1.0 ['ENSG00000221838|ENST00000359593|AP4M1'] 79703 23214 PHPAAIAL True PC9_epitope_Rep6 788.45447354824 788.4539249679301 102.39 1 -1.5715655912499202 0.41650713589728894 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 29487 24835 FVIFMFFLN True H1975_Epitope_Rep1 1176.6041745570399 1176.60253490379 102.85 3 -1.5716085977404843 0.4165205130850442 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 120372 17984 VFRPEQDPVP True PC9_epitope_Rep2 1182.6033226099 1182.6022299358601 74.478 2 -1.5716932961346943 0.4165205130850442 1.0 ['nc|ENSG00000116698|Q92540-4|SMG7', 'ENSG00000116698|ENST00000688051|SMG7', 'nc|ENSG00000116698|Q92540-2|SMG7', 'nc|ENSG00000116698|Q92540|SMG7', 'nc|ENSG00000116698|Q92540-5|SMG7'] 137765 12367 YNRLVDYI True PC9_epitope_Rep6 1054.5447451046198 1054.54364993586 58.975 2 -1.5718131653774476 0.4165224268962276 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B', 'ENST00000493587.1_1_8:100883622-100887891:+|nuORF'] 95755 24005 SCPGPCHPSG True H1975_Epitope_Rep1 940.3531219078 940.35202993586 99.617 2 -1.5718545694608723 0.4165224268962276 1.0 ['ENST00000369682.4_1_X:153701276-153701513:+|nuORF'] 65703 8531 LSHLRHLG True NCI_RA007_Epitope_Rep3 931.5351834804301 931.53408993586 40.629 2 -1.5719163385469779 0.4165291150848235 1.0 ['ENST00000533407.6_1_11:6422737-6440257:-|nuORF'] 83427 11835 QCLSSSLLLEK True H1975_Epitope_Rep3 1219.64822419699 1219.6471299358602 50.67 2 -1.5720636791336442 0.4165587281209523 1.0 ['ENSG00000160294|ENST00000291688|MCM3AP', 'ENST00000496607.5_1_21:47655184-47686088:-|nuORF', 'ENST00000467026.5_1_21:47655184-47679082:-|nuORF', 'nc|ENSG00000160294|O60318-2|MCM3AP', 'ENST00000486937.5_1_21:47655184-47666418:-|nuORF'] 13705 14400 DQGVHLLG True NCI_RA007_Epitope_Rep2 837.4344663796498 837.43391496793 60.676 1 -1.5721587479868826 0.41656446639999084 1.0 ['ENST00000341853.5_1_15:100340094-100345094:-|nuORF', 'nc|ENSG00000182397|Q6ZS02|DNM1P46', 'ENST00000561042.5_1_15:100340094-100347099:-|nuORF'] 12872 11162 DLLKIKSEL True NCI_RA007_Epitope_Rep4 1057.63831113629 1057.63720993586 49.809 2 -1.5721922952440737 0.41656446639999084 1.0 ['ZNF277|p.I350Nfs*31|1|0.15|ENSG00000198839|chr7:112340909-112340910|-/A|frameshift_variant', 'ENSG00000198839|ENST00000361822|ZNF277'] 117322 10278 VAAKKAGL True PC9_epitope_Rep2 756.4857736765199 756.48466993586 44.866 2 -1.5722100667374124 0.41656446639999084 1.0 ['SH3TC1|p.G548V|1|0.31|ENSG00000125089|chr4:8227337-8227337|G/T|missense_variant'] 130931 5402 VVILVLLTVL True PC9_epitope_Rep1 1080.75221868972 1080.75112993586 25.612 2 -1.5722820164022495 0.41656446639999084 1.0 ['ENSG00000187266|ENST00000222139|EPOR', 'nc|ENSG00000187266|P19235-3|EPOR'] 102191 18194 SPSHHYRILN True NCI_RA007_Epitope_Rep3 1222.6207040095398 1222.6190549037901 79.684 3 -1.5722987148554766 0.41656446639999084 1.0 ['ENSG00000142149|ENST00000270112|HUNK'] 126485 20171 VPMMYGAGKF True PC9_epitope_Rep1 1099.5194589569098 1099.5188749679298 82.417 1 -1.5723595934153676 0.41656446639999084 1.0 ['ENSG00000140093|ENST00000261994|SERPINA10'] 80063 25340 PKGKPLAL True PC9_epitope_Rep2 822.5327238689399 822.53217496793 103.15 1 -1.5723874902621076 0.416593125737797 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 91447 4512 RNNSYAVIITS True NCI_RA007_Epitope_Rep1 1236.64625005104 1236.64459490379 21.654 3 -1.5723907183014045 0.416593125737797 1.0 ['nc|ENSG00000001626|P13569-2|CFTR', 'ENSG00000001626|ENST00000003084|CFTR'] 130826 23254 VVFLKQLA True PC9_epitope_Rep6 916.5745886809199 916.57348993586 102.55 2 -1.5724290240588235 0.416593125737797 1.0 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF', 'ENST00000414898.1_1_1:241995599-241995785:+|nuORF'] 58318 6955 LETQNRAL True PC9_epitope_Rep1 943.5086939490699 943.50758993586 31.557 2 -1.572572409396475 0.416593125737797 1.0 ['ENSG00000148798|ENST00000369849|INA'] 23132 20070 EVMRKLQKTY True H1975_Epitope_Rep2 1294.7067421326199 1294.70564993586 83.177 2 -1.5725844739318153 0.416593125737797 1.0 ['nc|ENSG00000119383|Q15257-4|PTPA', 'nc|ENSG00000119383|Q15257-3|PTPA', 'ENSG00000119383|ENST00000393370|PTPA', 'nc|ENSG00000119383|Q15257|PTPA'] 73086 10639 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 45.947 1 -1.5726156803713238 0.416593125737797 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 57950 7427 LEQNLLQTL True NCI_RA007_Epitope_Rep1 1070.5971746003001 1070.5960699358602 32.887 2 -1.5726698505703005 0.4165950473833179 1.0 ['ENSG00000109436|ENST00000442267|TBC1D9'] 131541 9765 VVVGVVGY True H1975_Epitope_Rep1 790.45889022234 790.45778993586 42.491 2 -1.572757731763068 0.4165950473833179 1.0 ['ENSG00000140986|ENST00000268661|RPL3L'] 107449 21113 SYVRHERT True PC9_epitope_Rep5 1046.52574099554 1046.52464993586 86.277 2 -1.572804176601607 0.4165950473833179 1.0 ['ENSG00000198342|ENST00000242804|ZNF442', 'nc|ENSG00000198342|Q9H7R0-2|ZNF442'] 25861 6575 FGGLQALNP True H1975_Epitope_Rep3 915.48141657207 915.48030993586 30.246 2 -1.5728832442576273 0.4165950473833179 1.0 ['FAM163B|p.G137C|1|0.15|ENSG00000196990|chr9:133579114-133579114|C/A|missense_variant', 'ENSG00000196990|ENST00000673969|FAM163B'] 119658 6681 VESLTRTL True NCI_RA007_Epitope_Rep5 917.51819600361 917.51708993586 32.366 2 -1.572906779026567 0.4165950473833179 1.0 ['nc|ENSG00000187955|Q05707-3|COL14A1', 'nc|ENSG00000187955|Q05707-2|COL14A1', 'ENSG00000187955|ENST00000297848|COL14A1', 'ENST00000432943.6_1_8:121160081-121289735:+|nuORF', 'COL14A1|p.W717*|1|0.21|ENSG00000187955|chr8:120228722-120228722|G/-|frameshift_variant'] 10357 10817 CIRPSVHCTSS True NCI_RA007_Epitope_Rep5 1188.5379625553599 1188.53632490379 48.242 3 -1.5729358095959065 0.4165950473833179 1.0 ['ENST00000478688.1_1_3:49849301-49849385:-|nuORF'] 82113 13096 PTASPANK True NCI_RA007_Epitope_Rep5 784.4079172786401 784.40682993586 57.054 2 -1.5729512171062996 0.4165950473833179 1.0 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant', 'nc|ENSG00000076108|Q9UIF9-2|BAZ2A', 'nc|ENSG00000076108|Q9UIF9-3|BAZ2A', 'ENSG00000076108|ENST00000549884|BAZ2A', 'nc|ENSG00000076108|Q9UIF9|BAZ2A'] 55520 12613 LAWFWNERFWL True H1975_Epitope_Rep1 1566.77720465094 1566.7761099358602 53.565 2 -1.5730647562749223 0.4165950473833179 1.0 ['CERS6-NOSTRIN|3|fusion', 'CERS6-NOSTRIN|1|fusion', 'CERS6-NOSTRIN|2|fusion', 'CERS6-G6PC2|1|fusion', 'ENSG00000172292|ENST00000305747|CERS6', 'nc|ENSG00000172292|Q6ZMG9-2|CERS6'] 54499 5979 LAACPRCW True NCI_RA007_Epitope_Rep2 918.42041362198 918.41930993586 27.867 2 -1.5731208850215055 0.4165950473833179 1.0 ['ENST00000378052.5_1_7:148991082-148992133:+|nuORF', 'ENST00000480864.1_1_7:148991400-148992133:+|nuORF', 'ENST00000476295.5_1_7:148991497-148992133:+|nuORF', 'ENST00000481519.5_1_7:148990933-148994165:+|nuORF'] 84920 19773 QHTKIRPKDV True NCI_RA007_Epitope_Rep5 1220.69895433024 1220.6978499358602 82.967 2 -1.5731492873091097 0.4165950473833179 1.0 ['nc|ENSG00000196712|P21359-2|NF1', 'nc|ENSG00000196712|P21359-6|NF1', 'ENSG00000196712|ENST00000358273|NF1', 'NF1|p.E2155Vfs*4|1|0.17|ENSG00000196712|chr17:31337401-31337429|CAGAGTTCTCATTACCCAAATTTTACTTG/-|frameshift_variant', 'ENST00000579081.5_2_17:29626598-29701170:+|nuORF', 'NF1|p.H1943Rfs*17|3|0.12|ENSG00000196712|chr17:31334853-31334863|ACCTTTGTTTG/-|frameshift_variant', 'NF1|p.R1970Sfs*6|1|0.43|ENSG00000196712|chr17:31334931-31334932|AA/-|frameshift_variant', 'NF1|p.T2108Nfs*12|1|0.16|ENSG00000196712|chr17:31336808-31336809|-/A|frameshift_variant', 'ENST00000493220.5_2_17:29556858-29657521:+|nuORF'] 111187 6769 TLFFVVWDHKF True PC9_epitope_Rep3 1437.7445075403296 1437.74287490379 31.058 3 -1.573193182015597 0.4165950473833179 1.0 ['ENST00000463205.2_1_2:202503640-202507349:-|nuORF'] 79612 22395 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 93.308 2 -1.5732196447823188 0.4165950473833179 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 74475 18594 NKIYVFFQHAF True PC9_epitope_Rep4 1412.72410644892 1412.72300993586 79.599 2 -1.5732366570019587 0.4165950473833179 1.0 ['ENST00000467617.1_1_22:41363658-41368489:+|nuORF'] 17157 9337 EHADDTQP True H1975_Epitope_Rep2 911.3620892850299 911.36098993586 40.875 2 -1.5732387340613458 0.4165950473833179 1.0 ['nc|ENSG00000103249|P51798-2|CLCN7', 'ENSG00000103249|ENST00000382745|CLCN7', 'ENST00000565092.6_1_16:1496634-1499128:-|nuORF', 'ENST00000563642.6_1_16:1496634-1499487:-|nuORF'] 14410 19754 DTHIFGLM True NCI_RA007_Epitope_Rep5 932.4425885352 932.44148993586 82.893 2 -1.5733101834902055 0.4166017415215399 1.0 ['ENSG00000181939|ENST00000642128|OR4C15'] 52024 21726 KLFTVNTV True NCI_RA007_Epitope_Rep3 920.53311779176 920.53202993586 94.392 2 -1.5733598195506848 0.4166017415215399 1.0 ['ENST00000380763.7_1_X:11129527-11130263:+|nuORF', 'ENST00000380762.4_1_X:11129580-11130263:+|nuORF', 'ENST00000321143.8_1_X:11129465-11130266:+|nuORF'] 48705 15596 KEMMKETFKYF True H1975_Epitope_Rep3 1480.7094445545602 1480.70834993586 65.407 2 -1.5733872285374744 0.4166017415215399 1.0 ['ENSG00000172992|ENST00000651974|DCAKD', 'nc|ENSG00000172992|Q8WVC6-2|DCAKD', 'ENST00000592902.5_1_17:43111330-43112253:-|nuORF'] 25728 23625 FFLFKKLREL True PC9_epitope_Rep3 1339.80162849363 1339.7999849037901 96.162 3 -1.5734586598746358 0.4166017415215399 1.0 ['ENST00000507678.5_1_4:177243228-177249478:+|nuORF'] 95881 4959 SDRFDEGP True NCI_RA007_Epitope_Rep3 921.3828247296099 921.38172993586 26.502 2 -1.5735646683876083 0.4166017415215399 1.0 ['ENSG00000007541|ENST00000321878|PIGQ', 'nc|ENSG00000007541|Q9BRB3|PIGQ', 'nc|ENSG00000007541|Q9BRB3-3|PIGQ'] 7956 5744 ATDKIKFPW True NCI_RA007_Epitope_Rep4 1104.59678067748 1104.59568993586 28.712 2 -1.573574197410678 0.4166017415215399 1.0 ['ENST00000399196.1_1_6:30781990-30782203:-|nuORF'] 29923 26252 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 108.64 3 -1.5736336884842002 0.4166017415215399 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 72608 6367 MVTAETAEAS True PC9_epitope_Rep1 1008.4433763808399 1008.4422699358599 29.3 2 -1.5736595918830738 0.4166017415215399 1.0 ['ENSG00000197410|ENST00000357232|DCHS2'] 32034 12623 GEVIIPKE True H1975_Epitope_Rep2 883.5014833103099 883.5009349679301 53.652 1 -1.5736685615513335 0.4166017415215399 1.0 ['ENSG00000170340|ENST00000301998|B3GNT2', 'nc|ENSG00000170340|Q9NY97-2|B3GNT2'] 35901 12064 GVAGTLIR True PC9_epitope_Rep1 785.4759372688101 785.47484993586 51.265 2 -1.5736980713632682 0.4166017415215399 1.0 ['ENST00000254846.9_1_17:7748661-7748985:+|nuORF'] 80064 24608 PKGKPLAL True PC9_epitope_Rep4 822.5327238689399 822.53217496793 103.15 1 -1.573719078646572 0.4166017415215399 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 140930 17787 YYYRDRDWRWV True H1975_Epitope_Rep3 1676.7848092125198 1676.78370993586 74.407 2 -1.5737289023226244 0.4166017415215399 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 8761 5729 AVEEYVYDFRD True H1975_Epitope_Rep1 1404.6197605196796 1404.61866993586 27.105 2 -1.5737354170847386 0.4166017415215399 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 22870 10678 EVERVRRSERY True H1975_Epitope_Rep1 1477.7749728048097 1477.7738699358601 46.033 2 -1.5737584416346626 0.416608425659651 1.0 ['ENSG00000122678|ENST00000242248|POLM', 'nc|ENSG00000122678|Q9NP87-2|POLM', 'ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 62666 6026 LLVWRMQWQFW True NCI_RA007_Epitope_Rep2 1591.8122102606699 1591.81057490379 28.048 3 -1.5738620116747066 0.4166380238766298 1.0 ['ENST00000464839.5_1_1:89615102-89615213:-|nuORF'] 134366 7648 WSIYLFWYQYH True NCI_RA007_Epitope_Rep2 1604.74523581632 1604.7436049037901 34.375 3 -1.5741483418130426 0.4166857614224829 1.0 ['chr5:53631926-53646233|158|22.7|0.0|15.21|+|0|TE_info:L1PA7,L1PA7_dup4190,L1,LINE,donor,-,53625890,53631926|None,NDUFS4|32'] 28555 8369 FSLLQPVP True H1975_Epitope_Rep3 899.5116540711899 899.51054993586 37.174 2 -1.5741676823567115 0.4166857614224829 1.0 ['ENST00000267102.12_1_12:49498261-49498554:-|nuORF'] 14608 7348 DVIYQVKNDPF True H1975_Epitope_Rep3 1336.66631678928 1336.66520993586 33.241 2 -1.574236645551106 0.4166876704167908 1.0 ['L1M3_dup291|chr1:173794566-173795729:+|1.1397011898258065|0.3648644439828962|1.64|502.0|59|1|anti-sense'] 122903 23133 VGVRRVPPTR True PC9_epitope_Rep5 1135.6938093801498 1135.6927099358602 93.97 2 -1.5742392121004498 0.4166876704167908 1.0 ['ENST00000368039.2_1_1:160771789-160771924:+|nuORF'] 111701 7261 TLPQFMPH True PC9_epitope_Rep5 969.4742230166501 969.47312993586 32.892 2 -1.5744357814378251 0.4167096264219679 1.0 ['LY75|p.Y1401H|1|0.29|ENSG00000054219|chr2:159816985-159816985|A/G|missense_variant'] 59920 17274 LHISSSLVP True H1975_Epitope_Rep1 951.53893144819 951.53838496793 71.906 1 -1.5745103817172792 0.4167096264219679 1.0 ['nc|ENSG00000008118|Q96NX5-2|CAMK1G', 'ENSG00000008118|ENST00000361322|CAMK1G'] 26620 18490 FKRARTRA True H1975_Epitope_Rep2 1004.5991807193199 1004.59808993586 76.725 2 -1.5745727976073374 0.4167096264219679 1.0 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000505306.5_1_17:48154319-48165696:+|nuORF'] 90228 4645 RHLLVLLLLLS True NCI_RA007_Epitope_Rep1 1288.85947772292 1288.85838993586 22.154 2 -1.5745747979703475 0.4167096264219679 1.0 ['ENSG00000104901|ENST00000221498|DKKL1'] 80065 24782 PKGKPLAL True PC9_epitope_Rep4 822.5327238689399 822.53217496793 103.83 1 -1.5745860793792292 0.4167096264219679 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 39633 10260 HPPPLAFL True NCI_RA007_Epitope_Rep5 890.50142374066 890.50032993586 46.095 2 -1.5750157731394379 0.41680318009462386 1.0 ['ENST00000585091.1_1_17:79977083-79977522:-|nuORF'] 80066 24869 PKGKPLAL True PC9_epitope_Rep4 822.5327238689399 822.53217496793 104.17 1 -1.5750195797455584 0.41680318009462386 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 85235 12079 QKKKKKKKK True PC9_epitope_Rep4 1170.8288463009796 1170.82720490379 54.266 3 -1.5752128976122015 0.41681654161177617 1.0 ['nc|ENSG00000070814|Q13428-6|TCOF1', 'nc|ENSG00000070814|Q13428-7|TCOF1', 'nc|ENSG00000070814|Q13428|TCOF1', 'ENSG00000070814|ENST00000643257|TCOF1', 'nc|ENSG00000070814|Q13428-4|TCOF1', 'nc|ENSG00000070814|Q13428-2|TCOF1', 'nc|ENSG00000070814|Q13428-8|TCOF1', 'AluSz6_dup36815|chr15:60362892-60363058:+|1.62841869933328|0.0012375329650786|10.36|502.0|7|3|sense', 'ENSG00000129292|ENST00000395386|PHF20L1', 'ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 78021 22848 PALLYLVPF True PC9_epitope_Rep4 1031.60555445603 1031.60497496793 96.107 1 -1.5753660722290277 0.41681654161177617 1.0 ['nc|ENSG00000157837|Q8TCT6-3|SPPL3', 'ENST00000545209.1_1_12:121202804-121206399:-|nuORF', 'ENST00000392495.7_1_12:121202804-121206971:-|nuORF', 'ENSG00000157837|ENST00000353487|SPPL3'] 4885 16147 ALGFLDPAR True PC9_epitope_Rep1 958.5236157372199 958.52250993586 66.923 2 -1.5754572264380262 0.4168365827395817 1.0 ['ENST00000600689.1_1_19:18974163-18976510:+|nuORF'] 135304 22439 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 93.48 2 -1.5755269893566508 0.4168365827395817 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 115690 7370 TVLEDLESELD True PC9_epitope_Rep5 1261.59254271233 1261.59144993586 33.305 2 -1.5756227267407072 0.4168365827395817 1.0 ['nc|ENSG00000172466|P17028-2|ZNF24', 'ENSG00000172466|ENST00000261332|ZNF24'] 126564 9656 VPPKNQSP True PC9_epitope_Rep1 865.4657665079299 865.46466993586 41.998 2 -1.5757023837726072 0.4168432628094251 1.0 ['nc|ENSG00000171533|Q96JE9-3|MAP6', 'ENSG00000171533|ENST00000304771|MAP6'] 29564 23868 FVIFMFFLN True PC9_epitope_Rep6 1176.6041745570399 1176.60253490379 105.1 3 -1.575907645444791 0.416872852233677 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 4937 10098 ALHNPLPK True NCI_RA007_Epitope_Rep1 888.51813643396 888.51702993586 43.29 2 -1.5759700118148472 0.41688237315313253 1.0 ['ENSG00000092330|ENST00000267415|TINF2', 'nc|ENSG00000092330|Q9BSI4-2|TINF2'] 11475 11895 DGASRSSH True H1975_Epitope_Rep2 815.35219330767 815.35164496793 50.834 1 -1.576021433042112 0.41688237315313253 1.0 ['nc|ENSG00000230246|P0DKV0-2|SPATA31C1', 'nc|ENSG00000230246|P0DKV0|SPATA31C1', 'nc|ENSG00000177910|B4DYI2|SPATA31C2'] 43944 10245 ILESKRLNL True NCI_RA007_Epitope_Rep3 1084.6604435632 1084.65934993586 47.376 2 -1.5760409623925835 0.41688237315313253 1.0 ['nc|ENSG00000139370|Q8N697-2|SLC15A4', 'ENSG00000139370|ENST00000266771|SLC15A4'] 69666 13090 LVVVFRDLR True NCI_RA007_Epitope_Rep4 1115.6815133609498 1115.68040993586 57.451 2 -1.576133548068027 0.41688237315313253 1.0 ['SLC11A1|p.A416V|1|0.61|ENSG00000018280|chr2:218393063-218393063|C/T|missense_variant'] 11804 6377 DHLGDPRD True PC9_epitope_Rep1 923.40970818379 923.40860993586 29.338 2 -1.5761631837324372 0.41688237315313253 1.0 ['ENST00000511805.5_1_4:3344715-3380011:+|nuORF', 'ENST00000382788.7_1_4:3344685-3415804:+|nuORF', 'ENST00000502947.1_1_4:3319716-3344781:+|nuORF'] 104502 22948 SSPRRRSR True PC9_epitope_Rep2 1000.56385783976 1000.56276993586 93.764 2 -1.5762526184835501 0.41688237315313253 1.0 ['ENST00000479849.1_1_21:46327920-46330539:-|nuORF'] 113274 23475 TQGGYVKI True H1975_Epitope_Rep3 864.4705175351999 864.46942993586 97.967 2 -1.5762975605184886 0.41688237315313253 1.0 ['ENSG00000115760|ENST00000421745|BIRC6', 'LTBP1-BIRC6|1|fusion'] 43189 4065 IGSVNKQK True NCI_RA007_Epitope_Rep5 872.5079656730799 872.50686993586 22.081 2 -1.5763401608035412 0.41688237315313253 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 122122 16203 VGRGRGLP True NCI_RA007_Epitope_Rep5 810.4824196315799 810.48187496793 69.068 1 -1.5763518371148144 0.41688237315313253 1.0 ['ENSG00000188177|ENST00000409871|ZC3H6', 'ZC3H6|p.K223R|1|0.19|ENSG00000188177|chr2:112311858-112311858|A/G|missense_variant', 'ENST00000476511.1_1_2:113067635-113069532:+|nuORF'] 66147 14758 LSPDLSHTTL True PC9_epitope_Rep5 1082.56078909158 1082.5596899358602 61.766 2 -1.5763623118100767 0.41688237315313253 1.0 ['ENSG00000198734|ENST00000367797|F5'] 134092 22523 WQTKSHALKVI True PC9_epitope_Rep3 1309.75065554993 1309.7495499358602 91.91 2 -1.5765351009346675 0.4169005050909966 1.0 ['CCKAR|p.G398Efs*24|1|0.41|ENSG00000163394|chr4:26481732-26481732|C/-|frameshift_variant', 'ENSG00000163394|ENST00000295589|CCKAR'] 34064 17995 GNRLRAELGR True NCI_RA007_Epitope_Rep3 1140.64758746372 1140.64648993586 78.85 2 -1.5765707012747598 0.4169071834341213 1.0 ['ENSG00000176155|ENST00000694881|CCDC57'] 33910 8699 GMDLQRPDSYQ True NCI_RA007_Epitope_Rep2 1308.57685016188 1308.5757499358601 38.486 2 -1.5767010056068294 0.41692912033166507 1.0 ['ENST00000392617.7_1_17:72667365-72740608:+|nuORF'] 74995 10155 NLWWEKRQHYR True NCI_RA007_Epitope_Rep2 1614.81677804714 1614.81568993586 44.089 2 -1.576715867841963 0.41692912033166507 1.0 ['ENST00000411999.1_1_2:197893450-197893558:-|nuORF'] 125413 21537 VLTKVGKG True PC9_epitope_Rep6 800.5119884243599 800.51088993586 95.716 2 -1.5767499484613685 0.41692912033166507 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 39813 17148 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 71.238 3 -1.5767551474048835 0.41692912033166507 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 131239 18364 VVPSRPLL True PC9_epitope_Rep3 879.5541875895099 879.55308993586 75.848 2 -1.576762505947427 0.41692912033166507 1.0 ['nc|ENSG00000099957|O15547-2|P2RX6', 'ENSG00000099957|ENST00000413302|P2RX6'] 25263 5338 FEDFYRFMDNL True PC9_epitope_Rep3 1495.6442014457095 1495.6425449037902 25.61 3 -1.5768086724285226 0.4169310230304974 1.0 ['ENSG00000155970|ENST00000318063|MICU3'] 111988 11860 TLSNLLRSV True PC9_epitope_Rep2 1001.58694426977 1001.58584993586 50.946 2 -1.5768651132248388 0.4169310230304974 1.0 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 81212 9402 PPLPAGFP True NCI_RA007_Epitope_Rep1 794.4326754745 794.43156993586 40.563 2 -1.5769869578352484 0.4169567607182118 1.0 ['nc|ENSG00000198933|A7MCY6-2|TBKBP1'] 64696 25326 LRLKGHWRTP True PC9_epitope_Rep3 1262.7360085453 1262.73490993586 102.83 2 -1.5770445402991125 0.4169567607182118 1.0 ['ENST00000559463.5_1_19:55897333-55897543:+|nuORF'] 138001 23889 YQARRLRI True PC9_epitope_Rep1 1074.6410455312998 1074.6399499358602 96.69 2 -1.577066672764379 0.4169567607182118 1.0 ['ENSG00000031698|ENST00000234677|SARS1', 'ENST00000468588.1_1_1:109779017-109779290:+|nuORF'] 138717 16619 YRWPRYFENGK True H1975_Epitope_Rep1 1514.7418817713794 1514.7407899358602 69.302 2 -1.5771042647045628 0.4169567607182118 1.0 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B'] 82899 10536 PVYPPGFSRGP True PC9_epitope_Rep3 1172.5978433066398 1172.59674993586 45.467 2 -1.5772499660417303 0.4169567607182118 1.0 ['PKD1L1|p.R1956Pfs*77|1|0.33|ENSG00000158683|chr7:47836996-47836997|GC/-|frameshift_variant'] 4741 19982 ALEASHRSRPK True NCI_RA007_Epitope_Rep2 1250.68436689526 1250.6827349037899 82.727 3 -1.5772678950267596 0.4169567607182118 1.0 ['nc|ENSG00000091622|Q9BZ71-2|PITPNM3', 'nc|ENSG00000091622|Q9BZ71-3|PITPNM3', 'ENSG00000091622|ENST00000262483|PITPNM3'] 52997 23580 KRRDHRKTAK True PC9_epitope_Rep5 1294.7694339318998 1294.76832993586 95.687 2 -1.577306476990637 0.4169567607182118 1.0 ['ENST00000397861.6_1_17:54910299-54910416:-|nuORF'] 121431 5373 VGIFPGLW True PC9_epitope_Rep6 887.4905247037899 887.48942993586 28.531 2 -1.5773418890464372 0.4169567607182118 1.0 ['ENST00000525245.1_1_11:71164408-71171979:+|nuORF'] 18068 10075 EIKDLCCGHC True H1975_Epitope_Rep3 1119.45112169691 1119.4500299358601 43.792 2 -1.577366199176619 0.4169567607182118 1.0 ['nc|ENSG00000103995|O94986-1|CEP152', 'nc|ENSG00000103995|O94986-2|CEP152', 'ENSG00000103995|ENST00000380950|CEP152'] 79634 15486 PHEGSFGF True NCI_RA007_Epitope_Rep5 876.37661715036 876.37552993586 66.262 2 -1.5775586609778043 0.41697011336310547 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 78730 4341 PEFKMQWPE True NCI_RA007_Epitope_Rep4 1190.5430308524599 1190.54192993586 23.041 2 -1.5776118697612576 0.41697011336310547 1.0 ['ENST00000487694.7_2_3:75956101-75986702:+|nuORF'] 113253 15185 TQEKIWEFKGK True NCI_RA007_Epitope_Rep2 1392.7401504358797 1392.73904993586 63.758 2 -1.5777244142877616 0.416990141183745 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 62519 8260 LLSTVAAV True H1975_Epitope_Rep2 772.4694549060399 772.46834993586 36.724 2 -1.577736445252923 0.416990141183745 1.0 ['ENSG00000106688|ENST00000262352|SLC1A1'] 22820 17602 EVEAVKFLK True PC9_epitope_Rep5 1061.6120963884498 1061.61098993586 72.714 2 -1.5777376152358566 0.416990141183745 1.0 ['ENSG00000277363|ENST00000617146|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-2|SRCIN1', 'nc|ENSG00000277363|Q9C0H9-4|SRCIN1'] 61470 10218 LLFGPREL True PC9_epitope_Rep5 943.5491022090699 943.54800993586 44.291 2 -1.5777903624518628 0.4169919974355158 1.0 ['ENST00000398073.6_1_12:58213863-58214004:-|nuORF'] 119915 11717 VEWQEDFRELF True H1975_Epitope_Rep3 1496.6935941662798 1496.69248993586 50.211 2 -1.5778179682495868 0.4169919974355158 1.0 ['nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 106376 1562 SVSRIHRSIAE True H1975_Epitope_Rep1 1253.68403254209 1253.68237490379 8.1347 3 -1.577924478122152 0.4169919974355158 1.0 ['ENSG00000066084|ENST00000301180|DIP2B'] 55810 9084 LDELSLFGP True H1975_Epitope_Rep1 989.5069626135698 989.50586993586 39.845 2 -1.5779271834387174 0.4169919974355158 1.0 ['ENSG00000115165|ENST00000264192|CYTIP', 'nc|ENSG00000115165|O60759-2|CYTIP'] 26964 7843 FLIWWHWYNHT True NCI_RA007_Epitope_Rep2 1601.75680355953 1601.7551549037898 35.136 3 -1.57796197374467 0.4169919974355158 1.0 ['ENST00000304661.5_1_X:119759908-119760061:-|nuORF'] 90287 22956 RHSERVRAA True PC9_epitope_Rep4 1080.5900725876 1080.5889699358602 96.521 2 -1.5779690840566598 0.4169919974355158 1.0 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1'] 62084 25211 LLNGKKRRRWI True PC9_epitope_Rep2 1438.8997198254597 1438.89862993586 102.64 2 -1.578005400797204 0.4169919974355158 1.0 ['ENST00000465300.5_1_2:29237346-29245107:+|nuORF'] 120190 23999 VFLKYKRQV True PC9_epitope_Rep2 1179.7128134892298 1179.7111649037902 97.807 3 -1.578014658804901 0.4169919974355158 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 111629 11456 TLNRQKYRHVD True NCI_RA007_Epitope_Rep1 1428.75859446468 1428.7574899358601 48.527 2 -1.5780294120402185 0.4169919974355158 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 102447 10633 SPWTRFQWRRR True PC9_epitope_Rep4 1574.83309681762 1574.83144490379 48.65 3 -1.57815893022906 0.4169919974355158 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 91891 22705 RPPGGGGG True PC9_epitope_Rep4 653.32452200785 653.3239749679301 95.562 1 -1.5781598072022893 0.4169919974355158 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 878 4640 ADLPSHPK True NCI_RA007_Epitope_Rep5 863.4501164437901 863.44900993586 24.527 2 -1.5781741609508062 0.4169919974355158 1.0 ['ENST00000368409.7_1_1:155041410-155041584:+|nuORF'] 18849 9712 ELEFFLFVVF True H1975_Epitope_Rep1 1288.67436229184 1288.6732699358602 42.284 2 -1.5781760525953445 0.4169919974355158 1.0 ['ENSG00000166884|ENST00000300127|OR4D6', 'OR4D6|p.G152Vfs*9|1|0.31|ENSG00000166884|chr11:59457414-59457414|G/-|frameshift_variant', 'OR4D6|p.M281Cfs*2|2|0.3|ENSG00000166884|chr11:59457796-59457796|C/-|frameshift_variant'] 43809 23458 IKKSRRTE True NCI_RA007_Epitope_Rep3 1016.60907669668 1016.60796993586 101.81 2 -1.5782326343869655 0.4169919974355158 1.0 ['CEP152|p.T331R|1|0.29|ENSG00000103995|chr15:48788982-48788982|G/C|missense_variant'] 12465 26704 DKRREYVYQL True PC9_epitope_Rep1 1368.7149983171998 1368.71390993586 108.56 2 -1.5782723177900726 0.4169986719787517 1.0 ['PPP4R1|p.L741V|2|0.37|ENSG00000154845|chr18:9553392-9553392|G/C|missense_variant'] 117750 25238 VALKPLGGL True H1975_Epitope_Rep2 866.5589386167799 866.55784993586 103.68 2 -1.5783314539045656 0.4170053463691628 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 21519 22507 ERRLIKKEM True PC9_epitope_Rep4 1201.6965118020898 1201.6948649037902 94.803 3 -1.5784109058337141 0.4170072466256826 1.0 ['ENSG00000188674|ENST00000341287|C2orf80', 'ENST00000423952.2_2_2:209047713-209051710:-|nuORF'] 126009 18775 VPAGHNKWS True PC9_epitope_Rep5 994.49846361854 994.49736993586 77.231 2 -1.578440871011621 0.4170072466256826 1.0 ['ENSG00000136463|ENST00000258975|TACO1', 'ENST00000581120.1_1_17:61678442-61683801:+|nuORF'] 122780 9540 VGVHINIT True NCI_RA007_Epitope_Rep1 851.48650195251 851.48540993586 41.106 2 -1.5785248594202614 0.41701392068870774 1.0 ['ENSG00000174469|ENST00000361727|CNTNAP2', 'CNTNAP2|p.Q439K|1|0.17|ENSG00000174469|chr7:147132476-147132476|C/A|missense_variant'] 63726 14946 LPQTPASVP True PC9_epitope_Rep5 908.4967322830399 908.49618496793 62.492 1 -1.5786234206425758 0.417015820683655 1.0 ['nc|ENSG00000187144|Q7Z572-2|SPATA21', 'ENSG00000187144|ENST00000335496|SPATA21'] 123682 8162 VINVIRVTI True NCI_RA007_Epitope_Rep4 1025.6597152872098 1025.65860993586 38.184 2 -1.5787581592354722 0.417015820683655 1.0 ['ENST00000570162.1_1_15:41102303-41103086:+|nuORF'] 105605 15160 SVEKVIQVP True PC9_epitope_Rep3 997.5807962601699 997.57968993586 63.455 2 -1.5787974366200574 0.4170177205916022 1.0 ['nc|ENSG00000143416|Q13228-3|SELENBP1', 'ENSG00000143416|ENST00000368868|SELENBP1', 'nc|ENSG00000143416|Q13228-4|SELENBP1', 'ENST00000427977.6_1_1:151337413-151341586:-|nuORF', 'ENST00000455397.5_1_1:151337021-151341586:-|nuORF', 'ENST00000443708.5_1_1:151337021-151341586:-|nuORF', 'nc|ENSG00000143416|Q13228-2|SELENBP1'] 45827 6700 ISPSAFGEILY True H1975_Epitope_Rep1 1195.6124903112698 1195.6113899358602 30.817 2 -1.578807312227142 0.4170177205916022 1.0 ['ENSG00000100325|ENST00000307790|ASCC2', 'nc|ENSG00000100325|Q9H1I8-2|ASCC2', 'ENST00000458594.5_1_22:30197094-30223519:-|nuORF', 'ENST00000465667.6_1_22:30218318-30228314:-|nuORF'] 36521 23507 GVKLIKQRHE True PC9_epitope_Rep3 1206.7196897748202 1206.71858993586 95.698 2 -1.5789626338553486 0.4170243941527296 1.0 ['nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'ENSG00000197748|ENST00000357060|CFAP43'] 132996 25211 VYVIQEQA True PC9_epitope_Rep1 948.4916469025999 948.49054993586 101.86 2 -1.579024804718009 0.41703106756107056 1.0 ['ENSG00000229972|ENST00000440739|IQCF3'] 117925 8817 VAQQRYWEWTP True NCI_RA007_Epitope_Rep4 1462.6993482530597 1462.69824993586 40.724 2 -1.5792032363653243 0.4170606348515894 1.0 ['ENST00000314117.8_1_4:37650968-37687967:-|nuORF'] 24080 5996 EYQREGIPW True H1975_Epitope_Rep3 1176.5563724174797 1176.55526993586 28.076 2 -1.5792355502899849 0.4170673076923077 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'ENSG00000176658|ENST00000318217|MYO1D'] 10417 24942 CLQPKCFTTT True PC9_epitope_Rep2 1140.5307519166 1140.52964993586 101.61 2 -1.5793777128894342 0.4170825511652397 1.0 ['ENST00000381920.7_1_16:8736022-8736337:+|nuORF'] 133934 20229 WNWRHMLE True PC9_epitope_Rep4 1170.5392828847 1170.5381899358601 85.951 2 -1.5793799520398468 0.4170825511652397 1.0 ['ENST00000427574.6_1_11:76156149-76164398:+|nuORF'] 63465 10769 LPHFESLGKQ True PC9_epitope_Rep5 1154.6084079903399 1154.60730993586 46.415 2 -1.5794596095303859 0.4170825511652397 1.0 ['nc|ENSG00000077254|Q8TEY7|USP33', 'ENST00000528150.1_1_1:78206598-78225465:-|nuORF', 'nc|ENSG00000077254|Q8TEY7-3|USP33'] 115338 10066 TVEDFNRAL True PC9_epitope_Rep6 1063.52982331647 1063.5287299358602 49.31 2 -1.5794624317724826 0.4170825511652397 1.0 ['ENSG00000162227|ENST00000294168|TAF6L', 'ENST00000524976.5_1_11:62538888-62549806:+|nuORF', 'TAF6L|p.K357Sfs*93|1|0.4|ENSG00000162227|chr11:62786368-62786369|AA/-|frameshift_variant', 'ENST00000532915.1_1_11:62538888-62545815:+|nuORF'] 81382 17942 PPTPLICLLS True NCI_RA007_Epitope_Rep5 1052.59400379616 1052.59290993586 75.801 2 -1.5794859604735432 0.4170844493281139 1.0 ['DNAH5|p.R4042P|1|0.35|ENSG00000039139|chr5:13721154-13721154|C/G|missense_variant'] 36565 3883 GVLDWKLDFHW True NCI_RA007_Epitope_Rep5 1414.70337100434 1414.7022699358602 21.213 2 -1.5794916776215777 0.4170844493281139 1.0 ['ENSG00000131386|ENST00000339732|GALNT15'] 122627 4305 VGTLSQLR True NCI_RA007_Epitope_Rep4 872.50796567308 872.50686993586 22.903 2 -1.5795730746101657 0.4170911213616125 1.0 ['ENST00000549648.5_1_16:699416-706047:+|nuORF', 'ENST00000420061.6_1_16:699416-706047:+|nuORF', 'ENST00000552943.5_1_16:704926-706047:+|nuORF'] 120776 19340 VGCGFCGK True H1975_Epitope_Rep1 769.3251162548099 769.3245649679301 80.567 1 -1.5797025882608822 0.4171206849189635 1.0 ['UGT2A3|p.Q331Tfs*23|1|0.24|ENSG00000135220|chr4:68932633-68932634|-/T|frameshift_variant', 'ENSG00000135220|ENST00000251566|UGT2A3'] 124903 26553 VLLQAFDIM True H1975_Epitope_Rep3 1048.56270366788 1048.5616099358601 110.86 2 -1.5800540712115847 0.4171912555797184 1.0 ['ENST00000490322.1_1_1:245912867-245977658:-|nuORF'] 19404 17302 ELPFLTHVN True NCI_RA007_Epitope_Rep3 1068.5603951687601 1068.55928993586 75.938 2 -1.5800651361663571 0.4171912555797184 1.0 ['ENSG00000178971|ENST00000651323|CTC1'] 40529 11498 HSPLLQPGL True PC9_epitope_Rep2 960.53926580136 960.53816993586 49.55 2 -1.580082476673287 0.41719792608531436 1.0 ['ENSG00000137561|ENST00000260116|TTPA'] 117613 11053 VAGWYLEH True NCI_RA007_Epitope_Rep2 973.4657665079299 973.46466993586 47.59 2 -1.5801916287316728 0.4172055070440266 1.0 ['ENSG00000141385|ENST00000269143|AFG3L2', 'ENST00000588893.1_1_18:12344091-12348281:-|nuORF'] 29566 24199 FVIFMFFLN True PC9_epitope_Rep6 1176.6041745570399 1176.60253490379 106.8 3 -1.580196183522452 0.4172055070440266 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 86436 5066 QQQVPVTPQ True NCI_RA007_Epitope_Rep5 1023.5349086969097 1023.53380993586 26.188 2 -1.5802684028969831 0.4172055070440266 1.0 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 85838 28054 QMREFLEQLP True H1975_Epitope_Rep2 1289.6438075228898 1289.64217490379 116.93 3 -1.5803053498056758 0.4172055070440266 1.0 ['ENSG00000129534|ENST00000310806|MIS18BP1', 'ENST00000469020.5_1_14:45679581-45687560:-|nuORF'] 105318 11284 STVDYLLRLQ True H1975_Epitope_Rep3 1206.66083748602 1206.6597499358602 48.509 2 -1.580309856959573 0.4172055070440266 1.0 ['RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3'] 846 12320 ADGGGGGS True NCI_RA007_Epitope_Rep1 576.21396849936 576.2134249679301 51.893 1 -1.5804651474763256 0.4172055070440266 1.0 ['ENSG00000228075|ENST00000585477|BOD1L2'] 40530 10906 HSPLLQPGL True PC9_epitope_Rep4 960.53926580136 960.53816993586 49.717 2 -1.5804699751945455 0.4172055070440266 1.0 ['ENSG00000137561|ENST00000260116|TTPA'] 127826 17622 VRLPRKRNA True NCI_RA007_Epitope_Rep3 1108.69414373332 1108.69304993586 77.27 2 -1.5805056170473648 0.4172055070440266 1.0 ['ENST00000431058.1_1_7:54724196-54724400:+|nuORF'] 12969 6463 DLPGNPGP True PC9_epitope_Rep2 765.36571811349 765.36462993586 30.273 2 -1.5806634425887418 0.41720740206681084 1.0 ['COL15A1|p.G1056D|1|0.29|ENSG00000204291|chr9:99055347-99055347|G/A|missense_variant'] 122104 9269 VGRFPPKL True NCI_RA007_Epitope_Rep3 912.5545219426798 912.55342993586 43.567 2 -1.5806677077107134 0.41720740206681084 1.0 ['ENST00000591584.1_1_17:40925493-40926039:+|nuORF'] 79902 10739 PINDIRIIA True NCI_RA007_Epitope_Rep3 1023.60767971435 1023.6065899358599 49.29 2 -1.5807150224569864 0.4172168758796672 1.0 ['SLC12A3|p.E912*|1|0.29|ENSG00000070915|chr16:56902382-56902383|-/T|frameshift_variant', 'ENSG00000070915|ENST00000563236|SLC12A3', 'nc|ENSG00000070915|P55017-3|SLC12A3', 'nc|ENSG00000070915|P55017-2|SLC12A3'] 100765 8665 SLRPMQKE True NCI_RA007_Epitope_Rep4 987.51715045779 987.51604993586 40.115 2 -1.5807413537675346 0.4172168758796672 1.0 ['ENST00000394532.7_1_11:64037551-64037644:-|nuORF'] 79873 24542 PIKRNAILHR True H1975_Epitope_Rep1 1216.7516586094398 1216.75056993586 101.7 2 -1.5807465169074586 0.4172168758796672 1.0 ['nc|ENSG00000197168|Q6P3R8|NEK5', 'ENSG00000197168|ENST00000684899|NEK5'] 93975 22029 RVPCLIPP True PC9_epitope_Rep1 893.5156939058099 893.51458993586 89.549 2 -1.580865031805996 0.4172168758796672 1.0 ['ENST00000583167.5_1_17:45892556-45892844:-|nuORF'] 30994 18212 GATNVDLK True NCI_RA007_Epitope_Rep2 816.4341320264799 816.4335849679301 75.599 1 -1.5809068784300626 0.4172168758796672 1.0 ['ENST00000579700.1_1_7:76669357-76673036:+|nuORF'] 120657 5496 VGALRALH True NCI_RA007_Epitope_Rep5 835.50282072299 835.50172993586 27.829 2 -1.580945441976352 0.4172168758796672 1.0 ['ENST00000605573.1_1_3:187871072-187871573:-|nuORF'] 108690 12268 TELTIESEA True PC9_epitope_Rep1 991.4709710276699 991.46986993586 52.045 2 -1.5810583329498185 0.4172168758796672 1.0 ['ENST00000398849.6_1_17:28942955-28960136:+|nuORF'] 89388 3890 REMHVWRKVF True NCI_RA007_Epitope_Rep1 1386.7342942931398 1386.73264490379 19.156 3 -1.5810852905716108 0.4172168758796672 1.0 ['ARC|p.E118K|1|0.14|ENSG00000198576|chr8:142613920-142613920|C/T|missense_variant'] 80058 25179 PKGKPLAL True NCI_RA007_Epitope_Rep5 822.5327238689399 822.53217496793 104.37 1 -1.581094621977814 0.4172168758796672 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 58319 10123 LETQNRAL True PC9_epitope_Rep2 943.5086939490699 943.50758993586 44.276 2 -1.5811008206084125 0.4172168758796672 1.0 ['ENSG00000148798|ENST00000369849|INA'] 85918 9270 QNRWKRQNFHE True NCI_RA007_Epitope_Rep2 1541.7599914470095 1541.75888993586 40.668 2 -1.5811746632687849 0.41724165551016673 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 19511 20460 ELQLEIFH True PC9_epitope_Rep1 1027.53384606775 1027.53274993586 83.511 2 -1.5811766356184067 0.41724165551016673 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 95952 5460 SDYSFSVIAMS True PC9_epitope_Rep5 1205.52744035797 1205.52634993586 26.012 2 -1.5812920702403919 0.4172435494021397 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 103289 10274 SQTQKAKFS True PC9_epitope_Rep1 1023.5349086969098 1023.5343749679301 44.404 1 -1.5813383414955564 0.4172435494021397 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 131372 16329 VVSKPVTV True NCI_RA007_Epitope_Rep4 827.51165407119 827.51054993586 70.806 2 -1.5814458033254712 0.4172492305580028 1.0 ['ENSG00000196700|ENST00000369888|ZNF512B'] 58519 20632 LFAGEATHRT True PC9_epitope_Rep3 1101.55670677065 1101.55560993586 84.632 2 -1.5814572512301106 0.4172492305580028 1.0 ['ENST00000368535.2_1_10:135193041-135204956:+|nuORF', 'ENSG00000148832|ENST00000278060|PAOX', 'ENST00000468317.2_1_10:135204824-135209219:+|nuORF', 'ENST00000530555.1_1_10:135204586-135204956:+|nuORF', 'ENST00000476834.6_1_10:135196418-135204956:+|nuORF'] 74996 14902 NLWWEKRQHYR True PC9_epitope_Rep5 1614.81677804714 1614.81568993586 62.324 2 -1.5814602142494003 0.4172492305580028 1.0 ['ENST00000411999.1_1_2:197893450-197893558:-|nuORF'] 74398 3801 NITVECVPVDL True NCI_RA007_Epitope_Rep2 1200.6060250318399 1200.6049299358601 19.421 2 -1.5815351256514465 0.4172492305580028 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 80059 25273 PKGKPLAL True NCI_RA007_Epitope_Rep5 822.5327238689399 822.53217496793 104.75 1 -1.58157912238724 0.4172492305580028 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 58651 6998 LFGSLGHK True PC9_epitope_Rep4 857.4759372688101 857.47484993586 34.164 2 -1.5816401658160906 0.4172492305580028 1.0 ['nc|ENSG00000140090|Q8NFF2-3|SLC24A4', 'ENSG00000140090|ENST00000532405|SLC24A4'] 65967 10879 LSLRAPETVP True PC9_epitope_Rep1 1081.6131590176099 1081.61206993586 46.73 2 -1.5816827750684672 0.41726256535816847 1.0 ['ENSG00000047936|ENST00000368507|ROS1', 'nc|ENSG00000047936|P08922|ROS1', 'ROS1|p.A1416Pfs*6|1|0.33|ENSG00000047936|chr6:117353065-117353065|C/-|frameshift_variant', 'ROS1|p.F1067Lfs*13|1|0.31|ENSG00000047936|chr6:117362783-117362783|A/-|frameshift_variant'] 60598 24852 LISKLTTKL True NCI_RA007_Epitope_Rep5 1015.66413196131 1015.66357496793 103.08 1 -1.581687140006977 0.41726256535816847 1.0 ['L1M3_dup291|chr1:173794566-173795729:+|1.1397011898258065|0.3648644439828962|1.64|502.0|40|3|sense'] 111630 11201 TLNRQKYRHVD True NCI_RA007_Epitope_Rep2 1428.75859446468 1428.7574899358601 48.153 2 -1.5818230949523806 0.4172692325294037 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 111626 10810 TLNRQKYRHVD True H1975_Epitope_Rep1 1428.75859446468 1428.7574899358601 46.544 2 -1.5818937063227771 0.41727589954808075 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 80060 25365 PKGKPLAL True NCI_RA007_Epitope_Rep5 822.5327238689399 822.53217496793 105.1 1 -1.5820253727643432 0.4172940072763883 1.0 ['ENSG00000135778|ENST00000366628|NTPCR', 'ENST00000487953.1_1_1:233091430-233112053:+|nuORF', 'ENST00000494689.5_1_1:233086425-233113974:+|nuORF'] 23310 11663 EVSRRSLRS True PC9_epitope_Rep1 1088.6050539454 1088.60394993586 49.739 2 -1.582150944482603 0.4173121145903646 1.0 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1', 'ENSG00000141446|ENST00000269214|ESCO1', 'ESCO1|p.T344Nfs*4|1|0.24|ENSG00000141446|chr18:21573813-21573814|-/T|frameshift_variant'] 43139 8372 IGPRAVHV True PC9_epitope_Rep1 847.5028207229899 847.50172993586 37.039 2 -1.5822199149356337 0.4173140065668295 1.0 ['PDPR|p.D633H|1|0.3|ENSG00000090857|chr16:70146163-70146163|G/C|missense_variant'] 46753 9165 IVATTTVV True PC9_epitope_Rep2 802.48001958974 802.47892993586 40.591 2 -1.5823875581895488 0.4173140065668295 1.0 ['GRM6|p.L707Cfs*6|1|0.47|ENSG00000113262|chr5:178986135-178986135|G/-|frameshift_variant', 'ENSG00000113262|ENST00000517717|GRM6'] 112689 11253 TPGGHRCS True H1975_Epitope_Rep3 813.35517051313 813.35462496793 48.387 1 -1.5825776689892739 0.4173321130305457 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 77062 8657 NWDYRERRKFF True H1975_Epitope_Rep1 1615.8007936298293 1615.79914490379 38.228 3 -1.5827054356394419 0.417384539703241 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-6|EFCAB5'] 101442 693 SNNDDDED True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 3.8978 2 -1.5828639177989994 0.417393094927586 1.0 ['ENSG00000102387|ENST00000356784|TAF7L', 'nc|ENSG00000102387|Q5H9L4|TAF7L'] 18510 11889 EKPVTSAP True PC9_epitope_Rep5 827.4388830537499 827.43833496793 50.729 1 -1.5829227939964503 0.417393094927586 1.0 ['COL6A3|p.N2132Ifs*110|1|0.15|ENSG00000163359|chr2:237359050-237359050|C/-|frameshift_variant'] 15931 8790 EDSLDATRAAI True PC9_epitope_Rep2 1160.567331024 1160.56622993586 39.164 2 -1.582965618485117 0.417393094927586 1.0 ['nc|ENSG00000132932|Q9NTI2-1|ATP8A2', 'ENSG00000132932|ENST00000381655|ATP8A2'] 60338 19156 LIGFSERALA True PC9_epitope_Rep5 1075.6025943339098 1075.6014899358602 78.72 2 -1.5831549025562934 0.41743407881942457 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'ENST00000547491.1_1_12:112186933-112194274:+|nuORF'] 53111 20248 KSFIRKDHLRK True NCI_RA007_Epitope_Rep4 1426.8521009267 1426.85044490379 87.622 3 -1.5832914145393304 0.4174636222201885 1.0 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'nc|ENSG00000181220|Q6NUN9-3|ZNF746'] 17644 16320 EHQKKVRKM True NCI_RA007_Epitope_Rep4 1182.6655460269797 1182.66391490379 70.771 3 -1.5833413283655042 0.4174702860999577 1.0 ['ENSG00000255150|ENST00000527879|EID3'] 51863 8881 KKMLFLVKR True H1975_Epitope_Rep1 1161.74200544253 1161.7403549037901 39.072 3 -1.583345814742217 0.4174769498272667 1.0 ['ENST00000260665.11_1_2:44145453-44145528:-|nuORF'] 69741 5491 LWHTYRWLLL True PC9_epitope_Rep3 1399.7764763749499 1399.7748449037902 26.197 3 -1.5835043984476536 0.4174902768245253 1.0 ['ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF'] 117794 12096 VALVRASI True PC9_epitope_Rep3 827.52288746123 827.5217899358599 51.568 2 -1.583641780469784 0.4174902768245253 1.0 ['ENSG00000175893|ENST00000380916|ZDHHC21', 'ZDHHC21|p.V172Ffs*8|1|0.18|ENSG00000175893|chr9:14640003-14640003|C/-|frameshift_variant'] 56192 9881 LDPDLLERPDA True NCI_RA007_Epitope_Rep1 1252.62993128056 1252.62882993586 42.437 2 -1.5837947810488897 0.41750360321200614 1.0 ['ENSG00000120860|ENST00000240079|WASHC3'] 121108 7569 VGGDKPTF True PC9_epitope_Rep1 819.41266830591 819.41156993586 33.931 2 -1.583855791687419 0.41750360321200614 1.0 ['ENSG00000132003|ENST00000590508|ZSWIM4'] 83389 22900 QASQPAPTHS True H1975_Epitope_Rep1 1022.47812209678 1022.4770299358601 95.234 2 -1.5838996292973078 0.4175217048145225 1.0 ['CON__Q0VCM5'] 130881 24130 VVGWFVLFYK True PC9_epitope_Rep1 1256.6957664427598 1256.69466993586 97.629 2 -1.5839416348986612 0.4175283674963397 1.0 ['nc|ENSG00000144366|Q9UBP9-2|GULP1'] 60814 23115 LKKKKCNKF True PC9_epitope_Rep1 1135.68996986967 1135.68832490379 93.709 3 -1.5842261760240497 0.4175768874452438 1.0 ['ENST00000259605.10_1_9:36338912-36339155:-|nuORF'] 51836 20604 KKKRLEQPAEL True H1975_Epitope_Rep2 1338.7983340183398 1338.79669490379 85.348 3 -1.5843031547255997 0.4175768874452438 1.0 ['ENST00000355358.1_1_10:8093256-8094410:-|nuORF'] 80264 5143 PLDPVLRAP True NCI_RA007_Epitope_Rep3 976.5705659296399 976.56946993586 27.222 2 -1.584308765142675 0.4175768874452438 1.0 ['ENSG00000157637|ENST00000374759|SLC38A10'] 83537 11631 QDLPEERGV True PC9_epitope_Rep3 1041.50908787189 1041.50798993586 49.755 2 -1.5843318282617624 0.4175768874452438 1.0 ['ENST00000418618.1_1:31971908-31973444:+|nuORF'] 123433 12902 VIEERRNQSLS True H1975_Epitope_Rep1 1329.70007652905 1329.69896993586 54.7 2 -1.5843949312077341 0.4175768874452438 1.0 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'nc|ENSG00000084234|Q06481-6|APLP2'] 14741 16376 DVVKVLSKTTE True H1975_Epitope_Rep1 1217.68671788069 1217.68562993586 68.348 2 -1.5845207891626012 0.4175768874452438 1.0 ['ENSG00000214193|ENST00000453908|SH3D21', 'nc|ENSG00000214193|A4FU49-5|SH3D21', 'nc|ENSG00000214193|A4FU49|SH3D21', 'nc|ENSG00000214193|A4FU49-3|SH3D21'] 31134 13923 GCRDGGDSS True NCI_RA007_Epitope_Rep5 852.30319450992 852.30208993586 60.239 2 -1.5845233850833604 0.4175768874452438 1.0 ['ENST00000353159.6_2_9:33461728-33461932:-|nuORF'] 56043 20143 LDKQRFRGMLW True NCI_RA007_Epitope_Rep5 1448.7710737246798 1448.7694349037902 84.427 3 -1.5845586271489407 0.4175768874452438 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 138201 2430 YQRLVPESCPV True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 13.013 3 -1.5845700895289858 0.4175768874452438 1.0 ['ENSG00000128710|ENST00000249501|HOXD10'] 22332 24279 ETEHLLHD True PC9_epitope_Rep4 992.45632402304 992.45522993586 101.87 2 -1.5846828953660184 0.41759498593224603 1.0 ['MTRF1L|p.R79P|1|0.24|ENSG00000112031|chr6:153002450-153002450|C/G|missense_variant', 'ENST00000482526.1_1_6:153319663-153323652:-|nuORF', 'nc|ENSG00000112031|Q9UGC7-4|MTRF1L', 'nc|ENSG00000112031|Q9UGC7-2|MTRF1L', 'ENST00000504731.1_1_4:189659580-189660645:+|nuORF', 'ENSG00000112031|ENST00000367233|MTRF1L'] 89230 7244 REIVELLEKEI True NCI_RA007_Epitope_Rep4 1369.7816808946898 1369.7800349037902 34.498 3 -1.5848846019203116 0.41759687085411046 1.0 ['CEP135|p.R924I|1|0.12|ENSG00000174799|chr4:56011954-56011954|G/T|missense_variant'] 95948 5393 SDYSFSVIAMS True PC9_epitope_Rep3 1205.52744035797 1205.52634993586 25.817 2 -1.5848890665921618 0.41759687085411046 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 58760 21467 LFLRRRLMF True PC9_epitope_Rep6 1250.7434024248598 1250.74174490379 95.449 3 -1.5849085253917883 0.4176035316856708 1.0 ['ENSG00000171714|ENST00000324559|ANO5', 'ANO5|p.L845*|1|0.27|ENSG00000171714|chr11:22279553-22279553|T/-|frameshift_variant'] 134989 23793 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 98.876 2 -1.5850404527993438 0.4176216290400055 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 61872 20929 LLLEQYPTR True PC9_epitope_Rep4 1131.62880908175 1131.6277099358601 88.663 2 -1.5850819330033281 0.417628289436064 1.0 ['ENSG00000138382|ENST00000260953|METTL5', 'ENST00000471560.1_1_2:170680960-170681107:-|nuORF'] 75051 3215 NMEPFYFI True PC9_epitope_Rep3 1059.47355431031 1059.4724499358601 17.398 2 -1.585148016783617 0.4176463860933211 1.0 ['ENST00000552077.5_1_12:113664633-113726187:+|nuORF', 'ENSG00000186815|ENST00000335509|TPCN1', 'nc|ENSG00000186815|Q9ULQ1-3|TPCN1', 'ENST00000428632.7_1_12:113682520-113726187:+|nuORF', 'ENST00000550543.1_1_12:113722432-113724900:+|nuORF', 'nc|ENSG00000186815|Q9ULQ1-2|TPCN1'] 139777 9960 YVDCYGNLAP True PC9_epitope_Rep5 1113.4800962427298 1113.47898993586 43.286 2 -1.585262158451398 0.4176682486134142 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant', 'nc|ENSG00000151150|Q12955-5|ANK3', 'nc|ENSG00000151150|Q12955-4|ANK3', 'nc|ENSG00000151150|Q12955-6|ANK3', 'nc|ENSG00000151150|Q12955-7|ANK3', 'ENST00000508449.1_1_10:61842291-61844452:-|nuORF'] 99957 14265 SLIMDSPRA True PC9_epitope_Rep5 988.5011660404799 988.50006993586 59.874 2 -1.5853272713645539 0.4176682486134142 1.0 ['nc|ENSG00000188747|Q86UR1-2|NOXA1', 'ENSG00000188747|ENST00000683555|NOXA1', 'nc|ENSG00000188747|Q86UR1-3|NOXA1'] 69293 16288 LVPKAITS True NCI_RA007_Epitope_Rep5 827.51165407119 827.51054993586 69.408 2 -1.5853991965998084 0.4176682486134142 1.0 ['ENST00000467766.5_1_3:23853000-23929107:+|nuORF'] 110622 11071 TITNARFVSP True PC9_epitope_Rep1 1104.5927579262 1104.5916699358602 47.473 2 -1.585629021039681 0.4176682486134142 1.0 ['ENST00000435880.6_1_2:70189834-70190005:-|nuORF'] 2562 8592 AERMVSMAWL True H1975_Epitope_Rep2 1192.5732854349199 1192.57218993586 38.003 2 -1.5856351097623442 0.4176682486134142 1.0 ['ENST00000446420.2_1_9:96233459-96233558:+|nuORF'] 84242 16573 QEVKGVKR True NCI_RA007_Epitope_Rep3 942.5610638750998 942.55996993586 72.977 2 -1.585843000310696 0.4176749079431878 1.0 ['ENSG00000196872|ENST00000397899|CRACDL'] 111656 12171 TLPASRCSL True PC9_epitope_Rep5 946.49060135678 946.48950993586 51.805 2 -1.5863122570603607 0.4177616156071678 1.0 ['ENST00000469694.5_1_2:241381745-241403123:+|nuORF'] 121032 10535 VGFFPFLLLF True PC9_epitope_Rep4 1198.6790537494596 1198.67740490379 48.25 3 -1.5865959994368928 0.41779099016693344 1.0 ['ENST00000233813.4_1_2:217560055-217560226:-|nuORF'] 139115 7884 YSPSEAALKN True H1975_Epitope_Rep1 1078.5294889632999 1078.52838993586 35.278 2 -1.5867522190730292 0.41779099016693344 1.0 ['ENSG00000176945|ENST00000447234|MUC20', 'nc|ENSG00000176945|Q8N307-3|MUC20'] 87254 23522 QSRLQQVVP True PC9_epitope_Rep3 1053.5930922793698 1053.59198993586 95.758 2 -1.5867932387147665 0.41779099016693344 1.0 ['ENST00000471850.1_1_3:119298548-119305161:+|nuORF'] 58997 15545 LGAKKLCP True PC9_epitope_Rep6 828.4891448047999 828.48804993586 71.987 2 -1.5869548100965238 0.41779099016693344 1.0 ['ENST00000475378.5_1_1:45097966-45116444:+|nuORF', 'nc|ENSG00000187147|Q5VTB9-3|RNF220', 'ENSG00000187147|ENST00000361799|RNF220'] 92258 18922 RQKTRPLIPE True H1975_Epitope_Rep2 1236.7302544585198 1236.72859490379 78.552 3 -1.5869769599073862 0.41779099016693344 1.0 ['ENST00000589104.5_1_19:5070919-5151519:+|nuORF', 'nc|ENSG00000127663|O94953|KDM4B', 'ENSG00000127663|ENST00000159111|KDM4B'] 23426 12704 EVVRYEEEPGL True H1975_Epitope_Rep1 1318.6404959642596 1318.6393899358602 53.922 2 -1.5871182624476226 0.41779099016693344 1.0 ['ENSG00000118898|ENST00000345988|PPL'] 40193 16330 HRFWYNYRQRK True NCI_RA007_Epitope_Rep1 1652.84366150132 1652.8425699358602 67.632 2 -1.5871200191048829 0.41779099016693344 1.0 ['nc|ENSG00000171509|Q9HBX9-4|RXFP1', 'nc|ENSG00000171509|Q9HBX9-2|RXFP1', 'ENSG00000171509|ENST00000307765|RXFP1', 'nc|ENSG00000171509|Q9HBX9-5|RXFP1'] 97419 24888 SGGGDMGP True H1975_Epitope_Rep3 676.24863975592 676.24809496793 103.53 1 -1.5871760355132973 0.41779099016693344 1.0 ['ENST00000282388.3_2_2:43451217-43451442:-|nuORF'] 73455 4868 NEVDLLGPNQ True NCI_RA007_Epitope_Rep1 1097.53530261973 1097.5342099358602 23.015 2 -1.5871883033297614 0.41779099016693344 1.0 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 34065 18502 GNRLRAELGR True NCI_RA007_Epitope_Rep4 1140.64758746372 1140.64648993586 80.081 2 -1.5872194263565522 0.41779099016693344 1.0 ['ENSG00000176155|ENST00000694881|CCDC57'] 120836 19466 VGDMYPVYQP True PC9_epitope_Rep2 1167.52704643515 1167.5259499358601 80.257 2 -1.5872308742295436 0.41779099016693344 1.0 ['ENST00000605113.1_1_17:57962763-57962907:+|nuORF'] 40228 534 HRHHLAFLEM True H1975_Epitope_Rep1 1289.6451449355698 1289.64349490379 2.7971 3 -1.5872406153964276 0.41779099016693344 1.0 ['SCAF4|p.P250Hfs*96|1|0.27|ENSG00000156304|chr21:31701023-31701023|G/-|frameshift_variant'] 95949 4312 SDYSFSVIAMS True PC9_epitope_Rep4 1205.52744035797 1205.52634993586 23.005 2 -1.587266604794142 0.41779099016693344 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 58740 14363 LFLLHYSL True PC9_epitope_Rep4 1004.5695033004802 1004.56840993586 63.154 2 -1.587517360072217 0.4178548152891003 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|357|3|anti-sense'] 136537 22578 YHRRVHTG True PC9_epitope_Rep5 1024.5314950823197 1024.53038993586 91.846 2 -1.5875357085411927 0.4178614712675219 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 121162 14252 VGGHTSLA True NCI_RA007_Epitope_Rep5 740.3817025308 740.38115496793 61.513 1 -1.587638710381992 0.4178795604998685 1.0 ['ENSG00000183655|ENST00000337975|KLHL25'] 58990 15883 LGAGGVKG True H1975_Epitope_Rep1 657.38097425481 657.38042496793 66.405 1 -1.5876714917341506 0.41788621604317205 1.0 ['ENST00000341307.6_1_11:63448974-63449103:+|nuORF'] 60780 23411 LKFKNNNR True NCI_RA007_Epitope_Rep4 1032.58286194884 1032.5817699358602 101.62 2 -1.5877081979820438 0.41790430457897443 1.0 ['ENST00000485752.1_1_2:101888144-101889379:-|nuORF'] 92973 19484 RRQHLQVHR True NCI_RA007_Epitope_Rep5 1228.7013543720798 1228.70024993586 81.831 2 -1.58776681447732 0.4179109596871927 1.0 ['nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25', 'ENSG00000197037|ENST00000394152|ZSCAN25', 'nc|ENSG00000197037|Q6NSZ9-3|ZSCAN25'] 32390 20688 GGGARKGG True PC9_epitope_Rep2 658.3510711088599 658.35052496793 85.012 1 -1.587903094784437 0.4179309240988236 1.0 ['MYH2|p.K640R|1|0.36|ENSG00000125414|chr17:10536585-10536585|T/C|missense_variant'] 128634 19114 VSLGPDSPV True PC9_epitope_Rep4 869.44944773745 869.44834993586 81.613 2 -1.5879122720261778 0.4179309240988236 1.0 ['ENST00000391975.5_1_2:242168452-242168623:-|nuORF'] 80625 23757 PLPLIKVMLLI True NCI_RA007_Epitope_Rep4 1248.82433808416 1248.82270490379 103.0 3 -1.5879389319245711 0.4179309240988236 1.0 ['ENST00000555357.1_1_12:56361683-56362031:+|nuORF'] 20042 5695 ENAPTIHV True PC9_epitope_Rep2 879.44503106335 879.44392993586 27.292 2 -1.5880588999511611 0.4179375785983766 1.0 ['FAT3|p.H262N|1|0.37|ENSG00000165323|chr11:92352896-92352896|C/A|missense_variant'] 140204 4490 YWAMTALYL True PC9_epitope_Rep2 1130.5470536037399 1130.54539490379 22.628 3 -1.5881930158862747 0.41796709766665524 1.0 ['nc|ENSG00000204385|Q53GD3-3|SLC44A4', 'nc|ENSG00000204385|Q53GD3-4|SLC44A4', 'ENSG00000204385|ENST00000229729|SLC44A4'] 16507 5908 EENIIDNP True H1975_Epitope_Rep3 942.42944056886 942.4288949679301 27.735 1 -1.5883811022479981 0.41799661605999633 1.0 ['ENSG00000137413|ENST00000372977|TAF8', 'nc|ENSG00000137413|Q7Z7C8-2|TAF8'] 22871 10802 EVERVRRSERY True H1975_Epitope_Rep1 1477.7749728048097 1477.7738699358601 46.513 2 -1.5884137354649117 0.4179991542180517 1.0 ['ENSG00000122678|ENST00000242248|POLM', 'nc|ENSG00000122678|Q9NP87-2|POLM', 'ENST00000492321.5_1_7:44118242-44122109:-|nuORF'] 110556 9539 TIRTTTSPFF True NCI_RA007_Epitope_Rep1 1169.6080736371698 1169.6069699358602 41.102 2 -1.5884860545745845 0.4179991542180517 1.0 ['ENSG00000151612|ENST00000508784|ZNF827', 'nc|ENSG00000151612|Q17R98-2|ZNF827', 'nc|ENSG00000151612|Q17R98-3|ZNF827'] 104599 8561 SSTGRHKAFY True NCI_RA007_Epitope_Rep1 1152.5676058075198 1152.56650993586 37.302 2 -1.5885578581689854 0.4179991542180517 1.0 ['OR11H1|p.S243Y|2|0.37|ENSG00000130538|chr22:15528919-15528919|C/A|missense_variant'] 66941 13872 LSYLLYYPRIN True H1975_Epitope_Rep1 1413.76563690773 1413.76452993586 58.507 2 -1.588600195469072 0.4179991542180517 1.0 ['nc|ENSG00000079931|Q6UVY6-2|MOXD1', 'ENSG00000079931|ENST00000367963|MOXD1'] 4359 22772 AIPSIMNVLL True PC9_epitope_Rep2 1069.62055289717 1069.61944993586 93.081 2 -1.588670239493495 0.4179991542180517 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'ENSG00000185313|ENST00000449082|SCN10A'] 65212 14095 LSEAHAAC True NCI_RA007_Epitope_Rep5 800.34868815036 800.34758993586 60.906 2 -1.588810267215944 0.4179991542180517 1.0 ['ENSG00000132702|ENST00000255039|HAPLN2'] 115505 6959 TVGKAPHK True PC9_epitope_Rep3 836.48683630568 836.48572993586 31.779 2 -1.588811353822096 0.4179991542180517 1.0 ['C1QTNF4|p.A82V|1|0.19|ENSG00000172247|chr11:47590566-47590566|G/A|missense_variant'] 134438 26672 WTHGAQGG True H1975_Epitope_Rep3 812.3565504121198 812.35544993586 111.38 2 -1.5888356664552206 0.4179991542180517 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 100523 13469 SLPSGSHQGP True PC9_epitope_Rep5 965.45665837621 965.45556993586 56.826 2 -1.588897381164367 0.4179991542180517 1.0 ['nc|ENSG00000197965|O95297-2|MPZL1', 'ENST00000474729.5_1_1:167734818-167757155:+|nuORF', 'ENSG00000197965|ENST00000359523|MPZL1', 'nc|ENSG00000197965|O95297-4|MPZL1'] 3595 17015 AGPHPRQPAF True PC9_epitope_Rep5 1076.55156182056 1076.55046993586 70.467 2 -1.588921271292071 0.4179991542180517 1.0 ['nc|ENSG00000168061|A6NKF1-2|SAC3D1', 'ENST00000530213.5_1_11:64808530-64811777:+|nuORF', 'ENSG00000168061|ENST00000652489|SAC3D1', 'nc|ENSG00000168061|A6NKF1|SAC3D1'] 13825 7291 DQVVVDNVFPN True H1975_Epitope_Rep3 1244.6037165327198 1244.60260993586 33.019 2 -1.5889793446642024 0.4179991542180517 1.0 ['nc|ENSG00000136104|Q5TBB1-2|RNASEH2B', 'ENST00000495244.6_1_13:51502574-51530607:+|nuORF', 'ENSG00000136104|ENST00000336617|RNASEH2B'] 28223 20377 FRRLIALNHR True NCI_RA007_Epitope_Rep1 1294.7734566831798 1294.77181490379 83.475 3 -1.5890240063398897 0.4179991542180517 1.0 ['ENST00000393966.1_1_16:67314567-67316137:+|nuORF'] 83264 5236 QAEHRRWEHWW True H1975_Epitope_Rep1 1619.7494267633099 1619.74832993586 25.203 2 -1.5890546884241254 0.4179991542180517 1.0 ['ENST00000398117.1_1_18:60791148-60791340:-|nuORF'] 57616 11346 LELQFPRTP True H1975_Epitope_Rep2 1099.60259433391 1099.6014899358602 48.691 2 -1.5891034759464338 0.4179991542180517 1.0 ['ENSG00000132688|ENST00000368223|NES'] 21737 20799 ESASELHK True H1975_Epitope_Rep3 899.4348603024699 899.43431496793 86.891 1 -1.5891276549007132 0.4179991542180517 1.0 ['nc|ENSG00000131778|Q86WJ1-4|CHD1L', 'ENSG00000131778|ENST00000369258|CHD1L', 'nc|ENSG00000131778|Q86WJ1-2|CHD1L'] 48020 23392 KAKSNVDLRRS True PC9_epitope_Rep5 1272.7262317072398 1272.7251299358602 94.96 2 -1.589147404907275 0.4179991542180517 1.0 ['ENSG00000130037|ENST00000252321|KCNA5', 'nc|ENSG00000130037|P22460-2|KCNA5'] 103098 23647 SQLLLPLPAC True PC9_epitope_Rep1 1053.58925276889 1053.5881499358602 95.747 2 -1.5891668736972495 0.4179991542180517 1.0 ['ENST00000519574.1_1_2:219125758-219128073:+|nuORF'] 85213 19148 QKHWLFKHLF True NCI_RA007_Epitope_Rep3 1382.76116066398 1382.7600699358602 83.621 2 -1.5891969124947274 0.4179991542180517 1.0 ['TG|p.V2411Gfs*5|1|0.24|ENSG00000042832|chr8:133030004-133030005|-/CCGGAGAG|frameshift_variant', 'nc|ENSG00000042832|P01266-2|TG', 'ENSG00000042832|ENST00000220616|TG'] 15783 14572 EDFNLIVNW True H1975_Epitope_Rep3 1148.55022440788 1148.54912993586 61.418 2 -1.589222237795 0.4179991542180517 1.0 ['ENSG00000163012|ENST00000295131|ZSWIM2'] 37276 7719 GVVMGMII True PC9_epitope_Rep2 818.4394177310598 818.43832993586 35.068 2 -1.589225283349961 0.4179991542180517 1.0 ['BTNL3|p.S401Afs*7|1|0.3|ENSG00000168903|chr5:181005665-181005665|C/-|frameshift_variant', 'nc|ENSG00000168903|Q6UXE8-2|BTNL3', 'ENSG00000168903|ENST00000342868|BTNL3'] 18582 9332 ELAASQRAV True PC9_epitope_Rep1 943.50869394907 943.50758993586 40.752 2 -1.5892269141641502 0.4179991542180517 1.0 ['nc|ENSG00000164591|Q8TDC0-3|MYOZ3'] 88085 18549 QVVKSIKI True PC9_epitope_Rep2 913.5960524014898 913.59494993586 76.699 2 -1.5892978759631944 0.418 1.0 ['ENST00000531771.5_1_11:85718509-85733504:-|nuORF'] 61748 24250 LLIVLIPWKKI True PC9_epitope_Rep4 1334.9053652861796 1334.9042699358602 101.75 2 -1.5893718508413628 0.418 1.0 ['ENSG00000188211|ENST00000338965|NCR3LG1'] 85631 6511 QLPPGSGP True PC9_epitope_Rep6 751.38645355807 751.38534993586 33.712 2 -1.5893728005814924 0.418 1.0 ['ENST00000463814.1_1_7:143815556-143816108:-|nuORF'] 10966 5373 DCHGNLDEAV True H1975_Epitope_Rep2 1071.42912329903 1071.4280299358602 25.707 2 -1.5893806910506352 0.418 1.0 ['RNF31|p.R561C|1|0.26|ENSG00000092098|chr14:24151323-24151323|C/T|missense_variant'] 9501 22165 AWEHLVYWRLR True NCI_RA007_Epitope_Rep4 1527.8099017615498 1527.8088099358602 96.131 2 -1.5894304856293207 0.418 1.0 ['ENSG00000105464|ENST00000263269|GRIN2D'] 53976 8854 KYKSSLLNRY True H1975_Epitope_Rep1 1270.70337100434 1270.7022699358602 38.98 2 -1.5894485565722236 0.418 1.0 ['ENSG00000150051|ENST00000419761|MKX'] 96016 21552 SEALCGVP True H1975_Epitope_Rep3 774.3581902049 774.35764496793 90.058 1 -1.589486165246926 0.418 1.0 ['ENST00000609537.5_1_20:62333085-62338084:-|nuORF', 'nc|ENSG00000101246|Q13795-3|ARFRP1', 'nc|ENSG00000101246|Q13795-2|ARFRP1', 'ENSG00000101246|ENST00000622789|ARFRP1'] 127003 21670 VPWQPPGP True NCI_RA007_Epitope_Rep5 876.4493881677998 876.44828993586 90.452 2 -1.58965642149514 0.418006651352556 1.0 ['ENSG00000260734|ENST00000561754|TLE7'] 44187 17239 ILRIPSAQGRQ True NCI_RA007_Epitope_Rep5 1237.72550343125 1237.7244099358602 73.083 2 -1.5898230149588228 0.4180313817811961 1.0 ['ENSG00000197532|ENST00000641622|OR6Y1'] 12395 6470 DKEHIYDEQPP True H1975_Epitope_Rep2 1369.6150094924099 1369.6139099358602 29.803 2 -1.5899817079652292 0.4180313817811961 1.0 ['nc|ENSG00000197822|Q16625-3|OCLN', 'ENSG00000197822|ENST00000396442|OCLN', 'nc|ENSG00000197822|Q16625-4|OCLN'] 58797 16028 LFPVPPGV True PC9_epitope_Rep5 824.4796256669199 824.47852993586 66.64 2 -1.5902384485415026 0.4180399058350285 1.0 ['ENST00000357681.9_1_1:203711927-203711975:+|nuORF'] 76373 4215 NSHWFWLKWVI True NCI_RA007_Epitope_Rep4 1514.78229003138 1514.78065490379 22.526 3 -1.590243642258052 0.4180399058350285 1.0 ['nc|ENSG00000197506|Q9HAS3-2|SLC28A3', 'ENSG00000197506|ENST00000376238|SLC28A3'] 17100 8469 EGRRRPRRRR True NCI_RA007_Epitope_Rep3 1393.8351625062899 1393.83352490379 40.392 3 -1.5903088004498742 0.4180399058350285 1.0 ['ENST00000378308.6_2_X:40944993-40945185:+|nuORF'] 16276 8385 EEIHAFRQLE True NCI_RA007_Epitope_Rep2 1270.6305999868998 1270.6295099358601 37.256 2 -1.590475368094157 0.41804655627549797 1.0 ['nc|ENSG00000293505|Q96P88|GNRHR2'] 36738 7466 GVNRFYDN True NCI_RA007_Epitope_Rep4 983.4460936925099 983.44498993586 35.363 2 -1.5905688724278393 0.4180712840964929 1.0 ['ENSG00000157103|ENST00000287766|SLC6A1'] 18520 10597 EKQQRGRRWRK True H1975_Epitope_Rep1 1526.8654595750597 1526.8643699358602 45.715 2 -1.5905704745128255 0.4180712840964929 1.0 ['ENST00000577284.1_1_18:9856263-9859319:+|nuORF'] 95116 23759 RYVKIKMR True PC9_epitope_Rep1 1092.6590040945598 1092.65790993586 96.184 2 -1.5906008342094613 0.41807793395040566 1.0 ['ENST00000514355.5_1_3:129112485-129117890:-|nuORF'] 63634 11667 LPNLDLLNRF True PC9_epitope_Rep1 1213.68190728377 1213.68025490379 49.754 3 -1.590745323366481 0.41808458365234086 1.0 ['GPAA1|p.L254R|2|0.23|ENSG00000197858|chr8:144084278-144084278|T/G|missense_variant'] 112152 13541 TLVFYRGQMD True PC9_epitope_Rep4 1228.5910436740398 1228.5899499358602 59.981 2 -1.5909262446489745 0.41810930947402103 1.0 ['nc|ENSG00000143442|Q7Z3K3-7|POGZ', 'nc|ENSG00000143442|Q7Z3K3-2|POGZ', 'nc|ENSG00000143442|Q7Z3K3-3|POGZ', 'nc|ENSG00000143442|Q7Z3K3-6|POGZ', 'ENSG00000143442|ENST00000271715|POGZ', 'nc|ENSG00000143442|Q7Z3K3-5|POGZ'] 12884 23863 DLLPLSLIPV True PC9_epitope_Rep3 1078.66379760814 1078.6627099358602 97.076 2 -1.5909335824920487 0.41810930947402103 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2', 'PAN2|p.R449Qfs*16|1|0.09|ENSG00000135473|chr12:56326327-56326328|-/G|frameshift_variant'] 62308 19027 LLQSLRSGPP True NCI_RA007_Epitope_Rep5 1066.61349337078 1066.6129749679299 80.044 1 -1.590958631851653 0.4181159585894828 1.0 ['nc|ENSG00000088247|Q92945|KHSRP', 'ENSG00000088247|ENST00000600480|KHSRP'] 18254 10424 EISPRSGL True PC9_epitope_Rep5 857.46068112749 857.45958993586 45.082 2 -1.5911648297496659 0.41815688739073303 1.0 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF', 'GARS1|p.R331G|1|0.31|ENSG00000106105|chr7:30612205-30612205|A/G|missense_variant'] 87290 13628 QSTFARHHRLH True NCI_RA007_Epitope_Rep2 1388.71739835904 1388.7163099358602 57.65 2 -1.5914157404882776 0.41820633233926346 1.0 ['ZNF28|p.L454F|1|0.23|ENSG00000198538|chr19:52800485-52800485|G/A|missense_variant'] 20887 20783 EQSLLSRWNPW True H1975_Epitope_Rep2 1414.69934825306 1414.69824993586 86.055 2 -1.591478633767891 0.41820633233926346 1.0 ['TP63-TPRG1|2|fusion', 'TP63-TPRG1|3|fusion', 'TP63-TPRG1|4|fusion', 'ENSG00000188001|ENST00000345063|TPRG1'] 38050 20334 HELHLYKHEQI True H1975_Epitope_Rep3 1445.74154741821 1445.7404499358602 85.026 2 -1.591502961722662 0.41820633233926346 1.0 ['ENST00000557001.5_1_14:52037074-52042621:+|nuORF', 'ENST00000557103.5_1_14:52042417-52042621:+|nuORF'] 108042 16322 TDFCMSKWEE True NCI_RA007_Epitope_Rep5 1274.4947603306998 1274.49310490379 69.537 3 -1.5915126843305114 0.41820633233926346 1.0 ['nc|ENSG00000171044|Q5GH73-2|XKR6', 'ENSG00000171044|ENST00000416569|XKR6', 'ENSG00000260903|ENST00000562532|XKR7'] 85469 19680 QLHFNQCL True PC9_epitope_Rep2 1001.4752856458099 1001.47418993586 81.086 2 -1.5916439706103223 0.41822149606389175 1.0 ['ENSG00000138821|ENST00000356736|SLC39A8', 'nc|ENSG00000138821|Q9C0K1-3|SLC39A8'] 73081 8516 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 37.711 1 -1.5917070268882711 0.41822149606389175 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 30721 15011 GALVARPLWH True PC9_epitope_Rep4 1118.6348975217 1118.6338099358602 65.678 2 -1.5917182163557648 0.41822149606389175 1.0 ['ENST00000579053.5_1_18:691132-706776:-|nuORF'] 126973 4361 VPVTGGGG True H1975_Epitope_Rep1 642.3336897092199 642.33314496793 21.766 1 -1.5917229828501744 0.41822149606389175 1.0 ['ENST00000522243.5_1_8:59465814-59465859:+|nuORF'] 57983 4227 LEQSMREEA True H1975_Epitope_Rep1 1091.49172355559 1091.4906299358602 21.221 2 -1.5918222125322756 0.4182509940130707 1.0 ['nc|ENSG00000291004|A6NC78|GOLGA8IP', 'ENSG00000179938|ENST00000567927|GOLGA8J', 'ENSG00000188626|ENST00000563027|GOLGA8M', 'ENSG00000249931|ENST00000512626|GOLGA8K', 'ENSG00000261794|ENST00000566740|GOLGA8H', 'nc|ENSG00000261480|H3BSY2-2|GOLGA8M'] 127279 26006 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 105.61 2 -1.5919498699505048 0.4182775797459099 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 73669 20785 NGLTRHRR True PC9_epitope_Rep6 1008.5689432202 1008.56784993586 92.716 2 -1.5919986144366225 0.4182775797459099 1.0 ['nc|ENSG00000235109|Q96LW9-2|ZSCAN31', 'ENSG00000235109|ENST00000344279|ZSCAN31'] 62360 20866 LLRNKKRKA True PC9_epitope_Rep3 1125.74584495301 1125.74474993586 85.533 2 -1.5920560810578894 0.4182775797459099 1.0 ['nc|ENSG00000102312|Q9H237-2|PORCN', 'ENSG00000102312|ENST00000326194|PORCN'] 71478 27373 MKKIMKKRKF True PC9_epitope_Rep1 1336.8199384933998 1336.81884993586 111.89 2 -1.5920578588726717 0.4182775797459099 1.0 ['ENSG00000206536|ENST00000383695|OR5K3'] 35873 14102 GVAEETDNLQK True PC9_epitope_Rep5 1202.5778957076998 1202.5762649037902 59.255 3 -1.592131195444507 0.41829565058437773 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF'] 42509 22412 IERMKQKEWWQ True PC9_epitope_Rep5 1560.78711771164 1560.7860299358601 91.209 2 -1.5922172728350934 0.41830229635553523 1.0 ['CCDC38|p.R493W|1|0.54|ENSG00000165972|chr12:95872262-95872262|G/A|missense_variant'] 41188 19829 IAADWMTDLK True PC9_epitope_Rep5 1162.5692456003 1162.5681499358602 81.318 2 -1.5922828809274108 0.41832036649872617 1.0 ['nc|ENSG00000109572|P51790-2|CLCN3', 'nc|ENSG00000109572|P51790-4|CLCN3', 'nc|ENSG00000109572|P51790-5|CLCN3', 'ENSG00000109572|ENST00000513761|CLCN3'] 71693 11175 MLYFCAGW True H1975_Epitope_Rep3 989.4139312592098 989.41282993586 48.083 2 -1.5926306799701522 0.41838413380249506 1.0 ['L1PBa1_dup38|chr2:78541257-78543178:+|1.977028700736093|0.14023199016772|3.82|449.0|94|2|anti-sense'] 64730 22823 LRQRHQHQR True PC9_epitope_Rep6 1257.6915179643702 1257.69042993586 100.88 2 -1.5927448427425392 0.4183907783350279 1.0 ['ENSG00000112309|ENST00000230053|B3GAT2'] 32472 24775 GGKAALAPA True PC9_epitope_Rep2 754.43373810366 754.43264993586 100.98 2 -1.5929143071271217 0.4184316951127562 1.0 ['ENSG00000180929|ENST00000322241|GPR62'] 45893 10607 ISRDAFLK True PC9_epitope_Rep5 948.53926580136 948.53816993586 45.788 2 -1.5929827895996371 0.41844976295196207 1.0 ['nc|ENSG00000117174|Q9NWK9-2|ZNHIT6', 'ENSG00000117174|ENST00000370574|ZNHIT6'] 32202 17788 GFFGGFLLGM True PC9_epitope_Rep6 1044.5102741721998 1044.5091699358602 81.056 2 -1.593140755709708 0.41849067812100166 1.0 ['ENST00000471528.1_1_X:154275627-154282944:+|nuORF', 'ENST00000456179.1_1_X:154261825-154282944:+|nuORF', 'ENST00000331369.5_1_2:84517942-84518395:+|nuORF', 'ENST00000484175.5_1_X:154255538-154282944:+|nuORF', 'ENSG00000165775|ENST00000369498|FUNDC2'] 25676 7770 FFFFFEDFVWL True PC9_epitope_Rep2 1542.72237511342 1542.72073490379 35.261 3 -1.5932761803498448 0.4185201686144145 1.0 ['ENST00000306336.5_2_2:85835764-85835920:-|nuORF'] 29971 20357 FYDGIKAILQ True PC9_epitope_Rep3 1166.6335601090198 1166.6324699358602 83.552 2 -1.5933106174700946 0.4185382348237337 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B'] 35601 7747 GTLDINGVIP True PC9_epitope_Rep2 997.54441075145 997.54330993586 35.174 2 -1.593450021914589 0.4185552407932011 1.0 ['LRRN3|p.T487I|1|0.14|ENSG00000173114|chr7:111124232-111124232|C/T|missense_variant'] 42862 21074 IFQKRRYKHDH True PC9_epitope_Rep2 1526.8218634275802 1526.8207699358602 86.518 2 -1.5934744828068872 0.4185552407932011 1.0 ['nc|ENSG00000205838|Q6PF05-3|TTC23L'] 357 8406 AAKRNCIHHIL True NCI_RA007_Epitope_Rep3 1274.70299416486 1274.7018899358602 40.157 2 -1.593480140827876 0.4185552407932011 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-5|RREB1', 'nc|ENSG00000124782|Q92766|RREB1'] 69018 5733 LVHKLIFQYVE True H1975_Epitope_Rep1 1387.7863723523099 1387.78471490379 27.12 3 -1.5934848577759126 0.4185552407932011 1.0 ['ENSG00000137812|ENST00000399668|KNL1', 'nc|ENSG00000137812|Q8NG31|KNL1'] 128851 10300 VSSLNEVKI True PC9_epitope_Rep4 987.56006081559 987.55896993586 47.306 2 -1.5935273893905197 0.4185552407932011 1.0 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10', 'ENST00000473087.1_1_2:10822102-10830002:-|nuORF'] 38047 20355 HELHLYKHEQI True H1975_Epitope_Rep1 1445.74154741821 1445.7404499358602 84.661 2 -1.5935428724165144 0.4185552407932011 1.0 ['ENST00000557001.5_1_14:52037074-52042621:+|nuORF', 'ENST00000557103.5_1_14:52042417-52042621:+|nuORF'] 62354 23515 LLRLHRTE True NCI_RA007_Epitope_Rep3 1036.61416207712 1036.61306993586 102.03 2 -1.5937066606609485 0.4185913691088114 1.0 ['ENSG00000160224|ENST00000291582|AIRE', 'AIRE|p.A142Rfs*5|1|0.3|ENSG00000160224|chr21:44287092-44287092|C/-|frameshift_variant'] 137912 24720 YPPPPLLL True PC9_epitope_Rep2 908.53714054304 908.53604993586 100.76 2 -1.5937528427790124 0.4185913691088114 1.0 ['ENST00000430792.1_1_21:38444859-38445147:-|nuORF'] 139019 23015 YSHGITLV True NCI_RA007_Epitope_Rep3 888.4705175352 888.46942993586 100.04 2 -1.5937970460579967 0.4186094326476064 1.0 ['ENSG00000120645|ENST00000538872|IQSEC3', 'nc|ENSG00000120645|Q9UPP2-2|IQSEC3'] 71751 20905 MMMMMMMMI True NCI_RA007_Epitope_Rep3 1179.41850796475 1179.41686490379 91.017 3 -1.5938364374767628 0.41861607346826885 1.0 ['ENST00000429734.1_1_10:97949420-97949504:-|nuORF'] 5521 17081 ANDNSPFVLYL True NCI_RA007_Epitope_Rep1 1251.6135529404298 1251.61244993586 70.572 2 -1.5938680667325544 0.418622714137226 1.0 ['PCDHB11|p.P564L|2|0.27|ENSG00000197479|chr5:141201465-141201465|C/T|missense_variant'] 122513 7916 VGSSPHLP True NCI_RA007_Epitope_Rep3 792.41300265908 792.41190993586 38.248 2 -1.593874491667051 0.41862935465448314 1.0 ['ZBED4|p.F1004Cfs*23|1|0.09|ENSG00000100426|chr22:49886671-49886680|CTTCGCCACG/-|frameshift_variant', 'ZBED4|p.S1127Kfs*14|1|0.22|ENSG00000100426|chr22:49887033-49887034|-/C|frameshift_variant', 'ZBED4|p.H1096Lfs*3|2|0.34|ENSG00000100426|chr22:49886949-49886951|ACA/T|frameshift_variant', 'ENSG00000100426|ENST00000216268|ZBED4'] 117388 10842 VADATAIKQHV True H1975_Epitope_Rep1 1151.62987171091 1151.6287699358602 46.665 2 -1.5938933123604586 0.41864263523391815 1.0 ['nc|ENSG00000172421|Q8N7B9-2|EFCAB3', 'ENSG00000172421|ENST00000305286|EFCAB3'] 18104 18067 EILEPPKKRT True H1975_Epitope_Rep3 1209.70812203161 1209.70648490379 75.691 3 -1.59390483515193 0.41864263523391815 1.0 ['ENST00000572240.5_1_16:3078109-3079857:-|nuORF', 'nc|ENSG00000162069|A1A5D9-2|BICDL2', 'ENSG00000162069|ENST00000572449|BICDL2'] 112212 15851 TLWEKRTAI True PC9_epitope_Rep4 1116.62914343492 1116.6280499358602 68.896 2 -1.5939513067898035 0.41864449368389794 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 24412 24987 FAFRKRLRE True PC9_epitope_Rep2 1221.70945944429 1221.70780490379 101.78 3 -1.5939522668286776 0.41864449368389794 1.0 ['ENSG00000092850|ENST00000207457|TEKT2'] 34173 20694 GPGAGGHY True H1975_Epitope_Rep1 714.30853759054 714.3079849679301 86.019 1 -1.5943441578163 0.41875578194775975 1.0 ['ENST00000409262.7_1_2:74326608-74327766:+|nuORF'] 120472 17859 VFVLPFPV True NCI_RA007_Epitope_Rep3 916.5422259234799 916.54112993586 78.29 2 -1.594428257012922 0.41875578194775975 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 90941 18799 RLFRMLRIF True NCI_RA007_Epitope_Rep3 1250.7434024248598 1250.74174490379 82.209 3 -1.594450355909836 0.41875578194775975 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'SCN7A|p.N747Kfs*10|1|0.23|ENSG00000136546|chr2:166432669-166432670|-/T|frameshift_variant'] 2563 8423 AERMVSMAWL True H1975_Epitope_Rep3 1192.5732854349199 1192.57218993586 37.384 2 -1.5945585755108027 0.4187679868439085 1.0 ['ENST00000446420.2_1_9:96233459-96233558:+|nuORF'] 43946 16649 ILETLDALVDP True PC9_epitope_Rep6 1197.6492697428098 1197.64816993586 76.509 2 -1.5946286150483973 0.4187679868439085 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2', 'ENST00000483634.1_1_6:24408642-24418827:+|nuORF'] 127626 3028 VRDICNEFPVV True NCI_RA007_Epitope_Rep4 1289.6438075228903 1289.64217490379 16.95 3 -1.5946941637078103 0.4187679868439085 1.0 ['nc|ENSG00000166049|Q8IV76-2|PASD1', 'ENST00000464219.1_1_X:150770025-150841134:+|nuORF', 'ENSG00000166049|ENST00000370357|PASD1'] 17908 7047 EIDQELVIPC True H1975_Epitope_Rep3 1157.56382586669 1157.56272993586 32.072 2 -1.59476590071153 0.4187679868439085 1.0 ['ENSG00000101544|ENST00000262198|ADNP2'] 109350 21503 TGIEDLKPNNT True PC9_epitope_Rep3 1200.5986311522797 1200.5969849037901 88.005 3 -1.5947661923527927 0.4187679868439085 1.0 ['DNMT3B|p.G347D|1|0.4|ENSG00000088305|chr20:32792744-32792744|G/A|missense_variant'] 79635 17739 PHEGSFGF True NCI_RA007_Epitope_Rep5 876.37661715036 876.37552993586 75.013 2 -1.5947765565501908 0.4187679868439085 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENST00000595357.5_1_19:47225490-47234099:-|nuORF'] 130767 11768 VVDTVLAL True NCI_RA007_Epitope_Rep4 828.4956696538799 828.49456993586 52.239 2 -1.5948461781766576 0.4187679868439085 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 73090 11051 NDNGNGKN True H1975_Epitope_Rep2 831.34710792723 831.34655496793 47.539 1 -1.5949143737387657 0.4187974647404785 1.0 ['ENSG00000104765|ENST00000380629|BNIP3L', 'nc|ENSG00000104765|O60238-2|BNIP3L'] 6054 5848 APMDVGEEPL True NCI_RA007_Epitope_Rep1 1056.47976188956 1056.4786699358601 26.799 2 -1.5950377725627274 0.41880410204874036 1.0 ['ENSG00000197594|ENST00000647893|ENPP1', 'ENPP1|p.I889Sfs*24|1|0.15|ENSG00000197594|chr6:131890396-131890396|G/-|frameshift_variant'] 138558 9974 YRNPEDYKR True PC9_epitope_Rep1 1239.5996342117899 1239.5979749037901 43.23 3 -1.595276157566959 0.4188678383409275 1.0 ['ENSG00000168016|ENST00000645898|TRANK1', 'nc|ENSG00000168016|O15050|TRANK1'] 10203 20336 CDPYLLPH True NCI_RA007_Epitope_Rep5 956.4425885352 956.44148993586 85.16 2 -1.5953285514861737 0.4188744746939521 1.0 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2', 'ENST00000530992.1_1_17:32364642-32365872:-|nuORF', 'ENST00000580203.1_1_17:60689719-60689923:+|nuORF'] 13276 7877 DLWLELRH True NCI_RA007_Epitope_Rep1 1080.5716285587998 1080.5705299358601 34.633 2 -1.5956110862632573 0.4189153695942628 1.0 ['STXBP2|p.V289L|1|0.26|ENSG00000076944|chr19:7642499-7642499|G/T|missense_variant'] 139051 28147 YSKQSVFFVW True NCI_RA007_Epitope_Rep1 1289.6444591458899 1289.64280490379 118.65 3 -1.5957145140857152 0.41893897871562985 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10', 'ENST00000469521.5_1_21:45509650-45516542:+|nuORF', 'ENST00000483973.5_1_21:45509395-45516542:+|nuORF'] 124401 5598 VLEEGVLNPE True NCI_RA007_Epitope_Rep1 1097.5604547384098 1097.5593499358602 25.84 2 -1.5957632399388797 0.41893897871562985 1.0 ['ENSG00000138801|ENST00000265174|PAPSS1'] 62528 2931 LLSVLVQIPKQ True H1975_Epitope_Rep1 1236.78055869588 1236.7789049037901 14.908 3 -1.5958061611731587 0.41893897871562985 1.0 ['ENSG00000057468|ENST00000263187|MSH4'] 128993 6241 VSWQPQRR True NCI_RA007_Epitope_Rep5 1055.5624608574299 1055.56136993586 30.682 2 -1.595809111282678 0.41893897871562985 1.0 ['ENST00000481024.5_1_X:30671646-30683673:+|nuORF'] 118237 9267 VAYWGTGD True PC9_epitope_Rep1 867.3762827971899 867.37518993586 40.498 2 -1.5958326131897893 0.41893897871562985 1.0 ['ALDH3A1|p.G306W|1|0.19|ENSG00000108602|chr17:19740369-19740369|C/A|missense_variant'] 71416 18193 MINLTIHLVK True NCI_RA007_Epitope_Rep3 1180.7002002002002 1180.69855490379 79.68 3 -1.5958372565743024 0.41893897871562985 1.0 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 33706 15560 GLQMASRYTV True PC9_epitope_Rep2 1124.5648289261999 1124.56372993586 65.126 2 -1.5958592961567748 0.41893897871562985 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 71650 27050 MLRLHQGH True PC9_epitope_Rep2 990.5181535173001 990.51704993586 111.43 2 -1.5960543249286354 0.41896845062059673 1.0 ['ENST00000255078.7_1_11:68707211-68707535:+|nuORF'] 89094 25108 REEYEEKF True PC9_epitope_Rep4 1128.5087535187197 1128.50710490379 105.18 3 -1.5963167261073337 0.4189787855952136 1.0 ['GIMAP4|p.I263F|1|0.2|ENSG00000133574|chr7:150572857-150572857|A/T|missense_variant'] 48864 9923 KESQVDELNIW True NCI_RA007_Epitope_Rep1 1359.6670450652698 1359.66594993586 42.601 2 -1.5963200600900327 0.4189787855952136 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 76418 22324 NSSRPSNQ True PC9_epitope_Rep1 888.4049571565199 888.40386993586 90.683 2 -1.5963330034132273 0.4189787855952136 1.0 ['ENSG00000111412|ENST00000261318|SPRING1'] 21428 4347 ERPGPSPLP True PC9_epitope_Rep5 948.5028802926399 948.50178993586 21.79 2 -1.5963376628647121 0.4189787855952136 1.0 ['nc|ENSG00000104852|P08621-4|SNRNP70', 'ENST00000544278.2_1_19:49607703-49611697:+|nuORF', 'ENST00000601065.5_1_19:49605423-49611697:+|nuORF', 'ENST00000401730.5_1_19:49606720-49611697:+|nuORF', 'ENSG00000104852|ENST00000598441|SNRNP70'] 134436 27135 WTHGAQGG True H1975_Epitope_Rep2 812.3565504121198 812.35544993586 112.05 2 -1.5963832842142238 0.4189787855952136 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 135305 22625 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 94.208 2 -1.596429468726876 0.4189854195448888 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 35837 13591 GVAAAGHA True NCI_RA007_Epitope_Rep1 652.3292730351201 652.32872496793 56.877 1 -1.5965616648614027 0.41900347095359886 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 80736 13617 PLRLNNTSQ True NCI_RA007_Epitope_Rep5 1041.55670677065 1041.55560993586 59.063 2 -1.596810536905175 0.4190462054871157 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1', 'ESPL1|p.E1511Kfs*24|1|0.2|ENSG00000135476|chr12:53288323-53288323|G/-|frameshift_variant'] 19750 11580 ELSSAAGLP True PC9_epitope_Rep5 843.43379767331 843.43324496793 49.537 1 -1.5968356652817643 0.4190462054871157 1.0 ['ENSG00000061676|ENST00000361354|NCKAP1', 'nc|ENSG00000061676|Q9Y2A7-2|NCKAP1', 'NUP35-NCKAP1|1|fusion'] 125660 21504 VMPFLMTV True PC9_epitope_Rep4 936.4812825430399 936.48018993586 90.896 2 -1.596925607770777 0.4190462054871157 1.0 ['ENST00000371157.7_1_X:123184100-123184130:+|nuORF'] 90400 8729 RILQKLIKPP True PC9_epitope_Rep4 1204.8019628467998 1204.8008699358602 41.08 2 -1.5969515764884419 0.41905283828835 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 126193 23124 VPGKLAPP True H1975_Epitope_Rep2 777.4748746396499 777.47376993586 95.406 2 -1.597083204523409 0.4190546866080603 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 72742 9347 MYVPVCPPHI True PC9_epitope_Rep5 1154.56165812206 1154.56056993586 40.907 2 -1.5971745063481129 0.4190546866080603 1.0 ['ENST00000488952.1_1_2:96809564-96810280:-|nuORF'] 68934 26075 LVFRKPRGLFI True PC9_epitope_Rep3 1344.8394109846797 1344.83776490379 106.22 3 -1.5971875907746724 0.41906131908529415 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 76372 20954 NSHLIVHKRIH True H1975_Epitope_Rep1 1352.77893598644 1352.7772949037899 87.045 3 -1.5972297114013843 0.4190631671480598 1.0 ['ENSG00000166704|ENST00000551380|ZNF606'] 41823 18662 IDSLDALVKL True PC9_epitope_Rep2 1085.63322575585 1085.6321299358601 77.148 2 -1.5972567098446657 0.4190631671480598 1.0 ['nc|ENSG00000171962|Q9H069-2|DRC3', 'ENSG00000171962|ENST00000399187|DRC3'] 76074 12251 NRLVMGGP True H1975_Epitope_Rep2 842.4432572415399 842.44214993586 52.205 2 -1.597305258547699 0.41906686302042306 1.0 ['ENST00000602076.5_1_19:49949641-49950083:-|nuORF', 'ENST00000595633.5_1_19:49949641-49950433:-|nuORF', 'ENSG00000104872|ENST00000262265|PIH1D1'] 122379 5978 VGSFEHNL True PC9_epitope_Rep4 901.4293809992099 901.42828993586 29.941 2 -1.5973319097909608 0.41906686302042306 1.0 ['nc|ENSG00000138688|Q2LD37-4|BLTP1', 'nc|ENSG00000138688|Q2LD37|BLTP1', 'ENSG00000138688|ENST00000679879|BLTP1', 'nc|ENSG00000138688|Q2LD37-7|BLTP1', 'nc|ENSG00000138688|Q2LD37-6|BLTP1'] 18812 11019 ELEAVILSK True H1975_Epitope_Rep3 1000.580461907 1000.57936993586 47.474 2 -1.5973601263747046 0.41906686302042306 1.0 ['ENST00000452532.1_1_X:55935193-56041369:+|nuORF'] 36324 9120 GVGVGGGHG True H1975_Epitope_Rep1 695.33508669155 695.33453496793 39.984 1 -1.5974101155757454 0.41906686302042306 1.0 ['ENST00000306917.4_1_15:68570649-68570838:+|nuORF'] 7645 6994 ASLRNANPR True PC9_epitope_Rep6 997.5417254128499 997.54062993586 35.881 2 -1.5975149038300174 0.41911437345175173 1.0 ['ENSG00000161040|ENST00000440067|FBXL13', 'ENST00000379305.7_2_7:102696092-102715217:-|nuORF', 'ENST00000471074.1_1_7:102687466-102715217:-|nuORF'] 123835 20466 VIVPGSRQQ True PC9_epitope_Rep6 982.5559784946599 982.55488993586 91.437 2 -1.597549468117263 0.41911437345175173 1.0 ['ENST00000395246.5_1_5:130599842-130695031:+|nuORF', 'ENST00000504701.5_1_5:130690355-130695031:+|nuORF'] 45640 15286 ISHSTTAL True NCI_RA007_Epitope_Rep4 828.43413202648 828.4335849679301 66.449 1 -1.597765365796038 0.4191324200913242 1.0 ['ENST00000374358.4_1_1:25687202-25687394:+|nuORF'] 9112 21861 AVLHTRQDL True PC9_epitope_Rep1 1051.57744221523 1051.5763499358602 88.9 2 -1.5979163973677244 0.41914274299412135 1.0 ['ENST00000409299.7_1_20:32298376-32298511:-|nuORF'] 120622 15001 VGAGTSGG True NCI_RA007_Epitope_Rep5 604.28165413636 604.2811049679301 64.369 1 -1.5979772199052436 0.41914274299412135 1.0 ['ENSG00000259330|ENST00000638170|INAFM2'] 127272 3076 VQLDPLCA True PC9_epitope_Rep5 857.4316894983299 857.43058993586 16.806 2 -1.5980213923959288 0.41914274299412135 1.0 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 48118 28150 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 117.45 3 -1.5980428000898355 0.41914274299412135 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 112216 19270 TLWKGKMKPP True H1975_Epitope_Rep3 1184.6739854523598 1184.6728899358602 80.795 2 -1.5981086562105853 0.41914274299412135 1.0 ['ENSG00000160994|ENST00000292574|CCDC105'] 45110 4637 IQSYWRGYLMR True H1975_Epitope_Rep1 1471.7394392432298 1471.73779490379 22.866 3 -1.598171607109421 0.4191493733305938 1.0 ['nc|ENSG00000133640|Q96JM4-2|LRRIQ1', 'ENSG00000133640|ENST00000393217|LRRIQ1'] 79712 24010 PHPPLAIA True NCI_RA007_Epitope_Rep3 814.47012361238 814.46957496793 104.01 1 -1.5982851665309272 0.4191512190667519 1.0 ['ENST00000592208.5_1_19:10433104-10439782:-|nuORF'] 27524 11259 FPGFDWFFLDP True PC9_epitope_Rep1 1386.62847472858 1386.62683490379 48.187 3 -1.59833014711599 0.4191512190667519 1.0 ['nc|ENSG00000100997|Q8N2K0-3|ABHD12', 'ENSG00000100997|ENST00000339157|ABHD12', 'nc|ENSG00000100997|Q8N2K0-2|ABHD12'] 75222 9701 NPIFWEEVS True H1975_Epitope_Rep1 1119.5236753068698 1119.52317496793 42.24 1 -1.598484653316087 0.4191806777842459 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 20044 7105 ENARRYAK True H1975_Epitope_Rep1 1006.5308263759798 1006.52972993586 32.354 2 -1.5986839023296295 0.4191928414901388 1.0 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-2|MCM7', 'ENST00000463722.5_1_7:99697202-99698956:-|nuORF'] 3337 17441 AGHGHSAE True NCI_RA007_Epitope_Rep3 764.3201649034 764.3190699358599 76.525 2 -1.5987220297007099 0.4191928414901388 1.0 ['ENSG00000143631|ENST00000368799|FLG', 'CON__P20930', 'ENST00000432829.6_1_9:214876-286471:+|nuORF'] 124698 10614 VLKCNTPD True NCI_RA007_Epitope_Rep3 888.43750315476 888.43640993586 48.8 2 -1.5987315989668884 0.4191928414901388 1.0 ['ENSG00000100385|ENST00000216223|IL2RB'] 100381 12371 SLNLWMWVVH True PC9_epitope_Rep2 1283.64849898051 1283.64685490379 52.896 3 -1.5987505604779646 0.4191928414901388 1.0 ['ENST00000461377.5_1_7:45109515-45113126:+|nuORF'] 28474 6001 FSERKYFWGYI True NCI_RA007_Epitope_Rep5 1494.72958575218 1494.7279349037901 29.766 3 -1.5987526924113458 0.4191928414901388 1.0 ['nc|ENSG00000114812|P32241-4|VIPR1', 'nc|ENSG00000114812|P32241-5|VIPR1', 'ENSG00000114812|ENST00000325123|VIPR1', 'nc|ENSG00000114812|P32241-2|VIPR1'] 52856 20603 KRAYWKVM True NCI_RA007_Epitope_Rep2 1080.5902558284 1080.5891499358602 85.216 2 -1.5987823079530792 0.4191928414901388 1.0 ['ENST00000368331.5_1_1:155784176-155785627:-|nuORF'] 74532 8871 NKYLEATGQL True PC9_epitope_Rep4 1135.5873381925899 1135.58569490379 41.653 3 -1.5987839918489994 0.4191928414901388 1.0 ['ENSG00000168827|ENST00000486715|GFM1', 'nc|ENSG00000168827|Q96RP9-2|GFM1'] 62863 22298 LMPPPFLV True PC9_epitope_Rep3 912.51429692348 912.5131899358599 91.054 2 -1.5988486195574607 0.41919947042240663 1.0 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1', 'BRWD3|p.H582Q|2|0.3|ENSG00000165288|chrX:80722692-80722692|G/T|missense_variant', 'ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'nc|ENSG00000165288|Q6RI45-3|BRWD3', 'nc|ENSG00000165288|Q6RI45-4|BRWD3', 'nc|ENSG00000165288|Q6RI45-2|BRWD3', 'ENSG00000146247|ENST00000275034|PHIP', 'PHIP|p.G744Efs*5|1|0.13|ENSG00000146247|chr6:78990956-78990956|C/-|frameshift_variant'] 62806 5135 LMGLLEDYFVP True NCI_RA007_Epitope_Rep2 1295.64716156783 1295.64550490379 24.596 3 -1.5989084083105862 0.41924218215019404 1.0 ['nc|ENSG00000188677|Q9HBI1-3|PARVB', 'ENSG00000188677|ENST00000338758|PARVB', 'nc|ENSG00000188677|Q9HBI1-2|PARVB'] 58753 13970 LFLNLNHRF True PC9_epitope_Rep1 1172.6454622054 1172.6438249037901 58.574 3 -1.5990183073963977 0.41924218215019404 1.0 ['ENST00000265748.6_2_7:36429459-36435956:+|nuORF'] 38418 19403 HGQLLQRLR True NCI_RA007_Epitope_Rep3 1119.66250925187 1119.66140993586 84.677 2 -1.5990552897643635 0.41924218215019404 1.0 ['ENST00000341509.9_1_15:66853573-66855869:-|nuORF'] 137816 26674 YPEYLSNFP True PC9_epitope_Rep3 1128.51277627 1128.51112490379 109.23 3 -1.5990947272461016 0.4192506533672666 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 1741 16259 AEGTARQPLPI True PC9_epitope_Rep5 1151.6298717109098 1151.6287699358602 67.531 2 -1.5991416615441325 0.4192506533672666 1.0 ['ENST00000537670.5_1_15:66855926-66858216:-|nuORF'] 90401 7449 RILQKLIKPP True PC9_epitope_Rep6 1204.8019628467998 1204.8008699358602 37.886 2 -1.5991449626700702 0.4192506533672666 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4'] 5862 24891 APGLRLVLP True PC9_epitope_Rep1 934.5963867546599 934.59583496793 100.66 1 -1.5993273811323707 0.419320970042796 1.0 ['ENST00000395808.7_1_19:890970-891072:-|nuORF'] 71167 18018 MFCFLIFLQ True H1975_Epitope_Rep1 1160.5762455570398 1160.57514993586 75.078 2 -1.599334393213556 0.419320970042796 1.0 ['ENST00000503234.5_1_3:126746482-126752857:+|nuORF'] 127793 25592 VRKRRVRPGVF True PC9_epitope_Rep4 1368.85785501348 1368.85674993586 107.6 2 -1.5993798594200241 0.41932649404890965 1.0 ['ENST00000416255.5_1_2:101179854-101179926:+|nuORF'] 127271 3004 VQLDPLCA True PC9_epitope_Rep5 857.4316894983299 857.43058993586 16.466 2 -1.5994963492760708 0.41932649404890965 1.0 ['ENSG00000171763|ENST00000305560|SPATA5L1', 'nc|ENSG00000171763|Q9BVQ7-2|AFG2B', 'nc|ENSG00000171763|Q9BVQ7-3|AFG2B'] 92614 5947 RREQDWHGWQF True H1975_Epitope_Rep3 1543.70689324499 1543.7057899358601 27.886 2 -1.5995586487163418 0.41932649404890965 1.0 ['ENST00000499291.6_1_12:11710149-11716643:+|nuORF'] 128940 20659 VSVALSTSHN True PC9_epitope_Rep4 1013.5141732523301 1013.51306993586 87.622 2 -1.5996002360428645 0.41932649404890965 1.0 ['ENSG00000110851|ENST00000228437|PRDM4'] 71417 23167 MINLTIHLVK True PC9_epitope_Rep2 1180.7002002002002 1180.69855490379 94.599 3 -1.5996818623327822 0.41932649404890965 1.0 ['nc|ENSG00000172752|A8TX70-2|COL6A5', 'ENSG00000172752|ENST00000373157|COL6A5', 'nc|ENSG00000172752|A8TX70|COL6A5'] 134186 8794 WRLRHFVSWLW True NCI_RA007_Epitope_Rep2 1584.84662162344 1584.8455299358602 38.853 2 -1.5996978360541407 0.41932649404890965 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF', 'ENST00000435868.1_1_22:24056493-24057363:-|nuORF', 'ENST00000451837.5_1_22:24056493-24059477:-|nuORF', 'ENST00000422506.5_1_22:24056493-24059433:-|nuORF', 'ENST00000452737.5_1_22:24056401-24059477:-|nuORF', 'nc|ENSG00000272578|Q6P575|GUSBP11'] 38384 17553 HGGGDGGY True PC9_epitope_Rep6 718.2670667013801 718.2665149679301 80.157 1 -1.599752434398082 0.4193434280041535 1.0 ['ENST00000512222.2_1_4:83050145-83050523:+|nuORF'] 127116 7841 VQDAIADAEQR True H1975_Epitope_Rep1 1214.5891290977397 1214.58802993586 35.111 2 -1.5998115648063798 0.4193434280041535 1.0 ['ENSG00000172867|ENST00000309680|KRT2', 'CON__P35908v2', 'CON__P35908'] 120012 11104 VFDEADRIL True PC9_epitope_Rep6 1076.5502244078798 1076.54912993586 53.643 2 -1.599837442162928 0.4193434280041535 1.0 ['nc|ENSG00000125485|Q9H8H2-4|DDX31', 'nc|ENSG00000125485|Q9H8H2-2|DDX31', 'nc|ENSG00000125485|Q9H8H2|DDX31', 'ENSG00000125485|ENST00000372159|DDX31'] 60895 6243 LKRLKAKKP True PC9_epitope_Rep2 1080.74953335112 1080.74842993586 29.411 2 -1.5998606857395619 0.4193434280041535 1.0 ['ENST00000373465.2_1_X:46278605-46278842:-|nuORF'] 31107 24485 GCCICRAK True H1975_Epitope_Rep1 852.3768345578399 852.37572993586 101.48 2 -1.599869048554156 0.4193434280041535 1.0 ['ENSG00000139146|ENST00000337682|SINHCAF'] 129641 8102 VTHLLGYPTQN True PC9_epitope_Rep1 1241.6404363946099 1241.63878490379 35.99 3 -1.59994922230787 0.4193434280041535 1.0 ['ENSG00000243284|ENST00000368100|VSIG8', 'nc|ENSG00000188004|P0DPA3|SNHG28'] 108139 9011 TDQFTITMW True NCI_RA007_Epitope_Rep1 1141.5113963710098 1141.51028993586 39.053 2 -1.5999877885210474 0.4193728747803464 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.V466*|1|0.33|ENSG00000158258|chr3:140532374-140532374|G/-|frameshift_variant', 'CLSTN2|p.M385K|1|0.21|ENSG00000158258|chr3:140459701-140459701|T/A|missense_variant'] 18328 15167 EIVRTILSNM True PC9_epitope_Rep1 1174.63799386646 1174.6368899358602 63.161 2 -1.6002552014060376 0.41939091043941623 1.0 ['ENST00000510718.1_1_8:82518930-82532321:-|nuORF'] 5395 7349 ALVMYNFYRW True H1975_Epitope_Rep1 1361.65906366421 1361.6579699358601 33.277 2 -1.6003362085002102 0.41940894568690096 1.0 ['FANCM|p.V123L|1|0.28|ENSG00000187790|chr14:45136398-45136398|G/T|missense_variant'] 122452 22108 VGSLQHAR True PC9_epitope_Rep6 866.4722488706999 866.47170496793 97.98 1 -1.6004224357897756 0.4194155703380838 1.0 ['ENSG00000124194|ENST00000342560|GDAP1L1', 'nc|ENSG00000124194|Q96MZ0-4|GDAP1L1'] 127978 22999 VRPRPGTG True PC9_epitope_Rep1 838.47733425114 838.47622993586 93.261 2 -1.6005842514965607 0.4194457438190966 1.0 ['ENSG00000184840|ENST00000332598|TMED9', 'ENST00000505521.1_1_5:177019227-177019656:+|nuORF'] 126659 25058 VPQYRAILWRK True PC9_epitope_Rep3 1428.8353882333997 1428.8342899358602 101.73 2 -1.6006835909216612 0.4194457438190966 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'nc|ENSG00000136895|Q5VVW2-3|GARNL3'] 10367 22098 CITPKRRLTR True PC9_epitope_Rep4 1242.7342942931398 1242.73264490379 93.216 3 -1.6007272391231955 0.4194457438190966 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 67475 5466 LTEHLDRVML True NCI_RA007_Epitope_Rep2 1225.6488929033299 1225.64725490379 25.879 3 -1.6007882173039718 0.4194457438190966 1.0 ['ENSG00000124140|ENST00000243964|SLC12A5', 'nc|ENSG00000124140|Q9H2X9|SLC12A5'] 32442 11991 GGHGFPGP True H1975_Epitope_Rep3 724.3292730351199 724.32872496793 51.282 1 -1.600849184440451 0.4194457438190966 1.0 ['nc|ENSG00000126456|Q14653-4|IRF3'] 32309 17766 GFVFSIGR True PC9_epitope_Rep6 881.4759372688098 881.47484993586 80.97 2 -1.6008577344605095 0.4194457438190966 1.0 ['ENSG00000253309|ENST00000681248|SERPINE3'] 12525 23015 DLALQLAI True PC9_epitope_Rep1 855.50656869075 855.5060249679301 93.324 1 -1.6008756852587198 0.4194457438190966 1.0 ['RASAL3|p.V706I|1|0.58|ENSG00000105122|chr19:15454405-15454405|C/T|missense_variant'] 91307 19211 RMDGLQRALQA True H1975_Epitope_Rep1 1257.66118892253 1257.66008993586 80.051 2 -1.600876100200885 0.4194457438190966 1.0 ['EMILIN3|p.E399Q|1|0.38|ENSG00000183798|chr20:41362374-41362374|C/G|missense_variant'] 90986 24927 RLIHIILLP True PC9_epitope_Rep3 1086.72773527738 1086.72662993586 101.25 2 -1.6010143309242875 0.4194589907702137 1.0 ['ENST00000548213.2_1_14:29242013-29282281:+|nuORF'] 13589 6703 DPRDAEDAI True PC9_epitope_Rep4 1000.4461532621599 1000.44504993586 32.968 2 -1.6010464239654376 0.4194589907702137 1.0 ['ENSG00000111786|ENST00000229390|SRSF9'] 63891 9324 LPVPGLPCLLA True NCI_RA007_Epitope_Rep2 1091.64128834175 1091.64018993586 40.877 2 -1.601084726870427 0.41946561401907545 1.0 ['ENST00000301015.13_2_16:88800318-88802577:-|nuORF'] 19401 9323 ELPFDRVV True PC9_epitope_Rep3 973.5232813840499 973.52218993586 40.802 2 -1.6011967595508831 0.4194689054158872 1.0 ['nc|ENSG00000073150|Q96RD6-1|PANX2', 'ENSG00000073150|ENST00000395842|PANX2'] 23163 6625 EVPASPQRPSP True NCI_RA007_Epitope_Rep5 1163.59348620219 1163.5923899358602 32.146 2 -1.6012166544936717 0.4194689054158872 1.0 ['ENST00000447794.1_1_17:18553574-18554852:+|nuORF'] 108931 19658 TETIRMSYFGE True NCI_RA007_Epitope_Rep4 1332.6020022805599 1332.60034490379 84.954 3 -1.6012893324950332 0.4194689054158872 1.0 ['ENST00000601247.5_1_19:17858586-17877404:+|nuORF'] 22079 6755 ESSLWRST True PC9_epitope_Rep4 964.46140940348 964.46030993586 33.179 2 -1.601389147434987 0.4194689054158872 1.0 ['ENSG00000108018|ENST00000263054|SORCS1', 'nc|ENSG00000108018|Q8WY21-4|SORCS1', 'nc|ENSG00000108018|Q8WY21-3|SORCS1', 'nc|ENSG00000108018|Q8WY21-2|SORCS1', 'ENSG00000156395|ENST00000369701|SORCS3'] 59742 11700 LGVPGQATP True PC9_epitope_Rep4 838.45486747106 838.45376993586 52.766 2 -1.6014190331741398 0.4194689054158872 1.0 ['ENST00000586790.5_1_19:56159538-56160159:+|nuORF'] 13146 15288 DLSSPGMT True H1975_Epitope_Rep3 806.3480194440201 806.3474749679301 64.213 1 -1.6015530140261511 0.4194689054158872 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'PHC2|p.G541_N542del|1|0.29|ENSG00000134686|chr1:33334222-33334227|GTTTCC/-|inframe_deletion', 'ENST00000493483.5_1_1:33799498-33815372:-|nuORF', 'ENST00000485928.5_1_1:33797943-33815375:-|nuORF'] 93834 26895 RVEKYLRRRKY True NCI_RA007_Epitope_Rep1 1565.9266628492896 1565.92556993586 111.51 2 -1.6016393167482517 0.4194689054158872 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF', 'nc|ENSG00000135636|O75923-15|DYSF', 'DYSF|p.E1219Sfs*42|1|0.24|ENSG00000135636|chr2:71598698-71598698|G/-|frameshift_variant'] 20559 5889 EQDLVWKFRYY True NCI_RA007_Epitope_Rep2 1545.76161415645 1545.76050993586 27.522 2 -1.6016435612479731 0.4194689054158872 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 12103 9518 DIFVGEPSPDL True H1975_Epitope_Rep1 1187.5710194221099 1187.56992993586 41.533 2 -1.601692221419171 0.4194689054158872 1.0 ['TECPR1|p.S743G|1|0.33|ENSG00000205356|chr7:98231016-98231016|T/C|missense_variant'] 71481 22409 MKKLSGHP True NCI_RA007_Epitope_Rep5 896.49020743396 896.48910993586 93.363 2 -1.6017239715104392 0.4194689054158872 1.0 ['ENSG00000178950|ENST00000314167|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant'] 59533 9592 LGQKKRQI True PC9_epitope_Rep6 969.6083484206899 969.60724993586 47.209 2 -1.6017668285585087 0.4194689054158872 1.0 ['nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 58036 14974 LERHMEDTHP True PC9_epitope_Rep1 1263.56661983135 1263.56552993586 62.418 2 -1.601812392631602 0.4194689054158872 1.0 ['ENSG00000129675|ENST00000250617|ARHGEF6', 'nc|ENSG00000129675|Q15052-2|ARHGEF6'] 75184 24223 NNNLNHLKF True PC9_epitope_Rep4 1112.57269118796 1112.5715899358602 101.65 2 -1.60186545724912 0.4194689054158872 1.0 ['ENSG00000103404|ENST00000219689|USP31'] 33574 20345 GLKRMLLDIIY True H1975_Epitope_Rep2 1333.77917879689 1333.7775449037902 84.31 3 -1.6019011125569915 0.4194689054158872 1.0 ['ENST00000550906.1_1_12:29614693-29617397:+|nuORF'] 129164 14731 VTDEDSSH True PC9_epitope_Rep6 888.34610486772 888.34500993586 68.613 2 -1.6019597923935054 0.4194689054158872 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant'] 33708 14867 GLQMASRYTV True PC9_epitope_Rep4 1124.5648289261999 1124.56372993586 65.124 2 -1.6020554268310547 0.4194689054158872 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 3591 9460 AGPGRLRL True PC9_epitope_Rep6 838.5137197598599 838.51262993586 46.628 2 -1.6020770875340777 0.4194744165887264 1.0 ['ENSG00000225556|ENST00000694868|C2CD4D'] 117122 14702 TYSLAQNPE True PC9_epitope_Rep3 1021.4716397340101 1021.47107496793 61.691 1 -1.6021713050108477 0.4194744165887264 1.0 ['PCDHB1|p.L481Ffs*3|1|0.34|ENSG00000171815|chr5:141052909-141052910|-/T|frameshift_variant', 'ENSG00000171815|ENST00000306549|PCDHB1'] 40430 27214 HSAAAAAA True PC9_epitope_Rep1 668.32418765468 668.32363496793 111.19 1 -1.602203222781094 0.4194744165887264 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'EMX2|p.F51L|1|0.33|ENSG00000170370|chr10:117543418-117543418|T/C|missense_variant', 'nc|ENSG00000170370|Q04743-2|EMX2', 'nc|ENSG00000006377|P56179-2|DLX6', 'DLX6|p.D256Tfs*37|1|0.09|ENSG00000006377|chr7:97009929-97009929|G/-|frameshift_variant', 'ENSG00000006377|ENST00000518156|DLX6', 'ENSG00000166188|ENST00000299237|ZNF319', 'ENSG00000043355|ENST00000376335|ZIC2'] 45720 15009 ISLSALPHIT True PC9_epitope_Rep4 1050.60734536118 1050.6062499358602 65.67 2 -1.6022050961444747 0.4194744165887264 1.0 ['ENST00000367306.5_1_1:201453677-201453818:-|nuORF'] 57806 23817 LEPLILYLM True PC9_epitope_Rep4 1103.63005495171 1103.6289499358602 100.03 2 -1.602216947006758 0.4194744165887264 1.0 ['ENST00000435236.2_1_X:98974480-98975440:-|nuORF'] 83506 6936 QDIRYLEK True NCI_RA007_Epitope_Rep2 1063.56620882519 1063.5651099358602 31.599 2 -1.6022316745290737 0.4194744165887264 1.0 ['NLRC4|p.G681E|1|0.36|ENSG00000091106|chr2:32249822-32249822|C/T|missense_variant'] 71092 14668 METCCPCCCCP True NCI_RA007_Epitope_Rep4 1191.30195755903 1191.30031490379 63.829 3 -1.602270964294353 0.4194810379241517 1.0 ['ENST00000599649.5_1_19:52149845-52150035:-|nuORF'] 20049 9122 ENDIQLYQSQ True H1975_Epitope_Rep2 1236.5622456435601 1236.5611499358602 40.04 2 -1.60237568732638 0.41951047036817374 1.0 ['nc|ENSG00000138778|Q02224-3|CENPE', 'ENSG00000138778|ENST00000265148|CENPE'] 124988 22535 VLNNRFIKVY True PC9_epitope_Rep5 1264.72919182936 1264.72808993586 91.687 2 -1.6025697763402076 0.41951709114134833 1.0 ['nc|ENSG00000139746|Q5T8P6-3|RBM26', 'nc|ENSG00000139746|Q5T8P6-2|RBM26', 'ENSG00000139746|ENST00000438737|RBM26', 'nc|ENSG00000139746|Q5T8P6-5|RBM26', 'nc|ENSG00000139746|Q5T8P6-4|RBM26'] 63925 12648 LPWFRTLSWYF True NCI_RA007_Epitope_Rep3 1514.77105664134 1514.76994993586 56.994 2 -1.6026319941943474 0.41952371176349823 1.0 ['ENSG00000163624|ENST00000295887|CDS1', 'ENST00000467923.5_1_20:5107766-5163790:+|nuORF', 'nc|ENSG00000101290|O95674-2|CDS2', 'ENST00000468817.5_1_20:5109393-5167506:+|nuORF', 'ENST00000379070.3_1_20:5157275-5170877:+|nuORF', 'ENSG00000101290|ENST00000460006|CDS2'] 55594 23100 LCLVPQWLW True PC9_epitope_Rep2 1156.61032256664 1156.6086749037902 94.345 3 -1.6028115741736453 0.41956454795332976 1.0 ['OR6S1|p.G154Dfs*62|1|0.19|ENSG00000181803|chr14:20641231-20641231|C/-|frameshift_variant'] 45439 10437 ISEAEQRTI True PC9_epitope_Rep3 1045.5403880001702 1045.53928993586 45.083 2 -1.602901510353437 0.41956638268267926 1.0 ['ENSG00000077420|ENST00000376236|APBB1IP', 'nc|ENSG00000077420|Q7Z5R6-2|APBB1IP'] 22544 7904 ETLNKHRADNR True H1975_Epitope_Rep1 1352.69090882768 1352.68980993586 35.354 2 -1.602948724591818 0.41956638268267926 1.0 ['TNPO3|p.V807*|1|0.18|ENSG00000064419|chr7:128972437-128972437|C/-|frameshift_variant', 'nc|ENSG00000064419|Q9Y5L0-3|TNPO3', 'ENSG00000064419|ENST00000265388|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-1|TNPO3', 'nc|ENSG00000064419|Q9Y5L0-5|TNPO3'] 107473 4594 TAAARLPPSV True H1975_Epitope_Rep2 981.5607295219299 981.55962993586 22.776 2 -1.6031303555664855 0.41957483691437436 1.0 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A'] 62345 17192 LLRKLGVKLV True H1975_Epitope_Rep3 1137.7961491903698 1137.79557496793 71.769 1 -1.603131066561499 0.41957483691437436 1.0 ['FOXK2-TBCD|1|fusion', 'ENSG00000141556|ENST00000355528|TBCD', 'nc|ENSG00000141556|Q9BTW9-4|TBCD', 'nc|ENSG00000141556|Q9BTW9-5|TBCD'] 48108 25831 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 106.07 3 -1.6032378197164374 0.41957483691437436 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 33020 10107 GIYLLFIIEH True NCI_RA007_Epitope_Rep2 1216.68559568188 1216.68448993586 43.902 2 -1.603417975815776 0.4195803398335044 1.0 ['nc|ENSG00000196950|Q9ULF5-2|SLC39A10', 'ENST00000465851.1_1_2:196545249-196581758:+|nuORF', 'ENST00000430412.5_1_2:196521853-196599762:+|nuORF', 'ENSG00000196950|ENST00000359634|SLC39A10'] 72977 4320 NCTFFFFF True PC9_epitope_Rep1 1071.4524249429098 1071.45132993586 21.502 2 -1.603490288906953 0.4195803398335044 1.0 ['ENST00000478856.5_1_3:100067842-100068019:+|nuORF'] 73578 7836 NFWFLQYPLHP True H1975_Epitope_Rep2 1460.7241064489199 1460.72300993586 35.091 2 -1.6035001561268782 0.4195803398335044 1.0 ['ENST00000261797.6_1_5:149933402-149933609:+|nuORF'] 119328 17812 VELSSLLVR True PC9_epitope_Rep6 1014.6073453611799 1014.60624993586 81.146 2 -1.603576934459245 0.4195803398335044 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-2|CDK5RAP3'] 27215 15212 FLTWEVLSP True H1975_Epitope_Rep1 1090.5698972233 1090.56937496793 63.777 1 -1.6035951497925423 0.4195803398335044 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|403|3|anti-sense'] 90090 9137 RGQPACGL True H1975_Epitope_Rep3 800.39630704912 800.39520993586 40.134 2 -1.6037029132656342 0.4195803398335044 1.0 ['ENST00000380094.9_1_10:5931461-5931704:-|nuORF'] 84325 5835 QFNWCRKVYTK True PC9_epitope_Rep5 1471.73943924323 1471.73779490379 27.436 3 -1.6038508189643699 0.41959357752132465 1.0 ['KLF7|p.G225W|1|0.25|ENSG00000118263|chr2:207123834-207123834|C/A|missense_variant'] 18184 13666 EIQKLIKEPAP True NCI_RA007_Epitope_Rep1 1264.73908780672 1264.73798993586 57.17 2 -1.6039117390154884 0.41959357752132465 1.0 ['ENSG00000063241|ENST00000425675|ISOC2', 'nc|ENSG00000063241|Q96AB3-2|ISOC2', 'nc|ENSG00000063241|Q96AB3-3|ISOC2'] 91100 11236 RLLWMMMTVRY True NCI_RA007_Epitope_Rep2 1498.76110328794 1498.7600099358601 48.291 2 -1.603942695230531 0.41960202976224414 1.0 ['chr15:64981025-64982932|139|19.86|0.0|20.92|-|1|SPG21,None|2', 'ENST00000204566.6_1_15:65273230-65275885:-|nuORF'] 59356 21379 LGKQHREK True H1975_Epitope_Rep3 994.5672118846999 994.56610993586 89.332 2 -1.6040601457873933 0.41960202976224414 1.0 ['ZNF830|p.A116Gfs*23|1|0.33|ENSG00000198783|chr17:34961913-34961913|C/-|frameshift_variant', 'ENSG00000198783|ENST00000361952|ZNF830'] 20310 17584 EPEAGEVS True H1975_Epitope_Rep2 816.350127619 816.34902993586 72.949 2 -1.6041237062014158 0.41960202976224414 1.0 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-2|PCDHA1', 'ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'ENSG00000255408|ENST00000522353|PCDHA3', 'ENSG00000204969|ENST00000526136|PCDHA2', 'ENSG00000249158|ENST00000398640|PCDHA11', 'ENSG00000204965|ENST00000529859|PCDHA5', 'nc|ENSG00000204965|Q9Y5H7-3|PCDHA5', 'ENSG00000204967|ENST00000530339|PCDHA4', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'ENSG00000081842|ENST00000529310|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'ENSG00000204961|ENST00000532602|PCDHA9', 'nc|ENSG00000250120|Q9Y5I2-2|PCDHA10', 'ENSG00000250120|ENST00000307360|PCDHA10', 'ENSG00000248383|ENST00000253807|PCDHAC1', 'ENSG00000251664|ENST00000398631|PCDHA12'] 89996 26619 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 111.16 1 -1.604357402672231 0.4196998722860792 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 52641 9681 KQEITQNKSFF True NCI_RA007_Epitope_Rep2 1368.70376492716 1368.70266993586 42.275 2 -1.604414939344694 0.4197017035736277 1.0 ['nc|ENSG00000163092|A4UGR9-2|XIRP2', 'nc|ENSG00000163092|A4UGR9-3|XIRP2', 'nc|ENSG00000163092|A4UGR9|XIRP2', 'XIRP2|p.T3185Kfs*19|1|0.16|ENSG00000163092|chr2:167251471-167251471|C/-|frameshift_variant', 'ENSG00000163092|ENST00000409195|XIRP2', 'XIRP2|p.L2767*|1|0.19|ENSG00000163092|chr2:167250215-167250216|CT/A|frameshift_variant'] 108138 8380 TDQFTITMW True H1975_Epitope_Rep3 1141.5113963710098 1141.51028993586 37.217 2 -1.604418717040786 0.4197017035736277 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.V466*|1|0.33|ENSG00000158258|chr3:140532374-140532374|G/-|frameshift_variant', 'CLSTN2|p.M385K|1|0.21|ENSG00000158258|chr3:140459701-140459701|T/A|missense_variant'] 26144 12911 FHLSTRNPDGC True PC9_epitope_Rep6 1245.5560551476499 1245.55441490379 61.196 3 -1.6044754747980086 0.4197197231439355 1.0 ['ENSG00000142798|ENST00000374695|HSPG2'] 63298 13411 LPAVNLKV True PC9_epitope_Rep5 852.54328855264 852.54218993586 56.602 2 -1.6045575542869903 0.4197233846048596 1.0 ['nc|ENSG00000177674|Q6RW13-2|AGTRAP', 'ENSG00000177674|ENST00000314340|AGTRAP', 'ENST00000494437.1_1_1:11796265-11805895:+|nuORF', 'ENST00000491346.5_1_1:11796265-11806023:+|nuORF', 'nc|ENSG00000177674|Q6RW13-3|AGTRAP', 'nc|ENSG00000177674|Q6RW13-5|AGTRAP'] 77041 6788 NVVQRVVA True PC9_epitope_Rep4 883.5239500903898 883.52284993586 33.314 2 -1.6045822866088943 0.4197233846048596 1.0 ['ENSG00000214456|ENST00000381848|PLIN5', 'ENST00000586020.1_1_19:4529720-4540017:-|nuORF'] 24081 6091 EYQREGIPW True H1975_Epitope_Rep3 1176.5563724174797 1176.55526993586 28.441 2 -1.6045951635621807 0.4197233846048596 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'ENSG00000176658|ENST00000318217|MYO1D'] 122087 13180 VGRDLLRIH True NCI_RA007_Epitope_Rep4 1077.64071117813 1077.63960993586 57.807 2 -1.6046254976614658 0.4197233846048596 1.0 ['ENST00000251269.9_1_19:44471378-44471552:+|nuORF'] 88589 23672 RALKQRQQQLH True PC9_epitope_Rep5 1404.80621336344 1404.80455490379 96.033 3 -1.6046535136504327 0.4197252152100792 1.0 ['ENSG00000185298|ENST00000329214|CCDC137'] 29972 20349 FYDGIKAILQ True PC9_epitope_Rep5 1166.6335601090198 1166.6324699358602 83.307 2 -1.6046798372974624 0.4197252152100792 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B'] 79297 15846 PGKARQRA True H1975_Epitope_Rep3 882.5147823890198 882.51368993586 66.399 2 -1.6047841768508668 0.41974984892881984 1.0 ['ENSG00000095951|ENST00000379388|HIVEP1', 'nc|ENSG00000095951|P15822-2|HIVEP1', 'nc|ENSG00000095951|P15822-3|HIVEP1'] 20236 5886 ENVQRNLKH True PC9_epitope_Rep6 1136.6050539454 1136.60341490379 30.889 3 -1.6048190665098008 0.41974984892881984 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant', 'APOB|p.V2091L|1|0.29|ENSG00000084674|chr2:21010597-21010597|C/A|missense_variant'] 64674 24806 LRKKLYELL True NCI_RA007_Epitope_Rep5 1174.74377926434 1174.74327496793 102.9 1 -1.6048235858238173 0.4197564646326447 1.0 ['ENST00000565367.5_1_15:55647651-55647789:+|nuORF'] 19462 16849 ELQAYNRRLLH True PC9_epitope_Rep1 1411.7684308723901 1411.76732993586 69.634 2 -1.6049224771420498 0.41977448152413094 1.0 ['ENSG00000173175|ENST00000462833|ADCY5', 'nc|ENSG00000173175|O95622-2|ADCY5', 'ENST00000552099.5_1_12:49165333-49167571:-|nuORF', 'ENST00000547260.5_1_12:49165333-49167887:-|nuORF', 'nc|ENSG00000174233|O43306-2|ADCY6', 'ENSG00000174233|ENST00000357869|ADCY6'] 129165 14896 VTDEDSSH True PC9_epitope_Rep6 888.34610486772 888.34500993586 69.289 2 -1.6049317204438986 0.41977518354690135 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant'] 84165 21028 QERNEFVRQLE True H1975_Epitope_Rep1 1446.7215402496197 1446.7204499358602 87.336 2 -1.6049627246793303 0.41977518354690135 1.0 ['ENSG00000179933|ENST00000319074|C14orf119'] 90816 21570 RKSRVVDLNLL True PC9_epitope_Rep6 1311.7986683715096 1311.79756993586 95.846 2 -1.6049938586160006 0.41977518354690135 1.0 ['nc|ENSG00000145431|Q9NRA1-4|PDGFC', 'ENST00000506880.5_3_4:157684244-157699382:-|nuORF', 'nc|ENSG00000145431|Q9NRA1-2|PDGFC', 'ENSG00000145431|ENST00000502773|PDGFC'] 22673 6125 ETTARELPIP True NCI_RA007_Epitope_Rep1 1125.60298825673 1125.60188993586 27.863 2 -1.6050269784053997 0.41977518354690135 1.0 ['nc|ENSG00000185664|P40967-4|PMEL', 'nc|ENSG00000185664|P40967-5|PMEL', 'ENSG00000185664|ENST00000548747|PMEL', 'nc|ENSG00000185664|P40967-2|PMEL', 'nc|ENSG00000185664|P40967-3|PMEL'] 4361 22769 AIPSIMNVLL True PC9_epitope_Rep5 1069.62055289717 1069.61944993586 92.574 2 -1.6050380692723611 0.41977518354690135 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'ENSG00000185313|ENST00000449082|SCN10A'] 81093 14075 PPGGGCGS True NCI_RA007_Epitope_Rep4 630.24316045266 630.2426149679301 61.422 1 -1.6050958845593766 0.41977518354690135 1.0 ['ENSG00000121871|ENST00000475390|SLITRK3'] 56618 11466 LDYIYRVL True PC9_epitope_Rep1 1053.58588164061 1053.58478993586 48.985 2 -1.6050962458136342 0.41977518354690135 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 3517 22306 AGLSSRNEDR True NCI_RA007_Epitope_Rep2 1103.53194857479 1103.5313749679299 92.651 1 -1.6052054415883341 0.419781798283115 1.0 ['ENST00000593587.5_1_19:41771040-41778038:+|nuORF', 'ENST00000263367.7_2_19:41771210-41778038:+|nuORF'] 16770 11185 EFEEDLTGI True PC9_epitope_Rep4 1051.47097102767 1051.46986993586 50.802 2 -1.6052799083170297 0.4197950273030928 1.0 ['nc|ENSG00000114115|P09455|RBP1', 'nc|ENSG00000114115|P09455-2|RBP1', 'nc|ENSG00000114115|P09455-3|RBP1', 'ENSG00000114115|ENST00000672186|RBP1'] 53513 23254 KVNFIRMVI True PC9_epitope_Rep3 1118.66342076866 1118.66232993586 94.723 2 -1.605282922649176 0.4197950273030928 1.0 ['GAD2|p.F557I|1|0.37|ENSG00000136750|chr10:26300872-26300872|T/A|missense_variant'] 48110 26357 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 108.45 3 -1.6053329996393828 0.41979685594099475 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 128521 24423 VSGLGCFDGSK True H1975_Epitope_Rep1 1068.4909952796 1068.4898899358602 101.25 2 -1.6053837246088882 0.41979685594099475 1.0 ['ENST00000493916.1_1_1:38018188-38019866:-|nuORF'] 63329 11460 LPDSLIAP True H1975_Epitope_Rep3 824.4643695256 824.46326993586 49.2 2 -1.6054444651053068 0.41980347005312235 1.0 ['ENSG00000175727|ENST00000319080|MLXIP', 'nc|ENSG00000175727|Q9HAP2-3|MLXIP'] 71614 24464 MLLFFLLF True PC9_epitope_Rep1 1042.5925472441797 1042.59144993586 98.943 2 -1.605498589126473 0.4198100840144546 1.0 ['ENST00000266659.7_2_12:75893342-75893732:+|nuORF'] 30633 6480 GALDTHRR True PC9_epitope_Rep5 924.488961564 924.48786993586 29.898 2 -1.6055905049198407 0.41982809721398934 1.0 ['CON__Q32PI4'] 74331 8146 NINNTLGPAL True NCI_RA007_Epitope_Rep3 1025.5505587610498 1025.54946993586 39.155 2 -1.6056244175811007 0.41984132412283703 1.0 ['nc|ENSG00000108515|P13929-2|ENO3', 'ENSG00000108515|ENST00000519602|ENO3', 'ENST00000519834.5_1_17:4855124-4857242:+|nuORF', 'ENST00000521659.5_2_17:4855435-4858958:+|nuORF'] 135303 22279 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 92.844 2 -1.6056767588797727 0.41984132412283703 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 61450 9731 LLFAHIAA True PC9_epitope_Rep1 854.5014237406599 854.50032993586 42.288 2 -1.6059416825168034 0.41988761355476273 1.0 ['ENSG00000112818|ENST00000230588|MEP1A'] 79625 24996 PHALLVYP True PC9_epitope_Rep3 908.51198842436 908.51088993586 101.49 2 -1.6060059501187718 0.41988761355476273 1.0 ['ENSG00000090581|ENST00000204679|GNPTG'] 38048 20437 HELHLYKHEQI True H1975_Epitope_Rep1 1445.74154741821 1445.7404499358602 84.998 2 -1.6060175024029302 0.41988761355476273 1.0 ['ENST00000557001.5_1_14:52037074-52042621:+|nuORF', 'ENST00000557103.5_1_14:52042417-52042621:+|nuORF'] 102205 8038 SPSPKLRI True PC9_epitope_Rep1 896.5443511817999 896.54324993586 35.74 2 -1.6060519784422866 0.41988761355476273 1.0 ['ENST00000359451.6_1_6:110501026-110501203:-|nuORF', 'ENST00000392586.5_1_6:110499922-110501203:-|nuORF'] 125184 14482 VLQEILILPT True H1975_Epitope_Rep3 1137.7009113928498 1137.69980993586 61.064 2 -1.606076633761033 0.41988761355476273 1.0 ['ENSG00000109805|ENST00000251496|NCAPG'] 137920 7811 YPQWRRIH True NCI_RA007_Epitope_Rep1 1154.6097454030198 1154.60864993586 34.375 2 -1.6061417409143492 0.41988761355476273 1.0 ['ENSG00000104643|ENST00000221086|MTMR9', 'nc|ENSG00000104643|Q96QG7-2|MTMR9', 'ENST00000530200.1_1_8:11152806-11180294:+|nuORF'] 112470 17142 TNQLKIVEI True H1975_Epitope_Rep3 1056.6179100448799 1056.6168099358601 71.568 2 -1.6061547523794601 0.41988761355476273 1.0 ['nc|ENSG00000133401|O15018-2|PDZD2', 'ENSG00000133401|ENST00000438447|PDZD2'] 24083 6467 EYQREGIPW True NCI_RA007_Epitope_Rep2 1176.5563724174797 1176.55526993586 29.764 2 -1.6063095114465906 0.419909275342497 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14', 'ENSG00000176658|ENST00000318217|MYO1D'] 26575 6509 FKATNDYEHC[Carbamidomethyl]L True H1975_Epitope_Rep1 1396.6081505695897 1396.60704993586 30.097 2 -1.6063279276764197 0.419909275342497 1.0 ['ENSG00000164363|ENST00000324642|SLC6A18'] 29924 26336 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 108.99 3 -1.6063994583952785 0.419909275342497 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 112777 23088 TPLFIPAKT True H1975_Epitope_Rep3 986.5800679841799 986.57896993586 96.424 2 -1.606412602100676 0.419909275342497 1.0 ['ENSG00000130363|ENST00000367069|RSPH3', 'nc|ENSG00000130363|Q86UC2|RSPH3'] 89990 26849 RGCCGGCC True H1975_Epitope_Rep2 757.21280600785 757.2122549679301 110.75 1 -1.6065027487037387 0.419909275342497 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 122447 6840 VGSLLPPV True NCI_RA007_Epitope_Rep3 780.47454028648 780.47344993586 34.018 2 -1.606531897654396 0.4199158868918041 1.0 ['ENSG00000161021|ENST00000292599|MAML1'] 8670 6183 AVAVAAPRP True NCI_RA007_Epitope_Rep3 850.50248636982 850.50138993586 31.328 2 -1.6065889139166991 0.41992249829040346 1.0 ['ENST00000339176.7_1_16:67918814-67919670:+|nuORF'] 93787 13335 RTVSVLDPYYR True H1975_Epitope_Rep3 1367.7197493444698 1367.7186499358602 56.554 2 -1.606788425510789 0.4199519038989754 1.0 ['nc|ENSG00000070759|Q96S53-3|TESK2', 'nc|ENSG00000070759|Q96S53-2|TESK2', 'ENSG00000070759|ENST00000372086|TESK2'] 12913 7221 DLMYKHRFK True H1975_Epitope_Rep1 1236.6437479532399 1236.6426499358602 32.786 2 -1.6068515516633382 0.41995851473638623 1.0 ['TGIF2LX|p.W68L|1|0.22|ENSG00000153779|chrX:89922288-89922288|G/T|missense_variant'] 72953 3759 NCIHPGFT True PC9_epitope_Rep2 887.39597269595 887.39486993586 19.723 2 -1.6069940293243297 0.4199945295404814 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 75445 12567 NQHIPLGELA True PC9_epitope_Rep2 1090.5771078620598 1090.5760099358602 53.647 2 -1.6069962393715944 0.4199945295404814 1.0 ['nc|ENSG00000135253|Q6ZWJ8|KCP', 'ENSG00000135253|ENST00000610776|KCP'] 107474 4686 TAAARLPPSV True H1975_Epitope_Rep2 981.5607295219299 981.55962993586 23.12 2 -1.6070837967172131 0.42002096913889775 1.0 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A'] 128789 4854 VSRELSAHTG True PC9_epitope_Rep2 1055.53597132607 1055.5348699358601 24.041 2 -1.6071291947191955 0.42002096913889775 1.0 ['ENSG00000111664|ENST00000229264|GNB3', 'nc|ENSG00000111664|P16520-2|GNB3'] 1974 13240 AEIVAAEK True PC9_epitope_Rep4 829.45453311789 829.4539849679301 58.824 1 -1.6071703828936559 0.42002096913889775 1.0 ['nc|ENSG00000180881|Q9BXY5|CAPS2', 'ENSG00000180881|ENST00000699294|CAPS2', 'nc|ENSG00000180881|Q9BXY5-5|CAPS2'] 19400 9142 ELPFDRVV True PC9_epitope_Rep1 973.5232813840499 973.52218993586 40.015 2 -1.6071987337148923 0.42002096913889775 1.0 ['nc|ENSG00000073150|Q96RD6-1|PANX2', 'ENSG00000073150|ENST00000395842|PANX2'] 10402 10578 CLFHFGNW True PC9_epitope_Rep1 1022.44325724154 1022.4421499358599 45.579 2 -1.6072537422687232 0.42002165118796647 1.0 ['ENST00000518225.5_1_8:25316927-25317966:+|nuORF'] 85292 27046 QKVPKPLC True PC9_epitope_Rep5 911.5262585895098 911.52516993586 110.65 2 -1.6072790757364894 0.42002165118796647 1.0 ['nc|ENSG00000111305|Q2KHT4-5|GSG1', 'nc|ENSG00000111305|Q2KHT4-4|GSG1', 'nc|ENSG00000111305|Q2KHT4-2|GSG1', 'nc|ENSG00000111305|Q2KHT4-7|GSG1', 'nc|ENSG00000111305|Q2KHT4-3|GSG1', 'nc|ENSG00000111305|Q2KHT4-6|GSG1', 'nc|ENSG00000111305|Q2KHT4-8|GSG1', 'nc|ENSG00000111305|Q2KHT4|GSG1', 'ENSG00000111305|ENST00000651961|GSG1'] 91310 19215 RMDGLQRALQA True H1975_Epitope_Rep3 1257.66118892253 1257.66008993586 80.565 2 -1.6073243511895623 0.42002165118796647 1.0 ['EMILIN3|p.E399Q|1|0.38|ENSG00000183798|chr20:41362374-41362374|C/G|missense_variant'] 51961 23003 KKWQGLQEMR True NCI_RA007_Epitope_Rep5 1302.6866753943798 1302.68503490379 95.716 3 -1.6073706667497298 0.42002165118796647 1.0 ['nc|ENSG00000062524|P29376-4|LTK', 'ENSG00000062524|ENST00000263800|LTK', 'ENST00000563518.5_1_15:41796702-41799561:-|nuORF'] 129474 12158 VTERHKKRLEK True H1975_Epitope_Rep1 1422.8419301658198 1422.84082993586 51.784 2 -1.6073730469081988 0.42002165118796647 1.0 ['ASRGL1|p.N144H|1|0.44|ENSG00000162174|chr11:62357083-62357083|A/C|missense_variant'] 23073 13441 EVLFSEVTFY True H1975_Epitope_Rep1 1232.59650589396 1232.59540993586 56.814 2 -1.6073806215779378 0.42002165118796647 1.0 ['ENST00000302609.7_1_10:38241148-38241220:-|nuORF'] 48069 1810 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 9.4026 3 -1.6073884135660683 0.42002165118796647 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 10550 25384 CPVWGIKA True NCI_RA007_Epitope_Rep3 872.4578446765198 872.45674993586 109.71 2 -1.6074879938411117 0.4200234739109131 1.0 ['ENST00000447648.6_1_7:97846532-97846739:-|nuORF'] 246 17264 AAGEPGPDRP True H1975_Epitope_Rep2 965.4566583762099 965.45556993586 71.697 2 -1.6076327749337749 0.4200234739109131 1.0 ['ENST00000504138.5_1_4:1005947-1006274:+|nuORF'] 3088 24567 AGAHALYL True PC9_epitope_Rep5 814.4337381036601 814.43264993586 99.611 2 -1.6078146079119193 0.4200366913934753 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 4516 22745 AKPGGFGMG True NCI_RA007_Epitope_Rep5 820.3901590395199 820.38906993586 94.684 2 -1.6078222060672662 0.4200366913934753 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 73165 19910 NEDNSKRDIS True PC9_epitope_Rep4 1176.53709352488 1176.53598993586 84.718 2 -1.6079183421858614 0.4200487660369619 1.0 ['ENST00000566849.5_1_15:43653273-43656590:-|nuORF', 'nc|ENSG00000140265|Q8IWY8-4|ZSCAN29', 'nc|ENSG00000140265|Q8IWY8-2|ZSCAN29', 'ENSG00000140265|ENST00000684362|ZSCAN29'] 14784 22078 DWRCRLSW True H1975_Epitope_Rep2 1120.52363282056 1120.5225299358601 91.258 2 -1.6079261515203789 0.4200487660369619 1.0 ['ENST00000473592.1_1_10:43048075-43048180:-|nuORF'] 71656 24612 MLSDSDNR True NCI_RA007_Epitope_Rep1 936.39709489476 936.39598993586 101.94 2 -1.6079467337387858 0.4200487660369619 1.0 ['ENST00000498524.5_1_3:15727727-15838055:-|nuORF', 'nc|ENSG00000206560|O15084-2|ANKRD28', 'nc|ENSG00000206560|O15084|ANKRD28', 'ENSG00000206560|ENST00000683139|ANKRD28', 'nc|ENSG00000206560|O15084-1|ANKRD28', 'ENST00000462657.1_1_3:15731457-15737643:-|nuORF'] 58856 16250 LFRWEQDEIPR True PC9_epitope_Rep5 1487.75211210191 1487.75100993586 67.495 2 -1.6079526129199204 0.4200487660369619 1.0 ['ENST00000460981.1_1_6:111714035-111726820:-|nuORF'] 88416 7492 QYRRVIGMFYK True PC9_epitope_Rep6 1459.7758247519498 1459.77418490379 38.066 3 -1.6079604835222086 0.4200487660369619 1.0 ['ENST00000540847.6_1_18:13073121-13088876:+|nuORF'] 108661 4527 TELESPAWWPF True NCI_RA007_Epitope_Rep2 1361.62920300457 1361.62810993586 22.24 2 -1.6079934604060784 0.4200487660369619 1.0 ['ENSG00000143740|ENST00000617596|SNAP47', 'nc|ENSG00000143740|Q5SQN1-2|SNAP47', 'nc|ENSG00000143740|Q5SQN1|SNAP47'] 79465 6004 PGPPGHGA True NCI_RA007_Epitope_Rep4 688.32927303512 688.32872496793 29.713 1 -1.607999163620165 0.4200487660369619 1.0 ['ENST00000459985.1_1_9:139702417-139703723:+|nuORF'] 123243 25007 VHNILKIGFL True H1975_Epitope_Rep2 1152.70191445236 1152.7008099358602 102.77 2 -1.6080278893997846 0.4200553738876799 1.0 ['NT5C3B|p.Q245H|1|0.17|ENSG00000141698|chr17:41827459-41827459|C/A|missense_variant'] 41614 11578 IDGGAKVKNYV True NCI_RA007_Epitope_Rep1 1162.63462273818 1162.63352993586 49.005 2 -1.6081345121107975 0.4200704105000513 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 131960 23388 VYFVVFPF True NCI_RA007_Epitope_Rep5 1016.5371405430398 1016.53604993586 97.257 2 -1.6081844702726094 0.4200704105000513 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B', 'nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E'] 135302 21241 YCIDKNYA True NCI_RA007_Epitope_Rep5 988.43241777432 988.43132993586 88.744 2 -1.6081976839893648 0.4200704105000513 1.0 ['ENSG00000187546|ENST00000342526|AGMO'] 66211 7569 LSPPVRELY True H1975_Epitope_Rep1 1072.59169529704 1072.5905899358602 34.105 2 -1.6082155792737909 0.4200704105000513 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'nc|ENSG00000111271|Q6JQN1-2|ACAD10', 'ENST00000413681.7_1_12:112130513-112186840:+|nuORF', 'nc|ENSG00000111271|Q6JQN1-3|ACAD10', 'ENST00000508303.5_1_12:112159488-112186840:+|nuORF'] 49073 20628 KFRSLLFTS True NCI_RA007_Epitope_Rep2 1097.6233297784897 1097.62222993586 85.317 2 -1.6085747149273724 0.42011962403873543 1.0 ['nc|ENSG00000168748|P43166-2|CA7', 'ENSG00000168748|ENST00000338437|CA7'] 65213 15084 LSEAHAAC True NCI_RA007_Epitope_Rep5 800.34868815036 800.34758993586 64.688 2 -1.6085754481754244 0.42011962403873543 1.0 ['ENSG00000132702|ENST00000255039|HAPLN2'] 4514 9295 AKPELSLSK True H1975_Epitope_Rep3 971.56514619603 971.56404993586 40.748 2 -1.6086654037314547 0.42011962403873543 1.0 ['ENST00000383686.2_1_3:110611078-110612293:-|nuORF'] 11431 11673 DFQQLLAEVP True NCI_RA007_Epitope_Rep1 1158.5920892198599 1158.59098993586 49.379 2 -1.6086761680621373 0.42011962403873543 1.0 ['ENST00000406539.6_1_12:123459581-123460450:+|nuORF'] 21750 4475 ESCLHTTR True PC9_epitope_Rep1 945.43381475665 945.43270993586 22.096 2 -1.6087781848129867 0.4201604083120671 1.0 ['ENST00000496906.1_1_9:35750742-35753913:+|nuORF', 'ENSG00000107185|ENST00000378078|RGP1'] 118676 9494 VEARRHQRLQ True NCI_RA007_Epitope_Rep2 1291.7221493863099 1291.72104993586 41.542 2 -1.6088641563041177 0.4201670141381 1.0 ['ENST00000606619.1_1_13:52767360-52768512:-|nuORF', 'ENST00000606974.5_1_13:52760947-52768512:-|nuORF', 'ENST00000423686.1_1_13:52763934-52768509:-|nuORF', 'ENST00000416599.5_1_13:52768206-52768563:-|nuORF'] 70360 5753 LYPWECFVF True PC9_epitope_Rep5 1202.5470536037399 1202.54539490379 27.123 3 -1.6089654894665024 0.42018501218984255 1.0 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'nc|ENSG00000240849|A5PLL7-2|PEDS1', 'ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 58580 20301 LFEMFDKLY True NCI_RA007_Epitope_Rep2 1204.58383303528 1204.58272993586 83.996 2 -1.6090129795023809 0.4201916175850716 1.0 ['nc|ENSG00000172350|Q9H172-4|ABCG4', 'nc|ENSG00000172350|Q9H172-3|ABCG4', 'nc|ENSG00000172350|Q9H172-2|ABCG4', 'ENSG00000172350|ENST00000619701|ABCG4', 'ENST00000533694.5_1_11:119025500-119029249:+|nuORF'] 27045 15273 FLNKSFHRDRR True H1975_Epitope_Rep1 1474.7905632993 1474.78946993586 64.014 2 -1.6091866599610856 0.4202323991797676 1.0 ['ENST00000215906.5_1_22:26829359-26829413:+|nuORF'] 101194 21366 SLVVAFICKLH True PC9_epitope_Rep6 1228.7002002002 1228.6991099358602 95.059 2 -1.6092885515139068 0.42025039587154395 1.0 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant'] 20234 5138 ENVMWLKPE True H1975_Epitope_Rep1 1144.5586809166 1144.55758993586 24.831 2 -1.6093192881399692 0.4202570002961883 1.0 ['nc|ENSG00000113580|P04150-2|NR3C1', 'nc|ENSG00000113580|P04150-6|NR3C1', 'nc|ENSG00000113580|P04150-7|NR3C1', 'nc|ENSG00000113580|P04150-9|NR3C1'] 22092 6376 ESVAGITAI True PC9_epitope_Rep4 859.46509780159 859.46400993586 31.611 2 -1.6093719487729132 0.42025881709650964 1.0 ['nc|ENSG00000153113|P20810-3|CAST', 'nc|ENSG00000153113|P20810-4|CAST', 'nc|ENSG00000153113|P20810-8|CAST', 'nc|ENSG00000153113|P20810-2|CAST', 'nc|ENSG00000153113|P20810|CAST', 'nc|ENSG00000153113|P20810-9|CAST', 'nc|ENSG00000153113|P20810-5|CAST', 'nc|ENSG00000153113|P20810-10|CAST', 'nc|ENSG00000153113|P20810-7|CAST', 'ENSG00000153113|ENST00000675179|CAST'] 43371 20148 IHNNKNVSK True PC9_epitope_Rep5 1052.57269118796 1052.5715899358602 82.547 2 -1.609426819546206 0.42025881709650964 1.0 ['ENST00000326291.10_1_13:73357588-73357651:+|nuORF'] 23078 22005 EVLGVRSGL True PC9_epitope_Rep4 928.5341804209199 928.53308993586 92.863 2 -1.6094975026552616 0.42026542119952154 1.0 ['ENST00000450269.5_1_1:45279484-45279676:+|nuORF'] 52912 17143 KRHWKKLW True NCI_RA007_Epitope_Rep5 1180.6981664845998 1180.69706993586 72.712 2 -1.6096429860946193 0.4202948078281275 1.0 ['ENSG00000154783|ENST00000285046|FGD5', 'nc|ENSG00000154783|Q6ZNL6-2|FGD5'] 72951 3569 NCIHPGFT True PC9_epitope_Rep2 887.39597269595 887.39486993586 19.004 2 -1.6098070414489265 0.4202966236843304 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 92571 16533 RRCCPRWP True NCI_RA007_Epitope_Rep3 1072.5171079714798 1072.5160099358602 72.827 2 -1.6098741186729746 0.4202966236843304 1.0 ['ENST00000567941.5_1_15:73044684-73075795:-|nuORF'] 136067 142 YFYFFGID True H1975_Epitope_Rep2 1070.4749342092998 1070.47382993586 0.76821 2 -1.6100973623569896 0.4203123042403672 1.0 ['ENST00000528485.1_1_11:59496051-59496324:+|nuORF'] 132351 4825 VYMAHSRSA True NCI_RA007_Epitope_Rep4 1020.48109930224 1020.48000993586 24.994 2 -1.6101324357909272 0.4203123042403672 1.0 ['MYO18B|p.S707Y|1|0.31|ENSG00000133454|chr22:25780107-25780107|C/A|missense_variant'] 104033 19927 SRSRLTLHHRT True NCI_RA007_Epitope_Rep5 1362.75926317102 1362.75760490379 83.563 3 -1.6102203384762765 0.4203123042403672 1.0 ['ZNF74|p.Q435H|1|0.17|ENSG00000185252|chr22:20406338-20406338|G/T|missense_variant'] 83334 7326 QAMDHAPG True H1975_Epitope_Rep3 825.3439371230899 825.3433849679301 33.154 1 -1.6102449870008946 0.4203123042403672 1.0 ['ENST00000502262.4_1_5:96158677-96209374:-|nuORF'] 80134 5415 PKKKKPLKLGP True PC9_epitope_Rep1 1232.8332629750798 1232.83216993586 25.663 2 -1.6103074034649223 0.4203123042403672 1.0 ['ENSG00000104332|ENST00000220772|SFRP1'] 83500 4529 QDIEYIEIR True NCI_RA007_Epitope_Rep2 1177.5979028762897 1177.5968099358602 22.246 2 -1.6103363404021516 0.4203123042403672 1.0 ['nc|ENSG00000113522|Q92878-3|RAD50', 'ENSG00000113522|ENST00000378823|RAD50', 'nc|ENSG00000113522|Q92878-2|RAD50'] 120921 16708 VGEGAYGVVLK True PC9_epitope_Rep2 1090.60225998074 1090.60116993586 69.515 2 -1.6103575010655538 0.4203123042403672 1.0 ['ENSG00000008086|ENST00000623535|CDKL5', 'nc|ENSG00000008086|O76039-1|CDKL5'] 131554 14787 VVVLLSAE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 63.55 2 -1.6104249587345245 0.4203123042403672 1.0 ['PIK3AP1-TM9SF3|1|fusion', 'ENSG00000155629|ENST00000339364|PIK3AP1'] 18717 14481 ELDHLNFI True PC9_epitope_Rep5 999.50254593947 999.50144993586 60.702 2 -1.6104486251941108 0.4203123042403672 1.0 ['SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A'] 12375 7109 DKADLDLRLV True NCI_RA007_Epitope_Rep1 1156.64518742188 1156.6440899358602 31.643 2 -1.6104748417377905 0.4203123042403672 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1'] 80609 9300 PLPGRPCP True H1975_Epitope_Rep3 835.4374435851099 835.43689496793 40.767 1 -1.6104817381662668 0.4203123042403672 1.0 ['SVA_D_dup1229|chr17:30522805-30524227:+|1.1342495796522174|0.476847412502663|1.25|502.0|29|3|sense'] 122448 8185 VGSLPGGC True NCI_RA007_Epitope_Rep2 688.3214107733601 688.3208649679301 36.473 1 -1.6105647119862183 0.4203189066059225 1.0 ['ENST00000399455.2_2_11:11974336-11974396:+|nuORF'] 109290 9288 TGEAAGGAGEA True H1975_Epitope_Rep2 889.3777393491698 889.3771949679301 40.684 1 -1.6106071263709674 0.42032253655869894 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4', 'ENSG00000197978|ENST00000618348|GOLGA6L9', 'nc|ENSG00000197978|A6NEM1-2|GOLGA6L9'] 52562 19502 KPTKMLGTWVL True NCI_RA007_Epitope_Rep5 1272.72641494804 1272.72587496793 81.9 1 -1.6106813062181442 0.42032253655869894 1.0 ['ENST00000397269.7_1_10:5948371-5948467:+|nuORF'] 5049 16685 ALLHFLKEQR True PC9_epitope_Rep3 1253.72444080209 1253.72278490379 69.314 3 -1.6106879481047098 0.42032253655869894 1.0 ['nc|ENSG00000166947|P16452-2|EPB42', 'ENSG00000166947|ENST00000441366|EPB42', 'nc|ENSG00000166947|P16452-3|EPB42'] 127472 10389 VQTDQRVL True PC9_epitope_Rep4 957.5243440132099 957.52324993586 47.662 2 -1.610694893866793 0.42032253655869894 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000478085.5_1_22:40800171-40802852:+|nuORF'] 26848 21146 FLERKHRRK True PC9_epitope_Rep2 1268.7578066190397 1268.75670993586 86.793 2 -1.61086271115715 0.4203525714025418 1.0 ['nc|ENSG00000179119|Q68D10-2|SPTY2D1', 'ENSG00000179119|ENST00000336349|SPTY2D1', 'ENST00000536336.5_1_11:18633859-18655855:-|nuORF', 'SPTY2D1|p.P485Rfs*12|1|0.44|ENSG00000179119|chr11:18614820-18614820|G/-|frameshift_variant', 'nc|ENSG00000179119|Q68D10-3|SPTY2D1'] 133117 20987 WAYLVRFIQRN True H1975_Epitope_Rep2 1464.79900272468 1464.7973549037902 86.875 3 -1.610930132105081 0.4203525714025418 1.0 ['ENST00000369721.8_1_1:111992139-111998768:+|nuORF'] 122009 16559 VGQGVQAA True NCI_RA007_Epitope_Rep4 728.3817025307999 728.38115496793 71.775 1 -1.6109416455000545 0.4203525714025418 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 98322 22037 SIGIEEVF True PC9_epitope_Rep1 892.4541987647199 892.45310993586 89.579 2 -1.6109675148649318 0.4203525714025418 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'HYDIN|p.N3720Kfs*28|2|0.54|ENSG00000157423|chr16:70868720-70868721|-/T|frameshift_variant'] 78739 5992 PEGGFPPP True NCI_RA007_Epitope_Rep3 796.3755545211999 796.37444993586 30.548 2 -1.6110179630207344 0.4203525714025418 1.0 ['ENST00000593068.6_2_19:1010069-1010321:-|nuORF', 'ENST00000592618.5_1_19:1009676-1010321:-|nuORF'] 60577 7222 LIRQTSTHQLN True NCI_RA007_Epitope_Rep1 1309.7102472899298 1309.70914993586 32.081 2 -1.611068982184111 0.4203525714025418 1.0 ['MGAT4C|p.E58Q|1|0.18|ENSG00000182050|chr12:85983646-85983646|C/G|missense_variant'] 48138 26462 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 110.45 3 -1.6110721231865612 0.4203525714025418 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 36261 8645 GVGHSGIG True NCI_RA007_Epitope_Rep4 682.33983771882 682.3392849679301 40.036 1 -1.6110995570669742 0.4203525714025418 1.0 ['ALDH3B2|p.M329I|1|0.36|ENSG00000132746|chr11:67663386-67663386|C/A|missense_variant'] 70689 23436 MDKKAYFL True PC9_epitope_Rep2 1014.5208388558998 1014.51974993586 95.618 2 -1.6111299716615497 0.42035438540551623 1.0 ['ENST00000338086.9_1_2:20512115-20518378:-|nuORF'] 92906 22308 RRPGLRPEL True H1975_Epitope_Rep2 1092.651610215 1092.65050993586 92.191 2 -1.6111494818531396 0.42035438540551623 1.0 ['ENST00000440364.6_1_5:153826115-153832963:+|nuORF', 'ENST00000426761.2_1_5:153826115-153833002:+|nuORF', 'ENST00000297109.10_1_5:153825644-153830670:+|nuORF'] 113434 8762 TQNEGHPKW True H1975_Epitope_Rep2 1095.50975657823 1095.5086499358601 38.666 2 -1.611270524470514 0.4203837613164038 1.0 ['nc|ENSG00000079150|Q9Y680-1|FKBP7', 'ENST00000464248.1_1_2:179330632-179343265:-|nuORF', 'nc|ENSG00000079150|Q9Y680-3|FKBP7', 'ENSG00000079150|ENST00000424785|FKBP7'] 94128 23961 RWFKFRKRKGE True PC9_epitope_Rep1 1536.8789843808797 1536.87733490379 96.971 3 -1.6114232251249094 0.4204149490992735 1.0 ['nc|ENSG00000164542|Q8NCT3|MATCAP2'] 92960 23434 RRPRTRRNL True PC9_epitope_Rep1 1223.74355353723 1223.7424499358601 94.922 2 -1.611451495026427 0.4204149490992735 1.0 ['ENSG00000164125|ENST00000585682|GASK1B', 'nc|ENSG00000164125|Q6UWH4-2|GASK1B', 'GASK1B|p.A253Hfs*22|1|0.23|ENSG00000164125|chr4:158170619-158170619|C/-|frameshift_variant', 'nc|ENSG00000164125|Q6UWH4-3|GASK1B'] 49049 18885 KFLKKLNHREL True PC9_epitope_Rep2 1424.86160298124 1424.8599449037902 78.007 3 -1.6114740800948952 0.4204149490992735 1.0 ['ENST00000377325.1_1_6:28056349-28056487:+|nuORF'] 62527 24223 LLSVLSSFAA True H1975_Epitope_Rep2 1006.5698972232999 1006.56937496793 99.708 1 -1.6116298011160965 0.42041624920302395 1.0 ['GPR152|p.R307L|2|0.24|ENSG00000175514|chr11:67451805-67451805|C/A|missense_variant'] 92945 24663 RRPPPVNPGSV True PC9_epitope_Rep3 1174.65708951826 1174.6559899358601 100.23 2 -1.6117916295408885 0.42041624920302395 1.0 ['ENSG00000163659|ENST00000295924|TIPARP'] 119690 18916 VESYLQPKAK True PC9_epitope_Rep5 1161.6393737654496 1161.63826993586 77.781 2 -1.6118417542317052 0.42041624920302395 1.0 ['ENSG00000254093|ENST00000314787|PINX1'] 121739 17001 VGLRWRPL True H1975_Epitope_Rep3 995.6028691174299 995.60176993586 70.988 2 -1.611855488238149 0.42041624920302395 1.0 ['ENST00000592685.5_1_19:10570095-10570353:+|nuORF', 'ENST00000591971.5_1_19:10570113-10572229:+|nuORF'] 132667 17603 VYRDPGVLKQV True PC9_epitope_Rep5 1272.7190210684798 1272.7179299358602 72.719 2 -1.6118736419782904 0.42041624920302395 1.0 ['ENST00000474814.1_1_1:28907601-28907664:-|nuORF'] 32277 6084 GFRDWFEIQWI True NCI_RA007_Epitope_Rep2 1495.72483472491 1495.72318490379 28.272 3 -1.6119110294738817 0.42041624920302395 1.0 ['ENSG00000112619|ENST00000230381|PRPH2'] 12191 20875 DILYFLLRV True PC9_epitope_Rep5 1150.6750309981799 1150.67392993586 85.348 2 -1.6119712477143509 0.42041624920302395 1.0 ['ENSG00000187554|ENST00000642603|TLR5'] 133059 20938 VYVYIIKKT True H1975_Epitope_Rep2 1125.6797820254496 1125.6781349037901 86.684 3 -1.612018582794441 0.42041624920302395 1.0 ['ERV3-1|p.L237V|1|0.16|ENSG00000213462|chr7:64992318-64992318|G/C|missense_variant'] 89414 1476 REPDRRRRN True NCI_RA007_Epitope_Rep1 1253.6813472034898 1253.67970490379 7.8124 3 -1.6121415862626536 0.42041624920302395 1.0 ['ENST00000546566.5_1_12:53439831-53440826:-|nuORF'] 96348 22529 SEFMNYKA True NCI_RA007_Epitope_Rep5 988.4324177743199 988.43132993586 93.839 2 -1.6121535969597107 0.42041624920302395 1.0 ['ENST00000443945.6_1_13:47127426-47279607:+|nuORF', 'nc|ENSG00000136141|Q9Y2L9-2|LRCH1', 'nc|ENSG00000136141|Q9Y2L9|LRCH1', 'ENSG00000136141|ENST00000389797|LRCH1'] 88413 9276 QYRNFIFYFII True NCI_RA007_Epitope_Rep1 1522.7972713891797 1522.79616993586 40.079 2 -1.6121823823851273 0.42041624920302395 1.0 ['ENST00000452284.1_1_22:21356738-21362956:+|nuORF', 'ENST00000436079.1_1_22:21356738-21363657:+|nuORF', 'ENST00000429962.1_1_22:21356738-21357321:+|nuORF'] 20083 11473 ENGTLKRQLD True PC9_epitope_Rep1 1172.61494992276 1172.6138499358601 49.011 2 -1.6122084593717854 0.42041624920302395 1.0 ['ENSG00000118217|ENST00000367942|ATF6'] 49259 24609 KHAIVICN True H1975_Epitope_Rep3 896.49020743396 896.48965496793 102.4 1 -1.6123143200480494 0.42041624920302395 1.0 ['ENSG00000122218|ENST00000241704|COPA', 'ENST00000481522.1_1_1:160275221-160275586:-|nuORF'] 27537 23669 FPGYPIHV True NCI_RA007_Epitope_Rep5 928.4806882960798 928.47958993586 98.373 2 -1.612322025241559 0.42041624920302395 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L', 'STON1-GTF2A1L|p.P824Q|1|0.61|ENSG00000068781|chr2:48645088-48645088|C/A|missense_variant', 'STON1-GTF2A1L|p.P824L|1|0.33|ENSG00000068781|chr2:48645088-48645088|C/T|missense_variant', 'STON1-GTF2A1L|p.G826V|1|0.3|ENSG00000068781|chr2:48645094-48645094|G/T|missense_variant', 'STON1-GTF2A1L|p.A825T|1|0.12|ENSG00000068781|chr2:48645090-48645090|G/A|missense_variant'] 77844 5821 PAGCGGKG True NCI_RA007_Epitope_Rep2 645.29044499825 645.2898949679301 27.261 1 -1.612380880645366 0.4204180613429879 1.0 ['ENSG00000188895|ENST00000398532|MSL1'] 29508 25139 FVIFMFFLN True NCI_RA007_Epitope_Rep2 1176.6041745570399 1176.60253490379 105.87 3 -1.6123847330663823 0.4204180613429879 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 134663 19594 WWMFDYWKKNK True NCI_RA007_Epitope_Rep2 1630.7754903987795 1630.7743899358602 81.159 2 -1.6127355139115316 0.4204492412081469 1.0 ['PGM2L1|p.C368Y|1|0.32|ENSG00000165434|chr11:74345584-74345584|C/T|missense_variant'] 7623 23775 ASKTNFLLGVL True NCI_RA007_Epitope_Rep5 1161.6757592741699 1161.67411490379 98.802 3 -1.612749852290903 0.4204492412081469 1.0 ['nc|ENSG00000205754|G3V0H7|SLCO1B7', 'nc|ENSG00000257046|F5H094|SLCO1B3-SLCO1B7'] 130870 3143 VVGRLFQKWFP True PC9_epitope_Rep3 1375.7764763749497 1375.7748449037902 17.081 3 -1.612751363969486 0.4204492412081469 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 30471 8496 GAGKAGGH True H1975_Epitope_Rep1 653.32452200785 653.3239749679301 37.609 1 -1.6128411877055266 0.42045765027322407 1.0 ['ENST00000590830.5_1_19:1578341-1584901:-|nuORF'] 116707 9703 TYKMCPIPPK True NCI_RA007_Epitope_Rep3 1176.6035229340398 1176.60187490379 45.241 3 -1.6128689272224592 0.42045765027322407 1.0 ['ENSG00000172346|ENST00000306149|CSDC2'] 75598 8720 NQRWEWLAWWR True H1975_Epitope_Rep3 1629.7953143265697 1629.7942099358602 38.543 2 -1.6129057028036744 0.42045765027322407 1.0 ['ENST00000465124.1_1_9:127634977-127635226:+|nuORF'] 37704 22992 HAPALHLT True H1975_Epitope_Rep2 858.4711862415401 858.47008993586 94.887 2 -1.6129426151166086 0.4204594613055258 1.0 ['ENST00000308406.9_1_17:19284741-19284873:+|nuORF'] 53298 18841 KTLHAGSKALR True NCI_RA007_Epitope_Rep5 1180.7040397106798 1180.70239490379 79.318 3 -1.6129715542903096 0.4204594613055258 1.0 ['LRRC10|p.N154K|1|0.37|ENSG00000198812|chr12:69610377-69610377|G/T|missense_variant'] 52391 22957 KPGKMFVLR True PC9_epitope_Rep3 1074.6372060208198 1074.63610993586 93.568 2 -1.613062623553725 0.4204612722553618 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 23124 14566 EVMDLCHVVP True PC9_epitope_Rep3 1140.5307519166 1140.52964993586 61.155 2 -1.6130878938400677 0.4204612722553618 1.0 ['YAE1|p.D139V|1|0.26|ENSG00000241127|chr7:39572441-39572441|A/T|missense_variant'] 36519 23207 GVKLIKQRHE True PC9_epitope_Rep3 1206.7196897748202 1206.71858993586 94.54 2 -1.613231762038304 0.42046786954294496 1.0 ['nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'ENSG00000197748|ENST00000357060|CFAP43'] 62101 21397 LLNLVKEV True PC9_epitope_Rep2 926.58006798418 926.57896993586 87.774 2 -1.6132853683083785 0.42047446668032695 1.0 ['ENST00000376552.6_1_9:82186844-82187042:+|nuORF'] 63515 18754 LPKFIKTKM True PC9_epitope_Rep2 1104.6729228232 1104.6718299358602 77.513 2 -1.6133485229892284 0.4204762772060832 1.0 ['ENST00000233813.4_1_2:217540775-217540844:-|nuORF'] 133118 19550 WAYLVRFIQRN True NCI_RA007_Epitope_Rep3 1464.79900272468 1464.7973549037902 85.279 3 -1.6133579132503524 0.4204762772060832 1.0 ['ENST00000369721.8_1_1:111992139-111998768:+|nuORF'] 15370 16619 EALKRRWRWQQ True NCI_RA007_Epitope_Rep1 1555.84841252859 1555.84730993586 68.762 2 -1.6134864917976672 0.4205008537279454 1.0 ['ENSG00000169918|ENST00000307050|OTUD7A', 'nc|ENSG00000169918|Q8TE49|OTUD7A', 'nc|ENSG00000264522|Q6GQQ9-2|OTUD7B', 'ENSG00000264522|ENST00000581312|OTUD7B'] 112902 8892 TPQDTLSVP True NCI_RA007_Epitope_Rep4 956.4814761417199 956.48036993586 41.028 2 -1.613530032089825 0.4205008537279454 1.0 ['ENST00000568229.5_1_15:74212299-74212341:-|nuORF'] 32362 5283 GGDEWEWSWA True PC9_epitope_Rep5 1221.4727023631701 1221.4710449037902 25.337 3 -1.6135387682190818 0.4205074501143982 1.0 ['ENST00000531791.1_1_11:65149760-65149886:-|nuORF'] 56318 7874 LDRCLVHML True PC9_epitope_Rep1 1098.5678061316598 1098.5667099358602 35.113 2 -1.6136271509659166 0.4205368119109411 1.0 ['ENST00000428642.1_1_1:225635121-225653038:-|nuORF'] 34210 16029 GPISMNHGV True H1975_Epitope_Rep1 910.4330864806599 910.4325349679301 66.991 1 -1.6137226451453208 0.42054521654999716 1.0 ['DOP1A|p.S1083Vfs*21|1|0.18|ENSG00000083097|chr6:83137286-83137288|CTA/TT|frameshift_variant', 'ENSG00000083097|ENST00000349129|DOP1A'] 49226 26089 KGRGGENR True PC9_epitope_Rep2 872.45766143572 872.45656993586 106.29 2 -1.6137293454301305 0.42054521654999716 1.0 ['ENST00000265735.11_1_7:94285424-94285505:-|nuORF'] 39317 20577 HLRRCLHHP True NCI_RA007_Epitope_Rep5 1167.6195988940701 1167.6179549037902 86.09 3 -1.6137386103427773 0.42054521654999716 1.0 ['ENST00000532851.1_1_1:110171948-110172194:+|nuORF'] 6550 6568 APVMAVVR True PC9_epitope_Rep3 841.4843937775299 841.48328993586 30.287 2 -1.6138196322653846 0.4205811716767019 1.0 ['HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'HECTD4|p.L4139Rfs*75|1|0.23|ENSG00000173064|chr12:112167429-112167429|A/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4', 'HECTD4|p.S2551Rfs*13|1|0.12|ENSG00000173064|chr12:112210198-112210225|GCCCTTCCGCGTAGGCAAACGGCCGGGA/-|frameshift_variant', 'nc|ENSG00000173064|Q9Y4D8-2|HECTD4', 'ENST00000547519.1_1_12:112664623-112666579:-|nuORF'] 10285 21965 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 95.247 2 -1.6138915585535187 0.4205811716767019 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 53523 7839 KVPEKLAA True PC9_epitope_Rep3 854.5225531080598 854.52144993586 35.141 2 -1.6141104097380028 0.42063329463452387 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 122936 14270 VGVVRESIIR True PC9_epitope_Rep6 1126.6822416369398 1126.68114993586 66.781 2 -1.6142204403075067 0.420651270786146 1.0 ['nc|ENSG00000185880|Q86WT6-4|TRIM69', 'nc|ENSG00000185880|Q86WT6-3|TRIM69', 'nc|ENSG00000185880|Q86WT6-2|TRIM69', 'ENSG00000185880|ENST00000329464|TRIM69'] 26614 3186 FKMCLNYEVR True H1975_Epitope_Rep1 1301.62604928377 1301.62441490379 16.195 3 -1.6143330007781953 0.42068062827225133 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC', 'ENST00000358378.6_11:1212786-1216326:+|nuORF'] 120427 10393 VFTMIDIF True PC9_epitope_Rep2 984.4990407821599 984.49794993586 45.299 2 -1.614376238960476 0.42068243381666703 1.0 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A', 'GPM6A|p.D73V|1|0.28|ENSG00000150625|chr4:175701587-175701587|T/A|missense_variant'] 78241 7568 PAQHDQLMQK True PC9_epitope_Rep2 1194.5815416194998 1194.5798849037901 34.481 3 -1.6144352268812379 0.42068243381666703 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF', 'ENST00000537363.5_1_19:10664629-10670250:-|nuORF'] 95826 8370 SDHFHSEETEE True H1975_Epitope_Rep1 1345.50585296625 1345.5047499358602 37.123 2 -1.6145840630532253 0.42068423927888554 1.0 ['ENSG00000115183|ENST00000263635|TANC1', 'nc|ENSG00000115183|Q9C0D5-2|TANC1', 'ENST00000470074.1_1_2:160076105-160087520:+|nuORF'] 140284 14486 YYDDEKEKL True NCI_RA007_Epitope_Rep2 1201.5502839775297 1201.54918993586 61.009 2 -1.614586995589372 0.42068423927888554 1.0 ['ENSG00000149257|ENST00000358171|SERPINH1'] 27581 24362 FPRKPGKRQ True H1975_Epitope_Rep2 1112.6566955954397 1112.65558993586 100.24 2 -1.6146543547886663 0.4206908325271724 1.0 ['ENST00000606961.1_1_6:33664022-33664205:-|nuORF'] 112935 6213 TPRDPDKE True PC9_epitope_Rep3 956.4563240230399 956.45522993586 28.938 2 -1.6146843766046257 0.4207088065918558 1.0 ['ENSG00000177992|ENST00000325643|SPATA31E1'] 28582 16624 FSNSNRHEI True PC9_epitope_Rep6 1102.5155702346601 1102.51446993586 76.409 2 -1.6148203232021001 0.4207381610843661 1.0 ['nc|ENSG00000105750|Q03923-2|ZNF85', 'ENSG00000105750|ENST00000328178|ZNF85'] 119556 9699 VERFRYGW True PC9_epitope_Rep2 1111.5563128478298 1111.5552099358601 42.647 2 -1.6149330778810094 0.42075016500899015 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1', 'nc|ENSG00000167525|Q8NCQ7-3|PROCA1'] 33705 15472 GLQMASRYTV True PC9_epitope_Rep2 1124.5648289261999 1124.56372993586 64.79 2 -1.6149703593540217 0.42075016500899015 1.0 ['ENST00000587413.5_1_19:37288433-37288667:+|nuORF'] 128729 4278 VSPPTHGR True NCI_RA007_Epitope_Rep3 849.44569976969 849.44460993586 23.542 2 -1.6149797379502584 0.42075016500899015 1.0 ['nc|ENSG00000101901|Q9NP73-4|ALG13', 'nc|ENSG00000101901|Q9NP73-3|ALG13', 'ENSG00000101901|ENST00000394780|ALG13'] 90776 18925 RKRQRRHG True NCI_RA007_Epitope_Rep3 1092.6489248763999 1092.64782993586 82.727 2 -1.6150153432331562 0.42075016500899015 1.0 ['ENST00000425046.1_1_3:4345037-4358927:+|nuORF'] 120602 10953 VGAGCNTK True H1975_Epitope_Rep3 748.3537735308 748.35322496793 47.219 1 -1.6150297032309993 0.42075016500899015 1.0 ['ENST00000521429.5_1_8:86114393-86119660:+|nuORF', 'nc|ENSG00000133740|Q15329-2|E2F5', 'ENSG00000133740|ENST00000416274|E2F5'] 14699 5946 DVQALFLCCI True PC9_epitope_Rep2 1123.54058832431 1123.53895490379 28.262 3 -1.6150397243058994 0.42075016500899015 1.0 ['ENST00000333039.2_2_22:39215633-39216080:-|nuORF'] 32128 14053 GEYSLFQK True NCI_RA007_Epitope_Rep2 970.47599683846 970.47544496793 59.322 1 -1.6150834201088087 0.42075016500899015 1.0 ['OVCH1|p.G704Efs*9|1|0.31|ENSG00000187950|chr12:29464521-29464521|C/-|frameshift_variant', 'ENSG00000187950|ENST00000537054|OVCH1', 'nc|ENSG00000187950|Q7RTY7|OVCH1', 'OVCH1|p.A576Rfs*47|1|0.44|ENSG00000187950|chr12:29471933-29471934|-/A|frameshift_variant'] 96060 22080 SEAQKIREL True PC9_epitope_Rep6 1072.58767254576 1072.58656993586 97.865 2 -1.6151171816344918 0.42076813655761025 1.0 ['ENST00000525968.1_1_11:73984627-74015361:-|nuORF', 'ENSG00000149380|ENST00000331597|P4HA3', 'nc|ENSG00000149380|Q7Z4N8-3|P4HA3', 'ENST00000531716.1_1_11:73996688-73997284:-|nuORF'] 59001 10348 LGALAARFP True H1975_Epitope_Rep2 914.5337864981 914.5332349679301 44.813 1 -1.615225715748586 0.42077472802585464 1.0 ['ENST00000348261.10_1_16:1271144-1271678:+|nuORF'] 48097 28090 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 118.59 3 -1.615243232262255 0.4207813193440832 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 122429 20231 VGSKPGMN True PC9_epitope_Rep1 788.38507365908 788.38396993586 82.649 2 -1.6152540375956943 0.42078791051230113 1.0 ['ENSG00000149480|ENST00000278823|MTA2', 'nc|ENSG00000149480|O94776-2|MTA2'] 59004 17798 LGALKELHE True PC9_epitope_Rep6 1008.56039516876 1008.55928993586 81.094 2 -1.6152672948504854 0.42079213553459477 1.0 ['nc|ENSG00000165383|Q8N456-2|LRRC18', 'ENSG00000165383|ENST00000374160|LRRC18'] 109251 8717 TFYIAPSPG True NCI_RA007_Epitope_Rep1 951.4701831820298 951.46908993586 37.91 2 -1.6152925534415032 0.42079213553459477 1.0 ['ENST00000532245.5_1_11:57529333-57563148:+|nuORF'] 107000 21828 SYLFTCRFL True PC9_epitope_Rep1 1148.5688516774799 1148.56774993586 88.772 2 -1.6154526932958024 0.42079213553459477 1.0 ['ENST00000567791.1_1_16:66955609-66957656:-|nuORF'] 76884 23600 NVIWFYYRFN True PC9_epitope_Rep3 1420.6928063206399 1420.6917099358602 96.063 2 -1.6155661699085444 0.42079213553459477 1.0 ['ENST00000361671.9_1_9:88637014-88637161:+|nuORF'] 35124 14927 GRVAHQGP True PC9_epitope_Rep2 820.4303840587199 820.42928993586 62.678 2 -1.615586151003284 0.42079213553459477 1.0 ['ENST00000573080.1_1_17:79658404-79658602:+|nuORF'] 127683 22225 VRGFLLCA True PC9_epitope_Rep4 877.4843937775299 877.48328993586 93.727 2 -1.6156042882397048 0.42079213553459477 1.0 ['ENST00000329073.8_1_12:132627816-132627993:-|nuORF'] 130319 23751 VTTRLPVPRA True NCI_RA007_Epitope_Rep3 1108.6716769532397 1108.67117496793 102.95 1 -1.6156534371769515 0.42079213553459477 1.0 ['nc|ENSG00000171681|Q6VMQ6-5|ATF7IP', 'ENSG00000171681|ENST00000261168|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-4|ATF7IP', 'nc|ENSG00000171681|Q6VMQ6-2|ATF7IP'] 3096 16595 AGALPPDY True NCI_RA007_Epitope_Rep2 802.3861192049001 802.3855749679301 69.281 1 -1.6156617495714416 0.42079213553459477 1.0 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.W3587Cfs*14|1|0.26|ENSG00000198626|chr1:237727121-237727121|G/-|frameshift_variant', 'RYR3|p.L4574Wfs*13|1|0.21|ENSG00000198838|chr15:33853604-33853604|T/-|frameshift_variant', 'RYR3|p.L4622Sfs*34|1|0.37|ENSG00000198838|chr15:33854769-33854769|T/-|frameshift_variant', 'nc|ENSG00000198838|Q15413-2|RYR3', 'ENSG00000198838|ENST00000634891|RYR3', 'nc|ENSG00000198838|Q15413-3|RYR3', 'RYR3|p.M3643Wfs*6|1|0.47|ENSG00000198838|chr15:33821533-33821533|C/-|frameshift_variant', 'RYR3|p.V3486Lfs*23|1|0.16|ENSG00000198838|chr15:33813536-33813560|GTGGTGGCCTGTTTCAGGATGGCCC/-|frameshift_variant', 'RYR1|p.R4174Pfs*35|1|0.31|ENSG00000196218|chr19:38561349-38561352|CCGC/-|frameshift_variant', 'nc|ENSG00000196218|P21817-3|RYR1', 'nc|ENSG00000196218|P21817-2|RYR1', 'ENSG00000196218|ENST00000359596|RYR1'] 2983 25346 AFLLRSRLLH True H1975_Epitope_Rep3 1224.7455105998401 1224.7438649037902 105.43 3 -1.6157092464017735 0.42079213553459477 1.0 ['ENST00000462326.5_1_7:55503854-55639964:-|nuORF', 'ENST00000453256.5_1_7:55540449-55583655:-|nuORF', 'ENST00000428648.5_1_7:55540449-55639414:-|nuORF', 'ENST00000418904.5_1_7:55540449-55620397:-|nuORF'] 29920 25997 FWPANHNPF True NCI_RA007_Epitope_Rep1 1128.5141136826799 1128.51247490379 107.6 3 -1.615727256809737 0.42079213553459477 1.0 ['ENST00000559694.5_1_14:24530033-24530297:+|nuORF'] 118765 11204 VEDSRTGLPP True H1975_Epitope_Rep1 1069.54038800017 1069.53928993586 48.065 2 -1.6157657811215442 0.42079213553459477 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2'] 55402 17290 LASVQSGK True H1975_Epitope_Rep3 788.4392174069199 788.43812993586 72.154 2 -1.6158044656999873 0.42079872567982707 1.0 ['chr10:5010653-5014903|259|20.02|0.04|8.85|-|1|AKR1C2,AKR1C2|1'] 69795 17842 LWRRRGALRFR True NCI_RA007_Epitope_Rep1 1485.8905521240897 1485.88944993586 73.54 2 -1.615930121251745 0.4208280711335632 1.0 ['chr15:53523322-53684228|265|18.12|0.04|8.74|-|0|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|111', 'chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|75', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|288|2|anti-sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|347|3|anti-sense', 'chr8:91197524-91200613|289|13.1|0.22|5.87|+|2|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|98', 'chr8:127290060-127311920|196|16.7|0.02|9.43|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|62', 'chr8:127290060-127311835|257|24.31|0.0|12.5|-|1|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311835,127315431|CASC8,None|62', 'chr6:83315413-83334213|140|10.1|0.0|19.95|-|0|TE_info:L1HS,L1HS_dup688,L1,LINE,donor,+,83334213,83339981|ME1,None|110', 'chr6:109250991-109254448|382|11.17|0.13|6.42|+|2|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|77', 'chr5:90822097-90965415|264|32.48|0.18|7.5|+|0|TE_info:L1PA4,L1PA4_dup3961,L1,LINE,donor,-,90816414,90822097|None,ADGRV1|114', 'chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|121', 'chr14:58012150-58032884|335|10.01|0.03|8.51|-|2|TE_info:L1PA2,L1PA2_dup4307,L1,LINE,donor,+,58032884,58038561|ARMH4,None|93'] 49578 25382 KKKKGGGG True PC9_epitope_Rep4 758.4762716219798 758.47516993586 106.53 2 -1.6162048412712142 0.4208801711191007 1.0 ['nc|ENSG00000100490|Q00532-2|CDKL1'] 71155 19570 MEVEQYRRERE True H1975_Epitope_Rep3 1523.7150749701898 1523.7139699358602 81.997 2 -1.616341395855824 0.4208885602138916 1.0 ['ENST00000481998.1_1_6:31513879-31514336:-|nuORF', 'nc|ENSG00000213760|O95670-3|ATP6V1G2', 'ENSG00000213760|ENST00000303892|ATP6V1G2', 'ENST00000475917.1_1_6:31510065-31514336:-|nuORF'] 33084 7932 GKGRYGEVW True NCI_RA007_Epitope_Rep4 1050.52467836638 1050.5235899358602 37.253 2 -1.6164043816870453 0.4208885602138916 1.0 ['ENSG00000138696|ENST00000515059|BMPR1B', 'nc|ENSG00000138696|O00238-2|BMPR1B', 'ENSG00000139567|ENST00000388922|ACVRL1'] 86541 26022 QRAPKPLPRV True PC9_epitope_Rep3 1160.71421047156 1160.71310993586 105.95 2 -1.6164816998468086 0.4208885602138916 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 82865 9510 PVVGDRLK True PC9_epitope_Rep1 882.5287011176599 882.52760993586 41.435 2 -1.6165242080867546 0.4208951488122326 1.0 ['ENSG00000100994|ENST00000216962|PYGB'] 33722 11454 GLRGKHHVI True PC9_epitope_Rep6 1015.6039317465901 1015.60282993586 55.118 2 -1.6166976559349167 0.42090353701407296 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B', 'ENST00000504041.1_1_5:169407-179718:+|nuORF'] 51903 1472 KKRRNWKR True NCI_RA007_Epitope_Rep1 1170.7210271874999 1170.71938490379 7.7979 3 -1.6167565367766537 0.42090353701407296 1.0 ['ENST00000438017.5_1_3:42653847-42674179:-|nuORF'] 44637 11179 IPITNTYKEF True H1975_Epitope_Rep1 1224.6390394122798 1224.6379499358602 47.968 2 -1.6167851107243696 0.42090353701407296 1.0 ['ENSG00000092140|ENST00000206595|G2E3', 'ENST00000549159.1_1_14:31081376-31085737:+|nuORF', 'ENST00000468439.2_1_3:132107728-132107881:+|nuORF'] 31608 14428 GEGEPCGG True NCI_RA007_Epitope_Rep5 704.2435543754799 704.24300496793 62.178 1 -1.6169166869288945 0.4209233009487839 1.0 ['nc|ENSG00000163453|Q16270-2|IGFBP7', 'ENSG00000163453|ENST00000295666|IGFBP7', 'IGFBP7-SPINK2|1|fusion'] 48865 9554 KESQVDELNIW True NCI_RA007_Epitope_Rep2 1359.6670450652698 1359.66594993586 41.777 2 -1.616930421871724 0.4209233009487839 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 105672 15488 SVFYTIYT True NCI_RA007_Epitope_Rep5 992.485498893 992.48440993586 66.269 2 -1.6169321643973356 0.4209233009487839 1.0 ['nc|ENSG00000176290|Q96R72|OR4K3'] 125657 15603 VMMTASHL True PC9_epitope_Rep5 888.41974491564 888.41864993586 65.028 2 -1.6169904181286752 0.42094126480324906 1.0 ['ENSG00000196664|ENST00000380659|TLR7'] 46854 10424 IVGAPEPR True H1975_Epitope_Rep1 837.4708518883699 837.46974993586 45.049 2 -1.6170484124213702 0.4209478522024026 1.0 ['NACC1|p.K42Sfs*115|1|0.3|ENSG00000160877|chr19:13135332-13135333|AG/-|frameshift_variant'] 62235 14612 LLQAFAKY True H1975_Epitope_Rep2 952.5382031721999 952.53710993586 61.364 2 -1.6170983542720225 0.42094965076331536 1.0 ['SNAPC4|p.V416F|1|0.1|ENSG00000165684|chr9:136387564-136387564|C/A|missense_variant'] 28230 24565 FRRYLSVFF True PC9_epitope_Rep2 1233.66586329681 1233.66421490379 100.11 3 -1.6171455956306084 0.42094965076331536 1.0 ['ENSG00000121807|ENST00000445132|CCR2'] 130766 11474 VVDTVLAL True NCI_RA007_Epitope_Rep3 828.4956696538799 828.49456993586 52.251 2 -1.6172118675839868 0.42096761350063133 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 28532 7382 FSHSLVNI True NCI_RA007_Epitope_Rep3 915.48141657207 915.48030993586 36.164 2 -1.617386798736799 0.42097420030031396 1.0 ['ENST00000463367.1_1_2:99137735-99137873:+|nuORF'] 122977 7351 VGWRGTGSGKL True PC9_epitope_Rep2 1116.60399131624 1116.60288993586 33.656 2 -1.6177403749468464 0.42102090489297334 1.0 ['ENST00000370406.7_1_X:149106790-149106904:-|nuORF'] 90914 6244 RLEECHPSGCL True H1975_Epitope_Rep3 1242.54852723906 1242.54742993586 29.029 2 -1.6177777539353746 0.42102090489297334 1.0 ['ANO4|p.L732Qfs*8|1|0.35|ENSG00000151572|chr12:101110449-101110449|T/-|frameshift_variant', 'nc|ENSG00000151572|Q32M45-2|ANO4', 'ENSG00000151572|ENST00000392977|ANO4', 'nc|ENSG00000151572|Q32M45-3|ANO4', 'nc|ENSG00000134343|Q9BYT9-2|ANO3', 'ENSG00000134343|ENST00000256737|ANO3'] 36572 20495 GVLENIFGV True PC9_epitope_Rep2 946.5123823471798 946.51128993586 84.264 2 -1.6177960062693097 0.42102090489297334 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 138437 16665 YREGRRRA True PC9_epitope_Rep5 1062.5795079038999 1062.57897496793 69.107 1 -1.6178526276290623 0.42102090489297334 1.0 ['ENST00000357066.7_1_19:2085254-2096298:-|nuORF'] 30690 13422 GALPPRHL True PC9_epitope_Rep6 859.50282072299 859.50172993586 63.309 2 -1.617935599745608 0.42102090489297334 1.0 ['ENSG00000150471|ENST00000683033|ADGRL3', 'ADGRL3|p.F1011Vfs*28|1|0.11|ENSG00000150471|chr4:61983397-61983407|TTTCGCTGCCC/-|frameshift_variant', 'ADGRL3|p.Y189*|1|0.24|ENSG00000150471|chr4:61676919-61676919|T/-|frameshift_variant'] 16241 12791 EEGRGGNM True NCI_RA007_Epitope_Rep5 848.3446653990799 848.34356993586 55.881 2 -1.6179422395755616 0.42102090489297334 1.0 ['nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8', 'ENSG00000153339|ENST00000283351|TRAPPC8'] 138493 13951 YRHTHLDDP True NCI_RA007_Epitope_Rep5 1152.5312202987998 1152.52957490379 60.346 3 -1.6179643453321149 0.42102090489297334 1.0 ['nc|ENSG00000158987|Q8TEU7-5|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-3|RAPGEF6', 'ENSG00000158987|ENST00000509018|RAPGEF6', 'nc|ENSG00000158987|Q8TEU7-4|RAPGEF6'] 79613 23721 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 98.585 2 -1.6180232689992218 0.42102090489297334 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 130788 15979 VVENIMAG True H1975_Epitope_Rep2 831.4160394341899 831.41494993586 66.663 2 -1.6180780239562202 0.42102090489297334 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-6|CDH23', 'CDH23|p.S944Rfs*45|1|0.39|ENSG00000107736|chr10:71705009-71705009|C/-|frameshift_variant'] 46345 24639 ITGDLIATR True H1975_Epitope_Rep2 958.54474510462 958.54364993586 101.33 2 -1.6180914520938277 0.42102090489297334 1.0 ['ENST00000345046.10_1_X:152966127-152966343:-|nuORF'] 119568 7612 VERHHPGA True H1975_Epitope_Rep3 901.45184777929 901.45074993586 34.26 2 -1.6181021478615547 0.42102090489297334 1.0 ['ENST00000263266.3_1_19:49114075-49116267:-|nuORF'] 122659 16425 VGTPTVFKPQ True PC9_epitope_Rep3 1072.59169529704 1072.5905899358602 68.315 2 -1.6181568404415576 0.42102090489297334 1.0 ['MKI67|p.I2234V|1|0.56|ENSG00000148773|chr10:128105140-128105140|T/C|missense_variant'] 122008 16479 VGQGVQAA True NCI_RA007_Epitope_Rep4 728.3817025307999 728.38115496793 71.437 1 -1.6181769081055215 0.42102090489297334 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 110261 9268 TIFLSVRN True NCI_RA007_Epitope_Rep5 948.53926580136 948.53816993586 42.297 2 -1.6181958372806058 0.42102090489297334 1.0 ['ENST00000494069.1_1_3:197566242-197575018:+|nuORF'] 18513 10391 EKQFKAFRRGF True NCI_RA007_Epitope_Rep3 1412.7677025963997 1412.76660993586 47.93 2 -1.6182038715540104 0.42102748996280837 1.0 ['nc|ENSG00000114062|Q05086|UBE3A', 'nc|ENSG00000114062|Q05086-2|UBE3A', 'ENSG00000114062|ENST00000648336|UBE3A'] 10977 25090 DCQFRHPQV True NCI_RA007_Epitope_Rep3 1128.51346205968 1128.51181490379 108.45 3 -1.6182727222325206 0.4210340748828534 1.0 ['ENST00000598766.1_1_19:42822030-42825243:+|nuORF', 'ENST00000301204.7_1_19:42822030-42827838:+|nuORF'] 19537 12696 ELQRHARTH True PC9_epitope_Rep1 1146.6006372713 1146.59954993586 53.707 2 -1.618391369994087 0.4210699906739758 1.0 ['nc|ENSG00000167182|Q02086-2|SP2', 'ENSG00000167182|ENST00000376741|SP2'] 9333 15943 AVSTDYKKL True PC9_epitope_Rep6 1023.56006081559 1023.5589699358601 73.621 2 -1.6184331939857002 0.4210699906739758 1.0 ['ENSG00000185633|ENST00000554503|NDUFA4L2', 'ENST00000555173.1_1_12:57629348-57630441:-|nuORF'] 120436 28307 VFTQYNKPFF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 119.74 3 -1.618518126510996 0.421076574885985 1.0 ['ENSG00000115084|ENST00000245680|SLC35F5', 'nc|ENSG00000115084|Q8WV83-2|SLC35F5', 'ENST00000498768.1_1_2:114500256-114514010:-|nuORF'] 83540 16130 QDLQRHWL True PC9_epitope_Rep5 1094.56212650426 1094.56102993586 67.034 2 -1.6186306208134724 0.42109453188972795 1.0 ['ENST00000462722.5_1_9:131597926-131600079:-|nuORF'] 91339 24257 RMKRRRRWI True PC9_epitope_Rep2 1356.8149446556797 1356.8138499358602 98.846 2 -1.6188007881944728 0.42113523410933823 1.0 ['ENST00000257749.8_2_6:90661229-90661412:-|nuORF'] 20696 16516 EQIRLAGRQPQ True NCI_RA007_Epitope_Rep2 1294.7105816430997 1294.7094899358601 68.972 2 -1.6189794999592952 0.42114181735471395 1.0 ['ENST00000517479.1_1_X:47077465-47077851:+|nuORF'] 95947 4778 SDYSFSVIAMS True PC9_epitope_Rep2 1205.52744035797 1205.52634993586 23.746 2 -1.618997639472058 0.4211484004503531 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 15933 23004 EDSNAQEIK True PC9_epitope_Rep6 1032.4723680099999 1032.4712699358602 101.58 2 -1.6192128703802307 0.4211663558204067 1.0 ['ENSG00000118961|ENST00000237822|LDAH', 'nc|ENSG00000118961|Q9H6V9-2|LDAH'] 38398 6929 HGKEDIKV True PC9_epitope_Rep5 924.5028802926399 924.50178993586 31.622 2 -1.619296619025389 0.42117293848725734 1.0 ['ENSG00000132915|ENST00000255266|PDE6A'] 133651 24051 WKNFKEHH True PC9_epitope_Rep4 1124.55156182056 1124.55046993586 100.98 2 -1.619523553365087 0.4212250096663407 1.0 ['ENSG00000100867|ENST00000250383|DHRS2'] 122180 10424 VGRKTALH True NCI_RA007_Epitope_Rep3 880.52428444356 880.52318993586 48.072 2 -1.6196406391789513 0.42124954512372637 1.0 ['nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF', 'nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6'] 35362 5367 GTALLRSAA True PC9_epitope_Rep4 858.49231560894 858.49120993586 27.365 2 -1.619677110988283 0.42124954512372637 1.0 ['ENST00000322313.8_1_2:128458821-128459556:-|nuORF'] 78545 7248 PDMARAAV True PC9_epitope_Rep3 829.4116227600899 829.41052993586 32.89 2 -1.6197120793924396 0.4212561265451403 1.0 ['ENSG00000137675|ENST00000260229|MMP27'] 71601 6319 MLKQMLFRYQ True NCI_RA007_Epitope_Rep4 1356.70463395764 1356.70297490379 30.91 3 -1.6197776066046905 0.42126928893892357 1.0 ['ENSG00000136930|ENST00000259457|PSMB7'] 29909 5158 FWFTTKSWKPS True H1975_Epitope_Rep3 1413.70812203161 1413.7070299358602 24.945 2 -1.619820783783177 0.42126928893892357 1.0 ['ENSG00000133019|ENST00000676153|CHRM3', 'chr1:239629539-239632224|442|11.63|0.02|9.23|+|ENST00000255380|CHRM3,CHRM3'] 123011 22131 VGYARILF True PC9_epitope_Rep3 937.5385375253699 937.53744993586 90.425 2 -1.6199179500563436 0.42129861269047075 1.0 ['ENSG00000049239|ENST00000377403|H6PD', 'nc|ENSG00000049239|O95479-2|H6PD'] 2973 15866 AFKLKEIA True PC9_epitope_Rep6 918.5538532363398 918.55274993586 73.303 2 -1.6199510548104195 0.4213051932545684 1.0 ['nc|ENSG00000100888|Q9HCK8-2|CHD8', 'ENSG00000100888|ENST00000646647|CHD8', 'ENST00000555301.1_1_14:21862382-21863168:-|nuORF'] 14400 7277 DTGLLGFWTLL True H1975_Epitope_Rep1 1234.65977485686 1234.6586699358602 33.002 2 -1.6201397565682663 0.4213590466660602 1.0 ['ENSG00000177917|ENST00000326446|ARL6IP6'] 93005 19805 RRRALSAFV True NCI_RA007_Epitope_Rep5 1074.6410455312998 1074.6399499358602 83.09 2 -1.6201893313445725 0.4213590466660602 1.0 ['ENST00000262305.8_2_16:475669-476173:+|nuORF'] 99787 11394 SLGQYTSI True PC9_epitope_Rep5 867.43379767331 867.43270993586 48.825 2 -1.6202022081972458 0.4213590466660602 1.0 ['ENSG00000157103|ENST00000287766|SLC6A1'] 125488 5204 VLVIKARKLPP True PC9_epitope_Rep1 1232.8332629750798 1232.83216993586 24.867 2 -1.6204735910807633 0.4213608350578764 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 15132 14333 EAEKLVTYY True H1975_Epitope_Rep3 1114.55464108198 1114.5540749679299 60.479 1 -1.6204765023159267 0.4213608350578764 1.0 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'TBC1D8|p.Q225Rfs*11|2|0.43|ENSG00000204634|chr2:101050556-101050556|C/-|frameshift_variant'] 58185 17044 LESLPAHLPRS True H1975_Epitope_Rep1 1218.67207087606 1218.67096993586 70.985 2 -1.6205788658268767 0.4214015259190194 1.0 ['ENSG00000126861|ENST00000247271|OMG'] 111312 12230 TLHRVPAP True PC9_epitope_Rep2 889.5133854066898 889.5122899358599 52.354 2 -1.6207128738277503 0.4214081047891936 1.0 ['ENSG00000129028|ENST00000249861|THAP10'] 71667 3844 MLSSQDVV True PC9_epitope_Rep5 877.42151873745 877.4204299358599 19.868 2 -1.6209638486762918 0.4214601644134669 1.0 ['ENSG00000123066|ENST00000281928|MED13L'] 57483 10924 LEKIERTV True PC9_epitope_Rep1 986.5760452329 986.57494993586 46.905 2 -1.6211516914870168 0.4214781125639568 1.0 ['ENST00000473479.5_1_2:242274588-242275589:+|nuORF'] 112223 11004 TLWPSREV True PC9_epitope_Rep5 986.5185303567799 986.51742993586 47.315 2 -1.6213699564509503 0.4215415401757797 1.0 ['ENST00000546324.1_1_11:73018936-73020108:-|nuORF'] 89090 23083 REETKKKI True PC9_epitope_Rep4 1030.6134933707797 1030.6123899358602 97.011 2 -1.6214406405088877 0.4215546939842871 1.0 ['nc|ENSG00000167257|Q8ND24-2|RNF214', 'ENSG00000167257|ENST00000300650|RNF214'] 95338 11965 SAGHSGNN True H1975_Epitope_Rep3 742.2994294588201 742.29888496793 51.181 1 -1.6214517844201508 0.4215546939842871 1.0 ['ENSG00000125266|ENST00000646441|EFNB2'] 128722 5400 VSPKTQRVI True H1975_Epitope_Rep2 1026.6185787512197 1026.61748993586 25.804 2 -1.6217590363214036 0.4216294881415285 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant'] 129626 6732 VTGYRDPYTEQ True H1975_Epitope_Rep1 1327.6044448087098 1327.60334993586 30.937 2 -1.6219861537473348 0.4216767474646414 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC'] 48119 28424 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 118.91 3 -1.6220324257247125 0.4216767474646414 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 90393 15321 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 64.089 3 -1.6220952529419266 0.4216898974510562 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 84048 10762 QEQASSGWGS True H1975_Epitope_Rep2 1035.4257521707498 1035.42464993586 46.425 2 -1.6221090746316182 0.4216898974510562 1.0 ['ENSG00000102981|ENST00000458121|PARD6A', 'nc|ENSG00000102981|Q9NPB6|PARD6A'] 94171 18541 RWLEKEERFLK True PC9_epitope_Rep4 1532.8463468399198 1532.84524993586 79.392 2 -1.6224769897622329 0.42172276980093903 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 101717 10078 SPGPKGIA True NCI_RA007_Epitope_Rep5 725.40718900265 725.4066449679301 45.401 1 -1.6224855095605475 0.42172276980093903 1.0 ['ENST00000480127.1_1_10:105815115-105815723:-|nuORF'] 36441 23452 GVIIYIMKHSL True PC9_epitope_Rep1 1272.72641494804 1272.72587496793 94.992 1 -1.62252464202121 0.42172276980093903 1.0 ['ENSG00000175283|ENST00000372586|DOLK'] 120373 21939 VFRRDQRL True PC9_epitope_Rep1 1088.6203100867199 1088.61920993586 89.206 2 -1.6225832886607496 0.42172276980093903 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 30283 11188 GAAPNIQG True NCI_RA007_Epitope_Rep2 726.36605246666 726.3655049679301 48.101 1 -1.6226458223187956 0.42172276980093903 1.0 ['ENST00000494735.1_1_7:142960709-142960961:+|nuORF'] 92845 23244 RRLLLALHRR True PC9_epitope_Rep6 1302.8472903297798 1302.8461899358601 102.51 2 -1.6226649876216084 0.42172934382247285 1.0 ['ENSG00000140323|ENST00000267889|DISP2'] 91020 17713 RLKQEKRDEKR True NCI_RA007_Epitope_Rep1 1484.8535574786795 1484.8524699358602 73.037 2 -1.6227657204712733 0.4217359176945376 1.0 ['nc|ENSG00000226266|Q9UIF8-4|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-2|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-5|BAZ2B', 'nc|ENSG00000226266|Q9UIF8-3|BAZ2B', 'ENSG00000123636|ENST00000392783|BAZ2B'] 133461 24286 WGLSLERP True H1975_Epitope_Rep3 956.50796567308 956.50686993586 101.15 2 -1.6228954495180634 0.42174249141713843 1.0 ['nc|ENSG00000179115|Q9Y285-2|FARSA', 'ENSG00000179115|ENST00000314606|FARSA', 'ZNF490-FARSA|1|fusion'] 89991 26242 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 109.38 1 -1.6229466753362367 0.4217490649902804 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 83420 23888 QCEECQCWQH True H1975_Epitope_Rep3 1292.4372625379199 1292.43616993586 99.599 2 -1.6232716148113573 0.4217735793290818 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 107475 2743 TAAARLPPSV True H1975_Epitope_Rep2 981.5607295219299 981.55962993586 14.593 2 -1.6234691021853747 0.4217735793290818 1.0 ['nc|ENSG00000141971|Q96EY5-2|MVB12A', 'nc|ENSG00000141971|Q96EY5-3|MVB12A', 'ENSG00000141971|ENST00000317040|MVB12A'] 27374 22617 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 94.177 2 -1.623558387567054 0.4218256223712629 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 119559 9287 VERFRYGW True PC9_epitope_Rep4 1111.5563128478298 1111.5552099358601 43.327 2 -1.6236305297302172 0.42183806146572106 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1', 'nc|ENSG00000167525|Q8NCQ7-3|PROCA1'] 16522 24284 EEPPARQP True H1975_Epitope_Rep3 922.45084471978 922.44974993586 101.15 2 -1.6236891305802406 0.42183806146572106 1.0 ['ENST00000608937.5_1_9:137000533-137000803:+|nuORF'] 69531 16299 LVSWGDYP True PC9_epitope_Rep3 935.4388830537498 935.43778993586 67.831 2 -1.6237367922965487 0.42183806146572106 1.0 ['ENSG00000167754|ENST00000336334|KLK5', 'ENST00000595585.1_1_19:51446889-51452204:-|nuORF'] 76441 8554 NSWFYFLILI True PC9_epitope_Rep4 1314.7012457460198 1314.69961490379 40.381 3 -1.6237699452732188 0.42183806146572106 1.0 ['ENST00000505030.5_1_5:87962937-87963072:-|nuORF'] 114182 23083 TRTIRRKRWRR True PC9_epitope_Rep3 1583.9709277031097 1583.9698299358602 94.057 2 -1.6238647927434786 0.42183806146572106 1.0 ['ENST00000399933.7_1_9:6007594-6007651:-|nuORF'] 64045 6183 LQDGVLTPP True NCI_RA007_Epitope_Rep2 938.50729696674 938.50618993586 28.657 2 -1.6238788184933688 0.42183806146572106 1.0 ['ENST00000557932.5_1_15:102513813-102516466:+|nuORF', 'ENST00000400706.3_1_12:88275-90926:+|nuORF', 'nc|ENSG00000292372|Q9NQA3|WASH6P', 'nc|ENSG00000185596|C4AMC7|WASH3P', 'nc|ENSG00000291134|Q6VEQ5|WASH2P', 'ENSG00000181404|ENST00000696149|WASHC1', 'nc|ENSG00000234769|A8MWX3|WASH4P', 'ENSG00000182484|ENST00000359512|WASH6P'] 114651 26639 TSPVGDHG True H1975_Epitope_Rep3 768.34023164164 768.33912993586 111.25 2 -1.6239345082356726 0.42183806146572106 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2'] 91033 22593 RLKTAAAAAA True PC9_epitope_Rep3 942.5610638750998 942.55996993586 92.174 2 -1.6239493287948292 0.42183806146572106 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 135325 20993 YCPQQDAL True NCI_RA007_Epitope_Rep5 936.4011176460398 936.40002993586 87.76 2 -1.623956043343132 0.42183806146572106 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13'] 43952 15608 ILFCFQHL True H1975_Epitope_Rep3 1019.52625858951 1019.52516993586 65.452 2 -1.6239868335306782 0.42183806146572106 1.0 ['ENST00000377474.3_1_13:77457448-77457556:-|nuORF'] 123481 25450 VIGIHIGV True PC9_epitope_Rep2 806.50142374066 806.50087496793 103.57 1 -1.6240040380517418 0.42183806146572106 1.0 ['ENSG00000174498|ENST00000327987|IGDCC3'] 78806 19385 PENKITLCKIH True NCI_RA007_Epitope_Rep4 1294.70674213262 1294.70509490379 83.833 3 -1.624044153054301 0.42183806146572106 1.0 ['ENSG00000130783|ENST00000253079|CCDC62', 'nc|ENSG00000130783|Q6P9F0-2|CCDC62', 'nc|ENSG00000130783|Q6P9F0-3|CCDC62'] 10284 21888 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 94.891 2 -1.624055313205309 0.42183806146572106 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 90017 22615 RGEDDYNMDE True H1975_Epitope_Rep2 1242.44589556198 1242.4442549037901 93.431 3 -1.6240949825957167 0.42183806146572106 1.0 ['nc|ENSG00000135052|Q8NBJ4-2|GOLM1', 'ENSG00000135052|ENST00000388712|GOLM1'] 121026 4996 VGFFAVLFFLW True H1975_Epitope_Rep3 1344.7270665710398 1344.7254149037901 24.346 3 -1.6242234528149282 0.4218398381560703 1.0 ['ENST00000557038.5_2_14:39734598-39748673:+|nuORF', 'ENST00000556990.1_1_14:39736294-39748673:+|nuORF', 'nc|ENSG00000150527|Q96PC5-6|MIA2', 'nc|ENSG00000150527|Q96PC5-5|MIA2', 'nc|ENSG00000150527|Q96PC5-8|MIA2', 'nc|ENSG00000150527|Q96PC5-10|MIA2', 'nc|ENSG00000150527|Q96PC5-9|MIA2', 'nc|ENSG00000150527|Q96PC5-14|MIA2', 'nc|ENSG00000150527|Q96PC5-7|MIA2', 'nc|ENSG00000150527|Q96PC5-12|MIA2', 'ENSG00000150527|ENST00000640607|MIA2'] 124557 10425 VLGNGKGI True PC9_epitope_Rep1 756.4493881678 756.44828993586 44.986 2 -1.624227919775414 0.4218398381560703 1.0 ['ENSG00000147912|ENST00000432825|FBXO10', 'nc|ENSG00000147912|Q9UK96-2|FBXO10', 'ENST00000541804.1_1_9:37512546-37588833:-|nuORF', 'ENST00000543968.5_1_9:37521875-37532049:-|nuORF'] 80764 23042 PLSHRGVRRLI True PC9_epitope_Rep6 1302.79967143102 1302.7980149037899 101.73 3 -1.6242731090196987 0.42184640912862126 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'ENST00000483585.5_1_7:45002340-45005995:-|nuORF', 'ENST00000463516.5_1_7:45002340-45002744:-|nuORF'] 131204 20935 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 86.672 2 -1.6243102605836575 0.4218529799518116 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 35957 21680 GVASEHMKRF True PC9_epitope_Rep4 1160.5760623162398 1160.57496993586 91.591 2 -1.6245200048489634 0.4218822807396379 1.0 ['ENSG00000171747|ENST00000307751|LGALS4'] 48300 24137 KDLVLKYRK True PC9_epitope_Rep4 1161.7233781729299 1161.7217249037901 101.33 3 -1.624756656779159 0.42188583182753175 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 10407 7966 CLHEFPGRTQ True H1975_Epitope_Rep3 1186.5553268716599 1186.5542299358601 35.613 2 -1.6247870035762362 0.42188583182753175 1.0 ['ENST00000568784.6_1_16:46722452-46722602:-|nuORF'] 97764 19925 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 83.555 2 -1.6248183277587767 0.42188583182753175 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 12753 7519 DLGTRTDLKL True PC9_epitope_Rep2 1130.62953735774 1130.62844993586 34.289 2 -1.6248192072653096 0.42188583182753175 1.0 ['ENSG00000038358|ENST00000358933|EDC4', 'nc|ENSG00000038358|Q6P2E9-2|EDC4', 'ENST00000572067.1_1_16:67917377-67917635:+|nuORF'] 78468 21942 PDCEQGKL True H1975_Epitope_Rep1 888.4011176460399 888.40002993586 91.27 2 -1.6248526239338035 0.4218989715324734 1.0 ['ENST00000520664.1_1_5:159845681-159845876:-|nuORF'] 109927 20548 THRRVRLHRH True NCI_RA007_Epitope_Rep3 1366.79190071198 1366.7908099358601 89.505 2 -1.62498552241105 0.4218989715324734 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 8764 7506 AVEEYVYDFRD True PC9_epitope_Rep2 1404.6197605196796 1404.61866993586 34.241 2 -1.6250847904139163 0.421923474663909 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 79425 12145 PGPFAPLLPPQ True PC9_epitope_Rep5 1132.6280808057597 1132.6269899358601 51.706 2 -1.6251079389967917 0.421923474663909 1.0 ['ENST00000524739.1_1_11:134129171-134129964:+|nuORF', 'ENST00000527082.5_1_11:134129171-134129738:+|nuORF'] 567 25329 AARLLFMSIKW True PC9_epitope_Rep2 1334.75329840222 1334.75220993586 103.1 2 -1.625144702906514 0.4219527716539012 1.0 ['ENSG00000112333|ENST00000368986|NR2E1', 'nc|ENSG00000112333|Q9Y466-2|NR2E1'] 130610 25063 VVAGARSK True NCI_RA007_Epitope_Rep1 786.4711862415401 786.4706349679301 103.73 1 -1.625154101002258 0.4219593404470505 1.0 ['nc|ENSG00000173406|O75553-3|DAB1', 'nc|ENSG00000173406|O75553-4|DAB1', 'nc|ENSG00000173406|O75553-5|DAB1', 'ENSG00000173406|ENST00000371236|DAB1', 'nc|ENSG00000173406|O75553|DAB1', 'nc|ENSG00000173406|O75553-2|DAB1'] 101594 10185 SPERRKPP True H1975_Epitope_Rep3 965.5406627836899 965.53956993586 44.221 2 -1.6253178294626571 0.4219772727272727 1.0 ['ENSG00000244486|ENST00000622235|SCARF2', 'nc|ENSG00000244486|Q96GP6|SCARF2'] 37419 13762 GWEWRNQAVW True PC9_epitope_Rep6 1330.62070400954 1330.6196099358601 64.734 2 -1.6253362261150905 0.4219808190536794 1.0 ['ENST00000590278.1_1_19:33695337-33695988:+|nuORF'] 85404 17699 QLEHQKRSAGR True PC9_epitope_Rep1 1308.7010795885599 1308.69998993586 72.874 2 -1.625359685279147 0.4219808190536794 1.0 ['ENST00000471681.5_1_3:56606414-56647710:+|nuORF'] 53146 24 KSNTPAAH True H1975_Epitope_Rep1 824.41406528824 824.41296993586 0.1132 2 -1.6253902295568952 0.4219808190536794 1.0 ['ENSG00000196141|ENST00000409140|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-4|SPATS2L', 'nc|ENSG00000196141|Q9NUQ6-3|SPATS2L'] 82282 20491 PTPDELHFL True H1975_Epitope_Rep2 1067.52876068731 1067.52766993586 84.897 2 -1.625407417794071 0.4219808190536794 1.0 ['nc|ENSG00000069020|O15021-2|MAST4', 'nc|ENSG00000069020|O15021-3|MAST4', 'nc|ENSG00000069020|O15021-6|MAST4', 'ENSG00000069020|ENST00000403625|MAST4', 'ENSG00000099308|ENST00000687212|MAST3', 'ENST00000608648.1_1_19:18220994-18239762:+|nuORF', 'MAST3|p.A548Pfs*4|1|0.2|ENSG00000099308|chr19:18134841-18134841|G/-|frameshift_variant', 'nc|ENSG00000099308|O60307|MAST3'] 6030 6663 APLQKAQIVR True PC9_epitope_Rep2 1122.6873270173799 1122.68569490379 31.034 3 -1.6255369047017392 0.42198738708027955 1.0 ['nc|ENSG00000101974|Q8NB49-3|ATP11C', 'ENST00000460773.5_1_X:138814597-138879340:-|nuORF', 'nc|ENSG00000101974|Q8NB49-2|ATP11C', 'nc|ENSG00000101974|Q8NB49-4|ATP11C', 'ENSG00000101974|ENST00000682941|ATP11C', 'nc|ENSG00000101974|Q8NB49|ATP11C'] 110961 10208 TLDAAISK True H1975_Epitope_Rep2 817.45453311789 817.45342993586 44.27 2 -1.6258662413523939 0.4220298154713208 1.0 ['nc|ENSG00000127481|Q5T4S7-3|UBR4', 'nc|ENSG00000127481|Q5T4S7-4|UBR4', 'ENSG00000127481|ENST00000375254|UBR4', 'nc|ENSG00000127481|Q5T4S7-2|UBR4', 'nc|ENSG00000127481|Q5T4S7-5|UBR4', 'ENST00000419533.1_1_1:19477984-19504233:-|nuORF'] 36208 10889 GVFVLFVFCL True PC9_epitope_Rep5 1142.6198246211798 1142.61817490379 46.871 3 -1.6258827514645935 0.4220298154713208 1.0 ['ENST00000406606.7_3_9:136627407-136627686:-|nuORF'] 134297 12517 WRSYRDWPWRR True NCI_RA007_Epitope_Rep1 1662.8280114371798 1662.8269099358602 52.667 2 -1.6259225252309448 0.4220298154713208 1.0 ['ENST00000253329.2_1_6:149862180-149862721:-|nuORF'] 121815 9925 VGNFQRQL True PC9_epitope_Rep5 960.5141136826799 960.5130099358599 43.148 2 -1.6259723392929124 0.4220591075912691 1.0 ['ENSG00000144395|ENST00000389175|CCDC150', 'ENST00000461825.1_1_2:197583226-197584436:+|nuORF', 'ENST00000463826.5_1_2:197584220-197590826:+|nuORF', 'ENST00000494389.5_1_2:197559796-197594150:+|nuORF', 'nc|ENSG00000144395|Q8NCX0-2|CCDC150'] 16979 13680 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 59.303 2 -1.6260332373892747 0.42207703670037494 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 111772 17636 TLQQHKLL True PC9_epitope_Rep3 979.5814649665099 979.58036993586 73.028 2 -1.6260532539565777 0.42208714423677784 1.0 ['ENSG00000166598|ENST00000299767|HSP90B1', 'ENST00000548462.5_1_12:104324233-104336580:+|nuORF', 'ENST00000551983.1_1_12:104335630-104337190:+|nuORF', 'ENST00000415545.2_1_1:92108345-92109332:+|nuORF', 'nc|ENSG00000259706|Q58FF3|HSP90B2P'] 77712 23002 PAAGSARGEKE True PC9_epitope_Rep4 1071.5308859456297 1071.53037496793 96.697 1 -1.6260624632158212 0.42208714423677784 1.0 ['ENSG00000109265|ENST00000682029|CRACD'] 77474 24300 NYPFINIRS True PC9_epitope_Rep4 1122.5821932425 1122.58054490379 101.95 3 -1.6262067235836022 0.42208714423677784 1.0 ['nc|ENSG00000117036|P41162-2|ETV3', 'ENSG00000117036|ENST00000368192|ETV3'] 36754 16507 GVPASTCL True NCI_RA007_Epitope_Rep4 746.36327558534 746.36272496793 71.558 1 -1.6262380808539252 0.42208714423677784 1.0 ['ENSG00000106384|ENST00000223114|MOGAT3'] 52023 16820 KLFTFDLNPSD True NCI_RA007_Epitope_Rep5 1295.63976768827 1295.63812490379 71.445 3 -1.6263066135864899 0.42208714423677784 1.0 ['ENSG00000004399|ENST00000324093|PLXND1', 'nc|ENSG00000004399|Q9Y4D7-2|PLXND1'] 85194 27651 QKENLRKFY True PC9_epitope_Rep3 1224.6615061923599 1224.6604099358601 114.26 2 -1.6264114268533245 0.42209548046990386 1.0 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 28151 22372 FRKPCIFTLHK True PC9_epitope_Rep6 1388.77509647596 1388.77398993586 99.024 2 -1.6264740751395972 0.42209548046990386 1.0 ['ZNF559|p.S132C|1|0.15|ENSG00000188321|chr19:9341846-9341846|C/G|missense_variant'] 76406 5748 NSNFPGTTKSV True PC9_epitope_Rep2 1150.56185172074 1150.56074993586 27.501 2 -1.6265087671109204 0.42209548046990386 1.0 ['nc|ENSG00000148600|Q96JP9-2|CDHR1'] 66979 19309 LTADCCGRRPV True PC9_epitope_Rep4 1189.5695970368101 1189.56848993586 82.379 2 -1.6266694124541792 0.4221020461491269 1.0 ['ENSG00000259803|ENST00000682282|SLC22A31', 'nc|ENSG00000259803|A6NKX4|SLC22A31'] 19487 4252 ELQFPRIPEG True H1975_Epitope_Rep3 1184.6189726740397 1184.61733490379 21.472 3 -1.6266835204657057 0.4221086116791638 1.0 ['NES|p.T338I|1|0.17|ENSG00000132688|chr1:156673175-156673175|G/A|missense_variant'] 34295 4221 GPPDWTDY True PC9_epitope_Rep3 949.38176210045 949.3806699358599 21.352 2 -1.6267645073055992 0.42211694670711064 1.0 ['ENSG00000127329|ENST00000334414|PTPRB', 'PTPRB|p.W1340*|1|0.13|ENSG00000127329|chr12:70559383-70559383|C/-|frameshift_variant', 'PTPRB|p.R1326Dfs*26|1|0.22|ENSG00000127329|chr12:70559428-70559428|C/-|frameshift_variant', 'nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB'] 117477 8460 VAEAWARL True PC9_epitope_Rep2 914.4974009893798 914.49630993586 37.909 2 -1.626855929968253 0.42211694670711064 1.0 ['ENSG00000167553|ENST00000301072|TUBA1C'] 98118 17482 SIAPKTTRVT True PC9_epitope_Rep1 1072.62405805448 1072.62296993586 72.04 2 -1.6268831769645586 0.42211694670711064 1.0 ['ENSG00000118705|ENST00000237530|RPN2', 'nc|ENSG00000118705|P04844-2|RPN2'] 120223 17871 VFMVYNRTR True NCI_RA007_Epitope_Rep3 1184.6124478249599 1184.61079490379 78.337 3 -1.6270242881064054 0.4221300766827606 1.0 ['ENSG00000142623|ENST00000375471|PADI1'] 58857 14251 LFRWEQDEIPR True PC9_epitope_Rep6 1487.75211210191 1487.75100993586 66.707 2 -1.6270733623146783 0.4221300766827606 1.0 ['ENST00000460981.1_1_6:111714035-111726820:-|nuORF'] 126158 10679 VPFPSIKN True PC9_epitope_Rep6 900.5069030439199 900.50580993586 51.892 2 -1.627089554769442 0.42213664144684526 1.0 ['nc|ENSG00000144730|Q8NFM7-2|IL17RD', 'nc|ENSG00000144730|Q8NFM7-4|IL17RD', 'nc|ENSG00000144730|Q8NFM7-3|IL17RD', 'ENSG00000144730|ENST00000296318|IL17RD', 'ENST00000469841.5_1_3:57131519-57204269:-|nuORF'] 88772 22888 RDKKQIREPVD True PC9_epitope_Rep4 1382.76301113878 1382.7613649037899 96.258 3 -1.6271744053658195 0.4221384105057482 1.0 ['ENST00000497929.1_1_3:124951187-125011317:-|nuORF', 'ENSG00000163848|ENST00000360647|ZNF148'] 119439 19970 VEPKRQKLRA True NCI_RA007_Epitope_Rep2 1223.7462388758297 1223.74567496793 82.679 1 -1.6272172302753645 0.4221384105057482 1.0 ['ENSG00000115423|ENST00000389394|DNAH6'] 1463 4996 AEELLGSL True NCI_RA007_Epitope_Rep1 830.43854870058 830.43744993586 23.516 2 -1.6272922103526457 0.42214497495143644 1.0 ['MYH15|p.H1065Pfs*7|1|0.16|ENSG00000144821|chr3:108437641-108437641|T/-|frameshift_variant', 'ENSG00000144821|ENST00000693548|MYH15', 'ENST00000478998.5_1_3:108124174-108178278:-|nuORF', 'MYH15|p.K849Sfs*9|1|0.15|ENSG00000144821|chr3:108444809-108444809|T/-|frameshift_variant'] 51949 24785 KKVKMATK True PC9_epitope_Rep3 932.5841078187999 932.58355496793 100.71 1 -1.6274328580050257 0.4221742587754175 1.0 ['nc|nan|Q6PH81-2|C16orf87', 'ENSG00000155330|ENST00000285697|C16orf87'] 138997 4341 YSFRQSFSLY True NCI_RA007_Epitope_Rep2 1296.6138872936 1296.61278993586 21.522 2 -1.6274764148498864 0.4221808226647431 1.0 ['nc|ENSG00000144711|Q6DN90-2|IQSEC1', 'nc|ENSG00000144711|Q6DN90|IQSEC1', 'ENSG00000144711|ENST00000613206|IQSEC1'] 81690 6274 PRTFEGIDP True NCI_RA007_Epitope_Rep2 1030.5083595958997 1030.5072699358602 29.011 2 -1.6275610045256341 0.4221939499960242 1.0 ['ENSG00000057608|ENST00000380191|GDI2', 'nc|ENSG00000057608|P50395-2|GDI2'] 122915 8101 VGVSTLSL True PC9_epitope_Rep1 774.44871946146 774.44762993586 35.987 2 -1.627577384818561 0.4221939499960242 1.0 ['ENSG00000011114|ENST00000334746|BTBD7', 'BTBD7|p.H927Tfs*21|1|0.19|ENSG00000011114|chr14:93242893-93242894|-/T|frameshift_variant'] 134184 8325 WRLRHFVSWLW True H1975_Epitope_Rep1 1584.84662162344 1584.8455299358602 36.954 2 -1.6278020565377076 0.42223156172972726 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF', 'ENST00000435868.1_1_22:24056493-24057363:-|nuORF', 'ENST00000451837.5_1_22:24056493-24059477:-|nuORF', 'ENST00000422506.5_1_22:24056493-24059433:-|nuORF', 'ENST00000452737.5_1_22:24056401-24059477:-|nuORF', 'nc|ENSG00000272578|Q6P575|GUSBP11'] 25747 20998 FFPHGDAS True NCI_RA007_Epitope_Rep5 876.37661715036 876.37552993586 87.779 2 -1.6279432460942134 0.42223156172972726 1.0 ['nc|ENSG00000182132|Q9NZI2|KCNIP1', 'ENSG00000182132|ENST00000328939|KCNIP1', 'nc|ENSG00000182132|Q9NZI2-3|KCNIP1', 'nc|ENSG00000182132|Q9NZI2-4|KCNIP1'] 139577 10548 YTNVTEGLK True H1975_Epitope_Rep2 1023.5236753068699 1023.5225699358599 45.593 2 -1.628006331866749 0.42223156172972726 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000589793.1_1_17:76539878-76567391:-|nuORF'] 35839 13048 GVAAAGHA True NCI_RA007_Epitope_Rep5 652.3292730351201 652.32872496793 56.866 1 -1.6280730837624435 0.42223156172972726 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 122007 17141 VGQGVQAA True NCI_RA007_Epitope_Rep2 728.3817025307999 728.38115496793 71.412 1 -1.6281927838833312 0.4222722006406325 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 56797 7903 LEATVDLAFP True H1975_Epitope_Rep3 1074.5597264624198 1074.5586299358602 35.372 2 -1.6283932514864008 0.4223128386283352 1.0 ['ENSG00000139793|ENST00000679496|MBNL2'] 82950 22973 PWRRRRRSPR True PC9_epitope_Rep4 1421.8340998771298 1421.83246490379 96.586 3 -1.6284292906440059 0.42231940027260334 1.0 ['ENST00000358625.3_1_9:137004970-137005837:+|nuORF'] 47933 10515 IYYLVRWGQFL True NCI_RA007_Epitope_Rep1 1456.7867067054797 1456.78560993586 44.884 2 -1.6285157206651122 0.42234867845662816 1.0 ['ENST00000465893.1_1_6:41037763-41039373:-|nuORF'] 27375 22768 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 94.784 2 -1.6285660125925834 0.42236180048385447 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 15711 9479 EDAERREREER True NCI_RA007_Epitope_Rep1 1473.6920310264902 1473.69147496793 40.866 1 -1.628581112486746 0.42236180048385447 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 79893 17632 PILVMKFI True NCI_RA007_Epitope_Rep1 959.58779621691 959.58724496793 72.72 1 -1.6287873022868522 0.4223946029438488 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 90499 3385 RKAPKKKLPQK True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 17.766 3 -1.6289873229160754 0.4223946029438488 1.0 ['ENST00000483741.1_1_1:44684093-44685454:+|nuORF', 'ENSG00000178028|ENST00000372289|DMAP1'] 83137 8297 PYRLLKTWV True NCI_RA007_Epitope_Rep4 1174.68626438822 1174.6846049037902 38.724 3 -1.6289887119589732 0.4223946029438488 1.0 ['ENST00000521560.1_2_8:99118529-99129303:-|nuORF'] 3664 6959 AGRGHCGE True NCI_RA007_Epitope_Rep2 785.3238703848499 785.32332496793 31.69 1 -1.6290027990127511 0.4223946029438488 1.0 ['nc|ENSG00000177427|Q96C03-2|MIEF2'] 135478 6312 YEDEAKLVI True PC9_epitope_Rep4 1078.55464108198 1078.55354993586 31.339 2 -1.6290353831652125 0.4223946029438488 1.0 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13', 'USP13|p.I633*|1|0.14|ENSG00000058056|chr3:179754823-179754823|C/-|frameshift_variant', 'USP13|p.R474Lfs*25|1|0.36|ENSG00000058056|chr3:179742237-179742237|G/-|frameshift_variant'] 40572 17542 HSVELLLP True PC9_epitope_Rep3 906.5174677276199 906.51636993586 72.66 2 -1.6291021774665828 0.4223968565815324 1.0 ['nc|ENSG00000122417|Q9ULJ1-3|ODF2L', 'nc|ENSG00000122417|Q9ULJ1|ODF2L', 'ENST00000480440.5_1_1:86847891-86851212:-|nuORF', 'nc|ENSG00000122417|Q9ULJ1-6|ODF2L', 'nc|ENSG00000122417|Q9ULJ1-2|ODF2L', 'ENSG00000122417|ENST00000460698|ODF2L'] 32903 10541 GINRYELYSRH True NCI_RA007_Epitope_Rep2 1406.7054962626598 1406.70438993586 45.599 2 -1.629165473230225 0.4223968565815324 1.0 ['ENSG00000177706|ENST00000313766|FAM20C'] 123680 7846 VINVIRVTI True NCI_RA007_Epitope_Rep1 1025.6597152872098 1025.65860993586 34.51 2 -1.6291915752355917 0.4223968565815324 1.0 ['ENST00000570162.1_1_15:41102303-41103086:+|nuORF'] 52089 24155 KLLQLYKMFL True PC9_epitope_Rep2 1295.7675514840298 1295.76589490379 98.438 3 -1.6292127186341407 0.4223968565815324 1.0 ['ENST00000495399.1_1_9:72435845-72472969:+|nuORF'] 125563 14405 VLYMLTEM True NCI_RA007_Epitope_Rep1 998.48167646586 998.48056993586 60.074 2 -1.6292422931686332 0.4223968565815324 1.0 ['nc|ENSG00000189079|Q68CP9-3|ARID2', 'ENSG00000189079|ENST00000334344|ARID2', 'ARID2|p.A1183Hfs*5|1|0.3|ENSG00000189079|chr12:45851670-45851670|G/-|frameshift_variant', 'ARID2|p.G803Afs*19|1|0.12|ENSG00000189079|chr12:45850530-45850530|G/-|frameshift_variant', 'ENST00000480128.1_1_12:46231109-46233281:+|nuORF', 'ENST00000479608.5_1_12:46230576-46239804:+|nuORF'] 119210 10202 VEKPAPKGK True NCI_RA007_Epitope_Rep5 952.5705659296399 952.56946993586 45.875 2 -1.629269220274069 0.4223968565815324 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'AFF2|p.P472Nfs*24|2|0.14|ENSG00000155966|chrX:148953596-148953596|C/AA|frameshift_variant', 'nc|ENSG00000155966|P51816-7|AFF2', 'AFF2|p.T842S|1|0.66|ENSG00000155966|chrX:148956569-148956569|A/T|missense_variant'] 30309 8419 GACTWRATEP True PC9_epitope_Rep4 1090.4865786055 1090.4854899358602 39.848 2 -1.6293406659867637 0.4223968565815324 1.0 ['ENST00000609359.1_1_4:140335098-140374868:-|nuORF'] 128984 6168 VSVYAPPVGG True NCI_RA007_Epitope_Rep3 944.4967322830398 944.49562993586 31.264 2 -1.6293781186794771 0.4223968565815324 1.0 ['ENSG00000136930|ENST00000259457|PSMB7', 'nc|ENSG00000136930|Q99436-2|PSMB7'] 56889 6372 LEDNTFMTLW True H1975_Epitope_Rep1 1268.57472490356 1268.57362993586 29.571 2 -1.6293991452445376 0.4223968565815324 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 123282 24533 VHSAVLHP True H1975_Epitope_Rep2 858.47118624154 858.47008993586 100.92 2 -1.6294524988597927 0.4224147720820368 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 93249 6824 RRRRRRWHWH True NCI_RA007_Epitope_Rep1 1600.89368044192 1600.8920249037901 30.55 3 -1.6295761188496147 0.42244100747200836 1.0 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 42795 17155 IFIFSAFIQVF True NCI_RA007_Epitope_Rep3 1330.7325458743 1330.7314499358602 75.364 2 -1.6295863085600018 0.42244100747200836 1.0 ['nc|ENSG00000213439|P0C628|OR5AC1'] 76411 5585 NSPPGTQLQPS True H1975_Epitope_Rep3 1124.5462016566 1124.5451099358602 26.523 2 -1.6296098671922894 0.42244100747200836 1.0 ['ENST00000261318.4_1_12:117155416-117155572:-|nuORF'] 4969 11844 ALIMVMVL True PC9_epitope_Rep4 888.51766805176 888.51656993586 53.334 2 -1.6296267904505528 0.42244100747200836 1.0 ['ENST00000494792.1_1_10:126307332-126395327:-|nuORF'] 108474 12652 TEEQVQKF True H1975_Epitope_Rep2 1007.4923751785898 1007.49126993586 53.763 2 -1.6297951759251605 0.4224541242732558 1.0 ['ENST00000533125.1_8:145505676-145515010:-|nuORF'] 12365 16264 DIYLYNKP True H1975_Epitope_Rep1 1024.52294703088 1024.5223749679299 67.908 1 -1.6298411583448515 0.4224541242732558 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2'] 108062 8620 TDIPVNFPK True H1975_Epitope_Rep1 1029.54949613189 1029.54838993586 38.084 2 -1.629914107387277 0.42247203769942654 1.0 ['nc|ENSG00000054983|P54803-3|GALC', 'ENSG00000054983|ENST00000261304|GALC', 'nc|ENSG00000054983|P54803-4|GALC'] 26608 10910 FKKPTYCNF True NCI_RA007_Epitope_Rep4 1146.55320161334 1146.5515649037902 48.826 3 -1.6301136030312446 0.4224899507187791 1.0 ['ENST00000480809.5_1_3:185925300-186038248:-|nuORF', 'nc|ENSG00000058866|P49619-3|DGKG', 'nc|ENSG00000058866|P49619-2|DGKG', 'ENSG00000058866|ENST00000265022|DGKG'] 65338 6229 LSELPQEIGN True NCI_RA007_Epitope_Rep1 1098.55570371114 1098.55460993586 28.262 2 -1.630524188923787 0.42254192830458626 1.0 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'ENST00000487251.5_1_6:53762124-53769284:+|nuORF'] 36785 18131 GVPGTTVRV True PC9_epitope_Rep3 884.50796567308 884.50686993586 74.941 2 -1.6305690778951256 0.42254368733606607 1.0 ['ENST00000376398.6_1_20:26054468-26063613:+|nuORF', 'nc|ENSG00000125804|Q5T1J6|FAM182A'] 91601 4676 RPDCWKRRKR True PC9_epitope_Rep2 1399.7731394133496 1399.77148490379 23.356 3 -1.6306409482239677 0.42254368733606607 1.0 ['ENST00000316637.6_1_6:35287445-35287621:+|nuORF'] 123772 15200 VISNGKAG True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 65.15 1 -1.630699483984839 0.4225454462876543 1.0 ['CON__Q28194'] 20161 21582 ENNVLSPFAVP True PC9_epitope_Rep1 1185.60298825673 1185.60188993586 87.838 2 -1.6307099421283122 0.4225454462876543 1.0 ['TP53|p.L35Ffs*8|1|0.48|ENSG00000141510|chr17:7676264-7676265|-/A|frameshift_variant'] 85916 8932 QNRWKRQNFHE True H1975_Epitope_Rep1 1541.7599914470095 1541.75888993586 39.262 2 -1.630872557668496 0.4225520029067127 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 32327 22494 GGAHASYY True H1975_Epitope_Rep3 824.34531702208 824.34420993586 94.023 2 -1.631056262975441 0.42258126781192873 1.0 ['nc|ENSG00000158882|Q969M1-2|TOMM40L', 'ENSG00000158882|ENST00000367988|TOMM40L'] 136730 13783 YILYILFKV True NCI_RA007_Epitope_Rep5 1170.7052684973 1170.7041699358601 59.693 2 -1.6311216121255296 0.42259437978995174 1.0 ['nc|ENSG00000166405|Q7Z5B4-2|RIC3'] 63436 6320 LPGSPKQN True NCI_RA007_Epitope_Rep4 839.4501164437901 839.4495649679301 30.914 1 -1.6311553885767827 0.42259437978995174 1.0 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113931616-113943025:+|nuORF'] 30727 9501 GAMSHRGG True H1975_Epitope_Rep2 771.3446058294298 771.3440549679301 41.515 1 -1.631390373424055 0.42261931792380003 1.0 ['ENST00000291672.5_1_21:47602757-47602988:-|nuORF'] 120526 9709 VFYTVVFP True NCI_RA007_Epitope_Rep4 970.5164050984598 970.51530993586 44.19 2 -1.631418820860906 0.42261931792380003 1.0 ['ENSG00000181785|ENST00000641320|OR5AS1', 'OR5AS1|p.M284L|1|0.25|ENSG00000181785|chr11:56031268-56031268|A/T|missense_variant', 'OR5AS1|p.M284K|1|0.22|ENSG00000181785|chr11:56031269-56031269|T/A|missense_variant'] 126801 6605 VPSRAPSPAP True PC9_epitope_Rep4 977.5294293936499 977.52832993586 32.565 2 -1.6314606138106282 0.42261931792380003 1.0 ['nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2', 'ENSG00000128298|ENST00000381669|BAIAP2L2'] 15738 15056 EDEAHEGC True NCI_RA007_Epitope_Rep5 888.2919611198799 888.29086993586 64.579 2 -1.631469916192533 0.42261931792380003 1.0 ['ENST00000540831.1_1_11:61292241-61300574:-|nuORF', 'nc|ENSG00000011347|O43581|SYT7', 'nc|ENSG00000011347|O43581-6|SYT7', 'nc|ENSG00000011347|O43581-2|SYT7', 'ENST00000539246.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-5|SYT7', 'ENST00000539468.5_1_11:61286101-61314074:-|nuORF', 'nc|ENSG00000011347|O43581-4|SYT7', 'ENSG00000011347|ENST00000539008|SYT7'] 109928 21086 THRRVRLHRH True NCI_RA007_Epitope_Rep4 1366.79190071198 1366.7908099358601 91.423 2 -1.6315003473453094 0.42261931792380003 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 114965 24626 TTILLLKLL True NCI_RA007_Epitope_Rep1 1026.7052684972998 1026.70467496793 101.99 1 -1.6315207228404969 0.42261931792380003 1.0 ['ENST00000317025.12_1_8:38131368-38131458:-|nuORF'] 88674 3199 RCAPRGKA True PC9_epitope_Rep1 857.4653896684499 857.46428993586 17.185 2 -1.631544197131388 0.42261931792380003 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF'] 112401 9035 TNFLFIVMV True NCI_RA007_Epitope_Rep2 1082.58343911246 1082.58234993586 39.745 2 -1.631548167119436 0.42261931792380003 1.0 ['ENST00000262605.8_1_20:43119153-43119294:+|nuORF'] 42927 22364 IFYEKINI True PC9_epitope_Rep5 1038.57498260374 1038.57388993586 91.033 2 -1.6315481902038236 0.42261931792380003 1.0 ['ENSG00000135205|ENST00000285871|CCDC146', 'nc|ENSG00000135205|Q8IYE0-2|CCDC146', 'ENST00000474733.5_1_7:76911883-76916812:+|nuORF'] 133254 12382 WEEMRDKMRKW True NCI_RA007_Epitope_Rep2 1593.7544376843698 1593.7533499358601 52.77 2 -1.6317489516453987 0.42264073834417465 1.0 ['ENSG00000104412|ENST00000220853|EMC2', 'ENST00000517593.5_1_8:109455866-109468189:+|nuORF'] 126544 12416 VPPDTRNV True PC9_epitope_Rep5 896.47158016436 896.4710349679301 52.758 1 -1.631853760536621 0.42264073834417465 1.0 ['nc|ENSG00000275835|Q96RT8-2|TUBGCP5', 'ENSG00000275835|ENST00000615383|TUBGCP5'] 34178 11223 GPGGKGRC True H1975_Epitope_Rep2 730.3544422371399 730.35389496793 48.212 1 -1.6318833617990465 0.42264073834417465 1.0 ['ENSG00000101200|ENST00000380293|AVP', 'ENSG00000101405|ENST00000217386|OXT'] 95994 10916 SEAFNMESVNK True H1975_Epitope_Rep3 1254.55505208814 1254.5539499358601 47.075 2 -1.6318919908864409 0.42264073834417465 1.0 ['ENSG00000152527|ENST00000282406|PLEKHH2', 'nc|ENSG00000152527|Q8IVE3-2|PLEKHH2', 'ENST00000405223.6_1_2:43871812-43968195:+|nuORF', 'nc|ENSG00000152527|Q8IVE3-3|PLEKHH2'] 4360 22697 AIPSIMNVLL True PC9_epitope_Rep3 1069.62055289717 1069.61944993586 92.573 2 -1.631938354687021 0.42264073834417465 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN5A|p.I1836Sfs*8|1|0.26|ENSG00000183873|chr3:38550867-38550867|G/-|frameshift_variant', 'nc|ENSG00000183873|Q14524-5|SCN5A', 'nc|ENSG00000183873|Q14524-3|SCN5A', 'nc|ENSG00000183873|Q14524-6|SCN5A', 'ENSG00000183873|ENST00000423572|SCN5A', 'nc|ENSG00000183873|Q14524|SCN5A', 'nc|ENSG00000183873|Q14524-4|SCN5A', 'COBLL1-SCN3A|3|fusion', 'COBLL1-SCN3A|2|fusion', 'COBLL1-SCN3A|1|fusion', 'nc|ENSG00000153253|Q9NY46-4|SCN3A', 'nc|ENSG00000153253|Q9NY46-2|SCN3A', 'nc|ENSG00000153253|Q9NY46|SCN3A', 'ENSG00000153253|ENST00000283254|SCN3A', 'SCN4A|p.R1448Lfs*2|1|0.32|ENSG00000007314|chr17:63941939-63941939|C/-|frameshift_variant', 'ENSG00000007314|ENST00000435607|SCN4A', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'nc|ENSG00000196876|Q9UQD0-5|SCN8A', 'nc|ENSG00000196876|Q9UQD0|SCN8A', 'ENSG00000196876|ENST00000627620|SCN8A', 'nc|ENSG00000196876|Q9UQD0-3|SCN8A', 'nc|ENSG00000169432|Q15858-4|SCN9A', 'nc|ENSG00000169432|Q15858-3|SCN9A', 'nc|ENSG00000169432|Q15858-2|SCN9A', 'ENSG00000169432|ENST00000642356|SCN9A', 'SCN9A|p.G1851Lfs*35|1|0.32|ENSG00000169432|chr2:166199088-166199089|-/AA|frameshift_variant', 'ENSG00000185313|ENST00000449082|SCN10A'] 115538 5816 TVHASSTPA True PC9_epitope_Rep1 869.42429561877 869.42318993586 27.187 2 -1.6321334852513985 0.4226699965943921 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 61925 22544 LLLLLLSPP True NCI_RA007_Epitope_Rep1 977.65250464845 977.65195496793 92.396 1 -1.6321897622640502 0.42268790228286657 1.0 ['ENST00000479510.2_1_6:33387852-33406697:+|nuORF', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000198753|Q9ULL4-2|PLXNB3', 'ENSG00000198753|ENST00000361971|PLXNB3', 'PLXNB3|p.P307Rfs*57|1|0.2|ENSG00000198753|chrX:153767746-153767747|-/G|frameshift_variant', 'ATRN-TNKS2|2|fusion'] 89982 23786 RGALHFRV True NCI_RA007_Epitope_Rep3 954.55116789774 954.55006993586 103.09 2 -1.632364672505391 0.42271715933342413 1.0 ['chr3:118905718-118914503|368|14.39|0.0|11.97|-|2|TE_info:L1PA2,L1PA2_dup926,L1,LINE,donor,+,118914503,118920271|IGSF11,None|121'] 108570 19216 TEHGSKMRKSI True NCI_RA007_Epitope_Rep5 1272.66085456936 1272.65920490379 80.778 3 -1.6325755433129303 0.42273681820761677 1.0 ['ENSG00000146918|ENST00000356309|NCAPG2', 'nc|ENSG00000146918|Q86XI2-2|NCAPG2', 'ENST00000467785.5_1_7:158448006-158486027:-|nuORF'] 21468 22113 ERQENTGSL True NCI_RA007_Epitope_Rep4 1032.4836014000398 1032.4825099358602 95.902 2 -1.6325882046776676 0.42273681820761677 1.0 ['ENSG00000106246|ENST00000292478|PTCD1'] 41916 13251 IEAIELPEP True H1975_Epitope_Rep3 1009.5331773614099 1009.53267496793 56.226 1 -1.632621255895308 0.42273681820761677 1.0 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20'] 100187 8797 SLLGKLVSYTN True H1975_Epitope_Rep1 1193.6655885132898 1193.66448993586 38.763 2 -1.6327091251210455 0.42274512474744036 1.0 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4', 'nc|ENSG00000124067|Q9UP95-4|SLC12A4', 'ENST00000573023.6_1_16:67984709-67996179:-|nuORF', 'ENST00000576462.1_1_16:67991639-68002357:-|nuORF', 'ENST00000572010.5_1_16:67986261-67997363:-|nuORF'] 62971 18867 LNEIKDSV True PC9_epitope_Rep4 916.4865615221601 916.48546993586 80.658 2 -1.6327300868615193 0.42274512474744036 1.0 ['ENSG00000167658|ENST00000309311|EEF2', 'EEF2|p.V680L|1|0.21|ENSG00000167658|chr19:3977848-3977848|C/A|missense_variant'] 99847 11634 SLHCAEDD True NCI_RA007_Epitope_Rep5 888.3283466285999 888.32724993586 51.401 2 -1.632746418390118 0.42274512474744036 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 3079 7115 AGAGMISK True H1975_Epitope_Rep1 733.37926000265 733.37871496793 32.394 1 -1.6328638778547806 0.42275167709054584 1.0 ['ENSG00000169251|ENST00000351193|NMD3', 'NMD3|p.E344Kfs*10|1|0.18|ENSG00000169251|chr3:161246345-161246345|G/-|frameshift_variant'] 124252 3368 VLCVAWQDYV True PC9_epitope_Rep2 1194.5743309807401 1194.57268490379 18.224 3 -1.6329028852148912 0.42275822928490353 1.0 ['ENSG00000165029|ENST00000374736|ABCA1', 'ENST00000494467.1_1_9:107587931-107593243:-|nuORF'] 69821 19186 LWWRNWFWVHF True H1975_Epitope_Rep1 1675.8200725224299 1675.8189699358602 79.952 2 -1.6331234447536187 0.4227988331573989 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 121155 12949 VGGGSIRN True NCI_RA007_Epitope_Rep3 758.40350060454 758.4029549679301 58.209 1 -1.6333056509831336 0.4228232863807135 1.0 ['ENSG00000165072|ENST00000377182|MAMDC2'] 79254 16186 PGGRARPA True H1975_Epitope_Rep2 780.4354694391599 780.43436993586 67.469 2 -1.6333890120505703 0.4228232863807135 1.0 ['ENST00000345057.8_1_16:67189180-67190534:-|nuORF'] 71226 19037 MFVFKERWFWR True NCI_RA007_Epitope_Rep1 1630.8231092975398 1630.82146490379 78.19 3 -1.6334755905191771 0.4228411876872787 1.0 ['ENSG00000157227|ENST00000311852|MMP14'] 85912 12894 QNRRMKWKRSK True H1975_Epitope_Rep3 1516.85211801004 1516.8510299358602 54.822 2 -1.6335041155834125 0.42284773849384255 1.0 ['ENSG00000130675|ENST00000252971|MNX1', 'nc|ENSG00000130675|P50219-2|MNX1'] 58572 18900 LFEGGREL True PC9_epitope_Rep4 919.4763311916299 919.4752299358599 80.786 2 -1.6336929540484597 0.422888339046149 1.0 ['ENST00000513322.5_1_5:115176765-115176948:-|nuORF'] 114810 19773 TTDFAM[Oxidation]QNVL True H1975_Epitope_Rep2 1154.52777509158 1154.5266699358601 82.031 2 -1.6337148678460254 0.42291758884084124 1.0 ['ENSG00000141101|ENST00000268802|NOB1'] 21464 16166 ERPSNCPRSC True H1975_Epitope_Rep2 1147.48626133567 1147.48462490379 67.394 3 -1.633925866032176 0.4229372375439791 1.0 ['ENST00000370631.3_1_10:99434638-99434824:+|nuORF'] 134865 7163 YAAKRVIGDNP True H1975_Epitope_Rep3 1202.6407707477797 1202.6396699358602 32.527 2 -1.6339646178685847 0.4229372375439791 1.0 ['nc|ENSG00000136813|Q5VYK3|ECPAS', 'ENSG00000136813|ENST00000684092|ECPAS'] 38382 17718 HGGEGDSC True PC9_epitope_Rep6 760.2446170046401 760.24350993586 80.786 2 -1.6339653341691118 0.4229372375439791 1.0 ['nc|ENSG00000153094|O43521-11|BCL2L11', 'nc|ENSG00000153094|O43521-10|BCL2L11', 'nc|ENSG00000153094|O43521-14|BCL2L11', 'nc|ENSG00000153094|O43521-19|BCL2L11', 'nc|ENSG00000153094|O43521-4|BCL2L11', 'nc|ENSG00000153094|O43521-8|BCL2L11', 'ENSG00000153094|ENST00000393256|BCL2L11'] 111800 7072 TLRDGISP True H1975_Epitope_Rep3 857.4606811274899 857.45958993586 32.17 2 -1.6340199764055876 0.4229437868143592 1.0 ['ENST00000491595.1_1_7:73624266-73629245:+|nuORF'] 30395 12449 GAFDHLPQL True NCI_RA007_Epitope_Rep5 996.5028802926399 996.50178993586 54.542 2 -1.6342250164207248 0.42301843108770654 1.0 ['ENSG00000169704|ENST00000307395|GP9'] 29970 20428 FYDGIKAILQ True PC9_epitope_Rep1 1166.6335601090198 1166.6324699358602 83.389 2 -1.6342544006406923 0.4230315273395828 1.0 ['ENSG00000133138|ENST00000357242|TBC1D8B'] 97946 19726 SHQLHTPMYF True PC9_epitope_Rep5 1259.57572796307 1259.57462993586 80.922 2 -1.6342558573119819 0.4230315273395828 1.0 ['ENSG00000169214|ENST00000641470|OR6F1'] 123683 7335 VINVIRVTI True NCI_RA007_Epitope_Rep5 1025.6597152872098 1025.65860993586 34.892 2 -1.6343116843923025 0.4230380752425807 1.0 ['ENST00000570162.1_1_15:41102303-41103086:+|nuORF'] 51948 24888 KKVKMATK True PC9_epitope_Rep1 932.5841078187999 932.58355496793 100.64 1 -1.6344375894554473 0.4230511706027214 1.0 ['nc|nan|Q6PH81-2|C16orf87', 'ENSG00000155330|ENST00000285697|C16orf87'] 67661 10699 LTFLNRGE True PC9_epitope_Rep1 948.5028802926399 948.50178993586 46.044 2 -1.6344521031176107 0.4230511706027214 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 127287 14880 VQLKAIPL True PC9_epitope_Rep6 880.5745886809199 880.57348993586 69.219 2 -1.6345002122156955 0.42306906647903947 1.0 ['ENSG00000064703|ENST00000369702|DDX20', 'DDX20|p.N510Kfs*2|1|0.29|ENSG00000064703|chr1:111765947-111765948|-/A|frameshift_variant', 'nc|ENSG00000064703|Q9UHI6-2|DDX20'] 81509 4900 PQRLLDDP True H1975_Epitope_Rep2 952.4977949121999 952.49668993586 23.931 2 -1.6350266746860571 0.4232021879007274 1.0 ['ENSG00000105737|ENST00000593562|GRIK5', 'ENST00000454993.6_1_19:42503025-42546997:-|nuORF'] 120479 24165 VFVLPFPV True PC9_epitope_Rep4 916.5422259234799 916.54112993586 101.42 2 -1.6351090975010696 0.4232021879007274 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 81135 16305 PPIMLIGH True NCI_RA007_Epitope_Rep4 876.4891448047999 876.48804993586 70.713 2 -1.6351692787092362 0.4232021879007274 1.0 ['ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 113251 14771 TQEKIWEFKGK True H1975_Epitope_Rep1 1392.7401504358797 1392.73904993586 62.041 2 -1.6353840732989589 0.42322836879432624 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1'] 10583 5390 CRQARRTRS True PC9_epitope_Rep5 1132.5995917254797 1132.59848993586 25.745 2 -1.635432050915283 0.42322836879432624 1.0 ['nc|ENSG00000047346|Q32MH5-2|ATOSA', 'ENSG00000047346|ENST00000619572|ATOSA', 'nc|ENSG00000047346|Q32MH5-3|ATOSA'] 124683 23457 VLIPRIARVCK True NCI_RA007_Epitope_Rep4 1266.7958319205397 1266.79417490379 101.8 3 -1.6354571079554545 0.42322836879432624 1.0 ['ENSG00000187764|ENST00000422704|SEMA4D', 'nc|ENSG00000187764|Q92854-2|SEMA4D'] 119388 14652 VENVKHVI True PC9_epitope_Rep2 936.5392658013599 936.53816993586 61.625 2 -1.6354862128765058 0.42322836879432624 1.0 ['ENSG00000100941|ENST00000216832|PNN'] 135334 2643 YCVYRREMD True PC9_epitope_Rep2 1233.52706351849 1233.52596993586 14.818 2 -1.6355799173956587 0.42324626103533575 1.0 ['ENSG00000123104|ENST00000381340|ITPR2'] 112299 3369 TMAKWIQGLQD True PC9_epitope_Rep3 1289.6438075228898 1289.64217490379 18.073 3 -1.6356542917722423 0.42325280561008544 1.0 ['ECSIT|p.E379D|1|0.15|ENSG00000130159|chr19:11506343-11506343|C/G|missense_variant'] 22425 21244 ETFPAGPRESD True H1975_Epitope_Rep2 1204.5360308957197 1204.5349299358602 87.924 2 -1.6356801312423117 0.4232545473113277 1.0 ['ENST00000375251.7_1_9:99252353-99252437:+|nuORF'] 100643 14409 SLQRHLLIH True PC9_epitope_Rep4 1115.65636124227 1115.6552699358601 63.334 2 -1.6357289051922697 0.4232545473113277 1.0 ['nc|ENSG00000138738|Q9NQX1-4|PRDM5', 'nc|ENSG00000138738|Q9NQX1-2|PRDM5', 'ENSG00000138738|ENST00000264808|PRDM5', 'ENST00000505484.5_1_4:121652936-121737791:-|nuORF'] 25718 16720 FFKLKSAC True NCI_RA007_Epitope_Rep5 942.4997094884999 942.49860993586 71.078 2 -1.6361009132967874 0.42329032916907783 1.0 ['ENSG00000174840|ENST00000311180|PDE12', 'ENST00000487257.1_2_3:57545269-57545728:+|nuORF', 'PDE12|p.P547T|1|0.51|ENSG00000174840|chr3:57559813-57559813|C/A|missense_variant'] 88096 19934 QVVSLFWKLFM True NCI_RA007_Epitope_Rep2 1396.7577150763198 1396.75660993586 82.539 2 -1.636105722674207 0.42329032916907783 1.0 ['ENST00000260818.10_1_3:132233460-132235298:+|nuORF'] 131353 25344 VVSAIPVPTL True H1975_Epitope_Rep3 994.60628273202 994.6057349679301 105.42 1 -1.6362739608549957 0.4233051568616327 1.0 ['ENSG00000187323|ENST00000442544|DCC'] 83564 3440 QDRLRALVVIP True PC9_epitope_Rep3 1278.77720465094 1278.7761099358602 18.358 2 -1.6363078089108583 0.4233051568616327 1.0 ['ENSG00000101017|ENST00000372285|CD40'] 90029 11467 RGGGGGAK True NCI_RA007_Epitope_Rep1 658.35107110886 658.35052496793 48.57 1 -1.6363609246102588 0.4233051568616327 1.0 ['nc|ENSG00000101746|O94818-2|NOL4', 'ENSG00000101746|ENST00000261592|NOL4'] 97293 11267 SFRLTSDLVF True PC9_epitope_Rep6 1183.62372370131 1183.62208490379 54.35 3 -1.6364136746388995 0.4233051568616327 1.0 ['nc|ENSG00000265763|Q96MN9-2|ZNF488', 'ENSG00000265763|ENST00000585316|ZNF488'] 61168 12650 LLDKNCHLL True H1975_Epitope_Rep1 1067.57975071435 1067.57917496793 53.711 1 -1.6364627705460255 0.4233230462013252 1.0 ['TRIM56|p.F497Sfs*35|1|0.12|ENSG00000169871|chr7:101088800-101088800|T/-|frameshift_variant', 'ENSG00000169871|ENST00000306085|TRIM56', 'TRIM56|p.P356H|1|0.2|ENSG00000169871|chr7:101088379-101088379|C/A|missense_variant'] 106413 17376 SVTIFFENNW True PC9_epitope_Rep5 1255.5873381925899 1255.58624993586 71.837 2 -1.6368785123739518 0.4233928611949443 1.0 ['TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion'] 18872 12533 ELEKLRQDFE True PC9_epitope_Rep1 1305.6564803815697 1305.65538993586 53.079 2 -1.6368866955448778 0.4233928611949443 1.0 ['ENSG00000155827|ENST00000389120|RNF20'] 126825 5300 VPSVPPVP True NCI_RA007_Epitope_Rep3 790.45889022234 790.45778993586 27.858 2 -1.6369268116501812 0.4234107489306663 1.0 ['nc|ENSG00000126337|O76013-2|KRT36', 'ENSG00000126337|ENST00000328119|KRT36', 'CON__O76013'] 21534 21576 ERRRRRRWHWH True H1975_Epitope_Rep1 1729.9362735298898 1729.9351699358601 89.661 2 -1.6370219072550114 0.42342730727778094 1.0 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 74937 9821 NLTGHKKRKH True H1975_Epitope_Rep3 1217.7105220734502 1217.70942993586 42.803 2 -1.637139215387939 0.42342730727778094 1.0 ['ENST00000483450.1_1_6:28962780-28967471:-|nuORF', 'ENSG00000197935|ENST00000377179|ZNF311'] 63295 22915 LPAVLEKQKT True H1975_Epitope_Rep2 1125.6757592741699 1125.67411490379 94.589 3 -1.6371519908127852 0.42342730727778094 1.0 ['RXYLT1|p.E399Q|1|0.37|ENSG00000118600|chr12:63808955-63808955|G/C|missense_variant'] 71438 12500 MIRGCGGG True PC9_epitope_Rep4 749.3312642644099 749.33016993586 55.893 2 -1.6372166765578744 0.42342730727778094 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 52558 15457 KPTDQRFEDLT True PC9_epitope_Rep2 1348.6622940379998 1348.6611899358602 64.733 2 -1.6373081748317662 0.42342730727778094 1.0 ['nc|ENSG00000188659|Q658L1-2|SAXO2', 'nc|ENSG00000188659|Q658L1|SAXO2', 'ENSG00000188659|ENST00000682753|SAXO2'] 108740 7478 TENEDHLAKEL True NCI_RA007_Epitope_Rep1 1297.6150094924099 1297.6139099358602 33.08 2 -1.6373998543010964 0.42342730727778094 1.0 ['nc|ENSG00000184588|Q07343-4|PDE4B', 'nc|ENSG00000184588|Q07343-2|PDE4B', 'nc|ENSG00000184588|Q07343-3|PDE4B', 'ENSG00000184588|ENST00000341517|PDE4B', 'PDE4B|p.E599Kfs*47|1|0.28|ENSG00000184588|chr1:66368918-66368918|G/-|frameshift_variant'] 25776 6064 FFTAAGTL True NCI_RA007_Epitope_Rep5 826.4225047136199 826.42140993586 30.006 2 -1.6374563299698106 0.4234338483879019 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2'] 83273 11849 QAETLFQEIFP True NCI_RA007_Epitope_Rep2 1321.65541775241 1321.65432993586 50.691 2 -1.6376648626870625 0.4234582747197894 1.0 ['ENSG00000203668|ENST00000366553|CHML'] 138268 23425 YQVIHKMRHK True PC9_epitope_Rep3 1338.7342942931402 1338.73318993586 95.381 2 -1.63772140357376 0.4234582747197894 1.0 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1', 'ENST00000506175.1_1_4:69188417-69195784:-|nuORF'] 121892 10157 VGPGPCPI True H1975_Epitope_Rep3 738.37344634622 738.37289496793 44.111 1 -1.6377521886717348 0.4234761596841711 1.0 ['ENST00000434284.1_1_X:153001256-153003714:-|nuORF'] 90115 18279 RGRRHRLQYR True NCI_RA007_Epitope_Rep5 1396.80246539568 1396.80082490379 77.114 3 -1.6378873041314683 0.4235280771412365 1.0 ['ZFR2|p.R698Gfs*6|1|0.19|ENSG00000105278|chr19:3816685-3816685|G/-|frameshift_variant', 'ENSG00000105278|ENST00000262961|ZFR2', 'ZFR2|p.V487L|1|0.33|ENSG00000105278|chr19:3822113-3822113|C/A|missense_variant'] 104705 10191 STCVLEFEM True NCI_RA007_Epitope_Rep1 1057.4460192331298 1057.44492993586 43.652 2 -1.6380550842842772 0.4235577032146827 1.0 ['PCDHGB3|p.L668Ffs*7|1|0.34|ENSG00000262209|chr5:141372395-141372396|-/T|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 68915 13398 LVFEVQQPFLF True PC9_epitope_Rep2 1365.7332741502898 1365.7316249037901 56.817 3 -1.6380960793019341 0.4235577032146827 1.0 ['ENSG00000149131|ENST00000278407|SERPING1', 'nc|ENSG00000149131|P05155-3|SERPING1', 'ENST00000528996.1_1_11:57374185-57382051:+|nuORF', 'nc|ENSG00000149131|P05155-2|SERPING1'] 61929 22342 LLLLQIRKAM True PC9_epitope_Rep3 1197.7631348099299 1197.76202993586 91.225 2 -1.638133458842091 0.4235577032146827 1.0 ['ENST00000451554.1_1_2:159145303-159312956:-|nuORF'] 77732 7000 PAAMDPVVG True PC9_epitope_Rep4 855.4160394341899 855.41494993586 34.172 2 -1.6382066052979845 0.4235577032146827 1.0 ['ENSG00000105771|ENST00000270066|SMG9', 'nc|ENSG00000105771|Q9H0W8-2|SMG9', 'ENST00000595700.5_1_19:44242246-44254893:-|nuORF'] 95869 19798 SDPLGHCP True NCI_RA007_Epitope_Rep5 824.34868815036 824.34758993586 83.064 2 -1.6382334276532755 0.4235577032146827 1.0 ['ENST00000495313.5_2_9:131038987-131046858:+|nuORF'] 23246 16043 EVRFYVPP True PC9_epitope_Rep6 1005.5283667644898 1005.52726993586 74.034 2 -1.6383022636657616 0.4235577032146827 1.0 ['ENSG00000149136|ENST00000278412|SSRP1', 'SSRP1|p.G212Vfs*45|1|0.14|ENSG00000149136|chr11:57332759-57332760|CA/T|frameshift_variant', 'ENST00000293880.9_1_11:57100225-57103093:-|nuORF'] 53671 23550 KWVILPLLK True H1975_Epitope_Rep2 1108.7372373319197 1108.73614993586 97.068 2 -1.6383477270950748 0.4235577032146827 1.0 ['ENST00000424203.5_1_21:34876433-34900844:-|nuORF'] 44185 24173 ILRFSDGLKNR True PC9_epitope_Rep5 1317.7517181790897 1317.7506299358602 97.968 2 -1.6383477514806075 0.4235577032146827 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|4|1|sense'] 43130 13392 IGPIQQII True PC9_epitope_Rep5 880.5382031721999 880.53710993586 56.529 2 -1.6383802727203354 0.42355810128735893 1.0 ['ENST00000367833.6_1_1:168154054-168154114:+|nuORF'] 28330 7719 FSAFTPTDLRF True NCI_RA007_Epitope_Rep5 1300.6451874218799 1300.6440899358602 36.391 2 -1.6384588272381426 0.42355810128735893 1.0 ['ENST00000176763.9_1_5:171470328-171470631:-|nuORF'] 120247 7637 VFPAPPAG True NCI_RA007_Epitope_Rep2 754.4013753462199 754.40026993586 34.33 2 -1.6385098492550982 0.42355810128735893 1.0 ['ENSG00000212123|ENST00000419421|PRR22'] 125270 19412 VLRLRSSS True NCI_RA007_Epitope_Rep5 916.5454138109601 916.54430993586 81.552 2 -1.6385892356962446 0.42355810128735893 1.0 ['nc|ENSG00000167994|Q8TBN0-2|RAB3IL1', 'ENSG00000167994|ENST00000394836|RAB3IL1'] 88905 3087 REARQAMIYHW True PC9_epitope_Rep3 1459.7142871245499 1459.71265490379 16.831 3 -1.6385895779981368 0.42355810128735893 1.0 ['ENSG00000167216|ENST00000683218|KATNAL2', 'nc|ENSG00000167216|Q8IYT4-2|KATNAL2'] 18496 5652 EKMKEQIRQWF True NCI_RA007_Epitope_Rep2 1521.7762186747698 1521.7745849037901 26.599 3 -1.638680057888147 0.42355810128735893 1.0 ['ENSG00000278685|ENST00000615129|IQCA1L'] 121357 24406 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 101.61 2 -1.638695238441078 0.42355810128735893 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 86445 24928 QQRPVKQTI True PC9_epitope_Rep3 1096.63529144452 1096.6341899358601 101.25 2 -1.63884909334004 0.4236213506340313 1.0 ['PIK3C2B|p.E492Q|1|0.25|ENSG00000133056|chr1:204460352-204460352|C/G|missense_variant'] 63669 12141 LPPLHPSAM True PC9_epitope_Rep2 961.50552314493 961.50442993586 52.011 2 -1.6389881653681124 0.4236505722095569 1.0 ['nc|ENSG00000131149|Q14687-2|GSE1', 'nc|ENSG00000131149|Q14687-3|GSE1', 'ENSG00000131149|ENST00000253458|GSE1', 'GSE1|p.P829Lfs*26|1|0.21|ENSG00000131149|chr16:85663456-85663457|CC/T|frameshift_variant', 'GSE1|p.D929Mfs*38|1|0.24|ENSG00000131149|chr16:85666001-85666001|G/-|frameshift_variant'] 113929 12949 TRINISLLKYQ True NCI_RA007_Epitope_Rep2 1347.7874349814701 1347.78632993586 54.991 2 -1.6391562993600934 0.42365884087558126 1.0 ['ENST00000515764.2_1_4:25930809-25931061:+|nuORF'] 103212 22903 SQRIQRPGR True PC9_epitope_Rep5 1096.62137271588 1096.62026993586 93.094 2 -1.6391937258192217 0.42365884087558126 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 80096 19194 PKGRIVPRGID True NCI_RA007_Epitope_Rep5 1206.71968977482 1206.71858993586 80.696 2 -1.6391978458385406 0.42365884087558126 1.0 ['ENSG00000177602|ENST00000325418|HASPIN'] 39811 15298 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 64.001 3 -1.6393429774473218 0.42368325545524654 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 78958 25426 PFHCQVRQD True NCI_RA007_Epitope_Rep5 1128.5134620596798 1128.51181490379 105.34 3 -1.639498096716324 0.42368325545524654 1.0 ['nc|ENSG00000163932|Q05655-2|PRKCD'] 112099 7193 TLTQNQAF True NCI_RA007_Epitope_Rep4 921.4555957470498 921.45448993586 34.293 2 -1.6396389888511884 0.4237011329998979 1.0 ['nc|ENSG00000150627|Q8IZU2|WDR17', 'ENSG00000150627|ENST00000508596|WDR17'] 58589 18230 LFERQMLKEER True NCI_RA007_Epitope_Rep1 1477.7711332943302 1477.77002993586 75.053 2 -1.639714233778332 0.42371420470654947 1.0 ['ENSG00000106246|ENST00000292478|PTCD1', 'ENST00000485746.1_1_7:99030561-99032532:-|nuORF'] 81229 22412 PPLVVSST True NCI_RA007_Epitope_Rep5 798.4487194614601 798.44762993586 93.375 2 -1.639718082259788 0.42371420470654947 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 104706 13964 STCVLEFEM True PC9_epitope_Rep1 1057.4460192331298 1057.44492993586 58.55 2 -1.6397724465351349 0.4237207403375068 1.0 ['PCDHGB3|p.L668Ffs*7|1|0.34|ENSG00000262209|chr5:141372395-141372396|-/T|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 122245 1261 VGRQVSHHYGY True H1975_Epitope_Rep1 1301.6265176659701 1301.6248649037902 6.5698 3 -1.6398500742706394 0.42372247045748374 1.0 ['ENST00000591201.5_1_19:1482125-1483918:-|nuORF', 'ENST00000441747.6_1_19:1482202-1488015:-|nuORF', 'ENSG00000115257|ENST00000300954|PCSK4'] 52434 16497 KPGRHSVRIT True NCI_RA007_Epitope_Rep4 1149.6730739355698 1149.67196993586 71.516 2 -1.6398646211752308 0.42372247045748374 1.0 ['ENST00000585917.5_1_19:28284461-28284521:+|nuORF'] 48127 24748 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 102.93 3 -1.6399455504311746 0.4237290057723494 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 126130 25469 VPERLLGTA True PC9_epitope_Rep5 954.5498304850598 954.54872993586 103.21 2 -1.6399962567639639 0.4237468813789975 1.0 ['ENSG00000100568|ENST00000554659|VTI1B'] 137438 13059 YLMWRNWQHKN True H1975_Epitope_Rep1 1574.7564862897 1574.7553899358602 55.317 2 -1.6400125752519212 0.42375341626881075 1.0 ['nc|ENSG00000147852|P98155-2|VLDLR', 'ENSG00000147852|ENST00000382100|VLDLR'] 90107 17011 RGRKRFVS True NCI_RA007_Epitope_Rep4 1004.5991807193199 1004.59808993586 73.715 2 -1.6402739990242772 0.4237826313760178 1.0 ['nc|ENSG00000150593|Q53EL6-2|PDCD4', 'ENSG00000150593|ENST00000280154|PDCD4'] 82182 7904 PTEPSTSSV True H1975_Epitope_Rep2 903.4185415319901 903.41744993586 35.35 2 -1.6403149427464037 0.4237891657122121 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 2561 8306 AERMVSMAWL True H1975_Epitope_Rep2 1192.5732854349199 1192.57218993586 36.9 2 -1.6404701178274201 0.4238022339400125 1.0 ['ENST00000446420.2_1_9:96233459-96233558:+|nuORF'] 88890 24514 REAPGKLS True H1975_Epitope_Rep1 856.4766655448 856.47556993586 101.59 2 -1.640470307887942 0.4238022339400125 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G', 'PIK3C2G|p.K900Rfs*29|1|0.36|ENSG00000139144|chr12:18491461-18491462|AG/-|frameshift_variant', 'PIK3C2G|p.G1094Efs*4|1|0.24|ENSG00000139144|chr12:18505418-18505418|G/-|frameshift_variant'] 58650 10213 LFGSLAGV True PC9_epitope_Rep1 762.42759009406 762.42648993586 44.163 2 -1.6406136519425523 0.4238314471684848 1.0 ['nc|ENSG00000214881|A8MWL7|TMEM14DP'] 95946 4688 SDYSFSVIAMS True PC9_epitope_Rep2 1205.52744035797 1205.52634993586 23.401 2 -1.6407839902930137 0.4238689193786144 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 77151 13316 NYEKIYKEIEC True H1975_Epitope_Rep1 1430.6751672208197 1430.6740699358602 56.324 2 -1.6407917753758305 0.4238689193786144 1.0 ['ENSG00000163634|ENST00000295899|THOC7'] 41093 24323 HYLRRSSP True H1975_Epitope_Rep3 1014.53591175642 1014.53480993586 101.29 2 -1.64081951854656 0.4238689193786144 1.0 ['MINDY4|p.W431*|2|0.17|ENSG00000106125|chr7:30839252-30839252|G/-|frameshift_variant', 'ENSG00000106125|ENST00000265299|MINDY4'] 119025 6671 VEGASARWAA True PC9_epitope_Rep3 1016.5039429217999 1016.50284993586 30.683 2 -1.6408379680034824 0.4238689193786144 1.0 ['FNBP4-PVRL1|1|fusion'] 119207 18813 VEKMRKCL True PC9_epitope_Rep1 1005.5463424110899 1005.5452499358599 77.151 2 -1.6409475579902977 0.42387237227022245 1.0 ['ENSG00000128731|ENST00000261609|HERC2', 'HERC2|p.T1779Pfs*10|1|0.14|ENSG00000128731|chr15:28228348-28228348|C/-|frameshift_variant'] 48830 11239 KERQEQRQRHE True H1975_Epitope_Rep3 1522.7712844066998 1522.7701899358601 48.334 2 -1.6410313652409543 0.42387237227022245 1.0 ['ENST00000394009.4_1_14:74486078-74489636:+|nuORF'] 32529 22535 GGRVGRRVFG True PC9_epitope_Rep6 1059.6049943757498 1059.60388993586 99.694 2 -1.6410524332795844 0.42387237227022245 1.0 ['ENST00000591358.1_1_19:1393133-1393403:+|nuORF'] 34975 9595 GRAAAAIPT True PC9_epitope_Rep4 826.4661008611 826.4655549679301 44.533 1 -1.6410685666438982 0.42387237227022245 1.0 ['ENST00000395348.7_1_10:61444064-61469743:-|nuORF'] 38973 4010 HIYTYQWRQTI True PC9_epitope_Rep3 1507.75719748235 1507.75555490379 20.535 3 -1.641180763463363 0.4238902432110664 1.0 ['NID1|p.R603H|1|0.38|ENSG00000116962|chr1:236026072-236026072|C/T|missense_variant'] 63870 10529 LPVDGRPLP True NCI_RA007_Epitope_Rep5 962.5549158654999 962.55380993586 47.134 2 -1.6413886946416945 0.42393079051204136 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 138123 18662 YQIVLLYIICI True H1975_Epitope_Rep2 1352.7777818145598 1352.77668993586 77.455 2 -1.641512270587588 0.423968253968254 1.0 ['ENST00000553612.5_1_14:81644196-81644316:-|nuORF'] 49579 26248 KKKKGGGG True PC9_epitope_Rep5 758.4762716219798 758.47516993586 106.74 2 -1.641569266255607 0.423968253968254 1.0 ['nc|ENSG00000100490|Q00532-2|CDKL1'] 2853 6989 AEWDQKEL True PC9_epitope_Rep5 1017.4767251144499 1017.47562993586 31.85 2 -1.6415903400649359 0.423968253968254 1.0 ['ENST00000534433.5_1_11:134123494-134128911:+|nuORF', 'ENST00000528325.5_1_11:134126509-134129738:+|nuORF', 'ENST00000531338.5_1_11:134126482-134132106:+|nuORF', 'ENSG00000151498|ENST00000281182|ACAD8'] 99007 6269 SKLREYQQYH True PC9_epitope_Rep6 1350.6680481247802 1350.6669499358602 32.618 2 -1.6416197381975342 0.423968253968254 1.0 ['ENSG00000198178|ENST00000360345|CLEC4C', 'nc|ENSG00000198178|Q8WTT0-2|CLEC4C'] 128052 24130 VRRLKVNE True PC9_epitope_Rep4 1012.6141620771199 1012.61306993586 101.3 2 -1.6416843246858885 0.42397478486638474 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1'] 60897 21286 LKRRIWRMPLF True H1975_Epitope_Rep2 1514.9020283245798 1514.9003849037902 88.088 3 -1.6417670254867212 0.42398131561642594 1.0 ['ENST00000577847.1_1_17:18087769-18087952:-|nuORF'] 136598 11110 YHYLNPYYKFI True NCI_RA007_Epitope_Rep5 1519.7499868435896 1519.74888993586 49.369 2 -1.6418452660405678 0.4239991837012346 1.0 ['SFSWAP|p.D246Y|1|0.18|ENSG00000061936|chr12:131725534-131725534|G/T|missense_variant'] 124402 5564 VLEEGVLNPE True NCI_RA007_Epitope_Rep2 1097.5604547384098 1097.5593499358602 26.258 2 -1.6419954913841328 0.4240122442038433 1.0 ['ENSG00000138801|ENST00000265174|PAPSS1'] 80547 8447 PLLVKVKAQ True PC9_epitope_Rep1 994.65390163078 994.65280993586 37.328 2 -1.642043604487144 0.4240122442038433 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 117937 10149 VARCPPCL True PC9_epitope_Rep5 857.4251646492498 857.42406993586 44.025 2 -1.6421661788230202 0.42402530411418593 1.0 ['nc|ENSG00000162413|Q9UJP4-2|KLHL21', 'ENSG00000162413|ENST00000377658|KLHL21'] 58844 23106 LFRPRNGR True PC9_epitope_Rep4 1014.5835306551799 1014.58242993586 97.096 2 -1.6421804049484192 0.42402530411418593 1.0 ['ENSG00000109255|ENST00000264218|NMU', 'ENST00000515325.5_1_4:56465315-56502750:-|nuORF', 'ENSG00000204640|ENST00000376865|NMS'] 16253 21744 EEHHGSLE True H1975_Epitope_Rep2 936.3937237664799 936.39262993586 89.947 2 -1.6423107201796916 0.4240545075276619 1.0 ['CFAP47|p.D1508H|1|0.69|ENSG00000165164|chrX:36073195-36073195|G/C|missense_variant'] 61092 18030 LLCLDPALPV True NCI_RA007_Epitope_Rep5 1052.59400379616 1052.59290993586 76.15 2 -1.6424601353697137 0.4240723735673231 1.0 ['ENST00000464833.1_1_3:184102666-184104037:+|nuORF'] 83902 9995 QEIRMMSHLNH True H1975_Epitope_Rep2 1394.6547236431 1394.6536299358602 43.437 2 -1.6425093878822679 0.4240789026187507 1.0 ['MAP3K1|p.E1293Q|1|0.22|ENSG00000095015|chr5:56884721-56884721|G/C|missense_variant'] 81790 11696 PSEWGSEDLS True H1975_Epitope_Rep2 1105.45638359269 1105.45528993586 50.063 2 -1.6427004484302945 0.4240954021946132 1.0 ['nc|ENSG00000223519|B7ZC32|KIF28P'] 86992 19853 QRWNRFIL True PC9_epitope_Rep6 1131.63014649443 1131.6290499358602 89.023 2 -1.6427720716020704 0.4240954021946132 1.0 ['ENST00000547994.5_1_12:56718022-56726878:-|nuORF', 'ENST00000551359.5_1_12:56713025-56726878:-|nuORF', 'ENSG00000135473|ENST00000440411|PAN2', 'nc|ENSG00000135473|Q504Q3-3|PAN2', 'nc|ENSG00000135473|Q504Q3|PAN2', 'ENST00000548982.1_1_12:56717776-56718181:-|nuORF'] 59349 13639 LGKLEPHVF True NCI_RA007_Epitope_Rep4 1038.58621599378 1038.5851099358601 59.684 2 -1.642998088433121 0.4240954021946132 1.0 ['ENSG00000099331|ENST00000682292|MYO9B', 'nc|ENSG00000099331|Q13459-2|MYO9B', 'ENST00000593411.1_1_19:17213013-17214246:+|nuORF'] 115025 23788 TTMIAILK True PC9_epitope_Rep5 889.53067526361 889.52956993586 96.481 2 -1.6430774910223738 0.4240954021946132 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 120609 23464 VGAGKRKRRHS True PC9_epitope_Rep1 1250.7432191840599 1250.74267496793 95.04 1 -1.6430803418439657 0.4240954021946132 1.0 ['ENSG00000145220|ENST00000343470|LYAR'] 137439 13052 YLMWRNWQHKN True H1975_Epitope_Rep3 1574.7564862897 1574.7553899358602 55.444 2 -1.6431052885835267 0.4240954021946132 1.0 ['nc|ENSG00000147852|P98155-2|VLDLR', 'ENSG00000147852|ENST00000382100|VLDLR'] 131659 16447 VWIMPSIRNH True PC9_epitope_Rep5 1251.65464699011 1251.6535499358602 68.262 2 -1.643132369813371 0.4241019304669168 1.0 ['BRIP1|p.T1062Ifs*18|1|0.25|ENSG00000136492|chr17:61683860-61683861|TG/-|frameshift_variant'] 124033 2175 VKNCLDYHISV True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 11.662 3 -1.6431596055132802 0.4241084585912172 1.0 ['ENST00000567330.1_1_16:75743035-75743521:-|nuORF'] 1740 16060 AEGTARQPLPI True PC9_epitope_Rep2 1151.6298717109098 1151.6287699358602 67.03 2 -1.6431920784179845 0.424137657420737 1.0 ['ENST00000537670.5_1_15:66855926-66858216:-|nuORF'] 44178 18044 ILQWLVPVV True PC9_epitope_Rep2 1065.65865265805 1065.65754993586 74.711 2 -1.6432281668360662 0.4241441849920653 1.0 ['chr8:127290060-127311920|196|16.7|0.02|9.43|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|46', 'chr8:127290060-127311835|257|24.31|0.0|12.5|-|1|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311835,127315431|CASC8,None|46', 'chr6:109250991-109254448|382|11.17|0.13|6.42|+|2|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|61', 'chr2:113477199-113482177|379|28.75|0.21|7.07|+|2|TE_info:L1PA3,L1PA3_dup1127,L1,LINE,donor,-,113471482,113477199|None,ZNG1B|68', 'chr1:245814415-245816795|376|16.24|0.01|10.82|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|67', 'chr1:245764149-245816795|362|34.57|0.05|9.58|-|0|TE_info:L1PA3,L1PA3_dup734,L1,LINE,donor,+,245816795,245822560|SMYD3,None|67', 'chr15:53523322-53684228|265|18.12|0.04|8.74|-|1|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|70'] 93419 18724 RRYKLQKQ True NCI_RA007_Epitope_Rep4 1118.6672602791398 1118.6661699358601 81.008 2 -1.643382494989305 0.42416857473192626 1.0 ['ENST00000473916.1_1_6:30891971-30893984:+|nuORF', 'nc|ENSG00000137411|Q5ST30-2|VARS2', 'ENST00000469358.5_1_6:30889720-30893984:+|nuORF', 'ENST00000477288.5_1_6:30884740-30893984:+|nuORF', 'nc|ENSG00000137411|Q5ST30-3|VARS2', 'ENSG00000137411|ENST00000676266|VARS2', 'nc|ENSG00000137411|Q5ST30-4|VARS2'] 55054 18427 LALFTHST True NCI_RA007_Epitope_Rep4 888.4705175352 888.46942993586 79.746 2 -1.6434013993020702 0.42416857473192626 1.0 ['ENST00000498793.5_1_1:41503212-41512322:-|nuORF'] 115089 25395 TTTVIVPVVV True PC9_epitope_Rep2 1026.6324974798597 1026.6319749679299 103.36 1 -1.6434493124778802 0.42417510173084116 1.0 ['GPR176|p.I211T|1|0.16|ENSG00000166073|chr15:39802048-39802048|A/G|missense_variant'] 123274 24376 VHRHRQLA True PC9_epitope_Rep2 1015.57877962791 1015.57768993586 99.329 2 -1.643581909223641 0.4241929633659775 1.0 ['ENSG00000213983|ENST00000397120|AP1G2', 'ENST00000553629.5_1_14:24035015-24036984:-|nuORF', 'ENST00000556277.5_1_14:24034355-24036984:-|nuORF', 'ENST00000553685.1_1_14:24036229-24036984:-|nuORF'] 14963 25127 DYRLLPKL True H1975_Epitope_Rep2 1016.6018660579199 1016.60076993586 103.24 2 -1.6437765839996614 0.4242400199487679 1.0 ['nc|ENSG00000198925|Q7Z3C6-3|ATG9A'] 32150 22650 GFCPAVLC True H1975_Epitope_Rep2 808.3611674103599 808.36006993586 93.563 2 -1.6437814537937376 0.4242400199487679 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 68931 25476 LVFRKPRGLFI True NCI_RA007_Epitope_Rep3 1344.8394109846797 1344.83776490379 110.13 3 -1.6441025835401146 0.4242465458419758 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 127179 5385 VQFFFLFP True NCI_RA007_Epitope_Rep2 1043.5480395799098 1043.54694993586 25.565 2 -1.644189275549865 0.42425307158725123 1.0 ['ENST00000444196.1_1_2:175352141-175352219:+|nuORF'] 34243 17613 GPKKTKRE True H1975_Epitope_Rep3 942.5610638750999 942.55996993586 73.586 2 -1.6443685231962666 0.42425959718459916 1.0 ['ENSG00000154767|ENST00000285021|XPC', 'nc|ENSG00000154767|Q01831-2|XPC'] 13117 10302 DLSKYSIFF True H1975_Epitope_Rep3 1118.5648118428599 1118.56370993586 44.68 2 -1.6445257855882311 0.4242661226340247 1.0 ['TLR7|p.N503Y|1|0.34|ENSG00000196664|chrX:12887015-12887015|A/T|missense_variant'] 4382 9968 AIQVVENK True H1975_Epitope_Rep1 899.5076313199099 899.50652993586 43.278 2 -1.6446040659497345 0.4242726479355329 1.0 ['ENSG00000088538|ENST00000266037|DOCK3', 'MAPKAPK3-DOCK3|1|fusion'] 122384 13133 VGSFSASL True PC9_epitope_Rep2 766.3861192049 766.38502993586 55.788 2 -1.6447740032364104 0.4243018406020491 1.0 ['ENSG00000184530|ENST00000329722|C6orf58'] 118584 17187 VEAEEPPQE True NCI_RA007_Epitope_Rep1 1026.4505699362596 1026.4499749679298 70.987 1 -1.6448999956194617 0.42430836535083244 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant', 'SRCAP|p.N716Ifs*24|1|0.21|ENSG00000080603|chr16:30713222-30713244|CAATGCCTTTCATGTGTGTATCA/-|frameshift_variant'] 30906 20532 GASATCTP True H1975_Epitope_Rep3 706.29558994834 706.29504496793 85.824 1 -1.645057749277566 0.42435541451804837 1.0 ['NTNG2|p.A203Qfs*166|1|0.24|ENSG00000196358|chr9:132198357-132198357|G/-|frameshift_variant'] 38348 8062 HGATRGGP True NCI_RA007_Epitope_Rep1 751.3725348294299 751.3719849679301 35.357 1 -1.6450887443013937 0.42435541451804837 1.0 ['ENST00000565181.1_1_15:72766821-72767304:-|nuORF'] 65285 5842 LSEKCEEPQ True NCI_RA007_Epitope_Rep1 1061.46992548185 1061.4688299358602 26.777 2 -1.6452334050064374 0.42435712909550416 1.0 ['nc|ENSG00000113494|P16471-2|PRLR', 'ENSG00000113494|ENST00000618457|PRLR'] 125489 5259 VLVIKARKLPP True PC9_epitope_Rep3 1232.8332629750798 1232.83216993586 25.309 2 -1.6452574824112773 0.42435712909550416 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 11001 17444 DDEVSFSQL True PC9_epitope_Rep6 1038.4505699362599 1038.4494699358602 79.715 2 -1.6454971680702237 0.4243801278273877 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 3434 20603 AGLAVAGP True H1975_Epitope_Rep1 654.37007521794 654.36952496793 85.666 1 -1.6455657849290612 0.4243801278273877 1.0 ['ENST00000451608.2_1_2:74475609-74479477:-|nuORF'] 97244 5006 SFMGYLRIFSP True H1975_Epitope_Rep3 1316.6587293110397 1316.65762993586 24.381 2 -1.6456007867981568 0.4243801278273877 1.0 ['nc|ENSG00000122507|Q3SYG4-6|BBS9', 'BBS9|p.V734*|1|0.27|ENSG00000122507|chr7:33505546-33505546|G/-|frameshift_variant', 'nc|ENSG00000122507|Q3SYG4-2|BBS9', 'nc|ENSG00000122507|Q3SYG4-4|BBS9', 'nc|ENSG00000122507|Q3SYG4-7|BBS9', 'nc|ENSG00000122507|Q3SYG4-3|BBS9', 'ENSG00000122507|ENST00000242067|BBS9'] 131555 15336 VVVLLSAE True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 65.691 2 -1.6456334579265697 0.4243801278273877 1.0 ['PIK3AP1-TM9SF3|1|fusion', 'ENSG00000155629|ENST00000339364|PIK3AP1'] 119870 20332 VEVTEEHKP True NCI_RA007_Epitope_Rep1 1066.5294889633 1066.52897496793 83.296 1 -1.6456709109939287 0.4243801278273877 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant'] 60977 9178 LLAFLLCP True NCI_RA007_Epitope_Rep2 888.51429692348 888.5131899358599 40.308 2 -1.6456846478039808 0.4243801278273877 1.0 ['ENST00000335793.3_1_17:71280809-71281388:-|nuORF'] 38197 23086 HETGHVLG True H1975_Epitope_Rep2 848.41406528824 848.41296993586 95.263 2 -1.6457026196731368 0.4243801278273877 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 75322 5026 NPWMTEYMRCY True H1975_Epitope_Rep1 1492.59376317932 1492.5926699358602 24.403 2 -1.645770648205606 0.4243818416698774 1.0 ['nc|ENSG00000154429|Q6IQ19-2|CCSAP', 'ENST00000483092.1_1_1:229460984-229462796:-|nuORF', 'ENSG00000154429|ENST00000284617|CCSAP'] 86465 5320 QQSLYLHRYYF True PC9_epitope_Rep5 1516.7462984454799 1516.7446649037902 25.476 3 -1.6457992117303735 0.4243818416698774 1.0 ['ENSG00000221926|ENST00000649191|TRIM16', 'nc|ENSG00000291110|Q309B1|TRIM16L', 'nc|ENSG00000221926|O95361-2|TRIM16'] 63791 11865 LPSKPLQDR True NCI_RA007_Epitope_Rep2 1052.5978433066398 1052.59674993586 50.754 2 -1.6458369834253774 0.42438836447697936 1.0 ['ENSG00000173276|ENST00000310826|ZBTB21', 'nc|ENSG00000173276|Q9ULJ3-2|ZBTB21'] 72033 9030 MQNVHLAP True NCI_RA007_Epitope_Rep3 908.4538219252398 908.45272993586 42.615 2 -1.6459306724386527 0.4244017403915881 1.0 ['nc|ENSG00000032742|Q13099-3|IFT88', 'ENSG00000032742|ENST00000351808|IFT88', 'nc|ENSG00000032742|Q13099-1|IFT88', 'IFT88|p.K453Rfs*5|1|0.18|ENSG00000032742|chr13:20631041-20631041|A/-|frameshift_variant'] 18082 14016 EIKKLSLLKKH True PC9_epitope_Rep5 1335.8602059989098 1335.85855490379 58.93 3 -1.6460094446751947 0.4244017403915881 1.0 ['ENST00000568808.5_1_15:55653104-55669251:-|nuORF'] 63939 6472 LPWYLLTFR True NCI_RA007_Epitope_Rep5 1207.67536535135 1207.67371490379 31.56 3 -1.6460383805656018 0.4244017403915881 1.0 ['ENST00000490889.2_1_3:9372279-9404666:-|nuORF', 'ENST00000518331.1_1_3:9379357-9404666:-|nuORF', 'ENST00000466431.6_1_3:9391695-9404624:-|nuORF', 'ENST00000491930.2_1_3:9367773-9404666:-|nuORF'] 80094 19168 PKGRIVPRGID True NCI_RA007_Epitope_Rep4 1206.71968977482 1206.71858993586 82.877 2 -1.6460394811817218 0.4244017403915881 1.0 ['ENSG00000177602|ENST00000325418|HASPIN'] 16989 16497 EGIAEWLRRR True NCI_RA007_Epitope_Rep2 1284.7051023398399 1284.70400993586 68.897 2 -1.6460736478002913 0.4244017403915881 1.0 ['nc|ENSG00000185615|Q13087-2|PDIA2', 'ENSG00000185615|ENST00000219406|PDIA2', 'ENST00000482665.1_1_16:334415-335240:+|nuORF'] 107905 21752 TAVHKANIMKL True PC9_epitope_Rep6 1224.7012628293598 1224.69961490379 96.562 3 -1.6461018105654739 0.4244017403915881 1.0 ['ENSG00000067829|ENST00000217901|IDH3G', 'nc|ENSG00000067829|P51553-2|IDH3G', 'nc|ENSG00000101365|O43837-3|IDH3B', 'nc|ENSG00000101365|O43837-2|IDH3B', 'ENSG00000101365|ENST00000380843|IDH3B'] 110958 15341 TLCSLHSVFDL True PC9_epitope_Rep3 1233.60635938501 1233.6047249037902 64.166 3 -1.6461830713220373 0.4244017403915881 1.0 ['TNXB|p.G147S|1|0.2|ENSG00000168477|chr6:32097414-32097414|C/T|missense_variant'] 85214 21676 QKHWLFKHLF True PC9_epitope_Rep6 1382.76116066398 1382.7600699358602 96.262 2 -1.6462061844309626 0.4244017403915881 1.0 ['TG|p.V2411Gfs*5|1|0.24|ENSG00000042832|chr8:133030004-133030005|-/CCGGAGAG|frameshift_variant', 'nc|ENSG00000042832|P01266-2|TG', 'ENSG00000042832|ENST00000220616|TG'] 26921 20213 FLGTAKLYRL True PC9_epitope_Rep3 1180.6968290719199 1180.69572993586 83.008 2 -1.6462959168632108 0.4244017403915881 1.0 ['SLIT2|p.N183Tfs*60|1|0.21|ENSG00000145147|chr4:20486207-20486207|A/-|frameshift_variant', 'ENSG00000145147|ENST00000504154|SLIT2', 'nc|ENSG00000145147|O94813-3|SLIT2', 'nc|ENSG00000145147|O94813-2|SLIT2', 'SLIT2|p.A421Pfs*21|1|0.12|ENSG00000145147|chr4:20523888-20523888|G/-|frameshift_variant'] 114397 13679 TSDQRYVLYP True H1975_Epitope_Rep3 1240.6088019131598 1240.6077099358602 57.91 2 -1.6464023350610013 0.4244195927801761 1.0 ['ENSG00000213614|ENST00000268097|HEXA', 'ENST00000563908.1_1_15:72647792-72668286:-|nuORF', 'HEXA-BBS4|1|fusion'] 114553 21167 TSILRKTTTV True PC9_epitope_Rep6 1118.66592286646 1118.66482993586 94.265 2 -1.6464686412040723 0.4244295393260973 1.0 ['CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF'] 66199 15079 LSPLRPPSV True PC9_epitope_Rep1 964.5705659296399 964.56946993586 62.82 2 -1.646473463464558 0.4244295393260973 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant', 'KMT2D|p.A3440Vfs*11|1|0.21|ENSG00000167548|chr12:49034848-49034848|G/-|frameshift_variant', 'KMT2D|p.Q3370Pfs*53|2|0.24|ENSG00000167548|chr12:49037247-49037248|-/G|frameshift_variant', 'KMT2D|p.V3089Wfs*30|1|0.39|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant', 'KMT2D|p.R3082Gfs*14|1|0.2|ENSG00000167548|chr12:49038108-49038112|TCCCG/-|frameshift_variant', 'KMT2D|p.R2687Qfs*4|1|0.4|ENSG00000167548|chr12:49039604-49039604|C/-|frameshift_variant', 'KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant'] 21409 5822 ERNHWHYRDLE True H1975_Epitope_Rep1 1553.71237254825 1553.7112699358602 27.465 2 -1.6464878850427462 0.4244295393260973 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 128612 5897 VSKSQKIR True NCI_RA007_Epitope_Rep4 944.5767139392399 944.57560993586 29.306 2 -1.64649205019242 0.4244295393260973 1.0 ['ENST00000571277.1_1_16:11655255-11655408:-|nuORF'] 111765 22910 TLQNEWPLL True PC9_epitope_Rep2 1112.5866099165999 1112.58550993586 93.63 2 -1.6465086329947416 0.4244295393260973 1.0 ['nc|ENSG00000101265|P50749-2|RASSF2', 'ENST00000478553.1_1_20:4768339-4773698:-|nuORF'] 35815 7900 GTYRTLDPD True NCI_RA007_Epitope_Rep1 1036.4825387708797 1036.48197496793 34.721 1 -1.646572017852387 0.4244312516994471 1.0 ['ENSG00000119457|ENST00000374228|SLC46A2'] 44665 4444 IPLPTRPHWFL True PC9_epitope_Rep4 1375.7764763749499 1375.7748449037902 23.554 3 -1.646609971454565 0.4244312516994471 1.0 ['ENSG00000163660|ENST00000295926|CCNL1', 'nc|ENSG00000163660|Q9UK58-6|CCNL1', 'ENST00000476367.5_1_3:156867074-156874849:-|nuORF', 'ENST00000474539.5_1_3:156866032-156868247:-|nuORF', 'ENST00000470121.5_1_3:156866032-156869342:-|nuORF', 'ENST00000481173.1_1_3:156867820-156868247:-|nuORF', 'ENST00000464679.5_1_3:156867272-156869982:-|nuORF'] 690 20966 AAVEPTWKC True PC9_epitope_Rep5 1003.47970231991 1003.47860993586 85.705 2 -1.6467311729417335 0.4244491021356143 1.0 ['ENST00000403491.7_1_1:61548275-61548326:+|nuORF'] 15754 13127 EDEELTRIFVM True NCI_RA007_Epitope_Rep2 1380.65951715668 1380.6584099358602 55.692 2 -1.646750442780583 0.4244556227766071 1.0 ['nc|ENSG00000155636|Q8IUH3-2|RBM45', 'ENST00000424000.6_1_2:178977216-178988379:+|nuORF', 'RBM45|p.A384Lfs*7|1|0.37|ENSG00000155636|chr2:178124193-178124193|A/-|frameshift_variant', 'ENSG00000155636|ENST00000286070|RBM45', 'nc|ENSG00000155636|Q8IUH3|RBM45'] 29499 25285 FVIFMFFLN True NCI_RA007_Epitope_Rep1 1176.6041745570399 1176.60253490379 104.62 3 -1.6471409954421017 0.42455277736866553 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 111116 8697 TLELGDRTA True PC9_epitope_Rep2 974.5032742154599 974.50216993586 38.816 2 -1.6473067705305608 0.4245723348816132 1.0 ['nc|ENSG00000133401|O15018-2|PDZD2', 'ENSG00000133401|ENST00000438447|PDZD2', 'ENST00000502489.5_1_5:31983264-32077762:+|nuORF'] 60488 16228 LIMMVALV True PC9_epitope_Rep5 888.5176680517599 888.51656993586 67.41 2 -1.6474558603440101 0.4245723348816132 1.0 ['nc|ENSG00000078295|Q08462-2|ADCY2', 'ADCY2|p.G942Wfs*61|2|0.3|ENSG00000078295|chr5:7804630-7804631|-/T|frameshift_variant', 'ENSG00000078295|ENST00000338316|ADCY2'] 29768 6424 FVSFRQVCFC True NCI_RA007_Epitope_Rep1 1234.5627207512198 1234.56162993586 29.011 2 -1.647483027344549 0.4245723348816132 1.0 ['ENST00000513482.1_1_5:175387875-175387965:-|nuORF'] 86344 19863 QQKMWFTENQR True H1975_Epitope_Rep3 1494.7037820105 1494.70268993586 83.161 2 -1.6475680607724197 0.42458708113374266 1.0 ['ENSG00000177354|ENST00000374144|C10orf71'] 29945 3204 FWWLGFFFYLR True NCI_RA007_Epitope_Rep2 1580.7968774663595 1580.79469987172 17.11 4 -1.6475960848546127 0.42458708113374266 1.0 ['ENST00000275884.10_1_7:140218236-140218428:-|nuORF'] 85371 9053 QLDVSHTLQ True PC9_epitope_Rep5 1039.52982331647 1039.5287299358602 39.767 2 -1.6476520718691934 0.42458708113374266 1.0 ['ENSG00000214946|ENST00000437605|TBC1D26', 'nc|ENSG00000214946|Q86UD7-2|TBC1D26', 'ENSG00000189375|ENST00000405044|TBC1D28', 'nc|ENSG00000214946|Q86UD7|TBC1D26'] 128756 8372 VSQDRKVP True H1975_Epitope_Rep2 927.5137793295098 927.51268993586 37.156 2 -1.6476589950785152 0.42458708113374266 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 38200 20622 HETGHVLG True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 86.264 2 -1.6476991715521605 0.4245935995468706 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 28748 14382 FSYTARKLP True PC9_epitope_Rep2 1081.59202965021 1081.59092993586 60.582 2 -1.6477948241248646 0.42461144591961575 1.0 ['ENST00000590761.1_17:34640712-34640859:+|nuORF', 'nc|ENSG00000276070|Q8NHW4-5|CCL4L1', 'nc|ENSG00000276070|Q8NHW4-6|CCL4L1', 'nc|ENSG00000276070|Q8NHW4-2|CCL4L1', 'nc|ENSG00000276070|Q8NHW4|CCL4L1', 'ENSG00000275302|ENST00000615863|CCL4', 'nc|ENSG00000276070|Q8NHW4-3|CCL4L1', 'nc|ENSG00000276070|Q8NHW4-10|CCL4L1', 'ENSG00000276070|ENST00000617405|CCL4L2'] 58106 6404 LERTVPTAAGH True NCI_RA007_Epitope_Rep3 1150.6094706195 1150.60836993586 32.196 2 -1.647913057032201 0.424617963909059 1.0 ['ENST00000259351.9_1_9:129677065-129724587:+|nuORF'] 3530 10007 AGLVPALQW True NCI_RA007_Epitope_Rep5 953.5334521449299 953.53234993586 45.134 2 -1.6481164001235706 0.4246327069244798 1.0 ['ENST00000470417.1_1_2:121010459-121047172:+|nuORF'] 53186 9055 KSVPPKPA True NCI_RA007_Epitope_Rep2 822.49633836022 822.49524993586 39.825 2 -1.648136933841702 0.4246327069244798 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 134488 16888 WTVIQNRQD True H1975_Epitope_Rep2 1158.57817049122 1158.57652490379 70.205 3 -1.648150700352803 0.4246327069244798 1.0 ['ENSG00000171564|ENST00000302068|FGB', 'CON__P02676'] 27490 19999 FPDFYPNN True NCI_RA007_Epitope_Rep5 1012.42904664604 1012.4279499358599 83.843 2 -1.6481748794853033 0.4246327069244798 1.0 ['nc|ENSG00000121904|Q7Z408|CSMD2', 'ENSG00000121904|ENST00000373381|CSMD2'] 118675 9642 VEARRHQRLQ True NCI_RA007_Epitope_Rep1 1291.7221493863099 1291.72104993586 41.505 2 -1.6482811068000855 0.42463441432665405 1.0 ['ENST00000606619.1_1_13:52767360-52768512:-|nuORF', 'ENST00000606974.5_1_13:52760947-52768512:-|nuORF', 'ENST00000423686.1_1_13:52763934-52768509:-|nuORF', 'ENST00000416599.5_1_13:52768206-52768563:-|nuORF'] 10403 10524 CLFHFGNW True PC9_epitope_Rep5 1022.44325724154 1022.4421499358599 45.468 2 -1.648325758441529 0.42463441432665405 1.0 ['ENST00000518225.5_1_8:25316927-25317966:+|nuORF'] 69826 6549 LWWWSWRWWKL True NCI_RA007_Epitope_Rep1 1731.88267277899 1731.8810249037901 29.489 3 -1.648432583883084 0.4246361216514697 1.0 ['chr12:54282611-54283827|502|64.93|0.0|22.63|+|1|HNRNPA1,HNRNPA1|1'] 13278 16856 DLWLYSYQRLL True H1975_Epitope_Rep1 1468.77145056416 1468.7703499358602 70.246 2 -1.648500064270574 0.4246361216514697 1.0 ['nc|ENSG00000036549|Q8IYH5-3|ZZZ3'] 58203 20810 LESQHLWYHRL True PC9_epitope_Rep1 1480.75753183552 1480.75642993586 84.873 2 -1.648682340302869 0.4246539655211472 1.0 ['ENSG00000053328|ENST00000338882|METTL24'] 20090 7463 ENHRPAYW True PC9_epitope_Rep2 1071.48862721083 1071.48752993586 34.08 2 -1.6488220332635648 0.42470578907426915 1.0 ['nc|ENSG00000167670|Q13111-2|CHAF1A', 'nc|ENSG00000167670|Q13111-3|CHAF1A', 'ENSG00000167670|ENST00000301280|CHAF1A'] 115033 21846 TTNGKGCH True H1975_Epitope_Rep2 816.3548361599601 816.35372993586 90.339 2 -1.6489150048999404 0.42471602169899997 1.0 ['IFNL1|p.T30N|1|0.35|ENSG00000182393|chr19:39296510-39296510|C/A|missense_variant'] 102106 8559 SPQEVLSPA True PC9_epitope_Rep6 926.4709114580198 926.46980993586 42.691 2 -1.6489218249568576 0.42471602169899997 1.0 ['ENST00000328914.4_1_7:4806266-4806500:+|nuORF'] 25727 13810 FFLEARLKHYY True H1975_Epitope_Rep3 1485.7768702977698 1485.7757699358601 58.425 2 -1.648972764542293 0.42471602169899997 1.0 ['ENST00000178638.7_1_15:63615668-63615971:-|nuORF'] 19457 19520 ELPVNYVKPP True NCI_RA007_Epitope_Rep2 1154.63356010902 1154.6324699358602 80.867 2 -1.649024159097294 0.42471602169899997 1.0 ['ENSG00000165288|ENST00000373275|BRWD3', 'nc|ENSG00000165288|Q6RI45-5|BRWD3', 'ENST00000478415.1_1_X:79999455-80064970:-|nuORF'] 121411 2717 VGHVVRFG True PC9_epitope_Rep1 869.4871706588499 869.48606993586 14.868 2 -1.6490547646868374 0.42471602169899997 1.0 ['ENSG00000163798|ENST00000326019|SLC4A1AP', 'nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP'] 39665 10129 HPTARLLL True PC9_epitope_Rep2 919.56033559911 919.55922993586 44.299 2 -1.6491150272859596 0.42471602169899997 1.0 ['nc|ENSG00000137343|Q5SQI0-7|ATAT1', 'nc|ENSG00000137343|Q5SQI0-6|ATAT1', 'nc|ENSG00000137343|Q5SQI0-5|ATAT1', 'nc|ENSG00000137343|Q5SQI0-4|ATAT1', 'nc|ENSG00000137343|Q5SQI0-3|ATAT1', 'ENSG00000137343|ENST00000330083|ATAT1', 'nc|ENSG00000137343|Q5SQI0|ATAT1'] 35237 4759 GSHSVGWNMP True NCI_RA007_Epitope_Rep5 1070.46036385766 1070.4592699358602 24.989 2 -1.6491327569658707 0.42471602169899997 1.0 ['BRINP1|p.E573V|1|0.23|ENSG00000078725|chr9:119167652-119167652|T/A|missense_variant'] 43477 6125 IHVFPWDQEYF True H1975_Epitope_Rep1 1479.68230120659 1479.6812099358601 28.63 2 -1.649160935893737 0.42471602169899997 1.0 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 105878 4805 SVLAELRR True NCI_RA007_Epitope_Rep4 942.5610638751 942.55996993586 24.918 2 -1.6491854749122894 0.42471602169899997 1.0 ['ENSG00000198853|ENST00000361226|RUSC2'] 31003 10822 GATSLYRW True PC9_epitope_Rep5 952.4766655448 952.47556993586 46.616 2 -1.6492071007399338 0.42471602169899997 1.0 ['ENST00000520124.5_1_8:22005675-22011752:-|nuORF', 'nc|ENSG00000168481|Q8N145-2|LGI3', 'ENSG00000168481|ENST00000306317|LGI3'] 121009 18236 VGFAFTKEDL True H1975_Epitope_Rep2 1125.57062549929 1125.56896490379 75.604 3 -1.6492289299514546 0.42471602169899997 1.0 ['ENST00000459899.1_1_14:35857513-35858113:-|nuORF'] 10364 18115 CITPKRRLTR True NCI_RA007_Epitope_Rep5 1242.7342942931398 1242.73264490379 76.484 3 -1.649250804320786 0.42471602169899997 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 37717 16987 HARRRPQRRWE True PC9_epitope_Rep5 1546.8453928368197 1546.8442899358602 70.358 2 -1.6493286439189903 0.4247177268660604 1.0 ['ENST00000261692.6_1_12:123751765-123756364:-|nuORF'] 915 8944 ADRDRLQLIKE True H1975_Epitope_Rep3 1355.7521121019101 1355.75047490379 39.4 3 -1.6493936578526132 0.4247177268660604 1.0 ['WWC3|p.Q980Rfs*4|1|0.3|ENSG00000047644|chrX:10138788-10138788|G/-|frameshift_variant', 'WWC3|p.Q1028Rfs*19|1|0.56|ENSG00000047644|chrX:10138932-10138932|G/-|frameshift_variant', 'ENSG00000047644|ENST00000380861|WWC3', 'nc|ENSG00000047644|Q9ULE0-2|WWC3'] 20098 8925 ENILTNYENQ True H1975_Epitope_Rep2 1236.5622456435601 1236.5611499358602 39.292 2 -1.6494398713547809 0.4247242418065276 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'DST|p.S2362C|2|0.2|ENSG00000151914|chr6:56606910-56606910|G/C|missense_variant'] 70553 5645 LYVSTGVV True PC9_epitope_Rep1 836.4643695256 836.46326993586 26.537 2 -1.649526075924488 0.42473075659943604 1.0 ['ENSG00000173302|ENST00000309926|GPR148'] 120984 7088 VGESRSIAV True PC9_epitope_Rep6 916.4977949121999 916.49668993586 36.301 2 -1.6496575664782154 0.4247324613555291 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 31208 14599 GDLDERRLLCH True NCI_RA007_Epitope_Rep1 1325.65101816165 1325.6499299358602 60.836 2 -1.6497010973273993 0.4247324613555291 1.0 ['ENSG00000205089|ENST00000378731|CCNI2', 'nc|ENSG00000205089|Q6ZMN8-3|CCNI2', 'nc|ENSG00000205089|Q6ZMN8-2|CCNI2'] 65067 19543 LSDLGKRE True PC9_epitope_Rep6 916.4977949122 916.49668993586 87.835 2 -1.6497369438389784 0.4247406803460615 1.0 ['nc|ENSG00000186654|P85299-5|PRR5', 'nc|ENSG00000186654|P85299-3|PRR5', 'ENSG00000186654|ENST00000336985|PRR5', 'ENST00000459857.5_1_22:45072965-45122509:+|nuORF', 'ENST00000492289.5_1_22:45073049-45126704:+|nuORF'] 8765 7596 AVEEYVYDFRD True PC9_epitope_Rep2 1404.6197605196796 1404.61866993586 34.588 2 -1.6498249103993432 0.4247406803460615 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 98998 22776 SKKTKKRPP True H1975_Epitope_Rep2 1068.6767623336798 1068.67566993586 94.046 2 -1.6498695332629936 0.4247406803460615 1.0 ['nc|ENSG00000020219|A6NM43|CCT8L1P'] 111112 10272 TLELEMSHV True PC9_epitope_Rep4 1057.51139637101 1057.51028993586 47.196 2 -1.6499517805209643 0.4247585183843096 1.0 ['ENST00000411573.6_1_17:45976849-45977116:-|nuORF'] 133185 20610 WDVIQKHC True H1975_Epitope_Rep2 1027.4909357099498 1027.4898299358601 85.37 2 -1.6499745804897272 0.42476022239585104 1.0 ['ENSG00000158486|ENST00000698260|DNAH3', 'nc|ENSG00000158486|Q8TD57|DNAH3', 'nc|ENSG00000158486|Q8TD57-3|DNAH3', 'nc|ENSG00000158486|Q8TD57-2|DNAH3'] 32432 11579 GGGTCHRC True H1975_Epitope_Rep2 789.3010267652899 789.3004749679301 49.603 1 -1.649984463194251 0.42476022239585104 1.0 ['nc|ENSG00000106123|O15197|EPHB6', 'ENSG00000106123|ENST00000652003|EPHB6', 'nc|ENSG00000106123|O15197-3|EPHB6', 'nc|ENSG00000106123|O15197-2|EPHB6'] 38205 24596 HETGHVLG True PC9_epitope_Rep5 848.41406528824 848.41296993586 99.724 2 -1.650145710795337 0.42477805960684845 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 31853 17967 GEPSHPPG True NCI_RA007_Epitope_Rep5 776.3453170220799 776.34420993586 75.897 2 -1.6502041524276247 0.4247845730526649 1.0 ['nc|ENSG00000106078|O75128-3|COBL', 'ENSG00000106078|ENST00000265136|COBL', 'nc|ENSG00000106078|O75128-7|COBL', 'nc|ENSG00000106078|O75128-2|COBL', 'nc|ENSG00000106078|O75128-6|COBL', 'ENST00000462395.1_1_7:51085250-51098638:-|nuORF'] 4517 23861 AKPGGFGMG True NCI_RA007_Epitope_Rep5 820.3901590395199 820.38906993586 99.149 2 -1.6502789614597475 0.42479108635097496 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 128875 20054 VSSYPMHPLL True PC9_epitope_Rep2 1142.57941636118 1142.57830993586 82.543 2 -1.650413208996067 0.42479278952851124 1.0 ['ENSG00000145103|ENST00000344209|ILDR1', 'nc|ENSG00000145103|Q86SU0-4|ILDR1', 'nc|ENSG00000145103|Q86SU0-3|ILDR1', 'ENST00000460554.1_1_3:121712781-121740924:-|nuORF', 'nc|ENSG00000145103|Q86SU0-5|ILDR1'] 122347 20499 VGSAQIRQV True PC9_epitope_Rep4 956.5403284305199 956.53922993586 86.999 2 -1.6504312112920276 0.42479278952851124 1.0 ['nc|ENSG00000166473|Q7Z442-2|PKD1L2', 'nc|ENSG00000166473|Q7Z442|PKD1L2', 'ENST00000533478.5_1_16:81157348-81174942:-|nuORF'] 108638 11349 TEKLSKQGRP True PC9_epitope_Rep3 1142.6407707477797 1142.6396699358602 48.658 2 -1.6504916006131156 0.42479930251254006 1.0 ['ENSG00000184995|ENST00000448696|IFNE'] 107984 6527 TCPGTDDL True NCI_RA007_Epitope_Rep2 820.3272839994399 820.3267349679301 30.0 1 -1.6506345206967792 0.4248092208056883 1.0 ['ENST00000378536.4_1_1:2239670-2239811:+|nuORF'] 104406 21869 SSHRGGGG True PC9_epitope_Rep5 713.3204992565699 713.31995496793 89.156 1 -1.6506814100885034 0.4248092208056883 1.0 ['PDE10A|p.V531Sfs*3|1|0.53|ENSG00000112541|chr6:165392711-165392711|C/-|frameshift_variant', 'PDE10A|p.L582Wfs*33|1|0.24|ENSG00000112541|chr6:165388366-165388366|G/-|frameshift_variant', 'ENSG00000112541|ENST00000539869|PDE10A'] 101330 13384 SLYPSRPSV True PC9_epitope_Rep3 1004.5290950404799 1004.52798993586 56.512 2 -1.6506868086119022 0.4248092208056883 1.0 ['DLG5|p.P1167S|1|0.05|ENSG00000151208|chr10:77819922-77819922|G/A|missense_variant'] 85456 24966 QLGKWAILAIL True PC9_epitope_Rep5 1224.7594293284799 1224.75832993586 101.21 2 -1.6507881154083879 0.4248092208056883 1.0 ['nc|ENSG00000134755|Q02487-2|DSC2', 'ENSG00000134755|ENST00000280904|DSC2'] 115111 7675 TTVWRTQP True H1975_Epitope_Rep3 987.5137793295098 987.51268993586 34.505 2 -1.65082303985394 0.4248092208056883 1.0 ['MORC1|p.A684T|1|0.29|ENSG00000114487|chr3:109004852-109004852|C/T|missense_variant'] 109425 26107 TGRGGPPP True H1975_Epitope_Rep1 737.3820368839699 737.3814849679301 108.4 1 -1.650857006228086 0.4248157331612377 1.0 ['ENST00000581080.1_1_17:38497513-38497723:-|nuORF'] 101192 23210 SLVVAFICKLH True PC9_epitope_Rep3 1228.7002002002 1228.6991099358602 94.552 2 -1.6508815062915299 0.42481743560713275 1.0 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant'] 30382 11537 GAESHASK True H1975_Epitope_Rep3 785.36678074265 785.36623496793 49.502 1 -1.6508903675747153 0.42481743560713275 1.0 ['nc|ENSG00000162236|Q13190-2|STX5', 'ENSG00000162236|ENST00000294179|STX5', 'nc|ENSG00000162236|Q13190-3|STX5', 'nc|ENSG00000162236|Q13190-4|STX5'] 96036 7325 SEALRSVLAQ True H1975_Epitope_Rep3 1072.58767254576 1072.58656993586 33.15 2 -1.6509915643942819 0.4248304595423823 1.0 ['ENSG00000104808|ENST00000221403|DHDH'] 45690 8115 ISLESLAV True NCI_RA007_Epitope_Rep3 830.4749342092999 830.47382993586 39.025 2 -1.6511103866964882 0.4248304595423823 1.0 ['nc|ENSG00000104755|Q99965-2|ADAM2', 'ENSG00000104755|ENST00000265708|ADAM2'] 59395 17012 LGLLNTKQL True PC9_epitope_Rep4 998.6124307416201 998.61132993586 73.429 2 -1.6512983333318088 0.4248709356036591 1.0 ['ENSG00000160753|ENST00000368352|RUSC1', 'nc|ENSG00000160753|Q9BVN2-4|RUSC1', 'nc|ENSG00000160753|Q9BVN2-2|RUSC1', 'ENST00000462780.5_1_1:155294998-155295718:+|nuORF', 'nc|ENSG00000160753|Q9BVN2-3|RUSC1'] 116121 10301 TVSRVSVI True PC9_epitope_Rep3 859.51271670035 859.51160993586 44.57 2 -1.6514248493963477 0.4249000894383498 1.0 ['ENST00000583556.1_1_18:18550290-18550455:-|nuORF'] 10525 5744 CPKLQLWEWRN True PC9_epitope_Rep5 1471.7394392432298 1471.73779490379 27.087 3 -1.6515861172476327 0.42494226327944573 1.0 ['ENST00000607957.1_1_7:123389592-123389883:+|nuORF'] 35264 7482 GSLQPLPWLC True NCI_RA007_Epitope_Rep1 1112.5688516774799 1112.56774993586 33.095 2 -1.6516775502701522 0.42494226327944573 1.0 ['ENST00000486124.5_1_6:31905151-31913001:+|nuORF'] 63442 12342 LPGTPLQERMG True H1975_Epitope_Rep3 1197.6175927750498 1197.61648993586 52.658 2 -1.6516795422209953 0.42494226327944573 1.0 ['nc|ENSG00000117425|Q9Y6C5-2|PTCH2', 'ENSG00000117425|ENST00000372192|PTCH2'] 80646 18039 PLPPLTAKS True PC9_epitope_Rep5 922.5487678559 922.54766993586 74.402 2 -1.6517404658176251 0.4249487733915977 1.0 ['ENSG00000174106|ENST00000308330|LEMD3', 'LEMD3-MSRB3|2|fusion', 'LEMD3-MSRB3|1|fusion'] 53334 23639 KTPRELKKDPK True PC9_epitope_Rep1 1338.7983340183398 1338.79722993586 95.717 2 -1.6518285874780874 0.42495698243071905 1.0 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 134052 9248 WQIKDLNLF True NCI_RA007_Epitope_Rep4 1175.6338944621898 1175.63224490379 42.425 3 -1.651830002442159 0.42495698243071905 1.0 ['ENSG00000257138|ENST00000547270|TAS2R38'] 4505 27024 AKKRVIVKKLP True PC9_epitope_Rep2 1278.8863611770998 1278.8847149037902 111.3 3 -1.6519273937195147 0.42495698243071905 1.0 ['ENSG00000064270|ENST00000262429|ATP2C2', 'nc|ENSG00000064270|O75185-2|ATP2C2', 'nc|ENSG00000064270|O75185-3|ATP2C2'] 68941 25381 LVFRKPRGLFI True PC9_epitope_Rep4 1344.8394109846797 1344.83776490379 106.52 3 -1.652143235665316 0.4250200935055526 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 43694 6236 IINVGSGV True H1975_Epitope_Rep3 757.4334037504899 757.43230993586 28.999 2 -1.6522265495745887 0.4250557511404929 1.0 ['nc|ENSG00000083454|Q93086|P2RX5'] 32813 8156 GIFQLWNCPLN True NCI_RA007_Epitope_Rep5 1303.6383282196298 1303.6372299358602 38.054 2 -1.6522866740648892 0.4250557511404929 1.0 ['ENSG00000145975|ENST00000274673|FAM217A'] 119020 13695 VEFWRYSKN True H1975_Epitope_Rep1 1227.6036569630699 1227.60254993586 57.814 2 -1.6524190025669114 0.4250673488329975 1.0 ['ENST00000378962.3_1_X:30578440-30594892:-|nuORF'] 10283 21690 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 94.042 2 -1.652456842711949 0.4250673488329975 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 133925 4069 WNRPCGAGPD True PC9_epitope_Rep3 1071.4556128303898 1071.4545099358602 20.77 2 -1.6525091937726504 0.4250673488329975 1.0 ['ENST00000341863.10_1_10:82249024-82267129:+|nuORF', 'ENST00000372164.7_1_10:82249024-82269226:+|nuORF', 'ENST00000372157.6_1_10:82264487-82269226:+|nuORF', 'ENST00000429989.7_1_10:82249024-82269226:+|nuORF', 'ENST00000469149.1_1_10:82249024-82269286:+|nuORF'] 48344 15698 KDWHVSGSIQK True H1975_Epitope_Rep1 1283.6622344683499 1283.6611299358601 65.675 2 -1.652518582132606 0.4250673488329975 1.0 ['ENSG00000055732|ENST00000370589|MCOLN3', 'nc|ENSG00000055732|Q8TDD5-2|MCOLN3', 'ENST00000475312.1_1_1:85491576-85494918:-|nuORF'] 61398 13665 LLENYQPWLDL True H1975_Epitope_Rep3 1402.7132669817 1402.7121699358602 57.853 2 -1.6525374487580038 0.4250673488329975 1.0 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14', 'ENST00000508980.5_1_6:86270935-86284080:-|nuORF'] 23121 10937 EVLYFPDRWWH True H1975_Epitope_Rep3 1546.7357337617798 1546.73462993586 47.156 2 -1.6525720453047195 0.4250673488329975 1.0 ['nc|ENSG00000161999|Q96S16-2|JMJD8', 'ENSG00000161999|ENST00000609261|JMJD8', 'ENST00000569441.5_1_16:732796-733478:-|nuORF'] 89960 576 RGAGSKRKRR True NCI_RA007_Epitope_Rep1 1170.71700443622 1170.71536490379 3.0608 3 -1.6525818800612162 0.4250673488329975 1.0 ['nc|ENSG00000064932|Q9Y2G9-3|SBNO2', 'ENSG00000064932|ENST00000361757|SBNO2'] 38317 10277 HFSEEVLLR True H1975_Epitope_Rep1 1128.5927579262 1128.5916699358602 44.474 2 -1.6526137289353287 0.4250707413695529 1.0 ['ENSG00000110628|ENST00000649076|SLC22A18'] 16532 5814 EEQAVQLYY True PC9_epitope_Rep4 1141.52915461013 1141.52749490379 29.223 3 -1.6527491282597973 0.4250707413695529 1.0 ['ENSG00000159433|ENST00000290607|STARD9'] 91273 19282 RLWPTLSKS True PC9_epitope_Rep2 1086.61857875122 1086.61807496793 79.543 1 -1.652750618131728 0.4250707413695529 1.0 ['ENSG00000133812|ENST00000256190|SBF2', 'ENST00000533770.5_1_11:9861043-10215451:-|nuORF', 'nc|ENSG00000133812|Q86WG5-3|SBF2'] 28236 18339 FRSGFRKND True H1975_Epitope_Rep2 1125.56794016069 1125.56629490379 76.051 3 -1.6527527461171798 0.4250707413695529 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO'] 126604 17126 VPPPPPLPCA True NCI_RA007_Epitope_Rep4 986.52592423634 986.52482993586 74.192 2 -1.6530233548246749 0.4251451596473158 1.0 ['ENST00000468880.1_1_17:39680334-39681232:-|nuORF', 'ENST00000471565.2_1_17:39680334-39680852:-|nuORF'] 135736 26437 YEKKLAKMC True PC9_epitope_Rep3 1112.5722228057598 1112.5711299358602 108.04 2 -1.653087986565151 0.4251485484692434 1.0 ['ENST00000462265.5_1_1:241755332-241761290:-|nuORF', 'ENST00000463155.5_1_1:241757732-241840646:-|nuORF', 'nc|ENSG00000203668|Q9H1Y3-2|OPN3', 'ENSG00000054277|ENST00000366554|OPN3'] 95954 4212 SDYSFSVIAMS True PC9_epitope_Rep6 1205.52744035797 1205.52634993586 23.166 2 -1.6531183933052278 0.4251485484692434 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 14774 6862 DWKELYRKRHI True NCI_RA007_Epitope_Rep1 1542.84193016582 1542.84028490379 30.697 3 -1.653223942130518 0.4251485484692434 1.0 ['nc|ENSG00000100225|Q9Y3I1-3|FBXO7', 'nc|ENSG00000100225|Q9Y3I1-2|FBXO7', 'ENSG00000100225|ENST00000266087|FBXO7', 'ENST00000492535.1_1_22:32889009-32894514:+|nuORF'] 44260 19289 ILTTSLRDL True PC9_epitope_Rep4 1030.60225998074 1030.60116993586 82.301 2 -1.653228612628921 0.4251485484692434 1.0 ['nc|ENSG00000176601|Q56UN5-3|MAP3K19', 'ENSG00000176601|ENST00000392915|MAP3K19'] 122583 8379 VGTGFGSK True PC9_epitope_Rep1 751.38645355807 751.3859049679301 37.065 1 -1.653283313179141 0.4251550545520395 1.0 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF'] 118878 15796 VEENLTARI True PC9_epitope_Rep2 1043.56112344475 1043.56002993586 66.022 2 -1.6533961614788792 0.4251680662758324 1.0 ['ENST00000531371.5_1_11:104776194-104789795:-|nuORF'] 122641 19344 VGTNGGLK True PC9_epitope_Rep6 744.41300265908 744.4124549679301 87.056 1 -1.6534359776024494 0.4251680662758324 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 131552 13981 VVVLLSAE True NCI_RA007_Epitope_Rep4 828.49566965388 828.49456993586 61.05 2 -1.6536805847779676 0.4252424767143132 1.0 ['PIK3AP1-TM9SF3|1|fusion', 'ENSG00000155629|ENST00000339364|PIK3AP1'] 51901 21230 KKRRHLTPT True PC9_epitope_Rep6 1135.69380938015 1135.6927099358602 94.51 2 -1.6537922036255912 0.4252602987777275 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 63691 18580 LPPWLFSRRRR True H1975_Epitope_Rep3 1482.86841969718 1482.8673299358602 77.917 2 -1.653871337877863 0.4252781204377497 1.0 ['nc|ENSG00000117281|O95971-4|CD160', 'nc|ENSG00000117281|O95971-3|CD160'] 63435 6031 LPGSPKQN True NCI_RA007_Epitope_Rep3 839.4501164437901 839.4495649679301 30.703 1 -1.6538844810402613 0.4252846246123899 1.0 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113931616-113943025:+|nuORF'] 98745 4059 SIRWACLVVDE True H1975_Epitope_Rep3 1289.64380752289 1289.64217490379 20.74 3 -1.6539301915982698 0.4252863156941741 1.0 ['nc|ENSG00000170004|Q12873-3|CHD3', 'nc|ENSG00000170004|Q12873-2|CHD3', 'ENSG00000170004|ENST00000330494|CHD3'] 20507 18809 EPVIKLENR True NCI_RA007_Epitope_Rep1 1096.62405805448 1096.62347496793 77.307 1 -1.6539825710962843 0.4252863156941741 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 25158 5154 FDRFSRND True PC9_epitope_Rep3 1055.47845644995 1055.47734993586 24.909 2 -1.6540307546656592 0.42528800669940925 1.0 ['nc|ENSG00000129990|O00445-2|SYT5', 'ENSG00000129990|ENST00000354308|SYT5'] 117363 16365 VAASVTAKS True H1975_Epitope_Rep1 832.46543215476 832.4648849679301 68.307 1 -1.6541014293951786 0.42528800669940925 1.0 ['ENSG00000166716|ENST00000560079|ZNF592'] 37527 8831 GYLLPFPGPG True PC9_epitope_Rep4 1016.5331177917599 1016.53202993586 41.501 2 -1.6541328709790615 0.42529789184234645 1.0 ['ENST00000264703.3_1_2:27715053-27715119:-|nuORF'] 107489 7636 TAAHFSHR True H1975_Epitope_Rep1 925.4518477792901 925.45129496793 34.357 1 -1.6541911676113445 0.42529789184234645 1.0 ['nc|ENSG00000173928|Q6NVH7|SWSAP1', 'ENSG00000173928|ENST00000674460|SWSAP1'] 106417 22221 SVTKGRRL True PC9_epitope_Rep3 915.5613982282698 915.56030993586 90.759 2 -1.6542169330809529 0.42529789184234645 1.0 ['ENST00000286353.8_2_3:141012052-141012157:+|nuORF'] 14287 8875 DTAGRSESSDP True H1975_Epitope_Rep1 1120.46325987828 1120.4621699358602 39.051 2 -1.6542645672589755 0.42529789184234645 1.0 ['nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000104972|Q8NHL6-5|LILRB1'] 78948 17221 PFGHGLRPV True PC9_epitope_Rep1 978.5399345077 978.53882993586 71.059 2 -1.6542833355585937 0.42529789184234645 1.0 ['ENSG00000184702|ENST00000455784|SEPTIN5', 'nc|ENSG00000284874|Q99719-2|SEPTIN5'] 122021 5745 VGQKMEFYS True PC9_epitope_Rep3 1087.50083168731 1087.4997299358602 27.17 2 -1.6544082758550587 0.425304395057258 1.0 ['ENST00000379933.7_1_6:7176934-7182129:+|nuORF'] 86534 25845 QRAPKPLPRV True H1975_Epitope_Rep2 1160.71421047156 1160.71310993586 106.12 2 -1.6545192474293888 0.4253094661567358 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 92731 24577 RRKKKRKKLCQ True H1975_Epitope_Rep3 1470.94053909162 1470.93889490379 102.27 3 -1.6545677100609337 0.4253094661567358 1.0 ['ENSG00000170396|ENST00000302277|ZNF804A', 'ZNF804A|p.P1071Qfs*25|1|0.28|ENSG00000170396|chr2:184938607-184938607|C/-|frameshift_variant'] 59212 8753 LGGAREVP True NCI_RA007_Epitope_Rep2 797.4395517600899 797.43900496793 38.693 1 -1.6545819211181123 0.4253094661567358 1.0 ['ENSG00000136274|ENST00000490531|NACAD'] 122918 18673 VGVSVLLA True NCI_RA007_Epitope_Rep2 756.4745402864799 756.47399496793 77.433 1 -1.6546156228820412 0.4253094661567358 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'TENM3|p.A314G|1|0.48|ENSG00000218336|chr4:182628842-182628842|C/G|missense_variant'] 735 9968 AAVPKAEN True NCI_RA007_Epitope_Rep4 798.42356734278 798.42246993586 45.186 2 -1.6546243630597377 0.4253094661567358 1.0 ['ENSG00000205978|ENST00000382554|NYNRIN', 'NYNRIN|p.R1248Pfs*56|1|0.39|ENSG00000205978|chr14:24415486-24415487|-/G|frameshift_variant'] 120899 6649 VGDYWRNF True PC9_epitope_Rep5 1055.4824792012298 1055.48138993586 30.548 2 -1.6546491309029985 0.4253094661567358 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant'] 73658 15036 NGLKSLSA True NCI_RA007_Epitope_Rep3 788.43921740692 788.43812993586 66.604 2 -1.6548445351497798 0.42531596872560223 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 48723 11794 KENLGWQKL True NCI_RA007_Epitope_Rep4 1114.61349337078 1114.6123899358602 52.34 2 -1.65489114676509 0.4253224711473184 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 26596 8294 FKEWFWLERFW True NCI_RA007_Epitope_Rep1 1672.8190694629197 1672.8179699358602 36.263 2 -1.6549381053281964 0.4253289734218893 1.0 ['ENSG00000154227|ENST00000679737|CERS3'] 102399 5979 SPVTSAEKKK True H1975_Epitope_Rep3 1073.6080736371698 1073.6069699358602 28.009 2 -1.6551079214631692 0.42535810459143264 1.0 ['ENST00000502360.5_1_4:130017289-130023978:+|nuORF'] 102444 8020 SPWTRFQWRRR True NCI_RA007_Epitope_Rep4 1574.83309681762 1574.83144490379 37.614 3 -1.655203538980401 0.42536460631569417 1.0 ['nc|ENSG00000159714|Q8WTX9|ZDHHC1'] 7574 14476 ASGGKDKC True PC9_epitope_Rep2 764.34868815036 764.34758993586 60.952 2 -1.655241662339924 0.4253824221578566 1.0 ['ENSG00000073536|ENST00000442241|NLE1', 'nc|ENSG00000073536|Q9NVX2-2|NLE1'] 121608 17744 VGLCPKPL True PC9_epitope_Rep2 825.4782457679299 825.47714993586 73.535 2 -1.655300916939007 0.42540673862376394 1.0 ['nc|ENSG00000184481|P98177-2|FOXO4', 'ENSG00000184481|ENST00000374259|FOXO4'] 125839 14362 VNPINANN True NCI_RA007_Epitope_Rep2 854.42462997194 854.4240849679301 60.533 1 -1.655307081223917 0.42540673862376394 1.0 ['nc|ENSG00000133110|Q15063-7|POSTN', 'nc|ENSG00000133110|Q15063-6|POSTN', 'nc|ENSG00000133110|Q15063-4|POSTN', 'nc|ENSG00000133110|Q15063-10|POSTN', 'nc|ENSG00000133110|Q15063-2|POSTN', 'nc|ENSG00000133110|Q15063-3|POSTN', 'nc|ENSG00000133110|Q15063-9|POSTN', 'nc|ENSG00000133110|Q15063-8|POSTN', 'nc|ENSG00000133110|Q15063-5|POSTN', 'POSTN|p.A819Sfs*9|2|0.58|ENSG00000133110|chr13:37564537-37564538|-/T|frameshift_variant', 'ENSG00000133110|ENST00000379747|POSTN'] 75192 21569 NNRLELLPI True H1975_Epitope_Rep2 1080.6291434349198 1080.6280499358602 89.238 2 -1.6554375232382021 0.425408426483233 1.0 ['ENST00000492787.6_1_6:139234041-139235943:-|nuORF'] 27376 23136 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 96.246 2 -1.6555126060320906 0.425408426483233 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 118425 16510 VDPEADRFFSM True H1975_Epitope_Rep3 1312.57578753272 1312.57468993586 69.003 2 -1.6556216682982892 0.42543274126032354 1.0 ['nc|ENSG00000172367|Q86UT5-3|NHERF4', 'ENSG00000172367|ENST00000355547|NHERF4', 'nc|ENSG00000172367|Q86UT5|NHERF4'] 100297 8544 SLLVGGAG True H1975_Epitope_Rep3 672.3806399016399 672.3800949679301 37.852 1 -1.6556286271006357 0.42543274126032354 1.0 ['ENST00000262735.9_1_22:46639202-46639412:+|nuORF'] 133582 22265 WIFQASKHH True NCI_RA007_Epitope_Rep5 1152.58286194884 1152.5817699358602 92.79 2 -1.6557165921890533 0.42544574169608107 1.0 ['nc|ENSG00000183378|Q7RTZ1|OVCH2', 'ENSG00000183378|ENST00000533663|OVCH2'] 59254 10847 LGGPNPGSRGL True PC9_epitope_Rep6 1023.5461420869499 1023.54504993586 52.583 2 -1.655742624417248 0.42544574169608107 1.0 ['ENST00000464108.5_1_9:130689570-130690941:-|nuORF', 'ENST00000388747.8_1_9:130688255-130692027:-|nuORF', 'ENST00000498783.5_1_9:130688255-130691028:-|nuORF'] 137628 15026 YLVRVDEKHRR True NCI_RA007_Epitope_Rep1 1469.82152907441 1469.8204299358601 62.514 2 -1.6558403687291223 0.425497494145464 1.0 ['ENSG00000112972|ENST00000325110|HMGCS1'] 122270 21884 VGRRRTSR True PC9_epitope_Rep4 986.5845932843399 986.58404496793 92.387 1 -1.6558866787700626 0.4255039934837206 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 80985 21028 PNLEDIYTSLC True H1975_Epitope_Rep2 1266.5802042068199 1266.57856490379 87.037 3 -1.6559192526967526 0.4255104926749251 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 51950 24822 KKVKMATK True PC9_epitope_Rep5 932.5841078187999 932.58355496793 100.64 1 -1.6561071389841684 0.4255169917190823 1.0 ['nc|nan|Q6PH81-2|C16orf87', 'ENSG00000155330|ENST00000285697|C16orf87'] 11787 7360 DHIPLASL True NCI_RA007_Epitope_Rep4 864.4705175352001 864.46942993586 34.951 2 -1.6562902016194938 0.425552614312541 1.0 ['PITPNM2|p.A513S|1|0.81|ENSG00000090975|chr12:122996846-122996846|C/A|missense_variant'] 73656 15887 NGLKSLSA True NCI_RA007_Epitope_Rep1 788.43921740692 788.43812993586 65.896 2 -1.6562942918486294 0.425552614312541 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 111997 11108 TLSPTWNQ True PC9_epitope_Rep1 945.45559574705 945.45448993586 47.612 2 -1.6563335356777993 0.4255656108597285 1.0 ['ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.L1277Afs*4|1|0.37|ENSG00000214814|chr8:124069468-124069469|TC/-|frameshift_variant'] 25635 7499 FEVTLGGV True NCI_RA007_Epitope_Rep1 820.4330693973199 820.43196993586 33.16 2 -1.656356446952665 0.4255656108597285 1.0 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF'] 137756 13567 YNLYIVENPHY True PC9_epitope_Rep5 1423.6772158261501 1423.67610993586 57.209 2 -1.6564701929465502 0.4255899187801181 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 14688 9334 DVNVYLGLTS True NCI_RA007_Epitope_Rep2 1079.5498900547097 1079.5487899358602 40.915 2 -1.6564877160965297 0.4255899187801181 1.0 ['nc|ENSG00000121101|Q8IWB6|TEX14', 'nc|ENSG00000121101|Q8IWB6-2|TEX14', 'ENSG00000121101|ENST00000349033|TEX14', 'TEX14|p.V574Ffs*10|1|0.41|ENSG00000121101|chr17:58599643-58599643|C/-|frameshift_variant'] 30778 3064 GAPGPAGAHGN True NCI_RA007_Epitope_Rep1 904.4151279174001 904.41402993586 15.799 2 -1.6566500748958874 0.42564166374444307 1.0 ['COL1A1|p.R322H|1|0.46|ENSG00000108821|chr17:50196192-50196192|C/T|missense_variant'] 90089 8948 RGQPACGL True H1975_Epitope_Rep1 800.39630704912 800.39520993586 39.322 2 -1.6567014419788995 0.4256659691193937 1.0 ['ENST00000380094.9_1_10:5931461-5931704:-|nuORF'] 128800 18952 VSRKGRTP True H1975_Epitope_Rep2 899.5300980999899 899.52900993586 78.668 2 -1.6567343516375967 0.4256659691193937 1.0 ['ENST00000496823.1_1_3:187455030-187463237:-|nuORF'] 117927 13380 VAQQRYWEWTP True PC9_epitope_Rep3 1462.6993482530597 1462.69824993586 56.498 2 -1.6567554105101834 0.4256837771192001 1.0 ['ENST00000314117.8_1_4:37650968-37687967:-|nuORF'] 68309 5603 LTRRVSAGSPP True PC9_epitope_Rep6 1139.6411051009497 1139.63944490379 29.614 3 -1.6569148100582183 0.42568713946386155 1.0 ['ENST00000536017.1_1_11:64053594-64053642:+|nuORF'] 6474 19182 APTEKNKIKRP True H1975_Epitope_Rep2 1280.7564692063597 1280.75536993586 79.618 2 -1.656936233041281 0.42568713946386155 1.0 ['ENSG00000163781|ENST00000260810|TOPBP1'] 53339 24131 KTQKKKKKKA True PC9_epitope_Rep4 1214.8186755401 1214.81756993586 101.31 2 -1.6570207903526077 0.42568713946386155 1.0 ['nc|ENSG00000170515|Q9UQ80-2|PA2G4', 'ENSG00000170515|ENST00000303305|PA2G4'] 60069 23325 LHSLAHGP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 96.186 2 -1.657034703437936 0.42568713946386155 1.0 ['nc|ENSG00000175600|Q9HAC7-2|SUGCT', 'nc|ENSG00000175600|Q9HAC7-3|SUGCT', 'CDK13-C7orf10|2|fusion', 'CDK13-C7orf10|6|fusion', 'CDK13-C7orf10|5|fusion'] 120343 13711 VFPNLRVA True PC9_epitope_Rep2 914.5337864980999 914.53268993586 58.029 2 -1.657108614484709 0.4256953162996392 1.0 ['ENST00000301732.9_1_16:2379695-2379815:-|nuORF'] 118257 345 VCKRWRQEW True NCI_RA007_Epitope_Rep5 1289.64514493557 1289.64349490379 1.993 3 -1.6571198733900407 0.4256953162996392 1.0 ['ENST00000443615.1_1_1:21112682-21113015:-|nuORF'] 79701 24731 PHPAAIAL True NCI_RA007_Epitope_Rep1 788.45447354824 788.4539249679301 102.4 1 -1.657156362600065 0.4256953162996392 1.0 ['ENST00000552168.1_1_12:53455573-53455786:+|nuORF'] 118677 13182 VEARRHQRLQ True PC9_epitope_Rep2 1291.7221493863099 1291.72104993586 55.978 2 -1.6573431645754713 0.42572297809294385 1.0 ['ENST00000606619.1_1_13:52767360-52768512:-|nuORF', 'ENST00000606974.5_1_13:52760947-52768512:-|nuORF', 'ENST00000423686.1_1_13:52763934-52768509:-|nuORF', 'ENST00000416599.5_1_13:52768206-52768563:-|nuORF'] 25626 8546 FEVPEMSP True H1975_Epitope_Rep2 934.4106197005799 934.4100749679301 37.827 1 -1.6573446300057757 0.42572297809294385 1.0 ['ENSG00000104953|ENST00000246112|TLE6', 'ENST00000497878.5_1_19:2988043-2994999:+|nuORF', 'nc|ENSG00000104953|Q9H808-2|TLE6'] 120898 6291 VGDYWRNF True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 29.231 2 -1.6573773021679647 0.42572297809294385 1.0 ['FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant'] 107841 5201 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 24.856 2 -1.657403173227162 0.42572297809294385 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 83307 21523 QAKRHIHQHRQ True NCI_RA007_Epitope_Rep2 1437.78139559793 1437.78028993586 89.092 2 -1.65745389870603 0.42572297809294385 1.0 ['nc|ENSG00000054523|O60333-3|KIF1B'] 55554 9282 LCCLADTSC True PC9_epitope_Rep5 927.3500106733101 927.3494649679301 40.652 1 -1.6574666926918666 0.42572297809294385 1.0 ['ENST00000483458.1_1_9:131831674-131832729:+|nuORF'] 30321 8402 GADKIQMTWTR True PC9_epitope_Rep5 1305.64995553249 1305.64831490379 37.261 3 -1.6575976274522015 0.4257246581694394 1.0 ['nc|ENSG00000124067|Q9UP95-3|SLC12A4', 'nc|ENSG00000124067|Q9UP95-5|SLC12A4', 'nc|ENSG00000124067|Q9UP95-2|SLC12A4', 'nc|ENSG00000124067|Q9UP95-6|SLC12A4', 'ENSG00000124067|ENST00000316341|SLC12A4', 'nc|ENSG00000124067|Q9UP95-7|SLC12A4'] 63799 14329 LPSPGCHLS True PC9_epitope_Rep3 909.43783750793 909.43674993586 60.202 2 -1.6576134273712826 0.4257246581694394 1.0 ['ENST00000547437.5_1_19:14693928-14693970:+|nuORF'] 79320 21936 PGKPGKRLV True H1975_Epitope_Rep2 950.6025347642599 950.60142993586 90.698 2 -1.6578636200642909 0.42576508108841693 1.0 ['ENST00000392754.7_2_10:126431146-126431500:-|nuORF'] 59747 13789 LGVTPPEELHT True H1975_Epitope_Rep3 1191.6135529404298 1191.61244993586 58.342 2 -1.657916298544645 0.42577325417020073 1.0 ['ENSG00000159459|ENST00000290650|UBR1'] 102146 23186 SPRLLHQPW True PC9_epitope_Rep6 1132.61416207712 1132.61306993586 102.28 2 -1.6579191716719384 0.42577325417020073 1.0 ['AMPH|p.P575Rfs*35|1|0.39|ENSG00000078053|chr7:38391902-38391902|G/-|frameshift_variant'] 39814 18366 HQERYCGQY True H1975_Epitope_Rep2 1182.48764123466 1182.48598490379 76.178 3 -1.6579371061599009 0.42577325417020073 1.0 ['ENST00000308020.5_1_11:460222-473945:+|nuORF'] 80793 12880 PLSSLSTHHP True PC9_epitope_Rep1 1074.54580773378 1074.54470993586 54.416 2 -1.6579551866198907 0.4257797480379074 1.0 ['RERE|p.V1452Ffs*8|1|0.47|ENSG00000142599|chr1:8356232-8356232|C/-|frameshift_variant', 'ENSG00000142599|ENST00000400908|RERE', 'nc|ENSG00000142599|Q9P2R6-2|RERE'] 48099 981 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 5.3318 3 -1.6580411140920226 0.4258105372671861 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 10256 10470 CGAGPHET True NCI_RA007_Epitope_Rep3 770.3017379579401 770.30064993586 48.247 2 -1.6580429713840268 0.4258105372671861 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.V466*|1|0.33|ENSG00000158258|chr3:140532374-140532374|G/-|frameshift_variant'] 69883 21064 LYAWAVEL True PC9_epitope_Rep2 963.5065686907499 963.5060249679301 86.479 1 -1.6580887483564908 0.4258105372671861 1.0 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000478561.5_1_3:49137386-49138086:-|nuORF'] 113134 10342 TQAPLALTPLP True H1975_Epitope_Rep3 1120.6492101731599 1120.64810993586 44.833 2 -1.658212758205091 0.425818926039417 1.0 ['ENST00000563592.5_1_15:73075590-73075839:+|nuORF'] 137818 26206 YPEYLSNFP True PC9_epitope_Rep5 1128.51277627 1128.51112490379 106.55 3 -1.6583052124955124 0.425818926039417 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 78587 11224 PDSAEMLPP True H1975_Epitope_Rep1 955.4320834211499 955.43153496793 48.145 1 -1.658336243750429 0.425818926039417 1.0 ['ENSG00000177380|ENST00000334186|PPFIA3', 'nc|ENSG00000177380|O75145-2|PPFIA3', 'ENST00000602905.1_1_19:49651881-49653392:+|nuORF'] 135054 8024 YAKLRKDDP True NCI_RA007_Epitope_Rep2 1104.5927579262 1104.5916699358602 35.842 2 -1.6584283750367481 0.425818926039417 1.0 ['ENSG00000248746|ENST00000513398|ACTN3', 'ENST00000513398.1_1_11:66314411-66328094:+|nuORF', 'ENST00000502692.5_1_11:66313918-66328094:+|nuORF'] 75244 27224 NPKQFMTM True PC9_epitope_Rep3 995.4568587003499 995.45576993586 112.03 2 -1.658436194659474 0.425818926039417 1.0 ['nc|ENSG00000167889|Q3V5L5-5|MGAT5B', 'ENSG00000167889|ENST00000569840|MGAT5B', 'nc|ENSG00000167889|Q3V5L5-2|MGAT5B'] 137346 23329 YLKEFRTEQ True PC9_epitope_Rep2 1212.6138872936 1212.61225490379 95.208 3 -1.6584703419802898 0.425818926039417 1.0 ['ENSG00000132478|ENST00000589666|UNK', 'ENST00000503648.1_1_16:1451355-1464692:-|nuORF', 'nc|ENSG00000059145|Q9H9P5|UNKL', 'nc|ENSG00000059145|Q9H9P5-5|UNKL', 'ENSG00000059145|ENST00000389221|UNKL', 'nc|ENSG00000059145|Q9H9P5-6|UNKL'] 119496 11450 VEQLAYYH True H1975_Epitope_Rep1 1021.48689587533 1021.48637496793 49.023 1 -1.65847220773598 0.425818926039417 1.0 ['nc|ENSG00000109572|P51790-2|CLCN3', 'nc|ENSG00000109572|P51790-4|CLCN3', 'nc|ENSG00000109572|P51790-5|CLCN3', 'ENSG00000109572|ENST00000513761|CLCN3'] 135119 16629 YAPEPGAA True H1975_Epitope_Rep1 774.3548190766198 774.3542749679301 69.343 1 -1.658484237734422 0.425818926039417 1.0 ['ENST00000290913.7_2_3:126679085-126679208:+|nuORF'] 118456 3315 VDQLWKLMNSG True PC9_epitope_Rep5 1289.6438075228898 1289.64217490379 17.806 3 -1.658619681639482 0.425818926039417 1.0 ['ENSG00000064313|ENST00000378164|TAF2'] 125132 24359 VLPPHLGT True NCI_RA007_Epitope_Rep2 832.4806882960801 832.4801349679301 102.31 1 -1.6586437716327835 0.425818926039417 1.0 ['ENST00000462139.1_1_1:247463643-247463787:-|nuORF'] 86996 14683 QRWWFWLTLFF True H1975_Epitope_Rep3 1628.8292402237996 1628.8281499358602 61.848 2 -1.6587041157441311 0.42582709572375116 1.0 ['XKR4|p.G146W|1|0.16|ENSG00000206579|chr8:55102924-55102924|G/T|missense_variant'] 86127 2757 QPRDLPDRCS True H1975_Epitope_Rep2 1185.5560551476499 1185.55441490379 14.633 3 -1.6587642577955684 0.42582709572375116 1.0 ['ENST00000412425.1_1_2:130736586-130737732:-|nuORF'] 54556 15600 LAARMGTKM True PC9_epitope_Rep5 977.5150422828099 977.51394993586 65.015 2 -1.6587820129486854 0.42582709572375116 1.0 ['ENSG00000149311|ENST00000675843|ATM', 'ENST00000524792.5_1_11:108158320-108236232:+|nuORF'] 121997 21393 VGQGGGGK True PC9_epitope_Rep5 658.3398377188199 658.3392849679301 87.35 1 -1.6588172916764858 0.42583358773447305 1.0 ['ENST00000589017.5_1_17:66507964-66511234:+|nuORF'] 134181 11597 WRLLLYRERRL True NCI_RA007_Epitope_Rep1 1572.9364992569997 1572.93484490379 49.08 3 -1.6588479740282225 0.42583526485386397 1.0 ['ENSG00000180998|ENST00000321662|GPR137C'] 90825 18603 RKTRHVNIL True NCI_RA007_Epitope_Rep5 1135.6938093801498 1135.6927099358602 78.371 2 -1.6588636259844487 0.42583526485386397 1.0 ['ENSG00000157764|ENST00000646891|BRAF', 'ENST00000497784.1_2_7:140434399-140508041:-|nuORF', 'ENST00000494557.1_1_3:12632295-12633310:-|nuORF', 'ENST00000460610.1_1_3:12632295-12641253:-|nuORF', 'ENST00000465826.5_1_3:12628841-12633220:-|nuORF', 'ENSG00000132155|ENST00000251849|RAF1', 'nc|ENSG00000132155|P04049-2|RAF1', 'ENSG00000078061|ENST00000377045|ARAF'] 57618 9686 LELQRLYSEHS True H1975_Epitope_Rep2 1373.6939285194499 1373.6928299358601 42.238 2 -1.6589354313438551 0.42584175655202045 1.0 ['ENST00000369151.7_1_10:120445489-120445597:-|nuORF'] 69760 24501 LWLLCRGG True PC9_epitope_Rep4 916.4952928143999 916.49418993586 102.73 2 -1.6590832370711166 0.42587086051533685 1.0 ['ENSG00000256043|ENST00000433477|CTSO'] 134983 12443 YAGEVQYDVR True PC9_epitope_Rep5 1198.56185172074 1198.56074993586 52.863 2 -1.6592285550969812 0.42588384266639534 1.0 ['ENSG00000145555|ENST00000513610|MYO10', 'MYO10|p.S1226Lfs*25|1|0.26|ENSG00000145555|chr5:16694496-16694497|-/C|frameshift_variant'] 86395 24573 QQLVESLHK True PC9_epitope_Rep2 1080.5927579262 1080.5916699358602 100.14 2 -1.6592994467492788 0.42588384266639534 1.0 ['nc|ENSG00000138750|Q7Z3B4-2|NUP54', 'nc|ENSG00000138750|Q7Z3B4-3|NUP54', 'ENSG00000138750|ENST00000264883|NUP54'] 125647 23631 VMLALPSV True NCI_RA007_Epitope_Rep4 828.47791141476 828.47680993586 102.5 2 -1.6594189344514243 0.42589682423036485 1.0 ['nc|ENSG00000115685|Q15435-2|PPP1R7', 'ENSG00000115685|ENST00000234038|PPP1R7'] 79394 17677 PGLRNKLQ True PC9_epitope_Rep4 924.5504991913999 924.54940993586 76.019 2 -1.6595057341998165 0.42589682423036485 1.0 ['nc|ENSG00000106976|Q05193-5|DNM1', 'nc|ENSG00000106976|Q05193-3|DNM1', 'nc|ENSG00000106976|Q05193-2|DNM1', 'ENSG00000106976|ENST00000372923|DNM1', 'ENST00000441149.6_1_9:130980552-131010310:+|nuORF'] 90460 21804 RISSIREFGFF True NCI_RA007_Epitope_Rep2 1357.7142700412098 1357.7131699358602 90.38 2 -1.659757838160939 0.42593723149278706 1.0 ['nc|ENSG00000163728|Q96N46-2|TTC14', 'ENSG00000163728|ENST00000296015|TTC14', 'TTC14|p.G321Dfs*7|1|0.27|ENSG00000163728|chr3:180606284-180606284|G/-|frameshift_variant', 'TTC14|p.G355Efs*3|1|0.24|ENSG00000163728|chr3:180606490-180606490|A/-|frameshift_variant', 'nc|ENSG00000163728|Q96N46-3|TTC14'] 52927 24642 KRKFAGLLKN True PC9_epitope_Rep4 1173.7346115629696 1173.73297490379 103.28 3 -1.659862253961788 0.4259518856832776 1.0 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant', 'BRCA2|p.L1390Ffs*13|1|0.17|ENSG00000139618|chr13:32338518-32338519|-/T|frameshift_variant'] 19355 12878 ELNHWRYIYPL True H1975_Epitope_Rep3 1502.76703389006 1502.7659299358602 54.76 2 -1.659963517667387 0.4259518856832776 1.0 ['ENST00000468057.5_1_1:205760663-205770562:-|nuORF', 'ENSG00000133065|ENST00000367137|SLC41A1'] 31255 8473 GDQRIQVAK True NCI_RA007_Epitope_Rep2 1013.5617921510899 1013.56068993586 37.602 2 -1.6599738464381244 0.4259518856832776 1.0 ['nc|ENSG00000058600|Q9NVU0-3|POLR3E', 'nc|ENSG00000058600|Q9NVU0-2|POLR3E', 'nc|ENSG00000058600|Q9NVU0-5|POLR3E', 'ENST00000564061.5_1_16:22308800-22337695:+|nuORF', 'nc|ENSG00000058600|Q9NVU0-4|POLR3E', 'ENSG00000058600|ENST00000299853|POLR3E'] 86920 3019 QRRWAGPCLW True NCI_RA007_Epitope_Rep1 1271.6345802518697 1271.63348993586 15.613 2 -1.6600711595451891 0.4259518856832776 1.0 ['ENST00000361470.3_1_X:75648135-75648333:+|nuORF'] 91713 20861 RPGTCKTS True NCI_RA007_Epitope_Rep5 848.41743641652 848.41632993586 87.237 2 -1.66016366015276 0.425958375255774 1.0 ['ENSG00000204209|ENST00000374542|DAXX', 'nc|ENSG00000204209|Q9UER7-3|DAXX'] 4520 22512 AKPGGFGMG True PC9_epitope_Rep6 820.3901590395199 820.38906993586 99.597 2 -1.6605161357244351 0.42597784309292336 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 117856 13914 VAPETRAVI True PC9_epitope_Rep4 954.5498304850598 954.54872993586 61.423 2 -1.660538496990977 0.42597784309292336 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 94170 19266 RWLEKEERFLK True PC9_epitope_Rep2 1532.8463468399198 1532.84524993586 79.481 2 -1.6605505415893993 0.42597784309292336 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 71170 4574 MFETFHLEFHY True NCI_RA007_Epitope_Rep1 1499.6543722065896 1499.6527349037901 21.887 3 -1.6606028033514206 0.42598600544860565 1.0 ['CUBN|p.R1579Gfs*21|2|0.21|ENSG00000107611|chr10:16954510-16954510|G/-|frameshift_variant', 'CUBN|p.E3207Rfs*14|1|0.2|ENSG00000107611|chr10:16851279-16851279|C/-|frameshift_variant', 'ENSG00000107611|ENST00000377833|CUBN'] 92390 22442 RQRFLCLRRW True PC9_epitope_Rep6 1432.7986258851997 1432.7975299358602 99.319 2 -1.66066295042408 0.42598600544860565 1.0 ['ENST00000466292.1_1_3:119033568-119041517:-|nuORF'] 41521 13600 IDAQDRVLLLH True PC9_epitope_Rep5 1291.72483472491 1291.72372993586 57.337 2 -1.6606778545020615 0.42598600544860565 1.0 ['ENSG00000138835|ENST00000695401|RGS3', 'nc|ENSG00000138835|P49796-6|RGS3', 'nc|ENSG00000138835|P49796|RGS3', 'nc|ENSG00000138835|P49796-5|RGS3'] 79853 14718 PIHQVRHMAF True H1975_Epitope_Rep3 1234.63933127914 1234.6382299358602 61.986 2 -1.6607500254865935 0.4259924941219027 1.0 ['ENSG00000176444|ENST00000368361|CLK2', 'nc|ENSG00000176444|P49760-3|CLK2', 'ENST00000497188.1_1_1:155234069-155238352:-|nuORF'] 59513 10026 LGPPPLTV True NCI_RA007_Epitope_Rep2 792.4745402864801 792.47344993586 43.603 2 -1.6608403774318934 0.42599416725069517 1.0 ['ENST00000564098.5_1_16:1794388-1794685:+|nuORF'] 97259 7319 SFNPIISSQ True H1975_Epitope_Rep3 991.4974605590301 991.49636993586 33.126 2 -1.6608529860130323 0.42599416725069517 1.0 ['nc|ENSG00000141576|Q96PX1-2|RNF157', 'ENSG00000141576|ENST00000269391|RNF157'] 120951 16626 VGELDTRKAI True PC9_epitope_Rep2 1100.61897267404 1100.6178699358602 69.197 2 -1.6609427050885992 0.4259958403038387 1.0 ['ENSG00000125966|ENST00000246186|MMP24'] 115050 23421 TTQLSSKS True NCI_RA007_Epitope_Rep1 850.43961132974 850.43850993586 96.463 2 -1.6609434575876711 0.4259958403038387 1.0 ['ENSG00000197563|ENST00000640252|PIGN', 'ENST00000587942.1_1_18:59713091-59751818:-|nuORF'] 117545 8587 VAGDEQEDS True H1975_Epitope_Rep2 948.36723423512 948.36668496793 37.983 1 -1.6611359998039803 0.4260314230812705 1.0 ['ENSG00000046889|ENST00000288368|PREX2'] 6439 15971 APSNTFVAP True PC9_epitope_Rep1 902.4497820906199 902.44923496793 66.239 1 -1.6611873096139982 0.4260314230812705 1.0 ['nc|ENSG00000172534|P51610-4|HCFC1', 'ENSG00000172534|ENST00000310441|HCFC1', 'nc|ENSG00000172534|P51610-2|HCFC1'] 18728 20940 ELDLASRSF True PC9_epitope_Rep2 1036.5189242796 1036.5178299358602 85.993 2 -1.6613811422588287 0.42603476727626194 1.0 ['nc|ENSG00000153303|Q8N878-2|FRMD1', 'ENSG00000153303|ENST00000283309|FRMD1'] 57868 5254 LEQELQPDL True H1975_Epitope_Rep3 1083.54480467427 1083.54370993586 25.295 2 -1.6614720142171628 0.42603476727626194 1.0 ['ENSG00000124215|ENST00000348616|CDH26', 'nc|ENSG00000124215|Q8IXH8-5|CDH26', 'nc|ENSG00000124215|Q8IXH8-2|CDH26'] 133380 14977 WFLWKQRDQRW True NCI_RA007_Epitope_Rep1 1647.8422645189899 1647.84116993586 62.32 2 -1.6615688161255315 0.42603476727626194 1.0 ['ENST00000529107.5_2_17:72211823-72233491:+|nuORF', 'ENST00000269346.8_1_17:72209689-72233491:+|nuORF'] 40725 6550 HTVEAAPP True NCI_RA007_Epitope_Rep1 820.4079172786398 820.40682993586 29.493 2 -1.661583777339938 0.42603476727626194 1.0 ['ENST00000342572.12_1_17:80400840-80401323:-|nuORF'] 61822 13253 LLKYRFFYQFL True H1975_Epitope_Rep1 1536.8493069620397 1536.84820993586 56.074 2 -1.6616666378729932 0.42604125459169256 1.0 ['ENSG00000223501|ENST00000445902|VPS52', 'nc|ENSG00000223501|Q8N1B4-2|VPS52', 'ENST00000495755.1_1_6:33235423-33235928:-|nuORF'] 73313 15122 NELDRYHRIIE True PC9_epitope_Rep4 1456.7422756941999 1456.7411699358602 66.094 2 -1.6616913329091283 0.42605904426059044 1.0 ['ENSG00000125864|ENST00000377873|BFSP1', 'nc|ENSG00000125864|Q12934-3|BFSP1', 'nc|ENSG00000125864|Q12934-2|BFSP1'] 82853 7769 PVTLRWYLAM True NCI_RA007_Epitope_Rep1 1248.66890007192 1248.66780993586 34.209 2 -1.6618217161881659 0.42607683352735737 1.0 ['DSCAM|p.T62M|1|0.09|ENSG00000171587|chr21:40708630-40708630|G/A|missense_variant'] 41454 9552 IAVVSPYNLQ True H1975_Epitope_Rep3 1102.60225998074 1102.60116993586 41.75 2 -1.6619545616975544 0.42611241085455304 1.0 ['ENSG00000132740|ENST00000255078|IGHMBP2'] 55616 12155 LCTYVIHI True NCI_RA007_Epitope_Rep5 960.5102741722001 960.50916993586 53.408 2 -1.662031719105897 0.42611241085455304 1.0 ['nc|ENSG00000131233|P57773-2|GJA9', 'ENSG00000131233|ENST00000357771|GJA9'] 95955 4357 SDYSFSVIAMS True PC9_epitope_Rep6 1205.52744035797 1205.52634993586 23.848 2 -1.6621177887909875 0.42613019891500903 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 7414 15851 ASASIPFH True PC9_epitope_Rep2 828.4130026590801 828.4124549679301 66.23 1 -1.6624137318690555 0.4261416931300643 1.0 ['PCDHA9|p.R623H|1|0.07|ENSG00000204961|chr5:140850363-140850363|G/A|missense_variant'] 103213 23002 SQRIQRPGR True PC9_epitope_Rep5 1096.62137271588 1096.62026993586 93.468 2 -1.6624448308827158 0.4261416931300643 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 135745 19616 YELGVVRNF True PC9_epitope_Rep5 1095.57129420563 1095.57018993586 80.506 2 -1.6624515034810021 0.4261416931300643 1.0 ['PDE6B|p.K532N|1|0.54|ENSG00000133256|chr4:660595-660595|G/C|missense_variant'] 131692 24558 VWRIRQLLRR True NCI_RA007_Epitope_Rep5 1394.8735050776197 1394.87240993586 101.93 2 -1.662465812579994 0.4261416931300643 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33', 'nc|ENSG00000167612|Q7Z3H0-1|ANKRD33'] 24399 18877 FAFKISPK True PC9_epitope_Rep6 936.5432885526399 936.54218993586 85.259 2 -1.6625703182642972 0.4261416931300643 1.0 ['ENSG00000173281|ENST00000310455|PPP1R3B'] 33367 10439 GLELLTSGDPP True NCI_RA007_Epitope_Rep2 1097.56045473841 1097.5593499358602 45.197 2 -1.6625988431292982 0.4261416931300643 1.0 ['REL-MAN1A2|1|fusion', 'nc|ENSG00000162924|Q04864|REL'] 120799 8764 VGDARLQL True PC9_epitope_Rep3 870.4923156089399 870.49120993586 38.664 2 -1.662671002490477 0.4261416931300643 1.0 ['nc|ENSG00000103005|Q9BQ65-2|USB1', 'ENSG00000103005|ENST00000219281|USB1', 'ENST00000566082.1_1_16:58051091-58054146:+|nuORF'] 86317 21419 QQHLRHLAV True PC9_epitope_Rep5 1100.6203100867199 1100.61920993586 87.452 2 -1.6628363481252266 0.42615947925142394 1.0 ['ENST00000470876.1_1_5:133910554-133910710:+|nuORF'] 122271 22574 VGRRRTSR True PC9_epitope_Rep5 986.5845932843399 986.58404496793 91.83 1 -1.662936672539548 0.4261611481523336 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 101692 23807 SPGALLPRHR True PC9_epitope_Rep2 1102.63596015086 1102.63537496793 97.043 1 -1.6629447274462252 0.4261611481523336 1.0 ['ENSG00000129910|ENST00000289746|CDH15'] 37863 17240 HDSLFLAC True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 73.088 2 -1.6629604233555697 0.4261676328666192 1.0 ['nc|ENSG00000197603|Q9H799-5|CPLANE1', 'ENSG00000197603|ENST00000651892|CPLANE1', 'nc|ENSG00000197603|Q9H799|CPLANE1'] 24522 17585 FAKIDDRLV True PC9_epitope_Rep2 1075.60259433391 1075.6014899358602 72.918 2 -1.6630609846280584 0.42617411743434436 1.0 ['ENST00000401088.8_1_1:16722851-16723172:+|nuORF'] 17014 10211 EGLLSVAL True NCI_RA007_Epitope_Rep1 800.4643695256 800.46326993586 43.729 2 -1.6631844433655218 0.4261822701847562 1.0 ['ENSG00000127903|ENST00000537055|ZNF835'] 78219 13130 PAPSKALSGP True PC9_epitope_Rep2 923.5076313199099 923.50652993586 55.777 2 -1.6632167799388184 0.4261822701847562 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1'] 21263 8677 ERILPALSK True H1975_Epitope_Rep1 1025.6233297784897 1025.62222993586 38.305 2 -1.6632334858579858 0.4261822701847562 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'ENST00000374089.5_1_1:27426800-27429818:-|nuORF'] 121864 12755 VGPALAPAPAP True PC9_epitope_Rep6 959.5440168286299 959.54290993586 60.548 2 -1.663351785681014 0.42620005423973967 1.0 ['ENSG00000105610|ENST00000264834|KLF1'] 55396 7409 LASTPQSP True PC9_epitope_Rep1 799.40758292547 799.40648993586 33.312 2 -1.6634001899387998 0.426206538074737 1.0 ['ENST00000392432.6_1_3:194308573-194308774:-|nuORF'] 129617 9642 VTGVYTGA True H1975_Epitope_Rep2 766.3861192048998 766.38502993586 42.066 2 -1.6634128861630064 0.4262130217632037 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 30687 15620 GALNKSTV True NCI_RA007_Epitope_Rep5 788.43921740692 788.4386649679301 66.792 1 -1.6635503001192997 0.4262647035559724 1.0 ['CD47|p.V146Cfs*18|1|0.19|ENSG00000196776|chr3:108071147-108071148|-/A|frameshift_variant', 'nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47'] 88316 12671 QYLEYDRFLL True H1975_Epitope_Rep3 1358.6870522338597 1358.6859499358602 53.949 2 -1.663735327341162 0.4262713683663439 1.0 ['RGS7|p.P295R|1|0.19|ENSG00000182901|chr1:240813690-240813690|G/C|missense_variant'] 121920 10554 VGPPGEPGP True PC9_epitope_Rep3 805.39701824177 805.39592993586 45.544 2 -1.6638256832853326 0.4262713683663439 1.0 ['ENSG00000080573|ENST00000264828|COL5A3'] 55123 16157 LALTSPVPRY True PC9_epitope_Rep2 1115.6338944621898 1115.63278993586 67.402 2 -1.6638901487351412 0.4262713683663439 1.0 ['nc|ENSG00000142513|Q9BZG2-3|ACP4'] 35690 19818 GTPHYYRRK True H1975_Epitope_Rep3 1176.6152247062798 1176.61357490379 82.971 3 -1.6639090464411983 0.4262713683663439 1.0 ['ENST00000372004.7_1_20:46256675-46256735:+|nuORF'] 35297 6384 GSRYSRLKQL True NCI_RA007_Epitope_Rep3 1206.6833042660999 1206.6816449037901 32.114 3 -1.663940909965481 0.4262713683663439 1.0 ['ENST00000296543.9_1_4:140222738-140222885:+|nuORF'] 3592 9546 AGPGRLRL True PC9_epitope_Rep6 838.5137197598599 838.51262993586 47.004 2 -1.6640075597010267 0.4262713683663439 1.0 ['ENSG00000225556|ENST00000694868|C2CD4D'] 120473 18672 VFVLPFPV True NCI_RA007_Epitope_Rep3 916.5422259234799 916.54112993586 81.682 2 -1.6640213193382072 0.4262713683663439 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 91789 12393 RPLKIVWGIFF True NCI_RA007_Epitope_Rep1 1374.81761291094 1374.81595490379 52.182 3 -1.6640557395457467 0.4262713683663439 1.0 ['nc|ENSG00000168216|Q9NUN5-3|LMBRD1', 'ENSG00000168216|ENST00000649934|LMBRD1', 'nc|ENSG00000168216|Q9NUN5-4|LMBRD1', 'nc|ENSG00000168216|Q9NUN5-2|LMBRD1'] 36075 12511 GVEDGDRP True PC9_epitope_Rep5 843.3722600459099 843.3711699358599 53.122 2 -1.664163500414752 0.4262730343806844 1.0 ['ENST00000536760.1_1_12:110002806-110011285:-|nuORF', 'ENSG00000139428|ENST00000545712|MMAB'] 55553 9302 LCCLADTSC True PC9_epitope_Rep1 927.3500106733101 927.3494649679301 40.634 1 -1.6642646000880361 0.4262730343806844 1.0 ['ENST00000483458.1_1_9:131831674-131832729:+|nuORF'] 118430 20232 VDPNGFFLYW True PC9_epitope_Rep5 1256.5866099165999 1256.58550993586 82.87 2 -1.6642832864648722 0.42627470031973425 1.0 ['ENSG00000149782|ENST00000279230|PLCB3'] 94190 7312 RWLWWQPWWWK True H1975_Epitope_Rep3 1756.8779217517197 1756.87682993586 33.098 2 -1.664408141591153 0.42627470031973425 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1'] 125692 10550 VNAEPAAF True H1975_Epitope_Rep1 817.39701824177 817.39646496793 45.536 1 -1.6644466676377965 0.4262811822125813 1.0 ['ENST00000496015.5_1_14:74759767-74762615:-|nuORF', 'ENST00000489678.1_1_14:74761849-74763214:-|nuORF', 'ENST00000554453.5_1_14:74759931-74766908:-|nuORF', 'ENSG00000119688|ENST00000356924|ABCD4'] 72319 12086 MSQLYFFLVF True PC9_epitope_Rep4 1293.64676764501 1293.64513490379 54.293 3 -1.6646902291765122 0.4263215572853705 1.0 ['ENSG00000196119|ENST00000284287|OR8A1', 'nc|ENSG00000196119|Q8NGG7|OR8A1'] 140751 5620 YYQRWGDDYDE True NCI_RA007_Epitope_Rep1 1508.5844376401199 1508.58334993586 25.923 2 -1.664774162038839 0.42632488674491903 1.0 ['ENST00000554165.1_1_14:91850766-91884010:-|nuORF'] 79608 17473 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 73.996 2 -1.664802168805203 0.42632488674491903 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 4957 13542 ALIEHYKTHTR True PC9_epitope_Rep5 1367.73098273451 1367.72988993586 57.111 2 -1.6648091176910524 0.42632488674491903 1.0 ['ENSG00000187792|ENST00000341976|ZNF70'] 123284 22762 VHSEMFVG True NCI_RA007_Epitope_Rep5 904.4112884069199 904.41018993586 94.758 2 -1.664824672097933 0.42632488674491903 1.0 ['nc|ENSG00000151164|Q6WBX8-3|RAD9B', 'nc|ENSG00000151164|Q6WBX8-4|RAD9B', 'nc|ENSG00000151164|Q6WBX8-2|RAD9B', 'nc|ENSG00000151164|Q6WBX8-1|RAD9B', 'ENSG00000151164|ENST00000409300|RAD9B', 'nc|ENSG00000151164|Q6WBX8|RAD9B'] 138723 15977 YRYCYLNWDHY True H1975_Epitope_Rep3 1594.66633387262 1594.66522993586 66.913 2 -1.6650608347326972 0.42633784837153604 1.0 ['nc|ENSG00000163354|Q5T1A1-2|DCST2', 'ENSG00000163354|ENST00000368424|DCST2'] 39316 17722 HLRRCLHHP True NCI_RA007_Epitope_Rep5 1167.6195988940701 1167.6179549037902 74.949 3 -1.6650978503531215 0.42633784837153604 1.0 ['ENST00000532851.1_1_1:110171948-110172194:+|nuORF'] 41488 22053 ICGRKKCLRH True PC9_epitope_Rep6 1212.6695858616 1212.6690749679299 97.761 1 -1.6654757780578946 0.4263413532135999 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-2|ARHGEF40', 'ENST00000554514.1_1_14:21549058-21555515:+|nuORF', 'ENST00000555232.5_1_14:21549679-21554039:+|nuORF'] 71536 18571 MKWVRLTKP True NCI_RA007_Epitope_Rep5 1157.6743198055299 1157.67268490379 78.253 3 -1.6655170961335355 0.4263413532135999 1.0 ['nc|ENSG00000145868|Q6PIJ6-3|FBXO38', 'nc|ENSG00000145868|Q6PIJ6-2|FBXO38', 'ENSG00000145868|ENST00000340253|FBXO38', 'ENST00000502571.1_1_5:147784249-147790417:+|nuORF', 'FBXO38|p.S825Vfs*7|1|0.43|ENSG00000145868|chr5:148427760-148427761|-/G|frameshift_variant'] 48111 26432 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 108.79 3 -1.665550227487028 0.4263413532135999 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 118678 12546 VEARRHQRLQ True PC9_epitope_Rep4 1291.7221493863099 1291.72104993586 56.078 2 -1.6655747871927007 0.4263413532135999 1.0 ['ENST00000606619.1_1_13:52767360-52768512:-|nuORF', 'ENST00000606974.5_1_13:52760947-52768512:-|nuORF', 'ENST00000423686.1_1_13:52763934-52768509:-|nuORF', 'ENST00000416599.5_1_13:52768206-52768563:-|nuORF'] 123482 24718 VIGIHIGV True PC9_epitope_Rep4 806.50142374066 806.50087496793 103.57 1 -1.6655920738281058 0.4263413532135999 1.0 ['ENSG00000174498|ENST00000327987|IGDCC3'] 110250 23284 TIETVLRR True PC9_epitope_Rep1 986.5872786229398 986.58618993586 94.349 2 -1.6656597189391535 0.4263413532135999 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ATG2A|p.E596Tfs*28|1|0.22|ENSG00000110046|chr11:64910117-64910118|-/CACGT|frameshift_variant', 'ENSG00000110046|ENST00000377264|ATG2A', 'nc|ENSG00000110046|Q2TAZ0-3|ATG2A'] 82912 22965 PWAWVPRW True PC9_epitope_Rep4 1096.5606699522798 1096.55956993586 96.554 2 -1.6657370978402832 0.4263413532135999 1.0 ['EPHA2|p.G240Vfs*153|1|0.11|ENSG00000142627|chr1:16148482-16148482|C/-|frameshift_variant'] 123161 15201 VHGGGGGG True NCI_RA007_Epitope_Rep5 596.26667277856 596.2661249679301 65.154 1 -1.6657396075615711 0.4263413532135999 1.0 ['ENST00000601673.1_7:6523004-6523760:+|nuORF'] 122691 14320 VGTTIFTGF True H1975_Epitope_Rep2 941.4858332461699 941.48472993586 60.23 2 -1.6657628719580932 0.4263413532135999 1.0 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1-3|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15', 'PCDH15|p.G458Vfs*24|1|0.21|ENSG00000150275|chr10:54185201-54185201|C/-|frameshift_variant', 'PCDH15|p.P161T|1|0.79|ENSG00000150275|chr10:54346478-54346478|G/T|missense_variant'] 28627 20020 FSRQREKMERR True NCI_RA007_Epitope_Rep5 1521.7946627035697 1521.7935699358602 83.925 2 -1.6657678249078398 0.4263413532135999 1.0 ['ENSG00000229549|ENST00000287721|TSPY8', 'nc|ENSG00000258992|Q01534-2|TSPY1', 'ENSG00000258992|ENST00000451548|TSPY1', 'ENSG00000236424|ENST00000428845|TSPY10', 'ENSG00000228927|ENST00000457222|TSPY3', 'ENSG00000168757|ENST00000320701|TSPY2', 'ENSG00000238074|ENST00000440215|TSPY9', 'ENSG00000233803|ENST00000426950|TSPY4'] 109143 5261 TFLNRGED True NCI_RA007_Epitope_Rep2 950.4457593393398 950.44466993586 25.085 2 -1.6657982036753542 0.4263413532135999 1.0 ['nc|ENSG00000091039|Q9BZF1-3|OSBPL8', 'nc|ENSG00000091039|Q9BZF1-2|OSBPL8', 'ENSG00000091039|ENST00000261183|OSBPL8'] 15939 10205 EDSQWEEILKQ True NCI_RA007_Epitope_Rep2 1403.6568743043897 1403.65576993586 44.284 2 -1.6658155646777504 0.42634783296246515 1.0 ['ENSG00000162813|ENST00000322067|BPNT1', 'nc|ENSG00000162813|O95861-2|BPNT1', 'nc|ENSG00000162813|O95861-3|BPNT1', 'ENST00000548668.1_1_1:220240634-220247398:-|nuORF'] 79243 20434 PGGHSCLV True NCI_RA007_Epitope_Rep5 768.35885891124 768.35776993586 85.536 2 -1.6659161733151102 0.4263607920210543 1.0 ['ENST00000460804.5_1_1:21048287-21050865:-|nuORF', 'nc|ENSG00000189410|Q6ZV89-2|SH2D5', 'SH2D5|p.V374Yfs*2|1|0.31|ENSG00000189410|chr1:20721944-20721945|CC/-|frameshift_variant', 'ENSG00000189410|ENST00000444387|SH2D5', 'SH2D5|p.E288K|1|0.28|ENSG00000189410|chr1:20723672-20723672|C/T|missense_variant'] 67323 10178 LTDQFTITMW True H1975_Epitope_Rep3 1254.59546034814 1254.5943699358602 44.194 2 -1.6659525550764631 0.4263607920210543 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF', 'CLSTN2|p.V466*|1|0.33|ENSG00000158258|chr3:140532374-140532374|G/-|frameshift_variant', 'CLSTN2|p.M385K|1|0.21|ENSG00000158258|chr3:140459701-140459701|T/A|missense_variant'] 93722 19334 RTRHRALHR True NCI_RA007_Epitope_Rep1 1201.7016887252498 1201.70058993586 79.36 2 -1.6660628344903874 0.42640316205533596 1.0 ['ENSG00000168275|ENST00000366615|COA6'] 10295 17979 CGYPLVSC True NCI_RA007_Epitope_Rep5 840.35099664948 840.34988993586 75.943 2 -1.6660753021059265 0.42640316205533596 1.0 ['nc|ENSG00000135119|Q96EX2-2|RNFT2'] 79611 20353 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 85.226 2 -1.6660799500378671 0.42640316205533596 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 95417 24016 SAKKPCPV True PC9_epitope_Rep4 828.4527592960799 828.45166993586 100.85 2 -1.6661183944387263 0.42640316205533596 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 67998 17423 LTLWEKRTA True PC9_epitope_Rep5 1116.62914343492 1116.6280499358602 72.018 2 -1.666138721393175 0.42640316205533596 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'ENST00000502950.1_1_4:183601480-183676413:+|nuORF'] 124006 25314 VKLGPALK True H1975_Epitope_Rep3 824.5483739330799 824.5478249679301 105.3 1 -1.6662368492561863 0.42640316205533596 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 45424 7446 ISDSEPKP True H1975_Epitope_Rep3 871.4287122928699 871.42816496793 33.62 1 -1.666380707886172 0.42640316205533596 1.0 ['ENST00000523812.1_1_8:144357822-144358971:+|nuORF'] 10578 18749 CRLRKKIKP True NCI_RA007_Epitope_Rep4 1140.72775236072 1140.7261049037902 81.113 3 -1.666406674111125 0.42640316205533596 1.0 ['ENST00000461039.1_1_1:64021028-64034235:+|nuORF', 'nc|ENSG00000203965|A8K855-2|EFCAB7', 'ENSG00000203965|ENST00000371088|EFCAB7'] 52 18264 AAAGRRRQAP True NCI_RA007_Epitope_Rep1 1052.59515796804 1052.59457496793 75.183 1 -1.6664665097123152 0.42640316205533596 1.0 ['nc|ENSG00000112541|A8K010|LINC00473', 'ENST00000455853.1_1_6:166353685-166401023:-|nuORF'] 128801 23183 VSRKGRTP True PC9_epitope_Rep1 899.5300980999899 899.52900993586 93.968 2 -1.6664909088894209 0.42640316205533596 1.0 ['ENST00000496823.1_1_3:187455030-187463237:-|nuORF'] 129571 18412 VTGKEYSV True PC9_epitope_Rep5 881.44944773745 881.4488949679301 75.842 1 -1.6665578142731303 0.42640316205533596 1.0 ['ENST00000552656.5_1_12:56610319-56615704:-|nuORF', 'ENST00000345093.8_1_12:56610319-56615573:-|nuORF'] 90297 25663 RHVHLRGTR True PC9_epitope_Rep1 1130.6533415504998 1130.65224993586 103.75 2 -1.6665693415834268 0.42640316205533596 1.0 ['ENST00000233336.6_1_2:113239851-113239944:+|nuORF'] 22700 7294 ETVNDFWRMV True NCI_RA007_Epitope_Rep1 1295.59685733047 1295.59576993586 32.363 2 -1.6666408548972884 0.42640316205533596 1.0 ['PTPRE|p.W223L|1|0.26|ENSG00000132334|chr10:128063125-128063125|G/T|missense_variant', 'nc|ENSG00000132334|P23469-3|PTPRE', 'nc|ENSG00000132334|P23469-2|PTPRE', 'PTPRE|p.S694Ffs*2|1|0.19|ENSG00000132334|chr10:128082879-128082880|-/T|frameshift_variant', 'ENSG00000132334|ENST00000254667|PTPRE'] 48134 25877 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 107.74 3 -1.666736505894713 0.42640316205533596 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 61757 22115 LLKCLKDFAFN True PC9_epitope_Rep5 1310.7056795034598 1310.7045899358602 90.1 2 -1.6667422016673876 0.42640316205533596 1.0 ['ENSG00000181381|ENST00000682922|DDX60L'] 29843 15457 FVVLIVPM True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 67.123 2 -1.666749182139616 0.42640316205533596 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 71525 23577 MKTERPPA True NCI_RA007_Epitope_Rep3 928.4800366730798 928.47892993586 102.28 2 -1.6667699682073338 0.42640316205533596 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant', 'MUC16|p.T2806Lfs*14|1|0.17|ENSG00000181143|chr19:8972724-8972724|G/-|frameshift_variant', 'MUC16|p.T1020Kfs*94|1|0.4|ENSG00000181143|chr19:8978077-8978080|ATGG/TTT|frameshift_variant', 'MUC16|p.G1889Efs*8|2|0.24|ENSG00000181143|chr19:8975473-8975473|C/-|frameshift_variant', 'MUC16|p.A1931Pfs*2|1|0.24|ENSG00000181143|chr19:8975348-8975348|C/-|frameshift_variant', 'MUC16|p.P541A|1|0.09|ENSG00000181143|chr19:8979518-8979518|G/C|missense_variant'] 55650 9319 LDALSPFLR True H1975_Epitope_Rep1 1030.5811306133398 1030.58002993586 40.753 2 -1.6668807711823577 0.4264096396426918 1.0 ['nc|ENSG00000167566|Q9HCH0-2|NCKAP5L', 'ENSG00000167566|ENST00000335999|NCKAP5L'] 67860 3576 LTKELMPRF True NCI_RA007_Epitope_Rep2 1133.6267009067699 1133.62504490379 18.56 3 -1.6669567738119586 0.42642259437850777 1.0 ['ENSG00000017797|ENST00000383432|RALBP1'] 121224 21231 VGGPNGGK True PC9_epitope_Rep4 684.35548778296 684.35493496793 89.829 1 -1.6669621547364086 0.42642259437850777 1.0 ['ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1'] 12109 8856 DIGCFAIYFL True NCI_RA007_Epitope_Rep1 1160.55761828744 1160.55652993586 38.448 2 -1.667104292681411 0.4264516566163019 1.0 ['MPI|p.N258S|1|0.27|ENSG00000178802|chr15:74896254-74896254|A/G|missense_variant', 'nc|ENSG00000178802|P34949-2|MPI', 'ENSG00000178802|ENST00000352410|MPI'] 32385 23445 GGFYTCSD True NCI_RA007_Epitope_Rep3 848.3010692515999 848.29996993586 101.76 2 -1.6671343644751049 0.42645813336344646 1.0 ['ENSG00000001036|ENST00000002165|FUCA2'] 41355 22131 IAMHLRFPF True NCI_RA007_Epitope_Rep3 1130.60590589254 1130.6048099358602 96.165 2 -1.66717190641496 0.42646460996431634 1.0 ['ENST00000592895.5_1_19:1986085-1986331:-|nuORF'] 3518 13756 AGLTPPSDRAI True PC9_epitope_Rep4 1096.58767254576 1096.58656993586 60.808 2 -1.6674669171183467 0.4264823785810269 1.0 ['ENSG00000141012|ENST00000268695|GALNS', 'ENST00000568613.5_1_16:88880849-88909575:-|nuORF'] 65704 8984 LSHLRHLG True NCI_RA007_Epitope_Rep4 931.5351834804301 931.53408993586 41.392 2 -1.6675107751456457 0.426488854761851 1.0 ['ENST00000533407.6_1_11:6422737-6440257:-|nuORF'] 4519 21567 AKPGGFGMG True PC9_epitope_Rep6 820.3901590395199 820.38906993586 95.834 2 -1.667598759930119 0.4264953307964182 1.0 ['nc|ENSG00000116675|O75061-4|DNAJC6', 'nc|ENSG00000116675|O75061|DNAJC6', 'ENSG00000116675|ENST00000371069|DNAJC6'] 92777 3827 RRKREKHKHN True NCI_RA007_Epitope_Rep1 1387.8021310425097 1387.80049490379 18.891 3 -1.6678486476944747 0.42649699077472025 1.0 ['ENSG00000188177|ENST00000409871|ZC3H6'] 5330 6499 ALSLQQNYPPV True NCI_RA007_Epitope_Rep5 1228.6451874218799 1228.6440899358602 31.664 2 -1.6678508011831927 0.42649699077472025 1.0 ['ENSG00000148468|ENST00000378116|FAM171A1'] 118160 6520 VAVNPKEI True PC9_epitope_Rep1 868.50181766348 868.50072993586 29.882 2 -1.667867291152301 0.426505126236394 1.0 ['nc|ENSG00000113810|Q9NTJ3-2|SMC4', 'ENSG00000113810|ENST00000357388|SMC4', 'ENST00000462668.5_1_3:160131924-160151594:+|nuORF'] 41423 12282 IASVDAFQGR True PC9_epitope_Rep3 1062.5458077337798 1062.54470993586 52.27 2 -1.6679756636088543 0.426505126236394 1.0 ['nc|ENSG00000005007|Q92900|UPF1', 'ENSG00000005007|ENST00000262803|UPF1'] 55173 20337 LAPATYRLV True PC9_epitope_Rep1 1002.58621599378 1002.58510993586 83.057 2 -1.6679834370211981 0.426505126236394 1.0 ['TBX10|p.P324L|1|0.4|ENSG00000167800|chr11:67631792-67631792|G/A|missense_variant'] 60846 21268 LKLHPCLA True PC9_epitope_Rep4 893.5156939058099 893.51458993586 89.976 2 -1.668224339564501 0.4265228927906058 1.0 ['ENSG00000256525|ENST00000539111|POLG2', 'ENST00000585104.1_1_17:62477530-62481889:-|nuORF'] 125708 8386 VNEEQPEAK True NCI_RA007_Epitope_Rep2 1042.4931034545798 1042.4925749679298 37.26 1 -1.668306516666483 0.42652621120256523 1.0 ['ENSG00000165164|ENST00000378653|CFAP47'] 128543 8044 VSHGPCPV True PC9_epitope_Rep6 794.37450897538 794.37340993586 40.428 2 -1.6683232458326416 0.42652621120256523 1.0 ['ENST00000476555.5_1_6:24775851-24775938:+|nuORF'] 122269 22613 VGRRRTSR True PC9_epitope_Rep2 986.5845932843399 986.58404496793 92.477 1 -1.6683350371126247 0.42652621120256523 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 84509 7420 QGSSPPPP True PC9_epitope_Rep3 765.36571811349 765.36462993586 33.548 2 -1.6683414690309304 0.42652621120256523 1.0 ['ENSG00000145495|ENST00000274140|MARCHF6', 'nc|ENSG00000145495|O60337-6|MARCHF6', 'nc|ENSG00000145495|O60337-5|MARCHF6'] 123733 16606 VIQWQRISEWK True NCI_RA007_Epitope_Rep1 1471.79358299107 1471.7924899358602 68.712 2 -1.668502230394239 0.42657200582412497 1.0 ['ENST00000556551.2_1_14:74325599-74340738:+|nuORF'] 122911 5124 VGVSLRQR True NCI_RA007_Epitope_Rep4 913.5457481641299 913.54464993586 26.224 2 -1.6687091379298145 0.42657200582412497 1.0 ['ENST00000311549.10_1_13:27825489-27827914:+|nuORF'] 116680 19947 TYIRRYIL True NCI_RA007_Epitope_Rep3 1096.6393141958 1096.63820993586 86.928 2 -1.6687437127622413 0.42657200582412497 1.0 ['nc|ENSG00000112414|Q86SQ4-2|ADGRG6', 'nc|ENSG00000112414|Q86SQ4|ADGRG6', 'nc|ENSG00000112414|Q86SQ4-4|ADGRG6', 'ENSG00000112414|ENST00000367609|ADGRG6'] 94250 23295 RWRMLIQQF True PC9_epitope_Rep4 1276.6862814715598 1276.68518993586 97.858 2 -1.6688217515085664 0.42657200582412497 1.0 ['nc|ENSG00000090316|Q7L5Y9-3|MAEA', 'ENSG00000090316|ENST00000303400|MAEA', 'ENST00000503162.1_1_4:1326530-1332954:+|nuORF', 'ENST00000512289.5_1_4:1323768-1332954:+|nuORF', 'ENST00000514708.5_1_4:1309356-1332271:+|nuORF', 'ENST00000515766.1_1_4:1326530-1330951:+|nuORF', 'ENST00000506530.5_1_4:1326530-1332660:+|nuORF'] 81100 25158 PPGHEPGS True PC9_epitope_Rep1 776.3453170220799 776.34420993586 101.65 2 -1.6689470733563319 0.42657200582412497 1.0 ['ENST00000376227.3_1_X:49093621-49098531:+|nuORF'] 122528 18233 VGSTQRFFQG True PC9_epitope_Rep4 1125.55670677065 1125.5550749037902 78.203 3 -1.6689855929937423 0.42657200582412497 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2'] 28600 11733 FSQDHRSL True PC9_epitope_Rep6 988.47264279352 988.47154993586 56.283 2 -1.6689966052424166 0.42657200582412497 1.0 ['ENST00000311713.11_1_11:62601956-62602997:-|nuORF'] 16941 2140 EGENTQDKNKK True NCI_RA007_Epitope_Rep1 1289.62115750201 1289.61952490379 11.241 3 -1.669019903048459 0.42657200582412497 1.0 ['ENSG00000197157|ENST00000354725|SND1'] 34165 7635 GPFQVPENVF True NCI_RA007_Epitope_Rep3 1132.5553097883198 1132.5536549037902 37.16 3 -1.6690242904755865 0.42657200582412497 1.0 ['chr10:5010653-5012353|147|15.84|0.0|20.59|-|2|TE_info:MLT1D,MLT1D_dup12416,ERVL-MaLR,LTR,donor,+,5012353,5012778|AKR1C2,None|3'] 81278 24404 PPPTKKPEVV True H1975_Epitope_Rep3 1090.6386454894598 1090.63754993586 101.6 2 -1.6692147302120972 0.42657200582412497 1.0 ['ENSG00000162522|ENST00000401073|KIAA1522', 'nc|ENSG00000162522|Q9P206|NHSL3', 'nc|ENSG00000162522|Q9P206-3|NHSL3'] 36316 21187 GVGSHAAA True PC9_epitope_Rep6 668.32418765468 668.32363496793 94.344 1 -1.6693918512461539 0.42657200582412497 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 46919 18461 IVLDQKDHAV True PC9_epitope_Rep6 1136.61897267404 1136.6178699358602 83.65 2 -1.6694217826094535 0.42657200582412497 1.0 ['nc|ENSG00000086061|P31689-2|DNAJA1', 'ENSG00000086061|ENST00000330899|DNAJA1', 'ENST00000495015.5_1_9:33025323-33036160:+|nuORF', 'ENST00000465677.1_1_9:33034269-33037131:+|nuORF'] 83947 18734 QELCVCERL True PC9_epitope_Rep6 1091.51035082519 1091.50924993586 84.701 2 -1.6694567835539773 0.42657200582412497 1.0 ['ENST00000547616.2_1_14:19475147-19475555:-|nuORF', 'ENST00000438441.1_22:16365437-16366175:+|nuORF'] 81248 13143 PPPKKTSS True H1975_Epitope_Rep1 840.4705175352 840.46942993586 55.648 2 -1.6694585702043894 0.42657200582412497 1.0 ['ENSG00000174705|ENST00000311601|SH3PXD2B'] 90697 17664 RKLYNVMFAKK True NCI_RA007_Epitope_Rep3 1396.8013112237998 1396.79965490379 77.452 3 -1.6695637363744815 0.42657200582412497 1.0 ['ENSG00000111254|ENST00000228850|AKAP3'] 127719 14185 VRHRISHA True NCI_RA007_Epitope_Rep4 974.5522305269 974.55112993586 61.842 2 -1.6695666538089575 0.42657200582412497 1.0 ['ENSG00000183309|ENST00000526926|ZNF623', 'nc|ENSG00000183309|O75123|ZNF623'] 83128 21454 PYPYHICI True H1975_Epitope_Rep2 1004.4789740439201 1004.47786993586 88.769 2 -1.6695749360929109 0.42657200582412497 1.0 ['nc|ENSG00000145868|Q6PIJ6-3|FBXO38', 'nc|ENSG00000145868|Q6PIJ6-2|FBXO38', 'ENSG00000145868|ENST00000340253|FBXO38'] 92825 23129 RRLKKKKTTIK True PC9_epitope_Rep6 1398.9510866919798 1398.94998993586 102.07 2 -1.6696716662660103 0.42657200582412497 1.0 ['nc|ENSG00000134207|Q5T7P8-2|SYT6', 'ENSG00000134207|ENST00000610222|SYT6'] 79451 8463 PGPLSKQGS True PC9_epitope_Rep1 869.46068112749 869.45958993586 37.388 2 -1.6698084891430784 0.42657200582412497 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 13147 15381 DLSSPGMT True H1975_Epitope_Rep3 806.3480194440201 806.3474749679301 64.573 1 -1.6698371048863336 0.42657200582412497 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'PHC2|p.G541_N542del|1|0.29|ENSG00000134686|chr1:33334222-33334227|GTTTCC/-|inframe_deletion', 'ENST00000493483.5_1_1:33799498-33815372:-|nuORF', 'ENST00000485928.5_1_1:33797943-33815375:-|nuORF'] 5432 18782 ALWNRTAG True PC9_epitope_Rep4 887.4613498338299 887.46024993586 80.33 2 -1.6699610164572936 0.42657200582412497 1.0 ['ENSG00000019995|ENST00000359653|ZRANB1'] 19001 7222 ELGERLLQ True H1975_Epitope_Rep1 956.5290950404799 956.52798993586 32.79 2 -1.6699698787545714 0.42657200582412497 1.0 ['nc|ENSG00000140691|Q96C12-3|ARMC5', 'nc|ENSG00000140691|Q96C12-2|ARMC5', 'ENSG00000140691|ENST00000268314|ARMC5'] 92680 22965 RRGRNQQIA True PC9_epitope_Rep4 1097.61662168861 1097.6155299358602 96.554 2 -1.6699932464745673 0.42657200582412497 1.0 ['nc|ENSG00000141027|O75376-2|NCOR1', 'ENSG00000141027|ENST00000268712|NCOR1', 'nc|ENSG00000141027|O75376-3|NCOR1'] 82222 3871 PTHVTLTT True PC9_epitope_Rep4 868.46543215476 868.46432993586 21.071 2 -1.6700046591136453 0.42657200582412497 1.0 ['ENSG00000006432|ENST00000554752|MAP3K9', 'nc|ENSG00000006432|P80192-4|MAP3K9'] 5841 2626 APGHPDAAPP True NCI_RA007_Epitope_Rep3 928.4402800360799 928.43918993586 14.79 2 -1.6700363308122443 0.42657200582412497 1.0 ['nc|ENSG00000173826|Q9H252-1|KCNH6'] 94168 19722 RWLEKEERFLK True PC9_epitope_Rep1 1532.8463468399198 1532.84524993586 80.687 2 -1.670038685464959 0.42657200582412497 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 120477 22746 VFVLPFPV True PC9_epitope_Rep2 916.5422259234799 916.54112993586 92.987 2 -1.670120480670076 0.42657200582412497 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 25973 6866 FGYLLYGN True PC9_epitope_Rep5 945.4596184983299 945.45852993586 31.381 2 -1.6701529074992958 0.42657200582412497 1.0 ['CON__Q2KIU3'] 42316 20703 IEKSIIFNQ True PC9_epitope_Rep4 1090.60225998074 1090.60116993586 87.795 2 -1.6702209688805103 0.4265736633596316 1.0 ['ENSG00000104237|ENST00000220676|RP1', 'RP1|p.K1222Rfs*34|1|0.12|ENSG00000104237|chr8:54627546-54627547|-/GG|frameshift_variant'] 62390 19922 LLRRPLYR True PC9_epitope_Rep4 1085.68218206729 1085.6810899358602 84.764 2 -1.6702381273858788 0.4265736633596316 1.0 ['ENSG00000188505|ENST00000339852|NCCRP1'] 140766 5244 YYRGQWGT True PC9_epitope_Rep1 1029.4668291370897 1029.46572993586 25.018 2 -1.670376998253925 0.4265801354401806 1.0 ['ENSG00000164099|ENST00000296498|PRSS12', 'ENST00000503043.1_1_4:119234230-119239656:-|nuORF'] 27795 7216 FQEHKTEKPSL True NCI_RA007_Epitope_Rep3 1342.6881148630198 1342.68700993586 35.496 2 -1.6705330661889761 0.4265930791629986 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L', 'REV3L|p.S1886Kfs*2|1|0.15|ENSG00000009413|chr6:111372700-111372701|-/G|frameshift_variant', 'REV3L|p.I1992Nfs*33|1|0.51|ENSG00000009413|chr6:111367813-111367814|-/T|frameshift_variant', 'REV3L|p.M1011Nfs*5|1|0.26|ENSG00000009413|chr6:111375323-111375324|-/T|frameshift_variant'] 83138 21488 PYRLRRLRR True PC9_epitope_Rep6 1284.8003401373599 1284.7992499358602 95.527 2 -1.6705603853261721 0.4265930791629986 1.0 ['nc|ENSG00000168397|Q9Y4P1-2|ATG4B'] 122584 7230 VGTGFGSK True PC9_epitope_Rep2 751.38645355807 751.3859049679301 33.199 1 -1.6706448994793859 0.42659955080527745 1.0 ['ENST00000508232.1_1_6:43603609-43604431:+|nuORF'] 27487 6369 FPCFPLHLAE True NCI_RA007_Epitope_Rep2 1172.56885167748 1172.56774993586 29.381 2 -1.670712376896491 0.4266173084736581 1.0 ['ENST00000485835.1_1_17:38151035-38151804:+|nuORF'] 37356 9233 GVWVHLDIAAP True PC9_epitope_Rep3 1176.6291434349198 1176.6280499358602 40.456 2 -1.6707477045194215 0.4266237796964054 1.0 ['ENST00000527587.5_1_20:57288690-57290379:+|nuORF', 'nc|ENSG00000215440|Q8NDH3-5|NPEPL1', 'nc|ENSG00000215440|Q8NDH3-4|NPEPL1', 'ENSG00000215440|ENST00000356091|NPEPL1', 'ENST00000525068.1_1_20:57288807-57289834:+|nuORF'] 21792 11220 ESDLDRIMEHI True H1975_Epitope_Rep1 1356.634365038 1356.6332699358602 48.129 2 -1.6707564373821833 0.42663025077308536 1.0 ['HOMER1-DMGDH|1|fusion', 'ENSG00000132837|ENST00000255189|DMGDH', 'ENST00000518477.5_1_5:78317432-78365396:-|nuORF'] 86548 26056 QRAPKPLPRV True PC9_epitope_Rep4 1160.71421047156 1160.71310993586 110.24 2 -1.6709017711203065 0.4266480074937646 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 3312 16856 AGGPDRPRSRL True NCI_RA007_Epitope_Rep1 1180.6425020832799 1180.6419749679299 69.696 1 -1.670996223497128 0.4266561336192303 1.0 ['ENST00000481848.6_2_6:127837311-127837734:-|nuORF'] 85192 25256 QKENLRKFY True H1975_Epitope_Rep3 1224.6615061923599 1224.6604099358601 105.05 2 -1.6710680461984195 0.4266561336192303 1.0 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 110311 17617 TIHYQEEIYSF True H1975_Epitope_Rep1 1428.6561460284 1428.65504993586 73.305 2 -1.6711373363994837 0.4266561336192303 1.0 ['ENST00000487874.1_1_1:35496244-35497272:-|nuORF', 'ENST00000493328.5_1_1:35496244-35497238:-|nuORF'] 79895 16613 PILVMKFI True NCI_RA007_Epitope_Rep3 959.58779621691 959.58724496793 73.13 1 -1.6713435626191773 0.4266964598074731 1.0 ['nc|ENSG00000198522|Q9HCN4-3|GPN1'] 105652 17325 SVFPSFGRL True PC9_epitope_Rep6 1008.5392658013599 1008.53816993586 79.254 2 -1.6714080730069723 0.42669811427217225 1.0 ['ENST00000503498.1_1_3:129133914-129140362:-|nuORF'] 134475 18286 WTRQIKEML True PC9_epitope_Rep5 1203.6434136000698 1203.64177490379 75.352 3 -1.6714541650059334 0.42669811427217225 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'DNAH2|p.H377Tfs*8|1|0.45|ENSG00000183914|chr17:7737214-7737214|C/-|frameshift_variant', 'nc|ENSG00000183914|Q9P225-3|DNAH2'] 22430 23287 ETFRPKRGAA True NCI_RA007_Epitope_Rep5 1131.6148903531098 1131.61324490379 96.856 3 -1.6716769043450193 0.42673362297579415 1.0 ['ENST00000374791.7_1_11:132205045-132205564:+|nuORF'] 121796 14495 VGMSRSGT True NCI_RA007_Epitope_Rep4 793.37523725137 793.3746849679301 63.112 1 -1.6716868951950115 0.42673362297579415 1.0 ['nc|ENSG00000130294|Q12756|KIF1A', 'ENSG00000130294|ENST00000498729|KIF1A', 'nc|ENSG00000130294|Q12756-2|KIF1A'] 130770 7742 VVEAFGGL True NCI_RA007_Epitope_Rep5 790.4225047136199 790.42140993586 36.477 2 -1.6717106595830402 0.4267530298584938 1.0 ['ENST00000503718.2_1_8:104133327-104144958:+|nuORF'] 25749 17268 FFPPILPL True NCI_RA007_Epitope_Rep3 942.5578759876199 942.55676993586 75.812 2 -1.6717974006735812 0.4267530298584938 1.0 ['ENST00000233813.4_1_2:217538912-217539035:-|nuORF'] 79072 24371 PFSTLHWRLLW True PC9_epitope_Rep2 1454.78229003138 1454.78118993586 99.311 2 -1.6718045967441062 0.4267530298584938 1.0 ['ENST00000473720.5_1_2:130913661-130934206:-|nuORF'] 120967 11098 VGERALSS True NCI_RA007_Epitope_Rep5 817.4293809992099 817.42828993586 49.325 2 -1.6719742763451573 0.4267644569816643 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'nc|ENSG00000081842|Q9UN73-2|PCDHA6', 'PCDHA13|p.R619Hfs*37|1|0.2|ENSG00000239389|chr5:140884118-140884119|GC/-|frameshift_variant', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13', 'ENSG00000255408|ENST00000522353|PCDHA3', 'ENSG00000204969|ENST00000526136|PCDHA2', 'nc|ENSG00000204969|Q9Y5H9-2|PCDHA2', 'PCDHA2|p.Q534Rfs*2|1|0.46|ENSG00000204969|chr5:140796563-140796563|C/-|frameshift_variant', 'PCDHA3|p.R619Hfs*37|2|0.21|ENSG00000255408|chr5:140803049-140803050|GC/-|frameshift_variant', 'nc|ENSG00000204969|Q9Y5H9-3|PCDHA2', 'nc|ENSG00000255408|Q9Y5H8-2|PCDHA3', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'PCDHA7|p.S632Afs*6|1|0.5|ENSG00000204963|chr5:140836276-140836276|C/-|frameshift_variant', 'nc|ENSG00000204963|Q9UN72-2|PCDHA7'] 73659 15454 NGLKSLSA True NCI_RA007_Epitope_Rep4 788.43921740692 788.43812993586 67.111 2 -1.672003162814736 0.4267644569816643 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 37264 7142 GVVKEDDEA True NCI_RA007_Epitope_Rep4 960.4400052525598 960.43890993586 34.092 2 -1.6720908694206504 0.4267644569816643 1.0 ['CFAP69|p.T34K|1|0.47|ENSG00000105792|chr7:90245525-90245525|C/A|missense_variant'] 130482 9821 VTVPPIAP True NCI_RA007_Epitope_Rep5 792.47454028648 792.47344993586 44.422 2 -1.6722126048112873 0.4267644569816643 1.0 ['ENSG00000142197|ENST00000691173|DOP1B', 'nc|ENSG00000142197|Q9Y3R5-2|DOP1B', 'DOP1B|p.Q851H|1|0.22|ENSG00000142197|chr21:36233006-36233006|G/C|missense_variant'] 140253 5014 YWTNNDLY True PC9_epitope_Rep1 1087.46107505031 1087.45996993586 24.145 2 -1.6722706463120407 0.4267644569816643 1.0 ['nc|ENSG00000114841|Q9P2D7-8|DNAH1', 'ENSG00000114841|ENST00000420323|DNAH1', 'DNAH1|p.H3607Qfs*48|1|0.1|ENSG00000114841|chr3:52394657-52394658|-/A|frameshift_variant', 'nc|ENSG00000114841|Q9P2D7-6|DNAH1', 'ENST00000486752.5_1_3:52350520-52422757:+|nuORF'] 15448 10810 EANSYPLTPPH True NCI_RA007_Epitope_Rep1 1224.57750178488 1224.57640993586 46.044 2 -1.6723001012767966 0.4267644569816643 1.0 ['SFMBT2|p.A476P|1|0.19|ENSG00000198879|chr10:7205833-7205833|C/G|missense_variant'] 79812 5683 PIDSLEVVR True NCI_RA007_Epitope_Rep2 1026.57095985246 1026.5698699358602 26.719 2 -1.6723095043600715 0.4267644569816643 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB'] 109951 20003 THSGERPFNC True H1975_Epitope_Rep2 1146.4876412346598 1146.48598490379 82.92 3 -1.6723751154692197 0.4267934917518561 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 63654 13284 LPPAAINLL True PC9_epitope_Rep5 920.56950330048 920.56840993586 56.107 2 -1.6724755220800938 0.42681289419941554 1.0 ['nc|ENSG00000080815|P49768-3|PSEN1', 'nc|ENSG00000080815|P49768-5|PSEN1'] 137079 18978 YLAPHVRTLYT True NCI_RA007_Epitope_Rep3 1332.71902106848 1332.7173749037902 82.934 3 -1.6725100257196093 0.42681289419941554 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENSG00000169727|ENST00000578552|GPS1', 'nc|ENSG00000169727|Q13098|GPS1', 'nc|ENSG00000169727|Q13098-7|GPS1'] 91165 4414 RLPFREVYLHA True PC9_epitope_Rep6 1399.7724536236701 1399.7707949037901 24.116 3 -1.6725488859699411 0.42681289419941554 1.0 ['ENSG00000204394|ENST00000375663|VARS1'] 5161 17796 ALPDKVLLE True H1975_Epitope_Rep3 996.5855472874399 996.58444993586 74.449 2 -1.6726077338557 0.4268193613900485 1.0 ['ENSG00000212123|ENST00000419421|PRR22'] 47132 22899 IWELKMWRFP True PC9_epitope_Rep4 1404.73764833808 1404.73600490379 96.301 3 -1.6729073653650282 0.4268371111687784 1.0 ['ENST00000230538.11_1_6:112462098-112462671:-|nuORF'] 119433 5586 VEPHSPSPSSK True PC9_epitope_Rep6 1150.56185172074 1150.56074993586 29.533 2 -1.6732855276950864 0.4268999909739146 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 30451 16501 GAGDSLLQ True NCI_RA007_Epitope_Rep1 759.37628279719 759.37573496793 68.3 1 -1.6733991791541278 0.42691773944241984 1.0 ['ENST00000538791.3_1_11:114315223-114320694:+|nuORF'] 56056 20786 LDLCHTTS True H1975_Epitope_Rep1 888.4011176460401 888.40002993586 86.377 2 -1.6734125256539136 0.4269242051582914 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 129845 18375 VTLIRHHR True NCI_RA007_Epitope_Rep1 1030.61483078346 1030.61427496793 75.609 1 -1.6736164010368888 0.4269419529531224 1.0 ['ZNF169|p.Q421H|1|0.62|ENSG00000175787|chr9:94300821-94300821|G/T|missense_variant'] 67718 6049 LTGHLCAP True PC9_epitope_Rep3 810.40580910366 810.40470993586 28.318 2 -1.6736842085664798 0.4269597003474886 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 47985 18193 KAGHGKSKVRL True NCI_RA007_Epitope_Rep3 1179.72002412799 1179.71836490379 79.68 3 -1.6737005429283425 0.4269759256334469 1.0 ['nc|ENSG00000228741|Q96N96-4|SPATA13'] 18442 5142 EKHFQREEQER True NCI_RA007_Epitope_Rep2 1514.7226028787798 1514.72150993586 24.621 2 -1.673743700055751 0.4269759256334469 1.0 ['nc|ENSG00000135525|Q14244-2|MAP7', 'nc|ENSG00000135525|Q14244-6|MAP7', 'nc|ENSG00000135525|Q14244-4|MAP7', 'ENSG00000135525|ENST00000354570|MAP7', 'nc|ENSG00000135525|Q14244-7|MAP7', 'nc|ENSG00000135525|Q14244-5|MAP7', 'nc|ENSG00000135525|Q14244-3|MAP7'] 76933 5832 NVPDLMDEFI True PC9_epitope_Rep6 1191.54817580255 1191.54652490379 30.647 3 -1.673766530085152 0.4269759256334469 1.0 ['ENSG00000174373|ENST00000680220|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1', 'RALGAPA1|p.C1295Lfs*2|1|0.4|ENSG00000174373|chr14:35655901-35655902|-/A|frameshift_variant', 'nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1', 'nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1', 'ENST00000554652.5_1_14:36147090-36221314:-|nuORF'] 93923 24635 RVKKVVLVLLL True H1975_Epitope_Rep1 1278.9115132957797 1278.9104099358601 102.07 2 -1.6738098936508474 0.4269759256334469 1.0 ['ENSG00000212127|ENST00000537503|TAS2R14'] 20197 12146 ENSPTINEPK True NCI_RA007_Epitope_Rep2 1127.54586730343 1127.54527496793 51.839 1 -1.6738561286708546 0.4269759256334469 1.0 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 11088 8907 DEATWERMWKH True H1975_Epitope_Rep1 1487.66158284535 1487.6604899358601 39.164 2 -1.6738564112746794 0.4269759256334469 1.0 ['ENSG00000071246|ENST00000167106|VASH1', 'nc|ENSG00000071246|Q7L8A9-2|VASH1'] 27373 22310 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 92.966 2 -1.6742185115549684 0.4270387960696276 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 66692 14657 LSTFKLYRDKR True NCI_RA007_Epitope_Rep2 1425.8092330552097 1425.80812993586 61.68 2 -1.6743987122154136 0.4270791029285682 1.0 ['ENSG00000112494|ENST00000230256|UNC93A', 'nc|ENSG00000112494|Q86WB7-2|UNC93A', 'UNC93A|p.H330Tfs*5|1|0.16|ENSG00000112494|chr6:167307788-167307788|C/-|frameshift_variant'] 101401 8778 SNDTFEIPL True PC9_epitope_Rep3 1034.4920408254197 1034.49094993586 38.718 2 -1.6744770609237487 0.42709367385615016 1.0 ['nc|ENSG00000150275|Q96QU1-6|PCDH15', 'ENSG00000150275|ENST00000644397|PCDH15', 'nc|ENSG00000150275|Q96QU1-4|PCDH15', 'nc|ENSG00000150275|Q96QU1-3|PCDH15', 'nc|ENSG00000150275|Q96QU1|PCDH15', 'PCDH15|p.G458Vfs*24|1|0.21|ENSG00000150275|chr10:54185201-54185201|C/-|frameshift_variant'] 80627 24225 PLPLKKKQKQ True PC9_epitope_Rep4 1206.78122740222 1206.77959490379 101.66 3 -1.674525635507597 0.42709367385615016 1.0 ['ENST00000250111.8_1_17:7560666-7560732:+|nuORF'] 107627 7271 TAHFARPAV True PC9_epitope_Rep4 968.5191990631198 968.51810993586 35.282 2 -1.674599127281678 0.42709367385615016 1.0 ['ENSG00000139182|ENST00000266546|CLSTN3', 'nc|ENSG00000139182|Q9BQT9-2|CLSTN3'] 32550 24552 GGTHPEDH True H1975_Epitope_Rep1 848.3412942708001 848.3401899358599 101.74 2 -1.6748154622461522 0.42709367385615016 1.0 ['ENSG00000008853|ENST00000251822|RHOBTB2', 'nc|ENSG00000008853|Q9BYZ6-3|RHOBTB2', 'nc|ENSG00000008853|Q9BYZ6-2|RHOBTB2'] 12145 7877 DIIYAGEKAQ True NCI_RA007_Epitope_Rep3 1106.5607890915799 1106.5596899358602 38.101 2 -1.674872829648312 0.42709531866892275 1.0 ['ENSG00000127884|ENST00000368547|ECHS1'] 10969 5718 DCLKKADWTP True PC9_epitope_Rep2 1175.5644945730298 1175.5633899358602 27.385 2 -1.6749414319470501 0.42709531866892275 1.0 ['nc|ENSG00000134461|Q6P6B7-2|ANKRD16', 'ENSG00000134461|ENST00000380094|ANKRD16'] 47982 20494 KAGGGAGGS True PC9_epitope_Rep1 660.3191022742401 660.31855496793 83.642 1 -1.6749958527157751 0.42710824346884446 1.0 ['ENSG00000142408|ENST00000270458|CACNG8'] 72722 9578 MYRRFLRPRYR True NCI_RA007_Epitope_Rep2 1612.8885035187598 1612.8868649037902 41.87 3 -1.675115846349506 0.42710824346884446 1.0 ['ENSG00000138080|ENST00000380320|EMILIN1'] 45192 12276 IREYVRWMMYW True H1975_Epitope_Rep3 1631.7741104997897 1631.77300993586 52.397 2 -1.6751674579188514 0.427114705650119 1.0 ['ENSG00000168476|ENST00000306306|REEP4', 'nc|ENSG00000168476|Q9H6H4-2|REEP4', 'ENST00000519074.5_1_8:21996670-21998995:-|nuORF', 'ENST00000519875.1_1_8:21997686-21998995:-|nuORF'] 4398 22237 AISISRLQN True PC9_epitope_Rep4 1000.5665431783601 1000.56544993586 93.772 2 -1.6752164345288152 0.42711799406702233 1.0 ['SDK1|p.P1422Lfs*13|1|0.1|ENSG00000146555|chr7:4145758-4145759|CC/T|frameshift_variant', 'nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 83404 4277 QAVLPGLY True NCI_RA007_Epitope_Rep5 859.4803539429099 859.47924993586 23.03 2 -1.6753128374441473 0.42711799406702233 1.0 ['ENST00000506422.1_1_4:159593571-159624608:+|nuORF'] 121666 22293 VGLKFMQV True PC9_epitope_Rep2 920.51535955264 920.5148149679301 91.228 1 -1.6753758897079227 0.42711799406702233 1.0 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF'] 41882 9012 IDVVEGNRVY True H1975_Epitope_Rep2 1162.59823722946 1162.5971499358602 39.616 2 -1.6754179686922652 0.42711799406702233 1.0 ['ENSG00000185721|ENST00000331457|DRG1', 'ENST00000438989.1_1_2:20440064-20440208:-|nuORF'] 107336 8221 SYRNQPQA True H1975_Epitope_Rep3 962.45699272938 962.45588993586 36.605 2 -1.6754901386125687 0.42713737875028196 1.0 ['nc|ENSG00000080839|P28749-2|RBL1', 'ENSG00000080839|ENST00000373664|RBL1', 'PLCB1-RBL1|1|fusion', 'PLCB1-RBL1|2|fusion'] 121854 17595 VGNYVSELRF True PC9_epitope_Rep4 1182.6033226099 1182.6022299358601 75.693 2 -1.6755308311712462 0.42713737875028196 1.0 ['nc|ENSG00000088367|Q9H4G0-3|EPB41L1', 'nc|ENSG00000088367|Q9H4G0-4|EPB41L1', 'nc|ENSG00000088367|Q9H4G0-2|EPB41L1', 'ENSG00000088367|ENST00000338074|EPB41L1', 'EPB41L1-C20orf152|8|fusion', 'EPB41L1-C20orf152|2|fusion', 'EPB41L1-C20orf152|10|fusion', 'EPB41L1-C20orf152|7|fusion', 'EPB41L1-C20orf152|1|fusion', 'EPB41L1-C20orf152|12|fusion', 'EPB41L1-C20orf152|6|fusion', 'EPB41L1-C20orf152|4|fusion', 'EPB41L1-C20orf152|9|fusion', 'EPB41L1-C20orf152|11|fusion', 'EPB41L1-C20orf152|5|fusion', 'EPB41L1-C20orf152|3|fusion'] 33375 20766 GLERYLKEHRY True PC9_epitope_Rep2 1462.7680965192199 1462.76698993586 85.318 2 -1.675613399813015 0.42713737875028196 1.0 ['nc|ENSG00000165185|Q8N8K9-2|KIAA1958'] 61386 7800 LLELSEPAP True NCI_RA007_Epitope_Rep2 967.5226126777098 967.52150993586 34.968 2 -1.6757463531756944 0.42713902235456 1.0 ['ZNF236|p.C1724Wfs*46|1|0.31|ENSG00000130856|chr18:76959752-76959752|T/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'ZNF236|p.K993Sfs*28|1|0.16|ENSG00000130856|chr18:76913818-76913818|A/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36-2|ZNF236', 'ZNF236|p.M461Nfs*104|1|0.37|ENSG00000130856|chr18:76881473-76881474|-/A|frameshift_variant'] 66175 18536 LSPGVTRTTR True PC9_epitope_Rep4 1086.6145559999402 1086.6134499358602 79.373 2 -1.6757624009677639 0.42713902235456 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 64458 8626 LQTEGRQL True PC9_epitope_Rep4 943.5086939490698 943.50758993586 40.662 2 -1.6758550894285438 0.4271471268256922 1.0 ['ENST00000562590.5_1_16:28922190-28936514:-|nuORF', 'ENSG00000177548|ENST00000358201|RABEP2'] 80263 13732 PLDPVLQNPL True NCI_RA007_Epitope_Rep4 1104.61791004488 1104.6168099358601 60.044 2 -1.6758560126535706 0.4271471268256922 1.0 ['nc|ENSG00000173068|Q6ZN30-2|BNC2', 'ENSG00000173068|ENST00000380672|BNC2'] 48087 25816 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 107.09 3 -1.6758617626547785 0.4271471268256922 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 48135 25951 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 108.08 3 -1.6759612460218551 0.4271487701174056 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 104911 5373 STFQVFQE True NCI_RA007_Epitope_Rep5 984.4552613938798 984.45416993586 27.357 2 -1.675973129044894 0.4271487701174056 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 85126 6751 QISLVGAVDEE True PC9_epitope_Rep3 1158.5768330785397 1158.5757299358602 30.99 2 -1.6760318816820357 0.4271729691323913 1.0 ['ENSG00000081019|ENST00000261441|RSBN1', 'ENST00000476412.5_1_1:114308604-114340019:-|nuORF', 'ENST00000468035.1_1_7:77394853-77402638:+|nuORF', 'ENSG00000187257|ENST00000334955|RSBN1L', 'nc|ENSG00000187257|Q6PCB5-2|RSBN1L'] 134589 8214 WVYKHRLIYFG True NCI_RA007_Epitope_Rep2 1480.7979400955198 1480.79684993586 36.588 2 -1.676050202130317 0.4271729691323913 1.0 ['KLHDC1|p.D134H|1|0.52|ENSG00000197776|chr14:49710377-49710377|G/C|missense_variant'] 32306 19895 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 83.439 2 -1.676231969726351 0.42721326265929854 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 53009 25667 KRRKTSVF True PC9_epitope_Rep1 1020.6192474575599 1020.61814993586 103.76 2 -1.6763514849559509 0.42721490436665466 1.0 ['ENST00000539976.1_1_16:89981432-89981549:+|nuORF'] 21928 9904 ESHSQKSLFP True H1975_Epitope_Rep3 1158.56693710118 1158.5658499358601 43.127 2 -1.6763810587555357 0.42721490436665466 1.0 ['ENST00000372336.3_1_10:81145469-81145733:-|nuORF'] 90916 8656 RLEFLPRESV True PC9_epitope_Rep4 1244.6877209402 1244.68606490379 40.786 3 -1.67643614783803 0.4272262880727117 1.0 ['ENST00000444836.5_1_1:12072009-12072201:+|nuORF'] 18200 26530 EIQWWFLR True PC9_epitope_Rep5 1176.6080140675197 1176.60637490379 108.05 3 -1.676471950941763 0.4272262880727117 1.0 ['nc|ENSG00000170419|Q8TAG5|VSTM2A', 'ENSG00000170419|ENST00000402613|VSTM2A', 'nc|ENSG00000170419|Q8TAG5-2|VSTM2A'] 139131 15458 YSQETYSSTPK True PC9_epitope_Rep5 1289.57756135453 1289.5764699358601 64.47 2 -1.676562539345142 0.4272262880727117 1.0 ['nc|ENSG00000188916|Q6ZSG2-2|INSYN2A', 'ENSG00000188916|ENST00000522781|INSYN2A'] 8763 5596 AVEEYVYDFRD True NCI_RA007_Epitope_Rep3 1404.6197605196796 1404.61866993586 29.005 2 -1.6766013310092898 0.4272262880727117 1.0 ['ENSG00000164070|ENST00000296464|HSPA4L'] 13440 6712 DNSLINQIENL True NCI_RA007_Epitope_Rep1 1271.63574493699 1271.6346499358601 30.117 2 -1.6766235151868025 0.4272262880727117 1.0 ['ENSG00000134013|ENST00000389131|LOXL2'] 5472 21368 AMDSPPAQAV True PC9_epitope_Rep2 985.4538814948899 985.45278993586 87.661 2 -1.67663732338836 0.4272262880727117 1.0 ['ENST00000508802.5_1_4:37892746-37892950:+|nuORF'] 55309 5900 LARQELTL True PC9_epitope_Rep2 942.5498304850599 942.54872993586 28.09 2 -1.676645835000837 0.4272262880727117 1.0 ['ENST00000318602.11_1_12:9268543-9268723:-|nuORF'] 120656 6900 VGALRALH True NCI_RA007_Epitope_Rep4 835.50282072299 835.50172993586 33.158 2 -1.6766884089565703 0.4272327469553451 1.0 ['ENST00000605573.1_1_3:187871072-187871573:-|nuORF'] 114952 20879 TTHEVIHT True NCI_RA007_Epitope_Rep5 936.46649478392 936.46538993586 87.308 2 -1.676762162912268 0.4272392056923129 1.0 ['nc|ENSG00000105750|Q03923-2|ZNF85', 'ENSG00000105750|ENST00000328178|ZNF85'] 114672 23365 TSRKLGNGTVD True PC9_epitope_Rep5 1146.5992998586198 1146.59764490379 94.858 3 -1.6768537641080399 0.4272408466109626 1.0 ['ENST00000316491.13_1_16:31724569-31734591:+|nuORF'] 12362 8797 DIYLDDLKG True PC9_epitope_Rep5 1050.5233409537 1050.5222499358601 38.78 2 -1.6769239649908785 0.4272408466109626 1.0 ['LPIN2|p.G481Efs*25|1|0.17|ENSG00000101577|chr18:2931270-2931270|C/-|frameshift_variant', 'ENSG00000101577|ENST00000677752|LPIN2'] 70137 10594 LYKQLKHR True H1975_Epitope_Rep1 1084.6505475858398 1084.64944993586 45.703 2 -1.6770500909627744 0.4272424874556013 1.0 ['ENSG00000213341|ENST00000370397|CHUK'] 95897 7202 SDTAPLFQ True NCI_RA007_Epitope_Rep1 877.4181476091701 877.4175949679301 32.004 1 -1.6770838776737251 0.4272424874556013 1.0 ['ENSG00000116406|ENST00000318130|EDEM3', 'nc|ENSG00000116406|Q9BZQ6-2|EDEM3'] 13547 13278 DPKYATPQV True H1975_Epitope_Rep1 1017.5131106231698 1017.51257496793 56.175 1 -1.6771349132795288 0.4272441282262338 1.0 ['nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'ENSG00000061938|ENST00000672887|TNK2', 'ENST00000420716.2_1_3:195591054-195595875:-|nuORF'] 112247 18572 TLYKLHDRL True PC9_epitope_Rep1 1157.6556925359298 1157.65458993586 76.224 2 -1.677197233780434 0.4272441282262338 1.0 ['ENSG00000174106|ENST00000308330|LEMD3', 'LEMD3-MSRB3|2|fusion', 'LEMD3-MSRB3|1|fusion'] 39078 18688 HKYLWWKKYLT True PC9_epitope_Rep5 1564.8554549716398 1564.85434993586 76.903 2 -1.6772839729661524 0.42724751403639316 1.0 ['ENSG00000197977|ENST00000354666|ELOVL2'] 49362 25279 KIGFHLSHKV True PC9_epitope_Rep2 1164.67676233368 1164.67566993586 102.91 2 -1.6774275895794857 0.42724751403639316 1.0 ['nc|ENSG00000066230|P48764-2|SLC9A3', 'ENSG00000066230|ENST00000264938|SLC9A3'] 89885 27711 RFPRYLYKKM True PC9_epitope_Rep3 1400.7750964759596 1400.77398993586 114.59 2 -1.6774585473556625 0.42724751403639316 1.0 ['ENSG00000188032|ENST00000548523|C19orf67'] 136130 23060 YGGKAAPAA True PC9_epitope_Rep6 804.4130026590799 804.4124549679301 101.8 1 -1.6774884522597953 0.42724751403639316 1.0 ['ENSG00000172216|ENST00000303004|CEBPB', 'nc|ENSG00000172216|P17676-2|CEBPB'] 130769 25018 VVDTVLAL True PC9_epitope_Rep5 828.4956696538799 828.49456993586 101.38 2 -1.6775497538394883 0.42724751403639316 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 140928 17836 YYYRDRDWRWV True H1975_Epitope_Rep1 1676.7848092125198 1676.78370993586 74.277 2 -1.6776401451355747 0.42724751403639316 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 68944 26425 LVFRKPRGLFI True PC9_epitope_Rep5 1344.8394109846797 1344.83776490379 107.55 3 -1.6777028840712094 0.42724751403639316 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 23225 15731 EVQRIRHEFRD True NCI_RA007_Epitope_Rep1 1483.7644081211095 1483.7633099358602 65.285 2 -1.6779268816254798 0.42724751403639316 1.0 ['nc|ENSG00000177595|Q9HB75-3|PIDD1', 'nc|ENSG00000177595|Q9HB75-2|PIDD1', 'ENSG00000177595|ENST00000347755|PIDD1', 'nc|ENSG00000177595|Q9HB75-4|PIDD1', 'ENST00000524486.5_1_11:799309-803120:-|nuORF'] 9207 23934 AVPHQQRNKGG True PC9_epitope_Rep1 1190.62685201914 1190.62574993586 96.866 2 -1.6779335497854546 0.42724751403639316 1.0 ['L1PA2_dup1045|chr3:187890221-187896214:+|1.4826481700335392|0.0698587312945281|4.41|463.0|117|3|sense'] 89248 5627 REKQPMVPES True NCI_RA007_Epitope_Rep2 1199.5968573304697 1199.59576993586 26.501 2 -1.6779965229993028 0.42724751403639316 1.0 ['ENSG00000166508|ENST00000303887|MCM7', 'nc|ENSG00000166508|P33993-3|MCM7'] 83391 23474 QASRRRRRR True NCI_RA007_Epitope_Rep4 1240.7449505195598 1240.74384993586 101.87 2 -1.6779965888569175 0.42724751403639316 1.0 ['ENST00000264079.10_1_19:7595197-7598755:+|nuORF'] 48866 9778 KESQVDELNIW True NCI_RA007_Epitope_Rep2 1359.6670450652698 1359.66594993586 42.656 2 -1.678096943469058 0.427271702367531 1.0 ['ENST00000392830.6_1_12:107372543-107378973:-|nuORF', 'ENST00000550736.1_3_12:107374479-107378973:-|nuORF', 'ENST00000550496.1_3_12:107372533-107378973:-|nuORF'] 49405 17588 KILGKVYLSYV True NCI_RA007_Epitope_Rep5 1281.7696596590101 1281.7680149037901 74.434 3 -1.678123236727166 0.427271702367531 1.0 ['ENST00000298281.8_1_11:82872486-82874784:+|nuORF'] 23848 9938 EYLSQRLP True H1975_Epitope_Rep2 1004.5290950404799 1004.52798993586 43.215 2 -1.6782208084792896 0.42727979887940654 1.0 ['USP32|p.R660Pfs*31|1|0.61|ENSG00000170832|chr17:60214663-60214663|C/-|frameshift_variant'] 127418 13775 VQRKKCRI True H1975_Epitope_Rep3 1029.6229529390098 1029.6218499358602 58.288 2 -1.6782255482120427 0.42727979887940654 1.0 ['ENSG00000262655|ENST00000576479|SPON1'] 63617 23378 LPLSLLKTA True PC9_epitope_Rep6 954.61136811246 954.61026993586 103.03 2 -1.6782329327330805 0.42727979887940654 1.0 ['ENSG00000130520|ENST00000593829|LSM4', 'ENST00000593564.2_1_19:18423080-18433830:-|nuORF'] 65327 12359 LSELGWLHN True H1975_Epitope_Rep3 1067.53999407735 1067.53947496793 52.726 1 -1.6782780823929617 0.42728143847584693 1.0 ['ENSG00000126216|ENST00000261965|TUBGCP3', 'nc|ENSG00000126216|Q96CW5-3|TUBGCP3', 'nc|ENSG00000126216|Q96CW5-2|TUBGCP3'] 79906 18364 PINFKVKTV True PC9_epitope_Rep6 1044.6331661862 1044.63206993586 83.282 2 -1.6783143203348923 0.42728143847584693 1.0 ['ENSG00000152818|ENST00000367545|UTRN', 'nc|ENSG00000152818|P46939-2|UTRN', 'nc|ENSG00000152818|P46939-4|UTRN'] 122640 19246 VGTNGGLK True PC9_epitope_Rep6 744.41300265908 744.4124549679301 86.68 1 -1.6783627941518564 0.42728789484364077 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 71699 22502 MMCRAAKA True NCI_RA007_Epitope_Rep5 880.4081346861199 880.40702993586 93.733 2 -1.6784483729191728 0.42730080714253504 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B'] 15702 6314 EDAERREREER True H1975_Epitope_Rep1 1473.6920310264902 1473.6909299358601 29.353 2 -1.6784681705379327 0.42730080714253504 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 10986 2119 DDDDDNSQ True NCI_RA007_Epitope_Rep2 922.2788131535401 922.27770993586 11.569 2 -1.6785596128125666 0.42732017449921655 1.0 ['CON__P31096'] 2943 7469 AFGLPAPP True NCI_RA007_Epitope_Rep5 768.41702541036 768.41592993586 35.411 2 -1.6785617022159942 0.42732017449921655 1.0 ['ENST00000522770.1_1_8:86019758-86019872:+|nuORF'] 107592 9562 TAFRSITAQP True NCI_RA007_Epitope_Rep3 1090.5771078620598 1090.5760099358602 44.697 2 -1.6785837321864054 0.42732017449921655 1.0 ['ENST00000605810.1_1_3:70174691-70175321:-|nuORF'] 10003 10893 AYTASSHAV True PC9_epitope_Rep5 905.42429561877 905.42318993586 46.888 2 -1.678736059389689 0.42732181303754807 1.0 ['ENST00000469076.5_1_1:19638824-19651237:+|nuORF'] 123768 9024 VISKATPALP True NCI_RA007_Epitope_Rep2 995.6015317047498 995.60042993586 39.702 2 -1.6787403895182067 0.42732181303754807 1.0 ['ENSG00000135905|ENST00000258390|DOCK10', 'nc|ENSG00000135905|Q96BY6-3|DOCK10'] 87912 14238 QVNGHGGQ True NCI_RA007_Epitope_Rep5 795.3623640685498 795.36126993586 61.458 2 -1.6788351636771057 0.427373357080055 1.0 ['ENSG00000146247|ENST00000275034|PHIP', 'ENST00000479165.1_1_6:79650412-79665440:-|nuORF'] 32152 23291 GFCPAVLC True H1975_Epitope_Rep2 808.3611674103599 808.36006993586 96.057 2 -1.678873909154374 0.42737981175674916 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 79615 19114 PGYPGEPL True PC9_epitope_Rep3 828.40176926904 828.40066993586 78.745 2 -1.6789089152381258 0.42738626628793003 1.0 ['nc|ENSG00000181409|Q6ZMQ8-2|AATK', 'nc|ENSG00000181409|Q6ZMQ8-3|AATK', 'ENSG00000181409|ENST00000326724|AATK'] 138722 16124 YRYCYLNWDHY True H1975_Epitope_Rep2 1594.66633387262 1594.66522993586 67.234 2 -1.6790119743988785 0.4273991749137717 1.0 ['nc|ENSG00000163354|Q5T1A1-2|DCST2', 'ENSG00000163354|ENST00000368424|DCST2'] 107337 20973 SYRQPIII True PC9_epitope_Rep2 988.5705659296398 988.56946993586 86.123 2 -1.679032890652463 0.4273991749137717 1.0 ['nc|ENSG00000173262|Q8TDB8-4|SLC2A14', 'ENSG00000059804|ENST00000075120|SLC2A3', 'ENSG00000173262|ENST00000431042|SLC2A14', 'nc|ENSG00000173262|Q8TDB8|SLC2A14', 'nc|ENSG00000173262|Q8TDB8-5|SLC2A14', 'ENST00000495813.5_1_12:8082264-8082456:-|nuORF', 'ENST00000490763.1_1_12:8078421-8082456:-|nuORF'] 97493 11392 SGPGGGGK True H1975_Epitope_Rep3 615.29763855367 615.2970949679301 48.933 1 -1.679073170420739 0.4274169005511784 1.0 ['ENSG00000065717|ENST00000262953|TLE2', 'nc|ENSG00000065717|Q04725-3|TLE2', 'nc|ENSG00000065717|Q04725-2|TLE2'] 19655 23716 ELRTRSAKKRR True PC9_epitope_Rep1 1399.8484125285897 1399.84730993586 96.017 2 -1.6792464008227133 0.42742980804995434 1.0 ['ENSG00000140534|ENST00000268138|TICRR', 'nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'chr15:89601976-89602796|489|10.41|0.49|4.41|+|1|TICRR,TICRR|1'] 84332 24878 QFPRALGL True NCI_RA007_Epitope_Rep1 900.5181364339597 900.51702993586 102.97 2 -1.6792990689202578 0.42742980804995434 1.0 ['ENSG00000170190|ENST00000329783|SLC16A5', 'nc|ENSG00000170190|O15375-2|SLC16A5', 'SLC16A5|p.D360E|1|0.21|ENSG00000170190|chr17:75100743-75100743|T/A|missense_variant'] 124302 16850 VLDKLRSV True PC9_epitope_Rep4 928.57056592964 928.56946993586 72.795 2 -1.6793668932219532 0.4274362615811185 1.0 ['nc|ENSG00000100722|Q6PJT7-10|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-4|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-3|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-11|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-5|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-9|ZC3H14', 'nc|ENSG00000100722|Q6PJT7-2|ZC3H14', 'ENSG00000100722|ENST00000251038|ZC3H14'] 26968 14512 FLKGHKRK True PC9_epitope_Rep4 1012.6294182184399 1012.62832993586 63.734 2 -1.6795612652910394 0.4274604391145575 1.0 ['ZNF536|p.M364K|1|0.3|ENSG00000198597|chr19:30444653-30444653|T/A|missense_variant'] 86869 17315 QRRAENLKRR True NCI_RA007_Epitope_Rep4 1325.7752475883296 1325.7741499358601 74.983 2 -1.6796033228058342 0.4274604391145575 1.0 ['nc|ENSG00000110104|Q9H6F5-2|CCDC86', 'ENSG00000110104|ENST00000227520|CCDC86'] 28351 19217 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 80.782 2 -1.6796397389435884 0.4274668920822767 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 87244 9401 QSRELLRCLEE True NCI_RA007_Epitope_Rep2 1374.6925486204598 1374.6914499358602 41.176 2 -1.6797435453384504 0.42748461555801004 1.0 ['ENST00000585968.5_1_19:36103696-36110661:+|nuORF', 'ENSG00000249115|ENST00000203166|HAUS5', 'ENST00000587439.5_1_19:36108795-36110661:+|nuORF'] 111354 13641 TLIIQVMLVYF True NCI_RA007_Epitope_Rep2 1338.7621317504197 1338.76102993586 57.699 2 -1.6799660354241737 0.42752006131097287 1.0 ['ENST00000400151.6_1_4:728053-728236:+|nuORF'] 81452 15627 PQKRTKRKGR True NCI_RA007_Epitope_Rep5 1253.7792703396099 1253.7781699358602 66.818 2 -1.6800106059198872 0.42752006131097287 1.0 ['ENSG00000248905|ENST00000616417|FMN1', 'nc|ENSG00000248905|Q68DA7-2|FMN1'] 34444 9199 GQALGDVP True NCI_RA007_Epitope_Rep5 755.38136817763 755.3808149679301 42.035 1 -1.6801172839322607 0.4275555054660205 1.0 ['ENST00000243776.10_1_2:220403873-220403954:-|nuORF'] 48724 17911 KENLGWQKL True PC9_epitope_Rep1 1114.61349337078 1114.6123899358602 73.686 2 -1.6801316359677816 0.4275555054660205 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 55536 14901 LAWVPEAQR True PC9_epitope_Rep5 1068.5716285587998 1068.5705299358601 62.32 2 -1.6801477005192973 0.4275571383491863 1.0 ['ENSG00000011332|ENST00000355526|DPF1', 'nc|ENSG00000011332|Q92782-1|DPF1', 'nc|ENSG00000011332|Q92782-3|DPF1'] 107514 7625 TAAPTNRQI True PC9_epitope_Rep2 970.5195929859399 970.51848993586 34.701 2 -1.6801536280599267 0.4275571383491863 1.0 ['nc|ENSG00000030066|Q12769|NUP160', 'ENSG00000030066|ENST00000378460|NUP160'] 43977 23709 ILGKIILFLP True PC9_epitope_Rep6 1125.75255304289 1125.75091490379 104.37 3 -1.6802129487870268 0.427586129174039 1.0 ['ENSG00000157214|ENST00000394621|STEAP2'] 128041 23300 VRRKFWRLGR True PC9_epitope_Rep6 1372.8316402656399 1372.83054993586 102.72 2 -1.680362326285504 0.4276038497081164 1.0 ['ENST00000598903.5_2_10:109800211-109800896:-|nuORF'] 75616 20485 NQSDHTST True NCI_RA007_Epitope_Rep4 888.3573382577601 888.35624993586 88.706 2 -1.680575238931551 0.4276441088634699 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 25660 23450 FFALPAIIP True PC9_epitope_Rep2 987.5793397081899 987.5787949679301 95.671 1 -1.6807385133477628 0.42765218959183215 1.0 ['KCNQ5-AMPH|1|fusion'] 124008 25965 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 107.43 1 -1.6808921430932053 0.42765218959183215 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 137754 12464 YNLYIVENPHY True PC9_epitope_Rep4 1423.6772158261501 1423.67610993586 55.749 2 -1.6810173432352653 0.42765218959183215 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 79305 25310 PGKHHRRR True PC9_epitope_Rep2 1042.60091205482 1042.59980993586 103.03 2 -1.6812014467577479 0.42766990838301083 1.0 ['ENST00000315150.9_1_3:128813878-128840609:-|nuORF'] 82555 8872 PVGLPGRPGT True PC9_epitope_Rep3 949.53451477409 949.53340993586 39.077 2 -1.681247233882568 0.42767153852221634 1.0 ['ENST00000309957.2_2_13:111289482-111290624:+|nuORF'] 3913 8774 AHDEFPMLP True PC9_epitope_Rep2 1055.47461693947 1055.4735099358602 39.104 2 -1.68128869824449 0.42767153852221634 1.0 ['nc|ENSG00000163554|P02549-2|SPTA1', 'ENSG00000163554|ENST00000643759|SPTA1', 'SPTA1|p.A2365Gfs*44|3|0.14|ENSG00000163554|chr1:158612859-158612860|-/A|frameshift_variant', 'SPTA1|p.S1181Rfs*59|1|0.24|ENSG00000163554|chr1:158649882-158649882|A/-|frameshift_variant', 'SPTA1|p.R1164Afs*76|1|0.26|ENSG00000163554|chr1:158649935-158649935|G/-|frameshift_variant', 'SPTA1|p.H1183Mfs*57|1|0.25|ENSG00000163554|chr1:158649878-158649878|G/-|frameshift_variant', 'SPTA1|p.D1665Tfs*2|1|0.27|ENSG00000163554|chr1:158638229-158638229|C/-|frameshift_variant', 'SPTA1|p.V1843Sfs*9|2|0.42|ENSG00000163554|chr1:158634582-158634582|A/-|frameshift_variant'] 71241 15270 MGAHLVVF True NCI_RA007_Epitope_Rep3 872.45784467652 872.45674993586 67.612 2 -1.6813880193015087 0.42767316858794496 1.0 ['ENSG00000205846|ENST00000382073|CLEC6A', 'nc|ENSG00000205846|Q6EIG7-2|CLEC6A', 'CLEC6A|p.W164Cfs*3|1|0.29|ENSG00000205846|chr12:8477325-8477325|G/-|frameshift_variant'] 104076 20527 SRTVRNKFLLF True NCI_RA007_Epitope_Rep2 1379.8037537519497 1379.80264993586 84.918 2 -1.6814254767326746 0.42767316858794496 1.0 ['chr21:17917400-18027869|121|12.26|0.02|9.1|+|1|TE_info:MLT1A0,MLT1A0_dup20031,ERVL-MaLR,LTR,acceptor,+,18027869,18028046|CHODL,None|3'] 78863 2833 PESLPATK True PC9_epitope_Rep1 841.45453311789 841.45342993586 15.474 2 -1.681583738536571 0.42772170151405914 1.0 ['ENSG00000107554|ENST00000324109|DNMBP', 'nc|ENSG00000107554|Q6XZF7-2|DNMBP'] 71265 13976 MGPPIVLPPAR True H1975_Epitope_Rep1 1146.65833538822 1146.65668490379 58.917 3 -1.681643507138514 0.42772170151405914 1.0 ['SNRPN|p.G204V|1|0.17|ENSG00000128739|chr15:24978244-24978244|G/T|missense_variant'] 43116 7640 IGNINRAL True PC9_epitope_Rep4 869.5083000262499 869.50720993586 36.768 2 -1.68168752441744 0.42772170151405914 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2', 'ENST00000511524.1_1_3:139654198-140275504:+|nuORF'] 48102 24952 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 102.55 3 -1.6818436489687263 0.42772170151405914 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 18094 11963 EIKWIDFIR True PC9_epitope_Rep1 1218.67609362734 1218.6749899358601 50.881 2 -1.681851090463374 0.42772170151405914 1.0 ['ENST00000438469.2_1_1:146553889-146554591:-|nuORF'] 124009 26094 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 107.95 1 -1.6818632043361201 0.42772170151405914 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 76023 19449 NRKEHKLKK True H1975_Epitope_Rep2 1179.72002412799 1179.71836490379 80.716 3 -1.6818971439096988 0.42772170151405914 1.0 ['nc|ENSG00000050438|Q2Y0W8-4|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-5|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-3|SLC4A8', 'ENST00000319957.10_1_12:51818771-51890959:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-2|SLC4A8', 'ENSG00000050438|ENST00000453097|SLC4A8', 'DAPP1-SLC4A4|1|fusion', 'DAPP1-SLC4A4|2|fusion', 'ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'SLC4A7|p.G1175Efs*11|1|0.32|ENSG00000033867|chr3:27383192-27383192|C/-|frameshift_variant', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7', 'nc|ENSG00000144290|Q6U841-2|SLC4A10', 'nc|ENSG00000144290|Q6U841-3|SLC4A10', 'ENSG00000144290|ENST00000446997|SLC4A10', 'ENST00000446228.5_1_2:162758621-162834241:+|nuORF', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'SLC4A4|p.K1022Rfs*37|1|0.14|ENSG00000080493|chr4:71560215-71560215|G/-|frameshift_variant', 'ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4'] 84919 24677 QHTKAIEL True PC9_epitope_Rep4 938.5185303567798 938.51742993586 103.41 2 -1.6819461564755407 0.42772170151405914 1.0 ['ENSG00000174780|ENST00000642900|SRP72', 'nc|ENSG00000174780|O76094-2|SRP72', 'ENST00000344851.4_1_6:158659196-158659322:-|nuORF'] 93976 21911 RVPCLIPP True PC9_epitope_Rep3 893.5156939058099 893.51458993586 89.581 2 -1.6819637853541975 0.42772170151405914 1.0 ['ENST00000583167.5_1_17:45892556-45892844:-|nuORF'] 124873 22004 VLLLNYTCSTV True H1975_Epitope_Rep2 1224.6424105405601 1224.64075490379 90.964 3 -1.6820356345099567 0.42772170151405914 1.0 ['ENST00000349841.9_1_3:169505567-169505981:+|nuORF'] 23047 12249 EVKQEFPREGW True NCI_RA007_Epitope_Rep5 1403.6833638357498 1403.6822699358602 53.765 2 -1.6821086761392263 0.42772170151405914 1.0 ['GK|p.I43V|1|0.28|ENSG00000198814|chrX:30665559-30665559|A/G|missense_variant'] 7415 16421 ASASIPFH True PC9_epitope_Rep3 828.4130026590801 828.4124549679301 68.299 1 -1.6821517045563747 0.42772170151405914 1.0 ['PCDHA9|p.R623H|1|0.07|ENSG00000204961|chr5:140850363-140850363|G/A|missense_variant'] 44588 5988 IPGGNQRFLE True NCI_RA007_Epitope_Rep5 1129.58800689893 1129.5869099358601 29.717 2 -1.6822444668549428 0.42772170151405914 1.0 ['ENSG00000177311|ENST00000321464|ZBTB38'] 122675 5806 VGTRGPYD True PC9_epitope_Rep2 863.4137309350699 863.41262993586 27.728 2 -1.682330816071966 0.42772170151405914 1.0 ['nc|ENSG00000162398|Q3ZCV2-2|CIMAP2', 'ENSG00000162398|ENST00000371273|LEXM'] 70359 5619 LYPWECFVF True PC9_epitope_Rep1 1202.5470536037399 1202.54539490379 26.439 3 -1.6823513627616964 0.42772170151405914 1.0 ['nc|ENSG00000244687|Q13404-1|UBE2V1', 'nc|ENSG00000240849|A5PLL7-2|PEDS1', 'ENST00000453505.6_1_20:48741597-48767785:-|nuORF', 'ENSG00000240849|ENST00000371652|PEDS1'] 7792 8437 ASVSRSYLQSL True NCI_RA007_Epitope_Rep5 1209.63535101417 1209.63424993586 39.133 2 -1.6823951516515379 0.42772170151405914 1.0 ['nc|ENSG00000187908|Q9UGM3-4|DMBT1', 'nc|ENSG00000187908|Q9UGM3-8|DMBT1', 'nc|ENSG00000187908|Q9UGM3-2|DMBT1', 'nc|ENSG00000187908|Q9UGM3-5|DMBT1', 'nc|ENSG00000187908|Q9UGM3-3|DMBT1', 'nc|ENSG00000187908|Q9UGM3|DMBT1', 'nc|ENSG00000187908|Q9UGM3-7|DMBT1', 'ENSG00000187908|ENST00000338354|DMBT1', 'nc|ENSG00000187908|Q9UGM3-9|DMBT1'] 34414 7450 GPWGLQLPSNM True PC9_epitope_Rep6 1198.5804789903398 1198.57882490379 37.89 3 -1.6824832489436163 0.42772170151405914 1.0 ['ENST00000600603.5_2_19:50363860-50363989:+|nuORF', 'ENST00000601612.5_1_19:50363535-50363989:+|nuORF'] 72975 3668 NCSLPLVL True PC9_epitope_Rep5 857.46807500705 857.46696993586 19.197 2 -1.6825014310751063 0.42772170151405914 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G', 'PIK3C2G|p.K900Rfs*29|1|0.36|ENSG00000139144|chr12:18491461-18491462|AG/-|frameshift_variant', 'PIK3C2G|p.G1094Efs*4|1|0.24|ENSG00000139144|chr12:18505418-18505418|G/-|frameshift_variant'] 13048 13738 DLRDTWEAL True PC9_epitope_Rep3 1117.54038800017 1117.53928993586 57.926 2 -1.6825019181526528 0.42772170151405914 1.0 ['chr10:5282898-5283710|413|27.09|0.52|5.72|-|0|AKR1C7P,AKR1C7P|1'] 124010 26186 VKLGPALK True NCI_RA007_Epitope_Rep5 824.5483739330799 824.5478249679301 108.31 1 -1.6825354775042922 0.42772170151405914 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1'] 60731 25880 LKAKKPQKRKP True PC9_epitope_Rep4 1320.8717737421198 1320.8701349037901 109.24 3 -1.6827210368190095 0.42772170151405914 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 108021 10039 TDDRAGHLRL True H1975_Epitope_Rep3 1152.59996856496 1152.5988699358602 43.651 2 -1.682721866913824 0.42772170151405914 1.0 ['ENST00000504424.1_1_5:141392338-141392542:-|nuORF'] 63196 16277 LNVKGKRTL True PC9_epitope_Rep5 1027.6502132326698 1027.64910993586 67.603 2 -1.6827450010411813 0.42772170151405914 1.0 ['ENSG00000102174|ENST00000379374|PHEX'] 4982 20555 ALKDPTLAP True PC9_epitope_Rep2 924.5280324113199 924.52692993586 84.499 2 -1.682803100212841 0.42772170151405914 1.0 ['NTRK3|p.A581P|1|0.39|ENSG00000140538|chr15:87933160-87933160|C/G|missense_variant'] 85195 1009 QKENLRKFY True PC9_epitope_Rep5 1224.6615061923599 1224.6604099358601 5.5972 2 -1.6828567187557468 0.42772170151405914 1.0 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 126207 22443 VPGRGNKK True PC9_epitope_Rep5 854.50863437942 854.50752993586 91.327 2 -1.6830078328569824 0.42772814834007367 1.0 ['MAPT|p.G758R|2|0.22|ENSG00000186868|chr17:46018716-46018716|G/A|missense_variant'] 56455 8693 LDSSFRNEI True NCI_RA007_Epitope_Rep4 1079.52473793603 1079.52364993586 40.226 2 -1.683378367382275 0.427752306496491 1.0 ['nc|ENSG00000155052|Q8WYK1|CNTNAP5', 'ENSG00000155052|ENST00000682447|CNTNAP5'] 101051 16064 SLTNRCTPL True PC9_epitope_Rep1 1003.51206507735 1003.51096993586 66.606 2 -1.6833896646705662 0.427752306496491 1.0 ['MARCHF7|p.R391T|1|0.46|ENSG00000136536|chr2:159748462-159748462|G/C|missense_variant'] 1739 10746 AEGTARQPLPI True H1975_Epitope_Rep1 1151.6298717109098 1151.6287699358602 46.299 2 -1.6835268711761877 0.4277700175731086 1.0 ['ENST00000537670.5_1_15:66855926-66858216:-|nuORF'] 126372 18031 VPLDERIV True PC9_epitope_Rep5 939.5389314481899 939.53782993586 74.372 2 -1.6836119645473189 0.4277877282507069 1.0 ['nc|ENSG00000136830|Q96TA1-2|NIBAN2', 'ENSG00000136830|ENST00000373312|NIBAN2'] 19945 10344 ELYYIFATV True PC9_epitope_Rep5 1117.5695628701299 1117.56846993586 44.773 2 -1.6836232462886154 0.4277893551112363 1.0 ['ENSG00000100926|ENST00000261789|TM9SF1'] 12921 9648 DLNEDLAK True NCI_RA007_Epitope_Rep5 916.4501760134399 916.44962496793 43.749 1 -1.6837182145972034 0.4277893551112363 1.0 ['ENSG00000110002|ENST00000456829|VWA5A'] 80819 8716 PLTLLPAA True H1975_Epitope_Rep2 794.49019035062 794.48908993586 38.487 2 -1.6838461470073571 0.42781351025603476 1.0 ['ENSG00000116903|ENST00000366645|EXOC8'] 115788 25326 TVLVHLEIKVL True PC9_epitope_Rep3 1262.79620876002 1262.7951099358602 102.83 2 -1.6839437789918161 0.42781351025603476 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 77683 5079 PAAANVRK True PC9_epitope_Rep2 825.48208527841 825.48098993586 24.912 2 -1.684068474508695 0.4278328452354134 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ATXN2|p.A578Qfs*70|1|0.18|ENSG00000204842|chr12:111516277-111516277|C/-|frameshift_variant', 'ENST00000549455.1_1_12:111963110-112036838:-|nuORF'] 48013 21337 KAIWLFWGL True PC9_epitope_Rep4 1132.64333694708 1132.64222993586 90.24 2 -1.6841542597347687 0.4278328452354134 1.0 ['GRIN2A|p.L608F|1|0.19|ENSG00000183454|chr16:9829608-9829608|G/A|missense_variant'] 92213 8080 RQHVWLRH True PC9_epitope_Rep5 1130.62097879306 1130.61934490379 36.018 3 -1.6841969739718878 0.4278328452354134 1.0 ['ENST00000434140.5_2_3:46717393-46723043:-|nuORF'] 120621 22638 VGAGSLCQALL True PC9_epitope_Rep1 1030.5481162329 1030.5470099358602 91.883 2 -1.6843031260068315 0.42785055360944346 1.0 ['nc|ENSG00000148396|O15027-2|SEC16A', 'nc|ENSG00000148396|O15027-4|SEC16A', 'nc|ENSG00000148396|O15027-3|SEC16A', 'ENSG00000148396|ENST00000684901|SEC16A', 'nc|ENSG00000148396|O15027-5|SEC16A'] 60360 17660 LIHTRKKYY True NCI_RA007_Epitope_Rep1 1220.70297708152 1220.7018899358602 72.828 2 -1.6844866412492436 0.42785380413358115 1.0 ['nc|ENSG00000184617|A6NDX5|ZNF840P'] 114552 23847 TSILRKTTTV True PC9_epitope_Rep3 1118.66592286646 1118.66482993586 97.011 2 -1.6845188015902255 0.42785380413358115 1.0 ['CON__Q5XKE5', 'ENSG00000185640|ENST00000330553|KRT79', 'ENST00000546453.1_1_12:53215658-53224087:-|nuORF'] 139217 8075 YSVVLGSP True NCI_RA007_Epitope_Rep1 820.4330693973199 820.43196993586 35.408 2 -1.6845323863622819 0.42785380413358115 1.0 ['ENST00000377735.7_1_19:46286802-46287057:-|nuORF'] 61810 18641 LLKSRDEL True PC9_epitope_Rep1 972.5603951687599 972.55928993586 76.492 2 -1.684586976801148 0.42785380413358115 1.0 ['ENST00000357461.6_1_14:67937818-67938346:-|nuORF'] 97464 6666 SGHRCAAG True NCI_RA007_Epitope_Rep1 757.3289557652898 757.32784993586 29.94 2 -1.6847006151040216 0.4278602482373347 1.0 ['ENST00000304771.7_1_11:75378785-75379403:-|nuORF'] 55847 7038 LDFDEFIPP True H1975_Epitope_Rep3 1091.51752729727 1091.51642993586 32.036 2 -1.6847188348533577 0.4278666921959296 1.0 ['nc|ENSG00000104059|O60320-2|ENTREP2', 'ENSG00000104059|ENST00000261275|ENTREP2'] 128469 12040 VSETTERI True PC9_epitope_Rep1 933.4767251144499 933.47562993586 51.171 2 -1.6848112153250183 0.42787313600937066 1.0 ['CASP8AP2|p.S762R|1|0.34|ENSG00000118412|chr6:89863995-89863995|C/G|missense_variant'] 44564 17325 IPEEKVPVP True PC9_epitope_Rep6 1006.5698972232998 1006.56880993586 79.254 2 -1.6849502612209095 0.42789084233407293 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 131315 22570 VVQVRTRS True PC9_epitope_Rep4 943.55631284783 943.55520993586 95.053 2 -1.68501422733142 0.42789728573037505 1.0 ['ENSG00000153404|ENST00000637938|PLEKHG4B'] 81591 22550 PRLPRSTT True PC9_epitope_Rep4 926.5297637468201 926.52866993586 94.977 2 -1.6850776313154958 0.42790372898154094 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 126205 12098 VPGPLFKFFF True PC9_epitope_Rep6 1197.6586526580497 1197.65754993586 57.864 2 -1.6851904875123578 0.4279101720875755 1.0 ['ENSG00000184160|ENST00000330055|ADRA2C'] 71658 24790 MLSFPTPSW True PC9_epitope_Rep2 1064.50010341132 1064.4990099358602 101.04 2 -1.6852778299278321 0.42791661504848355 1.0 ['ENST00000274963.12_1_6:36988332-36988498:+|nuORF'] 130196 10422 VTSAARTEL True PC9_epitope_Rep1 946.5083595959 946.50726993586 44.975 2 -1.6853759086182183 0.4279230578642701 1.0 ['nc|ENSG00000185567|Q8IVF2-3|AHNAK2', 'ENSG00000185567|ENST00000333244|AHNAK2', 'nc|ENSG00000185567|Q8IVF2-2|AHNAK2'] 30281 19789 GAAPGWRW True PC9_epitope_Rep3 899.44022046643 899.43912993586 81.349 2 -1.6854917800596108 0.42792950053494005 1.0 ['ENST00000375640.7_1_6:31802385-31802835:+|nuORF'] 120987 5155 VGETLQPK True NCI_RA007_Epitope_Rep4 870.4810822188999 870.47998993586 26.352 2 -1.6855803325848777 0.42794720482904636 1.0 ['nc|ENSG00000166783|Q9Y4F3-4|MARF1', 'nc|ENSG00000166783|Q9Y4F3-3|MARF1', 'nc|ENSG00000166783|Q9Y4F3-5|MARF1', 'ENSG00000166783|ENST00000396368|MARF1'] 81566 23727 PRILKRPKKR True NCI_RA007_Epitope_Rep3 1290.8724424484599 1290.87079490379 102.86 3 -1.6856781999173471 0.427948827676299 1.0 ['nc|ENSG00000105993|O75190-4|DNAJB6'] 5117 5896 ALLYRHWIEIV True PC9_epitope_Rep5 1411.7976057423498 1411.79596490379 27.672 3 -1.6856782347448416 0.427948827676299 1.0 ['nc|ENSG00000115607|O95256-2|IL18RAP', 'ENSG00000115607|ENST00000687160|IL18RAP'] 36361 8107 GVHPAPGF True NCI_RA007_Epitope_Rep3 780.39187329168 780.39076993586 38.992 2 -1.6857884136695769 0.4279777925427088 1.0 ['ENSG00000180667|ENST00000315927|YOD1'] 125483 24200 VLVFIKKV True NCI_RA007_Epitope_Rep5 944.6422743179198 944.64172496793 100.49 1 -1.6859683795410656 0.4280292792792793 1.0 ['ENSG00000101017|ENST00000372285|CD40', 'CD40|p.A219S|1|0.17|ENSG00000101017|chr20:46128338-46128338|G/T|missense_variant'] 25556 20241 FERRRKRSR True NCI_RA007_Epitope_Rep2 1289.75411822093 1289.75248490379 83.765 3 -1.68602076526109 0.4280309002049503 1.0 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000517666.5_1_8:124333376-124408650:-|nuORF', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'nc|ENSG00000156802|Q6PL18-2|ATAD2'] 111926 7314 TLRWHTSPY True H1975_Epitope_Rep1 1159.57744221523 1159.5763499358602 33.14 2 -1.686097766613609 0.4280309002049503 1.0 ['ENST00000603037.2_2_X:73422686-73423058:-|nuORF'] 62537 6449 LLTEEEAALYI True H1975_Epitope_Rep1 1263.6598344265099 1263.65872993586 29.868 2 -1.6862384092300846 0.4280389617701706 1.0 ['ENSG00000174628|ENST00000695302|IQCK', 'ENST00000568300.6_1_16:19775348-19867867:+|nuORF', 'ENST00000568126.5_1_16:19775348-19800271:+|nuORF'] 26870 21761 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 90.819 2 -1.6862895966721327 0.4280389617701706 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 18982 20043 ELFYVKYRNL True PC9_epitope_Rep5 1343.7237720957498 1343.72266993586 82.149 2 -1.6865098786416945 0.4280389617701706 1.0 ['nc|ENSG00000124177|Q8TD26-2|CHD6'] 136693 13797 YIGLPRALP True H1975_Epitope_Rep3 998.5913013742199 998.59020993586 58.374 2 -1.6866195923259866 0.4280566628380965 1.0 ['ENSG00000174326|ENST00000574600|SLC16A11', 'nc|ENSG00000174326|Q8NCK7|SLC16A11'] 13586 6001 DPQDVGLPA True H1975_Epitope_Rep3 910.4396113297399 910.43850993586 28.095 2 -1.6867023516070498 0.428063103133762 1.0 ['ENST00000014935.7_2_X:153637859-153638210:-|nuORF', 'ENST00000432135.1_2_X:153637859-153640303:-|nuORF'] 42777 15098 IFHLFDKQL True NCI_RA007_Epitope_Rep1 1159.6389798426299 1159.6378899358601 62.795 2 -1.6867537405249888 0.4280711631573021 1.0 ['ENST00000510543.1_1_4:63683420-63684509:+|nuORF'] 17051 7005 EGPEGYNLFIY True H1975_Epitope_Rep3 1300.59756852312 1300.5964699358601 31.908 2 -1.6868709859380087 0.4280711631573021 1.0 ['CELF6|p.C396Y|1|0.3|ENSG00000140488|chr15:72288439-72288439|C/T|missense_variant'] 131216 25813 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 109.35 2 -1.686876133451964 0.4280711631573021 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 13144 15299 DLSSPGMT True H1975_Epitope_Rep1 806.3480194440201 806.3474749679301 64.116 1 -1.6870281975098622 0.4281113825990024 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'PHC2|p.G541_N542del|1|0.29|ENSG00000134686|chr1:33334222-33334227|GTTTCC/-|inframe_deletion', 'ENST00000493483.5_1_1:33799498-33815372:-|nuORF', 'ENST00000485928.5_1_1:33797943-33815375:-|nuORF'] 32307 20453 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 85.614 2 -1.6871324450478786 0.4281178219159573 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 137817 25274 YPEYLSNFP True PC9_epitope_Rep4 1128.51277627 1128.51112490379 106.01 3 -1.687166727003022 0.4281242610879038 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 130571 17657 VTYTNRYI True PC9_epitope_Rep6 1028.52909504048 1028.5279899358602 80.557 2 -1.6874027099014055 0.42813393681460965 1.0 ['ENSG00000087338|ENST00000282570|GMCL1'] 122405 19196 VGSGQAAVP True PC9_epitope_Rep6 784.40791727864 784.4073649679301 86.49 1 -1.6874846158630366 0.42813393681460965 1.0 ['ENST00000401950.6_1_22:30421796-30421910:+|nuORF'] 98996 12794 SKKSSKPP True PC9_epitope_Rep5 857.4970666362099 857.49596993586 54.223 2 -1.6875422006499403 0.42813393681460965 1.0 ['nc|ENSG00000084093|Q13127-4|REST', 'ENSG00000084093|ENST00000309042|REST'] 77944 19095 PAKQVSIHN True NCI_RA007_Epitope_Rep4 992.5403284305199 992.53977496793 82.598 1 -1.6875633341190805 0.42813393681460965 1.0 ['ENSG00000173250|ENST00000311104|GPR151'] 126662 13703 VPRADLIVM True PC9_epitope_Rep1 1012.5739370579199 1012.57282993586 57.559 2 -1.6875722057398932 0.42813393681460965 1.0 ['nc|ENSG00000188877|Q6S8J7-2|POTEA', 'nc|ENSG00000188877|Q6S8J7|POTEA'] 114311 15462 TSASKKGK True NCI_RA007_Epitope_Rep5 805.46576650793 805.46466993586 66.171 2 -1.6876383085228597 0.42813555505516776 1.0 ['nc|ENSG00000179981|Q6ZSZ6-2|TSHZ1', 'ENSG00000179981|ENST00000580243|TSHZ1'] 87267 21510 QSRRTFIKSV True PC9_epitope_Rep6 1220.69895433024 1220.6978499358602 95.612 2 -1.6876521582523303 0.42813555505516776 1.0 ['ENSG00000133048|ENST00000255409|CHI3L1', 'CHI3L1|p.P124L|2|0.26|ENSG00000133048|chr1:203183735-203183735|G/A|missense_variant'] 59309 6057 LGHRKQYG True PC9_epitope_Rep6 957.5144480358499 957.51334993586 31.671 2 -1.6878565154287895 0.42815004953616137 1.0 ['ENSG00000204361|ENST00000389586|NXPE2', 'nc|ENSG00000204361|Q96DL1-3|NXPE2'] 87235 4817 QSQKELEFMFK True PC9_epitope_Rep3 1413.6962370185695 1413.69460490379 23.625 3 -1.6878590065010863 0.42815004953616137 1.0 ['ENSG00000236279|ENST00000422142|CLEC2L'] 3143 12044 AGDSSSHR True H1975_Epitope_Rep1 815.3521933076701 815.35164496793 51.337 1 -1.6879069314552442 0.42815004953616137 1.0 ['ENSG00000104450|ENST00000388798|SPAG1'] 37831 2624 HDIPMIAQ True PC9_epitope_Rep2 923.4534875720699 923.45238993586 14.743 2 -1.688026476351628 0.42815004953616137 1.0 ['ENSG00000109771|ENST00000505916|LRP2BP', 'nc|ENSG00000109771|Q9P2M1-2|LRP2BP'] 14628 14344 DVLSGVVP True PC9_epitope_Rep2 784.43306939732 784.43196993586 60.437 2 -1.6881652657466761 0.42817900365887984 1.0 ['ENST00000209873.8_1_12:53715193-53715361:-|nuORF'] 37280 12793 GVVNVRLC True PC9_epitope_Rep5 858.4745573698199 858.47346993586 54.219 2 -1.6883679594507641 0.4282192150946795 1.0 ['ENSG00000083457|ENST00000263087|ITGAE'] 15876 4139 EDNFNNTYIST True NCI_RA007_Epitope_Rep2 1316.55207488268 1316.5509699358602 20.737 2 -1.6884079050713974 0.42824816778682157 1.0 ['ENST00000495720.5_1_1:153958496-153958682:-|nuORF', 'ENST00000462680.5_1_1:153955993-153958658:-|nuORF', 'ENSG00000143545|ENST00000368575|RAB13'] 58398 20768 LEVPEPYP True PC9_epitope_Rep1 942.46984882886 942.46930496793 84.712 1 -1.6885254128119918 0.4282658621155492 1.0 ['ENSG00000135451|ENST00000257909|TROAP'] 115931 23498 TVPLTVRVP True PC9_epitope_Rep1 980.6018660579199 980.60076993586 95.172 2 -1.6885399487307948 0.4282787346617134 1.0 ['ENST00000314103.5_1_21:37757715-37758383:+|nuORF'] 123741 10145 VIRGLMKFWP True H1975_Epitope_Rep1 1245.7056199338099 1245.7045299358601 43.961 2 -1.6886938240379104 0.4282787346617134 1.0 ['nc|ENSG00000154001|Q16537-3|PPP2R5E', 'nc|ENSG00000154001|Q16537-2|PPP2R5E', 'ENSG00000154001|ENST00000337537|PPP2R5E'] 120835 2708 VGDMWILF True PC9_epitope_Rep3 979.48372507119 979.48262993586 14.877 2 -1.6888451331356462 0.4283109134913041 1.0 ['ENSG00000204642|ENST00000259951|HLA-F'] 52573 24799 KPVQGGGL True PC9_epitope_Rep4 754.4337381036598 754.43264993586 103.89 2 -1.6888498315876357 0.4283109134913041 1.0 ['NCOA1|p.L960P|1|0.2|ENSG00000084676|chr2:24728469-24728469|T/C|missense_variant'] 41276 13350 IAGFPDPV True NCI_RA007_Epitope_Rep2 814.4225047136199 814.4219549679301 56.566 1 -1.688860138250983 0.4283109134913041 1.0 ['CON__Q2TBQ1'] 80412 24351 PLIYILQN True NCI_RA007_Epitope_Rep2 972.56441792004 972.56332993586 102.27 2 -1.6888643582799419 0.4283109134913041 1.0 ['OR11H1|p.S295I|1|0.2|ENSG00000130538|chr22:15529075-15529075|G/T|missense_variant'] 92609 19229 RREKLRQLMQE True H1975_Epitope_Rep1 1485.8198148222498 1485.8187099358602 80.126 2 -1.688904120143774 0.4283109134913041 1.0 ['ENSG00000139437|ENST00000405876|TCHP', 'ENST00000537218.1_1_12:110338138-110342619:+|nuORF'] 119364 5920 VENLDLQVQV True H1975_Epitope_Rep3 1155.6135529404298 1155.61244993586 27.78 2 -1.6891640347370525 0.42833986221801973 1.0 ['ENST00000560634.1_1_15:84858634-84860056:+|nuORF', 'ENST00000558229.1_15:82983798-82985220:-|nuORF'] 75541 10352 NQLGALVHQRT True PC9_epitope_Rep2 1235.67346785839 1235.6723699358602 45.144 2 -1.6893493664425605 0.4283575537219852 1.0 ['ENSG00000107164|ENST00000319725|FUBP3', 'nc|ENSG00000107164|Q96I24-2|FUBP3'] 45848 12912 ISQFRNDFRQY True H1975_Epitope_Rep3 1472.71606094636 1472.7149699358602 54.893 2 -1.6894446311574305 0.42836239208491383 1.0 ['ENST00000566049.5_1_16:19078961-19089477:+|nuORF'] 139001 14242 YSGDHLMLY True PC9_epitope_Rep5 1097.48518162317 1097.48408993586 59.787 2 -1.6894756517431813 0.42836239208491383 1.0 ['FAM91A1|p.R72G|1|0.84|ENSG00000176853|chr8:123775203-123775203|C/G|missense_variant'] 98493 8350 SILDRGVP True PC9_epitope_Rep1 855.4814165720699 855.48030993586 36.952 2 -1.6895464459923046 0.42836239208491383 1.0 ['ENST00000565348.5_1_16:30484158-30495228:+|nuORF'] 28171 20787 FRMWQKAHL True PC9_epitope_Rep4 1215.6335176227099 1215.63242993586 88.105 2 -1.6895618365350469 0.42836239208491383 1.0 ['ENSG00000111339|ENST00000228936|ART4'] 79609 18765 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 79.012 2 -1.689594421909834 0.42836239208491383 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 139713 10559 YTVRNKDVK True PC9_epitope_Rep1 1121.61930702721 1121.61820993586 45.506 2 -1.6896541181939688 0.42836239208491383 1.0 ['nc|ENSG00000176290|Q96R72|OR4K3'] 126194 22047 VPGKMKVA True PC9_epitope_Rep1 828.4891448047998 828.48804993586 89.619 2 -1.689930504977175 0.42844761604610326 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ENST00000585133.1_1_17:29162236-29196669:+|nuORF', 'nc|ENSG00000176208|Q96QE3-2|ATAD5'] 134138 9680 WRERWQEYFTF True H1975_Epitope_Rep3 1646.76301113878 1646.76190993586 42.253 2 -1.6899972276095752 0.428454049186786 1.0 ['ENST00000367103.3_1_1:206907394-206907589:+|nuORF'] 117666 11153 VAIYPYPLVL True PC9_epitope_Rep5 1146.66888298858 1146.66724490379 47.884 3 -1.6901240652885314 0.42846048218265315 1.0 ['ENSG00000168412|ENST00000307161|MTNR1A'] 87080 8130 QSELLLRE True H1975_Epitope_Rep3 986.53965972418 986.53856993586 36.248 2 -1.6902935797177943 0.4284733477399604 1.0 ['ENST00000321867.5_1_12:132405934-132406579:+|nuORF'] 63055 16157 LNKQANGLI True PC9_epitope_Rep4 969.5607295219299 969.56018496793 70.089 1 -1.6904685414890068 0.4284733477399604 1.0 ['nc|ENSG00000166436|O15016|TRIM66', 'ENSG00000166436|ENST00000646038|TRIM66', 'ENST00000531498.5_1_11:8665946-8673385:-|nuORF', 'nc|ENSG00000166436|O15016-3|TRIM66', 'ENST00000481014.6_1_11:8646046-8673385:-|nuORF', 'nc|ENSG00000166436|O15016-2|TRIM66'] 12351 16221 DIWRVNIQRKR True H1975_Epitope_Rep3 1482.85316355586 1482.85206993586 67.851 2 -1.6906708166619222 0.42847978030141026 1.0 ['ENSG00000188227|ENST00000627814|ZNF793', 'nc|ENSG00000188227|Q6ZN11-2|ZNF793'] 126311 18674 VPISPVSVG True PC9_epitope_Rep1 853.49091862661 853.49037496793 76.619 1 -1.6907699814991193 0.4285022958494643 1.0 ['ENST00000584908.5_1_17:37856482-37868536:+|nuORF'] 47149 15116 IWNTFFHERYL True PC9_epitope_Rep5 1524.7513838259201 1524.74917987172 63.149 4 -1.6909420469798238 0.4285022958494643 1.0 ['ATP6V0A4|p.G448E|1|0.18|ENSG00000105929|chr7:138745258-138745258|C/T|missense_variant'] 97377 6450 SGCACGCGCE True NCI_RA007_Epitope_Rep3 888.2234302612 888.22232993586 32.397 2 -1.6909422121884703 0.4285022958494643 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 12148 7644 DIKDNDRTL True PC9_epitope_Rep3 1088.5462016566 1088.5451099358602 34.403 2 -1.6909707109722352 0.4285022958494643 1.0 ['nc|ENSG00000135049|Q9UPW5-2|AGTPBP1', 'ENSG00000135049|ENST00000357081|AGTPBP1', 'nc|ENSG00000135049|Q9UPW5-3|AGTPBP1'] 22668 5151 ETSPRPGAP True H1975_Epitope_Rep3 910.4508447197799 910.44974993586 24.917 2 -1.6909980689215323 0.4285022958494643 1.0 ['ENST00000475722.5_1_1:150981012-150999718:+|nuORF', 'ENST00000368936.5_1_1:150981012-150997089:+|nuORF', 'ENST00000368935.1_1_1:150981012-150999711:+|nuORF', 'ENST00000431193.5_3_1:150981012-150998071:+|nuORF', 'ENST00000462440.5_1_1:150981012-150999718:+|nuORF'] 79167 12783 PGDQARSK True H1975_Epitope_Rep1 857.43552900881 857.4349849679301 54.233 1 -1.691018558104499 0.4285022958494643 1.0 ['ENSG00000165606|ENST00000374139|DRGX'] 43137 15873 IGPPGPIGPKG True PC9_epitope_Rep2 988.5705659296399 988.56946993586 66.312 2 -1.6911012047093115 0.4285022958494643 1.0 ['nc|ENSG00000169031|Q01955-5|COL4A3', 'nc|ENSG00000169031|Q01955-4|COL4A3', 'nc|ENSG00000169031|Q01955-3|COL4A3', 'nc|ENSG00000169031|Q01955-2|COL4A3', 'ENSG00000169031|ENST00000396578|COL4A3', 'ENST00000471862.1_1_2:228162448-228168961:+|nuORF'] 60844 21677 LKLFLPLMLQY True PC9_epitope_Rep6 1377.80941629601 1377.80776490379 96.265 3 -1.6912661947297287 0.42851515901775866 1.0 ['MED12L|p.L273F|1|0.34|ENSG00000144893|chr3:151158781-151158781|G/T|missense_variant'] 140458 22496 YYHISSSA True PC9_epitope_Rep6 926.4133965819 926.41228993586 99.53 2 -1.691320814598771 0.42851515901775866 1.0 ['nc|ENSG00000091128|A4D0S4-3|LAMB4', 'ENSG00000091128|ENST00000388781|LAMB4'] 52576 23582 KPVQGGGL True PC9_epitope_Rep6 754.4337381036598 754.43264993586 103.85 2 -1.691384081642547 0.4285296302131395 1.0 ['NCOA1|p.L960P|1|0.2|ENSG00000084676|chr2:24728469-24728469|T/C|missense_variant'] 18116 19241 EILQPLLEQGA True H1975_Epitope_Rep2 1209.66050313285 1209.65884490379 79.854 3 -1.69139093727757 0.4285296302131395 1.0 ['ENSG00000138722|ENST00000264790|MMRN1'] 86135 17862 QPRPTRQGR True PC9_epitope_Rep1 1094.6057226517398 1094.6046299358602 73.499 2 -1.6914099269740097 0.4285296302131395 1.0 ['ENSG00000106948|ENST00000374088|AKNA', 'nc|ENSG00000106948|Q7Z591-7|AKNA', 'nc|ENSG00000106948|Q7Z591-2|AKNA', 'AKNA|p.V368*|1|0.39|ENSG00000106948|chr9:114376705-114376705|C/-|frameshift_variant', 'nc|ENSG00000106948|Q7Z591-3|AKNA', 'ENST00000223791.7_2_9:117130488-117139135:-|nuORF', 'nc|ENSG00000106948|Q7Z591-6|AKNA'] 87256 18901 QSRLRDRALA True NCI_RA007_Epitope_Rep4 1184.67380221156 1184.6727099358602 81.728 2 -1.6914130686359907 0.4285296302131395 1.0 ['PRAMEF12|p.L17R|1|0.39|ENSG00000116726|chr1:12774917-12774917|T/G|missense_variant'] 119560 8659 VERFRYGW True PC9_epitope_Rep6 1111.5563128478298 1111.5552099358601 43.142 2 -1.6915916771044432 0.4285344555970653 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1', 'nc|ENSG00000167525|Q8NCQ7-3|PROCA1'] 16604 20737 EERRRVRRERN True PC9_epitope_Rep2 1554.8563514433397 1554.85524993586 85.203 2 -1.6916615114826576 0.4285344555970653 1.0 ['ENSG00000175592|ENST00000312562|FOSL1'] 82880 22465 PVVTTAAHW True PC9_epitope_Rep1 980.50796567308 980.50686993586 91.216 2 -1.691713157502931 0.4285344555970653 1.0 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 63821 20163 LPSTYRSLV True PC9_epitope_Rep4 1034.5760452328998 1034.57494993586 85.695 2 -1.691714032252921 0.4285344555970653 1.0 ['nc|ENSG00000129566|Q99973-2|TEP1', 'ENSG00000129566|ENST00000262715|TEP1'] 16340 16627 EEKKRKREREH True NCI_RA007_Epitope_Rep1 1523.8280710068298 1523.82696993586 68.794 2 -1.6917692190367652 0.4285344555970653 1.0 ['ENSG00000028310|ENST00000467963|BRD9', 'ENST00000487688.1_1_5:889867-892539:-|nuORF', 'ENST00000466684.5_1_5:889867-892639:-|nuORF', 'ENST00000495265.5_1_5:889867-892820:-|nuORF', 'ENST00000483173.5_3_5:889166-892639:-|nuORF'] 29073 6025 FTPPQPAE True NCI_RA007_Epitope_Rep2 885.4232329896099 885.42212993586 28.044 2 -1.6917749430467712 0.4285344555970653 1.0 ['nc|ENSG00000198848|P23141-3|CES1', 'nc|ENSG00000198848|P23141|CES1', 'ENSG00000198848|ENST00000360526|CES1'] 137297 20050 YLGPRKMTVIL True H1975_Epitope_Rep2 1289.75296404905 1289.75131490379 83.102 3 -1.6919530068244344 0.42856017731972684 1.0 ['ENSG00000104804|ENST00000221399|TULP2'] 29870 11799 FVWWDWARWER True NCI_RA007_Epitope_Rep2 1635.7735162528295 1635.7724099358602 50.495 2 -1.6920059727313352 0.42856017731972684 1.0 ['NAGLU-SH3GL1|1|fusion', 'ENSG00000108784|ENST00000225927|NAGLU'] 27138 18528 FLRHEDAMPA True PC9_epitope_Rep5 1185.5600778989299 1185.5589899358602 76.292 2 -1.692047520503733 0.42856017731972684 1.0 ['ENST00000472038.1_1_1:167599603-167633027:+|nuORF'] 62370 17015 LLRPHGRR True H1975_Epitope_Rep1 1003.6151651366299 1003.61406993586 70.871 2 -1.6921197065028624 0.42856017731972684 1.0 ['ENST00000482899.1_1_7:150737010-150738273:+|nuORF'] 43020 19436 IGGARQGG True PC9_epitope_Rep3 714.3772858566999 714.37673496793 79.987 1 -1.692129400055795 0.42856017731972684 1.0 ['ENSG00000149243|ENST00000539798|KLHL35', 'ENST00000460787.1_1_11:75133626-75136632:-|nuORF'] 52575 22410 KPVQGGGL True PC9_epitope_Rep6 754.4337381036598 754.43264993586 99.183 2 -1.6923608257608225 0.42856017731972684 1.0 ['NCOA1|p.L960P|1|0.2|ENSG00000084676|chr2:24728469-24728469|T/C|missense_variant'] 71014 16951 MERIVICLMV True H1975_Epitope_Rep1 1205.63344316333 1205.63234993586 70.622 2 -1.6924642356553834 0.42856017731972684 1.0 ['nc|ENSG00000138684|Q9HBE4-2|IL21', 'ENSG00000138684|ENST00000648588|IL21'] 10361 18188 CITPKRRLTR True H1975_Epitope_Rep2 1242.7342942931398 1242.73264490379 75.392 3 -1.6924797895598145 0.42856017731972684 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 83143 13778 PYRVYKNQIY True PC9_epitope_Rep4 1342.70337100434 1342.7022699358602 60.893 2 -1.6925551089318238 0.42856017731972684 1.0 ['ENSG00000135905|ENST00000258390|DOCK10', 'nc|ENSG00000135905|Q96BY6-3|DOCK10'] 137538 5621 YLRFWKDVYLY True NCI_RA007_Epitope_Rep2 1564.8078360728798 1564.80619490379 26.478 3 -1.6926059560055522 0.42856017731972684 1.0 ['ENST00000359933.5_1_14:96749930-96750203:-|nuORF'] 126123 21066 VPELLGTA True NCI_RA007_Epitope_Rep5 798.44871946146 798.44762993586 88.044 2 -1.6927481351655926 0.42856017731972684 1.0 ['ENSG00000167612|ENST00000301190|ANKRD33'] 104914 6001 STFQVFQE True PC9_epitope_Rep4 984.4552613938798 984.45416993586 30.051 2 -1.6928250395305882 0.4285666066606661 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 20365 20771 EPIKYFNNK True PC9_epitope_Rep5 1151.59750895347 1151.59640993586 84.946 2 -1.692934518745757 0.4285842868554584 1.0 ['nc|ENSG00000174527|Q8N1T3-3|MYO1H', 'nc|ENSG00000174527|Q8N1T3|MYO1H', 'ENSG00000174527|ENST00000310903|MYO1H'] 93978 20100 RVPCLIPP True PC9_epitope_Rep6 893.5156939058099 893.51458993586 89.99 2 -1.6929791499844384 0.4285858938154653 1.0 ['ENST00000583167.5_1_17:45892556-45892844:-|nuORF'] 137118 14051 YLDEERTV True PC9_epitope_Rep2 1023.48728979815 1023.4861899358599 59.326 2 -1.6929967770445349 0.4285858938154653 1.0 ['CON__Q95121', 'ENSG00000132386|ENST00000254722|SERPINF1'] 121021 4111 VGFDFKWPHSQ True NCI_RA007_Epitope_Rep4 1346.64077074778 1346.6396699358602 22.096 2 -1.6932599367303063 0.4286373250528779 1.0 ['nc|ENSG00000144426|Q6ZS30-1|NBEAL1', 'nc|ENSG00000144426|Q6ZS30|NBEAL1', 'ENSG00000144426|ENST00000683969|NBEAL1', 'NBEAL1-MLLT3|1|fusion'] 95872 4466 SDPVIFQT True PC9_epitope_Rep3 905.44944773745 905.44834993586 22.274 2 -1.6934496190047286 0.42865018113088676 1.0 ['ENSG00000103522|ENST00000337929|IL21R', 'ENST00000564583.1_1_16:27455877-27457360:+|nuORF'] 125057 11330 VLPGHLEN True PC9_epitope_Rep3 877.4657665079301 877.46466993586 48.586 2 -1.6935122989700466 0.42865018113088676 1.0 ['ENST00000585033.1_1_18:641361-657928:-|nuORF'] 82251 6307 PTLEGQHSK True NCI_RA007_Epitope_Rep4 995.50360856863 995.50250993586 30.864 2 -1.6935972746592582 0.4286533918326021 1.0 ['ENST00000495143.5_1_2:242438052-242438731:-|nuORF', 'ENST00000478403.5_1_2:242436769-242438604:-|nuORF', 'ENST00000487962.5_1_2:242435079-242438851:-|nuORF', 'nc|ENSG00000115694|O00506-3|STK25', 'nc|ENSG00000115694|O00506-2|STK25', 'ENSG00000115694|ENST00000316586|STK25'] 92784 22681 RRKRRERKQR True H1975_Epitope_Rep3 1467.9083274465495 1467.9072299358602 94.782 2 -1.69367103633658 0.4286533918326021 1.0 ['ENSG00000130764|ENST00000378251|LRRC47'] 78622 4994 PDTGLLRNLGP True NCI_RA007_Epitope_Rep5 1151.62987171091 1151.6287699358602 25.913 2 -1.6937250634881855 0.4286533918326021 1.0 ['ENSG00000074276|ENST00000261944|CDHR2', 'CDHR2|p.T807Hfs*14|2|0.22|ENSG00000074276|chr5:176584693-176584694|-/C|frameshift_variant'] 114779 24564 TTALILTLVV True PC9_epitope_Rep4 1042.6637976081402 1042.66327496793 102.97 1 -1.693741819169411 0.4286533918326021 1.0 ['ENSG00000100739|ENST00000216629|BDKRB1'] 36755 19827 GVPASTCL True PC9_epitope_Rep6 746.36327558534 746.36272496793 88.925 1 -1.6938581980099408 0.42868231879492863 1.0 ['ENSG00000106384|ENST00000223114|MOGAT3'] 128888 6301 VSTDYWLY True PC9_epitope_Rep5 1045.4756624852898 1045.47456993586 29.212 2 -1.6939552816625811 0.42870642232796735 1.0 ['ENSG00000105605|ENST00000391767|CACNG7', 'ENSG00000075429|ENST00000533854|CACNG5'] 34417 22622 GPWQGGRR True H1975_Epitope_Rep2 912.4678321965998 912.46672993586 93.456 2 -1.6939600819302507 0.42870642232796735 1.0 ['ENSG00000171388|ENST00000429967|APLN'] 60355 24842 LIHLLKCN True H1975_Epitope_Rep1 952.5528076905201 952.55170993586 102.87 2 -1.6941228084072542 0.42872409836434405 1.0 ['nc|ENSG00000186334|Q495N2-3|SLC36A3', 'ENSG00000186334|ENST00000335230|SLC36A3'] 28122 9478 FRGWFYQWKPY True H1975_Epitope_Rep1 1576.7615545868 1576.7599049037901 41.375 3 -1.6941442375681852 0.4287417740030373 1.0 ['nc|ENSG00000140873|Q8TE60-2|ADAMTS18', 'ENSG00000140873|ENST00000282849|ADAMTS18'] 78751 9970 PEGVIEHKGK True H1975_Epitope_Rep1 1092.5927579262 1092.5916699358602 43.286 2 -1.6943151529834661 0.42875944924406045 1.0 ['TTN|p.V1925G|1|0.19|ENSG00000155657|chr2:178776090-178776090|A/C|missense_variant'] 10261 12464 CGECGLGF True PC9_epitope_Rep6 784.2883963929199 784.28728993586 59.369 2 -1.6946723258858407 0.42879479853315033 1.0 ['ENSG00000099326|ENST00000215057|MZF1', 'nc|ENSG00000099326|P28698-2|MZF1', 'ENST00000600004.1_1_19:59073441-59074896:-|nuORF'] 133371 22817 WFKHLPASIV True PC9_epitope_Rep4 1196.67061432408 1196.66950993586 95.987 2 -1.6947228457392889 0.42879479853315033 1.0 ['ENSG00000166685|ENST00000299886|COG1'] 69601 2098 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 10.869 3 -1.694892007209447 0.42886549233987986 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 32775 16200 GICNKRFKLKH True PC9_epitope_Rep2 1342.7655944214198 1342.7644899358602 67.563 2 -1.694932969796745 0.42886549233987986 1.0 ['ENSG00000213588|ENST00000395064|ZBTB9'] 79319 18784 PGKNRDLK True NCI_RA007_Epitope_Rep4 926.5297637468199 926.52866993586 81.266 2 -1.6949450463956084 0.42886549233987986 1.0 ['ENSG00000110880|ENST00000261401|CORO1C', 'nc|ENSG00000110880|Q9ULV4-2|CORO1C', 'nc|ENSG00000110880|Q9ULV4-3|CORO1C'] 90291 6777 RHSRMEQE True PC9_epitope_Rep3 1071.4879755878299 1071.48686993586 31.088 2 -1.6949533908388514 0.42886549233987986 1.0 ['ENST00000526977.5_1_8:145651218-145651356:-|nuORF'] 125914 9443 VNVPGSFV True H1975_Epitope_Rep1 817.43340375049 817.4328549679301 41.237 1 -1.6949766176464487 0.4288719165832424 1.0 ['nc|ENSG00000132561|O00339-3|MATN2', 'nc|ENSG00000132561|O00339-2|MATN2', 'ENSG00000132561|ENST00000254898|MATN2', 'MATN2-C8orf47|3|fusion', 'MATN2-C8orf47|2|fusion', 'nc|ENSG00000132561|O00339-4|MATN2', 'MATN2-C8orf47|1|fusion'] 118582 9953 VEAEAVNRA True H1975_Epitope_Rep3 957.4879585044899 957.48686993586 43.318 2 -1.695098007764916 0.4288895887699091 1.0 ['nc|ENSG00000092964|Q16555-2|DPYSL2', 'nc|ENSG00000092964|Q16555|DPYSL2', 'ENSG00000092964|ENST00000521913|DPYSL2', 'ENST00000521983.1_1_8:26484742-26500445:+|nuORF'] 23427 13269 EVVRYEEEPGL True NCI_RA007_Epitope_Rep1 1318.6404959642596 1318.6393899358602 55.614 2 -1.6952393794130571 0.4289185085203307 1.0 ['ENSG00000118898|ENST00000345988|PPL'] 85043 16215 QIKKKIEKALY True H1975_Epitope_Rep1 1360.8442215815999 1360.8431299358601 67.719 2 -1.6952558741067105 0.4289201075280912 1.0 ['ENSG00000198092|ENST00000356291|TMPRSS11F'] 139934 16915 YVGPFTRQY True PC9_epitope_Rep5 1129.55564414149 1129.5545499358602 70.079 2 -1.6952945020637562 0.4289201075280912 1.0 ['ENSG00000105877|ENST00000409508|DNAH11'] 58943 4278 LFWHRREMWR True NCI_RA007_Epitope_Rep5 1515.7669914037497 1515.76534490379 23.035 3 -1.6954605384961263 0.42896669628496553 1.0 ['ENST00000405315.8_2_19:49403351-49403540:+|nuORF'] 74309 14051 NILDTEKEYAK True NCI_RA007_Epitope_Rep3 1322.67179609254 1322.67068993586 62.574 2 -1.6954754187936232 0.42896669628496553 1.0 ['ENSG00000129675|ENST00000250617|ARHGEF6', 'nc|ENSG00000129675|Q15052-2|ARHGEF6'] 131377 21294 VVSPHGGL True PC9_epitope_Rep6 764.41808803952 764.41698993586 94.76 2 -1.695840236894109 0.42905823342855215 1.0 ['nc|ENSG00000130150|Q8NHP6-2|MOSPD2', 'ENSG00000130150|ENST00000380492|MOSPD2'] 3559 22023 AGNLHLHEDAH True PC9_epitope_Rep5 1212.56358305624 1212.5624899358602 89.738 2 -1.695988374303957 0.42905823342855215 1.0 ['ENSG00000198723|ENST00000361664|TEX45'] 121349 24792 VGHSAGHP True H1975_Epitope_Rep1 760.36163579256 760.36052993586 102.68 2 -1.6960316748533883 0.42905823342855215 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 16595 8233 EERQMVEEYTY True NCI_RA007_Epitope_Rep2 1475.6238599239498 1475.62276993586 36.661 2 -1.6961143900156703 0.42905823342855215 1.0 ['ENST00000366899.3_1_1:221915323-221915383:-|nuORF'] 32724 13309 GHTHMPSV True NCI_RA007_Epitope_Rep4 864.39122166868 864.39012993586 58.339 2 -1.6961239029603066 0.42905823342855215 1.0 ['nc|ENSG00000173692|Q99460-2|PSMD1', 'ENSG00000173692|ENST00000308696|PSMD1'] 12778 8650 DLHSKNKD True PC9_epitope_Rep5 955.47230844035 955.47120993586 38.216 2 -1.696167659718813 0.42905823342855215 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2'] 27259 5893 FLWLSFALH True PC9_epitope_Rep4 1132.6069514383598 1132.60531490379 29.566 3 -1.6962713440500374 0.42905823342855215 1.0 ['ENST00000486015.1_1_10:77162714-77167299:+|nuORF', 'ENST00000484411.1_1_10:77163655-77167299:+|nuORF', 'ENST00000425916.4_1_10:77163018-77167299:+|nuORF'] 45847 12927 ISQFRNDFRQY True H1975_Epitope_Rep1 1472.71606094636 1472.7149699358602 54.798 2 -1.69633172552344 0.42905823342855215 1.0 ['ENST00000566049.5_1_16:19078961-19089477:+|nuORF'] 133822 24896 WLWEFLQR True PC9_epitope_Rep2 1176.60801406752 1176.60637490379 101.43 3 -1.6963459486878163 0.42905823342855215 1.0 ['nc|ENSG00000176700|Q9GZW5-2|SCAND2P', 'ENST00000348993.9_1_15:85175130-85180634:+|nuORF'] 72952 3664 NCIHPGFT True PC9_epitope_Rep2 887.39597269595 887.39486993586 19.364 2 -1.6964492980302694 0.4290630201070577 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 35888 9599 GVAFLGPP True H1975_Epitope_Rep3 756.4170254103599 756.4164749679301 41.936 1 -1.6964518391443795 0.4290630201070577 1.0 ['nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB', 'ACACB|p.E1501Dfs*3|1|0.13|ENSG00000076555|chr12:109237218-109237228|GGAACTTAACC/-|frameshift_variant', 'ACACB|p.M1520Dfs*20|1|0.25|ENSG00000076555|chr12:109237272-109237273|-/A|frameshift_variant', 'ACACB|p.R1637Afs*31|1|0.16|ENSG00000076555|chr12:109241167-109241167|C/-|frameshift_variant', 'ACACB|p.S1919Wfs*12|1|0.19|ENSG00000076555|chr12:109250068-109250071|CTCT/-|frameshift_variant', 'ACACB|p.G1821Afs*44|1|0.22|ENSG00000076555|chr12:109246337-109246337|G/-|frameshift_variant'] 19554 21380 ELQVKTCSF True PC9_epitope_Rep2 1053.5164817514499 1053.5153899358602 87.708 2 -1.69647714365923 0.4290630201070577 1.0 ['ENST00000496080.1_1_7:149420759-149421776:+|nuORF'] 128274 14601 VSALRSGEVF True PC9_epitope_Rep2 1063.56620882519 1063.5651099358602 61.431 2 -1.6964833165338444 0.4290630201070577 1.0 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2', 'ENSG00000100592|ENST00000360909|DAAM1', 'nc|ENSG00000100592|Q9Y4D1|DAAM1'] 20888 20610 EQSLLSRWNPW True H1975_Epitope_Rep3 1414.69934825306 1414.69824993586 86.138 2 -1.696508322475437 0.4290630201070577 1.0 ['TP63-TPRG1|2|fusion', 'TP63-TPRG1|3|fusion', 'TP63-TPRG1|4|fusion', 'ENSG00000188001|ENST00000345063|TPRG1'] 53165 20560 KSRKKSSP True PC9_epitope_Rep6 916.5454138109599 916.54430993586 91.812 2 -1.6965249857746492 0.4290630201070577 1.0 ['ENSG00000050030|ENST00000055682|NEXMIF'] 37088 20709 GVSKKGGS True PC9_epitope_Rep2 718.3973525949399 718.39680496793 85.093 1 -1.6965930375192355 0.4290694405397807 1.0 ['ENST00000240185.7_1_1:11083899-11083992:+|nuORF'] 93568 9860 RSRRYYREQRF True H1975_Epitope_Rep3 1615.8443897773097 1615.8432899358602 42.956 2 -1.6968277902083884 0.4290871061331894 1.0 ['nc|ENSG00000181355|Q8IZS5|OFCC1', 'nc|ENSG00000181355|Q8IZS5-2|OFCC1'] 44899 10558 IQDLLELSPPE True H1975_Epitope_Rep1 1252.6550833992399 1252.6539899358602 45.563 2 -1.6971557461381668 0.4291609972224409 1.0 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 81361 23798 PPSAGFRCC True H1975_Epitope_Rep1 936.39459279696 936.39348993586 98.785 2 -1.6972429817688466 0.42917866138898886 1.0 ['ENSG00000156381|ENST00000286918|ANKRD9'] 2925 5905 AFFALWWRK True PC9_epitope_Rep5 1223.6603839935499 1223.65873490379 27.707 3 -1.697279869582328 0.4291850802325451 1.0 ['ENST00000491154.1_1_X:153669338-153669692:+|nuORF', 'ENST00000476540.1_1_X:153669338-153670248:+|nuORF'] 83005 10649 PYIFRPPNTI True NCI_RA007_Epitope_Rep4 1216.6604435631998 1216.65934993586 47.812 2 -1.6974339212332397 0.42922523332958507 1.0 ['nc|ENSG00000156475|Q00005-2|PPP2R2B'] 62719 6289 LLYEEGLP True NCI_RA007_Epitope_Rep2 932.4854988929999 932.48440993586 29.069 2 -1.6974684500565371 0.4292268249898799 1.0 ['TDP1|p.R276P|1|0.67|ENSG00000042088|chr14:89980575-89980575|G/C|missense_variant'] 90174 4725 RHFLTIGWGGF True NCI_RA007_Epitope_Rep2 1289.66692592597 1289.66527490379 23.008 3 -1.697489255736727 0.4292268249898799 1.0 ['ENST00000437398.5_1_22:24810970-24811030:+|nuORF'] 73554 6566 NFRPTFSLFSW True NCI_RA007_Epitope_Rep1 1400.6877209402 1400.68606490379 29.554 3 -1.6975358054461531 0.4292332430031597 1.0 ['ENSG00000146828|ENST00000354161|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-2|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-3|SLC12A9', 'nc|ENSG00000146828|Q9BXP2-4|SLC12A9', 'SLC12A9|p.G497Rfs*4|1|0.28|ENSG00000146828|chr7:100861535-100861536|-/A|frameshift_variant'] 85675 10282 QLQRDALRHFA True PC9_epitope_Rep2 1353.72656606041 1353.72546993586 44.88 2 -1.6976538089613868 0.42925090516562847 1.0 ['ENSG00000235194|ENST00000452015|PPP1R3E'] 94485 24349 RYGSPGVLPLA True H1975_Epitope_Rep2 1128.62914343492 1128.6274949037902 100.19 3 -1.6978789405679042 0.42925249617702615 1.0 ['ENST00000377191.4_1_20:21283966-21306951:+|nuORF'] 13071 13081 DLRSGVYP True PC9_epitope_Rep3 905.4606811274898 905.45958993586 55.34 2 -1.6978992862974487 0.42925249617702615 1.0 ['ENST00000596053.1_19:21265151-21266852:+|nuORF'] 3324 7726 AGGSVGGH True H1975_Epitope_Rep1 640.2928875264001 640.2923349679301 34.679 1 -1.697983038723449 0.42925891361300694 1.0 ['ENST00000320081.9_1_2:29338399-29344251:+|nuORF'] 53114 8206 KSGEPQSDDIE True H1975_Epitope_Rep3 1203.52552578167 1203.52497496793 36.547 1 -1.6981045320767165 0.4292605043906498 1.0 ['nc|ENSG00000114062|Q05086|UBE3A'] 52128 23757 KLTEILELLV True NCI_RA007_Epitope_Rep3 1169.72712614069 1169.7260299358602 102.98 2 -1.698199636028625 0.4292605043906498 1.0 ['ENSG00000125633|ENST00000376300|CCDC93'] 56763 16417 LEAQEYRLY True H1975_Epitope_Rep1 1183.5873381925899 1183.58624993586 68.509 2 -1.6982846742262538 0.4292781650550933 1.0 ['nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2'] 15227 9189 EAGAFQGG True NCI_RA007_Epitope_Rep3 735.3187679210698 735.3182149679301 43.238 1 -1.6984433274900224 0.42931348519259743 1.0 ['nc|ENSG00000164144|P53367-2|ARFIP1'] 100014 14374 SLKAANAA True NCI_RA007_Epitope_Rep3 744.41300265908 744.4124549679301 63.853 1 -1.698447706222595 0.42931348519259743 1.0 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 37446 16367 GWWAGQVG True NCI_RA007_Epitope_Rep4 859.3976869481099 859.39658993586 70.96 2 -1.6984628188165127 0.42931666404335217 1.0 ['ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF'] 131208 21691 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 89.732 2 -1.6985235147339022 0.42931666404335217 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 78094 16045 PAMTPSKEG True PC9_epitope_Rep3 916.4324177743199 916.43132993586 66.868 2 -1.6985592406140437 0.42931666404335217 1.0 ['nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4', 'nc|ENSG00000071054|O95819-4|MAP4K4', 'nc|ENSG00000071054|O95819-2|MAP4K4', 'nc|ENSG00000071054|O95819-5|MAP4K4', 'nc|ENSG00000071054|O95819-6|MAP4K4', 'ENST00000498066.1_1_2:102484451-102486985:+|nuORF'] 110133 14287 TICTHHPDP True PC9_epitope_Rep3 1019.4494648207899 1019.44887496793 60.043 1 -1.6985953381297387 0.42931666404335217 1.0 ['MUC16|p.A13705T|1|0.38|ENSG00000181143|chr19:8885783-8885783|C/T|missense_variant'] 18989 14853 ELGEFVKN True PC9_epitope_Rep1 934.47599683846 934.47488993586 61.951 2 -1.698984408979031 0.42933432268654365 1.0 ['ENSG00000174125|ENST00000308979|TLR1'] 58840 16302 LFRMLIRLL True PC9_epitope_Rep6 1173.74200544253 1173.7403549037901 75.068 3 -1.6991659398572634 0.42934073840895803 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 880 10898 ADLRAHRRT True H1975_Epitope_Rep1 1094.6057226517398 1094.6046299358602 46.881 2 -1.699348618119071 0.4293471539871162 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 3304 6306 AGGLKELE True PC9_epitope_Rep5 815.4388830537499 815.43778993586 29.231 2 -1.6997477736735995 0.42940012591060345 1.0 ['nc|ENSG00000142186|Q96KG9-3|SCYL1', 'nc|ENSG00000142186|Q96KG9-4|SCYL1', 'nc|ENSG00000142186|Q96KG9-2|SCYL1', 'ENSG00000142186|ENST00000270176|SCYL1', 'nc|ENSG00000142186|Q96KG9-5|SCYL1', 'nc|ENSG00000142186|Q96KG9-6|SCYL1'] 127661 11506 VRELYRAWYRE True H1975_Epitope_Rep1 1539.7946456202296 1539.79354993586 49.242 2 -1.699778230877498 0.42940012591060345 1.0 ['ENSG00000184983|ENST00000498737|NDUFA6'] 78949 10120 PFGKGGAG True H1975_Epitope_Rep1 689.3496741265299 689.34912496793 43.864 1 -1.6998574067140169 0.42940012591060345 1.0 ['ENST00000374825.8_1_6:32936649-32936823:+|nuORF'] 8117 20620 ATERYLHVRP True H1975_Epitope_Rep2 1240.66765420196 1240.66654993586 85.408 2 -1.7001492394983906 0.4294065405326408 1.0 ['nc|ENSG00000092098|Q96EP0-2|RNF31', 'nc|ENSG00000092098|Q96EP0-3|RNF31', 'ENSG00000092098|ENST00000324103|RNF31', 'ENST00000559491.1_1_14:24629014-24629779:+|nuORF'] 48104 25140 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 103.29 3 -1.700395543269539 0.4294273702196542 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 106003 13493 SVLKTKRSS True NCI_RA007_Epitope_Rep5 1004.59784330664 1004.59674993586 58.585 2 -1.7004239958745 0.4294273702196542 1.0 ['ENST00000325870.2_1_9:22451315-22451384:+|nuORF'] 55127 22486 LALYFLFA True PC9_epitope_Rep3 956.5371405430399 956.53604993586 91.767 2 -1.7004427511707338 0.4294273702196542 1.0 ['ENSG00000140931|ENST00000567572|CMTM3'] 133188 25166 WDWVLRRS True PC9_epitope_Rep3 1116.5828619488398 1116.5817699358602 102.16 2 -1.7005124771215039 0.4294273702196542 1.0 ['ENST00000478824.1_1_17:46783758-46784010:+|nuORF'] 16346 7929 EEKPKQDP True H1975_Epitope_Rep2 969.4767251144499 969.4761749679301 35.444 1 -1.700515528792885 0.4294273702196542 1.0 ['ENSG00000031081|ENST00000264245|ARHGAP31'] 5543 7429 ANGGLRHLR True NCI_RA007_Epitope_Rep2 992.5627952105999 992.56168993586 33.524 2 -1.700633224589928 0.42942895683453236 1.0 ['ENST00000265753.12_1_7:73588685-73601976:+|nuORF'] 125022 8580 VLPAVDGSI True PC9_epitope_Rep6 869.4858332461699 869.48472993586 42.792 2 -1.7007271952065435 0.42942895683453236 1.0 ['nc|ENSG00000181830|Q96A29-2|SLC35C1', 'ENSG00000181830|ENST00000314134|SLC35C1'] 107842 5305 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 25.247 2 -1.7007956066434322 0.42943537055563674 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 130108 16755 VTRCNNVG True NCI_RA007_Epitope_Rep1 861.4126853892499 861.41213496793 69.297 1 -1.7009264222028497 0.4294530248870304 1.0 ['ENSG00000237763|ENST00000370083|AMY1A', 'ENSG00000187733|ENST00000622339|AMY1C', 'ENSG00000174876|ENST00000330330|AMY1B', 'ENSG00000240038|ENST00000684275|AMY2B', 'nc|ENSG00000240038|P19961-2|AMY2B', 'ENSG00000243480|ENST00000414303|AMY2A', 'CON__Q3MHH8', 'AMY2A|p.I194Mfs*5|1|0.29|ENSG00000243480|chr1:103619621-103619621|T/-|frameshift_variant', 'AMY2A|p.D221Hfs*10|1|0.13|ENSG00000243480|chr1:103619699-103619700|GA/-|frameshift_variant', 'nc|ENSG00000243480|P04746-2|AMY2A'] 58977 13211 LGAASPRGWVV True H1975_Epitope_Rep1 1111.61382772395 1111.6127299358602 55.913 2 -1.7011139870246261 0.42947067882153256 1.0 ['ENST00000538936.6_2_17:79860746-79861205:-|nuORF'] 23413 11162 EVVLGGRLAA True PC9_epitope_Rep2 983.5763795860698 983.57528993586 48.26 2 -1.701162201502465 0.42947226437363006 1.0 ['ENSG00000079313|ENST00000170168|REXO1'] 60660 11889 LITPLAFA True NCI_RA007_Epitope_Rep1 844.50584041476 844.50474993586 50.228 2 -1.7012031783603285 0.42947226437363006 1.0 ['nc|ENSG00000163507|Q8TCG1-2|CIP2A', 'ENSG00000163507|ENST00000295746|CIP2A', 'ENST00000487834.5_1_3:108281971-108308222:-|nuORF'] 65934 9610 LSLLFKGMMV True NCI_RA007_Epitope_Rep5 1137.62900940589 1137.62737490379 43.607 3 -1.7013218821843652 0.4294786772474878 1.0 ['ENST00000403263.5_1_2:206867288-206867456:-|nuORF'] 84668 21477 QHETVDSVLR True PC9_epitope_Rep6 1182.5992998586198 1182.59764490379 95.488 3 -1.701662716619766 0.4295477025447352 1.0 ['ENSG00000007384|ENST00000262316|RHBDF1'] 90125 19895 RGRRWTLA True H1975_Epitope_Rep3 1014.5835306551799 1014.58242993586 83.285 2 -1.7017661482403563 0.4295477025447352 1.0 ['ENST00000299977.8_1_17:33585758-33585863:+|nuORF'] 3420 8916 AGKTPFQSF True NCI_RA007_Epitope_Rep4 981.4919812557699 981.49088993586 41.127 2 -1.7018640304404935 0.4295492862762729 1.0 ['nc|ENSG00000172932|Q6ZTN6-1|ANKRD13D', 'ENSG00000172932|ENST00000511455|ANKRD13D', 'ENST00000513750.5_1_11:67067055-67069800:+|nuORF', 'ENST00000512231.5_1_11:67066841-67069800:+|nuORF'] 94085 12672 RVWDTRTWDY True H1975_Epitope_Rep2 1396.6523980606398 1396.6513099358601 53.842 2 -1.7018940894996835 0.4295492862762729 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 42986 7161 IGDRDPIP True NCI_RA007_Epitope_Rep2 881.4606811274899 881.45958993586 32.476 2 -1.7020263286157413 0.4295508699366093 1.0 ['ENSG00000126461|ENST00000360565|SCAF1'] 78470 19447 PDDCGDGG True PC9_epitope_Rep2 734.2177335504599 734.21718496793 80.182 1 -1.7020805664575471 0.4295508699366093 1.0 ['ENST00000406420.7_1_2:24239147-24246476:+|nuORF'] 80415 18583 PLKAKTASLF True NCI_RA007_Epitope_Rep4 1074.6437308698999 1074.6426299358602 80.388 2 -1.702119194588873 0.42955728142245403 1.0 ['nc|ENSG00000138119|Q9NZM1-6|MYOF', 'nc|ENSG00000138119|Q9NZM1-3|MYOF', 'ENSG00000138119|ENST00000359263|MYOF', 'nc|ENSG00000138119|Q9NZM1-2|MYOF', 'nc|ENSG00000138119|Q9NZM1-5|MYOF'] 24788 25434 FCDVHPVL True NCI_RA007_Epitope_Rep5 928.4476739156399 928.44656993586 105.37 2 -1.7021690526129518 0.4295749320026075 1.0 ['ENSG00000176567|ENST00000320048|OR4X1', 'OR4S2|p.V269Wfs*12|1|0.23|ENSG00000174982|chr11:55651707-55651707|G/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 47803 14604 IYRFLPFFFV True PC9_epitope_Rep5 1347.7379656079097 1347.73633490379 61.175 3 -1.702322907711421 0.42960382129811747 1.0 ['ENSG00000168273|ENST00000477703|UQCC5'] 61905 17756 LLLKTHPD True PC9_epitope_Rep1 935.54401682863 935.54290993586 73.095 2 -1.702426944501403 0.42961664250311876 1.0 ['ENST00000524260.1_1_8:93972764-93977317:-|nuORF'] 30797 9196 GAPLSHLT True PC9_epitope_Rep1 794.4286527232201 794.42754993586 40.223 2 -1.702427745474894 0.42961664250311876 1.0 ['ENST00000481170.1_1_2:220364697-220365012:+|nuORF'] 91074 20882 RLLKQKLKKKK True PC9_epitope_Rep1 1409.9922232279698 1409.99112993586 85.142 2 -1.7024785156416145 0.4296230528894783 1.0 ['ENST00000584588.5_1_17:38027782-38031519:+|nuORF'] 59705 17273 LGTPSEYHYL True H1975_Epitope_Rep2 1178.56078909158 1178.5596899358602 71.732 2 -1.7025569006974672 0.42964070173861246 1.0 ['ENSG00000169994|ENST00000409816|MYO7B', 'nc|ENSG00000169994|Q6PIF6|MYO7B', 'MYO7B|p.S1119*|1|0.51|ENSG00000169994|chr2:127620375-127620376|CG/-|frameshift_variant', 'MYO7B|p.K900Rfs*26|1|0.3|ENSG00000169994|chr2:127608762-127608762|A/-|frameshift_variant', 'MYO7B|p.F398Lfs*107|1|0.1|ENSG00000169994|chr2:127582002-127582002|T/-|frameshift_variant', 'nc|ENSG00000169994|Q6PIF6-2|MYO7B'] 126671 20538 VPRHIRLP True PC9_epitope_Rep1 986.6137681542999 986.61321496793 83.814 1 -1.7027487781038095 0.4296583501910542 1.0 ['ENST00000372476.7_1_1:43773103-43773491:+|nuORF'] 9586 9381 AYDRQQLWKAN True H1975_Epitope_Rep2 1391.6945972257897 1391.6935099358602 41.046 2 -1.7029115849148577 0.42968723660107216 1.0 ['ENSG00000183856|ENST00000361170|IQGAP3', 'IQGAP3|p.R772Pfs*13|1|0.15|ENSG00000183856|chr1:156544452-156544462|CCTATAACCCC/-|frameshift_variant'] 130998 24783 VVLFTILL True H1975_Epitope_Rep1 916.5997407995999 916.59864993586 102.65 2 -1.703002913508827 0.4296919774798566 1.0 ['ENST00000569936.5_1_15:74476032-74483282:-|nuORF'] 130059 22065 VTQFDNVR True PC9_epitope_Rep2 977.4930438849299 977.49194993586 90.345 2 -1.7032505265809483 0.4296919774798566 1.0 ['ENSG00000139613|ENST00000550164|SMARCC2', 'SMARCC2|p.K898Sfs*42|1|0.2|ENSG00000139613|chr12:56168124-56168124|T/-|frameshift_variant', 'nc|ENSG00000139613|Q8TAQ2-2|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2-3|SMARCC2', 'nc|ENSG00000139613|Q8TAQ2|SMARCC2'] 10286 22389 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 97.138 2 -1.7033224622931273 0.4296919774798566 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 55867 21206 LDFMGWLGAI True PC9_epitope_Rep2 1121.5579526406098 1121.55684993586 87.027 2 -1.703346946654228 0.4296919774798566 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1', 'nc|ENSG00000186635|Q96P48-5|ARAP1'] 41082 3353 HYLEFEKTRYE True NCI_RA007_Epitope_Rep2 1513.7201432672898 1513.71850490379 17.703 3 -1.7033497732163594 0.4296919774798566 1.0 ['ENSG00000156011|ENST00000327040|PSD3', 'nc|ENSG00000156011|Q9NYI0|PSD3', 'ENST00000518315.5_1_8:18393255-18632402:-|nuORF', 'nc|ENSG00000156011|Q9NYI0-3|PSD3'] 124561 14725 VLGPGRGF True H1975_Epitope_Rep3 801.4497225209699 801.44917496793 62.015 1 -1.7033991765827827 0.4296919774798566 1.0 ['ENSG00000111271|ENST00000313698|ACAD10', 'nc|ENSG00000111271|Q6JQN1-5|ACAD10', 'ENST00000547491.1_1_12:112186933-112194274:+|nuORF'] 90917 21161 RLEHEKRRKEI True H1975_Epitope_Rep2 1492.85864285912 1492.8569849037901 87.591 3 -1.7036019002088845 0.4297208612397177 1.0 ['ENST00000587602.5_1_19:1073185-1086002:+|nuORF', 'ENSG00000180448|ENST00000313093|ARHGAP45', 'nc|ENSG00000180448|Q92619-2|ARHGAP45'] 43911 18999 ILDQRPKYV True PC9_epitope_Rep6 1130.64479349906 1130.64368993586 85.723 2 -1.703729013706844 0.4297609816943667 1.0 ['ENST00000469479.1_1_3:184550518-184567079:+|nuORF'] 121226 20064 VGGPNGGK True PC9_epitope_Rep6 684.35548778296 684.35493496793 89.843 1 -1.7039727948411554 0.42976720147409103 1.0 ['ATN1|p.F950*|1|0.26|ENSG00000111676|chr12:6938810-6938823|CTTTGAGGTGAAGC/-|frameshift_variant', 'ENSG00000111676|ENST00000396684|ATN1'] 93977 21956 RVPCLIPP True PC9_epitope_Rep5 893.5156939058099 893.51458993586 89.489 2 -1.7040040707792792 0.42976720147409103 1.0 ['ENST00000583167.5_1_17:45892556-45892844:-|nuORF'] 58837 12265 LFRMLIRLL True NCI_RA007_Epitope_Rep1 1173.74200544253 1173.7403549037901 51.679 3 -1.7040224282716185 0.42976720147409103 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 90335 19740 RIHNGQKLVV True NCI_RA007_Epitope_Rep1 1162.69347502698 1162.6923699358601 80.971 2 -1.704029176688838 0.42976720147409103 1.0 ['ENSG00000110429|ENST00000265651|FBXO3', 'nc|ENSG00000110429|Q9UK99-3|FBXO3', 'nc|ENSG00000110429|Q9UK99-2|FBXO3', 'ENST00000530013.5_1_11:33775932-33796043:-|nuORF'] 80651 11595 PLPPPGAL True PC9_epitope_Rep2 760.44832553864 760.44722993586 49.927 2 -1.7040348863258068 0.42976720147409103 1.0 ['ENST00000552279.1_1_12:58149512-58151020:+|nuORF', 'ENSG00000139266|ENST00000266643|MARCHF9'] 119048 17234 VEGPSKVDI True NCI_RA007_Epitope_Rep1 942.5022115863 942.50110993586 71.167 2 -1.7040926238844336 0.42976720147409103 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000477629.1_1_3:58135593-58136214:+|nuORF', 'nc|ENSG00000136068|O75369-5|FLNB', 'nc|ENSG00000136068|O75369-4|FLNB'] 80465 25522 PLLAHLPA True PC9_epitope_Rep3 830.50142374066 830.50087496793 103.64 1 -1.7041273828556063 0.42976720147409103 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 38274 22856 HFGFILLM True H1975_Epitope_Rep1 976.52044493308 976.51934993586 95.062 2 -1.7041717104275407 0.42976720147409103 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 63335 7797 LPEAVVLWLC True H1975_Epitope_Rep1 1141.62055289717 1141.61944993586 34.947 2 -1.704216916470658 0.42976720147409103 1.0 ['ENST00000462848.5_1_2:219894910-219906234:-|nuORF'] 27941 14340 FQPTLTIQ True PC9_epitope_Rep4 946.5123823471799 946.51128993586 63.061 2 -1.7042425550053242 0.42976720147409103 1.0 ['PTPRT|p.S839F|1|0.24|ENSG00000196090|chr20:42161518-42161518|G/A|missense_variant'] 106318 22810 SVRSTTAL True PC9_epitope_Rep1 833.4606811274899 833.45958993586 92.551 2 -1.7042484140612637 0.42976720147409103 1.0 ['ENSG00000164880|ENST00000404767|INTS1', 'ENST00000468115.1_1_7:1523234-1533501:-|nuORF'] 47218 12085 IYDKFIAH True NCI_RA007_Epitope_Rep4 1005.5283667644899 1005.52726993586 53.484 2 -1.704294821652196 0.42976720147409103 1.0 ['PMF1|p.Q83H|1|0.2|ENSG00000160783|chr1:156232407-156232407|G/T|missense_variant'] 48114 26651 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 109.81 3 -1.704390405113833 0.42976720147409103 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 48092 26414 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 109.82 3 -1.7044572842696406 0.42976720147409103 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 71955 10127 MPTVIDEYLG True NCI_RA007_Epitope_Rep1 1136.5423621461198 1136.54126993586 43.403 2 -1.7045010319966643 0.42976720147409103 1.0 ['CES3|p.S424Efs*27|1|0.12|ENSG00000172828|chr16:66971296-66971314|TCAGTTTTTCAAGATACCT/-|frameshift_variant', 'ENSG00000172828|ENST00000303334|CES3', 'nc|ENSG00000172828|Q6UWW8-2|CES3'] 63836 18388 LPTHEAPL True PC9_epitope_Rep2 876.4705175352 876.46942993586 76.061 2 -1.7045182017395324 0.4297686854729085 1.0 ['OR52E2|p.R235P|1|0.28|ENSG00000176787|chr11:5058924-5058924|C/G|missense_variant'] 134110 14599 WRCFQWWRMDW True H1975_Epitope_Rep3 1698.7336426701397 1698.73254993586 61.522 2 -1.7045777206073627 0.4297686854729085 1.0 ['ENST00000582986.5_1_17:62801160-62833227:-|nuORF', 'ENST00000430334.7_1_17:43555485-43568071:-|nuORF'] 134461 15703 WTPVNGTD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 68.203 2 -1.7046883206599512 0.4297686854729085 1.0 ['nc|ENSG00000153956|P54289-3|CACNA2D1', 'ENSG00000153956|ENST00000356860|CACNA2D1', 'nc|ENSG00000153956|P54289-4|CACNA2D1', 'nc|ENSG00000153956|P54289-5|CACNA2D1', 'nc|ENSG00000153956|P54289|CACNA2D1'] 113025 6952 TPTSADTRTG True PC9_epitope_Rep4 1005.47270236317 1005.47160993586 33.977 2 -1.7048021458444067 0.4297686854729085 1.0 ['ENST00000594641.1_1_19:51462406-51462502:-|nuORF'] 122557 20929 VGTASSPV True PC9_epitope_Rep5 716.3704691407601 716.36992496793 85.56 1 -1.7048828799667939 0.4297686854729085 1.0 ['nc|ENSG00000103197|P49815-8|TSC2', 'ENST00000461648.2_1_16:2098014-2103834:+|nuORF'] 30763 10319 GAPEEVGG True NCI_RA007_Epitope_Rep5 714.3184335678999 714.31788496793 46.323 1 -1.7049410701178156 0.4297686854729085 1.0 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5'] 60728 26206 LKAKKPQKRKP True PC9_epitope_Rep3 1320.8717737421198 1320.8701349037901 106.88 3 -1.7049943703789772 0.4297686854729085 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 91520 20811 RPAAHQAQA True NCI_RA007_Epitope_Rep5 948.4889615639999 948.48786993586 87.033 2 -1.7049988732866035 0.4297686854729085 1.0 ['nc|ENSG00000186074|Q8TDQ1-5|CD300LF'] 119892 19083 VEVWDVVDKGK True H1975_Epitope_Rep3 1272.6714021697196 1272.6703099358601 80.021 2 -1.7050918220398728 0.4297686854729085 1.0 ['nc|ENSG00000196642|Q3YEC7-4|RABL6', 'nc|ENSG00000196642|Q3YEC7-5|RABL6', 'nc|ENSG00000196642|Q3YEC7-6|RABL6', 'nc|ENSG00000196642|Q3YEC7-3|RABL6', 'ENSG00000196642|ENST00000311502|RABL6', 'nc|ENSG00000196642|Q3YEC7-2|RABL6'] 47121 7560 IVYLPVFFISE True NCI_RA007_Epitope_Rep5 1325.7271261406897 1325.72548490379 35.765 3 -1.705164186601258 0.42977509155863125 1.0 ['ENST00000367210.2_2_1:203822500-203822629:+|nuORF'] 43577 24852 IIFIKLNL True H1975_Epitope_Rep1 972.6371889374799 972.63608993586 102.91 2 -1.7053889750500983 0.42980396562377127 1.0 ['ENST00000344302.8_1_X:46332443-46332647:+|nuORF'] 90814 17656 RKSLKENI True NCI_RA007_Epitope_Rep4 986.58727862294 986.58618993586 76.394 2 -1.705614072120406 0.429805542761495 1.0 ['ENST00000526950.1_1_12:104719175-104720128:+|nuORF'] 58773 16049 LFNFCWTL True NCI_RA007_Epitope_Rep4 1042.49462410806 1042.4935299358601 69.609 2 -1.7056444792213445 0.429805542761495 1.0 ['nc|ENSG00000080839|P28749-2|RBL1', 'ENSG00000080839|ENST00000373664|RBL1'] 83417 24002 QCEECQCWQH True H1975_Epitope_Rep1 1292.4372625379199 1292.43616993586 99.606 2 -1.7056784013996362 0.4298119481453189 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 93604 9430 RSYQELVKVW True PC9_epitope_Rep5 1306.7033710043397 1306.70173490379 41.227 3 -1.705923401170795 0.4298872264905423 1.0 ['ENSG00000178401|ENST00000549441|DNAJC22'] 137821 26498 YPEYLSNFP True PC9_epitope_Rep5 1128.51277627 1128.51112490379 107.9 3 -1.7059550521277576 0.4298872264905423 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 30413 24897 GAFQPKVS True PC9_epitope_Rep1 832.4443027873599 832.4437549679301 100.68 1 -1.7061303956701357 0.4298872264905423 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1'] 93721 24480 RTRARRNLYKK True PC9_epitope_Rep4 1460.8800470100398 1460.8789499358602 102.65 2 -1.7061708869046985 0.4298872264905423 1.0 ['ENSG00000171456|ENST00000375687|ASXL1', 'ASXL1|p.G646Wfs*12|1|0.34|ENSG00000171456|chr20:32434638-32434639|-/G|frameshift_variant', 'ASXL1|p.T613Pfs*90|1|0.39|ENSG00000171456|chr20:32434547-32434547|G/-|frameshift_variant', 'nc|ENSG00000171456|Q8IXJ9-2|ASXL1'] 59758 14301 LGWRLIGV True PC9_epitope_Rep3 912.5545219426798 912.55342993586 60.095 2 -1.706199272774892 0.4298872264905423 1.0 ['nc|ENSG00000106948|Q7Z591-6|AKNA'] 131222 26235 VVPQLKYKV True PC9_epitope_Rep5 1072.6644663144798 1072.6633699358601 106.68 2 -1.7062261890211257 0.4298872264905423 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 52279 6799 KNVVLVASP True NCI_RA007_Epitope_Rep3 925.5596668927699 925.55856993586 33.85 2 -1.7063739474692625 0.4298872264905423 1.0 ['ENSG00000147724|ENST00000395297|FAM135B', 'nc|ENSG00000147724|Q49AJ0-2|FAM135B', 'ENST00000482951.6_1_8:139144838-139379577:-|nuORF'] 30000 6105 FYGPGPPA True PC9_epitope_Rep6 804.3806399016398 804.37954993586 31.889 2 -1.7064263014185934 0.4298872264905423 1.0 ['ENSG00000178951|ENST00000322357|ZBTB7A'] 48140 27230 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 114.27 3 -1.7064408473378747 0.4298872264905423 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 120575 7060 VGAETPRALG True PC9_epitope_Rep5 969.5243440132098 969.52324993586 32.124 2 -1.7064707117242486 0.4298872264905423 1.0 ['ENST00000507667.1_3_4:141445438-141445687:+|nuORF'] 124659 13363 VLIHSSRAL True PC9_epitope_Rep2 994.59236400338 994.5912699358599 56.676 2 -1.7065932873425993 0.4299064370837124 1.0 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11'] 53138 7349 KSLREPVA True PC9_epitope_Rep1 898.5236157372199 898.52250993586 33.079 2 -1.7066205179812055 0.4299064370837124 1.0 ['ENSG00000115183|ENST00000263635|TANC1', 'nc|ENSG00000115183|Q9C0D5-2|TANC1', 'ENST00000470074.1_1_2:160076105-160087520:+|nuORF'] 61521 12017 LLGAPQRGAL True PC9_epitope_Rep6 994.5923640033799 994.5912699358599 57.511 2 -1.706621355831857 0.4299064370837124 1.0 ['ENST00000597346.1_1_11:2720561-2721134:-|nuORF'] 53003 17854 KRRKHQVP True NCI_RA007_Epitope_Rep4 1047.64137988447 1047.64087496793 77.302 1 -1.7067294488102693 0.4299144147179729 1.0 ['ENST00000272462.2_1_2:110873982-110874102:-|nuORF'] 88265 5236 QYFGLKAEAAP True H1975_Epitope_Rep3 1193.6080736371698 1193.60641490379 25.225 3 -1.7068529356733173 0.4299144147179729 1.0 ['nc|ENSG00000185615|Q13087-2|PDIA2', 'ENSG00000185615|ENST00000219406|PDIA2'] 82298 26460 PTPPDELLPQA True PC9_epitope_Rep2 1176.60265390356 1176.60100490379 108.2 3 -1.7068613601468123 0.4299144147179729 1.0 ['nc|ENSG00000007171|P35228-2|NOS2', 'chr17:27789688-27793588|304|24.82|0.71|5.12|-|ENST00000646938|NOS2,NOS2', 'ENSG00000007171|ENST00000313735|NOS2'] 121430 16825 VGIFFFFFV True PC9_epitope_Rep6 1121.5949897723299 1121.59388993586 77.226 2 -1.7070981197202837 0.42995608567224863 1.0 ['ENST00000401990.5_1_2:242256943-242257661:+|nuORF'] 131207 21543 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 89.126 2 -1.707195711868006 0.42995608567224863 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 59295 9469 LGGYPGCA True NCI_RA007_Epitope_Rep2 736.32141077336 736.3208649679301 41.444 1 -1.707206614538857 0.42995608567224863 1.0 ['ENST00000494348.1_1_19:7974966-7975513:+|nuORF'] 27070 12429 FLPGRYPR True NCI_RA007_Epitope_Rep1 1004.55558457184 1004.55448993586 52.323 2 -1.7072740477963109 0.42996248792650327 1.0 ['ENST00000578456.1_1_17:9820547-9830233:-|nuORF'] 80464 25058 PLLAHLPA True NCI_RA007_Epitope_Rep1 830.50142374066 830.50087496793 103.71 1 -1.7074153946042114 0.42996709750592355 1.0 ['ENST00000274629.8_1_5:169805486-169810683:-|nuORF'] 135294 24772 YCCSACHG True NCI_RA007_Epitope_Rep1 842.25096533838 842.25041496793 102.56 1 -1.707493102221674 0.42996709750592355 1.0 ['ENST00000341426.9_1_1:1696756-1696807:-|nuORF', 'ENST00000464373.1_1_1:1693389-1696851:-|nuORF', 'ENST00000460602.5_1_1:1688544-1696851:-|nuORF', 'ENST00000492845.6_1_1:1687687-1696851:-|nuORF', 'ENSG00000008130|ENST00000341426|NADK', 'nc|ENSG00000008130|O95544-2|NADK'] 79610 19099 PGYFPHPD True NCI_RA007_Epitope_Rep5 928.4079172786398 928.40682993586 80.334 2 -1.7076201239176754 0.42996709750592355 1.0 ['nc|ENSG00000106772|Q8WUY3-4|PRUNE2', 'ENSG00000106772|ENST00000376718|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-2|PRUNE2', 'nc|ENSG00000106772|Q8WUY3-3|PRUNE2'] 90203 25146 RHITLDKTW True PC9_epitope_Rep1 1168.63529144452 1168.6341899358601 101.61 2 -1.7076483036087775 0.42996709750592355 1.0 ['ENSG00000095380|ENST00000210444|NANS'] 56989 8497 LEEDHRIF True NCI_RA007_Epitope_Rep2 1057.51925863277 1057.5181699358602 37.695 2 -1.7076658894358514 0.42996709750592355 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2'] 92677 11894 RRGRAPLSSA True PC9_epitope_Rep4 1069.6104736790098 1069.60936993586 53.525 2 -1.7077331833284757 0.42996709750592355 1.0 ['ENST00000396958.7_2_16:2933286-2946389:+|nuORF'] 84513 7520 QGTPDQAKHRF True NCI_RA007_Epitope_Rep5 1283.6370823496698 1283.6365749679298 35.61 1 -1.7077442594660253 0.42996709750592355 1.0 ['RP1|p.Q439P|1|0.31|ENSG00000104237|chr8:54625198-54625198|A/C|missense_variant'] 39504 8979 HPDSITTIK True PC9_epitope_Rep1 1010.5396597241801 1010.53856993586 39.383 2 -1.7077645294493917 0.42996709750592355 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST'] 82638 22792 PVLLHLPRM True PC9_epitope_Rep4 1074.63720602082 1074.63610993586 95.89 2 -1.707787898192477 0.42996709750592355 1.0 ['ENST00000489097.5_1_1:6526697-6527309:-|nuORF'] 134215 18340 WRQWNRIFRWK True PC9_epitope_Rep5 1674.90078245462 1674.89914490379 75.559 3 -1.7078503076031797 0.42996709750592355 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.G158Sfs*29|1|0.37|ENSG00000081248|chr1:201092040-201092042|CCG/AA|frameshift_variant', 'CACNA1S|p.G577Afs*35|2|0.19|ENSG00000081248|chr1:201077017-201077017|C/-|frameshift_variant'] 36734 14815 GVNPDGSP True NCI_RA007_Epitope_Rep4 741.32933260477 741.32878496793 64.447 1 -1.707852610212381 0.42996709750592355 1.0 ['ENSG00000151461|ENST00000357604|UPF2'] 10693 4295 CSLWRCVWEL True NCI_RA007_Epitope_Rep5 1293.59983453593 1293.59818490379 23.106 3 -1.707877754705426 0.42996709750592355 1.0 ['ENST00000592839.6_1_19:2243417-2245742:+|nuORF'] 49568 22596 KKKEKKKSGRV True H1975_Epitope_Rep3 1314.8459529171 1314.84430490379 94.448 3 -1.707890499467891 0.42996709750592355 1.0 ['ENST00000481407.5_1_7:92207439-92210911:-|nuORF'] 20308 23003 EPDLKWKIKL True PC9_epitope_Rep3 1268.7492585675998 1268.74816993586 93.748 2 -1.7081917886654656 0.42998472802407584 1.0 ['ENST00000347053.7_1_7:107052966-107053029:-|nuORF'] 76964 6805 NVPLEREA True H1975_Epitope_Rep2 926.48214484806 926.48104993586 31.093 2 -1.708211749840078 0.43000235814627247 1.0 ['nc|ENSG00000078674|Q15154-2|PCM1', 'ENSG00000078674|ENST00000325083|PCM1', 'nc|ENSG00000078674|Q15154-5|PCM1'] 3085 24403 AGAHALYL True PC9_epitope_Rep2 814.4337381036601 814.43264993586 99.435 2 -1.708278712569023 0.43001998787252677 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 117683 14633 VAKKINAF True PC9_epitope_Rep5 889.5385375253699 889.53744993586 61.286 2 -1.7084062891330534 0.4300440172475746 1.0 ['APOB|p.E2332K|1|0.13|ENSG00000084674|chr2:21009874-21009874|C/T|missense_variant'] 37480 15253 GYDGWQIL True PC9_epitope_Rep1 950.4497820906199 950.44868993586 63.49 2 -1.7084557164643785 0.4300440172475746 1.0 ['nc|ENSG00000166947|P16452-2|EPB42', 'ENSG00000166947|ENST00000441366|EPB42', 'ENST00000567019.1_1_15:43489502-43501706:-|nuORF'] 91450 21611 RNPVSMET True PC9_epitope_Rep6 932.43856578392 932.43746993586 96.005 2 -1.7086233983562693 0.4300647870560627 1.0 ['ENSG00000128915|ENST00000261520|ICE2', 'ENST00000558121.5_1_15:60715835-60734771:-|nuORF'] 122781 12386 VGVHPSPGA True PC9_epitope_Rep2 819.4239016959499 819.42280993586 52.952 2 -1.7088931894023456 0.4300647870560627 1.0 ['ENST00000588984.5_1_19:3751026-3754498:-|nuORF', 'ENSG00000011132|ENST00000316757|APBA3'] 61106 23033 LLCRTLAHL True PC9_epitope_Rep3 1038.6008205121 1038.59972993586 93.865 2 -1.7089482705676258 0.4300647870560627 1.0 ['ENSG00000106009|ENST00000340611|BRAT1', 'ENST00000467558.5_1_7:2580597-2582974:-|nuORF', 'ENST00000469750.5_1_7:2580597-2582612:-|nuORF', 'ENST00000493232.5_1_7:2580815-2581753:-|nuORF'] 120734 7247 VGAVAFFYIHM True NCI_RA007_Epitope_Rep3 1253.6267009067699 1253.62504490379 35.616 3 -1.7090270240085832 0.4300647870560627 1.0 ['ENSG00000280021|ENST00000624103|OR51F1'] 5597 8851 ANVLSYLRLFF True H1975_Epitope_Rep2 1341.74450754033 1341.74287490379 39.012 3 -1.709065576984627 0.4300647870560627 1.0 ['nc|ENSG00000144935|P48995-2|TRPC1', 'ENSG00000144935|ENST00000476941|TRPC1'] 19834 19948 ELVDVFVYK True PC9_epitope_Rep5 1110.5961119711399 1110.5950099358602 81.785 2 -1.7093504043382908 0.4301111485348602 1.0 ['ENST00000242465.3_1_10:70864372-70864540:+|nuORF'] 94316 22223 RWVARQRRSS True PC9_epitope_Rep6 1300.72248373948 1300.72084490379 98.439 3 -1.7093828855243491 0.4301111485348602 1.0 ['SVA_D_dup717|chr9:87758582-87759887:-|1.1539223342303233|0.0972128594367668|3.57|448.0|39|2|anti-sense'] 70274 22951 LYPAMPTP True PC9_epitope_Rep3 888.44152590604 888.44042993586 93.546 2 -1.709396059434798 0.4301111485348602 1.0 ['ENST00000590923.5_2_19:10687899-10687995:-|nuORF'] 5893 6822 APGSPFRV True PC9_epitope_Rep5 829.44463714053 829.44354993586 31.213 2 -1.7094408667229541 0.4301111485348602 1.0 ['ENSG00000197892|ENST00000524189|KIF13B', 'nc|ENSG00000197892|Q9NQT8-2|KIF13B'] 69331 19525 LVPRGWHS True PC9_epitope_Rep5 950.5086343794201 950.50752993586 80.155 2 -1.7094805699169948 0.4301111485348602 1.0 ['ENST00000368086.5_2_1:160064936-160068275:-|nuORF'] 57383 11529 LEHLRITV True PC9_epitope_Rep6 979.58146496651 979.58036993586 55.43 2 -1.7094844680004546 0.4301111485348602 1.0 ['ENSG00000156510|ENST00000354624|HKDC1'] 74990 7244 NLWKCNCHL True PC9_epitope_Rep4 1129.51610491197 1129.51500993586 35.17 2 -1.7095481824920968 0.4301111485348602 1.0 ['ENSG00000144771|ENST00000273286|LRTM1', 'nc|ENSG00000144771|Q9HBL6-2|LRTM1'] 9285 13027 AVRTFVSH True H1975_Epitope_Rep1 915.4926499621099 915.49154993586 55.191 2 -1.709570116893224 0.4301111485348602 1.0 ['ENST00000591478.1_1_16:5080487-5083590:-|nuORF', 'nc|ENSG00000103174|Q9UK23-3|NAGPA', 'ENST00000568202.5_1_16:5075546-5083878:-|nuORF', 'nc|ENSG00000103174|Q9UK23-2|NAGPA', 'ENSG00000103174|ENST00000312251|NAGPA'] 67713 4907 LTGHLCAP True NCI_RA007_Epitope_Rep4 810.40580910366 810.40470993586 25.333 2 -1.7095845419719415 0.4301111485348602 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 4941 5300 ALHSPQYI True NCI_RA007_Epitope_Rep5 927.48141657207 927.48030993586 27.08 2 -1.7097287789728672 0.43012394467397164 1.0 ['ENSG00000103194|ENST00000219473|USP10', 'nc|ENSG00000103194|Q14694-2|USP10', 'ENST00000540269.6_1_16:84733615-84778337:+|nuORF'] 86082 10228 QPPDTYLK True H1975_Epitope_Rep1 960.4916469025999 960.49109496793 44.285 1 -1.7097869890038746 0.43012394467397164 1.0 ['nc|ENSG00000083312|Q92973-3|TNPO1', 'nc|ENSG00000083312|Q92973-2|TNPO1', 'ENSG00000083312|ENST00000337273|TNPO1', 'ENST00000436471.2_1_17:20385129-20386047:-|nuORF'] 92897 11573 RRNSWGEGVI True H1975_Epitope_Rep1 1172.6050539453997 1172.60394993586 49.502 2 -1.7098601756473195 0.4301319113106932 1.0 ['ENST00000531976.1_1_11:1490888-1491104:-|nuORF'] 123055 4536 VGYSGNGR True PC9_epitope_Rep3 808.38276515996 808.38166993586 22.542 2 -1.709950850448727 0.4301319113106932 1.0 ['ENSG00000161996|ENST00000293879|WDR90', 'ENST00000546516.5_1_16:705169-713132:+|nuORF', 'ENST00000552728.5_1_16:708591-715679:+|nuORF', 'ENST00000552683.5_1_16:707859-713132:+|nuORF', 'ENST00000547407.5_1_16:706280-710806:+|nuORF'] 131112 14116 VVNGGVPWP True PC9_epitope_Rep1 923.4865019525099 923.48540993586 59.125 2 -1.7099784973203649 0.4301319113106932 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ATXN2|p.A578Qfs*70|1|0.18|ENSG00000204842|chr12:111516277-111516277|C/-|frameshift_variant', 'nc|ENSG00000204842|Q99700-5|ATXN2'] 8825 14485 AVFPSIVG True NCI_RA007_Epitope_Rep4 788.4432401582 788.44214993586 63.07 2 -1.7101843808268127 0.43013504866466845 1.0 ['ACTG1-KRT17|1|fusion', 'ENST00000576917.5_1_17:79478157-79479765:-|nuORF', 'ENST00000493945.5_1_7:5567882-5569288:-|nuORF', 'ACTB|p.L142Pfs*16|1|0.11|ENSG00000075624|chr7:5528658-5528659|-/G|frameshift_variant', 'ENST00000462494.5_1_7:5568599-5569288:-|nuORF', 'ENST00000576214.2_1_17:79478712-79479765:-|nuORF', 'ENST00000482085.1_1_10:90708534-90712518:-|nuORF', 'ENST00000441772.1_1_11:1824983-1825307:-|nuORF', 'ACTA1|p.R30S|1|0.2|ENSG00000143632|chr1:229433026-229433026|C/A|missense_variant', 'ACTA1|p.R30M|1|0.2|ENSG00000143632|chr1:229433027-229433027|C/A|missense_variant', 'ACTG2|p.R29W|1|0.19|ENSG00000163017|chr2:73901396-73901396|C/T|missense_variant', 'ACTA1|p.P40H|1|0.23|ENSG00000143632|chr1:229432997-229432997|G/T|missense_variant', 'ENSG00000075624|ENST00000646664|ACTB', 'ENSG00000184009|ENST00000573283|ACTG1', 'ENSG00000196834|ENST00000451531|POTEI', 'ENSG00000222038|ENST00000409602|POTEJ', 'nc|ENSG00000204434|Q9BYX7|POTEKP', 'ENSG00000159251|ENST00000290378|ACTC1', 'ENSG00000143632|ENST00000366684|ACTA1', 'ENSG00000163017|ENST00000345517|ACTG2', 'ENSG00000107796|ENST00000224784|ACTA2', 'ENST00000480297.5_1_10:90700968-90708687:-|nuORF', 'ENST00000488967.5_1_10:90706975-90712518:-|nuORF', 'ENST00000473016.1_1_2:74120109-74129648:+|nuORF', 'ENSG00000196604|ENST00000409914|POTEF', 'ENST00000477812.1_1_7:5569027-5569288:-|nuORF', 'nc|ENSG00000163017|P63267-2|ACTG2'] 34022 25471 GNKVVRNPII True PC9_epitope_Rep1 1108.67167695324 1108.6705699358602 102.96 2 -1.7101910232575643 0.43013504866466845 1.0 ['chr7:97969845-97973092|242|11.15|0.0|20.09|-|0|TE_info:FLAM_C,FLAM_C_dup9538,Alu,SINE,donor,-,97973092,97973175|CCZ1P1,None|2'] 96593 2868 SELVEELPAE True NCI_RA007_Epitope_Rep1 1114.5393849406598 1114.5382899358601 14.98 2 -1.7103477842994304 0.43013504866466845 1.0 ['ENSG00000005884|ENST00000320031|ITGA3', 'ENST00000505306.5_1_17:48154319-48165696:+|nuORF', 'nc|ENSG00000005884|P26006-1|ITGA3'] 127699 24106 VRGWLKGL True PC9_epitope_Rep1 927.5654209795499 927.56432993586 97.537 2 -1.710368393104303 0.43013504866466845 1.0 ['OTOF|p.Q1769L|1|0.25|ENSG00000115155|chr2:26461923-26461923|T/A|missense_variant'] 42371 4452 IENELEDPAI True NCI_RA007_Epitope_Rep2 1141.55028397753 1141.54918993586 21.95 2 -1.71056677576532 0.43018622245669963 1.0 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1', 'ENST00000449048.2_1_9:131207010-131207196:+|nuORF'] 71435 9300 MIRGCGGG True NCI_RA007_Epitope_Rep5 749.3312642644099 749.33016993586 42.417 2 -1.710598533889359 0.43018622245669963 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 119036 6801 VEGILEHTL True NCI_RA007_Epitope_Rep4 1009.5444107514501 1009.54330993586 32.785 2 -1.71066461035398 0.43018622245669963 1.0 ['ENSG00000174231|ENST00000304992|PRPF8', 'ENST00000573681.1_1_17:1563133-1564615:-|nuORF', 'ENST00000572445.1_1_17:1564285-1564453:-|nuORF', 'PITPNA-PRPF8|1|fusion'] 82167 6399 PTEDNDLSR True PC9_epitope_Rep4 1045.46761698273 1045.4665099358601 31.705 2 -1.710673727537481 0.43018622245669963 1.0 ['ENSG00000083093|ENST00000261584|PALB2'] 793 3996 ACERAKST True PC9_epitope_Rep5 864.4123510360799 864.41180496793 20.449 1 -1.7107816114004948 0.43018622245669963 1.0 ['ENST00000425843.1_1_X:120337800-120338163:-|nuORF'] 24787 25314 FCDVHPVL True NCI_RA007_Epitope_Rep5 928.4476739156399 928.44656993586 104.9 2 -1.7108609490275835 0.43018622245669963 1.0 ['ENSG00000176567|ENST00000320048|OR4X1', 'OR4S2|p.V269Wfs*12|1|0.23|ENSG00000174982|chr11:55651707-55651707|G/-|frameshift_variant', 'ENSG00000174982|ENST00000641692|OR4S2'] 72954 3676 NCIHPGFT True PC9_epitope_Rep3 887.39597269595 887.39486993586 19.248 2 -1.710903018662499 0.43018622245669963 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 85220 6675 QKKAQSEA True H1975_Epitope_Rep1 888.4664947839199 888.46538993586 30.728 2 -1.7111603954338983 0.43018622245669963 1.0 ['ENST00000606621.1_1_6:85472927-85473008:-|nuORF'] 54608 4606 LADGNQELFP True NCI_RA007_Epitope_Rep5 1102.5294889632999 1102.52838993586 24.389 2 -1.7112561264611925 0.43019901446867737 1.0 ['ENSG00000118491|ENST00000237275|ZC2HC1B'] 129697 6371 VTISSNNR True NCI_RA007_Epitope_Rep3 889.4617437566501 889.46064993586 32.062 2 -1.7113130001821413 0.43019901446867737 1.0 ['ENSG00000176390|ENST00000324238|CRLF3', 'nc|ENSG00000176390|Q8IUI8-2|CRLF3'] 49567 22515 KKKEKKKSGRV True H1975_Epitope_Rep3 1314.8459529171 1314.84430490379 94.108 3 -1.7114749966012388 0.43021976788560395 1.0 ['ENST00000481407.5_1_7:92207439-92210911:-|nuORF'] 58839 16206 LFRMLIRLL True PC9_epitope_Rep6 1173.74200544253 1173.7403549037901 74.691 3 -1.7115136114648626 0.43021976788560395 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 36733 14297 GVNPDGSP True NCI_RA007_Epitope_Rep3 741.32933260477 741.32878496793 63.558 1 -1.71154365238726 0.43021976788560395 1.0 ['ENSG00000151461|ENST00000357604|UPF2'] 131649 12519 VWFPGGAF True NCI_RA007_Epitope_Rep5 879.4279244472298 879.42682993586 54.81 2 -1.7115484145949835 0.43021976788560395 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A', 'nc|ENSG00000159398|Q6NT32-3|CES5A', 'ENST00000543561.1_1_16:67034544-67038818:+|nuORF', 'nc|ENSG00000172824|Q5XG92-7|CES4A', 'nc|ENSG00000172824|Q5XG92-6|CES4A', 'nc|ENSG00000172824|Q5XG92-5|CES4A', 'nc|ENSG00000172824|Q5XG92-8|CES4A', 'nc|ENSG00000172824|Q5XG92-2|CES4A', 'ENSG00000172824|ENST00000648724|CES4A'] 10760 23687 CYGGIKKG True PC9_epitope_Rep3 824.4214591678 824.42036993586 96.398 2 -1.711589233381239 0.43021976788560395 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'ENST00000511489.1_1_5:127701040-127712520:-|nuORF'] 104913 6158 STFQVFQE True PC9_epitope_Rep2 984.4552613938798 984.45416993586 29.08 2 -1.7116628182572144 0.4302213342911017 1.0 ['ENSG00000165338|ENST00000298068|HECTD2'] 10282 21573 CGMNFSWS True NCI_RA007_Epitope_Rep4 930.3364092145 930.33530993586 93.532 2 -1.7116995000146353 0.4302213342911017 1.0 ['ENSG00000196652|ENST00000326775|ZKSCAN5'] 125528 9955 VLVVSAAL True NCI_RA007_Epitope_Rep2 770.4901903506199 770.48908993586 43.349 2 -1.7117737087115925 0.43023895305116894 1.0 ['ENST00000321930.4_17:78977795-78978311:+|nuORF'] 92907 20156 RRPGLRPEL True NCI_RA007_Epitope_Rep5 1092.651610215 1092.65050993586 84.476 2 -1.7118300048755282 0.4302405189732769 1.0 ['ENST00000440364.6_1_5:153826115-153832963:+|nuORF', 'ENST00000426761.2_1_5:153826115-153833002:+|nuORF', 'ENST00000297109.10_1_5:153825644-153830670:+|nuORF'] 101894 24777 SPLHPALA True H1975_Epitope_Rep2 804.4493881678 804.4488349679301 101.87 1 -1.7118443656888398 0.4302405189732769 1.0 ['nc|ENSG00000198715|Q8WWB7-2|GLMP', 'ENSG00000198715|ENST00000362007|GLMP'] 74932 12678 NLSYDERSI True PC9_epitope_Rep5 1095.51965255559 1095.5185499358602 53.772 2 -1.712107652007335 0.43028058361391697 1.0 ['nc|ENSG00000048028|Q96RU2-2|USP28', 'nc|ENSG00000048028|Q96RU2|USP28', 'ENSG00000048028|ENST00000696973|USP28', 'ENST00000540438.5_1_11:113669964-113691034:-|nuORF'] 134991 24970 YAGFHVAL True PC9_epitope_Rep3 876.4493881678 876.44828993586 101.4 2 -1.7122775515225608 0.4302885424733174 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 138508 25490 YRKEIKPPFK True NCI_RA007_Epitope_Rep5 1304.7604919576395 1304.75938993586 105.58 2 -1.7123351644098421 0.4302885424733174 1.0 ['PDE10A-RPS6KA2|1|fusion', 'ENSG00000071242|ENST00000265678|RPS6KA2', 'nc|ENSG00000071242|Q15349-3|RPS6KA2', 'nc|ENSG00000071242|Q15349-2|RPS6KA2', 'ENST00000491836.2_1_6:166853785-166873036:-|nuORF'] 68932 26614 LVFRKPRGLFI True NCI_RA007_Epitope_Rep5 1344.8394109846797 1344.83776490379 110.03 3 -1.7123477865136942 0.4302885424733174 1.0 ['nc|ENSG00000065833|P48163-2|ME1', 'ENSG00000065833|ENST00000369705|ME1'] 118352 10998 VDFVLLGSS True PC9_epitope_Rep1 935.4963979298699 935.49530993586 47.192 2 -1.712501009240157 0.43031738193571556 1.0 ['ENST00000296674.12_1_5:81573566-81574204:-|nuORF'] 118564 4872 VEAAAASAISV True H1975_Epitope_Rep1 987.5236753068699 987.52256993586 23.818 2 -1.7127091884765104 0.430347784124704 1.0 ['ENSG00000149131|ENST00000278407|SERPING1', 'nc|ENSG00000149131|P05155-3|SERPING1', 'ENST00000528996.1_1_11:57374185-57382051:+|nuORF', 'nc|ENSG00000149131|P05155-2|SERPING1'] 75220 23328 NPHFRPKIMR True PC9_epitope_Rep3 1294.7080795452998 1294.70698993586 95.01 2 -1.7127749163671382 0.430347784124704 1.0 ['nc|ENSG00000204618|Q9H2S5-3|RNF39'] 71831 26422 MPEWLTLQ True PC9_epitope_Rep1 1016.50010341132 1016.49900993586 107.19 2 -1.7127925378013793 0.430347784124704 1.0 ['ENST00000511895.1_1_4:80132856-80148416:+|nuORF'] 25715 6996 FFIYLYQRWIY True H1975_Epitope_Rep1 1610.82857151746 1610.8269149037899 31.947 3 -1.7130585539819803 0.43039906630156666 1.0 ['nc|ENSG00000104853|O96005-3|CLPTM1', 'nc|ENSG00000104853|O96005-4|CLPTM1', 'ENSG00000104853|ENST00000337392|CLPTM1', 'ENST00000586915.1_1_19:45495538-45496152:+|nuORF'] 59855 3879 LHFYFLMQR True H1975_Epitope_Rep2 1253.6379342968098 1253.63629490379 19.961 3 -1.7130893096140307 0.4304054584834304 1.0 ['ENST00000377126.3_1_9:73001619-73001904:-|nuORF'] 42899 23177 IFVFMFPL True H1975_Epitope_Rep1 1012.5455970517598 1012.54448993586 96.354 2 -1.7136653632550143 0.4304823035662185 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 21933 8100 ESIHSPTP True PC9_epitope_Rep2 866.4133965819 866.41228993586 36.515 2 -1.7137338129115955 0.4304823035662185 1.0 ['nc|nan|Q49A92-3|C8orf34', 'nc|nan|Q49A92-2|C8orf34', 'ENSG00000165084|ENST00000518698|C8orf34', 'ENST00000521406.5_1_8:69442879-69730478:+|nuORF'] 79362 25408 PGKRYLQVSK True PC9_epitope_Rep5 1174.6822416369398 1174.68114993586 102.96 2 -1.7137458349531054 0.4304823035662185 1.0 ['ENSG00000107815|ENST00000311916|TWNK'] 49490 25047 KKAAKPSVPK True PC9_epitope_Rep1 1052.67061432408 1052.66950993586 101.26 2 -1.7137668671789419 0.4304823035662185 1.0 ['ENSG00000184897|ENST00000333762|H1-10'] 53260 26217 KTGKKGKG True PC9_epitope_Rep5 802.5024863698198 802.50138993586 106.6 2 -1.71377793020776 0.4304823035662185 1.0 ['ENSG00000137077|ENST00000259607|CCL21'] 63569 14828 LPLHPARAA True PC9_epitope_Rep1 944.5555845718399 944.55448993586 61.855 2 -1.7138710423082242 0.43050615441580736 1.0 ['ENST00000435359.5_1_17:2592883-2592961:-|nuORF'] 116697 19131 TYKADYLPWN True PC9_epitope_Rep3 1269.6029882567298 1269.60188993586 78.809 2 -1.7138797820546499 0.43050615441580736 1.0 ['ENSG00000155875|ENST00000380534|SAXO1'] 34066 18871 GNRLRAELGR True NCI_RA007_Epitope_Rep5 1140.64758746372 1140.64648993586 79.431 2 -1.7140090099116172 0.43050615441580736 1.0 ['ENSG00000176155|ENST00000694881|CCDC57'] 5830 16055 APGCRKGW True H1975_Epitope_Rep3 873.4279415305698 873.42739496793 67.213 1 -1.7140597810725102 0.43050615441580736 1.0 ['ENST00000564313.1_1_16:2141057-2141975:-|nuORF'] 64321 4412 LQMYISLTI True H1975_Epitope_Rep3 1080.58891841572 1080.58782993586 22.093 2 -1.7141108136462588 0.43050615441580736 1.0 ['ENSG00000172967|ENST00000684488|XKR3'] 66459 10254 LSRQWIVSH True NCI_RA007_Epitope_Rep2 1124.60907669668 1124.6079699358602 44.479 2 -1.714133585953378 0.43050615441580736 1.0 ['ENSG00000173239|ENST00000404743|LIPM'] 14581 10484 DVGGQKSL True PC9_epitope_Rep2 802.4184819623399 802.41738993586 45.647 2 -1.7141341998928041 0.43050615441580736 1.0 ['ENSG00000213465|ENST00000246747|ARL2', 'nc|ENSG00000213465|P36404-2|ARL2', 'ENST00000524585.1_1_11:64781679-64786448:+|nuORF'] 67458 9026 LTEEARKAY True H1975_Epitope_Rep2 1079.56112344475 1079.56002993586 39.67 2 -1.7141637707394044 0.43050615441580736 1.0 ['SECISBP2L|p.A823Qfs*12|1|0.13|ENSG00000138593|chr15:48996524-48996524|A/-|frameshift_variant', 'ENSG00000138593|ENST00000559471|SECISBP2L', 'nc|ENSG00000138593|Q93073-2|SECISBP2L'] 23044 16775 EVKPLLFDHLA True NCI_RA007_Epitope_Rep1 1280.71287305888 1280.71176993586 69.378 2 -1.7143261082123646 0.43050615441580736 1.0 ['nc|ENSG00000102384|Q92674-2|CENPI', 'ENSG00000102384|ENST00000682095|CENPI'] 120668 9208 VGAPGEGA True H1975_Epitope_Rep1 656.31295426464 656.3124049679301 40.326 1 -1.7143537171887169 0.43051254432027286 1.0 ['ENSG00000142409|ENST00000610935|ZNF787'] 80109 25418 PKGTTILTSLT True PC9_epitope_Rep5 1130.65468947642 1130.65358993586 103.0 2 -1.7146674060036853 0.43053015427769986 1.0 ['ENSG00000165841|ENST00000371321|CYP2C19'] 61937 3925 LLLLYFYFWRQ True NCI_RA007_Epitope_Rep2 1560.84930696204 1560.84709987172 19.903 4 -1.7149818259021319 0.4305331179321486 1.0 ['AluJo_dup31358|chr7:139036456-139036762:-|1.0349885509042276|0.2549609110980715|2.02|499.0|14|2|anti-sense'] 65493 8335 LSFPELEVTW True H1975_Epitope_Rep1 1219.6124903112698 1219.6113899358602 36.992 2 -1.715019566684573 0.4305331179321486 1.0 ['ENST00000520537.1_1_17:78388994-78389705:+|nuORF'] 80986 23110 PNLEDIYTSLC True H1975_Epitope_Rep3 1266.5802042068199 1266.57856490379 96.516 3 -1.7150304352442056 0.4305331179321486 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 38448 21227 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 87.852 2 -1.7151020705312643 0.4305331179321486 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 80108 25490 PKGTTILTSLT True PC9_epitope_Rep1 1130.65468947642 1130.65358993586 103.04 2 -1.715118749056546 0.4305331179321486 1.0 ['ENSG00000165841|ENST00000371321|CYP2C19'] 43540 6730 IIDYGVGS True PC9_epitope_Rep1 822.4123339527399 822.41122993586 30.692 2 -1.7152419145126276 0.4305331179321486 1.0 ['DCC|p.G761D|1|0.28|ENSG00000187323|chr18:53339830-53339830|G/A|missense_variant'] 99954 21587 SLIIAYHTREV True PC9_epitope_Rep5 1300.7139356880402 1300.71282993586 88.074 2 -1.7152529412411606 0.4305331179321486 1.0 ['KCNN3|p.G332S|1|0.14|ENSG00000143603|chr1:154822124-154822124|C/T|missense_variant'] 111907 24702 TLRRTYKK True NCI_RA007_Epitope_Rep5 1064.6454622053998 1064.6443699358601 102.5 2 -1.7153303066813024 0.4305331179321486 1.0 ['TCEAL5|p.K47Rfs*94|1|0.46|ENSG00000204065|chrX:103274426-103274426|C/-|frameshift_variant'] 78776 19713 PEKFQLNQHRR True H1975_Epitope_Rep3 1451.7745788819898 1451.7734899358602 82.554 2 -1.715345993100467 0.4305331179321486 1.0 ['SENP5|p.K215E|1|0.09|ENSG00000119231|chr3:196885824-196885824|A/G|missense_variant'] 133414 20748 WFVLTIIFITG True PC9_epitope_Rep6 1308.7481959384397 1308.7465649037902 92.566 3 -1.7153532729085552 0.4305331179321486 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2'] 79646 24256 PHGAPHSD True PC9_epitope_Rep4 816.3514650316802 816.35036993586 101.78 2 -1.715396254423473 0.4305331179321486 1.0 ['nc|ENSG00000248290|Q16473|TNXA'] 113533 18979 TQTRELLQPM True PC9_epitope_Rep5 1215.62815745875 1215.6270699358602 78.028 2 -1.7155876107011585 0.43053950660219664 1.0 ['ENSG00000179270|ENST00000331664|PCARE', 'PCARE|p.R571Gfs*11|1|0.15|ENSG00000179270|chr2:29072552-29072552|C/-|frameshift_variant'] 10252 21262 CFVEFGAGK True NCI_RA007_Epitope_Rep5 956.4425885351998 956.44148993586 88.828 2 -1.7156787632392734 0.4305410650781364 1.0 ['ENST00000482437.5_1_1:100606401-100609704:+|nuORF', 'ENSG00000122435|ENST00000370141|TRMT13'] 55873 8988 LDFRPRQFV True NCI_RA007_Epitope_Rep1 1176.6403768249597 1176.63874490379 38.962 3 -1.7156926156545018 0.4305410650781364 1.0 ['ENSG00000162878|ENST00000294964|PKDCC'] 115339 4945 TVEDIHVSHHY True NCI_RA007_Epitope_Rep2 1335.62076357919 1335.6196699358602 23.855 2 -1.7158732799471146 0.4306035449854162 1.0 ['ST8SIA6|p.P354H|1|0.58|ENSG00000148488|chr10:17321014-17321014|G/T|missense_variant'] 104708 14024 STCVLEFEM True PC9_epitope_Rep5 1057.4460192331298 1057.44492993586 58.961 2 -1.7159188752825827 0.43060510197213436 1.0 ['PCDHGB3|p.L668Ffs*7|1|0.34|ENSG00000262209|chr5:141372395-141372396|-/T|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 56890 7124 LEDNTFMTLW True NCI_RA007_Epitope_Rep1 1268.57472490356 1268.57362993586 31.701 2 -1.7159303410696976 0.43060510197213436 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 126887 12821 VPTRRPPA True PC9_epitope_Rep2 892.5242844435598 892.52318993586 54.617 2 -1.7160610080938452 0.4306339252661454 1.0 ['CLEC14A|p.K422Nfs*43|1|0.35|ENSG00000176435|chr14:38254757-38254757|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A', 'CLEC14A|p.T299I|1|0.43|ENSG00000176435|chr14:38255127-38255127|G/A|missense_variant', 'CLEC14A|p.A310E|1|0.26|ENSG00000176435|chr14:38255094-38255094|G/T|missense_variant'] 42473 6739 IEQSSQAY True H1975_Epitope_Rep2 924.4188758851599 924.41776993586 30.836 2 -1.7163130342446693 0.43065791687699817 1.0 ['nc|ENSG00000173093|Q8NA47-2|CCDC63', 'TCTN1-CCDC63|2|fusion', 'TCTN1-CCDC63|3|fusion', 'ENSG00000173093|ENST00000308208|CCDC63', 'TCTN1-CCDC63|1|fusion'] 18504 21531 EKPFALFL True PC9_epitope_Rep6 963.5429541994698 963.5424049679301 95.691 1 -1.7163914071452913 0.43065791687699817 1.0 ['ENSG00000176058|ENST00000409012|TPRN', 'nc|ENSG00000176058|Q4KMQ1-2|TPRN', 'nc|ENSG00000176058|Q4KMQ1-4|TPRN', 'nc|ENSG00000176058|Q4KMQ1-3|TPRN', 'ENST00000477345.1_1_9:140086566-140087185:-|nuORF'] 27077 6390 FLPPAPAA True NCI_RA007_Epitope_Rep3 782.4326754744999 782.43156993586 32.139 2 -1.7164484603160508 0.4306594725565639 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 131285 11541 VVQNGPTA True NCI_RA007_Epitope_Rep5 784.40791727864 784.40682993586 51.042 2 -1.7164509491708777 0.4306594725565639 1.0 ['ENST00000524591.6_1_8:12878711-12878915:+|nuORF'] 135941 9908 YEWWFRWRLDR True NCI_RA007_Epitope_Rep2 1711.8371791385496 1711.8360899358602 43.166 2 -1.7164879819492818 0.4306674144699944 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 53355 12755 KTTQFIMFETF True NCI_RA007_Epitope_Rep1 1391.6795243252698 1391.67842993586 53.6 2 -1.7165223595273338 0.4306674144699944 1.0 ['ENST00000403258.1_1_6:88986231-88986483:-|nuORF'] 33990 7548 GNGGVLKN True H1975_Epitope_Rep3 757.40825163181 757.40714993586 34.015 2 -1.7165436396857827 0.4306674144699944 1.0 ['ENSG00000064225|ENST00000483910|ST3GAL6'] 109107 7518 TFGGLGSL True PC9_epitope_Rep5 750.39120458534 750.39010993586 33.868 2 -1.716730403649515 0.4307186683267714 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 44900 10550 IQDLLELSPPE True H1975_Epitope_Rep3 1252.6550833992399 1252.6539899358602 45.648 2 -1.7168135930562944 0.43072505384063176 1.0 ['ENSG00000184575|ENST00000332707|XPOT', 'ENST00000449426.1_1_7:56356827-56358135:+|nuORF'] 45200 19996 IRKEQEVQRSK True NCI_RA007_Epitope_Rep5 1399.78956023979 1399.78792490379 83.831 3 -1.7169763798875128 0.4307554259435814 1.0 ['nc|ENSG00000158423|Q8N443-3|RIBC1', 'ENSG00000158423|ENST00000375327|RIBC1'] 117857 13112 VAPETRAVI True PC9_epitope_Rep6 954.5498304850598 954.54872993586 62.054 2 -1.7170347513925643 0.4307554259435814 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 9270 6438 AVRCCKLP True PC9_epitope_Rep1 888.4673638143998 888.4668149679301 29.571 1 -1.7170464408410169 0.4307554259435814 1.0 ['ENSG00000180044|ENST00000326474|C3orf80'] 22258 5253 ETDQHIEFFWG True NCI_RA007_Epitope_Rep1 1407.6095301891496 1407.6084299358602 24.515 2 -1.7171935271764824 0.4308066759388039 1.0 ['ENST00000547085.1_1_12:112600816-112607652:-|nuORF', 'HECTD4|p.D4368Rfs*44|1|0.12|ENSG00000173064|chr12:112163055-112163056|-/G|frameshift_variant', 'ENSG00000173064|ENST00000682272|HECTD4', 'nc|ENSG00000173064|Q9Y4D8-4|HECTD4', 'nc|ENSG00000173064|Q9Y4D8|HECTD4'] 85913 13296 QNRRMKWKRSK True NCI_RA007_Epitope_Rep2 1516.85211801004 1516.8510299358602 56.355 2 -1.7172262277666426 0.4308082280894592 1.0 ['ENSG00000130675|ENST00000252971|MNX1', 'nc|ENSG00000130675|P50219-2|MNX1'] 66717 17997 LSTLTSWPR True PC9_epitope_Rep4 1059.57129420563 1059.57077496793 77.283 1 -1.7172426358301225 0.4308082280894592 1.0 ['CHD1|p.Q546P|1|0.3|ENSG00000153922|chr5:98896299-98896299|T/G|missense_variant'] 51833 16344 KKKRIIYDS True NCI_RA007_Epitope_Rep4 1149.6869926642098 1149.6853349037901 70.863 3 -1.7173446294934547 0.43082582801511904 1.0 ['nc|ENSG00000035928|P35251|RFC1', 'ENSG00000035928|ENST00000349703|RFC1', 'ENST00000504849.5_1_4:39324953-39367861:-|nuORF'] 72976 13045 NCTASQFRCK True NCI_RA007_Epitope_Rep3 1156.51174780752 1156.51064993586 58.588 2 -1.7174597656686252 0.43083823941687693 1.0 ['ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.R3361Lfs*17|1|0.24|ENSG00000168702|chr2:140444655-140444656|-/A|frameshift_variant', 'LRP1B|p.P3359Qfs*54|1|0.29|ENSG00000168702|chr2:140444661-140444661|G/-|frameshift_variant', 'LRP1B|p.S3315F|1|0.33|ENSG00000168702|chr2:140456474-140456474|G/A|missense_variant', 'LRP1B|p.S3315C|2|0.74|ENSG00000168702|chr2:140456474-140456474|G/C|missense_variant'] 22428 22899 ETFRPKRGAA True H1975_Epitope_Rep1 1131.6148903531098 1131.61324490379 95.23 3 -1.7174752038924561 0.43083823941687693 1.0 ['ENST00000374791.7_1_11:132205045-132205564:+|nuORF'] 78972 4602 PFKHDVFLLE True PC9_epitope_Rep5 1243.6601092100298 1243.6584749037902 22.76 3 -1.7174954546127357 0.43083823941687693 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 14454 6354 DTPVPASSHHL True PC9_epitope_Rep4 1159.5621860739102 1159.56108993586 31.518 2 -1.7176247811931078 0.43083823941687693 1.0 ['DOCK4|p.Q196P|1|0.23|ENSG00000128512|chr7:111977246-111977246|T/G|missense_variant'] 53287 22701 KTKGAGGG True PC9_epitope_Rep2 674.3711378470998 674.3705849679301 92.815 1 -1.7176652542296573 0.43083823941687693 1.0 ['ENST00000585091.1_1_17:79977515-79980737:-|nuORF'] 58502 23444 LEYVRAFLKH True PC9_epitope_Rep3 1274.7135417652198 1274.7124499358601 95.454 2 -1.7177222361631137 0.43083823941687693 1.0 ['nc|ENSG00000166912|Q9NXD2-2|MTMR10', 'ENSG00000166912|ENST00000435680|MTMR10', 'ENST00000567567.5_1_15:31233675-31258111:-|nuORF', 'ENST00000568547.5_1_15:31233444-31253097:-|nuORF', 'ENST00000565728.5_1_15:31239263-31253097:-|nuORF', 'ENST00000568604.5_1_15:31235080-31253097:-|nuORF'] 29429 9625 FVGGLYGG True PC9_epitope_Rep5 768.3806399016398 768.37954993586 41.988 2 -1.7178110549621826 0.43083823941687693 1.0 ['ENST00000438179.1_1_10:17619435-17619498:+|nuORF'] 107675 5618 TAKDPNTYKV True H1975_Epitope_Rep2 1135.5873381925899 1135.58624993586 26.609 2 -1.717991288618527 0.43083823941687693 1.0 ['ENSG00000197594|ENST00000647893|ENPP1', 'ENPP1|p.I889Sfs*24|1|0.15|ENSG00000197594|chr6:131890396-131890396|G/-|frameshift_variant'] 106269 10515 SVQLLYSRV True PC9_epitope_Rep6 1063.60259433391 1063.6014899358602 51.234 2 -1.7181272827395282 0.43083823941687693 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 64273 20214 LQLKEKKREKT True NCI_RA007_Epitope_Rep5 1399.8510978671898 1399.85000993586 84.694 2 -1.7181448144056282 0.43083823941687693 1.0 ['nc|ENSG00000091656|Q86UP3-3|ZFHX4', 'ENST00000458716.2_1_8:77616323-77620415:+|nuORF'] 121557 12925 VGKQVEYAK True NCI_RA007_Epitope_Rep5 1020.5603951687599 1020.55928993586 56.398 2 -1.718297557725309 0.43083823941687693 1.0 ['ENSG00000204271|ENST00000374919|SPIN3', 'ENSG00000106723|ENST00000375859|SPIN1'] 10726 17001 CVKIKKCIIM True NCI_RA007_Epitope_Rep4 1177.67491405249 1177.6738099358602 73.672 2 -1.7183113663218297 0.43083823941687693 1.0 ['nc|ENSG00000133703|P01116|KRAS'] 100670 13671 SLQVQRQVP True PC9_epitope_Rep4 1053.59309227937 1053.59198993586 60.477 2 -1.7183437764998428 0.43083823941687693 1.0 ['nc|ENSG00000161643|A6NMB1|SIGLEC16', 'nc|ENSG00000161640|Q96RL6-2|SIGLEC11', 'ENSG00000161640|ENST00000447370|SIGLEC11'] 137307 8974 YLHLPDLG True NCI_RA007_Epitope_Rep5 926.4861675993399 926.48506993586 41.176 2 -1.718405282601036 0.43083823941687693 1.0 ['ENSG00000147912|ENST00000432825|FBXO10'] 48084 25355 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 105.03 3 -1.7184140458303339 0.43083823941687693 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 74477 16894 NKKAAPRA True H1975_Epitope_Rep1 854.5086343794198 854.50752993586 70.394 2 -1.7184346213293569 0.43083823941687693 1.0 ['ENST00000568570.1_1_16:31993258-32005419:+|nuORF', 'nc|ENSG00000275832|Q9P227-2|ARHGAP23', 'ENSG00000275832|ENST00000622683|ARHGAP23'] 10249 22621 CFRTRSHS True NCI_RA007_Epitope_Rep5 992.4610325639999 992.45992993586 94.193 2 -1.7184883947736351 0.43083979052894805 1.0 ['nc|ENSG00000198010|Q9P1A6-3|DLGAP2', 'nc|ENSG00000198010|Q9P1A6-2|DLGAP2', 'nc|ENSG00000198010|Q9P1A6|DLGAP2', 'ENSG00000198010|ENST00000637795|DLGAP2', 'DLGAP2|p.V756Cfs*63|1|0.37|ENSG00000198010|chr8:1676593-1676593|G/-|frameshift_variant'] 56215 6409 LDPLLPGG True NCI_RA007_Epitope_Rep2 780.4381547777599 780.43704993586 29.537 2 -1.7185056740591085 0.43083979052894805 1.0 ['ENST00000252818.4_1_19:18390620-18391193:-|nuORF'] 91240 23739 RLRTRLEREL True PC9_epitope_Rep1 1340.80006535384 1340.79841490379 96.105 3 -1.718555160982026 0.43084617282289356 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 85845 20592 QNAITCGF True H1975_Epitope_Rep2 852.37998827864 852.37888993586 85.299 2 -1.7186232342014856 0.43085255497370456 1.0 ['ENST00000555208.1_1_14:77795315-77795561:+|nuORF', 'ENST00000553431.5_1_14:77787511-77795561:+|nuORF', 'nc|ENSG00000100577|O43708-2|GSTZ1', 'nc|ENSG00000100577|O43708-3|GSTZ1', 'ENST00000555093.1_1_14:77794152-77797535:+|nuORF', 'nc|ENSG00000100577|O43708|GSTZ1', 'ENSG00000100577|ENST00000216465|GSTZ1'] 12924 11737 DLNEVKARV True PC9_epitope_Rep1 1042.5771078620598 1042.5760099358602 50.02 2 -1.7187341972489991 0.4308541056951593 1.0 ['ENSG00000108055|ENST00000361804|SMC3', 'SMC3|p.D681Mfs*9|1|0.2|ENSG00000108055|chr10:110596475-110596475|G/-|frameshift_variant'] 16605 20028 EERRRVRRERN True PC9_epitope_Rep4 1554.8563514433397 1554.85524993586 85.174 2 -1.7187371357660046 0.4308541056951593 1.0 ['ENSG00000175592|ENST00000312562|FOSL1'] 43113 22932 IGMKGIGW True PC9_epitope_Rep2 860.4578446765199 860.45674993586 93.713 2 -1.718769222519661 0.43085565634706163 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 113823 5162 TRECGNEFAY True H1975_Epitope_Rep2 1188.4869725283197 1188.4853249037901 24.934 3 -1.7187781464158225 0.43085565634706163 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A'] 137751 13090 YNLYIVENPHY True PC9_epitope_Rep2 1423.6772158261501 1423.67610993586 55.627 2 -1.7189658603162217 0.430862038033728 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 61367 17195 LLEHSHHL True PC9_epitope_Rep4 984.5141136826801 984.5130099358599 74.147 2 -1.719190807676231 0.43086841957728317 1.0 ['ENSG00000171084.15,FAM86JP,chr3,+,I4.1,125922566,125923663|78|5.31|2|intron', 'ENSG00000171084.15,FAM86JP,chr3,+,I4.1,125922566,125923663|78|5.31|1|intron', 'ENSG00000171084.15,FAM86JP,chr3,+,I4.1,125922566,125923663|78|5.31|3|intron'] 81723 15742 PSAGDVEK True NCI_RA007_Epitope_Rep1 801.38684748089 801.3862949679301 65.328 1 -1.7193304349219987 0.43088601349987665 1.0 ['ENSG00000025772|ENST00000372813|TOMM34'] 24720 8978 FAWGYADLSC True NCI_RA007_Epitope_Rep4 1131.46953155903 1131.46842993586 41.369 2 -1.719718497286615 0.4308923946315046 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3'] 126491 12690 VPMTPGTF True PC9_epitope_Rep6 848.4102257777599 848.4096749679301 60.289 1 -1.7198171632074715 0.43089394432048794 1.0 ['nc|ENSG00000109458|Q13480-2|GAB1', 'ENSG00000109458|ENST00000262994|GAB1'] 85925 8762 QNTEKFMAK True H1975_Epitope_Rep2 1095.5382798251899 1095.5371899358602 38.666 2 -1.719825992744226 0.43089394432048794 1.0 ['nc|ENSG00000075292|Q14966-3|ZNF638', 'ENSG00000075292|ENST00000264447|ZNF638', 'nc|ENSG00000075292|Q14966-5|ZNF638'] 55635 6010 LDADPVQPGI True H1975_Epitope_Rep3 1023.5236753068698 1023.5225699358599 28.13 2 -1.7198461280585673 0.4308954939399715 1.0 ['ENST00000541565.5_1_1:210761328-210796973:+|nuORF'] 90020 23778 RGFIRHLG True NCI_RA007_Epitope_Rep4 954.55116789774 954.55006993586 103.08 2 -1.7198548771267426 0.4308954939399715 1.0 ['ENST00000420498.1_1_1:161123670-161129115:-|nuORF'] 126245 17621 VPGYQGVN True H1975_Epitope_Rep1 832.4079172786398 832.40682993586 73.32 2 -1.7198878378755553 0.4309018746075881 1.0 ['ENSG00000134250|ENST00000256646|NOTCH2', 'ENST00000478864.1_1_1:120478044-120480072:-|nuORF'] 118866 7682 VEELKNAIH True H1975_Epitope_Rep2 1051.56620882519 1051.5651099358602 34.501 2 -1.7199978000246683 0.43090342399712983 1.0 ['nc|ENSG00000150676|Q8IWF9-3|CCDC83', 'ENSG00000150676|ENST00000342404|CCDC83', 'nc|ENSG00000150676|Q8IWF9-2|CCDC83'] 67634 19262 LTEYRSYNP True PC9_epitope_Rep1 1141.5403880001697 1141.53928993586 78.893 2 -1.71999994102377 0.43090342399712983 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 126186 20296 VPGGIREE True NCI_RA007_Epitope_Rep1 855.4450310633499 855.4444849679301 83.155 1 -1.720122327609195 0.43092101575200403 1.0 ['ENST00000591326.5_1_19:2078652-2090082:-|nuORF'] 20196 12373 ENSPTINEPK True NCI_RA007_Epitope_Rep1 1127.54586730343 1127.54527496793 52.102 1 -1.7203833656359453 0.4309786203571869 1.0 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 134767 14964 WYAFEQYGMYR True NCI_RA007_Epitope_Rep3 1512.6496211793199 1512.64852993586 66.303 2 -1.720393882554 0.4309786203571869 1.0 ['ZNF507|p.Y242F|1|0.06|ENSG00000168813|chr19:32353555-32353555|A/T|missense_variant'] 13701 14067 DQGSRGSP True H1975_Epitope_Rep3 802.35694433494 802.3563949679301 59.432 1 -1.7206880162534728 0.4310074216910693 1.0 ['C1QTNF9B|p.P144Lfs*37|1|0.24|ENSG00000205863|chr13:23891862-23891862|C/-|frameshift_variant', 'ENSG00000240654|ENST00000332018|C1QTNF9', 'ENSG00000205863|ENST00000382137|C1QTNF9B'] 11399 23015 DFIVKVLPPV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 94.978 3 -1.7209173414442327 0.43106502242152467 1.0 ['ENSG00000182782|ENST00000328880|HCAR2'] 21247 22250 ERHQLRKH True PC9_epitope_Rep5 1102.6108080321799 1102.60970993586 90.593 2 -1.7209257345853586 0.43106502242152467 1.0 ['nc|ENSG00000124782|Q92766-3|RREB1', 'ENSG00000124782|ENST00000379938|RREB1', 'nc|ENSG00000124782|Q92766-4|RREB1'] 133939 6848 WPFACWRWTAT True PC9_epitope_Rep4 1423.6495616096697 1423.64846993586 33.561 2 -1.7211241282603003 0.43108898903612025 1.0 ['KSR1|p.V605Cfs*25|1|0.15|ENSG00000141068|chr17:27605630-27605630|G/-|frameshift_variant'] 106774 7864 SYFSNAPV True PC9_epitope_Rep1 883.4075829254699 883.40648993586 35.075 2 -1.7211846686189414 0.43108898903612025 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant', 'DHX34|p.S320C|1|0.28|ENSG00000134815|chr19:47355292-47355292|C/G|missense_variant'] 69627 16615 LVVALWGPL True PC9_epitope_Rep2 966.5902387450599 966.58914993586 69.153 2 -1.721588386799352 0.431117787518357 1.0 ['ENST00000571707.1_1_17:79609405-79612656:+|nuORF', 'ENSG00000182612|ENST00000611590|TSPAN10', 'nc|ENSG00000182612|Q9H1Z9|TSPAN10'] 134281 7371 WRSCGWLVASP True H1975_Epitope_Rep2 1260.6073624445198 1260.60677496793 33.292 1 -1.7217519755010593 0.43113691904132007 1.0 ['ENST00000372483.8_1_9:132388465-132394960:+|nuORF'] 101974 19023 SPMTAAAC True NCI_RA007_Epitope_Rep4 750.30404645706 750.3029499358599 82.293 2 -1.7218224596771088 0.43113691904132007 1.0 ['ENSG00000185262|ENST00000327490|UBALD2'] 38049 20248 HELHLYKHEQI True H1975_Epitope_Rep3 1445.74154741821 1445.7404499358602 84.683 2 -1.7219885794481253 0.43113691904132007 1.0 ['ENST00000557001.5_1_14:52037074-52042621:+|nuORF', 'ENST00000557103.5_1_14:52042417-52042621:+|nuORF'] 111437 20792 TLKQSSRLV True PC9_epitope_Rep6 1030.61349337078 1030.6123899358602 92.744 2 -1.7220530758713424 0.4311415504640631 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2'] 63800 8963 LPSPSLPPWLC True H1975_Epitope_Rep3 1208.6263665536 1208.6252699358602 39.471 2 -1.7222755748376084 0.4311415504640631 1.0 ['ENST00000367204.5_1_1:204095788-204096322:+|nuORF'] 11398 22700 DFIVKVLPPV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 93.753 3 -1.722345127933968 0.4311415504640631 1.0 ['ENSG00000182782|ENST00000328880|HCAR2'] 88594 14986 RALLKRRRSDS True NCI_RA007_Epitope_Rep5 1356.80621336344 1356.8051099358602 64.312 2 -1.7223620930602166 0.4311415504640631 1.0 ['SENP2-ANKRD27|1|fusion', 'ENSG00000163904|ENST00000296257|SENP2'] 18186 12636 EIQKTLRDYYE True H1975_Epitope_Rep1 1456.71980891412 1456.71870993586 53.657 2 -1.7224092759492196 0.4311415504640631 1.0 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|72|3|sense'] 89989 18679 RGAVPRPS True NCI_RA007_Epitope_Rep2 838.4773342511401 838.47622993586 77.457 2 -1.7224253976677182 0.4311415504640631 1.0 ['ENST00000292377.3_1_7:99774686-99774926:-|nuORF'] 22666 7446 ETSPLRDL True H1975_Epitope_Rep2 929.4818104948899 929.48070993586 33.586 2 -1.7224862074871572 0.4311430941332078 1.0 ['ENSG00000157551|ENST00000398938|KCNJ15'] 121665 22197 VGLKFMQV True PC9_epitope_Rep2 920.51535955264 920.5148149679301 90.863 1 -1.722499477231649 0.4311430941332078 1.0 ['ENST00000487481.1_1_17:49230988-49233183:+|nuORF', 'ENST00000465188.1_1_17:49231734-49233183:+|nuORF'] 120727 12453 VGASWGSLAPG True NCI_RA007_Epitope_Rep3 1000.4977949121999 1000.49668993586 56.204 2 -1.7225956084353058 0.4311635621903929 1.0 ['ENST00000221566.6_1_19:2754860-2755205:-|nuORF'] 90928 10232 RLEPKDGKGVF True PC9_epitope_Rep5 1244.6877209401998 1244.68662993586 44.346 2 -1.7226192179491975 0.4311635621903929 1.0 ['ENSG00000176170|ENST00000592299|SPHK1', 'nc|ENSG00000176170|Q9NYA1-3|SPHK1', 'nc|ENSG00000176170|Q9NYA1-2|SPHK1'] 97416 18659 SGGCRHRG True H1975_Epitope_Rep2 828.37730294004 828.37620993586 77.441 2 -1.7226784173244791 0.4311635621903929 1.0 ['ENST00000581882.5_1_17:61906863-61906914:+|nuORF'] 79449 6215 PGPLSKQGS True NCI_RA007_Epitope_Rep5 869.46068112749 869.45958993586 30.582 2 -1.7228177054350111 0.4311635621903929 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 45126 4683 IQVLDVNDNP True H1975_Epitope_Rep3 1125.5666027480102 1125.56550993586 23.136 2 -1.722934533464796 0.4311635621903929 1.0 ['ENSG00000197410|ENST00000357232|DCHS2'] 27522 7548 FPGARAVA True PC9_epitope_Rep3 787.4340724568299 787.43296993586 34.032 2 -1.722957834537662 0.4311635621903929 1.0 ['ENST00000602529.1_1_1:228463365-228463719:-|nuORF'] 48736 12237 KEPGVPTT True PC9_epitope_Rep5 827.43888305375 827.43833496793 52.055 1 -1.7229799876976417 0.4311635621903929 1.0 ['ENSG00000116690|ENST00000445192|PRG4', 'nc|ENSG00000116690|Q92954-5|PRG4', 'nc|ENSG00000116690|Q92954-3|PRG4', 'nc|ENSG00000116690|Q92954-6|PRG4', 'nc|ENSG00000116690|Q92954-2|PRG4', 'nc|ENSG00000116690|Q92954-4|PRG4'] 52411 23297 KPGPLRRAH True PC9_epitope_Rep5 1030.6148307834599 1030.6137299358602 94.594 2 -1.723010714924489 0.4311635621903929 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 120401 15991 VFSPDGSY True PC9_epitope_Rep1 870.37594844402 870.3753949679301 66.32 1 -1.723049927957135 0.4311635621903929 1.0 ['DGKD-ATG16L1|2|fusion', 'nc|ENSG00000085978|Q676U5-4|ATG16L1', 'nc|ENSG00000085978|Q676U5-5|ATG16L1', 'nc|ENSG00000085978|Q676U5-2|ATG16L1', 'ENSG00000085978|ENST00000392017|ATG16L1'] 5369 5138 ALTPEQVSFCS True H1975_Epitope_Rep2 1180.54342477528 1180.5423299358602 24.84 2 -1.7230927490978674 0.4311635621903929 1.0 ['SPTA1|p.A2389S|1|0.11|ENSG00000163554|chr1:158611359-158611359|C/A|missense_variant'] 516 21439 AAPLPYSS True PC9_epitope_Rep5 804.4017692690401 804.40066993586 87.522 2 -1.7231353250896084 0.4311635621903929 1.0 ['ENST00000261799.8_1_5:149535034-149535298:-|nuORF'] 15910 10301 EDRHGYIW True PC9_epitope_Rep1 1074.4882928576599 1074.4871899358602 44.507 2 -1.7231552066292624 0.4311635621903929 1.0 ['ENSG00000159069|ENST00000325285|FBXW5', 'ENST00000483559.5_1_9:139835382-139837095:-|nuORF', 'ENST00000459905.5_1_9:139835382-139837220:-|nuORF'] 52909 18600 KRHQRKVP True NCI_RA007_Epitope_Rep2 1047.6413798844699 1047.6402899358602 77.148 2 -1.7232465467626148 0.4311699373508019 1.0 ['ENST00000590420.1_1_19:11685827-11688432:-|nuORF', 'ENSG00000102575|ENST00000648477|ACP5'] 81082 22863 PPFLDHSP True PC9_epitope_Rep6 908.4392174069201 908.43812993586 101.04 2 -1.723317503408679 0.4311714801241749 1.0 ['ENST00000560131.1_1_15:63356108-63358095:+|nuORF'] 130825 24697 VVFLKQLA True NCI_RA007_Epitope_Rep5 916.5745886809199 916.57348993586 102.48 2 -1.723394481197113 0.4311714801241749 1.0 ['ENSG00000089009|ENST00000202773|RPL6', 'ENST00000489915.1_1_18:6462145-6462637:-|nuORF', 'ENST00000456481.1_1_7:137407104-137407545:+|nuORF', 'ENST00000553205.1_1_12:112843569-112844143:-|nuORF', 'ENST00000454924.1_1_7:63602236-63602701:-|nuORF', 'ENST00000414898.1_1_1:241995599-241995785:+|nuORF'] 112522 7157 TPAAMGLLR True PC9_epitope_Rep5 928.5164221818 928.51532993586 32.499 2 -1.7234927953929142 0.4312000627542387 1.0 ['ZNF16|p.S261Rfs*55|1|0.33|ENSG00000170631|chr8:144932001-144932004|CTCA/-|frameshift_variant', 'ENSG00000170631|ENST00000394909|ZNF16'] 112619 18564 TPDLKDPPAS True PC9_epitope_Rep5 1039.5185899264297 1039.51748993586 76.431 2 -1.7235276233422627 0.4312000627542387 1.0 ['AluSz_dup11808|chr2:85658498-85658822:-|1.0215032426933477|0.0905077193686202|3.5|421.0|21|3|anti-sense'] 103201 18366 SQQRLVQLV True NCI_RA007_Epitope_Rep1 1069.62439240765 1069.6232899358602 75.575 2 -1.7235667333427809 0.4312000627542387 1.0 ['nc|ENSG00000136891|Q9NXF1-2|TEX10', 'ENSG00000136891|ENST00000374902|TEX10'] 64649 19554 LRHLLATQQK True H1975_Epitope_Rep3 1206.7196897748202 1206.7180349037899 81.933 3 -1.7236132337551855 0.4312000627542387 1.0 ['ENSG00000151466|ENST00000281142|SCLT1', 'ENST00000502495.1_1_4:129805634-129873545:-|nuORF'] 51885 20682 KKRKHISG True H1975_Epitope_Rep2 952.5930327097199 952.59192993586 85.66 2 -1.7236534547209283 0.4312000627542387 1.0 ['ENST00000393791.7_1_12:57866252-57866303:-|nuORF'] 52409 22153 KPGPLRRAH True PC9_epitope_Rep4 1030.6148307834599 1030.6137299358602 93.431 2 -1.7236767519344784 0.4312000627542387 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 27159 4464 FLRYPWNWLDF True NCI_RA007_Epitope_Rep1 1555.7612202336297 1555.75957490379 21.47 3 -1.7237358049203775 0.4312000627542387 1.0 ['SCN1A|p.D188Y|1|0.41|ENSG00000144285|chr2:166054678-166054678|C/A|missense_variant'] 120426 10300 VFTMIDIF True PC9_epitope_Rep2 984.4990407821599 984.49794993586 44.947 2 -1.7237594893033235 0.4312000627542387 1.0 ['nc|ENSG00000150625|P51674-3|GPM6A', 'nc|ENSG00000150625|P51674-2|GPM6A', 'ENSG00000150625|ENST00000393658|GPM6A', 'GPM6A|p.D73V|1|0.28|ENSG00000150625|chr4:175701587-175701587|T/A|missense_variant'] 92723 25288 RRKIYHRRLR True H1975_Epitope_Rep1 1452.9014511609598 1452.90034993586 104.75 2 -1.7237955219970478 0.43120643671978304 1.0 ['ENSG00000106823|ENST00000344604|ECM2', 'nc|ENSG00000106823|O94769-2|ECM2', 'ECM2|p.F576Lfs*35|1|0.41|ENSG00000106823|chr9:92500930-92500930|A/-|frameshift_variant'] 27568 15156 FPPGPAGF True H1975_Epitope_Rep2 788.38572528208 788.38462993586 63.453 2 -1.7241523034667516 0.4312576339941057 1.0 ['ENSG00000171467|ENST00000361428|ZNF318', 'ZNF318|p.M1085Afs*3|1|0.24|ENSG00000171467|chr6:43342698-43342699|AT/-|frameshift_variant', 'nc|ENSG00000171467|Q5VUA4-2|ZNF318'] 26865 20598 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 86.172 2 -1.724280125805777 0.43127038020640734 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 45480 19048 ISENRRVR True PC9_epitope_Rep1 1028.5839245779998 1028.5828299358602 78.059 2 -1.7243498183962005 0.43127038020640734 1.0 ['nc|ENSG00000009694|Q9UKZ4-2|TENM1', 'TENM1|p.G2343Rfs*5|1|0.33|ENSG00000009694|chrX:124383882-124383883|CC/-|frameshift_variant', 'ENSG00000009694|ENST00000371130|TENM1', 'TENM1|p.V1728Lfs*60|1|0.13|ENSG00000009694|chrX:124405213-124405219|AAGTGAC/-|frameshift_variant'] 63338 19873 LPEGVGIP True H1975_Epitope_Rep3 780.4381547777599 780.43760496793 83.198 1 -1.7244088508161899 0.4312877455209582 1.0 ['nc|ENSG00000131504|O60610-2|DIAPH1', 'nc|ENSG00000131504|O60610-3|DIAPH1', 'ENSG00000131504|ENST00000389054|DIAPH1'] 35889 10134 GVAFLGPP True NCI_RA007_Epitope_Rep1 756.4170254103599 756.4164749679301 43.429 1 -1.724469433744775 0.4312877455209582 1.0 ['nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB', 'ACACB|p.E1501Dfs*3|1|0.13|ENSG00000076555|chr12:109237218-109237228|GGAACTTAACC/-|frameshift_variant', 'ACACB|p.M1520Dfs*20|1|0.25|ENSG00000076555|chr12:109237272-109237273|-/A|frameshift_variant', 'ACACB|p.R1637Afs*31|1|0.16|ENSG00000076555|chr12:109241167-109241167|C/-|frameshift_variant', 'ACACB|p.S1919Wfs*12|1|0.19|ENSG00000076555|chr12:109250068-109250071|CTCT/-|frameshift_variant', 'ACACB|p.G1821Afs*44|1|0.22|ENSG00000076555|chr12:109246337-109246337|G/-|frameshift_variant'] 77703 14566 PAAGGEAP True PC9_epitope_Rep1 668.31295426464 668.3124049679301 60.853 1 -1.7245821542047093 0.4312877455209582 1.0 ['ENSG00000176788|ENST00000322611|BASP1'] 71691 26262 MLYARKLVDSN True NCI_RA007_Epitope_Rep1 1308.68600668804 1308.68437490379 108.68 3 -1.7247228369623957 0.4312877455209582 1.0 ['ENST00000266517.8_3_12:22841582-22841741:+|nuORF'] 79458 7619 PGPLSKQGS True PC9_epitope_Rep4 869.46068112749 869.45958993586 36.688 2 -1.724837439503006 0.4312877455209582 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 40562 21580 HSSPEGKEEPE True PC9_epitope_Rep6 1224.5258601348398 1224.5242049037902 95.883 3 -1.7248583367101806 0.4312877455209582 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'ENST00000472650.1_1_2:219136156-219182765:+|nuORF', 'nc|ENSG00000127838|Q8N490-2|PNKD'] 71437 13240 MIRGCGGG True PC9_epitope_Rep2 749.3312642644099 749.33016993586 56.204 2 -1.724866261321366 0.4312877455209582 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 11798 22237 DHKIETQRD True NCI_RA007_Epitope_Rep4 1140.5523496662 1140.5506949037901 96.461 3 -1.7249399383000563 0.4312877455209582 1.0 ['ENSG00000116954|ENST00000373001|RRAGC', 'ENSG00000025039|ENST00000369415|RRAGD', 'nc|ENSG00000025039|Q9NQL2-2|RRAGD'] 111293 15790 TLHHLALI True PC9_epitope_Rep6 916.54943656224 916.54832993586 72.988 2 -1.7250721651403111 0.43129411764705883 1.0 ['nc|ENSG00000165181|Q5VXU9-3|SHOC1', 'nc|ENSG00000165181|Q5VXU9|SHOC1', 'ENSG00000165181|ENST00000682961|SHOC1'] 27536 22051 FPGYPIHV True NCI_RA007_Epitope_Rep5 928.4806882960798 928.47958993586 91.948 2 -1.7252636723436392 0.43130202906344883 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000242441|Q9UNN4-2|GTF2A1L', 'STON1-GTF2A1L|p.P824Q|1|0.61|ENSG00000068781|chr2:48645088-48645088|C/A|missense_variant', 'STON1-GTF2A1L|p.P824L|1|0.33|ENSG00000068781|chr2:48645088-48645088|C/T|missense_variant', 'STON1-GTF2A1L|p.G826V|1|0.3|ENSG00000068781|chr2:48645094-48645094|G/T|missense_variant', 'STON1-GTF2A1L|p.A825T|1|0.12|ENSG00000068781|chr2:48645090-48645090|G/A|missense_variant'] 60803 22995 LKIIEKAC True PC9_epitope_Rep3 916.54157430048 916.54046993586 93.717 2 -1.7253261991618178 0.43130202906344883 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 123580 7530 VIIYELLDELM True H1975_Epitope_Rep1 1349.71524112765 1349.71360490379 33.962 3 -1.7253730006762311 0.43130202906344883 1.0 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 120699 22354 VGARARRRRST True PC9_epitope_Rep3 1284.7599318773598 1284.7588299358601 91.267 2 -1.725521162689513 0.43132729879906795 1.0 ['ENST00000377918.7_1_13:58208937-58209021:+|nuORF'] 131378 22984 VVSPVNVHI True PC9_epitope_Rep6 962.5549158655001 962.55380993586 101.51 2 -1.7256258864183058 0.43132729879906795 1.0 ['ENSG00000135999|ENST00000258484|EPC2'] 120778 19250 VGCGFCGK True H1975_Epitope_Rep3 769.3251162548099 769.3245649679301 80.718 1 -1.7256486031039027 0.43132729879906795 1.0 ['UGT2A3|p.Q331Tfs*23|1|0.24|ENSG00000135220|chr4:68932633-68932634|-/T|frameshift_variant', 'ENSG00000135220|ENST00000251566|UGT2A3'] 110300 24326 TIHFWHVW True PC9_epitope_Rep3 1124.5555845718397 1124.5544899358601 98.881 2 -1.7257486049573656 0.43132729879906795 1.0 ['ENST00000261700.7_1_14:52471272-52471401:+|nuORF'] 21937 25004 ESILKKFRKA True PC9_epitope_Rep5 1218.7448418934998 1218.74374993586 101.34 2 -1.7259339178809117 0.43132729879906795 1.0 ['ENST00000409484.5_1_2:172411796-172411952:+|nuORF'] 61681 20806 LLHSVLKIK True PC9_epitope_Rep2 1049.69610079593 1049.69500993586 85.472 2 -1.72595000493678 0.43132729879906795 1.0 ['nc|ENSG00000074527|Q9HB63-2|NTN4'] 26863 19258 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 80.941 2 -1.7259795518569656 0.43132729879906795 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 44755 15151 IPSDTDFRI True H1975_Epitope_Rep2 1062.53457434374 1062.53346993586 63.434 2 -1.726036607844902 0.43132729879906795 1.0 ['ENSG00000099219|ENST00000339450|ERMP1', 'nc|ENSG00000099219|Q7Z2K6-2|ERMP1', 'ENST00000475005.1_1_9:5812814-5833063:-|nuORF'] 118490 6319 VDSHYYRKVWD True NCI_RA007_Epitope_Rep5 1466.69426287262 1466.6931699358602 30.984 2 -1.726045418075768 0.43132729879906795 1.0 ['ENSG00000138131|ENST00000260702|LOXL4'] 68867 6898 LVEELEPPS True NCI_RA007_Epitope_Rep2 1011.5124419168299 1011.51134993586 31.45 2 -1.7260721482623418 0.43132729879906795 1.0 ['nc|ENSG00000114859|P51788-4|CLCN2', 'nc|ENSG00000114859|P51788-3|CLCN2', 'ENSG00000114859|ENST00000265593|CLCN2', 'nc|ENSG00000114859|P51788-5|CLCN2', 'nc|ENSG00000114859|P51788-2|CLCN2', 'ENST00000485667.1_1_3:184073137-184079267:-|nuORF'] 70453 15027 LYRNPKEWTKK True NCI_RA007_Epitope_Rep1 1461.8092330552097 1461.80812993586 62.518 2 -1.7261274015216792 0.43132729879906795 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 91403 22774 RNFRNSLLK True PC9_epitope_Rep6 1146.6621748987 1146.66106993586 100.69 2 -1.7262237968961183 0.43134003988080566 1.0 ['ENST00000538582.5_1_12:21602605-21605051:+|nuORF'] 72186 24296 MRRIARHFRF True PC9_epitope_Rep5 1388.7724111373598 1388.77130993586 98.477 2 -1.7262704412602676 0.43134003988080566 1.0 ['ENSG00000106346|ENST00000306177|USP42', 'nc|ENSG00000106346|Q9H9J4|USP42', 'ENST00000479544.6_1_7:6150764-6196715:+|nuORF'] 85262 14195 QKQILKIFY True PC9_epitope_Rep4 1179.7015800991899 1179.6999449037899 62.507 3 -1.7263655143904812 0.43134157816910873 1.0 ['ENSG00000133704|ENST00000256079|IPO8', 'IPO8|p.M609Ifs*12|1|0.25|ENSG00000133704|chr12:30661195-30661196|-/AT|frameshift_variant'] 95950 4395 SDYSFSVIAMS True PC9_epitope_Rep4 1205.52744035797 1205.52634993586 23.35 2 -1.7264021310525455 0.43134157816910873 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 26333 8816 FIFLFFMYFRW True H1975_Epitope_Rep3 1615.8049996219097 1615.8033449037898 38.917 3 -1.726424432391512 0.4313431163884844 1.0 ['ENST00000510312.6_1_5:73199984-73200204:+|nuORF'] 31194 11487 GDITEDLLLDF True H1975_Epitope_Rep3 1249.6077988536497 1249.6067099358602 49.307 2 -1.726429818989233 0.4313431163884844 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 82475 8543 PVDVPSAR True PC9_epitope_Rep1 839.45011644379 839.44900993586 37.698 2 -1.726521330263895 0.43137825970069005 1.0 ['ENSG00000145740|ENST00000396591|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-4|SLC30A5', 'nc|ENSG00000145740|Q8TAD4-3|SLC30A5'] 92403 12738 RQRRATPPA True NCI_RA007_Epitope_Rep2 1051.5999089953098 1051.5988099358601 54.165 2 -1.7265461038029553 0.43137825970069005 1.0 ['ENST00000608937.5_1_9:137000676-137000952:+|nuORF'] 72743 10529 NAAGFNVEK True H1975_Epitope_Rep3 948.4664947839199 948.46594496793 45.565 1 -1.7267230952997643 0.43137957684165723 1.0 ['ENSG00000179630|ENST00000325686|LACC1'] 56554 23676 LDVNENLHPPH True H1975_Epitope_Rep3 1283.62584895963 1283.62474993586 98.752 2 -1.726746888788146 0.43137957684165723 1.0 ['ENSG00000086570|ENST00000261800|FAT2', 'FAT2|p.T3539Sfs*28|1|0.35|ENSG00000086570|chr5:151521979-151521980|-/ATGAA|frameshift_variant'] 132997 25135 VYVIQEQA True PC9_epitope_Rep5 948.4916469025999 948.49054993586 101.83 2 -1.7268286787797187 0.43137957684165723 1.0 ['ENSG00000229972|ENST00000440739|IQCF3'] 60804 22201 LKIIEKAC True PC9_epitope_Rep4 916.54157430048 916.54046993586 93.642 2 -1.7270171074201996 0.43137957684165723 1.0 ['nc|ENSG00000198862|O94822-3|LTN1', 'ENSG00000198862|ENST00000361371|LTN1'] 136924 7349 YKEDKKTW True NCI_RA007_Epitope_Rep1 1096.5553097883198 1096.5542099358602 32.579 2 -1.7270640378945288 0.43137957684165723 1.0 ['nc|ENSG00000100523|Q8NEL9-2|DDHD1', 'nc|ENSG00000100523|Q8NEL9-4|DDHD1', 'ENSG00000100523|ENST00000673822|DDHD1'] 116288 7002 TVVMGGSR True H1975_Epitope_Rep3 805.41162276009 805.41052993586 31.897 2 -1.7270711512464416 0.43137957684165723 1.0 ['ENST00000415344.1_1_9:132892058-132895470:+|nuORF'] 7701 23735 ASQKKQKLE True PC9_epitope_Rep1 1058.6084079903399 1058.60730993586 96.09 2 -1.7270777949511045 0.43137957684165723 1.0 ['ENSG00000147378|ENST00000370350|FATE1'] 87440 21894 QTELEDVFV True PC9_epitope_Rep5 1078.51825557326 1078.51714993586 89.253 2 -1.7272190837371635 0.43137957684165723 1.0 ['nc|ENSG00000119866|Q9H165-8|BCL11A'] 135108 3697 YANKKLRERES True NCI_RA007_Epitope_Rep2 1392.74736107464 1392.74572490379 19.028 3 -1.7272847004830236 0.43137957684165723 1.0 ['ENST00000417647.6_1_5:140031695-140032611:+|nuORF'] 121407 21236 VGHSSPTL True PC9_epitope_Rep3 796.4079172786401 796.40682993586 86.975 2 -1.7273052945906207 0.4313859456553393 1.0 ['nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENSG00000048342|ENST00000424120|CC2D2A'] 62116 24520 LLPCLHSA True PC9_epitope_Rep3 852.45275929608 852.45166993586 99.659 2 -1.7276621808784476 0.4313984612110963 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 86451 24854 QQRRKLLP True NCI_RA007_Epitope_Rep5 1037.6457965585696 1037.64468993586 103.09 2 -1.7277096016818392 0.4313984612110963 1.0 ['ENSG00000146950|ENST00000380913|SHROOM2'] 118612 19366 VEAMVIREL True H1975_Epitope_Rep2 1058.57941636118 1058.57830993586 80.382 2 -1.7277171599883676 0.4313984612110963 1.0 ['ENSG00000119333|ENST00000372715|DYNC2I2'] 34067 21131 GNRLRAELGR True PC9_epitope_Rep6 1140.64758746372 1140.64648993586 94.125 2 -1.7277310768859035 0.4313984612110963 1.0 ['ENSG00000176155|ENST00000694881|CCDC57'] 137753 12374 YNLYIVENPHY True PC9_epitope_Rep4 1423.6772158261501 1423.67610993586 55.403 2 -1.727861624915719 0.4313984612110963 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 5357 13712 ALTATPFAP True H1975_Epitope_Rep2 887.4752685624699 887.47472496793 57.886 1 -1.7280006645243897 0.4313984612110963 1.0 ['ENSG00000156564|ENST00000338305|LRFN2'] 91633 18732 RPFFWMFV True NCI_RA007_Epitope_Rep1 1128.5578930709598 1128.55678993586 77.004 2 -1.7280334062643117 0.4313984612110963 1.0 ['ENSG00000142182|ENST00000628202|DNMT3L', 'nc|ENSG00000142182|Q9UJW3-2|DNMT3L'] 55831 16652 LDERANLPEI True PC9_epitope_Rep4 1168.6088019131598 1168.6077099358602 72.017 2 -1.72805256426188 0.4313984612110963 1.0 ['ENST00000587908.1_1_19:56832840-56833431:-|nuORF'] 78025 6748 PALPARAPA True PC9_epitope_Rep5 862.50248636982 862.50138993586 30.928 2 -1.7281285922577097 0.4313984612110963 1.0 ['ENST00000504806.5_1_5:10564479-10564683:+|nuORF'] 137693 24044 YMISTSET True H1975_Epitope_Rep1 930.4004489397 930.39934993586 99.767 2 -1.7283303701111101 0.43141602831160686 1.0 ['ENSG00000154736|ENST00000284987|ADAMTS5'] 92774 25379 RRKPSTFW True H1975_Epitope_Rep3 1076.58794732928 1076.58737496793 105.57 1 -1.7284130019298867 0.4314335950186465 1.0 ['ENSG00000136002|ENST00000409359|ARHGEF4', 'nc|ENSG00000136002|Q9NR80-3|ARHGEF4', 'nc|ENSG00000136002|Q9NR80|ARHGEF4', 'ENST00000490728.5_1_2:131799319-131803759:+|nuORF'] 64172 23509 LQHCPYLRK True NCI_RA007_Epitope_Rep3 1156.6175332053997 1156.6164299358602 102.01 2 -1.7286071348818022 0.4314623602929648 1.0 ['ENSG00000171487|ENST00000390649|NLRP5'] 120780 19477 VGCGFCGK True NCI_RA007_Epitope_Rep4 769.3251162548099 769.3245649679301 84.184 1 -1.7286338844451887 0.43146872725236574 1.0 ['UGT2A3|p.Q331Tfs*23|1|0.24|ENSG00000135220|chr4:68932633-68932634|-/T|frameshift_variant', 'ENSG00000135220|ENST00000251566|UGT2A3'] 41356 22209 IAMHLRFPF True NCI_RA007_Epitope_Rep3 1130.60590589254 1130.6048099358602 96.506 2 -1.7287125816471722 0.43149265932786096 1.0 ['ENST00000592895.5_1_19:1986085-1986331:-|nuORF'] 62051 25506 LLLYFQLREKA True NCI_RA007_Epitope_Rep5 1392.8129214533199 1392.81182993586 105.65 2 -1.7287196227933626 0.43149265932786096 1.0 ['ENST00000561073.1_1_15:101116892-101121059:-|nuORF'] 58945 7524 LFWLIMTRKWN True NCI_RA007_Epitope_Rep2 1506.8169612879396 1506.81532490379 33.893 3 -1.7287709865606713 0.431499025734059 1.0 ['ENST00000450169.6_1_7:32526725-32526845:-|nuORF'] 107013 22982 SYLLAERDLY True PC9_epitope_Rep5 1241.62920300457 1241.62810993586 93.39 2 -1.7288909359340359 0.4315165903313587 1.0 ['ENSG00000198959|ENST00000361475|TGM2', 'ENST00000469269.1_1_20:36758623-36761344:-|nuORF'] 81088 21371 PPFTVILV True PC9_epitope_Rep6 884.5371405430399 884.53604993586 95.078 2 -1.7291310054791411 0.43153568789052876 1.0 ['ENST00000560334.5_1_15:79271198-79356973:-|nuORF', 'ENSG00000058335|ENST00000558480|RASGRF1', 'nc|ENSG00000058335|Q13972|RASGRF1'] 67845 14305 LTITPDRENV True PC9_epitope_Rep1 1156.60880191316 1156.6077099358602 59.849 2 -1.7291856182171346 0.43153568789052876 1.0 ['ENSG00000152208|ENST00000282020|GRID2', 'nc|ENSG00000152208|O43424-2|GRID2'] 117891 19800 VAPVGVASK True PC9_epitope_Rep5 826.49125297978 826.49014993586 81.207 2 -1.7292071098832875 0.43153568789052876 1.0 ['ENST00000475136.1_1_1:201351927-201352312:-|nuORF', 'ENSG00000159166|ENST00000391967|LAD1'] 39198 24398 HLGAVGGG True PC9_epitope_Rep2 666.34492309926 666.3443749679301 99.416 1 -1.7293616920591757 0.4315372211771029 1.0 ['nc|ENSG00000241258|O75575-3|CRCP', 'ENST00000395326.7_1_7:65579815-65579905:+|nuORF', 'ENST00000477167.5_1_1:20991079-21011627:-|nuORF'] 133830 10869 WLWLDLWYLMF True H1975_Epitope_Rep1 1584.78392982416 1584.78282993586 46.767 2 -1.729396893878233 0.4315372211771029 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2', 'nc|ENSG00000145476|Q6ZWL3-2|CYP4V2', 'ENST00000507209.5_1_4:187118658-187122526:+|nuORF'] 128998 8853 VSYKHMRF True PC9_epitope_Rep4 1066.53822025554 1066.53712993586 41.584 2 -1.729468947851503 0.43154358658529757 1.0 ['ENSG00000184489|ENST00000521578|PTP4A3', 'nc|ENSG00000184489|O75365-3|PTP4A3', 'nc|ENSG00000184489|O75365-2|PTP4A3'] 114115 17388 TRRRTQRP True NCI_RA007_Epitope_Rep3 1069.6217070690498 1069.62060993586 76.294 2 -1.7295093630752914 0.43154511964347697 1.0 ['CPZ|p.G340Rfs*17|1|0.27|ENSG00000109625|chr4:8606847-8606848|-/A|frameshift_variant'] 106726 13645 SYDNYEGSAPN True H1975_Epitope_Rep2 1215.4680109055498 1215.46690993586 57.626 2 -1.7295101180408556 0.43154511964347697 1.0 ['ENSG00000089597|ENST00000356638|GANAB', 'nc|ENSG00000089597|Q14697-2|GANAB'] 140409 10162 YYFCRWYRNRK True NCI_RA007_Epitope_Rep2 1653.7986854548496 1653.79758993586 44.116 2 -1.729609521150857 0.4315512511896098 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 91434 1217 RNLQRLFGF True PC9_epitope_Rep4 1149.6407111781298 1149.63907490379 7.0481 3 -1.7296740227202603 0.4315512511896098 1.0 ['ENSG00000186603|ENST00000334815|HPDL'] 35197 13943 GSDWPHRL True PC9_epitope_Rep4 966.46716349026 966.46606993586 61.536 2 -1.7297493824422634 0.4315512511896098 1.0 ['ENST00000478979.5_1_16:774909-776367:-|nuORF', 'nc|ENSG00000162004|A2IDD5-6|CCDC78', 'nc|ENSG00000162004|A2IDD5-3|CCDC78', 'nc|ENSG00000162004|A2IDD5-5|CCDC78', 'ENST00000482878.5_1_16:774909-776367:-|nuORF'] 115666 14472 TVKQRKQYRR True NCI_RA007_Epitope_Rep2 1361.8003997070098 1361.79930993586 60.955 2 -1.7299000759210081 0.4315512511896098 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 124770 23285 VLKQFLLQR True PC9_epitope_Rep2 1143.7128134892298 1143.7111649037902 95.049 3 -1.7299039943143308 0.4315512511896098 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 83921 6193 QEKDTQTKL True PC9_epitope_Rep3 1089.56660274801 1089.56550993586 28.861 2 -1.7299612906231059 0.4315512511896098 1.0 ['ENSG00000160695|ENST00000621676|VPS11', 'nc|ENSG00000160695|Q9H270|VPS11', 'ENST00000526829.1_1_11:118943968-118944238:+|nuORF'] 129644 1082 VTHNRTYHFQ True H1975_Epitope_Rep1 1301.6265176659701 1301.6248649037902 5.6504 3 -1.7299927298222968 0.4315512511896098 1.0 ['ENSG00000088280|ENST00000336689|ASAP3', 'nc|ENSG00000088280|Q8TDY4-3|ASAP3'] 8671 6403 AVAVAAPRP True NCI_RA007_Epitope_Rep5 850.50248636982 850.50138993586 31.301 2 -1.7300194112871037 0.4315512511896098 1.0 ['ENST00000339176.7_1_16:67918814-67919670:+|nuORF'] 49067 14419 KFRETTMYLII True NCI_RA007_Epitope_Rep1 1413.7690080360098 1413.7679099358602 60.13 2 -1.7302038234415382 0.4315639799814145 1.0 ['nc|ENSG00000155313|Q9UHP3|USP25', 'nc|ENSG00000155313|Q9UHP3-1|USP25', 'ENSG00000155313|ENST00000400183|USP25'] 137815 26409 YPEYLSNFP True PC9_epitope_Rep3 1128.51277627 1128.51112490379 107.9 3 -1.730277499199607 0.4315639799814145 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 82281 22266 PTPCRQFFLS True PC9_epitope_Rep6 1194.5855643707798 1194.58390490379 98.614 3 -1.7306498300726325 0.4315927360666383 1.0 ['ENST00000551178.5_2_17:3576816-3577080:-|nuORF'] 85216 9783 QKIHSTPFWGP True NCI_RA007_Epitope_Rep2 1296.6615061923599 1296.6604099358601 42.675 2 -1.730812439882461 0.43160546350201523 1.0 ['ENST00000379310.7_2_13:42141480-42141777:-|nuORF'] 49274 24021 KHGFRDLRQ True PC9_epitope_Rep3 1155.62612374315 1155.62446490379 97.684 3 -1.7308548499489318 0.43160546350201523 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1'] 122613 11884 VGTLGDAVP True PC9_epitope_Rep1 827.4388830537499 827.43833496793 50.577 1 -1.7309524027388203 0.4316069949172656 1.0 ['ENSG00000092096|ENST00000354772|SLC22A17', 'nc|ENSG00000092096|Q8WUG5|SLC22A17', 'nc|ENSG00000092096|Q8WUG5-3|SLC22A17', 'ENST00000557699.5_1_14:23818379-23821759:-|nuORF'] 28538 24488 FSIFKRIIVFW True PC9_epitope_Rep1 1454.84382765878 1454.84218490379 99.037 3 -1.7309824943244574 0.4316069949172656 1.0 ['ENST00000239231.6_1_5:167978076-167978319:-|nuORF'] 121961 5528 VGPSTRLTQQS True PC9_epitope_Rep3 1172.61494992276 1172.61331490379 26.343 3 -1.7311596587360158 0.43160852626393803 1.0 ['DAB2IP|p.R968T|1|0.83|ENSG00000136848|chr9:121773431-121773431|G/C|missense_variant'] 72964 320 NCLVEKWRDQ True PC9_epitope_Rep1 1289.61865540421 1289.61700490379 1.756 3 -1.7312000696344019 0.43160852626393803 1.0 ['ENSG00000106483|ENST00000436072|SFRP4'] 93799 7731 RVACKRLVSM True NCI_RA007_Epitope_Rep2 1161.64745343469 1161.6463499358601 34.698 2 -1.731542608763115 0.43162608452281 1.0 ['nc|ENSG00000151067|Q13936-2|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C'] 62581 7918 LLVAQPLLQ True H1975_Epitope_Rep1 993.6222671493299 993.6211699358599 35.407 2 -1.7318160093359822 0.4316611998611842 1.0 ['ENSG00000266714|ENST00000645453|MYO15B'] 110786 23447 TKPLLWVLLW True PC9_epitope_Rep1 1267.76926573619 1267.7681699358602 94.973 2 -1.7318290898779318 0.4316611998611842 1.0 ['ENST00000465984.5_1_2:219247091-219251606:+|nuORF'] 109161 25592 TFPVKGLK True PC9_epitope_Rep3 888.5432885526399 888.54218993586 103.93 2 -1.7321491467637535 0.4317235357334766 1.0 ['nc|ENSG00000124181|P19174|PLCG1', 'ENSG00000124181|ENST00000685551|PLCG1', 'ENST00000608689.5_2_20:39801092-39811607:+|nuORF'] 86340 8320 QQKKAHVL True NCI_RA007_Epitope_Rep2 950.5661492555397 950.56504993586 37.004 2 -1.7324180158619826 0.43175228649150893 1.0 ['nc|ENSG00000095627|Q9BXT4-2|TDRD1', 'ENSG00000095627|ENST00000695399|TDRD1', 'nc|ENSG00000095627|Q9BXT4-3|TDRD1'] 11154 21188 DEGGTASKKQ True H1975_Epitope_Rep3 1019.48835242731 1019.48777496793 88.49 1 -1.732552040430756 0.4317810366058435 1.0 ['ENST00000534350.5_1_8:146277890-146278751:+|nuORF', 'ENSG00000182307|ENST00000331434|C8orf33', 'nc|nan|Q9H7E9-2|C8orf33', 'ENST00000530455.5_1_8:146277890-146279540:+|nuORF', 'ENST00000524395.5_1_8:146277890-146279540:+|nuORF'] 93033 22016 RRRHAFRRQA True PC9_epitope_Rep4 1352.77625064784 1352.77514993586 92.906 2 -1.7326583744966282 0.4317968120354616 1.0 ['nc|ENSG00000022567|Q5BKX6-2|SLC45A4', 'nc|ENSG00000022567|Q5BKX6|SLC45A4', 'nc|ENSG00000022567|Q5BKX6-3|SLC45A4', 'ENSG00000022567|ENST00000517878|SLC45A4'] 69993 17491 LYFLGVKEK True H1975_Epitope_Rep3 1095.63283183303 1095.63227496793 73.005 1 -1.732837643924134 0.4317968120354616 1.0 ['ENST00000372502.5_1_1:43317569-43317752:+|nuORF'] 30462 14286 GAGGKGRH True H1975_Epitope_Rep1 738.3885192467401 738.3879749679301 60.137 1 -1.7328938578260475 0.4317968120354616 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'ARHGEF40|p.A737Pfs*3|1|0.38|ENSG00000165801|chr14:21078445-21078445|G/-|frameshift_variant', 'ENST00000488316.1_1_20:62290002-62290707:+|nuORF'] 108675 11740 TELLLIGAPL True NCI_RA007_Epitope_Rep2 1038.6324974798597 1038.6314099358601 50.263 2 -1.7329373739846965 0.4317968120354616 1.0 ['nc|ENSG00000005844|P20701-3|ITGAL', 'ENSG00000005844|ENST00000356798|ITGAL', 'nc|ENSG00000005844|P20701-2|ITGAL'] 54816 16399 LAFHPHGA True H1975_Epitope_Rep2 848.42932142956 848.42822993586 68.299 2 -1.7329811314979853 0.4317968120354616 1.0 ['ENST00000368457.2_1_1:154930914-154931193:-|nuORF'] 57811 24082 LEPPAAREP True H1975_Epitope_Rep1 978.51344497634 978.51234993586 99.91 2 -1.7329917081807746 0.4317968120354616 1.0 ['nc|ENSG00000164430|Q8N884-2|CGAS', 'ENSG00000164430|ENST00000370315|CGAS'] 71436 13971 MIRGCGGG True PC9_epitope_Rep1 749.3312642644099 749.33016993586 58.577 2 -1.7331040642264088 0.43181436582826827 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 78973 4363 PFKHDVFLLE True PC9_epitope_Rep5 1243.6601092100298 1243.6584749037902 21.853 3 -1.7334006742205417 0.43182708559531674 1.0 ['ENSG00000263002|ENST00000426739|ZNF234'] 92412 24003 RQRRRRERDRK True H1975_Epitope_Rep1 1610.9414184799796 1610.94032993586 99.609 2 -1.7334074363263 0.43182708559531674 1.0 ['ENST00000452135.6_3_5:179707603-179719088:-|nuORF'] 67406 12035 LTEAEQREL True PC9_epitope_Rep2 1087.55095268387 1087.54984993586 51.609 2 -1.7336889188959865 0.4318509978621238 1.0 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2'] 64840 17700 LSALGGCP True NCI_RA007_Epitope_Rep4 716.3527109016401 716.3521649679301 76.59 1 -1.7337787893840635 0.4318509978621238 1.0 ['nc|ENSG00000023171|Q3KR37-3|GRAMD1B'] 18489 23323 EKLSSSIQVKK True PC9_epitope_Rep2 1245.7292513990099 1245.72760490379 95.185 3 -1.7339519486775337 0.4319021288979427 1.0 ['ENSG00000144597|ENST00000396842|EAF1'] 37120 8514 GVSWGGIH True PC9_epitope_Rep5 811.39768694811 811.39658993586 37.691 2 -1.734026042767195 0.4319115359217433 1.0 ['ENST00000407472.5_1_22:19839644-19839932:-|nuORF'] 48239 21037 KDEDFKQYVNK True H1975_Epitope_Rep3 1412.6935941662798 1412.69248993586 87.865 2 -1.7340630919461528 0.4319115359217433 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 36433 17850 GVIGLLILILL True H1975_Epitope_Rep2 1135.79441785487 1135.79387496793 73.981 1 -1.734096842416048 0.4319115359217433 1.0 ['ENST00000531550.1_1_11:118007744-118012097:-|nuORF', 'nc|ENSG00000177098|Q8IWT1-3|SCN4B', 'nc|ENSG00000177098|Q8IWT1-2|SCN4B', 'ENSG00000177098|ENST00000324727|SCN4B'] 122415 3559 VGSHRYDMFKD True NCI_RA007_Epitope_Rep4 1353.6135700237699 1353.61192490379 19.708 3 -1.7341200206140033 0.4319115359217433 1.0 ['ENSG00000093167|ENST00000336686|LRRFIP2'] 111233 11701 TLGGRHGC True H1975_Epitope_Rep2 799.37590595771 799.3753549679301 50.082 1 -1.7341420377895582 0.4319115359217433 1.0 ['ENST00000584712.5_1_17:7476159-7478717:+|nuORF', 'ENST00000580461.5_1_17:7476163-7478717:+|nuORF'] 32151 22827 GFCPAVLC True H1975_Epitope_Rep2 808.3611674103599 808.36006993586 94.249 2 -1.7341732256346638 0.4319178940770918 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 67367 13604 LTDRVMTVSF True PC9_epitope_Rep4 1167.59579470131 1167.59468993586 60.222 2 -1.7342640069116644 0.43192425209011853 1.0 ['ENST00000469550.6_1_5:141001037-141014565:-|nuORF', 'ENSG00000171720|ENST00000305264|HDAC3', 'nc|ENSG00000171720|O15379-2|HDAC3'] 121242 16926 VGGRLRSK True NCI_RA007_Epitope_Rep2 871.53518348043 871.5346349679301 70.577 1 -1.7343514311165937 0.4319369676892256 1.0 ['ENST00000563255.1_1_16:65157712-65157874:-|nuORF'] 140191 23635 YVVMLYVV True PC9_epitope_Rep2 984.5354262908797 984.53432993586 96.384 2 -1.7343643818080545 0.4319369676892256 1.0 ['nc|ENSG00000186575|P35240-2|NF2'] 8429 23135 ATRSRLRRRTP True PC9_epitope_Rep6 1368.8174467534798 1368.8163499358602 102.09 2 -1.7347917495740754 0.4320328588056227 1.0 ['ENST00000401903.5_1_7:1197885-1199768:-|nuORF'] 48089 25971 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 107.78 3 -1.735144667293767 0.4320504068134254 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 85163 18577 QIYRLRPQKR True NCI_RA007_Epitope_Rep5 1356.8102361147196 1356.80912993586 78.277 2 -1.7352560414274711 0.43206795442845314 1.0 ['ENST00000430420.5_1_X:54948679-54949098:+|nuORF'] 98776 15395 SISPALAC True NCI_RA007_Epitope_Rep1 760.37892564948 760.37782993586 63.961 2 -1.735427953076636 0.4320918572899414 1.0 ['ENST00000524753.4_1_11:18369576-18369654:+|nuORF'] 34317 14639 GPQPPPHDP True PC9_epitope_Rep2 940.4402800360799 940.43918993586 61.577 2 -1.7355044801459882 0.4320918572899414 1.0 ['ENST00000562532.2_1_20:30584341-30584887:+|nuORF'] 128219 24125 VRVGNPAA True NCI_RA007_Epitope_Rep2 782.4398861132598 782.43878993586 101.34 2 -1.735533176015534 0.4320933772018174 1.0 ['ENST00000318988.10_1_17:7155218-7155278:-|nuORF'] 64178 18095 LQHHIIHT True PC9_epitope_Rep6 997.54574816413 997.54519496793 82.238 1 -1.735576198327524 0.4320933772018174 1.0 ['nc|ENSG00000197714|Q14592-2|ZNF460', 'ENSG00000197714|ENST00000360338|ZNF460'] 112529 18998 TPAFDKPK True H1975_Epitope_Rep1 902.4861675993399 902.48506993586 79.206 2 -1.7356177913339148 0.432094897045658 1.0 ['ENSG00000196839|ENST00000372874|ADA', 'ENST00000545776.5_1_20:43255095-43280248:-|nuORF', 'ENST00000492931.5_1_20:43251503-43280248:-|nuORF'] 59724 10488 LGVGEVLH True PC9_epitope_Rep5 822.4599528515 822.45884993586 45.328 2 -1.7356245368141163 0.432094897045658 1.0 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000495579.5_1_6:32088425-32095984:-|nuORF'] 28150 23581 FRKPCIFTLHK True PC9_epitope_Rep4 1388.77509647596 1388.77398993586 99.011 2 -1.7360501286930379 0.43210857257938196 1.0 ['ZNF559|p.S132C|1|0.15|ENSG00000188321|chr19:9341846-9341846|C/G|missense_variant'] 86158 9307 QPSLPEAK True PC9_epitope_Rep5 868.4654321547599 868.46432993586 40.752 2 -1.7360981972125078 0.43210857257938196 1.0 ['ENST00000407418.7_1_22:39260685-39261309:-|nuORF'] 133440 24242 WGFSTLSR True PC9_epitope_Rep4 952.4766655448 952.47556993586 101.73 2 -1.7361961909215635 0.43210857257938196 1.0 ['ENST00000552521.5_1_12:44198371-44200048:-|nuORF'] 5936 4121 APHWTSAPL True PC9_epitope_Rep3 978.49231560894 978.49120993586 20.972 2 -1.7362463146823288 0.43210857257938196 1.0 ['nc|ENSG00000078018|P11137-3|MAP2', 'ENSG00000078018|ENST00000682079|MAP2', 'nc|ENSG00000078018|P11137-2|MAP2', 'nc|ENSG00000078018|P11137-4|MAP2'] 49273 21318 KHGFRDLRQ True NCI_RA007_Epitope_Rep4 1155.62612374315 1155.62446490379 92.412 3 -1.7363415701592881 0.43210857257938196 1.0 ['ENSG00000155629|ENST00000339364|PIK3AP1', 'nc|ENSG00000155629|Q6ZUJ8-2|PIK3AP1'] 14441 7060 DTMFLKCI True PC9_epitope_Rep5 969.4663607548899 969.46526993586 32.124 2 -1.736354841440188 0.43210857257938196 1.0 ['nc|ENSG00000056558|Q13077-2|TRAF1', 'ENSG00000056558|ENST00000373887|TRAF1'] 123599 19755 VIKKQHRKST True H1975_Epitope_Rep2 1223.7462388758297 1223.7445949037901 81.961 3 -1.7363943376056643 0.43210857257938196 1.0 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 134493 10551 WTWYRARARRC True NCI_RA007_Epitope_Rep2 1523.7680540329097 1523.76694993586 45.638 2 -1.7364155192014283 0.43210857257938196 1.0 ['ENST00000222823.8_1_7:30492653-30496398:-|nuORF'] 48635 8342 KEITEGDEVEV True PC9_epitope_Rep5 1246.5928770655 1246.59178993586 37.028 2 -1.7364295257123035 0.43210857257938196 1.0 ['TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion'] 136162 7272 YGHTLTPE True NCI_RA007_Epitope_Rep4 916.42904664604 916.4284949679301 34.607 1 -1.7364966441938765 0.43210857257938196 1.0 ['nc|ENSG00000142102|Q32M88-2|PGGHG', 'ENST00000474221.5_1_11:289135-291269:+|nuORF', 'ENSG00000142102|ENST00000409548|PGGHG'] 90161 20386 RHDGKKLLLQ True NCI_RA007_Epitope_Rep5 1206.71968977482 1206.71858993586 85.35 2 -1.7365040168363728 0.43210857257938196 1.0 ['ENST00000496384.6_2_7:140425901-140426006:-|nuORF'] 97513 18590 SGPSLKMP True H1975_Epitope_Rep3 815.42112481463 815.4205749679301 77.964 1 -1.7365117937229495 0.43210857257938196 1.0 ['ENSG00000124942|ENST00000378024|AHNAK'] 31753 18827 GELFAIKAV True PC9_epitope_Rep5 946.5487678558999 946.54766993586 77.433 2 -1.7365191939864604 0.43210857257938196 1.0 ['PKN1|p.L646V|1|0.31|ENSG00000123143|chr19:14467927-14467927|C/G|missense_variant'] 120636 5401 VGAKGARAP True PC9_epitope_Rep2 825.48208527841 825.48098993586 26.17 2 -1.7365743093946047 0.43210857257938196 1.0 ['nc|ENSG00000128805|Q7Z5H3-3|ARHGAP22', 'ENSG00000128805|ENST00000249601|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-5|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-2|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22'] 52410 23100 KPGPLRRAH True PC9_epitope_Rep5 1030.6148307834599 1030.6137299358602 93.842 2 -1.7365953816800146 0.43210857257938196 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 3340 11750 AGHGSSGGGG True H1975_Epitope_Rep1 742.29942945882 742.29888496793 50.19 1 -1.736689170487929 0.43210857257938196 1.0 ['nc|ENSG00000133710|Q9NQ38-2|SPINK5', 'ENSG00000133710|ENST00000256084|SPINK5', 'nc|ENSG00000133710|Q9NQ38-3|SPINK5'] 22506 12179 ETKLPKIMPE True PC9_epitope_Rep2 1184.6474959209997 1184.64638993586 52.158 2 -1.7368072684184788 0.43210857257938196 1.0 ['ENST00000421692.5_2_6:30003742-30025305:-|nuORF', 'ENST00000431012.5_1_6:30024744-30025305:-|nuORF'] 80011 24084 PKGERRPLTAK True PC9_epitope_Rep2 1251.7411534953897 1251.73951490379 98.141 3 -1.736813837774898 0.43210857257938196 1.0 ['ENSG00000198920|ENST00000361413|KIAA0753', 'nc|ENSG00000198920|Q2KHM9-2|KIAA0753'] 47137 12327 IWFLPRSL True PC9_epitope_Rep2 1030.5963867546598 1030.5952899358601 52.728 2 -1.737064672307288 0.4321212799283956 1.0 ['ENSG00000160695|ENST00000621676|VPS11', 'nc|ENSG00000160695|Q9H270|VPS11'] 53918 22708 KYIMLEIKL True PC9_epitope_Rep2 1149.6831531537298 1149.68149490379 92.841 3 -1.7370703856908505 0.4321212799283956 1.0 ['nc|ENSG00000128805|Q7Z5H3-3|ARHGAP22', 'ENSG00000128805|ENST00000249601|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-5|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-2|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22'] 134824 11763 WYRHRALEVIP True H1975_Epitope_Rep1 1438.7833526605398 1438.7822499358601 50.238 2 -1.7373351503080083 0.4321500095098511 1.0 ['nc|ENSG00000184313|Q68CQ1-1|MROH7', 'nc|ENSG00000184313|Q68CQ1-9|MROH7', 'ENSG00000184313|ENST00000421030|MROH7', 'nc|ENSG00000184313|Q68CQ1-2|MROH7', 'ENST00000440217.5_1_1:55136488-55151982:+|nuORF'] 119713 2629 VETFGAAWRSP True PC9_epitope_Rep2 1219.5985715826298 1219.59746993586 14.762 2 -1.7375445138716323 0.43223467812311206 1.0 ['FCGBP|p.A3816S|1|0.32|ENSG00000275395|chr19:39872381-39872381|C/A|missense_variant'] 52638 21610 KQEIKEIMSPT True NCI_RA007_Epitope_Rep5 1302.6853379816996 1302.68368490379 90.213 3 -1.7378532196120047 0.4322872965262628 1.0 ['nc|ENSG00000155974|Q9Y3R0-3|GRIP1', 'nc|ENSG00000155974|Q9Y3R0-2|GRIP1', 'ENSG00000155974|ENST00000359742|GRIP1'] 74399 8802 NITVERMN True H1975_Epitope_Rep3 975.48076494907 975.47966993586 38.863 2 -1.7379936943088212 0.4322872965262628 1.0 ['ENST00000532739.1_1_16:16450692-16458759:+|nuORF', 'ENST00000532415.5_1_16:18480742-18495490:-|nuORF', 'ENST00000472413.5_1_16:15016937-15019904:+|nuORF', 'ENST00000458669.1_1_16:16412841-16418244:+|nuORF', 'ENST00000536260.5_1_16:16412841-16418555:+|nuORF', 'ENST00000534164.5_1_16:15014190-15019904:+|nuORF', 'ENST00000525846.6_1_16:18437791-18443539:-|nuORF'] 97859 23069 SHKRIMLFTN True H1975_Epitope_Rep3 1245.6652116738098 1245.66355490379 96.341 3 -1.7380182831201172 0.4322872965262628 1.0 ['nc|ENSG00000196419|P12956-2|XRCC6', 'ENSG00000196419|ENST00000360079|XRCC6'] 99154 8540 SLAPQTFRGT True NCI_RA007_Epitope_Rep3 1076.56145779792 1076.56036993586 40.664 2 -1.738156680620937 0.4322936477748193 1.0 ['ENST00000520810.5_1_8:42188602-42189049:+|nuORF'] 59017 19393 LGAPDVLP True NCI_RA007_Epitope_Rep4 780.43815477776 780.43760496793 83.863 1 -1.7382512250403013 0.43229667748070255 1.0 ['ENST00000394266.8_1_16:58549747-58550573:+|nuORF'] 95868 19541 SDPLGHCP True NCI_RA007_Epitope_Rep5 824.34868815036 824.34758993586 82.056 2 -1.738366166651906 0.43229667748070255 1.0 ['ENST00000495313.5_2_9:131038987-131046858:+|nuORF'] 44417 8183 INGLLGNIV True PC9_epitope_Rep1 911.54401682863 911.54290993586 36.309 2 -1.7383733740739 0.43229667748070255 1.0 ['nc|ENSG00000217128|Q8TF40-3|FNIP1'] 99846 10283 SLHCAEDD True NCI_RA007_Epitope_Rep5 888.3283466285999 888.32724993586 46.183 2 -1.7384049577846314 0.43229667748070255 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 33053 15942 GKDIWHPG True H1975_Epitope_Rep1 908.45045079696 908.44934993586 66.632 2 -1.738528580444003 0.43230302826906514 1.0 ['ENSG00000182150|ENST00000653738|ERCC6L2', 'nc|ENSG00000182150|Q5T890-2|ERCC6L2'] 23342 24611 EVTGPCPA True H1975_Epitope_Rep1 772.34254014076 772.3414499358599 101.98 2 -1.738611211157332 0.4323205655987113 1.0 ['ENST00000487192.1_1_2:242162779-242163565:+|nuORF'] 81283 24139 PPPYHDAL True NCI_RA007_Epitope_Rep2 908.43921740692 908.43812993586 101.4 2 -1.738643529173091 0.43232207978164083 1.0 ['ENSG00000178233|ENST00000451188|TMEM151B'] 109381 18831 TGLPKPAI True PC9_epitope_Rep5 795.48543932335 795.48434993586 77.448 2 -1.7386828426398808 0.43232207978164083 1.0 ['nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5'] 42901 23083 IFVFMFPL True H1975_Epitope_Rep3 1012.5455970517598 1012.54448993586 96.402 2 -1.7388993109571478 0.4323347800796456 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 103024 16691 SQKILTHR True NCI_RA007_Epitope_Rep3 981.5719629119701 981.57086993586 73.465 2 -1.738930133755878 0.4323347800796456 1.0 ['PIK3AP1-TM9SF3|1|fusion', 'ENSG00000155629|ENST00000339364|PIK3AP1'] 92783 23051 RRKRRERKQR True H1975_Epitope_Rep2 1467.9083274465495 1467.9072299358602 95.121 2 -1.739009787135172 0.4323474798093917 1.0 ['ENSG00000130764|ENST00000378251|LRRC47'] 18367 22539 EIYKYKRLQY True PC9_epitope_Rep3 1402.7608858804601 1402.75978993586 91.968 2 -1.7390816267858684 0.4323474798093917 1.0 ['ENST00000343776.9_1_1:227843645-227843831:+|nuORF'] 127413 14681 VQRFPTTYFI True H1975_Epitope_Rep1 1270.6710082468996 1270.66990993586 61.686 2 -1.7391389945099585 0.4323489932885906 1.0 ['STPG4|p.T162K|1|0.12|ENSG00000239605|chr2:47129975-47129975|G/T|missense_variant', 'nc|ENSG00000239605|Q8N801-2|STPG4', 'ENSG00000239605|ENST00000445927|STPG4'] 133430 1724 WFYDMKKVW True H1975_Epitope_Rep1 1301.6267009067699 1301.62504490379 8.9421 3 -1.7391602032460192 0.4323489932885906 1.0 ['ENSG00000143418|ENST00000368954|CERS2', 'ENST00000559020.1_1_1:150940136-150940936:-|nuORF'] 90528 17912 RKEKKKTS True NCI_RA007_Epitope_Rep5 1003.6138277239498 1003.61272993586 75.693 2 -1.739259457129971 0.4323777138958177 1.0 ['nc|ENSG00000118096|Q9NQC8-2|IFT46'] 88784 20652 RDMKGALS True NCI_RA007_Epitope_Rep5 876.4487365447999 876.44762993586 86.393 2 -1.7392795202535973 0.43238406299635357 1.0 ['ENSG00000180016|ENST00000322608|OR1E1'] 79838 1387 PIFPWYAFQL True PC9_epitope_Rep3 1280.65938093404 1280.65828993586 7.6444 2 -1.7393681278760722 0.43239192438901625 1.0 ['ENST00000378088.1_1_9:35737475-35737712:-|nuORF'] 111234 19132 TLGGRLPLHR True H1975_Epitope_Rep1 1118.66726027914 1118.6661699358601 79.735 2 -1.739410241459674 0.43239192438901625 1.0 ['ENST00000338447.10_1_11:63722497-63722614:+|nuORF'] 48081 24867 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 102.97 3 -1.7394404348425918 0.43239192438901625 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 71440 11711 MIRGCGGG True PC9_epitope_Rep6 749.3312642644099 749.33016993586 56.192 2 -1.7395014722726785 0.4324046215620701 1.0 ['ENST00000264657.9_1_17:40467360-40467552:-|nuORF'] 16964 4581 EGGPWGNWK True PC9_epitope_Rep3 1029.46682913709 1029.46572993586 22.714 2 -1.7395389316472476 0.4324046215620701 1.0 ['ENST00000275732.5_1_7:100278784-100278913:-|nuORF'] 79808 20324 PIDDTVEG True H1975_Epitope_Rep2 844.38142774728 844.38032993586 84.222 2 -1.7396098120166434 0.43241096993557626 1.0 ['ENSG00000165280|ENST00000358901|VCP', 'ENST00000493886.5_1_9:35062192-35072350:-|nuORF'] 12894 22907 DLLTARRRHTP True PC9_epitope_Rep6 1334.7531151614198 1334.75200993586 101.22 2 -1.739759084644096 0.43241399364738514 1.0 ['ENST00000369501.2_1_6:88875621-88875864:-|nuORF'] 65339 5619 LSELPQEIGN True NCI_RA007_Epitope_Rep5 1098.55570371114 1098.55460993586 28.302 2 -1.739772545186883 0.43241399364738514 1.0 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1', 'ENST00000487251.5_1_6:53762124-53769284:+|nuORF'] 100300 11901 SLLVLWTSP True PC9_epitope_Rep5 1014.57498260374 1014.57388993586 50.774 2 -1.7397990009076296 0.43241399364738514 1.0 ['ENSG00000172724|ENST00000311925|CCL19'] 122042 6132 VGQQQGLP True PC9_epitope_Rep3 825.4344663796498 825.43336993586 28.634 2 -1.739851016728081 0.43241399364738514 1.0 ['ENSG00000100393|ENST00000263253|EP300', 'EP300|p.H2324Pfs*55|1|0.13|ENSG00000100393|chr22:41178674-41178675|-/C|frameshift_variant'] 78469 11222 PDCHKSFSQSS True NCI_RA007_Epitope_Rep5 1221.5084362488901 1221.50680490379 49.801 3 -1.7399140886464812 0.43242034156107056 1.0 ['ENSG00000196391|ENST00000354377|ZNF774'] 60945 24187 LLAALTAYK True PC9_epitope_Rep4 962.5800679841799 962.57896993586 101.51 2 -1.7400242575038 0.4324248761448909 1.0 ['ENST00000480273.5_1_20:62319266-62327135:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-9|RTEL1', 'nc|ENSG00000258366|Q9NZ71|RTEL1', 'nc|ENSG00000258366|Q9NZ71-7|RTEL1', 'ENSG00000258366|ENST00000360203|RTEL1', 'nc|ENSG00000258366|Q9NZ71-2|RTEL1', 'ENST00000496816.5_1_20:62325699-62327208:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-5|RTEL1', 'ENST00000496281.1_1_20:62323608-62327208:+|nuORF'] 121612 3867 VGLDNDLR True NCI_RA007_Epitope_Rep4 900.46649478392 900.46538993586 21.079 2 -1.74008289402917 0.4324248761448909 1.0 ['nc|ENSG00000170456|Q6ZUT9-4|DENND5B', 'ENSG00000170456|ENST00000389082|DENND5B', 'nc|ENSG00000170456|Q6ZUT9-2|DENND5B'] 119432 6766 VEPHSPSPSSK True PC9_epitope_Rep3 1150.56185172074 1150.56074993586 31.047 2 -1.7401937470757194 0.4324248761448909 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 11301 5165 DETIAAKQIEK True NCI_RA007_Epitope_Rep2 1244.66123140884 1244.6601299358601 24.71 2 -1.7402521168432037 0.4324248761448909 1.0 ['ENSG00000100359|ENST00000248929|SGSM3', 'nc|ENSG00000100359|Q96HU1-2|SGSM3', 'ENST00000478085.5_1_22:40800171-40802852:+|nuORF'] 134650 17806 WWIWWQWWKL True PC9_epitope_Rep3 1616.8081108564 1616.8070099358602 73.688 2 -1.7404101891222676 0.4324248761448909 1.0 ['chr12:54282841-54283827|502|22.89|0.0|21.13|+|1|HNRNPA1,HNRNPA1|1'] 109916 1191 THQQLMEKKGC True H1975_Epitope_Rep1 1301.6220265324898 1301.62039490379 6.2037 3 -1.7405258401549415 0.4324248761448909 1.0 ['ENSG00000168394|ENST00000354258|TAP1', 'nc|ENSG00000168394|Q03518-2|TAP1'] 15856 5104 EDLRNDEHSP True PC9_epitope_Rep3 1210.52144346074 1210.5203499358602 24.718 2 -1.7406461389043268 0.43242638753760304 1.0 ['nc|ENSG00000049246|P56645|PER3', 'ENSG00000049246|ENST00000377532|PER3'] 93573 14367 RSRWERQDRRW True NCI_RA007_Epitope_Rep4 1629.8348877227697 1629.83378993586 62.569 2 -1.7407954627725546 0.43242638753760304 1.0 ['ENST00000541775.5_1_12:7270875-7271013:+|nuORF'] 130528 10039 VTWRINGIPV True H1975_Epitope_Rep3 1153.66077791637 1153.6596899358601 43.651 2 -1.7409364874320747 0.432443917604169 1.0 ['nc|ENSG00000198910|P32004-3|L1CAM', 'nc|ENSG00000198910|P32004-2|L1CAM', 'ENSG00000198910|ENST00000370060|L1CAM'] 99845 10174 SLHCAEDD True NCI_RA007_Epitope_Rep5 888.3283466285999 888.32724993586 45.767 2 -1.740965535641362 0.4324502644733458 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 107848 6340 TARKKKKKK True PC9_epitope_Rep5 1114.7662460444199 1114.76514993586 29.361 2 -1.7410394389684383 0.43245661120057255 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 20097 8894 ENILTNYENQ True H1975_Epitope_Rep1 1236.5622456435601 1236.5611499358602 39.115 2 -1.741259792852882 0.432459632329919 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'DST|p.S2362C|2|0.2|ENSG00000151914|chr6:56606910-56606910|G/C|missense_variant'] 29496 25474 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 105.99 3 -1.741416047841958 0.432459632329919 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 69770 24383 LWPFIMLRTRT True PC9_epitope_Rep2 1432.8013112237998 1432.79965490379 99.355 3 -1.7414772731854118 0.432459632329919 1.0 ['ENST00000335025.12_1_22:22051218-22051356:+|nuORF'] 119540 8816 VERCHCKF True NCI_RA007_Epitope_Rep3 1020.46334106312 1020.46224993586 41.77 2 -1.7415007126917093 0.432459632329919 1.0 ['ENSG00000111186|ENST00000397196|WNT5B', 'ENST00000545747.1_1_12:1754224-1755415:+|nuORF'] 38457 15720 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 67.184 2 -1.7416114030025232 0.43246597859754665 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 15922 7306 EDRSSLLLLS True H1975_Epitope_Rep3 1131.61355294043 1131.61244993586 33.075 2 -1.7417490242198463 0.4324786707070255 1.0 ['ENSG00000176624|ENST00000406189|MEX3C'] 138904 11067 YSECHDFWVN True NCI_RA007_Epitope_Rep5 1298.5026225924598 1298.50096490379 49.203 3 -1.741753171899623 0.4324786707070255 1.0 ['nc|ENSG00000185513|Q9Y468-4|L3MBTL1', 'nc|ENSG00000185513|Q9Y468-1|L3MBTL1', 'nc|ENSG00000185513|Q9Y468|L3MBTL1', 'ENSG00000185513|ENST00000418998|L3MBTL1', 'nc|ENSG00000185513|Q9Y468-2|L3MBTL1'] 119026 6686 VEGASARWAA True PC9_epitope_Rep5 1016.5039429217999 1016.50284993586 30.69 2 -1.7418202420178852 0.4325073799087575 1.0 ['FNBP4-PVRL1|1|fusion'] 71791 21694 MNNSLAQLTF True PC9_epitope_Rep6 1137.54884450889 1137.5471849037901 96.333 3 -1.7419233380839165 0.43251372535864835 1.0 ['ENSG00000157423|ENST00000393567|HYDIN', 'nc|ENSG00000157423|Q4G0P3-2|HYDIN', 'ENST00000378856.8_2_16:70845233-70899022:-|nuORF'] 77897 23074 PAGVVRER True PC9_epitope_Rep3 882.5035489989799 882.5030049679301 94.023 1 -1.7420710745022066 0.43252007066663684 1.0 ['ENST00000395595.7_1_22:51221660-51222060:-|nuORF'] 79455 8463 PGPLSKQGS True PC9_epitope_Rep3 869.46068112749 869.45958993586 37.515 2 -1.7422970827397386 0.43257114105216077 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 121007 6459 VGFAEAAR True PC9_epitope_Rep3 819.4239016959499 819.42280993586 29.87 2 -1.742531293481783 0.4326061920681597 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 123479 14584 VIGEKRAVE True PC9_epitope_Rep2 999.5712942056299 999.57018993586 61.366 2 -1.7425737630378135 0.4326061920681597 1.0 ['ENST00000477982.2_1_13:77575078-77575330:-|nuORF'] 79550 6673 PGSPEAPQGK True NCI_RA007_Epitope_Rep4 966.4770594676198 966.47596993586 32.289 2 -1.7426511837415435 0.43261253605849864 1.0 ['ENSG00000185163|ENST00000397333|DDX51'] 122668 20232 VGTQSAGK True PC9_epitope_Rep6 746.3922672145 746.39171496793 90.505 1 -1.742723022215661 0.4326185631554234 1.0 ['ENSG00000153201|ENST00000283195|RANBP2', 'RANBP2|p.S2884L|2|0.23|ENSG00000153201|chr2:108781320-108781320|C/T|missense_variant'] 94163 13235 RWLEKEERFLK True NCI_RA007_Epitope_Rep1 1532.8463468399198 1532.84524993586 55.48 2 -1.7427530935839186 0.4326185631554234 1.0 ['nc|ENSG00000169398|Q05397-7|PTK2', 'nc|ENSG00000169398|Q05397|PTK2', 'ENSG00000169398|ENST00000696786|PTK2', 'nc|ENSG00000169398|Q05397-5|PTK2', 'nc|ENSG00000169398|Q05397-6|PTK2'] 111444 25102 TLKTIISVF True NCI_RA007_Epitope_Rep1 1020.6219327961599 1020.62082993586 103.88 2 -1.7427552719544788 0.4326185631554234 1.0 ['ENST00000282272.14_1_2:197852623-197852740:-|nuORF'] 79392 4900 PGLNPRIQA True NCI_RA007_Epitope_Rep3 964.54541381096 964.54430993586 26.265 2 -1.7428713794829171 0.4326185631554234 1.0 ['ENSG00000077063|ENST00000160373|CTTNBP2', 'CTTNBP2|p.P659Lfs*10|1|0.27|ENSG00000077063|chr7:117791220-117791220|G/-|frameshift_variant'] 122961 23322 VGWLGQMV True PC9_epitope_Rep4 888.45275929608 888.4522149679301 97.966 1 -1.7429997675491082 0.4326185631554234 1.0 ['chr1:89418355-89420191|333|23.34|0.01|11.25|+|0|TE_info:L1PA2,L1PA2_dup101,L1,LINE,donor,-,89412580,89418355|None,GBP1P1|11'] 21466 8508 ERPYWEMTN True NCI_RA007_Epitope_Rep4 1224.5233580370398 1224.52171490379 39.523 3 -1.7430450480488298 0.4326185631554234 1.0 ['nc|ENSG00000145242|P54756-3|EPHA5', 'nc|ENSG00000145242|P54756|EPHA5', 'nc|ENSG00000145242|P54756-2|EPHA5', 'ENSG00000145242|ENST00000613740|EPHA5'] 46037 23393 ISVPLCPLYLR True PC9_epitope_Rep5 1272.72641494804 1272.7247549037902 94.962 3 -1.7430641143271632 0.4326185631554234 1.0 ['ENST00000394833.6_1_4:103265936-103266233:-|nuORF'] 70451 14579 LYRNPKEWTKK True H1975_Epitope_Rep1 1461.8092330552097 1461.80812993586 61.284 2 -1.7430823475803725 0.4326185631554234 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 21537 9058 ERRRSWSYRPW True NCI_RA007_Epitope_Rep1 1577.7963769557298 1577.79472490379 39.238 3 -1.7431473370258652 0.432631249441016 1.0 ['ENSG00000168263|ENST00000382082|KCNV2'] 125045 10063 VLPGGNLG True NCI_RA007_Epitope_Rep4 725.40718900265 725.4066449679301 45.553 1 -1.7431584826033053 0.432631249441016 1.0 ['ENSG00000116288|ENST00000338639|PARK7', 'ENST00000497113.1_1_1:8022845-8031696:+|nuORF', 'ENST00000465354.5_1_1:8022845-8031070:+|nuORF', 'ENST00000460192.5_1_1:8025453-8031070:+|nuORF', 'ENST00000547655.1_1_12:49989013-49989364:+|nuORF'] 120603 15893 VGAGFLYP True H1975_Epitope_Rep1 822.42759009406 822.4270449679301 66.442 1 -1.7432201817433184 0.4326375923710718 1.0 ['ENSG00000100714|ENST00000652337|MTHFD1'] 112774 14162 TPLEEVVKV True PC9_epitope_Rep6 1012.5804619069999 1012.57936993586 66.347 2 -1.743252807106154 0.432650277805726 1.0 ['nc|ENSG00000186510|P51800-2|CLCNKA', 'nc|ENSG00000186510|P51800-3|CLCNKA', 'ENSG00000186510|ENST00000331433|CLCNKA'] 27004 5431 FLLGMDNGMF True PC9_epitope_Rep1 1143.50928819603 1143.50764490379 25.724 3 -1.7432641485081926 0.432650277805726 1.0 ['ENST00000557449.5_1_15:27113915-27159951:+|nuORF'] 48725 17298 KENLGWQKL True PC9_epitope_Rep2 1114.61349337078 1114.6123899358602 71.795 2 -1.7434290277663411 0.4326677994902294 1.0 ['ENSG00000096696|ENST00000379802|DSP', 'DSP|p.R2649Sfs*31|1|0.43|ENSG00000096696|chr6:7585209-7585213|GCTTC/-|frameshift_variant', 'nc|ENSG00000096696|P15924-3|DSP', 'nc|ENSG00000096696|P15924-2|DSP', 'DSP|p.Q1569Kfs*4|1|0.65|ENSG00000096696|chr6:7580894-7580909|GCAGAAGCAGAAGGTG/-|frameshift_variant'] 60719 23382 LIYWQRKI True PC9_epitope_Rep1 1118.66004964038 1118.6589499358602 94.72 2 -1.7435545601957252 0.4326741417280583 1.0 ['ENSG00000257315|ENST00000550078|ZBED6'] 27079 6563 FLPPAPAA True NCI_RA007_Epitope_Rep5 782.4326754744999 782.43156993586 31.907 2 -1.743705941735149 0.43270284168399403 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 107937 4267 TAWYWYQNRHI True NCI_RA007_Epitope_Rep3 1536.7262317072398 1536.7245749037902 23.482 3 -1.743923739019645 0.4327650774132245 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|123|2|sense'] 15134 8114 EAELATARS True H1975_Epitope_Rep1 946.47197408718 946.47086993586 36.155 2 -1.7440329558944607 0.43276808370314895 1.0 ['nc|ENSG00000126016|Q4VCS5-2|AMOT', 'ENSG00000126016|ENST00000371959|AMOT'] 33879 14166 GLWGMGGK True NCI_RA007_Epitope_Rep1 804.3952444199598 804.39469496793 59.137 1 -1.7441396949449348 0.43276808370314895 1.0 ['ENST00000228515.5_1_12:51457285-51457513:-|nuORF'] 86299 5784 QQEYLDTYYNL True NCI_RA007_Epitope_Rep1 1448.6459752675198 1448.64486993586 26.552 2 -1.7441764492933678 0.43276808370314895 1.0 ['ENSG00000162630|ENST00000367434|B3GALT2'] 16982 14113 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 60.976 2 -1.744207616575572 0.43276808370314895 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 39770 21087 HQAPGKGL True H1975_Epitope_Rep2 806.43988611326 806.43878993586 87.287 2 -1.7442962255333854 0.43281913704448916 1.0 ['nc|ENSG00000211957|A0A0C4DH35|IGHV3-35'] 18934 14849 ELEVLSVLPP True H1975_Epitope_Rep1 1094.6223267189798 1094.6212299358601 62.348 2 -1.7444366861750973 0.43282547702350743 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'nc|ENSG00000198198|Q5T011-7|SZT2'] 76060 6408 NRLLMSLFLFF True PC9_epitope_Rep5 1399.76861411319 1399.76695490379 29.626 3 -1.7447421505463536 0.43287168997239084 1.0 ['ENSG00000187764|ENST00000422704|SEMA4D'] 49562 24901 KKKDHLISGLL True PC9_epitope_Rep1 1250.7710566413398 1250.7704749679299 100.69 1 -1.7447468804565014 0.43287168997239084 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 61409 8287 LLEPPAPG True NCI_RA007_Epitope_Rep2 792.4381547777599 792.43704993586 36.874 2 -1.7448142164927911 0.4328731906332085 1.0 ['ENSG00000166189|ENST00000299238|HPS6'] 29907 7400 FWETHRTKNYF True H1975_Epitope_Rep1 1527.72589735407 1527.72480993586 33.469 2 -1.7449183868055966 0.4328731906332085 1.0 ['IL1A|p.G229R|1|0.26|ENSG00000115008|chr2:112775198-112775198|C/G|missense_variant'] 109429 19189 TGRRRRSL True NCI_RA007_Epitope_Rep4 1000.6002433484798 1000.5991499358599 82.962 2 -1.7450238268006315 0.4328825304571365 1.0 ['ENSG00000186806|ENST00000335624|VSIG10L', 'nc|ENSG00000186806|Q86VR7-2|VSIG10L'] 137374 25581 YLKKPGGG True PC9_epitope_Rep2 818.4650382319398 818.46448496793 104.08 1 -1.7450342646521744 0.4328825304571365 1.0 ['ENST00000490711.5_1_6:32137055-32144296:-|nuORF', 'ENSG00000204310|ENST00000375107|AGPAT1'] 86298 5186 QQEYLDTYYNL True H1975_Epitope_Rep3 1448.6459752675198 1448.64486993586 25.044 2 -1.7451343287031302 0.4328825304571365 1.0 ['ENSG00000162630|ENST00000367434|B3GALT2'] 90786 24374 RKRRTRSGPWR True PC9_epitope_Rep3 1454.8443302076598 1454.84269490379 99.068 3 -1.7451656851982877 0.4328825304571365 1.0 ['ENST00000263921.7_2_4:54915461-54930445:-|nuORF'] 26866 20806 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 87.012 2 -1.745246835158357 0.4328825304571365 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 115789 23316 TVLVHLEIKVL True PC9_epitope_Rep6 1262.79620876002 1262.7951099358602 102.79 2 -1.7454637477629056 0.43291122263079657 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 119402 8020 VEPAAPGP True H1975_Epitope_Rep3 736.3755545211999 736.3750049679301 35.821 1 -1.7454805231505683 0.4329142218496787 1.0 ['ENSG00000182087|ENST00000356663|TMEM259', 'nc|ENSG00000182087|Q4ZIN3-2|TMEM259'] 11089 13926 DEAVTLRVPDM True H1975_Epitope_Rep2 1244.607087661 1244.6059899358602 58.714 2 -1.7454914631085456 0.4329142218496787 1.0 ['nc|ENSG00000006118|Q24JP5-2|TMEM132A', 'nc|ENSG00000006118|Q24JP5-3|TMEM132A', 'TMEM132A|p.P768Lfs*40|1|0.1|ENSG00000006118|chr11:60936134-60936134|C/-|frameshift_variant', 'ENSG00000006118|ENST00000453848|TMEM132A'] 24573 18937 FALRVGHGN True H1975_Epitope_Rep2 969.51444803585 969.51334993586 78.61 2 -1.7455080011122073 0.4329142218496787 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'nc|ENSG00000063601|Q13613-2|MTMR1'] 41353 23319 IAMHLRFPF True NCI_RA007_Epitope_Rep1 1130.60590589254 1130.6048099358602 95.989 2 -1.745527266424853 0.4329142218496787 1.0 ['ENST00000592895.5_1_19:1986085-1986331:-|nuORF'] 6384 18789 APRRRKGNRP True NCI_RA007_Epitope_Rep3 1206.7170044362197 1206.71590993586 82.169 2 -1.7456023247521655 0.4329380734713949 1.0 ['ENST00000357060.7_2_10:105990583-105992116:-|nuORF'] 30672 21077 GALKAQTWKH True PC9_epitope_Rep3 1138.62472676082 1138.6236299358602 86.354 2 -1.7456402608067096 0.4329380734713949 1.0 ['ENSG00000088325|ENST00000300403|TPX2', 'nc|ENSG00000088325|Q9ULW0-2|TPX2'] 124169 5628 VLAAPVPP True NCI_RA007_Epitope_Rep5 762.46397560278 762.46286993586 28.336 2 -1.745693576165768 0.43293957241363895 1.0 ['ENST00000531243.2_1_1:40041622-40042411:-|nuORF'] 10688 11039 CSGDDDDDNDD True PC9_epitope_Rep3 1184.3047702012 1184.3036699358602 47.456 2 -1.745818435391747 0.43293957241363895 1.0 ['ENST00000322002.4_1_2:5834175-5834352:+|nuORF'] 124072 24429 VKRLWLALARR True NCI_RA007_Epitope_Rep1 1380.8830071321597 1380.8819099358602 101.22 2 -1.7459065251186223 0.43295708538220834 1.0 ['ENST00000371025.7_1_20:57876485-57899387:+|nuORF', 'ENST00000395654.3_1_20:57876485-57899419:+|nuORF', 'ENST00000311585.11_1_20:57876485-57897473:+|nuORF'] 56285 13682 LDQNRIFDP True H1975_Epitope_Rep1 1116.55637241748 1116.55526993586 57.763 2 -1.7462882455285813 0.4329969490729876 1.0 ['ENST00000488824.1_1_1:110279695-110282569:-|nuORF', 'ENSG00000134202|ENST00000361066|GSTM3', 'ENST00000476321.5_1_1:110279982-110280760:-|nuORF'] 27996 7060 FQVKRQVL True NCI_RA007_Epitope_Rep3 1016.6130994479598 1016.61200993586 34.887 2 -1.7466983868238286 0.43305916273663975 1.0 ['nc|ENSG00000166226|P78371-2|CCT2', 'ENSG00000166226|ENST00000299300|CCT2', 'ENST00000550653.1_1_12:69993626-69995102:+|nuORF'] 96330 6430 SEFDTEREQL True H1975_Epitope_Rep2 1252.5571602631198 1252.55606993586 29.653 2 -1.7468100007144285 0.43307667378161213 1.0 ['ENSG00000077063|ENST00000160373|CTTNBP2', 'CTTNBP2|p.P659Lfs*10|1|0.27|ENSG00000077063|chr7:117791220-117791220|G/-|frameshift_variant'] 23409 21690 EVVHSNNM True NCI_RA007_Epitope_Rep5 928.40726565564 928.40616993586 90.534 2 -1.7468887640771817 0.4330830092530508 1.0 ['ENST00000271469.7_2_1:162569461-162569569:+|nuORF'] 35719 9630 GTSPSEFYFM True H1975_Epitope_Rep2 1164.4797618895598 1164.4786699358601 42.02 2 -1.7471099591891748 0.4331228697547075 1.0 ['ENSG00000137310|ENST00000376257|TCF19', 'ENST00000496421.1_1_6:31129288-31129566:+|nuORF'] 62919 24292 LMYEDSQR True H1975_Epitope_Rep3 1040.45969515132 1040.4585899358601 101.17 2 -1.7473430807506014 0.4331683444877711 1.0 ['ENSG00000136546|ENST00000643258|SCN7A', 'ENST00000424326.5_1_2:167262092-167297919:-|nuORF'] 124769 19901 VLKQFLLQR True NCI_RA007_Epitope_Rep5 1143.7128134892298 1143.7111649037902 83.462 3 -1.7475817381055492 0.4331683444877711 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000562717.1_1_16:50188117-50258568:+|nuORF', 'nc|ENSG00000121274|Q8NDF8-4|TENT4B', 'nc|ENSG00000121274|Q8NDF8-2|TENT4B', 'nc|ENSG00000121274|Q8NDF8|TENT4B', 'nc|ENSG00000121274|Q8NDF8-3|TENT4B', 'nc|ENSG00000121274|Q8NDF8-5|TENT4B', 'ENSG00000121274|ENST00000561678|TENT4B'] 53125 24568 KSILKITK True NCI_RA007_Epitope_Rep3 929.62735252977 929.62624993586 106.28 2 -1.747598325472063 0.4331683444877711 1.0 ['ENSG00000138615|ENST00000261883|CILP', 'CILP|p.G732Afs*25|1|0.49|ENSG00000138615|chr15:65198091-65198091|C/-|frameshift_variant'] 121053 2697 VGFPPFYRW True PC9_epitope_Rep3 1167.58655034695 1167.5854499358602 14.835 2 -1.7476053387410064 0.4331683444877711 1.0 ['ENST00000554012.5_1_14:96176426-96176717:-|nuORF'] 70672 4420 MDEKGKQRNRR True PC9_epitope_Rep1 1416.7368134742796 1416.73516490379 21.887 3 -1.747663958608482 0.4331683444877711 1.0 ['ENSG00000100941|ENST00000216832|PNN'] 69606 3005 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 15.299 3 -1.7476703736497212 0.4331683444877711 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 126241 9900 VPGWLQRYFN True PC9_epitope_Rep4 1278.65094150866 1278.6493049037902 45.732 3 -1.7476851780607785 0.4331683444877711 1.0 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 35967 16014 GVAVGGFP True PC9_epitope_Rep2 702.37007521794 702.36952496793 66.852 1 -1.7477987098858008 0.4331683444877711 1.0 ['nc|ENSG00000115266|O95996-2|APC2', 'nc|ENSG00000115266|O95996-3|APC2', 'ENSG00000115266|ENST00000590469|APC2'] 24808 20752 FCLSVHPV True NCI_RA007_Epitope_Rep3 900.45275929608 900.45166993586 90.381 2 -1.7479252547143673 0.4331683444877711 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 126032 18718 VPAPRRRLQ True NCI_RA007_Epitope_Rep1 1091.6675946323098 1091.66707496793 76.95 1 -1.7479340070713 0.4331683444877711 1.0 ['ENST00000501964.1_1_11:121320521-121323449:-|nuORF'] 133970 19106 WPHRYLTYRYF True NCI_RA007_Epitope_Rep1 1600.7939173442398 1600.79282993586 78.458 2 -1.7479615516185643 0.4331683444877711 1.0 ['ENSG00000174792|ENST00000311623|ODAPH'] 70200 14971 LYLPQEQL True NCI_RA007_Epitope_Rep4 1002.5385970950199 1002.53807496793 65.051 1 -1.7480626080966168 0.4331683444877711 1.0 ['ENSG00000112308|ENST00000378119|C6orf62', 'nc|nan|Q9GZU0-2|C6orf62'] 30298 6844 GAASPRWQWWS True NCI_RA007_Epitope_Rep2 1330.6207040095398 1330.6196099358601 31.239 2 -1.7480702526340592 0.4331683444877711 1.0 ['ENST00000473880.5_1_7:102112843-102113359:+|nuORF'] 78854 9211 PERRRPGR True H1975_Epitope_Rep1 1022.5845932843398 1022.58348993586 40.339 2 -1.7480796349269692 0.4331683444877711 1.0 ['ENSG00000226174|ENST00000451127|TEX22'] 122648 10774 VGTPGRIL True PC9_epitope_Rep1 811.49158733295 811.49048993586 46.33 2 -1.7482177219065016 0.4331683444877711 1.0 ['ENSG00000123136|ENST00000242776|DDX39A', 'DDX39A|p.M320Wfs*66|1|0.23|ENSG00000123136|chr19:14409552-14409552|T/-|frameshift_variant', 'ENST00000590556.1_1_19:14521762-14522332:-|nuORF', 'nc|ENSG00000123136|O00148-3|DDX39A', 'ENST00000589318.5_1_19:14520811-14524032:-|nuORF', 'nc|ENSG00000123136|O00148-2|DDX39A', 'ENSG00000198563|ENST00000396172|DDX39B', 'nc|ENSG00000198563|Q13838-2|DDX39B', 'ENST00000482195.5_1_6:31499071-31508296:-|nuORF', 'ENST00000481456.1_1_6:31503008-31508408:-|nuORF'] 883 11562 ADLRAHRRT True NCI_RA007_Epitope_Rep1 1094.6057226517398 1094.6046299358602 48.943 2 -1.7482491116021979 0.4331683444877711 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 44942 16931 IQETIVPKEPP True NCI_RA007_Epitope_Rep2 1249.6918032611297 1249.69070993586 70.595 2 -1.748356638886186 0.4331858505955174 1.0 ['ENSG00000099995|ENST00000215793|SF3A1', 'SF3A1|p.R511Gfs*103|2|0.39|ENSG00000099995|chr22:30339001-30339001|G/-|frameshift_variant'] 61176 7293 LLDLDGDPL True NCI_RA007_Epitope_Rep2 969.5018772331299 969.50078993586 32.989 2 -1.748594044346204 0.43322570193177884 1.0 ['nc|ENSG00000132694|O15085|ARHGEF11', 'ENSG00000132694|ENST00000368194|ARHGEF11'] 120581 8429 VGAGAGGG True H1975_Epitope_Rep2 544.2605247689601 544.25997496793 37.375 1 -1.7490046191381685 0.43326071169208424 1.0 ['ENSG00000116954|ENST00000373001|RRAGC', 'ENST00000537025.6_1_17:66032291-66032333:+|nuORF'] 38452 22278 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 92.069 2 -1.7490132462116157 0.43326071169208424 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 112452 23430 TNPTAKRQFVQ True PC9_epitope_Rep2 1288.68878356936 1288.68712490379 95.597 3 -1.7491747952600967 0.43326704355015305 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 69093 13932 LVKEGNEAPV True PC9_epitope_Rep4 1054.56587447202 1054.56476993586 61.493 2 -1.749313928802092 0.4332797068418465 1.0 ['nc|ENSG00000136261|Q9Y6E2-2|BZW2', 'ENST00000480517.5_1_7:16705068-16725727:+|nuORF'] 120218 22176 VFMAPPVH True NCI_RA007_Epitope_Rep5 896.4578446765199 896.45674993586 92.442 2 -1.7493966385621962 0.4332797068418465 1.0 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 137530 6156 YLQREWRFLWN True PC9_epitope_Rep4 1609.8153810648096 1609.81372490379 30.705 3 -1.7496699469438366 0.4333195544582109 1.0 ['ENSG00000215262|ENST00000399881|KCNU1', 'KCNU1|p.Y774Sfs*18|1|0.17|ENSG00000215262|chr8:36909525-36909525|A/-|frameshift_variant'] 62858 7883 LMNCCKTVIYF True NCI_RA007_Epitope_Rep3 1333.62327240245 1333.62216993586 38.124 2 -1.7498239105892195 0.43334338796349053 1.0 ['ENST00000361360.3_2_2:105474794-105474911:+|nuORF'] 109573 9642 THCATQCSWD True H1975_Epitope_Rep2 1150.41717871634 1150.41553490379 42.066 3 -1.7498483856091445 0.43334338796349053 1.0 ['OR10K1|p.I65Sfs*80|1|0.39|ENSG00000173285|chr1:158465752-158465752|C/-|frameshift_variant'] 19406 22697 ELPFLTHVN True PC9_epitope_Rep3 1068.5603951687601 1068.55928993586 92.573 2 -1.7502288259615437 0.43342940769041716 1.0 ['ENSG00000178971|ENST00000651323|CTC1'] 67892 20881 LTKRLTEAN True PC9_epitope_Rep4 1044.5927579262 1044.5916699358602 88.475 2 -1.750241178771305 0.43342940769041716 1.0 ['ENSG00000082516|ENST00000285873|GEMIN5'] 137820 26416 YPEYLSNFP True PC9_epitope_Rep5 1128.51277627 1128.51112490379 107.51 3 -1.750277577227857 0.43342940769041716 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 46966 12646 IVNKFREY True H1975_Epitope_Rep1 1067.5763795860698 1067.5752899358602 53.696 2 -1.7505219526790936 0.4334997375503959 1.0 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000466614.1_1_22:30983271-30987820:-|nuORF'] 114636 15541 TSPILDQEDSW True PC9_epitope_Rep1 1289.5775613545297 1289.5764699358601 64.603 2 -1.7507316832242834 0.4334997375503959 1.0 ['nc|ENSG00000170324|Q68DX3-5|FRMPD2', 'nc|ENSG00000170324|Q68DX3-4|FRMPD2', 'nc|ENSG00000150175|Q6IN97|FRMPD2B', 'nc|ENSG00000170324|Q68DX3-2|FRMPD2', 'ENSG00000170324|ENST00000374201|FRMPD2'] 125308 18083 VLRTLKNRIEE True NCI_RA007_Epitope_Rep5 1369.80414767477 1369.8030499358601 76.355 2 -1.7507750161942024 0.4334997375503959 1.0 ['ENSG00000166199|ENST00000302708|ALKBH3', 'ENST00000532962.5_1_11:43918877-43941557:+|nuORF', 'ENST00000530803.5_1_11:43918877-43940621:+|nuORF'] 32558 22814 GGVGDPRGM True NCI_RA007_Epitope_Rep5 844.38613628824 844.38502993586 94.966 2 -1.7508521105227308 0.4334997375503959 1.0 ['ENST00000264220.6_1_4:57273852-57301749:-|nuORF'] 24141 3330 EYSPRRLWWYH True NCI_RA007_Epitope_Rep1 1591.76843087239 1591.76621987172 16.848 4 -1.7509842072740962 0.4334997375503959 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 70633 4850 MAQSKANGSH True PC9_epitope_Rep2 1029.46617751409 1029.46508993586 24.026 2 -1.751048285254535 0.4334997375503959 1.0 ['ENSG00000171729|ENST00000376008|TMEM51'] 31123 22187 GCGHRTAR True H1975_Epitope_Rep2 856.40860306832 856.40750993586 91.696 2 -1.7511055196499115 0.4334997375503959 1.0 ['ENSG00000077009|ENST00000168977|NMRK2', 'nc|ENSG00000077009|Q9NPI5-3|NMRK2'] 21167 5670 EREFEELDTQR True H1975_Epitope_Rep3 1450.6688359704197 1450.66772993586 26.84 2 -1.7512801066190467 0.4334997375503959 1.0 ['nc|ENSG00000175354|P17706-3|PTPN2', 'nc|ENSG00000175354|P17706-2|PTPN2', 'nc|ENSG00000175354|P17706-4|PTPN2', 'ENSG00000175354|ENST00000309660|PTPN2'] 44645 21192 IPKPKRLQEWF True H1975_Epitope_Rep2 1440.82415484336 1440.8224949037901 87.711 3 -1.7512819433547617 0.4334997375503959 1.0 ['EP300|p.Y1467F|1|0.31|ENSG00000100393|chr22:41170519-41170519|A/T|missense_variant'] 83571 7397 QDSFHEDGS True NCI_RA007_Epitope_Rep3 1020.3784676251599 1020.37736993586 36.221 2 -1.7513326678960108 0.4334997375503959 1.0 ['ENSG00000174576|ENST00000311034|NPAS4'] 112512 8048 TNYRLYFKSM True NCI_RA007_Epitope_Rep5 1321.6488929033299 1321.6477899358601 37.645 2 -1.751383787912797 0.4334997375503959 1.0 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 48082 25032 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 103.67 3 -1.751419134508388 0.4334997375503959 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 8677 15662 AVCCEDHI True PC9_epitope_Rep3 888.3469738981998 888.34586993586 65.389 2 -1.7514849621032678 0.4334997375503959 1.0 ['nc|ENSG00000030582|P28799-3|GRN', 'nc|ENSG00000030582|P28799-2|GRN', 'ENSG00000030582|ENST00000053867|GRN'] 48098 28299 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 119.7 3 -1.751552809793813 0.4334997375503959 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 60944 24927 LLAALTAYK True PC9_epitope_Rep2 962.5800679841799 962.57896993586 101.55 2 -1.751572681674056 0.4334997375503959 1.0 ['ENST00000480273.5_1_20:62319266-62327135:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-9|RTEL1', 'nc|ENSG00000258366|Q9NZ71|RTEL1', 'nc|ENSG00000258366|Q9NZ71-7|RTEL1', 'ENSG00000258366|ENST00000360203|RTEL1', 'nc|ENSG00000258366|Q9NZ71-2|RTEL1', 'ENST00000496816.5_1_20:62325699-62327208:+|nuORF', 'nc|ENSG00000258366|Q9NZ71-5|RTEL1', 'ENST00000496281.1_1_20:62323608-62327208:+|nuORF'] 134240 20387 WRRRPRTRR True NCI_RA007_Epitope_Rep1 1338.7969860924197 1338.79588993586 83.513 2 -1.751599911638645 0.4334997375503959 1.0 ['ENST00000586866.5_2_19:1077961-1079783:+|nuORF'] 87381 19181 QTDLIYNL True PC9_epitope_Rep4 978.5022115863 978.50110993586 81.877 2 -1.7516214157337686 0.4334997375503959 1.0 ['nc|ENSG00000113441|Q9UIQ6-3|LNPEP', 'nc|ENSG00000113441|Q9UIQ6-2|LNPEP', 'ENSG00000113441|ENST00000231368|LNPEP'] 128805 21007 VSRPHRGA True H1975_Epitope_Rep3 878.4834822607398 878.4823899358599 87.741 2 -1.7517011297406633 0.4334997375503959 1.0 ['ENST00000407780.7_1_21:45648256-45648535:-|nuORF'] 99451 8969 SLEKPNSR True PC9_epitope_Rep5 929.49304388493 929.49194993586 39.442 2 -1.751717145040263 0.4334997375503959 1.0 ['ENST00000396355.5_1_16:15818316-15818511:+|nuORF'] 124170 7829 VLAAPVPP True PC9_epitope_Rep1 762.46397560278 762.46286993586 34.941 2 -1.7517513697051679 0.4334997375503959 1.0 ['ENST00000531243.2_1_1:40041622-40042411:-|nuORF'] 97503 20810 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 86.167 2 -1.7518358709657642 0.4334997375503959 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 137813 25817 YPEYLSNFP True PC9_epitope_Rep2 1128.51277627 1128.51112490379 105.04 3 -1.7518659745830223 0.4334997375503959 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 69598 1812 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 9.4102 3 -1.7518859614188893 0.4334997375503959 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 42611 7383 IETELTEEELD True NCI_RA007_Epitope_Rep3 1319.59802201559 1319.59692993586 36.167 2 -1.7519020014523403 0.4334997375503959 1.0 ['nc|ENSG00000091137|O43511-2|SLC26A4', 'ENSG00000091137|ENST00000644269|SLC26A4'] 48120 28494 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 119.29 3 -1.751958048051097 0.4334997375503959 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 55297 19333 LARKREQER True NCI_RA007_Epitope_Rep1 1184.6738022115599 1184.67327496793 79.356 1 -1.7521258396891983 0.4334997375503959 1.0 ['ENSG00000141867|ENST00000679869|BRD4'] 111483 20056 TLLKGRGV True PC9_epitope_Rep1 842.5337864980999 842.53268993586 81.972 2 -1.7521813492961267 0.4334997375503959 1.0 ['ENSG00000111679|ENST00000318974|PTPN6', 'nc|ENSG00000111679|P29350-3|PTPN6', 'nc|ENSG00000111679|P29350-4|PTPN6', 'ENST00000536521.5_1_12:7060600-7061341:+|nuORF', 'ENST00000542277.5_1_12:7060600-7062523:+|nuORF', 'ENST00000543744.1_1_12:7060600-7060895:+|nuORF', 'ENST00000540740.5_1_12:7060613-7061159:+|nuORF'] 73623 23550 NGGMLRSS True H1975_Epitope_Rep3 820.3861362882401 820.38502993586 98.26 2 -1.7524467702502706 0.43353956802394406 1.0 ['ENST00000361229.8_1_X:101975660-101975984:+|nuORF'] 32569 12738 GGWPGGHL True NCI_RA007_Epitope_Rep4 779.3714722002699 779.37036993586 56.055 2 -1.7525153991399496 0.4335458941514133 1.0 ['ENST00000309100.7_1_11:65380814-65380982:-|nuORF'] 91012 24227 RLKKKHEL True NCI_RA007_Epitope_Rep2 1050.66619764998 1050.66510993586 101.74 2 -1.752747304395763 0.43356557468569257 1.0 ['nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'nc|ENSG00000139220|O75334-7|PPFIA2', 'nc|ENSG00000139220|O75334-8|PPFIA2'] 41354 22054 IAMHLRFPF True NCI_RA007_Epitope_Rep3 1130.60590589254 1130.6048099358602 95.823 2 -1.7528237663744968 0.43356557468569257 1.0 ['ENST00000592895.5_1_19:1986085-1986331:-|nuORF'] 71270 23329 MGRLPQDL True NCI_RA007_Epitope_Rep5 928.4800366730799 928.47892993586 97.022 2 -1.7528661455009795 0.43356557468569257 1.0 ['ENST00000452089.5_3_7:99950889-99956429:+|nuORF'] 122572 19084 VGTFAWYL True NCI_RA007_Epitope_Rep1 955.4803539429099 955.47980496793 78.373 1 -1.7528942744197165 0.43356557468569257 1.0 ['nc|ENSG00000139914|A5D6W6-2|FITM1', 'ENSG00000139914|ENST00000267426|FITM1'] 114209 5872 TRVFGVYLLWF True PC9_epitope_Rep2 1399.7652429849097 1399.76359490379 27.982 3 -1.7529106720909131 0.43356557468569257 1.0 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000487054.1_1_1:225605673-225607031:-|nuORF'] 114090 24185 TRRHKGKP True PC9_epitope_Rep4 978.5835306551799 978.58242993586 101.51 2 -1.752931038012704 0.43356557468569257 1.0 ['ENST00000306108.9_1_2:29092926-29092998:-|nuORF'] 58173 23454 LESKRLRS True PC9_epitope_Rep5 987.58252759567 987.58197496793 95.199 1 -1.7531172523160967 0.43356557468569257 1.0 ['ENSG00000166813|ENST00000394412|KIF7'] 51898 18876 KKRRHLTPT True NCI_RA007_Epitope_Rep5 1135.69380938015 1135.6927099358602 79.451 2 -1.7531200277741807 0.43356557468569257 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 61629 24447 LLHATLTT True H1975_Epitope_Rep3 868.5018176634801 868.50072993586 101.76 2 -1.753247982832098 0.43356557468569257 1.0 ['ENST00000541199.5_3_6:142623767-142688843:+|nuORF', 'ENST00000435011.6_3_6:142623767-142688843:+|nuORF'] 104385 24423 SSGGGGGG True H1975_Epitope_Rep1 534.2034038156601 534.2028549679301 101.25 1 -1.7533182051014233 0.43356557468569257 1.0 ['nc|ENSG00000120254|Q6UB35-2|MTHFD1L', 'ENSG00000120738|ENST00000239938|EGR1', 'ENST00000405737.2_2_13:41556342-41635296:-|nuORF', 'EGR1|p.S512Cfs*24|1|0.18|ENSG00000120738|chr5:138467978-138467994|TCAGCAGCTTCCCTTCC/-|frameshift_variant', 'ENST00000487509.6_1_16:31191511-31196501:+|nuORF', 'ENST00000369842.8_1_X:153609605-153609698:+|nuORF', 'ENSG00000133265|ENST00000433386|HSPBP1', 'nc|ENSG00000133265|Q9NZL4-2|HSPBP1', 'ENST00000532700.2_16:18911356-18937378:-|nuORF', 'ENST00000545606.5_1_12:67663381-67663543:+|nuORF', 'ENSG00000206557|ENST00000383763|TRIM71', 'CON__P13645', 'ENSG00000186395|ENST00000269576|KRT10', 'nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A', 'ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000511242.1_1_5:112783941-112824318:-|nuORF', 'ENSG00000171444|ENST00000408903|MCC', 'nc|ENSG00000156113|Q12791-7|KCNMA1', 'nc|ENSG00000156113|Q12791-4|KCNMA1', 'nc|ENSG00000156113|Q12791-5|KCNMA1', 'ENSG00000156113|ENST00000286628|KCNMA1', 'nc|ENSG00000156113|Q12791-2|KCNMA1', 'nc|ENSG00000156113|Q12791-3|KCNMA1', 'nc|ENSG00000156113|Q12791-6|KCNMA1', 'KCNMA1|p.E329Kfs*60|1|0.17|ENSG00000156113|chr10:77110319-77110319|C/-|frameshift_variant', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000084731|ENST00000264712|KIF3C', 'ENSG00000120254|ENST00000367321|MTHFD1L', 'ENSG00000141385|ENST00000269143|AFG3L2', 'ENSG00000157106|ENST00000446231|SMG1', 'MN1|p.A841Pfs*6|1|0.1|ENSG00000169184|chr22:27798023-27798023|C/-|frameshift_variant', 'MN1|p.Q1067Rfs*3|1|0.35|ENSG00000169184|chr22:27797344-27797344|T/-|frameshift_variant', 'ENSG00000169184|ENST00000302326|MN1', 'ENSG00000171094|ENST00000389048|ALK', 'ENSG00000171403|ENST00000246662|KRT9', 'ENSG00000179168|ENST00000334928|GGN', 'nc|ENSG00000196405|Q9UI08-5|EVL', 'nc|ENSG00000196405|Q9UI08|EVL', 'ENSG00000196405|ENST00000392920|EVL', 'nc|ENSG00000196405|Q9UI08-4|EVL', 'nc|ENSG00000196405|Q9UI08-3|EVL', 'ENSG00000203782|ENST00000368742|LORICRIN', 'ENSG00000275023|ENST00000621332|MLLT6', 'MLLT6|p.K443Tfs*11|1|0.35|ENSG00000275023|chr17:38716658-38716665|AACGGATG/-|frameshift_variant', 'HSPBP1|p.A166Hfs*70|1|0.13|ENSG00000133265|chr19:55274542-55274542|C/-|frameshift_variant', 'nc|ENSG00000136807|P50750-2|CDK9'] 61017 22230 LLAPHMVP True PC9_epitope_Rep1 876.4891448048 876.48804993586 90.33 2 -1.7533380762710709 0.43356557468569257 1.0 ['ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000149451|Q9BZ11-3|ADAM33'] 94307 19658 RWTGRRSWD True NCI_RA007_Epitope_Rep5 1218.6006372712998 1218.59899490379 82.528 3 -1.7533516883389697 0.43356557468569257 1.0 ['ENST00000222462.2_1_7:120969224-120969682:+|nuORF'] 112743 14049 TPKLEHLD True PC9_epitope_Rep6 951.5025459394699 951.50144993586 65.908 2 -1.7534736406144456 0.43356557468569257 1.0 ['nc|ENSG00000234616|O75564|JRK', 'ENSG00000234616|ENST00000612905|JRK'] 48096 27932 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 117.73 3 -1.753504374651471 0.43356557468569257 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 18487 14583 EKLQHQLDEPK True NCI_RA007_Epitope_Rep2 1363.7095785835897 1363.7084899358601 61.389 2 -1.7535273809343814 0.43356557468569257 1.0 ['ENST00000432132.2_1_9:98909238-98910135:+|nuORF'] 81030 20992 PNYLTQQWQRL True NCI_RA007_Epitope_Rep1 1445.7415474182098 1445.7404499358602 85.908 2 -1.7535288043773254 0.43356557468569257 1.0 ['nc|ENSG00000163291|Q6TCH7-3|PAQR3', 'ENST00000512760.5_1_4:79841695-79860421:-|nuORF', 'nc|ENSG00000163291|Q6TCH7-2|PAQR3', 'ENSG00000163291|ENST00000512733|PAQR3'] 112776 15858 TPLEQRKL True PC9_epitope_Rep6 983.57637958607 983.57528993586 73.27 2 -1.7535729104318545 0.43356557468569257 1.0 ['nc|ENSG00000137500|Q9GZT6-2|CCDC90B', 'ENSG00000137500|ENST00000529689|CCDC90B', 'ENST00000529312.5_1_11:82985712-82996176:-|nuORF', 'ENST00000526631.1_1_11:82985654-82997015:-|nuORF'] 82012 16883 PSTAEPSKFP True H1975_Epitope_Rep2 1059.52367530687 1059.52317496793 70.186 1 -1.7536446111658794 0.43356557468569257 1.0 ['nc|ENSG00000172493|P51825|AFF1', 'nc|ENSG00000172493|P51825-3|AFF1', 'ENSG00000172493|ENST00000395146|AFF1', 'AFF1|p.P608Tfs*61|1|0.22|ENSG00000172493|chr4:87114669-87114670|-/A|frameshift_variant'] 107602 6902 TAGKENHFDMH True NCI_RA007_Epitope_Rep2 1285.55096976721 1285.5498699358602 31.466 2 -1.753652540164544 0.43356557468569257 1.0 ['nc|ENSG00000162086|Q96N20|ZNF75A', 'ENSG00000162086|ENST00000669516|ZNF75A'] 69046 10746 LVIEFSEEYP True PC9_epitope_Rep2 1224.59142051352 1224.5897849037901 46.654 3 -1.753686868947679 0.4335718991101236 1.0 ['ENSG00000119048|ENST00000265339|UBE2B'] 130848 21027 VVGAPRGR True PC9_epitope_Rep6 810.4824196315799 810.48132993586 93.703 2 -1.7538318068391443 0.4336117189942388 1.0 ['nc|ENSG00000204120|Q6Y7W6-4|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-5|GIGYF2', 'ENSG00000204120|ENST00000373563|GIGYF2', 'nc|ENSG00000204120|Q6Y7W6-3|GIGYF2', 'ENST00000463554.5_1_2:233599907-233635753:+|nuORF'] 59450 15420 LGMWLHEV True PC9_epitope_Rep4 983.48987308079 983.48876993586 67.244 2 -1.7539591419250036 0.4336403729135265 1.0 ['ENST00000582783.5_1_19:40826279-40826525:-|nuORF'] 52639 9464 KQEIKRLSTEH True NCI_RA007_Epitope_Rep1 1367.75211210191 1367.75100993586 40.806 2 -1.754087758368378 0.43366902619297504 1.0 ['ENSG00000151491|ENST00000281172|EPS8', 'nc|ENSG00000151491|Q12929-2|EPS8', 'chr12:15662099-15662336|289|10.48|0.17|5.98|-|ENST00000540613|EPS8,EPS8'] 104213 19206 SSDMSAHVTSP True PC9_epitope_Rep5 1117.47098811101 1117.46988993586 78.915 2 -1.7542916757752722 0.433716646198504 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF'] 23570 6418 EYDDQRALEIH True NCI_RA007_Epitope_Rep1 1387.6368075661499 1387.6357099358602 28.989 2 -1.7543991297162307 0.433716646198504 1.0 ['MB21D2-FGF12|1|fusion', 'ENSG00000180611|ENST00000392452|MB21D2'] 120217 11918 VFLYPFLKWWR True H1975_Epitope_Rep3 1553.8547266956498 1553.85362993586 50.995 2 -1.7544659208723477 0.433716646198504 1.0 ['ENST00000524250.5_1_5:154200818-154203152:-|nuORF', 'ENST00000423554.5_1_5:154202945-154230090:-|nuORF', 'nc|ENSG00000170271|Q96IV6-2|FAXDC2', 'ENSG00000170271|ENST00000326080|FAXDC2'] 133608 17433 WIPPCPIIKK True H1975_Epitope_Rep2 1193.69947192421 1193.69836993586 72.347 2 -1.7544664968556307 0.433716646198504 1.0 ['ENST00000215770.5_1_22:24313714-24313753:+|nuORF'] 19767 13382 ELSWRPAI True PC9_epitope_Rep5 970.5236157372199 970.52250993586 56.491 2 -1.7546232787106188 0.43376574082343483 1.0 ['ENST00000587928.5_1_19:10792469-10795138:+|nuORF'] 31034 6353 GAVPPAPW True NCI_RA007_Epitope_Rep5 793.41227438309 793.41116993586 31.112 2 -1.7546311117988218 0.43376574082343483 1.0 ['ENST00000480687.5_1_3:49760143-49760471:-|nuORF'] 16815 613 EFMRSDHLKQ True PC9_epitope_Rep2 1289.61865540421 1289.61700490379 3.4709 3 -1.7547675458891083 0.43376574082343483 1.0 ['ENSG00000171872|ENST00000372299|KLF17'] 29565 24110 FVIFMFFLN True PC9_epitope_Rep6 1176.6041745570399 1176.60253490379 106.34 3 -1.7548187523284633 0.43376574082343483 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 13145 15516 DLSSPGMT True H1975_Epitope_Rep2 806.3480194440201 806.3474749679301 64.838 1 -1.7548342258649328 0.43376574082343483 1.0 ['nc|ENSG00000134686|Q8IXK0|PHC2', 'ENSG00000134686|ENST00000683057|PHC2', 'nc|ENSG00000134686|Q8IXK0-4|PHC2', 'PHC2|p.G541_N542del|1|0.29|ENSG00000134686|chr1:33334222-33334227|GTTTCC/-|inframe_deletion', 'ENST00000493483.5_1_1:33799498-33815372:-|nuORF', 'ENST00000485928.5_1_1:33797943-33815375:-|nuORF'] 61662 20191 LLHLMLKKW True NCI_RA007_Epitope_Rep4 1180.71545634152 1180.7143499358601 87.366 2 -1.7548711866449251 0.43376574082343483 1.0 ['TRPM6|p.E130K|1|0.51|ENSG00000119121|chr9:74840180-74840180|C/T|missense_variant'] 126204 17554 VPGPHSADVPL True PC9_epitope_Rep6 1087.56620882519 1087.5651099358602 80.161 2 -1.7549337623605619 0.4337686983701719 1.0 ['ENST00000396743.7_1_X:48780565-48780950:-|nuORF'] 33163 22311 GKSKRKVN True PC9_epitope_Rep3 915.5613982282699 915.56030993586 91.105 2 -1.7549556876497947 0.4337686983701719 1.0 ['ENSG00000182103|ENST00000329203|FAM181B'] 113904 24698 TRIEQRKKM True NCI_RA007_Epitope_Rep1 1188.6761107106797 1188.67500993586 102.27 2 -1.7550102746281213 0.4337686983701719 1.0 ['nc|ENSG00000100626|Q8N428-2|GALNT16', 'ENSG00000100626|ENST00000448469|GALNT16'] 63005 4560 LNFWWLKRTL True PC9_epitope_Rep1 1375.7764763749497 1375.7748449037902 22.417 3 -1.7550240077390242 0.4337686983701719 1.0 ['ENST00000367166.4_1_6:155619688-155632440:-|nuORF'] 81049 8640 PPAPFGCP True NCI_RA007_Epitope_Rep5 784.3577962820799 784.35724496793 39.906 1 -1.7551500178584416 0.43378577488056436 1.0 ['ENSG00000090470|ENST00000204549|PDCD7'] 21874 8856 ESEIARLEEDK True H1975_Epitope_Rep1 1317.6412242402496 1317.6401299358602 38.987 2 -1.7551696027560857 0.43378577488056436 1.0 ['nc|ENSG00000173588|Q9Y592-2|CEP83', 'ENSG00000173588|ENST00000397809|CEP83'] 1074 7623 AEALTSAW True H1975_Epitope_Rep3 847.40758292547 847.40648993586 34.303 2 -1.755361607859666 0.43378577488056436 1.0 ['ENST00000423996.5_1_3:183963275-183963540:-|nuORF'] 56057 14874 LDLCHTTS True H1975_Epitope_Rep2 888.4011176460401 888.40002993586 62.364 2 -1.7554052198562002 0.43378577488056436 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 81414 21827 PPYTTSHS True NCI_RA007_Epitope_Rep4 888.3977465177602 888.39664993586 94.617 2 -1.7554328583668535 0.43378577488056436 1.0 ['ENSG00000178343|ENST00000319234|SHISA3'] 68875 16303 LVEGFTIKKP True PC9_epitope_Rep2 1130.66994561774 1130.6683049037902 67.954 3 -1.755608015754717 0.43378577488056436 1.0 ['ENSG00000214021|ENST00000685419|TTLL3', 'nc|ENSG00000214021|Q9Y4R7-5|TTLL3', 'nc|ENSG00000214021|Q9Y4R7|TTLL3', 'ENST00000496526.5_1_3:9870593-9876502:+|nuORF', 'ENST00000473661.5_1_3:9867594-9876502:+|nuORF'] 133874 12809 WMPDSQCKECY True PC9_epitope_Rep1 1388.51992953272 1388.5188299358601 54.145 2 -1.7556420622237654 0.43378577488056436 1.0 ['ENSG00000115020|ENST00000264380|PIKFYVE', 'nc|ENSG00000115020|Q9Y2I7-4|PIKFYVE'] 139082 20396 YSLYICPEN True PC9_epitope_Rep2 1100.4848472699998 1100.48374993586 83.879 2 -1.7556854031812887 0.43378577488056436 1.0 ['ENST00000370025.8_1_1:109242753-109242981:+|nuORF'] 65745 19445 LSIDTERRHLR True PC9_epitope_Rep3 1394.77424452882 1394.7725849037902 80.021 3 -1.7558744966015156 0.43380957696171446 1.0 ['ENSG00000174799|ENST00000257287|CEP135'] 81358 13802 PPRRRLCQRRH True PC9_epitope_Rep6 1473.83238562497 1473.83128993586 64.889 2 -1.7559643691653277 0.43380957696171446 1.0 ['ENST00000395824.5_1_17:16472307-16472361:-|nuORF'] 134340 5216 WRYFLPPYTFQ True PC9_epitope_Rep1 1516.7503211967598 1516.74868490379 24.912 3 -1.7560806278799024 0.4338110545584427 1.0 ['ENSG00000023608|ENST00000216294|SNAPC1'] 21430 20121 ERPKELVRKP True H1975_Epitope_Rep2 1250.7459045226597 1250.74426490379 83.383 3 -1.7560977620516023 0.4338110545584427 1.0 ['ENSG00000048162|ENST00000614830|NOP16', 'ENST00000510608.1_1_5:175813700-175815552:-|nuORF', 'nc|ENSG00000048162|Q9Y3C1-3|NOP16', 'nc|ENSG00000048162|Q9Y3C1-2|NOP16'] 4240 24575 AIGHFLCL True NCI_RA007_Epitope_Rep3 872.4578446765199 872.45674993586 106.3 2 -1.7562772294223528 0.4338620204703492 1.0 ['ENSG00000183354|ENST00000399933|KIAA2026'] 101158 10890 SLVQHERIH True NCI_RA007_Epitope_Rep1 1117.59924028897 1117.5981499358602 46.351 2 -1.7563341319330152 0.4338683393977275 1.0 ['ENSG00000278129|ENST00000621650|ZNF8', 'ZNF283|p.T538I|1|0.25|ENSG00000167637|chr19:43848214-43848214|C/T|missense_variant', 'ZNF8|p.P424Afs*3|1|0.2|ENSG00000278129|chr19:58295074-58295075|-/A|frameshift_variant', 'ENSG00000167637|ENST00000618787|ZNF283'] 103490 20973 SRARRRSV True PC9_epitope_Rep6 986.5845932843399 986.58348993586 93.468 2 -1.7566199186781182 0.43387613424556626 1.0 ['ENST00000261776.9_1_16:70834832-70834985:-|nuORF'] 10294 16163 CGYPLVSC True NCI_RA007_Epitope_Rep5 840.35099664948 840.34988993586 68.908 2 -1.7567364149070397 0.43387613424556626 1.0 ['nc|ENSG00000135119|Q96EX2-2|RNFT2'] 7685 6937 ASPLGSTTWH True PC9_epitope_Rep1 1055.5036085686302 1055.5025099358602 31.489 2 -1.7567580540223642 0.43387613424556626 1.0 ['ENST00000533211.5_1_11:66474991-66475177:-|nuORF'] 25123 7231 FDMFPNQFRFV True NCI_RA007_Epitope_Rep1 1446.6754420043399 1446.6743499358602 32.117 2 -1.7569530124665558 0.43388245273331993 1.0 ['ENSG00000143515|ENST00000368489|ATP8B2', 'nc|ENSG00000143515|P98198|ATP8B2', 'nc|ENSG00000143515|P98198-3|ATP8B2'] 31026 15609 GAVGLDLREL True PC9_epitope_Rep2 1041.58185888933 1041.5807699358602 65.318 2 -1.7570219905436153 0.43389993191888304 1.0 ['ENST00000587010.5_1_17:76783725-76794501:-|nuORF', 'ENST00000542802.7_1_17:76793816-76794501:-|nuORF', 'ENST00000592231.5_1_17:76793816-76794505:-|nuORF', 'ENST00000589225.5_1_17:76793816-76794065:-|nuORF'] 92823 24476 RRLKKKKTTIK True H1975_Epitope_Rep3 1398.9510866919798 1398.94998993586 101.88 2 -1.7570835826104465 0.4339014073503644 1.0 ['nc|ENSG00000134207|Q5T7P8-2|SYT6', 'ENSG00000134207|ENST00000610222|SYT6'] 87734 4432 QVERVGDIEE True NCI_RA007_Epitope_Rep4 1172.5673310239997 1172.56622993586 23.411 2 -1.7571127132755289 0.4339014073503644 1.0 ['ENST00000546687.1_1_12:113321187-113328809:+|nuORF', 'ENST00000549913.6_1_12:113307544-113334582:+|nuORF', 'nc|ENSG00000089169|Q9Y2J0-2|RPH3A', 'ENSG00000089169|ENST00000389385|RPH3A'] 38460 16978 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 72.065 2 -1.7571506460871256 0.4339077252739894 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 8355 6413 ATLTLTLR True PC9_epitope_Rep1 887.54401682863 887.54290993586 29.474 2 -1.757245350583106 0.4339140430565941 1.0 ['ENSG00000019505|ENST00000020926|SYT13'] 131223 26311 VVPQLKYKV True PC9_epitope_Rep5 1072.6644663144798 1072.6633699358601 107.03 2 -1.7575257263304553 0.4339315209142449 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 76367 14081 NSFWLNEDLI True NCI_RA007_Epitope_Rep1 1249.59790287629 1249.5968099358602 58.802 2 -1.7576505778089604 0.433934470136595 1.0 ['ENSG00000075407|ENST00000685332|ZNF37A'] 118338 23896 VDFFKTGK True PC9_epitope_Rep3 940.5018176634799 940.50072993586 97.202 2 -1.7576572105776729 0.433934470136595 1.0 ['ENSG00000180432|ENST00000316161|CYP8B1'] 71746 11694 MMLQDQEHHWY True H1975_Epitope_Rep2 1516.62275480848 1516.6216499358602 50.056 2 -1.7577307662496617 0.433934470136595 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 98102 10944 SIAETYGRIE True NCI_RA007_Epitope_Rep4 1137.56660274801 1137.56550993586 48.959 2 -1.757743640880005 0.433934470136595 1.0 ['ENSG00000115998|ENST00000264434|C2orf42'] 104021 8154 SRSNDTLYIP True PC9_epitope_Rep1 1164.57750178488 1164.57640993586 36.194 2 -1.7577681628884738 0.4339407871977145 1.0 ['ENSG00000143387|ENST00000271651|CTSK'] 93478 22896 RSGTGHGD True PC9_epitope_Rep1 785.34162862397 785.3410849679301 92.867 1 -1.7578694065203544 0.433975739585542 1.0 ['ENST00000413052.6_1_1:113217551-113217650:+|nuORF'] 135382 6717 YDLAAATV True H1975_Epitope_Rep3 822.41233395274 822.41122993586 30.793 2 -1.7578906225136417 0.433975739585542 1.0 ['nc|ENSG00000136826|O43474-4|KLF4', 'ENST00000497048.5_1_9:110248034-110250560:-|nuORF', 'ENSG00000136826|ENST00000374672|KLF4', 'nc|ENSG00000136826|O43474|KLF4', 'ENST00000356805.8_1_2:54896150-54896312:+|nuORF'] 95894 11130 SDSRDQVIGHR True NCI_RA007_Epitope_Rep1 1268.6221605615199 1268.62106993586 47.293 2 -1.758161842735016 0.4340106904132213 1.0 ['nc|ENSG00000064607|Q8IX01-4|SUGP2', 'nc|ENSG00000064607|Q8IX01-3|SUGP2', 'ENSG00000064607|ENST00000452918|SUGP2'] 73457 4444 NEVDLLGPNQ True NCI_RA007_Epitope_Rep4 1097.53530261973 1097.5342099358602 23.463 2 -1.7581657451874222 0.4340106904132213 1.0 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 97763 19783 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 83.006 2 -1.7582441620939204 0.43401700627134154 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 29847 16328 FVVLIVPM True PC9_epitope_Rep4 916.54559705176 916.54448993586 70.768 2 -1.7582787651622787 0.4340233219885064 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 48078 4272 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 21.405 3 -1.7584389371873193 0.4340243684727305 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 38304 14729 HFPGQAYRAS True NCI_RA007_Epitope_Rep5 1132.5413910596799 1132.54028993586 63.328 2 -1.7584815589733178 0.4340243684727305 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 81053 7773 PPAPVDPP True H1975_Epitope_Rep2 788.4068546494799 788.40574993586 34.846 2 -1.758522598248822 0.4340243684727305 1.0 ['nc|ENSG00000173889|Q8NDX5-2|PHC3', 'nc|ENSG00000173889|Q8NDX5|PHC3', 'ENSG00000173889|ENST00000495893|PHC3'] 10214 3835 CEAPVSIPC True PC9_epitope_Rep3 917.39867511789 917.39756993586 19.85 2 -1.758567490993377 0.4340243684727305 1.0 ['ENSG00000178163|ENST00000326756|ZNF518B'] 22234 22634 ETDLRILGCEL True NCI_RA007_Epitope_Rep5 1260.6383877892797 1260.63673490379 94.244 3 -1.7585701104134899 0.4340243684727305 1.0 ['ENSG00000163660|ENST00000295926|CCNL1', 'nc|ENSG00000163660|Q9UK58-6|CCNL1', 'nc|ENSG00000163660|Q9UK58-4|CCNL1', 'nc|ENSG00000163660|Q9UK58-5|CCNL1', 'ENST00000471044.1_1_3:156876653-156877916:-|nuORF', 'ENST00000466101.1_1_3:156877139-156877916:-|nuORF'] 55936 22322 LDHGGASL True PC9_epitope_Rep3 768.3766171503601 768.37552993586 91.148 2 -1.7586030021701378 0.4340243684727305 1.0 ['ENST00000356208.9_1_20:55983752-55984013:+|nuORF'] 123891 22308 VKGASGKG True PC9_epitope_Rep6 702.4024379753799 702.4018849679301 98.778 1 -1.7586233580326116 0.4340243684727305 1.0 ['ENST00000358215.8_1_2:220363644-220363875:+|nuORF'] 122406 15168 VGSGQGPQ True NCI_RA007_Epitope_Rep3 728.34531702208 728.34476496793 67.182 1 -1.758624100773813 0.4340243684727305 1.0 ['ENST00000435221.6_1_1:2487266-2487602:+|nuORF'] 85452 21804 QLGGGARM True NCI_RA007_Epitope_Rep5 788.39630704912 788.39520993586 90.997 2 -1.7586360013606364 0.4340243684727305 1.0 ['ENST00000587551.1_1_19:55791573-55791726:-|nuORF'] 83418 23344 QCEECQCWQH True H1975_Epitope_Rep2 1292.4372625379199 1292.43616993586 96.259 2 -1.7587985568488027 0.43406415620641564 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 127690 25241 VRGKCLVS True H1975_Epitope_Rep2 860.49020743396 860.48965496793 103.69 1 -1.7590566355861341 0.4340927855756142 1.0 ['ENST00000307602.8_1_8:42879272-42879317:+|nuORF'] 63251 23500 LPAKKWHWR True PC9_epitope_Rep1 1220.69308110416 1220.6919899358602 95.179 2 -1.759620249632793 0.4341093919077208 1.0 ['nc|ENSG00000121964|Q4AE62-3|GTDC1', 'ENST00000491448.5_1_2:144764747-144969145:-|nuORF', 'nc|ENSG00000121964|Q4AE62-2|GTDC1', 'nc|ENSG00000121964|Q4AE62-4|GTDC1', 'ENSG00000121964|ENST00000682281|GTDC1'] 128582 23809 VSKGRGGL True NCI_RA007_Epitope_Rep3 772.4555361773998 772.45498496793 103.18 1 -1.7596262360977488 0.4341093919077208 1.0 ['ENSG00000160194|ENST00000354250|NDUFV3'] 119024 6678 VEGASARWAA True PC9_epitope_Rep1 1016.5039429217999 1016.50284993586 30.491 2 -1.759680925511038 0.4341093919077208 1.0 ['FNBP4-PVRL1|1|fusion'] 38539 23236 HHEKKKAGYI True NCI_RA007_Epitope_Rep4 1209.6618405455297 1209.66019490379 100.87 3 -1.759720702664713 0.4341093919077208 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.G2269Afs*6|1|0.24|ENSG00000158683|chr7:47827398-47827398|C/-|frameshift_variant', 'PKD1L1|p.R1956Pfs*77|1|0.33|ENSG00000158683|chr7:47836996-47836997|GC/-|frameshift_variant'] 58355 12059 LEVEELKHP True NCI_RA007_Epitope_Rep2 1092.5815245361598 1092.58097496793 51.5 1 -1.7597871259643243 0.4341093919077208 1.0 ['ENSG00000187189|ENST00000420283|TSPYL4'] 52385 23192 KPGKKWKVMT True PC9_epitope_Rep2 1201.7005345533698 1201.69888490379 94.69 3 -1.7599704680865336 0.4341093919077208 1.0 ['ENSG00000188177|ENST00000409871|ZC3H6'] 69116 16357 LVLAPLGNS True PC9_epitope_Rep5 882.5174677276201 882.51636993586 67.915 2 -1.759992790556428 0.4341093919077208 1.0 ['ENST00000369763.4_1_1:111506314-111506515:-|nuORF'] 61934 17629 LLLLVPLIKPA True H1975_Epitope_Rep2 1188.82096695588 1188.8193149037902 73.126 3 -1.760029955785289 0.4341093919077208 1.0 ['ENSG00000106809|ENST00000375561|OGN'] 46036 19487 ISVPLCPLYLR True NCI_RA007_Epitope_Rep5 1272.72641494804 1272.7253099358602 81.844 2 -1.760082943750526 0.4341093919077208 1.0 ['ENST00000394833.6_1_4:103265936-103266233:-|nuORF'] 101973 18924 SPMTAAAC True NCI_RA007_Epitope_Rep3 750.30404645706 750.3029499358599 82.723 2 -1.7600924830619504 0.4341093919077208 1.0 ['ENSG00000185262|ENST00000327490|UBALD2'] 48071 2143 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 11.094 3 -1.7601159418711314 0.4341093919077208 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 124499 13828 VLFHFERNWPW True PC9_epitope_Rep5 1529.7568035595298 1529.75515490379 58.21 3 -1.7601564374818117 0.4341093919077208 1.0 ['ENST00000367568.4_1_6:144509016-144509238:+|nuORF'] 13602 3991 DPRRVLWGDFQ True NCI_RA007_Epitope_Rep2 1387.6996826062298 1387.69804490379 20.161 3 -1.7601723190710248 0.4341093919077208 1.0 ['ENST00000261772.12_1_16:70316640-70323405:-|nuORF'] 72585 5283 MVPYRDSKLTH True NCI_RA007_Epitope_Rep3 1345.68125566077 1345.67959490379 27.788 3 -1.7602803115836922 0.4341093919077208 1.0 ['nc|ENSG00000137807|Q02241-3|KIF23', 'nc|ENSG00000137807|Q02241-2|KIF23', 'nc|ENSG00000137807|Q02241|KIF23', 'ENSG00000137807|ENST00000679126|KIF23'] 122704 20208 VGTVFAFV True PC9_epitope_Rep1 838.4588902223398 838.45778993586 82.559 2 -1.7602921507237967 0.4341093919077208 1.0 ['ENST00000489669.1_1_7:21943673-21945126:-|nuORF'] 92821 23832 RRLKHPQA True H1975_Epitope_Rep3 1004.5991807193199 1004.59808993586 99.378 2 -1.7605056539350141 0.43415548341755633 1.0 ['ENSG00000167880|ENST00000301607|EVPL', 'EVPL|p.L696Efs*65|1|0.15|ENSG00000167880|chr17:76015052-76015053|GC/-|frameshift_variant', 'ENST00000587569.5_1_17:74014525-74023279:-|nuORF', 'ENSG00000214860|ENST00000399134|EVPLL'] 90043 22162 RGGPVRVA True PC9_epitope_Rep1 810.4824196315799 810.48132993586 90.063 2 -1.7606662651638176 0.43415548341755633 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 86560 21259 QRAQQAVPGPR True PC9_epitope_Rep6 1206.6581521474197 1206.6570499358602 94.625 2 -1.7606810435432678 0.43416179554682965 1.0 ['TSPY1|p.G101R|1|0.24|ENSG00000258992|chrY:9467301-9467301|G/C|missense_variant'] 10368 18889 CITPKRRLTR True PC9_epitope_Rep6 1242.7342942931398 1242.73264490379 85.304 3 -1.7607057260260335 0.434168107535278 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 122624 21264 VGTLQSTK True PC9_epitope_Rep4 832.46543215476 832.4648849679301 89.961 1 -1.7608299601074067 0.4341744193829061 1.0 ['ENST00000583350.1_1_18:14377547-14378720:-|nuORF'] 93591 9399 RSWVYSPLHY True NCI_RA007_Epitope_Rep4 1306.64585612822 1306.64474993586 43.008 2 -1.7609424406059182 0.4341836677783851 1.0 ['ENSG00000186111|ENST00000335312|PIP5K1C', 'PIP5K1C|p.E644D|1|0.11|ENSG00000186111|chr19:3633509-3633509|C/G|missense_variant'] 71475 15685 MKIYKFLLQHF True PC9_epitope_Rep5 1466.8108132783398 1466.8097099358602 65.345 2 -1.760982769149485 0.4341836677783851 1.0 ['NCAPD3|p.E1105Q|1|0.12|ENSG00000151503|chr11:134168529-134168529|C/G|missense_variant'] 131573 23056 VVVSDRRL True PC9_epitope_Rep2 942.5610638751 942.55996993586 94.178 2 -1.7610619394256684 0.4341836677783851 1.0 ['ENSG00000144589|ENST00000456909|STK11IP'] 48095 26772 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 111.51 3 -1.7610685516372409 0.4341836677783851 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 69596 1668 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 8.669 3 -1.7610905997842254 0.4341836677783851 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 18585 6788 ELADKNVPN True NCI_RA007_Epitope_Rep1 998.50327421546 998.50216993586 30.411 2 -1.7613181109278648 0.4342345959933967 1.0 ['nc|ENSG00000101278|Q9NQ39|RPS10P5', 'ENST00000480942.1_1_6:34392413-34392935:-|nuORF', 'ENST00000439253.1_1_9:90631298-90631598:+|nuORF', 'ENST00000439139.1_1_1:158165752-158165914:-|nuORF', 'ENSG00000124614|ENST00000648437|RPS10', 'chr6:34425221-34425583|502|33.66|0.0|21.68|-|ENST00000494077|RPS10-NUDT3,RPS10', 'ENST00000440748.1_1_7:37415149-37415623:+|nuORF'] 121996 14289 VGQGAGSE True NCI_RA007_Epitope_Rep3 703.31368254063 703.3131349679301 63.529 1 -1.7614821347956178 0.4342360630869788 1.0 ['ENST00000450514.5_1_6:33218411-33219299:+|nuORF', 'ENST00000427196.1_1_6:33218396-33219400:+|nuORF'] 57999 10309 LEQYKIDNK True PC9_epitope_Rep3 1149.6029882567298 1149.60188993586 44.599 2 -1.7614846518244502 0.4342360630869788 1.0 ['nc|ENSG00000197980|Q6ZMV7|LEKR1', 'ENST00000470811.5_1_3:156544101-156697065:+|nuORF', 'ENSG00000197980|ENST00000356539|LEKR1'] 3291 9191 AGGHRSLC True H1975_Epitope_Rep1 799.37590595771 799.37480993586 40.261 2 -1.7615773528408356 0.43424237354302603 1.0 ['ENST00000305963.2_1_X:135053232-135055898:-|nuORF'] 5678 10759 APALRPLGA True PC9_epitope_Rep3 864.5181364339599 864.51702993586 46.34 2 -1.7617034934857048 0.43427099134469527 1.0 ['nc|ENSG00000221949|Q8N7H1|LINC01465'] 16049 15579 EEALQKAA True PC9_epitope_Rep4 858.4446967101799 858.44358993586 67.845 2 -1.761772955417744 0.43427730127039715 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C', 'VPS13C|p.D506Nfs*15|2|0.25|ENSG00000129003|chr15:61991059-61991062|TATC/-|frameshift_variant'] 114497 4756 TSFLVRVL True NCI_RA007_Epitope_Rep4 933.5647522732099 933.56364993586 24.727 2 -1.7618147001567894 0.4342787673295486 1.0 ['ENST00000528797.5_1_11:57414176-57414477:-|nuORF'] 137755 13478 YNLYIVENPHY True PC9_epitope_Rep5 1423.6772158261501 1423.67610993586 56.86 2 -1.7618170707164549 0.4342787673295486 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 129675 20874 VTIHQEPFV True PC9_epitope_Rep6 1068.56039516876 1068.55928993586 93.065 2 -1.7619682190063017 0.4342962302029891 1.0 ['nc|ENSG00000176884|Q05586-2|GRIN1', 'nc|ENSG00000176884|Q05586-3|GRIN1', 'nc|ENSG00000176884|Q05586-7|GRIN1', 'nc|ENSG00000176884|Q05586-4|GRIN1', 'ENSG00000176884|ENST00000371561|GRIN1', 'nc|ENSG00000176884|Q05586-6|GRIN1', 'nc|ENSG00000176884|Q05586-5|GRIN1'] 135363 23329 YDFNSYWRV True NCI_RA007_Epitope_Rep3 1248.55637241748 1248.55526993586 101.32 2 -1.762159186969521 0.43431808803684746 1.0 ['ENSG00000010404|ENST00000340855|IDS', 'ENST00000324799.4_1_X:148606549-148607579:+|nuORF', 'nc|ENSG00000241489|P22304-3|IDS', 'nc|ENSG00000241489|P22304-2|IDS'] 79185 18427 PGEIVSLGIL True NCI_RA007_Epitope_Rep2 996.5855472874399 996.58444993586 76.443 2 -1.7621683648770203 0.43431808803684746 1.0 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 54844 11070 LAGARGPA True H1975_Epitope_Rep1 711.4027723285499 711.40222496793 47.544 1 -1.7621944746492997 0.43431808803684746 1.0 ['ENST00000579650.5_1_17:27038161-27038248:-|nuORF'] 32149 22383 GFCPAVLC True H1975_Epitope_Rep2 808.3611674103599 808.36006993586 92.504 2 -1.7622544500198292 0.43431808803684746 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 90309 23717 RHYRRLALL True NCI_RA007_Epitope_Rep4 1196.7254438615998 1196.7243499358601 102.84 2 -1.7623282095560662 0.43431808803684746 1.0 ['ENSG00000187581|ENST00000342144|COX8C'] 97703 14113 SHECGWCG True NCI_RA007_Epitope_Rep3 877.2847079948099 877.28415496793 62.805 1 -1.7624371004285917 0.43431808803684746 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.A1065Pfs*28|1|0.5|ENSG00000105429|chr19:42352298-42352298|T/-|frameshift_variant'] 58598 9804 LFFFFFFL True PC9_epitope_Rep4 1126.5891761158998 1126.58752490379 45.352 3 -1.7625623489889928 0.43431808803684746 1.0 ['ENST00000499247.2_1_17:48941386-48941458:-|nuORF', 'ENST00000272462.2_1_2:110841508-110841715:-|nuORF', 'ENST00000590628.1_1_19:28296947-28297304:+|nuORF', 'ENST00000549755.1_1_12:116445119-116445476:-|nuORF', 'ENST00000590135.5_1_19:36234478-36235075:-|nuORF', 'ENST00000586476.5_1_19:36234478-36235258:-|nuORF', 'ENST00000336967.7_1_19:54378000-54378504:+|nuORF'] 135361 5721 YDEVFMAFA True NCI_RA007_Epitope_Rep2 1091.4633835494299 1091.46228993586 26.87 2 -1.7627764267050567 0.4343593174974908 1.0 ['MGST1|p.D9Y|1|0.31|ENSG00000008394|chr12:16354277-16354277|G/T|missense_variant'] 130778 22231 VVEHVLPH True PC9_epitope_Rep6 928.51305105352 928.51194993586 98.469 2 -1.762913922242259 0.4343593174974908 1.0 ['ENSG00000119392|ENST00000309971|GLE1', 'nc|ENSG00000119392|Q53GS7-2|GLE1'] 8907 20485 AVGHHISE True NCI_RA007_Epitope_Rep3 848.4140652882401 848.41296993586 89.249 2 -1.762928392109549 0.4343593174974908 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 100305 12810 SLLVSSPGVP True H1975_Epitope_Rep3 954.5385970950199 954.53750993586 54.493 2 -1.763060762823924 0.4343942367740209 1.0 ['ENST00000307533.10_1_4:6675805-6675937:+|nuORF'] 82693 24610 PVPDAICC True H1975_Epitope_Rep1 816.3509966494801 816.34988993586 101.97 2 -1.763108821314575 0.4343942367740209 1.0 ['nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'TTC3|p.E1565Kfs*6|1|0.26|ENSG00000182670|chr21:37182841-37182841|A/-|frameshift_variant', 'ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 111228 12967 TLGEIPTLVF True PC9_epitope_Rep6 1088.61176203528 1088.6106699358602 61.438 2 -1.7631324124495933 0.4343956999799273 1.0 ['ENSG00000170871|ENST00000307659|KIAA0232'] 30732 20275 GANHMYPMT True NCI_RA007_Epitope_Rep5 1020.41572216436 1020.41462993586 84.929 2 -1.7631393319747197 0.4343956999799273 1.0 ['ENST00000482108.1_2_7:94295726-94295804:+|nuORF'] 116477 9034 TYCSKAFR True PC9_epitope_Rep5 974.4643866089399 974.46328993586 39.694 2 -1.7633111040409155 0.43440831437619876 1.0 ['VEZF1|p.P489Lfs*4|1|0.46|ENSG00000136451|chr17:57974549-57974573|GGGGCGGCTAATGTCATAGGTGTGG/-|frameshift_variant', 'ENSG00000136451|ENST00000581208|VEZF1'] 125217 15240 VLQPQRVL True PC9_epitope_Rep2 951.5865503469498 951.58544993586 63.89 2 -1.7634301936785142 0.43440831437619876 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 74909 24016 NLRYIVKWRRR True PC9_epitope_Rep1 1558.9320825828997 1558.93098993586 97.186 2 -1.7635903135402133 0.4344160840330512 1.0 ['nc|ENSG00000163531|O94856|NFASC', 'nc|ENSG00000163531|O94856-8|NFASC', 'nc|ENSG00000163531|O94856-5|NFASC', 'nc|ENSG00000163531|O94856-13|NFASC', 'nc|ENSG00000163531|O94856-7|NFASC', 'ENSG00000163531|ENST00000339876|NFASC', 'nc|ENSG00000163531|O94856-6|NFASC', 'nc|ENSG00000163531|O94856-11|NFASC', 'nc|ENSG00000163531|O94856-3|NFASC', 'nc|ENSG00000163531|O94856-10|NFASC', 'nc|ENSG00000163531|O94856-12|NFASC', 'nc|ENSG00000163531|O94856-4|NFASC', 'ENST00000512826.5_1_1:204926851-204957975:+|nuORF', 'ENST00000404977.6_1_1:204937408-204955114:+|nuORF'] 61908 17661 LLLLFLVLRG True PC9_epitope_Rep3 1155.7743511166298 1155.7726949037901 73.123 3 -1.763638124436909 0.4344160840330512 1.0 ['nc|ENSG00000143552|Q5VU65-2|NUP210L', 'ENSG00000143552|ENST00000368559|NUP210L'] 42780 3455 IFICSEYW True PC9_epitope_Rep2 1059.47355431031 1059.4724499358601 18.57 2 -1.7636439002194788 0.4344160840330512 1.0 ['ENST00000356384.4_1_9:137328607-137328931:+|nuORF'] 20099 9044 ENILTNYENQ True H1975_Epitope_Rep3 1236.5622456435601 1236.5611499358602 39.775 2 -1.763778977349623 0.4344446922390723 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant', 'DST|p.S2362C|2|0.2|ENSG00000151914|chr6:56606910-56606910|G/C|missense_variant'] 103099 23574 SQLLLPLPAC True PC9_epitope_Rep5 1053.58925276889 1053.5881499358602 95.662 2 -1.7639998216345756 0.4344844504410076 1.0 ['ENST00000519574.1_1_2:219125758-219128073:+|nuORF'] 62117 22377 LLPCLHSA True PC9_epitope_Rep6 852.45275929608 852.45166993586 99.043 2 -1.764045680787768 0.4344859114882419 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 137077 21001 YLALKNIS True H1975_Epitope_Rep2 920.53311779176 920.53202993586 86.931 2 -1.764053720927754 0.4344859114882419 1.0 ['ENSG00000052841|ENST00000039989|TTC17', 'nc|ENSG00000052841|Q96AE7-2|TTC17'] 49552 12030 KKHQNMYRLAM True H1975_Epitope_Rep2 1418.7274946605398 1418.7263899358602 51.354 2 -1.7640702707907627 0.43449221711788055 1.0 ['nc|ENSG00000205560|Q92523-4|CPT1B', 'nc|ENSG00000205560|Q92523-3|CPT1B', 'ENSG00000205560|ENST00000312108|CPT1B'] 117506 19939 VAETRKRKGLK True NCI_RA007_Epitope_Rep1 1284.79900272468 1284.7979099358602 81.762 2 -1.7641697407319041 0.43450290441627365 1.0 ['ENSG00000167658|ENST00000309311|EEF2'] 56059 21381 LDLCHTTS True PC9_epitope_Rep3 888.4011176460401 888.40002993586 87.541 2 -1.7644180923898432 0.43450290441627365 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 135979 20800 YFEGIHLD True NCI_RA007_Epitope_Rep5 992.46034677432 992.45924993586 86.986 2 -1.7644216559337218 0.43450290441627365 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ATAD5|p.P1832L|1|0.17|ENSG00000176208|chr17:30894873-30894873|C/T|missense_variant'] 122219 9007 VGRPAQPP True PC9_epitope_Rep6 820.4555361773998 820.45442993586 44.674 2 -1.7644717937872074 0.43450290441627365 1.0 ['ENST00000517894.5_3_8:143530803-143545560:+|nuORF'] 10551 15308 CPWPLVIN True PC9_epitope_Rep5 940.48405942436 940.4835149679301 63.892 1 -1.7645120417406444 0.43450290441627365 1.0 ['nc|ENSG00000151148|Q7Z3V4-2|UBE3B'] 97485 20256 SGLSTWIG True H1975_Epitope_Rep3 819.41266830591 819.41156993586 84.713 2 -1.7645314446929075 0.43450290441627365 1.0 ['nc|ENSG00000164707|Q9UKG4|SLC13A4', 'ENSG00000164707|ENST00000682651|SLC13A4', 'ENST00000471405.5_1_7:135366313-135386730:-|nuORF'] 94054 16212 RVRSWARVISH True NCI_RA007_Epitope_Rep2 1365.77418495917 1365.77308993586 67.79 2 -1.764589368311839 0.43450290441627365 1.0 ['ENST00000602622.5_1_16:67692761-67693112:-|nuORF'] 85029 21388 QIHIKPGA True NCI_RA007_Epitope_Rep4 862.5024863698198 862.50138993586 92.715 2 -1.7648547699394255 0.43455380635954155 1.0 ['ENSG00000105202|ENST00000221801|FBL', 'ENST00000599159.1_1_19:40329665-40336940:-|nuORF'] 66520 22671 LSSEGRVP True PC9_epitope_Rep3 843.4450310633499 843.4444849679301 92.475 1 -1.7649048527413438 0.4345775637166366 1.0 ['ENST00000595753.5_1_19:16664089-16664293:-|nuORF'] 80411 24854 PLIYILQN True H1975_Epitope_Rep2 972.56441792004 972.56332993586 102.17 2 -1.7649160162498454 0.4345775637166366 1.0 ['OR11H1|p.S295I|1|0.2|ENSG00000130538|chr22:15529075-15529075|G/T|missense_variant'] 90395 15524 RILIVHLKR True H1975_Epitope_Rep2 1146.7713314248601 1146.76969490379 64.868 3 -1.7651549956747168 0.4345950164446179 1.0 ['ENSG00000134588|ENST00000511190|USP26'] 5212 10557 ALPTVASK True H1975_Epitope_Rep3 785.4647038787699 785.4641549679301 45.674 1 -1.7651902358736584 0.43460132001427043 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'PATJ|p.P937Rfs*9|2|0.25|ENSG00000132849|chr1:61864607-61864607|C/-|frameshift_variant'] 106009 5404 SVLLVLLLVI True PC9_epitope_Rep3 1080.75221868972 1080.75112993586 25.86 2 -1.7652470137513314 0.4346105394588689 1.0 ['ENSG00000143502|ENST00000366878|SUSD4', 'nc|ENSG00000143502|Q5VX71-2|SUSD4'] 4988 19023 ALKRCKFLY True NCI_RA007_Epitope_Rep1 1140.6477707045199 1140.64717496793 78.137 1 -1.7652834207927492 0.4346105394588689 1.0 ['ENST00000301332.2_1_8:145699090-145699315:+|nuORF'] 101193 23284 SLVVAFICKLH True PC9_epitope_Rep5 1228.7002002002 1228.6991099358602 94.546 2 -1.7652917511306914 0.4346105394588689 1.0 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant'] 32946 7795 GISDRSIELEW True NCI_RA007_Epitope_Rep3 1303.6408303174298 1303.63972993586 37.785 2 -1.765372005695832 0.4346105394588689 1.0 ['nc|ENSG00000116147|Q92752-2|TNR', 'TNR|p.D691Efs*23|1|0.14|ENSG00000116147|chr1:175366117-175366119|AGG/T|frameshift_variant', 'ENSG00000116147|ENST00000367674|TNR', 'TNR|p.S583Mfs*29|1|0.13|ENSG00000116147|chr1:175386061-175386062|-/A|frameshift_variant'] 27055 12017 FLNWFDERAWY True NCI_RA007_Epitope_Rep5 1545.70409928033 1545.70300993586 52.883 2 -1.7653734466392013 0.4346105394588689 1.0 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 56440 4732 LDSLPSAP True NCI_RA007_Epitope_Rep2 798.41233395274 798.41122993586 23.036 2 -1.7654237925505707 0.43462314526827417 1.0 ['ENST00000445935.5_2_21:47737957-47742843:-|nuORF'] 57255 11040 LEFVMAEW True H1975_Epitope_Rep2 1023.4735543103099 1023.47244993586 47.495 2 -1.7654854542690142 0.43462314526827417 1.0 ['ENSG00000198700|ENST00000361565|IPO9'] 16628 6853 EESKTGDEES True H1975_Epitope_Rep2 1109.4360420709297 1109.43494993586 31.278 2 -1.7656925814812798 0.4346628912868991 1.0 ['ENSG00000176208|ENST00000321990|ATAD5'] 2736 5086 AETVAAAAPTP True PC9_epitope_Rep5 997.5080252427299 997.50692993586 24.589 2 -1.7658283005525448 0.434691488768742 1.0 ['ENST00000537063.1_1_12:109915501-109915567:+|nuORF'] 20558 6019 EQDLVWKFRYY True NCI_RA007_Epitope_Rep1 1545.76161415645 1545.76050993586 27.454 2 -1.7658680751486948 0.4346944007847596 1.0 ['ENSG00000078142|ENST00000262039|PIK3C3'] 60976 25461 LLAFAKNL True PC9_epitope_Rep5 888.54328855264 888.54218993586 103.17 2 -1.766151754379314 0.4346944007847596 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 133484 12542 WGRVVALL True PC9_epitope_Rep4 912.5545219426798 912.55342993586 56.063 2 -1.7661846262808913 0.4346944007847596 1.0 ['ENSG00000030110|ENST00000374467|BAK1'] 86896 18227 QRRRRRQVQ True NCI_RA007_Epitope_Rep5 1281.7602662305299 1281.75862490379 76.918 3 -1.7662690526072597 0.4346944007847596 1.0 ['CCDC120|p.S349Pfs*4|1|0.56|ENSG00000147144|chrX:49067264-49067264|T/-|frameshift_variant', 'nc|ENSG00000147144|Q96HB5-2|CCDC120', 'nc|ENSG00000147144|Q96HB5|CCDC120', 'nc|ENSG00000147144|Q96HB5-5|CCDC120', 'nc|ENSG00000147144|Q96HB5-3|CCDC120', 'ENSG00000147144|ENST00000603986|CCDC120', 'ENST00000603906.1_1_X:48916566-48926191:+|nuORF'] 77060 4788 NWDKEKLMERY True H1975_Epitope_Rep3 1510.7238487487398 1510.72274993586 23.543 2 -1.7666435682383403 0.4347133047975745 1.0 ['ENSG00000166233|ENST00000379887|ARIH1'] 38981 16326 HKAHACIM True NCI_RA007_Epitope_Rep4 909.43131265885 909.43020993586 70.794 2 -1.766653454847479 0.4347133047975745 1.0 ['ENST00000464678.5_1_22:51208306-51220722:-|nuORF', 'nc|ENSG00000144134|Q9UNT1|RABL2B', 'ENSG00000079974|ENST00000691320|RABL2B', 'nc|ENSG00000144134|Q9UNT1-3|RABL2B', 'ENST00000477218.1_1_2:114392665-114398608:+|nuORF', 'nc|ENSG00000144134|Q9UBK7|RABL2A', 'ENSG00000144134|ENST00000683472|RABL2A', 'nc|ENSG00000144134|Q9UBK7-3|RABL2A', 'ENST00000465711.5_1_2:114386183-114394926:+|nuORF'] 70452 14575 LYRNPKEWTKK True H1975_Epitope_Rep3 1461.8092330552097 1461.80812993586 61.43 2 -1.7666740242140466 0.4347133047975745 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 45120 6599 IQTFTVFF True NCI_RA007_Epitope_Rep2 1001.5222187548899 1001.52112993586 30.277 2 -1.766709209450523 0.4347147602380899 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1086Rfs*15|1|0.23|ENSG00000187323|chr18:53450522-53450522|C/-|frameshift_variant', 'DCC|p.S467Y|1|0.61|ENSG00000187323|chr18:53157494-53157494|C/A|missense_variant'] 53188 12439 KSVPPKPA True PC9_epitope_Rep3 822.49633836022 822.49524993586 52.872 2 -1.7667369133980937 0.4347147602380899 1.0 ['ENSG00000166341|ENST00000299441|DCHS1'] 13520 25067 DPGLRGPLHW True PC9_epitope_Rep3 1146.5934266325398 1146.59179490379 101.77 3 -1.7669220872547908 0.43473220754611824 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 62654 25116 LLVTCYDFFL True PC9_epitope_Rep5 1232.61513316356 1232.6140299358601 101.75 2 -1.7669472540776348 0.43473850818137233 1.0 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|123|1|anti-sense'] 59741 13561 LGVLREGL True PC9_epitope_Rep4 855.5178020807899 855.51670993586 60.058 2 -1.7670760489438344 0.4347448086761706 1.0 ['ENSG00000146909|ENST00000275820|NOM1'] 64794 23449 LRVLLRREDV True PC9_epitope_Rep1 1267.7724536236701 1267.7707949037901 94.981 3 -1.7674187632889824 0.43478454713658354 1.0 ['TCL1A|p.V57I|1|0.39|ENSG00000100721|chr14:95712348-95712348|C/T|missense_variant', 'ENST00000554119.5_2_14:96177182-96178754:-|nuORF', 'ENSG00000100721|ENST00000402399|TCL1A'] 75614 21209 NQSDHTST True H1975_Epitope_Rep2 888.3573382577601 888.35624993586 87.776 2 -1.7675146744243972 0.43478600089166297 1.0 ['nc|ENSG00000165300|O94991-2|SLITRK5', 'ENSG00000165300|ENST00000683689|SLITRK5'] 117646 21739 VAIGRRDL True PC9_epitope_Rep4 898.5348491272599 898.53374993586 91.814 2 -1.7675942534067626 0.43478600089166297 1.0 ['nc|ENSG00000166839|Q495B1-2|ANKDD1A', 'nc|ENSG00000166839|Q495B1-1|ANKDD1A', 'ENSG00000166839|ENST00000319580|ANKDD1A'] 43707 19630 IIQQRRQIIG True NCI_RA007_Epitope_Rep1 1223.74623887583 1223.7445949037901 80.547 3 -1.7676649161235911 0.43478745458193085 1.0 ['ENSG00000101871|ENST00000317552|MID1', 'nc|ENSG00000101871|O15344-2|MID1', 'MID1|p.I313Lfs*6|1|0.51|ENSG00000101871|chrX:10482540-10482556|TGTTCCGCTTGGGAGAT/-|frameshift_variant'] 10202 10907 CDPSAPLA True NCI_RA007_Epitope_Rep2 772.34254014076 772.3419949679301 47.033 1 -1.7676671327069966 0.43478745458193085 1.0 ['ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ADGRB1|p.D708Tfs*49|1|0.15|ENSG00000181790|chr8:142481700-142481700|G/-|frameshift_variant'] 108875 6613 TERQDFHQW True H1975_Epitope_Rep1 1245.5526840193697 1245.5515899358602 30.493 2 -1.7679273601510674 0.43480538004657954 1.0 ['ENSG00000187741|ENST00000389301|FANCA', 'nc|ENSG00000187741|O15360-3|FANCA'] 81588 18874 PRLPRSTT True NCI_RA007_Epitope_Rep5 926.5297637468201 926.52866993586 79.443 2 -1.7679292013083572 0.43480538004657954 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 38202 21524 HETGHVLG True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 89.874 2 -1.7679336243278758 0.43480538004657954 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 57717 7253 LENKEHLWKM True NCI_RA007_Epitope_Rep1 1326.67544200434 1326.6743499358602 32.203 2 -1.7679682886047006 0.43480538004657954 1.0 ['nc|ENSG00000080345|Q5UIP0-2|RIF1', 'ENSG00000080345|ENST00000444746|RIF1'] 95940 3976 SDYSFSVIAMS True H1975_Epitope_Rep3 1205.52744035797 1205.52634993586 20.421 2 -1.768059404257608 0.43480538004657954 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 86407 13947 QQPDIIFNG True PC9_epitope_Rep1 1030.5083595959 1030.50777496793 58.483 1 -1.7680972807774955 0.43480538004657954 1.0 ['PCDH10|p.S869F|1|0.49|ENSG00000138650|chr4:133152746-133152746|C/T|missense_variant'] 52211 1917 KMMIDMLYFV True PC9_epitope_Rep3 1289.6222097732898 1289.62057490379 10.54 3 -1.7681379912636654 0.43480538004657954 1.0 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'TRPM1|p.S1552Vfs*9|1|0.19|ENSG00000134160|chr15:31001980-31001980|T/-|frameshift_variant', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1'] 108165 4782 TDSPAATVL True NCI_RA007_Epitope_Rep4 873.44436235701 873.44326993586 24.83 2 -1.7683804870361233 0.43480538004657954 1.0 ['nc|ENSG00000019144|Q86UU1-3|PHLDB1', 'ENST00000532517.5_1_11:118498004-118527530:+|nuORF', 'nc|ENSG00000019144|Q86UU1-2|PHLDB1', 'ENSG00000019144|ENST00000600882|PHLDB1'] 134448 23892 WTIFLFLRWVL True PC9_epitope_Rep1 1492.8594777229198 1492.85782490379 96.702 3 -1.76840436475425 0.43480538004657954 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 140931 18492 YYYRDRDWRWV True NCI_RA007_Epitope_Rep1 1676.7848092125198 1676.78370993586 76.069 2 -1.7684165651614936 0.43480538004657954 1.0 ['ENSG00000243811|ENST00000216099|APOBEC3D'] 64194 5612 LQIDIPVEQP True NCI_RA007_Epitope_Rep5 1150.6233893481399 1150.6217549037901 28.275 3 -1.7685903536925378 0.43480538004657954 1.0 ['RGS22|p.A1101P|1|0.47|ENSG00000132554|chr8:99981996-99981996|C/G|missense_variant'] 122779 6619 VGVGWEGL True NCI_RA007_Epitope_Rep5 815.4177536863499 815.41664993586 32.121 2 -1.7685959790466066 0.43480538004657954 1.0 ['ENST00000370110.5_1_10:103541168-103541297:-|nuORF'] 137814 26029 YPEYLSNFP True PC9_epitope_Rep2 1128.51277627 1128.51112490379 106.01 3 -1.7686746718547963 0.43480538004657954 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 5681 2680 APAPAPAVTG True PC9_epitope_Rep3 850.45486747106 850.45376993586 14.786 2 -1.7686791178395318 0.43480538004657954 1.0 ['ENSG00000169221|ENST00000409939|TBC1D10B'] 103951 17284 SRPRKIVDR True H1975_Epitope_Rep2 1125.6730739355698 1125.67141490379 71.774 3 -1.7687177644654128 0.43480538004657954 1.0 ['nc|ENSG00000049449|Q15293-2|RCN1'] 27080 6650 FLPPAPAA True NCI_RA007_Epitope_Rep5 782.4326754744999 782.43156993586 32.249 2 -1.7687252899883223 0.43480538004657954 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 40886 5129 HVPHEHYNQ True H1975_Epitope_Rep3 1159.51590458783 1159.51480993586 24.838 2 -1.7689759564275254 0.43480538004657954 1.0 ['ENSG00000105879|ENST00000440859|CBLL1', 'nc|ENSG00000105879|Q75N03-2|CBLL1'] 58481 26481 LEYLQVRRV True PC9_epitope_Rep1 1174.68224163694 1174.68114993586 107.47 2 -1.7691994321499238 0.434811678181413 1.0 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF', 'SFI1|p.E436Afs*118|1|0.1|ENSG00000198089|chr22:31583929-31583930|AG/-|frameshift_variant'] 112482 23825 TNRPIRREQ True PC9_epitope_Rep3 1168.6425020832799 1168.64140993586 96.929 2 -1.7694022884012361 0.4348465601390653 1.0 ['ENST00000256442.9_1_5:68462858-68462948:+|nuORF'] 71300 21654 MHCLHPGD True H1975_Epitope_Rep1 908.36329266868 908.36218993586 89.982 2 -1.7694868179176602 0.4348465601390653 1.0 ['ENSG00000173611|ENST00000336505|SCAI', 'nc|ENSG00000173611|Q8N9R8-2|SCAI'] 125525 17836 VLVTRILT True PC9_epitope_Rep4 913.5960524014899 913.59494993586 76.642 2 -1.76955752947889 0.4348640005348607 1.0 ['ENST00000556553.5_1_14:88851807-88857770:+|nuORF'] 63437 6229 LPGSPKQN True NCI_RA007_Epitope_Rep5 839.4501164437901 839.4495649679301 30.636 1 -1.769599590890074 0.4348814405419861 1.0 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113931616-113943025:+|nuORF'] 42729 14542 IFCMPTTLV True NCI_RA007_Epitope_Rep4 1023.51331094731 1023.5127749679301 63.308 1 -1.7697724522482632 0.4348828917166225 1.0 ['ENSG00000148734|ENST00000277942|NPFFR1'] 7746 2560 ASTASQRPLKG True PC9_epitope_Rep6 1114.6094706194997 1114.60836993586 14.777 2 -1.7697952474060505 0.4348828917166225 1.0 ['nc|ENSG00000234515|Q96PQ5|PPP1R2P1'] 95793 12183 SDDSSREDEH True H1975_Epitope_Rep2 1175.43268802599 1175.43158993586 51.943 2 -1.7699582055914307 0.43490178163544996 1.0 ['FBXW7|p.S668Efs*26|1|0.36|ENSG00000109670|chr4:152323003-152323004|-/C|frameshift_variant', 'ENSG00000109670|ENST00000281708|FBXW7'] 18345 9814 EIWFRFFFVVL True NCI_RA007_Epitope_Rep2 1501.81219317733 1501.81054490379 42.797 3 -1.770069924956163 0.43490178163544996 1.0 ['ENSG00000146433|ENST00000684151|TMEM181', 'nc|ENSG00000146433|Q9P2C4-1|TMEM181'] 31627 11184 GEGRGGHM True H1975_Epitope_Rep3 799.33952044899 799.3389749679301 48.117 1 -1.7701328202009723 0.43490178163544996 1.0 ['ENSG00000267221|ENST00000587304|C17orf113'] 134492 10288 WTWEDSSA True NCI_RA007_Epitope_Rep5 980.3875757568799 980.38646993586 46.202 2 -1.7703948818421238 0.43492452514900015 1.0 ['ENST00000474787.1_1_9:139974763-139976621:+|nuORF'] 40760 8763 HVARKEEQ True H1975_Epitope_Rep2 995.5148419586699 995.51374993586 38.67 2 -1.7704555462000302 0.43492452514900015 1.0 ['ENSG00000101213|ENST00000542869|PTK6', 'nc|ENSG00000101213|Q13882-2|PTK6'] 56346 10365 LDRIQFIMCP True NCI_RA007_Epitope_Rep2 1234.62023562734 1234.6191299358602 44.909 2 -1.770475074724875 0.43492452514900015 1.0 ['NBAS|p.T2353Lfs*?|1|0.21|ENSG00000151779|chr2:15167108-15167108|C/-|frameshift_variant'] 114557 12775 TSIWRLSL True NCI_RA007_Epitope_Rep4 974.5549158654999 974.55380993586 56.2 2 -1.77054833277996 0.43492452514900015 1.0 ['ENST00000369937.4_1_10:104184442-104184541:-|nuORF'] 131104 17075 VVMWRMVI True PC9_epitope_Rep6 1032.5612641992398 1032.5601699358601 78.247 2 -1.7705661717152947 0.43492452514900015 1.0 ['AGBL2|p.G622V|2|0.14|ENSG00000165923|chr11:47682019-47682019|C/A|missense_variant'] 85990 16468 QPHPIDPLLKS True NCI_RA007_Epitope_Rep3 1243.69247196747 1243.6913699358602 72.554 2 -1.7706085957961768 0.43492452514900015 1.0 ['nc|ENSG00000144712|O75155-2|CAND2', 'ENSG00000144712|ENST00000456430|CAND2'] 78256 23921 PARGRNVA True PC9_epitope_Rep2 839.47258322387 839.4720349679301 97.491 1 -1.770714311127062 0.43492452514900015 1.0 ['ENST00000406462.6_1_1:109419695-109427993:+|nuORF'] 125616 5084 VMDSFLTMMVP True NCI_RA007_Epitope_Rep3 1269.5807388841301 1269.57910490379 26.991 3 -1.7707339088876188 0.43492452514900015 1.0 ['ENSG00000125531|ENST00000370097|FNDC11'] 133579 18849 WIFFIMVFV True NCI_RA007_Epitope_Rep4 1200.64056006576 1200.63892490379 81.527 3 -1.7707715742718244 0.43492452514900015 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 38462 17373 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 73.606 2 -1.7708266615833221 0.43492452514900015 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 88681 20679 RCCCCACK True NCI_RA007_Epitope_Rep5 888.2896764295599 888.28856993586 86.499 2 -1.7709008172295895 0.43492452514900015 1.0 ['nc|nan|Q9H972-2|C14orf93', 'ENSG00000100802|ENST00000299088|C14orf93'] 32244 25363 GFIILVICFI True PC9_epitope_Rep2 1136.6667748136 1136.66566993586 103.24 2 -1.7709159245270374 0.43492452514900015 1.0 ['ENSG00000112378|ENST00000421351|PERP'] 68164 7515 LTPSSATLGQ True H1975_Epitope_Rep3 973.5080252427299 973.50692993586 33.886 2 -1.7711386702080483 0.43492452514900015 1.0 ['ENSG00000114631|ENST00000342480|PODXL2'] 128813 12176 VSRRLSSL True NCI_RA007_Epitope_Rep3 916.54541381096 916.54430993586 55.019 2 -1.771225435549502 0.43492452514900015 1.0 ['ENST00000418609.5_1_4:186508297-186508507:-|nuORF', 'nc|ENSG00000138172|Q9HA72-3|CALHM2'] 61018 20184 LLAPHMVP True PC9_epitope_Rep6 876.4891448048 876.48804993586 90.311 2 -1.7712515790281795 0.43492452514900015 1.0 ['ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000149451|Q9BZ11-3|ADAM33'] 90994 22890 RLKAGHGG True PC9_epitope_Rep2 794.4511195032999 794.45002993586 93.545 2 -1.7713033721704883 0.43492452514900015 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 31170 19672 GDEPRKVLLRL True NCI_RA007_Epitope_Rep4 1294.7721192704998 1294.77102993586 85.016 2 -1.7716872569650939 0.43497682915961144 1.0 ['ENSG00000110721|ENST00000265689|CHKA', 'nc|ENSG00000110721|P35790-2|CHKA'] 88698 14748 RCLYWASPSIP True PC9_epitope_Rep5 1291.6383282196298 1291.6372299358602 61.727 2 -1.771701250885695 0.43497682915961144 1.0 ['ENST00000597219.1_3_19:58095687-58095951:+|nuORF'] 71653 14437 MLRWKDFP True PC9_epitope_Rep2 1091.5586213469498 1091.5575299358602 60.8 2 -1.7717343723121497 0.43497682915961144 1.0 ['ENST00000525662.1_1_11:111234616-111234697:-|nuORF'] 124051 18814 VKQNRKQRE True NCI_RA007_Epitope_Rep4 1184.6738022115599 1184.67327496793 81.39 1 -1.7719484944186152 0.4349971595023002 1.0 ['nc|ENSG00000176927|A4FU69-5|EFCAB5', 'nc|ENSG00000176927|A4FU69-2|EFCAB5', 'nc|ENSG00000176927|A4FU69-4|EFCAB5', 'nc|ENSG00000176927|A4FU69-3|EFCAB5', 'ENSG00000176927|ENST00000394835|EFCAB5', 'EFCAB5|p.K736Rfs*16|1|0.7|ENSG00000176927|chr17:30055895-30055895|A/-|frameshift_variant'] 44590 16996 IPGLEAAHF True PC9_epitope_Rep5 953.49706663621 953.49596993586 70.394 2 -1.7720040887998725 0.4349971595023002 1.0 ['ENSG00000181609|ENST00000322641|OR52D1'] 95961 8819 SEAAERPQG True H1975_Epitope_Rep3 943.4359229316299 943.4353749679301 38.929 1 -1.7721074724478272 0.4349971595023002 1.0 ['ENSG00000118298|ENST00000369111|CA14', 'ENST00000607652.5_1_1:150230352-150235277:+|nuORF'] 135083 16097 YALLPREI True PC9_epitope_Rep6 973.55966689277 973.55856993586 74.253 2 -1.772134656567937 0.4349971595023002 1.0 ['nc|ENSG00000183837|Q9UL41-2|PNMA3', 'ENSG00000183837|ENST00000593810|PNMA3'] 138206 9488 YQRYLIFFF True H1975_Epitope_Rep3 1295.6702799709099 1295.66918993586 41.5 2 -1.7721842666730911 0.4349971595023002 1.0 ['ENST00000502773.5_1_4:157683422-157683533:-|nuORF'] 48131 25246 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 105.01 3 -1.7723404476985527 0.4350000556935518 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 69054 13310 LVIHRKGHR True PC9_epitope_Rep4 1114.68357904962 1114.68248993586 59.092 2 -1.7724276809310708 0.4350000556935518 1.0 ['ENSG00000083838|ENST00000594369|ZNF446', 'ENST00000391694.4_1_19:58989172-58992090:+|nuORF'] 33624 20590 GLLVVGLG True PC9_epitope_Rep3 726.4639756027799 726.4634249679301 84.465 1 -1.7725496521146715 0.4350000556935518 1.0 ['ENSG00000149489|ENST00000278833|ROM1'] 32679 24805 GHPASSWQ True H1975_Epitope_Rep1 868.38276515996 868.38166993586 102.73 2 -1.77261833651391 0.4350000556935518 1.0 ['ENSG00000204308|ENST00000375094|RNF5'] 62164 7940 LLPGPLPTPSF True H1975_Epitope_Rep1 1137.64339651673 1137.6422899358602 35.49 2 -1.7726354006480873 0.43500634899418567 1.0 ['ENST00000264554.10_1_19:416804-417233:-|nuORF'] 75107 23976 NMRDSSDI True H1975_Epitope_Rep2 936.39709489476 936.39598993586 98.745 2 -1.772744463778266 0.43501264215462415 1.0 ['ENSG00000188419|ENST00000357749|CHM'] 32206 22118 GFGFITFT True PC9_epitope_Rep6 888.43815477776 888.43704993586 98.019 2 -1.7728104993762215 0.4350189351748719 1.0 ['ENSG00000102317|ENST00000376759|RBM3', 'ENST00000466764.5_1_X:48433568-48434262:+|nuORF', 'ENST00000491240.5_1_X:48433911-48434199:+|nuORF', 'ENST00000488216.5_1_X:48433568-48434199:+|nuORF'] 83505 24333 QDIRRRERKL True PC9_epitope_Rep4 1368.8062133634396 1368.8051099358602 102.08 2 -1.7729263333344294 0.43502667542853324 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 69778 20778 LWRCQFLLPFV True H1975_Epitope_Rep2 1420.7689484663601 1420.76731490379 86.036 3 -1.7729521305457878 0.43502667542853324 1.0 ['nc|ENSG00000080822|Q9NY35-3|CLDND1', 'ENST00000508503.5_1_3:98235702-98241699:-|nuORF', 'nc|ENSG00000080822|Q9NY35-2|CLDND1', 'ENSG00000080822|ENST00000341181|CLDND1', 'ENST00000507411.5_1_3:98235680-98240280:-|nuORF'] 93440 19495 RSCRVFWIHS True NCI_RA007_Epitope_Rep4 1289.64514493557 1289.64349490379 84.251 3 -1.772973039017616 0.43502667542853324 1.0 ['ENST00000379649.5_1_13:38924005-38924193:+|nuORF', 'ENST00000494372.1_1_13:38924005-38928496:+|nuORF'] 91444 22591 RNNPEPWNKL True PC9_epitope_Rep4 1266.64691875738 1266.64528490379 95.128 3 -1.773015439454292 0.4350295699822914 1.0 ['ENST00000486007.1_1_7:10977674-10979684:-|nuORF', 'ENSG00000189043|ENST00000339600|NDUFA4'] 60201 2687 LIAMWKEGQSQ True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 14.386 3 -1.773102743402432 0.4350295699822914 1.0 ['ENST00000505451.5_1_4:25314431-25353701:+|nuORF', 'nc|ENSG00000168228|Q9H5U6-3|ZCCHC4', 'ENSG00000168228|ENST00000302874|ZCCHC4'] 104397 22767 SSHDASLH True H1975_Epitope_Rep2 852.3725943990801 852.37148993586 94.012 2 -1.7731160103625907 0.4350295699822914 1.0 ['nc|ENSG00000151718|Q6AWC2-4|WWC2', 'ENSG00000151718|ENST00000403733|WWC2', 'nc|ENSG00000151718|Q6AWC2-6|WWC2', 'nc|ENSG00000151718|Q6AWC2-5|WWC2', 'nc|ENSG00000151718|Q6AWC2-3|WWC2', 'nc|ENSG00000151718|Q6AWC2-2|WWC2'] 116164 8137 TVTGARVM True PC9_epitope_Rep5 833.4429228883699 833.44182993586 36.239 2 -1.7731840733375432 0.4350295699822914 1.0 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'ENST00000366131.6_1_12:6462937-6464599:-|nuORF'] 99848 11723 SLHCAEDD True NCI_RA007_Epitope_Rep5 888.3283466285999 888.32724993586 51.746 2 -1.7734064823097293 0.4350484463748747 1.0 ['nc|ENSG00000123444|Q9NVX7-1|KBTBD4', 'ENSG00000123444|ENST00000430070|KBTBD4', 'nc|ENSG00000123444|Q9NVX7-3|KBTBD4'] 26602 7134 FKHLRWWWLSF True H1975_Epitope_Rep1 1604.8404736138398 1604.8388249037903 32.465 3 -1.7734127680484675 0.4350484463748747 1.0 ['ENST00000575955.1_1_17:4120189-4167236:-|nuORF'] 92136 25006 RQAMKKVL True PC9_epitope_Rep3 972.5902558283999 972.58914993586 101.53 2 -1.7734481710892662 0.4350484463748747 1.0 ['nc|ENSG00000138346|P51530-3|DNA2', 'nc|ENSG00000138346|P51530-4|DNA2', 'ENSG00000138346|ENST00000358410|DNA2', 'nc|ENSG00000138346|P51530-2|DNA2', 'DNA2|p.S779Hfs*6|1|0.35|ENSG00000138346|chr10:68422764-68422764|A/-|frameshift_variant'] 85895 20884 QNLPLLLLDLT True NCI_RA007_Epitope_Rep5 1251.74383883399 1251.74274993586 87.326 2 -1.7738049843479635 0.43508814914635097 1.0 ['ENSG00000198786|ENST00000361567|MT-ND5'] 98244 9097 SIEPKKTK True PC9_epitope_Rep3 929.55458151233 929.55348993586 39.931 2 -1.7739382922085387 0.4351055773342837 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ENST00000555263.1_1_14:96755932-96756910:-|nuORF'] 15705 8987 EDAERREREER True H1975_Epitope_Rep1 1473.6920310264902 1473.6909299358601 39.474 2 -1.774048352640153 0.43511186840845056 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 83492 10800 QDGQPLLKV True H1975_Epitope_Rep3 996.5603951687599 996.55928993586 46.621 2 -1.7740820433761906 0.43511331365888967 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 22486 9134 ETIAHFHF True H1975_Epitope_Rep1 1000.4766655447999 1000.47556993586 40.04 2 -1.774161280437509 0.43511331365888967 1.0 ['FAT3|p.A4199Pfs*65|2|0.39|ENSG00000165323|chr11:92883049-92883049|C/-|frameshift_variant', 'FAT3|p.P4361Qfs*8|1|0.17|ENSG00000165323|chr11:92890520-92890520|C/-|frameshift_variant', 'nc|ENSG00000165323|Q8TDW7|FAT3', 'ENSG00000165323|ENST00000525166|FAT3'] 37857 22531 HDRRPLLH True PC9_epitope_Rep6 1042.57844527474 1042.5773499358602 99.677 2 -1.7743082859394648 0.4351258950744457 1.0 ['ENST00000231706.5_1_3:170204113-170216543:-|nuORF'] 18202 20451 EIRAIRQARAR True H1975_Epitope_Rep1 1338.79564867974 1338.79454993586 85.06 2 -1.774320199103166 0.4351258950744457 1.0 ['nc|ENSG00000128284|O95236-3|APOL3', 'ENSG00000128284|ENST00000424878|APOL3', 'nc|ENSG00000128284|O95236|APOL3'] 37285 11131 GVVPLTACRIY True PC9_epitope_Rep5 1190.6481646273398 1190.6465249037901 47.8 3 -1.7743510609431654 0.4351273399481063 1.0 ['ENSG00000145495|ENST00000274140|MARCHF6', 'ENST00000511802.5_1_5:10353827-10401026:+|nuORF', 'MARCHF6|p.G171Efs*88|1|0.32|ENSG00000145495|chr5:10390432-10390432|G/-|frameshift_variant'] 64748 19715 LRRLYRRQERH True NCI_RA007_Epitope_Rep1 1581.90765874021 1581.90656993586 80.875 2 -1.774351662195266 0.4351273399481063 1.0 ['ENSG00000185955|ENST00000332375|SPACDR'] 38858 20636 HIGHTGHM True NCI_RA007_Epitope_Rep4 888.4024550587201 888.40134993586 89.381 2 -1.7744090354401978 0.4351336302895323 1.0 ['ABCC4|p.D1304G|1|0.41|ENSG00000125257|chr13:95021642-95021642|T/C|missense_variant'] 55104 10378 LALPWPMPLE True PC9_epitope_Rep5 1165.6205528971698 1165.61944993586 44.903 2 -1.7744668863143025 0.43513992049086314 1.0 ['ENST00000560821.1_1_15:91352032-91358506:+|nuORF'] 13863 16406 DRCERGQVLK True H1975_Epitope_Rep3 1202.6189897573797 1202.6184749679298 68.581 1 -1.7747583026185003 0.43516209476309226 1.0 ['ENST00000537496.5_1_12:109994935-109999279:-|nuORF', 'ENST00000541763.6_1_12:109994935-109999613:-|nuORF', 'ENST00000540016.5_1_12:109994935-110011292:-|nuORF'] 117761 25594 VALKPLGGL True PC9_epitope_Rep3 866.5589386167799 866.5583949679301 103.94 1 -1.7748771956982388 0.43516209476309226 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 37508 17344 GYHGDIFE True NCI_RA007_Epitope_Rep5 936.39774651776 936.39664993586 73.49 2 -1.7750014783072385 0.43516209476309226 1.0 ['ENSG00000203737|ENST00000367685|GPR52'] 44314 21906 ILYRTLERRRL True PC9_epitope_Rep6 1487.9048647755499 1487.90320490379 97.164 3 -1.7750217652420768 0.43516209476309226 1.0 ['nc|ENSG00000129680|Q8IWC1-2|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-3|MAP7D3', 'nc|ENSG00000129680|Q8IWC1-4|MAP7D3', 'ENSG00000129680|ENST00000316077|MAP7D3', 'MAP7D3|p.Q308Rfs*2|1|0.43|ENSG00000129680|chrX:136232035-136232035|G/-|frameshift_variant'] 133320 25201 WERFRLSRRR True PC9_epitope_Rep2 1460.8225321339198 1460.82088490379 102.6 3 -1.7750459542589605 0.43516209476309226 1.0 ['ENSG00000225968|ENST00000424383|ELFN1'] 121263 10454 VGGVGGCP True PC9_epitope_Rep1 644.29519602552 644.29464496793 45.098 1 -1.7750837807261814 0.43516209476309226 1.0 ['ENST00000494815.1_1_11:864058-865677:+|nuORF'] 63273 23358 LPAPKRRHT True PC9_epitope_Rep2 1074.6410455312998 1074.6399499358602 95.321 2 -1.7752062161074147 0.43516209476309226 1.0 ['BAZ2A|p.F1497Pfs*10|1|0.26|ENSG00000076108|chr12:56600773-56600800|GGGACCAGCTCATAATCCCTTCTTGAAA/-|frameshift_variant'] 110544 9848 TIRLIYFKNKM True NCI_RA007_Epitope_Rep1 1425.8166269347696 1425.81552993586 42.308 2 -1.775301733506708 0.43516209476309226 1.0 ['nc|ENSG00000143776|Q5VT25-3|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-4|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-5|CDC42BPA', 'nc|ENSG00000143776|Q5VT25|CDC42BPA', 'ENSG00000143776|ENST00000366766|CDC42BPA', 'nc|ENSG00000143776|Q5VT25-6|CDC42BPA'] 93479 22827 RSGTGHGD True PC9_epitope_Rep5 785.34162862397 785.3410849679301 92.8 1 -1.7753973154615756 0.43516209476309226 1.0 ['ENST00000413052.6_1_1:113217551-113217650:+|nuORF'] 128507 8523 VSGCVHPP True PC9_epitope_Rep4 794.37450897538 794.37340993586 40.26 2 -1.7756534925974725 0.43516209476309226 1.0 ['ENST00000593726.5_1_19:41305451-41305802:+|nuORF'] 110886 12482 TLAGAQSHG True NCI_RA007_Epitope_Rep2 840.4089799078001 840.40843496793 53.163 1 -1.7756614050866735 0.43516209476309226 1.0 ['ENSG00000162992|ENST00000295108|NEUROD1'] 59491 4749 LGPGTEDAVR True H1975_Epitope_Rep3 1013.5141732523299 1013.51306993586 23.393 2 -1.7757290111792374 0.43516209476309226 1.0 ['ENST00000357520.8_1_7:93633524-93633626:-|nuORF'] 29137 8782 FTTNMLESKS True H1975_Epitope_Rep1 1156.5434247752798 1156.5423299358602 38.708 2 -1.7758143394087689 0.43516209476309226 1.0 ['nc|ENSG00000122550|Q8IXQ5-5|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-2|KLHL7', 'ENSG00000122550|ENST00000339077|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-4|KLHL7', 'nc|ENSG00000122550|Q8IXQ5-3|KLHL7'] 29999 6518 FYGPGPPA True PC9_epitope_Rep4 804.3806399016398 804.37954993586 32.194 2 -1.7758209648122987 0.43516209476309226 1.0 ['ENSG00000178951|ENST00000322357|ZBTB7A'] 19446 10067 ELPSASRL True PC9_epitope_Rep4 871.47633119163 871.4752299358599 46.39 2 -1.7758273076340403 0.43516209476309226 1.0 ['ENST00000345133.9_1_18:3451670-3451733:+|nuORF'] 32308 21234 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 88.717 2 -1.7758525025903227 0.43516209476309226 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 3086 23414 AGAHALYL True PC9_epitope_Rep4 814.4337381036601 814.43264993586 98.345 2 -1.775858591094063 0.43516209476309226 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 106609 13831 SWHLVHDK True H1975_Epitope_Rep1 1020.51411368268 1020.51357496793 58.348 1 -1.7758973664223099 0.43516209476309226 1.0 ['ENST00000450091.1_1_10:107445275-107445446:-|nuORF'] 90082 21172 RGPQAHLV True PC9_epitope_Rep6 876.49298431528 876.49188993586 94.284 2 -1.7759464430403964 0.43516209476309226 1.0 ['ENSG00000163286|ENST00000295453|ALPG', 'ENSG00000163283|ENST00000392027|ALPP', 'ENSG00000163295|ENST00000295463|ALPI'] 112453 22708 TNPTAKRQFVQ True PC9_epitope_Rep4 1288.68878356936 1288.68712490379 95.572 3 -1.7759822521642528 0.43516209476309226 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 5972 18007 APKRARPPR True NCI_RA007_Epitope_Rep4 1047.6413798844699 1047.6402899358602 77.911 2 -1.7759948761800777 0.43516209476309226 1.0 ['ENST00000457594.2_7:74237150-74267816:-|nuORF'] 129681 19172 VTILLMEI True H1975_Epitope_Rep2 930.54599097458 930.5448899358599 79.576 2 -1.7760061948315666 0.43516209476309226 1.0 ['ENST00000570910.1_1_17:79649904-79650744:-|nuORF'] 92057 7340 RPRTRPMRRR True NCI_RA007_Epitope_Rep4 1380.8109219043997 1380.80926490379 34.871 3 -1.776063141435338 0.43516209476309226 1.0 ['ENST00000258341.4_1_1:183105646-183106870:+|nuORF'] 67792 8175 LTHPSGEVW True H1975_Epitope_Rep1 1024.4977949121999 1024.49668993586 36.385 2 -1.7761517527931847 0.43517467103065927 1.0 ['ENST00000460627.5_1_3:184100167-184100350:+|nuORF', 'nc|ENSG00000090539|Q9H2X0-4|CHRD', 'ENST00000470150.5_1_3:184098136-184100834:+|nuORF', 'nc|ENSG00000090539|Q9H2X0-5|CHRD', 'ENSG00000090539|ENST00000204604|CHRD'] 62450 15927 LLSKKLIYFQL True NCI_RA007_Epitope_Rep5 1364.84315895244 1364.84206993586 67.99 2 -1.77616821223351 0.43517467103065927 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 94273 8715 RWSFSVVW True H1975_Epitope_Rep3 1065.5396001545298 1065.53850993586 38.523 2 -1.776317587462485 0.43521435648524387 1.0 ['ENST00000265801.6_2_8:20105580-20105898:-|nuORF'] 55858 6263 LDFGTWTSM True NCI_RA007_Epitope_Rep1 1056.45863252216 1056.45752993586 28.392 2 -1.7765150837674697 0.4352186835572674 1.0 ['nc|ENSG00000108061|Q9UQ13-2|SHOC2', 'ENSG00000108061|ENST00000369452|SHOC2'] 70707 21415 MDPGCLVC True H1975_Epitope_Rep1 836.32306764948 836.32196993586 88.974 2 -1.7765340381876589 0.4352186835572674 1.0 ['ENST00000600659.2_1_19:8387846-8388053:+|nuORF'] 38990 19630 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 82.416 3 -1.7765661256418521 0.4352186835572674 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 3818 16981 AGVRFRARR True NCI_RA007_Epitope_Rep4 1087.64752789407 1087.6464299358602 73.595 2 -1.7766123831912304 0.4352186835572674 1.0 ['ENST00000599519.1_1_19:7542090-7548186:-|nuORF'] 107354 18632 SYSAVMPRMV True PC9_epitope_Rep2 1139.54673633391 1139.54562993586 77.033 2 -1.776630266669217 0.4352186835572674 1.0 ['ENSG00000161850|ENST00000257974|KRT82', 'CON__Q9NSB4'] 15600 11870 EATVILAI True NCI_RA007_Epitope_Rep4 828.4956696538799 828.49456993586 52.651 2 -1.7766890389810601 0.4352186835572674 1.0 ['ENST00000441603.1_1_11:5592613-5592883:-|nuORF'] 43849 23666 ILCILGHRQT True H1975_Epitope_Rep2 1152.6437479532399 1152.64210490379 97.526 3 -1.7769207855578961 0.4352312573050593 1.0 ['ENST00000581724.1_1_18:10726700-10726934:+|nuORF'] 94090 16121 RVWLQPRPL True PC9_epitope_Rep5 1163.6927467509897 1163.69110490379 67.0 3 -1.777011541471523 0.4352312573050593 1.0 ['ENST00000463471.6_1_1:2491166-2493466:+|nuORF', 'ENST00000496064.5_1_1:2491286-2492222:+|nuORF'] 90176 24154 RHFRRGRRR True PC9_epitope_Rep5 1295.7660203173098 1295.7649299358602 97.894 2 -1.7772074861620184 0.43524042742653607 1.0 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 80009 12134 PKGEESVAAR True NCI_RA007_Epitope_Rep1 1042.54072235334 1042.5396299358601 51.18 2 -1.7772839161029057 0.43524042742653607 1.0 ['ENST00000559109.2_1_15:31745531-31745762:-|nuORF'] 123280 22720 VHSAVLHP True H1975_Epitope_Rep2 858.47118624154 858.47008993586 93.832 2 -1.7772931529106655 0.43524042742653607 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 108999 24574 TEVLKVINAT True PC9_epitope_Rep4 1086.62847472858 1086.62736993586 103.01 2 -1.7773015762937896 0.43524042742653607 1.0 ['nc|ENSG00000170011|Q8NFW9-4|MYRIP', 'nc|ENSG00000170011|Q8NFW9-3|MYRIP', 'nc|ENSG00000170011|Q8NFW9-6|MYRIP', 'ENSG00000170011|ENST00000302541|MYRIP'] 79235 12782 PGGGKRKG True PC9_epitope_Rep5 755.4402204664299 755.43912993586 54.177 2 -1.7773161065055105 0.43524042742653607 1.0 ['ENSG00000066654|ENST00000396083|THUMPD1', 'ENST00000569768.1_1_16:20750201-20753061:-|nuORF'] 52572 25715 KPVQGGGL True PC9_epitope_Rep1 754.4337381036598 754.43264993586 103.96 2 -1.7773256440300484 0.43524186905901474 1.0 ['NCOA1|p.L960P|1|0.2|ENSG00000084676|chr2:24728469-24728469|T/C|missense_variant'] 104707 14119 STCVLEFEM True PC9_epitope_Rep1 1057.4460192331298 1057.44492993586 59.136 2 -1.7773497187228513 0.43524186905901474 1.0 ['PCDHGB3|p.L668Ffs*7|1|0.34|ENSG00000262209|chr5:141372395-141372396|-/T|frameshift_variant', 'nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3', 'ENSG00000262209|ENST00000576222|PCDHGB3'] 121442 24709 VGIIGGGH True PC9_epitope_Rep1 708.39187329168 708.39132496793 99.931 1 -1.777383822897447 0.435248155115034 1.0 ['nc|ENSG00000165555|Q6NXP6-2|NOXRED1', 'ENSG00000165555|ENST00000380835|NOXRED1'] 55586 7461 LCLLLLWWRRR True NCI_RA007_Epitope_Rep5 1526.9020283245798 1526.9009299358602 35.378 2 -1.777730287119749 0.4352544410311206 1.0 ['ENSG00000121716|ENST00000609309|PILRB'] 65557 6021 LSGEPLRTN True H1975_Epitope_Rep3 985.5192586327701 985.51816993586 28.172 2 -1.7779022776936357 0.43525484086356553 1.0 ['ENSG00000164512|ENST00000341048|ANKRD55', 'nc|ENSG00000164512|Q3KP44-3|ANKRD55', 'nc|ENSG00000164512|Q3KP44-2|ANKRD55'] 110295 16058 TIHDRKEF True PC9_epitope_Rep1 1044.53524305008 1044.5341499358601 66.581 2 -1.7782339571985515 0.43525484086356553 1.0 ['nc|ENSG00000259207|P05106-2|ITGB3', 'nc|ENSG00000259207|P05106-3|ITGB3', 'ENSG00000259207|ENST00000559488|ITGB3'] 62712 2851 LLYCWEMFWIV True NCI_RA007_Epitope_Rep2 1501.71380165901 1501.71214490379 15.462 3 -1.7782536496129664 0.43525484086356553 1.0 ['ENST00000578529.5_1_18:259269-260310:-|nuORF', 'ENST00000581116.1_1_18:259269-264031:-|nuORF'] 126322 19999 VPKDPKPQWRR True PC9_epitope_Rep5 1405.79425169741 1405.79260490379 81.98 3 -1.778254197262922 0.43525484086356553 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 62868 12479 LMPWLILEL True PC9_epitope_Rep4 1126.64603936902 1126.64440490379 55.808 3 -1.7783414148299312 0.43525484086356553 1.0 ['ENST00000256689.9_1_12:46761121-46764364:-|nuORF'] 29994 19085 FYFWEAALL True NCI_RA007_Epitope_Rep3 1158.5749826037397 1158.57334490379 83.366 3 -1.7783786105022985 0.43525484086356553 1.0 ['GLRA3|p.S12L|1|0.27|ENSG00000145451|chr4:174828777-174828777|G/A|missense_variant', 'nc|ENSG00000145451|O75311-2|GLRA3', 'ENSG00000145451|ENST00000274093|GLRA3'] 72018 4271 MQKEEYWRRR True PC9_epitope_Rep5 1480.7357508451198 1480.73410490379 21.497 3 -1.7784318329217708 0.43525484086356553 1.0 ['ENSG00000056097|ENST00000265069|ZFR'] 137627 14599 YLVRVDEKHRR True H1975_Epitope_Rep1 1469.82152907441 1469.8204299358601 61.363 2 -1.7785324374315208 0.43525484086356553 1.0 ['ENSG00000112972|ENST00000325110|HMGCS1'] 15713 9152 EDAERREREER True NCI_RA007_Epitope_Rep2 1473.6920310264902 1473.6909299358601 40.206 2 -1.7785555572058824 0.43525484086356553 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 49264 15012 KHDVAHMIV True PC9_epitope_Rep6 1048.54878493924 1048.54768993586 69.77 2 -1.7785643156079605 0.43525484086356553 1.0 ['ENST00000550735.6_1_12:112337947-112339324:+|nuORF'] 116313 23409 TVWGREKAY True PC9_epitope_Rep1 1108.5665431783598 1108.5654499358602 94.827 2 -1.7785789113043786 0.43525484086356553 1.0 ['ENST00000360635.7_1_2:9547636-9547675:-|nuORF'] 57353 21283 LEHFRLFFV True PC9_epitope_Rep6 1206.65496425994 1206.65332490379 94.717 3 -1.778609534936945 0.43525484086356553 1.0 ['ENSG00000203499|ENST00000527139|IQANK1'] 69603 2235 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 11.558 3 -1.7786446226069166 0.43525484086356553 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 120478 23336 VFVLPFPV True PC9_epitope_Rep3 916.5422259234799 916.54112993586 95.042 2 -1.7786617513843006 0.43525484086356553 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 85241 25705 QKKLKKKKKK True NCI_RA007_Epitope_Rep4 1283.9129102781096 1283.91127490379 112.22 3 -1.7787730819052272 0.43525484086356553 1.0 ['ENST00000378026.4_3_12:106631761-106631812:-|nuORF'] 92189 13416 RQGGGGGG True PC9_epitope_Rep5 644.2990355359999 644.2984849679301 56.621 1 -1.7787913316361876 0.43525484086356553 1.0 ['ENST00000502492.5_2_17:47007783-47007840:-|nuORF'] 137288 26628 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 108.97 1 -1.779323159495443 0.43533561826760436 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 95664 5720 SAVSSYRGPE True NCI_RA007_Epitope_Rep4 1051.4934378077498 1051.4923499358601 28.616 2 -1.779412871688065 0.43533561826760436 1.0 ['ENST00000470238.1_1_1:169838129-169857981:-|nuORF'] 45177 21450 IREEVRHWRPR True NCI_RA007_Epitope_Rep1 1532.8436615013197 1532.8425699358602 87.767 2 -1.779484008579634 0.43533561826760436 1.0 ['ENST00000469506.3_1_3:42201841-42226383:+|nuORF'] 29554 25963 FVIFMFFLN True PC9_epitope_Rep3 1176.6041745570399 1176.60253490379 105.67 3 -1.7795218151936942 0.43533561826760436 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 10724 21124 CVGMGMLA True NCI_RA007_Epitope_Rep3 780.33323841036 780.33214993586 91.875 2 -1.779592786444218 0.43533705739656825 1.0 ['ENST00000497497.1_1_10:119013719-119036774:+|nuORF'] 25681 17649 FFFFFFFLPFW True NCI_RA007_Epitope_Rep1 1590.7740167634597 1590.77290993586 72.786 2 -1.7796152518389265 0.43533705739656825 1.0 ['ENST00000597450.1_1_2:136757602-136764807:+|nuORF'] 137284 26268 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 107.2 1 -1.7796935981261155 0.4353374424245121 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 52269 24497 KNQRRVGLTHV True PC9_epitope_Rep4 1306.7582005418599 1306.7571099358602 102.71 2 -1.7797271340246286 0.4353374424245121 1.0 ['ENST00000261396.5_1_1:229577072-229577156:-|nuORF'] 135867 2627 YERKGLGFSP True NCI_RA007_Epitope_Rep5 1152.5927579261997 1152.5916699358602 14.792 2 -1.7797704406410118 0.4353374424245121 1.0 ['chr7:50504059-50513259|115|12.32|0.0|20.23|-|1|TE_info:L1PB1,L1PB1_dup5738,L1,LINE,donor,+,50513259,50517927|DDC,None|81'] 48122 28625 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 119.98 3 -1.7798032783250994 0.4353374424245121 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 127811 25532 VRLGLALV True PC9_epitope_Rep2 839.5592729699499 839.5587249679301 103.89 1 -1.7798067298904876 0.4353374424245121 1.0 ['ENST00000331872.10_1_1:182353105-182353156:-|nuORF'] 38991 22899 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 95.302 3 -1.7798103903198534 0.4353374424245121 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 130914 22395 VVHSVLVM True PC9_epitope_Rep4 882.4997094885 882.49860993586 94.376 2 -1.7798753311245545 0.4353374424245121 1.0 ['ENST00000569839.1_1_16:57608733-57625590:+|nuORF', 'ENSG00000159618|ENST00000349457|ADGRG5'] 71454 25399 MKAKKIMK True PC9_epitope_Rep2 976.5925643275199 976.59201496793 103.38 1 -1.7798758957760117 0.4353374424245121 1.0 ['nc|ENSG00000140598|Q7Z2Z2-2|EFL1', 'ENSG00000140598|ENST00000268206|EFL1', 'EFTUD1-KHDRBS2|2|fusion', 'EFTUD1-KHDRBS2|1|fusion'] 31254 8966 GDQGWILM True PC9_epitope_Rep5 918.4269384710599 918.4263849679301 39.431 1 -1.7799615509585132 0.4353374424245121 1.0 ['ENST00000358595.9_2_1:150825241-150830924:-|nuORF'] 61628 24557 LLHATLTT True H1975_Epitope_Rep1 868.5018176634801 868.50072993586 101.76 2 -1.7799735595827282 0.4353374424245121 1.0 ['ENST00000541199.5_3_6:142623767-142688843:+|nuORF', 'ENST00000435011.6_3_6:142623767-142688843:+|nuORF'] 137282 25974 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 105.73 1 -1.7800012505481995 0.4353374424245121 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 134205 5189 WRPRFRYYHWA True H1975_Epitope_Rep3 1636.81638412432 1636.8147449037901 25.055 3 -1.7800037071509964 0.4353374424245121 1.0 ['nc|ENSG00000140199|Q9UHW9-6|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-5|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-2|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-3|SLC12A6', 'nc|ENSG00000140199|Q9UHW9-4|SLC12A6', 'ENSG00000140199|ENST00000354181|SLC12A6', 'ENST00000560023.1_1_15:34533432-34537514:-|nuORF'] 89089 18531 REETKKKI True H1975_Epitope_Rep2 1030.6134933707797 1030.6123899358602 76.902 2 -1.7800245238415913 0.4353374424245121 1.0 ['nc|ENSG00000167257|Q8ND24-2|RNF214', 'ENSG00000167257|ENST00000300650|RNF214'] 118284 14199 VDALFPSV True H1975_Epitope_Rep2 846.44871946146 846.44762993586 59.767 2 -1.7800853283643405 0.4353374424245121 1.0 ['SLC45A1|p.G11V|1|0.28|ENSG00000162426|chr1:8324361-8324361|G/T|missense_variant'] 137819 26323 YPEYLSNFP True PC9_epitope_Rep5 1128.51277627 1128.51112490379 107.09 3 -1.7801585207493644 0.4353374424245121 1.0 ['ENSG00000198301|ENST00000356260|SDAD1', 'ENST00000395710.5_1_4:76871905-76902632:-|nuORF'] 129528 16598 VTFTKRKF True PC9_epitope_Rep4 1025.6022004110898 1025.6011099358602 71.819 2 -1.7801771694095667 0.4353374424245121 1.0 ['ENSG00000116604|ENST00000348159|MEF2D', 'nc|ENSG00000116604|Q14814-2|MEF2D', 'nc|ENSG00000116604|Q14814-4|MEF2D', 'nc|ENSG00000116604|Q14814-5|MEF2D', 'nc|ENSG00000116604|Q14814-6|MEF2D', 'nc|ENSG00000116604|Q14814-3|MEF2D', 'nc|ENSG00000068305|Q02078-6|MEF2A', 'nc|ENSG00000068305|Q02078|MEF2A', 'ENSG00000068305|ENST00000557942|MEF2A', 'nc|ENSG00000068305|Q02078-5|MEF2A', 'nc|ENSG00000068305|Q02078-3|MEF2A', 'ENST00000559036.5_1_15:100173318-100185981:+|nuORF', 'ENST00000558983.5_1_15:100173318-100211695:+|nuORF', 'nc|ENSG00000081189|Q06413-5|MEF2C', 'ENSG00000081189|ENST00000504921|MEF2C', 'nc|ENSG00000081189|Q06413-2|MEF2C', 'nc|ENSG00000081189|Q06413-6|MEF2C', 'nc|ENSG00000081189|Q06413-3|MEF2C', 'nc|ENSG00000081189|Q06413-4|MEF2C', 'nc|ENSG00000068305|Q02078-4|MEF2A', 'nc|ENSG00000213999|Q02080|MEF2B', 'ENSG00000213999|ENST00000424583|MEF2B'] 120402 15738 VFSPDGSY True PC9_epitope_Rep2 870.37594844402 870.3753949679301 65.807 1 -1.7802776449669229 0.4353455467681116 1.0 ['DGKD-ATG16L1|2|fusion', 'nc|ENSG00000085978|Q676U5-4|ATG16L1', 'nc|ENSG00000085978|Q676U5-5|ATG16L1', 'nc|ENSG00000085978|Q676U5-2|ATG16L1', 'ENSG00000085978|ENST00000392017|ATG16L1'] 9286 13205 AVRTFVSH True H1975_Epitope_Rep1 915.4926499621099 915.49154993586 55.889 2 -1.7803952056800714 0.4353455467681116 1.0 ['ENST00000591478.1_1_16:5080487-5083590:-|nuORF', 'nc|ENSG00000103174|Q9UK23-3|NAGPA', 'ENST00000568202.5_1_16:5075546-5083878:-|nuORF', 'nc|ENSG00000103174|Q9UK23-2|NAGPA', 'ENSG00000103174|ENST00000312251|NAGPA'] 8534 6462 ATWPFWSR True NCI_RA007_Epitope_Rep4 1049.50830002625 1049.5072099358601 31.455 2 -1.7804891716415612 0.4353455467681116 1.0 ['ENST00000456170.5_1_1:44686783-44687191:-|nuORF'] 137279 25405 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 103.15 1 -1.7805412119420607 0.4353455467681116 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 137262 25118 YLGKAKPL True NCI_RA007_Epitope_Rep1 888.5432885526399 888.54274496793 103.95 1 -1.7806614155476863 0.4353455467681116 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 4473 4684 AKGFTPIP True PC9_epitope_Rep1 829.4697892592098 829.46868993586 22.889 2 -1.7806972252621842 0.4353455467681116 1.0 ['ENSG00000046604|ENST00000261590|DSG2'] 62911 16831 LMVPLLKF True NCI_RA007_Epitope_Rep3 959.58779621691 959.58668993586 74.075 2 -1.7807207897910013 0.4353455467681116 1.0 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENST00000545710.1_1_12:9659830-9660388:-|nuORF', 'ENSG00000137040|ENST00000259569|RANBP6'] 137273 26553 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 107.83 1 -1.7808172225527337 0.4353455467681116 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 137272 26480 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 107.46 1 -1.7808946588766597 0.4353455467681116 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 91201 7317 RLRAETEQG True NCI_RA007_Epitope_Rep1 1058.54687036294 1058.54576993586 32.454 2 -1.7809349892282749 0.4353455467681116 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 137271 26379 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 106.99 1 -1.7809930239367817 0.4353455467681116 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 2967 21761 AFIIFWVRSKR True PC9_epitope_Rep6 1421.82957457697 1421.82846993586 96.596 2 -1.781080152847487 0.4353455467681116 1.0 ['nc|ENSG00000178562|P10747-2|CD28', 'nc|ENSG00000178562|P10747-4|CD28', 'nc|ENSG00000178562|P10747-3|CD28', 'ENSG00000178562|ENST00000324106|CD28', 'nc|ENSG00000178562|P10747-7|CD28'] 137259 24905 YLGKAKPL True H1975_Epitope_Rep3 888.5432885526399 888.54274496793 103.6 1 -1.7811208716270248 0.4353455467681116 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 92152 18191 RQARDERTF True PC9_epitope_Rep1 1177.59521753769 1177.59358490379 74.761 3 -1.7811494250040474 0.4353455467681116 1.0 ['RAB40C-MYH11|1|fusion', 'RAB40C-MYH11|3|fusion', 'RAB40C-MYH11|2|fusion', 'nc|ENSG00000133392|P35749-4|MYH11', 'RAB40C-MYH11|4|fusion', 'nc|ENSG00000133392|P35749-3|MYH11', 'ENSG00000133392|ENST00000300036|MYH11', 'nc|ENSG00000133392|P35749-2|MYH11'] 27053 14356 FLNWFDERAWY True NCI_RA007_Epitope_Rep1 1545.70409928033 1545.70300993586 59.882 2 -1.7811713694481384 0.4353455467681116 1.0 ['ENSG00000163527|ENST00000295770|STT3B', 'ENST00000423527.5_1_3:31574490-31661461:+|nuORF', 'ENST00000453168.5_1_3:31574490-31661308:+|nuORF'] 71182 12666 MFHMPCIQKWA True PC9_epitope_Rep2 1390.6348401456598 1390.6337499358601 54.026 2 -1.7811984668663021 0.4353455467681116 1.0 ['NFXL1|p.I182M|1|0.17|ENSG00000170448|chr4:47903294-47903294|T/C|missense_variant'] 137269 26155 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 105.92 1 -1.781216961414081 0.4353455467681116 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 137268 26081 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 105.57 1 -1.7812902119907674 0.4353455467681116 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 52043 23427 KLHKEKTRKE True PC9_epitope_Rep4 1295.7673682432298 1295.76571490379 98.398 3 -1.7812933889971745 0.4353455467681116 1.0 ['ENSG00000167258|ENST00000447079|CDK12', 'nc|ENSG00000167258|Q9NYV4-2|CDK12', 'nc|ENSG00000167258|Q9NYV4-3|CDK12'] 37105 18602 GVSQYMIP True PC9_epitope_Rep1 893.4316894983299 893.4311449679301 76.341 1 -1.7813855475273723 0.4353469850839238 1.0 ['CMYA5|p.E728Q|1|0.2|ENSG00000164309|chr5:79730947-79730947|G/C|missense_variant'] 92200 19054 RQGRPVIVVID True NCI_RA007_Epitope_Rep3 1250.7459045226599 1250.74426490379 83.243 3 -1.781409654183911 0.4353469850839238 1.0 ['ENST00000244745.3_2_6:21596320-21596539:+|nuORF'] 86130 22543 QPRGRGQRGA True PC9_epitope_Rep6 1081.58532156033 1081.58422993586 99.725 2 -1.7814581404977337 0.4353484233357433 1.0 ['ENST00000471909.1_1_21:45217249-45223652:+|nuORF', 'ENST00000467112.5_1_21:45213150-45223652:+|nuORF', 'ENSG00000160214|ENST00000497547|RRP1'] 23697 24342 EYHTRWYFKYF True PC9_epitope_Rep5 1638.76194850962 1638.76084993586 98.666 2 -1.7815258977070696 0.4353484233357433 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'nc|ENSG00000136895|Q5VVW2-3|GARNL3'] 69790 955 LWRMLKEEDA True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 5.1845 3 -1.7817077071447611 0.4353547038017485 1.0 ['ENST00000541110.5_2_6:42330765-42418997:-|nuORF'] 124393 16201 VLEEEFRWLLH True PC9_epitope_Rep2 1469.76669953689 1469.76560993586 67.567 2 -1.7818201727899274 0.4353778568648168 1.0 ['ENST00000585871.1_1_16:4851502-4852800:-|nuORF', 'ENSG00000067836|ENST00000322048|ROGDI'] 46084 12862 ISYPRYIEIM True NCI_RA007_Epitope_Rep2 1283.65839495787 1283.65728993586 54.649 2 -1.7818519750993627 0.4353778568648168 1.0 ['nc|ENSG00000173157|P59510-2|ADAMTS20', 'nc|ENSG00000173157|P59510|ADAMTS20', 'ENSG00000173157|ENST00000389420|ADAMTS20'] 48132 25327 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 105.35 3 -1.7818712431236448 0.4353778568648168 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 10365 19532 CITPKRRLTR True NCI_RA007_Epitope_Rep5 1242.7342942931398 1242.73264490379 82.017 3 -1.7818897557397126 0.4353778568648168 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 37021 18650 GVRYQIQP True PC9_epitope_Rep6 959.5188647099499 959.5183149679301 84.381 1 -1.7819746974701316 0.4353778568648168 1.0 ['ENST00000593256.6_2_19:11456822-11456954:-|nuORF'] 43870 16491 ILDEQGRTV True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 68.432 2 -1.7819998174060518 0.4353778568648168 1.0 ['ENSG00000117360|ENST00000324862|PRPF3', 'PRPF3|p.P255S|1|0.3|ENSG00000117360|chr1:150334969-150334969|C/T|missense_variant', 'nc|ENSG00000117360|O43395-3|PRPF3', 'ENST00000467329.5_1_1:150300781-150316915:+|nuORF'] 33162 16337 GKSKAALP True PC9_epitope_Rep3 770.46503823194 770.46394993586 67.974 2 -1.7820401935081094 0.4353778568648168 1.0 ['ENSG00000102580|ENST00000602402|DNAJC3'] 122768 6693 VGVGIDWA True H1975_Epitope_Rep3 815.4177536863499 815.41664993586 30.699 2 -1.7820789848134155 0.4353778568648168 1.0 ['ENST00000460254.1_1_22:47131346-47133979:-|nuORF'] 71964 5810 MPWFFLWHLKK True NCI_RA007_Epitope_Rep5 1531.8162330119496 1531.81401987172 29.033 4 -1.782115647484202 0.4353778568648168 1.0 ['ENST00000342922.8_1_11:47290950-47291097:+|nuORF'] 57222 12063 LEEYRLLL True NCI_RA007_Epitope_Rep1 1047.59644632431 1047.5953499358602 50.91 2 -1.7822531616392556 0.43538073154728146 1.0 ['ENSG00000107201|ENST00000379883|RIGI', 'nc|ENSG00000107201|O95786-2|RIGI', 'ENST00000379868.5_1_9:32491415-32526182:-|nuORF'] 41477 6872 IAYYMITGPWR True PC9_epitope_Rep5 1369.68527841205 1369.68364490379 31.403 3 -1.7822783003424987 0.43538073154728146 1.0 ['ENSG00000148308|ENST00000372097|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5', 'nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5'] 68396 7782 LTSTRHRRN True NCI_RA007_Epitope_Rep1 1139.6271863723098 1139.6260899358601 34.261 2 -1.7823116363644362 0.43538073154728146 1.0 ['ENSG00000095777|ENST00000642920|MYO3A', 'MYO3A|p.R1013Pfs*5|1|0.15|ENSG00000095777|chr10:26166100-26166101|-/C|frameshift_variant', 'nc|ENSG00000095777|Q8NEV4-2|MYO3A'] 114000 14934 TRLPPPIDPR True PC9_epitope_Rep5 1160.6665915727997 1160.66548993586 62.448 2 -1.782320523450274 0.43538073154728146 1.0 ['ENST00000372906.2_1_20:43104570-43108633:+|nuORF'] 89994 26468 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 110.48 1 -1.7825841828882911 0.4354314946619217 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 115174 16087 TVALLLEA True PC9_epitope_Rep5 828.49566965388 828.49456993586 66.867 2 -1.7828815469905184 0.43546629300949713 1.0 ['ENSG00000154065|ENST00000592179|ANKRD29'] 77929 19612 PAILLMFL True PC9_epitope_Rep4 916.54559705176 916.54448993586 83.556 2 -1.7829145480711037 0.43546629300949713 1.0 ['ENSG00000149488|ENST00000358864|TMC2'] 15706 6434 EDAERREREER True H1975_Epitope_Rep3 1473.6920310264902 1473.6909299358601 29.725 2 -1.783179726445598 0.43547346884312593 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 137291 27120 YLGKAKPL True PC9_epitope_Rep5 888.5432885526399 888.54274496793 111.03 1 -1.7832506167079318 0.43547346884312593 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 137290 27045 YLGKAKPL True PC9_epitope_Rep5 888.5432885526399 888.54274496793 110.65 1 -1.7833301459054771 0.43547346884312593 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 134611 10094 WWFGVKFA True PC9_epitope_Rep4 1039.5279728416697 1039.52686993586 46.497 2 -1.7834641290191153 0.43547346884312593 1.0 ['ENSG00000164181|ENST00000508821|ELOVL7'] 37615 4419 GYSWRVILLRN True PC9_epitope_Rep6 1375.77245362367 1375.7707949037901 24.14 3 -1.7835966028336248 0.43547346884312593 1.0 ['ENSG00000204923|ENST00000377957|FBXO48'] 38459 16440 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 69.991 2 -1.7837083122142925 0.43547346884312593 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 62859 8181 LMNCCKTVIYF True NCI_RA007_Epitope_Rep5 1333.62327240245 1333.62216993586 38.149 2 -1.7837761585173784 0.43547346884312593 1.0 ['ENST00000361360.3_2_2:105474794-105474911:+|nuORF'] 29643 10986 FVLQWLDE True H1975_Epitope_Rep1 1048.5229470308798 1048.52184993586 47.224 2 -1.7839005004728767 0.43547346884312593 1.0 ['ENSG00000198722|ENST00000635942|UNC13B', 'UBAP1-UNC13B|1|fusion', 'nc|ENSG00000198722|O14795|UNC13B', 'nc|ENSG00000198722|O14795-2|UNC13B'] 32241 20476 GFHMFIPP True NCI_RA007_Epitope_Rep3 944.4578446765199 944.45674993586 89.205 2 -1.783918396580799 0.43547346884312593 1.0 ['nc|ENSG00000085382|Q8IYU2-4|HACE1', 'ENSG00000085382|ENST00000262903|HACE1', 'nc|ENSG00000085382|Q8IYU2-2|HACE1', 'nc|ENSG00000085382|Q8IYU2-3|HACE1'] 33146 23309 GKPSKKKNRKA True PC9_epitope_Rep2 1240.7727879768402 1240.7716899358602 95.134 2 -1.7839339547326072 0.43547346884312593 1.0 ['ENST00000349824.8_1_7:50470235-50470343:+|nuORF'] 15791 12805 EDGGGGGR True H1975_Epitope_Rep1 703.28853042195 703.28798496793 54.318 1 -1.78405339509507 0.43548602308359463 1.0 ['ENST00000294428.7_1_1:65210812-65211007:+|nuORF'] 121604 20160 VGLCLFPIKYL True PC9_epitope_Rep6 1264.72535231888 1264.7242499358601 90.218 2 -1.7841389018887124 0.43548602308359463 1.0 ['ENST00000309922.6_1_3:101284860-101285061:+|nuORF'] 90877 24103 RLAQELRDV True PC9_epitope_Rep2 1098.61455599994 1098.6134499358602 98.213 2 -1.784338818974783 0.435493734503041 1.0 ['ENSG00000110719|ENST00000265686|TCIRG1', 'ENST00000533947.1_1_11:67808738-67810499:+|nuORF'] 108534 3912 TEFVFLKISRL True H1975_Epitope_Rep3 1351.7863723523096 1351.78471490379 20.169 3 -1.7844741592590534 0.435493734503041 1.0 ['nc|ENSG00000131018|Q8NF91-12|SYNE1'] 90996 22263 RLKAGHGG True PC9_epitope_Rep4 794.4511195032999 794.45002993586 93.875 2 -1.784509044542469 0.435493734503041 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 127078 9558 VPYYDLFM True NCI_RA007_Epitope_Rep4 1046.4783053375797 1046.4772099358602 43.613 2 -1.7847229805413176 0.4355139979097641 1.0 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5', 'ENST00000493492.2_1_13:98655270-98659627:+|nuORF'] 56320 6899 LDREAIDP True NCI_RA007_Epitope_Rep3 927.4661604307498 927.46506993586 34.242 2 -1.7847655775654254 0.4355139979097641 1.0 ['ENSG00000074276|ENST00000261944|CDHR2', 'CDHR2|p.T807Hfs*14|2|0.22|ENSG00000074276|chr5:176584693-176584694|-/C|frameshift_variant'] 131600 12832 VVWSSEKT True PC9_epitope_Rep6 934.47599683846 934.47544496793 60.867 1 -1.7848218414464885 0.4355139979097641 1.0 ['nc|ENSG00000234616|O75564|JRK', 'ENSG00000234616|ENST00000612905|JRK'] 79569 20756 PGTADSTL True PC9_epitope_Rep6 760.3602983798801 760.35920993586 92.597 2 -1.7848811463402032 0.4355139979097641 1.0 ['NPAP1|p.G992A|1|0.12|ENSG00000185823|chr15:24678842-24678842|G/C|missense_variant'] 80068 17298 PKGKRSLN True H1975_Epitope_Rep2 898.5348491272599 898.53374993586 71.829 2 -1.7849022734797864 0.4355139979097641 1.0 ['NPVF|p.E54K|2|0.22|ENSG00000105954|chr7:25227005-25227005|C/T|missense_variant'] 69332 17319 LVPRGWHS True PC9_epitope_Rep6 950.5086343794201 950.50752993586 79.231 2 -1.7850419629342458 0.43555362840910355 1.0 ['ENST00000368086.5_2_1:160064936-160068275:-|nuORF'] 28349 17982 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 75.954 2 -1.785153101750051 0.4355599039402295 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 67294 9361 LTDPFLERITE True H1975_Epitope_Rep1 1332.6925315371197 1332.69142993586 40.914 2 -1.785492580264433 0.43563288676413364 1.0 ['ENSG00000197275|ENST00000336148|RAD54B'] 137451 15696 YLNNKKTQQRR True PC9_epitope_Rep5 1447.80079362983 1447.7996899358602 65.383 2 -1.7857050589325478 0.4356391612745425 1.0 ['ENST00000461502.1_1_13:32999968-33006966:-|nuORF'] 138711 11295 YRVNYDKLGWK True H1975_Epitope_Rep3 1440.75138382592 1440.75028993586 48.552 2 -1.7857859769910727 0.4356676709617886 1.0 ['ENSG00000172901|ENST00000357872|LVRN', 'nc|ENSG00000172901|Q6Q4G3-2|LVRN', 'nc|ENSG00000172901|Q6Q4G3-3|LVRN', 'nc|ENSG00000172901|Q6Q4G3-4|LVRN'] 73390 12446 NERLQHYFNQH True NCI_RA007_Epitope_Rep2 1484.6909088276802 1484.68980993586 53.022 2 -1.7860728465337126 0.43577400275714856 1.0 ['nc|ENSG00000066933|B2RTY4-5|MYO9A', 'nc|ENSG00000066933|B2RTY4-2|MYO9A', 'ENSG00000066933|ENST00000356056|MYO9A', 'nc|ENSG00000066933|B2RTY4-4|MYO9A', 'MYO9A|p.R1220Vfs*8|1|0.12|ENSG00000066933|chr15:71898845-71898845|G/-|frameshift_variant', 'ENST00000563542.5_1_15:72185266-72338904:-|nuORF', 'nc|ENSG00000066933|B2RTY4-3|MYO9A'] 40405 8192 HRWLDIKR True PC9_epitope_Rep2 1122.6410455312998 1122.63940490379 36.869 3 -1.7861696821334607 0.4357768587691213 1.0 ['LTR1_dup85|chr7:101629186-101629993:-|1.961039395768969|0.0003248618387484|12.56|495.0|10|2|sense'] 60296 7489 LIESAAAF True H1975_Epitope_Rep3 820.4330693973199 820.43196993586 33.787 2 -1.7862074194946118 0.4357768587691213 1.0 ['nc|ENSG00000164188|Q86VV4-2|RANBP3L', 'ENSG00000164188|ENST00000296604|RANBP3L', 'nc|ENSG00000164188|Q86VV4-3|RANBP3L'] 104409 3939 SSHTPIQFGR True NCI_RA007_Epitope_Rep2 1128.5676058075198 1128.56650993586 19.958 2 -1.7862192275328583 0.4357768587691213 1.0 ['ENST00000375587.7_2_9:95088363-95094616:+|nuORF'] 122102 24526 VGRFGRRRAT True PC9_epitope_Rep4 1174.6795562983398 1174.67844993586 102.83 2 -1.7863068554018784 0.4357768587691213 1.0 ['ENSG00000071677|ENST00000165524|PRLH'] 63526 23326 LPKLSCGVK True PC9_epitope_Rep1 943.5524733373499 943.5519249679301 94.514 1 -1.7864643454935152 0.4357956756155856 1.0 ['CON__Q32PI4', 'ENSG00000205403|ENST00000394634|CFI'] 95010 13752 RYQHLFWWRWQ True NCI_RA007_Epitope_Rep2 1704.84259887216 1704.8415099358601 58.138 2 -1.7864672609697745 0.4357956756155856 1.0 ['chrX:97120275-97141665|243|53.54|0.12|8.77|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|9'] 81154 20761 PPKRGGPC True PC9_epitope_Rep4 810.4170424936998 810.41649496793 88.012 1 -1.7865361067063958 0.4357956756155856 1.0 ['ENST00000598782.1_1_19:4785174-4785513:-|nuORF'] 131384 5349 VVSQSAHLE True NCI_RA007_Epitope_Rep3 968.4927095317599 968.49160993586 28.048 2 -1.7866123510680043 0.4358130641647027 1.0 ['CNKSR2|p.L206V|1|0.16|ENSG00000149970|chrX:21490513-21490513|C/G|missense_variant'] 107677 22345 TAKKKLMP True PC9_epitope_Rep1 915.5575587177898 915.55646993586 90.764 2 -1.7866991162255348 0.435830452327223 1.0 ['ENSG00000138829|ENST00000262464|FBN2'] 125777 17144 VNKDKGRP True NCI_RA007_Epitope_Rep5 912.5141136826799 912.5130099358599 72.716 2 -1.787152411882177 0.43587093045227693 1.0 ['ENSG00000165138|ENST00000353234|ANKS6', 'nc|ENSG00000165138|Q68DC2-4|ANKS6'] 10466 19935 CMSVIVSC True NCI_RA007_Epitope_Rep5 840.35436777776 840.35326993586 83.594 2 -1.7873093331455077 0.43587093045227693 1.0 ['ENSG00000187123|ENST00000334166|LYPD6'] 30845 19586 GAQKPPGD True PC9_epitope_Rep3 768.37661715036 768.37552993586 80.574 2 -1.7873219122645054 0.43587093045227693 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 62115 24183 LLPCLHSA True PC9_epitope_Rep3 852.45275929608 852.45166993586 98.31 2 -1.787364482201315 0.43587093045227693 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 48103 25051 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 102.94 3 -1.7873969459857195 0.43587093045227693 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 66244 19482 LSPVRPQDLWI True H1975_Epitope_Rep1 1322.7346711326197 1322.73356993586 81.13 2 -1.7875035490581723 0.43587093045227693 1.0 ['ENST00000469998.1_1_9:140355949-140358668:-|nuORF', 'ENST00000492278.5_1_9:140357309-140358668:-|nuORF'] 125540 19846 VLWKKQKDK True PC9_epitope_Rep5 1171.7077281087898 1171.70608490379 81.385 3 -1.7875439890750502 0.43587093045227693 1.0 ['nc|ENSG00000116815|P19256-2|CD58', 'nc|ENSG00000116815|P19256-3|CD58', 'ENSG00000116815|ENST00000369489|CD58'] 128732 5852 VSPPTHGR True PC9_epitope_Rep3 849.44569976969 849.44460993586 27.575 2 -1.7875667005443232 0.43587093045227693 1.0 ['nc|ENSG00000101901|Q9NP73-4|ALG13', 'nc|ENSG00000101901|Q9NP73-3|ALG13', 'ENSG00000101901|ENST00000394780|ALG13'] 91406 6159 RNGQAPNE True PC9_epitope_Rep6 884.41004253696 884.40894993586 32.127 2 -1.7875976249700625 0.43587093045227693 1.0 ['ENSG00000159079|ENST00000290155|CFAP298'] 131205 21116 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 87.4 2 -1.787702287989012 0.43587093045227693 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 30691 9899 GALPSGQK True NCI_RA007_Epitope_Rep2 756.41300265908 756.4124549679301 43.133 1 -1.7877883909783543 0.4358737815518334 1.0 ['ENSG00000182768|ENST00000379095|NGRN', 'ENST00000561573.1_1_15:90806992-90815017:+|nuORF'] 3868 13084 AHCGARAS True H1975_Epitope_Rep2 771.34460582943 771.3440549679301 55.45 1 -1.7879785567727644 0.4358737815518334 1.0 ['nc|ENSG00000084710|Q9Y2G0-2|EFR3B', 'ENSG00000084710|ENST00000403714|EFR3B'] 19935 19456 ELYREAPI True PC9_epitope_Rep2 989.5181960036098 989.51708993586 80.219 2 -1.7880082820044043 0.4358737815518334 1.0 ['ENSG00000118680|ENST00000237500|MYL12B', 'ENSG00000101608|ENST00000217652|MYL12A', 'ENST00000431574.1_1_6:33306912-33307269:+|nuORF'] 110856 5264 TKYKLDAK True NCI_RA007_Epitope_Rep3 965.5545815123298 965.55348993586 27.709 2 -1.7880226873575547 0.4358737815518334 1.0 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 31263 9696 GDRGGFGP True PC9_epitope_Rep1 761.3456513752499 761.3451049679301 42.152 1 -1.788101366575453 0.43588005157160004 1.0 ['ENSG00000089280|ENST00000254108|FUS', 'nc|ENSG00000089280|P35637-2|FUS', 'ENST00000483853.1_1_16:31202042-31202756:+|nuORF', 'ENST00000487509.6_1_16:31199536-31202756:+|nuORF'] 48147 26403 KAQILKRRLVP True PC9_epitope_Rep2 1320.87177374212 1320.8701349037901 107.89 3 -1.7882792722041831 0.43588632145199113 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 124784 10510 VLLAAEPLDV True H1975_Epitope_Rep1 1038.5961119711399 1038.5950099358602 45.379 2 -1.788497535306501 0.43591909313180704 1.0 ['ENSG00000182103|ENST00000329203|FAM181B'] 139221 24595 YSWVIRRDSK True PC9_epitope_Rep1 1308.6938689498 1308.69223490379 99.469 3 -1.788515886127917 0.43591909313180704 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 8605 15055 AVAGENARVI True PC9_epitope_Rep3 998.5508931142199 998.54978993586 63.039 2 -1.7885871105367623 0.43591909313180704 1.0 ['ENSG00000184672|ENST00000521268|RALYL', 'nc|ENSG00000184672|Q86SE5-3|RALYL'] 48831 11654 KERQEQRQRHE True NCI_RA007_Epitope_Rep2 1522.7712844066998 1522.7701899358601 49.924 2 -1.7886063240898853 0.43591909313180704 1.0 ['ENST00000394009.4_1_14:74486078-74489636:+|nuORF'] 53546 17421 KVPNFIGQYYK True NCI_RA007_Epitope_Rep2 1355.7237720957498 1355.7221249037902 72.503 3 -1.7886483796950927 0.43591909313180704 1.0 ['nc|ENSG00000177414|Q5VVX9-2|UBE2U', 'ENSG00000177414|ENST00000371077|UBE2U', 'nc|ENSG00000177414|Q5VVX9|UBE2U'] 65700 20263 LSHLKRTV True PC9_epitope_Rep5 952.5817993196799 952.58070993586 82.992 2 -1.788766884972363 0.43591909313180704 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1', 'ENST00000555062.1_1_14:102514125-102516009:+|nuORF'] 25401 10133 FEISFGSL True H1975_Epitope_Rep3 898.4436340810199 898.44252993586 44.021 2 -1.7889078874908728 0.43591909313180704 1.0 ['ENST00000465481.5_1_6:31633906-31635902:+|nuORF'] 110554 14293 TIRTHPTL True PC9_epitope_Rep3 937.5345147740899 937.53340993586 60.065 2 -1.7890181463435986 0.43594274410437645 1.0 ['nc|ENSG00000152939|Q8N4S9-3|MARVELD2', 'ENSG00000152939|ENST00000325631|MARVELD2', 'nc|ENSG00000152939|Q8N4S9-2|MARVELD2', 'MARVELD2|p.C362Kfs*6|1|0.21|ENSG00000152939|chr5:69420468-69420472|TTGCC/-|frameshift_variant'] 20522 20700 EPWIKKLK True PC9_epitope_Rep4 1040.6382515666398 1040.6371499358602 87.783 2 -1.7890374547577879 0.43594274410437645 1.0 ['ENSG00000118997|ENST00000312428|DNAH7', 'DNAH7|p.D2288Efs*7|1|0.18|ENSG00000118997|chr2:195864791-195864791|A/-|frameshift_variant'] 90114 18313 RGRRHRLQYR True NCI_RA007_Epitope_Rep4 1396.80246539568 1396.80082490379 79.222 3 -1.7892974877497987 0.43595470658176927 1.0 ['ZFR2|p.R698Gfs*6|1|0.19|ENSG00000105278|chr19:3816685-3816685|G/-|frameshift_variant', 'ENSG00000105278|ENST00000262961|ZFR2', 'ZFR2|p.V487L|1|0.33|ENSG00000105278|chr19:3822113-3822113|C/A|missense_variant'] 117763 23403 VALKPLGGL True PC9_epitope_Rep6 866.5589386167799 866.5583949679301 103.12 1 -1.7893971793569834 0.43595470658176927 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 666 12662 AATVVVLRV True PC9_epitope_Rep2 926.5913013742198 926.59020993586 54.011 2 -1.7894239429461745 0.43595470658176927 1.0 ['ENST00000340634.4_1_3:142681054-142682041:-|nuORF'] 38458 16248 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 69.252 2 -1.7895001901859755 0.43595470658176927 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 114607 17075 TSLRVGRK True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56030993586 72.448 2 -1.7897322837252236 0.43595470658176927 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 81584 19269 PRLFPLAWT True NCI_RA007_Epitope_Rep4 1099.61785047523 1099.61727496793 83.318 1 -1.7897458436610454 0.43595470658176927 1.0 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155106165-155106540:+|nuORF'] 43579 24743 IIFIKLNL True H1975_Epitope_Rep3 972.6371889374799 972.63608993586 102.91 2 -1.7897660167500897 0.43595470658176927 1.0 ['ENST00000344302.8_1_X:46332443-46332647:+|nuORF'] 27386 21842 FMYVTLLL True NCI_RA007_Epitope_Rep2 998.5510763550199 998.54996993586 90.554 2 -1.7897973266969442 0.43595470658176927 1.0 ['ENST00000405334.5_1_2:37334471-37336383:-|nuORF'] 101056 16159 SLTPAPPAL True PC9_epitope_Rep4 865.49091862661 865.49037496793 70.097 1 -1.7898152751115763 0.43595470658176927 1.0 ['ENSG00000187942|ENST00000344642|LDLRAD2'] 124690 23887 VLISTGTL True H1975_Epitope_Rep2 802.48001958974 802.47892993586 98.393 2 -1.7898675490293252 0.4359831985065339 1.0 ['ENST00000501695.3_1_5:147758402-147763328:-|nuORF'] 131341 17079 VVRRSKKV True H1975_Epitope_Rep2 970.6399829021399 970.63888993586 70.96 2 -1.7899452846859296 0.4359957330488699 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'nc|ENSG00000132466|O75179-4|ANKRD17'] 44188 14158 ILRIPSTSGQR True H1975_Epitope_Rep1 1226.70951901394 1226.70842993586 59.633 2 -1.7899535837462686 0.4359957330488699 1.0 ['OR11L1|p.R234Q|1|0.57|ENSG00000197591|chr1:247841196-247841196|C/T|missense_variant'] 47046 25138 IVSRIQRYC True H1975_Epitope_Rep3 1136.6124478249599 1136.61134993586 104.57 2 -1.790126861356627 0.4360048444982722 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF'] 12194 5052 DINDNAPQVL True NCI_RA007_Epitope_Rep1 1097.53530261973 1097.5342099358602 23.735 2 -1.790139167553819 0.4360048444982722 1.0 ['ENSG00000170558|ENST00000269141|CDH2', 'nc|ENSG00000170558|P19022-2|CDH2'] 26654 16620 FLAHLQRAS True PC9_epitope_Rep6 1041.5719629119699 1041.5708699358602 76.392 2 -1.7901513007799668 0.4360048444982722 1.0 ['ENST00000508662.5_1_5:149618053-149669203:-|nuORF'] 62358 15991 LLRMIILPLVV True H1975_Epitope_Rep2 1278.8461361579 1278.84448490379 66.708 3 -1.790151726217759 0.4360048444982722 1.0 ['ENSG00000105281|ENST00000542575|SLC1A5'] 3150 7223 AGDWVVSAW True PC9_epitope_Rep2 989.4606811274899 989.45958993586 33.173 2 -1.7901774642571529 0.4360048444982722 1.0 ['ENST00000359904.7_1_17:66244441-66244810:+|nuORF'] 27202 13452 FLSVTRAVSY True H1975_Epitope_Rep3 1141.6131590176099 1141.61206993586 57.016 2 -1.7902570247138048 0.4360111111111111 1.0 ['nc|ENSG00000101180|Q9Y5N1-3|HRH3', 'nc|ENSG00000101180|Q9Y5N1-7|HRH3', 'nc|ENSG00000101180|Q9Y5N1-4|HRH3', 'ENSG00000101180|ENST00000340177|HRH3', 'nc|ENSG00000101180|Q9Y5N1-2|HRH3', 'nc|ENSG00000101180|Q9Y5N1-5|HRH3', 'nc|ENSG00000101180|Q9Y5N1-6|HRH3'] 128479 24429 VSFCVGYV True PC9_epitope_Rep4 872.4102257777598 872.40912993586 102.45 2 -1.7905070380930252 0.4360313315926893 1.0 ['nc|ENSG00000163755|Q969F9-2|HPS3', 'HPS3|p.E942*|1|0.3|ENSG00000163755|chr3:149167916-149167917|-/C|frameshift_variant', 'ENSG00000163755|ENST00000296051|HPS3', 'ENST00000486530.1_1_3:148847510-148871436:+|nuORF', 'HPS3|p.S265Kfs*2|1|0.19|ENSG00000163755|chr3:149141091-149141092|-/A|frameshift_variant'] 81042 8920 PPAEKPAAP True PC9_epitope_Rep3 876.4705175351999 876.46942993586 39.261 2 -1.7905709322496377 0.4360313315926893 1.0 ['ENSG00000129951|ENST00000520876|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-2|PLPPR3', 'nc|ENSG00000129951|Q6T4P5-3|PLPPR3'] 117764 23569 VALKPLGGL True PC9_epitope_Rep6 866.5589386167799 866.5583949679301 103.81 1 -1.7906857029293128 0.4360313315926893 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 18080 19132 EIKKHRARV True H1975_Epitope_Rep2 1135.6938093801498 1135.6921649037902 79.41 3 -1.7907433324341315 0.4360313315926893 1.0 ['ENST00000472303.1_1_22:36545150-36545344:-|nuORF'] 94319 3412 RWVLFHFWFKN True NCI_RA007_Epitope_Rep1 1578.8248235496997 1578.8231849037902 17.172 3 -1.7907637638951217 0.4360313315926893 1.0 ['ENST00000592061.1_1_19:19738235-19738493:-|nuORF'] 53139 22277 KSLSEKRENV True PC9_epitope_Rep6 1188.64625005104 1188.64459490379 98.658 3 -1.7908062091894084 0.4360375974935004 1.0 ['ENSG00000140526|ENST00000352732|ABHD2'] 118717 6636 VEDAKGLR True NCI_RA007_Epitope_Rep4 886.4872302284998 886.48668496793 32.15 1 -1.7909694049578677 0.43604812638174484 1.0 ['ENST00000477440.6_1_3:56992911-57112628:-|nuORF'] 43222 10149 IGWIVGCI True PC9_epitope_Rep5 859.4625957037899 859.46148993586 44.025 2 -1.7911740660606013 0.43604812638174484 1.0 ['ENSG00000240045|ENST00000489090|STRIT1'] 61146 14513 LLDERLVTL True H1975_Epitope_Rep2 1070.63356010902 1070.6324699358602 60.983 2 -1.7912662162668969 0.43604812638174484 1.0 ['ENSG00000176390|ENST00000324238|CRLF3', 'nc|ENSG00000176390|Q8IUI8-2|CRLF3', 'ENST00000511386.1_1_5:99285077-99285230:-|nuORF'] 7633 5270 ASLHVWGW True PC9_epitope_Rep5 954.47118624154 954.47008993586 25.287 2 -1.7913016028548674 0.43604812638174484 1.0 ['ENSG00000144407|ENST00000272847|PTH2R'] 111481 25302 TLLIVTIVAT True PC9_epitope_Rep2 1042.66379760814 1042.66327496793 103.0 1 -1.7913030174281315 0.43604812638174484 1.0 ['ENSG00000174125|ENST00000308979|TLR1'] 9287 13159 AVRTFVSH True H1975_Epitope_Rep3 915.4926499621099 915.49154993586 55.865 2 -1.7913711861277053 0.43604812638174484 1.0 ['ENST00000591478.1_1_16:5080487-5083590:-|nuORF', 'nc|ENSG00000103174|Q9UK23-3|NAGPA', 'ENST00000568202.5_1_16:5075546-5083878:-|nuORF', 'nc|ENSG00000103174|Q9UK23-2|NAGPA', 'ENSG00000103174|ENST00000312251|NAGPA'] 11029 5020 DDLEEEDIKR True NCI_RA007_Epitope_Rep5 1260.5833750109598 1260.58226993586 26.012 2 -1.7913737370714273 0.43604812638174484 1.0 ['ENSG00000149231|ENST00000646818|CCDC82', 'nc|ENSG00000149231|Q8N4S0-2|CCDC82', 'ENST00000530106.1_1_11:96116391-96117917:-|nuORF'] 122660 7016 VGTPVVLAQ True PC9_epitope_Rep4 882.51746772762 882.51636993586 34.234 2 -1.791701076436131 0.43608771968804855 1.0 ['ENST00000500813.6_1_4:183811817-183811883:-|nuORF'] 25362 11963 FEHALMLF True PC9_epitope_Rep5 1006.49462410806 1006.49352993586 51.012 2 -1.7918893343015405 0.43612388633384436 1.0 ['ENST00000452157.5_1_5:56218957-56234137:-|nuORF', 'nc|ENSG00000155545|Q7Z3K6-4|MIER3', 'nc|ENSG00000155545|Q7Z3K6-3|MIER3', 'ENSG00000155545|ENST00000381199|MIER3', 'nc|ENSG00000155545|Q7Z3K6-2|MIER3'] 125538 16699 VLWHRENNE True PC9_epitope_Rep1 1195.5734194639497 1195.5723299358601 69.061 2 -1.791963535800694 0.43612388633384436 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 32425 6869 GGGREACH True NCI_RA007_Epitope_Rep2 785.3238703848499 785.32332496793 31.334 1 -1.7919880430692574 0.43612388633384436 1.0 ['ENST00000235307.6_1_1:184356254-184446568:+|nuORF'] 79257 17656 PGGRGPIF True PC9_epitope_Rep5 799.4340724568299 799.43296993586 72.926 2 -1.7920161635557874 0.43612388633384436 1.0 ['ENSG00000169857|ENST00000306730|AVEN'] 79447 6218 PGPLSKQGS True NCI_RA007_Epitope_Rep4 869.46068112749 869.45958993586 30.525 2 -1.792076973166154 0.436130150301603 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 137874 23673 YPLIITIIM True PC9_epitope_Rep2 1075.63514033215 1075.63404993586 96.533 2 -1.7922290193312538 0.43616974005776493 1.0 ['ABCA5|p.Y1038Lfs*45|1|0.17|ENSG00000154265|chr17:69267971-69267974|AAGT/-|frameshift_variant', 'nc|ENSG00000154265|Q8WWZ7-2|ABCA5', 'ENSG00000154265|ENST00000392676|ABCA5'] 58938 17159 LFVVRQEQ True PC9_epitope_Rep1 1017.5607295219297 1017.55962993586 70.823 2 -1.7925280739343052 0.4362044833485148 1.0 ['ENSG00000184985|ENST00000507866|SORCS2'] 120536 15046 VGAAERGP True H1975_Epitope_Rep3 755.3926015676699 755.3920549679301 63.268 1 -1.7927000333419685 0.4362044833485148 1.0 ['ENST00000339852.4_1_19:39687849-39688705:+|nuORF'] 97676 16393 SHDGPAPL True PC9_epitope_Rep6 792.3766171503601 792.37552993586 75.446 2 -1.7927914602498933 0.43623296268731326 1.0 ['ENST00000561028.5_1_14:24583940-24584093:-|nuORF'] 123662 23972 VIMVMKKLW True PC9_epitope_Rep4 1146.6657292677799 1146.6646299358601 100.68 2 -1.7928999119972342 0.43624064159242887 1.0 ['OR4D5|p.A297V|1|0.22|ENSG00000171014|chr11:123940506-123940506|C/T|missense_variant'] 36655 21562 GVLPSPEVVL True H1975_Epitope_Rep1 1008.5855472874399 1008.58444993586 89.604 2 -1.7929727895872472 0.43624064159242887 1.0 ['ENST00000534381.1_1_11:226080-230657:-|nuORF', 'ENST00000529055.5_1_11:224232-236273:-|nuORF'] 38322 21288 HFTRQLARQ True H1975_Epitope_Rep2 1155.6261237431497 1155.62446490379 88.096 3 -1.7929821602884906 0.43624064159242887 1.0 ['ATAD2|p.S1344Kfs*28|1|0.15|ENSG00000156802|chr8:123323038-123323039|-/T|frameshift_variant', 'ENSG00000156802|ENST00000287394|ATAD2', 'ENST00000521496.5_1_8:124357024-124408597:-|nuORF', 'ATAD2|p.Q699Rfs*7|1|0.17|ENSG00000156802|chr8:123347210-123347210|C/-|frameshift_variant', 'ENST00000521903.5_1_8:124361561-124413087:-|nuORF', 'ENST00000519124.5_1_8:124382257-124392860:-|nuORF'] 42898 23088 IFVFMFPL True H1975_Epitope_Rep1 1012.5455970517598 1012.54448993586 96.007 2 -1.7931214100187334 0.4362913348217757 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 82640 19933 PVLLKILSQQ True NCI_RA007_Epitope_Rep5 1137.71214478289 1137.71050490379 83.586 3 -1.7932662078580772 0.4362975963033723 1.0 ['ENSG00000117000|ENST00000372771|RLF'] 121271 10635 VGGWGPGD True H1975_Epitope_Rep3 743.3238533015099 743.3233049679301 45.981 1 -1.7934031296313415 0.43631496517788715 1.0 ['ENST00000588083.5_1_19:39104803-39108481:-|nuORF'] 129547 5674 VTGCRFHVL True PC9_epitope_Rep5 1030.5382202555397 1030.53712993586 26.821 2 -1.7934682830011164 0.43632122625791403 1.0 ['nc|ENSG00000204519|Q7Z340-3|ZNF551', 'nc|ENSG00000204519|Q7Z340-2|ZNF551', 'ENSG00000204519|ENST00000282296|ZNF551'] 104398 23034 SSHDASLH True H1975_Epitope_Rep2 852.3725943990801 852.37148993586 95.054 2 -1.793701340643706 0.43634970176939053 1.0 ['nc|ENSG00000151718|Q6AWC2-4|WWC2', 'ENSG00000151718|ENST00000403733|WWC2', 'nc|ENSG00000151718|Q6AWC2-6|WWC2', 'nc|ENSG00000151718|Q6AWC2-5|WWC2', 'nc|ENSG00000151718|Q6AWC2-3|WWC2', 'nc|ENSG00000151718|Q6AWC2-2|WWC2'] 131977 17624 VYGFMMLVL True PC9_epitope_Rep6 1071.54969645603 1071.54858993586 80.43 2 -1.794193656185636 0.4364080635308491 1.0 ['ENSG00000077147|ENST00000371142|TM9SF3', 'PIK3AP1-TM9SF3|1|fusion'] 57654 17097 LELWVNYYVRW True PC9_epitope_Rep3 1539.7874349814701 1539.78632993586 70.914 2 -1.7943886153465325 0.4364080635308491 1.0 ['nc|ENSG00000063601|Q13613|MTMR1', 'ENSG00000063601|ENST00000445323|MTMR1', 'ENST00000488357.1_3_X:149924253-149933206:+|nuORF'] 66200 14081 LSPLRPPSV True PC9_epitope_Rep2 964.5705659296399 964.56946993586 59.438 2 -1.7944169267209182 0.4364080635308491 1.0 ['KMT2D|p.G3151Afs*4|1|0.17|ENSG00000167548|chr12:49037908-49037908|G/-|frameshift_variant', 'KMT2D|p.A3440Vfs*11|1|0.21|ENSG00000167548|chr12:49034848-49034848|G/-|frameshift_variant', 'KMT2D|p.Q3370Pfs*53|2|0.24|ENSG00000167548|chr12:49037247-49037248|-/G|frameshift_variant', 'KMT2D|p.V3089Wfs*30|1|0.39|ENSG00000167548|chr12:49038091-49038091|C/-|frameshift_variant', 'KMT2D|p.R3082Gfs*14|1|0.2|ENSG00000167548|chr12:49038108-49038112|TCCCG/-|frameshift_variant', 'KMT2D|p.R2687Qfs*4|1|0.4|ENSG00000167548|chr12:49039604-49039604|C/-|frameshift_variant', 'KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant', 'KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant', 'KMT2D|p.T4938Pfs*57|1|0.34|ENSG00000167548|chr12:49027155-49027155|G/-|frameshift_variant', 'KMT2D|p.P4929Lfs*66|1|0.15|ENSG00000167548|chr12:49027180-49027180|G/-|frameshift_variant', 'KMT2D|p.G5182Afs*61|1|0.1|ENSG00000167548|chr12:49026421-49026421|C/-|frameshift_variant', 'KMT2D|p.C1400Wfs*30|1|0.26|ENSG00000167548|chr12:49047996-49048001|TGAGAG/C|frameshift_variant', 'ENSG00000167548|ENST00000301067|KMT2D', 'nc|ENSG00000167548|O14686-3|KMT2D', 'KMT2D|p.Q4254Rfs*24|1|0.27|ENSG00000167548|chr12:49031945-49031945|G/-|frameshift_variant', 'KMT2D|p.P4209Tfs*124|2|0.24|ENSG00000167548|chr12:49032079-49032080|GG/-|frameshift_variant'] 170 11076 AAEAELAAAQR True NCI_RA007_Epitope_Rep5 1099.5621860739097 1099.56108993586 49.237 2 -1.7944290935539913 0.4364080635308491 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 97473 24002 SGKSRLVQL True PC9_epitope_Rep2 986.58727862294 986.58618993586 97.819 2 -1.794581094304609 0.43641432315962503 1.0 ['nc|ENSG00000203880|Q9NV79-2|PCMTD2', 'ENSG00000203880|ENST00000308824|PCMTD2'] 75221 9686 NPIFWEEVS True H1975_Epitope_Rep1 1119.5236753068698 1119.52256993586 42.182 2 -1.7946048041439175 0.43642058264935524 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 81919 4753 PSNNLNLLS True NCI_RA007_Epitope_Rep4 970.5083595959001 970.50726993586 24.717 2 -1.7946519953457234 0.43642825410928476 1.0 ['ENSG00000165392|ENST00000298139|WRN'] 120638 10954 VGAKHERHIF True NCI_RA007_Epitope_Rep2 1192.64652483456 1192.6454299358602 47.217 2 -1.7946919968736454 0.43642825410928476 1.0 ['SOS1|p.E1074Kfs*32|1|0.33|ENSG00000115904|chr2:38995248-38995249|TC/-|frameshift_variant', 'ENSG00000115904|ENST00000402219|SOS1'] 52570 25093 KPVQGGGL True NCI_RA007_Epitope_Rep5 754.4337381036598 754.43264993586 104.02 2 -1.7947391348563086 0.43642825410928476 1.0 ['NCOA1|p.L960P|1|0.2|ENSG00000084676|chr2:24728469-24728469|T/C|missense_variant'] 127240 23763 VQILLKDPI True NCI_RA007_Epitope_Rep4 1037.6484818971699 1037.64738993586 103.02 2 -1.7949253863128263 0.4364345131662243 1.0 ['ENST00000462171.1_1_1:20076843-20097914:-|nuORF', 'nc|ENSG00000162542|Q5TGY1-2|TMCO4', 'ENSG00000162542|ENST00000294543|TMCO4'] 104277 9021 SSEEDLLVSW True NCI_RA007_Epitope_Rep1 1163.5346339133898 1163.53352993586 39.092 2 -1.7951390643531708 0.4364401603571389 1.0 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1', 'ENST00000454762.1_1_6:43472456-43473590:+|nuORF'] 45076 25227 IQRNRVKHEK True PC9_epitope_Rep2 1306.7582005418597 1306.7571099358602 102.7 2 -1.795161856957717 0.4364401603571389 1.0 ['DNAH5|p.E3914K|1|0.21|ENSG00000039139|chr5:13735152-13735152|C/T|missense_variant'] 38896 7206 HIIQRKHDPRH True PC9_epitope_Rep5 1435.79089765247 1435.78924490379 32.683 3 -1.795166380578966 0.4364401603571389 1.0 ['ENSG00000164125|ENST00000585682|GASK1B', 'nc|ENSG00000164125|Q6UWH4-2|GASK1B'] 35286 25360 GSQLRLPP True PC9_epitope_Rep2 866.4974009893799 866.49630993586 103.23 2 -1.7951974750926016 0.4364401603571389 1.0 ['ENST00000608809.1_1_21:30396989-30397052:-|nuORF'] 121990 5423 VGQDSIHV True NCI_RA007_Epitope_Rep3 853.4293809992099 853.42828993586 28.342 2 -1.7952040174716566 0.4364401603571389 1.0 ['ENSG00000110799|ENST00000261405|VWF'] 48145 26275 KAQILKRRLVP True PC9_epitope_Rep2 1320.87177374212 1320.8701349037901 107.21 3 -1.7952489503378217 0.4364401603571389 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 95433 23534 SALEVLRR True PC9_epitope_Rep5 942.5610638750999 942.55996993586 95.508 2 -1.7953417056418508 0.4364401603571389 1.0 ['nc|ENSG00000198216|Q15878-2|CACNA1E', 'nc|ENSG00000198216|Q15878-3|CACNA1E', 'ENSG00000198216|ENST00000367573|CACNA1E', 'CACNA1E|p.G403V|1|0.31|ENSG00000198216|chr1:181715374-181715374|G/T|missense_variant'] 16234 6180 EEGIEEQVLK True NCI_RA007_Epitope_Rep2 1172.5924831426798 1172.5913899358602 28.645 2 -1.7953471759469166 0.4364401603571389 1.0 ['ENSG00000242441|ENST00000403751|GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-2|STON1', 'ENSG00000068781|ENST00000394754|STON1-GTF2A1L', 'nc|ENSG00000243244|Q9Y6Q2-3|STON1'] 119430 6819 VEPHSPSPSSK True PC9_epitope_Rep1 1150.56185172074 1150.56074993586 31.035 2 -1.7954250918764254 0.43644157199808997 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 103114 22639 SQLQRPPEA True PC9_epitope_Rep1 1024.5301576696397 1024.5290699358602 91.887 2 -1.7954275521501422 0.43644157199808997 1.0 ['nc|ENSG00000085982|Q9NVE5|USP40', 'ENSG00000085982|ENST00000678225|USP40', 'nc|ENSG00000085982|Q9NVE5-3|USP40'] 140081 22803 YVNQIILF True PC9_epitope_Rep5 1008.5644179200399 1008.56332993586 92.702 2 -1.7955147688037276 0.43644783014258426 1.0 ['ENSG00000126773|ENST00000406854|PCNX4'] 86455 20388 QQRSRAFYRIQ True NCI_RA007_Epitope_Rep2 1451.7745788819898 1451.7734899358602 84.368 2 -1.7958105756749616 0.43646519271984274 1.0 ['SLC8A3|p.K349R|1|0.21|ENSG00000100678|chr14:70167377-70167377|T/C|missense_variant'] 121359 24252 VGHSAGHP True NCI_RA007_Epitope_Rep2 760.36163579256 760.36052993586 101.84 2 -1.795878935939045 0.4364714504630555 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 89993 26395 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 110.12 1 -1.7960466486682496 0.4364902228588561 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 27486 11419 FPATGSSY True H1975_Epitope_Rep3 828.3653837603199 828.36483496793 49.04 1 -1.7960823301403652 0.4364902228588561 1.0 ['ENST00000320241.4_1_16:86613413-86613659:+|nuORF'] 89992 26313 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 109.71 1 -1.796152694447425 0.4364902228588561 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 62107 21805 LLNRFILL True PC9_epitope_Rep5 1000.6433369470799 1000.64222993586 88.906 2 -1.7961943621885732 0.43649648004619246 1.0 ['ENSG00000125170|ENST00000340099|DOK4'] 80587 14828 PLPALHSGR True PC9_epitope_Rep1 946.53484912726 946.53374993586 61.855 2 -1.796402317573365 0.43651384092650375 1.0 ['ENST00000329875.12_1_17:79890528-79890927:-|nuORF'] 121433 6340 VGIGALFR True H1975_Epitope_Rep3 831.49667271339 831.49556993586 29.377 2 -1.796486665329679 0.4365215074060092 1.0 ['ENST00000467673.5_1_1:39571193-39720158:+|nuORF'] 122168 19003 VGRKLVVF True PC9_epitope_Rep4 916.5858220709598 916.58472993586 81.186 2 -1.7965305903346698 0.4365215074060092 1.0 ['ENST00000438029.1_1_7:42951119-42951242:-|nuORF'] 39060 23017 HKTFFPSRGQ True H1975_Epitope_Rep2 1203.61489035311 1203.61324490379 94.986 3 -1.796534529332121 0.4365215074060092 1.0 ['ENSG00000124203|ENST00000371030|ZNF831'] 51838 23490 KKKRSEARRH True PC9_epitope_Rep2 1294.7694339318998 1294.76779490379 95.825 3 -1.7966314374538135 0.4365285549338307 1.0 ['ENSG00000173699|ENST00000433428|SPATA3'] 64727 19720 LRQDPPLIF True NCI_RA007_Epitope_Rep4 1097.62332977849 1097.62222993586 85.22 2 -1.79669380213302 0.4365285549338307 1.0 ['nc|ENSG00000085552|Q9P2J2-2|IGSF9', 'ENSG00000085552|ENST00000368094|IGSF9'] 123703 20781 VIPKRISPV True PC9_epitope_Rep1 1007.6491506035098 1007.64804993586 84.764 2 -1.7967107579700177 0.4365285549338307 1.0 ['nc|ENSG00000124145|P31431-2|SDC4', 'ENSG00000124145|ENST00000372733|SDC4'] 113070 8313 TPWLQRTEP True NCI_RA007_Epitope_Rep4 1126.5771078620598 1126.5760099358602 38.791 2 -1.7967395765286434 0.4365285549338307 1.0 ['ENST00000359866.8_1_19:17431114-17431327:+|nuORF'] 80163 13656 PKVAIIITDGK True NCI_RA007_Epitope_Rep2 1153.7070594024499 1153.7059699358601 57.76 2 -1.7967689420136705 0.4365285549338307 1.0 ['ENSG00000111799|ENST00000322507|COL12A1', 'nc|ENSG00000111799|Q99715-4|COL12A1'] 125215 14837 VLQPQRVL True PC9_epitope_Rep2 951.5865503469498 951.58544993586 62.335 2 -1.796936234727478 0.4365285549338307 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 18459 9068 EKKERHRR True H1975_Epitope_Rep1 1137.64792181689 1137.64682993586 39.787 2 -1.7970222476575826 0.4365285549338307 1.0 ['ENSG00000071462|ENST00000265758|BUD23', 'nc|ENSG00000071462|O43709-3|BUD23', 'ENST00000463307.5_1_7:73107559-73112213:+|nuORF', 'ENST00000436944.5_1_7:73101164-73117856:+|nuORF', 'ENST00000471215.1_1_7:73111917-73112213:+|nuORF'] 122040 23736 VGQQAQIPIAT True PC9_epitope_Rep3 1124.6189726740397 1124.6183749679299 96.586 1 -1.7970284199771422 0.4365285549338307 1.0 ['nc|ENSG00000134532|P35711-4|SOX5', 'nc|ENSG00000134532|P35711-2|SOX5', 'nc|ENSG00000134532|P35711-5|SOX5', 'ENSG00000134532|ENST00000451604|SOX5', 'nc|ENSG00000134532|P35711-3|SOX5'] 17884 18143 EIDKKYFE True H1975_Epitope_Rep2 1070.52842633414 1070.52732993586 75.195 2 -1.7970476141156206 0.4365285549338307 1.0 ['ALLC|p.T279K|1|0.14|ENSG00000151360|chr2:3697442-3697442|C/A|missense_variant'] 78682 15232 PEDCGQPGS True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 65.272 2 -1.797140877814176 0.4365285549338307 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 14585 9280 DVGRRRKH True NCI_RA007_Epitope_Rep5 1022.5845932843399 1022.58348993586 42.341 2 -1.797241801993938 0.4365341918294849 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 11402 8340 DFKGLGSG True PC9_epitope_Rep2 779.38136817763 779.38026993586 37.45 2 -1.7972628801372577 0.4365341918294849 1.0 ['ENST00000525582.1_1_1:26873450-26873871:+|nuORF'] 44192 9902 ILRNDSTV True PC9_epitope_Rep5 916.4977949122 916.49668993586 43.058 2 -1.7972890926149636 0.4365341918294849 1.0 ['nc|ENSG00000110218|Q96RD7-2|PANX1', 'ENSG00000110218|ENST00000227638|PANX1'] 62348 8477 LLRLCKEA True NCI_RA007_Epitope_Rep2 944.54772231008 944.54662993586 37.618 2 -1.797336233916106 0.4365341918294849 1.0 ['ENSG00000138606|ENST00000690270|SHF', 'nc|ENSG00000138606|Q7M4L6|SHF', 'nc|ENSG00000138606|Q7M4L6-2|SHF', 'ENST00000558685.1_1_15:45464079-45464229:-|nuORF'] 71747 11584 MMLQDQEHHWY True H1975_Epitope_Rep3 1516.62275480848 1516.6216499358602 49.686 2 -1.7973620561038446 0.4365341918294849 1.0 ['ENSG00000100665|ENST00000557004|SERPINA4'] 40560 20191 HSSPEGKEEPE True NCI_RA007_Epitope_Rep3 1224.5258601348398 1224.5242049037902 87.976 3 -1.7977040347607636 0.4365341918294849 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'ENST00000472650.1_1_2:219136156-219182765:+|nuORF', 'nc|ENSG00000127838|Q8N490-2|PNKD'] 64064 8835 LQDQVRASAT True H1975_Epitope_Rep2 1087.56218607391 1087.56108993586 38.951 2 -1.7977437386871784 0.4365341918294849 1.0 ['ENST00000278407.8_1_11:57382057-57382189:+|nuORF'] 31307 11288 GDYTWTEFD True PC9_epitope_Rep5 1132.43491987212 1132.43382993586 48.412 2 -1.7977770837993245 0.4365341918294849 1.0 ['nc|ENSG00000071539|Q15645-2|TRIP13', 'ENST00000512024.5_1_5:893053-908577:+|nuORF', 'ENSG00000071539|ENST00000166345|TRIP13'] 52632 6439 KQEENIDPMFN True NCI_RA007_Epitope_Rep1 1363.6078159369897 1363.6067099358602 29.067 2 -1.7979020590583814 0.43654670189383005 1.0 ['ENST00000532458.1_1_14:95582860-95590585:-|nuORF'] 139567 14672 YTNGSTVPSP True PC9_epitope_Rep1 1021.47163973401 1021.47107496793 61.258 1 -1.7980834205984908 0.43654670189383005 1.0 ['ENSG00000127329|ENST00000334414|PTPRB', 'PTPRB|p.W1340*|1|0.13|ENSG00000127329|chr12:70559383-70559383|C/-|frameshift_variant', 'PTPRB|p.R1326Dfs*26|1|0.22|ENSG00000127329|chr12:70559428-70559428|C/-|frameshift_variant', 'nc|ENSG00000127329|P23467-4|PTPRB', 'nc|ENSG00000127329|P23467-2|PTPRB', 'nc|ENSG00000127329|P23467|PTPRB', 'PTPRB|p.E1160Sfs*17|2|0.15|ENSG00000127329|chr12:70562880-70562880|C/-|frameshift_variant', 'ENST00000552253.1_1_12:70986014-71031175:-|nuORF', 'ENST00000538174.6_1_12:70979073-71031175:-|nuORF'] 29031 13148 FTLGSKLS True PC9_epitope_Rep5 851.47526856247 851.47416993586 55.578 2 -1.7981966676962036 0.4365529567176937 1.0 ['ENSG00000136045|ENST00000412830|PWP1'] 125013 20149 VLNWTVELK True NCI_RA007_Epitope_Rep5 1100.62299542532 1100.62188993586 84.448 2 -1.7985878234442474 0.43657047724750275 1.0 ['ENST00000226299.8_1_4:17609204-17609297:+|nuORF'] 81532 12136 PQVSSPVQEK True PC9_epitope_Rep6 1097.57168812845 1097.5705899358602 58.031 2 -1.7986024828962086 0.43657047724750275 1.0 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-3|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-7|PALM2AKAP2'] 77950 14705 PALAAAAAPAL True PC9_epitope_Rep4 935.5440168286299 935.54290993586 64.497 2 -1.798651888969111 0.43657047724750275 1.0 ['ENSG00000223731|ENST00000686983|SUPT20HL1'] 14993 5927 DYTWEYEYYEI True H1975_Epitope_Rep1 1572.6296564970396 1572.62854993586 27.871 2 -1.7986763961310042 0.43657047724750275 1.0 ['ENSG00000135324|ENST00000257776|MRAP2'] 130933 17486 VVIMFLILG True NCI_RA007_Epitope_Rep5 1003.6140109647499 1003.61290993586 74.049 2 -1.7987071506672394 0.43657047724750275 1.0 ['ENST00000284617.6_1_1:229458648-229458729:-|nuORF'] 805 13797 ACWGNHCS True NCI_RA007_Epitope_Rep5 876.30069241212 876.29958993586 59.746 2 -1.7987335021511497 0.43657047724750275 1.0 ['chr2:113477199-113482177|379|28.75|0.21|7.07|+|0|TE_info:L1PA3,L1PA3_dup1127,L1,LINE,donor,-,113471482,113477199|None,ZNG1B|96'] 3338 12736 AGHGPGVW True NCI_RA007_Epitope_Rep4 779.3714722002701 779.37092496793 56.048 1 -1.7988841604459547 0.43657047724750275 1.0 ['MINDY2|p.D39H|1|0.38|ENSG00000128923|chr15:58771510-58771510|G/C|missense_variant'] 129645 5012 VTHPHLPR True NCI_RA007_Epitope_Rep4 955.53518348043 955.53408993586 25.763 2 -1.7989335783808822 0.43657047724750275 1.0 ['nc|ENSG00000211891|P01854-1|IGHE', 'nc|ENSG00000211891|P01854-3|IGHE', 'nc|ENSG00000211891|P01854|IGHE', 'ENST00000521393.1_1_14:106188133-106188816:-|nuORF'] 121338 4814 VGHRATAL True PC9_epitope_Rep2 823.46643521427 823.46532993586 23.885 2 -1.7991159003476191 0.43657047724750275 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 94243 19992 RWRLPLTCLLL True NCI_RA007_Epitope_Rep4 1382.82204666838 1382.8204049037902 86.455 3 -1.7992997337805179 0.43657047724750275 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 39419 26993 HMAPEIRELLT True PC9_epitope_Rep2 1308.68600668804 1308.68437490379 111.14 3 -1.799375260682834 0.43657047724750275 1.0 ['PWWP2B|p.V577M|1|0.05|ENSG00000171813|chr10:132406229-132406229|G/A|missense_variant'] 89995 26542 RGCCGGCC True H1975_Epitope_Rep3 757.21280600785 757.2122549679301 110.82 1 -1.7994533235974126 0.43657047724750275 1.0 ['nc|ENSG00000284667|A0A286YF46|SCYGR5', 'nc|ENSG00000284629|A0A286YEY9|SCYGR1', 'nc|ENSG00000285843|P0DSO2|SCYGR9', 'nc|ENSG00000284718|A0A286YF01|SCYGR7', 'nc|ENSG00000284704|A0A286YF60|SCYGR3', 'nc|ENSG00000284725|A0A286YF77|SCYGR6', 'nc|ENSG00000284631|A0A286YEV6|SCYGR4', 'nc|ENSG00000284622|A0A286YEX9|SCYGR10', 'nc|ENSG00000284635|A0A286YFG1|SCYGR8', 'nc|ENSG00000284643|A0A286YFB4|SCYGR2'] 59968 10234 LHNDHPYCSP True PC9_epitope_Rep2 1181.49239226193 1181.49128993586 44.7 2 -1.7994927860411543 0.43657047724750275 1.0 ['ENST00000576921.1_1_16:3072866-3073436:-|nuORF', 'nc|ENSG00000103145|Q9NWW0-2|HCFC1R1', 'ENSG00000103145|ENST00000248089|HCFC1R1'] 60639 14341 LITKFLQYESK True NCI_RA007_Epitope_Rep3 1368.7653025545599 1368.76366490379 63.725 3 -1.7995325156396766 0.43657047724750275 1.0 ['ENST00000548422.1_1_12:96676203-96677401:-|nuORF', 'nc|ENSG00000059758|Q00537-2|CDK17', 'ENSG00000059758|ENST00000261211|CDK17'] 39666 9609 HPTARLLL True PC9_epitope_Rep4 919.56033559911 919.55922993586 44.585 2 -1.7995562537255156 0.43657047724750275 1.0 ['nc|ENSG00000137343|Q5SQI0-7|ATAT1', 'nc|ENSG00000137343|Q5SQI0-6|ATAT1', 'nc|ENSG00000137343|Q5SQI0-5|ATAT1', 'nc|ENSG00000137343|Q5SQI0-4|ATAT1', 'nc|ENSG00000137343|Q5SQI0-3|ATAT1', 'ENSG00000137343|ENST00000330083|ATAT1', 'nc|ENSG00000137343|Q5SQI0|ATAT1'] 29498 25978 FVIFMFFLN True H1975_Epitope_Rep3 1176.6041745570399 1176.60253490379 108.21 3 -1.799652075836495 0.43657047724750275 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 26981 19013 FLKTAYPRPA True PC9_epitope_Rep1 1162.6498788795 1162.6482449037899 77.922 3 -1.799682869001643 0.43657047724750275 1.0 ['ENST00000421767.1_1_7:65842866-65843457:-|nuORF'] 33097 6917 GKISREPEPA True PC9_epitope_Rep4 1082.57202248162 1082.57092993586 33.833 2 -1.7999795163760215 0.43659408226232493 1.0 ['ENST00000459799.1_1_1:151140554-151141558:+|nuORF', 'nc|ENSG00000163156|Q9BWG6-2|SCNM1', 'ENSG00000163156|ENST00000368905|SCNM1', 'ENST00000497147.1_1_1:151139275-151141558:+|nuORF'] 80987 22271 PNLEDIYTSLC True PC9_epitope_Rep6 1266.5802042068199 1266.57856490379 98.636 3 -1.8000354118800563 0.43659408226232493 1.0 ['ENSG00000198646|ENST00000359003|NCOA6'] 49143 15408 KGKGLIAA True NCI_RA007_Epitope_Rep2 756.4857736765199 756.48466993586 64.635 2 -1.8001647566450172 0.43659548965639705 1.0 ['ENST00000586783.5_1_19:14000644-14000983:-|nuORF'] 125214 14727 VLQPQRVL True PC9_epitope_Rep2 951.5865503469498 951.58544993586 61.915 2 -1.8002631815012216 0.43659548965639705 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 56344 8883 LDRIDSVL True H1975_Epitope_Rep3 929.51819600361 929.51708993586 39.169 2 -1.800569098703731 0.4366301911082503 1.0 ['ENSG00000166963|ENST00000300231|MAP1A', 'nc|ENSG00000166963|P78559-2|MAP1A'] 41833 17146 IDSSLKSK True NCI_RA007_Epitope_Rep5 876.4916469026 876.49054993586 72.724 2 -1.8005827930094416 0.4366301911082503 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 112810 4806 TPLSAAAHTH True PC9_epitope_Rep6 1004.5039429218 1004.50284993586 25.964 2 -1.8006185889713864 0.4366364433395852 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 55953 18338 LDHVEFKRF True PC9_epitope_Rep4 1189.62439240765 1189.6232899358602 78.605 2 -1.8006337296910913 0.43664269543214806 1.0 ['nc|ENSG00000152270|Q13370-2|PDE3B', 'ENSG00000152270|ENST00000282096|PDE3B'] 63499 23958 LPISGHPT True NCI_RA007_Epitope_Rep5 820.44430278736 820.44320993586 99.531 2 -1.8009367210981193 0.43666004505654266 1.0 ['ENST00000497655.1_1_1:202932056-202932895:-|nuORF'] 22810 5532 EVDVVGNIP True NCI_RA007_Epitope_Rep1 940.4865615221598 940.48546993586 25.587 2 -1.8010157171872887 0.4366662967484186 1.0 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48668655-48668709:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6'] 70454 15035 LYRNPKEWTKK True NCI_RA007_Epitope_Rep2 1461.8092330552097 1461.80812993586 63.168 2 -1.801064650457238 0.43667254830153923 1.0 ['ENSG00000100994|ENST00000216962|PYGB', 'ENST00000471359.1_1_20:25274602-25277155:+|nuORF'] 91394 23587 RNCIPIGE True NCI_RA007_Epitope_Rep5 900.4487365447999 900.44762993586 98.045 2 -1.801220550318694 0.43667395381354523 1.0 ['ENSG00000119965|ENST00000481909|C10orf88'] 55845 13143 LDFAFLWCL True PC9_epitope_Rep3 1126.55213898418 1126.55050490379 55.584 3 -1.8012246015607716 0.43667395381354523 1.0 ['chr3:153927317-153979854|138|13.17|0.05|7.92|-|0|TE_info:L1PB1,L1PB1_dup2586,L1,LINE,donor,+,153979854,153983404|LINC02006,None|44'] 26397 25296 FIKFIFLFG True PC9_epitope_Rep2 1130.65283900162 1130.6517499358602 102.97 2 -1.801354879537079 0.43668020507357347 1.0 ['Tigger1_dup5122|chr6:109273837-109275304:-|1.212453697301262|0.115689182433559|3.39|478.0|79|2|anti-sense'] 70665 14402 MCTSCLTS True NCI_RA007_Epitope_Rep5 844.3128968886 844.31178993586 62.081 2 -1.8017723345570538 0.4366975531265605 1.0 ['ENSG00000110395|ENST00000264033|CBL'] 21158 13116 ERDVVIRLM True PC9_epitope_Rep5 1129.62776353593 1129.62610490379 55.455 3 -1.8019053758259762 0.4367149007945315 1.0 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-3|SMARCAD1'] 122744 8788 VGVELQHI True PC9_epitope_Rep6 893.4970666362099 893.49596993586 43.701 2 -1.8020103704326524 0.4367163052886216 1.0 ['PXDNL|p.A1007V|1|0.26|ENSG00000147485|chr8:51408604-51408604|G/A|missense_variant'] 54550 5843 LAAQEEKFA True PC9_epitope_Rep1 1005.5131106231698 1005.51200993586 27.29 2 -1.802176385669754 0.4367163052886216 1.0 ['ENSG00000137877|ENST00000320955|SPTBN5'] 131203 20786 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 86.068 2 -1.8022549384544573 0.43673365217101834 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 121072 7336 VGFVGFVT True NCI_RA007_Epitope_Rep2 824.4432401581998 824.44214993586 33.158 2 -1.802368454847413 0.4367509986684421 1.0 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 133790 9090 WLRGGLVL True NCI_RA007_Epitope_Rep3 912.5545219426798 912.55342993586 42.843 2 -1.8024277243873414 0.4367594195180402 1.0 ['ENSG00000183034|ENST00000331427|OTOP2'] 137450 15781 YLNNKKTQQRR True PC9_epitope_Rep1 1447.80079362983 1447.7996899358602 65.519 2 -1.80244907669738 0.4367594195180402 1.0 ['ENST00000461502.1_1_13:32999968-33006966:-|nuORF'] 116163 6683 TVTGARVM True PC9_epitope_Rep4 833.4429228883699 833.44182993586 32.888 2 -1.8025073520573733 0.4367594195180402 1.0 ['ENSG00000111319|ENST00000228916|SCNN1A', 'nc|ENSG00000111319|P37088-5|SCNN1A', 'nc|ENSG00000111319|P37088-6|SCNN1A', 'nc|ENSG00000111319|P37088-2|SCNN1A', 'ENST00000366131.6_1_12:6462937-6464599:-|nuORF'] 17733 19255 EHSTFSMA True NCI_RA007_Epitope_Rep5 908.36981751776 908.36872993586 80.93 2 -1.8025381621292036 0.4367594195180402 1.0 ['PGD-NTSR1|1|fusion', 'ENSG00000101188|ENST00000370501|NTSR1'] 106123 7877 SVNPQWNHT True NCI_RA007_Epitope_Rep1 1081.49410651409 1081.49300993586 34.633 2 -1.8027123296231227 0.4367594195180402 1.0 ['ENSG00000147041|ENST00000297875|SYTL5', 'nc|ENSG00000147041|Q8TDW5-2|SYTL5'] 82925 3106 PWKKQHHHYAE True PC9_epitope_Rep1 1459.7109159962704 1459.70926490379 16.769 3 -1.8027159771697379 0.4367594195180402 1.0 ['OXGR1|p.S67Kfs*41|1|0.41|ENSG00000165621|chr13:96987560-96987561|-/T|frameshift_variant'] 122011 20398 VGQGVQAA True PC9_epitope_Rep6 728.3817025307999 728.38115496793 91.16 1 -1.8028469956098272 0.4367594195180402 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 99897 10090 SLHSQPPKTR True NCI_RA007_Epitope_Rep2 1149.6254550368099 1149.6243499358602 43.838 2 -1.8028711288731976 0.4367594195180402 1.0 ['FAM47A|p.K607Nfs*41|2|0.4|ENSG00000185448|chrX:34130458-34130458|T/-|frameshift_variant', 'ENSG00000185448|ENST00000346193|FAM47A'] 62200 24791 LLPPPGHV True PC9_epitope_Rep4 828.4857736765199 828.4852249679301 103.86 1 -1.802929519054822 0.4367594195180402 1.0 ['ENST00000564426.5_1_16:2203418-2203928:+|nuORF'] 7658 13669 ASMSNWNYR True PC9_epitope_Rep5 1127.48182757823 1127.48017490379 57.603 3 -1.8029467674214037 0.4367594195180402 1.0 ['ENST00000518942.1_1_8:52812321-52859098:+|nuORF'] 82269 18536 PTMIRAFPAN True PC9_epitope_Rep1 1116.5749996870798 1116.57390993586 76.088 2 -1.8031076635918282 0.4367594195180402 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 122527 7997 VGSTQPQV True NCI_RA007_Epitope_Rep3 814.41848196234 814.41738993586 38.552 2 -1.8031347443858952 0.4367594195180402 1.0 ['ENSG00000196440|ENST00000423738|ARMCX4'] 70681 7980 MDKDGYFWFVA True NCI_RA007_Epitope_Rep3 1377.60635938501 1377.6052699358602 38.488 2 -1.803226550342789 0.43677676322767467 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 18924 15202 ELERSLYPMEW True H1975_Epitope_Rep1 1451.67550157399 1451.67440993586 63.738 2 -1.8034377477648165 0.4367830119599707 1.0 ['SGMS1|p.Q127L|1|0.4|ENSG00000198964|chr10:50343735-50343735|T/A|missense_variant'] 43831 18513 IKYNFSFRYIY True PC9_epitope_Rep4 1512.7765359446 1512.77542993586 79.283 2 -1.8036553558452268 0.436822543961835 1.0 ['ENSG00000106804|ENST00000223642|C5'] 82031 16837 PSTRPCPG True NCI_RA007_Epitope_Rep1 813.3803226318099 813.3797749679301 69.621 1 -1.8040295595555345 0.43683019370298876 1.0 ['ENST00000467148.1_1_20:62201918-62203710:-|nuORF'] 79721 25480 PHQKLRAK True PC9_epitope_Rep2 976.5930327097199 976.59192993586 103.69 2 -1.8040502190790288 0.43683019370298876 1.0 ['nc|ENSG00000186153|Q9NZC7-7|WWOX'] 54467 22234 LAAARERL True PC9_epitope_Rep1 898.5348491272599 898.53374993586 90.345 2 -1.8040925155700502 0.43683019370298876 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 41744 14830 IDPADTRLV True PC9_epitope_Rep6 998.53965972418 998.53856993586 69.018 2 -1.804251296600546 0.4368475354729917 1.0 ['nc|ENSG00000131844|Q9HCC0-2|MCCC2', 'ENSG00000131844|ENST00000340941|MCCC2'] 29488 25006 FVIFMFFLN True H1975_Epitope_Rep1 1176.6041745570399 1176.60253490379 103.56 3 -1.8045163414833807 0.43687597071222545 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 165 14151 AADRYITI True PC9_epitope_Rep3 921.4919812557699 921.49088993586 59.515 2 -1.8045999649997069 0.4368822178586881 1.0 ['ENSG00000185231|ENST00000327606|MC2R'] 29917 5301 FWLLKIRDYF True PC9_epitope_Rep1 1399.7652429849097 1399.76359490379 25.231 3 -1.8048204729604633 0.43688297282307265 1.0 ['ENST00000361121.6_1_13:45603401-45603617:+|nuORF'] 61454 17519 LLFDPRTL True PC9_epitope_Rep4 973.55966689277 973.55856993586 75.39 2 -1.8048527355444661 0.43688297282307265 1.0 ['ENST00000520633.1_1_8:67922943-67940757:-|nuORF', 'ENST00000519919.5_1_8:67922943-67926728:-|nuORF', 'ENST00000521040.5_1_8:67876548-67926755:-|nuORF', 'nc|ENSG00000178125|Q7Z4L9-2|PPP1R42', 'ENSG00000178125|ENST00000685739|PPP1R42', 'nc|ENSG00000178125|Q7Z4L9|PPP1R42'] 98316 7306 SIGGIHED True PC9_epitope_Rep4 826.38209645362 826.38098993586 35.432 2 -1.8049027186394653 0.43688297282307265 1.0 ['nc|ENSG00000106799|P36897-3|TGFBR1', 'ENSG00000106799|ENST00000374994|TGFBR1', 'nc|ENSG00000106799|P36897-2|TGFBR1'] 33620 8481 GLLSPERAV True PC9_epitope_Rep2 940.5341804209199 940.53308993586 37.989 2 -1.8049192173766007 0.43688297282307265 1.0 ['ENST00000316509.10_2_17:8062733-8062859:-|nuORF'] 60580 6373 LIRSHNLEVP True H1975_Epitope_Rep1 1176.66150619236 1176.6604099358601 29.575 2 -1.8050333685861706 0.43688297282307265 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'nc|ENSG00000067798|Q8IVL0-3|NAV3'] 15 8636 AAAAAAGF True NCI_RA007_Epitope_Rep2 648.3231250255201 648.3225749679301 38.237 1 -1.8050756356787403 0.43688297282307265 1.0 ['nc|ENSG00000133124|O14654|IRS4', 'ENSG00000133124|ENST00000372129|IRS4', 'ENSG00000253352|ENST00000644773|TUG1', 'IRX2|p.A215Qfs*69|1|0.3|ENSG00000170561|chr5:2749394-2749394|C/-|frameshift_variant', 'ENSG00000170561|ENST00000302057|IRX2'] 425 8654 AALPPRPPA True NCI_RA007_Epitope_Rep4 888.51813643396 888.51702993586 40.071 2 -1.805097786476973 0.43688297282307265 1.0 ['ENST00000284617.6_1_1:229462728-229478156:-|nuORF', 'ENST00000483092.1_1_1:229463235-229478156:-|nuORF'] 52408 23556 KPGPLRRAH True PC9_epitope_Rep1 1030.6148307834599 1030.6137299358602 95.399 2 -1.8051012802517286 0.43688297282307265 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 91473 24833 RNRRHFERRL True PC9_epitope_Rep2 1438.8130300793798 1438.81192993586 101.21 2 -1.8051107293662259 0.43688297282307265 1.0 ['ENST00000475627.1_1_6:32918275-32920806:-|nuORF'] 30044 25206 FYKKKYRVGNS True PC9_epitope_Rep1 1388.7564692063597 1388.75536993586 101.84 2 -1.8052683262030595 0.4368892191988996 1.0 ['ENST00000256497.8_1_3:5261359-5261473:+|nuORF'] 48152 18206 KARGAPRG True NCI_RA007_Epitope_Rep2 811.4776686043099 811.47656993586 75.575 2 -1.8054991007492982 0.43689826522915837 1.0 ['ENSG00000137501|ENST00000359152|SYTL2', 'nc|ENSG00000137501|Q9HCH5-15|SYTL2', 'nc|ENSG00000137501|Q9HCH5-14|SYTL2', 'nc|ENSG00000137501|Q9HCH5-6|SYTL2', 'nc|ENSG00000137501|Q9HCH5|SYTL2', 'nc|ENSG00000137501|Q9HCH5-13|SYTL2', 'ENST00000438197.2_1_11:85444955-85468786:-|nuORF'] 92444 18721 RQVEKRREKKE True NCI_RA007_Epitope_Rep4 1484.8535574786795 1484.85190490379 80.995 3 -1.8055428292467381 0.43689826522915837 1.0 ['ENSG00000261649|ENST00000567390|GOLGA6L7'] 97528 3514 SGSWPEMF True PC9_epitope_Rep2 939.3796539254699 939.37854993586 18.796 2 -1.8055937553862595 0.43689826522915837 1.0 ['ENST00000376236.8_1_10:26800727-26800796:+|nuORF'] 128749 12022 VSPTIKLRLS True PC9_epitope_Rep4 1112.69174369148 1112.6906499358602 54.043 2 -1.8055987611737336 0.43689826522915837 1.0 ['TTN|p.P17962S|1|0.19|ENSG00000155657|chr2:178593401-178593401|G/A|missense_variant'] 90770 26120 RKRLLFYIVL True NCI_RA007_Epitope_Rep2 1319.84416201195 1319.84251490379 110.9 3 -1.8056235145199553 0.43689826522915837 1.0 ['ENST00000348165.9_1_7:156931958-156961760:+|nuORF'] 36255 5325 GVGGRWTRWRR True H1975_Epitope_Rep1 1385.75411822093 1385.75302993586 25.546 2 -1.8056561852053967 0.4368996650324985 1.0 ['ENST00000229329.6_1_12:22199202-22199379:+|nuORF'] 74868 13265 NLQQRQFLPLQ True H1975_Epitope_Rep3 1383.76228286279 1383.76118993586 56.282 2 -1.8056986274741231 0.4368996650324985 1.0 ['ENST00000555988.1_2_14:75356010-75360059:+|nuORF'] 124001 16959 VKKTTEAT True H1975_Epitope_Rep2 876.4916469026 876.49054993586 70.478 2 -1.8057269726414125 0.4369010647737356 1.0 ['ENST00000537556.1_1_12:64238596-64474299:+|nuORF', 'SRGAP1|p.Y944*|1|0.22|ENSG00000196935|chr12:64128147-64128160|CAATACACGGGCTT/-|frameshift_variant', 'nc|ENSG00000196935|Q7Z6B7-2|SRGAP1', 'ENSG00000196935|ENST00000355086|SRGAP1'] 48083 25120 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 104.01 3 -1.8058031834072656 0.4369010647737356 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 126404 15432 VPLKKAKESK True NCI_RA007_Epitope_Rep4 1126.70739375562 1126.70628993586 67.028 2 -1.805876071301837 0.4369087097811741 1.0 ['ENSG00000091986|ENST00000206423|CCDC80', 'nc|ENSG00000091986|Q76M96-2|CCDC80'] 63238 7166 LPADDFDIY True PC9_epitope_Rep6 1067.4811417885498 1067.48004993586 36.643 2 -1.8059327364202276 0.4369087097811741 1.0 ['ENSG00000170236|ENST00000532404|USP50', 'nc|ENSG00000170236|Q70EL3|USP50'] 14465 24475 DTRRWKKKQ True PC9_epitope_Rep5 1244.7101877202797 1244.7090899358602 99.218 2 -1.8060164016970965 0.4369087097811741 1.0 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1'] 120050 24193 VFFDVLGLF True PC9_epitope_Rep5 1055.56916894731 1055.5680699358602 98.052 2 -1.8063914074460443 0.43692259917708254 1.0 ['ENSG00000099219|ENST00000339450|ERMP1', 'nc|ENSG00000099219|Q7Z2K6-2|ERMP1'] 111093 21962 TLEEKRKMT True NCI_RA007_Epitope_Rep3 1134.60669373818 1134.60505490379 95.423 3 -1.8066419984360802 0.43692259917708254 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 73632 24711 NGHYTEPYASS True H1975_Epitope_Rep1 1224.50473076744 1224.50308490379 102.37 3 -1.8066859031539617 0.43692259917708254 1.0 ['ENST00000554270.5_1_14:88936247-89016761:-|nuORF', 'ENSG00000070778|ENST00000556564|PTPN21'] 10751 24412 CYCEDGFE True H1975_Epitope_Rep3 964.2942696189998 964.29316993586 101.63 2 -1.8067086732849529 0.43692259917708254 1.0 ['ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.R3361Lfs*17|1|0.24|ENSG00000168702|chr2:140444655-140444656|-/A|frameshift_variant', 'LRP1B|p.P3359Qfs*54|1|0.29|ENSG00000168702|chr2:140444661-140444661|G/-|frameshift_variant', 'LRP1B|p.P3292Lfs*121|1|0.15|ENSG00000168702|chr2:140456543-140456543|G/-|frameshift_variant', 'LRP1B|p.C2689Ffs*8|1|0.18|ENSG00000168702|chr2:140516972-140516972|C/-|frameshift_variant', 'LRP1B|p.R2777Dfs*83|1|0.22|ENSG00000168702|chr2:140509997-140509997|G/-|frameshift_variant', 'LRP1B|p.E566Ifs*12|2|0.45|ENSG00000168702|chr2:141049073-141049079|TGGTTTC/-|frameshift_variant', 'LRP1B|p.K791Nfs*10|1|0.27|ENSG00000168702|chr2:141013563-141013563|C/-|frameshift_variant', 'LRP1B|p.D995Tfs*184|1|0.45|ENSG00000168702|chr2:140950388-140950388|C/-|frameshift_variant'] 24620 22755 FAQGQKNRVK True PC9_epitope_Rep6 1174.6570895182601 1174.6559899358601 100.61 2 -1.8068135782640742 0.43692334989354153 1.0 ['PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1'] 131529 12471 VVVGRALL True NCI_RA007_Epitope_Rep5 825.5436229058099 825.54252993586 54.628 2 -1.8068537598354661 0.43692334989354153 1.0 ['ENSG00000170382|ENST00000367177|LRRN2'] 30886 17490 GARRAHRSV True NCI_RA007_Epitope_Rep5 1008.5689432201999 1008.56837496793 74.066 1 -1.806988571133976 0.43692334989354153 1.0 ['ENST00000487162.1_1_22:50967153-50967951:-|nuORF'] 15450 4693 EAPAESRDP True NCI_RA007_Epitope_Rep2 970.4355885784599 970.43448993586 22.881 2 -1.806989452901137 0.43692334989354153 1.0 ['ENSG00000244486|ENST00000622235|SCARF2', 'nc|ENSG00000244486|Q96GP6|SCARF2'] 119558 9199 VERFRYGW True PC9_epitope_Rep4 1111.5563128478298 1111.5552099358601 42.981 2 -1.8070677881562731 0.43692334989354153 1.0 ['nc|ENSG00000167525|Q8NCQ7-2|PROCA1', 'nc|ENSG00000167525|Q8NCQ7|PROCA1', 'ENSG00000167525|ENST00000682792|PROCA1', 'nc|ENSG00000167525|Q8NCQ7-3|PROCA1'] 100317 2852 SLMELWSLM True NCI_RA007_Epitope_Rep1 1108.52968928744 1108.52858993586 14.917 2 -1.8071050374272946 0.43692334989354153 1.0 ['nc|ENSG00000080603|Q6ZRS2-3|SRCAP', 'nc|ENSG00000080603|Q6ZRS2-2|SRCAP', 'ENSG00000080603|ENST00000262518|SRCAP', 'SRCAP|p.P2473Qfs*2|1|0.38|ENSG00000080603|chr16:30737457-30737457|C/-|frameshift_variant', 'SRCAP|p.E2666Sfs*12|1|0.45|ENSG00000080603|chr16:30738035-30738035|G/-|frameshift_variant'] 78678 16646 PEDCGQPGS True H1975_Epitope_Rep2 888.3283466286 888.32724993586 69.259 2 -1.807163325932708 0.43692334989354153 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 111824 6132 TLRHHDLHSWH True NCI_RA007_Epitope_Rep4 1437.7014139417302 1437.69976490379 30.199 3 -1.8071758671114668 0.43692334989354153 1.0 ['nc|ENSG00000070413|P98153-3|DGCR2', 'nc|ENSG00000070413|P98153-2|DGCR2', 'ENSG00000070413|ENST00000263196|DGCR2'] 73641 22472 NGIYRKLM True PC9_epitope_Rep6 993.5429712828098 993.54186993586 99.434 2 -1.8072732755823628 0.43692334989354153 1.0 ['ENSG00000135776|ENST00000344517|ABCB10'] 82208 12712 PTGTQLKE True PC9_epitope_Rep4 872.46034677432 872.45924993586 56.751 2 -1.807597725622338 0.4369317425821617 1.0 ['ENST00000521141.1_1_8:22613398-22614593:+|nuORF'] 97734 12678 SHGCAPTT True NCI_RA007_Epitope_Rep5 772.3173880220801 772.31628993586 55.424 2 -1.8076334759805104 0.4369317425821617 1.0 ['nc|ENSG00000185988|Q496M5-2|PLK5', 'ENSG00000185988|ENST00000454744|PLK5'] 107727 6331 TALLVIIIII True PC9_epitope_Rep2 1080.75221868972 1080.75112993586 29.75 2 -1.8077160696537666 0.4369317425821617 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 515 21457 AAPLPYSS True PC9_epitope_Rep2 804.4017692690401 804.40066993586 88.007 2 -1.8078330523545598 0.4369317425821617 1.0 ['ENST00000261799.8_1_5:149535034-149535298:-|nuORF'] 97862 14204 SHKTKYTL True PC9_epitope_Rep3 976.53418042092 976.53308993586 59.722 2 -1.8078700684890205 0.4369317425821617 1.0 ['L1MC1_dup2137|chr3:11202598-11203364:-|1.2042192408896564|0.3234029913481031|1.9|502.0|17|3|sense'] 34034 21632 GNLLRQPVSA True PC9_epitope_Rep6 1053.59309227937 1053.59198993586 96.093 2 -1.8079477953966052 0.4369317425821617 1.0 ['nc|ENSG00000149499|Q32P44-3|EML3'] 33768 3145 GLSPYERK True NCI_RA007_Epitope_Rep2 948.5028802926399 948.50178993586 16.87 2 -1.8080107341227312 0.4369317425821617 1.0 ['ENSG00000092470|ENST00000263795|WDR76', 'WDR76|p.L377Vfs*5|1|0.11|ENSG00000092470|chr15:43851183-43851184|CT/-|frameshift_variant'] 106375 6824 SVSREFSL True PC9_epitope_Rep2 923.47124581119 923.47014993586 31.654 2 -1.8081336699520796 0.4369317425821617 1.0 ['ENSG00000171811|ENST00000368586|CFAP46'] 48129 25080 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 104.33 3 -1.8081398431102524 0.4369317425821617 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 58720 25198 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 108.9 2 -1.8081759137210642 0.4369317425821617 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 115785 24842 TVLVHLEIKVL True NCI_RA007_Epitope_Rep1 1262.79620876002 1262.7951099358602 102.83 2 -1.8082098268607625 0.4369317425821617 1.0 ['nc|ENSG00000130005|Q14353-2|GAMT'] 56058 22556 LDLCHTTS True NCI_RA007_Epitope_Rep2 888.4011176460401 888.40002993586 93.818 2 -1.8083172153874096 0.4369317425821617 1.0 ['nc|ENSG00000204700|O76002|OR2J2'] 7249 24623 ARKQHRHSIA True PC9_epitope_Rep4 1202.6744709179 1202.6733699358601 103.2 2 -1.8083352256373497 0.4369379857854062 1.0 ['ENST00000423517.6_1_7:82450377-82450656:-|nuORF'] 26122 21226 FHGGLYDP True NCI_RA007_Epitope_Rep5 904.4079172786398 904.40682993586 88.683 2 -1.8084253745571333 0.4369442288502051 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 134992 25108 YAGFHVAL True PC9_epitope_Rep3 876.4493881678 876.44828993586 101.93 2 -1.8085823547355695 0.4369615593573638 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 60123 15505 LHVKTKMV True PC9_epitope_Rep5 954.56845775466 954.56736993586 64.649 2 -1.808661625886892 0.4369629572139745 1.0 ['ENST00000509440.5_1_3:129579804-129599355:-|nuORF'] 15709 9554 EDAERREREER True NCI_RA007_Epitope_Rep1 1473.6920310264902 1473.6909299358601 41.16 2 -1.80872998366678 0.4369629572139745 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 76977 13972 NVRFSTIVRRR True NCI_RA007_Epitope_Rep2 1402.8269488080198 1402.82584993586 59.005 2 -1.808837464140946 0.4369691997250371 1.0 ['ENSG00000120129|ENST00000239223|DUSP1'] 44154 21357 ILPSLRPEL True PC9_epitope_Rep2 1036.62808080576 1036.6269899358601 87.618 2 -1.8089847335909677 0.43697544209767725 1.0 ['nc|ENSG00000021574|Q9UBP0-3|SPAST', 'ENSG00000021574|ENST00000315285|SPAST', 'nc|ENSG00000021574|Q9UBP0-4|SPAST', 'nc|ENSG00000021574|Q9UBP0-2|SPAST'] 22603 14176 ETPRLQYL True PC9_epitope_Rep5 1018.54474510462 1018.54364993586 59.538 2 -1.8092646772511947 0.436992771298062 1.0 ['ENSG00000105737|ENST00000593562|GRIK5', 'nc|ENSG00000105737|Q16478-2|GRIK5'] 71812 18690 MNVRILRRHL True NCI_RA007_Epitope_Rep3 1306.77682781146 1306.7751749037902 81.749 3 -1.8096026063496546 0.4370052551054347 1.0 ['ENST00000430298.6_1_19:12222347-12224207:+|nuORF'] 110660 9404 TIVSSKKIT True PC9_epitope_Rep2 975.59644632431 975.59534993586 41.511 2 -1.8096340979549563 0.4370052551054347 1.0 ['ENSG00000140848|ENST00000290776|CPNE2', 'CPNE2|p.E517Dfs*21|1|0.22|ENSG00000140848|chr16:57147559-57147560|AG/-|frameshift_variant', 'nc|ENSG00000140848|Q96FN4-2|CPNE2'] 112764 21486 TPKRRRLWR True PC9_epitope_Rep6 1267.7737910363498 1267.7721449037901 95.519 3 -1.8098270985700502 0.43701289342690214 1.0 ['ENST00000356840.7_1_6:16129383-16129569:+|nuORF'] 92678 23271 RRGRGRPPQK True PC9_epitope_Rep5 1206.71700443622 1206.71590993586 94.498 2 -1.8098330463819687 0.43701289342690214 1.0 ['ENSG00000186280|ENST00000335080|KDM4D'] 90292 20295 RHSRRRVLQ True NCI_RA007_Epitope_Rep5 1206.71700443622 1206.71536490379 85.005 3 -1.809853992558779 0.43701289342690214 1.0 ['ENSG00000169548|ENST00000302097|ZNF280A'] 79775 21197 PHVSRARG True H1975_Epitope_Rep2 878.48348226074 878.4823899358599 87.73 2 -1.8099565539762283 0.4370413072880867 1.0 ['ENST00000230859.7_2_5:6755057-6755249:+|nuORF'] 137750 13621 YNLYIVENPHY True PC9_epitope_Rep1 1423.6772158261501 1423.67610993586 57.25 2 -1.810040342482308 0.4370697205192732 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12', 'nc|ENSG00000174844|Q6ZR08-2|DNAH12', 'nc|ENSG00000174844|Q6ZR08-3|DNAH12'] 116625 16484 TYHMWWVCFWH True H1975_Epitope_Rep3 1594.66383177482 1594.6627299358602 68.897 2 -1.8104564256271207 0.4370995277475999 1.0 ['ENST00000523237.1_1_8:1721944-1728730:+|nuORF', 'ENSG00000182372|ENST00000331222|CLN8'] 78714 15486 PEEQLPKT True PC9_epitope_Rep1 940.48656152216 940.48601496793 64.389 1 -1.8105231296484494 0.4370995277475999 1.0 ['ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-5|DENND1A'] 45832 13037 ISPVESDSSVR True PC9_epitope_Rep1 1174.5829810881398 1174.58188993586 55.016 2 -1.8106603255953722 0.4370995277475999 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 29491 25615 FVIFMFFLN True H1975_Epitope_Rep2 1176.6041745570399 1176.60253490379 105.16 3 -1.8108080857421318 0.4371383598997938 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 88817 21936 RDSSKREGLLA True PC9_epitope_Rep6 1230.66804812478 1230.6669499358602 97.284 2 -1.8110148098384216 0.4371383598997938 1.0 ['nc|ENSG00000130479|Q66K74-2|MAP1S', 'ENSG00000130479|ENST00000324096|MAP1S'] 92616 23970 RRERELREA True PC9_epitope_Rep4 1213.6639658038498 1213.66286993586 100.67 2 -1.8110302683727497 0.4371383598997938 1.0 ['nc|ENSG00000136279|Q9UJU6-6|DBNL', 'ENSG00000136279|ENST00000448521|DBNL', 'nc|ENSG00000136279|Q9UJU6-2|DBNL', 'nc|ENSG00000136279|Q9UJU6-3|DBNL', 'ENST00000449997.1_1_7:44097442-44098349:+|nuORF', 'nc|ENSG00000136279|Q9UJU6-5|DBNL', 'nc|ENSG00000136279|Q9UJU6-4|DBNL'] 36589 16833 GVLGWGAP True PC9_epitope_Rep5 755.3966243189499 755.3955299358599 69.757 2 -1.8110650708918559 0.4371383598997938 1.0 ['ENSG00000159618|ENST00000349457|ADGRG5'] 78290 7436 PASDLDYR True NCI_RA007_Epitope_Rep5 935.43486030247 935.43376993586 35.28 2 -1.8110716777191116 0.4371383598997938 1.0 ['NRAP|p.L646P|1|0.22|ENSG00000197893|chr10:113629691-113629691|A/G|missense_variant'] 114071 2270 TRPPTTFPMDK True NCI_RA007_Epitope_Rep4 1289.64380752289 1289.64217490379 12.769 3 -1.8111635793445855 0.4371383598997938 1.0 ['ENSG00000172188|ENST00000641580|OR4C11'] 100777 23231 SLRQQLRER True PC9_epitope_Rep1 1184.6738022115599 1184.6727099358602 94.154 2 -1.81117116598064 0.4371383598997938 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 76209 19635 NRWRRSKRA True NCI_RA007_Epitope_Rep1 1228.7013543720798 1228.69969490379 80.565 3 -1.8112478794274278 0.4371383598997938 1.0 ['ENSG00000147655|ENST00000276659|RSPO2'] 53977 9012 KYKSSLLNRY True H1975_Epitope_Rep3 1270.70337100434 1270.7022699358602 39.66 2 -1.811306601604085 0.43713975348053563 1.0 ['ENSG00000150051|ENST00000419761|MKX'] 57492 12499 LEKLLPRIWEN True NCI_RA007_Epitope_Rep1 1409.80308504561 1409.80198993586 52.597 2 -1.811358535311281 0.43713975348053563 1.0 ['ENST00000496593.5_1_11:61404148-61405105:+|nuORF'] 4214 17140 AIDSREDPV True PC9_epitope_Rep5 1000.48253877088 1000.48144993586 70.95 2 -1.811433209392049 0.43715223126205416 1.0 ['ENSG00000105141|ENST00000427043|CASP14'] 131206 21459 VVPLAGTD True H1975_Epitope_Rep2 770.4174193331801 770.41632993586 88.787 2 -1.8115481099816249 0.43715223126205416 1.0 ['ENSG00000109107|ENST00000226253|ALDOC'] 122724 12189 VGVAGKFV True PC9_epitope_Rep3 775.4592245755099 775.45812993586 51.918 2 -1.8118597577089746 0.4371647084903569 1.0 ['ENSG00000136381|ENST00000258886|IREB2'] 42416 20475 IEPYLKKKD True PC9_epitope_Rep4 1132.6492101731599 1132.64810993586 86.904 2 -1.811905449827113 0.4371647084903569 1.0 ['ENST00000475506.1_1_1:17354162-17371284:-|nuORF', 'ENSG00000117118|ENST00000375499|SDHB'] 27081 9536 FLPPAPAA True PC9_epitope_Rep3 782.4326754744999 782.43156993586 41.626 2 -1.8121527404772664 0.4371771851654807 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 124237 17116 VLAWGVWR True NCI_RA007_Epitope_Rep5 985.5497709154099 985.54866993586 72.609 2 -1.8121775444025892 0.4371771851654807 1.0 ['ENSG00000155189|ENST00000285518|AGPAT5', 'AGPAT5|p.T229Rfs*19|1|0.39|ENSG00000155189|chr8:6747769-6747769|C/-|frameshift_variant', 'ENST00000518327.1_1_8:6566222-6612655:+|nuORF'] 69610 3632 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 18.381 3 -1.812227211903665 0.437183423295612 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 120077 22568 VFGKLGRS True H1975_Epitope_Rep3 862.5024863698198 862.50138993586 94.327 2 -1.8124567761826202 0.4372007448129101 1.0 ['PLXNB2|p.H1430Afs*27|1|0.15|ENSG00000196576|chr22:50279729-50279731|ATG/C|frameshift_variant', 'ENSG00000196576|ENST00000359337|PLXNB2'] 19826 9181 ELTTDYDEK True H1975_Epitope_Rep2 1112.4873493677999 1112.48624993586 40.269 2 -1.8127269414639235 0.4372146118721461 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 29567 24801 FVIFMFFLN True PC9_epitope_Rep6 1176.6041745570399 1176.60253490379 110.1 3 -1.812739690015071 0.4372146118721461 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 28141 18649 FRKKKREQ True NCI_RA007_Epitope_Rep4 1118.6672602791398 1118.6661699358601 80.67 2 -1.8127741741278018 0.4372146118721461 1.0 ['ENST00000082468.11_1_6:26405791-26410201:+|nuORF', 'nc|ENSG00000026950|O00481-2|BTN3A1', 'nc|ENSG00000026950|O00481-3|BTN3A1', 'nc|ENSG00000026950|O00481-4|BTN3A1', 'ENSG00000026950|ENST00000289361|BTN3A1'] 38303 18024 HFPEVMLG True PC9_epitope_Rep5 928.4476739156399 928.44656993586 74.346 2 -1.8127790908521162 0.4372146118721461 1.0 ['ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF', 'nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3', 'ENST00000504496.5_1_5:136997591-137028142:-|nuORF', 'ENST00000504208.5_1_5:136964069-137033992:-|nuORF'] 26937 19557 FLHLLMKLPL True H1975_Epitope_Rep3 1223.74642211663 1223.7453299358601 81.944 2 -1.813128140626233 0.43727626372895634 1.0 ['ENST00000342435.8_1_3:146233569-146233638:-|nuORF'] 74014 25491 NHRLQKIL True PC9_epitope_Rep1 1020.6192474575599 1020.61867496793 103.04 1 -1.8134285401694388 0.43732198468375616 1.0 ['ENST00000530529.5_1_11:108357029-108357155:-|nuORF'] 52511 20232 KPPGTRKLHN True NCI_RA007_Epitope_Rep4 1146.6621748987 1146.66052490379 87.545 3 -1.813430786332752 0.43732198468375616 1.0 ['nc|ENSG00000157540|Q13627-4|DYRK1A', 'nc|ENSG00000157540|Q13627-3|DYRK1A', 'nc|ENSG00000157540|Q13627-5|DYRK1A', 'ENSG00000157540|ENST00000647188|DYRK1A', 'nc|ENSG00000157540|Q13627|DYRK1A'] 60909 15360 LKTQSGKR True NCI_RA007_Epitope_Rep5 916.5454138109599 916.54430993586 65.788 2 -1.8134979396717177 0.43732337393193177 1.0 ['ENST00000473648.1_1_3:119209263-119211282:+|nuORF'] 77765 19525 PAATILPKG True PC9_epitope_Rep2 866.5225531080599 866.52200496793 80.487 1 -1.813511264772266 0.43732337393193177 1.0 ['ENSG00000079432|ENST00000681038|CIC', 'nc|ENSG00000079432|Q96RK0-2|CIC'] 119610 19957 VERWQWIFFFH True H1975_Epitope_Rep3 1593.7881036878098 1593.7870099358602 83.524 2 -1.8137783083757242 0.4373753269205195 1.0 ['ENST00000512845.5_1_4:121737455-121843799:-|nuORF'] 42734 5549 IFDMKKWDQFY True PC9_epitope_Rep3 1519.71697246315 1519.7153249037901 26.423 3 -1.8138094716275595 0.4373753269205195 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7', 'UGT2B10|p.N227D|2|0.16|ENSG00000109181|chr4:68816698-68816698|A/G|missense_variant', 'nc|ENSG00000156096|P06133-3|UGT2B4', 'nc|ENSG00000156096|P06133-2|UGT2B4', 'ENSG00000156096|ENST00000305107|UGT2B4'] 80933 17984 PMPFPYPLPQP True NCI_RA007_Epitope_Rep4 1282.64201661774 1282.64090993586 77.816 2 -1.8138875198832098 0.4373753269205195 1.0 ['nc|ENSG00000132635|Q9H1Q7-2|PCED1A', 'ENSG00000132635|ENST00000360652|PCED1A'] 54528 16459 LAAGRTRK True NCI_RA007_Epitope_Rep4 871.53518348043 871.53408993586 71.347 2 -1.8140024248384958 0.4373877967153527 1.0 ['ENSG00000162624|ENST00000356261|LHX8', 'nc|ENSG00000162624|Q68G74|LHX8'] 137033 19141 YKRIYVKFIEN True PC9_epitope_Rep5 1471.8187351097497 1471.8170849037901 78.66 3 -1.81408252569564 0.4373877967153527 1.0 ['ENSG00000060749|ENST00000650167|QSER1', 'nc|ENSG00000060749|Q2KHR3|QSER1', 'nc|ENSG00000060749|Q2KHR3-2|QSER1'] 37584 11195 GYSEIDTWSL True PC9_epitope_Rep2 1169.52406922969 1169.5229699358601 48.386 2 -1.8142630635022232 0.4374051130885759 1.0 ['ENST00000413990.1_1_1:158146374-158146917:-|nuORF'] 61041 18306 LLARLRHLRS True NCI_RA007_Epitope_Rep2 1233.77820771045 1233.7771099358602 75.964 2 -1.8142758788840614 0.4374113475177305 1.0 ['nc|ENSG00000155034|Q96ME1-5|FBXL18', 'nc|ENSG00000155034|Q96ME1-1|FBXL18', 'nc|ENSG00000155034|Q96ME1-2|FBXL18', 'ENSG00000155034|ENST00000382368|FBXL18'] 7680 12523 ASPGFNRT True PC9_epitope_Rep3 848.41406528824 848.41296993586 53.194 2 -1.8143314832209594 0.4374127346468385 1.0 ['ENST00000282185.7_1_5:81549233-81550063:+|nuORF'] 54468 22160 LAAARERL True PC9_epitope_Rep5 898.5348491272599 898.53374993586 90.276 2 -1.8143656371504613 0.4374127346468385 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 137961 25126 YPVPIVLI True PC9_epitope_Rep1 912.56844067132 912.56734993586 101.53 2 -1.814453479297616 0.43742520278356456 1.0 ['OR11H6|p.M299Nfs*11|1|0.15|ENSG00000176219|chr14:20224602-20224603|-/A|frameshift_variant', 'ENSG00000176219|ENST00000315519|OR11H6'] 29431 10824 FVGLVQRKI True NCI_RA007_Epitope_Rep4 1058.66004964038 1058.6589499358602 48.483 2 -1.8145132329412812 0.43742520278356456 1.0 ['ENST00000505514.5_1_4:76419354-76434388:-|nuORF'] 90680 24818 RKLLERLPE True H1975_Epitope_Rep1 1152.69789170108 1152.6967899358601 102.78 2 -1.8147620201669825 0.4374535985373151 1.0 ['ENSG00000009413|ENST00000368802|REV3L', 'nc|ENSG00000009413|O60673-2|REV3L'] 881 11069 ADLRAHRRT True H1975_Epitope_Rep1 1094.6057226517398 1094.6046299358602 47.54 2 -1.8149260050640648 0.43745983201471533 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 66807 4717 LSVPEAARTEA True NCI_RA007_Epitope_Rep2 1142.59315184902 1142.5920499358601 22.976 2 -1.8149690376332146 0.4374722985550926 1.0 ['ENSG00000173546|ENST00000308508|CSPG4'] 38461 17112 HGVSHVVP True NCI_RA007_Epitope_Rep5 830.43988611326 830.43878993586 72.592 2 -1.815001710521511 0.4374722985550926 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 28979 22424 FTGYISSY True PC9_epitope_Rep4 936.4228986364399 936.42180993586 94.485 2 -1.8151340017101094 0.4374847645429363 1.0 ['NALCN|p.S449Y|1|0.38|ENSG00000102452|chr13:101237843-101237843|G/T|missense_variant'] 18317 19306 EITWEKQLEDR True H1975_Epitope_Rep1 1445.7150578868498 1445.7139699358602 80.43 2 -1.8151370942934115 0.4374847645429363 1.0 ['ENSG00000173714|ENST00000311378|WFIKKN2'] 110118 13424 TIAQEPKN True PC9_epitope_Rep5 899.4712458111899 899.47014993586 56.651 2 -1.8152783374400236 0.43749722997828305 1.0 ['ENSG00000179300|ENST00000321110|RTL3'] 38277 21860 HFGFILLM True PC9_epitope_Rep6 976.52044493308 976.51934993586 96.986 2 -1.8153614925547672 0.43749722997828305 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 119601 23568 VERRRSGR True PC9_epitope_Rep5 1014.5795079038999 1014.5789749679301 95.639 1 -1.8156340388643621 0.4375470861954354 1.0 ['ENST00000264010.8_1_16:67596501-67605146:+|nuORF'] 73456 4818 NEVDLLGPNQ True NCI_RA007_Epitope_Rep2 1097.53530261973 1097.5342099358602 23.366 2 -1.8156681575534872 0.4375470861954354 1.0 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1'] 111766 22479 TLQNGAAV True PC9_epitope_Rep5 772.4079172786398 772.4073649679301 91.467 1 -1.8157261777698364 0.4375470861954354 1.0 ['ENST00000575531.5_1_16:4407102-4412712:-|nuORF', 'ENST00000575714.5_1_16:4408319-4455566:-|nuORF', 'nc|ENSG00000262246|P57737-2|CORO7', 'nc|ENSG00000262246|P57737-4|CORO7', 'ENSG00000262246|ENST00000251166|CORO7', 'nc|ENSG00000262246|P57737-3|CORO7'] 82591 21793 PVIITRNSH True PC9_epitope_Rep1 1035.5825275956702 1035.5814299358601 88.647 2 -1.8157985746652772 0.4375470861954354 1.0 ['FRS3|p.P327Hfs*64|1|0.27|ENSG00000137218|chr6:41771118-41771118|G/-|frameshift_variant', 'ENSG00000137218|ENST00000373018|FRS3', 'FRS3|p.R204Qfs*11|1|0.1|ENSG00000137218|chr6:41771489-41771490|-/T|frameshift_variant', 'FRS3|p.Q135Sfs*6|1|0.17|ENSG00000137218|chr6:41772810-41772810|G/-|frameshift_variant'] 122896 14891 VGVRLQRPL True NCI_RA007_Epitope_Rep5 1036.6505475858398 1036.64997496793 63.947 1 -1.8157999782282415 0.4375470861954354 1.0 ['ENST00000482665.1_1_16:334415-335240:+|nuORF'] 101486 4843 SNRYYFTVQS True H1975_Epitope_Rep3 1263.5884008217502 1263.58730993586 23.754 2 -1.8158026325858743 0.4375470861954354 1.0 ['ENSG00000166669|ENST00000562102|ATF7IP2'] 38449 21570 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 89.242 2 -1.8158563352886852 0.4375470861954354 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 87187 17489 QSLGHRRR True NCI_RA007_Epitope_Rep5 1008.5689432202 1008.56784993586 74.062 2 -1.8158994168948006 0.4375470861954354 1.0 ['ENST00000283921.4_1_7:27211779-27213458:-|nuORF'] 128245 14573 VRWFGDSRYAL True H1975_Epitope_Rep2 1368.6938689498 1368.69276993586 61.211 2 -1.816133668810046 0.4375609323761411 1.0 ['ENSG00000174306|ENST00000683867|ZHX3', 'nc|ENSG00000174306|Q9H4I2-2|ZHX3'] 48100 1901 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 10.204 3 -1.8161411867740065 0.4375609323761411 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 122674 15530 VGTRGPKVQ True NCI_RA007_Epitope_Rep3 940.5454138109599 940.54430993586 68.647 2 -1.816178547495803 0.4375609323761411 1.0 ['ENST00000497892.5_1_5:60199409-60224782:-|nuORF', 'nc|ENSG00000049167|Q13216-2|ERCC8', 'ENSG00000049167|ENST00000676185|ERCC8'] 64665 2385 LRKAALKQPF True PC9_epitope_Rep3 1170.7237125260997 1170.7220549037902 13.163 3 -1.8162745172322323 0.4375609323761411 1.0 ['ENST00000222120.7_1_19:11435272-11435518:-|nuORF'] 122372 6976 VGSEPETA True NCI_RA007_Epitope_Rep5 788.35521299944 788.35466496793 33.516 1 -1.8164473252371671 0.43757824184346095 1.0 ['ENST00000571253.1_1_17:7145340-7145505:-|nuORF'] 48105 25319 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 103.99 3 -1.8165949283170844 0.4376066292956373 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 49300 19093 KHRGSLEIA True NCI_RA007_Epitope_Rep4 1009.5668775315298 1009.56578993586 82.59 2 -1.8169171199363103 0.4376301679443435 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1', 'ENST00000549154.1_1_12:53682884-53683443:+|nuORF'] 80008 21578 PKGCLLYK True PC9_epitope_Rep4 920.51535955264 920.5142699358599 91.182 2 -1.8171053007378537 0.4376301679443435 1.0 ['ENSG00000127080|ENST00000287996|IPPK'] 86530 11875 QRALYREVTLE True H1975_Epitope_Rep1 1376.7412130650398 1376.7401099358601 50.675 2 -1.8171481527812519 0.4376363978774552 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 21988 11200 ESMKYWRE True PC9_epitope_Rep1 1127.5069796969099 1127.50588993586 47.962 2 -1.817302078206612 0.43764885732959646 1.0 ['nc|ENSG00000141255|Q8NHS9-3|SPATA22', 'ENSG00000141255|ENST00000572969|SPATA22', 'nc|ENSG00000141255|Q8NHS9-2|SPATA22'] 62371 25390 LLRPIDEAT True PC9_epitope_Rep2 1026.57095985246 1026.5698699358602 103.34 2 -1.8173185970224783 0.43764885732959646 1.0 ['ASB5|p.V272E|1|0.18|ENSG00000164122|chr4:176216865-176216865|A/T|missense_variant'] 29998 5934 FYGPGPPA True NCI_RA007_Epitope_Rep5 804.3806399016398 804.37954993586 29.51 2 -1.8173546712092463 0.43766616448068063 1.0 ['ENSG00000178951|ENST00000322357|ZBTB7A'] 115007 24696 TTLHVLLV True PC9_epitope_Rep4 894.5538532363399 894.5533049679301 103.49 1 -1.8177248501869758 0.43767862285929504 1.0 ['PCDHB3|p.A656T|1|0.52|ENSG00000113205|chr5:141102615-141102615|G/A|missense_variant', 'PCDHB13|p.A656T|1|0.06|ENSG00000187372|chr5:141216089-141216089|G/A|missense_variant'] 23209 5980 EVQEKVLM True H1975_Epitope_Rep3 974.5106680950198 974.50956993586 28.013 2 -1.8177778477675044 0.43767862285929504 1.0 ['ENST00000331457.8_1_22:31796711-31799146:+|nuORF'] 13093 23093 DLSEAHFA True H1975_Epitope_Rep1 888.39774651776 888.39664993586 96.026 2 -1.8178454477259052 0.4376848518415951 1.0 ['ENSG00000099769|ENST00000215539|IGFALS', 'nc|ENSG00000099769|P35858-2|IGFALS'] 798 26438 ACKLILYLKQ True NCI_RA007_Epitope_Rep5 1191.70495122747 1191.70330490379 109.3 3 -1.8180661785978582 0.437693841382366 1.0 ['ENST00000587842.1_1_18:56212428-56246221:-|nuORF'] 303 12962 AAHSNEIL True H1975_Epitope_Rep3 853.42938099921 853.42828993586 55.089 2 -1.818183345889328 0.437693841382366 1.0 ['ENST00000554115.5_1_14:50249154-50249313:+|nuORF', 'ENSG00000165516|ENST00000298307|KLHDC2'] 58927 23428 LFVMRQQQQQ True PC9_epitope_Rep2 1304.6659399498 1304.66428490379 95.588 3 -1.8182125507993199 0.437693841382366 1.0 ['ERN2|p.P456Q|1|0.33|ENSG00000134398|chr16:23700697-23700697|G/T|missense_variant'] 47751 25414 IYQQLVRGRKI True PC9_epitope_Rep1 1372.8303028529597 1372.82920993586 102.73 2 -1.8182674511192647 0.437693841382366 1.0 ['ENSG00000078401|ENST00000379375|EDN1'] 150 11175 AADNQIYI True H1975_Epitope_Rep2 906.4446967101799 906.44358993586 48.023 2 -1.8183254805268838 0.437693841382366 1.0 ['ENSG00000104824|ENST00000221419|HNRNPL', 'nc|ENSG00000104824|P14866-2|HNRNPL', 'ENST00000568980.1_1_15:34781792-34782686:-|nuORF'] 122096 23193 VGREGRLP True PC9_epitope_Rep1 882.5035489989798 882.5030049679301 94.008 1 -1.8184634390349388 0.4377111463098548 1.0 ['ENST00000243440.1_1_1:212870399-212873318:-|nuORF'] 72756 17848 NADINPLKI True PC9_epitope_Rep3 996.5603951687599 996.55928993586 73.848 2 -1.8187014256021212 0.43771252616771705 1.0 ['ENSG00000164171|ENST00000296585|ITGA2'] 15703 8785 EDAERREREER True H1975_Epitope_Rep1 1473.6920310264902 1473.6909299358601 38.72 2 -1.8187209486489966 0.43771252616771705 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 23521 23524 EWPGSPKALE True PC9_epitope_Rep2 1112.5502244078798 1112.54912993586 95.959 2 -1.8189740098872111 0.43773120971136165 1.0 ['nc|ENSG00000151553|Q5W0V3-2|FHIP2A', 'ENSG00000151553|ENST00000369248|FHIP2A'] 48090 26121 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 108.46 3 -1.8190232734851812 0.43773120971136165 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 59896 18377 LHHGPLCL True H1975_Epitope_Rep3 888.46399268612 888.46288993586 77.038 2 -1.8190527752999062 0.43773120971136165 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 10733 19885 CVNGKKKVL True NCI_RA007_Epitope_Rep5 987.5899214752299 987.58882993586 83.401 2 -1.8193298289804187 0.43775958886661426 1.0 ['nc|ENSG00000170854|Q8IUF8-4|RIOX2', 'ENSG00000170854|ENST00000394198|RIOX2', 'nc|ENSG00000170854|Q8IUF8-2|RIOX2'] 83301 7742 QAILTPRTP True PC9_epitope_Rep4 995.57637958607 995.57528993586 37.169 2 -1.819669099573264 0.43776719459519325 1.0 ['ENST00000511482.1_1_5:306832-313953:+|nuORF'] 48072 2209 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 11.432 3 -1.8197331828072554 0.43776719459519325 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 123914 22674 VKKAILNPYFR True PC9_epitope_Rep3 1347.80269112279 1347.80104490379 92.488 3 -1.819753671061629 0.43776719459519325 1.0 ['chr10:5000391-5000550|208|11.37|0.1|6.81|-|0|None,AKR1C2|1'] 78680 14050 PEDCGQPGS True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 60.733 2 -1.819967642172243 0.43779072343064723 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 71518 24433 MKRKILLDL True NCI_RA007_Epitope_Rep5 1128.7052855806398 1128.70363490379 101.45 3 -1.820033415602801 0.43779072343064723 1.0 ['CCT6B|p.V151L|1|0.59|ENSG00000132141|chr17:34954485-34954485|C/A|missense_variant'] 122010 20288 VGQGVQAA True PC9_epitope_Rep6 728.3817025307999 728.38115496793 90.738 1 -1.8200825478254798 0.4377969499296734 1.0 ['ENST00000223641.4_1_9:101984625-101992644:+|nuORF'] 96646 7019 SENLASPSEY True H1975_Epitope_Rep3 1095.47203365683 1095.47092993586 31.961 2 -1.8202721640072617 0.4378170059137522 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'nc|ENSG00000110713|P52948-4|NUP98', 'nc|ENSG00000110713|P52948-3|NUP98'] 109066 22479 TFDPPGGV True PC9_epitope_Rep2 788.3704691407598 788.36936993586 91.955 2 -1.8204707129645408 0.4378170059137522 1.0 ['ENSG00000168334|ENST00000340369|XIRP1'] 11397 21579 DFIVKVLPPV True H1975_Epitope_Rep2 1125.6797820254499 1125.6781349037901 89.28 3 -1.8204960703838027 0.4378170059137522 1.0 ['ENSG00000182782|ENST00000328880|HCAR2'] 22583 7819 ETPAISPSK True H1975_Epitope_Rep3 928.48656152216 928.48546993586 35.054 2 -1.82052262642153 0.4378170059137522 1.0 ['nc|ENSG00000128951|P33316-2|DUT', 'ENSG00000128951|ENST00000331200|DUT'] 38989 22403 HKEEWIRW True H1975_Epitope_Rep2 1182.5934266325398 1182.59179490379 92.585 3 -1.8205408297470516 0.4378170059137522 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 79461 7056 PGPLSKQGS True PC9_epitope_Rep6 869.46068112749 869.45958993586 36.156 2 -1.8206417267575892 0.4378232317079923 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 7590 22406 ASHLARTK True PC9_epitope_Rep4 882.50354899898 882.5030049679301 94.416 1 -1.8209047337425968 0.4378467569572873 1.0 ['ENSG00000238227|ENST00000418388|TMEM250'] 132216 23279 VYKLRRKSN True PC9_epitope_Rep3 1162.6934750269797 1162.6923699358601 94.821 2 -1.8209192863267507 0.4378467569572873 1.0 ['ENSG00000180269|ENST00000570682|GPR139'] 46879 24671 IVHRRIINRF True H1975_Epitope_Rep2 1322.8047568114596 1322.8036499358602 101.46 2 -1.8210811782183596 0.43787513011893425 1.0 ['nc|ENSG00000134775|Q2V2M9-2|FHOD3', 'nc|ENSG00000134775|Q2V2M9|FHOD3', 'nc|ENSG00000134775|Q2V2M9-3|FHOD3', 'ENSG00000134775|ENST00000590592|FHOD3'] 101045 24488 SLTLLRKKVW True NCI_RA007_Epitope_Rep5 1242.7812274022199 1242.77959490379 101.66 3 -1.8212205100721013 0.4378924288229627 1.0 ['ENST00000508678.1_1_5:14681688-14687767:+|nuORF'] 52186 3262 KMFQIQFHTGF True NCI_RA007_Epitope_Rep2 1382.6805273847797 1382.67942993586 17.343 2 -1.821428838025922 0.4379048779137368 1.0 ['ENSG00000178950|ENST00000314167|GAK', 'nc|ENSG00000178950|O14976-2|GAK', 'GAK|p.G833Dfs*112|2|0.18|ENSG00000178950|chr4:867330-867330|C/-|frameshift_variant'] 84493 16887 QGRKPQPK True NCI_RA007_Epitope_Rep5 937.5457481641298 937.54464993586 71.711 2 -1.8214937813144834 0.4379048779137368 1.0 ['ENST00000497401.1_1_22:18049955-18062711:+|nuORF', 'ENST00000327451.10_1_22:18043359-18062711:+|nuORF'] 74502 18033 NKQRSRHK True NCI_RA007_Epitope_Rep5 1052.5951579680398 1052.59457496793 76.161 1 -1.821593590475705 0.43790625311437653 1.0 ['nc|ENSG00000165995|Q08289-6|CACNB2', 'nc|ENSG00000165995|Q08289-10|CACNB2', 'nc|ENSG00000165995|Q08289-2|CACNB2', 'nc|ENSG00000165995|Q08289-3|CACNB2', 'nc|ENSG00000165995|Q08289-9|CACNB2', 'nc|ENSG00000165995|Q08289-5|CACNB2', 'nc|ENSG00000165995|Q08289-7|CACNB2', 'nc|ENSG00000165995|Q08289-4|CACNB2', 'nc|ENSG00000165995|Q08289-8|CACNB2', 'ENSG00000165995|ENST00000324631|CACNB2'] 123335 14135 VHVKQCIV True PC9_epitope_Rep2 924.5215075622399 924.52095496793 59.641 1 -1.8216684749568746 0.43790625311437653 1.0 ['nc|ENSG00000165475|Q9Y2S2-2|CRYL1', 'ENSG00000165475|ENST00000298248|CRYL1'] 95328 10918 SAGASGSK True H1975_Epitope_Rep1 663.31876792107 663.3182149679301 46.959 1 -1.8217622334511676 0.4379235505160119 1.0 ['ENSG00000198837|ENST00000361217|DENND4B', 'ENST00000480340.1_1_1:153904922-153905273:-|nuORF', 'ENST00000462423.1_1_1:153904922-153905503:-|nuORF'] 100607 11365 SLQKEPHV True PC9_epitope_Rep2 936.5028802926398 936.50178993586 49.038 2 -1.821903205445277 0.4379249252574466 1.0 ['RFPL2|p.G134V|1|0.64|ENSG00000128253|chr22:32193057-32193057|C/A|missense_variant'] 129597 12211 VTGPYEKP True H1975_Epitope_Rep2 889.4545331178899 889.4539849679301 52.053 1 -1.8219504649358165 0.4379249252574466 1.0 ['nc|ENSG00000167633|P43629-2|KIR3DL1', 'ENSG00000167633|ENST00000391728|KIR3DL1'] 59241 7798 LGGLVTTV True PC9_epitope_Rep2 758.4538048419 758.45270993586 35.366 2 -1.8222970330529 0.43795329472600236 1.0 ['ENST00000528047.5_1_8:145736154-145736544:+|nuORF', 'ENSG00000167700|ENST00000301327|MFSD3'] 79361 25447 PGKRYLQVSK True PC9_epitope_Rep1 1174.6822416369398 1174.68114993586 102.87 2 -1.8226580189387853 0.43803702719461424 1.0 ['ENSG00000107815|ENST00000311916|TWNK'] 87632 20341 QTWKDFRYH True PC9_epitope_Rep4 1279.60980497267 1279.6087099358601 86.386 2 -1.8229184954077384 0.438065394793662 1.0 ['ENST00000418543.7_1_19:12786482-12786566:+|nuORF'] 72058 14350 MRARHWKQI True NCI_RA007_Epitope_Rep5 1224.6662147333197 1224.66510993586 61.883 2 -1.8230254246855766 0.43807298817485274 1.0 ['ENSG00000174844|ENST00000495027|DNAH12', 'nc|ENSG00000174844|Q6ZR08|DNAH12'] 56465 7570 LDTAGQEEFGA True H1975_Epitope_Rep2 1136.49858275784 1136.4974899358601 34.07 2 -1.8231048058320019 0.43807298817485274 1.0 ['ENSG00000126458|ENST00000246792|RRAS', 'ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2', 'nc|ENSG00000133818|P62070-3|RRAS2'] 134587 8503 WVWLEMGQCY True PC9_epitope_Rep3 1313.55730101761 1313.5562099358601 37.667 2 -1.8232230803432425 0.43807298817485274 1.0 ['nc|ENSG00000230561|P0DO97|CCDC192'] 59265 7030 LGGRHPLHHE True NCI_RA007_Epitope_Rep4 1151.59482361487 1151.5937299358602 33.667 2 -1.823244395800179 0.43807710192422666 1.0 ['ENST00000548086.1_12:52174024-52180420:+|nuORF', 'ENST00000545061.1_12:52168115-52180420:+|nuORF'] 117757 25520 VALKPLGGL True PC9_epitope_Rep1 866.5589386167799 866.5583949679301 103.16 1 -1.8233300443534346 0.43807710192422666 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 109104 7546 TFGGLGSL True PC9_epitope_Rep3 750.39120458534 750.39010993586 34.025 2 -1.8234300197495568 0.43807710192422666 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 86936 15202 QRSHTKEKPYK True NCI_RA007_Epitope_Rep1 1400.75244645508 1400.7513499358602 63.203 2 -1.8236267556041033 0.43807710192422666 1.0 ['ENSG00000197937|ENST00000334197|ZNF347', 'nc|ENSG00000197937|Q96SE7-2|ZNF347'] 136364 5828 YHDGAATFLL True PC9_epitope_Rep4 1106.53965972418 1106.53856993586 29.281 2 -1.8236900782966938 0.43807710192422666 1.0 ['nc|ENSG00000197969|Q96RL7-2|VPS13A', 'nc|ENSG00000197969|Q96RL7-4|VPS13A', 'nc|ENSG00000197969|Q96RL7-3|VPS13A', 'ENSG00000197969|ENST00000360280|VPS13A'] 69611 4064 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 20.506 3 -1.8237526894577814 0.43807710192422666 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 82833 10117 PVSTRAALVPA True NCI_RA007_Epitope_Rep3 1080.6291434349198 1080.6280499358602 46.884 2 -1.823786698606612 0.43808332318457094 1.0 ['ENSG00000145217|ENST00000398516|SLC26A1'] 112720 8106 TPHRGGGG True NCI_RA007_Epitope_Rep3 737.3568847652898 737.35633496793 38.988 1 -1.8238706865425454 0.4380895443071609 1.0 ['ENSG00000142408|ENST00000270458|CACNG8'] 36953 23596 GVRGSGSG True PC9_epitope_Rep1 675.33000131111 675.32945496793 95.55 1 -1.8240723068036884 0.4381462701769147 1.0 ['ENST00000436944.5_1_7:73098152-73100976:+|nuORF'] 112060 16477 TLTETPLR True PC9_epitope_Rep1 929.5181960036099 929.5176449679301 68.205 1 -1.8240764880719038 0.4381462701769147 1.0 ['nc|ENSG00000167733|Q7Z5J1-4|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-3|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1|HSD11B1L'] 79548 23161 PGSKPFCPT True NCI_RA007_Epitope_Rep5 932.4425885351999 932.44148993586 96.347 2 -1.8244752684878112 0.4382078448304494 1.0 ['ENSG00000213445|ENST00000534313|SIPA1'] 44958 21337 IQHAPRPQL True PC9_epitope_Rep1 1058.5985120129799 1058.59740993586 86.904 2 -1.8246343647040373 0.4382251350633248 1.0 ['ENST00000579018.5_2_17:71084805-71087985:-|nuORF', 'ENST00000583146.5_1_17:71084805-71085878:-|nuORF', 'ENST00000255559.7_1_17:71084805-71088829:-|nuORF', 'ENST00000580557.5_2_17:71084805-71088773:-|nuORF'] 135120 16620 YAPEPGAA True H1975_Epitope_Rep3 774.3548190766198 774.3542749679301 69.433 1 -1.824733284891941 0.43823135427160714 1.0 ['ENST00000290913.7_2_3:126679085-126679208:+|nuORF'] 74485 22988 NKLFWIRV True PC9_epitope_Rep5 1074.6338348925399 1074.6327299358602 93.414 2 -1.8248672318969898 0.4382486438613971 1.0 ['nc|ENSG00000130150|Q8NHP6-2|MOSPD2', 'ENSG00000130150|ENST00000380492|MOSPD2'] 69758 25421 LWLKLGSG True PC9_epitope_Rep2 872.51198842436 872.5114349679301 103.46 1 -1.825147762820035 0.43825137821861093 1.0 ['ENST00000560329.1_1_15:73192182-73192437:-|nuORF'] 41167 13548 HYTFLWLKWRF True PC9_epitope_Rep5 1595.84013926067 1595.83793987172 57.135 4 -1.8252443636569153 0.43825137821861093 1.0 ['TAS2R41|p.S117Y|2|0.48|ENSG00000221855|chr7:143478222-143478222|C/A|missense_variant'] 69609 3344 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 16.966 3 -1.825261030904119 0.43825137821861093 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 97916 22213 SHNNRTTTWT True NCI_RA007_Epitope_Rep5 1216.5584976758 1216.55740993586 92.59 2 -1.8252739859811458 0.43825137821861093 1.0 ['NEDD4L|p.N405S|1|0.41|ENSG00000049759|chr18:58341126-58341126|A/G|missense_variant'] 43847 16011 ILAVPVRTDA True PC9_epitope_Rep2 1053.6182443980501 1053.6171499358602 66.841 2 -1.8257130347469508 0.43827973653622626 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2'] 133180 12159 WDRVDIAK True PC9_epitope_Rep2 1001.5294293936498 1001.52832993586 52.081 2 -1.825730030961998 0.43828595465816506 1.0 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5', 'nc|ENSG00000070985|Q9NZQ8-3|TRPM5', 'nc|ENSG00000119121|Q9BX84-4|TRPM6', 'nc|ENSG00000119121|Q9BX84-3|TRPM6', 'nc|ENSG00000119121|Q9BX84-2|TRPM6', 'ENSG00000119121|ENST00000360774|TRPM6', 'nc|ENSG00000119121|Q9BX84-6|TRPM6', 'nc|ENSG00000119121|Q9BX84-5|TRPM6', 'ENSG00000092439|ENST00000646667|TRPM7'] 20396 24556 EPLPLAYA True PC9_epitope_Rep5 872.4643695255999 872.46326993586 99.566 2 -1.8258098159847898 0.4382949048604731 1.0 ['ENSG00000142619|ENST00000375460|PADI3'] 44957 20676 IQGTWCKDILQ True H1975_Epitope_Rep2 1303.65945758703 1303.65836993586 85.637 2 -1.8258100721425228 0.4382949048604731 1.0 ['nc|ENSG00000112282|Q9ULK4-4|MED23', 'nc|ENSG00000112282|Q9ULK4-5|MED23', 'nc|ENSG00000112282|Q9ULK4-3|MED23', 'ENSG00000112282|ENST00000368068|MED23', 'MED23-RNF217|1|fusion', 'nc|ENSG00000112282|Q9ULK4-2|MED23'] 33134 23610 GKPNKRRGF True PC9_epitope_Rep3 1058.6097454030198 1058.60864993586 96.102 2 -1.8259547986632423 0.4382949048604731 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 55917 9224 LDGRVLYWP True PC9_epitope_Rep6 1117.59202965021 1117.59092993586 45.624 2 -1.826029207855381 0.4382949048604731 1.0 ['ENSG00000016391|ENST00000315251|CHDH'] 131311 25358 VVQVIKLA True H1975_Epitope_Rep3 868.5745886809199 868.57404496793 105.47 1 -1.8260678759067954 0.4382949048604731 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 82575 8835 PVHIEGVSKVS True PC9_epitope_Rep5 1150.63462273818 1150.63352993586 38.93 2 -1.8261598639579486 0.4383011224015408 1.0 ['ENST00000419235.6_1_6:350471-350555:+|nuORF'] 62516 8188 LLSTTRSIERA True NCI_RA007_Epitope_Rep1 1245.7040992803302 1245.70300993586 35.845 2 -1.8263551671265086 0.4383246258744355 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G'] 46757 15723 IVAWLSRSP True PC9_epitope_Rep3 1027.5814649665099 1027.58036993586 65.636 2 -1.8264072983723314 0.4383246258744355 1.0 ['ENST00000510733.1_1_4:155665168-155665375:+|nuORF'] 93798 22708 RVAAGGAP True PC9_epitope_Rep6 697.38712226441 697.3865749679301 100.42 1 -1.8265241273122552 0.4383432764784664 1.0 ['ENST00000274364.10_1_5:75699116-75757478:+|nuORF'] 10554 2057 CQFCDFRYSKS True NCI_RA007_Epitope_Rep2 1382.5747419868997 1382.57308490379 11.22 3 -1.8265312528771498 0.4383432764784664 1.0 ['nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'ENSG00000104447|ENST00000395715|TRPS1'] 43996 10333 ILHKVCVVS True H1975_Epitope_Rep3 996.57902243836 996.57792993586 44.798 2 -1.8265681571298342 0.4383432764784664 1.0 ['ENST00000262430.5_1_16:83949618-83949660:+|nuORF'] 60738 24338 LKARPAQR True PC9_epitope_Rep5 938.57738264558 938.57628993586 98.651 2 -1.8265902300447383 0.43834949307123566 1.0 ['ENST00000396865.6_1_5:54993817-55008116:-|nuORF', 'ENST00000506624.5_2_5:55007270-55008116:-|nuORF', 'ENST00000513993.5_1_5:55000175-55008116:-|nuORF'] 131314 25765 VVQVIKLA True NCI_RA007_Epitope_Rep5 868.5745886809199 868.57404496793 106.65 1 -1.826731464547075 0.4383508577753182 1.0 ['ENSG00000161807|ENST00000541538|OR7G1'] 10422 23172 CLSLMTMRTLE True PC9_epitope_Rep6 1296.6240006784399 1296.6229099358602 102.23 2 -1.82677085303636 0.4383508577753182 1.0 ['ENST00000305105.2_1_7:100865971-100866960:+|nuORF'] 42166 9359 IEFKQSSHQ True H1975_Epitope_Rep3 1102.54072235334 1102.5396299358601 40.999 2 -1.8269896276339994 0.4383632902426067 1.0 ['nc|ENSG00000129003|Q709C8-4|VPS13C', 'nc|ENSG00000129003|Q709C8-2|VPS13C', 'nc|ENSG00000129003|Q709C8-3|VPS13C', 'ENSG00000129003|ENST00000644861|VPS13C'] 688 15768 AAVEALSSDPA True PC9_epitope_Rep5 1029.4978544818498 1029.4967499358602 65.646 2 -1.82699298732926 0.4383632902426067 1.0 ['ENSG00000044115|ENST00000302763|CTNNA1', 'nc|ENSG00000044115|P35221-2|CTNNA1', 'nc|ENSG00000044115|P35221-3|CTNNA1', 'CTNNA1|p.L776Pfs*102|1|0.11|ENSG00000044115|chr5:138932603-138932604|-/C|frameshift_variant'] 82104 12101 PTAEKPEQE True H1975_Epitope_Rep3 1027.4822044177097 1027.4816749679298 51.712 1 -1.8274007147042686 0.4383916416721083 1.0 ['ENSG00000103994|ENST00000564754|ZNF106', 'nc|ENSG00000103994|Q9H2Y7|ZNF106'] 90858 25360 RKWQTLKAT True PC9_epitope_Rep3 1130.6560268890998 1130.65492993586 102.97 2 -1.8274564445984667 0.4383978573167762 1.0 ['ENST00000389045.7_1_2:230701608-230701689:-|nuORF'] 114693 18485 TSSKGKKGKK True NCI_RA007_Epitope_Rep5 1047.6400424717897 1047.6389499358602 77.928 2 -1.8275537437212706 0.43841028819336847 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 41870 11944 IDTWPFVGPS True PC9_epitope_Rep5 1117.5444107514497 1117.5433099358602 50.941 2 -1.8275602321950695 0.43841028819336847 1.0 ['OR6N2|p.R50Hfs*85|1|0.31|ENSG00000188340|chr1:158777487-158777487|C/-|frameshift_variant'] 123429 16117 VIEALLVP True NCI_RA007_Epitope_Rep5 852.5320551625999 852.53094993586 68.722 2 -1.8277912482871712 0.43847183948116913 1.0 ['nc|ENSG00000119689|P36957-2|DLST', 'ENSG00000119689|ENST00000334220|DLST', 'ENST00000556582.5_1_14:75348625-75357926:+|nuORF', 'ENST00000555071.5_1_14:75348653-75357926:+|nuORF', 'ENST00000555988.1_2_14:75356010-75360059:+|nuORF'] 101606 23154 SPFCSCLL True H1975_Epitope_Rep2 868.38229677776 868.38118993586 95.524 2 -1.8279201783739376 0.438484861898017 1.0 ['ENST00000334801.7_1_11:118768619-118768991:-|nuORF'] 45895 7498 ISREPEPP True H1975_Epitope_Rep2 923.4712458111899 923.47014993586 33.79 2 -1.8279767033464998 0.438484861898017 1.0 ['ENSG00000151690|ENST00000392328|MFSD6'] 57224 7970 LEFCFSRE True H1975_Epitope_Rep3 1029.45896687533 1029.4578699358601 35.628 2 -1.827989990690691 0.438484861898017 1.0 ['nc|ENSG00000161813|Q71RC2-3|LARP4', 'ENSG00000161813|ENST00000398473|LARP4', 'nc|ENSG00000161813|Q71RC2-4|LARP4', 'nc|ENSG00000161813|Q71RC2-7|LARP4', 'nc|ENSG00000161813|Q71RC2-6|LARP4', 'nc|ENSG00000161813|Q71RC2-5|LARP4'] 53032 19126 KRSVITIATS True NCI_RA007_Epitope_Rep2 1074.6397081186199 1074.6386099358601 79.261 2 -1.8280240654032984 0.438484861898017 1.0 ['ENSG00000226124|ENST00000420128|FTCDNL1', 'nc|ENSG00000226124|E5RQL4|FTCDNL1'] 23056 18713 EVKVLVAEP True PC9_epitope_Rep6 982.5698972232998 982.56880993586 84.622 2 -1.828041675129869 0.438484861898017 1.0 ['CFAP70|p.R914Mfs*44|1|0.16|ENSG00000156042|chr10:73275576-73275588|TGTGCAAGCACTC/-|frameshift_variant', 'nc|ENSG00000156042|Q5T0N1-2|CFAP70', 'nc|ENSG00000156042|Q5T0N1|CFAP70', 'ENSG00000156042|ENST00000355577|CFAP70', 'ENST00000493787.5_1_10:75082782-75108210:-|nuORF'] 30835 6040 GAPWTSWGPGP True PC9_epitope_Rep5 1111.5086939490698 1111.50758993586 28.226 2 -1.8280787526234963 0.438484861898017 1.0 ['ENST00000390654.7_2_5:177686746-178016941:-|nuORF'] 91423 23598 RNKVWRHRLH True NCI_RA007_Epitope_Rep4 1400.80140276652 1400.80030993586 102.37 2 -1.8281661603807713 0.438484861898017 1.0 ['ENST00000583079.1_1_17:18023566-18025792:+|nuORF'] 70639 22477 MARCIRERD True H1975_Epitope_Rep2 1148.5542813258398 1148.55318993586 92.877 2 -1.828224387787527 0.438484861898017 1.0 ['ENST00000565149.5_1_16:88718935-88722722:-|nuORF', 'ENSG00000167508|ENST00000301012|MVD'] 101226 9331 SLWAWVERE True H1975_Epitope_Rep3 1174.5771078620598 1174.5760099358602 40.889 2 -1.8282626416279888 0.438484861898017 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 55653 14566 LDANLPNLIL True H1975_Epitope_Rep1 1094.63356010902 1094.6324699358602 61.233 2 -1.8283925517148265 0.438484861898017 1.0 ['ENST00000361758.8_1_6:163993048-163993090:+|nuORF'] 37678 2824 HALFPGGK True PC9_epitope_Rep5 825.4497225209699 825.44862993586 15.549 2 -1.8285887937173357 0.438484861898017 1.0 ['nc|ENSG00000142273|Q9ULV8-2|CBLC', 'ENSG00000142273|ENST00000647358|CBLC'] 127564 16979 VQVRNPLNVR True NCI_RA007_Epitope_Rep4 1193.6992886834098 1193.69818993586 73.587 2 -1.8287718700340012 0.4385132069625646 1.0 ['ENSG00000128000|ENST00000434248|ZNF780B'] 55111 12332 LALRGGSL True PC9_epitope_Rep3 785.47593726881 785.47484993586 52.463 2 -1.8289684138075757 0.43855261701892223 1.0 ['ENST00000411637.6_2_9:134000990-134001116:+|nuORF'] 130239 21948 VTSPMEGTVRK True PC9_epitope_Rep1 1203.62815745875 1203.62650490379 89.241 3 -1.82917486903066 0.43859474412171506 1.0 ['ENSG00000173599|ENST00000393960|PC', 'ENST00000528224.1_1_11:66616372-66617354:-|nuORF'] 3838 8279 AGYSKNEP True NCI_RA007_Epitope_Rep5 864.39774651776 864.39664993586 38.524 2 -1.8293141425751878 0.43859474412171506 1.0 ['ENST00000374156.8_1_10:50374798-50374906:-|nuORF'] 96483 20332 SEKKLCGH True NCI_RA007_Epitope_Rep5 900.4487365447999 900.44762993586 85.145 2 -1.8293289031414521 0.43859474412171506 1.0 ['ENST00000395811.9_1_17:17088549-17088822:+|nuORF'] 4986 22956 ALKQHALRR True PC9_epitope_Rep1 1091.6675946323098 1091.66707496793 93.102 1 -1.829353032930524 0.43859474412171506 1.0 ['ENST00000433921.5_1_2:219503064-219516433:-|nuORF', 'nc|ENSG00000115568|P52746|ZNF142', 'ENSG00000115568|ENST00000411696|ZNF142'] 25094 12266 FDIGWLAE True NCI_RA007_Epitope_Rep1 949.4545331178899 949.45342993586 51.683 2 -1.8293743586440476 0.43859474412171506 1.0 ['ENSG00000133116|ENST00000380099|KL'] 60356 13913 LIHLSPYFL True H1975_Epitope_Rep2 1101.6222671493301 1101.62116993586 58.663 2 -1.829648530303795 0.43863550864148354 1.0 ['ENSG00000119285|ENST00000366582|HEATR1'] 69614 26344 LVTVLQRRRP True H1975_Epitope_Rep2 1236.7778733572798 1236.77623490379 108.4 3 -1.8297930304595271 0.43863550864148354 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 106644 21492 SWYLDQTLRK True PC9_epitope_Rep2 1308.6826355597598 1308.68098490379 88.139 3 -1.8298050844324967 0.43863550864148354 1.0 ['ENSG00000120733|ENST00000314358|KDM3B', 'nc|ENSG00000120733|Q7LBC6-2|KDM3B', 'nc|ENSG00000120733|Q7LBC6-3|KDM3B'] 25494 24599 FEPSRLLLRK True PC9_epitope_Rep1 1257.7557409303697 1257.75409490379 99.485 3 -1.8298730848955733 0.43864171986855355 1.0 ['ENST00000320316.7_1_17:7139851-7140732:-|nuORF'] 92786 25161 RRKRRHRTIF True NCI_RA007_Epitope_Rep3 1424.8701510326798 1424.8690499358602 108.75 2 -1.8300298997992916 0.4386700597477318 1.0 ['ENSG00000133937|ENST00000238558|GSC'] 107726 5302 TALLVIIIII True PC9_epitope_Rep1 1080.75221868972 1080.75112993586 25.235 2 -1.8301975191881246 0.438720527544506 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 28625 19193 FSRQREKMERR True NCI_RA007_Epitope_Rep3 1521.7946627035697 1521.7935699358602 83.796 2 -1.83037642202736 0.43873780177468963 1.0 ['ENSG00000229549|ENST00000287721|TSPY8', 'nc|ENSG00000258992|Q01534-2|TSPY1', 'ENSG00000258992|ENST00000451548|TSPY1', 'ENSG00000236424|ENST00000428845|TSPY10', 'ENSG00000228927|ENST00000457222|TSPY3', 'ENSG00000168757|ENST00000320701|TSPY2', 'ENSG00000238074|ENST00000440215|TSPY9', 'ENSG00000233803|ENST00000426950|TSPY4'] 80010 16824 PKGEKRNPIR True NCI_RA007_Epitope_Rep4 1193.6992886834098 1193.69818993586 72.897 2 -1.8304453902445181 0.43873915737298635 1.0 ['ENSG00000166012|ENST00000448108|TAF1D'] 45438 9170 ISEAEQRTI True PC9_epitope_Rep2 1045.5403880001702 1045.53928993586 40.61 2 -1.830553200592396 0.43873915737298635 1.0 ['ENSG00000077420|ENST00000376236|APBB1IP', 'nc|ENSG00000077420|Q7Z5R6-2|APBB1IP'] 114573 22784 TSKRKTKIS True PC9_epitope_Rep3 1047.64004247179 1047.6389499358602 92.909 2 -1.8307443215666832 0.4387453670409913 1.0 ['ENSG00000011405|ENST00000691414|PIK3C2A', 'ENST00000531428.1_1_11:17099415-17121458:-|nuORF'] 57013 18956 LEEEKSRLL True PC9_epitope_Rep5 1115.6186383208699 1115.61754993586 77.938 2 -1.8311321665156974 0.4387577859647958 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 107368 5287 SYSIYIYKVLK True PC9_epitope_Rep1 1375.7751389622697 1375.7734949037902 25.179 3 -1.8312196484593393 0.4387577859647958 1.0 ['ENSG00000146047|ENST00000274764|H2BC1'] 34876 25473 GQVLVLELND True PC9_epitope_Rep2 1098.59208921986 1098.59098993586 103.66 2 -1.831554161202325 0.43876805982697964 1.0 ['nc|ENSG00000073350|Q6P1M3-2|LLGL2', 'ENSG00000073350|ENST00000392550|LLGL2', 'ENST00000545227.6_1_17:73554011-73570984:+|nuORF', 'LLGL2|p.G740Afs*31|1|0.09|ENSG00000073350|chr17:75571705-75571705|G/-|frameshift_variant'] 107351 9137 SYRSSVSF True PC9_epitope_Rep4 931.43994568291 931.43884993586 42.736 2 -1.831690153882388 0.43876805982697964 1.0 ['nc|ENSG00000121904|Q7Z408|CSMD2', 'ENSG00000121904|ENST00000373381|CSMD2'] 582 17736 AARLQLLTLQ True PC9_epitope_Rep3 1125.6869926642098 1125.6853349037901 73.418 3 -1.8319100280826313 0.43876805982697964 1.0 ['nc|ENSG00000288550|Q8NAC3-4|IL17RC', 'ENST00000483582.5_1_3:9958999-9974679:+|nuORF', 'nc|ENSG00000288550|Q8NAC3-6|IL17RC', 'nc|ENSG00000288550|Q8NAC3-7|IL17RC', 'nc|ENSG00000288550|Q8NAC3-8|IL17RC', 'nc|ENSG00000288550|Q8NAC3-3|IL17RC', 'nc|ENSG00000288550|Q8NAC3-5|IL17RC', 'ENST00000451271.5_1_3:9958923-9975274:+|nuORF', 'ENSG00000163702|ENST00000403601|IL17RC', 'nc|ENSG00000288550|Q8NAC3|IL17RC', 'ENST00000498214.5_1_3:9965818-9972589:+|nuORF', 'ENST00000464406.5_1_3:9965750-9972589:+|nuORF', 'ENST00000494365.5_1_3:9965750-9975274:+|nuORF', 'ENST00000466046.5_1_3:9965750-9975274:+|nuORF'] 38201 20719 HETGHVLG True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 86.666 2 -1.831940353025489 0.43876805982697964 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 90828 24842 RKVIEDFKTK True NCI_RA007_Epitope_Rep1 1262.7346711326197 1262.73356993586 102.83 2 -1.8319411136958133 0.43876805982697964 1.0 ['nc|ENSG00000143882|Q8NEY4-2|ATP6V1C2', 'ENSG00000143882|ENST00000272238|ATP6V1C2'] 139192 10106 YSTFLKRK True H1975_Epitope_Rep1 1041.5971150306498 1041.5960099358601 43.811 2 -1.8319729229810389 0.43876805982697964 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|26|1|sense'] 26868 21454 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 89.586 2 -1.832005539041754 0.43876805982697964 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 43478 6223 IHVFPWDQEYF True H1975_Epitope_Rep1 1479.68230120659 1479.6812099358601 29.005 2 -1.8322958993812375 0.43877426848830137 1.0 ['ENST00000484913.5_1_7:92116773-92148321:-|nuORF', 'ENSG00000127980|ENST00000248633|PEX1'] 126824 15672 VPSVAPGLSP True PC9_epitope_Rep4 922.5123823471799 922.5118349679301 68.209 1 -1.8323804139982374 0.4387804770122572 1.0 ['ENST00000460402.5_1_22:19799956-19842309:-|nuORF'] 28556 8285 FSLLQPVP True NCI_RA007_Epitope_Rep5 899.5116540711899 899.51054993586 38.546 2 -1.832534040284605 0.43878668539885174 1.0 ['ENST00000267102.12_1_12:49498261-49498554:-|nuORF'] 16330 5563 EEKESQRISA True H1975_Epitope_Rep2 1175.57823006087 1175.57712993586 26.406 2 -1.832725661430878 0.438803955839731 1.0 ['ENSG00000156049|ENST00000341700|GNA14'] 79991 6350 PKANGQNQAS True NCI_RA007_Epitope_Rep5 1013.48902113365 1013.4884749679301 31.1 1 -1.8327452086845883 0.43880530973451326 1.0 ['ENSG00000099381|ENST00000262519|SETD1A'] 46488 18630 ITPEIKHF True PC9_epitope_Rep1 983.5440168286299 983.54290993586 76.448 2 -1.8327979053659738 0.43880530973451326 1.0 ['nc|ENSG00000101605|P52179-2|MYOM1', 'ENSG00000101605|ENST00000356443|MYOM1'] 40935 10756 HVWTARPSQ True NCI_RA007_Epitope_Rep5 1080.54647644012 1080.5453699358602 48.011 2 -1.8330827769541245 0.43885632120340673 1.0 ['ENST00000310074.7_1_4:7057430-7057760:+|nuORF'] 48144 26210 KAQILKRRLVP True PC9_epitope_Rep2 1320.87177374212 1320.8701349037901 106.88 3 -1.83312575810741 0.43885632120340673 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 10363 22306 CITPKRRLTR True NCI_RA007_Epitope_Rep3 1242.7342942931398 1242.73264490379 96.94 3 -1.8331752641851413 0.43885632120340673 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 90865 24501 RKYPKLKEVD True PC9_epitope_Rep5 1274.73467113262 1274.73356993586 99.325 2 -1.8332014694559067 0.43885632120340673 1.0 ['ENSG00000161980|ENST00000293860|POLR3K'] 44179 23181 ILQWRGTV True PC9_epitope_Rep2 971.5552502186699 971.55414993586 94.651 2 -1.8332276082431673 0.43885632120340673 1.0 ['nc|ENSG00000178188|Q9NRF2-2|SH2B1', 'nc|ENSG00000178188|Q9NRF2-3|SH2B1', 'ENSG00000178188|ENST00000684370|SH2B1'] 14771 7590 DWENTDWF True H1975_Epitope_Rep3 1111.42468954159 1111.42417496793 34.177 1 -1.8332778456317733 0.43885632120340673 1.0 ['nc|ENSG00000140391|O60637-3|TSPAN3', 'nc|ENSG00000140391|O60637-2|TSPAN3', 'ENSG00000140391|ENST00000267970|TSPAN3'] 53113 8052 KSGEPQSDDIE True H1975_Epitope_Rep1 1203.52552578167 1203.52497496793 35.916 1 -1.8333355409873358 0.43885632120340673 1.0 ['nc|ENSG00000114062|Q05086|UBE3A'] 10372 14854 CKCSCRTG True NCI_RA007_Epitope_Rep5 856.33536366868 856.33426993586 63.806 2 -1.8334005502907755 0.43885632120340673 1.0 ['VWCE|p.Y201C|1|0.43|ENSG00000167992|chr11:61282845-61282845|T/C|missense_variant'] 120732 3528 VGATREKE True NCI_RA007_Epitope_Rep1 888.4664947839199 888.46538993586 17.646 2 -1.8334358246619284 0.43885632120340673 1.0 ['ENST00000268206.11_1_15:82554125-82555004:-|nuORF'] 17841 22789 EIAKNGVS True PC9_epitope_Rep1 816.4341320264799 816.4335849679301 92.469 1 -1.8334368213155618 0.43885632120340673 1.0 ['ENST00000419785.1_1_1:2303243-2316539:-|nuORF'] 59658 14986 LGSSPLVPAP True PC9_epitope_Rep6 936.5280324113199 936.52692993586 69.657 2 -1.833963491258412 0.4388811467250647 1.0 ['ENSG00000063169|ENST00000594866|BICRA', 'nc|ENSG00000063169|Q9NZM4-2|BICRA'] 63156 7272 LNRYIHRER True PC9_epitope_Rep5 1255.6897866288698 1255.68814490379 32.936 3 -1.83406399582616 0.4388811467250647 1.0 ['ENST00000497493.1_1_21:38596799-38596853:-|nuORF'] 100410 16915 SLNYFFRAI True PC9_epitope_Rep5 1129.59202965021 1129.59092993586 70.079 2 -1.8340825650738324 0.4388811467250647 1.0 ['nc|ENSG00000092020|Q969Q6-2|PPP2R3C', 'ENSG00000092020|ENST00000261475|PPP2R3C'] 54847 4267 LAGASPLH True NCI_RA007_Epitope_Rep5 764.4180880395202 764.41698993586 22.986 2 -1.8341595583762627 0.4388811467250647 1.0 ['ENST00000360121.4_1_16:29677771-29678056:+|nuORF'] 65474 16743 LSFHKAKAP True PC9_epitope_Rep2 997.5709002828099 997.56980993586 69.648 2 -1.834350316249103 0.43889355866218366 1.0 ['KLF8|p.P94A|1|0.1|ENSG00000102349|chrX:56265378-56265378|C/G|missense_variant'] 69754 22990 LWKYEGTRE True PC9_epitope_Rep6 1180.58767254576 1180.58656993586 101.53 2 -1.8343988212862712 0.43889355866218366 1.0 ['ENST00000407215.7_1_17:45915212-45915578:-|nuORF'] 36856 9742 GVPWKLHI True NCI_RA007_Epitope_Rep5 948.5545219426799 948.55342993586 44.112 2 -1.8345735426931018 0.438902467347187 1.0 ['ENSG00000166016|ENST00000435224|ABTB2', 'nc|ENSG00000166016|Q8N961-2|ABTB2'] 139020 23092 YSHGITLV True PC9_epitope_Rep6 888.4705175352 888.46942993586 101.92 2 -1.8346466828686208 0.438902467347187 1.0 ['ENSG00000120645|ENST00000538872|IQSEC3', 'nc|ENSG00000120645|Q9UPP2-2|IQSEC3'] 48133 25564 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 106.38 3 -1.8347935239148818 0.438902467347187 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 134604 15206 WWDIYYTLFEK True NCI_RA007_Epitope_Rep2 1562.7445671099797 1562.74397496793 63.841 1 -1.8347998901653078 0.438902467347187 1.0 ['ENST00000513648.5_1_5:102201854-102209236:+|nuORF'] 90166 13465 RHERIEAPW True PC9_epitope_Rep2 1192.6101393258398 1192.60849490379 57.072 3 -1.834820550017129 0.438902467347187 1.0 ['ENSG00000158042|ENST00000288937|MRPL17'] 137088 23137 YLCRQRPK True PC9_epitope_Rep6 1062.5756683934198 1062.5745699358602 102.1 2 -1.8352765264436386 0.43896396894561057 1.0 ['ENST00000535164.5_1_16:19612936-19627472:+|nuORF'] 134548 24366 WVLLRSSKRQR True PC9_epitope_Rep2 1427.8473498994301 1427.84569490379 99.29 3 -1.835514839880009 0.43897152336190215 1.0 ['ENST00000492190.5_1_5:126112854-126113319:+|nuORF'] 120900 22549 VGEAALQVRT True PC9_epitope_Rep6 1042.5771078620598 1042.57657496793 99.748 1 -1.8355912049407561 0.43897152336190215 1.0 ['ENST00000518575.5_3_8:144373699-144373822:+|nuORF'] 121900 11796 VGPHGQEG True NCI_RA007_Epitope_Rep2 779.3562160589499 779.35566496793 50.483 1 -1.835632925750757 0.43897152336190215 1.0 ['ENST00000357436.4_1_22:38051691-38051868:+|nuORF'] 33999 22482 GNGVLQVS True PC9_epitope_Rep5 772.40791727864 772.40682993586 91.478 2 -1.8357683645480984 0.43899013579864643 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 35971 20800 GVAVLGGF True PC9_epitope_Rep1 718.40137534622 718.40082496793 84.833 1 -1.835811088457889 0.43899013579864643 1.0 ['ENSG00000076321|ENST00000209884|KLHL20', 'nc|ENSG00000076321|Q9Y2M5-2|KLHL20'] 14171 8299 DSPAVAAVVP True H1975_Epitope_Rep1 924.4916469025999 924.49054993586 36.854 2 -1.8358460426008343 0.43899013579864643 1.0 ['ENST00000358729.8_1_1:110163725-110168306:+|nuORF'] 122449 6949 VGSLPLEK True PC9_epitope_Rep5 841.49091862661 841.48982993586 31.698 2 -1.8361397740075793 0.4390184564686107 1.0 ['nc|ENSG00000169258|Q7Z2K8-2|GPRIN1', 'ENSG00000169258|ENST00000303991|GPRIN1'] 126979 22998 VPVVLNNPY True H1975_Epitope_Rep3 1013.5545815123298 1013.55348993586 96.067 2 -1.8362365645795946 0.4390198051553118 1.0 ['NOS1|p.S1027Afs*23|2|0.22|ENSG00000089250|chr12:117234722-117234722|C/-|frameshift_variant', 'NOS1|p.P1042Lfs*8|1|0.25|ENSG00000089250|chr12:117234675-117234675|G/-|frameshift_variant', 'nc|ENSG00000089250|P29475-2|NOS1', 'ENSG00000089250|ENST00000317775|NOS1', 'NOS1|p.P526Rfs*39|1|0.26|ENSG00000089250|chr12:117278046-117278046|G/-|frameshift_variant', 'NOS1|p.I464Sfs*101|1|0.25|ENSG00000089250|chr12:117280860-117280860|G/-|frameshift_variant', 'NOS1|p.M688Cfs*52|1|0.29|ENSG00000089250|chr12:117265391-117265391|G/-|frameshift_variant', 'nc|ENSG00000089250|P29475-5|NOS1', 'nc|ENSG00000089250|P29475-4|NOS1'] 41886 6843 IDWIEETIASH True NCI_RA007_Epitope_Rep2 1312.62993128056 1312.62882993586 31.235 2 -1.8363482022142101 0.4390198051553118 1.0 ['ENSG00000219073|ENST00000337107|CELA3B', 'ENSG00000142789|ENST00000290122|CELA3A'] 62533 21195 LLTARRKDAKS True H1975_Epitope_Rep2 1257.7517181790897 1257.7500749037902 87.722 3 -1.836533279890764 0.4390446176812075 1.0 ['ENSG00000172809|ENST00000311111|RPL38'] 104959 20901 STHWLEHI True PC9_epitope_Rep4 1021.4981292653699 1021.49702993586 88.554 2 -1.8365876996563566 0.4390446176812075 1.0 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2', 'nc|ENSG00000171100|Q13496-2|MTM1', 'ENSG00000171100|ENST00000370396|MTM1'] 62804 6212 LMGAVSDLCE True H1975_Epitope_Rep3 1036.45691827 1036.45582993586 28.907 2 -1.8366059899467502 0.4390446176812075 1.0 ['nc|ENSG00000114316|Q13107-2|USP4', 'ENSG00000114316|ENST00000265560|USP4', 'ENST00000485450.5_1_3:49315728-49349110:-|nuORF'] 126131 23386 VPERLLGTA True PC9_epitope_Rep6 954.5498304850598 954.54872993586 103.06 2 -1.8366573744692025 0.4390446176812075 1.0 ['ENSG00000100568|ENST00000554659|VTI1B'] 882 11051 ADLRAHRRT True H1975_Epitope_Rep3 1094.6057226517398 1094.6046299358602 47.598 2 -1.8366998236103795 0.43905082046972443 1.0 ['ENSG00000171161|ENST00000306562|ZNF672'] 125681 14721 VMVKVLDSPG True H1975_Epitope_Rep1 1043.5685173243098 1043.56797496793 61.845 1 -1.8369920884120559 0.43911231022700886 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 37834 4303 HDKDLREIQH True NCI_RA007_Epitope_Rep1 1289.64764703337 1289.64601490379 20.848 3 -1.8373252360965964 0.43914197257850507 1.0 ['ENSG00000107295|ENST00000380607|SH3GL2'] 80136 24769 PKKPGVGV True NCI_RA007_Epitope_Rep5 780.4857736765199 780.4852249679301 102.76 1 -1.83734403593818 0.43914197257850507 1.0 ['nc|ENSG00000275066|Q9UMZ2-6|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-9|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-4|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-8|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-3|SYNRG', 'nc|ENSG00000275066|Q9UMZ2-7|SYNRG'] 41273 10687 IAGDTSGDYR True H1975_Epitope_Rep1 1053.47270236317 1053.4716099358602 46.066 2 -1.8373714819203018 0.43914197257850507 1.0 ['ENSG00000138279|ENST00000372921|ANXA7', 'nc|ENSG00000138279|P20073|ANXA7'] 69338 23989 LVPTGPTH True NCI_RA007_Epitope_Rep1 820.4443027873601 820.44320993586 99.284 2 -1.8377188092580337 0.4391875456093408 1.0 ['ENST00000529480.1_1_11:57457792-57467500:+|nuORF', 'nc|ENSG00000156599|Q9C0B5-2|ZDHHC5', 'ENSG00000156599|ENST00000287169|ZDHHC5'] 65651 8519 LSGSRHPSL True PC9_epitope_Rep4 952.50902830224 952.50792993586 40.245 2 -1.8377426635233605 0.4391875456093408 1.0 ['ENST00000372903.6_1_6:42531844-42531958:+|nuORF'] 71181 24722 MFHHGVPI True PC9_epitope_Rep2 936.4639926861199 936.46288993586 100.77 2 -1.8377942744654447 0.4391937463374722 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 137939 8470 YPSRSSSGL True PC9_epitope_Rep5 952.4614094034799 952.46030993586 37.522 2 -1.8378790723942782 0.43919509093924486 1.0 ['ENST00000563829.5_1_15:75145788-75146232:-|nuORF'] 109950 16780 THSGERPFNC True H1975_Epitope_Rep2 1146.4876412346598 1146.48598490379 69.789 3 -1.8379004433311967 0.43919509093924486 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 110891 14048 TLAHEAAP True H1975_Epitope_Rep2 808.4079172786398 808.40682993586 59.188 2 -1.838008895706331 0.43920129137828096 1.0 ['ENSG00000007047|ENST00000262891|MARK4', 'nc|ENSG00000007047|Q96L34-2|MARK4'] 35924 13786 GVAPFNPG True PC9_epitope_Rep3 757.3758888743699 757.37478993586 58.106 2 -1.838233571258329 0.4392296040775261 1.0 ['ENST00000439351.5_2_3:186285284-186285335:+|nuORF'] 90530 24358 RKEPRKIIAT True PC9_epitope_Rep4 1210.7509899030997 1210.7498899358602 102.18 2 -1.8383250491598853 0.43923580399787726 1.0 ['nc|ENSG00000114867|Q04637-4|EIF4G1', 'nc|ENSG00000114867|Q04637-3|EIF4G1', 'ENSG00000114867|ENST00000346169|EIF4G1', 'nc|ENSG00000114867|Q04637-8|EIF4G1', 'nc|ENSG00000114867|Q04637-9|EIF4G1', 'nc|ENSG00000114867|Q04637-5|EIF4G1', 'ENST00000442406.5_1_3:184038690-184052693:+|nuORF', 'nc|ENSG00000114867|Q04637-6|EIF4G1', 'nc|ENSG00000114867|Q04637-7|EIF4G1'] 12015 6869 DICEEIKVV True PC9_epitope_Rep1 1046.53179746242 1046.5307099358602 31.226 2 -1.8385195836300359 0.43923714759535654 1.0 ['ENSG00000205359|ENST00000506729|SLCO6A1'] 69605 2665 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 13.705 3 -1.8385240423931186 0.43923714759535654 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 108674 11559 TELLLIGAPL True NCI_RA007_Epitope_Rep1 1038.6324974798597 1038.6314099358601 48.931 2 -1.8386491883766818 0.43924954672091276 1.0 ['nc|ENSG00000005844|P20701-3|ITGAL', 'ENSG00000005844|ENST00000356798|ITGAL', 'nc|ENSG00000005844|P20701-2|ITGAL'] 33998 22419 GNGVLQVS True PC9_epitope_Rep3 772.40791727864 772.40682993586 91.512 2 -1.8386613616155794 0.43924954672091276 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 90422 24014 RIPRPLRAHPG True PC9_epitope_Rep2 1268.7578066190397 1268.75670993586 97.865 2 -1.8389083974795786 0.43926680154334297 1.0 ['ENST00000380094.9_1_10:5931597-5931837:-|nuORF'] 41666 19033 IDKLRFPTK True PC9_epitope_Rep6 1116.66552894364 1116.6644299358602 85.852 2 -1.8389873365099239 0.439268144381184 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'ENSG00000184304|ENST00000331968|PRKD1'] 120607 20902 VGAGHGAG True PC9_epitope_Rep6 624.29797290684 624.29742496793 93.172 1 -1.8390123971963726 0.439268144381184 1.0 ['ENSG00000127526|ENST00000595753|SLC35E1'] 100778 23102 SLRQQLRER True PC9_epitope_Rep3 1184.6738022115599 1184.6727099358602 94.13 2 -1.8391062161776233 0.4392694871596449 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 58717 24709 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 106.85 2 -1.8391116119888262 0.4392694871596449 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 95761 14011 SCQTDDTWRTE True H1975_Epitope_Rep1 1340.5302938922798 1340.5291899358601 59.054 2 -1.8393734386563172 0.43928674080788876 1.0 ['ENSG00000121741|ENST00000610343|ZMYM2'] 96066 9274 SEAWVPDS True H1975_Epitope_Rep3 889.3817621004499 889.3806699358599 40.666 2 -1.8394565754517678 0.4392934518282708 1.0 ['ENSG00000142039|ENST00000269967|CCDC97'] 61800 12216 LLKMILIK True PC9_epitope_Rep3 970.6612955103399 970.66018993586 52.02 2 -1.8395476103692026 0.4392934518282708 1.0 ['ENSG00000160191|ENST00000291539|PDE9A', 'nc|ENSG00000160191|O76083-12|PDE9A', 'nc|ENSG00000160191|O76083-15|PDE9A', 'nc|ENSG00000160191|O76083-14|PDE9A', 'nc|ENSG00000160191|O76083-5|PDE9A', 'nc|ENSG00000160191|O76083-2|PDE9A', 'nc|ENSG00000160191|O76083-13|PDE9A', 'nc|ENSG00000160191|O76083-8|PDE9A', 'nc|ENSG00000160191|O76083-6|PDE9A', 'nc|ENSG00000160191|O76083-16|PDE9A', 'nc|ENSG00000160191|O76083-10|PDE9A', 'ENST00000470987.5_1_21:44117526-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-3|PDE9A', 'nc|ENSG00000160191|O76083-4|PDE9A', 'nc|ENSG00000160191|O76083-11|PDE9A', 'nc|ENSG00000160191|O76083-9|PDE9A', 'ENST00000489319.5_1_21:44178904-44195400:+|nuORF', 'nc|ENSG00000160191|O76083-7|PDE9A', 'ENST00000466472.1_1_21:44185493-44188444:+|nuORF'] 74482 23371 NKKSSLKG True NCI_RA007_Epitope_Rep4 860.5079656730799 860.50686993586 101.46 2 -1.8396812650470191 0.4392934518282708 1.0 ['PDXDC1-NAV2|1|fusion', 'PDXDC1-NAV2|2|fusion', 'nc|ENSG00000166833|Q8IVL1-4|NAV2', 'PDXDC1-NAV2|3|fusion', 'nc|ENSG00000166833|Q8IVL1-8|NAV2', 'nc|ENSG00000166833|Q8IVL1-9|NAV2', 'nc|ENSG00000166833|Q8IVL1-10|NAV2', 'nc|ENSG00000166833|Q8IVL1-13|NAV2', 'nc|ENSG00000166833|Q8IVL1-12|NAV2', 'nc|ENSG00000166833|Q8IVL1-11|NAV2', 'ENSG00000166833|ENST00000349880|NAV2', 'nc|ENSG00000166833|Q8IVL1-2|NAV2', 'nc|ENSG00000166833|Q8IVL1|NAV2'] 116140 21513 TVTASDQAVN True H1975_Epitope_Rep1 1004.47745339044 1004.47634993586 89.401 2 -1.8397672143474721 0.4392934518282708 1.0 ['ENSG00000197410|ENST00000357232|DCHS2'] 59541 9011 LGQPLPAAR True PC9_epitope_Rep1 921.5396001545299 921.53850993586 39.509 2 -1.8397740631856971 0.4392934518282708 1.0 ['ENST00000558265.5_2_14:103800768-103802173:+|nuORF', 'ENST00000560763.5_2_14:103800597-103802258:+|nuORF'] 38420 27223 HGRAGHHW True PC9_epitope_Rep3 956.44776545836 956.44666993586 112.03 2 -1.839803983900809 0.4392934518282708 1.0 ['ENST00000606525.5_1_20:32250043-32250439:-|nuORF'] 47932 17036 IYYLLLDRKER True NCI_RA007_Epitope_Rep2 1480.8401988303197 1480.83910993586 71.003 2 -1.8398903797220862 0.4392934518282708 1.0 ['nc|ENSG00000160469|Q8TDC3-2|BRSK1', 'ENSG00000160469|ENST00000309383|BRSK1'] 21929 13800 ESHSQKSLFP True PC9_epitope_Rep4 1158.56693710118 1158.5658499358601 60.978 2 -1.8400573489166467 0.4392934518282708 1.0 ['ENST00000372336.3_1_10:81145469-81145733:-|nuORF'] 124615 8834 VLHSHGANR True H1975_Epitope_Rep3 989.51551066501 989.51440993586 38.986 2 -1.8400971999729943 0.4392934518282708 1.0 ['ENSG00000115232|ENST00000397033|ITGA4', 'ENST00000484404.1_1_2:182322441-182339919:+|nuORF', 'nc|ENSG00000115232|P13612-2|ITGA4', 'ITGA4|p.G389Efs*39|1|0.13|ENSG00000115232|chr2:181493336-181493336|G/-|frameshift_variant', 'ENST00000476089.1_1_2:182321937-182323202:+|nuORF', 'ENST00000465522.5_1_2:182322141-182350724:+|nuORF'] 109137 23983 TFLDVKRLRQ True H1975_Epitope_Rep2 1274.7459045226599 1274.74480993586 98.772 2 -1.840135966021525 0.4392934518282708 1.0 ['nc|ENSG00000123473|Q15468|STIL', 'ENSG00000123473|ENST00000371877|STIL'] 125220 13306 VLQPQRVL True PC9_epitope_Rep6 951.5865503469498 951.58544993586 62.837 2 -1.8402645084897036 0.43929479385431636 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 96707 5706 SEQAHLLSLTD True NCI_RA007_Epitope_Rep2 1212.59863115228 1212.5975299358602 26.81 2 -1.8402724370564338 0.43929479385431636 1.0 ['ENST00000446877.5_2_2:190649358-190650191:+|nuORF'] 51896 18177 KKRRHLTPT True NCI_RA007_Epitope_Rep3 1135.69380938015 1135.6927099358602 79.619 2 -1.8404522380239419 0.43930099147793217 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 85106 16041 QIRSQVALMQ True PC9_epitope_Rep3 1172.6335771923598 1172.63194490379 66.851 3 -1.8406242787136045 0.4393071889645415 1.0 ['nc|ENSG00000256463|Q9BXA9-4|SALL3', 'ENSG00000256463|ENST00000537592|SALL3', 'SALL3|p.F649Lfs*5|1|0.44|ENSG00000256463|chr18:78993938-78993938|C/-|frameshift_variant', 'nc|ENSG00000256463|Q9BXA9-3|SALL3', 'nc|ENSG00000256463|Q9BXA9-2|SALL3'] 120686 11064 VGAPSVSF True PC9_epitope_Rep6 762.39120458534 762.39010993586 53.476 2 -1.8407137724939076 0.4393354923568357 1.0 ['ENST00000421433.5_1_2:233595869-233599942:+|nuORF', 'ENST00000429187.5_3_2:233595869-233599942:+|nuORF'] 83769 5210 QEEDMWAGLWQ True NCI_RA007_Epitope_Rep1 1391.58160118915 1391.5805099358602 24.348 2 -1.8407422487251044 0.43934168932511 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 78444 14314 PCIYRNTG True NCI_RA007_Epitope_Rep3 922.43308648066 922.43198993586 63.621 2 -1.8409360007167084 0.4393540828507007 1.0 ['nc|ENSG00000143416|Q13228-3|SELENBP1', 'ENSG00000143416|ENST00000368868|SELENBP1', 'nc|ENSG00000143416|Q13228-4|SELENBP1', 'ENST00000474352.5_1_1:151341776-151342064:-|nuORF', 'ENST00000493560.5_1_1:151341776-151345168:-|nuORF'] 121336 4602 VGHRATAL True PC9_epitope_Rep2 823.46643521427 823.46532993586 23.071 2 -1.8410237442721444 0.4393540828507007 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 60663 11773 LITRGIVYDVT True H1975_Epitope_Rep1 1248.70778767844 1248.7066899358601 50.277 2 -1.8410556732246548 0.43936027940802636 1.0 ['ENST00000593607.1_1_19:54120057-54120405:+|nuORF'] 136183 23772 YGKKKNKR True NCI_RA007_Epitope_Rep3 1020.6192474575598 1020.61814993586 103.03 2 -1.8411711187345976 0.43936161982338445 1.0 ['nc|ENSG00000163935|Q9UHJ3-2|SFMBT1', 'ENSG00000163935|ENST00000394752|SFMBT1'] 29827 19657 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 81.557 2 -1.8412390539170824 0.43936161982338445 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 134373 16534 WSLSYIFFP True H1975_Epitope_Rep1 1158.57498260374 1158.57334490379 68.971 3 -1.8415021590502714 0.4393788682581786 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 112615 14604 TPDIVSRI True PC9_epitope_Rep5 899.50763131991 899.50652993586 61.175 2 -1.8416653894669073 0.4393850642676363 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF', 'ENST00000551743.5_1_14:105849507-105861006:+|nuORF'] 95741 23553 SCEAHNLK True H1975_Epitope_Rep1 900.41235103608 900.41180496793 97.84 1 -1.8417812246869851 0.4393904231453547 1.0 ['ENSG00000092445|ENST00000263798|TYRO3', 'TYRO3|p.G210D|1|0.13|ENSG00000092445|chr15:41564232-41564232|G/A|missense_variant'] 93009 23287 RRRDPRRR True NCI_RA007_Epitope_Rep4 1166.6969376979798 1166.69584993586 101.13 2 -1.8418535091557704 0.4393904231453547 1.0 ['nc|ENSG00000251359|Q96NR7|WWC2-AS2', 'ENST00000578387.1_1_4:184019140-184020019:-|nuORF'] 114692 18397 TSSKGKKGKK True NCI_RA007_Epitope_Rep5 1047.6400424717897 1047.6389499358602 77.573 2 -1.8419109780209815 0.4393904231453547 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 58426 8680 LEVWLSHEG True NCI_RA007_Epitope_Rep3 1068.52400966004 1068.52290993586 41.222 2 -1.8419369367299296 0.4393904231453547 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-3|PCNX3', 'ENST00000439247.2_1_11:65394334-65404446:+|nuORF'] 136184 24933 YGKKKNKR True NCI_RA007_Epitope_Rep5 1020.6192474575598 1020.61814993586 103.4 2 -1.8420109346074802 0.4393904231453547 1.0 ['nc|ENSG00000163935|Q9UHJ3-2|SFMBT1', 'ENSG00000163935|ENST00000394752|SFMBT1'] 101607 23263 SPFCSCLL True H1975_Epitope_Rep2 868.38229677776 868.38118993586 95.951 2 -1.842084913811514 0.4393904231453547 1.0 ['ENST00000334801.7_1_11:118768619-118768991:-|nuORF'] 18463 23683 EKKKYIMLEIK True PC9_epitope_Rep5 1421.8316082925696 1421.8305099358602 96.076 2 -1.8422256925498375 0.4393904231453547 1.0 ['nc|ENSG00000128805|Q7Z5H3-3|ARHGAP22', 'ENSG00000128805|ENST00000249601|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-5|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-2|ARHGAP22', 'nc|ENSG00000128805|Q7Z5H3-4|ARHGAP22'] 80352 17034 PLGGSRIR True NCI_RA007_Epitope_Rep2 854.50863437942 854.50808496793 70.995 1 -1.8422652149316507 0.4393904231453547 1.0 ['ENST00000531502.5_1_8:11710176-11725594:-|nuORF'] 27051 18574 FLNRRRRRER True NCI_RA007_Epitope_Rep4 1457.85522924453 1457.85412993586 80.354 2 -1.8425678278602247 0.43942491518493554 1.0 ['ENSG00000150637|ENST00000582621|CD226'] 48094 26699 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 111.18 3 -1.842572617761528 0.43942491518493554 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 56211 13822 LDPILYYFMA True PC9_epitope_Rep2 1244.61513316356 1244.6140299358601 58.449 2 -1.8427674233410125 0.43942625396439505 1.0 ['ENSG00000078589|ENST00000171757|P2RY10'] 35989 18020 GVCFLRQL True PC9_epitope_Rep1 934.5058574980999 934.5047699358599 74.105 2 -1.8427801116182527 0.43942625396439505 1.0 ['nc|ENSG00000138892|A6PVC2|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 87188 21874 QSLGHRRR True PC9_epitope_Rep4 1008.5689432202 1008.56784993586 92.349 2 -1.8428873748918604 0.43943244856012553 1.0 ['ENST00000283921.4_1_7:27211779-27213458:-|nuORF'] 40750 9312 HTVGPIRRRYS True PC9_epitope_Rep1 1340.74255047772 1340.7409049037901 40.675 3 -1.842995453479184 0.4394337871287129 1.0 ['nc|ENSG00000285708|Q9H334-6|FOXP1', 'nc|ENSG00000285708|Q9H334-3|FOXP1', 'nc|ENSG00000285708|Q9H334-7|FOXP1', 'ENSG00000114861|ENST00000649528|FOXP1', 'nc|ENSG00000285708|Q9H334-4|FOXP1', 'nc|ENSG00000285708|Q9H334-8|FOXP1'] 65463 20197 LSFEVFRSP True PC9_epitope_Rep5 1080.56039516876 1080.55928993586 82.733 2 -1.8430201884831598 0.4394337871287129 1.0 ['nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2', 'nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2', 'ENSG00000188559|ENST00000202677|RALGAPA2'] 48107 25493 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 104.68 3 -1.8434159748049652 0.4394841817960816 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 26869 21550 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 89.979 2 -1.8436619517743567 0.4395151488364898 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 52953 23897 KRLLQLPQW True PC9_epitope_Rep2 1180.7080624619598 1180.7069699358601 97.399 2 -1.8437445453709487 0.4395151488364898 1.0 ['ENSG00000153976|ENST00000284110|HS3ST3A1'] 48398 18954 KEDFYLNTGPI True NCI_RA007_Epitope_Rep5 1295.6397676882698 1295.63812490379 79.743 3 -1.843797215552767 0.4395151488364898 1.0 ['ARAP2-PDS5A|1|fusion', 'ENSG00000047365|ENST00000303965|ARAP2'] 136750 16119 YIPKPSTVSHS True NCI_RA007_Epitope_Rep5 1214.62953735774 1214.62844993586 68.73 2 -1.8438017844117374 0.4395151488364898 1.0 ['ENST00000588404.5_1_19:38907704-38910742:-|nuORF'] 69613 26601 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 110.74 3 -1.8438304013240914 0.4395151488364898 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 100775 18197 SLRQQLRER True NCI_RA007_Epitope_Rep3 1184.6738022115599 1184.6727099358602 79.695 2 -1.8439775820502597 0.43952134183397235 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 92250 20928 RQKQNKYPI True NCI_RA007_Epitope_Rep5 1173.66184054553 1173.66019490379 87.5 3 -1.8442432010220882 0.43952753469459915 1.0 ['ENSG00000125772|ENST00000379019|GPCPD1'] 45260 10432 IRWASRWDYIL True H1975_Epitope_Rep1 1477.78301830737 1477.78192993586 45.081 2 -1.8442464396220315 0.43953372741837465 1.0 ['ENSG00000125304|ENST00000376387|TM9SF2'] 79138 9105 PGAPGGKG True PC9_epitope_Rep1 639.33402406239 639.3334749679301 39.874 1 -1.844442845136223 0.4395682101936867 1.0 ['nc|ENSG00000168542|P02461-2|COL3A1', 'ENSG00000168542|ENST00000304636|COL3A1', 'COL4A4|p.G885Rfs*12|1|0.36|ENSG00000081052|chr2:227056008-227056009|-/T|frameshift_variant', 'ENSG00000081052|ENST00000396625|COL4A4'] 34084 16963 GNVTSLGYRKY True PC9_epitope_Rep6 1256.6513354314798 1256.6502299358601 77.794 2 -1.8447210094812307 0.4395682101936867 1.0 ['nc|ENSG00000186448|O14709-2|ZNF197'] 64235 16874 LQKLQQKAHQ True NCI_RA007_Epitope_Rep3 1220.69895433024 1220.6978499358602 74.246 2 -1.8448141158557434 0.43959164282005103 1.0 ['JMY|p.R607H|1|0.21|ENSG00000152409|chr5:79300802-79300802|G/A|missense_variant'] 38455 23204 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 95.714 2 -1.8448343472127857 0.43959164282005103 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 65129 13209 LSDPSWRLI True PC9_epitope_Rep1 1085.58694426977 1085.58584993586 55.672 2 -1.8449648011087882 0.43961021742973305 1.0 ['ENST00000393085.3_1_7:135613585-135613720:-|nuORF'] 46332 13465 ITFPDGRSL True PC9_epitope_Rep3 1004.5290950404799 1004.52798993586 56.843 2 -1.8450964711915934 0.43961021742973305 1.0 ['ENSG00000186160|ENST00000334194|CYP4Z1'] 126734 21090 VPRYQKFP True PC9_epitope_Rep1 1033.5709002828098 1033.5703749679299 85.952 1 -1.8451521396053763 0.43961021742973305 1.0 ['ENSG00000110697|ENST00000356404|PITPNM1', 'nc|ENSG00000110697|O00562-2|PITPNM1', 'ENST00000527370.5_1_11:67259506-67263940:-|nuORF'] 36710 18975 GVMWRSPWEPL True PC9_epitope_Rep2 1356.6648773206398 1356.66376993586 78.352 2 -1.8453035599621268 0.4396115518041408 1.0 ['ENST00000409594.5_1_2:220073936-220074341:+|nuORF'] 48136 26177 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 109.09 3 -1.8453057671787338 0.4396115518041408 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 94106 22422 RWECSHRLC True H1975_Epitope_Rep3 1188.5280665779999 1188.52642490379 93.727 3 -1.8454358101153165 0.43961288611958105 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S3673Afs*24|1|0.28|ENSG00000117983|chr11:1247893-1247893|C/-|frameshift_variant', 'ENST00000525715.5_1_11:1244314-1260349:+|nuORF'] 133852 23598 WLYNRLLHKF True PC9_epitope_Rep4 1388.7717253476796 1388.77006490379 99.076 3 -1.8455255353939148 0.43961288611958105 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 131218 25942 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 110.02 2 -1.8456465774819497 0.43964117237645967 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 10265 15153 CGGGEKTR True NCI_RA007_Epitope_Rep4 806.3704862241 806.36938993586 65.87 2 -1.845722999179101 0.4396451730499431 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant'] 72257 23045 MSARVRTSHL True PC9_epitope_Rep5 1156.61351045412 1156.6124099358601 93.633 2 -1.8457467132182257 0.4396451730499431 1.0 ['ENST00000238714.7_1_2:60988922-60995939:+|nuORF'] 9507 22122 AWKALMAA True PC9_epitope_Rep6 860.4578446765199 860.45674993586 98.034 2 -1.8458481187506894 0.4396451730499431 1.0 ['ENST00000263026.9_1_16:22217912-22237237:+|nuORF'] 120729 10342 VGATGSGQ True NCI_RA007_Epitope_Rep2 675.31876792107 675.3182149679301 44.818 1 -1.8458549000052495 0.4396451730499431 1.0 ['ENST00000418880.1_1_3:38169275-38173454:-|nuORF', 'ENST00000411549.5_1_3:38167983-38173454:-|nuORF'] 117088 4073 TYRFKQCQYLF True PC9_epitope_Rep2 1495.7282058531898 1495.72654490379 20.94 3 -1.8458572549680976 0.4396451730499431 1.0 ['ENST00000558942.5_1_15:89193512-89193848:+|nuORF'] 81453 17965 PQKRWDGP True PC9_epitope_Rep1 982.4984636185397 982.49736993586 73.895 2 -1.8459345707027135 0.4396451730499431 1.0 ['ENST00000006777.10_1_7:75518025-75518175:+|nuORF'] 20480 21543 EPSTIPPCRR True PC9_epitope_Rep2 1154.5866269999399 1154.58607496793 88.332 1 -1.8459968657860792 0.4396478398709777 1.0 ['ENST00000537165.5_1_12:109907385-109907427:-|nuORF'] 71190 24981 MFKRQIIQR True H1975_Epitope_Rep2 1218.7019315357 1218.70027490379 102.67 3 -1.8460574667022225 0.4396478398709777 1.0 ['nc|ENSG00000166762|Q96P56-3|CATSPER2', 'ENST00000469461.5_1_15:43927692-43940259:-|nuORF', 'nc|ENSG00000166762|Q96P56-2|CATSPER2', 'ENSG00000166762|ENST00000396879|CATSPER2'] 16886 22922 EFYKIIPLL True PC9_epitope_Rep2 1134.6688829885798 1134.6677899358601 93.674 2 -1.8460987846454493 0.4396478398709777 1.0 ['ENSG00000143819|ENST00000272167|EPHX1'] 72699 25436 MYLLPFIPII True PC9_epitope_Rep1 1218.70863962558 1218.70754993586 102.82 2 -1.846100393820042 0.4396478398709777 1.0 ['ENST00000447282.5_1_12:53874080-53874200:+|nuORF'] 24817 24423 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 101.41 2 -1.8465129237287132 0.43968764151672796 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 64401 6114 LQQYRQDQRDG True NCI_RA007_Epitope_Rep2 1405.6698390299298 1405.6687499358602 28.388 2 -1.8465779993639557 0.43968764151672796 1.0 ['GCN1L1-CCND2|1|fusion', 'ENSG00000118971|ENST00000261254|CCND2'] 114766 7143 TSYAVWATS True PC9_epitope_Rep3 984.4552613938799 984.45416993586 32.488 2 -1.8467420818718179 0.43968764151672796 1.0 ['ENSG00000109736|ENST00000355443|MFSD10'] 27532 19900 FPGTLDSKL True PC9_epitope_Rep2 976.5229470308799 976.52184993586 81.94 2 -1.846824811852594 0.43968764151672796 1.0 ['nc|ENSG00000135315|Q5TB80-2|CEP162', 'ENSG00000135315|ENST00000403245|CEP162'] 121910 23673 VGPLEVNVRSR True PC9_epitope_Rep1 1224.6938689498 1224.69276993586 95.849 2 -1.8469607708362143 0.43968764151672796 1.0 ['ENSG00000138615|ENST00000261883|CILP'] 91979 22342 RPRATRFK True PC9_epitope_Rep4 1030.6148307834599 1030.6137299358602 94.176 2 -1.8470117143114262 0.43968764151672796 1.0 ['ENST00000370544.9_1_1:87794674-87797922:+|nuORF'] 73588 3126 NGEDRQDSRR True PC9_epitope_Rep4 1231.56537396139 1231.56373490379 17.847 3 -1.8470494386115557 0.43968764151672796 1.0 ['ENST00000487698.5_2_2:198288691-198299763:-|nuORF'] 99973 22645 SLIRKKFRMM True PC9_epitope_Rep2 1308.7522528563998 1308.7506149037902 92.598 3 -1.8471552646186433 0.43968764151672796 1.0 ['nc|ENSG00000133302|Q9BQI6-2|SLF1'] 53008 24837 KRRKTSVF True NCI_RA007_Epitope_Rep5 1020.6192474575599 1020.61814993586 103.02 2 -1.8472144573958456 0.43968764151672796 1.0 ['ENST00000539976.1_1_16:89981432-89981549:+|nuORF'] 85633 25127 QLPQHPLT True PC9_epitope_Rep2 932.50796567308 932.50686993586 102.32 2 -1.8472642234780017 0.43968764151672796 1.0 ['ENSG00000127124|ENST00000372583|HIVEP3', 'nc|ENSG00000127124|Q5T1R4-2|HIVEP3'] 137280 25487 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 103.48 1 -1.8473526754893406 0.43969383021493735 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 87635 6732 QTYPNSTVY True PC9_epitope_Rep1 1071.48728979815 1071.48618993586 30.699 2 -1.8477981950705018 0.43970887082523413 1.0 ['DCBLD2|p.C99Y|1|0.12|ENSG00000057019|chr3:98881677-98881677|C/T|missense_variant'] 85575 25692 QLLLLLQA True PC9_epitope_Rep1 910.5851533646199 910.5846049679301 103.86 1 -1.847944230294989 0.43970887082523413 1.0 ['ENST00000579329.1_1_17:61776101-61776257:-|nuORF'] 80093 14520 PKGRCGGP True H1975_Epitope_Rep2 770.3857423654199 770.38519496793 61.009 1 -1.848091130066248 0.43970887082523413 1.0 ['ENST00000215829.7_1_22:24951687-24951834:+|nuORF'] 133851 24330 WLYNRLLHKF True PC9_epitope_Rep2 1388.7717253476796 1388.77006490379 99.126 3 -1.8481180385201155 0.43970887082523413 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 32285 18001 GFSCYCPL True PC9_epitope_Rep6 888.3509966494798 888.34988993586 81.868 2 -1.848141695718808 0.43970887082523413 1.0 ['ENST00000315970.11_1_12:58114859-58115021:+|nuORF'] 48566 17150 KEHLDTLNKKK True NCI_RA007_Epitope_Rep3 1352.7775985737596 1352.77650993586 75.342 2 -1.8482533798854215 0.43970887082523413 1.0 ['ENSG00000163029|ENST00000448223|SMC6', 'nc|ENSG00000163029|Q96SB8-2|SMC6'] 109106 6365 TFGGLGSL True PC9_epitope_Rep4 750.39120458534 750.39010993586 31.564 2 -1.8484367542533051 0.43971639038289506 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 75223 9869 NPIFWEEVS True H1975_Epitope_Rep3 1119.5236753068698 1119.52256993586 42.99 2 -1.8484552193512416 0.43971639038289506 1.0 ['nc|ENSG00000123453|Q9UL12-2|SARDH', 'ENSG00000123453|ENST00000439388|SARDH'] 93747 22857 RTRRTSRV True PC9_epitope_Rep5 1030.6108080321799 1030.60970993586 92.917 2 -1.84861984173945 0.43971639038289506 1.0 ['ENST00000370192.7_1_1:98348914-98386471:-|nuORF'] 114689 17845 TSSKGKKGKK True NCI_RA007_Epitope_Rep5 1047.6400424717897 1047.6389499358602 75.438 2 -1.8489910272620576 0.4397446658126077 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 97350 22316 SFWSSTVTT True H1975_Epitope_Rep1 1014.46582607758 1014.46472993586 92.849 2 -1.8490614472431954 0.43975085312924495 1.0 ['ENSG00000112159|ENST00000369393|MDN1', 'MDN1|p.L4236Pfs*9|1|0.31|ENSG00000112159|chr6:89675508-89675518|CTGTCGGACGA/-|frameshift_variant'] 123579 9338 VIISSTQPVL True NCI_RA007_Epitope_Rep2 1055.62266107215 1055.6215699358602 40.93 2 -1.8491957474996659 0.43977912755383763 1.0 ['ENST00000490853.5_1_1:1255198-1259988:-|nuORF'] 22694 8474 ETVGAVVYAEV True H1975_Epitope_Rep1 1135.57610480255 1135.5750099358602 37.525 2 -1.8493004707032905 0.43980346693165506 1.0 ['ENST00000610253.5_1_11:108042863-108061204:-|nuORF', 'ENSG00000149308|ENST00000278612|NPAT'] 58576 7906 LFEISKFYLKD True NCI_RA007_Epitope_Rep2 1401.75440351769 1401.75274490379 35.386 3 -1.84946655005746 0.43980346693165506 1.0 ['ENSG00000172167|ENST00000305949|MTBP'] 74315 10027 NILEPFCLAN True NCI_RA007_Epitope_Rep4 1132.5586809165998 1132.55758993586 45.412 2 -1.849483952375362 0.43980346693165506 1.0 ['ENSG00000118961|ENST00000237822|LDAH', 'nc|ENSG00000118961|Q9H6V9-2|LDAH', 'nc|ENSG00000118961|Q9H6V9-4|LDAH', 'nc|ENSG00000118961|Q9H6V9-3|LDAH'] 10235 5725 CFIYLSKPGQW True NCI_RA007_Epitope_Rep4 1340.6587293110397 1340.65762993586 28.634 2 -1.8495312382435298 0.43980346693165506 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 5491 11318 AMPSGSHS True NCI_RA007_Epitope_Rep5 772.3173880220802 772.31628993586 50.182 2 -1.8496893241695227 0.43980346693165506 1.0 ['ENST00000424460.1_1_7:8380649-8382766:+|nuORF', 'ENST00000435967.1_1_7:8380649-8380892:+|nuORF'] 31190 24363 GDGSPCPV True H1975_Epitope_Rep1 730.29558994834 730.29504496793 101.03 1 -1.8497828628785846 0.43980346693165506 1.0 ['ENST00000461408.2_1_15:59041051-59041905:-|nuORF'] 137281 25905 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 105.39 1 -1.8497879275472469 0.43980346693165506 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 27961 10241 FQSHYFHRDWL True H1975_Epitope_Rep1 1534.7105816430999 1534.7094899358601 44.335 2 -1.8500078146201293 0.43980346693165506 1.0 ['ENST00000585803.1_1_18:57863810-57864818:+|nuORF'] 109102 7510 TFGGLGSL True PC9_epitope_Rep1 750.39120458534 750.39010993586 33.706 2 -1.8500341684072215 0.43980346693165506 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 95914 9534 SDVERLER True H1975_Epitope_Rep1 1002.5094222250599 1002.50832993586 41.595 2 -1.8500605338027767 0.43980346693165506 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000494465.5_1_2:242611409-242611676:+|nuORF', 'ENST00000475693.1_1_2:242607884-242611676:+|nuORF'] 61104 22771 LLCRPGWSIVA True PC9_epitope_Rep6 1213.6641490446502 1213.66304993586 100.68 2 -1.8501392491585187 0.43980346693165506 1.0 ['ENST00000452360.6_1_4:942397-950358:+|nuORF'] 93676 19191 RTILYQFSRA True PC9_epitope_Rep2 1253.68805529337 1253.6869499358602 79.19 2 -1.8503345148323311 0.43980346693165506 1.0 ['nc|ENSG00000163625|Q8IZQ1-2|WDFY3', 'ENSG00000163625|ENST00000295888|WDFY3', 'WDFY3|p.D3006Rfs*25|1|0.49|ENSG00000163625|chr4:84692918-84692919|-/T|frameshift_variant'] 126670 18087 VPRGRKGS True NCI_RA007_Epitope_Rep5 855.50388335215 855.5033349679301 76.37 1 -1.8503623931601711 0.43980346693165506 1.0 ['nc|ENSG00000160271|Q12967-5|RALGDS'] 32458 14889 GGHGRGAR True NCI_RA007_Epitope_Rep4 766.3946672563399 766.39356993586 64.734 2 -1.8503651555321479 0.43980346693165506 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 55755 8014 LDEAQERSV True H1975_Epitope_Rep2 1045.50400249145 1045.50290993586 35.774 2 -1.8504095048656848 0.43980346693165506 1.0 ['ENSG00000144045|ENST00000404568|DQX1', 'nc|ENSG00000144045|Q8TE96-3|DQX1', 'DQX1|p.L288Ffs*74|1|0.15|ENSG00000144045|chr2:74523490-74523490|C/-|frameshift_variant', 'ENST00000473508.1_1_2:74750418-74753390:-|nuORF', 'nc|ENSG00000144045|Q8TE96-2|DQX1', 'ENST00000495597.1_1_2:74751010-74751370:-|nuORF'] 10957 13417 DCDRTSGQ True NCI_RA007_Epitope_Rep5 880.3344946381999 880.3333899358599 58.293 2 -1.8504574956054702 0.43980346693165506 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF'] 134834 13445 WYWRRTLGMQV True NCI_RA007_Epitope_Rep1 1494.75542366054 1494.7543299358601 56.302 2 -1.8505458207190661 0.43980346693165506 1.0 ['ENSG00000163686|ENST00000478253|ABHD6'] 134374 16810 WSLSYIFFP True H1975_Epitope_Rep3 1158.57498260374 1158.57334490379 70.212 3 -1.8506564192022668 0.43980346693165506 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 87022 9871 QSCSRMEDWK True NCI_RA007_Epitope_Rep4 1268.5277917944798 1268.52613490379 44.816 3 -1.8507121039111067 0.43980346693165506 1.0 ['ZNF521|p.G234C|1|0.39|ENSG00000198795|chr18:25227218-25227218|C/A|missense_variant'] 128857 8655 VSSLVSNLL True NCI_RA007_Epitope_Rep4 930.53859709502 930.53750993586 40.075 2 -1.8507493525026835 0.43980346693165506 1.0 ['nc|ENSG00000217128|Q8TF40-3|FNIP1', 'ENSG00000217128|ENST00000510461|FNIP1'] 25501 5705 FEQAGQKYWGP True NCI_RA007_Epitope_Rep2 1309.6091362663296 1309.60802993586 26.806 2 -1.8508503820223905 0.4398047961842512 1.0 ['AP2A2-EPS8L2|1|fusion', 'AP2A2-EPS8L2|2|fusion', 'ENST00000527832.5_1_11:724661-726978:+|nuORF', 'nc|ENSG00000177106|Q9H6S3-2|EPS8L2', 'ENST00000531393.5_1_11:721935-726978:+|nuORF', 'ENST00000526909.5_1_11:710402-726978:+|nuORF', 'ENSG00000177106|ENST00000318562|EPS8L2', 'nc|ENSG00000177106|Q9H6S3-3|EPS8L2'] 60802 25368 LKIELYKKTK True PC9_epitope_Rep5 1262.7962087600197 1262.7951099358602 102.79 2 -1.8510142102648726 0.4398047961842512 1.0 ['nc|ENSG00000138336|Q8NFU7-4|TET1'] 109272 12239 TGCCCACP True H1975_Epitope_Rep2 756.2063236450799 756.2057749679301 52.16 1 -1.8510921915977014 0.4398220220153909 1.0 ['ENST00000525225.1_3_11:904829-908262:-|nuORF'] 117773 23461 VALLVMPW True PC9_epitope_Rep4 927.52519596035 927.52464496793 98.531 1 -1.851192657484859 0.43982335081424234 1.0 ['ENSG00000169676|ENST00000304374|DRD5'] 64234 17842 LQKLQQKAHQ True NCI_RA007_Epitope_Rep2 1220.69895433024 1220.6978499358602 74.142 2 -1.85125601509318 0.43982335081424234 1.0 ['JMY|p.R607H|1|0.21|ENSG00000152409|chr5:79300802-79300802|G/A|missense_variant'] 90649 18480 RKKRFEKQ True NCI_RA007_Epitope_Rep3 1118.6672602791398 1118.6661699358601 80.868 2 -1.8513081535037783 0.4398295354177707 1.0 ['ENSG00000164695|ENST00000297265|CHMP4C'] 49302 15753 KHRHQTKK True NCI_RA007_Epitope_Rep4 1061.6206444398902 1061.61954993586 68.415 2 -1.8514319071235201 0.43983571988473896 1.0 ['nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'SLC4A4|p.K1022Rfs*37|1|0.14|ENSG00000080493|chr4:71560215-71560215|G/-|frameshift_variant', 'ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-3|SLC4A4'] 47047 25625 IVSRIQRYC True H1975_Epitope_Rep3 1136.6124478249599 1136.61134993586 106.65 2 -1.851486249557266 0.43985427246632813 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF'] 14778 5770 DWLSHYWMPKW True H1975_Epitope_Rep1 1547.7019911053499 1547.70088993586 27.265 2 -1.8514988340751224 0.43985427246632813 1.0 ['nc|ENSG00000070669|P08243-3|ASNS', 'nc|ENSG00000070669|P08243-2|ASNS', 'ENSG00000070669|ENST00000394308|ASNS'] 111992 8985 TLSPAAVH True H1975_Epitope_Rep2 794.42865272322 794.42810496793 39.515 1 -1.851537565798862 0.43985427246632813 1.0 ['CNNM1|p.P888H|1|0.15|ENSG00000119946|chr10:99388290-99388290|C/A|missense_variant'] 40506 23521 HSFSIPET True NCI_RA007_Epitope_Rep5 916.42904664604 916.4279499358599 97.787 2 -1.8516274320156214 0.43986045638710103 1.0 ['ENSG00000165164|ENST00000378653|CFAP47', 'nc|ENSG00000165164|Q6ZTR5-6|CFAP47'] 48070 1944 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 10.083 3 -1.8518080907489969 0.4398913739429934 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 74316 9801 NILERTMILLF True NCI_RA007_Epitope_Rep1 1361.7740934164501 1361.77298993586 42.126 2 -1.8519138189577586 0.4398913739429934 1.0 ['ARMCX1|p.N218Mfs*8|1|0.27|ENSG00000126947|chrX:101553581-101553581|A/-|frameshift_variant'] 39308 5568 HLREDSSQT True PC9_epitope_Rep3 1071.49450043691 1071.4934099358602 26.495 2 -1.8519492059436005 0.4398913739429934 1.0 ['ENSG00000132681|ENST00000368081|ATP1A4', 'ATP1A4|p.Y875Tfs*3|1|0.22|ENSG00000132681|chr1:160177549-160177549|C/-|frameshift_variant', 'ATP1A4|p.H510Q|1|0.26|ENSG00000132681|chr1:160171289-160171289|C/A|missense_variant'] 26613 22709 FKLVGKET True NCI_RA007_Epitope_Rep5 920.5331177917599 920.53202993586 94.542 2 -1.8520017409083809 0.4398913739429934 1.0 ['ENST00000491175.1_1_3:138340270-138348004:+|nuORF', 'ENST00000470889.5_1_3:138329799-138348004:+|nuORF', 'nc|ENSG00000158234|Q9NVQ4|FAIM', 'ENSG00000158234|ENST00000360570|FAIM', 'nc|ENSG00000158234|Q9NVQ4-2|FAIM'] 100625 22891 SLQPRPTELKR True PC9_epitope_Rep6 1323.7622828627898 1323.76118993586 101.16 2 -1.8521447925881553 0.4398913739429934 1.0 ['AluJb_dup56968|chr8:98045693-98046014:+|1.235187719160256|0.0002169198745066|12.48|502.0|15|1|anti-sense'] 135407 24770 YDQKVNRF True H1975_Epitope_Rep2 1068.53524305008 1068.5341499358601 101.84 2 -1.852461853517326 0.43990772015806784 1.0 ['ENSG00000102362|ENST00000372989|SYTL4', 'nc|ENSG00000102362|Q96C24-2|SYTL4'] 84380 8787 QGAVGPEV True NCI_RA007_Epitope_Rep3 755.38136817763 755.3808149679301 41.652 1 -1.8525488209047583 0.43990772015806784 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 1977 5596 AEIYPIMDKS True H1975_Epitope_Rep2 1165.5689112471298 1165.5678099358602 26.527 2 -1.8526043115124555 0.43990772015806784 1.0 ['CASP1|p.S339Lfs*16|1|0.12|ENSG00000137752|chr11:105026941-105026942|AG/-|frameshift_variant', 'nc|ENSG00000137752|P29466-2|CASP1', 'ENSG00000137752|ENST00000533400|CASP1', 'nc|ENSG00000137752|P29466-4|CASP1', 'nc|ENSG00000137752|P29466-3|CASP1'] 87257 19001 QSRLRDRALA True NCI_RA007_Epitope_Rep5 1184.67380221156 1184.6727099358602 79.945 2 -1.8528245669194436 0.43990772015806784 1.0 ['PRAMEF12|p.L17R|1|0.39|ENSG00000116726|chr1:12774917-12774917|T/G|missense_variant'] 92899 23729 RRPAQLLPLR True NCI_RA007_Epitope_Rep3 1218.76730867358 1218.7662099358602 102.87 2 -1.8528404319542564 0.43990772015806784 1.0 ['ENST00000517870.1_1_1:53099041-53108627:+|nuORF'] 33329 7382 GLDREQLYWEL True H1975_Epitope_Rep1 1420.6986795467199 1420.6975899358602 33.399 2 -1.8528460266921047 0.43990772015806784 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant'] 358 5632 AAKTVLRP True NCI_RA007_Epitope_Rep3 854.5337864980999 854.53268993586 29.144 2 -1.8529664969957078 0.43990772015806784 1.0 ['nc|ENSG00000090615|Q08378-2|GOLGA3'] 80260 3829 PLDLYSGN True PC9_epitope_Rep4 877.41814760917 877.41704993586 20.898 2 -1.8529943694007052 0.43990772015806784 1.0 ['ENSG00000127080|ENST00000287996|IPPK'] 133256 16584 WEENTPPLGPL True H1975_Epitope_Rep3 1251.6135529404298 1251.61244993586 69.287 2 -1.8531864832826506 0.4399200847719546 1.0 ['ENSG00000225614|ENST00000565624|ZNF469'] 63358 20496 LPESIGAL True NCI_RA007_Epitope_Rep4 798.4487194614599 798.44762993586 88.753 2 -1.8532040918402668 0.4399200847719546 1.0 ['TRAF7-LRRC1|1|fusion', 'ENSG00000137269|ENST00000370888|LRRC1'] 137286 26481 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 108.25 1 -1.8534344306287183 0.43992406348645724 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 86539 26479 QRAPKPLPRV True NCI_RA007_Epitope_Rep1 1160.71421047156 1160.71310993586 109.6 2 -1.8534867630799827 0.43992406348645724 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 42864 16478 IFQLLALLFF True NCI_RA007_Epitope_Rep2 1223.7318175983098 1223.7307299358602 68.824 2 -1.8534987857781018 0.43992406348645724 1.0 ['nc|ENSG00000140254|Q1HG43-3|DUOXA1', 'ENSG00000140254|ENST00000560572|DUOXA1', 'nc|ENSG00000140254|Q1HG43-2|DUOXA1'] 121156 5394 VGGGTREL True PC9_epitope_Rep4 787.41881631551 787.41770993586 27.476 2 -1.8535558123617766 0.43992406348645724 1.0 ['ENST00000587406.5_1_19:19230741-19232328:-|nuORF'] 90857 18898 RKWQQMRPIP True NCI_RA007_Epitope_Rep3 1338.7342942931398 1338.73318993586 82.624 2 -1.8535668973476909 0.43992406348645724 1.0 ['ENSG00000145476|ENST00000378802|CYP4V2'] 53029 23242 KRSKKFID True NCI_RA007_Epitope_Rep5 1020.6080140675198 1020.60690993586 96.671 2 -1.8535945140298575 0.43992406348645724 1.0 ['ENST00000427965.6_1_16:29086353-29124388:+|nuORF', 'nc|ENSG00000085721|Q9NYV6-3|RRN3', 'ENSG00000085721|ENST00000198767|RRN3', 'nc|ENSG00000085721|Q9NYV6-4|RRN3'] 30033 6998 FYIAPSPG True NCI_RA007_Epitope_Rep2 850.4225047136199 850.42140993586 31.842 2 -1.853823529065324 0.43993157110534736 1.0 ['ENST00000532245.5_1_11:57529333-57563148:+|nuORF'] 112483 21948 TNRPIRREQ True PC9_epitope_Rep6 1168.6425020832799 1168.64140993586 97.338 2 -1.8538291073381523 0.43993157110534736 1.0 ['ENST00000256442.9_1_5:68462858-68462948:+|nuORF'] 109929 23567 THRRVRLHRH True PC9_epitope_Rep4 1366.79190071198 1366.7908099358601 98.958 2 -1.853907797896397 0.43993157110534736 1.0 ['ENSG00000178184|ENST00000353265|PARD6G'] 69612 26523 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 110.39 3 -1.8541769443699643 0.43995011478015184 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 85521 21792 QLKKMVSKFL True PC9_epitope_Rep6 1220.73150032848 1220.73040993586 96.715 2 -1.854212469340097 0.43995011478015184 1.0 ['ENST00000438874.6_1_11:18537681-18548363:-|nuORF'] 121331 8854 VGHPLLKTR True PC9_epitope_Rep2 1019.62399848483 1019.62290993586 39.409 2 -1.854221272547296 0.43995011478015184 1.0 ['ENST00000556440.6_2_17:62517606-62518834:+|nuORF'] 137261 24999 YLGKAKPL True NCI_RA007_Epitope_Rep1 888.5432885526399 888.54274496793 103.45 1 -1.854608788617379 0.4399894050259908 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 123884 20222 VKFGKKCWRK True NCI_RA007_Epitope_Rep3 1278.7383170444198 1278.7372099358602 88.105 2 -1.8546584908958137 0.43999558547621676 1.0 ['nc|ENSG00000146094|Q7L591-3|DOK3', 'ENSG00000146094|ENST00000510898|DOK3', 'nc|ENSG00000146094|Q7L591|DOK3'] 15391 6242 EALQVAEHH True PC9_epitope_Rep4 1032.49885754136 1032.49776993586 31.055 2 -1.854801932102505 0.4400017657900255 1.0 ['ENSG00000187535|ENST00000426508|IFT140', 'nc|ENSG00000187535|Q96RY7-2|IFT140', 'ENST00000565298.5_1_16:1574507-1576156:-|nuORF'] 51895 18939 KKRRHLTPT True H1975_Epitope_Rep3 1135.69380938015 1135.6927099358602 79.425 2 -1.8550430789344872 0.44000927009071444 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 91084 24989 RLLPRPGPYL True PC9_epitope_Rep5 1180.7080624619598 1180.7069699358601 101.29 2 -1.8550455096907275 0.44000927009071444 1.0 ['nc|ENSG00000010310|P48546-2|GIPR', 'nc|ENSG00000010310|P48546-3|GIPR', 'ENSG00000010310|ENST00000590918|GIPR'] 45629 6640 ISHIYSPQK True NCI_RA007_Epitope_Rep3 1071.57129420563 1071.57018993586 33.187 2 -1.8551613740810362 0.44000927009071444 1.0 ['ENSG00000218819|ENST00000405799|TDRD15'] 110489 20707 TIPVDSKTF True PC9_epitope_Rep3 1006.53351171458 1006.53240993586 84.925 2 -1.855398507263806 0.44001059415555754 1.0 ['nc|ENSG00000169876|Q685J3-2|MUC17', 'ENSG00000169876|ENST00000306151|MUC17', 'MUC17|p.E645Rfs*16|1|0.2|ENSG00000169876|chr7:101033349-101033349|G/-|frameshift_variant', 'MUC17|p.S1400Kfs*13|1|0.5|ENSG00000169876|chr7:101035612-101035613|-/A|frameshift_variant', 'MUC17|p.V2173Wfs*20|1|0.14|ENSG00000169876|chr7:101037932-101037932|G/-|frameshift_variant'] 121968 6948 VGPTLWRL True PC9_epitope_Rep4 940.5494365622399 940.54832993586 33.962 2 -1.8554023000911197 0.44001059415555754 1.0 ['ENSG00000104998|ENST00000263379|IL27RA'] 55281 16586 LARAGRPA True NCI_RA007_Epitope_Rep1 810.4824196315799 810.48187496793 68.632 1 -1.8557444233488742 0.4400388448083693 1.0 ['ENST00000273261.7_1_3:66550989-66551145:-|nuORF'] 14422 4802 DTLDASPQSF True NCI_RA007_Epitope_Rep5 1079.47711903727 1079.4760299358602 25.158 2 -1.8558850626971337 0.4400587053916268 1.0 ['SPTA1|p.L1977P|1|0.31|ENSG00000163554|chr1:158623173-158623173|A/G|missense_variant'] 139090 7252 YSNIEANESEE True NCI_RA007_Epitope_Rep3 1283.51535502079 1283.51424993586 35.636 2 -1.8560233406983646 0.4400587053916268 1.0 ['ENSG00000126247|ENST00000246533|CAPNS1'] 69433 20427 LVRNFGYPL True PC9_epitope_Rep2 1077.5971150306498 1077.5960099358601 84.001 2 -1.8561892727775575 0.4400587053916268 1.0 ['ENSG00000100324|ENST00000216160|TAB1', 'nc|ENSG00000100324|Q15750-2|TAB1'] 126209 22581 VPGRRASL True PC9_epitope_Rep4 854.50863437942 854.50808496793 95.091 1 -1.856213251431882 0.4400587053916268 1.0 ['nc|ENSG00000092871|Q8WZ73-3|RFFL', 'nc|ENSG00000092871|Q8WZ73-2|RFFL', 'ENSG00000092871|ENST00000394597|RFFL'] 121823 17755 VGNGKGAA True PC9_epitope_Rep6 672.3554877829599 672.35493496793 80.928 1 -1.8562392716640115 0.4400587053916268 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 139765 18207 YVALLILML True NCI_RA007_Epitope_Rep5 1047.6402257125899 1047.6391299358602 76.841 2 -1.8565419081281413 0.4400759189168313 1.0 ['CACNA1C|p.V1368L|1|0.48|ENSG00000151067|chr12:2653862-2653862|G/T|missense_variant'] 98777 15410 SISPALAC True NCI_RA007_Epitope_Rep2 760.37892564948 760.37782993586 64.643 2 -1.8565817302401852 0.4400931320621469 1.0 ['ENST00000524753.4_1_11:18369576-18369654:+|nuORF'] 119897 14784 VEVYRSTK True PC9_epitope_Rep3 980.5290950404799 980.52798993586 62.002 2 -1.8566284887762665 0.4400993103448276 1.0 ['ENSG00000153201|ENST00000283195|RANBP2'] 38992 23272 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 96.797 3 -1.8567845562752843 0.44011652285216163 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 134449 23752 WTIFLFLRWVL True PC9_epitope_Rep3 1492.8594777229198 1492.85782490379 96.647 3 -1.8569320806170444 0.44012270074039744 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 76910 13164 NVLIQESETF True H1975_Epitope_Rep3 1178.58191845898 1178.58082993586 55.886 2 -1.8569729152645942 0.4401240221121275 1.0 ['nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'nc|ENSG00000139220|O75334-7|PPFIA2'] 118353 9836 VDFVLLGSS True PC9_epitope_Rep4 935.4963979298699 935.49530993586 45.483 2 -1.8570568727267194 0.4401240221121275 1.0 ['ENST00000296674.12_1_5:81573566-81574204:-|nuORF'] 103198 23923 SQQGLAEI True PC9_epitope_Rep2 844.4290466460399 844.4279499358599 97.499 2 -1.8571320335934396 0.4401301997131193 1.0 ['ENSG00000144771|ENST00000273286|LRTM1'] 92994 18731 RRQWTSRKR True NCI_RA007_Epitope_Rep3 1272.72756911992 1272.7264699358602 81.91 2 -1.8574835982976077 0.4401584446822831 1.0 ['ENST00000275820.3_1_7:156745216-156745255:+|nuORF'] 53666 25586 KWSILRER True PC9_epitope_Rep5 1086.62981214126 1086.6287099358601 103.72 2 -1.8575485460594496 0.44016462176714627 1.0 ['ENST00000523958.5_1_8:23291828-23307413:-|nuORF', 'nc|ENSG00000197217|Q9Y227-2|ENTPD4', 'ENSG00000197217|ENST00000358689|ENTPD4', 'ENST00000522913.1_1_8:23292193-23294641:-|nuORF'] 25712 17938 FFIRLASLCKR True NCI_RA007_Epitope_Rep4 1352.77509647596 1352.77398993586 77.618 2 -1.8576240158955883 0.4401659421409184 1.0 ['ENST00000359039.4_1_9:21334854-21334980:-|nuORF'] 22504 8333 ETKESLDNRNW True H1975_Epitope_Rep1 1390.6477066030197 1390.6466099358602 36.984 2 -1.8576508842978168 0.4401659421409184 1.0 ['nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4'] 59544 9510 LGQRVWDWWHR True NCI_RA007_Epitope_Rep2 1537.76909957873 1537.7680099358602 41.606 2 -1.8578928874534866 0.44017211893859987 1.0 ['ENST00000583780.1_2_17:18263786-18266854:-|nuORF'] 36566 7077 GVLEEAEFY True PC9_epitope_Rep5 1055.4811417885498 1055.48004993586 32.188 2 -1.8580937355175815 0.4401893287435456 1.0 ['ENSG00000167977|ENST00000301738|KCTD5', 'ENSG00000180901|ENST00000322444|KCTD2', 'nc|ENSG00000100379|Q8N5Z5-2|KCTD17', 'ENSG00000100379|ENST00000403888|KCTD17'] 74705 18221 NLKKLKRTWMP True NCI_RA007_Epitope_Rep4 1413.82786032481 1413.82676993586 78.837 2 -1.8582511426142452 0.44019064851386835 1.0 ['ENST00000507606.2_1_7:135347283-135358947:+|nuORF'] 88804 19940 RDRFTWEGLYN True H1975_Epitope_Rep3 1455.68951184535 1455.6884099358601 83.456 2 -1.8582713261391126 0.44019064851386835 1.0 ['nc|ENSG00000102226|P51784|USP11', 'ENSG00000102226|ENST00000377107|USP11', 'ENST00000469080.5_1_X:47092634-47106681:+|nuORF', 'ENST00000488848.1_1_X:47102801-47104466:+|nuORF'] 103222 23057 SQRQIRKSR True PC9_epitope_Rep2 1157.67413656473 1157.67302993586 94.18 2 -1.8587833476840823 0.440244427041396 1.0 ['ENST00000358053.3_1_20:60831265-60835096:+|nuORF'] 118747 14088 VEDLHRRR True H1975_Epitope_Rep1 1079.59482361487 1079.5937299358602 59.356 2 -1.858826214576302 0.440244427041396 1.0 ['ENST00000372045.5_1_X:109919510-109919585:-|nuORF'] 10452 3297 CMDPFGRS True NCI_RA007_Epitope_Rep3 911.36295831551 911.36240496793 18.407 1 -1.8590760812160956 0.440244427041396 1.0 ['TRPC5|p.L69F|1|0.13|ENSG00000072315|chrX:111952214-111952214|C/A|missense_variant'] 32460 21082 GGHGRGAR True PC9_epitope_Rep3 766.3946672563399 766.39356993586 86.373 2 -1.8592265950829334 0.440244427041396 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 79264 10263 PGHGFCSP True H1975_Epitope_Rep2 800.3275587829601 800.3270049679301 44.482 1 -1.859300872833963 0.440244427041396 1.0 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF'] 59704 12682 LGTPLPEPRSP True NCI_RA007_Epitope_Rep1 1162.6346227381798 1162.63352993586 53.314 2 -1.8593093451621097 0.440244427041396 1.0 ['ENST00000227471.6_3_11:67758663-67759008:-|nuORF'] 11258 18816 DERAQKRQPIR True NCI_RA007_Epitope_Rep1 1395.7694935015497 1395.7683899358601 77.334 2 -1.8594382922658175 0.440244427041396 1.0 ['nc|ENSG00000091428|Q8WZA2-2|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-5|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-4|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-3|RAPGEF4', 'ENSG00000091428|ENST00000397081|RAPGEF4'] 117945 20240 VARLDGRL True PC9_epitope_Rep6 898.5348491272599 898.53374993586 90.537 2 -1.8595884874507755 0.440244427041396 1.0 ['ENSG00000101986|ENST00000218104|ABCD1'] 124949 5896 VLM[Oxidation]EEMILYY True H1975_Epitope_Rep1 1318.6188985950998 1318.6178099358601 27.75 2 -1.8596011035240505 0.440244427041396 1.0 ['nc|ENSG00000196116|Q8NHU6-3|TDRD7', 'nc|ENSG00000196116|Q8NHU6-2|TDRD7', 'ENSG00000196116|ENST00000355295|TDRD7'] 64221 25180 LQKAFAAA True PC9_epitope_Rep3 818.4650382319398 818.46448496793 102.21 1 -1.8596054912906534 0.440244427041396 1.0 ['ENSG00000171060|ENST00000304519|C8orf74'] 138155 19029 YQLQKKRR True NCI_RA007_Epitope_Rep5 1118.6672602791398 1118.6661699358601 80.051 2 -1.859636901015666 0.440244427041396 1.0 ['ENSG00000067334|ENST00000436063|DNTTIP2'] 52926 25377 KRKFAGLLKN True PC9_epitope_Rep2 1173.7346115629696 1173.73297490379 103.29 3 -1.859637646277179 0.440244427041396 1.0 ['ENSG00000139618|ENST00000380152|BRCA2', 'BRCA2|p.R2500Sfs*24|1|0.28|ENSG00000139618|chr13:32356491-32356491|G/-|frameshift_variant', 'BRCA2|p.L1390Ffs*13|1|0.17|ENSG00000139618|chr13:32338518-32338519|-/T|frameshift_variant'] 48116 26788 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 110.48 3 -1.8597434530419859 0.440244427041396 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 27567 23383 FPPGLLHS True H1975_Epitope_Rep1 866.4650382319401 866.46394993586 97.184 2 -1.8597730607856662 0.440244427041396 1.0 ['ENSG00000164841|ENST00000297459|TMEM74'] 75243 27440 NPKQFMTM True PC9_epitope_Rep1 995.4568587003499 995.45576993586 112.23 2 -1.859783089813797 0.440244427041396 1.0 ['nc|ENSG00000167889|Q3V5L5-5|MGAT5B', 'ENSG00000167889|ENST00000569840|MGAT5B', 'nc|ENSG00000167889|Q3V5L5-2|MGAT5B'] 131217 25876 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 109.68 2 -1.8598039417753367 0.440244427041396 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 38464 14550 HGWRYVRV True PC9_epitope_Rep4 1071.57263161831 1071.57152993586 63.879 2 -1.8598235496093136 0.440244427041396 1.0 ['nc|ENSG00000125967|Q96P71-3|NECAB3', 'ENST00000488489.5_1_20:32247922-32262169:-|nuORF'] 42624 20705 IETILVQSWY True H1975_Epitope_Rep2 1250.6546894764201 1250.65358993586 85.748 2 -1.8598284035741297 0.440244427041396 1.0 ['ENSG00000105835|ENST00000222553|NAMPT', 'ENST00000491027.5_1_7:105903822-105925330:-|nuORF', 'ENST00000440465.1_1_10:36811746-36813066:-|nuORF'] 114971 24106 TTIRKYVV True NCI_RA007_Epitope_Rep5 978.5862159937799 978.58510993586 100.13 2 -1.8598371093366484 0.440244427041396 1.0 ['nc|ENSG00000124429|Q8WVV4-1|POF1B', 'ENSG00000124429|ENST00000262753|POF1B', 'nc|ENSG00000124429|Q8WVV4-3|POF1B'] 120779 20275 VGCGFCGK True NCI_RA007_Epitope_Rep2 769.3251162548099 769.3245649679301 83.898 1 -1.859844975555474 0.440244427041396 1.0 ['UGT2A3|p.Q331Tfs*23|1|0.24|ENSG00000135220|chr4:68932633-68932634|-/T|frameshift_variant', 'ENSG00000135220|ENST00000251566|UGT2A3'] 43576 17882 IIFFKFDP True H1975_Epitope_Rep2 1025.5586042636098 1025.55807496793 74.104 1 -1.8598785282785169 0.440244427041396 1.0 ['ENSG00000183597|ENST00000327374|TANGO2', 'ENST00000485715.2_1_22:20024321-20049197:+|nuORF', 'ENST00000484373.5_1_22:20024321-20041279:+|nuORF', 'nc|ENSG00000183597|Q6ICL3-2|TANGO2', 'ENST00000401833.5_1_22:20008736-20024378:+|nuORF', 'ENST00000479679.5_1_22:20008736-20035575:+|nuORF', 'ENST00000475446.5_1_22:20004559-20035575:+|nuORF'] 64670 24598 LRKHREQLVI True PC9_epitope_Rep4 1290.7884380409798 1290.7873499358602 103.11 2 -1.8599100413695375 0.440244427041396 1.0 ['ENSG00000112249|ENST00000369162|ASCC3', 'ASCC3|p.K1243Nfs*48|1|0.2|ENSG00000112249|chr6:100644034-100644034|T/-|frameshift_variant'] 25351 14361 FEGIGVVLPLE True H1975_Epitope_Rep1 1171.64887581999 1171.6477699358602 60.433 2 -1.8599444169549768 0.440244427041396 1.0 ['nc|ENSG00000180773|Q6YBV0-2|SLC36A4', 'ENSG00000180773|ENST00000326402|SLC36A4', 'ENST00000526735.1_1_11:92887247-92899179:-|nuORF'] 122962 22106 VGWLGQMV True PC9_epitope_Rep6 888.45275929608 888.4522149679301 97.973 1 -1.8601510192494723 0.4402567750901691 1.0 ['chr1:89418355-89420191|333|23.34|0.01|11.25|+|0|TE_info:L1PA2,L1PA2_dup101,L1,LINE,donor,-,89412580,89418355|None,GBP1P1|11'] 137275 26694 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 108.51 1 -1.8602095275666568 0.4402567750901691 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 49263 15936 KHDVAHMIV True PC9_epitope_Rep4 1048.54878493924 1048.54768993586 69.224 2 -1.860399092356425 0.4402629489102621 1.0 ['ENST00000550735.6_1_12:112337947-112339324:+|nuORF'] 17993 11903 EIHDHMEQ True PC9_epitope_Rep1 1037.42364399577 1037.4225499358602 50.651 2 -1.86049148128692 0.44026912259416534 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000471834.1_1_6:152657861-152688565:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 72553 17449 MVHRLPVFKR True NCI_RA007_Epitope_Rep4 1281.7492160812897 1281.7481099358602 75.551 2 -1.8609131711793525 0.44030838462047517 1.0 ['nc|ENSG00000197580|Q9BYV7-5|BCO2', 'ENST00000460924.6_1_11:112046255-112064455:+|nuORF', 'ENSG00000197580|ENST00000357685|BCO2'] 69591 1305 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 6.8066 3 -1.8610258080120718 0.4403087951475048 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 104022 7491 SRSNDTLYIP True PC9_epitope_Rep2 1164.57750178488 1164.57640993586 34.185 2 -1.8610920241515871 0.4403087951475048 1.0 ['ENSG00000143387|ENST00000271651|CTSK'] 65936 17597 LSLLHDRSF True PC9_epitope_Rep1 1086.5821932425 1086.58108993586 72.479 2 -1.861186600956135 0.4403087951475048 1.0 ['ENSG00000130640|ENST00000252936|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2', 'nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2'] 92618 25235 RRERRYILPD True PC9_epitope_Rep2 1372.7687652255597 1372.76710490379 102.73 3 -1.8614074176821582 0.4403087951475048 1.0 ['nc|ENSG00000060339|Q8IX12-2|CCAR1', 'ENSG00000060339|ENST00000265872|CCAR1'] 78679 13652 PEDCGQPGS True NCI_RA007_Epitope_Rep4 888.3283466286 888.32724993586 59.732 2 -1.8614141812855505 0.4403087951475048 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 88041 23748 QVTPPRKDAA True PC9_epitope_Rep4 1081.58800689893 1081.5869099358601 99.724 2 -1.861737532400593 0.4403087951475048 1.0 ['nc|ENSG00000183248|Q9H6K5-2|PRR36', 'ENSG00000183248|ENST00000618550|PRR36'] 112757 21869 TPKQASAT True PC9_epitope_Rep2 802.4184819623399 802.41738993586 89.595 2 -1.8618116774562292 0.4403087951475048 1.0 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 133812 3866 WLSQLRFYWEK True NCI_RA007_Epitope_Rep1 1554.7983340183398 1554.79669490379 19.054 3 -1.8619035497700676 0.4403087951475048 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2', 'ENST00000574518.1_1_17:7674005-7689702:+|nuORF'] 109082 9153 TFETSITSKLE True NCI_RA007_Epitope_Rep2 1254.6343479546601 1254.63324993586 40.21 2 -1.8619377415436928 0.4403087951475048 1.0 ['NCKAP5|p.S1441I|1|0.28|ENSG00000176771|chr2:132782489-132782489|C/A|missense_variant'] 85994 19540 QPIKKKIP True PC9_epitope_Rep5 950.6276868829399 950.62713496793 80.214 1 -1.8622271662289998 0.44031142822483704 1.0 ['ENST00000605105.5_1_3:10334350-10334509:+|nuORF'] 17156 16433 EGYENSRC True NCI_RA007_Epitope_Rep5 956.3657947664799 956.36468993586 69.964 2 -1.8622870439971246 0.44031142822483704 1.0 ['ENSG00000175931|ENST00000319380|UBE2O'] 2427 5031 AEQLRGFNA True PC9_epitope_Rep6 1004.5039429217999 1004.50284993586 26.977 2 -1.8623283755823712 0.44031142822483704 1.0 ['ENSG00000196878|ENST00000356082|LAMB3'] 30959 7074 GASSGKSA True NCI_RA007_Epitope_Rep2 663.3187679210699 663.3182149679301 32.141 1 -1.8623445837106734 0.44031142822483704 1.0 ['NEURL4|p.A1299S|1|0.26|ENSG00000215041|chr17:7318326-7318326|C/A|missense_variant'] 18004 9321 EIHRELRPQG True PC9_epitope_Rep5 1233.65781779425 1233.65672993586 40.806 2 -1.8625240720863188 0.44033965593295105 1.0 ['ENSG00000142684|ENST00000374266|ZNF593'] 112103 10430 TLTQPDRAL True PC9_epitope_Rep2 1013.5505587610498 1013.54946993586 45.439 2 -1.862961562963519 0.44036302684104894 1.0 ['ENSG00000197136|ENST00000355703|PCNX3', 'nc|ENSG00000197136|Q9H6A9-2|PCNX3', 'PCNXL3-PACS1|1|fusion'] 120352 5667 VFQGTLAA True NCI_RA007_Epitope_Rep5 805.4334037504898 805.43230993586 28.486 2 -1.8630574665732742 0.44036302684104894 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213', 'ENST00000559070.5_1_17:78261823-78310301:+|nuORF', 'nc|ENSG00000173821|Q63HN8-5|RNF213'] 114395 8700 TSDQEGDSSF True H1975_Epitope_Rep2 1071.39926263939 1071.39816993586 38.427 2 -1.8632561450472267 0.440364342111067 1.0 ['ENSG00000106404|ENST00000308344|CLDN15'] 87450 20593 QTEREKKKKIL True H1975_Epitope_Rep3 1399.8510978671895 1399.85000993586 86.066 2 -1.8632619975986426 0.440364342111067 1.0 ['nc|ENSG00000118194|P45379-11|TNNT2', 'nc|ENSG00000118194|P45379-6|TNNT2', 'nc|ENSG00000118194|P45379-12|TNNT2', 'nc|ENSG00000118194|P45379-9|TNNT2', 'nc|ENSG00000118194|P45379-7|TNNT2', 'nc|ENSG00000118194|P45379-8|TNNT2', 'nc|ENSG00000118194|P45379-10|TNNT2', 'nc|ENSG00000118194|P45379-4|TNNT2', 'nc|ENSG00000118194|P45379-5|TNNT2', 'nc|ENSG00000118194|P45379-3|TNNT2', 'nc|ENSG00000118194|P45379-2|TNNT2', 'ENSG00000118194|ENST00000656932|TNNT2'] 44021 22599 ILKNYNNFYRF True PC9_epitope_Rep2 1490.76703389006 1490.7659299358602 92.427 2 -1.8633249237489258 0.4403705133153223 1.0 ['nc|ENSG00000168491|Q8TBZ0-2|CCDC110', 'ENSG00000168491|ENST00000307588|CCDC110'] 70206 20456 LYLPSFFTY True NCI_RA007_Epitope_Rep4 1149.57464825057 1149.57354993586 88.587 2 -1.8637253421786906 0.4403938822543474 1.0 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 80707 8808 PLQEDILMQN True NCI_RA007_Epitope_Rep4 1199.5856239404297 1199.58452993586 40.69 2 -1.8637301521331706 0.4403938822543474 1.0 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3'] 133743 7126 WLLIHIIFIC True NCI_RA007_Epitope_Rep2 1269.73077205249 1269.72913490379 32.339 3 -1.8638909244216937 0.4404282768582739 1.0 ['ENST00000357103.4_1_12:1895519-1895615:+|nuORF'] 28626 19526 FSRQREKMERR True NCI_RA007_Epitope_Rep4 1521.7946627035697 1521.7935699358602 84.37 2 -1.8639574761941902 0.4404282768582739 1.0 ['ENSG00000229549|ENST00000287721|TSPY8', 'nc|ENSG00000258992|Q01534-2|TSPY1', 'ENSG00000258992|ENST00000451548|TSPY1', 'ENSG00000236424|ENST00000428845|TSPY10', 'ENSG00000228927|ENST00000457222|TSPY3', 'ENSG00000168757|ENST00000320701|TSPY2', 'ENSG00000238074|ENST00000440215|TSPY9', 'ENSG00000233803|ENST00000426950|TSPY4'] 107728 5862 TALLVIIIII True PC9_epitope_Rep5 1080.75221868972 1080.75112993586 27.541 2 -1.864153723195221 0.44044547359135516 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 28052 3410 FRDEMVNRIWQ True NCI_RA007_Epitope_Rep1 1492.7245174550799 1492.72288490379 17.164 3 -1.8642006192184326 0.4404516434927391 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 55812 9812 LDELSLFGP True NCI_RA007_Epitope_Rep1 989.5069626135698 989.50586993586 42.17 2 -1.8643314210463346 0.4404776343208706 1.0 ['ENSG00000115165|ENST00000264192|CYTIP', 'nc|ENSG00000115165|O60759-2|CYTIP'] 90218 19146 RHKSVRRIFLF True NCI_RA007_Epitope_Rep3 1457.87317072445 1457.87152490379 83.613 3 -1.8643985452063407 0.4404776343208706 1.0 ['ENST00000563969.5_1_16:67314567-67322708:+|nuORF', 'nc|ENSG00000196155|Q58EX7-2|PLEKHG4', 'ENSG00000196155|ENST00000379344|PLEKHG4'] 45605 6846 ISGSLEALMEH True H1975_Epitope_Rep3 1185.56997387629 1185.5688699358602 31.291 2 -1.8645092062463873 0.4404776343208706 1.0 ['ENSG00000198915|ENST00000395810|RASGEF1A', 'nc|ENSG00000198915|Q8N9B8-2|RASGEF1A'] 108951 24929 TETRIKGHST True PC9_epitope_Rep3 1128.5887351749197 1128.5876299358601 101.25 2 -1.8645612062100523 0.4404776343208706 1.0 ['ENST00000473406.5_1_1:76252445-76253285:+|nuORF'] 134618 19763 WWFQLLLDIQ True NCI_RA007_Epitope_Rep5 1360.7179584393198 1360.7163149037901 82.929 3 -1.8646333238105652 0.4404776343208706 1.0 ['ENSG00000179300|ENST00000321110|RTL3'] 15583 20509 EATLLLLK True PC9_epitope_Rep4 899.56916894731 899.56806993586 87.037 2 -1.8646557675053188 0.4404776343208706 1.0 ['ENSG00000134250|ENST00000256646|NOTCH2'] 85189 6175 QKELEEVCNP True H1975_Epitope_Rep1 1187.5492384317097 1187.54814993586 28.821 2 -1.864733050106835 0.44047894684616146 1.0 ['ENST00000448737.1_1_X:123338433-123338700:-|nuORF'] 58855 11054 LFRWEQDEIPR True NCI_RA007_Epitope_Rep2 1487.75211210191 1487.75100993586 47.593 2 -1.8648460267062505 0.44047894684616146 1.0 ['ENST00000460981.1_1_6:111714035-111726820:-|nuORF'] 62397 24233 LLRRRMLGD True NCI_RA007_Epitope_Rep3 1128.6549813432798 1128.6538899358602 104.89 2 -1.8649185137359376 0.44049614112458657 1.0 ['ENST00000478749.5_1_1:12079550-12082221:+|nuORF', 'ENST00000235332.5_1_1:12079550-12081702:+|nuORF'] 13519 24886 DPGLRGPLHW True PC9_epitope_Rep2 1146.5934266325398 1146.59179490379 101.4 3 -1.8650975679054522 0.4405021713731455 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 130764 21326 VVDTVLAL True H1975_Epitope_Rep2 828.4956696538799 828.49456993586 88.245 2 -1.865130051123202 0.4405021713731455 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 10420 24362 CLRKTSET True NCI_RA007_Epitope_Rep5 936.4698659122 936.46876993586 101.17 2 -1.8651504146665476 0.4405021713731455 1.0 ['ENSG00000150456|ENST00000382758|EEF1AKMT1'] 68670 24480 LVAWQDQEGVH True H1975_Epitope_Rep3 1280.6149499227602 1280.6138499358601 101.89 2 -1.8652245108297345 0.4405021713731455 1.0 ['ENSG00000079134|ENST00000261600|THOC1', 'ENST00000578529.5_1_18:214628-260326:-|nuORF'] 137266 23885 YLGKAKPL True NCI_RA007_Epitope_Rep3 888.5432885526399 888.54274496793 103.48 1 -1.8653012796903379 0.4405021713731455 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 88768 3071 RDHNFFVFLE True NCI_RA007_Epitope_Rep2 1322.64077074778 1322.6391149037902 16.56 3 -1.8653716453383176 0.4405021713731455 1.0 ['nc|ENSG00000172803|Q86XE0-2|SNX32', 'ENST00000530101.5_1_11:65601488-65618753:+|nuORF', 'ENSG00000172803|ENST00000308342|SNX32', 'ENST00000526972.5_1_11:65617878-65618753:+|nuORF'] 13700 14067 DQGSRGSP True H1975_Epitope_Rep1 802.35694433494 802.3563949679301 59.274 1 -1.8655996828325245 0.4405021713731455 1.0 ['C1QTNF9B|p.P144Lfs*37|1|0.24|ENSG00000205863|chr13:23891862-23891862|C/-|frameshift_variant', 'ENSG00000240654|ENST00000332018|C1QTNF9', 'ENSG00000205863|ENST00000382137|C1QTNF9B'] 134439 26739 WTHGAQGG True H1975_Epitope_Rep3 812.3565504121198 812.35544993586 111.72 2 -1.8656112441278967 0.4405021713731455 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 32578 24138 GHAFPSPL True NCI_RA007_Epitope_Rep5 824.41808803952 824.41698993586 100.25 2 -1.8656145424591086 0.4405021713731455 1.0 ['ENSG00000149506|ENST00000278853|ZP1'] 29587 22012 FVKIKRDV True PC9_epitope_Rep4 1003.6178504752298 1003.61674993586 92.89 2 -1.8656406798515413 0.4405021713731455 1.0 ['ENST00000254480.9_1_3:47629071-47629152:-|nuORF'] 91783 24497 RPLDRRLIVLG True PC9_epitope_Rep4 1306.8197381692598 1306.81864993586 102.71 2 -1.865718313329001 0.4405021713731455 1.0 ['chr1:43531090-43545031|202|11.04|0.32|5.1|+|1|PTPRF,PTPRF|1'] 66096 10144 LSNPAPLL True H1975_Epitope_Rep1 823.48035394291 823.47980496793 43.957 1 -1.8657387448674938 0.4405021713731455 1.0 ['nc|ENSG00000164164|Q01804-5|OTUD4', 'nc|ENSG00000164164|Q01804-3|OTUD4', 'ENSG00000164164|ENST00000447906|OTUD4', 'ENST00000237841.5_1_12:3949907-3950609:+|nuORF', 'ENST00000455611.6_1_4:146049153-146095893:-|nuORF'] 120054 21322 VFFFKVPKLG True PC9_epitope_Rep6 1180.7008518231999 1180.69921490379 94.876 3 -1.8658070606257913 0.4405021713731455 1.0 ['nc|ENSG00000133059|Q6XUX3-3|DSTYK', 'nc|ENSG00000133059|Q6XUX3-2|DSTYK', 'ENSG00000133059|ENST00000367162|DSTYK'] 137263 24649 YLGKAKPL True NCI_RA007_Epitope_Rep2 888.5432885526399 888.54274496793 103.63 1 -1.865948739155075 0.4405021713731455 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 114309 12090 TSAPQEDFFSV True PC9_epitope_Rep5 1226.54553295026 1226.54442993586 51.499 2 -1.8659749777356114 0.4405021713731455 1.0 ['ENSG00000074771|ENST00000159060|NOX3'] 78572 11646 PDQRSQRQGHR True PC9_epitope_Rep4 1363.68174112631 1363.6806499358602 52.555 2 -1.8660714078694545 0.4405021713731455 1.0 ['ENST00000328945.6_1_16:82033487-82033676:-|nuORF'] 43780 17206 IIYWAKED True H1975_Epitope_Rep2 1036.5229470308798 1036.52184993586 71.473 2 -1.8660809204687 0.4405021713731455 1.0 ['nc|ENSG00000091129|Q92823-4|NRCAM', 'nc|ENSG00000091129|Q92823-3|NRCAM', 'nc|ENSG00000091129|Q92823-6|NRCAM', 'nc|ENSG00000091129|Q92823-2|NRCAM', 'ENSG00000091129|ENST00000379028|NRCAM', 'nc|ENSG00000091129|Q92823-5|NRCAM'] 34030 23430 GNLFMILLIRT True PC9_epitope_Rep2 1289.7529640490498 1289.75131490379 95.597 3 -1.8661011048218485 0.4405021713731455 1.0 ['OR5M1|p.C44F|1|0.83|ENSG00000255012|chr11:56613372-56613372|C/A|missense_variant'] 10212 20913 CDVKPFKC True NCI_RA007_Epitope_Rep4 938.4353949797799 938.43428993586 90.631 2 -1.8663371038980416 0.4405021713731455 1.0 ['ZNF366|p.S500C|1|0.43|ENSG00000178175|chr5:72456429-72456429|G/C|missense_variant'] 30686 15377 GALNKSTV True NCI_RA007_Epitope_Rep4 788.43921740692 788.4386649679301 66.823 1 -1.8664124181552242 0.4405021713731455 1.0 ['CD47|p.V146Cfs*18|1|0.19|ENSG00000196776|chr3:108071147-108071148|-/A|frameshift_variant', 'nc|ENSG00000196776|Q08722-2|CD47', 'nc|ENSG00000196776|Q08722-3|CD47', 'nc|ENSG00000196776|Q08722-4|CD47', 'ENSG00000196776|ENST00000361309|CD47'] 21432 23313 ERPKELVRKP True PC9_epitope_Rep3 1250.7459045226597 1250.74426490379 94.953 3 -1.8664707817789803 0.4405021713731455 1.0 ['ENSG00000048162|ENST00000614830|NOP16', 'ENST00000510608.1_1_5:175813700-175815552:-|nuORF', 'nc|ENSG00000048162|Q9Y3C1-3|NOP16', 'nc|ENSG00000048162|Q9Y3C1-2|NOP16'] 62118 22819 LLPCLHSA True PC9_epitope_Rep6 852.45275929608 852.45166993586 100.87 2 -1.866490217270449 0.4405021713731455 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 91255 3094 RLTLCWQELE True PC9_epitope_Rep2 1289.64380752289 1289.64217490379 17.059 3 -1.8664988286942512 0.4405021713731455 1.0 ['ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.L1277Afs*4|1|0.37|ENSG00000214814|chr8:124069468-124069469|TC/-|frameshift_variant'] 57012 19057 LEEEKSRLL True PC9_epitope_Rep1 1115.6186383208699 1115.61754993586 78.094 2 -1.8665955188710137 0.4405021713731455 1.0 ['nc|ENSG00000166140|Q96K21-2|ZFYVE19', 'ENSG00000166140|ENST00000355341|ZFYVE19', 'nc|ENSG00000166140|Q96K21-4|ZFYVE19'] 122732 9862 VGVAYKLD True NCI_RA007_Epitope_Rep3 863.4752685624699 863.47416993586 45.866 2 -1.866599426960368 0.4405021713731455 1.0 ['ENSG00000035687|ENST00000366535|ADSS2', 'ADSS2|p.K373I|1|0.29|ENSG00000035687|chr1:244416031-244416031|T/A|missense_variant'] 57834 7808 LEPYELEN True PC9_epitope_Rep3 1005.46549172441 1005.46438993586 35.025 2 -1.8666346722088274 0.4405021713731455 1.0 ['ENSG00000145708|ENST00000274368|CRHBP'] 64515 15895 LRAQYWFV True NCI_RA007_Epitope_Rep5 1081.5709002828098 1081.5698099358601 67.866 2 -1.8668106489864231 0.4405034829380125 1.0 ['ENSG00000075673|ENST00000381946|ATP12A', 'nc|ENSG00000075673|P54707-2|ATP12A'] 98979 11019 SKIQTHSTTYR True H1975_Epitope_Rep1 1320.67861280848 1320.6775099358601 47.345 2 -1.8668202948753099 0.4405034829380125 1.0 ['ENSG00000143278|ENST00000367412|F13B', 'F13B|p.E337Rfs*24|1|0.32|ENSG00000143278|chr1:197057175-197057175|C/-|frameshift_variant'] 97743 21589 SHGGLDIV True PC9_epitope_Rep3 796.4079172786401 796.40682993586 88.338 2 -1.8670368744196517 0.4405343149680932 1.0 ['nc|ENSG00000124233|P04279-2|SEMG1', 'ENSG00000124233|ENST00000372781|SEMG1'] 32305 16235 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 69.196 2 -1.8670518690697473 0.4405343149680932 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 122705 5366 VGTVIGTG True NCI_RA007_Epitope_Rep5 702.39120458534 702.39065496793 27.33 1 -1.8671029796112608 0.4405343149680932 1.0 ['ENSG00000130487|ENST00000648057|KLHDC7B', 'nc|ENSG00000130487|Q96G42|KLHDC7B'] 118527 4938 VDTISYGEF True PC9_epitope_Rep3 1029.46549172441 1029.46438993586 24.086 2 -1.8671420671197119 0.4405343149680932 1.0 ['ENSG00000158109|ENST00000378344|TPRG1L'] 131648 12066 VWFPGGAF True NCI_RA007_Epitope_Rep3 879.4279244472298 879.42682993586 54.582 2 -1.8671457897354256 0.4405343149680932 1.0 ['nc|ENSG00000159398|Q6NT32-2|CES5A', 'ENSG00000159398|ENST00000290567|CES5A', 'nc|ENSG00000159398|Q6NT32-4|CES5A', 'nc|ENSG00000159398|Q6NT32-3|CES5A', 'ENST00000543561.1_1_16:67034544-67038818:+|nuORF', 'nc|ENSG00000172824|Q5XG92-7|CES4A', 'nc|ENSG00000172824|Q5XG92-6|CES4A', 'nc|ENSG00000172824|Q5XG92-5|CES4A', 'nc|ENSG00000172824|Q5XG92-8|CES4A', 'nc|ENSG00000172824|Q5XG92-2|CES4A', 'ENSG00000172824|ENST00000648724|CES4A'] 62114 24726 LLPCLHSA True PC9_epitope_Rep2 852.45275929608 852.45166993586 100.79 2 -1.867215753227553 0.4405417915711515 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28'] 32461 20433 GGHGRGAR True PC9_epitope_Rep4 766.3946672563399 766.39356993586 86.744 2 -1.8672622787745412 0.4405417915711515 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 64001 17087 LQCCSFLRAI True PC9_epitope_Rep5 1152.57837081536 1152.5772699358602 70.746 2 -1.867317054458094 0.4405417915711515 1.0 ['ENST00000476039.1_1_7:107592454-107592499:-|nuORF'] 63204 17212 LNVRKAAHEAL True NCI_RA007_Epitope_Rep4 1220.6989543302398 1220.6978499358602 74.52 2 -1.8674001336611241 0.4405431021181864 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000560935.1_1_14:24652387-24652645:-|nuORF', 'ENST00000561379.1_1_14:24651787-24652670:-|nuORF'] 38924 24614 HINRSLLALGN True H1975_Epitope_Rep2 1206.6833042660999 1206.68220993586 101.23 2 -1.8674641190519095 0.4405431021181864 1.0 ['ENSG00000196169|ENST00000389916|KIF19', 'nc|ENSG00000196169|Q2TAC6-3|KIF19', 'ENST00000359939.10_1_17:72322488-72347101:+|nuORF', 'nc|ENSG00000196169|Q2TAC6-2|KIF19', 'ENST00000547389.1_1_17:72322488-72347101:+|nuORF'] 8432 14139 ATRWAPTPP True PC9_epitope_Rep2 995.5188647099499 995.51776993586 59.657 2 -1.867565109946282 0.44054441260744986 1.0 ['ENST00000301459.4_1_11:63683878-63684181:-|nuORF'] 32568 12721 GGWPGGHL True NCI_RA007_Epitope_Rep3 779.3714722002699 779.37036993586 57.273 2 -1.8676150522083077 0.44054441260744986 1.0 ['ENST00000309100.7_1_11:65380814-65380982:-|nuORF'] 98972 9283 SKHCFSCV True PC9_epitope_Rep2 909.38369376009 909.38258993586 41.047 2 -1.8678188115275842 0.4405726187721096 1.0 ['L1P3_dup670|chr3:187834774-187835754:-|2.183426136896085|0.060595092738805|5.17|483.0|45|2|anti-sense'] 59509 17909 LGPMAFRVHLG True PC9_epitope_Rep2 1196.64883333368 1196.64772993586 74.192 2 -1.867957733319708 0.4405730027548209 1.0 ['ENST00000520337.1_1_8:104387969-104388098:+|nuORF'] 134376 17254 WSLSYIFFP True NCI_RA007_Epitope_Rep3 1158.57498260374 1158.57334490379 75.758 3 -1.8680494536384131 0.4405730027548209 1.0 ['ENSG00000274386|ENST00000637012|TMEM269'] 102392 7275 SPVSPVKHD True PC9_epitope_Rep5 964.4977949122001 964.49668993586 32.947 2 -1.8680938018196622 0.4405730027548209 1.0 ['chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|90', 'chr15:53523322-53684228|265|18.12|0.04|8.74|-|2|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|79'] 48157 19811 KARTGRIERRP True NCI_RA007_Epitope_Rep4 1338.7956486797398 1338.79454993586 85.629 2 -1.8681020768026826 0.4405730027548209 1.0 ['nc|ENSG00000113303|Q6UX41-2|BTNL8', 'nc|ENSG00000113303|Q6UX41-3|BTNL8', 'nc|ENSG00000113303|Q6UX41-5|BTNL8'] 69608 3275 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 16.631 3 -1.8682942690946802 0.4405730027548209 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 24811 22085 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 92.079 2 -1.868332130747012 0.4405730027548209 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 107844 5498 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 25.978 2 -1.8683879497662907 0.4405730027548209 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 35199 23417 GSEKGIILKFL True NCI_RA007_Epitope_Rep5 1203.7227094665898 1203.72106490379 97.369 3 -1.8686055216555444 0.4405730027548209 1.0 ['SEMA6A|p.L818Afs*10|1|0.23|ENSG00000092421|chr5:116447253-116447255|AGG/T|frameshift_variant', 'ENSG00000092421|ENST00000343348|SEMA6A', 'nc|ENSG00000092421|Q9H2E6-2|SEMA6A', 'ENST00000514316.1_1_5:115814236-115815903:-|nuORF'] 126489 14319 VPMTPGTF True PC9_epitope_Rep2 848.4102257777599 848.4096749679301 60.342 1 -1.8686058103338645 0.4405730027548209 1.0 ['nc|ENSG00000109458|Q13480-2|GAB1', 'ENSG00000109458|ENST00000262994|GAB1'] 10738 22391 CVYPRLHIKKK True PC9_epitope_Rep6 1383.8172956411097 1383.8156549037901 99.096 3 -1.8688629295047519 0.4406245523563959 1.0 ['ANKRD30A|p.P553Hfs*39|1|0.25|ENSG00000148513|chr10:37152070-37152070|C/-|frameshift_variant', 'ENST00000374660.5_1_10:37442527-37442566:+|nuORF', 'ENST00000374660.5_1_10:37490175-37490238:+|nuORF'] 12976 15468 DLPPSQNK True H1975_Epitope_Rep1 897.45559574705 897.45504496793 64.77 1 -1.868885714937044 0.4406245523563959 1.0 ['TJP1|p.P1475L|1|0.28|ENSG00000104067|chr15:29708985-29708985|G/A|missense_variant'] 139547 18568 YTLQNRDRCAP True PC9_epitope_Rep1 1335.63536809751 1335.6342699358602 76.209 2 -1.8689731505341352 0.4406245523563959 1.0 ['ENST00000561623.5_1_16:27472048-27472405:-|nuORF'] 79334 23277 PGKRHWLKV True PC9_epitope_Rep4 1119.6665320031498 1119.6654299358602 97.787 2 -1.8690834114147739 0.4406469667922699 1.0 ['nc|ENSG00000005156|P49916-4|LIG3', 'nc|ENSG00000005156|P49916-3|LIG3', 'nc|ENSG00000005156|P49916-2|LIG3', 'ENSG00000005156|ENST00000378526|LIG3', 'ENST00000593099.5_1_17:33325156-33325826:+|nuORF'] 122459 22914 VGSMLPGLPYH True H1975_Epitope_Rep1 1169.59031539805 1169.58920993586 95.288 2 -1.869086454119876 0.4406469667922699 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 95500 8395 SAPCPVPG True H1975_Epitope_Rep1 726.3370608375 726.33651496793 37.219 1 -1.8691236031956147 0.4406469667922699 1.0 ['ENST00000477234.1_1_22:50905166-50905766:-|nuORF'] 106776 6962 SYFSNAPV True PC9_epitope_Rep2 883.4075829254699 883.40648993586 32.176 2 -1.8691406416948162 0.4406469667922699 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant', 'DHX34|p.S320C|1|0.28|ENSG00000134815|chr19:47355292-47355292|C/G|missense_variant'] 92457 4960 RQWQLKVIENV True PC9_epitope_Rep2 1411.7935829910698 1411.79194490379 24.442 3 -1.8693347928394346 0.4406469667922699 1.0 ['nc|ENSG00000214655|A7E2V4-5|ZSWIM8', 'ENSG00000214655|ENST00000604729|ZSWIM8', 'nc|ENSG00000214655|A7E2V4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-3|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-4|ZSWIM8', 'nc|ENSG00000214655|A7E2V4-2|ZSWIM8'] 104276 8149 SSEEDLLVSW True H1975_Epitope_Rep1 1163.5346339133898 1163.53352993586 36.285 2 -1.8694538880038507 0.4406469667922699 1.0 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1', 'ENST00000454762.1_1_6:43472456-43473590:+|nuORF'] 97648 20924 SHASRHPRIS True H1975_Epitope_Rep2 1146.6006372713 1146.59899490379 86.623 3 -1.8694721284238514 0.4406469667922699 1.0 ['ENSG00000128594|ENST00000249363|LRRC4'] 90047 20043 RGGPVRVA True PC9_epitope_Rep6 810.4824196315799 810.48132993586 89.761 2 -1.8695419157060937 0.4406469667922699 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 120660 21550 VGALSPPP True PC9_epitope_Rep5 736.41194002992 736.41139496793 87.93 1 -1.8695573899961726 0.4406469667922699 1.0 ['ENSG00000198218|ENST00000395443|QRICH1'] 113002 19070 TPSYGRTFK True PC9_epitope_Rep5 1055.5399940773498 1055.5388899358602 78.382 2 -1.8697276333208723 0.44065929223039974 1.0 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|28|2|sense'] 12313 16851 DITQNYKYP True PC9_epitope_Rep4 1140.5451390274397 1140.5440499358601 72.799 2 -1.8697663088336278 0.44065929223039974 1.0 ['nc|ENSG00000166947|P16452-2|EPB42', 'ENSG00000166947|ENST00000441366|EPB42', 'ENST00000567019.1_1_15:43489502-43501706:-|nuORF', 'nc|ENSG00000166947|P16452-3|EPB42'] 38578 17225 HHGLKLQG True NCI_RA007_Epitope_Rep4 888.49298431528 888.49188993586 74.57 2 -1.8700871199224125 0.4406619072800987 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 130373 14172 VTVEYRPI True PC9_epitope_Rep4 975.5389314481899 975.53782993586 62.417 2 -1.87010250638344 0.4406619072800987 1.0 ['ENST00000455183.1_1_3:195408438-195412772:+|nuORF', 'ENST00000440850.5_1_3:195690208-195698253:-|nuORF'] 3087 23681 AGAHALYL True PC9_epitope_Rep4 814.4337381036601 814.43264993586 99.435 2 -1.870125578350787 0.4406619072800987 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3', 'nc|ENSG00000292277|Q9UJ98-2|STAG3'] 3594 23512 AGPGSHRRR True PC9_epitope_Rep1 992.53764309192 992.5370949679301 95.226 1 -1.8701759379776004 0.4406619072800987 1.0 ['AHNAK2|p.Q318H|1|0.19|ENSG00000185567|chr14:104954497-104954497|C/G|missense_variant'] 21371 7901 ERLTFVGEDDI True PC9_epitope_Rep2 1292.62484590012 1292.6237499358601 35.757 2 -1.870457764301072 0.44066806949509196 1.0 ['ENST00000486986.6_1_1:151752280-151755498:-|nuORF', 'nc|ENSG00000182134|Q9Y2W6-3|TDRKH', 'ENSG00000182134|ENST00000368824|TDRKH'] 13337 16629 DMFNNPAT True NCI_RA007_Epitope_Rep5 908.36981751776 908.36872993586 70.729 2 -1.8706392179019367 0.4406781528157222 1.0 ['ENST00000462558.5_1_7:97937677-98030347:-|nuORF', 'ENSG00000006453|ENST00000005260|BAIAP2L1'] 111094 23122 TLEEKRKMT True PC9_epitope_Rep6 1134.60669373818 1134.60505490379 102.04 3 -1.870674670862032 0.4406781528157222 1.0 ['nc|ENSG00000158079|A2A3K4|PTPDC1', 'nc|ENSG00000158079|A2A3K4-2|PTPDC1', 'ENSG00000158079|ENST00000620992|PTPDC1'] 3590 23916 AGPGQPSVP True NCI_RA007_Epitope_Rep2 808.40791727864 808.4073649679301 100.4 1 -1.8708664817609648 0.4406781528157222 1.0 ['nc|ENSG00000179057|Q8N9C0|IGSF22', 'ENSG00000179057|ENST00000513874|IGSF22'] 101227 9452 SLWAWVERE True NCI_RA007_Epitope_Rep1 1174.5771078620598 1174.5760099358602 40.759 2 -1.8709162357484648 0.4406781528157222 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 78681 14863 PEDCGQPGS True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 63.841 2 -1.8709324994072916 0.4406781528157222 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 104488 8779 SSPAQPPD True PC9_epitope_Rep5 797.35554735261 797.35444993586 38.711 2 -1.8711480759989654 0.4406781528157222 1.0 ['ENSG00000177363|ENST00000317449|LRRN4CL'] 63087 13000 LNMERNNRYQP True PC9_epitope_Rep2 1433.68338091909 1433.6822899358601 55.291 2 -1.8711722646941114 0.4406781528157222 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|7|1|sense', 'ENST00000370793.5_1_1:78211210-78225385:-|nuORF', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|11|1|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|67|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|14|1|sense', 'nc|ENSG1000|Q9UN81|L1_ORF1', 'L1PA2_dup2288|chr7:93586903-93591767:-|1.0358470481420323|0.0689309341738281|3.91|493.0|7|1|sense'] 134206 15810 WRPRKFKMRQF True H1975_Epitope_Rep1 1578.8717908254596 1578.8706899358601 66.119 2 -1.8713970058910547 0.4407173623274618 1.0 ['ENSG00000144815|ENST00000273347|NXPE3'] 122250 15932 VGRRAAKA True NCI_RA007_Epitope_Rep5 827.5089687325898 827.5084249679301 68.007 1 -1.8717910161671916 0.44074069994161647 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 30880 15156 GARPACPK True H1975_Epitope_Rep3 798.4170424936999 798.41649496793 63.699 1 -1.871800196945288 0.44074069994161647 1.0 ['nc|ENSG00000134438|Q9Y2V3-2|RAX', 'ENSG00000134438|ENST00000334889|RAX'] 58798 6667 LFPWYRYKTYY True NCI_RA007_Epitope_Rep1 1598.79218600874 1598.7899798717199 29.944 4 -1.872092031936737 0.44075787618418155 1.0 ['nc|ENSG00000125107|A5YKK6-4|CNOT1'] 124911 20861 VLLRTRPVVI True PC9_epitope_Rep6 1164.7706627185198 1164.76956993586 93.015 2 -1.8723388980518667 0.4407715015861826 1.0 ['ENSG00000115232|ENST00000397033|ITGA4'] 129672 17381 VTIGFSLDRT True PC9_epitope_Rep6 1107.59242357303 1107.5913299358601 79.472 2 -1.8723551802707632 0.4407715015861826 1.0 ['nc|ENSG00000148358|Q5VW38-3|GPR107', 'ENSG00000148358|ENST00000347136|GPR107', 'nc|ENSG00000148358|Q5VW38|GPR107'] 121721 7903 VGLREAALR True NCI_RA007_Epitope_Rep2 983.5876129761098 983.58650993586 35.374 2 -1.8723819291199868 0.4407715015861826 1.0 ['ENST00000544490.5_1_11:72532712-72533589:+|nuORF', 'nc|ENSG00000168010|Q8NAA4-3|ATG16L2', 'ENST00000439504.6_1_11:72525490-72534007:+|nuORF', 'nc|ENSG00000168010|Q8NAA4-2|ATG16L2', 'ENSG00000168010|ENST00000321297|ATG16L2'] 28385 9383 FSDSILSCLE True H1975_Epitope_Rep2 1112.5059766374 1112.5048699358601 41.054 2 -1.8724539279402905 0.4407715015861826 1.0 ['ENST00000372004.7_1_20:46284350-46284446:+|nuORF'] 88496 14736 RAAKTVAH True H1975_Epitope_Rep2 852.49298431528 852.49188993586 61.843 2 -1.872924869369446 0.44079969157900534 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 48012 22046 KAIWLFWGL True PC9_epitope_Rep2 1132.64333694708 1132.64222993586 90.273 2 -1.8729893256821615 0.44080099573727516 1.0 ['GRIN2A|p.L608F|1|0.19|ENSG00000183454|chr16:9829608-9829608|G/A|missense_variant'] 60723 22543 LKAISRKFM True H1975_Epitope_Rep2 1092.6477707045199 1092.64666993586 93.14 2 -1.8730383832794406 0.44080099573727516 1.0 ['ENSG00000182179|ENST00000333486|UBA7'] 78441 14807 PCFSLTHT True NCI_RA007_Epitope_Rep5 904.4112884069201 904.41018993586 63.627 2 -1.8730672329835925 0.440807155130634 1.0 ['nc|ENSG00000259527|Q96N35|LINC00052'] 133628 12466 WKHVRYQMPVP True NCI_RA007_Epitope_Rep1 1439.7496100041099 1439.74850993586 52.468 2 -1.8731281209236517 0.4408463580389695 1.0 ['ENSG00000115602|ENST00000233954|IL1RL1'] 45704 9429 ISLMPESN True PC9_epitope_Rep5 889.42151873745 889.4204299358599 41.224 2 -1.8733433813442717 0.4408538197197991 1.0 ['ENST00000228827.7_1_12:110890687-110890807:-|nuORF'] 80340 5780 PLGAMPVP True NCI_RA007_Epitope_Rep4 780.4203965386399 780.41928993586 28.855 2 -1.8733747958423077 0.4408538197197991 1.0 ['CTNND2|p.T450Rfs*63|1|0.42|ENSG00000169862|chr5:11364719-11364720|GT/-|frameshift_variant', 'CTNND2|p.Y399Afs*21|1|0.3|ENSG00000169862|chr5:11364870-11364873|TGTA/-|frameshift_variant', 'CTNND2|p.D820Ifs*6|1|0.1|ENSG00000169862|chr5:11110864-11110864|T/-|frameshift_variant', 'nc|ENSG00000169862|Q9UQB3-2|CTNND2', 'ENSG00000169862|ENST00000304623|CTNND2', 'ENST00000509868.1_1_5:11508500-11903965:-|nuORF'] 20018 9846 EMQRDHRA True H1975_Epitope_Rep2 1041.47741090413 1041.4763099358602 42.859 2 -1.873448178100276 0.4408538197197991 1.0 ['ENST00000588075.5_3_17:76993904-76996331:-|nuORF', 'ENST00000588611.5_1_17:76993706-77001537:-|nuORF'] 39059 21844 HKTFFPSRGQ True H1975_Epitope_Rep2 1203.61489035311 1203.61324490379 90.331 3 -1.8736320904432544 0.44087099225711235 1.0 ['ENSG00000124203|ENST00000371030|ZNF831'] 134022 4269 WPWRNTSEM True H1975_Epitope_Rep1 1205.52877777065 1205.52768993586 21.394 2 -1.8741822882155788 0.44088851689922137 1.0 ['ENST00000316637.6_1_6:35277486-35278290:+|nuORF'] 128794 20323 VSRIHHKR True NCI_RA007_Epitope_Rep2 1031.6100797561899 1031.60957496793 84.082 1 -1.8743201230841342 0.44088851689922137 1.0 ['ENST00000462302.5_1_X:100871678-100872515:-|nuORF'] 122910 11981 VGVSKVLV True PC9_epitope_Rep4 799.5167394516299 799.51564993586 53.878 2 -1.874327956308833 0.44088851689922137 1.0 ['nc|ENSG00000165671|Q96L73-2|NSD1', 'nc|ENSG00000165671|Q96L73-3|NSD1', 'ENSG00000165671|ENST00000439151|NSD1', 'NSD1-ZNF346|6|fusion', 'NSD1-C11orf58|2|fusion', 'NSD1-ZNF346|5|fusion', 'NSD1-ZNF346|4|fusion', 'NSD1-C11orf58|1|fusion', 'NSD1-ZNF346|8|fusion', 'NSD1-ZNF346|3|fusion', 'NSD1-ZNF346|7|fusion', 'NSD1|p.C2138Sfs*12|1|0.47|ENSG00000165671|chr5:177292108-177292108|G/-|frameshift_variant'] 103252 9094 SQSTSLRGSY True NCI_RA007_Epitope_Rep2 1084.51490152832 1084.51380993586 39.977 2 -1.8744815497784248 0.44088851689922137 1.0 ['FAM21A-LURAP1L|1|fusion', 'FAM21C-LURAP1L|1|fusion', 'FAM21C-LURAP1L|2|fusion'] 98793 24083 SISWPHLLPKP True PC9_epitope_Rep2 1273.71829279249 1273.71664490379 98.137 3 -1.8747851751273006 0.44088851689922137 1.0 ['ENST00000459703.5_1_6:36709837-36709960:-|nuORF'] 122615 12107 VGTLGDAVP True PC9_epitope_Rep1 827.4388830537499 827.43833496793 51.431 1 -1.874907480215853 0.44088851689922137 1.0 ['ENSG00000092096|ENST00000354772|SLC22A17', 'nc|ENSG00000092096|Q8WUG5|SLC22A17', 'nc|ENSG00000092096|Q8WUG5-3|SLC22A17', 'ENST00000557699.5_1_14:23818379-23821759:-|nuORF'] 58494 21517 LEYRPVKVRG True PC9_epitope_Rep6 1215.7087907379498 1215.70714490379 95.638 3 -1.8749835684252911 0.44088851689922137 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 86453 14783 QQRRRRRRDPE True H1975_Epitope_Rep3 1551.8566857965095 1551.85558993586 62.242 2 -1.8750689973033428 0.44088851689922137 1.0 ['PPWD1|p.V596*|1|0.26|ENSG00000113593|chr5:65586169-65586169|G/-|frameshift_variant', 'ENSG00000113593|ENST00000261308|PPWD1', 'ENST00000508982.1_1_5:64859104-64863443:+|nuORF'] 134417 16620 WTEGKAAA True NCI_RA007_Epitope_Rep3 832.4079172786397 832.40682993586 73.156 2 -1.8751173202503535 0.44088851689922137 1.0 ['ENST00000515867.1_1_3:126668128-126668617:+|nuORF'] 79265 10508 PGHGFCSP True H1975_Epitope_Rep2 800.3275587829601 800.3270049679301 45.438 1 -1.8751600545506206 0.44088851689922137 1.0 ['ENST00000474359.6_1_12:58013521-58016599:+|nuORF'] 43558 9178 IIEGAAQGK True NCI_RA007_Epitope_Rep1 885.4919812557699 885.49088993586 39.701 2 -1.875394685545665 0.44089147286821706 1.0 ['ENSG00000108591|ENST00000225729|DRG2', 'ENST00000582314.5_1_17:17997264-18003464:+|nuORF'] 18145 16065 EINKFFETN True H1975_Epitope_Rep2 1140.54513902744 1140.54349490379 66.996 3 -1.8755639475617252 0.44089147286821706 1.0 ['L1P3_dup670|chr3:187834774-187835754:-|2.183426136896085|0.060595092738805|5.17|483.0|30|3|sense'] 69330 19619 LVPRGWHS True PC9_epitope_Rep3 950.5086343794201 950.50752993586 80.702 2 -1.8756403895221632 0.44089147286821706 1.0 ['ENST00000368086.5_2_1:160064936-160068275:-|nuORF'] 84149 12497 QEREQIKALN True NCI_RA007_Epitope_Rep1 1227.6571490879096 1227.6560499358602 52.59 2 -1.875662613322705 0.44089147286821706 1.0 ['CON__Q6IME9', 'ENSG00000139648|ENST00000267119|KRT71', 'CON__Q3SY84', 'CON__Q6NXH9', 'CON__Q9R0H5'] 65713 9965 LSHPPTSQSP True PC9_epitope_Rep2 1049.51417325233 1049.5130699358601 43.661 2 -1.875666671864219 0.44089147286821706 1.0 ['ENST00000551731.1_1_22:51065464-51066207:-|nuORF'] 874 16101 ADLFSVAF True PC9_epitope_Rep1 868.4330693973199 868.43196993586 66.749 2 -1.8757620228399572 0.44089147286821706 1.0 ['ENST00000555736.1_1_14:65714419-65769374:-|nuORF'] 10328 14881 CHVYRLLFF True PC9_epitope_Rep5 1196.6164705762396 1196.6148149037901 62.244 3 -1.875763772704198 0.44089147286821706 1.0 ['nc|ENSG00000105711|Q07699-2|SCN1B', 'ENSG00000105711|ENST00000262631|SCN1B'] 33484 6227 GLGRPLPAA True PC9_epitope_Rep3 850.5024863698198 850.50138993586 28.99 2 -1.8759667754336307 0.44089147286821706 1.0 ['ENST00000558634.5_1_14:24615961-24617291:+|nuORF'] 135337 5369 YDASSAVL True NCI_RA007_Epitope_Rep2 824.39159850816 824.39050993586 25.502 2 -1.8760000853085348 0.44089147286821706 1.0 ['ENST00000503952.5_1_4:128606686-128637588:+|nuORF', 'nc|ENSG00000164066|Q9ULD6-4|INTU', 'ENSG00000164066|ENST00000335251|INTU'] 130247 17337 VTSRRKGL True H1975_Epitope_Rep2 915.5613982282699 915.56084496793 71.981 1 -1.8760125860203551 0.44089147286821706 1.0 ['LTR2752_dup21|chr2:81481148-81482372:-|1.992639235350852|0.0780133736102343|4.67|458.0|40|1|anti-sense'] 80593 24690 PLPCSHPA True PC9_epitope_Rep3 820.39015903952 820.38906993586 100.34 2 -1.8760328107855473 0.44089147286821706 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 64364 17565 LQPKKKREEPT True NCI_RA007_Epitope_Rep5 1352.7775985737596 1352.77650993586 74.351 2 -1.876077198994299 0.44089147286821706 1.0 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'TRMT6|p.L275Ffs*10|1|0.1|ENSG00000089195|chr20:5942625-5942629|AAGAT/-|frameshift_variant', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 52412 20970 KPGPLRRAH True PC9_epitope_Rep6 1030.6148307834599 1030.6137299358602 93.454 2 -1.8761020552300058 0.44089147286821706 1.0 ['ENST00000354765.6_1_6:144285946-144286364:-|nuORF'] 64856 7490 LSAPATKDSE True H1975_Epitope_Rep1 1017.49785448185 1017.49674993586 33.806 2 -1.8763838295443165 0.4409368186923297 1.0 ['ENSG00000144218|ENST00000672756|AFF3', 'nc|ENSG00000144218|P51826-2|AFF3'] 44335 18681 IMEREEKFVTD True H1975_Epitope_Rep3 1395.6704161935497 1395.6693099358602 78.339 2 -1.8764725677062308 0.4409368186923297 1.0 ['ENSG00000135338|ENST00000369846|LCA5'] 127715 25601 VRHKKPVN True PC9_epitope_Rep5 976.59303270972 976.5924849679301 103.79 1 -1.8767390539198257 0.44097600722315816 1.0 ['nc|ENSG00000111247|Q96B01-3|RAD51AP1', 'ENSG00000111247|ENST00000352618|RAD51AP1', 'nc|ENSG00000111247|Q96B01|RAD51AP1', 'RAD51AP1-SLCO1C1|1|fusion', 'RAD51AP1-SLCO1C1|2|fusion', 'RAD51AP1-SLCO1C1|5|fusion', 'RAD51AP1-SLCO1C1|3|fusion', 'RAD51AP1-SLCO1C1|6|fusion', 'RAD51AP1-SLCO1C1|4|fusion'] 60912 24855 LKVLFLDHPKK True NCI_RA007_Epitope_Rep4 1336.8230922142 1336.82198993586 108.1 2 -1.8768622328784992 0.44099317330984367 1.0 ['nc|ENSG00000148300|Q9GZR2-2|REXO4', 'ENSG00000148300|ENST00000371942|REXO4'] 31741 17396 GEKSKKRK True NCI_RA007_Epitope_Rep5 959.5876129761099 959.58706496793 73.694 1 -1.877046544245568 0.4410213496878475 1.0 ['nc|ENSG00000186566|Q9UKJ3-2|GPATCH8', 'TMEM98-GPATCH8|1|fusion', 'ENSG00000186566|ENST00000591680|GPATCH8', 'GPATCH8|p.Q1363Pfs*47|1|0.23|ENSG00000186566|chr17:44397977-44397989|GCTGTAGCTGGCT/-|frameshift_variant'] 46038 21474 ISVPLCPLYLR True PC9_epitope_Rep6 1272.72641494804 1272.7253099358602 95.477 2 -1.87739852353557 0.44105082357086234 1.0 ['ENST00000394833.6_1_4:103265936-103266233:-|nuORF'] 130912 25000 VVHSALLA True PC9_epitope_Rep5 808.48068829608 808.47958993586 101.32 2 -1.877457643336107 0.44105082357086234 1.0 ['ENSG00000104442|ENST00000276569|ARMC1'] 20297 18100 EPAVLRWV True PC9_epitope_Rep5 968.5443511817999 968.54324993586 74.633 2 -1.8774937603254325 0.44105082357086234 1.0 ['ENST00000472018.5_1_16:89760510-89761152:+|nuORF'] 88184 10376 QWWQQILWPAW True H1975_Epitope_Rep1 1540.7615545867998 1540.7599049037901 44.861 3 -1.8776206236159398 0.4410569777043766 1.0 ['ENST00000078429.8_1_19:3123337-3123766:+|nuORF'] 126208 16555 VPGRRASL True NCI_RA007_Epitope_Rep5 854.50863437942 854.50808496793 70.438 1 -1.8777433263961851 0.44105827562288746 1.0 ['nc|ENSG00000092871|Q8WZ73-3|RFFL', 'nc|ENSG00000092871|Q8WZ73-2|RFFL', 'ENSG00000092871|ENST00000394597|RFFL'] 14586 12674 DVGRRRKH True PC9_epitope_Rep4 1022.5845932843399 1022.58348993586 56.595 2 -1.8777935386185094 0.44105827562288746 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 123031 9772 VGYGAAGL True NCI_RA007_Epitope_Rep4 706.3649898374999 706.36444496793 44.437 1 -1.8778396085561908 0.4410718807455604 1.0 ['ENSG00000204267|ENST00000374897|TAP2', 'nc|ENSG00000204267|Q03519-2|TAP2'] 34358 23375 GPSRKLWR True PC9_epitope_Rep6 998.5773826455799 998.57628993586 103.02 2 -1.8779335451377648 0.4410718807455604 1.0 ['ENST00000405405.2_1_6:80663080-80663251:-|nuORF'] 80012 25365 PKGFLFLFF True PC9_epitope_Rep2 1114.62153887334 1114.62044993586 103.25 2 -1.877940796457867 0.4410718807455604 1.0 ['ENST00000487676.1_1_6:32627706-32627964:-|nuORF'] 110361 20524 TILLTKFFMLL True H1975_Epitope_Rep2 1338.79851725914 1338.79740993586 85.034 2 -1.8779783290124825 0.4410718807455604 1.0 ['ENSG00000158158|ENST00000377075|CNNM4'] 10715 25962 CTLREKNKW True NCI_RA007_Epitope_Rep2 1176.60736244452 1176.60571490379 110.11 3 -1.8782676320271494 0.4410951966796208 1.0 ['ENSG00000178404|ENST00000322630|CEP295NL'] 57920 23558 LEQLMKDPLRP True PC9_epitope_Rep1 1338.7329568804598 1338.73184993586 95.406 2 -1.8783162545400616 0.4410951966796208 1.0 ['ENSG00000086544|ENST00000263370|ITPKC'] 97283 9082 SFQYPTTA True PC9_epitope_Rep2 913.41814760917 913.41704993586 40.276 2 -1.8784950319742901 0.4411013497148645 1.0 ['nc|ENSG00000160588|Q6UWV2-2|MPZL3', 'ENSG00000160588|ENST00000278949|MPZL3'] 12762 13826 DLHFLNLEGS True PC9_epitope_Rep3 1143.55603806431 1143.5549499358601 58.263 2 -1.8785806101260916 0.4411087992778273 1.0 ['nc|ENSG00000138658|Q86YA3-4|ZGRF1'] 114695 22878 TSSKGKKGKK True PC9_epitope_Rep2 1047.6400424717897 1047.6389499358602 93.493 2 -1.8785822779163646 0.4411087992778273 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 82388 14781 PTWNRFFL True PC9_epitope_Rep1 1079.55525021867 1079.55414993586 61.674 2 -1.878726218724679 0.4411087992778273 1.0 ['ENST00000368895.2_1_10:124648046-124657367:+|nuORF'] 26565 9718 FIWRRMKTMWF True H1975_Epitope_Rep3 1600.8159157421198 1600.81480993586 42.401 2 -1.878872083774784 0.44112596050111186 1.0 ['ENST00000442563.5_2_7:66235310-66235424:+|nuORF'] 88581 21748 RAKNIFWF True PC9_epitope_Rep6 1080.58688470012 1080.58637496793 96.546 1 -1.8790089306972835 0.4411382650814619 1.0 ['ENST00000503808.5_1_4:57204874-57250274:-|nuORF', 'nc|ENSG00000157426|Q4L235-4|AASDH'] 32401 10239 GGGGGGAG True NCI_RA007_Epitope_Rep5 488.19792451240005 488.19737496793 46.015 1 -1.8790195669223462 0.4411382650814619 1.0 ['ENSG00000113389|ENST00000265074|NPR3', 'nc|ENSG00000113389|P17342-2|NPR3', 'ENSG00000253293|ENST00000283921|HOXA10', 'ENST00000281282.5_1_15:57668737-57730217:+|nuORF', 'ENST00000505897.5_1_17:48172799-48183513:+|nuORF', 'ENST00000543009.5_2_11:71746988-71753144:-|nuORF', 'ENSG00000205922|ENST00000382349|ONECUT3', 'ENST00000378279.3_1_8:117950559-117950772:+|nuORF', 'ENST00000370544.9_1_1:87794323-87794602:+|nuORF', 'ENSG00000205476|ENST00000380243|CCDC85C', 'nc|ENSG00000179915|P58400-1|NRXN1', 'nc|ENSG00000179915|P58400|NRXN1', 'nc|ENSG00000130224|Q5VUJ6-2|LRCH2', 'ENSG00000130224|ENST00000317135|LRCH2', 'ENSG00000104824|ENST00000221419|HNRNPL', 'ENSG00000101331|ENST00000452892|CCM2L', 'nc|ENSG00000101331|Q9NUG4-2|CCM2L', 'ENSG00000167680|ENST00000586582|SEMA6B', 'ENSG00000174279|ENST00000308618|EVX2', 'ARID1A|p.M442Wfs*177|1|0.66|ENSG00000117713|chr1:26729835-26729835|C/-|frameshift_variant', 'ARID1A|p.Q449Hfs*171|2|0.33|ENSG00000117713|chr1:26729854-26729855|-/AC|frameshift_variant', 'ARID1A|p.Q766Pfs*51|1|0.34|ENSG00000117713|chr1:26762190-26762191|-/C|frameshift_variant', 'ARID1A|p.P824Rfs*34|1|0.1|ENSG00000117713|chr1:26763022-26763062|CCCCAGTGCAGGCATGGCTGGAGGCATAAACCCCATGGGTG/-|frameshift_variant', 'ARID1A|p.A1029Pfs*10|1|0.78|ENSG00000117713|chr1:26767885-26767885|G/-|frameshift_variant', 'ARID1A|p.D1050Sfs*52|1|0.41|ENSG00000117713|chr1:26767942-26767949|ACCTCTGG/-|frameshift_variant', 'ARID1A|p.P1175Hfs*5|1|0.54|ENSG00000117713|chr1:26772612-26772612|C/-|frameshift_variant', 'ARID1A|p.A1239Lfs*30|1|0.18|ENSG00000117713|chr1:26772984-26772984|A/-|frameshift_variant', 'ENSG00000138650|ENST00000264360|PCDH10', 'nc|ENSG00000138650|Q9P2E7-2|PCDH10', 'ENSG00000248713|ENST00000511828|C4orf54', 'ENSG00000054598|ENST00000645831|FOXC1', 'ENSG00000275023|ENST00000621332|MLLT6', 'MLLT6|p.K443Tfs*11|1|0.35|ENSG00000275023|chr17:38716658-38716665|AACGGATG/-|frameshift_variant', 'ENSG00000143624|ENST00000318967|INTS3', 'nc|ENSG00000143624|Q68E01|INTS3', 'ENST00000481797.5_1_1:153701080-153719633:+|nuORF', 'ENSG00000130226|ENST00000377770|DPP6', 'ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'ENSG00000163013|ENST00000520530|FBXO41', 'ENSG00000169840|ENST00000302945|GSX1', 'nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant', 'ENSG00000198914|ENST00000361360|POU3F3', 'nc|ENSG00000151322|Q8IXF0-4|NPAS3', 'nc|ENSG00000151322|Q8IXF0-2|NPAS3', 'nc|ENSG00000151322|Q8IXF0-3|NPAS3', 'ENSG00000151322|ENST00000356141|NPAS3', 'ENSG00000142408|ENST00000270458|CACNG8', 'ENSG00000169991|ENST00000455833|IFFO2', 'ADCY1|p.P287Lfs*16|1|0.35|ENSG00000164742|chr7:45610445-45610445|C/-|frameshift_variant', 'ENSG00000164742|ENST00000297323|ADCY1', 'ARID1A|p.P1940Hfs*16|1|0.55|ENSG00000117713|chr1:26779713-26779713|T/-|frameshift_variant', 'nc|ENSG00000117713|O14497-2|ARID1A', 'ARID1A|p.A2065Gfs*34|1|0.25|ENSG00000117713|chr1:26780090-26780091|-/G|frameshift_variant', 'ENSG00000117713|ENST00000324856|ARID1A', 'ARID1A|p.Y1377Wfs*67|1|0.18|ENSG00000117713|chr1:26774355-26774356|AT/-|frameshift_variant', 'nc|ENSG00000008382|Q8N594-2|MPND', 'nc|ENSG00000008382|Q8N594|MPND', 'ENSG00000008382|ENST00000599840|MPND', 'ENSG00000043355|ENST00000376335|ZIC2', 'ENSG00000128713|ENST00000249504|HOXD11', 'ENSG00000251493|ENST00000615637|FOXD1'] 56013 9596 LDKDGRGP True H1975_Epitope_Rep3 856.4402800360799 856.43973496793 41.924 1 -1.8792397128916913 0.4411774419039861 1.0 ['ENST00000408749.1_9:137029622-137029679:-|nuORF'] 99238 16686 SLCPVYRW True PC9_epitope_Rep1 1022.5007721176601 1022.49966993586 69.01 2 -1.879461539679556 0.4411897449445747 1.0 ['ENSG00000144229|ENST00000409968|THSD7B', 'THSD7B|p.D791N|1|0.38|ENSG00000144229|chr2:137272637-137272637|G/A|missense_variant'] 43362 24090 IHLILGSILD True H1975_Epitope_Rep2 1092.6542955536002 1092.6531899358602 99.195 2 -1.8795359586533362 0.4411897449445747 1.0 ['ENST00000470339.1_1_X:107683355-107812096:+|nuORF'] 62536 16805 LLTDKSRV True PC9_epitope_Rep5 930.5498304850599 930.54872993586 69.648 2 -1.8796193204006153 0.44121305520391874 1.0 ['ENSG00000116678|ENST00000349533|LEPR'] 125113 14762 VLPIFTWRL True H1975_Epitope_Rep1 1143.68045073179 1143.67934993586 62.005 2 -1.8796574212329975 0.44121305520391874 1.0 ['TGFBR1|p.T309Rfs*26|1|0.11|ENSG00000106799|chr9:99142656-99142656|C/-|frameshift_variant'] 1537 6794 AEETLEHPWFK True NCI_RA007_Epitope_Rep5 1385.6615657620098 1385.6604699358602 32.819 2 -1.8798378575634613 0.4412315075730891 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG'] 117751 24938 VALKPLGGL True NCI_RA007_Epitope_Rep1 866.5589386167799 866.5583949679301 103.21 1 -1.8798451958091742 0.4412315075730891 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 109952 20565 THSGERPFNC True H1975_Epitope_Rep2 1146.4876412346598 1146.48598490379 85.193 3 -1.879881088643539 0.4412315075730891 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 13057 5041 DLRHFQIIWNM True NCI_RA007_Epitope_Rep2 1471.7394392432298 1471.73779490379 24.233 3 -1.8799331040701506 0.4412486653678081 1.0 ['ENSG00000102452|ENST00000251127|NALCN'] 10278 22793 CGLKFLLAVR True PC9_epitope_Rep4 1118.6634207686598 1118.66232993586 95.894 2 -1.8799609466246088 0.4412499587236244 1.0 ['nc|ENSG00000172869|Q9Y485|DMXL1', 'ENSG00000172869|ENST00000539542|DMXL1'] 48137 26392 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 110.11 3 -1.8799768519991784 0.4412499587236244 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 101873 1991 SPLFLLVKIFR True NCI_RA007_Epitope_Rep1 1331.8329286219098 1331.83129490379 10.486 3 -1.8803503702279742 0.441262258813688 1.0 ['ENST00000568903.5_1_16:24803023-24807335:+|nuORF'] 36604 13706 GVLKPGPELLA True NCI_RA007_Epitope_Rep1 1092.6542955536 1092.6531899358602 57.328 2 -1.8803674917147501 0.441262258813688 1.0 ['ENSG00000112992|ENST00000344920|NNT', 'ENST00000513390.1_1_5:43651911-43653344:+|nuORF'] 121603 23690 VGLCLFPIKYL True PC9_epitope_Rep5 1264.72535231888 1264.7242499358601 96.102 2 -1.8805855587216003 0.4412684086556453 1.0 ['ENST00000309922.6_1_3:101284860-101285061:+|nuORF'] 80080 18548 PKGPEVKLPK True NCI_RA007_Epitope_Rep5 1091.6702799709099 1091.66918993586 78.17 2 -1.8806894661294788 0.4412871701186362 1.0 ['nc|ENSG00000105227|Q9BXM0-3|PRX', 'PRX|p.E1262Afs*109|2|0.44|ENSG00000105227|chr19:40394534-40394567|CAGAAGGTACGCTCGGCCCCTGGGGGCTGCTCCT/-|frameshift_variant', 'ENST00000291825.11_2_19:40899875-40904000:-|nuORF', 'ENSG00000105227|ENST00000324001|PRX'] 90127 19351 RGRWGRKNR True NCI_RA007_Epitope_Rep1 1184.6751396242398 1184.67349490379 79.425 3 -1.8807982866395765 0.4412871701186362 1.0 ['ENSG00000083168|ENST00000265713|KAT6A'] 9510 20382 AWNLPYGLV True PC9_epitope_Rep6 1031.5440168286298 1031.54347496793 91.099 1 -1.881087931047886 0.4412871701186362 1.0 ['ENSG00000188820|ENST00000368605|CALHM6'] 6157 6264 APPGQRLCV True PC9_epitope_Rep4 939.49602109039 939.49492993586 31.148 2 -1.8811256959492968 0.4412871701186362 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF'] 11532 16545 DGLGMIVRSII True PC9_epitope_Rep4 1172.65872931104 1172.65762993586 71.613 2 -1.8811259349630391 0.4412871701186362 1.0 ['nc|ENSG00000107186|O75970-5|MPDZ', 'nc|ENSG00000107186|O75970-3|MPDZ', 'nc|ENSG00000107186|O75970-2|MPDZ', 'MPDZ|p.G2047Efs*20|1|0.46|ENSG00000107186|chr9:13107038-13107038|C/-|frameshift_variant', 'MPDZ|p.P1293Ffs*51|1|0.19|ENSG00000107186|chr9:13140108-13140113|CAATGG/AA|frameshift_variant', 'ENSG00000107186|ENST00000319217|MPDZ', 'MPDZ|p.S1510Efs*25|1|0.23|ENSG00000107186|chr9:13126713-13126714|-/A|frameshift_variant', 'ENST00000539508.5_1_9:13136054-13190160:-|nuORF'] 10699 7829 CSRHGSGP True NCI_RA007_Epitope_Rep1 799.3395204489899 799.3389749679301 34.444 1 -1.8811680747853363 0.4412871701186362 1.0 ['ENSG00000160741|ENST00000368633|CRTC2', 'ENST00000461638.6_1_1:153920587-153921610:-|nuORF'] 88317 12761 QYLEYDRFLL True H1975_Epitope_Rep3 1358.6870522338597 1358.6859499358602 54.299 2 -1.881214881311335 0.4412871701186362 1.0 ['RGS7|p.P295R|1|0.19|ENSG00000182901|chr1:240813690-240813690|G/C|missense_variant'] 123991 13988 VKKRAIVKKLP True PC9_epitope_Rep5 1278.8863611770998 1278.8847149037902 58.826 3 -1.8812702143940294 0.4412871701186362 1.0 ['nc|ENSG00000017260|P98194-2|ATP2C1', 'nc|ENSG00000017260|P98194-4|ATP2C1', 'ENSG00000017260|ENST00000510168|ATP2C1', 'nc|ENSG00000017260|P98194-3|ATP2C1', 'nc|ENSG00000017260|P98194-5|ATP2C1', 'nc|ENSG00000017260|P98194-8|ATP2C1', 'nc|ENSG00000017260|P98194-9|ATP2C1', 'nc|ENSG00000017260|P98194-6|ATP2C1', 'nc|ENSG00000017260|P98194-7|ATP2C1'] 83421 11290 QCFKNDIHK True PC9_epitope_Rep6 1131.5495132152298 1131.54787490379 54.442 3 -1.8813243505825203 0.4412871701186362 1.0 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'LRRK2|p.F1306Ifs*2|1|0.33|ENSG00000188906|chr12:40305920-40305932|AACTTTGATTTTA/-|frameshift_variant'] 45618 9756 ISHCTVKLRQ True PC9_epitope_Rep5 1183.64956160967 1183.64791490379 42.497 3 -1.881551660545693 0.4412871701186362 1.0 ['nc|ENSG00000100505|Q9C026-5|TRIM9', 'nc|ENSG00000100505|Q9C026|TRIM9', 'ENSG00000100505|ENST00000684578|TRIM9', 'nc|ENSG00000100505|Q9C026-4|TRIM9'] 30777 3152 GAPGPAGAHGN True NCI_RA007_Epitope_Rep1 904.4151279174001 904.41402993586 16.154 2 -1.8817843773103409 0.4412871701186362 1.0 ['COL1A1|p.R322H|1|0.46|ENSG00000108821|chr17:50196192-50196192|C/T|missense_variant'] 47045 25538 IVSRIQRYC True H1975_Epitope_Rep2 1136.6124478249599 1136.61134993586 104.86 2 -1.8818010843478798 0.4412871701186362 1.0 ['nc|ENSG00000179364|Q86VP3-4|PACS2', 'nc|ENSG00000179364|Q86VP3|PACS2', 'ENSG00000179364|ENST00000447393|PACS2', 'ENST00000551692.5_1_14:105834472-105850026:+|nuORF', 'ENST00000547903.1_1_14:105848293-105857603:+|nuORF'] 68265 7286 LTRGPGAF True PC9_epitope_Rep2 817.4446371405298 817.44354993586 33.412 2 -1.8818499779208557 0.4413043239019666 1.0 ['ENSG00000132549|ENST00000357162|VPS13B', 'nc|ENSG00000132549|Q7Z7G8-6|VPS13B', 'nc|ENSG00000132549|Q7Z7G8|VPS13B'] 77477 24537 NYPNIFRIS True NCI_RA007_Epitope_Rep1 1122.5821932425 1122.58054490379 101.64 3 -1.8820004205347391 0.4413094910591472 1.0 ['CNGA2|p.I487Mfs*21|1|0.55|ENSG00000183862|chrX:151743964-151743964|C/-|frameshift_variant', 'ENSG00000183862|ENST00000329903|CNGA2', 'ENSG00000198515|ENST00000514170|CNGA1'] 117749 25232 VALKPLGGL True H1975_Epitope_Rep2 866.5589386167799 866.5583949679301 103.66 1 -1.8822087117218138 0.4413094910591472 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 93664 8991 RTFWYWNYNYY True PC9_epitope_Rep3 1674.7255630008997 1674.72391490379 39.528 3 -1.88247623870302 0.4413094910591472 1.0 ['nc|ENSG00000106392|Q9NS00-2|C1GALT1', 'ENSG00000106392|ENST00000436587|C1GALT1'] 7437 14600 ASDDYIFFN True H1975_Epitope_Rep2 1090.46074069714 1090.4596499358602 61.317 2 -1.882625197807247 0.4413094910591472 1.0 ['ENSG00000164946|ENST00000380880|FREM1'] 121795 8584 VGMSKASSC True NCI_RA007_Epitope_Rep4 868.37827402648 868.37716993586 39.802 2 -1.882639249553324 0.4413094910591472 1.0 ['nc|ENSG00000151779|A2RRP1-2|NBAS', 'ENSG00000151779|ENST00000281513|NBAS', 'NBAS|p.Q1305Rfs*3|1|0.1|ENSG00000151779|chr2:15356321-15356321|G/-|frameshift_variant', 'NBAS|p.W1409Gfs*7|1|0.16|ENSG00000151779|chr2:15330720-15330720|A/-|frameshift_variant', 'NBAS|p.K1052Nfs*24|1|0.48|ENSG00000151779|chr2:15394328-15394328|T/-|frameshift_variant'] 18033 8043 EIIHTGQKPY True PC9_epitope_Rep6 1184.61897267404 1184.6178699358602 40.424 2 -1.882702071052589 0.4413094910591472 1.0 ['ZNF99|p.K594Nfs*20|1|0.38|ENSG00000213973|chr19:22758127-22758127|T/-|frameshift_variant', 'ZNF99|p.K562Rfs*52|1|0.12|ENSG00000213973|chr19:22758226-22758226|C/-|frameshift_variant', 'ZNF99|p.Y649Tfs*21|1|0.17|ENSG00000213973|chr19:22757965-22757965|G/-|frameshift_variant', 'ZNF99|p.G767Afs*15|1|0.13|ENSG00000213973|chr19:22757609-22757609|C/-|frameshift_variant', 'ENSG00000213973|ENST00000596209|ZNF99'] 99906 10295 SLHYQFYVWYF True H1975_Epitope_Rep1 1551.7186867153098 1551.7175899358601 44.545 2 -1.8827158450119115 0.4413094910591472 1.0 ['ENST00000485912.1_1_3:183960304-183960812:-|nuORF', 'nc|ENSG00000214160|Q92685-2|ALG3', 'ENSG00000214160|ENST00000397676|ALG3'] 69588 1107 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 5.7843 3 -1.882827957964823 0.4413094910591472 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 61877 22293 LLLFIFFIPAF True PC9_epitope_Rep6 1339.7944178548698 1339.79278490379 98.721 3 -1.8831959979033257 0.44137065891984684 1.0 ['ENST00000377270.7_1_9:71687674-71687986:+|nuORF'] 58718 24790 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 107.19 2 -1.883325735113739 0.441409817665636 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 64559 18397 LRDGRQVGR True PC9_epitope_Rep5 1055.59482361487 1055.59427496793 75.783 1 -1.8835325913894856 0.4414379717863509 1.0 ['ENST00000465315.1_1_2:131099287-131099515:-|nuORF'] 91482 17335 RNVRRLPDRQ True NCI_RA007_Epitope_Rep3 1308.7486984873199 1308.74760993586 76.07 2 -1.8835795002914824 0.441444118003059 1.0 ['ENST00000290231.10_1_20:44692028-44693736:-|nuORF'] 79043 19307 PFPSKRLQLE True PC9_epitope_Rep4 1213.68190728377 1213.68080993586 82.372 2 -1.8837781340179995 0.44145026408450705 1.0 ['ENST00000392952.7_1_10:116193119-116193278:-|nuORF'] 13341 6126 DMLRYYYYIHH True NCI_RA007_Epitope_Rep1 1572.7183694454802 1572.71726993586 27.867 2 -1.8839288452754 0.44145155256266366 1.0 ['DNAH7|p.I161M|2|0.19|ENSG00000118997|chr2:196027963-196027963|G/C|missense_variant'] 61429 18651 LLESNSAK True NCI_RA007_Epitope_Rep2 860.46034677432 860.4597949679301 77.346 1 -1.8839519153363309 0.44145155256266366 1.0 ['ENSG00000070601|ENST00000377765|FRMPD1', 'nc|ENSG00000070601|Q5SYB0-2|FRMPD1', 'nc|ENSG00000070601|Q5SYB0-3|FRMPD1', 'FRMPD1|p.L854Rfs*10|1|0.72|ENSG00000070601|chr9:37744593-37744593|T/-|frameshift_variant'] 131224 26528 VVPQLKYKV True PC9_epitope_Rep5 1072.6644663144798 1072.6633699358601 108.04 2 -1.8842521199582176 0.4414554176568964 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 120658 7025 VGALRALH True PC9_epitope_Rep4 835.50282072299 835.50172993586 34.273 2 -1.8842654054329069 0.4414554176568964 1.0 ['ENST00000605573.1_1_3:187871072-187871573:-|nuORF'] 87021 9147 QSCSRMEDWK True NCI_RA007_Epitope_Rep3 1268.5277917944798 1268.52613490379 43.065 3 -1.8842715259126972 0.4414554176568964 1.0 ['ZNF521|p.G234C|1|0.39|ENSG00000198795|chr18:25227218-25227218|C/A|missense_variant'] 70626 14570 MALARGQP True PC9_epitope_Rep1 842.4432572415399 842.44214993586 60.868 2 -1.884356948816098 0.4414554176568964 1.0 ['ENST00000498794.1_1_3:49054861-49054900:-|nuORF'] 25636 7451 FEVTLGGV True NCI_RA007_Epitope_Rep2 820.4330693973199 820.43196993586 33.609 2 -1.8844549641927641 0.4414554176568964 1.0 ['ENST00000494735.1_1_7:142960606-142960717:+|nuORF'] 52789 14131 KQRRLEVRQTY True H1975_Epitope_Rep1 1475.8320937581097 1475.83098993586 59.527 2 -1.8845024040816893 0.4414554176568964 1.0 ['nc|ENSG00000108588|Q96A33-2|CCDC47'] 122978 7108 VGWRGTGSGKL True PC9_epitope_Rep4 1116.60399131624 1116.60288993586 34.61 2 -1.8846149843784794 0.4414615630054242 1.0 ['ENST00000370406.7_1_X:149106790-149106904:-|nuORF'] 133184 9854 WDVERVAEWPW True H1975_Epitope_Rep1 1471.6884492161896 1471.68734993586 42.836 2 -1.8848233485688028 0.44151171746066675 1.0 ['ENSG00000115548|ENST00000312912|KDM3A'] 117754 24869 VALKPLGGL True NCI_RA007_Epitope_Rep5 866.5589386167799 866.5583949679301 103.15 1 -1.8849482074463813 0.4415142913723678 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 59375 13808 LGLELRPEA True PC9_epitope_Rep1 996.5603951687599 996.55928993586 57.956 2 -1.8849906888034986 0.4415142913723678 1.0 ['ENSG00000142327|ENST00000270357|RNPEPL1'] 111429 14507 TLKKYRSI True PC9_epitope_Rep2 1007.6127650947899 1007.61166993586 61.073 2 -1.8850354016567956 0.4415142913723678 1.0 ['nc|ENSG00000183621|Q7Z4V0-3|ZNF438', 'nc|ENSG00000183621|Q7Z4V0-2|ZNF438', 'ENSG00000183621|ENST00000436087|ZNF438'] 91371 22616 RMRRNAFSI True PC9_epitope_Rep4 1149.61893018773 1149.61729490379 95.223 3 -1.8850388669050222 0.4415142913723678 1.0 ['ENSG00000170255|ENST00000526914|MRGPRX1'] 125813 24704 VNLPPALK True PC9_epitope_Rep4 850.5276384885 850.52708496793 103.52 1 -1.8855717098054854 0.4415974476043787 1.0 ['ENSG00000168564|ENST00000504169|CDKN2AIP'] 32849 18856 GIHKHKHLAE True PC9_epitope_Rep2 1168.6465248345598 1168.6454299358602 77.896 2 -1.88562877856285 0.44160359091709206 1.0 ['ENST00000484819.1_1_1:154241897-154242149:+|nuORF'] 34147 25028 GPEAGGLH True H1975_Epitope_Rep2 736.3504024025201 736.34985496793 102.85 1 -1.8856891048493403 0.441604875794847 1.0 ['nc|ENSG00000164929|Q8WXS3-6|BAALC', 'nc|ENSG00000164929|Q8WXS3-5|BAALC', 'nc|ENSG00000164929|Q8WXS3-4|BAALC', 'ENSG00000164929|ENST00000309982|BAALC', 'nc|ENSG00000164929|Q8WXS3-3|BAALC', 'nc|ENSG00000164929|Q8WXS3-1|BAALC'] 17988 9044 EIGVHLYQ True NCI_RA007_Epitope_Rep3 957.49198125577 957.49088993586 42.669 2 -1.8857483658377665 0.441604875794847 1.0 ['PCDH8|p.P1050H|1|0.44|ENSG00000136099|chr13:52844624-52844624|G/T|missense_variant'] 15066 16108 EAARRRRPER True NCI_RA007_Epitope_Rep2 1295.7282973959097 1295.7272099358602 67.381 2 -1.885872746742773 0.4416220200442249 1.0 ['ENSG00000160460|ENST00000598249|SPTBN4', 'nc|ENSG00000160460|Q9H254-3|SPTBN4'] 93994 11582 RVPRDDWEEKR True H1975_Epitope_Rep1 1484.7484237038 1484.74732993586 49.537 2 -1.8859754384077585 0.4416343054531853 1.0 ['ENSG00000015479|ENST00000394805|MATR3'] 59264 8639 LGGRCSHC True H1975_Epitope_Rep3 831.34797695771 831.34742496793 38.225 1 -1.8860910731824412 0.4416343054531853 1.0 ['L1ME1_dup20737|chr11:12960950-12961643:-|1.693443910812395|0.3279391910638228|2.37|477.0|9|2|sense'] 30989 8216 GATLLRDV True NCI_RA007_Epitope_Rep3 843.48141657207 843.48030993586 39.451 2 -1.886333097752388 0.4416685917956503 1.0 ['ENSG00000177542|ENST00000628067|SLC25A22'] 78715 14907 PEEQLPKT True PC9_epitope_Rep2 940.48656152216 940.48601496793 62.604 1 -1.886414774104776 0.4416685917956503 1.0 ['ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-5|DENND1A'] 10761 23778 CYGGIKKG True PC9_epitope_Rep3 824.4214591678 824.42036993586 96.746 2 -1.8866105007400726 0.44168573440112646 1.0 ['ENSG00000138829|ENST00000262464|FBN2', 'nc|ENSG00000138829|P35556-2|FBN2', 'ENST00000511489.1_1_5:127701040-127712520:-|nuORF'] 49307 17556 KHRVEDMQ True NCI_RA007_Epitope_Rep4 1041.50256302281 1041.50146993586 75.978 2 -1.8870625899879738 0.44172487761949286 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 80069 16537 PKGKRSLN True NCI_RA007_Epitope_Rep3 898.5348491272599 898.53374993586 72.841 2 -1.8871487930698772 0.4417261597016731 1.0 ['NPVF|p.E54K|2|0.22|ENSG00000105954|chr7:25227005-25227005|C/T|missense_variant'] 107725 5210 TALLVIIIII True PC9_epitope_Rep1 1080.75221868972 1080.75112993586 24.89 2 -1.8871770087222897 0.4417261597016731 1.0 ['nc|ENSG00000171045|Q96NA8-2|TSNARE1', 'ENSG00000171045|ENST00000524325|TSNARE1'] 12829 17056 DLKNCYSEN True PC9_epitope_Rep2 1084.44952439044 1084.44842993586 70.857 2 -1.8872680480393995 0.44173230078760944 1.0 ['ENSG00000115008|ENST00000263339|IL1A'] 99111 15929 SLAGEKMP True H1975_Epitope_Rep2 831.41603943419 831.41549496793 66.471 1 -1.8873888190502925 0.44176044176044177 1.0 ['ENST00000607322.1_1_9:99973694-100000842:-|nuORF'] 30964 9101 GASVAWHAK True H1975_Epitope_Rep1 925.47699989797 925.4764549679301 39.911 1 -1.8875914086088772 0.4417885821141789 1.0 137278 25783 YLGKAKPL True PC9_epitope_Rep2 888.5432885526399 888.54274496793 104.9 1 -1.887627343477323 0.44179114327826297 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 139047 23128 YSKLAFRTL True PC9_epitope_Rep2 1097.62332977849 1097.62222993586 94.454 2 -1.8878801446753801 0.44179114327826297 1.0 ['ENSG00000105865|ENST00000265720|DUS4L'] 38453 22386 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 92.516 2 -1.8879442265989066 0.44179114327826297 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 111450 12424 TLKVEHPD True PC9_epitope_Rep3 937.48689587533 937.48578993586 52.815 2 -1.8879451094682673 0.44179114327826297 1.0 ['ENSG00000187323|ENST00000442544|DCC', 'DCC|p.P1086Rfs*15|1|0.23|ENSG00000187323|chr18:53450522-53450522|C/-|frameshift_variant'] 100776 18917 SLRQQLRER True NCI_RA007_Epitope_Rep5 1184.6738022115599 1184.6727099358602 79.603 2 -1.888015962520773 0.441791405914895 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 60006 15734 LHRAAELLAWA True NCI_RA007_Epitope_Rep2 1249.69314067381 1249.69204993586 65.92 2 -1.8881001783092783 0.441791405914895 1.0 ['ENSG00000183479|ENST00000370231|TREX2', 'nc|ENSG00000183479|Q9BQ50-1|TREX2'] 137801 23324 YPEHLPLE True NCI_RA007_Epitope_Rep5 996.4916469025999 996.49054993586 97.003 2 -1.888295527614305 0.441791405914895 1.0 ['ENSG00000166938|ENST00000319212|DIS3L', 'DIS3L|p.K695Rfs*37|1|0.32|ENSG00000166938|chr15:66326243-66326243|A/-|frameshift_variant', 'nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L', 'DIS3L|p.N286Tfs*9|1|0.18|ENSG00000166938|chr15:66315076-66315076|A/-|frameshift_variant', 'ENST00000565281.5_1_15:66585934-66615040:+|nuORF', 'ENST00000524795.5_1_15:66587446-66615029:+|nuORF'] 69589 1173 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 6.1315 3 -1.8884127061508709 0.441791405914895 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 112399 23566 TNFKIPLLKNK True PC9_epitope_Rep1 1314.8023567696198 1314.8007149037899 95.434 3 -1.8884950433721894 0.441791405914895 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 80504 20704 PLLLALRW True PC9_epitope_Rep6 980.61712219924 980.61602993586 92.4 2 -1.8886122082194654 0.441791405914895 1.0 ['ENSG00000170128|ENST00000304244|GPR25'] 6002 22815 APLLGRLQ True PC9_epitope_Rep1 866.5337864981 866.53268993586 92.571 2 -1.8886199736188898 0.441791405914895 1.0 ['ENST00000585203.6_1_17:7126346-7127336:+|nuORF'] 125812 25623 VNLPPALK True PC9_epitope_Rep2 850.5276384885 850.52708496793 104.25 1 -1.8886557602983964 0.441791405914895 1.0 ['ENSG00000168564|ENST00000504169|CDKN2AIP'] 69779 10391 LWREQFYRYYQ True NCI_RA007_Epitope_Rep1 1650.7943112670598 1650.7932099358602 44.401 2 -1.8887308456861596 0.441791405914895 1.0 ['ENSG00000159069|ENST00000325285|FBXW5', 'nc|ENSG00000159069|Q969U6-2|FBXW5'] 80978 24619 PNKECIWTI True H1975_Epitope_Rep2 1102.5481162329 1102.5470099358602 101.25 2 -1.8888177047751642 0.4418085433988826 1.0 ['ENSG00000106333|ENST00000223061|PCOLCE', 'ENST00000496269.1_1_7:100200079-100202130:+|nuORF', 'PCOLCE|p.K299Qfs*16|1|0.13|ENSG00000106333|chr7:100606578-100606579|-/C|frameshift_variant'] 38198 22642 HETGHVLG True H1975_Epitope_Rep3 848.41406528824 848.41296993586 94.63 2 -1.888943970223303 0.44182338062245685 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 85601 7693 QLMEDHDIDV True PC9_epitope_Rep2 1213.52850298713 1213.52740993586 34.962 2 -1.8889671734310085 0.44182338062245685 1.0 ['ENSG00000129317|ENST00000344862|PUS7L', 'nc|ENSG00000129317|Q9H0K6-2|PUS7L'] 85606 8499 QLNALQRHRR True NCI_RA007_Epitope_Rep1 1290.73813380362 1290.7370299358602 37.059 2 -1.889015525693254 0.44182338062245685 1.0 ['ENSG00000125812|ENST00000338121|GZF1', 'nc|ENSG00000125812|Q9H116-4|GZF1'] 124786 23521 VLLARSWRS True PC9_epitope_Rep6 1086.62981214126 1086.6287099358601 103.61 2 -1.889092814850565 0.44182338062245685 1.0 ['L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|116|3|sense'] 92308 12732 RQLMPPPAFPV True PC9_epitope_Rep5 1251.67979910879 1251.67870993586 53.982 2 -1.8890986273767736 0.44182338062245685 1.0 ['nc|ENSG00000132680|Q7Z7F0-2|KHDC4', 'ENSG00000132680|ENST00000368321|KHDC4'] 127773 18712 VRKMAVMIK True H1975_Epitope_Rep1 1074.6405771490997 1074.63946993586 78.032 2 -1.88911157405393 0.44182338062245685 1.0 ['ENST00000517608.5_1_8:74705439-74705553:-|nuORF'] 125216 15112 VLQPQRVL True PC9_epitope_Rep2 951.5865503469498 951.58544993586 63.385 2 -1.889322944833839 0.4418295190859003 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 32572 6975 GGYTDIDLAVD True PC9_epitope_Rep6 1137.51898384925 1137.51733490379 35.796 3 -1.8896007295336787 0.44183207785781053 1.0 ['ENSG00000034971|ENST00000037502|MYOC'] 83345 22553 QAPLQRRI True PC9_epitope_Rep3 980.5879473292799 980.58684993586 92.019 2 -1.8896176091655985 0.44183207785781053 1.0 ['ENSG00000130699|ENST00000252996|TAF4', 'ENST00000436129.2_1_20:60551226-60583162:-|nuORF'] 124148 25328 VKVPQLAL True PC9_epitope_Rep2 866.5589386167799 866.5583949679301 103.1 1 -1.8896703794793976 0.44183207785781053 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 48143 24234 KAQILKRRLVP True NCI_RA007_Epitope_Rep4 1320.87177374212 1320.8701349037901 105.1 3 -1.8900120083179992 0.44183207785781053 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 15708 9459 EDAERREREER True NCI_RA007_Epitope_Rep1 1473.6920310264902 1473.6909299358601 40.787 2 -1.8900226872570303 0.44183821588809713 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 135683 15771 YEHWLYYLD True PC9_epitope_Rep6 1300.57643915572 1300.57534993586 72.905 2 -1.8902145013351 0.4418407741367935 1.0 ['nc|ENSG00000163935|Q9UHJ3-2|SFMBT1', 'ENSG00000163935|ENST00000394752|SFMBT1'] 32302 15363 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 65.801 2 -1.8903396001543835 0.4418407741367935 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 24803 23503 FCKFLRQKRN True PC9_epitope_Rep2 1338.7342942931398 1338.73318993586 95.879 2 -1.890345744951556 0.4418407741367935 1.0 ['ENST00000500268.6_1_4:10455287-10455473:-|nuORF'] 57372 10643 LEHGVVYE True NCI_RA007_Epitope_Rep5 944.4603467743199 944.45924993586 47.575 2 -1.8903633435201919 0.4418407741367935 1.0 ['ENSG00000124126|ENST00000371941|PREX1', 'nc|ENSG00000124126|Q8TCU6-2|PREX1', 'nc|ENSG00000124126|Q8TCU6-3|PREX1'] 30803 9173 GAPPGEAP True H1975_Epitope_Rep1 694.32860432878 694.32805496793 40.189 1 -1.8907633064898843 0.44186174365289677 1.0 ['nc|ENSG00000288658|A0A7I2V3R4|RNF228'] 58719 25036 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 108.21 2 -1.8908886874318418 0.44186174365289677 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 44334 18546 IMEREEKFVTD True H1975_Epitope_Rep3 1395.6704161935497 1395.6693099358602 77.776 2 -1.8909546264803498 0.44186174365289677 1.0 ['ENSG00000135338|ENST00000369846|LCA5'] 100304 12087 SLLVRASVDP True H1975_Epitope_Rep1 1055.59750895347 1055.59697496793 51.506 1 -1.8910088845631974 0.44186174365289677 1.0 ['ENSG00000164366|ENST00000296824|CCDC127'] 99180 6520 SLARDPLP True PC9_epitope_Rep1 867.4814165720699 867.48030993586 29.882 2 -1.8912230058209734 0.44186174365289677 1.0 ['ENST00000371822.9_1_X:117480162-117480498:+|nuORF'] 121620 12623 VGLEPGTRYN True NCI_RA007_Epitope_Rep3 1104.55637241748 1104.55526993586 56.897 2 -1.891352473113985 0.44186174365289677 1.0 ['nc|ENSG00000149177|Q12913-3|PTPRJ', 'ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 85260 21285 QKPKAGRH True NCI_RA007_Epitope_Rep5 920.5304324531598 920.52932993586 88.922 2 -1.8913596709290876 0.44186174365289677 1.0 ['nc|ENSG00000235927|Q8NBZ9|NEXN-AS1'] 118256 23847 VCKQCEAH True NCI_RA007_Epitope_Rep2 916.38950741652 916.38840993586 100.13 2 -1.8915508601770312 0.4418630221332835 1.0 ['ENST00000468633.1_1_10:23408104-23409788:+|nuORF', 'ENSG00000148450|ENST00000376510|MSRB2'] 65033 14710 LSDKAKAC True NCI_RA007_Epitope_Rep2 834.4269384710599 834.4263849679301 61.889 1 -1.8917195770069792 0.4418630221332835 1.0 ['ENST00000588097.5_1_17:42381086-42381365:-|nuORF'] 112773 12349 TPLDLTPSIH True PC9_epitope_Rep6 1092.58152453616 1092.5804299358601 58.903 2 -1.8917491727129243 0.441864300557443 1.0 ['ENST00000305901.6_1_15:53049335-53049596:-|nuORF'] 62275 3582 LLQKPLRWHDA True PC9_epitope_Rep5 1375.7724536236701 1375.7707949037901 18.853 3 -1.891763443024745 0.441864300557443 1.0 ['ENSG00000011028|ENST00000303375|MRC2'] 5547 11901 ANIGPLLV True PC9_epitope_Rep1 795.48543932335 795.48434993586 50.643 2 -1.8919803224068152 0.441876573614944 1.0 ['nc|ENSG00000101276|Q9NQ40-2|SLC52A3', 'ENSG00000101276|ENST00000645534|SLC52A3'] 52910 18293 KRHRGKSLK True NCI_RA007_Epitope_Rep5 1108.6941437333198 1108.69304993586 77.163 2 -1.8920979901397976 0.441876573614944 1.0 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'JAKMIP1|p.T470Rfs*22|1|0.15|ENSG00000152969|chr4:6064903-6064903|T/-|frameshift_variant', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-6|JAKMIP1'] 88606 23860 RALQTLHV True H1975_Epitope_Rep2 936.5504991914 936.54940993586 98.288 2 -1.89227234153672 0.4418791296986488 1.0 ['ENST00000534939.2_2_15:63892815-63893235:+|nuORF', 'ENSG00000197361|ENST00000638704|FBXL22'] 127254 20849 VQKHLILE True H1975_Epitope_Rep2 978.5862159937799 978.58510993586 86.326 2 -1.8922735568978122 0.4418791296986488 1.0 ['ENST00000342992.10_3_2:179584742-179584871:-|nuORF'] 121101 14571 VGGCPGDD True NCI_RA007_Epitope_Rep5 718.25920443962 718.25865496793 62.719 1 -1.8923384676997896 0.4418791296986488 1.0 ['ENST00000426654.6_1_16:69599384-69602431:+|nuORF'] 106777 7780 SYFSNAPV True PC9_epitope_Rep3 883.4075829254699 883.40648993586 34.92 2 -1.8923617590372028 0.4418791296986488 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant', 'DHX34|p.S320C|1|0.28|ENSG00000134815|chr19:47355292-47355292|C/G|missense_variant'] 98815 15694 SITNKKLQ True PC9_epitope_Rep2 930.5498304850598 930.54872993586 65.643 2 -1.8924576694020587 0.44188526572703885 1.0 ['ENST00000374754.8_1_10:35328003-35333570:-|nuORF'] 80098 24419 PKGRQRKLWKD True PC9_epitope_Rep1 1410.8208007984197 1410.8197099358601 98.771 2 -1.8925818924559739 0.4419085312225154 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF', 'ENSG00000108349|ENST00000264645|CASC3'] 100640 7471 SLQQVQIV True PC9_epitope_Rep4 913.5232813840499 913.52218993586 36.093 2 -1.892606724933341 0.4419085312225154 1.0 ['ENSG00000105866|ENST00000222584|SP4'] 69593 1448 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 7.5294 3 -1.8928482861472566 0.4419330724242557 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 133922 6963 WNRDNPKI True PC9_epitope_Rep5 1041.53557740325 1041.5344899358602 31.751 2 -1.8929701123900742 0.4419330724242557 1.0 ['nc|ENSG00000116962|P14543-2|NID1', 'ENSG00000116962|ENST00000264187|NID1'] 80548 8590 PLLVKVKAQ True PC9_epitope_Rep3 994.65390163078 994.65280993586 37.993 2 -1.8929809599365452 0.4419330724242557 1.0 ['ENSG00000125676|ENST00000245838|THOC2'] 33895 7811 GLYDEKPLTFF True NCI_RA007_Epitope_Rep2 1328.66525416012 1328.66414993586 35.012 2 -1.8932728817634565 0.4419330724242557 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 86136 21974 QPRVQRPRPRR True PC9_epitope_Rep5 1444.8599802717997 1444.8588899358601 89.555 2 -1.8935609129260933 0.4419918654501484 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 33996 22548 GNGVLQVS True PC9_epitope_Rep1 772.40791727864 772.40682993586 91.534 2 -1.893693398299727 0.4419918654501484 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 63219 15796 LNWFHRNI True PC9_epitope_Rep4 1098.5722972651402 1098.57120993586 68.684 2 -1.8938361893884 0.4419918654501484 1.0 ['ENST00000583028.1_1_17:62175367-62207458:-|nuORF'] 134185 8470 WRLRHFVSWLW True H1975_Epitope_Rep3 1584.84662162344 1584.8455299358602 37.565 2 -1.893989716099906 0.4419918654501484 1.0 ['ENST00000444220.2_1_22:24056424-24059433:-|nuORF', 'ENST00000435868.1_1_22:24056493-24057363:-|nuORF', 'ENST00000451837.5_1_22:24056493-24059477:-|nuORF', 'ENST00000422506.5_1_22:24056493-24059433:-|nuORF', 'ENST00000452737.5_1_22:24056401-24059477:-|nuORF', 'nc|ENSG00000272578|Q6P575|GUSBP11'] 124152 24865 VKVPQLAL True PC9_epitope_Rep4 866.5589386167799 866.5583949679301 104.16 1 -1.8940240585123764 0.4419918654501484 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 28051 3238 FRDEMVNRIWQ True NCI_RA007_Epitope_Rep1 1492.7245174550799 1492.72288490379 16.49 3 -1.894127757010554 0.4419918654501484 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 2994 10915 AFMKSPVGQY True NCI_RA007_Epitope_Rep3 1126.5481162329 1126.5470099358602 50.012 2 -1.8942746089913134 0.44200692421827775 1.0 ['ENSG00000011638|ENST00000233047|LDAF1', 'nc|ENSG00000011638|Q96B96-2|LDAF1'] 82270 18258 PTMIRAFPAN True PC9_epitope_Rep2 1116.5749996870798 1116.57390993586 75.55 2 -1.8943769500343683 0.44200692421827775 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 97704 14579 SHECGWCG True NCI_RA007_Epitope_Rep5 877.2847079948099 877.28415496793 62.748 1 -1.8943848153622616 0.44200692421827775 1.0 ['ENSG00000105429|ENST00000251268|MEGF8', 'nc|ENSG00000105429|Q7Z7M0-2|MEGF8', 'MEGF8|p.A1065Pfs*28|1|0.5|ENSG00000105429|chr19:42352298-42352298|T/-|frameshift_variant'] 61253 14056 LLDRLRKHQG True H1975_Epitope_Rep3 1234.72583778442 1234.72474993586 59.39 2 -1.894459701599346 0.44200692421827775 1.0 ['nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'ENSG00000061938|ENST00000672887|TNK2', 'ENST00000481865.5_1_3:195596955-195610258:-|nuORF', 'nc|ENSG00000061938|Q07912-2|TNK2'] 133719 10757 WLIFYYIQRFL True NCI_RA007_Epitope_Rep5 1560.8493069620401 1560.84820993586 48.015 2 -1.8944902808468167 0.44200692421827775 1.0 ['ENSG00000163162|ENST00000295317|RNF149'] 94242 19578 RWRLPLTCLLL True NCI_RA007_Epitope_Rep3 1382.82204666838 1382.8204049037902 85.396 3 -1.8945558779678138 0.44200692421827775 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 64828 9922 LSAGDGKH True H1975_Epitope_Rep3 783.3875161872302 783.38696496793 43.197 1 -1.8946685716559832 0.44200692421827775 1.0 ['ENST00000589029.1_3_19:38893832-38894179:+|nuORF'] 79287 20406 PGHSPVPH True NCI_RA007_Epitope_Rep5 826.4085859849802 826.40748993586 85.425 2 -1.8946694180873496 0.44200692421827775 1.0 ['ENST00000469140.2_1_14:105933129-105933369:+|nuORF'] 69592 1378 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 7.1756 3 -1.89476036922442 0.44200692421827775 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 136734 4332 YIMNYIMYIF True NCI_RA007_Epitope_Rep1 1369.6450533928498 1369.64341490379 20.956 3 -1.8948105831165283 0.44200692421827775 1.0 ['nc|ENSG00000109572|P51790-2|CLCN3', 'nc|ENSG00000109572|P51790-4|CLCN3', 'nc|ENSG00000109572|P51790-5|CLCN3', 'ENSG00000109572|ENST00000513761|CLCN3'] 71458 15898 MKEMGRNQ True PC9_epitope_Rep1 992.4531703022399 992.45206993586 65.962 2 -1.8948625941929897 0.44200692421827775 1.0 ['nc|ENSG00000160097|Q8NAU1-4|FNDC5', 'nc|ENSG00000160097|Q8NAU1-3|FNDC5', 'nc|ENSG00000160097|Q8NAU1-2|FNDC5', 'ENSG00000160097|ENST00000373471|FNDC5'] 120895 15263 VGDYGSLS True PC9_epitope_Rep3 796.36029837988 796.35920993586 63.859 2 -1.8948893736147743 0.44200692421827775 1.0 ['ENST00000488395.1_1_20:57572656-57581383:-|nuORF', 'ENSG00000101160|ENST00000217131|CTSZ'] 41500 16679 ICYMHNKI True NCI_RA007_Epitope_Rep5 1020.4884931818 1020.48738993586 70.922 2 -1.8950124391567549 0.44200692421827775 1.0 ['ACOT9-APOO|2|fusion', 'ENSG00000123130|ENST00000379303|ACOT9', 'nc|ENSG00000123130|Q9Y305-3|ACOT9', 'ACOT9-APOO|1|fusion', 'nc|ENSG00000123130|Q9Y305-2|ACOT9', 'nc|ENSG00000123130|Q9Y305|ACOT9'] 26976 23361 FLKNFLMLKV True PC9_epitope_Rep4 1251.74133673619 1251.73969490379 98.115 3 -1.895023975289589 0.44200692421827775 1.0 ['ENST00000433419.2_3_17:20268846-20268972:+|nuORF'] 69595 1599 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 8.3142 3 -1.8950795977306707 0.44200692421827775 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 61789 5905 LLKKVALFSKL True PC9_epitope_Rep1 1258.8376796491798 1258.83658993586 27.529 2 -1.8951781919397581 0.4420240476556833 1.0 ['nc|ENSG00000174678|A6NHR8|FAM47DP'] 26864 20433 FLFAQCQT True NCI_RA007_Epitope_Rep5 956.4425885351999 956.44148993586 85.532 2 -1.8953291304561133 0.4420301801356238 1.0 ['ENST00000539664.2_1_7:28994760-28994901:-|nuORF'] 118426 24285 VDPETGDL True H1975_Epitope_Rep2 844.3814277472799 844.38032993586 99.937 2 -1.8958256156570679 0.44204140841355666 1.0 ['ENSG00000005421|ENST00000222381|PON1'] 29046 10193 FTLYLTYEL True NCI_RA007_Epitope_Rep3 1161.59577761797 1161.59468993586 47.177 2 -1.895910619946203 0.44204140841355666 1.0 ['nc|ENSG00000066427|P54252-1|ATXN3'] 42924 21019 IFWLSFLKSL True PC9_epitope_Rep6 1252.7219811906 1252.7208899358602 93.674 2 -1.8959615843176734 0.44204140841355666 1.0 ['ENSG00000196730|ENST00000408954|DAPK1', 'nc|ENSG00000196730|P53355-3|DAPK1', 'DAPK1|p.Y1275Tfs*31|1|0.46|ENSG00000196730|chr9:87706887-87706887|G/-|frameshift_variant'] 66651 10764 LSSSEEERFI True H1975_Epitope_Rep1 1195.57208205127 1195.57098993586 46.365 2 -1.8960890621180044 0.44204140841355666 1.0 ['ENST00000426841.6_1_6:138768126-138820433:-|nuORF', 'ENSG00000135540|ENST00000343505|NHSL1', 'nc|ENSG00000135540|Q5SYE7|NHSL1'] 87241 23730 QSQLREKKYLE True PC9_epitope_Rep1 1420.76742781288 1420.76632993586 96.07 2 -1.8961524041218074 0.44204140841355666 1.0 ['ENSG00000196604|ENST00000409914|POTEF'] 101400 1496 SNDQDDDD True NCI_RA007_Epitope_Rep4 922.2788131535399 922.27770993586 8.3742 2 -1.8962406463067332 0.44204140841355666 1.0 ['ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'DST|p.T4677Lfs*9|1|0.52|ENSG00000151914|chr6:56555820-56555820|G/-|frameshift_variant', 'DST|p.E3668Kfs*4|1|0.2|ENSG00000151914|chr6:56600128-56600128|C/-|frameshift_variant', 'nc|ENSG00000151914|Q03001-9|DST', 'DST|p.S2695Afs*6|1|0.27|ENSG00000151914|chr6:56605912-56605912|T/-|frameshift_variant'] 21976 5131 ESLRQNTSW True NCI_RA007_Epitope_Rep2 1119.53088594563 1119.5297899358602 24.581 2 -1.8963609146937714 0.44204140841355666 1.0 ['SCAPER|p.W503L|1|0.4|ENSG00000140386|chr15:76765442-76765442|C/A|missense_variant'] 97512 18823 SGPSLKMP True H1975_Epitope_Rep2 815.42112481463 815.4205749679301 78.157 1 -1.8964080671532155 0.44204140841355666 1.0 ['ENSG00000124942|ENST00000378024|AHNAK'] 134437 27207 WTHGAQGG True H1975_Epitope_Rep2 812.3565504121198 812.35544993586 112.41 2 -1.8964085873729786 0.44204140841355666 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 48128 24832 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 103.28 3 -1.8968026104267683 0.44208050814862027 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 48633 8342 KEITEGDEVEV True PC9_epitope_Rep1 1246.5928770655 1246.59178993586 36.921 2 -1.8969815820688796 0.44208305403237325 1.0 ['TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion'] 3511 16626 AGLRKSPF True PC9_epitope_Rep3 874.5024863698198 874.50138993586 69.088 2 -1.897108208014245 0.44208305403237325 1.0 ['ENST00000347970.7_1_15:102182621-102182681:-|nuORF'] 108066 16493 TDKRKKKG True NCI_RA007_Epitope_Rep3 959.5876129761098 959.58650993586 72.671 2 -1.897110764388669 0.44208305403237325 1.0 ['nc|ENSG00000105948|A0AVF1-2|IFT56', 'nc|ENSG00000105948|A0AVF1-3|IFT56', 'ENSG00000105948|ENST00000464848|TTC26', 'ENST00000481482.5_1_7:138818528-138853308:+|nuORF'] 134988 23632 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 98.225 2 -1.8972432515679114 0.44208305403237325 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 68876 6552 LVEGLADVP True NCI_RA007_Epitope_Rep2 911.4963979298699 911.49530993586 30.098 2 -1.8973846892568458 0.44208918485308013 1.0 ['ZSCAN18|p.L131P|2|0.26|ENSG00000121413|chr19:58089876-58089876|A/G|missense_variant'] 61540 12514 LLGFKREL True PC9_epitope_Rep1 974.5913013742198 974.59020993586 53.003 2 -1.897631033727153 0.4421029500631764 1.0 ['ENSG00000183019|ENST00000333598|MCEMP1', 'nc|ENSG00000183019|Q8IX19|MCEMP1'] 8604 13851 AVAGENARVI True PC9_epitope_Rep2 998.5508931142199 998.54978993586 58.563 2 -1.8979003484357806 0.4421029500631764 1.0 ['ENSG00000184672|ENST00000521268|RALYL', 'nc|ENSG00000184672|Q86SE5-3|RALYL'] 56773 8462 LEARLSSAA True PC9_epitope_Rep3 916.4977949122 916.49668993586 37.511 2 -1.8979047803470137 0.4421029500631764 1.0 ['ENSG00000188112|ENST00000341865|C6orf132'] 80269 7402 PLDQYSPSFP True PC9_epitope_Rep1 1149.5342399905699 1149.5331499358601 33.285 2 -1.8979597203506389 0.4421029500631764 1.0 ['nc|ENSG00000077782|P11362-21|FGFR1', 'ENSG00000077782|ENST00000447712|FGFR1', 'nc|ENSG00000077782|P11362-19|FGFR1', 'nc|ENSG00000077782|P11362-2|FGFR1', 'nc|ENSG00000077782|P11362-7|FGFR1', 'nc|ENSG00000077782|P11362-20|FGFR1', 'nc|ENSG00000077782|P11362-4|FGFR1', 'BAG4-FGFR1|1|fusion', 'BAG4-FGFR1|2|fusion', 'ENST00000526570.5_1_8:38271148-38285795:-|nuORF', 'nc|ENSG00000077782|P11362-3|FGFR1', 'nc|ENSG00000077782|P11362-14|FGFR1', 'nc|ENSG00000077782|P11362-5|FGFR1', 'nc|ENSG00000077782|P11362-6|FGFR1', 'ENST00000531196.5_1_8:38271148-38271684:-|nuORF', 'WHSC1L1-FGFR1|2|fusion', 'WHSC1L1-FGFR1|1|fusion', 'WHSC1L1-FGFR1|4|fusion', 'WHSC1L1-FGFR1|3|fusion'] 49267 17816 KHERKDKRS True NCI_RA007_Epitope_Rep4 1182.6581521474197 1182.65650490379 77.137 3 -1.8980305571803273 0.4421029500631764 1.0 ['nc|ENSG00000212719|A8MQB3|LINC02693'] 16968 18589 EGGVSCVE True PC9_epitope_Rep5 778.31671931574 778.31617496793 76.527 1 -1.8981951135397308 0.4421029500631764 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 843 11192 ADGAHGMR True H1975_Epitope_Rep2 813.35517051313 813.35462496793 48.09 1 -1.8982632306955856 0.4421029500631764 1.0 ['ENSG00000171873|ENST00000379453|ADRA1D'] 39456 25043 HNFLWSFKV True PC9_epitope_Rep4 1176.60801406752 1176.60637490379 104.89 3 -1.898279835227932 0.4421029500631764 1.0 ['ENST00000600588.1_1_19:6593880-6593970:+|nuORF'] 99350 23129 SLDRVKVLVL True H1975_Epitope_Rep2 1140.7230438197598 1140.72194993586 95.426 2 -1.8983159715170745 0.4421029500631764 1.0 ['ENSG00000144840|ENST00000273375|RABL3', 'ENST00000491398.5_1_3:120457479-120461354:-|nuORF'] 48067 938 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 4.8954 3 -1.8983416629485708 0.4421029500631764 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 78446 23128 PCKTPILK True PC9_epitope_Rep1 898.5310096167799 898.52990993586 93.756 2 -1.8983443944061826 0.4421029500631764 1.0 ['ENSG00000177853|ENST00000316045|ZNF518A', 'ZNF518A|p.L1107Ffs*8|1|0.21|ENSG00000177853|chr10:96159635-96159636|-/T|frameshift_variant', 'nc|ENSG00000177853|Q6AHZ1-2|ZNF518A'] 78667 8433 PEASALPLARD True NCI_RA007_Epitope_Rep1 1138.59823722946 1138.5971499358602 36.804 2 -1.8983911493762153 0.4421029500631764 1.0 ['ENST00000435680.5_1_15:31283038-31283785:-|nuORF'] 121574 9594 VGKTKKRT True NCI_RA007_Epitope_Rep1 916.5817993196799 916.58070993586 41.315 2 -1.8984497565943332 0.4421029500631764 1.0 ['ENSG00000130477|ENST00000519716|UNC13A'] 30770 23210 GAPEPPAAAR True PC9_epitope_Rep5 935.4824792012298 935.4819349679301 94.258 1 -1.898474091623818 0.4421090797222466 1.0 ['nc|ENSG00000099834|Q9HBB8-2|CDHR5', 'nc|ENSG00000099834|Q9HBB8-4|CDHR5', 'ENSG00000099834|ENST00000397542|CDHR5'] 47900 23204 IYVHKPPVHI True PC9_epitope_Rep5 1201.69716342509 1201.69552490379 94.235 3 -1.8985254929876552 0.44211035179854535 1.0 ['ENSG00000149136|ENST00000278412|SSRP1', 'ENST00000293880.9_1_11:57098199-57100416:-|nuORF'] 103952 22305 SRPRKIVDR True H1975_Epitope_Rep2 1125.6730739355698 1125.67141490379 92.18 3 -1.898530191644534 0.44211035179854535 1.0 ['nc|ENSG00000049449|Q15293-2|RCN1'] 121154 7691 VGGGRQRPPQ True H1975_Epitope_Rep1 1050.56827451386 1050.5671699358602 34.549 2 -1.8988394475450465 0.44214944132543754 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A'] 121066 14431 VGFSRVIHTI True PC9_epitope_Rep6 1127.64512785223 1127.64402993586 67.403 2 -1.8989729957116706 0.44216215028723954 1.0 ['PARN|p.A276T|1|0.21|ENSG00000140694|chr16:14599918-14599918|C/T|missense_variant'] 32301 14878 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 63.899 2 -1.8992278736010497 0.44216215028723954 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 61766 20704 LLKERLEKFFH True H1975_Epitope_Rep1 1458.8347195270599 1458.83362993586 86.057 2 -1.899299364948011 0.44216215028723954 1.0 ['ENST00000411858.1_1_7:6854458-6863725:-|nuORF', 'ENSG00000146574|ENST00000316731|CCZ1B', 'ENSG00000122674|ENST00000325974|CCZ1', 'ENST00000490178.1_1_7:6854391-6861977:-|nuORF'] 45625 16098 ISHHIPATAPP True PC9_epitope_Rep1 1139.60874234351 1139.60710490379 66.737 3 -1.8993027308491108 0.44216215028723954 1.0 ['ENSG00000157450|ENST00000348370|RNF111', 'nc|ENSG00000157450|Q6ZNA4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-4|RNF111', 'nc|ENSG00000157450|Q6ZNA4-3|RNF111'] 130228 9564 VTSLPHMC True NCI_RA007_Epitope_Rep2 886.4040948515001 886.4035449679301 41.816 1 -1.899325489277499 0.44216215028723954 1.0 ['nc|ENSG00000185973|Q9NVH6-3|TMLHE'] 30518 4767 GAHVLPPL True NCI_RA007_Epitope_Rep4 802.47012361238 802.46902993586 24.769 2 -1.8994825103885504 0.44216215028723954 1.0 ['ENST00000340957.9_1_3:184062770-184063025:+|nuORF'] 68123 6098 LTPGESSK True NCI_RA007_Epitope_Rep1 817.41814760917 817.41704993586 27.758 2 -1.8996139512577943 0.44216215028723954 1.0 ['ENSG00000006432|ENST00000554752|MAP3K9', 'nc|ENSG00000006432|P80192-4|MAP3K9'] 84508 11801 QGSQETLIPPR True H1975_Epitope_Rep3 1224.64625005104 1224.6451499358602 50.539 2 -1.8996453716074477 0.44216215028723954 1.0 ['ENSG00000081248|ENST00000362061|CACNA1S', 'CACNA1S|p.G158Sfs*29|1|0.37|ENSG00000081248|chr1:201092040-201092042|CCG/AA|frameshift_variant'] 38450 21828 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 90.27 2 -1.89965757212908 0.44216215028723954 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 38653 21839 HHMGVRYIE True NCI_RA007_Epitope_Rep3 1140.5498475684 1140.54820490379 94.871 3 -1.8996715583656592 0.44216215028723954 1.0 ['ENSG00000103067|ENST00000473183|ESRP2', 'nc|ENSG00000103067|Q9H6T0|ESRP2'] 80070 17149 PKGKRSLN True NCI_RA007_Epitope_Rep5 898.5348491272599 898.53374993586 72.734 2 -1.8997348694547695 0.44216215028723954 1.0 ['NPVF|p.E54K|2|0.22|ENSG00000105954|chr7:25227005-25227005|C/T|missense_variant'] 136847 18138 YIVRGLLHR True H1975_Epitope_Rep2 1125.6770966868498 1125.67546490379 75.176 3 -1.8998444854333896 0.44216215028723954 1.0 ['IQCH|p.S577R|1|0.37|ENSG00000103599|chr15:67395389-67395389|C/A|missense_variant'] 69590 1239 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 6.4715 3 -1.899915095040335 0.44216215028723954 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 66396 5349 LSREHYDHQRM True NCI_RA007_Epitope_Rep1 1470.67862989182 1470.67752993586 24.884 2 -1.8999636759303757 0.44216215028723954 1.0 ['nc|ENSG00000108963|Q9BZG8-2|DPH1', 'ENSG00000108963|ENST00000263083|DPH1', 'nc|ENSG00000108963|Q9BZG8-1|DPH1', 'ENST00000572214.5_1_17:1940203-1943704:+|nuORF'] 44781 11244 IPTLSSFNLFS True H1975_Epitope_Rep2 1224.63903941228 1224.6379499358602 48.294 2 -1.8999820551581899 0.44216215028723954 1.0 ['ENSG00000179630|ENST00000325686|LACC1'] 124319 10684 VLDPSSIVPL True H1975_Epitope_Rep1 1038.5961119711399 1038.5950099358602 46.055 2 -1.9000199424539725 0.44216215028723954 1.0 ['nc|ENSG00000144744|Q8TBC4-2|UBA3', 'ENSG00000144744|ENST00000361055|UBA3', 'ENST00000461522.1_1_3:69110938-69112631:-|nuORF'] 103022 17115 SQKHTRIL True NCI_RA007_Epitope_Rep5 981.5719629119699 981.57086993586 72.606 2 -1.9000840467935611 0.44216215028723954 1.0 ['ENSG00000172167|ENST00000305949|MTBP'] 16773 4021 EFFFSFMQG True PC9_epitope_Rep5 1138.4793679667398 1138.47826993586 20.546 2 -1.9000922732556977 0.44216215028723954 1.0 ['ENST00000409150.7_2_2:191383468-191383507:-|nuORF'] 81282 22475 PPPYHDAL True H1975_Epitope_Rep3 908.43921740692 908.43812993586 93.949 2 -1.9001267316917982 0.44216215028723954 1.0 ['ENSG00000178233|ENST00000451188|TMEM151B'] 59133 20122 LGEPVHPRV True PC9_epitope_Rep4 1002.5610638750999 1002.55996993586 85.534 2 -1.9002552629840295 0.44216215028723954 1.0 ['ENST00000445755.6_1_19:18054520-18054739:+|nuORF'] 87670 8329 QVCDWLYP True PC9_epitope_Rep5 1022.4531532188998 1022.4525749679301 36.978 1 -1.9003058923712444 0.4421634208763085 1.0 ['ENST00000495510.1_1_13:36900679-36920374:-|nuORF', 'ENSG00000133104|ENST00000438666|SPART'] 55347 9094 LASHGRVL True PC9_epitope_Rep3 851.49773534255 851.49662993586 39.92 2 -1.9003132040842847 0.4421634208763085 1.0 ['ENST00000379066.5_1_2:37543393-37543606:-|nuORF'] 125218 14004 VLQPQRVL True PC9_epitope_Rep4 951.5865503469498 951.58544993586 61.775 2 -1.9005428699548712 0.44218919898513953 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 82663 23801 PVLVIVLVVLW True NCI_RA007_Epitope_Rep3 1248.8209669558798 1248.8193149037902 103.15 3 -1.9006069907744714 0.44218919898513953 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15', 'ENST00000482827.1_1_X:74722059-74742841:-|nuORF'] 13912 25469 DRDVLIVLVR True PC9_epitope_Rep2 1196.7241064489199 1196.72300993586 103.65 2 -1.900712438098669 0.44218919898513953 1.0 ['ADCY9-PRKCB|2|fusion', 'nc|ENSG00000166501|P05771|PRKCB', 'ADCY9-PRKCB|1|fusion', 'PRKCB|p.G537Wfs*6|1|0.14|ENSG00000166501|chr16:24185184-24185185|-/T|frameshift_variant', 'ENSG00000166501|ENST00000643927|PRKCB', 'PRKCB|p.D179N|1|0.24|ENSG00000166501|chr16:24092796-24092796|G/A|missense_variant'] 90003 11722 RGDGTRAH True PC9_epitope_Rep4 868.42636130744 868.42526993586 52.85 2 -1.9007614013769578 0.44218919898513953 1.0 ['ENST00000447600.1_1_1:11159806-11161858:+|nuORF'] 33153 23812 GKQLSLHELT True PC9_epitope_Rep5 1124.61897267404 1124.6183749679299 96.574 1 -1.900793128233278 0.44218919898513953 1.0 ['ENSG00000166886|ENST00000300131|NAB2', 'nc|ENSG00000166886|Q15742-3|NAB2'] 18635 22668 ELANTAKA True PC9_epitope_Rep3 816.4341320264799 816.4335849679301 92.464 1 -1.900829642692851 0.44218919898513953 1.0 ['nc|ENSG00000122966|O14578|CIT', 'ENSG00000122966|ENST00000392521|CIT', 'nc|ENSG00000122966|O14578-3|CIT', 'ENST00000545913.5_1_12:120126039-120222037:-|nuORF', 'ENST00000537607.5_1_12:120126039-120222037:-|nuORF', 'APPL2-CIT|1|fusion'] 72550 19063 MVGSLAPQGL True PC9_epitope_Rep5 971.5110024481899 971.50990993586 78.355 2 -1.9008759255370635 0.44219532554257096 1.0 ['ENST00000394272.7_1_15:91474205-91474256:-|nuORF'] 73628 23238 NGHNFSIG True PC9_epitope_Rep2 844.38276515996 844.38166993586 94.868 2 -1.9009651481081566 0.44220757825370677 1.0 ['ENST00000589530.5_1_18:61022616-61034411:-|nuORF'] 115077 4604 TTTFLPEDFTY True NCI_RA007_Epitope_Rep2 1333.6077988536497 1333.6067099358602 22.535 2 -1.9010749003913974 0.44220757825370677 1.0 ['ENSG00000158470|ENST00000371711|B4GALT5'] 140213 20908 YWKAFKKF True PC9_epitope_Rep6 1116.6120368187997 1116.6109299358602 93.195 2 -1.9012572980097804 0.4422088476914291 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant'] 35751 4755 GTTVNNLEETP True NCI_RA007_Epitope_Rep5 1173.5513466066898 1173.5502499358602 24.974 2 -1.9012748643180024 0.4422088476914291 1.0 ['nc|ENSG00000078674|Q15154-2|PCM1', 'ENSG00000078674|ENST00000325083|PCM1', 'nc|ENSG00000078674|Q15154-4|PCM1'] 113928 12893 TRINISLLKYQ True NCI_RA007_Epitope_Rep1 1347.7874349814701 1347.78632993586 54.143 2 -1.9014052623598636 0.4422259563111594 1.0 ['ENST00000515764.2_1_4:25930809-25931061:+|nuORF'] 40200 24713 HRGRVLHLSL True PC9_epitope_Rep4 1186.70470841702 1186.7036099358602 103.55 2 -1.901512338461824 0.44222722530338804 1.0 ['nc|ENSG00000164287|Q86Y33-3|CDC20B', 'nc|ENSG00000164287|Q86Y33-2|CDC20B', 'ENSG00000164287|ENST00000381375|CDC20B'] 35294 22161 GSRGHCGP True PC9_epitope_Rep2 769.32895576529 769.32840496793 90.73 1 -1.9015129357879113 0.44222722530338804 1.0 ['nc|ENSG00000176623|Q96DB5-3|RMDN1', 'nc|ENSG00000176623|Q96DB5-2|RMDN1', 'ENSG00000176623|ENST00000406452|RMDN1'] 69607 3073 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 15.641 3 -1.9018713826147762 0.4422333509049376 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 93746 16113 RTRRSIFENLM True H1975_Epitope_Rep1 1421.7561519365297 1421.7550499358601 67.322 2 -1.9019395205228837 0.442234619692943 1.0 ['ENSG00000087053|ENST00000346299|MTMR2', 'nc|ENSG00000087053|Q13614-2|MTMR2'] 54846 4112 LAGASPLH True NCI_RA007_Epitope_Rep5 764.4180880395202 764.41698993586 22.304 2 -1.902117476392154 0.442234619692943 1.0 ['ENST00000360121.4_1_16:29677771-29678056:+|nuORF'] 94321 21815 RWVSPAHH True H1975_Epitope_Rep2 988.4991323248801 988.49802993586 90.221 2 -1.9023497506938465 0.4422384257225687 1.0 ['ENST00000606273.3_1_6:29692860-29693788:+|nuORF'] 76138 17657 NRQQKVIP True NCI_RA007_Epitope_Rep1 981.5719629119699 981.57086993586 72.817 2 -1.9024388391193665 0.4422384257225687 1.0 ['nc|ENSG00000115459|Q96FG2-6|ELMOD3', 'ENST00000423095.7_1_2:85614321-85618082:+|nuORF', 'ENST00000410106.5_1_2:85598540-85618082:+|nuORF', 'ENSG00000115459|ENST00000409013|ELMOD3', 'ENST00000490508.5_1_2:85582731-85618082:+|nuORF'] 81284 23666 PPPYHDAL True NCI_RA007_Epitope_Rep5 908.43921740692 908.43812993586 98.362 2 -1.9024898718165093 0.4422384257225687 1.0 ['ENSG00000178233|ENST00000451188|TMEM151B'] 69599 1894 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 9.8296 3 -1.9025374777229924 0.4422384257225687 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 91013 25432 RLKKKHEL True NCI_RA007_Epitope_Rep3 1050.66619764998 1050.66510993586 109.94 2 -1.9026149403583021 0.4422384257225687 1.0 ['nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-5|PPFIA2', 'nc|ENSG00000139220|O75334-4|PPFIA2', 'nc|ENSG00000139220|O75334-7|PPFIA2', 'nc|ENSG00000139220|O75334-8|PPFIA2'] 71652 9438 MLRSALKI True NCI_RA007_Epitope_Rep5 930.5684577546599 930.56736993586 42.942 2 -1.902648743548957 0.4422384257225687 1.0 ['ENST00000274030.10_1_4:120169963-120177431:+|nuORF'] 117611 18576 VAGVMAYL True NCI_RA007_Epitope_Rep1 822.4309612223399 822.43041496793 76.395 1 -1.902804127619032 0.4422445505957283 1.0 ['nc|ENSG00000174837|Q14246-4|ADGRE1', 'nc|ENSG00000174837|Q14246-5|ADGRE1', 'nc|ENSG00000174837|Q14246-2|ADGRE1', 'nc|ENSG00000174837|Q14246-3|ADGRE1', 'ENSG00000174837|ENST00000312053|ADGRE1'] 99016 2442 SKPKYYFAWT True NCI_RA007_Epitope_Rep2 1289.6444591458899 1289.64280490379 13.363 3 -1.9032281806300293 0.44229459952122635 1.0 ['ENSG00000172197|ENST00000324607|MBOAT1', 'nc|ENSG00000172197|Q6ZNC8-2|MBOAT1'] 21411 5855 ERNHWHYRDLE True H1975_Epitope_Rep1 1553.71237254825 1553.71072490379 27.591 3 -1.9038034972769227 0.4423885710520825 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 80936 24541 PMPMKRGP True H1975_Epitope_Rep1 912.4673638144 912.4662699358599 101.7 2 -1.9038816480590617 0.44239469407475734 1.0 ['RBMXL2|p.G376Efs*4|1|0.33|ENSG00000170748|chr11:7090246-7090246|G/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2'] 117762 25458 VALKPLGGL True PC9_epitope_Rep5 866.5589386167799 866.5583949679301 103.16 1 -1.9042238452813314 0.44243375901788756 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 61767 20582 LLKERLEKFFH True H1975_Epitope_Rep3 1458.8347195270599 1458.83362993586 86.021 2 -1.904400001938578 0.4424398814099045 1.0 ['ENST00000411858.1_1_7:6854458-6863725:-|nuORF', 'ENSG00000146574|ENST00000316731|CCZ1B', 'ENSG00000122674|ENST00000325974|CCZ1', 'ENST00000490178.1_1_7:6854391-6861977:-|nuORF'] 66725 7241 LSTPPPPA True NCI_RA007_Epitope_Rep2 778.42250471362 778.42140993586 32.785 2 -1.9044604226264836 0.4424460036674682 1.0 ['ENSG00000120279|ENST00000367245|MYCT1'] 63396 13572 LPGASHMTR True H1975_Epitope_Rep1 968.4861846826801 968.4856349679301 57.331 1 -1.904570389289579 0.44246436963348484 1.0 ['ENST00000458686.5_1_2:70283008-70310715:-|nuORF'] 79445 5995 PGPLSKQGS True NCI_RA007_Epitope_Rep3 869.46068112749 869.45958993586 30.559 2 -1.9046582268018244 0.44246436963348484 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 124379 14025 VLEALWRI True PC9_epitope_Rep5 998.5913013742199 998.59020993586 58.965 2 -1.904731093535536 0.44246436963348484 1.0 ['ENST00000479722.1_1_10:101373360-101379897:-|nuORF', 'ENSG00000155287|ENST00000370495|SLC25A28'] 128854 18741 VSSLRRSKQV True NCI_RA007_Epitope_Rep3 1158.6833042661 1158.6816449037901 81.947 3 -1.9049577609106705 0.4424814713148504 1.0 ['ENSG00000126860|ENST00000462804|EVI2A', 'nc|ENSG00000126860|P22794-2|EVI2A'] 134594 5329 WWAPRHTP True PC9_epitope_Rep4 1049.51953341629 1049.51842993586 27.213 2 -1.9050076453610836 0.44248759277965655 1.0 ['ENST00000479481.5_1_10:99116853-99131081:-|nuORF'] 60793 20477 LKGWHKRFFV True NCI_RA007_Epitope_Rep2 1316.7505959802797 1316.74948993586 84.723 2 -1.9050816324641102 0.44249983530600145 1.0 ['nc|ENSG00000079156|Q9BZF3-6|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-2|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-4|OSBPL6', 'ENSG00000079156|ENST00000190611|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-3|OSBPL6', 'nc|ENSG00000079156|Q9BZF3-5|OSBPL6', 'OSBPL6|p.Y118*|1|0.14|ENSG00000079156|chr2:178331587-178331593|TTCAAAG/-|frameshift_variant'] 135988 6292 YFFPHPIRTIL True PC9_epitope_Rep2 1402.7761420217796 1402.77448490379 29.6 3 -1.905162611459613 0.44249983530600145 1.0 ['ENST00000463718.5_1_12:21428225-21457481:-|nuORF', 'nc|ENSG00000084453|P46721-2|SLCO1A2'] 134440 26808 WTHGAQGG True H1975_Epitope_Rep3 812.3565504121198 812.35544993586 112.06 2 -1.905535356354631 0.44250109793588055 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 72258 21647 MSCICILS True NCI_RA007_Epitope_Rep5 868.38566790604 868.38456993586 90.357 2 -1.9056861974616217 0.44250109793588055 1.0 ['ENST00000476496.5_3_17:15884366-15884429:-|nuORF'] 82193 9439 PTGAFGKE True PC9_epitope_Rep4 805.39701824177 805.39592993586 43.918 2 -1.9059130162516167 0.4425072188491562 1.0 ['nc|ENSG00000126432|P30044-2|PRDX5', 'nc|ENSG00000126432|P30044-3|PRDX5', 'ENSG00000126432|ENST00000265462|PRDX5', 'nc|ENSG00000126432|P30044-4|PRDX5'] 82943 21953 PWNRTHLYV True PC9_epitope_Rep6 1184.6090766966802 1184.6079699358602 97.359 2 -1.9059942022841554 0.4425194602724987 1.0 ['SEMA3F-RBM6|1|fusion', 'SEMA3F-RBM6|4|fusion', 'SEMA3F-RBM6|3|fusion', 'SEMA3F-RBM6|2|fusion', 'nc|ENSG00000001617|Q13275-2|SEMA3F', 'ENSG00000001617|ENST00000002829|SEMA3F'] 80099 22428 PKGRQRKLWKD True PC9_epitope_Rep6 1410.8208007984197 1410.8197099358601 99.264 2 -1.9060046739232481 0.4425194602724987 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF', 'ENSG00000108349|ENST00000264645|CASC3'] 79259 21873 PGGVRPPQ True PC9_epitope_Rep6 806.43988611326 806.43878993586 97.035 2 -1.9062596996191157 0.4425500614790093 1.0 ['ENST00000468101.5_1_3:183353437-183368104:+|nuORF'] 81555 23741 PREVGGQG True NCI_RA007_Epitope_Rep5 798.3984152240998 798.39730993586 98.664 2 -1.9065651089386595 0.4425500614790093 1.0 ['ENSG00000168264|ENST00000366609|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-2|IRF2BP2', 'nc|ENSG00000168264|Q7Z5L9-3|IRF2BP2'] 13136 10453 DLSPKDKK True H1975_Epitope_Rep3 929.51819600361 929.51708993586 45.268 2 -1.9065672970540068 0.4425500614790093 1.0 ['PDIA5-DIRC2|1|fusion', 'nc|ENSG00000065485|Q14554-2|PDIA5', 'ENSG00000065485|ENST00000316218|PDIA5'] 80909 21487 PMADKPGN True H1975_Epitope_Rep2 828.37998827864 828.37888993586 88.902 2 -1.9065766228937442 0.4425500614790093 1.0 ['nc|ENSG00000075151|O43432|EIF4G3', 'nc|ENSG00000075151|O43432-3|EIF4G3', 'ENSG00000075151|ENST00000602326|EIF4G3', 'nc|ENSG00000075151|O43432-4|EIF4G3'] 118439 10312 VDPSFLAA True PC9_epitope_Rep1 818.4174193331799 818.41632993586 44.549 2 -1.9065969339565074 0.4425500614790093 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 92887 20957 RRNGQRPGL True PC9_epitope_Rep6 1052.5951579680398 1052.59406993586 93.4 2 -1.9066420785641307 0.44255618131717334 1.0 ['ENST00000319836.7_1_10:46089882-46089972:-|nuORF'] 48068 1675 KAQILKRRLVP True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 8.7077 3 -1.906889581043479 0.44256842059039864 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 130821 4172 VVFGNVTA True NCI_RA007_Epitope_Rep4 805.4334037504899 805.43230993586 22.348 2 -1.9070044287458143 0.44256842059039864 1.0 ['ENSG00000089558|ENST00000264661|KCNH4', 'ENSG00000135519|ENST00000257981|KCNH3'] 128753 11114 VSPVTETRTYH True NCI_RA007_Epitope_Rep5 1288.6411646706001 1288.64057496793 49.385 1 -1.9071268719129286 0.4425855179379089 1.0 ['ENST00000441284.5_2_13:46917522-46942212:-|nuORF', 'nc|ENSG00000102445|Q9H714-6|RUBCNL', 'nc|ENSG00000102445|Q9H714-3|RUBCNL', 'nc|ENSG00000102445|Q9H714-4|RUBCNL', 'ENSG00000102445|ENST00000429979|RUBCNL', 'nc|ENSG00000102445|Q9H714-1|RUBCNL'] 82319 17742 PTPTPQVVK True PC9_epitope_Rep2 965.55458151233 965.55348993586 73.527 2 -1.9072246417311627 0.44259163711811006 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-4|MAP4'] 137712 8540 YMRYLMEQD True H1975_Epitope_Rep1 1247.5314801925897 1247.53038993586 37.776 2 -1.9073185105920332 0.4425977561639625 1.0 ['ENST00000480199.1_1_8:28157565-28157883:+|nuORF'] 47960 10547 KACGNGGP True NCI_RA007_Epitope_Rep2 702.31190871882 702.31135496793 45.623 1 -1.907404290345614 0.44260387507547067 1.0 ['ENST00000590000.1_1_19:5591781-5592884:-|nuORF'] 117752 24007 VALKPLGGL True NCI_RA007_Epitope_Rep3 866.5589386167799 866.5583949679301 103.99 1 -1.9074718722240331 0.442609993852639 1.0 ['ENST00000526757.5_1_11:8772174-8772237:-|nuORF'] 121100 14469 VGGCPGDD True NCI_RA007_Epitope_Rep5 718.25920443962 718.25865496793 62.336 1 -1.9075729989317725 0.44261611249547184 1.0 ['ENST00000426654.6_1_16:69599384-69602431:+|nuORF'] 14204 9716 DSTLLIWQ True H1975_Epitope_Rep1 974.5072969667399 974.50618993586 42.3 2 -1.9077316651952019 0.4426441853827746 1.0 ['ENST00000469726.5_1_1:17942561-18023872:+|nuORF', 'nc|ENSG00000074964|Q9HCE6-3|ARHGEF10L', 'nc|ENSG00000074964|Q9HCE6-2|ARHGEF10L', 'ENSG00000074964|ENST00000361221|ARHGEF10L', 'ENST00000495593.1_1_1:18021396-18023872:+|nuORF', 'nc|ENSG00000074964|Q9HCE6-4|ARHGEF10L'] 74961 8642 NLVESAVP True PC9_epitope_Rep6 827.4388830537499 827.43778993586 43.063 2 -1.9078401305735653 0.4426503035159552 1.0 ['ENST00000420642.1_7:74765936-74789271:+|nuORF', 'nc|ENSG00000274523|Q96I51-3|RCC1L', 'ENSG00000274523|ENST00000610322|RCC1L', 'MON2-WBSCR16|1|fusion'] 70642 14890 MCCALWVSGI True NCI_RA007_Epitope_Rep5 1081.4758798927699 1081.4747899358601 63.944 2 -1.908096659523334 0.44267837541163557 1.0 ['ENST00000436880.2_1_1:198868126-198868372:-|nuORF'] 16983 14204 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 61.326 2 -1.9083721457280065 0.4426785498688384 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 133376 23739 WFLNRKIIIH True PC9_epitope_Rep1 1338.79246079226 1338.79081490379 96.105 3 -1.90842668655694 0.4426785498688384 1.0 ['ENST00000311806.7_1_3:38295131-38295401:+|nuORF'] 71535 15137 MKWKYEWKVLH True NCI_RA007_Epitope_Rep4 1546.8118759074998 1546.8107699358602 65.798 2 -1.9086239877390976 0.4426785498688384 1.0 ['F13B|p.G474W|1|0.31|ENSG00000143278|chr1:197052769-197052769|C/A|missense_variant'] 125937 25036 VPAAAPAH True PC9_epitope_Rep5 732.39187329168 732.39132496793 101.44 1 -1.9088460005344439 0.4426785498688384 1.0 ['nc|ENSG00000162849|Q2KJY2-2|KIF26B', 'ENSG00000162849|ENST00000407071|KIF26B'] 94247 20968 RWRLPLTCLLL True NCI_RA007_Epitope_Rep5 1382.82204666838 1382.8204049037902 87.66 3 -1.9089135745914445 0.4426785498688384 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 129759 4719 VTKKVVASP True NCI_RA007_Epitope_Rep4 927.5753169569099 927.57420993586 24.582 2 -1.9089930801057904 0.4426785498688384 1.0 ['nc|ENSG00000105549|Q9P2T0-2|SPMAP2', 'ENSG00000105549|ENST00000342640|THEG'] 52951 20541 KRLKKEKVNVD True H1975_Epitope_Rep2 1355.8248831193498 1355.82378993586 85.099 2 -1.9091723642042253 0.4426785498688384 1.0 ['ENSG00000159352|ENST00000368884|PSMD4', 'nc|ENSG00000159352|P55036-2|PSMD4'] 133369 5754 WFHPTWAQ True PC9_epitope_Rep3 1071.49264996211 1071.4915499358601 27.204 2 -1.9091996837977578 0.4426785498688384 1.0 ['ENSG00000082213|ENST00000325366|C5orf22', 'ENST00000511208.2_1_5:31534421-31538621:+|nuORF'] 118591 22903 VEAFRFAYAKR True H1975_Epitope_Rep1 1356.7302544585198 1356.72914993586 95.246 2 -1.9092434360256432 0.4426785498688384 1.0 ['nc|ENSG00000100031|P19440-2|GGT1', 'nc|ENSG00000133475|P36268-2|GGT2P', 'nc|ENSG00000197421|A6NGU5|GGT3P', 'nc|ENSG00000133475|P36268|GGT2P', 'ENSG00000100031|ENST00000400382|GGT1', 'nc|ENSG00000133475|P36268-3|GGT2P'] 10244 6274 CFIYLSKPGQW True PC9_epitope_Rep6 1340.6587293110397 1340.65762993586 32.639 2 -1.9094897450235537 0.4427066183733948 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 819 21883 ADCMDGSDEE True H1975_Epitope_Rep2 1070.31685553838 1070.3157499358601 90.489 2 -1.9095234091586022 0.4427127350155305 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'ENST00000451724.6_1_12:57597195-57598570:+|nuORF'] 27076 7324 FLPPAPAA True NCI_RA007_Epitope_Rep2 782.4326754744999 782.43156993586 33.111 2 -1.9096285288399775 0.4427188515233998 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 2747 16616 AEVATSPKV True PC9_epitope_Rep6 900.4916469025999 900.49054993586 76.377 2 -1.9099310709677284 0.44272622510014814 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 85301 24734 QKYDRQLRL True PC9_epitope_Rep3 1218.6833042660999 1218.68220993586 100.52 2 -1.9100153536875386 0.44272622510014814 1.0 ['ENST00000562757.5_1_16:66857380-66864856:-|nuORF', 'ENST00000563419.5_1_16:66858748-66864862:-|nuORF', 'ENST00000569963.1_1_16:66860370-66864856:-|nuORF', 'ENST00000564040.6_1_16:66857135-66864856:-|nuORF', 'ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1'] 109006 6919 TEVPSSPSE True NCI_RA007_Epitope_Rep5 931.41345615155 931.4129049679301 33.299 1 -1.910016877253841 0.44272622510014814 1.0 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON', 'nc|ENSG00000159140|P18583-10|SON', 'nc|ENSG00000159140|P18583-3|SON', 'nc|ENSG00000159140|P18583-6|SON'] 13517 22540 DPGLRGPLHW True NCI_RA007_Epitope_Rep3 1146.5934266325398 1146.59179490379 97.977 3 -1.9102630598376742 0.44274943204890416 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 35995 15930 GVCQGWHC True NCI_RA007_Epitope_Rep3 888.3370779208399 888.33598993586 70.32 2 -1.910298368951123 0.44274943204890416 1.0 ['nc|ENSG00000196668|Q6ZV60|LINC00173'] 121758 6142 VGLVQGWG True H1975_Epitope_Rep3 814.43373810366 814.43264993586 28.636 2 -1.9103400560954646 0.4427555477512676 1.0 ['ENST00000584516.5_1_17:73585822-73586164:+|nuORF'] 124569 15025 VLGQGNTA True NCI_RA007_Epitope_Rep3 758.3922672145 758.39116993586 66.563 2 -1.9103841671341308 0.44276166331939554 1.0 ['ENSG00000165072|ENST00000377182|MAMDC2'] 8967 21663 AVHASTTA True PC9_epitope_Rep6 756.3766171503601 756.37552993586 96.211 2 -1.9104112805343516 0.44276199567683816 1.0 ['ENST00000591590.1_1_19:55997307-55997553:+|nuORF'] 114494 11603 TSFLGPRSF True PC9_epitope_Rep4 1010.5185303567799 1010.51742993586 52.392 2 -1.9107246314499575 0.44276199567683816 1.0 ['nc|ENSG00000115107|Q658P3-4|STEAP3'] 93572 15453 RSRWERQDRRW True H1975_Epitope_Rep3 1629.8348877227697 1629.83378993586 64.854 2 -1.9107442204437362 0.44276199567683816 1.0 ['ENST00000541775.5_1_12:7270875-7271013:+|nuORF'] 58646 19945 LFGQIRRR True H1975_Epitope_Rep3 1044.6304808476 1044.6293899358602 83.475 2 -1.9108112028214883 0.44276199567683816 1.0 ['ENST00000368439.5_1_1:154947175-154947271:+|nuORF'] 59895 18220 LHHGPLCL True H1975_Epitope_Rep3 888.46399268612 888.46288993586 76.358 2 -1.9108314200039396 0.44276199567683816 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 82287 23741 PTPHCSHS True H1975_Epitope_Rep2 864.3548361599601 864.35372993586 97.82 2 -1.910858581269327 0.44276199567683816 1.0 ['ENST00000360535.8_1_19:36523251-36523727:-|nuORF'] 64354 22333 LQNTRPSWR True PC9_epitope_Rep4 1156.6101393258398 1156.6090499358602 94.141 2 -1.9110152237033922 0.44276199567683816 1.0 ['ENST00000361203.7_2_6:56338781-56340960:-|nuORF'] 57971 12576 LEQRILQVL True H1975_Epitope_Rep1 1110.67609362734 1110.6749899358601 53.42 2 -1.9110498423628213 0.44276199567683816 1.0 ['nc|ENSG00000124256|Q9H171-5|ZBP1', 'ENST00000480037.1_1_20:56191111-56195351:-|nuORF', 'ENST00000432548.2_1_20:56190212-56195528:-|nuORF', 'ENST00000461547.5_1_20:56191111-56191654:-|nuORF', 'nc|ENSG00000124256|Q9H171-6|ZBP1', 'nc|ENSG00000124256|Q9H171-3|ZBP1', 'nc|ENSG00000124256|Q9H171-4|ZBP1', 'ENSG00000124256|ENST00000371173|ZBP1', 'nc|ENSG00000124256|Q9H171-2|ZBP1', 'ZBP1|p.E24Q|1|0.07|ENSG00000124256|chr20:57616433-57616433|C/G|missense_variant'] 129859 11526 VTLLVLDG True NCI_RA007_Epitope_Rep5 828.49566965388 828.49456993586 50.986 2 -1.9111340499820437 0.44276199567683816 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000174827|Q5T2W1-2|PDZK1'] 52181 15918 KMDNSRDLN True PC9_epitope_Rep4 1091.5029569456299 1091.50184993586 69.155 2 -1.9111489612543477 0.44276199567683816 1.0 ['CON__Q9NSB2', 'ENSG00000161849|ENST00000257951|KRT84', 'CON__Q6ISB0', 'ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386', 'CON__Q61726', 'nc|ENSG00000290966|A6NCN2|KRT87P'] 123992 25280 VKKRKEKTA True PC9_epitope_Rep2 1086.6873270173799 1086.6862299358602 102.91 2 -1.9111817846123853 0.44276199567683816 1.0 ['ENSG00000124784|ENST00000379834|RIOK1'] 89766 27214 RFCHHQAC True PC9_epitope_Rep3 1000.4119741966 1000.41086993586 112.0 2 -1.9111849075725 0.44276199567683816 1.0 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|115|3|sense', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|121|3|sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|130|3|sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|103|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|150|3|sense', 'L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|123|3|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|21|1|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|119|3|sense'] 130775 24359 VVEFQQTV True NCI_RA007_Epitope_Rep5 948.4916469026 948.49054993586 101.16 2 -1.9112493605791523 0.44276199567683816 1.0 ['ENST00000536416.5_1_12:121783870-121790143:-|nuORF'] 28564 8213 FSLVAPGLP True H1975_Epitope_Rep1 899.5116540711898 899.51054993586 36.533 2 -1.9112910351515322 0.44276199567683816 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.N341Ifs*23|1|0.12|ENSG00000130589|chr20:63569211-63569214|TAGT/-|frameshift_variant'] 91718 19748 RPHLVLRAQ True NCI_RA007_Epitope_Rep4 1088.65669559544 1088.65558993586 85.34 2 -1.9113786548204457 0.44276199567683816 1.0 ['ENST00000531896.5_1_8:145541583-145550314:-|nuORF'] 28546 19808 FSKTRSKDI True PC9_epitope_Rep2 1080.5927579262 1080.5916699358602 81.581 2 -1.9114017716580907 0.44276199567683816 1.0 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3', 'MCM3|p.D348Tfs*6|1|0.23|ENSG00000112118|chr6:52277556-52277556|C/-|frameshift_variant', 'ENST00000476448.1_1_6:52141011-52144220:-|nuORF'] 38199 23008 HETGHVLG True H1975_Epitope_Rep3 848.41406528824 848.41296993586 96.107 2 -1.9114121231607548 0.44276199567683816 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 29885 22117 FVYKVPISLY True NCI_RA007_Epitope_Rep4 1227.69034670915 1227.68869490379 95.92 3 -1.911703157285211 0.44276199567683816 1.0 ['ENST00000316793.7_1_3:8794494-8794584:-|nuORF'] 126902 15472 VPTVPVKN True PC9_epitope_Rep6 852.50690304392 852.5063549679301 71.685 1 -1.9118797637571772 0.4427632517363588 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 82416 21525 PVAPCKKL True PC9_epitope_Rep4 854.5047948689399 854.50368993586 90.976 2 -1.9118910928647204 0.4427632517363588 1.0 ['nc|ENSG00000198003|A5D8V7-2|ODAD3'] 22591 17296 ETPLLKNDP True PC9_epitope_Rep4 1025.53932537101 1025.53822993586 74.532 2 -1.9119664725436059 0.4427645077407533 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 130194 21434 VTSAAGHA True PC9_epitope_Rep6 712.35040240252 712.34985496793 95.321 1 -1.9119720136878557 0.4427645077407533 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF'] 134593 4235 WWAPRHTP True PC9_epitope_Rep2 1049.51953341629 1049.51842993586 21.617 2 -1.912131511296482 0.4427706216672884 1.0 ['ENST00000479481.5_1_10:99116853-99131081:-|nuORF'] 36786 19905 GVPHLVSG True PC9_epitope_Rep3 764.4180880395201 764.41698993586 81.807 2 -1.912240943232913 0.4427767354596623 1.0 ['ENST00000434316.6_1_13:114193706-114203864:+|nuORF', 'ENST00000460039.5_1_13:114200078-114203864:+|nuORF'] 33997 22471 GNGVLQVS True PC9_epitope_Rep2 772.40791727864 772.40682993586 91.923 2 -1.9127825745001923 0.4427938207671377 1.0 ['ENST00000376259.6_1_1:12267561-12267786:+|nuORF'] 13699 4938 DQGPTFDYS True PC9_epitope_Rep3 1028.40870512428 1028.4076099358601 24.086 2 -1.912853222214544 0.44280730240926847 1.0 ['nc|ENSG00000158850|O60512-2|B4GALT3', 'ENST00000493164.5_1_1:161144758-161146233:-|nuORF', 'ENST00000470882.5_1_1:161143647-161146009:-|nuORF', 'ENSG00000158850|ENST00000319769|B4GALT3'] 110745 13647 TKGLVPKG True NCI_RA007_Epitope_Rep4 798.4963383602199 798.49524993586 59.714 2 -1.9130276479569024 0.44280730240926847 1.0 ['ENSG00000155542|ENST00000285947|SETD9', 'nc|ENSG00000155542|Q8NE22-2|SETD9', 'ENST00000475908.5_1_5:56205193-56212726:+|nuORF'] 101583 17618 SPEEFEYQRSY True H1975_Epitope_Rep1 1433.60992411197 1433.60882993586 73.309 2 -1.9130599900134868 0.44280730240926847 1.0 ['PDE4D-DEPDC1B|2|fusion', 'ENSG00000035499|ENST00000265036|DEPDC1B'] 80092 15884 PKGRAPPR True NCI_RA007_Epitope_Rep4 877.5246187967299 877.52352993586 68.967 2 -1.9131475212660063 0.44280730240926847 1.0 ['nc|ENSG00000125746|O95834-2|EML2', 'nc|ENSG00000125746|O95834-3|EML2', 'ENST00000585386.1_1_19:46145287-46148597:-|nuORF'] 35788 14954 GTWFWATD True NCI_RA007_Epitope_Rep1 982.4184819623399 982.41738993586 62.229 2 -1.9131918680025917 0.4428085573230938 1.0 ['ENSG00000198932|ENST00000537097|GPRASP1'] 12726 12581 DLGDGVPVKS True PC9_epitope_Rep2 985.50802524273 985.50692993586 53.699 2 -1.913305208512409 0.4428085573230938 1.0 ['nc|ENSG00000131196|O95644-8|NFATC1', 'nc|ENSG00000131196|O95644-11|NFATC1', 'nc|ENSG00000131196|O95644-3|NFATC1', 'nc|ENSG00000131196|O95644-10|NFATC1', 'nc|ENSG00000131196|O95644-2|NFATC1', 'nc|ENSG00000131196|O95644-5|NFATC1', 'nc|ENSG00000131196|O95644-4|NFATC1', 'nc|ENSG00000131196|O95644-6|NFATC1', 'ENSG00000131196|ENST00000427363|NFATC1'] 30694 10942 GALQHLCG True H1975_Epitope_Rep1 797.38540801225 797.3848549679301 47.052 1 -1.9136046697898736 0.4428256409693805 1.0 ['ENST00000488290.5_1_10:30602540-30654262:-|nuORF', 'nc|ENSG00000107951|Q9NVV4-2|MTPAP'] 64664 732 LRKAALKQPF True PC9_epitope_Rep3 1170.7237125260997 1170.7220549037902 4.0602 3 -1.9138453434769922 0.4428281498546432 1.0 ['ENST00000222120.7_1_19:11435272-11435518:-|nuORF'] 16980 13811 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 59.799 2 -1.9138784932097863 0.4428281498546432 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 10178 15176 CCGFRDHKYC True NCI_RA007_Epitope_Rep5 1230.4732541238197 1230.47161490379 65.058 3 -1.913989523040012 0.4428281498546432 1.0 ['ENST00000401050.7_1_1:53099138-53105680:+|nuORF', 'nc|ENSG00000182183|Q6UWV7-2|SHISAL2A', 'ENST00000440303.5_1_1:53099138-53125209:+|nuORF', 'ENSG00000182183|ENST00000517870|SHISAL2A'] 120682 5129 VGAPLFMERE True NCI_RA007_Epitope_Rep5 1147.5695799534699 1147.56848993586 26.424 2 -1.9140342631055618 0.4428281498546432 1.0 ['ITGA8|p.R1043Dfs*7|2|0.14|ENSG00000077943|chr10:15517224-15517224|G/-|frameshift_variant', 'ENSG00000077943|ENST00000378076|ITGA8'] 45788 10233 ISNQECNIK True PC9_epitope_Rep2 1047.5018943164698 1047.5007899358602 44.697 2 -1.9142580235364204 0.44283426214401683 1.0 ['ENST00000492329.5_1_3:49721463-49723185:-|nuORF', 'nc|ENSG00000173531|P26927|MST1', 'ENSG00000173531|ENST00000449682|MST1', 'nc|ENSG00000186715|Q2TV78-2|MST1L', 'nc|ENSG00000186715|Q2TV78|MST1L'] 42900 22998 IFVFMFPL True H1975_Epitope_Rep3 1012.5455970517598 1012.54448993586 96.067 2 -1.914530953946406 0.44285745628469253 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 69604 2305 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 11.907 3 -1.9145316078854298 0.44285745628469253 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 20299 13034 EPCFWGVR True NCI_RA007_Epitope_Rep3 992.4538219252398 992.45272993586 58.542 2 -1.9145792759523432 0.4428635680514266 1.0 ['ENST00000482462.1_1_7:540672-552294:-|nuORF'] 13862 16404 DRCERGQVLK True H1975_Epitope_Rep1 1202.6189897573797 1202.6184749679298 68.459 1 -1.914632466002396 0.4428648215794035 1.0 ['ENST00000537496.5_1_12:109994935-109999279:-|nuORF', 'ENST00000541763.6_1_12:109994935-109999613:-|nuORF', 'ENST00000540016.5_1_12:109994935-110011292:-|nuORF'] 30660 13543 GALGRALSPL True PC9_epitope_Rep5 953.5658149023699 953.56470993586 57.115 2 -1.9147572812842952 0.4428648215794035 1.0 ['ENSG00000204394|ENST00000375663|VARS1'] 71960 21357 MPVPPKPR True NCI_RA007_Epitope_Rep3 920.5265929426799 920.52548993586 92.829 2 -1.9147794511116916 0.4428709330642154 1.0 ['ENSG00000103194|ENST00000219473|USP10', 'nc|ENSG00000103194|Q14694-2|USP10', 'ENST00000566378.1_1_16:84793488-84793554:+|nuORF', 'nc|ENSG00000103194|Q14694-3|USP10'] 14762 9618 DVYAVAQRY True PC9_epitope_Rep3 1083.53490869691 1083.53380993586 41.946 2 -1.9148211901659777 0.4428770444149491 1.0 ['ENSG00000214595|ENST00000356458|EML6', 'nc|ENSG00000214595|Q6ZMW3-2|EML6'] 24810 21512 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 89.824 2 -1.9152103526337791 0.4428869145552265 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 22164 19627 ETAKVCTDTVS True NCI_RA007_Epitope_Rep5 1152.5332540144 1152.53161490379 82.403 3 -1.915284872914114 0.4428869145552265 1.0 ['ENST00000590125.1_1_19:36032474-36033898:-|nuORF'] 127374 20129 VQPVIDKL True PC9_epitope_Rep3 910.5487678558999 910.54766993586 82.679 2 -1.9154235882605652 0.4428869145552265 1.0 ['ENST00000538548.5_1_12:132198725-132271134:+|nuORF', 'ENSG00000061936|ENST00000261674|SFSWAP', 'nc|ENSG00000061936|Q12872-2|SFSWAP'] 30031 5147 FYHPEETKLG True NCI_RA007_Epitope_Rep2 1219.5873381925899 1219.58624993586 24.64 2 -1.915465838317385 0.4428869145552265 1.0 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 92650 26164 RRFPKKWERPV True PC9_epitope_Rep1 1497.8680853440098 1497.8664449037901 105.96 3 -1.9155245897650264 0.4428869145552265 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 14167 5619 DSNFERSSTM True NCI_RA007_Epitope_Rep2 1172.4768017674398 1172.47570993586 26.471 2 -1.915530427268441 0.4428869145552265 1.0 ['Tigger1_dup9834|chr14:19106484-19106883:-|1.044883763241324|0.2064126540684672|2.34|491.0|3|1|sense', 'Tigger1_dup11946|chr22:15828868-15829349:-|1.0861641370613664|0.126984307270513|3.1|495.0|3|1|sense'] 43366 14179 IHLRKAGH True PC9_epitope_Rep6 930.55116789774 930.55006993586 66.418 2 -1.9155887022755762 0.4428869145552265 1.0 ['nc|ENSG00000182606|Q9UPV9-3|TRAK1'] 69600 1960 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 10.168 3 -1.9156660247909525 0.44289302519441487 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 590 23075 AARVARQTRN True PC9_epitope_Rep4 1141.64283643645 1141.6417299358602 96.98 2 -1.9156962894515333 0.4428942779112237 1.0 ['NGF|p.G65R|2|0.17|ENSG00000134259|chr1:115286603-115286603|C/G|missense_variant'] 105493 17070 SVDCGPSRAD True PC9_epitope_Rep4 1005.41855861533 1005.41746993586 73.658 2 -1.9157261991999994 0.4428942779112237 1.0 ['ENSG00000178974|ENST00000313833|FBXO34'] 58007 11432 LERDLLDAEPM True NCI_RA007_Epitope_Rep1 1300.6333024088399 1300.6322099358601 48.433 2 -1.9157777396967959 0.44290038826858535 1.0 ['nc|ENSG00000196335|Q9BXU1-3|STK31', 'nc|ENSG00000196335|Q9BXU1-2|STK31', 'ENSG00000196335|ENST00000355870|STK31'] 81095 14849 PPGGGLRF True PC9_epitope_Rep4 799.43407245683 799.43296993586 65.056 2 -1.9165179700951238 0.44295037016726074 1.0 ['nc|ENSG00000185513|Q9Y468|L3MBTL1', 'ENSG00000185513|ENST00000418998|L3MBTL1'] 34021 15548 GNKVTGTI True NCI_RA007_Epitope_Rep5 788.43921740692 788.43812993586 66.505 2 -1.9165350689020453 0.4429564797753795 1.0 ['ENSG00000081026|ENST00000307546|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-1|MAGI3'] 5635 12570 APAFHPAP True NCI_RA007_Epitope_Rep2 806.4075233558199 806.4069749679301 53.51 1 -1.9167900581433746 0.44298452460598614 1.0 ['ENST00000370005.3_1_10:103986155-103986290:+|nuORF'] 126748 24114 VPSEHALL True NCI_RA007_Epitope_Rep1 864.4705175352 864.46942993586 99.884 2 -1.9170747932028391 0.44298827632343746 1.0 ['ENST00000278412.6_1_11:57093684-57093861:-|nuORF'] 135389 19009 YDLYAVINHY True PC9_epitope_Rep5 1269.60298825673 1269.60188993586 78.144 2 -1.9171785348265946 0.44298827632343746 1.0 ['nc|ENSG00000172046|O94966|USP19', 'nc|ENSG00000172046|O94966-5|USP19', 'nc|ENSG00000172046|O94966-4|USP19', 'nc|ENSG00000172046|O94966-3|USP19', 'nc|ENSG00000172046|O94966-7|USP19', 'ENSG00000172046|ENST00000417901|USP19', 'ENST00000483667.1_1_3:49147547-49148163:-|nuORF'] 70661 22864 MCSSKNPIMSQ True H1975_Epitope_Rep2 1224.5301002935998 1224.52846490379 94.393 3 -1.9174985948011216 0.44298827632343746 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C', 'MYO1C-SMG6|3|fusion', 'MYO1C-SMG6|2|fusion', 'MYO1C-SMG6|1|fusion'] 138257 10564 YQVAFRMAYFP True PC9_epitope_Rep3 1391.6696283479096 1391.66852993586 45.581 2 -1.917641563862521 0.44298827632343746 1.0 ['ENSG00000140323|ENST00000267889|DISP2', 'DISP2|p.F542Sfs*10|1|0.34|ENSG00000140323|chr15:40367732-40367732|C/-|frameshift_variant'] 83456 14618 QDEFVSSQLK True H1975_Epitope_Rep1 1179.57716743171 1179.57657496793 61.438 1 -1.917678690867538 0.44298827632343746 1.0 ['PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1'] 19998 21110 EMHAYTVQRLY True H1975_Epitope_Rep2 1409.6761702803299 1409.6750699358602 87.377 2 -1.9176840421480772 0.44298827632343746 1.0 ['nc|ENSG00000166747|O43747-2|AP1G1', 'ENSG00000166747|ENST00000299980|AP1G1', 'ENST00000565642.5_1_16:71777395-71799448:-|nuORF'] 403 22960 AALIVNNAVDY True H1975_Epitope_Rep3 1161.60298825673 1161.60188993586 95.921 2 -1.9177346587338204 0.44299077719411756 1.0 ['nc|ENSG00000137261|Q5VV43-3|KIAA0319', 'nc|ENSG00000137261|Q5VV43-2|KIAA0319', 'ENSG00000137261|ENST00000378214|KIAA0319', 'nc|ENSG00000137261|Q5VV43-4|KIAA0319'] 94584 25219 RYIYPKLKMAL True PC9_epitope_Rep2 1394.8108132783398 1394.8097099358602 102.67 2 -1.9178327841056746 0.44299077719411756 1.0 ['ENST00000487532.5_1_1:45424435-45452248:-|nuORF'] 37463 14295 GYADPLRH True PC9_epitope_Rep1 927.4562644533901 927.45571496793 59.81 1 -1.9178398129423342 0.44299077719411756 1.0 ['ENSG00000108511|ENST00000225648|HOXB6', 'nc|ENSG00000108511|P17509-2|HOXB6'] 69597 1744 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 9.0572 3 -1.9179423761306096 0.44299077719411756 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 92603 18735 RREEKAMI True NCI_RA007_Epitope_Rep5 1031.5545985956699 1031.5535099358601 78.887 2 -1.9180217881368882 0.4429968855551169 1.0 ['ENST00000491144.5_1_3:183855641-183858240:+|nuORF', 'ENST00000468748.5_1_3:183855785-183858017:+|nuORF'] 64805 15484 LRWMDISQF True NCI_RA007_Epitope_Rep5 1194.5855643707798 1194.58390490379 66.255 3 -1.9188809846793893 0.44302492625206985 1.0 ['RYR1|p.E2972del|1|0.28|ENSG00000196218|chr19:38507807-38507809|AGG/-|inframe_deletion'] 100312 10916 SLMAYAAR True PC9_epitope_Rep1 881.4429228883699 881.44182993586 46.874 2 -1.9189417537233413 0.44303103410461675 1.0 ['ENSG00000160703|ENST00000409109|NLRX1', 'ENST00000481860.6_1_11:119043673-119051967:+|nuORF', 'NLRX1|p.A889Cfs*3|1|0.11|ENSG00000160703|chr11:119183168-119183169|-/G|frameshift_variant', 'nc|ENSG00000160703|Q86UT6-2|NLRX1'] 56913 7412 LEDQVQQDAI True NCI_RA007_Epitope_Rep2 1157.55643198713 1157.55532993586 33.456 2 -1.9190444723145734 0.44303714182320625 1.0 ['ENSG00000198707|ENST00000552810|CEP290'] 92975 20579 RRQKQLLNQR True NCI_RA007_Epitope_Rep1 1338.7956486797398 1338.79454993586 84.271 2 -1.9191821140509697 0.4430396403311585 1.0 ['ENSG00000138100|ENST00000380075|TRIM54', 'nc|ENSG00000138100|Q9BYV2-2|TRIM54'] 135980 23075 YFEGIHLD True PC9_epitope_Rep6 992.46034677432 992.45924993586 101.86 2 -1.9192891590206065 0.4430396403311585 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ATAD5|p.P1832L|1|0.17|ENSG00000176208|chr17:30894873-30894873|C/T|missense_variant'] 18444 23577 EKHIKRSKH True H1975_Epitope_Rep3 1161.6730739355698 1161.67141490379 98.364 3 -1.9193058507462628 0.4430396403311585 1.0 ['ENSG00000215421|ENST00000299687|ZNF407', 'nc|ENSG00000215421|Q9C0G0-3|ZNF407', 'nc|ENSG00000215421|Q9C0G0-2|ZNF407'] 32300 14266 GFVFSCNQ True NCI_RA007_Epitope_Rep5 900.37998827864 900.37888993586 61.568 2 -1.91933850969909 0.4430396403311585 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 37805 24652 HDALYVVG True H1975_Epitope_Rep1 872.43921740692 872.43812993586 102.14 2 -1.919463554130756 0.4430567130137287 1.0 ['ENSG00000066084|ENST00000301180|DIP2B', 'ENSG00000151240|ENST00000280886|DIP2C', 'ENSG00000160305|ENST00000417564|DIP2A', 'nc|ENSG00000160305|Q14689-6|DIP2A', 'ENST00000478105.5_1_21:47981571-47987532:+|nuORF'] 93405 14178 RRWWWLQRRQ True H1975_Epitope_Rep1 1569.8541666153699 1569.85306993586 59.711 2 -1.919572197066643 0.44305796179740786 1.0 ['ENST00000591247.5_1_17:42113394-42113565:-|nuORF'] 55101 5764 LALPPGKM True PC9_epitope_Rep1 825.47824576793 825.47714993586 26.988 2 -1.9196443291402006 0.44305796179740786 1.0 ['ENST00000245414.8_1_5:131819408-131819492:-|nuORF'] 55128 21464 LALYKKGE True NCI_RA007_Epitope_Rep5 920.5331177917599 920.53202993586 89.629 2 -1.919914397907673 0.4430604592004561 1.0 ['nc|ENSG00000147255|Q8N6C5-2|IGSF1', 'ENSG00000147255|ENST00000361420|IGSF1', 'nc|ENSG00000147255|Q8N6C5-4|IGSF1'] 131578 23799 VVVTVQYRL True PC9_epitope_Rep1 1075.6389798426299 1075.6378899358601 96.341 2 -1.9199217769517938 0.4430604592004561 1.0 ['CES3|p.S424Efs*27|1|0.12|ENSG00000172828|chr16:66971296-66971314|TCAGTTTTTCAAGATACCT/-|frameshift_variant', 'ENSG00000172828|ENST00000303334|CES3'] 3852 24836 AHAKKACG True H1975_Epitope_Rep2 784.4013924295599 784.40028993586 102.1 2 -1.9200095829666834 0.4430604592004561 1.0 ['CBX2|p.E220K|1|0.15|ENSG00000173894|chr17:79784101-79784101|G/A|missense_variant'] 85191 26517 QKENLRKFY True H1975_Epitope_Rep2 1224.6615061923599 1224.6604099358601 109.17 2 -1.9200286962127076 0.4430604592004561 1.0 ['ENSG00000136942|ENST00000348462|RPL35', 'ENST00000487431.1_1_9:127620199-127623861:-|nuORF', 'ENST00000450819.1_1_1:237144684-237145005:+|nuORF'] 33609 25479 GLLPEPRRK True PC9_epitope_Rep1 1064.6454622054 1064.64487496793 102.99 1 -1.9202094674676482 0.4430665657927919 1.0 ['ENST00000532257.1_3_2:17935566-17941189:+|nuORF', 'ENST00000524465.5_3_2:17935566-17941221:+|nuORF'] 139036 13682 YSISPSFTK True H1975_Epitope_Rep3 1028.51786165044 1028.51727496793 57.921 1 -1.9203882805330985 0.44307877857573597 1.0 ['ENSG00000173769|ENST00000309765|TOPAZ1'] 134435 27064 WTHGAQGG True H1975_Epitope_Rep2 812.3565504121198 812.35544993586 111.71 2 -1.9204037849061872 0.44307877857573597 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 62578 8911 LLVAELTA True NCI_RA007_Epitope_Rep1 828.49566965388 828.49456993586 38.662 2 -1.9207186004757664 0.443101954893813 1.0 ['ENST00000370620.5_1_X:135749294-135749660:-|nuORF'] 78103 10575 PAPAKPKEE True PC9_epitope_Rep4 965.5181960036099 965.51708993586 48.416 2 -1.920747735260413 0.443101954893813 1.0 ['ENSG00000168530|ENST00000352451|MYL1'] 130768 18852 VVDTVLAL True NCI_RA007_Epitope_Rep4 828.4956696538799 828.49456993586 81.538 2 -1.9207638761506431 0.44310806069643016 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 101608 24456 SPFCSCLL True H1975_Epitope_Rep2 868.38229677776 868.38118993586 100.61 2 -1.9208089354349849 0.4431141663651613 1.0 ['ENST00000334801.7_1_11:118768619-118768991:-|nuORF'] 22461 14555 ETHALVLAFG True NCI_RA007_Epitope_Rep1 1056.56039516876 1056.55928993586 60.663 2 -1.9209513324252983 0.44315440950752094 1.0 ['ENST00000371568.7_1_1:52870036-52870117:-|nuORF'] 99773 20969 SLGPGSVM True PC9_epitope_Rep4 746.36327558534 746.36272496793 88.819 1 -1.921126111784392 0.44315440950752094 1.0 ['ENSG00000112812|ENST00000230582|PRSS16'] 11448 7797 DFTALSGV True H1975_Epitope_Rep3 808.3966838886 808.39558993586 34.974 2 -1.9212251548243087 0.44315440950752094 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S3673Afs*24|1|0.28|ENSG00000117983|chr11:1247893-1247893|C/-|frameshift_variant', 'ENST00000525715.5_1_11:1244314-1260349:+|nuORF'] 69586 355 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 1.872 3 -1.9213463553224408 0.4431605144003596 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 57630 18229 LELRSFPI True PC9_epitope_Rep2 973.55966689277 973.55856993586 75.436 2 -1.921505084432761 0.4431666191593396 1.0 ['LRRK2|p.N1286I|1|0.29|ENSG00000188906|chr12:40305864-40305864|A/T|missense_variant'] 61056 9148 LLATQPLV True NCI_RA007_Epitope_Rep2 853.5273041353299 853.52620993586 40.191 2 -1.9216392089864183 0.44317272378446526 1.0 ['ENSG00000181656|ENST00000315033|GPR88'] 38451 22013 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 90.997 2 -1.921713801418421 0.4431788282757411 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 93740 19900 RTRLRNRRY True NCI_RA007_Epitope_Rep1 1289.7541182209297 1289.75302993586 81.612 2 -1.9217285380627036 0.44318493263317144 1.0 ['CCDC97|p.E232Sfs*48|1|0.27|ENSG00000142039|chr19:41319763-41319763|G/-|frameshift_variant', 'ENSG00000142039|ENST00000269967|CCDC97'] 102081 21397 SPPTGDSGKVD True PC9_epitope_Rep1 1058.48801807414 1058.48747496793 87.137 1 -1.9217968055020085 0.4431861783181136 1.0 ['nc|ENSG00000141750|Q6ZMT1-2|STAC2', 'ENSG00000141750|ENST00000333461|STAC2'] 72169 24790 MRLVLHSMTPA True H1975_Epitope_Rep2 1254.6576837652199 1254.65602490379 101.92 3 -1.9219141150733792 0.4431861783181136 1.0 ['ENST00000454784.8_2_12:40959567-40961472:+|nuORF'] 137283 26064 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 106.17 1 -1.9219460215544164 0.4431874239484329 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 31240 12301 GDLWLLVPP True H1975_Epitope_Rep1 1008.5644179200399 1008.56332993586 52.343 2 -1.9219678096950816 0.4431874239484329 1.0 ['ENST00000339142.6_2_17:77020254-77040169:+|nuORF'] 112451 23451 TNPTAKRQFVQ True PC9_epitope_Rep1 1288.68878356936 1288.6876899358601 94.988 2 -1.9225274161110848 0.44320087695258975 1.0 ['ENSG00000137076|ENST00000314888|TLN1', 'nc|ENSG00000137076|Q9Y490-2|TLN1'] 85252 22876 QKLNYMLLAK True PC9_epitope_Rep4 1220.6951148197597 1220.69400993586 96.21 2 -1.9226489818102817 0.44320087695258975 1.0 ['AIM2|p.F268Lfs*2|1|0.15|ENSG00000163568|chr1:159065922-159065922|A/-|frameshift_variant', 'ENSG00000163568|ENST00000368130|AIM2'] 110557 10304 TIRVWELDLP True H1975_Epitope_Rep1 1240.6815729306 1240.6804699358602 44.579 2 -1.9227623490976105 0.44320087695258975 1.0 ['nc|ENSG00000166596|Q8N1V2-3|CFAP52', 'ENSG00000166596|ENST00000352665|CFAP52', 'nc|ENSG00000166596|Q8N1V2-2|CFAP52', 'ENST00000576630.5_1_17:9487588-9546512:+|nuORF'] 20481 20844 EPSTIPPCRR True PC9_epitope_Rep4 1154.5866269999399 1154.58607496793 88.329 1 -1.9227691889029206 0.44320087695258975 1.0 ['ENST00000537165.5_1_12:109907385-109907427:-|nuORF'] 133875 12963 WMPRKPMPI True PC9_epitope_Rep5 1154.60927702082 1154.6081699358601 54.871 2 -1.9229315059098573 0.4432069804660952 1.0 ['PCDH19|p.N975K|1|0.26|ENSG00000165194|chrX:100296799-100296799|G/T|missense_variant'] 13516 22050 DPGLRGPLHW True NCI_RA007_Epitope_Rep3 1146.5934266325398 1146.59179490379 95.805 3 -1.9230054302590671 0.4432082255447889 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 81534 12625 PQVVRVGG True NCI_RA007_Epitope_Rep3 810.4711862415398 810.47008993586 56.904 2 -1.9231234303021927 0.4432082255447889 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.R2720Qfs*63|1|0.51|ENSG00000168477|chr6:32061470-32061471|GC/-|frameshift_variant', 'TNXB|p.P3212Lfs*4|1|0.45|ENSG00000168477|chr6:32052891-32052891|G/-|frameshift_variant', 'TNXB|p.T3316Qfs*58|1|0.15|ENSG00000168477|chr6:32050233-32050233|C/-|frameshift_variant', 'TNXB|p.G3470Afs*51|1|0.22|ENSG00000168477|chr6:32049359-32049359|C/-|frameshift_variant'] 83795 24099 QEELPMYSLLS True NCI_RA007_Epitope_Rep5 1308.62715439924 1308.6255149037902 100.1 3 -1.9233842773154368 0.4432362516305122 1.0 ['UEVLD|p.S145L|1|0.09|ENSG00000151116|chr11:18566406-18566406|G/A|missense_variant'] 136489 13442 YHILKPWWDVF True NCI_RA007_Epitope_Rep1 1502.77105664134 1502.76994993586 56.29 2 -1.9236894843820376 0.44327648193616276 1.0 ['ENSG00000197147|ENST00000330947|LRRC8B'] 49343 7419 KIDPHPSPP True H1975_Epitope_Rep3 986.51853035678 986.51742993586 33.515 2 -1.9237043139862546 0.44327648193616276 1.0 ['ENST00000414876.5_1_2:231850605-231851715:-|nuORF'] 23147 8167 EVNIGNSQTR True NCI_RA007_Epitope_Rep5 1116.5523496662001 1116.5512499358601 38.097 2 -1.923724527685612 0.44327648193616276 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 19402 9414 ELPFDRVV True PC9_epitope_Rep3 973.5232813840499 973.52218993586 41.147 2 -1.9238170297660857 0.4432935450988129 1.0 ['nc|ENSG00000073150|Q96RD6-1|PANX2', 'ENSG00000073150|ENST00000395842|PANX2'] 122614 11988 VGTLGDAVP True PC9_epitope_Rep1 827.4388830537499 827.43833496793 50.975 1 -1.9242744710309296 0.44335083354340893 1.0 ['ENSG00000092096|ENST00000354772|SLC22A17', 'nc|ENSG00000092096|Q8WUG5|SLC22A17', 'nc|ENSG00000092096|Q8WUG5-3|SLC22A17', 'ENST00000557699.5_1_14:23818379-23821759:-|nuORF'] 49352 21614 KIFRKGRPY True PC9_epitope_Rep6 1163.6927467509897 1163.69110490379 96.016 3 -1.9243662369642125 0.44335083354340893 1.0 ['ENSG00000155660|ENST00000652332|PDIA4'] 78454 23442 PCRKSYCL True NCI_RA007_Epitope_Rep3 968.4571930535199 968.45608993586 101.75 2 -1.924420729499056 0.44335083354340893 1.0 ['TIAM1|p.H295Y|1|0.62|ENSG00000156299|chr21:31266090-31266090|G/A|missense_variant'] 95915 10390 SDVERLER True NCI_RA007_Epitope_Rep1 1002.5094222250599 1002.50832993586 44.397 2 -1.9244361148875524 0.44335083354340893 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000494465.5_1_2:242611409-242611676:+|nuORF', 'ENST00000475693.1_1_2:242607884-242611676:+|nuORF'] 103032 24520 SQKPSVLLTLR True PC9_epitope_Rep4 1240.7503211967598 1240.74922993586 102.8 2 -1.9245836451719283 0.4433569346105789 1.0 ['nc|ENSG00000124299|P12955-3|PEPD', 'ENST00000570572.1_1_17:53638398-53638659:-|nuORF', 'ENST00000590408.1_1_19:33953899-34001945:-|nuORF', 'nc|ENSG00000124299|P12955-2|PEPD', 'ENSG00000124299|ENST00000244137|PEPD'] 64486 18253 LQVMINLL True NCI_RA007_Epitope_Rep5 942.55722436462 942.55612993586 77.019 2 -1.9246088076872456 0.4433630355440108 1.0 ['nc|ENSG00000084112|Q8WYL5-5|SSH1', 'nc|ENSG00000084112|Q8WYL5-2|SSH1', 'SSH1|p.L507Pfs*17|1|0.15|ENSG00000084112|chr12:108792659-108792660|-/G|frameshift_variant', 'ENSG00000084112|ENST00000326495|SSH1'] 79919 24971 PIPHLVLT True H1975_Epitope_Rep3 888.54328855264 888.54218993586 103.87 2 -1.924845742567386 0.4433691363437089 1.0 ['ENST00000354124.7_2_17:77045413-77045737:+|nuORF'] 106415 19907 SVTITSRYD True PC9_epitope_Rep3 1040.51383889916 1040.51274993586 81.814 2 -1.9248633401100654 0.44336924240265646 1.0 ['ENSG00000137992|ENST00000370132|DBT'] 117829 11637 VAPAEPPP True H1975_Epitope_Rep1 776.4068546494799 776.40630496793 49.752 1 -1.9248696865860344 0.44336924240265646 1.0 ['ENST00000405486.5_2_22:41681548-41681698:-|nuORF', 'ENST00000422838.1_2_22:41681494-41681698:-|nuORF'] 92671 24907 RRGLHRLPNG True NCI_RA007_Epitope_Rep5 1174.6795562983398 1174.67844993586 103.3 2 -1.9250623890506886 0.44336924240265646 1.0 ['SPAG9|p.M1269Ifs*14|1|0.25|ENSG00000008294|chr17:50970743-50970750|TGACAAGC/-|frameshift_variant'] 137285 26412 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 107.91 1 -1.9251953418672478 0.44336924240265646 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 8536 18269 ATWTLLREV True PC9_epitope_Rep4 1087.6025943339098 1087.6014899358602 78.343 2 -1.9252705566971138 0.44336924240265646 1.0 ['ENST00000395831.7_1_7:44113452-44119198:-|nuORF'] 121417 10624 VGIAYLGGV True H1975_Epitope_Rep3 847.4803539429099 847.47924993586 45.936 2 -1.9252775754629063 0.44336924240265646 1.0 ['ENST00000378898.8_1_15:100603866-100879329:-|nuORF', 'ENSG00000140470|ENST00000268070|ADAMTS17', 'ENST00000559976.1_1_15:100708871-100801709:-|nuORF', 'nc|ENSG00000140470|Q8TE56-2|ADAMTS17'] 110664 24365 TIWEIKLL True H1975_Epitope_Rep3 1014.6113681124599 1014.61026993586 101.45 2 -1.9252865586277028 0.44336924240265646 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF'] 65130 11643 LSDPSWRLI True PC9_epitope_Rep2 1085.58694426977 1085.58584993586 50.11 2 -1.9253155188662128 0.44336924240265646 1.0 ['ENST00000393085.3_1_7:135613585-135613720:-|nuORF'] 16578 6302 EERCQELFD True PC9_epitope_Rep4 1167.48663817515 1167.48554993586 31.302 2 -1.9253778868895368 0.44336924240265646 1.0 ['nc|ENSG00000125257|O15439-2|ABCC4', 'ABCC4|p.L1261Ffs*59|1|0.26|ENSG00000125257|chr13:95034692-95034693|-/AA|frameshift_variant', 'ENSG00000125257|ENST00000645237|ABCC4'] 96792 23042 SERKKEKKKP True PC9_epitope_Rep1 1256.7564692063597 1256.75536993586 93.431 2 -1.9255485677253141 0.4433814423951518 1.0 ['ENSG00000176771|ENST00000409261|NCKAP5'] 134232 20680 WRRLSNAVDC True NCI_RA007_Epitope_Rep5 1218.59277500954 1218.5911349037901 86.503 3 -1.9255913427351836 0.4433814423951518 1.0 ['ENST00000486209.5_1_22:21827366-21827621:-|nuORF'] 82683 20378 PVNRRRVEAAR True NCI_RA007_Epitope_Rep3 1322.76434855146 1322.7632499358601 88.791 2 -1.9258177400958767 0.4433826833090419 1.0 ['DRD2|p.M346Cfs*13|1|0.11|ENSG00000149295|chr11:113412659-113412659|G/-|frameshift_variant', 'ENSG00000149295|ENST00000362072|DRD2'] 105525 9253 SVDPGEPP True NCI_RA007_Epitope_Rep1 796.36029837988 796.35920993586 39.989 2 -1.9259201343996406 0.4433826833090419 1.0 ['nc|ENSG00000136883|Q96FN5|KIF12', 'ENSG00000136883|ENST00000640217|KIF12'] 17013 9678 EGLLSVAL True H1975_Epitope_Rep3 800.4643695256 800.46326993586 42.245 2 -1.926115807933559 0.4434106998049401 1.0 ['ENSG00000127903|ENST00000537055|ZNF835'] 103211 22963 SQRIQRPGR True PC9_epitope_Rep1 1096.62137271588 1096.62026993586 93.127 2 -1.9262041300373716 0.4434167990795025 1.0 ['ENST00000534320.5_1_11:587364-591403:+|nuORF'] 137260 24914 YLGKAKPL True NCI_RA007_Epitope_Rep1 888.5432885526399 888.54274496793 103.11 1 -1.9262564978232035 0.44342413815775056 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 13518 20134 DPGLRGPLHW True NCI_RA007_Epitope_Rep4 1146.5934266325398 1146.59179490379 87.111 3 -1.9262907079184766 0.44342413815775056 1.0 ['ENST00000264705.8_1_2:27447237-27447342:+|nuORF'] 94088 17919 RVWFREPPA True NCI_RA007_Epitope_Rep3 1156.61416207712 1156.61306993586 78.52 2 -1.9263107923821337 0.44342413815775056 1.0 ['ENSG00000184601|ENST00000557649|C14orf180'] 53557 24085 KVRHLRHP True H1975_Epitope_Rep2 1041.63081520077 1041.62970993586 99.176 2 -1.9264322139284595 0.44343529514877955 1.0 ['ENSG00000239810|ENST00000619922|PRAMEF11'] 131537 25448 VVVGVGLIVG True PC9_epitope_Rep5 910.5851533646199 910.5846049679301 103.12 1 -1.926463782113692 0.44343529514877955 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 137289 26556 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 108.62 1 -1.9265212139489205 0.44343529514877955 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 137287 26556 YLGKAKPL True PC9_epitope_Rep3 888.5432885526399 888.54274496793 108.62 1 -1.9265212139489205 0.44343529514877955 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 110583 24520 TISLRKLKER True H1975_Epitope_Rep3 1242.77720465094 1242.77554490379 102.05 3 -1.9265940018978345 0.44343529514877955 1.0 ['ENST00000359314.5_1_6:47471138-47501404:+|nuORF'] 139022 22646 YSHHHHQMV True PC9_epitope_Rep1 1174.5090453855803 1174.50794993586 91.915 2 -1.9267356694819295 0.44343529514877955 1.0 ['ENST00000590891.1_1_16:4660442-4660589:-|nuORF'] 95608 5430 SATLRDAVP True NCI_RA007_Epitope_Rep3 928.4977949121999 928.49668993586 28.371 2 -1.9267398116909735 0.44343529514877955 1.0 ['ENSG00000172922|ENST00000308418|RNASEH2C', 'ENST00000528220.1_1_11:65487749-65488268:-|nuORF'] 120114 17641 VFIGEKRML True PC9_epitope_Rep2 1091.61613622307 1091.61502993586 73.136 2 -1.9267896429804912 0.44343529514877955 1.0 ['ENST00000336095.10_1_20:3913450-3913603:-|nuORF'] 19757 12162 ELSTKWFK True H1975_Epitope_Rep2 1037.5545815123298 1037.5534899358602 51.866 2 -1.9267949763440355 0.44343529514877955 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant'] 62047 23126 LLLWKKIHRM True PC9_epitope_Rep6 1336.81656736512 1336.8154699358602 102.05 2 -1.9268307516190346 0.44343529514877955 1.0 ['ENSG00000120440|ENST00000239587|TTLL2'] 90611 25680 RKKKGRGPF True NCI_RA007_Epitope_Rep2 1072.6617809758798 1072.66068993586 108.65 2 -1.9268417174711043 0.44343529514877955 1.0 ['ENSG00000162231|ENST00000294172|NXF1', 'ENST00000527064.1_1_11:62571265-62572828:-|nuORF', 'nc|ENSG00000162231|Q9UBU9-2|NXF1'] 121140 19057 VGGGHGGP True PC9_epitope_Rep6 636.29797290684 636.29742496793 85.946 1 -1.926991808933271 0.44343529514877955 1.0 ['ENST00000306917.4_1_15:68570649-68570838:+|nuORF'] 60730 25762 LKAKKPQKRKP True PC9_epitope_Rep4 1320.8717737421198 1320.8701349037901 108.56 3 -1.927079764914888 0.44343529514877955 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 12772 6467 DLHPNTDPFK True H1975_Epitope_Rep2 1182.5669371011797 1182.5658499358601 29.792 2 -1.927107782269369 0.44343529514877955 1.0 ['nc|ENSG00000140945|P55290-5|CDH13', 'ENSG00000140945|ENST00000567109|CDH13', 'nc|ENSG00000140945|P55290-4|CDH13'] 63893 24964 LPVPKKSP True PC9_epitope_Rep3 864.54328855264 864.54218993586 101.37 2 -1.9271079230439314 0.44343529514877955 1.0 ['nc|ENSG00000151276|Q96QZ7-7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-6|MAGI1', 'ENSG00000151276|ENST00000402939|MAGI1', 'nc|ENSG00000151276|Q96QZ7|MAGI1', 'nc|ENSG00000151276|Q96QZ7-4|MAGI1', 'nc|ENSG00000151276|Q96QZ7-3|MAGI1', 'nc|ENSG00000151276|Q96QZ7-5|MAGI1'] 125506 20380 VLVPRSRREP True NCI_RA007_Epitope_Rep4 1207.7149387475497 1207.71384993586 88.242 2 -1.9271102121967023 0.44343529514877955 1.0 ['ENST00000436163.2_X:117250469-117250592:-|nuORF'] 131387 7701 VVSRTGHSL True PC9_epitope_Rep5 954.5246783663799 954.52358993586 34.565 2 -1.9271579347947496 0.44343529514877955 1.0 ['HEATR5B|p.A2057Cfs*9|1|0.36|ENSG00000008869|chr2:36981537-36981538|-/A|frameshift_variant', 'ENSG00000008869|ENST00000233099|HEATR5B', 'nc|ENSG00000008869|Q9P2D3-3|HEATR5B', 'ENST00000467978.1_1_2:37268272-37283611:-|nuORF'] 64315 24511 LQMLLAKH True H1975_Epitope_Rep1 952.55280769052 952.55170993586 101.58 2 -1.9271954037281103 0.44343529514877955 1.0 ['nc|ENSG00000144445|A0AUZ9-4|KANSL1L', 'KANSL1L|p.W684Cfs*14|1|0.16|ENSG00000144445|chr2:210031524-210031525|-/CA|frameshift_variant', 'nc|ENSG00000144445|A0AUZ9-3|KANSL1L', 'nc|ENSG00000144445|A0AUZ9-2|KANSL1L', 'ENSG00000144445|ENST00000281772|KANSL1L', 'ENST00000453904.2_1_2:211018217-211034955:-|nuORF'] 63869 10779 LPVDGRPLP True NCI_RA007_Epitope_Rep4 962.5549158654999 962.55380993586 48.309 2 -1.9272259108957077 0.4434366339128244 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 121563 21748 VGKRNARA True PC9_epitope_Rep2 870.5147823890198 870.5142349679301 89.124 1 -1.92732723641754 0.4434366339128244 1.0 ['ENST00000405731.7_1_7:6618146-6618326:+|nuORF', 'ENST00000396707.6_1_7:6617123-6618326:+|nuORF'] 80730 5819 PLRKDDASWL True H1975_Epitope_Rep3 1199.6298717109098 1199.6287699358602 27.405 2 -1.9273649557324555 0.4434366339128244 1.0 ['ENSG00000015532|ENST00000017003|XYLT2'] 106778 7752 SYFSNAPV True PC9_epitope_Rep5 883.4075829254699 883.40648993586 34.759 2 -1.927367561516332 0.4434366339128244 1.0 ['ENSG00000134815|ENST00000328771|DHX34', 'DHX34|p.D539Tfs*42|1|0.13|ENSG00000134815|chr19:47366998-47366998|G/-|frameshift_variant', 'DHX34|p.H830Tfs*43|1|0.28|ENSG00000134815|chr19:47376448-47376448|C/-|frameshift_variant', 'DHX34|p.S320C|1|0.28|ENSG00000134815|chr19:47355292-47355292|C/G|missense_variant'] 95953 4065 SDYSFSVIAMS True PC9_epitope_Rep6 1205.52744035797 1205.52634993586 22.489 2 -1.9274516696792467 0.4434366339128244 1.0 ['ABCA12|p.Y1239Tfs*18|1|0.27|ENSG00000144452|chr2:214989443-214989443|A/-|frameshift_variant', 'ENSG00000144452|ENST00000272895|ABCA12', 'nc|ENSG00000144452|Q86UK0-2|ABCA12'] 110663 24474 TIWEIKLL True H1975_Epitope_Rep1 1014.6113681124599 1014.61026993586 101.44 2 -1.9274586023128313 0.4434366339128244 1.0 ['nc|ENSG00000004866|Q9NRC1-4|ST7', 'ENSG00000004866|ENST00000323984|ST7', 'nc|ENSG00000004866|Q9NRC1|ST7', 'ENST00000487459.5_1_7:116660544-116830896:+|nuORF'] 59755 6724 LGWLQEHAC True PC9_epitope_Rep3 1055.48585032951 1055.48474993586 30.885 2 -1.9275365567559521 0.4434366339128244 1.0 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'ENST00000508667.5_1_5:145522961-145531505:-|nuORF'] 85251 23597 QKLNYMLLAK True PC9_epitope_Rep2 1220.6951148197597 1220.69400993586 96.235 2 -1.9275715873913881 0.4434366339128244 1.0 ['AIM2|p.F268Lfs*2|1|0.15|ENSG00000163568|chr1:159065922-159065922|A/-|frameshift_variant', 'ENSG00000163568|ENST00000368130|AIM2'] 2928 21580 AFFFLLVVRL True PC9_epitope_Rep6 1223.7430509883498 1223.74141490379 95.883 3 -1.9277117039585445 0.4434366339128244 1.0 ['ST6GALNAC3|p.L20F|1|0.31|ENSG00000184005|chr1:76313844-76313844|C/T|missense_variant'] 73353 18611 NENYDYLKG True PC9_epitope_Rep2 1114.49310345458 1114.4925749679298 76.945 1 -1.9277548750294087 0.4434366339128244 1.0 ['ENSG00000110713|ENST00000324932|NUP98', 'nc|ENSG00000110713|P52948|NUP98', 'nc|ENSG00000110713|P52948-6|NUP98', 'nc|ENSG00000110713|P52948-2|NUP98', 'ENST00000469881.1_1_11:3697391-3700990:-|nuORF'] 76392 17115 NSLEYPATMT True NCI_RA007_Epitope_Rep3 1125.50122561013 1125.5006749679299 75.192 1 -1.9277663964100205 0.4434366339128244 1.0 ['NEURL4|p.A1044Gfs*3|1|0.11|ENSG00000215041|chr17:7321428-7321429|-/C|frameshift_variant', 'nc|ENSG00000215041|Q96JN8-2|NEURL4', 'ENSG00000215041|ENST00000399464|NEURL4'] 116344 6335 TVYDRGICPM True NCI_RA007_Epitope_Rep3 1153.52600088933 1153.52490993586 31.923 2 -1.9283217612902719 0.4434561626429479 1.0 ['nc|ENSG00000078246|O75386-2|TULP3', 'ENSG00000078246|ENST00000448120|TULP3', 'TULP3-GGNBP2|1|fusion'] 10995 18411 DDEEEYDQE True NCI_RA007_Epitope_Rep1 1170.3836721449 1170.38203490379 75.75 3 -1.9284051838582243 0.4434561626429479 1.0 ['ENSG00000197651|ENST00000358859|CCER1'] 137267 26004 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 105.22 1 -1.9284077643757964 0.4434561626429479 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 34342 22441 GPSHYGPY True H1975_Epitope_Rep2 876.3766171503598 876.37552993586 92.736 2 -1.928448765743473 0.4434561626429479 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1'] 16875 6012 EFVSLVTG True H1975_Epitope_Rep3 850.4436340810199 850.44252993586 28.138 2 -1.9284989431693662 0.4434561626429479 1.0 ['ENSG00000010292|ENST00000315579|NCAPD2'] 114588 9243 TSLFIRNVA True PC9_epitope_Rep5 1019.57637958607 1019.57528993586 40.5 2 -1.9286428108085034 0.4434622588807466 1.0 ['ENSG00000154548|ENST00000452027|SRSF12'] 52545 24419 KPRQKMGKETF True H1975_Epitope_Rep3 1348.7285402063596 1348.72744993586 101.66 2 -1.9287164654477054 0.4434854044580755 1.0 ['nc|ENSG00000173406|O75553-3|DAB1', 'nc|ENSG00000173406|O75553-4|DAB1', 'nc|ENSG00000173406|O75553-5|DAB1', 'ENSG00000173406|ENST00000371236|DAB1', 'nc|ENSG00000173406|O75553|DAB1'] 74775 20767 NLMDFVKKTG True PC9_epitope_Rep5 1151.60088008175 1151.6003749679298 84.931 1 -1.928801681601049 0.4434854044580755 1.0 ['ENST00000599239.5_1_19:48565437-48599986:-|nuORF', 'ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'PLA2G4C|p.I518Sfs*2|1|0.08|ENSG00000105499|chr19:48053015-48053024|TCTCTAAGGA/-|frameshift_variant', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C'] 32397 13244 GGGGFGGF True PC9_epitope_Rep2 654.2761748331 654.2756249679301 56.219 1 -1.928876996412907 0.4434866424964676 1.0 ['ENSG00000167768|ENST00000252244|KRT1', 'CON__P04264'] 86988 25044 QRWHWQKKV True PC9_epitope_Rep6 1294.70470841702 1294.7036099358602 111.34 2 -1.928912974230529 0.4434866424964676 1.0 ['KMO|p.V412M|1|0.13|ENSG00000117009|chr1:241590237-241590237|G/A|missense_variant', 'nc|ENSG00000117009|O15229-3|KMO', 'nc|ENSG00000117009|O15229-2|KMO', 'ENSG00000117009|ENST00000366559|KMO'] 120768 6483 VGCCCQNY True NCI_RA007_Epitope_Rep5 888.2928301503598 888.29172993586 31.603 2 -1.9289582601348227 0.4434878804806186 1.0 ['ENST00000347770.8_1_8:103862280-103870277:-|nuORF'] 36583 10966 GVLGKILV True NCI_RA007_Epitope_Rep3 797.5374748962099 797.53636993586 50.224 2 -1.928989698751123 0.4434878804806186 1.0 ['ADRA1A|p.N44K|1|0.16|ENSG00000120907|chr8:26864838-26864838|G/T|missense_variant'] 38994 23615 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 98.156 3 -1.929647364529943 0.4435377875136911 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 107596 7827 TAGFPGSP True H1975_Epitope_Rep3 732.34425439292 732.3437049679301 35.085 1 -1.9298441509189501 0.44356578788841305 1.0 ['CON__P04258', 'nc|ENSG00000168542|P02461-2|COL3A1', 'ENSG00000168542|ENST00000304636|COL3A1'] 12344 8068 DIVVGEGTHF True H1975_Epitope_Rep3 1072.5189242795998 1072.5178299358602 36.007 2 -1.9301799207254373 0.44360474031236996 1.0 ['ENSG00000167085|ENST00000300408|PHB1', 'ENST00000393345.8_1_17:47486298-47490626:-|nuORF', 'nc|ENSG00000167085|P35232-2|PHB1', 'ENST00000532859.1_1_11:43755320-43755701:+|nuORF'] 15498 7583 EAQPQLLDLRI True H1975_Epitope_Rep1 1294.7245003717399 1294.7234099358602 34.16 2 -1.9304626788521775 0.443605975641812 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 79462 7132 PGPLSKQGS True PC9_epitope_Rep6 869.46068112749 869.45958993586 36.494 2 -1.9305028880479598 0.443605975641812 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 97354 14066 SFYHRCKPWHW True NCI_RA007_Epitope_Rep1 1545.7088078212898 1545.70770993586 58.743 2 -1.9305596336007076 0.44361206943759923 1.0 ['ENST00000398805.7_1_9:115142364-115166433:+|nuORF'] 36243 12603 GVGGGFGGG True NCI_RA007_Epitope_Rep1 663.2976385536699 663.2970949679301 53.005 1 -1.9307422707543325 0.4436181630999058 1.0 ['CON__P19012', 'ENSG00000171346|ENST00000254043|KRT15'] 69785 5349 LWRIYSYSYLF True NCI_RA007_Epitope_Rep2 1509.7656369077301 1509.76399490379 25.425 3 -1.9307570928955413 0.4436193980812196 1.0 ['ENSG00000143199|ENST00000367851|ADCY10', 'nc|ENSG00000143199|Q96PN6-4|ADCY10', 'nc|ENSG00000143199|Q96PN6-2|ADCY10', 'nc|ENSG00000143199|Q96PN6-3|ADCY10'] 12168 9507 DIKLRVSEW True NCI_RA007_Epitope_Rep1 1144.62405805448 1144.62296993586 40.975 2 -1.9307700728935966 0.4436193980812196 1.0 ['nc|ENSG00000058056|Q92995-2|USP13', 'ENSG00000058056|ENST00000263966|USP13', 'USP13|p.I633*|1|0.14|ENSG00000058056|chr3:179754823-179754823|C/-|frameshift_variant', 'USP13|p.R474Lfs*25|1|0.36|ENSG00000058056|chr3:179742237-179742237|G/-|frameshift_variant'] 137270 26295 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 106.59 1 -1.9309661372657843 0.4436425364144124 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 59762 16832 LGYIVSSR True PC9_epitope_Rep1 893.4970666362101 893.49596993586 69.569 2 -1.9310208189191245 0.4436425364144124 1.0 ['NWD1|p.G1273Afs*12|2|0.44|ENSG00000188039|chr19:16807665-16807665|G/-|frameshift_variant', 'ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 41620 5051 IDGRWSPWSPW True NCI_RA007_Epitope_Rep1 1385.6516697846498 1385.6500349037901 23.731 3 -1.9311879823365745 0.44364377080777995 1.0 ['ENST00000461848.1_1_6:169634823-169637340:-|nuORF', 'THBS2|p.F916Lfs*85|1|0.19|ENSG00000186340|chr6:169225170-169225170|G/-|frameshift_variant', 'ENSG00000186340|ENST00000617924|THBS2'] 11510 10813 DGGTVWLEVL True NCI_RA007_Epitope_Rep2 1087.5549754351498 1087.5538699358601 46.664 2 -1.9312173760939861 0.44364377080777995 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2', 'nc|ENSG00000070610|Q9HCG7-3|GBA2'] 72665 11797 MWTLYCLTDK True NCI_RA007_Epitope_Rep1 1272.58826679272 1272.5876749679298 49.866 1 -1.931333414925269 0.44364986365577735 1.0 ['nc|ENSG00000154040|O75952-5|CABYR', 'ENSG00000154040|ENST00000399496|CABYR'] 76413 4814 NSQETERCERA True H1975_Epitope_Rep3 1321.56807638333 1321.56696993586 23.643 2 -1.9315339539411023 0.4436730000547555 1.0 ['ENSG00000023608|ENST00000216294|SNAPC1'] 69585 99 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 0.5161 3 -1.931580199411611 0.4436730000547555 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 42992 9016 IGDVKVRTL True PC9_epitope_Rep5 999.60767971435 999.60658993586 39.625 2 -1.9321690423740323 0.44371194533269087 1.0 ['ENST00000477109.1_1_X:53226904-53227733:-|nuORF'] 84341 15951 QFSLTEPMK True NCI_RA007_Epitope_Rep4 1079.53213181559 1079.53102993586 69.226 2 -1.9322970228329874 0.4437289880307062 1.0 ['nc|ENSG00000269307|Q9NWV8-3|BABAM1', 'ENST00000595393.5_1_19:17378325-17387472:+|nuORF', 'nc|ENSG00000269307|Q9NWV8-2|BABAM1', 'ENST00000594247.5_1_19:17379766-17388064:+|nuORF', 'ENSG00000105393|ENST00000598188|BABAM1'] 110714 23004 TKDIVLRASS True PC9_epitope_Rep5 1088.61897267404 1088.6178699358602 93.475 2 -1.9325386614407267 0.4437314527874202 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 103031 24861 SQKPSVLLTLR True NCI_RA007_Epitope_Rep1 1240.7503211967598 1240.74922993586 102.91 2 -1.932627370091904 0.4437314527874202 1.0 ['nc|ENSG00000124299|P12955-3|PEPD', 'ENST00000570572.1_1_17:53638398-53638659:-|nuORF', 'ENST00000590408.1_1_19:33953899-34001945:-|nuORF', 'nc|ENSG00000124299|P12955-2|PEPD', 'ENSG00000124299|ENST00000244137|PEPD'] 139012 23818 YSHCSRQT True NCI_RA007_Epitope_Rep5 980.41341366524 980.41230993586 98.981 2 -1.9326389268929847 0.4437314527874202 1.0 ['ENST00000360943.9_1_17:47004499-47005111:+|nuORF'] 118991 14377 VEFIPSLLYFG True NCI_RA007_Epitope_Rep2 1283.6801759482698 1283.67906993586 60.589 2 -1.9326733385872308 0.4437314527874202 1.0 ['ENSG00000101337|ENST00000398022|TM9SF4', 'ENST00000479591.1_1_20:30749036-30753244:+|nuORF'] 77936 6451 PAIVVLLM True PC9_epitope_Rep4 854.52994698762 854.52884993586 31.91 2 -1.932774999883424 0.4437375440748122 1.0 ['ENSG00000138768|ENST00000514213|USO1', 'nc|ENSG00000138768|O60763-2|USO1'] 112811 4879 TPLSAAAHTH True PC9_epitope_Rep6 1004.5039429218 1004.50284993586 26.298 2 -1.932895729910708 0.4437606762734878 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 53110 20169 KSFIRKDHLRK True NCI_RA007_Epitope_Rep4 1426.8521009267 1426.85044490379 87.273 3 -1.9329218496576392 0.4437606762734878 1.0 ['nc|ENSG00000181220|Q6NUN9|ZNF746', 'nc|ENSG00000181220|Q6NUN9-2|ZNF746', 'ENSG00000181220|ENST00000458143|ZNF746', 'nc|ENSG00000181220|Q6NUN9-3|ZNF746'] 126198 3138 VPGLHQWPEEV True PC9_epitope_Rep5 1289.6404363946099 1289.63878490379 17.078 3 -1.933054618577 0.4437728576747038 1.0 ['ENST00000248846.9_2_22:50664617-50678653:-|nuORF'] 133428 10315 WFWWYWQKEKI True H1975_Epitope_Rep1 1698.8347195270596 1698.83362993586 44.624 2 -1.9330708776681524 0.4437728576747038 1.0 ['ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000001036|ENST00000002165|FUCA2'] 3302 9127 AGGKVLRE True PC9_epitope_Rep5 828.4817509252399 828.48064993586 40.053 2 -1.9332473566219017 0.4437911287761828 1.0 ['nc|ENSG00000029153|Q8WYA1-4|BMAL2', 'nc|ENSG00000029153|Q8WYA1-5|BMAL2', 'nc|ENSG00000029153|Q8WYA1-2|BMAL2', 'ENSG00000029153|ENST00000266503|BMAL2'] 112556 23952 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 99.506 2 -1.9332854879323498 0.4437911287761828 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 20357 24139 EPHAAFYA True NCI_RA007_Epitope_Rep5 904.40791727864 904.40682993586 100.26 2 -1.9332864829837149 0.4437911287761828 1.0 ['ENSG00000126583|ENST00000263431|PRKCG', 'nc|ENSG00000126583|P05129-2|PRKCG'] 37730 22714 HASLQHRKP True PC9_epitope_Rep2 1072.58900995844 1072.5879099358601 92.865 2 -1.9334635830090983 0.44381911748603964 1.0 ['ENSG00000174945|ENST00000683327|AMZ1', 'nc|ENSG00000174945|Q400G9-2|AMZ1'] 69034 2931 LVHVKETVSKP True NCI_RA007_Epitope_Rep1 1235.72377209575 1235.72266993586 15.24 2 -1.9338991924498612 0.4438641440021022 1.0 ['nc|ENSG00000180316|Q8N8W4-2|PNPLA1', 'nc|ENSG00000180316|Q8N8W4-3|PNPLA1', 'KCTD20-PNPLA1|1|fusion', 'nc|ENSG00000180316|Q8N8W4|PNPLA1', 'ENSG00000180316|ENST00000636260|PNPLA1'] 137274 26624 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 108.17 1 -1.9339166695038725 0.4438641440021022 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 61876 24249 LLLFIFFIPAF True PC9_epitope_Rep2 1339.7944178548698 1339.79278490379 98.814 3 -1.9340561150023972 0.4438763220706418 1.0 ['ENST00000377270.7_1_9:71687674-71687986:+|nuORF'] 7747 7677 ASTLIFFL True PC9_epitope_Rep4 910.51640509846 910.51530993586 36.909 2 -1.9341606944210876 0.4438763220706418 1.0 ['nc|ENSG00000164638|Q7RTT9-2|SLC29A4', 'ENSG00000164638|ENST00000396872|SLC29A4'] 34419 22805 GPWQGGRR True H1975_Epitope_Rep2 912.4678321965998 912.46672993586 94.161 2 -1.93431718220005 0.4438897282620596 1.0 ['ENSG00000171388|ENST00000429967|APLN'] 68387 7345 LTSSPRLK True PC9_epitope_Rep2 900.53926580136 900.53816993586 33.633 2 -1.9344839872378747 0.4438897282620596 1.0 ['ENST00000397632.7_1_11:408839-409933:-|nuORF'] 15707 8894 EDAERREREER True H1975_Epitope_Rep3 1473.6920310264902 1473.6909299358601 39.208 2 -1.93448408667596 0.4438897282620596 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 80238 22025 PLCFFPVV True H1975_Epitope_Rep3 920.4829967951998 920.48188993586 92.099 2 -1.934545519978773 0.4438897282620596 1.0 ['ENST00000504260.5_1_17:47779261-47782716:-|nuORF', 'ENST00000513508.1_1_17:47781399-47782716:-|nuORF'] 58493 23069 LEYRPVKVRG True H1975_Epitope_Rep2 1215.7087907379498 1215.70714490379 95.194 3 -1.934711188527407 0.4438934139078648 1.0 ['nc|ENSG00000148290|Q15526-2|SURF1', 'ENSG00000148290|ENST00000371974|SURF1'] 39417 26195 HMAPEIRELLT True H1975_Epitope_Rep3 1308.68600668804 1308.68437490379 109.16 3 -1.9347142976388916 0.4438934139078648 1.0 ['PWWP2B|p.V577M|1|0.05|ENSG00000171813|chr10:132406229-132406229|G/A|missense_variant'] 15704 8893 EDAERREREER True H1975_Epitope_Rep1 1473.6920310264902 1473.6909299358601 39.111 2 -1.934718381815682 0.4438934139078648 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 62898 17078 LMSSGGSK True H1975_Epitope_Rep2 765.3690892417701 765.36854496793 70.956 1 -1.9347711301592287 0.4438934139078648 1.0 ['ENST00000492961.1_1_7:35271114-35293240:-|nuORF', 'ENSG00000164532|ENST00000408931|TBX20'] 18643 7986 ELARYNPSPL True NCI_RA007_Epitope_Rep1 1158.6033226099 1158.6022299358601 35.057 2 -1.9350624933816296 0.4438934139078648 1.0 ['ENSG00000205209|ENST00000601241|SCGB2B2'] 24813 22676 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 94.412 2 -1.935111284119733 0.4438934139078648 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 135677 13921 YEGPQLDIWSL True PC9_epitope_Rep4 1319.6397676882698 1319.6386699358602 61.449 2 -1.9354608439467267 0.4438995018884449 1.0 ['ENSG00000142178|ENST00000270162|SIK1'] 58721 25277 LFLAGLQQ True NCI_RA007_Epitope_Rep3 888.5069030439201 888.50580993586 109.24 2 -1.9358049707494318 0.4439274845094476 1.0 ['nc|ENSG00000061273|Q8WUI4-3|HDAC7', 'nc|ENSG00000061273|Q8WUI4-4|HDAC7', 'nc|ENSG00000061273|Q8WUI4|HDAC7', 'nc|ENSG00000061273|Q8WUI4-7|HDAC7', 'nc|ENSG00000061273|Q8WUI4-6|HDAC7', 'ENSG00000061273|ENST00000080059|HDAC7', 'nc|ENSG00000061273|Q8WUI4-8|HDAC7'] 137276 26837 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 109.19 1 -1.9358214434803598 0.44393357198375427 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 44557 12844 IPDDLNSIR True NCI_RA007_Epitope_Rep4 1041.54547338061 1041.54436993586 56.486 2 -1.9359146204737026 0.44393965932477997 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'nc|ENSG00000160710|P55265-5|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 81081 24013 PPFLDHSP True PC9_epitope_Rep4 908.4392174069201 908.43812993586 100.84 2 -1.936099436012263 0.4439603743637458 1.0 ['ENST00000560131.1_1_15:63356108-63358095:+|nuORF'] 17654 5269 EHRGPVQVT True PC9_epitope_Rep2 1021.53049202281 1021.52938993586 25.654 2 -1.9361445780710145 0.4439603743637458 1.0 ['ENSG00000104814|ENST00000396857|MAP4K1', 'nc|ENSG00000104814|Q92918|MAP4K1', 'chr19:38596001-38596078|190|16.73|0.04|8.81|-|2|MAP4K1,None|3', 'ENST00000588938.1_1_19:39086232-39087718:-|nuORF'] 90167 14871 RHERIEAPW True PC9_epitope_Rep3 1192.6101393258398 1192.60849490379 62.338 3 -1.9361465352529876 0.4439603743637458 1.0 ['ENSG00000158042|ENST00000288937|MRPL17'] 52918 25013 KRIKQLHH True PC9_epitope_Rep3 1058.64613091174 1058.64502993586 101.56 2 -1.9364588350275076 0.4439603743637458 1.0 ['ENSG00000122512|ENST00000265849|PMS2', 'ENST00000431453.1_1_7:6777424-6779847:+|nuORF', 'ENST00000486256.5_1_7:6777424-6791020:+|nuORF'] 15714 13219 EDAERREREER True PC9_epitope_Rep5 1473.6920310264902 1473.6909299358601 55.854 2 -1.9366099590791417 0.4439603743637458 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 82787 23270 PVRRQRGRR True PC9_epitope_Rep5 1179.7173387893897 1179.71624993586 94.494 2 -1.936626131620888 0.4439603743637458 1.0 ['nc|ENSG00000137075|Q9H0F5-3|RNF38', 'nc|ENSG00000137075|Q9H0F5-4|RNF38', 'nc|ENSG00000137075|Q9H0F5-2|RNF38', 'ROCK1-RNF38|1|fusion', 'ENSG00000137075|ENST00000259605|RNF38', 'ROCK1-RNF38|2|fusion'] 140769 23457 YYRLLITHL True PC9_epitope_Rep4 1190.68117900778 1190.68008993586 98.515 2 -1.9367626777899807 0.4439603743637458 1.0 ['nc|ENSG00000134779|Q68CL5-1|TPGS2', 'nc|ENSG00000134779|Q68CL5-4|TPGS2', 'ENSG00000134779|ENST00000334295|TPGS2', 'nc|ENSG00000134779|Q68CL5-3|TPGS2', 'nc|ENSG00000134779|Q68CL5-5|TPGS2'] 126151 22968 VPFLHIRCL True PC9_epitope_Rep1 1096.62155595668 1096.62097496793 93.146 1 -1.9369992495379684 0.4439992994439336 1.0 ['chr3:153927317-153979854|138|13.17|0.05|7.92|-|0|TE_info:L1PB1,L1PB1_dup2586,L1,LINE,donor,+,153979854,153983404|LINC02006,None|26'] 133548 24465 WHRAQAKP True H1975_Epitope_Rep3 992.5304324531598 992.52932993586 101.83 2 -1.9372335147904358 0.4440272776032488 1.0 ['FAM167B|p.R56H|1|0.16|ENSG00000183615|chr1:32247588-32247588|G/A|missense_variant'] 22055 8698 ESRRRHSSM True H1975_Epitope_Rep1 1144.55197282672 1144.5508699358602 38.387 2 -1.9376215586420138 0.4440613404262306 1.0 ['ENST00000556508.5_1_14:105344279-105346651:+|nuORF'] 123160 17325 VHGGAGGA True NCI_RA007_Epitope_Rep4 624.29797290684 624.29742496793 75.027 1 -1.937681999605992 0.4440613404262306 1.0 ['ENST00000582754.5_1_17:39081604-39092927:-|nuORF', 'ENSG00000108244|ENST00000209718|KRT23', 'CON__Q9C075', 'KRT23|p.S44F|1|0.53|ENSG00000108244|chr17:40936473-40936473|G/A|missense_variant'] 32337 23430 GGASKWPV True PC9_epitope_Rep3 800.4180880395198 800.41698993586 95.4 2 -1.9379019940181477 0.4440893169877408 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 127673 20674 VRFLSGRA True NCI_RA007_Epitope_Rep1 904.5242844435598 904.52318993586 84.643 2 -1.9380866451093695 0.4440929886390999 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-3|TOGARAM2', 'ENST00000475900.1_1_2:29256310-29268401:+|nuORF'] 80543 8187 PLLTFASQPS True H1975_Epitope_Rep3 1059.5600608155898 1059.5589699358602 36.471 2 -1.9380877063802884 0.4440929886390999 1.0 ['ENST00000379328.7_1_10:8097346-8097625:+|nuORF'] 29136 4570 FTTLPSPS True NCI_RA007_Epitope_Rep2 848.42798401688 848.42688993586 22.403 2 -1.9381072543784752 0.4440929886390999 1.0 ['ENST00000542466.2_1_12:58120838-58121579:+|nuORF'] 8950 2695 AVGQQKELP True PC9_epitope_Rep1 968.5290950404798 968.52798993586 14.789 2 -1.9381132969721784 0.4440929886390999 1.0 ['MAP3K14|p.L634*|1|0.1|ENSG00000006062|chr17:45270486-45270486|C/-|frameshift_variant', 'ENSG00000006062|ENST00000344686|MAP3K14'] 124480 25049 VLFASSHT True PC9_epitope_Rep5 860.43921740692 860.43812993586 101.49 2 -1.9381244927028036 0.4440929886390999 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 82030 9897 PSTQRAVISP True NCI_RA007_Epitope_Rep5 1054.5771078620598 1054.5760099358602 44.712 2 -1.9381253739982605 0.4440929886390999 1.0 ['nc|ENSG00000147081|Q5JQC9-2|AKAP4', 'ENSG00000147081|ENST00000358526|AKAP4'] 10415 14900 CLPALASS True NCI_RA007_Epitope_Rep5 760.3789256494802 760.37782993586 63.981 2 -1.9384897189285513 0.4441209627108256 1.0 ['ENST00000589445.1_1_19:901889-913148:-|nuORF', 'ENST00000590454.2_1_19:900936-902165:-|nuORF', 'ENSG00000198858|ENST00000361574|R3HDM4'] 137277 27116 YLGKAKPL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 110.67 1 -1.9385852331717335 0.4441221858617255 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 10496 4951 CNICVLYQT True PC9_epitope_Rep5 1055.47798806775 1055.47688993586 24.08 2 -1.9386904661556175 0.4441221858617255 1.0 ['ENSG00000151148|ENST00000342494|UBE3B', 'UBE3B|p.N894Tfs*43|1|0.12|ENSG00000151148|chr12:109529938-109529938|A/-|frameshift_variant', 'ENST00000535900.5_1_12:109939233-109948161:+|nuORF', 'nc|ENSG00000151148|Q7Z3V4-2|UBE3B'] 1598 24463 AEFLVKSK True H1975_Epitope_Rep3 920.53311779176 920.53202993586 101.83 2 -1.9390298949822022 0.4441392141840867 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 97302 13860 SFRWSLALSP True PC9_epitope_Rep6 1162.6134933707797 1162.6123899358602 65.134 2 -1.9392483789194879 0.4441671865252651 1.0 ['ENST00000477173.3_1_11:35006185-35041800:+|nuORF'] 43813 19838 IKLAGDSFI True PC9_epitope_Rep3 962.5436824754601 962.54258993586 81.542 2 -1.9392914161207158 0.4441842139824016 1.0 ['ENSG00000166012|ENST00000448108|TAF1D'] 122708 11961 VGTVVVGR True PC9_epitope_Rep1 785.4759372688098 785.47484993586 50.873 2 -1.9394889153308417 0.4441878789205279 1.0 ['RANBP17|p.G504V|1|0.31|ENSG00000204764|chr5:170953639-170953639|G/T|missense_variant'] 63237 8458 LPADDFDIY True PC9_epitope_Rep3 1067.4811417885498 1067.48004993586 37.497 2 -1.9395462924572227 0.4441878789205279 1.0 ['ENSG00000170236|ENST00000532404|USP50', 'nc|ENSG00000170236|Q70EL3|USP50'] 120719 10135 VGASARLL True PC9_epitope_Rep6 785.47593726881 785.47484993586 49.602 2 -1.9396029118122142 0.4441878789205279 1.0 ['ENST00000521575.1_1_17:4803525-4803825:+|nuORF', 'ENSG00000205710|ENST00000381365|C17orf107'] 24816 23837 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 99.055 2 -1.9396411024883848 0.4441878789205279 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 36309 9734 GVGQVLGP True NCI_RA007_Epitope_Rep3 725.4071890026498 725.4066449679301 45.358 1 -1.9397879863134344 0.4441878789205279 1.0 ['ENST00000478597.5_1_9:140007734-140009165:-|nuORF'] 44153 19249 ILPSGSSDVK True PC9_epitope_Rep1 1001.53932537101 1001.53822993586 78.841 2 -1.939795484938668 0.4441878789205279 1.0 ['ENST00000451653.5_2_3:42589940-42590111:-|nuORF'] 99020 15833 SKQKKRRY True H1975_Epitope_Rep3 1092.651610215 1092.65050993586 66.35 2 -1.9399147425653136 0.44419396141345385 1.0 ['ENST00000282964.5_1_21:21112145-21112373:+|nuORF'] 62521 20848 LLSTWQRL True PC9_epitope_Rep4 1015.5814649665099 1015.58036993586 88.345 2 -1.9401285018338101 0.44422193040052527 1.0 ['ENSG00000205730|ENST00000381440|ITPRIPL2', 'ENST00000566735.1_1_16:19125342-19127388:+|nuORF'] 81406 24797 PPVVGKVK True PC9_epitope_Rep4 822.5327238689399 822.53162993586 103.88 2 -1.940280234609231 0.4442498987754566 1.0 ['ENSG00000102967|ENST00000219240|DHODH'] 3867 23900 AHCEASAR True H1975_Epitope_Rep3 843.36573519683 843.3651849679301 99.645 1 -1.940403622599023 0.4442559803900112 1.0 ['ENST00000453424.6_1_10:45952026-45952551:-|nuORF'] 32773 22905 GICIKKCP True PC9_epitope_Rep3 860.4612158048 860.46066496793 93.371 1 -1.9404274858058976 0.44426206187146405 1.0 ['ENSG00000164163|ENST00000296577|ABCE1'] 61903 23848 LLLKRKLLL True PC9_epitope_Rep1 1108.80598559808 1108.80488993586 96.531 2 -1.940468738519893 0.44427908605445154 1.0 ['ENST00000342992.10_3_2:179510673-179515519:-|nuORF'] 103969 11739 SRRENLVHQIQ True PC9_epitope_Rep5 1378.74294440054 1378.74130490379 50.155 3 -1.9405957794922555 0.44428882493899835 1.0 ['CD163|p.G1087R|1|0.17|ENSG00000177575|chr12:7481245-7481245|C/T|missense_variant'] 91850 22629 RPNHHHRR True PC9_epitope_Rep6 1108.58632461984 1108.5857749679299 100.09 1 -1.94062043028212 0.44428882493899835 1.0 ['ENST00000399848.7_2_18:13438339-13645232:+|nuORF', 'ENST00000585931.5_1_18:13612043-13645232:+|nuORF', 'ENST00000359446.9_2_18:13438339-13645232:+|nuORF', 'ENST00000435606.1_1_18:13620942-13645232:+|nuORF', 'ENST00000361303.7_1_18:13620942-13645232:+|nuORF'] 107615 6972 TAGSFSLSVR True NCI_RA007_Epitope_Rep3 1023.53490869691 1023.5343749679301 34.532 1 -1.9406919039522925 0.44428882493899835 1.0 ['ENSG00000182866|ENST00000336890|LCK', 'nc|ENSG00000182866|P06239-3|LCK', 'nc|ENSG00000182866|P06239-2|LCK', 'ENST00000469765.5_1_1:32739930-32745396:+|nuORF'] 78090 22171 PALYPRAEA True PC9_epitope_Rep1 986.5185303567798 986.51742993586 90.098 2 -1.9409230170085894 0.44428882493899835 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|344|3|anti-sense'] 137265 23798 YLGKAKPL True NCI_RA007_Epitope_Rep3 888.5432885526399 888.54274496793 103.14 1 -1.9409288396349662 0.44428882493899835 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 42897 22611 IFVFMFPL True H1975_Epitope_Rep1 1012.5455970517598 1012.54448993586 94.041 2 -1.9409464857848282 0.44428882493899835 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 110582 24627 TISLRKLKER True H1975_Epitope_Rep1 1242.77720465094 1242.77554490379 102.04 3 -1.9409569275430831 0.44428882493899835 1.0 ['ENST00000359314.5_1_6:47471138-47501404:+|nuORF'] 37412 10527 GVYTLLTT True NCI_RA007_Epitope_Rep5 866.4749342092999 866.4743849679301 47.126 1 -1.9411600120080454 0.4443046698097728 1.0 ['KDM2A-C11orf80|3|fusion', 'KDM2A-C11orf80|2|fusion', 'KDM2A-C11orf80|1|fusion', 'nc|ENSG00000173715|Q8N6T0-5|TOP6BL', 'ENSG00000173715|ENST00000540737|C11orf80', 'nc|ENSG00000173715|Q8N6T0-4|TOP6BL', 'nc|ENSG00000173715|Q8N6T0-1|TOP6BL'] 131678 24474 VWMKRAQF True PC9_epitope_Rep2 1064.5589557001197 1064.55784993586 99.729 2 -1.9413597897887938 0.4443046698097728 1.0 ['IGSF9B|p.P956Lfs*37|1|0.34|ENSG00000080854|chr11:133920863-133920863|C/-|frameshift_variant', 'nc|ENSG00000080854|Q9UPX0|IGSF9B', 'ENSG00000080854|ENST00000533871|IGSF9B'] 40882 12906 HVNKINSDRVP True H1975_Epitope_Rep1 1277.68403254209 1277.68292993586 54.717 2 -1.941370677552806 0.4443046698097728 1.0 ['NMD3|p.M393I|1|0.22|ENSG00000169251|chr3:161247306-161247306|G/C|missense_variant'] 22732 9643 ETYWYLWRFT True NCI_RA007_Epitope_Rep1 1463.6873865870298 1463.68628993586 41.509 2 -1.9413713550229665 0.4443046698097728 1.0 ['REL-MAN1A2|1|fusion', 'ENSG00000198162|ENST00000356554|MAN1A2', 'MAN1A2|p.H546L|1|0.13|ENSG00000198162|chr1:117499514-117499514|A/T|missense_variant'] 115321 14630 TVDSM[Oxidation]IPEVIK True NCI_RA007_Epitope_Rep1 1246.64789022426 1246.6473749679299 60.958 1 -1.9414244090483812 0.4443046698097728 1.0 ['nc|ENSG00000103222|P33527-8|ABCC1', 'nc|ENSG00000103222|P33527-6|ABCC1', 'nc|ENSG00000103222|P33527-7|ABCC1', 'nc|ENSG00000103222|P33527-5|ABCC1', 'nc|ENSG00000103222|P33527-4|ABCC1', 'nc|ENSG00000103222|P33527-2|ABCC1', 'nc|ENSG00000103222|P33527-3|ABCC1', 'ENSG00000103222|ENST00000399410|ABCC1', 'nc|ENSG00000103222|P33527-9|ABCC1'] 123658 17303 VILYAQPSERS True H1975_Epitope_Rep1 1261.6666511424498 1261.66554993586 72.016 2 -1.9415454808455304 0.4443046698097728 1.0 ['nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF', 'nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6'] 82288 23751 PTPHCSHS True NCI_RA007_Epitope_Rep5 864.3548361599601 864.35372993586 98.704 2 -1.941603525513161 0.4443046698097728 1.0 ['ENST00000360535.8_1_19:36523251-36523727:-|nuORF'] 10718 22789 CTSEACCCCC True PC9_epitope_Rep2 1024.2250871373199 1024.2239899358601 93.147 2 -1.9416872978962285 0.4443046698097728 1.0 ['ENST00000431629.5_2_7:114654517-114655986:+|nuORF', 'ENSG00000135272|ENST00000393486|MDFIC', 'nc|ENSG00000135272|Q9P1T7-1|MDFIC'] 78673 22407 PECCPGEM True H1975_Epitope_Rep2 864.2815967603199 864.28048993586 92.601 2 -1.9416896500833785 0.4443046698097728 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 33263 16718 GLANKAAA True H1975_Epitope_Rep3 714.4024379753799 714.4018849679301 69.833 1 -1.9419570115396165 0.4443046698097728 1.0 ['ENST00000409226.5_1_2:201676959-201677028:+|nuORF'] 58540 10256 LFDEIHWI True PC9_epitope_Rep1 1071.53893144819 1071.5378299358601 44.333 2 -1.942152509890969 0.4443046698097728 1.0 ['nc|ENSG00000100271|O95922-4|TTLL1', 'ENSG00000100271|ENST00000266254|TTLL1'] 89918 25044 RFSTFLLNLF True PC9_epitope_Rep3 1256.6917436914798 1256.6906499358602 101.68 2 -1.942163032779803 0.4443046698097728 1.0 ['chrX:133536293-133572316|126|33.06|0.4|6.38|-|0|TE_info:L1MB8,L1MB8_dup9573,L1,LINE,donor,+,133572316,133573782|GPC3,None|1'] 24812 22567 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 93.987 2 -1.9422642497868785 0.4443046698097728 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 73094 16636 NDNSPAFP True H1975_Epitope_Rep2 860.36644638948 860.36534993586 69.222 2 -1.9422689007258196 0.4443046698097728 1.0 ['ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant'] 131539 23401 VVVGVGLIVG True PC9_epitope_Rep6 910.5851533646199 910.5846049679301 103.12 1 -1.9423171410011546 0.4443046698097728 1.0 ['ENPEP|p.A521Qfs*11|2|0.34|ENSG00000138792|chr4:110520057-110520057|G/-|frameshift_variant', 'ENSG00000138792|ENST00000265162|ENPEP'] 121774 10904 VGMHFMVN True PC9_epitope_Rep2 933.42007926881 933.4189899358599 47.262 2 -1.942397336507552 0.4443046698097728 1.0 ['ENST00000396161.9_2_19:58131980-58132310:+|nuORF'] 99922 20259 SLIDMNDIEDD True PC9_epitope_Rep4 1278.52856255678 1278.5274699358602 86.069 2 -1.9425517808617943 0.4443046698097728 1.0 ['ENSG00000112234|ENST00000369244|FBXL4'] 121498 8134 VGKGHPFQ True NCI_RA007_Epitope_Rep3 868.4555361773998 868.45442993586 39.101 2 -1.9428886677673363 0.4443046698097728 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|37|2|sense'] 138060 20519 YQDQIPRTL True PC9_epitope_Rep3 1132.58767254576 1132.58656993586 84.187 2 -1.9428913607056701 0.4443046698097728 1.0 ['ENSG00000169018|ENST00000306917|FEM1B'] 137264 24734 YLGKAKPL True NCI_RA007_Epitope_Rep2 888.5432885526399 888.54274496793 103.97 1 -1.942960796781109 0.4443046698097728 1.0 ['ENST00000432223.2_1_11:73141522-73179519:-|nuORF'] 117904 18775 VAQKVKPNL True PC9_epitope_Rep5 995.6127650947899 995.61166993586 77.231 2 -1.943331787791768 0.4443046698097728 1.0 ['ENSG00000132300|ENST00000254630|PTCD3', 'ENST00000484203.5_1_2:86348636-86354493:+|nuORF', 'ENST00000480102.1_1_2:86352635-86354493:+|nuORF', 'ENST00000594883.1_1_19:57687347-57687830:+|nuORF'] 92669 23409 RRGKAGRA True NCI_RA007_Epitope_Rep3 870.5260157790598 870.52490993586 101.62 2 -1.9433665429044453 0.4443046698097728 1.0 ['ENSG00000135835|ENST00000367588|KIAA1614'] 114691 18029 TSSKGKKGKK True NCI_RA007_Epitope_Rep5 1047.6400424717897 1047.6389499358602 76.146 2 -1.9435980669632507 0.4443046698097728 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 121539 9003 VGKMRAVA True NCI_RA007_Epitope_Rep4 830.4796427502598 830.47854993586 41.462 2 -1.9436083078774204 0.4443046698097728 1.0 ['ENSG00000132671|ENST00000255008|SSTR4'] 69594 1524 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 7.9153 3 -1.9436114348637648 0.4443046698097728 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 109155 19447 TFPFLFAVMF True PC9_epitope_Rep4 1218.61473924074 1218.6136499358602 82.917 2 -1.9437636591589282 0.4443046698097728 1.0 ['ENSG00000185344|ENST00000330342|ATP6V0A2', 'ENST00000533005.5_1_11:67811775-67815272:+|nuORF', 'nc|ENSG00000033627|Q93050-1|ATP6V0A1', 'ENSG00000033627|ENST00000343619|ATP6V0A1', 'nc|ENSG00000033627|Q93050-3|ATP6V0A1', 'ENSG00000110719|ENST00000265686|TCIRG1', 'nc|ENSG00000110719|Q13488-2|TCIRG1', 'ENSG00000105929|ENST00000310018|ATP6V0A4'] 77858 9550 PAGKGGGG True H1975_Epitope_Rep1 599.30272393411 599.30217496793 41.659 1 -1.9438650250286322 0.44431074843028723 1.0 ['nc|ENSG00000090372|Q9NRL3-3|STRN4', 'ENSG00000090372|ENST00000263280|STRN4'] 119554 6583 VERFHENPA True H1975_Epitope_Rep3 1097.52540664237 1097.5243099358602 30.278 2 -1.9443971870332788 0.4443776176364452 1.0 ['ENSG00000283632|ENST00000413988|EXOC3L2', 'nc|ENSG00000283632|Q2M3D2|EXOC3L2'] 101421 13683 SNLLHSIK True PC9_epitope_Rep5 910.52361573722 910.52250993586 57.659 2 -1.9446604109861718 0.4443776176364452 1.0 ['nc|ENSG00000171502|Q17RW2-2|COL24A1', 'ENSG00000171502|ENST00000370571|COL24A1'] 60729 27063 LKAKKPQKRKP True PC9_epitope_Rep3 1320.8717737421198 1320.8701349037901 111.34 3 -1.9447052281195807 0.4443776176364452 1.0 ['ENST00000464696.2_1_12:83545187-83545313:+|nuORF'] 79304 25513 PGKHHRRR True PC9_epitope_Rep1 1042.60091205482 1042.59980993586 103.13 2 -1.9447326859254004 0.4443776176364452 1.0 ['ENST00000315150.9_1_3:128813878-128840609:-|nuORF'] 92988 22757 RRQRTHSL True PC9_epitope_Rep2 1052.59515796804 1052.59406993586 93.027 2 -1.9447548487659765 0.4443776176364452 1.0 ['ENST00000501520.1_1_16:28303156-28303378:-|nuORF'] 61057 17851 LLATQRFL True PC9_epitope_Rep5 960.5756513100799 960.57454993586 73.683 2 -1.94493102628387 0.4443776176364452 1.0 ['nc|ENSG00000168763|Q8NE01-2|CNNM3', 'nc|ENSG00000168763|Q8NE01-3|CNNM3', 'ENSG00000168763|ENST00000305510|CNNM3', 'ENST00000465224.5_1_2:97490916-97493694:+|nuORF'] 105881 13952 SVLAKFSL True PC9_epitope_Rep5 863.5116540711899 863.51054993586 58.688 2 -1.9450067646410643 0.4443776176364452 1.0 ['ENSG00000103148|ENST00000611875|NPRL3'] 104581 23540 SSSSSFRN True PC9_epitope_Rep3 870.38315908278 870.38206993586 95.827 2 -1.9450615291682647 0.4443776176364452 1.0 ['nc|ENSG00000174652|Q14584|ZNF266', 'ENSG00000174652|ENST00000592904|ZNF266'] 88624 25339 RAPRLRVFLN True PC9_epitope_Rep3 1240.7516586094398 1240.75056993586 102.89 2 -1.945109426545347 0.4443776176364452 1.0 ['ENST00000469408.5_1_7:105148961-105162615:-|nuORF'] 69749 23603 LWKMSILKV True NCI_RA007_Epitope_Rep3 1116.6729228232 1116.6718299358602 102.38 2 -1.9452768974447878 0.4443776176364452 1.0 ['ENST00000550125.5_1_12:49399131-49412528:-|nuORF'] 101224 9183 SLWAWVERE True H1975_Epitope_Rep1 1174.5771078620598 1174.5760099358602 40.229 2 -1.9452785488400328 0.4443776176364452 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 26985 23322 FLLCPEHI True PC9_epitope_Rep5 970.49462410806 970.49352993586 94.687 2 -1.9452979316152985 0.4443776176364452 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant', 'KMT2C|p.Q726Rfs*4|1|0.29|ENSG00000055609|chr7:152248254-152248258|TTCTG/-|frameshift_variant', 'KMT2C|p.V996Wfs*35|1|0.15|ENSG00000055609|chr7:152224608-152224608|T/-|frameshift_variant', 'ENST00000496773.1_1_21:11039429-11058260:-|nuORF'] 58103 19457 LERTNQLK True PC9_epitope_Rep6 1000.5665431783599 1000.56544993586 87.504 2 -1.9453314885521624 0.4443776176364452 1.0 ['nc|ENSG00000133401|O15018-2|PDZD2', 'ENSG00000133401|ENST00000438447|PDZD2'] 58838 18318 LFRMLIRLL True PC9_epitope_Rep2 1173.74200544253 1173.7403549037901 75.789 3 -1.9453464594981926 0.4443776176364452 1.0 ['ENSG00000141449|ENST00000424526|GREB1L', 'nc|ENSG00000141449|Q9C091-3|GREB1L', 'ENST00000578955.1_1_18:19057140-19088617:+|nuORF'] 79443 6646 PGPLSKQGS True NCI_RA007_Epitope_Rep2 869.46068112749 869.45958993586 30.461 2 -1.9453598847648212 0.4443776176364452 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 133377 22871 WFLNRKIIIH True PC9_epitope_Rep4 1338.79246079226 1338.79081490379 96.191 3 -1.9454215879145065 0.4443776176364452 1.0 ['ENST00000311806.7_1_3:38295131-38295401:+|nuORF'] 91061 24453 RLLGPQTRP True H1975_Epitope_Rep1 1036.6141620771198 1036.61306993586 101.37 2 -1.9458621205525033 0.4443776176364452 1.0 ['ENST00000393599.2_1_19:10677298-10677478:-|nuORF'] 6450 12040 APSPRDPAPL True PC9_epitope_Rep4 1019.5399940773499 1019.53888993586 54.118 2 -1.9458707633302157 0.4443776176364452 1.0 ['ENST00000318291.4_1_12:752234-753264:+|nuORF'] 79708 24709 PHPIVLGI True NCI_RA007_Epitope_Rep2 844.5170738048 844.51596993586 103.87 2 -1.9459132616109553 0.4443776176364452 1.0 ['ENST00000397354.7_1_X:39933702-39933888:-|nuORF'] 54957 7430 LAHPRTLA True PC9_epitope_Rep4 877.5133854066901 877.5122899358599 35.93 2 -1.9459354712655665 0.4443776176364452 1.0 ['NHLRC1|p.A275Pfs*20|1|0.2|ENSG00000187566|chr6:18121784-18121784|C/-|frameshift_variant', 'ENSG00000187566|ENST00000340650|NHLRC1'] 26979 27028 FLKRKNFQPRI True H1975_Epitope_Rep2 1445.8619373344097 1445.86030490379 111.53 3 -1.945936591221733 0.4443776176364452 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|26|1|sense'] 128654 13156 VSLNNREI True PC9_epitope_Rep3 943.50869394907 943.50758993586 55.634 2 -1.9459533549744235 0.4443776176364452 1.0 ['ENST00000419769.6_1_10:127452041-127452143:+|nuORF'] 119379 24561 VENRNGRKH True PC9_epitope_Rep2 1108.5849872071599 1108.58447496793 100.1 1 -1.9459602040534374 0.4443776176364452 1.0 ['ENSG00000189108|ENST00000372582|IL1RAPL2', 'IL1RAPL2|p.H332Y|1|0.54|ENSG00000189108|chrX:105740637-105740637|C/T|missense_variant'] 93878 21811 RVGRLKHDI True H1975_Epitope_Rep2 1092.651610215 1092.65050993586 90.203 2 -1.9460805435761577 0.4443776176364452 1.0 ['ENSG00000197343|ENST00000252713|ZNF655', 'nc|ENSG00000197343|Q8N720-3|ZNF655'] 83453 6687 QDDGGSPI True NCI_RA007_Epitope_Rep2 787.33481190803 787.33426496793 30.624 1 -1.9461375948841568 0.4443776176364452 1.0 ['nc|ENSG00000149294|P13591-3|NCAM1', 'nc|ENSG00000149294|P13591-4|NCAM1', 'nc|ENSG00000149294|P13591-1|NCAM1', 'ENSG00000149294|ENST00000316851|NCAM1', 'ENST00000525355.5_1_11:113105759-113131080:+|nuORF'] 82901 23234 PVYRGFWAVL True PC9_epitope_Rep1 1206.6549642599398 1206.65386993586 94.16 2 -1.9461612998025288 0.4443776176364452 1.0 ['ENST00000484094.1_1_2:103414278-103431424:+|nuORF'] 120480 25070 VFVLWLLQ True PC9_epitope_Rep2 1016.6058888092 1016.60478993586 102.1 2 -1.946187402694396 0.4443776176364452 1.0 ['ENST00000228506.7_1_12:121136755-121136905:+|nuORF'] 63205 17168 LNVRKAAHEAL True NCI_RA007_Epitope_Rep5 1220.6989543302398 1220.6978499358602 72.809 2 -1.9462027392429477 0.4443776176364452 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000560935.1_1_14:24652387-24652645:-|nuORF', 'ENST00000561379.1_1_14:24651787-24652670:-|nuORF'] 125280 17844 VLRQAKAN True NCI_RA007_Epitope_Rep2 898.5348491272599 898.53374993586 74.148 2 -1.9462463851364333 0.4443776176364452 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2', 'nc|ENSG00000152404|Q2TBE0-2|CWF19L2', 'CWF19L2|p.A394Ifs*9|1|0.27|ENSG00000152404|chr11:107429055-107429056|AA/-|frameshift_variant', 'nc|ENSG00000152404|Q2TBE0-3|CWF19L2'] 36675 10446 GVLSEGTC True NCI_RA007_Epitope_Rep5 764.33745476032 764.3369049679301 46.812 1 -1.946321390467299 0.4443836934651387 1.0 ['ENST00000320954.10_2_3:33185806-33186025:+|nuORF'] 39416 26626 HMAPEIRELLT True H1975_Epitope_Rep2 1308.68600668804 1308.68437490379 109.68 3 -1.9465798186827246 0.44439706075318197 1.0 ['PWWP2B|p.V577M|1|0.05|ENSG00000171813|chr10:132406229-132406229|G/A|missense_variant'] 95418 21925 SAKKPCPV True PC9_epitope_Rep6 828.4527592960799 828.45166993586 97.239 2 -1.946662382224855 0.44439706075318197 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 122188 21830 VGRLKHERV True PC9_epitope_Rep3 1092.651610215 1092.65050993586 89.269 2 -1.9466929738838012 0.44439706075318197 1.0 ['ENSG00000092148|ENST00000399332|HECTD1', 'HEATR5A-HECTD1|1|fusion'] 17133 17414 EGTRWLDYVR True H1975_Epitope_Rep1 1293.64658440421 1293.64548993586 72.458 2 -1.9467540314295715 0.44439706075318197 1.0 ['nc|ENSG00000014914|A4FU01-4|MTMR11', 'ENSG00000014914|ENST00000439741|MTMR11', 'nc|ENSG00000014914|A4FU01-6|MTMR11', 'ENST00000482025.5_1_1:149902834-149905606:-|nuORF'] 23383 2887 EVVDLGGL True NCI_RA007_Epitope_Rep1 800.4279840168799 800.42688993586 15.053 2 -1.9468954143011428 0.4444140706155074 1.0 ['nc|ENSG00000105676|Q6NXE6-2|ARMC6', 'ENSG00000105676|ENST00000535612|ARMC6'] 18501 27812 EKNWKAMEALA True PC9_epitope_Rep1 1289.6438075228898 1289.64217490379 114.22 3 -1.9469593400650334 0.44442014564699195 1.0 ['ENSG00000125844|ENST00000377813|RRBP1', 'nc|ENSG00000125844|Q9P2E9-3|RRBP1'] 119888 20459 VEVVKETI True PC9_epitope_Rep1 915.5276980581499 915.52660993586 83.507 2 -1.947128313165293 0.44442379182156133 1.0 ['CDKAL1|p.E168K|2|0.39|ENSG00000145996|chr6:20758628-20758628|G/A|missense_variant'] 48141 28010 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 118.47 3 -1.9471658538890835 0.44442379182156133 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 8911 22497 AVGHHISE True PC9_epitope_Rep6 848.4140652882401 848.41296993586 99.534 2 -1.9473185191294617 0.44442379182156133 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 94244 20067 RWRLPLTCLLL True NCI_RA007_Epitope_Rep4 1382.82204666838 1382.8204049037902 86.792 3 -1.947392532179625 0.44442379182156133 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 134434 26993 WTHGAQGG True H1975_Epitope_Rep2 812.3565504121198 812.35544993586 111.37 2 -1.947507590721693 0.44442379182156133 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 73629 22505 NGHNFSIG True PC9_epitope_Rep4 844.38276515996 844.38166993586 94.796 2 -1.9475555336061636 0.44442379182156133 1.0 ['ENST00000589530.5_1_18:61022616-61034411:-|nuORF'] 136161 19162 YGHSTVLI True NCI_RA007_Epitope_Rep5 888.4705175352 888.46942993586 80.578 2 -1.9476161753310377 0.4444408002623811 1.0 ['ENSG00000124702|ENST00000326974|KLHDC3', 'ENST00000244670.12_1_6:42984918-42985899:+|nuORF'] 81322 11849 PPRFTKGL True NCI_RA007_Epitope_Rep3 914.5337864980999 914.53268993586 53.73 2 -1.947750983155556 0.4444408002623811 1.0 ['PCDH17|p.G757Afs*24|1|0.44|ENSG00000118946|chr13:57634814-57634814|G/-|frameshift_variant', 'nc|ENSG00000118946|O14917-2|PCDH17', 'ENSG00000118946|ENST00000377918|PCDH17'] 127347 25706 VQPGKKNP True PC9_epitope_Rep1 866.4974009893799 866.49630993586 103.92 2 -1.9478898644585334 0.4444408002623811 1.0 ['ENSG00000138615|ENST00000261883|CILP', 'CILP|p.G732Afs*25|1|0.49|ENSG00000138615|chr15:65198091-65198091|C/-|frameshift_variant'] 108181 17329 TDVHGVMF True NCI_RA007_Epitope_Rep5 904.41128840692 904.41018993586 73.43 2 -1.9478958167447515 0.4444408002623811 1.0 ['nc|ENSG00000089472|Q9BQS7-2|HEPH', 'ENSG00000089472|ENST00000343002|HEPH', 'nc|ENSG00000089472|Q9BQS7-3|HEPH', 'nc|ENSG00000089472|Q9BQS7-4|HEPH'] 23307 7001 EVSQKSLWN True NCI_RA007_Epitope_Rep1 1089.5454733806098 1089.54436993586 31.23 2 -1.9480004564636664 0.4444408002623811 1.0 ['ENSG00000122728|ENST00000242310|TAF1L', 'TAF1L|p.A666Gfs*38|1|0.45|ENSG00000122728|chr9:32633585-32633586|-/T|frameshift_variant', 'ENST00000483365.1_1_X:70596867-70597689:+|nuORF', 'nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'nc|ENSG00000147133|P21675-16|TAF1', 'nc|ENSG00000147133|P21675-21|TAF1', 'nc|ENSG00000147133|P21675-24|TAF1', 'nc|ENSG00000147133|P21675-23|TAF1'] 10232 5321 CFIYLSKPGQW True H1975_Epitope_Rep1 1340.6587293110397 1340.65762993586 25.529 2 -1.9480004644173436 0.4444408002623811 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 83751 14865 QEDQERRR True PC9_epitope_Rep5 1115.54318196483 1115.54208993586 62.181 2 -1.9481490640008725 0.4444408002623811 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 120219 24457 VFMAPPVH True NCI_RA007_Epitope_Rep5 896.4578446765199 896.45674993586 101.54 2 -1.9482036709035666 0.4444408002623811 1.0 ['nc|ENSG00000083307|Q6ISB3-2|GRHL2', 'ENSG00000083307|ENST00000646743|GRHL2'] 67715 6084 LTGHLCAP True PC9_epitope_Rep1 810.40580910366 810.40470993586 28.216 2 -1.9482632595987173 0.4444408002623811 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 63943 25114 LPYHEVYT True PC9_epitope_Rep5 1020.4916469025999 1020.49054993586 101.74 2 -1.9482864927616526 0.4444408002623811 1.0 ['ENSG00000011028|ENST00000303375|MRC2', 'MRC2|p.W1035Lfs*33|2|0.27|ENSG00000011028|chr17:62688539-62688540|-/T|frameshift_variant', 'MRC2-VMP1|1|fusion', 'MRC2|p.K360Qfs*95|1|0.3|ENSG00000011028|chr17:62667492-62667493|-/C|frameshift_variant'] 136256 21507 YGRRLVMSIR True PC9_epitope_Rep4 1249.70774519213 1249.7071749679299 90.908 1 -1.9483250450019736 0.44444808850699113 1.0 ['ENSG00000132383|ENST00000254719|RPA1'] 31143 12091 GDASSSRH True H1975_Epitope_Rep2 815.3521933076702 815.35108993586 51.59 2 -1.9483851892320407 0.44444808850699113 1.0 ['ENSG00000146063|ENST00000315073|TRIM41', 'nc|ENSG00000146063|Q8WV44-3|TRIM41', 'ENST00000510072.1_1_5:180660754-180661772:+|nuORF', 'ENST00000508930.1_1_5:180660600-180661772:+|nuORF'] 121055 7780 VGFQEAMK True PC9_epitope_Rep1 908.4425885351998 908.44148993586 34.749 2 -1.948643528284436 0.44444808850699113 1.0 ['ENSG00000158470|ENST00000371711|B4GALT5'] 60988 25571 LLAKPKLDP True PC9_epitope_Rep3 993.6222671493299 993.6211699358599 103.85 2 -1.94874680563546 0.4444650939064652 1.0 ['nc|ENSG00000129116|Q8WX93-3|PALLD', 'nc|ENSG00000129116|Q8WX93|PALLD'] 39408 24153 HLWRRGVSGHV True PC9_epitope_Rep2 1302.7057710461802 1302.70411490379 98.43 3 -1.9490362306262143 0.4444748089767274 1.0 ['ENST00000455372.2_1_19:2736989-2737118:-|nuORF'] 92054 22230 RPRRYRAP True PC9_epitope_Rep3 1070.62097879306 1070.61988993586 90.792 2 -1.94916370360995 0.4444748089767274 1.0 ['ENSG00000185372|ENST00000641551|OR2V1'] 55009 11891 LAKLGGAG True H1975_Epitope_Rep1 685.4122743830899 685.41172496793 50.739 1 -1.9491959058599528 0.4444748089767274 1.0 ['ENSG00000213906|ENST00000533293|LTB4R2'] 40191 4198 HRFWNLWRSQI True NCI_RA007_Epitope_Rep1 1541.8003997070098 1541.79874490379 20.429 3 -1.9492828869183012 0.4444748089767274 1.0 ['nc|ENSG00000198089|A8K8P3-4|SFI1', 'nc|ENSG00000198089|A8K8P3-10|SFI1', 'nc|ENSG00000198089|A8K8P3-3|SFI1', 'nc|ENSG00000198089|A8K8P3-9|SFI1', 'nc|ENSG00000198089|A8K8P3-2|SFI1', 'ENSG00000198089|ENST00000400288|SFI1', 'nc|ENSG00000198089|A8K8P3-5|SFI1', 'ENST00000382162.7_1_22:31904270-32000328:+|nuORF', 'SFI1|p.E436Afs*118|1|0.1|ENSG00000198089|chr22:31583929-31583930|AG/-|frameshift_variant'] 19458 9285 ELPVVDETTTL True H1975_Epitope_Rep1 1215.62344891779 1215.62234993586 40.626 2 -1.9492958984966495 0.4444748089767274 1.0 ['ENSG00000158158|ENST00000377075|CNNM4'] 58829 23265 LFRGKMVSYI True PC9_epitope_Rep4 1212.6689000719198 1212.66837496793 97.742 1 -1.949299569377464 0.4444748089767274 1.0 ['ENST00000565455.5_1_16:8987857-9023250:-|nuORF', 'nc|ENSG00000187555|Q93009-3|USP7', 'ENSG00000187555|ENST00000344836|USP7'] 3341 19725 AGHGTPEP True PC9_epitope_Rep3 764.3453170220799 764.34420993586 81.1 2 -1.9493269586735995 0.4444748089767274 1.0 ['ENST00000594213.5_1_19:6380294-6381826:-|nuORF'] 122295 14629 VGRTLAGHSKW True NCI_RA007_Epitope_Rep2 1210.6570895182597 1210.6559899358601 61.569 2 -1.9495600805118585 0.4444905944976992 1.0 ['ENSG00000073536|ENST00000442241|NLE1'] 121298 19373 VGHLEVMMNAK True H1975_Epitope_Rep3 1227.6103992196302 1227.6093099358602 81.203 2 -1.949636348176218 0.4444905944976992 1.0 ['ENST00000534544.5_2_11:13298505-13371514:+|nuORF'] 80860 21183 PLVMRWFL True PC9_epitope_Rep4 1060.58919319924 1060.5880899358601 89.643 2 -1.9497913012492447 0.4444905944976992 1.0 ['ENST00000554401.1_1_14:102549915-102549966:-|nuORF'] 38996 24551 HKEEWIRW True PC9_epitope_Rep3 1182.5934266325398 1182.59179490379 99.79 3 -1.9499127401510916 0.4444905944976992 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 63309 9313 LPDARKYIY True PC9_epitope_Rep5 1137.61824439805 1137.6171499358602 40.775 2 -1.9499151318084442 0.4444905944976992 1.0 ['ENST00000318220.10_1_1:21793599-21793725:+|nuORF'] 122913 8418 VGVSSRPL True PC9_epitope_Rep2 813.4708518883699 813.46974993586 37.751 2 -1.9501011323643709 0.4444905944976992 1.0 ['ENSG00000099338|ENST00000409235|CATSPERG'] 104497 20622 SSPLYVMK True PC9_epitope_Rep5 923.47863969075 923.47754993586 84.373 2 -1.9501176103797466 0.4444905944976992 1.0 ['ENST00000229595.5_1_6:119228977-119229145:+|nuORF'] 95419 22126 SAKKPCPV True PC9_epitope_Rep6 828.4527592960799 828.45166993586 98.049 2 -1.9501326333048856 0.4444905944976992 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 90286 19714 RHSERVRAA True NCI_RA007_Epitope_Rep4 1080.5900725876 1080.5889699358602 85.195 2 -1.9505065440709546 0.44450759645862936 1.0 ['nc|ENSG00000117385|Q32P28-4|P3H1', 'nc|ENSG00000117385|Q32P28-3|P3H1'] 37655 8735 HAGSPSAHEAP True PC9_epitope_Rep1 1059.47337106951 1059.4722699358601 38.437 2 -1.9511012670361518 0.44454159926550957 1.0 ['nc|ENSG00000159733|Q9HCC9-5|ZFYVE28', 'nc|ENSG00000159733|Q9HCC9-4|ZFYVE28', 'nc|ENSG00000159733|Q9HCC9-3|ZFYVE28', 'nc|ENSG00000159733|Q9HCC9-2|ZFYVE28', 'ENSG00000159733|ENST00000290974|ZFYVE28'] 89551 19855 RERRKSLFK True NCI_RA007_Epitope_Rep4 1218.7309231648599 1218.7292849037901 85.819 3 -1.9511268045978927 0.44454159926550957 1.0 ['ENSG00000099308|ENST00000687212|MAST3'] 85166 6122 QKAARIGG True PC9_epitope_Rep3 799.4664352142698 799.46532993586 28.596 2 -1.9515203218472645 0.44455374122893304 1.0 ['ENST00000551745.1_1_12:81568635-81593297:+|nuORF'] 88709 18407 RCRFLLFV True NCI_RA007_Epitope_Rep5 1052.5953412088397 1052.59424993586 77.613 2 -1.9516422322476643 0.44455374122893304 1.0 ['nc|ENSG00000101181|Q9H4K7-2|MTG2', 'ENSG00000101181|ENST00000370823|MTG2'] 34418 22712 GPWQGGRR True H1975_Epitope_Rep2 912.4678321965998 912.46672993586 93.801 2 -1.951821456118525 0.44455981201158534 1.0 ['ENSG00000171388|ENST00000429967|APLN'] 10236 5500 CFIYLSKPGQW True NCI_RA007_Epitope_Rep5 1340.6587293110397 1340.65762993586 27.844 2 -1.9518798047749994 0.4445658826615371 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 42710 15356 IEYIGQPAGE True H1975_Epitope_Rep3 1075.5185899264297 1075.51748993586 64.477 2 -1.9519241470880548 0.44456830601092895 1.0 ['KMT2D|p.T5429Qfs*22|1|0.1|ENSG00000167548|chr12:49022621-49022643|GCCACCTCGTTCCGAATGATGGT/-|frameshift_variant'] 19708 10971 ELSIDGLLNR True NCI_RA007_Epitope_Rep1 1128.6138872936 1128.61278993586 46.668 2 -1.95207533380744 0.44456830601092895 1.0 ['ENSG00000159086|ENST00000331923|PAXBP1', 'ENST00000497873.1_1_21:34107263-34123563:-|nuORF'] 82272 18451 PTMIRAFPAN True PC9_epitope_Rep5 1116.5749996870798 1116.57390993586 75.994 2 -1.95207668318442 0.44456830601092895 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 18887 8741 ELELCYRS True PC9_epitope_Rep1 1011.46953155903 1011.46842993586 38.461 2 -1.9520958115639797 0.44456830601092895 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'nc|ENSG00000091592|Q9C000-3|NLRP1', 'nc|ENSG00000091592|Q9C000-4|NLRP1', 'ENST00000574512.1_1_17:5409229-5421219:-|nuORF'] 48829 11243 KERQEQRQRHE True H1975_Epitope_Rep1 1522.7712844066998 1522.7701899358601 48.222 2 -1.9522982237585333 0.4445962339209408 1.0 ['ENST00000394009.4_1_14:74486078-74489636:+|nuORF'] 38456 23647 HGVSHVVP True H1975_Epitope_Rep2 830.43988611326 830.43878993586 97.453 2 -1.9524063272954584 0.4446023037747809 1.0 ['ENSG00000148156|ENST00000374667|ACTL7B'] 37442 3983 GWVFEMGD True PC9_epitope_Rep2 939.3796539254698 939.37854993586 20.582 2 -1.9528424229571695 0.44465815702045813 1.0 ['ENST00000536837.1_1_12:121837446-121837686:-|nuORF'] 114690 17939 TSSKGKKGKK True NCI_RA007_Epitope_Rep5 1047.6400424717897 1047.6389499358602 75.79 2 -1.9531024743579632 0.44465815702045813 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 32157 21889 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 91.322 2 -1.953211628508464 0.4446751543631495 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 32155 19970 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 83.73 2 -1.9533306144300313 0.44468122308919633 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 115945 9276 TVPRAFLK True H1975_Epitope_Rep3 930.5650866263799 930.56398993586 40.674 2 -1.9538235605680512 0.44472735220194515 1.0 ['ENSG00000131386|ENST00000339732|GALNT15'] 119266 12896 VELDTLAA True H1975_Epitope_Rep3 830.4385487005799 830.43744993586 54.829 2 -1.953946925387117 0.44472735220194515 1.0 ['ENSG00000167325|ENST00000300738|RRM1'] 78770 7921 PEKAPPAAP True PC9_epitope_Rep4 876.4705175351999 876.46942993586 37.898 2 -1.9540242160137846 0.44472735220194515 1.0 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1', 'ENST00000587856.1_1_17:43318772-43319102:+|nuORF'] 112756 15510 TPKQASAT True NCI_RA007_Epitope_Rep3 802.4184819623399 802.41738993586 68.569 2 -1.9540541817961319 0.44472735220194515 1.0 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 64912 12005 LSCGRKNP True PC9_epitope_Rep1 873.4490708979699 873.44796993586 51.039 2 -1.9543148568820237 0.44474434767405013 1.0 ['nc|ENSG00000088305|Q9UBC3-7|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-4|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-8|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-3|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-5|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-2|DNMT3B', 'nc|ENSG00000088305|Q9UBC3-6|DNMT3B', 'ENSG00000088305|ENST00000328111|DNMT3B'] 28068 11010 FRDLLHIGTQ True PC9_epitope_Rep6 1198.6458561282197 1198.64422490379 53.244 3 -1.9548019629754514 0.44479412536060847 1.0 ['ENSG00000178814|ENST00000618853|OPLAH'] 60737 21485 LKARPAQR True NCI_RA007_Epitope_Rep1 938.57738264558 938.57628993586 87.911 2 -1.9548901846468365 0.44480019232240225 1.0 ['ENST00000396865.6_1_5:54993817-55008116:-|nuORF', 'ENST00000506624.5_2_5:55007270-55008116:-|nuORF', 'ENST00000513993.5_1_5:55000175-55008116:-|nuORF'] 91200 25063 RLRAALRPRPR True PC9_epitope_Rep3 1360.86400302308 1360.8629099358602 101.75 2 -1.9549999072379156 0.44481353191210377 1.0 ['ENST00000221665.4_1_19:56104161-56104986:-|nuORF'] 95772 22106 SCTIADLS True H1975_Epitope_Rep2 808.36366950816 808.36256993586 91.373 2 -1.9550602543520776 0.44481353191210377 1.0 ['ENST00000304056.8_1_7:32919423-32919537:-|nuORF'] 63202 16631 LNVRKAAHEAL True NCI_RA007_Epitope_Rep3 1220.6989543302398 1220.6978499358602 73.2 2 -1.955176965479062 0.44481353191210377 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000560935.1_1_14:24652387-24652645:-|nuORF', 'ENST00000561379.1_1_14:24651787-24652670:-|nuORF'] 10184 20041 CCRGPLVKM True PC9_epitope_Rep2 1005.49219866325 1005.4916749679301 82.492 1 -1.9551926293914967 0.44481353191210377 1.0 ['ENSG00000176531|ENST00000292140|PHLDB3'] 59338 5893 LGKAAGPG True NCI_RA007_Epitope_Rep2 669.38097425481 669.38042496793 27.538 1 -1.9556013354986352 0.4448365913089085 1.0 ['ENST00000400385.2_1_21:45231454-45232126:-|nuORF'] 57867 20206 LEQELKQIVKR True NCI_RA007_Epitope_Rep5 1382.82454876618 1382.82344993586 84.665 2 -1.9557342726798395 0.4448365913089085 1.0 ['ENSG00000131558|ENST00000253861|EXOC4', 'nc|ENSG00000131558|Q96A65-2|EXOC4', 'ENST00000462055.5_1_7:132937857-133164897:+|nuORF', 'ENST00000486013.5_1_7:132937857-133314895:+|nuORF', 'EXOC4|p.E327Gfs*21|1|0.11|ENSG00000131558|chr7:133356539-133356540|-/G|frameshift_variant'] 131694 24246 VWRLLSHQA True PC9_epitope_Rep4 1108.61416207712 1108.61306993586 101.74 2 -1.9558233397688947 0.4448426573426573 1.0 ['nc|ENSG00000213995|Q8IW45-2|NAXD'] 79547 19437 PGSKPFCPT True NCI_RA007_Epitope_Rep5 932.4425885351999 932.44148993586 81.652 2 -1.9558310340417024 0.44484872324384567 1.0 ['ENSG00000213445|ENST00000534313|SIPA1'] 92824 25058 RRLKKKKTTIK True PC9_epitope_Rep2 1398.9510866919798 1398.94998993586 102.05 2 -1.9560800754059522 0.44489849435108497 1.0 ['nc|ENSG00000134207|Q5T7P8-2|SYT6', 'ENSG00000134207|ENST00000610222|SYT6'] 68425 8333 LTTKTKLMML True NCI_RA007_Epitope_Rep2 1178.6766878743 1178.6750549037902 37.054 3 -1.9563649898179114 0.44491298600565893 1.0 ['ENST00000421865.2_1_6:129714284-129714326:+|nuORF'] 120632 23518 VGAIYIRRRPR True PC9_epitope_Rep3 1355.8262205320298 1355.82512993586 95.742 2 -1.9565078757934236 0.44491298600565893 1.0 ['nc|ENSG00000244005|Q9Y697-2|NFS1', 'ENSG00000244005|ENST00000374092|NFS1', 'ENST00000480655.5_1_20:34262894-34263203:-|nuORF', 'nc|ENSG00000244005|Q9Y697-3|NFS1'] 86137 23506 QPRVQRPRPRR True PC9_epitope_Rep5 1444.8599802717997 1444.8588899358601 95.398 2 -1.956616906971778 0.44491298600565893 1.0 ['nc|ENSG00000140320|Q8TBE0-3|BAHD1', 'nc|ENSG00000140320|Q8TBE0-2|BAHD1', 'ENSG00000140320|ENST00000416165|BAHD1'] 36492 6812 GVKFMPYTTYL True H1975_Epitope_Rep3 1318.6631459851399 1318.66204993586 31.156 2 -1.9566742959015713 0.44491298600565893 1.0 ['nc|ENSG00000174227|Q5H8A4-4|PIGG', 'nc|ENSG00000174227|Q5H8A4-2|PIGG', 'ENSG00000174227|ENST00000453061|PIGG', 'ENST00000502311.1_1_4:493115-495466:+|nuORF', 'nc|ENSG00000174227|Q5H8A4-3|PIGG'] 81535 13062 PQVVRVGG True NCI_RA007_Epitope_Rep5 810.4711862415398 810.47008993586 56.921 2 -1.9568168671297481 0.44491298600565893 1.0 ['nc|ENSG00000168477|P22105-1|TNXB', 'ENSG00000168477|ENST00000644971|TNXB', 'nc|ENSG00000168477|P22105-4|TNXB', 'TNXB|p.R2720Qfs*63|1|0.51|ENSG00000168477|chr6:32061470-32061471|GC/-|frameshift_variant', 'TNXB|p.P3212Lfs*4|1|0.45|ENSG00000168477|chr6:32052891-32052891|G/-|frameshift_variant', 'TNXB|p.T3316Qfs*58|1|0.15|ENSG00000168477|chr6:32050233-32050233|C/-|frameshift_variant', 'TNXB|p.G3470Afs*51|1|0.22|ENSG00000168477|chr6:32049359-32049359|C/-|frameshift_variant'] 80055 23900 PKGKMIPVLH True PC9_epitope_Rep2 1118.6634207686598 1118.66232993586 97.41 2 -1.9568493929844384 0.44491298600565893 1.0 ['ENSG00000106341|ENST00000342032|PPP1R17', 'nc|ENSG00000106341|O96001-2|PPP1R17'] 129482 17035 VTESPLHPS True NCI_RA007_Epitope_Rep3 965.4818104948899 965.4812649679301 74.871 1 -1.956926461446169 0.44491298600565893 1.0 ['ENSG00000181143|ENST00000397910|MUC16', 'MUC16|p.S13631Afs*59|1|0.5|ENSG00000181143|chr19:8886856-8886856|G/-|frameshift_variant', 'MUC16|p.T11364Qfs*16|1|0.13|ENSG00000181143|chr19:8936866-8936866|C/-|frameshift_variant', 'MUC16|p.K9370Qfs*48|1|0.24|ENSG00000181143|chr19:8948662-8948663|-/G|frameshift_variant', 'MUC16|p.Q9082Kfs*38|1|0.35|ENSG00000181143|chr19:8949526-8949526|G/-|frameshift_variant', 'MUC16|p.S7713Lfs*5|1|0.15|ENSG00000181143|chr19:8953634-8953634|G/-|frameshift_variant', 'MUC16|p.T4203Nfs*24|1|0.23|ENSG00000181143|chr19:8964161-8964162|GG/-|frameshift_variant', 'MUC16|p.T2806Lfs*14|1|0.17|ENSG00000181143|chr19:8972724-8972724|G/-|frameshift_variant'] 73597 19103 NGEQIIRRR True NCI_RA007_Epitope_Rep1 1140.64758746372 1140.64648993586 78.447 2 -1.9570163100888394 0.44491298600565893 1.0 ['nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'ENSG00000104447|ENST00000395715|TRPS1'] 4561 18069 AKWYNQNRTLT True H1975_Epitope_Rep1 1393.7102472899298 1393.70914993586 75.286 2 -1.957245490550752 0.44491298600565893 1.0 ['ENST00000598115.1_1_19:51906295-51906697:-|nuORF'] 128581 7954 VSKGGCGS True H1975_Epitope_Rep3 693.31157436565 693.31102496793 35.564 1 -1.957268290006804 0.44491298600565893 1.0 ['KRTAP5-1|p.G225V|1|0.37|ENSG00000205869|chr11:1584576-1584576|C/A|missense_variant'] 5998 22488 APLKIKTM True PC9_epitope_Rep4 900.54665968092 900.54556993586 94.731 2 -1.9574555674909577 0.44491298600565893 1.0 ['ENST00000411807.1_1_11:5543719-5544284:-|nuORF'] 38993 23468 HKEEWIRW True NCI_RA007_Epitope_Rep5 1182.5934266325398 1182.59179490379 97.574 3 -1.9576428272615845 0.44491298600565893 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 80590 21937 PLPCSHPA True H1975_Epitope_Rep2 820.39015903952 820.38906993586 90.702 2 -1.9577284158211705 0.44491298600565893 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 122036 5087 VGQPSHPV True PC9_epitope_Rep2 819.4239016959499 819.42280993586 24.945 2 -1.958092703336635 0.44491298600565893 1.0 ['ENST00000476089.1_1_2:182321937-182323202:+|nuORF', 'ENST00000465522.5_1_2:182322141-182350724:+|nuORF'] 38655 22875 HHPGQCRA True PC9_epitope_Rep6 904.40860306832 904.40750993586 101.09 2 -1.9581937084533678 0.44491298600565893 1.0 ['ENST00000438447.1_1_5:31799327-31799513:+|nuORF'] 137629 15036 YLVRVDEKHRR True NCI_RA007_Epitope_Rep2 1469.82152907441 1469.8204299358601 63.172 2 -1.9585248442675771 0.4449688111078338 1.0 ['ENSG00000112972|ENST00000325110|HMGCS1'] 126470 22459 VPLTTRGR True PC9_epitope_Rep5 898.5348491272599 898.53374993586 91.391 2 -1.9585339890521067 0.4449688111078338 1.0 ['ENST00000504162.1_1_1:205498135-205498558:+|nuORF'] 59082 11169 LGDSKINKK True PC9_epitope_Rep5 1001.58694426977 1001.58637496793 47.948 1 -1.9587966689751766 0.4449809375034138 1.0 ['ENSG00000133884|ENST00000528416|DPF2', 'ENST00000531989.1_1_11:65113420-65116337:+|nuORF', 'ENST00000524666.5_1_11:65113195-65113594:+|nuORF'] 21248 20757 ERHRRRVISA True NCI_RA007_Epitope_Rep4 1278.73813380362 1278.7370299358602 89.931 2 -1.9587987050513915 0.4449809375034138 1.0 ['L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|99|3|sense'] 76408 18810 NSNQLQPI True PC9_epitope_Rep5 912.4664947839199 912.46538993586 77.365 2 -1.9592447775884985 0.4449930633691271 1.0 ['ENSG00000178295|ENST00000381254|GEN1'] 101585 7904 SPEELQEYLVF True H1975_Epitope_Rep1 1352.6499980187998 1352.64890993586 35.354 2 -1.959256479041812 0.4449930633691271 1.0 ['ENSG00000110455|ENST00000263776|ACCS'] 124971 6656 VLNENNVPL True PC9_epitope_Rep4 1010.53965972418 1010.53856993586 32.774 2 -1.959471511685311 0.4449991261032946 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5'] 81506 22302 PQRIHHMA True NCI_RA007_Epitope_Rep5 988.5025034531601 988.50140993586 92.931 2 -1.959826180684573 0.44500152925241404 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'AFF2|p.P472Nfs*24|2|0.14|ENSG00000155966|chrX:148953596-148953596|C/AA|frameshift_variant', 'nc|ENSG00000155966|P51816-7|AFF2'] 88232 21030 QYDYYSSYFDI True PC9_epitope_Rep1 1462.5928770654998 1462.59124490379 85.721 3 -1.959835150909834 0.44500152925241404 1.0 ['ENSG00000010270|ENST00000009041|STARD3NL', 'nc|ENSG00000010270|O95772-2|STARD3NL', 'ENST00000471550.1_1_7:38247105-38254853:+|nuORF'] 40004 13482 HQSKKWRIQA True H1975_Epitope_Rep3 1280.71018772028 1280.7090899358602 57.134 2 -1.9598800482497631 0.44500152925241404 1.0 ['nc|nan|Q8N5N4-2|C3orf22', 'ENSG00000180697|ENST00000318225|C3orf22'] 134023 3947 WPWRNTSEM True NCI_RA007_Epitope_Rep5 1205.52877777065 1205.52768993586 21.516 2 -1.9603617833540943 0.44500152925241404 1.0 ['ENST00000316637.6_1_6:35277486-35278290:+|nuORF'] 26648 14035 FLAFLYAL True NCI_RA007_Epitope_Rep3 956.53714054304 956.53604993586 62.514 2 -1.9606854727577807 0.4450221178526569 1.0 ['ENSG00000198964|ENST00000361781|SGMS1'] 61012 5807 LLAMKPPG True PC9_epitope_Rep3 825.4782457679298 825.47714993586 27.407 2 -1.960706524781408 0.4450221178526569 1.0 ['ENSG00000171811|ENST00000368586|CFAP46', 'CFAP46|p.T2005Qfs*24|1|0.32|ENSG00000171811|chr10:132847262-132847262|G/-|frameshift_variant'] 119900 12218 VEWDLNRK True NCI_RA007_Epitope_Rep4 1058.55089311422 1058.5497899358602 53.99 2 -1.9607464665373946 0.4450221178526569 1.0 ['ENST00000409580.5_1_2:189157747-189157840:+|nuORF', 'ENST00000359135.7_1_2:189157747-189248499:+|nuORF'] 133990 24157 WPPGLLDGTAD True H1975_Epitope_Rep2 1140.54513902744 1140.54349490379 99.453 3 -1.9607518967699145 0.4450221178526569 1.0 ['ENST00000493232.5_1_7:2580815-2581753:-|nuORF'] 134226 18966 WRRHRHREQER True NCI_RA007_Epitope_Rep1 1644.8570201496798 1644.85592993586 77.919 2 -1.9608133683069602 0.4450221178526569 1.0 ['nc|ENSG00000278259|Q96H55-4|MYO19', 'ENSG00000278259|ENST00000614623|MYO19'] 62359 16581 LLRMIILPLVV True H1975_Epitope_Rep2 1278.8461361579 1278.84448490379 69.005 3 -1.960870342801938 0.4450221178526569 1.0 ['ENSG00000105281|ENST00000542575|SLC1A5'] 71546 20418 MLCILKLASR True NCI_RA007_Epitope_Rep5 1146.6617065164999 1146.66060993586 85.474 2 -1.9608769563514352 0.4450221178526569 1.0 ['RTTN|p.Q2020R|1|0.12|ENSG00000176225|chr18:70020709-70020709|T/C|missense_variant'] 48244 6872 KDEVRYEVNCS True NCI_RA007_Epitope_Rep2 1340.6030649097197 1340.60196993586 31.346 2 -1.9610036687175458 0.44503910175193323 1.0 ['ENSG00000176928|ENST00000652361|GCNT4'] 48117 27751 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 115.31 3 -1.9612091326622867 0.44506334643949325 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 20352 14638 EPGPPSPPAPK True PC9_epitope_Rep4 1072.5553097883198 1072.5542099358602 64.235 2 -1.961474288387188 0.44506334643949325 1.0 ['nc|ENSG00000140481|Q8N5R6-4|CCDC33', 'nc|ENSG00000140481|Q8N5R6-5|CCDC33'] 83697 6261 QEAPPGQRL True PC9_epitope_Rep5 994.5195929859399 994.51848993586 29.06 2 -1.961596078320981 0.44506334643949325 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF'] 107674 4977 TAIVKPQP True NCI_RA007_Epitope_Rep5 852.5069030439199 852.50580993586 25.848 2 -1.961618929180019 0.44506334643949325 1.0 ['ENSG00000114127|ENST00000392981|XRN1', 'nc|ENSG00000114127|Q8IZH2|XRN1', 'XRN1|p.H1196Q|1|0.55|ENSG00000114127|chr3:142356996-142356996|A/T|missense_variant', 'ENST00000467077.1_1_3:142074330-142089377:-|nuORF'] 135978 15808 YFEGIHLD True NCI_RA007_Epitope_Rep5 992.46034677432 992.45924993586 67.524 2 -1.9619081949208261 0.4450803289610205 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ATAD5|p.P1832L|1|0.17|ENSG00000176208|chr17:30894873-30894873|C/T|missense_variant'] 20455 18835 EPRQRRLLL True NCI_RA007_Epitope_Rep4 1179.7200241279897 1179.71947496793 81.473 1 -1.9623002733919794 0.44512521433330055 1.0 ['ENSG00000156381|ENST00000286918|ANKRD9'] 33103 24003 GKKKHRRRPS True PC9_epitope_Rep4 1248.7639546286398 1248.76284993586 100.8 2 -1.9623364535098555 0.44512521433330055 1.0 ['ENSG00000186834|ENST00000332499|HEXIM1'] 95665 6463 SAVSSYRGPE True PC9_epitope_Rep6 1051.4934378077498 1051.4923499358601 33.5 2 -1.9623607997912966 0.4451312742999432 1.0 ['ENST00000470238.1_1_1:169838129-169857981:-|nuORF'] 99038 24103 SKTPVLPQR True H1975_Epitope_Rep2 1024.6029286870798 1024.60182993586 99.246 2 -1.962585292479977 0.4451482553377382 1.0 ['GPR158|p.E1097Q|1|0.12|ENSG00000151025|chr10:25598915-25598915|G/C|missense_variant'] 3667 9294 AGRHGSRGLV True PC9_epitope_Rep4 1008.5577098301599 1008.55660993586 43.356 2 -1.9628540739682738 0.44517615708887576 1.0 ['ENST00000306749.3_1_17:80047580-80048309:-|nuORF'] 136023 23373 YFPLFWSKCV True PC9_epitope_Rep4 1288.6314519340401 1288.63034993586 98.16 2 -1.9629030525170448 0.4451822163006323 1.0 ['ENST00000377258.5_1_1:9937984-9953219:-|nuORF'] 69602 2165 LVTVLQRRRP True H1975_Epitope_Rep1 1236.7778733572798 1236.77623490379 11.208 3 -1.9632290782588653 0.4451882753800454 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 43782 24139 IKARGRFG True NCI_RA007_Epitope_Rep5 903.5402688608699 903.53916993586 100.26 2 -1.963277016706884 0.44518947253467295 1.0 ['ENSG00000114739|ENST00000352511|ACVR2B', 'ENST00000465020.5_1_3:38519799-38524820:+|nuORF'] 64006 24032 LQCYLFLRSV True PC9_epitope_Rep4 1240.66381469148 1240.6627099358602 100.91 2 -1.9633680850345074 0.44518947253467295 1.0 ['ENST00000209875.8_1_12:54628482-54628572:-|nuORF'] 128713 21124 VSPFSNLRW True PC9_epitope_Rep3 1104.5716285587998 1104.5705299358601 86.537 2 -1.963377030689553 0.4451955313363401 1.0 ['nc|ENSG00000211784|A0A0B4J240|TRAV10'] 134550 23141 WVPPPAEN True H1975_Epitope_Rep1 908.43921740692 908.43812993586 96.213 2 -1.963760704803333 0.44521729635291546 1.0 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'ROBO4|p.I751Sfs*43|2|0.13|ENSG00000154133|chr11:124887162-124887162|G/-|frameshift_variant', 'ROBO4|p.L856Cfs*18|2|0.14|ENSG00000154133|chr11:124886692-124886693|AG/T|frameshift_variant', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4'] 112218 23593 TLWLPGPA True H1975_Epitope_Rep1 853.4697892592098 853.4692449679301 97.989 1 -1.9641289154131256 0.44521729635291546 1.0 ['ENST00000164024.4_1_3:48689051-48689879:-|nuORF'] 70711 18486 MDRFFPLVPDL True PC9_epitope_Rep6 1348.6849440588799 1348.68384993586 83.746 2 -1.9641291041534157 0.44521729635291546 1.0 ['nc|ENSG00000156239|Q9Y5N5-2|N6AMT1', 'ENSG00000156239|ENST00000303775|N6AMT1'] 70683 12156 MDKDGYFWFVA True PC9_epitope_Rep2 1377.60635938501 1377.6052699358602 52.069 2 -1.9643013360728465 0.44521729635291546 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 86817 15569 QRPPSNGG True NCI_RA007_Epitope_Rep3 811.39366419683 811.39311496793 68.806 1 -1.9646199212770736 0.44521729635291546 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 38387 23985 HGGGKFKS True H1975_Epitope_Rep3 816.4242360491199 816.42312993586 99.968 2 -1.9646698084138403 0.44521729635291546 1.0 ['ENST00000304979.7_1_1:43124098-43124146:+|nuORF'] 128631 10360 VSLFKRSL True PC9_epitope_Rep5 948.5756513100799 948.57454993586 44.834 2 -1.964670807544556 0.44521729635291546 1.0 ['ENST00000534277.5_1_16:31765895-31765964:+|nuORF'] 86751 17961 QRLGRILKIH True H1975_Epitope_Rep2 1232.78295873772 1232.7823749679299 74.409 1 -1.9647573101796918 0.44521729635291546 1.0 ['nc|ENSG00000172943|Q9UPP1-4|PHF8', 'nc|ENSG00000172943|Q9UPP1-3|PHF8', 'ENSG00000172943|ENST00000338154|PHF8', 'nc|ENSG00000172943|Q9UPP1|PHF8'] 70686 12750 MDKDGYFWFVA True PC9_epitope_Rep5 1377.60635938501 1377.6052699358602 54.05 2 -1.9647852893965996 0.44521729635291546 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 26806 5090 FLEEATEA True NCI_RA007_Epitope_Rep4 908.4127278755599 908.41162993586 26.086 2 -1.9648606041485779 0.44521849271690944 1.0 ['ENST00000505030.5_1_5:87961954-87962140:-|nuORF'] 131214 25537 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 107.9 2 -1.9650307034094632 0.44521849271690944 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 29832 23955 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 98.662 2 -1.9652850715321248 0.44525244584206847 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 101225 8982 SLWAWVERE True H1975_Epitope_Rep3 1174.5771078620598 1174.5760099358602 39.545 2 -1.9652887099316605 0.44525244584206847 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 93153 20085 RRRRNTGRRHL True PC9_epitope_Rep4 1476.872276291 1476.87116993586 85.39 2 -1.9653920845226465 0.44525850302997216 1.0 ['ENST00000434837.7_1_6:37664674-37664983:-|nuORF'] 79525 21816 PGRPPKNR True NCI_RA007_Epitope_Rep3 920.53043245316 920.52932993586 94.779 2 -1.9656617759537371 0.4452681456895799 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1'] 61031 12951 LLARARDKRES True NCI_RA007_Epitope_Rep1 1313.7527808082498 1313.7516899358602 54.367 2 -1.9657261839968883 0.4452681456895799 1.0 ['nc|ENSG00000130529|Q8TD43-2|TRPM4', 'ENSG00000130529|ENST00000252826|TRPM4', 'nc|ENSG00000130529|Q8TD43-3|TRPM4'] 16924 14115 EGDRHPDRWRR True NCI_RA007_Epitope_Rep1 1478.72394029146 1478.72284993586 58.935 2 -1.9658742119257913 0.4452681456895799 1.0 ['ENST00000538304.1_1_12:8540468-8549057:-|nuORF'] 13051 12486 DLREKQQEVLH True H1975_Epitope_Rep3 1393.73137665733 1393.7302699358602 53.222 2 -1.9661499456895988 0.4452681456895799 1.0 ['nc|ENSG00000178104|Q5VU43-3|PDE4DIP', 'nc|ENSG00000178104|Q5VU43|PDE4DIP', 'nc|ENSG00000178104|Q5VU43-4|PDE4DIP', 'ENSG00000178104|ENST00000695795|PDE4DIP', 'ENST00000479369.6_1_1:144864133-144875987:-|nuORF', 'ENST00000420737.1_1:146011237-146016889:+|nuORF'] 33233 14389 GLAEPYVK True H1975_Epitope_Rep1 875.4752685624699 875.47472496793 60.541 1 -1.9663749629839802 0.4452681456895799 1.0 ['ENST00000424556.2_1_11:1856509-1858658:+|nuORF', 'ENSG00000149043|ENST00000341958|SYT8'] 32822 10845 GIGGSHWPV True H1975_Epitope_Rep3 908.4504507969599 908.44990496793 46.797 1 -1.966478148973928 0.4452681456895799 1.0 ['ENSG00000188784|ENST00000375116|PLA2G2E'] 62457 17076 LLSLDDFNN True H1975_Epitope_Rep2 1049.50293986229 1049.50184993586 70.949 2 -1.966535839619634 0.4452681456895799 1.0 ['HGSNAT-AGPAT6|1|fusion', 'nc|ENSG00000165102|Q68CP4|HGSNAT', 'ENSG00000165102|ENST00000379644|HGSNAT'] 30485 12982 GAGPPNPA True H1975_Epitope_Rep1 679.32893868195 679.3283949679301 55.014 1 -1.9666978059210285 0.44529117627792214 1.0 ['nc|ENSG00000160691|P29353-5|SHC1', 'nc|ENSG00000160691|P29353-3|SHC1', 'nc|ENSG00000160691|P29353-2|SHC1', 'nc|ENSG00000160691|P29353-7|SHC1', 'nc|ENSG00000160691|P29353|SHC1', 'ENSG00000160691|ENST00000448116|SHC1'] 127674 22009 VRFLSGRA True PC9_epitope_Rep6 904.5242844435598 904.52318993586 97.58 2 -1.9666979448747697 0.44529117627792214 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2', 'nc|ENSG00000189350|Q6ZUX3-3|TOGARAM2', 'ENST00000475900.1_1_2:29256310-29268401:+|nuORF'] 124149 25594 VKVPQLAL True PC9_epitope_Rep2 866.5589386167799 866.5583949679301 104.13 1 -1.9667198244586483 0.44529723238168023 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 69009 9042 LVHDHQAY True PC9_epitope_Rep4 981.4668291370899 981.4657299358599 42.353 2 -1.9668156815242523 0.4452996211749037 1.0 ['ENSG00000156381|ENST00000286918|ANKRD9'] 124147 25782 VKVPQLAL True PC9_epitope_Rep1 866.5589386167799 866.5583949679301 104.24 1 -1.9668412778390107 0.4452996211749037 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 71367 6886 MIAWLPDWLWK True NCI_RA007_Epitope_Rep2 1457.75296404905 1457.7518699358602 31.402 2 -1.9669552594029083 0.4452996211749037 1.0 ['ENST00000371221.3_1_10:97392751-97393321:-|nuORF'] 124150 24594 VKVPQLAL True PC9_epitope_Rep4 866.5589386167799 866.5583949679301 103.09 1 -1.9670053493113961 0.4452996211749037 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 93118 21900 RRRRAVPA True PC9_epitope_Rep4 980.6104141093598 980.60930993586 92.449 2 -1.9671465338114809 0.44532751091703054 1.0 ['ENSG00000115275|ENST00000448666|MOGS'] 81825 22589 PSGHTTGH True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 93.325 2 -1.9672807242214159 0.44534448313883035 1.0 ['ENSG00000147206|ENST00000395065|NXF3', 'NXF3|p.S358Wfs*8|1|0.5|ENSG00000147206|chrX:103079849-103079850|AG/-|frameshift_variant'] 63498 22884 LPISGHPT True NCI_RA007_Epitope_Rep3 820.44430278736 820.44320993586 99.461 2 -1.9674122328811856 0.44535659312467935 1.0 ['ENST00000497655.1_1_1:202932056-202932895:-|nuORF'] 30373 19050 GAEPTIRNTD True PC9_epitope_Rep1 1072.51490152832 1072.51380993586 78.067 2 -1.967592975748148 0.44535659312467935 1.0 ['ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion', 'ENSG00000107854|ENST00000371627|TNKS2'] 52542 18872 KPRLEHQKK True NCI_RA007_Epitope_Rep5 1162.69347502698 1162.69297496793 79.435 1 -1.967812281635111 0.44537475711197955 1.0 ['ENSG00000255150|ENST00000527879|EID3'] 113061 12670 TPVSLPPPCP True NCI_RA007_Epitope_Rep4 1006.51575347546 1006.51464993586 55.774 2 -1.9678918838233839 0.44537475711197955 1.0 ['ENST00000487620.1_1_7:99668768-99673049:-|nuORF'] 109108 5982 TFGGLGSL True PC9_epitope_Rep6 750.39120458534 750.39010993586 31.325 2 -1.9679035301392984 0.44537475711197955 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 6176 8471 APPPQGLRAS True PC9_epitope_Rep1 992.5403284305199 992.53922993586 37.419 2 -1.9680180994109864 0.44538081151003744 1.0 ['ENST00000494448.5_1_11:62379695-62379848:-|nuORF'] 76882 24820 NVISTPVR True H1975_Epitope_Rep2 884.50796567308 884.50686993586 102.04 2 -1.9685109638411786 0.4454038358676549 1.0 ['ENSG00000075643|ENST00000261326|MOCOS'] 24511 8100 FAIYGGVSG True PC9_epitope_Rep4 869.4283183700499 869.4272299358599 38.61 2 -1.9687236882197383 0.4454038358676549 1.0 ['nc|ENSG00000106105|P41250-2|GARS1', 'ENSG00000106105|ENST00000389266|GARS1', 'ENST00000478124.5_1_7:30634537-30662079:+|nuORF'] 43858 22131 ILCYLLLVRF True PC9_epitope_Rep6 1251.7413367361899 1251.74022993586 98.068 2 -1.968782926195409 0.44540988975002727 1.0 ['ENSG00000182631|ENST00000330120|RXFP3'] 121745 12918 VGLSVGQMH True PC9_epitope_Rep5 926.46438660894 926.46328993586 54.7 2 -1.9692300764579662 0.4454304332165428 1.0 ['ADGRG3|p.G313Vfs*7|1|0.55|ENSG00000182885|chr16:57683986-57683986|G/-|frameshift_variant', 'ENSG00000182885|ENST00000333493|ADGRG3'] 61806 12037 LLKQSSYC True NCI_RA007_Epitope_Rep3 940.46880328304 940.46770993586 54.472 2 -1.9693132910049944 0.4454304332165428 1.0 ['GUCY1A1|p.H175Y|1|0.29|ENSG00000164116|chr4:155710688-155710688|C/T|missense_variant'] 13503 19811 DPFCCEVI True NCI_RA007_Epitope_Rep5 924.3721260168799 924.37102993586 83.113 2 -1.9693326721446516 0.4454304332165428 1.0 ['INSL4|p.D131H|1|0.24|ENSG00000120211|chr9:5233848-5233848|G/C|missense_variant', 'ENSG00000120211|ENST00000239316|INSL4'] 62645 4402 LLVSAPAP True PC9_epitope_Rep4 766.45889022234 766.45778993586 23.379 2 -1.9694130003720138 0.4454304332165428 1.0 ['ENSG00000204396|ENST00000375688|VWA7', 'nc|ENSG00000204396|Q9Y334-2|VWA7'] 16446 11918 EELNRRYH True NCI_RA007_Epitope_Rep1 1115.54720471611 1115.5461099358602 50.342 2 -1.969420502868366 0.4454304332165428 1.0 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 112802 6067 TPLSAAAHTH True PC9_epitope_Rep1 1004.5039429218 1004.50284993586 28.15 2 -1.9694564524076965 0.4454304332165428 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 18002 9344 EIHRELRPQG True PC9_epitope_Rep1 1233.65781779425 1233.65672993586 40.799 2 -1.9694817040516464 0.4454304332165428 1.0 ['ENSG00000142684|ENST00000374266|ZNF593'] 82907 16237 PWAGLEKH True NCI_RA007_Epitope_Rep3 936.48175092524 936.48064993586 71.557 2 -1.9698809493949831 0.44545831605143094 1.0 ['LTR2752_dup21|chr2:81481148-81482372:-|1.992639235350852|0.0780133736102343|4.67|458.0|40|1|anti-sense'] 86671 5860 QRHYHPHWHFW True H1975_Epitope_Rep1 1629.7490328404901 1629.7479299358602 27.61 2 -1.9699441869762861 0.44546059739607774 1.0 ['ENST00000331803.8_1_7:48142961-48146533:+|nuORF'] 73586 23455 NGEAFKHF True PC9_epitope_Rep4 948.4453654165198 948.44426993586 98.506 2 -1.9700021846869615 0.44546059739607774 1.0 ['ENST00000370713.5_1_1:82445581-82445626:+|nuORF'] 94248 24364 RWRLPLTCLLL True PC9_epitope_Rep2 1382.82204666838 1382.8204049037902 99.281 3 -1.9701442095644763 0.44546059739607774 1.0 ['ENSG00000140519|ENST00000268122|RHCG'] 36863 23741 GVQAPDWD True H1975_Epitope_Rep1 886.38209645362 886.38154496793 98.563 1 -1.97016268831855 0.44546059739607774 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 124146 25076 VKVPQLAL True NCI_RA007_Epitope_Rep5 866.5589386167799 866.5583949679301 103.96 1 -1.970183484679557 0.44546059739607774 1.0 ['ENSG00000175928|ENST00000319331|LRRN1'] 81593 21436 PRLPRSTT True PC9_epitope_Rep6 926.5297637468201 926.52866993586 95.328 2 -1.9703540379508822 0.44546059739607774 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 38995 24151 HKEEWIRW True PC9_epitope_Rep3 1182.5934266325398 1182.59179490379 98.184 3 -1.970426040319788 0.44546059739607774 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 52447 16526 KPGWKKKLRC True H1975_Epitope_Rep2 1242.7383170444198 1242.73666490379 68.79 3 -1.970606147145531 0.44546059739607774 1.0 ['ENST00000569426.1_1_16:89790014-89799821:+|nuORF', 'ENST00000563541.1_1_16:89789946-89799821:+|nuORF', 'ENST00000561536.5_1_16:89789452-89804651:+|nuORF', 'nc|ENSG00000158805|Q8N554-2|ZNF276', 'ENSG00000158805|ENST00000443381|ZNF276'] 34420 22897 GPWQGGRR True H1975_Epitope_Rep2 912.4678321965998 912.46672993586 94.518 2 -1.9706739446536028 0.44546059739607774 1.0 ['ENSG00000171388|ENST00000429967|APLN'] 44263 8465 ILVDLAVS True H1975_Epitope_Rep3 828.49566965388 828.49456993586 37.545 2 -1.9706889371074323 0.44546059739607774 1.0 ['nc|ENSG00000056998|O15488-6|GYG2'] 1599 21052 AEFLVKSK True NCI_RA007_Epitope_Rep4 920.53311779176 920.53202993586 91.264 2 -1.970802909112837 0.44546059739607774 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 122630 5708 VGTMNIFVYW True NCI_RA007_Epitope_Rep5 1228.5950664253198 1228.59396993586 28.643 2 -1.9708449421752556 0.44546059739607774 1.0 ['ENST00000599510.1_1_19:49299609-49300643:-|nuORF', 'nc|ENSG00000105552|O15382-2|BCAT2', 'ENSG00000105552|ENST00000316273|BCAT2'] 47864 13370 IYTMIYRNLVV True H1975_Epitope_Rep1 1383.75844335231 1383.75734993586 56.538 2 -1.970854011261508 0.44546059739607774 1.0 ['MDM2-NUP107|1|fusion', 'MDM2|p.H134Qfs*73|1|0.37|ENSG00000135679|chr12:68824406-68824409|CCTT/-|frameshift_variant', 'MDM2-NUP107|3|fusion', 'nc|ENSG00000135679|Q00987-10|MDM2', 'nc|ENSG00000135679|Q00987|MDM2', 'ENSG00000135679|ENST00000258149|MDM2', 'nc|ENSG00000135679|Q00987-9|MDM2', 'nc|ENSG00000135679|Q00987-8|MDM2'] 93602 25478 RSYKQKKK True PC9_epitope_Rep2 1064.6454622054 1064.6443699358601 103.68 2 -1.970876827615952 0.44546168787237295 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 90655 23577 RKKRRRSQRR True H1975_Epitope_Rep2 1425.8977627628499 1425.89611490379 97.178 3 -1.9708904910775613 0.44546168787237295 1.0 ['ENSG00000186854|ENST00000409520|TRABD2A', 'nc|ENSG00000186854|Q86V40-2|TRABD2A'] 30455 13301 GAGGAGAP True PC9_epitope_Rep1 556.2605247689601 556.25997496793 56.026 1 -1.9709351913572752 0.44546168787237295 1.0 ['nc|ENSG00000055118|Q12809-5|KCNH2', 'ENSG00000055118|ENST00000262186|KCNH2', 'ENSG00000066583|ENST00000173527|ISOC1', 'nc|ENSG00000055118|Q12809-7|KCNH2'] 20608 9077 EQERQQEEQER True NCI_RA007_Epitope_Rep2 1487.6600621918699 1487.6589699358601 39.912 2 -1.9711724079416038 0.44546168787237295 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4', 'ENST00000515341.6_1_15:85055093-85055729:-|nuORF'] 68393 22459 LTSTMLLKV True PC9_epitope_Rep3 1004.5940037961599 1004.59290993586 91.666 2 -1.9711920459008305 0.44546168787237295 1.0 ['ENST00000562867.5_1_16:28837684-28837723:+|nuORF'] 26352 14323 FIFYTDLRKNE True NCI_RA007_Epitope_Rep5 1444.7350650554397 1444.7339699358602 61.785 2 -1.9713801242434257 0.44546168787237295 1.0 ['ENST00000519524.1_1_8:42213005-42218898:+|nuORF'] 100806 25435 SLRSWRRRD True PC9_epitope_Rep2 1230.66938553746 1230.66828993586 103.52 2 -1.971455836417629 0.44546168787237295 1.0 ['ENST00000442035.5_1_X:47053355-47057738:+|nuORF'] 87308 22239 QSVKTSAL True PC9_epitope_Rep4 832.4654321547599 832.46432993586 93.78 2 -1.9714748591558133 0.44546168787237295 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 66019 17608 LSMKLLAYA True NCI_RA007_Epitope_Rep4 1008.5677890483199 1008.5672749679301 76.179 1 -1.9714777616556511 0.44546168787237295 1.0 ['ENSG00000120137|ENST00000239231|PANK3'] 90709 24795 RKNIDIWRKH True NCI_RA007_Epitope_Rep1 1364.77893598644 1364.7778299358602 102.65 2 -1.9715795877736513 0.44546168787237295 1.0 ['ENSG00000120658|ENST00000690772|ENOX1', 'nc|ENSG00000120658|Q8TC92-2|ENOX1'] 84902 21207 QHSLGPPW True PC9_epitope_Rep6 920.4504507969599 920.44934993586 94.421 2 -1.9715844264454014 0.44546168787237295 1.0 ['ENST00000448927.1_1_21:45751689-45751905:+|nuORF'] 71477 16131 MKKFFTAA True NCI_RA007_Epitope_Rep3 942.4997094884998 942.49860993586 71.152 2 -1.9720470661727287 0.44549561346078304 1.0 ['PLA2G2F|p.V50A|2|0.08|ENSG00000158786|chr1:20140198-20140198|T/C|missense_variant'] 138128 24698 YQKRWVRL True PC9_epitope_Rep2 1147.66144662271 1147.66034993586 100.68 2 -1.972148111659104 0.44549561346078304 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1'] 49000 21759 KFGRRHVRWW True PC9_epitope_Rep6 1426.78469007322 1426.7835899358602 96.588 2 -1.9722378373838663 0.44549669957994653 1.0 ['ENST00000542104.5_2_12:65089076-65089520:+|nuORF'] 52954 24088 KRLNIQKRRKP True H1975_Epitope_Rep3 1435.9211835460296 1435.92008993586 100.37 2 -1.972531211143164 0.44549669957994653 1.0 ['ENSG00000107104|ENST00000382297|KANK1', 'ENST00000354485.5_1_9:676972-730286:+|nuORF', 'ENST00000489369.5_1_9:676972-732786:+|nuORF'] 93102 23886 RRRNHAAKR True PC9_epitope_Rep2 1163.68603866111 1163.68494993586 97.356 2 -1.9725371134900294 0.44549669957994653 1.0 ['ENST00000360150.8_1_12:29493870-29493933:-|nuORF'] 119468 5671 VEPWDPRWQDS True H1975_Epitope_Rep3 1413.6313282628898 1413.6302299358601 26.844 2 -1.9725909484319544 0.44549669957994653 1.0 ['ENST00000607166.1_1_10:31607104-31607347:-|nuORF'] 22590 18006 ETPLLKNDP True PC9_epitope_Rep2 1025.53932537101 1025.53822993586 74.564 2 -1.9727335484917319 0.44549669957994653 1.0 ['ENSG00000221843|ENST00000447166|C2orf16'] 30508 5667 GAHGGGAF True H1975_Epitope_Rep3 672.2979729068401 672.29742496793 26.827 1 -1.972842090813247 0.44549669957994653 1.0 ['ENSG00000168906|ENST00000306434|MAT2A', 'ENST00000485270.5_1_10:82033539-82034994:-|nuORF', 'nc|ENSG00000168906|P31153-2|MAT2A', 'ENSG00000151224|ENST00000372213|MAT1A'] 137452 23704 YLNQVLQILLL True NCI_RA007_Epitope_Rep3 1328.8067734437197 1328.80617496793 102.77 1 -1.9729546945325527 0.44549669957994653 1.0 ['ENST00000580498.5_1_17:57287412-57290261:+|nuORF'] 133871 16523 WMLLKIVQG True NCI_RA007_Epitope_Rep4 1086.6259726307799 1086.62486993586 71.62 2 -1.9730189638288 0.44549669957994653 1.0 ['ENST00000483681.5_2_3:58200080-58200149:-|nuORF'] 117670 16369 VAKEIQAP True PC9_epitope_Rep6 854.4861675993399 854.48506993586 75.348 2 -1.9730409544613376 0.44549669957994653 1.0 ['ENSG00000114767|ENST00000232888|RRP9'] 34993 16363 GRAGALRK True H1975_Epitope_Rep2 827.50896873259 827.50786993586 68.162 2 -1.9731716619803754 0.44549669957994653 1.0 ['ENST00000538079.1_1_12:6887244-6887553:+|nuORF'] 39709 5996 HPVCYRCST True PC9_epitope_Rep1 1064.4531703022399 1064.4520699358602 27.879 2 -1.9732105217257838 0.44549669957994653 1.0 ['nc|ENSG00000167962|Q86UK7-2|ZNF598', 'nc|ENSG00000167962|Q86UK7-3|ZNF598', 'nc|ENSG00000167962|Q86UK7|ZNF598', 'ENSG00000167962|ENST00000562103|ZNF598', 'ZNF598|p.V429Cfs*88|2|0.19|ENSG00000167962|chr16:2000398-2000398|C/-|frameshift_variant', 'ENST00000562988.5_1_16:2052496-2059683:-|nuORF', 'ENST00000565396.5_1_16:2053615-2059683:-|nuORF'] 129280 5582 VTDRDIDRY True H1975_Epitope_Rep2 1151.55710069347 1151.5560099358602 26.476 2 -1.9733579896496998 0.4455087991097243 1.0 ['ENSG00000135476|ENST00000257934|ESPL1', 'nc|ENSG00000135476|Q14674-2|ESPL1'] 501 10679 AAPEEEDE True NCI_RA007_Epitope_Rep4 888.3348714776799 888.33376993586 47.925 2 -1.9734996243979939 0.4455087991097243 1.0 ['ENSG00000185352|ENST00000376705|HS6ST3'] 10599 17640 CRTHQAFMR True H1975_Epitope_Rep2 1148.53315195844 1148.53257496793 73.169 1 -1.9740101960697998 0.44552575879901374 1.0 ['ENSG00000115232|ENST00000397033|ITGA4', 'ENST00000476824.1_1_2:182363351-182392165:+|nuORF'] 68914 17248 LVFEKRWLKER True H1975_Epitope_Rep1 1502.87216766494 1502.87106993586 71.806 2 -1.9740913951410597 0.44554271811824264 1.0 ['ENST00000452015.8_3_14:23767740-23768628:-|nuORF'] 60142 23809 LHWHDRSA True PC9_epitope_Rep2 1020.488961564 1020.48786993586 97.051 2 -1.9744607098380513 0.4455499552704501 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF'] 118187 17252 VAVTRSRK True NCI_RA007_Epitope_Rep5 915.5613982282699 915.56030993586 73.134 2 -1.9745362251054221 0.4455499552704501 1.0 ['ENSG00000182156|ENST00000328313|ENPP7'] 110488 17722 TIPTAMGP True H1975_Epitope_Rep3 786.39457571362 786.39402496793 74.092 1 -1.974545559405903 0.4455499552704501 1.0 ['ENST00000375107.7_1_6:32143725-32143884:-|nuORF'] 66475 5696 LSRSATAAL True NCI_RA007_Epitope_Rep5 888.5028802926399 888.50178993586 28.596 2 -1.97467093680152 0.4455620527142608 1.0 ['ENST00000586076.1_1_17:73872457-73872589:+|nuORF'] 12658 18455 DLELFPSPG True PC9_epitope_Rep3 973.4756624852898 973.47511496793 76.191 1 -1.9748171006594606 0.4455620527142608 1.0 ['nc|ENSG00000134954|P14921-4|ETS1'] 15990 3360 EDYPFLVWRNF True NCI_RA007_Epitope_Rep1 1484.7088503075995 1484.7072149037901 16.96 3 -1.9750425480189264 0.4455704763878738 1.0 ['ENST00000359634.9_1_2:196544929-196545025:+|nuORF'] 74021 13688 NHSCSKSS True NCI_RA007_Epitope_Rep4 848.3446653990801 848.34356993586 59.876 2 -1.9751091538860102 0.4455704763878738 1.0 ['nc|ENSG00000189367|Q6ZU52-2|KIAA0408', 'ENST00000368281.1_1_6:127765256-127771512:-|nuORF', 'ENSG00000189367|ENST00000483725|KIAA0408'] 27551 8796 FPLALAGP True H1975_Epitope_Rep3 784.4483255386399 784.44722993586 38.84 2 -1.9751264696206545 0.4455704763878738 1.0 ['nc|ENSG00000169083|P10275-3|AR', 'nc|ENSG00000169083|P10275-4|AR', 'ENST00000513847.5_1_X:66764886-66909456:+|nuORF', 'ENSG00000169083|ENST00000374690|AR'] 80594 24815 PLPCSHPA True PC9_epitope_Rep3 820.39015903952 820.38906993586 100.83 2 -1.9752952672971205 0.4455704763878738 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 25775 24367 FFSTHGTG True H1975_Epitope_Rep3 852.37661715036 852.37552993586 101.45 2 -1.9753039634606058 0.4455704763878738 1.0 ['ENST00000313732.8_1_16:85008678-85008795:-|nuORF'] 112879 21096 TPPMGDVH True NCI_RA007_Epitope_Rep5 852.37998827864 852.37888993586 88.165 2 -1.9753683873667438 0.44558743318424787 1.0 ['ENSG00000117016|ENST00000372684|RIMS3'] 119139 23576 VEILERRT True PC9_epitope_Rep3 1014.5821932425 1014.58108993586 95.97 2 -1.9755252255993478 0.44560438961067295 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 22046 10069 ESRIKSYSPY True H1975_Epitope_Rep3 1228.60880191316 1228.6077099358602 43.77 2 -1.9757415255569224 0.44562134566716116 1.0 ['ENSG00000150457|ENST00000382592|LATS2'] 5550 10069 ANIGPLLV True PC9_epitope_Rep6 795.48543932335 795.48434993586 49.323 2 -1.9759633762266458 0.4456383013537247 1.0 ['nc|ENSG00000101276|Q9NQ40-2|SLC52A3', 'ENSG00000101276|ENST00000645534|SLC52A3'] 108287 7482 TEAYEKWR True H1975_Epitope_Rep2 1081.5192586327698 1081.5181699358602 33.727 2 -1.9761032273417753 0.44566130351786204 1.0 ['nc|ENSG00000113657|Q14195|DPYSL3', 'DPYSL3|p.A516Qfs*15|1|0.67|ENSG00000113657|chr5:147395638-147395638|G/-|frameshift_variant', 'ENSG00000113657|ENST00000343218|DPYSL3'] 85319 16305 QLALRSWV True PC9_epitope_Rep6 971.55525021867 971.55414993586 75.079 2 -1.976202986354233 0.44566130351786204 1.0 ['OR6X1|p.S145R|1|0.31|ENSG00000221931|chr11:123754084-123754084|G/T|missense_variant'] 108241 17293 TEAKAAAK True NCI_RA007_Epitope_Rep4 788.4392174069199 788.43812993586 74.878 2 -1.9765940246850213 0.44568548958867354 1.0 ['ENST00000568310.1_1_15:55677902-55790527:-|nuORF', 'nc|ENSG00000256061|Q8WXU2-3|DNAAF4', 'nc|ENSG00000256061|Q8WXU2-2|DNAAF4', 'ENST00000565113.5_1_15:55681617-55790527:-|nuORF', 'ENSG00000256061|ENST00000321149|DNAAF4'] 71757 25039 MMVIIHKK True NCI_RA007_Epitope_Rep5 998.5769142633801 998.57580993586 103.81 2 -1.9766016144692882 0.44568548958867354 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 103499 12416 SRCQGASG True NCI_RA007_Epitope_Rep5 764.3235360316799 764.32242993586 54.415 2 -1.9767831842442296 0.44568548958867354 1.0 ['ENSG00000196227|ENST00000360816|FAM217B'] 63359 10316 LPETGQRDP True PC9_epitope_Rep2 1011.4985231881899 1011.4974299358599 45.009 2 -1.9768477653036902 0.44568548958867354 1.0 ['ENST00000515011.5_1_5:58334704-58334812:-|nuORF', 'ENST00000358923.10_1_5:58334704-58335138:-|nuORF'] 81139 16641 PPIMLIGH True NCI_RA007_Epitope_Rep5 876.4891448047999 876.48804993586 70.775 2 -1.9778352874965623 0.4457145350232325 1.0 ['ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 82271 18526 PTMIRAFPAN True PC9_epitope_Rep3 1116.5749996870798 1116.57390993586 76.477 2 -1.9778494346079658 0.4457145350232325 1.0 ['ENSG00000102743|ENST00000338625|SLC25A15'] 77094 25541 NWWNLLILLE True H1975_Epitope_Rep2 1312.71795843932 1312.7168699358601 104.87 2 -1.9778581827973323 0.4457145350232325 1.0 ['ENST00000410047.1_1_7:23164348-23164677:+|nuORF'] 99110 15959 SLAFPEGRI True PC9_epitope_Rep2 988.5341804209198 988.53308993586 66.638 2 -1.9781451145566065 0.44572662623794773 1.0 ['ENST00000284268.6_1_5:14710393-14710471:-|nuORF'] 3050 13002 AFWRQPAGP True NCI_RA007_Epitope_Rep4 1028.5191990631197 1028.5181099358601 57.113 2 -1.978223942564851 0.44572662623794773 1.0 ['nc|ENSG00000129103|Q8NBJ7-3|SUMF2', 'nc|ENSG00000129103|Q8NBJ7-2|SUMF2', 'ENSG00000129103|ENST00000434526|SUMF2'] 24150 21577 EYSVLSKPV True PC9_epitope_Rep5 1020.5491617787198 1020.54806993586 88.037 2 -1.9784323095989005 0.4457653923760702 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant'] 52390 24647 KPGKMFVLR True PC9_epitope_Rep2 1074.6372060208198 1074.63610993586 100.46 2 -1.9786515098214776 0.4457726201902103 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 93739 20073 RTRLRNRRY True H1975_Epitope_Rep2 1289.7541182209297 1289.75302993586 83.191 2 -1.9788240037210196 0.4457726201902103 1.0 ['CCDC97|p.E232Sfs*48|1|0.27|ENSG00000142039|chr19:41319763-41319763|G/-|frameshift_variant', 'ENSG00000142039|ENST00000269967|CCDC97'] 15746 27018 EDEDDDHC True PC9_epitope_Rep2 976.27161959812 976.2705299358599 111.28 2 -1.9788276284839927 0.4457726201902103 1.0 ['USP34|p.G630C|1|0.36|ENSG00000115464|chr2:61348267-61348267|C/A|missense_variant'] 93964 24788 RVLVAEVN True PC9_epitope_Rep3 898.52361573722 898.52250993586 100.72 2 -1.9790362461632398 0.44577866483438583 1.0 ['ENSG00000155561|ENST00000285968|NUP205'] 93847 18152 RVFNRREI True NCI_RA007_Epitope_Rep3 1088.6203100867199 1088.61920993586 79.522 2 -1.979145698985708 0.4457907537271924 1.0 ['ENST00000298130.4_1_14:34903533-34903665:-|nuORF'] 91246 22381 RLSPPNRCSTT True PC9_epitope_Rep6 1230.61390437694 1230.61225490379 99.058 3 -1.9795123517457893 0.4457907537271924 1.0 ['ENST00000486186.1_7:111368332-111379399:-|nuORF'] 33150 23496 GKPSRRPQNKR True PC9_epitope_Rep4 1322.76434855146 1322.7632499358601 98.681 2 -1.9796430483689558 0.44580152671755724 1.0 ['ENST00000539322.5_1_16:19566903-19576184:+|nuORF'] 16986 14983 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 64.3 2 -1.9797004967211669 0.44580152671755724 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 49262 16617 KHDVAHMIV True PC9_epitope_Rep2 1048.54878493924 1048.54768993586 69.161 2 -1.9797478286351102 0.44580152671755724 1.0 ['ENST00000550735.6_1_12:112337947-112339324:+|nuORF'] 104501 13045 SSPPPPPL True H1975_Epitope_Rep3 790.42250471362 790.42140993586 55.418 2 -1.9797758984052443 0.44580152671755724 1.0 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 121396 25225 VGHSAGHP True PC9_epitope_Rep5 760.36163579256 760.36052993586 102.18 2 -1.9798434952578454 0.44580152671755724 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 85448 21334 QLFRTKSKR True PC9_epitope_Rep6 1162.69347502698 1162.69183490379 94.93 3 -1.9800529972125112 0.44580152671755724 1.0 ['ENSG00000171219|ENST00000342711|CDC42BPG'] 126031 8768 VPAPRGVPAS True PC9_epitope_Rep5 949.5345147740899 949.53340993586 38.668 2 -1.9801030691696293 0.44580152671755724 1.0 ['ENST00000352580.7_2_2:87013010-87017728:-|nuORF', 'ENST00000283635.7_2_2:87016528-87018429:-|nuORF'] 117385 24004 VACVDTSS True PC9_epitope_Rep2 780.33236937988 780.33126993586 97.826 2 -1.9801763411549969 0.44580152671755724 1.0 ['OR2F2|p.L187V|1|0.08|ENSG00000221910|chr7:143935791-143935791|C/G|missense_variant'] 118357 7230 VDGGSPSL True PC9_epitope_Rep6 730.34973369618 730.34918496793 36.923 1 -1.980265746162815 0.44580152671755724 1.0 ['ENSG00000158077|ENST00000299481|NLRP14'] 131226 24287 VVPQLKYKV True PC9_epitope_Rep6 1072.6644663144798 1072.6633699358601 107.29 2 -1.980506752941066 0.4458220201293249 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 104278 8683 SSEEDLLVSW True NCI_RA007_Epitope_Rep2 1163.5346339133898 1163.53352993586 38.422 2 -1.9805144414406075 0.4458220201293249 1.0 ['nc|ENSG00000137221|Q5JTD0-4|TJAP1', 'nc|ENSG00000137221|Q5JTD0-2|TJAP1', 'ENSG00000137221|ENST00000372449|TJAP1', 'ENST00000454762.1_1_6:43472456-43473590:+|nuORF'] 59083 11955 LGDSPIDP True H1975_Epitope_Rep3 812.39159850816 812.39105496793 51.141 1 -1.9805614092477142 0.4458220201293249 1.0 ['nc|ENSG00000132170|P37231|PPARG', 'ENST00000477039.5_1_3:12393091-12447643:+|nuORF'] 125415 5078 VLTLDLSQYPD True PC9_epitope_Rep5 1262.6394333351 1262.63779490379 24.557 3 -1.9805873882914866 0.4458220201293249 1.0 ['nc|ENSG00000077935|Q8NDV3-2|SMC1B', 'ENSG00000077935|ENST00000357450|SMC1B'] 131256 7663 VVQDPFQKG True NCI_RA007_Epitope_Rep2 1016.5290950404798 1016.52798993586 34.433 2 -1.9806880630615675 0.4458220201293249 1.0 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-3|MTCL1', 'nc|ENSG00000168502|Q9Y4B5|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-4|MTCL1', 'nc|ENSG00000168502|Q9Y4B5-2|MTCL1'] 90168 12117 RHERIEAPW True PC9_epitope_Rep6 1192.6101393258398 1192.60849490379 57.952 3 -1.9808020756418634 0.4458220201293249 1.0 ['ENSG00000158042|ENST00000288937|MRPL17'] 107845 5592 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 26.337 2 -1.9809790444763844 0.4458220201293249 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 92568 17197 RRASRHIVR True NCI_RA007_Epitope_Rep4 1149.69554071565 1149.6938849037901 74.462 3 -1.9811928666546932 0.4458389671566276 1.0 ['ENST00000263663.9_1_2:9994458-10008411:+|nuORF'] 137397 22037 YLLLCFFS True NCI_RA007_Epitope_Rep3 1004.5041261626001 1004.50302993586 95.74 2 -1.981303379810613 0.44584500975912944 1.0 ['ENST00000584437.5_1_17:56494644-56494767:-|nuORF', 'ENST00000580014.1_1_17:56494486-56494767:-|nuORF'] 55477 14293 LAVGTPRGAL True PC9_epitope_Rep6 953.5658149023699 953.56470993586 66.873 2 -1.9814437403626843 0.44585709456880857 1.0 ['ENST00000586689.5_2_17:74733959-74734425:+|nuORF', 'ENST00000588460.5_1_17:74733800-74734238:+|nuORF'] 49168 21708 KGPARQAK True PC9_epitope_Rep4 854.5086343794198 854.50752993586 91.702 2 -1.9814766494140574 0.44585709456880857 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 71619 17169 MLLLKSLW True NCI_RA007_Epitope_Rep5 1002.59360987334 1002.5930749679301 72.813 1 -1.9818168536610448 0.4458627192360937 1.0 ['ENST00000445193.7_2_3:58303863-58303956:+|nuORF'] 48142 28073 KAQILKRRLVP True H1975_Epitope_Rep3 1320.87177374212 1320.8701349037901 118.8 3 -1.9819097836393462 0.4458627192360937 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 127943 16819 VRPLQQLGQR True NCI_RA007_Epitope_Rep5 1193.69928868341 1193.69818993586 71.441 2 -1.9821470527201661 0.4458627192360937 1.0 ['ENSG00000167434|ENST00000300900|CA4'] 14959 17589 DYQKLNSAM True NCI_RA007_Epitope_Rep5 1068.4909952796 1068.4898899358602 74.437 2 -1.9823783469842862 0.4458627192360937 1.0 ['chr19:32731883-32738856|120|32.03|0.86|5.23|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32802789-32802922|119|10.48|0.41|4.67|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32821139-32826098|136|11.88|0.47|4.66|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32818157-32821033|134|11.27|0.53|4.41|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32815620-32818089|138|12.78|0.49|4.72|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32813776-32815448|146|12.14|0.53|4.52|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32811420-32813684|125|10.81|0.45|4.6|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32807648-32810093|113|10.89|0.34|5.02|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32810277-32811210|133|13.62|0.46|4.89|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32801873-32802656|116|12.07|0.36|5.06|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32800772-32801756|114|12.14|0.37|5.04|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32800358-32800644|102|10.03|0.33|4.91|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32749869-32755992|129|29.96|0.99|4.92|+|ENST00000647536|TDRD12,TDRD12', 'chr19:32748531-32749784|139|36.43|0.97|5.23|+|ENST00000647536|TDRD12,TDRD12', 'ENSG00000173809|ENST00000639142|TDRD12', 'nc|ENSG00000173809|Q587J7|TDRD12', 'chr19:32803142-32807549|109|11.56|0.36|4.99|+|ENST00000444215|TDRD12,TDRD12', 'chr19:32790591-32790674|124|12.03|0.22|5.75|+|ENST00000421545|TDRD12,TDRD12', 'nc|ENSG00000173809|Q587J7-2|TDRD12'] 3372 7435 AGILEVLR True H1975_Epitope_Rep3 869.5334521449299 869.53234993586 33.577 2 -1.982466085110168 0.4458627192360937 1.0 ['ENST00000357496.6_1_3:49114449-49131448:-|nuORF'] 86286 23990 QQDSGGGGGG True H1975_Epitope_Rep1 818.3154734457797 818.3149249679301 99.559 1 -1.982601388937656 0.4458627192360937 1.0 ['nc|ENSG00000136352|P43699|NKX2-1', 'ENSG00000136352|ENST00000354822|NKX2-1'] 134987 23331 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 97.029 2 -1.9826324414433467 0.4458627192360937 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 27156 21394 FLRVRANR True PC9_epitope_Rep6 1030.6148307834599 1030.6137299358602 95.165 2 -1.982690039549948 0.4458627192360937 1.0 ['ENST00000475378.5_1_1:45097966-45116444:+|nuORF', 'nc|ENSG00000187147|Q5VTB9-3|RNF220', 'ENSG00000187147|ENST00000361799|RNF220'] 81932 12978 PSPLSRTD True PC9_epitope_Rep1 871.43994568291 871.4393949679301 54.792 1 -1.9828710842635462 0.4458627192360937 1.0 ['ENST00000356607.8_1_1:10690052-10690751:+|nuORF'] 20085 9312 ENGTRVITEV True H1975_Epitope_Rep2 1116.57750178488 1116.57640993586 40.779 2 -1.9829039904287957 0.4458627192360937 1.0 ['nc|ENSG00000173821|Q63HN8|RNF213', 'ENSG00000173821|ENST00000582970|RNF213', 'nc|ENSG00000173821|Q63HN8-4|RNF213'] 69615 26420 LVTVLQRRRP True H1975_Epitope_Rep2 1236.7778733572798 1236.77623490379 108.75 3 -1.982929894865416 0.4458627192360937 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 125554 15029 VLYCCCLKEI True PC9_epitope_Rep6 1185.55960951673 1185.55850993586 69.836 2 -1.982942978829207 0.4458627192360937 1.0 ['ENSG00000088035|ENST00000263440|ALG6'] 27299 18022 FLYSILIAK True PC9_epitope_Rep2 1066.6426682407398 1066.6415699358602 74.627 2 -1.98296105129771 0.4458627192360937 1.0 ['ENSG00000163328|ENST00000392552|GPR155'] 101191 18470 SLVVAFICKLH True NCI_RA007_Epitope_Rep3 1228.7002002002 1228.6991099358602 80.831 2 -1.9831269895802948 0.4458627192360937 1.0 ['nc|ENSG00000006744|Q9BQ52-2|ELAC2', 'ENST00000484122.5_1_17:12899737-12920449:-|nuORF', 'nc|ENSG00000006744|Q9BQ52-4|ELAC2', 'ENSG00000006744|ENST00000338034|ELAC2', 'ELAC2|p.L399Cfs*49|1|0.22|ENSG00000006744|chr17:13002464-13002464|G/-|frameshift_variant'] 60893 20923 LKRKTSSVS True H1975_Epitope_Rep3 1004.59784330664 1004.59674993586 87.379 2 -1.983136798975429 0.4458627192360937 1.0 ['ENSG00000241973|ENST00000255882|PI4KA', 'ENST00000485963.5_1_22:21152870-21213097:-|nuORF'] 80161 22454 PKTKLLCKHL True PC9_epitope_Rep4 1179.71618461751 1179.71508993586 94.6 2 -1.9831526178077892 0.4458627192360937 1.0 ['ENST00000519187.5_2_8:133771681-133772790:-|nuORF', 'ENST00000519016.5_2_8:133771146-133772850:-|nuORF', 'ENST00000519304.1_2_8:133771146-133772790:-|nuORF'] 134433 26956 WTHGAQGG True H1975_Epitope_Rep1 812.3565504121198 812.35544993586 112.43 2 -1.9832435923231004 0.4458627192360937 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 107629 7607 TAHHISPER True NCI_RA007_Epitope_Rep1 1046.52574099554 1046.52464993586 33.581 2 -1.9832437525199362 0.4458627192360937 1.0 81281 22688 PPPWLPPSFL True PC9_epitope_Rep2 1149.62226714933 1149.62062490379 92.764 3 -1.9832619583266227 0.4458627192360937 1.0 ['ENST00000464333.5_1_22:32012607-32014401:+|nuORF'] 32736 15454 GHVIIGPS True PC9_epitope_Rep1 778.4337381036601 778.43264993586 64.265 2 -1.9833460190724306 0.4458627192360937 1.0 ['ENSG00000173227|ENST00000527043|SYT12'] 8910 22406 AVGHHISE True PC9_epitope_Rep6 848.4140652882401 848.41296993586 99.166 2 -1.983367483941478 0.4458627192360937 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 2547 6301 AEREPDPF True H1975_Epitope_Rep3 959.4348603024698 959.43376993586 29.241 2 -1.9835234006269886 0.4458627192360937 1.0 ['ENSG00000165632|ENST00000344293|TAF3'] 71013 9810 MERDRGAAH True H1975_Epitope_Rep3 1041.4774109041298 1041.4763099358602 42.76 2 -1.9835545234114413 0.4458627192360937 1.0 ['ENSG00000108947|ENST00000226091|EFNB3'] 49204 23573 KGPQRRRW True H1975_Epitope_Rep3 1082.62097879306 1082.61988993586 98.348 2 -1.9836732549238738 0.4458627192360937 1.0 ['ENSG00000106948|ENST00000374088|AKNA', 'AKNA|p.V368*|1|0.39|ENSG00000106948|chr9:114376705-114376705|C/-|frameshift_variant', 'nc|ENSG00000106948|Q7Z591-3|AKNA', 'nc|ENSG00000106948|Q7Z591-6|AKNA'] 80596 22047 PLPCSHPA True PC9_epitope_Rep6 820.39015903952 820.38906993586 97.738 2 -1.983868921890538 0.4458627192360937 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 118004 12673 VASLFNKDD True NCI_RA007_Epitope_Rep5 1007.49237517859 1007.49126993586 55.404 2 -1.9838717900077911 0.4458627192360937 1.0 ['TDRP|p.T49A|1|0.12|ENSG00000180190|chr8:494561-494561|T/C|missense_variant'] 99017 3256 SKPKYYFAWT True PC9_epitope_Rep2 1289.6444591458899 1289.64280490379 17.776 3 -1.9838824884144266 0.4458627192360937 1.0 ['ENSG00000172197|ENST00000324607|MBOAT1', 'nc|ENSG00000172197|Q6ZNC8-2|MBOAT1'] 39801 22510 HQEFSHWL True PC9_epitope_Rep4 1082.4933782381 1082.49228993586 94.816 2 -1.9840302547896047 0.4458627192360937 1.0 ['nc|ENSG00000007202|Q14667-2|BLTP2', 'ENSG00000007202|ENST00000528896|BLTP2', 'ENST00000580882.5_1_17:26966325-26972074:-|nuORF', 'KIAA0100-SEZ6|1|fusion', 'KIAA0100-SEZ6|2|fusion'] 39707 8784 HPVAAPAL True H1975_Epitope_Rep3 774.4388234841 774.43772993586 38.793 2 -1.9840693270890044 0.4458687595378243 1.0 ['ENST00000564629.1_1_16:31469444-31469618:-|nuORF'] 121029 23359 VGFFILLRIF True PC9_epitope_Rep1 1223.74305098835 1223.7424749679299 94.636 1 -1.984136086799176 0.4458856999596691 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'ABCC12|p.H970N|1|0.3|ENSG00000140798|chr16:48101002-48101002|G/T|missense_variant'] 92757 23285 RRKPFPFK True PC9_epitope_Rep4 1074.6450682825798 1074.64396993586 97.82 2 -1.9844185521479898 0.4458880592947845 1.0 ['ENSG00000142623|ENST00000375471|PADI1'] 108390 5747 TEDWKPSKH True H1975_Epitope_Rep3 1126.54072235334 1126.5396299358601 27.132 2 -1.9844452257365033 0.4458880592947845 1.0 ['ENST00000262919.9_1_20:3627575-3627716:+|nuORF'] 90728 24982 RKPKKLQYA True PC9_epitope_Rep5 1130.69241239782 1130.69130993586 101.26 2 -1.9844855608741216 0.4458880592947845 1.0 ['ENSG00000146247|ENST00000275034|PHIP', 'ENST00000479165.1_1_6:79650412-79665440:-|nuORF'] 63633 18330 LPNKDVYK True NCI_RA007_Epitope_Rep4 975.5389314481898 975.53782993586 79.305 2 -1.9845138037730736 0.4458880592947845 1.0 ['RESF1|p.E1724Kfs*23|1|0.2|ENSG00000174718|chr12:31992457-31992457|A/-|frameshift_variant', 'ENSG00000174718|ENST00000312561|RESF1'] 119460 7814 VEPTLHSHR True PC9_epitope_Rep1 1074.55704112382 1074.55594993586 34.881 2 -1.9845861449576443 0.4459049985830445 1.0 ['ENST00000264852.8_2_3:113346645-113347029:+|nuORF'] 82286 23619 PTPHCSHS True H1975_Epitope_Rep2 864.3548361599601 864.35372993586 97.343 2 -1.984737755601815 0.4459061777913415 1.0 ['ENST00000360535.8_1_19:36523251-36523727:-|nuORF'] 82249 24722 PTLCLVAL True NCI_RA007_Epitope_Rep5 828.4779114147599 828.47680993586 102.58 2 -1.984760363465928 0.4459061777913415 1.0 ['ENST00000377298.8_1_1:9790356-9790569:-|nuORF'] 127433 23438 VQRVLKYPL True PC9_epitope_Rep6 1114.6862643882198 1114.6851699358601 103.26 2 -1.9848854922283612 0.4459169327680722 1.0 ['ENSG00000146426|ENST00000682666|TIAM2', 'nc|ENSG00000146426|Q8IVF5-5|TIAM2', 'nc|ENSG00000146426|Q8IVF5-2|TIAM2', 'nc|ENSG00000146426|Q8IVF5-4|TIAM2', 'nc|ENSG00000146426|Q8IVF5-3|TIAM2'] 81321 13419 PPRFTKGL True NCI_RA007_Epitope_Rep2 914.5337864980999 914.53268993586 56.839 2 -1.9849384400300532 0.4459169327680722 1.0 ['PCDH17|p.G757Afs*24|1|0.44|ENSG00000118946|chr13:57634814-57634814|G/-|frameshift_variant', 'nc|ENSG00000118946|O14917-2|PCDH17', 'ENSG00000118946|ENST00000377918|PCDH17'] 87986 23677 QVRGPLHLR True PC9_epitope_Rep1 1074.6410455312998 1074.6399499358602 95.865 2 -1.9850493064689763 0.4459169327680722 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 80591 21451 PLPCSHPA True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 89.574 2 -1.9855656946066222 0.4459169327680722 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 116623 16632 TYHMWWVCFWH True H1975_Epitope_Rep2 1594.66383177482 1594.6627299358602 69.206 2 -1.9856207037329245 0.4459169327680722 1.0 ['ENST00000523237.1_1_8:1721944-1728730:+|nuORF', 'ENSG00000182372|ENST00000331222|CLN8'] 110469 6627 TIPGHLNS True PC9_epitope_Rep4 837.4344663796501 837.43336993586 32.651 2 -1.9857703155482793 0.4459169327680722 1.0 ['ENSG00000115414|ENST00000354785|FN1', 'nc|ENSG00000115414|P02751-7|FN1', 'nc|ENSG00000115414|P02751-11|FN1', 'nc|ENSG00000115414|P02751-13|FN1', 'nc|ENSG00000115414|P02751-1|FN1', 'nc|ENSG00000115414|P02751-3|FN1', 'nc|ENSG00000115414|P02751-4|FN1', 'nc|ENSG00000115414|P02751-17|FN1', 'nc|ENSG00000115414|P02751-6|FN1', 'nc|ENSG00000115414|P02751-5|FN1', 'nc|ENSG00000115414|P02751-8|FN1', 'nc|ENSG00000115414|P02751-9|FN1', 'nc|ENSG00000115414|P02751-14|FN1', 'nc|ENSG00000115414|P02751-10|FN1', 'nc|ENSG00000115414|P02751-12|FN1', 'FN1-PECR|2|fusion', 'FN1-PECR|1|fusion', 'FN1-PECR|3|fusion'] 129948 7876 VTNELRVFH True H1975_Epitope_Rep3 1113.59309227937 1113.59198993586 35.271 2 -1.9859794178733792 0.4459169327680722 1.0 ['ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'nc|ENSG00000088812|O75882-3|ATRN', 'ATRN-TNKS2|2|fusion', 'ATRN-TNKS2|1|fusion'] 7799 24558 ASYFTSCG True PC9_epitope_Rep1 834.3218046961799 834.32070993586 99.323 2 -1.9860382331525188 0.4459169327680722 1.0 ['ENST00000464265.5_1_21:38441882-38444742:-|nuORF'] 89954 23390 RFYYVDHN True NCI_RA007_Epitope_Rep3 1112.5039429217998 1112.50284993586 101.55 2 -1.9861184277644666 0.4459169327680722 1.0 ['nc|ENSG00000198373|O00308-2|WWP2', 'ENSG00000198373|ENST00000359154|WWP2'] 108689 25132 TELTGLKK True NCI_RA007_Epitope_Rep1 888.5280324113199 888.52692993586 104.0 2 -1.9865507543989045 0.44596170402903257 1.0 ['ENSG00000189186|ENST00000451261|DCAF8L2'] 109561 21911 THASKHVN True PC9_epitope_Rep3 892.4515134261201 892.45040993586 89.581 2 -1.986551446976691 0.44596170402903257 1.0 ['ASAH2|p.T447Hfs*88|1|0.15|ENSG00000188611|chr10:50210898-50210898|T/-|frameshift_variant'] 112530 19112 TPAFDKPK True H1975_Epitope_Rep1 902.4861675993399 902.48506993586 79.651 2 -1.986816268513189 0.44597863993025283 1.0 ['ENSG00000196839|ENST00000372874|ADA', 'ENST00000545776.5_1_20:43255095-43280248:-|nuORF', 'ENST00000492931.5_1_20:43251503-43280248:-|nuORF'] 15652 23934 ECAWGCRG True H1975_Epitope_Rep2 880.3319925403998 880.33088993586 98.579 2 -1.986967841882643 0.44599675250373244 1.0 ['ENSG00000215474|ENST00000425639|SKOR2', 'nc|ENSG00000215474|Q2VWA4-2|SKOR2'] 72971 3812 NCPSFALH True PC9_epitope_Rep5 887.3959726959499 887.39486993586 19.746 2 -1.986970860354867 0.44599675250373244 1.0 ['ENST00000601957.5_1_19:35433558-35435739:+|nuORF', 'ENSG00000168661|ENST00000601142|ZNF30', 'nc|ENSG00000168661|P17039-2|ZNF30'] 39559 22031 HPHIITLI True PC9_epitope_Rep4 942.5650866263801 942.56398993586 92.963 2 -1.9870076028911685 0.44599675250373244 1.0 ['nc|ENSG00000156873|P15735-2|PHKG2', 'ENSG00000156873|ENST00000563588|PHKG2'] 68530 15380 LTVTSASW True PC9_epitope_Rep2 863.43888305375 863.43833496793 64.441 1 -1.9872844717888107 0.44602458480449847 1.0 ['ENST00000380956.8_1_6:407613-407766:+|nuORF'] 18721 14298 ELDILLQW True H1975_Epitope_Rep3 1028.55424715916 1028.5531499358601 60.34 2 -1.9873211144224154 0.4460306216967253 1.0 ['nc|ENSG00000162891|Q9NYY1-2|IL20', 'ENSG00000162891|ENST00000367098|IL20'] 48121 28558 KAQILKRRLVP True H1975_Epitope_Rep2 1320.87177374212 1320.8701349037901 119.63 3 -1.9874232336131605 0.44604873158399444 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 32441 8485 GGHGFPGP True H1975_Epitope_Rep3 724.3292730351199 724.32872496793 37.623 1 -1.9874810312546483 0.44604873158399444 1.0 ['nc|ENSG00000126456|Q14653-4|IRF3'] 52388 23082 KPGKMFVLR True PC9_epitope_Rep2 1074.6372060208198 1074.63610993586 94.276 2 -1.987509703338112 0.44604873158399444 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 57842 5609 LEQAVLPA True NCI_RA007_Epitope_Rep2 839.4752685624699 839.47416993586 26.434 2 -1.9881510837764973 0.4461419433577788 1.0 ['nc|ENSG00000060237|Q9H4A3-2|WNK1', 'ENSG00000060237|ENST00000315939|WNK1', 'nc|ENSG00000060237|Q9H4A3-5|WNK1', 'nc|ENSG00000060237|Q9H4A3-6|WNK1', 'nc|ENSG00000060237|Q9H4A3-7|WNK1', 'nc|ENSG00000060237|Q9H4A3-4|WNK1'] 84381 12085 QGAVGPEV True PC9_epitope_Rep4 755.38136817763 755.3808149679301 54.289 1 -1.988349654975852 0.4461588754494933 1.0 ['ENSG00000172985|ENST00000309415|SH3RF3'] 113960 19341 TRKGAGGK True PC9_epitope_Rep3 773.4507851501298 773.44968993586 79.616 2 -1.9884093521336443 0.4461600488166325 1.0 ['ENSG00000165801|ENST00000298694|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-4|ARHGEF40', 'nc|ENSG00000165801|Q8TER5-3|ARHGEF40', 'ARHGEF40|p.A737Pfs*3|1|0.38|ENSG00000165801|chr14:21078445-21078445|G/-|frameshift_variant'] 117567 12679 VAGGSKHG True H1975_Epitope_Rep1 711.36638681983 711.36583496793 53.825 1 -1.988441074199601 0.4461600488166325 1.0 ['ENSG00000141279|ENST00000322157|NPEPPS', 'nc|ENSG00000141279|P55786-2|NPEPPS', 'ENST00000531486.1_1_17:45681241-45696545:+|nuORF', 'ENST00000530514.5_1_17:45668242-45699283:+|nuORF'] 120344 13048 VFPNLRVA True PC9_epitope_Rep4 914.5337864980999 914.53268993586 58.082 2 -1.9885377975379368 0.44616122213263015 1.0 ['ENST00000301732.9_1_16:2379695-2379815:-|nuORF'] 79698 22380 PHNPAVRT True PC9_epitope_Rep5 890.4722488707 890.47114993586 91.097 2 -1.98855048561517 0.44616122213263015 1.0 ['ENST00000478770.6_1_1:2113296-2116445:+|nuORF'] 23157 10089 EVNRNSYLA True NCI_RA007_Epitope_Rep1 1064.5250722892 1064.5239699358601 43.253 2 -1.9886939438463038 0.4461890493053664 1.0 ['ENSG00000168411|ENST00000361070|RFWD3'] 64849 23199 LSALWGMK True PC9_epitope_Rep1 904.48405942436 904.4835149679301 94.032 1 -1.988747927389199 0.4461950836820084 1.0 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-3|DCAF1'] 85250 23443 QKLNYMLLAK True PC9_epitope_Rep2 1220.6951148197597 1220.69400993586 95.645 2 -1.9891652084233584 0.44622290987938157 1.0 ['AIM2|p.F268Lfs*2|1|0.15|ENSG00000163568|chr1:159065922-159065922|A/-|frameshift_variant', 'ENSG00000163568|ENST00000368130|AIM2'] 82694 24552 PVPDAICC True PC9_epitope_Rep1 816.3509966494801 816.34988993586 99.299 2 -1.9892115914144457 0.4462349775002996 1.0 ['nc|ENSG00000182670|P53804-3|TTC3', 'nc|ENSG00000182670|P53804-2|TTC3', 'ENSG00000182670|ENST00000418766|TTC3', 'TTC3|p.E1565Kfs*6|1|0.26|ENSG00000182670|chr21:37182841-37182841|A/-|frameshift_variant', 'ENST00000399586.2_1_X:74960734-74966719:-|nuORF'] 32482 24089 GGKYKTRLKQL True NCI_RA007_Epitope_Rep2 1290.77720465094 1290.7761099358602 101.2 2 -1.9892116183659747 0.4462349775002996 1.0 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1', 'nc|ENSG00000139697|A3KN83-4|SBNO1'] 24809 20929 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 87.504 2 -1.9893877880914415 0.4462628023534539 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 134080 25610 WQQRKPKG True PC9_epitope_Rep1 1026.5722972651397 1026.57120993586 103.53 2 -1.9894822306183118 0.4462639733281035 1.0 ['ENSG00000205810|ENST00000396439|KLRC3', 'nc|ENSG00000205810|Q07444-2|KLRC3'] 108864 17898 TERLARIR True NCI_RA007_Epitope_Rep5 1013.6094110498499 1013.60830993586 75.638 2 -1.9896255785952444 0.4462639733281035 1.0 ['nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 32372 21175 GGEQPPPGAK True NCI_RA007_Epitope_Rep5 936.4664947839199 936.46538993586 88.481 2 -1.9896882257968211 0.4462760393968448 1.0 ['ENSG00000146826|ENST00000316937|TRAPPC14', 'ENST00000419037.5_1_7:99753435-99755466:-|nuORF', 'ENST00000498638.1_1_7:99753991-99754759:-|nuORF'] 2989 8745 AFLWIQRELRR True PC9_epitope_Rep1 1486.8521009267 1486.85100993586 38.476 2 -1.9897066845019746 0.4462760393968448 1.0 ['ENST00000494154.6_1_3:40523714-40523816:+|nuORF'] 36896 13391 GVQQQRPP True PC9_epitope_Rep1 908.4828135543999 908.48170993586 56.368 2 -1.9898091775012192 0.446277210032031 1.0 ['ENST00000582620.5_1_18:72167208-72179735:+|nuORF', 'ENST00000584581.5_1_18:72178181-72179738:+|nuORF'] 38998 22424 HKEEWIRW True PC9_epitope_Rep6 1182.5934266325398 1182.59179490379 99.246 3 -1.9900925311980386 0.446277210032031 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 32160 22639 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 94.263 2 -1.9906541253339953 0.4462807216315147 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 139887 15429 YVDVPMTSQQ True H1975_Epitope_Rep1 1166.52777471114 1166.5266699358601 64.618 2 -1.990815112103416 0.4462807216315147 1.0 ['ENSG00000248713|ENST00000511828|C4orf54'] 85506 6732 QLITGTEPDTI True NCI_RA007_Epitope_Rep1 1186.60813320682 1186.60702993586 30.196 2 -1.9908577952774338 0.4462807216315147 1.0 ['nc|ENSG00000266200|P54317|PNLIPRP2'] 97226 19529 SFLHVYHH True PC9_epitope_Rep4 1038.5035489989802 1038.50297496793 83.239 1 -1.9909262558585152 0.4462807216315147 1.0 ['ENSG00000118402|ENST00000369816|ELOVL4'] 87309 21041 QSVKTSAL True PC9_epitope_Rep6 832.4654321547599 832.46432993586 93.754 2 -1.9909309099011667 0.4462807216315147 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 43781 22435 IKAPAVAFWR True PC9_epitope_Rep4 1157.67094867725 1157.6698499358602 94.529 2 -1.9910890393734242 0.4462807216315147 1.0 ['ENST00000479887.1_1_7:143949295-143949613:-|nuORF'] 122917 17977 VGVSVLLA True H1975_Epitope_Rep3 756.4745402864799 756.47344993586 75.3 2 -1.991226016531496 0.44628909441485015 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'TENM3|p.A314G|1|0.48|ENSG00000218336|chr4:182628842-182628842|C/G|missense_variant'] 126556 14889 VPPHGPAS True NCI_RA007_Epitope_Rep5 760.38678791124 760.38623496793 63.94 1 -1.9913021049745985 0.44628909441485015 1.0 ['nc|ENSG00000132970|Q9UPY6-2|WASF3', 'ENSG00000132970|ENST00000335327|WASF3', 'WASF3|p.P307Rfs*28|1|0.24|ENSG00000132970|chr13:26681250-26681250|C/-|frameshift_variant', 'ENST00000489446.1_1_2:23755466-23866061:+|nuORF'] 76001 1566 NRIRSLLYC True PC9_epitope_Rep3 1136.6124478249599 1136.61134993586 8.623 2 -1.9913026514982408 0.44628909441485015 1.0 ['BRINP2|p.Q422R|1|0.32|ENSG00000198797|chr1:177280441-177280441|A/G|missense_variant'] 90010 23482 RGDQGIES True H1975_Epitope_Rep3 860.3988091469199 860.39770993586 97.992 2 -1.9913103762602378 0.44628909441485015 1.0 ['nc|ENSG00000196182|Q8N2I9-3|STK40', 'ENSG00000196182|ENST00000373132|STK40', 'nc|ENSG00000196182|Q8N2I9-4|STK40'] 121380 21050 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 87.978 2 -1.9913202248462403 0.44628909441485015 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 60933 3082 LKYLKWIQNYF True NCI_RA007_Epitope_Rep2 1514.82857151746 1514.82691490379 16.601 3 -1.9913889717977484 0.4463338380592381 1.0 ['ENST00000315554.12_3_1:22379221-22404982:+|nuORF', 'ENST00000344548.7_3_1:22379221-22404982:+|nuORF'] 111989 11254 TLSNLLRSV True PC9_epitope_Rep4 1001.58694426977 1001.58584993586 51.062 2 -1.9914055509715423 0.4463338380592381 1.0 ['nc|ENSG00000105486|P18858-2|LIG1', 'nc|ENSG00000105486|P18858-3|LIG1', 'ENSG00000105486|ENST00000263274|LIG1'] 124478 23293 VLFASSHT True NCI_RA007_Epitope_Rep3 860.43921740692 860.43812993586 101.17 2 -1.991712526960414 0.4463943355119826 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 122253 21021 VGRRAAKA True PC9_epitope_Rep4 827.5089687325898 827.5084249679301 89.019 1 -1.9918493616330382 0.446403868986025 1.0 ['nc|ENSG00000177138|Q8IZU0-2|FAM9B'] 38392 16023 HGGPGAWE True PC9_epitope_Rep2 809.34565137525 809.34454993586 66.886 2 -1.991888807164727 0.446403868986025 1.0 ['nc|ENSG00000187642|Q5SV97-3|PERM1', 'ENSG00000187642|ENST00000433179|PERM1'] 60451 14839 LILGTLESGH True PC9_epitope_Rep1 1038.57095985246 1038.5703749679299 61.897 1 -1.9919699801741 0.446403868986025 1.0 ['nc|ENSG00000105366|Q9NYZ4-3|SIGLEC8', 'ENSG00000105366|ENST00000321424|SIGLEC8'] 85798 11130 QLWWRNWFWVH True H1975_Epitope_Rep1 1656.8102361147198 1656.80912993586 47.779 2 -1.991982162910124 0.446403868986025 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 93531 18823 RSPDRGLDR True PC9_epitope_Rep4 1070.5581037529798 1070.5570099358602 80.488 2 -1.9919846494747553 0.446403868986025 1.0 ['ACTR2-TSGA10|1|fusion', 'ENSG00000135951|ENST00000393483|TSGA10'] 93965 21039 RVLWVRRER True PC9_epitope_Rep6 1268.75780661904 1268.75670993586 93.747 2 -1.992060182441258 0.446403868986025 1.0 ['ENST00000503969.5_1_5:76414257-76443501:+|nuORF'] 117353 16777 VAARSVPR True H1975_Epitope_Rep3 854.50863437942 854.50752993586 70.079 2 -1.9921561097166824 0.446403868986025 1.0 ['ENST00000418460.2_1_1:232941107-232941410:+|nuORF'] 24814 22906 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 95.33 2 -1.992294748805766 0.4464050365432583 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 66385 23130 LSRDEILRY True PC9_epitope_Rep1 1163.62987171091 1163.62822490379 93.763 3 -1.9923427735535637 0.4464050365432583 1.0 ['ENSG00000124217|ENST00000244051|MOCS3'] 129996 14373 VTPKDQGY True PC9_epitope_Rep5 906.4446967101799 906.44358993586 60.285 2 -1.9926685098881478 0.44644490916220103 1.0 ['ENSG00000152580|ENST00000282466|IGSF10'] 92004 21981 RPRPRRYVE True NCI_RA007_Epitope_Rep4 1227.6948720093098 1227.69322490379 95.317 3 -1.9927183929891943 0.44644490916220103 1.0 ['nc|ENSG00000189064|Q9UEU5|GAGE2D', 'nc|ENSG00000189064|Q13066|GAGE2B', 'ENSG00000215274|ENST00000407599|GAGE10', 'ENSG00000189064|ENST00000362097|GAGE2A'] 3040 16936 AFVKKGMP True NCI_RA007_Epitope_Rep2 876.4891448047998 876.48859496793 70.615 1 -1.9927197441640883 0.44644490916220103 1.0 ['ENST00000344204.8_1_5:14387586-14387625:+|nuORF'] 94326 9729 RWWFRRLFLIF True NCI_RA007_Epitope_Rep1 1638.9299573245796 1638.9283049037901 41.845 3 -1.9928551451859267 0.44645093832028143 1.0 ['ENST00000281830.3_1_2:223918801-223918864:+|nuORF'] 21872 4507 ESEFYLAMN True NCI_RA007_Epitope_Rep1 1102.4641118254199 1102.46300993586 21.634 2 -1.993103668593318 0.44645696734702767 1.0 ['ENST00000441829.2_9:44302237-44303615:+|nuORF', 'ENSG00000140285|ENST00000267843|FGF7'] 63203 16711 LNVRKAAHEAL True NCI_RA007_Epitope_Rep3 1220.6989543302398 1220.6978499358602 73.549 2 -1.9932574431118275 0.446495670642052 1.0 ['ENSG00000196497|ENST00000354464|IPO4', 'nc|ENSG00000196497|Q8TEX9-2|IPO4', 'ENST00000559588.5_1_14:24652221-24657802:-|nuORF', 'ENST00000558780.5_2_14:24651254-24657791:-|nuORF', 'ENST00000560935.1_1_14:24652387-24652645:-|nuORF', 'ENST00000561379.1_1_14:24651787-24652670:-|nuORF'] 109423 10742 TGRGGGGA True PC9_epitope_Rep3 631.3037865632699 631.30323496793 46.272 1 -1.9935902046696514 0.4465077273271834 1.0 ['ENST00000528220.1_1_11:65487749-65488268:-|nuORF', 'ENST00000308418.8_1_11:65487749-65488293:-|nuORF'] 20499 4979 EPTSEKKL True H1975_Epitope_Rep2 930.5022115863 930.50110993586 24.235 2 -1.9936268123070233 0.4465077273271834 1.0 ['ENST00000559010.1_1_15:85081807-85085521:-|nuORF', 'ENST00000354771.8_1_15:85081845-85089490:-|nuORF', 'ENST00000339094.5_1_15:85081807-85112930:-|nuORF'] 18325 25653 EIVKHAHKLT True PC9_epitope_Rep1 1174.6822416369398 1174.68114993586 103.71 2 -1.993966059240307 0.44651355265880405 1.0 ['ENST00000450418.1_1_3:4024502-4025426:-|nuORF'] 28516 23139 FSGTHYWRLD True H1975_Epitope_Rep1 1280.59382055536 1280.59272993586 96.206 2 -1.9941355670221173 0.44651355265880405 1.0 ['ENSG00000110169|ENST00000265983|HPX'] 133705 23137 WLFRILQLL True PC9_epitope_Rep3 1200.7382999610797 1200.73666490379 94.264 3 -1.994177016264247 0.44651355265880405 1.0 ['nc|ENSG00000059122|Q4VC44-3|FLYWCH1', 'ENST00000575604.1_1_16:2983808-2987136:+|nuORF'] 64669 21689 LRKEIEVQHK True NCI_RA007_Epitope_Rep2 1278.7408191422198 1278.7397299358602 89.87 2 -1.994236881754684 0.44651355265880405 1.0 ['ENSG00000151773|ENST00000444614|CCDC122'] 27550 8646 FPLALAGP True H1975_Epitope_Rep1 784.4483255386399 784.44722993586 38.187 2 -1.9943081926976605 0.44651355265880405 1.0 ['nc|ENSG00000169083|P10275-3|AR', 'nc|ENSG00000169083|P10275-4|AR', 'ENST00000513847.5_1_X:66764886-66909456:+|nuORF', 'ENSG00000169083|ENST00000374690|AR'] 61325 5720 LLEDQLFIPDD True H1975_Epitope_Rep1 1316.6499980187998 1316.64890993586 27.072 2 -1.9943474497544633 0.44651355265880405 1.0 ['ENSG00000139985|ENST00000603540|ADAM21', 'ENST00000530196.1_1_14:70713981-70714470:-|nuORF'] 25909 8742 FGLFDYLRNPY True H1975_Epitope_Rep3 1403.6873865870298 1403.68628993586 38.631 2 -1.994369219888658 0.44651355265880405 1.0 ['nc|ENSG00000100346|Q9P0X4-3|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-2|CACNA1I', 'nc|ENSG00000100346|Q9P0X4-4|CACNA1I', 'ENSG00000100346|ENST00000402142|CACNA1I', 'CACNA1I|p.R750Afs*121|1|0.21|ENSG00000100346|chr22:39659031-39659032|-/G|frameshift_variant', 'CACNA1I|p.R935Dfs*23|1|0.3|ENSG00000100346|chr22:39661207-39661207|C/-|frameshift_variant'] 12708 9385 DLFMMPRI True PC9_epitope_Rep2 1021.5088942732099 1021.50778993586 41.436 2 -1.994421368952815 0.44651355265880405 1.0 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA'] 93513 5774 RSLMPGPV True PC9_epitope_Rep1 855.4636583329499 855.46256993586 27.027 2 -1.9945691784135988 0.44651355265880405 1.0 ['DCAF4L2|p.Q181Rfs*12|2|0.29|ENSG00000176566|chr8:87873431-87873431|G/-|frameshift_variant'] 13370 27198 DNDPVFTQ True PC9_epitope_Rep5 934.40322582102 934.40212993586 111.41 2 -1.9945813990592778 0.44651355265880405 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1', 'nc|ENSG00000075275|Q9NYQ6-2|CELSR1'] 121980 24477 VGQAGLERLT True PC9_epitope_Rep2 1042.5771078620598 1042.57657496793 99.74 1 -1.994690788017232 0.44653163454208866 1.0 ['nc|ENSG00000131747|P11388-4|TOP2A', 'ENST00000510078.5_1_3:129117911-129118223:-|nuORF'] 82908 22211 PWAGLEKH True PC9_epitope_Rep2 936.48175092524 936.48064993586 90.914 2 -1.9947776752953863 0.44653163454208866 1.0 ['LTR2752_dup21|chr2:81481148-81482372:-|1.992639235350852|0.0780133736102343|4.67|458.0|40|1|anti-sense'] 39014 23589 HKGKQIFK True NCI_RA007_Epitope_Rep4 984.5868847001199 984.58578993586 102.33 2 -1.9947890785493998 0.44653163454208866 1.0 ['ZC3H6|p.C278F|1|0.24|ENSG00000188177|chr2:112316555-112316555|G/T|missense_variant'] 138108 15560 YQHCLFIPFPT True PC9_epitope_Rep5 1364.6587293110397 1364.65762993586 64.863 2 -1.9951564299069662 0.4465594407117422 1.0 ['ENST00000267884.10_1_15:40328186-40328351:-|nuORF'] 30916 4756 GASEGPPA True H1975_Epitope_Rep3 684.3078688841999 684.3073249679301 23.42 1 -1.9957113127819515 0.4465955987238259 1.0 ['ENSG00000099331|ENST00000682292|MYO9B'] 32156 20431 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 85.525 2 -1.9958842879479197 0.4465955987238259 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 125790 26725 VNLKLGDD True H1975_Epitope_Rep1 872.4603467743199 872.45924993586 111.29 2 -1.99593113568583 0.4465955987238259 1.0 ['ENST00000528824.1_1_1:99156655-99156700:+|nuORF'] 81596 24932 PRLSDFRRRRS True PC9_epitope_Rep2 1444.81236137304 1444.81126993586 101.57 2 -1.9959591838494857 0.4465955987238259 1.0 ['ENSG00000171522|ENST00000302472|PTGER4', 'ENST00000513635.1_1_5:40681836-40685490:+|nuORF'] 118437 7083 VDPSFLAA True NCI_RA007_Epitope_Rep3 818.4174193331799 818.41632993586 34.978 2 -1.9959997392199391 0.4465955987238259 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 43351 24077 IHKLMRWIR True PC9_epitope_Rep5 1251.73865139759 1251.7375499358602 97.595 2 -1.9960812678667004 0.4465955987238259 1.0 ['ENSG00000164077|ENST00000296473|MON1A', 'nc|ENSG00000164077|Q86VX9|MON1A', 'ENST00000486107.5_1_3:49946449-49946602:-|nuORF', 'nc|ENSG00000164077|Q86VX9-2|MON1A', 'nc|ENSG00000164077|Q86VX9-4|MON1A'] 30848 19528 GAQPDGEP True H1975_Epitope_Rep2 769.32424722433 769.32369496793 81.034 1 -1.996144308126083 0.4465967617243219 1.0 ['nc|ENSG00000133124|O14654|IRS4', 'ENSG00000133124|ENST00000372129|IRS4'] 10233 5419 CFIYLSKPGQW True H1975_Epitope_Rep1 1340.6587293110397 1340.65762993586 25.901 2 -1.996151783660991 0.4465967617243219 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 5290 9874 ALRRGGPL True PC9_epitope_Rep4 838.5137197598598 838.51262993586 45.63 2 -1.9962060086986573 0.44659792467416515 1.0 ['ENST00000393892.7_1_17:40126102-40126558:+|nuORF'] 61364 5043 LLEGTPDTP True PC9_epitope_Rep1 941.4705771048499 941.46948993586 24.255 2 -1.9962614284166982 0.44659792467416515 1.0 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 16530 8327 EEPVVPALRP True PC9_epitope_Rep2 1105.6131590176099 1105.61206993586 37.399 2 -1.9963428504263407 0.44661483852703554 1.0 ['nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'ENSG00000061938|ENST00000672887|TNK2', 'ENST00000420716.2_1_3:195591054-195595875:-|nuORF'] 46364 13913 ITHKDEFT True PC9_epitope_Rep2 989.4818104948899 989.48070993586 58.795 2 -1.9965067270172816 0.4466535283037357 1.0 ['chr2:31892134-31932067|142|17.79|0.23|6.25|-|1|MEMO1,MEMO1|1'] 32405 11190 GGGGGGGF True PC9_epitope_Rep2 564.2292246406801 564.22867496793 48.367 1 -1.9966765454071234 0.44667276369654213 1.0 ['CON__Q3TTY5', 'ENST00000396326.2_1_10:30806804-30806981:-|nuORF', 'KRT5|p.S547Wfs*20|1|0.11|ENSG00000186081|chr12:52515070-52515083|CCACACTGAGCCCA/-|frameshift_variant', 'ENSG00000186081|ENST00000252242|KRT5', 'CON__P13647', 'ENST00000552629.5_1_12:52910419-52914113:-|nuORF', 'KRT5|p.V273Cfs*22|1|0.21|ENSG00000186081|chr12:52518117-52518118|-/A|frameshift_variant', 'ENSG00000170185|ENST00000307017|USP38'] 25115 12648 FDLLLAEW True H1975_Epitope_Rep1 1005.5171333744499 1005.51602993586 53.704 2 -1.99679995197917 0.44667276369654213 1.0 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5', 'nc|ENSG00000070985|Q9NZQ8-3|TRPM5'] 43578 25047 IIFIKLNL True H1975_Epitope_Rep2 972.6371889374799 972.63608993586 102.92 2 -1.9968385144797773 0.44667276369654213 1.0 ['ENST00000344302.8_1_X:46332443-46332647:+|nuORF'] 90995 23202 RLKAGHGG True PC9_epitope_Rep4 794.4511195032999 794.45002993586 97.475 2 -1.9969040684690746 0.44667276369654213 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 30461 13619 GAGGIPGY True NCI_RA007_Epitope_Rep1 690.33368970922 690.33314496793 56.986 1 -1.9970162710219528 0.44667276369654213 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|288|1|anti-sense'] 68078 17802 LTPAMSPA True H1975_Epitope_Rep1 786.3945757136199 786.39402496793 74.122 1 -1.9970629302517464 0.4466787880107568 1.0 ['ENSG00000130702|ENST00000252999|LAMA5', 'LAMA5-C20orf151|1|fusion'] 3127 11537 AGDGRSAS True NCI_RA007_Epitope_Rep1 719.31983055023 719.31928496793 48.844 1 -1.9972241970924771 0.4467065868263473 1.0 ['ENSG00000155897|ENST00000286355|ADCY8', 'ADCY8|p.T492Nfs*14|1|0.09|ENSG00000155897|chr8:130937079-130937080|-/T|frameshift_variant'] 124763 14344 VLKLPVRSL True PC9_epitope_Rep5 1023.68045073179 1023.6793499358599 60.175 2 -1.99767395589992 0.4467427277477791 1.0 ['ENSG00000132313|ENST00000337109|MRPL35', 'ENST00000404272.2_1_6:13949414-13949672:+|nuORF', 'nc|ENSG00000132313|Q9NZE8-2|MRPL35', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 29976 9345 FYEAAPGPP True PC9_epitope_Rep2 947.4388830537498 947.43778993586 41.283 2 -1.9977353433194311 0.4467427277477791 1.0 ['ENSG00000128713|ENST00000249504|HOXD11'] 122498 22325 VGSRRGRR True PC9_epitope_Rep3 942.5583785364998 942.55783496793 91.159 1 -1.997879640415598 0.4467427277477791 1.0 ['ENST00000523094.5_2_5:157285974-157286100:-|nuORF'] 137609 6619 YLTVENKS True PC9_epitope_Rep6 952.48656152216 952.48546993586 34.174 2 -1.9979590673891834 0.4467427277477791 1.0 ['nc|ENSG00000186007|Q68G75-3|LEMD1', 'ENSG00000186007|ENST00000367153|LEMD1'] 138150 23559 YQLKVLGL True PC9_epitope_Rep6 932.5695033004798 932.56840993586 103.76 2 -1.9979666214130507 0.4467427277477791 1.0 ['ENST00000368886.9_1_10:124754038-124754206:-|nuORF'] 49062 15921 KFPFFTRP True H1975_Epitope_Rep2 1038.5650866263798 1038.56398993586 66.441 2 -1.9980129448500048 0.4467427277477791 1.0 ['ENSG00000186795|ENST00000334549|KCNK18'] 33004 24427 GIVMHPGDR True H1975_Epitope_Rep1 980.4861846826799 980.48508993586 101.26 2 -1.998160185509109 0.44675106955073424 1.0 ['ENST00000403258.1_1_6:88986231-88986483:-|nuORF'] 134430 26753 WTHGAQGG True H1975_Epitope_Rep1 812.3565504121198 812.35544993586 111.41 2 -1.9981748924708338 0.44675106955073424 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 547 4497 AAQNPKREI True NCI_RA007_Epitope_Rep3 1025.5617921510898 1025.5606899358602 24.526 2 -1.998316021567471 0.44675106955073424 1.0 ['nc|ENSG00000261052|P0DMM9-3|SULT1A3'] 118513 4929 VDSSHGFSS True NCI_RA007_Epitope_Rep4 921.38282472961 921.38227496793 25.422 1 -1.9983409635074671 0.44675106955073424 1.0 ['nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A', 'ENSG00000198826|ENST00000361627|ARHGAP11A', 'nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A', 'ARHGAP11A|p.K342N|3|0.2|ENSG00000198826|chr15:32629683-32629683|A/C|missense_variant'] 55334 20019 LASASHEMDR True PC9_epitope_Rep4 1115.5029569456299 1115.50184993586 85.138 2 -1.9983835141564747 0.44675106955073424 1.0 ['ENSG00000151320|ENST00000280979|AKAP6'] 84750 17849 QHHKKTKR True NCI_RA007_Epitope_Rep3 1061.62064443989 1061.61954993586 78.253 2 -1.9985479156625463 0.44676797805403756 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 91208 25560 RLRETKPLV True NCI_RA007_Epitope_Rep5 1110.6873270173799 1110.6862299358602 105.86 2 -1.998817062480016 0.4467726134755633 1.0 ['ENST00000489884.5_1_7:150777299-150777671:-|nuORF'] 36071 2696 GVEATVPGI True PC9_epitope_Rep1 841.4545331178898 841.45342993586 14.793 2 -1.9989123173723364 0.4467726134755633 1.0 ['ENSG00000089847|ENST00000318934|ANKRD24', 'nc|ENSG00000089847|Q8TF21-2|ANKRD24'] 10211 22794 CDSSTRIK True NCI_RA007_Epitope_Rep4 908.43856578392 908.43746993586 98.958 2 -1.9992354250932045 0.4467726134755633 1.0 ['TOPORS|p.G873Vfs*29|1|0.11|ENSG00000197579|chr9:32541889-32541907|GTTGTATCAGTAGCTTTTC/-|frameshift_variant', 'nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 118144 22153 VAVFHSSS True H1975_Epitope_Rep1 832.4079172786401 832.40682993586 92.173 2 -1.9993863267639136 0.4467726134755633 1.0 ['ENST00000273375.7_1_3:120408429-120408636:-|nuORF'] 136158 23926 YGGVGGPGAAG True PC9_epitope_Rep2 861.3980808709298 861.39698993586 97.51 2 -1.9994424827263875 0.4467726134755633 1.0 ['ENSG00000178233|ENST00000451188|TMEM151B'] 20983 11308 ERADWRRRQLR True NCI_RA007_Epitope_Rep2 1540.8447241304798 1540.84362993586 48.574 2 -1.9996281324785175 0.4467726134755633 1.0 ['ENSG00000095015|ENST00000399503|MAP3K1', 'MAP3K1|p.T946Kfs*22|1|0.62|ENSG00000095015|chr5:56882037-56882037|C/-|frameshift_variant', 'MAP3K1|p.T947Nfs*56|1|0.61|ENSG00000095015|chr5:56882039-56882040|AC/-|frameshift_variant'] 122996 10296 VGWSDSYTCEY True PC9_epitope_Rep5 1308.49686850568 1308.4957699358602 44.59 2 -1.999714586223248 0.4467726134755633 1.0 ['ENSG00000174123|ENST00000308973|TLR10'] 121031 22590 VGFFILLRIF True PC9_epitope_Rep4 1223.74305098835 1223.7424749679299 95.124 1 -1.9997206411936526 0.4467726134755633 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'ABCC12|p.H970N|1|0.3|ENSG00000140798|chr16:48101002-48101002|G/T|missense_variant'] 52392 23091 KPGKMFVLR True PC9_epitope_Rep4 1074.6372060208198 1074.63610993586 97.041 2 -1.9998299271136433 0.4467797938458524 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 15712 9059 EDAERREREER True NCI_RA007_Epitope_Rep2 1473.6920310264902 1473.6909299358601 39.84 2 -1.9999138433001546 0.4467797938458524 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 844 11423 ADGAHGMR True H1975_Epitope_Rep2 813.35517051313 813.35462496793 48.99 1 -1.99992733642433 0.4467797938458524 1.0 ['ENSG00000171873|ENST00000379453|ADRA1D'] 118614 14766 VEAPGGQK True NCI_RA007_Epitope_Rep4 784.40791727864 784.4073649679301 64.256 1 -1.99999697345089 0.4467858153558134 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'CAMSAP2-CARS|1|fusion', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 121230 13785 VGGQLWHL True PC9_epitope_Rep3 908.4868363056801 908.48572993586 58.102 2 -2.0001023560763675 0.44679183673469386 1.0 ['ENST00000429989.7_1_10:82280023-82280299:+|nuORF'] 55560 23216 LCFPRGVA True PC9_epitope_Rep4 861.4530936492499 861.45198993586 97.531 2 -2.0004042538708995 0.44682680481938203 1.0 ['ENST00000525619.5_1_8:144772228-144772294:+|nuORF', 'ENST00000526970.5_1_8:144767209-144773249:+|nuORF', 'ENST00000533031.5_1_8:144766681-144773252:+|nuORF'] 6514 16262 APTVRATR True PC9_epitope_Rep4 870.5035489989799 870.50244993586 70.505 2 -2.0007137908872545 0.44682680481938203 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 117514 15441 VAFAIPAA True NCI_RA007_Epitope_Rep3 758.4326754744999 758.43212496793 68.296 1 -2.000725797356978 0.44682680481938203 1.0 ['ENST00000501520.1_1_16:28303160-28303361:-|nuORF'] 135314 24124 YCKPKTLNF True PC9_epitope_Rep4 1112.56885167748 1112.56774993586 101.28 2 -2.0008969484821812 0.44682680481938203 1.0 ['ENST00000509080.5_1_5:180629908-180630064:+|nuORF'] 32457 15363 GGHGRGAR True H1975_Epitope_Rep2 766.3946672563399 766.39356993586 64.252 2 -2.0009480498894896 0.4468279622555262 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 78713 15119 PEEQLPKT True PC9_epitope_Rep1 940.48656152216 940.48601496793 62.974 1 -2.001042632894141 0.4468279622555262 1.0 ['ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-5|DENND1A'] 111362 14669 TLILPRLQQE True NCI_RA007_Epitope_Rep5 1209.7081220316102 1209.70648490379 63.092 3 -2.0010782832395204 0.44683398271696306 1.0 ['nc|ENSG00000106290|P49848-4|TAF6', 'nc|ENSG00000106290|P49848-2|TAF6', 'ENSG00000106290|ENST00000453269|TAF6', 'nc|ENSG00000106290|P49848-3|TAF6'] 43129 13430 IGPIQQII True PC9_epitope_Rep1 880.5382031721999 880.53710993586 56.519 2 -2.0013142504613364 0.44685088645342447 1.0 ['ENST00000367833.6_1_1:168154054-168154114:+|nuORF'] 36915 15825 GVQVLTQE True NCI_RA007_Epitope_Rep5 872.4603467743199 872.4597949679301 67.592 1 -2.0016994371140147 0.446855513597632 1.0 ['nc|ENSG00000159140|P18583-4|SON', 'nc|ENSG00000159140|P18583-2|SON', 'nc|ENSG00000159140|P18583-7|SON', 'ENSG00000159140|ENST00000356577|SON', 'nc|ENSG00000159140|P18583-5|SON', 'nc|ENSG00000159140|P18583-9|SON'] 23038 23241 EVKMIFLRK True PC9_epitope_Rep1 1162.6896355164997 1162.6890749679299 94.187 1 -2.0017401239382475 0.446855513597632 1.0 ['L1ME3G_dup9716|chrX:131361372-131362238:-|1.162874050545019|0.102023693220256|3.51|470.0|1|1|sense'] 97651 24937 SHCEHMGI True PC9_epitope_Rep6 912.35820728824 912.35710993586 110.82 2 -2.0019824832638453 0.446855513597632 1.0 ['OR52J3|p.Y180H|1|0.06|ENSG00000205495|chr11:5047063-5047063|T/C|missense_variant'] 38997 24739 HKEEWIRW True PC9_epitope_Rep3 1182.5934266325398 1182.59179490379 100.53 3 -2.0020560676219317 0.446855513597632 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 70829 11048 MEESHQEAT True H1975_Epitope_Rep2 1060.4131388817198 1060.41257496793 47.526 1 -2.002062505342569 0.446855513597632 1.0 ['ENSG00000107672|ENST00000369023|NSMCE4A', 'nc|ENSG00000107672|Q9NXX6-2|NSMCE4A', 'ENST00000483541.1_1_10:123719867-123724812:-|nuORF'] 36280 9010 GVGNGGSL True PC9_epitope_Rep1 659.32385330151 659.3233049679301 39.505 1 -2.002333494913949 0.446855513597632 1.0 ['ENSG00000005238|ENST00000322813|ATOSB', 'nc|ENSG00000005238|Q7L5A3-2|ATOSB'] 131220 26167 VVPQLKYKV True PC9_epitope_Rep3 1072.6644663144798 1072.6633699358601 106.68 2 -2.0024415989863695 0.446855513597632 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 134432 26889 WTHGAQGG True H1975_Epitope_Rep1 812.3565504121198 812.35544993586 112.09 2 -2.002542872193701 0.446855513597632 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 76419 14167 NSSSGGKN True PC9_epitope_Rep3 749.3303952339301 749.32928993586 59.579 2 -2.0029205346816346 0.4468615331040787 1.0 ['ENSG00000127445|ENST00000247970|PIN1', 'ENST00000380889.6_1_19:9947469-9960242:+|nuORF'] 24147 8739 EYSRKEVP True PC9_epitope_Rep5 1006.5083595958998 1006.50726993586 38.557 2 -2.002938160170809 0.4468675524795142 1.0 ['ENSG00000187889|ENST00000343433|FYB2', 'ENST00000493000.5_1_1:57206466-57216840:-|nuORF'] 36530 19728 GVKRFFKCP True NCI_RA007_Epitope_Rep4 1080.5902558284 1080.58967496793 85.256 1 -2.003122974887197 0.44689533593052866 1.0 ['ENSG00000065328|ENST00000378714|MCM10', 'nc|ENSG00000065328|Q7L590|MCM10', 'ENST00000485659.1_1_10:13240798-13246428:+|nuORF'] 113191 22355 TQDNPPVF True NCI_RA007_Epitope_Rep4 916.4290466460399 916.4279499358599 96.994 2 -2.0033428280070322 0.4469013548071168 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4'] 28956 14819 FTESKRKL True PC9_epitope_Rep5 1007.5763795860698 1007.57528993586 62.001 2 -2.0035480435170663 0.44691339216731774 1.0 ['ENST00000446957.6_2_13:33110995-33111067:-|nuORF'] 130147 15197 VTRPHSGP True NCI_RA007_Epitope_Rep1 849.44569976969 849.4451549679301 63.184 1 -2.003736086868806 0.44691339216731774 1.0 ['ENSG00000072310|ENST00000261646|SREBF1', 'nc|ENSG00000072310|P36956-4|SREBF1', 'nc|ENSG00000072310|P36956-3|SREBF1', 'nc|ENSG00000072310|P36956-2|SREBF1', 'ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 8948 16515 AVGQFRVV True PC9_epitope_Rep1 874.5024863698198 874.50138993586 68.348 2 -2.0038915396106485 0.44692658404152297 1.0 ['SYP|p.G16V|1|0.35|ENSG00000102003|chrX:49199023-49199023|C/A|missense_variant'] 60475 23710 LILSWFLAFLS True PC9_epitope_Rep3 1308.7481959384397 1308.7465649037902 96.485 3 -2.0040500597116 0.44692658404152297 1.0 ['ENST00000443016.1_1_10:11607160-11607337:-|nuORF'] 76693 10061 NTMGAQEAHIY True PC9_epitope_Rep4 1233.54482175761 1233.54372993586 46.368 2 -2.004255678428462 0.44692658404152297 1.0 ['nc|ENSG00000197430|Q96PE5-3|OPALIN', 'nc|ENSG00000197430|Q96PE5-4|OPALIN', 'nc|ENSG00000197430|Q96PE5-2|OPALIN', 'ENSG00000197430|ENST00000371172|OPALIN'] 93392 21797 RRWQITGECL True PC9_epitope_Rep6 1260.6397252019597 1260.63808490379 96.735 3 -2.0043193396961825 0.44692658404152297 1.0 ['ENSG00000137055|ENST00000397292|PLAA'] 67943 17848 LTLKPPLR True PC9_epitope_Rep1 936.6120368187999 936.61092993586 73.447 2 -2.0045657247895776 0.44693862006680957 1.0 ['nc|ENSG00000188596|Q96N23-2|CFAP54', 'ENSG00000188596|ENST00000524981|CFAP54', 'ENST00000342887.1_1_12:97043703-97159031:+|nuORF'] 83681 10525 QEALPEAPA True H1975_Epitope_Rep2 924.4552613938798 924.45416993586 45.505 2 -2.0046789489957293 0.44693862006680957 1.0 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 37405 9133 GVYPGMQN True NCI_RA007_Epitope_Rep2 864.3799882786401 864.37943496793 40.131 1 -2.004949314313583 0.4469518099818295 1.0 ['ENSG00000171316|ENST00000423902|CHD7', 'nc|ENSG00000171316|Q9P2D1-2|CHD7', 'CHD7|p.R1548Gfs*11|1|0.18|ENSG00000171316|chr8:60841749-60841749|G/-|frameshift_variant', 'CHD7|p.L471Ffs*104|2|0.22|ENSG00000171316|chr8:60742842-60742843|-/T|frameshift_variant', 'CHD7|p.A861Qfs*27|1|0.19|ENSG00000171316|chr8:60816468-60816468|G/-|frameshift_variant', 'nc|ENSG00000171316|Q9P2D1-4|CHD7', 'nc|ENSG00000171316|Q9P2D1-3|CHD7'] 38203 24939 HETGHVLG True PC9_epitope_Rep2 848.41406528824 848.41296993586 101.6 2 -2.0050089163101426 0.4469518099818295 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 103974 24105 SRRIQRDV True PC9_epitope_Rep3 1028.5839245779998 1028.5828299358602 98.003 2 -2.005013575382861 0.4469518099818295 1.0 ['ENSG00000074356|ENST00000389005|NCBP3', 'nc|ENSG00000074356|Q53F19-2|NCBP3'] 123227 17389 VHLSNDKVS True PC9_epitope_Rep2 997.51925863277 997.51816993586 72.148 2 -2.005044400600494 0.4469518099818295 1.0 ['SLC8A1|p.V498D|1|0.38|ENSG00000183023|chr2:40428788-40428788|A/T|missense_variant'] 32334 24722 GGASKWPV True H1975_Epitope_Rep1 800.4180880395198 800.41698993586 102.41 2 -2.0054434233057044 0.4469927756984942 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 23419 22838 EVVPLCLPAP True PC9_epitope_Rep4 1036.5627036678798 1036.5616099358601 96.069 2 -2.0055325605871612 0.4469927756984942 1.0 ['DUSP2|p.Q303Sfs*80|1|0.27|ENSG00000158050|chr2:96143862-96143862|C/-|frameshift_variant', 'ENST00000288943.4_1_2:96809359-96809716:-|nuORF'] 82609 18872 PVKMLLGHM True PC9_epitope_Rep5 1024.5561788188 1024.55508993586 77.61 2 -2.005582253844133 0.4469927756984942 1.0 ['nc|ENSG00000126226|Q5JVF3-3|PCID2', 'nc|ENSG00000126226|Q5JVF3-2|PCID2', 'ENSG00000126226|ENST00000337344|PCID2', 'nc|ENSG00000126226|Q5JVF3-4|PCID2'] 16051 5314 EEANLGLP True PC9_epitope_Rep6 841.4181476091699 841.41704993586 28.272 2 -2.0058075487266573 0.4469927756984942 1.0 ['nc|ENSG00000152270|Q13370-2|PDE3B', 'ENSG00000152270|ENST00000282096|PDE3B'] 30467 8220 GAGHAWPG True H1975_Epitope_Rep2 751.3401720719899 751.33962496793 36.572 1 -2.005889648596933 0.4469927756984942 1.0 ['ENST00000564098.5_1_16:1795439-1795685:+|nuORF'] 120370 15624 VFRNLRER True NCI_RA007_Epitope_Rep5 1088.6203100867199 1088.61920993586 66.806 2 -2.006129642945453 0.44700967219000576 1.0 ['ENST00000432610.1_1_10:22896825-22898637:-|nuORF', 'ENST00000422321.5_1_10:22856588-22898637:-|nuORF', 'nc|ENSG00000276293|P78356-2|PIP4K2B', 'nc|ENSG00000150867|P48426-2|PIP4K2A', 'ENSG00000150867|ENST00000376573|PIP4K2A', 'ENSG00000276293|ENST00000619039|PIP4K2B'] 71169 23305 MFDPVMEI True NCI_RA007_Epitope_Rep5 980.43472627344 980.43362993586 96.928 2 -2.0062253988416954 0.44701568857845375 1.0 ['ENSG00000174106|ENST00000308330|LEMD3', 'ENST00000544506.1_1_12:65637232-65639560:+|nuORF'] 65542 13677 LSGDARRCL True H1975_Epitope_Rep1 989.50764840325 989.50709496793 57.744 1 -2.0064909338922883 0.44704346407006473 1.0 ['ENSG00000085840|ENST00000371568|ORC1'] 89868 7691 RFLYLQKEEYW True NCI_RA007_Epitope_Rep1 1573.79291428473 1573.79180993586 33.909 2 -2.006607167055448 0.44704461633865333 1.0 ['ENST00000273047.8_1_3:19988696-19992457:+|nuORF'] 137305 22896 YLHKVLRF True PC9_epitope_Rep2 1074.6338348925399 1074.6327299358602 93.573 2 -2.006651523529527 0.44704461633865333 1.0 ['ENST00000336032.3_1_6:89794159-89794297:+|nuORF'] 13773 7052 DQPRPKGP True PC9_epitope_Rep1 893.4719145175299 893.47080993586 31.932 2 -2.0068336503329736 0.44705063208511936 1.0 ['ENSG00000104953|ENST00000246112|TLE6'] 118018 13927 VASSEAVAEK True H1975_Epitope_Rep3 989.5029398622898 989.5023949679301 58.884 1 -2.006947234563519 0.44705178416013924 1.0 ['ENSG00000135631|ENST00000486777|RAB11FIP5', 'ENST00000493523.2_1_2:73302651-73316730:-|nuORF', 'nc|ENSG00000135631|Q9BXF6|RAB11FIP5', 'ENST00000479196.1_1_2:73308605-73315425:-|nuORF'] 40954 23357 HWPKGLTP True NCI_RA007_Epitope_Rep4 934.5024863698198 934.50138993586 101.41 2 -2.0069820752795637 0.44705178416013924 1.0 ['ENST00000311604.7_1_11:1913145-1913319:+|nuORF'] 10242 7863 CFIYLSKPGQW True PC9_epitope_Rep5 1340.6587293110397 1340.65762993586 35.188 2 -2.007148313483505 0.4470795574460678 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 10521 23695 CPHCQVLQ True PC9_epitope_Rep4 926.4102428611 926.40914993586 99.495 2 -2.007220838163715 0.44708045076795894 1.0 ['USP43|p.S1068Afs*45|1|0.23|ENSG00000154914|chr17:9728815-9728815|C/-|frameshift_variant', 'nc|ENSG00000154914|Q70EL4-4|USP43', 'ENSG00000154914|ENST00000285199|USP43', 'nc|ENSG00000154914|Q70EL4-2|USP43', 'nc|ENSG00000154914|Q70EL4-3|USP43'] 85076 17665 QIPMWSQRV True PC9_epitope_Rep6 1143.58589872395 1143.5848099358602 80.587 2 -2.0073369357103226 0.44708045076795894 1.0 ['ENST00000498426.5_1_1:196286396-196434478:-|nuORF', 'nc|ENSG00000162687|Q6UVM3-4|KCNT2', 'ENST00000610076.1_1_1:196227273-196577439:-|nuORF', 'KCNT2|p.N1058Ifs*3|2|0.66|ENSG00000162687|chr1:196258232-196258232|T/-|frameshift_variant', 'nc|ENSG00000162687|Q6UVM3-3|KCNT2', 'nc|ENSG00000162687|Q6UVM3-2|KCNT2', 'ENSG00000162687|ENST00000294725|KCNT2'] 133820 9178 WLVLGRAV True NCI_RA007_Epitope_Rep3 912.5545219426798 912.55342993586 43.19 2 -2.007461783564359 0.44708045076795894 1.0 ['ENSG00000197496|ENST00000359271|SLC2A10'] 59376 13720 LGLELRPEA True PC9_epitope_Rep5 996.5603951687599 996.55928993586 57.8 2 -2.007555349894008 0.44708045076795894 1.0 ['ENSG00000142327|ENST00000270357|RNPEPL1'] 25790 24005 FFWLKLKIN True PC9_epitope_Rep2 1207.7117508600697 1207.71117496793 97.83 1 -2.0077515425834145 0.44708045076795894 1.0 ['ENSG00000121381|ENST00000240691|TAS2R9'] 127030 17565 VPYHYFEK True NCI_RA007_Epitope_Rep3 1081.52328138405 1081.52218993586 77.054 2 -2.007755072822386 0.44708045076795894 1.0 ['ENSG00000136840|ENST00000335791|ST6GALNAC4', 'ENST00000495983.1_1_9:130670673-130672537:-|nuORF'] 85564 25456 QLLKKFLKN True PC9_epitope_Rep1 1130.7175645164998 1130.71646993586 102.9 2 -2.0078401090019393 0.44708045076795894 1.0 ['PDE4D-DEPDC1B|2|fusion', 'ENSG00000035499|ENST00000265036|DEPDC1B', 'ENST00000512078.5_1_5:59893582-59984814:-|nuORF', 'PDE4D-DEPDC1B|1|fusion', 'nc|ENSG00000035499|Q8WUY9-2|DEPDC1B'] 112740 17904 TPKKNKHKR True NCI_RA007_Epitope_Rep3 1135.6938093801498 1135.6927099358602 78.462 2 -2.0079209869331285 0.44708045076795894 1.0 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF'] 56698 8850 LEAEIAYG True PC9_epitope_Rep1 864.4228986364399 864.42180993586 38.882 2 -2.0080259184075735 0.44708045076795894 1.0 ['LAGE3|p.H79Y|1|0.69|ENSG00000196976|chrX:154478365-154478365|G/A|missense_variant'] 126573 13953 VPPMAGGK True H1975_Epitope_Rep3 755.3999954472299 755.3994449679301 58.986 1 -2.008073144935021 0.44708045076795894 1.0 ['ENSG00000237649|ENST00000428849|KIFC1'] 29993 5761 FYFVDDIDDR True H1975_Epitope_Rep3 1303.5720820512697 1303.57098993586 27.186 2 -2.008077113502132 0.44708045076795894 1.0 ['ENSG00000123384|ENST00000243077|LRP1', 'LRP1|p.E1490Gfs*6|1|0.15|ENSG00000123384|chr12:57178458-57178459|-/G|frameshift_variant'] 100510 21629 SLPPGAVP True PC9_epitope_Rep1 736.41194002992 736.41139496793 88.022 1 -2.0082399040048977 0.44708275321963103 1.0 ['ENST00000482399.5_1_6:33218678-33219376:-|nuORF'] 90810 17761 RKSKKTEK True NCI_RA007_Epitope_Rep5 1003.6138277239498 1003.61272993586 75.103 2 -2.00825753478356 0.44708275321963103 1.0 ['nc|ENSG00000158528|Q9ULJ8-4|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-5|PPP1R9A', 'ENSG00000158528|ENST00000433360|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8|PPP1R9A', 'nc|ENSG00000158528|Q9ULJ8-2|PPP1R9A'] 131221 26299 VVPQLKYKV True PC9_epitope_Rep3 1072.6644663144798 1072.6633699358601 107.36 2 -2.008312577262848 0.44708275321963103 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 135360 6083 YDEVFMAFA True NCI_RA007_Epitope_Rep1 1091.4633835494299 1091.46228993586 27.699 2 -2.0083833629347385 0.44708275321963103 1.0 ['MGST1|p.D9Y|1|0.31|ENSG00000008394|chr12:16354277-16354277|G/T|missense_variant'] 45274 6063 ISAADRLEA True H1975_Epitope_Rep2 944.4927095317599 944.49160993586 28.299 2 -2.0087026371234673 0.44713227536247646 1.0 ['ENSG00000114491|ENST00000232607|UMPS', 'nc|ENSG00000114491|P11172-4|UMPS', 'nc|ENSG00000114491|P11172-2|UMPS', 'nc|ENSG00000114491|P11172-3|UMPS'] 112741 18578 TPKKNKHKR True NCI_RA007_Epitope_Rep4 1135.6938093801498 1135.6927099358602 80.369 2 -2.008942352663134 0.44714916574213054 1.0 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF'] 11160 22614 DEGLRSLKGI True PC9_epitope_Rep6 1086.6033226099 1086.6022299358601 100.03 2 -2.0090912712616813 0.44716605575435886 1.0 ['nc|ENSG00000083444|Q02809-2|PLOD1', 'ENSG00000083444|ENST00000196061|PLOD1'] 140407 10195 YYFCRWYRNRK True NCI_RA007_Epitope_Rep1 1653.7986854548496 1653.79758993586 43.668 2 -2.009370074660096 0.44722874793352474 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 48243 7094 KDEVRYEVNCS True NCI_RA007_Epitope_Rep1 1340.6030649097197 1340.60196993586 31.587 2 -2.0093753082607857 0.44722874793352474 1.0 ['ENSG00000176928|ENST00000652361|GCNT4'] 78919 20519 PFCLKVSK True PC9_epitope_Rep6 920.5153595526399 920.5142699358599 91.656 2 -2.0095193553476682 0.44722874793352474 1.0 ['ENSG00000056277|ENST00000370978|ZNF280C'] 4883 12400 ALGEVLRLN True PC9_epitope_Rep3 983.57637958607 983.5758349679301 52.725 1 -2.009572663913854 0.44722874793352474 1.0 ['nc|ENSG00000100565|Q0VAA2|LRRC74A', 'ENSG00000100565|ENST00000689127|LRRC74A'] 90116 18230 RGRRILEV True PC9_epitope_Rep2 997.6144964302898 997.61338993586 75.439 2 -2.009795564877286 0.44722874793352474 1.0 ['AluSz_dup11808|chr2:85658498-85658822:-|1.0215032426933477|0.0905077193686202|3.5|421.0|8|3|sense'] 51857 14680 KKLRHLLLPSE True H1975_Epitope_Rep3 1332.82415484336 1332.8224949037901 61.836 3 -2.0103170962937336 0.44725765930372935 1.0 ['ENST00000201979.2_1_20:30064033-30064156:+|nuORF'] 11548 21814 DGNGAKRRR True PC9_epitope_Rep6 1028.55877245932 1028.55766993586 96.808 2 -2.0103331957350417 0.44725765930372935 1.0 ['ENST00000435680.5_1_15:31283038-31283785:-|nuORF'] 39237 18657 HLKNLRKGQ True NCI_RA007_Epitope_Rep3 1092.651610215 1092.65050993586 81.623 2 -2.0104442220910577 0.44725765930372935 1.0 ['nc|ENSG00000104093|Q8TDJ6|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-3|DMXL2', 'ENSG00000104093|ENST00000560891|DMXL2', 'nc|ENSG00000104093|Q8TDJ6-2|DMXL2', 'DMXL2|p.P2600Hfs*63|1|0.09|ENSG00000104093|chr15:51464681-51464681|G/-|frameshift_variant'] 80318 18875 PLFFLKWR True NCI_RA007_Epitope_Rep5 1105.6436713002497 1105.6425699358601 79.447 2 -2.0106067300970594 0.44725880651230576 1.0 ['ENST00000369063.7_1_6:107077156-107077285:-|nuORF'] 11722 4183 DHGEGSPG True H1975_Epitope_Rep3 754.2881960687799 754.2876449679301 21.209 1 -2.0106259118133334 0.44725880651230576 1.0 ['ENST00000396556.6_1_3:32022633-32022780:-|nuORF'] 38275 20886 HFGFILLM True H1975_Epitope_Rep3 976.52044493308 976.51934993586 87.222 2 -2.010800708548971 0.4472648178357803 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 64697 20601 LRLKVVKYPL True H1975_Epitope_Rep2 1227.8067138740698 1227.80506490379 85.335 3 -2.0110855838861896 0.4472779868194967 1.0 ['ENST00000507765.1_1_4:6290695-6304192:+|nuORF', 'ENSG00000109501|ENST00000226760|WFS1'] 126030 8890 VPAPRGVPAS True PC9_epitope_Rep1 949.5345147740899 949.53340993586 39.035 2 -2.0111124277277153 0.4472779868194967 1.0 ['ENST00000352580.7_2_2:87013010-87017728:-|nuORF', 'ENST00000283635.7_2_2:87016528-87018429:-|nuORF'] 21871 4411 ESEFYLAMN True NCI_RA007_Epitope_Rep1 1102.4641118254199 1102.46300993586 21.271 2 -2.0111578447992997 0.4472779868194967 1.0 ['ENST00000441829.2_9:44302237-44303615:+|nuORF', 'ENSG00000140285|ENST00000267843|FGF7'] 27155 18843 FLRVRANR True NCI_RA007_Epitope_Rep4 1030.6148307834599 1030.6137299358602 81.503 2 -2.0114556781886015 0.4472779868194967 1.0 ['ENST00000475378.5_1_1:45097966-45116444:+|nuORF', 'nc|ENSG00000187147|Q5VTB9-3|RNF220', 'ENSG00000187147|ENST00000361799|RNF220'] 10239 7157 CFIYLSKPGQW True PC9_epitope_Rep2 1340.6587293110397 1340.65762993586 32.922 2 -2.011671673089099 0.4472791334986298 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 122587 12517 VGTGGLGK True NCI_RA007_Epitope_Rep2 687.39153893851 687.39099496793 53.3 1 -2.011718117683781 0.4472791334986298 1.0 ['ENST00000525308.1_1_8:145138262-145138586:+|nuORF', 'ENST00000532758.5_1_8:145137633-145138586:+|nuORF'] 15214 5419 EAFRGITDEK True NCI_RA007_Epitope_Rep3 1164.5775017848798 1164.57640993586 28.325 2 -2.011942511551421 0.44729716504094214 1.0 ['MBL2|p.L184R|1|0.46|ENSG00000165471|chr10:52768333-52768333|A/C|missense_variant'] 135977 24112 YFEGIHLD True H1975_Epitope_Rep1 992.46034677432 992.45924993586 100.03 2 -2.0119611747558834 0.44729716504094214 1.0 ['ENSG00000176208|ENST00000321990|ATAD5', 'ATAD5|p.P1832L|1|0.17|ENSG00000176208|chr17:30894873-30894873|C/T|missense_variant'] 58808 13113 LFQIDVSEFRY True H1975_Epitope_Rep3 1415.70851595443 1415.7074099358601 55.685 2 -2.0119927258219876 0.44729716504094214 1.0 ['ENST00000531971.1_1_11:118657164-118657236:-|nuORF'] 80523 25324 PLLPLIWQKFF True PC9_epitope_Rep2 1400.8220295850394 1400.82092993586 103.08 2 -2.012004046917997 0.4473031752936059 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF'] 36251 15649 GVGGPFPA True PC9_epitope_Rep2 700.3544251538 700.3538749679301 65.468 1 -2.012060528551229 0.4473183513269622 1.0 ['ENST00000375151.4_1_X:54471110-54471305:+|nuORF'] 92212 14900 RQHRGAGG True H1975_Epitope_Rep3 837.4317810410497 837.43068993586 62.699 2 -2.01222965511615 0.4473183513269622 1.0 ['ENST00000570731.5_1_17:1666139-1673249:+|nuORF', 'ENST00000254722.8_1_17:1665354-1673249:+|nuORF'] 15499 7625 EAQPQLLDLRI True H1975_Epitope_Rep2 1294.7245003717399 1294.7234099358602 34.282 2 -2.012549040016976 0.4473183513269622 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 37068 10478 GVSGMATT True NCI_RA007_Epitope_Rep5 722.3268900766201 722.32634496793 46.936 1 -2.012598774459258 0.4473183513269622 1.0 ['PGPEP1|p.V73L|1|0.41|ENSG00000130517|chr19:18357395-18357395|G/C|missense_variant', 'ENSG00000130517|ENST00000269919|PGPEP1'] 38597 12846 HHHTTQHT True H1975_Epitope_Rep3 997.4478250280102 997.44672993586 54.634 2 -2.012829952476472 0.4473183513269622 1.0 ['ENST00000447654.5_1_6:34212664-34212856:+|nuORF'] 91779 10275 RPLAALYA True NCI_RA007_Epitope_Rep2 873.5072373970901 873.50614993586 44.557 2 -2.0129160510683413 0.4473183513269622 1.0 ['ENSG00000149654|ENST00000537909|CDH22'] 116282 21108 TVVKDLWP True PC9_epitope_Rep1 956.5331177917599 956.53256496793 86.019 1 -2.0129227333593875 0.4473183513269622 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A'] 59615 7215 LGSGHHHGPGP True PC9_epitope_Rep2 1051.49477522043 1051.49366993586 33.141 2 -2.012930293023775 0.4473183513269622 1.0 ['ENSG00000105997|ENST00000612286|HOXA3'] 13576 15965 DPPPSPPREV True PC9_epitope_Rep5 1089.54547338061 1089.54436993586 66.399 2 -2.0129601721115185 0.4473183513269622 1.0 ['ENST00000589123.5_2_19:3464632-3465073:+|nuORF'] 124970 6885 VLNENNVPL True PC9_epitope_Rep2 1010.53965972418 1010.53856993586 31.884 2 -2.0131826089658102 0.4473183513269622 1.0 ['nc|ENSG00000115109|Q9HCM4-4|EPB41L5', 'nc|ENSG00000115109|Q9HCM4-3|EPB41L5', 'ENSG00000115109|ENST00000263713|EPB41L5'] 53134 23494 KSKVTLSS True H1975_Epitope_Rep2 848.49673228304 848.49562993586 96.85 2 -2.0132239335272732 0.4473183513269622 1.0 ['nc|ENSG00000155657|Q8WZ42-6|TTN'] 19656 23593 ELRTRSAKKRR True PC9_epitope_Rep3 1399.8484125285897 1399.84730993586 96.036 2 -2.013253725073971 0.4473183513269622 1.0 ['ENSG00000140534|ENST00000268138|TICRR', 'nc|ENSG00000140534|Q7Z2Z1-2|TICRR', 'chr15:89601976-89602796|489|10.41|0.49|4.41|+|1|TICRR,TICRR|1'] 75272 21875 NPPPAPQRV True PC9_epitope_Rep5 974.5297637468199 974.52866993586 89.18 2 -2.0132553995489366 0.4473183513269622 1.0 ['SEMA6A|p.L818Afs*10|1|0.23|ENSG00000092421|chr5:116447253-116447255|AGG/T|frameshift_variant', 'ENSG00000092421|ENST00000343348|SEMA6A', 'nc|ENSG00000092421|Q9H2E6-2|SEMA6A'] 49501 16310 KKAYRKLAL True NCI_RA007_Epitope_Rep5 1089.7022488055297 1089.70114993586 69.492 2 -2.0133931829988923 0.4473183513269622 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'ENST00000398991.3_1_4:100831524-100867699:-|nuORF', 'ENST00000488001.5_1_7:157151266-157161444:+|nuORF', 'ENST00000567680.1_1_15:66064063-66064450:-|nuORF', 'ENST00000464877.1_1_3:186289902-186295640:+|nuORF', 'ENST00000474664.5_1_4:100844167-100867674:-|nuORF', 'ENST00000526843.2_1_11:127810983-127811547:-|nuORF', 'ENSG00000179407|ENST00000319153|DNAJB8', 'ENSG00000090520|ENST00000265028|DNAJB11', 'ENSG00000168724|ENST00000648817|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-3|DNAJC21', 'nc|ENSG00000168724|Q5F1R6-2|DNAJC21', 'ENSG00000170464|ENST00000302060|DNAJC18', 'ENST00000507405.5_1_5:138755893-138773164:-|nuORF', 'nc|ENSG00000164031|Q8TBM8-2|DNAJB14', 'ENSG00000164031|ENST00000442697|DNAJB14', 'nc|ENSG00000293135|Q8WWF6|DNAJB3', 'DNAJB6-AGT|1|fusion', 'nc|ENSG00000105993|O75190-2|DNAJB6', 'nc|ENSG00000105993|O75190-3|DNAJB6', 'ENSG00000105993|ENST00000262177|DNAJB6', 'nc|ENSG00000086061|P31689-2|DNAJA1', 'ENSG00000086061|ENST00000330899|DNAJA1'] 78131 15861 PAPFYPSS True NCI_RA007_Epitope_Rep5 864.40176926904 864.40066993586 67.73 2 -2.0135843805363542 0.4473183513269622 1.0 ['ENST00000452802.5_1_3:8540357-8543323:-|nuORF'] 90842 25343 RKVNRFHKI True PC9_epitope_Rep3 1196.7254438615998 1196.7243499358601 102.9 2 -2.0136054214494346 0.4473183513269622 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'ENST00000483585.5_1_7:45002340-45005995:-|nuORF', 'ENST00000463516.5_1_7:45003626-45005995:-|nuORF'] 112801 5973 TPLSAAAHTH True PC9_epitope_Rep1 1004.5039429218 1004.50284993586 27.789 2 -2.013633809474159 0.4473183513269622 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 22926 11207 EVGKDERVI True PC9_epitope_Rep4 1043.56112344475 1043.56002993586 50.884 2 -2.0137318909578505 0.44732436017308486 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'ENST00000533912.1_1_6:131191025-131199321:-|nuORF'] 107804 7555 TAPEKRSL True PC9_epitope_Rep6 900.5028802926399 900.50178993586 38.333 2 -2.01405319371879 0.44732779613845886 1.0 ['POU4F3|p.A282T|2|0.18|ENSG00000091010|chr5:146340271-146340271|G/A|missense_variant'] 70684 11545 MDKDGYFWFVA True PC9_epitope_Rep4 1377.60635938501 1377.6052699358602 52.17 2 -2.014125253033046 0.44732779613845886 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 103177 12378 SQPGPPGN True H1975_Epitope_Rep1 752.34531702208 752.34476496793 52.645 1 -2.0141329048556282 0.44732779613845886 1.0 ['ENST00000553395.5_3_14:100828256-100841932:-|nuORF', 'ENST00000553545.5_3_14:100840588-100841932:-|nuORF', 'ENST00000556645.5_1_14:100841655-100841932:-|nuORF'] 89675 4981 REVQDPAP True H1975_Epitope_Rep2 910.4508447197799 910.44974993586 24.242 2 -2.014540431685917 0.44732779613845886 1.0 ['ENSG00000055950|ENST00000318364|MRPL43', 'nc|ENSG00000055950|Q8N983-3|MRPL43', 'nc|ENSG00000055950|Q8N983-2|MRPL43', 'nc|ENSG00000055950|Q8N983|MRPL43', 'nc|ENSG00000055950|Q8N983-6|MRPL43', 'nc|ENSG00000055950|Q8N983-7|MRPL43'] 100049 23381 SLKMNIFP True PC9_epitope_Rep1 948.5102741722 948.5097249679301 94.716 1 -2.0145599820777282 0.44732779613845886 1.0 ['CCDC150|p.R120P|1|0.45|ENSG00000144395|chr2:196656815-196656815|G/C|missense_variant'] 103226 24599 SQRRLRRRW True PC9_epitope_Rep4 1312.7701026382397 1312.7690099358601 103.11 2 -2.014886656780409 0.44732779613845886 1.0 ['ENST00000378616.3_1_X:37553591-37553678:+|nuORF'] 64644 22064 LRGVGPSEPCA True PC9_epitope_Rep4 1084.53352879792 1084.5324299358601 93.088 2 -2.015020587564761 0.44733380442463444 1.0 ['chr3:118905718-119045392|154|10.07|0.0|19.94|-|1|TE_info:L1PA3,L1PA3_dup2038,L1,LINE,donor,+,119045392,119051153|IGSF11,None|112'] 58846 21060 LFRRFSWS True PC9_epitope_Rep2 1097.57704829241 1097.57647496793 86.463 1 -2.0151711434817443 0.4473349495037342 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|70|2|sense'] 3728 20832 AGSQTRDV True PC9_epitope_Rep6 832.4038945273599 832.40334496793 92.903 1 -2.015221025029845 0.4473349495037342 1.0 ['ENSG00000174521|ENST00000311308|TTC9B'] 133126 22678 WCPRELKID True NCI_RA007_Epitope_Rep2 1158.5855643707798 1158.58390490379 94.38 3 -2.0156690952363787 0.4473626994825412 1.0 ['ENSG00000104290|ENST00000240093|FZD3'] 16748 19960 EEYIREQIDWQ True H1975_Epitope_Rep1 1507.6943224422698 1507.69322993586 83.076 2 -2.0157290587566385 0.44736384389607564 1.0 ['ENSG00000091536|ENST00000647165|MYO15A'] 134551 23555 WVPPPAEN True H1975_Epitope_Rep3 908.43921740692 908.43812993586 98.281 2 -2.0157787768441815 0.44736384389607564 1.0 ['nc|ENSG00000154133|Q8WZ75-3|ROBO4', 'ROBO4|p.I751Sfs*43|2|0.13|ENSG00000154133|chr11:124887162-124887162|G/-|frameshift_variant', 'ROBO4|p.L856Cfs*18|2|0.14|ENSG00000154133|chr11:124886692-124886693|AG/T|frameshift_variant', 'nc|ENSG00000154133|Q8WZ75-2|ROBO4', 'ENSG00000154133|ENST00000306534|ROBO4'] 22413 20799 ETFDELHIE True H1975_Epitope_Rep2 1131.5084191655499 1131.50677490379 86.124 3 -2.016046340839437 0.44738072202715484 1.0 ['ENSG00000176771|ENST00000409261|NCKAP5'] 10325 24818 CHSTVITP True PC9_epitope_Rep3 856.41128840692 856.41018993586 100.84 2 -2.0161469885459034 0.44739016065566645 1.0 ['nc|ENSG00000255298|Q8NG78|OR8G5', 'ENST00000533406.2_1_11:124085485-124086391:+|nuORF', 'nc|ENSG00000255425|P0DMU2|OR8G3P', 'ENSG00000255298|ENST00000641992|OR8G5', 'OR8G1|p.S211Kfs*22|1|0.35|ENSG00000197849|chr11:124250305-124250306|-/A|frameshift_variant', 'ENSG00000197849|ENST00000641972|OR8G1'] 11509 10938 DGGTVWLEVL True NCI_RA007_Epitope_Rep1 1087.5549754351498 1087.5538699358601 46.539 2 -2.016170125104468 0.44739016065566645 1.0 ['nc|ENSG00000070610|Q9HCG7-2|GBA2', 'ENSG00000070610|ENST00000378103|GBA2', 'nc|ENSG00000070610|Q9HCG7-3|GBA2'] 88623 23721 RAPRLRVFLN True NCI_RA007_Epitope_Rep3 1240.7516586094398 1240.75056993586 102.83 2 -2.0162341003380506 0.44739016065566645 1.0 ['ENST00000469408.5_1_7:105148961-105162615:-|nuORF'] 18262 11490 EISTVHPEQ True PC9_epitope_Rep4 1038.4981888350198 1038.49708993586 51.958 2 -2.016424650691597 0.44739016065566645 1.0 ['nc|ENSG00000166908|Q8TBX8-2|PIP4K2C', 'nc|ENSG00000166908|Q8TBX8-3|PIP4K2C', 'ENSG00000166908|ENST00000354947|PIP4K2C'] 74531 21986 NKYAFGPR True H1975_Epitope_Rep2 951.4926499621099 951.49154993586 90.895 2 -2.016589856910416 0.44739016065566645 1.0 ['ENST00000432854.5_1_7:44100999-44101362:+|nuORF'] 15795 25142 EDGKSAISLN True PC9_epitope_Rep1 1032.50875351872 1032.5076499358602 101.59 2 -2.0166221179345394 0.44739016065566645 1.0 ['nc|ENSG00000150627|Q8IZU2|WDR17', 'ENSG00000150627|ENST00000508596|WDR17'] 10234 5327 CFIYLSKPGQW True NCI_RA007_Epitope_Rep3 1340.6587293110397 1340.65762993586 27.963 2 -2.01666791847919 0.44739016065566645 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 112998 9239 TPSQRQQKPS True PC9_epitope_Rep5 1155.59963421179 1155.5985299358601 40.485 2 -2.0167818897813423 0.4473913043478261 1.0 ['ENSG00000107672|ENST00000369023|NSMCE4A', 'ENST00000477289.1_1_10:123718853-123718946:-|nuORF'] 29977 10208 FYEAAPGPP True PC9_epitope_Rep3 947.4388830537498 947.43778993586 44.216 2 -2.0167955206239534 0.4473913043478261 1.0 ['ENSG00000128713|ENST00000249504|HOXD11'] 135320 24339 YCPACLVT True H1975_Epitope_Rep2 868.38229677776 868.38118993586 100.15 2 -2.0168014067911164 0.4473973108987946 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.N341Ifs*23|1|0.12|ENSG00000130589|chr20:63569211-63569214|TAGT/-|frameshift_variant', 'ENST00000370082.1_1_20:62201547-62204491:-|nuORF'] 79050 7559 PFREYELWAL True PC9_epitope_Rep4 1322.66592286646 1322.66428490379 36.451 3 -2.017131023625422 0.4474467946348992 1.0 ['ENSG00000171798|ENST00000304613|KNDC1', 'nc|ENSG00000171798|Q76NI1-4|KNDC1', 'KNDC1|p.C466R|1|0.33|ENSG00000171798|chr10:133188608-133188608|T/C|missense_variant'] 88949 20759 REDGGHGG True PC9_epitope_Rep5 783.32597855983 783.32543496793 84.901 1 -2.0173407262204477 0.44746366966294576 1.0 ['ENST00000421814.6_1_5:162932622-162940637:+|nuORF'] 55809 7974 LDELPMIY True H1975_Epitope_Rep1 992.48887002128 992.48776993586 35.623 2 -2.0173862359502883 0.44748054432415985 1.0 ['ENST00000527508.1_1_11:76637608-76709863:+|nuORF', 'ENST00000530334.5_1_11:76579304-76726162:+|nuORF', 'ENSG00000078124|ENST00000532485|ACER3'] 79551 6952 PGSPIFLM True NCI_RA007_Epitope_Rep2 860.44661128648 860.44606496793 31.661 1 -2.017501606168473 0.4474865496440411 1.0 ['nc|ENSG00000076555|O00763-3|ACACB', 'nc|ENSG00000076555|O00763-2|ACACB', 'ENSG00000076555|ENST00000338432|ACACB', 'ACACB|p.E1501Dfs*3|1|0.13|ENSG00000076555|chr12:109237218-109237228|GGAACTTAACC/-|frameshift_variant', 'ACACB|p.M1520Dfs*20|1|0.25|ENSG00000076555|chr12:109237272-109237273|-/A|frameshift_variant', 'ACACB|p.R1637Afs*31|1|0.16|ENSG00000076555|chr12:109241167-109241167|C/-|frameshift_variant', 'ACACB|p.S1919Wfs*12|1|0.19|ENSG00000076555|chr12:109250068-109250071|CTCT/-|frameshift_variant', 'ENST00000543080.1_1_12:109613818-109617755:+|nuORF', 'ACACB|p.G1821Afs*44|1|0.22|ENSG00000076555|chr12:109246337-109246337|G/-|frameshift_variant'] 64233 7277 LQKKRRRGLFN True NCI_RA007_Epitope_Rep4 1414.8633343167396 1414.86169490379 34.626 3 -2.0175774346456694 0.44750342368975937 1.0 ['CARMIL3|p.H1057N|1|0.25|ENSG00000186648|chr14:24065046-24065046|C/A|missense_variant'] 64706 25245 LRLRPPLRAAT True PC9_epitope_Rep2 1262.7935234214199 1262.7924299358601 102.77 2 -2.0178428073067107 0.4475420348451748 1.0 ['ENST00000589114.5_1_18:33877702-34289359:+|nuORF'] 104577 11708 SSSSGGKK True NCI_RA007_Epitope_Rep2 736.37153176992 736.3709849679301 50.138 1 -2.0180026385729213 0.4475551836193499 1.0 ['ENSG00000204209|ENST00000374542|DAXX', 'nc|ENSG00000204209|Q9UER7-5|DAXX', 'nc|ENSG00000204209|Q9UER7-4|DAXX', 'nc|ENSG00000204209|Q9UER7-2|DAXX'] 126182 14057 VPGFCPGH True H1975_Epitope_Rep2 812.3639442916799 812.36339496793 59.222 1 -2.018502923989172 0.4475551836193499 1.0 ['ENST00000314289.12_2_4:2516465-2516672:+|nuORF'] 128251 26362 VRYRIVTH True PC9_epitope_Rep5 1042.60359739342 1042.60250993586 107.26 2 -2.0185249956433005 0.4475551836193499 1.0 ['CDH4|p.Q321H|1|0.18|ENSG00000179242|chr20:61873813-61873813|G/T|missense_variant'] 64780 7137 LRSSRTAAVE True NCI_RA007_Epitope_Rep2 1088.59382055536 1088.59272993586 32.382 2 -2.0185698232693348 0.4475551836193499 1.0 ['ENST00000456633.1_1_1:155531903-155533104:+|nuORF'] 88348 18022 QYLVLEEL True PC9_epitope_Rep6 1005.5382627418498 1005.53716993586 81.949 2 -2.0187384505905146 0.44757205581880627 1.0 ['ENSG00000110921|ENST00000228510|MVK'] 120152 20927 VFLCWFFK True PC9_epitope_Rep5 1088.55174506136 1088.55064993586 85.553 2 -2.018989341475679 0.44757744672990624 1.0 ['ENST00000252818.4_1_19:18390620-18391193:-|nuORF'] 52706 25454 KQKQPRKKI True PC9_epitope_Rep2 1152.7455105998397 1152.7438649037902 103.59 3 -2.0190101849869135 0.44757744672990624 1.0 ['ENST00000283195.10_1_2:109384301-109384340:+|nuORF'] 90042 15880 RGGPVRVA True NCI_RA007_Epitope_Rep3 810.4824196315799 810.48132993586 70.119 2 -2.0190605427369137 0.44757744672990624 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 56239 8748 LDPVPLPA True NCI_RA007_Epitope_Rep4 820.4694549060399 820.46834993586 40.446 2 -2.0192096879447816 0.44757744672990624 1.0 ['ENST00000220509.9_1_15:41191948-41192161:+|nuORF'] 22165 22833 ETALLRFCL True NCI_RA007_Epitope_Rep5 1064.5688516774799 1064.56774993586 95.04 2 -2.019484867115644 0.44757744672990624 1.0 ['ENST00000436010.6_1_3:79067865-79067970:-|nuORF'] 128699 13322 VSNVCRFWE True PC9_epitope_Rep5 1138.5229641142198 1138.52131490379 56.256 3 -2.0198086778404005 0.44757744672990624 1.0 ['nc|ENSG00000006659|Q8TCE9-2|LGALS14'] 36681 20363 GVLVASSHKGC True NCI_RA007_Epitope_Rep5 1056.5386141783601 1056.53750993586 85.263 2 -2.0199618456000894 0.44757744672990624 1.0 ['ENSG00000178971|ENST00000651323|CTC1', 'nc|ENSG00000178971|Q2NKJ3-2|CTC1', 'ENST00000581967.1_1_17:8136173-8137964:-|nuORF'] 39640 22339 HPPSVKKA True NCI_RA007_Epitope_Rep3 862.50248636982 862.50138993586 97.085 2 -2.0199944867845594 0.44757744672990624 1.0 ['ENST00000459803.5_1_3:75472114-75480048:-|nuORF', 'ENST00000484945.5_1_3:75472114-75480048:-|nuORF', 'ENST00000491583.1_1_3:75475769-75480048:-|nuORF'] 110808 19763 TKRKEVKRY True H1975_Epitope_Rep1 1206.71968977482 1206.71858993586 82.25 2 -2.0202031232003104 0.44757744672990624 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 80335 21138 PLFTELKFY True PC9_epitope_Rep6 1156.6168474157198 1156.61574993586 94.154 2 -2.0202843212767427 0.44757744672990624 1.0 ['ENST00000555351.1_1_14:97263783-97319303:+|nuORF', 'ENSG00000100749|ENST00000216639|VRK1', 'VRK1|p.Q88L|1|0.38|ENSG00000100749|chr14:96846141-96846141|A/T|missense_variant'] 32153 18711 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 78.793 2 -2.0203473767592834 0.44757744672990624 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 12975 10895 DLPPGVAL True NCI_RA007_Epitope_Rep3 780.43815477776 780.43704993586 49.929 2 -2.020348397160023 0.44757744672990624 1.0 ['ENST00000484749.5_1_1:228360905-228363211:+|nuORF', 'ENST00000546123.2_1_1:228362303-228363211:+|nuORF', 'ENSG00000181873|ENST00000366711|IBA57'] 120475 11978 VFVLPFPV True NCI_RA007_Epitope_Rep5 916.5422259234799 916.54112993586 52.733 2 -2.020449774615752 0.44757744672990624 1.0 ['ENST00000370490.1_1_X:144906531-144906621:+|nuORF'] 92339 22718 RQNWPEDKRRY True PC9_epitope_Rep3 1546.7753071579798 1546.7736749037902 92.652 3 -2.0205986773298994 0.44757744672990624 1.0 ['nc|ENSG00000122008|Q9UBT6-8|POLK', 'ENSG00000122008|ENST00000241436|POLK', 'nc|ENSG00000122008|Q9UBT6-7|POLK', 'nc|ENSG00000122008|Q9UBT6-4|POLK', 'nc|ENSG00000122008|Q9UBT6-6|POLK', 'nc|ENSG00000122008|Q9UBT6-2|POLK', 'nc|ENSG00000122008|Q9UBT6-5|POLK', 'nc|ENSG00000122008|Q9UBT6-3|POLK', 'ENST00000508867.5_1_5:74842847-74877278:+|nuORF', 'ENST00000506928.5_1_5:74842847-74879138:+|nuORF'] 15215 7749 EAFRGITDEK True PC9_epitope_Rep3 1164.5775017848798 1164.57640993586 34.8 2 -2.0206218563809424 0.44757744672990624 1.0 ['MBL2|p.L184R|1|0.46|ENSG00000165471|chr10:52768333-52768333|A/C|missense_variant'] 57827 23456 LEPRSLRT True PC9_epitope_Rep5 970.5559784946599 970.5554349679301 95.207 1 -2.020683398817322 0.44757744672990624 1.0 ['nc|ENSG00000183914|Q9P225-3|DNAH2', 'ENST00000607376.1_1_8:144372580-144372646:-|nuORF'] 127894 12598 VRPGNGGK True NCI_RA007_Epitope_Rep3 783.4351350859899 783.4340299358599 56.799 2 -2.020707195732104 0.44757744672990624 1.0 ['ENST00000300403.10_1_20:30327209-30327416:+|nuORF'] 101043 24825 SLTLLRKKVW True H1975_Epitope_Rep2 1242.7812274022199 1242.77959490379 102.05 3 -2.020718804651261 0.44757744672990624 1.0 ['ENST00000508678.1_1_5:14681688-14687767:+|nuORF'] 9515 21132 AWRVIENP True PC9_epitope_Rep5 983.5188647099499 983.5183149679301 86.345 1 -2.0207208646735846 0.44757744672990624 1.0 ['GRB7|p.G382W|1|0.45|ENSG00000141738|chr17:39745473-39745473|G/T|missense_variant'] 37407 16572 GVYRNPAFFF True PC9_epitope_Rep6 1216.6029286870796 1216.60182993586 76.185 2 -2.020875809685807 0.4475845883043223 1.0 ['ENST00000569939.5_2_16:10481277-10522815:+|nuORF'] 92693 22172 RRHKHRPAPRL True PC9_epitope_Rep3 1422.85450096854 1422.85340993586 90.569 2 -2.02088007449719 0.4475845883043223 1.0 ['ENST00000451963.1_2_7:99818153-99818871:+|nuORF', 'ENSG00000213413|ENST00000699088|PVRIG', 'nc|ENSG00000213413|Q6DKI7|PVRIG'] 63085 14884 LNMDVKVSYK True NCI_RA007_Epitope_Rep5 1195.6270948295899 1195.6265749679299 63.921 1 -2.0209695287717815 0.4475845883043223 1.0 ['CON__Q1A7A4'] 94534 4227 RYIKWPQR True NCI_RA007_Epitope_Rep4 1145.6457965585698 1145.64415490379 22.573 3 -2.0212570010242312 0.44760145596783835 1.0 ['ENST00000404600.2_1_6:1514778-1515111:-|nuORF'] 32436 15320 GGGVTSGQ True NCI_RA007_Epitope_Rep2 661.3031178569299 661.30256496793 64.286 1 -2.0217373774932836 0.44760745795123646 1.0 ['ENST00000415783.6_1_2:70475644-70475788:-|nuORF'] 10243 6191 CFIYLSKPGQW True PC9_epitope_Rep6 1340.6587293110397 1340.65762993586 32.269 2 -2.022075201682035 0.4476243249997284 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 30045 25003 FYKKKYRVGNS True PC9_epitope_Rep2 1388.7564692063597 1388.75536993586 101.84 2 -2.0226033708124835 0.44768092480524985 1.0 ['ENST00000256497.8_1_3:5261359-5261473:+|nuORF'] 91777 24969 RPKTIRQRH True PC9_epitope_Rep5 1190.71085642662 1190.7097499358601 101.22 2 -2.0227474885589647 0.44768092480524985 1.0 ['ENST00000605810.1_1_3:70174691-70175321:-|nuORF'] 33008 3653 GIVYFYAA True PC9_epitope_Rep4 902.4538048418999 902.45270993586 20.173 2 -2.022788383290871 0.44768092480524985 1.0 ['ENST00000401003.3_1_12:69126449-69133516:+|nuORF'] 75279 12133 NPRGCKSI True PC9_epitope_Rep5 873.44907089797 873.44796993586 51.659 2 -2.0228444827053558 0.44768092480524985 1.0 ['nc|ENSG00000185480|Q9NWS1-6|PARPBP'] 56022 24664 LDKFYKRK True H1975_Epitope_Rep2 1096.6393141958 1096.63820993586 101.43 2 -2.0230608333660913 0.44768692553399536 1.0 ['ENSG00000156502|ENST00000359655|SUPV3L1', 'SUPV3L1|p.F536Lfs*2|1|0.32|ENSG00000156502|chr10:69202871-69202871|T/-|frameshift_variant'] 124433 24214 VLENRDHYG True PC9_epitope_Rep5 1101.52032126193 1101.5197749679298 98.143 1 -2.02343822386184 0.44769406268672934 1.0 ['ENST00000521189.1_1_8:62212560-62289213:+|nuORF', 'nc|ENSG00000177182|Q8IUQ0-2|CLVS1', 'ENSG00000177182|ENST00000325897|CLVS1'] 73720 23483 NGTVSCPHC True H1975_Epitope_Rep1 916.3531219078 916.35202993586 97.579 2 -2.023448172838832 0.44769406268672934 1.0 ['ENSG00000106948|ENST00000374088|AKNA', 'nc|ENSG00000106948|Q7Z591-7|AKNA', 'nc|ENSG00000106948|Q7Z591-2|AKNA', 'nc|ENSG00000106948|Q7Z591-4|AKNA', 'nc|ENSG00000106948|Q7Z591-5|AKNA', 'nc|ENSG00000106948|Q7Z591-8|AKNA'] 136062 18061 YFWAMGQE True PC9_epitope_Rep5 1030.4218530906196 1030.4207499358602 74.485 2 -2.023536066464965 0.44769406268672934 1.0 ['nc|ENSG00000070985|Q9NZQ8-2|TRPM5', 'ENSG00000070985|ENST00000696290|TRPM5', 'nc|ENSG00000070985|Q9NZQ8-3|TRPM5'] 72604 6383 MVSMLDRDMSG True H1975_Epitope_Rep3 1240.52501491316 1240.52390993586 29.529 2 -2.023859893081223 0.4477237423826025 1.0 ['nc|ENSG00000075142|P30626-3|SRI', 'nc|ENSG00000075142|P30626-2|SRI', 'ENSG00000075142|ENST00000265729|SRI', 'ENST00000486860.5_1_7:87838471-87849341:-|nuORF'] 133936 22249 WPCCAGRL True PC9_epitope_Rep4 904.4047635578398 904.40366993586 93.819 2 -2.023884870427 0.4477237423826025 1.0 ['ENST00000515183.5_1_4:2826457-2831225:+|nuORF'] 54398 15477 KYREGKYRRYH True H1975_Epitope_Rep3 1554.81677804714 1554.81568993586 64.95 2 -2.02388550538051 0.4477237423826025 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF'] 130387 22087 VTVLLGTT True H1975_Epitope_Rep2 802.4800195897401 802.47892993586 91.294 2 -2.0238869577279246 0.4477237423826025 1.0 ['URI1|p.D102Tfs*13|1|0.29|ENSG00000105176|chr19:29986350-29986350|G/-|frameshift_variant'] 32919 26252 GIPHPPYIWK True PC9_epitope_Rep4 1206.65496425994 1206.65386993586 111.31 2 -2.0242636937580865 0.4477237423826025 1.0 ['ENST00000433809.1_1_6:30523661-30523859:-|nuORF'] 127942 17567 VRPLPWQMC True NCI_RA007_Epitope_Rep3 1128.55724144796 1128.55614993586 77.062 2 -2.0242739474632305 0.4477237423826025 1.0 ['ENST00000316881.8_1_17:54966994-54967120:-|nuORF'] 114513 24322 TSGKAVGVAVA True H1975_Epitope_Rep3 958.5447451046198 958.54364993586 101.29 2 -2.024445024388646 0.4477237423826025 1.0 ['nc|ENSG00000074370|Q93084-4|ATP2A3', 'ENSG00000074370|ENST00000397041|ATP2A3', 'nc|ENSG00000074370|Q93084-3|ATP2A3', 'nc|ENSG00000074370|Q93084-7|ATP2A3', 'nc|ENSG00000074370|Q93084-1|ATP2A3', 'nc|ENSG00000074370|Q93084-6|ATP2A3', 'nc|ENSG00000074370|Q93084-5|ATP2A3'] 132410 24580 VYNKKENLKK True NCI_RA007_Epitope_Rep5 1262.7346711326197 1262.73356993586 102.02 2 -2.0245630327285555 0.4477237423826025 1.0 ['ENST00000286122.11_1_16:88110485-88110638:+|nuORF'] 133669 17566 WKVGALGP True PC9_epitope_Rep4 826.4701236123799 826.46902993586 75.586 2 -2.024915667009197 0.4477237423826025 1.0 ['ENST00000295984.7_1_3:9991698-9994018:-|nuORF'] 23396 21986 EVVEKQFD True NCI_RA007_Epitope_Rep3 992.4814761417198 992.48036993586 95.519 2 -2.0249219201872513 0.4477237423826025 1.0 ['nc|ENSG00000132972|Q9BXT8-2|RNF17', 'nc|ENSG00000132972|Q9BXT8-1|RNF17', 'nc|ENSG00000132972|Q9BXT8-4|RNF17', 'nc|ENSG00000132972|Q9BXT8-5|RNF17', 'ENSG00000132972|ENST00000255324|RNF17'] 129487 9981 VTETSMQKEI True PC9_epitope_Rep1 1164.5696395231198 1164.5685499358601 43.256 2 -2.024937626749262 0.4477237423826025 1.0 ['ENST00000561186.5_2_15:59323620-59323680:+|nuORF'] 43468 4934 IHTDVQTK True PC9_epitope_Rep6 940.4977949122001 940.49668993586 26.546 2 -2.025089965977471 0.4477237423826025 1.0 ['ENSG00000161048|ENST00000465647|NAPEPLD', 'ENST00000414118.2_1_7:102743878-102755668:-|nuORF'] 106010 6022 SVLMRRDSDSE True PC9_epitope_Rep5 1293.5983138824502 1293.59665490379 28.157 3 -2.025118852397099 0.4477237423826025 1.0 ['ENST00000489621.1_1_3:101431822-101432032:+|nuORF'] 89952 20165 RFYPEIRF True NCI_RA007_Epitope_Rep5 1126.5923640033798 1126.59126993586 84.511 2 -2.0251995375691583 0.4477237423826025 1.0 ['ENST00000488164.5_1_9:74978812-74978980:-|nuORF'] 120713 21807 VGARVRPRATW True H1975_Epitope_Rep1 1267.7261721375899 1267.7250699358601 90.647 2 -2.0257149319773187 0.44777918988496757 1.0 ['ENSG00000124098|ENST00000371384|FAM210B'] 83998 4789 QEMPIPFKI True H1975_Epitope_Rep3 1101.58925276889 1101.5881499358602 23.548 2 -2.025748981707475 0.44777918988496757 1.0 ['ENSG00000138075|ENST00000405322|ABCG5', 'nc|ENSG00000138075|Q9H222-2|ABCG5'] 52252 18388 KNKNQKQVRS True NCI_RA007_Epitope_Rep3 1228.7000169594 1228.6983749037902 80.516 3 -2.025879808539559 0.447785188242706 1.0 ['ENST00000534968.5_1_1:160514984-160515056:-|nuORF'] 6684 19794 AQAPFGGF True PC9_epitope_Rep4 793.3758888743699 793.37534496793 84.263 1 -2.0263568561406853 0.4478020485971563 1.0 ['ENSG00000184254|ENST00000329841|ALDH1A3'] 80056 22971 PKGKMIPVLH True PC9_epitope_Rep3 1118.6634207686598 1118.66232993586 93.623 2 -2.026428274013053 0.4478091803706037 1.0 ['ENSG00000106341|ENST00000342032|PPP1R17', 'nc|ENSG00000106341|O96001-2|PPP1R17'] 90962 22680 RLHELRVLTA True PC9_epitope_Rep4 1206.71968977482 1206.7180349037899 95.47 3 -2.0266820802236793 0.4478091803706037 1.0 ['ENSG00000161179|ENST00000292778|YDJC', 'ENST00000468686.5_1_22:21982709-21983718:-|nuORF'] 32424 7235 GGGREACH True NCI_RA007_Epitope_Rep1 785.3238703848499 785.32332496793 32.133 1 -2.0267780755526967 0.4478091803706037 1.0 ['ENST00000235307.6_1_1:184356254-184446568:+|nuORF'] 121387 25290 VGHSAGHP True PC9_epitope_Rep1 760.36163579256 760.36052993586 102.18 2 -2.026940085076258 0.4478174452324836 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 55474 24472 LAVFYTIFTL True NCI_RA007_Epitope_Rep1 1186.66379760814 1186.6627099358602 101.39 2 -2.0270190043230008 0.4478174452324836 1.0 ['ENSG00000169488|ENST00000305051|OR4K15'] 82615 18212 PVKTNSSLY True PC9_epitope_Rep3 1007.5287606873101 1007.52766993586 75.265 2 -2.027027624296904 0.4478174452324836 1.0 ['ENST00000222690.10_1_7:44866953-44867181:-|nuORF'] 63865 4164 LPVAVNEQT True PC9_epitope_Rep5 969.5131106231701 969.51200993586 21.09 2 -2.0270305962085264 0.4478174452324836 1.0 ['nc|ENSG00000166889|Q86TB9-4|PATL1', 'ENSG00000166889|ENST00000300146|PATL1'] 72832 19277 NALERVPSGLP True PC9_epitope_Rep4 1151.6298717109098 1151.6287699358602 82.254 2 -2.0270948178006956 0.4478174452324836 1.0 ['ENSG00000174348|ENST00000312553|PODN', 'nc|ENSG00000174348|Q7Z5L7-2|PODN', 'nc|ENSG00000174348|Q7Z5L7-3|PODN', 'nc|ENSG00000174348|Q7Z5L7-4|PODN'] 36030 14817 GVDPSGQG True NCI_RA007_Epitope_Rep4 715.31368254063 715.3131349679301 64.455 1 -2.0274573520707952 0.44782943968372924 1.0 ['ENST00000318876.9_1_14:73437074-73437530:-|nuORF'] 64716 3907 LRNKFAQKMLQ True PC9_epitope_Rep3 1375.7758247519498 1375.77418490379 20.132 3 -2.027489895383278 0.44782943968372924 1.0 ['ENST00000411964.2_1_1:110194089-110194182:+|nuORF'] 25077 7901 FDFKTGQIDRR True NCI_RA007_Epitope_Rep3 1381.7102472899298 1381.70914993586 38.191 2 -2.027743640336709 0.4478642874985067 1.0 ['ENSG00000187535|ENST00000426508|IFT140', 'ENST00000439987.6_1_16:1604037-1657279:-|nuORF', 'ENST00000565298.5_1_16:1576517-1634259:-|nuORF'] 80057 23061 PKGKMIPVLH True PC9_epitope_Rep3 1118.6634207686598 1118.66232993586 93.972 2 -2.027840394481569 0.4478642874985067 1.0 ['ENSG00000106341|ENST00000342032|PPP1R17', 'nc|ENSG00000106341|O96001-2|PPP1R17'] 129658 17612 VTHYVTSS True PC9_epitope_Rep2 892.4290466460401 892.4279499358599 73.022 2 -2.0280236213456755 0.4478642874985067 1.0 ['HFE|p.H215Y|1|0.26|ENSG00000010704|chr6:26092711-26092711|C/T|missense_variant'] 86041 20860 QPLHKARR True H1975_Epitope_Rep2 1004.5991807193199 1004.59808993586 86.373 2 -2.028102322756981 0.4478642874985067 1.0 ['ENST00000417220.6_1_3:51978121-51978467:+|nuORF'] 44828 12060 IPVYLEIV True H1975_Epitope_Rep3 944.5582699104399 944.55716993586 51.55 2 -2.028528015293832 0.4478762801507401 1.0 ['nc|ENSG00000107736|Q9H251-4|CDH23', 'nc|ENSG00000107736|Q9H251-2|CDH23', 'nc|ENSG00000107736|Q9H251-3|CDH23', 'ENSG00000107736|ENST00000224721|CDH23', 'nc|ENSG00000107736|Q9H251-8|CDH23', 'nc|ENSG00000107736|Q9H251-9|CDH23', 'nc|ENSG00000107736|Q9H251-7|CDH23'] 59354 6520 LGKPGRIQ True PC9_epitope_Rep1 867.52903547083 867.52792993586 29.882 2 -2.028537976051439 0.4478762801507401 1.0 ['nc|ENSG00000103168|Q15572-2|TAF1C', 'ENSG00000103168|ENST00000566732|TAF1C', 'nc|ENSG00000103168|Q15572|TAF1C', 'ENST00000566903.5_1_16:84212549-84216700:-|nuORF', 'ENST00000564208.5_1_16:84215181-84220577:-|nuORF', 'ENST00000537450.5_1_16:84215181-84219087:-|nuORF', 'ENST00000564774.5_1_16:84215181-84218621:-|nuORF', 'ENST00000544090.5_1_16:84215181-84217023:-|nuORF'] 32154 18945 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 79.71 2 -2.028988747137115 0.4478796763859478 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 121049 7970 VGFLVPRK True NCI_RA007_Epitope_Rep3 914.5701720068199 914.5690699358599 38.453 2 -2.0290456642417283 0.4478796763859478 1.0 ['NRSN1|p.P88R|1|0.07|ENSG00000152954|chr6:24145621-24145621|C/G|missense_variant'] 40948 21347 HWKGHEHS True H1975_Epitope_Rep2 1016.45766143572 1016.45656993586 88.33 2 -2.029098156436137 0.4478796763859478 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 7309 18201 ARRQQKLNKQQ True NCI_RA007_Epitope_Rep4 1396.801127983 1396.80002993586 78.762 2 -2.029266812052215 0.4478796763859478 1.0 ['nc|ENSG00000081803|Q86UW7-3|CADPS2', 'nc|ENSG00000081803|Q86UW7-2|CADPS2', 'ENSG00000081803|ENST00000449022|CADPS2', 'CADPS2|p.E124Nfs*14|1|0.15|ENSG00000081803|chr7:122737039-122737039|T/-|frameshift_variant', 'CADPS2|p.E331Nfs*7|1|0.22|ENSG00000081803|chr7:122621594-122621594|C/-|frameshift_variant'] 130865 25354 VVGPRKRRW True PC9_epitope_Rep3 1152.6992291137599 1152.6981299358602 102.94 2 -2.029364925451587 0.4478796763859478 1.0 ['ENST00000373043.1_2_1:38273978-38274170:+|nuORF'] 120703 23199 VGARGPRRRR True PC9_epitope_Rep2 1179.7173387893897 1179.71677496793 94.718 1 -2.0293695868896373 0.4478796763859478 1.0 ['ENST00000370210.3_2_X:152736080-152736602:-|nuORF'] 121535 22593 VGKLRLREV True H1975_Epitope_Rep2 1068.6767623336798 1068.67566993586 93.341 2 -2.029888324894066 0.44793996915926415 1.0 ['ENST00000586768.1_1_16:4574125-4574218:-|nuORF'] 121915 5724 VGPPAGPR True NCI_RA007_Epitope_Rep3 749.41842239269 749.41732993586 29.491 2 -2.0299686134237676 0.4479568234387047 1.0 ['ENST00000348335.6_1_17:3788988-3796337:-|nuORF'] 109473 5459 TGVPHPGP True NCI_RA007_Epitope_Rep4 760.3867879112399 760.38568993586 27.581 2 -2.0300920265370146 0.44796247434769865 1.0 ['ENST00000319119.4_1_9:129642901-129642961:+|nuORF'] 111473 11830 TLLHFDASFF True PC9_epitope_Rep3 1196.5866099165999 1196.58496490379 50.524 3 -2.0302974210576252 0.44796247434769865 1.0 ['ENSG00000148248|ENST00000371989|SURF4'] 118668 6996 VEAQNGSES True H1975_Epitope_Rep2 919.3883040328699 919.38775496793 31.834 1 -2.0304006829553343 0.44796247434769865 1.0 ['ENST00000375206.6_1_9:100008408-100053768:+|nuORF', 'ENST00000375204.2_1_9:100008408-100054866:+|nuORF', 'ENST00000527128.5_1_9:100008408-100053855:+|nuORF'] 36213 19649 GVGAGHGG True PC9_epitope_Rep6 610.2823228427 610.28177496793 88.238 1 -2.030463935404875 0.44796247434769865 1.0 ['nc|ENSG00000167644|Q9GZP8-2|IMUP', 'ENSG00000167644|ENST00000301246|C19orf33', 'ENST00000589986.2_1_19:38794923-38795601:+|nuORF'] 121729 21682 VGLRGHAAA True PC9_epitope_Rep5 850.47733425114 850.47622993586 88.447 2 -2.0306837827127255 0.44796247434769865 1.0 ['ENST00000478796.5_1_1:45798697-45798943:-|nuORF'] 32532 24489 GGSGGGGA True H1975_Epitope_Rep1 518.2084891961 518.2079449679301 101.5 1 -2.030751586760395 0.44796247434769865 1.0 ['ENSG00000145191|ENST00000648915|EIF2B5', 'ENST00000481054.5_1_3:183853173-183856676:+|nuORF', 'ENST00000336865.6_1_12:109535932-109536052:+|nuORF', 'ENST00000491144.5_1_3:183853173-183855624:+|nuORF', 'nc|ENSG00000134046|Q9UBB5-3|MBD2', 'ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-5|TRIO', 'ENST00000515144.5_1_5:14293150-14488426:+|nuORF', 'ENSG00000134046|ENST00000256429|MBD2', 'ENSG00000180998|ENST00000321662|GPR137C'] 37868 7067 HDYELRVLCCE True NCI_RA007_Epitope_Rep2 1378.6009567347398 1378.5998499358602 32.113 2 -2.030806100220876 0.44796247434769865 1.0 ['ENSG00000117983|ENST00000529681|MUC5B', 'MUC5B|p.S3673Afs*24|1|0.28|ENSG00000117983|chr11:1247893-1247893|C/-|frameshift_variant'] 83845 14883 QEGCTKGK True H1975_Epitope_Rep1 849.4014519992098 849.40090496793 62.482 1 -2.0309200626884594 0.44796247434769865 1.0 ['nc|ENSG00000110172|Q9UHD1-2|CHORDC1', 'ENSG00000110172|ENST00000320585|CHORDC1'] 26877 23429 FLFFILVAVR True PC9_epitope_Rep2 1223.7430509883498 1223.74141490379 95.592 3 -2.0312180700142672 0.44796247434769865 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'ENST00000526885.5_1_19:1041282-1042570:+|nuORF', 'ENST00000525238.2_1_19:1041360-1041637:+|nuORF', 'ENST00000527496.1_1_19:1041282-1041972:+|nuORF'] 3346 9184 AGHLPSSSP True PC9_epitope_Rep3 851.4137309350701 851.41262993586 40.265 2 -2.0312182203930207 0.44796247434769865 1.0 ['ENST00000395648.7_2_11:44955194-44955650:-|nuORF'] 92093 16217 RPVSQPCC True NCI_RA007_Epitope_Rep3 888.3945927969598 888.39348993586 71.48 2 -2.031280461656453 0.4479793263697366 1.0 ['nc|ENSG00000117407|Q5T4W7-2|ARTN', 'ENSG00000117407|ENST00000372359|ARTN', 'nc|ENSG00000117407|Q5T4W7-3|ARTN', 'chr1:43935716-43936069|466|17.31|0.94|4.2|+|ENST00000498139|ARTN,ARTN'] 10240 6618 CFIYLSKPGQW True PC9_epitope_Rep4 1340.6587293110397 1340.65762993586 32.616 2 -2.031589367769019 0.447983844700671 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 79296 22189 PGKAPRYL True H1975_Epitope_Rep2 900.5181364339599 900.51702993586 91.703 2 -2.03159271356388 0.447983844700671 1.0 ['nc|ENSG00000211639|A0A075B6I1|IGLV4-60'] 21722 9809 ESADLPPEGF True PC9_epitope_Rep1 1060.4713053808398 1060.4707749679299 42.593 1 -2.0316643732785056 0.447983844700671 1.0 ['ENSG00000163491|ENST00000691995|NEK10', 'nc|ENSG00000163491|Q6ZWH5|NEK10', 'nc|ENSG00000163491|Q6ZWH5-7|NEK10', 'ENST00000574215.5_1_3:27203940-27332977:-|nuORF', 'nc|ENSG00000163491|Q6ZWH5-6|NEK10', 'nc|ENSG00000163491|Q6ZWH5-5|NEK10'] 89765 27450 RFCHHQAC True PC9_epitope_Rep1 1000.4119741966 1000.41086993586 112.28 2 -2.0317891416204215 0.447983844700671 1.0 ['L1PA3_dup5927|chr9:65306104-65312178:+|1.038066655224851|0.3372797959799246|1.62|479.0|115|3|sense', 'L1PA3_dup945|chr2:55736330-55742393:-|1.0641318038252257|0.0563046554602253|4.24|482.0|121|3|sense', 'L1PA3_dup5540|chr8:107240609-107246613:+|1.5135165255506606|0.0749513500708071|4.34|470.0|130|3|sense', 'L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|103|2|sense', 'L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|150|3|sense', 'L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|123|3|sense', 'L1PA2_dup219|chr1:174843227-174849243:-|1.455246509855887|0.4502185352130829|1.69|495.0|21|1|sense', 'L1HS_dup1616|chr22:28663284-28669315:+|1.1085898246764976|0.2468976263073953|2.17|498.0|119|3|sense'] 126402 13029 VPLILFLC True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 57.219 2 -2.0318823792488026 0.447983844700671 1.0 ['nc|ENSG00000091129|Q92823-4|NRCAM', 'nc|ENSG00000091129|Q92823-3|NRCAM', 'nc|ENSG00000091129|Q92823-6|NRCAM', 'nc|ENSG00000091129|Q92823-2|NRCAM', 'ENSG00000091129|ENST00000379028|NRCAM', 'nc|ENSG00000091129|Q92823-5|NRCAM', 'NRCAM|p.P209Qfs*28|1|0.52|ENSG00000091129|chr7:108226303-108226303|G/-|frameshift_variant'] 99043 15831 SKTSGKAK True H1975_Epitope_Rep3 805.4657665079299 805.46466993586 66.342 2 -2.031909004252425 0.447983844700671 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 78961 18008 PFHEEFES True NCI_RA007_Epitope_Rep5 1020.4188758851599 1020.41776993586 76.064 2 -2.032060402330424 0.447983844700671 1.0 ['nc|ENSG00000038427|P13611-5|VCAN', 'ENSG00000038427|ENST00000265077|VCAN', 'nc|ENSG00000038427|P13611-2|VCAN', 'ENST00000513016.5_1_5:82832752-82876250:+|nuORF'] 137486 17531 YLPPFFLL True NCI_RA007_Epitope_Rep5 1008.56844067132 1008.56787496793 74.222 1 -2.0320684149159307 0.447983844700671 1.0 ['ENST00000399075.6_1_4:120219277-120219328:-|nuORF'] 37693 24607 HALSDCGD True NCI_RA007_Epitope_Rep5 816.3072172612 816.30610993586 102.12 2 -2.0323064056769202 0.4479898379059138 1.0 ['ENSG00000172172|ENST00000306185|MRPL13'] 67187 12806 LTDHVVPL True PC9_epitope_Rep5 892.50181766348 892.50072993586 54.269 2 -2.0324287971183983 0.4479958309810223 1.0 ['nc|ENSG00000057593|P08709|F7', 'ENSG00000057593|ENST00000346342|F7', 'ATP11A-F7|1|fusion'] 38051 20854 HELHLYKHEQI True NCI_RA007_Epitope_Rep2 1445.74154741821 1445.7404499358602 86.249 2 -2.032504723334227 0.44800182392600074 1.0 ['ENST00000557001.5_1_14:52037074-52042621:+|nuORF', 'ENST00000557103.5_1_14:52042417-52042621:+|nuORF'] 22897 16013 EVFAKVLR True PC9_epitope_Rep2 960.5756513100799 960.57454993586 66.848 2 -2.032630547753823 0.4480078167408533 1.0 ['ENSG00000062725|ENST00000083182|APPBP2', 'ENST00000590244.1_1_17:58543761-58603427:-|nuORF'] 120894 14289 VGDYGSLS True PC9_epitope_Rep3 796.36029837988 796.35920993586 60.05 2 -2.0326517466061014 0.44801380942558433 1.0 ['ENST00000488395.1_1_20:57572656-57581383:-|nuORF', 'ENSG00000101160|ENST00000217131|CTSZ'] 99850 25075 SLHDAHLL True PC9_epitope_Rep2 904.4766655448 904.47556993586 102.12 2 -2.032848043695078 0.4480149381737648 1.0 ['ENSG00000182308|ENST00000333141|DCAF4L1'] 121536 9797 VGKLVTLR True NCI_RA007_Epitope_Rep5 884.58073669052 884.57962993586 44.332 2 -2.03289140574422 0.4480149381737648 1.0 ['nc|ENSG00000064607|Q8IX01-4|SUGP2', 'nc|ENSG00000064607|Q8IX01-3|SUGP2', 'ENSG00000064607|ENST00000452918|SUGP2'] 121051 12042 VGFLVPRK True PC9_epitope_Rep1 914.5701720068199 914.5690699358599 51.179 2 -2.0331925948789973 0.44802692286815393 1.0 ['NRSN1|p.P88R|1|0.07|ENSG00000152954|chr6:24145621-24145621|C/G|missense_variant'] 117654 22327 VAIPLVLLVVL True H1975_Epitope_Rep3 1147.79441785487 1147.7933299358601 93.35 2 -2.033230316767074 0.44802692286815393 1.0 ['ENST00000478345.1_1_6:117862091-117866721:+|nuORF', 'nc|ENSG00000164465|Q8N8Z6-2|DCBLD1', 'ENSG00000164465|ENST00000338728|DCBLD1'] 122682 11479 VGTSFGLP True H1975_Epitope_Rep1 776.4068546494799 776.40574993586 49.137 2 -2.0335182471538795 0.448028051282608 1.0 ['ALDH2-LRBA|3|fusion', 'ALDH2-LRBA|4|fusion', 'ALDH2-LRBA|1|fusion', 'ALDH2-LRBA|2|fusion', 'ENST00000503716.5_1_4:151186876-151502511:-|nuORF', 'nc|ENSG00000198589|P50851-2|LRBA', 'ENSG00000198589|ENST00000651943|LRBA', 'nc|ENSG00000198589|P50851|LRBA'] 131215 25748 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 109.01 2 -2.033754938321361 0.448028051282608 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 130641 15563 VVANVPLG True NCI_RA007_Epitope_Rep3 767.45413919507 767.45304993586 68.781 2 -2.033819773337479 0.4480303079645249 1.0 ['nc|ENSG00000172845|Q02447-6|SP3', 'nc|ENSG00000172845|Q02447-2|SP3', 'ENSG00000172845|ENST00000310015|SP3', 'nc|ENSG00000172845|Q02447-5|SP3'] 79720 25055 PHQKLRAK True NCI_RA007_Epitope_Rep5 976.5930327097199 976.59192993586 103.88 2 -2.034095665884934 0.4480303079645249 1.0 ['nc|ENSG00000186153|Q9NZC7-7|WWOX'] 134990 24578 YAGFHVAL True PC9_epitope_Rep3 876.4493881678 876.44828993586 99.9 2 -2.0341131877484258 0.4480303079645249 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 71485 19655 MKKYLQFVAA True PC9_epitope_Rep5 1197.65800103505 1197.65690993586 80.66 2 -2.0341660226579057 0.4480303079645249 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP', 'TRRAP|p.G312Efs*21|1|0.18|ENSG00000196367|chr7:98903415-98903415|G/-|frameshift_variant'] 37406 23643 GVYPVKGASGY True PC9_epitope_Rep3 1096.5553097883198 1096.5542099358602 96.23 2 -2.034383304868355 0.44803968391802707 1.0 ['nc|ENSG00000172687|Q8NE65-2|ZNF738', 'ENSG00000172687|ENST00000683779|ZNF738'] 49144 22960 KGKKEREL True PC9_epitope_Rep5 986.5872786229398 986.58618993586 93.305 2 -2.034526907803132 0.44803968391802707 1.0 ['ENST00000418474.1_1_2:160472985-160473165:+|nuORF'] 92986 24008 RRQRQRQW True PC9_epitope_Rep5 1212.6700542437998 1212.6689499358602 97.33 2 -2.034556195019543 0.44803968391802707 1.0 ['ENST00000247706.3_1_19:17411946-17414055:-|nuORF'] 32612 20104 GHFCLCPL True NCI_RA007_Epitope_Rep3 888.39861554824 888.39750993586 87.604 2 -2.034757317710777 0.44803968391802707 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 133457 18264 WGLAAGGG True H1975_Epitope_Rep2 687.33402406239 687.3334749679301 75.721 1 -2.0347820371563325 0.44803968391802707 1.0 ['nc|ENSG00000183688|Q8N5W9|RFLNB'] 101728 13965 SPGTRSKA True NCI_RA007_Epitope_Rep5 802.42971535238 802.4291649679301 60.4 1 -2.0348497552544345 0.44803968391802707 1.0 ['ENSG00000101203|ENST00000358894|COL20A1', 'nc|ENSG00000101203|Q9P218-2|COL20A1', 'nc|ENSG00000101203|Q9P218-3|COL20A1', 'ENST00000471582.5_1_20:61956720-61961007:+|nuORF', 'ENST00000479501.5_1_20:61950534-61961007:+|nuORF'] 28679 6341 FSSSLPYPNNL True NCI_RA007_Epitope_Rep1 1237.59790287629 1237.5968099358602 28.691 2 -2.0348542912625733 0.44803968391802707 1.0 ['nc|ENSG00000104365|O14920-4|IKBKB', 'nc|ENSG00000104365|O14920-2|IKBKB', 'ENSG00000104365|ENST00000520810|IKBKB', 'ENST00000518647.5_1_8:42129618-42174557:+|nuORF', 'ENST00000520201.5_1_8:42129679-42177019:+|nuORF', 'ENST00000342222.6_1_8:42151073-42188494:+|nuORF', 'ENST00000517917.5_1_8:42128977-42177019:+|nuORF'] 55110 25429 LALQYRLRPR True PC9_epitope_Rep1 1284.7778733572798 1284.77676993586 102.79 2 -2.0352369183442116 0.4480535689091955 1.0 ['TBC1D4|p.H939P|2|0.87|ENSG00000136111|chr13:75302338-75302338|T/G|missense_variant'] 22707 8115 ETVSGYEAK True H1975_Epitope_Rep3 982.4607406971398 982.4596499358599 36.19 2 -2.035285324030337 0.4480535689091955 1.0 ['nc|ENSG00000172932|Q6ZTN6-1|ANKRD13D', 'ENSG00000172932|ENST00000511455|ANKRD13D', 'ENST00000508417.5_1_11:67066418-67066817:+|nuORF', 'ENST00000506531.5_1_11:67057839-67066817:+|nuORF'] 138713 8518 YRWLWWQPWWW True NCI_RA007_Epitope_Rep1 1791.8462872702696 1791.84463490379 37.134 3 -2.0354435148584673 0.4480535689091955 1.0 ['chr12:54282820-54283827|502|28.39|0.0|21.44|+|1|HNRNPA1,HNRNPA1|1', 'chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 71179 21958 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 91.597 2 -2.035466080195376 0.4480535689091955 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 125485 20682 VLVGFALY True PC9_epitope_Rep4 880.5058404147599 880.50474993586 87.714 2 -2.0354971752914515 0.4480535689091955 1.0 ['ENST00000523219.1_1_5:159833399-159834623:-|nuORF', 'ENST00000520841.1_1_5:159833399-159835410:-|nuORF'] 101228 9799 SLWAWVERE True NCI_RA007_Epitope_Rep1 1174.5771078620598 1174.5760099358602 42.118 2 -2.0357939384826444 0.4480535689091955 1.0 ['ENST00000489526.1_1_10:102762295-102762823:+|nuORF'] 21027 18211 ERCLHMFL True PC9_epitope_Rep6 1047.49939221867 1047.4982899358602 82.69 2 -2.0359622275010727 0.4480535689091955 1.0 ['nc|ENSG00000112335|O60493-4|SNX3', 'ENSG00000112335|ENST00000230085|SNX3', 'ENST00000483560.1_1_X:70279478-70282733:-|nuORF', 'nc|ENSG00000112335|O60493-2|SNX3', 'nc|ENSG00000147164|Q9UMY4-3|SNX12', 'ENSG00000147164|ENST00000374274|SNX12', 'nc|ENSG00000147164|Q9UMY4-1|SNX12'] 133774 24542 WLPFFIKH True PC9_epitope_Rep2 1086.6014721351 1086.60036993586 100.02 2 -2.0360501528832993 0.4480535689091955 1.0 ['DRD2|p.T392K|1|0.1|ENSG00000149295|chr11:113410884-113410884|G/T|missense_variant'] 74669 12516 NLIAHNRTHTG True PC9_epitope_Rep5 1232.63741670284 1232.63578490379 53.142 3 -2.0362334742082004 0.4480535689091955 1.0 ['ENSG00000122386|ENST00000219091|ZNF205'] 22050 10076 ESRPHALP True H1975_Epitope_Rep2 905.4719145175299 905.4713649679301 43.75 1 -2.0362438031173897 0.4480535689091955 1.0 ['nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4', 'CASS4|p.A264G|2|0.27|ENSG00000087589|chr20:56451967-56451967|C/G|missense_variant'] 85520 13785 QLKKLRST True NCI_RA007_Epitope_Rep5 972.60801406752 972.60690993586 59.7 2 -2.0362694370887136 0.4480535689091955 1.0 ['ENST00000448507.5_1_4:6995977-7000814:+|nuORF'] 19131 5768 ELINEELETFN True NCI_RA007_Epitope_Rep2 1349.63507623065 1349.63396993586 27.053 2 -2.036309761907423 0.4480535689091955 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD'] 69111 11089 LVKVAPKRP True NCI_RA007_Epitope_Rep2 1006.6651350208199 1006.66402993586 47.714 2 -2.0364018312511774 0.4480535689091955 1.0 ['ENSG00000255587|ENST00000612677|RAB44'] 133418 25204 WFWKLVPARYR True PC9_epitope_Rep1 1520.8404736138398 1520.83936993586 101.83 2 -2.036451998896633 0.4480535689091955 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2'] 55559 23926 LCFPRGVA True PC9_epitope_Rep2 861.4530936492499 861.45198993586 97.51 2 -2.036493411157914 0.4480535689091955 1.0 ['ENST00000525619.5_1_8:144772228-144772294:+|nuORF', 'ENST00000526970.5_1_8:144767209-144773249:+|nuORF', 'ENST00000533031.5_1_8:144766681-144773252:+|nuORF'] 69712 21440 LWALGFIF True PC9_epitope_Rep6 965.5374748962099 965.53636993586 95.343 2 -2.0369798492757605 0.44808126410835214 1.0 ['ENSG00000198804|ENST00000361624|MT-CO1'] 87996 15903 QVRVLHHRHHR True PC9_epitope_Rep1 1473.82901449669 1473.8279099358601 65.981 2 -2.037198083759782 0.4481149480172769 1.0 ['ENST00000314222.4_1_11:2949785-2950526:-|nuORF'] 109310 13458 TGGGGGGD True H1975_Epitope_Rep1 576.21396849936 576.2134249679301 56.882 1 -2.037263818136616 0.4481149480172769 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 15869 20448 EDLYPPTAGP True PC9_epitope_Rep4 1058.49204082542 1058.49094993586 86.798 2 -2.037471459901963 0.44813178942342125 1.0 ['ENSG00000102879|ENST00000219150|CORO1A', 'ENST00000567034.5_1_16:30199450-30200005:+|nuORF'] 46501 20435 ITPGLSRLS True PC9_epitope_Rep1 942.54983048506 942.54872993586 83.415 2 -2.037532845200658 0.4481437671597087 1.0 ['ENST00000398998.1_2_21:38610885-38639768:-|nuORF'] 51858 15848 KKLRHLLLPSE True NCI_RA007_Epitope_Rep3 1332.82415484336 1332.8224949037901 69.972 3 -2.0376750223727935 0.4481437671597087 1.0 ['ENST00000201979.2_1_20:30064033-30064156:+|nuORF'] 107849 6429 TARKKKKKK True PC9_epitope_Rep5 1114.7662460444199 1114.76514993586 29.704 2 -2.038198434549334 0.44815799468287126 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 23522 19115 EWPPSWRRWWQ True NCI_RA007_Epitope_Rep2 1612.7687652255597 1612.76766993586 79.214 2 -2.038222453699489 0.44815799468287126 1.0 ['ENST00000514213.6_3_4:76649793-76649898:+|nuORF'] 22730 18469 ETYRQAKER True H1975_Epitope_Rep2 1179.5996342117899 1179.5979749037901 76.643 3 -2.038244954567161 0.44815799468287126 1.0 ['nc|ENSG00000277399|Q6PRD1|GPR179', 'ENSG00000277399|ENST00000616987|GPR179'] 81604 21080 PRNGPGGP True PC9_epitope_Rep1 750.3772858566999 750.37673496793 85.918 1 -2.0384368915902384 0.44815799468287126 1.0 ['ENST00000406902.5_1_22:47073608-47073866:+|nuORF'] 63291 25668 LPATKRIRQ True PC9_epitope_Rep1 1081.6720113064098 1081.6709099358602 103.77 2 -2.03845499442199 0.44815799468287126 1.0 ['ENST00000509378.1_1_4:165110937-165111516:+|nuORF'] 61511 6564 LLFYESDW True PC9_epitope_Rep5 1071.4913125494297 1071.49020993586 30.219 2 -2.03862114643859 0.44815799468287126 1.0 ['ENST00000517439.1_1_8:74893396-74893462:+|nuORF'] 121382 21219 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 88.655 2 -2.038745922496058 0.4481707317073171 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 12268 7702 DISAERSP True PC9_epitope_Rep3 873.4192102383299 873.41810993586 34.621 2 -2.038847244432179 0.4481707317073171 1.0 ['ENSG00000196605|ENST00000397902|ZNF846'] 95779 19030 SDCVTIAT True NCI_RA007_Epitope_Rep5 808.36366950816 808.36256993586 80.055 2 -2.0389575804167737 0.4481707317073171 1.0 ['ENSG00000197353|ENST00000359228|LYPD2'] 43586 17013 IIFVFWREI True H1975_Epitope_Rep3 1221.6910154154898 1221.68935490379 71.035 3 -2.0391039345803366 0.4481707317073171 1.0 ['nc|ENSG00000214787|Q96PG1-3|MS4A4E'] 8775 10227 AVELDSESRY True H1975_Epitope_Rep3 1167.54078192299 1167.53968993586 44.386 2 -2.0393231278448085 0.4481707317073171 1.0 ['ENSG00000158411|ENST00000289359|MITD1', 'MITD1|p.R21L|1|0.17|ENSG00000158411|chr2:99180920-99180920|C/A|missense_variant'] 97498 20239 SGPHAHTS True H1975_Epitope_Rep2 792.35146503168 792.35036993586 83.872 2 -2.0395327624137125 0.4481707317073171 1.0 ['ENST00000527085.1_1_11:1319633-1319792:-|nuORF'] 137606 23368 YLTSGLKVY True H1975_Epitope_Rep1 1042.5698972233 1042.5688099358601 97.126 2 -2.039654905575821 0.4481707317073171 1.0 ['ENSG00000165195|ENST00000333590|PIGA', 'nc|ENSG00000165195|P37287-2|PIGA'] 137017 1150 YKNGIPYAFAF True H1975_Epitope_Rep3 1289.64445914589 1289.64280490379 6.2186 3 -2.039724656068653 0.4481707317073171 1.0 ['ENSG00000165078|ENST00000297770|CPA6'] 15387 4672 EALQRPVA True NCI_RA007_Epitope_Rep5 882.4923156089399 882.49120993586 24.654 2 -2.0397709294586446 0.4481707317073171 1.0 ['ABL1|p.R785Gfs*3|1|0.54|ENSG00000097007|chr9:130884637-130884637|C/-|frameshift_variant', 'ENSG00000097007|ENST00000318560|ABL1', 'nc|ENSG00000097007|P00519-2|ABL1'] 70682 12810 MDKDGYFWFVA True PC9_epitope_Rep1 1377.60635938501 1377.6052699358602 54.148 2 -2.0397958395595737 0.4481707317073171 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 36207 21008 GVFVKRLC True NCI_RA007_Epitope_Rep3 920.5265929426798 920.52548993586 91.427 2 -2.039810995282081 0.4481707317073171 1.0 ['ENSG00000140968|ENST00000268638|IRF8'] 99056 13449 SKVMRSIWWS True NCI_RA007_Epitope_Rep5 1278.65431263694 1278.65320993586 58.417 2 -2.039828679095454 0.4481707317073171 1.0 ['SMCO3|p.T186Hfs*35|1|0.15|ENSG00000179256|chr12:14806125-14806125|T/-|frameshift_variant'] 134986 23194 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 96.477 2 -2.039964416591811 0.4481707317073171 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 34257 16376 GPKRGKHA True NCI_RA007_Epitope_Rep1 849.4933186684499 849.49222993586 67.812 2 -2.0401419649309935 0.44818383023043873 1.0 ['ENSG00000187754|ENST00000298181|SSX7', 'SSX7|p.S155P|1|0.06|ENSG00000187754|chrX:52648264-52648264|A/G|missense_variant', 'nc|ENSG00000290708|Q7RTT3|SSX9P', 'nc|ENSG00000171483|Q7RTT6|SSX6P', 'ENSG00000165583|ENST00000347757|SSX5', 'ENSG00000126752|ENST00000376919|SSX1', 'nc|ENSG00000165583|O60225-2|SSX5', 'ENSG00000268009|ENST00000595689|SSX4', 'ENSG00000269791|ENST00000595235|SSX4B'] 64237 16287 LQKLQQKAHQ True NCI_RA007_Epitope_Rep3 1220.69895433024 1220.6978499358602 71.765 2 -2.0403009927490796 0.44818383023043873 1.0 ['JMY|p.R607H|1|0.21|ENSG00000152409|chr5:79300802-79300802|G/A|missense_variant'] 53299 25025 KTLKIPPE True PC9_epitope_Rep3 924.5644179200399 924.56332993586 101.6 2 -2.0403629886548256 0.44818383023043873 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|30|2|sense'] 84510 17455 QGTKIVCRH True NCI_RA007_Epitope_Rep2 1040.55493294884 1040.55437496793 72.63 1 -2.0403813791580343 0.44818383023043873 1.0 ['ENSG00000068654|ENST00000263857|POLR1A', 'POLR1A|p.A1361Hfs*7|1|0.23|ENSG00000068654|chr2:86033741-86033741|C/-|frameshift_variant'] 94251 10817 RWRRPQQVTH True PC9_epitope_Rep5 1362.73813380362 1362.7370299358602 46.597 2 -2.040445188979591 0.4481898169746021 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.D486Tfs*13|1|0.34|ENSG00000104044|chr15:27983392-27983392|C/-|frameshift_variant'] 59778 24939 LHAAAAAA True PC9_epitope_Rep5 694.37622322754 694.3756749679301 101.1 1 -2.0409370249830694 0.44820853265644833 1.0 ['ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENSG00000125816|ENST00000351817|NKX2-4'] 128509 15089 VSGEFSRAL True PC9_epitope_Rep1 964.4977949121999 964.49668993586 62.858 2 -2.041083578672109 0.44820853265644833 1.0 ['ENSG00000131873|ENST00000254190|CHSY1', 'ENST00000543813.1_1_15:101717595-101728206:-|nuORF'] 49321 22789 KIAFYRRQK True PC9_epitope_Rep6 1208.7142104715597 1208.71310993586 100.75 2 -2.041120209445254 0.44820853265644833 1.0 ['ENSG00000214013|ENST00000318010|GANC'] 14478 23292 DTTEHGHP True NCI_RA007_Epitope_Rep3 892.36750901864 892.36640993586 101.17 2 -2.0411399511559205 0.44820853265644833 1.0 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 99876 10005 SLHKDRPVEP True PC9_epitope_Rep1 1176.6251206836398 1176.62402993586 43.35 2 -2.0414605090615057 0.44820853265644833 1.0 ['ENSG00000244122|ENST00000373426|UGT1A7', 'nc|ENSG00000167165|P19224-2|UGT1A6', 'ENSG00000242515|ENST00000344644|UGT1A10', 'ENSG00000242366|ENST00000373450|UGT1A8', 'ENSG00000241119|ENST00000354728|UGT1A9', 'ENSG00000241635|ENST00000305208|UGT1A1', 'nc|ENSG00000288702|P35503|UGT1A3', 'ENSG00000244474|ENST00000373409|UGT1A4', 'ENST00000450233.1_1_2:234678284-234681202:+|nuORF', 'ENSG00000167165|ENST00000305139|UGT1A6', 'nc|ENSG00000288705|P35504|UGT1A5'] 78716 13429 PEEQLPKT True PC9_epitope_Rep6 940.48656152216 940.48601496793 63.339 1 -2.041465177021198 0.44820853265644833 1.0 ['ENST00000473039.5_1_9:126143713-126520026:-|nuORF', 'nc|ENSG00000119522|Q8TEH3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-7|DENND1A', 'nc|ENSG00000119522|Q8TEH3-6|DENND1A', 'ENSG00000119522|ENST00000394215|DENND1A', 'nc|ENSG00000119522|Q8TEH3-4|DENND1A', 'nc|ENSG00000119522|Q8TEH3-3|DENND1A', 'nc|ENSG00000119522|Q8TEH3-2|DENND1A', 'ENST00000462245.1_1_9:126202450-126219642:-|nuORF', 'ENST00000479305.5_1_9:126200042-126224279:-|nuORF', 'ENST00000497135.5_1_9:126173862-126345492:-|nuORF', 'nc|ENSG00000119522|Q8TEH3-5|DENND1A'] 3544 10790 AGMVYLAG True NCI_RA007_Epitope_Rep2 780.3840110299199 780.3834649679301 46.572 1 -2.0415675689693473 0.44820853265644833 1.0 ['nc|ENSG00000198400|P04629-4|NTRK1', 'nc|ENSG00000198400|P04629-3|NTRK1', 'nc|ENSG00000198400|P04629-2|NTRK1', 'ENSG00000198400|ENST00000524377|NTRK1', 'ENST00000530298.5_1_1:156845639-156851431:+|nuORF'] 97963 24582 SHQVKDLQRRL True PC9_epitope_Rep4 1378.7793299092598 1378.77822993586 103.04 2 -2.041660954564411 0.44820853265644833 1.0 ['nc|ENSG00000163749|Q5M9N0|CCDC158', 'ENSG00000163749|ENST00000682701|CCDC158', 'CCDC158|p.Q380Kfs*14|1|0.3|ENSG00000163749|chr4:76371428-76371428|G/-|frameshift_variant', 'nc|ENSG00000163749|Q5M9N0-3|CCDC158', 'nc|ENSG00000163749|Q5M9N0-2|CCDC158'] 43071 15820 IGHVALRLI True PC9_epitope_Rep4 990.63383489254 990.63272993586 68.776 2 -2.0418358164353436 0.44820853265644833 1.0 ['nc|ENSG00000099991|Q9Y6J0-2|CABIN1', 'ENSG00000099991|ENST00000263119|CABIN1'] 110762 18597 TKKTTTDLKK True NCI_RA007_Epitope_Rep3 1162.6921376142998 1162.69104993586 81.365 2 -2.042148375775506 0.44820853265644833 1.0 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 123754 8442 VIRWFDYLWTN True NCI_RA007_Epitope_Rep2 1511.7561348531897 1511.7550299358602 37.478 2 -2.042351169298109 0.44820853265644833 1.0 ['CNGA2|p.I487Mfs*21|1|0.55|ENSG00000183862|chrX:151743964-151743964|C/-|frameshift_variant', 'ENSG00000183862|ENST00000329903|CNGA2'] 80133 24653 PKKGGAPA True H1975_Epitope_Rep2 724.4231734199599 724.42262496793 101.39 1 -2.0424201770304706 0.44820853265644833 1.0 ['nc|ENSG00000163431|P29536-2|LMOD1', 'ENSG00000163431|ENST00000367288|LMOD1'] 80031 17518 PKGKCIRV True NCI_RA007_Epitope_Rep5 899.5374919795499 899.53638993586 74.172 2 -2.042436962757044 0.44820853265644833 1.0 ['HNRNPR-E2F2|2|fusion', 'HNRNPR-E2F2|1|fusion', 'ENSG00000007968|ENST00000361729|E2F2'] 25903 25157 FGKVKVGK True NCI_RA007_Epitope_Rep1 861.5436229058098 861.54252993586 104.1 2 -2.042500339685025 0.44820853265644833 1.0 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000511248.1_1_5:40777545-40798228:-|nuORF', 'ENST00000397006.2_1_5:40777312-40798264:-|nuORF'] 49289 23219 KHLKTLPMVP True PC9_epitope_Rep1 1162.6896355165 1162.68799490379 94.111 3 -2.042793368527152 0.4482433209315443 1.0 ['ENSG00000138075|ENST00000405322|ABCG5'] 18211 23149 EIRKENKREKR True PC9_epitope_Rep1 1484.85355747868 1484.8524699358602 93.835 2 -2.043091571004019 0.4482433209315443 1.0 ['ENSG00000107560|ENST00000355624|RAB11FIP2', 'nc|ENSG00000107560|Q7L804-2|RAB11FIP2', 'ENST00000483413.1_1_10:119798481-119799811:-|nuORF'] 124896 24948 VLLPHGPI True NCI_RA007_Epitope_Rep1 844.5170738048 844.51596993586 103.24 2 -2.043144579986512 0.4482433209315443 1.0 ['ENST00000334690.10_1_4:184605887-184605989:+|nuORF'] 2003 24791 AEKRQALLGVI True NCI_RA007_Epitope_Rep5 1196.7241064489197 1196.72300993586 102.85 2 -2.043153230248258 0.4482433209315443 1.0 ['ENST00000459892.5_1_2:26531956-26538428:-|nuORF', 'nc|ENSG00000173567|Q8IZF5-2|ADGRF3', 'nc|ENSG00000173567|Q8IZF5-3|ADGRF3', 'ENSG00000173567|ENST00000651242|ADGRF3', 'nc|ENSG00000173567|Q8IZF5|ADGRF3'] 66604 8433 LSSPATTHTH True PC9_epitope_Rep1 1050.50942222506 1050.50832993586 37.274 2 -2.043310252592897 0.44824444372132377 1.0 ['ENST00000288699.10_1_2:27170870-27171059:+|nuORF'] 44553 13246 IPCRGHGG True H1975_Epitope_Rep3 795.3809913381499 795.3804449679301 56.206 1 -2.0433716134141005 0.44824444372132377 1.0 ['ENSG00000137270|ENST00000259803|GCM1'] 15558 12329 EASTVSKK True NCI_RA007_Epitope_Rep5 848.46034677432 848.45924993586 54.074 2 -2.0433991880767697 0.4482455664623895 1.0 ['ENSG00000168116|ENST00000370733|KIAA1586', 'nc|ENSG00000168116|Q9HCI6-2|KIAA1586', 'KIAA1586|p.D319N|1|0.35|ENSG00000168116|chr6:57053454-57053454|G/A|missense_variant'] 131530 21027 VVVGSVVI True NCI_RA007_Epitope_Rep4 770.49019035062 770.48908993586 91.143 2 -2.043485504276213 0.4482455664623895 1.0 ['ENSG00000180998|ENST00000321662|GPR137C', 'GPR137C|p.L255P|1|0.23|ENSG00000180998|chr14:52632206-52632206|T/C|missense_variant'] 83696 6224 QEAPPGQRL True PC9_epitope_Rep3 994.5195929859399 994.51848993586 28.979 2 -2.043854180177947 0.4482526735937873 1.0 ['ENST00000497886.5_1_16:2128976-2136835:+|nuORF'] 27553 22983 FPLAWTVLLLP True PC9_epitope_Rep4 1268.75328131888 1268.75218993586 96.624 2 -2.043982112826581 0.4482526735937873 1.0 ['nc|ENSG00000169242|P20827-2|EFNA1', 'ENST00000474413.5_1_1:155102304-155106540:+|nuORF', 'ENST00000497282.1_1_1:155103761-155106540:+|nuORF', 'ENSG00000169242|ENST00000368407|EFNA1', 'ENST00000469878.5_1_1:155106165-155106540:+|nuORF'] 19130 5929 ELINEELETFN True NCI_RA007_Epitope_Rep1 1349.63507623065 1349.63396993586 27.11 2 -2.0442049652775602 0.4482526735937873 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'nc|ENSG00000198947|P11532-4|DMD', 'nc|ENSG00000198947|P11532-11|DMD'] 93780 9602 RTTIEFLN True NCI_RA007_Epitope_Rep5 992.5290950404799 992.52798993586 43.575 2 -2.0442636172955857 0.4482586579030141 1.0 ['ENST00000262455.6_1_9:102782940-102782994:-|nuORF'] 104023 8136 SRSNDTLYIP True PC9_epitope_Rep3 1164.57750178488 1164.57640993586 36.274 2 -2.0444542385620474 0.4482754880694143 1.0 ['ENSG00000143387|ENST00000271651|CTSK'] 69180 23048 LVLVNYPFI True PC9_epitope_Rep6 1076.6270181766001 1076.62592993586 101.75 2 -2.0447976509905135 0.44831400960944023 1.0 ['ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000105722|P50548-2|ERF'] 137434 7864 YLMKYHSM True PC9_epitope_Rep2 1071.48815882863 1071.48706993586 35.616 2 -2.0448779239517734 0.4483199930587189 1.0 ['ENSG00000189037|ENST00000339042|DUSP21'] 14464 25078 DTRRWKKKQ True PC9_epitope_Rep1 1244.7101877202797 1244.7090899358602 101.36 2 -2.045369345166457 0.448325976378209 1.0 ['nc|ENSG00000169446|Q8N4V1-2|MMGT1'] 43836 14690 ILAGCHPN True NCI_RA007_Epitope_Rep2 823.4010580763901 823.40050496793 61.811 1 -2.0457393968973814 0.4483270972290006 1.0 ['ENST00000442770.5_1_7:94989287-95024046:-|nuORF', 'ENSG00000105852|ENST00000265627|PON3'] 6703 13915 AQAVERAKQV True PC9_epitope_Rep5 1098.61455599994 1098.6134499358602 58.544 2 -2.0457551576316155 0.4483270972290006 1.0 ['nc|ENSG00000140332|Q04726-2|TLE3', 'nc|ENSG00000140332|Q04726-7|TLE3', 'nc|ENSG00000140332|Q04726-3|TLE3', 'nc|ENSG00000140332|Q04726-6|TLE3', 'ENSG00000140332|ENST00000451782|TLE3', 'nc|ENSG00000140332|Q04726|TLE3', 'nc|ENSG00000140332|Q04726-4|TLE3', 'ENSG00000196781|ENST00000376499|TLE1', 'TLE1|p.R473Gfs*18|1|0.31|ENSG00000196781|chr9:81593189-81593189|G/-|frameshift_variant'] 31132 3336 GCQHLLAH True PC9_epitope_Rep4 877.42285615013 877.42174993586 18.834 2 -2.04611670109415 0.448365616120426 1.0 ['ENST00000266643.5_1_12:58150815-58152358:+|nuORF'] 92700 7509 RRHRAVGA True PC9_epitope_Rep4 921.5369148159298 921.53580993586 36.25 2 -2.0463061674581304 0.44837758112094395 1.0 ['ENST00000495604.5_1_2:152646270-152646327:-|nuORF'] 107839 4993 TARKKKKKK True PC9_epitope_Rep1 1114.7662460444199 1114.76514993586 24.066 2 -2.0463187076173943 0.44837758112094395 1.0 ['ENST00000567998.5_1_16:28621482-28621938:-|nuORF'] 71670 23435 MLTPLGKFS True PC9_epitope_Rep2 992.53648892004 992.5353899358599 95.614 2 -2.0464329019606633 0.44838356342656355 1.0 ['nc|ENSG00000162493|Q86YL7-4|PDPN', 'nc|ENSG00000162493|Q86YL7-3|PDPN'] 70066 11772 LYHNNIPLFI True H1975_Epitope_Rep1 1242.67609362734 1242.6749899358601 50.273 2 -2.046536297657421 0.4484003904131873 1.0 ['ENST00000469698.5_1_17:39981777-39991902:-|nuORF', 'nc|ENSG00000141698|Q969T7-2|NT5C3B', 'ENSG00000141698|ENST00000435506|NT5C3B'] 128584 24905 VSKKLAPI True H1975_Epitope_Rep2 854.5589386167799 854.5583949679301 102.37 1 -2.046707834298112 0.4484063723416946 1.0 ['nc|ENSG00000006740|Q17R89-2|ARHGAP44', 'nc|ENSG00000006740|Q17R89-3|ARHGAP44', 'ENSG00000006740|ENST00000379672|ARHGAP44'] 48242 6481 KDEVRYEVNCS True H1975_Epitope_Rep3 1340.6030649097197 1340.60196993586 29.897 2 -2.047195957423092 0.4484074913515448 1.0 ['ENSG00000176928|ENST00000652361|GCNT4'] 134024 5123 WPWRNTSEM True PC9_epitope_Rep3 1205.52877777065 1205.52768993586 24.793 2 -2.0472558549785913 0.4484074913515448 1.0 ['ENST00000316637.6_1_6:35277486-35278290:+|nuORF'] 110763 18712 TKKTTTDLKK True NCI_RA007_Epitope_Rep3 1162.6921376142998 1162.69104993586 81.836 2 -2.047387165654767 0.44841347300843687 1.0 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 17118 4789 EGSPPVHFSLP True NCI_RA007_Epitope_Rep2 1165.57677350889 1165.57513490379 23.258 3 -2.047615223633642 0.44841459182788235 1.0 ['nc|ENSG00000133816|O94851-3|MICAL2', 'ENSG00000133816|ENST00000683283|MICAL2', 'nc|ENSG00000133816|O94851-5|MICAL2', 'ENST00000525444.1_1_11:12281266-12284064:+|nuORF'] 8467 18310 ATSWPDLI True PC9_epitope_Rep4 901.4545331178899 901.45342993586 78.497 2 -2.047675272179945 0.44841459182788235 1.0 ['ENSG00000166349|ENST00000299440|RAG1', 'nc|ENSG00000166349|P15918-2|RAG1'] 92335 17213 RQNQSNLK True NCI_RA007_Epitope_Rep5 986.52574099554 986.52464993586 72.982 2 -2.0479426790086466 0.4484216918422451 1.0 ['nc|ENSG00000101977|P10911|MCF2', 'nc|ENSG00000101977|P10911-4|MCF2', 'nc|ENSG00000101977|P10911-3|MCF2', 'ENSG00000101977|ENST00000519895|MCF2', 'nc|ENSG00000101977|P10911-6|MCF2', 'nc|ENSG00000101977|P10911-2|MCF2'] 39020 23078 HKIIPGFMCQ True PC9_epitope_Rep2 1172.5834561958 1172.58234993586 94.262 2 -2.047971556022889 0.4484216918422451 1.0 ['PPIAL4A|p.R55K|1|0.15|ENSG00000263353|chr1:120889984-120889984|G/A|missense_variant', 'ENST00000441944.2_1_9:7597894-7598236:+|nuORF'] 28018 28180 FQYPEHPIIF True H1975_Epitope_Rep1 1289.6444591458896 1289.64280490379 119.06 3 -2.0481447107837063 0.4484216918422451 1.0 ['FZD9|p.R265H|1|0.33|ENSG00000188763|chr7:73434801-73434801|G/A|missense_variant'] 39545 18493 HPGAPETH True H1975_Epitope_Rep2 844.3827651599602 844.38166993586 76.736 2 -2.048276057254558 0.44842879139467806 1.0 ['ENST00000520753.5_1_19:48752875-48753037:-|nuORF', 'ENST00000518596.5_1_19:48744293-48753037:-|nuORF'] 62021 22788 LLLTGHDL True H1975_Epitope_Rep2 880.50181766348 880.50072993586 94.094 2 -2.0484063849042284 0.44842879139467806 1.0 ['ENST00000397387.2_1_13:101408869-101409262:-|nuORF'] 110807 18672 TKRKDEKP True H1975_Epitope_Rep2 1000.5665431783598 1000.56544993586 77.502 2 -2.0484149507335525 0.44842879139467806 1.0 ['nc|ENSG00000085276|Q03112|MECOM', 'ENSG00000085276|ENST00000651503|MECOM', 'nc|ENSG00000085276|Q03112-8|MECOM', 'nc|ENSG00000085276|Q03112-5|MECOM', 'nc|ENSG00000085276|Q03112-6|MECOM', 'nc|ENSG00000085276|Q03112-1|MECOM', 'nc|ENSG00000085276|Q03112-4|MECOM'] 93558 25579 RSRLNIYK True PC9_epitope_Rep2 1048.6141620771198 1048.61357496793 104.08 1 -2.048579282275485 0.4484377371582211 1.0 ['TRPC5|p.Q824Kfs*81|1|0.49|ENSG00000072315|chrX:111776765-111776765|G/-|frameshift_variant', 'ENSG00000072315|ENST00000262839|TRPC5', 'TRPC4|p.H192Y|1|0.19|ENSG00000133107|chr13:37746260-37746260|G/A|missense_variant', 'nc|ENSG00000133107|Q9UBN4-7|TRPC4', 'nc|ENSG00000133107|Q9UBN4-4|TRPC4', 'nc|ENSG00000133107|Q9UBN4-5|TRPC4', 'TRPC4|p.Y706Ifs*18|1|0.09|ENSG00000133107|chr13:37639263-37639264|-/T|frameshift_variant', 'nc|ENSG00000133107|Q9UBN4-3|TRPC4', 'nc|ENSG00000133107|Q9UBN4-2|TRPC4', 'ENSG00000133107|ENST00000379705|TRPC4'] 116071 16931 TVSDILKEHPS True NCI_RA007_Epitope_Rep1 1224.635016661 1224.6339099358602 69.985 2 -2.048690136429029 0.4484377371582211 1.0 ['ANKS1B|p.L263S|1|0.23|ENSG00000185046|chr12:99779930-99779930|A/G|missense_variant'] 80317 21926 PLFFLKVP True PC9_epitope_Rep4 959.5844250886298 959.58332993586 92.547 2 -2.0487847802365127 0.4484377371582211 1.0 ['nc|ENSG00000083223|Q5VYS8-2|TUT7'] 65981 19693 LSLSLDWRRRR True NCI_RA007_Epitope_Rep2 1456.8375134917198 1456.83640993586 81.552 2 -2.0487961555768988 0.4484377371582211 1.0 ['ENST00000586602.5_1_19:9679707-9694912:-|nuORF', 'ENST00000320451.6_1_19:9679704-9695196:-|nuORF'] 9720 20268 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 88.301 2 -2.048858748735314 0.4484377371582211 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 109278 19339 TGDLSPGH True H1975_Epitope_Rep1 782.3558817057801 782.35533496793 80.563 1 -2.0488905059024813 0.4484377371582211 1.0 ['nc|ENSG00000171813|Q6NUJ5-2|PWWP2B', 'ENSG00000171813|ENST00000305233|PWWP2B'] 16444 11287 EELNRRYH True H1975_Epitope_Rep1 1115.54720471611 1115.5461099358602 48.393 2 -2.048963101337846 0.4484377371582211 1.0 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 44004 24840 ILHYDETY True H1975_Epitope_Rep1 1052.4814761417201 1052.4803699358602 102.87 2 -2.049115945344043 0.4484377371582211 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 72962 20021 NCLMRLILK True NCI_RA007_Epitope_Rep4 1102.63549176866 1102.63438993586 86.583 2 -2.0491743211595788 0.4484377371582211 1.0 ['SERPINA10|p.K219Nfs*12|1|0.3|ENSG00000140093|chr14:94289943-94289943|A/-|frameshift_variant'] 90280 24988 RHRRYKHT True PC9_epitope_Rep2 1152.6376914863597 1152.63604490379 101.78 3 -2.049292831657411 0.4484377371582211 1.0 ['ENSG00000102974|ENST00000264010|CTCF', 'nc|ENSG00000102974|P49711-2|CTCF', 'nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-11|CTCFL', 'nc|ENSG00000124092|Q8NI51-6|CTCFL', 'nc|ENSG00000124092|Q8NI51-9|CTCFL', 'nc|ENSG00000124092|Q8NI51-4|CTCFL', 'nc|ENSG00000124092|Q8NI51-8|CTCFL'] 37975 23995 HEGDHSVP True H1975_Epitope_Rep2 876.37259439908 876.37148993586 98.817 2 -2.0494010494058656 0.4484377371582211 1.0 ['ENST00000526769.3_1_11:6735844-6741409:-|nuORF', 'nc|ENSG00000254838|Q7Z2Y8|GVINP1'] 59776 22538 LHAAAAAA True NCI_RA007_Epitope_Rep5 694.37622322754 694.3756749679301 93.874 1 -2.049443309541472 0.4484377371582211 1.0 ['ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENSG00000125816|ENST00000351817|NKX2-4'] 118072 16368 VATVADTDDH True PC9_epitope_Rep4 1042.45671794586 1042.45562993586 70.922 2 -2.049451973739772 0.4484377371582211 1.0 ['nc|ENSG00000198945|Q96JM7-2|L3MBTL3', 'ENSG00000198945|ENST00000361794|L3MBTL3'] 9716 16125 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 71.129 2 -2.0496294334382448 0.4484377371582211 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 24815 23025 FCLSVHPV True NCI_RA007_Epitope_Rep5 900.45275929608 900.45166993586 95.804 2 -2.0497007548928328 0.4484377371582211 1.0 ['nc|ENSG00000158517|P14598-2|NCF1', 'ENST00000449343.6_1_7:74188378-74197664:+|nuORF', 'ENST00000455062.2_1_7:74191691-74197664:+|nuORF', 'ENST00000398421.6_1_7:74191697-74197664:+|nuORF'] 16985 14626 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 62.927 2 -2.0498327898275535 0.4484377371582211 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 91378 21775 RMSLLHKH True NCI_RA007_Epitope_Rep5 1020.56510370972 1020.56400993586 90.879 2 -2.0499178782614345 0.44844969644405897 1.0 ['ENSG00000124216|ENST00000244050|SNAI1', 'ENSG00000019549|ENST00000020945|SNAI2'] 22512 21067 ETKRKEKL True PC9_epitope_Rep6 1030.6134933707797 1030.6123899358602 93.858 2 -2.0500501647785714 0.44844969644405897 1.0 ['ENST00000398505.7_1_21:43413696-43413789:-|nuORF'] 59775 22629 LHAAAAAA True H1975_Epitope_Rep2 694.37622322754 694.3756749679301 93.483 1 -2.050299052106208 0.4484665170585748 1.0 ['ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENSG00000125816|ENST00000351817|NKX2-4'] 118538 6306 VDVGSELYLF True NCI_RA007_Epitope_Rep2 1140.57029114612 1140.56918993586 29.134 2 -2.050730271988729 0.44847249625983826 1.0 ['ENST00000265138.3_1_5:90667021-90667204:-|nuORF'] 80160 23176 PKTKLLCKHL True PC9_epitope_Rep2 1179.71618461751 1179.71508993586 94.631 2 -2.050809038641538 0.44847847533146146 1.0 ['ENST00000519187.5_2_8:133771681-133772790:-|nuORF', 'ENST00000519016.5_2_8:133771146-133772850:-|nuORF', 'ENST00000519304.1_2_8:133771146-133772790:-|nuORF'] 57482 7588 LEKIEGNPY True H1975_Epitope_Rep3 1061.53932537101 1061.53822993586 34.168 2 -2.050897868115719 0.4484818263612614 1.0 ['ENST00000599258.1_1_19:52485239-52490037:-|nuORF'] 33124 16869 GKPGKRKE True NCI_RA007_Epitope_Rep4 898.5348491272599 898.53374993586 73.098 2 -2.050978804790674 0.4484818263612614 1.0 ['chr12:27969516-27970070|401|16.22|0.2|6.37|-|ENST00000542963|PTHLH,PTHLH', 'nc|ENSG00000087494|P12272-2|PTHLH', 'ENSG00000087494|ENST00000545234|PTHLH', 'nc|ENSG00000087494|P12272-3|PTHLH'] 52049 23696 KLHSQLRTTVL True PC9_epitope_Rep2 1294.7721192705 1294.77046490379 96.619 3 -2.0512342629084177 0.4484818263612614 1.0 ['ENSG00000132613|ENST00000338779|MTSS2', 'nc|ENSG00000132613|Q765P7-2|MTSS2'] 129570 18515 VTGKEYSV True PC9_epitope_Rep1 881.44944773745 881.4488949679301 76.007 1 -2.051365228676427 0.4484818263612614 1.0 ['ENST00000552656.5_1_12:56610319-56615704:-|nuORF', 'ENST00000345093.8_1_12:56610319-56615573:-|nuORF'] 102982 19117 SQISAKEQIIL True NCI_RA007_Epitope_Rep5 1228.7027022979998 1228.70160993586 80.404 2 -2.051449127571472 0.4484818263612614 1.0 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 34045 26973 GNPTKHKTVFP True H1975_Epitope_Rep2 1224.6615061923599 1224.6604099358601 111.3 2 -2.0515372960995006 0.4484818263612614 1.0 ['ENST00000518781.1_1_8:67351545-67351743:+|nuORF'] 42805 24585 IFIPKQKPVQ True NCI_RA007_Epitope_Rep5 1196.7281292001999 1196.7270299358602 102.04 2 -2.0517740883549576 0.44849864498644987 1.0 ['ENSG00000138594|ENST00000308580|TMOD3'] 131225 26694 VVPQLKYKV True PC9_epitope_Rep5 1072.6644663144798 1072.6633699358601 108.87 2 -2.0520364424399 0.44852630323790527 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 85467 5313 QLHAWWYF True PC9_epitope_Rep4 1149.5396001545298 1149.53850993586 27.149 2 -2.0528578246632754 0.44853228114295624 1.0 ['ENSG00000204007|ENST00000371763|GLT6D1'] 130850 15714 VVGDTSGK True NCI_RA007_Epitope_Rep1 761.39193286133 761.3913849679301 65.218 1 -2.053180833707732 0.44853339692587857 1.0 ['ENSG00000111203|ENST00000228799|ITFG2', 'ENST00000543029.1_1_12:2921860-2926550:+|nuORF', 'nc|ENSG00000111203|Q969R8-2|ITFG2'] 127964 22446 VRPQMETT True NCI_RA007_Epitope_Rep5 960.4698659122 960.46876993586 93.509 2 -2.0532089021165927 0.44853339692587857 1.0 ['ENST00000423112.2_1_9:3568814-3671485:+|nuORF'] 78683 18067 PEDCGQPGS True NCI_RA007_Epitope_Rep5 888.3283466286 888.32724993586 76.293 2 -2.053331772357413 0.448571893122324 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 80162 23170 PKTKLLCKHL True PC9_epitope_Rep5 1179.71618461751 1179.71508993586 94.108 2 -2.0534772342770355 0.44857787027402013 1.0 ['ENST00000519187.5_2_8:133771681-133772790:-|nuORF', 'ENST00000519016.5_2_8:133771146-133772850:-|nuORF', 'ENST00000519304.1_2_8:133771146-133772790:-|nuORF'] 73660 19660 NGLKSLSA True PC9_epitope_Rep6 788.43921740692 788.43812993586 88.28 2 -2.0537501597404404 0.44858982418868826 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 113530 7053 TQTLQFEVQAR True H1975_Epitope_Rep3 1319.6833638357498 1319.6822699358602 32.094 2 -2.053791538562235 0.44858982418868826 1.0 ['PCDHGC4|p.P745Lfs*10|1|0.37|ENSG00000242419|chr5:141487403-141487403|C/-|frameshift_variant', 'nc|ENSG00000242419|Q9Y5F7-2|PCDHGC4', 'ENSG00000242419|ENST00000306593|PCDHGC4'] 60975 25411 LLAFAKNL True PC9_epitope_Rep3 888.54328855264 888.54218993586 103.18 2 -2.0538679008740757 0.4485958009516687 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 30344 15487 GAEAKAKA True NCI_RA007_Epitope_Rep2 744.4130026590799 744.4124549679301 64.945 1 -2.054058762087199 0.44861261651853457 1.0 ['ENSG00000102316|ENST00000375068|MAGED2', 'nc|ENSG00000102316|Q9UNF1-2|MAGED2'] 32050 5993 GEVNDARTI True PC9_epitope_Rep2 973.4828731240499 973.48176993586 28.44 2 -2.054147599957521 0.44862456916173504 1.0 ['PCOLCE2|p.R226T|1|0.38|ENSG00000163710|chr3:142838803-142838803|C/G|missense_variant'] 131022 19355 VVLHLGLPPS True NCI_RA007_Epitope_Rep2 1030.61751612206 1030.61640993586 80.189 2 -2.0541588837767657 0.44862456916173504 1.0 ['RECQL4|p.A785V|1|0.2|ENSG00000160957|chr8:144513327-144513327|G/A|missense_variant'] 101329 13243 SLYPSRPSV True PC9_epitope_Rep1 1004.5290950404799 1004.52798993586 55.805 2 -2.0542712676651673 0.44863054528901075 1.0 ['DLG5|p.P1167S|1|0.05|ENSG00000151208|chr10:77819922-77819922|G/A|missense_variant'] 15635 9513 EAWLLLPFFKV True H1975_Epitope_Rep3 1361.77474503945 1361.77364993586 41.597 2 -2.0548293257032024 0.4486581982138212 1.0 ['ENST00000461417.5_1_2:220110721-220111658:+|nuORF'] 86030 4322 QPLFTESQK True NCI_RA007_Epitope_Rep5 1076.55022440788 1076.54912993586 23.227 2 -2.0550899126827558 0.4486761247249829 1.0 ['nc|ENSG00000089737|Q9GZR7-2|DDX24', 'ENSG00000089737|ENST00000621632|DDX24', 'ENST00000555762.1_1_14:94517539-94521656:-|nuORF'] 38999 22828 HKEEWIRW True PC9_epitope_Rep6 1182.5934266325398 1182.59179490379 100.9 3 -2.0551177146746813 0.4486761247249829 1.0 ['ENST00000582793.1_1_17:71229378-71239119:+|nuORF', 'ENST00000359042.6_1_17:71233009-71239119:+|nuORF'] 117536 26832 VAFTPVKK True PC9_epitope_Rep5 888.5432885526399 888.54274496793 109.57 1 -2.0551942590664978 0.4486761247249829 1.0 ['ZNF135|p.T154K|1|0.54|ENSG00000176293|chr19:58066945-58066945|C/A|missense_variant'] 127154 9174 VQEILRDL True PC9_epitope_Rep4 984.5603951687599 984.55928993586 42.883 2 -2.055323743141238 0.44868209996965364 1.0 ['nc|ENSG00000108852|Q14168-6|MPP2', 'nc|ENSG00000108852|Q14168-2|MPP2', 'nc|ENSG00000108852|Q14168-3|MPP2', 'nc|ENSG00000108852|Q14168|MPP2', 'nc|ENSG00000108852|Q14168-4|MPP2', 'ENST00000520319.1_1_17:41960558-41984643:-|nuORF', 'ENSG00000108852|ENST00000269095|MPP2'] 78160 24058 PAPPIHMV True PC9_epitope_Rep2 860.45784467652 860.45674993586 98.042 2 -2.05537271456295 0.4486880750848064 1.0 ['ENST00000263857.10_1_2:86252617-86252839:-|nuORF'] 31145 19367 GDCGKRFS True NCI_RA007_Epitope_Rep5 868.38613628824 868.38502993586 81.379 2 -2.055921750602571 0.44869627414006114 1.0 ['ENSG00000236609|ENST00000457543|ZNF853', 'nc|ENSG00000159917|Q14590-2|ZNF235', 'ENSG00000159917|ENST00000291182|ZNF235'] 137624 14844 YLVNRIKEL True PC9_epitope_Rep5 1146.67609362734 1146.6749899358601 62.099 2 -2.0559376178769915 0.44869627414006114 1.0 ['ENSG00000206530|ENST00000393845|CFAP44'] 92585 24634 RRCRAACPSR True PC9_epitope_Rep2 1174.5923981700598 1174.5913099358602 100.4 2 -2.055970061184507 0.44869627414006114 1.0 ['ENST00000598494.5_2_19:6466686-6467070:+|nuORF'] 25902 25236 FGKVKVGK True H1975_Epitope_Rep2 861.5436229058098 861.54252993586 103.67 2 -2.0560666068460063 0.44869627414006114 1.0 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000511248.1_1_5:40777545-40798228:-|nuORF', 'ENST00000397006.2_1_5:40777312-40798264:-|nuORF'] 35288 7042 GSQQLEAGWP True H1975_Epitope_Rep3 1071.49852318819 1071.49742993586 32.052 2 -2.056075676716522 0.44869627414006114 1.0 ['ENST00000480426.5_1_13:114523839-114535869:-|nuORF'] 115439 17361 TVFHNSRAV True PC9_epitope_Rep4 1029.5355774032498 1029.5344899358602 74.783 2 -2.0562068213677387 0.44869849801686207 1.0 ['nc|ENSG00000146530|Q8N2E2-3|VWDE', 'ENSG00000146530|ENST00000275358|VWDE'] 85733 12461 QLTPEIKSK True PC9_epitope_Rep1 1042.60225998074 1042.60116993586 52.797 2 -2.0562729881304436 0.44869849801686207 1.0 ['ENSG00000175899|ENST00000318602|A2M'] 35088 17115 GRLNQPLSV True NCI_RA007_Epitope_Rep5 982.5559784946599 982.55488993586 72.606 2 -2.056273229697209 0.44869849801686207 1.0 ['ENST00000604081.1_1_12:54388882-54389314:-|nuORF'] 10610 18536 CSELSRHRV True PC9_epitope_Rep4 1085.54001116069 1085.5389099358601 79.373 2 -2.0563094399475825 0.44869849801686207 1.0 ['ENSG00000182261|ENST00000691676|NLRP10'] 4049 16376 AHPFLAGH True NCI_RA007_Epitope_Rep1 848.4293214295599 848.42822993586 67.812 2 -2.056514140044846 0.44871044646727354 1.0 ['ENST00000397061.3_1_19:33183408-33183504:+|nuORF'] 79314 10294 PGKKSIAA True NCI_RA007_Epitope_Rep4 770.4650382319398 770.46394993586 46.451 2 -2.056574660810981 0.44871044646727354 1.0 ['ENSG00000162377|ENST00000371538|COA7'] 61882 9361 LLLGREGC True H1975_Epitope_Rep3 859.4585729525099 859.45746993586 41.007 2 -2.056605506946173 0.4487126695851935 1.0 ['ENST00000310924.6_1_17:77912907-77913039:-|nuORF'] 13643 23216 DPVNRAKK True PC9_epitope_Rep3 926.5297637468199 926.52866993586 94.574 2 -2.0567879189061804 0.4487126695851935 1.0 ['ENSG00000129317|ENST00000344862|PUS7L', 'nc|ENSG00000129317|Q9H0K6-2|PUS7L'] 95731 4246 SCCCCCCC True PC9_epitope_Rep5 826.10688658094 826.10578993586 21.403 2 -2.056811972233648 0.4487126695851935 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 5817 22188 APFPHSGL True H1975_Epitope_Rep3 824.41808803952 824.41698993586 92.788 2 -2.05686196621543 0.4487126695851935 1.0 ['ENSG00000205022|ENST00000419291|PABPN1L', 'nc|ENSG00000205022|A6NDY0-4|PABPN1L'] 120531 19227 VGAAAVGQR True PC9_epitope_Rep5 827.4613498338299 827.46024993586 78.996 2 -2.056974368222996 0.4487246169516503 1.0 ['ENSG00000182968|ENST00000330949|SOX1'] 121416 9180 VGIAKHIQ True PC9_epitope_Rep4 864.5181364339601 864.51702993586 42.905 2 -2.0571542856357206 0.4487246169516503 1.0 ['ENSG00000092929|ENST00000207549|UNC13D', 'nc|ENSG00000092929|Q70J99-3|UNC13D', 'ENST00000591563.5_1_17:73828844-73835996:-|nuORF'] 53380 15920 KVAAARGR True NCI_RA007_Epitope_Rep5 827.5089687325899 827.50786993586 67.963 2 -2.057229412623853 0.4487414262030405 1.0 ['ENST00000565877.5_1_16:89284207-89284655:+|nuORF'] 134431 26820 WTHGAQGG True H1975_Epitope_Rep1 812.3565504121198 812.35544993586 111.75 2 -2.057664936747909 0.44878212629480346 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 38440 23043 HGVHVLCP True PC9_epitope_Rep4 860.43269255784 860.43158993586 96.857 2 -2.057804391083574 0.44878212629480346 1.0 ['ENST00000402886.7_1_6:35444208-35454475:-|nuORF'] 113192 24922 TQDNPPVF True PC9_epitope_Rep2 916.4290466460399 916.4279499358599 101.53 2 -2.057913952713688 0.44878212629480346 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4'] 106613 24874 SWKKRLSVQ True NCI_RA007_Epitope_Rep1 1130.6560268890998 1130.65492993586 102.96 2 -2.05795993361953 0.44878212629480346 1.0 ['ENST00000593203.1_1_19:10943515-10944133:+|nuORF'] 24627 5072 FAQWWKPYDF True NCI_RA007_Epitope_Rep4 1386.6397081186199 1386.6386099358601 26.011 2 -2.05842681888675 0.44878212629480346 1.0 ['ENSG00000152404|ENST00000282251|CWF19L2'] 37153 6175 GVTHSLTA True PC9_epitope_Rep5 784.4079172786401 784.40682993586 28.736 2 -2.0587750241321245 0.44878809877238796 1.0 ['L1PA3_dup2320|chr3:189017230-189025537:-|1.733208157752415|0.1456232774921604|3.57|495.0|293|1|anti-sense'] 137487 17675 YLPPFFLL True NCI_RA007_Epitope_Rep5 1008.56844067132 1008.56787496793 74.769 1 -2.059173451937411 0.448806015428621 1.0 ['ENST00000399075.6_1_4:120219277-120219328:-|nuORF'] 83552 20239 QDQEQRIL True PC9_epitope_Rep5 1028.5250722892 1028.52447496793 82.898 1 -2.0591771257694416 0.448806015428621 1.0 ['ENSG00000160710|ENST00000368474|ADAR', 'nc|ENSG00000160710|P55265-4|ADAR', 'nc|ENSG00000160710|P55265-3|ADAR', 'nc|ENSG00000160710|P55265-2|ADAR', 'ENST00000463920.5_1_1:154573515-154574721:-|nuORF'] 113193 24190 TQDNPPVF True PC9_epitope_Rep4 916.4290466460399 916.4279499358599 101.52 2 -2.0592527238885427 0.448806015428621 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4'] 49564 24783 KKKDHLISGLL True PC9_epitope_Rep3 1250.7710566413398 1250.76994993586 100.71 2 -2.059995586285609 0.4488938005157208 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 39235 24169 HLKLGARFR True PC9_epitope_Rep4 1096.6617809758798 1096.66068993586 101.44 2 -2.05999874765151 0.4488938005157208 1.0 ['ENST00000389262.8_1_22:19048277-19109719:-|nuORF'] 10293 21665 CGYPLVSC True H1975_Epitope_Rep2 840.35099664948 840.34988993586 89.623 2 -2.0605177899926574 0.448910605748708 1.0 ['nc|ENSG00000135119|Q96EX2-2|RNFT2'] 90162 5570 RHDLKELR True PC9_epitope_Rep4 1065.60432566941 1065.60322993586 28.194 2 -2.0609728908527805 0.4489453213871705 1.0 ['ENSG00000102595|ENST00000376747|UGGT2'] 105601 13862 SVEHLEEK True PC9_epitope_Rep5 969.4767251144499 969.47562993586 58.341 2 -2.0610430441196392 0.4489453213871705 1.0 ['ENST00000456229.1_1_7:91506204-91509986:-|nuORF'] 131399 8862 VVTATVKS True NCI_RA007_Epitope_Rep4 803.47526856247 803.47416993586 40.909 2 -2.0611091647393764 0.4489453213871705 1.0 ['ENSG00000106333|ENST00000223061|PCOLCE', 'ENST00000472348.1_1_7:100204024-100205723:+|nuORF'] 33141 23349 GKPRLKIYL True PC9_epitope_Rep6 1086.6913497686598 1086.69024993586 102.92 2 -2.0611393997466254 0.4489453213871705 1.0 ['ENST00000419462.1_1_8:102381113-102381542:+|nuORF'] 19162 23678 ELKDKKLFLKR True PC9_epitope_Rep5 1416.88166971948 1416.8805699358602 96.056 2 -2.0612779219331014 0.44895306389939016 1.0 ['nc|ENSG00000115085|P43403-3|ZAP70', 'ENSG00000115085|ENST00000264972|ZAP70', 'ENST00000487283.5_1_2:98350954-98351329:+|nuORF', 'nc|ENSG00000115085|P43403-2|ZAP70'] 117639 19939 VAIELRNEAEL True H1975_Epitope_Rep3 1255.67721582615 1255.67610993586 83.452 2 -2.0614719282313883 0.44895306389939016 1.0 ['VPS16|p.H804L|1|0.35|ENSG00000215305|chr20:2866465-2866465|A/T|missense_variant'] 90555 20385 RKFVGGSG True NCI_RA007_Epitope_Rep5 806.4398861132598 806.43878993586 85.346 2 -2.061572895686226 0.44895306389939016 1.0 ['ENSG00000069535|ENST00000378069|MAOB', 'nc|ENSG00000069535|P27338-2|MAOB', 'nc|ENSG00000189221|P21397-2|MAOA', 'ENSG00000189221|ENST00000338702|MAOA'] 134985 21818 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 91.05 2 -2.061847303556743 0.44895306389939016 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 131219 26012 VVPQLKYKV True NCI_RA007_Epitope_Rep2 1072.6644663144798 1072.6633699358601 110.36 2 -2.061849717815465 0.44895306389939016 1.0 ['ENSG00000115423|ENST00000389394|DNAH6', 'nc|ENSG00000115423|Q9C0G6-4|DNAH6'] 121540 11081 VGKNEKTK True PC9_epitope_Rep1 902.5185303567799 902.51798496793 47.511 1 -2.0619061694337715 0.44895306389939016 1.0 ['ENSG00000159079|ENST00000290155|CFAP298', 'ENST00000483315.1_1_21:33975401-33976611:-|nuORF'] 112807 5238 TPLSAAAHTH True PC9_epitope_Rep4 1004.5039429218 1004.50284993586 26.848 2 -2.0619200052393993 0.44895306389939016 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 6904 22394 AQKKLKLVRT True NCI_RA007_Epitope_Rep3 1183.7764763749497 1183.77536993586 97.322 2 -2.0619241165082474 0.44895306389939016 1.0 ['ENST00000484795.5_1_12:6761826-6762560:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-8|ING4', 'ENST00000488381.5_1_12:6760363-6764813:-|nuORF', 'nc|ENSG00000111653|Q9UNL4-3|ING4', 'nc|ENSG00000111653|Q9UNL4-4|ING4', 'nc|ENSG00000111653|Q9UNL4-7|ING4', 'nc|ENSG00000111653|Q9UNL4-5|ING4', 'nc|ENSG00000111653|Q9UNL4-6|ING4', 'ENSG00000111653|ENST00000341550|ING4', 'nc|ENSG00000111653|Q9UNL4|ING4', 'ENST00000472002.5_1_12:6760363-6762075:-|nuORF'] 98893 22412 SIWHRWKKP True PC9_epitope_Rep4 1236.68799572372 1236.68688993586 94.439 2 -2.061954615532726 0.44895306389939016 1.0 ['IGDCC4|p.L768H|1|0.21|ENSG00000103742|chr15:65390260-65390260|A/T|missense_variant'] 140793 5831 YYSFIHLSF True PC9_epitope_Rep4 1175.56514619603 1175.56351490379 29.294 3 -2.0622207733266733 0.44895306389939016 1.0 ['NLRP12|p.E547Gfs*21|1|0.14|ENSG00000142405|chr19:53810019-53810019|T/-|frameshift_variant', 'nc|ENSG00000142405|P59046-4|NLRP12', 'nc|ENSG00000142405|P59046-3|NLRP12', 'nc|ENSG00000142405|P59046-6|NLRP12', 'nc|ENSG00000142405|P59046-2|NLRP12', 'ENSG00000142405|ENST00000324134|NLRP12', 'nc|ENSG00000142405|P59046-7|NLRP12', 'NLRP12|p.R508S|1|0.36|ENSG00000142405|chr19:53810135-53810135|C/A|missense_variant'] 95729 3851 SCCCCCCC True PC9_epitope_Rep5 826.10688658094 826.10578993586 19.895 2 -2.0622758651892434 0.44895306389939016 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 3287 12132 AGGGHPNK True H1975_Epitope_Rep1 736.36163579256 736.3610849679301 51.682 1 -2.0622903129920713 0.44895306389939016 1.0 ['ENST00000490362.1_1_2:217498183-217525611:+|nuORF'] 39036 24353 HKPAIRRHLKE True PC9_epitope_Rep1 1383.82113515159 1383.82002993586 98.503 2 -2.062376899898182 0.44895306389939016 1.0 ['ENSG00000204366|ENST00000375527|ZBTB12'] 3578 11281 AGPEGRLLPL True PC9_epitope_Rep1 1021.5920296502098 1021.59092993586 48.272 2 -2.0623785185933956 0.44895306389939016 1.0 ['ENSG00000126705|ENST00000673934|AHDC1'] 138555 23403 YRNMKEILTK True PC9_epitope_Rep2 1294.7067421326199 1294.70564993586 95.495 2 -2.0626104407686396 0.4489563814000845 1.0 ['ENSG00000163818|ENST00000296135|LZTFL1', 'ENST00000478551.1_1_3:45868846-45870002:-|nuORF', 'ENST00000469874.5_1_3:45867808-45883491:-|nuORF', 'nc|ENSG00000163818|Q9NQ48-2|LZTFL1'] 20500 5034 EPTSEKKL True H1975_Epitope_Rep3 930.5022115863 930.50110993586 24.484 2 -2.062611714893467 0.4489563814000845 1.0 ['ENST00000559010.1_1_15:85081807-85085521:-|nuORF', 'ENST00000354771.8_1_15:85081845-85089490:-|nuORF', 'ENST00000339094.5_1_15:85081807-85112930:-|nuORF'] 112633 24489 TPELKNTA True NCI_RA007_Epitope_Rep3 872.46034677432 872.45924993586 105.96 2 -2.0627209443915993 0.4489563814000845 1.0 ['ENST00000512287.1_1_5:80531725-80531761:-|nuORF'] 121572 15263 VGKSTEWDL True PC9_epitope_Rep6 1033.50802524273 1033.5069299358602 70.819 2 -2.0627348793545437 0.4489563814000845 1.0 ['RFPL2|p.T249K|1|0.28|ENSG00000128253|chr22:32191163-32191163|G/T|missense_variant'] 114963 24322 TTILHLRQ True H1975_Epitope_Rep2 980.5767139392401 980.57560993586 100.08 2 -2.062735551033293 0.4489563814000845 1.0 ['ENST00000495037.1_1_3:66430689-66454678:-|nuORF', 'ENST00000496559.6_1_3:66430689-66456253:-|nuORF', 'ENSG00000144749|ENST00000273261|LRIG1', 'nc|ENSG00000144749|Q96JA1-2|LRIG1'] 32159 22519 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 93.801 2 -2.062740906877725 0.4489563814000845 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 27216 22589 FLVAHRKD True PC9_epitope_Rep1 984.5504991913999 984.54940993586 91.696 2 -2.0630175079242137 0.4489694238955019 1.0 ['ENSG00000118363|ENST00000263672|SPCS2'] 133387 19904 WFPVTQSP True NCI_RA007_Epitope_Rep5 960.4705175351999 960.46942993586 83.475 2 -2.0631784823537984 0.4489694238955019 1.0 ['ENST00000304733.7_1_16:90071337-90071556:-|nuORF'] 125886 24288 VNSSWKSEPE True PC9_epitope_Rep1 1161.53021723929 1161.52858490379 98.248 3 -2.063370425369515 0.4489694238955019 1.0 ['ENSG00000160753|ENST00000368352|RUSC1', 'nc|ENSG00000160753|Q9BVN2-4|RUSC1'] 30336 11788 GADSHRSS True H1975_Epitope_Rep1 815.3521933076701 815.35164496793 50.334 1 -2.063407851275929 0.4489694238955019 1.0 ['ENST00000355897.9_1_3:169755804-169797620:+|nuORF'] 12368 25142 DIYNHRFHR True PC9_epitope_Rep5 1256.61628733544 1256.6151899358601 101.85 2 -2.063449609238833 0.448975392080409 1.0 ['nc|ENSG00000135655|Q9Y4E8-2|USP15', 'nc|ENSG00000135655|Q9Y4E8-3|USP15', 'ENSG00000135655|ENST00000280377|USP15', 'USP15|p.R710Tfs*14|1|0.16|ENSG00000135655|chr12:62391317-62391318|-/A|frameshift_variant'] 138541 17316 YRLTNAGYDYL True PC9_epitope_Rep6 1347.64591569787 1347.6448099358602 79.218 2 -2.0636344463576544 0.44899219096925125 1.0 ['ENSG00000058729|ENST00000283109|RIOK2', 'nc|ENSG00000058729|Q9BVS4-2|RIOK2', 'ENST00000508991.1_1_5:96512756-96518871:-|nuORF'] 137614 4582 YLVFMAEL True PC9_epitope_Rep6 984.4990407821599 984.49794993586 24.894 2 -2.0637808714042567 0.44899815877829524 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'CAMSAP2-CARS|1|fusion', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 135859 22253 YEQVLHHI True H1975_Epitope_Rep2 1037.52942939365 1037.52832993586 91.965 2 -2.0638653747387483 0.4490100940085777 1.0 ['ENSG00000158258|ENST00000458420|CLSTN2'] 135682 16773 YEHWLYYLD True PC9_epitope_Rep5 1300.57643915572 1300.57534993586 69.523 2 -2.063904046043735 0.4490100940085777 1.0 ['nc|ENSG00000163935|Q9UHJ3-2|SFMBT1', 'ENSG00000163935|ENST00000394752|SFMBT1'] 126010 15442 VPAGLPLN True PC9_epitope_Rep5 779.4541391950701 779.45304993586 64.407 2 -2.0640848014486366 0.44902313290590884 1.0 ['ENSG00000062096|ENST00000381127|ARSF'] 111760 16280 TLQKYKKP True PC9_epitope_Rep6 1004.6018660579198 1004.60076993586 74.981 2 -2.0641246390320758 0.44902313290590884 1.0 ['L1PA15_dup6276|chr11:102416216-102419177:+|1.0749105236661216|0.1675036115542428|2.68|464.0|2|1|sense'] 79223 5245 PGGGGAAS True NCI_RA007_Epitope_Rep5 572.25543938852 572.25489496793 26.873 1 -2.064264618259667 0.44902313290590884 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant'] 41784 14775 IDRGDYYLE True PC9_epitope_Rep6 1142.5244035828598 1142.52387496793 68.791 1 -2.064290501596431 0.44902313290590884 1.0 ['ENSG00000168300|ENST00000522514|PCMTD1', 'ENST00000521046.1_1_8:52773369-52773723:-|nuORF'] 110764 18955 TKKTTTDLKK True NCI_RA007_Epitope_Rep4 1162.6921376142998 1162.69104993586 81.987 2 -2.064372688625382 0.4490399298222814 1.0 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 48761 8048 KEQFRESEL True PC9_epitope_Rep3 1164.5775017848798 1164.57640993586 35.934 2 -2.0645508568672994 0.4490458965972839 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 27523 7343 FPGARAVA True PC9_epitope_Rep5 787.4340724568299 787.43296993586 33.205 2 -2.064717732527223 0.4490626929033236 1.0 ['ENST00000602529.1_1_1:228463365-228463719:-|nuORF'] 78129 17623 PAPFATSS True NCI_RA007_Epitope_Rep4 776.3704691407601 776.36936993586 76.242 2 -2.065027358774139 0.449090318388564 1.0 ['ENST00000274026.9_1_4:122744785-122745025:-|nuORF'] 134450 23757 WTIFLFLRWVL True PC9_epitope_Rep3 1492.8594777229198 1492.85838993586 96.666 2 -2.065742658062015 0.44912014727381017 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 90992 23920 RLKAGHGG True PC9_epitope_Rep2 794.4511195032999 794.45002993586 97.487 2 -2.065796997245794 0.44912014727381017 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 69617 26128 LVTVLQRRRP True H1975_Epitope_Rep3 1236.7778733572798 1236.77623490379 108.87 3 -2.0658157840245583 0.44912014727381017 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 34386 16688 GPSYGSQN True PC9_epitope_Rep6 808.3351462612001 808.33404993586 76.659 2 -2.065838935521224 0.44912014727381017 1.0 ['nc|ENSG00000105991|P49639-2|HOXA1', 'nc|ENSG00000105991|P49639-3|HOXA1', 'nc|ENSG00000105991|P49639|HOXA1', 'ENSG00000105991|ENST00000643460|HOXA1'] 107802 8013 TAPEKRSL True PC9_epitope_Rep4 900.5028802926399 900.50178993586 38.273 2 -2.065927882566014 0.44912014727381017 1.0 ['POU4F3|p.A282T|2|0.18|ENSG00000091010|chr5:146340271-146340271|G/A|missense_variant'] 140082 8510 YVNVQPQPQ True PC9_epitope_Rep4 1071.53490869691 1071.53380993586 40.209 2 -2.066153582668494 0.44914400805639476 1.0 ['nc|ENSG00000160446|Q96GR4-2|ZDHHC12', 'ENST00000467312.1_1_9:131483560-131485040:-|nuORF', 'ENSG00000160446|ENST00000372663|ZDHHC12', 'nc|ENSG00000160446|Q96GR4-3|ZDHHC12'] 126978 972 VPVVGKKA True NCI_RA007_Epitope_Rep1 796.5170738047998 796.51596993586 5.1298 2 -2.0663892393585845 0.44914400805639476 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 3417 6165 AGKSCGAG True NCI_RA007_Epitope_Rep1 649.28535961781 649.2848149679301 28.017 1 -2.0665221350180927 0.44914400805639476 1.0 ['ENSG00000140968|ENST00000268638|IRF8'] 31148 502 GDDNGSEDD True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 2.82 2 -2.06660884018247 0.44914400805639476 1.0 ['ESF1|p.D270N|1|0.15|ENSG00000089048|chr20:13776100-13776100|C/T|missense_variant'] 49566 22779 KKKDHLISGLL True PC9_epitope_Rep6 1250.7710566413398 1250.76994993586 100.71 2 -2.0668951487983747 0.44914997292907416 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 613 7152 AASMMKAR True H1975_Epitope_Rep3 864.4309783056799 864.4304249679301 32.482 1 -2.0670218333272086 0.44915107415107414 1.0 ['ENST00000472200.1_1_3:136538391-136538451:+|nuORF'] 32551 12134 GGTHSSDR True H1975_Epitope_Rep2 815.35219330767 815.35164496793 51.758 1 -2.0671254599720235 0.44915107415107414 1.0 ['ENSG00000156172|ENST00000286688|CFAP418'] 121945 5268 VGPRFAQICSY True PC9_epitope_Rep6 1239.6070280913498 1239.6053849037899 28.051 3 -2.067272208911359 0.44917869479064026 1.0 ['ENST00000366535.3_1_1:244579305-244580983:-|nuORF'] 34020 15364 GNKVTGTI True NCI_RA007_Epitope_Rep5 788.43921740692 788.43812993586 65.805 2 -2.0673830765369416 0.4491846590293869 1.0 ['ENSG00000081026|ENST00000307546|MAGI3', 'nc|ENSG00000081026|Q5TCQ9-1|MAGI3'] 90924 19777 RLEKLKLEL True H1975_Epitope_Rep2 1140.7230438197598 1140.72139490379 82.048 3 -2.0676108195252354 0.4491965871194075 1.0 ['AXIN2|p.N666Qfs*41|2|0.31|ENSG00000168646|chr17:65536466-65536467|-/C|frameshift_variant', 'AXIN2|p.E749Rfs*15|1|0.33|ENSG00000168646|chr17:65534072-65534073|-/T|frameshift_variant', 'ENSG00000168646|ENST00000307078|AXIN2', 'ENST00000577662.1_1_17:63534239-63554825:-|nuORF'] 60782 19937 LKFKSIKET True NCI_RA007_Epitope_Rep5 1092.6542955536 1092.6531899358602 83.603 2 -2.0676188606683783 0.4491965871194075 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 74774 20843 NLMDFVKKTG True PC9_epitope_Rep1 1151.60088008175 1151.6003749679298 85.0 1 -2.0677418287522333 0.44920475092300866 1.0 ['ENST00000599239.5_1_19:48565437-48599986:-|nuORF', 'ENST00000596510.5_1_19:48556252-48575644:-|nuORF', 'PLA2G4C|p.I518Sfs*2|1|0.08|ENSG00000105499|chr19:48053015-48053024|TCTCTAAGGA/-|frameshift_variant', 'nc|ENSG00000105499|Q9UP65-2|PLA2G4C', 'ENSG00000105499|ENST00000599921|PLA2G4C', 'nc|ENSG00000105499|Q9UP65-3|PLA2G4C'] 21925 13164 ESHGCPEV True NCI_RA007_Epitope_Rep5 856.33851738948 856.33742993586 57.313 2 -2.067842587202339 0.44920475092300866 1.0 ['ENST00000517353.5_1_8:82627029-82645114:-|nuORF', 'ENST00000519820.5_1_8:82626874-82633516:-|nuORF', 'nc|ENSG00000104231|Q8TCF1-4|ZFAND1', 'nc|ENSG00000104231|Q8TCF1-3|ZFAND1', 'ENSG00000104231|ENST00000220669|ZFAND1'] 92632 18078 RRFKPAGR True NCI_RA007_Epitope_Rep1 986.5886160356198 986.58750993586 74.46 2 -2.0680819937169326 0.44920475092300866 1.0 ['ENST00000529840.5_1_11:71189446-71191828:+|nuORF'] 86496 7150 QQYRWYQMLYQ True H1975_Epitope_Rep1 1605.73983316605 1605.7387299358602 32.526 2 -2.0683388139203185 0.44920475092300866 1.0 ['nc|ENSG00000261832|Q13286-3|CLN3', 'nc|ENSG00000261832|Q13286-7|CLN3', 'ENSG00000188603|ENST00000636147|CLN3', 'ENST00000563874.5_2_16:28488839-28493793:-|nuORF', 'nc|ENSG00000261832|Q13286-6|CLN3', 'nc|ENSG00000261832|Q13286-2|CLN3', 'nc|ENSG00000261832|Q13286-5|CLN3', 'ENST00000565140.5_3_16:28489128-28499933:-|nuORF'] 37624 25400 HAAAPGGG True H1975_Epitope_Rep3 636.2979729068401 636.29742496793 105.67 1 -2.068432847631261 0.44920475092300866 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 51900 21128 KKRRHLTPT True PC9_epitope_Rep6 1135.69380938015 1135.6927099358602 94.114 2 -2.068968131470228 0.4492215413265196 1.0 ['ENST00000555151.5_1_12:25348816-25348888:+|nuORF'] 32336 24137 GGASKWPV True NCI_RA007_Epitope_Rep5 800.4180880395198 800.41698993586 100.25 2 -2.069172363607337 0.44923833136645624 1.0 ['ENSG00000106236|ENST00000265634|NPTX2'] 59897 17057 LHHGPLCL True NCI_RA007_Epitope_Rep3 888.46399268612 888.46288993586 74.958 2 -2.0693339703471723 0.44925512104283055 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 91419 6460 RNKPPLGP True PC9_epitope_Rep1 877.5133854066898 877.5122899358599 29.653 2 -2.0697135043225803 0.4493054878906969 1.0 ['ENSG00000140807|ENST00000268459|NKD1'] 60807 23591 LKIVHILNMT True PC9_epitope_Rep4 1180.7002002002 1180.6991099358602 99.05 2 -2.069714381694541 0.4493054878906969 1.0 ['ENSG00000213341|ENST00000370397|CHUK'] 38204 25099 HETGHVLG True PC9_epitope_Rep2 848.41406528824 848.41296993586 102.21 2 -2.0697824989398477 0.4493054878906969 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ADAMTS3|p.M406I|1|0.25|ENSG00000156140|chr4:72319466-72319466|C/T|missense_variant', 'ADAMTS3|p.E407K|1|0.52|ENSG00000156140|chr4:72319465-72319465|C/T|missense_variant', 'ADAMTS3|p.G1177Vfs*27|1|0.22|ENSG00000156140|chr4:72283224-72283224|C/-|frameshift_variant', 'ENSG00000156140|ENST00000286657|ADAMTS3', 'nc|ENSG00000138316|Q8WXS8-2|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-3|ADAMTS14', 'ENSG00000138316|ENST00000373207|ADAMTS14', 'nc|ENSG00000138316|Q8WXS8-4|ADAMTS14'] 12220 16660 DIPMVCPD True PC9_epitope_Rep1 888.37212601688 888.37102993586 68.911 2 -2.0698267956086194 0.44931144985276283 1.0 ['ENSG00000204889|ENST00000377755|KRT40', 'CON__Q6IFU5', 'chr17:40984274-40986304|117|16.06|0.08|7.74|-|ENST00000461923|KRT40,KRT40'] 104431 19441 SSKKGKARL True H1975_Epitope_Rep2 973.6032630402498 973.60216993586 80.686 2 -2.0701478766062147 0.44932666493461504 1.0 ['ENSG00000155363|ENST00000369645|MOV10', 'ENST00000488160.5_1_1:113239361-113241636:+|nuORF', 'ENST00000482545.5_1_1:113239451-113241292:+|nuORF', 'ENST00000490413.1_1_1:113240935-113242190:+|nuORF', 'nc|ENSG00000155363|Q9HCE1-2|MOV10', 'ENST00000468624.5_1_1:113217534-113241292:+|nuORF', 'ENST00000496577.5_1_1:113231344-113241292:+|nuORF'] 137521 24033 YLQLLRTLE True PC9_epitope_Rep2 1147.6601092100298 1147.65900993586 97.94 2 -2.0701921569550534 0.44932666493461504 1.0 ['ENST00000306336.5_2_2:85835478-85835544:-|nuORF'] 79418 7003 PGPAGAPS True PC9_epitope_Rep4 652.31803964508 652.3174949679301 34.185 1 -2.0702764382081367 0.44932666493461504 1.0 ['ENST00000393760.5_1_10:99205993-99206050:+|nuORF', 'ENSG00000135925|ENST00000258411|WNT10A'] 107751 11471 TALVVVSIV True H1975_Epitope_Rep2 899.5691689473099 899.56806993586 49.178 2 -2.070430290263343 0.44932666493461504 1.0 ['nc|ENSG00000163235|P01135-2|TGFA', 'ENSG00000163235|ENST00000295400|TGFA', 'nc|ENSG00000163235|P01135-3|TGFA', 'nc|ENSG00000163235|P01135-5|TGFA', 'nc|ENSG00000163235|P01135-4|TGFA'] 5549 9991 ANIGPLLV True PC9_epitope_Rep6 795.48543932335 795.48434993586 48.986 2 -2.0704630113106206 0.44932666493461504 1.0 ['nc|ENSG00000101276|Q9NQ40-2|SLC52A3', 'ENSG00000101276|ENST00000645534|SLC52A3'] 29170 13862 FTYFYKRKEYW True NCI_RA007_Epitope_Rep2 1629.79799966517 1629.7969099358602 58.572 2 -2.07057762109792 0.44932666493461504 1.0 ['MMP16|p.G504R|1|0.24|ENSG00000156103|chr8:88041775-88041775|C/T|missense_variant'] 44712 16606 IPPMLIIF True NCI_RA007_Epitope_Rep3 942.5612471159 942.5606949679301 73.102 1 -2.0707076834391978 0.44932666493461504 1.0 ['ENSG00000179055|ENST00000641530|OR13D1', 'nc|ENSG00000179055|Q8NGV5|OR13D1'] 16977 12255 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 53.79 2 -2.0707777695557814 0.44932666493461504 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 139078 22427 YSLPRTWG True H1975_Epitope_Rep2 978.49231560894 978.49120993586 92.681 2 -2.0711480213505484 0.4493294801441699 1.0 ['nc|ENSG00000259009|P0DV77|TPRX2'] 13462 8940 DPARHNEF True PC9_epitope_Rep4 984.44134266524 984.44024993586 41.932 2 -2.0716671538860383 0.4493294801441699 1.0 ['nc|ENSG00000198682|O95340|PAPSS2', 'ENSG00000198682|ENST00000456849|PAPSS2'] 125097 27030 VLPGKKKKKT True PC9_epitope_Rep3 1125.75976368165 1125.75811490379 111.18 3 -2.0716779723825822 0.4493294801441699 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 80435 15408 PLKKSPSA True NCI_RA007_Epitope_Rep5 826.4912529797799 826.49014993586 65.967 2 -2.07176489017223 0.4493294801441699 1.0 ['ENSG00000198825|ENST00000650623|INPP5F', 'nc|ENSG00000198825|Q9Y2H2-4|INPP5F'] 49561 24893 KKKDHLISGLL True PC9_epitope_Rep1 1250.7710566413398 1250.76994993586 100.66 2 -2.07179325666499 0.4493294801441699 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 54589 6503 LADDHLIEV True NCI_RA007_Epitope_Rep1 1023.52367530687 1023.5225699358599 29.311 2 -2.071845389388109 0.4493294801441699 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000215859|A8MUH7-2|PDZK1P1', 'nc|ENSG00000215859|A8MUH7|PDZK1P1'] 90642 24085 RKKLYELLY True PC9_epitope_Rep2 1224.72304381976 1224.72139490379 98.144 3 -2.072018944276556 0.4493294801441699 1.0 ['ENST00000565367.5_1_15:55647651-55647789:+|nuORF'] 122268 22594 VGRRRTSR True PC9_epitope_Rep2 986.5845932843399 986.58404496793 92.408 1 -2.072304913713776 0.4493294801441699 1.0 ['ENST00000479747.1_1_9:130678457-130678682:-|nuORF'] 92407 17268 RQRRPRQIEA True NCI_RA007_Epitope_Rep5 1308.7486984873196 1308.74760993586 73.194 2 -2.0723495019971057 0.4493294801441699 1.0 ['ENSG00000103657|ENST00000443617|HERC1', 'HERC1|p.Q4385Sfs*5|1|0.44|ENSG00000103657|chr15:63626107-63626107|G/-|frameshift_variant'] 87131 20582 QSGNLALA True PC9_epitope_Rep6 772.40791727864 772.40682993586 91.897 2 -2.0723892786029587 0.4493294801441699 1.0 ['nc|ENSG00000011304|P26599-1|PTBP1', 'nc|ENSG00000011304|P26599-2|PTBP1', 'ENSG00000011304|ENST00000356948|PTBP1', 'ENST00000586944.5_1_19:797434-805231:+|nuORF'] 68359 18864 LTSLRKLWLMH True NCI_RA007_Epitope_Rep1 1396.8013112238 1396.80020993586 77.521 2 -2.0724702365788077 0.4493294801441699 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B', 'LRRC4B|p.G469Afs*22|1|0.4|ENSG00000131409|chr19:50518307-50518307|C/-|frameshift_variant'] 38288 22557 HFISLPPA True H1975_Epitope_Rep1 880.48068829608 880.47958993586 93.819 2 -2.0725865461972695 0.4493294801441699 1.0 ['BTNL3|p.S401Afs*7|1|0.3|ENSG00000168903|chr5:181005665-181005665|C/-|frameshift_variant'] 109329 22554 TGGPGGLLC True PC9_epitope_Rep2 773.37417462221 773.37362496793 92.245 1 -2.0726530632250797 0.4493294801441699 1.0 ['ENST00000569796.1_1_16:2282158-2283271:+|nuORF'] 30520 9765 GAIASRMS True H1975_Epitope_Rep1 791.39597269595 791.39486993586 42.491 2 -2.072703208118079 0.4493294801441699 1.0 ['nc|ENSG00000186575|P35240-2|NF2', 'nc|ENSG00000186575|P35240-4|NF2', 'nc|ENSG00000186575|P35240-6|NF2', 'nc|ENSG00000186575|P35240-5|NF2', 'nc|ENSG00000186575|P35240-8|NF2', 'nc|ENSG00000186575|P35240-3|NF2', 'ENSG00000186575|ENST00000338641|NF2', 'nc|ENSG00000186575|P35240-9|NF2', 'nc|ENSG00000186575|P35240-10|NF2', 'nc|ENSG00000186575|P35240-7|NF2'] 61093 23461 LLCLHLLIQ True PC9_epitope_Rep6 1064.64162269492 1064.64052993586 103.35 2 -2.0728459897095197 0.4493294801441699 1.0 ['ENST00000519416.5_2_8:38706173-38706524:+|nuORF'] 123033 21490 VGYGGSRHL True PC9_epitope_Rep2 944.4828135543999 944.4822649679301 88.132 1 -2.072960265507135 0.4493365370045674 1.0 ['ENST00000445155.5_3_10:106014771-106014894:+|nuORF'] 22805 18791 EVDSLAGWK True PC9_epitope_Rep5 1003.4974605590298 1003.49636993586 77.293 2 -2.072985147907652 0.4493365370045674 1.0 ['ENSG00000152315|ENST00000282146|KCNK13'] 52387 22960 KPGKMFVLR True PC9_epitope_Rep1 1074.6372060208198 1074.63610993586 93.118 2 -2.0731504644450496 0.4493365370045674 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 33102 24738 GKKKHRRRPS True PC9_epitope_Rep2 1248.7639546286398 1248.76284993586 100.83 2 -2.073520300698822 0.4493435934067123 1.0 ['ENSG00000186834|ENST00000332499|HEXIM1'] 106231 2740 SVPPHEADN True H1975_Epitope_Rep2 964.42502389476 964.42392993586 14.59 2 -2.073548117085005 0.4493435934067123 1.0 ['nc|ENSG00000143376|Q96L92-3|SNX27', 'ENSG00000143376|ENST00000458013|SNX27', 'nc|ENSG00000143376|Q96L92-2|SNX27', 'ENST00000368841.6_1_1:151584666-151666074:+|nuORF'] 52809 19658 KQTLALTLRK True PC9_epitope_Rep3 1170.7448418934998 1170.74320490379 80.85 3 -2.0736997512502335 0.4493435934067123 1.0 ['ENST00000428765.1_1_22:42834211-42836504:+|nuORF'] 35062 21531 GRGFSLKA True NCI_RA007_Epitope_Rep5 834.47118624154 834.47008993586 89.903 2 -2.0737485338129193 0.4493928440009524 1.0 ['nc|ENSG00000130684|Q9Y3M9-2|ZNF337', 'ENSG00000130684|ENST00000252979|ZNF337'] 52446 22780 KPGTVVARVS True PC9_epitope_Rep2 1012.6029286870798 1012.60182993586 93.111 2 -2.0738717089782037 0.4493939393939394 1.0 ['nc|ENSG00000141519|Q4G0X9-5|CCDC40'] 97301 15419 SFRWSLALSP True PC9_epitope_Rep2 1162.6134933707797 1162.6123899358602 64.588 2 -2.0739373969759214 0.4493939393939394 1.0 ['ENST00000477173.3_1_11:35006185-35041800:+|nuORF'] 81633 23775 PRRRRRREER True PC9_epitope_Rep2 1465.85629187369 1465.8551899358602 96.922 2 -2.074005828819137 0.4493998982694992 1.0 ['ENST00000361198.9_1_10:103874266-103874668:-|nuORF'] 90871 25098 RLAAAPPQ True NCI_RA007_Epitope_Rep5 822.47118624154 822.47008993586 104.04 2 -2.0741202796056406 0.4494033128847631 1.0 ['ENSG00000248713|ENST00000511828|C4orf54'] 47977 23613 KAFRRKLS True NCI_RA007_Epitope_Rep4 1004.6243328379999 1004.62322993586 102.43 2 -2.0743798512753977 0.4494033128847631 1.0 ['ENST00000593197.1_1_19:57021649-57037314:+|nuORF', 'ENSG00000196263|ENST00000308031|ZNF471'] 32382 12016 GGFDRGVP True H1975_Epitope_Rep3 803.3926015676699 803.3920549679301 51.38 1 -2.07445757971821 0.4494033128847631 1.0 ['ENST00000438684.1_1_2:234774587-234774704:-|nuORF'] 81136 16391 PPIMLIGH True NCI_RA007_Epitope_Rep4 876.4891448047999 876.48804993586 71.051 2 -2.07451171508795 0.4494033128847631 1.0 ['ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 108933 20573 TETKVTKTVKT True NCI_RA007_Epitope_Rep4 1234.7132669816997 1234.7121699358602 89.109 2 -2.074766302698325 0.4494033128847631 1.0 ['nc|ENSG00000099889|O00192-2|ARVCF', 'ENSG00000099889|ENST00000263207|ARVCF', 'ENST00000487793.5_1_22:19968732-19974706:-|nuORF', 'ENST00000473551.5_1_22:19968732-19978281:-|nuORF'] 140313 10050 YYDRHHHDSKR True NCI_RA007_Epitope_Rep5 1512.6970568372801 1512.6959499358602 45.297 2 -2.0748936911390325 0.4494033128847631 1.0 ['ENSG00000173575|ENST00000394196|CHD2'] 89693 21482 REWYKPLVWFW True PC9_epitope_Rep2 1608.8241548433598 1608.8230499358601 88.101 2 -2.0751888718673643 0.4494033128847631 1.0 ['nc|ENSG00000100433|P57789|KCNK10', 'nc|ENSG00000100433|P57789-4|KCNK10', 'ENSG00000100433|ENST00000319231|KCNK10'] 121911 23458 VGPLIPEQ True H1975_Epitope_Rep1 851.4752685624701 851.47472496793 97.481 1 -2.075204754732963 0.4494033128847631 1.0 ['ENSG00000181652|ENST00000639579|ATG9B', 'nc|ENSG00000181652|Q674R7-3|ATG9B'] 34179 5489 GPGGPKGG True H1975_Epitope_Rep1 625.31837399825 625.31782496793 26.174 1 -2.075269490638256 0.4494033128847631 1.0 ['ENSG00000116560|ENST00000357214|SFPQ', 'nc|ENSG00000116560|P23246-2|SFPQ'] 63665 24773 LPPKLRRQKAT True NCI_RA007_Epitope_Rep5 1306.8197381692598 1306.81864993586 102.78 2 -2.0755400556143333 0.4494033128847631 1.0 ['ENSG00000179715|ENST00000546455|PCED1B'] 113532 7444 TQTPDRHW True H1975_Epitope_Rep2 1039.4835418303899 1039.4824499358601 33.578 2 -2.075688686219633 0.4494033128847631 1.0 ['ENST00000601247.5_1_19:17858586-17877404:+|nuORF'] 128839 6896 VSSHYILE True PC9_epitope_Rep4 946.47599683846 946.47488993586 33.75 2 -2.0757157140609457 0.4494033128847631 1.0 ['nc|ENSG00000174791|Q13671-2|RIN1', 'ENSG00000174791|ENST00000311320|RIN1', 'ENST00000526246.5_1_11:66103079-66103478:-|nuORF'] 20162 9221 ENPERAALYF True NCI_RA007_Epitope_Rep3 1208.5825871653199 1208.5814899358602 43.367 2 -2.0757517289783927 0.4494033128847631 1.0 ['ENSG00000115363|ENST00000393913|EVA1A'] 67296 9521 LTDPFLERITE True H1975_Epitope_Rep3 1332.6925315371197 1332.69142993586 41.628 2 -2.0760454272040794 0.4494033128847631 1.0 ['ENSG00000197275|ENST00000336148|RAD54B'] 127424 21271 VQRNVSKL True PC9_epitope_Rep6 942.5610638750999 942.55996993586 94.672 2 -2.0760873717498067 0.4494033128847631 1.0 ['nc|ENSG00000185842|Q0VDD8-4|DNAH14', 'ENSG00000185842|ENST00000682510|DNAH14', 'nc|ENSG00000185842|Q0VDD8|DNAH14'] 116263 22972 TVVEKYKIYWV True PC9_epitope_Rep4 1426.7860379991398 1426.7849499358601 96.582 2 -2.076268203840273 0.4494033128847631 1.0 ['nc|ENSG00000156869|Q6ZNA5-2|FRRS1', 'ENSG00000156869|ENST00000646001|FRRS1'] 55203 18470 LAPLRVPI True PC9_epitope_Rep2 877.5749230340899 877.57382993586 76.377 2 -2.076269597868742 0.4494033128847631 1.0 ['ENST00000459892.5_1_2:26531956-26538428:-|nuORF', 'nc|ENSG00000173567|Q8IZF5-2|ADGRF3', 'nc|ENSG00000173567|Q8IZF5-3|ADGRF3', 'ENSG00000173567|ENST00000651242|ADGRF3', 'nc|ENSG00000173567|Q8IZF5|ADGRF3'] 61478 25775 LLFLFSQKELR True NCI_RA007_Epitope_Rep5 1392.8129214533199 1392.81182993586 106.69 2 -2.0763396159003156 0.4494033128847631 1.0 ['ENST00000370112.8_1_1:101376674-101377677:+|nuORF'] 23474 22663 EVYGFSMGK True NCI_RA007_Epitope_Rep5 1016.4637179025998 1016.46262993586 94.358 2 -2.076395091509451 0.4494033128847631 1.0 ['P3H2|p.H423Y|1|0.04|ENSG00000090530|chr3:189983103-189983103|G/A|missense_variant'] 113496 17928 TQSNLLSV True NCI_RA007_Epitope_Rep4 860.46034677432 860.45924993586 77.58 2 -2.0764150395812364 0.4494033128847631 1.0 ['nc|ENSG00000177595|Q9HB75-3|PIDD1', 'nc|ENSG00000177595|Q9HB75-2|PIDD1', 'ENSG00000177595|ENST00000347755|PIDD1', 'nc|ENSG00000177595|Q9HB75-4|PIDD1', 'ENST00000524486.5_1_11:799309-803120:-|nuORF', 'ENST00000527357.5_1_11:799813-799969:-|nuORF'] 83303 24626 QAIREAREQH True PC9_epitope_Rep3 1236.6323313224 1236.6306749037901 100.09 3 -2.0766285829514617 0.4494033128847631 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2', 'nc|ENSG00000079819|O43491-4|EPB41L2', 'nc|ENSG00000079819|O43491-3|EPB41L2', 'nc|ENSG00000079819|O43491-2|EPB41L2', 'ENST00000452150.6_1_6:131179278-131188835:-|nuORF', 'ENST00000368126.2_1_6:131179278-131186801:-|nuORF'] 48268 16811 KDKKGRAP True NCI_RA007_Epitope_Rep4 898.5348491272598 898.5343049679301 72.843 1 -2.0766681663128 0.4494033128847631 1.0 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 95313 9442 SAFGGHCY True NCI_RA007_Epitope_Rep5 840.32247340252 840.32136993586 42.956 2 -2.076782744440665 0.4494033128847631 1.0 ['ENST00000561765.1_1_16:1795016-1797040:+|nuORF'] 133706 22939 WLGAPPWG True PC9_epitope_Rep2 882.4388234840999 882.43772993586 93.732 2 -2.0769067707980073 0.4494033128847631 1.0 ['ENST00000514507.1_1_5:663600-666098:+|nuORF'] 120693 19873 VGAQKIPG True PC9_epitope_Rep3 768.4493881677998 768.44828993586 81.679 2 -2.0770487545533047 0.4494033128847631 1.0 ['ENSG00000079819|ENST00000337057|EPB41L2'] 56700 10227 LEAEIAYG True PC9_epitope_Rep3 864.4228986364399 864.42180993586 44.289 2 -2.0770784516546112 0.4494033128847631 1.0 ['LAGE3|p.H79Y|1|0.69|ENSG00000196976|chrX:154478365-154478365|G/A|missense_variant'] 121586 9297 VGLAAEPI True NCI_RA007_Epitope_Rep3 768.43815477776 768.43704993586 43.675 2 -2.0775353496196187 0.44941960470374415 1.0 ['ENST00000582625.1_1_17:77043224-77044167:+|nuORF'] 75319 26528 NPVPRVKHP True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 107.71 2 -2.077608451223593 0.44941960470374415 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133201285-133234573:-|nuORF'] 91404 16523 RNGGLLGR True NCI_RA007_Epitope_Rep5 841.48823328801 841.48712993586 70.317 2 -2.0776293383420184 0.44941960470374415 1.0 ['ENSG00000104549|ENST00000265896|SQLE'] 88750 4773 RDFPNRWEYYL True H1975_Epitope_Rep3 1557.73646203777 1557.73536993586 23.486 2 -2.077990200759693 0.44941960470374415 1.0 ['nc|ENSG00000120868|O14727-5|APAF1', 'nc|ENSG00000120868|O14727-3|APAF1', 'nc|ENSG00000120868|O14727-4|APAF1', 'nc|ENSG00000120868|O14727-2|APAF1', 'ENSG00000120868|ENST00000551964|APAF1'] 32158 22384 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 93.266 2 -2.0782656468609866 0.44941960470374415 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 20393 23209 EPLPLAYA True NCI_RA007_Epitope_Rep2 872.4643695255999 872.46326993586 96.97 2 -2.0782781328000626 0.44941960470374415 1.0 ['ENSG00000142619|ENST00000375460|PADI3'] 115237 17241 TVDCLLEFSKT True NCI_RA007_Epitope_Rep5 1254.6165897155397 1254.61495490379 73.092 3 -2.078659363071367 0.44941960470374415 1.0 ['ENST00000371322.9_2_X:119659046-119659109:-|nuORF'] 126545 23073 VPPEGLMC True H1975_Epitope_Rep1 844.38229677776 844.38118993586 95.949 2 -2.0786616696142834 0.44941960470374415 1.0 ['ENST00000483208.5_2_15:42694887-42695976:+|nuORF'] 86553 24661 QRAPKPLPRV True PC9_epitope_Rep6 1160.71421047156 1160.71310993586 109.36 2 -2.078734932913763 0.44941960470374415 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 86411 25485 QQPLKQLT True PC9_epitope_Rep2 954.5498304850599 954.54872993586 103.71 2 -2.078778765527725 0.44941960470374415 1.0 ['nc|ENSG00000174197|Q8IWI9-3|MGA', 'nc|ENSG00000174197|Q8IWI9|MGA', 'ENSG00000174197|ENST00000703841|MGA', 'MGA|p.L2495Sfs*11|1|0.15|ENSG00000174197|chr15:41761821-41761822|-/A|frameshift_variant', 'MGA|p.T1565Hfs*11|1|0.37|ENSG00000174197|chr15:41742650-41742650|G/-|frameshift_variant'] 14537 14423 DVDAYLLQL True NCI_RA007_Epitope_Rep2 1048.54407639828 1048.5429699358601 60.764 2 -2.0788599283583227 0.4494206990555934 1.0 ['ENST00000562413.2_1_6:147123933-147123996:-|nuORF', 'ENSG00000134152|ENST00000256544|KATNBL1'] 11551 20456 DGPGNTLAH True H1975_Epitope_Rep2 880.4038945273601 880.40278993586 84.747 2 -2.078887249323014 0.4494206990555934 1.0 ['ENST00000533366.5_1_11:102395628-102401431:-|nuORF', 'ENSG00000137673|ENST00000260227|MMP7'] 36868 6550 GVQCFSRYP True PC9_epitope_Rep5 1055.48585032951 1055.48474993586 30.168 2 -2.079141184428843 0.4494699264387711 1.0 ['CON__Q9U6Y5'] 33130 15908 GKPKTTTT True NCI_RA007_Epitope_Rep5 832.46543215476 832.46432993586 67.917 2 -2.0792433120810863 0.4494758819138694 1.0 ['ENST00000352536.7_1_6:117593658-117593937:+|nuORF'] 69616 26049 LVTVLQRRRP True H1975_Epitope_Rep3 1236.7778733572798 1236.77623490379 108.53 3 -2.079510295899375 0.44948183726011987 1.0 ['ENSG00000198569|ENST00000673835|SLC34A3'] 125042 8558 VLPGAYKK True NCI_RA007_Epitope_Rep4 874.5276384885 874.52654993586 39.705 2 -2.079778896804995 0.44950942743095745 1.0 ['ENST00000468490.1_1_5:50571220-50571544:+|nuORF'] 37816 23306 HDDFADDISL True PC9_epitope_Rep6 1146.4829326937 1146.48127490379 102.75 3 -2.0799837576133164 0.44955865172428716 1.0 ['nc|ENSG00000186318|P56817-6|BACE1', 'nc|ENSG00000186318|P56817-5|BACE1', 'nc|ENSG00000186318|P56817-4|BACE1', 'nc|ENSG00000186318|P56817-3|BACE1', 'nc|ENSG00000186318|P56817-2|BACE1', 'ENSG00000186318|ENST00000313005|BACE1'] 34000 22241 GNHPWPLE True PC9_epitope_Rep6 948.4453654165198 948.44426993586 98.507 2 -2.0804139770323102 0.44957542322462 1.0 ['ENST00000587091.5_2_X:73751613-73751946:+|nuORF'] 137956 18746 YPVLAPAA True PC9_epitope_Rep3 800.4432401582 800.44214993586 77.329 2 -2.0807347177325557 0.4495873311194522 1.0 ['nc|ENSG00000134644|Q14671-2|PUM1', 'nc|ENSG00000134644|Q14671|PUM1', 'ENSG00000134644|ENST00000426105|PUM1', 'nc|ENSG00000134644|Q14671-4|PUM1', 'ENST00000490546.1_1_1:31439047-31452930:-|nuORF'] 16973 11750 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 51.854 2 -2.080752159935344 0.4495873311194522 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 35840 19737 GVAAAGHA True PC9_epitope_Rep1 652.3292730351201 652.32872496793 80.747 1 -2.080996283921442 0.44959923849906436 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 128283 25033 VSARIVTA True PC9_epitope_Rep5 815.4865019525099 815.4859549679301 101.43 1 -2.0811578057451667 0.44959923849906436 1.0 ['ENST00000471887.1_1_7:18557286-18557502:+|nuORF'] 23418 19455 EVVPLCLPAP True NCI_RA007_Epitope_Rep4 1036.5627036678798 1036.5616099358601 84.101 2 -2.081403389122264 0.4496160086533261 1.0 ['DUSP2|p.Q303Sfs*80|1|0.27|ENSG00000158050|chr2:96143862-96143862|C/-|frameshift_variant', 'ENST00000288943.4_1_2:96809359-96809716:-|nuORF'] 87878 22367 QVLKGMFV True PC9_epitope_Rep5 920.5153595526399 920.5142699358599 91.046 2 -2.0819258909186478 0.44965441152610575 1.0 ['nc|ENSG00000110911|P49281-5|SLC11A2', 'ENSG00000110911|ENST00000262052|SLC11A2', 'nc|ENSG00000110911|P49281|SLC11A2', 'nc|ENSG00000110911|P49281-3|SLC11A2', 'nc|ENSG00000110911|P49281-4|SLC11A2'] 133630 25549 WKKGRQQI True PC9_epitope_Rep3 1042.60359739342 1042.60250993586 103.76 2 -2.082123955193745 0.4496603642971488 1.0 ['ENST00000479647.1_1_3:196664263-196668636:-|nuORF'] 36578 9436 GVLFFADD True NCI_RA007_Epitope_Rep3 882.4123339527399 882.41122993586 44.198 2 -2.08240419683776 0.4496771332460818 1.0 ['ENSG00000112309|ENST00000230053|B3GAT2'] 35065 22194 GRGQVKKG True PC9_epitope_Rep2 828.4929843152798 828.49188993586 90.854 2 -2.083161920339916 0.44974637955462304 1.0 ['nc|ENSG00000135597|Q96D71-2|REPS1', 'nc|ENSG00000135597|Q96D71-4|REPS1', 'nc|ENSG00000135597|Q96D71-3|REPS1', 'ENSG00000135597|ENST00000450536|REPS1'] 125219 14429 VLQPQRVL True PC9_epitope_Rep4 951.5865503469498 951.58544993586 63.41 2 -2.083458485712159 0.44974637955462304 1.0 ['ENSG00000106268|ENST00000356714|NUDT1', 'nc|ENSG00000106268|P36639-3|NUDT1', 'nc|ENSG00000106268|P36639-2|NUDT1', 'nc|ENSG00000106268|P36639-1|NUDT1'] 136089 9603 YGCSSLVYLR True PC9_epitope_Rep4 1159.5695799534699 1159.56793490379 44.562 3 -2.0834922599333474 0.44974637955462304 1.0 ['OR10Q1|p.C260S|1|0.32|ENSG00000180475|chr11:58228098-58228098|A/T|missense_variant'] 137525 6617 YLQPGTSN True H1975_Epitope_Rep3 878.4133965819001 878.41284496793 30.404 1 -2.083570202494111 0.44974637955462304 1.0 ['ENSG00000234828|ENST00000636793|IQCM'] 49565 23976 KKKDHLISGLL True PC9_epitope_Rep4 1250.7710566413398 1250.76994993586 100.69 2 -2.0836363737822805 0.44974637955462304 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 63685 6158 LPPTTELE True PC9_epitope_Rep6 898.46476344842 898.46366993586 32.123 2 -2.0837001780873785 0.44974637955462304 1.0 ['ENSG00000140575|ENST00000268182|IQGAP1', 'IQGAP1|p.P711Qfs*22|1|0.49|ENSG00000140575|chr15:90467544-90467544|T/-|frameshift_variant', 'ENST00000560418.1_2_15:90931626-90974461:+|nuORF', 'IQGAP1-CRTC3|1|fusion', 'IQGAP1-CRTC3|2|fusion', 'ENSG00000145703|ENST00000274364|IQGAP2'] 59619 18452 LGSGVPLPK True PC9_epitope_Rep1 866.52255310806 866.52144993586 75.767 2 -2.0837006237199405 0.44974637955462304 1.0 ['ENSG00000186191|ENST00000375483|BPIFB4', 'nc|ENSG00000186191|P59827-2|BPIFB4'] 38863 25009 HIHLILLFR True PC9_epitope_Rep6 1160.7182332228401 1160.7171299358602 111.17 2 -2.0837139843943753 0.44974637955462304 1.0 ['ENST00000382151.6_1_22:32015035-32015164:-|nuORF'] 133318 7718 WERDGAPSPMM True NCI_RA007_Epitope_Rep3 1275.5376282021898 1275.53652993586 37.481 2 -2.0837239587153435 0.4497523306872012 1.0 ['ENSG00000047315|ENST00000314595|POLR2B'] 92304 22141 RQLLKMRRCA True PC9_epitope_Rep6 1273.72234971045 1273.7212499358602 98.108 2 -2.0837704205116787 0.4497593684096685 1.0 ['ENST00000257637.7_1_7:86848977-86849043:-|nuORF'] 94271 15734 RWSADPAA True NCI_RA007_Epitope_Rep5 872.4140652882398 872.41296993586 67.238 2 -2.0838103962387207 0.4497593684096685 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 36975 22849 GVRLQRREEP True PC9_epitope_Rep5 1238.6843668952597 1238.6832699358602 92.884 2 -2.0843129684253796 0.4497593684096685 1.0 ['ENST00000602438.1_1_19:19260237-19296893:-|nuORF'] 71648 19342 MLRIWRVKSVI True NCI_RA007_Epitope_Rep3 1399.84859576939 1399.84748993586 84.437 2 -2.0845048619800015 0.4497712697502893 1.0 ['TMEM266|p.R214S|1|0.25|ENSG00000169758|chr15:76171121-76171121|G/T|missense_variant'] 85273 3803 QKRNLSQRHPL True PC9_epitope_Rep4 1375.7796642624298 1375.77802490379 20.791 3 -2.084557605942182 0.4497712697502893 1.0 ['ENST00000395442.5_1_10:55568369-55568990:-|nuORF'] 133775 7085 WLPGGIKL True PC9_epitope_Rep2 882.53272386894 882.53162993586 32.648 2 -2.0848384296051625 0.4498047994463009 1.0 ['ENST00000487841.5_1_6:166738023-166743732:-|nuORF', 'ENSG00000198818|ENST00000361731|SFT2D1'] 45685 20050 ISKWNNRV True PC9_epitope_Rep5 1015.55631284783 1015.55520993586 82.176 2 -2.0850004477567534 0.4498047994463009 1.0 ['ENST00000470936.1_1_3:69134198-69151212:+|nuORF', 'ENSG00000144746|ENST00000273258|ARL6IP5'] 120577 19528 VGAFLKNA True H1975_Epitope_Rep3 818.46503823194 818.46394993586 81.829 2 -2.085160796336465 0.44981669928950696 1.0 ['ENSG00000170906|ENST00000485876|NDUFA3'] 125547 24901 VLWSRNRL True NCI_RA007_Epitope_Rep1 1042.60359739342 1042.60250993586 103.06 2 -2.0851781063462864 0.44981669928950696 1.0 ['ENST00000517465.1_1_8:103270587-103274193:-|nuORF'] 22821 17317 EVEDCYERE True H1975_Epitope_Rep2 1170.44991831326 1170.4488299358602 71.904 2 -2.085677488501621 0.4498177846506548 1.0 ['nc|ENSG00000198947|P11532|DMD', 'ENSG00000198947|ENST00000357033|DMD', 'DMD|p.D2697Gfs*13|1|0.6|ENSG00000198947|chrX:31627802-31627803|-/A|frameshift_variant', 'DMD|p.L1312Ffs*8|1|0.52|ENSG00000198947|chrX:32438376-32438377|-/A|frameshift_variant', 'ENST00000488902.5_1_X:32235174-33229429:-|nuORF'] 81103 24237 PPGNWPGP True PC9_epitope_Rep3 820.3867879112399 820.38568993586 98.528 2 -2.085693672774033 0.4498177846506548 1.0 ['ENST00000557552.1_1_14:105238371-105239528:-|nuORF'] 116624 16720 TYHMWWVCFWH True H1975_Epitope_Rep2 1594.66383177482 1594.6627299358602 69.55 2 -2.085805673464602 0.4498188699648554 1.0 ['ENST00000523237.1_1_8:1721944-1728730:+|nuORF', 'ENSG00000182372|ENST00000331222|CLN8'] 125582 23011 VLYVDPMIT True PC9_epitope_Rep5 1049.5467192505698 1049.54617496793 93.502 1 -2.0859302981154695 0.4498188699648554 1.0 ['nc|ENSG00000162594|Q5VWK5-5|IL23R', 'nc|ENSG00000162594|Q5VWK5-6|IL23R', 'nc|ENSG00000162594|Q5VWK5-2|IL23R', 'ENSG00000162594|ENST00000347310|IL23R', 'nc|ENSG00000162594|Q5VWK5-7|IL23R'] 118865 10456 VEELILPG True NCI_RA007_Epitope_Rep4 868.4905842734399 868.49003496793 47.068 1 -2.086202694754197 0.4498248194126043 1.0 ['ENST00000476287.3_1_6:170714796-170714856:+|nuORF'] 4244 12354 AIGTEAQRV True PC9_epitope_Rep2 943.5086939490699 943.50758993586 52.83 2 -2.0862529843437194 0.44982590453945803 1.0 ['ENST00000579585.5_1_17:61771267-61771504:+|nuORF'] 74707 24739 NLKLKKPP True H1975_Epitope_Rep3 936.6120368188 936.61092993586 102.9 2 -2.086270801741257 0.44982590453945803 1.0 ['ENST00000593607.1_1_19:54120057-54120405:+|nuORF', 'ENST00000510556.1_1_4:109571811-109578607:+|nuORF', 'ENST00000424397.2_1_4:113606219-113606393:+|nuORF', 'ENSG00000198856|ENST00000361564|OSTC', 'nc|ENSG00000198856|Q9NRP0-2|OSTC'] 68514 27125 LTVQDVYYL True PC9_epitope_Rep5 1112.57537652656 1112.57426993586 111.05 2 -2.086348112643161 0.4498280746523648 1.0 ['CDH18|p.R558L|1|0.21|ENSG00000145526|chr5:19483510-19483510|C/A|missense_variant'] 64365 24582 LQPKPVVL True H1975_Epitope_Rep3 892.5745886809199 892.57348993586 102.29 2 -2.086399168441359 0.4498280746523648 1.0 ['nc|ENSG00000213676|Q99941-2|ATF6B', 'ENSG00000213676|ENST00000375203|ATF6B', 'ENST00000495579.5_1_6:32088425-32095984:-|nuORF'] 135975 24855 YFEAYRHVL True PC9_epitope_Rep2 1196.59784330664 1196.59674993586 101.29 2 -2.0864962215740124 0.4498280746523648 1.0 ['ENSG00000124201|ENST00000396105|ZNFX1', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 41403 24892 IARIPLLRDS True NCI_RA007_Epitope_Rep5 1152.69789170108 1152.69737496793 103.24 1 -2.0866973380085603 0.4498280746523648 1.0 ['DCAF12L1|p.W220Cfs*93|1|0.44|ENSG00000198889|chrX:126551949-126551949|C/-|frameshift_variant', 'ENSG00000198889|ENST00000371126|DCAF12L1'] 85799 16778 QLWWRNWFWVH True PC9_epitope_Rep2 1656.8102361147198 1656.80912993586 69.784 2 -2.0868372796448456 0.4498399723195364 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 120027 8006 VFDVTAVN True PC9_epitope_Rep1 863.4388830537499 863.43778993586 35.616 2 -2.0869399045757713 0.4498399723195364 1.0 ['nc|ENSG00000149177|Q12913-3|PTPRJ', 'ENSG00000149177|ENST00000418331|PTPRJ', 'nc|ENSG00000149177|Q12913-2|PTPRJ'] 109922 9367 THQWRLGEPIE True PC9_epitope_Rep1 1364.6836981889198 1364.68260993586 40.887 2 -2.087221111731813 0.44985186947213635 1.0 ['ENSG00000197629|ENST00000361050|MPEG1'] 114499 10081 TSFPTQGK True PC9_epitope_Rep4 864.4341320264799 864.43302993586 46.447 2 -2.087277816559172 0.44985186947213635 1.0 ['nc|ENSG00000139364|Q14DG7|TMEM132B', 'ENSG00000139364|ENST00000682704|TMEM132B', 'nc|ENSG00000139364|Q14DG7-3|TMEM132B'] 6629 19649 APWVCLQKKL True NCI_RA007_Epitope_Rep2 1184.6739854523598 1184.67347496793 81.379 1 -2.0875225667608235 0.44985295389672175 1.0 ['ENST00000361436.9_1_9:130211929-130213053:-|nuORF'] 86318 13926 QQHSGGSS True NCI_RA007_Epitope_Rep3 786.32564420666 786.32454993586 62.09 2 -2.0875388322453383 0.44985295389672175 1.0 ['nc|ENSG00000184716|A6NH21|SERINC4'] 90183 15949 RHGRASAT True NCI_RA007_Epitope_Rep4 854.44709675202 854.44598993586 69.218 2 -2.0879194439641053 0.4498589021397139 1.0 ['nc|ENSG00000125779|Q9BZ23-3|PANK2', 'ENSG00000125779|ENST00000610179|PANK2', 'nc|ENSG00000125779|Q9BZ23|PANK2'] 71267 17571 MGPRIREALRR True NCI_RA007_Epitope_Rep4 1353.77755608745 1353.77644993586 76.035 2 -2.0883491609233418 0.44987079823982873 1.0 ['chr14:24211581-24211680|275|28.39|0.0|21.44|-|0|None,CHMP4A|1'] 121157 6693 VGGGTREL True PC9_epitope_Rep5 787.41881631551 787.41770993586 30.717 2 -2.088436822338301 0.44987079823982873 1.0 ['ENST00000587406.5_1_19:19230741-19232328:-|nuORF'] 64031 18527 LQDEYWVII True PC9_epitope_Rep5 1177.60192562757 1177.60082993586 76.288 2 -2.0884872428379833 0.44987782991329167 1.0 ['ENSG00000071991|ENST00000262150|CDH19', 'nc|ENSG00000071991|Q9H159-2|CDH19'] 135319 21502 YCPACLVT True H1975_Epitope_Rep2 868.38229677776 868.38118993586 88.965 2 -2.0888751712329516 0.44987782991329167 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'HELZ2|p.N341Ifs*23|1|0.12|ENSG00000130589|chr20:63569211-63569214|TAGT/-|frameshift_variant', 'ENST00000370082.1_1_20:62201547-62204491:-|nuORF'] 49563 24704 KKKDHLISGLL True PC9_epitope_Rep2 1250.7710566413398 1250.76994993586 100.7 2 -2.0889444264301025 0.44987782991329167 1.0 ['ENST00000313833.4_1_14:55817358-55817442:+|nuORF'] 21414 9737 ERNLLRVWS True PC9_epitope_Rep5 1171.6461904813898 1171.64455490379 42.423 3 -2.0894302383599683 0.4499054002919077 1.0 ['chr10:5007506-5008028|141|17.49|0.0|13.03|-|1|TE_info:MST-int,MST-int_dup132,ERVL-MaLR,LTR,donor,-,5008028,5008356|AKR1C2,None|1'] 53421 25061 KVGPGNHG True H1975_Epitope_Rep1 764.39293592084 764.39182993586 103.78 2 -2.0895550669684626 0.4499064834535174 1.0 ['ENSG00000008952|ENST00000337002|SEC62'] 30965 5665 GASVDGENKP True PC9_epitope_Rep1 972.4512386426 972.4501499358599 26.612 2 -2.089589592066444 0.4499064834535174 1.0 ['ENSG00000139174|ENST00000345127|PRICKLE1'] 121385 21735 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 90.715 2 -2.0900701306027125 0.4499232415836018 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 35898 14073 GVAGRHLL True PC9_epitope_Rep2 821.4871706588499 821.4866249679301 59.407 1 -2.0901879714935916 0.4499399993513443 1.0 ['ENST00000372429.7_1_9:132637899-132641867:+|nuORF'] 123366 18872 VIAHCGMH True H1975_Epitope_Rep3 866.3891134937 866.3880099358599 79.16 2 -2.0906026959934563 0.44996756756756756 1.0 ['nc|ENSG00000121210|A2VDJ0-6|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-3|TMEM131L', 'nc|ENSG00000121210|A2VDJ0|TMEM131L', 'ENSG00000121210|ENST00000409959|TMEM131L', 'nc|ENSG00000121210|A2VDJ0-2|TMEM131L'] 54689 19076 LAEEFSIPVSF True PC9_epitope_Rep1 1237.6230549949698 1237.6213949037901 78.165 3 -2.0909176747488565 0.44997189432265317 1.0 ['ENST00000474051.1_1_14:68352547-68354002:+|nuORF'] 78557 14432 PDPGACPD True NCI_RA007_Epitope_Rep5 770.2905045679 770.28995496793 62.194 1 -2.091051009353051 0.44997189432265317 1.0 ['nc|ENSG00000197558|A2VEC9|SSPOP'] 14587 13686 DVGRRRKH True PC9_epitope_Rep5 1022.5845932843399 1022.58348993586 57.67 2 -2.0914748908890246 0.44997189432265317 1.0 ['nc|ENSG00000173040|Q86UK5-3|EVC2', 'ENSG00000173040|ENST00000344408|EVC2', 'nc|ENSG00000173040|Q86UK5-2|EVC2'] 95919 24320 SDVVEVRLANR True PC9_epitope_Rep4 1256.6836981889198 1256.68260993586 102.03 2 -2.091506619330912 0.44997189432265317 1.0 ['ENSG00000099994|ENST00000358321|SUSD2', 'ENST00000463101.1_1_22:24579934-24582448:+|nuORF'] 121375 20301 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 85.027 2 -2.091972275197681 0.44997189432265317 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 21840 7462 ESDYVAFK True H1975_Epitope_Rep2 957.4443623570099 957.44326993586 33.65 2 -2.09208652122717 0.44997189432265317 1.0 ['ENSG00000105877|ENST00000409508|DNAH11', 'DNAH11|p.T2517Qfs*4|1|0.27|ENSG00000105877|chr7:21735744-21735744|A/-|frameshift_variant'] 134948 23503 YAFFLFCRAF True PC9_epitope_Rep5 1283.6161362230698 1283.61502993586 95.386 2 -2.0921169423271575 0.44997189432265317 1.0 ['ENST00000557491.1_1_14:89075566-89075752:+|nuORF'] 71178 21864 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 91.226 2 -2.09214483328102 0.44997189432265317 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 47983 13116 KAGGGGGK True H1975_Epitope_Rep1 630.3449230992601 630.3443749679301 55.542 1 -2.092245317392294 0.449988649752997 1.0 ['ENSG00000105675|ENST00000262623|ATP4A', 'ATP4A|p.V320Cfs*26|1|0.36|ENSG00000105675|chr19:35559903-35559904|-/A|frameshift_variant'] 74911 8007 NLSEGLINEA True H1975_Epitope_Rep2 1058.52440358286 1058.5233099358602 35.746 2 -2.093385183218453 0.4500270241055021 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'nc|ENSG00000115464|Q70CQ2-3|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 78676 4189 PECFVVGK True PC9_epitope_Rep1 877.4367748787698 877.43566993586 21.008 2 -2.09354035099495 0.45004972327914217 1.0 ['nc|ENSG00000146872|Q86UE8-3|TLK2', 'ENSG00000146872|ENST00000346027|TLK2', 'nc|ENSG00000146872|Q86UE8|TLK2', 'ENST00000530992.1_1_17:32364642-32365872:-|nuORF', 'nc|ENSG00000198586|Q9UKI8-3|TLK1', 'nc|ENSG00000198586|Q9UKI8-4|TLK1', 'nc|ENSG00000198586|Q9UKI8-5|TLK1', 'ENSG00000198586|ENST00000431350|TLK1', 'nc|ENSG00000198586|Q9UKI8-2|TLK1'] 53552 23445 KVRFKKVEF True H1975_Epitope_Rep1 1179.7128134892298 1179.7111649037902 97.429 3 -2.0936288449522094 0.45004972327914217 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49'] 36252 14960 GVGGPFPA True PC9_epitope_Rep4 700.3544251538 700.3538749679301 65.483 1 -2.0939811837599596 0.4500508031216897 1.0 ['ENST00000375151.4_1_X:54471110-54471305:+|nuORF'] 45178 9826 IRELQQQIEDL True NCI_RA007_Epitope_Rep4 1383.73579333143 1383.7346899358602 44.644 2 -2.0941670250953175 0.4500508031216897 1.0 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 16052 5389 EEANLGLP True PC9_epitope_Rep6 841.4181476091699 841.41704993586 28.608 2 -2.0943994848906367 0.45006755661244124 1.0 ['nc|ENSG00000152270|Q13370-2|PDE3B', 'ENSG00000152270|ENST00000282096|PDE3B'] 91612 22397 RPEKDFTE True NCI_RA007_Epitope_Rep5 1020.4876241513199 1020.48652993586 93.317 2 -2.094812220127856 0.4500902536831069 1.0 ['ENSG00000124831|ENST00000308482|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-3|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4-2|LRRFIP1', 'nc|ENSG00000124831|Q32MZ4|LRRFIP1'] 109356 10134 TGILFPPGSCL True PC9_epitope_Rep1 1103.5685173243098 1103.56740993586 43.855 2 -2.095308619704726 0.4500902536831069 1.0 ['ENST00000375893.6_1_6:31632636-31633398:-|nuORF', 'ENST00000375895.6_1_6:31632636-31633491:-|nuORF'] 3586 21451 AGPGKAAARA True PC9_epitope_Rep4 868.4878989348399 868.48680993586 90.699 2 -2.0954098537049046 0.45009564775687094 1.0 ['ENST00000266269.9_2_22:31741867-31742074:-|nuORF'] 112908 9956 TPQEVTQIPQ True NCI_RA007_Epitope_Rep3 1139.5822528121498 1139.5811499358601 46.247 2 -2.095455588191108 0.45009564775687094 1.0 ['ENST00000514498.1_1_4:166327046-166327295:-|nuORF'] 38540 21750 HHEKKKAGYI True PC9_epitope_Rep6 1209.6618405455297 1209.66019490379 96.554 3 -2.0955601082910924 0.45009564775687094 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.G2269Afs*6|1|0.24|ENSG00000158683|chr7:47827398-47827398|C/-|frameshift_variant', 'PKD1L1|p.R1956Pfs*77|1|0.33|ENSG00000158683|chr7:47836996-47836997|GC/-|frameshift_variant'] 116405 23896 TWIPGKAV True NCI_RA007_Epitope_Rep2 870.4963383602199 870.49524993586 100.32 2 -2.095802717291555 0.45009564775687094 1.0 ['ENST00000377186.3_1_6:28911664-28912021:+|nuORF'] 44866 6489 IQALEDTH True PC9_epitope_Rep1 925.4505103666099 925.44940993586 29.764 2 -2.0959328778665944 0.45009564775687094 1.0 ['nc|ENSG00000126464|Q9ULL5-2|PRR12', 'ENSG00000126464|ENST00000418929|PRR12'] 64765 17481 LRRVLDTA True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 74.026 2 -2.095970171116841 0.45009564775687094 1.0 ['ENSG00000102901|ENST00000562787|CENPT', 'ENST00000436104.6_1_16:67865250-67867798:-|nuORF', 'nc|ENSG00000102901|Q96BT3-2|CENPT', 'ENST00000565157.5_1_16:67864257-67867798:-|nuORF', 'nc|ENSG00000102901|Q96BT3-3|CENPT', 'ENST00000564128.1_1_16:67866129-67867804:-|nuORF', 'ENST00000569862.5_1_16:67865986-67867804:-|nuORF'] 10581 20162 CRPRCRRRRRR True PC9_epitope_Rep6 1569.8905862907698 1569.8894899358602 90.226 2 -2.0962795439727153 0.45009564775687094 1.0 ['ENST00000447274.6_1_11:67056466-67056871:+|nuORF'] 118123 13942 VAVAVTRSL True PC9_epitope_Rep4 914.5549158655 914.55380993586 61.532 2 -2.0963049766428092 0.45009564775687094 1.0 ['ENST00000395756.5_1_17:17715938-17721122:-|nuORF'] 33606 9545 GLLLEYEAQ True PC9_epitope_Rep5 1034.52842633414 1034.52732993586 41.672 2 -2.0963804224675227 0.45009564775687094 1.0 ['ENSG00000176422|ENST00000338146|SPRYD4'] 54990 17514 LAIIVYMVP True NCI_RA007_Epitope_Rep3 1017.5932755201699 1017.5921699358599 76.853 2 -2.0966789191364534 0.45009564775687094 1.0 ['ENSG00000142494|ENST00000270570|SLC47A1', 'nc|ENSG00000142494|Q96FL8-3|SLC47A1', 'ENST00000495425.6_1_17:19458825-19480863:+|nuORF'] 120669 12257 VGAPGGVP True H1975_Epitope_Rep1 652.3544251538 652.3538749679301 52.17 1 -2.0969544316131565 0.4501123984091302 1.0 ['ENST00000392587.6_1_6:110500769-110500865:-|nuORF'] 26649 14949 FLAFLYAL True NCI_RA007_Epitope_Rep4 956.53714054304 956.53604993586 64.966 2 -2.0978305100566783 0.45013995612186447 1.0 ['ENSG00000198964|ENST00000361781|SGMS1'] 52386 19042 KPGKMFVLR True NCI_RA007_Epitope_Rep2 1074.6372060208198 1074.63610993586 78.921 2 -2.0981937298626976 0.4501783205446882 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 104172 15832 SSCMTMGT True NCI_RA007_Epitope_Rep5 816.28159676032 816.28048993586 67.62 2 -2.098334032242145 0.45018426257146255 1.0 ['ENST00000437519.5_1_12:123892173-123892242:+|nuORF'] 125311 18875 VLRVARRQLS True NCI_RA007_Epitope_Rep4 1196.7465732289998 1196.74492490379 81.627 3 -2.099019433513206 0.4502010115419531 1.0 ['ENST00000595115.1_1_19:44030583-44031338:-|nuORF', 'ENSG00000105755|ENST00000292147|ETHE1'] 40034 15990 HQVMAKPSVY True NCI_RA007_Epitope_Rep5 1158.5855643707798 1158.5844699358602 68.234 2 -2.099172160197326 0.45020695319507636 1.0 ['SPIN4|p.V224M|1|0.23|ENSG00000186767|chrX:63350150-63350150|C/T|missense_variant'] 54962 13581 LAHSPGGG True H1975_Epitope_Rep1 694.33983771882 694.3392849679301 57.368 1 -2.0992668260051066 0.4502080293942832 1.0 ['ENST00000441363.1_1_6:73973136-74009049:+|nuORF'] 3712 13521 AGSLHPGA True NCI_RA007_Epitope_Rep1 708.3554877829599 708.35493496793 56.602 1 -2.099516204263018 0.4502080293942832 1.0 ['ENST00000423473.6_1_17:20898860-20901274:+|nuORF'] 49162 17104 KGPARQAK True NCI_RA007_Epitope_Rep2 854.5086343794198 854.50752993586 71.27 2 -2.0997831813080383 0.4502139707789401 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 121216 11395 VGGPGFGA True PC9_epitope_Rep1 660.32312502552 660.3225749679301 48.71 1 -2.099997136147354 0.4502161227577264 1.0 ['ENST00000526623.2_1_11:64948241-64949272:-|nuORF'] 33923 17555 GMIFFLSHLV True PC9_epitope_Rep3 1162.62088725034 1162.6197899358601 72.711 2 -2.09999927372032 0.4502161227577264 1.0 ['ENST00000372067.7_1_6:43752845-43752986:+|nuORF'] 121036 13201 VGFGLGFQ True PC9_epitope_Rep1 823.42283906679 823.42174993586 55.641 2 -2.1000619068098634 0.4502161227577264 1.0 ['ENST00000472636.5_1_5:56206045-56206902:+|nuORF'] 20158 14784 ENNLQFQIR True PC9_epitope_Rep1 1160.5938205553598 1160.59272993586 61.686 2 -2.1001289282793465 0.4502161227577264 1.0 ['ENSG00000116678|ENST00000349533|LEPR', 'nc|ENSG00000116678|P48357-5|LEPR', 'nc|ENSG00000116678|P48357-2|LEPR', 'nc|ENSG00000116678|P48357-4|LEPR', 'nc|ENSG00000116678|P48357-3|LEPR'] 119042 20966 VEGLRRQSPP True H1975_Epitope_Rep3 1137.6254550368099 1137.6243499358602 87.57 2 -2.1006513892207206 0.4502436757761425 1.0 ['ENSG00000150977|ENST00000280571|RILPL2'] 31628 8035 GEGRGGHM True NCI_RA007_Epitope_Rep2 799.33952044899 799.3389749679301 35.887 1 -2.100779916822309 0.45024961639039573 1.0 ['ENSG00000267221|ENST00000587304|C17orf113'] 57640 19948 LELVPWRAR True NCI_RA007_Epitope_Rep5 1138.66111226954 1138.6600099358602 83.644 2 -2.100929518305575 0.45027660126199326 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'ENSG00000151914|ENST00000680361|DST', 'nc|ENSG00000151914|Q03001|DST', 'nc|ENSG00000151914|Q03001-14|DST', 'nc|ENSG00000151914|Q03001-8|DST', 'nc|ENSG00000127603|O94854|MACF1', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 140196 11871 YVWLMLFQL True PC9_epitope_Rep4 1211.6412883417497 1211.64018993586 53.437 2 -2.1011966059596445 0.45027660126199326 1.0 ['nc|ENSG00000147231|Q6NSI4-2|RADX'] 29848 24945 FVVLIVPM True PC9_epitope_Rep5 916.54559705176 916.54448993586 101.13 2 -2.101220080194488 0.45027660126199326 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 127157 6164 VQELAATHH True PC9_epitope_Rep1 1004.5039429218 1004.50284993586 28.525 2 -2.1016660060446886 0.45027660126199326 1.0 ['SPTA1|p.A1704T|1|0.34|ENSG00000163554|chr1:158638112-158638112|C/T|missense_variant'] 56699 9356 LEAEIAYG True PC9_epitope_Rep2 864.4228986364399 864.42180993586 41.324 2 -2.1019138913867237 0.45027660126199326 1.0 ['LAGE3|p.H79Y|1|0.69|ENSG00000196976|chrX:154478365-154478365|G/A|missense_variant'] 6058 8558 APMPDIQVY True PC9_epitope_Rep4 1032.49501803088 1032.49392993586 40.399 2 -2.1019704032876136 0.45027660126199326 1.0 ['nc|ENSG00000240268|A6NHM9|MOXD2P'] 131665 23674 VWKLSALT True PC9_epitope_Rep6 916.5382031721999 916.53765496793 104.22 1 -2.1020191060726248 0.45027660126199326 1.0 ['ENST00000344423.9_1_8:28205359-28205527:-|nuORF'] 11093 24183 DEDDDHCHNPP True H1975_Epitope_Rep2 1292.43639350744 1292.43528993586 99.553 2 -2.1020976890599945 0.45027660126199326 1.0 ['USP34|p.G630C|1|0.36|ENSG00000115464|chr2:61348267-61348267|C/A|missense_variant'] 54881 15533 LAGKTQTA True NCI_RA007_Epitope_Rep5 788.4392174069199 788.4386649679301 66.448 1 -2.102166865664748 0.45027660126199326 1.0 ['GPR158|p.A1124Lfs*2|1|0.11|ENSG00000151025|chr10:25598987-25598987|C/-|frameshift_variant', 'ENSG00000151025|ENST00000376351|GPR158', 'ENST00000490549.1_1_10:25883203-25888200:+|nuORF'] 23045 12167 EVKPRNKA True PC9_epitope_Rep1 940.54541381096 940.54430993586 51.665 2 -2.1023243472952426 0.45027660126199326 1.0 ['ENST00000487008.1_1_2:238499472-238510157:-|nuORF'] 52389 23908 KPGKMFVLR True PC9_epitope_Rep2 1074.6372060208198 1074.63610993586 97.44 2 -2.1025017146063356 0.45028254081445224 1.0 ['ENSG00000184344|ENST00000329913|GDF3'] 3012 23928 AFQLGLRLGE True H1975_Epitope_Rep1 1102.6134933707797 1102.6123899358602 99.316 2 -2.102788234780382 0.45029170267934315 1.0 ['ENSG00000224940|ENST00000446477|PRRT4', 'nc|ENSG00000224940|C9JH25-3|PRRT4'] 78487 8804 PDEKWILFDGP True H1975_Epitope_Rep3 1315.6448530687098 1315.6437499358601 38.87 2 -2.102794369645533 0.45029170267934315 1.0 ['nc|ENSG00000183914|Q9P225-2|DNAH2', 'ENSG00000183914|ENST00000572933|DNAH2'] 101234 18541 SLWEEFLHL True NCI_RA007_Epitope_Rep5 1172.5866099165999 1172.58550993586 78.144 2 -2.1029543625607774 0.45029170267934315 1.0 ['nc|ENSG00000235865|Q9NRJ2|GSN-AS1'] 54397 15485 KYREGKYRRYH True H1975_Epitope_Rep1 1554.81677804714 1554.81568993586 64.835 2 -2.103111525391994 0.45029170267934315 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF'] 122469 9775 VGSPFKAK True H1975_Epitope_Rep1 832.48068829608 832.47958993586 42.528 2 -2.1033212866796998 0.45029170267934315 1.0 ['nc|ENSG00000136068|O75369-9|FLNB', 'ENSG00000136068|ENST00000295956|FLNB', 'nc|ENSG00000136068|O75369-8|FLNB', 'nc|ENSG00000136068|O75369-3|FLNB', 'nc|ENSG00000136068|O75369-2|FLNB', 'nc|ENSG00000136068|O75369-6|FLNB', 'nc|ENSG00000136068|O75369-7|FLNB', 'ENST00000481470.5_1_3:58118395-58154450:+|nuORF', 'ENST00000484981.1_1_3:58151207-58156486:+|nuORF', 'nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC'] 36382 18026 GVHVKLAH True PC9_epitope_Rep5 859.50282072299 859.50172993586 74.353 2 -2.103408779949824 0.45029170267934315 1.0 ['ENSG00000104879|ENST00000221476|CKM'] 65273 11924 LSEHVVQG True H1975_Epitope_Rep3 867.4450310633499 867.4444849679301 51.018 1 -2.1034304073850394 0.45029170267934315 1.0 ['ENSG00000125772|ENST00000379019|GPCPD1'] 92559 16201 RRAQQETQQVP True PC9_epitope_Rep1 1339.69565985495 1339.69456993586 67.135 2 -2.1035432311242594 0.45029764155529867 1.0 ['ENST00000440760.5_1_2:27594325-27599583:+|nuORF', 'nc|ENSG00000115234|Q15036-2|SNX17', 'ENSG00000115234|ENST00000233575|SNX17', 'ENST00000494893.5_1_2:27594167-27597059:+|nuORF'] 88708 17843 RCRFLLFV True NCI_RA007_Epitope_Rep4 1052.5953412088397 1052.59424993586 77.256 2 -2.1039328460699522 0.4503575981504289 1.0 ['nc|ENSG00000101181|Q9H4K7-2|MTG2', 'ENSG00000101181|ENST00000370823|MTG2'] 60664 21660 LITRNTEKA True PC9_epitope_Rep5 1044.5927579262 1044.5916699358602 88.362 2 -2.1040373106189065 0.45035867075752994 1.0 ['nc|ENSG00000163636|Q15008-3|PSMD6', 'nc|ENSG00000163636|Q15008-2|PSMD6', 'ENST00000476464.5_1_3:63996346-64008248:-|nuORF', 'ENSG00000163636|ENST00000295901|PSMD6', 'nc|ENSG00000163636|Q15008-4|PSMD6', 'ENST00000497315.5_1_3:64004227-64005057:-|nuORF'] 80192 27072 PLAFDPTS True PC9_epitope_Rep2 846.41233395274 846.41122993586 111.54 2 -2.1040449283262586 0.45035867075752994 1.0 ['nc|ENSG00000196498|Q9Y618-4|NCOR2', 'ENSG00000196498|ENST00000405201|NCOR2', 'NCOR2|p.L666Ffs*38|1|0.12|ENSG00000196498|chr12:124385769-124385769|G/AA|frameshift_variant', 'nc|ENSG00000196498|Q9Y618-5|NCOR2'] 34328 23811 GPRMAFFSI True H1975_Epitope_Rep1 1024.5164221817997 1024.51532993586 98.838 2 -2.104085136623056 0.4503705464209321 1.0 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2'] 79200 3430 PGFEGPRC True PC9_epitope_Rep6 861.3803226318099 861.3792299358599 19.364 2 -2.1041507140766527 0.4503705464209321 1.0 ['ENSG00000204301|ENST00000375023|NOTCH4', 'NOTCH4|p.E589K|1|0.07|ENSG00000204301|chr6:32217041-32217041|C/T|missense_variant'] 92162 22757 RQEGKKHILV True PC9_epitope_Rep4 1206.71968977482 1206.71858993586 95.754 2 -2.1042485829182116 0.4503716187019272 1.0 ['ENSG00000124006|ENST00000404537|OBSL1', 'ENST00000489804.5_1_2:220415549-220417393:-|nuORF', 'ENST00000465149.1_1_2:220416245-220417504:-|nuORF'] 10382 22214 CKNHGIFF True H1975_Epitope_Rep3 964.4589073056799 964.45780993586 92.899 2 -2.104420002676901 0.4503716187019272 1.0 ['UBE2G2|p.G164Dfs*60|1|0.42|ENSG00000184787|chr21:44771384-44771384|C/-|frameshift_variant'] 135085 23143 YALPAVQQ True PC9_epitope_Rep5 888.4705175352001 888.46942993586 94.008 2 -2.10468142420137 0.45037269093658855 1.0 ['ENST00000216190.12_1_22:36921721-36925191:-|nuORF'] 79431 6825 PGPHGPNG True NCI_RA007_Epitope_Rep4 731.33508669155 731.33453496793 32.874 1 -2.1047621020746554 0.45037269093658855 1.0 ['ENSG00000204262|ENST00000374866|COL5A2'] 119593 22997 VERREKKSLRW True PC9_epitope_Rep5 1485.85282920269 1485.85172993586 93.449 2 -2.105353106024715 0.45038456552737327 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 112758 21158 TPKQASAT True PC9_epitope_Rep4 802.4184819623399 802.41738993586 89.546 2 -2.105386247151773 0.45038456552737327 1.0 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 111117 8273 TLELGDRTA True PC9_epitope_Rep4 974.5032742154599 974.50216993586 39.284 2 -2.1055646731208735 0.4503964396050727 1.0 ['nc|ENSG00000133401|O15018-2|PDZD2', 'ENSG00000133401|ENST00000438447|PDZD2', 'ENST00000502489.5_1_5:31983264-32077762:+|nuORF'] 41230 19076 IAEARGRVP True PC9_epitope_Rep2 967.5563128478299 967.55520993586 78.741 2 -2.1057287175008597 0.4503964396050727 1.0 ['ENST00000296127.7_1_3:45000927-45017663:-|nuORF', 'ENST00000455235.5_3_3:44986732-45017663:-|nuORF'] 99045 14873 SKTSGKAK True NCI_RA007_Epitope_Rep3 805.4657665079299 805.46466993586 65.935 2 -2.1057898205802217 0.4504023764515258 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 130991 5371 VVLAKANS True NCI_RA007_Epitope_Rep3 800.47560291564 800.4745099358599 28.134 2 -2.105894116842646 0.45040831316972 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB'] 81598 16176 PRLTVSFSL True PC9_epitope_Rep6 1018.58113061334 1018.58002993586 74.577 2 -2.106284221973361 0.4504093845190002 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.G2269Afs*6|1|0.24|ENSG00000158683|chr7:47827398-47827398|C/-|frameshift_variant'] 133607 22964 WIPFIYRGVRV True PC9_epitope_Rep4 1404.80302547596 1404.80137490379 96.55 3 -2.1064291092689227 0.4504093845190002 1.0 ['ENSG00000104356|ENST00000401707|POP1'] 91894 8244 RPPHPWRTV True PC9_epitope_Rep1 1144.62539546716 1144.62373490379 36.544 3 -2.106618014583269 0.4504104558219918 1.0 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5'] 47100 20940 IVVSGVERA True PC9_epitope_Rep1 928.5341804209199 928.53308993586 85.366 2 -2.1067238257363776 0.4504104558219918 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 115938 14917 TVPPGPGH True NCI_RA007_Epitope_Rep4 760.3867879112399 760.38623496793 64.841 1 -2.1071562202237084 0.4504271934846243 1.0 ['ADGRB2|p.C1012Sfs*79|1|0.17|ENSG00000121753|chr1:31736668-31736668|C/-|frameshift_variant', 'nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2'] 54588 5917 LADDHLIEV True H1975_Epitope_Rep3 1023.52367530687 1023.5225699358599 27.768 2 -2.107932696030787 0.45048333963384996 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000215859|A8MUH7-2|PDZK1P1', 'nc|ENSG00000215859|A8MUH7|PDZK1P1'] 20128 5137 ENLIYTYD True PC9_epitope_Rep1 1029.46549172441 1029.46438993586 24.611 2 -2.10797672721064 0.45048333963384996 1.0 ['ENSG00000135966|ENST00000393359|TGFBRAP1'] 16970 13132 EGHGEGWE True NCI_RA007_Epitope_Rep3 899.3409599176299 899.33986993586 58.931 2 -2.1079910844619145 0.45048333963384996 1.0 ['ENST00000398117.1_1_18:60794470-60795067:-|nuORF'] 102983 19384 SQISAKEQIIL True NCI_RA007_Epitope_Rep5 1228.7027022979998 1228.70160993586 81.447 2 -2.1080254411518577 0.45048333963384996 1.0 ['nc|ENSG00000157654|Q9Y2D5-6|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-9|PALM2AKAP2', 'nc|ENSG00000157654|Q9Y2D5-8|PALM2AKAP2'] 10423 24437 CLSPRQKELQ True NCI_RA007_Epitope_Rep5 1200.62849181192 1200.62683490379 101.47 3 -2.10810536797067 0.45048927483636836 1.0 ['ENSG00000117477|ENST00000367806|CCDC181', 'nc|ENSG00000117477|Q5TID7-3|CCDC181', 'nc|ENSG00000117477|Q5TID7-2|CCDC181'] 6814 18399 AQGNGHCV True NCI_RA007_Epitope_Rep5 784.32862141212 784.3280749679301 77.581 1 -2.108490101840393 0.450506010563038 1.0 ['nc|ENSG00000033327|Q9UQC2-2|GAB2', 'ENSG00000033327|ENST00000361507|GAB2'] 128282 24979 VSARIVTA True PC9_epitope_Rep3 815.4865019525099 815.4859549679301 101.43 1 -2.1087043788544366 0.45051194539249145 1.0 ['ENST00000471887.1_1_7:18557286-18557502:+|nuORF'] 36002 13986 GVCYRMLFYF True PC9_epitope_Rep4 1297.5987719067696 1297.59766993586 61.703 2 -2.1091078409515225 0.4505162210030671 1.0 ['LTR1_dup85|chr7:101629186-101629993:-|1.961039395768969|0.0003248618387484|12.56|495.0|35|3|anti-sense'] 121372 21084 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 91.416 2 -2.109157751862576 0.4505162210030671 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 127431 22188 VQRSQRRAP True PC9_epitope_Rep4 1096.62137271588 1096.62077496793 93.592 1 -2.1092156966181257 0.4505162210030671 1.0 ['ENSG00000182173|ENST00000333213|TSEN54'] 113464 5489 TQRDLRHN True NCI_RA007_Epitope_Rep3 1038.5318890051399 1038.5307899358602 28.595 2 -2.1094105869048656 0.4505162210030671 1.0 ['ENSG00000139629|ENST00000356317|GALNT6', 'ENST00000603680.5_1_12:51748165-51753149:-|nuORF'] 80067 17341 PKGKRSLN True H1975_Epitope_Rep1 898.5348491272599 898.53374993586 72.168 2 -2.1094788841324 0.4505162210030671 1.0 ['NPVF|p.E54K|2|0.22|ENSG00000105954|chr7:25227005-25227005|C/T|missense_variant'] 140379 13737 YYELWWFWLLW True NCI_RA007_Epitope_Rep1 1703.8176724805896 1703.81602490379 57.45 3 -2.109543091046718 0.4505162210030671 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 121376 20479 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 85.718 2 -2.1095896599252546 0.4505162210030671 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 124990 26038 VLNQEVRKHLK True H1975_Epitope_Rep1 1362.80956740838 1362.80791490379 108.08 3 -2.109639566125385 0.4505162210030671 1.0 ['nc|ENSG00000075275|Q9NYQ6|CELSR1', 'ENSG00000075275|ENST00000674500|CELSR1'] 118892 19550 VEEPLSRGL True PC9_epitope_Rep1 998.53965972418 998.53856993586 80.024 2 -2.1102974806125285 0.4505194272261938 1.0 ['ENST00000358595.9_2_1:150825241-150830924:-|nuORF'] 79452 7950 PGPLSKQGS True PC9_epitope_Rep2 869.46068112749 869.46013496793 35.944 1 -2.110386006652133 0.4505194272261938 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 21042 20353 ERDFNAPSL True PC9_epitope_Rep1 1047.49852318819 1047.49742993586 83.118 2 -2.1104518590539643 0.4505194272261938 1.0 ['FIZ1|p.A241S|1|0.24|ENSG00000179943|chr19:55593220-55593220|C/A|missense_variant'] 52561 23354 KPTKAARQ True PC9_epitope_Rep1 898.5348491272598 898.53374993586 94.617 2 -2.1108264819242377 0.4505194272261938 1.0 ['ENSG00000183921|ENST00000602312|SDR42E2'] 72880 18081 NATKTKLKQ True NCI_RA007_Epitope_Rep4 1030.61349337078 1030.6123899358602 78.239 2 -2.110827482965407 0.4505194272261938 1.0 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'SMARCAD1|p.N347Kfs*4|1|0.46|ENSG00000163104|chr4:94252758-94252759|-/A|frameshift_variant'] 30168 4956 FYTDFMGEVV True NCI_RA007_Epitope_Rep1 1206.52671208198 1206.52507490379 23.361 3 -2.1109521923809287 0.4505194272261938 1.0 ['ENST00000497660.5_1_1:8390216-8404070:+|nuORF', 'ENSG00000162426|ENST00000471889|SLC45A1'] 20195 8276 ENSLTETHK True PC9_epitope_Rep1 1057.50400249145 1057.50290993586 36.667 2 -2.1111955336470345 0.45053829624110486 1.0 ['ENSG00000155816|ENST00000319653|FMN2', 'nc|ENSG00000155816|Q9NZ56-2|FMN2'] 35848 11252 GVAAKGKH True NCI_RA007_Epitope_Rep1 766.4449714937 766.4444249679301 47.764 1 -2.1114031326371485 0.45053829624110486 1.0 ['ENSG00000119138|ENST00000377126|KLF9'] 129231 24763 VTDLRIRLLRP True NCI_RA007_Epitope_Rep5 1350.8459529170998 1350.84484993586 102.74 2 -2.1114834219503167 0.45053829624110486 1.0 ['ENST00000477948.1_1_1:107866915-107871621:+|nuORF', 'nc|ENSG00000162631|Q9Y2I2-2|NTNG1', 'ENST00000294649.8_1_1:107691215-107950335:+|nuORF', 'nc|ENSG00000162631|Q9Y2I2-1|NTNG1', 'nc|ENSG00000162631|Q9Y2I2-5|NTNG1', 'nc|ENSG00000162631|Q9Y2I2-4|NTNG1', 'nc|ENSG00000162631|Q9Y2I2-6|NTNG1', 'ENSG00000162631|ENST00000370068|NTNG1'] 53128 21956 KSKAYTVV True PC9_epitope_Rep5 894.5174677276199 894.51636993586 89.489 2 -2.1114914202963204 0.45053829624110486 1.0 ['ENSG00000160602|ENST00000268766|NEK8'] 65397 10543 LSERVVVKY True NCI_RA007_Epitope_Rep1 1091.6338944621898 1091.63278993586 44.994 2 -2.1116001094941677 0.45053829624110486 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant', 'HMCN1|p.E3102Vfs*9|1|0.2|ENSG00000143341|chr1:186087585-186087586|AG/-|frameshift_variant', 'HMCN1|p.G1946Efs*22|1|0.29|ENSG00000143341|chr1:186038020-186038020|G/-|frameshift_variant', 'HMCN1-IGLL5|1|fusion'] 126730 9500 VPRSVAHI True NCI_RA007_Epitope_Rep5 877.5133854066898 877.5122899358599 43.175 2 -2.1116452139922584 0.45054422944022116 1.0 ['ENST00000498657.1_1_11:29747911-29748109:+|nuORF'] 109396 21508 TGPHCPLP True H1975_Epitope_Rep2 820.39015903952 820.38906993586 88.988 2 -2.1117998418085175 0.450545297484073 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 49346 4323 KIETEHGT True PC9_epitope_Rep2 913.45051036661 913.44940993586 21.968 2 -2.1118026575932882 0.450545297484073 1.0 ['ENST00000496790.1_1_7:102389906-102395456:+|nuORF', 'ENSG00000222011|ENST00000413034|FAM185A'] 112262 6431 TLYQVEKEMEE True NCI_RA007_Epitope_Rep1 1397.6384473589299 1397.6373499358601 29.039 2 -2.1120341318357783 0.4505474334333902 1.0 ['nc|ENSG00000089177|Q96L93-2|KIF16B', 'KIF16B|p.K989Rfs*51|1|0.15|ENSG00000089177|chr20:16379036-16379036|T/-|frameshift_variant', 'nc|ENSG00000089177|Q96L93-5|KIF16B', 'nc|ENSG00000089177|Q96L93-6|KIF16B', 'nc|ENSG00000089177|Q96L93-4|KIF16B', 'ENSG00000089177|ENST00000354981|KIF16B'] 77900 8580 PAHALAFQ True PC9_epitope_Rep5 853.44463714053 853.44354993586 37.944 2 -2.112248867440904 0.4505474334333902 1.0 ['ENSG00000184863|ENST00000401878|RBM33', 'RBM33-CDK14|1|fusion'] 30666 9971 GALHTPPI True H1975_Epitope_Rep1 804.4493881678 804.44828993586 43.29 2 -2.112385459962662 0.4505474334333902 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 94104 22079 RWDLEDEEFQD True PC9_epitope_Rep4 1480.6106523879596 1480.60954993586 93.142 2 -2.1124058030839126 0.4505474334333902 1.0 ['nc|ENSG00000145949|Q86YV6-2|MYLK4', 'ENSG00000145949|ENST00000274643|MYLK4'] 60916 18786 LKVRYRER True NCI_RA007_Epitope_Rep3 1118.6672602791398 1118.6661699358601 82.158 2 -2.112541079878015 0.45054850133886154 1.0 ['ENSG00000113575|ENST00000481195|PPP2CA', 'nc|ENSG00000113575|P67775-2|PPP2CA'] 78526 20907 PDLEPSPQP True PC9_epitope_Rep1 978.46582607758 978.46472993586 85.239 2 -2.112585497417578 0.45054850133886154 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000471834.1_1_6:152657861-152688565:-|nuORF', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 49290 24387 KHLQKQEGA True PC9_epitope_Rep2 1037.5617921510898 1037.5606899358602 99.371 2 -2.1128693243197527 0.450549569198212 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.Q2344Kfs*48|2|0.43|ENSG00000091656|chr8:76853949-76853949|C/-|frameshift_variant', 'ZFHX4|p.P2910Qfs*27|1|0.24|ENSG00000091656|chr8:76855647-76855647|C/-|frameshift_variant', 'ZFHX4|p.A2982Qfs*10|1|0.33|ENSG00000091656|chr8:76855863-76855863|G/-|frameshift_variant', 'ZFHX4|p.N1257Kfs*31|1|0.25|ENSG00000091656|chr8:76849634-76849635|-/A|frameshift_variant', 'ZFHX4|p.K1442Nfs*10|1|0.42|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant'] 6386 4964 APRTQPDLIL True PC9_epitope_Rep1 1122.6397081186199 1122.63805490379 23.953 3 -2.112916422697683 0.450549569198212 1.0 ['nc|ENSG00000171671|Q9BTD1|SHANK2-AS3'] 132030 23554 VYGYLLHT True NCI_RA007_Epitope_Rep3 964.50181766348 964.50072993586 102.19 2 -2.113320841936136 0.45055324661305124 1.0 ['nc|ENSG00000240268|A6NHM9|MOXD2P'] 56089 15914 LDLIYGIFTT True NCI_RA007_Epitope_Rep3 1154.6223267189798 1154.6212299358601 70.256 2 -2.113332545034911 0.45055324661305124 1.0 ['ENSG00000112902|ENST00000382496|SEMA5A', 'SEMA5A|p.Q524Sfs*181|1|0.21|ENSG00000112902|chr5:9136534-9136534|C/-|frameshift_variant', 'SEMA5A|p.G636Dfs*69|1|0.16|ENSG00000112902|chr5:9119016-9119016|C/-|frameshift_variant'] 23502 18135 EWEQALGG True NCI_RA007_Epitope_Rep3 888.3977465177597 888.39664993586 79.455 2 -2.11334522698151 0.45055324661305124 1.0 ['nc|ENSG00000288550|Q8NAC3-4|IL17RC', 'ENST00000483582.5_1_3:9958999-9974679:+|nuORF'] 28350 18788 FSDFLFAF True NCI_RA007_Epitope_Rep5 992.4643695255999 992.46326993586 79.105 2 -2.113593695523358 0.45055324661305124 1.0 ['nc|ENSG00000149179|Q9H6J7-4|CSTPP1', 'ENST00000529980.5_1_11:47159254-47177376:+|nuORF', 'ENST00000527234.5_1_11:46958304-47179413:+|nuORF', 'nc|ENSG00000149179|Q9H6J7-3|CSTPP1', 'ENST00000525895.5_1_11:46958334-47183186:+|nuORF', 'ENSG00000149179|ENST00000278460|CSTPP1', 'nc|ENSG00000149179|Q9H6J7-2|CSTPP1'] 123044 24824 VGYPNVGK True PC9_epitope_Rep5 832.4443027873599 832.4437549679301 100.64 1 -2.113864113645734 0.45055324661305124 1.0 ['ENSG00000041802|ENST00000265245|LSG1', 'ENST00000466391.1_1_3:194371468-194371945:-|nuORF'] 62178 24596 LLPKKPTA True PC9_epitope_Rep4 866.5589386167799 866.55784993586 103.1 2 -2.1138944787366043 0.45055324661305124 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 106187 6903 SVPGSLCVSRA True PC9_epitope_Rep4 1074.54917886206 1074.5480899358602 33.777 2 -2.113945885886711 0.45055324661305124 1.0 ['ENST00000341735.3_1_15:90319632-90321465:+|nuORF'] 126482 23878 VPMLPRKF True H1975_Epitope_Rep2 986.5735431351 986.57244993586 98.357 2 -2.1140617724876463 0.45055324661305124 1.0 ['IRS4|p.G834R|1|0.57|ENSG00000133124|chrX:108733845-108733845|C/T|missense_variant'] 90493 25582 RKAFKRAT True PC9_epitope_Rep2 976.5930327097199 976.5924849679301 104.09 1 -2.1141123572093825 0.45055324661305124 1.0 ['ZNF236|p.C1724Wfs*46|1|0.31|ENSG00000130856|chr18:76959752-76959752|T/-|frameshift_variant', 'nc|ENSG00000130856|Q9UL36|ZNF236', 'ENSG00000130856|ENST00000320610|ZNF236', 'ENST00000543926.6_1_18:74647944-74680292:+|nuORF'] 22414 21238 ETFDELHIE True H1975_Epitope_Rep2 1131.5084191655499 1131.50677490379 87.898 3 -2.1143265787811614 0.45055324661305124 1.0 ['ENSG00000176771|ENST00000409261|NCKAP5'] 79460 8452 PGPLSKQGS True PC9_epitope_Rep5 869.46068112749 869.45958993586 37.453 2 -2.114623460938811 0.45055324661305124 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 60679 12189 LIVGVKKG True H1975_Epitope_Rep2 812.5483739330799 812.54726993586 51.966 2 -2.1146776152934597 0.45055324661305124 1.0 ['ENSG00000162040|ENST00000454677|HS3ST6', 'ENSG00000122254|ENST00000261374|HS3ST2'] 37705 22709 HAPALHLT True PC9_epitope_Rep6 858.4711862415401 858.47008993586 100.42 2 -2.1146864656714968 0.45055324661305124 1.0 ['ENST00000308406.9_1_17:19284741-19284873:+|nuORF'] 40753 5100 HTYSFQCK True PC9_epitope_Rep3 1012.44365116436 1012.44254993586 24.701 2 -2.1147975052145824 0.45055324661305124 1.0 ['nc|ENSG00000196104|Q9BQ16-9|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-7|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-2|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-6|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-4|SPOCK3', 'nc|ENSG00000196104|Q9BQ16-8|SPOCK3', 'ENSG00000196104|ENST00000357545|SPOCK3', 'nc|ENSG00000196104|Q9BQ16|SPOCK3'] 133906 23377 WNGKLLKI True NCI_RA007_Epitope_Rep4 970.5963867546599 970.59528993586 101.49 2 -2.114827452583683 0.45055324661305124 1.0 ['ENSG00000113369|ENST00000265138|ARRDC3'] 35896 22715 GVAGHRKA True PC9_epitope_Rep2 794.4511195032999 794.45057496793 92.869 1 -2.1148671647400596 0.45055324661305124 1.0 ['nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1', 'ENSG00000130559|ENST00000389532|CAMSAP1', 'nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1', 'ENST00000483991.5_1_9:138703157-138717996:-|nuORF'] 9707 21243 AYILEGKK True H1975_Epitope_Rep1 920.5331177917599 920.53202993586 88.257 2 -2.1153302747189606 0.45055324661305124 1.0 ['ENSG00000158863|ENST00000289921|FHIP2B'] 47870 9954 IYTSEPSAQ True PC9_epitope_Rep2 994.46074069714 994.4596499358599 43.619 2 -2.1154805748647996 0.45057590379653917 1.0 ['ENST00000366472.5_1_1:249120450-249120786:-|nuORF'] 121360 15498 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 68.52 2 -2.1156224148262748 0.45057590379653917 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 11467 4807 DFYYREEFIYW True NCI_RA007_Epitope_Rep2 1629.7139952576897 1629.7123349037902 23.325 3 -2.115918374403922 0.45059262937455474 1.0 ['LRP1B|p.D3051Y|1|0.26|ENSG00000168702|chr2:140487709-140487709|C/A|missense_variant'] 82393 704 PVAALKAK True NCI_RA007_Epitope_Rep1 796.5170738048 796.51596993586 3.7387 2 -2.1161274844838815 0.4505936960276338 1.0 ['ENSG00000182095|ENST00000430969|TNRC18', 'nc|ENSG00000182095|O15417-2|TNRC18', 'TNRC18|p.R1484Gfs*19|1|0.23|ENSG00000182095|chr7:5361979-5361979|G/-|frameshift_variant'] 51832 24961 KKKQRPQKI True NCI_RA007_Epitope_Rep5 1152.74551059984 1152.7438649037902 103.51 3 -2.1162621250887046 0.4505936960276338 1.0 ['ENSG00000171914|ENST00000636159|TLN2', 'TLN2|p.S2316Lfs*6|1|0.6|ENSG00000171914|chr15:62820553-62820562|ATCCATCGAA/-|frameshift_variant', 'TLN2|p.G145Afs*19|1|0.41|ENSG00000171914|chr15:62653229-62653229|G/-|frameshift_variant'] 75015 19137 NMAGGLRL True NCI_RA007_Epitope_Rep5 830.44325724154 830.44214993586 80.482 2 -2.1165261509324527 0.4505952316708579 1.0 ['ENST00000336279.9_1_X:65384222-65384267:+|nuORF'] 42254 7798 IEHNKQVEP True PC9_epitope_Rep3 1092.55637241748 1092.55526993586 34.988 2 -2.1165664490451688 0.4505952316708579 1.0 ['POLR3A|p.E206Q|2|0.25|ENSG00000148606|chr10:78024578-78024578|C/G|missense_variant'] 79866 22950 PIIWLYEKLA True PC9_epitope_Rep6 1244.71689581016 1244.7157899358601 101.37 2 -2.1166760212959357 0.4505952316708579 1.0 ['ENST00000480929.1_1_2:219612227-219612548:+|nuORF'] 140025 23871 YVLLALNK True NCI_RA007_Epitope_Rep3 932.5695033004799 932.56895496793 103.43 1 -2.1168013162523596 0.4505952316708579 1.0 ['ENST00000591247.5_1_17:42113389-42113530:-|nuORF'] 60801 23718 LKIELYKKTK True NCI_RA007_Epitope_Rep3 1262.7962087600197 1262.7951099358602 102.82 2 -2.1171318319052133 0.4505952316708579 1.0 ['nc|ENSG00000138336|Q8NFU7-4|TET1'] 76662 25378 NTIQSIIAIIR True PC9_epitope_Rep5 1240.7503211967598 1240.74922993586 102.84 2 -2.117157793396289 0.4505952316708579 1.0 ['ENSG00000127955|ENST00000649796|GNAI1', 'nc|ENSG00000127955|P63096-2|GNAI1', 'ENSG00000065135|ENST00000369851|GNAI3'] 39098 1076 HLASWKAG True NCI_RA007_Epitope_Rep1 868.4555361774 868.45442993586 5.6904 2 -2.1172108055831163 0.4505952316708579 1.0 ['ZNF22|p.P209A|1|0.96|ENSG00000165512|chr10:45003993-45003993|C/G|missense_variant'] 39418 26467 HMAPEIRELLT True H1975_Epitope_Rep3 1308.68600668804 1308.68437490379 110.47 3 -2.1172194547107543 0.4505952316708579 1.0 ['PWWP2B|p.V577M|1|0.05|ENSG00000171813|chr10:132406229-132406229|G/A|missense_variant'] 101477 16748 SNQFVPFN True NCI_RA007_Epitope_Rep4 951.4450310633499 951.44392993586 72.604 2 -2.117253128304 0.4505952316708579 1.0 ['ENSG00000106546|ENST00000242057|AHR'] 11058 20314 DDQRCPLD True NCI_RA007_Epitope_Rep5 960.3970948947599 960.39598993586 85.076 2 -2.117414995579691 0.4505952316708579 1.0 ['nc|ENSG00000160360|Q86YR5-4|GPSM1', 'nc|ENSG00000160360|Q86YR5|GPSM1', 'ENSG00000160360|ENST00000440944|GPSM1', 'nc|ENSG00000160360|Q86YR5-2|GPSM1'] 111969 16975 TLSFVEKHC True PC9_epitope_Rep4 1062.51681610462 1062.51570993586 73.284 2 -2.1176629396240165 0.4505952316708579 1.0 ['ENST00000429519.5_1_4:74980082-74980279:+|nuORF'] 57714 8514 LENIQRDY True H1975_Epitope_Rep1 1049.51417325233 1049.5130699358601 37.679 2 -2.117669822368983 0.4505952316708579 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 60836 14652 LKKTRKEA True NCI_RA007_Epitope_Rep5 972.6080140675199 972.60690993586 63.027 2 -2.117728533268415 0.4505952316708579 1.0 ['ENST00000397412.7_1_16:1727111-1727186:+|nuORF'] 79995 19120 PKARLLRNSFR True NCI_RA007_Epitope_Rep4 1356.81023611472 1356.80912993586 82.691 2 -2.117974689928243 0.4506070908207868 1.0 ['ENSG00000113971|ENST00000337331|NPHP3', 'nc|ENSG00000113971|Q7Z494-3|NPHP3', 'nc|ENSG00000113971|Q7Z494-6|NPHP3', 'nc|ENSG00000113971|Q7Z494-5|NPHP3', 'nc|ENSG00000113971|Q7Z494-7|NPHP3', 'nc|ENSG00000113971|Q7Z494-4|NPHP3'] 59857 18227 LHGASGQQ True NCI_RA007_Epitope_Rep3 796.3827651599602 796.38166993586 79.811 2 -2.1180111013868825 0.4506070908207868 1.0 ['ENSG00000101407|ENST00000373447|TTI1'] 244 18762 AAGEIKMP True H1975_Epitope_Rep1 815.4211248146299 815.4205749679301 78.231 1 -2.1184956712725462 0.4506130202037645 1.0 ['SVIL|p.T1111M|1|0.07|ENSG00000197321|chr10:29522467-29522467|G/A|missense_variant'] 73624 23766 NGGPKAAKKKK True NCI_RA007_Epitope_Rep3 1125.6982260542497 1125.6971299358602 103.01 2 -2.1186844367875386 0.4506297419514985 1.0 ['ENST00000532854.1_10:47241805-47241907:-|nuORF'] 109424 12274 TGRGGGGA True PC9_epitope_Rep3 631.3037865632699 631.30323496793 52.238 1 -2.1194982268930995 0.4507112175958903 1.0 ['ENST00000528220.1_1_11:65487749-65488268:-|nuORF', 'ENST00000308418.8_1_11:65487749-65488293:-|nuORF'] 79184 17931 PGEIVSLGIL True H1975_Epitope_Rep1 996.5855472874399 996.58444993586 74.688 2 -2.1198732897088672 0.4507279379229217 1.0 ['ENSG00000138400|ENST00000374412|MDH1B', 'nc|ENSG00000138400|Q5I0G3-2|MDH1B', 'nc|ENSG00000138400|Q5I0G3-3|MDH1B'] 29680 11129 FVNDSLQQV True H1975_Epitope_Rep3 1048.5189242796 1048.5178299358602 47.903 2 -2.1199526014655214 0.4507338657457371 1.0 ['ENSG00000177103|ENST00000651296|DSCAML1', 'DSCAML1|p.A1642Rfs*2|1|0.38|ENSG00000177103|chr11:117435773-117435777|GAGCA/-|frameshift_variant'] 121471 9969 VGKAAATG True H1975_Epitope_Rep3 673.3758888743699 673.37534496793 43.38 1 -2.1202050920302113 0.45075651291791674 1.0 ['nc|ENSG00000288674|P49810-2|PSEN2', 'nc|ENSG00000288674|P49810-3|PSEN2', 'ENSG00000143801|ENST00000366783|PSEN2'] 110774 24839 TKLLRWVKKEE True PC9_epitope_Rep2 1428.8452842107602 1428.8441899358602 101.23 2 -2.1202529222720834 0.45075651291791674 1.0 ['nc|ENSG00000103111|Q7L1V2-2|MON1B', 'ENST00000566455.1_1_16:77227993-77232202:+|nuORF', 'MON1B|p.L351Hfs*4|1|0.15|ENSG00000103111|chr16:77194909-77194920|GCTGCTGCTTGG/T|frameshift_variant', 'ENSG00000103111|ENST00000248248|MON1B'] 80488 11316 PLLGHDAV True PC9_epitope_Rep2 820.4443027873599 820.44320993586 48.85 2 -2.1210042669130065 0.4507656282036064 1.0 ['nc|ENSG00000118200|Q08AD1|CAMSAP2', 'CAMSAP2-CARS|1|fusion', 'nc|ENSG00000118200|Q08AD1-2|CAMSAP2', 'ENSG00000118200|ENST00000358823|CAMSAP2'] 130642 5891 VVAPPVPC True NCI_RA007_Epitope_Rep4 780.42039653864 780.41928993586 29.282 2 -2.121061240353779 0.4507656282036064 1.0 ['ENSG00000122574|ENST00000242140|WIPF3'] 7296 26601 ARPVPKHIR True PC9_epitope_Rep5 1072.66178097588 1072.66068993586 108.39 2 -2.121479193386265 0.4507656282036064 1.0 ['ENST00000299353.6_1_10:104622682-104660454:+|nuORF', 'ENSG00000214435|ENST00000369880|AS3MT', 'nc|ENSG00000214435|Q9HBK9-2|AS3MT'] 51971 19853 KKYINQEVL True PC9_epitope_Rep6 1133.6444591458899 1133.6433699358602 89.023 2 -2.121564544743857 0.4507656282036064 1.0 ['ENSG00000082293|ENST00000620364|COL19A1'] 70677 3396 MDHLCKAA True PC9_epitope_Rep3 887.39934382423 887.39824993586 18.19 2 -2.1217167354829227 0.4507656282036064 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF'] 111303 3144 TLHMMYHE True H1975_Epitope_Rep1 1060.44702229264 1060.44592993586 15.997 2 -2.1217994072079227 0.4507656282036064 1.0 ['nc|ENSG00000115464|Q70CQ2-2|USP34', 'ENSG00000115464|ENST00000398571|USP34', 'USP34|p.Q3273Vfs*2|1|0.27|ENSG00000115464|chr2:61190326-61190327|TG/-|frameshift_variant', 'USP34|p.I3313Ffs*8|1|0.31|ENSG00000115464|chr2:61189006-61189006|T/-|frameshift_variant'] 97551 18298 SGVGKWGP True H1975_Epitope_Rep3 786.4024379753798 786.40134993586 76.689 2 -2.1220059694244813 0.4507656282036064 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 32525 17517 GGRFGRKG True NCI_RA007_Epitope_Rep4 833.4620185401699 833.46092993586 75.827 2 -2.1226174826326853 0.4507931369375202 1.0 ['nc|ENSG00000156976|Q14240-2|EIF4A2', 'ENSG00000156976|ENST00000323963|EIF4A2', 'EIF4A2|p.E379Rfs*7|1|0.13|ENSG00000156976|chr3:186789179-186789183|TGAAG/-|frameshift_variant', 'ENSG00000161960|ENST00000293831|EIF4A1', 'ENST00000581621.1_1_17:7481648-7481801:+|nuORF'] 10241 6702 CFIYLSKPGQW True PC9_epitope_Rep4 1340.6587293110397 1340.65762993586 32.964 2 -2.1227768131933193 0.45079906335315256 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 102622 21705 SQCAPNIHK True PC9_epitope_Rep4 996.4810993022401 996.48000993586 91.692 2 -2.123013267844744 0.450804989640884 1.0 ['nc|ENSG00000008277|Q9P0K1-5|ADAM22', 'nc|ENSG00000008277|Q9P0K1-2|ADAM22', 'nc|ENSG00000008277|Q9P0K1|ADAM22', 'ENSG00000008277|ENST00000413139|ADAM22', 'ADAM22|p.G744Afs*4|1|0.28|ENSG00000008277|chr7:88168175-88168175|G/-|frameshift_variant', 'nc|ENSG00000008277|Q9P0K1-4|ADAM22', 'nc|ENSG00000008277|Q9P0K1-3|ADAM22', 'ADAM22|p.L807Sfs*88|1|0.24|ENSG00000008277|chr7:88181512-88181512|G/-|frameshift_variant'] 109317 11306 TGGGGGGD True NCI_RA007_Epitope_Rep4 576.21396849936 576.2134249679301 50.384 1 -2.123291467229815 0.4508217064301361 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 69781 10888 LWRFRYQVWPR True NCI_RA007_Epitope_Rep2 1605.8680853440098 1605.8664449037901 46.957 3 -2.1238383060865633 0.4508335581332614 1.0 ['nc|ENSG00000144406|Q8N2C7|UNC80', 'ENSG00000144406|ENST00000673920|UNC80', 'nc|ENSG00000144406|Q8N2C7-2|UNC80', 'nc|ENSG00000144406|Q8N2C7-4|UNC80', 'nc|ENSG00000144406|Q8N2C7-7|UNC80', 'ENST00000489023.5_1_2:210693994-210832362:+|nuORF'] 95420 22273 SAKKPCPV True PC9_epitope_Rep6 828.4527592960799 828.45166993586 98.643 2 -2.1242928311233906 0.4508335581332614 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 52100 23245 KLNLSLHKKT True PC9_epitope_Rep6 1180.72919182936 1180.72808993586 102.51 2 -2.125013684724047 0.450852833608441 1.0 ['ENSG00000141946|ENST00000269834|ZIM3'] 121831 15112 VGNLASGK True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 64.796 1 -2.125063212346184 0.450852833608441 1.0 ['AGAP1-DIS3L2|1|fusion', 'AGAP1|p.A337Gfs*13|1|0.1|ENSG00000157985|chr2:235807289-235807290|-/G|frameshift_variant', 'nc|ENSG00000157985|Q9UPQ3-3|AGAP1', 'nc|ENSG00000157985|Q9UPQ3-2|AGAP1', 'ENSG00000157985|ENST00000304032|AGAP1', 'AGAP1|p.K197Nfs*6|1|0.26|ENSG00000157985|chr2:235750406-235750406|G/-|frameshift_variant'] 86552 24567 QRAPKPLPRV True PC9_epitope_Rep6 1160.71421047156 1160.71310993586 108.82 2 -2.1250723632726056 0.450852833608441 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 32161 23070 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 95.985 2 -2.1251982937918936 0.450852833608441 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 25114 22929 FDLLFWKRW True PC9_epitope_Rep2 1309.69716342509 1309.6960699358601 93.703 2 -2.1252767372848984 0.450852833608441 1.0 ['ENST00000368134.6_1_6:130537757-130543915:-|nuORF'] 10401 15798 CLFFFFFRFR True PC9_epitope_Rep4 1428.7165189706795 1428.7154299358601 68.692 2 -2.125339694360373 0.450852833608441 1.0 ['ENST00000554233.1_1_14:76524934-76525784:+|nuORF'] 3539 7040 AGLYFLMWF True PC9_epitope_Rep3 1146.55722436462 1146.55558490379 32.09 3 -2.1253438906320854 0.450852833608441 1.0 ['ENST00000411991.5_1_2:103340290-103347510:-|nuORF'] 59247 20387 LGGNCRTT True NCI_RA007_Epitope_Rep5 820.3861362882401 820.38502993586 85.354 2 -2.125450418466798 0.450852833608441 1.0 ['ENSG00000170759|ENST00000302418|KIF5B', 'KIF5B|p.E334Gfs*12|1|0.31|ENSG00000170759|chr10:32034800-32034801|-/C|frameshift_variant', 'ENSG00000155980|ENST00000455537|KIF5A', 'ENSG00000168280|ENST00000435030|KIF5C', 'nc|ENSG00000168280|O60282-2|KIF5C'] 130529 20699 VTWRKQRRVK True NCI_RA007_Epitope_Rep2 1355.82622053203 1355.82512993586 85.602 2 -2.125803496125871 0.450852833608441 1.0 ['PYM1|p.G24V|1|0.37|ENSG00000170473|chr12:55903447-55903447|C/A|missense_variant'] 66674 12936 LSSVLTVAW True PC9_epitope_Rep5 974.54368247546 974.54258993586 54.77 2 -2.1259989069360214 0.450852833608441 1.0 ['nc|ENSG00000101384|P78504-2|JAG1', 'ENSG00000101384|ENST00000254958|JAG1'] 68754 18926 LVDMAKKL True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 82.731 2 -2.126123713930883 0.450852833608441 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 112759 21868 TPKQASAT True PC9_epitope_Rep5 802.4184819623399 802.41738993586 89.153 2 -2.1261406293264 0.450852833608441 1.0 ['BSN|p.A2085Pfs*109|1|0.57|ENSG00000164061|chr3:49655808-49655808|G/-|frameshift_variant', 'ENSG00000164061|ENST00000296452|BSN'] 33140 20672 GKPRKDKA True PC9_epitope_Rep6 898.5348491272598 898.53374993586 92.273 2 -2.1263449760696878 0.450852833608441 1.0 ['ENSG00000160801|ENST00000449590|PTH1R'] 133755 25200 WLLPGLREIKL True NCI_RA007_Epitope_Rep4 1336.8230922142 1336.82198993586 109.8 2 -2.1265384820346562 0.450852833608441 1.0 ['ENST00000586784.1_1_19:28284417-28288693:+|nuORF', 'ENST00000588122.5_1_19:28284417-28284552:+|nuORF'] 78672 22281 PECCPGEM True H1975_Epitope_Rep2 864.2815967603199 864.28048993586 92.08 2 -2.1265587238610024 0.450852833608441 1.0 ['ENST00000265382.7_1_9:71320618-71357449:+|nuORF'] 51931 21702 KKSSPSTG True PC9_epitope_Rep4 790.41848196234 790.41738993586 91.679 2 -2.1265909000450876 0.450852833608441 1.0 ['ENSG00000114331|ENST00000326793|ACAP2'] 110305 14591 TIHIWIIFYSH True PC9_epitope_Rep6 1428.7554065772 1428.7543099358602 68.022 2 -2.1270906789070736 0.4508587580373711 1.0 ['L1ME1_dup14741|chr8:25510836-25512219:-|1.1935286187833651|0.2188578600898351|2.45|501.0|72|1|anti-sense'] 109323 16043 TGGGGGGD True PC9_epitope_Rep4 576.21396849936 576.2134249679301 69.644 1 -2.127256219883809 0.4508598183269683 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 131925 8851 VYEWWFRWRLD True NCI_RA007_Epitope_Rep1 1654.8044820279397 1654.8028349037902 38.429 3 -2.127508008619583 0.4508598183269683 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 118422 15862 VDNSNCWQPY True NCI_RA007_Epitope_Rep3 1224.48697252832 1224.4858699358601 70.042 2 -2.128257253644831 0.4509088947623928 1.0 ['ENST00000420492.2_1_9:101369387-101369513:+|nuORF'] 112754 14154 TPKPVEPA True PC9_epitope_Rep4 837.4596184983299 837.45852993586 62.345 2 -2.1283516109906717 0.45092074177157837 1.0 ['nc|ENSG00000137337|Q14676-2|MDC1', 'ENSG00000137337|ENST00000376406|MDC1', 'nc|ENSG00000137337|Q14676-3|MDC1'] 97553 17865 SGVGKWGP True NCI_RA007_Epitope_Rep4 786.4024379753798 786.40134993586 77.344 2 -2.1283522847378973 0.45092074177157837 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 64707 24506 LRLRPPLRAAT True PC9_epitope_Rep4 1262.7935234214199 1262.7924299358601 102.75 2 -2.128722299788992 0.4509541634753341 1.0 ['ENST00000589114.5_1_18:33877702-34289359:+|nuORF'] 90915 9080 RLEFLPRESV True PC9_epitope_Rep2 1244.6877209402 1244.68606490379 40.269 3 -2.1287360623082012 0.4509541634753341 1.0 ['ENST00000444836.5_1_1:12072009-12072201:+|nuORF'] 95880 23150 SDRDSGSN True H1975_Epitope_Rep1 836.32603812948 836.32548496793 96.249 1 -2.1288334991524 0.45096008629989215 1.0 ['ENSG00000239389|ENST00000289272|PCDHA13', 'PCDHA13|p.R619Hfs*37|1|0.2|ENSG00000239389|chr5:140884118-140884119|GC/-|frameshift_variant', 'nc|ENSG00000239389|Q9Y5I0-2|PCDHA13'] 108741 3983 TENELLQMFY True H1975_Epitope_Rep3 1286.58528958726 1286.5841899358602 20.447 2 -2.129192618211538 0.4509729892992751 1.0 ['ENSG00000106789|ENST00000375077|CORO2A'] 137376 21144 YLKLKADG True H1975_Epitope_Rep3 906.5174677276199 906.51636993586 88.309 2 -2.1293006617860026 0.4509729892992751 1.0 ['nc|ENSG00000115085|P43403-3|ZAP70', 'ENSG00000115085|ENST00000264972|ZAP70', 'ZAP70|p.M308Cfs*25|1|0.19|ENSG00000115085|chr2:97734551-97734551|G/-|frameshift_variant', 'ENST00000483781.5_1_2:98330105-98349944:+|nuORF'] 80680 7923 PLPTRQKD True H1975_Epitope_Rep2 953.5294293936498 953.52832993586 35.421 2 -2.1293109851878205 0.4509729892992751 1.0 ['SOCS2|p.L187Q|1|0.14|ENSG00000120833|chr12:93575142-93575142|T/A|missense_variant'] 134311 24699 WRVTLAVCVPA True PC9_epitope_Rep2 1213.66414904465 1213.66304993586 100.68 2 -2.129371308929611 0.4509729892992751 1.0 ['ENST00000446716.5_1_2:220084153-220084420:-|nuORF'] 117261 8480 VAAAAAAK True NCI_RA007_Epitope_Rep2 671.39662431895 671.3960749679301 37.629 1 -2.1295723359812606 0.4509831415227638 1.0 ['ENST00000274031.7_1_4:140477471-140477915:-|nuORF'] 53471 23216 KVIPKNRIHH True PC9_epitope_Rep6 1240.75165860944 1240.75056993586 102.4 2 -2.129672819899876 0.4509831415227638 1.0 ['ENSG00000145241|ENST00000273853|CENPC', 'ENST00000510189.5_1_4:68359569-68411187:-|nuORF', 'ENST00000533085.2_1_12:89894792-89896268:+|nuORF'] 40033 15826 HQVMAKPSVY True NCI_RA007_Epitope_Rep4 1158.5855643707798 1158.5844699358602 68.733 2 -2.129944971211619 0.4509831415227638 1.0 ['SPIN4|p.V224M|1|0.23|ENSG00000186767|chrX:63350150-63350150|C/T|missense_variant'] 59324 14490 LGIPCWRLV True PC9_epitope_Rep5 1055.59500685567 1055.5939099358602 60.736 2 -2.1300057526058955 0.4509831415227638 1.0 ['ENST00000366711.3_1_1:228363404-228363947:+|nuORF'] 53387 24886 KVARARLH True NCI_RA007_Epitope_Rep5 949.5933670628899 949.59226993586 103.22 2 -2.1301233377085462 0.4509831415227638 1.0 ['ENST00000399813.1_1_22:18043396-18070735:+|nuORF'] 37168 7044 GVTLPLKD True PC9_epitope_Rep2 841.49091862661 841.48982993586 32.494 2 -2.1302621116139147 0.4509831415227638 1.0 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 34185 20428 GPGKADLY True H1975_Epitope_Rep2 819.4126683059098 819.41156993586 84.641 2 -2.1303514918719673 0.4509831415227638 1.0 ['nc|ENSG00000154864|Q9H5I5-2|PIEZO2', 'nc|ENSG00000154864|Q9H5I5|PIEZO2', 'nc|ENSG00000154864|Q9H5I5-4|PIEZO2', 'ENSG00000154864|ENST00000674853|PIEZO2'] 32163 23778 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 98.813 2 -2.130402031986898 0.4509831415227638 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 39455 24091 HNFLWSFKV True NCI_RA007_Epitope_Rep4 1176.60801406752 1176.60637490379 104.44 3 -2.130589874619239 0.4509831415227638 1.0 ['ENST00000600588.1_1_19:6593880-6593970:+|nuORF'] 131663 18696 VWKIKRMA True NCI_RA007_Epitope_Rep2 1030.6109912729798 1030.60988993586 77.524 2 -2.130884358029779 0.45099984899799384 1.0 ['nc|ENSG00000161203|Q96CW1-2|AP2M1', 'ENSG00000161203|ENST00000292807|AP2M1', 'ENST00000461733.5_1_3:183898306-183901401:+|nuORF'] 85885 25583 QNKKQRLL True PC9_epitope_Rep2 1026.62981214126 1026.6287099358601 104.09 2 -2.131190672410729 0.45100196294139216 1.0 ['ENST00000568684.1_1_16:69958981-69959194:+|nuORF'] 26403 14669 FILFILFRT True H1975_Epitope_Rep1 1168.7008518231996 1168.6997499358602 61.64 2 -2.1314166416096563 0.45100196294139216 1.0 ['ENST00000521861.5_2_8:117656215-117656317:-|nuORF'] 126246 17561 VPGYQGVN True H1975_Epitope_Rep3 832.4079172786398 832.40682993586 73.338 2 -2.1315423115063266 0.45100196294139216 1.0 ['ENSG00000134250|ENST00000256646|NOTCH2', 'ENST00000478864.1_1_1:120478044-120480072:-|nuORF'] 78684 24283 PEDCGQPGS True PC9_epitope_Rep3 888.3283466286 888.32724993586 98.718 2 -2.1316370173349646 0.45100196294139216 1.0 ['ENSG00000160161|ENST00000291495|CILP2'] 136846 22473 YIVRGLLHR True H1975_Epitope_Rep1 1125.6770966868498 1125.67546490379 93.484 3 -2.131724077621942 0.4510186693126544 1.0 ['IQCH|p.S577R|1|0.37|ENSG00000103599|chr15:67395389-67395389|C/A|missense_variant'] 102881 22703 SQHRHFTEK True PC9_epitope_Rep6 1168.57375381712 1168.57264993586 100.4 2 -2.1320609678543514 0.4510520809741051 1.0 ['ENSG00000089022|ENST00000550735|MAPKAPK5', 'nc|ENSG00000089022|Q8IW41|MAPKAPK5'] 100660 5123 SLQTRIVIQA True PC9_epitope_Rep4 1127.6662572196299 1127.6646149037902 26.363 3 -2.1320756727992602 0.4510520809741051 1.0 ['ENSG00000114030|ENST00000344337|KPNA1'] 97857 22051 SHKIRAGG True PC9_epitope_Rep3 824.4616841869998 824.46058993586 90.116 2 -2.132244440579527 0.4510580013373309 1.0 ['EIF2S2-ADRA1D|1|fusion', 'ENSG00000171873|ENST00000379453|ADRA1D'] 136109 12150 YGEPRKLL True H1975_Epitope_Rep2 974.5549158654999 974.55380993586 51.82 2 -2.1323761587379915 0.45107089705152814 1.0 ['ENSG00000198681|ENST00000356661|MAGEA1'] 121373 23366 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 101.44 2 -2.132618747546283 0.45107089705152814 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 63559 24286 LPLDRADR True PC9_epitope_Rep2 954.5246783663799 954.5241249679301 98.96 1 -2.1327583472234206 0.45107089705152814 1.0 ['ENST00000497906.5_1_X:122993690-123022483:+|nuORF', 'ENST00000422098.5_1_X:122993624-123019513:+|nuORF'] 80592 23951 PLPCSHPA True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 99.502 2 -2.132816120502735 0.45107089705152814 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 32479 14713 GGKSGKAP True H1975_Epitope_Rep2 700.3867879112398 700.38623496793 61.755 1 -2.1332121456258695 0.45107300765663755 1.0 ['FOXO3|p.S411Afs*30|1|0.22|ENSG00000118689|chr6:108664062-108664062|G/-|frameshift_variant', 'ENSG00000118689|ENST00000406360|FOXO3', 'ENST00000395675.4_1_17:18575090-18575600:-|nuORF', 'nc|ENSG00000118689|O43524-2|FOXO3', 'nc|ENSG00000184481|P98177-2|FOXO4', 'ENSG00000184481|ENST00000374259|FOXO4'] 121365 20207 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 88.045 2 -2.1332971868701813 0.45107300765663755 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 16976 12158 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 53.419 2 -2.1337091637357246 0.45107300765663755 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 122951 2704 VGWALGPLG True PC9_epitope_Rep3 868.4806882960798 868.47958993586 14.861 2 -2.133795936628065 0.45107300765663755 1.0 ['ENST00000431922.1_1_12:6729058-6729289:-|nuORF'] 135345 26651 YDDVDTSD True H1975_Epitope_Rep3 928.32978609724 928.32868993586 111.3 2 -2.133832882876493 0.45107892721959214 1.0 ['nc|ENSG00000082074|O15117|FYB1', 'ENSG00000082074|ENST00000512982|FYB1', 'nc|ENSG00000082074|O15117-3|FYB1'] 111457 14980 TLLCQLWMKIY True H1975_Epitope_Rep3 1410.7403507600197 1410.73924993586 63.008 2 -2.133907651748714 0.4510859016110596 1.0 ['MGA|p.K937Rfs*57|1|0.1|ENSG00000174197|chr15:41711074-41711074|A/-|frameshift_variant'] 27472 23897 FNVKFGRTTCT True PC9_epitope_Rep3 1272.6284918119197 1272.62683490379 97.206 3 -2.1339342332943163 0.4510859016110596 1.0 ['ENSG00000170367|ENST00000304710|CST5'] 109103 7455 TFGGLGSL True PC9_epitope_Rep3 750.39120458534 750.39010993586 33.68 2 -2.133944854058481 0.4510859016110596 1.0 ['nc|ENSG00000112787|Q9HCM7|FBRSL1', 'ENSG00000112787|ENST00000680143|FBRSL1'] 112546 23584 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 97.205 2 -2.134113435984566 0.45110260419474846 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 140538 17650 YYLIVALVTWL True NCI_RA007_Epitope_Rep4 1352.7744106862797 1352.7733099358602 76.369 2 -2.134259189126535 0.4511106318740565 1.0 ['L1ME1_dup14741|chr8:25510836-25512219:-|1.1935286187833651|0.2188578600898351|2.45|501.0|44|2|sense'] 127769 25776 VRKLISSS True PC9_epitope_Rep1 888.5392658013601 888.5387149679301 104.22 1 -2.1344237608344203 0.4511106318740565 1.0 ['nc|ENSG00000198961|O43164-2|PJA2', 'ENSG00000198961|ENST00000361189|PJA2'] 134756 2843 WWYRGSLFIYQ True NCI_RA007_Epitope_Rep2 1517.7455701694898 1517.74337987172 15.419 4 -2.1346348142946017 0.4511106318740565 1.0 ['ENST00000485507.5_1_1:40204572-40207704:+|nuORF', 'ENST00000495526.5_1_1:40205841-40208939:+|nuORF'] 90281 24336 RHRRYKHT True PC9_epitope_Rep4 1152.6376914863597 1152.63604490379 102.09 3 -2.1347512118047796 0.4511106318740565 1.0 ['ENSG00000102974|ENST00000264010|CTCF', 'nc|ENSG00000102974|P49711-2|CTCF', 'nc|ENSG00000124092|Q8NI51-5|CTCFL', 'nc|ENSG00000124092|Q8NI51-10|CTCFL', 'nc|ENSG00000124092|Q8NI51-2|CTCFL', 'ENSG00000124092|ENST00000243914|CTCFL', 'nc|ENSG00000124092|Q8NI51-3|CTCFL', 'nc|ENSG00000124092|Q8NI51-7|CTCFL', 'nc|ENSG00000124092|Q8NI51-11|CTCFL', 'nc|ENSG00000124092|Q8NI51-6|CTCFL', 'nc|ENSG00000124092|Q8NI51-9|CTCFL', 'nc|ENSG00000124092|Q8NI51-4|CTCFL', 'nc|ENSG00000124092|Q8NI51-8|CTCFL'] 34031 22708 GNLFMILLIRT True PC9_epitope_Rep4 1289.7529640490498 1289.75131490379 95.572 3 -2.1347779976774692 0.4511106318740565 1.0 ['OR5M1|p.C44F|1|0.83|ENSG00000255012|chr11:56613372-56613372|C/A|missense_variant'] 53489 22382 KVLDQKEHRL True PC9_epitope_Rep3 1264.72516907808 1264.7240699358601 91.37 2 -2.1351575326604024 0.45113325138556426 1.0 ['nc|ENSG00000197451|Q99729-3|HNRNPAB', 'nc|ENSG00000197451|Q99729-4|HNRNPAB', 'nc|ENSG00000197451|Q99729|HNRNPAB', 'ENSG00000197451|ENST00000358344|HNRNPAB'] 55830 17394 LDERANLPEI True PC9_epitope_Rep3 1168.6088019131598 1168.6077099358602 72.075 2 -2.135226072972353 0.45113325138556426 1.0 ['ENST00000587908.1_1_19:56832840-56833431:-|nuORF'] 56331 20607 LDREWSYPP True NCI_RA007_Epitope_Rep1 1161.5454733806098 1161.54487496793 84.38 1 -2.135266022974985 0.45113430518416286 1.0 ['CDC42BPB|p.V210Rfs*9|1|0.32|ENSG00000198752|chr14:102986549-102986550|-/G|frameshift_variant'] 54168 2984 KYNYFFAPLQ True PC9_epitope_Rep3 1289.6444591458899 1289.64280490379 16.327 3 -2.1353851969981177 0.45113430518416286 1.0 ['ABCA13|p.V3523F|1|0.15|ENSG00000179869|chr7:48352366-48352366|G/T|missense_variant'] 97552 18414 SGVGKWGP True NCI_RA007_Epitope_Rep2 786.4024379753798 786.40134993586 76.392 2 -2.135447600224295 0.45114614107346945 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 106345 21191 SVSFSPLFIFQ True NCI_RA007_Epitope_Rep4 1270.65977485686 1270.6586699358602 91.88 2 -2.1354485197438153 0.45114614107346945 1.0 ['ENST00000548283.6_1_12:112373822-112373960:-|nuORF'] 99019 7617 SKPPYSFSL True NCI_RA007_Epitope_Rep3 1024.52294703088 1024.52184993586 37.09 2 -2.135729784169856 0.4511628408466042 1.0 ['FOXN2-SPTBN1|1|fusion', 'FOXN2-SPTBN1|2|fusion', 'FOXN2|p.E174Kfs*28|1|0.28|ENSG00000170802|chr2:48346733-48346733|G/-|frameshift_variant', 'ENSG00000170802|ENST00000340553|FOXN2', 'nc|ENSG00000170802|P32314-2|FOXN2'] 101702 24526 SPGLIKKF True NCI_RA007_Epitope_Rep2 888.54328855264 888.54274496793 103.03 1 -2.1358114173633496 0.4511746757377438 1.0 ['ENSG00000187741|ENST00000389301|FANCA', 'nc|ENSG00000187741|O15360-3|FANCA'] 52975 18394 KRPGKLTST True NCI_RA007_Epitope_Rep2 986.58727862294 986.58618993586 76.311 2 -2.1359369396828676 0.4511746757377438 1.0 ['nc|ENSG00000111877|Q9NXL9-4|MCM9', 'ENSG00000111877|ENST00000619706|MCM9'] 81565 26047 PRIKKQLRVLA True H1975_Epitope_Rep1 1320.87177374212 1320.8701349037901 108.12 3 -2.136510096391823 0.4511865101184893 1.0 ['nc|ENSG00000270379|A2RTY3-3|HEATR9', 'ENSG00000270379|ENST00000604834|HEATR9'] 81705 17307 PRWKRERRTEH True NCI_RA007_Epitope_Rep2 1549.83382509361 1549.83272993586 72.057 2 -2.1366213513829146 0.4511865101184893 1.0 ['ENST00000591270.1_1_17:49270805-49337516:-|nuORF'] 64724 24696 LRPRNEQRE True PC9_epitope_Rep2 1196.63741670284 1196.63687496793 100.67 1 -2.136771468552903 0.45118756266643667 1.0 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1'] 59915 22962 LHIKAARGAR True PC9_epitope_Rep1 1091.6675946323098 1091.66648993586 93.124 2 -2.136800543322809 0.45118756266643667 1.0 ['ENST00000512974.5_1_5:71403115-71403284:+|nuORF'] 58515 19136 LFACSVHE True NCI_RA007_Epitope_Rep5 904.4112884069199 904.41018993586 80.478 2 -2.1374259984358006 0.4512004484836724 1.0 ['nc|ENSG00000117602|Q9UKA8-5|RCAN3', 'ENSG00000117602|ENST00000374395|RCAN3', 'nc|ENSG00000117602|Q9UKA8-4|RCAN3', 'nc|ENSG00000117602|Q9UKA8-3|RCAN3', 'nc|ENSG00000117602|Q9UKA8-2|RCAN3'] 97555 23243 SGVGKWGP True PC9_epitope_Rep5 786.4024379753798 786.40134993586 94.388 2 -2.1374555660857824 0.4512004484836724 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 106615 23269 SWLGFGRP True PC9_epitope_Rep6 918.47118624154 918.4706349679301 102.6 1 -2.137620634396153 0.4512004484836724 1.0 ['ENST00000489822.5_1_10:121347751-121356470:-|nuORF'] 11552 22561 DGPGNTLAH True H1975_Epitope_Rep2 880.4038945273601 880.40278993586 93.213 2 -2.137630020684825 0.4512004484836724 1.0 ['ENST00000533366.5_1_11:102395628-102401431:-|nuORF', 'ENSG00000137673|ENST00000260227|MMP7'] 27471 20234 FNVKFGRTTCT True NCI_RA007_Epitope_Rep5 1272.6284918119197 1272.62683490379 84.77 3 -2.138037871797554 0.4512171456909377 1.0 ['ENSG00000170367|ENST00000304710|CST5'] 16981 13902 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 60.154 2 -2.138377960563984 0.451244623163251 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 97550 18559 SGVGKWGP True H1975_Epitope_Rep1 786.4024379753798 786.40134993586 77.374 2 -2.138601062682349 0.45124567436746044 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 15409 5381 EALYFGSDY True PC9_epitope_Rep3 1063.4498416602698 1063.4487499358602 25.771 2 -2.1386678123975282 0.45124567436746044 1.0 ['ENSG00000109927|ENST00000392793|TECTA'] 138660 10313 YRRYKHFDWLY True H1975_Epitope_Rep3 1645.8153810648098 1645.8142899358602 44.722 2 -2.1389142930606884 0.4512731506435825 1.0 ['ENSG00000173548|ENST00000308527|SNX33'] 121383 21409 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 89.412 2 -2.139088454922218 0.45127906600692086 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 26623 8783 FKRFWWRHYQD True NCI_RA007_Epitope_Rep1 1667.8109643907098 1667.80930490379 38.165 3 -2.139454567000194 0.45128918208080027 1.0 ['ENST00000354179.8_2_5:176671236-176673694:+|nuORF'] 93497 25631 RSKRKGSA True PC9_epitope_Rep5 888.5253470727198 888.52424993586 103.92 2 -2.1396802811889284 0.45128918208080027 1.0 ['nc|ENSG00000165304|Q14680-3|MELK', 'nc|ENSG00000165304|Q14680-4|MELK', 'nc|ENSG00000165304|Q14680-5|MELK', 'nc|ENSG00000165304|Q14680-2|MELK', 'nc|ENSG00000165304|Q14680-8|MELK', 'nc|ENSG00000165304|Q14680-7|MELK', 'nc|ENSG00000165304|Q14680-6|MELK', 'ENSG00000165304|ENST00000298048|MELK'] 93711 20509 RTNRHILPP True H1975_Epitope_Rep3 1102.6359601508598 1102.63486993586 85.729 2 -2.1396873791988074 0.45128918208080027 1.0 ['LTR2752_dup21|chr2:81481148-81482372:-|1.992639235350852|0.0780133736102343|4.67|458.0|13|2|sense'] 2623 24350 AESPGTNSLLP True H1975_Epitope_Rep3 1084.5400536470001 1084.53894993586 101.4 2 -2.1398516195160555 0.45128918208080027 1.0 ['nc|ENSG00000157111|Q8WVE6-2|TMEM171', 'ENSG00000157111|ENST00000454765|TMEM171'] 64676 23788 LRKKRRNLTML True H1975_Epitope_Rep2 1427.8871065364299 1427.88547490379 98.006 3 -2.139914007244836 0.45128918208080027 1.0 ['ENSG00000179240|ENST00000529331|GVQW3'] 82556 7353 PVGLPGRPGT True PC9_epitope_Rep4 949.53451477409 949.53340993586 35.618 2 -2.139981686584263 0.45128918208080027 1.0 ['ENST00000309957.2_2_13:111289482-111290624:+|nuORF'] 25992 24148 FHAILWHKHL True PC9_epitope_Rep2 1300.719295852 1300.7181899358602 98.411 2 -2.1400172762272156 0.45128918208080027 1.0 ['nc|ENSG00000136828|Q5JS13-2|RALGPS1', 'nc|ENSG00000136828|Q5JS13-7|RALGPS1', 'ENSG00000136828|ENST00000259351|RALGPS1'] 68272 24483 LTRIKACP True NCI_RA007_Epitope_Rep2 900.5215075622399 900.52040993586 102.85 2 -2.140082549689201 0.45128918208080027 1.0 ['ENST00000581996.2_1_18:74204720-74204858:+|nuORF'] 113477 24995 TQRRVYNF True H1975_Epitope_Rep2 1082.5621265042598 1082.56102993586 102.72 2 -2.1403260775043806 0.45128918208080027 1.0 ['PRICKLE1|p.R657Q|1|0.2|ENSG00000139174|chr12:42460335-42460335|C/T|missense_variant'] 32110 10142 GEYGVFAA True NCI_RA007_Epitope_Rep3 812.3704691407598 812.36936993586 46.982 2 -2.1404255274903985 0.45129509663371886 1.0 ['nc|ENSG00000278224|Q2TBC4-2|PRICKLE4', 'nc|ENSG00000278224|Q2TBC4|PRICKLE4', 'ENSG00000278224|ENST00000458694|PRICKLE4', 'ENSG00000124593|ENST00000335515|unknown'] 52454 22782 KPHYDGGLEI True H1975_Epitope_Rep1 1127.56112344475 1127.56002993586 94.755 2 -2.1404942077940543 0.45130101105913295 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 10323 8894 CHRYSRRRRSR True PC9_epitope_Rep1 1531.8127128095498 1531.8110549037901 39.05 3 -2.140793258739367 0.451312839527464 1.0 ['nc|ENSG00000115875|Q16629-3|SRSF7', 'nc|ENSG00000115875|Q16629-2|SRSF7', 'SRSF7|p.S134Kfs*30|1|0.27|ENSG00000115875|chr2:38748622-38748641|CTCTGGATCGAGAATGTGAT/-|frameshift_variant', 'nc|ENSG00000115875|Q16629-4|SRSF7', 'ENSG00000115875|ENST00000313117|SRSF7'] 125793 13840 VNLKLGDD True NCI_RA007_Epitope_Rep5 872.4603467743199 872.45924993586 59.91 2 -2.1409739801370606 0.451312839527464 1.0 ['ENST00000528824.1_1_1:99156655-99156700:+|nuORF'] 123465 23484 VIFPDVSH True NCI_RA007_Epitope_Rep3 912.4705175352001 912.46942993586 101.91 2 -2.1413302725956496 0.4513510891708074 1.0 ['ENST00000381482.7_1_20:2125208-2125481:+|nuORF'] 39426 16827 HMHGLAFL True NCI_RA007_Epitope_Rep3 924.4639926861199 924.46288993586 74.061 2 -2.141550185774422 0.4513622451179032 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 62403 22058 LLRSKRHR True PC9_epitope_Rep4 1064.6679289854799 1064.66682993586 93.068 2 -2.1416292567089017 0.4513622451179032 1.0 ['ENSG00000152969|ENST00000409021|JAKMIP1', 'nc|ENSG00000152969|Q96N16-7|JAKMIP1', 'JAKMIP1|p.T470Rfs*22|1|0.15|ENSG00000152969|chr4:6064903-6064903|T/-|frameshift_variant', 'nc|ENSG00000152969|Q96N16-4|JAKMIP1', 'nc|ENSG00000152969|Q96N16|JAKMIP1', 'nc|ENSG00000152969|Q96N16-6|JAKMIP1'] 113934 23689 TRIVWWQQKVQ True PC9_epitope_Rep3 1470.8095674083802 1470.80791490379 96.405 3 -2.1418748795557483 0.4513622451179032 1.0 ['ENST00000497489.5_1_9:109691986-109693263:+|nuORF'] 26878 4261 FLFFLVIYTLT True PC9_epitope_Rep1 1375.7791617135497 1375.77751490379 21.282 3 -2.1418853487819605 0.4513622451179032 1.0 ['ENSG00000149133|ENST00000278409|OR5F1', 'OR5F1|p.V158Sfs*37|1|0.36|ENSG00000149133|chr11:55994154-55994154|C/-|frameshift_variant'] 10989 21186 DDDFDWIISK True PC9_epitope_Rep6 1252.5611830144 1252.56008993586 94.34 2 -2.1422309665839316 0.4513622451179032 1.0 ['ENST00000306984.6_1_7:40172470-40172641:-|nuORF'] 45190 15344 IREQWWRWNRW True NCI_RA007_Epitope_Rep1 1714.8593115654596 1714.85820993586 63.762 2 -2.142386126318766 0.4513622451179032 1.0 ['ENST00000510393.5_1_1:16083148-16084686:+|nuORF'] 59899 17891 LHHGPLCL True NCI_RA007_Epitope_Rep3 888.46399268612 888.46288993586 78.414 2 -2.142407238594434 0.4513622451179032 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 96859 5106 SESQGSGVFLP True H1975_Epitope_Rep1 1106.5244035828598 1106.5233099358602 24.711 2 -2.1425023857496175 0.4513622451179032 1.0 ['ENSG00000173145|ENST00000371361|NOC3L'] 13210 9325 DLTGILWHM True NCI_RA007_Epitope_Rep5 1084.5375515492 1084.5364499358602 42.51 2 -2.142578073660097 0.4513622451179032 1.0 ['ENST00000485939.5_1_3:107364734-107463499:+|nuORF'] 129892 24969 VTLSYTYIIRT True PC9_epitope_Rep2 1328.7340024262799 1328.73290993586 101.71 2 -2.142795870771295 0.4513622451179032 1.0 ['ENSG00000179626|ENST00000641569|OR6C4'] 104348 7163 SSFAVFYFI True NCI_RA007_Epitope_Rep3 1079.53278343859 1079.5316899358602 35.292 2 -2.142863140611632 0.4513622451179032 1.0 ['nc|ENSG00000151067|Q13936-2|CACNA1C', 'nc|ENSG00000151067|Q13936-30|CACNA1C', 'nc|ENSG00000151067|Q13936-28|CACNA1C', 'nc|ENSG00000151067|Q13936-36|CACNA1C', 'nc|ENSG00000151067|Q13936-33|CACNA1C', 'nc|ENSG00000151067|Q13936-14|CACNA1C', 'nc|ENSG00000151067|Q13936-18|CACNA1C', 'nc|ENSG00000151067|Q13936-11|CACNA1C', 'nc|ENSG00000151067|Q13936-6|CACNA1C', 'nc|ENSG00000151067|Q13936-31|CACNA1C', 'nc|ENSG00000151067|Q13936-7|CACNA1C', 'nc|ENSG00000151067|Q13936-5|CACNA1C', 'nc|ENSG00000151067|Q13936-8|CACNA1C', 'nc|ENSG00000151067|Q13936|CACNA1C', 'nc|ENSG00000151067|Q13936-3|CACNA1C', 'nc|ENSG00000151067|Q13936-9|CACNA1C', 'nc|ENSG00000151067|Q13936-10|CACNA1C', 'nc|ENSG00000151067|Q13936-34|CACNA1C', 'nc|ENSG00000151067|Q13936-4|CACNA1C', 'nc|ENSG00000151067|Q13936-27|CACNA1C', 'nc|ENSG00000151067|Q13936-37|CACNA1C', 'ENSG00000151067|ENST00000399655|CACNA1C', 'nc|ENSG00000151067|Q13936-35|CACNA1C', 'nc|ENSG00000151067|Q13936-20|CACNA1C', 'nc|ENSG00000151067|Q13936-21|CACNA1C', 'nc|ENSG00000151067|Q13936-22|CACNA1C', 'nc|ENSG00000151067|Q13936-23|CACNA1C', 'nc|ENSG00000151067|Q13936-13|CACNA1C', 'nc|ENSG00000151067|Q13936-26|CACNA1C', 'nc|ENSG00000151067|Q13936-17|CACNA1C', 'nc|ENSG00000151067|Q13936-15|CACNA1C', 'nc|ENSG00000151067|Q13936-16|CACNA1C', 'nc|ENSG00000151067|Q13936-29|CACNA1C', 'nc|ENSG00000151067|Q13936-25|CACNA1C', 'nc|ENSG00000151067|Q13936-32|CACNA1C', 'nc|ENSG00000151067|Q13936-24|CACNA1C', 'nc|ENSG00000151067|Q13936-19|CACNA1C'] 72308 21478 MSFTVLHV True H1975_Epitope_Rep3 932.47897404392 932.47786993586 89.755 2 -2.1429305815833364 0.45136815786353984 1.0 ['ENST00000265689.8_1_11:67820608-67820851:-|nuORF'] 15004 24977 DYVPRKAKR True PC9_epitope_Rep3 1131.6512758618298 1131.6496349037902 101.42 3 -2.143143113751637 0.4513702542217624 1.0 ['nc|ENSG00000204071|Q6IPX3-2|TCEAL6', 'ENSG00000204071|ENST00000372774|TCEAL6', 'nc|ENSG00000204071|Q6IPX3|TCEAL6', 'ENSG00000196507|ENST00000372627|TCEAL3', 'ENSG00000204065|ENST00000372680|TCEAL5'] 60800 25524 LKIAAFNI True PC9_epitope_Rep1 888.5432885526401 888.54218993586 103.18 2 -2.1432680005942304 0.4513702542217624 1.0 ['ENSG00000213918|ENST00000246949|DNASE1'] 55762 8423 LDEDLLGPG True NCI_RA007_Epitope_Rep2 927.4549270407099 927.45382993586 37.405 2 -2.143315445031156 0.4513702542217624 1.0 ['ENST00000526878.5_1_11:460175-490579:+|nuORF', 'ENSG00000174915|ENST00000308020|PTDSS2'] 92468 15716 RQYPRLTR True NCI_RA007_Epitope_Rep4 1088.6203100867199 1088.61920993586 68.251 2 -2.143447526435889 0.4513702542217624 1.0 ['ENST00000336314.8_2_5:154195475-154195619:+|nuORF'] 44994 17890 IQKKKKKIL True H1975_Epitope_Rep2 1125.7961491903698 1125.79557496793 74.134 1 -2.143845470912454 0.4513748222212645 1.0 ['ENSG00000196476|ENST00000360321|C20orf96'] 245 18674 AAGEIKMP True H1975_Epitope_Rep3 815.4211248146299 815.4205749679301 78.302 1 -2.144225855587015 0.4513748222212645 1.0 ['SVIL|p.T1111M|1|0.07|ENSG00000197321|chr10:29522467-29522467|G/A|missense_variant'] 63575 23969 LPLKAWPGP True NCI_RA007_Epitope_Rep2 977.5698376536499 977.56928496793 100.61 1 -2.1444435921035323 0.4513748222212645 1.0 ['ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 61013 13630 LLANMPDH True PC9_epitope_Rep2 909.43783750793 909.43674993586 57.719 2 -2.1444915417963095 0.4513748222212645 1.0 ['RYR2|p.P4337H|1|0.3|ENSG00000198626|chr1:237784722-237784722|C/A|missense_variant'] 33989 23534 GNGGKKKV True H1975_Epitope_Rep1 786.47118624154 786.47008993586 97.769 2 -2.144533868977479 0.4513748222212645 1.0 ['ENST00000373839.7_1_1:28733953-28786728:+|nuORF'] 127962 18834 VRPQMETT True NCI_RA007_Epitope_Rep5 960.4698659122 960.46876993586 79.289 2 -2.1445432380996277 0.4513748222212645 1.0 ['ENST00000423112.2_1_9:3568814-3671485:+|nuORF'] 95837 13288 SDKLFEMV True H1975_Epitope_Rep2 967.4684689298699 967.46792496793 56.242 1 -2.1447388143165056 0.4513748222212645 1.0 ['nc|ENSG00000132305|Q16891-4|IMMT', 'ENSG00000132305|ENST00000410111|IMMT', 'nc|ENSG00000132305|Q16891-3|IMMT', 'nc|ENSG00000132305|Q16891-2|IMMT', 'IMMT|p.V308Dfs*2|1|0.17|ENSG00000132305|chr2:86159644-86159645|CA/-|frameshift_variant', 'ENST00000474969.5_1_2:86385703-86422514:-|nuORF', 'ENST00000486633.1_1_2:86400704-86422514:-|nuORF'] 125515 23827 VLVRISKHN True NCI_RA007_Epitope_Rep3 1064.6454622053998 1064.6443699358601 103.25 2 -2.1448001878249032 0.4513748222212645 1.0 ['ENST00000442955.2_1_9:6669517-6669934:-|nuORF'] 80595 21458 PLPCSHPA True PC9_epitope_Rep6 820.39015903952 820.38906993586 95.413 2 -2.144917956215443 0.4513748222212645 1.0 ['ENST00000534797.5_1_11:494532-494676:-|nuORF'] 62914 22255 LMWIIKHF True NCI_RA007_Epitope_Rep2 1086.60484326338 1086.6037499358602 92.424 2 -2.145054484329486 0.4513748222212645 1.0 ['ENST00000518667.1_1_8:66643803-66660021:-|nuORF'] 121384 21616 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 90.236 2 -2.145102039924862 0.4513748222212645 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 63520 23196 LPKHMQFKRT True PC9_epitope_Rep2 1284.7124962193998 1284.71138993586 94.705 2 -2.1451509573952676 0.4513748222212645 1.0 ['ENSG00000206530|ENST00000393845|CFAP44', 'nc|ENSG00000206530|Q96MT7-1|CFAP44'] 83233 6288 QAARACFALLW True NCI_RA007_Epitope_Rep2 1248.6437479532399 1248.64210490379 29.065 3 -2.1455922158341063 0.4513748222212645 1.0 ['ENSG00000142627|ENST00000358432|EPHA2', 'nc|ENSG00000142627|P29317-2|EPHA2', 'ENST00000461614.1_1_1:16475516-16482484:-|nuORF', 'EPHA2|p.G240Vfs*153|1|0.11|ENSG00000142627|chr1:16148482-16148482|C/-|frameshift_variant'] 134856 7910 YAAEISIRLF True H1975_Epitope_Rep1 1181.6444591458899 1181.6433699358602 35.377 2 -2.1456789164275647 0.4513748222212645 1.0 ['PRKCA|p.G450R|1|0.25|ENSG00000154229|chr17:66741684-66741684|G/A|missense_variant'] 109172 18006 TFRALLLHR True H1975_Epitope_Rep2 1125.6770966868498 1125.67546490379 74.591 3 -2.145688141252503 0.4513748222212645 1.0 ['nc|ENSG00000164638|Q7RTT9-2|SLC29A4', 'ENSG00000164638|ENST00000396872|SLC29A4'] 118440 10261 VDPSFLAA True PC9_epitope_Rep5 818.4174193331799 818.41632993586 44.456 2 -2.145703255731008 0.4513748222212645 1.0 ['nc|ENSG00000086758|Q7Z6Z7-2|HUWE1', 'nc|ENSG00000086758|Q7Z6Z7-3|HUWE1', 'ENSG00000086758|ENST00000262854|HUWE1'] 20347 20122 EPGIAGFKGE True PC9_epitope_Rep4 1003.49746055903 1003.49636993586 85.534 2 -2.145882204727935 0.4513748222212645 1.0 ['nc|ENSG00000139219|P02458-1|COL2A1', 'ENSG00000139219|ENST00000380518|COL2A1', 'ENST00000493991.5_1_12:48375847-48382223:-|nuORF'] 115520 17974 TVGRHQRR True H1975_Epitope_Rep3 1008.5689432202 1008.56837496793 75.289 1 -2.14590732572139 0.4513748222212645 1.0 ['chr10:46385807-46390871|178|17.38|0.65|4.74|+|2|ANXA8L1,ANXA8L1|1'] 76672 24805 NTKTQKIRLL True NCI_RA007_Epitope_Rep5 1213.75065554993 1213.7495499358602 102.9 2 -2.1459326428233387 0.4513748222212645 1.0 ['nc|ENSG00000114487|Q86VD1-2|MORC1', 'ENSG00000114487|ENST00000232603|MORC1'] 121645 22683 VGLGHPPT True NCI_RA007_Epitope_Rep3 776.4180880395201 776.41753496793 98.615 1 -2.146416312635433 0.4513769177727978 1.0 ['ENST00000325327.3_1_19:2429436-2429694:-|nuORF'] 129929 14686 VTMEDFMRN True PC9_epitope_Rep4 1141.4896153806098 1141.48850993586 64.424 2 -2.146492018282011 0.4513769177727978 1.0 ['ENSG00000136286|ENST00000258787|MYO1G', 'nc|ENSG00000136286|B0I1T2-2|MYO1G', 'ENST00000483585.5_1_7:45011810-45018578:-|nuORF', 'ENST00000480503.5_1_7:45014700-45018578:-|nuORF', 'nc|ENSG00000136286|B0I1T2-3|MYO1G', 'nc|ENSG00000136286|B0I1T2-4|MYO1G'] 16975 11950 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 52.622 2 -2.146581603162238 0.4513769177727978 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 100546 20429 SLPTWGKV True PC9_epitope_Rep2 886.4912529797799 886.49070496793 84.008 1 -2.1466716935627628 0.4513769177727978 1.0 ['ENSG00000183067|ENST00000380588|IGSF5'] 52855 16951 KRASKETADCP True H1975_Epitope_Rep1 1204.5870209227598 1204.5859299358601 70.622 2 -2.1466928621286403 0.4513828285766616 1.0 ['ENST00000579854.5_1_17:80015993-80018004:-|nuORF', 'ENST00000584871.5_1_17:80015993-80017016:-|nuORF', 'ENST00000578846.5_1_17:80015993-80016652:-|nuORF', 'ENSG00000169718|ENST00000306796|DUS1L'] 128413 16080 VSEDLVIR True PC9_epitope_Rep2 929.5181960036099 929.5176449679301 67.109 1 -2.1470996959064226 0.45139951302549075 1.0 ['nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1', 'ENSG00000143337|ENST00000606911|TOR1AIP1', 'nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1', 'ENST00000524653.1_1_1:179853135-179873887:+|nuORF', 'nc|ENSG00000143337|Q5JTV8-4|TOR1AIP1'] 94946 18710 RYPIKMLLKE True NCI_RA007_Epitope_Rep3 1289.75296404905 1289.75131490379 81.828 3 -2.147327796465601 0.4514054234585591 1.0 ['ENST00000492143.5_1_7:148514271-148514505:-|nuORF'] 18517 24370 EKQNKPQK True PC9_epitope_Rep2 998.5508931142198 998.54978993586 99.307 2 -2.1473616838892386 0.45141133376427495 1.0 ['ENSG00000136628|ENST00000366923|EPRS1'] 52048 18973 KLHSQLRTTVL True NCI_RA007_Epitope_Rep3 1294.7721192705 1294.77046490379 82.915 3 -2.1476158163273396 0.45143879079087706 1.0 ['ENSG00000132613|ENST00000338779|MTSS2', 'nc|ENSG00000132613|Q765P7-2|MTSS2'] 26601 10573 FKHCWDTFVDH True H1975_Epitope_Rep2 1433.61865540421 1433.61700490379 45.692 3 -2.147863917229654 0.4514398371093371 1.0 ['nc|ENSG00000128383|P31941-2|APOBEC3A', 'ENSG00000128383|ENST00000249116|APOBEC3A', 'ENSG00000239713|ENST00000407997|APOBEC3G'] 100888 13613 SLSHWRPRP True PC9_epitope_Rep2 1134.60466002258 1134.6035699358602 57.655 2 -2.1479228824988787 0.4514398371093371 1.0 ['ENSG00000152795|ENST00000295470|HNRNPDL'] 94149 14247 RWGGSPGW True PC9_epitope_Rep6 901.4194850218498 901.41893496793 66.692 1 -2.148311753109184 0.45144574678962335 1.0 ['ENST00000437791.2_1_9:139904571-139904793:-|nuORF'] 109398 21361 TGPHCPLP True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 89.225 2 -2.148799850468193 0.4514704298179468 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 82397 8021 PVAERPED True PC9_epitope_Rep4 911.4348603024699 911.43376993586 38.303 2 -2.149081669522438 0.4514704298179468 1.0 ['ENSG00000113594|ENST00000453190|LIFR', 'LIFR|p.R936H|1|0.07|ENSG00000113594|chr5:38482082-38482082|C/T|missense_variant'] 35212 21017 GSGLKAWP True H1975_Epitope_Rep2 814.43373810366 814.43264993586 86.994 2 -2.149149399687802 0.4514704298179468 1.0 ['ENST00000512406.5_1_5:8452349-8457673:-|nuORF'] 57339 5315 LEGSVGRD True NCI_RA007_Epitope_Rep1 831.40864555463 831.40754993586 24.752 2 -2.1492471804216207 0.4514704298179468 1.0 ['ENST00000332065.9_1_17:74078001-74078805:-|nuORF'] 38974 25001 HIYVGLQYF True PC9_epitope_Rep5 1138.5811306133398 1138.58002993586 101.33 2 -2.1493526373996428 0.4514704298179468 1.0 ['chr7:50504059-50513259|115|12.32|0.0|20.23|-|0|TE_info:L1PB1,L1PB1_dup5738,L1,LINE,donor,+,50513259,50517927|DDC,None|43'] 137623 23059 YLVNDKAA True PC9_epitope_Rep6 892.4654321547599 892.4648849679301 101.79 1 -2.149362902989499 0.4514704298179468 1.0 ['ENSG00000164756|ENST00000456015|SLC30A8'] 23608 7598 EYEQDERD True H1975_Epitope_Rep2 1082.4152470566999 1082.41414993586 34.179 2 -2.1495322735361047 0.45147079415344515 1.0 ['ENSG00000083896|ENST00000344157|YTHDC1', 'nc|ENSG00000083896|Q96MU7-2|YTHDC1'] 82679 24937 PVNGKAIC True PC9_epitope_Rep2 800.4214591678 800.42036993586 101.59 2 -2.149567571697898 0.45147079415344515 1.0 ['NOTCH1|p.D1267Mfs*178|1|0.6|ENSG00000148400|chr9:136506818-136506818|C/-|frameshift_variant', 'NOTCH1|p.G1165Qfs*13|1|0.54|ENSG00000148400|chr9:136507959-136507972|CAGGAGTAGCCGCC/-|frameshift_variant', 'NOTCH1|p.S1152Afs*27|1|0.33|ENSG00000148400|chr9:136508015-136508015|T/-|frameshift_variant', 'NOTCH1|p.G925Afs*254|1|0.3|ENSG00000148400|chr9:136509928-136509928|C/-|frameshift_variant', 'NOTCH1|p.A973Qfs*206|1|0.27|ENSG00000148400|chr9:136509786-136509786|G/-|frameshift_variant', 'ENSG00000148400|ENST00000651671|NOTCH1'] 82954 23070 PWSLTWHKD True PC9_epitope_Rep6 1168.5665431783598 1168.5654499358602 101.84 2 -2.149939411258669 0.45147079415344515 1.0 ['ENST00000370251.3_2_X:152610995-152612303:+|nuORF'] 125791 26983 VNLKLGDD True H1975_Epitope_Rep2 872.4603467743199 872.45924993586 111.34 2 -2.150146126857114 0.45147079415344515 1.0 ['ENST00000528824.1_1_1:99156655-99156700:+|nuORF'] 128748 12698 VSPTIKLRLS True PC9_epitope_Rep2 1112.69174369148 1112.6906499358602 54.149 2 -2.1502999284893476 0.45147079415344515 1.0 ['TTN|p.P17962S|1|0.19|ENSG00000155657|chr2:178593401-178593401|G/A|missense_variant'] 110750 18237 TKKATRTKA True NCI_RA007_Epitope_Rep2 1003.6138277239498 1003.61327496793 75.695 1 -2.150476556870257 0.45147079415344515 1.0 ['ENSG00000197566|ENST00000311331|ZNF624', 'nc|ENSG00000197566|Q9P2J8-2|ZNF624', 'ENST00000579528.1_1_17:16525604-16527848:-|nuORF'] 140069 24220 YVLWKEILFL True PC9_epitope_Rep2 1322.7638460025798 1322.76274993586 98.701 2 -2.150508801564219 0.45147079415344515 1.0 ['SS18L1-GPR108|1|fusion', 'ENSG00000125734|ENST00000264080|GPR108'] 120216 5027 VFLYFEDN True PC9_epitope_Rep1 1045.4756624852898 1045.47456993586 24.194 2 -2.1505187568226414 0.45147079415344515 1.0 ['ENSG00000125691|ENST00000479035|RPL23', 'ENST00000584583.1_1_17:37006387-37006753:-|nuORF', 'ENST00000584912.5_1_17:37006588-37006753:-|nuORF'] 79994 25250 PKARGGCP True NCI_RA007_Epitope_Rep4 784.4013924295599 784.40028993586 110.05 2 -2.150541652300155 0.45147079415344515 1.0 ['ENST00000485732.5_1_9:139747929-139748217:+|nuORF'] 125816 19113 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 80.389 2 -2.150593313602117 0.45147079415344515 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 88705 18411 RCRFLLFV True H1975_Epitope_Rep1 1052.5953412088397 1052.59424993586 76.729 2 -2.1506956420191745 0.45147079415344515 1.0 ['nc|ENSG00000101181|Q9H4K7-2|MTG2', 'ENSG00000101181|ENST00000370823|MTG2'] 25176 24099 FDVHTKIKVL True NCI_RA007_Epitope_Rep2 1198.70739375562 1198.70628993586 101.24 2 -2.1508578035365296 0.4514874733418065 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ECT2-KALRN|3|fusion', 'ECT2-KALRN|1|fusion'] 120374 21855 VFRRDQRL True PC9_epitope_Rep5 1088.6203100867199 1088.61920993586 89.102 2 -2.1511252622549817 0.4514933812996133 1.0 ['ENSG00000059588|ENST00000040877|TARBP1'] 86535 25934 QRAPKPLPRV True H1975_Epitope_Rep2 1160.71421047156 1160.71310993586 106.51 2 -2.1512806595027123 0.45151005988539916 1.0 ['MGAT5B|p.K228R|1|0.42|ENSG00000167889|chr17:76904415-76904415|A/G|missense_variant'] 71509 21431 MKPAIAPK True PC9_epitope_Rep4 854.5047948689399 854.50368993586 90.611 2 -2.1520623073991234 0.45152291917973464 1.0 ['nc|ENSG00000180263|Q6ZV73-2|FGD6', 'ENSG00000180263|ENST00000343958|FGD6'] 110784 22179 TKPILHVM True PC9_epitope_Rep5 937.54190865365 937.54080993586 90.34 2 -2.1520979190374505 0.45152291917973464 1.0 ['ABCD2|p.D234H|1|0.07|ENSG00000173208|chr12:39618916-39618916|C/G|missense_variant'] 52907 24856 KRHLCRTR True PC9_epitope_Rep2 1068.6086998571998 1068.6076099358602 101.29 2 -2.1521385641931765 0.45152291917973464 1.0 ['ENST00000591270.1_1_17:49270805-49337516:-|nuORF', 'nc|ENSG00000011258|Q05BQ5-3|MBTD1', 'MBTD1|p.P559Hfs*30|1|0.1|ENSG00000011258|chr17:51192790-51192796|GCTGGAG/-|frameshift_variant', 'ENSG00000011258|ENST00000586178|MBTD1'] 54693 7435 LAEENKNAV True PC9_epitope_Rep2 986.5032742154599 986.50216993586 33.974 2 -2.15234234537164 0.45152291917973464 1.0 ['CACNA1E|p.G403V|1|0.31|ENSG00000198216|chr1:181715374-181715374|G/T|missense_variant'] 33129 15943 GKPKTTTT True NCI_RA007_Epitope_Rep4 832.46543215476 832.46432993586 69.195 2 -2.152644584608806 0.45153473344103395 1.0 ['ENST00000352536.7_1_6:117593658-117593937:+|nuORF'] 36534 18147 GVKSSSVM True H1975_Epitope_Rep2 793.40038937005 793.3998449679301 75.214 1 -2.1528340467301805 0.45153473344103395 1.0 ['nc|ENSG00000067798|Q8IVL0-2|NAV3', 'ENSG00000067798|ENST00000397909|NAV3', 'NAV3|p.T1266N|2|0.5|ENSG00000067798|chr12:78121987-78121987|C/A|missense_variant'] 117585 11655 VAGPGFGG True NCI_RA007_Epitope_Rep1 660.3231250255199 660.3225749679301 49.308 1 -2.153075762028037 0.4515406403808252 1.0 ['nc|ENSG00000099904|Q9ULC8-2|ZDHHC8', 'ENSG00000099904|ENST00000334554|ZDHHC8', 'nc|ENSG00000099904|Q9ULC8-3|ZDHHC8'] 40932 6349 HVVQSISTQQ True PC9_epitope_Rep5 1125.57783613805 1125.57619490379 29.397 3 -2.1532830635062985 0.451557317020635 1.0 ['ENSG00000116459|ENST00000369722|ATP5PB'] 109322 17131 TGGGGGGD True PC9_epitope_Rep3 576.21396849936 576.2134249679301 71.049 1 -2.153358065365131 0.4515583604368148 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 106621 24176 SWNQILDPWV True NCI_RA007_Epitope_Rep2 1256.61897267404 1256.6178699358602 101.54 2 -2.1535443975814443 0.4515583604368148 1.0 ['ENSG00000160951|ENST00000292513|PTGER1'] 121370 20937 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 90.731 2 -2.1538814651926357 0.45156426686769696 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 13980 6637 DRQIVQYHLEM True H1975_Epitope_Rep1 1430.6976340008998 1430.69652993586 30.583 2 -2.1541754107404865 0.4515701731713621 1.0 ['ENST00000589878.5_1_19:34663659-34686187:+|nuORF'] 123920 17949 VKKAVPKEDI True NCI_RA007_Epitope_Rep5 1125.6757592741699 1125.67411490379 75.826 3 -2.154331334333138 0.45158198539705785 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 49315 22512 KHVVFGHV True PC9_epitope_Rep1 921.5184707871298 921.51736993586 91.394 2 -2.1543781842210947 0.45158198539705785 1.0 ['ENSG00000108179|ENST00000225174|PPIF', 'ENST00000448165.1_1_10:81113430-81113595:+|nuORF'] 22868 21304 EVERRWWRRR True PC9_epitope_Rep1 1527.8283457903497 1527.8272499358602 86.773 2 -2.1545323259596865 0.4515986603344856 1.0 ['ENST00000284971.7_1_21:27102007-27107256:-|nuORF'] 72667 18291 MYAFKKLEKKR True NCI_RA007_Epitope_Rep5 1440.82752597164 1440.82642993586 77.156 2 -2.154910349761334 0.4516330508383317 1.0 ['ENST00000400595.3_1_13:21893667-21894339:+|nuORF'] 30667 10298 GALHTPPI True H1975_Epitope_Rep2 804.4493881678 804.44828993586 44.617 2 -2.155334872922636 0.4516330508383317 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 62061 25451 LLMFLYIIK True PC9_epitope_Rep2 1152.6980749418797 1152.69757496793 103.58 1 -2.155355223322391 0.4516330508383317 1.0 ['nc|ENSG00000146842|Q96SK2-2|TMEM209', 'ENSG00000146842|ENST00000397622|TMEM209', 'nc|ENSG00000146842|Q96SK2-3|TMEM209'] 42978 22633 IGCKIVGLP True PC9_epitope_Rep1 898.5310096167799 898.52990993586 91.868 2 -2.155381488468941 0.4516330508383317 1.0 ['ENST00000420283.2_1_6:116573500-116573923:-|nuORF'] 97554 23027 SGVGKWGP True PC9_epitope_Rep2 786.4024379753798 786.40134993586 94.066 2 -2.1554413681717914 0.4516389558924879 1.0 ['ENST00000585601.1_1_19:45377690-45381750:+|nuORF'] 126637 14906 VPQGHPGP True NCI_RA007_Epitope_Rep1 787.3976869481098 787.39713496793 62.041 1 -2.156032675176099 0.45164798483918556 1.0 ['nc|ENSG00000196923|Q9NR12-4|PDLIM7'] 11553 24095 DGPGNTLAH True H1975_Epitope_Rep2 880.4038945273601 880.40278993586 99.214 2 -2.1563280811902295 0.45164798483918556 1.0 ['ENST00000533366.5_1_11:102395628-102401431:-|nuORF', 'ENSG00000137673|ENST00000260227|MMP7'] 90868 24945 RKYSIFQK True PC9_epitope_Rep3 1068.6080140675197 1068.6069099358601 101.31 2 -2.1563304643829118 0.45164798483918556 1.0 ['ENST00000593409.5_1_19:16757215-16757275:-|nuORF'] 71284 21433 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 89.504 2 -2.1564907302156113 0.45164798483918556 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 79849 16553 PIHGHSGG True NCI_RA007_Epitope_Rep1 760.36163579256 760.3610849679301 68.505 1 -2.156514581033288 0.45164798483918556 1.0 ['ENSG00000010818|ENST00000367603|HIVEP2'] 91980 27955 RPRDDNSKVGF True PC9_epitope_Rep5 1289.6476470333698 1289.64601490379 115.34 3 -2.156552880079055 0.45164798483918556 1.0 ['PCSK2|p.D544N|1|0.13|ENSG00000125851|chr20:17481783-17481783|G/A|missense_variant'] 103291 10325 SQTQKAKFS True PC9_epitope_Rep3 1023.5349086969098 1023.5343749679301 44.66 1 -2.1566802433509453 0.45164798483918556 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 103384 24523 SQVSPKLGLLR True PC9_epitope_Rep4 1196.7241064489199 1196.72300993586 102.81 2 -2.156855635330118 0.4516490260893909 1.0 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1', 'ENSG00000141446|ENST00000269214|ESCO1'] 13376 23035 DNEQNILWGL True PC9_epitope_Rep6 1200.5775017848798 1200.57640993586 101.7 2 -2.157029283935943 0.4516490260893909 1.0 ['ENSG00000184530|ENST00000329722|C6orf58'] 26879 4355 FLFFLVIYTLT True PC9_epitope_Rep1 1375.7791617135497 1375.77751490379 21.639 3 -2.157061930312379 0.4516549303357237 1.0 ['ENSG00000149133|ENST00000278409|OR5F1', 'OR5F1|p.V158Sfs*37|1|0.36|ENSG00000149133|chr11:55994154-55994154|C/-|frameshift_variant'] 82536 20702 PVFRITLPVLA True NCI_RA007_Epitope_Rep5 1224.7594293284799 1224.75832993586 86.593 2 -2.157181128533368 0.4516629162674017 1.0 ['ENSG00000174951|ENST00000645652|FUT1'] 88707 17503 RCRFLLFV True NCI_RA007_Epitope_Rep3 1052.5953412088397 1052.59424993586 76.802 2 -2.1572765525700754 0.4516629162674017 1.0 ['nc|ENSG00000101181|Q9H4K7-2|MTG2', 'ENSG00000101181|ENST00000370823|MTG2'] 32367 12626 GGEGQAWGP True H1975_Epitope_Rep3 857.3667807426498 857.36568993586 53.77 2 -2.157431023515966 0.4516629162674017 1.0 ['ENST00000572285.5_1_17:7133284-7137536:-|nuORF'] 52610 17866 KQCKNNLKLLR True NCI_RA007_Epitope_Rep2 1356.8023738529598 1356.80126993586 74.234 2 -2.157503528487839 0.4516629162674017 1.0 ['nc|ENSG00000163681|Q14BN4-5|SLMAP', 'nc|ENSG00000163681|Q14BN4-4|SLMAP', 'nc|ENSG00000163681|Q14BN4-2|SLMAP', 'nc|ENSG00000163681|Q14BN4-3|SLMAP', 'nc|ENSG00000163681|Q14BN4|SLMAP', 'ENSG00000163681|ENST00000671191|SLMAP'] 4560 21611 AKWKHPFSR True NCI_RA007_Epitope_Rep3 1155.6301464944297 1155.6285149037901 93.911 3 -2.1575533032287013 0.4516629162674017 1.0 ['ENSG00000186910|ENST00000334708|SERPINA11'] 133644 20020 WKLMPVPL True PC9_epitope_Rep6 982.5673951254998 982.56628993586 89.674 2 -2.1581829177596545 0.45167090133930493 1.0 ['ENST00000459909.1_1_21:34841018-34841192:-|nuORF'] 95896 24228 SDSYICFA True NCI_RA007_Epitope_Rep2 904.3636695081599 904.36256993586 101.74 2 -2.1583418147322537 0.45167090133930493 1.0 ['nc|ENSG00000204634|O95759|TBC1D8', 'ENSG00000204634|ENST00000409318|TBC1D8', 'nc|ENSG00000204634|O95759-2|TBC1D8'] 117655 10624 VAIQTIEEHP True PC9_epitope_Rep3 1135.5873381925899 1135.58569490379 45.814 3 -2.15858306287927 0.45167090133930493 1.0 ['ENSG00000188994|ENST00000369577|ZNF292', 'nc|ENSG00000188994|O60281-2|ZNF292'] 43070 8045 IGHRLGAHV True PC9_epitope_Rep4 958.5460825172999 958.54498993586 38.396 2 -2.1586848925704367 0.45167090133930493 1.0 ['PNLIPRP1|p.S171R|2|0.09|ENSG00000187021|chr10:116596261-116596261|C/G|missense_variant'] 23730 8182 EYINRSLNDLV True NCI_RA007_Epitope_Rep4 1334.68302948258 1334.6819299358601 38.259 2 -2.158721931612975 0.45167090133930493 1.0 ['ENSG00000178750|ENST00000315099|STX19'] 14719 22203 DVRPLYSRR True PC9_epitope_Rep4 1160.64143945412 1160.64034993586 93.648 2 -2.1588745746374456 0.4516719419503477 1.0 ['ENSG00000185010|ENST00000360256|F8', 'F8|p.R1708Afs*23|1|0.17|ENSG00000185010|chrX:154928668-154928668|G/-|frameshift_variant', 'F8|p.E1756Nfs*16|1|0.1|ENSG00000185010|chrX:154906527-154906527|C/-|frameshift_variant', 'F8|p.T1468Kfs*91|1|0.69|ENSG00000185010|chrX:154929363-154929387|CTTTGATCACCAGTCATCTCCAAGG/-|frameshift_variant', 'F8|p.E1053Kfs*2|1|0.57|ENSG00000185010|chrX:154930632-154930633|TC/-|frameshift_variant'] 30502 12375 GAHACARA True H1975_Epitope_Rep2 755.34969120987 755.3491449679301 52.687 1 -2.158950583231447 0.4516719419503477 1.0 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 59898 17311 LHHGPLCL True NCI_RA007_Epitope_Rep3 888.46399268612 888.46288993586 75.973 2 -2.15917615761802 0.4516886108928052 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 16984 14398 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 62.065 2 -2.1594810810516543 0.4516945138230988 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 124963 21822 VLMWNLKR True PC9_epitope_Rep6 1058.60590589254 1058.6048099358602 96.84 2 -2.159967627942571 0.45170249642061294 1.0 ['EIF3H|p.E217Nfs*30|1|0.19|ENSG00000147677|chr8:116655914-116655914|C/-|frameshift_variant'] 75692 14917 NQTRFTIPP True PC9_epitope_Rep2 1072.56654317836 1072.5654499358602 62.641 2 -2.1599952701562826 0.45170249642061294 1.0 ['ENSG00000112941|ENST00000230859|TENT4A', 'nc|ENSG00000112941|Q5XG87-2|TENT4A', 'ENST00000514697.1_1_5:6746314-6755055:+|nuORF'] 18935 15345 ELEVLSVLPP True NCI_RA007_Epitope_Rep1 1094.6223267189798 1094.6212299358601 63.766 2 -2.1601463020240113 0.45170249642061294 1.0 ['ENSG00000198198|ENST00000634258|SZT2', 'nc|ENSG00000198198|Q5T011-5|SZT2', 'nc|ENSG00000198198|Q5T011-4|SZT2', 'nc|ENSG00000198198|Q5T011-7|SZT2'] 41366 21541 IANQVAIQRKK True PC9_epitope_Rep6 1267.77245362367 1267.7713499358601 95.731 2 -2.160380172367643 0.45170249642061294 1.0 ['ENSG00000100425|ENST00000404760|BRD1', 'nc|ENSG00000100425|O95696|BRD1'] 86287 23047 QQDSGGGGGG True H1975_Epitope_Rep3 818.3154734457797 818.3149249679301 96.259 1 -2.1604133548910576 0.45170249642061294 1.0 ['nc|ENSG00000136352|P43699|NKX2-1', 'ENSG00000136352|ENST00000354822|NKX2-1'] 73617 10951 NGGGFGGA True H1975_Epitope_Rep1 635.2663384253899 635.26578496793 47.088 1 -2.161026715639243 0.45172714453331037 1.0 ['ENST00000580710.5_1_7:86782123-86783706:+|nuORF'] 85667 16746 QLQQEYSRK True PC9_epitope_Rep5 1178.60438523906 1178.6032899358602 69.419 2 -2.1610367918092495 0.45172714453331037 1.0 ['ENSG00000108465|ENST00000338399|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-4|CDK5RAP3', 'nc|ENSG00000108465|Q96JB5-2|CDK5RAP3'] 88495 16190 RAAKTVAH True H1975_Epitope_Rep2 852.49298431528 852.49188993586 67.483 2 -2.161206487060802 0.45172714453331037 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 90330 17741 RIFWLITGIMF True NCI_RA007_Epitope_Rep3 1395.7736994936297 1395.7720649037901 77.791 3 -2.1612999473938355 0.45172714453331037 1.0 ['nc|ENSG00000124532|Q9HD23-2|MRS2', 'ENSG00000124532|ENST00000378386|MRS2', 'nc|ENSG00000124532|Q9HD23-4|MRS2'] 52092 23519 KLLRKFKVYY True PC9_epitope_Rep3 1356.8281775946398 1356.8265449037901 95.746 3 -2.1613351441676047 0.45172714453331037 1.0 ['CYP24A1|p.K354Rfs*18|2|0.18|ENSG00000019186|chr20:54159053-54159053|T/-|frameshift_variant'] 91081 23739 RLLLRESE True PC9_epitope_Rep2 1014.5821932425 1014.58108993586 96.784 2 -2.1614277618803617 0.45172714453331037 1.0 ['ENST00000305997.7_1_2:8996496-8996592:-|nuORF'] 45667 10414 ISKDLGLDPR True NCI_RA007_Epitope_Rep2 1112.61897267404 1112.6178699358602 45.101 2 -2.1616630346781847 0.4517438105489774 1.0 ['PCDHGA8|p.P565Lfs*24|2|0.37|ENSG00000253767|chr5:141394507-141394508|CC/T|frameshift_variant', 'nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8', 'ENSG00000253767|ENST00000398604|PCDHGA8'] 110717 23747 TKEILDTALK True NCI_RA007_Epitope_Rep3 1130.65468947642 1130.65358993586 102.94 2 -2.1622528141891735 0.45174971205907366 1.0 ['ENSG00000100596|ENST00000216484|SPTLC2'] 25664 18116 FFDVLGNDR True H1975_Epitope_Rep1 1081.5192586327698 1081.5181699358602 75.479 2 -2.162469872919319 0.4517556134421218 1.0 ['ENSG00000182827|ENST00000366812|ACBD3'] 71280 20623 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 86.269 2 -2.1629525119910724 0.451761514698126 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 52284 23412 KPAATWPP True H1975_Epitope_Rep3 866.46503823194 866.46394993586 97.72 2 -2.1631772298304335 0.4517625531456865 1.0 ['nc|ENSG00000124440|Q9Y2N7-4|HIF3A', 'ENST00000475432.6_1_19:46800333-46815736:+|nuORF'] 127963 19066 VRPQMETT True NCI_RA007_Epitope_Rep5 960.4698659122 960.46876993586 80.202 2 -2.1631885009145964 0.4517625531456865 1.0 ['ENST00000423112.2_1_9:3568814-3671485:+|nuORF'] 122586 10546 VGTGGCSL True NCI_RA007_Epitope_Rep5 692.31632539292 692.3157749679301 47.201 1 -2.1632585532505524 0.45176845413643896 1.0 ['TUT1|p.Q564Tfs*71|1|0.25|ENSG00000149016|chr11:62576026-62576029|TCTG/-|frameshift_variant'] 79051 25031 PFRFIFLKR True PC9_epitope_Rep3 1222.7338832869798 1222.7327899358602 101.63 2 -2.1634905188223956 0.451778507237798 1.0 ['ENST00000527636.5_3_11:12696986-12785834:+|nuORF'] 91210 19531 RLRLQEPLR True H1975_Epitope_Rep2 1179.72002412799 1179.7189299358602 81.045 2 -2.163667923646074 0.451778507237798 1.0 ['ENST00000345117.2_1_8:42693107-42698298:-|nuORF'] 69678 24144 LVWHYVVR True NCI_RA007_Epitope_Rep2 1070.6025347642599 1070.60142993586 101.42 2 -2.163880294362882 0.451778507237798 1.0 ['UBE2J2|p.E43V|1|0.42|ENSG00000160087|chr1:1267865-1267865|T/A|missense_variant'] 52484 24425 KPLPNRKG True H1975_Epitope_Rep1 908.55558457184 908.55448993586 101.26 2 -2.1640358246560116 0.451778507237798 1.0 ['ENSG00000229924|ENST00000512047|FAM90A26'] 104173 25070 SSCMTMGT True PC9_epitope_Rep1 816.28159676032 816.28048993586 101.34 2 -2.1642439325845397 0.451778507237798 1.0 ['ENST00000437519.5_1_12:123892173-123892242:+|nuORF'] 39931 19761 HQMSRSDA True PC9_epitope_Rep5 930.3977636010999 930.39721496793 81.054 1 -2.164256440760124 0.451778507237798 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13'] 10238 7060 CFIYLSKPGQW True PC9_epitope_Rep2 1340.6587293110397 1340.65762993586 32.553 2 -2.1643114338389084 0.451778507237798 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 109399 22405 TGPHCPLP True PC9_epitope_Rep6 820.39015903952 820.38906993586 99.162 2 -2.164332477551235 0.451778507237798 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 64677 23876 LRKKRRNLTML True H1975_Epitope_Rep2 1427.8871065364299 1427.88547490379 98.349 3 -2.1643491570805002 0.451778507237798 1.0 ['ENSG00000179240|ENST00000529331|GVQW3'] 36867 6626 GVQCFSRYP True PC9_epitope_Rep3 1055.48585032951 1055.48474993586 30.511 2 -2.164474411448076 0.4517844074217573 1.0 ['CON__Q9U6Y5'] 131991 12654 VYGLHPLCFC True NCI_RA007_Epitope_Rep4 1150.53035799378 1150.52977496793 55.703 1 -2.1649088387566335 0.4518021072116575 1.0 ['ENSG00000197651|ENST00000358859|CCER1'] 25091 23427 FDIATKKA True NCI_RA007_Epitope_Rep4 892.50181766348 892.50072993586 101.68 2 -2.164993752050308 0.4518021072116575 1.0 ['nc|ENSG00000174226|Q8N9S9-2|SNX31', 'ENSG00000174226|ENST00000311812|SNX31'] 136848 19638 YIVRGLLHR True H1975_Epitope_Rep2 1125.6770966868498 1125.67546490379 81.477 3 -2.1650334317436806 0.4518021072116575 1.0 ['IQCH|p.S577R|1|0.37|ENSG00000103599|chr15:67395389-67395389|C/A|missense_variant'] 122578 13216 VGTFNIIV True NCI_RA007_Epitope_Rep4 861.4960040070499 861.49490993586 57.961 2 -2.1652747039630795 0.45182570515372944 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000532739.1_1_16:16459039-16460653:+|nuORF'] 60781 23406 LKFKNNNR True PC9_epitope_Rep6 1032.58286194884 1032.5817699358602 103.14 2 -2.1652928278434262 0.45182570515372944 1.0 ['ENST00000485752.1_1_2:101888144-101889379:-|nuORF'] 52136 3972 KLVEANNPQ True H1975_Epitope_Rep2 1011.53490869691 1011.53380993586 20.348 2 -2.165570885404688 0.45182570515372944 1.0 ['ENSG00000163785|ENST00000623711|RYK', 'nc|ENSG00000163785|P34925-2|RYK'] 44721 25529 IPQKTLLLHL True PC9_epitope_Rep3 1174.74377926434 1174.7426899358602 103.67 2 -2.1655733877399137 0.45182570515372944 1.0 ['nc|ENSG00000178177|Q8N3X6|LCORL'] 54590 6386 LADDHLIEV True NCI_RA007_Epitope_Rep2 1023.52367530687 1023.5225699358599 29.448 2 -2.1659617332183267 0.4518434022770807 1.0 ['ENST00000401008.6_1_1:147468098-147482410:-|nuORF', 'ENST00000425209.1_1_1:147466535-147481815:-|nuORF', 'ENSG00000174827|ENST00000417171|PDZK1', 'nc|ENSG00000215859|A8MUH7-2|PDZK1P1', 'nc|ENSG00000215859|A8MUH7|PDZK1P1'] 23154 5815 EVNQFPSD True PC9_epitope_Rep1 934.4032258210199 934.40212993586 27.184 2 -2.1659751435639243 0.4518434022770807 1.0 ['nc|ENSG00000132466|O75179-2|ANKRD17', 'ENSG00000132466|ENST00000358602|ANKRD17', 'nc|ENSG00000132466|O75179-6|ANKRD17', 'nc|ENSG00000132466|O75179-7|ANKRD17', 'ENST00000514252.1_1_4:73978989-74017230:-|nuORF', 'nc|ENSG00000131503|Q8IWZ3-6|ANKHD1', 'ENSG00000131503|ENST00000360839|ANKHD1', 'nc|ENSG00000131503|Q8IWZ3-4|ANKHD1'] 80361 12203 PLGPGGWA True PC9_epitope_Rep4 753.38097425481 753.37986993586 54.758 2 -2.166102879134699 0.4518434022770807 1.0 ['ENST00000243776.10_1_2:220403697-220404108:-|nuORF'] 134095 23267 WQVGLRFL True PC9_epitope_Rep3 1017.5759856632499 1017.57488993586 94.774 2 -2.1668757411519777 0.45187289494356025 1.0 ['OVCH1|p.G704Efs*9|1|0.31|ENSG00000187950|chr12:29464521-29464521|C/-|frameshift_variant', 'ENSG00000187950|ENST00000537054|OVCH1', 'nc|ENSG00000187950|Q7RTY7|OVCH1'] 92431 20379 RQTQLLLR True H1975_Epitope_Rep2 1026.62981214126 1026.6287099358601 84.448 2 -2.166896355370253 0.45187289494356025 1.0 ['ENST00000221980.4_1_19:10403354-10403878:+|nuORF'] 112505 20946 TNVLHKRQ True NCI_RA007_Epitope_Rep3 994.5672118846999 994.56610993586 91.18 2 -2.166987117333856 0.45187289494356025 1.0 ['ENST00000338700.9_1_4:154258246-154258330:+|nuORF'] 126609 10736 VPPPPRISL True PC9_epitope_Rep2 974.5913013742199 974.59020993586 46.615 2 -2.167074983543464 0.45187289494356025 1.0 ['ENST00000400445.7_1_13:35516530-35516806:+|nuORF'] 38239 8118 HEYKGCHLAR True PC9_epitope_Rep5 1212.58221032584 1212.58057490379 36.165 3 -2.167126119315781 0.45187289494356025 1.0 ['CON__Q2HJF0'] 108897 21342 TESHQKST True NCI_RA007_Epitope_Rep5 916.42502389476 916.42392993586 89.148 2 -2.167331269355218 0.4518787930960272 1.0 ['nc|ENSG00000087589|Q9NQ75-2|CASS4', 'ENST00000497244.1_1_20:54987478-55028248:+|nuORF', 'ENSG00000087589|ENST00000679887|CASS4'] 56050 14183 LDKVTKSP True PC9_epitope_Rep2 886.5123823471799 886.51128993586 59.823 2 -2.1675917719041147 0.45188086425066715 1.0 ['nc|ENSG00000166780|Q96MC5-2|BMERB1', 'ENSG00000166780|ENST00000300006|BMERB1'] 109321 16762 TGGGGGGD True PC9_epitope_Rep2 576.21396849936 576.2134249679301 69.722 1 -2.1682304666336667 0.45188086425066715 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 53292 20008 KTKYRKRLD True NCI_RA007_Epitope_Rep2 1206.71968977482 1206.71858993586 82.829 2 -2.1683138038758356 0.45188086425066715 1.0 ['ENSG00000236287|ENST00000413761|ZBED5'] 11224 13019 DENGHIPGGW True H1975_Epitope_Rep3 1080.4624720326399 1080.46187496793 55.314 1 -2.1683160917619637 0.45188086425066715 1.0 ['nc|ENSG00000133641|Q8N999-3|RLIG1'] 32162 23342 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 97.073 2 -2.16863629115391 0.45188676200006456 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 103274 16502 SQTHLKRL True NCI_RA007_Epitope_Rep3 981.57196291197 981.57086993586 72.709 2 -2.1691158831388346 0.45193187075671665 1.0 ['ENST00000501122.2_1_11:65197707-65198040:+|nuORF'] 137910 16630 YPPHPDYT True NCI_RA007_Epitope_Rep5 988.4290466460401 988.4279499358599 70.733 2 -2.1691814382349968 0.45193187075671665 1.0 ['ENSG00000130309|ENST00000252599|COLGALT1'] 5483 21024 AMKKACLP True PC9_epitope_Rep6 860.4612158047998 860.46010993586 93.691 2 -2.1692660927437593 0.45193187075671665 1.0 ['ENSG00000223569|ENST00000456464|USP17L15', 'ENSG00000232399|ENST00000429667|USP17L13', 'ENSG00000250844|ENST00000504209|USP17L18', 'ENSG00000250745|ENST00000506151|USP17L20', 'ENSG00000249811|ENST00000506414|USP17L21', 'ENSG00000249104|ENST00000511568|USP17L17', 'ENSG00000248933|ENST00000511280|USP17L22', 'ENSG00000235780|ENST00000515574|USP17L27', 'ENSG00000233136|ENST00000457736|USP17L11', 'ENSG00000248920|ENST00000515566|USP17L19', 'ENSG00000232264|ENST00000504481|USP17L24', 'ENSG00000231637|ENST00000511681|USP17L29', 'ENSG00000231051|ENST00000504543|USP17L28', 'ENSG00000230430|ENST00000509271|USP17L25', 'ENSG00000229579|ENST00000509660|USP17L26', 'ENSG00000228856|ENST00000504104|USP17L30', 'ENSG00000227551|ENST00000415041|USP17L12', 'ENSG00000227140|ENST00000507227|USP17L5', 'ENSG00000223443|ENST00000333796|USP17L2', 'ENSG00000225327|ENST00000530484|USP17L3', 'ENSG00000226430|ENST00000530447|USP17L7', 'ENSG00000230549|ENST00000529559|USP17L1', 'ENSG00000236125|ENST00000526929|USP17L4', 'ENSG00000237038|ENST00000527080|USP17L8', 'nc|ENSG00000205946|Q6QN14|USP17L6P'] 66649 8242 LSSSAGNSAP True PC9_epitope_Rep2 889.41412485789 889.41302993586 37.059 2 -2.1694214186468637 0.45193187075671665 1.0 ['ENSG00000112561|ENST00000373033|TFEB'] 91091 16484 RLLRLGDT True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 72.627 2 -2.169759831913662 0.4519700458350369 1.0 ['ENST00000576921.1_1_16:3072866-3073436:-|nuORF', 'nc|ENSG00000103145|Q9NWW0-2|HCFC1R1', 'ENSG00000103145|ENST00000248089|HCFC1R1'] 15683 22088 ECVCMEVG True H1975_Epitope_Rep3 868.3128968885999 868.31178993586 92.372 2 -2.169947793546611 0.45197594224417115 1.0 ['ENST00000427177.5_1_17:75496090-75496291:+|nuORF'] 48146 26340 KAQILKRRLVP True PC9_epitope_Rep2 1320.87177374212 1320.8701349037901 107.56 3 -2.1700379381435955 0.45199259769323463 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 69640 23340 LVVLPHIRP True NCI_RA007_Epitope_Rep4 1042.66513502082 1042.66402993586 101.34 2 -2.170351003981809 0.4519984937328528 1.0 ['UTP20|p.P2063Qfs*12|1|0.25|ENSG00000120800|chr12:101366616-101366616|C/-|frameshift_variant', 'UTP20|p.Q2453Sfs*7|1|0.13|ENSG00000120800|chr12:101375714-101375715|-/T|frameshift_variant', 'UTP20|p.L2489Sfs*27|1|0.16|ENSG00000120800|chr12:101379439-101379442|TTAC/-|frameshift_variant', 'ENSG00000120800|ENST00000261637|UTP20', 'UTP20|p.Q1049Lfs*8|1|0.14|ENSG00000120800|chr12:101327183-101327186|CCAA/-|frameshift_variant', 'UTP20|p.L531V|2|0.38|ENSG00000120800|chr12:101299977-101299977|C/G|missense_variant'] 35902 8278 GVAGYLIA True NCI_RA007_Epitope_Rep4 762.42759009406 762.42648993586 38.65 2 -2.170742876276436 0.4520054223867109 1.0 ['DNAJC13|p.T2217I|2|0.08|ENSG00000138246|chr3:132538200-132538200|C/T|missense_variant'] 35287 24603 GSQPDAKA True H1975_Epitope_Rep3 772.3715317699199 772.3709849679301 102.37 1 -2.170743493197304 0.4520054223867109 1.0 ['nc|ENSG00000156050|Q96MY7-2|FAM161B'] 15747 26225 EDEDDDHC True PC9_epitope_Rep4 976.27161959812 976.2705299358599 111.19 2 -2.1707866538556004 0.4520054223867109 1.0 ['USP34|p.G630C|1|0.36|ENSG00000115464|chr2:61348267-61348267|C/A|missense_variant'] 16974 11859 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 52.272 2 -2.171040226824215 0.452013383107592 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 59298 21881 LGHCGCGR True PC9_epitope_Rep1 801.33741227401 801.3368649679301 88.978 1 -2.17105298828046 0.452013383107592 1.0 ['ENST00000533173.1_1_8:145676645-145677062:-|nuORF'] 95861 24426 SDLWWFPY True PC9_epitope_Rep4 1112.4967322830398 1112.49562993586 102.44 2 -2.171103613892259 0.452013383107592 1.0 ['ENST00000379297.5_1_X:23723655-23723897:-|nuORF'] 30776 10885 GAPGNHSK True NCI_RA007_Epitope_Rep2 766.37220047626 766.37165496793 46.946 1 -2.1711073225941115 0.452013383107592 1.0 ['nc|ENSG00000133401|O15018-2|PDZD2', 'ENSG00000133401|ENST00000438447|PDZD2'] 100444 16518 SLPELRSL True NCI_RA007_Epitope_Rep1 913.5232813840499 913.52218993586 68.366 2 -2.171202151270287 0.452013383107592 1.0 ['nc|ENSG00000215845|Q8NFU3-3|TSTD1', 'ENSG00000215845|ENST00000423014|TSTD1', 'nc|ENSG00000215845|Q8NFU3-4|TSTD1', 'ENST00000486084.1_1_1:161008305-161008679:-|nuORF'] 100012 15488 SLKAANAA True NCI_RA007_Epitope_Rep1 744.41300265908 744.4124549679301 64.328 1 -2.1717048857484693 0.4520192783527336 1.0 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 121128 14483 VGGGALAP True PC9_epitope_Rep3 640.3544251538 640.3538749679301 60.819 1 -2.171795795469798 0.452020310684625 1.0 ['ENST00000421890.5_1_7:5862807-5863047:+|nuORF'] 79918 25202 PIPHLVLT True H1975_Epitope_Rep2 888.54328855264 888.54218993586 103.54 2 -2.1718576391100877 0.452020310684625 1.0 ['ENST00000354124.7_2_17:77045413-77045737:+|nuORF'] 134617 4454 WWFQLKVWSMA True PC9_epitope_Rep5 1480.7325629576399 1480.7309249037899 22.2 3 -2.1722904021146037 0.4520213429720949 1.0 ['ENSG00000198178|ENST00000360345|CLEC4C'] 66245 19656 LSPVRQDLLWP True H1975_Epitope_Rep1 1322.7346711326197 1322.73356993586 81.82 2 -2.1723033553669606 0.4520213429720949 1.0 ['ENSG00000176723|ENST00000315678|ZNF843'] 124950 16293 VLMHGPKL True NCI_RA007_Epitope_Rep5 893.5156939058099 893.51458993586 69.427 2 -2.172605001366932 0.45202723781452037 1.0 ['nc|ENSG00000185739|Q86TD4-3|SRL', 'ENSG00000185739|ENST00000399609|SRL', 'nc|ENSG00000185739|Q86TD4-1|SRL'] 64628 15608 LRFFFFFFFFW True H1975_Epitope_Rep1 1649.8223639382095 1649.82126993586 65.32 2 -2.1728424610776615 0.45204388984509464 1.0 ['ENST00000335154.9_1_12:50038759-50038969:-|nuORF'] 62463 17946 LLSLKKKMK True H1975_Epitope_Rep2 1087.7151219883501 1087.71457496793 74.35 1 -2.1731253146024447 0.45206054151741054 1.0 ['nc|ENSG00000151687|Q7Z5J8-3|ANKAR', 'nc|ENSG00000151687|Q7Z5J8-2|ANKAR', 'ENSG00000151687|ENST00000684021|ANKAR', 'ENST00000461516.5_1_2:190554359-190560904:+|nuORF'] 97744 19303 SHGGLDIV True PC9_epitope_Rep6 796.4079172786401 796.40682993586 86.896 2 -2.173207536053484 0.45206643574794003 1.0 ['nc|ENSG00000124233|P04279-2|SEMG1', 'ENSG00000124233|ENST00000372781|SEMG1'] 78020 23661 PALLVLLFC True PC9_epitope_Rep4 987.5827108364699 987.58160993586 99.357 2 -2.173809751028232 0.4520782238285788 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.G241Efs*36|1|0.52|ENSG00000126259|chr19:35860343-35860343|G/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 61363 2825 LLEGTPDTP True NCI_RA007_Epitope_Rep1 941.4705771048499 941.46948993586 14.816 2 -2.173866667931344 0.4520782238285788 1.0 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000547581.5_1_12:48529049-48539488:+|nuORF'] 11571 22350 DGSFFKDN True H1975_Epitope_Rep3 928.3926611373199 928.39156993586 93.45 2 -2.1741581296512664 0.45210563115150865 1.0 ['LTR8_dup2971|chr17:8380695-8381392:+|3.030860960331466|0.2447948664736123|3.63|502.0|42|2|anti-sense'] 74192 25506 NHYWYQMYI True H1975_Epitope_Rep1 1316.5648289262 1316.56372993586 105.71 2 -2.174371307926826 0.45211152464341803 1.0 ['ENSG00000077147|ENST00000371142|TM9SF3', 'PIK3AP1-TM9SF3|1|fusion'] 117936 16970 VARAINQK True NCI_RA007_Epitope_Rep5 898.5348491272599 898.53374993586 72.034 2 -2.175420432010313 0.45219860597194733 1.0 ['ENSG00000215305|ENST00000380445|VPS16', 'ENST00000380443.5_1_20:2843179-2847217:+|nuORF', 'nc|ENSG00000215305|Q9H269-2|VPS16', 'ENST00000487461.1_1_20:2844020-2844759:+|nuORF'] 114498 25147 TSFPKTGK True PC9_epitope_Rep1 864.4705175351999 864.46942993586 101.61 2 -2.1754343743636495 0.45219860597194733 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 92333 17773 RQNQSNLK True H1975_Epitope_Rep2 986.52574099554 986.52464993586 73.684 2 -2.176473024440492 0.45222217441810436 1.0 ['nc|ENSG00000101977|P10911|MCF2', 'nc|ENSG00000101977|P10911-4|MCF2', 'nc|ENSG00000101977|P10911-3|MCF2', 'ENSG00000101977|ENST00000519895|MCF2', 'nc|ENSG00000101977|P10911-6|MCF2', 'nc|ENSG00000101977|P10911-2|MCF2'] 88706 17199 RCRFLLFV True NCI_RA007_Epitope_Rep3 1052.5953412088397 1052.59424993586 75.547 2 -2.176505219902279 0.45222217441810436 1.0 ['nc|ENSG00000101181|Q9H4K7-2|MTG2', 'ENSG00000101181|ENST00000370823|MTG2'] 121364 17624 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 77.278 2 -2.176558937128466 0.45222217441810436 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 92334 17838 RQNQSNLK True NCI_RA007_Epitope_Rep2 986.52574099554 986.52464993586 74.126 2 -2.176603013594416 0.45222217441810436 1.0 ['nc|ENSG00000101977|P10911|MCF2', 'nc|ENSG00000101977|P10911-4|MCF2', 'nc|ENSG00000101977|P10911-3|MCF2', 'ENSG00000101977|ENST00000519895|MCF2', 'nc|ENSG00000101977|P10911-6|MCF2', 'nc|ENSG00000101977|P10911-2|MCF2'] 121381 21135 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 88.317 2 -2.176883319145562 0.45223012142788 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 112554 23557 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 97.923 2 -2.1770066934794805 0.45223012142788 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 87315 6939 QSWLRHDRRRW True NCI_RA007_Epitope_Rep1 1594.8341594467797 1594.8325049037899 30.994 3 -2.177019377849287 0.45223012142788 1.0 ['ENSG00000174010|ENST00000328046|KLHL15'] 119700 11765 VETDQRKM-[Oxidation] True NCI_RA007_Epitope_Rep2 1021.4862446327699 1021.4856749679301 50.361 1 -2.177255952423721 0.45223012142788 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 43239 23471 IHAVCGKN True NCI_RA007_Epitope_Rep3 840.4276071774 840.4265099358599 101.86 2 -2.1772633798714582 0.45223012142788 1.0 ['ENST00000477995.1_1_6:170176000-170181606:+|nuORF', 'nc|ENSG00000130023|Q5T6L9-4|ERMARD', 'nc|ENSG00000130023|Q5T6L9-2|ERMARD', 'nc|ENSG00000130023|Q5T6L9-3|ERMARD', 'ENSG00000130023|ENST00000366773|ERMARD'] 120784 7631 VGCSGHSL True NCI_RA007_Epitope_Rep4 758.33812346666 758.3375749679301 36.005 1 -2.1776422528624186 0.45223114896912203 1.0 ['ENST00000396504.6_1_22:41923400-41923763:-|nuORF'] 112550 21290 TPAHHPPG True NCI_RA007_Epitope_Rep3 812.3929359208399 812.39182993586 92.561 2 -2.1776700582880544 0.45223114896912203 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 40258 8382 HRLLLLGRKV True NCI_RA007_Epitope_Rep3 1203.7927951454299 1203.7911449037902 40.068 3 -2.1779948979865753 0.45223217646615976 1.0 ['nc|ENSG00000087460|Q5JWF2-3|GNAS'] 84042 11004 QEPTRPQP True PC9_epitope_Rep3 951.4773938207898 951.47628993586 47.316 2 -2.1780940908825106 0.45223217646615976 1.0 ['ENSG00000168334|ENST00000340369|XIRP1', 'nc|ENSG00000168334|Q702N8-2|XIRP1'] 75276 17708 NPQLGAYA True NCI_RA007_Epitope_Rep5 832.40791727864 832.40682993586 74.896 2 -2.1784292792984963 0.4522488223527134 1.0 ['ENSG00000128335|ENST00000358502|APOL2'] 109923 20991 THRGPAKH True H1975_Epitope_Rep3 902.48348226074 902.4823899358599 87.672 2 -2.178605605254334 0.4522654678812256 1.0 ['nc|ENSG00000102935|Q2M1K9-2|ZNF423', 'nc|ENSG00000102935|Q2M1K9|ZNF423', 'ENSG00000102935|ENST00000563137|ZNF423'] 36287 10409 GVGPTPGG True PC9_epitope_Rep5 640.31803964508 640.3174949679301 45.024 1 -2.1788167634402593 0.45228211305170785 1.0 ['ENST00000462188.1_1_22:22049506-22049776:+|nuORF'] 99046 14957 SKTSGKAK True NCI_RA007_Epitope_Rep3 805.4657665079299 805.46466993586 66.275 2 -2.1797648800002603 0.4523476652399286 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 122579 13373 VGTFNIIV True NCI_RA007_Epitope_Rep5 861.4960040070499 861.49490993586 58.127 2 -2.1797904572939144 0.4523476652399286 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000532739.1_1_16:16459039-16460653:+|nuORF'] 447 19724 AALSSHRHP True PC9_epitope_Rep2 974.5046116281401 974.50406496793 81.258 1 -2.1802745514344792 0.45238581737232086 1.0 ['nc|ENSG00000117868|A0FGR8|ESYT2', 'nc|ENSG00000117868|A0FGR8-6|ESYT2'] 118555 4940 VDVYFETSA True PC9_epitope_Rep1 1029.4654917244097 1029.46438993586 23.864 2 -2.180329625027455 0.4523868414543656 1.0 ['nc|ENSG00000084234|Q06481-5|APLP2', 'nc|ENSG00000084234|Q06481-4|APLP2', 'nc|ENSG00000084234|Q06481-2|APLP2', 'ENSG00000084234|ENST00000338167|APLP2', 'nc|ENSG00000084234|Q06481|APLP2', 'nc|ENSG00000084234|Q06481-6|APLP2'] 119108 22758 VEIFRLVSKY True PC9_epitope_Rep1 1252.7179584393198 1252.7168699358601 92.347 2 -2.1804451469793333 0.4523868414543656 1.0 ['ENSG00000147113|ENST00000398000|DIPK2B', 'nc|ENSG00000147113|Q9H7Y0-2|DIPK2B'] 97742 17983 SHGFWLKRSSY True H1975_Epitope_Rep2 1366.6782188856598 1366.6771299358602 74.499 2 -2.180615784601158 0.4523878654923595 1.0 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF'] 36705 11194 GVMRIFGG True NCI_RA007_Epitope_Rep5 835.4374435851098 835.43634993586 49.693 2 -2.1806603333653496 0.4523878654923595 1.0 ['nc|ENSG00000007402|Q9NY47-4|CACNA2D2', 'ENSG00000007402|ENST00000424201|CACNA2D2', 'nc|ENSG00000007402|Q9NY47-3|CACNA2D2', 'nc|ENSG00000007402|Q9NY47|CACNA2D2', 'nc|ENSG00000007402|Q9NY47-5|CACNA2D2', 'ENST00000487413.1_1_3:50453473-50541058:-|nuORF'] 133141 25009 WCSVRDNHL True NCI_RA007_Epitope_Rep3 1128.51346205968 1128.51181490379 108.11 3 -2.1807157009805866 0.4523937543014453 1.0 ['nc|ENSG00000169129|Q8N4X5-2|AFAP1L2', 'ENSG00000169129|ENST00000304129|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-4|AFAP1L2'] 67780 21685 LTHITLEI True PC9_epitope_Rep2 938.54368247546 938.54258993586 88.888 2 -2.180941645983825 0.45241628492160785 1.0 ['ENSG00000197147|ENST00000330947|LRRC8B'] 21324 13436 ERKYYYYERHR True H1975_Epitope_Rep3 1661.80627293309 1661.80516993586 56.952 2 -2.181050798939361 0.45241628492160785 1.0 ['TOPORS|p.G873Vfs*29|1|0.11|ENSG00000197579|chr9:32541889-32541907|GTTGTATCAGTAGCTTTTC/-|frameshift_variant', 'nc|ENSG00000197579|Q9NS56-2|TOPORS', 'ENSG00000197579|ENST00000360538|TOPORS'] 120552 13532 VGAASGHP True H1975_Epitope_Rep3 694.33983771882 694.3392849679301 57.33 1 -2.1816577117859994 0.45245545555232963 1.0 ['ENST00000466883.5_1_7:65439809-65440058:-|nuORF'] 67712 4367 LTGHLCAP True NCI_RA007_Epitope_Rep3 810.40580910366 810.40470993586 23.944 2 -2.1818743167874013 0.45245545555232963 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 83282 20497 QAFLLEIIVK True PC9_epitope_Rep2 1172.71689581016 1172.7157899358601 84.272 2 -2.1818822742097344 0.45245545555232963 1.0 ['ENSG00000169902|ENST00000304842|TPST1'] 121363 17491 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 76.743 2 -2.182059383868865 0.45246134325469367 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 37099 8968 GVSPEHLEQL True H1975_Epitope_Rep2 1107.5560380643099 1107.5549499358601 39.449 2 -2.182101131487766 0.45246236559139785 1.0 ['nc|ENSG00000140326|Q8IWY9-1|CDAN1', 'ENSG00000140326|ENST00000356231|CDAN1'] 103097 18902 SQLKQWKHF True NCI_RA007_Epitope_Rep4 1200.64037682496 1200.63926993586 81.732 2 -2.18229323637927 0.45246236559139785 1.0 ['ENSG00000197275|ENST00000336148|RAD54B'] 121541 11052 VGKNEKTK True PC9_epitope_Rep5 902.5185303567799 902.51798496793 47.498 1 -2.182931005953587 0.4525074190357404 1.0 ['ENSG00000159079|ENST00000290155|CFAP298', 'ENST00000483315.1_1_21:33975401-33976611:-|nuORF'] 118400 21665 VDLLGIRLHW True PC9_epitope_Rep6 1220.70297708152 1220.7018899358602 96.218 2 -2.1831430018444875 0.4525074190357404 1.0 ['ENSG00000132681|ENST00000368081|ATP1A4', 'ENST00000418334.5_1_1:160144048-160152563:+|nuORF', 'ENST00000466526.1_1_1:160147295-160152563:+|nuORF', 'nc|ENSG00000132681|Q13733-2|ATP1A4'] 78019 23367 PALLVLLFC True PC9_epitope_Rep3 987.5827108364699 987.58160993586 95.161 2 -2.183403162985364 0.4525074190357404 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.G241Efs*36|1|0.52|ENSG00000126259|chr19:35860343-35860343|G/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 94087 9256 RVWEFYHYRRE True NCI_RA007_Epitope_Rep1 1639.8007936298297 1639.7996899358602 40.001 2 -2.1834419461656043 0.4525074190357404 1.0 ['nc|ENSG00000124523|Q9NXA8-3|SIRT5', 'nc|ENSG00000124523|Q9NXA8-2|SIRT5', 'ENSG00000124523|ENST00000606117|SIRT5'] 52129 24554 KLTEILELLV True PC9_epitope_Rep4 1169.72712614069 1169.7260299358602 102.93 2 -2.1834969670426787 0.45251330573625076 1.0 ['ENSG00000125633|ENST00000376300|CCDC93'] 69179 25054 LVLVNYPFI True PC9_epitope_Rep3 1076.6270181766001 1076.62592993586 101.72 2 -2.1837738755566534 0.45252507875751286 1.0 ['ENSG00000105722|ENST00000222329|ERF', 'nc|ENSG00000105722|P50548-2|ERF'] 4835 24234 ALFAAFWFRI True PC9_epitope_Rep4 1240.6756997045197 1240.6746099358602 101.7 2 -2.18387987880092 0.45252507875751286 1.0 ['ENSG00000172197|ENST00000324607|MBOAT1', 'MBOAT1|p.F112Lfs*2|1|0.14|ENSG00000172197|chr6:20144303-20144303|A/-|frameshift_variant', 'nc|ENSG00000172197|Q6ZNC8-3|MBOAT1'] 79434 9524 PGPHGPNG True PC9_epitope_Rep3 731.33508669155 731.33453496793 41.581 1 -2.1844475959472662 0.45255654941085405 1.0 ['ENSG00000204262|ENST00000374866|COL5A2'] 110862 15703 TLAARPQSK True PC9_epitope_Rep1 970.55597849466 970.55488993586 65.224 2 -2.184484744543869 0.45255654941085405 1.0 ['nc|ENSG00000066032|P26232-3|CTNNA2', 'nc|ENSG00000066032|P26232-2|CTNNA2', 'nc|ENSG00000066032|P26232-5|CTNNA2', 'ENSG00000066032|ENST00000402739|CTNNA2', 'nc|ENSG00000066032|P26232-4|CTNNA2', 'nc|ENSG00000066032|P26232-6|CTNNA2', 'MRPL35-CTNNA2|2|fusion', 'MRPL35-CTNNA2|1|fusion'] 69044 13060 LVIDNVTRFDS True PC9_epitope_Rep4 1277.66156576201 1277.6604699358602 58.129 2 -2.184951285541346 0.45255654941085405 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 114110 19757 TRRRRFSRTV True NCI_RA007_Epitope_Rep5 1333.7803329687697 1333.77922993586 82.906 2 -2.184991831705887 0.45255654941085405 1.0 ['ENSG00000145526|ENST00000382275|CDH18', 'CDH18|p.L550V|1|0.53|ENSG00000145526|chr5:19483535-19483535|G/C|missense_variant'] 121979 9851 VGQAGGKA True H1975_Epitope_Rep3 686.3711378470999 686.3705849679301 42.921 1 -2.1850428249492433 0.45255654941085405 1.0 ['nc|ENSG00000132199|Q7L5Y1-3|ENOSF1', 'ENST00000251101.11_1_18:691232-697243:-|nuORF'] 52469 24492 KPKLLPLLMLW True PC9_epitope_Rep4 1350.8461361578998 1350.84502993586 102.69 2 -2.1852255748410605 0.45255654941085405 1.0 ['ENST00000473989.7_2_7:138968337-138968418:+|nuORF'] 87550 16282 QTKREVPK True NCI_RA007_Epitope_Rep3 984.5716285587998 984.57052993586 71.743 2 -2.185245042870932 0.45255654941085405 1.0 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC', 'APC|p.T1556Nfs*3|1|0.28|ENSG00000134982|chr5:112840254-112840255|-/A|frameshift_variant'] 112552 22898 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 95.298 2 -2.1853390408646396 0.45255654941085405 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 111973 19498 TLSGVHKAKF True PC9_epitope_Rep1 1086.61857875122 1086.61807496793 79.818 1 -2.185350169380933 0.45255654941085405 1.0 ['ENST00000482941.1_1_7:33169401-33192318:+|nuORF', 'ENST00000242067.10_1_7:33169401-33192318:+|nuORF'] 131716 8436 VWVDWEWRFDH True H1975_Epitope_Rep1 1573.7102472899296 1573.70914993586 37.375 2 -2.1856374328267476 0.45257318554672804 1.0 ['ENST00000602772.5_1_X:73289164-73289383:+|nuORF'] 127944 23198 VRPPPRGA True H1975_Epitope_Rep3 848.4980696957199 848.49696993586 96.869 2 -2.1862593884304538 0.45260747573128646 1.0 ['ENST00000373511.6_1_9:128200812-128200935:-|nuORF'] 17125 10865 EGTDARDRRAW True PC9_epitope_Rep1 1331.63305959839 1331.63196993586 46.679 2 -2.1862636610840376 0.45260747573128646 1.0 ['ENST00000291294.6_1_19:47127418-47128351:-|nuORF'] 78946 10190 PFGGGGAA True NCI_RA007_Epitope_Rep3 632.29182489724 632.29127496793 47.166 1 -2.186512012588267 0.45260747573128646 1.0 ['ENSG00000205903|ENST00000382252|ZNF316'] 82955 12740 PWSQVLPVR True PC9_epitope_Rep6 1080.60801406752 1080.6069099358601 60.491 2 -2.1866467914716443 0.45260747573128646 1.0 ['ENST00000322313.8_1_2:128458821-128459556:-|nuORF'] 114788 24942 TTASATRR True H1975_Epitope_Rep2 862.46207810982 862.46098993586 102.51 2 -2.186732160445694 0.45260849467336034 1.0 ['chr19:57435593-57518081|321|13.18|0.0|20.33|+|2|TE_info:LTR3B,LTR3B_dup78,ERVK,LTR,acceptor,+,57518081,57518488|ZNF749,None|3'] 39344 19639 HLTDEPPL True PC9_epitope_Rep2 920.46034677432 920.45924993586 80.926 2 -2.187009297839253 0.45260849467336034 1.0 ['ENST00000483873.6_1_9:135545612-135545816:+|nuORF'] 75167 8192 NNLETFIFIL True H1975_Epitope_Rep3 1222.65977485686 1222.6586699358602 36.49 2 -2.187654919537568 0.4526466288269694 1.0 ['ENSG00000105726|ENST00000357324|ATP13A1', 'nc|ENSG00000105726|Q9HD20-2|ATP13A1', 'ENST00000473243.5_1_19:19766211-19767540:-|nuORF'] 133580 18908 WIFFIMVFV True NCI_RA007_Epitope_Rep5 1200.64056006576 1200.63892490379 79.571 3 -2.187867041175352 0.4526476468944166 1.0 ['ENSG00000174343|ENST00000310169|CHRNA9'] 88809 24586 RDRLKLGKP True PC9_epitope_Rep4 1081.6720113064098 1081.6709099358602 103.06 2 -2.187878695037091 0.4526476468944166 1.0 ['ENSG00000128052|ENST00000263923|KDR'] 129814 6735 VTLDTPMNR True PC9_epitope_Rep3 1045.52262976105 1045.5215299358601 30.929 2 -2.188288359051937 0.4526496828979899 1.0 ['nc|ENSG00000151552|P09417-2|QDPR', 'ENSG00000151552|ENST00000281243|QDPR', 'ENST00000505710.1_2_4:17492283-17503442:-|nuORF', 'ENST00000511609.1_1_4:17492283-17494024:-|nuORF', 'ENST00000513615.5_1_4:17462419-17503442:-|nuORF', 'ENST00000501943.6_1_4:17488756-17494024:-|nuORF'] 27385 23349 FMVTESLM True H1975_Epitope_Rep2 956.43472627344 956.43362993586 96.279 2 -2.1883281965163013 0.4526496828979899 1.0 ['ENST00000470674.1_1_2:15767207-15768581:+|nuORF'] 88497 15071 RAAKTVAH True NCI_RA007_Epitope_Rep3 852.49298431528 852.49188993586 66.763 2 -2.1883524751550314 0.4526496828979899 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 63350 10916 LPENDERP True PC9_epitope_Rep2 968.4563240230399 968.45522993586 47.311 2 -2.188355178650602 0.4526496828979899 1.0 ['ENSG00000169291|ENST00000304760|SHE'] 110765 18809 TKKTTTDLKK True NCI_RA007_Epitope_Rep5 1162.6921376142998 1162.69104993586 79.193 2 -2.1886239318865326 0.4526555664240952 1.0 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 18349 21974 EIWKFSTYL True PC9_epitope_Rep6 1185.60701100801 1185.6053549037902 97.442 3 -2.1891108557217187 0.45267321624352386 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'SH3TC2|p.Q788Sfs*21|1|0.41|ENSG00000169247|chr5:149027371-149027371|C/-|frameshift_variant'] 48270 26281 KDKLLRLKL True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 106.89 3 -2.1893188330563556 0.45267321624352386 1.0 ['FKBP15|p.G1133Vfs*45|2|0.29|ENSG00000119321|chr9:113169311-113169311|C/-|frameshift_variant', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-3|FKBP15'] 98139 10616 SICHRPGP True PC9_epitope_Rep2 865.42285615013 865.42174993586 46.149 2 -2.189492682149178 0.45267321624352386 1.0 ['ENST00000366959.4_1_1:213447250-213447538:+|nuORF'] 71235 12304 MFVLEQEEYQR True NCI_RA007_Epitope_Rep1 1470.68131523042 1470.68077496793 51.831 1 -2.1898187064330807 0.4526849821574444 1.0 ['nc|ENSG00000105357|Q7Z406|MYH14', 'nc|ENSG00000105357|Q7Z406-6|MYH14', 'ENSG00000105357|ENST00000642316|MYH14', 'nc|ENSG00000105357|Q7Z406-4|MYH14', 'nc|ENSG00000105357|Q7Z406-5|MYH14'] 110761 18516 TKKTTTDLKK True NCI_RA007_Epitope_Rep3 1162.6921376142998 1162.69104993586 81.025 2 -2.189834742730837 0.4526849821574444 1.0 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 85634 24386 QLPQHPLT True PC9_epitope_Rep4 932.50796567308 932.50686993586 102.28 2 -2.1903249694684743 0.4527123617485517 1.0 ['ENSG00000127124|ENST00000372583|HIVEP3', 'nc|ENSG00000127124|Q5T1R4-2|HIVEP3'] 128426 21818 VSEGAPVI True NCI_RA007_Epitope_Rep4 770.41741933318 770.41632993586 94.583 2 -2.1904863605574416 0.45272899245469594 1.0 ['nc|ENSG00000063176|Q9NRA0-4|SPHK2', 'nc|ENSG00000063176|Q9NRA0-3|SPHK2', 'nc|ENSG00000063176|Q9NRA0-2|SPHK2', 'ENSG00000063176|ENST00000245222|SPHK2', 'nc|ENSG00000063176|Q9NRA0-5|SPHK2'] 97106 10583 SFCWKRKREWW True NCI_RA007_Epitope_Rep1 1610.7928717984198 1610.79121490379 45.151 3 -2.1906788160382606 0.4527456228033405 1.0 ['ENSG00000230358|ENST00000424157|SPDYE21', 'nc|ENSG00000205482|P0DV79|SPDYE18', 'ENSG00000185040|ENST00000633306|SPDYE16'] 114569 23330 TSKPKDVD True PC9_epitope_Rep4 888.4552613938798 888.45416993586 97.998 2 -2.191004672294307 0.452762252794497 1.0 ['CLIP4|p.A344Hfs*6|1|0.23|ENSG00000115295|chr2:29152693-29152693|G/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 27078 6936 FLPPAPAA True NCI_RA007_Epitope_Rep4 782.4326754744999 782.43156993586 33.303 2 -2.1912453523642115 0.452769149747966 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 32459 21198 GGHGRGAR True PC9_epitope_Rep1 766.3946672563399 766.39356993586 86.369 2 -2.1912604818388695 0.452769149747966 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 86937 15183 QRSHTKEKPYK True NCI_RA007_Epitope_Rep2 1400.75244645508 1400.7513499358602 63.75 2 -2.1914018312386387 0.452769149747966 1.0 ['ENSG00000197937|ENST00000334197|ZNF347', 'nc|ENSG00000197937|Q96SE7-2|ZNF347'] 120791 4252 VGCWGRLMFG True H1975_Epitope_Rep2 1124.5259413196798 1124.5243049037902 21.465 3 -2.191753585567749 0.45278577877133397 1.0 ['ENST00000553264.5_1_14:104177886-104178036:-|nuORF'] 2976 20320 AFLAWRSS True PC9_epitope_Rep6 936.48175092524 936.48064993586 90.866 2 -2.1918867307673677 0.4527916599494868 1.0 ['ENST00000340621.9_1_17:16593620-16593701:+|nuORF'] 80014 26022 PKGFVGLK True NCI_RA007_Epitope_Rep5 844.5170738047999 844.5165249679301 107.66 1 -2.1922738042894085 0.4527975410012252 1.0 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant', 'nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'ENSG00000114374|ENST00000338981|USP9Y'] 33152 23424 GKPSTRNVL True PC9_epitope_Rep2 970.5559784946599 970.55488993586 95.573 2 -2.192679779164817 0.4528464109536041 1.0 ['chr4:99005836-99028867|190|13.35|0.83|4.0|+|1|TE_info:L1PB3,L1PB3_dup814,L1,LINE,donor,+,99005121,99005836|None,METAP1|12'] 10457 25198 CMGRGSGK True PC9_epitope_Rep2 794.3527279849799 794.3521749679301 102.59 1 -2.193094155175628 0.452884532714298 1.0 ['ENST00000472073.1_1_22:19131751-19131850:-|nuORF'] 91215 23129 RLRLRKERVSD True PC9_epitope_Rep4 1426.84807817542 1426.84642490379 97.184 3 -2.1932959291583205 0.4528962923159592 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 71247 17412 MGDTSVVT True NCI_RA007_Epitope_Rep5 808.36366950816 808.36256993586 73.758 2 -2.1933602750195007 0.4528962923159592 1.0 ['MUC16|p.L7809V|1|0.15|ENSG00000181143|chr19:8953345-8953345|G/C|missense_variant'] 100011 15393 SLKAANAA True NCI_RA007_Epitope_Rep1 744.41300265908 744.4124549679301 63.953 1 -2.193650410693478 0.45290520863556744 1.0 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 71281 20747 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 86.776 2 -2.193805357729744 0.45290520863556744 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 60973 21989 LLAFAKNL True NCI_RA007_Epitope_Rep4 888.54328855264 888.54218993586 95.353 2 -2.1939610036002497 0.45290520863556744 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 104152 21140 SSAKKKGG True PC9_epitope_Rep2 761.4395517600899 761.43844993586 86.769 2 -2.1940873398671017 0.45290520863556744 1.0 ['nc|ENSG00000144048|O75319-1|DUSP11', 'ENSG00000144048|ENST00000272444|DUSP11', 'nc|ENSG00000144048|O75319-2|DUSP11'] 83477 9079 QDGDVIAPLI True H1975_Epitope_Rep1 1039.5549754351498 1039.5538699358601 39.828 2 -2.194342691170033 0.45290520863556744 1.0 ['ENSG00000101347|ENST00000646673|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1', 'nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1'] 132800 17080 VYSRANDQEP True PC9_epitope_Rep2 1177.53636524889 1177.53526993586 70.949 2 -2.1943671969179004 0.45290520863556744 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'ENST00000479176.5_1_3:180630473-180665760:+|nuORF', 'FXR1|p.N124Kfs*5|1|0.21|ENSG00000114416|chr3:180948439-180948440|-/A|frameshift_variant'] 95621 16998 SATVKVQG True NCI_RA007_Epitope_Rep4 788.4392174069199 788.43812993586 73.661 2 -2.1943943362560105 0.45290520863556744 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN', 'nc|ENSG00000160145|O60229|KALRN'] 69289 2954 LVPFDGPG True NCI_RA007_Epitope_Rep2 800.4068546494799 800.40574993586 15.979 2 -2.194720190511674 0.4529110877087408 1.0 ['ENSG00000118482|ENST00000262043|PHF3', 'nc|ENSG00000118482|Q92576-2|PHF3'] 112324 23048 TMKRWLKL True PC9_epitope_Rep3 1074.6372060208198 1074.63610993586 93.921 2 -2.1951063746635766 0.45292588055788363 1.0 ['ENST00000556124.3_1_14:20915875-20915929:-|nuORF'] 93059 19022 RRRKKRRREEE True H1975_Epitope_Rep1 1597.93493611721 1597.93382993586 79.298 2 -2.1951805029267466 0.45292588055788363 1.0 ['ENST00000235307.6_1_1:184356289-184446531:+|nuORF'] 97741 17818 SHGFWLKRSSY True H1975_Epitope_Rep1 1366.6782188856598 1366.6771299358602 74.196 2 -2.1953839693377755 0.45292588055788363 1.0 ['ENSG00000205084|ENST00000258173|TMEM231', 'ENST00000564576.1_1_16:75575341-75590122:-|nuORF'] 24619 27078 FAQFKSFL True PC9_epitope_Rep3 986.5225531080599 986.52144993586 111.4 2 -2.19564809263231 0.45292588055788363 1.0 ['ENSG00000127511|ENST00000248054|SIN3B', 'nc|ENSG00000127511|O75182|SIN3B'] 108857 9850 TERIEETMSV True H1975_Epitope_Rep3 1193.55980311541 1193.5587099358602 42.917 2 -2.196000470436631 0.45292588055788363 1.0 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant'] 12475 24394 DKTSEQQENF True NCI_RA007_Epitope_Rep2 1224.5258601348398 1224.5242049037902 102.45 3 -2.196286481982324 0.45292588055788363 1.0 ['ANK3|p.L1342S|1|0.22|ENSG00000151150|chr10:60084651-60084651|A/G|missense_variant'] 106673 22118 SYAFHTPD True NCI_RA007_Epitope_Rep5 936.39774651776 936.39664993586 92.21 2 -2.19640371901407 0.45292588055788363 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000416281.6_1_11:67048455-67049666:+|nuORF'] 36063 5042 GVDWLQDQI True PC9_epitope_Rep2 1072.5189242796 1072.5178299358602 24.763 2 -2.19654792194084 0.45292588055788363 1.0 ['ENSG00000113966|ENST00000463745|ARL6'] 98948 21313 SKACHLRT True PC9_epitope_Rep5 914.47561999898 914.47452993586 87.034 2 -2.196940099548428 0.4529337817365237 1.0 ['ENSG00000283039|ENST00000634670|KLF18'] 23846 23287 EYLRQRQEL True PC9_epitope_Rep4 1233.6465844042098 1233.64492490379 97.827 3 -2.1969698365125567 0.4529337817365237 1.0 ['DACT1|p.Q592Rfs*100|1|0.75|ENSG00000165617|chr14:58646398-58646398|A/-|frameshift_variant', 'DACT1|p.W784Lfs*30|1|0.3|ENSG00000165617|chr14:58646970-58646971|-/T|frameshift_variant', 'DACT1|p.K821Rfs*10|1|0.16|ENSG00000165617|chr14:58647083-58647083|G/-|frameshift_variant', 'ENSG00000165617|ENST00000395153|DACT1', 'nc|ENSG00000165617|Q9NYF0|DACT1'] 26564 9720 FIWRRMKTMWF True H1975_Epitope_Rep1 1600.8159157421198 1600.81480993586 42.316 2 -2.196990210970214 0.4529337817365237 1.0 ['ENST00000442563.5_2_7:66235310-66235424:+|nuORF'] 53786 19662 KYFLFLFNLI True NCI_RA007_Epitope_Rep5 1316.7532813188798 1316.75218993586 82.543 2 -2.197010666326254 0.4529337817365237 1.0 ['ENST00000529853.1_1_11:44609006-44616389:+|nuORF', 'ENST00000525898.5_1_11:44609042-44626792:+|nuORF', 'nc|ENSG00000085117|P27701-2|CD82', 'ENSG00000085117|ENST00000227155|CD82'] 74706 25044 NLKLKKPP True H1975_Epitope_Rep2 936.6120368188 936.61092993586 102.91 2 -2.19707419020774 0.4529337817365237 1.0 ['ENST00000593607.1_1_19:54120057-54120405:+|nuORF', 'ENST00000510556.1_1_4:109571811-109578607:+|nuORF', 'ENST00000424397.2_1_4:113606219-113606393:+|nuORF', 'ENSG00000198856|ENST00000361564|OSTC', 'nc|ENSG00000198856|Q9NRP0-2|OSTC'] 16978 12817 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 55.983 2 -2.1973379881792714 0.4529514150031158 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 60479 24068 LILYHAIFVF True PC9_epitope_Rep2 1234.7114165069 1234.70977490379 98.08 3 -2.1974298486379236 0.4529514150031158 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 32164 23981 GFCPAVLC True NCI_RA007_Epitope_Rep5 808.3611674103599 808.36006993586 99.622 2 -2.197540421658786 0.4529514150031158 1.0 ['nc|ENSG00000196136|P01011-3|SERPINA3', 'nc|ENSG00000196136|P01011-2|SERPINA3', 'ENSG00000196136|ENST00000393078|SERPINA3'] 52685 10835 KQGTFHSQQAL True PC9_epitope_Rep4 1243.63093434007 1243.62982993586 49.437 2 -2.1977157460708283 0.4529572925060435 1.0 ['ENST00000430989.1_1_2:84670392-84686354:-|nuORF', 'ENSG00000163541|ENST00000393868|SUCLG1'] 80023 23756 PKGHGGAR True PC9_epitope_Rep2 778.41981937502 778.41872993586 96.85 2 -2.1980747859973726 0.45296316988267654 1.0 ['ENST00000427323.5_1_3:38388271-38390057:+|nuORF'] 112537 20550 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 85.134 2 -2.1985534859325435 0.4529905347185664 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 10180 11267 CCHQLLLI True PC9_epitope_Rep5 941.4826795253699 941.48158993586 48.331 2 -2.198802111865199 0.4530091747061731 1.0 ['ENSG00000177108|ENST00000319374|ZDHHC22'] 90596 25097 RKILLAYF True PC9_epitope_Rep5 1022.6276868829399 1022.6265899358599 101.68 2 -2.198816441746148 0.4530091747061731 1.0 ['chr3:119173638-119187775|271|26.94|0.21|7.04|+|ENST00000497685|UPK1B,UPK1B', 'chr3:119173638-119186679|214|13.77|0.12|6.86|+|ENST00000494855|UPK1B,UPK1B', 'chr3:119190319-119191006|253|13.0|0.2|6.03|+|ENST00000460625|UPK1B,UPK1B', 'ENSG00000114638|ENST00000264234|UPK1B', 'chr3:119176109-119186714|293|40.76|0.71|5.84|+|ENST00000479520|UPK1B,UPK1B', 'chr3:119173638-119175998|287|45.64|0.61|6.22|+|ENST00000479520|UPK1B,UPK1B'] 67717 4859 LTGHLCAP True PC9_epitope_Rep2 810.40580910366 810.40470993586 24.059 2 -2.1988538496991215 0.4530091747061731 1.0 ['ENST00000469356.3_1_17:17720899-17721766:-|nuORF'] 71273 11044 MGVLFGGR True NCI_RA007_Epitope_Rep4 835.4374435851098 835.43634993586 49.353 2 -2.198866235979535 0.4530091747061731 1.0 ['ENSG00000175097|ENST00000311485|RAG2'] 13652 5737 DPWVLEGQE True PC9_epitope_Rep1 1071.4872897981497 1071.48618993586 26.885 2 -2.199006644721432 0.4530091747061731 1.0 ['ENST00000529721.5_1_11:75201353-75201711:-|nuORF'] 6905 18356 AQKLSEIHK True NCI_RA007_Epitope_Rep1 1052.59784330664 1052.59674993586 75.536 2 -2.199323043601363 0.45302579418368555 1.0 ['ENSG00000174607|ENST00000310836|UGT8'] 63655 11501 LPPAQILGI True PC9_epitope_Rep6 920.5695033004799 920.56840993586 55.316 2 -2.1997824109346436 0.4530316703192815 1.0 ['ENSG00000007545|ENST00000397412|CRAMP1'] 31133 3655 GCQHLLAH True PC9_epitope_Rep5 877.42285615013 877.42174993586 19.147 2 -2.200174453020823 0.45303754632862436 1.0 ['ENST00000266643.5_1_12:58150815-58152358:+|nuORF'] 44007 20594 ILHYDETY True NCI_RA007_Epitope_Rep5 1052.4814761417201 1052.4803699358602 86.157 2 -2.2003142131094786 0.4530385553299601 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 53635 26286 KWMVAPAA True H1975_Epitope_Rep1 872.4578446765198 872.45674993586 109.2 2 -2.200410873742036 0.4530385553299601 1.0 ['ENST00000488281.1_1_14:47669981-47670080:-|nuORF'] 61315 22724 LLEAQHDP True PC9_epitope_Rep1 921.45559574705 921.45504496793 92.212 1 -2.2008043594172166 0.45305517359917497 1.0 ['CD276|p.D84Pfs*82|1|0.1|ENSG00000103855|chr15:73702420-73702442|GCCAGGACCAGGGCAGCGCCTAT/-|frameshift_variant'] 21043 20080 ERDFNAPSL True PC9_epitope_Rep2 1047.49852318819 1047.49742993586 82.645 2 -2.2011286767364178 0.4530561821892792 1.0 ['FIZ1|p.A241S|1|0.24|ENSG00000179943|chr19:55593220-55593220|C/A|missense_variant'] 70687 10232 MDKDGYFWFVA True PC9_epitope_Rep6 1377.60635938501 1377.6052699358602 50.014 2 -2.2011318147502275 0.4530561821892792 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 33127 21342 GKPHGRGV True PC9_epitope_Rep3 806.4511195033 806.45002993586 87.389 2 -2.201315077532176 0.4530620575565844 1.0 ['ENSG00000003393|ENST00000264276|ALS2', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF'] 29014 19360 FTKEDALK True PC9_epitope_Rep2 950.5072969667398 950.5067449679301 79.844 1 -2.2014603007913975 0.453078674859279 1.0 ['nc|ENSG00000110435|O00330-3|PDHX', 'ENSG00000110435|ENST00000227868|PDHX'] 121366 21139 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 91.936 2 -2.201905957656755 0.45309042473199135 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 3288 18879 AGGGHPNK True PC9_epitope_Rep4 736.36163579256 736.3610849679301 80.705 1 -2.202055864264132 0.45309042473199135 1.0 ['ENST00000490362.1_1_2:217498183-217525611:+|nuORF'] 110719 12754 TKEKYRVV True NCI_RA007_Epitope_Rep1 1021.5920296502097 1021.59092993586 53.596 2 -2.202347622046322 0.4531021740998539 1.0 ['ENSG00000131264|ENST00000373514|CDX4'] 123600 19112 VIKKQHRKST True NCI_RA007_Epitope_Rep5 1223.7462388758297 1223.7451499358601 80.385 2 -2.2024755072447135 0.4531021740998539 1.0 ['SETX|p.V2056Ffs*2|1|0.35|ENSG00000107290|chr9:132288592-132288592|C/-|frameshift_variant', 'nc|ENSG00000107290|Q7Z333-3|SETX', 'ENSG00000107290|ENST00000224140|SETX', 'nc|ENSG00000107290|Q7Z333-4|SETX'] 77729 23772 PAALLGWRRRL True NCI_RA007_Epitope_Rep1 1307.79385777459 1307.7927699358602 98.228 2 -2.202660474004651 0.45313540570151883 1.0 ['ENST00000579727.5_1_17:38498669-38498957:+|nuORF', 'ENST00000394081.7_1_17:38498669-38498969:+|nuORF'] 351 7800 AAKGTQVV True NCI_RA007_Epitope_Rep5 772.4443027873599 772.44320993586 36.705 2 -2.202684607081413 0.45313540570151883 1.0 ['ENSG00000136542|ENST00000259056|GALNT5', 'GALNT5|p.S200Rfs*8|1|0.12|ENSG00000136542|chr2:157258681-157258697|GTCATAGTCCCAGCAGT/-|frameshift_variant'] 52103 19140 KLPCMKVS True NCI_RA007_Epitope_Rep2 904.48743055264 904.48632993586 79.316 2 -2.2029617877315104 0.4531471535982814 1.0 ['ENST00000370520.3_1_20:61273322-61274596:-|nuORF'] 77783 8655 PADPGPASP True PC9_epitope_Rep5 807.37628279719 807.37518993586 38.235 2 -2.202999239252264 0.4531471535982814 1.0 ['ENSG00000103154|ENST00000305202|NECAB2'] 110760 18090 TKKTTTDLKK True NCI_RA007_Epitope_Rep3 1162.6921376142998 1162.69104993586 79.274 2 -2.2031830051735524 0.45315302735738605 1.0 ['ENSG00000118412|ENST00000551025|CASP8AP2', 'ENST00000237177.10_1_6:90556308-90583533:+|nuORF', 'nc|ENSG00000118412|Q9UKL3|CASP8AP2'] 93929 24916 RVLARYPG True PC9_epitope_Rep2 930.5399345076999 930.53882993586 101.5 2 -2.203359559475825 0.45317265970700693 1.0 ['ENST00000369583.3_1_10:112270861-112271212:+|nuORF'] 112539 21337 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 88.29 2 -2.20344341315046 0.45317265970700693 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 122189 15232 VGRLLQQLAM True PC9_epitope_Rep4 1127.64849898051 1127.6474099358602 66.519 2 -2.2036541835001318 0.45317265970700693 1.0 ['nc|ENSG00000165219|Q14C86-3|GAPVD1', 'nc|ENSG00000165219|Q14C86-4|GAPVD1', 'nc|ENSG00000165219|Q14C86-5|GAPVD1', 'ENSG00000165219|ENST00000297933|GAPVD1', 'nc|ENSG00000165219|Q14C86|GAPVD1', 'nc|ENSG00000165219|Q14C86-6|GAPVD1'] 79993 25013 PKARGGCP True NCI_RA007_Epitope_Rep4 784.4013924295599 784.40028993586 108.89 2 -2.2037037178424224 0.45317265970700693 1.0 ['ENST00000485732.5_1_9:139747929-139748217:+|nuORF'] 29895 22587 FWARYHQN True H1975_Epitope_Rep1 1120.52026169228 1120.5191699358602 93.941 2 -2.2038730473396124 0.45317265970700693 1.0 ['MAGED1|p.V777Gfs*2|1|0.15|ENSG00000179222|chrX:51901919-51901920|-/G|frameshift_variant', 'ENSG00000179222|ENST00000326587|MAGED1', 'nc|ENSG00000179222|Q9Y5V3-2|MAGED1', 'ENST00000494718.5_1_X:51643260-51645023:+|nuORF'] 39330 22287 HLSHGKRD True PC9_epitope_Rep6 948.488961564 948.48786993586 98.699 2 -2.2039425603456895 0.45317265970700693 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|40|1|sense'] 24786 17828 FCCSKELH True NCI_RA007_Epitope_Rep2 965.4099085079299 965.40880993586 74.087 2 -2.2041476294446714 0.45317265970700693 1.0 ['ENST00000380527.2_1_9:19050237-19050378:+|nuORF'] 62762 25288 LMCSVPGY True PC9_epitope_Rep2 868.3822967777598 868.38118993586 102.94 2 -2.2043210118085663 0.4531736655568682 1.0 ['ENSG00000197102|ENST00000360184|DYNC1H1'] 64792 20023 LRVKHLMLLHY True NCI_RA007_Epitope_Rep4 1421.83294570525 1421.83129490379 86.591 3 -2.204670506399515 0.4531736655568682 1.0 ['ENSG00000196329|ENST00000358647|GIMAP5', 'nc|ENSG00000196329|Q96F15-2|GIMAP5'] 87210 19894 QSNHHCHA True NCI_RA007_Epitope_Rep5 932.36713217916 932.36602993586 83.435 2 -2.2048271459347273 0.4531746713635192 1.0 ['SLC30A2|p.K234Qfs*4|1|0.32|ENSG00000158014|chr1:26039903-26039904|-/G|frameshift_variant', 'nc|ENSG00000158014|Q9BRI3-1|SLC30A2', 'ENSG00000158014|ENST00000374276|SLC30A2'] 122916 18024 VGVSVLLA True H1975_Epitope_Rep1 756.4745402864799 756.47344993586 75.105 2 -2.2048427296475284 0.4531746713635192 1.0 ['ENSG00000218336|ENST00000511685|TENM3', 'TENM3|p.A314G|1|0.48|ENSG00000218336|chr4:182628842-182628842|C/G|missense_variant'] 33107 18662 GKKRHQNHRI True NCI_RA007_Epitope_Rep3 1272.72756911992 1272.72697496793 81.644 1 -2.205139214929589 0.45317567712696266 1.0 ['ENST00000593438.1_1_7:27155866-27156094:+|nuORF'] 33126 21466 GKPHGRGV True PC9_epitope_Rep1 806.4511195033 806.45002993586 87.411 2 -2.2051422941169605 0.45317567712696266 1.0 ['ENSG00000003393|ENST00000264276|ALS2', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF'] 71618 17157 MLLLKSLW True NCI_RA007_Epitope_Rep5 1002.59360987334 1002.5930749679301 72.765 1 -2.2051873049350736 0.45317668284720136 1.0 ['ENST00000445193.7_2_3:58303863-58303956:+|nuORF'] 97474 11196 SGKTTLMT True H1975_Epitope_Rep1 837.4266041178901 837.4260549679301 48.034 1 -2.205204691146778 0.45317668284720136 1.0 ['ENSG00000135720|ENST00000258198|DYNC1LI2', 'nc|ENSG00000135720|O43237-2|DYNC1LI2'] 120388 4794 VFSDIPTQ True PC9_epitope_Rep1 905.4494477374499 905.44834993586 23.31 2 -2.2053302523349703 0.45317768852423806 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7', 'nc|ENSG00000146205|Q6IWH7-3|ANO7'] 40546 25374 HSRQVLLLQ True PC9_epitope_Rep2 1092.64037682496 1092.63926993586 103.28 2 -2.2053486753871674 0.45317768852423806 1.0 ['ENSG00000139211|ENST00000550413|AMIGO2'] 71211 24538 MFRGSLYKR True H1975_Epitope_Rep3 1156.6175332053997 1156.6164299358602 102.12 2 -2.206197153156721 0.45319429976696485 1.0 ['nc|ENSG00000099956|Q12824-2|SMARCB1', 'ENSG00000099956|ENST00000644036|SMARCB1'] 29831 23859 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 98.284 2 -2.206644277340095 0.4532119155516419 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 59893 17902 LHHGPLCL True H1975_Epitope_Rep3 888.46399268612 888.46288993586 74.965 2 -2.206648303075202 0.4532119155516419 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 90935 24592 RLFFFLHF True PC9_epitope_Rep2 1125.61237117197 1125.61126993586 100.22 2 -2.2068884447527437 0.4532119155516419 1.0 ['ENST00000393467.1_1_7:116166483-116166657:+|nuORF'] 40949 21505 HWKGHEHS True H1975_Epitope_Rep2 1016.45766143572 1016.45656993586 88.977 2 -2.207051731093629 0.45321778722764516 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC'] 93601 25656 RSYKQKKK True PC9_epitope_Rep1 1064.6454622054 1064.6443699358601 103.72 2 -2.207571163266564 0.4532315390479872 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 93093 23606 RRRLNQLLLPL True NCI_RA007_Epitope_Rep4 1390.8884864354197 1390.88738993586 102.4 2 -2.2077414415010503 0.4532315390479872 1.0 ['ENSG00000089053|ENST00000261819|ANAPC5', 'ENST00000544442.5_1_12:121784793-121790143:-|nuORF', 'ENST00000545801.1_1_12:121785603-121790107:-|nuORF', 'ENST00000536416.5_1_12:121783870-121790143:-|nuORF'] 129707 25388 VTIVDLLVTV True PC9_epitope_Rep2 1070.6587122276999 1070.6576099358601 103.34 2 -2.2079505899867864 0.4532315390479872 1.0 ['ENSG00000179002|ENST00000375371|TAS1R2'] 112808 5325 TPLSAAAHTH True PC9_epitope_Rep4 1004.5039429218 1004.50284993586 27.198 2 -2.207966090710202 0.4532315390479872 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 13642 9408 DPVMSQCA True PC9_epitope_Rep1 849.3360748613298 849.33496993586 41.046 2 -2.2081445304047222 0.4532315390479872 1.0 ['nc|ENSG00000288520|G9CGD6-3|CNK3', 'nc|ENSG00000288520|G9CGD6|CNK3', 'nc|ENSG00000288520|G9CGD6-2|CNK3', 'ENSG00000153721|ENST00000607772|CNKSR3', 'ENST00000433165.6_1_6:154727490-154754936:-|nuORF', 'CNKSR3|p.E210G|1|0.24|ENSG00000153721|chr6:154430512-154430512|T/C|missense_variant'] 128431 8587 VSEGWPTLSV True H1975_Epitope_Rep3 1073.53932537101 1073.53822993586 38.021 2 -2.2081810869134246 0.4532315390479872 1.0 ['ENST00000333235.3_1_Y:27624438-27626982:+|nuORF'] 64783 9950 LRSWWPRWWWA True NCI_RA007_Epitope_Rep4 1628.8153214951599 1628.81368490379 45.116 3 -2.208596682913335 0.45323354772207486 1.0 ['ENST00000355943.7_1_5:110074744-110074849:+|nuORF'] 112316 17309 TMFKLGKY True NCI_RA007_Epitope_Rep5 986.5259242363397 986.52482993586 73.354 2 -2.208715933123985 0.45323354772207486 1.0 ['IGSF1|p.D1178Y|1|0.2|ENSG00000147255|chrX:131274818-131274818|C/A|missense_variant'] 80097 16857 PKGRKVLDD True NCI_RA007_Epitope_Rep3 1026.5821932424997 1026.58108993586 74.179 2 -2.20885399507397 0.45323354772207486 1.0 ['ENST00000590411.5_1_19:44496018-44500260:+|nuORF'] 20316 15920 EPEGGLKC True NCI_RA007_Epitope_Rep1 831.3796539254699 831.37854993586 66.024 2 -2.209189032275073 0.45323354772207486 1.0 ['ENSG00000174292|ENST00000688331|TNK1', 'nc|ENSG00000174292|Q13470|TNK1'] 32462 21123 GGHGRGAR True PC9_epitope_Rep5 766.3946672563399 766.39356993586 86.31 2 -2.20939857596412 0.4532345519944167 1.0 ['ENST00000164227.9_1_19:45252055-45254595:+|nuORF'] 88767 10800 RDHLHREQREY True H1975_Epitope_Rep2 1537.74982068613 1537.7487299358602 46.572 2 -2.209451284063424 0.4532345519944167 1.0 ['nc|ENSG00000168071|A6NC98-4|CCDC88B', 'ENSG00000168071|ENST00000356786|CCDC88B', 'ENST00000479965.5_1_11:64120415-64123189:+|nuORF', 'nc|ENSG00000168071|A6NC98-5|CCDC88B', 'ENST00000473405.1_1_11:64120912-64122720:+|nuORF'] 114541 21111 TSICGSLE True H1975_Epitope_Rep2 808.36366950816 808.36256993586 87.381 2 -2.2095676448245753 0.4532414267001654 1.0 ['ENST00000430785.1_1_2:131176620-131176755:-|nuORF', 'ENST00000325390.7_1_2:130785042-130785990:-|nuORF'] 99055 23894 SKVKMRFYK True PC9_epitope_Rep2 1185.6692344250898 1185.6681299358602 97.387 2 -2.209907934463928 0.4532414267001654 1.0 ['ENSG00000149201|ENST00000445632|CCDC81'] 82219 23644 PTHPSLLT True H1975_Epitope_Rep1 864.4705175352 864.46942993586 98.188 2 -2.2099621447867954 0.4532414267001654 1.0 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF'] 40283 25149 HRPHSREH True PC9_epitope_Rep1 1054.51690764734 1054.51580993586 101.62 2 -2.210274510524035 0.45325803369157924 1.0 ['ENSG00000143520|ENST00000388718|FLG2', 'CON__Q5D862'] 83897 10541 QEILKDKK True NCI_RA007_Epitope_Rep5 1000.5916952970399 1000.59058993586 47.179 2 -2.2105672298826597 0.4532590373734446 1.0 ['ENSG00000159307|ENST00000360835|SCUBE1', 'ENST00000518447.1_1_11:9042594-9043530:-|nuORF', 'ENST00000524317.1_1_11:9042594-9047435:-|nuORF', 'nc|ENSG00000175356|Q9NQ36-3|SCUBE2', 'nc|ENSG00000175356|Q9NQ36-2|SCUBE2', 'ENSG00000146197|ENST00000274938|SCUBE3', 'nc|ENSG00000175356|Q9NQ36|SCUBE2', 'nc|ENSG00000146197|Q8IX30-2|SCUBE3', 'ENSG00000175356|ENST00000649792|SCUBE2'] 127277 25495 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 103.32 2 -2.2106475667335284 0.4532590373734446 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 13426 23421 DNNNGWDS True NCI_RA007_Epitope_Rep4 920.32603812948 920.32494993586 101.66 2 -2.2110399014298743 0.4532756436408924 1.0 ['ENSG00000169605|ENST00000377938|GKN1'] 114694 22756 TSSKGKKGKK True PC9_epitope_Rep2 1047.6400424717897 1047.6389499358602 93.024 2 -2.2113046108117933 0.45331372191146946 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 121379 20911 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 87.431 2 -2.211972002571999 0.45334693220248 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 78817 10388 PEPGPGGL True NCI_RA007_Epitope_Rep5 722.35990445706 722.35935496793 46.585 1 -2.2119826280915342 0.45334693220248 1.0 ['ENSG00000182557|ENST00000355530|SPNS3'] 90997 20900 RLKAGHGG True PC9_epitope_Rep6 794.4511195032999 794.45002993586 93.164 2 -2.212137147986222 0.4533528009791081 1.0 ['ENST00000497891.1_1_7:143098260-143104736:-|nuORF'] 34184 23756 GPGHPAYA True H1975_Epitope_Rep2 768.35548778296 768.35438993586 97.878 2 -2.2122354495825043 0.45336453815433503 1.0 ['PLXDC2|p.S506P|2|0.08|ENSG00000120594|chr10:20279745-20279745|T/C|missense_variant'] 60390 25988 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 105.81 3 -2.212260959161948 0.45336453815433503 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 23298 17258 EVSGRIEPS True H1975_Epitope_Rep3 972.4876241513199 972.4870749679301 72.028 1 -2.2124488230235695 0.45338114204124574 1.0 ['nc|ENSG00000205592|Q7Z5P9-2|MUC19', 'ENSG00000205592|ENST00000454784|MUC19'] 89514 23805 REREGRLRA True PC9_epitope_Rep2 1141.64283643645 1141.6417299358602 97.036 2 -2.2126694808564706 0.45338214297216345 1.0 ['nc|ENSG00000152556|P08237-3|PFKM', 'nc|ENSG00000152556|P08237-2|PFKM', 'ENSG00000152556|ENST00000359794|PFKM', 'ENST00000546964.5_1_12:48513149-48528944:+|nuORF'] 10237 6876 CFIYLSKPGQW True PC9_epitope_Rep2 1340.6587293110397 1340.65762993586 31.85 2 -2.2127845757141644 0.45338214297216345 1.0 ['chr15:100402865-100417329|223|24.83|0.0|14.02|-|0|TE_info:L1PA2,L1PA2_dup4458,L1,LINE,donor,+,100417329,100423096|CERS3,None|126'] 100078 21228 SLKRQSAAVW True PC9_epitope_Rep4 1144.63529144452 1144.6341899358601 89.818 2 -2.213116192726265 0.45338314386010115 1.0 ['ENST00000528968.5_1_11:3000463-3009353:-|nuORF'] 248 10423 AAGGKSSP True H1975_Epitope_Rep1 673.33950336565 673.33895496793 45.045 1 -2.2132518570333315 0.45338314386010115 1.0 ['ENST00000475699.5_1_X:153649641-153649923:+|nuORF'] 112551 21386 TPAHHPPG True NCI_RA007_Epitope_Rep3 812.3929359208399 812.39182993586 92.946 2 -2.2134985456326453 0.45338414470506144 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 79208 22026 PGFPSGVH True PC9_epitope_Rep6 796.3867879112399 796.38568993586 97.651 2 -2.2135213172061428 0.45338414470506144 1.0 ['nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS', 'ENST00000464624.6_1_20:57428320-57466719:+|nuORF', 'nc|ENSG00000087460|Q5JWF2-3|GNAS'] 34025 20226 GNLFMILLIRT True NCI_RA007_Epitope_Rep2 1289.7529640490498 1289.7518699358602 83.705 2 -2.213929119380915 0.45339001245223065 1.0 ['OR5M1|p.C44F|1|0.83|ENSG00000255012|chr11:56613372-56613372|C/A|missense_variant'] 80054 22054 PKGKKDRE True PC9_epitope_Rep4 956.5403284305199 956.53922993586 93.051 2 -2.21398683002276 0.4533958800734244 1.0 ['nc|ENSG00000198363|Q12797-4|ASPH', 'nc|ENSG00000198363|Q12797-3|ASPH'] 35097 15298 GRQVCADP True NCI_RA007_Epitope_Rep5 844.3861362882399 844.38502993586 65.54 2 -2.214657762123993 0.45342321647094186 1.0 ['ENSG00000276085|ENST00000619989|CCL3L3'] 60978 24060 LLAFRWLDR True NCI_RA007_Epitope_Rep3 1188.6767623336798 1188.67566993586 104.2 2 -2.2158238254725284 0.4534886217260627 1.0 ['ENST00000339659.8_1_21:38792656-38845120:+|nuORF', 'ENST00000462274.1_1_21:38739279-38845117:+|nuORF'] 109339 4495 TGHPPGPT True PC9_epitope_Rep6 762.36605246666 762.36494993586 24.494 2 -2.2158681038253123 0.4534886217260627 1.0 ['nc|ENSG00000120049|Q9NS61-2|KCNIP2', 'ENSG00000120049|ENST00000356640|KCNIP2', 'nc|ENSG00000120049|Q9NS61-6|KCNIP2'] 101382 23015 SMTIKTGK True PC9_epitope_Rep6 864.47388866348 864.47278993586 101.63 2 -2.216655597453623 0.4535003542216784 1.0 ['ENST00000545247.6_1_11:18505612-18548363:-|nuORF', 'ENSG00000074319|ENST00000251968|TSG101', 'ENST00000543087.5_1_11:18512432-18536353:-|nuORF'] 97933 12227 SHQFRNLP True NCI_RA007_Epitope_Rep1 997.50936265541 997.50826993586 51.529 2 -2.2168561025989515 0.4535003542216784 1.0 ['ENST00000414608.1_1_7:65238610-65238703:+|nuORF'] 48155 19840 KARRGAGI True PC9_epitope_Rep6 827.5089687325898 827.50786993586 88.975 2 -2.217022508729096 0.4535120862135589 1.0 121401 22153 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 98.153 2 -2.2171201702329926 0.4535120862135589 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 131238 23530 VVPSPGGM True NCI_RA007_Epitope_Rep4 742.36836096578 742.36781496793 102.09 1 -2.2178448376602007 0.45351408208827065 1.0 ['ENST00000277541.6_1_9:139389036-139389225:-|nuORF'] 100013 15392 SLKAANAA True NCI_RA007_Epitope_Rep2 744.41300265908 744.4124549679301 64.571 1 -2.2180419501244324 0.45351408208827065 1.0 ['nc|ENSG00000204574|Q8NE71-2|ABCF1', 'ENSG00000204574|ENST00000326195|ABCF1'] 56805 11915 LEAYIYVFSQP True PC9_epitope_Rep1 1328.66525416012 1328.66414993586 50.698 2 -2.218101043867443 0.45351408208827065 1.0 ['ENSG00000172031|ENST00000370383|EPHX4'] 111880 20884 TLRPQFEAKYY True PC9_epitope_Rep2 1414.7245003717399 1414.7234099358602 85.773 2 -2.2182541251541408 0.45351408208827065 1.0 ['nc|ENSG00000134343|Q9BYT9-2|ANO3', 'ENSG00000134343|ENST00000256737|ANO3'] 89550 19779 RERRKSLFK True NCI_RA007_Epitope_Rep4 1218.7309231648599 1218.7292849037901 85.481 3 -2.218437240675422 0.45352581302994527 1.0 ['ENSG00000099308|ENST00000687212|MAST3'] 126977 772 VPVVGKKA True NCI_RA007_Epitope_Rep1 796.5170738047998 796.51596993586 4.0924 2 -2.2184534583279585 0.45352581302994527 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 121393 23246 VGHSAGHP True PC9_epitope_Rep5 760.36163579256 760.36052993586 94.4 2 -2.2186798469770808 0.4535316783119211 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 80015 26018 PKGFVGLK True PC9_epitope_Rep1 844.5170738047999 844.5165249679301 105.29 1 -2.218852180403078 0.4535326757751709 1.0 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant', 'nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'ENSG00000114374|ENST00000338981|USP9Y'] 55617 12611 LCTYVIHI True NCI_RA007_Epitope_Rep5 960.5102741722001 960.50916993586 55.161 2 -2.218885400941554 0.4535326757751709 1.0 ['nc|ENSG00000131233|P57773-2|GJA9', 'ENSG00000131233|ENST00000357771|GJA9'] 112932 24653 TPRASVGN True NCI_RA007_Epitope_Rep1 800.41406528824 800.41296993586 102.09 2 -2.218999113441726 0.4535415325177077 1.0 ['nc|ENSG00000188827|Q8IY92-2|SLX4', 'ENSG00000188827|ENST00000294008|SLX4'] 90390 21389 RILHVRNAPS True H1975_Epitope_Rep3 1161.67307393557 1161.67141490379 89.374 3 -2.2192609756432398 0.4535415325177077 1.0 ['ENSG00000087299|ENST00000267436|L2HGDH'] 101699 24802 SPGGCARR True PC9_epitope_Rep1 802.38680499458 802.38570993586 100.29 2 -2.219373093182129 0.4535415325177077 1.0 ['ENST00000482212.1_3_1:33283340-33283436:+|nuORF'] 2972 24408 AFKIMTQR True PC9_epitope_Rep2 993.54297128281 993.54186993586 99.455 2 -2.21955111926403 0.4535415325177077 1.0 ['nc|ENSG00000117114|O95490|ADGRL2', 'nc|ENSG00000117114|O95490-7|ADGRL2', 'nc|ENSG00000117114|O95490-6|ADGRL2', 'nc|ENSG00000117114|O95490-3|ADGRL2', 'nc|ENSG00000117114|O95490-4|ADGRL2', 'ADGRL2|p.A1202Rfs*21|1|0.14|ENSG00000117114|chr1:81987006-81987025|CAGCTCCTGTATTTAACTCA/-|frameshift_variant', 'nc|ENSG00000117114|O95490-2|ADGRL2', 'nc|ENSG00000117114|O95490-5|ADGRL2', 'ENSG00000117114|ENST00000686636|ADGRL2'] 29889 11621 FVYNYLKYM True NCI_RA007_Epitope_Rep4 1239.5998174525898 1239.59872993586 51.654 2 -2.219951147000016 0.4535415325177077 1.0 ['ENST00000340807.3_1_13:99910724-99913984:-|nuORF'] 121386 21997 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 91.744 2 -2.220246161170293 0.4535415325177077 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 25557 6007 FERWMEWQPEE True H1975_Epitope_Rep1 1565.6609141390097 1565.65980993586 28.177 2 -2.2202599004196197 0.4535415325177077 1.0 ['ENSG00000101343|ENST00000536226|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0-3|CRNKL1', 'nc|ENSG00000101343|Q9BZJ0|CRNKL1'] 90801 25354 RKRWFVLRRG True PC9_epitope_Rep5 1372.8316402656396 1372.83107496793 102.73 1 -2.220859511764187 0.453549390996405 1.0 ['nc|ENSG00000160219|Q8WWW8-3|GAB3', 'nc|ENSG00000160219|Q8WWW8|GAB3', 'ENSG00000160219|ENST00000424127|GAB3', 'ENST00000496390.5_1_X:153928333-153979808:-|nuORF'] 71283 21158 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 88.408 2 -2.2208676149534394 0.453549390996405 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 92805 21260 RRLIKEHTK True PC9_epitope_Rep6 1179.72002412799 1179.71836490379 94.629 3 -2.2210326362448107 0.453549390996405 1.0 ['ENST00000505150.5_1_4:169411574-169413987:-|nuORF'] 117439 23817 VADRQLVR True PC9_epitope_Rep1 955.5563128478299 955.55520993586 96.409 2 -2.221089735582012 0.453549390996405 1.0 ['ENST00000478486.5_1_6:31940188-31947331:+|nuORF', 'ENST00000469907.1_1_6:31940369-31948823:+|nuORF', 'ENST00000479644.1_1_6:31939773-31940810:+|nuORF'] 121697 20696 VGLLVGGL True PC9_epitope_Rep1 726.4639756027799 726.4634249679301 84.432 1 -2.2212558979467065 0.453549390996405 1.0 ['ENSG00000090020|ENST00000263980|SLC9A1', 'nc|ENSG00000090020|P19634-2|SLC9A1'] 125821 21859 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 91.208 2 -2.221830203715896 0.4535651054241107 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 112803 5582 TPLSAAAHTH True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 26.86 2 -2.2220593394499426 0.4535651054241107 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 63731 11868 LPRDLLQV True NCI_RA007_Epitope_Rep5 952.5705659296399 952.56946993586 52.307 2 -2.222133467177211 0.4535651054241107 1.0 ['ENSG00000275793|ENST00000619918|RIMBP3'] 110809 19634 TKRKEVKRY True H1975_Epitope_Rep3 1206.71968977482 1206.71858993586 82.248 2 -2.2227190863512085 0.4535651054241107 1.0 ['ENSG00000188786|ENST00000373036|MTF1'] 54657 16724 LADTVLKI True NCI_RA007_Epitope_Rep5 871.5378688190299 871.53676993586 71.092 2 -2.222886246408232 0.4535651054241107 1.0 ['ENSG00000130758|ENST00000253055|MAP3K10', 'ENST00000593906.1_1_19:40698163-40710439:+|nuORF'] 100547 18562 SLPTWGKV True PC9_epitope_Rep6 886.4912529797799 886.49070496793 84.038 1 -2.2228916884713263 0.4535651054241107 1.0 ['ENSG00000183067|ENST00000380588|IGSF5'] 33083 5948 GKGPGGGP True H1975_Epitope_Rep3 625.3183739982501 625.31782496793 27.89 1 -2.2229103202559957 0.4535651054241107 1.0 ['ENST00000536889.1_1_X:102565527-102565842:-|nuORF'] 121403 22532 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 99.681 2 -2.222921849805821 0.4535651054241107 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 130913 22922 VVHSALLA True PC9_epitope_Rep6 808.48068829608 808.47958993586 101.28 2 -2.2230467795811464 0.4535651054241107 1.0 ['ENSG00000104442|ENST00000276569|ARMC1'] 32345 14031 GGCGPSGP True NCI_RA007_Epitope_Rep3 630.24316045266 630.2426149679301 62.499 1 -2.2230788608137435 0.4535651054241107 1.0 ['ENSG00000182103|ENST00000329203|FAM181B'] 92852 17580 RRLREFAK True NCI_RA007_Epitope_Rep3 1074.6410455312998 1074.64047496793 77.111 1 -2.2234665310502515 0.45358756183138943 1.0 ['ENSG00000135205|ENST00000285871|CCDC146', 'nc|ENSG00000135205|Q8IYE0-2|CCDC146'] 127292 10453 VQLLPRCP True NCI_RA007_Epitope_Rep4 924.5215075622399 924.52095496793 47.057 1 -2.22346827747613 0.45358756183138943 1.0 ['ENST00000496385.5_1_22:26849136-26861668:-|nuORF', 'ENST00000464362.5_1_22:26849201-26861668:-|nuORF'] 129092 9474 VTATDVRVV True PC9_epitope_Rep5 958.54474510462 958.54364993586 41.398 2 -2.2235994563799197 0.45358855781714397 1.0 ['ENSG00000162068|ENST00000293973|NTN3'] 90424 17774 RIPRPQHK True NCI_RA007_Epitope_Rep3 1030.6148307834599 1030.6137299358602 77.928 2 -2.223611104104596 0.45358855781714397 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000285383.6_1_7:6895119-6895377:-|nuORF'] 60667 10791 LITVREPL True PC9_epitope_Rep4 939.5753169569099 939.57420993586 49.266 2 -2.223804501193772 0.4536051502145923 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4'] 121354 21946 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 91.741 2 -2.2239984661664685 0.4536217422559844 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 39278 16720 HLPHFISS True NCI_RA007_Epitope_Rep4 936.48175092524 936.48064993586 72.497 2 -2.2242561793767495 0.45363833394133174 1.0 ['ENST00000583268.1_1_17:38412646-38433335:+|nuORF'] 60306 12684 LIEVDDERK True PC9_epitope_Rep1 1115.5822528121498 1115.58167496793 53.66 1 -2.2248582298735844 0.4536559197467947 1.0 ['ENSG00000137154|ENST00000380394|RPS6'] 122756 14019 VGVFLRQL True PC9_epitope_Rep5 930.5650866263798 930.56398993586 58.94 2 -2.224897336480855 0.4536559197467947 1.0 ['ENSG00000156026|ENST00000373053|MCU', 'nc|ENSG00000156026|Q8NE86-2|MCU', 'nc|ENSG00000156026|Q8NE86-3|MCU'] 103352 21988 SQVELQAA True PC9_epitope_Rep6 844.4290466460398 844.4279499358599 97.498 2 -2.2251196662641846 0.4536559197467947 1.0 ['nc|ENSG00000147573|Q9BYV6-2|TRIM55', 'TRIM55|p.L379F|1|0.24|ENSG00000147573|chr8:66152526-66152526|C/T|missense_variant', 'nc|ENSG00000147573|Q9BYV6-3|TRIM55', 'TRIM55|p.G510Dfs*34|1|0.14|ENSG00000147573|chr8:66174474-66174474|G/-|frameshift_variant', 'ENSG00000147573|ENST00000315962|TRIM55'] 93603 24729 RSYKQKKK True PC9_epitope_Rep4 1064.6454622054 1064.6443699358601 103.62 2 -2.225477401983139 0.45367837179610976 1.0 ['nc|ENSG00000085224|P46100-2|ATRX', 'nc|ENSG00000085224|P46100-5|ATRX', 'nc|ENSG00000085224|P46100-3|ATRX', 'nc|ENSG00000085224|P46100-4|ATRX', 'ENSG00000085224|ENST00000373344|ATRX'] 125016 22438 VLPAAQLR True H1975_Epitope_Rep2 866.5337864981 866.53268993586 92.725 2 -2.2255428171687788 0.45367837179610976 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 30299 22631 GAASRFVK True NCI_RA007_Epitope_Rep5 834.47118624154 834.47008993586 94.233 2 -2.225806568616533 0.4536803596142086 1.0 ['ENSG00000197223|ENST00000410067|C1D'] 64666 19329 LRKAGGTG True H1975_Epitope_Rep3 758.43988611326 758.43878993586 81.021 2 -2.2258536204723884 0.4536803596142086 1.0 ['ENSG00000164062|ENST00000296456|APEH', 'ENST00000463616.1_1_3:49711921-49713416:+|nuORF', 'APEH|p.I191Pfs*3|1|0.09|ENSG00000164062|chr3:49676182-49676185|AGAT/-|frameshift_variant', 'ENST00000447541.5_1_3:49713127-49713830:+|nuORF', 'ENST00000463995.5_1_3:49713127-49713790:+|nuORF'] 131028 24444 VVLKRLFM True H1975_Epitope_Rep1 1004.62049332752 1004.61938993586 101.33 2 -2.226143333188814 0.4536803596142086 1.0 ['nc|ENSG00000063177|Q07020-2|RPL18', 'ENSG00000063177|ENST00000549920|RPL18', 'ENST00000552851.1_1_19:49119841-49122400:-|nuORF', 'ENST00000552705.5_1_19:49119841-49122400:-|nuORF', 'ENST00000547892.1_1_19:49120227-49120731:-|nuORF', 'ENST00000552347.5_1_19:49120227-49122400:-|nuORF', 'ENST00000478088.1_1_16:76269257-76269449:-|nuORF'] 80013 24943 PKGFVGLK True H1975_Epitope_Rep3 844.5170738047999 844.51596993586 103.76 2 -2.2263955735012626 0.4536803596142086 1.0 ['ENSG00000124486|ENST00000378308|USP9X', 'nc|ENSG00000124486|Q93008-3|USP9X', 'USP9X|p.R1658Hfs*30|1|0.17|ENSG00000124486|chrX:41205451-41205451|G/-|frameshift_variant', 'USP9X|p.R1896Sfs*4|2|0.46|ENSG00000124486|chrX:41216251-41216252|-/T|frameshift_variant', 'USP9X|p.Y1939Lfs*16|1|0.39|ENSG00000124486|chrX:41216381-41216382|-/T|frameshift_variant', 'nc|ENSG00000114374|O00507-2|USP9Y', 'ENST00000426564.6_1_Y:14821380-14953057:+|nuORF', 'ENSG00000114374|ENST00000338981|USP9Y'] 125585 8715 VMAEERVVM True H1975_Epitope_Rep1 1062.5201872328998 1062.5190899358602 38.45 2 -2.2268059252448666 0.4536823472617068 1.0 ['ENSG00000149418|ENST00000278742|ST14'] 109315 11412 TGGGGGGD True NCI_RA007_Epitope_Rep3 576.21396849936 576.2134249679301 52.014 1 -2.227037624056609 0.4536823472617068 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 92562 18633 RRARLPVH True NCI_RA007_Epitope_Rep2 1003.6151651366299 1003.61406993586 77.277 2 -2.227114742771723 0.4536823472617068 1.0 ['nc|ENSG00000122390|Q9H7X0-4|NAA60'] 52705 23881 KQKQPRKKI True NCI_RA007_Epitope_Rep3 1152.7455105998397 1152.7438649037902 103.47 3 -2.227277496429203 0.4536823472617068 1.0 ['ENST00000283195.10_1_2:109384301-109384340:+|nuORF'] 71282 20872 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 87.279 2 -2.22738827126676 0.45368820803295573 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 121361 16957 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 74.563 2 -2.2277527536382093 0.4536932762744404 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 51934 17534 KKTHYGLL True PC9_epitope_Rep6 958.5600012459398 958.55890993586 80.084 2 -2.2278291195237903 0.4536932762744404 1.0 ['ENSG00000055147|ENST00000351797|FAM114A2', 'ENST00000518735.1_1_5:153405944-153406840:-|nuORF'] 125792 26661 VNLKLGDD True H1975_Epitope_Rep3 872.4603467743199 872.45924993586 111.34 2 -2.2278908804608166 0.4536932762744404 1.0 ['ENST00000528824.1_1_1:99156655-99156700:+|nuORF'] 81577 22589 PRKPRRNQR True PC9_epitope_Rep4 1206.71700443622 1206.71647496793 95.12 1 -2.2279469347239687 0.4536932762744404 1.0 ['ENST00000592045.5_1_18:53717369-53763461:+|nuORF', 'ENST00000589450.5_1_18:53745418-53763461:+|nuORF', 'ENST00000588139.1_1_18:53755736-53763461:+|nuORF'] 103459 18401 SRAGSLEPEGR True PC9_epitope_Rep5 1157.57889876721 1157.5772549037902 75.798 3 -2.228318302008166 0.4536932762744404 1.0 ['ENST00000479115.5_1_3:49723420-49723642:-|nuORF'] 29855 11695 FVWLEDIQ True NCI_RA007_Epitope_Rep1 1048.5229470308798 1048.52184993586 49.465 2 -2.22835037148236 0.4536932762744404 1.0 ['ENSG00000119720|ENST00000354366|NRDE2'] 19455 18630 ELPTALKGR True PC9_epitope_Rep1 983.5763795860698 983.57528993586 76.448 2 -2.2285442175293944 0.4536932762744404 1.0 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant', 'PHF21A-CKAP5|3|fusion', 'PHF21A-CKAP5|1|fusion', 'PHF21A-CKAP5|4|fusion', 'PHF21A-CKAP5|2|fusion'] 83114 24377 PYPDFLPP True NCI_RA007_Epitope_Rep5 944.4643695256 944.46326993586 101.23 2 -2.22861566261539 0.4536932762744404 1.0 ['ENSG00000145975|ENST00000274673|FAM217A'] 82524 9195 PVFIPLEEI True NCI_RA007_Epitope_Rep2 1055.59029831471 1055.58920993586 40.375 2 -2.2288129437036526 0.4536932762744404 1.0 ['nc|ENSG00000138092|Q9BU64-2|CENPO', 'ENSG00000138092|ENST00000380834|CENPO', 'ENST00000491031.5_1_2:25016788-25038721:+|nuORF'] 79691 20612 PHLLNGKG True NCI_RA007_Epitope_Rep4 834.47118624154 834.47008993586 89.273 2 -2.2288764984173413 0.4536932762744404 1.0 ['ENST00000254351.8_1_2:20400819-20401029:-|nuORF'] 39089 16208 HLAKNQGK True NCI_RA007_Epitope_Rep4 894.5035489989799 894.50244993586 70.285 2 -2.2289125492756536 0.4536932762744404 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 90044 22208 RGGPVRVA True PC9_epitope_Rep4 810.4824196315799 810.48132993586 93.667 2 -2.229127111108814 0.4536932762744404 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 70318 14435 LYPHRKNV True PC9_epitope_Rep5 1025.57704829241 1025.57594993586 60.524 2 -2.2291601359190567 0.4536932762744404 1.0 ['nc|ENSG00000163629|Q12923-3|PTPN13', 'ENSG00000163629|ENST00000411767|PTPN13', 'nc|ENSG00000163629|Q12923-4|PTPN13'] 79629 20244 PHCPVFLG True PC9_epitope_Rep6 868.4265445482399 868.42544993586 90.552 2 -2.229218115918664 0.4536932762744404 1.0 ['ENST00000558018.5_1_15:89442371-89442626:-|nuORF'] 120543 23137 VGAAIRKW True PC9_epitope_Rep5 899.5341208512699 899.53357496793 93.985 1 -2.229251854880808 0.4536932762744404 1.0 ['nc|ENSG00000176273|Q2M3R5-2|SLC35G1', 'ENSG00000176273|ENST00000427197|SLC35G1'] 136850 22246 YIVRGLLHR True NCI_RA007_Epitope_Rep4 1125.6770966868498 1125.67546490379 96.504 3 -2.229426666738383 0.4536932762744404 1.0 ['IQCH|p.S577R|1|0.37|ENSG00000103599|chr15:67395389-67395389|C/A|missense_variant'] 109314 11328 TGGGGGGD True NCI_RA007_Epitope_Rep3 576.21396849936 576.2134249679301 51.672 1 -2.229498248444758 0.4536932762744404 1.0 ['ENSG00000185668|ENST00000373012|POU3F1', 'nc|ENSG00000245848|P49715-2|CEBPA', 'ENSG00000245848|ENST00000498907|CEBPA', 'nc|ENSG00000245848|P49715-4|CEBPA'] 70613 21785 MAAEGGGAAA True PC9_epitope_Rep4 804.3436027699198 804.34250993586 91.99 2 -2.229598424857106 0.4536932762744404 1.0 ['ENST00000450536.6_1_6:139309287-139309344:-|nuORF'] 37622 25572 HAAAPGGG True H1975_Epitope_Rep1 636.2979729068401 636.29742496793 106.0 1 -2.229643577034133 0.4536932762744404 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 121395 24592 VGHSAGHP True PC9_epitope_Rep5 760.36163579256 760.36052993586 99.707 2 -2.2297190576700783 0.4536932762744404 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 72541 17220 MVFHIIDL True NCI_RA007_Epitope_Rep4 986.52592423634 986.52482993586 74.549 2 -2.229740570080714 0.4536932762744404 1.0 ['ENSG00000011454|ENST00000373647|RABGAP1', 'ENST00000474707.1_1_9:125835857-125839047:+|nuORF', 'nc|ENSG00000152061|Q5R372-7|RABGAP1L', 'nc|ENSG00000152061|Q5R372-6|RABGAP1L', 'nc|ENSG00000152061|Q5R372-5|RABGAP1L', 'ENSG00000152061|ENST00000681986|RABGAP1L', 'nc|ENSG00000152061|Q5R372-4|RABGAP1L', 'nc|ENSG00000152061|Q5R372|RABGAP1L', 'nc|ENSG00000152061|Q5R372-3|RABGAP1L'] 92095 19705 RPVYNWNKATT True NCI_RA007_Epitope_Rep5 1348.6887835693599 1348.6876899358601 82.706 2 -2.230952450739241 0.4537205860271563 1.0 ['HTR3B|p.T54N|2|0.18|ENSG00000149305|chr11:113909403-113909403|C/A|missense_variant'] 97766 20192 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 84.611 2 -2.2315257596829263 0.4537323037323037 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 82427 7426 PVCFHLGLGLP True NCI_RA007_Epitope_Rep5 1151.6161362230698 1151.61557496793 35.242 1 -2.2315623175207726 0.4537323037323037 1.0 ['ENSG00000248483|ENST00000606183|POU5F2'] 69390 17437 LVQKVGFF True NCI_RA007_Epitope_Rep5 936.5432885526399 936.54218993586 73.855 2 -2.23224961964761 0.4537539405116768 1.0 ['CLTC-VMP1|9|fusion', 'CLTC-VMP1|6|fusion', 'CLTC-VMP1|8|fusion', 'CLTC-VMP1|7|fusion', 'CLTC-VMP1|21|fusion', 'CLTC-VMP1|3|fusion', 'CLTC-VMP1|22|fusion', 'CLTC-VMP1|11|fusion', 'CLTC-VMP1|16|fusion', 'CLTC-VMP1|24|fusion', 'CLTC-VMP1|18|fusion', 'CLTC-VMP1|2|fusion', 'CLTC-VMP1|10|fusion', 'RPS6KB1-VMP1|4|fusion', 'RPS6KB1-VMP1|12|fusion', 'RPS6KB1-VMP1|3|fusion', 'RPS6KB1-VMP1|6|fusion', 'RPS6KB1-VMP1|10|fusion', 'RPS6KB1-VMP1|9|fusion', 'RPS6KB1-VMP1|2|fusion', 'nc|ENSG00000062716|Q96GC9-2|VMP1', 'CLTC-VMP1|13|fusion', 'CLTC-VMP1|20|fusion', 'ENSG00000062716|ENST00000262291|VMP1'] 83522 14958 QDKSVVNK True NCI_RA007_Epitope_Rep3 916.4977949122 916.49668993586 66.278 2 -2.2324325167720716 0.4537539405116768 1.0 ['nc|ENSG00000003147|Q05084-3|ICA1', 'ENSG00000003147|ENST00000402384|ICA1', 'nc|ENSG00000003147|Q05084-2|ICA1'] 103653 3743 SRDNPFKRTNE True NCI_RA007_Epitope_Rep1 1362.6640253734997 1362.66238490379 18.532 3 -2.2324358091388463 0.4537539405116768 1.0 ['ENSG00000171951|ENST00000305409|SCG2'] 126012 20536 VPAHEMPT True NCI_RA007_Epitope_Rep5 880.41128840692 880.41018993586 85.933 2 -2.232571058137348 0.4537539405116768 1.0 ['nc|ENSG00000099814|Q9Y4F5-3|CEP170B', 'ENSG00000099814|ENST00000414716|CEP170B', 'nc|ENSG00000099814|Q9Y4F5|CEP170B'] 128621 23473 VSLAGARR True PC9_epitope_Rep1 828.49298431528 828.49188993586 95.075 2 -2.2329263601065117 0.4537539405116768 1.0 ['ENST00000596597.5_1_19:58757693-58758161:+|nuORF', 'ENST00000598880.5_1_19:58740873-58772232:+|nuORF'] 55374 22890 LASPEPLVA True H1975_Epitope_Rep1 895.5014833103099 895.5009349679301 95.196 1 -2.2331743510057978 0.4537539405116768 1.0 ['ENSG00000130158|ENST00000294618|DOCK6', 'ENST00000591750.1_1_19:11346944-11347244:-|nuORF'] 54739 20149 LAEPEAKRIRL True NCI_RA007_Epitope_Rep1 1294.7721192704998 1294.77046490379 82.584 3 -2.2333056814233743 0.4537539405116768 1.0 ['ENSG00000141994|ENST00000309061|DUS3L', 'nc|ENSG00000141994|Q96G46-2|DUS3L', 'ENST00000589854.1_1_19:5790042-5791152:-|nuORF'] 82917 3610 PWDWQIGLLY True H1975_Epitope_Rep3 1289.6444591458899 1289.64280490379 18.903 3 -2.2341585932460357 0.4537539405116768 1.0 ['nc|ENSG00000196376|Q5T1Q4-2|SLC35F1', 'ENSG00000196376|ENST00000360388|SLC35F1'] 36800 11379 GVPPGLCW True NCI_RA007_Epitope_Rep3 827.39999544723 827.39888993586 51.88 2 -2.2343111115762437 0.4537539405116768 1.0 ['ENST00000531735.5_1_17:43481028-43481106:-|nuORF'] 57083 23928 LEELEEHRF True PC9_epitope_Rep2 1200.5775017848798 1200.57640993586 97.518 2 -2.2347495002389026 0.4537539405116768 1.0 ['ENST00000460066.5_1_6:9769165-9933129:-|nuORF', 'nc|ENSG00000181355|Q8IZS5-3|OFCC1'] 103827 23328 SRHRRRRL True PC9_epitope_Rep1 1135.69112404155 1135.6900299358601 94.523 2 -2.234972674317181 0.4537539405116768 1.0 ['ENST00000462917.1_1_17:39845146-39845518:+|nuORF'] 88952 19374 REDIKIC[Carbamidomethyl]D True PC9_epitope_Rep4 1047.5018945959 1047.5007899358602 82.632 2 -2.2351730725063876 0.4537539405116768 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN'] 32413 16592 GGGKPQAA True NCI_RA007_Epitope_Rep1 684.3554877829599 684.35493496793 68.655 1 -2.23519290202904 0.4537539405116768 1.0 ['nc|ENSG00000151233|Q4G148-2|GXYLT1', 'ENSG00000151233|ENST00000398675|GXYLT1', 'GXYLT1-TMEM117|1|fusion'] 35942 9483 GVAREHHV True PC9_epitope_Rep6 903.4674978434301 903.46640993586 46.725 2 -2.2355599595658657 0.4537539405116768 1.0 ['ENSG00000148357|ENST00000683500|HMCN2', 'nc|ENSG00000148357|Q8NDA2-1|HMCN2', 'nc|ENSG00000148357|Q8NDA2-4|HMCN2'] 112538 21247 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 87.936 2 -2.2355740175123024 0.4537539405116768 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 91433 24807 RNLPLAIIIGI True NCI_RA007_Epitope_Rep5 1191.77032836535 1191.76922993586 102.91 2 -2.235612695605755 0.4537539405116768 1.0 ['ENSG00000021488|ENST00000023064|SLC7A9'] 133296 7881 WEMKPYVALSQ True PC9_epitope_Rep1 1350.6642086143 1350.66256490379 35.142 3 -2.2357266250540477 0.4537539405116768 1.0 ['ENSG00000078177|ENST00000261435|N4BP2', 'nc|ENSG00000078177|Q86UW6-2|N4BP2'] 114898 13274 TTEKEEIP True H1975_Epitope_Rep3 945.4654917244098 945.46438993586 56.315 2 -2.235732796003275 0.4537539405116768 1.0 ['ENST00000529345.6_1_14:61448346-61550389:+|nuORF'] 76312 6403 NSEANQWEVA True H1975_Epitope_Rep2 1146.4941660837399 1146.4930699358601 29.553 2 -2.235777585944876 0.4537539405116768 1.0 ['ENSG00000075420|ENST00000415807|FNDC3B'] 61556 16602 LLGKAIGK True PC9_epitope_Rep3 798.5327238689399 798.53162993586 68.997 2 -2.2361393395930973 0.4537539405116768 1.0 ['chr5:151266913-151270150|106|16.43|0.39|5.39|+|1|TE_info:L1MC4a,L1MC4a_dup3311,L1,LINE,acceptor,+,151270150,151271608|GM2A,None|21'] 2746 7845 AEVAQQEF True H1975_Epitope_Rep2 920.4239612655999 920.4234149679301 35.125 1 -2.2362261396059675 0.4537539405116768 1.0 ['ENSG00000127603|ENST00000564288|MACF1', 'MACF1|p.D6699Mfs*20|1|0.23|ENSG00000127603|chr1:39451199-39451199|G/-|frameshift_variant', 'nc|ENSG00000127603|Q9UPN3-5|MACF1', 'MACF1-LYPLA1|1|fusion', 'nc|ENSG00000127603|Q9UPN3|MACF1', 'MACF1-INPP5B|1|fusion'] 126458 16743 VPLSEFDF True NCI_RA007_Epitope_Rep5 952.4541987647199 952.45310993586 71.164 2 -2.2362513071973127 0.4537539405116768 1.0 ['ENSG00000088205|ENST00000263239|DDX18', 'ENST00000450119.1_1_10:92814408-92814468:+|nuORF'] 136849 22136 YIVRGLLHR True H1975_Epitope_Rep3 1125.6770966868498 1125.67546490379 92.575 3 -2.2365296782238366 0.453759797561734 1.0 ['IQCH|p.S577R|1|0.37|ENSG00000103599|chr15:67395389-67395389|C/A|missense_variant'] 49281 22075 KHIARLSQKQ True PC9_epitope_Rep6 1207.71493874755 1207.71328490379 97.847 3 -2.2368178236291163 0.45376664593742627 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G', 'PIK3C2G|p.K900Rfs*29|1|0.36|ENSG00000139144|chr12:18491461-18491462|AG/-|frameshift_variant', 'PIK3C2G|p.G1094Efs*4|1|0.24|ENSG00000139144|chr12:18505418-18505418|G/-|frameshift_variant'] 3270 5661 AGFSVGFGASS True PC9_epitope_Rep2 985.4505103666098 985.44940993586 27.163 2 -2.2369223276227133 0.45376664593742627 1.0 ['CON__Q6IME9'] 79807 21677 PIDDNRWH True PC9_epitope_Rep5 1051.48354183039 1051.48297496793 88.428 1 -2.2369348894854686 0.45376664593742627 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF'] 95730 4153 SCCCCCCC True PC9_epitope_Rep5 826.10688658094 826.10578993586 21.047 2 -2.237107369034273 0.4537725026000622 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 15745 26890 EDEDDDHC True PC9_epitope_Rep2 976.27161959812 976.2705299358599 110.57 2 -2.2374350411768313 0.45379691872245986 1.0 ['USP34|p.G630C|1|0.36|ENSG00000115464|chr2:61348267-61348267|C/A|missense_variant'] 93680 25071 RTKFRRAM True PC9_epitope_Rep2 1064.6025518475997 1064.60144993586 102.1 2 -2.2376566326905762 0.45379691872245986 1.0 ['ENST00000446716.5_1_2:220075515-220081188:-|nuORF', 'nc|ENSG00000115657|Q9NP58-4|ABCB6', 'ENSG00000115657|ENST00000265316|ABCB6', 'ENST00000497882.5_1_2:220079083-220079278:-|nuORF'] 73370 8682 NEQKLSIYQ True PC9_epitope_Rep4 1121.57168812845 1121.5705899358602 40.887 2 -2.2377876787073485 0.45379691872245986 1.0 ['ENST00000396623.7_1_8:67380853-67381021:+|nuORF'] 112547 22632 TPAHHPPG True H1975_Epitope_Rep3 812.3929359208399 812.39182993586 94.588 2 -2.2378482725128546 0.45379691872245986 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 80244 13441 PLCPLAHA True H1975_Epitope_Rep2 820.42654454824 820.42544993586 56.835 2 -2.237887613253362 0.45379691872245986 1.0 ['ENST00000482847.5_1_9:116154440-116155869:-|nuORF', 'ENST00000464749.5_1_9:116153152-116155869:-|nuORF', 'ENST00000494848.1_1_9:116155725-116163557:-|nuORF', 'ENST00000468504.5_1_9:116152961-116155869:-|nuORF'] 125019 14418 VLPAAQLR True NCI_RA007_Epitope_Rep3 866.5337864981 866.53268993586 64.025 2 -2.2381395367924255 0.45379691872245986 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 85372 10214 QLEAPAKK True H1975_Epitope_Rep1 883.5127167003499 883.5121649679301 44.23 1 -2.2384973013162304 0.45379890005038753 1.0 ['ENSG00000158163|ENST00000327532|DZIP1L'] 40197 24867 HRGEIWKFL True PC9_epitope_Rep2 1184.6454622054 1184.6443699358601 101.33 2 -2.238595966769586 0.45379890005038753 1.0 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1'] 97947 15609 SHQNMTES True NCI_RA007_Epitope_Rep5 932.3657947664801 932.36468993586 66.749 2 -2.238607397606914 0.45379890005038753 1.0 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000493238.1_1_3:149677832-149678888:+|nuORF', 'nc|ENSG00000082996|O43567-2|RNF13'] 81138 16551 PPIMLIGH True NCI_RA007_Epitope_Rep5 876.4891448047999 876.48804993586 70.424 2 -2.239022970100216 0.45379890005038753 1.0 ['ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 114652 11477 TSPVSKKVP True PC9_epitope_Rep4 941.55458151233 941.55348993586 51.908 2 -2.2392191661330227 0.4538047556765797 1.0 ['APC|p.G2250V|1|0.46|ENSG00000134982|chr5:112842343-112842343|G/T|missense_variant'] 125820 21684 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 90.509 2 -2.239529159624659 0.4538164665523156 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 112545 23388 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 96.427 2 -2.2397336357781907 0.4538164665523156 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 38337 16277 HFYRRYFWLVV True NCI_RA007_Epitope_Rep2 1584.8353882334 1584.8342899358602 68.043 2 -2.2398483343390314 0.45381844689335793 1.0 ['ENSG00000188582|ENST00000340634|PAQR9'] 90679 1283 RKLKSWLLQ True NCI_RA007_Epitope_Rep1 1170.7237125261 1170.7220549037902 6.7871 3 -2.239865601062802 0.45381844689335793 1.0 ['ENST00000394701.4_1_4:107258107-107268703:+|nuORF'] 133986 21831 WPLLNLWNLRF True PC9_epitope_Rep6 1470.81359015966 1470.8124899358602 96.874 2 -2.2399038306040984 0.45381844689335793 1.0 ['nc|ENSG00000167815|P32119-2|PRDX2', 'ENST00000466174.5_1_19:12911560-12912565:-|nuORF'] 64231 25600 LQKKKKHSA True NCI_RA007_Epitope_Rep1 1066.66111226954 1066.6600099358602 105.95 2 -2.2399991088899176 0.45381844689335793 1.0 ['PAPOLA|p.T510A|1|0.47|ENSG00000090060|chr14:96552486-96552486|A/G|missense_variant'] 134704 13481 WWRCFPERWFP True PC9_epitope_Rep4 1608.7448589768396 1608.7437699358602 59.752 2 -2.2408681174687928 0.45385159616662735 1.0 ['nc|nan|Q6UWU4-3|C6orf89', 'ENSG00000198663|ENST00000480824|C6orf89', 'nc|nan|Q6UWU4-2|C6orf89'] 122408 15676 VGSGRYDT True PC9_epitope_Rep1 853.39299549049 853.39244496793 65.119 1 -2.241163794755857 0.45385159616662735 1.0 ['nc|ENSG00000163803|Q6P1J6-3|PLB1', 'ENSG00000163803|ENST00000327757|PLB1'] 87211 22968 QSNHHCHA True NCI_RA007_Epitope_Rep5 932.36713217916 932.36602993586 95.579 2 -2.2418836575673198 0.4538788898774749 1.0 ['SLC30A2|p.K234Qfs*4|1|0.32|ENSG00000158014|chr1:26039903-26039904|-/G|frameshift_variant', 'nc|ENSG00000158014|Q9BRI3-1|SLC30A2', 'ENSG00000158014|ENST00000374276|SLC30A2'] 27082 8097 FLPPAPAA True PC9_epitope_Rep4 782.4326754744999 782.43156993586 38.599 2 -2.242101127071698 0.453906183003173 1.0 ['ENST00000407319.6_1_22:38142252-38150984:+|nuORF'] 80071 22354 PKGKRSLN True PC9_epitope_Rep6 898.5348491272599 898.53374993586 98.956 2 -2.242156304089695 0.4539071711866224 1.0 ['NPVF|p.E54K|2|0.22|ENSG00000105954|chr7:25227005-25227005|C/T|missense_variant'] 77774 25009 PAAYIQKLK True PC9_epitope_Rep3 1030.61751612206 1030.61640993586 101.54 2 -2.2423837261738218 0.4539071711866224 1.0 ['ENSG00000184922|ENST00000331495|FMNL1', 'nc|ENSG00000184922|O95466-2|FMNL1', 'nc|ENSG00000184922|O95466-3|FMNL1'] 79804 24710 PIDDAYMG True PC9_epitope_Rep1 880.36366950816 880.36256993586 99.935 2 -2.242430484762567 0.453913024836265 1.0 ['ENSG00000198488|ENST00000622824|B3GNT6', 'nc|ENSG00000198488|Q6ZMB0-3|B3GNT6'] 10587 19989 CRRKKLYLLF True NCI_RA007_Epitope_Rep5 1338.7958319205397 1338.79472993586 83.805 2 -2.242870419552533 0.45392959739313127 1.0 ['POPDC3|p.W212C|1|0.2|ENSG00000132429|chr6:105158710-105158710|C/A|missense_variant'] 110782 20186 TKNIKKNPHK True NCI_RA007_Epitope_Rep5 1206.7196897748202 1206.71858993586 84.589 2 -2.2430008392310063 0.45394616959471773 1.0 ['ENST00000226319.10_1_4:129795591-129795780:+|nuORF'] 136234 1270 YGPTEEAA True PC9_epitope_Rep2 836.3552129994399 836.35410993586 7.1408 2 -2.243499957557415 0.4539520226381118 1.0 ['PCNX1|p.T2094Hfs*10|3|0.17|ENSG00000100731|chr14:71105417-71105418|-/G|frameshift_variant', 'nc|ENSG00000100731|Q96RV3-4|PCNX1', 'nc|ENSG00000100731|Q96RV3-3|PCNX1', 'ENSG00000100731|ENST00000304743|PCNX1'] 64725 23968 LRPRNEQRE True PC9_epitope_Rep4 1196.63741670284 1196.63687496793 100.66 1 -2.243578662692123 0.45397543355698944 1.0 ['ENSG00000065882|ENST00000698857|TBC1D1', 'nc|ENSG00000065882|Q86TI0-2|TBC1D1', 'nc|ENSG00000065882|Q86TI0|TBC1D1'] 95728 3755 SCCCCCCC True PC9_epitope_Rep5 826.10688658094 826.10578993586 19.528 2 -2.2436969558017292 0.45397543355698944 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 121367 22755 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 98.932 2 -2.244062251227892 0.45397543355698944 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 128243 24810 VRVYKSGP True PC9_epitope_Rep4 904.5130510535199 904.51250496793 103.94 1 -2.2442729582384326 0.45397543355698944 1.0 ['ENSG00000163840|ENST00000296161|DTX3L', 'nc|ENSG00000163840|Q8TDB6-2|DTX3L', 'DTX3L|p.R260Ifs*6|1|0.13|ENSG00000163840|chr3:122568867-122568868|AG/-|frameshift_variant'] 11202 23500 DELEIRWVDCY True H1975_Epitope_Rep3 1439.63911606527 1439.63800993586 98.064 2 -2.244454270778484 0.45401344065852794 1.0 ['ENSG00000145982|ENST00000274680|FARS2'] 110395 25081 TILRTWPPW True PC9_epitope_Rep5 1168.6393141958 1168.63820993586 101.61 2 -2.2446274822029233 0.45401929260450163 1.0 ['ENST00000588422.3_1_19:39109887-39111017:+|nuORF'] 44272 24654 ILVLQRHFQQ True H1975_Epitope_Rep2 1280.73533983896 1280.7342499358601 101.39 2 -2.2447675629065493 0.45403099612012604 1.0 ['ENST00000397885.2_1_9:2837287-2844066:-|nuORF'] 72154 24583 MRIILGFLLFL True PC9_epitope_Rep4 1334.8148360296198 1334.81372993586 103.05 2 -2.2451694345341404 0.45403099612012604 1.0 ['ENSG00000130943|ENST00000253255|PKDREJ'] 30506 7207 GAHFPQVP True H1975_Epitope_Rep3 851.42898707639 851.42843496793 32.698 1 -2.245243849419704 0.45403893752209923 1.0 ['ENSG00000155252|ENST00000370631|PI4K2A'] 121150 20457 VGGGQGQP True PC9_epitope_Rep6 698.33475233838 698.3342049679301 91.403 1 -2.2454714901480757 0.45403893752209923 1.0 ['nc|ENSG00000132677|Q9H310-3|RHBG'] 109173 17717 TFRALLLHR True NCI_RA007_Epitope_Rep3 1125.6770966868498 1125.67546490379 77.673 3 -2.245701860407751 0.45403893752209923 1.0 ['nc|ENSG00000164638|Q7RTT9-2|SLC29A4', 'ENSG00000164638|ENST00000396872|SLC29A4'] 124824 20762 VLLKLGIKPS True NCI_RA007_Epitope_Rep5 1066.7114165069 1066.7108749679298 86.836 1 -2.2457536260647264 0.45403893752209923 1.0 ['ENST00000496851.6_1_6:167347386-167366008:-|nuORF', 'ENST00000499370.6_1_6:167347461-167366008:-|nuORF', 'ENST00000028008.9_1_6:167343078-167365992:-|nuORF', 'ENSG00000026297|ENST00000508775|RNASET2'] 112549 21206 TPAHHPPG True NCI_RA007_Epitope_Rep3 812.3929359208399 812.39182993586 92.212 2 -2.2460215128290524 0.45403893752209923 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 135323 23369 YCPQENVL True NCI_RA007_Epitope_Rep5 964.4324177743199 964.43132993586 97.181 2 -2.246092706845339 0.45403893752209923 1.0 ['ENSG00000154262|ENST00000284425|ABCA6'] 96735 23201 SEQGPGPAAAL True H1975_Epitope_Rep3 996.4876241513198 996.48652993586 96.88 2 -2.2462213894738126 0.45403893752209923 1.0 ['ENSG00000213221|ENST00000371738|DNLZ', 'ENST00000481053.5_1_9:139257776-139258349:-|nuORF'] 87320 5781 QSYVEEQKQLK True NCI_RA007_Epitope_Rep5 1378.70924423042 1378.70814993586 28.923 2 -2.2462936706369336 0.45403893752209923 1.0 ['ENSG00000129347|ENST00000312962|KRI1', 'ENST00000478863.5_1_19:10666000-10676642:-|nuORF'] 125015 18563 VLPAAQLR True H1975_Epitope_Rep2 866.5337864981 866.53268993586 77.028 2 -2.2465549316830216 0.45403893752209923 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 126885 9658 VPTRLEGWF True PC9_epitope_Rep4 1103.5763795860698 1103.5752899358602 44.774 2 -2.2465976539380526 0.45403893752209923 1.0 ['ENSG00000168350|ENST00000305631|DEGS2'] 53118 22810 KSHAKALG True H1975_Epitope_Rep3 810.4711862415398 810.47008993586 95.305 2 -2.246612381949344 0.45403893752209923 1.0 ['nc|ENSG00000111731|Q86YS7|C2CD5', 'ENSG00000111731|ENST00000446597|C2CD5', 'ENST00000541310.5_1_12:22631189-22697084:-|nuORF', 'nc|ENSG00000111731|Q86YS7-2|C2CD5', 'nc|ENSG00000111731|Q86YS7-4|C2CD5', 'nc|ENSG00000111731|Q86YS7-5|C2CD5'] 125018 13562 VLPAAQLR True NCI_RA007_Epitope_Rep3 866.5337864981 866.53268993586 60.643 2 -2.246703415520871 0.45403893752209923 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 53261 21332 KTHAAETEM True NCI_RA007_Epitope_Rep5 1016.45969515132 1016.45858993586 89.11 2 -2.2469765796698677 0.45403893752209923 1.0 ['ENSG00000154240|ENST00000535342|CEP112', 'ENST00000580482.5_1_17:63793289-63848140:-|nuORF'] 16170 22997 EEESGAPG True NCI_RA007_Epitope_Rep4 774.3031774265799 774.30208993586 99.874 2 -2.2471903509531783 0.45403893752209923 1.0 ['ENSG00000204560|ENST00000376442|DHX16', 'nc|ENSG00000099783|P52272-2|HNRNPM', 'ENSG00000099783|ENST00000325495|HNRNPM'] 13973 20367 DRPFLFFIR True H1975_Epitope_Rep2 1209.66586329681 1209.66421490379 84.4 3 -2.2471933101937855 0.45403893752209923 1.0 ['ENSG00000135919|ENST00000409304|SERPINE2', 'nc|ENSG00000135919|P07093|SERPINE2', 'nc|ENSG00000135919|P07093-3|SERPINE2', 'ENST00000478966.1_1_2:224840586-224849719:-|nuORF', 'ENST00000473202.1_1_2:224840586-224842399:-|nuORF'] 112544 22919 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 94.604 2 -2.2473461427113706 0.45403893752209923 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 31071 20606 GAWGGGGGP True H1975_Epitope_Rep1 714.3085375905399 714.3079849679301 85.677 1 -2.2474551168342787 0.45403893752209923 1.0 ['ENST00000584573.5_1_17:61699921-61700077:+|nuORF'] 44810 25086 IPVFFAWR True PC9_epitope_Rep2 1034.5701720068198 1034.5690699358602 102.16 2 -2.247533045898753 0.45403893752209923 1.0 ['ENST00000510784.8_1_6:24875969-25042131:-|nuORF'] 78423 20559 PAYLDSHS True NCI_RA007_Epitope_Rep4 888.3977465177602 888.39664993586 89.044 2 -2.2482719063921666 0.45403893752209923 1.0 ['ENST00000430355.5_1_3:185316235-185316268:+|nuORF'] 62417 20282 LLRYSGEFV True PC9_epitope_Rep2 1082.5760452329 1082.57494993586 83.436 2 -2.2483926612783103 0.45403893752209923 1.0 ['nc|ENSG00000184634|Q93074-3|MED12', 'ENSG00000184634|ENST00000374080|MED12', 'nc|ENSG00000184634|Q93074-2|MED12'] 133995 24507 WPPSPPHR True H1975_Epitope_Rep2 972.49298431528 972.49188993586 100.82 2 -2.2484197436637396 0.45403893752209923 1.0 ['ENST00000297954.8_1_9:96070838-96080353:+|nuORF'] 59934 23227 LHLACQKG True PC9_epitope_Rep6 868.4589073056801 868.45780993586 102.44 2 -2.248465103435606 0.45403893752209923 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27', 'SENP2-ANKRD27|1|fusion'] 93385 24615 RRWNGRRLR True PC9_epitope_Rep4 1268.7438878903997 1268.7427899358602 103.17 2 -2.248945609307191 0.45403893752209923 1.0 ['nc|ENSG00000185658|Q9NSI6-3|BRWD1', 'ENSG00000185658|ENST00000342449|BRWD1', 'nc|ENSG00000185658|Q9NSI6|BRWD1'] 10393 25145 CLACHKKC True PC9_epitope_Rep5 904.40813468612 904.40702993586 101.86 2 -2.2489761144128964 0.45403893752209923 1.0 ['ENST00000587602.5_1_19:1073185-1086002:+|nuORF', 'ENSG00000180448|ENST00000313093|ARHGAP45', 'nc|ENSG00000180448|Q92619-2|ARHGAP45'] 48998 20180 KFGASRAA True NCI_RA007_Epitope_Rep4 806.43988611326 806.43878993586 87.317 2 -2.2492488368598624 0.45403893752209923 1.0 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581108.5_1_17:80207265-80210400:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 85710 5393 QLSDVQNFPYM True PC9_epitope_Rep4 1340.607087661 1340.6059899358602 27.472 2 -2.2492828085483323 0.45403893752209923 1.0 ['nc|ENSG00000169302|Q8WU08-3|STK32A', 'ENST00000306304.10_1_5:146619197-146754823:+|nuORF', 'ENSG00000169302|ENST00000397936|STK32A'] 55761 8811 LDEDLLGPG True NCI_RA007_Epitope_Rep1 927.4549270407099 927.45382993586 38.274 2 -2.2494566331745225 0.45403893752209923 1.0 ['ENST00000526878.5_1_11:460175-490579:+|nuORF', 'ENSG00000174915|ENST00000308020|PTDSS2'] 38321 23907 HFTAECRFKE True NCI_RA007_Epitope_Rep5 1266.5815416194998 1266.5798849037901 99.326 3 -2.250351006133351 0.45410420974810084 1.0 ['ENST00000575310.1_1_17:7324913-7346173:+|nuORF', 'ENST00000575331.1_1_17:7344773-7346173:+|nuORF', 'ENSG00000161958|ENST00000293829|FGF11'] 60463 5280 LILLALHRAKK True PC9_epitope_Rep3 1274.8550610488198 1274.85396993586 25.389 2 -2.2504808511318095 0.45410420974810084 1.0 ['nc|ENSG00000184307|Q8IYP9|ZDHHC23', 'ENSG00000184307|ENST00000638807|ZDHHC23'] 10779 23614 CYYVLFHL True NCI_RA007_Epitope_Rep5 1056.5102741721998 1056.5091699358602 98.152 2 -2.251017780218068 0.4541422020314576 1.0 ['nc|ENSG00000132950|Q9UJ78-1|ZMYM5', 'ENST00000467542.5_1_13:20411687-20425669:-|nuORF'] 121908 10623 VGPLELEI True NCI_RA007_Epitope_Rep5 868.4905842734399 868.49003496793 47.5 1 -2.251351880207065 0.4541431846915379 1.0 ['ENSG00000141519|ENST00000397545|CCDC40', 'nc|ENSG00000141519|Q4G0X9-3|CCDC40', 'ENST00000574799.5_1_17:78022329-78073571:+|nuORF', 'nc|ENSG00000141519|Q4G0X9-2|CCDC40', 'ENST00000572253.5_1_17:78055494-78060128:+|nuORF'] 139695 24340 YTTKKTKIL True H1975_Epitope_Rep3 1094.66994561774 1094.6688499358602 101.36 2 -2.251466127641177 0.4541431846915379 1.0 ['ENST00000311117.7_1_7:104746436-104747131:+|nuORF'] 120605 22922 VGAGHGAG True PC9_epitope_Rep1 624.29797290684 624.29742496793 92.969 1 -2.2516230554433445 0.4541558636353897 1.0 ['ENSG00000127526|ENST00000595753|SLC35E1'] 40308 19313 HRRARRERD True NCI_RA007_Epitope_Rep5 1250.6816815566597 1250.68058993586 81.163 2 -2.251669511547715 0.4541558636353897 1.0 ['ENSG00000101493|ENST00000443185|ZNF516', 'ZNF516|p.P568Qfs*10|2|0.29|ENSG00000101493|chr18:76441348-76441352|GCTGG/-|frameshift_variant'] 92846 19294 RRLLQNRRLD True NCI_RA007_Epitope_Rep3 1338.79564867974 1338.79454993586 84.239 2 -2.2518693705232713 0.4541558636353897 1.0 ['ENSG00000148341|ENST00000372564|SH3GLB2', 'nc|ENSG00000148341|Q9NR46-2|SH3GLB2'] 103246 22009 SQSSVKKA True PC9_epitope_Rep4 833.4606811274899 833.45958993586 92.878 2 -2.2522601238062894 0.4541558636353897 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 20394 22266 EPLPLAYA True NCI_RA007_Epitope_Rep4 872.4643695255999 872.46326993586 96.585 2 -2.2525907432341814 0.45418313888085365 1.0 ['ENSG00000142619|ENST00000375460|PADI3'] 92336 22331 RQNQSNLK True PC9_epitope_Rep3 986.52574099554 986.52464993586 91.181 2 -2.25288532303615 0.45419581543340154 1.0 ['nc|ENSG00000101977|P10911|MCF2', 'nc|ENSG00000101977|P10911-4|MCF2', 'nc|ENSG00000101977|P10911-3|MCF2', 'ENSG00000101977|ENST00000519895|MCF2', 'nc|ENSG00000101977|P10911-6|MCF2', 'nc|ENSG00000101977|P10911-2|MCF2'] 129963 20960 VTNRIDTTR True PC9_epitope_Rep6 1074.57817049122 1074.5770699358602 93.412 2 -2.2530286478374277 0.45419581543340154 1.0 ['nc|ENSG00000178904|Q6ZPD9-2|DPY19L3', 'DPY19L3|p.G669Efs*7|1|0.48|ENSG00000178904|chr19:32482094-32482094|G/-|frameshift_variant', 'ENSG00000178904|ENST00000392250|DPY19L3'] 85791 24901 QLWRFLPR True H1975_Epitope_Rep2 1114.63998290214 1114.63888993586 102.35 2 -2.253179884888594 0.45419581543340154 1.0 ['ENSG00000133028|ENST00000255390|SCO1', 'ENST00000579396.1_1_17:10599052-10600824:-|nuORF'] 121050 8431 VGFLVPRK True NCI_RA007_Epitope_Rep4 914.5701720068199 914.5690699358599 39.244 2 -2.253295671921079 0.45419581543340154 1.0 ['NRSN1|p.P88R|1|0.07|ENSG00000152954|chr6:24145621-24145621|C/G|missense_variant'] 6381 18700 APRRFLLAA True PC9_epitope_Rep2 1013.6134338011298 1013.61232993586 77.301 2 -2.254736182940475 0.4542610745085436 1.0 ['ENST00000438404.5_2_21:40816571-40817638:-|nuORF', 'ENST00000358268.6_2_21:40801131-40817638:-|nuORF'] 97949 19341 SHQNMTES True NCI_RA007_Epitope_Rep5 932.3657947664801 932.36468993586 81.275 2 -2.2547938780594254 0.4542610745085436 1.0 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000493238.1_1_3:149677832-149678888:+|nuORF', 'nc|ENSG00000082996|O43567-2|RNF13'] 39412 2784 HLYQEWERE True H1975_Epitope_Rep2 1288.58364979448 1288.5820049037902 14.74 3 -2.255041260694356 0.4542776337497054 1.0 ['ENSG00000119596|ENST00000325680|YLPM1', 'YLPM1|p.K1386Nfs*44|1|0.14|ENSG00000119596|chr14:74799455-74799455|G/-|frameshift_variant'] 72792 6580 NAGIAAAY True H1975_Epitope_Rep3 749.37080349393 749.37025496793 30.265 1 -2.25547822683194 0.45428347991901186 1.0 ['ENSG00000139410|ENST00000403593|SDSL', 'SDSL|p.P141Rfs*6|1|0.24|ENSG00000139410|chr12:113434196-113434196|C/-|frameshift_variant'] 14961 6237 DYQVYRSWWLW True PC9_epitope_Rep4 1600.7462984454799 1600.7446649037902 31.037 3 -2.2555498782106294 0.45428932596306293 1.0 ['ENST00000355622.6_1_9:120474773-120474821:+|nuORF'] 34029 19395 GNLFMILLIRT True NCI_RA007_Epitope_Rep5 1289.7529640490498 1289.7518699358602 81.488 2 -2.2556577219812546 0.4542951718818627 1.0 ['OR5M1|p.C44F|1|0.83|ENSG00000255012|chr11:56613372-56613372|C/A|missense_variant'] 25686 8959 FFFFPFREEME True NCI_RA007_Epitope_Rep1 1524.674773298 1524.67366993586 38.849 2 -2.255915271460514 0.4543117300482057 1.0 ['ENST00000489613.1_1_2:234294779-234297133:+|nuORF'] 34026 18647 GNLFMILLIRT True NCI_RA007_Epitope_Rep3 1289.7529640490498 1289.7518699358602 81.582 2 -2.256671430509234 0.45431855430462864 1.0 ['OR5M1|p.C44F|1|0.83|ENSG00000255012|chr11:56613372-56613372|C/A|missense_variant'] 10246 22022 CFPHSTMF True H1975_Epitope_Rep1 968.38844478736 968.38734993586 91.602 2 -2.257005916345552 0.45431855430462864 1.0 ['ENST00000557778.1_1_14:102100909-102101767:-|nuORF'] 20494 5503 EPTNIVNVNH True NCI_RA007_Epitope_Rep1 1135.56218607391 1135.56108993586 25.477 2 -2.2572131294973943 0.45431855430462864 1.0 ['nc|ENSG00000177058|Q8NBW4-3|SLC38A9', 'ENSG00000177058|ENST00000396865|SLC38A9', 'nc|ENSG00000177058|Q8NBW4-2|SLC38A9', 'ENST00000514806.5_1_5:54965038-54993786:-|nuORF'] 105286 21771 STTMRQVS True NCI_RA007_Epitope_Rep5 908.4385657839199 908.43746993586 90.862 2 -2.257446964153502 0.45432439959723203 1.0 ['ENST00000539605.5_1_12:133331485-133331596:-|nuORF'] 15501 7709 EAQPQLLDLRI True H1975_Epitope_Rep3 1294.7245003717399 1294.7234099358602 34.636 2 -2.258187576560372 0.45434095656365486 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 87263 19155 QSRRARWFLSA True NCI_RA007_Epitope_Rep3 1376.74255047772 1376.7409049037901 83.649 3 -2.258560330305722 0.45437893654398215 1.0 ['ENST00000276925.6_1_9:22009008-22009314:-|nuORF'] 37432 23723 GWNPHLLLLL True NCI_RA007_Epitope_Rep4 1174.68626438822 1174.6851699358601 102.87 2 -2.259072051470517 0.45439062533473296 1.0 ['ENSG00000103522|ENST00000337929|IL21R'] 124052 7766 VKQNSLYS True NCI_RA007_Epitope_Rep5 937.48689587533 937.48578993586 36.569 2 -2.259242816768807 0.45439062533473296 1.0 ['ENSG00000149231|ENST00000646818|CCDC82'] 71279 19032 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 80.062 2 -2.2597010734781366 0.4544071808824002 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 117351 19080 VAARQCVP True PC9_epitope_Rep2 842.4432572415399 842.44214993586 78.756 2 -2.2603826238983102 0.4544451585261354 1.0 ['TAT|p.I244Sfs*2|1|0.13|ENSG00000198650|chr16:71571636-71571636|G/-|frameshift_variant', 'ENSG00000198650|ENST00000355962|TAT'] 101044 24548 SLTLLRKKVW True NCI_RA007_Epitope_Rep1 1242.7812274022199 1242.77959490379 101.69 3 -2.2612968822356563 0.45447242424567 1.0 ['ENST00000508678.1_1_5:14681688-14687767:+|nuORF'] 110848 25314 TKVLLALPT True PC9_epitope_Rep2 954.6113681124599 954.6108149679301 103.04 1 -2.261393297660126 0.45447826738930186 1.0 ['ENST00000508913.5_1_5:43043449-43044931:+|nuORF'] 110042 23453 THWPDHKG True PC9_epitope_Rep2 976.45151342612 976.45040993586 95.683 2 -2.261632163495001 0.4544948212889474 1.0 ['nc|ENSG00000172046|O94966|USP19', 'nc|ENSG00000172046|O94966-5|USP19', 'nc|ENSG00000172046|O94966-4|USP19', 'nc|ENSG00000172046|O94966-3|USP19', 'nc|ENSG00000172046|O94966-7|USP19', 'ENSG00000172046|ENST00000417901|USP19'] 68363 18612 LTSLRKLWLMH True NCI_RA007_Epitope_Rep5 1396.8013112238 1396.80020993586 78.403 2 -2.2619835018637082 0.4545074812299849 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B', 'LRRC4B|p.G469Afs*22|1|0.4|ENSG00000131409|chr19:50518307-50518307|C/-|frameshift_variant'] 766 6564 AAWDPEAP True H1975_Epitope_Rep2 855.3762827971899 855.37573496793 30.159 1 -2.262057518813324 0.4545074812299849 1.0 ['ENSG00000126895|ENST00000646375|AVPR2', 'nc|ENSG00000126895|P30518-2|AVPR2', 'ENST00000434679.5_1_X:153170523-153172179:+|nuORF'] 97750 19343 SHGPCVPP True H1975_Epitope_Rep2 792.35885891124 792.35776993586 80.281 2 -2.262118779561876 0.4545074812299849 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 29844 23127 FVVLIVPM True NCI_RA007_Epitope_Rep5 916.54559705176 916.54448993586 96.21 2 -2.2621244359611685 0.4545074812299849 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 106672 22218 SYAFHTPD True H1975_Epitope_Rep2 936.39774651776 936.39664993586 91.818 2 -2.262412343109635 0.4545084556972871 1.0 ['ENSG00000173020|ENST00000308595|GRK2', 'ENST00000532099.5_1_11:67048984-67051337:+|nuORF', 'ENST00000416281.6_1_11:67048455-67049666:+|nuORF'] 13959 18337 DRMGEAKAS True PC9_epitope_Rep6 963.44437944035 963.44383496793 83.175 1 -2.2624266679983465 0.4545084556972871 1.0 ['nc|ENSG00000160360|Q86YR5-4|GPSM1', 'nc|ENSG00000160360|Q86YR5|GPSM1', 'ENSG00000160360|ENST00000440944|GPSM1', 'nc|ENSG00000160360|Q86YR5-3|GPSM1'] 109182 13897 TFRQLQLFKH True NCI_RA007_Epitope_Rep2 1316.7353398389596 1316.7342499358601 58.71 2 -2.2626082036269626 0.4545142979543751 1.0 ['nc|ENSG00000128159|Q96RT7-3|TUBGCP6'] 90427 20697 RIPVKNTHR True H1975_Epitope_Rep2 1119.66250925187 1119.66140993586 85.718 2 -2.2630368241577665 0.45454156001328033 1.0 ['ENSG00000151150|ENST00000280772|ANK3'] 71278 18940 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 79.692 2 -2.263718831851214 0.4545532434429653 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 124481 25149 VLFASSHT True PC9_epitope_Rep5 860.43921740692 860.43812993586 101.88 2 -2.263809644091915 0.4545532434429653 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 71544 19620 MLCILKLASR True NCI_RA007_Epitope_Rep3 1146.6617065164999 1146.66060993586 85.578 2 -2.264744550639192 0.4546077643908969 1.0 ['RTTN|p.Q2020R|1|0.12|ENSG00000176225|chr18:70020709-70020709|T/C|missense_variant'] 88499 15651 RAAKTVAH True NCI_RA007_Epitope_Rep4 852.49298431528 852.49188993586 67.978 2 -2.2647518129451867 0.4546077643908969 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 14131 14577 DSFFGTDT True NCI_RA007_Epitope_Rep5 888.350127619 888.34902993586 62.74 2 -2.2652029922140904 0.4546350239890336 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant'] 80073 24895 PKGLPAKL True NCI_RA007_Epitope_Rep5 822.53272386894 822.53162993586 103.25 2 -2.2653502187231824 0.4546622830033092 1.0 ['ENSG00000170458|ENST00000302014|CD14'] 60972 21879 LLAFAKNL True NCI_RA007_Epitope_Rep4 888.54328855264 888.54218993586 94.848 2 -2.2655926104708906 0.45466325405069663 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 26606 10296 FKKLYFYS True NCI_RA007_Epitope_Rep2 1094.5800679841798 1094.5789699358602 44.638 2 -2.2657243103257176 0.45466325405069663 1.0 ['nc|ENSG00000283128|Q3B7I2|CNPY1', 'ENSG00000146910|ENST00000636446|CNPY1'] 65475 10845 LSFHTDYPA True PC9_epitope_Rep1 1049.48181049489 1049.48127496793 46.602 1 -2.26589185028645 0.45466909402441635 1.0 ['ENSG00000129151|ENST00000263182|BBOX1'] 114746 21774 TSVLHLRK True H1975_Epitope_Rep1 952.5817993196799 952.58070993586 90.49 2 -2.2661656230762106 0.4547090003747925 1.0 ['ENST00000253577.7_1_X:74284982-74285033:-|nuORF'] 37621 25494 HAAAPGGG True H1975_Epitope_Rep1 636.2979729068401 636.29742496793 105.66 1 -2.266222755032087 0.4547090003747925 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 130970 23982 VVIWAKEL True PC9_epitope_Rep4 956.5695033004799 956.56840993586 100.71 2 -2.266240818156888 0.4547090003747925 1.0 ['ENSG00000119714|ENST00000650645|GPR68'] 32579 19992 GHAGESHV True NCI_RA007_Epitope_Rep3 792.35146503168 792.35036993586 87.128 2 -2.266376202425195 0.4547090003747925 1.0 ['ENST00000362074.7_1_1:145273244-145273415:+|nuORF'] 28673 17098 FSSRAESFM True PC9_epitope_Rep1 1060.46478053176 1060.4636899358602 70.593 2 -2.26640612650283 0.4547090003747925 1.0 ['nc|ENSG00000099810|Q13126-7|MTAP', 'ENST00000419385.5_1_9:21815486-21862010:+|nuORF', 'nc|ENSG00000099810|Q13126-4|MTAP', 'ENSG00000099810|ENST00000644715|MTAP', 'nc|ENSG00000099810|Q13126-6|MTAP', 'nc|ENSG00000099810|Q13126-5|MTAP', 'nc|ENSG00000099810|Q13126-3|MTAP', 'nc|ENSG00000099810|Q13126-2|MTAP'] 10330 5071 CICHSTYFL True H1975_Epitope_Rep1 1085.46742338405 1085.4663299358601 24.576 2 -2.266721925937633 0.45471483948343433 1.0 ['ENST00000517490.5_1_8:87570634-87570742:+|nuORF'] 9718 18297 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 80.13 2 -2.266912139023108 0.45472651732556646 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 97758 13809 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 59.791 2 -2.2673252602291822 0.45472651732556646 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 85800 17170 QLWWRNWFWVH True PC9_epitope_Rep5 1656.8102361147198 1656.80912993586 71.065 2 -2.268072513598736 0.45482872715202005 1.0 ['ENST00000437634.1_1_2:154277901-154278186:-|nuORF'] 60971 22908 LLAFAKNL True NCI_RA007_Epitope_Rep2 888.54328855264 888.54218993586 95.515 2 -2.268417222168714 0.4548404021800816 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 108882 17846 TERWFVLK True PC9_epitope_Rep6 1077.5971150306498 1077.5960099358601 81.274 2 -2.268573633721004 0.4548404021800816 1.0 ['ENSG00000133789|ENST00000318950|SWAP70', 'ENST00000524817.5_1_11:9685687-9762009:+|nuORF', 'ENST00000534562.1_1_11:9749605-9771962:+|nuORF'] 79705 23863 PHPGVGLT True NCI_RA007_Epitope_Rep1 776.4180880395201 776.41698993586 98.708 2 -2.26901493615667 0.4548647172821397 1.0 ['ENSG00000176092|ENST00000308182|CRYBG2'] 29836 23666 FVVLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 98.714 2 -2.2693067408795518 0.4548647172821397 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 118728 18940 VEDEAETKK True NCI_RA007_Epitope_Rep2 1047.5084191655499 1047.5078749679299 78.515 1 -2.2693875581550653 0.4548647172821397 1.0 ['nc|ENSG00000099864|O75781-2|PALM', 'ENSG00000099864|ENST00000338448|PALM'] 53553 23172 KVRFKKVEF True H1975_Epitope_Rep3 1179.7128134892298 1179.7111649037902 96.763 3 -2.269439625212945 0.4548647172821397 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49'] 8209 21854 ATHSSHGP True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 90.374 2 -2.2696230327720563 0.4548647172821397 1.0 ['nc|ENSG00000204305|Q15109-3|AGER', 'nc|ENSG00000204305|Q15109-4|AGER', 'nc|ENSG00000204305|Q15109-10|AGER', 'nc|ENSG00000204305|Q15109-7|AGER', 'ENSG00000204305|ENST00000375076|AGER', 'nc|ENSG00000204305|Q15109-6|AGER'] 34385 26910 GPSYGSQN True PC9_epitope_Rep5 808.3351462612001 808.33404993586 109.95 2 -2.2697078089102174 0.4548647172821397 1.0 ['nc|ENSG00000105991|P49639-2|HOXA1', 'nc|ENSG00000105991|P49639-3|HOXA1', 'nc|ENSG00000105991|P49639|HOXA1', 'ENSG00000105991|ENST00000643460|HOXA1'] 3027 20128 AFSQRYCVCNP True PC9_epitope_Rep4 1286.5536126195 1286.5525099358601 85.557 2 -2.2698670595582677 0.4548715203426124 1.0 ['nc|ENSG00000124313|Q5JU85-3|IQSEC2', 'ENSG00000124313|ENST00000642864|IQSEC2'] 84728 16414 QHGETPPL True PC9_epitope_Rep3 877.4293809992099 877.42828993586 68.273 2 -2.2699131426447146 0.4548715203426124 1.0 ['ENST00000381346.8_1_14:68144270-68144630:-|nuORF'] 110831 26196 TKSKKGAK True PC9_epitope_Rep5 846.5287011176598 846.52760993586 106.51 2 -2.2701302956053695 0.4548715203426124 1.0 ['ENSG00000099399|ENST00000378988|MAGEB2'] 61080 4766 LLAVTFAA True NCI_RA007_Epitope_Rep5 804.47454028648 804.47344993586 25.016 2 -2.2708316798248873 0.45496300896136016 1.0 ['nc|ENSG00000128040|P20155|SPINK2'] 79638 11233 PHFACAGP True H1975_Epitope_Rep2 798.3482942275399 798.34774496793 48.249 1 -2.271134614940882 0.45497467961414517 1.0 ['ENSG00000183153|ENST00000578689|GJD3', 'nc|ENSG00000183153|Q8N144-2|GJD3'] 80053 22778 PKGKKDRE True PC9_epitope_Rep2 956.5403284305199 956.53922993586 93.104 2 -2.271376998027913 0.45497467961414517 1.0 ['nc|ENSG00000198363|Q12797-4|ASPH', 'nc|ENSG00000198363|Q12797-3|ASPH'] 73645 21042 NGKHVPRA True PC9_epitope_Rep6 877.48823328801 877.48712993586 93.758 2 -2.271562396304356 0.45497564370215726 1.0 ['ENSG00000183785|ENST00000330423|TUBA8', 'TUBA8|p.A333Cfs*88|1|0.13|ENSG00000183785|chr22:18126972-18126973|-/T|frameshift_variant'] 60783 22863 LKFSKGEI True H1975_Epitope_Rep2 920.5331177917599 920.53202993586 94.389 2 -2.2717942896306638 0.45497564370215726 1.0 ['ENSG00000105926|ENST00000222644|PALS2', 'MPP6|p.K307Efs*14|1|0.21|ENSG00000105926|chr7:24666046-24666047|-/A|frameshift_variant'] 85206 22584 QKGKRENK True PC9_epitope_Rep4 986.5621265042599 986.56102993586 95.104 2 -2.2719084754876335 0.45497660774888393 1.0 ['nc|ENSG00000230223|P0DMR3|ATXN8OS'] 49291 23660 KHLQKQEGA True PC9_epitope_Rep4 1037.5617921510898 1037.5606899358602 99.353 2 -2.271918353924156 0.45497660774888393 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.Q2344Kfs*48|2|0.43|ENSG00000091656|chr8:76853949-76853949|C/-|frameshift_variant', 'ZFHX4|p.P2910Qfs*27|1|0.24|ENSG00000091656|chr8:76855647-76855647|C/-|frameshift_variant', 'ZFHX4|p.A2982Qfs*10|1|0.33|ENSG00000091656|chr8:76855863-76855863|G/-|frameshift_variant', 'ZFHX4|p.N1257Kfs*31|1|0.25|ENSG00000091656|chr8:76849634-76849635|-/A|frameshift_variant', 'ZFHX4|p.K1442Nfs*10|1|0.42|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant'] 79805 22609 PIDDAYMG True PC9_epitope_Rep6 880.36366950816 880.36256993586 100.01 2 -2.2722413335830187 0.4549824426173347 1.0 ['ENSG00000198488|ENST00000622824|B3GNT6', 'nc|ENSG00000198488|Q6ZMB0-3|B3GNT6'] 107803 8103 TAPEKRSL True PC9_epitope_Rep4 900.5028802926399 900.50178993586 38.621 2 -2.272803858570559 0.45499411197944545 1.0 ['POU4F3|p.A282T|2|0.18|ENSG00000091010|chr5:146340271-146340271|G/A|missense_variant'] 123922 22400 VKKAVPKEDI True PC9_epitope_Rep4 1125.6757592741699 1125.67411490379 94.396 3 -2.272982407126328 0.45499411197944545 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 79706 23730 PHPGVGLT True NCI_RA007_Epitope_Rep5 776.4180880395201 776.41698993586 98.619 2 -2.273273049927388 0.4549999464731134 1.0 ['ENSG00000176092|ENST00000308182|CRYBG2'] 97752 11200 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 49.715 2 -2.2739130442380144 0.45503982187205616 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 53479 20781 KVLAPKCA True PC9_epitope_Rep4 828.4891448047999 828.48804993586 88.082 2 -2.273963271267637 0.45503982187205616 1.0 ['ENSG00000144791|ENST00000273317|LIMD1', 'ENST00000474665.1_1_3:45707185-45715939:+|nuORF'] 94304 16897 RWSWCRWWWTE True H1975_Epitope_Rep3 1680.7408362255599 1680.7397299358602 70.552 2 -2.274070001112453 0.45503982187205616 1.0 ['ENST00000348956.6_1_14:103986274-103986647:-|nuORF'] 112536 20467 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 84.792 2 -2.2742949143012456 0.45503982187205616 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 10526 23456 CPKPGAGR True NCI_RA007_Epitope_Rep4 784.4013924295599 784.40028993586 101.8 2 -2.2744823367134037 0.45503982187205616 1.0 ['ENST00000520674.5_1_5:141016607-141016847:+|nuORF'] 60974 22147 LLAFAKNL True NCI_RA007_Epitope_Rep4 888.54328855264 888.54218993586 96.051 2 -2.2745277997837445 0.4550446342559887 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 53338 23446 KTQDVLNQ True NCI_RA007_Epitope_Rep4 944.49270953176 944.49160993586 101.76 2 -2.2758186909527525 0.4550446342559887 1.0 ['SPRTN|p.L284V|1|0.16|ENSG00000010072|chr1:231352741-231352741|C/G|missense_variant'] 10275 439 CGIRLPNP True NCI_RA007_Epitope_Rep1 868.45890730568 868.45780993586 2.345 2 -2.2759136194766336 0.4550446342559887 1.0 ['MCHR1|p.S394Cfs*16|1|0.24|ENSG00000128285|chr22:40681838-40681848|GTCGGTGAAGC/-|frameshift_variant', 'ENSG00000128285|ENST00000249016|MCHR1'] 116858 5086 TYNGATSVMS True PC9_epitope_Rep6 1029.44371073401 1029.4426099358602 27.232 2 -2.276073180679402 0.4550446342559887 1.0 ['nc|ENSG00000134873|P78369-3|CLDN10', 'nc|ENSG00000134873|P78369-2|CLDN10', 'ENSG00000134873|ENST00000299339|CLDN10'] 97749 19113 SHGPCVPP True H1975_Epitope_Rep2 792.35885891124 792.35776993586 79.334 2 -2.276141792368263 0.4550446342559887 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 92383 1386 RQQRTQAHL True PC9_epitope_Rep3 1136.6162873354397 1136.6151899358601 7.6405 2 -2.276290898579423 0.4550446342559887 1.0 ['ENSG00000188959|ENST00000400613|C9orf152'] 121362 17298 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 75.924 2 -2.276339200011721 0.4550446342559887 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 67665 13824 LTFMRFAY True NCI_RA007_Epitope_Rep5 1047.52117320907 1047.5200699358602 59.849 2 -2.2764061474482515 0.4550446342559887 1.0 ['ENSG00000060762|ENST00000360961|MPC1'] 121350 16948 VGHSAGHP True H1975_Epitope_Rep2 760.36163579256 760.36052993586 70.435 2 -2.276711199459465 0.4550446342559887 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 125822 24331 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 101.04 2 -2.2767906722256384 0.4550446342559887 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 123876 7715 VKDAMQRTL True NCI_RA007_Epitope_Rep3 1060.5699143066402 1060.5688099358601 37.469 2 -2.277191472000794 0.4550465589211174 1.0 ['ENST00000548783.1_1_12:77252724-77253344:-|nuORF'] 13425 24675 DNNNGWDS True H1975_Epitope_Rep2 920.32603812948 920.32494993586 101.47 2 -2.2775934744217503 0.4550465589211174 1.0 ['ENSG00000169605|ENST00000377938|GKN1'] 5607 23756 APAAGLRSVH True PC9_epitope_Rep1 977.5406627836901 977.5401149679301 96.172 1 -2.277622359636519 0.4550465589211174 1.0 ['ENST00000487159.5_2_3:42055459-42128703:+|nuORF'] 112553 23309 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 96.943 2 -2.2777064372054636 0.4550465589211174 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 68760 18846 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 79.337 2 -2.278339316037203 0.45506014812277923 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 37427 25355 GWFVFRQQNC True H1975_Epitope_Rep3 1283.5869613531097 1283.58637496793 105.46 1 -2.2786329515585018 0.45506014812277923 1.0 ['ENST00000529807.5_1_11:77652239-77667028:-|nuORF'] 121398 21197 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 94.382 2 -2.2787908543326436 0.45506014812277923 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 7588 16175 ASHHLDGG True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 67.427 2 -2.2788891060164076 0.45506014812277923 1.0 ['ENST00000593460.1_1_19:18119032-18119587:+|nuORF'] 81828 23446 PSGLKPPGRG True PC9_epitope_Rep2 964.5454138109599 964.54430993586 95.657 2 -2.2790154960970384 0.45506014812277923 1.0 ['ENSG00000106665|ENST00000223398|CLIP2', 'nc|ENSG00000106665|Q9UDT6-2|CLIP2'] 35897 13980 GVAGRHLL True PC9_epitope_Rep2 821.4871706588499 821.4866249679301 59.046 1 -2.2790534331568533 0.45506014812277923 1.0 ['ENST00000372429.7_1_9:132637899-132641867:+|nuORF'] 90091 23896 RGQPLLEV True NCI_RA007_Epitope_Rep4 910.5236157372199 910.52250993586 103.65 2 -2.279173510635918 0.45506111004088273 1.0 ['nc|ENSG00000117407|Q5T4W7-2|ARTN'] 125273 13313 VLRMHRYR True PC9_epitope_Rep3 1129.62910094861 1129.62800993586 56.243 2 -2.2791925628431513 0.45506111004088273 1.0 ['ENSG00000112118|ENST00000596288|MCM3', 'nc|ENSG00000112118|P25205-2|MCM3'] 28986 16624 FTHRINIPRR True NCI_RA007_Epitope_Rep3 1308.7527212385999 1308.7516299358601 73.173 2 -2.2796968205898787 0.45512045291580605 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 81092 26101 PPGFLHCA True PC9_epitope_Rep5 840.39524441996 840.39414993586 106.04 2 -2.27997611415893 0.45512628424657536 1.0 ['nc|ENSG00000168509|Q6ZVN8-2|HJV', 'ENSG00000168509|ENST00000336751|HJV'] 126257 24445 VPHGAAPT True H1975_Epitope_Rep1 748.38678791124 748.38623496793 101.33 1 -2.280177839874111 0.4551379465336787 1.0 ['ENST00000559622.5_2_15:59397358-59406659:+|nuORF', 'ENST00000288207.6_1_15:59397316-59399528:+|nuORF'] 91241 23544 RLRTTITQ True PC9_epitope_Rep2 987.58252759567 987.58142993586 96.037 2 -2.280234535925342 0.4551379465336787 1.0 ['ZFHX4|p.P2614Q|1|0.19|ENSG00000091656|chr8:76854762-76854762|C/A|missense_variant'] 124700 16627 VLKDRGWR True PC9_epitope_Rep2 1028.5879473292798 1028.58684993586 69.201 2 -2.280363960572117 0.4551496083215616 1.0 ['ENSG00000111110|ENST00000228705|PPM1H'] 81159 23301 PPLEPGRR True PC9_epitope_Rep2 920.5191990631199 920.51810993586 95.112 2 -2.2804937746586376 0.4551496083215616 1.0 ['ENST00000392197.6_1_19:36206342-36206675:+|nuORF'] 30503 12579 GAHACARA True H1975_Epitope_Rep2 755.34969120987 755.3491449679301 53.48 1 -2.2807055379124312 0.4551612696102562 1.0 ['ENSG00000104825|ENST00000313582|NFKBIB', 'nc|ENSG00000104825|Q15653-2|NFKBIB', 'ENST00000509705.3_1_19:39390655-39398344:+|nuORF'] 81695 24285 PRVIPNVH True NCI_RA007_Epitope_Rep5 930.5399345077001 930.53882993586 100.84 2 -2.280706511257116 0.4551612696102562 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 59933 23893 LHLACQKG True NCI_RA007_Epitope_Rep5 868.4589073056801 868.45780993586 99.271 2 -2.2809043633589647 0.45517780132053465 1.0 ['ENSG00000105186|ENST00000306065|ANKRD27', 'SENP2-ANKRD27|1|fusion'] 30971 23082 GASVVAIDNK True NCI_RA007_Epitope_Rep4 972.52400966004 972.5234649679301 100.23 1 -2.2815505147047133 0.45517876060739015 1.0 ['nc|ENSG00000102804|Q15714-3|TSC22D1', 'ENSG00000102804|ENST00000458659|TSC22D1', 'ENST00000487881.2_1_13:45010128-45010713:-|nuORF', 'nc|ENSG00000102804|Q15714-2|TSC22D1', 'ENSG00000157514|ENST00000372383|TSC22D3', 'nc|ENSG00000157514|Q99576|TSC22D3'] 133832 22428 WLWLHDWRRR True H1975_Epitope_Rep1 1522.8058194406199 1522.80472993586 93.304 2 -2.2815634980832833 0.45517876060739015 1.0 ['nc|ENSG00000132768|Q9BQC3-3|DPH2'] 61512 8221 LLFYESDW True PC9_epitope_Rep5 1071.4913125494297 1071.49020993586 36.561 2 -2.2822052880341235 0.455195291599786 1.0 ['ENST00000517439.1_1_8:74893396-74893462:+|nuORF'] 90391 22515 RILHVRNAPS True NCI_RA007_Epitope_Rep4 1161.67307393557 1161.67141490379 97.704 3 -2.282637871623758 0.4552225230334614 1.0 ['ENSG00000087299|ENST00000267436|L2HGDH'] 59891 17943 LHHGPLCL True H1975_Epitope_Rep1 888.46399268612 888.46288993586 74.756 2 -2.2827868963385547 0.4552293106769106 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 121394 24235 VGHSAGHP True PC9_epitope_Rep5 760.36163579256 760.36052993586 98.225 2 -2.2829355458830447 0.4552293106769106 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 87209 19519 QSNHHCHA True NCI_RA007_Epitope_Rep5 932.36713217916 932.36602993586 81.966 2 -2.2829539233518097 0.4552293106769106 1.0 ['SLC30A2|p.K234Qfs*4|1|0.32|ENSG00000158014|chr1:26039903-26039904|-/G|frameshift_variant', 'nc|ENSG00000158014|Q9BRI3-1|SLC30A2', 'ENSG00000158014|ENST00000374276|SLC30A2'] 83623 15680 QDVPLGEKI True H1975_Epitope_Rep1 997.54441075145 997.54330993586 65.601 2 -2.283284109602876 0.4552458402439677 1.0 ['ENSG00000165097|ENST00000650836|KDM1B'] 10509 19491 CNYDGGDC True NCI_RA007_Epitope_Rep4 845.23200371561 845.2314549679301 84.236 1 -2.2836037131090494 0.4552496709927993 1.0 ['ENSG00000182752|ENST00000328252|PAPPA', 'ENST00000483254.1_1_9:119135964-119158892:+|nuORF'] 34027 18736 GNLFMILLIRT True NCI_RA007_Epitope_Rep3 1289.7529640490498 1289.7518699358602 81.928 2 -2.2836584946049276 0.4552496709927993 1.0 ['OR5M1|p.C44F|1|0.83|ENSG00000255012|chr11:56613372-56613372|C/A|missense_variant'] 112548 23276 TPAHHPPG True H1975_Epitope_Rep3 812.3929359208399 812.39182993586 97.177 2 -2.284107866367676 0.4552496709927993 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 25665 18037 FFDVLGNDR True H1975_Epitope_Rep3 1081.5192586327698 1081.5181699358602 75.557 2 -2.2841810215583416 0.4552496709927993 1.0 ['ENSG00000182827|ENST00000366812|ACBD3'] 16515 13919 EENWQEWRQRD True NCI_RA007_Epitope_Rep5 1574.68621737006 1574.68512993586 60.222 2 -2.2843848224683154 0.4552496709927993 1.0 ['nc|ENSG00000165113|Q5VSY0-2|GKAP1', 'ENSG00000165113|ENST00000376371|GKAP1'] 134162 24540 WRKKWNVI True NCI_RA007_Epitope_Rep3 1128.6556329662799 1128.6545299358602 106.17 2 -2.2845217756521654 0.4552496709927993 1.0 ['ENSG00000188993|ENST00000682860|LRRC66'] 137832 23383 YPFVPVFF True PC9_epitope_Rep3 1014.5214904788999 1014.52038993586 95.222 2 -2.284523220417136 0.4552496709927993 1.0 ['chr6:168585980-168598818|151|82.08|0.04|10.94|+|2|TE_info:L1ME2z,L1ME2z_dup2627,L1,LINE,donor,-,168585259,168585980|None,SMOC2|1'] 134680 22360 WWPMKAQNL True PC9_epitope_Rep4 1172.5800850675198 1172.5789899358601 94.242 2 -2.284586770955371 0.4552496709927993 1.0 ['ENST00000609439.2_2_7:45847154-45848297:+|nuORF'] 100741 17018 SLRLADRRPRR True NCI_RA007_Epitope_Rep1 1394.83309681762 1394.83198993586 70.324 2 -2.284935533304527 0.4552768980570059 1.0 ['ENST00000418115.5_1_3:49449256-49449346:-|nuORF'] 92096 21666 RPWHEYEH True NCI_RA007_Epitope_Rep5 1152.5100909313999 1152.5089899358602 90.434 2 -2.285027904010686 0.45528272615417537 1.0 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4'] 71276 18315 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 77.249 2 -2.2854792196048748 0.4553099522821133 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 112557 24066 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 99.968 2 -2.285663555316201 0.4553157799009276 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 81441 15288 PQGHSTVL True NCI_RA007_Epitope_Rep5 837.43446637965 837.43336993586 65.501 2 -2.286237899585887 0.4553216073950443 1.0 ['ENST00000361441.4_1_22:39414388-39414700:+|nuORF'] 32523 24458 GGQDGGRF True NCI_RA007_Epitope_Rep5 792.3514650316799 792.35036993586 101.55 2 -2.2867256974630292 0.45532638695735894 1.0 ['ENST00000306480.10_2_4:166024219-166034007:-|nuORF'] 101478 6607 SNQPEQFDWAI True NCI_RA007_Epitope_Rep2 1333.5938801250102 1333.59278993586 30.309 2 -2.2868581062582125 0.45532638695735894 1.0 ['nc|ENSG00000197785|Q9NVI7-3|ATAD3A', 'ENSG00000197785|ENST00000378756|ATAD3A', 'nc|ENSG00000197785|Q9NVI7|ATAD3A'] 112540 21422 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 88.636 2 -2.2871519807605796 0.45532638695735894 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 108468 6113 TEEPVPFKDIM True NCI_RA007_Epitope_Rep5 1304.6322397796798 1304.63114993586 30.193 2 -2.2872065052919957 0.45532638695735894 1.0 ['ENSG00000184305|ENST00000509176|CCSER1'] 42797 24753 IFIHVSFMLL True PC9_epitope_Rep2 1218.6834875069 1218.68238993586 100.89 2 -2.287374090283973 0.45532638695735894 1.0 ['ENST00000318037.3_1_3:196198572-196198686:-|nuORF'] 39427 17039 HMHGLAFL True NCI_RA007_Epitope_Rep3 924.4639926861199 924.46288993586 74.887 2 -2.28738666509805 0.45532638695735894 1.0 ['ENSG00000025293|ENST00000374012|PHF20'] 128225 6597 VRVPGEGASW True NCI_RA007_Epitope_Rep5 1056.53524305008 1056.5341499358601 32.034 2 -2.2874278623265223 0.45532638695735894 1.0 ['ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22'] 112555 23690 TPAHHPPG True NCI_RA007_Epitope_Rep5 812.3929359208399 812.39182993586 98.459 2 -2.2874325220549916 0.45532638695735894 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 118528 13926 VDTPELLRS True PC9_epitope_Rep2 1028.55022440788 1028.54912993586 58.845 2 -2.287498331927933 0.45532638695735894 1.0 ['nc|ENSG00000197893|Q86VF7-4|NRAP', 'nc|ENSG00000197893|Q86VF7-3|NRAP', 'ENSG00000197893|ENST00000359988|NRAP', 'nc|ENSG00000197893|Q86VF7-2|NRAP'] 110599 10554 TISVFEPIERN True H1975_Epitope_Rep1 1303.67721582615 1303.67610993586 45.55 2 -2.287510098088691 0.45532638695735894 1.0 ['ENSG00000183690|ENST00000420999|EFHC2'] 68109 22193 LTPEFLEKH True PC9_epitope_Rep4 1112.5866099165999 1112.58550993586 93.611 2 -2.287776770609889 0.4553496929890246 1.0 ['nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B'] 43238 24591 IHAVCGKN True NCI_RA007_Epitope_Rep1 840.4276071774 840.4265099358599 101.85 2 -2.287795728674042 0.4553496929890246 1.0 ['ENST00000477995.1_1_6:170176000-170181606:+|nuORF', 'nc|ENSG00000130023|Q5T6L9-4|ERMARD', 'nc|ENSG00000130023|Q5T6L9-2|ERMARD', 'nc|ENSG00000130023|Q5T6L9-3|ERMARD', 'ENSG00000130023|ENST00000366773|ERMARD'] 20395 24473 EPLPLAYA True PC9_epitope_Rep3 872.4643695255999 872.46326993586 99.472 2 -2.287838057167647 0.4553496929890246 1.0 ['ENSG00000142619|ENST00000375460|PADI3'] 121378 20823 VGHSAGHP True NCI_RA007_Epitope_Rep5 760.36163579256 760.36052993586 87.083 2 -2.2878948375873223 0.4553496929890246 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 6162 22961 APPIHMVP True PC9_epitope_Rep5 860.45784467652 860.45729496793 93.309 1 -2.287988607104552 0.45536421007594396 1.0 ['ENST00000263857.10_1_2:86252617-86252839:-|nuORF'] 88605 24609 RALQPVRKKFS True NCI_RA007_Epitope_Rep5 1328.80408810512 1328.80298993586 102.13 2 -2.28829001710995 0.45536421007594396 1.0 ['nc|ENSG814|P63133|ERVK-8_pol'] 125020 22677 VLPAAQLR True PC9_epitope_Rep3 866.5337864981 866.53268993586 92.499 2 -2.2883354729374545 0.45536421007594396 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 124238 25054 VLAWVKKR True NCI_RA007_Epitope_Rep5 998.6389202729799 998.6378299358599 103.87 2 -2.288351036820186 0.45536421007594396 1.0 ['nc|ENSG00000182831|Q14CZ0-2|HAPSTR1', 'ENSG00000182831|ENST00000327827|HAPSTR1'] 81142 20270 PPIMLIGH True PC9_epitope_Rep6 876.4891448047999 876.48804993586 90.661 2 -2.2884673783480523 0.45536421007594396 1.0 ['ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 16972 21050 EGHSACFA True H1975_Epitope_Rep3 820.31738802208 820.31628993586 87.921 2 -2.2887507241043203 0.45536421007594396 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 49064 24688 KFRARSLK True NCI_RA007_Epitope_Rep5 1004.6243328379999 1004.62322993586 102.45 2 -2.288762061674355 0.45536421007594396 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 102545 25037 SQAKVIYG True PC9_epitope_Rep3 864.4705175351999 864.46942993586 101.65 2 -2.2889370093862627 0.45536421007594396 1.0 ['ENSG00000136383|ENST00000258888|ALPK3'] 97754 11726 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 51.758 2 -2.2891586078210153 0.4553700356184018 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 112541 21535 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 89.095 2 -2.289359368206801 0.4553758610362384 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 72214 23151 MRVKEETH True H1975_Epitope_Rep2 1028.50731405008 1028.5062099358602 95.513 2 -2.2895340848188757 0.45539238231739276 1.0 ['ENSG00000151150|ENST00000280772|ANK3', 'ANK3|p.G3195Afs*42|1|0.17|ENSG00000151150|chr10:60071297-60071297|C/-|frameshift_variant'] 103383 23733 SQVSPKLGLLR True NCI_RA007_Epitope_Rep3 1196.7241064489199 1196.72300993586 102.88 2 -2.2898800773926506 0.4553933365420611 1.0 ['nc|ENSG00000141446|Q5FWF5-2|ESCO1', 'ENSG00000141446|ENST00000269214|ESCO1'] 53554 23268 KVRFKKVEF True H1975_Epitope_Rep3 1179.7128134892298 1179.7111649037902 97.145 3 -2.2900095291738354 0.4553933365420611 1.0 ['nc|ENSG00000137821|Q8IUZ0-2|LRRC49'] 115082 24177 TTTMSGGG True H1975_Epitope_Rep2 710.2905045678999 710.28995496793 99.53 1 -2.2901146231485443 0.4553991614614529 1.0 ['RING1|p.E173Gfs*21|1|0.29|ENSG00000204227|chr6:33211212-33211213|-/G|frameshift_variant'] 90978 9497 RLIEDLWYYWL True NCI_RA007_Epitope_Rep1 1568.80275069244 1568.80164993586 40.936 2 -2.29060187557114 0.45543802607514516 1.0 ['ENST00000507114.1_1_17:48777854-48785015:-|nuORF'] 97755 12758 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 55.744 2 -2.2906202196349703 0.45543802607514516 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 40532 24690 HSPPSTLV True H1975_Epitope_Rep2 836.4392174069201 836.43812993586 101.53 2 -2.290680400385965 0.45543802607514516 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 33131 19847 GKPKTTTT True PC9_epitope_Rep6 832.46543215476 832.46432993586 89.002 2 -2.2908374953976574 0.45544385026737966 1.0 ['ENST00000352536.7_1_6:117593658-117593937:+|nuORF'] 130765 11005 VVDTVLAL True NCI_RA007_Epitope_Rep3 828.4956696538799 828.49456993586 50.379 2 -2.2910165632433195 0.45544967433503386 1.0 ['nc|ENSG00000172508|A5YM72|CARNS1', 'nc|ENSG00000172508|A5YM72-4|CARNS1', 'ENSG00000172508|ENST00000687366|CARNS1', 'nc|ENSG00000172508|A5YM72-3|CARNS1'] 42798 24023 IFIHVSFMLL True PC9_epitope_Rep4 1218.6834875069 1218.68238993586 100.87 2 -2.291156033777606 0.45545062725260155 1.0 ['ENST00000318037.3_1_3:196198572-196198686:-|nuORF'] 49279 20434 KHIARLSQKQ True NCI_RA007_Epitope_Rep4 1207.71493874755 1207.71328490379 88.477 3 -2.2912340204697053 0.45545062725260155 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G', 'PIK3C2G|p.K900Rfs*29|1|0.36|ENSG00000139144|chr12:18491461-18491462|AG/-|frameshift_variant', 'PIK3C2G|p.G1094Efs*4|1|0.24|ENSG00000139144|chr12:18505418-18505418|G/-|frameshift_variant'] 79515 22490 PGQQGHTP True NCI_RA007_Epitope_Rep4 820.3827651599601 820.38166993586 97.595 2 -2.291515571623007 0.455455391229027 1.0 ['ENSG00000182795|ENST00000359470|C1orf116'] 80091 17477 PKGQQGVR True H1975_Epitope_Rep2 868.4878989348398 868.48680993586 72.515 2 -2.291547509480224 0.455455391229027 1.0 ['ENSG00000049089|ENST00000372748|COL9A2', 'ENST00000427563.1_1_1:40768460-40770015:-|nuORF', 'ENST00000482722.5_1_1:40766856-40777859:-|nuORF'] 4619 16828 ALAPDPYY True NCI_RA007_Epitope_Rep1 908.4279840168801 908.42688993586 69.587 2 -2.2915582750795696 0.455455391229027 1.0 ['ENST00000221859.8_1_19:36605990-36606173:-|nuORF'] 82538 24061 PVFRITLPVLA True PC9_epitope_Rep1 1224.7594293284799 1224.75832993586 97.361 2 -2.2916222362205665 0.455455391229027 1.0 ['ENSG00000174951|ENST00000645652|FUT1'] 71464 12418 MKFILWRRFRW True H1975_Epitope_Rep3 1637.9129273614499 1637.9118299358602 52.955 2 -2.2919120265479127 0.455455391229027 1.0 ['nc|ENSG00000135636|O75923-3|DYSF', 'nc|ENSG00000135636|O75923-9|DYSF', 'nc|ENSG00000135636|O75923|DYSF', 'nc|ENSG00000135636|O75923-14|DYSF', 'nc|ENSG00000135636|O75923-6|DYSF', 'nc|ENSG00000135636|O75923-12|DYSF', 'nc|ENSG00000135636|O75923-5|DYSF', 'nc|ENSG00000135636|O75923-11|DYSF', 'nc|ENSG00000135636|O75923-4|DYSF', 'nc|ENSG00000135636|O75923-10|DYSF', 'nc|ENSG00000135636|O75923-2|DYSF', 'nc|ENSG00000135636|O75923-8|DYSF', 'nc|ENSG00000135636|O75923-7|DYSF', 'ENSG00000135636|ENST00000410020|DYSF'] 137040 18882 YKTFLIWVLI True NCI_RA007_Epitope_Rep3 1294.76893138302 1294.7678299358602 82.559 2 -2.2920236520172 0.455455391229027 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 62915 21337 LMWIIKHF True NCI_RA007_Epitope_Rep4 1086.60484326338 1086.6037499358602 92.49 2 -2.29216293844845 0.455455391229027 1.0 ['ENST00000518667.1_1_8:66643803-66660021:-|nuORF'] 33955 15318 GNCGKSKR True NCI_RA007_Epitope_Rep3 848.4286698065599 848.42756993586 67.812 2 -2.292386201082151 0.455455391229027 1.0 ['ENST00000476941.5_1_3:142524902-142525013:+|nuORF'] 60970 22774 LLAFAKNL True NCI_RA007_Epitope_Rep2 888.54328855264 888.54218993586 94.836 2 -2.2924324942507077 0.455455391229027 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 55406 13047 LATAKGGK True H1975_Epitope_Rep3 744.4493881678 744.4488349679301 55.426 1 -2.292647950047456 0.455455391229027 1.0 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12', 'NUDT12|p.L97F|1|0.41|ENSG00000112874|chr5:103559384-103559384|T/A|missense_variant'] 68759 18753 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 78.961 2 -2.2929290179064195 0.4554612143636247 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 113612 14031 TRCGDGGK True NCI_RA007_Epitope_Rep5 792.3548361599599 792.35372993586 60.661 2 -2.2931685227067438 0.4554670373736834 1.0 ['ENSG00000149256|ENST00000278550|TENM4'] 124321 24160 VLDPYLGFRTH True PC9_epitope_Rep2 1316.6877209401998 1316.68606490379 98.458 3 -2.293461636919005 0.4554679897772598 1.0 ['ENST00000498738.1_1_19:55853250-55853415:+|nuORF', 'nc|ENSG00000133247|Q86Y97-2|KMT5C', 'ENST00000589338.5_1_19:55853250-55854220:+|nuORF', 'ENSG00000133247|ENST00000255613|KMT5C'] 98989 17392 SKKKKKKKSG True H1975_Epitope_Rep3 1145.7608263108098 1145.76027496793 72.57 1 -2.2934889522750983 0.4554679897772598 1.0 ['ENST00000261798.9_1_5:148872814-148873015:-|nuORF'] 55555 9374 LCDLASPTA True PC9_epitope_Rep5 889.42151873745 889.4209649679301 41.011 1 -2.294137357199619 0.45548450565666504 1.0 ['nc|ENSG00000164944|Q69YN4-3|VIRMA', 'nc|ENSG00000164944|Q69YN4-2|VIRMA', 'ENSG00000164944|ENST00000297591|VIRMA', 'ENST00000521080.5_1_8:95511544-95524374:-|nuORF'] 42736 5020 IFDMKKWDQFY True PC9_epitope_Rep6 1519.71697246315 1519.7153249037901 26.934 3 -2.294384914979288 0.455511714197115 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7', 'UGT2B10|p.N227D|2|0.16|ENSG00000109181|chr4:68816698-68816698|A/G|missense_variant', 'nc|ENSG00000156096|P06133-3|UGT2B4', 'nc|ENSG00000156096|P06133-2|UGT2B4', 'ENSG00000156096|ENST00000305107|UGT2B4'] 58742 18667 LFLLPIRE True H1975_Epitope_Rep3 999.61170246563 999.61060993586 78.277 2 -2.29558952189596 0.4555350020850486 1.0 ['nc|ENSG00000176438|Q6ZMZ3-2|SYNE3', 'ENSG00000176438|ENST00000682763|SYNE3'] 41399 5609 IARFMAFW True PC9_epitope_Rep6 1040.5265929426798 1040.5254899358602 29.646 2 -2.2956451684536976 0.4555350020850486 1.0 ['nc|ENSG00000137672|Q9Y210-2|TRPC6', 'nc|ENSG00000137672|Q9Y210-3|TRPC6', 'ENSG00000137672|ENST00000344327|TRPC6'] 90639 26569 RKKLLEHK True NCI_RA007_Epitope_Rep1 1050.6661976499797 1050.66510993586 110.02 2 -2.2959075602467043 0.4555350020850486 1.0 ['ENSG00000100519|ENST00000445930|PSMC6', 'ENST00000554952.5_1_14:53173937-53176322:+|nuORF', 'ENST00000458604.6_1_14:53173937-53175208:+|nuORF'] 91122 20457 RLNIAIFF True NCI_RA007_Epitope_Rep4 992.58073669052 992.57962993586 88.591 2 -2.295979145300175 0.4555350020850486 1.0 ['ENSG00000170417|ENST00000412401|TMEM182'] 97161 12267 SFGDEHFAE True NCI_RA007_Epitope_Rep5 1037.4090394774498 1037.40847496793 53.834 1 -2.2963304081103715 0.4555408237457765 1.0 ['ENSG00000166133|ENST00000315616|RPUSD2', 'nc|ENSG00000166133|Q8IZ73-2|RPUSD2'] 134152 15588 WRGTLGRR True NCI_RA007_Epitope_Rep5 1000.5678805910399 1000.56678993586 66.666 2 -2.297857914332268 0.4555737301816393 1.0 ['nc|ENSG00000197879|O00159-2|MYO1C', 'nc|ENSG00000197879|O00159-3|MYO1C', 'ENSG00000197879|ENST00000648651|MYO1C'] 93399 17444 RRWRTVMGTF True NCI_RA007_Epitope_Rep5 1308.6873441007199 1308.6862499358601 73.883 2 -2.2981903897722913 0.4555737301816393 1.0 ['ENST00000482160.5_1_X:109943921-110005983:-|nuORF'] 26971 18585 FLKIWDRW True NCI_RA007_Epitope_Rep4 1162.6287495120998 1162.62709490379 80.395 3 -2.2988313533376603 0.4555737301816393 1.0 ['ENST00000494268.1_1_X:11778342-11782058:+|nuORF'] 109397 20473 TGPHCPLP True NCI_RA007_Epitope_Rep5 820.39015903952 820.38906993586 85.692 2 -2.2990917897857206 0.4555737301816393 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E'] 69639 15615 LVVGPQAL True PC9_epitope_Rep6 795.4854393233499 795.48434993586 72.267 2 -2.299165465979304 0.4555737301816393 1.0 ['ENSG00000119431|ENST00000374180|HDHD3'] 30668 10148 GALHTPPI True H1975_Epitope_Rep3 804.4493881678 804.44828993586 44.078 2 -2.299173289973499 0.4555737301816393 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 38232 9602 HEWAGGGG True PC9_epitope_Rep3 769.3143512469697 769.3138049679301 41.886 1 -2.299361027502299 0.4555737301816393 1.0 ['ENSG00000171094|ENST00000389048|ALK'] 90838 23331 RKVLDLRRW True PC9_epitope_Rep6 1240.7516586094398 1240.75056993586 102.84 2 -2.2996150238500523 0.4555737301816393 1.0 ['ENSG00000134897|ENST00000257336|BIVM'] 6906 18455 AQKLSEIHK True NCI_RA007_Epitope_Rep1 1052.59784330664 1052.59674993586 75.926 2 -2.300059712033493 0.4555737301816393 1.0 ['ENSG00000174607|ENST00000310836|UGT8'] 24282 24102 FAALKQFA True NCI_RA007_Epitope_Rep2 894.4963383602199 894.49524993586 101.25 2 -2.3000953267889677 0.4555737301816393 1.0 ['ENSG00000215045|ENST00000457091|GRID2IP'] 71548 18712 MLCRKKPIT True NCI_RA007_Epitope_Rep4 1088.6198417045198 1088.61874993586 80.954 2 -2.3002313736492637 0.4555737301816393 1.0 ['CILP|p.R572C|1|0.25|ENSG00000138615|chr15:65198572-65198572|G/A|missense_variant'] 88093 11807 QVVQRWKR True PC9_epitope_Rep4 1098.6410455312998 1098.6399499358602 53.183 2 -2.300497248224143 0.4555737301816393 1.0 ['ENST00000342992.10_3_2:179584396-179584768:-|nuORF'] 41152 26737 HYRKVHEG True H1975_Epitope_Rep1 1024.5202616922797 1024.5191699358602 111.34 2 -2.3008441407621323 0.4555737301816393 1.0 ['ENST00000527755.5_1_11:119003111-119005205:+|nuORF', 'ENSG00000172273|ENST00000350777|HINFP', 'ENST00000532860.1_1_11:119003556-119003957:+|nuORF', 'nc|ENSG00000172273|Q9BQA5-2|HINFP'] 103825 19094 SRHQGRPR True NCI_RA007_Epitope_Rep4 992.5376430919199 992.53654993586 82.594 2 -2.30114521024957 0.4555795505569929 1.0 ['ENST00000486499.1_1_16:31094827-31095232:-|nuORF'] 66333 14818 LSQPEVAAH True PC9_epitope_Rep1 950.4821448480598 950.48159496793 61.818 1 -2.301788468179236 0.45560188154800085 1.0 ['nc|ENSG00000154358|Q5VST9|OBSCN', 'nc|ENSG00000154358|Q5VST9-2|OBSCN', 'nc|ENSG00000154358|Q5VST9-6|OBSCN', 'ENSG00000154358|ENST00000680850|OBSCN', 'nc|ENSG00000154358|Q5VST9-3|OBSCN'] 72859 24354 NAPHSQGE True PC9_epitope_Rep1 838.35694433494 838.35584993586 98.507 2 -2.301850881148913 0.45560188154800085 1.0 ['nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C', 'ENSG00000074211|ENST00000382599|PPP2R2C'] 27369 19205 FMPSPLHP True NCI_RA007_Epitope_Rep5 924.4527592960799 924.45166993586 80.739 2 -2.302242531628205 0.4556028308139659 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'ENST00000534210.6_1_11:6559916-6579528:+|nuORF'] 91778 18521 RPKVCVDL True PC9_epitope_Rep6 928.5164221817998 928.51532993586 83.882 2 -2.302343087395235 0.4556028308139659 1.0 ['nc|ENSG00000152332|Q8TAS1-3|UHMK1'] 117267 15019 VAAAAPARQP True PC9_epitope_Rep2 950.52976374682 950.52866993586 63.023 2 -2.3032921580120043 0.4556173169428113 1.0 ['ENST00000517310.5_1_17:45401201-45403631:+|nuORF'] 97948 16423 SHQNMTES True NCI_RA007_Epitope_Rep5 932.3657947664801 932.36468993586 69.926 2 -2.3034645934893256 0.4556173169428113 1.0 ['ENSG00000082996|ENST00000392894|RNF13', 'ENST00000493238.1_1_3:149677832-149678888:+|nuORF', 'nc|ENSG00000082996|O43567-2|RNF13'] 124043 14711 VKPVILLIPQ True NCI_RA007_Epitope_Rep1 1118.7427166351797 1118.74217496793 61.278 1 -2.3035434336084104 0.4556173169428113 1.0 ['ENSG00000051341|ENST00000264233|POLQ', 'nc|ENSG00000051341|O75417-2|POLQ', 'POLQ|p.S1786Ifs*30|1|0.19|ENSG00000051341|chr3:121487574-121487574|C/-|frameshift_variant'] 67755 23036 LTGSVPVHAKT True PC9_epitope_Rep6 1108.6240580544797 1108.62296993586 101.71 2 -2.303667976463926 0.4556173169428113 1.0 ['ENSG00000011376|ENST00000645846|LARS2', 'ENST00000467936.5_1_3:45542057-45579920:+|nuORF'] 118925 11261 VEERAENF True NCI_RA007_Epitope_Rep1 992.4563240230399 992.45522993586 47.788 2 -2.3039391284508923 0.4556173169428113 1.0 ['ENSG00000179008|ENST00000321731|C14orf39'] 97760 15951 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 68.081 2 -2.3039410461401197 0.4556173169428113 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 62237 7271 LLQAGTPH True H1975_Epitope_Rep3 835.45520182423 835.45410993586 32.942 2 -2.3042893080147895 0.4556173169428113 1.0 ['nc|ENSG00000183853|Q96J84-2|KIRREL1', 'ENSG00000183853|ENST00000359209|KIRREL1', 'KIRREL-PYHIN1|2|fusion', 'KIRREL-PYHIN1|1|fusion'] 48646 18550 KEKLRLNQSPP True H1975_Epitope_Rep2 1308.75138382592 1308.75028993586 76.977 2 -2.3045540479530793 0.4556173169428113 1.0 ['ENST00000452439.1_1_19:50016657-50027781:+|nuORF'] 136826 17619 YITSRTQF True PC9_epitope_Rep3 1014.5134449763399 1014.51234993586 72.958 2 -2.3051126586343678 0.45564546299958314 1.0 ['ENSG00000197122|ENST00000373578|SRC', 'nc|ENSG00000197122|P12931-2|SRC', 'nc|ENSG00000197122|P12931-3|SRC'] 72150 3493 MRGCLAHM True PC9_epitope_Rep5 917.4033836588499 917.40228993586 18.51 2 -2.3051130538478595 0.45564546299958314 1.0 ['ENSG00000179399|ENST00000377067|GPC5'] 21044 20276 ERDFNAPSL True PC9_epitope_Rep5 1047.49852318819 1047.49742993586 83.042 2 -2.3051583831506974 0.45564546299958314 1.0 ['FIZ1|p.A241S|1|0.24|ENSG00000179943|chr19:55593220-55593220|C/A|missense_variant'] 52119 23934 KLRNEKHH True PC9_epitope_Rep2 1060.58900995844 1060.5879099358601 97.543 2 -2.3053821902573124 0.45565710010154453 1.0 ['NFX1|p.Q243Tfs*43|1|0.39|ENSG00000086102|chr9:33295119-33295120|-/T|frameshift_variant', 'nc|ENSG00000086102|Q12986-3|NFX1', 'nc|ENSG00000086102|Q12986-2|NFX1', 'NFX1-ACO1|1|fusion', 'ENST00000379521.8_2_9:33290558-33364805:+|nuORF', 'ENSG00000086102|ENST00000379540|NFX1'] 68747 14734 LVDMAKKL True H1975_Epitope_Rep1 916.54157430048 916.54046993586 61.896 2 -2.3057073600838085 0.45565710010154453 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 45168 20691 IRDNYFSLP True H1975_Epitope_Rep3 1123.56620882519 1123.5651099358602 86.453 2 -2.3060348392878938 0.45566291846594553 1.0 ['ENSG00000066739|ENST00000359933|ATG2B', 'ENST00000261834.9_1_14:96756535-96777546:-|nuORF'] 121916 6857 VGPPAGPR True NCI_RA007_Epitope_Rep4 749.41842239269 749.41732993586 32.996 2 -2.306813240761956 0.45567942537704287 1.0 ['ENST00000348335.6_1_17:3788988-3796337:-|nuORF'] 124595 24135 VLHGGSPC True PC9_epitope_Rep3 768.35885891124 768.35776993586 98.119 2 -2.306894121946956 0.4556910612554645 1.0 ['ENST00000569796.1_1_16:2281646-2281928:+|nuORF'] 92985 23257 RRQRQRQW True PC9_epitope_Rep4 1212.6700542437998 1212.6689499358602 97.709 2 -2.3070737267853256 0.4556910612554645 1.0 ['ENST00000247706.3_1_19:17411946-17414055:-|nuORF'] 54954 23023 LAHHVRQG True PC9_epitope_Rep6 916.4991323248801 916.49802993586 101.66 2 -2.3071594548938164 0.4556920084223127 1.0 ['ENSG00000197181|ENST00000356766|PIWIL2', 'ENST00000519884.1_1_8:22210459-22213015:+|nuORF'] 12426 24739 DKKEILKK True NCI_RA007_Epitope_Rep3 1000.6280808057599 1000.62698993586 106.98 2 -2.307293503165112 0.4556920084223127 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'nc|ENSG00000048649|Q96T23-3|RSF1'] 124382 23204 VLEDLLVL True PC9_epitope_Rep1 912.55318453 912.55208993586 94.051 2 -2.308116707271097 0.4557094609037664 1.0 ['ENSG00000186191|ENST00000375483|BPIFB4', 'nc|ENSG00000186191|P59827-2|BPIFB4'] 90497 12340 RKAGVAHS True NCI_RA007_Epitope_Rep4 824.461684187 824.46058993586 54.465 2 -2.3082147471465944 0.4557094609037664 1.0 ['MED15|p.V609Cfs*38|1|0.2|ENSG00000099917|chr22:20584875-20584875|G/-|frameshift_variant', 'MED15|p.Q615Afs*53|1|0.11|ENSG00000099917|chr22:20584891-20584892|-/A|frameshift_variant', 'MED15|p.A683Gfs*30|1|0.14|ENSG00000099917|chr22:20585181-20585182|-/G|frameshift_variant', 'ENSG00000099917|ENST00000263205|MED15', 'nc|ENSG00000099917|Q96RN5-3|MED15', 'nc|ENSG00000099917|Q96RN5-2|MED15'] 70165 7773 LYLFNWIWRYH True PC9_epitope_Rep5 1609.81940381609 1609.81774490379 34.842 3 -2.308299547489582 0.4557094609037664 1.0 ['nc|ENSG00000105438|P24390-2|KDELR1', 'ENSG00000105438|ENST00000330720|KDELR1'] 25748 21115 FFPPFLRVF True NCI_RA007_Epitope_Rep2 1168.64333694708 1168.64222993586 87.34 2 -2.308491905701033 0.45571527814888046 1.0 ['ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 136070 13449 YFYIWPFSR True NCI_RA007_Epitope_Rep5 1277.6233297784897 1277.62222993586 58.417 2 -2.3085509338558627 0.4557210952696492 1.0 ['ENSG00000155249|ENST00000641172|OR4K1'] 92554 16683 RRAPFGRK True NCI_RA007_Epitope_Rep3 986.5886160356198 986.58750993586 73.433 2 -2.3092179431315527 0.45573759979479944 1.0 ['chr17:82237893-82238811|253|18.4|0.76|4.59|+|1|SLC16A3,SLC16A3|1'] 38537 23361 HHEGLIRLI True PC9_epitope_Rep6 1086.62981214126 1086.6287099358601 102.96 2 -2.3094998071613886 0.4557434165526676 1.0 ['ENSG00000133789|ENST00000318950|SWAP70'] 26881 13788 FLFLIVRW True NCI_RA007_Epitope_Rep5 1092.64842232752 1092.6473299358602 59.711 2 -2.310028296863582 0.4557453084255974 1.0 ['ENST00000471405.5_1_7:135366313-135386730:-|nuORF'] 113055 14683 TPVPPVKE True PC9_epitope_Rep5 865.49091862661 865.48982993586 61.483 2 -2.310145135715606 0.4557453084255974 1.0 ['CNGB3|p.A169P|1|0.32|ENSG00000170289|chr8:86668157-86668157|C/G|missense_variant'] 54953 24207 LAHHVRQG True PC9_epitope_Rep4 916.4991323248801 916.49802993586 101.59 2 -2.310154865555956 0.4557453084255974 1.0 ['ENSG00000197181|ENST00000356766|PIWIL2', 'ENST00000519884.1_1_8:22210459-22213015:+|nuORF'] 87492 20912 QTGGTGHR True H1975_Epitope_Rep1 812.3889131695599 812.38780993586 86.882 2 -2.3101894448722256 0.4557453084255974 1.0 ['PDE1C|p.Q465H|1|0.23|ENSG00000154678|chr7:31824878-31824878|C/A|missense_variant'] 71277 18737 MGYAVAPH True NCI_RA007_Epitope_Rep5 844.3901590395199 844.38906993586 78.895 2 -2.3102222369892846 0.4557511247902707 1.0 ['nc|ENSG00000070614|P52848-3|NDST1', 'ENSG00000070614|ENST00000261797|NDST1', 'nc|ENSG00000070614|P52848-2|NDST1', 'nc|ENSG00000138653|Q9H3R1-2|NDST4', 'nc|ENSG00000164100|O95803-3|NDST3', 'ENSG00000164100|ENST00000296499|NDST3', 'ENSG00000138653|ENST00000264363|NDST4'] 3052 24156 AFYRRRQLMH True PC9_epitope_Rep4 1376.7247922386 1376.7236899358602 101.39 2 -2.3104170402159117 0.4557520705316591 1.0 ['nc|ENSG00000071282|Q9NZU5-2|LMCD1', 'ENSG00000071282|ENST00000157600|LMCD1'] 118225 19273 VAYKFRLV True PC9_epitope_Rep1 994.5963867546599 994.59528993586 78.937 2 -2.3105584284843124 0.4557520705316591 1.0 ['ENSG00000184984|ENST00000383263|CHRM5'] 59777 24900 LHAAAAAA True PC9_epitope_Rep3 694.37622322754 694.3756749679301 101.15 1 -2.3107742896567207 0.45575788663759936 1.0 ['ENST00000338353.3_1_1:166135560-166136198:-|nuORF', 'ENST00000538366.5_1_1:170010937-170043656:-|nuORF', 'ENSG00000125816|ENST00000351817|NKX2-4'] 37625 25478 HAAAPGGG True H1975_Epitope_Rep3 636.2979729068401 636.29742496793 106.01 1 -2.310944816583961 0.455769518476565 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 121368 22913 VGHSAGHP True NCI_RA007_Epitope_Rep3 760.36163579256 760.36052993586 99.591 2 -2.3109690066217072 0.455769518476565 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 97753 11458 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 50.721 2 -2.311366408037758 0.45578114981833723 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 81091 21126 PPGFGSIS True PC9_epitope_Rep5 760.3755545212 760.37444993586 86.321 2 -2.311514592974749 0.45578114981833723 1.0 ['nc|ENSG00000124789|P49790-2|NUP153', 'ENSG00000124789|ENST00000262077|NUP153', 'nc|ENSG00000124789|P49790-3|NUP153'] 122495 4958 VGSRPIKLRK True PC9_epitope_Rep3 1152.74551059984 1152.7444099358602 24.165 2 -2.312287144078838 0.45584039495196677 1.0 ['nc|ENSG00000126254|Q9BTD8-4|RBM42', 'nc|ENSG00000126254|Q9BTD8-2|RBM42', 'nc|ENSG00000126254|Q9BTD8-3|RBM42', 'ENSG00000126254|ENST00000262633|RBM42'] 98956 23719 SKEKKVVK True NCI_RA007_Epitope_Rep3 944.6018660579199 944.60076993586 102.83 2 -2.3126066409844546 0.45584605686322693 1.0 ['ENSG00000135837|ENST00000367607|CEP350'] 95916 10137 SDVERLER True NCI_RA007_Epitope_Rep2 1002.5094222250599 1002.50832993586 44.019 2 -2.3129364768097385 0.45584605686322693 1.0 ['ENSG00000168397|ENST00000404914|ATG4B', 'nc|ENSG00000168397|Q9Y4P1-4|ATG4B', 'ENST00000494465.5_1_2:242611409-242611676:+|nuORF', 'ENST00000475693.1_1_2:242607884-242611676:+|nuORF'] 109340 4634 TGHPPGPT True PC9_epitope_Rep6 762.36605246666 762.36494993586 25.138 2 -2.312937592533487 0.45584605686322693 1.0 ['nc|ENSG00000120049|Q9NS61-2|KCNIP2', 'ENSG00000120049|ENST00000356640|KCNIP2', 'nc|ENSG00000120049|Q9NS61-6|KCNIP2'] 124765 22952 VLKNFAFA True NCI_RA007_Epitope_Rep5 908.5119884243599 908.51088993586 95.51 2 -2.313007819530321 0.45584605686322693 1.0 ['ENST00000468917.1_1_22:20103119-20104069:-|nuORF', 'ENST00000494641.1_1_22:20103119-20103621:-|nuORF'] 79938 12262 PIREKEVT True PC9_epitope_Rep5 970.5447451046199 970.54364993586 52.154 2 -2.3130735546469534 0.45584605686322693 1.0 ['ENSG00000102302|ENST00000375135|FGD1'] 111015 24672 TLDKKLEH True PC9_epitope_Rep4 982.54474510462 982.54364993586 103.39 2 -2.313251231686086 0.45584605686322693 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'ENST00000586052.5_1_17:76423133-76435249:-|nuORF'] 64236 19006 LQKLQQKAHQ True NCI_RA007_Epitope_Rep3 1220.69895433024 1220.6978499358602 83.043 2 -2.313643918664298 0.45584605686322693 1.0 ['JMY|p.R607H|1|0.21|ENSG00000152409|chr5:79300802-79300802|G/A|missense_variant'] 39311 18834 HLRPHHPD True PC9_epitope_Rep4 1007.5049459813101 1007.50384993586 80.532 2 -2.3136954029674404 0.45584605686322693 1.0 ['ENSG00000155903|ENST00000286364|RASA2', 'nc|ENSG00000155903|Q15283|RASA2'] 81403 24026 PPVPVKKS True PC9_epitope_Rep2 850.5276384885 850.52654993586 97.912 2 -2.313913440965786 0.45584605686322693 1.0 ['SASH1|p.A989V|1|0.16|ENSG00000111961|chr6:148544436-148544436|C/T|missense_variant'] 114781 22300 TTAMTSTP True H1975_Epitope_Rep2 808.36366950816 808.36256993586 92.159 2 -2.314181280781983 0.45584605686322693 1.0 ['ENSG00000169894|ENST00000379458|MUC3A', 'nc|ENSG00000169894|Q02505-2|MUC3A', 'nc|ENSG00000169894|Q02505-3|MUC3A', 'nc|ENSG00000169894|Q02505-4|MUC3A', 'nc|ENSG00000169894|Q02505-5|MUC3A', 'MUC3A|p.S2662Ffs*13|3|0.16|ENSG00000169894|chr7:100959764-100959764|C/-|frameshift_variant', 'MUC3A|p.T2783Hfs*2|1|0.21|ENSG00000169894|chr7:100960120-100960121|-/C|frameshift_variant'] 36851 8492 GVPTPIWA True PC9_epitope_Rep3 839.45413919507 839.45359496793 37.624 1 -2.314420760647214 0.45584605686322693 1.0 ['ENST00000580483.5_1_18:10525983-10526091:+|nuORF'] 52698 26259 KQKIQNNKNH True PC9_epitope_Rep4 1250.68436689526 1250.6832699358602 111.34 2 -2.3144460213643563 0.45584605686322693 1.0 ['ENSG00000180346|ENST00000603357|TIGD2'] 125248 23240 VLRDTRPA True PC9_epitope_Rep3 926.5297637468199 926.5292149679301 94.667 1 -2.3148028818377884 0.45587323973759003 1.0 ['ENSG00000167191|ENST00000300571|GPRC5B', 'nc|ENSG00000167191|Q9NZH0-2|GPRC5B'] 83444 4246 QDASSFRL True PC9_epitope_Rep2 922.45084471978 922.44974993586 21.662 2 -2.315098405708266 0.4558799961537229 1.0 ['nc|ENSG00000198363|Q12797-10|ASPH', 'ENSG00000198363|ENST00000379454|ASPH'] 78918 22447 PFCLKVSK True PC9_epitope_Rep2 920.5153595526399 920.5142699358599 91.831 2 -2.315366513025304 0.4558799961537229 1.0 ['ENSG00000056277|ENST00000370978|ZNF280C'] 59894 18138 LHHGPLCL True H1975_Epitope_Rep3 888.46399268612 888.46288993586 76.006 2 -2.3154344780025387 0.4558799961537229 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 52634 16718 KQEEVLRK True NCI_RA007_Epitope_Rep3 1028.5978433066398 1028.59674993586 73.585 2 -2.3159407683751825 0.45588580952584457 1.0 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 37628 26514 HAAFLVPL True PC9_epitope_Rep5 866.5014237406599 866.50032993586 107.97 2 -2.3162032736229787 0.45589162277374756 1.0 ['nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3'] 126228 21197 VPGVAFGD True PC9_epitope_Rep1 760.3755545212 760.37444993586 86.366 2 -2.3166289130582034 0.455904191104986 1.0 ['nc|ENSG00000106443|O94880-2|PHF14', 'ENST00000490957.5_1_7:11013950-11101713:+|nuORF', 'nc|ENSG00000106443|O94880-1|PHF14', 'ENSG00000106443|ENST00000634607|PHF14'] 16912 23168 EGDEDPCP True H1975_Epitope_Rep1 860.28581311028 860.28470993586 96.317 2 -2.3166827567029653 0.455904191104986 1.0 ['ENSG00000188818|ENST00000283441|ZDHHC11'] 33037 22874 GKAGRQHW True H1975_Epitope_Rep3 938.48348226074 938.4823899358599 95.557 2 -2.3167408082683396 0.455904191104986 1.0 ['ENSG00000127311|ENST00000247815|HELB'] 95746 17728 SCGSKSWV True NCI_RA007_Epitope_Rep5 852.37998827864 852.37888993586 74.971 2 -2.3168068643626247 0.455904191104986 1.0 ['ENST00000533387.5_1_11:134130766-134134851:+|nuORF'] 52185 26251 KMEWKVKIR True NCI_RA007_Epitope_Rep5 1216.71143359024 1216.71032993586 108.57 2 -2.3169982698201848 0.4559206871501218 1.0 ['CCDC91-PDZRN4|1|fusion', 'ENST00000548316.1_1_12:41903559-41967689:+|nuORF', 'nc|ENSG00000165966|Q6ZMN7-4|PDZRN4', 'nc|ENSG00000165966|Q6ZMN7-2|PDZRN4', 'PDZRN4|p.D1005Tfs*4|1|0.32|ENSG00000165966|chr12:41573791-41573791|G/-|frameshift_variant', 'ENSG00000165966|ENST00000402685|PDZRN4'] 10152 133 CCCCCCSH True PC9_epitope_Rep1 860.1566136546801 860.15550993586 0.72865 2 -2.3171508744560843 0.45592162895540883 1.0 ['nc|ENSG00000231721|A0A455ZAR2|LINC-PINT', 'ENST00000451786.5_1_7:130792823-130793084:-|nuORF'] 124199 25705 VLAHAYAP True PC9_epitope_Rep5 840.4493881678 840.44828993586 104.24 2 -2.31724243296537 0.45592162895540883 1.0 ['ENSG00000149968|ENST00000299855|MMP3'] 10542 24406 CPPPCSSV True PC9_epitope_Rep4 788.3196965212001 788.31858993586 102.36 2 -2.317507961037315 0.45596043115512397 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 82275 6935 PTMTFISLFF True PC9_epitope_Rep1 1202.6045684798598 1202.6034699358602 31.482 2 -2.317580257281619 0.45596043115512397 1.0 ['ENST00000227155.8_1_11:44641386-44641557:+|nuORF'] 49292 22457 KHLQKQEGA True PC9_epitope_Rep6 1037.5617921510898 1037.5606899358602 99.376 2 -2.317616996808043 0.45596043115512397 1.0 ['nc|ENSG00000091656|Q86UP3|ZFHX4', 'nc|ENSG00000091656|Q86UP3-4|ZFHX4', 'nc|ENSG00000091656|Q86UP3-2|ZFHX4', 'ENSG00000091656|ENST00000651372|ZFHX4', 'ZFHX4|p.Q2344Kfs*48|2|0.43|ENSG00000091656|chr8:76853949-76853949|C/-|frameshift_variant', 'ZFHX4|p.P2910Qfs*27|1|0.24|ENSG00000091656|chr8:76855647-76855647|C/-|frameshift_variant', 'ZFHX4|p.A2982Qfs*10|1|0.33|ENSG00000091656|chr8:76855863-76855863|G/-|frameshift_variant', 'ZFHX4|p.N1257Kfs*31|1|0.25|ENSG00000091656|chr8:76849634-76849635|-/A|frameshift_variant', 'ZFHX4|p.K1442Nfs*10|1|0.42|ENSG00000091656|chr8:76851241-76851241|A/-|frameshift_variant'] 61634 3294 LLHFHMTFMLF True PC9_epitope_Rep2 1435.71447036535 1435.71283490379 17.925 3 -2.318121080007629 0.4559982907808995 1.0 ['ENST00000368608.3_1_6:116599413-116599590:-|nuORF'] 29833 24042 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 99.002 2 -2.318432649292744 0.4560147845872814 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 97756 13304 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 57.853 2 -2.3188057033117193 0.4560205956501303 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 15142 14181 EAEPHLSG True NCI_RA007_Epitope_Rep1 838.38209645362 838.38154496793 59.195 1 -2.319628139095485 0.45604477771368757 1.0 ['ENSG00000198597|ENST00000355537|ZNF536', 'ZNF536|p.P24T|1|0.15|ENSG00000198597|chr19:30443632-30443632|C/A|missense_variant', 'ZNF536|p.L396Pfs*145|1|0.34|ENSG00000198597|chr19:30444746-30444747|-/T|frameshift_variant'] 48995 19068 KFGASRAA True H1975_Epitope_Rep2 806.43988611326 806.43878993586 79.155 2 -2.3197749286565297 0.45604477771368757 1.0 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581108.5_1_17:80207265-80210400:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 137528 24550 YLQPWAII True NCI_RA007_Epitope_Rep1 1002.5538532363399 1002.55274993586 101.7 2 -2.319887107707254 0.45604477771368757 1.0 ['ENSG00000261272|ENST00000561890|MUC22'] 63584 25177 LPLLLLWTRG True PC9_epitope_Rep2 1180.73321458064 1180.73210993586 102.51 2 -2.319988652311462 0.45604477771368757 1.0 ['nc|ENSG00000074660|Q14162-2|SCARF1', 'ENSG00000074660|ENST00000263071|SCARF1', 'ENST00000573867.1_1_17:1546734-1549000:-|nuORF', 'nc|ENSG00000074660|Q14162-4|SCARF1', 'ENST00000576012.5_1_17:1543740-1549000:-|nuORF', 'nc|ENSG00000074660|Q14162-5|SCARF1', 'nc|ENSG00000074660|Q14162-3|SCARF1', 'SCARF1|p.A623Dfs*6|1|0.63|ENSG00000074660|chr17:1635383-1635384|-/T|frameshift_variant'] 74015 22883 NHRPGALP True PC9_epitope_Rep3 860.461684187 860.46058993586 93.285 2 -2.3201395444461332 0.45604477771368757 1.0 ['ENSG00000184058|ENST00000649276|TBX1', 'nc|ENSG00000184058|O43435-3|TBX1', 'nc|ENSG00000184058|O43435-2|TBX1', 'nc|ENSG00000184058|O43435|TBX1'] 117894 27250 VAQAFLKL True PC9_epitope_Rep1 888.5432885526399 888.54274496793 111.36 1 -2.3202660715986716 0.45604477771368757 1.0 ['nc|ENSG00000197251|Q6ZUF6|LINC00336'] 98721 24629 SIRQICFC True H1975_Epitope_Rep2 968.45719305352 968.45608993586 101.29 2 -2.3204376707021477 0.45605058802166226 1.0 ['ENST00000441876.6_1_22:45728453-45732244:+|nuORF'] 29757 24778 FVRLLLEQ True NCI_RA007_Epitope_Rep1 1016.6018660579198 1016.60076993586 102.58 2 -2.3214686112948697 0.456104933722135 1.0 ['ENSG00000230778|ENST00000434396|ANKRD63'] 48348 24103 KDYNHLPT True H1975_Epitope_Rep1 986.4821448480599 986.48104993586 99.99 2 -2.3214762073821937 0.456104933722135 1.0 ['ENST00000556962.1_1_14:50789283-50790835:+|nuORF', 'ENST00000555939.5_1_14:50779073-50791268:+|nuORF', 'ENSG00000125375|ENST00000557421|DMAC2L', 'ENST00000554438.5_1_14:50779073-50792438:+|nuORF', 'DMAC2L|p.W70L|1|0.36|ENSG00000125375|chr14:50322612-50322612|G/T|missense_variant', 'nc|ENSG00000125375|Q99766-3|DMAC2L', 'nc|ENSG00000125375|Q99766-2|DMAC2L', 'ENST00000557421.5_1_14:50779073-50792346:+|nuORF'] 8407 5274 ATQLLDPYM True PC9_epitope_Rep2 1050.50558271458 1050.5044899358602 25.675 2 -2.3215967329112557 0.4561107432013843 1.0 ['ENST00000571846.5_2_17:7761168-7761255:+|nuORF'] 91017 18534 RLKMFLTLH True NCI_RA007_Epitope_Rep5 1157.6743198055299 1157.67322993586 78.117 2 -2.3219786087440264 0.4561223617875758 1.0 ['ENST00000436258.1_1_7:35131492-35145694:-|nuORF'] 45003 20094 IQLKRNKTEKV True NCI_RA007_Epitope_Rep5 1355.82488311935 1355.82378993586 84.234 2 -2.3221875599461006 0.4561223617875758 1.0 ['nc|ENSG00000088756|Q9P2N2-3|ARHGAP28', 'nc|ENSG00000088756|Q9P2N2-5|ARHGAP28', 'nc|ENSG00000088756|Q9P2N2-2|ARHGAP28', 'ENSG00000088756|ENST00000383472|ARHGAP28'] 52376 25481 KPGFIKVVR True PC9_epitope_Rep1 1042.66513502082 1042.66402993586 103.0 2 -2.322250971942327 0.456128170894526 1.0 ['ENSG00000110328|ENST00000227756|GALNT18'] 44420 22334 INGRPSANDP True PC9_epitope_Rep2 1039.5046711977898 1039.50356993586 91.392 2 -2.3225169841895537 0.45613397987738447 1.0 ['LAMA2|p.D226N|3|0.22|ENSG00000196569|chr6:129143937-129143937|G/A|missense_variant'] 120863 9411 VGDRSEWG True NCI_RA007_Epitope_Rep3 904.4038945273599 904.40278993586 44.104 2 -2.3234356694205096 0.4561397887361552 1.0 ['ENST00000531101.5_1_11:4621508-4624512:-|nuORF', 'ENSG00000167333|ENST00000300747|TRIM68', 'nc|ENSG00000167333|Q6AZZ1-2|TRIM68'] 35360 22655 GTAGVKVR True H1975_Epitope_Rep1 786.47118624154 786.47008993586 94.224 2 -2.323878090796858 0.4561416624835792 1.0 ['ENST00000357776.6_2_17:42977098-42978910:+|nuORF'] 87935 3553 QVPRGESVQ True PC9_epitope_Rep4 998.5145076054998 998.51340993586 19.761 2 -2.323920517269691 0.4561416624835792 1.0 ['ENST00000492808.5_1_1:26644456-26645257:+|nuORF'] 112804 5671 TPLSAAAHTH True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 27.203 2 -2.3239220222142283 0.4561416624835792 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 109274 23562 TGCGRGAK True NCI_RA007_Epitope_Rep5 748.3650069208398 748.3644549679301 97.944 1 -2.3240912516071477 0.4561416624835792 1.0 ['ENSG00000137936|ENST00000260502|BCAR3', 'nc|ENSG00000137936|O75815-3|BCAR3', 'nc|ENSG00000137936|O75815-2|BCAR3'] 119040 13148 VEGLKKEL True NCI_RA007_Epitope_Rep2 914.54368247546 914.54258993586 55.775 2 -2.3243309191185473 0.4561425992972563 1.0 ['ENST00000393448.6_1_5:179018652-179028988:+|nuORF', 'nc|ENSG00000176783|Q96T51-2|RUFY1', 'ENSG00000176783|ENST00000319449|RUFY1', 'ENST00000502531.1_1_5:179023563-179032937:+|nuORF'] 112809 4735 TPLSAAAHTH True PC9_epitope_Rep6 1004.5039429218 1004.50284993586 25.628 2 -2.3244328926738675 0.4561425992972563 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 74504 9613 NKRGQEIWI True PC9_epitope_Rep5 1142.61964138038 1142.61854993586 41.94 2 -2.32535278364385 0.4562375856987249 1.0 ['L1ME1_dup14741|chr8:25510836-25512219:-|1.1935286187833651|0.2188578600898351|2.45|501.0|53|3|sense'] 58971 11010 LGAAEKKV True PC9_epitope_Rep3 814.4912529797799 814.49014993586 47.341 2 -2.32545896303265 0.4562375856987249 1.0 ['nc|ENSG00000145901|Q15025-7|TNIP1', 'nc|ENSG00000145901|Q15025-8|TNIP1', 'nc|ENSG00000145901|Q15025-5|TNIP1', 'nc|ENSG00000145901|Q15025-6|TNIP1', 'nc|ENSG00000145901|Q15025-4|TNIP1', 'nc|ENSG00000145901|Q15025-3|TNIP1', 'nc|ENSG00000145901|Q15025-2|TNIP1', 'ENSG00000145901|ENST00000521591|TNIP1'] 15663 13152 ECEHAYPG True NCI_RA007_Epitope_Rep5 904.3385173894799 904.33742993586 57.266 2 -2.325910258012449 0.4562375856987249 1.0 ['nc|ENSG00000167755|Q92876-2|KLK6', 'ENSG00000167755|ENST00000310157|KLK6'] 103040 19301 SQKSSVKELLK True NCI_RA007_Epitope_Rep5 1245.7292513990099 1245.72814993586 81.115 2 -2.326003502246322 0.4562375856987249 1.0 ['ENSG00000240563|ENST00000498273|L1TD1'] 3631 10570 AGPVGPMP True H1975_Epitope_Rep3 724.35779628208 724.35724496793 45.726 1 -2.3264892255580847 0.4562375856987249 1.0 ['ENST00000600410.5_1_19:48257983-48259211:+|nuORF'] 81115 17950 PPHIFAMA True NCI_RA007_Epitope_Rep4 882.44219461238 882.44108993586 77.662 2 -2.32654559916504 0.4562375856987249 1.0 ['ENSG00000095777|ENST00000642920|MYO3A', 'MYO3A|p.R1013Pfs*5|1|0.15|ENSG00000095777|chr10:26166100-26166101|-/C|frameshift_variant'] 95752 22244 SCKSEFLKK True NCI_RA007_Epitope_Rep5 1068.56376629704 1068.5626699358602 92.708 2 -2.326685113279828 0.4562375856987249 1.0 ['ENSG00000101230|ENST00000262487|ISM1'] 60139 23485 LHVWPILMKK True H1975_Epitope_Rep3 1263.75257012623 1263.75146993586 98.002 2 -2.326706719769692 0.4562375856987249 1.0 ['ENST00000231572.7_1_5:167943936-167944917:+|nuORF'] 37792 25107 HCIHENQT True PC9_epitope_Rep1 980.41341366524 980.41230993586 101.46 2 -2.3267476690731668 0.4562375856987249 1.0 ['SLC44A5|p.H538Tfs*18|1|0.16|ENSG00000137968|chr1:75217878-75217878|G/-|frameshift_variant', 'nc|ENSG00000137968|Q8NCS7-5|SLC44A5', 'ENSG00000137968|ENST00000370859|SLC44A5', 'nc|ENSG00000137968|Q8NCS7|SLC44A5'] 72579 23570 MVPLLMRK True H1975_Epitope_Rep3 986.57691426338 986.57580993586 98.337 2 -2.3269671949658677 0.45626475016819196 1.0 ['ENST00000265433.7_1_8:90993651-90993702:-|nuORF'] 112805 2622 TPLSAAAHTH True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 14.738 2 -2.3272023066772154 0.4562656842330076 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 68982 18548 LVGKVIGK True PC9_epitope_Rep1 812.5483739330799 812.54726993586 76.135 2 -2.327271096482272 0.4562656842330076 1.0 ['ENSG00000114416|ENST00000357559|FXR1', 'USP13-FXR1|3|fusion', 'USP13-FXR1|1|fusion', 'nc|ENSG00000114416|P51114-2|FXR1', 'USP13-FXR1|4|fusion', 'USP13-FXR1|2|fusion', 'nc|ENSG00000114416|P51114-3|FXR1', 'TP53-FXR2|1|fusion', 'ENSG00000129245|ENST00000250113|FXR2', 'TP53-FXR2|2|fusion', 'nc|ENSG00000102081|Q06787-8|FMR1', 'nc|ENSG00000102081|Q06787-6|FMR1', 'nc|ENSG00000102081|Q06787-2|FMR1', 'nc|ENSG00000102081|Q06787-4|FMR1', 'nc|ENSG00000102081|Q06787-5|FMR1', 'nc|ENSG00000102081|Q06787-9|FMR1', 'nc|ENSG00000102081|Q06787-7|FMR1', 'nc|ENSG00000102081|Q06787-3|FMR1', 'ENSG00000102081|ENST00000370475|FMR1', 'nc|ENSG00000102081|Q06787-11|FMR1', 'nc|ENSG00000102081|Q06787-10|FMR1'] 97759 15120 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 64.825 2 -2.327568123105974 0.456282169019499 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 34003 16494 GNINAVHLK True NCI_RA007_Epitope_Rep3 964.54541381096 964.54430993586 72.675 2 -2.328058007478023 0.45632001025126273 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 81641 19041 PRRVIERPP True H1975_Epitope_Rep1 1118.6672602791398 1118.6661699358601 79.374 2 -2.3283427648998183 0.4563258158209465 1.0 ['nc|ENSG00000198000|Q76FK4-2|NOL8', 'nc|ENSG00000198000|Q76FK4-4|NOL8', 'ENSG00000198000|ENST00000442668|NOL8'] 134993 25079 YAGFHVAL True PC9_epitope_Rep5 876.4493881678 876.44828993586 101.61 2 -2.3290586121435783 0.4563374265883609 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 117863 10051 VAPGVAGA True NCI_RA007_Epitope_Rep5 640.3544251538 640.3538749679301 45.301 1 -2.3291016571449865 0.4563374265883609 1.0 ['ENST00000370873.8_1_20:60718414-60718447:-|nuORF'] 88500 21223 RAAKTVAH True PC9_epitope_Rep3 852.49298431528 852.49188993586 86.923 2 -2.329272206997065 0.4563441640951171 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 40230 23956 HRHLVELLA True NCI_RA007_Epitope_Rep3 1086.62981214126 1086.6287099358601 103.79 2 -2.329487636747373 0.4563441640951171 1.0 ['TUT1|p.R47L|1|0.36|ENSG00000149016|chr11:62589164-62589164|C/A|missense_variant'] 26146 22154 FHMASFFS True H1975_Epitope_Rep2 972.4163737873599 972.41526993586 91.563 2 -2.3297016867685536 0.4563441640951171 1.0 ['nc|ENSG00000143921|Q9H221-2|ABCG8', 'ENSG00000143921|ENST00000272286|ABCG8'] 37623 25788 HAAAPGGG True H1975_Epitope_Rep2 636.2979729068401 636.29742496793 105.89 1 -2.3297989073002983 0.45634509636431586 1.0 ['ENST00000345057.8_1_16:67188417-67189138:-|nuORF'] 69906 6836 LYDFLNELF True H1975_Epitope_Rep1 1172.57537652656 1172.57426993586 31.339 2 -2.3301312567469292 0.45634509636431586 1.0 ['ENST00000489169.1_1_10:120445642-120450964:-|nuORF'] 99753 16009 SLGLAVARDE True PC9_epitope_Rep2 1029.5454733806098 1029.54436993586 66.834 2 -2.330363096746608 0.45634602859369827 1.0 ['ENST00000586790.5_1_19:56159538-56160159:+|nuORF'] 71510 21613 MKPAIAPK True PC9_epitope_Rep4 854.5047948689399 854.50368993586 91.324 2 -2.330472037689203 0.45634602859369827 1.0 ['nc|ENSG00000180263|Q6ZV73-2|FGD6', 'ENSG00000180263|ENST00000343958|FGD6'] 26106 14043 FHFIMGLAVFH True NCI_RA007_Epitope_Rep1 1317.6692344250898 1317.6681299358602 58.651 2 -2.3307541289650633 0.456346960783267 1.0 ['SMURF1|p.S466_D468del|1|0.13|ENSG00000198742|chr7:99042164-99042172|TCCGTAGAA/-|inframe_deletion'] 21318 4720 ERKQRELQEQE True H1975_Epitope_Rep1 1471.73791858975 1471.73626490379 23.208 3 -2.330878583460949 0.456346960783267 1.0 ['ITSN2|p.G507Afs*55|1|0.21|ENSG00000198399|chr2:24295779-24295779|C/-|frameshift_variant', 'nc|ENSG00000198399|Q9NZM3-4|ITSN2', 'nc|ENSG00000198399|Q9NZM3-3|ITSN2', 'nc|ENSG00000198399|Q9NZM3-2|ITSN2', 'ENSG00000198399|ENST00000355123|ITSN2'] 82704 24889 PVPHSVLL True H1975_Epitope_Rep2 860.51198842436 860.51088993586 102.31 2 -2.331032254083393 0.4563478929330244 1.0 ['ENST00000482143.5_1_1:46649328-46650297:+|nuORF', 'ENST00000482928.5_1_1:46646779-46650297:+|nuORF'] 52378 25506 KPGFLRKNQ True PC9_epitope_Rep1 1086.62981214126 1086.6287099358601 103.1 2 -2.331182424033455 0.4563478929330244 1.0 ['ENSG00000091009|ENST00000265271|RBM27'] 44585 21899 IPGAAENP True NCI_RA007_Epitope_Rep1 767.38136817763 767.3808149679301 89.669 1 -2.331811070469749 0.4563514090520922 1.0 ['GLDN|p.G187E|1|0.19|ENSG00000186417|chr15:51394853-51394853|G/A|missense_variant'] 82944 1211 PWNWLDFTVI True H1975_Epitope_Rep2 1289.6444591458899 1289.64280490379 6.5545 3 -2.3321452383886676 0.4563514090520922 1.0 ['nc|ENSG00000144285|P35498-3|SCN1A', 'nc|ENSG00000144285|P35498-2|SCN1A', 'ENSG00000144285|ENST00000674923|SCN1A', 'SCN2A|p.L279Ffs*7|1|0.42|ENSG00000136531|chr2:165310458-165310459|-/T|frameshift_variant', 'SCN2A|p.V424Wfs*30|1|0.11|ENSG00000136531|chr2:165313994-165313994|G/-|frameshift_variant', 'nc|ENSG00000136531|Q99250-2|SCN2A', 'ENSG00000136531|ENST00000375437|SCN2A', 'ENST00000480032.4_1_2:166152333-166226884:+|nuORF', 'SCN2A|p.H645Qfs*36|1|0.12|ENSG00000136531|chr2:165323419-165323419|T/-|frameshift_variant', 'SCN1A|p.D188Y|1|0.41|ENSG00000144285|chr2:166054678-166054678|C/A|missense_variant'] 106032 21547 SVLPGRRH True NCI_RA007_Epitope_Rep5 920.5304324531601 920.52932993586 89.966 2 -2.3324233062253614 0.4563514090520922 1.0 ['ENSG00000135482|ENST00000257940|ZC3H10'] 83351 20651 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 86.389 2 -2.3326008170032635 0.4563514090520922 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 127280 26378 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 107.34 2 -2.3326829067093717 0.4563514090520922 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 51944 20733 KKVGVSSS True H1975_Epitope_Rep3 790.4548674710601 790.45376993586 86.634 2 -2.3328938990319323 0.4563514090520922 1.0 ['nc|ENSG00000170921|Q9HCD6|TANC2', 'nc|ENSG00000170921|Q9HCD6-2|TANC2', 'ENSG00000170921|ENST00000689528|TANC2', 'nc|ENSG00000170921|Q9HCD6-3|TANC2', 'nc|ENSG00000170921|Q9HCD6-4|TANC2', 'ENST00000583545.1_1_17:61432467-61466989:+|nuORF'] 3703 14710 AGSEHPDPEQ True PC9_epitope_Rep3 1065.4363168544498 1065.43520993586 61.722 2 -2.3330940580895208 0.4563514090520922 1.0 ['ENST00000252032.9_1_20:3362138-3388256:-|nuORF'] 112454 21857 TNQDLIRLVA True PC9_epitope_Rep6 1141.64552177505 1141.6444299358602 96.973 2 -2.3331440943508146 0.4563514090520922 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1'] 114570 22118 TSKPKDVD True PC9_epitope_Rep6 888.4552613938798 888.45416993586 98.019 2 -2.3333092997423135 0.4563514090520922 1.0 ['CLIP4|p.A344Hfs*6|1|0.23|ENSG00000115295|chr2:29152693-29152693|G/-|frameshift_variant', 'nc|ENSG00000115295|Q8N3C7-3|CLIP4', 'nc|ENSG00000115295|Q8N3C7-2|CLIP4', 'ENSG00000115295|ENST00000320081|CLIP4', 'nc|ENSG00000115295|Q8N3C7-4|CLIP4'] 29097 24653 FTQRKITR True PC9_epitope_Rep4 1048.6141620771198 1048.61306993586 103.32 2 -2.33334944613363 0.4563514090520922 1.0 ['ENSG00000125498|ENST00000336077|KIR2DL1', 'nc|ENSG00000125498|P43626-2|KIR2DL1', 'nc|ENSG00000243772|P43628-2|KIR2DL3', 'ENST00000415311.1_1_19:55270285-55278820:+|nuORF', 'ENSG00000243772|ENST00000342376|KIR2DL3', 'KIR3DL3|p.V388L|1|0.46|ENSG00000242019|chr19:54736025-54736025|G/C|missense_variant', 'nc|ENSG00000167633|P43629-2|KIR3DL1', 'ENSG00000167633|ENST00000391728|KIR3DL1', 'nc|ENSG00000242019|Q8N743|KIR3DL3', 'ENSG00000242019|ENST00000291860|KIR3DL3'] 80137 25051 PKKRNHHQNV True PC9_epitope_Rep2 1256.6850356016 1256.68392993586 102.03 2 -2.333418736286118 0.4563514090520922 1.0 ['ENST00000342992.10_3_2:179563626-179566308:-|nuORF'] 125817 20160 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 84.492 2 -2.3335021808470526 0.4563514090520922 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 4997 11412 ALLAPRVGGT True PC9_epitope_Rep5 953.56581490237 953.56470993586 48.896 2 -2.3337763346361564 0.4563514090520922 1.0 ['ENSG00000204970|ENST00000504120|PCDHA1', 'nc|ENSG00000204970|Q9Y5I3-3|PCDHA1', 'ENSG00000081842|ENST00000529310|PCDHA6', 'nc|ENSG00000081842|Q9UN73-3|PCDHA6', 'ENSG00000204963|ENST00000525929|PCDHA7', 'PCDHA7|p.S632Afs*6|1|0.5|ENSG00000204963|chr5:140836276-140836276|C/-|frameshift_variant', 'nc|ENSG00000204963|Q9UN72-2|PCDHA7'] 101026 9928 SLTHTPLAAL True PC9_epitope_Rep4 1022.5760452328999 1022.57494993586 45.839 2 -2.334116327881453 0.4563514090520922 1.0 ['LTR2752_dup21|chr2:81481148-81482372:-|1.992639235350852|0.0780133736102343|4.67|458.0|31|3|sense'] 124002 16735 VKKTTEAT True NCI_RA007_Epitope_Rep5 876.4916469026 876.49054993586 71.134 2 -2.334293041351563 0.4563514090520922 1.0 ['ENST00000537556.1_1_12:64238596-64474299:+|nuORF', 'SRGAP1|p.Y944*|1|0.22|ENSG00000196935|chr12:64128147-64128160|CAATACACGGGCTT/-|frameshift_variant', 'nc|ENSG00000196935|Q7Z6B7-2|SRGAP1', 'ENSG00000196935|ENST00000355086|SRGAP1'] 36590 23469 GVLHILPIFLF True PC9_epitope_Rep1 1267.7692657361897 1267.7686749679299 95.059 1 -2.334394184234581 0.4563514090520922 1.0 ['ENST00000467438.1_1_1:87597663-87598596:+|nuORF'] 127281 26552 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 108.16 2 -2.3345502014555075 0.4563514090520922 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 46896 19062 IVIIRLATF True PC9_epitope_Rep5 1044.66955169492 1044.66844993586 78.351 2 -2.334602468817078 0.4563514090520922 1.0 ['ENST00000307729.11_1_10:21884331-21901337:+|nuORF'] 52536 24850 KPQLLIFSRRK True NCI_RA007_Epitope_Rep1 1384.86668836168 1384.86558993586 102.86 2 -2.3346600689854755 0.4563514090520922 1.0 ['nc|ENSG00000091592|Q9C000-5|NLRP1', 'nc|ENSG00000091592|Q9C000-2|NLRP1', 'ENSG00000091592|ENST00000572272|NLRP1', 'ENST00000571307.1_1_17:5433304-5487319:-|nuORF'] 104050 26855 SRTLRTKKLF True PC9_epitope_Rep2 1248.76663996724 1248.76554993586 110.37 2 -2.335078551698255 0.4563532727039836 1.0 ['nc|ENSG00000066248|Q8N5V2-3|NGEF', 'NGEF|p.Q616Rfs*16|1|0.27|ENSG00000066248|chr2:232881242-232881242|G/-|frameshift_variant', 'ENSG00000066248|ENST00000264051|NGEF'] 71496 25277 MKLWKKRW True PC9_epitope_Rep2 1174.6797395391397 1174.6786499358602 102.9 2 -2.335195309397631 0.4563532727039836 1.0 ['ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5', 'PLEKHA5-AEBP2|4|fusion', 'PLEKHA5-AEBP2|2|fusion', 'PLEKHA5-AEBP2|3|fusion', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'PLEKHA5-AEBP2|10|fusion', 'PLEKHA5-AEBP2|8|fusion', 'PLEKHA5-AEBP2|9|fusion', 'PLEKHA5-AEBP2|7|fusion', 'PLEKHA5-AEBP2|6|fusion', 'PLEKHA5-AEBP2|5|fusion', 'PLEKHA5-AEBP2|12|fusion', 'PLEKHA5-AEBP2|11|fusion', 'PLEKHA5-AEBP2|1|fusion'] 11466 5061 DFYYREEFIYW True NCI_RA007_Epitope_Rep1 1629.7139952576897 1629.7123349037902 23.771 3 -2.3352084523718037 0.4563532727039836 1.0 ['LRP1B|p.D3051Y|1|0.26|ENSG00000168702|chr2:140487709-140487709|C/A|missense_variant'] 49560 19140 KKKARRRHTD True NCI_RA007_Epitope_Rep3 1294.7694339318998 1294.76832993586 83.591 2 -2.3353098210425283 0.4563532727039836 1.0 ['ENST00000489097.5_1_1:6535105-6537631:-|nuORF', 'nc|ENSG00000171680|O94827-4|PLEKHG5', 'ENSG00000171680|ENST00000377728|PLEKHG5', 'UBE4B-PLEKHG5|1|fusion', 'nc|ENSG00000171680|O94827-3|PLEKHG5', 'nc|ENSG00000171680|O94827-7|PLEKHG5'] 134156 23463 WRIILGNEH True NCI_RA007_Epitope_Rep3 1136.60907669668 1136.6079699358602 101.83 2 -2.335545406128237 0.45636093885087897 1.0 ['nc|ENSG00000179988|Q8IV42|PSTK'] 137401 25067 YLLMIFKLVQ True PC9_epitope_Rep5 1266.74100238302 1266.7399099358602 101.56 2 -2.3355704115519558 0.45636093885087897 1.0 ['HRNR|p.A1094*|3|0.13|ENSG00000197915|chr1:152218348-152218349|GC/-|frameshift_variant', 'ENSG00000197915|ENST00000368801|HRNR', 'CON__Q86YZ3'] 83189 24800 PYVPTISH True PC9_epitope_Rep3 912.4705175352001 912.46942993586 100.77 2 -2.3356207324223757 0.45636093885087897 1.0 ['ENSG00000150457|ENST00000382592|LATS2'] 103039 19118 SQKSSVKELLK True NCI_RA007_Epitope_Rep5 1245.7292513990099 1245.72814993586 80.408 2 -2.335706775001157 0.45636093885087897 1.0 ['ENSG00000240563|ENST00000498273|L1TD1'] 40493 18556 HSETFYECP True NCI_RA007_Epitope_Rep5 1111.42806066987 1111.4269699358601 78.199 2 -2.3361177909214796 0.45636093885087897 1.0 ['ENSG00000254656|ENST00000649591|RTL1'] 19048 17085 ELGPDPLLAR True PC9_epitope_Rep1 1079.5975089534697 1079.59640993586 70.543 2 -2.3375167030284003 0.4563936735608632 1.0 ['nc|ENSG00000077238|P24394-3|IL4R', 'ENSG00000077238|ENST00000395762|IL4R'] 123988 20925 VKKMLVEA True PC9_epitope_Rep6 916.5415743004799 916.54046993586 93.262 2 -2.337766420535094 0.4563936735608632 1.0 ['ENSG00000166848|ENST00000300086|TERF2IP'] 101358 24751 SMFAHAPL True PC9_epitope_Rep3 872.4214591678 872.42036993586 100.58 2 -2.3384072929473083 0.4563936735608632 1.0 ['nc|ENSG00000113360|Q9NRR4-4|DROSHA', 'ENSG00000113360|ENST00000344624|DROSHA', 'nc|ENSG00000113360|Q9NRR4-3|DROSHA', 'nc|ENSG00000113360|Q9NRR4-2|DROSHA', 'DROSHA|p.G921Vfs*23|2|0.17|ENSG00000113360|chr5:31449340-31449341|-/A|frameshift_variant'] 91202 16691 RLRELCRRWLR True NCI_RA007_Epitope_Rep2 1555.8994025556299 1555.8983099358602 69.657 2 -2.3386653109409656 0.4563936735608632 1.0 ['ENSG00000160908|ENST00000337673|ZNF394', 'ENST00000481881.1_1_7:99096270-99097704:-|nuORF', 'nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2', 'nc|ENSG00000176371|Q7Z7L9-3|ZSCAN2', 'nc|ENSG00000160908|Q53GI3-3|ZNF394', 'ENSG00000176371|ENST00000546148|ZSCAN2', 'ENSG00000186448|ENST00000344387|ZNF197', 'nc|ENSG00000186448|O14709-2|ZNF197'] 92793 22320 RRKSEEHL True NCI_RA007_Epitope_Rep5 1053.56794016069 1053.56684993586 93.006 2 -2.338834424718975 0.4563936735608632 1.0 ['nc|ENSG00000136295|Q9C0H2-2|TTYH3', 'ENSG00000136295|ENST00000258796|TTYH3', 'nc|ENSG00000136295|Q9C0H2-4|TTYH3'] 130042 7895 VTPSRSPW True PC9_epitope_Rep4 928.4766655448 928.47556993586 37.797 2 -2.338894262048847 0.4563936735608632 1.0 ['ENST00000289734.11_1_8:41513135-41518987:-|nuORF'] 133471 12384 WGQKKLIS True NCI_RA007_Epitope_Rep4 958.5600012459399 958.55890993586 54.631 2 -2.3389249215302024 0.4563936735608632 1.0 ['nc|ENSG00000133317|Q96DT0-4|LGALS12', 'nc|ENSG00000133317|Q96DT0-2|LGALS12', 'ENSG00000133317|ENST00000394618|LGALS12', 'nc|ENSG00000133317|Q96DT0-6|LGALS12', 'nc|ENSG00000133317|Q96DT0-3|LGALS12', 'nc|ENSG00000133317|Q96DT0|LGALS12', 'nc|ENSG00000133317|Q96DT0-7|LGALS12'] 114684 14850 TSSEDAPC True NCI_RA007_Epitope_Rep4 808.2908984907199 808.28980993586 64.583 2 -2.3392926105575933 0.4563936735608632 1.0 ['ENSG00000161996|ENST00000293879|WDR90', 'ENST00000546516.5_1_16:705169-713132:+|nuORF'] 60967 24723 LLAFAKNL True H1975_Epitope_Rep3 888.54328855264 888.54218993586 102.84 2 -2.339453847002284 0.4563936735608632 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 5885 22943 APGSARVEPHS True PC9_epitope_Rep4 1106.54687036294 1106.54627496793 96.47 1 -2.339479729129861 0.4563936735608632 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.G2269Afs*6|1|0.24|ENSG00000158683|chr7:47827398-47827398|C/-|frameshift_variant'] 123568 23180 VIILKYVP True NCI_RA007_Epitope_Rep3 943.6106398364699 943.6100949679301 100.68 1 -2.3395853872338304 0.4563936735608632 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|326|3|anti-sense'] 52358 15605 KPGDKIRST True NCI_RA007_Epitope_Rep4 1000.56654317836 1000.56544993586 67.785 2 -2.339726485037099 0.4563936735608632 1.0 ['ENST00000349215.7_1_11:18339453-18343686:-|nuORF', 'ENST00000396253.7_1_11:18333561-18343686:-|nuORF'] 51922 20044 KKSLKAIHLQF True NCI_RA007_Epitope_Rep5 1311.80269112279 1311.8015899358602 84.023 2 -2.339769451399142 0.4563936735608632 1.0 ['ENSG00000136999|ENST00000259526|CCN3'] 23063 19768 EVLCKNLA True NCI_RA007_Epitope_Rep1 888.4738886634799 888.47278993586 81.078 2 -2.3403751997757736 0.45640527618885 1.0 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 68761 20163 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 84.503 2 -2.3406584191453703 0.45640527618885 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 23150 12878 EVNKKKMEEKQ True PC9_epitope_Rep1 1389.7285997760098 1389.72694490379 54.408 3 -2.341859366239531 0.45647603700897477 1.0 ['ENSG00000146007|ENST00000274712|ZMAT2', 'ENST00000506644.3_1_5:140083564-140085338:+|nuORF'] 61622 19824 LLGTVEHQF True PC9_epitope_Rep6 1042.54474510462 1042.54364993586 88.913 2 -2.341990733130194 0.45647603700897477 1.0 ['ENSG00000076513|ENST00000261739|ANKRD13A', 'ANKRD13A|p.A557Hfs*21|1|0.16|ENSG00000076513|chr12:110037449-110037450|AG/-|frameshift_variant'] 80169 26593 PKVVLYKNL True PC9_epitope_Rep3 1072.6644663144798 1072.6633699358601 108.79 2 -2.342326033248717 0.45647603700897477 1.0 ['ENST00000441488.6_1_11:67925157-67938746:-|nuORF', 'ENSG00000110066|ENST00000304363|KMT5B'] 93021 23726 RRRFLELINL True NCI_RA007_Epitope_Rep3 1328.8040881051197 1328.80298993586 102.85 2 -2.3430428595765744 0.45652452298629786 1.0 ['ENST00000437750.2_1_11:20429511-20429577:+|nuORF'] 121371 21013 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 91.081 2 -2.343200334328235 0.4565303225944146 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 51 14455 AAAGMKVCQ True PC9_epitope_Rep2 877.41499388837 877.41388993586 60.871 2 -2.343338999909996 0.4565361220787536 1.0 ['nc|ENSG00000155792|Q8TB45-2|DEPTOR', 'ENSG00000155792|ENST00000286234|DEPTOR'] 90518 24086 RKDQSLRQLN True PC9_epitope_Rep2 1256.6949315789598 1256.69437496793 98.148 1 -2.3441423414500364 0.4565583916680895 1.0 ['nc|ENSG00000164989|Q6TFL3-3|CCDC171', 'ENSG00000164989|ENST00000380701|CCDC171', 'nc|ENSG00000164989|Q6TFL3-4|CCDC171', 'ENST00000470191.5_1_9:15845666-15971831:+|nuORF'] 109479 10913 TGVVPQLVK True PC9_epitope_Rep4 939.5753169569099 939.57420993586 49.746 2 -2.344219511207913 0.4565583916680895 1.0 ['ENSG00000182481|ENST00000330459|KPNA2'] 85676 21519 QLQRTSKK True PC9_epitope_Rep6 987.58252759567 987.58142993586 95.645 2 -2.344422789797826 0.4565748615453566 1.0 ['nc|ENSG00000204764|Q9H2T7-2|RANBP17'] 90811 22763 RKSKLGNRHR True PC9_epitope_Rep4 1250.7432191840599 1250.74212993586 95.775 2 -2.3446655969244232 0.4565757882942965 1.0 ['ENSG00000050030|ENST00000055682|NEXMIF'] 11690 23218 DHELGKYK True PC9_epitope_Rep6 988.4977949122 988.49668993586 102.41 2 -2.344763971462175 0.4565757882942965 1.0 ['ENSG00000161800|ENST00000312377|RACGAP1', 'RACGAP1|p.D413Mfs*10|1|0.34|ENSG00000161800|chr12:49994233-49994233|C/-|frameshift_variant'] 123251 17536 VHPFHLLV True NCI_RA007_Epitope_Rep3 960.5545219426799 960.55342993586 76.945 2 -2.344850564072495 0.4565815869221905 1.0 ['CON__Q3SZH5'] 81401 18198 PPVPVKKS True NCI_RA007_Epitope_Rep4 850.5276384885 850.52654993586 78.751 2 -2.3453578842287497 0.45658344003414425 1.0 ['SASH1|p.A989V|1|0.16|ENSG00000111961|chr6:148544436-148544436|C/T|missense_variant'] 104640 9414 SSWLSFTMP True PC9_epitope_Rep5 1054.47936796674 1054.47826993586 41.166 2 -2.345927254779312 0.45658344003414425 1.0 ['ENST00000306156.7_1_2:45879453-45879507:+|nuORF'] 74193 25795 NHYWYQMYI True H1975_Epitope_Rep2 1316.5648289262 1316.56372993586 105.91 2 -2.3460210249241795 0.45658344003414425 1.0 ['ENSG00000077147|ENST00000371142|TM9SF3', 'PIK3AP1-TM9SF3|1|fusion'] 60969 22849 LLAFAKNL True NCI_RA007_Epitope_Rep1 888.54328855264 888.54218993586 93.761 2 -2.3463453097937967 0.45658344003414425 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 60138 23463 LHVWPILMKK True H1975_Epitope_Rep3 1263.75257012623 1263.75146993586 97.92 2 -2.3465496491765254 0.4565999082382817 1.0 ['ENST00000231572.7_1_5:167943936-167944917:+|nuORF'] 88802 18702 RDRDMADTPC True H1975_Epitope_Rep2 1178.4808416020599 1178.4797499358601 77.635 2 -2.3471737446347065 0.4566057062375963 1.0 ['ENSG00000139718|ENST00000604567|SETD1B', 'nc|ENSG00000139718|Q9UPS6-2|SETD1B'] 116404 24227 TWIKTPEIMKV True PC9_epitope_Rep5 1344.7475443154399 1344.74644993586 98.196 2 -2.3473876503692437 0.45660663223934106 1.0 ['ENST00000538571.6_1_14:58909433-59003756:+|nuORF', 'nc|ENSG00000100578|Q9BVV6-2|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-4|KIAA0586', 'nc|ENSG00000100578|Q9BVV6|KIAA0586', 'ENSG00000100578|ENST00000652326|KIAA0586', 'nc|ENSG00000100578|Q9BVV6-3|KIAA0586'] 25904 25610 FGKVKVGK True PC9_epitope_Rep3 861.5436229058098 861.54252993586 104.0 2 -2.347393458925764 0.45660663223934106 1.0 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000511248.1_1_5:40777545-40798228:-|nuORF', 'ENST00000397006.2_1_5:40777312-40798264:-|nuORF'] 36268 23118 GVGKFIGMP True PC9_epitope_Rep2 904.4840594243599 904.4835149679301 94.414 1 -2.3477681122349803 0.4566075582015663 1.0 ['ENSG00000151576|ENST00000281273|QTRT2', 'nc|ENSG00000151576|Q9H974-4|QTRT2', 'ENST00000466870.1_1_3:113784185-113787033:+|nuORF'] 81455 23445 PQKTDHPS True H1975_Epitope_Rep3 908.4351946556399 908.43408993586 97.851 2 -2.347806357380097 0.4566075582015663 1.0 ['ENSG00000184371|ENST00000329608|CSF1'] 92305 10319 RQLLSSYQFYW True H1975_Epitope_Rep1 1489.73539940861 1489.7343099358602 44.639 2 -2.348828562626731 0.4566191532946398 1.0 ['ENSG00000254656|ENST00000649591|RTL1'] 16445 11267 EELNRRYH True H1975_Epitope_Rep3 1115.54720471611 1115.5461099358602 48.441 2 -2.3489044584882914 0.4566191532946398 1.0 ['ENSG00000123989|ENST00000243776|CHPF', 'nc|ENSG00000123989|Q8IZ52-4|CHPF'] 36591 23403 GVLHILPIFLF True PC9_epitope_Rep5 1267.7692657361897 1267.7686749679299 95.0 1 -2.3489766684129996 0.45662495065561354 1.0 ['ENST00000467438.1_1_1:87597663-87598596:+|nuORF'] 51908 20716 KKRRTRRLYP True NCI_RA007_Epitope_Rep2 1372.85276963304 1372.85113490379 85.668 3 -2.349144207381294 0.4566307478928838 1.0 ['L1PA3_dup10531|chr20:53455563-53461566:-|1.266666796754572|0.2916078731282124|2.12|491.0|40|2|sense'] 29830 23762 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 97.901 2 -2.350197163023394 0.45664234199632997 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 122464 9167 VGSNVFDM True PC9_epitope_Rep1 867.3796539254699 867.37854993586 40.11 2 -2.350239021301612 0.45664234199632997 1.0 ['nc|ENSG00000188467|Q71RS6-2|SLC24A5', 'ENSG00000188467|ENST00000341459|SLC24A5'] 111170 15410 TLEWATIR True PC9_epitope_Rep1 988.5341804209199 988.5336349679301 64.093 1 -2.3518210141474016 0.45667527257985363 1.0 ['ENSG00000138678|ENST00000264409|GPAT3', 'GPAT3|p.C306Lfs*11|1|0.11|ENSG00000138678|chr4:83597433-83597434|-/T|frameshift_variant'] 81508 24033 PQRIHHMA True NCI_RA007_Epitope_Rep5 988.5025034531601 988.50140993586 99.839 2 -2.3521214202307097 0.45667527257985363 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'AFF2|p.P472Nfs*24|2|0.14|ENSG00000155966|chrX:148953596-148953596|C/AA|frameshift_variant', 'nc|ENSG00000155966|P51816-7|AFF2'] 185 12890 AAERRRRRRWH True NCI_RA007_Epitope_Rep2 1548.872276291 1548.87064490379 54.76 3 -2.3522677244907366 0.4566810689710354 1.0 ['ENST00000321582.9_1_9:124855435-124855555:-|nuORF'] 123509 10949 VIHEDQWI True H1975_Epitope_Rep1 1038.51344497634 1038.51287496793 47.079 1 -2.352713424667507 0.4567082017581292 1.0 ['ENST00000323387.5_10:47380981-47400428:+|nuORF', 'nc|ENSG00000122376|Q86V20|SHLD2', 'ENSG00000122376|ENST00000298786|SHLD2'] 52375 23765 KPGFIKVVR True NCI_RA007_Epitope_Rep3 1042.66513502082 1042.66402993586 103.01 2 -2.3530505317523427 0.45672466582032706 1.0 ['ENSG00000110328|ENST00000227756|GALNT18'] 88732 24197 RDAEDDGEEED True H1975_Epitope_Rep2 1278.4483976597799 1278.4473099358602 99.608 2 -2.353297967858204 0.4567411295312467 1.0 ['nc|ENSG00000143401|Q9BTT0-3|ANP32E', 'ENSG00000143401|ENST00000583931|ANP32E', 'nc|ENSG00000143401|Q9BTT0-2|ANP32E'] 59926 21473 LHKPIYFFL True PC9_epitope_Rep4 1176.6695516949198 1176.66844993586 90.787 2 -2.353345560545904 0.4567469249725301 1.0 ['OR6Y1|p.M64I|1|0.09|ENSG00000197532|chr1:158547914-158547914|C/T|missense_variant'] 16913 24036 EGDEDPCP True H1975_Epitope_Rep1 860.28581311028 860.28470993586 99.737 2 -2.35372899206369 0.4567527202901643 1.0 ['ENSG00000188818|ENST00000283441|ZDHHC11'] 10220 24030 CEKKTYSVPA True H1975_Epitope_Rep1 1124.55359553616 1124.5524899358602 99.714 2 -2.3544531421064967 0.4567798508656831 1.0 ['ENSG00000004961|ENST00000380762|HCCS'] 36245 20180 GVGGGGHG True PC9_epitope_Rep5 596.26667277856 596.2661249679301 82.67 1 -2.3551018100631307 0.45679144042755193 1.0 ['ENST00000292363.9_1_19:651790-663233:-|nuORF'] 55599 21455 LCPLHVVP True PC9_epitope_Rep4 876.4891448047999 876.48859496793 90.717 1 -2.355181458092131 0.45679144042755193 1.0 ['ENST00000393640.8_1_16:70432511-70432613:-|nuORF'] 91354 7059 RMPTVLQCV True PC9_epitope_Rep4 1045.54125703065 1045.5401499358602 34.415 2 -2.355470546341566 0.45679815672135343 1.0 ['ENST00000599865.5_1_19:51410192-51411818:-|nuORF', 'ENST00000602148.1_1_19:51410192-51412503:-|nuORF', 'nc|ENSG00000167749|Q9Y5K2|KLK4', 'ENSG00000167749|ENST00000324041|KLK4'] 15500 7735 EAQPQLLDLRI True H1975_Epitope_Rep2 1294.7245003717399 1294.7234099358602 34.705 2 -2.3555494916032247 0.45679815672135343 1.0 ['nc|ENSG00000131831|Q9Y5P3-2|RAI2', 'ENSG00000131831|ENST00000451717|RAI2'] 8993 13698 AVHQKQSGL True PC9_epitope_Rep5 966.5246783663799 966.52358993586 57.716 2 -2.355603544743133 0.45679815672135343 1.0 ['ENST00000556905.2_1_15:22016140-22016464:-|nuORF'] 22904 3623 EVFEFYEEIL True PC9_epitope_Rep2 1316.6176352613597 1316.6165299358602 19.211 2 -2.3558716902649706 0.45682528507578907 1.0 ['ENSG00000064313|ENST00000378164|TAF2'] 4932 13455 ALHKHRTI True PC9_epitope_Rep2 974.5773826455801 974.57628993586 57.034 2 -2.356564092872964 0.45683107906302 1.0 ['ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3', 'ZFHX3|p.E3549D|1|0.35|ENSG00000140836|chr16:72787629-72787629|C/A|missense_variant'] 18003 8322 EIHRELRPQG True PC9_epitope_Rep2 1233.65781779425 1233.65672993586 37.377 2 -2.356923904493196 0.45683687292664454 1.0 ['ENSG00000142684|ENST00000374266|ZNF593'] 50 14308 AAAGGPWE True NCI_RA007_Epitope_Rep1 757.33950336565 757.33895496793 59.693 1 -2.357847989968329 0.4568591268359804 1.0 ['ENST00000578759.1_1_17:60217316-60217976:-|nuORF'] 104042 21715 SRSYLAVW True PC9_epitope_Rep4 980.5079656730799 980.50686993586 91.722 2 -2.357907824039448 0.4568591268359804 1.0 ['ENSG00000064547|ENST00000407877|LPAR2'] 93865 23373 RVFTTAIVV True H1975_Epitope_Rep2 1004.6018660579199 1004.60076993586 96.37 2 -2.3581927218066236 0.4568649202150354 1.0 ['ENST00000560334.5_1_15:79271198-79356973:-|nuORF', 'ENSG00000058335|ENST00000558480|RASGRF1', 'nc|ENSG00000058335|Q13972|RASGRF1'] 16987 18302 EGHSACFA True NCI_RA007_Epitope_Rep5 820.31738802208 820.31628993586 77.198 2 -2.359050424801814 0.456902712446535 1.0 ['CAMSAP3|p.S102Efs*32|1|0.19|ENSG00000076826|chr19:7605379-7605404|CCTCTGCACTGCTGGCCCTGCTGGCG/-|frameshift_variant'] 95415 23898 SAKKPCPV True PC9_epitope_Rep3 828.4527592960799 828.45166993586 97.21 2 -2.360156873884618 0.4569131009769208 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 81141 22057 PPIMLIGH True PC9_epitope_Rep5 876.4891448047999 876.48804993586 89.869 2 -2.361198940506431 0.4569131009769208 1.0 ['ENSG00000214517|ENST00000328257|PPME1', 'nc|ENSG00000214517|Q9Y570-4|PPME1'] 121392 23921 VGHSAGHP True PC9_epitope_Rep4 760.36163579256 760.36052993586 100.46 2 -2.361218316626773 0.4569131009769208 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 112542 21655 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 89.583 2 -2.3612817622118265 0.4569131009769208 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 86433 22748 QQQQRQIRLR True PC9_epitope_Rep2 1352.7749132351598 1352.77380993586 92.995 2 -2.3614087273073854 0.4569131009769208 1.0 ['ENST00000498134.1_1_13:33528197-33528527:-|nuORF'] 90720 16991 RKPGAGRT True H1975_Epitope_Rep2 841.48823328801 841.48712993586 70.605 2 -2.3614999215260886 0.4569131009769208 1.0 ['TULP1|p.R361Efs*10|2|0.22|ENSG00000112041|chr6:35505772-35505772|G/-|frameshift_variant', 'ENSG00000112041|ENST00000229771|TULP1'] 52863 24556 KRDKEKRTA True PC9_epitope_Rep4 1130.6520041378199 1130.65090993586 102.94 2 -2.3615867483599717 0.4569131009769208 1.0 ['ENSG00000166351|ENST00000299443|POTED'] 134473 9445 WTRMIWWFEPS True NCI_RA007_Epitope_Rep2 1537.71764116949 1537.71654993586 41.35 2 -2.361714010257391 0.4569131009769208 1.0 ['ENST00000526626.6_1_11:118898396-118900027:-|nuORF'] 93020 6993 RRREWKERYGH True NCI_RA007_Epitope_Rep4 1571.8181750294698 1571.8165349037902 33.523 3 -2.3619230783140077 0.4569131009769208 1.0 ['ENSG00000164187|ENST00000296603|LMBRD2', 'ENST00000505524.1_1_5:36108630-36114563:-|nuORF'] 127014 20770 VPYFIDLK True PC9_epitope_Rep6 993.5535188831699 993.55297496793 92.653 1 -2.362089156009508 0.4569131009769208 1.0 ['nc|ENSG00000100997|Q8N2K0-3|ABHD12', 'ENSG00000100997|ENST00000339157|ABHD12', 'nc|ENSG00000100997|Q8N2K0-2|ABHD12'] 127096 25534 VQAQIHLP True PC9_epitope_Rep2 904.5130510535198 904.51250496793 103.9 1 -2.3621137428601986 0.4569131009769208 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 10536 21980 CPPPCSSV True H1975_Epitope_Rep2 788.3196965212001 788.31858993586 90.873 2 -2.362538415459396 0.4569295579373967 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 134442 18549 WTHHLPDRS True PC9_epitope_Rep3 1147.55229009655 1147.55065490379 76.568 3 -2.3636014435201913 0.45697800908644925 1.0 ['ENST00000334536.12_1_16:28992906-28993772:+|nuORF'] 91984 5403 RPREALSTNEC True PC9_epitope_Rep5 1274.6037336160598 1274.60209490379 25.795 3 -2.3645999259444346 0.45700088504067987 1.0 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'AGPS|p.R117Gfs*22|1|0.11|ENSG00000018510|chr2:177420351-177420351|G/-|frameshift_variant', 'ENSG00000018510|ENST00000264167|AGPS'] 37163 23313 GVTLGRHRRR True PC9_epitope_Rep2 1206.71700443622 1206.71647496793 95.149 1 -2.3646887923666795 0.45700088504067987 1.0 ['ENST00000493449.5_1_16:322367-324481:-|nuORF'] 81400 7208 PPVPMTQLSK True NCI_RA007_Epitope_Rep1 1096.5950664253198 1096.59396993586 32.027 2 -2.364863868656885 0.45700088504067987 1.0 ['ENST00000556961.1_1_14:92336310-92336571:-|nuORF'] 24549 26911 FALLSDHS True H1975_Epitope_Rep2 888.43413202648 888.43302993586 111.03 2 -2.3651438768496202 0.45700088504067987 1.0 ['MLT1D_dup15897|chr14:30412101-30412608:-|1.011600261695961|0.0585867893101161|4.11|434.0|30|2|anti-sense'] 84719 18294 QHFKVYYP True PC9_epitope_Rep3 1080.5392658013598 1080.5381699358602 75.573 2 -2.365450172365402 0.45700088504067987 1.0 ['nc|ENSG00000196367|Q9Y4A5-2|TRRAP', 'nc|ENSG00000196367|Q9Y4A5|TRRAP', 'ENSG00000196367|ENST00000456197|TRRAP'] 86760 22010 QRLLFVVF True NCI_RA007_Epitope_Rep4 1020.6120368187999 1020.61092993586 95.454 2 -2.3656026418752463 0.45700088504067987 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 120870 12046 VGDSVRVL True PC9_epitope_Rep3 843.48141657207 843.48030993586 51.373 2 -2.3661056734179886 0.45700088504067987 1.0 ['ENST00000599145.1_1_19:58927211-58927334:+|nuORF'] 133667 20206 WKTLKMLNFRL True NCI_RA007_Epitope_Rep4 1448.8326113520798 1448.8309649037901 87.425 3 -2.366431588140078 0.45700088504067987 1.0 ['ENST00000394961.6_1_4:95155160-95155232:+|nuORF'] 53473 25440 KVITVYAAL True PC9_epitope_Rep5 976.5957180483199 976.59462993586 103.09 2 -2.3666588707423304 0.45700088504067987 1.0 ['ENSG00000136051|ENST00000332180|WASHC4', 'nc|ENSG00000136051|Q2M389-2|WASHC4', 'ENST00000311317.8_1_12:105501518-105541426:+|nuORF', 'WASHC4|p.F284Lfs*16|1|0.33|ENSG00000136051|chr12:105126066-105126066|T/-|frameshift_variant'] 112934 24403 TPRASVGN True PC9_epitope_Rep4 800.41406528824 800.41296993586 102.35 2 -2.3670086360474714 0.45700088504067987 1.0 ['nc|ENSG00000188827|Q8IY92-2|SLX4', 'ENSG00000188827|ENST00000294008|SLX4'] 49190 22049 KGPNAIKPNPR True PC9_epitope_Rep6 1190.68838964654 1190.6867549037902 97.746 3 -2.3671954915403814 0.45700088504067987 1.0 ['ENST00000510762.1_1_4:57244622-57253600:-|nuORF'] 128022 25231 VRRGHVAP True PC9_epitope_Rep2 890.5198677694599 890.5193149679301 102.72 1 -2.367204614201949 0.45700088504067987 1.0 ['nc|ENSG00000173826|Q9H252-1|KCNH6', 'nc|ENSG00000173826|Q9H252-2|KCNH6', 'ENSG00000173826|ENST00000314672|KCNH6', 'KCNH2|p.T152Hfs*180|1|0.18|ENSG00000055118|chr7:150959590-150959591|-/G|frameshift_variant', 'nc|ENSG00000173826|Q9H252-3|KCNH6', 'nc|ENSG00000055118|Q12809-4|KCNH2', 'ENSG00000184611|ENST00000332142|KCNH7', 'nc|ENSG00000184611|Q9NS40-2|KCNH7', 'nc|ENSG00000055118|Q12809-5|KCNH2', 'ENSG00000055118|ENST00000262186|KCNH2'] 134848 6199 WYYYSLRFYST True NCI_RA007_Epitope_Rep2 1547.7085159544297 1547.7074099358601 28.72 2 -2.3674244429463247 0.45700088504067987 1.0 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 29839 18440 FVVLIVPM True NCI_RA007_Epitope_Rep3 916.54559705176 916.54448993586 80.714 2 -2.367655534137343 0.45700088504067987 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 121352 21438 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 89.582 2 -2.3677973468565163 0.45700088504067987 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 3815 10807 AGVPWMPAP True H1975_Epitope_Rep2 924.4527592960799 924.4522149679301 46.598 1 -2.3684990545083746 0.4570173380819347 1.0 ['ENSG00000188313|ENST00000342435|PLSCR1', 'ENST00000469266.1_1_3:146246325-146262351:-|nuORF', 'ENST00000494568.5_1_3:146239586-146262297:-|nuORF'] 90782 25237 RKRRPKREKH True PC9_epitope_Rep2 1389.8541666153696 1389.85306993586 102.74 2 -2.3690500112334987 0.4570231278589936 1.0 ['ENSG00000135250|ENST00000393651|SRPK2', 'ENST00000460391.5_3_7:104909300-105029331:-|nuORF', 'ENST00000482862.1_1_7:104909300-105029811:-|nuORF'] 111865 8970 TLRLFPVLPGN True NCI_RA007_Epitope_Rep2 1225.7182927924898 1225.71718993586 39.509 2 -2.369312378765484 0.45703958031220676 1.0 ['nc|ENSG00000186684|Q4G0S4-1|CYP27C1', 'ENSG00000186684|ENST00000664447|CYP27C1', 'nc|ENSG00000186684|Q4G0S4|CYP27C1'] 77776 16181 PACICVHF True NCI_RA007_Epitope_Rep4 888.39861554824 888.39750993586 70.175 2 -2.369535624333845 0.45704536972863463 1.0 ['ENST00000233121.6_1_2:27249948-27250056:+|nuORF'] 90602 24693 RKKDLELHV True PC9_epitope_Rep4 1136.6665915728 1136.66548993586 103.48 2 -2.3697756965767307 0.45705115902160237 1.0 ['ENSG00000101493|ENST00000443185|ZNF516', 'ZNF516|p.P568Qfs*10|2|0.29|ENSG00000101493|chr18:76441348-76441352|GCTGG/-|frameshift_variant'] 48345 26217 KDWLDYRMF True H1975_Epitope_Rep1 1272.59612905448 1272.59502993586 108.89 2 -2.3709997307567363 0.4570676106496636 1.0 ['ENST00000553666.1_1_14:92582502-92582559:-|nuORF'] 41186 22948 IAAAYVRW True PC9_epitope_Rep1 948.51813643396 948.51702993586 93.07 2 -2.3710052603189915 0.4570733995820361 1.0 ['ENST00000369492.4_1_1:116948662-116949561:-|nuORF'] 68638 24343 LVALRHLHF True PC9_epitope_Rep4 1104.65563296628 1104.6545299358602 102.12 2 -2.3713772058820988 0.4571005128533197 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'PRKD1|p.N701S|1|0.75|ENSG00000184304|chr14:29599091-29599091|T/C|missense_variant', 'ENSG00000184304|ENST00000331968|PRKD1'] 121388 23973 VGHSAGHP True PC9_epitope_Rep3 760.36163579256 760.36052993586 97.497 2 -2.3719061225183737 0.4571072159672467 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 97761 16803 SHGPCVPP True NCI_RA007_Epitope_Rep5 792.35885891124 792.35776993586 71.384 2 -2.3719828218925385 0.4571072159672467 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 102981 22759 SQIRTPPSPS True PC9_epitope_Rep5 1068.55637241748 1068.55526993586 92.539 2 -2.3719831397128655 0.4571072159672467 1.0 ['ENST00000514287.1_1_5:139028593-139029007:-|nuORF'] 133252 22270 WEEKPGSG True PC9_epitope_Rep6 888.3977465177597 888.39664993586 98.632 2 -2.3727838354043698 0.4571236659452198 1.0 ['GRM1|p.V1166Rfs*83|1|0.34|ENSG00000152822|chr6:146434701-146434702|-/C|frameshift_variant'] 126664 9122 VPRDEDDP True PC9_epitope_Rep5 941.4090394774498 941.40794993586 40.034 2 -2.373409360428105 0.45712640859710657 1.0 ['ENSG00000214336|ENST00000428390|FOXI3', 'chr2:88448829-88451896|309|10.29|0.06|7.41|-|2|FOXI3,FOXI3|1', 'nc|ENSG00000168269|Q12951-2|FOXI1', 'ENSG00000168269|ENST00000306268|FOXI1', 'ENSG00000186766|ENST00000388920|FOXI2'] 127278 25775 VQLGPGPK True PC9_epitope_Rep5 794.46503823194 794.46394993586 104.54 2 -2.3734850350665613 0.45712640859710657 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 109401 25202 TGPKKFIV True NCI_RA007_Epitope_Rep1 888.5432885526399 888.54274496793 104.28 1 -2.373617034669959 0.45712640859710657 1.0 ['ENSG00000163810|ENST00000296125|TGM4'] 93369 16838 RRVRFNRHRE True PC9_epitope_Rep1 1424.7973800152397 1424.7962899358602 69.593 2 -2.37397117336959 0.45712640859710657 1.0 ['ENST00000345957.8_1_8:82752305-82754488:-|nuORF', 'ENST00000396330.6_1_8:82752600-82754488:-|nuORF'] 1339 7224 AEEDHQLF True H1975_Epitope_Rep2 987.4297749220299 987.42922496793 32.721 1 -2.374005767802008 0.45712640859710657 1.0 ['ENST00000416636.2_1_7:23624683-23625604:-|nuORF'] 92473 18093 RRAAGVVP True H1975_Epitope_Rep3 824.4980696957199 824.49696993586 75.794 2 -2.3740144575563202 0.45712640859710657 1.0 ['ABCB7|p.V548A|1|0.33|ENSG00000131269|chrX:75069023-75069023|A/G|missense_variant'] 127857 23612 VRMVIEYARLR True PC9_epitope_Rep3 1404.8023738529598 1404.80187496793 96.109 1 -2.3746895959317915 0.45715930533789617 1.0 ['ENSG00000049860|ENST00000261416|HEXB'] 130705 4956 VVDGQRFGQ True PC9_epitope_Rep6 1004.5039429217998 1004.50284993586 26.635 2 -2.3751556711699977 0.45715930533789617 1.0 ['ENST00000481714.1_1_2:68520996-68546918:-|nuORF'] 125818 21437 VNLQVYCA True NCI_RA007_Epitope_Rep5 908.4425885351999 908.44148993586 89.519 2 -2.375435125676237 0.4571757531822349 1.0 ['nc|ENSG00000249948|Q9H227|GBA3', 'nc|ENSG00000249948|Q9H227-2|GBA3'] 122577 12892 VGTFNIIV True NCI_RA007_Epitope_Rep3 861.4960040070499 861.49490993586 57.974 2 -2.3762333361353614 0.45719798729265276 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1', 'ENST00000532739.1_1_16:16459039-16460653:+|nuORF'] 123919 17416 VKKAVPKEDI True NCI_RA007_Epitope_Rep5 1125.6757592741699 1125.67411490379 73.775 3 -2.3762864399099874 0.45719798729265276 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 40533 25111 HSPPSTLV True PC9_epitope_Rep1 836.4392174069201 836.43812993586 101.47 2 -2.3768335434564887 0.4571998123827392 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 19783 8359 ELTFLYERH True PC9_epitope_Rep4 1206.6033226098998 1206.6022299358601 39.61 2 -2.376842893143011 0.4571998123827392 1.0 ['ENSG00000155980|ENST00000455537|KIF5A'] 90053 13119 RGGRLPTP True NCI_RA007_Epitope_Rep4 852.49298431528 852.49188993586 57.56 2 -2.3769004114062926 0.4571998123827392 1.0 ['ENST00000374490.7_1_1:24128417-24128612:-|nuORF'] 72882 21871 NATKTKLKQ True PC9_epitope_Rep6 1030.61349337078 1030.6123899358602 97.027 2 -2.3769093615153327 0.4571998123827392 1.0 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'SMARCAD1|p.N347Kfs*4|1|0.46|ENSG00000163104|chr4:94252758-94252759|-/A|frameshift_variant'] 84635 16500 QHDVRLEKLK True NCI_RA007_Epitope_Rep3 1264.7251690780797 1264.7240699358601 72.701 2 -2.377439340477643 0.45723757848394075 1.0 ['CEP350|p.K281R|1|0.25|ENSG00000135837|chr1:179996999-179996999|A/G|missense_variant'] 52381 23824 KPGKAEKSKS True PC9_epitope_Rep4 1058.6084079903399 1058.60730993586 100.06 2 -2.3777714795919254 0.45726468393561454 1.0 ['ENSG00000171467|ENST00000361428|ZNF318', 'ZNF318|p.M1085Afs*3|1|0.24|ENSG00000171467|chr6:43342698-43342699|AT/-|frameshift_variant', 'nc|ENSG00000171467|Q5VUA4-2|ZNF318'] 71176 21054 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 87.995 2 -2.3780905973136095 0.4572704693479443 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 82634 23344 PVLKLLSVHGL True PC9_epitope_Rep6 1174.74377926434 1174.7426899358602 102.9 2 -2.3787781782349273 0.4572829504876619 1.0 ['ENST00000456023.1_1_2:85824088-85824624:+|nuORF'] 93741 19583 RTRLRNRRY True NCI_RA007_Epitope_Rep5 1289.7541182209297 1289.75302993586 82.219 2 -2.378864691448487 0.4572829504876619 1.0 ['CCDC97|p.E232Sfs*48|1|0.27|ENSG00000142039|chr19:41319763-41319763|G/-|frameshift_variant', 'ENSG00000142039|ENST00000269967|CCDC97'] 123312 24622 VHSTHAPT True PC9_epitope_Rep3 848.41406528824 848.41296993586 100.07 2 -2.3791206427637204 0.4572829504876619 1.0 ['nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 130666 17840 VVCVPLLLLP True NCI_RA007_Epitope_Rep4 1064.6667748136 1064.66566993586 77.242 2 -2.3792220145632212 0.4572829504876619 1.0 ['nc|ENSG00000164707|Q9UKG4|SLC13A4', 'ENSG00000164707|ENST00000682651|SLC13A4'] 123250 17459 VHPFHLLV True NCI_RA007_Epitope_Rep3 960.5545219426799 960.55342993586 76.602 2 -2.3796912720831442 0.45729328757487264 1.0 ['CON__Q3SZH5'] 79527 22264 PGRQKIHI True NCI_RA007_Epitope_Rep5 947.5664836087099 947.56538993586 92.786 2 -2.3797624693145236 0.45729328757487264 1.0 ['RPL10L|p.A68Tfs*10|1|0.14|ENSG00000165496|chr14:46651534-46651536|GCG/TT|frameshift_variant', 'ENSG00000165496|ENST00000298283|RPL10L', 'ENSG00000147403|ENST00000369817|RPL10', 'ENST00000491035.5_1_X:153628724-153629192:+|nuORF'] 18223 13937 EIRSEKEHPTT True H1975_Epitope_Rep1 1325.6575430107298 1325.65644993586 58.763 2 -2.3806623173489334 0.45729328757487264 1.0 ['CAMK2D-ANK2|3|fusion', 'ENSG00000145362|ENST00000357077|ANK2', 'ANK2|p.K2477Rfs*2|1|0.24|ENSG00000145362|chr4:113356046-113356046|A/-|frameshift_variant'] 10689 23324 CSHCANQV True NCI_RA007_Epitope_Rep4 860.3269071599599 860.32580993586 101.28 2 -2.380834529114001 0.45729328757487264 1.0 ['L1ME1_dup20737|chr11:12960950-12961643:-|1.693443910812395|0.3279391910638228|2.37|477.0|9|2|sense'] 107989 17836 TCRQSEGP True NCI_RA007_Epitope_Rep5 876.3759655273599 876.37486993586 75.404 2 -2.3814210966749116 0.45729328757487264 1.0 ['ENST00000475488.3_1_7:149493482-149494663:+|nuORF'] 90184 21972 RHHKEKIK True PC9_epitope_Rep6 1074.6410455313 1074.6399499358602 97.434 2 -2.3814786414399265 0.45729328757487264 1.0 ['ENSG00000260916|ENST00000442196|CCPG1', 'ZNF33B-CCPG1|3|fusion', 'nc|ENSG00000260916|Q9ULG6-4|CCPG1', 'nc|ENSG00000260916|Q9ULG6-2|CCPG1', 'ENST00000568372.5_1_15:55651699-55664264:-|nuORF', 'nc|ENSG00000260916|Q9ULG6|CCPG1', 'ZNF33B-CCPG1|1|fusion', 'CCPG1|p.R563Kfs*79|1|0.19|ENSG00000260916|chr15:55360085-55360085|C/-|frameshift_variant'] 42811 23803 IFITKALQ True NCI_RA007_Epitope_Rep3 932.5695033004799 932.56840993586 103.15 2 -2.3817018254762936 0.45729328757487264 1.0 ['nc|ENSG00000176273|Q2M3R5-2|SLC35G1', 'ENSG00000176273|ENST00000427197|SLC35G1'] 11414 21494 DFLQMGPS True PC9_epitope_Rep2 893.3953039896099 893.39475496793 88.147 1 -2.3818425223836495 0.45729328757487264 1.0 ['ENST00000373991.3_1_20:34542651-34542879:-|nuORF'] 58959 10480 LFYIPPGY True NCI_RA007_Epitope_Rep2 968.5007550343198 968.49964993586 45.358 2 -2.381935911510356 0.45729328757487264 1.0 ['SZT2|p.S539Y|1|0.15|ENSG00000198198|chr1:43421293-43421293|C/A|missense_variant'] 90075 25449 RGPFKKER True H1975_Epitope_Rep3 1016.5879473292798 1016.58737496793 105.87 1 -2.3821480139622366 0.45729328757487264 1.0 ['ENST00000337979.8_1_11:59522641-59522929:+|nuORF'] 29837 24066 FVVLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 100.29 2 -2.3827811094820404 0.45729328757487264 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 78938 23050 PFFKKPFFFH True PC9_epitope_Rep6 1340.7069998327997 1340.70590993586 101.76 2 -2.3830926599007607 0.45729907169578055 1.0 ['ENST00000377102.5_1_13:80913253-80913610:-|nuORF'] 23064 16421 EVLCKNLA True NCI_RA007_Epitope_Rep4 888.4738886634799 888.47278993586 71.171 2 -2.3834914033278216 0.45730576574656295 1.0 ['ENSG00000125107|ENST00000317147|CNOT1', 'nc|ENSG00000125107|A5YKK6-2|CNOT1', 'nc|ENSG00000125107|A5YKK6-3|CNOT1', 'nc|ENSG00000125107|A5YKK6-4|CNOT1'] 117115 23697 TYSHKIVK True NCI_RA007_Epitope_Rep5 974.5549158654999 974.55380993586 98.488 2 -2.383595835241449 0.45730576574656295 1.0 ['DUXA|p.M10I|1|0.12|ENSG00000258873|chr19:57160793-57160793|C/A|missense_variant'] 121240 6994 VGGRAMAH True H1975_Epitope_Rep3 797.39664140229 797.39554993586 31.864 2 -2.3836893810366027 0.45730576574656295 1.0 ['ENST00000452600.1_1_2:130987586-130988813:+|nuORF'] 81058 11469 PPARFGAQ True H1975_Epitope_Rep2 842.4398861132597 842.43878993586 49.17 2 -2.3848740349296613 0.45733377383223384 1.0 ['ENSG00000101191|ENST00000395343|DIDO1'] 61081 5113 LLAVTFAA True PC9_epitope_Rep6 804.47454028648 804.47344993586 27.352 2 -2.3849879498164137 0.45733377383223384 1.0 ['nc|ENSG00000128040|P20155|SPINK2'] 112742 23040 TPKKNKHKR True PC9_epitope_Rep5 1135.6938093801498 1135.6927099358602 93.614 2 -2.3851287436598687 0.45733377383223384 1.0 ['ENSG00000143947|ENST00000272317|RPS27A', 'ENST00000478196.6_1_2:55459960-55462152:+|nuORF'] 82976 7883 PYCGVEVW True H1975_Epitope_Rep2 951.4160394341899 951.41549496793 35.268 1 -2.3854586300161573 0.45734046634553904 1.0 ['ENST00000595444.1_2_19:17417259-17417352:+|nuORF'] 39291 14905 HLQAFVLH True NCI_RA007_Epitope_Rep4 963.52903547083 963.52848496793 64.796 1 -2.3859075094108495 0.45734046634553904 1.0 ['ENSG00000213927|ENST00000259631|CCL27'] 125781 25170 VNKPQWHKP True PC9_epitope_Rep2 1132.61416207712 1132.61306993586 102.48 2 -2.386062860552109 0.45734046634553904 1.0 ['ENSG00000109756|ENST00000691494|RAPGEF2', 'nc|ENSG00000109756|Q9Y4G8|RAPGEF2'] 70067 13193 LYHPFIAG True PC9_epitope_Rep5 916.4806882960798 916.4801349679301 55.753 1 -2.3862606917953766 0.45734104785346674 1.0 ['ENSG00000163482|ENST00000295709|STK36', 'STK36|p.E1226Pfs*43|1|0.22|ENSG00000163482|chr2:218699219-218699244|AGAGGAGCTGTTACAGTGCGAAGTAC/-|frameshift_variant', 'nc|ENSG00000163482|Q9NRP7-2|STK36', 'STK36|p.K295Rfs*8|1|0.33|ENSG00000163482|chr2:218679659-218679659|C/-|frameshift_variant'] 133540 14711 WHKASRFL True H1975_Epitope_Rep1 1043.5664836087099 1043.5653899358601 61.804 2 -2.3862738221999344 0.45734104785346674 1.0 ['chr12:48492995-48494801|179|10.17|0.33|4.95|+|0|C12orf54,None|1'] 68753 18140 LVDMAKKL True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 79.474 2 -2.3863816008466134 0.45734104785346674 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 20785 4324 EQLYHPNIVRY True NCI_RA007_Epitope_Rep1 1430.73064838134 1430.7295499358602 20.926 2 -2.3865552896199165 0.45734104785346674 1.0 ['ENSG00000163491|ENST00000691995|NEK10', 'nc|ENSG00000163491|Q6ZWH5|NEK10', 'nc|ENSG00000163491|Q6ZWH5-4|NEK10', 'nc|ENSG00000163491|Q6ZWH5-2|NEK10'] 34028 19360 GNLFMILLIRT True NCI_RA007_Epitope_Rep4 1289.7529640490498 1289.7518699358602 83.732 2 -2.3869029573599665 0.45734104785346674 1.0 ['OR5M1|p.C44F|1|0.83|ENSG00000255012|chr11:56613372-56613372|C/A|missense_variant'] 32536 19527 GGSKGLVR True H1975_Epitope_Rep3 772.4555361774 772.45442993586 81.825 2 -2.387199579491969 0.45734104785346674 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'nc|ENSG00000149527|O75038-5|PLCH2'] 130690 21114 VVDEYVDRIL True H1975_Epitope_Rep3 1219.6448530687098 1219.6437499358601 88.193 2 -2.3874654666563644 0.45734104785346674 1.0 ['TDRD5|p.G630R|1|0.21|ENSG00000162782|chr1:179650954-179650954|G/A|missense_variant'] 29432 21611 FVGPGRPGE True H1975_Epitope_Rep3 914.4610154806599 914.45990993586 90.297 2 -2.3875363847850193 0.45734104785346674 1.0 ['ENSG00000079432|ENST00000681038|CIC'] 49150 15937 KGLGGTRH True NCI_RA007_Epitope_Rep3 824.461684187 824.46058993586 70.35 2 -2.3881711603912223 0.45734104785346674 1.0 ['ENST00000305850.9_1_16:81040200-81040455:+|nuORF'] 43770 22723 IIYLKKPM True PC9_epitope_Rep4 1004.60925993748 1004.60816993586 95.625 2 -2.38822072841677 0.45734104785346674 1.0 ['ENST00000480294.1_1_6:10891760-10930631:+|nuORF', 'ENSG00000153157|ENST00000283141|SYCP2L'] 22754 12697 EVAPGKTHTDP True PC9_epitope_Rep3 1150.5618517207402 1150.56074993586 53.863 2 -2.3882298787517464 0.45734104785346674 1.0 ['ENSG00000183638|ENST00000382483|RP1L1'] 52115 24809 KLQRRWKR True NCI_RA007_Epitope_Rep5 1169.7257782147697 1169.7246899358602 102.92 2 -2.388399334730195 0.45734104785346674 1.0 ['ENST00000593704.1_1_19:35835757-35836128:+|nuORF', 'nc|ENSG00000012124|P20273-2|CD22', 'nc|ENSG00000012124|P20273-5|CD22', 'nc|ENSG00000012124|P20273-4|CD22', 'nc|ENSG00000012124|P20273-3|CD22', 'ENSG00000012124|ENST00000085219|CD22'] 68637 25113 LVALRHLHF True PC9_epitope_Rep2 1104.65563296628 1104.6545299358602 102.26 2 -2.3884932582222635 0.45734104785346674 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'PRKD1|p.N701S|1|0.75|ENSG00000184304|chr14:29599091-29599091|T/C|missense_variant', 'ENSG00000184304|ENST00000331968|PRKD1'] 121351 21320 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 89.074 2 -2.389007818273385 0.45735261211921024 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 7066 23207 AQVRGGMV True PC9_epitope_Rep4 816.4276071773999 816.4265099358599 97.494 2 -2.389241275293375 0.45735261211921024 1.0 ['nc|ENSG00000086205|Q04609-6|FOLH1', 'nc|ENSG00000086205|Q04609-3|FOLH1', 'nc|ENSG00000086205|Q04609-9|FOLH1', 'nc|ENSG00000086205|Q04609-8|FOLH1', 'nc|ENSG00000086205|Q04609-7|FOLH1', 'ENSG00000086205|ENST00000256999|FOLH1', 'FOLH1|p.Q79Kfs*31|1|0.22|ENSG00000086205|chr11:49200431-49200431|G/TT|frameshift_variant', 'nc|ENSG00000086205|Q04609-10|FOLH1', 'nc|ENSG00000290503|Q9HBA9|FOLH1B', 'ENST00000529567.5_1_11:89372457-89431764:+|nuORF'] 29824 24171 FVVLIVPM True H1975_Epitope_Rep1 916.54559705176 916.54448993586 100.26 2 -2.3896348075908 0.457369049141201 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 82290 24036 PTPHTSEP True H1975_Epitope_Rep3 864.39774651776 864.39664993586 100.16 2 -2.389966487532428 0.45738061244059924 1.0 ['GPRIN3|p.L270H|2|0.28|ENSG00000185477|chr4:89249302-89249302|A/T|missense_variant'] 68636 24604 LVALRHLHF True NCI_RA007_Epitope_Rep5 1104.65563296628 1104.6545299358602 102.11 2 -2.390030151368598 0.45738061244059924 1.0 ['nc|ENSG00000105287|Q9BZL6-3|PRKD2', 'ENST00000599019.5_1_19:47177782-47200527:-|nuORF', 'ENSG00000105287|ENST00000291281|PRKD2', 'ENST00000597589.5_1_19:47177782-47200527:-|nuORF', 'nc|ENSG00000105287|Q9BZL6-2|PRKD2', 'PRKD1|p.N701S|1|0.75|ENSG00000184304|chr14:29599091-29599091|T/C|missense_variant', 'ENSG00000184304|ENST00000331968|PRKD1'] 103857 24704 SRKKNLYL True NCI_RA007_Epitope_Rep5 1020.6080140675199 1020.6074749679301 102.51 1 -2.3902390142743104 0.457381520627344 1.0 ['ENST00000455385.6_1_7:105731866-105731917:-|nuORF'] 85643 6526 QLQEEYTRYLF True H1975_Epitope_Rep1 1488.72489429456 1488.7232549037901 30.16 3 -2.3903203450784267 0.457381520627344 1.0 ['ENSG00000006607|ENST00000264042|FARP2', 'nc|ENSG00000006607|O94887-3|FARP2', 'FARP2|p.H590Qfs*52|1|0.12|ENSG00000006607|chr2:241463425-241463426|-/A|frameshift_variant', 'nc|ENSG00000006607|O94887-2|FARP2'] 131568 23165 VVVRHPLS True H1975_Epitope_Rep2 905.5446855349699 905.54358993586 95.564 2 -2.3906283518384654 0.4573824287753841 1.0 ['ENSG00000145246|ENST00000273859|ATP10D', 'nc|ENSG00000145246|Q9P241-2|ATP10D'] 125634 18017 VMFLLKYL True NCI_RA007_Epitope_Rep1 1025.59836090061 1025.5972699358601 74.221 2 -2.390690458543273 0.4573824287753841 1.0 ['OR4A5|p.T32K|1|0.2|ENSG00000221840|chr11:54706979-54706979|C/A|missense_variant'] 25905 23607 FGKVKVGK True PC9_epitope_Rep6 861.5436229058098 861.54252993586 103.95 2 -2.3913794173169785 0.4574152993820584 1.0 ['ENSG00000132356|ENST00000397128|PRKAA1', 'nc|ENSG00000132356|Q13131-2|PRKAA1', 'ENST00000511248.1_1_5:40777545-40798228:-|nuORF', 'ENST00000397006.2_1_5:40777312-40798264:-|nuORF'] 122520 17111 VGSSTTRL True PC9_epitope_Rep4 819.44503106335 819.44392993586 73.821 2 -2.391400098425076 0.4574152993820584 1.0 ['ENST00000448022.1_1_7:114563557-114563668:+|nuORF'] 29835 23399 FVVLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 97.67 2 -2.392359234846654 0.4574317341600878 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 908 5262 ADPHNATLI True PC9_epitope_Rep4 950.48214484806 950.48159496793 26.94 1 -2.39303657609729 0.45744329501507514 1.0 ['ENSG00000143669|ENST00000389793|LYST', 'LYST|p.L2265Ifs*29|1|0.34|ENSG00000143669|chr1:235759054-235759060|CAACAAG/-|frameshift_variant', 'nc|ENSG00000143669|Q99698-2|LYST', 'ENST00000489585.5_1_1:235926109-235996891:-|nuORF', 'ENST00000492844.1_1_1:235950498-235952065:-|nuORF', 'LYST|p.P1623Lfs*25|1|0.25|ENSG00000143669|chr1:235782082-235782082|G/-|frameshift_variant'] 110802 17035 TKRALPNN True NCI_RA007_Epitope_Rep4 912.51411368268 912.5130099358599 73.81 2 -2.3932841606209707 0.45744329501507514 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53'] 127160 5105 VQELAATHH True PC9_epitope_Rep6 1004.5039429218 1004.50284993586 27.318 2 -2.393624366575677 0.4574548553774037 1.0 ['SPTA1|p.A1704T|1|0.34|ENSG00000163554|chr1:158638112-158638112|C/T|missense_variant'] 107595 9308 TAGCPCPLH True H1975_Epitope_Rep3 897.38369376009 897.3831449679301 40.798 1 -2.393743157190068 0.4574548553774037 1.0 ['ENST00000316846.2_11:65545686-65545905:-|nuORF'] 3458 22972 AGLKRHTAQL True PC9_epitope_Rep3 1093.63562579769 1093.6345299358602 93.627 2 -2.394541525337447 0.4574819423433405 1.0 ['BIRC6|p.A4796G|1|0.59|ENSG00000115760|chr2:32611575-32611575|C/G|missense_variant'] 7562 16909 ASFWPFGP True H1975_Epitope_Rep2 907.4228390667898 907.42229496793 70.287 1 -2.394706140544356 0.45748284825499635 1.0 ['ENSG00000162009|ENST00000689027|SSTR5'] 40259 23424 HRLLPLLN True H1975_Epitope_Rep1 974.60253476426 974.60142993586 97.348 2 -2.3947268246558195 0.45748284825499635 1.0 ['nc|ENSG00000197467|Q5TAT6-10|COL13A1', 'nc|ENSG00000197467|Q5TAT6-8|COL13A1', 'ENSG00000197467|ENST00000645393|COL13A1'] 79440 25024 PGPKRERLI True NCI_RA007_Epitope_Rep5 1064.6454622054 1064.6443699358601 103.76 2 -2.395251312074319 0.45750993405703694 1.0 ['ENSG00000101407|ENST00000373447|TTI1'] 121355 22034 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 92.135 2 -2.3955088255333186 0.4575117445910965 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 63572 25441 LPLIPVLEQ True PC9_epitope_Rep3 1020.6219327961599 1020.62082993586 103.3 2 -2.395543999304226 0.4575117445910965 1.0 ['OLFM3|p.E132Q|1|0.29|ENSG00000118733|chr1:101830710-101830710|C/G|missense_variant', 'nc|ENSG00000118733|Q96PB7-6|OLFM3', 'nc|ENSG00000118733|Q96PB7-4|OLFM3', 'nc|ENSG00000118733|Q96PB7-2|OLFM3', 'nc|ENSG00000118733|Q96PB7-5|OLFM3', 'OLFM3|p.T403Hfs*9|1|0.24|ENSG00000118733|chr1:101804469-101804469|C/-|frameshift_variant', 'ENSG00000118733|ENST00000370103|OLFM3', 'nc|ENSG00000118733|Q96PB7|OLFM3'] 86758 21789 QRLLFVVF True NCI_RA007_Epitope_Rep3 1020.6120368187999 1020.61092993586 94.665 2 -2.3956368609251206 0.4575117445910965 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 29526 9526 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 43.493 3 -2.3956739566206253 0.4575117445910965 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 123112 16646 VHCRGGCS True NCI_RA007_Epitope_Rep3 817.33232689357 817.3317749679301 73.269 1 -2.3958880854003834 0.457517523488932 1.0 ['ENSG00000146399|ENST00000275216|TAAR1', 'TAAR1|p.F186I|1|0.24|ENSG00000146399|chr6:132645448-132645448|A/T|missense_variant'] 121400 22012 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 97.592 2 -2.396065791332967 0.45752330226364846 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 136959 23438 YKIRSQAIH True PC9_epitope_Rep6 1114.6247267608198 1114.6236299358602 103.26 2 -2.3966587178085175 0.4575397332651583 1.0 ['ENSG00000065427|ENST00000302445|KARS1', 'nc|ENSG00000065427|Q15046-2|KARS1', 'ENST00000566560.5_1_16:75668010-75682538:-|nuORF', 'ENST00000565738.1_1_16:75674022-75675473:-|nuORF'] 125017 22255 VLPAAQLR True H1975_Epitope_Rep3 866.5337864981 866.53268993586 93.067 2 -2.396890920526596 0.45754551168017726 1.0 ['nc|ENSG00000169727|Q13098-6|GPS1', 'ENST00000578552.5_2_17:80015029-80015326:+|nuORF'] 132267 5502 VYLCQSENSCL True PC9_epitope_Rep1 1257.53695949585 1257.53586993586 25.993 2 -2.3972240952867176 0.45755128997209144 1.0 ['ENSG00000158683|ENST00000289672|PKD1L1', 'nc|ENSG00000158683|Q8TDX9-2|PKD1L1', 'PKD1L1|p.G2269Afs*6|1|0.24|ENSG00000158683|chr7:47827398-47827398|C/-|frameshift_variant', 'PKD1L1|p.R1956Pfs*77|1|0.33|ENSG00000158683|chr7:47836996-47836997|GC/-|frameshift_variant'] 97751 19427 SHGPCVPP True H1975_Epitope_Rep2 792.35885891124 792.35776993586 80.633 2 -2.398307669114837 0.45762098019791436 1.0 ['ENST00000599938.5_1_19:8942076-8942876:-|nuORF'] 119699 11546 VETDQRKM-[Oxidation] True H1975_Epitope_Rep1 1021.4862446327699 1021.4856749679301 49.398 1 -2.398712315726843 0.45762766025436186 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 38273 20971 HFGFILLM True H1975_Epitope_Rep1 976.52044493308 976.51934993586 87.111 2 -2.398935797601043 0.45762766025436186 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 10248 22076 CFPHSTMF True H1975_Epitope_Rep3 968.38844478736 968.38734993586 92.317 2 -2.399320410914583 0.45762766025436186 1.0 ['ENST00000557778.1_1_14:102100909-102101767:-|nuORF'] 124479 24996 VLFASSHT True PC9_epitope_Rep2 860.43921740692 860.43812993586 101.81 2 -2.399774823878099 0.4576300067093366 1.0 ['ENSG00000127586|ENST00000262315|CHTF18', 'nc|ENSG00000127586|Q8WVB6-2|CHTF18', 'nc|ENSG00000127586|Q8WVB6-3|CHTF18'] 114212 20702 TRVLVLHR True PC9_epitope_Rep6 992.6243328379999 992.62322993586 92.392 2 -2.4001461014520618 0.4576300067093366 1.0 ['ENST00000528694.1_1_11:829540-829996:+|nuORF'] 55552 20503 LCARSTSG True PC9_epitope_Rep2 793.37523725137 793.37412993586 84.295 2 -2.4008186877698794 0.4576300067093366 1.0 ['ZNF488|p.D289Tfs*48|1|0.41|ENSG00000265763|chr10:47367965-47367965|C/-|frameshift_variant'] 43384 5684 IHQAGGSPPA True PC9_epitope_Rep2 933.4668291370899 933.4657299358599 27.251 2 -2.4011261522187177 0.4576300067093366 1.0 ['ENSG00000141564|ENST00000306801|RPTOR', 'nc|ENSG00000141564|Q8N122-3|RPTOR'] 124091 15946 VKSLGTGQ True NCI_RA007_Epitope_Rep2 788.4392174069199 788.43812993586 66.743 2 -2.40172796714488 0.4576300067093366 1.0 ['nc|ENSG00000095539|Q9NTN9-3|SEMA4G'] 60968 22702 LLAFAKNL True NCI_RA007_Epitope_Rep1 888.54328855264 888.54218993586 93.088 2 -2.401747118059157 0.4576300067093366 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-3|MCMDC2'] 24551 26526 FALLSDHS True H1975_Epitope_Rep3 888.43413202648 888.43302993586 110.75 2 -2.4020012567732723 0.4576300067093366 1.0 ['MLT1D_dup15897|chr14:30412101-30412608:-|1.011600261695961|0.0585867893101161|4.11|434.0|30|2|anti-sense'] 60393 26203 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 106.84 3 -2.4021540622882607 0.4576300067093366 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 125780 24660 VNKPQWHKP True NCI_RA007_Epitope_Rep5 1132.61416207712 1132.61306993586 102.34 2 -2.402404059573686 0.4576300067093366 1.0 ['ENSG00000109756|ENST00000691494|RAPGEF2', 'nc|ENSG00000109756|Q9Y4G8|RAPGEF2'] 85212 19989 QKHPLVFL True NCI_RA007_Epitope_Rep3 980.5807366905199 980.57962993586 87.114 2 -2.402460559717421 0.4576300067093366 1.0 ['ENST00000296657.6_1_5:10653441-10653774:+|nuORF'] 133518 13281 WHGGEDEA True NCI_RA007_Epitope_Rep4 899.3409599176299 899.33986993586 58.222 2 -2.403043851419425 0.4576300067093366 1.0 ['ENSG00000083828|ENST00000396154|ZNF586', 'nc|ENSG00000083828|Q9NXT0-3|ZNF586', 'ENST00000396150.4_1_19:58281140-58291161:+|nuORF'] 87418 8179 QTDWTEPWLM True NCI_RA007_Epitope_Rep1 1305.5699738762899 1305.5688699358602 35.811 2 -2.403111601440135 0.4576300067093366 1.0 ['nc|ENSG00000151353|Q96B42-2|TMEM18', 'ENST00000477202.1_1_2:669582-675654:-|nuORF', 'ENSG00000151353|ENST00000281017|TMEM18'] 92651 26237 RRFPKKWERPV True PC9_epitope_Rep1 1497.8680853440098 1497.8664449037901 106.31 3 -2.4033287294529906 0.4576300067093366 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 10974 22354 DCPDGYDE True H1975_Epitope_Rep2 912.28072772984 912.27962993586 92.379 2 -2.403412947561952 0.4576300067093366 1.0 ['ENSG00000168702|ENST00000389484|LRP1B', 'LRP1B|p.R3361Lfs*17|1|0.24|ENSG00000168702|chr2:140444655-140444656|-/A|frameshift_variant', 'LRP1B|p.P3359Qfs*54|1|0.29|ENSG00000168702|chr2:140444661-140444661|G/-|frameshift_variant', 'LRP1B|p.P3292Lfs*121|1|0.15|ENSG00000168702|chr2:140456543-140456543|G/-|frameshift_variant', 'LRP1B|p.C2689Ffs*8|1|0.18|ENSG00000168702|chr2:140516972-140516972|C/-|frameshift_variant', 'LRP1B|p.R2777Dfs*83|1|0.22|ENSG00000168702|chr2:140509997-140509997|G/-|frameshift_variant', 'LRP1B|p.E566Ifs*12|2|0.45|ENSG00000168702|chr2:141049073-141049079|TGGTTTC/-|frameshift_variant', 'LRP1B|p.K791Nfs*10|1|0.27|ENSG00000168702|chr2:141013563-141013563|C/-|frameshift_variant', 'LRP1B|p.D995Tfs*184|1|0.45|ENSG00000168702|chr2:140950388-140950388|C/-|frameshift_variant'] 96860 7031 SESQGSGVFLP True PC9_epitope_Rep5 1106.5244035828598 1106.5233099358602 32.014 2 -2.403426313782689 0.4576300067093366 1.0 ['ENSG00000173145|ENST00000371361|NOC3L'] 46110 20358 ITAAVLGAF True PC9_epitope_Rep5 861.4960040070499 861.49490993586 83.342 2 -2.4036428278854403 0.4576300067093366 1.0 ['ENSG00000184497|ENST00000375353|TMEM255B'] 107395 4147 SYSWTAWR True PC9_epitope_Rep2 1055.4824792012298 1055.48138993586 21.253 2 -2.4037268590476244 0.4576300067093366 1.0 ['nc|ENSG00000008710|P98161-2|PKD1', 'nc|ENSG00000008710|P98161-3|PKD1', 'ENSG00000008710|ENST00000262304|PKD1'] 86759 22103 QRLLFVVF True NCI_RA007_Epitope_Rep3 1020.6120368187999 1020.61092993586 96.044 2 -2.4039837629284913 0.45763090914899734 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 103041 23225 SQKSSVKELLK True PC9_epitope_Rep3 1245.7292513990099 1245.72814993586 94.61 2 -2.40401989258822 0.45763090914899734 1.0 ['ENSG00000240563|ENST00000498273|L1TD1'] 28733 5966 FSWFWFRLYWF True H1975_Epitope_Rep1 1683.8026911227896 1683.8010449037902 28.019 3 -2.4045239997729366 0.4576318115502167 1.0 ['nc|ENSG00000223802|P27544-2|CERS1', 'ENSG00000223802|ENST00000623882|CERS1'] 53478 24013 KVKSPGPH True H1975_Epitope_Rep3 848.4868363056798 848.48572993586 100.07 2 -2.4046155479974116 0.4576318115502167 1.0 ['ENST00000510048.1_1_4:74964514-74964837:-|nuORF', 'ENSG00000081041|ENST00000508487|CXCL2'] 60391 26057 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 106.15 3 -2.404654119409853 0.45763758732322374 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 48346 26174 KDWLDYRMF True H1975_Epitope_Rep3 1272.59612905448 1272.59502993586 109.08 2 -2.4047375232743122 0.4576433629732176 1.0 ['ENST00000553666.1_1_14:92582502-92582559:-|nuORF'] 81461 26309 PQLEVVLFV True PC9_epitope_Rep1 1042.60628273202 1042.6051899358602 106.65 2 -2.4052197018978183 0.45766068918515995 1.0 ['nc|ENSG00000204700|O76002|OR2J2', 'ENSG00000204700|ENST00000641417|OR2J2'] 44593 13312 IPGSVESQRV True H1975_Epitope_Rep2 1070.57202248162 1070.57092993586 56.334 2 -2.4053773420041225 0.45766068918515995 1.0 ['ENSG00000126773|ENST00000406854|PCNX4', 'ENST00000483571.5_1_14:60582139-60592559:+|nuORF'] 92361 23662 RQPVTMET True NCI_RA007_Epitope_Rep5 960.4698659122 960.46876993586 98.343 2 -2.40547946975266 0.45766068918515995 1.0 ['ENST00000563252.2_1_16:30368148-30368268:+|nuORF'] 59892 18037 LHHGPLCL True H1975_Epitope_Rep1 888.46399268612 888.46288993586 75.158 2 -2.4063089112257012 0.4576780142901258 1.0 ['ENST00000522759.1_1_8:21986032-21988020:-|nuORF', 'HR|p.S374Afs*6|1|0.2|ENSG00000168453|chr8:22127323-22127323|G/-|frameshift_variant', 'nc|ENSG00000168453|O43593-2|HR', 'ENSG00000168453|ENST00000381418|HR'] 68763 20566 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 86.046 2 -2.406322725527379 0.4576780142901258 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 121353 21519 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 89.926 2 -2.406488248635734 0.4576780142901258 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 36025 16849 GVDLTVRVL True PC9_epitope_Rep4 970.58113061334 970.58002993586 72.791 2 -2.406774855998558 0.45767891559209056 1.0 ['nc|ENSG00000036257|Q13618-2|CUL3', 'ENSG00000036257|ENST00000264414|CUL3', 'CUL3|p.K610Nfs*44|1|0.31|ENSG00000036257|chr2:224495844-224495844|T/-|frameshift_variant', 'nc|ENSG00000036257|Q13618-3|CUL3'] 110801 14684 TKRALPNN True NCI_RA007_Epitope_Rep4 912.51411368268 912.5130099358599 63.897 2 -2.4069019406134546 0.45767891559209056 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53'] 86448 19612 QQRQRRRLPP True NCI_RA007_Epitope_Rep4 1333.7803329687697 1333.77922993586 84.747 2 -2.4074983421116287 0.4576953382882211 1.0 ['ENST00000298585.2_1_9:140476760-140476931:-|nuORF'] 10965 20036 DCGGGAGP True NCI_RA007_Epitope_Rep5 632.22242500808 632.22187496793 83.99 1 -2.408371313758431 0.45774370441356543 1.0 ['ENSG00000171786|ENST00000302101|NHLH1'] 68762 20360 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 85.251 2 -2.4086668437884686 0.4577446042782457 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 10247 21911 CFPHSTMF True H1975_Epitope_Rep3 968.38844478736 968.38734993586 91.6 2 -2.4091273838709406 0.4577446042782457 1.0 ['ENST00000557778.1_1_14:102100909-102101767:-|nuORF'] 51930 11010 KKSSLVPSTA True PC9_epitope_Rep4 1016.5866099166 1016.58550993586 50.127 2 -2.409584653754457 0.45775037798930984 1.0 ['ENSG00000139767|ENST00000267260|SRRM4'] 104584 26593 SSSSSSGT True H1975_Epitope_Rep3 698.2718772983001 698.27132496793 111.04 1 -2.409715665662358 0.45775127768313456 1.0 ['ENSG00000101350|ENST00000375712|KIF3B', 'nc|ENSG00000101350|O15066-2|KIF3B'] 71335 22113 MHIVADLY True NCI_RA007_Epitope_Rep5 960.47388866348 960.47278993586 92.189 2 -2.409775913606062 0.45775127768313456 1.0 ['FRY|p.M2908Cfs*5|1|0.3|ENSG00000073910|chr13:32294509-32294509|A/-|frameshift_variant', 'ENSG00000073910|ENST00000542859|FRY'] 25140 24846 FDPSKIPKLKL True NCI_RA007_Epitope_Rep1 1284.78055869588 1284.77997496793 102.85 1 -2.410263353358082 0.4577521773386427 1.0 ['ENSG00000105248|ENST00000262962|YJU2'] 52383 23285 KPGKDIRN True PC9_epitope_Rep5 926.52976374682 926.52866993586 94.549 2 -2.410288992157459 0.4577521773386427 1.0 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 71507 22137 MKPAIAPK True PC9_epitope_Rep2 854.5047948689399 854.50368993586 90.628 2 -2.4107842464130997 0.4577536008175692 1.0 ['nc|ENSG00000180263|Q6ZV73-2|FGD6', 'ENSG00000180263|ENST00000343958|FGD6'] 62711 5945 LLYCAIKQQM True NCI_RA007_Epitope_Rep4 1209.62498665461 1209.62388993586 29.487 2 -2.4108183684946582 0.4577536008175692 1.0 ['ENSG00000130827|ENST00000369682|PLXNA3', 'ENST00000491066.1_1_X:153697015-153697611:+|nuORF'] 27477 16691 FNWKRHRLFNH True NCI_RA007_Epitope_Rep2 1553.8116330970497 1553.8105299358601 69.657 2 -2.4111197595600258 0.4577536008175692 1.0 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000469739.6_1_17:18188617-18210429:-|nuORF', 'nc|ENSG00000177302|Q13472-3|TOP3A'] 124003 16841 VKKTTEAT True NCI_RA007_Epitope_Rep5 876.4916469026 876.49054993586 71.528 2 -2.4112120201561624 0.4577536008175692 1.0 ['ENST00000537556.1_1_12:64238596-64474299:+|nuORF', 'SRGAP1|p.Y944*|1|0.22|ENSG00000196935|chr12:64128147-64128160|CAATACACGGGCTT/-|frameshift_variant', 'nc|ENSG00000196935|Q7Z6B7-2|SRGAP1', 'ENSG00000196935|ENST00000355086|SRGAP1'] 140380 13508 YYELWWFWLLW True NCI_RA007_Epitope_Rep2 1703.8176724805896 1703.8165699358601 57.188 2 -2.41127974494508 0.4577536008175692 1.0 ['ENST00000473467.5_1_2:74685729-74687181:+|nuORF', 'ENST00000441673.2_1_2:74684653-74687805:+|nuORF', 'ENST00000452361.5_1_2:74684918-74687805:+|nuORF', 'ENSG00000239779|ENST00000233615|WBP1'] 140780 15855 YYRQGCAS True NCI_RA007_Epitope_Rep5 946.3967009719398 946.39560993586 67.706 2 -2.411334826057101 0.4577536008175692 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 43481 27028 IHVKMTKFGF True PC9_epitope_Rep2 1206.65833538822 1206.6572299358602 111.32 2 -2.411725725814428 0.4577536008175692 1.0 ['ENST00000534472.5_1_11:125465789-125479519:+|nuORF'] 44046 24894 ILLELIQYDNR True H1975_Epitope_Rep2 1388.76636518372 1388.76526993586 102.33 2 -2.41232263732998 0.4577536008175692 1.0 ['ENSG00000155754|ENST00000439140|C2CD6', 'nc|ENSG00000155754|Q53TS8-2|C2CD6', 'nc|ENSG00000155754|Q53TS8-1|C2CD6', 'nc|ENSG00000155754|Q53TS8-3|C2CD6'] 38231 9003 HEWAGGGG True PC9_epitope_Rep2 769.3143512469697 769.3138049679301 39.982 1 -2.412425154910934 0.4577536008175692 1.0 ['ENSG00000171094|ENST00000389048|ALK'] 24548 26758 FALLSDHS True H1975_Epitope_Rep2 888.43413202648 888.43302993586 110.35 2 -2.4124847403369705 0.4577536008175692 1.0 ['MLT1D_dup15897|chr14:30412101-30412608:-|1.011600261695961|0.0585867893101161|4.11|434.0|30|2|anti-sense'] 71868 8848 MPMLLWRLSWK True PC9_epitope_Rep1 1459.7832186315102 1459.78156490379 38.875 3 -2.4126127813708123 0.4577536008175692 1.0 ['ENST00000415368.5_1_2:262747-263276:-|nuORF', 'ENST00000465733.5_1_2:260594-263276:-|nuORF'] 133819 20233 WLVKRLHKLC True NCI_RA007_Epitope_Rep1 1294.7696171726998 1294.76850993586 82.907 2 -2.412735913855154 0.4577536008175692 1.0 ['ENSG00000112379|ENST00000251691|ARFGEF3'] 117620 20610 VAHSHRQL True PC9_epitope_Rep5 946.5096970085799 946.50858993586 84.325 2 -2.412846333777665 0.4577536008175692 1.0 ['ENST00000492736.1_1_8:101965500-101965572:-|nuORF'] 65937 25936 LSLLHRILLYP True NCI_RA007_Epitope_Rep1 1336.8230922142 1336.82198993586 107.35 2 -2.412901695437028 0.4577536008175692 1.0 ['ENST00000356300.8_1_14:24047750-24047927:-|nuORF'] 55269 7085 LAQQVRVA True PC9_epitope_Rep2 883.5239500903899 883.52284993586 32.648 2 -2.413247511085741 0.4577536008175692 1.0 ['ENST00000584712.5_1_17:7476159-7478717:+|nuORF', 'ENST00000580461.5_1_17:7476163-7478717:+|nuORF'] 71497 23344 MKLWKKRW True PC9_epitope_Rep6 1174.6797395391397 1174.6786499358602 102.9 2 -2.4136710065610427 0.45778066384210864 1.0 ['ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5', 'PLEKHA5-AEBP2|4|fusion', 'PLEKHA5-AEBP2|2|fusion', 'PLEKHA5-AEBP2|3|fusion', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'PLEKHA5-AEBP2|10|fusion', 'PLEKHA5-AEBP2|8|fusion', 'PLEKHA5-AEBP2|9|fusion', 'PLEKHA5-AEBP2|7|fusion', 'PLEKHA5-AEBP2|6|fusion', 'PLEKHA5-AEBP2|5|fusion', 'PLEKHA5-AEBP2|12|fusion', 'PLEKHA5-AEBP2|11|fusion', 'PLEKHA5-AEBP2|1|fusion'] 4067 19500 AHRPGDHQ True NCI_RA007_Epitope_Rep3 916.42636130744 916.42526993586 85.083 2 -2.4138426745619004 0.4577970810845336 1.0 ['ENST00000352397.9_1_22:43027442-43032826:-|nuORF'] 92391 23067 RQRGSLAI True PC9_epitope_Rep3 899.5300980999898 899.52900993586 93.995 2 -2.414320041348517 0.4578028528848201 1.0 ['nc|ENSG00000197162|A8K8V0-2|ZNF785', 'ENSG00000197162|ENST00000395216|ZNF785'] 87934 16818 QVPQALHRV True H1975_Epitope_Rep3 1046.5985120129799 1046.59740993586 70.243 2 -2.414367334313392 0.4578086245622252 1.0 ['nc|ENSG00000215790|P0CK97|SLC35E2A'] 97705 5200 SHEDMLYPP True PC9_epitope_Rep1 1087.46444617859 1087.4633499358602 24.852 2 -2.4145349612210754 0.4578152942178319 1.0 ['ENSG00000258890|ENST00000556440|CEP95', 'nc|ENSG00000258890|Q96GE4-2|CEP95', 'ENST00000553956.6_1_17:62510355-62528036:+|nuORF'] 102547 18703 SQALEKLGRL True NCI_RA007_Epitope_Rep1 1113.65060715549 1113.6495099358601 76.891 2 -2.4146100614576147 0.4578152942178319 1.0 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000557212.5_1_15:91479504-91485975:+|nuORF', 'ENST00000486253.1_1_15:91479504-91483847:+|nuORF', 'ENST00000553671.6_1_15:91478554-91486156:+|nuORF'] 130078 25368 VTQLHKLAR True PC9_epitope_Rep3 1064.6454622054 1064.64487496793 103.0 1 -2.4148388124322167 0.4578152942178319 1.0 ['ENSG00000204839|ENST00000398882|MROH6', 'MROH6|p.H353Lfs*180|1|0.11|ENSG00000204839|chr8:143570026-143570051|GAGGCCTCGCAGGTGGTGGTCGGCAT/-|frameshift_variant'] 65725 20310 LSHSVVLRH True PC9_epitope_Rep6 1046.5985120129799 1046.59740993586 90.83 2 -2.41524501738622 0.45782106551705787 1.0 ['USB1|p.Q125H|1|0.06|ENSG00000103005|chr16:58010038-58010038|G/C|missense_variant'] 10453 24846 CMDTYVLG True H1975_Epitope_Rep1 900.3721260168799 900.37102993586 102.89 2 -2.4153025971726314 0.457822861339663 1.0 ['ENSG00000169484|ENST00000641793|OR4K14'] 53480 25371 KVLCYLKRVW True PC9_epitope_Rep5 1306.7583837826598 1306.7572899358602 102.81 2 -2.4156207709087236 0.457822861339663 1.0 ['ENST00000519610.1_1_5:150534867-150534930:-|nuORF'] 127259 17194 VQKQAITR True NCI_RA007_Epitope_Rep4 942.5610638750999 942.55996993586 74.451 2 -2.415625621661231 0.457822861339663 1.0 ['ENSG00000134504|ENST00000580059|KCTD1', 'KCTD1|p.T7Ifs*24|1|0.1|ENSG00000134504|chr18:26501203-26501216|TGCAGGGGATCTAG/-|frameshift_variant'] 127537 21576 VQVNGAAT True PC9_epitope_Rep5 758.3922672145 758.39116993586 88.033 2 -2.415692450690165 0.457822861339663 1.0 ['ENSG00000107929|ENST00000316157|LARP4B'] 91716 17661 RPHLEMEP True NCI_RA007_Epitope_Rep1 1007.48585032951 1007.48474993586 72.832 2 -2.4161970452291768 0.45782863225119746 1.0 ['ENSG00000198105|ENST00000395867|ZNF248'] 122774 23886 VGVGPLLY True NCI_RA007_Epitope_Rep5 816.4745402864799 816.47344993586 99.245 2 -2.41629133872054 0.4578344030398825 1.0 ['ENSG00000175463|ENST00000542590|TBC1D10C', 'ENST00000526474.1_1_11:67174309-67174885:+|nuORF', 'ENST00000529635.5_1_11:67174176-67177222:+|nuORF'] 63608 24175 LPLPWYLAKL True NCI_RA007_Epitope_Rep2 1212.7270665710398 1212.7259699358601 101.54 2 -2.416701776842329 0.45783530062903793 1.0 ['ENST00000367051.5_1_1:207812769-207813015:+|nuORF'] 6664 14809 AQAKVLAP True NCI_RA007_Epitope_Rep4 796.4806882960798 796.47958993586 64.424 2 -2.4170904406748845 0.45783530062903793 1.0 ['ENSG00000135631|ENST00000486777|RAB11FIP5', 'ENST00000493523.2_1_2:73302651-73316730:-|nuORF', 'nc|ENSG00000135631|Q9BXF6|RAB11FIP5'] 80005 17812 PKGAGQGH True H1975_Epitope_Rep2 750.3772858566999 750.37618993586 73.835 2 -2.417203620043776 0.4578410711624838 1.0 ['ENST00000356798.10_1_16:30515548-30516720:+|nuORF'] 73618 17760 NGGGGGGGP True PC9_epitope_Rep1 628.25650201768 628.25595496793 73.111 1 -2.4178218778775102 0.45784196858103793 1.0 ['nc|ENSG00000143376|Q96L92-3|SNX27', 'ENSG00000143376|ENST00000458013|SNX27'] 136241 23402 YGQEGKFSGP True NCI_RA007_Epitope_Rep5 1068.4876241513198 1068.48652993586 97.308 2 -2.4178649317953718 0.45784196858103793 1.0 ['ENSG00000079112|ENST00000027335|CDH17'] 58741 24670 LFLLKNPE True H1975_Epitope_Rep1 972.56441792004 972.56332993586 102.21 2 -2.418159913610703 0.45784337721211865 1.0 ['ENSG00000124212|ENST00000244043|PTGIS'] 84928 7611 QHVFEYLP True PC9_epitope_Rep6 1031.50763131991 1031.50652993586 38.561 2 -2.418173108173846 0.45784337721211865 1.0 ['nc|ENSG00000179869|Q86UQ4|ABCA13', 'ENSG00000179869|ENST00000435803|ABCA13', 'nc|ENSG00000179869|Q86UQ4-4|ABCA13', 'ABCA13|p.L3424Ffs*25|1|0.34|ENSG00000179869|chr7:48350707-48350708|-/T|frameshift_variant', 'nc|ENSG00000179869|Q86UQ4-3|ABCA13', 'nc|ENSG00000179869|Q86UQ4-6|ABCA13', 'nc|ENSG00000179869|Q86UQ4-7|ABCA13', 'nc|ENSG00000179869|Q86UQ4-5|ABCA13', 'ENST00000484268.1_1_7:48352666-48443694:+|nuORF'] 52382 23349 KPGKDIRN True PC9_epitope_Rep1 926.52976374682 926.52866993586 94.602 2 -2.4184631528538034 0.45784337721211865 1.0 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 121356 22193 VGHSAGHP True H1975_Epitope_Rep3 760.36163579256 760.36052993586 92.808 2 -2.41894632869496 0.45784337721211865 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 27217 22681 FLVAKHQARN True PC9_epitope_Rep2 1182.6621748986997 1182.66052490379 92.736 3 -2.4195022942279287 0.45784337721211865 1.0 ['TAAR9|p.K230N|1|0.45|ENSG00000237110|chr6:132538979-132538979|G/C|missense_variant'] 86382 17402 QQLLHTQLL True H1975_Epitope_Rep3 1092.62914343492 1092.62857496793 72.615 1 -2.420138355636544 0.45784337721211865 1.0 ['ENST00000609439.2_2_7:45847154-45848297:+|nuORF'] 49222 21903 KGRCLGSP True NCI_RA007_Epitope_Rep5 816.4276071773999 816.4265099358599 91.38 2 -2.420439527333325 0.45784337721211865 1.0 ['ENST00000369153.2_1_1:149871204-149871542:+|nuORF'] 6111 10895 APNKGGGG True NCI_RA007_Epitope_Rep4 656.3241876546799 656.32363496793 48.763 1 -2.4205497009565855 0.45784337721211865 1.0 ['ENSG00000116017|ENST00000263620|ARID3A'] 123480 11564 VIGGNKAL True H1975_Epitope_Rep2 770.46503823194 770.46394993586 49.545 2 -2.421500898067171 0.45784337721211865 1.0 ['ENST00000493965.5_1_9:39078319-39086841:-|nuORF'] 37770 23610 HAWKGYRK True NCI_RA007_Epitope_Rep3 1044.5617325814399 1044.56062993586 102.4 2 -2.4217068236322326 0.45784337721211865 1.0 ['ENSG00000177239|ENST00000371589|MAN1B1'] 68758 18064 LVDMAKKL True NCI_RA007_Epitope_Rep5 916.54157430048 916.54046993586 76.28 2 -2.421766661657348 0.45784337721211865 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 40717 23661 HTSCSSGC True H1975_Epitope_Rep1 780.2530735133599 780.25196993586 98.249 2 -2.4218799676472056 0.45784337721211865 1.0 ['ENSG00000187175|ENST00000391617|KRTAP12-1', 'ENSG00000221864|ENST00000360770|KRTAP12-2'] 112886 19533 TPPPGLGF True H1975_Epitope_Rep1 784.41194002992 784.41084993586 81.335 2 -2.4222747479410036 0.45784337721211865 1.0 ['ENSG00000109686|ENST00000604030|SH3D19'] 88498 15149 RAAKTVAH True NCI_RA007_Epitope_Rep3 852.49298431528 852.49188993586 67.103 2 -2.422412124142249 0.45784337721211865 1.0 ['nc|ENSG00000121753|O60241-4|ADGRB2', 'nc|ENSG00000121753|O60241-3|ADGRB2', 'nc|ENSG00000121753|O60241-2|ADGRB2', 'ENSG00000121753|ENST00000373658|ADGRB2', 'ENST00000530999.1_1_1:32193023-32200902:-|nuORF', 'ENST00000465256.5_1_1:32193589-32201220:-|nuORF'] 79153 19515 PGASSWPP True H1975_Epitope_Rep2 797.37080349393 797.36970993586 80.983 2 -2.4225538731945315 0.45784337721211865 1.0 ['ENST00000534127.5_1_11:8752243-8752675:-|nuORF'] 81824 21551 PSGHTTGH True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 89.159 2 -2.422952047568118 0.45784914655429276 1.0 ['ENSG00000147206|ENST00000395065|NXF3', 'NXF3|p.S358Wfs*8|1|0.5|ENSG00000147206|chrX:103079849-103079850|AG/-|frameshift_variant'] 42929 11607 IFYFRIFIFIF True H1975_Epitope_Rep3 1524.8533297133197 1524.8522299358601 49.778 2 -2.4232357924582586 0.4578673505219362 1.0 ['nc|nan|O96002|CXorf1'] 86771 23350 QRMCLYVG True NCI_RA007_Epitope_Rep3 968.4571930535197 968.45608993586 101.4 2 -2.4237949812582906 0.4578673505219362 1.0 ['ENST00000429989.7_1_10:82277765-82278146:+|nuORF'] 112887 19634 TPPPGLGF True H1975_Epitope_Rep1 784.41194002992 784.41084993586 81.734 2 -2.423810652476062 0.4578673505219362 1.0 ['ENSG00000109686|ENST00000604030|SH3D19'] 38233 9539 HEWAGGGG True PC9_epitope_Rep5 769.3143512469697 769.3138049679301 41.651 1 -2.4246242507770956 0.4578673505219362 1.0 ['ENSG00000171094|ENST00000389048|ALK'] 80944 14376 PMSEKGKI True NCI_RA007_Epitope_Rep4 888.4738886634799 888.47278993586 62.605 2 -2.424642023116687 0.4578673505219362 1.0 ['ENST00000560334.5_1_15:79271198-79356973:-|nuORF', 'ENSG00000058335|ENST00000558480|RASGRF1', 'nc|ENSG00000058335|Q13972|RASGRF1'] 87985 19612 QVRGPLHLR True NCI_RA007_Epitope_Rep5 1074.6410455312998 1074.6399499358602 82.341 2 -2.425413354359676 0.45791568239375174 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 24550 26383 FALLSDHS True H1975_Epitope_Rep3 888.43413202648 888.43302993586 110.07 2 -2.426235896460113 0.45792145053682204 1.0 ['MLT1D_dup15897|chr14:30412101-30412608:-|1.011600261695961|0.0585867893101161|4.11|434.0|30|2|anti-sense'] 126188 13855 VPGHPPGG True NCI_RA007_Epitope_Rep3 716.3605731634 716.36002496793 61.827 1 -2.4267784195443274 0.4579223460061076 1.0 ['nc|ENSG00000186174|Q86UU0-4|BCL9L', 'nc|ENSG00000186174|Q86UU0-2|BCL9L', 'ENSG00000186174|ENST00000683865|BCL9L', 'nc|ENSG00000186174|Q86UU0-3|BCL9L'] 117515 6300 VAFAIPAA True NCI_RA007_Epitope_Rep5 758.4326754744999 758.43156993586 30.911 2 -2.4273274051662965 0.4579223460061076 1.0 ['ENST00000501520.1_1_16:28303160-28303361:-|nuORF'] 64793 23677 LRVKHLMLLHY True PC9_epitope_Rep5 1421.83294570525 1421.83129490379 96.052 3 -2.4284159728676613 0.4579600349003001 1.0 ['ENSG00000196329|ENST00000358647|GIMAP5', 'nc|ENSG00000196329|Q96F15-2|GIMAP5'] 14134 10107 DSFYSEVAEL True PC9_epitope_Rep4 1158.5080848123798 1158.50698993586 46.548 2 -2.4286151525798094 0.4579609295199183 1.0 ['ENSG00000038382|ENST00000344204|TRIO', 'nc|ENSG00000038382|O75962-2|TRIO', 'nc|ENSG00000038382|O75962-4|TRIO', 'nc|ENSG00000038382|O75962-3|TRIO', 'ENST00000508717.1_1_5:14498631-14508016:+|nuORF'] 117521 20286 VAFFILLM True NCI_RA007_Epitope_Rep2 952.5455970517598 952.54448993586 83.939 2 -2.4292740119815526 0.4579609295199183 1.0 ['PCDHB6|p.H495Afs*179|1|0.13|ENSG00000113211|chr5:141151738-141151739|-/G|frameshift_variant', 'ENSG00000113211|ENST00000231136|PCDHB6'] 219 16672 AAFSGHNA True NCI_RA007_Epitope_Rep5 773.34565137525 773.3451049679301 70.896 1 -2.429821864781794 0.4579879768048093 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2', 'nc|ENSG00000148204|Q5IJ48-3|CRB2'] 103247 22743 SQSSVKKA True PC9_epitope_Rep5 833.4606811274899 833.45958993586 92.486 2 -2.4304509313684233 0.45800438363160473 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 78801 22890 PEMAGKPQ True NCI_RA007_Epitope_Rep5 856.41128840692 856.41018993586 95.267 2 -2.4310694022616994 0.4580265565816913 1.0 ['CD247|p.G97A|1|0.15|ENSG00000198821|chr1:167438580-167438580|C/G|missense_variant'] 82053 17607 PSVPAPGH True NCI_RA007_Epitope_Rep3 760.3867879112399 760.38568993586 77.213 2 -2.4314506241217306 0.4580265565816913 1.0 ['ENST00000580011.1_1_17:62082347-62097946:-|nuORF'] 112543 21757 TPAHHPPG True H1975_Epitope_Rep2 812.3929359208399 812.39182993586 89.997 2 -2.431491050745411 0.4580323229314069 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 51882 20279 KKRFWIIE True NCI_RA007_Epitope_Rep5 1118.6600496403796 1118.6589499358602 84.943 2 -2.431940886341239 0.45804872858814766 1.0 ['ENSG00000130940|ENST00000377022|CASZ1'] 84709 18194 QHFEEQSVP True PC9_epitope_Rep4 1099.4934378077498 1099.4923499358601 78.05 2 -2.4327225850357452 0.45806026044769765 1.0 ['nc|ENSG00000140563|Q6DN12-2|MCTP2', 'ENSG00000140563|ENST00000357742|MCTP2'] 60870 19661 LKPKVRKERD True NCI_RA007_Epitope_Rep5 1267.77245362367 1267.7713499358601 82.539 2 -2.432778454088017 0.45806026044769765 1.0 ['ENSG00000155754|ENST00000439140|C2CD6'] 121374 23480 VGHSAGHP True NCI_RA007_Epitope_Rep4 760.36163579256 760.36052993586 101.89 2 -2.433565044562731 0.4580766652835849 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 78506 12733 PDHGSSTI True NCI_RA007_Epitope_Rep5 812.3664463894801 812.36534993586 55.643 2 -2.433932266524811 0.45807755731687855 1.0 ['nc|ENSG00000182621|Q9NQ66-2|PLCB1', 'ENSG00000182621|ENST00000338037|PLCB1'] 81592 21346 PRLPRSTT True PC9_epitope_Rep6 926.5297637468201 926.52866993586 94.981 2 -2.4341860987071096 0.45807755731687855 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 72860 24168 NAPHSQGE True PC9_epitope_Rep2 838.35694433494 838.35584993586 98.489 2 -2.435801801764246 0.458104600195753 1.0 ['nc|ENSG00000074211|Q9Y2T4-3|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-4|PPP2R2C', 'nc|ENSG00000074211|Q9Y2T4-2|PPP2R2C', 'ENSG00000074211|ENST00000382599|PPP2R2C'] 71177 21147 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 88.364 2 -2.43616496594704 0.45811036522442206 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 120637 10207 VGAKGGGH True H1975_Epitope_Rep1 681.35582213613 681.3552749679301 44.202 1 -2.4372692366404896 0.4581325333248226 1.0 ['nc|ENSG00000187642|Q5SV97-3|PERM1', 'ENSG00000187642|ENST00000433179|PERM1'] 37499 24549 GYFWNRQH True H1975_Epitope_Rep1 1106.5046116281399 1106.5035099358602 101.73 2 -2.437437910806504 0.4581325333248226 1.0 ['ENSG00000213199|ENST00000349064|ASIC3', 'nc|ENSG00000213199|Q9UHC3-2|ASIC3', 'nc|ENSG00000213199|Q9UHC3-3|ASIC3'] 133650 24779 WKNFKEHH True PC9_epitope_Rep2 1124.55156182056 1124.55046993586 100.99 2 -2.4380101976237945 0.4581440622972096 1.0 ['ENSG00000100867|ENST00000250383|DHRS2'] 81259 20988 PPPLQKKW True H1975_Epitope_Rep1 992.5807366905199 992.57962993586 87.177 2 -2.438382161673626 0.4581440622972096 1.0 ['ENST00000261401.7_1_12:109041104-109041182:-|nuORF'] 122159 17415 VGRKKGPN True NCI_RA007_Epitope_Rep2 854.5086343794198 854.50752993586 72.482 2 -2.4390720587273593 0.45814982659943404 1.0 ['ENST00000297785.7_1_9:75524650-75527037:-|nuORF'] 512 13910 AAPLGRHP True PC9_epitope_Rep4 817.4558705305701 817.45476993586 61.408 2 -2.4392715758518437 0.4581555907790177 1.0 ['ENST00000373045.10_1_1:38259693-38260377:+|nuORF'] 124251 22728 VLCTRKRR True NCI_RA007_Epitope_Rep5 1030.6182019117398 1030.61710993586 94.618 2 -2.4399174130666608 0.4581786462710224 1.0 ['MED15|p.V659L|1|0.46|ENSG00000099917|chr22:20585111-20585111|G/C|missense_variant'] 123464 24598 VIFPDVSH True NCI_RA007_Epitope_Rep1 912.4705175352001 912.46942993586 101.88 2 -2.440142075636622 0.4581786462710224 1.0 ['ENST00000381482.7_1_20:2125208-2125481:+|nuORF'] 4467 7042 AKFMFVVG True PC9_epitope_Rep3 897.4782457679298 897.47714993586 32.097 2 -2.4402957560576963 0.4581786462710224 1.0 ['SLC18B1|p.A105V|1|0.25|ENSG00000146409|chr6:132789803-132789803|G/A|missense_variant'] 72881 18159 NATKTKLKQ True NCI_RA007_Epitope_Rep4 1030.61349337078 1030.6123899358602 78.582 2 -2.440314344873745 0.4581786462710224 1.0 ['ENSG00000163104|ENST00000354268|SMARCAD1', 'nc|ENSG00000163104|Q9H4L7-2|SMARCAD1', 'SMARCAD1|p.N347Kfs*4|1|0.46|ENSG00000163104|chr4:94252758-94252759|-/A|frameshift_variant'] 64639 13149 LRGGAFLC True NCI_RA007_Epitope_Rep5 835.43744358511 835.43634993586 57.255 2 -2.4410655156606516 0.45819504723002297 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|309|2|anti-sense'] 14770 7450 DWENTDWF True H1975_Epitope_Rep2 1111.42468954159 1111.42417496793 33.601 1 -2.4418988754455504 0.45822208511950985 1.0 ['nc|ENSG00000140391|O60637-3|TSPAN3', 'nc|ENSG00000140391|O60637-2|TSPAN3', 'ENSG00000140391|ENST00000267970|TSPAN3'] 127588 20513 VQYLLCWL True H1975_Epitope_Rep3 1036.5415743004799 1036.54046993586 85.746 2 -2.4424765015586494 0.45823848526752475 1.0 ['ENST00000261868.9_1_15:44853434-44853497:+|nuORF'] 49548 24999 KKGVLDWLFQK True PC9_epitope_Rep5 1360.7867067054797 1360.78560993586 101.32 2 -2.4432570200738937 0.45826021292662433 1.0 ['IBTK|p.I72F|1|0.17|ENSG00000005700|chr6:82240273-82240273|T/A|missense_variant'] 81080 24670 PPFLDHSP True PC9_epitope_Rep3 908.4392174069201 908.43812993586 100.26 2 -2.4436575272337047 0.45826021292662433 1.0 ['ENST00000560131.1_1_15:63356108-63358095:+|nuORF'] 134441 1263 WTHGAQGG True PC9_epitope_Rep2 812.3565504121198 812.35544993586 7.113 2 -2.4438231171965676 0.45826021292662433 1.0 ['ENST00000198536.6_2_7:99971963-99987546:+|nuORF'] 81823 20144 PSGHTTGH True H1975_Epitope_Rep2 792.3514650316799 792.35036993586 83.476 2 -2.444092304663862 0.45826021292662433 1.0 ['ENSG00000147206|ENST00000395065|NXF3', 'NXF3|p.S358Wfs*8|1|0.5|ENSG00000147206|chrX:103079849-103079850|AG/-|frameshift_variant'] 42735 6154 IFDMKKWDQFY True PC9_epitope_Rep5 1519.71697246315 1519.7153249037901 28.656 3 -2.4443830061723446 0.45826021292662433 1.0 ['ENSG00000171234|ENST00000305231|UGT2B7', 'UGT2B10|p.N227D|2|0.16|ENSG00000109181|chr4:68816698-68816698|A/G|missense_variant', 'nc|ENSG00000156096|P06133-3|UGT2B4', 'nc|ENSG00000156096|P06133-2|UGT2B4', 'ENSG00000156096|ENST00000305107|UGT2B4'] 26160 8444 FHPGGGSP True H1975_Epitope_Rep2 754.33983771882 754.3392849679301 37.43 1 -2.4445708884695585 0.45826021292662433 1.0 ['nc|ENSG00000175879|P13378-2|HOXD8', 'ENSG00000175879|ENST00000313173|HOXD8'] 134159 19005 WRIWSLFLS True NCI_RA007_Epitope_Rep5 1206.65496425994 1206.65386993586 79.96 2 -2.444719256880785 0.45826021292662433 1.0 ['ENST00000396253.7_1_11:18327777-18327885:-|nuORF'] 140220 21776 YWLANYVW True PC9_epitope_Rep6 1113.52836676449 1113.5272699358602 96.653 2 -2.445581282846663 0.45826021292662433 1.0 ['nc|ENSG00000107331|Q9BZC7|ABCA2', 'ENSG00000107331|ENST00000341511|ABCA2', 'nc|ENSG00000107331|Q9BZC7-4|ABCA2', 'ENST00000459850.5_1_9:139905575-139923366:-|nuORF', 'nc|ENSG00000107331|Q9BZC7-2|ABCA2', 'ENST00000487109.5_1_9:139906084-139911410:-|nuORF'] 127799 27386 VRKSLGRG True PC9_epitope_Rep5 871.5351834804299 871.53408993586 112.28 2 -2.446280790442689 0.45826021292662433 1.0 ['nc|ENSG00000156983|P55201-3|BRPF1', 'nc|ENSG00000156983|P55201|BRPF1', 'ENSG00000156983|ENST00000383829|BRPF1', 'nc|ENSG00000156983|P55201-4|BRPF1'] 124215 23218 VLAQIRRLQQ True PC9_epitope_Rep3 1223.74623887583 1223.7445949037901 94.582 3 -2.446927877848529 0.45826021292662433 1.0 ['TMEM151A|p.L138Q|1|0.25|ENSG00000179292|chr11:66294659-66294659|T/A|missense_variant'] 49282 21973 KHIPLCAL True PC9_epitope_Rep2 893.5156939058099 893.51458993586 89.996 2 -2.447021219622216 0.45826021292662433 1.0 ['nc|ENSG00000153246|Q13018-2|PLA2R1', 'ENSG00000153246|ENST00000283243|PLA2R1'] 49208 21773 KGPSFCSS True PC9_epitope_Rep1 811.35343917763 811.35234993586 88.581 2 -2.44757955172918 0.45826021292662433 1.0 ['ENSG00000203786|ENST00000606109|KPRP'] 133666 19549 WKTLKMLNFRL True NCI_RA007_Epitope_Rep3 1448.8326113520798 1448.8315099358601 85.275 2 -2.447838066944779 0.45826021292662433 1.0 ['ENST00000394961.6_1_4:95155160-95155232:+|nuORF'] 124229 24877 VLATTVKKL True NCI_RA007_Epitope_Rep5 971.6379172134699 971.63682993586 103.18 2 -2.448371177276151 0.45827661022717603 1.0 ['ENSG00000123104|ENST00000381340|ITPR2'] 26995 13078 FLLEKLRS True NCI_RA007_Epitope_Rep3 1004.60186605792 1004.60076993586 58.723 2 -2.4491258932656965 0.45830364264823187 1.0 ['ENST00000564098.5_1_16:1795776-1795875:+|nuORF'] 122646 19046 VGTPGGGG True H1975_Epitope_Rep1 600.2867395168 600.2861949679301 79.394 1 -2.4493847968490163 0.45832092568171184 1.0 ['nc|ENSG00000204469|P48634-2|PRRC2A', 'nc|ENSG00000204469|P48634-3|PRRC2A', 'ENSG00000204469|ENST00000376033|PRRC2A'] 140779 16313 YYRQGCAS True NCI_RA007_Epitope_Rep4 946.3967009719398 946.39560993586 70.746 2 -2.449403860579428 0.45832092568171184 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 39773 6399 HQDFWGAPV True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 29.638 2 -2.4495254179962616 0.45832092568171184 1.0 ['ENST00000392842.5_1_12:106976790-107075774:+|nuORF'] 9715 19403 AYIPSHSD True H1975_Epitope_Rep3 888.39774651776 888.39664993586 81.319 2 -2.4496954062553873 0.4583218121875997 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 140778 15404 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 68.147 2 -2.449708085375113 0.4583218121875997 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 127681 24525 VRGENVVL True H1975_Epitope_Rep3 884.5079656730799 884.50686993586 102.07 2 -2.4501558327585276 0.45835460268844647 1.0 ['ENST00000523511.1_1_8:38021190-38029494:-|nuORF', 'ENSG00000175324|ENST00000311351|LSM1'] 63376 24888 LPFLAAFY True PC9_epitope_Rep3 940.5058404147599 940.50474993586 101.11 2 -2.450378603117654 0.45835460268844647 1.0 ['ENSG00000120436|ENST00000366834|GPR31'] 10129 9689 CAGRSAAH True H1975_Epitope_Rep2 771.3446058294301 771.3440549679301 42.25 1 -2.4506373682627984 0.45837099741580084 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|311|2|anti-sense'] 123921 18144 VKKAVPKEDI True NCI_RA007_Epitope_Rep5 1125.6757592741699 1125.67411490379 76.596 3 -2.4513428936046298 0.4583931514861488 1.0 ['ENSG00000177733|ENST00000314940|HNRNPA0'] 67977 26729 LTLQPGFW True H1975_Epitope_Rep1 960.5069030439199 960.50580993586 111.3 2 -2.4514706567568707 0.4583931514861488 1.0 ['ENST00000591875.1_1_16:5110243-5115909:-|nuORF', 'ENSG00000153446|ENST00000472572|C16orf89', 'nc|nan|Q6UX73|C16orf89'] 70562 19328 LYWKWLWAKW True PC9_epitope_Rep4 1478.78631278266 1478.7852099358602 82.452 2 -2.4519335864397704 0.45841219880478934 1.0 ['ENST00000377833.8_1_10:17147498-17151673:-|nuORF'] 90970 24314 RLHTGVKRY True NCI_RA007_Epitope_Rep3 1128.651610215 1128.65050993586 105.23 2 -2.4520241032355603 0.45841219880478934 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611'] 11287 15340 DESKQLYK True H1975_Epitope_Rep1 1009.50802524273 1009.5074749679301 64.274 1 -2.452200114875637 0.45841219880478934 1.0 ['nc|ENSG00000157870|Q8TBF2-4|PRXL2B', 'ENST00000484099.5_1_1:2518532-2520863:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-6|PRXL2B', 'ENSG00000157870|ENST00000419916|PRXL2B', 'ENST00000493183.5_1_1:2517940-2520863:+|nuORF', 'ENST00000477045.1_1_1:2518532-2519982:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-2|PRXL2B', 'ENST00000481683.5_1_1:2518487-2520915:+|nuORF', 'nc|ENSG00000157870|Q8TBF2-3|PRXL2B', 'nc|ENSG00000157870|Q8TBF2-7|PRXL2B'] 130575 20521 VTYVPGGK True PC9_epitope_Rep5 819.4490538146298 819.44850496793 83.977 1 -2.4528633376508617 0.45841219880478934 1.0 ['ENSG00000138722|ENST00000264790|MMRN1', 'nc|ENSG00000138722|Q13201-2|MMRN1'] 68751 16600 LVDMAKKL True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 73.079 2 -2.4534508211169057 0.45841219880478934 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 32538 23497 GGSKGLVR True NCI_RA007_Epitope_Rep3 772.4555361774 772.45442993586 101.96 2 -2.4535495249301142 0.45841219880478934 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'nc|ENSG00000149527|O75038-5|PLCH2'] 71867 24910 MPMELPIF True H1975_Epitope_Rep2 976.4761971625999 976.47508993586 102.39 2 -2.454010196009985 0.45841219880478934 1.0 ['ENSG00000140836|ENST00000268489|ZFHX3', 'nc|ENSG00000140836|Q15911-2|ZFHX3'] 121391 23814 VGHSAGHP True PC9_epitope_Rep4 760.36163579256 760.36052993586 100.02 2 -2.4544882715628185 0.45842859117637674 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 52982 16620 KRQGPKEP True NCI_RA007_Epitope_Rep4 938.5297637468199 938.52866993586 72.049 2 -2.4547936919893583 0.4584343498787801 1.0 ['nc|ENSG00000163346|Q96AQ6-3|PBXIP1', 'nc|ENSG00000163346|Q96AQ6-2|PBXIP1', 'ENSG00000163346|ENST00000368463|PBXIP1'] 93347 24947 RRTRRLHILP True PC9_epitope_Rep3 1316.8265548851998 1316.8254499358602 101.31 2 -2.455910093261884 0.45844586691618994 1.0 ['ENST00000489156.1_1_6:152623240-152623372:-|nuORF'] 39546 21961 HPGAPETH True PC9_epitope_Rep6 844.3827651599602 844.38166993586 97.393 2 -2.4564665113542774 0.45844586691618994 1.0 ['ENST00000520753.5_1_19:48752875-48753037:-|nuORF', 'ENST00000518596.5_1_19:48744293-48753037:-|nuORF'] 79433 9592 PGPHGPNG True PC9_epitope_Rep1 731.33508669155 731.33453496793 41.752 1 -2.456752178961905 0.45848352419534916 1.0 ['ENSG00000204262|ENST00000374866|COL5A2'] 130843 15985 VVGAERKQ True H1975_Epitope_Rep2 885.50321464581 885.50210993586 66.685 2 -2.457064204205134 0.45850567257493435 1.0 ['ENST00000394111.6_1_2:73143891-73161080:+|nuORF'] 88585 16843 RALHSSLSRP True PC9_epitope_Rep3 1122.6257893899801 1122.62413490379 69.94 3 -2.457078874424206 0.45850567257493435 1.0 ['ENST00000376395.8_2_9:86322580-86322796:-|nuORF'] 52219 24710 KMVKKAKT True PC9_epitope_Rep2 932.5841078187999 932.58355496793 100.73 1 -2.45759306943665 0.45852206273258905 1.0 ['ENSG00000107937|ENST00000360803|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-2|GTPBP4', 'nc|ENSG00000107937|Q9BZE4-3|GTPBP4'] 4151 7007 AHWAAAGG True NCI_RA007_Epitope_Rep5 739.3401720719899 739.33962496793 33.631 1 -2.458317702994678 0.4585295837541864 1.0 ['ENSG00000235098|ENST00000537107|ANKRD65'] 93943 25125 RVLLNVIH True PC9_epitope_Rep1 962.6025347642601 962.60142993586 101.53 2 -2.4583474402803396 0.4585295837541864 1.0 ['ENSG00000085511|ENST00000392142|MAP3K4', 'nc|ENSG00000085511|Q9Y6R4-2|MAP3K4'] 91443 19145 RNNISLVK True NCI_RA007_Epitope_Rep5 942.5610638751 942.55996993586 80.512 2 -2.458640868528452 0.4585295837541864 1.0 ['nc|ENSG00000135048|Q9UHN6-2|CEMIP2', 'ENSG00000135048|ENST00000377044|CEMIP2'] 85175 26433 QKDHFKSQ True NCI_RA007_Epitope_Rep5 1016.5039429218 1016.50284993586 109.28 2 -2.459238809687966 0.4585295837541864 1.0 ['ENSG00000255009|ENST00000530464|UBTFL1'] 121389 24064 VGHSAGHP True PC9_epitope_Rep3 760.36163579256 760.36052993586 97.847 2 -2.4592593350058745 0.4585295837541864 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 53422 23642 KVGPGNHG True PC9_epitope_Rep6 764.39293592084 764.39182993586 104.09 2 -2.459392495696858 0.4585304655687509 1.0 ['ENSG00000008952|ENST00000337002|SEC62'] 64770 19325 LRRYSVDLR True NCI_RA007_Epitope_Rep4 1176.6727395823998 1176.6716499358602 83.574 2 -2.4594083814323304 0.4585304655687509 1.0 ['nc|ENSG00000138030|P50053-2|KHK'] 29849 21397 FVVLIVPM True PC9_epitope_Rep6 916.54559705176 916.54448993586 95.176 2 -2.459965408836767 0.4585362223309022 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 62093 22247 LLNIMTTT True PC9_epitope_Rep6 905.4892043744502 905.48810993586 98.53 2 -2.4604141819243828 0.4585371039761854 1.0 ['nc|ENSG00000156920|Q8IZF6-2|ADGRG4', 'nc|ENSG00000156920|Q8IZF6-3|ADGRG4', 'ENSG00000156920|ENST00000394143|ADGRG4'] 125096 25687 VLPGKKKKKT True PC9_epitope_Rep3 1125.75976368165 1125.75811490379 104.34 3 -2.460436624266333 0.4585371039761854 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 78821 22429 PEPLLVGL True PC9_epitope_Rep4 836.5007550343199 836.49964993586 94.504 2 -2.460794030327944 0.45856500430562497 1.0 ['ENSG00000164307|ENST00000443439|ERAP1', 'nc|ENSG00000164307|Q9NZ08-2|ERAP1', 'ERAP1|p.N856Kfs*10|1|0.12|ENSG00000164307|chr5:96781078-96781079|-/T|frameshift_variant', 'ENST00000503921.5_1_5:96133011-96143586:-|nuORF'] 133606 23684 WIPFIYRGVRV True PC9_epitope_Rep2 1404.80302547596 1404.80137490379 96.573 3 -2.4608819236161104 0.45856500430562497 1.0 ['ENSG00000104356|ENST00000401707|POP1'] 128170 15891 VRSKQLNP True NCI_RA007_Epitope_Rep3 940.54541381096 940.54430993586 70.163 2 -2.461108781728569 0.45856500430562497 1.0 ['nc|ENSG00000128591|Q14315-2|FLNC', 'ENSG00000128591|ENST00000325888|FLNC', 'FLNC|p.I1387Hfs*18|1|0.1|ENSG00000128591|chr7:128846773-128846774|-/C|frameshift_variant', 'FLNC|p.G898Afs*24|1|0.23|ENSG00000128591|chr7:128843458-128843458|G/-|frameshift_variant'] 121117 6114 VGGEEFYFV True PC9_epitope_Rep5 1045.4756624852898 1045.47456993586 28.503 2 -2.461404352911 0.45857076033339006 1.0 ['ENSG00000205038|ENST00000378402|PKHD1L1', 'PKHD1L1|p.G3595Efs*3|1|0.42|ENSG00000205038|chr8:109498726-109498726|G/-|frameshift_variant', 'PKHD1L1|p.S3970Mfs*9|1|0.26|ENSG00000205038|chr8:109518386-109518386|G/-|frameshift_variant', 'PKHD1L1|p.N2355Tfs*2|1|0.39|ENSG00000205038|chr8:109459652-109459652|A/-|frameshift_variant', 'PKHD1L1|p.V3282Lfs*8|1|0.21|ENSG00000205038|chr8:109486784-109486784|G/-|frameshift_variant', 'PKHD1L1|p.T1976Hfs*9|1|0.32|ENSG00000205038|chr8:109448285-109448286|-/G|frameshift_variant', 'PKHD1L1|p.G2014Vfs*4|1|0.38|ENSG00000205038|chr8:109449349-109449349|G/-|frameshift_variant'] 99062 6254 SKVWNDLR True PC9_epitope_Rep2 1016.5403284305199 1016.53922993586 29.453 2 -2.461835526610939 0.45858714718545684 1.0 ['ENST00000480807.1_1_7:2294693-2297236:-|nuORF', 'ENSG00000106266|ENST00000222990|SNX8'] 71433 26253 MIREADVD True H1975_Epitope_Rep1 947.4382314307499 947.4376849679301 109.06 1 -2.4630588637153426 0.45859865840305314 1.0 ['ENSG00000178372|ENST00000380332|CALML5'] 38230 9576 HEWAGGGG True PC9_epitope_Rep1 769.3143512469697 769.3138049679301 41.691 1 -2.463172026874865 0.45859865840305314 1.0 ['ENSG00000171094|ENST00000389048|ALK'] 53238 17577 KTERNVKL True NCI_RA007_Epitope_Rep4 986.5872786229398 986.58618993586 76.057 2 -2.463621511444307 0.45863630565123104 1.0 ['nc|ENSG00000229089|Q5CZ79-2|ANKRD20A8P', 'nc|ENSG00000229089|Q5CZ79|ANKRD20A8P', 'ENST00000432432.6_1_2:95480778-95522914:-|nuORF'] 140776 15229 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 67.427 2 -2.464222427960723 0.45863718507494416 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 81700 20780 PRVQRQVTSLL True NCI_RA007_Epitope_Rep4 1295.7673682432298 1295.76571490379 90.027 3 -2.464736137476747 0.45863718507494416 1.0 ['ENSG00000005810|ENST00000544440|MYCBP2', 'nc|ENSG00000005810|O75592-2|MYCBP2'] 121241 16387 VGGRDLVYSL True PC9_epitope_Rep6 1077.5818588893299 1077.5807699358602 75.419 2 -2.465192172900591 0.4586380644612637 1.0 ['SEMA3E|p.S82I|2|0.34|ENSG00000170381|chr7:83490145-83490145|C/A|missense_variant', 'nc|ENSG00000170381|O15041-2|SEMA3E', 'ENSG00000170381|ENST00000643230|SEMA3E'] 791 24351 ACDANRSGR True H1975_Epitope_Rep3 948.41956167484 948.41846993586 101.4 2 -2.465375284270607 0.4586380644612637 1.0 ['ENSG00000165105|ENST00000376447|RASEF', 'nc|ENSG00000165105|Q8IZ41-2|RASEF'] 42747 11230 IFEELSGAE True PC9_epitope_Rep5 993.4654917244098 993.46438993586 48.186 2 -2.465425725973183 0.4586438191617148 1.0 ['ENSG00000175215|ENST00000398073|CTDSP2'] 76024 19664 NRKEHKLKK True NCI_RA007_Epitope_Rep2 1179.72002412799 1179.71947496793 81.438 1 -2.465707517191673 0.45864957373982185 1.0 ['nc|ENSG00000050438|Q2Y0W8-4|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-5|SLC4A8', 'nc|ENSG00000050438|Q2Y0W8-3|SLC4A8', 'ENST00000319957.10_1_12:51818771-51890959:+|nuORF', 'nc|ENSG00000050438|Q2Y0W8-2|SLC4A8', 'ENSG00000050438|ENST00000453097|SLC4A8', 'DAPP1-SLC4A4|1|fusion', 'DAPP1-SLC4A4|2|fusion', 'ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'SLC4A7|p.G1175Efs*11|1|0.32|ENSG00000033867|chr3:27383192-27383192|C/-|frameshift_variant', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7', 'nc|ENSG00000144290|Q6U841-2|SLC4A10', 'nc|ENSG00000144290|Q6U841-3|SLC4A10', 'ENSG00000144290|ENST00000446997|SLC4A10', 'ENST00000446228.5_1_2:162758621-162834241:+|nuORF', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'SLC4A4|p.K1022Rfs*37|1|0.14|ENSG00000080493|chr4:71560215-71560215|G/-|frameshift_variant', 'ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4'] 32820 13618 GIGGFCHH True H1975_Epitope_Rep3 826.3544422371401 826.35389496793 57.669 1 -2.4665275092721344 0.45868721764549564 1.0 ['ENST00000515834.1_1_5:180657548-180660003:+|nuORF'] 29842 15362 FVVLIVPM True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 66.759 2 -2.468243678188355 0.45868809592142606 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 19437 21735 ELPPSLKIY True PC9_epitope_Rep6 1058.60119735158 1058.60010993586 96.495 2 -2.4686278195084737 0.45868809592142606 1.0 ['ENSG00000118492|ENST00000397944|ADGB'] 3418 17316 AGKSSSKKKK True NCI_RA007_Epitope_Rep3 1047.64004247179 1047.63947496793 75.993 1 -2.46995426224685 0.45872086225406306 1.0 ['ENST00000440030.1_1_6:28751412-28751496:-|nuORF'] 10446 23444 CLVVVPVS True PC9_epitope_Rep2 814.4622613506199 814.46116993586 95.649 2 -2.4703270328237847 0.45872086225406306 1.0 ['nc|ENSG00000101452|Q9H5Z1-2|DHX35', 'ENSG00000101452|ENST00000252011|DHX35'] 82299 23958 PTPPSGTE True PC9_epitope_Rep3 784.3602983798801 784.35920993586 97.44 2 -2.4704324170286136 0.4587266156462585 1.0 ['ENSG00000113758|ENST00000393565|DBN1', 'ENST00000472831.5_1_5:176884436-176895158:-|nuORF', 'nc|ENSG00000113758|Q16643|DBN1', 'nc|ENSG00000113758|Q16643-2|DBN1'] 29826 19568 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 81.197 2 -2.4725472284290935 0.458770885591599 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 52101 14522 KLPAAVSLY True NCI_RA007_Epitope_Rep2 960.5644179200401 960.56332993586 61.151 2 -2.4729258066791693 0.458770885591599 1.0 ['PCLO|p.T1888A|2|0.23|ENSG00000186472|chr7:82955291-82955291|T/C|missense_variant'] 7266 20168 ARPLRLVLIWC True NCI_RA007_Epitope_Rep5 1338.79583192054 1338.79472993586 84.522 2 -2.4732408823220284 0.458770885591599 1.0 ['ENST00000397261.7_1_3:9834275-9834479:+|nuORF'] 35063 11136 GRGGPDGHP True NCI_RA007_Epitope_Rep5 848.38891316956 848.38780993586 49.47 2 -2.473309191022586 0.458770885591599 1.0 ['ENST00000447110.5_1_17:8814820-8869022:-|nuORF', 'ENST00000583222.1_1_17:8820058-8869022:-|nuORF'] 102364 21026 SPVKKGSS True H1975_Epitope_Rep2 788.43921740692 788.43812993586 87.03 2 -2.4733168324403763 0.458776638146357 1.0 ['ENST00000234668.6_1_1:85647735-85666124:-|nuORF', 'nc|ENSG00000097096|Q5VT97-2|SYDE2', 'ENSG00000097096|ENST00000341460|SYDE2'] 99047 15371 SKTSGKAK True NCI_RA007_Epitope_Rep4 805.4657665079299 805.46466993586 66.798 2 -2.4737847843948693 0.45879477096397064 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 62346 22289 LLRLAKEY True H1975_Epitope_Rep2 1004.60186605792 1004.60076993586 92.112 2 -2.4739345342141936 0.45879477096397064 1.0 ['CON__P02769'] 13828 3782 DQWMKKWWEMK True NCI_RA007_Epitope_Rep2 1594.7424760183396 1594.7413699358601 19.35 2 -2.4744557469103023 0.45879477096397064 1.0 ['nc|ENSG00000130234|Q9BYF1-3|ACE2', 'ENSG00000130234|ENST00000252519|ACE2'] 115086 17757 TTTTTVTKL True NCI_RA007_Epitope_Rep5 964.54407639828 964.54296993586 75.086 2 -2.4747033589069853 0.45879477096397064 1.0 ['ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 79430 15398 PGPHGLSP True NCI_RA007_Epitope_Rep2 760.38678791124 760.38623496793 64.595 1 -2.474912069011333 0.45879477096397064 1.0 ['ENST00000361441.4_1_22:39414388-39414700:+|nuORF'] 38336 16390 HFYRRYFWLVV True NCI_RA007_Epitope_Rep1 1584.8353882334 1584.8342899358602 67.866 2 -2.475600445523694 0.4588217789161556 1.0 ['ENSG00000188582|ENST00000340634|PAQR9'] 32237 3095 GFGRHVGI True PC9_epitope_Rep5 841.4558705305699 841.45476993586 16.893 2 -2.4766184320343174 0.45884390974886546 1.0 ['ENST00000283429.10_1_16:4524572-4524719:-|nuORF'] 119883 25029 VEVTLQTGIK True NCI_RA007_Epitope_Rep5 1086.62847472858 1086.62736993586 103.78 2 -2.4773034159166225 0.45884390974886546 1.0 ['MTR|p.E130V|1|0.11|ENSG00000116984|chr1:236808753-236808753|A/T|missense_variant'] 81365 18996 PPSNPAQL True NCI_RA007_Epitope_Rep4 822.42356734278 822.42246993586 82.165 2 -2.4776635916512304 0.45884478452627664 1.0 ['ARHGAP5|p.G1470A|1|0.22|ENSG00000100852|chr14:32154848-32154848|G/C|missense_variant'] 140773 14987 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 66.396 2 -2.477730524523809 0.45884478452627664 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 52065 19922 KLKKNKKNSH True NCI_RA007_Epitope_Rep2 1223.74623887583 1223.7451499358601 82.492 2 -2.4785099968747843 0.4588726646687496 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 81696 24800 PRVIPNVH True PC9_epitope_Rep1 930.5399345077001 930.53882993586 100.28 2 -2.4786678693995174 0.4588726646687496 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 76241 16535 NSCHQSET True NCI_RA007_Epitope_Rep5 904.3344946382001 904.3333899358599 70.362 2 -2.478806821272851 0.4588726646687496 1.0 ['ENST00000305557.9_1_2:74666917-74667613:-|nuORF'] 13339 18539 DMKKAITY True NCI_RA007_Epitope_Rep5 968.50010341132 968.49900993586 78.137 2 -2.4792613943006674 0.4588784152860285 1.0 ['ENSG00000164219|ENST00000419445|PGGT1B', 'ENST00000296642.4_1_5:114552647-114588833:-|nuORF', 'nc|ENSG00000164219|P53609-2|PGGT1B'] 4156 25099 AHYGSPEP True PC9_epitope_Rep3 856.3715317699199 856.37042993586 101.89 2 -2.480142358174141 0.4588899161539197 1.0 ['FILIP1|p.A118P|1|0.09|ENSG00000118407|chr6:75362842-75362842|C/G|missense_variant'] 124895 10853 VLLPFCGP True NCI_RA007_Epitope_Rep5 844.4516966669199 844.45058993586 48.381 2 -2.4804468348414783 0.4588899161539197 1.0 ['OR4C12|p.W163L|1|0.19|ENSG00000221954|chr11:49982014-49982014|C/A|missense_variant'] 9713 17982 AYIPSHSD True H1975_Epitope_Rep3 888.39774651776 888.39664993586 75.321 2 -2.4806163745984984 0.45889566640453977 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 133502 24965 WHARHVFL True PC9_epitope_Rep2 1064.56681796188 1064.5657299358602 101.69 2 -2.480685959759939 0.45889653999829977 1.0 ['ENST00000322940.10_1_9:111702093-111702270:+|nuORF'] 21857 12729 ESEDRLNRLDK True PC9_epitope_Rep5 1373.68990576817 1373.68880993586 53.969 2 -2.4807631397300405 0.45889653999829977 1.0 ['ENSG00000118292|ENST00000369099|C1orf54'] 28515 7730 FSGTDLPAA True H1975_Epitope_Rep3 877.41814760917 877.41704993586 34.716 2 -2.4817748191662767 0.4588974135549274 1.0 ['nc|ENSG00000183117|Q96PZ7-3|CSMD1', 'nc|ENSG00000183117|Q96PZ7-2|CSMD1', 'CSMD1|p.I3493Ffs*8|1|0.24|ENSG00000183117|chr8:2942534-2942534|G/-|frameshift_variant', 'ENSG00000183117|ENST00000635120|CSMD1', 'ENST00000523387.5_1_8:2986336-3141840:-|nuORF'] 68451 16602 LTTTRRAV True PC9_epitope_Rep4 916.5454138109599 916.54430993586 71.835 2 -2.4819927860391 0.4588974135549274 1.0 ['nc|ENSG00000120594|Q6UX71-2|PLXDC2', 'ENSG00000120594|ENST00000377252|PLXDC2', 'nc|ENSG00000120594|Q6UX71-3|PLXDC2', 'ENST00000377238.2_1_10:20332341-20568745:+|nuORF'] 122409 14716 VGSGSKGK True NCI_RA007_Epitope_Rep2 718.3973525949399 718.39680496793 61.914 1 -2.4831598916767277 0.45893504202662927 1.0 ['ENSG00000115541|ENST00000233893|HSPE1', 'ENST00000463841.1_1_2:198365719-198367897:+|nuORF', 'ENST00000554777.2_1_14:64068346-64068445:+|nuORF', 'ENST00000473395.1_1_2:198365100-198366019:+|nuORF'] 61754 26915 LLKAFIAN True PC9_epitope_Rep1 888.54328855264 888.54274496793 109.59 1 -2.4833213031963326 0.4589359147371665 1.0 ['ENSG00000197386|ENST00000355072|HTT', 'HTT|p.K440Rfs*14|1|0.14|ENSG00000197386|chr4:3122931-3122932|AA/-|frameshift_variant'] 9722 18928 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 81.853 2 -2.4833596841628065 0.4589359147371665 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 80970 22317 PNHQTPME True NCI_RA007_Epitope_Rep5 952.4072656556399 952.40616993586 92.994 2 -2.484356999980515 0.45895316218973137 1.0 ['ENSG00000126249|ENST00000246535|PDCD2L'] 32615 23257 GHFCLCPL True PC9_epitope_Rep3 888.39861554824 888.39750993586 94.734 2 -2.484366396627012 0.45895316218973137 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 109418 23181 TGQRVCSV True NCI_RA007_Epitope_Rep5 848.4174364165199 848.41632993586 96.426 2 -2.4848110569832516 0.45895316218973137 1.0 ['ENSG00000160410|ENST00000291842|SHKBP1'] 112469 23478 TNQKIRKT True PC9_epitope_Rep1 987.58252759567 987.58142993586 95.093 2 -2.4853813627656063 0.45895839530831667 1.0 ['nc|ENSG00000127054|Q5TA45-2|INTS11', 'nc|ENSG00000127054|Q5TA45-4|INTS11', 'nc|ENSG00000127054|Q5TA45-3|INTS11', 'ENSG00000127054|ENST00000435064|INTS11', 'nc|ENSG00000127054|Q5TA45-5|INTS11', 'ENST00000478641.5_1_1:1248876-1249468:-|nuORF', 'ENST00000470030.6_1_1:1248876-1250311:-|nuORF'] 125752 25609 VNGLKITT True PC9_epitope_Rep3 844.5018176634801 844.50072993586 104.0 2 -2.4854061941417633 0.45895839530831667 1.0 ['ENSG00000003393|ENST00000264276|ALS2', 'ENST00000482891.5_1_2:202587756-202633608:-|nuORF'] 91218 24359 RLRLRNVFRR True PC9_epitope_Rep4 1384.8640030230797 1384.8629099358602 102.18 2 -2.4854984805867333 0.45895839530831667 1.0 ['TYK2|p.D1138Tfs*11|1|0.17|ENSG00000105397|chr19:10351070-10351070|G/-|frameshift_variant', 'ENSG00000105397|ENST00000525621|TYK2', 'TYK2|p.T1106Rfs*7|2|0.22|ENSG00000105397|chr19:10352437-10352437|G/-|frameshift_variant', 'TYK2-KEAP1|1|fusion'] 40436 13542 HSAKSGGS True NCI_RA007_Epitope_Rep5 729.34056599481 729.3400149679301 58.775 1 -2.4856796615837995 0.45895839530831667 1.0 ['nc|ENSG00000049618|Q8NFD5|ARID1B', 'nc|ENSG00000049618|Q8NFD5-2|ARID1B', 'ENSG00000049618|ENST00000636930|ARID1B', 'nc|ENSG00000049618|Q8NFD5-1|ARID1B', 'ARID1B|p.P850Rfs*77|1|0.19|ENSG00000049618|chr6:157148660-157148664|CCAGT/-|frameshift_variant', 'ARID1B|p.N971Kfs*6|2|0.23|ENSG00000049618|chr6:157167112-157167112|C/-|frameshift_variant'] 127276 25696 VQLGPGPK True PC9_epitope_Rep3 794.46503823194 794.46394993586 104.38 2 -2.486243057228267 0.45895839530831667 1.0 ['ENST00000483071.1_1_3:50327227-50327497:-|nuORF', 'ENST00000489569.1_1_3:50326758-50327694:-|nuORF', 'ENST00000414734.5_1_3:50327100-50328031:-|nuORF', 'ENSG00000214706|ENST00000417626|IFRD2'] 38302 12879 HFPEVMLG True NCI_RA007_Epitope_Rep1 928.4476739156399 928.44656993586 54.087 2 -2.4863289987276467 0.45895839530831667 1.0 ['ENST00000510529.1_1_5:137013137-137034053:-|nuORF', 'ENST00000515334.5_1_5:137008460-137041741:-|nuORF', 'nc|ENSG00000146021|Q9UH77-3|KLHL3', 'nc|ENSG00000146021|Q9UH77-2|KLHL3', 'ENSG00000146021|ENST00000309755|KLHL3', 'ENST00000504496.5_1_5:136997591-137028142:-|nuORF', 'ENST00000504208.5_1_5:136964069-137033992:-|nuORF'] 59479 21289 LGPAGKAP True PC9_epitope_Rep1 709.41227438309 709.41172496793 86.715 1 -2.4869799369254144 0.45895839530831667 1.0 ['ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'SLC4A7|p.G1175Efs*11|1|0.32|ENSG00000033867|chr3:27383192-27383192|C/-|frameshift_variant', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-10|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-14|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-11|SLC4A7', 'ENST00000454389.5_2_3:27462227-27462263:-|nuORF'] 82774 21221 PVRLSSVSS True H1975_Epitope_Rep3 930.51344497634 930.51234993586 88.632 2 -2.4872499989864543 0.45895839530831667 1.0 ['nc|ENSG00000170873|O43312-2|MTSS1', 'nc|ENSG00000170873|O43312-4|MTSS1', 'ENSG00000170873|ENST00000518547|MTSS1', 'nc|ENSG00000170873|O43312-5|MTSS1'] 52367 22312 KPGERKKT True PC9_epitope_Rep3 942.5610638750999 942.55996993586 91.108 2 -2.4873394038842895 0.45895839530831667 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 32562 20607 GGVSAKGK True PC9_epitope_Rep2 702.4024379753799 702.4018849679301 84.698 1 -2.4874226117791807 0.45895839530831667 1.0 ['ENST00000505973.1_1_2:27805995-27824299:+|nuORF', 'nc|ENSG00000243943|Q96ME7-2|ZNF512', 'nc|ENSG00000243943|Q96ME7-3|ZNF512', 'ENSG00000243943|ENST00000355467|ZNF512'] 91121 20882 RLNIAIFF True H1975_Epitope_Rep1 992.58073669052 992.57962993586 86.766 2 -2.487724437663028 0.45895839530831667 1.0 ['ENSG00000170417|ENST00000412401|TMEM182'] 122535 24107 VGSVKWVP True NCI_RA007_Epitope_Rep1 870.4963383602199 870.49524993586 99.854 2 -2.4881055658444433 0.45895839530831667 1.0 ['nc|ENSG00000072958|Q9BXS5-2|AP1M1', 'ENSG00000072958|ENST00000291439|AP1M1'] 127698 21118 VRGSAFAK True NCI_RA007_Epitope_Rep5 834.47118624154 834.47008993586 88.25 2 -2.4898973430240923 0.4590172642762284 1.0 ['nc|ENSG00000006576|Q8N3S3-3|PHTF2', 'nc|ENSG00000006576|Q8N3S3-2|PHTF2', 'ENSG00000006576|ENST00000416283|PHTF2', 'nc|ENSG00000006576|Q8N3S3-6|PHTF2', 'nc|ENSG00000006576|Q8N3S3-5|PHTF2', 'nc|ENSG00000006576|Q8N3S3-7|PHTF2', 'PHTF2|p.L570Cfs*4|1|0.31|ENSG00000006576|chr7:77940264-77940264|T/-|frameshift_variant', 'nc|ENSG00000006576|Q8N3S3-4|PHTF2'] 29905 11848 FWEIRYMYFYF True NCI_RA007_Epitope_Rep1 1663.75335797187 1663.75226993586 50.067 2 -2.4912168878567256 0.4590655079361707 1.0 ['nc|ENSG00000196712|P21359-5|NF1'] 75216 25685 NPFIRRQI True PC9_epitope_Rep1 1042.60359739342 1042.60250993586 103.83 2 -2.491501116405008 0.45907125479405486 1.0 ['ENSG00000227124|ENST00000652011|ZNF717'] 52978 22711 KRPNPELRR True PC9_epitope_Rep6 1164.68397297244 1164.68286993586 100.43 2 -2.4919904777351123 0.45907212442499123 1.0 ['nc|ENSG00000111206|Q08050-2|FOXM1', 'ENSG00000111206|ENST00000359843|FOXM1', 'nc|ENSG00000111206|Q08050-3|FOXM1', 'chr12:2861412-2864320|495|21.51|0.58|5.22|-|ENST00000342628|FOXM1,FOXM1'] 99834 8376 SLGWGAPH True NCI_RA007_Epitope_Rep4 823.39768694811 823.39713496793 39.032 1 -2.492509187096494 0.45907212442499123 1.0 ['MAP3K4|p.D510H|1|0.32|ENSG00000085511|chr6:161049800-161049800|G/C|missense_variant'] 86761 23113 QRLLFVVF True NCI_RA007_Epitope_Rep5 1020.6120368187999 1020.61092993586 96.155 2 -2.493015411372934 0.4590778710294274 1.0 ['ENSG00000169327|ENST00000304418|OR5AU1', 'nc|ENSG00000169327|Q8NGC0|OR5AU1'] 47224 18931 IYDPKLQT True H1975_Epitope_Rep2 976.5229470308801 976.52184993586 78.584 2 -2.493526848999875 0.459078740492075 1.0 ['nc|ENSG00000165240|Q04656-5|ATP7A', 'ENSG00000165240|ENST00000341514|ATP7A', 'nc|ENSG00000165240|Q04656-2|ATP7A', 'nc|ENSG00000165240|Q04656-3|ATP7A'] 75910 24084 NRDSPGYP True H1975_Epitope_Rep1 904.4038945273599 904.40278993586 99.918 2 -2.493529673275894 0.459078740492075 1.0 ['ENSG00000196628|ENST00000354452|TCF4', 'nc|ENSG00000196628|P15884-5|TCF4', 'nc|ENSG00000196628|P15884|TCF4', 'nc|ENSG00000196628|P15884-4|TCF4', 'nc|ENSG00000196628|P15884-12|TCF4', 'nc|ENSG00000196628|P15884-13|TCF4', 'nc|ENSG00000196628|P15884-14|TCF4', 'nc|ENSG00000196628|P15884-10|TCF4', 'nc|ENSG00000196628|P15884-11|TCF4', 'nc|ENSG00000196628|P15884-7|TCF4', 'nc|ENSG00000196628|P15884-15|TCF4', 'nc|ENSG00000196628|P15884-9|TCF4', 'nc|ENSG00000196628|P15884-2|TCF4', 'nc|ENSG00000196628|P15884-6|TCF4', 'nc|ENSG00000196628|P15884-8|TCF4', 'ENST00000563686.5_1_18:52937038-53128316:-|nuORF', 'ENST00000562680.5_1_18:52899738-53018213:-|nuORF', 'ENST00000563760.5_1_18:52921909-52988969:-|nuORF'] 77067 22011 NWGGLGLL True PC9_epitope_Rep6 828.4493881678 828.44828993586 97.588 2 -2.4942705819299253 0.4591163566443224 1.0 ['ENST00000238379.9_1_9:116136341-116136734:-|nuORF'] 121390 24177 VGHSAGHP True PC9_epitope_Rep3 760.36163579256 760.36052993586 98.285 2 -2.4948450894873977 0.45913967073818374 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 71174 20466 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 85.667 2 -2.4950740893411703 0.45913967073818374 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 110847 24851 TKVLLALPT True NCI_RA007_Epitope_Rep5 954.6113681124599 954.6108149679301 103.08 1 -2.49550269954158 0.45913967073818374 1.0 ['ENST00000508913.5_1_5:43043449-43044931:+|nuORF'] 120742 8367 VGAVHVLH True NCI_RA007_Epitope_Rep4 830.47627162198 830.47516993586 38.999 2 -2.496059883950732 0.45913967073818374 1.0 ['ENSG00000160796|ENST00000450053|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2', 'nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2', 'NBEAL2|p.R265H|1|0.49|ENSG00000160796|chr3:46991557-46991557|G/A|missense_variant'] 114568 22859 TSKKTGGG True PC9_epitope_Rep4 734.3922672144998 734.39171496793 96.148 1 -2.4965762374520026 0.45913967073818374 1.0 ['ENST00000426393.5_1_1:63786855-63787154:-|nuORF', 'ENST00000418244.5_1_1:63786852-63787391:-|nuORF', 'ENST00000431294.5_1_1:63786852-63789241:-|nuORF'] 41451 7385 IAVTGDKK True PC9_epitope_Rep1 830.48616759934 830.48506993586 33.219 2 -2.4968142865722553 0.45913967073818374 1.0 ['ENSG00000006788|ENST00000252172|MYH13'] 25216 9761 FEALGTAL True PC9_epitope_Rep1 820.43306939732 820.43196993586 42.404 2 -2.4969582961582426 0.45913967073818374 1.0 ['nc|ENSG00000175216|Q14008-2|CKAP5', 'ENSG00000175216|ENST00000529230|CKAP5', 'nc|ENSG00000175216|Q14008-3|CKAP5', 'CKAP5|p.T1186Lfs*11|1|0.15|ENSG00000175216|chr11:46763612-46763612|T/-|frameshift_variant'] 6907 18614 AQKLSEIHK True NCI_RA007_Epitope_Rep2 1052.59784330664 1052.59674993586 77.202 2 -2.4969597463414805 0.45913967073818374 1.0 ['ENSG00000174607|ENST00000310836|UGT8'] 52374 24890 KPGFIKVVR True NCI_RA007_Epitope_Rep1 1042.66513502082 1042.66402993586 103.02 2 -2.4974586769497304 0.45913967073818374 1.0 ['ENSG00000110328|ENST00000227756|GALNT18'] 136951 23772 YKGQKGLVI True H1975_Epitope_Rep2 1004.6018660579198 1004.60076993586 97.943 2 -2.4977560978009383 0.45913967073818374 1.0 ['ENSG00000155660|ENST00000652332|PDIA4'] 49504 22580 KKCVVIDL True PC9_epitope_Rep1 916.5415743004799 916.54046993586 91.662 2 -2.497757126994235 0.45913967073818374 1.0 ['nc|ENSG00000144677|O15194-2|CTDSPL', 'ENSG00000144677|ENST00000273179|CTDSPL'] 70191 25002 LYLLVRKH True PC9_epitope_Rep3 1040.64948495668 1040.6483899358602 101.52 2 -2.497787404245682 0.45913967073818374 1.0 ['ENSG00000180758|ENST00000377411|GPR157'] 111360 23840 TLILMFAW True PC9_epitope_Rep2 993.53576064405 993.53466993586 97.171 2 -2.4977931014753665 0.45913967073818374 1.0 ['ENSG00000146477|ENST00000275300|SLC22A3'] 14175 1852 DSPMRSFPLLQ True H1975_Epitope_Rep2 1289.64380752289 1289.64217490379 9.9503 3 -2.497888759541957 0.45913967073818374 1.0 ['ENST00000452101.1_1_2:220307854-220309390:+|nuORF'] 10535 16949 CPPPCSSV True H1975_Epitope_Rep2 788.3196965212001 788.31858993586 70.439 2 -2.4979662657121557 0.45913967073818374 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 103275 20888 SQTKKLQAK True PC9_epitope_Rep6 1030.61349337078 1030.6129749679299 93.119 1 -2.498064044522067 0.45913967073818374 1.0 ['ENSG00000216937|ENST00000639629|CCDC7'] 80024 23038 PKGHGGAR True PC9_epitope_Rep4 778.41981937502 778.41872993586 96.838 2 -2.4982973108091193 0.45913967073818374 1.0 ['ENST00000427323.5_1_3:38388271-38390057:+|nuORF'] 44006 23854 ILHYDETY True H1975_Epitope_Rep2 1052.4814761417201 1052.4803699358602 98.263 2 -2.498487765728328 0.45915603657953713 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 39249 24874 HLLNAKAT True NCI_RA007_Epitope_Rep5 866.49740098938 866.49630993586 103.17 2 -2.499282873957712 0.459168392544209 1.0 ['ENST00000543938.5_1_15:83328314-83349061:-|nuORF', 'nc|ENSG00000103723|Q13367-3|AP3B2', 'nc|ENSG00000103723|Q13367|AP3B2', 'ENSG00000103723|ENST00000535359|AP3B2'] 77684 5590 PAAANVRK True PC9_epitope_Rep2 825.48208527841 825.48098993586 26.89 2 -2.4993582714390348 0.459168392544209 1.0 ['nc|ENSG00000204842|Q99700-2|ATXN2', 'ENSG00000204842|ENST00000673436|ATXN2', 'nc|ENSG00000204842|Q99700-4|ATXN2', 'nc|ENSG00000204842|Q99700|ATXN2', 'ATXN2|p.A578Qfs*70|1|0.18|ENSG00000204842|chr12:111516277-111516277|C/-|frameshift_variant', 'ENST00000549455.1_1_12:111963110-112036838:-|nuORF'] 38360 23965 HGDTALHA True NCI_RA007_Epitope_Rep1 820.3827651599601 820.38166993586 99.189 2 -2.4994958244460546 0.459168392544209 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 79863 22552 PIILVLLDVFR True PC9_epitope_Rep3 1296.8169442045998 1296.8158499358601 92.015 2 -2.4995332917649287 0.459168392544209 1.0 ['ENST00000420415.5_2_3:195778645-195778717:-|nuORF'] 56040 11728 LDKNPPQG True H1975_Epitope_Rep1 867.4450310633499 867.4444849679301 50.104 1 -2.499885170587526 0.4591692598532239 1.0 ['nc|ENSG00000186635|Q96P48-3|ARAP1', 'ENSG00000186635|ENST00000393609|ARAP1', 'nc|ENSG00000186635|Q96P48-2|ARAP1', 'nc|ENSG00000186635|Q96P48-4|ARAP1', 'nc|ENSG00000186635|Q96P48-1|ARAP1', 'ENST00000465814.5_1_11:72407932-72423670:-|nuORF', 'nc|ENSG00000186635|Q96P48-7|ARAP1'] 126618 23305 VPPRTTTK True H1975_Epitope_Rep3 898.52361573722 898.52250993586 97.293 2 -2.500155459735967 0.4591692598532239 1.0 ['nc|ENSG00000170579|O14490-7|DLGAP1', 'ENSG00000170579|ENST00000315677|DLGAP1', 'nc|ENSG00000170579|O14490-3|DLGAP1', 'nc|ENSG00000170579|O14490-2|DLGAP1', 'nc|ENSG00000170579|O14490-4|DLGAP1', 'nc|ENSG00000170579|O14490-6|DLGAP1'] 96072 3821 SECPWPCL True PC9_epitope_Rep5 933.3724603700499 933.37136993586 19.78 2 -2.5005121198497617 0.45917500371715625 1.0 ['ENST00000447767.1_1_20:57099243-57099402:+|nuORF'] 65820 24527 LSKGGWAP True PC9_epitope_Rep3 814.43373810366 814.43264993586 99.687 2 -2.500664139914716 0.45918074745908516 1.0 ['ENST00000308713.9_3_16:29910520-29910610:-|nuORF'] 140774 15066 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 66.737 2 -2.5007012057263887 0.45918649107901444 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 91041 21121 RLLAGFCK True H1975_Epitope_Rep1 906.51094287854 906.50984993586 87.737 2 -2.50124656195933 0.45920372120684344 1.0 ['nc|ENSG00000292277|Q9UJ98|STAG3', 'ENSG00000066923|ENST00000615138|STAG3', 'nc|ENSG00000292277|Q9UJ98-3|STAG3'] 78275 23444 PARRVIES True PC9_epitope_Rep1 926.5297637468199 926.52866993586 94.962 2 -2.5013185520278296 0.45920372120684344 1.0 ['ENST00000403263.5_1_2:206863772-206864039:-|nuORF'] 97971 26258 SHRQDYLV True NCI_RA007_Epitope_Rep5 1016.5039429217999 1016.50284993586 108.59 2 -2.501889324810535 0.45920372120684344 1.0 ['ENSG00000182793|ENST00000370989|GSTA5'] 77841 23419 PAGAQVRL True H1975_Epitope_Rep2 810.47118624154 810.47008993586 96.548 2 -2.501942631792491 0.45920458769181755 1.0 ['ENSG00000163501|ENST00000295731|IHH'] 63658 21615 LPPDGHGP True PC9_epitope_Rep1 788.3817025308 788.38115496793 87.968 1 -2.5020082386572913 0.45920458769181755 1.0 ['ENST00000359450.6_1_17:27404640-27404928:-|nuORF'] 140777 15311 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 67.783 2 -2.502220844973447 0.4592103306926067 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 80105 21662 PKGSVPPA True PC9_epitope_Rep6 751.42283906679 751.42174993586 96.207 2 -2.502615765746725 0.45921119700959984 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant', 'PCLO|p.L4048Hfs*3|1|0.42|ENSG00000186472|chr7:82915843-82915844|-/T|frameshift_variant'] 110799 16507 TKRALPNN True NCI_RA007_Epitope_Rep3 912.51411368268 912.5130099358599 72.728 2 -2.5028843522954882 0.45921119700959984 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53'] 101365 23462 SMKVKASS True H1975_Epitope_Rep3 836.4425885352 836.44203496793 97.916 1 -2.503157632070372 0.4592381781690365 1.0 ['ENST00000418170.5_1_22:35660034-35689641:+|nuORF', 'ENSG00000100281|ENST00000216106|HMGXB4'] 41616 15818 IDGILPLHDAV True PC9_epitope_Rep3 1161.63937376545 1161.63826993586 66.0 2 -2.504897117793921 0.45925453966231283 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 70688 10826 MDKDGYFWFVA True PC9_epitope_Rep6 1377.60635938501 1377.6052699358602 52.494 2 -2.5051425998346204 0.45926114703789833 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 99833 8181 SLGWGAPH True NCI_RA007_Epitope_Rep3 823.39768694811 823.39713496793 39.303 1 -2.5052132450558084 0.45926114703789833 1.0 ['MAP3K4|p.D510H|1|0.32|ENSG00000085511|chr6:161049800-161049800|G/C|missense_variant'] 87913 18322 QVNHTMEV True NCI_RA007_Epitope_Rep5 956.4385657839199 956.43746993586 77.277 2 -2.5052838999719675 0.45926114703789833 1.0 ['ENST00000563209.1_1_16:58545213-58545477:+|nuORF', 'nc|ENSG00000103034|Q9ULP0-4|NDRG4', 'nc|ENSG00000103034|Q9ULP0-2|NDRG4', 'ENSG00000103034|ENST00000570248|NDRG4', 'nc|ENSG00000103034|Q9ULP0-8|NDRG4', 'nc|ENSG00000103034|Q9ULP0-5|NDRG4', 'nc|ENSG00000103034|Q9ULP0-7|NDRG4', 'nc|ENSG00000103034|Q9ULP0-3|NDRG4', 'nc|ENSG00000103034|Q9ULP0-6|NDRG4'] 51849 18932 KKLPMFLG True H1975_Epitope_Rep2 932.5517450613598 932.55064993586 78.588 2 -2.5057612273687 0.4592881262344171 1.0 ['ENST00000274140.9_1_5:10436866-10436944:+|nuORF'] 102550 18545 SQALKEHLK True NCI_RA007_Epitope_Rep5 1052.59784330664 1052.59674993586 78.16 2 -2.507300623244492 0.4593363419166445 1.0 ['ENST00000433921.5_1_2:219503064-219516433:-|nuORF', 'nc|ENSG00000115568|P52746|ZNF142', 'ENSG00000115568|ENST00000411696|ZNF142'] 109366 16949 TGISVRKR True NCI_RA007_Epitope_Rep4 915.5613982282699 915.56030993586 73.451 2 -2.5077424965169484 0.45933720547479745 1.0 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 57074 11044 LEEKQRSL True PC9_epitope_Rep2 1001.5505587610498 1001.54946993586 47.799 2 -2.5080993046690274 0.45933720547479745 1.0 ['ENSG00000196553|ENST00000636229|CCDC196'] 45887 14691 ISQYHSKGKEP True PC9_epitope_Rep2 1272.6462500510397 1272.6451499358602 61.773 2 -2.508515516839454 0.45935356452674725 1.0 ['nc|ENSG00000196323|Q8NCP5|ZBTB44', 'ENSG00000196323|ENST00000357899|ZBTB44'] 45676 21619 ISKMKPPV True PC9_epitope_Rep4 898.5310096167799 898.53046496793 91.347 1 -2.508856562960271 0.4593593051529534 1.0 ['nc|ENSG00000108352|Q9UHV5|RAPGEFL1', 'ENSG00000108352|ENST00000620260|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-3|RAPGEFL1', 'nc|ENSG00000108352|Q9UHV5-2|RAPGEFL1', 'ENST00000545893.5_1_17:38345052-38350037:+|nuORF', 'ENST00000496032.1_1_17:38347852-38349010:+|nuORF'] 34004 16671 GNINAVHLK True NCI_RA007_Epitope_Rep3 964.54541381096 964.54430993586 73.385 2 -2.5101398223715594 0.45941411932089654 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 12428 25244 DKKEILKK True NCI_RA007_Epitope_Rep3 1000.6280808057599 1000.62698993586 109.1 2 -2.5105371673199666 0.45941411932089654 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'nc|ENSG00000048649|Q96T23-3|RSF1'] 121397 20930 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 93.28 2 -2.510597916465517 0.45941411932089654 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 6145 24173 APNTQRKP True PC9_epitope_Rep2 910.4984636185399 910.49791496793 98.507 1 -2.5106543267983192 0.45941411932089654 1.0 ['ENSG00000111254|ENST00000228850|AKAP3'] 11432 11593 DFQQTLFPL True PC9_epitope_Rep4 1107.5600608155898 1107.5589699358602 52.351 2 -2.5124450583137654 0.45945257256917166 1.0 ['ENST00000341049.6_1_7:116199659-116199932:+|nuORF'] 126181 25066 VPGDVGTL True PC9_epitope_Rep2 756.40176926904 756.40066993586 102.08 2 -2.5130688698091013 0.45945257256917166 1.0 ['ENST00000533321.1_1_11:57510328-57510427:+|nuORF'] 14219 10224 DSVPPGGS True NCI_RA007_Epitope_Rep5 714.3184335679 714.31788496793 45.959 1 -2.513084365485607 0.45945257256917166 1.0 ['nc|ENSG00000089472|Q9BQS7-2|HEPH', 'ENSG00000089472|ENST00000343002|HEPH', 'nc|ENSG00000089472|Q9BQS7-3|HEPH'] 126098 15413 VPDSLKEDR True PC9_epitope_Rep2 1057.54038800017 1057.53928993586 64.566 2 -2.5137992109350615 0.4594959018133945 1.0 ['ENST00000496389.5_1_3:112738423-112780791:+|nuORF'] 115604 25386 TVIKWRIK True PC9_epitope_Rep3 1042.66513502082 1042.66402993586 103.07 2 -2.51462933743676 0.4594959018133945 1.0 ['L1PB1_dup5905|chr7:93807211-93809400:+|21.40037190329823|0.2056128638309657|6.7|496.0|32|2|sense'] 81507 23594 PQRIHHMA True NCI_RA007_Epitope_Rep5 988.5025034531601 988.50140993586 98.072 2 -2.515085163672911 0.4594967618643168 1.0 ['nc|ENSG00000155966|P51816-2|AFF2', 'nc|ENSG00000155966|P51816-6|AFF2', 'nc|ENSG00000155966|P51816-3|AFF2', 'nc|ENSG00000155966|P51816-5|AFF2', 'ENSG00000155966|ENST00000370460|AFF2', 'AFF2|p.P472Nfs*24|2|0.14|ENSG00000155966|chrX:148953596-148953596|C/AA|frameshift_variant', 'nc|ENSG00000155966|P51816-7|AFF2'] 76614 18095 NTGILNKHL True NCI_RA007_Epitope_Rep1 1008.5716285588001 1008.57052993586 74.528 2 -2.515280049802517 0.4594967618643168 1.0 ['ENSG00000198900|ENST00000361337|TOP1'] 118698 16877 VECMSCSM True NCI_RA007_Epitope_Rep5 888.2849678886 888.28386993586 71.674 2 -2.5158433418698896 0.45952373369005534 1.0 ['nc|ENSG00000152894|Q15262|PTPRK', 'ENSG00000152894|ENST00000368226|PTPRK', 'nc|ENSG00000152894|Q15262-3|PTPRK', 'nc|ENSG00000152894|Q15262-4|PTPRK'] 91411 24967 RNHVNIRYVA True PC9_epitope_Rep2 1240.6788875920001 1240.6777899358601 101.7 2 -2.5165039849380575 0.4595294717173433 1.0 ['ENST00000598377.2_2_19:53716896-53717031:+|nuORF'] 52066 19481 KLKKNKKNSH True NCI_RA007_Epitope_Rep5 1223.74623887583 1223.7451499358601 81.82 2 -2.5174318962263897 0.45956705912328943 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 71750 24680 MMMMMMMI True H1975_Epitope_Rep2 1048.37802305176 1048.37692993586 101.49 2 -2.518139449902702 0.45957365493226887 1.0 ['ENST00000429734.1_1_10:97949420-97949504:-|nuORF'] 30036 9915 FYILFFPFWIW True NCI_RA007_Epitope_Rep1 1577.8111305481698 1577.81002993586 42.57 2 -2.51868005254766 0.45957365493226887 1.0 ['ENSG00000126821|ENST00000247225|SGPP1'] 51875 25294 KKQKSYRK True PC9_epitope_Rep2 1064.6454622054 1064.64487496793 102.97 1 -2.5187657666483383 0.45957365493226887 1.0 ['chr1:200598421-200600050|487|13.53|0.62|4.44|-|1|KIF14,KIF14|1'] 123217 17438 VHLFEDAY True NCI_RA007_Epitope_Rep5 992.4603467743198 992.45924993586 73.859 2 -2.5190762327315874 0.45959000817435797 1.0 ['ENST00000472719.5_1_2:27008929-27016144:+|nuORF', 'nc|ENSG00000115163|P49450-2|CENPA', 'ENST00000419525.5_1_2:27015485-27016144:+|nuORF', 'ENST00000475662.5_1_2:26987167-27016144:+|nuORF', 'ENSG00000115163|ENST00000335756|CENPA'] 103245 22734 SQSSVKKA True PC9_epitope_Rep2 833.4606811274899 833.45958993586 92.942 2 -2.5195092811634283 0.45959574513259305 1.0 ['ENSG00000108599|ENST00000225737|AKAP10'] 34002 17623 GNINAVHLK True NCI_RA007_Epitope_Rep1 964.54541381096 964.54430993586 72.686 2 -2.520506781805336 0.4596120977929702 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 140775 15144 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 67.082 2 -2.5209703473433964 0.4596350434699532 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 33943 16502 GNAKELRVP True NCI_RA007_Epitope_Rep3 982.5559784946598 982.55488993586 72.709 2 -2.521226003028315 0.4596350434699532 1.0 ['ENST00000301459.4_1_11:63678704-63678836:-|nuORF'] 52067 19575 KLKKNKKNSH True NCI_RA007_Epitope_Rep5 1223.74623887583 1223.7451499358601 82.19 2 -2.521230711266432 0.4596350434699532 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 42763 10019 IFGEAAPF True NCI_RA007_Epitope_Rep3 850.4225047136199 850.42140993586 46.501 2 -2.521517993782764 0.4596350434699532 1.0 ['ENSG00000264424|ENST00000255381|MYH4', 'MYH4|p.K643Rfs*17|1|0.4|ENSG00000264424|chr17:10456525-10456525|T/-|frameshift_variant', 'MYH1|p.N889Mfs*24|1|0.13|ENSG00000109061|chr17:10504835-10504835|T/-|frameshift_variant', 'MYH1|p.E65Kfs*6|1|0.43|ENSG00000109061|chr17:10516450-10516450|C/-|frameshift_variant'] 121402 22255 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 98.563 2 -2.522216801906064 0.459640779584731 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 59560 12335 LGRGPGNP True NCI_RA007_Epitope_Rep5 766.4085859849799 766.40748993586 54.095 2 -2.5230435764957364 0.45964163641381656 1.0 ['ENST00000382952.7_2_4:1205816-1205999:-|nuORF'] 29829 23581 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 97.194 2 -2.523045816491708 0.45964163641381656 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 60910 24940 LKTVCAAR True H1975_Epitope_Rep3 860.4902074339599 860.48965496793 103.75 1 -2.5236683840860836 0.4596482289377873 1.0 ['ENSG00000126266|ENST00000246553|FFAR1'] 130824 24292 VVFKKMVP True H1975_Epitope_Rep2 946.5673951254998 946.56628993586 99.963 2 -2.523744013867114 0.4596482289377873 1.0 ['ENST00000428809.5_1_21:15516217-15516304:+|nuORF'] 11537 7756 DGLQQPVL True NCI_RA007_Epitope_Rep2 868.4654321547599 868.46432993586 34.797 2 -2.5238911556386783 0.4596482289377873 1.0 ['nc|ENSG00000135317|Q9Y5W7-2|SNX14', 'nc|ENSG00000135317|Q9Y5W7-3|SNX14', 'nc|ENSG00000135317|Q9Y5W7-4|SNX14', 'ENSG00000135317|ENST00000314673|SNX14', 'ENST00000474645.6_1_6:86215687-86217871:-|nuORF'] 83003 6901 PYHSPEDSR True PC9_epitope_Rep1 1086.47303671634 1086.47192993586 31.35 2 -2.525181804226882 0.459673738842484 1.0 ['nc|ENSG00000075043|O43526-3|KCNQ2', 'nc|ENSG00000075043|O43526-4|KCNQ2', 'nc|ENSG00000075043|O43526-5|KCNQ2', 'nc|ENSG00000075043|O43526-2|KCNQ2', 'ENSG00000075043|ENST00000359125|KCNQ2'] 64044 22386 LQDGNHLLF True PC9_epitope_Rep4 1055.5399940773498 1055.53947496793 94.342 1 -2.525808227171787 0.459673738842484 1.0 ['ENSG00000170899|ENST00000370963|GSTA4'] 91983 5314 RPREALSTNEC True PC9_epitope_Rep5 1274.6037336160598 1274.60209490379 25.454 3 -2.52610778028334 0.459673738842484 1.0 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'AGPS|p.R117Gfs*22|1|0.11|ENSG00000018510|chr2:177420351-177420351|G/-|frameshift_variant', 'ENSG00000018510|ENST00000264167|AGPS'] 81454 24455 PQKTDHPS True H1975_Epitope_Rep1 908.4351946556399 908.43408993586 101.37 2 -2.526359929265634 0.459673738842484 1.0 ['ENSG00000184371|ENST00000329608|CSF1'] 11040 24657 DDLKKAPQL True PC9_epitope_Rep4 1026.5709598524597 1026.5698699358602 103.34 2 -2.5267775318503625 0.459673738842484 1.0 ['ENST00000578618.5_1_18:5398595-5399237:-|nuORF'] 94199 23792 RWMKILGK True PC9_epitope_Rep1 1030.6109912729796 1030.60988993586 96.314 2 -2.526849391052825 0.459673738842484 1.0 ['ENST00000298281.8_1_11:82872486-82874784:+|nuORF'] 61156 14834 LLDIACWIH True PC9_epitope_Rep1 1082.55828699378 1082.5577749679298 61.878 1 -2.5268938561621805 0.459673738842484 1.0 ['ENSG00000117984|ENST00000236671|CTSD'] 78445 22105 PCKLVIPN True PC9_epitope_Rep4 882.4997094885 882.49860993586 93.243 2 -2.5271072851017715 0.459673738842484 1.0 ['nc|ENSG00000079308|Q9HBL0-1|TNS1', 'ENSG00000079308|ENST00000682258|TNS1', 'ENST00000490566.1_1_2:218669184-218678576:-|nuORF'] 68765 24167 LVDMAKKL True PC9_epitope_Rep2 916.54157430048 916.54046993586 98.485 2 -2.527159965321856 0.459673738842484 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 52361 17117 KPGERKKT True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 72.611 2 -2.52720045423892 0.459673738842484 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 108934 22217 TETKVTKTVKT True PC9_epitope_Rep6 1234.7132669816997 1234.7121699358602 98.414 2 -2.5276904327366534 0.45969008703035447 1.0 ['nc|ENSG00000099889|O00192-2|ARVCF', 'ENSG00000099889|ENST00000263207|ARVCF', 'ENST00000487793.5_1_22:19968732-19974706:-|nuORF', 'ENST00000473551.5_1_22:19968732-19978281:-|nuORF'] 70676 3479 MDHLCKAA True PC9_epitope_Rep2 887.39934382423 887.39824993586 18.661 2 -2.5279909834120216 0.45969582152598676 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF'] 40534 25215 HSPPSTLV True PC9_epitope_Rep1 836.4392174069201 836.43812993586 101.87 2 -2.528938742149501 0.4597546220627879 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 73466 7305 NEVLHQPLSE True PC9_epitope_Rep2 1164.5775017848798 1164.57640993586 33.484 2 -2.5295103535468795 0.4597767023263712 1.0 ['ENSG00000148513|ENST00000361713|ANKRD30A'] 25691 24985 FFFLFPRRRRR True PC9_epitope_Rep3 1596.9266032796397 1596.9255099358602 101.45 2 -2.5299969617928744 0.4597767023263712 1.0 ['ENST00000222747.7_1_7:120497939-120498116:-|nuORF'] 134083 14272 WQRERWQIWEL True NCI_RA007_Epitope_Rep5 1628.8211947212396 1628.82008993586 61.59 2 -2.5306435590067933 0.4597824356593261 1.0 ['ENSG00000047648|ENST00000337414|ARHGAP6', 'nc|ENSG00000047648|O43182-4|ARHGAP6', 'ENST00000489330.6_1_X:11156985-11160533:-|nuORF'] 134140 442 WREWFEAGLP True PC9_epitope_Rep1 1289.6193070272097 1289.61766490379 2.4381 3 -2.5311873887306104 0.4597881688705877 1.0 ['ABHD15|p.C268W|1|0.36|ENSG00000168792|chr17:29566163-29566163|G/C|missense_variant'] 15536 14417 EASEQSLKP True PC9_epitope_Rep1 987.4872897981498 987.48618993586 60.279 2 -2.531643732436233 0.4598045146295648 1.0 ['ENST00000366663.9_1_1:230974343-230974889:-|nuORF'] 93918 8821 RVKEYFSWLYY True H1975_Epitope_Rep1 1552.77145056416 1552.7703499358602 38.852 2 -2.5324354857071656 0.4598242709792436 1.0 ['ENSG00000196542|ENST00000620149|SPTSSB'] 81402 20545 PPVPVKKS True NCI_RA007_Epitope_Rep5 850.5276384885 850.52654993586 85.967 2 -2.5325488035093655 0.4598242709792436 1.0 ['SASH1|p.A989V|1|0.16|ENSG00000111961|chr6:148544436-148544436|C/T|missense_variant'] 83680 10513 QEALPEAPA True H1975_Epitope_Rep1 924.4552613938798 924.45416993586 45.39 2 -2.5325864987023055 0.4598242709792436 1.0 ['ENST00000485631.1_1_22:18189492-18210297:+|nuORF', 'nc|ENSG00000099968|Q9BXK5-4|BCL2L13', 'ENSG00000099968|ENST00000317582|BCL2L13'] 27952 25653 FQRKKKRKG True PC9_epitope_Rep1 1174.7410939257397 1174.7399899358602 103.71 2 -2.532697769605772 0.4598242709792436 1.0 ['ENST00000487412.5_1_13:33712982-33859775:-|nuORF'] 108865 21569 TERLASGVQV True NCI_RA007_Epitope_Rep5 1058.57202248162 1058.57092993586 90.052 2 -2.5327626722883982 0.4598242709792436 1.0 ['ENST00000438748.5_1_2:113299624-113300117:+|nuORF', 'ENST00000263331.9_1_2:113299748-113300117:+|nuORF'] 10392 16667 CLAAGRQI True NCI_RA007_Epitope_Rep5 830.4432572415401 830.44214993586 70.878 2 -2.533076169864995 0.4598242709792436 1.0 ['ABCB1|p.G1114Afs*33|1|0.14|ENSG00000085563|chr7:87509423-87509423|C/-|frameshift_variant', 'ENSG00000085563|ENST00000622132|ABCB1', 'ABCB1|p.D642Mfs*21|1|0.19|ENSG00000085563|chr7:87544964-87544964|A/-|frameshift_variant'] 51879 18276 KKREETEY True NCI_RA007_Epitope_Rep5 1081.5403880001697 1081.53928993586 77.103 2 -2.533128171374563 0.4598242709792436 1.0 ['ENST00000572330.5_1_17:4736842-4793277:+|nuORF'] 1597 21158 AEFLVKSK True H1975_Epitope_Rep1 920.53311779176 920.53202993586 87.895 2 -2.5331535340046036 0.4598242709792436 1.0 ['nc|ENSG00000004487|O60341|KDM1A', 'ENSG00000004487|ENST00000400181|KDM1A'] 110122 17800 TIARLNATK True NCI_RA007_Epitope_Rep4 986.58727862294 986.58618993586 77.068 2 -2.533479585064496 0.4598242709792436 1.0 ['ENSG00000100218|ENST00000216036|RSPH14'] 30534 9669 GAIPIEGA True PC9_epitope_Rep1 726.39120458534 726.39065496793 42.047 1 -2.5336709660690584 0.45983573505379993 1.0 ['ENSG00000134077|ENST00000452837|THUMPD3'] 78422 17727 PAYLDSHS True H1975_Epitope_Rep2 888.3977465177602 888.39664993586 73.509 2 -2.5337764405135217 0.45983573505379993 1.0 ['ENST00000430355.5_1_3:185316235-185316268:+|nuORF'] 9714 18062 AYIPSHSD True H1975_Epitope_Rep3 888.39774651776 888.39664993586 75.67 2 -2.534353628696881 0.4598414669086047 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 38357 22606 HGDTALHA True H1975_Epitope_Rep1 820.3827651599601 820.38166993586 94.021 2 -2.5345649193291044 0.4598423191604503 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 122345 22268 VGSALPRR True PC9_epitope_Rep3 854.50863437942 854.50752993586 90.94 2 -2.534902384041326 0.4598423191604503 1.0 ['ENST00000520709.5_1_8:92007907-92052988:-|nuORF', 'ENSG00000155099|ENST00000285419|PIP4P2'] 69820 23392 LWWRAPFVG True NCI_RA007_Epitope_Rep1 1130.6025347642599 1130.60142993586 96.329 2 -2.5354094860094722 0.4598480507629295 1.0 ['ENST00000420783.7_1_3:49050883-49050958:+|nuORF'] 73708 18000 NGSQILHKI True NCI_RA007_Epitope_Rep1 1008.5716285588 1008.57052993586 74.153 2 -2.53676872698255 0.45985231082629546 1.0 ['nc|ENSG00000061938|Q07912|TNK2', 'nc|ENSG00000061938|Q07912-3|TNK2', 'ENSG00000061938|ENST00000672887|TNK2', 'ENST00000481865.5_1_3:195596955-195610258:-|nuORF', 'nc|ENSG00000061938|Q07912-2|TNK2', 'ENST00000489628.1_1_3:195597236-195606066:-|nuORF'] 90417 17771 RIPKAGNR True NCI_RA007_Epitope_Rep3 910.5460825173 910.54498993586 77.917 2 -2.5371229055887237 0.45985231082629546 1.0 ['NEPRO|p.I276Ffs*5|1|0.24|ENSG00000163608|chr3:113011132-113011133|TT/-|frameshift_variant', 'nc|ENSG00000163608|Q6NW34-2|NEPRO', 'ENSG00000163608|ENST00000314400|NEPRO', 'ENST00000494575.5_1_3:112730211-112738494:-|nuORF', 'ENST00000486271.5_1_3:112732111-112738494:-|nuORF'] 110751 21427 TKKGSAGP True PC9_epitope_Rep2 744.4130026590799 744.4124549679301 87.891 1 -2.537307321485223 0.45985231082629546 1.0 ['ENSG00000196531|ENST00000454682|NACA'] 38362 22786 HGDTALHA True NCI_RA007_Epitope_Rep3 820.3827651599601 820.38166993586 99.061 2 -2.5376431512338202 0.45985231082629546 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 82221 24952 PTHPSLLT True PC9_epitope_Rep2 864.4705175352 864.46942993586 101.65 2 -2.5385215998122757 0.45985231082629546 1.0 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF'] 80353 20151 PLGHAVLS True NCI_RA007_Epitope_Rep4 792.4493881678001 792.44828993586 87.188 2 -2.53897566749789 0.45985231082629546 1.0 ['ENST00000503000.1_1_4:2332191-2332611:-|nuORF'] 40627 22457 HTFRGPHW True PC9_epitope_Rep6 1036.4991323248798 1036.4980299358601 99.376 2 -2.5392139852310733 0.45985231082629546 1.0 ['nc|ENSG00000128656|P15882-3|CHN1', 'ENSG00000128656|ENST00000409900|CHN1', 'ENST00000485882.1_1_2:175676980-175711685:-|nuORF', 'nc|ENSG00000128656|P15882-2|CHN1', 'nc|ENSG00000106069|P52757-6|CHN2', 'nc|ENSG00000106069|P52757-5|CHN2', 'nc|ENSG00000106069|P52757-7|CHN2', 'nc|ENSG00000106069|P52757-4|CHN2', 'nc|ENSG00000106069|P52757-8|CHN2', 'nc|ENSG00000106069|P52757-3|CHN2', 'ENSG00000106069|ENST00000222792|CHN2', 'nc|ENSG00000106069|P52757-9|CHN2'] 81694 22253 PRVIPNVH True NCI_RA007_Epitope_Rep5 930.5399345077001 930.53882993586 92.745 2 -2.539554833058488 0.45985231082629546 1.0 ['ENSG00000132849|ENST00000642238|PATJ', 'nc|ENSG00000132849|Q8NI35|PATJ', 'nc|ENSG00000132849|Q8NI35-4|PATJ', 'ENST00000459752.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-3|PATJ', 'ENST00000484562.5_1_1:62228564-62579919:+|nuORF', 'nc|ENSG00000132849|Q8NI35-2|PATJ', 'nc|ENSG00000132849|Q8NI35-5|PATJ'] 80935 22700 PMPMKRGP True H1975_Epitope_Rep1 912.4673638144 912.4662699358599 94.425 2 -2.540191779814006 0.45985231082629546 1.0 ['RBMXL2|p.G376Efs*4|1|0.33|ENSG00000170748|chr11:7090246-7090246|G/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2'] 91123 20629 RLNIAIFF True NCI_RA007_Epitope_Rep5 992.58073669052 992.57962993586 86.294 2 -2.540577724352075 0.45985231082629546 1.0 ['ENSG00000170417|ENST00000412401|TMEM182'] 113959 17496 TRKDLLQQ True NCI_RA007_Epitope_Rep3 1000.56654317836 1000.56544993586 76.769 2 -2.5407833662970876 0.4598531627304942 1.0 ['ENST00000481421.1_1_3:156431675-156432128:-|nuORF'] 52481 24525 KPLKVCLQI True H1975_Epitope_Rep1 1040.64162269492 1040.64052993586 101.64 2 -2.540930904148158 0.4598531627304942 1.0 ['ENST00000488923.1_1_2:242186148-242186740:-|nuORF'] 29834 14679 FVVLIVPM True H1975_Epitope_Rep3 916.54559705176 916.54448993586 61.832 2 -2.5415755256084824 0.45985401459854014 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 121959 11450 VGPSQPEH True NCI_RA007_Epitope_Rep5 849.39808087093 849.39753496793 50.691 1 -2.5417878069919144 0.45985401459854014 1.0 ['chr3:121938445-121939349|375|11.28|0.04|8.23|+|2|TE_info:L1PA3,L1PA3_dup2051,L1,LINE,donor,-,121932761,121938445|None,SLC15A2|104'] 32580 24943 GHAGESHV True PC9_epitope_Rep1 792.35146503168 792.35036993586 100.86 2 -2.5421620799934685 0.4598557182261829 1.0 ['ENST00000362074.7_1_1:145273244-145273415:+|nuORF'] 117470 15010 VAEAIPRI True NCI_RA007_Epitope_Rep5 867.5178020807899 867.51670993586 64.405 2 -2.542177640054849 0.4598557182261829 1.0 ['nc|ENSG00000134160|Q7Z4N2-2|TRPM1', 'TRPM1|p.S1552Vfs*9|1|0.19|ENSG00000134160|chr15:31001980-31001980|T/-|frameshift_variant', 'nc|ENSG00000134160|Q7Z4N2-3|TRPM1', 'nc|ENSG00000134160|Q7Z4N2|TRPM1', 'ENSG00000134160|ENST00000256552|TRPM1', 'nc|ENSG00000134160|Q7Z4N2-5|TRPM1'] 34538 25072 GQEPIVKKG True NCI_RA007_Epitope_Rep5 954.5498304850598 954.54872993586 103.94 2 -2.542229237143736 0.4598557182261829 1.0 ['nc|ENSG00000143486|P41214-2|EIF2D', 'ENSG00000143486|ENST00000271764|EIF2D'] 140772 14905 YYRQGCAS True NCI_RA007_Epitope_Rep3 946.3967009719398 946.39560993586 66.061 2 -2.5424975487892696 0.4598557182261829 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 32535 14454 GGSHMGGG True NCI_RA007_Epitope_Rep2 658.2493084622599 658.24875496793 60.885 1 -2.542804752584749 0.45987205737261433 1.0 ['nc|ENSG00000077150|Q00653-4|NFKB2', 'ENSG00000077150|ENST00000661543|NFKB2', 'ENST00000467116.5_1_10:104155716-104158713:+|nuORF', 'nc|ENSG00000077150|Q00653-3|NFKB2', 'ENST00000336486.5_1_10:104157832-104159780:+|nuORF'] 38361 21815 HGDTALHA True NCI_RA007_Epitope_Rep3 820.3827651599601 820.38166993586 94.775 2 -2.5444337909678714 0.4599064359744131 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 65819 21376 LSKGGWAP True NCI_RA007_Epitope_Rep2 814.43373810366 814.43264993586 88.452 2 -2.5445551222366274 0.4599064359744131 1.0 ['ENST00000308713.9_3_16:29910520-29910610:-|nuORF'] 117939 9377 VARCTHMG True PC9_epitope_Rep3 873.3949271501299 873.39382993586 41.007 2 -2.5447709707619324 0.4599064359744131 1.0 ['ENST00000372583.5_1_1:42049420-42049822:-|nuORF'] 133951 24753 WPGEKYEL True H1975_Epitope_Rep3 1020.4916469025999 1020.49054993586 102.95 2 -2.5450679079988126 0.4599064359744131 1.0 ['RCAN1|p.G194W|1|0.29|ENSG00000159200|chr21:34521505-34521505|C/A|missense_variant'] 136957 22969 YKIKYFGF True NCI_RA007_Epitope_Rep5 1064.56950330048 1064.56840993586 95.584 2 -2.54595013063791 0.4599064359744131 1.0 ['ENSG00000062650|ENST00000298767|WAPL', 'nc|ENSG00000062650|Q7Z5K2-2|WAPL', 'nc|ENSG00000062650|Q7Z5K2-3|WAPL'] 12427 24902 DKKEILKK True NCI_RA007_Epitope_Rep3 1000.6280808057599 1000.62698993586 107.66 2 -2.5460135171220992 0.4599064359744131 1.0 ['nc|ENSG00000048649|Q96T23-2|RSF1', 'ENSG00000048649|ENST00000308488|RSF1', 'nc|ENSG00000048649|Q96T23-3|RSF1'] 79207 18378 PGFPSGVH True NCI_RA007_Epitope_Rep4 796.3867879112399 796.38568993586 79.511 2 -2.546537266780534 0.45993105277114826 1.0 ['nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS', 'ENST00000464624.6_1_20:57428320-57466719:+|nuORF', 'nc|ENSG00000087460|Q5JWF2-3|GNAS'] 121399 21793 VGHSAGHP True PC9_epitope_Rep6 760.36163579256 760.36052993586 96.719 2 -2.5465928815209913 0.45993105277114826 1.0 ['ENSG00000177468|ENST00000367734|OLIG3'] 52362 17391 KPGERKKT True NCI_RA007_Epitope_Rep5 942.5610638750999 942.55996993586 73.675 2 -2.546618640306947 0.45993105277114826 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 69810 23757 LWVMRVQK True PC9_epitope_Rep2 1058.60590589254 1058.6048099358602 96.854 2 -2.547302121684913 0.45993105277114826 1.0 ['SLAMF9|p.I257M|1|0.13|ENSG00000162723|chr1:159951760-159951760|G/C|missense_variant'] 9717 17470 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 76.647 2 -2.5481570051665865 0.45993105277114826 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 52738 23392 KQLKKKSEEVY True PC9_epitope_Rep6 1378.78201524786 1378.78090993586 103.08 2 -2.548555986173593 0.45993105277114826 1.0 ['nc|ENSG00000122483|Q5T9S5-2|CCDC18', 'nc|ENSG00000122483|Q5T9S5|CCDC18', 'ENSG00000122483|ENST00000690025|CCDC18', 'ENST00000421014.2_1_1:93687225-93704878:+|nuORF'] 9723 19323 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 83.565 2 -2.548557608109103 0.45993105277114826 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 132668 22259 VYREKAKK True NCI_RA007_Epitope_Rep3 1020.6080140675198 1020.60690993586 96.728 2 -2.548813284964459 0.45993105277114826 1.0 ['ENSG00000159593|ENST00000290810|NAE1', 'nc|ENSG00000159593|Q13564-4|NAE1', 'nc|ENSG00000159593|Q13564-2|NAE1', 'nc|ENSG00000159593|Q13564-3|NAE1'] 9712 20349 AYIPSHSD True H1975_Epitope_Rep1 888.39774651776 888.39664993586 84.635 2 -2.549287753557423 0.4599473885188171 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 3409 10997 AGKKHGGL True NCI_RA007_Epitope_Rep2 766.4449714936998 766.4444249679301 47.385 1 -2.54951140956111 0.4599482381891852 1.0 ['ENSG00000188910|ENST00000373366|GJB3'] 95416 24020 SAKKPCPV True PC9_epitope_Rep3 828.4527592960799 828.45166993586 97.679 2 -2.549756635430703 0.4599482381891852 1.0 ['ENSG00000146858|ENST00000275766|ZC3HAV1L'] 91124 20714 RLNIAIFF True NCI_RA007_Epitope_Rep5 992.58073669052 992.57962993586 86.642 2 -2.550175568625841 0.45995396641882075 1.0 ['ENSG00000170417|ENST00000412401|TMEM182'] 52541 18961 KPRKHDSGAAD True NCI_RA007_Epitope_Rep4 1180.5948831845199 1180.59378993586 82.009 2 -2.5506978326762653 0.4599703012303776 1.0 ['ENSG00000242028|ENST00000442995|HYPK', 'ENST00000497142.1_1_15:44092844-44093913:+|nuORF', 'nc|ENSG00000242028|Q9NX55-3|HYPK', 'ENST00000498605.1_1_15:44092640-44093386:+|nuORF'] 140782 21111 YYRQGCAS True PC9_epitope_Rep5 946.3967009719398 946.39560993586 86.269 2 -2.551016063155006 0.4599711503786513 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 46973 15097 IVNRKEHK True NCI_RA007_Epitope_Rep5 1022.59851201298 1022.5974099358599 64.738 2 -2.5512011154717245 0.4599711503786513 1.0 ['DAPP1-SLC4A4|1|fusion', 'DAPP1-SLC4A4|2|fusion', 'nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'SLC4A4|p.K1022Rfs*37|1|0.14|ENSG00000080493|chr4:71560215-71560215|G/-|frameshift_variant', 'ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4'] 79206 19062 PGFPSGVH True NCI_RA007_Epitope_Rep3 796.3867879112399 796.38568993586 83.272 2 -2.551366290687385 0.45997687812224897 1.0 ['nc|ENSG00000087460|Q5JWF2|GNAS', 'nc|ENSG00000087460|Q5JWF2-2|GNAS', 'ENST00000464624.6_1_20:57428320-57466719:+|nuORF', 'nc|ENSG00000087460|Q5JWF2-3|GNAS'] 78385 20754 PAVFSGHD True NCI_RA007_Epitope_Rep3 828.3766171503601 828.37552993586 90.39 2 -2.551638959214875 0.4599932119977939 1.0 ['nc|ENSG00000184465|A2RRH5|WDR27', 'nc|ENSG00000184465|A2RRH5-2|WDR27', 'ENSG00000184465|ENST00000448612|WDR27', 'ENST00000546525.5_1_6:170034618-170062491:-|nuORF'] 104442 17832 SSLKRKQP True H1975_Epitope_Rep2 942.5610638750998 942.55996993586 73.912 2 -2.552106295159941 0.4599989393859044 1.0 ['nc|ENSG00000186575|P35240-2|NF2', 'nc|ENSG00000186575|P35240-4|NF2', 'nc|ENSG00000186575|P35240-6|NF2', 'nc|ENSG00000186575|P35240-5|NF2', 'nc|ENSG00000186575|P35240-8|NF2', 'nc|ENSG00000186575|P35240-3|NF2', 'ENSG00000186575|ENST00000338641|NF2', 'nc|ENSG00000186575|P35240-9|NF2', 'nc|ENSG00000186575|P35240-10|NF2', 'nc|ENSG00000186575|P35240-7|NF2'] 121640 8900 VGLGDSKK True H1975_Epitope_Rep2 802.45486747106 802.45376993586 39.201 2 -2.552724876098838 0.4600226956973624 1.0 ['ENST00000563181.1_1_16:2030938-2031410:-|nuORF', 'ENST00000354249.8_2_16:2030177-2031410:-|nuORF', 'ENST00000356120.8_2_16:2030177-2031410:-|nuORF'] 9725 21105 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 91.505 2 -2.552805483147162 0.4600226956973624 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 49165 17167 KGPARQAK True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 72.805 2 -2.552818125922395 0.4600226956973624 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 110394 24538 TILRTWPPW True NCI_RA007_Epitope_Rep5 1168.6393141958 1168.63820993586 101.86 2 -2.553052418283235 0.4600226956973624 1.0 ['ENST00000588422.3_1_19:39109887-39111017:+|nuORF'] 103963 16065 SRQPSLLH True NCI_RA007_Epitope_Rep3 936.5141136826799 936.5130099358599 70.878 2 -2.553459577275098 0.4600226956973624 1.0 ['nc|ENSG00000013619|Q13495-4|MAMLD1', 'ENSG00000013619|ENST00000370401|MAMLD1', 'nc|ENSG00000013619|Q13495-3|MAMLD1'] 112114 17280 TLTSKVRR True NCI_RA007_Epitope_Rep5 959.5876129761099 959.58650993586 73.24 2 -2.5535855640537983 0.4600226956973624 1.0 ['ENSG00000222018|ENST00000410005|C21orf140'] 115053 7331 TTRLYARE True PC9_epitope_Rep3 1008.5352430500799 1008.53414993586 33.208 2 -2.5549009977432395 0.460035844194407 1.0 ['chr3:119190319-119191009|266|64.64|0.84|6.27|+|2|UPK1B,None|1'] 99294 8607 SLDHSVKGK True PC9_epitope_Rep1 969.5243440132099 969.52324993586 37.943 2 -2.5550873705734864 0.460035844194407 1.0 ['TRAT1|p.R121C|1|0.15|ENSG00000163519|chr3:108853677-108853677|C/T|missense_variant', 'ENSG00000163519|ENST00000295756|TRAT1'] 64275 23672 LQLKKRLRWY True PC9_epitope_Rep5 1402.85612367798 1402.8544649037901 96.033 3 -2.5555464338020157 0.460035844194407 1.0 ['ENSG00000127804|ENST00000263092|METTL16', 'ENST00000574752.5_1_17:2340122-2367575:-|nuORF'] 107457 25511 SYWISWVRQM True H1975_Epitope_Rep1 1354.6492272565 1354.6481299358602 105.73 2 -2.555757070652096 0.460035844194407 1.0 ['nc|ENSG00000282651|A0A0J9YXX1|IGHV5-10-1'] 122184 8601 VGRLFQLG True NCI_RA007_Epitope_Rep3 888.5181364339599 888.51702993586 40.908 2 -2.5559485310010577 0.460035844194407 1.0 ['HABP4|p.N402Tfs*95|1|0.27|ENSG00000130956|chr9:96489995-96489995|C/-|frameshift_variant'] 122521 14134 VGSSVKAN True NCI_RA007_Epitope_Rep5 760.40791727864 760.4073649679301 61.056 1 -2.5566089224755046 0.460035844194407 1.0 ['ENST00000466239.5_1_6:32133908-32133956:+|nuORF', 'ENST00000421600.2_3_6:32132434-32133956:+|nuORF', 'ENST00000585246.5_1_6:32123472-32133959:+|nuORF'] 111940 22560 TLSARATA True PC9_epitope_Rep1 789.43446637965 789.43336993586 91.581 2 -2.557840444621551 0.46005217501961865 1.0 ['nc|ENSG00000065150|O00410-2|IPO5', 'ENSG00000065150|ENST00000651721|IPO5', 'nc|ENSG00000065150|O00410-3|IPO5'] 112911 27065 TPQKQSNS True PC9_epitope_Rep3 888.4301092751999 888.42900993586 111.35 2 -2.5582105888565523 0.46005302226935313 1.0 ['ENSG00000179008|ENST00000321731|C14orf39'] 140781 21056 YYRQGCAS True PC9_epitope_Rep3 946.3967009719398 946.39560993586 86.273 2 -2.558474051938863 0.46005302226935313 1.0 ['ENSG00000092445|ENST00000263798|TYRO3'] 30042 10374 FYIYHLYWWEF True H1975_Epitope_Rep1 1665.7656369077297 1665.76452993586 44.852 2 -2.560234488999534 0.46007104607390914 1.0 ['ENSG00000132017|ENST00000254337|DCAF15'] 92295 4012 RQLFWAEP True NCI_RA007_Epitope_Rep1 1045.5345147740898 1045.5334099358602 19.651 2 -2.5603371649674553 0.46007104607390914 1.0 ['ENST00000392563.5_1_17:73314377-73314581:-|nuORF'] 9711 20174 AYIPSHSD True H1975_Epitope_Rep1 888.39774651776 888.39664993586 83.948 2 -2.5612054699259996 0.46007104607390914 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 52360 17271 KPGERKKT True NCI_RA007_Epitope_Rep4 942.5610638750999 942.55996993586 74.788 2 -2.561759557446102 0.46007104607390914 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 136011 22943 YFLLALAA True PC9_epitope_Rep3 880.5058404147599 880.50474993586 93.516 2 -2.5620624838641137 0.46007104607390914 1.0 ['nc|ENSG00000169247|Q8TF17-5|SH3TC2', 'ENSG00000169247|ENST00000515425|SH3TC2', 'ENST00000510779.1_1_5:148384276-148408226:-|nuORF', 'nc|ENSG00000169247|Q8TF17-2|SH3TC2'] 121897 10119 VGPHAAVP True NCI_RA007_Epitope_Rep1 746.40752335582 746.4069749679301 43.371 1 -2.563231102694563 0.46007189286055117 1.0 ['ENSG00000236446|ENST00000371311|CT47B1'] 92963 23451 RRPVDPRRR True PC9_epitope_Rep4 1206.71700443622 1206.71590993586 98.49 2 -2.563462812277773 0.46007189286055117 1.0 ['KIAA0907-ARHGEF2|1|fusion', 'KIAA0907-ARHGEF2|2|fusion', 'KIAA0907-ARHGEF2|3|fusion', 'KIAA0907-ARHGEF2|4|fusion', 'nc|ENSG00000116584|Q92974-3|ARHGEF2', 'nc|ENSG00000116584|Q92974-2|ARHGEF2', 'ENSG00000116584|ENST00000361247|ARHGEF2'] 9724 20864 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 90.405 2 -2.5655128587255414 0.46009479276012344 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 29841 14883 FVVLIVPM True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 64.71 2 -2.5661563944963404 0.46009479276012344 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 107886 15584 TATHNTSP True NCI_RA007_Epitope_Rep1 827.37734542635 827.3767949679301 64.706 1 -2.566691431282592 0.46009479276012344 1.0 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2', 'nc|ENSG00000163125|Q5VT52-2|RPRD2', 'ENSG00000163125|ENST00000369068|RPRD2'] 49221 21748 KGRCLGSP True NCI_RA007_Epitope_Rep5 816.4276071773999 816.4265099358599 90.763 2 -2.566747270853981 0.46009479276012344 1.0 ['ENST00000369153.2_1_1:149871204-149871542:+|nuORF'] 52888 22414 KRFVGSLG True NCI_RA007_Epitope_Rep5 862.5024863698198 862.50138993586 93.382 2 -2.5669489588209378 0.46010051743150393 1.0 ['ENSG00000104643|ENST00000221086|MTMR9'] 26500 10729 FISLPPNL True NCI_RA007_Epitope_Rep2 899.51165407119 899.51054993586 46.333 2 -2.567563463397068 0.4601062419814872 1.0 ['ENSG00000214021|ENST00000685419|TTLL3', 'nc|ENSG00000214021|Q9Y4R7-5|TTLL3', 'nc|ENSG00000214021|Q9Y4R7|TTLL3'] 52365 22574 KPGERKKT True PC9_epitope_Rep2 942.5610638750999 942.55996993586 92.329 2 -2.568171322331237 0.4601070879499549 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 80291 24319 PLEIVFGM True PC9_epitope_Rep4 904.47282603432 904.47172993586 102.02 2 -2.5687237200513118 0.4601070879499549 1.0 ['ENSG00000107371|ENST00000327304|EXOSC3'] 30380 5251 GAERNPVI True NCI_RA007_Epitope_Rep4 854.4610154806599 854.45990993586 26.74 2 -2.5693791866050715 0.4601234149030917 1.0 ['MUC16|p.S10580N|1|0.23|ENSG00000181143|chr19:8939216-8939216|C/T|missense_variant'] 47987 15765 KAGRAGHK True H1975_Epitope_Rep2 823.47766860431 823.47656993586 65.818 2 -2.569865628257937 0.46015606777073303 1.0 ['ENSG00000105671|ENST00000247003|DDX49'] 68558 12804 LTWPPGSP True H1975_Epitope_Rep2 853.4334037504899 853.4328549679301 54.358 1 -2.5698785630654633 0.46015606777073303 1.0 ['ENST00000422370.2_1_19:45647868-45648611:+|nuORF'] 87987 22701 QVRGPLHLR True PC9_epitope_Rep4 1074.6410455312998 1074.6399499358602 95.549 2 -2.5713326071901292 0.46015691263782865 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 105662 21731 SVFSGFLLFPD True NCI_RA007_Epitope_Rep4 1227.6175756917098 1227.61646993586 94.216 2 -2.5714487761531557 0.46015691263782865 1.0 ['ENSG00000159189|ENST00000374640|C1QC'] 134984 20992 YAGFHVAL True NCI_RA007_Epitope_Rep5 876.4493881678 876.44828993586 87.755 2 -2.571786921409668 0.4601577574690952 1.0 ['ENST00000504674.1_1_5:39719945-39720791:-|nuORF'] 8614 7682 AVAKHQWVHR True PC9_epitope_Rep4 1230.67340828874 1230.67177490379 36.929 3 -2.57188895384706 0.4601577574690952 1.0 ['ENSG00000169951|ENST00000395091|ZNF764', 'nc|ENSG00000169951|Q96H86|ZNF764'] 123310 20404 VHSTHAPT True NCI_RA007_Epitope_Rep3 848.41406528824 848.41296993586 88.906 2 -2.5727235632952636 0.46017408267336707 1.0 ['nc|ENSG00000173320|Q9P2F5-2|STOX2', 'ENSG00000173320|ENST00000308497|STOX2'] 104034 10906 SRSRYYRQRQR True H1975_Epitope_Rep3 1554.8239886858998 1554.82288993586 47.037 2 -2.574138182735185 0.4602181771921083 1.0 ['ENSG00000175646|ENST00000312511|PRM1'] 52377 23363 KPGFIKVVR True PC9_epitope_Rep6 1042.66513502082 1042.66402993586 102.97 2 -2.57467163330677 0.4602181771921083 1.0 ['ENSG00000110328|ENST00000227756|GALNT18'] 74525 23350 NKVNPIFHH True PC9_epitope_Rep6 1104.58286194884 1104.5817699358602 102.92 2 -2.57489008002543 0.4602181771921083 1.0 ['ENSG00000188766|ENST00000691638|SPRED3', 'nc|ENSG00000188766|Q2MJR0-2|SPRED3'] 139573 23748 YTNQLLQAM True PC9_epitope_Rep4 1080.5273807883198 1080.5262899358602 99.724 2 -2.575091170781111 0.4602181771921083 1.0 ['ENST00000547809.5_1_12:105570964-105626916:-|nuORF', 'ENSG00000136044|ENST00000258530|APPL2', 'nc|ENSG00000136044|Q8NEU8-3|APPL2'] 94240 22888 RWRLHSIQK True PC9_epitope_Rep2 1222.7047084170201 1222.7036099358602 93.538 2 -2.576140530800948 0.46026967435549526 1.0 ['ENST00000482389.1_1_7:96318216-96318261:-|nuORF'] 101364 23610 SMKVKASS True H1975_Epitope_Rep1 836.4425885352 836.44203496793 98.052 1 -2.5764330434694607 0.46026967435549526 1.0 ['ENST00000418170.5_1_22:35660034-35689641:+|nuORF', 'ENSG00000100281|ENST00000216106|HMGXB4'] 9710 19837 AYIPSHSD True H1975_Epitope_Rep1 888.39774651776 888.39664993586 82.551 2 -2.5766485596299433 0.46026967435549526 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 84331 26055 QFPKNYIFFS True NCI_RA007_Epitope_Rep4 1289.6444591458896 1289.64280490379 114.25 3 -2.576798016903453 0.46026967435549526 1.0 ['ENST00000420886.6_1_12:123780337-123780400:-|nuORF'] 39038 23387 HKPLLIDM True PC9_epitope_Rep1 965.53682327321 965.53572993586 94.739 2 -2.577399829079661 0.46026967435549526 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 71253 25196 MGFLLNFLRKL True PC9_epitope_Rep5 1350.7845985305 1350.7835099358601 102.06 2 -2.5775258866721593 0.46026967435549526 1.0 ['ENST00000479945.1_1_3:58415887-58415938:-|nuORF'] 95751 15652 SCKEFADYFA True PC9_epitope_Rep4 1179.4906609264297 1179.4895699358601 68.132 2 -2.5775501522299433 0.46026967435549526 1.0 ['nc|ENSG00000156414|Q8NDG6-2|TDRD9', 'ENSG00000156414|ENST00000409874|TDRD9'] 59347 22247 LGKKPYIC True PC9_epitope_Rep1 920.5153595526399 920.5148149679301 90.39 1 -2.5775999757524013 0.46026967435549526 1.0 ['nc|ENSG00000088876|Q6P1L6-2|ZNF343', 'ENSG00000088876|ENST00000278772|ZNF343'] 71897 14059 MPPPGVVK True PC9_epitope_Rep3 823.46259570379 823.46148993586 59.167 2 -2.5777888382332863 0.46026967435549526 1.0 ['nc|ENSG00000110042|Q9Y2E6-2|DTX4', 'ENSG00000110042|ENST00000227451|DTX4'] 30486 11725 GAGPPPQF True NCI_RA007_Epitope_Rep2 769.3758888743699 769.37534496793 50.204 1 -2.578256978138689 0.4603071965400638 1.0 ['ENST00000418132.7_1_17:38296747-38323177:+|nuORF', 'ENSG00000108349|ENST00000264645|CASC3'] 95622 24833 SATVKVQG True PC9_epitope_Rep3 788.4392174069199 788.43812993586 100.9 2 -2.5783513653482766 0.46030803803305104 1.0 ['ECT2-KALRN|4|fusion', 'ECT2-KALRN|2|fusion', 'ENSG00000160145|ENST00000682506|KALRN', 'nc|ENSG00000160145|O60229-6|KALRN', 'nc|ENSG00000160145|O60229-4|KALRN', 'nc|ENSG00000160145|O60229|KALRN'] 48996 19683 KFGASRAA True H1975_Epitope_Rep2 806.43988611326 806.43878993586 81.673 2 -2.578449779772324 0.46030803803305104 1.0 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581108.5_1_17:80207265-80210400:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 59764 5032 LGYLIIYV True PC9_epitope_Rep5 952.5633552908799 952.56224993586 24.386 2 -2.5785984833281503 0.4603088794903594 1.0 ['nc|ENSG00000090975|Q9BZ72-3|PITPNM2', 'nc|ENSG00000090975|Q9BZ72-2|PITPNM2', 'ENSG00000090975|ENST00000320201|PITPNM2'] 71262 14876 MGLAGGRI True H1975_Epitope_Rep2 773.42179352097 773.42068993586 62.372 2 -2.579464602607352 0.4603088794903594 1.0 ['nc|ENSG00000068024|P56524-2|HDAC4', 'HDAC4|p.W1028Cfs*12|1|0.2|ENSG00000068024|chr2:239053582-239053591|CAGGCAGCGC/-|frameshift_variant', 'nc|ENSG00000068024|P56524|HDAC4', 'ENSG00000068024|ENST00000543185|HDAC4', 'ENST00000494800.1_1_2:239977015-240002822:-|nuORF'] 36029 7339 GVDPGPKQ True NCI_RA007_Epitope_Rep4 796.4079172786401 796.4073649679301 34.867 1 -2.580129830307041 0.46030972091199135 1.0 ['ENST00000540992.1_1_12:16666501-16667302:+|nuORF'] 79917 25218 PIPHLVLT True H1975_Epitope_Rep2 888.54328855264 888.54274496793 103.6 1 -2.5803574992021967 0.46030972091199135 1.0 ['ENST00000354124.7_2_17:77045413-77045737:+|nuORF'] 125021 23661 VLPASHRR True H1975_Epitope_Rep3 934.5460825173 934.54498993586 98.694 2 -2.5811524571257674 0.46032116169378345 1.0 ['ENSG00000142621|ENST00000688493|FHAD1', 'nc|ENSG00000142621|B1AJZ9-4|FHAD1', 'nc|ENSG00000142621|B1AJZ9|FHAD1', 'nc|ENSG00000142621|B1AJZ9-3|FHAD1'] 68764 24020 LVDMAKKL True PC9_epitope_Rep2 916.54157430048 916.54046993586 97.889 2 -2.581436681773624 0.46032116169378345 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 44811 23154 IPVFFAWR True PC9_epitope_Rep6 1034.5701720068198 1034.5690699358602 102.16 2 -2.582491337117822 0.46033192734055406 1.0 ['ENST00000510784.8_1_6:24875969-25042131:-|nuORF'] 135052 13699 YAKHTKQSL True PC9_epitope_Rep4 1074.5821932425 1074.58108993586 60.581 2 -2.582657771361958 0.46033192734055406 1.0 ['ENSG00000125656|ENST00000245816|CLPP'] 126223 17096 VPGTRSSSHV True PC9_epitope_Rep4 1025.52540664237 1025.5243099358602 73.759 2 -2.582726668768946 0.46033192734055406 1.0 ['ENST00000433540.5_1_12:105325484-105351981:-|nuORF'] 62011 16236 LLLSDDKN True NCI_RA007_Epitope_Rep5 916.4865615221601 916.48546993586 69.2 2 -2.583852673055635 0.46033192734055406 1.0 ['ENSG00000164309|ENST00000446378|CMYA5', 'CMYA5|p.P3712Lfs*18|1|0.42|ENSG00000164309|chr5:79758776-79758776|C/-|frameshift_variant'] 3656 14046 AGQVAAANK True NCI_RA007_Epitope_Rep3 828.44536541652 828.44426993586 62.556 2 -2.5841454083383315 0.46033192734055406 1.0 ['ENSG00000105372|ENST00000598742|RPS19'] 124498 20240 VLFGPPGI True H1975_Epitope_Rep2 798.4639756027799 798.46286993586 83.877 2 -2.5841606253347664 0.46033192734055406 1.0 ['NWD1|p.G1273Afs*12|2|0.44|ENSG00000188039|chr19:16807665-16807665|G/-|frameshift_variant', 'ENSG00000188039|ENST00000524140|NWD1', 'ENST00000438489.6_1_19:16849058-16926137:+|nuORF', 'nc|ENSG00000188039|Q149M9|NWD1'] 38238 8096 HEYKGCHLAR True PC9_epitope_Rep1 1212.58221032584 1212.58057490379 35.967 3 -2.584478447916349 0.46033192734055406 1.0 ['CON__Q2HJF0'] 93111 23758 RRRQKGKKEIE True PC9_epitope_Rep2 1426.84807817542 1426.8469899358602 96.858 2 -2.584597905270142 0.46033192734055406 1.0 ['ENST00000381813.4_1_2:10197463-10197871:-|nuORF'] 71511 20640 MKPAIAPK True PC9_epitope_Rep6 854.5047948689399 854.50368993586 92.126 2 -2.5846094329279095 0.46033192734055406 1.0 ['nc|ENSG00000180263|Q6ZV73-2|FGD6', 'ENSG00000180263|ENST00000343958|FGD6'] 83347 15728 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 67.216 2 -2.58475104523215 0.46033192734055406 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 44641 25055 IPKKKYTRR True PC9_epitope_Rep1 1188.74551059984 1188.7444099358602 101.29 2 -2.584973697343994 0.46033192734055406 1.0 ['ENSG00000125812|ENST00000338121|GZF1'] 51902 23238 KKRRKKKKSKG True PC9_epitope_Rep5 1370.9310199537397 1370.9299299358602 94.368 2 -2.585251339619352 0.46033192734055406 1.0 ['nc|ENSG00000111142|P50579-3|METAP2', 'nc|ENSG00000111142|P50579-2|METAP2', 'ENSG00000111142|ENST00000323666|METAP2', 'METAP2|p.Q335Hfs*13|2|0.26|ENSG00000111142|chr12:95511934-95511934|A/-|frameshift_variant'] 112558 22203 TPAHHPPG True PC9_epitope_Rep6 812.3929359208399 812.39182993586 98.356 2 -2.5853103541009816 0.46033192734055406 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 121765 10541 VGMATMILTLL True PC9_epitope_Rep2 1161.6501387732899 1161.6484949037902 45.866 3 -2.585727693571642 0.46033764664737864 1.0 ['ENSG00000197386|ENST00000355072|HTT', 'ENST00000510626.5_1_4:3131970-3189635:+|nuORF'] 48997 20281 KFGASRAA True H1975_Epitope_Rep2 806.43988611326 806.43878993586 84.048 2 -2.5876324399140525 0.46040291215836715 1.0 ['nc|ENSG00000141551|P48730-2|CSNK1D', 'ENSG00000141551|ENST00000314028|CSNK1D', 'ENST00000584377.5_1_17:80203885-80211156:-|nuORF', 'ENST00000581108.5_1_17:80207265-80210400:-|nuORF', 'ENST00000581241.5_1_17:80206597-80211051:-|nuORF'] 68755 12937 LVDMAKKL True NCI_RA007_Epitope_Rep4 916.54157430048 916.54046993586 56.852 2 -2.5878695607406383 0.46040291215836715 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 126570 24581 VPPLSTSL True PC9_epitope_Rep4 812.4643695256001 812.46326993586 103.04 2 -2.5879401096074908 0.46040291215836715 1.0 ['ENSG00000135547|ENST00000368364|HEY2'] 121142 21238 VGGGKSNP True PC9_epitope_Rep5 714.36605246666 714.3655049679301 86.742 1 -2.588047312236239 0.46040291215836715 1.0 ['FLI1|p.E96K|1|0.31|ENSG00000151702|chr11:128768173-128768173|G/A|missense_variant'] 4354 24894 AIPFIRPLR True NCI_RA007_Epitope_Rep1 1081.67603405769 1081.67492993586 103.04 2 -2.588446197663703 0.46044042219490483 1.0 ['ENST00000512751.5_1_5:112312677-112343644:+|nuORF', 'ENST00000508359.1_1_5:112336867-112343781:+|nuORF', 'nc|ENSG00000172795|Q8IU60-2|DCP2', 'ENSG00000172795|ENST00000389063|DCP2'] 77066 25022 NWGGLGLL True PC9_epitope_Rep1 828.4493881678 828.44828993586 101.17 2 -2.5890217135017677 0.46044613998834316 1.0 ['ENST00000238379.9_1_9:116136341-116136734:-|nuORF'] 19255 24861 ELLIKTKKEK True PC9_epitope_Rep2 1228.77547331544 1228.77436993586 101.3 2 -2.590325383751372 0.4605048428459403 1.0 ['ENSG00000109111|ENST00000314616|SUPT6H', 'nc|ENSG00000109111|Q7KZ85-2|SUPT6H'] 53331 17805 KTPKKKMKM True NCI_RA007_Epitope_Rep3 1118.66679189694 1118.6656899358602 78.074 2 -2.5909063400070855 0.46052115676030814 1.0 ['ENST00000491428.1_1_1:218458703-218475928:+|nuORF', 'ENSG00000067533|ENST00000366932|RRP15'] 37632 15706 HAASKALR True NCI_RA007_Epitope_Rep5 852.49298431528 852.49188993586 67.131 2 -2.5912185708272713 0.46053259015142683 1.0 ['nc|ENSG00000152223|Q9HCE0-2|EPG5', 'ENSG00000152223|ENST00000282041|EPG5', 'ENST00000587974.1_1_18:43487913-43547205:-|nuORF', 'ENST00000585906.5_1_18:43437816-43497657:-|nuORF'] 59986 15425 LHPRHQRIL True PC9_epitope_Rep3 1168.69414373332 1168.6924949037902 64.487 3 -2.59143679886596 0.46053259015142683 1.0 ['ENSG00000229474|ENST00000682850|PATL2', 'ENST00000560780.1_2_15:44964301-44966556:-|nuORF'] 80025 21825 PKGHGGAR True PC9_epitope_Rep6 778.41981937502 778.41872993586 96.851 2 -2.5920345455655864 0.4605334265823187 1.0 ['ENST00000427323.5_1_3:38388271-38390057:+|nuORF'] 58403 25420 LEVQLKPKHQ True PC9_epitope_Rep3 1218.70845638478 1218.70734993586 103.22 2 -2.5920813080398393 0.4605334265823187 1.0 ['ENSG00000126391|ENST00000317568|FRMD8'] 10543 23204 CPPPCSSV True PC9_epitope_Rep6 788.3196965212001 788.31858993586 102.35 2 -2.5925914619625656 0.46055712726617715 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 48627 23525 KEIPHLVAV True H1975_Epitope_Rep2 1004.6018660579199 1004.60076993586 96.971 2 -2.5938627263125515 0.46055712726617715 1.0 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK'] 71508 22464 MKPAIAPK True PC9_epitope_Rep3 854.5047948689399 854.50368993586 91.684 2 -2.593922184242617 0.46055712726617715 1.0 ['nc|ENSG00000180263|Q6ZV73-2|FGD6', 'ENSG00000180263|ENST00000343958|FGD6'] 131528 19475 VVVGNKAL True PC9_epitope_Rep6 798.49633836022 798.49524993586 87.574 2 -2.5941269658012027 0.46055712726617715 1.0 ['ENSG00000101407|ENST00000373447|TTI1'] 52370 22368 KPGERKKT True PC9_epitope_Rep5 942.5610638750999 942.55996993586 91.05 2 -2.5943776112317884 0.46055712726617715 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 68756 17032 LVDMAKKL True NCI_RA007_Epitope_Rep4 916.54157430048 916.54046993586 73.798 2 -2.5945650481140676 0.46055712726617715 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 121790 14130 VGMPGSGP True PC9_epitope_Rep2 700.32141077336 700.3208649679301 59.622 1 -2.5959250023035274 0.46055796310619945 1.0 ['nc|ENSG00000101811|P33240-2|CSTF2', 'ENSG00000101811|ENST00000372972|CSTF2'] 44005 23575 ILHYDETY True H1975_Epitope_Rep2 1052.4814761417201 1052.4803699358602 97.17 2 -2.596444557046693 0.46055796310619945 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 137914 4656 YPPQYLILKLE True PC9_epitope_Rep1 1375.7751389622697 1375.7734949037902 22.778 3 -2.597171370818436 0.46057106531758224 1.0 ['ENST00000494785.5_1_7:131012658-131163543:+|nuORF', 'ENSG00000128585|ENST00000352689|MKLN1'] 9719 18471 AYIPSHSD True NCI_RA007_Epitope_Rep3 888.39774651776 888.39664993586 80.835 2 -2.5978697523334713 0.46057106531758224 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 131338 12424 VVRPEEIP True PC9_epitope_Rep3 937.5232813840499 937.52218993586 52.815 2 -2.5979678734128466 0.46057106531758224 1.0 ['ENSG00000114857|ENST00000232978|NKTR', 'ENST00000508351.5_1_3:42675051-42676859:+|nuORF'] 79382 15645 PGLKAATP True H1975_Epitope_Rep2 753.43848913093 753.43738993586 65.334 2 -2.5983398166115097 0.46057106531758224 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 68757 18203 LVDMAKKL True NCI_RA007_Epitope_Rep4 916.54157430048 916.54046993586 78.771 2 -2.5984005612628 0.46057106531758224 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 79767 17403 PHVFTSHI True NCI_RA007_Epitope_Rep2 936.48175092524 936.48064993586 72.437 2 -2.598527675309593 0.46057106531758224 1.0 ['ENST00000402198.5_1_3:9495535-9506325:+|nuORF'] 120755 4873 VGAVVRYS True NCI_RA007_Epitope_Rep1 849.4708518883699 849.46974993586 23.034 2 -2.599023271987164 0.46060451959444426 1.0 ['nc|ENSG00000121904|Q7Z408|CSMD2', 'ENSG00000121904|ENST00000373381|CSMD2'] 89825 18187 RFKGGRRK True NCI_RA007_Epitope_Rep1 1003.6151651366298 1003.61406993586 74.886 2 -2.5991451613747314 0.46060451959444426 1.0 ['ENST00000335934.8_1_2:24307179-24307821:-|nuORF'] 114947 16480 TTGNKVLG True NCI_RA007_Epitope_Rep4 788.43921740692 788.43812993586 71.44 2 -2.5992996948042633 0.46060451959444426 1.0 ['ENST00000434805.1_1_1:35816564-35817152:+|nuORF'] 133444 16861 WGGRGGLM True NCI_RA007_Epitope_Rep3 832.4013924295599 832.40028993586 74.195 2 -2.5995696380279836 0.46060451959444426 1.0 ['ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 123901 24968 VKHIEKTT True NCI_RA007_Epitope_Rep5 954.5498304850599 954.54872993586 103.53 2 -2.6008894092835035 0.46061023413497193 1.0 ['ENST00000448108.6_1_11:93469276-93469306:-|nuORF'] 133849 25120 WLYKFAKIL True PC9_epitope_Rep1 1180.7008518231999 1180.6997499358602 101.51 2 -2.602330948850896 0.4606119032989385 1.0 ['L1ME1_dup14741|chr8:25510836-25512219:-|1.1935286187833651|0.2188578600898351|2.45|501.0|44|2|sense'] 69811 23047 LWVMRVQK True PC9_epitope_Rep4 1058.60590589254 1058.6048099358602 96.872 2 -2.6029371920008875 0.4606119032989385 1.0 ['SLAMF9|p.I257M|1|0.13|ENSG00000162723|chr1:159951760-159951760|G/C|missense_variant'] 11892 3562 DHQPGDIF True PC9_epitope_Rep1 927.40864555463 927.40754993586 18.628 2 -2.602944673281017 0.4606119032989385 1.0 ['nc|ENSG00000154930|Q9NUB1-4|ACSS1', 'nc|ENSG00000154930|Q9NUB1-2|ACSS1', 'ENSG00000154930|ENST00000323482|ACSS1', 'nc|ENSG00000154930|Q9NUB1-3|ACSS1'] 140239 22288 YWRGNCKKA True NCI_RA007_Epitope_Rep5 1124.55493294884 1124.5538299358602 92.879 2 -2.60328459332805 0.4606119032989385 1.0 ['nc|ENSG00000139697|A3KN83-3|SBNO1', 'nc|ENSG00000139697|A3KN83-2|SBNO1', 'ENSG00000139697|ENST00000602398|SBNO1'] 79454 8055 PGPLSKQGS True PC9_epitope_Rep2 869.46068112749 869.45958993586 36.343 2 -2.6036289347848967 0.46061761745855184 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 137831 23516 YPFVPVFF True PC9_epitope_Rep1 1014.5214904788999 1014.52038993586 95.241 2 -2.6045531240625017 0.46064130676581816 1.0 ['chr6:168585980-168598818|151|82.08|0.04|10.94|+|2|TE_info:L1ME2z,L1ME2z_dup2627,L1,LINE,donor,-,168585259,168585980|None,SMOC2|1'] 124421 23777 VLEKLKFT True NCI_RA007_Epitope_Rep3 976.5957180483199 976.59516496793 103.05 1 -2.604784029983286 0.46064130676581816 1.0 ['nc|ENSG00000112655|Q13308-4|PTK7', 'ENSG00000112655|ENST00000230419|PTK7', 'nc|ENSG00000112655|Q13308-6|PTK7', 'nc|ENSG00000112655|Q13308-5|PTK7', 'PTK7|p.V496F|1|0.19|ENSG00000112655|chr6:43139259-43139259|G/T|missense_variant'] 52080 24857 KLLILRCFR True PC9_epitope_Rep6 1160.72160435112 1160.72050993586 110.41 2 -2.6050059865267943 0.46064130676581816 1.0 ['nc|ENSG00000197653|Q8IVF4|DNAH10', 'ENSG00000197653|ENST00000673944|DNAH10'] 129204 10966 VTDKKIAI True NCI_RA007_Epitope_Rep4 886.5487678558999 886.54766993586 49.048 2 -2.6054893257464147 0.46064130676581816 1.0 ['ENSG00000109814|ENST00000316423|UGDH', 'nc|ENSG00000109814|O60701-3|UGDH', 'nc|ENSG00000109814|O60701-2|UGDH'] 16953 14930 EGGGGKLK True NCI_RA007_Epitope_Rep5 744.41300265908 744.4124549679301 64.094 1 -2.6061927778095217 0.46064130676581816 1.0 ['GRK5|p.R23L|1|0.23|ENSG00000198873|chr10:119326531-119326531|G/T|missense_variant'] 111500 10980 TLLLWFIWFSN True NCI_RA007_Epitope_Rep5 1438.76490863174 1438.76380993586 48.871 2 -2.60678654460088 0.46064130676581816 1.0 ['ENSG00000166111|ENST00000610966|SVOP'] 112560 22595 TPAHHPPG True PC9_epitope_Rep6 812.3929359208399 812.39182993586 99.95 2 -2.6069041815730527 0.4606470201902502 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 112559 22514 TPAHHPPG True PC9_epitope_Rep6 812.3929359208399 812.39182993586 99.604 2 -2.607135740250693 0.46065440062707214 1.0 ['ENST00000264552.13_1_19:55918184-55919114:-|nuORF', 'ENST00000589978.1_1_19:55915759-55919114:-|nuORF'] 69819 7325 LWWQPWWWWKL True NCI_RA007_Epitope_Rep2 1713.8608747052497 1713.85921490379 33.115 3 -2.60780132234753 0.46065440062707214 1.0 ['chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 89604 16474 RESRYEEEEEQ True PC9_epitope_Rep5 1482.6222797008202 1482.62118993586 68.365 2 -2.6082280055807283 0.46065440062707214 1.0 ['ENSG00000092201|ENST00000216297|SUPT16H'] 82604 22399 PVKKGVPM True PC9_epitope_Rep1 854.5047948689399 854.50368993586 90.977 2 -2.6086931302324805 0.46065440062707214 1.0 ['MRPS35-PPFIBP1|2|fusion', 'MRPS35-PPFIBP1|1|fusion', 'nc|ENSG00000061794|P82673-2|MRPS35', 'ENSG00000061794|ENST00000081029|MRPS35', 'MRPS35-PPFIBP1|3|fusion'] 49546 24755 KKGRGRYI True PC9_epitope_Rep4 976.5930327097199 976.5924849679301 103.72 1 -2.60912562679503 0.46065440062707214 1.0 ['nc|ENSG00000048707|Q5THJ4-2|VPS13D', 'ENSG00000048707|ENST00000620676|VPS13D', 'VPS13D|p.E3824Dfs*6|1|0.2|ENSG00000048707|chr1:12385360-12385366|AGCAGGA/-|frameshift_variant', 'VPS13D|p.D3554Tfs*11|1|0.35|ENSG00000048707|chr1:12369552-12369552|G/-|frameshift_variant'] 121141 15388 VGGGKSNP True H1975_Epitope_Rep2 714.36605246666 714.3655049679301 64.349 1 -2.609768168546291 0.46066011354969916 1.0 ['FLI1|p.E96K|1|0.31|ENSG00000151702|chr11:128768173-128768173|G/A|missense_variant'] 60697 26730 LIWTEPKY True NCI_RA007_Epitope_Rep5 1048.5593325395998 1048.55822993586 110.54 2 -2.613298526526619 0.4607408035080658 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 10454 25037 CMDTYVLG True H1975_Epitope_Rep2 900.3721260168799 900.37102993586 102.88 2 -2.6133982090148096 0.4607408035080658 1.0 ['ENSG00000169484|ENST00000641793|OR4K14'] 71782 23436 MNLLPKSS True PC9_epitope_Rep3 888.4738886634801 888.47278993586 95.424 2 -2.6137997388548424 0.4607408035080658 1.0 ['nc|ENSG00000010165|Q8N6R0-1|METTL13', 'nc|ENSG00000010165|Q8N6R0-4|METTL13', 'ENSG00000010165|ENST00000361735|METTL13'] 10132 7402 CARDLEATV True NCI_RA007_Epitope_Rep2 976.46478053176 976.46368993586 33.417 2 -2.6142771427512823 0.46075222691790324 1.0 ['ENST00000375608.7_2_13:113548693-113669133:+|nuORF'] 85035 23653 QIIPGKKYA True NCI_RA007_Epitope_Rep3 1016.6018660579199 1016.60076993586 102.57 2 -2.614383241611485 0.46075222691790324 1.0 ['ENSG00000139324|ENST00000266712|TMTC3', 'nc|ENSG00000139324|Q6ZXV5|TMTC3'] 68752 17223 LVDMAKKL True NCI_RA007_Epitope_Rep3 916.54157430048 916.54046993586 75.644 2 -2.616903979650279 0.46076853009087637 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 137716 20901 YMVVYLVI True NCI_RA007_Epitope_Rep4 998.5510763550197 998.54996993586 90.583 2 -2.6181370471936165 0.4608060159932214 1.0 ['ENST00000602063.5_1_19:52495975-52496068:-|nuORF'] 111982 23449 TLSLKDRR True PC9_epitope_Rep2 987.58252759567 987.58142993586 95.668 2 -2.6196502647748696 0.46083290967632606 1.0 ['ENSG00000011114|ENST00000334746|BTBD7', 'BTBD7|p.H927Tfs*21|1|0.19|ENSG00000011114|chr14:93242893-93242894|-/T|frameshift_variant'] 133432 6523 WFYRRFLCFER True NCI_RA007_Epitope_Rep2 1621.79762282569 1621.79652993586 29.984 2 -2.6207267805103944 0.4608427674288074 1.0 ['ENST00000486256.5_1_7:6791019-6791091:+|nuORF'] 133952 25453 WPGKPVPA True PC9_epitope_Rep2 850.4701236123799 850.46902993586 103.59 2 -2.6207389782339536 0.4608427674288074 1.0 ['ENST00000488474.1_1_7:736653-736737:-|nuORF'] 109336 23835 TGHPGVIP True NCI_RA007_Epitope_Rep1 776.41808803952 776.41753496793 98.563 1 -2.620994080569241 0.4608427674288074 1.0 ['ENSG00000119782|ENST00000380986|FKBP1B'] 78655 20594 PEAAHPAP True PC9_epitope_Rep6 788.3817025308 788.38115496793 91.943 1 -2.6214086593207333 0.4608427674288074 1.0 ['ENSG00000173404|ENST00000310227|INSM1'] 83267 26086 QAEPSFPF True H1975_Epitope_Rep1 921.4232329896099 921.4226849679301 108.31 1 -2.6214280398304206 0.4608427674288074 1.0 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 52452 22694 KPHFKLFH True PC9_epitope_Rep3 1052.5919700805598 1052.59137496793 92.561 1 -2.621957085973745 0.4608427674288074 1.0 ['nc|ENSG00000075651|Q13393-4|PLD1', 'ENSG00000075651|ENST00000351298|PLD1', 'PLD1|p.S611N|1|0.17|ENSG00000075651|chr3:171686720-171686720|C/T|missense_variant'] 94320 3739 RWVLFHFWFKN True NCI_RA007_Epitope_Rep1 1578.8248235496997 1578.8231849037902 18.518 3 -2.6221444933216667 0.4608427674288074 1.0 ['ENST00000592061.1_1_19:19738235-19738493:-|nuORF'] 63924 23328 LPWEQREK True H1975_Epitope_Rep2 1084.5665431783598 1084.5654499358602 96.199 2 -2.622758154021306 0.4608427674288074 1.0 ['ENST00000482648.5_1_9:135973382-135973505:-|nuORF'] 39063 26577 HKVLKGHH True PC9_epitope_Rep1 954.55116789774 954.55006993586 107.96 2 -2.623393877779307 0.4608427674288074 1.0 ['WDR72|p.L895Cfs*7|1|0.3|ENSG00000166415|chr15:53615522-53615522|A/-|frameshift_variant', 'ENSG00000166415|ENST00000360509|WDR72'] 71175 20559 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 86.02 2 -2.62339591267396 0.4608427674288074 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 39207 24797 HLGQLAKG True PC9_epitope_Rep4 822.47118624154 822.47008993586 103.88 2 -2.6234796441216677 0.4608427674288074 1.0 ['ENSG00000143127|ENST00000369304|ITGA10', 'nc|ENSG00000143127|O75578-3|ITGA10'] 13817 12185 DQVGILAGWFK True NCI_RA007_Epitope_Rep2 1232.65535818276 1232.6542699358602 51.994 2 -2.6240809499349815 0.460843596776414 1.0 ['ENSG00000179134|ENST00000610417|SAMD4B'] 49545 21091 KKGKGASS True PC9_epitope_Rep3 761.43955176009 761.43844993586 86.409 2 -2.6244948233697714 0.460843596776414 1.0 ['ENSG00000108582|ENST00000225719|CPD', 'nc|ENSG00000108582|O75976-2|CPD'] 60864 25610 LKMRGIIKV True NCI_RA007_Epitope_Rep1 1056.68415621324 1056.68304993586 105.99 2 -2.6255431481712597 0.4608598962194218 1.0 ['ENST00000314759.5_1_13:21736000-21742172:-|nuORF'] 92381 26109 RQQRTQAHL True NCI_RA007_Epitope_Rep5 1136.6162873354397 1136.6151899358601 108.01 2 -2.625799484531107 0.4608656055744406 1.0 ['ENSG00000188959|ENST00000400613|C9orf152'] 3408 11140 AGKKHGGL True NCI_RA007_Epitope_Rep1 766.4449714936998 766.4444249679301 47.331 1 -2.625944695573736 0.4608713148085395 1.0 ['ENSG00000188910|ENST00000373366|GJB3'] 10579 23435 CRNPDAVA True H1975_Epitope_Rep3 844.3861362882399 844.38502993586 97.811 2 -2.6278712768003087 0.4608770239217223 1.0 ['ENSG00000198670|ENST00000316300|LPA'] 18508 26101 EKPRPLHALA True PC9_epitope_Rep1 1130.6560268891 1130.65492993586 105.66 2 -2.6282616104060277 0.46088273291399284 1.0 ['ENST00000557803.5_1_14:102802004-102808513:+|nuORF', 'nc|ENSG00000022976|A8K0R7|ZNF839', 'nc|ENSG00000022976|A8K0R7-2|ZNF839', 'ENSG00000022976|ENST00000442396|ZNF839'] 54461 24687 LAAAAHDV True H1975_Epitope_Rep1 766.39735259494 766.39680496793 102.27 1 -2.6297502942085886 0.4609104482353315 1.0 ['ENSG00000171408|ENST00000308191|PDE7B'] 49364 24145 KIHLTENGIRV True PC9_epitope_Rep5 1278.74081914222 1278.7397299358602 97.861 2 -2.6298591038087595 0.4609104482353315 1.0 ['nc|ENSG00000133706|Q9P2J5-2|LARS1', 'ENSG00000133706|ENST00000394434|LARS1', 'nc|ENSG00000133706|Q9P2J5-3|LARS1'] 47166 12414 IWREENQPG True H1975_Epitope_Rep2 1127.5359713260698 1127.5348699358601 52.836 2 -2.6303449988276086 0.4609104482353315 1.0 ['ENST00000557419.5_1_14:86027575-86029039:+|nuORF'] 102850 4991 SQGPPGPL True NCI_RA007_Epitope_Rep5 751.38645355807 751.38534993586 25.902 2 -2.6326149468791784 0.46093245375321634 1.0 ['ENSG00000150961|ENST00000280551|SEC24D', 'nc|ENSG00000150961|O94855-2|SEC24D', 'ENST00000509818.5_1_4:119687763-119745832:-|nuORF', 'ENST00000514561.5_1_4:119681750-119745902:-|nuORF'] 97972 26517 SHRQDYLV True NCI_RA007_Epitope_Rep5 1016.5039429217999 1016.50284993586 109.62 2 -2.6328038944463663 0.46093245375321634 1.0 ['ENSG00000182793|ENST00000370989|GSTA5'] 36807 12062 GVPPPPGT True NCI_RA007_Epitope_Rep4 720.38063990164 720.3800949679301 53.396 1 -2.6342264971092146 0.4609398161873703 1.0 ['chr1:26849668-26850301|134|10.86|0.13|6.42|+|1|None,ZDHHC18|1'] 32537 24585 GGSKGLVR True H1975_Epitope_Rep3 772.4555361774 772.45442993586 102.3 2 -2.6342287346535698 0.4609398161873703 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'nc|ENSG00000149527|O75038-5|PLCH2'] 39544 23575 HPFVEVSF True NCI_RA007_Epitope_Rep5 960.4705175352 960.46942993586 97.997 2 -2.6344375102866335 0.4609398161873703 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B'] 58622 3692 LFFRVFFFF True NCI_RA007_Epitope_Rep5 1268.6746370753597 1268.6729849037902 20.254 3 -2.634450107622947 0.4609398161873703 1.0 ['ENST00000371335.4_1_X:119571204-119571369:-|nuORF'] 52512 23648 KPPKGWFR True PC9_epitope_Rep2 1014.5763200164199 1014.57522993586 96.432 2 -2.634529067131936 0.4609398161873703 1.0 ['ENST00000546727.5_1_12:113545343-113557136:-|nuORF', 'ENST00000551051.5_1_12:113546023-113565713:-|nuORF', 'RASAL1|p.M351Ifs*22|1|0.16|ENSG00000111344|chr12:113115215-113115216|-/A|frameshift_variant', 'ENST00000548972.5_1_12:113545343-113573291:-|nuORF', 'ENST00000418411.6_1_12:113540888-113573291:-|nuORF', 'nc|ENSG00000111344|O95294-2|RASAL1', 'nc|ENSG00000111344|O95294|RASAL1', 'ENSG00000111344|ENST00000548055|RASAL1', 'nc|ENSG00000111344|O95294-3|RASAL1'] 71506 22715 MKPAIAPK True PC9_epitope_Rep1 854.5047948689399 854.50368993586 92.177 2 -2.6348172630197713 0.4609455238498597 1.0 ['nc|ENSG00000180263|Q6ZV73-2|FGD6', 'ENSG00000180263|ENST00000343958|FGD6'] 124491 20529 VLFFKVPK True PC9_epitope_Rep6 976.6109741896398 976.60986993586 91.693 2 -2.6369608428161704 0.46096272535755495 1.0 ['DSTYK|p.F277L|1|0.25|ENSG00000133059|chr1:205169656-205169656|G/C|missense_variant'] 117380 23383 VACGASHH True NCI_RA007_Epitope_Rep4 780.3337067925602 780.33260993586 101.51 2 -2.6374607912211907 0.46096272535755495 1.0 ['ENST00000317683.3_1_19:46216786-46234124:-|nuORF'] 38358 23716 HGDTALHA True H1975_Epitope_Rep1 820.3827651599601 820.38166993586 98.458 2 -2.6376453998237417 0.46096272535755495 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 140404 9730 YYFCRWYRNRK True H1975_Epitope_Rep3 1653.7986854548496 1653.79758993586 42.446 2 -2.63775684917017 0.46096272535755495 1.0 ['ENST00000503689.1_1_4:75248329-75250522:+|nuORF', 'ENSG00000124882|ENST00000244869|EREG'] 28680 4148 FSSSWWTR True PC9_epitope_Rep3 1055.4824792012298 1055.48138993586 21.074 2 -2.6379627263530545 0.46096272535755495 1.0 ['ENST00000573520.5_1_16:4521405-4524561:-|nuORF', 'ENST00000571291.5_1_16:4519639-4524561:-|nuORF', 'ENST00000283429.10_1_16:4519403-4524606:-|nuORF', 'ENST00000404295.7_1_16:4519400-4524561:-|nuORF', 'ENST00000574733.5_1_16:4519403-4524387:-|nuORF'] 60863 25439 LKMRGIIKV True NCI_RA007_Epitope_Rep1 1056.68415621324 1056.68304993586 105.27 2 -2.639711018256236 0.46096272535755495 1.0 ['ENST00000314759.5_1_13:21736000-21742172:-|nuORF'] 81210 24018 PPLMLIIF True PC9_epitope_Rep2 942.5612471159 942.56014993586 97.88 2 -2.6403508855803657 0.46096272535755495 1.0 ['SLC6A19|p.L540P|1|0.21|ENSG00000174358|chr5:1221231-1221231|T/C|missense_variant'] 104115 15828 SRYDGAGS True NCI_RA007_Epitope_Rep5 811.3460452980698 811.34494993586 67.603 2 -2.6404881593149674 0.46096272535755495 1.0 ['nc|ENSG00000110497|Q9C0C7-2|AMBRA1', 'ENSG00000110497|ENST00000683756|AMBRA1', 'AMBRA1|p.W1016Afs*8|1|0.14|ENSG00000110497|chr11:46417968-46417984|CTGGCTCAGGCAGCCAA/-|frameshift_variant', 'nc|ENSG00000110497|Q9C0C7-4|AMBRA1', 'nc|ENSG00000110497|Q9C0C7-5|AMBRA1', 'ENST00000529558.1_1_11:46526218-46534359:-|nuORF'] 133459 10045 WGLFYFYF True PC9_epitope_Rep5 1141.52730413533 1141.52677496793 43.617 1 -2.640775795835873 0.46096272535755495 1.0 ['ENST00000515359.6_1_3:49570755-49570953:+|nuORF'] 80077 24630 PKGNGLIP True NCI_RA007_Epitope_Rep4 794.46503823194 794.46394993586 106.98 2 -2.640854394922245 0.46096272535755495 1.0 ['nc|ENSG00000170390|Q8N568-2|DCLK2', 'ENSG00000170390|ENST00000296550|DCLK2', 'nc|ENSG00000170390|Q8N568-3|DCLK2'] 131672 9049 VWLLQRRRYEE True NCI_RA007_Epitope_Rep2 1546.8368447853802 1546.8357499358601 39.799 2 -2.6411653513601165 0.46096272535755495 1.0 ['ENST00000370641.3_1_1:84967597-84971964:-|nuORF'] 29828 22261 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 91.996 2 -2.6414386761906576 0.46096272535755495 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 107992 24410 TCSPSGRW True NCI_RA007_Epitope_Rep5 892.38613628824 892.38502993586 101.36 2 -2.6416706542055857 0.46096272535755495 1.0 ['PCDHB11|p.R478Tfs*63|1|0.09|ENSG00000197479|chr5:141201206-141201209|AGAG/-|frameshift_variant'] 29838 23377 FVVLIVPM True NCI_RA007_Epitope_Rep2 916.54559705176 916.54448993586 97.811 2 -2.64189932485173 0.46096272535755495 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 87217 18211 QSPKVCGY True NCI_RA007_Epitope_Rep5 880.41128840692 880.41018993586 76.857 2 -2.6422308027874246 0.46096272535755495 1.0 ['ENSG00000151694|ENST00000310823|ADAM17', 'nc|ENSG00000151694|P78536-2|ADAM17', 'ENST00000478059.1_1_2:9667906-9695734:-|nuORF'] 121143 19319 VGGGKSNP True PC9_epitope_Rep6 714.36605246666 714.3655049679301 86.959 1 -2.6427787568878185 0.46096272535755495 1.0 ['FLI1|p.E96K|1|0.31|ENSG00000151702|chr11:128768173-128768173|G/A|missense_variant'] 83927 23865 QEKLDAFF True H1975_Epitope_Rep2 996.4916469025999 996.49054993586 98.308 2 -2.6437448692761754 0.4609741380222944 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4'] 71495 24815 MKLWKKRW True NCI_RA007_Epitope_Rep5 1174.6797395391397 1174.6786499358602 102.94 2 -2.643991438538248 0.4609741380222944 1.0 ['ENSG00000052126|ENST00000429027|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-2|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-4|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-8|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-5|PLEKHA5', 'nc|ENSG00000052126|Q9HAU0-3|PLEKHA5', 'PLEKHA5-AEBP2|4|fusion', 'PLEKHA5-AEBP2|2|fusion', 'PLEKHA5-AEBP2|3|fusion', 'ENST00000510738.2_1_12:19413894-19459437:+|nuORF', 'PLEKHA5-AEBP2|10|fusion', 'PLEKHA5-AEBP2|8|fusion', 'PLEKHA5-AEBP2|9|fusion', 'PLEKHA5-AEBP2|7|fusion', 'PLEKHA5-AEBP2|6|fusion', 'PLEKHA5-AEBP2|5|fusion', 'PLEKHA5-AEBP2|12|fusion', 'PLEKHA5-AEBP2|11|fusion', 'PLEKHA5-AEBP2|1|fusion'] 81237 23132 PPPAPPKL True NCI_RA007_Epitope_Rep4 815.49052470379 815.48942993586 100.42 2 -2.645154930272803 0.4610010162601626 1.0 ['ENSG00000197483|ENST00000598519|ZNF628'] 11395 3173 DFINMRAWFH True NCI_RA007_Epitope_Rep1 1335.6182614813897 1335.6171699358601 16.233 2 -2.6461020693522506 0.4610067220663738 1.0 ['ENST00000358701.9_2_9:139100252-139100573:-|nuORF'] 63632 24212 LPNKACFL True PC9_epitope_Rep2 904.4840594243599 904.48296993586 98.669 2 -2.646686475958434 0.46103442435533726 1.0 ['nc|ENSG00000162688|P35573-2|AGL', 'nc|ENSG00000162688|P35573-3|AGL', 'ENSG00000162688|ENST00000361915|AGL', 'AGL|p.A457P|1|0.36|ENSG00000162688|chr1:99876543-99876543|G/C|missense_variant'] 115669 16387 TVKSSSKP True H1975_Epitope_Rep2 832.4654321547599 832.4648849679301 68.253 1 -2.647265020885165 0.46103442435533726 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336878-220337913:+|nuORF'] 55193 8146 LAPIIQEFFSS True H1975_Epitope_Rep2 1250.65468947642 1250.65303490379 36.283 3 -2.6473161372311087 0.46103442435533726 1.0 ['ENSG00000162882|ENST00000294973|HAAO'] 10409 19996 CLIHEAFT True NCI_RA007_Epitope_Rep5 932.4425885352 932.44148993586 83.831 2 -2.648289756326842 0.46104012956631274 1.0 ['nc|ENSG00000020577|Q9UPU9-2|SAMD4A', 'nc|ENSG00000020577|Q9UPU9-3|SAMD4A', 'ENSG00000020577|ENST00000554335|SAMD4A'] 49161 16868 KGPARQAK True H1975_Epitope_Rep3 854.5086343794198 854.50752993586 70.435 2 -2.648823910501782 0.46105153962591694 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 104500 15794 SSPPNKLS True H1975_Epitope_Rep2 828.43413202648 828.43302993586 65.936 2 -2.649249895445634 0.46105153962591694 1.0 ['nc|ENSG00000275410|P35680-3|HNF1B', 'nc|ENSG00000275410|P35680-4|HNF1B', 'nc|ENSG00000275410|P35680-2|HNF1B', 'ENSG00000275410|ENST00000617811|HNF1B'] 133848 23327 WLYKFAKIL True H1975_Epitope_Rep2 1180.7008518231999 1180.6997499358602 96.195 2 -2.649740951950626 0.4610572444745533 1.0 ['L1ME1_dup14741|chr8:25510836-25512219:-|1.1935286187833651|0.2188578600898351|2.45|501.0|44|2|sense'] 29840 22514 FVVLIVPM True NCI_RA007_Epitope_Rep3 916.54559705176 916.54448993586 97.87 2 -2.650824702395532 0.46106624612355923 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 10447 7270 CLYALFLF True PC9_epitope_Rep1 988.5092115430399 988.50810993586 32.776 2 -2.6508247906842253 0.46106624612355923 1.0 ['ENSG00000091262|ENST00000205557|ABCC6', 'ENST00000456970.6_1_16:16251574-16267200:-|nuORF'] 49159 16848 KGPARQAK True H1975_Epitope_Rep2 854.5086343794198 854.50752993586 70.053 2 -2.6513012737423174 0.46106624612355923 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 38359 24551 HGDTALHA True H1975_Epitope_Rep3 820.3827651599601 820.38166993586 102.17 2 -2.651871127290254 0.46106624612355923 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 124813 25438 VLLHTLGV True PC9_epitope_Rep2 850.5276384885 850.52708496793 103.53 1 -2.652159707313919 0.46106624612355923 1.0 ['ENST00000318673.6_1_2:220033361-220034039:-|nuORF'] 109325 14085 TGGGGKAK True NCI_RA007_Epitope_Rep2 674.3711378470999 674.3705849679301 59.449 1 -2.653214291359833 0.46106624612355923 1.0 ['ENST00000443451.6_1_12:124809950-124819187:-|nuORF'] 33941 18692 GNAIEKQKPL True NCI_RA007_Epitope_Rep1 1096.62405805448 1096.62296993586 76.85 2 -2.653664472189858 0.46106624612355923 1.0 ['nc|ENSG00000107263|Q13905-3|RAPGEF1'] 92976 16405 RRQKRLFCRYH True H1975_Epitope_Rep1 1561.85245236321 1561.85134993586 68.463 2 -2.654072081811959 0.46106624612355923 1.0 ['nc|ENSG00000072682|O15460|P4HA2', 'ENSG00000072682|ENST00000360568|P4HA2'] 80277 8276 PLDYTSQRFYM True NCI_RA007_Epitope_Rep2 1419.6492868261498 1419.64818993586 36.829 2 -2.6548590226003053 0.46106624612355923 1.0 ['nc|ENSG00000178460|Q4G0Z9-2|MCMDC2', 'nc|ENSG00000178460|Q4G0Z9-4|MCMDC2', 'ENST00000428734.5_1_8:67786448-67831401:+|nuORF', 'ENSG00000178460|ENST00000422365|MCMDC2'] 10721 13078 CVCLIVPLF True NCI_RA007_Epitope_Rep3 1005.5391317723299 1005.53802993586 58.723 2 -2.655797934650603 0.46107195021273895 1.0 ['ENST00000508066.1_1_4:36162071-36231213:-|nuORF'] 40429 14944 HRYREQEYRRR True NCI_RA007_Epitope_Rep2 1647.8454524064696 1647.84434993586 62.809 2 -2.656003306096103 0.46107277422632403 1.0 ['PPIG|p.A682Gfs*2|1|0.15|ENSG00000138398|chr2:169637293-169637294|-/A|frameshift_variant', 'ENSG00000138398|ENST00000260970|PPIG'] 80390 21678 PLHPGLGY True PC9_epitope_Rep6 852.4493881678 852.44828993586 96.269 2 -2.656966287201214 0.46107277422632403 1.0 ['ENST00000527274.2_1_11:66245031-66245460:-|nuORF'] 29845 25015 FVVLIVPM True PC9_epitope_Rep1 916.54559705176 916.54448993586 101.15 2 -2.6573462935647236 0.4610744221488443 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 36284 23127 GVGPGKKY True PC9_epitope_Rep6 804.4493881678 804.4488349679301 102.06 1 -2.6582838415783074 0.4610744221488443 1.0 ['ENST00000555891.1_1_14:93043680-93052850:+|nuORF', 'ENST00000555908.5_1_14:93042630-93052850:+|nuORF'] 53126 23425 KSILSEEDH True H1975_Epitope_Rep2 1056.50875351872 1056.5076499358602 96.57 2 -2.6586639633016333 0.4610744221488443 1.0 ['ENST00000574512.1_1_17:5409229-5421219:-|nuORF'] 94736 10520 RYLLTPSM True H1975_Epitope_Rep2 979.51608782863 979.51498993586 45.485 2 -2.6587083340028217 0.4610744221488443 1.0 ['nc|ENSG00000128789|Q969U7-2|PSMG2', 'ENSG00000128789|ENST00000317615|PSMG2', 'PSMG2-PTPN2|5|fusion', 'PSMG2-PTPN2|1|fusion', 'PSMG2-PTPN2|6|fusion', 'PSMG2-PTPN2|8|fusion', 'PSMG2-PTPN2|7|fusion', 'PSMG2-PTPN2|2|fusion', 'PSMG2-PTPN2|4|fusion', 'PSMG2-PTPN2|3|fusion'] 86447 20480 QQRQRRRLPP True NCI_RA007_Epitope_Rep2 1333.7803329687697 1333.77922993586 84.734 2 -2.6599292481678862 0.4610760699318461 1.0 ['ENST00000298585.2_1_9:140476760-140476931:-|nuORF'] 102201 21356 SPSPACRQ True H1975_Epitope_Rep2 844.3861362882401 844.38502993586 88.367 2 -2.660368944319883 0.4610760699318461 1.0 ['OTOA|p.N80Mfs*31|1|0.5|ENSG00000155719|chr16:21681794-21681794|G/-|frameshift_variant'] 49172 23121 KGPARQAK True PC9_epitope_Rep5 854.5086343794198 854.50752993586 93.922 2 -2.6610010747881234 0.4610760699318461 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 80619 24715 PLPKIILE True PC9_epitope_Rep2 921.58990439189 921.58935496793 100.75 1 -2.6612281616845026 0.4610760699318461 1.0 ['ENSG00000130997|ENST00000511885|POLN', 'nc|ENSG00000130997|Q7Z5Q5-3|POLN', 'ENST00000515357.5_1_4:2158125-2230958:-|nuORF', 'ENST00000510344.1_1_4:2158487-2160929:-|nuORF'] 21049 15251 ERDLQHHEAII True NCI_RA007_Epitope_Rep5 1359.6895118453501 1359.6884099358601 65.353 2 -2.6627550543977683 0.4610817732530452 1.0 ['ENSG00000103021|ENST00000219299|CCDC113'] 34005 22476 GNINAVHLK True PC9_epitope_Rep5 964.54541381096 964.54430993586 91.457 2 -2.6640695161851986 0.46108747645353143 1.0 ['ENST00000510885.2_1_4:57460626-57460989:+|nuORF'] 80787 21741 PLSRKHGG True PC9_epitope_Rep1 850.4773342511398 850.47622993586 88.46 2 -2.6651766580045866 0.4611143446743214 1.0 ['ENSG00000142168|ENST00000270142|SOD1'] 48014 15899 KAKDRFRVP True PC9_epitope_Rep5 1115.65636124227 1115.6552699358601 66.146 2 -2.6660568892473675 0.46111599064540365 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 7661 22596 ASNRSCAI True PC9_epitope_Rep6 820.3861362882399 820.38502993586 99.955 2 -2.666298964100634 0.46111599064540365 1.0 ['ENSG00000113368|ENST00000261366|LMNB1', 'ENST00000504788.5_1_5:126112928-126171953:+|nuORF'] 49308 22970 KHRWFWLLPVK True PC9_epitope_Rep6 1508.87685912256 1508.87576993586 101.45 2 -2.6673955917068515 0.46111599064540365 1.0 ['ENSG00000119285|ENST00000366582|HEATR1'] 104582 26981 SSSSSSGT True H1975_Epitope_Rep2 698.2718772983001 698.27132496793 111.33 1 -2.667444593934186 0.46111599064540365 1.0 ['ENSG00000101350|ENST00000375712|KIF3B', 'nc|ENSG00000101350|O15066-2|KIF3B'] 122151 8237 VGRISRAQYNA True PC9_epitope_Rep2 1233.65781779425 1233.65672993586 37.041 2 -2.667748094493009 0.4611168135786923 1.0 ['STX11|p.A125G|1|0.37|ENSG00000135604|chr6:144187001-144187001|C/G|missense_variant'] 125928 24358 VPAAAAAH True H1975_Epitope_Rep3 706.3762232275401 706.3756749679301 101.43 1 -2.6680629651530245 0.4611168135786923 1.0 ['ENST00000358689.8_2_8:23290247-23290583:-|nuORF'] 44624 12954 IPIMAFAF True NCI_RA007_Epitope_Rep4 908.4829967951999 908.48188993586 56.92 2 -2.6698966180222174 0.4611184593407756 1.0 ['ENSG00000188338|ENST00000614032|SLC38A3'] 49166 22210 KGPARQAK True PC9_epitope_Rep1 854.5086343794198 854.50752993586 90.253 2 -2.6701980883644607 0.4611184593407756 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 114778 4393 TTADYDRD True PC9_epitope_Rep1 955.3883040328699 955.38720993586 21.785 2 -2.6702423614445205 0.4611184593407756 1.0 ['ENSG00000197081|ENST00000356956|IGF2R'] 71545 20170 MLCILKLASR True NCI_RA007_Epitope_Rep4 1146.6617065164999 1146.66060993586 87.277 2 -2.670410575565514 0.4611184593407756 1.0 ['RTTN|p.Q2020R|1|0.12|ENSG00000176225|chr18:70020709-70020709|T/C|missense_variant'] 121247 22225 VGGSCTRQHL True PC9_epitope_Rep3 1056.51346205968 1056.51236993586 90.773 2 -2.670853589705517 0.461124161428904 1.0 ['ENST00000511876.5_1_5:88185284-88199801:+|nuORF'] 49171 22141 KGPARQAK True PC9_epitope_Rep5 854.5086343794198 854.50752993586 90.202 2 -2.6715081949321293 0.4611274520176905 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 48680 24238 KELQLLVMIH True PC9_epitope_Rep4 1222.7107648839 1222.7096699358601 101.71 2 -2.672199728190188 0.4611274520176905 1.0 ['ENSG00000143842|ENST00000367204|SOX13', 'ENST00000367203.8_1_1:204082043-204086879:+|nuORF', 'ENST00000272193.10_1_1:204085443-204095259:+|nuORF'] 30800 18899 GAPPAHAP True PC9_epitope_Rep6 716.3605731634 716.36002496793 85.341 1 -2.6746085096419 0.4611274520176905 1.0 ['ENSG00000196976|ENST00000357360|LAGE3'] 68766 23073 LVDMAKKL True PC9_epitope_Rep4 916.54157430048 916.54046993586 96.972 2 -2.6754905328594583 0.4611274520176905 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 60862 25359 LKMRGIIKV True NCI_RA007_Epitope_Rep1 1056.68415621324 1056.68304993586 104.92 2 -2.675698544785663 0.4611274520176905 1.0 ['ENST00000314759.5_1_13:21736000-21742172:-|nuORF'] 3023 20820 AFSFRHAA True H1975_Epitope_Rep2 905.4507851501298 905.44968993586 86.209 2 -2.6761775234791005 0.4611274520176905 1.0 ['ENSG00000148204|ENST00000373631|CRB2', 'nc|ENSG00000148204|Q5IJ48-2|CRB2'] 49167 22415 KGPARQAK True PC9_epitope_Rep2 854.5086343794198 854.50752993586 91.713 2 -2.676299705789615 0.4611274520176905 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 99048 15463 SKTSGKAK True NCI_RA007_Epitope_Rep4 805.4657665079299 805.46466993586 67.144 2 -2.6769812299693165 0.4611274520176905 1.0 ['nc|ENSG00000123243|Q86UX2-4|ITIH5', 'ENST00000476417.5_1_10:7615057-7659255:-|nuORF'] 115935 14322 TVPNDGGP True NCI_RA007_Epitope_Rep3 755.3449826689099 755.34443496793 63.653 1 -2.677659560012174 0.4611543141300323 1.0 ['ENSG00000161800|ENST00000312377|RACGAP1', 'RACGAP1|p.D413Mfs*10|1|0.34|ENSG00000161800|chr12:49994233-49994233|C/-|frameshift_variant', 'ENST00000548158.1_1_12:50393384-50398020:-|nuORF'] 29825 18773 FVVLIVPM True H1975_Epitope_Rep2 916.54559705176 916.54448993586 77.942 2 -2.678317490496904 0.4611600152355157 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 9721 16496 AYIPSHSD True NCI_RA007_Epitope_Rep4 888.39774651776 888.39664993586 71.512 2 -2.679181295705199 0.4611722386796445 1.0 ['ENSG00000167972|ENST00000301732|ABCA3', 'ABCA3|p.L1195Sfs*4|1|0.4|ENSG00000167972|chr16:2284899-2284899|G/-|frameshift_variant', 'ENST00000563623.5_1_16:2339371-2378589:-|nuORF', 'ABCA3|p.E79K|1|0.82|ENSG00000167972|chr16:2326094-2326094|C/T|missense_variant', 'nc|ENSG00000167972|Q99758-2|ABCA3'] 110800 13537 TKRALPNN True NCI_RA007_Epitope_Rep3 912.51411368268 912.5130099358599 60.538 2 -2.679264094197903 0.4611722386796445 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53'] 52366 22770 KPGERKKT True PC9_epitope_Rep2 942.5610638750999 942.55996993586 93.077 2 -2.679668157147733 0.4611722386796445 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 70207 20461 LYLPSFFTY True NCI_RA007_Epitope_Rep4 1149.57464825057 1149.5740749679298 88.611 1 -2.680264299977395 0.4611722386796445 1.0 ['nc|ENSG00000137409|Q9NZJ7-2|MTCH1', 'ENSG00000137409|ENST00000373627|MTCH1'] 68749 20412 LVDMAKKL True H1975_Epitope_Rep2 916.54157430048 916.54046993586 84.577 2 -2.682541277158317 0.4611852823561771 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 92756 25450 RRKNVFIHK True PC9_epitope_Rep1 1196.7254438615998 1196.7243499358601 102.88 2 -2.6833170422366637 0.4611852823561771 1.0 ['SFMBT1|p.V676I|1|0.14|ENSG00000163935|chr3:52907614-52907614|C/T|missense_variant'] 65214 24209 LSEAHAAC True PC9_epitope_Rep4 800.34868815036 800.34758993586 101.6 2 -2.683841143492288 0.4611852823561771 1.0 ['ENSG00000132702|ENST00000255039|HAPLN2'] 90784 23803 RKRRRPLPRIP True PC9_epitope_Rep1 1443.9375023165096 1443.9364099358602 96.357 2 -2.6850123177622023 0.4611852823561771 1.0 ['ENST00000298966.2_11:93232511-93276567:-|nuORF'] 47871 23827 IYTSERFQN True PC9_epitope_Rep2 1156.5512870370399 1156.55018993586 97.121 2 -2.6850324076842966 0.4611852823561771 1.0 ['nc|ENSG00000189056|P78509-3|RELN', 'nc|ENSG00000189056|P78509-2|RELN', 'ENSG00000189056|ENST00000428762|RELN'] 43069 20267 IGHELLKP True PC9_epitope_Rep1 905.5334521449299 905.5329049679301 82.788 1 -2.6851729580796597 0.4611852823561771 1.0 ['ENST00000584476.1_1_17:55334873-55339700:+|nuORF'] 20188 964 ENSDNDDD True NCI_RA007_Epitope_Rep4 922.27881315354 922.27770993586 5.4043 2 -2.6855865296202768 0.4612015614586309 1.0 ['ENSG00000145700|ENST00000506364|ANKRD31', 'nc|ENSG00000145700|Q8N7Z5|ANKRD31'] 26603 24865 FKIPGTLHKI True NCI_RA007_Epitope_Rep1 1152.7019144523601 1152.7008099358602 102.92 2 -2.686257977145857 0.46121378172239796 1.0 ['nc|ENSG00000121690|Q96QD5-2|DEPDC7', 'ENSG00000121690|ENST00000241051|DEPDC7'] 84494 22387 QGRPFYQW True NCI_RA007_Epitope_Rep5 1080.5141136826799 1080.51300993586 93.276 2 -2.686290455319377 0.46121378172239796 1.0 ['ENSG00000105538|ENST00000222145|RASIP1', 'ENST00000601530.1_1_19:49224057-49228265:-|nuORF'] 37771 23459 HAWKGYRK True PC9_epitope_Rep6 1044.5617325814399 1044.56062993586 103.34 2 -2.6870386592878934 0.46121378172239796 1.0 ['ENSG00000177239|ENST00000371589|MAN1B1'] 137840 9734 YPGPGGGG True NCI_RA007_Epitope_Rep1 660.2867395167999 660.2861949679301 41.864 1 -2.688432868502793 0.46121378172239796 1.0 ['ENSG00000168303|ENST00000306984|MPLKIP'] 83383 7792 QARRLQED True PC9_epitope_Rep4 1014.5206556150998 1014.51954993586 37.371 2 -2.689084306338927 0.4612308798950642 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 49135 13829 KGGRKGGH True NCI_RA007_Epitope_Rep5 795.4463684760299 795.44526993586 59.87 2 -2.690165440595311 0.4612308798950642 1.0 ['ENSG00000106244|ENST00000350498|PDAP1', 'ENST00000512074.1_1_5:84845227-84845416:+|nuORF'] 104583 26509 SSSSSSGT True H1975_Epitope_Rep3 698.2718772983001 698.27132496793 110.67 1 -2.6907175298907906 0.4612308798950642 1.0 ['ENSG00000101350|ENST00000375712|KIF3B', 'nc|ENSG00000101350|O15066-2|KIF3B'] 69198 22094 LVMQQQHQ True PC9_epitope_Rep2 1010.4967493663801 1010.49564993586 90.457 2 -2.690970429952325 0.4612317000930862 1.0 ['ENSG00000108840|ENST00000682912|HDAC5', 'nc|ENSG00000108840|Q9UQL6-3|HDAC5', 'nc|ENSG00000108840|Q9UQL6-2|HDAC5', 'HDAC5|p.L646Sfs*24|1|0.2|ENSG00000108840|chr17:44086686-44086686|G/-|frameshift_variant'] 11439 21936 DFRKWYQIMKK True NCI_RA007_Epitope_Rep1 1541.8176895639297 1541.81658993586 89.821 2 -2.6915136208514947 0.4612317000930862 1.0 ['nc|ENSG00000115750|Q53T94-2|TAF1B', 'ENSG00000115750|ENST00000263663|TAF1B', 'nc|ENSG00000115750|Q53T94-3|TAF1B'] 90969 25370 RLHTGVKRY True NCI_RA007_Epitope_Rep1 1128.651610215 1128.65050993586 104.97 2 -2.6929038937369136 0.46124961656847296 1.0 ['nc|ENSG00000213020|Q8N823-2|ZNF611', 'ENSG00000213020|ENST00000652185|ZNF611'] 38916 22858 HIMKYKKK True PC9_epitope_Rep3 1074.6372060208198 1074.63667496793 93.194 1 -2.6932553727653583 0.46124961656847296 1.0 ['nc|ENSG00000056736|Q9NRM6-2|IL17RB', 'ENST00000475124.1_1_3:53880615-53891834:+|nuORF', 'ENSG00000056736|ENST00000288167|IL17RB'] 123850 16371 VIYERHQV True PC9_epitope_Rep2 1042.5559784946602 1042.55488993586 68.215 2 -2.693538290473195 0.46124961656847296 1.0 ['ENST00000491592.1_1_2:55200947-55201100:-|nuORF'] 81635 23052 PRRRRRREER True PC9_epitope_Rep4 1465.85629187369 1465.8551899358602 96.891 2 -2.694168807289784 0.46124961656847296 1.0 ['ENST00000361198.9_1_10:103874266-103874668:-|nuORF'] 96826 7577 SESKAREL True PC9_epitope_Rep1 918.4770594676199 918.47596993586 33.964 2 -2.6947830080508592 0.46124961656847296 1.0 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000484626.1_1_6:7404210-7405259:+|nuORF'] 39397 22769 HLVQHGKI True PC9_epitope_Rep6 930.5399345077 930.53882993586 100.67 2 -2.6955434370681215 0.4612553150980517 1.0 ['ENSG00000171817|ENST00000316433|ZNF540', 'nc|ENSG00000171817|Q8NDQ6-2|ZNF540', 'nc|ENSG00000171817|Q8NDQ6-4|ZNF540', 'ENST00000589285.1_1_19:38102250-38104161:+|nuORF'] 117483 13737 VAEGHPGL True PC9_epitope_Rep5 778.3973525949399 778.39680496793 57.862 1 -2.69695724833592 0.4612821679024359 1.0 ['ENST00000338820.7_1_10:74095033-74095504:-|nuORF'] 22058 12813 ESRRWRPERIP True PC9_epitope_Rep5 1480.8011279829998 1480.79947490379 54.296 3 -2.6975715415962176 0.46129844305297 1.0 ['nc|ENSG00000167302|Q96N21|TEPSIN', 'ENSG00000167302|ENST00000637944|TEPSIN', 'nc|ENSG00000167302|Q96N21-2|TEPSIN'] 71895 22447 MPPKKKPQLP True PC9_epitope_Rep4 1162.6896355164997 1162.68852993586 94.574 2 -2.6984399007887014 0.4613041408852927 1.0 ['ENSG00000168334|ENST00000340369|XIRP1', 'nc|ENSG00000168334|Q702N8-3|XIRP1'] 111938 24871 TLSAHLIKH True PC9_epitope_Rep5 1018.59236400338 1018.5912699358599 100.82 2 -2.6997107031206196 0.46132693100931793 1.0 ['ENSG00000173258|ENST00000309235|ZNF483'] 16228 16981 EEGDQAGR True H1975_Epitope_Rep2 860.3624236381999 860.36132993586 70.565 2 -2.7004354743209196 0.46132693100931793 1.0 ['ENSG00000129028|ENST00000249861|THAP10'] 128246 19423 VRWLRFWLLFW True NCI_RA007_Epitope_Rep2 1620.9081592508396 1620.9070699358601 80.455 2 -2.700920291604737 0.46132693100931793 1.0 ['ENST00000531894.5_1_16:70011782-70023933:-|nuORF'] 115034 17188 TTNQKKALK True NCI_RA007_Epitope_Rep3 1030.6134933707797 1030.6123899358602 75.502 2 -2.701018822715539 0.46132693100931793 1.0 ['nc|ENSG00000167491|Q86YP4-2|GATAD2A', 'nc|ENSG00000167491|Q86YP4|GATAD2A', 'ENSG00000167491|ENST00000683918|GATAD2A'] 85176 26705 QKDHFKSQ True NCI_RA007_Epitope_Rep5 1016.5039429218 1016.50284993586 110.43 2 -2.7016286447917928 0.46134320465362244 1.0 ['ENSG00000255009|ENST00000530464|UBTFL1'] 116388 23152 TWARKVLV True H1975_Epitope_Rep3 971.5916357273899 971.59052993586 96.681 2 -2.7027841045960703 0.461359477953697 1.0 ['ENSG00000133030|ENST00000651222|MPRIP'] 20191 20958 ENSKCYSS True NCI_RA007_Epitope_Rep5 916.35964675688 916.35854993586 87.623 2 -2.7041765304023078 0.4614139918565914 1.0 ['Tigger1_dup3188|chr4:76920080-76921080:-|1.2529691912903969|0.285655789289939|2.13|501.0|1|1|sense'] 3739 25563 AGSVPHKK True PC9_epitope_Rep1 822.47118624154 822.47008993586 103.34 2 -2.704583851275487 0.4614139918565914 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 52068 22668 KLKKNKKNSH True PC9_epitope_Rep4 1223.74623887583 1223.7451499358601 95.421 2 -2.704691192770778 0.4614139918565914 1.0 ['nc|ENSG00000116127|Q8TCU4-2|ALMS1', 'ALMS1|p.Q2060Pfs*2|1|0.14|ENSG00000116127|chr2:73452706-73452717|AGCAGTTGCCAG/C|frameshift_variant', 'ENSG00000116127|ENST00000613296|ALMS1', 'ENST00000450720.5_1_2:73899456-73899975:+|nuORF'] 90958 26650 RLGGGSSR True H1975_Epitope_Rep3 788.42529867828 788.42420993586 111.29 2 -2.7055244886593335 0.4614139918565914 1.0 ['nc|ENSG00000072778|P49748-2|ACADVL', 'ENSG00000072778|ENST00000356839|ACADVL', 'ENST00000578269.5_1_17:7123303-7123672:+|nuORF', 'ENST00000581562.5_1_17:7123303-7125294:+|nuORF', 'ENST00000577191.5_1_17:7123303-7125473:+|nuORF', 'ENST00000582056.5_1_17:7123303-7124179:+|nuORF'] 80969 19810 PNHQTPME True NCI_RA007_Epitope_Rep5 952.4072656556399 952.40616993586 83.11 2 -2.7062892891313455 0.46143595926266695 1.0 ['ENSG00000126249|ENST00000246535|PDCD2L'] 27617 26253 FPVEDVAKKS True PC9_epitope_Rep4 1118.5971746002997 1118.5960699358602 111.32 2 -2.7065439125973816 0.46143595926266695 1.0 ['nc|ENSG00000154040|O75952-5|CABYR', 'ENSG00000154040|ENST00000399496|CABYR'] 68750 20915 LVDMAKKL True H1975_Epitope_Rep2 916.54157430048 916.54046993586 86.585 2 -2.707373196401536 0.46146280589690986 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 52699 25042 KQKIQNNKNH True PC9_epitope_Rep6 1250.68436689526 1250.6832699358602 111.33 2 -2.7082211147138624 0.46146525104691005 1.0 ['ENSG00000180346|ENST00000603357|TIGD2'] 87983 18604 QVRGPLHLR True H1975_Epitope_Rep3 1074.6410455312998 1074.6399499358602 78.02 2 -2.7090704831636128 0.46146525104691005 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 29078 9361 FTQADSKESR True PC9_epitope_Rep1 1167.5520153130299 1167.55036490379 40.864 3 -2.710066380678789 0.46146525104691005 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'nc|ENSG00000131018|Q8NF91-11|SYNE1', 'nc|ENSG00000131018|Q8NF91-3|SYNE1', 'nc|ENSG00000131018|Q8NF91-9|SYNE1', 'ENST00000460912.6_1_6:152443573-152489284:-|nuORF', 'ENST00000478916.5_1_6:152456172-152464916:-|nuORF'] 88782 13510 RDLYAFYPLL True NCI_RA007_Epitope_Rep3 1269.6757592741699 1269.67466993586 60.43 2 -2.710197984440392 0.46146525104691005 1.0 ['ENSG00000198626|ENST00000366574|RYR2', 'nc|ENSG00000198626|Q92736-2|RYR2', 'RYR2|p.W3587Cfs*14|1|0.26|ENSG00000198626|chr1:237727121-237727121|G/-|frameshift_variant'] 31021 13040 GAVGAAFH True NCI_RA007_Epitope_Rep2 728.3605731634 728.36002496793 55.349 1 -2.710374437264825 0.46146525104691005 1.0 ['ENST00000515519.5_1_5:148442977-148443214:+|nuORF'] 10391 22171 CLAAGRQI True H1975_Epitope_Rep3 830.4432572415401 830.44214993586 92.718 2 -2.7112732608620727 0.46146525104691005 1.0 ['ABCB1|p.G1114Afs*33|1|0.14|ENSG00000085563|chr7:87509423-87509423|C/-|frameshift_variant', 'ENSG00000085563|ENST00000622132|ABCB1', 'ABCB1|p.D642Mfs*21|1|0.19|ENSG00000085563|chr7:87544964-87544964|A/-|frameshift_variant'] 92652 26402 RRFPKKWERPV True PC9_epitope_Rep5 1497.8680853440098 1497.8664449037901 107.44 3 -2.7117781552745286 0.4614709459102205 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 90566 19433 RKGIMKIMV True NCI_RA007_Epitope_Rep5 1074.6405771491 1074.63946993586 81.636 2 -2.7140956817309987 0.4615254470280959 1.0 ['ENSG00000130772|ENST00000373842|MED18'] 38980 19702 HKAGKQGK True PC9_epitope_Rep6 852.4929843152798 852.49188993586 88.44 2 -2.7143568100675517 0.4615254470280959 1.0 ['nc|ENSG00000266074|Q9P281|BAHCC1', 'ENSG00000266074|ENST00000675386|BAHCC1'] 11408 6274 DFLFGNIRELY True H1975_Epitope_Rep2 1385.6979512707298 1385.6968499358602 29.078 2 -2.7146157381575997 0.4615254470280959 1.0 ['nc|ENSG00000053524|Q86YR7-4|MCF2L2', 'ENSG00000053524|ENST00000328913|MCF2L2', 'nc|ENSG00000053524|Q86YR7-2|MCF2L2'] 6166 12272 APPLLLFF True NCI_RA007_Epitope_Rep3 916.54222592348 916.54112993586 55.427 2 -2.7148322949053925 0.4615254470280959 1.0 ['ENST00000245479.2_1_17:70117265-70117388:+|nuORF'] 38679 3267 HHRRELVFWSD True PC9_epitope_Rep5 1480.7323797168397 1480.73074490379 17.623 3 -2.7158432749937544 0.46152626069302427 1.0 ['ENSG00000134569|ENST00000378623|LRP4', 'LRP4|p.W963Cfs*12|1|0.19|ENSG00000134569|chr11:46879241-46879241|C/-|frameshift_variant'] 83926 23182 QEKLDAFF True H1975_Epitope_Rep1 996.4916469025999 996.49054993586 96.373 2 -2.7163176481977107 0.46152626069302427 1.0 ['ENSG00000160505|ENST00000301295|NLRP4', 'nc|ENSG00000160505|Q96MN2-2|NLRP4', 'nc|ENSG00000160505|Q96MN2-3|NLRP4'] 40535 24911 HSPPSTLV True PC9_epitope_Rep2 836.4392174069201 836.43812993586 101.48 2 -2.7190851772995828 0.4615750629136972 1.0 ['ENSG00000176619|ENST00000325327|LMNB2'] 56329 5742 LDRESQAA True PC9_epitope_Rep2 888.4301092751998 888.42900993586 27.478 2 -2.7192982869074633 0.4615750629136972 1.0 ['nc|ENSG00000136099|O95206-2|PCDH8', 'ENSG00000136099|ENST00000377942|PCDH8'] 3412 10733 AGKKHGGL True NCI_RA007_Epitope_Rep5 766.4449714936998 766.4444249679301 47.926 1 -2.7194505188755422 0.4615750629136972 1.0 ['ENSG00000188910|ENST00000373366|GJB3'] 83828 8147 QEEYGEEQILQ True PC9_epitope_Rep4 1364.6095897587998 1364.60848993586 38.791 2 -2.719896127462936 0.4615807560137457 1.0 ['nc|ENSG00000150510|Q86V42-2|FAM124A', 'nc|ENSG00000150510|Q86V42-3|FAM124A', 'ENSG00000150510|ENST00000322475|FAM124A'] 133442 16698 WGGRGGLM True NCI_RA007_Epitope_Rep3 832.4013924295599 832.40028993586 73.496 2 -2.72061276540968 0.4615864489934021 1.0 ['ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 112806 2822 TPLSAAAHTH True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 15.754 2 -2.7214046925401036 0.4616084078749815 1.0 ['nc|ENSG00000077380|Q13409-6|DYNC1I2', 'nc|ENSG00000077380|Q13409-3|DYNC1I2', 'nc|ENSG00000077380|Q13409-7|DYNC1I2', 'nc|ENSG00000077380|Q13409-2|DYNC1I2', 'nc|ENSG00000077380|Q13409-5|DYNC1I2', 'ENSG00000077380|ENST00000397119|DYNC1I2', 'ENST00000479806.1_1_2:172583261-172604396:+|nuORF', 'ENST00000435916.1_1_10:52025510-52026503:+|nuORF', 'nc|ENSG00000158560|O14576|DYNC1I1', 'nc|ENSG00000158560|O14576-5|DYNC1I1', 'ENSG00000158560|ENST00000447467|DYNC1I1', 'nc|ENSG00000158560|O14576-4|DYNC1I1', 'nc|ENSG00000158560|O14576-3|DYNC1I1'] 82220 23576 PTHPSLLT True H1975_Epitope_Rep3 864.4705175352 864.46942993586 98.36 2 -2.721577939390377 0.4616084078749815 1.0 ['ENST00000514636.1_1_6:33747875-33752267:-|nuORF'] 65579 18739 LSGHDPKR True PC9_epitope_Rep6 908.4828135544 908.48170993586 84.72 2 -2.7219750132514706 0.4616246735533258 1.0 ['HERVK-int_dup102|chr7:4583489-4590929:-|1.1194352082830012|0.4463608682754711|1.33|491.0|137|3|sense'] 126660 23046 VPQYRAILWRK True PC9_epitope_Rep6 1428.8353882333997 1428.8342899358602 101.74 2 -2.7229399493001933 0.4616303531973825 1.0 ['nc|ENSG00000136895|Q5VVW2-2|GARNL3', 'nc|ENSG00000136895|Q5VVW2-5|GARNL3', 'ENSG00000136895|ENST00000373387|GARNL3', 'nc|ENSG00000136895|Q5VVW2-3|GARNL3'] 96206 4707 SEEKGAAL True PC9_epitope_Rep4 803.4024975450299 803.40140993586 24.651 2 -2.72327426371684 0.4616303531973825 1.0 ['nc|ENSG00000289701|Q9H257-2|CARD9', 'ENSG00000187796|ENST00000371732|CARD9', 'ENST00000556340.1_1_9:139265151-139266545:-|nuORF', 'nc|ENSG00000289701|Q9H257-3|CARD9'] 127932 22519 VRPLERRKY True PC9_epitope_Rep2 1215.72002412799 1215.71836490379 92.11 3 -2.724380857217378 0.4616303531973825 1.0 ['ENSG00000160396|ENST00000291823|HIPK4'] 124114 23863 VKVILDKY True NCI_RA007_Epitope_Rep3 976.5957180483199 976.59516496793 103.39 1 -2.7247144876272555 0.4616303531973825 1.0 ['nc|ENSG00000137648|Q9NRS4-4|TMPRSS4'] 133443 16779 WGGRGGLM True NCI_RA007_Epitope_Rep3 832.4013924295599 832.40028993586 73.849 2 -2.7255290491191073 0.4616303531973825 1.0 ['ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 93301 21280 RRRYLRRKER True NCI_RA007_Epitope_Rep2 1487.9021794369498 1487.90108993586 88.031 2 -2.725970864376619 0.4616303531973825 1.0 ['ENSG00000284188|ENST00000640271|unknown'] 23509 4989 EWKQFHHLCYW True H1975_Epitope_Rep3 1575.70813911495 1575.7070499358601 24.319 2 -2.7270237081549005 0.4616303531973825 1.0 ['nc|ENSG00000155158|Q5VTQ0-5|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-2|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-6|TTC39B', 'ENSG00000155158|ENST00000512701|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-3|TTC39B', 'nc|ENSG00000155158|Q5VTQ0-4|TTC39B', 'nc|ENSG00000155158|Q5VTQ0|TTC39B', 'ENST00000505732.5_1_9:15186859-15307321:-|nuORF'] 52039 24001 KLHDKTAV True NCI_RA007_Epitope_Rep3 910.52361573722 910.52250993586 103.97 2 -2.7273470513271407 0.4616303531973825 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant'] 32427 23541 GGGRSLIK True NCI_RA007_Epitope_Rep2 786.47118624154 786.47008993586 98.64 2 -2.7274544540873418 0.4616303531973825 1.0 ['ENSG00000188112|ENST00000341865|C6orf132'] 102082 7442 SPPTKSKL True PC9_epitope_Rep5 856.50181766348 856.50072993586 33.58 2 -2.7276360048030592 0.4616303531973825 1.0 ['nc|ENSG00000157927|Q96JH8-1|RADIL', 'ENSG00000157927|ENST00000399583|RADIL'] 52061 24642 KLKGSPVI True NCI_RA007_Epitope_Rep2 840.5432885526399 840.54274496793 103.6 1 -2.7280201948817715 0.4616303531973825 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant', 'TTN|p.P7413Hfs*4|1|0.22|ENSG00000155657|chr2:178720573-178720573|G/-|frameshift_variant', 'TTN|p.T6964Nfs*12|1|0.33|ENSG00000155657|chr2:178723165-178723166|-/T|frameshift_variant', 'TTN|p.C6714Afs*20|1|0.3|ENSG00000155657|chr2:178724284-178724284|A/-|frameshift_variant', 'TTN|p.N5683Kfs*48|1|0.24|ENSG00000155657|chr2:178730533-178730534|-/T|frameshift_variant'] 52633 16632 KQEEVLRK True NCI_RA007_Epitope_Rep3 1028.5978433066398 1028.59674993586 73.204 2 -2.728054858240141 0.4616303531973825 1.0 ['DICER1|p.D1734Pfs*26|1|0.38|ENSG00000100697|chr14:95094040-95094053|CAGACCGCAGGTCT/-|frameshift_variant', 'nc|ENSG00000100697|Q9UPY3-2|DICER1', 'ENSG00000100697|ENST00000343455|DICER1'] 76866 25541 NVIFVLRKV True PC9_epitope_Rep3 1086.6913497686598 1086.69024993586 103.72 2 -2.728504549418729 0.4616303531973825 1.0 ['VSTM1|p.T57I|1|0.26|ENSG00000189068|chr19:54058491-54058491|G/A|missense_variant'] 74297 24606 NIIQKHAQANG True NCI_RA007_Epitope_Rep1 1192.63126869324 1192.63016993586 101.91 2 -2.7288284965541463 0.4616303531973825 1.0 ['ENSG00000164024|ENST00000296411|METAP1'] 52329 24484 KPCFYKKLQKL True PC9_epitope_Rep4 1394.8108132783398 1394.8097099358602 102.66 2 -2.729070373384767 0.46163116443786667 1.0 ['AluJb_dup92890|chr14:64941062-64941363:-|1.0101707983900805|0.2068277339241644|2.29|488.0|6|2|sense'] 130911 23310 VVHSALLA True NCI_RA007_Epitope_Rep3 808.48068829608 808.47958993586 101.24 2 -2.72908876396287 0.46163116443786667 1.0 ['ENSG00000104442|ENST00000276569|ARMC1'] 70685 12173 MDKDGYFWFVA True PC9_epitope_Rep5 1377.60635938501 1377.6052699358602 51.813 2 -2.729272804158901 0.4616319756440479 1.0 ['ENSG00000005187|ENST00000289416|ACSM3'] 97469 22151 SGKAHLRA True PC9_epitope_Rep6 838.47733425114 838.47622993586 98.145 2 -2.7293613193075776 0.4616319756440479 1.0 ['ENSG00000183128|ENST00000369783|CALHM3'] 53180 15397 KSTTKAAK True NCI_RA007_Epitope_Rep4 833.4970666362099 833.49596993586 66.898 2 -2.729943153272969 0.46163766675828244 1.0 ['nc|ENSG00000134242|Q9Y2R2-6|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-2|PTPN22', 'ENST00000484147.5_1_1:114375712-114414257:-|nuORF', 'nc|ENSG00000134242|Q9Y2R2-4|PTPN22', 'nc|ENSG00000134242|Q9Y2R2|PTPN22', 'ENSG00000134242|ENST00000359785|PTPN22', 'nc|ENSG00000134242|Q9Y2R2-3|PTPN22'] 112888 20034 TPPPGLGF True H1975_Epitope_Rep1 784.41194002992 784.41084993586 83.375 2 -2.7302778189630796 0.4616433577521961 1.0 ['ENSG00000109686|ENST00000604030|SH3D19'] 11994 4931 DHWYETDPR True PC9_epitope_Rep6 1217.51015050105 1217.50904993586 26.533 2 -2.730602910541105 0.4616490486257928 1.0 ['nc|ENSG00000152154|Q8NBL3-2|TMEM178A', 'ENSG00000152154|ENST00000281961|TMEM178A'] 126059 17384 VPATTPAPI True PC9_epitope_Rep5 865.4909186266099 865.49037496793 71.868 1 -2.7322420182604086 0.46167017217507106 1.0 ['ENSG00000283439|ENST00000636696|SPEM3'] 29846 24899 FVVLIVPM True PC9_epitope_Rep2 916.54559705176 916.54448993586 101.44 2 -2.732817365583448 0.46167017217507106 1.0 ['ENSG00000277161|ENST00000614443|PIGW'] 40636 20034 HTGGRGKL True PC9_epitope_Rep6 824.461684187 824.46058993586 89.728 2 -2.73309955968025 0.46167017217507106 1.0 ['ENST00000597953.1_1_3:142719968-142720172:-|nuORF'] 90589 22101 RKIHDAAG True PC9_epitope_Rep6 866.4722488706998 866.47114993586 97.953 2 -2.735725668859467 0.46167017217507106 1.0 ['nc|ENSG00000113108|O95704-3|APBB3', 'nc|ENSG00000113108|O95704-2|APBB3', 'ENSG00000113108|ENST00000357560|APBB3', 'nc|ENSG00000113108|O95704-4|APBB3', 'ENST00000506165.1_1_5:139943324-139943944:-|nuORF', 'nc|ENSG00000113108|O95704-5|APBB3', 'nc|ENSG00000113108|O95704-6|APBB3'] 122778 13934 VGVGSHAA True H1975_Epitope_Rep2 696.3554877829599 696.35493496793 58.746 1 -2.7368073749492168 0.46167017217507106 1.0 ['ENSG00000223591|ENST00000602548|CENPVL1', 'ENSG00000283093|ENST00000634648|CENPVL2', 'ENSG00000224109|ENST00000417339|CENPVL3'] 133742 23213 WLLGLSRV True PC9_epitope_Rep1 942.56508662638 942.56398993586 94.088 2 -2.736892027748597 0.46167017217507106 1.0 ['ENST00000479915.5_1_7:76129456-76134915:+|nuORF'] 82949 23170 PWRLYKWG True PC9_epitope_Rep6 1104.58688470012 1104.58578993586 102.22 2 -2.737356064194813 0.46167017217507106 1.0 ['ENST00000428865.2_1_6:74404306-74404579:-|nuORF'] 39049 25340 HKRYKIQKKVR True PC9_epitope_Rep5 1482.9259345732999 1482.92482993586 102.67 2 -2.7387811645645606 0.46167017217507106 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 48304 7806 KDMSTERDFFM True H1975_Epitope_Rep2 1405.60062238157 1405.5995299358601 34.974 2 -2.738866087268133 0.46167017217507106 1.0 ['ENSG00000116016|ENST00000263734|EPAS1'] 3410 10373 AGKKHGGL True NCI_RA007_Epitope_Rep3 766.4449714936998 766.4444249679301 47.86 1 -2.7389235817005657 0.46167017217507106 1.0 ['ENSG00000188910|ENST00000373366|GJB3'] 93218 23744 RRRRRRLLFW True PC9_epitope_Rep1 1513.9330856424099 1513.9319899358602 96.124 2 -2.7391205830072067 0.46167017217507106 1.0 ['nc|ENSG00000100918|O95072-2|REC8', 'ENSG00000100918|ENST00000611366|REC8'] 125144 26627 VLPSQIQHQ True H1975_Epitope_Rep2 1048.56654317836 1048.5654499358602 109.68 2 -2.7391210792152054 0.46167017217507106 1.0 ['nc|ENSG00000112137|Q9C0D0-2|PHACTR1', 'ENSG00000112137|ENST00000332995|PHACTR1'] 124760 24203 VLKLKKLV True NCI_RA007_Epitope_Rep5 939.68447348307 939.68392496793 100.51 1 -2.7400834279205775 0.46167017217507106 1.0 ['ENSG00000157601|ENST00000398598|MX1', 'nc|ENSG00000157601|P20591-2|MX1'] 32539 23828 GGSKGLVR True PC9_epitope_Rep3 772.4555361774 772.45442993586 96.941 2 -2.741072269423144 0.46168724105859477 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'nc|ENSG00000149527|O75038-5|PLCH2'] 78613 24922 PDSPAMCL True H1975_Epitope_Rep2 832.34591126904 832.3453649679301 102.44 1 -2.742491581444835 0.46168724105859477 1.0 ['ENST00000513372.5_1_4:2256680-2256926:-|nuORF'] 79887 16836 PILMVFCA True H1975_Epitope_Rep3 892.4550677952 892.45396993586 70.311 2 -2.7427823314922857 0.46168724105859477 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-3|ABCC12', 'nc|ENSG00000140798|Q96J65-4|ABCC12'] 99870 26214 SLHHHCDC True NCI_RA007_Epitope_Rep2 950.3487052337 950.3481549679301 111.34 1 -2.744351733011878 0.461698619712951 1.0 ['ENST00000379540.7_1_9:33370017-33370257:+|nuORF'] 117606 18784 VAGSRARL True PC9_epitope_Rep3 828.49298431528 828.49188993586 77.473 2 -2.7449489795270763 0.461698619712951 1.0 ['ENST00000423007.5_1_9:134378335-134378638:+|nuORF'] 78215 22950 PAPRMPLP True PC9_epitope_Rep2 877.4843937775299 877.48328993586 93.77 2 -2.7479438325654337 0.4617571523689745 1.0 ['ENSG00000113615|ENST00000398844|SEC24A', 'SEC24A|p.G557Efs*9|1|0.36|ENSG00000113615|chr5:134688246-134688255|GTCTTCAGGA/-|frameshift_variant', 'nc|ENSG00000113615|O95486-2|SEC24A'] 51850 24964 KKLPMFLG True PC9_epitope_Rep2 932.5517450613598 932.55064993586 101.69 2 -2.749281775485119 0.4617839780173325 1.0 ['ENST00000274140.9_1_5:10436866-10436944:+|nuORF'] 34341 2820 GPSHRHQGH True H1975_Epitope_Rep2 1011.4747084821902 1011.4736099358599 14.915 2 -2.749908849407135 0.46180023462022174 1.0 ['ENSG00000130528|ENST00000252825|HRC'] 134086 23495 WQRKKRKDPLV True NCI_RA007_Epitope_Rep3 1452.8677509908398 1452.86664993586 101.95 2 -2.7521980774846946 0.4618441215323646 1.0 ['ENST00000477392.1_1_7:150130835-150139740:+|nuORF'] 97856 15969 SHKCAFAG True NCI_RA007_Epitope_Rep2 819.3697579481099 819.36866993586 66.831 2 -2.7522165699880037 0.4618441215323646 1.0 ['nc|ENSG00000051825|Q99550-2|MPHOSPH9'] 98605 22664 SINQLTAA True PC9_epitope_Rep3 816.4341320264799 816.43302993586 92.449 2 -2.7523294439617594 0.4618441215323646 1.0 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 30931 19364 GASGHPPI True H1975_Epitope_Rep1 734.3711378471 734.3705849679301 80.667 1 -2.752475852170652 0.4618441215323646 1.0 ['ENST00000485673.5_1_20:57464182-57464599:+|nuORF'] 13070 15719 DLRRRDYHMER True PC9_epitope_Rep5 1545.7582771948498 1545.75716993586 65.466 2 -2.7535314990846143 0.46184573439431886 1.0 ['nc|ENSG00000225697|Q9BXS9-7|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-2|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-3|SLC26A6', 'ENSG00000225697|ENST00000395550|SLC26A6', 'ENST00000482282.5_1_3:48670520-48671236:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-5|SLC26A6', 'nc|ENSG00000225697|Q9BXS9-4|SLC26A6', 'ENST00000489483.5_1_3:48670389-48671049:-|nuORF', 'nc|ENSG00000225697|Q9BXS9-6|SLC26A6'] 3411 10606 AGKKHGGL True NCI_RA007_Epitope_Rep4 766.4449714936998 766.4444249679301 47.638 1 -2.7538606383788222 0.46184573439431886 1.0 ['ENSG00000188910|ENST00000373366|GJB3'] 92362 21975 RQPVVIYS True NCI_RA007_Epitope_Rep3 960.53926580136 960.53816993586 95.474 2 -2.7540038927462036 0.46184573439431886 1.0 ['nc|ENSG00000095321|P43155-3|CRAT', 'ENSG00000095321|ENST00000318080|CRAT', 'nc|ENSG00000095321|P43155-2|CRAT'] 105190 21142 STPCKNGA True PC9_epitope_Rep5 776.34868815036 776.34758993586 86.382 2 -2.7541341617612765 0.46184573439431886 1.0 ['NOTCH1|p.D1267Mfs*178|1|0.6|ENSG00000148400|chr9:136506818-136506818|C/-|frameshift_variant', 'NOTCH1|p.G1165Qfs*13|1|0.54|ENSG00000148400|chr9:136507959-136507972|CAGGAGTAGCCGCC/-|frameshift_variant', 'NOTCH1|p.S1152Afs*27|1|0.33|ENSG00000148400|chr9:136508015-136508015|T/-|frameshift_variant', 'NOTCH1|p.G925Afs*254|1|0.3|ENSG00000148400|chr9:136509928-136509928|C/-|frameshift_variant', 'NOTCH1|p.A973Qfs*206|1|0.27|ENSG00000148400|chr9:136509786-136509786|G/-|frameshift_variant', 'ENSG00000148400|ENST00000651671|NOTCH1'] 65726 19553 LSHSWGRETK True PC9_epitope_Rep5 1199.60471959223 1199.60362993586 80.264 2 -2.7562518216389047 0.4618571081358117 1.0 ['PRAG1|p.R902Kfs*70|1|0.16|ENSG00000275342|chr8:8328077-8328078|-/T|frameshift_variant', 'PRAG1|p.G1341Afs*17|1|0.31|ENSG00000275342|chr8:8318353-8318353|C/-|frameshift_variant', 'ENSG00000275342|ENST00000615670|PRAG1'] 52364 22387 KPGERKKT True PC9_epitope_Rep2 942.5610638750999 942.55996993586 91.607 2 -2.757224684476143 0.4618571081358117 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 66270 8138 LSQEKNDL True PC9_epitope_Rep3 945.4767251144499 945.47562993586 36.282 2 -2.758854947532852 0.4618839293262321 1.0 ['nc|ENSG00000002079|Q9H6N6|MYH16'] 110787 23449 TKPRKEKT True PC9_epitope_Rep2 986.5872786229398 986.58618993586 95.668 2 -2.759317279248027 0.4618904210915623 1.0 ['ENSG00000137440|ENST00000382333|FGFBP1'] 79674 24846 PHKRGLTKT True H1975_Epitope_Rep2 1036.6141620771198 1036.61306993586 102.14 2 -2.760550103377115 0.4618904210915623 1.0 ['E2F8|p.M18T|1|0.21|ENSG00000129173|chr11:19238095-19238095|A/G|missense_variant'] 61949 17848 LLLNRRSQ True PC9_epitope_Rep3 998.5985120129801 998.59740993586 73.848 2 -2.7607849597182277 0.4618904210915623 1.0 ['ENST00000323963.9_1_3:186507079-186507190:+|nuORF'] 137615 23031 YLVFWAFLLVF True PC9_epitope_Rep6 1416.78458144716 1416.7834899358602 101.69 2 -2.761730139441786 0.46189610718965296 1.0 ['ENSG00000130876|ENST00000253188|SLC7A10'] 45199 8944 IRIYIHMCLLW True PC9_epitope_Rep5 1459.78321863151 1459.78156490379 39.348 3 -2.7637662377520718 0.4619017931675772 1.0 ['nc|ENSG00000185013|Q96P26-4|NT5C1B', 'nc|ENSG00000185013|Q96P26|NT5C1B'] 35582 5229 GTISHIKS True NCI_RA007_Epitope_Rep1 841.4657665079301 841.46521496793 24.422 1 -2.764855673481489 0.4619131647629413 1.0 ['CUBN|p.R1579Gfs*21|2|0.21|ENSG00000107611|chr10:16954510-16954510|G/-|frameshift_variant', 'CUBN|p.E3207Rfs*14|1|0.2|ENSG00000107611|chr10:16851279-16851279|C/-|frameshift_variant', 'ENSG00000107611|ENST00000377833|CUBN'] 87984 19970 QVRGPLHLR True NCI_RA007_Epitope_Rep4 1074.6410455312998 1074.6399499358602 86.354 2 -2.7663704160300173 0.4619131647629413 1.0 ['ENST00000469093.1_1_9:137623973-137624162:+|nuORF'] 32614 20110 GHFCLCPL True NCI_RA007_Epitope_Rep4 888.39861554824 888.39750993586 87.002 2 -2.767358318921264 0.46192453587768517 1.0 ['ENST00000537771.1_1_11:73105464-73105626:+|nuORF'] 92373 24733 RQQILRRHLKN True NCI_RA007_Epitope_Rep5 1460.8800470100398 1460.8789499358602 102.62 2 -2.7676158531075163 0.46192453587768517 1.0 ['ENST00000361138.6_1_9:72897446-72901170:+|nuORF'] 90428 24369 RIPWATPHQ True PC9_epitope_Rep4 1104.58286194884 1104.5817699358602 102.22 2 -2.768546151110302 0.46193590651183924 1.0 ['ENST00000305123.5_1_2:227662067-227662256:-|nuORF'] 52513 22934 KPPKGWFR True PC9_epitope_Rep4 1014.5763200164199 1014.57522993586 96.436 2 -2.7692008749182513 0.46193590651183924 1.0 ['ENST00000546727.5_1_12:113545343-113557136:-|nuORF', 'ENST00000551051.5_1_12:113546023-113565713:-|nuORF', 'RASAL1|p.M351Ifs*22|1|0.16|ENSG00000111344|chr12:113115215-113115216|-/A|frameshift_variant', 'ENST00000548972.5_1_12:113545343-113573291:-|nuORF', 'ENST00000418411.6_1_12:113540888-113573291:-|nuORF', 'nc|ENSG00000111344|O95294-2|RASAL1', 'nc|ENSG00000111344|O95294|RASAL1', 'ENSG00000111344|ENST00000548055|RASAL1', 'nc|ENSG00000111344|O95294-3|RASAL1'] 127876 16899 VRPEAPRP True NCI_RA007_Epitope_Rep5 920.5191990631199 920.51810993586 71.759 2 -2.7716952424001415 0.46196272346899964 1.0 ['ENST00000503582.1_1_5:141703577-141703763:-|nuORF'] 123298 20974 VHSHDGVV True NCI_RA007_Epitope_Rep5 848.41406528824 848.41296993586 87.685 2 -2.77234112817153 0.461966742028863 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 80535 22873 PLLRKRWFQL True PC9_epitope_Rep4 1355.8190098932698 1355.81737490379 96.199 3 -2.7730716340675365 0.461966742028863 1.0 ['ENSG00000170092|ENST00000625065|SPDYE5', 'ENSG00000260097|ENST00000563237|SPDYE6', 'ENSG00000230358|ENST00000424157|SPDYE21'] 38276 24970 HFGFILLM True PC9_epitope_Rep2 976.52044493308 976.51934993586 101.71 2 -2.7732344799559394 0.461966742028863 1.0 ['nc|ENSG00000183960|Q96L42-2|KCNH8'] 49163 16713 KGPARQAK True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 71.051 2 -2.773421095150537 0.461966742028863 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 25690 25102 FFFLFPRRRRR True PC9_epitope_Rep1 1596.9266032796397 1596.9255099358602 101.44 2 -2.7740433943003864 0.461966742028863 1.0 ['ENST00000222747.7_1_7:120497939-120498116:-|nuORF'] 134403 22901 WTARVVHL True PC9_epitope_Rep6 980.55558457184 980.55448993586 101.2 2 -2.7741735977281277 0.461966742028863 1.0 ['ENSG00000196961|ENST00000354293|AP2A1', 'nc|ENSG00000196961|O95782|AP2A1', 'ENST00000600199.1_1_19:50270291-50299453:+|nuORF'] 79648 17076 PHGGSLHV True NCI_RA007_Epitope_Rep4 802.40858598498 802.40748993586 73.983 2 -2.7747953057388823 0.461966742028863 1.0 ['ENSG00000151615|ENST00000281321|POU4F2'] 81386 8762 PPTRRRQFR True PC9_epitope_Rep5 1212.6952063624797 1212.69355490379 38.645 3 -2.7753597048525065 0.461966742028863 1.0 ['ENSG00000085644|ENST00000396878|ZNF213', 'nc|ENSG00000085644|O14771-2|ZNF213', 'ENST00000576863.1_1_16:3188364-3191345:+|nuORF'] 49164 16811 KGPARQAK True NCI_RA007_Epitope_Rep5 854.5086343794198 854.50752993586 71.411 2 -2.775722379334853 0.461966742028863 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 20427 10086 EPPPCPPL True NCI_RA007_Epitope_Rep3 848.4102257777599 848.4096749679301 46.765 1 -2.775794254823256 0.461966742028863 1.0 ['ENST00000237455.4_1_2:86850525-86850729:-|nuORF'] 33670 6579 GLPPPTST True H1975_Epitope_Rep3 768.4017692690401 768.40122496793 30.261 1 -2.7774873654160954 0.4619992393509128 1.0 ['ENST00000534043.1_1_1:200971202-200971469:-|nuORF'] 87587 24986 QTQACPPL True H1975_Epitope_Rep2 856.4112884069199 856.41018993586 102.68 2 -2.7779469090277096 0.4619992393509128 1.0 ['nc|ENSG00000184216|P51617-4|IRAK1', 'nc|ENSG00000184216|P51617-2|IRAK1', 'nc|ENSG00000184216|P51617-3|IRAK1', 'ENSG00000184216|ENST00000369980|IRAK1', 'ENST00000477274.1_1_X:153276255-153284091:-|nuORF'] 94611 23731 RYKPREKL True NCI_RA007_Epitope_Rep3 1088.6454622053998 1088.6443699358601 102.87 2 -2.779259994582021 0.4620000422573898 1.0 ['ENSG00000140795|ENST00000394809|MYLK3', 'nc|ENSG00000140795|Q32MK0-4|MYLK3', 'nc|ENSG00000145949|Q86YV6-2|MYLK4', 'ENSG00000145949|ENST00000274643|MYLK4'] 79453 7965 PGPLSKQGS True PC9_epitope_Rep2 869.46068112749 869.45958993586 36.002 2 -2.779461295823752 0.4620000422573898 1.0 ['ENSG00000130726|ENST00000253024|TRIM28', 'nc|ENSG00000130726|Q13263-2|TRIM28', 'ENST00000601150.5_1_19:59059168-59060232:+|nuORF'] 60395 26346 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 107.59 3 -2.7800025603586134 0.4620057258158231 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 68952 23632 LVFVRKLM True NCI_RA007_Epitope_Rep3 1004.6204933275199 1004.61938993586 102.49 2 -2.7811139116826458 0.4620235781289614 1.0 ['ENSG00000033867|ENST00000454389|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-9|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-8|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-12|SLC4A7', 'SLC4A7|p.G1175Efs*11|1|0.32|ENSG00000033867|chr3:27383192-27383192|C/-|frameshift_variant', 'nc|ENSG00000033867|Q9Y6M7-13|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-6|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-2|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-3|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-4|SLC4A7', 'nc|ENSG00000033867|Q9Y6M7-5|SLC4A7', 'nc|ENSG00000144290|Q6U841-2|SLC4A10', 'nc|ENSG00000144290|Q6U841-3|SLC4A10', 'ENSG00000144290|ENST00000446997|SLC4A10', 'ENST00000446228.5_1_2:162758621-162834241:+|nuORF', 'ENST00000465487.5_1_3:27418257-27433320:-|nuORF'] 60394 26282 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 107.25 3 -2.781477517238755 0.4620235781289614 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 52372 22570 KPGERKKT True PC9_epitope_Rep5 942.5610638750999 942.55996993586 91.82 2 -2.781870703778168 0.4620235781289614 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 60701 24551 LIYCGRKLK True H1975_Epitope_Rep2 1092.6477707045199 1092.64666993586 100.98 2 -2.782198034447672 0.4620235781289614 1.0 ['ENSG00000138629|ENST00000395081|UBL7'] 119542 8552 VERCHCKY True PC9_epitope_Rep5 1036.45825568268 1036.4571499358601 37.839 2 -2.783167575633874 0.4620235781289614 1.0 ['ENSG00000085741|ENST00000322563|WNT11'] 49170 22587 KGPARQAK True PC9_epitope_Rep4 854.5086343794198 854.50752993586 95.115 2 -2.784534939904989 0.46202438045338345 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 60392 26132 LIIIKDLLLLI True PC9_epitope_Rep2 1278.8890465156999 1278.8874149037902 106.5 3 -2.784731098592009 0.46202438045338345 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 137904 17848 YPPFFLLL True NCI_RA007_Epitope_Rep5 1008.5684406713199 1008.56734993586 75.451 2 -2.785519763525874 0.4620406266175119 1.0 ['ENSG00000180974|ENST00000641726|OR52E4'] 133372 22568 WFKPTVLV True NCI_RA007_Epitope_Rep5 988.5745886809199 988.57348993586 93.991 2 -2.7869629266731137 0.4620414285563384 1.0 ['ENST00000399295.2_1_21:35747926-35748193:+|nuORF', 'ENST00000474455.1_1_21:35747923-35748208:+|nuORF'] 92699 24541 RRHPKPFR True PC9_epitope_Rep4 1092.6417142376397 1092.64060993586 102.88 2 -2.787244524958937 0.4620414285563384 1.0 ['ENSG00000175699|ENST00000636493|CCDC197'] 70139 23808 LYLATRDQ True H1975_Epitope_Rep3 978.51344497634 978.51234993586 99.285 2 -2.7886200314363423 0.462069839660308 1.0 ['ENST00000273859.7_1_4:47487394-47514558:+|nuORF'] 39543 23071 HPFVEVSF True NCI_RA007_Epitope_Rep5 960.4705175352 960.46942993586 95.989 2 -2.789831509424504 0.462069839660308 1.0 ['ENSG00000188649|ENST00000646931|CC2D2B'] 36342 22514 GVHDAPPP True PC9_epitope_Rep2 788.3817025308 788.38115496793 92.089 1 -2.790666674915334 0.462069839660308 1.0 ['ENST00000596700.5_1_19:50084718-50093643:+|nuORF', 'ENST00000597121.5_1_19:50086773-50093643:+|nuORF', 'ENSG00000126460|ENST00000246794|PRRG2'] 125146 26297 VLPSQIQHQ True H1975_Epitope_Rep3 1048.56654317836 1048.5654499358602 109.64 2 -2.7918170159706115 0.462069839660308 1.0 ['nc|ENSG00000112137|Q9C0D0-2|PHACTR1', 'ENSG00000112137|ENST00000332995|PHACTR1'] 71180 22864 MFHGIPAT True NCI_RA007_Epitope_Rep5 872.4214591678 872.42036993586 95.163 2 -2.7929061791675096 0.462069839660308 1.0 ['ENST00000527797.6_1_8:145651064-145652328:-|nuORF', 'ENSG00000160948|ENST00000292510|VPS28', 'nc|ENSG00000160948|Q9UK41-2|VPS28', 'ENST00000526977.5_1_8:145651442-145652328:-|nuORF'] 29535 25086 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 109.25 3 -2.793602032597151 0.46207552152099285 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 89894 25524 RFRLLHLRS True PC9_epitope_Rep3 1196.7254438615998 1196.72487496793 103.65 1 -2.79770621418534 0.46208032781691255 1.0 ['nc|ENSG00000048342|Q9P2K1-2|CC2D2A', 'ENSG00000048342|ENST00000424120|CC2D2A'] 71894 27217 MPPGIPPLM True PC9_epitope_Rep3 951.49218157991 951.49108993586 112.01 2 -2.79858193890133 0.46208032781691255 1.0 ['ENST00000577324.1_1_17:30677304-30687987:+|nuORF', 'nc|ENSG00000010244|O43670-3|ZNF207', 'nc|ENSG00000010244|O43670-2|ZNF207', 'nc|ENSG00000010244|O43670|ZNF207', 'ENSG00000010244|ENST00000394670|ZNF207'] 62631 26404 LLVPTEQR True PC9_epitope_Rep3 954.54983048506 954.54872993586 107.88 2 -2.7995533699601016 0.46208032781691255 1.0 ['ENSG00000283703|ENST00000686984|VSIG10L2'] 73655 15953 NGLKSLSA True H1975_Epitope_Rep2 788.43921740692 788.43812993586 66.561 2 -2.8002356495373064 0.46208032781691255 1.0 ['ENSG00000204351|ENST00000375394|SKIC2', 'ENST00000494058.5_1_6:31934804-31935971:+|nuORF', 'ENST00000461915.5_1_6:31934795-31936203:+|nuORF', 'ENST00000484835.1_1_6:31934891-31936687:+|nuORF'] 29617 11051 FVLLLLCP True NCI_RA007_Epitope_Rep4 916.54559705176 916.54448993586 49.379 2 -2.800668943586417 0.46208032781691255 1.0 ['ENST00000536845.6_1_15:48009643-48009772:+|nuORF'] 39046 25245 HKRYKIQKKVR True PC9_epitope_Rep1 1482.9259345732999 1482.92482993586 101.99 2 -2.8013405375625524 0.46208032781691255 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 102393 7005 SPVSRGSQE True PC9_epitope_Rep5 945.4515729957699 945.45046993586 31.912 2 -2.8013564687331596 0.46208032781691255 1.0 ['nc|ENSG00000151079|P17658|KCNA6'] 109263 20255 TGAKGKGG True PC9_epitope_Rep5 674.3711378470998 674.3705849679301 82.96 1 -2.8016882526827938 0.46208032781691255 1.0 ['ENST00000524717.5_1_11:96075672-96075822:-|nuORF'] 92382 28758 RQQRTQAHL True PC9_epitope_Rep1 1136.6162873354397 1136.6151899358601 119.47 2 -2.8021983198815157 0.46208032781691255 1.0 ['ENSG00000188959|ENST00000400613|C9orf152'] 19999 23456 EMHHSSSY True H1975_Epitope_Rep3 976.3708801469202 976.36978993586 97.894 2 -2.802803436042124 0.46208032781691255 1.0 ['SEMA6A|p.L818Afs*10|1|0.23|ENSG00000092421|chr5:116447253-116447255|AGG/T|frameshift_variant', 'ENSG00000092421|ENST00000343348|SEMA6A', 'nc|ENSG00000092421|Q9H2E6-2|SEMA6A'] 125834 25513 VNNKNLIP True PC9_epitope_Rep2 910.5236157372199 910.52250993586 103.82 2 -2.8028870090080726 0.46208032781691255 1.0 ['FUT9|p.D228N|1|0.17|ENSG00000172461|chr6:96203837-96203837|G/A|missense_variant'] 133445 17018 WGGRGGLM True NCI_RA007_Epitope_Rep4 832.4013924295599 832.40028993586 73.742 2 -2.8031929637697233 0.46208032781691255 1.0 ['ENST00000400979.2_1_1:166244929-166246012:-|nuORF'] 93496 25461 RSKRKGSA True PC9_epitope_Rep5 888.5253470727198 888.52424993586 103.17 2 -2.803876075862278 0.46208761035779156 1.0 ['nc|ENSG00000165304|Q14680-3|MELK', 'nc|ENSG00000165304|Q14680-4|MELK', 'nc|ENSG00000165304|Q14680-5|MELK', 'nc|ENSG00000165304|Q14680-2|MELK', 'nc|ENSG00000165304|Q14680-8|MELK', 'nc|ENSG00000165304|Q14680-7|MELK', 'nc|ENSG00000165304|Q14680-6|MELK', 'ENSG00000165304|ENST00000298048|MELK'] 33921 23038 GMEVGRWI True PC9_epitope_Rep6 946.4694719893798 946.46836993586 101.71 2 -2.804165927710035 0.46208761035779156 1.0 ['ENST00000521719.5_1_8:124526414-124553254:-|nuORF'] 38857 16894 HIGHTGHM True NCI_RA007_Epitope_Rep4 888.4024550587201 888.40134993586 73.212 2 -2.8044266713736263 0.46208761035779156 1.0 ['ABCC4|p.D1304G|1|0.41|ENSG00000125257|chr13:95021642-95021642|T/C|missense_variant'] 134447 23882 WTIFLFLRWVL True PC9_epitope_Rep1 1492.8594777229198 1492.85838993586 96.663 2 -2.8046228673761235 0.46208761035779156 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 52373 20803 KPGERKKT True PC9_epitope_Rep6 942.5610638750999 942.55996993586 92.788 2 -2.8048740865173825 0.46208761035779156 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 91193 17569 RLQLLEKMQPV True NCI_RA007_Epitope_Rep3 1353.78024142605 1353.77860490379 77.07 3 -2.8051789547875368 0.46209329095075663 1.0 ['nc|ENSG00000021574|Q9UBP0-3|SPAST', 'ENSG00000021574|ENST00000315285|SPAST'] 113107 24169 TQAKCCCT True NCI_RA007_Epitope_Rep2 856.3241302786399 856.32302993586 101.52 2 -2.805702452255476 0.46209897142374384 1.0 ['LTBP2|p.E1435K|1|0.45|ENSG00000119681|chr14:74505049-74505049|C/T|missense_variant'] 89769 23645 RFCVLVLELRW True PC9_epitope_Rep4 1432.8013112237998 1432.80020993586 99.294 2 -2.8066202746230067 0.4621160121228761 1.0 ['ENST00000548725.5_1_12:56553869-56554112:+|nuORF'] 128611 8862 VSKSQALA True NCI_RA007_Epitope_Rep4 802.4548674710599 802.45376993586 40.909 2 -2.807675977476827 0.4621160121228761 1.0 ['ANAPC1|p.G105V|1|0.19|ENSG00000153107|chr2:111878871-111878871|C/A|missense_variant'] 123156 24876 VHFPKLQLK True NCI_RA007_Epitope_Rep1 1108.6756997045197 1108.6746099358602 102.96 2 -2.807885361368444 0.4621160121228761 1.0 ['ENST00000266880.11_1_12:133417602-133417977:-|nuORF'] 13414 12590 DNLSLRHR True PC9_epitope_Rep5 1009.5417254128499 1009.54062993586 53.427 2 -2.811422352444861 0.46216393165642355 1.0 ['MKX|p.G56S|1|0.42|ENSG00000150051|chr10:27743250-27743250|C/T|missense_variant'] 125145 25577 VLPSQIQHQ True H1975_Epitope_Rep3 1048.56654317836 1048.5654499358602 106.43 2 -2.8127002644181514 0.4621752903907075 1.0 ['nc|ENSG00000112137|Q9C0D0-2|PHACTR1', 'ENSG00000112137|ENST00000332995|PHACTR1'] 124772 24098 VLKRKKKLKKK True PC9_epitope_Rep1 1396.0129586725495 1396.0118699358602 97.505 2 -2.812742891074264 0.4621752903907075 1.0 ['ENST00000372600.8_1_9:131679364-131679535:+|nuORF'] 138447 8193 YREWRRYYEVW True H1975_Epitope_Rep3 1704.8161093408 1704.8150099358602 36.494 2 -2.8156191600402805 0.46220776752338916 1.0 ['ENSG00000118017|ENST00000236709|A4GNT'] 136702 4361 YIHTYRHIYIC True PC9_epitope_Rep5 1480.72854020636 1480.72690490379 21.845 3 -2.816427911224067 0.46220776752338916 1.0 ['ENST00000415128.6_1_6:142623466-142692070:+|nuORF'] 61904 25504 LLLKSKVTA True PC9_epitope_Rep2 971.6379172134699 971.63736496793 103.78 1 -2.8175067401197404 0.46221344624774297 1.0 ['ENSG00000187954|ENST00000530374|ZFTRAF1', 'nc|ENSG00000291317|P0DTL6-2|ZFTRAF1', 'nc|ENSG00000291317|P0DTL6-1|ZFTRAF1'] 29940 21373 FWRFLFLHK True PC9_epitope_Rep6 1292.7182332228397 1292.7171299358602 95.086 2 -2.8197014393964777 0.46221584009967376 1.0 ['ENST00000519948.3_1_12:74934905-74935118:+|nuORF'] 92672 24782 RRGLHRRVRP True NCI_RA007_Epitope_Rep5 1301.80173711969 1301.80064993586 102.81 2 -2.820377755168507 0.46221584009967376 1.0 ['ENST00000472912.5_1_10:75633277-75634276:-|nuORF'] 93117 17820 RRRRAEWAGRK True NCI_RA007_Epitope_Rep3 1440.82868014352 1440.82702490379 78.138 3 -2.8227418878956865 0.46221584009967376 1.0 ['ENST00000262160.10_3_18:45423005-45423077:-|nuORF'] 80144 23627 PKPLKGERP True NCI_RA007_Epitope_Rep4 1020.6080140675199 1020.6074749679301 102.48 1 -2.8229119200120567 0.46221584009967376 1.0 ['ENSG00000171772|ENST00000343131|SYCE1'] 90964 20740 RLHIRGSG True PC9_epitope_Rep4 894.51478238902 894.51368993586 87.942 2 -2.8229231600321922 0.46221584009967376 1.0 ['ENST00000308027.6_1_17:6941984-6942116:+|nuORF'] 53744 24360 KYFAHIIK True NCI_RA007_Epitope_Rep5 1018.5963867546599 1018.59528993586 101.17 2 -2.8234929779519335 0.46221584009967376 1.0 ['nc|ENSG00000116337|Q01433-4|AMPD2', 'ENST00000526301.5_1_1:110162158-110172443:+|nuORF', 'nc|ENSG00000116337|Q01433-5|AMPD2', 'nc|ENSG00000116337|Q01433-2|AMPD2', 'ENSG00000116337|ENST00000528667|AMPD2'] 110803 20449 TKRALPNN True PC9_epitope_Rep6 912.51411368268 912.5130099358599 91.373 2 -2.824168809784391 0.4622215183190793 1.0 ['ENSG00000141510|ENST00000269305|TP53', 'TP53|p.K320Gfs*22|1|0.66|ENSG00000141510|chr17:7673560-7673570|AGTGGTTTCTT/C|frameshift_variant', 'nc|ENSG00000141510|P04637-3|TP53', 'TP53|p.S315Lfs*30|1|0.49|ENSG00000141510|chr17:7673586-7673586|G/-|frameshift_variant', 'nc|ENSG00000141510|P04637-2|TP53', 'nc|ENSG00000141510|P04637-4|TP53', 'nc|ENSG00000141510|P04637-6|TP53', 'nc|ENSG00000141510|P04637-7|TP53', 'nc|ENSG00000141510|P04637-5|TP53', 'nc|ENSG00000141510|P04637-9|TP53', 'nc|ENSG00000141510|P04637-8|TP53'] 54780 11882 LAETPKEEKAE True PC9_epitope_Rep5 1243.62959692739 1243.6284899358602 50.703 2 -2.828527879666565 0.4622807851086968 1.0 ['TUT1|p.Q564Tfs*71|1|0.25|ENSG00000149016|chr11:62576026-62576029|TCTG/-|frameshift_variant', 'ENSG00000149016|ENST00000476907|TUT1'] 127718 22621 VRHQQLRAP True PC9_epitope_Rep6 1103.63120912359 1103.6301099358602 100.06 2 -2.828911613201248 0.4622807851086968 1.0 ['ENST00000450849.6_2_19:3908308-3909516:+|nuORF'] 52278 15702 KNVNPGKR True NCI_RA007_Epitope_Rep3 911.5300980999899 911.52900993586 69.402 2 -2.829689388187632 0.4622807851086968 1.0 ['ENSG00000145794|ENST00000503335|MEGF10', 'ENST00000515622.1_1_5:126783361-126801299:+|nuORF'] 32680 12291 GHPGGWGA True PC9_epitope_Rep3 737.32452200785 737.3239749679301 52.304 1 -2.8308693413254025 0.4622831744422977 1.0 ['ENSG00000198914|ENST00000361360|POU3F3'] 123778 7452 VISRPGSN True NCI_RA007_Epitope_Rep2 828.44536541652 828.44426993586 33.613 2 -2.8318908474004245 0.4622831744422977 1.0 ['ENSG00000155530|ENST00000285928|LRGUK'] 49224 23758 KGRFLLLM True NCI_RA007_Epitope_Rep4 976.5891931992398 976.58808993586 103.0 2 -2.832332838383821 0.4622831744422977 1.0 ['ENST00000567744.5_1_15:65891231-65891273:-|nuORF'] 71898 20322 MPPWRQLRKQ True H1975_Epitope_Rep2 1338.7342942931398 1338.73318993586 84.214 2 -2.8324930427759423 0.4622831744422977 1.0 ['ENST00000370372.6_2_10:102045868-102046379:-|nuORF', 'ENST00000361832.2_1_10:102045868-102046416:-|nuORF'] 136684 26327 YIFGKFET True H1975_Epitope_Rep1 1003.5014833103099 1003.50097496793 109.4 1 -2.832586039583655 0.4622831744422977 1.0 ['ENSG00000039139|ENST00000265104|DNAH5', 'DNAH5|p.K3283Nfs*9|1|0.19|ENSG00000039139|chr5:13769008-13769008|T/-|frameshift_variant', 'DNAH5|p.R3314Pfs*24|1|0.17|ENSG00000039139|chr5:13766136-13766136|C/-|frameshift_variant', 'DNAH5|p.G3313Afs*25|1|0.11|ENSG00000039139|chr5:13766139-13766139|C/-|frameshift_variant', 'DNAH5|p.S2264Vfs*12|1|0.33|ENSG00000039139|chr5:13820398-13820398|G/-|frameshift_variant', 'DNAH5|p.I1442Nfs*2|1|0.12|ENSG00000039139|chr5:13865698-13865699|-/T|frameshift_variant', 'DNAH5|p.H1505Tfs*12|1|0.78|ENSG00000039139|chr5:13864481-13864481|C/-|frameshift_variant'] 29536 25160 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 109.61 3 -2.833409567276477 0.4622831744422977 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 110781 26749 TKNIIKYDLR True PC9_epitope_Rep5 1262.73467113262 1262.73356993586 109.14 2 -2.8342866793970605 0.4622994087837838 1.0 ['nc|ENSG00000185585|Q68BL7-3|OLFML2A', 'nc|ENSG00000185585|Q68BL7-2|OLFML2A', 'ENSG00000185585|ENST00000373580|OLFML2A'] 10366 21443 CITPKRRLTR True PC9_epitope_Rep3 1242.7342942931398 1242.73264490379 87.772 3 -2.8356771192689774 0.4623213192289014 1.0 ['ENST00000308736.6_1_12:125465364-125467084:-|nuORF'] 110789 17021 TKPSRLASK True NCI_RA007_Epitope_Rep3 986.58727862294 986.58618993586 74.813 2 -2.8360282092549887 0.4623213192289014 1.0 ['ENSG00000143294|ENST00000271526|PRCC'] 74452 25218 NKAKSKTL True NCI_RA007_Epitope_Rep5 888.53926580136 888.5387149679301 104.52 1 -2.8367766214244834 0.46232211477555846 1.0 ['chr19:15914387-15914762|302|16.38|0.92|4.16|-|ENST00000620614|CYP4F11,CYP4F11', 'ENSG00000171903|ENST00000402119|CYP4F11'] 5842 11597 APGHPGGH True H1975_Epitope_Rep3 728.3354210447201 728.3348749679301 49.739 1 -2.836805707872479 0.46232211477555846 1.0 ['ENST00000361361.6_1_1:155223944-155224582:-|nuORF'] 81966 5670 PSQQHAPV True PC9_epitope_Rep5 862.4297153523798 862.42860993586 26.807 2 -2.840271037710784 0.46238704501309014 1.0 ['ENST00000557743.2_1_14:89756667-89757087:-|nuORF'] 118063 11564 VATPGQVKE True PC9_epitope_Rep5 927.50254593947 927.50144993586 49.477 2 -2.8402939548667896 0.46238704501309014 1.0 ['ENSG00000013561|ENST00000394520|RNF14', 'nc|ENSG00000013561|Q9UBS8-2|RNF14'] 90467 23719 RIVELFVN True NCI_RA007_Epitope_Rep4 988.5705659296399 988.56946993586 102.85 2 -2.8403933347955577 0.46238704501309014 1.0 ['ENSG00000109323|ENST00000647097|MANBA', 'ENST00000514430.5_1_4:103590092-103612100:-|nuORF'] 13422 5595 DNMRTWKAD True PC9_epitope_Rep5 1135.50804232607 1135.5069499358601 26.524 2 -2.84061604737464 0.46238704501309014 1.0 ['nc|ENSG00000160219|Q8WWW8-3|GAB3', 'nc|ENSG00000160219|Q8WWW8|GAB3', 'ENSG00000160219|ENST00000424127|GAB3'] 14966 7156 DYRYLFQMHDE True H1975_Epitope_Rep1 1515.64526407487 1515.6441699358602 32.549 2 -2.8409476589156344 0.46239272028629036 1.0 ['ENST00000598723.5_1_19:53210029-53217273:-|nuORF'] 62175 25702 LLPKKPTA True PC9_epitope_Rep1 866.5589386167799 866.5583949679301 103.9 1 -2.8419914355601947 0.46240565788779225 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 125147 26595 VLPSQIQHQ True PC9_epitope_Rep3 1048.56654317836 1048.5654499358602 108.8 2 -2.843727925835555 0.46240565788779225 1.0 ['nc|ENSG00000112137|Q9C0D0-2|PHACTR1', 'ENSG00000112137|ENST00000332995|PHACTR1'] 102548 18970 SQALEKLGRL True NCI_RA007_Epitope_Rep2 1113.65060715549 1113.6495099358601 78.643 2 -2.8442282225903663 0.46240565788779225 1.0 ['nc|ENSG00000140553|Q9H3U1-2|UNC45A', 'ENSG00000140553|ENST00000418476|UNC45A', 'UNC45A|p.L422Afs*5|1|0.24|ENSG00000140553|chr15:90946677-90946678|CC/-|frameshift_variant', 'ENST00000557212.5_1_15:91479504-91485975:+|nuORF', 'ENST00000486253.1_1_15:91479504-91483847:+|nuORF', 'ENST00000553671.6_1_15:91478554-91486156:+|nuORF'] 61843 23505 LLLCRSSLVYL True PC9_epitope_Rep4 1278.7369796317398 1278.73588993586 98.715 2 -2.844649425422539 0.46240565788779225 1.0 ['chr14:58012150-58032884|335|10.01|0.03|8.51|-|1|TE_info:L1PA2,L1PA2_dup4307,L1,LINE,donor,+,58032884,58038561|ARMH4,None|23'] 38575 24596 HHGAEGVS True PC9_epitope_Rep1 792.35146503168 792.35036993586 99.473 2 -2.8447757875769843 0.46240565788779225 1.0 ['ENST00000546093.5_1_16:86580251-86588800:-|nuORF'] 107700 8698 TALLHNNRK True PC9_epitope_Rep5 1065.60432566941 1065.60322993586 38.398 2 -2.8453000685836614 0.46240565788779225 1.0 ['nc|ENSG00000150995|Q14643-4|ITPR1', 'nc|ENSG00000150995|Q14643-3|ITPR1', 'nc|ENSG00000150995|Q14643-8|ITPR1', 'nc|ENSG00000150995|Q14643-7|ITPR1', 'nc|ENSG00000150995|Q14643-5|ITPR1', 'nc|ENSG00000150995|Q14643-6|ITPR1', 'nc|ENSG00000150995|Q14643-2|ITPR1', 'ENSG00000150995|ENST00000649015|ITPR1', 'ENSG00000123104|ENST00000381340|ITPR2', 'ENSG00000096433|ENST00000605930|ITPR3'] 58373 23891 LEVKVVPK True NCI_RA007_Epitope_Rep4 910.5851533646198 910.58404993586 103.63 2 -2.846876306220454 0.46243402997677857 1.0 ['ENSG00000187764|ENST00000422704|SEMA4D'] 136820 21466 YITLRSKRSK True PC9_epitope_Rep6 1250.7459045226599 1250.74480993586 95.445 2 -2.8471687305426427 0.46243402997677857 1.0 ['ENSG00000164125|ENST00000585682|GASK1B', 'nc|ENSG00000164125|Q6UWH4-2|GASK1B', 'GASK1B|p.A253Hfs*22|1|0.23|ENSG00000164125|chr4:158170619-158170619|C/-|frameshift_variant', 'nc|ENSG00000164125|Q6UWH4-3|GASK1B'] 52489 24949 KPLRWHDALLL True PC9_epitope_Rep3 1360.79794009552 1360.79684993586 101.32 2 -2.847259940354584 0.46243402997677857 1.0 ['ENSG00000011028|ENST00000303375|MRC2'] 30505 23640 GAHDDSDD True PC9_epitope_Rep5 830.2678545470201 830.26730496793 95.911 1 -2.8473314496611994 0.46243402997677857 1.0 ['ENSG00000140623|ENST00000268231|SEPTIN12', 'nc|ENSG00000140623|Q8IYM1-2|SEPTIN12'] 65730 22754 LSHWHSRHHW True PC9_epitope_Rep3 1381.65406982649 1381.65296993586 92.79 2 -2.8474065882652075 0.46243402997677857 1.0 ['L1PA7_dup11190|chr14:30404509-30410867:-|4.239264443723659|0.2252305955007206|4.23|456.0|383|3|anti-sense'] 49559 25094 KKKAGPGS True PC9_epitope_Rep1 771.4602872046698 771.4597349679301 101.41 1 -2.8500055414660554 0.4624608142198203 1.0 ['nc|ENSG00000160208|Q14684-2|RRP1B', 'ENSG00000160208|ENST00000340648|RRP1B'] 90334 23514 RIGQGAAF True NCI_RA007_Epitope_Rep4 818.4398861132598 818.43878993586 102.03 2 -2.8505933455452896 0.46247216153172266 1.0 ['nc|ENSG00000188013|A8K0S8|MEIS3P2'] 62176 25505 LLPKKPTA True PC9_epitope_Rep2 866.5589386167799 866.5583949679301 103.79 1 -2.851020016225012 0.46247216153172266 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 13357 3798 DNAHCVWVI True PC9_epitope_Rep3 1055.48585032951 1055.48474993586 19.71 2 -2.8516579403238302 0.46248838976610657 1.0 ['nc|ENSG00000183117|Q96PZ7-3|CSMD1', 'nc|ENSG00000183117|Q96PZ7-2|CSMD1', 'CSMD1|p.I3493Ffs*8|1|0.24|ENSG00000183117|chr8:2942534-2942534|G/-|frameshift_variant', 'ENSG00000183117|ENST00000635120|CSMD1', 'CSMD1|p.G1065Efs*4|1|0.21|ENSG00000183117|chr8:3359265-3359265|C/-|frameshift_variant', 'nc|ENSG00000183117|Q96PZ7-4|CSMD1'] 117668 9563 VAKAGYLH True PC9_epitope_Rep5 857.47593726881 857.47484993586 41.742 2 -2.8521859524845445 0.4624948547183552 1.0 ['nc|ENSG00000087266|P78314-2|SH3BP2', 'ENST00000511663.5_1_4:2811506-2826487:+|nuORF', 'ENST00000511237.5_1_4:2795936-2826487:+|nuORF', 'ENST00000511185.5_1_4:2814082-2826487:+|nuORF', 'ENSG00000087266|ENST00000503393|SH3BP2', 'nc|ENSG00000087266|P78314-3|SH3BP2', 'nc|ENSG00000087266|P78314-4|SH3BP2'] 131487 25565 VVVAKPKG True PC9_epitope_Rep2 796.5170738047999 796.51596993586 104.02 2 -2.852216753705223 0.4624948547183552 1.0 ['PDILT|p.R364Lfs*5|1|0.18|ENSG00000169340|chr16:20369515-20369517|TGC/A|frameshift_variant', 'ENSG00000169340|ENST00000302451|PDILT'] 97715 22499 SHEESQKP True NCI_RA007_Epitope_Rep5 940.4250238947599 940.42392993586 93.719 2 -2.8525804989642647 0.4624948547183552 1.0 ['ENSG00000174948|ENST00000389740|GPR149'] 80211 13518 PLAKAAPK True PC9_epitope_Rep5 794.5014237406599 794.50032993586 57.019 2 -2.8533220657655165 0.4625005277156246 1.0 ['ENSG00000084463|ENST00000261167|WBP11'] 94084 17164 RVVVRIDS True NCI_RA007_Epitope_Rep3 942.5610638750999 942.55996993586 75.399 2 -2.855075103418821 0.46250857474539603 1.0 ['ENSG00000166938|ENST00000319212|DIS3L', 'DIS3L|p.K695Rfs*37|1|0.32|ENSG00000166938|chr15:66326243-66326243|A/-|frameshift_variant', 'nc|ENSG00000166938|Q8TF46-3|DIS3L', 'ENST00000564909.5_1_15:66585934-66618751:+|nuORF', 'nc|ENSG00000166938|Q8TF46-2|DIS3L', 'nc|ENSG00000166938|Q8TF46-4|DIS3L'] 117327 7554 VAAKNQQI True PC9_epitope_Rep2 870.4923156089399 870.49120993586 34.422 2 -2.8569667544644815 0.46250857474539603 1.0 ['nc|ENSG00000120694|Q92598-3|HSPH1', 'ENSG00000120694|ENST00000320027|HSPH1', 'nc|ENSG00000120694|Q92598-4|HSPH1', 'nc|ENSG00000120694|Q92598-2|HSPH1'] 10540 23518 CPPPCSSV True NCI_RA007_Epitope_Rep3 788.3196965212001 788.31858993586 102.04 2 -2.857560379449848 0.46250857474539603 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 80453 25498 PLKQLTVL True PC9_epitope_Rep2 910.5851533646199 910.5846049679301 103.76 1 -2.858104475786833 0.46250857474539603 1.0 ['ENSG00000161040|ENST00000440067|FBXL13', 'nc|ENSG00000161040|Q8NEE6-3|FBXL13', 'nc|ENSG00000161040|Q8NEE6-2|FBXL13', 'nc|ENSG00000161040|Q8NEE6|FBXL13'] 8686 23507 AVDAPWAH True H1975_Epitope_Rep1 865.4082516318099 865.40770496793 97.668 1 -2.859369095700317 0.46250857474539603 1.0 ['ENST00000337414.8_1_X:11683256-11683592:-|nuORF'] 128109 21990 VRRRMERRKEK True NCI_RA007_Epitope_Rep5 1542.90013083162 1542.8984849037902 91.718 3 -2.859538311211577 0.46250857474539603 1.0 ['ENST00000477976.5_1_1:892338-892489:-|nuORF'] 85668 26416 QLQQFDLWVL True PC9_epitope_Rep3 1288.6815729306 1288.6804699358602 107.93 2 -2.8598405429767366 0.46250857474539603 1.0 ['ENSG00000103023|ENST00000567164|PRSS54'] 10229 22306 CFHPEEAH True H1975_Epitope_Rep2 968.3810509078 968.3799499358599 92.183 2 -2.8645568561991515 0.4625474883917265 1.0 ['ENSG00000100106|ENST00000644935|TRIOBP', 'nc|ENSG00000100106|Q9H2D6-2|TRIOBP', 'TRIOBP|p.G34E|1|0.11|ENSG00000100106|chr22:37701466-37701466|G/A|missense_variant', 'TRIOBP|p.Y1000Gfs*7|1|0.37|ENSG00000100106|chr22:37725553-37725557|CTATG/-|frameshift_variant'] 122239 22597 VGRQEFSS True NCI_RA007_Epitope_Rep3 908.43519465564 908.43408993586 98.229 2 -2.8646561525948973 0.4625474883917265 1.0 ['ENST00000448841.5_1_10:104573746-104573887:+|nuORF'] 83373 23843 QARADPVP True PC9_epitope_Rep5 852.4453654165198 852.44426993586 96.693 2 -2.8655402135419266 0.4625474883917265 1.0 ['ENSG00000186143|ENST00000335524|PRR30'] 103902 3993 SRLVEWWAQER True NCI_RA007_Epitope_Rep2 1458.7367963909398 1458.73516490379 20.168 3 -2.8664115919691477 0.4625474883917265 1.0 ['ENSG00000215910|ENST00000688073|C1orf167', 'nc|nan|Q5SNV9-2|C1orf167', 'nc|nan|Q5SNV9-3|C1orf167'] 48156 19321 KARSCGEV True NCI_RA007_Epitope_Rep5 848.4174364165199 848.41632993586 81.194 2 -2.866513001522282 0.4625474883917265 1.0 ['ENSG00000183098|ENST00000377047|GPC6'] 64588 6254 LRECLDNR True PC9_epitope_Rep2 1017.5025630228099 1017.50146993586 29.453 2 -2.8683792830099653 0.4625482788459509 1.0 ['ENSG00000134996|ENST00000346234|OSTF1'] 133346 11968 WEYFKWQFRFS True H1975_Epitope_Rep1 1622.7670338900596 1622.7659299358602 51.039 2 -2.8686859674673815 0.4625482788459509 1.0 ['ENST00000470258.5_1_13:39622062-39622113:+|nuORF'] 29533 24567 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 106.68 3 -2.8690263891700654 0.4625645030233319 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 83925 21839 QEKHEVFE True H1975_Epitope_Rep2 1044.4876241513198 1044.48652993586 90.312 2 -2.87092534505371 0.46256608313020353 1.0 ['ENST00000498537.5_1_3:33094196-33138602:-|nuORF'] 123638 19956 VILPFMKY True NCI_RA007_Epitope_Rep2 1009.56706077233 1009.56596993586 82.625 2 -2.871620487854634 0.46256608313020353 1.0 ['ENSG00000153208|ENST00000295408|MERTK', 'TMEM87B-MERTK|2|fusion', 'TMEM87B-MERTK|1|fusion'] 123239 27013 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 110.11 2 -2.8717570732730358 0.46256608313020353 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 61479 4674 LLFLKLLKFV True PC9_epitope_Rep3 1232.82605233632 1232.82494993586 23.073 2 -2.8719072184819443 0.46256608313020353 1.0 ['ENST00000357033.8_1_X:33229490-33229556:-|nuORF'] 79541 2890 PGSEHIEML True H1975_Epitope_Rep3 1011.46953155903 1011.46842993586 15.351 2 -2.873432090210669 0.46256687313361966 1.0 ['ENST00000565460.1_1_16:68289553-68293557:+|nuORF', 'nc|ENSG00000103066|Q8NCC3-2|PLA2G15', 'ENSG00000103066|ENST00000219345|PLA2G15'] 90333 23526 RIGQGAAF True NCI_RA007_Epitope_Rep3 818.4398861132598 818.43878993586 102.07 2 -2.8741163444610947 0.46256687313361966 1.0 ['nc|ENSG00000188013|A8K0S8|MEIS3P2'] 85886 3262 QNKLLIIKK True PC9_epitope_Rep2 1096.73321458064 1096.73210993586 17.799 2 -2.875732526245155 0.46259364777883294 1.0 ['ENSG00000183354|ENST00000399933|KIAA2026'] 10534 16423 CPPPCSSV True H1975_Epitope_Rep2 788.3196965212001 788.31858993586 68.392 2 -2.8782145617745787 0.4626106591539785 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 138691 23316 YRTLVQKDLK True PC9_epitope_Rep6 1262.7346711326197 1262.73356993586 102.79 2 -2.8785245923680676 0.4626106591539785 1.0 ['ACSM4|p.M326T|1|0.36|ENSG00000215009|chr12:7320780-7320780|T/C|missense_variant'] 39103 16730 HLCKKKMR True NCI_RA007_Epitope_Rep5 1042.5892102825799 1042.58810993586 71.115 2 -2.8787669298020298 0.4626106591539785 1.0 ['nc|ENSG00000133107|Q9UBN4-5|TRPC4', 'TRPC4|p.Y706Ifs*18|1|0.09|ENSG00000133107|chr13:37639263-37639264|-/T|frameshift_variant', 'nc|ENSG00000133107|Q9UBN4-3|TRPC4', 'nc|ENSG00000133107|Q9UBN4-2|TRPC4', 'ENSG00000133107|ENST00000379705|TRPC4', 'ENST00000426868.6_1_13:38213370-38229407:-|nuORF', 'nc|ENSG00000133107|Q9UBN4-6|TRPC4'] 134923 2690 YAEDLERVF True PC9_epitope_Rep5 1140.54513902744 1140.54349490379 14.85 3 -2.8797183366101833 0.4626243656429031 1.0 ['ENSG00000165704|ENST00000298556|HPRT1'] 37346 6210 GVWHEHSKY True PC9_epitope_Rep2 1141.53049202281 1141.52884490379 29.282 3 -2.880549887582895 0.4626243656429031 1.0 ['NFASC|p.D677E|1|0.36|ENSG00000163531|chr1:204979414-204979414|C/A|missense_variant'] 79154 22869 PGATKRAL True PC9_epitope_Rep5 812.4868363056798 812.48628496793 92.964 1 -2.8809101753521102 0.4626243656429031 1.0 ['ENST00000330692.11_1_11:3384596-3392269:-|nuORF'] 105079 4747 STKTTMKP True PC9_epitope_Rep4 892.46880328304 892.46770993586 24.821 2 -2.8816732569795964 0.4626243656429031 1.0 ['MUC20|p.A632T|1|0.15|ENSG00000176945|chr3:195726497-195726497|G/A|missense_variant'] 47126 11650 IWCQLVEQWVM True PC9_epitope_Rep6 1433.68356415989 1433.6824699358601 55.937 2 -2.881823860107662 0.4626243656429031 1.0 ['ENST00000465713.5_1_2:219472784-219498591:+|nuORF', 'ENST00000483685.5_1_2:219472784-219496902:+|nuORF', 'ENST00000469493.5_1_2:219472784-219492999:+|nuORF'] 122617 14339 VGTLGTHT True NCI_RA007_Epitope_Rep3 784.4079172786402 784.4073649679301 63.718 1 -2.8822721820700363 0.4626243656429031 1.0 ['ENSG00000166250|ENST00000448775|CLMP'] 129723 22066 VTKARLTDK True PC9_epitope_Rep4 1030.61349337078 1030.6123899358602 93.094 2 -2.882813544372998 0.4626243656429031 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 39093 23699 HLAPGPVL True NCI_RA007_Epitope_Rep3 802.47012361238 802.46957496793 102.75 1 -2.8836371691688165 0.4626243656429031 1.0 ['ENST00000262144.10_1_16:74907771-74907879:-|nuORF'] 49174 22253 KGPARQAK True PC9_epitope_Rep6 854.5086343794198 854.50752993586 98.555 2 -2.8866919261040698 0.46262673151381517 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 34416 3205 GPWPLAAY True PC9_epitope_Rep1 873.4384891309298 873.43738993586 17.209 2 -2.888052493985884 0.46262673151381517 1.0 ['ENST00000512335.5_1_5:1633012-1634075:-|nuORF'] 64212 21084 LQIHQRIHT True PC9_epitope_Rep5 1144.6465248345598 1144.6454299358602 86.162 2 -2.888055794246691 0.46262673151381517 1.0 ['ENSG00000256294|ENST00000262894|ZNF225'] 84385 22344 QGAVTGKPR True PC9_epitope_Rep2 912.5141136826799 912.5130099358599 91.434 2 -2.888056306172824 0.46262673151381517 1.0 ['ENSG00000073050|ENST00000262887|XRCC1', 'XRCC1|p.D487Tfs*6|2|0.14|ENSG00000073050|chr19:43546074-43546074|C/-|frameshift_variant'] 134797 7927 WYMKRHIDYSR True NCI_RA007_Epitope_Rep2 1553.75615193653 1553.7550499358601 35.466 2 -2.888567290823086 0.46262673151381517 1.0 ['nc|ENSG00000081985|Q99665-2|IL12RB2', 'nc|ENSG00000081985|Q99665-3|IL12RB2', 'ENSG00000081985|ENST00000674203|IL12RB2'] 49173 21201 KGPARQAK True PC9_epitope_Rep6 854.5086343794198 854.50752993586 94.398 2 -2.8888128974150855 0.46262673151381517 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 28489 20365 FSFFPFLGR True PC9_epitope_Rep2 1116.5756513100798 1116.5745499358602 83.757 2 -2.891625675620901 0.4626275200708943 1.0 ['DNAJC22|p.L227F|1|0.43|ENSG00000178401|chr12:49349551-49349551|C/T|missense_variant'] 10537 24884 CPPPCSSV True H1975_Epitope_Rep2 788.3196965212001 788.31858993586 102.29 2 -2.892124323844743 0.4626275200708943 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 93220 22444 RRRRRRNYFA True PC9_epitope_Rep6 1449.8290144966898 1449.8279099358601 99.326 2 -2.892632064467438 0.4626306739664757 1.0 ['ENST00000473523.1_1_3:85008309-85008745:+|nuORF'] 52369 21859 KPGERKKT True PC9_epitope_Rep4 942.5610638750999 942.55996993586 92.286 2 -2.8942024918876257 0.4626306739664757 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 52371 22475 KPGERKKT True PC9_epitope_Rep5 942.5610638750999 942.55996993586 91.453 2 -2.8950261884151938 0.4626306739664757 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 32346 22182 GGCREVPQ True PC9_epitope_Rep6 844.3861362882399 844.38502993586 98.27 2 -2.8954007605836316 0.4626306739664757 1.0 ['ENSG00000229924|ENST00000512047|FAM90A26', 'nc|ENSG00000205879|Q658T7|FAM90A2P', 'nc|ENSG00000285950|A6NDY2|FAM90A10', 'nc|ENSG00000285937|A6NJQ4|FAM90A8', 'nc|ENSG00000285765|A8MXZ1|FAM90A23', 'nc|ENSG00000285720|P0DV74|FAM90A17', 'nc|ENSG00000285657|P0DV76|FAM90A19', 'nc|ENSG00000254229|A8MX19|FAM90A12', 'nc|ENSG00000233132|A0A8V8TPE2|FAM90A3', 'nc|ENSG00000205879|Q658T7-2|FAM90A2P', 'nc|ENSG00000230045|P0C7V4|FAM90A15', 'nc|ENSG00000223885|P0C7W8|FAM90A13', 'nc|ENSG00000215373|A8MXJ8|FAM90A5', 'nc|ENSG00000215354|P0C7X0|FAM90A24', 'ENSG00000171847|ENST00000538603|FAM90A1', 'nc|ENSG00000285975|A6NKC0|FAM90A7', 'nc|ENSG00000285975|A6NNJ1|FAM90A9', 'nc|ENSG00000233115|A0A8V8TNH8|FAM90A11'] 33179 25726 GKVKAPLL True NCI_RA007_Epitope_Rep1 824.5483739330799 824.54726993586 106.47 2 -2.895474399637896 0.4626306739664757 1.0 ['ENSG00000131944|ENST00000588258|FAAP24'] 70459 24533 LYRVFVGFLFP True H1975_Epitope_Rep1 1356.7594293284797 1356.75832993586 101.67 2 -2.895997581925611 0.4626306739664757 1.0 ['ENSG00000177464|ENST00000323040|GPR4'] 51883 22321 KKRFWIIE True PC9_epitope_Rep4 1118.6600496403796 1118.6589499358602 94.096 2 -2.8963885110375047 0.4626306739664757 1.0 ['ENSG00000130940|ENST00000377022|CASZ1'] 53363 22103 KTVSTKGKTT True NCI_RA007_Epitope_Rep5 1049.6080736371698 1049.6069699358602 92.149 2 -2.8968768675123906 0.4626306739664757 1.0 ['ENSG00000065618|ENST00000648076|COL17A1', 'nc|ENSG00000065618|Q9UMD9-2|COL17A1'] 68748 20232 LVDMAKKL True H1975_Epitope_Rep2 916.54157430048 916.54046993586 83.845 2 -2.900103383605999 0.4626361920030376 1.0 ['nc|ENSG00000102383|Q96MV8-3|ZDHHC15', 'ENSG00000102383|ENST00000373367|ZDHHC15', 'nc|ENSG00000102383|Q96MV8-2|ZDHHC15'] 69449 19194 LVRRLLPDSR True NCI_RA007_Epitope_Rep4 1223.7462388758297 1223.7445949037901 82.983 3 -2.9022310450698994 0.4626361920030376 1.0 ['ENST00000211314.4_1_6:52535944-52541959:+|nuORF'] 68919 24196 LVFKAKKRK True PC9_epitope_Rep1 1116.74953335112 1116.74842993586 97.885 2 -2.903152024982923 0.4626361920030376 1.0 ['ENST00000306376.9_1_3:185765504-185765672:-|nuORF'] 117809 7272 VAMSRMRQR True PC9_epitope_Rep1 1133.59100118773 1133.58934490379 32.784 3 -2.904123906001092 0.4626361920030376 1.0 ['ENSG00000187961|ENST00000338591|KLHL17'] 93877 24707 RVGPGDPVH True PC9_epitope_Rep3 932.4828135544001 932.48170993586 100.41 2 -2.9051316238487614 0.4626361920030376 1.0 ['ENST00000494374.5_1_7:32997059-33028356:+|nuORF', 'ENST00000469202.5_1_7:32997059-33014827:+|nuORF'] 93334 16935 RRSWRPRKQWL True NCI_RA007_Epitope_Rep2 1567.89603142735 1567.89492993586 70.611 2 -2.907334858057681 0.4626361920030376 1.0 ['ENST00000397497.8_2_8:27288464-27288860:+|nuORF'] 49160 16941 KGPARQAK True H1975_Epitope_Rep2 854.5086343794198 854.50752993586 70.408 2 -2.9076134547813424 0.4626361920030376 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 83349 16515 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 70.284 2 -2.909692490243183 0.4626361920030376 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 88810 24047 RDRPAAAK True PC9_epitope_Rep2 883.4987979717098 883.49770993586 97.999 2 -2.910451019847187 0.4626361920030376 1.0 ['ENSG00000189350|ENST00000379558|TOGARAM2', 'TOGARAM2|p.G616Rfs*15|1|0.23|ENSG00000189350|chr2:29024366-29024367|-/C|frameshift_variant'] 102390 6219 SPVSPVKHD True PC9_epitope_Rep2 964.4977949122001 964.49668993586 29.32 2 -2.910480563542858 0.4626361920030376 1.0 ['chr15:53523322-53540662|439|28.56|0.17|7.41|-|2|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|90', 'chr15:53523322-53684228|265|18.12|0.04|8.74|-|2|TE_info:L1PA3,L1PA3_dup9610,L1,LINE,donor,+,53684228,53690229|WDR72,None|79'] 83371 19840 QARADPVP True NCI_RA007_Epitope_Rep5 852.4453654165198 852.44426993586 83.225 2 -2.910973750189053 0.4626361920030376 1.0 ['ENSG00000186143|ENST00000335524|PRR30'] 39234 24859 HLKLGARFR True NCI_RA007_Epitope_Rep5 1096.6617809758798 1096.66068993586 103.11 2 -2.9110346206381625 0.4626361920030376 1.0 ['ENST00000389262.8_1_22:19048277-19109719:-|nuORF'] 52368 22497 KPGERKKT True PC9_epitope_Rep3 942.5610638750999 942.55996993586 91.81 2 -2.9113754845986026 0.4626361920030376 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 114307 10717 TSALSKKP True PC9_epitope_Rep5 830.48616759934 830.48506993586 46.213 2 -2.911651969929438 0.4626361920030376 1.0 ['nc|ENSG00000135314|Q4VXA5|KHDC1', 'ENSG00000135314|ENST00000257765|KHDC1'] 129078 19379 VTARDPAR True PC9_epitope_Rep6 884.4828135543999 884.48170993586 87.193 2 -2.9148927639089233 0.46264752723782604 1.0 ['ENST00000342963.2_1_7:5459527-5460374:+|nuORF'] 52363 23348 KPGERKKT True PC9_epitope_Rep1 942.5610638750999 942.55996993586 94.6 2 -2.915533549634851 0.46264752723782604 1.0 ['ENST00000341617.7_1_7:126079175-126341814:-|nuORF', 'GRM8|p.I596Mfs*6|1|0.25|ENSG00000179603|chr7:126533594-126533594|G/-|frameshift_variant', 'nc|ENSG00000179603|O00222-2|GRM8', 'ENSG00000179603|ENST00000339582|GRM8'] 140358 18736 YYEKDPKR True PC9_epitope_Rep4 1097.5505587610498 1097.54997496793 80.151 1 -2.9176842280164523 0.4626742886071677 1.0 ['ENSG00000068976|ENST00000164139|PYGM'] 3616 8363 AGPPPPCF True NCI_RA007_Epitope_Rep3 784.35779628208 784.35724496793 39.999 1 -2.9194561895781637 0.4626750759365508 1.0 ['SARAF|p.G227C|1|0.52|ENSG00000133872|chr8:30069663-30069663|C/A|missense_variant'] 98604 17486 SINQLTAA True NCI_RA007_Epitope_Rep4 816.4341320264799 816.43302993586 75.705 2 -2.9201324573999314 0.4626750759365508 1.0 ['ENSG00000011405|ENST00000691414|PIK3C2A'] 112933 25229 TPRASVGN True PC9_epitope_Rep3 800.41406528824 800.41296993586 102.42 2 -2.9221683055093415 0.46268467841437566 1.0 ['nc|ENSG00000188827|Q8IY92-2|SLX4', 'ENSG00000188827|ENST00000294008|SLX4'] 62334 26516 LLRGPHKPR True PC9_epitope_Rep3 1072.6617809758798 1072.66068993586 108.43 2 -2.924290783008214 0.46268467841437566 1.0 ['ENSG00000118156|ENST00000391901|ZNF541'] 39618 24801 HPLPGMTH True H1975_Epitope_Rep3 888.4276071774002 888.4265099358599 103.16 2 -2.924542459699053 0.46268467841437566 1.0 ['ENST00000571657.5_1_17:19281216-19286541:+|nuORF'] 18966 15048 ELFLHMPLCRE True NCI_RA007_Epitope_Rep1 1386.67881313262 1386.67770993586 62.599 2 -2.928113517070104 0.46268467841437566 1.0 ['ENST00000592831.1_1_17:40672405-40672870:+|nuORF'] 83370 20291 QARADPVP True NCI_RA007_Epitope_Rep1 852.4453654165198 852.44426993586 83.135 2 -2.928264344499331 0.46268467841437566 1.0 ['ENSG00000186143|ENST00000335524|PRR30'] 60891 25213 LKRKQRRYRTT True PC9_epitope_Rep2 1504.9062617578797 1504.9051699358602 102.65 2 -2.9298711598265856 0.46268467841437566 1.0 ['ENSG00000004848|ENST00000379044|ARX'] 136954 25457 YKHGALVRKVH True PC9_epitope_Rep2 1306.76222329314 1306.76112993586 103.6 2 -2.93023410873829 0.46268467841437566 1.0 ['ENST00000479172.5_1_10:104164653-104165190:-|nuORF', 'nc|ENSG00000059915|A5PKW4-2|PSD', 'PSD|p.G779Afs*15|1|0.14|ENSG00000059915|chr10:102405244-102405244|C/-|frameshift_variant', 'ENSG00000059915|ENST00000020673|PSD'] 13821 21717 DQVQAKRP True PC9_epitope_Rep6 940.5090283022399 940.50792993586 96.42 2 -2.9303951838929643 0.46268467841437566 1.0 ['ENST00000335661.6_1_15:80263304-80263385:-|nuORF'] 3737 23834 AGSVPHKK True NCI_RA007_Epitope_Rep3 822.47118624154 822.47008993586 103.27 2 -2.9305538743897395 0.46268467841437566 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 5489 24025 AMLLECRW True NCI_RA007_Epitope_Rep5 1020.4884931818 1020.48738993586 99.806 2 -2.9309514591573937 0.46268467841437566 1.0 ['nc|ENSG00000071054|O95819|MAP4K4', 'nc|ENSG00000071054|O95819-3|MAP4K4', 'ENSG00000071054|ENST00000324219|MAP4K4'] 87997 15821 QVRVLHHRHHR True PC9_epitope_Rep5 1473.82901449669 1473.8279099358601 65.847 2 -2.9319327700173097 0.46268467841437566 1.0 ['ENST00000314222.4_1_11:2949785-2950526:-|nuORF'] 16080 14833 EEDGLVAWF True NCI_RA007_Epitope_Rep1 1064.48147614172 1064.4803699358602 61.757 2 -2.933207588793378 0.4626854654166974 1.0 ['ENSG00000112874|ENST00000230792|NUDT12', 'nc|ENSG00000112874|Q9BQG2-2|NUDT12'] 137721 12159 YMYILPYKEFF True NCI_RA007_Epitope_Rep3 1512.7363109253995 1512.7352099358602 54.947 2 -2.9335280771889343 0.4626854654166974 1.0 ['ENSG00000118276|ENST00000306851|B4GALT6', 'nc|ENSG00000118276|Q9UBX8-2|B4GALT6', 'ENST00000578114.1_1_18:29206329-29238028:-|nuORF'] 45137 23821 IQYHKERWLAK True PC9_epitope_Rep1 1470.80956740838 1470.80791490379 96.426 3 -2.9360720409434844 0.46270482296126025 1.0 ['ENSG00000162738|ENST00000368061|VANGL2'] 134790 25185 WYKNGRMITE True PC9_epitope_Rep3 1296.6284918119197 1296.62738993586 102.24 2 -2.93876858665603 0.46270482296126025 1.0 ['nc|ENSG00000143341|Q96RW7-2|HMCN1', 'ENSG00000143341|ENST00000271588|HMCN1', 'HMCN1|p.R5413Lfs*18|1|0.17|ENSG00000143341|chr1:186178707-186178710|GAAG/-|frameshift_variant', 'HMCN1|p.W4766Tfs*87|1|0.12|ENSG00000143341|chr1:186145432-186145456|TGGGGAACATGCAGCCGGACGTGTA/-|frameshift_variant', 'HMCN1-IGLL5|1|fusion'] 48210 23954 KCCNHCYL True NCI_RA007_Epitope_Rep5 982.3823138610999 982.3812099358599 99.514 2 -2.939697181156332 0.46270482296126025 1.0 ['ENSG00000173575|ENST00000394196|CHD2', 'nc|ENSG00000173575|O14647-2|CHD2', 'nc|ENSG00000153922|O14646-2|CHD1', 'ENSG00000153922|ENST00000614616|CHD1'] 136075 16010 YFYPTYDEN True NCI_RA007_Epitope_Rep3 1210.4818700645399 1210.48076993586 70.652 2 -2.940088065302389 0.46270482296126025 1.0 ['nc|ENSG00000101977|P10911|MCF2', 'nc|ENSG00000101977|P10911-4|MCF2', 'nc|ENSG00000101977|P10911-3|MCF2', 'ENSG00000101977|ENST00000519895|MCF2'] 30784 23103 GAPGTALRRSR True PC9_epitope_Rep1 1140.6475874637201 1140.64707496793 93.667 1 -2.940152448882839 0.46270482296126025 1.0 ['ENST00000401533.6_1_2:26411135-26411324:+|nuORF'] 63051 24564 LNKPCALF True NCI_RA007_Epitope_Rep5 904.48405942436 904.48296993586 101.96 2 -2.940877473653655 0.46270482296126025 1.0 ['PHF11|p.K307Nfs*55|1|0.37|ENSG00000136147|chr13:49528587-49528587|A/-|frameshift_variant'] 63052 24774 LNKPCALF True PC9_epitope_Rep3 904.48405942436 904.48296993586 100.67 2 -2.9412109796663186 0.46270482296126025 1.0 ['PHF11|p.K307Nfs*55|1|0.37|ENSG00000136147|chr13:49528587-49528587|A/-|frameshift_variant'] 24295 23326 FAARTVVK True NCI_RA007_Epitope_Rep3 890.5337864980999 890.53268993586 101.3 2 -2.942086186557941 0.46270482296126025 1.0 ['nc|ENSG00000095321|P43155-3|CRAT', 'ENSG00000095321|ENST00000318080|CRAT'] 83372 23901 QARADPVP True PC9_epitope_Rep1 852.4453654165198 852.44426993586 96.737 2 -2.942531779217687 0.46270482296126025 1.0 ['ENSG00000186143|ENST00000335524|PRR30'] 40887 22660 HVPNGGRV True PC9_epitope_Rep2 834.4460341228599 834.44492993586 92.658 2 -2.944905492145483 0.46272103248663526 1.0 ['nc|ENSG00000118094|O43280-2|TREH', 'ENSG00000118094|ENST00000264029|TREH'] 98049 22176 SHTSEGAH True H1975_Epitope_Rep1 824.3412942708001 824.3401899358599 92.27 2 -2.9473084507418976 0.46274290654885547 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 97214 20400 SFKRRWRR True NCI_RA007_Epitope_Rep4 1190.6897270592199 1190.68807490379 88.33 3 -2.9497115847233086 0.46274290654885547 1.0 ['ENST00000285814.8_1_2:122494326-122494371:-|nuORF'] 98692 24777 SIQRVLADLKV True NCI_RA007_Epitope_Rep5 1240.7503211967598 1240.74922993586 102.79 2 -2.9518777593237933 0.46275423594782955 1.0 ['ENSG00000101132|ENST00000371419|PFDN4', 'ENST00000487129.1_1_20:52825073-52835686:+|nuORF'] 63050 18477 LNKPCALF True NCI_RA007_Epitope_Rep5 904.48405942436 904.48296993586 77.898 2 -2.9521769881972912 0.46275423594782955 1.0 ['PHF11|p.K307Nfs*55|1|0.37|ENSG00000136147|chr13:49528587-49528587|A/-|frameshift_variant'] 136074 3831 YFYNYPAVC True PC9_epitope_Rep5 1138.4793679667398 1138.47826993586 19.82 2 -2.954379203780545 0.46279153135675427 1.0 ['ENST00000495897.2_1_10:75227245-75231333:-|nuORF', 'nc|ENSG00000107758|P16298-2|PPP3CB', 'nc|ENSG00000107758|P16298-3|PPP3CB', 'ENSG00000107758|ENST00000360663|PPP3CB', 'nc|ENSG00000107758|P16298-4|PPP3CB'] 121644 23710 VGLGHPPT True NCI_RA007_Epitope_Rep2 776.4180880395201 776.41753496793 99.495 1 -2.956714568771609 0.462797195424113 1.0 ['ENST00000325327.3_1_19:2429436-2429694:-|nuORF'] 57159 16434 LEERRHTEAI True PC9_epitope_Rep3 1252.65239806064 1252.6513099358601 68.352 2 -2.9573815708432027 0.4628028593720347 1.0 ['ENSG00000205126|ENST00000378832|ACCSL'] 114097 22200 TRRPPATA True PC9_epitope_Rep1 868.4878989348399 868.48680993586 90.212 2 -2.9581447114998927 0.46280364372469635 1.0 ['CLEC14A|p.K422Nfs*43|1|0.35|ENSG00000176435|chr14:38254757-38254757|C/-|frameshift_variant', 'ENSG00000176435|ENST00000342213|CLEC14A'] 110062 27226 THYLVFWER True PC9_epitope_Rep5 1249.6243924076498 1249.6227449037901 111.52 3 -2.9588159757173305 0.46280364372469635 1.0 ['nc|ENSG00000171105|P06213-2|INSR', 'ENSG00000171105|ENST00000302850|INSR'] 35616 6153 GTLFFCILSM True NCI_RA007_Epitope_Rep5 1130.5504247320198 1130.5493299358602 30.347 2 -2.9627187486179096 0.462831177320218 1.0 ['TSPAN16|p.L88F|1|0.14|ENSG00000130167|chr19:11298336-11298336|G/C|missense_variant'] 99871 13045 SLHHHISV True PC9_epitope_Rep2 928.48789893484 928.48680993586 55.457 2 -2.963225767914813 0.462831177320218 1.0 ['ENSG00000123066|ENST00000281928|MED13L'] 95460 5554 SALQNTNNAN True PC9_epitope_Rep5 1045.47885037277 1045.4777499358602 26.37 2 -2.9634725029854585 0.462831177320218 1.0 ['ENSG00000105849|ENST00000222567|POLR1F'] 37054 9331 GVSERDLK True PC9_epitope_Rep3 902.4821448480599 902.48104993586 40.831 2 -2.964948472401854 0.46285792603213427 1.0 ['ENSG00000145423|ENST00000274063|SFRP2'] 85919 18379 QNSLLALA True NCI_RA007_Epitope_Rep3 828.4705175352 828.46942993586 80.481 2 -2.9684481298524066 0.46286358892180535 1.0 ['nc|ENSG00000126903|P09131-2|SLC10A3', 'ENSG00000126903|ENST00000651600|SLC10A3'] 63053 25168 LNKPCALF True PC9_epitope_Rep3 904.48405942436 904.48296993586 102.17 2 -2.9693932194572272 0.462864371936113 1.0 ['PHF11|p.K307Nfs*55|1|0.37|ENSG00000136147|chr13:49528587-49528587|A/-|frameshift_variant'] 100715 23522 SLRGRGLA True PC9_epitope_Rep2 828.4929843152798 828.49188993586 95.95 2 -2.9699710789023985 0.462864371936113 1.0 ['ENST00000433465.1_1_21:46713271-46716280:+|nuORF'] 49169 22399 KGPARQAK True PC9_epitope_Rep4 854.5086343794198 854.50752993586 94.391 2 -2.972589196380595 0.4628805768744202 1.0 ['nc|ENSG00000124839|Q9H0T7-2|RAB17', 'ENST00000466244.1_1_2:238483664-238484282:-|nuORF', 'ENSG00000124839|ENST00000264601|RAB17'] 84411 4202 QGFLVMLA True PC9_epitope_Rep3 877.4731603874899 877.47206993586 21.279 2 -2.9747954920523316 0.46288623928650496 1.0 ['ABCC3|p.V1501Sfs*3|1|0.15|ENSG00000108846|chr17:50691115-50691116|-/A|frameshift_variant', 'ENSG00000108846|ENST00000285238|ABCC3', 'nc|ENSG00000108846|O15438-4|ABCC3', 'nc|ENSG00000108846|O15438-2|ABCC3', 'ENST00000502426.5_1_17:48736553-48755440:+|nuORF'] 68361 18289 LTSLRKLWLMH True NCI_RA007_Epitope_Rep4 1396.8013112238 1396.80020993586 79.104 2 -2.9772392939331294 0.4629024436526176 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B', 'LRRC4B|p.G469Afs*22|1|0.4|ENSG00000131409|chr19:50518307-50518307|C/-|frameshift_variant'] 98051 24548 SHTSEGAH True PC9_epitope_Rep1 824.3412942708001 824.3401899358599 99.283 2 -2.977404491495462 0.46290810571479774 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 53609 21170 KVWCHGAS True PC9_epitope_Rep4 886.41195711326 886.41084993586 89.593 2 -2.9788314501002793 0.46291376765760067 1.0 ['ENST00000487854.1_1_8:139626161-139632292:-|nuORF'] 19758 8043 ELSTPGGK True PC9_epitope_Rep3 787.4075829254699 787.40648993586 35.912 2 -2.9797736498967358 0.4629250911850899 1.0 ['nc|ENSG00000170854|Q8IUF8-4|RIOX2', 'ENSG00000170854|ENST00000394198|RIOX2', 'nc|ENSG00000170854|Q8IUF8-3|RIOX2'] 67535 7296 LTEMWYWIFLW True NCI_RA007_Epitope_Rep3 1586.76319437958 1586.76208993586 35.808 2 -2.9810171103590735 0.4629250911850899 1.0 ['ENSG00000205269|ENST00000379426|TMEM170B'] 52901 23245 KRGMLATP True NCI_RA007_Epitope_Rep5 872.4902074339599 872.48910993586 96.682 2 -2.9831275736132734 0.462962377323087 1.0 ['ENST00000262494.12_3_16:56379319-56379799:+|nuORF'] 125205 25557 VLQLKHPLNTT True PC9_epitope_Rep5 1262.7346711326197 1262.73356993586 103.6 2 -2.984401050954886 0.46296803845505147 1.0 ['ENST00000511359.1_1_5:23303923-23304922:-|nuORF'] 129783 22410 VTKRTRSL True PC9_epitope_Rep3 959.5876129761099 959.58650993586 91.478 2 -2.9862714745567738 0.4629736994676646 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 138446 8068 YREWRRYYEVW True H1975_Epitope_Rep1 1704.8161093408 1704.8150099358602 35.977 2 -2.987065373036698 0.4629752606225427 1.0 ['ENSG00000118017|ENST00000236709|A4GNT'] 15830 7802 EDKLRQRFR True PC9_epitope_Rep4 1246.6894522757 1246.68781490379 37.411 3 -2.9879518820120827 0.4629752606225427 1.0 ['ENSG00000198887|ENST00000361138|SMC5'] 134020 3845 WPWEFWENFYF True NCI_RA007_Epitope_Rep2 1649.6979512707296 1649.6968499358602 19.59 2 -2.9882925271197696 0.4629752606225427 1.0 ['ENST00000493196.1_1_21:30378203-30378365:-|nuORF'] 46808 21038 IVDPLLIVI True NCI_RA007_Epitope_Rep4 993.6474192680099 993.64632993586 91.198 2 -2.991141208727256 0.4629752606225427 1.0 ['ENSG00000167360|ENST00000300778|OR51Q1'] 55087 17805 LALLVVLSPP True H1975_Epitope_Rep2 1020.6583183048799 1020.6577749679301 73.807 1 -2.9931325816078522 0.4630020027405924 1.0 ['ENSG00000204301|ENST00000375023|NOTCH4'] 8912 15053 AVGHMLAP True H1975_Epitope_Rep3 794.4108944840999 794.4103449679301 63.295 1 -2.995874810283217 0.46300844286572573 1.0 ['NALCN|p.W571L|1|0.25|ENSG00000102452|chr13:101191969-101191969|C/A|missense_variant'] 137596 2018 YLTEQLVAIY True NCI_RA007_Epitope_Rep1 1211.6437904395498 1211.64268993586 10.6 2 -2.996363440786045 0.46300844286572573 1.0 ['ENST00000542112.5_1_11:62621512-62623345:-|nuORF'] 133850 25000 WLYKFAKIL True PC9_epitope_Rep3 1180.7008518231999 1180.6997499358602 101.51 2 -3.0040620155948243 0.46300844286572573 1.0 ['L1ME1_dup14741|chr8:25510836-25512219:-|1.1935286187833651|0.2188578600898351|2.45|501.0|44|2|sense'] 103938 23547 SRPPGGGG True PC9_epitope_Rep4 683.3350866915499 683.33453496793 98.879 1 -3.005894104745036 0.4630100024241913 1.0 ['ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 61502 18321 LLFRWKPLWGV True NCI_RA007_Epitope_Rep4 1413.8285119478098 1413.82740993586 79.269 2 -3.0060253561592423 0.4630100024241913 1.0 ['nc|ENSG00000159363|Q9NQ11-3|ATP13A2', 'ENSG00000159363|ENST00000326735|ATP13A2', 'ATP13A2|p.P619Rfs*19|1|0.12|ENSG00000159363|chr1:16992392-16992392|G/-|frameshift_variant', 'nc|ENSG00000159363|Q9NQ11-2|ATP13A2'] 123242 26881 VHMPEGLF True PC9_epitope_Rep5 928.4476739156399 928.44656993586 109.81 2 -3.0069671683605064 0.4630100024241913 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 109367 20390 TGISVRKR True PC9_epitope_Rep6 915.5613982282699 915.56030993586 91.128 2 -3.00873052715099 0.4630100024241913 1.0 ['ENSG00000164190|ENST00000282516|NIPBL', 'nc|ENSG00000164190|Q6KC79-2|NIPBL'] 3741 25924 AGSVPHKK True PC9_epitope_Rep5 822.47118624154 822.47008993586 105.2 2 -3.0112718827665295 0.4630156622188495 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 49298 20353 KHNPLQCN True PC9_epitope_Rep6 952.4548845544001 952.45378993586 90.986 2 -3.0114341942116516 0.4630213218942021 1.0 ['ENST00000374092.8_1_20:34256969-34257164:-|nuORF'] 97973 26606 SHRQDYLV True NCI_RA007_Epitope_Rep5 1016.5039429217999 1016.50284993586 110.0 2 -3.012837144954321 0.4630228808111042 1.0 ['ENSG00000182793|ENST00000370989|GSTA5'] 98052 24321 SHTSEGAH True PC9_epitope_Rep2 824.3412942708001 824.3401899358599 99.092 2 -3.013545211152797 0.4630228808111042 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 33136 23679 GKPNKRRGF True PC9_epitope_Rep5 1058.6097454030198 1058.60864993586 96.06 2 -3.013946623335076 0.4630228808111042 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 49181 22632 KGPKKVEKY True PC9_epitope_Rep6 1075.6389798426299 1075.6378899358601 100.1 2 -3.0144797581247893 0.4630228808111042 1.0 ['ENST00000487211.5_1_20:55043753-55046687:+|nuORF'] 49505 22229 KKDVDCAY True NCI_RA007_Epitope_Rep5 940.4324177743199 940.43132993586 92.652 2 -3.017158466189744 0.46303321530939134 1.0 ['ENSG00000135443|ENST00000257901|KRT85', 'CON__P78386', 'CON__Q61726', 'nc|ENSG00000290966|A6NCN2|KRT87P', 'ENSG00000170442|ENST00000423955|KRT86', 'CON__O43790', 'ENSG00000170523|ENST00000293670|KRT83', 'CON__Q6NT21', 'CON__P78385', 'ENSG00000205426|ENST00000327741|KRT81', 'CON__Q14533'] 3738 23926 AGSVPHKK True NCI_RA007_Epitope_Rep4 822.47118624154 822.47008993586 103.76 2 -3.019416003294165 0.46303321530939134 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 118879 17991 VEENQKYFK True PC9_epitope_Rep5 1183.5873381925896 1183.58624993586 74.219 2 -3.0250152286173653 0.46303321530939134 1.0 ['ENSG00000136731|ENST00000259253|UGGT1', 'nc|ENSG00000136731|Q9NYU2-2|UGGT1', 'ENST00000438277.5_1_2:128855105-128928859:+|nuORF'] 48306 22578 KDNPAFAF True H1975_Epitope_Rep1 908.43921740692 908.43812993586 93.905 2 -3.025883072397551 0.46303321530939134 1.0 ['ENST00000588731.6_1_19:19387459-19414804:-|nuORF', 'ENSG00000105705|ENST00000247001|SUGP1', 'SUGP1|p.K542Rfs*3|1|0.33|ENSG00000105705|chr19:19278700-19278700|T/-|frameshift_variant'] 83430 16883 QCSDCRPRVT True PC9_epitope_Rep1 1163.51756146395 1163.5164699358602 69.764 2 -3.026279622406669 0.46303321530939134 1.0 ['ENST00000357115.7_2_4:151935804-151936634:-|nuORF'] 32573 10261 GHAAAGGL True NCI_RA007_Epitope_Rep4 652.3292730351201 652.32872496793 46.324 1 -3.0272135401124087 0.46303321530939134 1.0 ['ENST00000375150.6_1_6:32116492-32119883:-|nuORF', 'ENST00000495191.5_1_6:32116492-32118763:-|nuORF', 'ENST00000211413.9_1_6:32116492-32119704:-|nuORF'] 98050 22065 SHTSEGAH True H1975_Epitope_Rep3 824.3412942708001 824.3401899358599 92.271 2 -3.027636691117583 0.46303321530939134 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 83348 16424 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 69.929 2 -3.0277192785602662 0.46303321530939134 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 83346 15617 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 66.779 2 -3.030931381993238 0.46303321530939134 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 56513 16529 LDTSGKNL True NCI_RA007_Epitope_Rep5 846.44469671018 846.44414496793 70.34 1 -3.031587675384757 0.46303321530939134 1.0 ['nc|ENSG00000048828|Q9NZB2-4|FAM120A', 'ENSG00000048828|ENST00000277165|FAM120A', 'nc|ENSG00000048828|Q9NZB2-6|FAM120A', 'nc|ENSG00000048828|Q9NZB2-5|FAM120A', 'nc|ENSG00000048828|Q9NZB2-2|FAM120A', 'nc|ENSG00000204352|Q5T035|FAM120A2P'] 89039 5415 REEEYEEYEEY True H1975_Epitope_Rep1 1566.59981292074 1566.5987099358601 25.887 2 -3.0325825998389497 0.46303321530939134 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 91280 15859 RLWWYHWICWL True H1975_Epitope_Rep3 1660.81254461384 1660.81144993586 66.451 2 -3.0331427917964033 0.46303321530939134 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 62177 24778 LLPKKPTA True PC9_epitope_Rep4 866.5589386167799 866.5583949679301 103.81 1 -3.0334096804246626 0.46303321530939134 1.0 ['ENSG00000047849|ENST00000683076|MAP4', 'MAP4|p.A982Qfs*13|1|0.37|ENSG00000047849|chr3:47869243-47869243|C/-|frameshift_variant', 'nc|ENSG00000047849|P27816-2|MAP4', 'nc|ENSG00000047849|P27816-4|MAP4', 'nc|ENSG00000047849|P27816-5|MAP4', 'nc|ENSG00000047849|P27816-6|MAP4', 'nc|ENSG00000047849|P27816|MAP4'] 52035 22725 KLGKAACY True PC9_epitope_Rep6 852.4527592960799 852.45166993586 100.49 2 -3.0366056620693285 0.4630599492080888 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336438-220336879:+|nuORF'] 83350 17734 QAPREMSS True NCI_RA007_Epitope_Rep5 904.40726565564 904.40616993586 74.994 2 -3.0376714920495216 0.4630607277210508 1.0 ['ENST00000540753.5_1_9:125133477-125134045:+|nuORF'] 53545 23382 KVPKACLF True PC9_epitope_Rep4 904.5204449330798 904.51934993586 98.196 2 -3.040285099084464 0.4630607277210508 1.0 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2'] 110844 18164 TKTRLQIQ True NCI_RA007_Epitope_Rep1 986.58727862294 986.58618993586 74.799 2 -3.0429165457100202 0.4630615062011991 1.0 ['ENSG00000174032|ENST00000519676|SLC25A30'] 44024 25418 ILKSTRLRLAH True PC9_epitope_Rep1 1306.81973816926 1306.81864993586 102.74 2 -3.0430207457140748 0.4630615062011991 1.0 ['nc|ENSG00000152409|Q8N9B5-2|JMY', 'ENSG00000152409|ENST00000396137|JMY'] 123236 26421 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 107.19 2 -3.045860094926226 0.46306716402183307 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 91871 24569 RPNPVSPY True NCI_RA007_Epitope_Rep5 928.4766655448 928.47556993586 101.98 2 -3.046620835837757 0.4630679423417348 1.0 ['ENSG00000168769|ENST00000380013|TET2'] 49542 19013 KKGHCLSE True NCI_RA007_Epitope_Rep5 900.4487365448 900.44762993586 79.991 2 -3.046771868501957 0.4630679423417348 1.0 ['ENST00000438609.5_1_2:172180771-172195744:-|nuORF', 'ENST00000463392.5_1_2:172180771-172183527:-|nuORF', 'ENSG00000123600|ENST00000375258|METTL8', 'ENST00000464491.5_1_2:172180771-172182690:-|nuORF'] 90703 4711 RKMTLDRSEY True NCI_RA007_Epitope_Rep4 1297.6448701520499 1297.64323490379 24.55 3 -3.054309810889759 0.4630841367683473 1.0 ['nc|ENSG00000130164|P01130-2|LDLR', 'nc|ENSG00000130164|P01130-3|LDLR', 'nc|ENSG00000130164|P01130-5|LDLR', 'ENSG00000130164|ENST00000558518|LDLR', 'nc|ENSG00000130164|P01130-6|LDLR', 'nc|ENSG00000130164|P01130-4|LDLR', 'ENST00000560173.1_1_19:11221401-11224126:+|nuORF'] 68360 19010 LTSLRKLWLMH True NCI_RA007_Epitope_Rep2 1396.8013112238 1396.80020993586 78.798 2 -3.055909036703703 0.4630897941120688 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B', 'LRRC4B|p.G469Afs*22|1|0.4|ENSG00000131409|chr19:50518307-50518307|C/-|frameshift_variant'] 98053 24873 SHTSEGAH True PC9_epitope_Rep5 824.3412942708001 824.3401899358599 100.83 2 -3.0601936512793175 0.46310598796716784 1.0 ['nc|ENSG00000104419|Q92597-3|NDRG1', 'nc|ENSG00000104419|Q92597-2|NDRG1', 'ENSG00000104419|ENST00000323851|NDRG1', 'ENST00000519278.5_1_8:134251123-134266883:-|nuORF'] 140357 18725 YYEKDPKR True PC9_epitope_Rep4 1097.5505587610498 1097.54946993586 80.107 2 -3.0607956704932184 0.4631067654279362 1.0 ['ENSG00000068976|ENST00000164139|PYGM'] 55563 4022 LCFRPRRKR True PC9_epitope_Rep1 1230.7243983157798 1230.72330993586 20.374 2 -3.0608205231660266 0.4631067654279362 1.0 ['ENST00000424605.5_1_9:2535977-2539406:-|nuORF'] 128809 23150 VSRRAAQL True PC9_epitope_Rep2 899.5300980999898 899.52900993586 94.531 2 -3.0612837473340018 0.46310754285593875 1.0 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 130248 22546 VTSRRKGL True PC9_epitope_Rep5 915.5613982282699 915.56030993586 91.728 2 -3.0613392110873447 0.46310754285593875 1.0 ['LTR2752_dup21|chr2:81481148-81482372:-|1.992639235350852|0.0780133736102343|4.67|458.0|40|1|anti-sense'] 33279 17612 GLARRSAV True PC9_epitope_Rep5 828.49298431528 828.49188993586 72.753 2 -3.0622029440409535 0.4631131995954147 1.0 ['ENST00000202834.11_1_20:5090032-5093697:-|nuORF'] 10538 24684 CPPPCSSV True NCI_RA007_Epitope_Rep1 788.3196965212001 788.31858993586 102.22 2 -3.0653858976991986 0.46313305806016686 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 68588 10676 LTYKRRAI True PC9_epitope_Rep5 1019.6239984848298 1019.62290993586 46.054 2 -3.0663894623001102 0.46313305806016686 1.0 ['ENST00000527167.5_1_22:42952032-42967202:+|nuORF', 'nc|ENSG00000293485|Q9NQF3|SERHL', 'ENST00000359906.6_1_22:42896676-42905109:+|nuORF', 'nc|ENSG00000183569|Q9H4I8-2|SERHL2', 'ENST00000534080.5_1_22:42950026-42967210:+|nuORF', 'ENSG00000183569|ENST00000327678|SERHL2'] 3740 25394 AGSVPHKK True PC9_epitope_Rep2 822.47118624154 822.47008993586 103.36 2 -3.0716767395672058 0.46313305806016686 1.0 ['ENSG00000124920|ENST00000278836|MYRF', 'nc|ENSG00000124920|Q9Y2G1-2|MYRF', 'ENST00000537318.5_1_11:61546644-61549415:+|nuORF'] 78086 26195 PALVLPVH True NCI_RA007_Epitope_Rep5 844.5170738048 844.5165249679301 108.34 1 -3.0725677928756023 0.46313305806016686 1.0 ['ENST00000498057.1_1_3:48679620-48680257:-|nuORF'] 71272 19050 MGRVTEGKEP True PC9_epitope_Rep5 1102.54409348162 1102.54298993586 78.304 2 -3.0726948098561278 0.46313305806016686 1.0 ['ENST00000434813.3_1_2:201724904-201726163:-|nuORF'] 41501 22786 ICYMHNKI True NCI_RA007_Epitope_Rep5 1020.4884931818 1020.48738993586 94.854 2 -3.0767993131478493 0.46313305806016686 1.0 ['ACOT9-APOO|2|fusion', 'ENSG00000123130|ENST00000379303|ACOT9', 'nc|ENSG00000123130|Q9Y305-3|ACOT9', 'ACOT9-APOO|1|fusion', 'nc|ENSG00000123130|Q9Y305-2|ACOT9', 'nc|ENSG00000123130|Q9Y305|ACOT9'] 10539 22612 CPPPCSSV True NCI_RA007_Epitope_Rep3 788.3196965212001 788.31858993586 98.298 2 -3.0795946998433985 0.46313305806016686 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 58006 11652 LERCRQQA True PC9_epitope_Rep1 1002.5028973759798 1002.50180993586 49.698 2 -3.079914384853367 0.46313305806016686 1.0 ['ENSG00000156194|ENST00000286719|PPEF2', 'nc|ENSG00000156194|O14830-2|PPEF2'] 69804 23358 LWSAFLCLI True NCI_RA007_Epitope_Rep3 1064.5728744287599 1064.5717699358602 101.43 2 -3.080024546813971 0.46313305806016686 1.0 ['nc|ENSG00000080493|Q9Y6R1-2|SLC4A4', 'SLC4A4|p.K1022Rfs*37|1|0.14|ENSG00000080493|chr4:71560215-71560215|G/-|frameshift_variant', 'ENSG00000080493|ENST00000264485|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-5|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-4|SLC4A4', 'nc|ENSG00000080493|Q9Y6R1-3|SLC4A4'] 38486 24594 HHAYQHPQ True H1975_Epitope_Rep3 1016.45766143572 1016.45656993586 102.34 2 -3.0816271794455687 0.46313305806016686 1.0 ['ENST00000341853.5_1_15:100332473-100332959:-|nuORF'] 100606 8013 SLQKAEKV True PC9_epitope_Rep4 901.5232813840498 901.52218993586 38.273 2 -3.0846306220831567 0.46313305806016686 1.0 ['ENSG00000204815|ENST00000377540|ODAD4'] 39597 19142 HPLKRGPSP True PC9_epitope_Rep1 987.5613982282699 987.56030993586 78.423 2 -3.0860329187505755 0.46313305806016686 1.0 ['ENST00000369800.5_1_5:172116953-172117430:+|nuORF'] 39596 20545 HPLFLWLKWK True NCI_RA007_Epitope_Rep3 1366.7913981630998 1366.78975490379 89.494 3 -3.0862829230135578 0.46313305806016686 1.0 ['ENSG00000121314|ENST00000240615|TAS2R8'] 53237 25372 KTELQQIGKKI True PC9_epitope_Rep5 1284.7765359445996 1284.7759749679299 102.81 1 -3.088084619880155 0.46313305806016686 1.0 ['ENSG00000134744|ENST00000257177|TUT4', 'nc|ENSG00000134744|Q5TAX3|TUT4', 'nc|ENSG00000134744|Q5TAX3-2|TUT4'] 73946 24351 NHLKKLVPRH True PC9_epitope_Rep4 1240.7516586094398 1240.75056993586 102.15 2 -3.088739740951528 0.46313305806016686 1.0 ['nc|ENSG00000003400|Q92851-6|CASP10', 'nc|ENSG00000003400|Q92851-2|CASP10', 'ENSG00000003400|ENST00000286186|CASP10'] 30509 6069 GAHGPPGPT True PC9_epitope_Rep3 789.37695150353 789.37584993586 28.394 2 -3.092454012048889 0.46313305806016686 1.0 ['ENSG00000171812|ENST00000397799|COL8A2'] 92302 24605 RQLLAHFH True H1975_Epitope_Rep1 1020.5617325814399 1020.56062993586 101.95 2 -3.0941472781922803 0.46313305806016686 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 127181 24799 VQFKEELL True H1975_Epitope_Rep2 1004.5542471591598 1004.55314993586 101.95 2 -3.094568591816977 0.46313305806016686 1.0 ['ENSG00000160218|ENST00000291574|TRAPPC10', 'nc|ENSG00000160218|P48553-2|TRAPPC10'] 80937 22261 PMPMKRGP True H1975_Epitope_Rep3 912.4673638144 912.4662699358599 93.092 2 -3.096044138294292 0.46313305806016686 1.0 ['RBMXL2|p.G376Efs*4|1|0.33|ENSG00000170748|chr11:7090246-7090246|G/-|frameshift_variant', 'ENSG00000170748|ENST00000306904|RBMXL2'] 103991 23682 SRRRPRHRVPK True PC9_epitope_Rep3 1443.87596468911 1443.87486993586 96.379 2 -3.097143874165259 0.46313305806016686 1.0 ['ENST00000371933.7_1_1:47184401-47184626:-|nuORF'] 90805 12084 RKRYVYVW True NCI_RA007_Epitope_Rep2 1168.6505475858396 1168.64890490379 51.597 3 -3.097243618194229 0.46313305806016686 1.0 ['ENST00000525083.5_1_11:126145223-126146937:+|nuORF', 'nc|ENSG00000110074|Q96CU9-2|FOXRED1', 'nc|ENSG00000110074|Q96CU9-3|FOXRED1', 'ENSG00000110074|ENST00000263578|FOXRED1'] 110061 10978 THYKAPRMV True PC9_epitope_Rep4 1101.5753340402498 1101.57422993586 50.001 2 -3.099123720200009 0.46313305806016686 1.0 ['ENST00000415995.5_1_3:48636563-48647036:-|nuORF', 'ENSG00000010256|ENST00000203407|UQCRC1'] 91420 15282 RNKREFRRNLP True PC9_epitope_Rep1 1484.8436615013197 1484.8425699358602 63.604 2 -3.0998317464290834 0.46313305806016686 1.0 ['ENSG00000124201|ENST00000396105|ZNFX1', 'nc|ENSG00000124201|Q9P2E3-2|ZNFX1'] 91082 17710 RLLMLYTRKFE True NCI_RA007_Epitope_Rep1 1468.8224405912 1468.82134993586 73.025 2 -3.1018256456181916 0.46313305806016686 1.0 ['nc|ENSG00000102900|Q8N1F7-2|NUP93', 'ENSG00000102900|ENST00000308159|NUP93'] 43365 14990 IHLRKAGH True PC9_epitope_Rep4 930.55116789774 930.55006993586 65.598 2 -3.1031110268595663 0.46313383471318126 1.0 ['nc|ENSG00000182606|Q9UPV9-3|TRAK1'] 130047 24786 VTPVGAQK True PC9_epitope_Rep4 798.4599528514999 798.45884993586 103.84 2 -3.1037814793799314 0.46313383471318126 1.0 ['ENSG00000140396|ENST00000452400|NCOA2'] 119187 23441 VEKKKQIQH True PC9_epitope_Rep6 1136.6665915728 1136.66548993586 103.27 2 -3.112395147324047 0.463158005603185 1.0 ['nc|ENSG00000285253|Q6N043-2|ZNF280D', 'ENSG00000137871|ENST00000267807|ZNF280D', 'nc|ENSG00000285253|Q6N043-5|ZNF280D'] 123853 17959 VIYLQKLLR True PC9_epitope_Rep4 1144.7332145806397 1144.73155490379 77.133 3 -3.1153931457977673 0.463158005603185 1.0 ['nc|ENSG00000183833|Q7Z4T9-1|CFAP91', 'nc|ENSG00000183833|Q7Z4T9-6|CFAP91', 'nc|ENSG00000183833|Q7Z4T9-3|CFAP91', 'nc|ENSG00000183833|Q7Z4T9-8|CFAP91', 'ENST00000482927.5_1_3:119422024-119469941:+|nuORF', 'ENSG00000183833|ENST00000273390|CFAP91'] 90231 18270 RHLRRLPD True NCI_RA007_Epitope_Rep5 1061.62064443989 1061.61954993586 77.081 2 -3.1161670354562268 0.463158005603185 1.0 ['ENST00000476670.2_3_6:29599279-29600558:-|nuORF', 'ENST00000485508.5_1_6:29599279-29600271:-|nuORF'] 44008 23851 ILHYDETY True NCI_RA007_Epitope_Rep5 1052.4814761417201 1052.4803699358602 99.111 2 -3.117332201202561 0.463158005603185 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000528096.1_1_11:67766987-67770655:-|nuORF'] 52034 24425 KLGKAACY True PC9_epitope_Rep3 852.4527592960799 852.45166993586 99.277 2 -3.1187111112929613 0.463158005603185 1.0 ['nc|ENSG00000072195|Q15772-1|SPEG', 'ENSG00000072195|ENST00000312358|SPEG', 'ENST00000485069.1_1_2:220336438-220336879:+|nuORF'] 134841 5622 WYYEATSEW True PC9_epitope_Rep1 1233.4978544818498 1233.4967499358602 26.451 2 -3.121073132705779 0.463158005603185 1.0 ['nc|ENSG00000159063|Q9BVK2-2|ALG8', 'ENSG00000159063|ENST00000299626|ALG8'] 49223 25024 KGRFLLLM True H1975_Epitope_Rep2 976.5891931992398 976.58808993586 102.83 2 -3.1243510706308664 0.463158005603185 1.0 ['ENST00000567744.5_1_15:65891231-65891273:-|nuORF'] 113326 22552 TQKAATGP True PC9_epitope_Rep1 772.40791727864 772.4073649679301 91.551 1 -3.1260284601499735 0.463158005603185 1.0 ['nc|ENSG00000128872|Q9NZR1-2|TMOD2', 'ENSG00000128872|ENST00000249700|TMOD2'] 79041 23152 PFPIFISFL True NCI_RA007_Epitope_Rep5 1079.60555445603 1079.6044499358602 96.31 2 -3.1286451549774563 0.46316931372962045 1.0 ['ENST00000560775.5_2_15:44957989-44959306:-|nuORF'] 10541 25232 CPPPCSSV True PC9_epitope_Rep3 788.3196965212001 788.31858993586 102.43 2 -3.1310387730532336 0.46316931372962045 1.0 ['ENST00000270747.7_1_1:16534695-16539049:-|nuORF'] 76832 23426 NVGGKVIH True PC9_epitope_Rep6 822.47118624154 822.47008993586 103.21 2 -3.132724893411078 0.4631757432781119 1.0 ['nc|ENSG00000204463|P46379-2|BAG6', 'nc|ENSG00000204463|P46379|BAG6', 'ENSG00000204463|ENST00000676615|BAG6', 'nc|ENSG00000204463|P46379-4|BAG6', 'nc|ENSG00000204463|P46379-5|BAG6', 'BAG6|p.T391Nfs*29|2|0.15|ENSG00000204463|chr6:31645145-31645146|-/G|frameshift_variant'] 47978 20390 KAFSDAIK True NCI_RA007_Epitope_Rep4 878.4861675993399 878.48506993586 88.288 2 -3.135818780835231 0.4631757432781119 1.0 ['ENST00000404006.5_1_7:5024574-5028783:+|nuORF', 'ENST00000406608.2_1_7:5016050-5028783:+|nuORF'] 53544 20599 KVPKACLF True NCI_RA007_Epitope_Rep5 904.5204449330798 904.51934993586 86.176 2 -3.137916470526045 0.4631757432781119 1.0 ['ENSG00000228049|ENST00000333432|POLR2J2', 'nc|ENSG00000228049|Q9GZM3-2|POLR2J2'] 131213 23615 VVPPSSSL True NCI_RA007_Epitope_Rep4 784.4330693973201 784.43196993586 102.43 2 -3.140874015748817 0.4631813969163367 1.0 ['nc|ENSG00000165891|Q96AV8-2|E2F7', 'nc|ENSG00000165891|Q96AV8-3|E2F7', 'ENSG00000165891|ENST00000322886|E2F7'] 137826 17814 YPFPLPVF True NCI_RA007_Epitope_Rep5 978.5214904788999 978.52038993586 75.317 2 -3.1483893631818307 0.4631983571165289 1.0 ['ENSG00000145414|ENST00000274054|NAF1'] 92303 24802 RQLLAHFH True H1975_Epitope_Rep2 1020.5617325814399 1020.56062993586 101.96 2 -3.1503830681710903 0.4631983571165289 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 49146 23847 KGKKKTGGS True PC9_epitope_Rep1 889.5345147740899 889.53340993586 96.527 2 -3.1515372470725995 0.4631983571165289 1.0 ['ENSG00000204560|ENST00000376442|DHX16'] 68971 23892 LVGGPFLP True NCI_RA007_Epitope_Rep2 798.46397560278 798.46286993586 100.31 2 -3.1521066439848684 0.46320401027844477 1.0 ['ENST00000216252.3_1_22:41856152-41856401:-|nuORF'] 112735 23641 TPKESPHFYRK True PC9_epitope_Rep5 1388.7200836976397 1388.71898993586 95.914 2 -3.156163883230163 0.4632096633212928 1.0 ['ENSG00000104369|ENST00000342232|JPH1'] 32248 14964 GFLFLLIV True NCI_RA007_Epitope_Rep5 920.5735260517599 920.57242993586 64.225 2 -3.165581080956375 0.46323304866105747 1.0 ['SIDT1|p.R517L|1|0.25|ENSG00000072858|chr3:113608165-113608165|G/T|missense_variant', 'BOC-SIDT1|1|fusion', 'nc|ENSG00000072858|Q9NXL6-2|SIDT1', 'ENSG00000072858|ENST00000264852|SIDT1'] 131212 24755 VVPPSSSL True NCI_RA007_Epitope_Rep1 784.4330693973201 784.43196993586 102.49 2 -3.1690266938098626 0.46323304866105747 1.0 ['nc|ENSG00000165891|Q96AV8-2|E2F7', 'nc|ENSG00000165891|Q96AV8-3|E2F7', 'ENSG00000165891|ENST00000322886|E2F7'] 48063 25362 KAPKDPKLRE True PC9_epitope_Rep2 1180.6928063206399 1180.69227496793 103.23 1 -3.169826937800877 0.46323304866105747 1.0 ['PLCB1-MCM8|1|fusion', 'PLCB1-MCM8|2|fusion', 'nc|ENSG00000182621|Q9NQ66-2|PLCB1', 'ENSG00000182621|ENST00000338037|PLCB1'] 81834 13463 PSGRIESTRT True PC9_epitope_Rep1 1102.57308511078 1102.57198993586 56.643 2 -3.169986478566821 0.46323304866105747 1.0 ['ENSG00000101751|ENST00000579534|POLI'] 92946 25701 RRPPVPHP True PC9_epitope_Rep1 954.55116789774 954.55006993586 103.9 2 -3.170279578295317 0.46323304866105747 1.0 ['ENST00000340611.8_1_7:2581050-2581406:-|nuORF'] 93552 3911 RSRDRYWEKSN True PC9_epitope_Rep3 1495.7280226123896 1495.72636490379 20.149 3 -3.1726741377085728 0.46323304866105747 1.0 ['nc|ENSG00000173068|Q6ZN30-2|BNC2'] 54831 20148 LAFRGKMV True NCI_RA007_Epitope_Rep3 920.5265929426798 920.52548993586 87.801 2 -3.1777062671967973 0.46324923128764584 1.0 ['ENST00000568840.1_1_15:75182430-75185220:+|nuORF'] 136298 24303 YGTQGKPA True PC9_epitope_Rep3 820.4079172786398 820.40682993586 98.795 2 -3.178459453999719 0.46325000526504223 1.0 ['ENST00000403332.2_1_6:129478670-129479855:-|nuORF'] 123241 26798 VHMPEGLF True PC9_epitope_Rep3 928.4476739156399 928.44656993586 109.9 2 -3.179152438350378 0.46325000526504223 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 118371 23766 VDIKKPLV True NCI_RA007_Epitope_Rep4 910.5851533646199 910.58404993586 103.03 2 -3.181489191288341 0.4632767171754399 1.0 ['ENSG00000100294|ENST00000290429|MCAT'] 28692 5450 FSTHHPRP True PC9_epitope_Rep5 977.4831479075699 977.48204993586 25.975 2 -3.1829627284153976 0.46329289866060147 1.0 ['ENST00000474433.5_1_7:105254161-105283525:-|nuORF', 'nc|ENSG00000146776|Q9ULK2-3|ATXN7L1', 'ENSG00000146776|ENST00000419735|ATXN7L1'] 109761 16106 THIQLQFQPLA True NCI_RA007_Epitope_Rep1 1294.70337100434 1294.7022699358602 66.754 2 -3.18677465442785 0.4632993229512167 1.0 ['ENSG00000188107|ENST00000503581|EYS', 'nc|ENSG00000188107|Q5T1H1|EYS', 'SESN1-EYS|1|fusion'] 65974 18983 LSLRQVSHPRR True PC9_epitope_Rep2 1347.7847496428699 1347.78364993586 78.383 2 -3.1882881374626697 0.4632993229512167 1.0 ['ENST00000545054.6_1_14:24563583-24563937:+|nuORF'] 71238 3226 MFWTFKEWFW True NCI_RA007_Epitope_Rep1 1506.6794647556198 1506.67780490379 16.443 3 -3.1911298734440092 0.4632993229512167 1.0 ['ENSG00000154227|ENST00000679737|CERS3'] 33432 8137 GLGFRHRP True PC9_epitope_Rep3 938.51986776946 938.51876993586 36.278 2 -3.1917148033594804 0.463315503516826 1.0 ['PDZD2|p.S1116F|1|0.12|ENSG00000133401|chr5:32074453-32074453|C/T|missense_variant'] 123234 25646 VHMPEGLF True NCI_RA007_Epitope_Rep5 928.4476739156399 928.44656993586 106.19 2 -3.2011956367613017 0.46333168374169503 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 45292 9078 ISAHHQLLHQ True PC9_epitope_Rep5 1182.6257893899801 1182.62468993586 39.864 2 -3.205645790088248 0.4633429849960516 1.0 ['ENST00000355508.3_1_7:2966407-2969665:-|nuORF', 'ENST00000396946.8_1_7:2966407-2969665:-|nuORF'] 123237 26587 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 108.0 2 -3.2058247848003463 0.4633429849960516 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 79738 10139 PHSLSPEKAS True PC9_epitope_Rep5 1051.52982331647 1051.5287299358602 43.984 2 -3.207970391057151 0.46334940723114826 1.0 ['ENSG00000225556|ENST00000694868|C2CD4D'] 134849 7462 WYYYSLRFYST True PC9_epitope_Rep2 1547.7085159544297 1547.7074099358601 34.076 2 -3.210286464977015 0.46334940723114826 1.0 ['nc|ENSG00000120498|Q8IYF3-2|TEX11', 'ENSG00000120498|ENST00000374333|TEX11', 'nc|ENSG00000120498|Q8IYF3|TEX11'] 127767 11223 VRKKEEPA True PC9_epitope_Rep5 955.5450794577898 955.5439899358599 48.159 2 -3.212116241941012 0.46334940723114826 1.0 ['nc|ENSG00000183780|Q8IY50|SLC35F3', 'ENSG00000183780|ENST00000366618|SLC35F3'] 35208 11121 GSGGGVGHGP True PC9_epitope_Rep1 780.3514650316799 780.35036993586 47.662 2 -3.214154784022105 0.4633550574337485 1.0 ['ENST00000502555.5_1_17:48244836-48246708:+|nuORF'] 88544 14317 RAGFKAGG True PC9_epitope_Rep5 762.4136713654199 762.41256993586 60.072 2 -3.217229394789637 0.46337200732770417 1.0 ['LRRC40|p.L310Gfs*8|1|0.16|ENSG00000066557|chr1:70175854-70175860|TAGTAGT/-|frameshift_variant', 'ENSG00000066557|ENST00000370952|LRRC40'] 11481 18832 DGEDQNDP True PC9_epitope_Rep2 888.3097193589999 888.30862993586 77.806 2 -3.218306524548741 0.46337200732770417 1.0 ['nc|ENSG00000205189|Q96DT7-4|ZBTB10', 'nc|ENSG00000205189|Q96DT7-3|ZBTB10', 'nc|ENSG00000205189|Q96DT7-2|ZBTB10', 'ENSG00000205189|ENST00000455036|ZBTB10'] 78778 24929 PEKLKLLA True NCI_RA007_Epitope_Rep1 910.5851533646199 910.5846049679301 103.17 1 -3.219453170620311 0.46337200732770417 1.0 ['nc|ENSG00000100029|O00541-2|PES1', 'ENSG00000100029|ENST00000354694|PES1', 'ENST00000488719.1_1_22:30975561-30975981:-|nuORF'] 126566 20243 VPPKVTTT True PC9_epitope_Rep6 841.4909186266101 841.48982993586 90.549 2 -3.2219727457077503 0.4633727785732334 1.0 ['ENSG00000113249|ENST00000523175|HAVCR1'] 123240 26090 VHMPEGLF True PC9_epitope_Rep3 928.4476739156399 928.44656993586 106.29 2 -3.2226290944032496 0.4633727785732334 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 38425 16210 HGRRSNVL True PC9_epitope_Rep1 937.5205960454499 937.51948993586 67.169 2 -3.2261810392935995 0.4633784281728694 1.0 ['nc|ENSG00000178053|P58340-2|MLF1', 'nc|ENSG00000178053|P58340-5|MLF1', 'nc|ENSG00000178053|P58340-4|MLF1', 'nc|ENSG00000178053|P58340|MLF1', 'ENSG00000178053|ENST00000466246|MLF1', 'nc|ENSG00000178053|P58340-3|MLF1'] 123238 26889 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 109.45 2 -3.2300096769448827 0.4633928101479025 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 81634 23780 PRRRRRREER True PC9_epitope_Rep2 1465.85629187369 1465.85464490379 96.941 3 -3.231389968822489 0.4633928101479025 1.0 ['ENST00000361198.9_1_10:103874266-103874668:-|nuORF'] 91982 5215 RPREALSTNEC True PC9_epitope_Rep5 1274.6037336160598 1274.60209490379 25.077 3 -3.231651215097115 0.4633928101479025 1.0 ['AGPS-HNRNPA3|1|fusion', 'AGPS-HNRNPA3|2|fusion', 'AGPS|p.R117Gfs*22|1|0.11|ENSG00000018510|chr2:177420351-177420351|G/-|frameshift_variant', 'ENSG00000018510|ENST00000264167|AGPS'] 33180 24609 GKVKAPLL True NCI_RA007_Epitope_Rep3 824.5483739330799 824.54726993586 106.43 2 -3.239785692222933 0.4633928101479025 1.0 ['ENSG00000131944|ENST00000588258|FAAP24'] 48064 25094 KAPPAKVL True NCI_RA007_Epitope_Rep5 822.53272386894 822.53217496793 104.03 1 -3.241445033847753 0.4633928101479025 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 92683 14363 RRGRRRCWTWC True PC9_epitope_Rep3 1534.7622574598197 1534.7611499358602 60.339 2 -3.243734824115824 0.4633928101479025 1.0 ['ENST00000598755.1_1_19:52104480-52104837:+|nuORF'] 32582 6092 GHAKSSFG True PC9_epitope_Rep5 789.37695150353 789.37584993586 28.422 2 -3.2459738450095426 0.4633928101479025 1.0 ['ENST00000509911.2_1_9:37007519-37007720:+|nuORF'] 49549 23437 KKHAIGIY True NCI_RA007_Epitope_Rep3 928.5494365622399 928.54832993586 101.73 2 -3.2477808850563057 0.4633928101479025 1.0 ['ENSG00000101134|ENST00000262593|DOK5'] 26135 26850 FHIRRKRY True PC9_epitope_Rep1 1174.6835790496198 1174.68248993586 109.25 2 -3.2483554664669523 0.4633928101479025 1.0 ['nc|ENSG00000156103|P51512-2|MMP16', 'MMP16|p.A121S|1|0.37|ENSG00000156103|chr8:88186519-88186519|C/A|missense_variant', 'ENST00000520568.1_1_8:89198619-89339435:-|nuORF', 'MMP16|p.I289Yfs*62|1|0.31|ENSG00000156103|chr8:88118707-88118707|C/-|frameshift_variant', 'MMP16|p.T451Pfs*16|1|0.21|ENSG00000156103|chr8:88056154-88056154|C/-|frameshift_variant', 'ENSG00000156103|ENST00000286614|MMP16'] 23550 13000 EWWFRWRLDRY True H1975_Epitope_Rep1 1711.8371791385498 1711.8360899358602 55.086 2 -3.250863663187973 0.4633928101479025 1.0 ['CASD1|p.A701Lfs*8|1|0.21|ENSG00000127995|chr7:94554549-94554549|G/-|frameshift_variant', 'ENSG00000127995|ENST00000297273|CASD1'] 123235 1727 VHMPEGLF True PC9_epitope_Rep1 928.4476739156399 928.44656993586 9.5032 2 -3.2590962850150866 0.4634089856415007 1.0 ['ENST00000467061.1_1_3:185212881-185213145:-|nuORF'] 45224 14940 IRKSEYTQ True PC9_epitope_Rep1 1023.53490869691 1023.53380993586 62.289 2 -3.264352504268333 0.46342028253226386 1.0 ['ENSG00000198231|ENST00000389924|DDX42', 'nc|ENSG00000198231|Q86XP3-2|DDX42'] 60890 24730 LKRKQRRYRTT True NCI_RA007_Epitope_Rep5 1504.9062617578797 1504.9051699358602 102.61 2 -3.2644768708692267 0.46342028253226386 1.0 ['ENSG00000004848|ENST00000379044|ARX'] 9467 12320 AVWYFPFGI True NCI_RA007_Epitope_Rep3 1098.5538532363398 1098.5527499358602 55.638 2 -3.2792852997578086 0.4634736842105263 1.0 ['ENSG00000162383|ENST00000371494|SLC1A7'] 133589 14169 WIFYRKLFFFF True NCI_RA007_Epitope_Rep1 1612.8594777229193 1612.85838993586 59.15 2 -3.2801962678833116 0.4634736842105263 1.0 ['ENST00000535340.5_1_11:18591643-18610207:-|nuORF'] 124019 25152 VKLLVQVL True H1975_Epitope_Rep3 910.62153887334 910.6209949679301 104.63 1 -3.2883483501926856 0.46350038420648204 1.0 ['ENSG00000268320|ENST00000595228|SCGB1C2', 'ENSG00000188076|ENST00000342878|SCGB1C1'] 121058 2709 VGFRCRGH True PC9_epitope_Rep3 930.4606386411799 930.45954993586 14.881 2 -3.3034105274445493 0.4635481358287194 1.0 ['SECISBP2L|p.A823Qfs*12|1|0.13|ENSG00000138593|chr15:48996524-48996524|A/-|frameshift_variant', 'ENSG00000138593|ENST00000559471|SECISBP2L', 'SECISBP2L|p.P614Hfs*12|1|0.22|ENSG00000138593|chr15:49011754-49011754|G/-|frameshift_variant'] 70709 14856 MDQLVFLL True NCI_RA007_Epitope_Rep4 977.5255898831699 977.52448993586 64.606 2 -3.3086249305305437 0.46355942907667047 1.0 ['ENST00000553077.5_1_16:68224994-68225093:+|nuORF'] 122285 23514 VGRSHAIGP True PC9_epitope_Rep2 892.4878989348398 892.48680993586 95.919 2 -3.312056768363763 0.46355942907667047 1.0 ['FRG1|p.D130H|1|0.19|ENSG00000109536|chr4:189955107-189955107|G/C|missense_variant'] 65716 15885 LSHQHRFL True PC9_epitope_Rep5 1036.5566472009998 1036.5555499358602 66.091 2 -3.3178430079205827 0.46356584251686717 1.0 ['PKD1L1|p.L2667Q|1|0.49|ENSG00000158683|chr7:47800842-47800842|A/T|missense_variant'] 79435 9616 PGPHGPNG True PC9_epitope_Rep3 731.33508669155 731.33453496793 41.938 1 -3.328007647431261 0.46356584251686717 1.0 ['ENSG00000204262|ENST00000374866|COL5A2'] 59081 9897 LGDSKINKK True PC9_epitope_Rep4 1001.58694426977 1001.58637496793 45.72 1 -3.3293963701068696 0.46356584251686717 1.0 ['ENSG00000133884|ENST00000528416|DPF2', 'ENST00000531989.1_1_11:65113420-65116337:+|nuORF', 'ENST00000524666.5_1_11:65113195-65113594:+|nuORF'] 133342 12576 WEWRYRLYRRM True NCI_RA007_Epitope_Rep1 1713.8674337210098 1713.8663299358602 52.898 2 -3.333696397711677 0.46358201414617717 1.0 ['ENSG00000153930|ENST00000682825|ANKFN1', 'nc|ENSG00000153930|Q8N957-2|ANKFN1'] 128622 20774 VSLAGARR True PC9_epitope_Rep2 828.49298431528 828.49188993586 85.349 2 -3.3365668866664224 0.46359818543506404 1.0 ['ENST00000596597.5_1_19:58757693-58758161:+|nuORF', 'ENST00000598880.5_1_19:58740873-58772232:+|nuORF'] 76742 22969 NTSRCPAP True H1975_Epitope_Rep2 844.3861362882399 844.38502993586 94.799 2 -3.3434311736963047 0.4636312925599655 1.0 ['ENSG00000215182|ENST00000621226|MUC5AC'] 84354 15298 QGAEAKAP True PC9_epitope_Rep1 770.3922672144998 770.39116993586 63.665 2 -3.3462780583189145 0.4636312925599655 1.0 ['ENSG00000164626|ENST00000359534|KCNK5'] 53820 18050 KYFSGPEPQA True PC9_epitope_Rep5 1122.53457434374 1122.53346993586 74.444 2 -3.346444930817704 0.4636312925599655 1.0 ['ENST00000575787.1_1_17:6802758-6803315:+|nuORF'] 61661 26036 LLHLLIPD True PC9_epitope_Rep1 932.56950330048 932.56895496793 105.38 1 -3.346796896400417 0.4636312925599655 1.0 ['ENST00000513372.5_1_4:2256680-2256926:-|nuORF'] 90901 8283 RLDEYWDRQRN True H1975_Epitope_Rep1 1549.73858729609 1549.7374899358601 36.794 2 -3.3523175782624426 0.46364746247921357 1.0 ['ENST00000471162.5_1_3:49044864-49051550:+|nuORF', 'ENST00000420783.7_1_3:49044839-49051550:+|nuORF', 'WDR6|p.Q795Rfs*14|1|0.15|ENSG00000178252|chr3:49013916-49013921|TCAGCC/A|frameshift_variant', 'ENSG00000178252|ENST00000608424|WDR6'] 79996 12973 PKDISDDH True PC9_epitope_Rep1 925.4141248578901 925.41302993586 54.773 2 -3.3618945586950897 0.4636741567120981 1.0 ['nc|ENSG00000198276|Q9NWZ5-4|UCKL1', 'ENSG00000198276|ENST00000354216|UCKL1', 'ENST00000358711.7_1_20:62571331-62572425:-|nuORF'] 74488 6700 NKLQYFMEQFY True NCI_RA007_Epitope_Rep2 1509.6962370185697 1509.6951299358602 30.675 2 -3.3654377054217535 0.46367980129662373 1.0 ['nc|ENSG00000253729|P78527-2|PRKDC', 'ENSG00000253729|ENST00000314191|PRKDC', 'PRKDC|p.V1339Sfs*11|1|0.21|ENSG00000253729|chr8:47890313-47890313|C/-|frameshift_variant', 'PRKDC|p.G1544Afs*29|1|0.19|ENSG00000253729|chr8:47886089-47886089|C/-|frameshift_variant'] 81838 9410 PSGTFLVRRHR True PC9_epitope_Rep2 1324.7476358581598 1324.74652993586 41.536 2 -3.3667814373430676 0.4636854457623373 1.0 ['ENST00000533685.1_1_11:64900480-64900579:-|nuORF'] 56861 26866 LEDKIPRHVI True PC9_epitope_Rep5 1218.70845638478 1218.70734993586 109.73 2 -3.371205346574155 0.4636910901092425 1.0 ['ENST00000333017.6_1_2:99863168-99871557:-|nuORF'] 106061 14945 SVLTKHKV True PC9_epitope_Rep5 910.5600012459399 910.55890993586 62.488 2 -3.3947355431038275 0.46371443003872703 1.0 ['ENSG00000160321|ENST00000397126|ZNF208', 'nc|ENSG00000160321|O43345-2|ZNF208'] 89298 6207 RELQILPRV True PC9_epitope_Rep4 1122.6873270173799 1122.68569490379 30.917 3 -3.394762763528733 0.46371443003872703 1.0 ['ENSG00000131848|ENST00000683990|ZSCAN5A', 'nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A'] 94858 12389 RYMRTWLEPLS True H1975_Epitope_Rep3 1450.73910489006 1450.7380099358602 52.842 2 -3.3970435075803427 0.46371443003872703 1.0 ['ENSG00000180806|ENST00000303450|HOXC9'] 79931 12261 PIQGKKADSV True PC9_epitope_Rep2 1041.58185888933 1041.5807699358602 52.473 2 -3.398425407377899 0.46371443003872703 1.0 ['ENSG00000125844|ENST00000377813|RRBP1'] 113964 22777 TRKKTRKRR True PC9_epitope_Rep6 1228.7952547569198 1228.79467496793 100.7 1 -3.4000439962754503 0.46371443003872703 1.0 ['ENST00000361675.6_2_7:134618055-134618145:+|nuORF'] 134291 22214 WRSRLGRVMY True PC9_epitope_Rep6 1322.7029941648598 1322.7018899358602 98.403 2 -3.4021154000381175 0.46371443003872703 1.0 ['ENSG00000171853|ENST00000324266|TRAPPC12', 'ENST00000462983.5_1_2:3447569-3464471:+|nuORF', 'ENST00000479897.5_1_2:3447569-3469487:+|nuORF', 'ENST00000469147.5_1_2:3428415-3471239:+|nuORF'] 133759 18532 WLLRLWTLYTW True PC9_epitope_Rep2 1549.84455593477 1549.84344993586 76.632 2 -3.4057544929833496 0.46373624060783364 1.0 ['ENST00000507414.1_1_5:7890477-7893647:+|nuORF'] 92734 25035 RRKKVNHHFLS True PC9_epitope_Rep5 1420.8163841243202 1420.8152899358602 101.44 2 -3.4061045262436096 0.46373624060783364 1.0 ['ENST00000489108.1_1_1:22084083-22109432:-|nuORF'] 52893 26790 KRGCRQAFHV True PC9_epitope_Rep1 1200.6298292246 1200.62872993586 108.97 2 -3.4105736732444214 0.46375240721058225 1.0 ['MLLT10|p.H160R|1|0.22|ENSG00000078403|chr10:21612421-21612421|A/G|missense_variant'] 95882 24188 SDRKKRAL True PC9_epitope_Rep4 972.5828619488399 972.58176993586 101.52 2 -3.41846827152913 0.463758813006419 1.0 ['nc|ENSG00000115761|Q9BSC4-2|NOL10', 'nc|ENSG00000115761|Q9BSC4-4|NOL10', 'ENSG00000115761|ENST00000381685|NOL10'] 23532 19011 EWRRRKEKL True PC9_epitope_Rep1 1299.7523868854298 1299.75073490379 77.914 3 -3.4191176324127035 0.463758813006419 1.0 ['ENSG00000142459|ENST00000538904|EVI5L', 'nc|ENSG00000142459|Q96CN4|EVI5L'] 103293 10241 SQTQKAKFS True PC9_epitope_Rep5 1023.5349086969098 1023.5343749679301 44.379 1 -3.421270312960828 0.463758813006419 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 118812 18657 VEEESKKL True PC9_epitope_Rep5 960.5127762699999 960.51166993586 76.789 2 -3.42713412761403 0.4637595757218621 1.0 ['USP6NL|p.E558Sfs*62|1|0.37|ENSG00000148429|chr10:11463256-11463256|C/-|frameshift_variant', 'ENSG00000148429|ENST00000609104|USP6NL', 'nc|ENSG00000148429|Q92738-2|USP6NL'] 27589 24415 FPRRRRRR True NCI_RA007_Epitope_Rep3 1198.7384085871397 1198.7373099358601 105.67 2 -3.4301562087944895 0.4637595757218621 1.0 ['ENST00000222747.7_1_7:120497939-120498116:-|nuORF'] 115181 13211 TVAQETKGP True PC9_epitope_Rep2 929.4818104948899 929.48070993586 56.095 2 -3.432119497057007 0.46376033840520237 1.0 ['ENST00000528293.1_1_19:17953965-17958870:-|nuORF'] 65677 13186 LSHDLDHR True PC9_epitope_Rep5 991.4835418303901 991.48244993586 55.725 2 -3.433151660043783 0.46376033840520237 1.0 ['PDE5A|p.Q666Sfs*25|1|0.2|ENSG00000138735|chr4:119519050-119519050|T/-|frameshift_variant', 'nc|ENSG00000138735|O76074-2|PDE5A', 'ENSG00000138735|ENST00000354960|PDE5A', 'ENST00000513594.5_1_4:120438269-120460171:-|nuORF'] 68362 17772 LTSLRKLWLMH True NCI_RA007_Epitope_Rep5 1396.8013112238 1396.80020993586 75.146 2 -3.4490546977236494 0.463787025832588 1.0 ['ENSG00000131409|ENST00000652263|LRRC4B', 'LRRC4B|p.G469Afs*22|1|0.4|ENSG00000131409|chr19:50518307-50518307|C/-|frameshift_variant'] 120941 6517 VGEKFRARS True PC9_epitope_Rep5 1048.5777765683997 1048.57666993586 30.04 2 -3.4522810568845483 0.4638031903699651 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 52892 26679 KRGCRQAFHV True PC9_epitope_Rep1 1200.6298292246 1200.62872993586 108.44 2 -3.4634041574053356 0.46380395210336917 1.0 ['MLLT10|p.H160R|1|0.22|ENSG00000078403|chr10:21612421-21612421|A/G|missense_variant'] 101472 24039 SNPRISCP True H1975_Epitope_Rep2 872.41743641652 872.41632993586 98.991 2 -3.465686567221565 0.46380395210336917 1.0 ['REG1B|p.P30S|1|0.18|ENSG00000172023|chr2:79086907-79086907|G/A|missense_variant'] 69768 10155 LWMWWRRNRRG True NCI_RA007_Epitope_Rep2 1615.8418876795097 1615.8407899358601 44.089 2 -3.473172260108143 0.4638095939561654 1.0 ['ENSG00000158220|ENST00000389567|ESYT3', 'ENST00000486831.5_1_3:138153640-138188991:+|nuORF', 'nc|ENSG00000158220|A0FGR9-2|ESYT3', 'ESYT3-RPN1|1|fusion'] 74468 25538 NKHQIKKAV True PC9_epitope_Rep3 1064.6454622054 1064.64487496793 103.7 1 -3.483599702956324 0.46382575757575756 1.0 ['ENST00000498752.1_1_11:43740306-43740693:+|nuORF'] 37159 13717 GVTKRGETL True PC9_epitope_Rep2 959.5399940773499 959.53888993586 58.053 2 -3.487290790552139 0.46385244263002284 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'SYNE1|p.M5602Nfs*13|1|0.27|ENSG00000131018|chr6:152310779-152310780|-/T|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-7|SYNE1', 'ENST00000461872.6_1_6:152697909-152949466:-|nuORF', 'nc|ENSG00000131018|Q8NF91-10|SYNE1', 'SYNE1|p.I2045Mfs*6|1|0.12|ENSG00000131018|chr6:152413447-152413447|A/-|frameshift_variant', 'nc|ENSG00000131018|Q8NF91-6|SYNE1', 'nc|ENSG00000131018|Q8NF91-5|SYNE1', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 23046 11551 EVKQEEVVK True PC9_epitope_Rep2 1086.5920892198599 1086.59098993586 49.757 2 -3.500640042853231 0.46391633260734616 1.0 ['ENSG00000055813|ENST00000407595|CCDC85A'] 72686 18181 MYIPILFL True NCI_RA007_Epitope_Rep5 1008.5718117995999 1008.57070993586 76.741 2 -3.50707338374725 0.46391633260734616 1.0 ['ENST00000509089.1_1_4:62453105-62542754:+|nuORF'] 35868 5193 GVADPASRKD True PC9_epitope_Rep3 1014.50942222506 1014.50832993586 25.058 2 -3.5126563841604788 0.463917091903835 1.0 ['ENST00000221930.5_1_19:41859248-41859455:-|nuORF'] 93919 8965 RVKEYFSWLYY True H1975_Epitope_Rep3 1552.77145056416 1552.7703499358602 39.479 2 -3.5141783933570085 0.463917091903835 1.0 ['ENSG00000196542|ENST00000620149|SPTSSB'] 92193 17946 RQGLQVSHTQ True PC9_epitope_Rep3 1152.59996856496 1152.5983349037901 74.233 3 -3.5191820625817107 0.46393325337205144 1.0 ['ENST00000420329.6_1_15:91186107-91186239:+|nuORF'] 36678 10914 GVLTQKKP True PC9_epitope_Rep3 869.5334521449298 869.53234993586 46.963 2 -3.5304500299787 0.46394453328844376 1.0 ['ENSG00000183421|ENST00000332512|RIPK4', 'nc|ENSG00000183421|P57078|RIPK4'] 17724 8469 EHSRPPRLR True PC9_epitope_Rep1 1146.6370227800198 1146.63538490379 37.411 3 -3.5324354521324053 0.46394453328844376 1.0 ['ENST00000396465.5_1_8:74206146-74206593:-|nuORF'] 60795 23591 LKGWWQKFRL True PC9_epitope_Rep5 1360.77681072812 1360.77627496793 95.724 1 -3.5422101868600233 0.46395017306862774 1.0 ['ENSG00000146205|ENST00000674324|ANO7', 'nc|ENSG00000146205|Q6IWH7|ANO7', 'nc|ENSG00000146205|Q6IWH7-3|ANO7'] 47805 18351 IYRRWHNP True PC9_epitope_Rep2 1140.59409533888 1140.59298993586 75.918 2 -3.548006195529727 0.463955812730142 1.0 ['MTNR1B|p.T157N|1|0.3|ENSG00000134640|chr11:92981693-92981693|C/A|missense_variant'] 85268 5322 QKRHKNRFWI True PC9_epitope_Rep2 1411.79492040375 1411.79326490379 25.86 3 -3.5616454838091123 0.46395884617812283 1.0 ['ENST00000303329.8_1_15:80888135-80888297:+|nuORF'] 97924 11530 SHNSYTIT True H1975_Epitope_Rep3 921.4192102383302 921.41866496793 49.476 1 -3.562003795853473 0.46395884617812283 1.0 ['F13A1|p.R547S|1|0.42|ENSG00000124491|chr6:6174688-6174688|G/T|missense_variant'] 46023 14876 ISVKKEHI True PC9_epitope_Rep5 952.57056592964 952.56946993586 62.224 2 -3.5658847468570856 0.46395884617812283 1.0 ['PDHX|p.P170S|1|0.27|ENSG00000110435|chr11:34957549-34957549|C/T|missense_variant'] 43643 18866 IILFGWII True NCI_RA007_Epitope_Rep4 973.6000751527699 973.5989699358599 81.591 2 -3.566156718113989 0.46395884617812283 1.0 ['ENSG00000261115|ENST00000565468|TMEM178B'] 55327 13085 LARVKQEEQRY True PC9_epitope_Rep2 1418.7630111387798 1418.76190993586 55.608 2 -3.5687104003500942 0.46395884617812283 1.0 ['nc|ENSG00000147526|O75410-3|TACC1', 'ENSG00000147526|ENST00000317827|TACC1', 'nc|ENSG00000147526|O75410-2|TACC1', 'nc|ENSG00000147526|O75410-5|TACC1', 'nc|ENSG00000147526|O75410-4|TACC1', 'nc|ENSG00000147526|O75410-6|TACC1', 'nc|ENSG00000147526|O75410-7|TACC1', 'nc|ENSG00000147526|O75410-9|TACC1', 'nc|ENSG00000147526|O75410-10|TACC1', 'ENST00000521568.1_1_8:38697778-38700914:+|nuORF', 'nc|ENSG00000147526|O75410-8|TACC1'] 31010 16371 GAVATRDGEAP True PC9_epitope_Rep2 1042.50433684462 1042.5032299358602 68.215 2 -3.576850902526471 0.46395884617812283 1.0 ['RAB37|p.V136Tfs*3|2|0.12|ENSG00000172794|chr17:74744344-74744345|-/AT|frameshift_variant', 'ENST00000527040.5_1_17:72733375-72740608:+|nuORF', 'nc|ENSG00000172794|Q96AX2-4|RAB37', 'ENSG00000172794|ENST00000392613|RAB37'] 133676 23424 WKVVRKGRRQ True PC9_epitope_Rep3 1311.8000057841898 1311.79837490379 95.377 3 -3.5772672852520984 0.46395884617812283 1.0 ['ENSG00000181007|ENST00000392161|ZFP82'] 113963 24766 TRKKTRKRR True PC9_epitope_Rep3 1228.7952547569198 1228.79467496793 100.64 1 -3.5847056315789865 0.46395884617812283 1.0 ['ENST00000361675.6_2_7:134618055-134618145:+|nuORF'] 111296 15051 TLHKSVVK True PC9_epitope_Rep1 910.5600012459399 910.55890993586 62.711 2 -3.5883663571684585 0.4639765208335525 1.0 ['ACTR2-TSGA10|1|fusion', 'ENSG00000135951|ENST00000393483|TSGA10', 'ENST00000489546.5_1_2:99635091-99688291:-|nuORF'] 94859 12993 RYMRTWLEPLS True NCI_RA007_Epitope_Rep2 1450.73910489006 1450.7380099358602 55.165 2 -3.5894629502592217 0.4639765208335525 1.0 ['ENSG00000180806|ENST00000303450|HOXC9'] 85604 19543 QLMMKISV True NCI_RA007_Epitope_Rep2 948.5136453004799 948.51254993586 80.959 2 -3.605192460893436 0.4639765208335525 1.0 ['ENST00000244230.6_1_2:71360149-71360302:+|nuORF'] 127158 2632 VQELAATHH True PC9_epitope_Rep2 1004.5039429218 1004.5033749679301 14.773 1 -3.6063022274681416 0.4639765208335525 1.0 ['SPTA1|p.A1704T|1|0.34|ENSG00000163554|chr1:158638112-158638112|C/T|missense_variant'] 91464 2147 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 11.891 3 -3.6073898009710876 0.4639765208335525 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 91466 2427 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 13.438 3 -3.611687522668643 0.46397803654264885 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 133836 14212 WLWRKWLIQYF True NCI_RA007_Epitope_Rep1 1637.8870894530899 1637.8859899358602 59.317 2 -3.616893357821278 0.46397803654264885 1.0 ['ENST00000356721.3_1_16:48396017-48396254:-|nuORF'] 81839 9498 PSGTFLVRRHR True PC9_epitope_Rep2 1324.7476358581598 1324.74652993586 41.876 2 -3.6216551691575645 0.46397803654264885 1.0 ['ENST00000533685.1_1_11:64900480-64900579:-|nuORF'] 127898 22345 VRPHFPIYL True PC9_epitope_Rep4 1140.64439957624 1140.64276490379 94.186 3 -3.628151920391518 0.46397803654264885 1.0 ['ENST00000306353.7_2_2:85829070-85829145:-|nuORF'] 90650 23118 RKKRFEKQ True PC9_epitope_Rep5 1118.6672602791398 1118.6661699358601 93.911 2 -3.6333249702347006 0.46398931302527635 1.0 ['ENSG00000164695|ENST00000297265|CHMP4C'] 73386 7560 NERDYRDRRYV True PC9_epitope_Rep1 1540.74948633296 1540.7478449037899 33.897 3 -3.634517620338422 0.46398931302527635 1.0 ['ENSG00000113240|ENST00000316308|CLK4', 'ENST00000520878.5_1_5:178045553-178050259:-|nuORF', 'ENST00000520126.1_1_5:178045553-178054033:-|nuORF', 'ENST00000520199.5_1_5:178044267-178054033:-|nuORF'] 37629 5979 HAAPPSNP True PC9_epitope_Rep3 789.3769515035301 789.37584993586 28.054 2 -3.6420289066084544 0.4639957085156513 1.0 ['ENSG00000166004|ENST00000325212|CEP295', 'nc|ENSG00000166004|Q9C0D2-3|CEP295'] 12448 14134 DKLSLPHKK True PC9_epitope_Rep5 1064.63422881536 1064.63312993586 59.378 2 -3.64273832446345 0.4639957085156513 1.0 ['ENST00000400198.7_2_13:107209448-107211901:-|nuORF'] 128768 4859 VSQQKHQL True PC9_epitope_Rep5 966.5246783663799 966.52358993586 23.731 2 -3.6466241023147385 0.4639957085156513 1.0 ['ENST00000269159.7_1_18:11999083-11999119:+|nuORF'] 10149 3805 CCCCCCSC True PC9_epitope_Rep3 826.10688658094 826.10578993586 19.738 2 -3.65774197805527 0.46400210360241917 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 93374 25111 RRVVFWERRRR True PC9_epitope_Rep3 1614.9443786020997 1614.94328993586 101.94 2 -3.6583675351067324 0.46400210360241917 1.0 ['ENST00000495311.1_1_4:57844993-57845074:+|nuORF'] 119701 17683 VETDQRKM-[Oxidation] True PC9_epitope_Rep3 1021.4862446327699 1021.48514993586 73.213 2 -3.6611491532584437 0.46400210360241917 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 117688 9432 VAKKREEL True PC9_epitope_Rep2 971.5763795860698 971.57528993586 41.619 2 -3.6713840204505073 0.46403929487988554 1.0 ['nc|ENSG00000047849|P27816-3|MAP4', 'ENST00000497735.1_1_3:47918864-47932940:-|nuORF'] 91465 2269 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 12.576 3 -3.692058559694521 0.46409752095669826 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 101700 5821 SPGHCACC True PC9_epitope_Rep5 776.24040065468 776.23985496793 27.384 1 -3.6957193217210498 0.46410315740760216 1.0 ['ENST00000437354.1_1_7:3304323-3341903:-|nuORF'] 49066 24467 KFRARSLK True PC9_epitope_Rep4 1004.6243328379999 1004.62322993586 102.6 2 -3.697919544893252 0.46410879373994257 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 48324 5064 KDRISREEME True PC9_epitope_Rep5 1291.6190493270299 1291.61740490379 24.505 3 -3.7133463243695135 0.46416701724863274 1.0 ['ENST00000605810.1_1_3:70174416-70174620:-|nuORF'] 86338 20927 QQKEQELQQTL True NCI_RA007_Epitope_Rep1 1371.6994078227096 1371.6983099358602 85.641 2 -3.720093713158476 0.4641831701391445 1.0 ['nc|ENSG00000178209|Q15149-3|PLEC', 'nc|ENSG00000178209|Q15149-2|PLEC', 'nc|ENSG00000178209|Q15149-7|PLEC', 'nc|ENSG00000178209|Q15149-8|PLEC', 'nc|ENSG00000178209|Q15149-9|PLEC', 'nc|ENSG00000178209|Q15149-5|PLEC', 'ENSG00000178209|ENST00000345136|PLEC', 'nc|ENSG00000178209|Q15149-6|PLEC', 'nc|ENSG00000178209|Q15149|PLEC', 'PLEC|p.Q3864Dfs*4|1|0.1|ENSG00000178209|chr8:143918597-143918643|GCCGCTCCCCCTTCACCGGGTCCAGCAGGAAGCCTGTGGCTGCCTGT/-|frameshift_variant'] 45985 11790 ISTASRRHF True PC9_epitope_Rep5 1073.5730255411302 1073.57192993586 50.347 2 -3.72508217158869 0.46418880545213603 1.0 ['ENSG00000112695|ENST00000684430|COX7A2'] 78654 21840 PEAAGARQSPS True PC9_epitope_Rep5 1069.51523588149 1069.51467496793 89.042 1 -3.733107212304902 0.46421547490087606 1.0 ['ENST00000200457.8_1_7:100464947-100465525:+|nuORF', 'ENST00000437505.5_1_7:100465025-100465781:+|nuORF', 'ENST00000496260.1_1_7:100465025-100465611:+|nuORF', 'ENST00000417475.5_1_7:100465025-100465781:+|nuORF'] 93011 10946 RRREGLSKFN True PC9_epitope_Rep1 1261.7003513125696 1261.69870490379 46.992 3 -3.742580224972099 0.46426317782171556 1.0 ['nc|ENSG00000177302|Q13472-2|TOP3A', 'ENSG00000177302|ENST00000321105|TOP3A', 'ENST00000580713.1_1_17:18212093-18218098:-|nuORF', 'ENST00000582230.5_1_17:18210861-18218098:-|nuORF', 'ENST00000583328.5_1_17:18210081-18218056:-|nuORF'] 92078 9741 RPSQDCHNLP True PC9_epitope_Rep2 1165.5298403998102 1165.52874993586 42.809 2 -3.7490186226909614 0.46430036283325443 1.0 ['ENST00000527969.1_1_11:65637983-65638631:-|nuORF', 'ENSG00000172638|ENST00000307998|EFEMP2'] 64693 7924 LRLFQYNYPYW True NCI_RA007_Epitope_Rep2 1561.77178491733 1561.7706899358602 35.454 2 -3.767231633379768 0.46436421382523374 1.0 ['ENSG00000108576|ENST00000650711|SLC6A4', 'nc|ENSG00000108576|P31645-2|SLC6A4'] 61084 17029 LLAYFILM True NCI_RA007_Epitope_Rep4 982.5561617354599 982.55506993586 73.787 2 -3.770497835660037 0.46436421382523374 1.0 ['chr3:119173638-119187775|271|26.94|0.21|7.04|+|ENST00000497685|UPK1B,UPK1B', 'chr3:119173638-119186679|214|13.77|0.12|6.86|+|ENST00000494855|UPK1B,UPK1B', 'chr3:119190319-119191006|253|13.0|0.2|6.03|+|ENST00000460625|UPK1B,UPK1B', 'ENSG00000114638|ENST00000264234|UPK1B', 'chr3:119176109-119186714|293|40.76|0.71|5.84|+|ENST00000479520|UPK1B,UPK1B', 'chr3:119173638-119175998|287|45.64|0.61|6.22|+|ENST00000479520|UPK1B,UPK1B'] 20817 8624 EQNWRQHREAY True PC9_epitope_Rep5 1515.69672248411 1515.69508490379 38.115 3 -3.778914989280056 0.4643908800269224 1.0 ['ENSG00000140403|ENST00000394852|DNAJA4', 'nc|ENSG00000140403|Q8WW22-2|DNAJA4', 'nc|ENSG00000140403|Q8WW22-3|DNAJA4', 'ENST00000480425.1_1_15:78572367-78572799:+|nuORF'] 127159 5400 VQELAATHH True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 26.166 2 -3.7823394899263647 0.46439651274069554 1.0 ['SPTA1|p.A1704T|1|0.34|ENSG00000163554|chr1:158638112-158638112|C/T|missense_variant'] 36603 15631 GVLKKVIRHKR True PC9_epitope_Rep4 1332.8830071321597 1332.88135490379 68.048 3 -3.7942333230691907 0.46441266168892625 1.0 ['nc|ENSG00000041982|P24821-4|TNC', 'ENSG00000041982|ENST00000350763|TNC', 'nc|ENSG00000041982|P24821-5|TNC', 'nc|ENSG00000041982|P24821-2|TNC', 'nc|ENSG00000041982|P24821-3|TNC', 'nc|ENSG00000041982|P24821-6|TNC', 'TNC|p.N1455Sfs*82|1|0.28|ENSG00000041982|chr9:115057370-115057371|-/AA|frameshift_variant'] 122045 23883 VGQRLRSPRRA True PC9_epitope_Rep5 1294.7694339318998 1294.76832993586 96.847 2 -3.809683670725769 0.4644141586219951 1.0 ['ENST00000492837.1_1_7:102004828-102016337:+|nuORF'] 72978 5042 NCTFFFFF True PC9_epitope_Rep2 1071.4524249429098 1071.45132993586 24.763 2 -3.810425496884299 0.4644141586219951 1.0 ['ENST00000478856.5_1_3:100067842-100068019:+|nuORF'] 53066 22879 KSCCLLLIAKN True PC9_epitope_Rep2 1204.6671858197599 1204.66608993586 93.497 2 -3.81148493578333 0.4644141586219951 1.0 ['ENST00000504793.1_1_4:169337857-169343051:-|nuORF'] 94274 18902 RWSHRYDEWIY True H1975_Epitope_Rep3 1609.7426100473697 1609.7415099358602 79.276 2 -3.8122962545805197 0.4644141586219951 1.0 ['ENSG00000129292|ENST00000395386|PHF20L1', 'PHF20L1|p.V175Sfs*48|1|0.38|ENSG00000129292|chr8:132803834-132803834|G/-|frameshift_variant', 'nc|ENSG00000129292|A8MW92-2|PHF20L1', 'ENST00000361997.9_1_8:133790074-133829825:+|nuORF', 'ENST00000395383.5_1_8:133790074-133836319:+|nuORF', 'nc|ENSG00000129292|A8MW92-4|PHF20L1'] 64692 8252 LRLFQYNYPYW True NCI_RA007_Epitope_Rep1 1561.77178491733 1561.7706899358602 36.097 2 -3.833080141957792 0.4644359384201228 1.0 ['ENSG00000108576|ENST00000650711|SLC6A4', 'nc|ENSG00000108576|P31645-2|SLC6A4'] 133878 20489 WMQRMMRSRRR True PC9_epitope_Rep4 1592.8074934000797 1592.8063899358601 86.96 2 -3.8357010714130926 0.4644359384201228 1.0 ['ENST00000399325.2_1_X:133406709-133407198:+|nuORF'] 15828 21418 EDKKVRVQ True PC9_epitope_Rep1 1000.5665431783598 1000.56544993586 87.221 2 -3.8521115491987636 0.464462601343891 1.0 ['CDK14|p.F103Lfs*39|1|0.23|ENSG00000058091|chr7:90726750-90726750|T/-|frameshift_variant', 'nc|ENSG00000058091|O94921-3|CDK14', 'nc|ENSG00000058091|O94921-2|CDK14', 'ENSG00000058091|ENST00000380050|CDK14'] 96373 8031 SEGRGGRL True PC9_epitope_Rep4 830.43586336198 830.43476993586 38.342 2 -3.857568705859979 0.4644682327704053 1.0 ['ENST00000300051.8_2_16:75149460-75150658:-|nuORF'] 89306 20450 RELTQNPLKKI True H1975_Epitope_Rep1 1338.7983340183398 1338.79669490379 85.056 3 -3.8774546225660163 0.46454258675078863 1.0 ['ENSG00000114268|ENST00000232375|PFKFB4', 'ENST00000490115.5_1_3:48586091-48594264:-|nuORF', 'nc|ENSG00000114268|Q16877-2|PFKFB4'] 10171 22434 CCCPSSGSCC True PC9_epitope_Rep2 948.22680138948 948.22570993586 91.783 2 -3.8947144646981933 0.46454258675078863 1.0 ['LCE2C|p.G49C|1|0.16|ENSG00000187180|chr1:152676160-152676160|G/T|missense_variant'] 110706 3445 TKATCDQSGCC True PC9_epitope_Rep5 1115.4045654273098 1115.4034699358601 18.329 2 -3.916296608845481 0.4645797625682169 1.0 ['MGAM|p.R115S|1|0.19|ENSG00000257335|chr7:142019214-142019214|C/A|missense_variant'] 84450 12104 QGKLAAAK True PC9_epitope_Rep5 785.47593726881 785.47484993586 51.549 2 -3.9233572040089477 0.46458613728129206 1.0 ['ENSG00000184206|ENST00000510439|GOLGA6L4', 'ENSG00000197978|ENST00000618348|GOLGA6L9', 'ENSG00000278662|ENST00000610657|GOLGA6L10', 'ENSG00000213047|ENST00000620048|DENND1B', 'DENND1B|p.E705Kfs*3|1|0.3|ENSG00000213047|chr1:197510675-197510675|C/-|frameshift_variant'] 66662 5752 LSSSSHGVP True PC9_epitope_Rep5 869.42429561877 869.42318993586 27.119 2 -3.9311512392374532 0.46458613728129206 1.0 ['ENST00000300527.8_1_21:47552514-47552718:+|nuORF'] 128810 24178 VSRRAAQL True PC9_epitope_Rep2 899.5300980999898 899.52900993586 98.526 2 -3.9312648007054367 0.46458613728129206 1.0 ['ENSG00000156510|ENST00000354624|HKDC1', 'nc|ENSG00000156515|P19367-4|HK1', 'nc|ENSG00000156515|P19367-2|HK1', 'ENSG00000156515|ENST00000359426|HK1', 'nc|ENSG00000156515|P19367-3|HK1'] 108324 6891 TEDNKCRTL True PC9_epitope_Rep5 1078.5077079729 1078.50660993586 31.475 2 -3.9549363331599072 0.46465071287378557 1.0 ['NFYC|p.R93C|1|0.41|ENSG00000066136|chr1:40749672-40749672|C/T|missense_variant'] 69030 5534 LVHSDASGQ True PC9_epitope_Rep5 912.4301092752 912.42900993586 26.294 2 -3.9602481761396646 0.46465071287378557 1.0 ['SIRPB2|p.P27H|1|0.28|ENSG00000196209|chr20:1491280-1491280|G/T|missense_variant'] 39285 18158 HLPRGEGRF True PC9_epitope_Rep2 1067.5624608574299 1067.56136993586 75.149 2 -3.9760750470901622 0.46465071287378557 1.0 ['ENSG00000159592|ENST00000355105|GPBP1L1'] 133640 24188 WKKRKRKAK True PC9_epitope_Rep5 1227.8040285354698 1227.80239490379 98.031 3 -3.981310110853552 0.46465071287378557 1.0 ['ENST00000597544.5_1_19:53683054-53696636:-|nuORF', 'ENST00000596373.1_1_19:53683054-53693528:-|nuORF'] 52436 23565 KPGRKDTIT True PC9_epitope_Rep5 1014.5821932424999 1014.58108993586 95.628 2 -3.9885662741151555 0.46465782805715306 1.0 ['ENSG00000188316|ENST00000341276|ENO4'] 120641 7200 VGAKPKIE True PC9_epitope_Rep5 840.5069030439199 840.50580993586 32.661 2 -3.99362438936134 0.46465782805715306 1.0 ['nc|ENSG00000108883|Q15029-2|EFTUD2', 'nc|ENSG00000108883|Q15029-3|EFTUD2', 'ENSG00000108883|ENST00000426333|EFTUD2', 'ENST00000590367.5_1_17:42931463-42950195:-|nuORF'] 81835 14021 PSGSNCHL True PC9_epitope_Rep5 813.34393712309 813.34282993586 58.949 2 -3.99700822375231 0.46465782805715306 1.0 ['ENST00000374943.8_2_6:32634292-32634454:-|nuORF'] 86720 6437 QRKAAGPV True PC9_epitope_Rep3 825.4820852784098 825.48098993586 29.785 2 -3.998961968292414 0.46465782805715306 1.0 ['ENST00000464148.2_1_1:228296563-228296986:-|nuORF'] 63155 11822 LNRSSKDVP True PC9_epitope_Rep2 1014.54580773378 1014.5447099358599 50.803 2 -4.000758131911354 0.46465782805715306 1.0 ['ENSG00000177628|ENST00000368373|GBA1', 'nc|ENSG00000177628|P04062-2|GBA1', 'nc|ENSG00000177628|P04062-5|GBA1', 'nc|ENSG00000177628|P04062-4|GBA1'] 107801 8403 TAPEKRSL True PC9_epitope_Rep2 900.5028802926399 900.50178993586 37.693 2 -4.00414234062552 0.46465857120328025 1.0 ['POU4F3|p.A282T|2|0.18|ENSG00000091010|chr5:146340271-146340271|G/A|missense_variant'] 90046 22383 RGGPVRVA True PC9_epitope_Rep5 810.4824196315799 810.48132993586 91.108 2 -4.006954105905683 0.46465857120328025 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 38438 10106 HGTREKTL True PC9_epitope_Rep3 940.5090283022399 940.50792993586 43.825 2 -4.0077162823886585 0.4646641995037638 1.0 ['ENST00000520580.5_1_5:65460613-65466462:+|nuORF'] 42796 17819 IFIFSAFIQVF True NCI_RA007_Epitope_Rep5 1330.7325458743 1330.7314499358602 75.336 2 -4.019788712751913 0.46469382391590014 1.0 ['nc|ENSG00000213439|P0C628|OR5AC1'] 55254 10839 LAQKPNKP True PC9_epitope_Rep5 894.5287011176599 894.52760993586 46.679 2 -4.020975090921245 0.46469382391590014 1.0 ['nc|ENSG00000258436|Q7Z5J4-2|RAI1', 'ENSG00000108557|ENST00000353383|RAI1', 'nc|ENSG00000258436|Q7Z5J4-3|RAI1'] 117291 17851 VAADRRSW True PC9_epitope_Rep5 959.49371259127 959.49260993586 73.683 2 -4.045604393443112 0.46469382391590014 1.0 ['ENSG00000152683|ENST00000282587|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-2|SLC30A6', 'nc|ENSG00000152683|Q6NXT4-3|SLC30A6'] 86423 21410 QQQKKKLS True PC9_epitope_Rep6 986.5872786229398 986.58618993586 95.227 2 -4.047590877549089 0.46469382391590014 1.0 ['ENSG00000214814|ENST00000522917|FER1L6', 'FER1L6|p.L1277Afs*4|1|0.37|ENSG00000214814|chr8:124069468-124069469|TC/-|frameshift_variant'] 91468 2551 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 14.116 3 -4.04948076177118 0.46469382391590014 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 136127 10195 YGGEAEER True PC9_epitope_Rep3 909.38282472961 909.38172993586 44.168 2 -4.053130728339539 0.46469382391590014 1.0 ['ENSG00000174429|ENST00000311955|ABRA'] 29908 11536 FWFLMYPFRFH True NCI_RA007_Epitope_Rep2 1589.76419743909 1589.76310993586 49.464 2 -4.056886125316249 0.46469382391590014 1.0 ['GPR174|p.R300Efs*21|1|0.36|ENSG00000147138|chrX:79171904-79171904|C/-|frameshift_variant', 'ENSG00000147138|ENST00000645147|GPR174'] 3846 7291 AGYVEGGK True PC9_epitope_Rep2 779.3813681776298 779.38026993586 33.431 2 -4.05802698793526 0.46469382391590014 1.0 ['nc|ENSG00000052344|Q16651-2|PRSS8', 'ENSG00000052344|ENST00000317508|PRSS8'] 95527 23424 SAQLLPVLLLH True PC9_epitope_Rep6 1202.7386938839 1202.7375899358601 103.21 2 -4.060419827907531 0.46469382391590014 1.0 ['nc|ENSG00000164818|Q86Y56-2|DNAAF5', 'ENSG00000164818|ENST00000297440|DNAAF5'] 125098 25561 VLPGKKKKKT True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 103.62 3 -4.0756713926036126 0.4647261029991485 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 138179 24585 YQPSRGAA True PC9_epitope_Rep2 848.4140652882398 848.41296993586 100.19 2 -4.080246249702395 0.4647261029991485 1.0 ['nc|nan|Q5SQH8|C6orf136', 'ENSG00000204564|ENST00000651131|C6orf136', 'nc|nan|Q5SQH8-3|C6orf136'] 60034 17333 LHRQQRQRKFL True PC9_epitope_Rep2 1508.8800470100398 1508.8789499358602 71.926 2 -4.080556675174943 0.46472684460048985 1.0 ['ENSG00000159450|ENST00000614923|TCHH'] 124558 25032 VLGNKPAT True PC9_epitope_Rep5 798.4599528515 798.45940496793 101.42 1 -4.0876820381792935 0.46472684460048985 1.0 ['ENSG00000179846|ENST00000686631|NKPD1', 'nc|ENSG00000179846|Q17RQ9|NKPD1'] 90045 22077 RGGPVRVA True PC9_epitope_Rep5 810.4824196315799 810.48132993586 89.949 2 -4.1071268156726495 0.46474298328602964 1.0 ['ENST00000496467.5_1_9:102861593-102977700:+|nuORF', 'ENST00000466647.5_1_9:102861593-102977308:+|nuORF'] 121234 11393 VGGQPHPP True PC9_epitope_Rep2 787.3976869481099 787.39658993586 49.146 2 -4.11845611352655 0.46474860981173327 1.0 ['ENST00000478619.1_1_3:50374443-50374560:-|nuORF'] 131753 21305 VYADGIFDLF True NCI_RA007_Epitope_Rep4 1158.55972646242 1158.55917496793 92.357 1 -4.124736448796992 0.46476474792919314 1.0 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B'] 91469 2729 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 15.028 3 -4.134997371810892 0.46477674066599395 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 122884 21951 VGVPTRAR True PC9_epitope_Rep5 854.5086343794198 854.50808496793 89.474 1 -4.137405051806978 0.46477674066599395 1.0 ['ENST00000436072.6_1_7:37955747-37956332:-|nuORF'] 76399 20883 NSLKQRAP True PC9_epitope_Rep5 912.5141136826799 912.5130099358599 85.379 2 -4.141162566118128 0.46477674066599395 1.0 ['nc|ENSG00000105221|P31751-2|AKT2', 'ENST00000391844.8_1_19:40739781-40791100:-|nuORF', 'ENSG00000105221|ENST00000392038|AKT2', 'ENST00000537834.5_1_19:40745726-40771198:-|nuORF', 'ENST00000487537.2_1_19:40747718-40761168:-|nuORF'] 7740 13723 ASSSGKPGPTV True PC9_epitope_Rep2 986.5032742154599 986.50216993586 58.076 2 -4.1435131513368795 0.46477674066599395 1.0 ['ENSG00000244462|ENST00000374114|RBM12'] 78221 18144 PAPSPAAADK True PC9_epitope_Rep5 923.4712458111899 923.47014993586 74.8 2 -4.164894551057921 0.4647909528514073 1.0 ['nc|ENSG00000055609|Q8NEZ4-2|KMT2C', 'nc|ENSG00000055609|Q8NEZ4-3|KMT2C', 'ENSG00000055609|ENST00000262189|KMT2C', 'KMT2C|p.S2494Efs*31|2|0.38|ENSG00000055609|chr7:152177974-152177975|-/T|frameshift_variant', 'KMT2C|p.S2108Ffs*45|1|0.33|ENSG00000055609|chr7:152181536-152181537|AG/-|frameshift_variant', 'KMT2C|p.Q726Rfs*4|1|0.29|ENSG00000055609|chr7:152248254-152248258|TTCTG/-|frameshift_variant', 'KMT2C|p.V996Wfs*35|1|0.15|ENSG00000055609|chr7:152224608-152224608|T/-|frameshift_variant'] 122548 5938 VGTAGEVR True PC9_epitope_Rep5 787.41881631551 787.41770993586 27.836 2 -4.183898966822915 0.4647909528514073 1.0 ['ENSG00000079432|ENST00000681038|CIC'] 87020 18674 QSCRRNVKYR True PC9_epitope_Rep5 1308.68332134944 1308.68167490379 76.85 3 -4.196374647100571 0.4647909528514073 1.0 ['KCNQ5-AMPH|1|fusion', 'nc|ENSG00000185760|Q9NR82-4|KCNQ5', 'nc|ENSG00000185760|Q9NR82-5|KCNQ5', 'nc|ENSG00000185760|Q9NR82-2|KCNQ5', 'ENSG00000185760|ENST00000370398|KCNQ5', 'nc|ENSG00000185760|Q9NR82-7|KCNQ5', 'nc|ENSG00000185760|Q9NR82-3|KCNQ5', 'nc|ENSG00000185760|Q9NR82-6|KCNQ5'] 100718 13977 SLRGRRTWVR True PC9_epitope_Rep4 1285.7479702113299 1285.74686993586 61.668 2 -4.204615285295302 0.4647909528514073 1.0 ['ENST00000313146.10_1_1:156697789-156698104:-|nuORF'] 30861 22452 GARAGTGREL True PC9_epitope_Rep2 986.5257409955399 986.52464993586 91.851 2 -4.208735742502235 0.4647909528514073 1.0 ['nc|ENSG00000170291|Q8TE02-1|ELP5'] 116062 10750 TVRVDRPV True PC9_epitope_Rep2 940.5454138109599 940.54430993586 46.669 2 -4.233843209090751 0.4647909528514073 1.0 ['MED12|p.R1713P|2|0.12|ENSG00000184634|chrX:71136393-71136393|G/C|missense_variant'] 66636 9590 LSSRCPQHLHP True PC9_epitope_Rep2 1273.6349741746901 1273.63333490379 42.232 3 -4.241997310367932 0.4647909528514073 1.0 ['ENST00000373325.6_1_20:37667290-37667452:+|nuORF'] 15321 7535 EAKGRAEAL True PC9_epitope_Rep2 943.5086939490699 943.50758993586 34.35 2 -4.25690472109794 0.4647909528514073 1.0 ['nc|ENSG00000002079|Q9H6N6|MYH16'] 125101 26923 VLPGKKKKKT True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 110.01 3 -4.26210836857734 0.4647909528514073 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 139764 17817 YVAKHTRI True PC9_epitope_Rep2 986.5661492555399 986.56504993586 73.827 2 -4.262990675104042 0.4647909528514073 1.0 ['ENSG00000198482|ENST00000359798|ZNF808', 'nc|ENSG00000198482|Q8N4W9-2|ZNF808', 'ZNF808|p.R691H|1|0.16|ENSG00000198482|chr19:52554988-52554988|G/A|missense_variant'] 40541 20133 HSRFLQGHEKT True PC9_epitope_Rep1 1338.6792815148196 1338.67818993586 82.271 2 -4.277200964472272 0.4648022028839282 1.0 ['ENSG00000196466|ENST00000430385|ZNF799', 'nc|ENSG00000196466|Q96GE5-2|ZNF799', 'ENSG00000180855|ENST00000301547|ZNF443'] 75389 7193 NQEKSQSL True PC9_epitope_Rep5 932.45632402304 932.45522993586 32.633 2 -4.278460678996974 0.4648022028839282 1.0 ['ENST00000258341.4_1_1:183112029-183112179:+|nuORF'] 125100 26359 VLPGKKKKKT True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 107.25 3 -4.3417304622334925 0.4649129260423126 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 56111 19987 LDLRGRHHEA True PC9_epitope_Rep1 1202.62685201914 1202.62574993586 81.705 2 -4.3512519582227 0.46491854965843404 1.0 ['ENSG00000132182|ENST00000254508|NUP210'] 49280 24051 KHIARLSQKQ True PC9_epitope_Rep1 1207.71493874755 1207.71328490379 97.322 3 -4.361876073966013 0.4649200243815289 1.0 ['nc|ENSG00000139144|O75747-2|PIK3C2G', 'ENSG00000139144|ENST00000538779|PIK3C2G', 'PIK3C2G|p.K900Rfs*29|1|0.36|ENSG00000139144|chr12:18491461-18491462|AG/-|frameshift_variant', 'PIK3C2G|p.G1094Efs*4|1|0.24|ENSG00000139144|chr12:18505418-18505418|G/-|frameshift_variant'] 53036 7562 KRTRNENIF True PC9_epitope_Rep5 1176.63635407368 1176.63469490379 34.036 3 -4.381099453350698 0.4649200243815289 1.0 ['ENSG00000152463|ENST00000378228|OLAH', 'nc|ENSG00000152463|Q9NV23-2|OLAH'] 133950 5995 WPFVCWWRYWW True NCI_RA007_Epitope_Rep4 1713.7703454486898 1713.7692499358602 29.678 2 -4.396211514147639 0.4649200243815289 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 61916 13505 LLLLLLLL True NCI_RA007_Epitope_Rep5 922.68307650074 922.68196993586 58.631 2 -4.396367512711822 0.4649200243815289 1.0 ['ENST00000418040.5_1_7:134331590-134346220:+|nuORF', 'UCN3|p.P18H|1|0.47|ENSG00000178473|chr10:5373773-5373773|C/A|missense_variant', 'PLBD1|p.N149Ifs*17|1|0.25|ENSG00000121316|chr12:14540881-14540881|C/-|frameshift_variant', 'ENSG00000183971|ENST00000566435|NPW', 'ENST00000522902.1_1_5:156533605-156536090:-|nuORF', 'ENSG00000182685|ENST00000328540|BRICD5', 'ENSG00000117899|ENST00000261758|MESD', 'nc|ENSG00000182685|Q6PL45|BRICD5', 'ENSG00000184709|ENST00000371542|LRRC26', 'FAT1|p.H507Rfs*6|1|0.13|ENSG00000083857|chr4:186708307-186708308|AT/-|frameshift_variant', 'ENSG00000121316|ENST00000240617|PLBD1', 'FAT1|p.N618Tfs*9|1|0.18|ENSG00000083857|chr4:186707975-186707975|T/-|frameshift_variant', 'CON__ENSEMBL:ENSBTAP00000023055', 'ENSG00000182272|ENST00000329962|B4GALNT4', 'ENST00000396904.2_2_7:5097383-5112677:+|nuORF', 'ENST00000393132.2_1_7:134331590-134343135:+|nuORF', 'ENST00000369603.9_1_10:112063289-112064608:-|nuORF', 'ENST00000498308.1_1_7:5111828-5112677:+|nuORF', 'ENSG00000178473|ENST00000380433|UCN3', 'ENST00000344924.7_1_7:134331590-134346213:+|nuORF', 'ENST00000522399.1_1_1:231090115-231114586:-|nuORF', 'ENSG00000070031|ENST00000176195|SCT', 'ENST00000530717.1_1_11:369803-372772:+|nuORF', 'nc|ENSG00000117899|Q14696-2|MESD', 'nc|ENSG00000135077|Q8TDQ0-2|HAVCR2', 'ENST00000367585.1_1_6:143823176-143832783:-|nuORF', 'nc|ENSG00000001036|Q9BTY2-2|FUCA2', 'ENSG00000161921|ENST00000293778|CXCL16', 'ENSG00000137161|ENST00000372836|CNPY3', 'nc|ENSG00000129214|P04278-4|SHBG', 'nc|ENSG00000129214|P04278-3|SHBG', 'nc|ENSG00000204301|Q99466-3|NOTCH4', 'ENST00000467485.5_1_6:26384034-26390495:+|nuORF', 'nc|ENSG00000129214|P04278-5|SHBG', 'ENSG00000129214|ENST00000380450|SHBG', 'nc|ENSG00000131042|Q8N423-4|LILRB2', 'ENSG00000125810|ENST00000246006|CD93', 'ENSG00000109758|ENST00000382774|HGFAC', 'SHBG|p.L175Afs*39|1|0.14|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant', 'ENST00000530312.1_1_11:46142070-46142581:-|nuORF', 'nc|ENSG00000137161|Q9BT09-2|CNPY3', 'ENST00000323180.10_1_11:46105825-46142581:-|nuORF', 'ENST00000532883.5_1_11:46112101-46142581:-|nuORF', 'ENST00000476805.2_1_2:64977750-64977942:-|nuORF', 'ENST00000529734.5_1_11:46105847-46142581:-|nuORF', 'ENST00000462628.5_1_19:55146093-55147330:+|nuORF', 'CD93|p.E121Rfs*79|1|0.71|ENSG00000125810|chr20:23085832-23085832|C/-|frameshift_variant', 'nc|ENSG00000213402|Q14761|PTPRCAP', 'ENSG00000134917|ENST00000257359|ADAMTS8', 'ENSG00000150893|ENST00000280481|FREM2', 'nc|ENSG00000150893|Q5SZK8-2|FREM2', 'ENSG00000054654|ENST00000555002|SYNE2', 'nc|ENSG00000054654|Q8WXH0|SYNE2', 'ENST00000394768.6_2_14:64542710-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-7|SYNE2', 'nc|ENSG00000054654|Q8WXH0-6|SYNE2', 'nc|ENSG00000054654|Q8WXH0-13|SYNE2', 'nc|ENSG00000054654|Q8WXH0-3|SYNE2', 'ENST00000555022.5_2_14:64671104-64692241:+|nuORF', 'ENST00000554805.6_2_14:64676062-64692241:+|nuORF', 'nc|ENSG00000054654|Q8WXH0-4|SYNE2', 'nc|ENSG00000054654|Q8WXH0-10|SYNE2', 'nc|ENSG00000054654|Q8WXH0-5|SYNE2', 'nc|ENSG00000054654|Q8WXH0-12|SYNE2', 'nc|ENSG00000054654|Q8WXH0-11|SYNE2', 'ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant', 'nc|ENSG00000167925|Q8N2G8-2|GHDC', 'nc|ENSG00000167925|Q8N2G8-3|GHDC', 'ENSG00000167925|ENST00000587427|GHDC', 'ENSG00000001036|ENST00000002165|FUCA2', 'ENSG00000167680|ENST00000586582|SEMA6B', 'nc|ENSG00000167680|Q9H3T3-3|SEMA6B', 'PLXNA1|p.P972Lfs*15|1|0.21|ENSG00000114554|chr3:127015217-127015217|G/-|frameshift_variant', 'ENSG00000114554|ENST00000393409|PLXNA1', 'ENST00000395811.9_1_17:17088208-17088493:+|nuORF', 'ENST00000413911.1_1_2:191745560-191746172:-|nuORF', 'ENSG00000173714|ENST00000311378|WFIKKN2', 'ENSG00000088812|ENST00000262919|ATRN', 'nc|ENSG00000088812|O75882-2|ATRN', 'ENSG00000215644|ENST00000400723|GCGR', 'ENSG00000182578|ENST00000675795|CSF1R', 'ENSG00000115155|ENST00000272371|OTOF', 'nc|ENSG00000115155|Q9HC10-4|OTOF', 'nc|ENSG00000115155|Q9HC10-3|OTOF', 'nc|ENSG00000104972|Q8NHL6|LILRB1', 'nc|ENSG00000104972|Q8NHL6-4|LILRB1', 'nc|ENSG00000104972|Q8NHL6-2|LILRB1', 'nc|ENSG00000104972|Q8NHL6-3|LILRB1', 'ENSG00000104972|ENST00000324602|LILRB1', 'nc|ENSG00000131042|Q8N423-3|LILRB2', 'ENSG00000131042|ENST00000314446|LILRB2', 'nc|ENSG00000131042|Q8N423-1|LILRB2', 'ENSG00000181790|ENST00000517894|ADGRB1', 'ADGRB1|p.T1308Afs*8|1|0.16|ENSG00000181790|chr8:142542155-142542174|GACCCTCAAGAGGGACAAGG/-|frameshift_variant', 'ADGRB1|p.D708Tfs*49|1|0.15|ENSG00000181790|chr8:142481700-142481700|G/-|frameshift_variant', 'ATRN-TNKS2|2|fusion', 'ENSG00000166341|ENST00000299441|DCHS1', 'DCHS1|p.Q1174Rfs*63|1|0.17|ENSG00000166341|chr11:6631771-6631771|G/-|frameshift_variant', 'DCHS1|p.F1264Sfs*16|1|0.25|ENSG00000166341|chr11:6631192-6631192|A/-|frameshift_variant', 'ENSG00000169174|ENST00000302118|PCSK9', 'ENSG00000185033|ENST00000411539|SEMA4B', 'nc|ENSG00000185033|Q9NPR2-2|SEMA4B', 'nc|ENSG00000283654|A0A1B0GTW7-3|CIROP', 'nc|ENSG00000283654|A0A1B0GTW7-2|CIROP', 'ENSG00000283654|ENST00000637218|CIROP', 'FAT1|p.I1069Sfs*3|2|0.11|ENSG00000083857|chr4:186706614-186706622|AGTATCGGA/C|frameshift_variant', 'ENSG00000083857|ENST00000441802|FAT1', 'FAT1|p.Y3981Ffs*2|1|0.57|ENSG00000083857|chr4:186600059-186600059|T/-|frameshift_variant', 'FAT1|p.V3629Cfs*11|1|0.62|ENSG00000083857|chr4:186603642-186603642|T/-|frameshift_variant', 'FAT1|p.V2514*|1|0.19|ENSG00000083857|chr4:186619046-186619046|C/-|frameshift_variant', 'FAT1|p.V2618Sfs*5|1|0.24|ENSG00000083857|chr4:186618734-186618735|-/T|frameshift_variant', 'FAT1|p.D3258Ifs*12|1|0.5|ENSG00000083857|chr4:186611467-186611467|C/-|frameshift_variant', 'FAT1|p.I3328Tfs*47|1|0.17|ENSG00000083857|chr4:186609883-186609886|TTGA/-|frameshift_variant', 'FAT1|p.N3452Tfs*6|1|0.39|ENSG00000083857|chr4:186604552-186604570|CTGAAGCCCACTGGCTTAT/-|frameshift_variant', 'FAT1|p.P1855Hfs*11|1|0.34|ENSG00000083857|chr4:186621022-186621022|G/-|frameshift_variant', 'ADAMTS8|p.R442Pfs*39|1|0.39|ENSG00000134917|chr11:130414774-130414775|-/C|frameshift_variant', 'nc|ENSG00000064601|P10619-2|CTSA', 'ENSG00000064601|ENST00000646241|CTSA', 'nc|ENSG00000083807|Q9Y2P5-2|SLC27A5', 'ENSG00000083807|ENST00000263093|SLC27A5', 'nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2', 'ENSG00000109255|ENST00000264218|NMU', 'ENSG00000109743|ENST00000265016|BST1', 'ENSG00000124508|ENST00000356709|BTN2A2', 'ENST00000482636.1_1_6:26384034-26385742:+|nuORF', 'nc|ENSG00000124508|Q8WVV5-5|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-2|BTN2A2', 'nc|ENSG00000124508|Q8WVV5-4|BTN2A2', 'ENSG00000132518|ENST00000254854|GUCY2D', 'ENSG00000135077|ENST00000307851|HAVCR2', 'ENSG00000141096|ENST00000268793|DPEP3', 'ENSG00000142538|ENST00000270631|PTH2', 'nc|ENSG00000143434|Q9H3T2-2|SEMA6C', 'ENSG00000143434|ENST00000368914|SEMA6C', 'nc|ENSG00000143434|Q9H3T2-3|SEMA6C', 'ENSG00000149451|ENST00000356518|ADAM33', 'nc|ENSG00000149451|Q9BZ11-2|ADAM33', 'nc|ENSG00000155093|Q92932-2|PTPRN2', 'nc|ENSG00000155093|Q92932-4|PTPRN2', 'ENSG00000155093|ENST00000389418|PTPRN2', 'PTPRN2|p.K427Sfs*84|2|0.17|ENSG00000155093|chr7:158133938-158133953|TCAGGGTGCTCGGACT/-|frameshift_variant', 'nc|ENSG00000157193|Q14114-2|LRP8', 'nc|ENSG00000157193|Q14114-4|LRP8', 'nc|ENSG00000157193|Q14114-3|LRP8', 'ENSG00000157193|ENST00000306052|LRP8', 'ENSG00000159189|ENST00000374640|C1QC', 'ENSG00000162337|ENST00000294304|LRP5', 'ENSG00000164897|ENST00000297533|TMUB1', 'ENSG00000165905|ENST00000401752|LARGE2', 'nc|ENSG00000167261|Q9H4A9-2|DPEP2', 'ENSG00000167261|ENST00000393847|DPEP2', 'ENST00000268795.5_1_16:68025981-68027124:-|nuORF', 'nc|ENSG00000167261|Q9H4A9-3|DPEP2', 'nc|ENSG00000168056|Q9NS15-2|LTBP3', 'ENSG00000168056|ENST00000301873|LTBP3', 'ENSG00000172071|ENST00000303236|EIF2AK3', 'EIF2AK3|p.E749Sfs*5|1|0.19|ENSG00000172071|chr2:88575237-88575238|TC/AGA|frameshift_variant', 'ENSG00000184985|ENST00000507866|SORCS2', 'ENSG00000184992|ENST00000341446|BRI3BP', 'ENSG00000185245|ENST00000329125|GP1BA', 'ENSG00000185896|ENST00000332556|LAMP1', 'nc|ENSG00000185896|P11279-2|LAMP1', 'ENSG00000204301|ENST00000375023|NOTCH4', 'ENSG00000204967|ENST00000530339|PCDHA4', 'nc|ENSG00000204967|Q9UN74-2|PCDHA4', 'nc|ENSG00000290691|A6NGW2|STRCP1', 'ENSG00000242866|ENST00000450892|STRC', 'ENSG00000243232|ENST00000289269|PCDHAC2', 'nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2', 'PCDHAC2|p.N617Mfs*8|2|0.15|ENSG00000243232|chr5:140968613-140968613|A/-|frameshift_variant', 'ENSG00000243364|ENST00000368409|EFNA4', 'ENST00000293778.10_2_17:4636851-4637124:-|nuORF', 'ENST00000565192.1_1_6:31022106-31024293:+|nuORF', 'nc|ENSG00000228789|E2RYF7|HCG22', 'HGFAC|p.P30L|1|0.6|ENSG00000109758|chr4:3442090-3442090|C/T|missense_variant', 'nc|ENSG00000124508|Q8WVV5-3|BTN2A2', 'nc|ENSG00000283706|Q9UI38|PRSS50', 'ENST00000536100.1_1_12:133182714-133186967:-|nuORF', 'ENSG00000204583|ENST00000376608|LRCOL1', 'ENSG00000161610|ENST00000293330|HCRT'] 71612 10626 MLLENIILL True NCI_RA007_Epitope_Rep4 1070.64095398858 1070.6398499358602 47.722 2 -4.404101034214124 0.46492564762755506 1.0 ['ENSG00000275591|ENST00000618742|XKR5'] 133602 18711 WIMLILVG True NCI_RA007_Epitope_Rep4 943.5564960886298 943.55538993586 80.95 2 -4.408628153013292 0.46493127075539115 1.0 ['ENST00000489322.5_1_22:24226412-24227033:+|nuORF', 'ENST00000461809.5_1_22:24225898-24227033:+|nuORF', 'nc|ENSG00000133460|Q9BYW1|SLC2A11', 'ENSG00000133460|ENST00000316185|SLC2A11', 'nc|ENSG00000133460|Q9BYW1-4|SLC2A11'] 51921 5264 KKSKYKNRYW True PC9_epitope_Rep5 1399.77245362367 1399.7707949037901 25.264 3 -4.443868451835443 0.4649642707019756 1.0 ['ENST00000479790.2_1_13:22067163-22067286:-|nuORF'] 111910 22598 TLRRYKRHYKL True PC9_epitope_Rep5 1532.90519912872 1532.90410993586 91.921 2 -4.448687363076675 0.4649642707019756 1.0 ['nc|ENSG00000164576|Q9HAJ7-2|SAP30L', 'nc|ENSG00000164576|Q9HAJ7-3|SAP30L', 'ENSG00000164576|ENST00000297109|SAP30L', 'ENST00000520731.1_1_5:153832004-153835585:+|nuORF'] 118281 22693 VDAIKRSSR True PC9_epitope_Rep4 1030.5883412521 1030.5872499358602 95.516 2 -4.450432175501397 0.4649642707019756 1.0 ['nc|ENSG00000141098|Q3B7J2-2|GFOD2', 'ENST00000602522.1_1_16:67709060-67709966:-|nuORF', 'ENSG00000141098|ENST00000268797|GFOD2'] 81153 21466 PPKRGGPC True PC9_epitope_Rep2 810.4170424936998 810.41649496793 88.043 1 -4.453076583130285 0.4649642707019756 1.0 ['ENST00000598782.1_1_19:4785174-4785513:-|nuORF'] 42392 11631 IENLRQQAHK True PC9_epitope_Rep5 1235.67346785839 1235.6723699358602 49.733 2 -4.459105649719524 0.4649804016351236 1.0 ['ENSG00000171951|ENST00000305409|SCG2'] 93394 23306 RRWRKLYCA True PC9_epitope_Rep2 1250.6818647974599 1250.68076993586 95.125 2 -4.477606578245414 0.46498119866394977 1.0 ['ENSG00000163558|ENST00000295797|PRKCI'] 92989 14575 RRQSGAQYG True PC9_epitope_Rep1 1021.5053399041299 1021.50424993586 60.886 2 -4.4916222100305205 0.46498119866394977 1.0 ['ENSG00000100380|ENST00000216218|ST13'] 49065 25207 KFRARSLK True PC9_epitope_Rep2 1004.6243328379999 1004.62322993586 102.63 2 -4.493598540870034 0.46498119866394977 1.0 ['nc|ENSG00000124721|Q96JB1-2|DNAH8', 'nc|ENSG00000124721|Q96JB1|DNAH8', 'ENSG00000124721|ENST00000327475|DNAH8'] 134724 9849 WWRYWWHYPIC True H1975_Epitope_Rep3 1694.76050904098 1694.75940993586 42.914 2 -4.503594318656744 0.46498119866394977 1.0 ['ENST00000410111.7_1_2:86406577-86422494:-|nuORF'] 73599 23099 NGEQIIRRR True PC9_epitope_Rep1 1140.64758746372 1140.64648993586 93.652 2 -4.510199940268071 0.46498119866394977 1.0 ['nc|ENSG00000104447|Q9UHF7|TRPS1', 'nc|ENSG00000104447|Q9UHF7-3|TRPS1', 'ENSG00000104447|ENST00000395715|TRPS1'] 89603 24529 RESQTSYG True PC9_epitope_Rep5 926.4093738306199 926.40826993586 99.449 2 -4.52051927928204 0.46498119866394977 1.0 ['ENST00000454077.6_1_17:42273416-42274359:-|nuORF'] 61809 18450 LLKRRNVP True PC9_epitope_Rep2 994.6399829021399 994.63888993586 76.299 2 -4.531180242547428 0.46498119866394977 1.0 ['ENSG00000186432|ENST00000334256|KPNA4', 'KPNA4|p.E54*|1|0.21|ENSG00000186432|chr3:160535852-160535853|-/A|frameshift_variant'] 53333 23391 KTPKQRLREL True PC9_epitope_Rep5 1267.77245362367 1267.7713499358601 94.958 2 -4.533100653803534 0.46498119866394977 1.0 ['ENSG00000088882|ENST00000380605|CPXM1'] 137036 25009 YKRSAALS True PC9_epitope_Rep2 894.4923156089399 894.49120993586 101.87 2 -4.533236353865304 0.46498119866394977 1.0 ['ENSG00000054793|ENST00000338821|ATP9A', 'nc|ENSG00000054793|O75110-2|ATP9A'] 42832 9534 IFLGLLDFFMP True NCI_RA007_Epitope_Rep5 1311.6937178374299 1311.6926299358602 43.31 2 -4.534968963450504 0.46498119866394977 1.0 ['ENSG00000175820|ENST00000322527|CCDC168'] 30956 19441 GASRGQGP True PC9_epitope_Rep3 728.3565504121199 728.3560049679301 80.006 1 -4.543677952414328 0.46498119866394977 1.0 ['nc|ENSG00000203993|Q9H2J1|ARRDC1-AS1', 'ENST00000371417.3_1_9:140510123-140512388:-|nuORF'] 30065 4797 FYLLSFFYYLY True NCI_RA007_Epitope_Rep5 1537.75334088853 1537.7516849037902 25.136 3 -4.546704657182328 0.46498119866394977 1.0 ['RB1-CNIH3|1|fusion', 'ENSG00000143786|ENST00000272133|CNIH3', 'ENST00000528063.5_1_11:66049809-66051065:+|nuORF', 'ENST00000531936.1_1_11:66050146-66051065:+|nuORF', 'ENSG00000174871|ENST00000311445|CNIH2'] 83788 12981 QEEKERVL True PC9_epitope_Rep5 1029.5454733806098 1029.54436993586 54.94 2 -4.549516212015198 0.46498119866394977 1.0 ['ENSG00000145911|ENST00000274605|N4BP3'] 46845 5199 IVFFYFSEFL True NCI_RA007_Epitope_Rep5 1310.6587122276999 1310.6570549037901 26.695 3 -4.549871570386456 0.46498119866394977 1.0 ['SV2A|p.S278F|1|0.13|ENSG00000159164|chr1:149910948-149910948|G/A|missense_variant'] 60381 25329 LIIIKDLLLLI True NCI_RA007_Epitope_Rep3 1278.8890465156999 1278.8874149037902 109.46 3 -4.568790957350092 0.46498119866394977 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 10358 19080 CIRRSLSR True PC9_epitope_Rep1 989.55526730201 989.55416993586 78.181 2 -4.572027022597842 0.46498119866394977 1.0 ['ENST00000335044.6_2_3:47324147-47324234:-|nuORF'] 58323 7684 LETRCARSV True PC9_epitope_Rep5 1033.53386315109 1033.5327699358602 34.501 2 -4.577393974845608 0.46498119866394977 1.0 ['ENST00000344413.5_1_4:72897830-73003834:+|nuORF'] 60380 24785 LIIIKDLLLLI True NCI_RA007_Epitope_Rep3 1278.8890465156999 1278.8874149037902 107.17 3 -4.578725225748694 0.46498119866394977 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 78018 24391 PALLVLLFC True PC9_epitope_Rep2 987.5827108364699 987.58160993586 99.387 2 -4.579174631006619 0.46498119866394977 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.G241Efs*36|1|0.52|ENSG00000126259|chr19:35860343-35860343|G/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 60379 24690 LIIIKDLLLLI True NCI_RA007_Epitope_Rep3 1278.8890465156999 1278.8874149037902 106.77 3 -4.580460469137096 0.46498119866394977 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 38982 23317 HKALRLLHRC True PC9_epitope_Rep5 1245.72406396261 1245.72241490379 94.668 3 -4.581068202700993 0.46498119866394977 1.0 ['DNHD1|p.L4510Rfs*66|1|0.11|ENSG00000179532|chr11:6571040-6571041|-/G|frameshift_variant', 'ENSG00000179532|ENST00000254579|DNHD1', 'nc|ENSG00000179532|Q96M86-4|DNHD1', 'nc|ENSG00000179532|Q96M86-5|DNHD1'] 128232 18432 VRVRGSGV True PC9_epitope_Rep5 828.4929843152798 828.49188993586 75.919 2 -4.631526210217314 0.46498119866394977 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 88744 19076 RDENYQKV True PC9_epitope_Rep5 1050.50942222506 1050.50832993586 78.405 2 -4.636566165345947 0.46498119866394977 1.0 ['nc|ENSG00000144935|P48995-2|TRPC1', 'ENSG00000144935|ENST00000476941|TRPC1'] 12429 8076 DKKGCHCVI True PC9_epitope_Rep2 1001.4786567740899 1001.47754993586 36.423 2 -4.638665515563596 0.46498119866394977 1.0 ['ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2', 'nc|ENSG00000133818|P62070-3|RRAS2', 'nc|ENSG00000133818|P62070-2|RRAS2'] 36260 10279 GVGHRDARW True PC9_epitope_Rep4 1052.5264097018799 1052.5253099358602 47.225 2 -4.651867663599869 0.46498119866394977 1.0 ['ENST00000587840.5_1_19:10790574-10791040:+|nuORF'] 71501 25333 MKMKKINKDR True PC9_epitope_Rep2 1290.72643203138 1290.7253299358601 103.12 2 -4.659180806445933 0.46498119866394977 1.0 ['ENST00000497089.1_1_7:27203224-27209021:-|nuORF', 'ENSG00000078399|ENST00000343483|HOXA9'] 129722 23255 VTKARLTDK True PC9_epitope_Rep3 1030.61349337078 1030.6123899358602 94.727 2 -4.663650259588301 0.46498119866394977 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 77768 7991 PAATSPSRAAP True PC9_epitope_Rep2 1024.5301576696397 1024.5290699358602 36.1 2 -4.671814885943811 0.46498119866394977 1.0 ['ENST00000546324.1_1_11:73019312-73019516:-|nuORF'] 20492 6400 EPTLRSRQDRH True PC9_epitope_Rep5 1393.71745792869 1393.71580490379 29.594 3 -4.678028148116352 0.46498119866394977 1.0 ['ENSG00000185634|ENST00000332408|SHC4'] 8283 9212 ATKPEINK True PC9_epitope_Rep5 899.5076313199099 899.50652993586 40.38 2 -4.682387069925637 0.46498119866394977 1.0 ['ENSG00000133863|ENST00000643185|TEX15', 'TEX15|p.E2107Kfs*21|1|0.57|ENSG00000133863|chr8:30842699-30842699|C/-|frameshift_variant', 'nc|ENSG00000133863|Q9BXT5|TEX15'] 117600 12893 VAGSACPR True PC9_epitope_Rep5 759.36975794811 759.36866993586 54.603 2 -4.6831927946446665 0.46498119866394977 1.0 ['nc|ENSG00000130822|Q6P2M8-5|PNCK'] 115893 11620 TVPEHSATG True PC9_epitope_Rep5 897.4192102383299 897.41810993586 49.692 2 -4.6892148914099065 0.46498119866394977 1.0 ['ENSG00000074276|ENST00000261944|CDHR2', 'CDHR2|p.T807Hfs*14|2|0.22|ENSG00000074276|chr5:176584693-176584694|-/C|frameshift_variant'] 46063 21200 ISWWRRRTQKR True PC9_epitope_Rep5 1571.8909460469097 1571.88931490379 86.593 3 -4.697177089686761 0.46498119866394977 1.0 ['nc|ENSG00000263639|P08118-2|MSMB'] 129656 6941 VTHTSNGPYKG True PC9_epitope_Rep5 1159.56218607391 1159.56055490379 31.667 3 -4.6983479869072395 0.46498119866394977 1.0 ['ENSG00000277462|ENST00000366503|ZNF670'] 68394 5738 LTSTNPKA True PC9_epitope_Rep2 830.4497820906199 830.44868993586 27.462 2 -4.706112030136482 0.46498119866394977 1.0 ['nc|ENSG00000163125|Q5VT52-5|RPRD2', 'ENST00000492220.1_1_1:150381497-150445807:+|nuORF', 'nc|ENSG00000163125|Q5VT52-3|RPRD2'] 90504 23987 RKAPLHSP True PC9_epitope_Rep1 904.52428444356 904.52318993586 97.072 2 -4.706447897276247 0.46498119866394977 1.0 ['nc|ENSG00000058668|P23634-5|ATP2B4', 'nc|ENSG00000058668|P23634-4|ATP2B4', 'nc|ENSG00000058668|P23634-3|ATP2B4', 'nc|ENSG00000058668|P23634-2|ATP2B4', 'nc|ENSG00000058668|P23634-7|ATP2B4', 'ENSG00000058668|ENST00000357681|ATP2B4', 'nc|ENSG00000058668|P23634-8|ATP2B4', 'nc|ENSG00000058668|P23634|ATP2B4'] 89086 12870 REERRWCWIWI True H1975_Epitope_Rep3 1631.8143355189898 1631.8132299358601 54.728 2 -4.708340608967851 0.46498119866394977 1.0 ['ENST00000482384.1_1_1:109756594-109756711:+|nuORF'] 91467 2490 RNRLMRDMAQ True PC9_epitope_Rep5 1289.6444933125701 1289.6428349037901 13.778 3 -4.72311341715164 0.46498119866394977 1.0 ['ENSG00000198952|ENST00000361813|SMG5'] 126462 23297 VPLSRAGR True PC9_epitope_Rep2 854.50863437942 854.50808496793 95.096 1 -4.726003921092182 0.46498119866394977 1.0 ['ENST00000007264.6_1_16:837573-837639:-|nuORF'] 53610 19841 KVWLSVLFIF True NCI_RA007_Epitope_Rep5 1250.7427166351797 1250.7416099358602 83.229 2 -4.729471051446842 0.46498119866394977 1.0 ['ENSG00000152661|ENST00000282561|GJA1'] 82940 20597 PWNFPFRRSYW True H1975_Epitope_Rep3 1554.75205253226 1554.75094993586 86.083 2 -4.7488173828202065 0.46498119866394977 1.0 ['ENSG00000064687|ENST00000263094|ABCA7', 'nc|ENSG00000064687|Q8IZY2-2|ABCA7'] 89085 12867 REERRWCWIWI True H1975_Epitope_Rep1 1631.8143355189898 1631.8132299358601 54.562 2 -4.749592368491667 0.46498119866394977 1.0 ['ENST00000482384.1_1_1:109756594-109756711:+|nuORF'] 49297 22263 KHNPLQCN True PC9_epitope_Rep1 952.4548845544001 952.45378993586 90.451 2 -4.7508063898512685 0.46498119866394977 1.0 ['ENST00000374092.8_1_20:34256969-34257164:-|nuORF'] 47954 9460 KAAQVTAG True PC9_epitope_Rep5 744.4130026590799 744.4124549679301 41.343 1 -4.757691395375897 0.46498119866394977 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 107857 23932 TARRKVRLEP True PC9_epitope_Rep3 1224.7414878485597 1224.74038993586 97.34 2 -4.765032732286039 0.46498119866394977 1.0 ['ENSG00000131584|ENST00000354700|ACAP3', 'ACAP3-DVL1|1|fusion', 'nc|ENSG00000131584|Q96P50-4|ACAP3', 'ENST00000467278.5_1_1:1228946-1234134:-|nuORF', 'nc|ENSG00000131584|Q96P50-1|ACAP3'] 44117 23683 ILNLCKVFFVR True NCI_RA007_Epitope_Rep4 1350.7845985305 1350.7835099358601 102.71 2 -4.77780677994681 0.464986818196141 1.0 ['ENST00000331925.6_1_17:79477027-79477201:-|nuORF'] 67793 22484 LTHQKKKLEGQ True PC9_epitope_Rep5 1308.75138382592 1308.75028993586 91.486 2 -4.7925188645078665 0.4650029409293337 1.0 ['ENSG00000173391|ENST00000309539|OLR1', 'nc|ENSG00000173391|P78380-2|OLR1', 'nc|ENSG00000173391|P78380-3|OLR1'] 96147 8450 SEEDRKNVLR True PC9_epitope_Rep2 1244.6473126802 1244.64565490379 37.871 3 -4.797387441946298 0.46501906332384546 1.0 ['ENSG00000109063|ENST00000583535|MYH3'] 95591 6578 SASTYTRP True PC9_epitope_Rep2 881.4242956187699 881.42318993586 30.715 2 -4.806570410032103 0.465035185379687 1.0 ['ENST00000596769.1_1_19:53510963-53514048:+|nuORF'] 11800 19822 DHLEKKTISH True PC9_epitope_Rep5 1206.63568536734 1206.63458993586 81.291 2 -4.826571577548649 0.4650884342309793 1.0 ['CCDC54|p.P215H|1|0.34|ENSG00000138483|chr3:107378231-107378231|C/A|missense_variant'] 52093 18216 KLLSRRMERKK True PC9_epitope_Rep3 1443.8820211559898 1443.88036490379 75.28 3 -4.82775552960324 0.4650884342309793 1.0 ['chr3:182848557-182849180|133|31.68|0.28|6.84|+|1|TE_info:L1M4a1,L1M4a1_dup671,L1,LINE,acceptor,+,182849180,182850081|ATP11B,None|16'] 136929 17833 YKFTKESRH True PC9_epitope_Rep3 1194.61455599994 1194.6129149037902 73.792 3 -4.8386738482494245 0.4650940522827765 1.0 ['ENSG00000163075|ENST00000413369|CFAP221', 'nc|ENSG00000163075|Q4G0U5-2|CFAP221'] 133760 17832 WLLRLWTLYTW True PC9_epitope_Rep4 1549.84455593477 1549.84344993586 76.625 2 -4.846441988292721 0.4650947854854802 1.0 ['ENST00000507414.1_1_5:7890477-7893647:+|nuORF'] 133099 17787 WAPLLLTLL True PC9_epitope_Rep2 1038.6477536211798 1038.64664993586 73.707 2 -4.8573784886597124 0.4650947854854802 1.0 ['nc|ENSG00000211640|P01721|IGLV6-57', 'nc|ENSG00000223350|A0A0B4J1Y8|IGLV9-49'] 128720 13821 VSPKHPEVT True PC9_epitope_Rep5 992.52909504048 992.52798993586 58.181 2 -4.8753630721747125 0.4651018693551775 1.0 ['ENSG00000238083|ENST00000576629|LRRC37A2', 'ENSG00000176681|ENST00000320254|LRRC37A', 'ENSG00000176809|ENST00000584306|LRRC37A3'] 125099 25902 VLPGKKKKKT True PC9_epitope_Rep5 1125.75976368165 1125.75811490379 105.11 3 -4.879488458387285 0.4651018693551775 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 121547 23546 VGKQDPKRHL True PC9_epitope_Rep1 1176.6727395823998 1176.6716499358602 95.361 2 -4.885668628306659 0.4651018693551775 1.0 ['ENSG00000115233|ENST00000409682|PSMD14', 'ENST00000477232.5_1_2:162241962-162267908:+|nuORF', 'ENST00000492908.1_1_2:162265323-162267908:+|nuORF'] 74314 9181 NILELFYYA True NCI_RA007_Epitope_Rep4 1144.580461907 1144.57936993586 42.155 2 -4.889167807888156 0.4651018693551775 1.0 ['RHOT1|p.S156L|2|0.5|ENSG00000126858|chr17:32183199-32183199|C/T|missense_variant'] 119438 2676 VEPKQELK True PC9_epitope_Rep5 969.5494961318898 969.54838993586 14.799 2 -4.890707593949479 0.4651018693551775 1.0 ['nc|ENSG00000170325|Q9NQV6|PRDM10', 'ENSG00000170325|ENST00000360871|PRDM10', 'nc|ENSG00000170325|Q9NQV6-7|PRDM10', 'nc|ENSG00000170325|Q9NQV6-6|PRDM10', 'nc|ENSG00000170325|Q9NQV6-2|PRDM10', 'nc|ENSG00000170325|Q9NQV6-1|PRDM10', 'nc|ENSG00000170325|Q9NQV6-5|PRDM10'] 79941 16990 PIRHVSPARP True PC9_epitope_Rep5 1128.651610215 1128.64996490379 70.371 3 -4.90326141375822 0.46510260233979545 1.0 ['ENST00000564176.5_1_16:31487200-31487686:+|nuORF'] 52554 11965 KPSSTRGGVL True PC9_epitope_Rep2 1000.5665431783599 1000.56544993586 51.343 2 -4.911253269292514 0.46510260233979545 1.0 ['ENSG00000204291|ENST00000375001|COL15A1', 'ENST00000471477.1_1_9:101706343-101748400:+|nuORF'] 21429 25144 ERPHSRYLR True PC9_epitope_Rep5 1212.64758746372 1212.64648993586 101.86 2 -4.926832721872289 0.46510333529362347 1.0 ['nc|ENSG00000142731|O00444-2|PLK4', 'ENSG00000142731|ENST00000270861|PLK4', 'nc|ENSG00000142731|O00444-3|PLK4', 'PLK4|p.W580Yfs*9|1|0.17|ENSG00000142731|chr4:127890142-127890143|-/AT|frameshift_variant'] 87500 13654 QTGTPQRTV True PC9_epitope_Rep5 986.5145076055 986.51340993586 57.543 2 -4.927344788622886 0.46510333529362347 1.0 ['ENSG00000130699|ENST00000252996|TAF4'] 131752 21301 VYADGIFDLF True NCI_RA007_Epitope_Rep4 1158.55972646242 1158.5586299358602 92.339 2 -4.947711523935434 0.4651299553688632 1.0 ['ENSG00000161217|ENST00000431016|PCYT1A', 'ENST00000491544.1_1_3:195974480-195997402:-|nuORF', 'ENST00000473978.5_1_3:195974976-195997402:-|nuORF', 'nc|ENSG00000102230|Q9Y5K3-2|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-4|PCYT1B', 'nc|ENSG00000102230|Q9Y5K3-3|PCYT1B', 'ENSG00000102230|ENST00000379144|PCYT1B'] 78288 6110 PASASQAAGT True PC9_epitope_Rep5 859.4035601741899 859.40246993586 28.489 2 -4.951609108704919 0.465146073551341 1.0 ['AluSx1_dup39678|chr6:158168952-158169236:+|1.0979164187189252|0.0024502072239592|8.81|331.0|13|2|anti-sense', 'nc|ENSG00000120907|P35348-2|ADRA1A'] 90834 24715 RKVKKKRIL True PC9_epitope_Rep5 1167.82918065415 1167.82753490379 100.2 3 -4.964473362662909 0.46515169017190505 1.0 ['ENST00000404867.7_1_5:168093318-168093375:-|nuORF'] 39555 7845 HPGYGAGT True PC9_epitope_Rep5 758.33475233838 758.33364993586 35.119 2 -4.968838865623218 0.4651602335251376 1.0 ['ENSG00000179409|ENST00000319004|GEMIN4'] 13256 9781 DLVLNVWDF True NCI_RA007_Epitope_Rep4 1119.5600608155898 1119.5589699358602 44.472 2 -4.983144845679571 0.4651602335251376 1.0 ['LRRK2|p.N2468Kfs*14|1|0.3|ENSG00000188906|chr12:40367013-40367014|-/A|frameshift_variant', 'ENSG00000188906|ENST00000298910|LRRK2', 'ENST00000479187.5_1_12:40692272-40758932:+|nuORF'] 134446 20551 WTIFLFLRWVL True NCI_RA007_Epitope_Rep5 1492.8594777229198 1492.85838993586 85.991 2 -5.0029334415257685 0.4651602335251376 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 100035 8977 SLKKDSNP True PC9_epitope_Rep5 887.47124581119 887.47014993586 39.473 2 -5.004414267292375 0.4651602335251376 1.0 ['ENST00000538944.1_1_11:68512411-68514777:-|nuORF', 'nc|ENSG00000132749|Q9Y4I5-3|TESMIN', 'nc|ENSG00000132749|Q9Y4I5-2|TESMIN', 'ENSG00000132749|ENST00000255087|TESMIN', 'ENST00000540869.5_1_11:68500318-68517720:-|nuORF'] 328 9524 AAIKGNQESVK True PC9_epitope_Rep4 1143.62478633047 1143.62368993586 44.245 2 -5.023843270905642 0.4651602335251376 1.0 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 96827 7595 SESKAREL True PC9_epitope_Rep5 918.4770594676199 918.47596993586 34.164 2 -5.027933455870685 0.4651602335251376 1.0 ['ENSG00000124784|ENST00000379834|RIOK1', 'ENST00000484626.1_1_6:7404210-7405259:+|nuORF'] 121429 6685 VGIFCILL True NCI_RA007_Epitope_Rep4 876.51429692348 876.5131899358599 32.338 2 -5.033753239657369 0.4651602335251376 1.0 ['ENSG00000198964|ENST00000361781|SGMS1', 'nc|ENSG00000198964|Q86VZ5-2|SGMS1'] 51892 21780 KKRLKKEKKRL True PC9_epitope_Rep3 1453.9932858571299 1453.99218993586 89.075 2 -5.044984723647103 0.4651602335251376 1.0 ['ENSG00000101361|ENST00000329276|NOP56', 'ENST00000490753.1_1_20:2637050-2637903:+|nuORF', 'ENST00000466447.5_1_20:2636822-2638033:+|nuORF', 'ENST00000492135.5_1_20:2636822-2638937:+|nuORF', 'ENST00000462630.5_1_20:2637388-2638937:+|nuORF'] 27221 16815 FLVFLLMM True NCI_RA007_Epitope_Rep5 1012.5489681800399 1012.54786993586 71.426 2 -5.049620896257822 0.4651602335251376 1.0 ['ENST00000531428.1_1_11:17099415-17121458:-|nuORF', 'ENST00000265970.11_1_11:17115925-17118806:-|nuORF'] 81569 23857 PRIRYRKKKRI True PC9_epitope_Rep3 1512.9841181557597 1512.98302993586 97.051 2 -5.0820843907412 0.46517634952801956 1.0 ['nc|ENSG00000079263|Q13342-3|SP140', 'nc|ENSG00000079263|Q13342-6|SP140', 'nc|ENSG00000079263|Q13342-5|SP140', 'ENSG00000079263|ENST00000392045|SP140'] 616 10747 AASQGHAECL True PC9_epitope_Rep5 985.42872937621 985.42762993586 46.33 2 -5.109310146968297 0.465219080418736 1.0 ['ENSG00000064692|ENST00000261368|SNCAIP', 'nc|ENSG00000064692|Q9Y6H5-3|SNCAIP', 'ENST00000510003.5_1_5:121726829-121776497:+|nuORF', 'nc|ENSG00000064692|Q9Y6H5-6|SNCAIP'] 100779 23171 SLRQQLRER True PC9_epitope_Rep5 1184.6738022115599 1184.6727099358602 94.109 2 -5.11628393033187 0.465219080418736 1.0 ['ENSG00000129646|ENST00000680821|QRICH2', 'nc|ENSG00000129646|Q9H0J4|QRICH2', 'nc|ENSG00000129646|Q9H0J4-3|QRICH2', 'ENST00000524722.1_2_17:74270319-74300575:-|nuORF'] 55421 12379 LATKKYTQAGN True PC9_epitope_Rep5 1193.6404363946099 1193.63878490379 52.612 3 -5.155730260827009 0.4652478844255927 1.0 ['ENSG00000187535|ENST00000426508|IFT140', 'nc|ENSG00000187535|Q96RY7-2|IFT140', 'ENST00000565298.5_1_16:1560947-1574065:-|nuORF'] 59026 15102 LGARAQPRV True PC9_epitope_Rep5 966.5722972651398 966.57120993586 63.096 2 -5.1649960403018245 0.4652478844255927 1.0 ['ENST00000225688.3_1_17:17398000-17398240:-|nuORF'] 134445 20544 WTIFLFLRWVL True NCI_RA007_Epitope_Rep5 1492.8594777229198 1492.85782490379 85.963 3 -5.171694333494948 0.4652478844255927 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 122588 5463 VGTGKVACS True PC9_epitope_Rep2 820.41128840692 820.41018993586 26.408 2 -5.174769501698084 0.4652478844255927 1.0 ['ENST00000451982.6_2_3:195408438-195423327:+|nuORF'] 15925 22624 EDRYYRENMHR True PC9_epitope_Rep5 1567.69500823195 1567.6939099358601 92.022 2 -5.176596348896421 0.4652478844255927 1.0 ['ENSG00000171867|ENST00000379440|PRNP'] 90506 7641 RKATRRMMMLK True PC9_epitope_Rep2 1420.7941347517196 1420.79248490379 34.76 3 -5.180701606591681 0.4652478844255927 1.0 ['ENST00000216832.8_1_14:39645780-39646821:+|nuORF'] 116155 18525 TVTELRNR True PC9_epitope_Rep2 987.5461420869499 987.54504993586 76.601 2 -5.194954684667134 0.4652478844255927 1.0 ['ENSG00000115484|ENST00000394440|CCT4', 'nc|ENSG00000115484|P50991-2|CCT4'] 68317 12128 LTRSPLRKNRN True PC9_epitope_Rep5 1353.7953143265697 1353.7942099358602 51.639 2 -5.217540077302657 0.4652654565306401 1.0 ['ENST00000373277.8_1_9:130500670-130500874:-|nuORF'] 55289 9317 LAREQQRRWV True PC9_epitope_Rep5 1340.74255047772 1340.7409049037901 40.791 3 -5.225153326194798 0.4652654565306401 1.0 ['nc|ENSG00000135436|Q8IYM0-2|FAM186B', 'ENST00000533372.1_1_12:49976813-49999059:-|nuORF', 'ENSG00000135436|ENST00000257894|FAM186B'] 134496 19134 WVALITLLMLP True NCI_RA007_Epitope_Rep5 1268.75665244716 1268.75554993586 80.47 2 -5.2486362857907505 0.4652654565306401 1.0 ['GPRC5A|p.W227L|1|0.41|ENSG00000013588|chr12:12908929-12908929|G/T|missense_variant'] 90736 25254 RKQLHKLRY True PC9_epitope_Rep2 1240.7516586094398 1240.75107496793 102.81 1 -5.255418633316855 0.4652654565306401 1.0 ['nc|ENSG00000100241|O95248|SBF1', 'ENSG00000100241|ENST00000380817|SBF1', 'nc|ENSG00000100241|O95248-4|SBF1'] 3353 8543 AGHRSEGPSL True PC9_epitope_Rep5 1009.4941065140899 1009.49300993586 37.805 2 -5.259295401294626 0.4652654565306401 1.0 ['ENST00000407479.5_1_16:3692941-3705863:+|nuORF'] 91032 23164 RLKTAAAAAA True PC9_epitope_Rep2 942.5610638750998 942.55996993586 94.586 2 -5.288737310621892 0.46527179960946524 1.0 ['ENSG00000180914|ENST00000316793|OXTR'] 128529 15954 VSGRAALR True PC9_epitope_Rep5 828.49298431528 828.49188993586 66.356 2 -5.29059511584914 0.46527179960946524 1.0 ['nc|ENSG00000072110|P12814-4|ACTN1'] 103290 9848 SQTQKAKFS True PC9_epitope_Rep2 1023.5349086969098 1023.5343749679301 43.215 1 -5.3012219819666395 0.46527179960946524 1.0 ['ENSG00000111404|ENST00000538724|RERGL', 'nc|ENSG00000111404|Q9H628|RERGL'] 85161 7887 QIYHEKQRREL True PC9_epitope_Rep5 1498.80045927666 1498.7988149037901 35.28 3 -5.307449913071677 0.4652774132591465 1.0 ['ENSG00000100221|ENST00000683374|JOSD1'] 41151 13116 HYRFRMKQ True PC9_epitope_Rep4 1164.5974664671598 1164.5963699358601 58.345 2 -5.323717173261893 0.4652781422887557 1.0 ['SDK1|p.P1422Lfs*13|1|0.1|ENSG00000146555|chr7:4145758-4145759|CC/T|frameshift_variant', 'nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 128764 6750 VSQKNESV True PC9_epitope_Rep5 889.4505103666099 889.44940993586 30.935 2 -5.324747502878258 0.4652781422887557 1.0 ['ENST00000459963.5_1_1:160321502-160323118:+|nuORF', 'nc|ENSG00000162736|Q92542-2|NCSTN', 'ENSG00000162736|ENST00000294785|NCSTN'] 4707 5611 ALDSDSRP True PC9_epitope_Rep2 859.40356017419 859.40246993586 26.968 2 -5.3297501254610085 0.46528178697765227 1.0 ['nc|ENSG00000164488|Q5SW24-4|DACT2', 'ENSG00000164488|ENST00000366795|DACT2'] 123054 4445 VGYSGNGR True PC9_epitope_Rep3 808.38276515996 808.38166993586 22.197 2 -5.340108760028724 0.46528178697765227 1.0 ['ENSG00000161996|ENST00000293879|WDR90', 'ENST00000546516.5_1_16:705169-713132:+|nuORF', 'ENST00000552728.5_1_16:708591-715679:+|nuORF', 'ENST00000552683.5_1_16:707859-713132:+|nuORF', 'ENST00000547407.5_1_16:706280-710806:+|nuORF'] 80145 22260 PKPPGEEAE True PC9_epitope_Rep2 952.45017601344 952.44906993586 91.102 2 -5.360828259072947 0.46528178697765227 1.0 ['ENST00000518883.6_1_8:38244092-38245477:+|nuORF'] 58953 7681 LFYFIYFIFRF True NCI_RA007_Epitope_Rep5 1574.83259426874 1574.83093490379 36.248 3 -5.372329501384318 0.46528178697765227 1.0 ['ENST00000590478.1_1_17:33569582-33569933:-|nuORF'] 60098 19858 LHTRTRSL True PC9_epitope_Rep5 982.5672118847 982.56610993586 81.433 2 -5.396457451993636 0.46528178697765227 1.0 ['ENSG00000131381|ENST00000253699|RBSN'] 105694 19609 SVGVETGETKK True PC9_epitope_Rep3 1133.5928174958499 1133.59172993586 80.663 2 -5.404033076752088 0.46528178697765227 1.0 ['ENSG00000187730|ENST00000378585|GABRD'] 47951 9120 KAAQVTAG True PC9_epitope_Rep2 744.4130026590799 744.4124549679301 40.419 1 -5.411557091325709 0.46528178697765227 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 22593 24535 ETPPEAKKTE True PC9_epitope_Rep2 1128.5662683948399 1128.56461490379 99.993 3 -5.412804005977542 0.46528178697765227 1.0 ['ENSG00000182463|ENST00000371497|TSHZ2', 'nc|ENSG00000182463|Q9NRE2-2|TSHZ2'] 31064 23136 GAVTHRPAP True PC9_epitope_Rep5 904.4878989348398 904.4873549679301 93.981 1 -5.419089594661228 0.46528178697765227 1.0 ['ENST00000392607.7_2_10:134901465-134902304:+|nuORF'] 42503 23423 IERKYSRKK True PC9_epitope_Rep3 1206.7196897748197 1206.7180349037899 95.374 3 -5.425627451098722 0.46528178697765227 1.0 ['ZNF658|p.S155I|1|0.21|ENSG00000274349|chr9:66918030-66918030|G/T|missense_variant'] 28220 23589 FRRKLRELQR True PC9_epitope_Rep4 1400.8476842526 1400.84658993586 99.042 2 -5.460957765994068 0.4653349987928917 1.0 ['nc|ENSG00000182329|Q0VF49-2|KIAA2012', 'nc|ENSG00000182329|Q0VF49|KIAA2012', 'ENSG00000182329|ENST00000498697|KIAA2012'] 6027 5815 APLPHQRKGEN True PC9_epitope_Rep5 1245.65781779425 1245.65617490379 27.359 3 -5.46240594055776 0.4653349987928917 1.0 ['ENST00000590474.5_1_17:67411013-67501942:+|nuORF'] 15857 5173 EDLRNDEHSP True PC9_epitope_Rep5 1210.52144346074 1210.5203499358602 24.917 2 -5.477201065667527 0.4653413384834999 1.0 ['nc|ENSG00000049246|P56645|PER3', 'ENSG00000049246|ENST00000377532|PER3'] 47950 9027 KAAQVTAG True PC9_epitope_Rep2 744.4130026590799 744.4124549679301 40.071 1 -5.48242790184432 0.4653413384834999 1.0 ['ENST00000355202.8_1_19:38210295-38210535:-|nuORF'] 131717 21406 VWVPFIYSF True NCI_RA007_Epitope_Rep3 1156.59571804832 1156.5946299358602 93.037 2 -5.486066475284334 0.4653413384834999 1.0 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 123299 25062 VHSHDGVV True PC9_epitope_Rep4 848.41406528824 848.41296993586 104.96 2 -5.496739695963644 0.4653420660411025 1.0 ['nc|ENSG00000174989|Q8N3Y1-2|FBXW8', 'ENSG00000174989|ENST00000652555|FBXW8'] 39331 20881 HLSIEQSRRD True PC9_epitope_Rep5 1239.63199696923 1239.63088993586 85.371 2 -5.497010046948083 0.4653420660411025 1.0 ['ENST00000563423.2_1_15:37109670-37110018:-|nuORF'] 120783 8505 VGCMEKEEDER True PC9_epitope_Rep3 1323.5435014282698 1323.5424099358602 37.675 2 -5.52632270971796 0.4653427935681599 1.0 ['ENSG00000128482|ENST00000461366|RNF112', 'nc|ENSG00000128482|Q9ULX5-2|RNF112'] 29537 11250 FVIFMFFLN True NCI_RA007_Epitope_Rep5 1176.6041745570399 1176.60253490379 49.915 3 -5.538932544148449 0.4653427935681599 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 79056 21115 PFRRHDSI True PC9_epitope_Rep5 1026.5359117564199 1026.53480993586 86.284 2 -5.599468751572016 0.4653750078717018 1.0 ['ENSG00000165195|ENST00000333590|PIGA'] 125095 25787 VLPGKKKKKT True PC9_epitope_Rep2 1125.75976368165 1125.75811490379 104.92 3 -5.6056361003216715 0.4653750078717018 1.0 ['ENSG00000150990|ENST00000308736|DHX37'] 42725 12195 IFASRQTGKHT True PC9_epitope_Rep5 1244.66256882152 1244.6614699358602 51.898 2 -5.621775552310373 0.46538061902412914 1.0 ['ENSG00000145041|ENST00000684031|DCAF1', 'nc|ENSG00000145041|Q9Y4B6-2|DCAF1'] 122308 5641 VGRVGKNA True PC9_epitope_Rep4 799.46643521427 799.46532993586 28.495 2 -5.63152838079743 0.46538134570376044 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 110362 19889 TILLTKFFMLL True NCI_RA007_Epitope_Rep4 1338.79851725914 1338.79740993586 85.971 2 -5.632318876101039 0.46538134570376044 1.0 ['ENSG00000158158|ENST00000377075|CNNM4'] 43805 7111 IKKLKRKPP True PC9_epitope_Rep2 1106.76518341526 1106.76408993586 32.749 2 -5.676712269783743 0.46540867301960454 1.0 ['nc|ENSG00000138684|Q9HBE4-2|IL21', 'ENSG00000138684|ENST00000648588|IL21'] 44114 20570 ILNHMKRAT True PC9_epitope_Rep3 1082.6018831412598 1082.6007899358601 84.388 2 -5.676771745923103 0.46540867301960454 1.0 ['nc|ENSG00000014257|P15309-3|ACP3', 'ENSG00000014257|ENST00000336375|ACP3', 'nc|ENSG00000014257|P15309-2|ACP3'] 48271 9075 KDKLNTQSTY True PC9_epitope_Rep2 1196.60371653272 1196.60260993586 40.251 2 -5.68283881658605 0.46540867301960454 1.0 ['NRP1|p.F660Hfs*6|1|0.2|ENSG00000099250|chr10:33192357-33192365|GTGGCAGAA/TGACATG|frameshift_variant', 'ENSG00000099250|ENST00000374867|NRP1'] 2931 11626 AFFLFMDLF True NCI_RA007_Epitope_Rep5 1149.5568900114497 1149.55525490379 51.371 3 -5.703325277401836 0.4654198937934219 1.0 ['ENST00000380874.3_1_6:1612762-1612825:+|nuORF'] 122182 20347 VGRKTALH True PC9_epitope_Rep5 880.52428444356 880.52318993586 83.301 2 -5.711232308472065 0.4654198937934219 1.0 ['nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF', 'nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6'] 90733 23811 RKQCQRVL True PC9_epitope_Rep2 1029.5865674302897 1029.5854699358601 97.059 2 -5.780258541902227 0.46545698783674583 1.0 ['ENST00000379933.7_1_6:7176934-7182129:+|nuORF', 'ENST00000467782.5_3_6:7176934-7182121:+|nuORF', 'ENST00000491191.5_3_6:7176934-7181518:+|nuORF'] 52011 15658 KLETHIEK True PC9_epitope_Rep4 996.5603951687599 996.55928993586 68.155 2 -5.800872606643517 0.4654584378377811 1.0 ['nc|ENSG00000132952|Q5W0Q7-2|USPL1', 'ENSG00000132952|ENST00000255304|USPL1'] 68318 12234 LTRSPLRKNRN True PC9_epitope_Rep5 1353.7953143265697 1353.7942099358602 52.044 2 -5.801868794593307 0.4654584378377811 1.0 ['ENST00000373277.8_1_9:130500670-130500874:-|nuORF'] 51873 9812 KKQITDHTV True PC9_epitope_Rep5 1068.5927579262 1068.5916699358602 42.709 2 -5.803903936268031 0.4654584378377811 1.0 ['nc|ENSG00000057294|Q99959|PKP2'] 63135 23567 LNQLQGKKS True PC9_epitope_Rep2 1014.5821932424999 1014.5816749679301 96.125 1 -5.806647220312829 0.4654584378377811 1.0 ['CON__Q2HJF0'] 84452 17197 QGKRKTSI True PC9_epitope_Rep5 916.54541381096 916.54430993586 71.168 2 -5.829141753058817 0.4654640473492003 1.0 ['ENSG00000102362|ENST00000372989|SYTL4', 'ENST00000372981.1_1_X:99941666-99941798:-|nuORF'] 61665 9977 LLHPKEAT True PC9_epitope_Rep2 907.5127167003501 907.51160993586 43.706 2 -5.8589273326543 0.4655011385936008 1.0 ['ENST00000318003.11_1_19:14041215-14041674:+|nuORF'] 327 10833 AAIKGNQESVK True PC9_epitope_Rep3 1143.62478633047 1143.62368993586 46.641 2 -5.887694162866084 0.46553822905954206 1.0 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 85447 23191 QLFRTKSKR True PC9_epitope_Rep3 1162.69347502698 1162.69183490379 94.474 3 -5.897023349294959 0.4655389523169913 1.0 ['ENSG00000171219|ENST00000342711|CDC42BPG'] 58325 10422 LETRPERQEC True PC9_epitope_Rep5 1259.59283457919 1259.59172993586 45.073 2 -5.940457765615553 0.4655389523169913 1.0 ['ENSG00000204308|ENST00000375094|RNF5', 'ENST00000487940.1_1_6:32146222-32147541:+|nuORF'] 126147 3043 VPFFVFFLL True NCI_RA007_Epitope_Rep5 1127.6419399647498 1127.64028490379 16.867 3 -5.949015057076485 0.4655501689437344 1.0 ['nc|ENSG00000184999|Q63ZE4-2|SLC22A10', 'ENSG00000184999|ENST00000332793|SLC22A10'] 114950 18512 TTGTASGG True PC9_epitope_Rep5 650.2871334396199 650.28658496793 76.23 1 -5.957433327191437 0.4655501689437344 1.0 ['ENSG00000109927|ENST00000392793|TECTA'] 116253 15718 TVVARARG True PC9_epitope_Rep5 828.4929843152798 828.49188993586 65.462 2 -5.971480957928274 0.4655713281504097 1.0 ['ENST00000233616.8_1_2:74692396-74692498:-|nuORF', 'ENST00000452063.6_1_2:74692055-74692498:-|nuORF', 'ENST00000462443.1_1_2:74690388-74692498:-|nuORF'] 74520 9796 NKTEVTHQVP True PC9_epitope_Rep2 1151.59348620219 1151.5923899358602 43.018 2 -5.991360297365614 0.4655713281504097 1.0 ['ENSG00000168631|ENST00000462446|MUCL3', 'nc|ENSG00000168631|Q3MIW9-2|MUCL3', 'nc|ENSG00000168631|Q3MIW9|MUCL3'] 11223 12611 DENEKQERL True PC9_epitope_Rep5 1159.5469299325898 1159.5452849037902 53.509 3 -5.9951399209555865 0.4655713281504097 1.0 ['ADCY1|p.P287Lfs*16|1|0.35|ENSG00000164742|chr7:45610445-45610445|C/-|frameshift_variant', 'ENSG00000164742|ENST00000297323|ADCY1'] 38193 10093 HESPDSAAP True PC9_epitope_Rep5 909.38282472961 909.38172993586 43.805 2 -5.9979049190072455 0.4655713281504097 1.0 ['ENST00000258439.7_1_2:96920659-96920731:-|nuORF'] 133583 11178 WIFRPLYLFFF True NCI_RA007_Epitope_Rep3 1547.8329286219093 1547.83182993586 51.076 2 -6.015713865904848 0.4655713281504097 1.0 ['ENST00000508170.5_1_4:55131036-55131279:+|nuORF'] 8280 12812 ATKKKEGTL True PC9_epitope_Rep4 974.5760452328998 974.57494993586 57.143 2 -6.021972133099591 0.4655713281504097 1.0 ['nc|ENSG00000138182|Q96Q89-3|KIF20B', 'ENSG00000138182|ENST00000371728|KIF20B', 'nc|ENSG00000138182|Q96Q89-2|KIF20B', 'nc|ENSG00000138182|Q96Q89-5|KIF20B'] 82829 6057 PVSSHTPPGT True PC9_epitope_Rep2 978.4770594676199 978.47596993586 28.692 2 -6.022204474105656 0.4655713281504097 1.0 ['nc|ENSG00000214900|Q8WXQ3|LINC01599'] 85708 16857 QLSDGKKFK True PC9_epitope_Rep2 1049.5869442697701 1049.58584993586 70.088 2 -6.053405344062741 0.4655713281504097 1.0 ['nc|ENSG00000176834|Q8N0Z9-2|VSIG10', 'ENSG00000176834|ENST00000359236|VSIG10'] 92856 24842 RRLRKALLEKG True PC9_epitope_Rep2 1338.8571863071395 1338.85555490379 101.24 3 -6.0604311807372975 0.4655713281504097 1.0 ['nc|ENSG00000012817|Q9BY66-2|KDM5D', 'ENSG00000012817|ENST00000317961|KDM5D', 'nc|ENSG00000012817|Q9BY66-3|KDM5D', 'ENST00000497100.5_1_X:53227940-53240837:-|nuORF', 'ENST00000469599.6_1_Y:21877495-21878275:-|nuORF', 'nc|ENSG00000126012|P41229-2|KDM5C', 'nc|ENSG00000126012|P41229-5|KDM5C', 'ENSG00000126012|ENST00000375401|KDM5C', 'nc|ENSG00000126012|P41229-4|KDM5C', 'nc|ENSG00000126012|P41229-3|KDM5C'] 65671 22505 LSHAHPPG True PC9_epitope_Rep5 814.4085859849799 814.40803496793 91.57 1 -6.060484272773076 0.4655713281504097 1.0 ['ENST00000565166.2_1_15:95399162-95399906:+|nuORF'] 129763 19466 VTKLSPEKKP True PC9_epitope_Rep5 1125.6757592741699 1125.67466993586 79.929 2 -6.061447884374823 0.4655713281504097 1.0 ['ENSG00000143867|ENST00000272223|OSR1'] 61318 19375 LLECRHRPC True PC9_epitope_Rep5 1125.5535530498498 1125.55189490379 79.573 3 -6.068527500565991 0.4655713281504097 1.0 ['nc|ENSG00000102103|O60828-8|PQBP1'] 92251 24463 RQKQNKYPI True PC9_epitope_Rep5 1173.66184054553 1173.66019490379 99.164 3 -6.076670351034582 0.4655713281504097 1.0 ['ENSG00000125772|ENST00000379019|GPCPD1'] 119161 10346 VEKDEGRTL True PC9_epitope_Rep3 1045.54038800017 1045.53928993586 44.74 2 -6.078479323174144 0.4655713281504097 1.0 ['nc|ENSG00000112659|Q8IWT3-3|CUL9', 'CUL9|p.Q2357Gfs*83|2|0.22|ENSG00000112659|chr6:43222815-43222816|CA/G|frameshift_variant', 'ENSG00000112659|ENST00000252050|CUL9', 'ENST00000515773.5_1_6:43164260-43192180:+|nuORF'] 34390 9625 GPTGDPVK True PC9_epitope_Rep5 769.39701824177 769.39592993586 41.988 2 -6.103580287684397 0.4655713281504097 1.0 ['PNPLA6|p.D881Tfs*24|1|0.35|ENSG00000032444|chr19:7554696-7554696|G/-|frameshift_variant', 'ENSG00000032444|ENST00000600737|PNPLA6', 'nc|ENSG00000032444|Q8IY17-3|PNPLA6', 'nc|ENSG00000032444|Q8IY17|PNPLA6', 'nc|ENSG00000032444|Q8IY17-5|PNPLA6', 'nc|ENSG00000032444|Q8IY17-2|PNPLA6'] 79367 22723 PGKTTAGSV True PC9_epitope_Rep5 816.4341320264799 816.43302993586 92.408 2 -6.182715468560627 0.4656825716563851 1.0 ['TNKS1BP1|p.S1554Vfs*72|1|0.21|ENSG00000149115|chr11:57302483-57302483|G/-|frameshift_variant', 'ENSG00000149115|ENST00000358252|TNKS1BP1', 'ENST00000528882.5_1_11:57067274-57087552:-|nuORF', 'nc|ENSG00000149115|Q9C0C2-2|TNKS1BP1'] 91216 23735 RLRLRKERVSD True PC9_epitope_Rep5 1426.84807817542 1426.84642490379 96.277 3 -6.187916111751351 0.4656825716563851 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 94195 11399 RWLWWQPWWWW True NCI_RA007_Epitope_Rep1 1814.8622716875798 1814.86116993586 48.308 2 -6.194574500426849 0.4656825716563851 1.0 ['chr12:54282823-54283827|502|38.83|0.0|21.89|+|1|HNRNPA1,HNRNPA1|1'] 36954 22652 GVRGSGSG True PC9_epitope_Rep4 675.33000131111 675.32945496793 95.361 1 -6.20356626478769 0.4656881773450696 1.0 ['ENST00000436944.5_1_7:73098152-73100976:+|nuORF'] 39206 12823 HLGPEKEEE True PC9_epitope_Rep5 1066.49310345458 1066.49200993586 54.333 2 -6.213952451277149 0.46569378291613334 1.0 ['ENSG00000144535|ENST00000325385|DIS3L2', 'ENST00000433430.5_1_2:233201010-233201337:+|nuORF', 'AGAP1-DIS3L2|1|fusion'] 45305 5663 ISARHFQR True PC9_epitope_Rep5 1013.5518961737298 1013.5507899358599 26.781 2 -6.277751634829255 0.4657518438086845 1.0 ['ENSG00000108602|ENST00000225740|ALDH3A1', 'ENST00000479677.6_1_17:19641536-19646703:-|nuORF', 'ENST00000487650.2_1_17:19643643-19644639:-|nuORF'] 122726 15997 VGVAHRIH True PC9_epitope_Rep5 887.5089687325899 887.50786993586 66.522 2 -6.296617245333036 0.4657630532621353 1.0 ['nc|ENSG00000119242|Q53HC0-2|CCDC92', 'ENSG00000119242|ENST00000238156|CCDC92'] 102853 4658 SQGWFGIWIF True NCI_RA007_Epitope_Rep5 1239.6076797143498 1239.60604490379 24.602 3 -6.297009923655753 0.4657630532621353 1.0 ['PKHD1L1|p.M2624I|1|0.45|ENSG00000205038|chr8:109464704-109464704|G/T|missense_variant'] 120405 7138 VFSRKDTSK True PC9_epitope_Rep5 1066.5771078620598 1066.5760099358602 32.426 2 -6.327173198480479 0.46576865781246723 1.0 ['nc|ENSG00000110723|Q8NEV8-2|EXPH5', 'ENSG00000110723|ENST00000265843|EXPH5'] 43807 8568 IKKLKRKPP True PC9_epitope_Rep2 1106.76518341526 1106.76408993586 38.317 2 -6.35630959187888 0.46579524354038376 1.0 ['nc|ENSG00000138684|Q9HBE4-2|IL21', 'ENSG00000138684|ENST00000648588|IL21'] 117971 10454 VASALEKK True PC9_epitope_Rep5 844.50181766348 844.50072993586 45.198 2 -6.382233799840297 0.46579596118541833 1.0 ['MAZ|p.T268Rfs*27|1|0.77|ENSG00000103495|chr16:29807585-29807585|C/-|frameshift_variant', 'nc|ENSG00000103495|P56270-3|MAZ', 'ENSG00000103495|ENST00000322945|MAZ', 'nc|ENSG00000103495|P56270-2|MAZ'] 52448 13993 KPHALQAC True PC9_epitope_Rep5 866.44325724154 866.44214993586 58.846 2 -6.383168593041883 0.46579596118541833 1.0 ['ENST00000561483.5_1_15:84323016-84694242:+|nuORF', 'nc|ENSG00000156218|P82987-2|ADAMTSL3', 'ENSG00000156218|ENST00000286744|ADAMTSL3'] 139050 21297 YSKQPFRR True PC9_epitope_Rep5 1080.58286194884 1080.5817699358602 86.971 2 -6.390662721662069 0.4658015651553616 1.0 ['ENSG00000169851|ENST00000695919|PCDH7'] 80801 22654 PLSTARRV True PC9_epitope_Rep5 898.5348491272599 898.53374993586 92.139 2 -6.416397933362164 0.4658281494225141 1.0 ['ENST00000372562.1_1_1:42922065-42925274:+|nuORF'] 12430 8169 DKKGCHCVI True PC9_epitope_Rep2 1001.4786567740899 1001.47754993586 36.777 2 -6.430546468110388 0.46584424303457533 1.0 ['ENSG00000133818|ENST00000256196|RRAS2', 'nc|ENSG00000133818|P62070-4|RRAS2', 'nc|ENSG00000133818|P62070-3|RRAS2', 'nc|ENSG00000133818|P62070-2|RRAS2'] 111635 16771 TLNRQKYRHVD True PC9_epitope_Rep5 1428.75859446468 1428.7574899358601 69.514 2 -6.460516783311081 0.465856165820501 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 45474 16633 ISEKKYRQP True PC9_epitope_Rep5 1147.6349570913499 1147.63386993586 68.985 2 -6.46083005457025 0.465856165820501 1.0 ['NEB|p.G6548Afs*3|1|0.5|ENSG00000183091|chr2:151490458-151490459|-/G|frameshift_variant', 'nc|ENSG00000183091|P20929-3|NEB', 'ENSG00000183091|ENST00000397345|NEB', 'nc|ENSG00000183091|P20929-4|NEB', 'nc|ENSG00000183091|P20929-1|NEB', 'NEB|p.L3192*|1|0.13|ENSG00000183091|chr2:151627046-151627046|G/-|frameshift_variant', 'NEB|p.G2664Afs*5|1|0.3|ENSG00000183091|chr2:151643321-151643321|T/-|frameshift_variant'] 101395 7337 SNAISRQS True PC9_epitope_Rep3 861.4304436283701 861.42934993586 33.232 2 -6.46150561473111 0.465856165820501 1.0 ['ENST00000368653.7_1_10:129906207-129906252:-|nuORF'] 88503 23399 RAASEKRVKKI True PC9_epitope_Rep5 1284.79900272468 1284.7979099358602 94.985 2 -6.4748834101144075 0.465856165820501 1.0 ['ENSG00000127578|ENST00000319070|WFIKKN1'] 122352 15847 VGSARALR True PC9_epitope_Rep5 828.49298431528 828.49188993586 65.946 2 -6.490408268688179 0.4658617687474432 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 122350 18603 VGSARALR True PC9_epitope_Rep3 828.49298431528 828.49188993586 76.779 2 -6.543529540825783 0.46589121268695854 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 76116 6184 NRPHRTVFTR True PC9_epitope_Rep4 1282.70068566574 1282.69903490379 30.822 3 -6.547717953827011 0.46589121268695854 1.0 ['ENSG00000130449|ENST00000252744|ZSWIM6'] 43210 7446 IGVFVLCWFP True PC9_epitope_Rep2 1179.61507359391 1179.61342490379 34.017 3 -6.55074923642757 0.46589121268695854 1.0 ['ENSG00000274286|ENST00000620793|ADRA2B'] 79755 9696 PHTAKKAI True PC9_epitope_Rep4 864.5181364339599 864.51702993586 44.931 2 -6.569740320875934 0.46589121268695854 1.0 ['nc|ENSG00000168026|Q8NDW8-5|TTC21A', 'ENSG00000168026|ENST00000683103|TTC21A', 'nc|ENSG00000168026|Q8NDW8|TTC21A', 'nc|ENSG00000168026|Q8NDW8-7|TTC21A', 'TTC21A|p.D158V|1|0.31|ENSG00000168026|chr3:39112495-39112495|A/T|missense_variant', 'ENST00000479954.5_1_3:39149250-39159704:+|nuORF'] 117968 13656 VARTSSAP True PC9_epitope_Rep2 787.41881631551 787.41770993586 57.82 2 -6.572712113620895 0.46589121268695854 1.0 ['ENST00000398868.7_1_11:63398693-63398756:-|nuORF'] 82677 3815 PVMWLSVALL True NCI_RA007_Epitope_Rep4 1127.64128834175 1127.6396549037902 20.86 3 -6.573059921410044 0.46589121268695854 1.0 ['ENSG00000178033|ENST00000368599|CALHM5'] 121649 23174 VGLGRKRSSRS True PC9_epitope_Rep5 1201.7003513125699 1201.69924993586 94.12 2 -6.582107727307212 0.46589121268695854 1.0 ['ENST00000353703.8_2_20:43514450-43530178:+|nuORF', 'ENST00000428262.1_3_20:43514450-43516249:+|nuORF', 'ENST00000372839.7_2_20:43514450-43530188:+|nuORF'] 81101 25095 PPGHEPGS True PC9_epitope_Rep5 776.3453170220799 776.34420993586 101.67 2 -6.582487125673122 0.46589121268695854 1.0 ['ENST00000376227.3_1_X:49093621-49098531:+|nuORF'] 127875 23441 VRPDGQPKP True PC9_epitope_Rep5 992.5403284305199 992.53922993586 95.149 2 -6.586445827050475 0.46589121268695854 1.0 ['ENSG00000105726|ENST00000357324|ATP13A1', 'ATP13A1|p.P396Hfs*8|1|0.25|ENSG00000105726|chr19:19656080-19656080|G/-|frameshift_variant', 'ENST00000487364.1_1_19:19771386-19774475:-|nuORF'] 48016 12335 KAKELDPSN True PC9_epitope_Rep4 1000.5189242795999 1000.51782993586 55.256 2 -6.618411629893543 0.4658968146586535 1.0 ['ENST00000394563.4_1_X:85340081-85340624:-|nuORF'] 4461 6719 AKELSAVHSSH True PC9_epitope_Rep5 1164.58873517492 1164.5876299358601 30.815 2 -6.652738886812012 0.4659338815237456 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 128467 9415 VSETGKKEV True PC9_epitope_Rep3 975.5236753068699 975.52256993586 41.151 2 -6.672628050471238 0.4659394829304106 1.0 ['nc|ENSG00000111783|Q33E94-4|RFX4', 'ENST00000536688.5_1_12:106995054-107126892:+|nuORF', 'ENSG00000111783|ENST00000392842|RFX4', 'nc|ENSG00000111783|Q33E94-2|RFX4', 'nc|ENSG00000111783|Q33E94-3|RFX4'] 121648 23111 VGLGRKRSSRS True PC9_epitope_Rep3 1201.7003513125699 1201.69924993586 94.164 2 -6.677652980977165 0.46594019738429104 1.0 ['ENST00000353703.8_2_20:43514450-43530178:+|nuORF', 'ENST00000428262.1_3_20:43514450-43516249:+|nuORF', 'ENST00000372839.7_2_20:43514450-43530188:+|nuORF'] 9734 15182 AYKQRRDKLYV True PC9_epitope_Rep5 1438.80448202794 1438.80283490379 63.406 3 -6.683519449323516 0.46594019738429104 1.0 ['nc|ENSG00000125850|Q9BRP0-2|OVOL2', 'ENSG00000125850|ENST00000278780|OVOL2', 'ENST00000483661.5_1_20:18005282-18039681:-|nuORF'] 109337 5904 TGHPPGPT True PC9_epitope_Rep3 762.36605246666 762.36494993586 27.771 2 -6.7001142852229645 0.46595628644544196 1.0 ['nc|ENSG00000120049|Q9NS61-2|KCNIP2', 'ENSG00000120049|ENST00000356640|KCNIP2', 'nc|ENSG00000120049|Q9NS61-6|KCNIP2'] 134216 10208 WRRADGKPIAR True PC9_epitope_Rep5 1324.7476358581598 1324.74598490379 44.254 3 -6.703828163043077 0.4659570005243838 1.0 ['ENSG00000144619|ENST00000418658|CNTN4', 'ENST00000438282.6_1_3:2613181-3030164:+|nuORF', 'ENST00000430505.6_1_3:2613181-3079017:+|nuORF'] 128928 4609 VSTSATQGNGT True PC9_epitope_Rep4 1021.4676169827299 1021.46650993586 24.239 2 -6.720713773103858 0.4659570005243838 1.0 ['LRRC36|p.L211V|1|0.43|ENSG00000159708|chr16:67363643-67363643|C/G|missense_variant'] 92055 10511 RPRSMPAS True PC9_epitope_Rep5 900.4599699348399 900.45886993586 45.418 2 -6.7233309384841355 0.46596260133611606 1.0 ['ENST00000329021.9_1_22:42781096-42793874:-|nuORF'] 4868 10826 ALGAANRGPR True PC9_epitope_Rep5 981.54681079329 981.54570993586 46.63 2 -6.7592259644381025 0.4659633152601386 1.0 ['nc|ENSG00000150281|Q16619-2|CTF1', 'ENSG00000150281|ENST00000279804|CTF1'] 135410 25464 YDRKKVSKAA True PC9_epitope_Rep2 1164.6615061923599 1164.6609749679299 103.63 1 -6.761143404489126 0.4659633152601386 1.0 ['ENSG00000099194|ENST00000370355|SCD'] 96920 5868 SETQHWERR True PC9_epitope_Rep3 1227.5744820931097 1227.5728349037902 27.637 3 -6.766149997030564 0.465969629598557 1.0 ['ENST00000560672.1_1_15:84949646-84950209:+|nuORF'] 33740 23172 GLSARQRREL True PC9_epitope_Rep5 1184.6738022115599 1184.67214490379 94.112 3 -6.770292207595389 0.465969629598557 1.0 ['ENST00000586136.5_1_19:30097284-30104129:+|nuORF', 'ENST00000588551.5_1_19:30097225-30101540:+|nuORF', 'ENSG00000105171|ENST00000585603|POP4'] 78652 10998 PDYPKRED True PC9_epitope_Rep5 1018.47197408718 1018.47086993586 47.292 2 -6.7710353760038045 0.465969629598557 1.0 ['ENST00000406608.2_1_7:5016050-5028783:+|nuORF', 'ENST00000493407.5_1_7:5016050-5024561:+|nuORF', 'nc|ENSG00000011275|Q9NWF9|RNF216', 'ENSG00000011275|ENST00000389902|RNF216'] 38363 23815 HGDTALHA True PC9_epitope_Rep4 820.3827651599601 820.38166993586 100.02 2 -6.773125668196189 0.4659752299254381 1.0 ['nc|ENSG00000204498|Q9UBC1-2|NFKBIL1', 'nc|ENSG00000204498|Q9UBC1-3|NFKBIL1', 'ENSG00000204498|ENST00000376148|NFKBIL1'] 110579 9750 TISKGHKI True PC9_epitope_Rep3 882.52870111766 882.52760993586 42.457 2 -6.846336335385401 0.4660095422849054 1.0 ['ENSG00000165730|ENST00000298596|STOX1'] 81706 15128 PRWKRYRRWMK True PC9_epitope_Rep5 1661.9201380002098 1661.9185049037899 63.195 3 -6.8689323991243825 0.4660095422849054 1.0 ['nc|ENSG00000059769|Q9H1X3-2|DNAJC25', 'ENST00000463589.5_1_9:114405367-114415499:+|nuORF', 'ENSG00000059769|ENST00000313525|DNAJC25'] 138515 10353 YRKMKERL True PC9_epitope_Rep2 1122.6331832695398 1122.6315449037902 45.148 3 -6.875497783821989 0.4660095422849054 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 97975 19530 SHRVEMPRQN True PC9_epitope_Rep5 1252.6094877028397 1252.60838993586 80.174 2 -6.879369187872543 0.4660095422849054 1.0 ['nc|ENSG00000154310|Q9UKE5-8|TNIK', 'nc|ENSG00000154310|Q9UKE5-5|TNIK', 'nc|ENSG00000154310|Q9UKE5-7|TNIK', 'nc|ENSG00000154310|Q9UKE5-3|TNIK', 'nc|ENSG00000154310|Q9UKE5-6|TNIK', 'nc|ENSG00000154310|Q9UKE5-2|TNIK', 'nc|ENSG00000154310|Q9UKE5-4|TNIK', 'ENSG00000154310|ENST00000436636|TNIK'] 37394 5374 GVYKSRAP True PC9_epitope_Rep5 876.4817509252398 876.48064993586 25.684 2 -6.894454012922374 0.4660095422849054 1.0 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF', 'ENST00000405135.5_1_22:50968911-50969740:-|nuORF', 'ENSG00000177989|ENST00000329363|ODF3B', 'ENST00000468249.1_1_22:50968911-50969740:-|nuORF'] 40166 12776 HREWGSHNCYH True PC9_epitope_Rep5 1424.5792502037202 1424.5781499358602 54.152 2 -6.896901978057631 0.4660095422849054 1.0 ['nc|ENSG00000177675|Q9NR16-3|CD163L1', 'nc|ENSG00000177675|Q9NR16-2|CD163L1', 'ENSG00000177675|ENST00000313599|CD163L1', 'nc|ENSG00000177675|Q9NR16-4|CD163L1', 'CD163L1|p.D142Efs*9|1|0.09|ENSG00000177675|chr12:7433393-7433394|-/T|frameshift_variant'] 35078 25555 GRKAGPPP True PC9_epitope_Rep2 778.4449714936999 778.44386993586 103.98 2 -6.904264737706154 0.4660095422849054 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 35079 25366 GRKAGPPP True PC9_epitope_Rep2 778.4449714936999 778.44386993586 103.25 2 -6.9063060741957605 0.4660095422849054 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-4|HNRNPUL1'] 38422 7408 HGRLKGYQ True PC9_epitope_Rep5 957.5144480358499 957.51334993586 33.45 2 -6.9325070808993905 0.4660361134995701 1.0 ['ENSG00000134121|ENST00000256509|CHL1', 'nc|ENSG00000134121|O00533|CHL1'] 119614 14766 VERYVGGDK True PC9_epitope_Rep2 1021.5192586327698 1021.51816993586 62.063 2 -6.934419902688979 0.46603753800985637 1.0 ['ENSG00000006459|ENST00000397560|KDM7A', 'nc|ENSG00000006459|Q6ZMT4-2|KDM7A'] 103981 23291 SRRKSLTP True PC9_epitope_Rep5 943.5563128478299 943.55520993586 94.572 2 -6.939548676402446 0.46603753800985637 1.0 ['nc|ENSG00000099364|Q6PCT2-2|FBXL19', 'nc|ENSG00000099364|Q6PCT2-3|FBXL19', 'ENSG00000099364|ENST00000338343|FBXL19', 'nc|ENSG00000099364|Q6PCT2|FBXL19'] 108277 9655 TEARSCHL True PC9_epitope_Rep5 915.4232500729499 915.42214993586 42.105 2 -6.9440455704248745 0.46603753800985637 1.0 ['nc|ENSG00000012223|P02788-2|LTF', 'ENSG00000012223|ENST00000231751|LTF'] 68353 11758 LTSKLHAAK True PC9_epitope_Rep4 967.58146496651 967.58036993586 52.991 2 -6.96745554622734 0.46603753800985637 1.0 ['CCDC92|p.Q161K|1|0.12|ENSG00000119242|chr12:123937573-123937573|G/T|missense_variant'] 92696 24519 RRHKKLPLTA True PC9_epitope_Rep4 1218.76730867358 1218.7662099358602 102.8 2 -6.9702742072955495 0.46604313680259196 1.0 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17', 'ENST00000575447.1_1_16:24979927-25026645:-|nuORF'] 128186 22369 VRSVRGGGV True PC9_epitope_Rep2 885.5144480358498 885.51334993586 91.533 2 -6.981706624714525 0.46604384888805006 1.0 ['ENST00000566203.6_1_20:33859916-33865902:-|nuORF'] 4879 7521 ALGECCEK True PC9_epitope_Rep2 851.35172492547 851.35062993586 34.297 2 -6.9874213207406415 0.46604384888805006 1.0 ['ENST00000520448.5_1_8:24181385-24209525:+|nuORF', 'nc|ENSG00000042980|Q9UKQ2-2|ADAM28', 'ADAM28|p.Q725Rfs*11|1|0.21|ENSG00000042980|chr8:24351302-24351303|CC/-|frameshift_variant', 'ENSG00000042980|ENST00000265769|ADAM28'] 70592 16090 LYYRRAHRRFV True PC9_epitope_Rep5 1535.85858328947 1535.85637987172 66.878 4 -7.005426106363607 0.46604527296937415 1.0 ['ENSG00000116898|ENST00000373116|MRPS15', 'ENST00000477040.1_1_1:36921391-36921985:-|nuORF', 'ENST00000488606.5_1_1:36921391-36923601:-|nuORF'] 128929 5669 VSTSATQGNGT True PC9_epitope_Rep5 1021.4676169827299 1021.46650993586 26.803 2 -7.017994969810752 0.46604527296937415 1.0 ['LRRC36|p.L211V|1|0.43|ENSG00000159708|chr16:67363643-67363643|C/G|missense_variant'] 10719 19101 CTSRVRQCL True PC9_epitope_Rep2 1064.5219185684 1064.52082993586 78.843 2 -7.019999090382799 0.46604527296937415 1.0 ['L1PA3_dup1321|chr2:173527290-173533317:-|3.228419307734538|0.2637255971055219|3.61|494.0|356|3|anti-sense'] 26650 15025 FLAFLYAL True NCI_RA007_Epitope_Rep4 956.53714054304 956.53604993586 65.308 2 -7.029302562067593 0.46604527296937415 1.0 ['ENSG00000198964|ENST00000361781|SGMS1'] 112760 13496 TPKRFPRQPRR True PC9_epitope_Rep4 1437.8429332253297 1437.84127490379 59.809 3 -7.035224199060016 0.4660508712701042 1.0 ['chrX:152727863-152728074|274|74.52|0.65|6.84|-|1|CSAG1,CSAG1|1', 'ENSG00000198930|ENST00000452779|CSAG1'] 119028 13471 VEGEHERRLD True PC9_epitope_Rep2 1238.6003624877799 1238.59926993586 57.096 2 -7.044167832410986 0.46605646945344364 1.0 ['nc|ENSG00000110274|Q9UPV0-2|CEP164', 'ENSG00000110274|ENST00000278935|CEP164', 'ENST00000533223.1_1_11:117257895-117280842:+|nuORF', 'CEP164|p.E1358Rfs*55|1|0.68|ENSG00000110274|chr11:117409940-117409940|G/-|frameshift_variant'] 122351 15057 VGSARALR True PC9_epitope_Rep4 828.49298431528 828.49188993586 65.847 2 -7.072670075782269 0.46608028347678404 1.0 ['ENST00000327111.7_1_5:92919776-92920418:+|nuORF'] 94239 17416 RWRKRWRWRRY True PC9_epitope_Rep4 1804.0134612214297 1804.01182490379 74.984 3 -7.088280958180788 0.46608028347678404 1.0 ['ENST00000507209.5_1_4:187125362-187125452:+|nuORF'] 100995 8609 SLSYKDRQ True PC9_epitope_Rep5 995.5036085686299 995.50250993586 38.058 2 -7.089512443117261 0.46608028347678404 1.0 ['ENSG00000175664|ENST00000380473|TEX26'] 26651 15103 FLAFLYAL True NCI_RA007_Epitope_Rep4 956.53714054304 956.53604993586 65.657 2 -7.130576960652768 0.46608028347678404 1.0 ['ENSG00000198964|ENST00000361781|SGMS1'] 69238 10084 LVNHQRIHTGE True PC9_epitope_Rep5 1302.6792815148199 1302.67818993586 43.771 2 -7.131711817388648 0.46608028347678404 1.0 ['ENSG00000196267|ENST00000682614|ZNF836'] 16177 16830 EEEWRQRRR True PC9_epitope_Rep3 1343.6806784971498 1343.6795899358601 69.889 2 -7.1488357129324935 0.46608028347678404 1.0 ['ENST00000555166.5_2_14:57857320-57866549:+|nuORF', 'ENST00000554703.1_1_14:57857320-57876115:+|nuORF'] 129120 26466 VTCRRADA True PC9_epitope_Rep4 890.4392344902599 890.43812993586 112.46 2 -7.157643167942949 0.46608028347678404 1.0 ['nc|ENSG00000172053|P47897-2|QARS1', 'ENSG00000172053|ENST00000306125|QARS1', 'ENST00000470113.2_1_3:49135784-49136686:-|nuORF', 'ENST00000497635.5_1_3:49133464-49135940:-|nuORF', 'ENST00000494984.5_1_3:49133464-49135940:-|nuORF'] 97927 9686 SHPNGPGP True PC9_epitope_Rep5 761.34565137525 761.34454993586 42.225 2 -7.158252980516597 0.46608028347678404 1.0 ['ENST00000428826.6_1_17:40852687-40852948:-|nuORF'] 105689 5215 SVGRRCKRICP True PC9_epitope_Rep5 1273.6859642017298 1273.68430490379 25.077 3 -7.165187585721272 0.46608588082358365 1.0 ['ENST00000411689.6_1_6:46620850-46623676:+|nuORF'] 7485 6825 ASDYSKKSNV True PC9_epitope_Rep5 1097.53530261973 1097.5342099358602 31.225 2 -7.200916212661441 0.46611244483116504 1.0 ['ENSG00000146005|ENST00000274710|PSD2'] 8398 11951 ATQATRAACP True PC9_epitope_Rep2 988.4760139217998 988.47490993586 51.292 2 -7.222743978654495 0.4661131553291191 1.0 ['ENST00000240328.3_1_17:59485871-59486309:+|nuORF'] 128051 24864 VRRLKVNE True PC9_epitope_Rep2 1012.6141620771199 1012.61306993586 101.32 2 -7.2421471589509485 0.4661131553291191 1.0 ['HNRNPUL1|p.D610*|1|0.4|ENSG00000105323|chr19:41302801-41302802|-/T|frameshift_variant', 'nc|ENSG00000105323|Q9BUJ2-3|HNRNPUL1', 'nc|ENSG00000105323|Q9BUJ2-2|HNRNPUL1', 'ENSG00000105323|ENST00000392006|HNRNPUL1'] 9072 13063 AVKFKTTHAP True PC9_epitope_Rep2 1098.61857875122 1098.61748993586 55.525 2 -7.2511461790715535 0.4661292351559879 1.0 ['nc|ENSG00000173826|Q9H252-1|KCNH6', 'nc|ENSG00000173826|Q9H252-2|KCNH6', 'ENSG00000173826|ENST00000314672|KCNH6'] 43806 7522 IKKLKRKPP True PC9_epitope_Rep2 1106.76518341526 1106.76408993586 34.301 2 -7.3087283661922955 0.46613065537339093 1.0 ['nc|ENSG00000138684|Q9HBE4-2|IL21', 'ENSG00000138684|ENST00000648588|IL21'] 67781 9446 LTHKTSNLS True PC9_epitope_Rep3 999.5349086969101 999.53380993586 41.276 2 -7.320921508105645 0.46613065537339093 1.0 ['nc|ENSG00000102554|Q13887-3|KLF5'] 124710 20957 VLKGGGGGG True PC9_epitope_Rep2 700.3867879112398 700.38623496793 86.059 1 -7.326974138950307 0.46613065537339093 1.0 ['ENST00000371222.3_1_1:59247375-59247612:-|nuORF', 'ENST00000332783.11_1_15:101142769-101143240:+|nuORF'] 121641 11419 VGLGDSKK True PC9_epitope_Rep4 802.45486747106 802.45376993586 51.692 2 -7.343466455932398 0.46613065537339093 1.0 ['ENST00000563181.1_1_16:2030938-2031410:-|nuORF', 'ENST00000354249.8_2_16:2030177-2031410:-|nuORF', 'ENST00000356120.8_2_16:2030177-2031410:-|nuORF'] 101555 8024 SPASTVEK True PC9_epitope_Rep5 817.41814760917 817.41704993586 35.803 2 -7.385366198531941 0.466167699193895 1.0 ['nc|ENSG00000173610|P0DTE4-4|UGT2A1', 'chr4:69599394-69638899|138|17.34|0.08|7.68|-|ENST00000514019|UGT2A2,UGT2A2', 'chr4:69599394-69646930|175|34.62|0.22|7.32|-|ENST00000512704|UGT2A2,UGT2A1', 'nc|ENSG00000173610|P0DTE4-1|UGT2A1', 'ENSG00000173610|ENST00000286604|UGT2A1'] 10151 4055 CCCCCCSC True PC9_epitope_Rep5 826.10688658094 826.10578993586 20.671 2 -7.418925300132426 0.46619425983773244 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 119705 20066 VETDQRKM True PC9_epitope_Rep2 1005.4913296327699 1005.49022993586 82.589 2 -7.429559607411071 0.4661998553443956 1.0 ['nc|ENSG00000181214|Q6IF36|OR8G2P'] 27280 21656 FLYPFPLAL True NCI_RA007_Epitope_Rep4 1079.60555445603 1079.6044499358602 93.89 2 -7.478641641450959 0.4662222361980231 1.0 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 69444 15416 LVRPRRSAP True PC9_epitope_Rep3 1050.6410455313 1050.6399499358602 64.452 2 -7.4923727558908295 0.4662222361980231 1.0 ['ENSG00000239697|ENST00000293825|TNFSF12', 'nc|ENSG00000239697|O43508-2|TNFSF12'] 39279 12008 HLPHPHPHPP True PC9_epitope_Rep4 1164.5940953388802 1164.59245490379 53.987 3 -7.507251829470367 0.4662222361980231 1.0 ['ENSG00000160469|ENST00000309383|BRSK1', 'nc|ENSG00000160469|Q8TDC3-3|BRSK1'] 112682 25516 TPGAKKGP True PC9_epitope_Rep2 754.4337381036598 754.43264993586 103.83 2 -7.521592805376726 0.4662222361980231 1.0 ['nc|ENSG00000166436|O15016|TRIM66', 'ENSG00000166436|ENST00000646038|TRIM66', 'nc|ENSG00000166436|O15016-2|TRIM66'] 123148 5323 VHEQQMDDNE True PC9_epitope_Rep3 1243.4775300434296 1243.47589490379 25.553 3 -7.555522381369025 0.4662397283246688 1.0 ['ZFX|p.I769Tfs*26|1|0.76|ENSG00000005889|chrX:24211262-24211265|CATT/-|frameshift_variant', 'ENSG00000005889|ENST00000304543|ZFX', 'nc|ENSG00000005889|P17010-3|ZFX', 'nc|ENSG00000005889|P17010-2|ZFX'] 42502 23298 IERKYSRKK True PC9_epitope_Rep3 1206.7196897748197 1206.71858993586 94.896 2 -7.556980181963279 0.4662397283246688 1.0 ['ZNF658|p.S155I|1|0.21|ENSG00000274349|chr9:66918030-66918030|G/T|missense_variant'] 53035 11147 KRTQQEYYERE True PC9_epitope_Rep5 1528.7270195528797 1528.72537490379 47.861 3 -7.56568977115149 0.4662397283246688 1.0 ['nc|ENSG00000111879|Q8NB25-4|FAM184A', 'nc|ENSG00000111879|Q8NB25-2|FAM184A', 'nc|ENSG00000111879|Q8NB25-3|FAM184A', 'ENSG00000111879|ENST00000338891|FAM184A'] 79655 13908 PHHPNPPP True PC9_epitope_Rep5 891.4351350859899 891.4340299358599 58.517 2 -7.573906823593557 0.4662397283246688 1.0 ['nc|ENSG00000157168|Q02297-12|NRG1', 'nc|ENSG00000157168|Q02297-3|NRG1', 'nc|ENSG00000157168|Q02297-11|NRG1', 'nc|ENSG00000157168|Q02297-7|NRG1', 'ENSG00000157168|ENST00000405005|NRG1', 'nc|ENSG00000157168|Q02297-6|NRG1', 'nc|ENSG00000157168|Q02297-2|NRG1'] 43389 25390 IHRNKRKVF True PC9_epitope_Rep5 1196.7254438615998 1196.7243499358601 102.89 2 -7.576681392335363 0.4662397283246688 1.0 ['nc|ENSG00000003137|Q9NR63-3|CYP26B1', 'ENSG00000003137|ENST00000001146|CYP26B1'] 91892 23566 RPPGGGGG True PC9_epitope_Rep5 653.32452200785 653.3239749679301 95.631 1 -7.581101361125084 0.4662453227682923 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 57368 9114 LEHGDEEP True PC9_epitope_Rep2 924.3824903764399 924.3813899358599 40.397 2 -7.5953336964573355 0.4662613981762918 1.0 ['XAGE3|p.P29H|2|0.18|ENSG00000171402|chrX:52866534-52866534|G/T|missense_variant'] 15523 7316 EARNASPRV True PC9_epitope_Rep5 998.5257409955399 998.52464993586 33.102 2 -7.633719323247092 0.4662774732473195 1.0 ['ENST00000508458.2_1_5:41870176-41871044:+|nuORF'] 16677 19513 EETRGARKGYP True PC9_epitope_Rep5 1262.6367479964997 1262.63564993586 80.11 2 -7.6428439745773336 0.4662942545119165 1.0 ['nc|ENSG00000112175|P22003-2|BMP5', 'ENSG00000112175|ENST00000370830|BMP5'] 11901 6499 DHRPAHPA True PC9_epitope_Rep4 899.4361977151499 899.4351099358599 32.119 2 -7.648151358801953 0.4662942545119165 1.0 ['ASB2|p.H95Afs*108|1|0.15|ENSG00000100628|chr14:93954369-93954370|-/A|frameshift_variant'] 63221 22821 LNWWRRRKAR True PC9_epitope_Rep2 1440.8327028948 1440.8316099358601 93.269 2 -7.64868796364957 0.4662942545119165 1.0 ['ENSG00000171714|ENST00000324559|ANO5', 'ANO5|p.L845*|1|0.27|ENSG00000171714|chr11:22279553-22279553|T/-|frameshift_variant'] 60830 13705 LKKLETRE True PC9_epitope_Rep5 1015.60259433391 1015.6020749679301 57.743 1 -7.6768782101280815 0.46631032856469107 1.0 ['nc|ENSG00000137831|Q9BZF9-2|UACA', 'ENSG00000137831|ENST00000322954|UACA'] 89816 5695 RFHPSLRSTRR True PC9_epitope_Rep5 1411.7908976524698 1411.78924490379 26.901 3 -7.683182115374912 0.46631592185796933 1.0 ['nc|ENSG00000111641|P46087-3|NOP2', 'nc|ENSG00000111641|P46087-2|NOP2', 'ENSG00000111641|ENST00000322166|NOP2', 'nc|ENSG00000111641|P46087-4|NOP2'] 121158 7383 VGGGYTAK True PC9_epitope_Rep2 751.3864535580699 751.38534993586 33.779 2 -7.7013970398789935 0.46631662788991596 1.0 ['nc|ENSG00000198836|O60313-13|OPA1', 'nc|ENSG00000198836|O60313|OPA1', 'nc|ENSG00000198836|O60313-9|OPA1', 'nc|ENSG00000198836|O60313-11|OPA1', 'nc|ENSG00000198836|O60313-2|OPA1', 'ENSG00000198836|ENST00000361510|OPA1', 'OPA1|p.E574Dfs*11|1|0.21|ENSG00000198836|chr3:193645768-193645769|AG/T|frameshift_variant', 'ENST00000487986.1_1_3:193332581-193346300:+|nuORF'] 89760 24998 RFALKRKRSR True PC9_epitope_Rep5 1316.8265548851998 1316.8254499358602 101.31 2 -7.701906952677525 0.46631662788991596 1.0 ['ENST00000555952.5_1_14:52037074-52045767:+|nuORF'] 54932 21117 LAGSSRLRH True PC9_epitope_Rep4 995.5624608574301 995.56136993586 89.389 2 -7.725136039642129 0.4663278138754978 1.0 ['ENST00000505306.5_1_17:48166637-48166859:+|nuORF'] 41402 11065 IARHYRVP True PC9_epitope_Rep2 1010.5773826455799 1010.57628993586 47.879 2 -7.745313987913702 0.4663278138754978 1.0 ['ENSG00000183690|ENST00000420999|EFHC2', 'nc|ENSG00000183690|Q5JST6-2|EFHC2', 'ENST00000343571.3_1_X:44008043-44084947:-|nuORF'] 100719 15098 SLRGRRTWVR True PC9_epitope_Rep5 1285.7479702113299 1285.74686993586 63.082 2 -7.758582750131537 0.46632851962859717 1.0 ['ENST00000313146.10_1_1:156697789-156698104:-|nuORF'] 135130 24228 YAQERPDH True PC9_epitope_Rep4 1014.4519073489398 1014.45080993586 101.67 2 -7.762986905346598 0.46632851962859717 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'nc|ENSG00000141837|O00555-3|CACNA1A', 'nc|ENSG00000141837|O00555-4|CACNA1A'] 122310 6522 VGRVGKNA True PC9_epitope_Rep5 799.46643521427 799.46532993586 30.059 2 -7.785147675064259 0.4663467080237664 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 126721 21107 VPRRAAAA True PC9_epitope_Rep4 810.4824196315798 810.48187496793 89.35 1 -7.805739100941284 0.4663467080237664 1.0 ['ENST00000594019.5_1_19:47570396-47593253:-|nuORF'] 122309 6311 VGRVGKNA True PC9_epitope_Rep5 799.46643521427 799.46532993586 29.249 2 -7.812787931762981 0.4663467080237664 1.0 ['ENST00000504307.1_2_17:48249464-48258440:-|nuORF'] 79436 9522 PGPHGPNG True PC9_epitope_Rep5 731.33508669155 731.33453496793 41.586 1 -7.813288893362644 0.4663467080237664 1.0 ['ENSG00000204262|ENST00000374866|COL5A2'] 128272 23666 VSALRQELRRR True PC9_epitope_Rep2 1382.8218634275797 1382.82022490379 96.505 3 -7.815366820461885 0.4663467080237664 1.0 ['ENSG00000130589|ENST00000467148|HELZ2', 'nc|ENSG00000130589|Q9BYK8|HELZ2', 'nc|ENSG00000130589|Q9BYK8-2|HELZ2'] 59999 25476 LHQKITAT True PC9_epitope_Rep5 910.52361573722 910.52250993586 103.24 2 -7.845403592266761 0.4663467080237664 1.0 ['ENSG00000187775|ENST00000389840|DNAH17', 'chr17:78479116-78479485|309|10.05|0.51|4.29|-|2|DNAH17,DNAH17|1', 'ENST00000586052.5_1_17:76475094-76487566:-|nuORF'] 121028 18438 VGFFILLRIF True NCI_RA007_Epitope_Rep3 1223.74305098835 1223.7424749679299 80.707 1 -7.863170432165572 0.4663467080237664 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'ABCC12|p.H970N|1|0.3|ENSG00000140798|chr16:48101002-48101002|G/T|missense_variant'] 136187 7808 YGKNYSQR True PC9_epitope_Rep5 1014.4882928576599 1014.48718993586 34.978 2 -7.866243934513266 0.46635230011526774 1.0 ['ENSG00000183318|ENST00000689094|SPDYE4'] 22431 14048 ETFRRWHQKRR True PC9_epitope_Rep3 1598.8654595750597 1598.8638149037902 59.125 3 -7.883567934517782 0.46635789208957257 1.0 ['ENST00000467796.5_1_22:51221718-51237143:+|nuORF', 'ENST00000480246.1_1_22:51222460-51237143:+|nuORF'] 16124 6736 EEEEERRYYRR True PC9_epitope_Rep5 1613.7546312830498 1613.75241987172 30.881 4 -7.925209731953716 0.4663851457551816 1.0 ['ENSG00000110057|ENST00000227471|UNC93B1', 'ENST00000530138.3_1_11:67766987-67771573:-|nuORF', 'ENST00000533424.5_1_11:67770773-67771486:-|nuORF'] 4462 6812 AKELSAVHSSH True PC9_epitope_Rep5 1164.58873517492 1164.5876299358601 31.173 2 -7.9412877950355085 0.4663851457551816 1.0 ['ENSG00000165490|ENST00000533655|DDIAS'] 109338 5934 TGHPPGPT True PC9_epitope_Rep5 762.36605246666 762.36494993586 27.82 2 -7.95486835766496 0.4663851457551816 1.0 ['nc|ENSG00000120049|Q9NS61-2|KCNIP2', 'ENSG00000120049|ENST00000356640|KCNIP2', 'nc|ENSG00000120049|Q9NS61-6|KCNIP2'] 53179 11304 KSTLTKHLR True PC9_epitope_Rep5 1082.6560268890998 1082.65492993586 48.473 2 -7.979993034233814 0.46640121548698066 1.0 ['ENSG00000075407|ENST00000685332|ZNF37A', 'ENST00000452075.7_1_10:43015418-43015709:-|nuORF'] 27281 21673 FLYPFPLAL True NCI_RA007_Epitope_Rep4 1079.60555445603 1079.60497496793 93.962 1 -8.050630403598547 0.46640680665576933 1.0 ['ENSG00000166471|ENST00000528080|TMEM41B', 'ENST00000524543.5_1_11:9304973-9316821:-|nuORF'] 39764 13722 HQAAPPAD True PC9_epitope_Rep5 805.37186612309 805.3713149679301 57.808 1 -8.105884280605844 0.46641380538762167 1.0 ['ENST00000219476.7_1_16:2138283-2138505:+|nuORF'] 329 10646 AAIKGNQESVK True PC9_epitope_Rep5 1143.62478633047 1143.62368993586 45.937 2 -8.106257360533492 0.46641380538762167 1.0 ['nc|ENSG00000129493|Q86XA9-2|HEATR5A', 'nc|ENSG00000129493|Q86XA9|HEATR5A', 'ENSG00000129493|ENST00000543095|HEATR5A', 'ENST00000551414.1_1_14:31762513-31765297:-|nuORF'] 122639 21321 VGTNGGLK True PC9_epitope_Rep2 744.41300265908 744.4124549679301 87.475 1 -8.113555780613915 0.46641380538762167 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 121030 23312 VGFFILLRIF True PC9_epitope_Rep2 1223.74305098835 1223.7424749679299 95.145 1 -8.114722495433277 0.46641380538762167 1.0 ['nc|ENSG00000140798|Q96J65|ABCC12', 'ENSG00000140798|ENST00000311303|ABCC12', 'nc|ENSG00000140798|Q96J65-2|ABCC12', 'nc|ENSG00000140798|Q96J65-5|ABCC12', 'ABCC12|p.H970N|1|0.3|ENSG00000140798|chr16:48101002-48101002|G/T|missense_variant'] 97521 24098 SGRPGPRL True PC9_epitope_Rep2 838.47733425114 838.47622993586 98.193 2 -8.137804330262927 0.46641380538762167 1.0 ['ENST00000441869.5_1_11:46402650-46402776:+|nuORF'] 112002 10117 TLSQQQKSP True PC9_epitope_Rep2 1015.52982331647 1015.52872993586 44.253 2 -8.176614039296984 0.46641873133937456 1.0 ['ENST00000468472.1_1_3:52853923-52864679:-|nuORF', 'nc|ENSG00000055955|Q14624-4|ITIH4', 'nc|ENSG00000055955|Q14624-3|ITIH4', 'nc|ENSG00000055955|Q14624-2|ITIH4', 'ENSG00000055955|ENST00000266041|ITIH4'] 81590 23366 PRLPRSTT True PC9_epitope_Rep2 926.5297637468201 926.52866993586 95.351 2 -8.19679615535035 0.46641873133937456 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 121148 22341 VGGGQGQP True PC9_epitope_Rep2 698.33475233838 698.3342049679301 91.421 1 -8.22580908258405 0.46641873133937456 1.0 ['nc|ENSG00000132677|Q9H310-3|RHBG'] 44465 9254 INNVKGKG True PC9_epitope_Rep3 828.4817509252399 828.48064993586 40.541 2 -8.25152359996949 0.46641873133937456 1.0 ['ADCY2|p.I1063N|1|0.26|ENSG00000078295|chr5:7826783-7826783|T/A|missense_variant'] 35843 19644 GVAAAGHA True PC9_epitope_Rep5 652.3292730351201 652.32872496793 80.615 1 -8.252967945173571 0.46641873133937456 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 35842 18953 GVAAAGHA True PC9_epitope_Rep4 652.3292730351201 652.32872496793 80.99 1 -8.265208752011604 0.46641873133937456 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 130950 19755 VVIQRSQRKC True PC9_epitope_Rep5 1215.6870097475498 1215.68590993586 81.033 2 -8.267258227484923 0.46641873133937456 1.0 ['ENST00000546469.5_3_21:30677551-30693608:+|nuORF'] 52544 25070 KPRPERFQN True PC9_epitope_Rep5 1170.6257893899797 1170.62468993586 101.57 2 -8.281449118344735 0.46641873133937456 1.0 ['ENST00000378725.3_1_1:1480120-1509937:-|nuORF', 'ENSG00000160075|ENST00000291386|SSU72', 'ENST00000378726.1_1_1:1477448-1480390:-|nuORF'] 85343 15356 QLDGKKKKP True PC9_epitope_Rep3 1040.6342288153598 1040.63312993586 64.223 2 -8.292102559987542 0.46641873133937456 1.0 ['nc|ENSG00000134982|P25054-2|APC', 'nc|ENSG00000134982|P25054-3|APC', 'ENSG00000134982|ENST00000257430|APC'] 107485 6120 TAAGEKLKS True PC9_epitope_Rep5 903.50254593947 903.50144993586 28.526 2 -8.294246346064966 0.46641873133937456 1.0 ['ENSG00000203989|ENST00000371402|RHOXF2B', 'ENSG00000131721|ENST00000371388|RHOXF2'] 60754 12770 LKEFKRNDHDD True PC9_epitope_Rep5 1415.67934108447 1415.67769490379 54.129 3 -8.307548144900647 0.46641873133937456 1.0 ['GTF3C1|p.E1848Rfs*33|1|0.16|ENSG00000077235|chr16:27464651-27464651|G/-|frameshift_variant', 'nc|ENSG00000077235|Q12789-3|GTF3C1', 'ENSG00000077235|ENST00000356183|GTF3C1', 'GTF3C1|p.F416Rfs*49|1|0.12|ENSG00000077235|chr16:27507140-27507153|TCGTCTTCCATGAA/-|frameshift_variant'] 9889 11264 AYNHRTDL True PC9_epitope_Rep2 988.47264279352 988.47154993586 48.654 2 -8.35686912535988 0.46641873133937456 1.0 ['nc|ENSG00000158859|O75173-2|ADAMTS4', 'ENSG00000158859|ENST00000367996|ADAMTS4'] 84434 11932 QGIKGKVG True PC9_epitope_Rep5 785.4759372688098 785.47484993586 50.894 2 -8.360355117211006 0.46641873133937456 1.0 ['COL4A4|p.G885Rfs*12|1|0.36|ENSG00000081052|chr2:227056008-227056009|-/T|frameshift_variant', 'ENSG00000081052|ENST00000396625|COL4A4'] 128017 21950 VRRAPAVS True PC9_epitope_Rep5 854.50863437942 854.50752993586 89.472 2 -8.38333178875354 0.46641873133937456 1.0 ['ENST00000264235.12_2_3:119812650-119812956:-|nuORF'] 35110 20655 GRRRWSAL True PC9_epitope_Rep2 1000.5678805910399 1000.56678993586 84.886 2 -8.409899264621005 0.4664347971840429 1.0 ['ENST00000383721.8_1_3:52802453-52802501:-|nuORF'] 86125 24640 QPRALAKNPH True PC9_epitope_Rep5 1130.63087477042 1130.6297699358602 99.903 2 -8.445908371318147 0.46646133861319755 1.0 ['NTRK3|p.F123L|1|0.11|ENSG00000140538|chr15:88183444-88183444|A/C|missense_variant'] 137830 19115 YPFVPVFF True NCI_RA007_Epitope_Rep4 1014.5214904788999 1014.52038993586 82.673 2 -8.519877344137685 0.4664941703941924 1.0 ['chr6:168585980-168598818|151|82.08|0.04|10.94|+|2|TE_info:L1ME2z,L1ME2z_dup2627,L1,LINE,donor,-,168585259,168585980|None,SMOC2|1'] 106184 18862 SVPEKGKHGI True PC9_epitope_Rep5 1050.5821932425 1050.58108993586 77.57 2 -8.524466963936131 0.4664941703941924 1.0 ['nc|nan|F2Z3F1|C5orf67'] 36795 8852 GVPLMFII True NCI_RA007_Epitope_Rep4 888.51429692348 888.5131899358599 40.866 2 -8.531273399360355 0.4664941703941924 1.0 ['ENSG00000147679|ENST00000309822|UTP23'] 137779 5251 YNYHRQKERTV True PC9_epitope_Rep3 1492.7535090842398 1492.7518649037902 25.277 3 -8.54051138873802 0.4664941703941924 1.0 ['nc|ENSG00000120509|Q5EBL8-2|PDZD11', 'ENSG00000120509|ENST00000239666|PDZD11'] 90719 8265 RKPEGSPV True PC9_epitope_Rep5 868.4766655447999 868.47556993586 36.732 2 -8.586216160977425 0.46650046090672925 1.0 ['ENSG00000177084|ENST00000320574|POLE', 'ENST00000537064.5_1_12:133235217-133253139:-|nuORF'] 80806 10483 PLSYKHDTK True PC9_epitope_Rep4 1087.56620882519 1087.5651099358602 48.039 2 -8.606034608489262 0.46650046090672925 1.0 ['ENSG00000174231|ENST00000304992|PRPF8'] 32437 21011 GGGYGGQS True PC9_epitope_Rep5 681.2718177286499 681.27126496793 85.876 1 -8.680409943022726 0.46650046090672925 1.0 ['ENSG00000169045|ENST00000393432|HNRNPH1', 'ENSG00000126945|ENST00000316594|HNRNPH2', 'ENST00000515481.5_1_5:179043097-179043181:-|nuORF', 'ENST00000502632.5_1_5:179042549-179043984:-|nuORF'] 85993 6614 QPHVRPQP True PC9_epitope_Rep2 957.5144480358499 957.51334993586 30.851 2 -8.692089075499542 0.46650604933745354 1.0 ['nc|ENSG00000088827|Q9BZZ2-3|SIGLEC1'] 112680 13020 TPGAAQESSND True PC9_epitope_Rep5 1075.44179615771 1075.44068993586 55.086 2 -8.713149490333604 0.46653258751806925 1.0 ['ENSG00000187987|ENST00000289788|ZSCAN23'] 58490 21875 LEYQRRQVREP True PC9_epitope_Rep3 1472.78480921252 1472.78370993586 89.445 2 -8.73285590304289 0.46658007479024166 1.0 ['nc|ENSG00000146122|Q86T65-4|DAAM2', 'ENSG00000146122|ENST00000274867|DAAM2'] 10150 3959 CCCCCCSC True PC9_epitope_Rep5 826.10688658094 826.10578993586 20.305 2 -8.744109902695536 0.46658147500288044 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 33686 10149 GLPRKRDRKY True PC9_epitope_Rep5 1287.75238688543 1287.75073490379 44.025 3 -8.751462652950423 0.46658147500288044 1.0 ['nc|ENSG00000187801|Q9UJL9-2|ZFP69B', 'ENSG00000187801|ENST00000361584|ZFP69B'] 119921 12139 VEWWGLVIL True PC9_epitope_Rep2 1113.62226714933 1113.62116993586 52.003 2 -8.75402412615003 0.46658147500288044 1.0 ['ENST00000486831.5_1_3:138189538-138191915:+|nuORF'] 123740 21134 VIRGGATR True PC9_epitope_Rep3 828.49298431528 828.49188993586 86.577 2 -8.756342885781613 0.46658147500288044 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 33442 6837 GLGKKCPA True PC9_epitope_Rep5 772.4265445482399 772.42544993586 31.27 2 -8.819033033808854 0.46659753645047763 1.0 ['nc|ENSG00000141837|O00555-5|CACNA1A', 'nc|ENSG00000141837|O00555-2|CACNA1A', 'nc|ENSG00000141837|O00555-6|CACNA1A', 'ENSG00000141837|ENST00000360228|CACNA1A', 'ENSG00000148408|ENST00000371372|CACNA1B', 'nc|ENSG00000148408|Q00975-2|CACNA1B'] 87954 12292 QVQRRKKV True PC9_epitope_Rep4 1040.6566955954397 1040.65558993586 55.096 2 -8.861702481258458 0.4666031233961434 1.0 ['ENST00000473131.5_1_20:5924535-5931132:-|nuORF', 'TRMT6|p.L275Ffs*10|1|0.1|ENSG00000089195|chr20:5942625-5942629|AAGAT/-|frameshift_variant', 'nc|ENSG00000089195|Q9UJA5-3|TRMT6', 'nc|ENSG00000089195|Q9UJA5-2|TRMT6', 'ENSG00000089195|ENST00000203001|TRMT6'] 36955 23537 GVRGSGSG True PC9_epitope_Rep5 675.33000131111 675.32945496793 95.52 1 -8.88752804299913 0.4666191842805371 1.0 ['ENST00000436944.5_1_7:73098152-73100976:+|nuORF'] 112226 16832 TLWRRNAE True PC9_epitope_Rep2 1044.5464764401197 1044.5453699358602 69.993 2 -8.923954359020026 0.4666233793435687 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6'] 83387 10138 QASGGGYH True PC9_epitope_Rep3 775.3249159306702 775.32380993586 43.948 2 -8.983891651347601 0.4666233793435687 1.0 ['chr10:97431135-97432367|141|15.12|0.83|4.19|+|1|PGAM1,None|1'] 13485 4856 DPEACDKETGR True PC9_epitope_Rep5 1219.51391555215 1219.51280993586 23.72 2 -8.988948594502585 0.4666233793435687 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'LAMB1|p.Q1102Sfs*87|1|0.12|ENSG00000091136|chr7:107951314-107951314|C/-|frameshift_variant'] 79960 21380 PISVKEQHKR True PC9_epitope_Rep4 1220.69895433024 1220.6978499358602 90.407 2 -9.000928334984845 0.4666233793435687 1.0 ['ENSG00000186416|ENST00000688521|NKRF', 'nc|ENSG00000186416|O15226|NKRF', 'nc|ENSG00000186416|O15226-2|NKRF'] 129782 22642 VTKRTRSL True PC9_epitope_Rep2 959.5876129761099 959.58650993586 92.587 2 -9.00454417980421 0.4666233793435687 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 83431 17031 QCSDCRPRVT True PC9_epitope_Rep3 1163.51756146395 1163.5164699358602 70.666 2 -9.048192709634893 0.4666233793435687 1.0 ['ENST00000357115.7_2_4:151935804-151936634:-|nuORF'] 57291 22533 LEGIKVGHERK True PC9_epitope_Rep2 1264.7251690780797 1264.7240699358601 92.163 2 -9.053819315660826 0.4666233793435687 1.0 ['ENSG00000178467|ENST00000383729|P4HTM', 'nc|ENSG00000178467|Q9NXG6-3|P4HTM', 'nc|ENSG00000178467|Q9NXG6-2|P4HTM', 'ENST00000472301.5_1_3:49027419-49042675:+|nuORF'] 28130 25588 FRIRAKNT True PC9_epitope_Rep2 1004.5879473292799 1004.58737496793 104.11 1 -9.07493432157388 0.4666233793435687 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-9|TTN', 'nc|ENSG00000155657|Q8WZ42-3|TTN', 'nc|ENSG00000155657|Q8WZ42-10|TTN'] 133635 25045 WKKKKKKKK True PC9_epitope_Rep3 1228.8495817455598 1228.84848993586 101.68 2 -9.145132204445206 0.4666233793435687 1.0 ['ENST00000433510.2_1_17:46713876-46724046:-|nuORF'] 113444 7444 TQNRTPHSVC True PC9_epitope_Rep4 1141.52984039981 1141.52874993586 35.985 2 -9.214647432707446 0.4666233793435687 1.0 ['ENST00000542297.1_1_12:1022559-1023348:-|nuORF', 'ENST00000228345.9_1_12:1022559-1036092:-|nuORF', 'ENSG00000002016|ENST00000358495|RAD52'] 16613 11838 EERTRVST True PC9_epitope_Rep3 976.4937721609199 976.49266993586 50.554 2 -9.232173758540021 0.4666233793435687 1.0 ['ENSG00000102543|ENST00000251108|CDADC1', 'nc|ENSG00000102543|Q9BWV3-2|CDADC1', 'ENST00000466868.1_1_13:49822131-49841632:+|nuORF', 'nc|ENSG00000102543|Q9BWV3-3|CDADC1'] 126753 14571 VPSEVERSK True PC9_epitope_Rep5 1029.5454733806098 1029.54487496793 61.046 1 -9.258897285391596 0.4666233793435687 1.0 68403 7719 LTTASATR True PC9_epitope_Rep2 819.44503106335 819.44392993586 35.068 2 -9.309796641502205 0.4666918009781436 1.0 ['chr19:57435593-57518081|321|13.18|0.0|20.33|+|2|TE_info:LTR3B,LTR3B_dup78,ERVK,LTR,acceptor,+,57518081,57518488|ZNF749,None|3'] 36520 23390 GVKLIKQRHE True PC9_epitope_Rep3 1206.7196897748202 1206.71858993586 95.251 2 -9.329509089432593 0.4666931962174446 1.0 ['nc|ENSG00000197748|Q8NDM7-2|CFAP43', 'ENSG00000197748|ENST00000357060|CFAP43'] 66098 9516 LSNPKGTCE True PC9_epitope_Rep2 947.43823143075 947.43712993586 41.95 2 -9.348214645101661 0.4666931962174446 1.0 ['SLC39A4|p.E108K|1|0.19|ENSG00000147804|chr8:144415962-144415962|C/T|missense_variant'] 64990 18625 LSDFKKHRAAR True PC9_epitope_Rep4 1327.74730150499 1327.7456549037902 79.718 3 -9.369665893788033 0.4666931962174446 1.0 ['ENSG00000131381|ENST00000253699|RBSN', 'nc|ENSG00000289750|Q9H1K0-2|RBSN', 'ENST00000449964.6_1_3:15122283-15137627:-|nuORF'] 103792 24188 SRGAKRLGT True PC9_epitope_Rep2 944.5515618205599 944.55046993586 98.565 2 -9.386291542509122 0.4666931962174446 1.0 ['ENST00000303115.7_1_5:35879366-35879588:+|nuORF'] 129781 22490 VTKRTRSL True PC9_epitope_Rep2 959.5876129761099 959.58650993586 91.997 2 -9.414693857945279 0.4667043657650299 1.0 ['ENST00000372791.7_2_9:131255031-131255067:+|nuORF'] 53289 25268 KTKRKSVLAT True PC9_epitope_Rep2 1130.7135417652198 1130.7124499358601 102.86 2 -9.418088393562996 0.4667043657650299 1.0 ['ENSG00000181291|ENST00000631683|TMEM132E'] 139999 19092 YVKRHQGV True PC9_epitope_Rep4 985.5457481641298 985.54464993586 81.528 2 -9.421847641115798 0.4667050630923085 1.0 ['ENSG00000129467|ENST00000418030|ADCY4', 'ENST00000554674.1_1_14:24799917-24801775:-|nuORF'] 133609 19596 WIPYVLVLPPV True NCI_RA007_Epitope_Rep4 1294.76893138302 1294.7678299358602 84.679 2 -9.433740288661564 0.4667050630923085 1.0 ['ENST00000466602.1_1_2:219677084-219677513:+|nuORF'] 138514 10249 YRKMKERL True PC9_epitope_Rep2 1122.6331832695398 1122.6315449037902 44.756 3 -9.540197057500917 0.4667385681825321 1.0 ['ENSG00000105618|ENST00000321030|PRPF31', 'nc|ENSG00000105618|Q8WWY3-4|PRPF31', 'ENST00000466404.5_1_19:54631491-54634750:+|nuORF'] 94735 7627 RYLKYRTK True PC9_epitope_Rep3 1126.66111226954 1126.65946490379 34.334 3 -9.597484315136127 0.4667385681825321 1.0 ['ENSG00000196639|ENST00000431010|HRH1'] 10549 5935 CPTGCGCH True PC9_epitope_Rep5 776.2404006546801 776.23985496793 27.824 1 -9.603900959689659 0.4667385681825321 1.0 ['nc|ENSG00000103091|Q6PJI9-4|WDR59', 'nc|ENSG00000103091|Q6PJI9-3|WDR59', 'ENSG00000103091|ENST00000262144|WDR59'] 10730 9442 CVLMAWALYL True NCI_RA007_Epitope_Rep4 1181.59770927761 1181.59606490379 43.177 3 -9.606118079264583 0.4667385681825321 1.0 ['nc|ENSG00000132185|Q7L513-4|FCRLA', 'nc|ENSG00000132185|Q7L513-11|FCRLA', 'nc|ENSG00000132185|Q7L513-5|FCRLA', 'nc|ENSG00000132185|Q7L513-14|FCRLA', 'nc|ENSG00000132185|Q7L513-3|FCRLA', 'nc|ENSG00000132185|Q7L513-12|FCRLA', 'ENSG00000132185|ENST00000236938|FCRLA', 'nc|ENSG00000132185|Q7L513-2|FCRLA', 'nc|ENSG00000132185|Q7L513-9|FCRLA', 'nc|ENSG00000132185|Q7L513-10|FCRLA', 'nc|ENSG00000132185|Q7L513-7|FCRLA', 'nc|ENSG00000132185|Q7L513-15|FCRLA', 'nc|ENSG00000132185|Q7L513-6|FCRLA', 'nc|ENSG00000132185|Q7L513-13|FCRLA', 'nc|ENSG00000132185|Q7L513-8|FCRLA'] 120606 22087 VGAGHGAG True PC9_epitope_Rep4 624.29797290684 624.29742496793 93.174 1 -9.651259033836926 0.4667385681825321 1.0 ['ENSG00000127526|ENST00000595753|SLC35E1'] 92810 25361 RRLKHFPR True PC9_epitope_Rep3 1108.67301436592 1108.67247496793 102.97 1 -9.66953361763071 0.4667385681825321 1.0 ['ENSG00000077454|ENST00000310300|LRCH4', 'ENST00000485583.1_1_7:100179936-100183723:-|nuORF'] 74578 9219 NLDKERAV True PC9_epitope_Rep5 943.5086939490699 943.50758993586 40.406 2 -9.685800258542493 0.4667497356103997 1.0 ['nc|ENSG00000005483|Q8IZD2-7|KMT2E', 'ENSG00000005483|ENST00000311117|KMT2E', 'nc|ENSG00000005483|Q8IZD2-2|KMT2E', 'KMT2E|p.K961Efs*5|1|0.17|ENSG00000005483|chr7:105107198-105107199|AA/-|frameshift_variant', 'KMT2E|p.V1121Gfs*7|1|0.12|ENSG00000005483|chr7:105107819-105107850|TGTTTTGTACTTCCGAAGATGGGCTTGTATCT/-|frameshift_variant', 'nc|ENSG00000005483|Q8IZD2-8|KMT2E', 'nc|ENSG00000005483|Q8IZD2-5|KMT2E', 'nc|ENSG00000005483|Q8IZD2-3|KMT2E', 'nc|ENSG00000005483|Q8IZD2-4|KMT2E', 'nc|ENSG00000005483|Q8IZD2-6|KMT2E'] 124202 9068 VLAKEQND True PC9_epitope_Rep4 915.4661604307499 915.46506993586 42.461 2 -9.689731780936455 0.4667497356103997 1.0 ['ENST00000272133.3_1_1:224927365-224927635:+|nuORF'] 15003 24451 DYVPPELITLF True PC9_epitope_Rep2 1305.6856552515299 1305.68454993586 99.626 2 -9.692514147103374 0.4667511281895568 1.0 ['ENSG00000119718|ENST00000266126|EIF2B2', 'ENST00000556668.1_1_14:75473249-75475888:+|nuORF'] 131385 23740 VVSRAAES True PC9_epitope_Rep2 817.4293809992099 817.42828993586 96.787 2 -9.728919743326347 0.4667511281895568 1.0 ['ENST00000496198.1_1_11:132202560-132205037:+|nuORF'] 128231 20586 VRVRGSGV True PC9_epitope_Rep4 828.4929843152798 828.49188993586 87.336 2 -9.737796630068297 0.4667511281895568 1.0 ['ENST00000489724.1_1_3:9932336-9934543:+|nuORF', 'ENST00000307768.4_1_3:9932249-9934613:+|nuORF'] 109384 9502 TGLSEKHP True PC9_epitope_Rep3 867.4450310633499 867.44392993586 41.498 2 -9.744977362203658 0.4667511281895568 1.0 ['ENSG00000140943|ENST00000343411|MBTPS1'] 5633 4981 APAEQFRGSKR True PC9_epitope_Rep2 1245.65781779425 1245.65617490379 24.529 3 -9.806780056341657 0.46678043469157 1.0 ['ENSG00000111752|ENST00000544916|PHC1'] 8909 24526 AVGHHISE True PC9_epitope_Rep3 848.4140652882401 848.41296993586 99.683 2 -9.836386478821806 0.46678043469157 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 117300 22004 VAAEKAIK True PC9_epitope_Rep4 828.5069030439199 828.50580993586 92.859 2 -9.8926310702872 0.46678043469157 1.0 ['ENSG00000091136|ENST00000222399|LAMB1', 'ENST00000472714.1_1_7:107564398-107569844:-|nuORF'] 17745 8253 EHTKLRSAP True PC9_epitope_Rep3 1037.5617921510898 1037.5606899358602 36.721 2 -9.911745647168116 0.46678043469157 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'nc|ENSG00000155657|Q8WZ42-5|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant', 'TTN|p.R9199Lfs*8|1|0.33|ENSG00000155657|chr2:178709772-178709772|C/-|frameshift_variant', 'TTN|p.T8787Nfs*17|1|0.16|ENSG00000155657|chr2:178712714-178712715|-/T|frameshift_variant', 'TTN|p.A8173Pfs*15|1|0.25|ENSG00000155657|chr2:178717266-178717266|C/-|frameshift_variant'] 138608 25356 YRQRRKLIA True PC9_epitope_Rep2 1202.7360085453 1202.73490993586 103.21 2 -9.925164294227107 0.46678043469157 1.0 ['ENST00000469226.1_1_11:2189094-2189913:-|nuORF', 'ENST00000381168.7_1_11:2187868-2190906:-|nuORF', 'nc|ENSG00000180176|P07101-6|TH', 'nc|ENSG00000180176|P07101-5|TH', 'ENSG00000180176|ENST00000352909|TH', 'nc|ENSG00000180176|P07101-4|TH', 'nc|ENSG00000180176|P07101-2|TH', 'nc|ENSG00000180176|P07101|TH'] 41770 10084 IDQKHREI True PC9_epitope_Rep3 1037.5617921510898 1037.5606899358602 43.742 2 -9.92844163637502 0.46678043469157 1.0 ['ENSG00000205413|ENST00000379958|SAMD9'] 103972 22127 SRRGPGVP True PC9_epitope_Rep2 824.4616841869998 824.4611349679301 90.589 1 -9.958945345301503 0.46678043469157 1.0 ['ENSG00000135441|ENST00000548925|BLOC1S1'] 22656 18964 ETSCDDTA True PC9_epitope_Rep2 840.2807277298399 840.27962993586 78.308 2 -9.965755433549191 0.46678043469157 1.0 ['ENST00000518114.1_1_2:190619886-190627438:-|nuORF', 'nc|ENSG00000128694|Q9H4B0-3|OSGEPL1', 'ENST00000524043.1_1_2:190618786-190626366:-|nuORF', 'nc|ENSG00000128694|Q9H4B0-2|OSGEPL1', 'ENSG00000128694|ENST00000264151|OSGEPL1'] 7644 7458 ASLRNANPR True PC9_epitope_Rep4 997.5417254128499 997.54062993586 36.041 2 -9.966517004869498 0.46678043469157 1.0 ['ENSG00000161040|ENST00000440067|FBXL13', 'ENST00000379305.7_2_7:102696092-102715217:-|nuORF', 'ENST00000471074.1_1_7:102687466-102715217:-|nuORF'] 37393 4261 GVYKSRAP True PC9_epitope_Rep4 876.4817509252398 876.48064993586 22.789 2 -10.001207090869787 0.4669221185757509 1.0 ['ENST00000463472.1_1_22:50969089-50969740:-|nuORF', 'ENST00000469660.1_1_22:50969089-50970101:-|nuORF', 'ENST00000405135.5_1_22:50968911-50969740:-|nuORF', 'ENSG00000177989|ENST00000329363|ODF3B', 'ENST00000468249.1_1_22:50968911-50969740:-|nuORF'] 63045 24463 LNKHRRYEIRM True PC9_epitope_Rep4 1514.82523455586 1514.8241299358601 102.58 2 -10.109096112923526 0.46698004564584683 1.0 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2', 'nc|ENSG00000069188|Q58EX2-2|SDK2', 'ENST00000479356.1_1_17:71354047-71433905:-|nuORF'] 117252 15833 TYYREKEE True PC9_epitope_Rep2 1116.50875351872 1116.5076499358602 66.161 2 -10.110514084593763 0.4669856258964185 1.0 ['nc|ENSG00000107581|Q14152-2|EIF3A', 'ENSG00000107581|ENST00000369144|EIF3A'] 95833 18188 SDISWVWWLV True NCI_RA007_Epitope_Rep3 1289.6444591458899 1289.64280490379 79.66 3 -10.1810250482176 0.46700167504187606 1.0 ['nc|ENSG00000162493|Q86YL7-2|PDPN'] 35841 19614 GVAAAGHA True PC9_epitope_Rep3 652.3292730351201 652.32872496793 80.683 1 -10.22817928693772 0.4670128347396411 1.0 ['ENST00000563067.5_1_16:2258286-2258875:+|nuORF'] 123149 5323 VHEQQMDDNE True PC9_epitope_Rep3 1243.4775300434296 1243.47589490379 25.553 3 -10.229024336051117 0.4670128347396411 1.0 ['ZFX|p.I769Tfs*26|1|0.76|ENSG00000005889|chrX:24211262-24211265|CATT/-|frameshift_variant', 'ENSG00000005889|ENST00000304543|ZFX', 'nc|ENSG00000005889|P17010-3|ZFX', 'nc|ENSG00000005889|P17010-2|ZFX'] 130075 7401 VTQKSSGP True PC9_epitope_Rep3 802.4184819623399 802.41738993586 33.476 2 -10.255260884636431 0.4670184144132827 1.0 ['CON__Q9H552', 'ENST00000409686.2_1_9:102067468-102068890:+|nuORF'] 92481 24629 RRAGKRYKF True PC9_epitope_Rep4 1180.6941437333198 1180.6935749679299 103.23 1 -10.297292760123844 0.4670344625434446 1.0 ['ENSG00000111817|ENST00000644252|DSE'] 122181 20333 VGRKTALH True PC9_epitope_Rep2 880.52428444356 880.52318993586 83.633 2 -10.413810638490492 0.4670616684288212 1.0 ['nc|ENSG00000133466|Q9BXI9-3|C1QTNF6', 'ENST00000470655.5_1_22:37578230-37578845:-|nuORF', 'nc|ENSG00000133466|Q9BXI9-1|C1QTNF6', 'ENST00000493023.1_1_22:37578230-37581504:-|nuORF', 'ENSG00000133466|ENST00000337843|C1QTNF6'] 82619 5683 PVLAFVISWLP True NCI_RA007_Epitope_Rep3 1240.7219811906 1240.72033490379 29.335 3 -10.41871758800573 0.4670616684288212 1.0 ['TAAR8|p.T262P|1|0.23|ENSG00000146385|chr6:132553476-132553476|A/C|missense_variant'] 38367 5332 HGELGGHP True PC9_epitope_Rep4 802.3722004762601 802.37110993586 27.224 2 -10.446840430041092 0.4670616684288212 1.0 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2'] 34017 13068 GNKSLRHNL True PC9_epitope_Rep4 1037.57302554113 1037.57192993586 58.159 2 -10.535160852122768 0.4670937621036544 1.0 ['ENST00000296292.7_1_3:53123294-53123450:-|nuORF'] 65674 9281 LSHDESNSEP True PC9_epitope_Rep3 1113.45744622185 1113.45634993586 40.641 2 -10.545338263155182 0.4670937621036544 1.0 ['nc|ENSG00000129422|Q9ULD2-5|MTUS1', 'ENST00000523718.5_1_8:17581004-17613316:-|nuORF', 'nc|ENSG00000129422|Q9ULD2-2|MTUS1', 'ENSG00000129422|ENST00000693296|MTUS1'] 34036 23644 GNNKKAPLN True PC9_epitope_Rep4 954.5246783663799 954.52358993586 99.29 2 -10.67484466355493 0.4671153866284243 1.0 ['ENSG00000111727|ENST00000229330|HCFC2'] 36897 15642 GVQQQRPP True PC9_epitope_Rep3 908.4828135543999 908.48170993586 65.314 2 -10.688103449400662 0.4671153866284243 1.0 ['ENST00000582620.5_1_18:72167208-72179735:+|nuORF', 'ENST00000584581.5_1_18:72178181-72179738:+|nuORF'] 57544 23330 LEKVRKTQKR True PC9_epitope_Rep3 1284.79900272468 1284.7979099358602 95.018 2 -10.706413661969224 0.46712096470292674 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L', 'ENST00000503190.1_1_4:169317058-169322080:-|nuORF'] 52283 23617 KPAATRKRRW True PC9_epitope_Rep3 1268.75780661904 1268.75670993586 96.129 2 -10.787989626129946 0.46712440602038896 1.0 ['ENSG00000124788|ENST00000436367|ATXN1'] 35270 13026 GSNGVDHRSY True PC9_epitope_Rep2 1090.47918472594 1090.47808993586 55.385 2 -10.793275017623415 0.46712440602038896 1.0 ['nc|ENSG00000196159|Q6V0I7-3|FAT4', 'nc|ENSG00000196159|Q6V0I7|FAT4', 'ENSG00000196159|ENST00000394329|FAT4'] 122638 21225 VGTNGGLK True PC9_epitope_Rep2 744.41300265908 744.4124549679301 87.101 1 -10.81089900771817 0.46712440602038896 1.0 ['nc|ENSG00000145934|Q9NT68-2|TENM2', 'ENSG00000145934|ENST00000518659|TENM2'] 24481 13708 FAIILYFY True NCI_RA007_Epitope_Rep4 1048.5633552908798 1048.56224993586 59.951 2 -10.817796803025983 0.46712440602038896 1.0 ['OR2G6|p.L168Pfs*13|1|0.17|ENSG00000188558|chr1:248522144-248522145|-/C|frameshift_variant', 'ENSG00000188558|ENST00000641804|OR2G6'] 52384 22764 KPGKDIRNHI True PC9_epitope_Rep4 1176.6727395824 1176.6716499358602 95.779 2 -10.834131377804924 0.46712440602038896 1.0 ['ENSG00000188295|ENST00000448299|ZNF669', 'nc|ENSG00000188295|Q96BR6|ZNF669'] 79998 24805 PKDQQQPP True PC9_epitope_Rep3 936.4664947839199 936.46538993586 100.79 2 -10.839933745790526 0.46712440602038896 1.0 ['nc|ENSG00000197705|Q9P2G3-2|KLHL14', 'ENSG00000197705|ENST00000359358|KLHL14'] 65528 7127 LSGAAKQP True PC9_epitope_Rep2 770.42865272322 770.42754993586 32.807 2 -10.86658913096895 0.46712440602038896 1.0 ['nc|ENSG00000164616|Q9UKT6|FBXL21P'] 114630 12105 TSPAKTKI True PC9_epitope_Rep2 844.50181766348 844.50072993586 51.871 2 -10.89332483342287 0.46712440602038896 1.0 ['nc|ENSG00000100207|Q9UGU0-2|TCF20', 'ENSG00000100207|ENST00000677622|TCF20'] 52510 4438 KPPEGARAP True PC9_epitope_Rep3 921.5032146458099 921.50210993586 22.169 2 -10.93093606347161 0.46712440602038896 1.0 ['ENST00000399413.3_1_17:7983259-7983811:+|nuORF'] 5661 6250 APAKTKES True PC9_epitope_Rep3 830.4497820906199 830.44868993586 29.078 2 -10.93754362522544 0.46712440602038896 1.0 ['nc|ENSG00000139220|O75334-6|PPFIA2', 'nc|ENSG00000139220|O75334-3|PPFIA2', 'ENSG00000139220|ENST00000549396|PPFIA2', 'nc|ENSG00000139220|O75334-2|PPFIA2'] 30799 20793 GAPPAHAP True PC9_epitope_Rep2 716.3605731634 716.36002496793 85.422 1 -11.014542451115224 0.4671299833582785 1.0 ['ENSG00000196976|ENST00000357360|LAGE3'] 10147 3909 CCCCCCSC True PC9_epitope_Rep2 826.10688658094 826.10578993586 20.301 2 -11.041513404919788 0.4671306714113768 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 10146 3771 CCCCCCSC True PC9_epitope_Rep2 826.10688658094 826.10578993586 19.77 2 -11.042998267489624 0.4671306714113768 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 81589 23272 PRLPRSTT True PC9_epitope_Rep2 926.5297637468201 926.52866993586 95.0 2 -11.15392024172884 0.467132047431161 1.0 ['nc|ENSG00000123569|Q7Z2G1-1|H2BW1'] 127893 22063 VRPGLRGD True PC9_epitope_Rep3 868.4878989348399 868.48680993586 90.163 2 -11.155459983359009 0.467132047431161 1.0 ['ENST00000567007.5_1_16:67226100-67226544:+|nuORF'] 57479 14280 LEKHRDRIP True PC9_epitope_Rep2 1162.65708951826 1162.65544490379 60.194 3 -11.168004140302276 0.467132047431161 1.0 ['ENST00000515378.5_1_4:2256939-2263707:-|nuORF'] 36906 7044 GVQRRGGL True PC9_epitope_Rep3 841.4882332880097 841.48712993586 32.105 2 -11.171272999385206 0.467132047431161 1.0 ['ENST00000339859.8_1_10:75335378-75385356:-|nuORF'] 52895 27003 KRGCRQAFHV True PC9_epitope_Rep3 1200.6298292246 1200.62872993586 111.02 2 -11.20092011293974 0.46713762428048144 1.0 ['MLLT10|p.H160R|1|0.22|ENSG00000078403|chr10:21612421-21612421|A/G|missense_variant'] 140922 12288 YYYMFLYF True NCI_RA007_Epitope_Rep4 1208.5252555299996 1208.5241499358601 54.265 2 -11.24475752181166 0.46716413224351394 1.0 ['ENSG00000196131|ENST00000341702|VN1R2'] 111634 16933 TLNRQKYRHVD True PC9_epitope_Rep3 1428.75859446468 1428.7574899358601 70.288 2 -11.282097541549652 0.46721157066309443 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 8900 8350 AVGGEKDPP True PC9_epitope_Rep2 868.4290466460399 868.4279499358599 37.488 2 -11.28930192069144 0.46721714650508095 1.0 ['nc|ENSG00000149541|O94766-2|B3GAT3', 'ENST00000532585.5_1_11:62383175-62388587:-|nuORF', 'ENSG00000149541|ENST00000265471|B3GAT3'] 57514 8077 LEKQKRYE True PC9_epitope_Rep3 1092.5927579262 1092.5916699358602 36.044 2 -11.321004393983667 0.4672338733308217 1.0 ['nc|ENSG00000009954|Q9UIG0-2|BAZ1B', 'ENSG00000009954|ENST00000339594|BAZ1B', 'BAZ1B|p.W777Cfs*13|1|0.15|ENSG00000009954|chr7:73477130-73477131|-/A|frameshift_variant'] 91890 23425 RPPGGGGG True PC9_epitope_Rep2 653.32452200785 653.3239749679301 95.577 1 -11.32270333697498 0.4672338733308217 1.0 ['ENSG00000146834|ENST00000310512|MEPCE', 'ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 52894 26521 KRGCRQAFHV True PC9_epitope_Rep3 1200.6298292246 1200.62872993586 108.45 2 -11.329290676745856 0.4672338733308217 1.0 ['MLLT10|p.H160R|1|0.22|ENSG00000078403|chr10:21612421-21612421|A/G|missense_variant'] 59122 7275 LGEKSRPGT True PC9_epitope_Rep3 943.5086939490699 943.50758993586 32.991 2 -11.381520633876258 0.4672603786221836 1.0 ['ENST00000487903.5_1_13:113536502-113536748:+|nuORF'] 123739 16034 VIRGGATR True PC9_epitope_Rep2 828.49298431528 828.49188993586 66.931 2 -11.451184771255424 0.467261063845373 1.0 ['ENST00000578046.1_2_19:5687695-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-7|HSD11B1L', 'ENST00000581423.1_1_19:5687386-5687953:+|nuORF', 'nc|ENSG00000167733|Q7Z5J1-5|HSD11B1L', 'nc|ENSG00000167733|Q7Z5J1-6|HSD11B1L', 'ENSG00000167733|ENST00000339423|HSD11B1L'] 137018 7803 YKNWRRQQQQQ True PC9_epitope_Rep4 1561.78620619485 1561.78456490379 37.415 3 -11.462209275366247 0.467261063845373 1.0 ['nc|ENSG00000260528|P0CG43|FAM157C'] 58620 15629 LFFPMFDL True PC9_epitope_Rep2 1028.5041261625997 1028.50302993586 65.394 2 -11.49251199861605 0.4672875680200921 1.0 ['ENST00000321437.8_1_15:63556543-63556594:+|nuORF'] 119602 20328 VERRWWRRRLW True PC9_epitope_Rep2 1697.9491296293697 1697.9480299358602 83.614 2 -11.522436377300846 0.46729314260001464 1.0 ['ENST00000284971.7_1_21:27102007-27107256:-|nuORF'] 81541 24162 PRADPRTV True PC9_epitope_Rep2 910.49846361854 910.49736993586 98.466 2 -11.627322561060577 0.4673719679370461 1.0 ['ENST00000536793.5_1_12:15837214-15942237:-|nuORF'] 21513 19459 ERRFSFQKKKK True PC9_epitope_Rep3 1480.8626656103995 1480.8615699358602 80.077 2 -11.8869192700086 0.4674193987212624 1.0 ['nc|ENSG00000011451|O95785|WIZ', 'ENSG00000011451|ENST00000673675|WIZ', 'ENST00000595214.2_1_19:15547509-15549737:-|nuORF', 'WIZ|p.A1445Hfs*6|1|0.26|ENSG00000011451|chr19:15427015-15427015|C/-|frameshift_variant'] 107812 14368 TAPQTQHVS True PC9_epitope_Rep4 967.47230844035 967.47120993586 63.175 2 -11.941512137653223 0.46747797333779795 1.0 ['ENSG00000104529|ENST00000618139|EEF1D', 'nc|ENSG00000104529|P29692-3|EEF1D', 'nc|ENSG00000104529|P29692|EEF1D', 'ENST00000526786.5_1_8:144662606-144679251:-|nuORF', 'nc|ENSG00000104529|P29692-4|EEF1D'] 102164 13879 SPRRGGPA True PC9_epitope_Rep4 796.4303840587198 796.42928993586 61.286 2 -11.953277659068332 0.46747797333779795 1.0 ['ENSG00000103356|ENST00000449606|EARS2', 'nc|ENSG00000103356|Q5JPH6-2|EARS2', 'ENST00000564461.5_1_16:23555833-23563620:-|nuORF'] 82689 20042 PVPAEHRAP True PC9_epitope_Rep2 972.51411368268 972.5130099358599 82.496 2 -12.012515856784088 0.46747797333779795 1.0 ['ENSG00000102781|ENST00000380615|KATNAL1'] 125759 9556 VNHYLRQR True PC9_epitope_Rep4 1084.5890099584399 1084.5879099358601 44.373 2 -12.069239421456604 0.46750447330145345 1.0 ['OR4K5|p.P308Q|1|0.27|ENSG00000176281|chr14:19921529-19921529|C/A|missense_variant'] 48255 5313 KDGLPGHPGQ True PC9_epitope_Rep2 1004.5039429218 1004.50284993586 25.825 2 -12.134519071980577 0.46752050895697306 1.0 ['nc|ENSG00000204248|P13942-7|COL11A2', 'nc|ENSG00000204248|P13942-4|COL11A2', 'nc|ENSG00000204248|P13942-3|COL11A2', 'nc|ENSG00000204248|P13942|COL11A2', 'ENSG00000204248|ENST00000341947|COL11A2', 'COL11A2|p.I1056Lfs*289|1|0.19|ENSG00000204248|chr6:33171560-33171560|G/-|frameshift_variant', 'nc|ENSG00000204248|P13942-8|COL11A2', 'nc|ENSG00000204248|P13942-6|COL11A2', 'nc|ENSG00000204248|P13942-5|COL11A2', 'nc|ENSG00000204248|P13942-2|COL11A2', 'nc|ENSG00000060718|P12107-4|COL11A1', 'COL5A1|p.G1477Wfs*5|1|0.25|ENSG00000130635|chr9:134819033-134819034|-/C|frameshift_variant', 'nc|ENSG00000130635|P20908-2|COL5A1', 'ENSG00000130635|ENST00000371817|COL5A1', 'COL5A1|p.G1477Rfs*5|1|0.28|ENSG00000130635|chr9:134819035-134819035|T/CC|frameshift_variant', 'nc|ENSG00000060718|P12107-3|COL11A1', 'ENSG00000060718|ENST00000370096|COL11A1', 'nc|ENSG00000060718|P12107-2|COL11A1'] 92439 8760 RQVCKNQSL True PC9_epitope_Rep2 1074.5604122521 1074.55930993586 39.051 2 -12.231738302774914 0.4676411807175967 1.0 ['ENST00000488921.5_1_9:94877276-94877652:-|nuORF'] 74073 19447 NHTRVNCYKC True PC9_epitope_Rep3 1236.5491959453998 1236.54754490379 80.029 3 -12.246250752536024 0.4676467510725123 1.0 ['ENST00000600766.1_3_19:23032061-23041232:+|nuORF', 'ENSG00000268696|ENST00000600766|ZNF723'] 63717 22190 LPQRAHRPA True PC9_epitope_Rep4 1044.59409533888 1044.59298993586 93.599 2 -12.290218620500077 0.4676523213108579 1.0 ['nc|ENSG00000129255|O75352-2|MPDU1'] 38944 22970 HIRALATRR True PC9_epitope_Rep4 1092.6628436050398 1092.6617499358601 96.573 2 -12.366586946484832 0.4676892813794835 1.0 ['SPTA1|p.S361R|1|0.22|ENSG00000163554|chr1:158676170-158676170|G/C|missense_variant'] 124994 24489 VLNRKEKT True PC9_epitope_Rep2 986.58727862294 986.58618993586 99.787 2 -12.40417282912946 0.4676948510562607 1.0 ['ENSG00000173258|ENST00000309235|ZNF483', 'ZNF483|p.G355R|1|0.33|ENSG00000173258|chr9:111541998-111541998|G/A|missense_variant'] 32848 15896 GIHHKGSPL True PC9_epitope_Rep4 944.5191990631199 944.51810993586 69.073 2 -12.564445722747722 0.46770042061648565 1.0 ['HYAL4|p.G96Dfs*21|1|0.38|ENSG00000106302|chr7:123868558-123868558|G/-|frameshift_variant'] 91214 23845 RLRLRKERVSD True PC9_epitope_Rep2 1426.84807817542 1426.84642490379 97.189 3 -12.62953679705128 0.46770599006016217 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 87156 14228 QSKHKKSL True PC9_epitope_Rep2 954.5610638750999 954.55996993586 59.995 2 -12.717753196112659 0.46777433665355317 1.0 ['ENSG00000186472|ENST00000333891|PCLO', 'nc|ENSG00000186472|Q9Y6V0-6|PCLO', 'PCLO|p.E4969Gfs*3|1|0.26|ENSG00000186472|chr7:82805715-82805716|-/C|frameshift_variant'] 60798 18264 LKHGHLPH True PC9_epitope_Rep4 937.52461879673 937.52352993586 78.322 2 -12.718483816921717 0.46777990520731977 1.0 ['ENST00000335997.11_1_X:129199166-129199613:-|nuORF'] 72871 18723 NARNARSL True PC9_epitope_Rep4 900.488961564 900.48786993586 80.099 2 -12.768110904229554 0.46780639896210424 1.0 ['ENSG00000165182|ENST00000379211|CXorf58'] 114306 9493 TSALSKKP True PC9_epitope_Rep4 830.48616759934 830.48506993586 44.127 2 -12.77701087793621 0.4678070726093325 1.0 ['nc|ENSG00000135314|Q4VXA5|KHDC1', 'ENSG00000135314|ENST00000257765|KHDC1'] 8945 9423 AVGPKAAGDN True PC9_epitope_Rep4 898.4508447197799 898.44974993586 43.856 2 -12.797556710581512 0.4678070726093325 1.0 ['ENSG00000184730|ENST00000564831|APOBR', 'nc|ENSG00000184730|Q0VD83-3|APOBR'] 91213 23751 RLRLRKERVSD True PC9_epitope_Rep2 1426.84807817542 1426.84642490379 96.829 3 -12.827970356784567 0.4678126405875645 1.0 ['nc|ENSG00000107593|Q9P0L9-4|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-3|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-2|PKD2L1', 'nc|ENSG00000107593|Q9P0L9-5|PKD2L1', 'ENSG00000107593|ENST00000318222|PKD2L1'] 91600 14064 RPDASARSV True PC9_epitope_Rep4 957.49919189453 957.49808993586 62.006 2 -12.939508578414749 0.4678182084492896 1.0 ['ENST00000541278.5_1_11:63993530-63993668:-|nuORF'] 98380 11407 SIHRRLHLTKR True PC9_epitope_Rep4 1415.8585832894698 1415.85694490379 51.647 3 -13.011973576798702 0.46781888182122533 1.0 ['ENST00000527561.5_1_8:144766681-144776697:+|nuORF', 'ENST00000532486.5_1_8:144774355-144776697:+|nuORF', 'ENSG00000181135|ENST00000358656|ZNF707'] 2914 19556 AFDKNNPSNK True PC9_epitope_Rep3 1133.5465360097699 1133.54542993586 80.457 2 -13.023576426813332 0.46781888182122533 1.0 ['ENSG00000154122|ENST00000284268|ANKH'] 40432 22392 HSAAAAAA True PC9_epitope_Rep4 668.32418765468 668.32363496793 94.364 1 -13.033957296586678 0.46782444944290424 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'EMX2|p.F51L|1|0.33|ENSG00000170370|chr10:117543418-117543418|T/C|missense_variant', 'nc|ENSG00000170370|Q04743-2|EMX2', 'nc|ENSG00000006377|P56179-2|DLX6', 'DLX6|p.D256Tfs*37|1|0.09|ENSG00000006377|chr7:97009929-97009929|G/-|frameshift_variant', 'ENSG00000006377|ENST00000518156|DLX6', 'ENSG00000166188|ENST00000299237|ZNF319', 'ENSG00000043355|ENST00000376335|ZIC2'] 11557 12596 DGPVHRHL True PC9_epitope_Rep4 929.4831479075701 929.48204993586 56.284 2 -13.089171455337576 0.46784047873119494 1.0 ['ENST00000378295.8_1_1:3569180-3598955:+|nuORF'] 65444 13862 LSEYKKPEKTK True PC9_epitope_Rep4 1349.75546614685 1349.75383490379 61.222 3 -13.160380407222599 0.4678565076840993 1.0 ['ENSG00000147251|ENST00000276202|DOCK11'] 49107 10291 KGDKQTVVS True PC9_epitope_Rep4 960.52400966004 960.52290993586 47.271 2 -13.236669484547997 0.467893459430054 1.0 ['ENSG00000171634|ENST00000306378|BPTF', 'nc|ENSG00000171634|Q12830|BPTF', 'nc|ENSG00000171634|Q12830-4|BPTF'] 91951 13529 RPPPGGKG True PC9_epitope_Rep4 764.42932142956 764.42877496793 59.935 1 -13.398622800346214 0.4681716898034334 1.0 ['nc|ENSG00000138892|A6PVC2|TTLL8', 'ENSG00000138892|ENST00000433387|TTLL8', 'nc|ENSG00000138892|A6PVC2-2|TTLL8'] 59201 10342 LGFVFMLLV True PC9_epitope_Rep2 1037.5983609006098 1037.5972699358601 45.106 2 -13.433975301342192 0.4681716898034334 1.0 ['nc|ENSG00000029364|Q9NUM3-3|SLC39A9', 'nc|ENSG00000029364|Q9NUM3-2|SLC39A9', 'ENSG00000029364|ENST00000336643|SLC39A9', 'ENST00000555245.5_1_14:69865254-69925307:+|nuORF'] 130864 22022 VVGNGHRL True PC9_epitope_Rep2 850.4773342511401 850.47622993586 90.179 2 -13.44249273011116 0.4681716898034334 1.0 ['nc|ENSG00000110080|Q11206-7|ST3GAL4', 'nc|ENSG00000110080|Q11206-3|ST3GAL4', 'nc|ENSG00000110080|Q11206-6|ST3GAL4', 'nc|ENSG00000110080|Q11206-5|ST3GAL4', 'nc|ENSG00000110080|Q11206-2|ST3GAL4', 'ENSG00000110080|ENST00000444328|ST3GAL4', 'nc|ENSG00000110080|Q11206-4|ST3GAL4'] 111347 24585 TLIGDDKNKK True PC9_epitope_Rep3 1130.62953735774 1130.62844993586 99.929 2 -13.532219742586312 0.46822466080152314 1.0 ['ENSG00000181381|ENST00000682922|DDX60L', 'nc|ENSG00000181381|Q5H9U9-2|DDX60L'] 121822 18961 VGNGKGAA True PC9_epitope_Rep4 672.3554877829599 672.35493496793 81.022 1 -13.555264092081467 0.46822466080152314 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 119626 19272 VESCDCHP True PC9_epitope_Rep3 888.31058838948 888.30948993586 79.351 2 -13.651736449121973 0.46828385531078054 1.0 ['ENST00000439875.1_1_9:115871246-115871747:-|nuORF'] 119653 9389 VESKHQTL True PC9_epitope_Rep2 940.4977949122 940.49668993586 41.451 2 -13.654721358410626 0.46828385531078054 1.0 ['ENSG00000247596|ENST00000305533|TWF2'] 16163 14048 EEERRRQEDYW True PC9_epitope_Rep2 1594.7124321178997 1594.71132993586 59.316 2 -13.750721978663764 0.46828385531078054 1.0 ['ENSG00000109265|ENST00000682029|CRACD', 'CRACD|p.G643Afs*34|1|0.59|ENSG00000109265|chr4:56315425-56315425|C/-|frameshift_variant'] 103937 24273 SRPPGGGG True PC9_epitope_Rep2 683.3350866915499 683.33453496793 98.907 1 -13.754233142415986 0.46828385531078054 1.0 ['ENST00000362058.2_2_1:16957286-16958865:-|nuORF'] 128855 23225 VSSLRRSKQV True PC9_epitope_Rep4 1158.6833042661 1158.6816449037901 97.565 3 -13.767209122171543 0.46828385531078054 1.0 ['ENSG00000126860|ENST00000462804|EVI2A', 'nc|ENSG00000126860|P22794-2|EVI2A'] 49213 19249 KGQVLRRV True PC9_epitope_Rep3 954.6086827738599 954.60758993586 79.263 2 -13.813032626563993 0.46830120393711494 1.0 ['ENST00000585047.5_1_17:38218205-38233770:+|nuORF', 'ENST00000577486.1_1_17:38228403-38233770:+|nuORF', 'ENST00000584985.5_1_17:38219164-38233770:+|nuORF'] 137905 22817 YPPFFLLL True PC9_epitope_Rep2 1008.5684406713199 1008.56734993586 93.253 2 -13.81381538877303 0.46830120393711494 1.0 ['ENSG00000180974|ENST00000641726|OR52E4'] 88833 5759 RDWFRGRR True PC9_epitope_Rep2 1147.6111423853497 1147.6094849037902 27.546 3 -13.817234052182553 0.46830120393711494 1.0 ['ENST00000567745.5_1_15:71839748-72030507:+|nuORF'] 79619 14180 PHAGRYGV True PC9_epitope_Rep2 855.43513508599 855.4340299358599 59.811 2 -13.843362916422793 0.46830120393711494 1.0 ['ENST00000368171.3_1_1:158150758-158150947:+|nuORF'] 104618 10219 SSVFFIEFL True NCI_RA007_Epitope_Rep4 1087.5589981864298 1087.5579099358602 46.163 2 -13.853229657494733 0.46830120393711494 1.0 ['ENST00000474002.1_1_1:79095456-79101246:+|nuORF'] 39817 15993 HQETQKRL True PC9_epitope_Rep4 1038.5570411238198 1038.55594993586 69.45 2 -13.85903787038078 0.46830676540730515 1.0 ['nc|ENSG00000118557|Q8TBY8-3|PMFBP1', 'nc|ENSG00000118557|Q8TBY8-4|PMFBP1', 'ENSG00000118557|ENST00000237353|PMFBP1', 'nc|ENSG00000118557|Q8TBY8-1|PMFBP1'] 130193 26459 VTSAAGHA True PC9_epitope_Rep3 712.35040240252 712.34985496793 108.14 1 -13.915273758739325 0.46831232676115264 1.0 ['ENST00000470873.1_1_2:47132604-47168896:-|nuORF'] 110955 18372 TLCQTKVR True PC9_epitope_Rep2 947.5222358382299 947.52112993586 75.997 2 -14.007630072836657 0.4683548275753867 1.0 ['ENST00000593099.5_1_17:33326330-33329895:+|nuORF'] 5837 23918 APGGIRETRRT True PC9_epitope_Rep3 1212.6687168311198 1212.6681749679299 97.286 1 -14.007711547728379 0.4683548275753867 1.0 ['ENSG00000089693|ENST00000203630|MLF2'] 36376 24349 GVHSGPAH True PC9_epitope_Rep4 760.36163579256 760.36052993586 102.14 2 -14.02067406634949 0.46835548954596323 1.0 ['ENST00000589389.5_1_16:4854724-4855165:-|nuORF'] 32439 20830 GGHGAAAA True PC9_epitope_Rep4 610.2823228427 610.28177496793 88.273 1 -14.025674105303665 0.46835548954596323 1.0 ['ENSG00000169221|ENST00000409939|TBC1D10B'] 82324 10058 PTQDKSAV True PC9_epitope_Rep4 844.42904664604 844.4279499358599 46.356 2 -14.080911484067029 0.46839242757033783 1.0 ['ENSG00000131018|ENST00000367255|SYNE1', 'nc|ENSG00000131018|Q8NF91-4|SYNE1', 'SYNE1|p.Q7617Nfs*7|1|0.14|ENSG00000131018|chr6:152206339-152206339|C/-|frameshift_variant', 'ENST00000367256.9_1_6:152443573-152639413:-|nuORF', 'nc|ENSG00000131018|Q8NF91-2|SYNE1', 'nc|ENSG00000131018|Q8NF91-8|SYNE1', 'SYNE1|p.A7944Dfs*49|1|0.2|ENSG00000131018|chr6:152156057-152156057|G/-|frameshift_variant'] 4478 24585 AKGRRKAF True PC9_epitope_Rep4 932.5668179618798 932.56572993586 103.06 2 -14.141627241736488 0.46847120101243583 1.0 ['ENSG00000204657|ENST00000641840|OR2H2'] 60382 24001 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 104.06 3 -14.178991446818449 0.4685032370075199 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 60383 24606 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 106.86 3 -14.182561449835275 0.4685032370075199 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 6188 7382 APQKLTDK True PC9_epitope_Rep3 899.5076313199099 899.50652993586 33.404 2 -14.24503776939315 0.4685561888824975 1.0 ['ENSG00000146950|ENST00000380913|SHROOM2'] 45867 15142 ISQKQNSKSVP True PC9_epitope_Rep2 1214.66190011518 1214.66080993586 63.503 2 -14.279391219696278 0.4685561888824975 1.0 ['CCNT1|p.S474Vfs*18|1|0.27|ENSG00000129315|chr12:48693795-48693796|-/A|frameshift_variant', 'ENSG00000129315|ENST00000261900|CCNT1'] 90788 23995 RKRRTSLKL True PC9_epitope_Rep4 1156.7516586094398 1156.75056993586 100.77 2 -14.301289959927209 0.46855684658585817 1.0 ['ENSG00000099901|ENST00000430524|RANBP1'] 126802 8113 VPSRFNRR True PC9_epitope_Rep4 1030.5784452747398 1030.5773499358602 38.66 2 -14.303177507744312 0.46855684658585817 1.0 ['nc|ENSG00000114302|P13861-2|PRKAR2A', 'ENSG00000114302|ENST00000265563|PRKAR2A'] 92642 24545 RRFLLRRA True PC9_epitope_Rep4 1086.6886644300598 1086.6875699358602 102.9 2 -14.394812698069996 0.4685817063861381 1.0 ['MDGA2|p.R624Efs*5|1|0.16|ENSG00000139915|chr14:46957594-46957594|A/-|frameshift_variant', 'MDGA2|p.G941Efs*2|1|0.22|ENSG00000139915|chr14:46855084-46855085|CC/-|frameshift_variant', 'ENSG00000139915|ENST00000399232|MDGA2'] 62890 9958 LMSGENSAK True PC9_epitope_Rep2 935.4382314307501 935.43712993586 43.634 2 -14.402498680521393 0.4685817063861381 1.0 ['nc|ENSG00000148120|Q8N6M6-3|AOPEP', 'nc|ENSG00000148120|Q8N6M6-4|AOPEP', 'nc|ENSG00000148120|Q8N6M6-2|AOPEP', 'C9orf3-WDR53|1|fusion', 'ENSG00000148120|ENST00000375315|AOPEP', 'C9orf3-WDR53|2|fusion'] 90071 21268 RGMVTRSS True PC9_epitope_Rep4 892.4548845544 892.45378993586 89.976 2 -14.403709286508139 0.4685817063861381 1.0 ['ENSG00000173120|ENST00000529006|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-2|KDM2A', 'KDM2A|p.D1016Ffs*23|1|0.24|ENSG00000173120|chr11:67253561-67253570|TCAAGGACCC/-|frameshift_variant', 'nc|ENSG00000173120|Q9Y2K7-5|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-4|KDM2A', 'nc|ENSG00000173120|Q9Y2K7-3|KDM2A'] 352 24382 AAKLGNAKAQ True PC9_epitope_Rep2 970.5559784946599 970.55488993586 99.352 2 -14.449899869127028 0.4685817063861381 1.0 ['nc|ENSG00000159921|Q9Y223-4|GNE', 'nc|ENSG00000159921|Q9Y223-3|GNE', 'ENSG00000159921|ENST00000642385|GNE', 'nc|ENSG00000159921|Q9Y223-2|GNE', 'nc|ENSG00000159921|Q9Y223-5|GNE'] 60029 9304 LHRPQTTTS True PC9_epitope_Rep3 1039.54105670651 1039.53994993586 40.729 2 -14.451083676155404 0.4685817063861381 1.0 ['ENST00000380913.7_1_X:9864694-9900474:+|nuORF'] 10140 7222 CCCCCCCSR True PC9_epitope_Rep4 982.20799760454 982.20688993586 35.084 2 -14.493769187004885 0.4685817063861381 1.0 ['ENST00000498308.1_1_7:5111775-5112846:+|nuORF'] 94060 21200 RVRVKGGG True PC9_epitope_Rep4 827.5089687325898 827.50786993586 89.71 2 -14.501028919091118 0.4685817063861381 1.0 ['ENSG00000105193|ENST00000251453|RPS16'] 26945 19848 FLILFSIHLIY True NCI_RA007_Epitope_Rep4 1377.80604516773 1377.80440490379 85.786 3 -14.543595523116334 0.4685817063861381 1.0 ['nc|ENSG00000154263|Q8WWZ4-2|ABCA10', 'ENSG00000154263|ENST00000690296|ABCA10', 'ENST00000522406.5_1_17:67144970-67178294:-|nuORF'] 129721 23034 VTKARLTDK True PC9_epitope_Rep2 1030.61349337078 1030.6123899358602 94.094 2 -14.556287334563532 0.4685817063861381 1.0 ['ENSG00000067900|ENST00000399799|ROCK1'] 96829 25389 SESKKLKVS True PC9_epitope_Rep2 1004.5866099165999 1004.58607496793 103.34 1 -14.61149041090524 0.4685817063861381 1.0 ['ENSG00000162779|ENST00000367618|AXDND1'] 129847 21979 VTLIRHHR True PC9_epitope_Rep4 1030.61483078346 1030.6137299358602 92.759 2 -14.645168490251992 0.4685817063861381 1.0 ['ZNF169|p.Q421H|1|0.62|ENSG00000175787|chr9:94300821-94300821|G/T|missense_variant'] 20235 6502 ENVQRNLKH True PC9_epitope_Rep2 1136.6050539454 1136.60341490379 30.424 3 -14.67054282998545 0.4685817063861381 1.0 ['ENSG00000084674|ENST00000233242|APOB', 'APOB|p.I3228Lfs*38|1|0.19|ENSG00000084674|chr2:21007186-21007186|T/-|frameshift_variant', 'APOB|p.V2091L|1|0.29|ENSG00000084674|chr2:21010597-21010597|C/A|missense_variant'] 46974 25798 IVNRKENKLKK True PC9_epitope_Rep4 1368.8565176007999 1368.85542993586 108.77 2 -14.819062772347477 0.4685977203806337 1.0 ['nc|ENSG00000188687|Q9BY07-7|SLC4A5', 'nc|ENSG00000188687|Q9BY07-4|SLC4A5', 'nc|ENSG00000188687|Q9BY07-8|SLC4A5', 'ENST00000451608.2_1_2:74452054-74542150:-|nuORF', 'ENSG00000188687|ENST00000394019|SLC4A5', 'nc|ENSG00000188687|Q9BY07|SLC4A5', 'nc|ENSG00000188687|Q9BY07-2|SLC4A5'] 124048 24333 VKQLQQQQ True PC9_epitope_Rep3 998.5508931142199 998.54978993586 98.91 2 -14.905643179322864 0.46860327717999395 1.0 ['nc|ENSG00000172379|Q9HBZ2-2|ARNT2', 'ENSG00000172379|ENST00000303329|ARNT2'] 39048 25055 HKRYKIQKKVR True PC9_epitope_Rep2 1482.9259345732999 1482.92482993586 102.04 2 -14.95916642632896 0.4686039337885458 1.0 ['nc|ENSG00000163938|Q9BVP2-2|GNL3', 'ENSG00000163938|ENST00000418458|GNL3', 'ENST00000462550.5_1_3:52720108-52721634:+|nuORF', 'ENST00000492349.5_1_3:52720087-52722217:+|nuORF', 'ENST00000468146.5_1_3:52720039-52723083:+|nuORF', 'ENST00000496254.5_1_3:52720087-52724795:+|nuORF'] 58767 16340 LFMDARHKR True PC9_epitope_Rep2 1172.6236812149998 1172.62204490379 68.098 3 -14.960578291162413 0.4686039337885458 1.0 ['ENSG00000115596|ENST00000233948|WNT6'] 85638 12818 QLQAEKQKA True PC9_epitope_Rep4 1042.5771078620598 1042.5760099358602 57.167 2 -15.029311807890961 0.46861994688081643 1.0 ['ENSG00000106244|ENST00000350498|PDAP1'] 65529 7224 LSGAAKQP True PC9_epitope_Rep2 770.42865272322 770.42754993586 33.177 2 -15.207320752563444 0.46866242837425237 1.0 ['nc|ENSG00000164616|Q9UKT6|FBXL21P'] 102005 23598 SPPGPPRK True PC9_epitope_Rep3 834.47118624154 834.47008993586 96.055 2 -15.213094681890878 0.46866242837425237 1.0 ['ENSG00000039523|ENST00000042381|RIPOR1', 'nc|ENSG00000039523|Q6ZS17|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-3|RIPOR1', 'nc|ENSG00000039523|Q6ZS17-4|RIPOR1'] 68485 17724 LTVFYFFL True PC9_epitope_Rep2 1048.5633552908798 1048.56224993586 73.457 2 -15.277666273496871 0.4686839959012108 1.0 ['ENST00000541418.1_1_11:95509061-95512189:-|nuORF', 'ENST00000545813.1_1_11:95504727-95512189:-|nuORF'] 98570 14971 SIMHPSQHAR True PC9_epitope_Rep2 1162.5665602617003 1162.5654699358602 62.843 2 -15.281502578704597 0.4686839959012108 1.0 ['NOS1|p.S1027Afs*23|2|0.22|ENSG00000089250|chr12:117234722-117234722|C/-|frameshift_variant', 'NOS1|p.P1042Lfs*8|1|0.25|ENSG00000089250|chr12:117234675-117234675|G/-|frameshift_variant', 'nc|ENSG00000089250|P29475-2|NOS1', 'ENSG00000089250|ENST00000317775|NOS1', 'NOS1|p.P526Rfs*39|1|0.26|ENSG00000089250|chr12:117278046-117278046|G/-|frameshift_variant', 'NOS1|p.I464Sfs*101|1|0.25|ENSG00000089250|chr12:117280860-117280860|G/-|frameshift_variant', 'NOS1|p.M688Cfs*52|1|0.29|ENSG00000089250|chr12:117265391-117265391|G/-|frameshift_variant', 'nc|ENSG00000089250|P29475-3|NOS1', 'nc|ENSG00000089250|P29475-5|NOS1'] 10145 3678 CCCCCCSC True PC9_epitope_Rep2 826.10688658094 826.10578993586 19.416 2 -15.343822105549915 0.46870000731918987 1.0 ['RGS17|p.W32C|1|0.31|ENSG00000091844|chr6:153043923-153043923|C/A|missense_variant'] 70591 22918 LYYRKDKRRQ True PC9_epitope_Rep4 1424.80006535384 1424.7989699358602 96.373 2 -15.406688569120977 0.4687006618500434 1.0 ['nc|ENSG00000196338|Q9NZ94-3|NLGN3', 'nc|ENSG00000196338|Q9NZ94-2|NLGN3', 'ENSG00000196338|ENST00000358741|NLGN3'] 78016 19073 PALLVLLFC True NCI_RA007_Epitope_Rep4 987.5827108364699 987.58160993586 82.509 2 -15.557020547236492 0.4687006618500434 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.G241Efs*36|1|0.52|ENSG00000126259|chr19:35860343-35860343|G/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 97379 5754 SGCACGCGCE True PC9_epitope_Rep4 888.2234302612 888.22232993586 28.968 2 -15.712789081061443 0.4687375839066519 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 48287 24230 KDLHARPA True PC9_epitope_Rep4 906.5035489989799 906.50244993586 101.68 2 -15.73303929516918 0.4687431385464697 1.0 ['ENSG00000168502|ENST00000695636|MTCL1', 'nc|ENSG00000168502|Q9Y4B5|MTCL1'] 122451 23321 VGSLQHAR True PC9_epitope_Rep4 866.4722488706999 866.47170496793 97.962 1 -15.808282988690914 0.4687591485090544 1.0 ['ENSG00000124194|ENST00000342560|GDAP1L1', 'nc|ENSG00000124194|Q96MZ0-4|GDAP1L1'] 36962 22199 GVRIKRTS True PC9_epitope_Rep2 915.5613982282699 915.56084496793 90.871 1 -15.84478316790976 0.46877515813686027 1.0 ['ENSG00000147799|ENST00000377307|ARHGAP39', 'nc|ENSG00000147799|Q9C0H5|ARHGAP39'] 26947 13734 FLIPAWAGMWL True PC9_epitope_Rep2 1303.6787364796298 1303.67762993586 58.116 2 -15.891658693486875 0.46879116742989774 1.0 ['ENST00000377735.7_1_19:46286319-46286718:-|nuORF'] 108054 3700 TDGSRETP True PC9_epitope_Rep4 861.38282472961 861.38172993586 20.368 2 -16.058431557794307 0.46895484626402234 1.0 ['ENSG00000111203|ENST00000228799|ITFG2'] 41378 16298 IAPERKEEKN True PC9_epitope_Rep2 1212.6462500510397 1212.64459490379 67.935 3 -16.10594514627936 0.46895484626402234 1.0 ['ENSG00000119285|ENST00000366582|HEATR1'] 8992 11420 AVHQKQSGL True PC9_epitope_Rep4 966.5246783663799 966.52358993586 51.696 2 -16.15354638937033 0.46895484626402234 1.0 ['ENST00000556905.2_1_15:22016140-22016464:-|nuORF'] 83380 7886 QARQKESTL True PC9_epitope_Rep2 1059.56727145435 1059.5661699358602 35.699 2 -16.190233696514756 0.46895484626402234 1.0 ['ENSG00000154920|ENST00000338165|EME1', 'nc|ENSG00000154920|Q96AY2-2|EME1'] 80 21283 AAALRQQQ True PC9_epitope_Rep2 884.4828135544001 884.48170993586 87.327 2 -16.224949332317994 0.46895484626402234 1.0 ['nc|ENSG00000100285|P12036-2|NEFH', 'ENSG00000100285|ENST00000310624|NEFH'] 92695 25250 RRHKKLPLTA True PC9_epitope_Rep2 1218.76730867358 1218.7662099358602 102.79 2 -16.318885063236696 0.46898130723874043 1.0 ['nc|ENSG00000140750|Q68EM7-6|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-5|ARHGAP17', 'ARHGAP17|p.G687Sfs*39|1|0.38|ENSG00000140750|chr16:24931239-24931241|CCT/AA|frameshift_variant', 'ENSG00000140750|ENST00000289968|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-2|ARHGAP17', 'nc|ENSG00000140750|Q68EM7-4|ARHGAP17', 'ENST00000575447.1_1_16:24979927-25026645:-|nuORF'] 15657 16169 ECDDCDSC True PC9_epitope_Rep2 888.1935696015601 888.19246993586 67.447 2 -16.462003998884345 0.46901822211535443 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 102133 22605 SPQTRHLP True PC9_epitope_Rep2 934.49846361854 934.49736993586 92.451 2 -16.60980247648043 0.46908649925774143 1.0 ['ENST00000342409.3_1_10:14050444-14050501:-|nuORF'] 106135 7231 SVPAARDR True PC9_epitope_Rep2 870.46716349026 870.46606993586 33.203 2 -16.742857082042814 0.4691443207359783 1.0 ['ENST00000265626.8_3_20:56227391-56286474:-|nuORF', 'ENST00000341744.7_2_20:56227391-56284786:-|nuORF'] 97380 18889 SGCACGCGCE True PC9_epitope_Rep4 888.2234302612 888.22232993586 80.742 2 -16.763529731139545 0.4691498703688216 1.0 ['ENST00000252445.7_1_19:11664367-11664523:-|nuORF'] 30786 3804 GAPHPHVGQ True PC9_epitope_Rep4 898.44094874242 898.43984993586 20.795 2 -16.880693342687028 0.46925505446486443 1.0 ['chr16:681907-682020|101|14.08|0.42|5.06|+|2|None,STUB1|1'] 90636 22607 RKKKRKKKSFR True PC9_epitope_Rep4 1488.9841181557597 1488.98302993586 95.188 2 -16.892187682530498 0.46925505446486443 1.0 ['FAM133A|p.C102F|1|0.22|ENSG00000179083|chrX:93709724-93709724|G/T|missense_variant'] 114949 23208 TTGRTSSTG True PC9_epitope_Rep4 866.40937383062 866.40826993586 97.498 2 -16.9418058042057 0.469354686960976 1.0 ['ENST00000263980.7_1_1:27429020-27429197:-|nuORF'] 101273 15775 SLWRRLRSRQR True PC9_epitope_Rep2 1512.88619501964 1512.8850899358602 65.942 2 -17.19920379727013 0.4694075955718631 1.0 ['ENST00000308027.6_1_17:6939675-6939873:+|nuORF'] 126136 11814 VPETKDVKK True PC9_epitope_Rep4 1042.60225998074 1042.60116993586 53.21 2 -17.20180226258059 0.4694075955718631 1.0 ['nc|ENSG00000169129|Q8N4X5-2|AFAP1L2', 'ENSG00000169129|ENST00000304129|AFAP1L2', 'nc|ENSG00000169129|Q8N4X5-4|AFAP1L2'] 110893 13066 TLAKKGSP True PC9_epitope_Rep2 800.4756029156399 800.4745099358599 55.537 2 -17.317483351905032 0.46942423482187656 1.0 ['FBXL6|p.E429K|1|0.34|ENSG00000182325|chr8:144356155-144356155|C/T|missense_variant'] 60833 15096 LKKNQMEN True PC9_epitope_Rep2 1003.5120650773499 1003.5114749679301 63.325 1 -17.546613286423426 0.46942423482187656 1.0 ['nc|ENSG00000204410|O43196-4|MSH5', 'ENSG00000204410|ENST00000375750|MSH5', 'nc|ENSG00000204410|O43196-2|MSH5', 'nc|ENSG00000204410|O43196-3|MSH5'] 62867 13138 LMPWLILEL True PC9_epitope_Rep2 1126.64603936902 1126.64440490379 55.808 3 -17.58259724624035 0.46942423482187656 1.0 ['ENST00000256689.9_1_12:46761121-46764364:-|nuORF'] 2929 11171 AFFLFMDLF True NCI_RA007_Epitope_Rep3 1149.5568900114497 1149.55525490379 51.047 3 -17.69709797975316 0.46944023415042074 1.0 ['ENST00000380874.3_1_6:1612762-1612825:+|nuORF'] 93384 24330 RRWMVRKMKT True PC9_epitope_Rep2 1390.7801989397399 1390.77856490379 99.126 3 -17.72755537817284 0.469440873028317 1.0 ['ENSG00000225921|ENST00000451315|NOL7'] 2930 11264 AFFLFMDLF True NCI_RA007_Epitope_Rep3 1149.5568900114497 1149.55525490379 51.422 3 -17.75976998368714 0.469440873028317 1.0 ['ENST00000380874.3_1_6:1612762-1612825:+|nuORF'] 64587 13249 LREAGEKKAP True PC9_epitope_Rep2 1097.61930702721 1097.61820993586 56.238 2 -17.940136261983945 0.4694568716812309 1.0 ['ENSG00000169840|ENST00000302945|GSX1'] 100969 16214 SLSSRARRPV True PC9_epitope_Rep2 1127.65233849099 1127.65124993586 67.614 2 -18.012234111616646 0.4694630556804047 1.0 ['ENST00000530353.1_1_8:145980074-145980368:-|nuORF'] 45634 11369 ISHLKEAE True PC9_epitope_Rep2 925.4868958753299 925.48578993586 49.052 2 -18.068000580120266 0.4694630556804047 1.0 ['ENSG00000011198|ENST00000644371|ABHD5', 'ENST00000486764.1_1_3:43732436-43740870:+|nuORF'] 109376 9795 TGLHTTKDP True PC9_epitope_Rep2 968.4927095317599 968.49160993586 43.015 2 -18.13515362866573 0.4694630556804047 1.0 ['ENST00000379263.7_1_7:102985147-102985279:-|nuORF'] 115523 21638 TVGRRQTV True PC9_epitope_Rep2 915.52501271955 915.52390993586 88.705 2 -18.261613192266225 0.4694762581508109 1.0 ['ENST00000324348.8_2_17:7818490-7818643:-|nuORF'] 90524 6076 RKEDNDEI True PC9_epitope_Rep4 1017.4727023631699 1017.47160993586 30.375 2 -18.375726112992936 0.4694762581508109 1.0 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 14144 5154 DSHSAVSGNAQ True PC9_epitope_Rep2 1071.45811492819 1071.45700993586 25.202 2 -18.377240070142385 0.4694762581508109 1.0 ['FKBP15|p.G1133Vfs*45|2|0.29|ENSG00000119321|chr9:113169311-113169311|C/-|frameshift_variant', 'nc|ENSG00000119321|Q5T1M5-2|FKBP15', 'ENSG00000119321|ENST00000238256|FKBP15', 'nc|ENSG00000119321|Q5T1M5-3|FKBP15'] 90523 5998 RKEDNDEI True PC9_epitope_Rep4 1017.4727023631699 1017.47160993586 30.037 2 -18.380905450559702 0.4694762581508109 1.0 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 60414 25366 LIKGGRIRKQ True PC9_epitope_Rep2 1167.7564096367098 1167.75475490379 103.25 3 -18.610461510631595 0.4694762581508109 1.0 ['ENSG00000101680|ENST00000389658|LAMA1', 'ENST00000579014.5_1_18:6942080-7042306:-|nuORF'] 121821 19652 VGNGKGAA True PC9_epitope_Rep2 672.3554877829599 672.35493496793 80.977 1 -18.6395955457173 0.4694762581508109 1.0 ['ENSG00000144029|ENST00000272418|MRPS5', 'ENST00000464458.1_1_2:95770271-95772347:-|nuORF', 'ENST00000475895.5_1_2:95770271-95787536:-|nuORF'] 33516 4383 GLHKQEAP True PC9_epitope_Rep4 878.4610154806599 878.45990993586 23.302 2 -18.772590256976173 0.4694762581508109 1.0 ['nc|ENSG00000148482|Q504Y0-5|SLC39A12', 'nc|ENSG00000148482|Q504Y0-3|SLC39A12', 'nc|ENSG00000148482|Q504Y0-4|SLC39A12', 'ENSG00000148482|ENST00000377369|SLC39A12'] 133605 12207 WIPALLLTI True NCI_RA007_Epitope_Rep4 1038.6477536211798 1038.64664993586 53.95 2 -18.784153077173876 0.4694762581508109 1.0 ['CXCR4|p.V320Cfs*24|1|0.26|ENSG00000121966|chr2:136114970-136114971|-/A|frameshift_variant', 'ENSG00000121966|ENST00000241393|CXCR4', 'nc|ENSG00000121966|P61073-2|CXCR4'] 63666 25227 LPPKLRRQKAT True PC9_epitope_Rep2 1306.8197381692598 1306.81864993586 102.7 2 -18.905672343133798 0.4694762581508109 1.0 ['ENSG00000179715|ENST00000546455|PCED1B'] 57516 15444 LEKRDLRRRKR True PC9_epitope_Rep4 1524.9437098957599 1524.9426099358602 67.338 2 -18.908382454069947 0.4694762581508109 1.0 ['ENST00000598953.1_1_19:52264477-52266695:+|nuORF'] 33135 22952 GKPNKRRGF True PC9_epitope_Rep4 1058.6097454030198 1058.60864993586 96.505 2 -19.189195063625018 0.4694762581508109 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 82357 18160 PTTKVQKDP True PC9_epitope_Rep2 1012.5553097883197 1012.55420993586 75.157 2 -19.22958625562179 0.4694762581508109 1.0 ['ENSG00000173517|ENST00000682557|PEAK1'] 11260 21540 DERAQKRQPIR True PC9_epitope_Rep4 1395.7694935015497 1395.7683899358601 91.032 2 -19.236353374509214 0.4694762581508109 1.0 ['nc|ENSG00000091428|Q8WZA2-2|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-5|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-4|RAPGEF4', 'nc|ENSG00000091428|Q8WZA2-3|RAPGEF4', 'ENSG00000091428|ENST00000397081|RAPGEF4'] 121139 20224 VGGGHGGP True PC9_epitope_Rep4 636.29797290684 636.29742496793 85.931 1 -19.23750147099474 0.4694762581508109 1.0 ['ENST00000306917.4_1_15:68570649-68570838:+|nuORF'] 60387 24935 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 108.5 3 -19.278829540923432 0.4694762581508109 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 60388 25004 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 108.84 3 -19.27946446558226 0.4694762581508109 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 60389 25079 LIIIKDLLLLI True NCI_RA007_Epitope_Rep4 1278.8890465156999 1278.8874149037902 109.22 3 -19.280174087259777 0.4694762581508109 1.0 ['ENST00000262460.4_1_20:25398781-25405892:+|nuORF'] 104938 11254 STGPKKPRM True PC9_epitope_Rep4 1000.5487849392399 1000.54768993586 51.062 2 -19.336551381546393 0.4694762581508109 1.0 ['ENST00000392177.8_1_6:159188516-159190383:-|nuORF'] 119431 6016 VEPHSPSPSSK True PC9_epitope_Rep2 1150.56185172074 1150.56074993586 28.531 2 -19.342791905855943 0.4694762581508109 1.0 ['ENSG00000180357|ENST00000326648|ZNF609'] 41150 13815 HYRFRMKQ True PC9_epitope_Rep2 1164.5974664671598 1164.5963699358601 58.423 2 -19.35078376315143 0.4694762581508109 1.0 ['SDK1|p.P1422Lfs*13|1|0.1|ENSG00000146555|chr7:4145758-4145759|CC/T|frameshift_variant', 'nc|ENSG00000146555|Q7Z5N4-3|SDK1', 'ENSG00000146555|ENST00000404826|SDK1'] 121986 6963 VGQDGRQVKE True PC9_epitope_Rep4 1114.5730851107799 1114.57198993586 34.021 2 -19.392235938390705 0.4694762581508109 1.0 ['nc|ENSG00000141252|Q5VIR6-2|VPS53'] 48307 24468 KDNSLAKN True PC9_epitope_Rep4 888.46649478392 888.46538993586 102.6 2 -19.462134720682105 0.4694762581508109 1.0 ['ENSG00000115827|ENST00000375255|DCAF17', 'DCAF17|p.S411Vfs*23|1|0.41|ENSG00000115827|chr2:171478028-171478028|A/-|frameshift_variant', 'nc|ENSG00000115827|Q5H9S7-2|DCAF17'] 36593 18302 GVLIFALALFG True NCI_RA007_Epitope_Rep3 1119.6692173417498 1119.6681299358602 80.148 2 -19.49485197021849 0.4694762581508109 1.0 ['ENST00000512235.1_1_4:122261523-122301889:-|nuORF', 'ENSG00000186867|ENST00000394427|QRFPR'] 15658 16224 ECDDCDSC True PC9_epitope_Rep2 888.1935696015601 888.19246993586 67.652 2 -19.508183093716752 0.4694762581508109 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 15656 16123 ECDDCDSC True PC9_epitope_Rep2 888.1935696015601 888.19246993586 67.275 2 -19.509818560610327 0.4694762581508109 1.0 ['ENSG00000053747|ENST00000313654|LAMA3', 'nc|ENSG00000053747|Q16787-3|LAMA3', 'nc|ENSG00000053747|Q16787-1|LAMA3', 'nc|ENSG00000053747|Q16787-4|LAMA3'] 16176 16242 EEEWRQRRR True PC9_epitope_Rep2 1343.6806784971498 1343.6795899358601 67.719 2 -19.731572409413427 0.469497795147234 1.0 ['ENST00000555166.5_2_14:57857320-57866549:+|nuORF', 'ENST00000554703.1_1_14:57857320-57876115:+|nuORF'] 49179 24466 KGPKELDTR True PC9_epitope_Rep2 1042.5771078620598 1042.5760099358602 99.697 2 -19.88903817774351 0.469497795147234 1.0 ['nc|ENSG00000110514|Q8WXG6-7|MADD', 'nc|ENSG00000110514|Q8WXG6|MADD', 'ENSG00000110514|ENST00000706887|MADD', 'nc|ENSG00000110514|Q8WXG6-6|MADD', 'nc|ENSG00000110514|Q8WXG6-8|MADD', 'nc|ENSG00000110514|Q8WXG6-5|MADD', 'nc|ENSG00000110514|Q8WXG6-4|MADD', 'nc|ENSG00000110514|Q8WXG6-3|MADD', 'nc|ENSG00000110514|Q8WXG6-2|MADD'] 122606 23283 VGTKRDLR True PC9_epitope_Rep2 943.5563128478299 943.55576496793 95.041 1 -20.179500930272066 0.46956603517278134 1.0 ['ENST00000578535.1_1_18:22265891-22265996:-|nuORF'] 89763 10519 RFCEEKASQK True PC9_epitope_Rep2 1224.5921063032 1224.59047490379 45.783 3 -20.256354862796243 0.46956667119465834 1.0 ['ENST00000369151.7_1_10:120445350-120445566:-|nuORF'] 90787 24714 RKRRTSLKL True PC9_epitope_Rep2 1156.7516586094398 1156.75056993586 100.74 2 -20.317028460634827 0.46956667119465834 1.0 ['ENSG00000099901|ENST00000430524|RANBP1'] 3126 19791 AGDGGGSG True PC9_epitope_Rep2 576.21396849936 576.2134249679301 81.515 1 -20.468768211474277 0.46957775618319175 1.0 ['ENST00000533031.5_1_8:144776729-144776963:+|nuORF'] 68307 25427 LTRRFGQQNR True PC9_epitope_Rep2 1274.6956002852996 1274.6945099358602 103.49 2 -20.634983392451176 0.46957775618319175 1.0 ['ENST00000522674.1_1_7:27228344-27228893:+|nuORF'] 78017 19169 PALLVLLFC True NCI_RA007_Epitope_Rep4 987.5827108364699 987.58160993586 82.881 2 -20.755595699508138 0.4695992894833081 1.0 ['nc|ENSG00000126259|Q6UWL6-3|KIRREL2', 'nc|ENSG00000126259|Q6UWL6-2|KIRREL2', 'ENSG00000126259|ENST00000360202|KIRREL2', 'KIRREL2|p.G241Efs*36|1|0.52|ENSG00000126259|chr19:35860343-35860343|G/-|frameshift_variant', 'nc|ENSG00000126259|Q6UWL6-5|KIRREL2'] 131718 21639 VWVPFIYSF True NCI_RA007_Epitope_Rep4 1156.59571804832 1156.5946299358602 93.817 2 -20.84464500414094 0.4695992894833081 1.0 ['ENSG00000143815|ENST00000272163|LBR', 'ENST00000424022.2_1_1:225594357-225599062:-|nuORF'] 41630 9910 IDHGQDQNP True PC9_epitope_Rep2 1022.44173658806 1022.4406299358601 43.451 2 -20.941026287557985 0.469599924770393 1.0 ['ENSG00000187492|ENST00000412678|CDHR4'] 133768 18748 WLMLLILA True NCI_RA007_Epitope_Rep4 971.5877962169099 971.58668993586 81.109 2 -20.98673250669911 0.469599924770393 1.0 ['ENST00000505241.1_1_5:176950198-176951252:-|nuORF'] 90473 15762 RIVRRYLLRRQ True PC9_epitope_Rep2 1527.9586316839097 1527.95698490379 65.895 3 -21.347504999406695 0.4696159150750199 1.0 ['nc|ENSG00000181085|Q8TD08-2|MAPK15', 'nc|ENSG00000181085|Q8TD08-3|MAPK15', 'ENSG00000181085|ENST00000338033|MAPK15'] 32438 21541 GGHGAAAA True PC9_epitope_Rep2 610.2823228427 610.28177496793 88.324 1 -21.41124868788765 0.4696214567073107 1.0 ['ENSG00000169221|ENST00000409939|TBC1D10B'] 119451 6182 VEPRKQDA True PC9_epitope_Rep2 941.4930438849298 941.49194993586 29.169 2 -21.56948244702062 0.46970013582697734 1.0 ['nc|ENSG00000160752|P14324-2|FDPS', 'ENSG00000160752|ENST00000368356|FDPS', 'ENST00000470171.5_1_1:155279855-155288545:+|nuORF', 'ENST00000471117.5_1_1:155278696-155288124:+|nuORF', 'ENST00000461507.5_1_1:155279855-155288124:+|nuORF', 'ENST00000557880.2_1_15:80236959-80237118:+|nuORF', 'ENST00000487002.1_1_1:155279855-155282231:+|nuORF', 'ENST00000399474.2_1_X:44335819-44336572:-|nuORF'] 106547 19936 SVVTKHKKI True PC9_epitope_Rep2 1038.65496425994 1038.65386993586 82.081 2 -21.63785198357565 0.46972657270324203 1.0 ['ZNF695|p.L283V|1|0.14|ENSG00000197472|chr1:246987668-246987668|G/C|missense_variant'] 93887 25303 RVHVVYRRP True PC9_epitope_Rep2 1180.6941437333198 1180.69304993586 103.0 2 -21.653192812198615 0.46972720529081735 1.0 ['nc|ENSG00000087116|O95450-2|ADAMTS2', 'ENSG00000087116|ENST00000251582|ADAMTS2'] 63849 18343 LPTQQVRRSSR True PC9_epitope_Rep2 1326.7480297809798 1326.74638490379 75.886 3 -21.72976015390668 0.46972720529081735 1.0 ['ENSG00000102098|ENST00000251900|SCML2'] 122725 23907 VGVAGQRH True PC9_epitope_Rep2 822.44603412286 822.44548496793 97.436 1 -21.824268933834276 0.469754905033536 1.0 ['SVA_F_dup909|chr19:40117193-40118408:+|1.1615710171716431|0.2301661439299303|2.34|469.0|43|3|anti-sense'] 28147 25309 FRKKRVGS True PC9_epitope_Rep2 976.5930327097198 976.5924849679301 103.03 1 -21.854429180891977 0.469754905033536 1.0 ['ENST00000393802.6_1_5:171326080-171326947:-|nuORF'] 40561 24311 HSSPEGKEEPE True PC9_epitope_Rep2 1224.5258601348398 1224.5242049037902 99.054 3 -21.896209305928082 0.469754905033536 1.0 ['ENSG00000127838|ENST00000273077|PNKD', 'ENST00000472650.1_1_2:219136156-219182765:+|nuORF', 'nc|ENSG00000127838|Q8N490-2|PNKD'] 121077 6035 VGFVVPFTIML True NCI_RA007_Epitope_Rep4 1221.6831531537298 1221.68149490379 29.831 3 -21.90652549115552 0.469754905033536 1.0 ['ENSG00000134817|ENST00000606794|APLNR'] 118247 3460 VCDSNTCHNGG True PC9_epitope_Rep2 1105.39169224449 1105.3905899358601 18.588 2 -21.910529269139115 0.469754905033536 1.0 ['ENSG00000143126|ENST00000271332|CELSR2', 'CELSR2|p.G2673Afs*12|1|0.21|ENSG00000143126|chr1:109272367-109272367|G/-|frameshift_variant'] 3400 8084 AGKAEEREI True PC9_epitope_Rep2 1001.5141732523299 1001.51306993586 36.453 2 -22.07335937127249 0.4697604446348165 1.0 ['ENST00000328668.7_1_5:149682265-149682355:-|nuORF'] 109273 8722 TGCCQRAPD True PC9_epitope_Rep2 949.3745856283698 949.37348993586 38.911 2 -22.208669980991125 0.46980777267028834 1.0 ['ENSG00000204140|ENST00000373861|CLPSL1'] 111826 6763 TLRHSEAT True PC9_epitope_Rep2 913.46174375665 913.46064993586 31.421 2 -22.377182860586124 0.46982375863185716 1.0 ['ENSG00000149403|ENST00000527524|GRIK4'] 81736 20817 PSARHAGP True PC9_epitope_Rep2 791.4038349577098 791.4032849679301 85.515 1 -22.476551843845506 0.4699128726938426 1.0 ['ENST00000354670.8_1_15:40398252-40401051:-|nuORF'] 66478 17900 LSRSHCKNI True PC9_epitope_Rep2 1056.5498475684 1056.54874993586 74.156 2 -22.561398782665897 0.4699497508435799 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 55398 19919 LASVGKKP True PC9_epitope_Rep2 798.49633836022 798.49524993586 82.015 2 -22.588065784043543 0.46995037868895273 1.0 ['ENSG00000165359|ENST00000639893|INTS6L', 'nc|ENSG00000165359|Q5JSJ4|INTS6L'] 38366 5314 HGELGGHP True PC9_epitope_Rep2 802.3722004762601 802.37110993586 25.83 2 -22.607508285258696 0.46995037868895273 1.0 ['nc|ENSG00000129219|O14939-4|PLD2', 'ENSG00000129219|ENST00000263088|PLD2'] 127849 25333 VRLRRWRHL True PC9_epitope_Rep2 1290.78977545366 1290.78866993586 103.12 2 -22.623735871554782 0.4699559158431356 1.0 ['ENST00000342232.4_1_8:75233190-75233559:-|nuORF'] 77871 6508 PAGPPGEK True PC9_epitope_Rep2 751.38645355807 751.38534993586 30.446 2 -22.678295540298752 0.469982345628715 1.0 ['nc|ENSG00000139219|P02458-1|COL2A1', 'ENSG00000139219|ENST00000380518|COL2A1'] 126764 10113 VPSKSRESV True PC9_epitope_Rep2 987.53490869691 987.53380993586 44.236 2 -22.782173627562635 0.4700087748621093 1.0 ['ENSG00000128052|ENST00000263923|KDR'] 42902 23412 IFVFMFPL True NCI_RA007_Epitope_Rep3 1012.5455970517598 1012.54448993586 101.64 2 -22.911428411255322 0.47002475738804333 1.0 ['nc|ENSG00000167645|Q5BJH7-4|YIF1B', 'nc|ENSG00000167645|Q5BJH7-5|YIF1B'] 129285 4995 VTDRNDNA True PC9_epitope_Rep2 903.40462280335 903.40352993586 24.584 2 -23.13284011559085 0.4700407395800689 1.0 ['nc|ENSG00000240184|Q9UN70-2|PCDHGC3', 'ENSG00000240184|ENST00000308177|PCDHGC3'] 52435 24471 KPGRKDTIT True PC9_epitope_Rep2 1014.5821932424999 1014.58108993586 99.715 2 -23.293719570806076 0.4700671673752494 1.0 ['ENSG00000188316|ENST00000341276|ENO4'] 93318 22195 RRSGVKTL True PC9_epitope_Rep2 915.5613982282699 915.56030993586 90.855 2 -23.541313081292454 0.4700727029624368 1.0 ['nc|ENSG00000171174|Q9H477-2|RBKS', 'ENSG00000171174|ENST00000302188|RBKS'] 29523 25206 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 108.94 3 -23.553630547384753 0.47007823843397784 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29521 24192 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 104.73 3 -23.802458863592232 0.4701102000313365 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 63638 24105 LPNLFSVIDYF True PC9_epitope_Rep2 1326.6859896046997 1326.6848899358602 98.221 2 -23.8355269394996 0.4701102000313365 1.0 ['ENSG00000035720|ENST00000265404|STAP1'] 27501 17529 FPELFYFF True NCI_RA007_Epitope_Rep3 1108.52696978216 1108.52586993586 76.915 2 -23.976116504180165 0.47011573493774544 1.0 ['ALG10|p.Q290E|1|0.32|ENSG00000139133|chr12:34026361-34026361|C/G|missense_variant'] 39503 19990 HPDGRRLL True PC9_epitope_Rep2 962.5409971368599 962.53990993586 82.295 2 -24.058964143336205 0.47013171501091533 1.0 ['ENSG00000136040|ENST00000258526|PLXNC1'] 127990 25064 VRQGGGGV True PC9_epitope_Rep2 728.3929359208399 728.3923849679301 102.08 1 -24.108056766893338 0.47013233896322293 1.0 ['ENST00000271526.8_1_1:156737292-156737367:+|nuORF'] 8384 10924 ATPEKQVT True PC9_epitope_Rep2 872.46034677432 872.45924993586 47.341 2 -24.128001765641923 0.47013233896322293 1.0 ['nc|ENSG00000147133|P21675-25|TAF1', 'nc|ENSG00000147133|P21675-18|TAF1', 'nc|ENSG00000147133|P21675-17|TAF1', 'nc|ENSG00000147133|P21675|TAF1', 'ENSG00000147133|ENST00000423759|TAF1', 'nc|ENSG00000147133|P21675-1|TAF1', 'nc|ENSG00000147133|P21675-22|TAF1', 'nc|ENSG00000147133|P21675-13|TAF1', 'nc|ENSG00000147133|P21675-20|TAF1', 'nc|ENSG00000147133|P21675-19|TAF1', 'nc|ENSG00000147133|P21675-15|TAF1', 'ENST00000468167.5_1_X:70644073-70748398:+|nuORF', 'ENST00000482544.5_1_X:70678126-70686220:+|nuORF'] 88629 22296 RARADAAAAA True PC9_epitope_Rep2 942.4995262476998 942.49842993586 91.239 2 -24.497634298230654 0.4701563462803789 1.0 ['ENST00000533032.1_1_11:65374739-65375163:-|nuORF'] 90522 6343 RKEDNDEI True PC9_epitope_Rep2 1017.4727023631699 1017.47160993586 29.797 2 -24.756547831659997 0.4701563462803789 1.0 ['ENST00000582850.1_1_18:2945885-2946149:-|nuORF'] 122450 24041 VGSLQHAR True PC9_epitope_Rep2 866.4722488706999 866.47170496793 97.977 1 -24.84845447657663 0.4701563462803789 1.0 ['ENSG00000124194|ENST00000342560|GDAP1L1', 'nc|ENSG00000124194|Q96MZ0-4|GDAP1L1'] 40280 7541 HRPAGSPP True PC9_epitope_Rep2 817.4194850218499 817.41838993586 34.372 2 -24.89664438119437 0.4701563462803789 1.0 ['ENST00000308664.10_1_12:110719137-110719434:+|nuORF'] 98566 14463 SILWVWVL True PC9_epitope_Rep2 1014.5902387450599 1014.58914993586 60.903 2 -25.045845313983893 0.4701563462803789 1.0 ['ENSG00000169715|ENST00000330439|MT1E'] 135577 11600 YEEHLQAKK True PC9_epitope_Rep2 1144.58767254576 1144.58656993586 49.945 2 -25.068823841529056 0.4701563462803789 1.0 ['ENST00000432746.1_1_7:102781798-102782185:-|nuORF'] 8908 25793 AVGHHISE True PC9_epitope_Rep2 848.4140652882401 848.41296993586 104.94 2 -25.07212473445689 0.4701563462803789 1.0 ['ENST00000523504.5_1_8:22880186-22926453:-|nuORF'] 98567 14552 SILWVWVL True PC9_epitope_Rep2 1014.5902387450599 1014.58914993586 61.246 2 -25.12451493342729 0.4701563462803789 1.0 ['ENSG00000169715|ENST00000330439|MT1E'] 33132 23668 GKPNKRRGF True PC9_epitope_Rep2 1058.6097454030198 1058.60864993586 96.512 2 -25.196434587297063 0.4701563462803789 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 123276 25335 VHRPLDAARGR True PC9_epitope_Rep2 1246.70068566574 1246.69958993586 103.13 2 -25.264947947321318 0.4701563462803789 1.0 ['ENST00000361283.2_1_13:115079997-115086655:+|nuORF'] 4609 10359 ALAGRRVP True PC9_epitope_Rep2 838.5137197598599 838.51262993586 45.172 2 -25.545117975935494 0.4702140992167102 1.0 ['ENSG00000173327|ENST00000309100|MAP3K11', 'ENST00000527304.1_1_11:65380411-65381302:-|nuORF', 'ENST00000524856.1_1_11:65375623-65381302:-|nuORF'] 138560 7167 YRNRNWEK True PC9_epitope_Rep2 1164.57883919756 1164.57774993586 32.959 2 -25.69305254806351 0.4702208761944546 1.0 ['ENSG00000213471|ENST00000641754|TTLL13', 'nc|ENSG00000213471|A6NNM8|TTLL13'] 112683 17168 TPGARGLR True PC9_epitope_Rep2 826.47733425114 826.47622993586 71.296 2 -25.748476941227782 0.4702208761944546 1.0 ['ENST00000379568.3_1_6:10695190-10697573:+|nuORF'] 111622 15635 TLNREQEKEP True PC9_epitope_Rep2 1242.62042922602 1242.6193299358602 65.416 2 -25.7622699953509 0.4702208761944546 1.0 ['ENSG00000125848|ENST00000341420|FLRT3'] 24430 4955 FAGHRTRAA True PC9_epitope_Rep2 985.5205960454499 985.51948993586 24.422 2 -25.868438827215193 0.4702208761944546 1.0 ['KMT2D|p.T2742Hfs*15|1|0.23|ENSG00000167548|chr12:49039441-49039441|C/-|frameshift_variant'] 101384 22495 SMTTSHAA True PC9_epitope_Rep2 804.3436027699199 804.34250993586 92.016 2 -25.899165117603612 0.4702208761944546 1.0 ['MUC16|p.G10858A|1|0.41|ENSG00000181143|chr19:8938382-8938382|C/G|missense_variant'] 98970 25233 SKGLKGGGGG True PC9_epitope_Rep2 816.4453654165197 816.44481496793 102.73 1 -26.066941809524845 0.4702995112577802 1.0 ['ENSG00000143373|ENST00000336715|ZNF687', 'nc|ENSG00000143373|Q8N1G0-2|ZNF687'] 98672 15252 SIQHQRIH True PC9_epitope_Rep2 1017.54681079329 1017.54570993586 63.941 2 -26.13767725422587 0.47032592917489063 1.0 ['ENSG00000251247|ENST00000420450|ZNF345'] 84308 21480 QFHRHKQL True PC9_epitope_Rep2 1092.59409533888 1092.59357496793 88.093 1 -26.70197063972607 0.4704831921803695 1.0 ['nc|ENSG00000113520|P05112-2|IL4', 'ENSG00000113520|ENST00000231449|IL4'] 8285 6635 ATKSDPHSV True PC9_epitope_Rep2 940.4614094034799 940.46030993586 30.931 2 -26.789387541695547 0.4704831921803695 1.0 ['ENST00000325333.9_1_19:56154335-56154581:+|nuORF'] 23013 20203 EVIWVWLL True PC9_epitope_Rep2 1056.60080342876 1056.5997099358601 83.126 2 -27.079911965749446 0.47050654191945035 1.0 ['ENST00000443339.5_1_3:9475802-9506425:+|nuORF', 'ENST00000488236.5_1_3:9495468-9506425:+|nuORF'] 4614 21451 ALAKKHKRTP True PC9_epitope_Rep2 1148.71421047156 1148.71310993586 87.986 2 -27.11045307596047 0.47050654191945035 1.0 ['ENSG00000151632|ENST00000380753|AKR1C2', 'ENSG00000196139|ENST00000380554|AKR1C3', 'nc|ENSG00000196139|P42330-2|AKR1C3', 'ENST00000477661.1_1_10:5010485-5019931:+|nuORF', 'ENST00000460124.5_1_10:5032190-5041484:-|nuORF', 'ENSG00000187134|ENST00000380872|AKR1C1'] 98986 25685 SKKKGQIG True PC9_epitope_Rep2 844.5130510535198 844.51250496793 104.5 1 -27.1664335855654 0.47050654191945035 1.0 ['ENST00000367866.6_1_1:167388477-167388615:+|nuORF'] 19876 7963 ELVSCFIIFF True NCI_RA007_Epitope_Rep4 1216.620218544 1216.6191299358602 37.38 2 -27.40359982180479 0.47050654191945035 1.0 ['chr3:153927317-153979854|138|13.17|0.05|7.92|-|0|TE_info:L1PB1,L1PB1_dup2586,L1,LINE,donor,+,153979854,153983404|LINC02006,None|6'] 29524 25325 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 109.45 3 -27.4246925474168 0.47050654191945035 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29525 25537 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 110.4 3 -27.531642530222282 0.47050654191945035 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 59222 19661 LGGGAAHA True PC9_epitope_Rep2 652.3292730351201 652.32872496793 81.011 1 -27.59394372429107 0.47050654191945035 1.0 ['ENSG00000171532|ENST00000302584|NEUROD2'] 29522 24523 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 106.1 3 -27.60014146863377 0.47050654191945035 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 111633 16198 TLNRQKYRHVD True PC9_epitope_Rep2 1428.75859446468 1428.7574899358601 67.555 2 -27.878311762781646 0.4705329546403809 1.0 ['ENSG00000182446|ENST00000331134|NPLOC4', 'nc|ENSG00000182446|Q8TAT6-2|NPLOC4'] 82443 15334 PVDFVLIVLL True NCI_RA007_Epitope_Rep3 1126.70018311686 1126.69908993586 67.87 2 -28.178415466141036 0.47054893199423714 1.0 ['ENST00000536245.1_1_6:144098468-144110182:+|nuORF'] 78518 7979 PDKGQAGP True PC9_epitope_Rep2 768.3766171503598 768.37552993586 36.054 2 -28.25864542467544 0.47054893199423714 1.0 ['nc|ENSG00000073803|O43283-5|MAP3K13', 'nc|ENSG00000073803|O43283-4|MAP3K13', 'ENSG00000073803|ENST00000265026|MAP3K13'] 120918 9918 VGEESTHP True PC9_epitope_Rep2 854.37701107318 854.37590993586 43.482 2 -28.39184316021215 0.47054893199423714 1.0 ['ENSG00000166225|ENST00000549921|FRS2'] 125247 19027 VLRATSDK True PC9_epitope_Rep2 888.5028802926399 888.50178993586 78.552 2 -28.619868107012138 0.47054893199423714 1.0 ['ENST00000465876.5_1_1:60281005-60331594:+|nuORF', 'nc|ENSG00000134709|Q9UJC3-2|HOOK1', 'ENSG00000134709|ENST00000371208|HOOK1'] 126320 12432 VPKAQGGP True PC9_epitope_Rep2 752.4180880395198 752.41698993586 53.126 2 -28.88178155460222 0.47054893199423714 1.0 ['ENST00000515795.1_7:286228-299943:+|nuORF'] 130051 18447 VTPYKERNCDK True PC9_epitope_Rep2 1351.6554348357497 1351.65432993586 76.288 2 -29.12508418211878 0.47054893199423714 1.0 ['nc|ENSG00000175984|Q68D51-2|DENND2C', 'nc|ENSG00000175984|Q68D51-3|DENND2C', 'ENSG00000175984|ENST00000393274|DENND2C'] 40431 23105 HSAAAAAA True PC9_epitope_Rep2 668.32418765468 668.32363496793 94.364 1 -29.209039190736224 0.47054893199423714 1.0 ['nc|ENSG00000141448|Q92908-2|GATA6', 'ENSG00000141448|ENST00000269216|GATA6', 'EMX2|p.F51L|1|0.33|ENSG00000170370|chr10:117543418-117543418|T/C|missense_variant', 'nc|ENSG00000170370|Q04743-2|EMX2', 'nc|ENSG00000006377|P56179-2|DLX6', 'DLX6|p.D256Tfs*37|1|0.09|ENSG00000006377|chr7:97009929-97009929|G/-|frameshift_variant', 'ENSG00000006377|ENST00000518156|DLX6', 'ENSG00000166188|ENST00000299237|ZNF319', 'ENSG00000043355|ENST00000376335|ZIC2'] 32866 20245 GILDFYILL True NCI_RA007_Epitope_Rep3 1065.61103375929 1065.60992993586 88.204 2 -29.39330548829575 0.47054893199423714 1.0 ['ENSG00000090402|ENST00000264382|SI', 'SI|p.P1140Lfs*44|1|0.11|ENSG00000090402|chr3:165019606-165019606|G/-|frameshift_variant'] 97189 13596 SFILWWCF True PC9_epitope_Rep2 1100.5153595526401 1100.51426993586 57.586 2 -29.439814724243934 0.47054893199423714 1.0 ['ENST00000361360.3_2_2:105473593-105473881:+|nuORF'] 67675 16779 LTFQLFLIL True NCI_RA007_Epitope_Rep4 1106.6739683690198 1106.67286993586 72.725 2 -29.56490863769185 0.47054893199423714 1.0 ['ENST00000513762.2_1_4:2909397-2910421:+|nuORF'] 65892 22314 LSLDWRRRRK True PC9_epitope_Rep2 1384.8163841243197 1384.8152899358602 91.311 2 -29.565105125121864 0.47054893199423714 1.0 ['ENST00000586602.5_1_19:9679707-9694912:-|nuORF', 'ENST00000320451.6_1_19:9679704-9695196:-|nuORF'] 29546 25993 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 105.83 3 -29.597202737631658 0.47054893199423714 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29547 26071 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 106.22 3 -29.71579590988077 0.47054893199423714 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29549 26618 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 109.06 3 -29.754503361225897 0.47054893199423714 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29544 25744 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 104.74 3 -29.853936742761192 0.47054893199423714 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 115678 4907 TVLARHAH True PC9_epitope_Rep2 903.5038833521501 903.50278993586 24.241 2 -29.92322057368378 0.47054893199423714 1.0 ['nc|ENSG00000172367|Q86UT5-3|NHERF4', 'ENSG00000172367|ENST00000355547|NHERF4', 'nc|ENSG00000172367|Q86UT5|NHERF4', 'nc|ENSG00000172367|Q86UT5-5|NHERF4', 'nc|ENSG00000172367|Q86UT5-4|NHERF4'] 33133 24554 GKPNKRRGF True PC9_epitope_Rep2 1058.6097454030198 1058.60864993586 100.07 2 -30.048174827063487 0.47054893199423714 1.0 ['ENSG00000112273|ENST00000510882|HDGFL1'] 114951 12145 TTHEKIQA True PC9_epitope_Rep2 926.4821448480599 926.48104993586 52.025 2 -30.336861213953632 0.47054893199423714 1.0 ['ENSG00000151746|ENST00000652176|BICD1', 'nc|ENSG00000151746|Q96G01-4|BICD1', 'nc|ENSG00000151746|Q96G01-3|BICD1', 'nc|ENSG00000151746|Q96G01-2|BICD1'] 29532 24489 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 106.31 3 -30.53025550248095 0.47059621869355966 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29527 23551 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 102.18 3 -30.54453867507502 0.47061218524241033 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 88553 25217 RAHVTRRRQLF True PC9_epitope_Rep2 1438.83818219806 1438.8370899358601 102.66 2 -30.587008373059742 0.47064903068201985 1.0 ['ENST00000546265.1_1_12:11199669-11273613:-|nuORF'] 29534 24730 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 107.48 3 -30.59849902383938 0.47066008288878913 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 122485 24570 VGSQRRFVR True PC9_epitope_Rep2 1103.6312091235898 1103.63067496793 100.13 1 -30.629720429618803 0.47066008288878913 1.0 ['nc|ENSG00000125637|Q8NDX1-2|PSD4', 'ENSG00000125637|ENST00000245796|PSD4', 'ENST00000418251.6_1_2:113943320-113958989:+|nuORF', 'ENST00000409656.5_1_2:113943320-113958989:+|nuORF', 'ENST00000464559.1_1_2:113956206-113958989:+|nuORF'] 86058 13642 QPLTGHRP True PC9_epitope_Rep2 904.48789893484 904.4873549679301 57.766 1 -30.77680940417614 0.4706815738101949 1.0 ['ENST00000607315.1_1_8:30013391-30013664:-|nuORF'] 126330 11105 VPKKEKVP True PC9_epitope_Rep2 923.5804023373498 923.57930993586 48.038 2 -30.98401881349418 0.4706815738101949 1.0 ['TTN|p.Q33692Sfs*72|1|0.2|ENSG00000155657|chr2:178530618-178530618|G/-|frameshift_variant', 'ENSG00000155657|ENST00000589042|TTN', 'TTN|p.N34071Mfs*37|2|0.43|ENSG00000155657|chr2:178528610-178528616|TTAATAT/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-12|TTN', 'nc|ENSG00000155657|Q8WZ42-8|TTN', 'nc|ENSG00000155657|Q8WZ42|TTN', 'nc|ENSG00000155657|Q8WZ42-2|TTN', 'TTN|p.R32033Dfs*35|1|0.13|ENSG00000155657|chr2:178535595-178535595|T/-|frameshift_variant', 'nc|ENSG00000155657|Q8WZ42-13|TTN', 'nc|ENSG00000155657|Q8WZ42-4|TTN', 'nc|ENSG00000155657|Q8WZ42-11|TTN', 'nc|ENSG00000155657|Q8WZ42-7|TTN', 'TTN|p.A27646Pfs*114|2|0.4|ENSG00000155657|chr2:178557404-178557404|T/-|frameshift_variant', 'TTN|p.A27040Pfs*3|1|0.29|ENSG00000155657|chr2:178560091-178560091|C/-|frameshift_variant', 'TTN|p.P25632Qfs*77|1|0.11|ENSG00000155657|chr2:178564314-178564314|G/-|frameshift_variant', 'TTN|p.D24050Efs*6|1|0.1|ENSG00000155657|chr2:178569022-178569059|TTCCAGGAGGTTGTGGCACTTCTGCAACCTTAATTGGA/-|frameshift_variant', 'TTN|p.V23977Yfs*16|1|0.23|ENSG00000155657|chr2:178569280-178569280|C/-|frameshift_variant', 'TTN|p.K21393Nfs*78|1|0.52|ENSG00000155657|chr2:178577215-178577233|TACATCAAGGACTGTTACC/-|frameshift_variant', 'TTN|p.Y20592Cfs*3|2|0.28|ENSG00000155657|chr2:178581571-178581572|AC/-|frameshift_variant', 'TTN|p.P19707Lfs*17|1|0.16|ENSG00000155657|chr2:178587168-178587168|G/-|frameshift_variant', 'TTN|p.G14893Efs*11|2|0.44|ENSG00000155657|chr2:178613208-178613208|C/-|frameshift_variant', 'TTN|p.P11136Lfs*29|2|0.55|ENSG00000155657|chr2:178675929-178675929|G/-|frameshift_variant'] 81325 25530 PPRGPKAT True PC9_epitope_Rep2 822.47118624154 822.47008993586 103.88 2 -31.099924304408898 0.47070797753512744 1.0 ['ENST00000218104.5_1_X:152990328-152990616:+|nuORF'] 134444 19728 WTIFLFLRWVL True NCI_RA007_Epitope_Rep3 1492.8594777229198 1492.85782490379 86.009 3 -31.555891147007287 0.4708903037261246 1.0 ['ENST00000495145.1_1_1:179054938-179057273:+|nuORF'] 80607 12519 PLPFWLYVI True PC9_epitope_Rep2 1146.64775362118 1146.64609490379 53.462 3 -31.67007527610945 0.4708903037261246 1.0 ['ENSG00000151881|ENST00000397080|TMEM267'] 31033 17082 GAVPKPSKPT True PC9_epitope_Rep2 980.5654805492 980.56438993586 70.957 2 -31.77074609025045 0.4708903037261246 1.0 ['ENST00000466084.1_1_3:44959495-44960555:-|nuORF'] 28630 24325 FSRRKKKGS True PC9_epitope_Rep2 1092.6516102149997 1092.65050993586 99.106 2 -31.84713038326601 0.4708903037261246 1.0 ['nc|ENSG00000149527|O75038-3|PLCH2', 'ENSG00000149527|ENST00000378486|PLCH2', 'nc|ENSG00000149527|O75038-2|PLCH2', 'nc|ENSG00000149527|O75038-4|PLCH2', 'ENST00000343889.8_1_1:2411150-2434522:+|nuORF'] 59751 12191 LGVVLFISFLP True PC9_epitope_Rep2 1203.72673221787 1203.72508490379 52.206 3 -31.9188931609352 0.4708903037261246 1.0 ['ENST00000352241.8_1_3:70016772-70016910:+|nuORF'] 29520 23593 FVIFMFFLN True NCI_RA007_Epitope_Rep3 1176.6041745570399 1176.60253490379 102.34 3 -32.83874680669279 0.4708903037261246 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 45002 11091 IQLFTLLLWP True NCI_RA007_Epitope_Rep3 1242.7376312547399 1242.73597490379 50.726 3 -33.2083131385364 0.4708903037261246 1.0 ['ENSG00000026652|ENST00000320285|AGPAT4', 'nc|ENSG00000026652|Q9NRZ5-2|AGPAT4'] 92374 25212 RQQILRRHLKN True PC9_epitope_Rep2 1460.8800470100398 1460.8789499358602 102.65 2 -33.910306210875596 0.4708903037261246 1.0 ['ENST00000361138.6_1_9:72897446-72901170:+|nuORF'] 101136 20807 SLVLLVFLGF True PC9_epitope_Rep2 1106.67396836902 1106.67286993586 85.475 2 -34.164232525768696 0.4708903037261246 1.0 ['TMEM104-PCYT2|3|fusion', 'TMEM104-PCYT2|1|fusion', 'TMEM104-PCYT2|2|fusion', 'ENST00000584246.1_1_17:72773463-72781743:+|nuORF', 'nc|ENSG00000109066|Q8NE00-2|TMEM104', 'ENSG00000109066|ENST00000335464|TMEM104'] 71191 23706 MFLILVLIS True PC9_epitope_Rep2 1047.6402257125899 1047.6391299358602 96.655 2 -34.55302655482987 0.4708903037261246 1.0 ['ENST00000378024.8_2_11:62283482-62283515:-|nuORF'] 29545 25914 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 105.47 3 -34.60732166785859 0.4708903037261246 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29552 26916 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 110.72 3 -34.747133704114376 0.4708903037261246 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29548 26148 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 106.58 3 -34.81552358444805 0.4708903037261246 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 65449 12588 LSFAPFFLPF True PC9_epitope_Rep2 1184.6270181766 1184.62537490379 53.728 3 -35.00268410735601 0.4708903037261246 1.0 ['ENST00000329047.12_1_17:75316115-75316166:+|nuORF'] 98315 10996 SIGFDWTWMLL True NCI_RA007_Epitope_Rep4 1367.6583949578699 1367.65728993586 49.163 2 -35.65346413941021 0.4708903037261246 1.0 ['ENST00000491811.5_1_1:68608485-68620847:-|nuORF', 'nc|ENSG00000116729|Q5T9L3-3|WLS', 'ENSG00000116729|ENST00000262348|WLS', 'nc|ENSG00000116729|Q5T9L3-2|WLS'] 125550 16906 VLWWIGIL True PC9_epitope_Rep2 998.5953241254998 998.59422993586 70.273 2 -35.718877439017106 0.4708903037261246 1.0 ['ENSG00000164535|ENST00000297056|DAGLB', 'nc|ENSG00000164535|Q8NCG7-3|DAGLB', 'nc|ENSG00000164535|Q8NCG7-4|DAGLB'] 106564 14038 SVWLLLLLG True PC9_epitope_Rep2 1012.6321035570398 1012.63100993586 59.276 2 -37.345692350431776 0.47090438521425143 1.0 ['nc|ENSG00000173638|P41440-3|SLC19A1', 'nc|ENSG00000173638|P41440-2|SLC19A1', 'ENSG00000173638|ENST00000311124|SLC19A1'] 61878 22383 LLLFLLLWDWR True PC9_epitope_Rep2 1486.8700424066199 1486.8689499358602 91.59 2 -39.1406434689815 0.47090438521425143 1.0 ['ENST00000494187.1_1_7:30821643-30825836:+|nuORF'] 32867 20572 GILDFYILL True NCI_RA007_Epitope_Rep4 1065.61103375929 1065.60992993586 89.105 2 -40.58557840330989 0.47090438521425143 1.0 ['ENSG00000090402|ENST00000264382|SI', 'SI|p.P1140Lfs*44|1|0.11|ENSG00000090402|chr3:165019606-165019606|G/-|frameshift_variant'] 124871 8276 VLLLLLLPTL True PC9_epitope_Rep2 1106.76786875386 1106.76676993586 37.192 2 -40.84012418993231 0.47090438521425143 1.0 ['ENST00000319190.9_1_2:47168484-47168661:+|nuORF'] 29530 24323 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 105.52 3 -41.30670792653618 0.47090438521425143 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29529 24251 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 105.18 3 -41.311396729332564 0.47090438521425143 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29528 24176 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 104.82 3 -41.32019080680664 0.47090438521425143 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29531 24413 FVIFMFFLN True NCI_RA007_Epitope_Rep4 1176.6041745570399 1176.60253490379 105.95 3 -41.35814622807972 0.47090438521425143 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29550 26688 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 109.43 3 -41.547109909548695 0.47090438521425143 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29553 26979 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 111.06 3 -41.63627509545156 0.47090438521425143 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29551 26819 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 110.16 3 -41.644150689661686 0.47090438521425143 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 29543 18850 FVIFMFFLN True PC9_epitope_Rep2 1176.6041745570399 1176.60253490379 77.874 3 -41.75682845025232 0.47090438521425143 1.0 ['nc|ENSG00000104044|Q04671-3|OCA2', 'ENSG00000104044|ENST00000354638|OCA2', 'nc|ENSG00000104044|Q04671-2|OCA2', 'OCA2|p.L630V|1|0.2|ENSG00000104044|chr15:27951847-27951847|A/C|missense_variant'] 78933 8844 PFFFFEDYFY True PC9_epitope_Rep2 1420.6015912743997 1420.6004899358602 39.371 2 -43.97255560180967 0.4709099068073427 1.0 ['ENST00000545576.1_1_12:8756882-8757648:-|nuORF'] 29979 13346 FYEEWWFLVVI True PC9_epitope_Rep2 1529.75948889813 1529.75785490379 56.609 3 -44.94302240450046 0.4709154282851895 1.0 ['nc|ENSG00000069188|Q58EX2-3|SDK2', 'ENSG00000069188|ENST00000392650|SDK2', 'nc|ENSG00000069188|Q58EX2-4|SDK2']